Probe Probe_Sequence Probe_Type TargetID Target_Location Alt_Probe_Count Paired_Probe GeneID Chromosome Gene_Type Gene_Symbol Gene_Synonyms Description Transcripts NumberOfLoci Loci CodingPotential Transcript Locus CodingTranscript CodingLocus Gene Position Class_Code TSS Transcript_Length Number_Of_ORFs Longest_ORF_ID Longest_ORF_Length Transposon_Percent Number_Of_Exons Splice_Percent FPKM.1c.a FPKM.1c.b FPKM.1c.c FPKM.2c.a FPKM.2c.b FPKM.2c.c FPKM.4c.a FPKM.4c.b FPKM.4c.c FPKM.8c_tard.a FPKM.8c_tard.b FPKM.8c_tard.c FPKM.8c_tot.a FPKM.8c_tot.b FPKM.8c_tot.c FPKM.Blast_exp.a FPKM.Blast_exp.b FPKM.Blast_exp.c FPKM.GV.a FPKM.GV.b FPKM.GV.c FPKM.Jeune_blast.a FPKM.Jeune_blast.b FPKM.Jeune_blast.c FPKM.MII.a FPKM.MII.b FPKM.MII.c FPKM.Morula.a FPKM.Morula.b FPKM.Morula.c MainRNA_Refseq MainRNA_Symbol MainRNA_Desc MainRNA_Evalue MainRNA_Bitscore MainRNA_PercentIdentity MainRNA_PercentLength OtherRNA_Refseq OtherRNA_Symbol OtherRNA_Desc OtherRNA_Evalue OtherRNA_Bitscore OtherRNA_PercentIdentity OtherRNA_PercentLength Protein_Query_ID Protein_Uniprot_ID Protein_Symbol Protein_Desc Protein_Evalue Protein_Bitscore Protein_PercentIdentity Protein_PercentLength Max_Domains CNCI_Score GV MII 8c_tot 8c_tard FC_GV_MII PVal_GV_MII FC_tot_tard PVal_tot_tard Sequence Absolute_Closest Absolute_Orientation Absolute_Extremity Absolute_Distance TSS_Closest TSS_Orientation TSS_Extremity TSS_Distance EMBV3_32147 AGTGAGATCTACATTCACGGCTTGGGCCTGGCCATCAACCGAGCCATCAACATTGCCCTA Gene GeneID:617906|POP7:NM_001076482:320_cdna Constitutive 0 NULL GeneID:617906 25 GENE POP7 MGC152177 processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae) EMBV3_24185 CTGATGTAGTATGATAAAGTCAGCTTCTTGGATACAGACACACCCAGGGCAGCTGTCAGT Gene GeneID:539521|GNAI3:NM_001034677:164_cdna UTR3_Alt 2 NULL GeneID:539521 3 GENE GNAI3 MGC127972 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 EMBV3_00857 GAGAAATCCCTGTTGAGTAGTTCAGGACGGAGCCTTGACTATGGTGGTGCCAGTGTCAGT Gene BVT0102_190233 - 0 NULL GK000030.2:117955161-118112438 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30513 TCCTTGGAAGCTTTGCTCATGACTGTTCGGGATGAGTGTTACATGCTGGGGAGAGAGATC Gene GeneID:100299991|LOC100299991:XM_002685060:166_cdna Constitutive 0 NULL GeneID:100299991 1 GENE LOC100299991 NULL hypothetical protein LOC100299991 EMBV3_01749 CTGGGTTCACCAAAAACCCAAGTACAAGAATATGGCCTGTGTTGGAGACAGACAAAGTTG Gene GeneID:618192|HSD17B13:NM_001046616:37_cdna UTR3_Alt 2 NULL GeneID:618192 6 GENE HSD17B13 MGC137280 hydroxysteroid (17-beta) dehydrogenase 13 EMBV3_14947 CAGGCCCAGTGGTCAATACTTTCAGGCCAGGGTGTAGGACTCCAGAATAGGGAAAAGAGA Gene BVT0102_039290 + 0 NULL GK000014.2:64898582-64905619 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053691 TCONS_00053693 TCONS_00053692 1 XLOC_031803 Coding TCONS_00053691 XLOC_031803 Coding Coding GRHL2 14:64902740-64912046 j TSS39556 3147 4 TCONS_00053691_13 123 3 0.66211714132187 0 0 0 0 0 0 1.84886729772672e-06 0 1.50431540772602e-05 0 0 1.70432649189088e-05 0 0 6.34013813077138e-06 0.00210050607318773 0.000365611460131172 0.000171608768318587 5.0130490934644e-05 0 0 0.00185295516381927 0.00116664525771725 1.78248811577063e-13 6.60483022085768e-06 0 0 0.00020144086176176 2.25475030257246e-05 5.03995180115147e-21 XM_002692794.2 GRHL2 PREDICTED: Bos taurus grainyhead-like 2 (Drosophila) (GRHL2), 0.0 5517 99.97 0.972672386399746 NM_024915.3 GRHL2 Homo sapiens grainyhead-like 2 (Drosophila) (GRHL2), mRNA. 0.0 1231 70.58 0.848744836352081 0 coding 0 0 0 0 0.103720000066912 0.500136596054066 0.0325943051781234 0.583294901853399 GTAGTCAGAGTCCCAAACCTCACCAGCGCCAGCCGTTTGTGCACCGCCAGCCACTGGACTCAAGAGATTTCTGAGAAATATGGGCTGCCTGTGGAGAAGATAGCAAAGCTTTACAAGAAAAGCAAAAAAGGCATCCTGGTGAATATGGACGACAACATCATTGAGCACTACTCGAATGAGGACACCTTCATCCTCAACATGGAGAGCATGGTGGAAGGCTTCAAGATCACACTCATGGAAATCTGAGCCCCACTCTGGGCTGCAGCCCTCAGGGCCTTCCTCCCCCAGGGAAGTCGGAGGCCCCGGCCCCCAGGCCCCACAGACCCACCTCACCCATCTGACGACTGCTGTTACACGACTGTGCTGGGGAGCAGGGCGAGGCCCAAAGACCCTGGGATCCCTGCGTTTGGGCCACCCACCGGTTCCTGCCCTGGAGCCACGGCCCAAGCCCCTCGGGACGGGGCCTTGAGCTTATCACATCCTTATTTATTGTCCACCTTTTTTCCGGAGCCCGGGGCCCAGGGCCCGCCAGGACTCTGCAGGTCACTGCTGGCTCCAGCTGACATGGGCCAGAGCTCTCCCTTTCAGTCCGTTGATCCTGAAGAGCCTGAGGGAGCTCCTTCCTGCCATCTCACCCCTGATGTCTCCTGAGTGGCTGGACAGAATGAGCCGCTTCCTTCGTCTGAGGTGGGGGAAGAGGTGGACACCTCTTCCTGATCAGGAGCCTTCTGTCTGCTCTGAGGAAGGGCATTGGTGGGTACCCTCAGGGGTTCCTAGTGAGTAGCCACCAGGCCGTGTACAGGAAGACATTCGGCCACCGTGTAATTAGTAAGTAACCCCGAAAGTGTGCCTGGCTATCATGTACATAGTGTTTATAATATCGCAATAATATATTTCACCTGTGGTATGTGGGCATGTTTACTGCCGCAGGCCTGGGGGAGGCGCATACCTGGAGACCCTGCTTTCTCCAAGAGGTTTCTGCCTCCGTGCTGTTCAGAAGACATGCTGGGCAAGGGACACAGCCTTCAGGCTGTCAGGCAGTGGGTGCCAAGATGGTTGACCCCCGTGGGCATGCCTGAAGCCCCCCCCGTTCCCTCTCTATGGGCACTACCTGCCCCGGAGACCCACTGAGTTTGTCTCATGGTGATGAGCTTCGCCTGACTCTCCCTCTGAGCTGTCTGTGGGAAAGGTCGGATTGTCTGAGGTCCCAGCTCCTCCAGCTTTGGTGTTGGTGCCGCCTGAACTTTCTGGAGATGCCGCAGGGACTTGCCATCAGGGTTCCATCACTGGGTCTGCCGCAGAACTCCTGGGCTTTCGTGAGGAGCCAGCCACTGTGCAGTGTCTCAGTTTACAAGCACATCCTCATCTCAAGTGGCTCCCTGGAGGCCCAGCTGCAGTCCTGAGAGTGGTGCCAGCGGCTCAGCTCTGGCCTGCCAGGCATGGGCTGCCTTCTGGGGCTCAGCCGGCTCTGGAAGGCTGGGCTGCTGGATGCTGGATGGGTGCGAGAAGACCCCGGGAGCCCTGGCACTTCTGAAACCAGCGTCTGGAAGATGGAGAGAGAAGGCTTGTCCTCCTACCAGGTATCCTGGCAGATGAAGAGGAGATGAAATGCTTCCCCAAACAGTCGCATCATCATGTACCATCCGGACCACAGTTCTCTTTGAGGGACAGGTACATGGTCTAGGGGTTTGTGTTCAGCCTTGTGGGCTAAAGCATAGGTTTCTGGTAGCCACACTCCCTAGGAGGTCCCGGATCTAGGGCAGGTTCTATGGAAGGGCCCAGATTTGTTTGTAAAGCACTTTGATGTCTTACCTGGGGGCTTTCTCTCCAAGGGCTCCCTGCCTCCCTGCCCTCCGCGGCCCAGAGCAGGATGGAAGGGCCGCTTTCAGTCCAGCTCTCTGTCCTTGAGGCTGCAGAGGATTCAAATGGGCTGGAGGGCAGGTGCGTGCCCAGGAAGATCTCTAGTAGGTGTGGTGAGGGGGCACCTTTCTGTGTGTCTTCTGGACGTGTTACTCCTCCCTGTGGTGCCAAAGATTGCATCCTGGATTTAGCTCTGCTCCAGTCTGTCCCCTCGTCCTCCACTCTGTGACAGTCACATCCTGGACCAGCATGTGGTACTAATGGGACTCAGTATTGGAAACGCATGATGTACAATGTGCCACCATGCTCCTTGCCTAAGGGGTGATTTCAGACATCACTGCCAGGCCCAGTGGTCAATACTTTCAGGCCAGGGTGTAGGACTCCAGAATAGGGAAAAGAGAAAATCTTTGGCAGACATGGGTTCCCTGACCTTCTCTCCCCAGCCTCTGTGGACAAAATGTTTCTGGTCCTGCCCTAGGCAGAAGATGAATCCAAGATACTTTTGCCTTTGTCCCAGGGCCCTGGGCAATCATTGTGGTGGCCACTACCAGAACAAAGCGTATGAGGCCAGTGCCAGCAAAGGGTGGCACACAGTGTACCCTCCCATCCAGTCTGTCCCCATCTTACCACGTCCTCTCTGCACTCTCAGTGTGCCCGTGGCTTAGCTTCAGCGTGCCCTTCACTGTGTGTGTGAGCAGAGCTTTGATGAGCAAAATTGTCCAAGGGGAGAAAAAAAAACAAAAAACACTCCAGAGAAATAGGAAAACTTGCCTCCTCTTTTTTTTTTTTTTTTGGTTTCTTAATCAGACTCAAATAAATAAGCTTTAAAAATTCCATGTAAGATGAGGGACATATGCAACAAGTGTTTTTCTTATACTTACCCCAGATGCTTAGACTTTCTGGGAAATTGGGTCCGACAGAAAAATGCAGTCAGATGTCATCTTGGAATTGGATCCTAAAAGACTAAGGCATGTCCCAGCCCAGAAACTTAAGAAGCATGAACTGAATCAAACATTTATTTTCCTTCTTATTTAAAATTACGAAAATGCAACAGAAGCAGGGGGTTTGTGCCAAATTCTGCGAACAGCCCTTTCGTAAAGACAAGCAAAGGAGATTGCGAGATGGACAATTTGTGCTCATGTTTTTTTTTTTTTTTTTAAAAAGGCAAATGTAACTTAATAGTTTTGTAAATGGGAGAGGGGGAATCTATAAACTATAAATACAGTTATTTTATTTTTTGTACATTTTTAAGAAGAAAAAAAATAAATATTCATAATGTAAGAGTAA EMBV3_36104 AAGGCAACCGACAACCAAACGGAGGAAAAGGAAAAACTCCACGAGCAGCACCTCCAACAG Gene GeneID:617976|LDB2:NM_001046611:19_cdna UTR3_Alt 2 NULL GeneID:617976 6 GENE LDB2 MGC127025 LIM domain binding 2 EMBV3_42376 TTCCACAGGACGCAGATTCTCCAATTTGGGTTCCCGACAGATTGATTCGCCATGTCTCAG Gene BVT0101_066902 + 0 NULL GK000015.2:77965340-78044072 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151324 TCONS_00158138 2 XLOC_092086 XLOC_096592 Coding TCONS_00151324 XLOC_092086 Coding Coding LOC100848463 26:3500932-3505627 j TSS113146 4258 1 TCONS_00151324_8 573 0.988492249882574 3 0.0935236472092033 6.38497157534957e-07 9.34439720962374e-11 0 3.08929054193078e-06 0 0 1.9927984935308e-07 5.8129543985754e-11 5.33424886786815e-11 5.74245296292866e-05 3.20202431370111e-05 4.26110510683714e-05 1.79359699516495e-06 1.91886063095743e-05 6.15762087223399e-06 0.00314324251298465 0.000528707432154932 0.00147291554813594 0 5.09316312347925e-11 2.41997757377864e-11 0.000843459877437445 0.000588345607113441 0.00178516715189459 6.2335568404403e-11 4.78122966069216e-11 9.19926136226586e-07 5.4173986258545e-05 0.000119445354240024 0.000234390766414262 XM_003587864.2 LOC100848463 PREDICTED: Bos taurus uncharacterized LOC100848463 (LOC100848463), 0.0 1413 100.00 0.183654297792391 XR_245937.1 PPHLN1 PREDICTED: Homo sapiens periphilin 1 (PPHLN1), transcript variant 1e-12 80.6 72.22 0.033583842179427 TCONS_00151324_8 sp|P61565|ENK1_HUMAN ENK1_HUMAN HERV-K_12q14.1 provirus ancestral Env polyprotein; 4e-15 79.7 23.22 0.532286212914485 1 noncoding 1 1 1 1 -0.0774613251028843 0.655267742845618 0.0518664758800047 0.436785649051432 TATTGTGGTCAAATTCTGCATCATTTACCTTCGCATGTTTTGCTGAATTTTATATCCAGACATCCAGTTATTTTCCCTGTCAGATGTAAACAATCTCCTATTCCAAATGCTCAGATAGTTTTTACTGATGGGTCAGCAAACGGTAAAGCCTCCATAGTCACTAAAAATCACCAAAAGGTTTTAGAAACACGGGAAACTTCAGCTCAAAAAGCTGAAATAACAGCAGTCATAGAGGCTTTTGCTATGTTTGCAGATGAAGAATTTAACCTTTATTCTGATTCTCAGTATATTGTCAGGCTGTTTCCACACATTGAAACTGCGGTTTTGCCTGAAAATAAGACTACCATATTTCATTTGTTAAGTAATTTACAGCAACAAATTTGGAAAAGAAATAAAATATTTTTCATTGGACACATTCGGGCTCATTCCGGATTGCCTGGCCCTTTAATGCCTTTAATGACTTGGCTGACTTGTTAACCAGAAATGCAGTGGCTACGGTGATTGAGGAAGCCAGAGCCTCTCACTCACTTCATCATCAAAATGCTACCGCCTTAAGATATCAATTCCAAATTCCCAGAGAAACTGCTAGAGAGATTGTGCGCTCTTGCTTACACTGCCCCACTGTTTATAATAGTCTACCTATGGGAGTTAACCCTCGCGGTCTCAAACCTAACGTGCTCTGGCAAATGGATGTAACTCATGTCTCTTCATTTGGAAAACTTTCCTTTGTTCATGTAACTGTAGATACCTTTTCTCATGTTATTATTGCAACTGCTCGTACTGGAGAGGCAGTTAAAGACGTTATACAACATCTCTTTACTTGCTTTTCATATCTAGGTCTGCCAAAGGCTTTGAAAACTGATAATGCCCCTGCTTATACTTCTAAGTCTTTCCAGGAATTTTGTTTACAGTTTCAAATTAAACACAATACAGGCATCCCTTATAATCCCCAGGGACAAGCCATTGTGGAAAGAGCACATCAAACATTAAAGCTTCAAATTCAAAAATTAAAAGAAGGGGAGTTTAAGTATAGCTCTCCCCATCAAATCTTGCAACATGCTCTTTTTGTAATAAATATTTTAAATGCTGATTCGGCCGGAACTACTGCAATGCTTCGCCATTGGTGCCCGGAGCAATTGAATGCAAAGCCATTAGTCAAATGGAAGGACCTCCTCTCCGGACAATGGAAAGGTCCCGACCCATTGTTAACCAGCGGTCGAGGATATGCTTGTGTTTTTCCACAGGACGCAGATTCTCCAATTTGGGTTCCAGACAGATTGATTCGTCATGTCTCAGCCCCTCGGATACCGAACTCCACGGCTGCCACGACCCCGCAAGAGGAAGGGACCCCCTCTGCCTCCGCTTCCTCCACCAGCGCGGGAGATGTCGCCGACATCGAGACAATTGACTTCAGGGACCTCGGATGAGCAAGGAACGGATCCGCCCACCAAACAGATGTCTCAACTACACATACGGGACACTACTCCCCCTGATTCCCTGCGCCGCAGAAACATCCCAGGCCGCCCAACTCAGGCGACCCGGAATGCCCCCATACCCACATGGGGACAAATAAAAACACTTTGTCACCAGGCACGAGGAATGACTTCCTCGCAGGGATCTCCAGCTTCTCCTGAGAAAATGTTTATTGCCATGCTTGCCTTGCTTTCCTGCCAGTGGCCGCTTGCCCGGATCCGTGACCCTTATGTGACCCTGCGTTTTACACCCCCTCCCGGTTATCCAGAGTGTTATAAGGTTGCTCCTTCAGATGAAGTGTGGAAGACCATAGATGGCCGTACTGGGTATCCGACTTGGACAACTTGTACTTATAGTTCAAGGATCAATTATAGAATACCAGGCGGTGGGAATTATACTATTCAGGATTGGAGCAACCCGAATCCGGGTGAAGATCCATTGATCAAGAAAACATTTAAAGGCAGATTCGAGAATTGGAATAGGATTCCTCTCCCTTGGCCTGCGCAAGCCACTAGATGGCACATTAACCAATTTGTTCCTCCCATGCTGTCTTATACAACTAAAAGCAAAACCTATTGGCAGCCTGAGATTTGGAGAGCCCTTGCTGCTTCTGAACCCGTTTCTTTATCTCGCCCAGATAACGATTCCACTTATTCTGTTTTAGCGTGTTTACCCTCACCTTATGTTTTCCTTTTTACTAATGACTCCAACAAACTTAATGTACGCATGAATTATTCAGGTGGACCTAACGTGGTGACTTGTGAACAATGTATGCTTTCATCCTGTTTGACCCCTCAATATAATGTTTGCTCTTTTGTGGTGTTGCGACGCTCACCCTATCTCATGATACCCGTGACAGTGACCTCCCACTGGTATGACAATTACGGTCTCGCCGTGTTACAACAACTACAGGATTTAATGCGATCACGACGGTTTGTGGGCTTACTTATTTTGGGAATATCAGCTTTAATAGCAGCAATTACAACTCAGGAAGCTATAGATAGGAAATTAGAGATGAGAGTAGATGCCTTAGAAGAAGCAATTATGCATATTGGGACTGAGTTACAGGCTTTGAAGGTGAAGATGGCTTTGACATGCCACGCTGATTACAGATGGATATGCGTGACATCTTTGAAAGTAAACGAGACAGATTATGAATGGGAAAAGATTAAAAATCATATCTCAGGTGTTTGGAACAGTTCTGATATTGGCCTGGACTTAGGGAAACTTCATAATCAAATACAGACCTTGGAACACTCTCGACTGGATTTTACTGCCACTGGAGCAGCTAATGACTTTTTTCACACCTTCTCTAATTTTATTTCTGGAAAAAATATTCTGTCTAATATCCCTGGTTATGTTGTTTTTGGTGCTCTAATCCTACTTCTCATAATCACTCTTCCTTGTATTGTCAGGATTCTTCGGCAGAGCATTCGGAGGCTCGCGACTGAGCTGCATCTGGCTGCTTTAAGAAATAAAAAAGGGAGAGATGTTGGGGGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAAATCCTCGAGCGTCTACCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCTTACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTCGGAGAAGGAGTTAACCTAGAGCTCCAGTCAATAAAAACTCTTGGGTGTGGCAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTGGCCTGCCTGACAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCATGAGAGGCACGAGATGCTTTAAACCTTCTAAAAACAGGTTCCTTAGAAAAGTTAGAAAACTATTAGTATAAGTATAATGGGCTAATTAGAAATTGTGTTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCACATCCCCTGCCCTTACACACATTAATGAATATATAGAAGAAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAACTAAAACCCATTACACCCTCACCCTGTAGGAGTGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCAAAATACTGGTCTCCCCATGTCTCTCTCTCCCTCTGGCTGAGTCTCCATCTGGAGCGCGGAACCCACCAAGCTTACTAATTTTGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAGCTTCTTGTCTTGAAGTTTTATTGGTCCCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTAGTCTATTACTCTTTATATCTCTAATTAATATCTAATTGAAACTATCGTATCCTGACCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCTGGGGCTGGTCCCCGGCAGT EMBV3_24732 GTCATCAGCAATCCCTGACACATAGGTCTCAAACTTTAGCCTCTTGACGTAGCTGGCAGC Gene GeneID:530164|SLC17A5:XM_002690013:42_cdna Constitutive 0 NULL GeneID:530164 9 GENE SLC17A5 NULL solute carrier family 17 (anion/sugar transporter), member 5 EMBV3_01765 GTAGTGGGAAGGACAGAGAAGTCCAAAGAGAATGTCAGGGATACTGAAGAAACAGCAGAG Gene BVT0101_016045 + 0 NULL GK000004.2:108922092-110897399 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190142 1 XLOC_116177 NonCoding TCONS_00190142 XLOC_116177 NonCoding NonCoding - 4:109136869-109138460 - TSS142510 1591 1 TCONS_00190142_2 63 0.760527969830295 1 0 9.40683001331845e-05 2.52631095773771e-05 6.39811447332434e-05 9.39501555015265e-05 0.000133437353241567 7.86905925408199e-05 0 3.71760536238191e-06 6.94291681968519e-05 0 0 0 0 0 0.000863442047917321 0 0 0 0.000477762085563985 0.000406807433870471 1.90806148918657e-06 0 0 0 0.000204675395301541 0.000389692297376533 7.36536616440134e-06 0 0 0 NM_001102539.1 ZFP30 Bos taurus zinc finger protein 30 homolog (mouse) (ZFP30), mRNA. 6e-114 416 94.07 0.169076052796983 0 noncoding TCTCCCCTCCTCCCCAGGAGTGAAGATCGCTGTCATGTCCTGCCCTGCCATCTCCCACCGCCAGTTGCAAAGGATGGGGAGTTGCTCCAGAACCTTCTTCAGACCTGTAAATCCCCTCAACCATTACCACTGATGTCTCTGTTGCTGACTCTGAGCTCTTTCTTTAGTCTTGAAACTGGGCAAGTTCAGGGTCCATGGAGTGCAGCTCAGCCTCGCCTAAAAACCATTCAGTAACTTGAAGGTACAGACAAAAATATCCACTGTGTAAATAACAGCAGCAGTATCATTGGAGCCCCTGATGCTATGACCAGGCTGCAGGCATGGGGAGTATGAGAAGATAAGGTGAATGCAAATAGAAGACTGAGAAGCTAAGGACAGGGACCAAGCACAGTCAAAATCAGCCCTGGAAAGCCCAACACTGAGTGTTCAAATACTAGGCACAGCACTGGTTACAAGCAAGGGTCTCGAGAGTGTGTGAATCTGAATGGCTTCATCAGAAAAGCAGTATTTCCAAGTTTCTTTGTTTAGTCACTCAGTCATGTCCAGCTCTTTGTGACCCCATGGACTGTAGCCCACCAGGCTCCTCTGGCCATGAGATTTCCCAGGCAAAGAATACTGGAGTAGATTGTCATTTCCTTCTCTAGGGGATCTTCCTGGCTCAGGGATGGAACCTAAGTATCCTGCATTGGCAGGCAGGTGCTTTACCACGGAGCCTCATACTGGAATGGGTTGCCATTTCCTTCTCCAAGGAATCTTCCAGACCCAGGGATCAAACCCAGGTCTCCCACATTTCAGGCAGACGCTTTACCCTCTGAGCCACCAGGGAAGCCCACCATGGAGCCTCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCTGACTCCGTGCGACCCCATAGATGGCAGCCCACCAGGCTTCCTCGTCCCTGGGATTTTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGACAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCTGCCTCTTCACGACCCCATGAACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTTCTAGGCAAAAGTACTGGAGTGGGGTGCCATTGCCTTCTCTGCCACCAAGCCTCAGGAGAAGGTAAATAGGAAGGGTGGGAGGACTTCCCTGGCAGTTCAGTGGTTAAGGATCCACGCTTCCACTGCAGGAAGGATGTGTTCCACCCCTGGTCAGGGAACTAAGATCCACATCCCCTCCAGTGTGGCAAAAAAAAAAAAAAGAAAGAAAAAGGAAAGAGGGTGGAGGCATTCTTTATAAACATGTAGTGGGAAGGACAGAGAAGTTCAAAGAGAATGTCAGGGATACTGAAGAAACAGCAGAGAACCACATGAAAAACCAACTTGCCTCTACTGCTCACCATGTTGTCCAAGAATGAAGTTGCCCTTCCCTTTAGTAAAAGGCAGTACTTTTGATCAAGAAATTCTGTCCATAAAATAAATTGGAACAAGAAAAAGCCTATCGCATCCATACAGAGTTGCAGTAAGAAGAGAAAATGAAAACCTAAACACTAAAGCTGTTGAAATTTCCCCCACAAAT TCONS_00185284 TCONS_00185285 TCONS_00185288 TCONS_00185289 TCONS_00185291 TCONS_00185293 TCONS_00185294 TCONS_00185295 TCONS_00185299 TCONS_00185300 TCONS_00185301 TCONS_00185303 . 5' 214779 TCONS_00185284 TCONS_00185285 TCONS_00185288 TCONS_00185289 TCONS_00185291 TCONS_00185293 TCONS_00185294 TCONS_00185295 TCONS_00185299 TCONS_00185300 TCONS_00185301 TCONS_00185303 . 5' 214779 EMBV3_32921 GACGCTTGCCTGGAAAGGCCAGGGGCTCCGAGTGGGGCCGCATGAAGCCGCCAAAATCCT Gene GeneID:100296270|LOC100296270:XM_002685801:696_cdna Constitutive 0 NULL GeneID:100296270 2 GENE LOC100296270 NULL hypothetical protein LOC100296270 EMBV3_36828 CAATCGCAGGAAGCAGCTCACCTTCCACCGCTGGTGAGGGAGAACACGGACCCTACCGGC Variant GeneID:508138|THAP3:NM_001075347:76_cdna 79^271 1 EMBV3_01589 GeneID:508138 16 GENE THAP3 MGC142506 THAP domain containing, apoptosis associated protein 3 EMBV3_41225 AGCCGCAGCTTGGAGACTCGTCCCCGTTTCTTCTTTGTGGCATATGTGGAATATTGTGCG Gene GeneID:100140139|TMEM196:XM_002686685:97_cdna Constitutive 0 NULL GeneID:100140139 4 GENE TMEM196 NULL transmembrane protein 196 EMBV3_28875 GATGCTTATTACAAGGGAGGGTTTATTCATCAGAAGCCAGAGTTGTGGGAGCAGGGGTGG Gene GeneID:100124502|KCTD7:NM_001102545:185_cdna Constitutive 0 NULL GeneID:100124502 25 GENE KCTD7 MGC139027 potassium channel tetramerisation domain containing 7 EMBV3_39264 AATGCTCTCAGGCAGTGGGTGACAATCTTAGACGGACAGCTGCAACACTTCCAAAATGCC Gene GeneID:100336522|LOC100336522:XM_002698889:27_cdna Constitutive 0 NULL GeneID:100336522 28 GENE LOC100336522 NULL collectin-46-like EMBV3_16426 CTAAATGACAAGGGCTATGCACTGGGGAAGCTATCAGATTTACTTCAAAGCAGCTAAAGC Gene BVV0102_168727 + 1 EMBV3_35460 GK000030.2:55038298-55090124 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251086 1 XLOC_154029 NonCoding TCONS_00251086 XLOC_154029 NonCoding NonCoding - X:55040424-55041673 - TSS188307 1249 1 TCONS_00251086_2 60 0.352281825460368 1 0 0 0 0 0 0 0 0 0 6.31716572687585e-06 0 0 0 0 0 0 0.000486362085917531 0.000372187657471135 0.00136603754959706 0 0.000184247981267239 0 4.75302962674325e-05 0.000389291658828964 0.000563743167135527 0 5.64088014947694e-06 9.3821478334025e-06 7.69029210012582e-06 0.000322603914572119 7.22047565162567e-05 0 noncoding GGGAGGGGAGTAAAGGATGACACTTAGTTTTTTGATTCAGCAACTGGGTGAATGCTGGAATGGAGAGATGAGGAACAGATTTGAAGGAGTGTGGAGTCATGAGGGTGTTTTTGGTCATGTTAGTTAGGAGATGCTAAATAGGCAGTTGGATATCCAAATCTAGAATTCAGGGTACATTTTGATTCTGACAATTGATTTGGGAGTCTATTTCATGGCCATGATATTGGATGAGATCACTTAGTACAGCTTGCAAAGAGAAAATGGCAAAGGACTAAACCCTGGAGCATGCAAATATTAAGAAGTAGAGAAGAGGAGGAACCAGCAAGAGACTGAGAAGTACTCACTAGTGAGCTAGAAGAAAAGTTAGAAGACTGATGTGCTGGAAGCCAAGTAAAGAAAATGTTTCAAAAAGGAGGGGATATTTAATGGTATGGAATGTTGCTTACATATACCTGGATAAAAGAAGCTTTAGCTGCTTTGAAGTAAATCTGATAGCTTCCCCAGTGCGTAGCCCTTGTCATTTAGAAAATTTGCTTTTAAGTTCGTACTCCAAGTAACTTCCCATATTGTTTTTCACAACATATTATTTTGGTCCTTAAGATCATGTAGGAGTTTAAATTGTGAGAAGGGGTTTGATTAGTTTTTATGAAAATTTAACCCCTAACAATCTCATATCATGGAAGAAACTTCTCTAAACTTGAGTTTATATTCTGGGAGAAAAAAATTTTTCCCCTTAGTTTGTGTTTTTGTTCAATAATTATTCCCTGGGTACTTCTTTGACCATATTCTTCTTGATCAATTATTTAACACACTTAAAATTAGATATACAGCTGTGCAAATATGCCAAGTCTAGTTATTTGAAAAGTCTTTTGAAGAATGTTCACGGCAAAGAAAAACAAGAAAAACAAAATAAGAGTATTTGCTTGCATGCAAAACATGTCTAAGAAAAGAAATAGAAAGTGTGGTTTGTTTTCCTAATTGTACAAAAAGAATTCCAAGTATTTGTGTAAAATTGCTGATGTTATAAATATTGACTTAATATTCAATAACAATGCTATTAGATTTCCAACATTTTTTTATCATAACTTCTTCGTCTGGTCTTGGGGACAATCTGGAAAGAAAAAATGATAACTATGGTGCCTCATAAACTTTTATTAGCATAGTAGAAATTCTCTTTATATCAGTTACATTTTATCACAAAATAGTTTATTAGAAGAAAAATTATTCTCTAAAATTTATATATATATAT TCONS_00244424 TCONS_00244425 TCONS_00244426 TCONS_00244427 TCONS_00244428 TCONS_00244429 TCONS_00244430 TCONS_00244431 TCONS_00244432 TCONS_00244433 TCONS_00244434 . 3' 2128 TCONS_00244424 TCONS_00244425 TCONS_00244426 TCONS_00244427 TCONS_00244428 TCONS_00244429 TCONS_00244430 TCONS_00244431 TCONS_00244432 TCONS_00244433 TCONS_00244434 . 3' 3376 EMBV3_27657 GAGTAAGGCTGCTAACTTTTCGTTCCTTGCCTGGTTTCGTTCTATGAGGTGCACAGGCAC Gene BVT0102_072941 + 0 NULL GK000013.2:79448506-79479043 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044148 TCONS_00063141 TCONS_00044150 TCONS_00044151 2 XLOC_026128 XLOC_037868 Coding TCONS_00044150 XLOC_026128 Coding Coding PARD6B 13:79433477-79450702 = TSS32508 3652 1 TCONS_00044150_3 373 3 0.788144449605202 0.00431685432856758 0.00459981771401429 0.00253007910254375 0.00235892984607613 0.00376164840704923 0.00133298796494278 0.00374983530930648 0.00241649806792032 0.00248802130549668 0.000733211838184843 2.20241542405252e-08 0.000411308820314608 0.000234932997192233 0.000500781351982503 0.000617208776326898 0.00707833779337694 0.00446327612111983 0.00254415244417271 0.00172757058217277 0.000712298343151895 0.000837307725895556 0.00389442860160662 0.000411775776086157 0.00471104443253071 0.00254793529716025 0.00200562083173481 0.00223708333910707 0.000302457018227661 0.000277689266526304 0.000114736529562042 NM_001098104.1 PARD6B Bos taurus par-6 partitioning defective 6 homolog beta (C. elegans) (PARD6B), mRNA. 0.0 2608 99.79 0.398138006571742 NM_032521.2 PARD6B Homo sapiens par-6 family cell polarity regulator beta (PARD6B), 0.0 1611 80.74 0.476177437020811 TCONS_00044150_3 sp|Q9BYG5|PAR6B_HUMAN PAR6B_HUMAN Partitioning defective 6 homolog beta; 0.0 662 89.01 0.997319034852547 2 coding 0 0 0 0 -0.321812868720644 0.316417556565354 0.0258711346265235 0.603589471319314 GAGGAGCCAGCCGAGCGGGGCCCGGCGCGGAGACGCGAGCCGCGGCCGCGCCTCTGCAGGTGCCTGTGAGGAGGAGCCCGGGCCGCCGCCGCCGCCGCGCCCCGAGCCCGCCGGCCGCGCACTCGGCCCGCGCGCCCCCGAGGGGCGGCCCGGCTGGAGGAGGCCGCCGCGGGCCCGGCCTCAGGATGAACCGCGGCCACCGGCACGGGGCGGGCAGCGGCTGCCTGGGCACCATGGAAGTGAAGAGCAAGTTTGGAGCTGAATTTCGTCGGTTTTCGCTGGAAAGGTCAAAACCTGGAAAGTTTGAGGAGTTTTATGGATTACTGCAACATGTTCATAAAATACCCAATGTTGACGTTTTAGTAGGCTATGCAGACATCCATGGCGATTTACTACCTATAAATAATGACGACAATTATCACAAAGCTGTTTCAACGGCCAACCCACTGCTTAGGATCTTTATACAGAAAAAGGAAGAAGCAGACTACAGTGCCTTTGGTACAGACACACTAATCAAGAAGAAGAATGTTCTAACCAACGTGTTGCGGCCCGACAACCACAGAAAAAAGCCGCACATCGTCATTAGCCTGCCGCAGGACTTCCGACCTGTGTCTTCCATCATCGACGTGGACATTCTCCCGGAAACGCACCGCCGGGTGCGTCTCTACAAGTACGGCACAGAGAAACCGCTGGGCTTCTACATCCGGGACGGGGCCAGCGTCCGGGTGACCCCGCACGGCCTGGAGAAGGTCCCGGGCATCTTCATCTCCAGACTCGTGCCGGGGGGCCTGGCTCAGAGCACGGGGCTGCTGGCTGTCAATGACGAAGTCCTGGAGGTGAACGGCATCGAAGTCTCCGGGAAGAGCCTCGACCAGGTCACCGACATGATGATCGCCAACAGCCGCAACCTCATCATCACCGTGCGGCCGGCCAACCAGAGGAACAACGTCGTCCGGAACAGTCGGACTTCGGGCAGCTCTGGCCAGTCGACCGACACCAGCCTCCCCAGCTGCGCGCCGCCGCCGGAGCCCAGCCTGGAGCCGGGGGAGGATGACAGCGACGACGACGAGGACATCGTCATCGAGGACAGCGGGGAGCCGCGGCAGATCCCCAGGGCAGCGCCCAGCGCCGAGAGCCTGCAGTCGCTCACGCAGGTAGAGCTCAGTTTCGAATCTGGGCAGAACGGTTTCATCCCTGCCAACGAAGTGAGCTTACCACCAGTAGCGAGTGGCGCCGGCACCGAGTTCGAAACGCGTGCTCCAGATCAGAAACTCTTAGAGGAAGATGGAACGGTCATCACACTATGAGACCATCACGGCTTGAATGTCTTCTGAACGAGGATGCCACGGAGACTCTCTGTAAATTTGGCTAGTTGCAAGCATTATATACCTCTGAACAAGTGATCTGGGATAGGCATGAAAAAAAAATAAATATATATATCTCGCAAGCTTAAAATGTTATTGAAATAGTAGTTTGATAATTCATATAAACTTTGGTGGGTTAGAGGTAAATTCAAGTCTAAAACAAAGGGGCCTTTGCTACTGAAATGATGTGCTTTTGCTATTTTGTCTATAGAGAACTGGATGTTAGCACATTTCCCAGAACTAAACACCCTAAGGACTAGATCATTTCCGTTTGAAGTGGTTGCATATTTAACCTGCTGTGCAGAGCCTGGTTAATTTTTCCCTTAACTATATTTTTTAATTTCTAATGTGAAGAAGTCTGTCAATTCGGTAGTTTGGGGACCTTGGCTCCTATATGCCCATATTTTATTTTGACTTTTTAAATGTTGTTCCTCTGTTGCTAATTGTAACAGTTTTTCCAAATGCTTCCCCGCCTCGCCTCATTTTCTAAGAAATCAAACCAACTGTTTTTTAGGGGCTGCTTCAACTTACAAAGCGCTGAAGCAATGTTCCTGAATTAAGAAACTGTTAACAATCGATCAGATCTGCGTTTGTCCCTCCTGTGACTTCCACATTTACAAACTCATTCCATTCAGGCATCCCTTAGATGTCATGAAAGGCAGTTCCATCGCCCCTGCTGATGTGGGAGACTCTCTCCCATGTCTTCTTGTCCTCATTCTGAATCTCATTGGAAATCATTCCTTTCTTGTTTGTGTATTTTGTTGGTCTGCTTTTATACCCTTTTAATGTGTTTGAGTAGTGTGAATGATTTTCATTAAAAAAAAAAAAACACCCAAACTAAGAGATTTTTATACACAGGACAGCCTTGTGCACTTTTTATATGAAAGTTTTGGGTTTTCCTTAGTGGGGTTTGTAGGAACACTGCCTACACTTTATGGAAAGCATGTAGTATTCACCTTTGACAGGTAGAGTGTATCTCGATTAATGTTAAGAGGCTATTTATTACTTTGTGATGCATCCACTTAGAACAAGGTAAGAGTAAGGCTGCTAACTTTTCGTTCCTTGCCTGGTTTCGTTGTATGAGGTGCACAGGCACTACGTAGCTTGTATATAAAGACTGAGAATAGTATGAACTACGCGAGTTCCCTGGCTTACGGATGTTGCGCTCAGAGTTATTTATTGATTAATTTTATGGTAGGGCTAGAATGGATACCTTATAACAATTGTGTGCTAGTAAAACAATGAAGAATCGAATGACTCCGTTTTGAAGGATGTTTTCTATGGTAAAAGTATACGAAGTAAAGTTGATTAAATGAAGATCACTGGACTCAGAATACTTCAACGTATTTTGTTCACATTGTACCACTAAACATTATCACTAAACCATTAACTGCACAATGTTAGGTAACACCGTGTACTTTTTGTTGAATTCATAGAAATTCTTCCACTTATTTAACCACTATTTTTTAATGGCATTCCAGGTTTAACATTCTGTTGAGTTTTACAAACTTAACTCTTGAATGGCAAAATGTTAGTAAGTAGAAGGTTACATTTCATTTATATTATGAGCGGTGCAGGGGTTCAACATTTTAAGTAAAAATACTTTCACATACTACCTCTCTTTCTCTCTGTCTCTCTTTTTTTTAACAAAGTTTTAACATCAGAACTGTTCTCTTAGGGGAAGAAATACTTCAGGGCTTGACTTTTTGAACAACTTTTAACTGTAAAAATATAGATCTGTCTTGTATGTATTCATGAAAATGGAAATCAAAGCTGCTAGTGCTTCTTATTTTAACTGTCCCCCCAGAAGTATATGTCAGTGGTCTTTTCAACTGGATCTCTCATTGAAATTATTGGTGAAGTGATTGATTACTAGACATATTGTAAAACCAACAGATCTTGGTTATACAATAAAACGTCAATTCATTGGTAGTCTGAATTGTTTCAAGTGTACCTTATTAACAAAAATATCCGTGGATTCACCTTAAAATTTTATAGTACTAAATGTCAAGCTAACTGTGAATTTTGTTCTGTATCTTAAGTAAGTTTATGATAATGTCCTCATGAGCTATCAACAAAATATATGTACTTTTGTGAACTATGAATTTTCTAATTAAATTTTACATGCAACATGATTTTTACATGAATGATACTTTGTTTAAACTATCAAATGTCAGTATTTTACTACAATTTTATTATAAAATGTACATTATCACTAAATGAACTTTGATTTTAAAAATCAAATTAGCTTTAGTTGTATATTATTTTTTACAAATAAAGATAGACTT EMBV3_29202 AAAGATGCCTTGAAACCCATTTAGTCCTGTGAACTCTGCTGGCTTCAACTGTACCAGAGG Gene GeneID:100141020|KRTAP27-1:XM_002684597:38_cdna Constitutive 0 NULL GeneID:100141020 1 GENE KRTAP27-1 NULL keratin associated protein 27-1 EMBV3_27752 GGGTATCATCTACAGTGACCCCCAAAATGCTGGTCAACTTCCTGGGCAAGAGTAAGATGA Gene GeneID:783843|LOC783843:XM_002684689:74_cdna Constitutive 0 NULL GeneID:783843 1 GENE LOC783843 NULL similar to olfactory receptor, family 5, subfamily H, member 2 EMBV3_23650 AACTATCAAATGCACAGAGTAGATGGACAGCAATCTGGTTCCCCCACTGCAACAGCTTTG Gene GeneID:508781|FMO1:XM_002694017:150_cdna Constitutive 0 NULL GeneID:508781 16 GENE FMO1 NULL flavin containing monooxygenase 1 EMBV3_18765 GGATCAGCGAGCTTCCATCATCCAGAGGTTTCGGGACGGAAAGGAGAAAGTCCTTATAAC Gene GeneID:508962|DDX25:NM_001038517:11_cdna Constitutive 0 NULL GeneID:508962 29 GENE DDX25 MGC133981 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 EMBV3_42734 GCCCCTGTGCTTAGAATATTAGTTAGGATCCCTCCTCAAGCCGAGAAGATCCCTTTTAGG Gene GeneID:528555|CASQ2:NM_001035374:59_cdna Constitutive 2 NULL GeneID:528555 3 GENE CASQ2 MGC128222 calsequestrin 2 (cardiac muscle) EMBV3_24942 GGGCAGCAGCACCACACTCGAACTCGAAGACATCTGTTCCTTTAAATGCTGTTTTCAGCC Gene BVT0102_043470 - 0 NULL GK000018.2:35732177-35734986 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086112 TCONS_00082971 TCONS_00086113 TCONS_00082970 TCONS_00082966 TCONS_00082969 TCONS_00086114 TCONS_00082965 TCONS_00082973 TCONS_00082964 TCONS_00082967 TCONS_00082963 2 XLOC_052044 XLOC_051153 Coding TCONS_00086114 XLOC_052044 Coding Coding ESRP2 18:35732334-35741010 = TSS64138 5275 1 TCONS_00086114_4 717 15 0.393659942363112 6.72781198401516e-173 1.20473433624071e-10 2.97649777969795e-11 2.86048022518897e-79 0 9.80539936314985e-127 1.80340520494736e-104 1.38263971275638e-05 2.60715748794874e-271 4.50115711007898e-05 4.33985554502189e-24 7.25405833823306e-08 4.55967983738435e-285 2.88026616668487e-05 1.21106694175084e-12 0.00608962924591594 0.00593345644863529 0.00551693322636818 2.98840123296881e-05 3.68450773888051e-10 1.44987132233022e-10 0.00129276473886286 0.00239281150646435 0.00293605220571298 4.80223063548415e-116 7.38019824867663e-70 1.58044430366162e-68 8.78731965154533e-05 7.94686946788075e-05 0.000363081921113131 NM_001205685.1 ESRP2 Bos taurus epithelial splicing regulatory protein 2 (ESRP2), mRNA. 0.0 4722 99.92 0.497061611374408 NM_024939.2 ESRP2 Homo sapiens epithelial splicing regulatory protein 2 (ESRP2), 0.0 4477 86.12 0.724549763033175 TCONS_00086114_4 sp|Q8K0G8|ESRP2_MOUSE ESRP2_MOUSE Epithelial splicing regulatory protein 2; 0.0 1316 94.14 0.97489539748954 2 coding 0 0 0 0 0.0313405152083869 0.771938285369538 -0.0150832496019474 0.7507347315178 ATGACTCCGCCGCCACCCCAGCCGCCGCCCCCAGGCCCGAACCCCACTGCAGACTCCGCTGCCGACCCCCGTCCCGGGCCTGGACCCCTGGTCGTACTGTTCGGGGCCACGGCCGGTGCGCTGGGGCCGGACCTGGGTTCCGACGAGACCGACTTAATCCTCCTAGTCTGGCAAGTGGTGGAGCCGCGGAGCCGCCAGGTGGGGACATTGCATAAGTCACTGGTTCGCGCCGAGGCAGCCGCGCTGAGCCCTCAGTGCCGCGAGGCGAGCGGCCTGAGCTCCGACAGCCTGGCGCGGGCCGAGCCGCTGGACAAAGTGCTGCAGCAGTTCTCACAGCTGGTGAGCGGGGATGTGGCTCTGCTGGGCGGGGGCCCCTACATGCTCTGCACTGATGGGCAGCAACTGTTGCGACAGGTCCTGCACCCTGAAGCCTCCAGGAAGAACCTGGTGCTCCCCGACACCTTCTTCTCCTTCTACGACCTCCGCAGAGAGTTCCACGTGCAGCACCCAAGTGCCTGCTCTGCCAGGGACCTCACCGTGGCCACCATGGCACAGGAGTTGGGGCTGGAGACAGATGCCACAGAGGATGATTTTGGGGTGTGGGAAGTGAAGACAATGGTAGCCATCATCCTGCACCTGCTTGAAAGTCCCAGCGGTCAACTGTTTGTGAAGCCTGAAGGGGTGAAGCAGAAGTATGAGACAGGGCCTTGCAGCAAGGCTGACGTGGTGGACAGCGAGACTGTGGTTTGGGCTCGTGGGCTGCCTTGGCAGTCATCAGACCAGGACGTGGCTCGATTCTTCAAAGGCCTCAATATTGCCAGGGGTGGTGTAGCACTGTGCCTCAACGCCCAGGGCCGCAGAAATGGTGAGGCCCTCATCCGTTTTGTGGACAGCGAACAGCGGGACCTAGCGCTGCAGAGACACAAGCATCACATGGGCGTCCGCTATATCGAGGTGTATAAAGCAACAGGAGAGGAGTTTGTGAAGATCGCAGGGGGCACATCACTAGAGGTGGCGCGTTTCCTGTCACGGGAAGACCAAGTGATCCTGCGGCTGCGGGGACTGCCCTTTTCGGCTGGGCCAGCAGACGTGCTAGGCTTCCTGGGGCCAGAGTGCCCAGTGACAGGGGGCGCTGATGGGCTGCTCTTTGTGCGCCACCCTGATGGCCGGCCCACGGGTGATGCCTTTGCCCTCTTCGCCTGTGAGGAGCTGGCACAGGCTGCGTTACGCAGGCATAAAGGCATGCTGGGTAAGCGATACATTGAACTCTTCCGGAGCACTGCAGCTGAGGTGCAGCAGGTCCTGAACCGCTACGCCTCCAGCCCACTCCTTCCCACCCTGACTGCTCCACTGCTGCCCATCCCCTTCCCACTGGCAGCTGGGACCGGGAGAGACTGTGTACGCCTGCGAGGCCTGCCCTACACAGCCACCATTGAAGATATCCTTAGCTTTCTGGGGGAGGCAGCAGTTGACATTCGGCCTCATGGTGTGCACATGGTGCTCAACCAGCAGGGCCGGCCGTCAGGTGATGCCTTCATCCAGATGACATCAGCAGAGCGGGCCCTAGCTGCTGCTCAGCGCTGCCATAAGAAAGCAATGAAGGAACGCTATGTGGAGGTGGTCCCCTGCTCCACAGAGGAGATGAGCCGTGTCCTGATGGGGGGCACCTTGGGCCGCAGTGGCATGTCCCCTCCACCCTGCAAGCTGCCCTGCCTCTCACCACCCGCCTACGCCACCTTCCAGGCCACCCCGACCCTCATTCCCACTGAGACAGCAGCTCTGTATCCCTCTTCAGCACTGCTCCCAGCTGCCAGGGTGCCTGCTGCTCCTACCCCAGTCGCCTACTACCCAGGGCCAGCCACTCAACTCTACATGAACTACACAGCGTACTACCCCAGCCCCCCCGTTTCCCCCACCACTGTGGGCTACCTCACCACACCCCCTGCAGCCCTGGCCTCTGCTCCCACCTCCGTGTTGTCCCAGCCAGGAGCCCTGGTCCGTATGCAGGGTGTCCCATACACAGCTGGTATGAAGGATCTGCTCAGCGTCTTCCAGGCCTACCAGCTAGCCCCTGATGACTACACCAGCCTGATGCCTGTTGGTGACCCAGCTCGTACTGTGCTACAGGCCCCCAAAGAATGGGTGTGTTTGTAGGTGAGGGAGCCAGGAGGTAAGAGCTGACTGATGTCCTAAGCTAATGGGACTCTCCTGTCTCCAGAGAACCAGCGCCCTCAACCTGGTGGCTTCTTTCTGGCTTTTCAAAATTCTCAGAAGGCCCCCAGCGGAGATCAAGCCCCAGCTCCATCCCCCAACTTATTGCTCTGCCTGTCCACCTCAGAGATGACGGCTGGACCCTGCATGCAGGGCTGGGGGTGGAATGGCACTACCCTGCTCCCAGTGGTCGGATCTGGGCTCCTTAAGTAGCACCCAGAGAGCCTTTGTTCTGTTCTGGCTATGGCCTGTGCCTACAGGTTCCGGGGGGCTGATGTCCACAGCAGGCTTGGTTTCTTTAAAAAAAAATGTAAGCCCTGGTGCTTTCAGTGTATGACTCCAGGGAGCTTCTTTCTGAGTAAAGATACCAGTGTCCTACCTTCCCGTCCCTTCTGATGGGGTGCAGGGCAGCAAAGAGTGCTGGTCCCACTCCCCAGGATACTTGGACCTCAGTGACCACATTGTGCCAGGGGTGGTCCCACCTAAGGATGATGGCCCCCCTGGAGCCTGGCACAAGGAATAGCAGATGGCAAAAATCACAAAGAGTTTTGATGGACTGTACTGCAGTATCCCCAGAGGACACTAGGGGGCAGAAGGCCCCCACAGAAAAACTCAGGCTTGACTTATAAAGGGACTTCTGCCTACTTTTCATGCACACTTTGGGCAGGTCAGTTTTCCTGAACTCAACAGACACCTTGGAATGTCCTCTGCACCCACTGCAGGGTGCCCAACTGAAGCTTCAGAAGGAATTTGGAATTCTACCCTCTCTTCTGTAAAATAAAGGTTCCTAACCAAATGGACTTTTTAAAAGCCCAAGTGCCCTTCCCTTTGGCACACAGTGAGGGGCTCCACACCAGCCCCATGCAGAGGAACACTCAGGCAGATTTCAAGGAGACTGTTGACCTGTCACCGTTTATTATTTCAGCACTGTAACTGAGGAGCCTGAATTGCTGGCTTCTTCCCTTTGTATTTGTGTAAGGAGCACTGTACTCCTATAAAAGGTTTTAAAATACAAAATGTACAAGAAAACACAATCTCAAGTGCTGTAAACATAACTAAGAACCAGTTCCTTAATTGAACATCATCCATTTTATAAAATACAAGGTTTCAACTTGAACCCACCTGAGCCATACAGATGACCATCTGTTCTGGGTATCAACAACAGGGCTTTACAGCCGGACTCAGCAAAGCTCTGTTGATAGGGGCTAGCCCTGGGCAGGTATGGGATGCACCCTGGGCAGCAGCACCACACTCGAACTCGAAGACATCTGTTCCTTTAAATGCTGTTTTCAGCCAAGTTTCTTAGTGCATCTCCAGTAAGCAGAAGGCTGCTCATCCCATTCCTCAACCCACGGTCTAGCAGGGCTGGAGCGGGCAGGGGCGGGTGCTAGCACGTGCCAGTTGCTCAGTGCTGTAACTAGAGTTCAATTGCATAGTCCAGTGGATGTGTGCTGTAACACCACTATGTTGCACAAAAAGTAAGGTCTCTGTCTACAAAGCCAAAAATACTGTCTCTTACACCAAAGCTTTTACAAAGCTGATACAAAACTGCTTATGTAGTATACAAAGCTCTATTTTAAAATTTAACTTTTATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAAAAGGCATCAAATTTTGGTGCATAGCAACTCTGGATCATAGAGGCTTTTATTCTTGAGGGCAACAGAGCAACCCCCAAAGGGTCTTGCAAGGGAAGCTCTTGTAAGGACCCCATGTGAGGTGGCTACCCCAGGGGTGTGAAGGCGGAGGAAAGTCTGGCCATCTCAAGAGGGTCAGCCCCCTAAAACCCTCCAGAGGAAGCTCTGGGCTTCCAACCACAGGCCCCAAAGCAAATCTATCTACACTCCGTGACACAAAACTCACTTTCAAAGAAAATGTGAAAACACTGGGCTCCAAGAAGGACTAGAGTGATTTGCTGAAAGATAGACATTTTTTCTAACTAATTTTAGGGAGAAATTGAAAACATTGTGGCTTAAAGGAAAAAAAAAAGACCATACCTCATTGTAGGTCAACAGTTCCTATCTGGCTGACTAGAGATGGTGGACATTGAGCTGGCTCCCTCCACCCAGGCCTCACTTGGCCTCAGTAGAGAGTCCTGGCATCTGGGACCTACAATCCCCTGGGGTAACAGCAATGGAGCCTGTGACCAGCCCATCACACTGTCTCTCCTATGTAGGCACTCAGAAAATTTGCTTCCTGAATAGAAGTACAACATTTCATTTGAAAACATACTGCAAGCTTTAGGGGCCTTGAAATAGGCCCAAGCCTTGGAACAGGAAACTAATCCCACTAAGGGGATAGGTAAGGGCAGGGTTTGAAGAGAACCCAAGTTGGGCACCTCCTTTGGTAGACAGCAGGCTGGAGTTTCTTGCTGGCCCCTCTTTGGGCACCAGCCTTACCAGCAGCAGCACCAGGGCATCTTTGGTGTGGAGGGTCAGGTTTACAATGGTATCTCATTTTTGGATTTGCCTCAAAGCCTTCTAGGGAAAGGTTGTTTTTTATGCCATGTGGATGGGGCAGGATAGGCCAGGATCATTTCAGGCTGTAAACAATGAGGGAAAAGCCTCCCATGCCAGTGCAGATCTTAAGAGCTTCCCATCTGGAATCCTGCAGGTCCTCTGCCCCGGTCCCGAAGCATAGCTCATTTGTGCTTGGCTTCTGACACAGCCTGGCCTCTATAGAGATGAGCTAGAAGCAGCAAAGTTGCCTAAACAAACCAACAAGAGACTGGCAGCCAAATGCTGATGCTTCCACTTGGAAAAGGTCTGGGACCAGAGGACATAAAAAGGAAAAATACCCCACAGCCTACCTGTTAGTAGGATGGCAGGAATTAAAGATATCAAGCTAAAAAAAACCCCATCTTTCAAAGCTCCCTTACATGTAGTTAATTTACCCAAGGCCCTGAGGGGAAAAAAGCAATTTCAACATGGAGACGGTATGGAGAGACAGCAGGAAGATTACCTAAAAAGTTACAAAAATGCTATGCTCTGGAATGTCATTTTGTATTCCAACACTTCAGTGATT EMBV3_40965 GTACTTGGGTGTAGGACTCTAGTGTTCTTGGGTGTATTGCATGGGCTGCATTATCTACAG Gene GeneID:404110|ZFAND5:NM_001101045:1_cdna UTR3_Alt 2 NULL GeneID:404110 8 GENE ZFAND5 ZNF216 zinc finger, AN1-type domain 5 EMBV3_42627 ATTGGCGACCTTACCATTGACAAAGGCACAGACGTTGTGGTCAACCTGTGGGCACTGCAT Gene GeneID:281739|CYP17A1:NM_174304:33_cdna Constitutive 0 NULL GeneID:281739 26 GENE CYP17A1 CYP17 MGC134213 P450c17 cytochrome P450, subfamily XVII EMBV3_29777 ACTGAAGTGTGGAATGCCCCCCAGGAGGTGCCCTATGCCTACAGGGGAATTATCCTAAAA Gene GeneID:513513|CHI3L2:XR_083631:385_cdna Constitutive 0 NULL GeneID:513513 3 PSEUDO CHI3L2 NULL similar to chitinase 3-like 2 EMBV3_20623 AGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGAT Gene GeneID:100336470|LOC100336470:XM_002698278:979_cdna Constitutive 0 NULL GeneID:100336470 25 GENE LOC100336470 NULL hypothetical protein LOC100336470 EMBV3_11238 GTGAAACGTCTCTACACCCTGGATGGGAAGCAGGTGATGTGCCTTCAGGACTTTTTTGGT Gene GeneID:613449|DCLK1:NM_001109962:190_cdna UTR3_Alt 2 NULL GeneID:613449 12 GENE DCLK1 MGC152477 doublecortin-like kinase 1 EMBV3_41716 GAAAAATCATAAACATTCAGTTAATAACCCTCCCACTTCAGATGGTGCTGCCGCAGCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26237 TGCAGTTCTCTCCTCCCACCACTCTGGCCTTGTCTCAGGCTGCACCAAAGATTCCATCAT Gene GeneID:513723|RALGDS:NM_001101978:88_cdna Constitutive 0 NULL GeneID:513723 11 GENE RALGDS MGC152121 ral guanine nucleotide dissociation stimulator EMBV3_38704 ACTCTGAGTGTTTCAGTGACTGCTGTCTCATCAACTTGGACTCTGGTGGCGCCTTCTGTG Gene GeneID:100297290|LOC100297290:XM_002697213:114_cdna Constitutive 0 NULL GeneID:100297290 23 GENE LOC100297290 NULL hypothetical protein LOC100297290 EMBV3_08847 AAATTAGAACGGCTACACGCTGTGGCAAACACAAGGAGGTTTTCATCTGCTACGGCCCCC Gene GeneID:540440|SETD4:XM_002685150:116_cdna Constitutive 1 NULL GeneID:540440 1 GENE SETD4 NULL SET domain containing 4 EMBV3_35774 ATTAACTGAGGGCGCCGCGGACGCCACTGGACTGCTGACAAGAGTTATGTTACCTATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17767 ATCTTTGGCCTGGAGTTTCTCATAGTGTCCCAGTGGCCTGCACATCAACAGCATCACCCA Variant GeneID:613815|TMEM37:NM_001034744:26_cdna 403^596 1 EMBV3_38051 GeneID:613815 2 GENE TMEM37 MGC126930 transmembrane protein 37 EMBV3_35225 CTTAAATACAACAGACCCTAGCAGTACATTTTTTGCACAGTAATAAGTTGACTCACACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06393 TGAGGATGAGAAACGGCGGACCCTGGGCCATAGCAAACTGGACCTCATCACTAAGTACAA Gene GeneID:515230|LOC515230:XR_083835:1_cdna Constitutive 0 NULL GeneID:515230 13 PSEUDO LOC515230 NULL similar to Protein FAM83C EMBV3_39619 TCAGTAACTTGATCGCTTCAGAAATCGTCCGCAACGAGGACATCAACGCGAGGGTGAGCA Gene GeneID:520039|RASGRF1:XM_002696609:108_cdna Constitutive 0 NULL GeneID:520039 21 GENE RASGRF1 NULL Ras protein-specific guanine nucleotide-releasing factor 1 EMBV3_38381 GACTGGTGAATAACATACACAGGCTCATCCGCACCAGGCCATTTGATTCCAAGCACTACG Gene GeneID:337903|PAG9:NM_176620:22_cdna Constitutive 0 NULL GeneID:337903 29 GENE PAG9 NULL pregnancy-associated glycoprotein 9 EMBV3_34484 GGGGTGAAGTCTCTTCCAGTCCACAAGGAACTGAAGTAGGGGATAGGAGAATACCCAAAT Gene BVT0102_344034 + 0 NULL GK000007.2:90176054-90515924 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29860 GTGTTGCTAGTGGCTTGGCCGCTCTTTGTTAAAGCATATTGGGTTGGAAAGGTGTTTGCC Gene GeneID:100337082|LOC100337082:XM_002690056:39_cdna UTR3_Alt 2 NULL GeneID:100337082 9 GENE LOC100337082 NULL synaptosomal-associated protein, 91kDa homolog-like EMBV3_10041 TTCGGAGGTTTGCGTTTCATCTCCACGAGCTTTGAATGTCAGTTGCAGTTGGTCCGGCTG Gene BVT0102_192913 - 1 EMBV3_04342 GK000004.2:117730634-117819450 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185482 TCONS_00185483 1 XLOC_111598 NonCoding TCONS_00185483 XLOC_111598 NonCoding NonCoding - 4:117804325-117810675 - TSS137887 1832 3 TCONS_00185483_3 99 0.060589519650655 2 0.711765632383052 0.000118826758982308 0.000109698807764567 0.000120065328033934 0.000512210224372412 0 1.95246127630173e-06 9.54961109967905e-06 1.29140937150224e-05 6.55141486116441e-05 0 0 1.95168357438501e-06 2.15613882531203e-12 0 6.44550891920533e-05 0 0 0 2.34852932298286e-05 0.000208048975564274 0 0 0 5.49058080233809e-05 8.32021793834793e-05 0.000365348003102085 4.15767415534336e-05 0 0 0 NM_001039350.1 DPP6 Homo sapiens dipeptidyl-peptidase 6 (DPP6), transcript variant 3, 1e-52 212 70.46 0.276200873362445 0 noncoding 1 1 1 1 0.0422172262446902 0.774873340090809 0.00701067920049044 0.918106619122442 GCCAGAGGCCCCGGGCACTCGTGCAGGCCCAGCTGGAAGGGCTCTGGTCCCATCTGGCCACAACCAGCTCAGCGCCAACCGGGCACAGCTGACCCCCCAGTTCCTAGGAAACAGCCGCACAAAGGCTGGGCTACATCAGACTTACTGACTTAAAAACGACAAAGTGAATGAGTCTCTAGCAGATGTGGGTTTGCTGACGCCTTCTAGTGAGCAACGCAGGGGCCTCAACGGAGAGCCAGTTTTACTGCTAGTGCTGGGCAGGGGCTCTGCGTCTTCCCCTTGAAACTTCAGACATGAAACTCAGATTCACGTCCCTGGGTGATCCCTGGACTTGACCGGTCCCGCCCTTACTACCATCAGGGCTATTGCTACTGTGGACGCAGGTTTTAGGAGCTGCACGCAGACCCCTGAGGACACATCAGACCTGGTCAGGGCCCAGCGAGGACCGCGAAGACTTCTTAAACGTCGGCATGCTTTTTGGGGTGAAGGGGGTGGAGGATAAGCAAGAAAAGAGCTCTCGAGTGGTAAAATAATGTTTTATTCCATGGATGAACACACTACCATGCCACACTTCACTCCCTCCTGCCAGATCTCATGGCCAGGGCCGGCCTCCCCTTTCAGACTGAGCTGGCTGTGCAGTCGGTCAGGCCCTGACAAGACAAAAAGCATGGCCAGCTGGCACTCGGAGTGGTCCTGCGGGCGGCACCTTCATCCTTTTCCCAAACGCTGATGTATCACCTGAAACAATCCCATGACGATCTTCCAGCCGGACCAACTGCAACTGACATTCAAAGCTCGTGGAGATGAAACGCAAACCTCCGAACACCAAAGAGTGACGCGGACCTGTCTTCTCTGCAGACGAGGATGTCAGGGACCTCCTGCTCCCCGGCGGGAGGGGGACCCGGAGACATCGGGACTGACGTTCAGGCTGTCAACCAGCTCCAGAGGCGATGACGGTCTTCGGTGCGTTTCCAACCGGCACTCGTAGAGACAGCAGCTTGGCCAGGCTGCGGGCATGCAGGCGAAACATGACGAGGGCTTGGCGGAGGGCGGGGGCAGCGGCGATGGCTGACCGCAGTCCTGTCTCTATATACAACGGAGTGAGATACACACGGACGCTGGCTGTGCCTCTGAGCAGAGGACGCCTCACGAGGCCAGGCTGGAACGTCGCCGAGGCTGCTTGCGTGCAGGGGGTGGGGCGGGGGCGATGCTGGCACGGGCCCCCGCTTCCCTCACCCGAGCACACGTGACGGGCCTGGAGGTGGAGCCAACGCTTGGTCTTTTCATGTTCTTTAACCAAATGTCATCTGAAAAGACGACCTACCCAGGAGGAAAAGGACGGGCTTCAGGACGCGTGGAAACGGACGGCGCGAATCTGAGCCGGACCCTGACGCACTTGGTGGGGGGCGGGTTTTTATTCACGACCCTTTAGTGAACAGTGCTGGATGTCGTTTGCAGTATTTTTGAAATGTCCCCACAAGTCTAGAGACGACCTTGAGGAGAAAGCGTTACTTCTGATCTGGTTTTTTTTAATCCAAACAAGTGCAAAGCCTACATACTGACTGAACGAAACCAAGCAAAACAAAGCAAAGCAAAAAAAAAAAAAAGCACACAGCAAAACAACCCCGTGACCAGAGACAGTGTCAGGTAAAAACCATAGAAAAATACAAACAAATTCCAGAAGGTTAACCATTAGCATCAGCTACAGTGACACTTTGTACAGCCCCTTAAAATGCGGAATCTCCTAATTACAGACAGGAGCAGGCCAATCTAGGGACAGGTACTGTGAAAATAATTGTGCTCTGGTTGGTCCATGGCGCGGTGACCGTCAC TCONS_00182987 TCONS_00182991 r 3' 234 TCONS_00182987 TCONS_00182991 r 3' 1941 EMBV3_23140 AAATGGGTGTAATTTCCCCTAAATTACAGGTATGTGACAACATAGAGAAGTTGCATGCCG Gene GeneID:535264|XPOT:XM_002687547:546_cdna Constitutive 0 NULL GeneID:535264 5 GENE XPOT NULL exportin, tRNA (nuclear export receptor for tRNAs) EMBV3_29349 CCTAAGCTCAGAGGAACTGCAAGGGACCTCTCAAATCTTAACAGGCCTTATCTTCCATCC Gene GeneID:618393|AMTN:XM_002688338:11_cdna Constitutive 0 NULL GeneID:618393 6 GENE AMTN NULL amelotin EMBV3_14161 CCTCCCAGTTCAGGGGGTGGGTGTGTGCCCAGGGTAGAGCAGATTTTTACATTATCAAGT Gene GeneID:767866|NOTCH1:XM_002691620:285_cdna UTR3_Alt 2 NULL GeneID:767866 11 GENE NOTCH1 NULL Notch homolog 1, translocation-associated (Drosophila) EMBV3_43327 CATTCTGCCCCTGCCCACCTCATGGTCCCCCCTTCAAAGATTGTGCAGCTCCTTAAATAA Gene GeneID:538226|SESN1:NM_001101174:59_cdna UTR3_Alt 2 NULL GeneID:538226 9 GENE SESN1 NULL sestrin 1 EMBV3_35971 CACTACCTCAACCTGGTCACTCGGCAACGGTTTGGGAAACGCGACTTTTCAGAAGCTCTT Gene GeneID:615800|PYY:NM_001040587:293_cdna Constitutive 0 NULL GeneID:615800 19 GENE PYY MGC127003 peptide YY EMBV3_33077 CTTGGCAGCACAGAAGTAGAGCAGCCCAAAGGAACAGAAGTTGTAAGAGACGCTGTAAGG Gene GeneID:615926|GULP1:NM_001079509:48_cdna Constitutive 0 NULL GeneID:615926 2 GENE GULP1 NULL GULP, engulfment adaptor PTB domain containing 1 EMBV3_32915 AGTCCGACATCAGGGAGCCTGGTTCCTCCAGCCTTGTTTCTATTTCTCAAGATTGCTTTG Gene BVV0102_019962 + 0 NULL GK000030.2:37607941-37659859 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32888 AAACTGAATGTTACAGGAGTCATTCTGAAGGTGAAAGAGAGAAGGATGGAGGTGTGGAGG Gene BVT0102_252731 + 0 NULL GK000001.2:6739532-7569216 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20340 TTCATCAATGCCTACCTGGTGGATGACAGCTTCAGCCAGGCGCTGGCCATCCGGAGCTAC Variant GeneID:781257|MTCH1:NM_001103305:71_cdna 915^965 1 EMBV3_03090 GeneID:781257 23 GENE MTCH1 MGC179329 mitochondrial carrier homolog 1 (C. elegans) EMBV3_00631 GAAACACATCAGAAGCTCTGCTTAGCTGTAAGTAGTATGATGGGTCTGGAGTATGAAGGG Gene BVV0102_361015 + 0 NULL GK000007.2:85233686-85267806 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25627 CAGGCATAGCTGAAGCCAGGATGGTTGAACTGCTTACCCCATGTTTATATCCCTCTCATG Gene BVT0102_232899 + 0 NULL GK000001.2:66717532-66720532 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42915 TTCCTTCTCTCAGTGTCTGTTTCTGATTTTTATCCTTGCCCCTTCCCCGCCCCATCTCTG Gene BVT0102_037862 + 0 NULL GK000019.2:43505921-43508613 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093960 TCONS_00093962 TCONS_00093964 TCONS_00093961 TCONS_00093963 1 XLOC_057305 Coding TCONS_00093963 XLOC_057305 Coding Coding PSME3 19:43500060-43507739 = TSS70375 3706 1 TCONS_00093963_2 254 0.0385860766324879 11 0.518754884084397 0.00178331379680526 0.00187192960655368 0.00116021264729671 0.000961721633271199 0.00138397922450828 0.000452129979343514 0.000930250938831512 0.000337544211740421 0.00169834957737029 0.00106225679163818 0.000825051222512368 0.000700163565583673 0.000137200487811113 0.000430551925748694 7.66319546610779e-05 0.0135479441833825 0.00745558716563828 0.0152479691376154 0.00134172715962733 0.00117012868037469 0.001264681483359 0.00355171595530172 0.0039735314854103 0.0053504651083127 0.00218289362190276 0.00179500478401869 0.00106034551557032 0.00116223967213865 0.00116952614479329 0.00243532703302302 XM_002696000.3 PSME3 PREDICTED: Bos taurus proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) (PSME3), transcript variant X1, mRNA. 0.0 6662 100.00 0.996492174851592 NM_005789.3 PSME3 Homo sapiens proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) (PSME3), transcript variant 1, mRNA. 0.0 3198 82.45 0.858067997841338 TCONS_00093963_2 sp|P61289|PSME3_HUMAN PSME3_HUMAN Proteasome activator complex subunit 3; 0.0 518 100.00 0.996062992125984 2 coding 1 1 1 1 -0.0363372178309074 0.868473806931448 -0.013621760491211 0.896260040110843 ACTGGAGCGCGACGGCATCGTCGGTCGGGTCCCCGCTCGAGACGGGGCAGCGGCTCAGAAGGTCCCTTCCGTGAAGGCGAGTGCCGGGCAAACAGAGAGGCAAACAATCCCTGAGTCTCTTTGAGGCTCAGATCTCACTAAATCCTCTCCACCATCCTCCCTCTCATTTCACCCGTATGCGGTACAAAAACTGGGAGGTAAGAGCCGAGAGCCAAGCTCCCAAAGCGGAACCTCAGCGCGGCTGCGCAGAGCACGTGCGCATCCTCGCTGGACTCCCGGCGATTGGCTGTGACGCAACTTCCGGTGTGAGCGGCGAAAGCCGGGAGGGCGAGCGAGAGAGGGAGCAGGCAGCAGGGACAGGCAGCAGGCGGGCTGGCTGACCGACGGCACGAAGGGAGGGAGCAAGTGATCAGTGAGTGACCCAGCAAGGGAGGCCACGTCCTGAAAGCAGCCGAGATTCTCCCTTCCTTCTGACCCCCTCCCCGGAGCCCACAGCGCCTCCGGTTTCCAGCGGAGCGGACACGGCCCGGCCCGGCCATGGCCTCGTTGCTGAAGGTGGATCAGGAAGTGAAGCTCAAGGTTGATTCTTTCAGGGAGCGGATCACAAGTGAGGCAGAAGACTTGGTGGCAAATTTTTTCCCAAAGAAGTTGTTAGAACTTGATAGTTTTTTGAAGGAACCAATCCTAAACATCCATGACCTAACTCAGATCCACTCAGACATGAATCTCCCAGTCCCTGACCCCATTCTTCTCACCAACAGCCATGATGGACTGGATGGTCCTACTTACAAGAAGCGAAGATTGGATGAATGTGAAGAGGCCTTCCAGGGAACCAAGGTGTTTGTGATGCCCAATGGGATGCTAAAAAGCAACCAGCAGCTGGTGGACATTATTGAGAAAGTGAAGCCTGAGATCCGGCTGCTGATTGAGAAATGCAACACGGTCAAAATGTGGGTACAACTCCTGATTCCTAGGATAGAAGATGGCAACAACTTTGGGGTGTCCATTCAGGAGGAAACAGTTGCAGAACTAAGAACTGTTGAGAGTGAAGCTGCATCTTATCTGGACCAGATTTCTAGATATTATATTACAAGAGCCAAATTGGTTTCTAAAATAGCTAAATATCCCCATGTGGAAGACTATCGTCGCACCGTGACAGAGATTGACGAGAAAGAATATATCAGCCTTCGGCTCATCATATCAGAGCTAAGGAATCAATATGTCACTCTACATGACATGATCCTGAAAAATATTGAGAAGATCAAAAGGCCCCGGAGCAGCAATGCAGAGACACTGTACTGAGGCCAGGGCCAGGGTCAGGGGACTCTGTGAGTCTGGCTCAAGACCGACATTGCCTTGGTTTGTTACATGACTATCGTGATGGGGAAACTGGCTGGAAATAGTAATCACACCTCTCTCTGTTTTTAGTTAGAGTCTAATGAAACTCTCATGTAGTTCTGTGACGTGTTTACCTCTTTTTTCAGGCCTCAGGAACTCTTCTATTTCCTTCTCTAATACCCCCCGCCCCACCCCGTCCTAATTTCTGGAGAACTCCAGGTTTGTGTGCGCAGGATGCTGGCACAAGAATACTTGTGTTTTCTCTCCCCGGCTCCCTCCTGTGTCTTGGGCTTTGTGTTTTCTTCCTTTTGATGATGAGTTGGTTAGAAGCTGAGGGAACTGGAAGGAAAGTGCTCGGTGTTTTTAGGAACTGGGGCGGGAGGGAGGGGACCGAGTCCTCTCTTCCGGAAGGAAGGTTAGTGTCCCTTGCCACTGTGGGACGTTGGAGCCTCCCCGCCACAGTTGCCCTGGTGATGACTGAGGGTTTCCCGTCTACATACATTGTACCTTGAACATGATCATGACAAGAAACACCTTAGACCTTCTTCTGCCAAGCCCCTAGCTCCTTCAGATGTTTTTATAACTAGGATTTTCACATATACATATGTGTGTGATATATATACACATACATGCAGCACACACATGCCTTGCTGCTGTTACTTGATGCCCTCCCCTCCCCCCTGCCCTGCCCACCAGTAAACCCTGTCTCTCTCACCTTTTCTCTCTCTCTCTCACACACACACACTGTTTAGAAGGTGATAGGTGTCTTAGTCCTCTTCCACCAGGGCCCATTGTCTCCTGATATTGTAGCCTTTTGGGTGCCTGAGGCTGTGAGTTGGAGGAGAGATGAGAAGCAGAGGGAGTGGGGAAGGCCCCTTCCTCTGTGACTTGGGTCCCTTTGGGCGTTTTTGCAAAGGCTTGTCCTCTGACCCCTGGTTGCCTCTTCCCAGGCCAGTTGTAAGTTGGGGTAAGGGTGTCTGCAGCTGTGAGGCCAGATGCTGCTGCTGCTACTAGGCTTTCCCTTTGGGAAAAATGTTTTCTTATTTGTAGTATTGTGCTTCCCGGGAAAGTGTTCACTTGTGTGTATATGTGTGTGCATGCACACACATGCATGTACACGGTGTGTGTATGTGGAAATCTGCCAAGCAAGTCAAAACCATAGAAGAGTTGCCTCTTATCTCTCAAATCTTCCAGAGATACCACTTGTTACAACTTTTGTGTTAACCCTCATCAACCCCTACTTTTTTATTCTGCCACTCCTGGAGAGTCTGTTGGTGGCTCTCTTTCCTTCTCTCAGTGTCTGTTTCTGATTTTTATCCTTGCCCCTTCCCCGCCCCATCTCTGTCTTCCAACCTCCAATCATATTTCCATCTGAGCGCATCATTTTGGTCTCCCGTTATGCTACAGAGGAGGAGTTCGGATGCTGTCTTCCCATGAATAGTACTCAGTAACAAACCAATTGCATTTTAGTTGGGCAGTGCCCCTACTCACCTCCAGACCCCTTCCAGCTAAAACCCTTCCCCCCTCCCGTCCTGTGTTTCTCAGTTTCCCGTTTTGTCTGTTGGATTGTCCAGTACCCCTCCTCCTCCCTCTACTGCCCTTGGATCGTAATGTAAAATTCTTTTACCATGTCAAGAAATTATTAAAAATACAGGTACTTTGACCTCTTTCTAAAGCTGCAGACGCTGATGCGATGCTCTGGTGGCCTGGGGCATACTCACACTTAGGTGTGTGCACATTGGGACACCCACCTCCATATATACCTCCAGTCACTCTATTGGGTGTCTTTACTCCAATTGAGCTGCCTCTTTTCTCTGAAATAATGAAAAGACTGAGGCTTCTGCCTACCAAGGGGCAAGAGTGGGTCCTTCATTTGTGTGCAGTCTGAAGTGCAAGTTGAAAGAAAGTGAAAGTCAGACATGCCCTGTGAGGCTCCTCTGTCCATGAAATTCTCCAGGCAAGAATACTGGGTGGGTAGCCATTCCCTTCTTCAGGGGATCTTCCTGACCCAGGATCTACCCCAGTCCCCTGCATTGCAGGCAGATTGTGTCCCGTCTGAGCCACCAGATAACTCTTCTCAAACCTAACTTGCCTTCTACACTGACAAGATCCCAGCTCCTTCCTTCCTTCTCCAGTAATACCCTGAACTGTCAGTAGAGGGTGCTGTAGTTCCATGTGTGGGGAATCACCTGGCTCAAGACATACCCCACCCCATCGTTTTCTTTATACAATACTTCTCTCTGAATAATGTCTTAAGTTTCTTGAGGATATGCCAGGGACTCCTGGTTTTGGCTTTCAAATGACTTGGAGGGCTGTCTGGGATCTTAGCTCCCTCTGAAATAAAAGTTTCCTTAACTTCCACCTTGCA EMBV3_40602 TTATTTCTTGGAAGAAAATGACAAGCCATGTCTGGACGCGGCAAAGGCGGCAAAGGTCTG Gene GeneID:781434|LOC781434:XM_002692765:124_cdna Constitutive 0 NULL GeneID:781434 14 GENE LOC781434 NULL similar to HIST2H4B protein EMBV3_39953 CTGAAAGACAACTTAGAGTGTGAACTGGAGGCGTTAGTGGGAAGGATGGAGGCAAAAGCC Gene GeneID:353245|CEP57:NM_181450:5_cdna Constitutive 0 NULL GeneID:353245 15 GENE CEP57 NULL centrosomal protein 57kDa EMBV3_04139 CAAGCGTCACTTTGCTCAGAGAGAAGATGGGGGAGGAGGCAGTAATAAAAGATGGAGGTA Gene GeneID:281040|CAV1:NM_174004:15_cdna UTR3_Alt 1 NULL GeneID:281040 4 GENE CAV1 NULL caveolin 1, caveolae protein, 22kDa EMBV3_37148 GTTCACAATTTGGGGACAAAAAGACAGGCTTCCTTTTCCTATGTTTGATGAAAACTGGCG Gene BVT0102_064174 + 0 NULL GK000008.2:74947551-75041541 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225881 TCONS_00225876 TCONS_00225878 TCONS_00225880 TCONS_00225879 1 XLOC_137866 Coding TCONS_00225876 XLOC_137866 Coding Coding BNIP3L 8:74924106-74949667 = TSS169006 3492 1 TCONS_00225876_2 219 6 0.863615023474178 0.00352913437925413 0.000881275674248898 0.00219412030322157 0.000348074414666801 0.00147616492315554 0.00234401339570536 0.00129080396545557 0.00178897818170737 0.00346332524105511 0.00158066840171326 7.36363865454794e-05 7.52631103643489e-18 8.04749520933753e-05 0.000904940572884002 3.8972940753275e-05 0.00118451024716221 0.00114767356517539 0.00402128052066244 0.000844976104497205 0.0016411397851594 0.000120543368522659 0.000391616997148907 0.000518472856493687 0.00570857195720593 0.00285140516508961 0.00780782239931975 0.00153072046751611 6.21516059906151e-05 1.35212378454891e-05 0.000142157059939165 XM_005210289.1 BNIP3L PREDICTED: Bos taurus BCL2/adenovirus E1B 19kDa interacting protein 3-like (BNIP3L), transcript variant X1, mRNA. 0.0 5849 100.00 0.928407789232532 NM_004331.2 BNIP3L Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3-like (BNIP3L), mRNA. 0.0 3231 80.77 0.989117983963345 TCONS_00225876_2 sp|Q3T013|BNI3L_BOVIN BNI3L_BOVIN BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like; 2e-159 444 100.00 0.995433789954338 1 coding 0 0 0 0 -2.2141686334234 0.0228541839814071 -0.528071782547267 7.7476837201215e-05 GGCGGGTCTTGACGTCAGCGTGGGGGAGGGACTGCGCAGGCGCGGAAAGGGGGGCGGGGGACTCGGCTTGTTGTGTTGCTGCCCGAGAACCGGAGACGGTCCTTGCTGCGGGGCCGCAGCTCTTCCAGCCGCCAGACAATGTCGTCTCACTTAGTAGAACAGCCGCCGCCCCCGCACAACAACAACAATAACTGTGAGGAAGGCGAACAGTCTCTGCCACCGCCTGCCGGCCTCAACAGTTCCTGGGTGGAGCTCCCCATGAACAGCAGCAATGGCAATGATAATGGCAATGGGAAGAATGGGGGGCTAGAGCACGTACCCTCCTCATCCTCCATCCACAATGGAGACATGGAGAAGATTCTTTTGGACGCACAGCATGAATCCGGACAGAGCAGTTCAAGAGGCAGTTCTCATTGCGACAGCCCTTCCCCACAAGAAGATGGGCAGATCATGTTTGATGTGGAAATGCACACCAGCAAGGACCATAGCTCTCAGTCAGAAGAAGAAGTTGCAGAAGGAGAGAAAGAAGTGGATGCTCTGAAGAAAAGCGTAGACTGGGTGTCCGACTGGTCCAGTAGACCTGAAAACATTCCACCCAAGGAGTTCCACTTCAGGCACCCTAAGCGTTCCGTTTCCTTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGGGGGATCTTCTCCGCAGAGTTTCTCAAGGTGTTCATTCCATCTCTCTTCCTCTCCCATGTTTTGGCTTTGGGGCTAGGCATCTACATTGGAAAACGACTGAGCACGCCTTCTGCCAGCACCTACTAAGGGAGGAGAAGAGTCCCTGGGCCAGCGTGTGACTTGTGAAGTGGTGTCTTGTCACAGTAGTTTATTTGAACTTGAGACCATTGTAAGCATGACCCAACCTCCACCCTCTTTTTACGTATCCAAGTTCCAGTAACTCTCAAATCCAGTATTTTATTCCAACTCTGTTGAGGCATTTTACTAATAACCTCATTCCCTTTTTGGCCTGTAAAACACTTTAGAATTTCCTAATAAGAGTTTACTGTCGTTTAGAAATTTGCAAGGGCTTCTTTTCCGCAAACGCCACCAGCAGATTGTAATTTTGTCAAGAATGCCATTGTCTTCTCTCAGTACCACCAGACCTAGACCTGCACCATTCGTGGTATAAATCTTACTCTTACAAGATAACCCACCTGTCTCTTCTAATGGGACCAGGTTGCAAATGATATGAAAGCTTTGTTGTTTTGTTTTTCAAGACAAAGGCAAGCTTCCCTAAGCTTGAATTTATAGTTATGAAAAAAGAAAAGAAAAACAAATAAAACAGACAAAATATGACACAAGGAAAAAAATATCCTGGGCAATAAAAAGTTATTTTAAACCAGCTTTGGAGCCACTCTTTGTCTAAGCCTCTTAATGGCGCCTTTGTAATTTGTCGGAGGCAGGCTACGTAAATGATAGGTATAAAGTACAAGAACTAGAATACATTAGGAGATTTTAATACCAGTAGGTTATAATGCTGTCTTTTCAATAGTGTAGATAAGGGATGTCTCAGGCCTAGAAATCTATGAAATTGCTTTGGGGGTTTGTGTGTGTGTGTGTGTGTGTGTTATTTTTATGTTTATTAGCTGCATGTGAATTTTTCACGACTTTGAATTTTCTTTCCTTTTTTATTTTTTCCTAAGAGGCTTTGGAATGAGTTCCAATTTGTGGTATAAATACAGGCTTCTTGTTTTAGGAAGCATCACTTACACTCTGAAGCCTTTCAGCTCTGAAGACAGTTGTCTCAGAGTTATTTCAAGCTCTTGGGAAACTTGGAAAACCAGACCTGGGTTGTGGGAACAGTTGACAGAGTTTTGAAGAGAAGCCATCGGTTTTCTTCTGCTCACTCCCTTTCTCATGTTTGCCATACAACCTGCCTGAGACGATTCCTGTGATTCCACAGGCGCTGGCCACTTCCTCCTCCCGTAGCCATCTTTCTAGTTCCACTCCGCAAGTCCCAGAACATTCAACAACTTCCTCTCATGATACACTTTTGTGTTCGTTTCTCGAATGTGAAGCTTTAGGACCAAATTGTTAGAAAGCATCAGTTACCATTTATCTCAAGGAGGTTGATTGGCTCTCTGAACACACAGCATGACTCTGAAGGGATGCTGTTATATGTGTCATATATAAATAATTACTGTTTATGGTATAGACATTGAATATTTAGAGAACCATAGGGAAAACCAGGTCAACTTGAATAAAAGCACTCTGAACCACCAGGTTTGCTAGTTTGCAGAAACTATCTGTCTTCTCTCTCACATCAAGTTTTGTAAAGTTGATGTGTTATAGTGGAAAATAACGTATAGCTTAAACAAAAAAAATTAGTTTCTGACCTCTTTATTCAAGAATACATCTGGATATCTTTAAGGAAGATGGTATATCCAGGTAGTCTTCTGAATTCTTTGACTTTTTCTTTCTAGTTTTTGTTGTCTCAACAATTTTGGCCATCTTTTTACTATGCCTTGTTTCTGTGTCTTATTCACAAATCTAATAACACCTGATTTGCCTTCTATAACCTATTTATTTCAAGTCTTCATTTTTCTTTGGGAAGAAAGTACATCTGCTGGCTCATTGGACTTCGAAAAGCCTTGAATAAAATTGGAAAGGCCGGTAAACTTAAGTGAACTAAAGAGCTAAACTGTTCTGATAACACAGTTTGTATTACATTGAGTATCATGGGAGGGAAAGGTAAAATTAGAGAAAAGCAAGTTTATACAGACAACACAGGACTCTGTTTTGAAATTCAGTAGTAATCCTATCAGGAGTGTGATTGAGTACATTTGTGGGGTTTTTTTGTTTGTTTGTTTTCCAACATTGAAAATAAATGTAGTTCTGCCCCTTTTCTTCAAATAGCTGTGAAATTTTGGACTATTACTTAGAACATGAATACATGATCACAGTAGAACTTAATCATAAGATGAAATCATGCAGTATTTATCAATAACCTTAACGTGTGGGATAAATGTTTATGCTCCTCACCAGATTTGTTTTGACTGGAGCCAGATTGTGTGATTGGAAAGGAGAATTGGACAATGAACAGTTGACATGTTTTAAGATCAACGTTTAAAAAGCTTTATGCCTGTTCACAATTTGGGGACAAAAAGGCAGGCTTCCTTTTCCTACGTTTGATGAAAACTGGCGTAAGATATTTGTAAATATAATCAAGAGCAAAACTGCACAAACTTGCACATTGACAAGTGCAGCAAGTTATTCTGATTGCAGTAAAAACATTGACTATTCTAAACAATGAAAACTGAAGATTTAGCCAGTCAGATGAATCTTCAAGTGAACCAGTTGTTGAAATTATCGGACTTAACTGAGCCAAAGTGATTATGCATTCCTCATCTATTTAGTTAGCACTTTGTATCATGATATACAGTTTACAATCCATGTATAACTTGTAGCAACAAACATTTTGTGCTATTAAAGCTATCACAAAACCCTTTCTGTCAGTAT EMBV3_08422 CCTGAGTCATTGTACGGCCAAGAGCATTTCCTTCCCACAGAGCATTTTCCAGATCAGCAC Gene BVV0102_310990 + 0 NULL GK000026.2:8580389-8632194 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151338 TCONS_00151340 TCONS_00151342 TCONS_00151339 1 XLOC_092093 NonCoding TCONS_00151338 XLOC_092093 NonCoding NonCoding - 26:8589495-8604648 - TSS113157 4610 4 TCONS_00151338_6 83 0.69826464208243 3 0.69594772967265 9.41224156077187e-05 0.000148031428969879 0.000166846406055377 0.000109573603220904 0.000100357254844205 6.84943682748321e-237 3.95321954844625e-05 5.6463962901727e-06 2.41562049592793e-05 0 3.95279787068093e-19 0 3.7849451228169e-38 0 8.42608490976955e-06 0 0 0 0.000286958898019728 4.42875579729363e-05 0.000390093870153444 0 0 0 0.000135167650899838 1.23489453042058e-27 4.48272920842369e-09 0 0 0 XM_005200861.1 GYG2 PREDICTED: Bos taurus glycogenin 2 (GYG2), transcript variant X1, 4e-134 484 90.28 0.0774403470715835 0 noncoding 0 0 0 0 -0.506526743832453 0.0439074083635433 -0.0566477555112026 0.418970779801334 GCTTCTAGAAGCTGGAGAAGATAAGCAAACACATTTCCCTTTGGTTTCCGGAAGAAATACAGTCTTGCCAACACCTTGATTTTAGCTGGTGAGATCCATCTTGAACATCTGATTATACTGGGTCCCGTGTTCAAGGGCAGCACTGCAAGAGTCAGACAAGTTATATACTGTGCACAGTAGACAATCAGTATTAATGAACTAAAGAGGAATAGAGTGGACACCCTCCGATACTTCCGAGACGAATATGTGGACTCGAGTAAAAGATGAGAACAGGCGCTAGAGCCACCAATGATGTTTTGTTTCTTACTGGAATATCTCTGGAGTTCTGCAACACTGTTAACTTCTAAACATGCTCTTCAGCTGTGTCTGCTTTTCCCCTGCAAGAAATAAGCTACCAAAGAGGCCCTCTGCTGCTCTCAGTCAGCCAGCAACTGCCACACCTGTTTCGCATTACTGAGTGTGGCGCACTAGAACAACTTGGTAACTAACTCGAGAGACTAATTCTCTTGTCTTTGTAGGAACTGTTCCCCAATATCGTTCAAATACCTGAGTCATTGTACGGCCAAGAGCATTTCCTTCCCACAGAGCATTTTCCAGATCAGCACTGGTGAAATCTTCAGCAGCTGGACTGGACTCTGTGCCAGGGACTGTCTGTGCCCTGCAGTTCTCGAAGGGTCATCCCTGACATTCGGTTAGTGAGCGCCCTGCAGTCTCTTCAGAATGGAGTCATCCCTGACATTCGGTTAGTGAGCGCCCTGCAGTCTCTTCAGAATGGAGTCATCCCTGACATTCGGTTAGTGAGCGCCCTGCAGTCTCTTCAGAATGGAGTCATCCCTGACATTCGGTTAGTGAGCGCCCTGCAGTCTCTTCAGAATGGAGTCATCCCTGACATTCGGTTAGTGAGTGCCCTGCAGTCTCTTCAGAATGGAGTCATCCCTGACATTCGATAAAGCTGGTAGGAACAGTCATGTATAAGCTAATACTTTGGCCACAACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAAAGGGAGAATGGGGCCACAGAGGATGAGAAGATTACAGAGCATCACTGACTGACTTGACATGAATTTGAGCAAACTGAGAGATTGTGGAAGACAGAGGAGCCTGGTGTACTGCAGTCCATGGGGTCACAAAGACTCAGGCATGACTTAGTGACTGAACAATGAAATTCTTAGATTTTTCTTGGGCTGGATCATATAGTGCATGTACATTTGACTTTCTAAGGTGGAGTTTTCCAGAGTGATTGAATCATTTTACCTTCCAAATGTAGTGTGTAAGAGTTCTGGTTCTTCTACATTCTTGCCGATGATTGATTGGTAGGTCTATCTCTTTAAGTTTTGGTTACTCTAATAAATGTATAGGGACATTTCCTATGGTGTTAATTTGCATTTCCCTTAGGACTAATAATGTTGAACATATTTTTGTGTATTTATTTGCCACTTCACTAAAGTGTCCAGCCACATCTTTTGCCCATTTTTTTATTAGGCTGTTTGTTTTCTTAGTGTTAAGTTTTGAGTGTTCTTTACATAGACTGTGGTGTTGAAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAATCAGTCTATCCTAAAGGAAATCAGTCCTGAATATTCACTGGAAGGACTGAAGCTGAAGCTGAAATGCTAATATTTTGGTCACCTGATGCAAAAAACTAACTCATTTGAAAAGTCCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGCTGAATGACACACTGATTCAATGGACATGAGTTTGAGTAAACTCCAGGAGTTGGTGGTGGACAGGGAGGCCTGGTGTGCTGCAGTCCATGGGTTCACAAAGAGTCAGACACGACTGAGCAACTGAACTTACAGCCTGGATACATGTCCTTTAGAAGATATATGCTTTGCAAAGATTTTCTCATTATCTGTGTCTTATTTCTGTCTCTATTGAATGCCAGAAGTTCTAAATTTTGATGAAGGTCAATTTATCAGTTTGTCTTTGTATGGACTATGCTTTTGATATATCTAAATAATCTTTGAGGGTCACAAATTTTTCTTTTATTTTTTTATTCTATAAGTTTTATTTTAGGTTTTAAATTTTATTCTATCATTCAATTTGAGTTATTAGTTATGTACAGTGTGAGGTAGGGATCAAAATTTGCTGTTTTACATATAAACGTCCAATTGTTCCATCACAGGGTGTTGAAAAGAGTAGACTTTTTTCACTGACTTGACTTTGAACTTCTGTCAAAAATCAGTTGTGTGTGTGTGTATATATTTGAACTGTTTCACTCCATTGATCTATTTCACTATTCTGATGCCAGTACCACAAGATCTGGGTTACTTTAGCTTTATAATAAGTCTACAAGTCAGGTAGTGTAAGACCTCAAGCTTCATTGTTTTCAACGATGTGCTAGCATATTATATTTGCATTCTATATAAATTTTGGAATCACCTTGTCAATATCTAAAGTATCTTCTGGGATTGAGATTTTGATTGGGACTATATTGAAACTATAGCTCAGTTTGGGGAGAACTGACATTTTTAGCAACATTGAGTCTTCTGACTCATGAACATGGTGTATCTATCCACTCATTTAGACTTCCTTTAACTTTTTTTTACTTTGTTTAATCTCAGAAGTGTTCTGTAGTTTTCACTGTATAGGCCTCACATCTTTTGTCAAATTTAAATCTTTGTATTTCACATTTTTTGATGATGTTGCAAATTGTATTTCTTTTTAAATTTCAACTTTGGATTCTTTGTTGCTAGTACATAGAAATATAATTGATTTTTGTACTGATCTTTTATCCTGCAACCTTGCTAACTAAATTATTAGTTCTAGTAGCTTTTTTCAGAGTCCTTCAGGTTTTCAGTATAGACTATCATGTTGTCTCTGAATAAAGACAGTGTTACCTCTTCCTTTTCAATCTAGATTTTAAAAATTTCCTTTTCTTATTGCGCTGGCAAGAACCTCCACCACACTGCTGAATAGAAGTGGTAGAACTGGCCATCAATGTTTCTGCTGTTACAGCCTTTTTCCTTTGAGAAGTCCCTGCTGAGGTTGGGGGCATGGGTGTCTATTCAAGCCTGCCTGAACTTGCTTTGCAGCCATTCTTCTCTAAGATCTTATTACCATCTGGTGGGTGCTGCTTGGATGCAGAAGCCAAATTCCCTATATTCTTGGCTTTTCAGATCTCACTGTTCTCTCTCTCCCCATCCCCATCCTCTCTCTTCTCTATGATAGTCTGTCTGTACTGTGAATCACTGTCTCCTACTCTTTCACTTCCTGTAAATTCTGGAAAAACACAGTCATATCCTTGAATGGAATCTCCAATGTTTGGCCAGATACCTTTACTGAAGCAATGTAGACAAATGGACCTGCTGAGAAAGGCGGACAATACAGTGAGAGCAGAAGTGAGTTAATGTCATCCCTTCTTTTCCTTTTTTTCCCCTCTTTCCCTTTCTCCCTTTCCTCCATCTTTCACTCTCTCCCTCCATCCATCCCTCCCTTCCTTTCTTCTTTCTATTCAACCAGCAATTCTGAGCACCTCCTGTCAGGTACAGCCAACCTCCTTAGCTTTAATCCTCTGCAGTAGTGGGCAAATGCTCCTGCATATGGACAACAGCAGAGTGATTCACAAATCCAAAAACGGAGTTGGGTTCTCTGATTTTTCTAACAGCTTCAGTGACTCTCAGATAATAAGCACAATTTACATTCATTCTAACTTGATAACTTTTCACTGTTTTATTATTATCTATTTCTTCCCAACGAATTATCCTGGAGCTTAGCAACTCAGAAAAGACTTATTATCTCCTATAAGGGATCCAGGGATCCAGTTGCAGTTTAGCTGGGTCCTCTGCTTCAGAATCTCTCATGATCTGCCATTAACCGTGTTAGCCTGGGCTACGGTTCTGTCAAGGCTCTGCTGGGGAAGAATCTGCTTCTGAGTCCAGTCATGTGGTTCTTTGCCTGATTCAGGTCCTCACAGGCTGTCCCTTGCCATATGGCCCTTTCTATAGCACAGATCACAACATGGCAGTTGGCATCACCAGAATGAGCAAACGAGATAAACTAGCAAGATGCCAGTGAGTGGAAATTGTAATCTTTTATAACCTTATCTCAAAAGTGCTATTCTATATTCTCTTCATTAGAAGTGAGCCACTTGGTCCAACTTGTGCTCAAGGAGAAGAGATTATCTAATGGTGTAAATACCAGGAGGTGAGACCAGTGGAACCATCCCTACCATAACTATACTTTGAATGGAGGCCAATATCTCAAGAAATTGAGGTCAATTGGCAGTTCCTTTTTGTTTGGTGAAGGGGAAGGAGCCAAGATTTATACGCATCTACCTTGTGTCAAGCCCATTGTTGAATGATCTTATGTGCCTTACTTATTTCACTCCCACATCTTTCCTGTGATATATTTGTGGCAGATGTATTGAGGCTTTCCCTCAATATTCATTCTTCCATTCTTTCCTGTTGTTGTTCCCTCGCTAAATCATGTCTAACTCTTTGCAACCCCATGGACTGCAAAATTTCTGATGGTTGCCCAGGTGAAGAC TCONS_00149933 TCONS_00149934 TCONS_00149936 TCONS_00149937 TCONS_00149938 TCONS_00149939 TCONS_00149940 r 3' 8375 TCONS_00149933 TCONS_00149934 TCONS_00149936 TCONS_00149937 TCONS_00149938 TCONS_00149939 TCONS_00149940 r 3' 12038 EMBV3_07020 GGGAAGAGAAGGGTGACTTCGAGAAGAAAGGGGGCATCAGCTTTGGGAGAACCAAGGGGA Variant GeneID:781555|ASTN2:XM_002689954:11_cdna 572^724 1 EMBV3_28272 GeneID:781555 8 GENE ASTN2 NULL astrotactin 2 EMBV3_15197 GAGCTCTACACTGGCCTTGTCATCTTTGGGTGGTCTGGTGGGTTCATTCTCTTCCTAACC Gene GeneID:784260|LOC784260:XM_002690673:256_cdna Constitutive 0 NULL GeneID:784260 10 GENE LOC784260 NULL similar to olfactory receptor MOR106-11 EMBV3_03692 GGAGAAGCTGATCCTGAAGATGGAACAAATCAAGGAGAACCGTGAGGCGAATCTAGCTGC Gene GeneID:534991|STMN2:NM_001034622:40_cdna UTR3_Alt 2 NULL GeneID:534991 14 GENE STMN2 MGC128538 stathmin-like 2 EMBV3_38728 TATGAAAGAGCATCACACAGGAACAGCCCAGGGCAAGGAAACAGAGAACATCATACCCGC Gene BVT0102_167936 + 0 NULL GK000008.2:74374460-74882555 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24821 GTGTGGGGTCTTAGTTTCCTGACCAGGGATCAAACCTGTGTCCTTTGCATTGGAAGGCAT Gene BVV0102_130906 + 1 EMBV3_24251 GK000029.2:43794487-43825076 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04133 CCACTCTTACTAACACCTGAGCCATGCTACCCGTGTGCGGGTTACACAGGATGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_18576 TGCGGGACTTAGTGGAGATAGCAACGGCTGAAGCCCCACCCAGTGCTGAGTAATCGGTTT Gene BVV0102_341351 + 0 NULL GK000011.2:105894000-105896915 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026484 1 XLOC_015027 Coding TCONS_00026484 XLOC_015027 Coding Coding TMEM203 11:105892464-105895883 o TSS18977 3419 3 TCONS_00026484_3 136 0.0810178414741152 1 0 0.000378015467112859 0.000114620829377082 0.000320243662104914 0.000104439385887409 0.00021082963163683 3.54277590304489e-06 0.000136454250567507 0.000118072450827942 0.00024923393418039 4.14019330111787e-06 1.1525004881501e-06 2.3394796616731e-05 2.51742206875322e-06 1.19686119518568e-11 4.04992131805912e-05 6.63869844649761e-05 3.99713516408668e-11 7.38361283482647e-05 0.000425766905028344 0.000703256139742998 0.000289455351601405 1.47849554035549e-05 2.13527543009651e-11 4.19039135146982e-05 0.000259653619653636 9.27302042854297e-05 9.67227999541385e-05 9.68978917719481e-06 2.43800094408397e-06 0.000183826738127853 XM_003584965.2 TMEM203 PREDICTED: Bos taurus transmembrane protein 203 (TMEM203), mRNA. 0.0 2736 100.00 0.443404504241006 NM_053045.1 TMEM203 Homo sapiens transmembrane protein 203 (TMEM203), mRNA. 0.0 1159 77.21 0.439894706054402 TCONS_00026484_3 sp|Q8R235|TM203_MOUSE TM203_MOUSE Transmembrane protein 203; 3e-90 262 99.26 0.992647058823529 1 noncoding 0 0 0 0 0.0319570238509217 0.795400769092068 0.00507502044641411 0.928007046397181 GGCGGGGCATGGCGTCCGAGCGTGGCGGGCGTCGGCGGGTGGCCTGTGAGGGGTCCCGGGTCGGGGCCAGGGGGTCGGCCGCGAGACGGGGCCGAGGGCCGGGGCAGGCGGGGCCGCTTGCTGCCTCTCGTTGGCCGCGGCGGCGGCAGGCGCCAGCGAGGCTAGGAGGGCGCGGCCGCGTAGCTCGGCAGCTGGGACGCTCGGCCGGGCCCTGGCCCGCGCCCAACCGGCGCGATGCTCTTCTCGCTCCGGGAGCTGGTGCAGTGGCTGGGCTTCGCCACCTTCGAGATCTTCGTGCACCTGCTGGCCCTACTGGTGTTCTCCGTGCTGCTGGCCCTGCGTGTGGACGGCCTGGCTCCTGGCCTCTCCTGGTGGAACGTCTTCGTGCCCTTCTTCGCTGCTGACGGGCTCAGCACCTACTTCACCACCATCGTCTCTGTGCGACTCTTCCAGGATGGAGAAAAGCGGCTGGCCGTGCTCCGCCTTTTCTGGGTCCTCACAGTTCTCAGTCTCAAGTTCGTCTTCGAGATGTTGTTGTGCCAGAAGCTGGTGGAGCAAACGCGAGAGCTCTGGTTCGGCCTGATCACGTCTCCGGTCTTCATTCTCCTGCAGCTACTCATGATCCGTGCCTGCCGGGTCAACTAGCCTCGCAGAAGATAGGCTGGAGTGCCGAGACCCACGCCGAGTCCCCATGTGTACCGCACCAGAGGAGAAATCTGAGTCTGAGAGCTAGCTTGTGCCCTGATGCGTGCCTGGTTTTCGATCAGTCATGTCTGAAATTGTTCCCTCAGCTGGGCTAAAAAGAGAAGCCTTGATTCTTAAAGTGTATTCTCTCTTATTTCATGCTTTGAATAGCTAATTTTGAACTGAGATCCTGAGAAGGATCCTGAGAAAGCCAGACAATCCTGAACTCCTGACAGAACTGCATATAAGTAAAATATCCTCATGGGCTCTTTTGAGTATTTTCATGGATCCTGGCAAAGTACGCCGTGTGCAAAGGCTACAAAGCTGGACTCGGGTTTGCCCTGGCCAGCAGTGCTGACCTGAGTGCTTGCTGTCCCCATCTCCCCGGACAAGACTTTCTTAGATGCTTGAGCTCTAAAAAGTGTAAACCAGCTTGTGTCTTCTTCCCAGTGGCACTGCGGAGGATGGCTTTTTCTTCATTCCAGCCCAGGCAGACAGGAGGATGTTAGATGAGCGTGACCCGGACTCTATCTGGAGAACTGTCGCCTGAGAAAAGAACTTGCTTTCAAGGCACTGCTTGGCTTCCTATCCCAGCTTTTCCACCACCTTGTGGCCGGCAGTGTTAGCGCACTTGAGACATTTAGGCCACTCTAAGGGACCAGAGAGAGGAACAGGTGTTGTGATGTGAATAGGCATTGAGACCTACACATGGGAAGTTTGCAGTTGTCTCAGCCCACGCTTGTCACTCTGAGGGCTTTGGTTTGATGCCGGTTAGGTGCCACATGAGCACATTTGCTGAGATGAAAATAAAATAAGGGAATGCCTTGCTGAGACATACAGTGGTCGCCTGGCCTTTTGAGGGTTGATGCTGAGACGCCCCTGCTGTGCGGTGCACGTGGTGCAGAGCTGAGGCTGTAAGAGAGGCTTGGAAGTTGGCTCGAGCCTTCTGCTTGGATGGCAGGGTAGTTCCCTTGGAGCATCCCTGCTCCCCTGCCTGGGGAGCCAGTGAAGACACCCCAGGGGTGGGCCCACGTTGAGGACTAACAGGCGGCTCGTGTGCCATCAGAGTCCTTGTAGGCCTCGCTGATCTGCAGAGCAGGAGTCAGCAGGCTATGACCTGGGGCCTGTGTTTGTACTGCCCTTCAGCTAGAAATAACTTCCATTTTCAAAGGGTTGTGCAGACACCATGGCAGACAGTGAGTGTGGCCTGCAGTGCGGGGCTTGTGATCTGGCACGGTTGGCCTTTGGGTCAGATCACTTTTGGTTGTGTGCGTGTGCAGGGAGAGGCTGTCCTGGGCATCATAGGGTGTTCAGTGGCACCCCTGACCCCCACTTACCAGATGCCAGGAGCACCCCTCACTTGTGACAGCCCAGTGTCTCCAGACATCGCCAGATCTCCTGGGGGACAAAGCTGTTCCTAGTAAGAACCACTGGACTAAATTACTCCCTGTCTCGCCCTTTACAGAACATTTTTTCCTGGACTCTTGTTCTAGTGAAACAGCTTCAGGACCCTTGTCCTAGGATGGATGCTGCACGGCCTGAGCCACTGAGATGCTTGAGTCGGAGGCTGGTCTAGTTTGTGCCACAGCTACAGAAGCATCTCCTACCCAGCATCGGCATAACCTGTGTCAAAACCAGATACAAACTGACCCTTGGGGTTAGGTTTCCTTTTAATGTTATTTTTAGTTTGTATGTTTTGTCACTGCCCTGTTGAATTCTGGTAGTTCAGGATTAGGTAATCCTGTCAGCATACAAGGGATGAGCACAAGAATGTTCACCTTCCTTCTGGGAAGGTGATTTGAAGAGAGTCCTGAAGGAACACTTGAGCTCTGGAAGGCTGAAATCCAGTTTCTTTTCTCCAGCTGGATAGACTGGGCTGTTACAAGTACTGTTATTGTGGTGATAGCTGCAGACTGCCACGGGACACGAGTGGAGAAGGGCCCCGGGGTTGAAACCTGCCCTGGGTCTTTGGAGAGGCCCAGGTGCTCTTGGAGCCTTGTCTCTGAAAAGTGAGTGTAGTGGGAGGCAGTAGTGTCATTTGTGAACATCTGCTGACTGTAGAGAGGTGATGGAAAGACAGGTGACAGTGGTCCTTGCCCATGCCCCCAATTTGTCCTTCTCTCCTTGGCTCCAGCAGGCCTGAAAGAATGTAGTGAACTCTGTGCAGCCCTCCAGGGGCAGTGAACTTCCTCATGGCAAGTACACGGAGGTGTGCCCTCAGTCAGCTTTGGGACTGGGCGGTTCATCAGGTGAATGGAATGTGCCTGGCTATTATTGCCTTGTCTGCCTTGGAGCGCTGTGGGCCTGCCTGTGTGCGTCATGGGCTTCCACACTCCCGTCCGTGTTTGGTGGGCCCTGGATGACCAAGGGTAGATAGTTTCCACTACTTGTTTGGGCAACAAGAGTGGATTCTAGGGGCCAGCAAAAATCAGAGATTCCTGAGAAACCGATTACTCAGCACTGGGTGGGGCTTCAGCCGTTGCTATCTCCACTAAGTCCCGCAGGAGACCGAGGACCGCAGGTGGGCAGTCTTTGGACCCATAGGCACCTAGGCCAGGAAGAGGGAGGCTGGCGTACAACCGGCGCACCGCTCACGGGAGCGAGACAGCCTTCCAGTCCTGGGTTGGCCCTTCTCCCACCGCGCTTTCCGCGGGATAACAGGCGGACAGACCAACCGCATCCAAGGTCAACCGCGACGCGGGGCCCGGGGGTCCAGCCGGCCTGCGGGGCAGAAC TCONS_00026485 s 5' 0 TCONS_00026485 s 5' 0 EMBV3_43154 TTACTGACCCCCTGGTCTATCCCACCAAGTTCACGGTGTCTGTGTCAGGAGTATGCATCT Gene GeneID:516101|LOC516101:XM_002690246:67_cdna Constitutive 0 NULL GeneID:516101 9 GENE LOC516101 NULL similar to trace amine associated receptor 8 EMBV3_37346 GACTCCATTTCCCCATCCTACTTGTTTAAGTGCAGGAAGAGACTGCTGTATTCTGGGCCC Gene GeneID:100295805|LOC100295805:XM_002690214:8_cdna Constitutive 0 NULL GeneID:100295805 9 GENE LOC100295805 NULL similar to histone cluster 1, H2bd EMBV3_34846 CTGGTGCCGCTCAGCACACTTCCATGAACATATCGTGTAGATAGGCTGCACTTATTTTGG Gene GeneID:281952|SLC6A15:NM_181023:26_cdna UTR3_Alt 2 NULL GeneID:281952 5 GENE SLC6A15 NTT73 solute carrier family 6 (neutral amino acid transporter), member 15 EMBV3_15408 TTGAATGCCATCCATCTGCACAGCCCTAGTATGGAGATGGCCTGTGGGCACCTGGTTCAT Gene BVV0102_097438 + 0 NULL GK000018.2:64723171-64742820 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087700 TCONS_00084971 TCONS_00087701 TCONS_00087702 2 XLOC_052573 XLOC_051764 Coding TCONS_00084971 XLOC_051764 NonCoding NonCoding LOC100296121 18:64742071-64759713 x TSS63571 1111 1 TCONS_00084971_2 107 3 0.937191769174083 0.00814176123863659 0.0038435100281469 0.0109100125534303 0.00928063189785827 0.00444167881033676 0.00350298779668744 0.00193180474632819 0.0057397185008368 0.0201054013407964 0.00256623708535217 0.000397730388911553 0.000986185451451953 0.000269505494140331 0.00235353136121525 0.000403856989822783 0.0171675180783621 0.00410100455309831 0.00379140432731352 0.0255845753207581 0.0248624800757388 0.00939789869010003 0.00227806760197865 0.00600803287206556 0.00364105364120287 0.00642686314576691 0.0203231032724166 0.00645419062824427 0.00223486850125804 0.00270850017557417 0.00159241721868296 XR_228574.1 LOC101909336 PREDICTED: Bos taurus zinc finger protein 416-like (LOC101909336), 0.0 1894 98.28 0.99009900990099 NM_003433.3 ZNF132 Homo sapiens zinc finger protein 132 (ZNF132), mRNA. 2e-17 95.1 75.18 0.124212421242124 0 noncoding 0 1 1 1 0.540828145274327 0.061349486392694 -0.0350782640274577 0.495388494297714 TGCAGTGGCTTAAAAAAGTTTTTATTCATTAAAAGAAAAGAGAATTGCTTAGAAGAAAGCAGTTGTCAAGCAGGGTGACTTGAAGATAGAAACATGTCATAAGTATGACATGACTCAATGCCAAAGAAAGTAAACCTCTGTCAGCAGCCATCAGAACCCAGAGTGCATGTGCAAGGTCAAAGCTGCTTAGTTCCTTTCCTAGGCAGTTGATAGGATCTAAGAGCATGACACCACCCAAGTGCTCAGGTTACACGTGCTTTCCTTCAGGGGACAGGAGAGCACAAAGGTCTACCTACCCTGATGACACTGAGGGGACTGACGCCCAAAAGAGGATCTGTCACCTGGTAGAAGAAACTCACAATGACCAGAAGTCTGGCAAGGCTGCTGCACAGGTTAGGAAGTAGACCTGAGCTTTTTAGAAGCTTCCAATGAACCAGGTGCCCACAGGCCATCTCCATACTAGGGCTGTGCAGATGGATGGCATTCAACTTCCAGGTGATGATTCCCTTACGGAGCCTGTTCAGTAAGATGTATTCACTAAGAACACAGCTCATTTGCTGTCTCTTCCCCTAGTTTGAAGGCCTTTCTCAACTATGAACTTTGTGGTGACAGAAGAGGTTAGATCTTCAGTGGAAACTTTCCTACACGCTCTGTATTCTTGGCTCTACCTGGGCTATGATGGTTCTGGTGCTCGGAGTAGACTTTTGACCAAAGACACACACACACACACACACACACACACACACACACACACTCTCTCACACACTCACACTCACACACACACACTCACACACACTCACACACACACACTCACACACAGACACACACACACACATACACACACACACATATACACACACACTCACACACACACATACACACACACACACACACACACAGTTTCCACACTACTGTAGTTGTGAGCCTTTCTGTGGTGTGAAATTTTCTTTTCAGGTGCTTAAGACTTCTCCACATTCAGTATATTTAGGTAGCTTTTCTCCAGTGTAAATTCAGGTGCTTAATGAGAGTAGATTTCTGGCTAAAACATTTCCCACAATCACAGCACTTATAAGTCTTTGCTCCAGTATGAATTCTATTGTGGACTTGAAGG TCONS_00087702 TCONS_00087705 TCONS_00087705 r 5' 0 TCONS_00087702 TCONS_00087705 TCONS_00087705 r 5' 0 EMBV3_43113 ATATTTTTGTCACTGCATAGCTGATAGTCTTCTCTACAACTGCTGTGTGCTGCTCTTCAC Gene GeneID:533994|SEC23A:NM_001081604:26_cdna Constitutive 0 NULL GeneID:533994 21 GENE SEC23A MGC143381 Sec23 homolog A (S. cerevisiae) EMBV3_16667 TGTGGCCCCAACACCCTGGATAACTTCTACTGTGACATTCCACAAATGCTGAGGCTTGCC Gene GeneID:512973|LOC512973:XM_002695573:88_cdna Constitutive 0 NULL GeneID:512973 19 GENE LOC512973 NULL similar to olfactory receptor Olfr464 EMBV3_07360 TAGTAGTCGCAGACCTCGAAATGATAGACGGGTAGTTGAGTTTGCCTCTTATGGTGACTT Variant GeneID:510474|SFRS5:NM_001098929:79_cdna 415^558 1 EMBV3_06501 GeneID:510474 10 GENE SFRS5 MGC166270 splicing factor, arginine/serine-rich 5 EMBV3_08811 GAACGTGACACCACCAACACTCACTCCTGGAGATCTCTGTAGACTACAATCAATCAAATC Gene GeneID:538360|GRM8:XM_002686932:40_cdna Constitutive 0 NULL GeneID:538360 4 GENE GRM8 NULL glutamate receptor, metabotropic 8 EMBV3_40709 AGCCTGCGTAACAGCAAAGAGGAGCGTATTGACCTGGATGCAGAAGACGAGGACGTTCAA Gene GeneID:282361|SLC5A1:NM_174606:47_cdna Constitutive 0 NULL GeneID:282361 17 GENE SLC5A1 SGLT1 solute carrier family 5 (sodium/glucose cotransporter), member 1 EMBV3_16595 GAGGACGGAACTGTGTTGGCGTGTTAAGTGACATGAGCAGAGTCGTGTTTCCAGTGTGCT Gene GeneID:528253|JARID2:XM_002697579:437_cdna UTR3_Alt 3 NULL GeneID:528253 23 GENE JARID2 NULL jumonji, AT rich interactive domain 2 EMBV3_38049 AACAAGGAGAAGAAAGAGGCGTTGAGCAAGTTTGTATCCTCATATGTATGCAAGAGCATA Variant GeneID:616181|UPF3B:NM_001076411:29_cdna 240^346 2 EMBV3_16803 GeneID:616181 X GENE UPF3B MGC134301 UPF3 regulator of nonsense transcripts homolog B (yeast) EMBV3_37060 GAATGTCAACGTGCAGAACTTCCACATCAGGACGACCCCGTCACCAACCTGAACAATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16383 CTCAGGGGACCTTAGGGATTGTCATCAACCAGGGACGTCAGGGGAGATTTGGAGCATTTT Gene GeneID:524357|KREMEN1:XM_002694622:178_cdna Constitutive 0 NULL GeneID:524357 17 GENE KREMEN1 NULL kringle containing transmembrane protein 1 EMBV3_41054 TTTAAAAACCGTTTTAACATTTTGCCTTTTTATGTTTTAAAAGCTAACCATTTTTATTAA Gene GeneID:539234|STAG1:XM_002685052:138_cdna Constitutive 2 NULL GeneID:539234 1 GENE STAG1 NULL stromal antigen 1 EMBV3_40187 ACAAGGAATACCTGAAAAGGAACAATCTTCGTGATTGGGTTTGTGTGGTTGCATCAGACG Gene GeneID:100336354|LOC100336354:XM_002694921:808_cdna Constitutive 0 NULL GeneID:100336354 18 GENE LOC100336354 NULL hCG15121-like EMBV3_07174 ATGACAGGGTGCCTTCAGGGAATATTAAGTTTTTCTTCCAATAACTGTGATGCAGGAATA Gene BVT0102_331763 - 0 NULL GK000007.2:77257262-77264721 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217777 TCONS_00217780 TCONS_00217781 TCONS_00217778 TCONS_00217779 1 XLOC_131575 Coding TCONS_00217777 XLOC_131575 NonCoding Coding NUDCD2 7:77264423-77265557 j TSS162097 540 1 TCONS_00217777_1 38 2 0.525154457193292 2.08701487388911e-06 1.19406682925805e-49 2.12731247341766e-74 3.17347966279724e-11 8.43344950585848e-05 9.56649792106875e-40 1.42998843390492e-72 0.000483740366238612 0.000153526653704778 1.07168073233252e-21 1.05314805079559e-05 0.00027874702837813 8.82154516092518e-73 1.45745858666693e-37 0.000135532251235688 0.00453859392772975 0.00308573385369839 0.00797121998922692 1.91326404597195e-06 0.000676896841680893 1.56304289059041e-10 0.0037971645784483 0.00183519585569481 0.00396461265051773 0.000290807573402346 0.00031418984658876 0.000226361189252418 0.000567850852361284 0.000255777010084757 0.000732767721164253 XM_005209698.1 NUDCD2 PREDICTED: Bos taurus NudC domain containing 2 (NUDCD2), transcript 0.0 893 100.00 0.914814814814815 NM_145266.4 NUDCD2 Homo sapiens NudC domain containing 2 (NUDCD2), mRNA. 9e-144 513 83.81 0.907407407407407 0 noncoding 0 0 0 0 0.552637880799915 0.110162764487214 0.00151952234166648 0.973287258531606 CTACTTGACTCTTCACAAAAAAGTGTGCTGGCCCATGCACCAGAATCCTGGTTTTGACTTCAGTGGAGCAGAAATCTCAGGAAACTACACTAAAGGTGGACCAGATTTCTCGAATCTTGAGAAATAACTGTGACCTTCTTGCTGCGTTTTGTGGATCCTAGCAGATGTTGCCAACTTAATCAGAGGAACAGATTATGTGGTGGAATAAAAATGTGGATACCTAGTTAACAAATTGCAAAATACATTTAAATATGGTTCTAAAAATTGCATTCAAATATGATTTACATAGGAAACATCTTAAATACTGTGGAAACTATTCTATTGATACGTGGTAACTTTTATTTTGGACTTGTTTTTGCTCAGCATGATGTTTTATATGCTGCACTTTACTAATTTCATATTTAGCCTGTATTTTTAATACAAAAAGTTTTAGGGTATAGATCATGTAAAATGACAGGGTGCCTTCAGGGAATATTAAGTTTTTCTTCCAATAACTGTGATGCAGGAATAATGTTCAATAAATTTTTCTAAATAGGAATT EMBV3_12384 AATGTTTTGGGTAGGCGGAAGTATGAAGTTGCCTGAGCAATGGCAGAATGTCATGGAGCC Gene BVV0102_094540 + 0 NULL GK000027.2:40235971-40950662 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156531 TCONS_00156543 TCONS_00156544 TCONS_00156535 TCONS_00156533 TCONS_00156539 TCONS_00156545 TCONS_00156542 TCONS_00156536 TCONS_00156534 TCONS_00156541 TCONS_00156537 TCONS_00156532 TCONS_00156538 TCONS_00156540 1 XLOC_095036 Coding TCONS_00156536 XLOC_095036 NonCoding Coding - 27:40607141-40611459 - TSS116885 2442 5 TCONS_00156536_5 49 0.610974610974611 3 0.435024322446143 0.0117458770126059 0.00713109124118795 0.00820076608930525 0.00812770547324047 0.00657974102892896 0.00300055315142337 0.0047644454492049 0.00761811625360455 0.0113960955242576 0.000936978465931324 6.38759676767432e-05 1.15616447039226e-17 0.00137918150017883 0.00184899426901696 0.00278899449854931 0 0 0 0.0120826793913314 0.00547552170998312 0.00440807035555481 1.71703269644471e-27 3.7351135236004e-21 6.45353041968946e-15 0.00926809549795794 0.00777754008711005 0.00479740219362494 0.000628950045606971 1.69567286535882e-25 2.20710129502742e-24 XM_005194108.1 NUDT15 PREDICTED: Bos taurus nudix (nucleoside diphosphate linked moiety X)-type motif 15 (NUDT15), transcript variant X2, mRNA. 0.0 1023 77.74 0.519246519246519 NM_178587.2 PPP2R5C Homo sapiens protein phosphatase 2, regulatory subunit B', gamma (PPP2R5C), transcript variant 3, mRNA. 7e-20 104 76.55 0.0561015561015561 0 noncoding ATTGCTCTGGAGAAATTCCATGAGCAAGGTTGCCAGCCGCAGGAATAAAGAACCGAGGGAGGATTTTGGAATCTTTCTGGGGGTGGCCAGAGTACTGCACCATCAAAAAGTGAAAAAACGAAAAGGAAGAAATTGTCCTCTGGAGAAAAAATGAAAGCATTGAAGACCCTGGGAAGACGAATCTATTCACAGAGAAGACGTTGGCAAAAGAAAATAGACCCCTCGGAAGGAAAACGGCTTGGTTACTGTTTCAGCTAAGAAGTGAGATGAGATATGAAGCGATGTTTCATTTCACGTTACCTGAAACGTCTCAGATAAAGTCTTCCCTAGCCCCTGGAACTGAATAAGGAGACACAGACAAGCCTTTATGACTAGCAGCAGAGAATAAGAGCTCCGTCTCACCGCATTTCAGCGACCTTGCTGTGTGAGTTGTTTCTTCCAGTTCTTTGGAGTGATTTAGCTGAACAGGTGCAAGTGGTCTGAAAGATAGAGGAAGAGCAAGCCACCAGAGACAAGGCAGTGAGGACTCTGTCCACATCATATTTCCGTGTTTGTTCTATTTGTCAAAGACCACCCTCCACAGTTTAAACCAGAGACACTGAACAAGACGAAAGAAAAAGAAGATAGGATAAAATAGAAATACAGCTTAAGTATATCCCCAGGTACTAAACAAGAGAGTAAATAGTTAATAATACTGTGTTATATATTGGATTGGCCAAAACATTTGTTCAGTTTTTCTGTAAGATGGCTCTCATATTGCCTAGTCATCTTTAACTTCATTCGAAACAACTTTGTTAGATTGTTTTGTGACAGCTGTCATATAGGCATGCATTAAAAAAAAATTCAAAATTGGTGAATTTTGTGTAGCCACTTCAATTTTCAAGATGGAAGAGTAAAAGCAACATTTGGGGTATAGTATGCTCTATTATTTCAAGAAAAGTAAAAACGAAACTGAAACACCAAAAAAAAAAAAAAGATTTCTCCAGTGTATGGCGAAGGTGCTGTGACTGATCGAACATATCAAAACTAGTTTGCAAAGTTTTCTGCTGGAGATTTCTCCCTGGACCATGCTTCCTGGTCGGGTAGACAAGTTGAAGTTGATAGTGATCAAATCAAGACAGTAATTGAGAACAATCAACATTACGCCACTTGGGAGATAGCCAACATACTCAAAATGTCCAAATCAAGTATCGAGAATCATTTCCACCAAGTTGGTACGTTAATCGCTTTGATGTTCGGATTCCACATAAGTTAAGTGAATAAAACCTTGATTGTATTTCCACATGCAATTCTTTACTTAAACATGAGGGAAACCTTCCATTTTTAAAACAAATTGTGACGGTCGATGAAAAATGGAGACTGTGCAAGAAAGTGGGATGGAAGAGATCATGGAGCAAATGAAATGAACCACCACTAACCAGAGGCCGGTCTTCATCCAAAGAAGGTGACGTTGTGTATATGGTGGGATTGGAAGGGAGTCCTCTATTATGAGCTCCTTCCAGAAAAACAAATGATTAATTCCCAAAAATACTGCTCCCAATTAGACGACTGAAAGCAGCATTCGACGAAAGCGTCCGGAAGGAGCCGACAGAAAACGCATCACCTCCTGTCAGGACGACACAGGCTGCAGGTTTCTCTGACGACGGTGCAACTCGGCTGCGAAGCTCTGGTGCATCCGCCTCGTTCACCAGACGCTACACCTTCAGATGTCCTTTCCTTTCGGTCTCTACGACGTTCTCTCAATGGAAACCGTTTCAACGCCCTGGAAGACAGTAAGAGGCACCTGGAGCAGTTCTTTGCTCAAAAACATAAAATGTTTTGGGAAGGCGGAAGTATGAAGTTGCCTGAGCAATGGCAGAATGTCATGGAGCCAAACAGTGAATGCATGGTCCAATAAAATTCTCAGTGGAAATAAAAAATGTGTCTTTTATTTTTACTTAAAAACTTGAAGGAACTTTTTGGCCAATCCAATATTTGACGCTGCTAACAGAGTAGACCTTAAATGTTCTCACACAAAAAAGAAGTGATAATTACGTGATGGGAGGCAGGTGGAAGCCTGTACTGTTTAATATGATATAATCATTTTGCAACATAAGAATGTATCAAATCAACACTCAGTGTACCTTAAACATACACAGTGGTGTATGTCAATTATATCTCAGTAAAGCTAGAAAAAATTTTAAAAAGAGAGTAACAGGAAAACATGTAGGGTGTTACTTGAATGTTTTTGTAAGATAGTAGAATGACTTCAACAGGAGCATCGATTTCACTAAAGTTTTATACGAAAATATCTGCAGTCAAAAGTAGTGTTCAACTCTGCATGAAAGCAAGTTACTTGATGGAGGACAGTGCCGGCTCACTCCTGGCCCCTCCAGGGAACCCCCCAGGATAACCCCCATCCCCCTTCGCCCCCGCCAGCCAAGCTCCACTCCCTCTGTGCCC TCONS_00156521 s 5' 371172 TCONS_00156521 s 5' 373454 EMBV3_05235 GCCAGCGTCGGCGCACCCTGCACCAGAATGGTGTCCGGGCGATCCCCAAAGCAGCATGTC Variant GeneID:281414|PNOC:NM_174150:37_cdna 730^787 1 EMBV3_42099 GeneID:281414 8 GENE PNOC NULL prepronociceptin EMBV3_13409 TCAAGCTACACTGAGTACGTCTTCTACCGTGAGCCTTCCAGGTGGTCATCTTCGCACTGT Gene GeneID:527830|KCTD16:XM_002689270:8_cdna Constitutive 0 NULL GeneID:527830 7 GENE KCTD16 NULL potassium channel tetramerisation domain containing 16 EMBV3_29445 CCTACCTGAGATCAGAGCTGCCCAAAGAATCCTTGCCCTGGTGAGCACCTTTCTATCTTT Gene GeneID:100139430|VN1R2:XM_002695278:47_cdna Constitutive 0 NULL GeneID:100139430 18 GENE VN1R2 BOSTAUV1R422 vomeronasal 1 receptor 2 EMBV3_11471 AGGGAAGGTGAAGTTAGGGGCCTAAAAGACTTATAAATTGGCTTCTTCAGATCCAATGAC Gene GeneID:538754|PPP1R15B:XM_002693904:248_cdna Constitutive 0 NULL GeneID:538754 16 GENE PPP1R15B NULL protein phosphatase 1, regulatory (inhibitor) subunit 15B EMBV3_03631 GTTCCTTTTAAAATATTCATCAAGTTAGTGGGGCTAGGGGGGAGTCTGCTGCAGGGAGCC Gene GeneID:505403|HDHD2:NM_001035022:47_cdna Constitutive 0 NULL GeneID:505403 24 GENE HDHD2 MGC126937 haloacid dehalogenase-like hydrolase domain containing 2 EMBV3_20313 GCCACTCCCGAAAACGGGCCCGCAAGACAGATTAAATATAAGACACCTCAACCTGTAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39473 CATGCCTGCCGTGATGATGCAGAACTACCCAGGTTCCTACCTGCCTTCCAGCTATTCTTT Gene GeneID:510374|ZNF609:XM_002690840:167_cdna Constitutive 0 NULL GeneID:510374 10 GENE ZNF609 NULL zinc finger protein 609 EMBV3_29974 CTGGACCCAAGGTGGTCCTGCATGTACTGGCACTAACCCATCCACCAGAGAAGGAGTCCT Gene GeneID:616753|CISH:NM_001046586:313_cdna Constitutive 0 NULL GeneID:616753 22 GENE CISH MGC137828 cytokine inducible SH2-containing protein EMBV3_09363 TAGGTGAGAAACCTAGGACTAAAGCACCCAAGATTCAGCGTCTCCTGACTCCACGAGTTC Gene GeneID:781851|LOC781851:XR_083668:82_cdna Constitutive 0 NULL GeneID:781851 5 PSEUDO LOC781851 NULL similar to mCG7176 EMBV3_19669 CAAGGACCTAGATCTCCAGAAAAAGCCCCGGAGAGCAATCGCCATTCCCTGTTTCGTCAT Gene BVT0102_305588 + 1 EMBV3_01374 GK000028.2:28457154-28483402 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162138 1 XLOC_099020 NonCoding TCONS_00162138 XLOC_099020 NonCoding NonCoding - 28:28481146-28482836 - TSS121470 1690 1 TCONS_00162138_3 73 1 0 0.000595753483649345 2.37832148870452e-05 0.000377825172641676 3.43959585360147e-05 8.47207523276522e-05 0.00010159719434422 6.90143569875258e-06 0 8.87056452987534e-05 1.21730907762599e-05 2.70909453230372e-06 0 2.376919416673e-05 1.39171196981665e-05 3.1933826607892e-05 0.000218794454811438 0 4.45400689023208e-05 0.000246102487656401 0.000174466652671232 3.41295376309147e-05 4.39093283276421e-06 5.97127143794677e-05 0.000575355330447245 0 8.33784182599397e-06 0.000117876377934525 1.7050567818828e-05 5.17058663070378e-05 0 0 noncoding 0 0 0 0 -0.0372459206695865 0.749623874304023 0.0235190526242397 0.658555145800926 AATTATCCAGTGCTCATTTAACATAACCCTTTCCAATTATAAAAAGCTGTGTGTGTGTGTGTGTGTGTGTTTTAAGCTGTTTTATTAACAGAATGAGACAGTGAATGAAAAAAGGTGCTTGGCACACAGTATATGGCTCCACAACACACTACTTCCATGATGGCTATTTATTGAATGAATGAATGATTCCTAGTAAACTGACCTTTCTAGAATAACTCTGGATTCTTTTGCTTACAAAACCTCTATTTTTCATAGATTAGTGTTCCACATTTTTCAGAATGTTTTTTCATGCAGGGAATGGGGGAGAGAGAAGAAAACCACTCTGTCTCTTGCTGTCTCCCCAGTCCAGTCAGCCTGGGAGGAGAGAACGGTCTTGATAAACTAATTCCCTGATCTTTACTCTGAGTGACAGAAAGACACACCCATATAGGTCACCCCAACTCTTTTCTTTTCACCTCAGTAAAGGGTAATTTCAAGAGGATGTCATCTCCCCTCAGTCTTCCAAGCACTTCACCCAACTGTTGTCTTTAAGGCTCCCAGCAAGTTACTGGAGCTGGAAGAATAGGAAGAAAGGGCCAGTGTGGAGGCCTCGAAAGCTCTGGCAGCCAAAAGACTATTCTATTTTGCAGCAGTCTTTAAGGTATCTCCTAATCTGAGTCATCTGATTTCTTTTTTATCCATGAATTTGTCTCCAGAGATGGTTCTCTCATCTGCTGGAAGCTGATGGGGTGCAGGGTTTGAATTCTGATCGTTTACAGTTTTAAGTCTTGGTTTACCCGGAAGACCCACGGGTCAGTCTTTTTTTTTTTTTTTTTAATGGGAGCGGGGTGTGTGGATGGCAGCGGCCTGACTACTCCAGTGGCGAGTGTCTTTGGTCGCACAAGTCTGCCCGGAAGCGAGGCCCGCCAGTCTGATCTGGTTAGGCTCTGGCCCGCCCCGGCACGGGAGCGTCTGATGTAAGTTTGGTTTTCTCTTCCATCAGGATTCTGTGTCCCAGATTGATAAATCTCTTAAGTAAATAAAGGTCGAATCTGTCAGAACCTCTTCTCACCGTCAGCAATCTCTGTTAGTTTTCTATATTACCGCCGTCGGGTCACATTTTCTGTGGCACCGCCTGAATGACGAAACAGGGAATGGCGATTGCTCTCCGGGGCTTTTTCTGGAGATCTAGGTCCTTGATCCTGATGCAACTCTCCGGGTCTTTTACACAAAGCGTTTTGGTGAGGACGGGCGCTAGGACCCAGCAGACGCCTTGGGTTCTCTCGCCGCTGCGGACTGGAGAGACAGCCGCACCGCAGTCGGTCCATCGGGCACGCGGGTGGGTCTGTGTGTCTCTATGATGAGAGTCAGTTCCCAGCTCAAGAACCAAGCGCTAGGAACCCGGGCCCATCAATACTGCTTTAACCACATTTCCCAAACCCTCTTCTTGTAGGCAGCTGGAAGGAGCGGACACTGTTTGGGGACCAGGCTCACATTCCGGGCACGGACCCTGGCCCCCGCATTAGTCCATCCCCTGGGGCTGGAGAGTAATAGGCGGGCGGGCAGGTGGGGCGGCCGGGAAGAGGGAGAACGGTGCCCGGAGCAGCCCAGTCTTTGCACCCCACCCCCAGTCCTTTCGTAAGGCAAGGTTAGCGTGGGGTACGTGTGCGAGAGCCGGCTGGATTAACGTCTGCTCCCGCACCGCCGTCCC TCONS_00159435 . 5' 567 TCONS_00159435 . 5' 567 EMBV3_13315 GCCTGATAGTCGAACTTCTGGAGCTGCAGGCCCTCGTTTTGGAGAACCTGGCCCTGAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11215 TCTCTAATGGGAACCCTGCAATCCTCTCTCCTCAACCTATCGGTATCGTCGTGGCAGCTG Gene GeneID:541058|RFX7:XM_002690886:13_cdna UTR3_Alt 2 NULL GeneID:541058 10 GENE RFX7 RFXDC2 regulatory factor X, 7 EMBV3_05366 TGCTTAAGGAAGAGAAGCTGGTGGAGGCAAAGCTGGAGGATGTGAAGCATCGTCTGTGCT Gene GeneID:529478|SYCE1:NM_001038149:39_cdna Constitutive 0 NULL GeneID:529478 26 GENE SYCE1 MGC133888 synaptonemal complex central element protein 1 EMBV3_40756 ACTTCAACTAGACCTTCATCCTCAGTAACAGCTCAGCAAGCTAAGTGACGCACCAGAGGC Gene BVV0102_007431 + 0 NULL GK000025.2:3427317-3438921 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34829 TCGCCTGCTGTGCCAAAACTCAGTGCCCTCAAGTCTCGGAAGAACGTGGAGAGTTTCTTA Gene GeneID:527134|LRCH4:NM_001083450:239_cdna Constitutive 0 NULL GeneID:527134 25 GENE LRCH4 MGC140386 leucine-rich repeats and calponin homology (CH) domain containing 4 EMBV3_36260 TAAGGGCAGTGCAAGAACTCAAAAGTGTTTCTACTTTCAGGCCACTCACCCACCTGCTGC Gene BVV0102_008784 + 0 NULL GK000027.2:23362083-23463380 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30691 ATTTGCAGCCTGGTCTCAGGTCTGTGCCCTTTGTTTTAGGAAGGACGGCGATTCTGAGTT Gene GeneID:100125882|AARSD1:NM_001038073:4_cdna Constitutive 0 NULL GeneID:100125882 19 GENE AARSD1 MGC134004 MGC142703 alanyl-tRNA synthetase domain containing 1 EMBV3_43090 CATAGCGCTGACCTCGCTCACCATCAAGCTGCCCTACTGTGATCCTGATGAGATTGACAA Gene GeneID:522609|LOC522609:XM_002690727:424_cdna Constitutive 0 NULL GeneID:522609 10 GENE LOC522609 NULL similar to Olfactory receptor 4E1 (Olfactory receptor OR14-43) EMBV3_12213 TTGCTTTTGGCTAAAGTCAAGACGCAGCTGCGCAGGGTCACTGCAGCCGCCCCACCGCTA Gene GeneID:789434|LCN12:XM_002691715:93_cdna Constitutive 0 NULL GeneID:789434 11 GENE LCN12 NULL lipocalin 12 EMBV3_32068 TGATCAGACCCTGACTCTACCTGGCTCCCACGGTTGCCTCTTGAGACCGTGTTCCTTGGA Gene GeneID:100296737|LOC100296737:XM_002688892:148_cdna Constitutive 0 NULL GeneID:100296737 7 GENE LOC100296737 NULL similar to nuclear factor, interleukin 3, regulated EMBV3_35578 CTGTCAGCCCGTATTTTACAAAGAGGCAGTTGGTTCTCCCTAAGTCCTGGTGCACTGAAC Gene BVT0102_101487 + 0 NULL GK000030.2:120373066-121951934 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245596 TCONS_00245602 1 XLOC_150771 NonCoding TCONS_00245602 XLOC_150771 NonCoding NonCoding - X:121165202-121180293 - TSS184332 741 1 TCONS_00245602_2 79 0.161943319838057 4 0.95115970841617 4.37696026028284e-33 0.000365763557780996 6.87946678671542e-11 0.00183195928452184 1.28058351610443e-09 0.000205949891457713 0.000180953403430037 0.000460028419247675 0.000116965198655676 0 4.66614440106396e-07 1.93019484485142e-05 1.19877897167745e-05 4.81659338812742e-193 4.04668863110716e-50 0 0 0 0.000540060288379062 0.000659736341346988 0.000202760930044553 8.9298214089916e-15 0 0 0.000534699048126619 0.000849888687358637 0.000276098786607186 0 0 0 0 noncoding 1 1 1 1 -0.000890695342220513 0.993614407852328 -0.00750839687368529 0.90627634449361 AAGGCGATGATAAGGATTGGATTCAGCTGGCTGTTGTTAACTGTGATTGGAGCCCTGAAGAAGGAAAATTGCGAGCTGAGGTCAACCAGCTCTCCAAATGTAGTGTGGAAGTCAGAATGCTCCTCGGCGGCCATTAAGGAGATTCTCATATCCTAGAACCAGAGGGCAGAAGGTGCTGAGAATCGCTACCAAGATCTGGTTTTAAAAGGGAGGTAGTTACAAAGAAGGCAGAATAAGCAGCTCCAGCAAATCCTAGGCTAAAGGAATGATGCTGGAAGTGGATTCTTCCCTAGAGTCTCCAGAAAAGAGCCCAACATTGACTTAGGCCTTCTGAGCCCCCCTGCAGAAAAATCCACCTGGACTTGTGATGATCAGAACTGTGAGGAATTAGAGGAAGGGGAAAAATTTCACTCTGCCTTGGTTCCTCCAAAATGTCTTACCTAACTGACCATTCCTCTGTAGAGTCGTCTTCAGCACTGATGCTGTCAGCCCGTATTTTACAAAGAGGCAGTTGGTTCTCCCTAAGTCCTGGTGCACTGAACACTCAGGTTTCAAAGGCACAGGAAGCACACAGTTGTCAAGAACTTCATTTTAGCCACAGGAAGAATGGAGCCACCACGTTTCCAAGCAGAGTTTTACAAGTGCTCCCTACCCTGCATCTGAGATCCTGAGCTTTCACTCAGCCAAAGTAGATGAAAGGATTTGTTAGCATTTGTCCCTGATCATTATTTAATTTGGTTG TCONS_00248158 r 5' 26816 TCONS_00248158 r 5' 26816 EMBV3_31948 CCATGCCCTGGGGTGACCCCAGCTACAAGAGCGCCTCGAGGGCCGGGCAGAACCGCATTG Variant GeneID:614210|RNF166:NM_001099134:415_cdna 628^830 2 EMBV3_29883 GeneID:614210 18 GENE RNF166 MGC160024 ring finger protein 166 EMBV3_17787 TGTCACACCCAAGCAGGTGGAGGAACACCACAAAAGCGCTCAGTTTAAGAAACCACCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28689 GGAAGAACGGGTCATCAGCCTTGGCCCTCAGGTGGCTGAAGGAGAAAATGTATTTGGTGT Gene GeneID:539005|RPS14:XM_002694560:583_cdna Constitutive 0 NULL GeneID:539005 17 GENE RPS14 NULL ribosomal protein S14 EMBV3_06741 CTGGCAGCTCAGGAAACGTCAAACTGGAGGAAAGTGCAGACAACATACTCTCCATTGTAA Gene GeneID:540760|RFXAP:XM_002691750:271_cdna UTR3_Alt 2 NULL GeneID:540760 12 GENE RFXAP NULL regulatory factor X-associated protein EMBV3_19537 GCCAAAAGTTGCTTAGGAAGCAACTAAGAGATGAGTGGGGATTGGCAGGGATTAGCAAGG Gene BVT0102_424752 - 1 EMBV3_26335 GK000004.2:108192985-108219035 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190111 1 XLOC_116146 NonCoding TCONS_00190111 XLOC_116146 NonCoding NonCoding - 4:108195673-108199089 - TSS142479 3416 4 TCONS_00190111_3 82 0.740339578454333 1 0 0.000792552587039299 0.0006273030708837 0.000296637962289436 0.00084105390541895 0.000164886000413121 0.000168590400423167 0.000268839230333532 0.00057043900605079 0.00012621186588206 1.44537318602341e-05 0 1.04674527603691e-07 0 0 7.9791227539124e-08 5.1759611806681e-05 2.16006894392452e-06 2.22022666535777e-05 0.000430938823965445 0.000884753429938595 0.000129302833516733 9.34771342378476e-06 1.46601346041448e-05 2.8197140848282e-05 0.00051846369594557 0.000622368634463144 0.000388555388723712 1.8745516558615e-06 7.10568447870655e-07 6.29547497543382e-06 XM_592211.6 EGFR PREDICTED: Bos taurus epidermal growth factor receptor (EGFR), 4e-164 583 91.91 0.118852459016393 0 noncoding 0 0 0 0 -0.0392248241823145 0.766404330697077 0.044895462055661 0.520757213593031 CTTCCCCCATTATCCTCTACGCACAACTTAAGGTATAAAAAGTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCAAAACTTGGTCTCCCCATGTTGCTCTCTCTCTCACTCTGGCTGAGTCTCCATCTGGAGCGTGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAACATCCGACTGGGGAGGCCTCAGTGTCTCCTCTCTTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCCTTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTGTATTACTCTTTATATCCTTAGTTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCTACGCCGTCTCTCCTTCAAATACCCTGGATCAGCCGGGGCTGGACCCCAGCAGCTGAGCACTGAAGAATTGATGCTTTTGAACTGGGTTGTTGGAAAAGACTCTTGAAAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAGACCAGTCCTGGGCGTTCATTGGAAGGACTGATGCTGAAGCTGAAACCCCAATACTTTGGCCACCTCATGCGAAGAGTTGACTCATGGGAAAAGACCCTGATGTTGGGAGGGATTGGGGGCAGGAGGAGGAGGGGACGACAGAGGATGAGATGGCTGGATGGTATCACCGACTCGATGGACATGAGTCTGGGTAAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTTGCAAAGAGTCAGACACGACTGAGCGACTGAACTGCACTGAACTGAACTATTATATTATCATGTAGAGTAGTTTACCCCCCTAAAAATCACCTCTTTCTTCCTCCCTCCTTGCTAATCCCTGCCAATCCCCACTCATCTCTTAGTTGCTTCCTAAGCAACTTTTGGCTTTTCTAAATGTCATATGGTTGGAAATATAACGTATGTAATTTTTTCTCACATTGGTTCCCTTCACTCAGTTGTATGGATTTAAGTTTCCTCTGTCTTTTTTTATTTTTTTCTCGATCATTCATTTTAGCACAAAGTATAATTCTATTGTCTGGATGCACTACGGTTTATCTGTTTACCAACTGAAAGACATCTTGATTGCTTCCACATTTAAGGAATTATGAATTTAACTGTTTTCAACATCTCTGTACAGGTTTTTGTGTGGACATAACTTTTCACATCCTTTGGGTAAATACCAAGCAGTGTGTTTAATAAATTGTCAAACTGCCTTTCCAAGTGATTGTACCATTTTGCAATGAATGAAAATGAATTCTCCTCACCAGTACATGAAAGTTCCTGTTGATTCACATCCTAGTCAGTGTTTGGTGTTATTTCTATTCTGGAATTTAGCCATTCTACTGAGTATAGTGATATTTCATTGTTGTTTTTTTTTTAATTTGCATTTCCCCAATGACAGATATGTGTTTTTCATATGCTTATTTTCAACCTGTATCTTTTTTGCATAGGTGCCTATTACAGTTTTTATCTATTTTTAAATTAGGTTGTTTTATTACTATTATGTTTTGAGAGTTCTTTGTAAATATGTATATTGGAATCCAGTCATTTATCCTATGTATGCAAAGATCTCTGGTCTGTGGCTTCACTTTTTAAATTTTTACTAGTGTCTTTCACAAAGCAACAGTTTTTAAATTTGATTAAACATATCGACTTCTTTAACATGAAGATGTTTGATTTTCAGTTCAGGGTTGTCATTTTGTATTTTGGAGGGAGGAAGAGTGGATAGTTCTTCTAAATCTCTTGTGTTTTACCCTGAGGCAAGACTTAACAGTGATTATTGAAAGCAGTAATCATAAGGGCAAGCCTTACAAATAAGTCTCCTACTCTGAAACAGTGCATTTTGTCACACTGAATTACGCTTTTACATCACTTATTAGCTTACATGAAATTAGTACTTGAATCCATATCTGGGAACAAAGAAAAAATGAATAAGCAGTCAATTAAAGGAAATTTCTGAGAGCCTAGATTTGCCTATATTTACTGGGAAATAAATCTAAGTGAGAAATAACAGATAGGACTAAATCCCAAGGATCCAGTATGGACAAAAAAAAGAGAATAAAACACCAAAAAAGTGCTCATTGCCAGTAGGTTTACTGCAAGAAATTACACAAAATACTTTTTCCCTTTGAAAGAAATGCTCCCTGATGGTAATGGGTGTAGTTAGTTTCTCTGAGATTTGAGGATGTTTTCTCTTTGGTCTTCTGAGTGTGACTATAATATGCCCAAGTGATGCTTTAGTTTTACTTATCCTGCCTCTTATTTGCTGGACTGTCTGCATTCATGGAAACATAACCTTTGTCATGCTGGGAAATACTTCAAAGTAGTTCCCTCAAAATGTGCATCTGTGCCATTTTTTAATTTAAAAATTTTTTTAGCTTTATTGAGACATAGTTGACACAGGACTATATAAAATATAGAGCATGATAATTTGATTTACATACAAAGTAAATTTTTTATCACAAGTTTAGTGAGCATCCATCATCTCATATATATAAAAAATTAAAGAAACAGAAAAAAATTTTCCTTGTGATGGGAGCTGTTAGAATTTACTCTTCAAACAACTTTCATATATACTATACATCAGTGTTAACTATATTTATTGTATTGTACATCACCTCTTTAGTATATATTTATCTTATGACCAGAAGTTTGTGGCTTTTTTCTGCCTTCATCCAATTGTCCCAGTCCCCTCCCCCATAAGTGGTAGTCTATAACTTTATCTCTTATTCTATGAGTTTGGTTGGTTGGTTGTTATTGAAGTATAATTGACCTATGTACTCAGTTGTGTCTGGCCCTTTGCCACCCCATGGACCATAGCTGCCAGGCTCTGCCCATGAAATTTTCCAGGCAAGAATGCTGGAGTGAGTTGCTATTTCCTACTCTAGGGGATCCTCCCAACCCCGGGTTCAAACCCACATCTCTTACGTCTCCTGCATTGGCAGGCAGATTCCTTTCCACTACCAGATTCCCAAGGCAGTACCTGGGAAGCCCTAATTGACTTGTAACCCTGTGTTGGTTCATGCTGCAGAACGTAGTGATTTGCTATTTCTGTACATTTCAAAATGTTCACCAGGAGAAGTCTACTTGTAATTTATCACTATACAGAGTTGATACTTGTTGTTGATTATATTCTCCACACTGTACATTTCATGCCATGACTCATTTATTTTGCCTTAATTCCCTTCATCACCTATTACTTTCTCCTCCCTACTCTCTGGCACTCACCTGGTTGTTCTCTTTATCTATATCTCTGTTTCTGTTTTATAATATTTGTTCACTTGTTTTGGTTTTTAAGTCCCACATATAAATAAAAACATACAGT TCONS_00182788 . 3' 2690 TCONS_00182788 . 3' 6105 EMBV3_36772 CGAAAGGGATTTCTTCTGTTTGCTGAGATTGATTTCTTCCGAACCCTTGTAGCGGCCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25246 CCAAGGGATGGACATCTTGTCATTTTTTTCTTTTTTTTTTTCTTTGACTCTTTGAATAAA Gene GeneID:504958|EIF4A1:NM_001034228:463_cdna Constitutive 0 NULL GeneID:504958 19 GENE EIF4A1 MGC128124 eukaryotic translation initiation factor 4A, isoform 1 EMBV3_30782 TCTGCGAAGAAAACAAAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCCGTGAAGACGC Gene GeneID:514555|UBASH3A:NM_001015599:32_cdna Constitutive 0 NULL GeneID:514555 1 GENE UBASH3A NULL ubiquitin associated and SH3 domain containing, A EMBV3_07588 TTCCCAATGTTCCCCTAATTGGAGACCCTCAGGTTACTGTTGGGTCCTGCTCTGGTTAGT Gene GeneID:616425|SUPT4H1:NM_001034792:66_cdna UTR3_Alt 1 NULL GeneID:616425 19 GENE SUPT4H1 MGC127279 suppressor of Ty 4 homolog 1 (S. cerevisiae) EMBV3_30380 AGAACCGAGAGTTGGGACCCTTGCGTACAGATGTGAAATTAAGATTATTGAAGACGACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04396 GTGCTCAGAGAGTACAACCCTTTTGAGGAAGAGGATGAAGAGGATGCTGTGGCGGGGAAT Gene GeneID:511484|ZFYVE20:XM_002697125:49_cdna Constitutive 0 NULL GeneID:511484 22 GENE ZFYVE20 NULL zinc finger, FYVE domain containing 20 EMBV3_31038 AAAAGCCGGCTGTTGGTATGGTTTTCCCATCAACCTGGCCCTTCCGGCCGCTCCATCCTT Gene BVV0102_425894 + 0 NULL GK000027.2:4727247-4758031 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03208 AATGAAGCTGTTCACACTTGCCCAGAACTGACAGGGTGGTGTCTGCCTTCGTTTGGCTGT Gene GeneID:507418|DDX51:XM_002694436:161_cdna Constitutive 0 NULL GeneID:507418 17 GENE DDX51 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 EMBV3_40300 GGCGTTTGCAATGAAGAAGCTACCCAGCCCTGCCTGAATCCAAAGTGTTCTTTAGTCCTG Gene GeneID:617196|SLC26A7:XM_002692821:159_cdna Constitutive 0 NULL GeneID:617196 14 GENE SLC26A7 NULL solute carrier family 26, member 7 EMBV3_26977 GTGATTAATGGTTCACTTTTAACTGACCACCAGAACACCACCTAAAATGGCTTCAGTGAC Gene BVV0101_025905 + 0 NULL GK000020.2:6657528-6661893 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114308 TCONS_00113196 TCONS_00113200 TCONS_00113193 TCONS_00113191 TCONS_00113194 TCONS_00113199 TCONS_00113198 TCONS_00113192 TCONS_00113197 2 XLOC_069265 XLOC_068968 Coding TCONS_00113191 XLOC_068968 Coding Coding FAM169A 20:6595461-6661714 j TSS84727 6532 1 TCONS_00113191_5 670 0.0332210655235762 13 0.901602970476363 0.00513739594243576 0.00478649908621073 0.00213133174123885 4.47468331629804e-07 0.00246780313231429 8.34268604311439e-13 0.00170188868030348 7.40486292588724e-06 0.00118884903953702 7.07997262634113e-21 0.000520310103863343 7.38317708776361e-18 3.97537426455892e-05 8.61012615133519e-07 0.000651762745063349 0.00591787689139225 0.000820995076694607 0.00663504225272876 4.954974332908e-07 4.00102959942598e-11 9.8823672519386e-20 0.00252357801638701 0.00448381055440541 0.00272581251563479 9.12213277805369e-06 5.30062856326677e-06 9.20621841806113e-05 9.29348421640558e-11 7.26736987214762e-11 4.25412775623807e-06 XM_005221408.1 FAM169A PREDICTED: Bos taurus family with sequence similarity 169, member A (FAM169A), transcript variant X1, mRNA. 0.0 1.031e+04 100.00 0.875076546233925 NM_015566.2 FAM169A Homo sapiens family with sequence similarity 169, member A (FAM169A), transcript variant 1, mRNA. 0.0 3398 87.54 0.422075933864054 TCONS_00113191_5 sp|Q9Y6X4|F169A_HUMAN F169A_HUMAN Soluble lamin-associated protein of 75 kDa; 0.0 1124 88.06 0.998507462686567 0 coding 0 0 0 0 -0.0545449917048746 0.729760584251091 -0.013880233845577 0.761835722916617 CGCCCGCACTCTCTACATCCCGGCCCGAGGTCGGCTGGCCTCGCCCACCCTGGAGGATGGCATTCCCTGTGGATATGTTGGATAATTGCAGTCATGAGGAACTCGAAAATTCTGCTGAAGATTACATGTCAGATCTGAGGTGTGGGGACCCTGAAAATCCAGAACGTTTTTCTCTTCTCAATATTACGATTCCTATTAGTCTGTCAAATGTAGGCTTTGTACCTCTCTATGGTGGAGATCAGACCCAGAAAGTTCTTGCTCTTTTTGCACCTGAGGATTCACTCACAGCTGTGGCACTTTACCTTGCTGATCAGTGGTGGGCTATTGATGATATTGTGAAAACATCTGTCCCTTCTAGAGAGGGGCTTAAGCAGGTGAGAACTCTTGGGGAGAGAGTGGTTCTGTATGTTCTGAATCGAATTATTTATAGAAAGCAGGAAATGGAGAGAAATGAGATCCCATTCCTGTGTCATAGCAGTACTGATTATGCTAAGATTCTGTGGAAGAAAGGAGAGGCCATTGGGTTTTATTCAGTTAAGCCTACAGGAAGCACATGTGCCTCGTTTCTTACCCAAAGCTACCAACTGCCAGTTCTGGATACAATGTTTGTAAGAAAGAAATATCGAGGCAAAGACTTTGGGCTTCATATGCTGGAGGACTTTGTTGATTCCTTTACAGAAGATGCACTTGGCTTGCGGTATCCCCTTACCTCTCTCATGTACATAGCTTGCAACCAGTACTTTGAAAAATATCCAGGAGACCATGAACTGCTTTGGGAAGTTGAAGGTGTTGGACACTGGTACCAGAGAATACCAATCACCAGAGCGTTACAAAGAGAAACACTTAAAATTACAGCAATTTCTCAAAATGAAGCTAAAAGATCTACATCTGGAGAATACAGTCTTGCCTCTGTTCCAGAATATGAAGCTAGAGCTGAAGACAGTCAGTCTAGTGAGATGCAGCTAACTATTGATTCCCTAAAAGATGCCTTTGCAAGTACTTCTGAAGGTCATGATAAAACACCTGTTTCCACTCGTACTCGAAGTAGCCATCTAAAGCGGCCAAAGATTGGAAAGCGGTTTCAGGATTCCGAGTTTAGTAGTTCTCAAGGGGAAGATGAAAAGACTCCTCAGACTTCTCCCACAGCTTTAGTGAACAAATTGGAGTCTACTGCACGCACCTCAGAGAGCTCAGAAGAATTCTTGGAAGAAGAACCCGAACAGAGTGTGATTGAATTTGAGGATGAAAGTAGTGATAAAGATGTTGAACCAGCACCAGAAACCCAGCCAGGCCTGGAAAAGCAAGAAGGTGAAAAGGAATCTGCATTAGAGCCTATGAATGGTGAGATAATAGATGATACTCTTAAGACTTCACTCATAACAGAAGAGGAGGACTCTACTAGTGAAGTTTTAGATGAAGAATTAAAATTGCAGTCTTTTAATTCCAGTGAAGACTCTCCGAATCTTGCTCCACTGGTGGTAGACTCTTCACAACCCCTTGAGGGTGTTGCACAGGATAAGACTTCACATGCAACTGACTCAGAAACGTTGCTAGATGAAGGTCCGTCTGATGACAAGGGGCACACCGAAGAGAAGCTGCCTCTAGTTTCAAGAAAGAAAGCACATTTTGGGAGTTCAGACAATGTGGCTACTATCCCAAATGAAGACCGGTCCGACAGCGCTTTTCCAAACTCTGTGATTGCTGAATTTTCTGAGGAATCGATCCCTGAAAATGTGTCACCCAACACTACTGCCTCATTGGAAGACCAGGGTGAGGAGGGGGTTGCCGAGCCCCAGGAATCATCTGCAGCTCTGCCTCAGAGCTCTCTGATAGAGGTTGAACTTGAAGATGTGCCGTTTTCACAGAATGCAGGACAGAAGAACCTGTCAGAGGAGCAGTCTGAAGCATCTTCTGAGCAATTGGATCAGTTGACACAATCAACAGAAAAGACTGTGGACAGCAGCTCCGAGGAGATAGAAGTGGAAGTGCCTGTGGTTGACAGGCGGAATTTGAGAAGAAAGGCCAAAGGGCATAAAGGACCCGCAAAGAAGAAAGCCAAGCTGACCTGAATGAGGAAGAAATGCAGATGATAAAACCTCTTCTTTGTAATAAAATTGTTGTTTTTAAAATACGGCGATTAATAAATAGCATGGGGCACAGGACAAAAATTCCAAATTTTCAAGTTGAACTTATTTATGATGCTGCTTTTCCCTCCCCAGTAGATCCTAGGATTCACTATTCTTTTTAATTTTTCAGGCTATTTTTGTGTAAATACAATTTTTTTTTAATTTCTATTAACCATGTTTCAATTTGGGGAAACCAGATCATACTATATTTTCTTTAGCAGTTGGAGATATCTGACCATTATTATTTCAGAAAATAGAAATTTAAAAACTATGAAAGTAGTAGGGCTTCCATCAATTGTAAGGATCACAGACATCTTTTATACTAAGGGTTTTAATAGTAATCTTGGTGAAGGTTCTAGAAGTTTTATCTTAAATTTCAAAACTAATCACCATTTTTTAAAACTAGGCATGCTTAAACAAAAAGATCAGTAAATTAGGGTCAAAGTAACTTCAAATGAGAGCACAAATTCAGCAATTTATGGTCAGAGGTTTTCGAAGGTGGTATTTTTGACCTCTTAGTTCTTGATTGTAGGTGCAGTTTCTTCCTTTGACTTGTCTGTGGAGAAATACAAACATAATCTGTTTCCACTTCACTCTTGATAACATCTGATATTAACAGTACTGCTCCGGATTTAACTCTAGTAGTGTAGGCACTAGCATAATTATTTAAAATTTCTTTTGAAGCTGGGGGTTGTATTTTTGTTCTCACCCAATTAACATGTATACTTCAGAAGTATGAGAACCCTTCCTAAAGGGTTCTCCTTAATCCTGACACTGCCTTTATTCTAGAATCTTGTTTATATTCCCCTCAGCTTTTGTCCACTTCCCTAACTGACGGAGTGACTCCTGTCCAAAGATCTCTCTGCCTGCCTACCAGCTTGTGCCCTTGGCTTCCATTTTTGGTAAGTTTAGAACTGCGCCCCAGTCGTAGGCCTAGATGGCAGGAGTGAGTGGCCCTGGGAGCCGTAGTTGCAAGAGTCTAGTCCCTGTGAGCTTGCTCACCCTTGATTTGTTCTGTGCAGAGAAGTTACAGGCTAGCCTGTGTGTACATTGTGTTGCCATAGCAAAGGCCTTTGCCTGGGAAAACCAAAAACAAAAAATTTAAAAACACATCCTCAGTTGTTTATTTTTGTATAGTAATTTATTTAAAAGTGAACAAAATGGTCATTCAAATCCAAAGAGAATCTTAAAACAGTCCTATTCTTTGAAAGTATTACGTGTGCTCAAATTTTCATTCAAGTTTGAGAATGCTTTGAGACCATTTAGATTGTTTTTAAAACTGCTTGGTCCTTACATGAAAAGTGTTATGGTTTTGTGTCATTATTTGAGGTGTCAAGTATTGATGTTGAAGGTTTATTCAGTCTATAGTCAGGTGATACTAAATTTTATTTTGGGCTGTTGGCATTTTAGGAAGATTTAAAGTTGAGGTAAAATCTTCAGTAGGCAAAATAGCAAACCCTCCTTATTCATGTAAAAATTTGAGTACTGTGTCCCCTCCATTTTCTTTAATATTATGGTCAGAGTTAGCCCAGATTATTCCATTCTAAATGAAAATTAAGCACTTTGGCCATTTGTTTTCTTAACAAATGCTAGTCAAGTGAAAGAATAAGTGACGAATGCTAGTGTACGTATTGAATGTTTATGCTATTTTATACATTTTGTGAGAAATTTTTGTTAATACCACAGTTAGGGAAATAGATTCAGTAAATTCTTAAACCTTTCCATTTTTAATTTCTTAAAACAGATTTAAAAACCTAACATTTACCTTTTTTTAACTTGGATTCTTCATTGTTCTTTAAAATAGTTTTCTTTAACAAGATGTAGTTTAAGACTGAGCTCACTGACATCTTTTGATGTGTGAATATAGTTGCTGAGTTTACAGAAAAGAAATGGATATTCATATGTGATCACTAAGGACTCGCTGTATAAATTTATACTTAAACTTGTTTGGTTTATTCTTAAACCATAAGCGCATTTTAATCAAGTTTCAGAATTTTTGTTCACACAAGAAAAATTCTGTCACATATTATCTCTGACAGAAAATGGTATTTTGGAGTTTATAGATAGCAGAGGGAAAAAAGTTAAGTCACATGGAAAAAATCTAACTCACAGGGAGAAAACCTAACTTTCATGTTCAGTAACAATGAGTTCTATGCTCAGTGAGTAAGTGTAGAATTTATAACAAAATTTATCCTCAGTTAGGACTCTAAATAAAACTTAATCAGATTACCTGTAGTTTTTGCAAAAGGCATTAGAAAAACAGAATTACAGAGGACTGAAATCTGATTTCAACCAGGTAGTTGAGTGTCCAGTCACATTCTTAGAGTTCTTTGTGAACTGCTTTTTTCTGTTTAGAAGTCTTATGTGTGGAGAAGGGAGTTCACTGCAGTTTGTGTAAATACATATATATTTCCTTGTGTAATATAAAGCAGACAGTTATTAGCAACATTTTAGTCCTACTTTCAAGTTTATTGCTAGACATCACAGAAATATATTTAAGAATTTATTATAAAGTTCCTCTACAACTTTTGAGAGAGAGGGTCTATTATGATTTTTTTATAAAATCAAAAATAGCATGACAGAATGTCAATCTTCTGCTACTTAAAATGTGTCTATATTCATGGTGTTTCCACTCAGTGCAGAGAATTATGGCAAGGATAAAAACTACTAGTGATTAATGGTTCACTTTTAACTGACCACCAGAACACCACCTAAAATGGTTTCAGTGACTTTAGAAAAATATTTTGAAGGTTTATGATTGCATCAAGTTGAGCGTTTATCTGGTACCTGAATATCTGCTCTTACATTCTGCTTTACCCTTAGGGATTACCTTCTAAGGTTTGGTCACACCAGCAAACTGAGACAGATCTTAATGTAAATAAAGAATTTATACTAACATGACTCATCTGTGTAACAGTATTTTAGACATTCTGCCTTGTTTGCCCACTAGTGGCGGTACTGTGTTTAAGGTGTTAACCCAGCCTTCCATGGGTGTGGCTAGTTAGTAATGTTTATGCTTCTCTTCACATACTTAGTATCAAGCTTTATTTGTACAAGATCGTTAACTTGCTTATTTTTGGTTGTGAAAAATAAGCAAACCTCAGCTCTGTATCCAGTGCTTACCTTTAGTCTATTTTGTTTCACCCTGCAAAACTTGTCATTCACTCATTCCCCATTTCTATTAGTGGCAAAATCATTTGTTAAAATCTGATTGTAAGGTAGGTTCCTCTTATGTTATCCTGAAGTAATTGTATCATACTGGATAGTCATTCCCAAGGAACTAGCCTTTCTTTTCCTAAGTGTTTGTGTGTTCCAGAACTTCTACCTACTGCTTATAGAACTTAGGAAAGATGTTACATTCTTTGGAATAGCAAGACTTACTCAAGTACTTACGTTTGTTTTCTTGGTAGTTTTTTTTTTTTTTCCAATTTTAACAGTAGTAATTAAACCTATATTTTGTGATTGTCTATGTTTTGAAATACCTTCCCTTTTCCCTAATTTCATTGGTAAAGATGTGTTTAGATACTGGATTTGTTTACACTGATTTTGTTAAAGCCACAATTAATCACAATGGTTGTACTTTCAAGACAGACTTTAAAAAAAATAAACAGAATTGAAAAAAATTAATGTGATTATAAATTAATACAATATATAAACACACTAAAGCTCAGTCACAAACATACTCAGATCACAGATGTGCTTTTGACTAAAACATGACCTTCTTAATATTATCTAAGTAACTGCAAATATATTTATTTCCTTTTAAGGGCATTAGTGCAGTCTTTTTAAAACTATTTTATCTGGAATTACTTAATTTTTACCATTCTAAAAATATAAATATGCTACCCTAAGAAACTCTAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTGATGCTGGGAGCGATTGGGGGCAGGAAGAAAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACCGACTCGATGGATGTTGAGTTTGAGTGAACTCCAGGAGTTGGTGATGGACACCAACTCAGACACGACTGAGCGACTGAACTGAATTGAACTGACCCTAAGTTTAGAATATAGACAATGCTAAAAGTATAAACATTTTGGTTTATTTTTTTAATGCGTCTTGAGTAGAAAATATAGTTCCAAGTATACGGTATTATATATGATGACTGAGAAGGGAAAAATGTTTAAGATACTAATTCTCTGACTTACTATCATTCTTTTGAACTTTATAGTGTAATGTGCCATCTCTCGTACACTTTTAAAGTATTTTCATTAAAATGTGTTAATGCTGCATGTCTTTGGATTAATAATCTACAGTGAGGAGAAGACCTAAGGTAAGGTCTTAGACATGACAAAGTTGCTTGGCCTATTCTTCACATTTAAATGTGCACTA EMBV3_23984 TGTCTTAGTGCACACGAGAGAAGCCGCCACTCGCAACATGGAGAAGATCCAGGTCATCAA Gene GeneID:506605|MAD2L2:NM_001045946:37_cdna Constitutive 6 NULL GeneID:506605 16 GENE MAD2L2 MGC137331 MAD2 mitotic arrest deficient-like 2 (yeast) EMBV3_36564 CAAGTCAGAAGCTAATCTCTGGGCCTTGGGGCTGTGAGGGTTCAATCTCGTGGAAATGTG Gene BVT0102_141047 + 0 NULL GK000011.2:105519306-105541712 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029413 TCONS_00029410 TCONS_00029407 TCONS_00029412 TCONS_00029404 TCONS_00029408 TCONS_00029406 TCONS_00029402 TCONS_00029403 TCONS_00029409 TCONS_00029405 TCONS_00029411 1 XLOC_015737 Coding TCONS_00029412 XLOC_015737 Coding Coding ARRDC1 11:105539236-105550316 j TSS20456 4078 2 TCONS_00029412_6 145 0.13241785188818 8 0.632638324758552 0.000167536978560173 0.000472111824254435 4.22553024693569e-10 2.32153794770765e-10 7.51742135141406e-06 2.67899382642813e-10 0.000144857883865222 0.00018604674435394 7.58843723534685e-28 1.25687065416499e-23 1.03041700098592e-12 1.49047915415077e-13 3.97059240017479e-13 6.07236317577853e-13 2.32129749375033e-05 3.14814273176462e-33 9.23112905746475e-49 5.71668244740209e-12 8.1857230188145e-05 0.000141579161143555 3.76275679225934e-05 1.27033451083993e-55 7.03778679062592e-28 1.14546684607946e-26 5.85810003359497e-05 1.15504121808716e-11 6.43472616225004e-05 1.18549470433096e-106 2.73414533544173e-06 1.14565448263329e-09 NM_001080365.2 ARRDC1 Bos taurus arrestin domain containing 1 (ARRDC1), mRNA. 0.0 2536 100.00 0.344531633153507 NM_152285.2 ARRDC1 Homo sapiens arrestin domain containing 1 (ARRDC1), mRNA. 0.0 1402 83.89 0.310691515448749 0 coding 1 1 1 1 -0.0240513383026058 0.81408778085006 0.00929658798429839 0.838926716571825 CTCTTGCCTCATCAGAGTCCCAGGTGGGCCGGTGGGCCTGGAGCCTGCGAGAGCCCTGGTTTCAGGATCTCCCTGGCCTCCGGGGACCCCTCAGCCTCTAAGACTAAGGCCCCTGCTTGTCACTGGAGGCCTAGATTAGGTTTCTGCGGCTCTCACCCCCGATTCTGATGTCATCAGCGTCCTGAATAGAGTCACCAGCCATCCGCGTGACCTGCACGGGGTCCTGCAGGGTCTCCAACAAGGCCAACGACTCGGCCTGGGTGGTGGAGGAGAGCTACTTCAACAGTGCCCTGTCTCTGGCCGACAAGGGGAGCCTGCCTGCTGGAGAGCACAGCTTCCCCTTCCAGTTCCTGCTTCCTGCCACGGCTCCCACGTCCTTCGAGGGCCCTTTTGGGAAGATTGTACACCAGGTACGGGCCACCATCGACACACCACGTTTTTCCAAGGATCACCAGTGCAGCCGTGTCTTCTACATCTTGAGCCCCCTGAACCTGAACAGCATCCCAGACATCGAGCAACCCAATGTGGCCTCCACCACCAAGAAGTTCTCCTACAAGCTGGTGAAGACGGGCAGCGTGGTCCTCACGGCCAGCACCGACCTCCGAGGCTATGTGGTAGGGCAGGTGCTGAGGCTGCAGGCAGACATTGAGAACCAGTCAGGCAAGGACACCAGCCCGGTGGTGGCCAGTCTGCTGCAGAAAGTGTCCTACAAGGCCAGGCGCTGGATCTATGACGTGCGGACCATCGCCGAGGTGGAGGGAGCCGGCGTCAAGGCCTGGCGGCGGGCTCAGTGGCAAGAGCAGGTTCTGGTGCCCGCCCTGCCCCAGTCCGCCCTGCCAGGCTGTAGCCTCATCCACGTGGACTACTATCTGCAGGTCTCCCTGAAACAACCGGAAGCTGTCGTGACGCTGCCGGTCTTCATCGGCAACATCGCTGTGAACCATGTTCCATTGAGCCCCCGGCCAGGCCCCGGCCTGGTGGTGCCCTCAGCGCCACCCCAGGAGGAGGCGGAGGCTGTGGCCAGCGGCCCTCACTTCTTCTCGGATCCTGTCTCTCTCTCCACCAAGAGCCACTCCCAGCAGCAGCAGCTGCATGCAGCCCTTGGCTCTGTGCCCCATGGTGCCCCAGAACCCCGTCCTCAGGATGGCAGCCCTGCCCCGCACCCTCTGCCACCTCCCTTGTGCATCTCCACAGGTGCCACCGTGCCCTACTTTGCAGAGGGTTCTGGAGGTCCGGTGCCCACCTCCAGCACCCTGATCCTCCCCCCAGAGTACAGCTCGTGGGGCTACCCCTATGAGGCCCCGCCGTCCTATGAGCAGAGCTGTGGTGGTGTGGACCCTGGCTTGACCCCGGGGAGCTGACCCCATGCCACCTCCTCTGGATGGGCGGCCCTCTGCCCTGGGACTGGGCTCCCAGGACCTCGTGCCTTCACTCCTGGCCTGGCCCGGCCCACTCAGGACCCGCTGCTGCCCGCTCTTCCCGTGGCCTCTACCTCCGGACCAGCCTCTGCCCCGGCCAGCCTCCTCAGCTCCCCAGCAGTCGGCCTCTCCCAGGGGGTTGGGGCCTAGAGAGACGCGGTGTAAATAAAGTGATTCATTTGTAGCGCTGGGCACAGTGGCCTGTTGGGGCCCTCCTCTGCGGGGTCTGTGTTCCCCGCCAGTAGGGGGTACTGGGCTTCCCAGGTGGCTCTAGTGGTAAAGAACCACCTGCCAATGCAGGAGATGCAACAGACCATGGGTTTGATCCCTCGGTTGGGAAGATCCCCTAGAGCAGGGCATGGCAACGCATTCCAGTATTCTTGCCTGGCGATTCCCATGGACAGAAGGGCCTGGTGGGCTAGTCTACAGGGTCATGAAGAGTTGGCTCCCCCGGACCTGGGGGTGTGCCCAGCCCTTCCCACTGTACACAGCCCCCGATCACGACGCCCGCCCCCCGCTGGACACGCCCCTCACCACCACACCCCTTCTCCTGGACACGCCCCTCCCCAGACACGCCCCTCCTTGGCCCCGCCCTCGCCCTCCGTGCCCCTCCTTTCCTCTCTGGGTCCCTTATACTTCCGGGCGTCCGGACGCTGGCTGTTGGTCGCTTCGGGCTAAGCAGGAGTGCCGATTAACAAGGGCTGGGGCTGGCGTTTGGCCTCCCGGTTCTGCTTCAGGATTTGACTTCGGAGGCAGTTTGCATGTCTGGAGCCTCAGCGTTAAAGTGGCCTTGTGATAAGGCGAGAAGGCCACCCCTGTTCCATTTTGTTAGCACCAATCGCTCCAGGCAATGCAGTTTAGGAAATCCAGTCAGGGTGAGGCTTCCCCAAGTCCCTTGCCCTCAAACTCTGTCCCTGTTGGCACCGCAGCCAAGTCTTAGTTCGGAGGGGTTCAGCTTCTCGACTCCCATCCGTGTGTGAACACACAAGCCCGCTCCCGAGCTCTGCAAAGGACTGTTGTCTAGGACGCAAGGAACCCAGGAACAAATAAAAAGGCAGGCTTTCCCAAAGGGGTATTTTGCAGAGTTCCAGAGTGCCCGTGAAAGTCCTGCAGGGCCAGGATCCTGGCGTGCTTTGGGAGACCCTGGAGGTGGTGTTACTTCAGGTTCAAATTCTAGCTCTGCCATATGGTGAAGGAGTCACTGGCTAGGTGTGTCAGTTAACTTTATGATAAGCTCATGGGACTACAAGGGGACAAGTCGAGTGCCCCCACCCCAGCCCCCGGCCCCGCAACATTACAGAAGTTTATTTCTTGCACATTTAATAGTCCGGAGATGGCATAGCTGTCATTCTCAAGTCGAGGGTGAAACGGCTGGCAATTCTGTCATCCAGGTTACCAGCTTCACCTCCCACTTTCTGGGGGACAGTAGTATCACTTTGGCAAATCCCATCGGCCATCCTACCTGGAATGTGCAGGCAGCTATGCACCCTAAAACTTGACTTTACTATTTGTGGGACAAGGAGAAGATGAATACTGGAGAAAAGCACAAAGCATCTTCAAGCAGGATGACCTGTGAAACAGCTACTAGAAGCTGTAGCCTCACAGTCGAGACTGCGTTTCAAATCCCATCTCTGCTTCTTGAGAGTCTTAACCTGGAAGGCACCTCCCACCCCCTTTTATTTTGCTCACTGACAAGACCGTGGATAAAAATGACGTCCACCTCTGAGGACTGACCTGATAGTCACAGGGACAGCACGTAATGCGTCATCAGTGAGCAGGGATAACACCATGTAGGGTGGCTTGGGCTGACCGTGCAAAACGGGAGCATTGCCTACTTCTGACACATTCATTTACGGTCGATATTTGCCTAGTAAAATACTTTCTTCCACATCTTAACTCTTTTATTCTTTCAACAAATATTTGTCCCCTGCCTGCCAAACATTGTTCTAGGTACTAGGGCACACAAAACAAAAATCTCTGACCTTTTGGACTTGAATTCTAGTGGGGAAGACAGACAATATGGCAATGGAATGCTATGGAGTAAAATAAGAAGGAAGTTTTGGGGTGCAGTAGTATTTTTAAGTAGGTGCAAGGATACACTTCCCTGAAGAGGTGGTGTTTAAGACCTAAGGATTGTCAAGAAGTGAGCCACAGATACCTGAGAAAAAAGTGTTTCAGAGAAGGGGCAGACTAGGGCCCAAGGCAGGAGTGGAGACGGAGATGGCACCAGAGAGGCAGGTGTAGGTGAAGGCTAGCTTGGCTGTGCAGGCCAGAGGACAACTCCTGAGCTGCCTCTCCTGAGGCTCCAGATAGAGCTTGGGGTTCCCGGCCTGTCGGAAGTTGATTTAGGTTGCCCCCAGCCCCTAAACCTGGGGAAGGCTTCCTTGGTACTTAGGGTCGTCCACTGCCTCCTCTGCAGCTGTGGGCCCTCTCAATGCCACATTTCCACGAGATTGAACCCTCACAGCCCCAAGGCCCAGAGATTAGCTTCTGACTTGGGACCTCCTCAGTTCCTGTCGTGAAGACCGGCCGGAGAACCGCAATTTCAGTTTATGAGTCTTCTCTCAACTCCCAAGGCATGGAAGAAACGGGTGGAGCCATGCGGAGTGGGTGGCCCAGGCCAGTTTGTGTGGTGCTGTCCAGTAAAGGCTGCTTGGGTG EMBV3_19357 CTGAGTTTCAGTGGCAACAGGGATGTGTTGTGCAGGCTGAGCAGAGATTGAGGGAGGTAA Gene BVV0102_421685 + 1 EMBV3_19251 GK000003.2:101813922-101816843 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174308 1 XLOC_104578 Coding TCONS_00174308 XLOC_104578 Coding Coding RPS8 3:101816373-101819403 j TSS129385 1082 2 TCONS_00174308_3 75 5 0.644437107956421 1.97011538089986e-26 2.12956765246567e-20 1.35588900148082e-05 1.15311997930644e-05 0.000126454878778371 5.35314194247288e-06 6.29905447289736e-05 5.0911298190009e-05 8.72472242006139e-05 0.00168672726447721 0.00161271358979624 0.000538504207409888 0.000271493984625827 0.00387691527513592 0.00031587176455544 0.0226459124800703 0.0134408370539439 0.0187299601563883 0.000356069417961653 9.26693862771349e-05 2.68145749647136e-05 0.00608403629094672 0.00801715910950608 0.0104776170708042 0.000175937313164339 3.16110621672205e-05 5.26704168538665e-22 0.00134445673703099 0.000512229688102051 0.00150680616549962 NM_001025317.1 RPS8 Bos taurus ribosomal protein S8 (RPS8), mRNA. 0.0 850 100.00 0.434380776340111 XM_005271099.1 RPS8 PREDICTED: Homo sapiens ribosomal protein S8 (RPS8), transcript 0.0 747 84.65 0.55822550831793 0 coding 0 0 0 0 -1.30135710051721 0.00870206078179431 0.0224573174592879 0.673528709487343 GCGTTTTCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACAACTGGCACAAGCGCCGTAAGACCGGGGGCAAGAGAAAGCCCTACCACAAGAAGCGAAAGTATGAGCTGGGACGCCCCGCTGCCAACACAAAGGTTGTACACGCAAGACAAGAATAATCGATGTTGTCTATAATGCATCCAACAACGAACTGGTCCGTACCAAGACCCTGGTGAAGAACTGTATTGTGCTTATCGACAGCACACCGTACCGACAGTGGTACGAGTCCCACTATGCACTGCCCCTGGGCCGCAAGAAGGGGGCCAAGCTGACTCCTGAGGAGGAAGAGATTTTAAACAAGAAACGATCAAAGAAAATTCAGAAGAAATACGATGAGAGGAAAAAGAACGCGAAAATCAGCAGTCTTCTAGAGGAGCAGTTCCAGCAGGGCAAGCTTCTTGCATGCATCGCTTCAAGACCAGGCCAGTGTGGCCGAGCAGACGGCTATGTGCTAGAGGGAAAAGAGCTCGAGTTCTATCTGAGGAAGATCAAGGCCCGGAAAGGCAAATAAACCCTCTTCTCTCCTGTCTTAGCTCATCTAATAAAGGCGTTTACTGTTCTATGCCATGTTCATGTTCTGAGAGTACTTCATTGTTTGGCACACTATAGAATGCCCCAGTTCCCCCTGCCTGAAGGCCAGGCCTGTTACGGGGCTGTGACTCTAGCCGGAGGAACAGTTCTCGCTCCTGAGGCTGAGTTTCAGTGGCAACAGGGATGTGTTGTGCAGGCTGAGCAGAGATTGAGGGAGGTAACCCAGCTTGGGGCCCCTGCAGTATTGGGCTGTTGCCTGGACCATCATTGGAACCAAAGCCATGTTGCCTCCCTAAAGTTCTTTTAGAGACCCTGTATGCAGACTTTGGTTTGGGGTTTTTTTCAGGCTCCTGGTCTAGAAACCTTGAAATTGTGTTCTACACTTAAGCATTGTTGAGCAAGTTATACATATTAATTATCTCTTGAGCTCTAATCCTTTCCCCTCTCCTTACTCAAAAGTTAGTTTGTTTAAATTGTTGAATTGGTTTCTTCAGCTTTCCCTTTT EMBV3_02135 CCCACTGAGCCACTGAACTGGAACACAAACCTCAATTATATGGAGCCAGGTGACCAGAAG Gene BVT0102_273519 + 0 NULL GK000011.2:6238940-6278847 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18247 TAGACTCTTTTATTCTTTCACGGCTACAGTTAATTTTCATGTCCCCGTGAGCAGAGCTGT Variant GeneID:613818|TBPL1:NM_001076290:8_cdna 864^977 2 EMBV3_26229 GeneID:613818 9 GENE TBPL1 MGC134257 TBP-like 1 EMBV3_11565 AGGGCATGACGCTGAAGGTGTTCATGATGCGGTCGGGGTACTCCTCGCGGATCTTACTAA Gene GeneID:100313097|MIR220C-1:NR_031231:179_cdna Constitutive 0 NULL GeneID:100313097 23 GENE MIR220C-1 bta-mir-220c-1 microRNA mir-220c-1 EMBV3_22261 TTTTTAGGTGATTTCCTTCCTGCCAGGCTCCGTTGTAGGGGTTACAGAACAGTCGTTCCC Gene GeneID:538594|CREBZF:NM_001099088:32_cdna UTR3_Alt 2 NULL GeneID:538594 29 GENE CREBZF MGC155163 CREB/ATF bZIP transcription factor EMBV3_36249 CACGATCGTCGTCAACATTTGTAGCCAAAAGCGACATTGTTTATTAACTGGTCTGTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28422 AGGCTCCGGCGTCGTAAGTACTACTACTTACTTCAGGTTGTCCGTGACCACTGGGTACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27736 AATCAGTTATAGCAAAGACTTTGAAAAAAATGTACTTGCCGAAAAGTAGCAGGTCCAAAG Gene GeneID:518522|OSTM1:NM_001075776:29_cdna Constitutive 3 NULL GeneID:518522 9 GENE OSTM1 NULL osteopetrosis associated transmembrane protein 1 EMBV3_30396 GCAGCATTCCCAGAGGATTCAGTACTCAAGGTGAAAAATTAGATAATTTTCAAAGCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06140 TCCCACCTAATTGCAGTGGCCATTTTCCAGGGAACTCTGCTCTTCATGTATTTCAGGCCG Gene GeneID:789300|LOC789300:XM_002693617:141_cdna Constitutive 0 NULL GeneID:789300 15 GENE LOC789300 NULL similar to olfactory receptor, family 5, subfamily W, member 2 EMBV3_00399 GTGTGATCCTGGTGGCCTATACTCCAGCCTTTTTCTCCTTCCTTACTCACAGATTTGGAC Gene GeneID:530990|LOC530990:XM_002707701:298_cdna Constitutive 0 NULL GeneID:530990 15 GENE LOC530990 NULL similar to olfactory receptor Olfr607 EMBV3_21210 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18396 GCAGAGGTGGCCCTTGCCAACCTAAAGAGCAAGTATGAGAACGAGAAGGCAATGGTGACT Gene GeneID:282447|BICD2:XM_002689839:6_cdna Constitutive 0 NULL GeneID:282447 8 GENE BICD2 KIAA0699 bicaudal D homolog 2 (Drosophila) EMBV3_15621 GAGGGGTTCTGCTATCCCCTGCATGTGCCCCTGCCTCACCTGTCACCATGTTTTTTATAT Gene GeneID:514409|KCNH3:XM_002687285:178_cdna Constitutive 0 NULL GeneID:514409 5 GENE KCNH3 NULL potassium voltage-gated channel, subfamily H (eag-related), member 3 EMBV3_07851 ATGATCTTCCCGCAGCCGAATTACGCGGACACGCTCATCAGTCAGGAAAGCTGTGAGAAA Gene GeneID:100337166|LOC100337166:XM_002689260:175_cdna Constitutive 0 NULL GeneID:100337166 7 GENE LOC100337166 NULL protocadherin gamma subfamily B, 5-like EMBV3_05399 TGCAAGACTGTGCCCTTCCCCTCCTGAAAGGTTATTGTGGTGGGAAATCCAGCCAATACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22314 CGAAGCCTGGCTTGTCCACAAGACAACCCCGTAAACACCTTTGTAAAGAATCTATAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30924 CACCTTGGCACCACTGTCTGGGATTGCTACAGCCATTCTTGTGTTAGTTACTATGGGACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23940 CCTGTGTGGTACCTGAAGGAAGAAGACCACTACCAGCGTGTGAAAAGGGAAAGAGAGAAG Gene GeneID:540513|RHOBTB1:NM_001082453:16_cdna Constitutive 0 NULL GeneID:540513 28 GENE RHOBTB1 MGC152114 Rho-related BTB domain containing 1 EMBV3_03092 CAACACCATCAGACTTGTGTGCGAGACAGAGCCATTCGTTCTATCCTGGCTGTTAGGAAC Gene GeneID:514014|XRCC6BP1:XM_002687554:566_cdna Constitutive 2 NULL GeneID:514014 5 GENE XRCC6BP1 NULL XRCC6 binding protein 1 EMBV3_01282 CCATGGATCACAAGATACCCAAATTCCAAGAGCCCCAGTCCCAAGGGAACCCCAAATCCT Gene BVT0102_063458 + 0 NULL GK000018.2:46875885-46876979 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086369 1 XLOC_052136 Coding TCONS_00086369 XLOC_052136 Coding Coding CLIP3 18:46876306-46890122 = TSS64282 3306 1 TCONS_00086369_5 547 14 0.761708288092653 3.96555680388175e-05 4.66864814863005e-10 2.69374928720252e-05 9.29382229145451e-05 0.000114991819993994 2.27217735930864e-05 2.5846780099401e-10 1.62644552324558e-05 4.53456241698105e-05 1.99145576290236e-10 1.10495423182277e-10 1.08157453688025e-06 0.000188045477983826 0.000102315468302674 9.77949495465485e-05 3.19559517047518e-05 0 0 0.000123567852641986 9.86421173215221e-05 5.53921946085219e-05 0 0 7.54556086846807e-10 0.000754598686587852 0.000113701593824448 0.000126530037929885 4.85333066467841e-10 2.18885648902388e-10 0 NM_001205898.1 CLIP3 Bos taurus CAP-GLY domain containing linker protein 3 (CLIP3), 0.0 4749 100.00 0.796128251663642 NM_015526.2 CLIP3 Homo sapiens CAP-GLY domain containing linker protein 3 (CLIP3), 0.0 4026 86.72 0.999697519661222 TCONS_00086369_5 sp|Q96DZ5|CLIP3_HUMAN CLIP3_HUMAN CAP-Gly domain-containing linker protein 3; 0.0 1109 98.17 0.998171846435101 6 coding 0 0 0 0 0.388053078510221 0.512311731554185 -0.0456278648425199 0.527023905822156 CCCCGTCGGCGTCTGGGCCTCATCCCCTTCTCTCTGTCTCCTTCTCCCCCATCACTTCTCCAGACACTGACACCCCATTACTCCAGTTTCCCCGGTTTCAGCTTTGGTCTTCAGCCCCATCCACCCGAGGATTTGCCTGAAGCCCACCCCCAACTCTGCACCTGCCCCCCGAGGGCCACCGAGGACCATGACTAAGACAGATCCTGCCCCCATGGCCCCGCCGCTCAGGGCGGAGGAAGAAGAGGAGGAGGAGGAGGATGAGCCTGTCCCGGAGCCCCCCAGCCCCACCCAGGAGCGCCGGCAGAAGCCTGTTGTGCACCCCTCGGCACCAGCCCCCCTCCCTAAGGACTACGCCTTCACCTTCTTCGACCCCAACGACCCTGCCTGCCAGGAGATTCTGTTTGACCCCCAGACCACCATCCCTGAGCTGTTCGCCATCGTGCGTCAGTGGGTGCCCCAAGTCCAACACAAGATCGACGTCATCGGCAACGAGATTCTGCGTCGAGGCTGCCATGTGAATGATCGCGATGGGCTGACCGACATGACACTGCTCCATTATGCGTGCAAGGCTGGGGCCCACGGAGTCGGGGACCCTGCGGCGGCGGTGCGCCTCTCGCAGCAGTTGCTGGCTCTGGGCGCAGACGTGACCCTGCGTAGCCGCTGGACTAACATGAACGCGCTTCACTACGCTGCCTATTTCGACGTGCCCGATCTCGTGCGTGTGCTGCTGAAGGGTGCGCGGCCCCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCCTCCAACCTGTGCCTGGGCGCGGCCAAATGTTTGCTGGAACACGGCGCCAACCCGGCGCTTCGGAACCGAAAGGGACAAGTGCCAGCAGAGGTGGTCCCAGACCCCATGGACATGTCCCTGGACAAGGCAGAGGCAGCACTGGTGGCCAAGGAGCTAAGGACGCTACTGGAGGAGGCAGTGCCACTCTCCTGCGCCCTCCCCAAGGTCACACTACCCAACTATGACAACGTCCCAGGCAATCTCATGCTCAGTGCACTGGGCCTGCGCCTGGGAGACCGCGTGCTACTGGATGGCCAGAAGACGGGCACGCTGCGGTTCTGCGGGACCACGGAGTTCGCCAGTGGCCAGTGGGTGGGCGTGGAGCTGGATGAACCCGAGGGCAAGAATGATGGCAGTGTTGGGGGCGTCCGGTATTTCATCTGCCCTCCCAAGCAGGGTCTTTTTGCCTCTGTGTCCAAGATCTCCAAGGCAGTGGACGCACCTCCTTCATCCGTCACCTCCACACCTCGGACTCCCCGAATGGACTTCTCCCGTGTCACTGGCAAGGGCCGCAGGGAACACAAAGGTAAGAAGAAGCCCTCATCATCCCCATCTCTGGGCAGCCTGCAGCAGCGCGAAGGAGCCAAGGCTGAGGTTGGAGACCAAGTCCTCGTTGCTGGCCAGAAGCAAGGGATTGTGCGCTTCTACGGAAAGACAGACTTCGCCCCAGGGTACTGGTATGGCATCGAGCTAGACCAGCCCACCGGCAAGCACGATGGCTCTGTCTTCGGTGTCCGGTACTTCACCTGCCCCCCGAAGCATGGCGTCTTTGCACCAGCATCTCGAATTCAGAGGATTGGTGGATCCACTGACCCCCCTGGGGACAATGTTGGAGCCAAAAAAGTGCATCAAGTGACAATGACGCAGCCCAAACGCACTTTTACAACAGTCCGGACCCCAAAGGACATCGCATCAGAGAACTCCATCTCCAGGTTGCTCTTCTGCTGCTGGTTTCCTTGGATGCTGAGGGCGGAGATGCAGTCTTAGAGGCTCTGGACATCCGACAGAGACACAGAGCCCCCTCTAGCATCTCCTGACACGAGGAGCCCCCAAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAATAGAGACCCCCATTAGCCAGCCCTCGATCACTGAGGCCCTATTAACAGATTCCCCCATGATGACCCCCCAAATACAGACCCTATGTTACCCAGAAAGAGATTCCCTGAGTGTAGTACCTTCAGGCTAGTCCCACCCCTCAGATCAGACCCTCCAATTAACAGATTTCCATCTCACCCCAAATGATGGTGACTTTCTCTACATGATGCTCCACAGTAGAACATTCCTGAGTCACTAGTCACTGGAGCAAAACCATTCCCTATTAACAAAGTCCCTCCCCACATCAAACCCCCTTGAAAGAAACATCTCCAGAGAAGAGTAACAGATCCACATTTACTATCAGTCCTGTCAAGATGTTGTGACTCCCATGGTCACCCCAAAATCCTTAGACTGCAATCGGACACTCTCTCCATTAACAAAAGCCTCTACTCTTACCCCTCAAGAAGAGACCCACATTAACCAGCCCACTGTCACCCCCAATTTACAGATGCCAAAACAGTCCTGGAAGTGCTAATTACAGGACCCCCAAGTCTTCCTACCCTCTGCACCCTCAAGAAACCCCCAGTGCCTTGTATGAAGCCCACCCCATGTGGCCCACAGCACCTGTGCTGGCCAGGCTCCCAGAAAATTCTCTATTTTTTAAGTAATGATTTCCCCCTTTGGGGGACCCCAAAATTTGGAGGCCCCATTCTGGGACTCAGGATCCCAACCCCCAAAGTACATGTCCCAAACTTCCCTCTGCCCCTAATACCTACAGCCCCTAGGAGAGCCCAAAACCCTAACTCCCAGGACCCCCAAATCATGGAACCCCAAATCCCCAGGGAATCCCAAATTTAAAAAATCCGATTCCAAGCCCCCAGGAATCCCCCAACCATGGAAGTCCCTATGCCTGAGATGGAGGAGACTGTAGTCAGGATATGCATCCTAGGCACCCAGGGCACGTCAAGCCCTATTCATAGGCACCAGGAGACCCCCAAACAGAAATTCTCATCCCTGGAAACCAGAGGATTTCGATGCCCCGAGTCCATGGATCACAAGATACCCAAATTCCAAGAGCCCCAGTCCCAAGGGAACCCCAAATCCTCAAGCCTCCCTCTCTAATAGACGAGGAGCATCGAGGCCTTCAGGGGATCCCAAATCCTGGAGCCCCCATTTCAATCTACGTTCTGGTCACAGGTCCAAAACGCCAAATCTAAGTTACTGGCCCTGAAGGACCTCAGAGCACCCTGGTCAGAACAGCAGAAACCGACGGAGACCCTGAAGGCCCAGGGTGTCCAGGGCAGACCTGGGGCCCTGAAAACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCCAAACTCAGCATGACCCCTATCCCCTTCAATAA EMBV3_02036 AATGGGCCTCTGTCATACGTGGAACAGGGATTTTCCATTCACACTCCAAGGACCGCTGGA Gene GeneID:511832|TMEM231:NM_001101078:97_cdna Constitutive 0 NULL GeneID:511832 18 GENE TMEM231 NULL transmembrane protein 231 EMBV3_37327 GTGTCCTCCTGCAGACTCGGCTCCCCTGACCTGCCTTCGTCACACCATTTGCTTCAGAAA Gene GeneID:513431|EXOC2:XM_002697610:103_cdna Constitutive 0 NULL GeneID:513431 23 GENE EXOC2 NULL exocyst complex component 2 EMBV3_11253 AACAAAACCTGACCGTGGATGCCTTCCTCTGAGACAGGCCCCGACAGGCTCTGGGGCCCT Gene GeneID:100335352|LOC100335352:XM_002694703:133_cdna Constitutive 0 NULL GeneID:100335352 18 GENE LOC100335352 NULL hypothetical protein LOC100335352 EMBV3_09523 GCTGCCTCACAAGGTCCTGAAAGGAAAGTTTTGTTCTAATTTAGTGATGATCTGGAGAGT Gene GeneID:281072|LYST:NM_174020:69_cdna Constitutive 0 NULL GeneID:281072 28 GENE LYST CHS1 lysosomal trafficking regulator EMBV3_23881 TCTCATCATCTCTTGCTGGATGTCTGGTTTATGTGTATTAATCCCACCACTTAGCCTGGG Gene GeneID:782220|LOC782220:XM_002687443:230_cdna Constitutive 0 NULL GeneID:782220 5 GENE LOC782220 NULL similar to olfactory receptor MOR114-8 EMBV3_30006 CCCTCCTGAGACTGAGATCCTCCTCTTCTGGGATAAAAGAGAGAGCTGCAGAAATACCAG Gene BVT0101_050470 - 1 EMBV3_28811 GK000006.2:97735629-97988423 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37580 GGTGGAAATGCGTGGCATCTACGCCAAAGTGGACCACGGGGCCCTCTCGCAGGCCCTGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40693 AAACCCTTCCACATGGGAGTAGCCCTGCTCATTCAGCCTCTTCTTGATCTTGTCCAGCCA Gene BVT0102_339218 - 1 EMBV3_22039 GK000002.2:119051471-119135909 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103493 1 XLOC_062129 NonCoding TCONS_00103493 XLOC_062129 NonCoding NonCoding - 2:119089821-119091501 - TSS76838 635 1 TCONS_00103493_3 139 0.37007874015748 3 0.623585467540202 0 1.58243025101913e-05 0 0 7.77508681416371e-06 0 0 0 0 0.00113391668966966 1.08150556028947e-05 3.37859858200736e-05 0 0.000148157508532274 0 0.000166372152726215 0 0 0 0 0 0 0.000158920438781159 0.0011352438126098 2.18219638416477e-05 0 0.000369080219566723 0 5.35153287758915e-05 0.000108883155415938 XM_005197542.1 SP140 PREDICTED: Bos taurus SP140 nuclear body protein (SP140), 0.0 1146 100.00 0.998425196850394 NM_138402.4 SP140L Homo sapiens SP140 nuclear body protein-like (SP140L), mRNA. 2e-97 360 86.18 0.477165354330709 0 noncoding GAGTTCCTCCTCTTGAAGGTCTATTGCCATTCAGAGAGCACCTTTTTTGCGAGGATTCCCTATTATTATTATATGAAAGAGGCTTCTAAAAACCTCAAGGAGCCCATGTGGCTGGACAAGATCAAGAAGAGGCTGAATGAGCAGGGCTACTCCAATGTGGAAGGGTTTGTGTGGGACATGCGTCTCATCTTTCAGAACCACAGGGCATCTTTCAAGTTCAATGATTTTGGCCAAATGGGGCTTAGACTGGAGGCAGAATTTGAGAAGAATTTCAAGGAAGTGTTTGCTCTTCAGGAAACAAATGAATAATGGAATAATGGATGTTGTTGGTGTCCTGGAAATTCCTCTTTTGGCCAAATGTCTCATTCCCCAGCTGCATGAAGGGTTGGCTGCTGATGCCACCCCTCCCCATAGCGCTGCCTTCAGCCAAGTGGAGCCAACTTCACCTGGAGGTGACACGTCCTTGGCCTGGGGGCCGGCCTCCAGTCGACCCAACCTTGATGCTCTGTGCATCCCATGGGATCAGGCTGGAGCCTGTCTGAATATCCATCCTTAGCTTTTGACCCAATACTGTCCTGCTTCCCTCATTCCTTTCTAGCAAAGAAATACAAAATAAATTACTTACGTAAGAGACT TCONS_00106380 r 5' 23270 TCONS_00106380 r 5' 23270 EMBV3_23346 GATCATGCGATTGGTGGCCGAGTGTAGCCGCTCCAGTGTTCATGCCAGTGGGCACGCAGG Variant GeneID:505497|QTRT1:XM_002688843:165_cdna 143^192 1 EMBV3_06319 GeneID:505497 7 GENE QTRT1 NULL queuine tRNA-ribosyltransferase 1 EMBV3_42822 AGGCAGTGCTCGTGACCCCGCCCCCAGCCAGGTGCCTTTTCCATTTTATTAGTTTTCTTT Gene GeneID:509819|PTDSS1:NM_001046040:24_cdna Constitutive 0 NULL GeneID:509819 14 GENE PTDSS1 MGC137520 phosphatidylserine synthase 1 EMBV3_40943 CCTTGTCTTTAGCCACCCCCATTCTGGACTTCTTTTTCCTTTTCTACCGACCTAACACTT Gene BVT0102_406995 + 1 EMBV3_33807 GK000010.2:5071629-5122851 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28122 TCAGCCAGCTGTCATCCTGCTCCACTGTCTCAGCTCCTAGACCTTCAAAACCAAAGCCTG Gene BVT0102_233477 - 1 EMBV3_40191 GK000016.2:1317591-1327007 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42329 GAGCGGACGGACGGCGCGCCCGAAATGCAGGTGAGTGAGAGGATGCTGGCGGGGGGCGCA Variant GeneID:520694|LINGO1:XM_002696672:302_cdna 483^549 3 EMBV3_29315 GeneID:520694 21 GENE LINGO1 NULL leucine rich repeat and Ig domain containing 1 EMBV3_16849 TGGTCCTCACGGGCAGCAGCGACAGCAGAGTCATCCTCTCCAACATGGTGTCCATCTCCT Gene GeneID:613935|TSSC1:XM_002689964:36_cdna Constitutive 2 NULL GeneID:613935 8 GENE TSSC1 MGC128511 tumor suppressing subtransferable candidate 1 EMBV3_26357 GCTGGGTTGACTTCCTATCCATTTGACACTCTGATATCATGTACACAGGCACGCTTGACT Variant GeneID:282479|SLC25A5:NM_174659:8_cdna 703^742 1 EMBV3_33432 GeneID:282479 X GENE SLC25A5 NULL solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 EMBV3_21287 GTAACAGTAAACGTTGGATGGTAATTCTACAAAATCCTGCCTGGGTGGGGAGCTGGGGTG Gene BVT0102_099833 + 0 NULL GK000003.2:98536868-98566748 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174188 TCONS_00174189 1 XLOC_104541 Coding TCONS_00174189 XLOC_104541 Coding Coding SLC5A9 3:98565345-98587443 = TSS129321 3821 1 TCONS_00174189_1 705 0.0772049201779639 14 0.827714169344255 0.00493291495866076 0.00218403487798225 0.00450353960274644 0.00138738710452947 0.00129233599582844 0.000620376211926672 0.000934024530435002 0.00134047346576513 0.000739247815795117 0.000138908253355384 0.000560764119964582 5.30564746194528e-05 0.00115416226422778 0.00199313831812005 0.000750686667343118 2.61807207467305e-09 0 0 0.00100449899765074 0.00214368898585173 0.000271783535673935 0 1.75914631661663e-12 0 0.00292661539977794 0.00153606732572441 0.00284294351236334 8.79824461514669e-05 0.000168915903792613 3.6189913682573e-05 XM_005204758.1 SLC5A9 PREDICTED: Bos taurus solute carrier family 5 (sodium/glucose cotransporter), member 9 (SLC5A9), transcript variant X3, mRNA. 0.0 6152 100.00 0.892436534938498 NM_001135181.1 sodium/sugar cotransporter Homo sapiens solute carrier family 5 (sodium/sugar cotransporter), 0.0 2693 78.98 0.826485213294949 TCONS_00174189_1 sp|Q2M3M2|SC5A9_HUMAN SC5A9_HUMAN Sodium/glucose cotransporter 4; 0.0 1148 85.11 0.998581560283688 1 coding 1 1 1 1 0.0187521586084414 0.90065616116003 0.0375457228378055 0.451942341093522 ATGAGCACGGAGCTGGCAGCAATGGGGCCTGGCGCTTCGGGAAGTGGGGTCAGCACTGCGACAGTTCCACGCTCAGCGCCGGGTCCCAGAGGCAGCCTGCATGCCTACGATATCGCCGTCCTGGTCGTCTACTTTGTCTTCGTCATCGGAGTAGGGGTCTGGTCATCCATTCGTGCGAGCCGAGGGACCATCGGTGGCTACTTCCTGGCGGGGAGGTCCATGAGCTGGTGGCCAATCGGAGCATCTCTGATGTCCAGCAACGTGGGCAGTGGCTTGTTCATCGGCCTGGCTGGGACAGGGGCTGCTGGAGGTCTTGCTGTGGGTGGCTTTGAGTGGAATGTAAGGAAGCTGGCTGGAAGATTCTCAGGGATAGAGGGGAACATGAATCCCTTTTCCTCCCCATTCTCCCAGGCAACCTGGCTGCTTCTGGCCCTTGGCTGGATCTTCGTCCCCGTGTACATTGCTGCCGGTGTGGTCACAATGCCGCAGTACCTGAAGAAGCGATTCGGGGGCCAGAGGATCCAGGTGTACATGTCTGTCCTTTCTCTCATCCTCTACATCTTCACCAAGATTTCAACTGACATCTTCTCTGGAGCCCTGTTCATCCAGATGGCCTTGGGCTGGAACCTTTACCTCTCCACAGTGACCCTGCTGGTGGTGACGGCCGTCTACACCATCACAGGGGGCCTCACGGCCGTGATCTACACAGATACTCTGCAGACCGTGATCATGGTCGGGGGAGCCCTCGTCCTCATGTTTCTGGGCTTTCAGGAGGTGGGCTGGTACCCAGGCCTGGAGGAGCGGTACAGGCAGGCCCTCCCTAACGTCACAGTCCCCAACACCACCTGTCACCTCCCCCGGCCCGACGCCTTCCACATGTTCCGGGACCCTGTGCGCGGGGACCTCCCCTGGCCAGGCCTCATCTTCGGGCTCACGGTGCTGGCCACCTGGTGCTGGTGCACTGACCAGGTCATTGTGCAGAGGTCTCTCTCCGCCAAGAGTCTGTCCCATGCCAAGGGGGGCTCCATTCTGGGGGGCTACCTGAAGATCCTGCCCATGTTCTTCATCGTCATGCCTGGCATGATCAGCCGGGCCCTGTACCCCGATGAGGTGGGCTGCGTGGATCCCGATGTCTGCCAAGCGATCTGTGGGGCCCGTGTGGGATGTTCTAACATTGCCTACCCCAAGCTGGTCATAGCTCTCATGCCTGTGGGTCTGCGGGGCCTGATGATCGCGGTGATCATGGCCGCCCTCATGAGCTCACTCACCTCCATCTTCAACAGCAGCAGCACCCTGTTCGCCATTGACGTGTGGCAGCGCTTCCGCAAGAACGCAACAGAACAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGTTCCTGGTCGTCATCAGCATCCTCTGGATCCCCATCATCCAAAGCTCCAACAGCGGGCAGCTCTTCGACTACATCCAGTCTGTCACCAGCTACCTGGCCCCGCCCATCACTGCCCTCTTCCTGCTGGCCATCTTCTGCAAGAGGGTCACAGAGCCTGGAGCCTTCTGGGGCCTCCTGTTTGGCCTGGTGGTGGGGCTTCTTCGCATGATCCTGGAGTTCTGCTACCCAGCCCCAGCCTGCGGGGAGGAGGACCGCAGGCCGGCCGTGCTCAAGGACTTCCACTACCTCTACTTTGCACTCCTCCTCTGTGGGCTCACCACCATCGTCATCGTCGCTGTCAGCCTCTGCACAGCTCCCATCCCTGAGGAAAAGCTGGCTCGTCTGACTTGGTGGACGCGGCATCACCCTCTCTCTGAGCTGGAGAAGGAGCCCCCTGAGAGTACAGCGGGGACAGCGGAGGTGGCCTCTGGGGAGGGCCCCACAGGGGCCAGAGGAGCAGAAGACCCCGGCCAGGGCCAGGAGCAGCCTGGAGCCCCACGCAGGTCCTGGGGACAGTGGCTCTGGCGGTGGCTCTGCGGACTCTCGGGAGCCCCGGAGCAAGCGCTGAGCCCTGTCGAGAAGGCTGCCCTGGAACAGAAACTGACCAGTATCGCGGAGGAGCCGCTCTGGAGGAGCGTCTGCAACATTAACGCTGTGCTGCTGCTGGCCGTCAATGTCTTCCTTTGGGGCTATTTTGCATGACTCCGCAGGCCTGGCTTTGGCCCAGGCAGGTTCAGCACTGCCAGGCTTGGCCGGCTGCAGACAGGCTTTCCTCCAGCCTCGCTGTCCACACGGAACCCTGAGATTGAGACTGCGGGGGGCCCTGACAAGTACCCCGGCCAGGCTGCACACTGAGGAGAGGAGCCAGGAGGCCCAGAGAGGGCGCTTGGTCTGCTCAGGACACACAGCAGGCCTTGCACTGGGTCTCGGGCTCCAGCTCTCTCCACCTCAGAACCTTTCACTCCTACCTCAGAAACAGTTTTCCCTCCTCTGGTGAGTCTGTTCAGGAGCTTTTACTCTACATGTGTCATGAGTGGCAAGAAAGTTGCAAAAATCCTCCCATGTCTTTGCTCGCCCTTATTCTTTCCTTGTCCACCATCTCCCCCCTTTACCCTCTGTCTCCCAATCCCCGCTCATCCATTTCCAGCCGGAACCTCCCCAGGGCTTTATACTCTCATTGGCAGCTCTGCAGTGGTGGCTGTCAGACTGGAAGGAGGGACGGACCAGGTGGAGGGTAAGCAAGGTGGCAGCTGGCATTGGGGCAGGGAGCTCTTCTTGGTACACTCAGATCTCCCAGCTTCCTACACTCAGATGTCCCAGCTTCCTACTCTCACATCCAAACATGCACCAAGTCTCCAGCCCTTGAGGGACTTGGAGGCCAGCTGGAGAGAAAGGGCTTGTTGGGGACAAGAGAGATGAAGACCGGCTGCTTGGTGCTATGAGTAAGCCTGGCAGAGGGGCAGCGAAGACTACCTAGGAGCCCCTGCAGCTGTGCCTCTGCCCTCTCCCTCTGCCTGCCAGGCATCCAGCTACCCTGGAAAAAACCACGACCTTGCCTGGATGTCCCTCCTCCAGGAAGCTGCCTGATGCCCACAAATGGATCAAAGTCCCATTCCTGCTCCCACACCCGCTGGACCTGCTTCTGTGACAGTGCTGATCACAGGACTGTGAGATTTGGCTCCCAGACCAGACAGCACTCCAAGGGGGCAGGGTCCAAGTGACTTTGTACCCAGAAAGTAACAGGCGTTGCATTAGTAACAGTAAACGTTGGATGGTAATTCTACAAAATCCTGCCTGGGTGGGGAGCTGGGGGTGGCGAAGAATCTATTTCAGTTGGAGTTTACACTGAGTCTCAGATGTCTAGAATGAAACCACGGCCCTGTCCCATTGCCAGAGACACCCATGAGAATGTCCCTTCCTTCTTTTGTCTTTGTCCAGGCTGTCCCTACTCTCATGGGATACATTTTAATGCTGACTTTGATCATCACTTTATGTTAATCACTCATCATAATTGAATACAAATAAAATTATTGTTTTGAGGGCTTCAATACATCTGTGTATATGAATACCTCTTGTAGCTGCTGCCTCTACATTTCTGTGCCCCTCAACCTTTTCCCATTCTGTGTCACCTCCCATGTCTATGCTATCCTTACTGATCATCAGGACCCTTTCTGGGCACTCAGCTGTTTCCCCCAATTTCCCTCAAACCGTCTACATAAGGCATTTATGTGCAACCGATTATATTGAAGGTTTGGGGAGGGGAAGAGCTGTAAGCTACAGAAGCACAATTTAAAATTAAATATTGAACATCTCCATTTCTCAGAGCTCTTCAGCCTGCTCTGAGGACTTCCCATGGATCTCGCCAAGTCCAGCCTCCTGCTACTTGCTGTGGCCCCCAGCTCCCT EMBV3_25869 CTGCAGGCGTGGAAGAAAAAACTGAGGCTGCAGAAGTTCAACTGACTCCAACTGGGTATC Gene BVV0102_164286 + 1 EMBV3_01939 GK000007.2:39337799-39351902 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212857 1 XLOC_130272 Coding TCONS_00212857 XLOC_130272 Coding Coding FAF2 7:39268332-39340178 j TSS159595 2233 1 TCONS_00212857_3 445 12 0.969086227294871 0.000207446260079597 0.000188369250996061 8.63508697028125e-05 0.000152661601015313 0.000385969713353924 7.30557441811854e-10 0.000219884497832298 0.000107896932112892 1.09582223645903e-05 8.17851000845443e-05 0.000162863486750508 0.000264343056559109 6.7216946176516e-06 1.65539446721019e-05 8.68593371590761e-10 0.00329061298507687 0.00338682010498934 0.00395144700985531 8.85360220121068e-05 0.000405648635907629 3.42794557843554e-10 0.00144046874014846 0.002062949748386 0.00251961393055166 0.000220801018264807 2.1066342551879e-09 4.24643395510494e-05 0.000536608506301704 0.000712441105798694 0.00144815977791597 NM_001077020.1 FAF2 Bos taurus Fas associated factor family member 2 (FAF2), mRNA. 0.0 2773 100.00 0.687863860277653 NM_014613.2 FAF2 Homo sapiens Fas associated factor family member 2 (FAF2), mRNA. 0.0 2343 92.77 0.700850873264666 TCONS_00212857_3 sp|Q2HJD0|FAF2_BOVIN FAF2_BOVIN FAS-associated factor 2; 0.0 916 100.00 0.997752808988764 2 coding GGTGCGGACGGGTCAGAAGCGTAGAGGCGGCGGCAAAATGGCGGCGCCTGAGGAGCGGGATCTAACCCAGGAGCAGACAGAGAAGCTGCTGCAGTTTCAGGATCTGACTGGCATAGAATCTATGGATCAATGTCGCCATACCTTGGAACAGCATAACTGGAACATAGAGGCTGCTGTACAGGACAGATTGAACGAGCAAGAGGGTGTACCAAGTGTTTTCAACCCACCACCATCTCGACCCTTGCAAGTTAATACAGCTGACCACAGGATCTACAGCTATGTTGTCTCAAGACCACAACCAAGGGGGCTGCTTGGATGGGGTTATTACTTGATAATGCTTCCATTCCGGTTTACCTATTACACAATACTTGATATATTTAGGTTTGCTCTTCGTTTTATACGGCCTGACCCTCGCAACCGGGTCACTGATCCCGTTGGGGACATTGTTTCATTTATGCACTCTTTTGAAGAGAAATATGGGAGGGCACACCCTGTCTTCTACCTGGGAACATACAGCCAGGCACTTAATGATGCCAAACGGGAGCTTCGCTTTCTTTTGGTTTATCTTCATGGAGACGATCACCAGGACTCGGATGAATTCTGTCGCAACACACTCTGTGCACCTGAAGTTATTTCACTAATAAACACTAGGATGCTCTTCTGGGCATGCTCCACAAACAAACCTGAGGGATACAGAGTCTCTCAGGCTTTAAGAGAAAACACCTATCCATTCCTGGCCATGATTATGTTGAAGGATCGGAGGATGACTGTGGTAGGACGTCTAGAAGGCCTCATTCAGCCTGATGACCTCATTAACCAGCTGACATTTATCATGGATGCAAATCAGACTTACCTGGTGTCTGAACGCCTAGAGAGGGAAGAACGAAACCAGACCCAGGTGCTGAGACAGCAGCAGGATGAGGCCTACCTGGCCTCTCTCAGAGCTGACCAGGAGAAAGAGAGAAAGAAGCGAGAGGAGCGCGAACGGAAGAGGCGGAAGGAGGAGGAGGTGCAGCAGCAGAAGCTGGCAGAGGAGAGGCGGCGGCGGAATTTACAAGAGGAGAAGGAAAGGAAGTTGGAGTGCCTGCCCCCAGAGCCTTCCCCTGATGACCCTGAAAGTGTCAAAATCATTTTCAAATTACCCAATGATTCTCGAGTAGAGAGACGATTCCACTTTTCACAGTCTCTAACAGTAATCCACGACTTCTTATTCTCCTTGAAAGAAAGCCCTGAAAAGTTTCAGATCGAAGCCAATTTTCCCCGAAGGGTGCTGCCCTGCCTCCCTTCAGAGGAGTGGCCCAACCCCCCAACGCTGCAGGAGGCCGGACTCAGCCACACAGAAGTTCTCTTTGTTCAGGACCTAACAGACGAATGACACTTTTTCTTCCTCTTCTCTCCCACCCCAATCCCCAAAAGAAATGGAAAAAAAACAAAAACAAAAAAATAAGAGAGATTGATATTATTATTATTATAATACAATATTTTTTTTAAAGACTGCTGCATCCTAAGGAAGGATCAGAAACCATGCTGCCTGCAAGAGTCACCACCTGTGTGTGCACGCAAGGTCATCAGCTAAACAGAAACACTTGTTTCCGGTTTTGTTCTGCACTTCCAAGCCTGAAGTTGTAGATTCGGCTGAATTTCCATAGGAAGTGACCAAGCAAAGATACCCAGTTGGAGTCAGTTGAATTTCTGCAGCCTCAGTTTTTTCTTCCACGCCTGCAGAATTTCCTGCAGCAAGTACTTCTTTCTCCTTGCTTTCACTATAATGTTTGGACAAAAAATGGCCAATGGAGAATACTTCTTTAAAAAAGAAAAACAAACTATAAACAAGCTAAAAAGAACCTAGAATCTTCAACTGAACAGTCATTATGAAAATTGCAAATGGTGCCAAGGCCAAGGAAAAAGTTACGGAAAATGACTATGGGAAGGAGTGATAACCCCCAGAATGCAATGATAACCCCCAGAACGCAAAGTCAGGGGAGTATTAATCTGGTGCTTGAAGAAGGAGCTCCACTTTAGAACTGGTTCTGTTTGTTTGTTTGTTTTTTTAAGGACTTGCGAGAGACGCAGCAACAAGAAATCCATCCACAAAGGATGCAGTGCCCCAACGTGTACTGCACCTGAATAAGTTACGTGATAATTTACTGAGGAAATCTAGTGTACTTTAAATTTTTTTCATAAAAGTTTACATTGTATTGTAGGTTAACATTAAATGTTTTATAACAAAATA EMBV3_17062 GAATTTCCACTCCCTGACCGCCGCCAGAAGAGACTGATTTTCTCTACTATCACCAGCAAG Gene GeneID:510029|PSMC4:NM_001035083:583_cdna Constitutive 1 NULL GeneID:510029 18 GENE PSMC4 MGC127979 proteasome (prosome, macropain) 26S subunit, ATPase, 4 EMBV3_08404 CAGCTTCAGGAGGAAGCCCACCTCAACACCTCCTTTAAGCACTTTATTTTCTTCGTTCAG Gene GeneID:614611|MOBKL1B:NM_001076338:60_cdna UTR3_Alt 2 NULL GeneID:614611 11 GENE MOBKL1B MGC142481 MOB1, Mps One Binder kinase activator-like 1B (yeast) EMBV3_06388 CTATCTCTTCATCCATAAACTGGGGGAGGGAGAGGTACGCTGTGGAATGAGATAGAAAAG Variant GeneID:521237|STK16:NM_001046255:89_cdna 236^455 2 EMBV3_31677 GeneID:521237 2 GENE STK16 MGC137500 serine/threonine kinase 16 EMBV3_43424 GGAGTCCACGGTTCAGACTATCCTTGTTTTCCAATTGCCTCTCTGCAGCCATCACATGGT Gene GeneID:520002|LOC520002:XM_002697416:121_cdna Constitutive 0 NULL GeneID:520002 23 GENE LOC520002 NULL similar to olfactory receptor Olr1750 EMBV3_34260 AGCAAGTCACCGAAGGACCATGTCTGATGGAAGCTCTTTGCCCGTTGGTGCAGCTCTCAT Gene GeneID:616014|LOC616014:XM_002698791:158_cdna Constitutive 0 NULL GeneID:616014 28 GENE LOC616014 NULL similar to mixed lineage kinase 4 EMBV3_40219 GGCTGCAGTCCTTGTTCGTGGAGCTGAAGGGCAAAGAGGAAAGATGACACACTTCCAATC Gene BVT0102_377691 + 1 EMBV3_37758 GK000005.2:27115820-27171924 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22569 ACAAAGGAGCCTTGTTGATGTCTTTGGTGTGTGACGGAGGGGGGTGTCAGTGCCTAGAAA Gene GeneID:505332|PISD:NM_001024475:50_cdna Constitutive 1 NULL GeneID:505332 17 GENE PISD MGC179415 phosphatidylserine decarboxylase EMBV3_18174 CCTCTCCATGTCACCTGCATAAAGTCCCTCCACTAACCCCACATTTGCCCTTCTTTTTGC Gene BVT0102_165640 - 1 EMBV3_38697 GK000002.2:126622544-126676549 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23085 ACCCTCCACAATGAGAGGAAAGCCCATGCAGCAACGAAGACCCAGCACAGCCAAAAAGAA Gene BVT0102_162096 + 1 EMBV3_05507 GK000020.2:31128612-31171387 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114896 TCONS_00114899 TCONS_00114897 TCONS_00114900 TCONS_00114898 1 XLOC_069390 Coding TCONS_00114898 XLOC_069390 Coding Coding NNT 20:31169959-31262611 j TSS85581 5227 1 TCONS_00114898_3 1086 0.0616032140807346 22 0.943821437437265 3.95433098916441e-09 0.000299166279411414 0.000237582720218238 2.88159919232731e-09 0.000187525184010568 9.89259334939465e-05 0.000214226942603289 0.000387927834848344 0.000826931699249609 2.64018972063312e-05 6.57623966970519e-18 1.04997324477517e-13 8.56577279874691e-12 2.39476643535997e-05 5.37505152136472e-05 0.000117748304481449 0.000803087102554041 0.000444412676993685 3.61670872443699e-10 0.000253723064381553 2.22879820330223e-11 4.66459946545296e-05 0.00018093348916575 0.000262444512523397 2.56748081407774e-07 5.95106657173967e-05 0.000242925098138157 3.67040654001835e-22 2.00172561393813e-38 0.000118473212660484 XM_005221529.1 NNT PREDICTED: Bos taurus nicotinamide nucleotide transhydrogenase (NNT), transcript variant X2, mRNA. 0.0 8089 100.00 0.857853453223646 XM_005248274.1 NNT PREDICTED: Homo sapiens nicotinamide nucleotide transhydrogenase (NNT), transcript variant X1, mRNA. 0.0 5662 88.12 0.854218480964224 TCONS_00114898_3 sp|P11024|NNTM_BOVIN NNTM_BOVIN NAD(P) transhydrogenase, mitochondrial; 0.0 2202 100.00 0.999079189686924 4 coding 1 1 1 1 -1.06909525056134 0.0578266310222079 0.0235810068559818 0.745006292154152 CGCACGGAGGCGGGGCCGAGGAGCAGCAGGTCGAGCCCGAGACAAAGAGGGTTTTGGCAGCCCCGGGAGAAGAAGCAAGGGTTCCTTGGGTGATTTACCTTTAAGGACATTGGGGATCCAGAAAATCGGGAACTTCTGTGAACATGGCGAACCTACTGAAAACAGTGGTGACTGGTTGTTCATGCCCTTTCCTCAGCAATTTGGGGTCCTGTAAGGTTCTACCAGGGAAGAAGAATTTTTTACGAACATTTCATACTCATCGGATACTGTGGTGTAGTGCCCCTGTAAAACCAGGAATTCCATACAAGCAACTAACTGTTGGGGTCCCCAAAGAGATTTTCCAAAATGAGAAGCGAGTGGCATTGTCTCCTGCTGGCGTTCAGGCCTTGGTCAAGCAGGGGTTTAATGTTGTTGTGGAATCTGGCGCAGGTGAAGCTTCCAAGTTCTCAGATGATCACTACAGAGCAGCAGGTGCCCAGATCCAAGGGGCGAAGGAAGTGCTGGCTTCTGATTTGGTGGTCAAAGTGCGAGCCCCTATGCTTAACCCAACATTAGGTGTTCATGAAGCTGATCTTTTAAAGACATCGGGTACACTGATCAGTTTTATTTACCCAGCCCAAAATCCAGACTTGCTAAATAAACTGTCCAAAAGGAAGACGACAGTTCTGGCAATGGACCAGGTTCCAAGAGTCACAATTGCTCAGGGATATGATGCGCTAAGCTCCATGGCCAACATTGCCGGTTACAAGGCTGTTGTACTAGCAGCAAATCATTTTGGACGGTTTTTTACTGGTCAGATCACAGCTGCTGGAAAAGTTCCTCCAGCTAAGATTCTGATAGTTGGTGGTGGCGTTGCTGGGCTGGCTTCTGCAGGTGCAGCCAAGTCCATGGGTGCCATTGTTAGGGGATTTGATACAAGGGCCGCAGCTTTGGAGCAGTTTAAGTCTTTGGGTGCTGAGCCCTTGGAGGTGGATTTGAAGGAATCTGGTGAGGGACAAGGAGGATACGCAAAGGAGATGTCCAAAGAGTTCATTGAGGCCGAAATGAAGCTCTTTGCTCAACAGTGTAAGGAGGTGGACATCCTTATCAGCACAGCTCTTATTCCAGGTAAAAAAGCTCCCATTTTGTTTAATAAAGAAATGATTGAGTCCATGAAGGAAGGTTCAGTTGTTGTGGATTTAGCTGCTGAGGCTGGCGGAAATTTTGAAACTACCAAGCCAGGAGAACTTTATGTTCATAAGGGAATTACTCACATAGGCTACACAGACCTTCCCAGCCGAATGGCCACTCAGGCCAGCACCCTGTATTCCAACAACATCACCAAGCTTCTGAAGGCCATCAGCCCAGACAAAGATAATTTTTACTTTGAAGTGAAAGATGACTTTGACTTTGGTACAATGGGTCACGTCATTAGAGGAACCGTAGTGATGAAGGATGGCCAAGTGATTTTCCCTGCTCCCACACCGAAAAATATTCCTCAAGGTGCCCCAGTAAAACAGAAGACAGTGGCAGAGCTGGAGGCTGAAAAAGCAGCTACTATCACGCCCTTCAGGAAGACGATGACATCGGCTTCTGTCTATACAGCAGGTCTCACTGGGATACTAGGTTTGGGCATCGCGGCTCCCAATTTAGCCTTTTCCCAGATGGTGACCACCTTCGGCTTGGCTGGCATTGTGGGCTACCATACTGTCTGGGGAGTGACTCCTGCTCTCCACTCACCGCTAATGTCTGTGACTAATGCAATCTCAGGGTTGACTGCAGTCGGTGGGTTGGTGCTGATGGGAGGACACTTGTATCCTTCCACAACTTCTCAGGGCCTTGCTGCTCTTGCCACGTTCATATCCTCAGTCAACATTGCAGGTGGCTTTCTGGTGACTCAGAGAATGCTGGACATGTTCAAGCGTCCCACTGACCCTCCGGAGTATAATTACCTGTATCTGCTTCCTGCTGGTACCTTTGTTGGGGGATATTTAGCCTCCCTCTACAGTGGTTATAACATTGAACAGATTATGTACCTGGGCTCCGGTCTTTGCTGTGTTGGTGCCCTGGCCGGGCTTTCCACCCAGGGGACTGCACGTCTTGGCAATGCCCTGGGCATGATTGGGGTGGCTGGAGGCTTGGCAGCCACCCTCGGAGGCCTAAAACCATGTCCAGAATTGTTAGCTCAGATGTCTGGAGCAATGGCTTTGGGCGGTACCATTGGATTGACAATTGCGAAACGCATCCAGATTTCGGATTTACCTCAGTTAGTTGCTGCTTTCCACAGTTTAGTGGGATTGGCAGCTGTGCTTACGTGCATAGCTGAGTACATCATAGAATATCCACATTTCGCTACGGATGCAGCAGCCAACCTTACCAAGATCGTGGCCTACCTCGGTACTTACATTGGTGGGGTGACCTTCAGTGGGTCTCTGGTTGCCTATGGAAAATTGCAGGGAATCCTGAAGTCCGCCCCTCTCCTGCTCCCTGGGAGGCACCTCCTCAATGCAGGCCTGCTGGCTGGTAGCGTGGGTGGGATCATCCCCTTCATGATGGACCCCAGCTTCACCACTGGCATCACCTGTCTGGGCTCTGTGTCAGCCCTCTCTGCTGTCATGGGTGTGACTCTGACGGCTGCCATTGGGGGTGCCGACATGCCGGTGGTCATCACTGTGCTGAACAGCTACTCAGGCTGGGCCCTGTGTGCAGAGGGTTTCCTGCTCAACAACAATCTGCTGACCATTGTGGGTGCGCTTATTGGCTCCTCGGGCGCAATCCTGTCCTACATCATGTGTGTGGCAATGAATCGCTCCCTGGCTAATGTGATTCTTGGAGGCTATGGTACCACTTCAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCACGCATACAGAAATCAACCTTGACAATGCAATTGACATGATTCGAGAAGCTAATAGCATTATTATTACTCCAGGCTACGGGCTCTGTGCAGCCAAAGCTCAGTACCCCATTGCTGATTTGGTGAAGATGCTCTCTGAACAAGGCAAAAAAGTCAGGTTTGGAATTCACCCAGTTGCAGGCCGGATGCCTGGTCAGCTTAATGTGCTGCTGGCTGAGGCTGGGGTGCCATATGATATTGTGTTGGAAATGGACGAGATCAATCATGATTTCCCAGACACTGATTTGGTCCTTGTAATTGGAGCTAATGACACTGTTAATTCAGCAGCTCAAGAAGACCCCAACTCCATCATTGCAGGCATGCCAGTCCTTGAAGTCTGGAAATCAAAGCAGGTCATTGTTATGAAGAGGTCCCTAGGTGTTGGCTATGCTGCAGTGGACAATCCAATCTTCTACAAACCGAACACAGCCATGCTTCTAGGCGATGCCAAGAAGACGTGTGATGCTCTGCAGGCGAAAGTTAGAGAATCCTACCAGAAGTAAAATATGAAGATCAAACCACTTCTTCACTTGCGGGAACAGGCAAATAAATTATTAACGTATACAGCTGATACACATCTGTAGCAAAACTCTTGGAAGAAAAGGAAGACTCTGAAGAAACAAAGCCAATAAAGGGAAAATTTTCAAGAGCTGCGATCCATCGATTTTAAAAAAGGATTGATAATTCTAAATGTCTTTCTGTGCATATTTTTTTGTTATGAATTCTAAAAGTATTTTACAAAAGGAGAAAAAACAGTCTCATTTTAGGTATATTCCATTTGGATTTTCCTCAATAGTCAGCAATGTTTTAAGAAATTAAGTCTATGATTTTGGGGACTTACATTATACATGGATTTGAAAAAATCTGACACAGTGTAAACATTACAGCCACCTGAATTTATGTTTTTTTCACCAAATGTGACTAATTTGAAACTTTTATCAACTCTTGAGCTGTCTTCTTAACCATTTAACCATAATCTGAAATAAGCGTATCAAATTGGTTTCAGTTTTTCAAACTGTACTTTAAAGTCTGTATTTCAAGGGTATATTTTCTCACTTCTATTTCAATACATTAAAGGACTAGATAATCTTTCAGAGATGCTGGAAGCAAATCATTTGCTTTGTATGTTTCATTAGAACACCAATGAAACATGTAACTTGAAATCAGTATTAGCTGTATTTTTTAAACCCCATTTCCAATTGGAGATCTCTTTTAATTTCAGTTTATATGTGTAGTACTGTATTAAGTGCACTTGAATGAAATTCTACTATTTGCCTAATAAAATGAGTTCATCATGTTTGCATAATGATGTAGCAGTTGTCTCTGGTGACAAAAGGCTAAAATCAAATAATTCTGCCTGTTAACAGCTGAGGAAGGAATTGCTATCATGAAATAGATGAGATTAAATTGTCTTACCTGTTTGGAAGAATGACTTTTTCCCTAAATCATTGTGTATTTTAAGGTGTTATGTAAATGATAACGTTTGAGAGAAATGGTGGCATTTTTCTAGCTACCTCTTTGTTTAAGCAGCAGTACAGATTCTGCCTTTTTAGCACCAGTAAAGATTGTCCTTTTGCAGTAAAAGTGTAATTTTCTTTGTGTCTTTGCTAGTGTGCCAAAAGTTCTATATAGGTTGAATGTGTGGTGAATATTCGGAATGCCTGTTTCTCTATATAGTTAATTTGGCATTGAGTTTCTTTCTTTTCCCTTCTTTTTGGCTGTGCTGGGTCTTCGTTGCTGCATGGGCTTTCCTCTCATTGTGGAGGGTGGTGACTGCTCTCTAGTTGCCGTGTGCGGCCTTCCCACTGTGGTGGCTTCTCTTGCTGCGTTGACCATGGGCTGTAGGACACCCAGGCTTCAGCAGGCTTCTATGTCGTGTGGGCTCGGTAGTTGCGGCTCCTGGGCTCTAGAGCCCAGGCTCAACAGTTGTACCACATGGGCTTAGTTACTCCACAGCATGTGGGATCGTCCCGAACCAGGGGTCAAACTCGTGTCTTCTGCATTTTTACCACTGAGCCACTAGGGAAGTCCGAGCATTGTTTCTTGAGACAGTTATTAACATGTAAACACTATCTGTAAATCATAAAAAGAAATAACTGGTGTGAAATTTTTTTACTATAATGCTCATGTTTATTGAATTTATAACTCAGTATTGGTTTGATCATCAGTTTCTATTTTGCTGTGCCTGAGATTAAGATCTGCATGTGTGTGCATGTGTTTAAATCAGGAAAGACTCCTTTTTAAGTGGTAAATGCAATTTGTTAATGGATCTCAGATCATTTGTAACTTCATGAGTGATTTATACAAAGAAAGTTCTATTTGAAGA EMBV3_23947 CTGCATTGACAGGCAGGTTCTTTCCCACTGGCACCACCTAGTAAACACTCTCACGGTCTT Gene BVV0102_088542 + 0 NULL GK000013.2:56155350-56874285 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36350 ACTCCAGTCAAGTCTTCCCCAGAAACCCTGATGAAAATGAGGGGTGAGACAGAGGGTCCA Gene GeneID:100296331|LOC100296331:XM_002688545:162_cdna Constitutive 1 NULL GeneID:100296331 7 GENE LOC100296331 NULL similar to nuclear receptor subfamily 2, group F, member 6 EMBV3_21638 CTCGAGGGAGGAATGTTTAAGGGAGGTAAGATGAGCTTCTCAGCAGGGGAAAGCAAGTGC Gene GeneID:539935|GJB3:NM_001104995:260_cdna Constitutive 0 NULL GeneID:539935 3 GENE GJB3 MGC155132 gap junction protein, beta 3, 31kDa EMBV3_19049 AGTTCTGGGAGCACCACATGGACTCGAACGTGCTATTCCTCAAGTACGAAGACATGCACC Gene GeneID:618738|SULT4A1:NM_001076518:216_cdna UTR3_Alt 2 NULL GeneID:618738 5 GENE SULT4A1 NULL sulfotransferase family 4A, member 1 EMBV3_22660 GGGTTTCCGTCCCTGTGGTTGTATGGCTTGAAATAGTTTTCATTGCTTTGAATATGTCTG Gene BVV0102_005194 + 0 NULL GK000017.2:18516482-18553783 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074994 TCONS_00076773 TCONS_00074997 TCONS_00076774 TCONS_00074996 2 XLOC_046471 XLOC_046911 Coding TCONS_00076774 XLOC_046911 NonCoding NonCoding - 17:18516637-18524512 - TSS57567 4606 2 TCONS_00076774_2 100 0.0182370820668693 2 0.415290830581661 0 0 4.8527159942567e-05 0 1.40346306703447e-09 0 1.62282564877915e-09 1.28413354130395e-06 2.08573292696351e-09 7.26121745890642e-05 5.03621581652113e-10 0.000154464268040448 1.94499082156645e-05 0.000196512781383104 4.82744422250339e-55 0.00514451445016205 4.63353528279982e-106 2.20654429693348e-18 0 0 0 0.000918241035572063 0.000264161809773909 0.000494208498894512 9.67480227161754e-68 3.85659261923833e-16 7.19185260579766e-10 0.000131115901646336 1.15495503123218e-15 9.77439793060867e-05 XM_005192644.1 SETD7 PREDICTED: Bos taurus SET domain containing (lysine methyltransferase) 7 (SETD7), transcript variant X1, mRNA. 0.0 7898 100.00 0.95049934867564 NM_030648.2 SETD7 Homo sapiens SET domain containing (lysine methyltransferase) 7 (SETD7), mRNA. 0.0 2370 81.43 0.538211029092488 0 noncoding 1 0 1 1 -0.247065164484368 0.0716069579066255 -0.00925592766730338 0.8760324801098 CAGGGGAGGTCATGGAGGCTGGAGTACTGCCTAAAAAAAAAGGCCACCATGCCTGGGAGCCCCATAGGGCCCCAACTTGGTTTCACTATTACATGAATTGGACCAAGTAGGGCCTGGGGCCTGGGACATCAGTTCATCGGTGGGCTAAGTAAGTGATCAAGGGGATAGAAGCTGGCTTTACCCTGTGGAGAGCATGAAGTGAAGGGCAGATGGAGAGAGGAGCTCCCGATAAAAAGAGAACACAGAAAACGCAGGAGAAAAAACTCTTGAAGTAGGGAGCTCGGAACCATGAACCCAACTCTCTTCTATGATAAGCAGACACGACGTAGTCCCTGTAGCTTCCCAATGCATGAATCGAGATGAGTGACAGTCATCCAAAATGTAACCAAGTTGTATATTAAGATACATCAGTACGTGTGTACATATTGCTAGTATACACAGTGAAAATCTGTCATCATATTTATCATTTCATTTCATCCAGGACCAAAGTGGAAAAAAACAAAACCCACTCAAGTTGACTATCATTATAAAGGAGTGTTCTAGTAAGAGTCAGGGCAGTTGGGAGGTATGTCCTAGGGAGGTGACTGGTCTTGATGTTAAAACGACTTCTAACAACGGTGTGTCAAGTCACAGACAGAGGAAGCAATGATCTGCGTTATCCAAGGATGTCTCTCTCTGGTGGAAAGTTCGGTGCTTGGGTGCATAGTTGCCCAGAGCTGAGACAGGAAGTGGACTGTGCTGAGAAATGGGCCCTGCCTTGCCAGCAGGACCCTCCTCCATCCTCTCTCGAGGTGAAGGCCTGGAGGCAGGGACTGCTGGCAAAACCGAAGAAGCCCCACCCGGGGGATCTGAACCCCAACTCCACTCAGGGCAGCCTCCCTGACGTGTGTGACTAGGCAGTAAGGGTGACGGTGGATGGCGGCCAGAAAACCCGTTCCAAGGTTCCCACGGCCACGCCTGGCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGTCTCTAATGCCTCTGAGTCACTCCCGGCCCCTGAAGGCCTGGAGTGATGTCACTGAAGGGTGGACACAACTCCACGAGCACCTAACTTCCACCAGGAAGCGGCTGAGGCACTGGGAAGCCTACAAGCTGTCTCCACGTCGGGGGCAACAACGCGGGGAAGTTGCCACGCGGCAGAGTTATTTGTAGGCTTTTGATTCTTTAAAAATCAAAATTGATCTGCATTATATCTCAATAGACTCAGAGAATTCTCACCAAAAATTTTTGCAATTTGTTTAAATAGCACTGGAATAATTCAACTTCATTTAAATATATTCATTCTACCATGAAAATAGTTCATACAAACATCTATTTACATACAAACACATTAAAATTTGTGAAAAGGGTTTCCGTCCCTGTGGTTGTATGGCTTGAAATAGTTTTCATTGCTTTGAATATGTCTGCACACATTTGGCAAAATAAAACCTTAACAATTTAGTATTTTTTAAATAAAAATAGACACCGAAGTTCCAAATTCCTGAAAAAACAGAAAAAAAAAAAAAAAAAACTATCAAGGTACCTCAAGTAGATGTAAAAATTTCATATATTTTGTGAACCTTTGATCTGCGGCAAATAAACATTACCACTATCAGTCTTGCAACATAGTTTTGCTTGTTTTTCTAAAACAGAAGATGTCTGGATTCTAAATCACTACTCTTAAGACAGAAACTTGAGGCAATTGTTTTAAAACAAAGCACAACAGAAAAACGATACCTTCCTGGAATATCTTAAATGCAGTTTGCAGTGAGTGATTTAGAATTTCATAGATTAAAGGAAAATTACTAAAGTGCCACATACGACTCACGGAGAAGACAACCCTTGAACTCACTGTTCACAGTTACTGCAATTTTATGGTTACAACTAAATATCATCAATGGTTACACTTGGCCTTCACACTGGCCTTTTTCAGGTTGTTGGTGATGAGGAAACTGTTTTTCAAGTGTGAAGAACCCCCAGAGGGCAGATAAGTTTAAAGACAGCCTCAGACAGGTTCAAAGGGCTCTTCAACAACAAATTTTCTTCTCAGTGTCTCAGGCAGACCAGGGATGAAGCAGGTTAAAATAAGAATAGGTACTGCAAAACTCAAGTCTTCCATGTCAGTTGCTTTTTAATCTCATCATTCCTTTTTCAGAAATTCAATCCTTACGTTTGTTTTTTTCTGAGTCCGTTCAAATGCCCGTTTGGGGACATACTCCTACAGATTAGTTCCTATTCCTAACTCTAACACAAGATAATATTTTGTCATAGAAAAGCTGCTAAGGAAAAATCTAGTCATGCAGGAGTTGGACTGAGATGGCTCTGATTGAATCTCCTGGGGACCATGGCATCACATACCCATCTCAGCACTGGCCTTTTCTGGGGAGCCAGAAAGTTACTCCTGTATCCCCACTACACGGATTCTTCCACATTTCTGTGCTGTTGCTCATGAAACTACCTGCTTCCTGACACAGCTCCTTCCACAGCGGATATCAAGACTCAGTAGAAAAATACATCCCTCAGCTTTGGCTCAAACAGGGAAAAAACACCCTTATTCCCTCAGCAGTTCATTCCTCAGGGGACCCCGACCCCCTTGGCGGTTTTGTCTACCTACAGAACACAGTGAATCTTAAGGCGCCCTCTAACCCCACCCTGTGATGAAGTCTTACATTTAGGAGTGTCGGGGGAGGGCAGGGGATAGGAGGAGCGGTAGATTCAGACATGGATGCAGAGTGATGGAGAGAGGTACTCCTGGAGGGAAAGACAGACAGGGCCCCAGGGGAGCACACAGAGGGAGCGGGAGCCGGGGATCAGCTGGTGGGAAGGGGGGATCAGCTGGTGGGAGGGGGGGATCAGCTGGTAGGTTGCTATGTAGGCACACTGGGGCATTCTCACAGATGACAGAGAGAGAGAAGAAAGCAGAGGGCATGAGAAAGAAGAGCCCGGAGATGCAGAGAGGCTCGGGTTGCGGGCACTGCCTCCTCTGATGTGTCTGACTGTCACAGACACACTGCCAGGCTCTGAACTCAAAGTGTTGTCATTCACGATGTCATCTGAAAAATGGATTTGTGCTGGTTAATCACTACTATTTAATTCACTTCGATCGCTTTTATCAAAAGAAAAGAGAAATTCCATTTGAACTGGGTAGCCCATTGGTATAGAAATGACACCCCAGGGCAGCCTGAAGTCCTTGCTGTGGGGTTCTGTGCCAGTCTTCCCCCTGACCTCACTCCCAACGCCACCGACCAGGGTTAGTTCAAGCCATCTTTCTCTGGAGACAGTCACTCACTTTGGGACACGTTTGAAGGAAAGCACCTGTCGGAATACAAGTCCCAAGACTCCGTCGTCTGTCACAGTTCACTGAACGGTCTCTTTCTACAGAATAGAAGCGATCCTATCCTGGTGCCTTTTAATCTGAAAACTTCTCAGTTCCCTTCCTGGAAGATCTTTCTGGCAGCCCTCAGAACTTCTCACAAGCGAACCAGCAGCATATCTCCCTGAAACCAAGGCCACTTAGCCGCTCTGCCGGGGGGACACAGGGGCTCTGGGAAAGTCTAACCAAGGGAAAGGCTGAATCCTGTGCCTGGAGCCAATTGCCAGAACTGAAAGCTGTGAGCAGCTCTGGATCAAGCACTTCTGTGAAGTTCTTCCCACAGCACGTGTAACTGACACAAAATAGCCAACTTCCCCCTGCCTGTTTCTTTTCTCCTTTCTGAGCCTCCCCTAGTTACAGGAGCTACAGTGTGGAAGGCTTCAGCTTTCAAGACCAGACTGACTTGGTGACAGGTGCTCTGCTGACAGCTGTGACTTGGAACAAATGTTAATCTCTAGATGCCCAGCTCCAAGCGAGGCATCTAGGGAAGGCGTAGCTGTGGCATGTGGCAAGGGCACTTGCCATGACCCCCAAACTCTCAGAATTCATTCAGAGCAATCCCAGTTAAATTACATACCTAATTAGCTAAACTAAAAAACAGGGGGGTTTCTCTTTATTTCTGCAGTTGTGATTACACATGGCTAGCAAAATGACTGAAATGCTATCGATACGGTTGCTTTTAAACTATACAGGTGTTAATCTTAATTCACAAGGCTTTGAAGCAGGTAAATGATTTGAAATTACAATGATGAAGAGTTAGTTTTAGCAGTTAAGGTTTGATTTGTACCTAGTGATCAGTACATCTCTCTTAATAGTAGCGATTTAAAAAGAAACAAAACAAAGGACTTTCAAATTCTGGATTAGAATTCAAGTTTGCTATTTGACTTTTGAATTCAATGTACTGCGCCACAAGCCAGACTGCTCTATGTTATGTACATTTAATGTGTATCTAAGGAGAAAAAAAATGACTAGCACTATTGAAGATACTGCAAAATTGCCACAGTTACTGCTTAGAAATACTAATTTCCCTCTCTTCTTTCTTAAAGTATATATTACAACTCTTCCATAACTTAATGCAAACAAAGTAAATTCATCTCTTCTCACATCTTAAAGCAAAGATATCTTTGTTTACATGCGAGAATAATAATTCTATAATAATAGCCTGGCACTAGGAGCCAGGTCTTTATATTAGGAAATAATAATGA TCONS_00074997 r 5' 0 TCONS_00074997 r 5' 0 EMBV3_09434 GGGCCGAGCAGGGAGGAGCAAGGAGTCCGGATGGGTGGAAAATGAAATCTACGGTTATTA Gene GeneID:527089|LAYN:XM_002692987:144_cdna Constitutive 2 NULL GeneID:527089 15 GENE LAYN NULL layilin EMBV3_04152 CAGCCCATGAAACACACACGGTTCTGGATTTGGACTCTGCTGTGAAGTGGCTGGAAAGGA Gene GeneID:510312|STX5:NM_001075444:67_cdna Constitutive 0 NULL GeneID:510312 29 GENE STX5 MGC143195 syntaxin 5 EMBV3_27840 GAGGGACCAGGAAGAGAAAGCATTAACTCACAGAAATTGCTACTAAGAATTGCTGGGTCC Gene GeneID:517995|GPRIN3:XM_002688165:60_cdna Constitutive 0 NULL GeneID:517995 6 GENE GPRIN3 NULL GPRIN family member 3 EMBV3_13594 CGGGAAGAAGCAGATCCAGAAACTAGAAGCCAGGGTGAGGGAGCTCGAAAATGAGGTTGA Gene GeneID:408020|MYH4:XM_002695806:141_cdna Constitutive 0 NULL GeneID:408020 19 GENE MYH4 NULL myosin, heavy chain 4, skeletal muscle EMBV3_02456 CAGCAGCAAAGCATCACTTGGGAACATGCTCGAAATTCAAATCATCAGGCTCCGCCTCTG Gene BVT0102_251262 - 1 EMBV3_39406 GK000021.2:33878147-33903349 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01652 AGGGCAAACGGAAGCTGCAGATCGGAGTCAAGAAACGGGTAGACCACTGTCCCATCAAAT Gene GeneID:538998|FKBP2:NM_001113256:69_cdna Constitutive 1 NULL GeneID:538998 29 GENE FKBP2 MGC133593 FK506 binding protein 2, 13kDa EMBV3_41232 GTTCCCCGGGGGAGCGGGTGGCGGACACGGTGGATGCTCGATTTCCTCTGCGTTTCGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36307 AGATAGGAATGGGCACATCCGGGTGGGTGAGGGCAGTACAGACTGTTCCACCATTTGCAT Gene GeneID:507181|GRASP:XM_002687256:106_cdna Constitutive 0 NULL GeneID:507181 5 GENE GRASP NULL GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein EMBV3_29954 TCGTCGCTGTACTGGTACAGCAATCAGCTGGTGGTTAAACAAATTGGGATTAGCTGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12574 CTATACCACTATCATGAGTCGAGGATTATGCTGTGTGTTGGTAGCTGCCTCCTGGATGGG Gene GeneID:523062|LOC523062:XM_002690761:516_cdna Constitutive 0 NULL GeneID:523062 10 GENE LOC523062 NULL similar to Olfactory receptor 4Q2 (olfactory receptor OR14-21) EMBV3_01699 GATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCC Gene GeneID:100337426|LOC100337426:XM_002686238:260_cdna Constitutive 0 NULL GeneID:100337426 3 GENE LOC100337426 NULL hypothetical protein LOC100337426 EMBV3_12282 TGTTTGCACTTTGGGGTGCAACTTACAGGGAGGGCCTGAAAAAAGAATGGGAGGGGACTA Gene GeneID:613326|PTP4A1:XM_002689977:4_cdna UTR3_Alt 2 NULL GeneID:613326 9 GENE PTP4A1 MGC179416 protein tyrosine phosphatase type IVA, member 1 EMBV3_08638 ACGCTACTCTTCGACGAATGCATGTGTAACCAGATCAAATATCTCGAGTTACGATGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30716 GAGATTTATGCCGGGAAAAAAAACAACTGGGATGTGAATGAAGACCCAGGAGAAGATGTG Variant GeneID:614152|BRE:NM_001102274:216_cdna 579^653 3 EMBV3_02461 GeneID:614152 11 GENE BRE MGC165890 brain and reproductive organ-expressed (TNFRSF1A modulator) EMBV3_07903 TTATGGTCACTTTAACATCCCCTGCATCACCTGGCATGGGGCTGAGCACGGACATTCAAT Gene GeneID:282112|UPK1A:NM_176611:514_cdna Constitutive 0 NULL GeneID:282112 18 GENE UPK1A NULL uroplakin 1A EMBV3_39073 TTGATCAAGAGCATTGCCCAGAACCGACACCTGCAGTTTGAGCGCTTCATAGTGGCTGCC Gene GeneID:613844|METTL7A:NM_001035439:116_cdna UTR3_Alt 2 NULL GeneID:613844 5 GENE METTL7A MGC128396 methyltransferase like 7A EMBV3_00896 ACATGCTGACTGCCCCTTTGACCCCACGAAAATCTATGACACAGCCTTGGCTCTCTGGAT Gene GeneID:508550|KRTCAP3:NM_001035062:84_cdna Constitutive 2 NULL GeneID:508550 11 GENE KRTCAP3 MGC128201 keratinocyte associated protein 3 EMBV3_35442 AGCTGTCACTGCTCCCCCAGCTTTGGACACCTCCTCGCTCACAGAGACACCCCCAGAACT Gene GeneID:539638|LOC539638:XM_002691743:244_cdna Constitutive 0 NULL GeneID:539638 12 GENE LOC539638 NULL hypothetical LOC539638 EMBV3_42716 TTTTTTTAAATCAAGGAATTGTTACAATGATCTCAGTTTCTAGTATTGCTGCTTGAATAA Gene GeneID:534105|RMND1:NM_001102164:5_cdna Constitutive 2 NULL GeneID:534105 9 GENE RMND1 MGC159836 required for meiotic nuclear division 1 homolog (S. cerevisiae) EMBV3_13889 AATGACGGGGGCAGAACTTTGAGCAGTTGAGAGGCGAAAAACTCCACTTCCAGGGTGGTT Gene BVT0102_358625 + 1 EMBV3_21337 GK000017.2:74623252-74633531 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08874 AGTCGGGGGTGCTGGACACGCTGACCAAGGTTTTTTAAAGCATCACTTAGGAGCTGCTAC Variant GeneID:539291|MYCBP:NM_001038565:251_cdna 101^149 1 EMBV3_25833 GeneID:539291 3 GENE MYCBP AMY-1 MGC133485 c-myc binding protein EMBV3_27966 GACTCCTGTCTGCTAGTTTATGAAGATGGAGCAGGGATAGGGAAGAGGCGAGAGCCACTT Gene BVV0102_298621 + 0 NULL GK000011.2:75078898-75084311 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025525 1 XLOC_014781 Coding TCONS_00025525 XLOC_014781 Coding Coding C11H2orf44 11:75065538-75080553 = TSS18518 3753 1 TCONS_00025525_7 676 4 0.75029972026109 0.00172008930355754 0.00138421191353642 0.00143401876879893 0.000622632457372622 0.000460849221120719 0.00147475199427174 0.00125821128144704 0.000415591545577888 0.00223554624285919 0.000104499010835257 5.81399561655778e-06 2.03279653941198e-84 3.59708288587627e-05 7.28090638786379e-05 1.70998652033578e-07 0.00070374294368527 0.000335590099100431 0.00143739291379588 0.00255031384911961 0.000985134862735233 0.000557318711925323 0.000346021911657537 0.000251233496571427 0.000219670137776502 0.00116508426018483 0.00196016380414336 0.000548862773502399 8.05066340695606e-05 7.70320806888662e-05 0.000136211456780174 XM_001253009.5 C11H2orf44 PREDICTED: Bos taurus chromosome 11 open reading frame, human C2orf44 (C11H2orf44), transcript variant X1, mRNA. 0.0 6769 100.00 0.999733546496136 NM_025203.2 C2orf44 Homo sapiens chromosome 2 open reading frame 44 (C2orf44), 0.0 2679 75.63 0.993338662403411 TCONS_00025525_7 sp|Q9H6R7|CB044_HUMAN CB044_HUMAN WD repeat-containing protein C2orf44; 0.0 1010 73.52 0.995562130177515 1 coding 0 0 0 0 -0.0564612763614652 0.793921662256751 -0.0145876988914425 0.768287432023899 CCGCAGGCCGCGGGAAACTGATTTTCTGTGGGGCAGTGAGACCAAAGAGAAGCCTTATCAGAAAGGATGGAGTTGGGACAAGGAAAACTTCTCAGGACTGGACTGAATGCATTATATCAAGCAATACACCCAATCCACGGCCTTGCTTGGACTGATGGGACTCAGGTAGTCCTGACCAACTTACAGCTTCACAGTGGAGAGGCCAAATTTGGGGACTCAACGGTCCTTGGACAATTTGAACACGTGTATGGGGTGTCCTGGGCCCCGCCTGGTGCAGCTGACACACCCACTCTGCTCGCTGTCCAGCACAAGAAGTGTGTCATCGTGTGGCAGCTGTGTCCTAGCCCTGCAGAGACAAGCAAGTGGCTGATGTCTCAGCCCTGTGAAATCAGACAGTCATGCCCTGTCCTTCCCCAGGGCTGTGTGTGGCACCCAGAAAGTGCCATCCTGACTGTGTTGACTGCTTGGGATGTCTCCGTGTTCTACAATATCCATTGTGACAGTTCCCAAGTCAAAGTGGACATCAGCACTGAAGGCCTCATTTATTGTGCATGTTGGACCCAGGATGGCCAGAGGCTGGTGGTGGCAGCAGGCAGCAGCCTACATTCTTACATTTGGGACAGTGCTCAGAAGACTCTTCACAGGTGCTCCCTCTGTCCCATCTTTGATGTGGACAGCTACGTACGTTCAATCAGAGCCACTGTGGACTCACAAGTCGCTATAGCCACTGAGCTTCCGCTGGATAAGATTTGTGGGTTAAATGCTTCTGGAACTTTTGACATTCCTCCTAGTGGTGAAGACACTTGCCTGCATGCTTTACCAGTTACTGATCGAGTTTCCTCTGAAACAAATTCTGAAACACCAGTGTCGTCATCCTATTCTGAGCCTCTGGATCTAACTCATATCCACTTCAACAGATTTAAATCTGAAGGTAGTTCTCTTACTTGTCTAAGAAAAAAAGACTACTTGACAGGAACTGGCCTGGATTCTTCACATTTGGTCCTCTTGACCTTTGAGAAGGAGGTTACCTGCAACAGAAAAGTCATCATTCCAGGCATTCTGGTTCCTGATCTAATAGCATTTAATTTTAAAGCACAAGCAGTCGCAGTGGCTTCCAATACATCTAATGTAATTTTTATCTATTCTGTCATTCCATTATTAATGCCAAACATCCAGCAGATTCAGTTAGAGAGTAATGAAAGACCAAAAGGCATATGTTTCTTGACAGATAAATTACTATTAATTTTGGTGGGAAGACAAAAGTCCATGGACTCGGCATTTCTTCCTTCTTCAAAATCTGACCAGTATATGATTCGTTTGATTGTTAGAGAGGTAATGCTGAAAGAAGACTCTCCAGTGACACTGAGTGAAAACCAAAGTGGTAACTCTGCTTTCAGTACTCTGATAAATAAAACAAATATAAAAAAGCTAATTGAAGATCTTTCACCAGATTTTTGTCACCAAAGCACAGGGCTCTTGTTCACAGCTAATAGCAGCAGTCAAAGTGGACAGCCTGGAAGAACCCTTATTAAAGAAATAGAAAGTCCGGCATCCAGCATCTGTGATGGCTCCACATTCCTAGAAACTCTAGATGCCAGGCCTGTTAACTTGTCAGTAACACCGCCCAGACCCAGCGGCACACCAGCCCACACCAGTACCGCAGAACCTCCTAACTTAGAACGGGAAAAGGAAACGTACCAGCTGTCTAAGGAACTGGAAGTTGTATCTAGGAACTTGAGTGAAGTGCAGCGACATCTTTCTGAACTCAGTGACTTTCTGCACAATGGAAGGAAATCCTCTCCAGTGTACCCACTCTCTCAGGATCTGCCTTATGTTCACATCACTTGCCAGAAATCTCATTTTGTACATCCTGTTGTTGAAAAAAGAATGATGCTTCTCTGCAATGGCAAGCTAAGACTCAGCACAGTCCAACAGACTTTCGGCCTCTCTCTTGTTGAAATGCTGCATGACTCTCACTGGATCCTTCTCTGTGCGGACAGTGAAGGCTTCGTCCCCTTAACTTTCACAGCCACACAGGAAATAATCATAAGAGATGGCAGGTCAGATGACTTCCGAAACTCTGCCTCAGAGCCTTGATAGCAGTCCTTCTCTTGGAGTCTTCAGTGATGGATTCCCCAAAGCGGAGATACTACCGGCTCTTCTGACCATACTGGCAGTGTAGTCTGATACTTGTCAGCAGAGTATGTGCTGAACAGCCTCGCAGACCAGGCCATTACTAACAAGAGCTGTTTTCCAAGGTGGACGCTCCCCAGCTGGGGTCTGCAGTGCCGCTGGGAGGTGAAGCACTTGCCATGGCTGGCTCTGCCACTTTTCCCCCCAGGCTGCTGTTCCCTGCTCTGCAGCAGAGCCCAGTCTTTGTTAGATGGCTCAGAAAGCAGTTATTTATGTATTCATGACTGTGTGGTTTTGTCTAAGGGCAGAATTCCCGGCACAAAACAATATTATGGTGCCATATGGATTGTGTTTTATGGTTTCTCTGAGGCTTTCTGTCCCTTGCCCAAAACGGCATTAAAGCTTTTAGAAGCACTTAAAAGGTACCTCAAAATTGTAATAGATCTTCTTCTTGGCTTCAAGTTGAGTGTGAGGAGTGCTGGAGAACATCTGCTCCAGCGTCTCTTTTTACCCTAAACGAGTAGGAATGCACAGAGCTCAAAGGAAAACAAAAAATCGATTCATTTCTGCTCCCAGGACTACCTAGAACAGGAAGTAGTTCTGATGTTGGATTTAAACCTAACCCTCTCACTTCCCTAGAAAATTCTGGCTGACAAAAGTCCAGGAGCTCCTGAAATCTGGCCCTGGGCATATTTCAAATGATACTTAAAGTGCTTTGGCTCCCCCGGGCCCCACTGAAGCAGGTCCTGATGTTACTAGCACAGTGCCAAGCACAGGTGAGGCCTGTGGCAGGATTTTGTGCTGTTGTCACTCAGGATTTTCTCCCTGAGAGGTTACTCATCTTCTCTTTTGGGGATCATAAAAATGCCCTATTTTTCTCCCAGTAATAAACTCCCTTAGTTTAAATTGCCACCTTAATTTGTCTATTTTTATGTTCTCCCTGTTCAAGTCTTACAGGCCAGCATAGAATCTGTGAGAGAAAGTATTTCAGAAAGTTGAAGGTTACACTGAATCTGAGATAGTTTCTTATAATTATGGGCTAAAGCACCAGTTTAGCCTAGTGGAAAGAGCCCTGATCCCAGCTTCAGATAGACTCACCACTTTTCACAGAGTCATAAACTTCTGGCACTGCAGCGTAACGAATGGATTGATGTGTGACTAGTCAGAACACATCTGCAGGTACGTTGTTGCAGCCATAGGAGCTCAGATGCACAGGAGCACAAATGCTTCTTCTCTTTTCTTTTAAAGTCATCTGGAAAGATCTTATACCCTTAAGGACTCCTGTCTGCTAGTTTATGAAGATGGAGCAGGGATAGGGAAGAGGCGAGAGCCACTTTGCGGTTGAAATGCATTAGAGGAGCTGCTCGGGTAATGGGAATGGAGGCCACTTGTCTGGAATCAGTTGCTGGAGAGCAGTGGCTGAGGACAGCCTGAGGCCTGGCTCCATTTTCGAAGGAAGTGTCTGGTGGGGTGAAACCACACAACTGTGAAGCCTCAAGACGGGGTCTGGGGGACCTGATGGCAAAATCTGTGTAGGTGCCCCAGAGTGTATGTTACAATCGTTTCGCTGGTCAGAATCCTGTGAATGAGTCTTCAATAAAATCACTAATGGTTGTTGCA EMBV3_23551 GCAGGATCTGCCCAATTGACATCACCCTAGCACAGAAAGCTTCCAACAAAAAGGTGACCG Gene GeneID:511844|LGTN:NM_001035104:55_cdna Constitutive 3 NULL GeneID:511844 16 GENE LGTN MGC137442 ligatin EMBV3_42426 CCACAGTGAGGCTAGGCAGCCAGATTTAAGTGTAGGTTTTCTGATGCTAACCTGGGGGCT Gene GeneID:784390|ASB9:XM_002700396:66_cdna Constitutive 0 NULL GeneID:784390 X GENE ASB9 NULL ankyrin repeat and SOCS box-containing 9 EMBV3_05689 CTGGAGTGGGGCACGGAGGATGACGAGTACCTGCAGAAGGTGGAGAGGAACCTGGAGAAA Gene GeneID:519899|HDAC11:NM_001102056:28_cdna Constitutive 0 NULL GeneID:519899 22 GENE HDAC11 MGC148838 histone deacetylase 11 EMBV3_31037 CTGCGCTTCTCCCCAAAATTCTGATTTATGTGGTCTGGGACACAGACTGAGTATTGGGAC Gene GeneID:538974|TMEM19:NM_001101184:8_cdna Constitutive 0 NULL GeneID:538974 5 GENE TMEM19 NULL transmembrane protein 19 EMBV3_24431 GCTAAGGAGGGAAATCTGGAACTTCTAAAGGTTAAACTTTCCAGTTTGAATTTAGATGAT Variant GeneID:513438|MRPS35:NM_001075619:8_cdna 387^587 1 EMBV3_41238 GeneID:513438 5 GENE MRPS35 NULL mitochondrial ribosomal protein S35 EMBV3_05883 AAAAGTTATTTCAGTTTTCATGGGTTAACAGTCTAGAGTTTTGGTCCATCCACTCCTCCC Gene BVV0101_033247 + 0 NULL GK000019.2:38178539-38202538 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30911 GTATGGATGCTGTTGAGTACCCTGCTGTTATCATGTTGCAGTGCCATCTCTCTGATCCGG Gene GeneID:664645|TAS2R3:NM_001046632:733_cdna Constitutive 0 NULL GeneID:664645 4 GENE TAS2R3 T2R3 taste receptor, type 2, member 3 EMBV3_02235 GTCAGCATAAAGGATTTCCCTCTTGAGACATTCCACTGCCCTTCTCCCAAAAAGATGTCA Gene GeneID:531455|ATG4C:NM_001082442:69_cdna UTR3_Alt 2 NULL GeneID:531455 3 GENE ATG4C MGC148409 ATG4 autophagy related 4 homolog C (S. cerevisiae) EMBV3_06608 GCCACTCGGAGCTAATCCACAACCTCCGCACATGCATATGCACTAGAACTTCTATTTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43581 GGCCCAAATACCAATGGATCTCAGTTTTTCATCACCTATGGGAAGCAGCCACATCTGGAC Gene GeneID:615703|PPIL3:XM_002685486:211_cdna Constitutive 0 NULL GeneID:615703 2 GENE PPIL3 NULL peptidylprolyl isomerase (cyclophilin)-like 3 EMBV3_43234 CTGTGTCTCTGATCCGAAAGAAGGCCAAGGTGCCAACTAAGTGATACTGGACGTGCTGAT Gene BVV0101_048061 + 0 NULL GK000013.2:2411117-2449017 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29109 TCCTGTGCTCTCCTGTGAGTTAAAGTAGGTGAAGGAGCCCAGTTCACAATTCAACAAACC Gene BVV0101_030612 + 0 NULL GK000017.2:18761861-18813142 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19302 TGGAGATTGTGAACCCACAAGCAGCAGAGAAGAAGGTGGCGGAGGCCAACCAGAAGTACT Gene GeneID:513577|PRPF31:XM_002695433:46_cdna Constitutive 0 NULL GeneID:513577 18 GENE PRPF31 NULL PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae) EMBV3_20073 GAATGTCTGCCGAAATGTTCAAGTTTACCCAAAGAGAGGCGCCGATGGGACACTAATGAG Gene BVT0102_147229 + 0 NULL GK000016.2:46521739-47552970 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069403 TCONS_00069406 TCONS_00069409 TCONS_00069402 TCONS_00069407 TCONS_00069408 TCONS_00069405 TCONS_00069400 TCONS_00069404 1 XLOC_041935 Coding TCONS_00069408 XLOC_041935 Coding Coding LOC100848595 16:47372146-47431976 = TSS51750 626 1 TCONS_00069408_1 93 0.0447284345047923 4 0.989603703889418 0.00752132103060437 0.00290746049807481 0.00549401916984515 0.00268249593594574 0.00339276882920193 0.0015989764240555 0.00303060982107242 0.000901159056721884 0.00260935985988054 0.00186091204751226 0.000245997673150969 0.000926378571076154 0.00074743983266285 0.00260141209661902 0.000761001653189815 0.0185813033506943 0.0128362663581555 0.0216439038919391 0.00210830039377363 0.00188051657283109 5.33518867818221e-05 0.00837974186531316 0.00652002530583671 0.0159177141284495 0.00288267799215758 0.00374458359741444 0.00148382991145602 0.00154568084228661 0.00440934308789282 0.00483595671348805 XM_005194825.1 LOC100848595 PREDICTED: Bos taurus calmodulin-binding transcription activator 1-like (LOC100848595), mRNA. 4e-92 342 100.00 0.300319488817891 NM_001195563.1 CAMTA1 Homo sapiens calmodulin binding transcription activator 1 (CAMTA1), 0.0 823 97.93 0.769968051118211 TCONS_00069408_1 sp|A2A891|CMTA1_MOUSE CMTA1_MOUSE Calmodulin-binding transcription activator 1; 2e-37 136 95.38 0.688172043010753 0 noncoding TTTCCTGTCTGCTGGCTACTGCAGAAGAGCCCAGTGAACTAGGAAGGCTCGTGCCTAGGATGGAAGGAGATCTGGGGCCAGAGCCACGGCTGGGGGGAGAGCTGCCTTCTGACTTACTGTTGTGGACTCTACATGAGCAAGAAAGCGTTTCCCAAAGTGTATTCTGCGGAACTAGCACCTACTGTGTTCTCAACACCGTGCCACCTCTAGAAGATGATCATGGGAACAGCAATAGTAGTCATGTAAAAATCTTTTTACCGAAAAAGCTGCTTGAATGTCTGCCGAAATGTTCAAGTTTACCCAAAGAGAGGCACCGATGGAACACTAATGAGAGATCATGATGCAGCCGTCCTTTTGGATTTCTTTTTAATAATGTGTGACCCTTCACCTTTGATCCCCTGACCTGCATTACCTTGGTAACCATTTCATTTTTTAATTTAATTTCATTTTTTGATTTTGGTGTACAAGCTGTAACATTTCATCTCTCAGAGTGTAACACGCTGATTTCCTCAAATAGAGATACCCCTTTGAGCGATAAACTTGCAAAATGCTGTCTTCGTTTTCTGTATTAAAATTCATTTCAGTTTTAAAAATAAAGTGTAATCTGTGTTTTCATCCTTTTAAAA EMBV3_03502 CCCCTCCTATTTCTCTCAGAAGGAACTCTCTTCAGTGCATTCAAAGCTTCTCCCCACAAC Gene BVV0102_110246 - 1 EMBV3_43229 GK000001.2:71035494-71072074 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001055 TCONS_00001057 TCONS_00001059 TCONS_00001060 1 XLOC_000247 Coding TCONS_00001060 XLOC_000247 Coding Coding KIAA0226 1:70996597-71048059 j TSS509 6266 1 TCONS_00001060_8 911 0.019470156399617 20 0.878626532714094 1.76836282384091e-08 1.79914122021704e-07 0.000628775457727892 0.000232378891704962 6.66704916093504e-15 1.58204883845174e-05 4.62250810546391e-10 0.00010068059670017 0.000117494634994869 5.15867462327233e-06 1.60553355542311e-05 2.72598232499793e-74 0.000100880123793328 6.18288145159982e-11 9.16843075123663e-05 0.00132990431859413 0.000129774584136932 0.000120122893746815 0.000419236409865374 0.000895536067353459 0.000338058691040803 6.51142585153063e-05 7.0790810505446e-07 3.04901973232732e-08 0.000160813883723484 0.000155388137953017 0.00030265639146608 0.000112949745819482 2.59040399851573e-19 5.8260574613714e-09 XM_005201392.1 KIAA0226 PREDICTED: Bos taurus KIAA0226 ortholog (KIAA0226), transcript 0.0 9779 99.18 0.872805617618896 NM_014687.1 KIAA0226 Homo sapiens KIAA0226 (KIAA0226), transcript variant 2, mRNA. 0.0 4466 84.31 0.644430258538142 TCONS_00001060_8 sp|Q92622|RUBIC_HUMAN RUBIC_HUMAN Run domain Beclin-1 interacting and cystein-rich containing protein; 0.0 1588 91.40 0.979143798024149 2 coding 1 1 1 1 -0.128611312817124 0.392248675026864 -0.00795864437905591 0.902253825500188 TGAAGCCGGGAGAGGTTTGGGAAGGCTCCCAGAGCACGAGGAGACGGACAGGAGGACTGCTGTTGTGGGCGACTTGTTTGGGAAGAAATTCTGAAAGGAGAGACGGGGAGGAGGGAGCATTGGCAGCTGCTGGGTAATTTGAAGACTACTGTGGAGGGTTTAGTGTCAGCCAACAGCCCCAATGTCTGGTCCAAGTATGGTGGCCTGGAGCGGCTGTGCAGAGACATGCAGAGCATCCTCCATCATGGGCTCATCCATGACCAGGTGTGTTGCCGCCAGACTGATTACTGGCAGTTTGTGAAAGACATTCGGTGGCTCAGTCCCCACTCAGCCTTTCATGTGGAGAAGTTTATCAGCTTGCACGAGAATGGCCAGAGCAGCACGGATGGTGTGAGTGAGCGTGCCGTGGCTGAGCTGTGGCTGCAGCACAGCCTGCAGTGCCACTGCCTCTCAGCCCAGCTCCGACCTCTGCTGGGGGACAGGCAGTACATCAGAAAATTCTACACAGATACTGCTTTCCTGCTAAGCGATGCCCATGTCACGGCCATGCTCCAGTGCCTGGAAGCAGTGGAACAGAACAACCCTCGCCTGCTGGCTCAGATCGATGCTTCTATGTTTGCCAGAAAGCATGAGAGCCCACTCCTGGTGACAAAGAGCCAGAGCCTGACAGCTCTGCCTGGTTCCGCATATACTCCTTCAACCAACAGTGGTCAGCATTCCTACTTTGGGTCCTTCTCCAGTCTCCACCAAATCCCCCACCACAGCTTAGAAAGAAGATCTACTTCCTTTTCACTCTCTGGCCCGCCCCGAAAACCTCAAGAAAGCAGAGGGCCTGTCTCAGCAGCAGAGGATCAAACCGTCCTAGACCCTCTCCTTCCAATCACTGCATTAGCCAAGGACTCCCCCTCGACCCCCAATGAGATGAGCTCCAGCACTCTGACCAGCCCCTTGGAAGCATCCTGGGTCAGCAGCCAGAATGACTCCCCAAGTGATGCCAGCGAGGGGCCTGAGTACCTGGCCATTGGCAACCAGGACCCCCGGGGCCGGACCGCCAGCTGTCAGAGTCACAGCAGCAATACTGAGAGCAGCAGCTCCAATTTGTTCTCCTCCAGCAGCTCTCAGAAGCCAGACTCTGCTGCTTCTTCTCTAGGGGACCAGGAGGGAGGTAGGCAGAGCCAGTTGTCCAGTGTCCTTCGCAGATCTAGCTTCTCAGAGGGGCAAACGCTCACTGTCACCGGAGGAACAAAGAAGAGCCATACTCGCTCCCATTCGGACACCAACATTGCCTCCAGAGGAGCCCCAGAATCCTGCAGTGATAAGTCGAAGTTGAGAGGCCCCTTGTCCTACTCTGGTCAAAGCAGTGAAGTCAGCACACCCAGCTCTCTGTACGTGGAGTATGAGGGCAGTCAGTACCTGTGTTCAGGAGAAGGCATGTTCCGAAGACCATCAGAAGGACAGTCCCTTATCAGCTACCTATCTGAGCAGGACTTCGGCAGCTGTGCAGACCTGGAAAAGGAGAATGCCCACTTCAGCATATCAGAGTCCTTGATCGCTGCCATCGAGCTGATGAAGTGCAACATGATGAGCCAGTGCCTAGAAGAGGAGGAAGGGGAGGAGGACAGTGACAGGGAGATCCAGGAGCTGAAGCAAAAGATCCGCCTTCGTCGCCAGCAGATCCGCACCAAGAACCTGCTCCCTGGGTACCAGGAGATGGAGCATGGAAGCTTTCGGCTCACTTCCAGCAGCTCCCAGTTCAGTTCACGTGATTCAGCACAGTTCTCTGACTCTGGCTCTGCTGATGATGAGGTTGATGAATTTGAAATCCAAGATGCTGACATCAGAAGGAGCACGCCCTCCAACAGCAAATCCTTCATTTCCTCTCAGTCCTTCTCCCACTGCTTCCTGCACTCCACGTCTGCTGAGGCAGTGGCCATGGGGCTCCTGAAGCAGTTTGAGGGGATGCAGCTGCCCGCCGCCTCGGAGCTGGAGTGGCTCGTTCCAGAGCACGATGCCCCTCAGAAGCTCCTGCCCATCCCTGACTCACTGCCCATCTCCCCAGATGATGGGCAGCATGCTGACATCTACAAACTGCGTATCCGCGTTCGCGGCAACCTGGAGTGGGCGCCACCCCGGCCACAGATAATTTTTAATGTTCATCCAGCCCCAACGAGGAAAATCGCTGTGGCCAAGCAGAATTACCGCTGCGCAGGTTGCGGCATCCGGACTGATCCTGACTACATCAAGCGGCTGCGGTACTGTGAGTACTTGGGCAAGTACTTCTGTCAGTGCTGCCACGAGAATGCCCAGATGGTTATCCCCAGCCGCATTCTGCGCAAGTGGGATTTCAGCAAGTACTACGTCAGCAATTTCTCCAAGGACCTGCTCATTAAGATCTGGAACGACCCTCTCTTCAACGTGCAGGACATCAACAGTGCCCTCTATAGGAAGGTCAAGCTGCTCAATCATGTCCGGCTGCTGCGGATCCAGCTCTATCACATGAAGAACATGTTTAAGACCTGCCGACTGGCCAAAGAGCTTCTGGATGCCTTTGACACCGTTCCAGGCCACCTGACGGAGGATCTCCACCTGTACTCGCTGAATGACCTGACTGCCACCAGGAAGGGGGAGCTAGGGCCCCGGCTTGCTGAGCTCACCAGGGCCGGGGCTGCCCATGTAGAGCGATGTGTGCTCTGCCAAGCCAAGGGCTTCATCTGTGAGTTCTGCCAGAATGAAGATGACATCATCTTCCCCTTTGAGCTCCACAAGTGCCGGATCTGTGAAGAGTGTAAAGCATGCTACCATAAAACTTGTTTCAAGTCTGGGAGCTGTCCCCGCTGTGAGCGGCTGCAGGCCCGGAGGGAGCTGCTGGCCAAGCAGAGCCTGGAGTCCTACATGTCAGACTACGAGGAGGAGCCCACCGAAGCCTTGGCCCTGGAGGCCACTGACCTGGAGACCACCTGAGAAAGCACGGAAAGCGCTCTTCCTAGGGGCGAGGGTCACACATAGTGCGGAACTGAGCCACCCTCCTAAGGACTTTCCCCACTTGGTTTTATCTTTTTTTTTTAACTGTTATCATAATTATTAATTTTTATTATCTGTCTAATGTCATGTGTATTCAACCTTATATAGGTTGGTGGGGTCCAGTCTATTGTGACAATTTGCAGGTACCAAGCATTTCCATCAGAGCTGACATATGGGTCCCTAAGTGAAGCTTCCAGTGCCTCTGTTAGGGGAGTGGACAGTGAGACCCAGTTCTTCCAATATCCATGGCCTTCTCCACTTGGACCAGATCTGGTTTCAGCTGCATCTCAAGAATCATTTCCAGTTTTATTTTGTTTTAATTCTGGAGCTTCTGAGCCAGGCCTTTCTCAGCGAACTCACTTCTCCTTTGCTGCTGAAACAGGAGTGTGGAGTTTTCTCTCTCCCAGTCCTGGAACAGGGTCACACCCTGAGGAGAAGCATCAGAGAATGGGACTGAGTCATGGGCATTCTTATGTAGGTGCTTCTGAGGCCATAAAAACAGTGTTACTGCTACCTTGGACTCTTCAGACACCTCGAAGAGGCAGTAATAACTTTCTTGTATTTTAGGCATAGATGATACCACAGGCTGACTTTCTTTGTCTACCCTGGGGGACTTGACACAGACCAGAATTGATACTTAGACCAGGACTATTTCAAGCATAAGTGAGGCCACAACTCTTGTATAAGGAGCATTTGTTCAGTCAGAGGAGCTGTTGGCCTCCTCTTGGGTGATAAGGTCCCTTTTAGTCAACATAGCTCTGGTGCAGGTTTGACCTTTCAAGCTCAGACAAATCCCTGGTGCCATCTTAAACTGAGGACAGAAGCCCCATCCAGCATCTCATCCGTGAGTCTCTTGCCACTCTGTCCTCTGTTAGGAGGTCACTGCAGTTCTGAGTAGAAGCCTGGCCCAACTCCATGCTCTCCCTTCCCTCCTGCAGTGGGGCTGGGACCCTCCCCAGTGGTTGAGCTCGGGGCTTAGTTTCTTTTGTCAACGTTGAGGTGAAAGCTTCCTGCTATTAGTGGTGTTAAAAGACTTAATAGTTTGTGGCTGTGACCATGAATGTTCCTGTGTTCTTATGATAACAAGAACCTTATGCCAATTATGCACTTAACTCTTTAGCCTGGTGACAGTAGTATATGCAGTCATCCTTATTACTAATTTTAACACACACCCACACCCTTTGTTAATGTGTGTTTTGATGGGAAAAGTTTTTGAAGGGACTGTGTATATGTTTGTGGCATTCTTTAAGTTGCTGTAGCTCCTGACCTGTCTGTAAAGCACTGGTCAGGGTCACAGCTCCAAGGGCTGGCAGCTCTGTGAACTAAAGCCCACAGCATTTTAGTTCTGGGGCTGACTTCTTCCTGGGTGTCTGTCTTTCCATAGTTGGTTGCTAGTAGGGAAAAACCTGCTGTGGGCGCTGCCCCGGGAAGCTGAACAGAAAGTTGCACGTGGTTGGTGGAAGCTGCTGAGTGTCTGAGTCGGAGGCAACCAGGAGTGTCACTGGAAGTAGTAGGGGCGGTAAAGTAACAGAGCTGAGGCTCCCCCAGGACAGGAGGGAGTGGGAAGAAGTTGGTGTCTGGCATTGGTCCCTTTGCCTCAGACTTGGGATCTGAAGGCCACGTCAGGCTGGAAGACCCTGAGGCTGTTCTCCCTTCAGTTCATGGCAGGGGCAGAGGGGCTGTGAAAGCGCTCCAGCCCAGCCCAGTGTTGAAGGGCAGACTAGAAACTCCCTGGTCCATCAAGGAGCTTCGGAATGACATTGTGAAACTCTAGCCTCGCTGAGAATTAGGCCTCAGATTCAGACTGAGATGTTTGTGAAAATGGTGAGCTCTACTTCCAGTCCTGGTTTAAATTGAAAATCCAGCTCCTTACTCCAAGTCACTACACTGGAGGAAAGATGTCCTCTCGTTACTGTCATGCGTGTTTCATGTAGCACAGGATGAAAGGATGGAAGACGCTGACACTTTCTAAAGCTGAGCTCAGCAGTGTGCTCCGGGGTTTTCACTTTTTTTTTTTTTTTTTCCTCCAGCTCCCCAACCCTGTCCCTCTAGGCTGCATATTTGTTTTAGTGACCTTGACATTGCTTTCCTCACTGTCCAGATACCATTTATTTATTTATTTGAGAGTAGGGGGAGAGTGGAAAGAGGATGGGGTGTTTTGAAAGCACTTTGCAACTTATCAGTATCTGAAAATCCCCACTGTTGTGGGGAGAAGCTTTGAATGCACTGAAGAGAGTTCCTTCTGAGAGAAATAGGAGGGGAGATGTGTTCTTTTCTATAAATAAAGGGAAAAAAGAGTTTGCTTGCAAGGTGGAGACAAGATTCAAGACATAGCAGAAGAGTGGAAGGCAGATATTTTCCACTTAAATGAGGCTGTTATTAACTCTGTCTACCAAGACTTTAGAGCTTTTGTTGAATTCACATAAAAGGAGCAAGAGTCTAAACAGAGATGTTCTCGTGTGTGTACAACTCGTGTTCCAAACTGAGTTTCTACTTGCTGTAATTCATACACAGCCTAACGTATCATTGTCACCTTTAATAAACTAAGGAAATGAAATTCTGCTTTTTACTTGCCTATCTTGACTATCAGGAAGTGGTATTGAGTGTCCACTGTAAAGTGGACATGTTGGAAAATTCAGGAAATTTCTGTTACGATGCAAAGAAAATTGGACCTTACAAGTCAGGAAAAGTGGTTTGGAATGCTTTGTCACTGACTTGCCACATGACCTTGAGCAAATCAGTTCACCATTCTAGACGTCTATGTCTTTGTGTATAAAGTACTTTGTAGCACTTTACGATGCATGGGGTGTGCCCACTACCAGTCCCCTTGGTGTAACGGCCCCCTGAAGCGAGTCAGATCTTCCTCTCCACAGAGTCTGAGTTGTCTTAGATGCTTCAGTCCCCACTTCTGTGAACAACCCTCTCTGAGTTTCTCTTTCATGCTTCTGGCCTGCTGGAGCTCCAGTTACACCCTGCAGCTTTCTGAACATTTCCCCTTCAGTGTCCTTTGGTCAGCTCCAGCCAGTATGTCTAAAGCCAACGTAAATATCATATTTCCTCAAACCTAACCATTAGTCACCCTGGTTTGCAAATTCATTTCCTCCTCTGAGTCAGGTGGCATTTCTGACTAGGAAAGCAGTGTCTCCTCACCACCTGTTGTCACGTTGTGGTGATTTTTCTCTTTAAATCTCATTCCTTTTCTACCACTAGCACACAAATTCAGGTTCTTATCTTAAATCTCAACC EMBV3_10973 ACAATAGCAGTGTATGACGCAGAGAGCTCAAACCCAGTGCTCTGTGATAACCTAGAGGGG Gene GeneID:504870|ACOT13:NM_001101845:50_cdna UTR3_Alt 1 NULL GeneID:504870 23 GENE ACOT13 MGC152510 THEM2 acyl-CoA thioesterase 13 EMBV3_36045 AAGCTTTCCAAAGTCACACAGCTAGCAAGTCACAGACCCTAGATTATTCAAGCCCAAGGG Gene BVT0102_353745 + 0 NULL GK000011.2:95588272-95622967 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10406 GCTCCGTAGCTCCCTGAACTGCAAGAGTTTCAAGTGGTTTATGACCAAGATCGCCTGGGA Gene GeneID:787200|GALNT10:XM_002689328:5_cdna Constitutive 0 NULL GeneID:787200 7 GENE GALNT10 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) EMBV3_02049 TTTTAAGTCCCTCGTCACATTGTGATCCTGTTGTGAAACCATGGGACATCAGGCTCCAAG Gene BVV0102_324753 + 0 NULL GK000008.2:9153465-9214581 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224342 TCONS_00224343 1 XLOC_137514 NonCoding TCONS_00224343 XLOC_137514 NonCoding NonCoding - 8:9162650-9182301 - TSS168265 653 6 TCONS_00224343_1 47 0.522205206738132 3 0.966921119592875 0 0.000292374014659032 0.000148551738743915 0 0 0 0 0 2.59191429953894e-10 0 0 0 0 0 0 0 0 0 0.0001207964737572 0.000285249974980658 0 0 0 0 4.24316027088299e-05 2.67493099827321e-05 0.000269193717602478 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 2e-20 104 73.56 0.264931087289433 0 noncoding 0 0 0 0 0.0359896845945547 0.7918334528347 0.00773923276900974 0.865142373190152 CCCACCGCCTGCCCCACACAATGGGGTGTTGCCCCAGGATCTTGCTCCAGACATTGGGACATGTACAAAGTTACAGAAGAACTCTGGGTAATGAGCTTCGGAAGGAGAGGCTGTGTCTCCTGCCTTTCCAACACAGAACACCTGGGACAGTGCCCAACTCATAGGAAGAGCTCAGCAAATGTTTGTGGGAGTAATTTTTAAGTCCCTCGTCACATTGTGATCCTGTTGTGAAACCATGGGACATCAGGCTCCAAGGTTAGTGTTTCAGGGTTTCCCTGGTGGCTCAGTGGCAAAGAATCCACCTGCCAAGGCAGTGGATTCGTGTTCAGTCCCTGATCCGGGAAGATTCTACATGCCATGAAGCGATGAAGCCCAAGCACCACAACTATGGAGACTGCGCTCTGCAACAGAGAAGCCACCACACTGGGAAGCCCACATGCCACAACCAGAGAAGAGCCCTTAGATCAGCGAAGGCCCAGCAGAGCCAAAAATGAAAGAAGAAATAAATAAAATGATAAAGAAGTGTATCAACCATCAGTTTTACCGTACTCAAAAGCCCATATACTTTGCTTCCTTTCTCATTCCTTTAACTGTTTTCAGTGCCCTTTTCAAGTACTAGAATATTTTTCTGAGATTTATCCACCAAAATTCAG TCONS_00224339 s 3' 5756 TCONS_00224339 s 3' 5756 EMBV3_14515 TCGTAGGAATTATGTGGGTAAATCTTTTTTTGAAGGAAAGTTGAAGTTATTCAGAAAGTC Gene GeneID:616003|TM6SF1:NM_001102295:54_cdna Constitutive 3 NULL GeneID:616003 21 GENE TM6SF1 MGC159520 transmembrane 6 superfamily member 1 EMBV3_34597 ACCCCAAACTCCTAATTTATCCCTCCCCGCACCATAGTAAGTCAGACGAGGAAAGACAAA Gene BVT0102_057564 - 1 EMBV3_04289 GK000009.2:97395407-97434235 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10810 TGACCCTCAAAGACCTCAAAGGTTGACCCTCAAAGACCAAAAAGTGGGCAGTGGCTCAAC Gene BVV0102_084027 + 0 NULL GK000025.2:2275426-2281944 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147658 1 XLOC_089545 NonCoding TCONS_00147658 XLOC_089545 NonCoding NonCoding - 25:2279580-2281770 - TSS110193 2190 4 TCONS_00147658_4 63 0.344748858447489 1 0 0 0 0 0 0 1.63335720723625e-05 0 0 0 7.51505509638402e-06 6.27174666494997e-06 0 0 0 0.000136656905493973 0.000554763744198447 0 0 0 3.28376050516706e-06 0 1.69421798945964e-05 8.37813687320698e-06 0.000229652629282174 4.7455372062966e-05 2.57368068580675e-05 0 0 8.86684640445947e-05 3.98071449551645e-05 XM_005228031.1 NONO PREDICTED: Bos taurus non-POU domain containing, octamer-binding (NONO), transcript variant X1, mRNA. 6e-33 147 90.91 0.0488584474885845 0 noncoding 0 0 0 0 0.0481129091461428 0.707371795402902 0.0757648039460837 0.246999786076653 AGTAACTGCTGAGCTGTTCAGCATCCAGGATCATCACTGGCTCATTTCTCATTGGGTGCCACAGCATGCCTCTCTGGCACATGCCAGCAGCGACCCAGATGAGATTCTCCTTCTCCCCGAGAGAGGTTGCGAGAAAAGCCTCCTTGCCTTGCTCTAGCGTAACTGCCATTTGGGACACAGGAAAGTGTCCAAGGAGGAAGCCCTAGGCTGTTAGTAGGGATGAGGGGTGGCCAGACAGGGAAACCAAGTCCACATGCCCTTCCGGATCCAGAGTAGACCTGGGCAGAAGAGTAGGTAGGTGCCCAGGGCACCCTCTGCCTGGGAAGACTGAACACCAACTTTGGCCATGCATGGTGCTTCTAACAAGTTAGGCTGTTCAATGGCCTAATTAGTTATCGAATGGAAGTCCTACTGCTTGCCACTCACAAAATCAATTACATACTCACAAATGTTGGTGGCAAAAGAAAAGTACTTTTAATCAGAATGCTGGCAATCTGGGGAGATGGTGGACTCAAACTCCCCCAAAAACTTTTAAAGGGAAGAAATCTCAGTTAGTCCTTGAGATCTGGAGTCAGAATTGTCATGAAACTGTTTACCTCAGATTGGAACTTGAACCCATGTGCTGGGGCTCCAAATGAGCCAAAACGTTGCTTGGGACTTGAACTCACAAGATTGGGACTTGAACCCAGCCAAAACCAATAGTCTTCCAACTGAGATCACAGACCTGGTTTCAAGACCTAATGAACCTCGTATCAGAAAGAATTCAGTGAGACACAAAGTGGTAGCTAAGAAATGTATTTATTCAGAAAGAAACAACACTCCATAGCGAGCAGGGCATCGCAGAGGGTGAGTGTTGTGGTCTTGATATACGGTGTAGTTACTTTTTATGGGTTGGGTAATTTCATATGCTAATGTGTTAGTGTTAGTTGCGTCTGACTCTGCGACCCCATGGACCGTAGCCTGCCAGGCTAGTCTGTCCATGGGATTCTCCAGCAAGAATACTGGAGTGGGTTGACATTTCCTACTCCAGGGACAGGCTAATGAGTGGGAGGATTATTCCAACTATTTTGGGGAGGGGGTGGAGATTTCCAGGAGTTGAGCCACTGCCCACTTTTTGGTCTTTGAGGGTCAACCTTTGAGGTCTTTGAGGGTCAAAGTGTCATGGTGGCTCACATTAGCTTGCGCCTGTGTTACAATTAGTTTATACTGAGAAGCAAGGTCTAGTCAACTTGACTTGTCTGCCATCTTGGACCCATTTGGTTCTAATCAGTTTATGTTACGCCCTCTGGTTATGTCATTCTTTCAAAGCTTGTGCCCTGCCTGCTTCCCTCCTGTTTCACCCACGTAGTTAACTTCTTGTACTCTTCCTCTAGAGGCTATCTTGTTCATAGTTTGTTCAGATTACTGAATTAGAGACTAGAGAAGCAATCCAGTCACCTGCTGAAGTCTTCATTTCTCCTTTTTTGATCTGCAGAAATAACTAATATGGCAAGATATTGTGCGATTAAAATTTCGTAAGGTGTGCTTAGCCCAGGGATGGGTAAAGCATGGTTTCAAGGAAGGGATGTGTGTGCTGGTTCAAAACTTGTTTACAATTTAGCTTTGCTAAACTGACAAGAAAAGGAGCTTCCTGCTGAGGGCAGTTTCCTGCAAAGAGCTGCTTTCACACTGCCTCACACCAACAACAGCATCCAAAGGTCCTTATAGGACCCGCTAAACTGGTTTAAATAATCCTAAAGCCCCACAAAACTGGTTTAAATAATCCTCACAACCTAGGCTAGGGCGGGGAAACAGTACAGTTTTCTGATACGGTGGCCGAAAGATCCAGAATTTAACACCTCCTCAAAATGGCTACCAGGGAGTCCCATAATCATGAGTCAGACTACCAGGTCTGACTGTGATGAATACAGGTCTATGGCGGCCCAGGTCTCTCTGTGTTGTGACTGTCTTGGCGCCGCGATGACCAAGACGTATCATTCATACACTCTCCTTGGCGCGTGAGGCACCCTACACTTGGGAAGTTCAGCCCTGTATTCCCTGCAAGAAGGATGGACCTGCGCCCAGGCATCCGCCTCACTGCATCAACACGGGGACCTCGCCTTTGCCACAACCAAGATGGCTCCACCGCCCAGAGTCCCTCCCGCGCTCGGTCCCCGCCCGACTCCGACCTCCTCCATCACTCCGCCAACC TCONS_00144259 . 5' 98 TCONS_00144259 . 5' 98 EMBV3_32359 GACGCTGACTTTCTTCCTTTGAGCCTGCATCAGCTCCTGATTTTGCCCATCTACAGTGTG Gene GeneID:514613|MCM2:XM_002684963:238_cdna UTR3_Alt 2 NULL GeneID:514613 1 GENE MCM2 CCNL1 cyclin L1 EMBV3_36908 CTGGTCTTAGCTACAGTAAATTATGGTTGGACTTAATTCCTGTTCTGAGTACATGCAGTC Gene GeneID:504355|RPRD1A:NM_001075156:70_cdna Constitutive 2 NULL GeneID:504355 24 GENE RPRD1A MGC139907 P15RS Regulation of nuclear pre-mRNA domain containing 1A EMBV3_12186 AGCAGCTGGTATCACTGAATTCTTCCCTCAAGGAGCCCAGCAGTGACCATTCAGCTTGGA Gene GeneID:616745|PATL2:XM_002691093:224_cdna Constitutive 1 NULL GeneID:616745 10 GENE PATL2 NULL protein associated with topoisomerase II homolog 2 (yeast) EMBV3_34735 CATGTCGACAACAAATTCAGGAAAAGTCACAACCATTTGGAGTGGAAGCACTGAATACGG Gene BVV0102_432071 - 0 NULL GK000022.2:28823254-28847016 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28268 AAGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCTTGTACCTAGAGATTCCGCGGAAG Variant GeneID:616621|PNKP:NM_001083522:394_cdna 586^662 2 EMBV3_11137 GeneID:616621 18 GENE PNKP MGC143056 polynucleotide kinase 3'-phosphatase EMBV3_34457 TCCTACTGTAAACGGCTGTCCTCTCCGCAGTCGGGTTAGCGTCACATTAGTGCCTTTTGA Gene GeneID:510927|LOC510927:NM_001113250:8_cdna Constitutive 0 NULL GeneID:510927 24 GENE LOC510927 NULL hypothetical LOC510927 EMBV3_05704 CAACAGCGGAAGCTTCCCACCGTGTTTAAGGAGAATATGAAAGTATTACTCAGGCTTCTT Variant GeneID:515640|IL1R1:XM_002691178:72_cdna 163^262 1 EMBV3_16362 GeneID:515640 11 GENE IL1R1 NULL interleukin 1 receptor, type I EMBV3_37964 AGCCCAGACAGCCCAGAGCTCAACAAAGTGATTTCATGAACGTCTACTACCAGATCCGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09416 GATGAGCCTGCAGAGCGCGCAGTATCTCCGGCAGGCAGAAGTCCTGAAGGCTGACATGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36010 ATGAGCATCTGGGACGTGAGGAGCCTGGAGTCTGCCCTGAAGGACCTCAAGATTGTATGA Gene GeneID:326600|ARPC1B:NM_001014844:62_cdna Constitutive 0 NULL GeneID:326600 25 GENE ARPC1B NULL actin related protein 2/3 complex, subunit 1B, 41kDa EMBV3_33953 GCCTTCTGGTACTTCTTTAACCGTGAAGGAGTTAGGCGAGAGGGCACTCAAGGCACACCA Gene BVT0102_123226 + 1 EMBV3_13470 GK000002.2:131596963-131624284 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37758 GATTGGAAGTGTGTCATCTTTCCTCTTTGCCCTTCAGCTCCACGAACAAGGACTGCAGCC Gene BVT0102_377691 - 1 EMBV3_40219 GK000005.2:27115820-27171924 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42675 TGGCCACCTGTTTATGTCTTTCCGTGCTGTGTTAGCAAAATGGGGGCAGGATATCCCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13357 AGACAGGTCTCATCGGGAGGAAATGGAGGCAAGAAGACAACAAGACCCTAGTCCTGGTTC Gene GeneID:614678|CBFB:XM_002694812:671_cdna Constitutive 0 NULL GeneID:614678 18 GENE CBFB NULL core-binding factor, beta subunit EMBV3_09958 CGAATTCAGATCCCTCCTGAGTATTCGGCAACAGCACACCCATCCAGGAGCTTTTGGGAA Gene GeneID:100126047|NUDT6:NM_001105650:2_cdna Constitutive 3 NULL GeneID:100126047 17 GENE NUDT6 MGC157079 nudix (nucleoside diphosphate linked moiety X)-type motif 6 EMBV3_05947 ATTCGCTCTGAGTCTTTGCAGGGTGTTTCACCCATACCTGCAGTCCAACAGTGAGTGACT Gene BVV0102_055564 + 0 NULL GK000028.2:7295708-7442070 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33912 CTACCTGGCGAGGCATTTCCAAACCCTGTCTAGCAATATGCACACTCTTTCTTTACTGAG Gene GeneID:514134|DENND1A:XM_002691578:101_cdna Constitutive 0 NULL GeneID:514134 11 GENE DENND1A NULL DENN/MADD domain containing 1A EMBV3_03340 GTTACTGCAATCTGTGATTGCTTCATCTGTAAATCAAGTACAAGCCTTTATGTATTTGAC Gene GeneID:534440|INSIG2:XM_002685428:29_cdna Constitutive 1 NULL GeneID:534440 2 GENE INSIG2 NULL insulin induced gene 2 EMBV3_35712 GGGAGTGCTCAGATATTAGGGCCTGGCGTTTGGAATCATAGGAATTATCACCACGGAAAC Gene GeneID:534650|RSPO3:NM_001076034:56_cdna Constitutive 0 NULL GeneID:534650 9 GENE RSPO3 NULL R-spondin 3 homolog (Xenopus laevis) EMBV3_05021 GACAACACCCGGAGAGTGCCGCCATGTCAGCATGTGGACATCAGCAGACCCCTCAAAGCC Gene GeneID:407229|ADAM12:NM_001001156:15_cdna Constitutive 0 NULL GeneID:407229 26 GENE ADAM12 NULL ADAM metallopeptidase domain 12 EMBV3_07152 CCTGTGTACCCACCGCAGGCCCCGGGCCAGGTCATCAAGCCGACCTGTGCTCCCCCGATG Variant GeneID:519652|ADAM8:XM_002698475:521_cdna 246^296 1 EMBV3_40860 GeneID:519652 26 GENE ADAM8 NULL ADAM metallopeptidase domain 8 EMBV3_01357 AAAATTTCCCTCTTGCTGGATCTTGGTTGGCAGAGGGTGAACAGGAGACAGGGATGAGGG Gene GeneID:506692|NAALADL1:NM_001100308:524_cdna Constitutive 0 NULL GeneID:506692 29 GENE NAALADL1 NULL N-acetylated alpha-linked acidic dipeptidase-like 1 EMBV3_26202 CCAGATGGTCAGCTGCAGGCCTATAGAAAGGTTTATGTGGTCCAGGGCACATATGGTTAC Variant GeneID:617788|UFSP2:NM_001076477:82_cdna 751^897 2 EMBV3_37985 GeneID:617788 27 GENE UFSP2 MGC142326 UFM1-specific peptidase 2 EMBV3_32467 GAGGGACGGTATCACTGAACCGCAGCTATGCCACCAAAACCCTCAACAGAGGCATCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42019 GAGCTCCTGCTAAGCCAGCCTCAGATTTCTCCAGTTTATTCTGTGCGTCAATTTGTGTAA Gene BVV0102_047508 + 0 NULL GK000011.2:45699418-45780699 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012363 TCONS_00027763 2 XLOC_007848 XLOC_015327 Coding TCONS_00012363 XLOC_007848 Coding Coding AP3S1 10:4641988-4716785 = TSS9401 1111 3 TCONS_00012363_3 71 12 0.985306700893096 0.00215674832607382 0.00198263525106844 0.00177886594894956 0.00122349933157301 0.000907068851028314 0.000812509708652334 0.00154789759454474 0.00162854694457066 0.00182871438837224 0.000705499760230302 0.000605779614575065 0.000495638571740104 0.000215647929405618 0.000772708042461773 0.000388681251973328 0.00581036696975992 0.00467732428179384 0.00562403544782056 0.00257486151397327 0.00478433675519668 0.0020083636586721 0.00228198104855749 0.00199004933038986 0.00414315492329087 0.00231144597258555 0.0031705422957548 0.00279072736831755 0.00101152636818768 0.000606595457549041 0.000625099149097411 NM_001046416.1 AP3S1 Bos taurus adaptor-related protein complex 3, sigma 1 subunit (AP3S1), mRNA. 0.0 1707 98.68 0.881188118811881 NM_001284.2 AP3S1 Homo sapiens adaptor-related protein complex 3, sigma 1 subunit (AP3S1), mRNA. 0.0 1370 91.37 0.881188118811881 TCONS_00012363_3 sp|Q2YDH6|AP3S1_BOVIN AP3S1_BOVIN AP-3 complex subunit sigma-1; 3e-44 144 100.00 0.985915492957746 1 noncoding 0 0 0 0 0.107583811928661 0.440984939203421 -0.0574814636019372 0.267602412093279 GTCCGCCCGGCTCAGCCATGATCAAGGCGATCCTCATCTTTAACAACCACGGGAAGCCGCGGCTCTCCAAGTTCTACCAGCCCTATATCATCAAGGAAAGACTCCTGGAAGGCGGATTCTTAACCAGTGGATATATACATTATGCAACATTGTATTTTTTCTTCTGTGTATTCTTCAGAAAGTGGAGTTAGACATTTTAGTTCTCATTTAGGTATTTGTGGAAACACTAGACAAGTGTTTTGAAAACGTCTGTGAACTGGATTTAATTTTCCATGTAGACAAGGTTCACAATATTCTTGCAGAAATGGTGATGGGGGGAATGGTATTGGAGACCAACATGAATGAGATTGTTACACAAATTGACGCACAGAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAGCTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATATTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCTTTTAAATAAAAAATTAAAAAGGCCACTCCCAGGTAAAATCCAGGGGAAAAAGTCATCTAAGTTTACCATGCAGTTGTTTACCAAAAATAAAGGAGGAGAGTCTTAACTTTTACTCTTGGATTTAAGTCAAGGTACTGTATAGACATTATATAAAATCAGTGTGGAAGTTCAATGTTGCTTTTCTTGCTCAGTGGTTTTGAAGAAATTAAGTAGTTCCAGTGTGATTTTTTTTTCTTCATTTTTTAAACTGCATTCCTGTGGCCACCTAAGGCATGCCTGTATGTATTGGCTATTACAGTATTTCGAAAACTGTTCAGGACATTTCTTTAAATTGTGTACAACCCAAAATGTTGGTGTTTTGTATGGATCACAAGTGCAACATTCCTTAATAATTTCTGTTATTTGTCACAATTGTTATTTAAAGAACGAAGTATGTATTGCATGAAAACATTATGACCTATTTCTCTTAGTTTAAATAAACTCCAAGGTAACCGGACTTACAAAGCACTGTTCTGTTTGCCTGATATCTACTTTAGCAATAATTTTTTTTACGACCCTCTGACTCAACAAAAAAATAAAAGTATATTTTATCACTGTTAA EMBV3_41026 TCTGATGTCTCTAAAAAGCCTAATGCCCCCAAAACCAAGACTCGCCGCAAAAGGAAGGCG Gene GeneID:787696|TOP2A:XM_002696009:421_cdna Constitutive 0 NULL GeneID:787696 19 GENE TOP2A NULL topoisomerase (DNA) II alpha 170kDa EMBV3_11808 GGGTGGTCGGTGAGGGTGGGCAGATAAGAGTTGGGGGAAGGGAGTTTTGAGTTAATAGAA Gene GeneID:617465|BARX2:NM_001101266:11_cdna Constitutive 0 NULL GeneID:617465 29 GENE BARX2 NULL BARX homeobox 2 EMBV3_03837 ACCAGATGATCAGCCGCATTGAGTACATCCACTCCAAGAACTTCATCCACCGGGACGTCA Gene GeneID:407122|CSNK1D:XM_002687933:166_cdna Constitutive 0 NULL GeneID:407122 5 GENE CSNK1D NULL casein kinase 1, delta EMBV3_41578 AGAATTGTAAGGGTGGCTTGCTGCCAGGTTTCCACTGCCATTCTTGGGGGTGTAGCTCTT Gene GeneID:513771|GORASP2:NM_001038535:1_cdna Constitutive 0 NULL GeneID:513771 2 GENE GORASP2 MGC133704 golgi reassembly stacking protein 2, 55kDa EMBV3_19282 ACCATCAACGGCATGGTCTACCCTGTGCCGCCTGACTACTACATGCAGAGGTTTTCTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03504 TATAATTTCTGCGAAGTCCTGCCCGGGGAAAAGTGGGTAGTTGTAGGTTTGGGTTGCTCC Gene BVV0102_196732 + 0 NULL GK000010.2:20639715-20665545 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012965 1 XLOC_007961 NonCoding TCONS_00012965 XLOC_007961 NonCoding NonCoding - 10:20643643-20646109 - TSS9706 2387 1 TCONS_00012965_3 118 0.316715542521994 2 0.0324543610547667 0.000530092535548182 0.000265206972954154 0.000558264302548446 0.000160029582829563 0.000237861423050712 0.000230777497020825 9.28382835392859e-05 0.000170973822303995 0.000489207501340488 3.96453009785644e-05 9.59021273758374e-07 0 4.80818376569874e-06 6.89735623880502e-05 4.31630335985009e-05 0 0 0 0.000754044790152109 0.00125029154948761 0.00143201964059178 0 0 0 0.000307673868585644 0.000448644102429877 0.000466375027119325 9.65749354700736e-05 0 0 XR_226838.1 LOC101905010 PREDICTED: Bos taurus uncharacterized LOC101905010 (LOC101905010), 0.0 1977 100.00 0.458734813573523 0 noncoding 0 0 0 0 -1.47951371025611 0.0045713268623115 -0.0912753927269492 0.4032142291164 CGTGCGGAGCTGCCCCGGCGGCGAGCCCAGGACCGCGACGCCGGAGGGGCGGGGAGAAGAAGCCAGGCCGGCGGGGAGAGAAGAATGTTCCGAGGCCGAGAGGGGAGCTTCATCATGGAAATAAAGAAAGGAGAGACCCAAGGAGAGAGAGAGTGAGGAGCATCCTGAGACGGACTGCCAACCCGCACCTAAGAGGCTGACCGAGGGCCGTGGGAAGCCGAGGCAAGGCGGGAAGGGGTAGAGACCCTGCCCCTGCTCTAGCTCACCATCCCCGACACGCCGCCTACGCACCCCGCAGCCCCCCCGCCCCCTGCTCCGCAGCACTAGCAGACGTGCGCATTCTTTTCAAATGTCATATTTCCTTTGATCCTGGGCAGCGTTTCTCCATGTGTCTGGCTCAGCTCCCGCCCAGCCAGCCGCTCCCCCCGCCCTCACCCCACTCTGTGTATTTTCCTGAGGTCCCTCCCCCTCCTCCCAGCATCTGGAAGGCCCTGAGGACTGGCGTTGGCGCACATTCCCCTGGAGACTCTGGCCTCGCCTTCCAGTGACTCAATTTCCCCTCTGCGGGTGGGGGCCGGGAGGTGTGGTGCGGGCGGAGAAAAGAGTTGTTGCGCGTAAATGTGGTATGAACAAGCCTGCAGACTGCTCAGAGCGCTAGCTTTCCTCGTGGGGCAGAGGTGGGGGGGCTCCCCTCGACTCTGAAAACCCTCGGATCTGTCTGAACTGCAGCTAAGGGATGGAATTTATAATTTCTGCGAAGTCCTGCCCGGGGAAAAGTGGGTAGTTGTAGGTTTGGGTTGCTCCGCACATCTGCCCCCTGGCGACCACAAAGACCCAGCCGCCCTCCCTCCCGCGGGTCCGGTCTCTCGACCGCCCGACCTTGGTCCCCGATCCCCTAGCGCGCACATCTGAGCACAGCTCCTCTTTCTCACCTTGTATTCGTGGAGCGTTGACTTCCGCTCTCCACTTTCACAAGCGTGACTCAACGGCCTTGGAAGCGGACGTTTCTTGTTGTTTCTAAATTACACAAAATACAGTCTCCTTGTAAAGGATTCAAGCCATACAAAAATATATAGTAAGCTGTGATCCCCCACCATTTTGTCTAAGTTTATTAACCTGTATATGGTACATATGGCTGGGCTTCTCAGGTGGCTCAGTGATAAAGAATCCTCCTGTCAATGCAGGAGGCACAGGAGACCCCGGTTGTATCCCAAGGTTGGGAAGAAGGAGGAGGAAGTGACAACTCGCTCCAGTATTCTTGCCTGGAAAATCCCATGGACAGAGTTGCCTGGAGGGCTACAGACCCTGGGGTTCCAAAGAGTCAGACACAGCTTAGCGACTGAGCTTGCACACACGCATGCCTGCCCTTTTTGTGTATGTCAGACCATGTTGCAAGCATTTTTCTTGACTTGCTTTTTTTTTTCCCCTCAGTTAACAAATGACTTGGAGATCTTTTCCTGTCAGTACATGTACATCTGAAAATAGTAATAAAAACACTCCTCTTCATTTGAGATTGGTGAGAAAGCTAGGTCTGGAACCCAGGTTTTCTGGGTCCTTGTCCAGTGCTAATTCTACTATACCACATTTTATGTAGGAATCTGTCTCAGAGTGGCCTTCCCCCACCGCCGAAAATCAAACCCTTAAAAAAGAATGAGATGATGCAGGTAGGTTATTGTGGAGAGCAACCACAGGGGACAAAAATGGGGAACTGGGAAGAGTGAAATGGGAAAGCGGAAAAGCCATCCAAACAAGTGACGTGGAGCTGGTGGCCACCTCGAACAACTGGAACATTGTCCCAGCACTTTCTGTGGAGCCATACAGAATGTGATTCCAGAGACAGGATATTCGTCTACTCACCCTCACCCCCAGTGGTCAAAAGTTCCCCTTTAACTGTTAATTCCCTCACTCTTCCAGCTTTACACAAGTGTCAGAAAATGGTAGGTATTCCACAGTGCTGCAGCAAAGACGCCCCCGAGCAAGAGGCGTAAAAGATAGGAGCTATACCTGCAAGCTGGTACTCTCAGGTGACAGGGGCAAGCTATTGGTTGCCATAGTAATAGCTGGAGTAAAAAGATGGATGGAAGATGTGTCCTATCTAATCTTTAATTCACACAAAAAATATGTATTGAGGAACTTCTATGTTTAGAGGCATTTCTAGGCATTGGGTGCCTGTATTTATAGACCAAGCCTCCAAGAATTGTTGGGTATTATCAGGTTAGAGATACATTTCATACTTGACATCTCCTTCTTCCTTTCCCCCTAACTGTACAGAACTGTTTTATTCACAGAGTATCTATCTATCTGTACTTAACTTATCTATCTCCTTCCTTTGCATTCCCTTCATTGCCATTCCAGTGTAGACCTTGATTTTTTCTTAGACTCTCAAT TCONS_00016252 r 5' 1382 TCONS_00016252 r 5' 1382 EMBV3_02069 AAGCCTTTGTGCAAGGTGGGCTTGGCGTCCCTTTTGAAGCAGAGTGGCGTTTTCTTCTGA Gene BVV0101_007337 + 0 NULL GK000029.2:37011136-37098497 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165049 1 XLOC_100394 Coding TCONS_00165049 XLOC_100394 Coding Coding ZBTB44 29:36983235-37042537 j TSS123363 9162 1 TCONS_00165049_4 435 0.00785854616895874 6 0.84560125461628 0.000205845197133028 9.30516063420531e-05 6.74807072277005e-05 2.85496033221663e-05 1.21659537527668e-05 4.37438044667007e-05 4.42385926497398e-05 9.70235777707972e-43 2.81662560262683e-09 3.15882269844263e-31 5.35536662669518e-29 3.16228367463131e-24 1.27600034324386e-05 5.84075449289994e-25 8.06820672258842e-64 5.10186811591431e-24 9.5481049082473e-35 7.41929767297631e-53 0.000108626235197092 5.62945392585797e-05 1.89568672139207e-05 7.08851046516832e-136 1.89809803113711e-05 1.90252156257724e-05 0.000122933986129789 8.73595355372086e-05 6.57333212001726e-05 6.16596013985183e-36 1.49127791905752e-12 9.7701502330686e-16 XM_002699251.3 ZBTB44 PREDICTED: Bos taurus zinc finger and BTB domain containing 44 (ZBTB44), transcript variant X1, mRNA. 0.0 1.132e+04 99.14 0.691661209342938 NM_014155.4 ZBTB44 Homo sapiens zinc finger and BTB domain containing 44 (ZBTB44), 0.0 3126 85.44 0.285527177472168 TCONS_00165049_4 sp|Q8NCP5|ZBT44_HUMAN ZBT44_HUMAN Zinc finger and BTB domain-containing protein 44; 0.0 843 92.89 0.990804597701149 4 coding 0 0 1 1 0.0485016920794084 0.721857564828813 0.020638346923386 0.699056765667165 AGTAAAACTGACAATTGTAATAACAATTGTTGTGAGGATTAAACATTACATATACTTGAAAATCTGCTGGAAACCGCAAAAGACTATAAAGTTAGACGTTGTTTTCTGGCTTTTATTTCTAAAGTATATTTCAGTGGTTGGAATGGGTGGGTACCAGGGTGCTGTTCTCTCAGGGAGATTAATGCCAGGCGTCGCCAAGCGTTTCAGAAGGAAACGCCACTCTGCTTCAAAAGGGACGTCAAGCCCACCTTGCACAAAGGCTTTTGGTGGTCTTTCGGTGCAAGAGCTGGGGGCGTGGGAACACCATGTATGCAGATGCGGGGCGCCTCGGGAGTCGCAAGCCGCACCCTCTCCGCCCCCGCGCAGGCCTCCGCTCGCCCGGGGCGCGCTTCTTCCCACAGCCCCGGGCGCCCTTCCTCCCCGGCCGCCTGGGGACGATAAGGCATGGGGTCTCGGGAGCTCTAATCCTGGGCGCGATTCTGCAGGTGACGGAGAACTCTCAAGGCCCCGGCAGAACTGATCACTTCGGGGCGTCCGGAACACGCCCTCGTCGGAAAGTCAGGACATTTCTGATTCATTTGCATCCTTGAAGAGCATCTATAGAAGAGGAAGGGAAAGATGGGTGTGAAAACATTTACTCATAGCTCCTCTTCCCACAGCCAGGAAATGCTTGGAAAGCTAAATATGCTTCGAAATGATGGACATTTTTGTGATATCACTATTCGTGTCCAGGACAAAATCTTCCGGGCACATAAGGTGGTATTAGCAGCTTGCAGTGATTTCTTTCGCACCAAACTTGTAGGCCAAGCAGAAGATGAGAACAAGAATGTGTTGGATTTGCATCATGTTACAGTGACTGGCTTTATACCCCTTTTAGAGTATGCGTACACAGCTACTCTGTCAATTAACACAGAAAATATCATTGATGTTCTAGCTGCAGCCAGCTATATGCAAATGTTCAGTGTTGCTAGCACCTGCTCAGAGTTCATGAAATCAAGCATTTTATGGAATACACCCAACAGCCAACCAGAAAAGGGTCTGGATGCTGGACAAGAAAATAACTCTAACTGCAATTTTACGTCTCGAGATGGAAGCATTTCTCCAGTGTCTTCAGAGTGCAGTGTGGTAGAAAGAACCATCCCTGTCTGCCGAGAATCACGGAGAAAGCGCAAAAGCTACATTGTTATGTCTCCTGAAAGTCCTGTAAAGTGCAGCACACAAACAAGTTCTCCCCAGGCGTTGAATTCTTCAACTTCCTATTCAGAAAATAGAAATCAACCAGTTGACTCTTCTCTAGCTTTTCCCTGGACTTTTCCTTTTGGAATTGATCGAAGGAATCAGCCTGATAAGGTTAAGCAAGCAGAAAATACCCGGACTTTAGAATTACCTGGCCCATCTGAGACAGGGAGAAGAATGACTGATTATGTGACTTGCGAGAGCACAAAAACTGCCTTGCCTCTGGGTGCCGAGGAAGATGTCCGGGTCAAAGTGGAAAGGCTAAGTGACGAGGAGGTCCATGAGGAAGTATCCCAGCCTGTCAGTGCGTCTCAGAGTTCACTGAGTGATCAGCAGACAGTGCCAGGAAGTGAGCAAGTGCAAGAGGACCTTCTGATTAGTCCCCAGTCTTCCTCCATAGGCTCAGTAGATGAAGGCATCACGGAGGGATTGCCTACGCTTCAGGGCACTTCTAGCACCAGCGCTCACGTAGATGATGATGATCGCACAGAACGGCCAAGTCCCAATGGTCCAGATAGACCTTTTCAGTGTCCAACGTGTGGGGTGCGATTCACCCGTATTCAGAACCTGAAGCAGCACATGCTGATCCACTCAGGAATTAAACCATTTCAGTGTGACCGCTGTGGGAAAAAGTTCACCAGGGCTTACTCGCTAAAGATGCATCGCCTAAAGCATGAAGTGATTTCCTAGTACCGGACTACTTAAACCAGGAGCAAGAAGAGACCCTTGTTCAATATGATCTTGGAGAACACAGTTTTGAAAGCAACTCTTCTGTTCAAATGCCTGTAATTTCACAGGTCTCCTCGACCCAGAATTGTGAAAGCACTTTTCCCTTGGGGTCTCTTGGGCTGACAGAAAAGGAGGAAGAAATGCCAGAGCAGCCAAAGACCAGTGCTTGTGCCGAGGCAACCAGAGATGACCCCCCAAAATCAGAGCTGTCTTCTATAACTATTGAGTAATTTCATAGTTTGGCTTCATTTTTAATTTTTGGAAAGTGCCTGTGCTTGGTCTTGTACATTTGAATTTAATTTTTTAAGCAAAAAAAAAGGGTTTGGAAAAATCTCCCTTTTTACTTTGTAAGTCCTGCAACTGATGTTTTACTTTTCGTGACTGAGAGATTGCTTCTGTATGTGCACAGTAACATGGTGTTGAAATACAGTAGAAACCCTGAAACTTAAGGAGAGGAAGCAGTTGACGTCACACTTATATCAGTTTCCTCTTCATCATCAGGAGTAGGCTAACAACATACCATTAGGTTGAGAAGAAATCAGATGATTACTGACCTTCCTGAAATGAAAGGGTACACCAGAAACATACTACTAAACAAATTTGGCAAATGGCCTGAATAGATGTTACTCCTATACACAGGACCTTGTACAATCTTCTGTAAAGCCTGTTGTTTCTGGAAATATTTATGGTGAGCTTTCTTAAAAATTATTAGGGTGTGTACTTCTGAAATTCCACGTATTCTTTTTTTTTTTTTTAAGCTTTGTCATTATGATTTTTTATGGTGAAAGTTTGGTATTGGGATAGGTATTCCCTGTACCTTTATAATAGTACTCTCCAAATTATCTTTCTTCTATGAAAGACGGCAGAGAGCCACAGTTGAGAAGAGTCAAGCTGTGCATGAAGAGACCAGGAATGGGGAATATAGTGTGTGAATCTCAGCTTCATAGGAACTCTCATACTGCTTTTCTGGTTAAAATCATTGTTTACCTGGTCTTTGAATGTTAATGCCTGGCTAATGAGGTCATTGCCTAGATCAGTTTATTCTTACCCTGTCAACAGTACTTTCTTTTGCCTATACTTGGCGTGATCCCATAAAAAGGAAATATACTGGAGATGTTCTATATTTTATATATAGGTTTGTGTATTATTGAGGATGTTTTCATTTTGCTGTTTGGACAAAATAAAGAATTCTCTGTTAAGGCTATGTTCTTAACCCAACTAAGATTGTTTACAAAATACCATGTGACAGTGATATATTGTCCTTATTCCAAAATATTTTTAGACATTGCCAAATGTCATATTGAAAGCAGTTAGTATAGTTTTTACAGAATGTAAGCAATAATGTAGAAGAGAAGAGGCTATAAAATGATGATCTGTGACTCAGATCTATTTGGGGGAAAAAATTGTTAAGACTAAAGAAAAACTAAAAACCTTAAGGTAATGAATATTACCTCTTGCTGCTAAAAGAAAATGAAACTTCCTGGTTTATAGTTGAAATACATATGATACTTTAGACTGGAGTATATATTTTACCTGGTGCCGTTAAAGCATCGCTTACCTTGATCCTAAATTTCATGAGTCCATGAACAATGATCTTTTGAGTAACTTTTTTTTCTATGTATATACCCAGAGTTTAATCATTATGAAAACACCTGATTTAGATTAGAAAAAGAAAATACAGTTTCTTATTCAGAACACAAGATCTCAGTTTTGTCTGGGTGCTAGACCTCAATAAAAATTTTTTAAGTTATAGTGATTTGTTTCATTTTTTGATTGGCTCATTCAGTAACTTATCTCTTACAAATGTAAAGAAAGGGAAAGTGAACTCCTTGAAGTTTTTTTTAGGCTAATGTTCTTTTTGTTTTCATATTCTGCTGTTTTTAACTTGTTTCCAAGTCCTTTTCTCACTCAAGAACCTATTGTTTCCTTTTTGCTCCCCAAATAGCTATAGTACCTTAAGGAAAATGAACACATACAGATTATGATTGCCCTCCATCATTTATGCGTCTTTATCAGTAGGTTGAATTACTTTTCTTCAGCAAGACTATATGATACTAATAGCGGTACTGCTGTGTCTCAACTGGAAAGGTCAGGAATTTTTATTTTTAATATTATATAGATTCTTTGGAAACTGTTATGCCTACCAATAGATAAATCTCAAGGTTAATTTTAAAATCTTATATGGACAAGACAAGAGTAAGTGAAATTATCACCAGGAGTCATTGTTGCCCTCAGTTCTAAGAGTTATTTTTTTTAGAATAAGGAAGGAAGAAAAGAAGGAAAGAAAATAGACTTGATGAGAAGATACATCAGAACTTGGAGATTTGTTGATTGAAAGTAATTTAGCATACCCCCTGTCCTGAGAATTGTGTACTGAGAGTCCTGCACAGTTTTGCCCGTTCTGAGGTGTTCTGTGTTCTCAGAATGTAGGATTACCATCACTGGCTATTTTTTCCCAAATGGAAACTTTAGACTTTCATTGGTAATTACAAATTATACGGATTTCCAAGTTTTATGAGACATTTGGACCTACTGTGAAAATGCTTATTGCTGGTTGTCTGTTCCCCACATCTTACCAATACAGGTAACTAATACTTCACATGTGATATAAACAAAGGCCTTTTTTTTCTATTTCAGTGAGGCTCTACATTTTCTTGATACATAGTTTAAGGTTACTTAGCTTATGGGCCTGTTTTAAGAAACTAAGCTGCAAGAAAATAATTGTATATAGTGTGACTTAGATTTATTTAAAATTCATCTAAGAGAAGGATGCCTGGATGTATAATTTTTACCAGAATATATGGAGAAAAAAATACAAAGAGATGAAAACCTGTTACATTGTCTCATCATCAGAAATTACCAGTATAATTGAACATTAAAAAAATTCCAGTTTAGCATAGCATAGCAAAGTAATTAACCTCCAATTAAAATAAATAAATTTATATTTTAAAAAAATAAAAAATAATAAAAATGAATACCGTAGCTATCTTGCTTAAATTAGGCCCCATGAGGTAACTTTGTGATATTTAAAGGGCTTAAATTTTAGGATGCAAGATAAATTGCCTTTTTAAACCAAGGATTTTATATAATAAAAACATTTATTTTCATTTTAAAGCTACCAAATAGGTATGCTATACATACTTCACAGATGAGCAGAGATGTGTGCTCTGGTACTGGGTGTTTGAGCACCTGCAGGCATCCTTTCCACTTTATAAGGCTGTGTTCTAACAGTGAAAGCACTTGGCATGTTAGTGATTGCACTAATTCACAAACAAAAATTTAGTGCTCATTTTTTTTTTTTAAGTTTTCAAGAAAGGGATGCAGATGGAGGTTATCACCCACAAATATATTTAAATGAGTGTTTCTTATTTTGAAAGTAATCTTTAAGTAATTAGCTATCTATTTCATTACATTACCAGTTTTTTAAAGTTCTCAATTTCAGTGAGATAAAGTGTACTAAAATGTTTAAATAGCCTCATTTGTTCTTACATTCTGGCTTACAGAACTTTACATTCTGGTTCCTTGTTATGACACATGCCCTTAGGTTTTAAAAACAAACAAACAAAAAACCCTTCTGTTTTGTTAAAATATGTTACCAAGTGGAAAGAATTATGCAGCACATCTAATGTACTTACTGTTGGTAACTCTGTTACCTTCTGACTACTGAGCCAGCCTCTCCTGATGTATAAATGGTTCCCTGGGGGAGCCTTTGGAAGCCGTATTAACTCTTTCGGTTTTATTTTACCTCTTACTAATTTTTATTCTCATACTTAATCTAAATAGAGGACATTTATCTAGTTCAGTGGCTTTTATTTTGAAGATTCTCAGATCACGGTTTGATTTCTTTCAGCTTTGTAGCCCCTGAGAAATACATTACCTTATAATGTAATGGCAGTGTATGCTAGAATAACCACGTGGAGAGAATTACTACTTGATGAATGAACAATCCTAAAATTATAACTGAAAGGACTTTGAGATTTAAGGAATTGATGAAGAGAACTAGCAAAAATGTGAAGTCATAGCTTTGGAGTATACATCCTAGTGAGGGAGAGTAGTTTTCTAGTTATTAGTATTAATTGGGAGGGGAAAAAATGAGAAAAATTCACATCAGGAAGTGACCCAAAGTTGCTGAAAGATAGTAAATGCTGTTTTCAGTGTAAGTTATTGACAGAAGATGATTTAATTTAGATTTTGAGAGTTAATGAGAGAAGCATATATACAAACTTGATTTTCTGAATCAGAACAGAATGGTGGATGGGTGCTCAATTAGAGTAACCATGTCTATGCGGAATATTAAAGCTAAGCATACGCCTACAGGCATTAGGCGCAGATCATCCAAATTTAAGTTATTCTTCATTTTGTCTATACCCATTTTTATCTTTGTGTCATTTTTGCCTGACAGAATGTTGGTGACATAGGGTATTTTTATTTGGAAAGTCCTCAGCAAGTCTAATTGCCAAAGCAATAATGGTTCACATTAACTATGAAGTGGAATTAATATCCAGGTTCAACTAAGGAGTGGACATACTATGGCTATTTCATTTTTAGATTATAAACATGTTGAGATTTATTAATGGGGAATTAAGCCTATGTCAGATTATGGGATGACTCTTCATGACATTATAGTTGTACTTTAACTTCATACTCAACTAATACACTTCGATATTTATACTACATCATAGTGATTATATTTTTATGATAAAAAAGCAAAAGTTCCATATCTTTACGGATGGTCTCTGCAGAGATGTCAGGCGATGGCGGTGGTAGCATCTCAATTGACAGTATCTGAAAAATGAGACTGCCTTAAAATGTACATGCTACAGAGCTCACTCTGCATATGGTCCAGGCCAGTTCCAACTAACATCAAGGTTTTTATGTACATAATAGTTTACAAAGAATTTAAAGGTTTGGACTATTGGTTGAAAACAAAAACTTAAAAAAAAAAAATTTTTTTTAACTTAAAACTTTTAAATTTCAGTTTGAAGTGCCTCGTTTATAAAAATCAGATTCTTTGATTATTGCCTTTCTCTTTTAAACTGACTTTTTGCTGATTAAACTAAAGCCCTAGGCTCAATCGTGATGATTTATGGATAAAATTGCTGCTTGATGGTGTGAGGGCCTGTCAAGATTTTATTAAATTGTCCTTGTTTTTCCAAATACCAGTCTAACCAAATCCAAATTTCATCATTCAGGTAAGCAGGTTAAAAAATCGTCCTGTGAATGAATGTTCAGATTACCAAAGTACATAGTCTGCTGAGGAAAGGTCAGTTTTCCCTAAATTAATTGTATTCATGGAGGTTGTGTTCAGTTAAAGATGGGCAGCCTTTCGTGCCATTCCTAGAAACACCTGTTTTTCCTAGAAATACTTTTTTTTGTATTTTCTGTAAGAGCTTTCTCTTATTTCAACCATCAGTTTAATTTTCAGGTTGACAAATGCCATGTAAAGTGTCTCATACTGAGAGTGGCCCATTGAGTTATTGAAAGTCACACTGCTGTTCATCGTTCAGGTACCTGAAGTGAATGCCATCAGCTGAATCAGGAGTAAGATTAGTCATTTTCTTCCTTATACAAAGTAATGGCTTCTCGTGCTTATATTTCAAGATATTTTTTAAAAAGACCACAGCCCCTACTAGAGTACAATTTGATCTCAGTTCATGTCCCAATAATATGTTTGATGTTTCTCTTGTTGCTGGTGCCTCCTTTTGCATCAGATAGAGATTGCCTGCCTCTTTGTAGGGCACCCTTGTGGCACCTTATGTCCAGTTGGAAGATGGCGTATGGCTTCGTTTTGTGCCTCTGCTATCTTCTCAAAAGCCATTTTATAAAAATCCTAGGTAGCCTATTTTAATATTTAAATATATATATATTTGTGAGAGATACTTTTAGAACAGACTTTTTTTTACTTTAAAATTCCTGTATTCCCATTTTTAAGAGTAAATTTAAATTTTCCAGGATTTGAACTTTTTCCACAGCAGCATAATGAAAAAGTCAATTTGAGATAATAGAATGTAATTCAGTGATAAAAGAGATTGATGTCTGGTTATAGGAAACAGAAGGGAAGGGGGAAAAAGTTGTTTTGATGTAACAAACGAATTTTTAATAAAAATGTTTTTGTTTTCTGTAATTTTGTATTTACTGCTACAGTAGCTCAATATTTTACAGAGCTGACATATAGATCTGGCTCCATTCAGAAACTGGAGTACTTTCTAGTACAACCAACTGAGGAGGAAGGTGTGTACCACAGTCTTCCAGAAAGGTGACTGGCGGCCCTGTTTAGCTGATGCATGCTTTAAAATGCGCCTGTAGCCCAACATCAAGGAAGTGTGGGAGAAACGTTTATCTTGCTAGTTAATAGCATTATGATTCTTTTGGGGCCCTGGCATTTTGTGAAACCCTTGAGGGAGGGAAGGTGATGCTGGAGAAGAAATGTGAATTAAATTTTGTAGAAGGATGTTTTCATGCTTCTGTCCTCTCCTAGAACCAGAACAGCTTTTGTATCTGTGCCAGGCTCTAGTTCACCAGCTATGTATCCAGTCATCATCTCATTCACATTTGGCTTCACTTGGTGACAGTGGCCATAGCTAAGTTATTTGGCATGTTTGACTTTCAACAGTAACAAAAATGGTTTTGGATTTTATTTCCTAAAAATGTATACGATGTCGAAACTTTACATTTTATATACTAGTATCTGGCTATTAGTATTTTACAGGAACCATAGTTCTTGGTGACTACATATATATATATATATATATTTTTGTGACTTTTTTGTATACTAAGTGCCGTTTCAATGTTACAATCATTTTTAGAGTTATTGTAATCAATGTGAATATCATGTTTTTTCAAATCTGTTCTGAGCCTATAGTGTTTGCTTTGTGAATATATATGTGTATTGTATATATTCTGTATAGTTACATTGTACTGAAATATTAGCTTGTTTGATATAAGGAAAGTATGTATTGAGTACTTTTTGCTAGTTTGGTTGTTTAATCTTTTTTAAAAAGGTTTAATCTTTTTAAAAAGCAAAAACTTTAAACTGGCCTTTATTACATGGTCACAAATAAAGTTGCAGTTAGAAGGGATGGGCAGGGAAAAAGATAGTTTTGGGTGTCTTTGAATAGAAACAAGACTAAGTTTTTAAGTTTTGTTTGGTTCCCTTCCCCCCTTCATTAAAATATCTTATTAATGCTTTATGGAGTA EMBV3_27300 GTTAAGCTCCTTCGCCGCTCTTAGCGCCTCCAGCTCCTCTTCTGTGAAGAAAGCCAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35044 CCTCCAAATCTCTTGCTTGTCATTGACTCTTGCGTGTCAATTTCCCTCAGGTTCTATTTT Gene GeneID:509695|INTS6:XM_002691744:247_cdna Constitutive 1 NULL GeneID:509695 12 GENE INTS6 NULL integrator complex subunit 6 EMBV3_21027 CATGAGAGGCTTAAAGAGAAGCCCCCACCTAGAAGATGAAACCAAAGAGCTGCAGAAGCG Gene GeneID:281387|PENK:NM_174141:11_cdna Constitutive 0 NULL GeneID:281387 14 GENE PENK MGC134476 proenkephalin EMBV3_00800 TAATGAAATCAAGATGGGAGAGGCTCGGGCACAGGACTGAGATGGTGAAGAGATCCAGTG Gene GeneID:513326|RNF20:NM_001081587:5_cdna Constitutive 0 NULL GeneID:513326 8 GENE RNF20 MGC142883 ring finger protein 20 EMBV3_33288 TCAGGACGCTGATGGAGAAGGAGCCTGAAAAATACGAGGAGCTTCTGCAGGTGATCAAGA Gene GeneID:504771|COQ7:NM_001014849:308_cdna Constitutive 1 NULL GeneID:504771 25 GENE COQ7 MGC133656 coenzyme Q7 homolog, ubiquinone (yeast) EMBV3_29181 GGGACTCGGCCGCCTCTTCCAATGCTCAGTTTGGTCAACCTTCAGAATACAGTACACCAA Gene GeneID:767993|SPINK2:NM_001114858:146_cdna Constitutive 0 NULL GeneID:767993 6 GENE SPINK2 MGC133470 serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) EMBV3_27375 GGGACAAGGATTGAAAAGCATTCTAGTGCGACAGGCTCTTTGACCCCCATTCCTGTTTCC Gene GeneID:508331|RAB11FIP4:XM_002695661:136_cdna Constitutive 0 NULL GeneID:508331 19 GENE RAB11FIP4 NULL RAB11 family interacting protein 4 (class II) EMBV3_10460 CCTTAGGGATAAAGGTGCTCACAAAACCATTGGAAGTGCTGTAGCGTCAGGAGTCAGTGG Gene BVT0102_126943 + 0 NULL GK000030.2:39044055-39064088 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250376 1 XLOC_153319 NonCoding TCONS_00250376 XLOC_153319 NonCoding NonCoding - X:39060856-39063949 - TSS187597 3093 5 TCONS_00250376_3 87 0.662140316844488 1 0 0.00220361232702048 0.000742668689137105 0.000760943381065781 0.000702080205236609 0.000678402993385257 0.000625319844540683 0.000723700326671108 0.000861122886801063 0.00078510570820796 0.000474403704470224 0.000186232380124106 9.08963940654482e-05 5.82113566191745e-05 0.000385789672588395 0.000327238607511503 1.16874296189451e-05 3.39495010551941e-06 0 0.00119701060937602 0.000991512725654274 0.000466858799615885 1.03964484499565e-05 5.76735934143657e-07 0 0.000950901971175135 0.00101813516095762 0.000890715676025981 2.01854768657922e-05 8.99874196573116e-06 4.77540942258536e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 3e-171 607 86.44 0.164241836404785 0 noncoding 0 0 0 0 -0.320840228841775 0.0561795222115623 -0.00689158686503875 0.92530323512686 ATCTCTGCTTTTTAATACACTGTCTAGGTTTGTCATAGCTTTTCCTCCAAGGAGCAAGTGTCTTATAAATTCATGGCTGCAATCACCATCCCCAGTGATTTTGGAGCCCAAGAAAATAAAGTCTGTTACTGTTTCCAATTTCCCCCCATCTATTTGCCATGAAGTGATGGGACCAAATGTCATGACCTTCGCTTTTTGAATGTTGAGTTTTAAGCCAGCTTTTTCACTCTCCTCCTTCACTTTCAGCAAGAGGCTCTTCAGTTCCTCTTCACTTTCTGCCATAAGGGTGGCATCCTTTGCATATCTGAGGTTATTGATATTTCTCTGGGCAATCTTGATTCCAGCTTGTGTTTCATCCAGTCCGGCATTTTGCATGATGTACTTTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGACTTGATGTACTTCTTTTCCAATTTGGAACCAGTCTGTTGTTCCATGTAAGGTTCTAACTGTTGCTTCTTGTCATGCATACAGGTTTCTTAGGGTGTTATCACCTGGAAATAGTGTCACTGTTCGCCCATGGGATTGAGAAGGATTATGACTTGAATCTAAGGGATCCTCTGGGGTACCTCTGACTCCTGCCACATCCAGGCAGACCATGAAGGCTTCAGGCTCAGCAGGAAGAAAGATTTGAGCCACTTACCAGATAACGGATTCTGACCAGCTGAAGTTGGAGAGCAAACGGAAGACAGGGAGGGTAGTGAAGAAGGAACTTAAAAAGACCAAGGATGGTCTCAAGATCAGTTACAGAAAGGAGAATGGTAGTAGCTGTTGGATGGTGAAAAGTTGTTGCTGAACAAAAAGATGCTGGGATTCTTGGCCTCCGGAGAATTCAATCCGGGGCCAGAGATGAGGCTTGATCGCTCAGAGCTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATATAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCCCTGCTAGTCTTCAGCTGGATGTTATATAGTCACTAGCAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAACTCAGAATGGCACCAGGCCCCTCATCCATAATATGCATTTTGGGATAATCGTGGCACCAGATGATTCATCCCAGGCCATAAAATGATTGACCTGAATCTTGTAGAAGGGCAGATTACCATACAAATAGTTTCGTTTACATAGATTAGGGGAACAATGTCTGAGTATAACATACTGGTTTGTCAAGTAGTTTCTGAGCCATTAGGCAGAACCGACTTGAAGACAGAGTCTGGGGTAAATGAATAGAACATTAACATAGCTTAAGACAAACATTTCCATAAGAAAAATGCATTGGTTAACTCAAGGTTTGAGAATAGTTAAGTTCAGGTGGAACCAGGTGTCATTATGGCAACACAGTATTTTAAGAGAAACCTCCTTTTAAATTTGTATAGAGAAGGAAAAAAATATCGCTAGTTTGTTTCCTCCTGCGGCTTAAGAGATAAAAATGTCTGACACTTGCAGCCTATTTCCTCCTTTTGGAGACCCCTGGCCTTCCTGCTTGTTACCCTCTCAACGGGAGGGACACATCAACTTTCCAATTTTCTTTACTGATTTTATGGATGTCAAAGAAAGGTTGATTGAGGTTAACTTTAAGTTTTCCTTTAGGTTTGAGACTGTTGAGGTGAGATGGTATGTGAACCAGAAGACAAATCAATATTCCCTAGAGATGGCTATAGTGACTTATGGGCATTGTGGTCTCCTGTTTTAGGGAGTGCTGTTTTGTTTGTATGAGGAATAGTATAGCAGCCTTAACTTTGCCAGAAACCAGTGGTTGTTGCTAGGGTGTTTGTATTGATACTGGCTAGCAAGGGGGTTTAGTACAGTGGATAGTTGGTTTTCTCTTAGCTGCCACTGACTCCTGACGCTACAGCACTTCCAATGGTTTTGTGAGCACCTTTATCCCTAAGGGCTTCCCTGGTGGCTCAGATGGTAAATTTGGGAGACCTGGGTTCAGTCCCTGGGTTGGGAAGATCCCCTGGAGAAGGCAATGGCCACCCATTCCAGTACTCTTGCTTAGAAAATTCCACGGATGGAGGAGTCTGGTGGGCTACAGTCCATGGGGTCGCAAAGAGTCGGACAAGACTGAGGGACTTCACTTTCTTTTGCTCCCTGAATTAAATCCCTTTCTGCTTGAAACCCCTAGAGCAAACTCTGTTCCCCACAATGAATCCTGACTGATTATAGAACAACACATGAACATCAATGTACAAGAATCATTGCTCTCTGGAAGGACATGGTAGGAGGCTGAGAAGTCTTTTTGTCAATCAACAAAATGATGTGACCTTTGTTGCTTCCAACTGTCCCTTCCGAGGGAGAGGCATCACACGGGTTAGAACTCTGGGTGCTGATCTGAACTTTGCTATTCGTGCTTTTGTGTTTACCAAGTGTGTTCACCAAGGGCAGAGTGTCCGTTGAAGAGCATACAGCCAGGCCTGGCTGAGTCTCAGTTCCTCCGTTGGATGACTTTGGCAGGAGATGTCTCCCTGTGGCTGAGTTTACTCACCTGCACGATTGAGACTGTGTAATAGGGGGTGTGGATCTAGGGAGCTAGCCCCCTGTCCAGCGTTTGGCATAGTTACGGGGCCCCGCAGGACTCGGCAAGTGTCGTGTGGGTGGCTGTTGTTTACCGGCCTCAGTCCCCGGCTGCATTGTCTTTCTGGGATCCATCTTTTCAAGTCTGCAAACAGCCCTTGCCCGTGTGAACCTTTCGACTGGGGAGGACTTGGGTTCTGTCCTGCCGCCGGAGTCTGCAATCTTTGGGGGAGGGCTCCAGCAGCAGCAGTCCTTGGCGAACCAGGGGAAGCGGGAAGTCACGGGGCGCTTAGGCTGCGTCCATGAGCTTTGACTCCGCAGGTGCGGGTGTAGATTTCGCCTCTTGCGACTCCGAGGCCGAGGCCGGAGGCCCGGAGACCAGCCCTTCTGACGCGGCCGATCGGGGTGGGAGGGGAGGACCGGGGGCGAGATTAGCGGCGGGGGGACCCGCTCCGGCCCGCCGGGCTGGGCTGCCTGGAGCCGGGGGGTGGCGCCCGCCCCCCGG TCONS_00244196 . 5' 140 TCONS_00244196 . 5' 140 EMBV3_16794 GGGAAGAGCCCCCAGGCTCACACGTTCTTTCTGCTGCACCTGTTGGATATTCAGTGTTTT Gene GeneID:100295623|LOC100295623:XM_002695462:140_cdna Constitutive 0 NULL GeneID:100295623 18 GENE LOC100295623 NULL similar to vomeronasal 1 receptor, D9 EMBV3_26887 GGGCCCTTGTAAGAGAGAGGCGACAGTCCATGGGGTCACAAAAGAGTTGGATATGAGTTG Gene BVT0102_031894 + 1 EMBV3_08124 GK000014.2:29793701-29830348 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24793 TCGGTCACTTGCCGCTTCGGCTCTGAACACGTCTGCCAGGAGCTTTGACACATGTAAGAA Gene BVT0102_057170 - 0 NULL GK000028.2:41924803-41941736 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160773 1 XLOC_097744 Coding TCONS_00160773 XLOC_097744 Coding Coding GLUD1 28:41940417-41979827 = TSS120148 3306 1 TCONS_00160773_4 561 13 0.916440407013626 0.0103462494812449 0.0120575105778368 0.00901887705631128 0.00737476339704443 0.00738486593931724 0.00374314206730748 0.00675250854408587 0.00609899331946165 0.0106967817406241 0.00315245047008723 0.00122075852890518 0.00081010087501364 0.00211073789210336 0.00408220649965298 0.00332207321387657 0.124644374213932 0.0845256379434737 0.0894425201984733 0.0102791937464889 0.0133648329989369 0.00595391807461681 0.0450639094966626 0.0442260656202594 0.0507146649782737 0.012660282824685 0.0103987762423517 0.00659464670414605 0.00778641653061628 0.00384139346153308 0.0116125831740895 NM_182652.1 GLUD1 Bos taurus glutamate dehydrogenase 1 (GLUD1), mRNA. 0.0 2807 96.80 0.510586811857229 NM_005271.3 GLUD1 Homo sapiens glutamate dehydrogenase 1 (GLUD1), mRNA. 0.0 3575 84.41 0.985178463399879 TCONS_00160773_4 sp|P00366|DHE3_BOVIN DHE3_BOVIN Glutamate dehydrogenase 1, mitochondrial; 0.0 1129 97.33 0.998217468805704 2 coding 0 0 0 0 0.0334711715952506 0.821455349269786 -0.0451606178672941 0.462198382677857 GCCCCCGAGCGTCCCCGCCGGCTCACGCCGCCGCCGGGGAGGCCGGGCGAGGCCGCGGCGGAGGCGGAGGCCCGGCTCCCTGGGCGGTGCGCGCCCCCCGCCCTGCCACTCACCAGCGACATTGGCCCGTGGCACCCAAAGTCCGTCCTCCGCGTTAGGCGGCTAGCGCCGGAGGGGAGGGGATAGCCAGGAAGGCAGGAAGCTGTGGCTTAAAAGGGCAGCCCGCGCCGGGCCCTTCCTCCCTCCGTCCGTCTCCGGGCCTGTGAGAGCGCCTCTCCTCCGTGGCCTCCGTCCCGCCGCCATGTACCGATGCCTGGGTGAAGCGCTGCTGCTGTCCCGCATCGGGCCCGCCGCCCTGGGTTCCGTGGCTGCCGACTCGGCCGTGCTGCTGGGCCGGGCCCGCGGGCAGGCTGCCGCAGCCGTCGCCGCCCCGCAGCCGGGGCTTGTGCCACCCGCTCGGCGACACTACAGCGAGGCGGCGGCCGACCGCGAGGACGACCCCAACTTCTTCAAGATGGTGGAGGGCTTCTTTGACCGCGGTGCCAGCATCGTGGAGGACAAGCTGGTGGAGGACCTCAAGACCCGGGAGACCGAGGAGCAGAAGCGGAACCGGGTGCGTGGCATCCTGCGGATCATCAAGCCCTGCAACCATGTGCTGAGCCTGTCCTTCCCCATCCGGCGCGACGACGGCTCCTGGGAAGTCATCGAGGGCTACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGATGTGAGTGTAGATGAAGTAAAAGCTCTGGCTTCTCTGATGACATATAAGTGTGCAGTGGTTGATGTGCCATTTGGGGGTGCCAAAGCTGGTGTGAAGATCAATCCCAAGAACTACACTGATAATGAATTGGAAAAGATCACAAGGAGGTTCACCATGGAGCTGGCCAAGAAGGGCTTTATTGGCCCTGGCGTCGATGTGCCCGCCCCCGACATGAGCACCGGCGAGCGGGAGATGTCCTGGATCGCCGACACCTACGCCAGCACCATAGGACACTATGATATTAATGCCCACGCCTGTGTTACTGGTAAGCCCATCAGTCAGGGTGGAATCCACGGACGGATCTCTGCTACCGGCCGGGGAGTGTTCCATGGGATTGAAAACTTCATCAATGAGGCTTCTTACATGAGTATTTTAGGAATGACACCAGGATTTGGAGACAAAACATTTGCGGTTCAGGGATTTGGTAATGTGGGCCTGCACTCTATGAGATATTTACATCGTTTTGGTGCTAAATGTGTTGCTGTTGGTGAGTCTGATGGCAGCATATGGAATCCAGATGGTATTGACCCAAAGGAACTGGAAGACTTCAAATTGCAACATGGAACAATCCTGGGCTTTCCCAAAGCAAAGATCTATGAAGGGAGCATCTTGGAGGTTGACTGTGACATACTAATCCCTGCTGCCAGCGAGAAGCAGCTGACCAAGTCCAATGCACCAAGAGTCAAAGCCAAGATCATTGCTGAAGGTGCCAACGGACCGACAACTCCAGAAGCTGATAAGATTTTCCTAGAGAGGAACATTATGGTTATTCCAGATCTCTACCTGAATGCTGGAGGAGTGACAGTGTCTTACTTTGAGTGGCTGAAGAATCTAAATCATGTCAGCTACGGTCGTTTGACCTTCAAATATGAAAGGGATTCTAACTACCACTTGCTTATGTCTGTTCAAGAGAGTTTGGAAAGGAAATTTGGAAAACATGGTGGAACTATTCCCATTGTACCCACAGCAGAGTTCCAAGACAGGATATCGGGTGCCTCTGAGAAAGACATCGTGCACTCTGGTTTAGCTTACACCATGGAGCGCTCTGCCAGGCAAATCATGCGCACGGCCATGAAGTATAACCTGGGGCTGGACCTGAGAACGGCCGCCTACGTCAACGCCATCGAGAAGGTCTTCAGGGTGTACAACGAGGCTGGCGTGACCTTCACATAGACCAGGCTGTGGCTGACTTCCTCACTGCCCTTTCACCTCTTCATCTGCAGACCTATCACGAGTTTACATGTAACCACGGAAATCTCTCTCTCATGACTTAACAGATAATGGACACCATTTGCAACAAGTCAATCCAAATCAGCCCCTTAAGAAAATTAAGGTTAGGGGATCATGTATAAGCTAATAGGTGATCGTAGAAATTAGCTATTCCAGAGAGTCGTTTGGGCATTTTGCCTTTAAATACAGTTTCTTCCGCCTGCCTGTGCTGCCTTTCTCCATGGCTGCTCCTCGGCACAGTCGGCTGTGGCCCTGGGAAGGCACCTGCCGGCCAAGACCAGTCGGTCACTTGCCGCTTCGGCTCTGAACACGTCTGCCAGGAGCTTTGACACATGTAAGAAGCAGGTACGTGGCATTTTCAGGAGGTAGCATGGTTCTCAAGTGAGTTATTGGTATTTTACATCAGCAAAATAACTCGATCTTACAGGTTACAAACAAAAACAAAACTGTTTCTCTTTATGTATTTTATTTTAGAAAAAGTACATGCTGCTGTAAGAAAATTGCCTTTAATCATTTAACAAGCCTAACCTTGACTCAAGCAGTGAATGCCTATAAACATAATAAATGAAAAAAGCTAGTATTTTTATAACATAAAACAGTATCATTTATAGCTTGTCAATTGCATACTGTCATCCAGCAAAAATAAAAAGCCCAGTAGAGAATTAAGTTATCTTCATACCTGCAAATGATGGAGGCTATTTTTGTTAAGGCTGTCGAATTTACTAACCACAATTATGATATATAGTCCAAAGAATGTAGTAACCTCCTTATCATGTTAATTAATTGTTCTCTTTTGAAGATCTGTTGCATTGACTAATTGAACGATAATTCAAGTAGAGTGTCCCAGAAAAAACTGCTTGGGCTCCCTCTTCGGAGTCTGGCTGGCAGCCCTGAGCATTGCCAATGGCCCCAACTCGCCCTGACTTTGTGTCCTCGTTTGGAGGCCTCATCTCTGTGCACGGCTTCCGCCCCAGTCGGCTGGAAGCAACTTGGGGTGTGTTTTGTTGGGAGTTGTTTGGCCAGGGCCTTTGAACAGTAGTGTCCCAATGAAGTACTAGAGAGTATTTATGTAAGAATGAGCTTTTCTTTTTTTTTTAAACAATAATATCCTTTTAGAAATTTCTAACTACTTTGTAACTGCATGACTTAACCTGGTGATACAACAGTTATTAAAAAGACTACCTTTTCCAAAGCTTATGTTTCTTTTCTGTGTTTTTGTATTTGATATGTTTGCCTTTTTCAGTAGATGATAAAACTAATTG EMBV3_08154 ACCTGGTGGTTACAGAATGGTCAAGTCCAACAGCAGTCCCTAGTTTATTCACAGCGCAGC Gene BVT0102_369609 + 0 NULL GK000023.2:41165362-41165797 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135209 TCONS_00135210 TCONS_00133456 TCONS_00135205 TCONS_00135211 TCONS_00135206 TCONS_00135207 TCONS_00135212 TCONS_00135208 2 XLOC_081660 XLOC_081114 Coding TCONS_00135206 XLOC_081660 Coding Coding JARID2 23:41165199-41307128 j TSS100640 6363 1 TCONS_00135206_6 1064 0.06003457488606 18 0.955294233695959 0.00675189966267994 0.00429415571363386 0.0060240426169515 0.00258610570100275 0.00336340705933198 0.000476402452260922 0.00247857335981014 0.00169704782153131 0.00305961485859747 3.99967222569734e-06 3.79671132865453e-27 7.71931822034632e-06 0.000563085571434421 0.000192399620360411 1.79880521126573e-08 1.34485594644647e-13 3.77228885599049e-12 2.30062250660123e-38 0.00217300282948055 0.00172524435699534 0.00137574862163088 1.86178215999154e-16 2.89448037525584e-25 3.68149475889904e-12 0.00286452695071608 0.00587549897647322 0.00263057747293379 8.50030789591659e-08 8.03208349866962e-13 1.72515189982467e-20 XM_005196693.1 JARID2 PREDICTED: Bos taurus jumonji, AT rich interactive domain 2 (JARID2), transcript variant X2, mRNA. 0.0 9151 100.00 0.797265440829797 NM_001267040.1 JARID2 Homo sapiens jumonji, AT rich interactive domain 2 (JARID2), 0.0 6942 87.78 0.859343077164859 TCONS_00135206_6 sp|Q92833|JARD2_HUMAN JARD2_HUMAN Protein Jumonji; 0.0 1972 92.13 0.996240601503759 4 coding 0 0 0 0 -0.125709974162036 0.491429672893186 -0.00211191519943248 0.966346068122666 AGAGAAAAAGGAGAGGGGAAAACAGAACCTTAGCCGGTCGGAGTGATGATCTTTGAAGGTGGATGAAGGGGCCACAAGCCAGGGAAGCCGAAAAGGCAAGGCGTTGGATTTTCCCTTTAGAGCTTCGAGAAGAAAACAGCCTTACCAAACACCTCCGCTTTAACCCAGTGAAACTGATTTTGACCTTCTGGCCTTCAGAATCTGTTGTTGTTGTTCAGGCGCTAAGTCCTCTCCCACTCTTTGTGAACCCGTGGACTGCAGCATGCCAGGCAGGCTCCCCTGTCCTTCACTATCTCCTGGAGGTTGCTCAAACTGGATGACAGTGATGGGATTCCGTGGTCAGAAGAAAGGGTGGTACGTAAAGTCCTTTATTTGTCTCTGAAGGAGTTCAAGAACGCCCAGAAGAGACAGCACGGGGAAGGCATTCCTGGGAGCCTGAAGGCCGTGAACGGGCTCCTTGGTAATGGCCAGTCTAAGGGATTAGGACCAGCATCAGAACAGTCAGAGAATGAGAAGGACGATGCATCCCAAGTGTCCTCGACTAGCAACGATGTTAGTTCTTCAGATTTTGAAGAAGGGCCGTCGAGGAAAAGGCCCAGGCTGCAAGCACAAAGGAAGTTTGCTCAATCCCAGCCGAATAGTCCCAGCACAACTCCAGTCAAGATAGTGGAGCCTTTGCTACCCCCTCCAGCTACTCAGATTTCTGACCTCTCTAAAAGGAAGCCTAAGACAGAAGATTTTCTTACCTTTCTCTGCCTTCGAGGTTCTCCTGCGCTGCCCAACAGCATGGTGTATTTCGGAAGCTCTCAGGACGAGGAGGATGTTGAGGAGGAAGATGATGAGACAGAAGACGTCAAAGCAGCCACCAACAATGCTTCATCTTCATGCCAGTCAACCCCCAGGAAAGGAAAAGCCCACAAGCATGTTCACAACGGACATGTTTTCAATGGTTCCAGCAGGTCGTCCCGGGAGAAGGACCCTGTTCAGAAACACAAAAGCAAAGAGGCCACTCCGGCGAAGGAGAAGCACAGCGATGCGCGGGCCGACGCACGGAGGGAGCAGGTGTCCGCGAGCCACCCCCCCGCCGCCCCCGCCGCCGGCTCCTCGGCCAAGGGGCTCGCCGCTCACCACCACCACCCCGCTCTGCATCGGTCGGCTCAGGACTTACGGAAACAGGTTTCTAAGGTCAACGGAGTCACCCGAATGTCATCTCTGGGTACAAGTGCAACCAGTGCCAAAAAGATGCGCGAAGTCAGACCTTCACCGTCCAAAACTGTGAAGTACACTGCAACGGTGACGAAGGGGACTGTCACATACACCAAAGCCAAGAGAGAACTGGTCAAGGAAACCAAACCCCATCACCACAAGCCCAGTTCCGCTGTCAACCACACAATCTCAGGGAAAACTGAAAGTAGCAATGCAAAAACCCGCAAACAGGTGCTATCCCTCGGGGGGGCGTCCAAGTCCACCGGGCCCGCCGTCAATGGCCTCAAGGTCAGTGGCAGGTTGAACCCAAAGTCGTGCACTAAGGAGGTAGGGGGGCGGCAGCTGCGGGAGGGGCTCCGGAACTCCAAGCGGAGGCTGGAGGAGGTGCCCCCGGCCGACAAGCCGCAGTCGCCCCCCAAGAAGATGAAGGGGGCTGCGGGCAGCGCCGCCGAGGGCCCCGGCAGGAAGGCAGCCCCGGGCCCCGCCGAGAAGGCGCCGCTTGGGGCCCCTGGGAAGAAGGAGGCGCCCGAGCGGAGCCTGGAGAGGAACCGACCCAAGCGGGCGGCAGCCGGCAAGGGCCCGCCGGGCAGACAAGCACACGGCAAGCCGGACGGCGGCGCCCCCTGTGAAAATCGTTCTACCTCGCAATCGGAGCCCCTGCCTCGGCCGCACGAGGGGGCGGCCAAGGCCGAGAAGGGGGCCGGCAGGGCCGGGTGGGCGGCCATGGACGAGATCCCCGTGCTGCGGCCGTCGGCCAAGGAGTTCCACGACCCGCTCGTCTACATCGAGTCGGTGCGCCCTCAGGTGGAGAAGTACGGCATGTGCAGGGTGATCCCGCCCCCGGACTGGCGGCCCGAGTGCAAGCTCAACGACGAGATGCGCTTCGTCACGCAGATCCAGCACATCCACAAGCTGGGCCGGCGCTGGGGCCCCAACGTGCAGCGGCTGGCCTGCATCAAGAAGCACCTCAGATCTCAGGGCATCACCATGGACGAGCTCCCGCTCATAGGAGGCTGTGAGCTCGACCTGGCCTGCTTTTTCCGGCTGATTAACGAGATGGGCGGTATGCAGCAGGTGACGGACCTCAAAAAATGGAACAAACTCGCAGACATGCTGCGCATCCCCAGAACCGCCCAGGACCGGCTGGCCAAGCTCCAGGAGGCTTACTGCCAGTACCTGCTCTCCTATGACTCCCTGTCCCCCGAGGAGCACCGGCGCCTGGAGAAGGAGGTGCTGATGGAGAAGGAGAGCCTGGAGCGGCGCAAGGGGCCCCTGGAGGGCCACACGGAGCAGGACTACCACCGCTTCCACCCGCTGCCCCGCTTCGAGCCCAAGAACGGGCTCATCAATGGCGTGGCCCACAGAAACGGCTTCCGCAGCAAGCTGAAGGAGGTGGGCCCCGCGCAGCTCAAGACGGGCCGGCGGCGACTCTTTGCTCAGGAAAAGGAGGTGGTGAAGGAGGAGGAGGAGGACAAGGGCATCCTCAGCGACTTCCACAAGTGTATATACAAGGGAAGGTCTGTTTCTTTAACGACTTTTTACCGAACAGCAAGAAATATCATGAACATGTGCTTCAGCAAGGAGCCCGCACCAGCTGAAATCGAGCAAGAGTACTGGAGGCTCGTGGAGGAGAAGGACTGCCACGTGGCCGTGCACTGCGGCAAGGTGGACACCAACACCCACGGCAGCGGCTTCCCGGTGGGAAAGTCGGAGCCGTTTTCAAGACACGGATGGAACCTCACCGTCCTCCCCAATAACACAGGCTCCATCCTGCGTCACCTCGGTGCTGTGCCTGGAGTGACAATTCCCTGGCTGAATATCGGCATGGTCTTTTCTACCTCATGCTGGTCTCGAGACCAAAACCACCTCCCTTACATTGACTACTTACACACGGGTGCTGACTGCATTTGGTATTGCATTCCTGCTGAGGAGGAGCACAAGCTGGAGGATGTGGTGCACACTCTGCTGCAAGCCAACGGCACCCCCGGCCTGCAGATGCTCGAGAGCAACGTCATGATCTCCCCGGAGGTGCTGTGCAGAGAGGGGATCAAGGTGCACAGGACGGTGCAGCAGAGTGGCCAGTTCGTCGTCTGCTTCCCGGGATCCTTCGTGTCCAAAGTCTGCTGCGGCTACAGCGTCTCCGAGACCGTGCACTTCGCCACCACCCAGTGGACGAGCATGGGCTTCGAGACGGCCAAGGAGATGAAGCGTCGCCATATAGCTAAGCCATTCTCGATGGAGAAGTTACTCTACCAGATCGCACAAGCGGAAGCAAAAAAGGAAAACGGCCCCACTCTCAGTACCATCTCAGCCCTTCTGGACGAGCTCAGGGATACGGAGCTGCGGCAGCGGCGGCAGCTCTTCGAGGCCGGCCTCCACTCCTCCGCCCGCTACGGCAGCCACGACGGCAGCAGCGCCGCGCCCGACGGCAAGAAGAAGCCTCGGAAGTGGCTGCAGCTGGAGACCTCGGAGAGGCGGTGCCAGGTGTGCCAGCACCTGTGCTACCTGTCCATGGTCGTGCAGGAGAACGAGAACGTGGTCTTCTGCCTCGAGTGTGCCCTGCGCCACGTGGAGAAGCAGAAGTCCTGCCGCGGCCTGAAGCTCATGTACCGCTATGACGAGGAACAGATTATCAGCCTGGTCAATCAGATCTGTGGCAAGGTATCTGGTAAAAACGGCAGCATTGAGAACTGTCTCAGTAAACCCACACCAAAAAGAGGGCCCCGCAAGAGAGCCACGGTGGACGTGCCGCCCTCCAGGCTCGCATCCTCCTGAAGACGCCAGCGCCGTGGGCGAGGGATAGACATTATTTTGTAATTATTATATTCTAGTTTGGAGTACTTGCTGTAGGATACAAGCTGTCTTTGCACTAGCTCTAAAGAAGATTTTCTTCTGGTTTTAGAGAACTAATTTTGTTTTAGCATTAAACTGTTGAACTTTTTTTTGTACTTAGAATACCTAGATACTGCAGTCAGATTTTTGAAACTGCCGTATATTCACTGTTTTAAAACCCTTGAGGGGCTGTATTAATTTGTATCGCCCCTTGTGGCTGACAAAAAAGCCTTTTTGTTTGATTTTTTTTGTGTTTGTTTTTTTGTTTCTGTTTTTTTTTTTTTGTAATTGTTGGGGGAAAAAAGGCTTTTTAACCCATTTTTGAAGAGGGTGAAGTTTGGAGAACAAATTTTAAAACCATCAGTCATGTGAGCAGATTTTTTTCTAGAGAGGAAAAGGGATAGACACATACACACACATAACAAAAAAAAACTTGAACGAAATGGCTTTACTTTGGCTGTCTTTTCTTCTGTCACGTGCGGGATGAGTTTGTAAGTGTTAAAAACCGGAGAATCCCCATTTTGTTTCTTTGGGCGGTTGTGGCAGCTGAAGGCGGACGTTGTTTCCTAACCATAGGCAAAATGAGGAGGTCAGAGCCACTGGGCTCTCTCTACCAGCACTTCACTATGCATCTGTTTAAGGAGAAAGGAAGAGAAGAAAGACTGCCTGCCTTGGAGGGGTCACGTGAGGGAAACCTGTGCCTGATTTCATTAGGAAATCCATTCTGTTCTTTTTTGGTGCTGTTGGCTACTTTATCAAAAAACCCTTCAATAGCATCCTTAAGAAAAAAAAAAAAGGAAAAAAAAAGTGATTGAAGCCGGAAGTGCTTCTTTGTCATGGATGTGCAATCTTTCTAACATTCCATCTTCATCTCACCTGTTTGTTGTTTTACACCTTCACAGGTCAGCATTAATTTTTCTTTTTAAACTCGTTTCGTTGGTGATCACATCTAGAGCCACTCGGAGGTCTGCGGTTCTTTTTGAATGTGAAAATGCATCTGCGCTCATCTGGTCTATTTTTTCTCTTCATGTTGTAACAAAAAGAAAAAAAGGAAAAAAAAAAAAAAAAAAACCCGTCCCTTTTGTACATACGCCTGTAAATTGTTTCAAATACTTGAGCCTTTTTCTGGGTGGGGGAGGGGAGGGCGCGAGGACAGATGAAGAAAAGCCTTACACTTCCGTTTCTTCATCGGGTGGACTGGATGCTTACAGGGTTTTTCTTGTAACATTTATAAGTGCTGCTTACATCACTGAACAACAACAAGAAAAATAATAATGGAGTAGCTGTTGCCCTTCTCCGGTTGTGTGTACAGTATGTGTGGAATAAAAAAGGGAACCTGTTTTCACAAGCTGTTCTTTGTTTCATGATCGGACTCCGCGGTCCCGCAGCCGCCCGCGTTGCACTGAGCTGGCCGGCGGGCTGTCAGCAGCGTCCTGTGGTGCACTCGGCCGTCGGCGCCGAGGACGGAACTGTGTTGGCGTGTTAAGTGACATGAGCAGAGTCGTGTTTCCAGTGTGCTCGTCCGGTTTCTATGGCCTTGCTGTGTACTGGCCCTCTTGGACAGTGAACTTCTGCCTCCGGCTTACGGTCTGACGTTTTAATTTATTAGCGCTGCTCTGCACCCCTCCCTCGGGAGGGAAGACTTTTCATGTTGTTTATTGCCAGTTTTTGTTTACTTTTCAGGTTTGTACTACAAGGTTTAATAATAAAACAAAGTTTTTTGGACACCTGTTTGTCTTGTGGAAGATGAGTGAGTGGAATCCGCTCTTTTCTGATCACAGGGCTGAGGGTCCACCCCCTCGGCCAGGGAGCGGCGTGAACACCGAGTTGTAATCTCATTTTCTGACAGTGGTGAGTGGTGGTGGGGGAAGCACAGCCCTCTGGTACCAGGGTCTGCTCAGGAGTGAAACGGCGTGGGGACTGGGCCCGTGTCCCCCCCCCATGCCCAGGTGTGCTGCGCTGTGAATAAACTAGGGACTGCTGTTGGACTTGACCATTCTGTAACCACCAGGTGAAAACCTGAACTTCGTTAGAGCTGAGAGGAGGCACGACTTCCTACCTGTAAGGGGCCTTGCTCGTCAGCGCTGAGCTGGTGTGGACGCCAAGCTCCCCGGCCCCACCTGCAGAACGCGTGTATTTAGCAGCCTTTCTGTACCAACTGGCTGTGTTTAAAGTTCTCAGACTTTATTGTTAGCTGTTCTTGCAGTCACTTGCCTCACATTGTCAACTGTGTAAAAAACCAAGAGCCCCCCTCAGTCCACCTGCCTTCACCACGGGCCTCTGTGCACGGCTGCATCGTCCTTCAAAGGTAGTCGGCACGCAGGC EMBV3_19594 TGTCAAGCCCGGGGACCTGGTAGCAGAAGGTCAGGAAATCTGTGTGATTGAAGCCATGAA Gene GeneID:614302|PCCA:NM_001083509:38_cdna Constitutive 0 NULL GeneID:614302 12 GENE PCCA MGC142931 propionyl Coenzyme A carboxylase, alpha polypeptide EMBV3_28828 CTTCAAGATCACGTCCATATGCTGGGTGCAGAGCTCCTGGGTGCATAGTGTCCTGGTCAT Gene GeneID:509974|GPR114:XM_002694793:619_cdna UTR3_Alt 3 NULL GeneID:509974 18 GENE GPR114 NULL G protein-coupled receptor 114 EMBV3_24796 GATATTCTCCACCTTCGGGAGAGTTAGAGTGATTGACATGCCTGTAGAGAGGATGCACCC Gene GeneID:787144|LOC787144:XM_002688533:127_cdna Constitutive 0 NULL GeneID:787144 7 GENE LOC787144 NULL similar to ribonucleic acid binding protein S1 EMBV3_20495 TGTGAGGGGACCAAGAAAATTTTAAATACAGTGTATTTTCCAGCTTCCGTCTTCACACCA Gene GeneID:520757|RNF10:NM_001076869:198_cdna Constitutive 2 NULL GeneID:520757 17 GENE RNF10 MGC139926 ring finger protein 10 EMBV3_38632 CACTTGGAGGCAGCTTTTTGCACAGGGGCATCAAGGGGAGTTTCCAGAACAGAGTTGTCT Gene GeneID:782885|ZNF605:XM_002694442:16_cdna UTR3_Alt 2 NULL GeneID:782885 17 GENE ZNF605 NULL zinc finger protein 605 EMBV3_35511 TGTCATCAGTCATACTCCAGCCTTCTCGTCCACCTCTTGGAATTGGTTCGGGAGAACTCT Gene BVT0102_264488 - 1 EMBV3_42144 GK000008.2:23008042-23016039 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227119 1 XLOC_138170 NonCoding TCONS_00227119 XLOC_138170 NonCoding NonCoding IFNA16 8:23009779-23083535 x TSS169631 759 1 TCONS_00227119_1 61 0.13570487483531 2 0.989736289065148 0 0.000247127888691948 0.00018898157375359 1.09409153422481e-05 0.000229295371502101 1.88513974274361e-06 1.92084988868611e-05 3.11711739594167e-05 3.11862802146273e-05 0 0 0 2.07918906364264e-05 0 0 0.000260984020906571 0.000328109870813495 1.10192681098569e-05 0.000232102738650786 3.78994045700552e-05 0 0 0 0 4.25993969710222e-05 5.26012054197973e-05 9.54653312319349e-05 0 0 1.58425037479376e-05 XM_867297.4 PIWIL3 PREDICTED: Bos taurus piwi-like RNA-mediated gene silencing 3 (PIWIL3), mRNA. 8e-07 59.0 87.76 0.0606060606060606 0 noncoding 0 0 0 0 0.0242751058314843 0.877462634614576 0.032306987161299 0.527976908082623 CATGACTGAAGCGACTTAGCAGCAGCAGCAGATGGCTGAAAATCAGAGCATGTTGTGGTATGTTTTCAGATTCAGGACTGTTTCTGGGGAAAGGGGCTAATTCAGGGACAACAGGAAAGGCGTCTACAATCCGGACAGAAATCTACTCTATATCGCGACCCTCCAGTGGGAAGGAAGACTTGGGGACAAGACTGAGACTTAAAGGAGCCCCAAGGGAAAGAGAAAATTATTTCATTCAATATTAATATAAAAGAGTTCTCCCGAACCAATTCCAAGAGGTGGACGAGAAGGCTGGAGTATGACTGATGACAGCCGCCATCAATTAGGAAAAGGAAAACTAACGGTTGCTGCTAGATGCCATGTGTCACCAGTCAGATTGGCAAAATTGAAAAGGATGATAAGATCATGTTTTGGTCAATGAGTGAGGACATATAAGAGCTTATATGGTCTTGAATGTGGATTCATGTAGCCATTGTTGTCATGGACAGTTGGCAGTGTGCATGTGCAAGGTTTATGTATTTTGACCAATAAAATTGACTTCATGGCCCCGTGTTCAGACAAAGACTCTCGCTTGCGTATAAGACAGCTGCATACACTTGTAGCAGTCTCTTCTCAAAGGCACTAATTTCTGAGAAGGACCGACTCTAGGAGGTGACACTGCCGGCACTTAGGGACTGAAGTCTTCACGGAAAACAACTGGGATCAAACTCAGGACAGCCCAGGGCTGGAGAGCAGAGCCTCACCCTGCATGGCCCTGGC TCONS_00224651 TCONS_00224652 r 5' 5755 TCONS_00224663 TCONS_00224664 r 3' 3497 EMBV3_30090 AATTGGCTCTGGAGCCCAAGGAATTGTTTGGATCTGAAGCCTAGTAACATTGTAGTAAAG Variant GeneID:534125|MAPK9:NM_001046369:34_cdna 425^752 1 EMBV3_18399 GeneID:534125 7 GENE MAPK9 MGC137545 mitogen-activated protein kinase 9 EMBV3_33003 GGACGTGAGGACCGTTGTCTGTCGGAGGGTTTTCATAGGATTGGTTTTCTTCTGCCTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01806 AGTTTGAGCAGCTGGCACCCGTGCTGGATGGCTTCAGCCTCATGACCTACGACTACTCCA Gene GeneID:504781|CHID1:NM_001015515:236_cdna Constitutive 0 NULL GeneID:504781 29 GENE CHID1 MGC140688 chitinase domain containing 1 EMBV3_13922 TCCCCGACATACCTTCGGTCTGGTGCAGAGCAAACTCTTCCCTTTCTACTTTCACATCTC Gene GeneID:513699|TMEM205:NM_001037599:35_cdna Constitutive 1 NULL GeneID:513699 7 GENE TMEM205 MGC133512 transmembrane protein 205 EMBV3_16124 CTTGGCACCTGTAGTCTGGACTGAATTAAATGCGAAGGCTGTGAGACGTCCTGTAGCCGT Gene BVT0102_269405 - 1 EMBV3_11261 GK000012.2:24926478-25129698 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27889 AAGAGCTGTTGTTCAGAGAGCAGCGGGCCACAGTACATACCTGCTTCTTTAAGGCGATCT Gene BVT0101_069132 + 1 EMBV3_33216 GK000029.2:17490166-17496571 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03858 AGGCCCCTGGAGGCGAGTTAATGGGTTATAAAAGGGTGGATTTTTTGTTGATCTCTTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39382 TGGCTTCAAAAGAAATAGGCTTAATGTTGAAATAATTGATTAGTTTGTACTTTCACATGC Gene GeneID:614007|SH3BGRL:NM_001035440:132_cdna Constitutive 2 NULL GeneID:614007 X GENE SH3BGRL MGC128272 SH3 domain binding glutamic acid-rich protein like EMBV3_24618 GCTGAAGGAAGATGAGGGGATCGCCTACAGTCTGCCCCGCCGGCTGGACACCAGGCAGTG Variant GeneID:286793|PRDX2:NM_174763:14_cdna 554^684 1 EMBV3_43054 GeneID:286793 7 GENE PRDX2 NULL peroxiredoxin 2 EMBV3_08469 GCCTGCAGTAGAACCTGCAGAAGCTAATACAAGGCACACTGGTCTTTTGACAAAATACTT Gene GeneID:525800|CCDC85A:NM_001102095:128_cdna Constitutive 0 NULL GeneID:525800 11 GENE CCDC85A MGC157226 coiled-coil domain containing 85A EMBV3_07375 AATCATAAAGAAATCCAACTCACCTTGTCAAAACTTTATAAGACGGGTCGGGAGATGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01301 CATTGTCCCTAATAGCATTTATGGGCTCACTGCTGCTCTCCTCACCACAGGACTGGACCT Gene GeneID:100336450|LOC100336450:XM_002690188:18_cdna Constitutive 0 NULL GeneID:100336450 9 GENE LOC100336450 NULL olfactory receptor, family 51, subfamily E, member 2-like EMBV3_37108 CGGCCCCCATGCTGCCTGACCCCAGCTACAACATTAACACCAGGATTGCTTCAGAATTAA Gene GeneID:507323|RIMKLA:XM_002686451:464_cdna Constitutive 0 NULL GeneID:507323 3 GENE RIMKLA NULL ribosomal modification protein rimK-like family member A EMBV3_31430 GATGTGCTGGACAACGACGAGGAGATCAAGCAGCTGAACCAGGAGATTCGAGACCTAAAC Gene GeneID:505552|MYT1:XM_002692242:1509_cdna Constitutive 0 NULL GeneID:505552 13 GENE MYT1 NULL myelin transcription factor 1 EMBV3_39220 GGTTTTTATATGTCAAATTGTTGCCACCATGAATGGGTGAGGGGAGAGGAGGTGGTGCCC Gene GeneID:510264|DHRS11:NM_001035088:230_cdna Constitutive 0 NULL GeneID:510264 19 GENE DHRS11 MGC128255 dehydrogenase/reductase (SDR family) member 11 EMBV3_08250 CTTTCAAAAGCGGAACAGGATATAACCACCTTGGAGCAAAGTATCAGCCGCCTGGAGGGG Gene GeneID:510368|LRRFIP2:NM_001038070:83_cdna Constitutive 0 NULL GeneID:510368 22 GENE LRRFIP2 MGC134611 leucine rich repeat (in FLII) interacting protein 2 EMBV3_05038 CTTGTAACTGATCAAAACATTTCAGATAATGTTACCAAAGAAGACTTTGTCACTTTTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18136 TTGCTGGAAGACGCTGGAACGCGCTCGGAGATAAACATGGAGGCACCTCCAGTCACCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12455 TGAACAGGAAGGTTTCTCAGCGCCGAGTTGACTTCTGCAGAGACCCAAATGCGATTGGAA Gene GeneID:538409|CASP6:NM_001035419:71_cdna Constitutive 0 NULL GeneID:538409 6 GENE CASP6 MGC127633 caspase 6, apoptosis-related cysteine peptidase EMBV3_19562 GCTGCACAAAGGCACCTAGCAGATATTTATGAGGATCTTGGCTCTGCTGACATGTGGATG Gene BVV0101_025310 + 0 NULL GK000013.2:47515678-47567634 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045323 TCONS_00045322 TCONS_00045320 TCONS_00045324 TCONS_00045321 1 XLOC_026411 Coding TCONS_00045323 XLOC_026411 Coding Coding SLC23A2 13:47563600-47706172 j TSS33105 5944 2 TCONS_00045323_3 292 13 0.95839967454812 0.000801475347840412 0.000636760195077097 0.000737005741718803 0.00028690109688735 0.000280150765181555 0.000452371904854482 0.000269190420185553 1.32743237251587e-80 0.000678890685806121 0.000534826027583136 1.58682576782996e-05 1.39218266039009e-07 8.48601130081965e-05 0.000135780402221361 0.0002141198581177 0.00238944957543529 0.00185441545295355 0.0002478292926705 0.001034768620171 0.00107057048628525 0.000240903273918133 0.00107634427735722 0.000613332538233353 0.00168176417512349 6.15478040617405e-13 0.000358572977319576 0.00119657842925089 1.67584366884309e-06 0.000195064036913462 0.000170728106183149 NM_001205430.1 nucleobase transporters Bos taurus solute carrier family 23 (nucleobase transporters), 0.0 1725 100.00 0.160666218034993 XM_005260901.1 SLC23A2 PREDICTED: Homo sapiens solute carrier family 23 (ascorbic acid transporter), member 2 (SLC23A2), transcript variant X1, mRNA. 0.0 1950 80.92 0.342866756393001 TCONS_00045323_5 sp|Q9EPR4|S23A2_MOUSE S23A2_MOUSE Solute carrier family 23 member 2; 0.0 524 95.90 0.996268656716418 1 coding 0 0 0 0 -0.471370398399597 0.0621103066293567 -0.00191087596595561 0.969033086635572 GTCGCGGGAGCCAGAGGCAACGGCTGGTACTGCGGAGCGGAGGCGCAGCCGGCAGGACTGGAGCCCGGCGAGCTGCAGCCAGGTGCTAAGAAATGGCACTTGTGGGGCTCATCTCTGCCTGAGAATCGGCACTGGAAGAGCTGACTCTGATCTGGGCTCCTTGTATTGACAAGCCTTAACTTCCAACCACTTCAGTCCCCAAGCTACTCTTTTTCTCTTAATGATGGGTATTGGTAAGAACACTACATCCAAATCCATGGAGGCTGGAAGTTCAGCTGAAGGCAAATATGAAGATGAAGCGAAGCACCCGTCTTTCTTTACTCTTCCGGTGGTGATCAATGGAGGGGCCACATCCAGTGGTGAACAGGACAATGAAGACACCGAGCTCATGGCAATATATACAACAGAAAACGGCATCGCAGAAAAGAGCTCCCTTGCTGAGACCTTGGATAGCACTGGCAGTCTAGACCCCCAGAGATCAGATATGATTTATACCATAGAAGATGTTCCGCCCTGGTACCTGTGCATATTTCTGGGGTTGCAGCATTACCTGACGTGTTTTAGCGGCACCATCGCAGTGCCCTTTCTGCTGGCCGATGCCATGTGTGTGGGGTATGACCAGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCTTCTGCGTGGGAATCACAACTTTGCTGCAGACCACTTTTGGATGCAGATGTTTCGGTTGCCAACGGAACGACAGCGCTGTTACACACAGAACACATCTGGTATCCCCGAATACGCGAGATCCAGGGAGCCATCATCATGTCCTCATTGATAGAAGTGGTCATCGGCCTCCTGGGCCTGCCTGGGGCTCTGCTGAAATACATCGGGCCCCTGACCATCACACCCACTGTGGCCCTCATTGGCCTCTCTGGTTTCCAGGCAGCAGGAGAGAGAGCAGGGAAGCACTGGGGCATCGCCATGCTTTCAGTGGGGACTGCCCACTGTCTCTGCAGCTGGTGTCATCGGCATGCTCAGTGCGGTTGTTGCCAGTATTATCGAGTCTATCGGGGACTACTATGCCTGTGCAAGGTTGTCCTGTGCCCCATCACCTCCCATCCATGCAATAAACAGGGGGATTTTCGTGGAGGGTCTCTCCTGTGTTCTCGATGGCATTTTTGGAACTGGGAATGGCTCTACTTCATCCAGTCCCAACATTGGAGTTTTGGGAATTACTAAGGTTGGCAGTCGTCGAGTGATACAGTACGGCGCAGCCCTCATGCTTGCGTTGGGGATGATCGGAAAGTTCAGTGCGCTCTTCGCCTCCCTTCCAGATCCTGTGCTTGGTGCCCTCTTCTGTACTCTCTTTGGAATGATCACAGCTGTTGGACTCTCTAACTTGCAGTTCATTGATTTAAATTCTTCCCGGAACCTCTTTGTGCTTGGATTTTCAATCTTCTTTGGGCTCGTCCTTCCAAGTTACCTCAGACAGAACCCTCTCGTCACAGGGATAACAGGAATCGATCAAGTGTTGAATGTTCTTCTCACAACTGCTATGTTTGTAGGAGGCTGTGTGGCTTTTATTTTGGATAACACCATCCCAGGTACTCCAGAGGAAAGAGGAATCAGAAAATGGAAGAAGGGCGTGGGCAAAGGGAGCAAGTCTCTCGATGGCATGGAATCCTATGATTTGCCATTTGGCATGAACATTATTAAAAAATACAGATGTTTCAGCTACTTACCCATCAGCCCAACCTTTGCAGGCTATACATGGAAAGGCCTCGGGAAGAGCGCTAGTAGCCGGAGTTCAGATGAAGACTCGCAGGCCACAGTATAGCCGTAGCTCATCCTGTGGCCTGGCCACAGTGAGGCATGAACCTATAGTTCCTTGCTGAGTAACAAGCAGTAACATATATGTTTGTAGATCTGCATTTACATTCTCCACCCCAGAGCTAAGACAGATTACAGGTAGCTTTTTCTTGTGGGTTGTGATCATGTCTAATACGATGTCTCATCTATCTTTTTATTTAAGCCCTTGAGAACATCCGTTGATAGTCATGGTCACTGAATTTGAAGTTCCTGCTCTCCTGTGGGAGTGGATGCTTGAAGTCTACAGTGACTCCTTGTTTGCAGTCCCCTTCTAACAGCCTGTGCTAGCTTACTTACAGGGCACCTCCAGGGCTTTCTGTCCTTGAAAGCACCAGGACCTGTACCTATAGAGACCTCCTCTGGTCAGGAGGTACCAATATCCTTGCATTGTCACAACTGACTGGTCAAGTGTGATTTTATGATGCCTGATCCTGTGTGTAGGTGGCTGCTGGCCAGTTGAAAACAGTGAGATGCTTTACACTGTGCCCAGATCTGTGCATGGGTCAAGTCTGTACAGATAGAATGGGAATTGGGGGATTGGACAGGAAGGGAAAGTACCTTGAAATCAGTGTCTGATTCTCAAGCACACTTTCTTGGTGCCACCCTGGCCCAAGCTAGGCCAACCCGTCTCCTATTGGTCTCCTTTGTACTAGTAGCTGAGACACTCTATTTGGTATTCATCACTCCTGGCTGGTGTGACGGGTATAGAGTGCTGCACAAAGGCACCAAGCAGATATTTATGAGGATCTTGGCTCTGCTGACATGTGGATGTCAGTTATCGTTGTGTGTATTTGTAATTACAAGATTTTATTCCTATTTAATGTTACTGATTATGGATTTTTTAAATCAGTGTTTTTCCATGTGACCCTCTTACCTTGCATCCCTATTACTTGTCCCTTATCTCCTATCCCCCATTAAGAAAGGAACCAGCATTTGTTAAAGCTATGGACACCAACAGGGAAGTTTGTTGTCATGGCTCTAGAAGGCCAGTAACCATTTTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTGTAAATACATAATGCTTAATCTGTTTATCAAACTGACTGCTGGACCAGAGCCCAGAAACCATGAGTTAAGTTATACGTTGATTTGTTTTCTGAAGAAGGGAAGCCAGGGCAGGTGACAAAACAGCTGCCGTATTGAATGGTTCCGCATCCTGGTAAATTAATCACTGCAGTTAAGTTGCCATTCACATCTGGCAGTTAAGGCTTAAGGAGACTTTCTGTGGGTTGTCATGTTGAATGTCCACTGGATTTTTATTTTCCAGAGGGGAAGACTAGATCCCCTGACCAAATGCTTCCTTTCTTGTTGAAGGGGTAAGAAAAGCAGCTAGCAGTCCCCCTCTCTTAAATTCTTATTAATAACATTATTTCTGACAAAAATGACTTACTGAATTTGGTTTGAAATTTTCAGTCAAAAGAAAAGCCTGAGTGACCTTGTTTCATGAGATAGTACTTCTTGAGTGTTTATTTACCTGATTGTTTACAGGCAGTGGGCACATGGCTCTTGGCAGCCTTGAAGCCACATGGTGAATTTCTGGCCCCCACAACTGGCCTTGACTCCTATAAAGTTTGGGGCTTTAAGGCCTATTCTGGCAAGAACACTCCAGAGCTACTGCATTGTTTTGCCAAAACCTTATTGCAAATTAAGTAAAGAAAGACTCTAAATTTAAATTTGTATGGGTTTTTTTTGGGGGGGAGCATATTTAGAAGCACACTGGTTAATGATTTTCATCCTGTTGACTTGGTGAGTCCTGAAGACTGACAGCCCTAGTTGTCACCTTAATTGCCTAGTTTATTCTGTTTGTATTTTGCTTAGCATCTCCAATTTCTCTCCTCTGAACAGTGGGGAAAACTGTTAAACATCCCAGAGATTTGCAGTATTCTTGCTCTCTAGATGAGCAGAATGACCAAATACCCAAATGAAAGCCTCTGAACCATTGGTAATTCAGGAACAAGTTCCCTTCAGCTTAACTTGACCCAGGCATCTTCTCTCCCAATGGGTAACACTCAGGACGTGTGCAAGTCTTCAAAATGTGCAAAGAAGCCCTGTGCCCACACCTCCTATTGGAAAAAGAGGGTTTTCCCCCTTCTCGTTCCATTGGGGCCAACTTAGATTCTCTGTCCATGGTTGGGGGGGAAGGCATAGGAGGTTAGAAAATGTCCTCTTGCTTGCAGACACACTGCAGAATGAGTCTGTAGTTGAAAAAAAACTATATTCATCTGCTTCTTGGTTTGAGCACATACCTGAAAAGGAGGTTTTGGGGGATACTGTGCCTGTGCACCTGCCATGTGCGTTATTGGGGCCACATACACCCCATGCTTTGGCCAGTTGAACGTTGTAGGATGTTTTGAATGTGAATGTCTTTGGACATAGCATTCATTCTCCAATTCCCACTTGAACACCTACCCCCGCATTTTCCCATTTATATTGGTGATCATGATGTGAAAAGTAGAAACTTACAAATAGGACAAAAGACGCTGCAGTATCACTGGTTGGGGGGCAAGGGAGAAGCCACACTGGTTTTGATAACATTATCTAACATGGATCATAGAAAAATGGGAAATGGCTCCAGTCTTTGTAGGCAATTTTCATTCTTATTCTCGCAAATTTCACATAGATTTACTGATACAGAATATTTCTTAAGAGGGCTTCAGTGTTAGATTGTAGTAAGTTTCTTGTGATTGATCAAGGCAAGGGTCCTGATGGTTTCTCGTTTTCATGGTAACAAATTCATACACAGAATTTACTTCATACTGTAGAATACTGACTTTCATAATGATAACCTGGTTTATGCATGAATATTGCAGTATTTCCATATAGTAAAATAATATTTCTACCCAGGATAATAGTCACAGTTTTCCAGGGAGGGAATGTAATTTTCATGACAATGTCATGTGATGATAGAATTTCTCCATTGATGAATCTCTAGTATGTGTTTATACTTTATTTACCCACGCATATATTTTATGACCATGAGCTAAGTTGTTATTTCTTTAATTCATGTCCCTGCTGAAATATTAGTACTAGCAACTTGGACTTGAAGTTGACAACTATAATCTTCCATAACAATCAATGCCACAAGAGTGGTCAGGCCAGATAGGAGATGAATAAGGAACTGAGGCAGAAGCCTCATCCCAGAACCTGTCTGATGCACAGAAAGGCAGCATCCTGCATACTCACCCCCACAGCTTGGGGTGGACACACAGCTGCGGGCAGCATGCCTGGCATGGCTGTTGCTGCCTGCTGGTTTGCTCACCCAGCTGTGCCCCCTGAATGCCCTGGCAGCCTGAGCTCTCACAGGGCCCACTTCTCCAGGGAGCTACCCCTTGGTCTTAGGAAAACACTTGGGGCCTCATATGTTACTTGTATTGTGCTCTGTCCCCTTACGATTTTGACACAGAGAATAGGACCTCCTCTACCCTCCATTCCTCCTGCAGTCACAAGTGGAGTAGTGCTAGACAGTTGCCCATTTTTTGCCAGTCCTCAGCTTCTGCCCTTGGACCCTTGAAGCATGTTAACACTGAAGATCCCTTTTCAGCTGCCTCTCACACATTCCTGTCCTTTTAGTCTATTCTTGACCTCCTTGTCCTCACCCTACACTGGTGACATCCAGCCTCCTTAGAATTGCTCTGTGTGTTTCCTGGCACTTAGGACACCCTCCCCAGTGGTGCCATCTTACTGACGGTCAAGTTAAAACACTTTTTGTTCATTCATAGCAACCTTTGTCATGTTAGTCAGTTTCTGACTGTTCTTAAAACAGTAGGGATGCCTATATTTTCCTTAAGTTTTTGTGACTGACTTTGGCTATATACCTTTCTGGGATTTTGTTTGGTTTTTATTTTTATTTTGCATATTGAGGGTATTTGGGGTGGGGTTGTTTTTTATGTCTAATTCTTTTATGGCGTTTTTAAAAAGAATTTTCATATTGTTTTTCTAACATACCTTCATTAAACGTTTAAGTATTTTAATATGTAATATTTGGACCAGATGTTGTGAATAATAGTAGAGATAAAGCTATTTTATTCTGTATTTTTAAAACTGTTCCGTACAAATAAAAGCTCTCCTGGACGCAA EMBV3_01043 AGAACTGCTAACATTCAGTCTTTTTATAAGCTATAAAATGGCACTTTCATATGGTTCAAC Gene BVT0102_223940 + 1 EMBV3_12383 GK000012.2:75500072-75664651 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00084 TCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCGGTCTTAGCTTGGGAGGCATT Gene BVT0101_005228 - 1 EMBV3_32288 GK000021.2:34651484-34698114 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00055559 TCONS_00220566 TCONS_00250669 TCONS_00198905 TCONS_00238581 TCONS_00210913 TCONS_00174805 TCONS_00171428 TCONS_00206300 TCONS_00174806 TCONS_00165821 TCONS_00226167 TCONS_00219592 TCONS_00118487 TCONS_00125692 TCONS_00250203 TCONS_00123823 TCONS_00001867 TCONS_00001866 TCONS_00118458 TCONS_00174808 TCONS_00174809 TCONS_00206299 TCONS_00218430 TCONS_00246741 TCONS_00001865 TCONS_00174807 TCONS_00232829 21 XLOC_033367 XLOC_133883 XLOC_153612 XLOC_120558 XLOC_145248 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_124877 XLOC_100661 XLOC_137940 XLOC_132911 XLOC_072644 XLOC_077234 XLOC_153146 XLOC_075375 XLOC_000454 XLOC_072622 XLOC_131750 XLOC_151107 XLOC_142312 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_15933 AAGTGTAAAATGTCCTCGGCCACCATCTCCTAGAATCAGGACCCATTTACCCTTCCTCCC Gene GeneID:100336965|LOC100336965:XM_002699499:66_cdna Constitutive 2 NULL GeneID:100336965 X GENE LOC100336965 NULL odz, odd Oz/ten-m homolog 1-like EMBV3_33501 CTTGGAGTAGCACATTAAGGGGTGTGATTGGTGATTCTTCATTCTGTCAGACACTAGAGC Gene GeneID:768079|IER3IP1:NM_001113320:206_cdna UTR3_Alt 1 NULL GeneID:768079 24 GENE IER3IP1 MGC139103 immediate early response 3 interacting protein 1 EMBV3_17550 GCCATTTTGGAAATGGATTCTCTAGCCCCAGCTGCCTTGGCTATGTAAATCAGGGGAACC Gene BVV0101_017413 + 0 NULL GK000015.2:74545279-74652042 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060012 TCONS_00060017 TCONS_00060015 1 XLOC_036560 NonCoding TCONS_00060012 XLOC_036560 NonCoding NonCoding - 15:74595757-74608428 - TSS44921 492 1 TCONS_00060012_1 35 4 0.961483820047356 1.38223506954555e-12 6.41004604058092e-43 7.52356945232858e-05 0 1.17397184677622e-11 1.4540875235432e-05 1.23538394106568e-10 0 0.00170301097560073 9.73788757770975e-06 0 0 0.00013343237867642 1.31906148790655e-11 0 3.69372342832367e-09 0 0 0 4.99229401123107e-13 0 1.31543068910663e-09 0 2.04656711093936e-09 5.18038495226663e-12 2.70957601647923e-21 0.000148072599425506 5.74026778943503e-24 3.62095410018838e-22 0 0 noncoding 0 0 0 0 -0.14058321794811 0.367815843664077 0.0460261601871256 0.379353554457517 GGTCTGCATTAGAAGATTGATAGGTTAAGTGAGCAGTGTTTAGTCATCTGTCATCTAGGAAACTCATAAATGGTATAGATGAGGAGGATATGAGGAGGATGACGCTGTCAACAGTAGGGAACTTGGCTTCTAAAATGAAAAGGAGGTTTTGGGGAGAGTCTGGCAGTGTCGATGCTTCCAGCAGATGAAGAATCAACCCCACCTGCAGCTGGTGTTGAAACTGGAAAACCTAAAAAGTTTTATCTCCTCATGAACCATGAAGATTCTTTTCAAGTGTGAAACATATCATCTTTAGAAGCCCAAGATCATGAAAAGAGGCCCTGGAAGATGAGACAGCAAGTAGAGAGGTCAAGGAGCACCAAGGAACCAGAAGAAGTGAAGTGTAAGTGAAGAAGCCATTTTGGAAATGGATTCTCTAGCCCCAGCTGCCTTGGCTATGTAAATCAGGGGAACCACCCAGTGGTGCCTCTCCCAGTTTTTGATCCCCCAAAT TCONS_00060018 s 5' 35824 TCONS_00060018 s 5' 48494 EMBV3_25368 AAGAAAGGAAGTTCTCTGCACATCGAAGCCCCAAAACCCGAAGACTCAGCCACTTACCTC Gene GeneID:100296683|LOC100296683:XM_002690589:41_cdna Constitutive 0 NULL GeneID:100296683 10 GENE LOC100296683 NULL hypothetical protein LOC100296683 EMBV3_25535 CTGAGGGTCAGCCTTTGGCTCCTTTTTCCTGAGACAGTGGAAACAATGCCAGCTCTGTGG Gene GeneID:785395|SDHC:XM_002685621:290_cdna Constitutive 0 NULL GeneID:785395 2 GENE SDHC NULL succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa EMBV3_20133 GGCCTTTGACCAAAAACTGATTTTCACAGTGGGGGAGTCTCGAACATTAGGAGTCTCAGG Gene GeneID:515051|DTX3L:XM_002684793:145_cdna Constitutive 1 NULL GeneID:515051 1 GENE DTX3L NULL deltex 3-like (Drosophila) EMBV3_15886 TCCCACCTCGACAGAAAGTCAGGATTACAGAGGACATGGATCAGGTGGAGCTGAAGGAGT Gene GeneID:528615|DNAJA4:NM_001102120:109_cdna Constitutive 0 NULL GeneID:528615 21 GENE DNAJA4 MGC165772 DnaJ (Hsp40) homolog, subfamily A, member 4 EMBV3_42090 CTCACTAGTTCTAAGTGTTCACATGGTGTAACAGGGAAGAGGAGCTAGAATCATTGTGTC Gene GeneID:539654|PCDHGA2:NM_001099368:23_cdna Constitutive 0 NULL GeneID:539654 7 GENE PCDHGA2 MGC148711 protocadherin gamma subfamily A, 2 EMBV3_29478 TGGACTCGGTGTGAGCACGGGAGGGCGGTTTGGAGGACTTGTTTTTGTGATTGGATAAGA Gene GeneID:539570|SIK2:XM_002692988:147_cdna UTR3_Alt 2 NULL GeneID:539570 15 GENE SIK2 SNF1LK2 salt-inducible kinase 2 EMBV3_07796 GCCCAATACCATCGATCACTTTGTGTGTGACATGGACCCACTGATGGCTCTGTCCTGTGT Gene GeneID:783845|LOC783845:XM_002690664:230_cdna Constitutive 0 NULL GeneID:783845 10 GENE LOC783845 NULL similar to olfactory receptor MOR106-11 EMBV3_26773 ATGTGGGCAGACTGCCACAGTCCTCAATAGGCTGGTTATAAGAAAAAATTATGGAAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14814 ACCCCGGAATTTACCCTCAGCCCCAAGTGAAGAGCAGCACCCGCTGTATGTCAATGTTTA Gene GeneID:524565|FCRL6:XM_002685897:122_cdna Constitutive 0 NULL GeneID:524565 3 GENE FCRL6 NULL Fc receptor-like 6 EMBV3_20544 TCCTGGGTATGTGGTGGTGATTTCATCTGGATTTCTCATGACGATTGACCCTCTACTGAC Gene BVV0101_032971 + 0 NULL GK000012.2:69754108-70024623 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037178 TCONS_00037187 TCONS_00037183 TCONS_00037180 TCONS_00037179 TCONS_00037182 TCONS_00037186 TCONS_00037181 TCONS_00037185 TCONS_00037184 1 XLOC_021324 Coding TCONS_00037178 XLOC_021324 Coding Coding ABCC4 12:70022949-70033796 j TSS26886 1941 1 TCONS_00037178_2 87 3 0.821316614420063 0.00827715060492484 0.00978735696439891 0.00532528990678459 0.00301681506407315 0.00329296368132743 0.00160999267500138 0.00221915734621568 0.00477852292850461 0.00452764315398275 0.00124869585997208 0.000540140129683869 0.0010209401633637 0.000173730488763499 0.000849519655029176 0.000234091570845876 0.059096324772093 0.0189935018561301 0.0543711941055979 0.00642177019290494 0.00476427031170885 0.00311584242324628 0.0147193422378149 0.0212615122046007 0.0334951678084444 0.00502210055561557 0.00588434283297253 0.0038067021581466 0.00499107452280672 0.00295654909876281 0.00752494873386269 XM_593336.4 ABCC4 PREDICTED: Bos taurus ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (ABCC4), transcript variant X2, mRNA. 0.0 3452 100.00 0.985574446161772 XM_005254025.1 ABCC4 PREDICTED: Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (ABCC4), transcript variant X1, mRNA. 0.0 1032 72.67 0.919113858835652 TCONS_00037178_2 sp|O15439|MRP4_HUMAN MRP4_HUMAN Multidrug resistance-associated protein 4; 3e-33 124 85.00 0.908045977011494 0 coding CGGATGGATATGGTTTTGTTTACTGTTTTGGATTCAGGGAGACTGAAAGAATATGATGAGCCATATGTTTTGCTGCAAAATAGAGACAGCCTATTTTATAAGATGGTGCAACAACTGGGCAAGGCCGAGGCCGCTGCCCTCACTGAAACAGCAAAACAGGTGTACTTCAAGAGGAATTATCCAGATATTACTCACAATGGCCATGTGGTTATGAACGCTTCCAGTGGACAGCCCTCAGCCTTTACGATTTTTGAGACAGCACTGTGATTCTACCATGACGTCAAGTCTGTTCCAGAGGCAATTTTCCAATAGTTTTTGCACTGTGTAAACTACATTTTACTTATTTTTATATCAGCAGCAGATATTTACACATAGAATATTGTTAGTCTATTTGGATTTTTTTCCTGCAACTTCACCCAGTGGTTTCAGGCTCCTAACAAAATTATTATTGTTATTTATATGTTAATAGTATTTTTGTCTTATCTAAATCAGAGGTACGGGCCACCAATAAAAACTGTCTACCAGGTTTCGTGCCTTAAAGAGACTCCAGAGCCAAAGCACATTTTCTAAGGTGTAAGACAAAGTTGTCATAGATGTTTTTTACTGTCCCCAAATTACATATTCCTTTCTAGTTATATCAGGGATTCTGTTTACTTGAAGACTCTGTGAAAGTTGCCATTTTGCCTTACCACTTTCTTTAACATAAGTAGGATCCACTATTCCCCACCAAAGACCTCTAATTAAGCTAGTACAAAATAGGGAAAACAAAAAATACACTTTAGTTGAAATTACAATAGGACGCGTTACCTAGGAGAGCCCCTCCTCCCCACCCCCCAAGATAAATGGTTAAAATACATGAAGGTCAGTATTTCATTATATCTTCTAAAAGAGATGGAAGAGAAAGGAATGCTTTCAGAAAATTGCCACTCTATGGGAATTTGATAATGATAGACACATGAGTGATCATTGATCAGCTTCTAGAGTCCATGGCTCTGACTTGATATACCTGTTGCAGTTTTAGATTCAGCTTGGTGATATTTCAAAAAGGCCATGCTGCTAACTGAAATTCCTGAGTATGTGGTGGTGATTTCATCTGGATTTCTCATGACGATTGACCCTCTACTGACATAAGCCTTTTGGTTTAGCCATCATTGAAATCCTGTCTAAATAGAAAGAGAAAAGTAGAAAGTGAGAAAATAGAAAGCCGTTGCCTACATTGACTGCGTTTATGCCCTGTGTTCTCAGGATGCATCAGGAAGGTTCACTTTCATGAGCCTGCCCAGGTTAGTTTACTTCTGACCACTAATTGCACTTTGTCTAGATCTTTCAGATCAGTAGATCAACAAACCACAATACTTCTGGGGCCTACAGTACTTGATTTGAGCTGTAGGTCCTTAGCTTTTCTTCATGGTGGTGGCTATGGTGTATTGATTTCAAGTTACTAAAGTTACTGCCCTGGTTTTAAGTGTACTCTCATGACCTCTCAATAAGGCATAACCACCCTCAAATTGCATATGTTTATATATATATGTGCCTTCTGATAGCTGGTATTTGGACTCTTTACCAGAGAGAAACAGATATTTCATAGAATCAAGCCTTAAAAACCACATACTCAGCAAACTTCCCAAATACATTGAGTGTAGTTTGTATTTAGAAAGAATACGGTTAATGTTTAGTCCAAAAATTATGTAGTAGTCATCGTTCTTATTTCAGGAGACTGAAATGACAACAAGGATAATATTGAGGTTTGTTAAAACAGTGGAAATATTTGAAATGTATATGTATGTGTTTATTTGGCCTTAAGAGGTTTGTTTGGGTGTTTGTTTTTTTTTTATCTTTAAAGGCAGTTAAATGTTTCTATTTTATTTCTTCTTCAATGGCATTATAGACTTTTTAAATGGAACAAAATTTAGTTGAAATAAATTTTTTCATCTCCAACGA EMBV3_32433 ACATTGATGACCTTAAGAAATTTCTAAAGCATAATTGGATTAAAGCCTCAAGGAGAACCA Variant GeneID:532844|ATP1B3:NM_001035393:51_cdna 511^695 2 EMBV3_36451 GeneID:532844 1 GENE ATP1B3 MGC127417 ATPase, Na+/K+ transporting, beta 3 polypeptide EMBV3_41137 GGAGCATTCCTGAAGAAAGTGGGCTGGATGGACACCCCCAAATACTTATTGTCTCCAGTC Gene GeneID:504826|NUDT7:NM_001109788:8_cdna UTR3_Alt 1 NULL GeneID:504826 18 GENE NUDT7 MGC166186 nudix (nucleoside diphosphate linked moiety X)-type motif 7 EMBV3_24631 CTACCGTGTAGAGCTGTGTGTGGCTTCTATTAGGTCCCTGGCGATTACTGAACCAAGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06785 ACAGGAAAAAGGAACTGAAAGCTTCTTCCAACAGCCACCTGGCCCCAGCTTCAGCACGTA Gene BVV0102_378918 + 1 EMBV3_29993 GK000027.2:15604016-15622995 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155088 TCONS_00156016 2 XLOC_094639 XLOC_094903 Coding TCONS_00155088 XLOC_094639 NonCoding NonCoding LOC790088 27:15611099-15623137 x TSS116118 555 2 TCONS_00155088_2 64 0.65045045045045 2 0.954058320179447 0.0202287671007135 0.019000044353505 0.0201991203825551 0.0105565730801454 0.0106380225837802 0.00358594088632627 0.00457763510533955 0.00779286171781929 0.00542345360186137 0.00181979299084172 0.000219312451301361 6.47755666669137e-06 6.02346590773869e-05 0.00105424088741732 0.000618837458302692 1.46635752989614e-09 0 5.57394309480274e-40 0.00791117011800466 0.0162917150504124 0.00810890834238889 0 0 0 0.0183129834787436 0.0158419922509188 0.0186436863127104 1.29478790949145e-09 7.65237107268452e-11 0.000197927451204939 XR_240357.1 LOC101905501 PREDICTED: Bos taurus uncharacterized LOC101905501 (LOC101905501), 5e-147 524 100.00 0.520720720720721 XM_005263638.1 IL36RN PREDICTED: Homo sapiens interleukin 36 receptor antagonist (IL36RN), transcript variant X1, mRNA. 3e-11 73.4 77.27 0.192792792792793 0 noncoding 0 0 1 1 -0.167087719320269 0.337458513186714 -0.0250588539045679 0.810979024070926 CAGGTTTATCAGCTGTGTGAGTTTGACACGTTCCCGAGTGTCTTAAAGAGCAACATGATTGGCTGAAGTCTAAGATGGGCTGGATGATCTCCAGCTTCTCACAGTCACTCCTGTGTGTGATCTCCTCCCATATCTTGCCAACCAGGGTCTGTGTAACAGTAGGATAAGCCAGAAGTGATGGTGTGTCACTTCAGAGATCAGGTTATAAAAGACAATGCTCTCCCTTCCTTCCCTCCCCTGCCCCCTCCGTCTCTCTCTTCCAAAGTATTTACTCTGGAGCAAGTCGAAAGGCCACAGGAAAAAGGAACTGAAAGCTTCTTCCAACAGCCACCTGGCCCCAGCTTCAGCACGTATCTGATTGCGGCCTCATGAGGGACCCTGAGCCAGATTACTCAGCCAAGCTGCTCCCAGATTACTGACCTCAGAAACTCCACAAGGTTTACATACAATACAAACACTTTATTAACAGCAGATCATCCTGGTGGGCCAAGGCGTCAACCCAGACATCCAGCACCCAGTCACAAGTTCAGCGCAGCCTCCGAGCCTCTCGCTCTG TCONS_00156017 r 5' 0 TCONS_00156011 r 5' 2978 EMBV3_41255 TCCGGAGAGCAGGATCTGACTTTATCTCAGGTATTCTTCTTACTAGCTAAGCAACACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41692 CAAGTCGAACATGGCACGTCACCAGGGAACAGTTGGTCCCGGTTTCACCAGTTGTTTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34644 CACGTGGAATCCTGTCTCCTGTAGTTTGGCTGCAATCGAAATGAAAGAATGCCTGAGAGG Gene GeneID:515648|MGC127492:NM_001034503:83_cdna UTR3_Alt 2 NULL GeneID:515648 15 GENE MGC127492 NULL similar to Protein C11orf33 precursor EMBV3_00998 TTCCATAACCTCAGATTACACCACGGGGAACCACATCAGACTCGCTCTAGCTGCCGTAAT Gene GeneID:527020|LOC527020:XM_002695517:340_cdna Constitutive 0 NULL GeneID:527020 18 GENE LOC527020 NULL similar to Immunoglobulin superfamily member 1 precursor (Inhibin-binding protein) (InhBP) (Immunoglobulin-like domain-containing protein 1) (Pituitary gland specific factor 2) (p120) EMBV3_35123 CTGCCTGTCTGTCTGTCTGGGGATGGGTGACCTCTCAACACCTGTAGCTCTCCATCATGA Gene GeneID:617258|CCL24:NM_001046596:314_cdna Constitutive 0 NULL GeneID:617258 25 GENE CCL24 MGC137287 chemokine (C-C motif) ligand 24 EMBV3_08853 CTGTATGAATCTTTGTGAAAAGGAAAACAACACCTCCTCCCATCTCCTGTGACCCACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06219 CTGAGGAGACATGCTTTGTTAGTGGGAGGGACTCAGAAACAGCCAAGCAGCCCAAGAACA Gene BVT0102_097023 + 0 NULL GK000013.2:18334729-18359843 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044641 TCONS_00044643 TCONS_00044646 TCONS_00044650 TCONS_00044647 TCONS_00044651 TCONS_00044642 TCONS_00044652 TCONS_00044648 TCONS_00044645 TCONS_00044653 TCONS_00044644 TCONS_00044649 TCONS_00044640 1 XLOC_026243 Coding TCONS_00044653 XLOC_026243 Coding Coding CCNY 13:18357397-18467966 j TSS32779 4103 1 TCONS_00044653_2 341 10 0.962982056291151 0.00145793380892311 0.00204465929979928 0.00149456973839762 0.00172957602292317 0.00119911509661298 0.000287160541404451 0.0011045022804404 0.00121807113181599 0.00040833189521215 0.00084685017405589 5.88850612743683e-08 7.33226016748107e-05 0.000206546702560594 0.00139788218164122 0.00126865688964492 0.00940478097061954 0.000778329838391614 0.000645738137402557 0.000698257646502493 0.000802901579238912 0.00178532105978295 0.00221174726957618 0.00254879276556895 0.00379734578230673 0.00175412898944354 0.00159301544453963 0.00123548595491382 0.000204553877312374 0.00037667084094693 7.06845032198706e-05 XM_005214274.1 CCNY PREDICTED: Bos taurus cyclin Y (CCNY), transcript variant X1, mRNA. 0.0 6455 100.00 0.872044845235194 NM_145012.5 CCNY Homo sapiens cyclin Y (CCNY), transcript variant 1, mRNA. 0.0 1950 83.64 0.446258834998781 TCONS_00044653_2 sp|Q8ND76|CCNY_HUMAN CCNY_HUMAN Cyclin-Y; 0.0 692 98.53 0.997067448680352 2 coding 0 0 0 0 -0.242511871271205 0.181987167516631 0.0163252718475601 0.725911916030861 NNGGGCCGGGGCGCCAGCCATGGGGAACACCGCCTCGTGCTGCGTGTCGTCCAGCCCCAAGCTCCGCAGGAATGCCCACTCGCGGCTGGAGTCCTGCCGGCCCGACGCCGACCTGAGCCGCGAGGACACGGGCTGCAACCTGCAGCACATCAGCGACCGGGAGAACATCGACGATTTGAACATGGAATTCAATCCCTCAGACCATCCTCGGGCCAGCACGATATTCCTCAGTAAATCTCAAACAGACGTGAGAGAAAAGCGCAAGAGTCTCTTCATTAACCATCATCCTCCAGGACAAATAGCGAGGAAATACAGCTCCTGCTCGACTATTTTCCTAGATGATAGCACAGTCAGTCAACCAAACCTCAAGTATACAATTAAATGTGTAGCTCTCGCAATATATTACCACATCAAAAACAGGGACCCAGATGGAAGGATGCTCTTGGATATTTTCGATGAAAACCTTCACCCTCTTTCGAAATCCGAAGTGCCACCAGATTATGACAAACACAACCCAGAGCAGAAGCAGATTTACCGGTTTGTTCGGACACTGTTCAGTGCTGCTCAGCTGACTGCAGAATGTGCCATCGTCACCCTGGTGTACCTCGAACGGCTTCTCACATACGCAGAGATTGACATCTGTCCGGCCAACTGGAAGCGGATTGTTCTGGGGGCCATCCTGCTGGCCTCCAAGGTGTGGGATGACCAGGCGGTGTGGAACGTGGACTACTGCCAGATCCTGAAGGACATCACGGTGGAGGACATGAACGAGCTAGAGCGACAGTTCCTTGAATTGCTCCAGTTCAACATCAACGTTCCTTCCAGTGTTTATGCCAAGTATTATTTTGATCTTCGTTCTCTGGCGGAAGCCAACAACCTGAGCTTCCCCTTGGAGCCCCTGAGCAGGGAGAGGGCCCACAAGCTGGAGGCCATCTCCCGCCTCTGCGAGGACAAGTACAAGGACCTGAGAAGACCCACGAGGAAGCGGTCAGCGAGTGCTGACAATCTGACTCTGCCCAGGTGGTCCCCGGCCATCATCTCCTAACCGTGGGCGTCCCTGCCGGAGGCCGTGCCATCCCTCAGTTTCTCCTTTAGTTCGAGAAAAGACAGACGTGGGGTGGTTTTGTTTTGTTTCCCCTCTCCTTTTCTTTTTAATTCATAGCTCCGCCAGGCTGCCTTGATGAGCGCCTCTGGGCTGCGCGCACGCGCAGCAGGGCTCCGAGGACGCGAAGTCGGTGCCATGGGATCCCGTCCACGCCTTCCCAGCCCCGGGTCAGCGCTTCCTTCGTGGAGGAAAAAGACTCTAACCCTGGAGGAGGCAGGGAAGGGACGGGAAGTCGCATAGAGGCAGGGAGCGGCTTGGCCTGGTTCCTAAGTCCCCGTCGGTCAGTAGCCGAACCAACCTGATAGGAGAGCCCGGCATAGGTGACAAAGTTGGATGCGCATTAAAGGCGCGCGCCGCGTTCACCACCCCACCCGGATCAGTATGTCCCGTTAAGACTTCTTGCATTCCTTCTTGCTGCTTCTCGGGGATTTGGGGGGGATTTTTGTTTGTTTTATTCTGTTTTGGTTTTGATCCCACAGAGCAGAGAATATAGTTTGTACCCACCATGGCACAGACATCCAAATAAATAGCACTGGCTGTTTCTCTGCACCACTCCTGCGAGCTGTCTTCTGAGCTTTCTTGCTCTCCAGGGGGGCACTTGTCCCGTGTCTGCGCACCTTTATCCTAGCCGGTTTTCTCCACAGTGGCGGAATCAGCTTGACTGTAGTGCTGAACCAGACGACTCCCTTCCCCCAGCTCCTCCCCCAGGAACATTCTAGATCACATGGGTGCTTGTGCCTTCTGATCCTGCGGTGGTCTCTCTCTCTGCCTGCCCCGAGGGGCAGCCCCTTCCTCGCCCCGCCCACCCCCCTCCTCTACTTCCACGTCCATTGTGCAAGCAATATTCCTCTCAACTTTTATATGTTTACTTCAAATCAAAGTTAGTCTATTTGTATAAAAATTTTTTAAAAATCTAAAATTAAAAAAAAAGGGGGTGGGGTGGGTATTCACATGGAAGATCACTGAAGGGCAAAATGTTCCTATTTACTGAGGTATTTTTCACAGAATGATTGAATAAAAAACAACTTGCATTTTCATTGTGGGTGCTTAGTGAAGTTATATGAAACTAAAGCTGTGAAGGTTTACATGTCATTAATTATGACCGTCCTTTTTCATTTCTGACTATTCTTCATTTCCTTATGGGCCAAATGGAGAGCTTTTGTAGCAAGGAAAATTGAAGGGTTAATGACAGAACCTCACAGTTAAGTCTAAGAATCTGGGTCAGTGAAGCATACAGTGCTTTGGGGTTTGCATATTTTCTCGGGTCACAATGACAGAGGTTTCTAAGTTTTTCTTTCATCAGGTCTTTGAGGCAAATGGCAGTAGATAAATCTGTGTTTTACCACCCTCCTGTGTGAGCTTGGAAAACTCTGGAATCTTACGTTATTTGTCTTGTGCCCTGAACTCATACACCTGCTCCCCAGACATGCCTGCCCCTGAGGAGACATGCTTTGTTAGTGGGAGGGACTCAGAAACAGCCAAGCAGCCCAAGAACACAAAGGCCAGTGCTACTCAGATGGCCCTGAAGTTTGTAGCATGTGTAAACCCAACTGTGTGGGCCAGAAATACTGTTAGATTCTTTCTGGCTTAAACTTTCAAAAGCAAACAAGTGGAACATGGAAAGTGAATTATCTTTCCATTGTAACTGTGTATCAGTATACTCCATATGGGTTCCAAAATCAGCTGCTCTCTTCAAGTAAGATTTGGATTTAGAACATGAAATAGAGACCCCCCAAAAATGTAGAAAATAACATTTTATATTCCCTAAACTATATAGCTTAAAAAGGGACATATTTTCTTAGCTGACTATGAATACCTCTCAAATAAATTAGTTCCTCCCATGTAGAGTATCTTACTTTACCGATCCATTTCAGGAAAGAGGTTTTGCTGCCTTTCAAGCAGACATCTTATTTTTATCCCTTTTATTTGAATGAGAGATTTGAAAATTGAATTATGTAAATATTTCCATGCATCTGCTATTATTTTGTGGAGTTTATTAAAGTACTTTAAAAAATTGTATAGTCTATTTATTGTATGTATGTACCTACAGTCTGCTGACTTACAGTGGATTCCGTAAAGCCTGACTCAGTCTTGCTTAGACTATTGAATATTGTTTTAGCCTTGTGCACTGGATTCTACCTCTGTATAGGAAAATTTTCCATATTCCTGAGCATTGATCTGTATTAATTGGTTATGTTTCTTGCACTGAGGATTTTTAAAACTCTGTTGTAAGTGTAGATTTCAGTTTTGCTTTTGCAGAATGGATCCCTTGACATGAAGGTAATTTAGGTTGGGTTTATTTTTCTACATGATGAAGAAGACTTAAACATTACATTCTCTGGTTTGTTCTAAGTTTGCAAAAAAAAAAAAAAAAAAAAGCCCAACAACACCCAGTACAGTACCTATTGATAAATCATCGTGATGTAATTTGTTTGCAAGGTGGTTCATGCCCTACAATTAAAGCCGGATTGCTATTTAGGAATACATTGTCTTAGTGTAGTTTTTGAACGGGCAGTTTTCATTAATGAAGGGTGAAGAAAACCACACAATTTATTGCCTTTAAGTTTAGATTTGACTTAAAGTCGTTCGGGAGAATAAGTATGCCAATGAATTTTCCCTTTTTGTTTTACGTTTTTTCTTTTAAACTGGGAGAGGCAAAAAAGTCGGATTTAAAACCAACTGGAGCGCAAGATGGGAGGCCCTGCTAAGATGCCAGACATTGCTGTGCCTTAAATGCACCCGCTGGGGCTGTCACCTGGCCCCTCTCCCGGGTCGCCCACCTGCACCACCCCCCAAGCTCCTCCTCTTGGTCTTTGGCAAGACCATCTCCGCCCTGGGCTTTCCTTTGGGTCTAGGGGTTTTGATGCTTGGCTGAGCTGCAGAGCAGAATTTGCTACATAAGTGATTTTGATCCTTCCAGGCTACTTTTGGTAACCTCTCACCTGGGGCCATATTTTACAGCTTTGACATTTTTAAACAATAAGATACAATTCCTGGT EMBV3_16378 AAAGGCTGAATAATACCAAATCCTCATCAGATAAAGTGGATGACCCAGTGTGCAACGTTC Variant GeneID:514213|OBFC1:NM_001076849:129_cdna 466^630 2 EMBV3_29842 GeneID:514213 26 GENE OBFC1 MGC143179 oligonucleotide/oligosaccharide-binding fold containing 1 EMBV3_26734 AGAGGCAGAGAGGACCAGCCAGCAAGAGGAAGAAGAGGATGAGGCTGAGTATTTCCGCCA Gene GeneID:522370|PPAN-P2RY11:NM_001046261:65_cdna Constitutive 1 NULL GeneID:522370 7 GENE PPAN-P2RY11 MGC137466 PPAN PPAN-P2RY11 readthrough EMBV3_40975 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11032 TGTGCTGGAGCCTTGATGGGAAACAAATGATGTCAAACGCACTTGGGGAACTTCTGTGGG Gene GeneID:505355|PECI:NM_001034242:199_cdna Constitutive 0 NULL GeneID:505355 23 GENE PECI MGC128076 peroxisomal D3,D2-enoyl-CoA isomerase EMBV3_06764 TGCTCTTTCCTGAAAATAACTTGGAGGTGCCCGGATGTGTCCATCTACTGCTCTGATGCC Gene BVT0102_034327 + 0 NULL GK000004.2:104644647-104664606 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31446 TACAGTAGGCACCTGTCCTCAGACACACACGCACACCAACGCACTTGCTTATGCACACAT Gene GeneID:781590|CLEC2L:XM_002687066:208_cdna Constitutive 0 NULL GeneID:781590 4 GENE CLEC2L NULL C-type lectin domain family 2, member L EMBV3_24195 CCACTGCAACACCACCACGGATATCAAGGAGGCGAATTTCTTTGGCAGCAACGCTCAGTA Gene GeneID:100337303|LOC100337303:XM_002685757:538_cdna Constitutive 0 NULL GeneID:100337303 2 GENE LOC100337303 NULL WD and tetratricopeptide repeats 1-like EMBV3_13431 ATGCTCCTCTTCCCCAGAGCAATCAGACAAGAAGAACCAGCAAGACAGAAGCCACAGTCT Gene BVT0102_104137 - 1 EMBV3_38799 GK000010.2:396436-555338 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018657 1 XLOC_009340 NonCoding TCONS_00018657 XLOC_009340 NonCoding NonCoding - 10:415418-415778 - TSS12547 360 0.577777777777778 1 0 0 0 0 0 0 0 0 0 0 0.000560027953549042 0 0 0 0 0 0.000146731122164333 0 0 0 0 0 2.06129698998964e-05 0 0 0 0 0 0 0 0 XM_005221228.1 MFSD11 PREDICTED: Bos taurus major facilitator superfamily domain containing 11 (MFSD11), transcript variant X1, mRNA. 4e-13 78.8 72.41 0.383333333333333 NM_138700.3 TRIM40 Homo sapiens tripartite motif containing 40 (TRIM40), mRNA. 3e-08 62.6 76.92 0.247222222222222 0 noncoding GTGGATAGAAGACTTCAGTTCCTTCCTCACTGTTGATGTTAAGTAACCTCTGCTCCTTCCTGATGCTCCTCTTCCCCAGAGCAATCAGACAAGAAGAGCCAGCAAGACAGAAGCCACAGTCTTTTGTACCATGATCTCAGAAGTGACATCCATCATGTTAGCTGTATCCTGTCCTTGAGAAGCAAGTCCCAAGATCCCGCTGACACTCCAGGGGAGGGGATTACACAAGGGTGCCACTGCTGGGAGCCTGGGATCAGTTTTAGAAGGCTACCTGTCGCACTTTCTGACTTTTATAAGCAGTGCTGTGGTGAATGTTCTTATATATGCATCTTTCAAAACCCCTTCTGATGTGGGCTCAGT TCONS_00012283 . 3' 163001 TCONS_00012283 . 3' 163360 EMBV3_11455 TTGTAATACTAAATGTGTTACCATACCAAGGTCTCTAGATGGTCGTCTTCAGGTGTCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09137 CATTAACAGCCTGTTACAAGAATGGAAAGGATTATCCCAGAAGAGGTTCAAACCATTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09693 AAATTCCTACTGGTAGCCATCCCTTCCCCCACTTCCAGCCCCTGGGAAACCACTGAGCTG Gene BVT0102_440439 + 1 EMBV3_36881 GK000018.2:39571581-39615296 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21546 GACTTGCCTAAGAGGCCCAGGCCCAGAACGGAGATGTTCCTGCTCATATATTTGGCATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17847 CTCAGAGTGTGGTTATGTGGAGATGAAGTCACCAGCGCGGAGAGATTCCCCATATGCAGA Gene GeneID:539136|MEGF10:XM_002688976:4_cdna UTR3_Alt 2 NULL GeneID:539136 7 GENE MEGF10 MGC128464 multiple EGF-like-domains 10 EMBV3_13725 GTTCACGAACAAGTGCAAAGGCTCTCTATGAACAAAGGAAGAATTATGCACGGGACAGTG Variant GeneID:538419|EPS8:NM_001076102:47_cdna 456^506 2 EMBV3_29428 GeneID:538419 5 GENE EPS8 MGC137738 epidermal growth factor receptor pathway substrate 8 EMBV3_37022 TGAATCAGGAGCCAACAGCTTCAAAGTACTGTTTCCATCAGGGACTCCTTTGCCAGCTCG Gene GeneID:534751|HSPA14:NM_001046388:121_cdna Constitutive 0 NULL GeneID:534751 13 GENE HSPA14 MGC134011 heat shock 70kDa protein 14 EMBV3_34785 AAACACTGGCTGAGTTCCTGCAAGGCCGCCTTAGCCTCGTGTTTTGGACGGAGGAATTTA Gene BVT0102_337549 - 1 EMBV3_21710 GK000011.2:105757254-105790353 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31202 GCCTGCAAGGAGGCCCAGCAGACAGTGATAATAAAGACCATTGATGAGCTAGTGGAAAAC Gene GeneID:519952|LOC519952:XM_002687083:302_cdna Constitutive 0 NULL GeneID:519952 4 GENE LOC519952 NULL similar to monooxygenase DBH-like 2 EMBV3_05293 CCAAAAAGCTGTCAGGGCAATGGCAGTGTTGACTGATCACCCCTATGCCTCCCTGACCCT Gene GeneID:540386|DDAH2:NM_001034704:192_cdna Constitutive 1 NULL GeneID:540386 23 GENE DDAH2 MGC128823 dimethylarginine dimethylaminohydrolase 2 EMBV3_43024 CATCAAGCAGAGAAGAGGGATTTCCCTGGTGCTCCCAGTGCAGGGGTTCTGGGTTTGATG Gene BVV0101_051244 + 0 NULL GK000030.2:128692481-128771953 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06551 GGCGCCATCTGGAGTACTACTTGTTACACTGCACACCCACCGATTCTCAGGATTCCTTAT Gene GeneID:520924|NUP205:NM_001130931:14_cdna Constitutive 0 NULL GeneID:520924 4 GENE NUP205 NULL nucleoporin 205kDa EMBV3_39850 AAGTCTGTTCTAAACTGAAAAACCGGACAGCTGGAGTACCACATGGCGTGACTGTGTGGT Gene BVT0102_430845 - 1 EMBV3_08376 GK000009.2:13235994-13276981 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27949 AATGCTTCCAGAACAGCACCACCATCTAGCGGCGGTTTGAGACAACCATCCTGTTGGCAA Gene GeneID:538567|TNFSF13:NM_001034647:87_cdna Constitutive 0 NULL GeneID:538567 19 GENE TNFSF13 APRIL MGC128565 tumor necrosis factor (ligand) superfamily, member 13 EMBV3_39454 AGCTAGGCAGGCTGGAAGCTAGGCCGTTACACGCAGACGGACGTTTTAAAGCCGTAATAT Gene BVT0102_396708 + 0 NULL GK000025.2:25082603-25139416 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05173 GATGAAGCAGTATGGGCAACAGATGGACCCTTCGACGCACCCCAAGAACTTTGTACGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03018 GAACAGCCAGTGTGACATAGGCCATGGCATAGACATGGCTACTGTACTTTGGGAGAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20641 CCTCGAGCCGCTGGACGAGGATCTCTTCAGGGACCCGGAGCTCCAGGAGAGGTACCGAGT Variant GeneID:504360|ACOT8:NM_001075157:835_cdna 208^570 1 EMBV3_26295 GeneID:504360 13 GENE ACOT8 MGC140184 acyl-CoA thioesterase 8 EMBV3_14015 GCCAGCCACGATGTCGTGTGTGACTTAACGCCTTTCTCTGCTGTTAACGCTAACGTGTTA Gene GeneID:282369|SLC7A5:NM_174613:57_cdna Constitutive 0 NULL GeneID:282369 18 GENE SLC7A5 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 EMBV3_31124 AGCGGGCGCGGATACCATCCGGGAAGGCGGGTGCTGGTCGCATAGAGTTATGTTCTGGCT Variant GeneID:535065|CUTC:XM_002698425:384_cdna 218^289 2 EMBV3_39091 GeneID:535065 26 GENE CUTC NULL cutC copper transporter homolog (E. coli) EMBV3_18031 TGTCTGCTGGCAGTGAGAGGCTGAAATGACTGGCCAACTTAAGCCAAAGCTGTAAACAAC Gene GeneID:614540|TIAL1:XM_002698539:32_cdna UTR3_Alt 2 NULL GeneID:614540 26 GENE TIAL1 NULL TIA1 cytotoxic granule-associated RNA binding protein-like 1 EMBV3_40993 CTGCTTTCGTTTTGAACTGTGCTTGGTATCGCCTGCAACTGCTAGGTCTTTGTGCTGTGG Gene GeneID:100295814|LOC100295814:XM_002685311:150_cdna UTR3_Alt 2 NULL GeneID:100295814 2 GENE LOC100295814 NULL similar to homeobox D8 EMBV3_27693 AGGAGGCGGCGCTGAGCCTAGAAGGAAGAGGCCGCCACCCACCTCCCACGATGGCTCTGA Variant GeneID:541003|UBE2D2:NM_001046496:32_cdna 187^467 1 EMBV3_32752 GeneID:541003 7 GENE UBE2D2 MGC138112 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) EMBV3_36886 AATCCATGGTTCGGCTGTCTTCGGTTATAAGGGCTGGCTTGCTGGGTACCAGATGACCTT Gene GeneID:784294|LOC784294:XM_002687668:10_cdna Constitutive 0 NULL GeneID:784294 5 GENE LOC784294 NULL similar to voltage-dependent anion channel 2 EMBV3_41336 CTCTATGCTCTCTATGGAAAAAGTGGCAAGATGCCCGTGAAAGATGAGAGAGGTGACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37867 CCCAACCAGGTGGTGGAAGGATGTTGTTCAGATATGGCTATTACTTTTAATGGGCTGACA Gene GeneID:523130|LOC523130:XM_002685013:161_cdna Constitutive 0 NULL GeneID:523130 1 GENE LOC523130 NULL similar to C1GALT1-specific chaperone 1 EMBV3_26256 TGTTCACCAGCACCGGCTCCAGTGGGCTTTATCTGGAGGTTGATTTCTGGAAGAATAATT Variant GeneID:100125312|UBAC2:NM_001103344:2_cdna 72^199 5 EMBV3_14291 GeneID:100125312 12 GENE UBAC2 MGC142780 UBA domain containing 2 EMBV3_17261 CACGCCTAGAGGTGAAAACGCTACTGTAAACCAGAGACCTGCAAACCCCTCCAAGACAGA Gene GeneID:504615|FETUB:NM_001034218:48_cdna Constitutive 2 NULL GeneID:504615 1 GENE FETUB MGC128051 fetuin B EMBV3_17296 GAGGGGGGCAACATGTTTTTCAGCCTAGAAGGAAGATTACACTGGTTTGGACAGTATCAC Gene BVV0102_110143 + 0 NULL GK000005.2:54108760-54238192 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39406 CAGAGGCGGAGCCTGATGATTTGAATTTCGAGCATGTTCCCAAGTGATGCTTTGCTGCTG Gene BVT0102_251262 + 1 EMBV3_02456 GK000021.2:33878147-33903349 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28483 CTGAGCCAGCTTCAGGACTTTTCATCACCGAGTCTGGACATTTGCTGTGTCTGAAGGAGA Gene GeneID:100336965|LOC100336965:XM_002699499:66_cdna UTR3_Alt 2 NULL GeneID:100336965 X GENE LOC100336965 NULL odz, odd Oz/ten-m homolog 1-like EMBV3_19601 CCGCCAGCACTGAAAACTGAGGAGCGCAAGCTCGTTCAGGCCTTCACCCACGCTCCTGCT Variant GeneID:539220|AHSA1:NM_001034666:129_cdna 656^784 1 EMBV3_19858 GeneID:539220 10 GENE AHSA1 MGC127487 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) EMBV3_18783 TCTGTCCCCGACTGGGCCATCGTGTTGATCACTCTCTCTTTGGTAGCAGCAATTGTCAGT Gene GeneID:100295595|LOC100295595:XM_002697353:325_cdna Constitutive 0 NULL GeneID:100295595 23 GENE LOC100295595 NULL hypothetical protein LOC100295595 EMBV3_27770 CACATCAACTCATAGAAAATGGGTGAAAGTGGATGTGGTAATACCAGAAGAACTGAAGAC Gene BVV0101_065320 + 1 EMBV3_02176 GK000013.2:20975353-20992708 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042208 TCONS_00042211 TCONS_00042204 TCONS_00042214 TCONS_00042197 TCONS_00042198 TCONS_00042210 TCONS_00042215 TCONS_00042212 TCONS_00042200 TCONS_00042206 TCONS_00042196 TCONS_00042199 TCONS_00042202 1 XLOC_025618 Coding TCONS_00042200 XLOC_025618 Coding Coding LOC524240 13:20760192-21109505 j TSS31471 3949 1 TCONS_00042200_12 951 0.0382375284882249 26 0.98876935232686 0.00212992466969654 7.34698318469847e-11 0.000829352919090965 1.11982427164496e-06 0.00198446083698563 0.000390806182411483 0.000847847072231015 0.00225326948421451 0.000292393487439006 0.000173726235585157 5.01182431219136e-08 1.08512679347097e-26 0.00125318893738582 7.20704255637233e-09 1.91710674750751e-05 5.7712656081251e-07 1.93310695229271e-09 5.40792272480083e-24 1.93344832938488e-07 4.16028602215714e-05 7.68227563206664e-13 4.61516645603602e-124 3.48836730768925e-21 0 0.00233435194679762 0.00128436485271361 0.00109398249808462 1.39745860431333e-31 9.9783525337359e-08 1.0404911133974e-07 NM_001099190.2 MGC152301 Bos taurus uncharacterized LOC783682 (MGC152301), mRNA. 0.0 1635 99.67 0.231451000253229 XM_005252651.1 C10orf112 PREDICTED: Homo sapiens chromosome 10 open reading frame 112 (C10orf112), mRNA. 0.0 1844 83.43 0.439858191947328 TCONS_00042200_12 sp|Q5VYJ5|CJ112_HUMAN CJ112_HUMAN MAM and LDL-receptor class A domain-containing protein C10orf112; 3e-159 510 79.66 0.309148264984227 0 coding 0 0 0 0 -0.145815443770699 0.43909058353021 -0.0269811012278478 0.561757471163894 CTGAGACTCTAGAATTGATTTGAGGAGGGAGTGGGTTGAGTGAAAGAGAAATCTGATCTAAAAATACAGGGTCTGTAGAGATGATTTTGCATCTAAGGGTATTTTCATCATAGCAGCTAATTTCTACTGTTATGGACTGAATGTTTGTGTCCCCTCAAAATCCATGGATTGAAATCCATACCCAGCATGCATCAGAGGAAGTCTTGTGAGGACCTAAGAGGAAGACATCCCTCAGCGAGACCTGGGCCACACTGGCACTCTGACCTTGGACTTCCAGACTCCCGAACTATGTCCAAATGGACTAAGACATGGCAAGAAGTTTTCTGTTAATGCCGCCTGGTGACCTCCTTGCCTATGCAACCATCCCTACGCCACTGGGAGGTGAGATCAAGCTTTTGGAGCACTCTTCCGTGTTTTGTAATAATATCAAGCAGCCTGTCCTGGGGCTTCCTCCCTCCCTCCCTCGCCTCTGCACTCTTGCCAAAGAACAAAGGACAAAGGCTTCCCTGGTGGCTCAGCATTTGGTGACACTCTTCTCTAGCTGGTTGGCTCCCCCGACATTACAGCAGAGGCTTTTGATAAGACAAAGCTGAATTTATTGCTTACCATGGCTCGGATTATGAAAGATGTGATTTTGAGGATGGGCTTTGTAGTATGATACGAGATCAGAGTCTGCGACTTGGCTGGACAAAGAGGAATGGGCTGATCGGCCAGTCACCTCCATTTTATGATCACAATGGTGATATGTCTGCTCACTTCCTCTCATTGGTCTCTGACTTGGATTCTACTTCCTCAAACATAAGCAGCAGAGTTTTTCTTCCAACGAATAACCAGCATGCTTGTCAGATTACGTTTTATTGCTTCTCCAGCCAAATGAATGGCAAATTAATGGTTGGCTTTCAAACTACCTGTGGTGGCCCTATACAGCATTTATGGCAAAACACTCCTGGGCTCCAGAATCGTTGGGAGAGGAATGTCATCAAAATTCAGAGTCCCCAGAGGTTTCAGGTTATTTTTCAAGGCCAGATGATTTCAGCTCAGGATGAAGTCATAGCTATTGATGATCTATCTTTCAGCTCAGGCTGCTTGCCAGCAGATGATGACATTTTGCCATGTCAAGAGGCATCAAATACCGAGAAGGAACTATGCCATCCAGATAGAAGTCTCTGCAGATTTGATTCTACAGATGAAGGATTGAGGTTGTGTCAAGCCTGTGGATTTGCATTTGACATGTGTGACTGGGTATCAGAAGCAACTGCTGGGCAAACTTCCTGGATGCGCACAAAAGCAAGAGAAATTCCTGTGTTAGAAAATGCACCTCAACAACATCAAAGCAGTGATGATGAAGGTTACTGTCTATGGATAGGGGCTAAGCAAGCTTCTACTCTTAACCATTTAGACAGCAGGGCTTATCTGAATAGCTCCGTGTGTCACTGCCTGGGCAGGAGCTGCCATCTTCAATTCTATTACGCTATGGAAAACAGTGTTCTCAGAGTAGGACTGTCTAATGATAAGGAAGAAGAAACATTTTGGATATACAACACATCAACTCATAGAAAATGGGTGAAAGTGGATGTGGTAATACCAGAAGAACTGAAGACATTCAAGATTATTTTTGAAGGAACTGTTTTGAGCCACAAAGGTTTTATTGGGCTTGATGACCTGTGGGTCTACGCCTGTGCCCAGGCCCCGTCCAGACAACTTTGCTCTGCAGATGAATTCACCTGTGGCAGCGGCCAGTGCATTGCTCGAGAATCGGTCTGTGACTCTTGGCAGGACTGTTCTGATAAGAGTGATGAGGACCTGACAACTTGCTCCAGTCATCTCAGGTGTGACTTTGAGTCTGGTTTCTGCGGCTGGGAGCCATTTCTCACAGAAGATTCACACTGGGAATTCATGAAAGGGTTGCCCAGTGCAGACCACCATCTTCCTGATGCTGAGTACCCAACAAACACAAATCATGGATCATTTATTTATTTTGGGGCACATCAACCACCTGCAGTGGCCAAGCTTGGAAGTCCTGTTCTTACAAAATCAGTCACTGCCTCTACCCCATGTCAGGTGCAGTTTTGGTATCATTTGTCTCAGCATTCACGTCTCTCGCTTTTTACAAGAACATCTCTGAATGGGGATTTGCAGAAGCACAGTGATCTAATCGGAATCTCTGAATCTCAATGGCGACAAGCAAAAATCAATCTCATTGCAAAGGCTGGAGAATCTACTCTCCCTTTTCAGTTAATTTTGGAAGCTACAGTTTTATCATCAAACGCTACTGTTGCTCTAGATGACATCAGTGTATCCCAGGAATGTGAAATTTCATATAAGACACTTCCAGGTACTAGTGTACAAAGCAAAGCTGGACTTGCGCCACCTGAGGACGCAGGCTGGACTTCATCCAGCAGGGTGCATGATTTCACGTCTGACTGTCCAGATGGAGCAGAGGAAGCTAACTGTGTTACCGAATGTGACTTTGAAACAGATAGCTGTGGTTGGTTTGAAGCAGCCCGTGGTGATGATTTTGAGTGGACCTGGAGCTCTAGAAGTAACCTCTCTGCTGAATTTGAGGATCAGGCTCCACCTTGGGATCACACTCACAACACATCTCAAGGGCACTTTATGTTCATTCTGAAGAAAAGCAACAGCTTATCACAAATTGCTAGACTCCAGAGCCCAACTTTCAGCCAGACAGGACCTGGATGCACTCTTTCCTTCTGGTTTTATAACTATGGCCTATCAGTGGGGGCAGCTGAGTTACAGCTACACGTGGGAAATTCCAGCGAGTCCACGGTACTCTGGAGAGTATTGTATAACCAGGGTGACCAGTGGTCACGGGCAGTTGTTCAGCTTGGACGTCTTACTCAGCCTTTCCATTTGTTGCTACATAAAGTCAGTCTTGGCATTTATGTTGGTGTCTCAGCTATTGATGATATCAGATTTGAAAATTGTCTTCTTCCACCCCCCTCAAAGAGCTGCAAAGAGCCAGATCATTTCTGGTGTCTGCACACTAGGATTTGTGTAAAAAAACTTCAGTTATGCGATCTGGTGGATGATTGTGGTGATTATACTGATGAGGTCAATTGTGTACCTGAACTTCAGTGTAACTTTGAAAATGGAATTTGTAACTGGGAACAAGATACAGAAGATGATTTTGACTGGACCCGGTACCAGGGCCCAACATCAACGCTTAATACAGGGCCGATGAAGGATAACACTTTGGGCACAGCTCAGGGACACTATCTGTACATCGAATCTTCCGAACCACAGGTTTTCCAGCACCGAGCTGCTCTGCTCAGCCCGATCCTTAACGCCACTGATGCGGAGGGCTGCACCTTCCGCTTGTACTACCACATGTTCGGAAAGCACATTTATAGGCTGGCCGTCTACCAGCGAGTCTGGAACAACACAAGAGGACAGCTGCTGTGGCATATATTTGGGAATCAAGGCCCCATTTGGATACGGAAATCTCTCAACCTTTTCAGCAGGAAGCCTTTTCAGGTCATTTACCTGTGAACCTTCCAACTCCACCAGAAACTACAGTTCCAGTAACACTGCCTCCACACAACTGTGCAGACAGTGAATTTGTTTGCAGGTCTGATGGTCAGTGTGTTGAAAATATCCAGAAATGTGATTTTAGATATGACTGCCCTGACCAATCAGATGAATCCTCCTGCGCTATGGACATTTGCAGTTTTGAGAAAGGAAGCCTGTGTAAATGGTACCAGCCAATCTCAGAAAAATTAATTAAAGATTCAAACACATTCAGATGGGGACTTGGTAATGGAACCAGTATTCATCATGGTGAGGAAAATCACAGGCCATCGGTGGATCATACAACGATGTACATACTTATGTCTCCCAACTGTGAGAAGACGTTTTATTGACATGAGCTAGAGAGGAAAAAAGCAGAGATATCACTTTGCTGACAAAATCTGTATAGTCAAAGCTATGG EMBV3_21244 AGGAACAGGAGAACAGGTACAATCCTATTCATGGGACGAGTCATGCATCCTGAAACCATG Gene GeneID:509976|SERPINI1:XM_002684945:192_cdna Constitutive 0 NULL GeneID:509976 1 GENE SERPINI1 NULL serpin peptidase inhibitor, clade I (neuroserpin), member 1 EMBV3_00127 AAGCTGAGTGCCATCCATCCTTCTGCAGACAGTGAGAACCAGCCTGATGACAATAATAAA Gene GeneID:533087|EZH1:NM_001102151:163_cdna Constitutive 2 NULL GeneID:533087 19 GENE EZH1 MGC157156 enhancer of zeste homolog 1 (Drosophila) EMBV3_14427 ACCAAAGTTCTTACCTTGGCATTTGAAGTCCTTGCACAAATAGCCCCCAACCGTCCCTCC Gene BVT0102_027856 + 0 NULL GK000021.2:25624704-25651049 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123245 1 XLOC_074799 NonCoding TCONS_00123245 XLOC_074799 NonCoding NonCoding - 21:25649833-25650535 - TSS92004 702 2 TCONS_00123245_2 71 0.383190883190883 1 0 0 0 0 0 7.03302209454429e-06 9.68148454041882e-05 0 0 2.24789339888625e-05 0 0 0 0 0 0.000125800259505327 0 0 0 0 0.000276592546184906 8.64880255387683e-06 0 0 0 0 0.000250906920740886 0 0 0 0 XR_228721.1 LOC101904823 PREDICTED: Bos taurus uncharacterized LOC101904823 (LOC101904823), 3e-43 179 85.09 0.226495726495726 0 noncoding 0 0 0 0 -0.477768956617638 0.256266394745683 0.104076038898057 0.28136435695033 GGCATGGGGACAAGTATAAAGTCTGGAGGGACGGTTGGGGGCTATTTGTGCAAGGACTTCAAATGCCAAGGTAAGAACTTTGGTATGTATCCTCCTTAACTGTGTGTTGAGCACCAGTTCACCATTCAGCCTGTGCAATTCTCACAGGGAACCCATGGGAAGGTGGTCTTATTCTCCCCATTTTGCAGCTAAGCACACGACAGACTTTTTGAGTAGGTGAACCACGGGAGAAAATTCCTTTAAATCCTGTGTATATTCAATAGTTAGTGCTCAGTCTCTCTGTCTTTGGGACCCCATGGTCTGGAGCCCACCAGGCTCCTCTGTCCGTGGTATTTTCCAGGCAAGAATACTGGGGTGGGTTGCTATTTCCTTCTCCATGGGATCTTCCCGACTCAGGGATCGAATCTGCGCCCTCCGCATCTCCTGCATTGCAGGCGGACTCGTGTATATTCAGTAACAGCAACTAACTGTGCCCTAATAACAACTAGATGACAAAAAATTGCACAAGTAGGGTAGGTGCAGAACCCCGACGTCGGTACGGTGTACGTGTAGTGTTATTCACGGTCGCCTCTTTCGGCGGCAAGCCGAGCTCCAGCATCTCTAAAAGCCAGAGGTCGACCCCTCAGCCTGCCCAGTGTCGCCCGCTTCGTCCCATTTCCGCAGGTCTCGGGTGGGGAAGGGGAGGCCCAGGACCCCACAGAT TCONS_00118916 TCONS_00118917 TCONS_00118918 TCONS_00118919 TCONS_00118920 TCONS_00118921 TCONS_00118922 TCONS_00118923 . 5' 515 TCONS_00118916 TCONS_00118917 TCONS_00118918 TCONS_00118919 TCONS_00118920 TCONS_00118921 TCONS_00118922 TCONS_00118923 . 5' 515 EMBV3_39789 TCCTCAATGTGTCTGCCCCTCGCCTCCTGTCTGCCTGTGCGCTTAAGAACTCTTGTCGGC Gene BVT0102_038877 + 0 NULL GK000021.2:67399009-67416604 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05999 CTGAACAAGTCTTCTGCAGATTTTAGTCCAAGTCCAGAGCCACCATCAGTTACTTTGAGT Gene GeneID:506574|LRIG3:XM_002687553:563_cdna UTR3_Alt 2 NULL GeneID:506574 5 GENE LRIG3 NULL leucine-rich repeats and immunoglobulin-like domains 3 EMBV3_39301 GCTAGCCTGCGTGGATATCTCTTTCAACAAGGTCATGGTGGCCATCTCAGGATTTCTGGT Gene GeneID:523634|LOC523634:XM_002687126:481_cdna Constitutive 0 NULL GeneID:523634 4 GENE LOC523634 NULL similar to olfactory receptor 450 EMBV3_04338 TCTGCCCTCCGAGCTTGAGCTATGTGAACAGGTGTTTGGGCTTTCAACCTCATCTGTAGC Gene GeneID:614489|PRSS16:NM_001076330:143_cdna Constitutive 0 NULL GeneID:614489 23 GENE PRSS16 NULL protease, serine, 16 (thymus) EMBV3_37111 TTATGGACAGTTCCACAGAGGCTCCTCCCATCTCGATCAAGTCCCGCACCCATTCAGTGT Gene GeneID:510354|RLTPR:XR_083913:962_cdna Constitutive 0 NULL GeneID:510354 18 PSEUDO RLTPR NULL similar to RGD, leucine-rich repeat, tropomodulin and proline-rich containing protein EMBV3_27607 TTGATGAGAGAAGGAAGAAAGTAAAGCTCGATCGAACGCCTGCGAGAAGAGGGTTCCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29682 ACCAGCTTCGAGGCCGCGCCGTCTCTGCAGGCTGCCATGGCTGCCGTCGACAGCTTCTAC Variant GeneID:505213|HSDL1:NM_001098871:11_cdna 83^137 3 EMBV3_15563 GeneID:505213 18 GENE HSDL1 MGC152451 hydroxysteroid dehydrogenase like 1 EMBV3_20818 TCAGTTTTCTGTGATTCTCGAAGTGTGACCCGAAACCAGCAGCATGAGTGAGCATCTGGC Gene BVV0102_210307 + 1 EMBV3_10804 GK000015.2:39367000-39529626 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26556 ATGTGGGCAGACTGCCACAGTCCTCAATAGGCTGGTTATAAGAAAAAATTATGGAAAAAG Variant GeneID:540278|MRPL35:XM_002691361:207_cdna 255^399 2 EMBV3_26773 GeneID:540278 11 GENE MRPL35 NULL mitochondrial ribosomal protein L35 EMBV3_39712 TTTGATTGAGAGGAAGGAAACTAACCGAAAGCTAAATTGCCTCCAAAACCATCGTCAAGA Variant GeneID:534337|SH3YL1:NM_001034607:2_cdna 245^413 2 EMBV3_41081 GeneID:534337 Un GENE SH3YL1 MGC128888 SH3 domain containing, Ysc84-like 1 (S. cerevisiae) EMBV3_28848 CCCACACCCACTACTGCCCCCGGACTACCCTTGAAGCCGATCTTCAGAAATCAATAATAT Gene GeneID:518746|DLL4:NM_001075779:157_cdna Constitutive 0 NULL GeneID:518746 10 GENE DLL4 NULL delta-like 4 (Drosophila) EMBV3_07944 TGTTCAGCTTTCCTTCGCCATATAGTGCCAACCTTGGGCTCTCCACAGGAGTTGATCTTC Gene GeneID:781968|LOC781968:XM_002687338:5_cdna Constitutive 0 NULL GeneID:781968 5 GENE LOC781968 NULL similar to olfactory receptor MOR160-1 EMBV3_02397 GGTCCTCCACTACCAGGCTCCGATCCCCTTCCAGAACTAGGTGGTGATTTTTACATCTCT Gene GeneID:529760|ADORA2B:NM_001075925:69_cdna Constitutive 0 NULL GeneID:529760 19 GENE ADORA2B MGC138933 adenosine A2b receptor EMBV3_03443 TCAATACGATTGGAACCAGCACAAGTACAAATGTTCCAGCCTGGTTAAAAAGCCTCCGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41801 ATGTCTGGAAATACTGCTAATTTGAAACTGATATATTACATGGAACTATTTCCACCTTGG Gene BVV0102_214875 + 0 NULL GK000012.2:32322822-32352253 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38906 AAACCGGTCAAAACAGTGAGGTTCCAGACCCCCGGACGCTTTTCATGGTTTCGGAAGCGC Gene GeneID:616838|CCDC8:NM_001035485:400_cdna Constitutive 0 NULL GeneID:616838 18 GENE CCDC8 NULL coiled-coil domain containing 8 EMBV3_29405 ACAGCCTCGCTTTCACTGCCACAACTGTCTGGTTTGTCTCTTGCACCCTCATCTCCTGTT Gene GeneID:615679|FLOT2:NM_001035466:160_cdna Constitutive 0 NULL GeneID:615679 19 GENE FLOT2 NULL flotillin 2 EMBV3_18364 GGTAGTTATTTGGTAAGCAAATCAATATAACCAGCAAAGGATGTCTGCTTCTTCTCTATG Gene GeneID:614583|SERTAD4:XM_002694266:262_cdna Constitutive 2 NULL GeneID:614583 16 GENE SERTAD4 NULL SERTA domain containing 4 EMBV3_20605 GGCAGATCAAGATTTGGGAGGTACAGACAGGTAAACAGATTCAGGTGTTATCGGGCCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13602 CTCGGAGGAGTGTATGGAGAAGTGTGAGAGTCTGTGTGTTTGAGAGATGCCGAATCAGCC Gene GeneID:100138286|CABLES1:XM_002697726:55_cdna Constitutive 1 NULL GeneID:100138286 24 GENE CABLES1 NULL Cdk5 and Abl enzyme substrate 1 EMBV3_00933 CAGCTGGAATATCAGGAATTGTACCTTCGCCCTTAAGCACTTCTGAATTCTTCTGTTCTC Gene BVT0102_094012 + 0 NULL GK000009.2:39820553-39845874 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237121 TCONS_00237120 1 XLOC_144651 Coding TCONS_00237120 XLOC_144651 Coding Coding GTF3C6 9:39844701-39856105 j TSS177350 2199 1 TCONS_00237120_2 197 0.368804001819009 6 0.807682188897659 0.000355128396883094 0.000674459584353163 0.000182180012774991 0.00109835547232864 0.000140949862830525 4.60463449176686e-05 0.000838837353220941 0.000242741454233636 0.000398298096789041 7.28159119646458e-05 1.45969220864258e-08 7.13567463485286e-11 3.91198587028291e-05 4.07175664395617e-11 1.5673349547059e-11 0.00239602502906066 0.0017122503085493 0.000366107833686202 0.000589550168835815 0.000127082106474823 2.89902318141657e-05 0.00290991071637185 0.00248062687327671 0.00228141725070849 0.000174091804882762 0.00041912773136342 0.000104415927542776 4.72385405218661e-05 0.000125614871655973 0.000241882906964915 XM_596663.6 GTF3C6 PREDICTED: Bos taurus general transcription factor IIIC, polypeptide 6, alpha 35kDa (GTF3C6), mRNA. 0.0 3745 100.00 0.943610732150978 NM_138408.3 GTF3C6 Homo sapiens general transcription factor IIIC, polypeptide 6, alpha 35kDa (GTF3C6), mRNA. 0.0 892 89.24 0.311959981809914 TCONS_00237120_2 sp|Q969F1|TF3C6_HUMAN TF3C6_HUMAN General transcription factor 3C polypeptide 6; 3e-111 321 85.87 0.928934010152284 1 coding 0 0 0 0 -0.215192868463476 0.0882757400220234 -0.0193014933849907 0.764991308572523 AGCCTTACGGGCCACACGGAAGTTCTAGGTGGAAGGAGGGAGGTTACCTTCGTTAACGGAGCGCGCTTCCTCTCCTTGAAAGCAGGACCTAGTTTTCACAAAAGTGGAGTCGTTTCACTGCGGGAGCAGCTGGTTATGGTGGAATTATCAGGAATTCTTGATTCAGACTTGCTCTCAAAATGTGAAAATAAATGCAAGATTTTGGGAATTGATACTGAAAGACCCATTCTGCAGGTGGACAGCTATGTCTTTGCTGGAGAGTATGAAGACACTGTTGGGACCTGTGTTATATTTGAAGAAAATGTTGAATATGTGGATGCAGAAGGCAGTAATAAAACTGTGCTAAAATATAAATGCCACACAATGAAGAAGCTCAGCATGACAAGGACTCTTCTGACAGAAAAAAAGGAAGGAGAAGAAAACATAGGTGGTGTGGAATGGCTGCAAATTAAGGAGAATGATTTCTCCTATAGACCCAACATGATTTGTAATTTTCTGCATCAACATGAAGAGGATGAAGCTGTAGCTCCAGACCCAGATAAATCTTTGGAGTTGGAAGAGCATGAGACTCAAATGAAAGACAATTCAAACCTGAGTTTTGAACAGGAGAAACCACCGAACTTGGAAATAGAGGATTCTGGTCCTCTTATTGATATCCCTTCTTTTGAGACAGAAGGGTCTGTTTTTATGGATACTCAAGAAACTGCCATAGAAATCACTCCTAGATGAAATGTTTCTCATAATAACTAGTCATGAACTTTTTATAGAATTTTTATATAAAATAATTGACTTTGTAGTTCACAGTTTTTACTTTTGTTAGCTATATATGCATTTCCAGTTATAATGTAGTTTAATATACTAGAATCATTAAGGACTGAATATGAGTTTTAAAAAATATGGTTTCAAGGACTATAGGGACCATTCTGTGATGAGTCCTTTAAAATGGAGGTTTTACTAAGGTAAGTTAAGTTTCTGTTGCAGCCATTGCAAATTACCACATTTAATGGCTTATGTGTATTAAGCTACAGAAGTGTATTGTCTTTCACAGTTTTGTAGGTCAGCTGTTTGAGATGGGTCTCACCTGGGCTAAAATCAAGGTATTTGTAGAACTTCTCTTCTGGAGGTGGGATGGGGGACTCCATTTCATTGCTCATTCAGTTGTTTACAGAATTCAGTTCTTTGCAATTGAAGGATCATGGTCCCATTCATTTCCTTGCTGTTGGCCAAGAGCCATTCCCATATTCCAGAGGCTGCCTGCATTCCTTGACTCATAGCTCCTTCTCTTCAAAGCCAACCATGGTCAAGTTCCTCTCAGTCCTTGACTCTCTCCTGCTACTTCTGTCATCCTATGGATGTTAGACCCTTCTGTCTTTATTTGATTACATTGGGCACATCTGGCTGACTTCCCTATTTTAAGGTCTGTAACTTTAATTCCATCTGCAAAGTCCATTTTGCCATGTAATTTAAACAGGCATAACTGAAAATTATGGCATGAAAATACTTGGGGGGGGGGACATCTTCCAGTCTACCAACATTGATATTACAATTCTGAGAACAGAAGAATTCAGAAGTGCTTAAGGGCGAAGGTACAATTCCTGATATTCCAGCTGTAATTTCACTCCTTTCACTGAAGAAAGATGATTGGAATTCAGCTGTAACAGTCATTTTACTACAGTGATACAACATTGTAAAGCCATTATCCTCCAATTAAAAATTAAGTATTATGGTGATAAGCTACATCTGCTTTAACTAGTATTTTTTAAAGTAAGTTATTCCCAAACTTTGATACAGGTTGATCTATATGAAATTGCCAATATTTGTTTCTGACTATAAAACCCAGCCATTTTATATGGTTTATGCTGGTATAAACACACCTCACATTAATTATATCTCATAGTGCTCTGTGATGCCCTAGAGATGTGGGATGGGTGAGTGGGAGGGAGGCTCAAGATGGAGGGGATCATGTATGCCAATGGCTGGTTCACATTGTGTGGCAGAAACCAGCACACTGTTGTAAAGCAAGTATCCTCCAATTAAAAATTTTAAAAAATTACACCTCTCAACTGTTGGAGGTATAACTTTGTTTTGACAGATTAGAAAATTAATGTTCTAGGATGAGAAAATTTTTCCTTCCATAAGTTTTGTAACTTTTTCCTATTTAATTGGAAAACAACACACCCCGATTAAAAGCATTTCCAA EMBV3_38095 CCTATGACGACAAGAGTGGTTGGGAGTCCTCTGAAGCCTTGCTTATTTTGCAACTGGTTC Gene GeneID:281167|FMO3:NM_174057:61_cdna Constitutive 1 NULL GeneID:281167 16 GENE FMO3 MGC128044 flavin containing monooxygenase 3 EMBV3_33033 TGCCAGACCCCCAAAGTGGGCAACACCCAGTGGAAGAAAGTGCTCATTGTGCTGAATGGA Gene GeneID:511215|CHST10:NM_001098011:47_cdna UTR3_Alt 2 NULL GeneID:511215 11 GENE CHST10 NULL carbohydrate sulfotransferase 10 EMBV3_04451 TCTCCATTCATTAGAAAAGGGGTCATCGGGGATTGGAAGAACTACTTCACCGTGGCCCAG Gene GeneID:100300896|LOC100300896:XM_002691338:508_cdna Constitutive 0 NULL GeneID:100300896 11 GENE LOC100300896 NULL similar to sulfotransferase family, cytosolic, 1C, member 1 EMBV3_42779 GATGGCCTCGGTCTTCTATACCCTGGTGATCTCAATGCTGAACCCCCTCATTTACAGCCT Gene GeneID:782841|LOC782841:XM_002693651:236_cdna Constitutive 0 NULL GeneID:782841 15 GENE LOC782841 NULL similar to Olfactory receptor 8J2 EMBV3_29263 GCGCTGGTCGCAGCCTCACTGCTTTGAACACATTTGTAGTTATCTCTGTCTTCTTACTCT Gene BVT0102_414442 - 0 NULL GK000005.2:41964127-42184162 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38197 TAGCCAGAAAGAGGTCAAGCTGGGATTTGTACCCTTGTTTTCCGACTCTTTGAGGGTGCC Gene BVT0102_140331 + 0 NULL GK000008.2:24372786-24497952 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224724 TCONS_00224722 1 XLOC_137621 Coding TCONS_00224722 XLOC_137621 NonCoding Coding - 8:24399268-24404402 - TSS168460 5134 3 TCONS_00224722_3 68 0.27950915465524 1 0 0.000219335555684713 0.000385575506736489 0.000273362202369728 0.000383315705383723 0.000209781996226966 0.000236096258180117 0.000216433774318569 0.000286864479263962 0.000870386058199882 0.000109923310927865 2.006493242091e-05 3.06447547637261e-05 2.88034262255952e-05 9.43910727810195e-06 0.000261558305287659 0 0 0 0.000619236711430813 0.000155284519675125 9.26785570877117e-05 0 0 4.57159022890629e-05 0.000106686518014276 0.000210807533001926 0.000238406834429363 4.76684590795385e-16 2.31259762341007e-27 3.02586259683304e-06 XM_588451.6 MDC1 PREDICTED: Bos taurus mediator of DNA-damage checkpoint 1 (MDC1), 5e-13 82.4 73.65 0.0272691858200234 XM_005247762.1 HSPBAP1 PREDICTED: Homo sapiens HSPB (heat shock 27kDa) associated protein 1 (HSPBAP1), transcript variant X2, mRNA. 1e-26 127 75.85 0.0387611998441761 0 noncoding 0 0 0 0 0.0987834603673724 0.513468388702547 0.0163806093596503 0.737091686582619 CAGTCATCCCCATCTTGGAACCTGCTAAGTGCAGAGGGCTCCACAGCCAGACTGTAGGCTCCATGAAAGCAAGGACAGGGGCTATTTTGTTTCACTCCCCGCCTTTTTTTTTTTTAACAGATATAATTCAATGATTTTTAGTGTGTTCAGGAGGCTGAATAACCACCACCCACCCCCACCAAAAAACCCTCTAGGCATTAGTAGTCATTCCCCCACCTCTTCTCCCCAAACAACTAATCTACTTTCCCTCTAGAATAGATTTGCCTATTCTAGGGGTTTCATATAAATGAAATCTGCTCTATGCAACTTCTCTCACTCAGCATACTATTTAAGATTCATCCACAGTGTAGCATGTGTTAGTACTTCATTTCGTTTCATTGTGGAATCATACCCCATGGTGTGGATTTACCACATTTTGATTATCCATTCATTAGTTGATGAACATTAGGGTTGTTCCTACATCTTGACTATTATGAAGAATGTACTTGAATCTTCATGTACAAGTGTATTAAGGGACAGATAAATCTAGGCATGGACTTGCTGGATCCTCTAGTAGCTCTGTGCTGAACTTTCCAAAAGGATCTGTTTTTATCCACAACTACAGTTCCCAGGTTGATAGCCTAGCCCCTGGGACTTTCTTTAACAAATGGATAGAATTAAATAAGAAATTAGGACTCAAATAAGTGAGATTGAGGTGCCTTTTTTTTTTTAACATGAAAGCATTTTATACCCTATTAAGAGCAACACAAATGGGACTTACTGTAATTCTTAAGAAGAATATGAAAAATAAAGAAGGTCCTAATCTAGGATCTATGGAAGTGCTAACAGGAGGGTGGGGAATCCTCAGAAATTGTCTATGGAATTGTTTGAGTATGTACAGGTGTAGTGTTGTCTTCACACCAGGCAAGAAGAGTGTCTAGTTGTGCCCTGCCCTGGCTGTGCCCCCCTCAACAGGGCATGGTGTCTGGGAGTCTGGCAGACTGTGCCCATTATAAGCCAGCTCTTTCCTTTCATGGTGCAAGGTTCTGCTCTCAAACCCTGGACTTCCCAGCCTAAAAAGCGCAAGCGTCTTCCCCAGGGCCACCCTCCTGAGGGTAATCCATGCCACTGTGGTTAAAGGATGGTTGTACACAGAGGTGAGCCTACAGGCCAGGGTTTTATAGCACAGGTGCCCAGGTGGTGCTCCCACAGAGAGGGATGGCAACAGGAGGGATGGAAAGAAAAGAGGGGGCGGGGCAAACTGTGGGCTGCAGGTTAGCAGCTGAGGAATGAGGCCCAGCTCTACTCCCGGCCACCATGTTCCAGTGAGAAATGTCAAGGCCAAGAATTCCAAATATGAACCTGGCCTTCCAGTCTTGGGTTCTTTTGAAGAGCTCTAAAAGGGTGACAGTACTGATGACATAAATGGGCAGAGTAGGACTGAGTGGGACGGGAAAATCTGCAGCATAAGGTACGTGGGCCTGCATTCCCTCTGTGCTCTGTCCCAGGTCTTGTGAGTGTAAGAGGACCAGTGCACCTGGGGTTTTTTCAAGATGGTACGTGGCTGTCAGATTCCCAAAAGACCCCAAGAAGTCTGCAGTGAAACTCGAAAACAATGAAAAGAATTGAAAATTAAAGAAAACATCAGGGAAGTTAGAAGTTCTGTTTTAGCCCTTTTTTCTCCACATGCAAGCTGAATGAACTTGGGTAACTTCTTACAGTCTTAGTCACTCACACAATGAAATGGAAATAATCCTAGCATATTAAATTCTGTCATAAATAATAATGCAAGGTGTCACTTTAATATTTCCCAGCCTTTTTTTTTTTTTGTTACAGCTCCATGACTAGGCCCATAAGATTATTAATGTGGGCTCATAACATTGCTAAAAGCTGAACTTCACTCCATTACAGAAGATCCATGTAAGATGAAATTGGATGGCATAATTTGTCCAAAGTTATTCCACAGTAAATTAGTGGCAGCCAAAAGATATATAACCAAGAATTTCAACATTCCTGCCCAAGCTCTACACAGCACTCTCTCATCTAAGACAAAGAAACGTTGACCATTTCACAACAGAATGTTTTTCTCATAGCTTTGACTCTCTTACATTCAGTAATGTATTTGACTTTCTCCAAATGAATTTATTCCTACTGTTTGTTCCTATACTCTTGTTTAATGGGGCTGTGAATATTATGGTATGTAAATATGAGAAATTTCAGCTGTTGGCCATTATGGCTGATACATAATGGATGATTTTTTTGTTTTACTAAATTAACATGATATTCTATTTCAACATAAGGGGAAAAAAGCTAAATCTCAACTGAAAAGTAACCAGTTTGGTCTGTAATATAAAATAGCCAGTTTAAGTTTTTACTTCTTTCGTCAATGAATTGTTATCATATAGAAATTGTGTAGATACAGAGGACATAATTATTCTAGTGATGGTGGTAGTGATTTGAAGTAGGATGGCCAGTTGTCGTGGTTGGTCCAGAACTCAGGTCTCCTGGGACGTGGGGTTTTCGTGTTGAATATGGGATGAAGCCTGGCAGGGTGAACCAAAGTGGTTGCTTTGACCTAATTTGAAGGTGATATGCACCGTTTTGTGTATGATTTAAATCTCAAAGTTTTGGTACATTTGTTAATCATTTTAGATATAATTGTCTACATTTACTCCCTTCTGGTTTGAAAAGAATATATGTAGCCAGATAGATTATGTCAGTAGGAAGGATGTCTATAAACTTTAATTAGAACAAGGACATTGAGACGAAACTAAATCCTTAACATTCCAGATAGATTTTTGTATGATAAAATTTTCTCTGTATGTTTCCTGTTATTTGTTATATTTAATATTGAACTATTATATATAGTTATTGCTGAAAAATCCATTTTTAATCGCATTGTTGTATGGAAATTATGTGAGTTTTCACCCTTAATTTTCAACAGGTCAGTTTCACTTTGATTCTTTATTGGCCTCAGTTTGAATGACCATCCATCCAATCAAGATTGCAACCTGGAGTGACCTTGCGCATTTTGCTCTTACTCAGCTGCTGTTTTAATAGCCTATACCTATGGCTATTGAGTCAGACACGACTGAGTGTGCACACACACATAGATGTTGTCAGTCTGTCTCAAATCGTTTTTTTTTTTTTTTTTTAATCTAATGAGCTTTTGCTTTTTGCTCTTTTATTTCACATTCTGTGGTCATAATTTAATGTCTTTTCTTGAAAGCTATTAATCACTCTCACTCAGCTCTGGTGTCACATGAATTTAATGACTTGCCAAACCCACATCAAAGTAAAAGGGATAAGCTTTCCACACTAACATTTGAATGAAGTTCCCCTCATTAGAAACATTACAAATACAGGCACCCTCAAAGAGTCGGAAAACAAGGGTACAAATCCCAGCTTGACCTCTTTCTGGCTATCTGATTGTGAACAATTATGTGGTGTTTCTGGGACTCTGCTTCCTAAGCTATGGGAAGGTTGGCCTTTTCAGAGGGTCTCAACCTATGGTTTCTGAGTGATATTTAGAGGGTCTGTGGGCTCTCCTAAAATTATAATACACTTAGTTATTCTGTCTATACATGTACCCTCCTACCCCTCGCCAAGAGGATCCAGTGCCTCCTGTACATTCTCAAAGGCATGCATGACCAAAAGATTGAGAACTCTTGAGCCAGATGGTCTTTGAGAAGACTCTGGAGGCAAAGTGTATAATATGCAAGTTTTCAAAAATCATTGTCTTTAGCCTTCTAAAAATCAATTTGCAAAACCTATCAAAACTTCCAAAATGAGGACTGTAAACTGCTTGCTCAGAGGCAGTGGGCATCCTGGTCTCCCGGCTGCAGAAACCCAGTAATGGAAAGAATCCTAAATCAGGGTAGCAAGAAGTTCTCTGGTGTCAGGCTAAGGGATTTGGAGTTAACTTTTCAGATGGGAAGACTTACTGACGGTTTTGAGGAGAGAGGTGACTCAATGAAAGCATTAATTGGAGGAAGAACAAATTAGAATCCATGCAGCAAATGACAGAGAAAGAGCCTGAGGATGCTGGACCAAAGGAACCCTCTTACAGGTCAGCATTTCCTCCACTGTTTCTGGTTACTCTAATGACCTGAGACATATTAATAGGTGTTCCCCCAGAAAAGAGGTGCTGTAGCCAATAATCTAAGAAAATGCTGAGTTAGGAAGTAAGGTTTTCATCACGTGATTCTCAGAACCTCTAATAGAGTTCTACCGAACACAGTATTTTTCCATTTTTAATTGCCCATGACCCTCCTCACCAATGCCACAGTTGAGTTCTGACAGTGAAGAGCATGAGCTATGATAGGCAATGGAAAAATGCTACTGCTGCCACTGCTAATGAGCACTTCGTAAATCACATTTGTTAAAATACTTCATGGCTTTAAGACTTGGATTGCCACCCACAGGACAGCTGTTATAAAGTTCTTGACCTGCAGCTAAAAATCTATTTTATCTTTTCTATACTTTTAAATTTTAATTTTTCACTCAAAGTCTTGGGGATACAAAGGTAGAAAACATCACTTGCCATCTGCTGCTACTACCTTGTTGGGAGGACAGATAACTGATCAGACACTGCCTACACTTGAGAGGCAGACCCAGAAGCGTCATTGAAATCACCCAGAAAGGACATTTATTCCGACTTTGAGGGCTTGGGGATTAGTCTCAAGATGAGAGGATAAATAAGTCACAAGTTGAAGGGTTAGCCAGAAACTTGCCAGGATGAAAAAGAGAAGAAACAAGAAAGTCTGTGCAAAGCCTTGGAAGTATGAGAACTGGGGAAAGGTGAGCAGTTCTCTGCTGTCAGAAAATGGACTAAAGTCAGAAAGTTAGAAAGATGACACTGGTCAAGTCCTGAAGAGTTACTACATCAAGTGCTCTATGTGCTAGGTCAAAGAATTTTGAAGATACATCTATGGTAGAATTTTCAACTAAGAACATACTAGACTTATATTTTAGAAAGGTCATTCTAAGTCTTTAAGACTCTATTTCCTCCCTATAAAGCAAGAATCACTGCTTCTGAGGGCTAGCTGCCCGGCAAGCTTAGATGCCAACACTACGGCACAAGATTTTTGAGAAAAGAAAGAGCCTTATTGAGAAGTCAACCAGCAAAGAGGCAGGGAGCAAGACTCTCAATCTC TCONS_00224726 s 5' 82775 TCONS_00224726 s 5' 87908 EMBV3_06083 TGACGCCCACAGGGCCTGCCGCCTCCCGCCTTCCTGTGTTCTGTTTGTTTTATTTTTAAA Gene GeneID:505611|GNA13:XM_002696232:63_cdna Constitutive 1 NULL GeneID:505611 19 GENE GNA13 NULL guanine nucleotide binding protein (G protein), alpha 13 EMBV3_43385 TCTGTGAGTTCCAGGACTTCTCCCTCCACCATCCGCTCCATGGGAAGCTCTTCAGCACCT Gene GeneID:510842|LPCAT4:NM_001077901:46_cdna Constitutive 1 NULL GeneID:510842 10 GENE LPCAT4 AGPAT7 MGC152090 lysophosphatidylcholine acyltransferase 4 EMBV3_21008 GGTGTCTGGGGGCAAAGAGCTTTGGAGCCAAATTGATTCTATGCAGGTGTAGGATGCACT Gene GeneID:614694|NUPL1:NM_001098129:64_cdna Constitutive 2 NULL GeneID:614694 12 GENE NUPL1 NULL nucleoporin like 1 EMBV3_15840 TGACAGAATGTAGCTGCCACTAAGCTGCTGCCTCTGCTGCACCAAAATGGATTCTGAGCA Gene BVT0102_099527 + 1 EMBV3_35852 GK000004.2:68859812-68884955 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31440 ATCAGTGGCAGCAGCTCTTTGGGTCACTTTGAGAAAGCAGTGTAGTGGAGAGAGCCAATG Gene BVV0101_015220 + 0 NULL GK000003.2:34060290-34070229 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172979 1 XLOC_104264 Coding TCONS_00172979 XLOC_104264 Coding Coding CYB561D1 3:34066173-34068836 j TSS128709 1576 1 TCONS_00172979_1 229 0.0526649746192893 3 0.409090909090909 0.000240881065545792 0.000532862953751904 7.2588576741352e-05 0.00057222221402002 4.20563442852363e-05 0.000148033212138484 8.64734772631263e-05 0.000136986743768961 0.000179361516955376 1.30535809399587e-05 2.83136505917246e-05 1.000588305037e-68 6.73626974029442e-05 5.85386619302716e-06 0.000211039551638481 0.000117310359192278 0 0 0.000195498924542392 0.000684212033454048 4.05815041360981e-10 0.000213747875005774 4.65688208494694e-05 6.38248033707529e-05 1.2332786830112e-05 8.94094151329422e-06 5.96525486304601e-05 9.0562502111838e-05 0.000190980887091115 3.81487828188704e-06 NM_001105398.1 CYB561D1 Bos taurus cytochrome b-561 domain containing 1 (CYB561D1), mRNA. 0.0 1299 100.00 0.456218274111675 NM_182580.2 CYB561D1 Homo sapiens cytochrome b561 family, member D1 (CYB561D1), 0.0 1474 80.78 0.999365482233503 TCONS_00172979_1 sp|Q8N8Q1|C56D1_HUMAN C56D1_HUMAN Cytochrome b561 domain-containing protein 1; 3e-151 425 93.89 0.995633187772926 1 coding 0 0 0 0 -1.32451256209637 0.123239753436875 -0.0821704829694363 0.373925977296904 GGCAGCTGGGAGTGTGCGGCTGCCGGGCGCCGCCATGCAGTCTCTGGAGGTAGGTCTGGTTCTCGCTCCGCCGAGGGAGCCGAGACTGACCCGCTGGCTGCGGAAAGGCAGTGGGATCTTGGCGCATCTGGTCGCTATGGGTTTCACCATCTTCCTGACTGTGCTGTCCCGGCCAGGAACCAGTCTTTTCTCCTGGCACCCTGTATTCATGGCCTTGGCGTTCTGCCTCTGCATGGCTGAGGCCATCCTGCTCTTCTCGCCCGAGCACTCCCTGTTCTTCTTCTGCTCCCGAAAGGCCCGGATCCGACTCCACTGGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCCCTGGGCCTGGGCTTCATCATCTCCAGCAGGACCCGCAGTGAGCTGCCCCACCTGGCGTCCTGGCACAGCTGGGTAGGGGCTCTGACGTTGCTGGCCACTATCGGCCAGGCACTGTGTGGACTTTGCCTCCTGTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGTCTCAAGCTCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACAGTGCTTCTGGGCATGCACTCTGTGTGGTTCCAGGCTCAGATCAAAGGTGCAGCCTGGTACCTGTGCCTGGTGCTGCCCCTCTATCCAGCCCTGGTAATAATGCACCAGATCTCCAGCTCCTACTTGCCAAGGAAGAAAATGGAAATGTGAGTTCCTCCAAACTCTGAATCGAAATGGGACACTTGACTTGGACTTCACTGGCTCCTTTAGCGACCTTCAGGGATCCACTTCAGAAGGGGTAGGGTTTTTGTATGTCTTAGCTGGGGTGGAGGCTGCAGAAACCCAAGCTGCCGTTGCCAACAGATGACTCAGTGGGCCAAAACGGCGAAGTGGATGGGGCATAAGTGATAGGTGATGGGGAGCTTGATCCTGAAGCCTCCACTCTTGATGGGAGAGAAGTGTTGGGTGGTACTGGCAGTCATCTCTTGCTTGCATGCCTAATGAAAAATTGGATTCCTGTAATTTATCAGTGGCAGCAGCTCTTTGGGTCACTTTGAGAAAGCAGTGTAGTGGAGAGAGCCAATGTACATTTTTTTATGGGTATGGTCCTTATAGGCTCTGTTGTGCAACCTTATGTGAGTCCAGTGTCTCAGGGACTCAGTTTCCTCATCTGTGTAATGGGTGATTGTTTCTAAACAATCTCTCCTACCATTCAGTGTCTGTCAAGTTGATGTCACAGAGCATCTTCCCACCTCTGAACCGTGGCTGGACCACTCATCAGACTCAGGGTGTAATTCTTACATTCATTGTCTCCTTACCCCTCTAGAGGGACCAATATGGCCCCCTGGCTTTCCCAGAACCTGTGCTGATTTGGCCCCTGCACCAGGGAACAAAGCATCAGGGGCTGTGGAGAGAAGGGGCCCGGGTGAAGGTCTGCAGCTCCTACTTGCCAAGACATTAAGGGCACTAAAGACACCTTAAACTTTTGGAGGAGCAGAAAGGCATTGGCTTAACCAGGCTTTGGCTCCTGGCTGGGTGTCTTAGCCCAGCTAAGAACTTCCT EMBV3_38803 TCTAACAGCCTCTACGAAGACCTGGAGCACTTCCTGGAGCACTTCCTGATGGAGGTGGAA Gene GeneID:100125591|IRF7:NM_001105040:189_cdna Constitutive 0 NULL GeneID:100125591 29 GENE IRF7 MGC179450 interferon regulatory factor 7 EMBV3_30123 GAAGTTACAGACTTCATAGAGGTATTGTGAAAACTGGGCAAGGTAGGGCACTGGGGAGGC Gene BVV0102_429561 + 0 NULL GK000007.2:12370537-12391793 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09991 CTGCAGCTGCGATCGCTGCGGTGGGTCCAGGTATAATTGAAAAGTGACCCTTTCTTCAGA Variant GeneID:505228|THRAP3:XM_002686473:527_cdna 62^149 3 EMBV3_03291 GeneID:505228 3 GENE THRAP3 NULL thyroid hormone receptor associated protein 3 EMBV3_01981 TGTCACTGGAGCTCTGGGCTGGCGTGGGGGACGGGCCACAATTAGCAATATCCTTTTAAA Gene GeneID:508513|UBE3C:XM_002687058:181_cdna Constitutive 0 NULL GeneID:508513 4 GENE UBE3C NULL ubiquitin protein ligase E3C EMBV3_26443 GCTTCTGAGCCAAAGCGTCATCCATCAACCCTACCAGTAATCAGTGACGCCAGAAGTGTA Gene GeneID:531488|WASF1:NM_001034017:47_cdna UTR3_Alt 2 NULL GeneID:531488 9 GENE WASF1 WAVE1 WAS protein family, member 1 EMBV3_05848 AGAGCTGTTCTGAAGTTCCTGATTTACCTGACTGCCTCAGGGTCAGCTCATAGCCTCTTG Gene GeneID:534898|ANKRD46:NM_001034619:36_cdna UTR3_Alt 3 NULL GeneID:534898 14 GENE ANKRD46 MGC129030 ankyrin repeat domain 46 EMBV3_24382 GAAGATGAAACTCAGAAAGAACTAGAAACATTACGTAATCAAGGTCAAGTAAGGGGAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01121 TTCGTGTCCGTAAACCATTCAAATGTCGTTGTGGTAAGAGTTACAAGACAGCTCAGGGCC Gene GeneID:616701|JAZF1:XM_002686863:70_cdna Constitutive 0 NULL GeneID:616701 4 GENE JAZF1 NULL JAZF zinc finger 1 EMBV3_18038 CTATGAGCTCGATGGCAAGGGCAGCCTTCTCTGGTTCACAGCGGACAGTGGCGCCCCAGC Variant GeneID:507222|TMEM208:NM_001034285:129_cdna 328^520 1 EMBV3_11896 GeneID:507222 18 GENE TMEM208 HSPC171 MGC127999 transmembrane protein 208 EMBV3_34243 CCCTCCCACACCAAACCATAAGTTCCATTTGGGCAAAAAACGTGCCTCGTGATAAACACC Gene GeneID:281957|OPCML:NM_174407:108_cdna Constitutive 0 NULL GeneID:281957 29 GENE OPCML NULL opioid binding protein/cell adhesion molecule-like EMBV3_30736 GTCCCTGCGGACTAAGCAGTCAAAGCAGGAGCCAGAAGCAGAAAAGGCATCCCAGAGGAT Gene GeneID:404128|SLC22A8:XM_002699298:250_cdna Constitutive 0 NULL GeneID:404128 29 GENE SLC22A8 OAT3 solute carrier family 22 (organic anion transporter), member 8 EMBV3_29578 CTTTAGAAAGGCAAGGAAGAAAGCCTGCCACTTTACCCTCTGCTGACAATAGGGCACTGG Gene GeneID:512651|CDC23:NM_001080266:22_cdna Constitutive 0 NULL GeneID:512651 7 GENE CDC23 MGC151719 cell division cycle 23 homolog (S. cerevisiae) EMBV3_03713 CCTTTGCAGTTTGGAAGGGAGGTCCTGGCTAGTGAAGCTATCCTTAATATTCCTGACAAG Gene GeneID:506212|CWF19L1:XM_002698427:390_cdna Constitutive 0 NULL GeneID:506212 26 GENE CWF19L1 NULL CWF19-like 1, cell cycle control (S. pombe) EMBV3_25136 ACTGCTACCAGTATGCAGCTCTGAGTCAGTAGGACTACACTGCCTTTCTGGCTCCTTTGA Gene BVV0102_450772 + 0 NULL GK000030.2:62749970-62882938 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15176 GGAGTTAGAGCTTTTGTTTGCAAATATCTGAGTGAAAAGAAGATAAAGACAACAGTACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10131 ACTGTGATACCGTCCCTCTGTTAGCATTGTCTTGCTCTGATGCTTCCTTTCCAGAAACAG Gene GeneID:508180|LOC508180:XM_002693662:274_cdna Constitutive 0 NULL GeneID:508180 15 GENE LOC508180 NULL similar to olfactory receptor MOR185-2 EMBV3_23108 CTGAAACCCTCAGAGCAAATGATGGCTCCTCACAGAAAGACCTTGGTCAACTTCCAAGCG Gene GeneID:338035|P2RX5:XM_002695754:210_cdna Constitutive 0 NULL GeneID:338035 19 GENE P2RX5 NULL purinergic receptor P2X, ligand-gated ion channel, 5 EMBV3_16570 TTTCCAAAGGGGATCCTTAGAACACCCATGGCTCCTTCTGTTCTCAAGGGAAAGGCGAGA Gene BVV0102_054057 + 0 NULL GK000020.2:12366625-12376705 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00236 ATTAGCACTTGGCACTCGGTCCCTTCCTAAGTCCAACGGTCACGCAAGCAACTGCCATTT Gene BVV0102_198182 - 1 EMBV3_42994 GK000012.2:14126890-14136517 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14632 GTGTTGAGTGTACCTACAACCACACTTGGATTGTATTGATCCAGAAATAGTCTCCATAGT Gene GeneID:540910|SMARCE1:NM_001099116:204_cdna Constitutive 3 NULL GeneID:540910 19 GENE SMARCE1 MGC152620 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 EMBV3_35382 CCAAAGCCGAAGAAAATAAACTTTGGGGGGTGCTCATGGACATTGAGACTACAGTGGGCC Gene GeneID:506830|MPPE1:XM_002697747:253_cdna Constitutive 2 NULL GeneID:506830 24 GENE MPPE1 NULL metallophosphoesterase 1 EMBV3_28177 CTTACTCAACACCAGCGAATTCATACTGGGGAGAGGCCTTATAAATGTAAAGATTGTGGC Gene GeneID:100299632|LOC100299632:XM_002695224:2_cdna Constitutive 0 NULL GeneID:100299632 18 GENE LOC100299632 NULL hypothetical LOC100299632 EMBV3_12476 GCGGGGCAGCACGGTCAGATGTCTATGCACAAAAAACCCAAAGACTCCAAAAACGCCTCT Gene GeneID:519626|OGFRL1:XM_002690010:21_cdna Constitutive 0 NULL GeneID:519626 9 GENE OGFRL1 NULL opioid growth factor receptor-like 1 EMBV3_26843 CATCATGAACCCCTGTCTCTGTGGTCTGCGGCTGCTTCTCTCTTTGTTCGTTAGCATTCT Gene GeneID:787084|LOC787084:XM_002707849:205_cdna Constitutive 0 NULL GeneID:787084 7 GENE LOC787084 NULL similar to olfactory receptor EMBV3_13943 TCCATTGAGCCAGTGCACACTGAAAGGACCTCTCCCCCAACCTACAGCATCTACTATCAA Gene BVT0102_015693 + 0 NULL GK000001.2:131658629-131669826 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18225 AAGATCAATGAGGACTGGCTGTGTAATAAGGAGGCAGCCCAGCTGCTACAGATCCTGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31328 AGTCTGACACTGCGTCCCCTTCCATTTGCACAACCCCCAGCTCTCCTTGGAGGGTCAACA Gene BVT0102_346338 + 1 EMBV3_25544 GK000019.2:48882737-48886901 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25518 TCATGTCGCGCTACGGGCGGTACGGAGGAGGGTTATTTGTGGTTCCCGAGTGAGAGTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17743 GCTTTTGTAATGAAAGACGGGTCTGCGAATGTCCTGATGGATTCTACGGCCCTCACTGTG Gene BVV0102_363640 - 1 EMBV3_33823 GK000005.2:48952373-49178874 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191783 TCONS_00191781 TCONS_00191780 1 XLOC_117019 Coding TCONS_00191780 XLOC_117019 Coding Coding WIF1 5:48913746-49009466 j TSS143658 4880 1 TCONS_00191780_14 317 0.14733606557377 10 0.949121908920904 0.00231471265473871 0.00180779545716023 0.0023242366002985 0.00120648945878759 0.0013587069631893 0.000565555603134715 0.000877298306369691 0.00120243737589292 0.0010889775419592 2.54732595603936e-11 7.788715011694e-21 1.57253889060906e-39 1.93066818136311e-16 1.08884486501277e-90 0.0006421510537062 0 0 5.68748576164313e-13 0.00160854842062815 0.00240092647417078 0.000291108318404188 3.78794166048764e-13 0 6.85983586461761e-13 0.00154238588950413 0.00160685173699581 0.00179248924820831 2.91396990270719e-13 1.16850077013528e-17 2.90969628289183e-13 XM_005206638.1 WIF1 PREDICTED: Bos taurus WNT inhibitory factor 1 (WIF1), transcript 0.0 3097 100.00 0.351639344262295 NM_007191.4 WIF1 Homo sapiens WNT inhibitory factor 1 (WIF1), mRNA. 0.0 2239 88.84 0.352459016393443 TCONS_00191780_14 sp|Q9Y5W5|WIF1_HUMAN WIF1_HUMAN Wnt inhibitory factor 1; 0.0 632 94.64 0.996845425867508 0 coding 1 0 0 0 -0.545297750238681 0.0344727077317587 0.000771751391461933 0.988258631167515 AATGCGTACACGAGTGAACACATACATGAAGCTGCCCACAAATGTAATTGACGAGAGTGAGTTACACAAGGAAAGCAAGGATAGCGGACTAGAAAATACATGGTAGAGTTTTCAAACTAAATGAAGTTGACTTGTAATACCTCCTAGCACATTACTTCCAGAATTTTATCATGTGCCAATAAATATTGTTACATTACATTTTTATTTGAGCAGAGAAATCTTAAAATATGACTTTTTTTCTGAGTGAAAAAGCCTCCGTGCTCTTTAACATCAGAAGAAAATCCAGCCTGATTCAATCTTAGATGGACCTTCTTCCCCCAAAATACACCCTCTTACTCTTGAAAAATAGCTGACTAGCGTATAACATCTGCTCCTTCCTCCCCTTCAAAAACCAAAAGAAAGCAAATCCAGTATTTTTAAATAACACTTTTCTCTACCATAAAATGTAATTTCTCCAAGTGTCCACTGCTGGGGAGAAGTAAACAGAGAAAAAAATTCCTTACAGCTGTATATATCACCAGTATCACCAGTACCAGAATCAACTGTTGCACAAGAACCTCCCTCAGAAGAAGTTGAGTTAGGAGGGAATTTAGTGCCTCTTTTTCTCTACCAAAAAGTAAATTTTTTGAAGGATATTTACCAATTACTATTTGATTAGAACAGCCTGTAGAGGGCGTCCTTACATTAAGAGCTAGAGGGGTTAGAGCACTATTGAGGGAAAAAAATACTTTCAACTAAAACTGCACCTTTCTGGAGTAAAGAAAATGTCTACTGTGTTGTGAAATTATTATCTTTGGGGAACAATCGGCATTACAATGCTAAAGTGCTTTAAGTATTGCTGAATGTATATGAATGCATTACATAAATGAATATTCACTGAAATAAAAAAACAGTGAAATCTTTGAATAGATGTGAATTTTATTGTAAAGGTAGAACAGCTGTGAAGGTTTGGTTGCAAACAGACTTAATCATGATTTACTTGTCAGTGTGAGGTATAGTGGTTAAGAGAATAGGCTTTGAAATCAGAGTGACTGGGATTTGAACCCTGACTCTACCACTGACCAGGTAAGTAACCATAGTTAGCACTGGGTAACCACAGTCAGCTAACTTACTGGACCTTTATGAGCCTGGTTTCTCCATCAGTAACGTGGGAATAATAATATCACCTACCTATTTAAAAGTGTTGTGAGAAGTAAGCTCTTAAAGTACTTTTACAATTAAGAAGTTCAAATCCATTGGAGATTTCTTGTTGTTAGGGAAATTAAAATGGAGGAAGTCTTGTTTTGGCTTCAGAAGCAGGAGAGCAGGTTCTGACCTGCTTCTGACTGGCCTGGACACTGCCTAGATTCTGTGCCTATCTGCAAACACAAGTCAGGCAGCACTGTAGATTAAAAAAAAGGAGGTGGGTCTGGAATTCTTGAGCTCCTGAGGGTCTGGCCAGCATCCCCACACCCCAACCCCAGATCTAACAAAATCCTATGACTCACAAGATAAACAGCATTGTAAAAGTTTAAAAAAGAACCAGGGCTGCACTTTTGTGTGCAAATTGATGATATGTTTGTAGCCCAGGATTGTAAGTGGGAGCCCTGGAAACTGTAATTTGAAGTCTCACCCATGGGGTGGACGCATTGCCCAGGACCTTTTCCCAAATGGGACTCCAGATTGCTATTAATGAGGGACTTCCTAGGGCTGTTCAAGCCTGGATGTTGGTTGGCGCAATTTGGTGATATATGTGCTTTTACTTTTCTTTATTCTTTTCAGTTCAGTTGCTCAGCCATATCCAAATCTTTGCTACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCCAGCACCAACTCCTAGAGCTTGCTCAAACTCATGTCCATTGAGTCAGTGATACCATCCAACCATCTTATCCTCTGTCTTCCCCTTCTCCTGCCTTCAATTTTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGTTCTTCGCATCAGGTGGCCAAAGTACTGGAGTTTCAACTTCAGCTTCAGTCCTTTCGGTGAATATTCAGGACTGATTTCCTTTAGGGTTGACTAGTTTGATCTCCTTGTGGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTTAAAAGCATCAATTCTTCTGTGCTCAGCTTTCTTTATGGTCCAACTCTCACATCCATACATGACTGCTGGAAAAACCATAGCTTTCACTAGAAGGATCTTTGTCTTTTCTTTTAATGACTGTATAATTGAAATGAAGGCAATTAATCCTCGATTAAATATTGAAATTGTTTATTGTGTGACCAGTGGTTTCTTTTGTTAACAAATCCTTCAAACCAGAGCCAAGAGGCTACACGCCCAGCCGTCTACGCGGGGAACTGCTCCGGCTGGGAGACAACTTAAGGGCGGCAGGTTGGGTAGGTGCGGGAGGAGTTTCAGCTGCGAGAACCACGATCCAGGAGGTCCGGAGTAGCATGGCCCGGAAAAGCGCCTTCCCTGCCGGCGCGCTCTGGCTCTGGAGCATCCTCCCGTGCCTGCTGGTGTTGCGAGCGGAGGTCGGGCAGCAGCCGGAGGAAAGCCTGTACCTGTGGATCGACGCTCACCAGGCGAGAGTGCTCATAGGTAAGATTTCGCGGGAGCTTCTACTTCTTCCCAAATGCCTGGGTCTTCACGCCCTGCAGCTCTTCTATTAAAGGAGAGATACATGCATTTAGAATGTTTTTTAAACTTAATTTCCAAGGAAGATTGTCCCCTTTTTAGTTAGTTGCGTGTTTGCTAAGCCCCTTCAGTCGTGTCGGACTCTTTGCGATCCTATGGACTATCGCTTTTCCATCTAAAAGCGTTTAAGCTTTTCTCTCCGTAAATCTAAGCTGTTCTAATGTTCTGATCATGCTGTTGTTGGTTTCTACAATCCAGCGTTTTTCAGTGGACCGAGCATGTGTTGGCACCAGTTTACTCCACAGTTCACTCCGTTTCACTGAAAGCATGTCTTTGCCATCATTCTTATCATCCACAGGAAGATTAATTGGTACTTGAAGGCAGGTGCTTTGTGAAAAGAAATGACCCATTACTAATTCTTCGGTGTTCTTTTGGCACGCAAGTTCTGATTTGGATTCTTCTAAGTTCAGCTAGTTTGATAGCTTTATTTCTTTGTGTGTGTTTTTTAAACCAGGACTTGAAGAAGATATCTTGATTGTTTCAGAGGGGAAAATGGCCCCCTTTACACATGATTTCAGAAGAGCACAGCAGAGAATGCCAGCTATTCCTGTCAATATCCATTCTATGAATTTCACCTGGCAAGCTGCAGGGCAGGCAGAATACTTCTATGAATTCCTGTCCTTGCGCTCCTTGGATAAAGGCATCATGGCAGACCCAACTGTCAATGTCCCTCTTCTGGGAACAGTGCCTCACAAGGCATCAGTTGTTCAGGTTGGTTTCCCATGTCTCGGCAAACAAGATGGAGTGGCAGCATTTGAAGTGAATGTGATTGTCATGAATTCTGAAGGCAATACCATCCTGCAGACACCTCAAAATGCCATCTTCTTTAAAACATGTCAACAAGCTGAGTGCCCAGGAGGATGCAGAAATGGAGGCTTTTGTAATGAAAGACGGGTCTGCGAATGTCCTGATGGATTCTACGGCCCTCACTGTGAAAAAGTCCTTTGCTCACCACGATGCATGAATGGCGGGCTATGTGTTACTCCCGGTTTCTGCATCTGTCCACCTGGATTCTATGGAGTCAATTGCGATAAAGCAAATTGCTCAGCCACCTGCTTTAACGGAGGGACCTGTTTCTACCCTGGAAAGTGTATTTGCCCTCCAGGACTAGAGGGAGAGCAGTGTGAAACAAGCAAATGCCCACAGCCCTGTCGAAATGGAGGTAAATGCATTGGTAAAAACAAATGCAAGTGCTCCAAAGGTTACCAAGGAGACCTCTGTTCAAAGCCTGTCTGCAAACCTGGCTGCGGCACACATGGAACCTGCCACGAACCCAACAAATGCCAGTGTCGGGAAGGCTGGCATGGGAGACACTGCAATAAAAGGTATGGAGCCAGCCTCCTGCATACCCTGAGGCCAGCAGGCGCCCAGCTCAGGCAGCACACGCCTTCAGTTAAAAAGGCCGAGGAGCGGCAGGACCCACCTGAATCCAATTACATCTGGTGAACTCCGACATCTGAAACATTTTAAGTTACACCAAGTTCATAGCCTTTGTTAACCTTTCATGTGTTGAATGTTCAAGTAATGTTTATTACAGTTAAGAATACTGGCCTGAATTTTATTAGCTTCATTATAAATCACTGAGCTGATATTTACTCTTCCTTTTAAGTTTTCTAAGTACAGCTGTAGCATGATGGTATAGATTTTCTTGTTTCGGTGCTTTGGGACCAACTTTATGTTATGTCAGTTGTTCAGGTTAAATTTTTGTCTTTTCAGTGTGTACTTGGCAGATAATTTCCAAAAGTACAATGCATTCACGGTATTGAGAGGCTGGGCAACATTAGAGAAGATAAATGGAATAAAAATGCATAAATCACAAGGGTTTGGATGAAGCAGTTAAAAGTGCTGAAGTCTTCGCATTTCAATTTATTTTGTCATGTATTTAGACACTTGTTACATTTTTTGAATTCCCCTTAAACTCATAATACATTTTACCTTACCATGACCTTACCATGATTCCAGAGAATTCAGTATTAAAAAAGAGCGAGAAAGAAATAACACTGTGGTAGTGACATTTAATGATATAATATATTGTAAACACAATAAAATAGGGAATATATGTATGAACTGTTGGCATTGGCTTGAAGCAATATAATATATTGTAAACAAAACACAGCTCTTACATAAACATTTTATACTGTTTGTATAAAATAAAGATGCTGCTTTAGTTTTC EMBV3_18711 CTAACCCTGAGAGCTTTGGCCTCTACTTCGTGCTGGGCGTCTGCTTTGGGCTGCTCCTCA Gene GeneID:618094|LOC618094:NM_001101271:319_cdna Constitutive 0 NULL GeneID:618094 3 GENE LOC618094 NULL hypothetical LOC618094 EMBV3_06104 ATCCTCAGGGCCATGGGTGGGGGCATGGTGGACTTAAAAGAATGCCTGGAAAGAAATCCT Gene GeneID:281869|INPP1:NM_174364:12_cdna Constitutive 0 NULL GeneID:281869 2 GENE INPP1 NULL inositol polyphosphate-1-phosphatase EMBV3_14848 CATGGTCTGGGAGGGACTGAATGTTGTGAAGACAGGTCGAGTGATGCTTGGGGAGACTAA Gene GeneID:404189|NME1-2:NM_205777:47_cdna Constitutive 0 NULL GeneID:404189 19 GENE NME1-2 MGC148277 NBR-A NBR-B NME1 NME1-1 non-metastatic cells 1, protein (NM23A) expressed in EMBV3_40200 TAGCCCTGGAACTTTATGTCAAAGGAGGAGGCCCCACTGCAATCCTGGGGTGACCTTTTT Gene GeneID:541156|SCARA3:XM_002689483:26_cdna Constitutive 0 NULL GeneID:541156 8 GENE SCARA3 NULL scavenger receptor class A, member 3 EMBV3_42643 ACCACATTCCCAGACTGCCCCATCCCCTTCCAGTTCAAAACAGTATGTCCTGAGTGGTTT Gene GeneID:507329|INPP5D:NM_001101882:20_cdna Constitutive 2 NULL GeneID:507329 3 GENE INPP5D MGC157261 inositol polyphosphate-5-phosphatase, 145kDa EMBV3_03946 CATTTAGATGCATACCGAATTATGCATGGGCCCTAATCACACAGACAAGGCTGGTGCCAG Gene GeneID:535571|CAPRIN1:NM_001076062:54_cdna Constitutive 0 NULL GeneID:535571 15 GENE CAPRIN1 MGC139131 cell cycle associated protein 1 EMBV3_30991 CCCCGTTAGGTCTGTTCTTGCACAGGGAGGATTCGTTCTGATTAGGCTTTCCTCCTGCAT Gene BVT0102_093055 + 0 NULL GK000011.2:95867087-95869269 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028898 TCONS_00028894 TCONS_00028895 TCONS_00028900 TCONS_00028893 TCONS_00028899 TCONS_00028896 TCONS_00028892 TCONS_00028897 1 XLOC_015616 Coding TCONS_00028900 XLOC_015616 Coding Coding GOLGA1 11:95867154-95912002 j TSS20218 5660 1 TCONS_00028900_2 825 23 0.874305973643722 0.000482866086772082 0.00183773024084321 0.000481912211396021 2.39776982026334e-08 4.90338448117682e-07 0.000385138933313772 0.000261107389236619 1.39301036345161e-08 0.000819020501806431 3.45723431044599e-26 1.52159471657934e-08 2.2985895726907e-11 0.000114627027524821 5.11105169815817e-27 3.42558088883821e-10 1.73801536922588e-06 0.000389260658584288 9.60017560236351e-05 0.000151977061480703 0.00111201652848135 2.48514295709185e-05 3.42779014697176e-05 0.000161664641883843 7.93466756297079e-05 5.13075534147382e-17 0.000195344207838886 4.30097421449332e-05 2.4661117487722e-13 2.53811528766625e-16 9.53122311342508e-24 XM_005213124.1 GOLGA1 PREDICTED: Bos taurus golgin A1 (GOLGA1), transcript variant X1, 0.0 8404 100.00 0.823144876325088 NM_002077.3 GOLGA1 Homo sapiens golgin A1 (GOLGA1), mRNA. 0.0 4233 80.15 0.82243816254417 TCONS_00028900_2 sp|Q92805|GOGA1_HUMAN GOGA1_HUMAN Golgin subfamily A member 1; 0.0 1258 85.68 0.927272727272727 1 coding 1 0 1 0 -0.386986709082031 0.0871481645907493 0.0042188176513398 0.930726999510573 GCCACTTCCGGCGCTCTGGTGGAAGTGCGGTTCCGGGTCGCTGCTCTGCTCGCCGGCCGGCCGTGGGGGCTGGTGACGCGGGCCGGCGCTCACGAGAGGCCCCGGAGGCGGGGCTCTGCCGGCTGCCCAGAGAGCGGCAGGACAGAAAGCTTTGACCTCCAAGCTGTTTTAAATCTAATAGATAAGCCAGGTGAGTAGGTGGTTTACAGACACTGAAGGCAAACTTTTGAAGAATTGCACAGACTTAAATGGATGCTCAGAAGTGATACTCCTGTGCCACAGACCTTTGGCCTTCATTTCAGTGGGAATGCAGCTAGTTTGGATAACTGGGCCTTTTTAGGCACCTGTCTCGGAATTCCTGGTTGCTGGCCTAACAATTGTTGTAGCGGTCAAGCACTGGTCATCAGTGTAGGAGAGCCACACAGCAAAATGTTTGCAAAACTGAAGAAGAAAATTGCAGAAGAGACTGCTGTCGCTCAGAGGCCAGGAGGTGCTACTAGGATCCCACGATCAGTGAGCAAAGAGTCCGTTGCCTCCATGGGAGCTGACTCAGGAGATGACTTTGCTTCTGATGGAAGCAGCTCCAGAGAAGATCTTTCATCCCAGCTTTTGAGAAGGAATGAACAGATACGGAAATTAGAGGCCAGACTTTCTGACTATGCTGAACAGGTCCGCACCTTGCAGAAGATAAAAGAGAAGCTTGAAATTGCCTTAGAAAAACACCAGGATTCTTCCATGAGGAAATTCCAAGAGCAGAATGAGACGTTCCAGGCCAACAGAGCCAGGATGGCAGAAGGACTGGCTTTGGCGTTGGCCAGAAAGGACCAGGAATGGTCAGAAAAAGTGGATCAGCTTGAAAAGGATAAAAGGTTTCTGACAGCTCAGTTACAGGAAATGAAGAACCAGAGTTTGAATCTTTTCCAAAGAAGAGATGAAATGGATGAATTAGAGGGATTCCAGCAACAGGAACTGAGTAAAGTAAAGCACATGCTTTTAAAAAAAGAAGAAAGCTTGGGGAAAATGGAGCAAGAATTGGAGGCACGAACCAGAGAACTTAGTCGCACCCAGGAGGAATTGGTGACTTCCAGTCAGATTTCGTTAGACTTAAGCCAGAAGCTGGAAGAACTGCAGAGACACTACTCAGCGCTGGAAGAGCAGAGAGATCATGTGACAGCTTCGAAAACAGGTGCAGAAAATAAGATCACAGTCCTGGAGCAAAAGGAACAGGAGCTCCAAGCATTCATTCAGCAACTTTCCATTGATTTGCAAAAGGTCACTGCTGAAACTCAAGAGAAAGAAAAACTCATCACACATTTGCAGGAGAAGGTCGCATCCCTGGAGAAGAGACTAGAGCAGAATCTCTCAGGAGAAGAACATGTGCAGGAACTTCTGAAAGAGAAAACACTTGCTGAGCAGAATTTGGAGGATACCAGACAGCAGCTCTTGGCAGCCAGAAGCAGCCAGGCCAAGGCCATCAACAACCTGGAGACTCGGGTGAAAGAACTAGAGCAGAGCCTGCAGGCCTCTGAGGAGGAGCTGAAGCGGAGCGGTGACGTGGTGGCAGCTCGGGAAGCTCAAATTCGAGAGCTCGCCGCCGCGAACACGGAGAGCAGCCGTGCCCAGCAGCAGGCCCTCGCTCTGGAGCAGCAGCAGGCGGAGCGGATCCACGCGCTGGAGACCCAGCTGGCGGGCCTGGGGAGAGCGCGGGTGGCCGACCTGACAGCCACAGAGCAGGAGCTGAGAAAGCTGGAGCAAGAAAATGCAGCCCTTAAAGAAAGTAAGAATGAATGTGAATGTTCTTTACAGCATCACCAGCTTGAACTAAAGAAGCTGAAGGAAGAATGGAGCCAAAGAGAAATCGTGAGTGTGGCAATGGCTCAAGCCCTGGAGGAGGTGCGGAAGCAGAGGGAAGAGTTGCAGCAGCAGGCCGCTGACCTGACAGCCATGATGGGCGAGAAGGAGCAGAGTCTGCAGGAGAAAATGGAAGTGATTCTCCAGAAAGAGCAGGAGATTCTCCAGCTGAAGAAAGGTCACGACTCTGCGCTGCTGCAGACACGCCAGCTGCAGAGCGAGCTGGAGGCCCTGCAGGGCCTGAGGGCCGAGGAGGCCACGGCCACGCGGGAGGACCTGCTGAGGCTGACGGGCCAGGAGCGGCCCCTGGTGCTGTCAGCCAGCAAGCCCCATGTGACCTCGAGGGCCAGGCAAGACCCCGAGTACCAGCTTCCAGCTGTGGAGGGAATACCAAACGGAGAGATGGGGGCAGCCACGGATCTGGGGCAGCTACAGAAGGAAAAACAGGACTTGGAGCAGCAACTTCTAGAGAAAAATAAGACCATAAAGCAGATGCAGCAAAGAATGCTGGAGCTCAAGAAGACTCTGCAAAAGGAACTGAAAATTAGACCTGATAATGAGCTTTTTGAAGTCCGAGAGAAGCCTGGGCCTGAGATGTCAAACTTGGCACCTTCGGTCACAAATAATGCTGACCTGACTGACGCTCGTGAGATCAACTTCGAGTACCTCAAACACGTGGTTTTAAAATTCATGTCCTGTCGCGAATCTGAGGCTTTTCATCTTATAAAAGCTGTGTCAGTGTTGCTGAACTTTTCACAAGAGGAGGAGAACATGCTCAAAGAAACCCTGGAGTATAAGATGTCGTGGTTTGGGTCCAAGCCAGCTCCCAAGGGCAGCATCCGGCCGTCTATCTCCAACCCTCGGACACCGTGGTCCTAGGTGGCACTACCCAGGGATGGGGGCTCCAAGGGCTGACACTTTTTCTGTGAAAAGAACACTGACACACCACAGTCCTGGTGGGTTTTTAATCACTGTAACTGCAGTATTTTGTACAAGCGTCTGAACATTGTTTACAAGACTTAAGGCCCACTCCTGCAGACTGATACGAATCTCAGGAGGTCGCTGATCCTGACATCCTGGTTTCCGGAGAGCCCTGGCACAACCCACATTGCCACAGTGCTGCTAAAATCCCAGCTCTGGCCAGCACCCACCTGCACCTGAATCTTCTTTCAGTTAGCACTTAAAGCTGAAGCCCTCAGCCTGTGTCAAGAGGGGAGGCAGCCAATCCATCATGTGGTGATGATGCTGGACAGACAGGCCTTCAAAACGGTGCCCAGGAGGGCAGACCCACCTGCTTCTGCCGTGAAGAGCCAACTCAGTGAGGCTGGCTTTTTTCAGCTCCCTTTCCCTGTTTGTAAGTTTGGGTTCAGGTGAGTTAGAAGAGGCTTTTGAGCGCTTCCGCCCAAGGAAACATTATTTCACCTTGCTACTCAGACATCCTAGAACTTCAGATGTGTCCATCTCTAAGGTACTCTGGGGCCAGTGTGGATTAATGAATATATGCACCTTTCTGACAGTATCTCATTTTACTGAAGAAAACTAGCAAATGTGTAAAAAGATTCTTAGTACCAAATACACTCAATTGCCTTTTTAATGAATGTACTTGTGGTGGATAGGTTGCTGGTAAACCATTTTAAACTATTTTTTATAGCTAAAGTTCCTCGCTATTATAAACATGTCTTCTGTATTATAAAATCCATTTAACTGGTGTTCTTAAGGGAAAATCAGAGCATCAAGAGGAAATTATTTCTAAGATTGGGATCCTTGTCCCAATCTGCCTCCCTCTGAAGCAGTGGTGGTATTTCACTTGCTTAGATCTTAATTCTGTTGTTATAACACTGAGCAAATGCTAATCAATGTTTTCTACTGCTGAGGACAGTCTGCTGTATTCAAAGGAAGCCGCAGCTGCTCCTCTCCTCCCCCCAGCCTTGACCAAAACGTTGGAGGTGGACTGCCCTTTAAGTGGAGCCACCATCTCCCCATCGCCGCACCCACCCCCGGATATTTAAGATGACACTACATTCACGTGTGGCGTCCAGGCGGCCCCTGCCTGGCTGCAGTGCTCGACAACACGCAGATGGCTCTGGGAGTGACTGATGAAATCTCGTATTCATCATCATTAAAGAAAGGGAAACACTTGCCCTGGATAAGCCACACTTTCAGATCTAAAGGGAAACTGTATAGTTTGATGAAAGTTTTATTGGTTAAATAAAAAACTGAGTTACTAACTGGAGCTCCTAGATTTATCATCAGTTACCCAATGATGTTAGGTTTCTCAATTGTTTAGGGCTAATATATATATAAAATATATCTCACAGGAAAGCAAGGATATGCAGTTAACGTAAGACAGTCCCATGGCCCTCGAAGTACCAAGCAAGGGCAGCATTACCCACATCCAGCTCGGGCTCTGCTGCCCAGTGACGCTTGTTACCCACCTCCTCCTGCGGCTCCCCCGGCAGATGCGACCCGCGTCTAGGAGCCCGTTTCCCATTATCTGGTGGGGACACAAACCAGGACTCCCTTCTGTTCCATCATTTTGACAAGTAGGAAGTAGCTCTTCCAGCTGTTCCAGGAAAGAGTTCCTTAAATTGGGTAGTTAGGGCGATCCCAGCACAGCTGTGGGAGGCCCCGCCGACTCCCGTGGCCTCTCCAGCCCTTGAGCTGGTCTCGACGCCCCAACACCCGCCGGCAGTTTTAGACACAGTTGTGGGGCCCCGTTAGGTCTGTTCTTGCACAGGGAGGATTCGTTCTGATTAGGCTTTCCTCCTGCATGTTGAATTTCCTTCAGCTTTAAGAGGAAGAGTGGAGTAAATACTCTTAAGTGATTTAATGCACTTTTACTTGTATAGAACGTTCTGTGCTAGACAGTACATAGAGCCCTTTATATGAGCGTCGGATCTTGATCTCACCCTCCATGTTGTAAATAGGGACTGTATTATCTAAAACTGCTGTAGAAAATACATTTGTGGTGCAATACACTTTTGATTAAAGCCCTTCAATCCAGATGCAGTGCATTTTACTTATCGGTTGGTGTCAGCATCTCCTCTGTGACTTGTTAAATTTAGTACCTTGTGTCTCACTTGAAAACTTCAAGGCTAGCTTCAAGGGCCTTAGAGCATTTGTCTTGCAGAAAGAACCTTCCCAGGTTAGGTTTGGGTGAGTAAATATTATATTTGTAGTTTAATGAAGCCAGCAGCCTAGTCCTACCTCCCAGGAAGGGTGGGGGTTCTGCAGAGGAGCTGGGAGGATTGTCACTTTGGTCAACATCCATCTCCAAGGCCCGCATGACTGGGGAGAGCTTCAGGAATACGAATGGGGTCCTTACCATAACAGAATGCAGACTACAGTTCCATGTGCTAAAAAGGAAAGACAAGCATCTGCTCTTCAGACAGGCCTACCGTCAGCGGTTACAGGGAACAAAATGTGCCTTGTCTGTGTACAGGCTTGTTCCTACCTGTTTGTCTCTTCCTCCTGTAAAGAAAACCCCTCAGCATCACAGTGTTCCTGGCAAACCGCCAAGCCCAGCGTCAGGAGCGGGTGATGGGTGCACCTGAGTGCACTCCCAGGACTCCAAGTGCAGTCACACAAACTGAGGATTGTTAAGTAAGCGCCGAAACTAGGTCCAAATCAGAGGAGTAAAAACAACAGTTATTCAGCAAAACATGTCTGTGTAGCAGCCAGCAGCACTGTGGCCCAGGCTGAGGGACTGCTGCACCCAGACTGTGAGGAAGCCACGCTCGCTCCCGGGCAGCTCTGCAGGGACTTTTGTCTGTCTACCCCTCCACGTCCAGTTTCCAGAACAGGCCACC EMBV3_36960 TCGTCCTCCTGCCTGGGGCGCTGAGCGCAGAGCCACCCTCCATGCGCCTGAAGGCCCGAC Variant GeneID:338062|FCGRT:NM_176657:89_cdna 189^713 1 EMBV3_08618 GeneID:338062 18 GENE FCGRT NULL Fc fragment of IgG, receptor, transporter, alpha EMBV3_35161 GCGGCGCTGGTTCATCCTCACCGACAACTGCCTCTACTATTTTGAGTACACTACGGACAA Gene GeneID:768035|CYTH2:NM_001077094:454_cdna Constitutive 0 NULL GeneID:768035 18 GENE CYTH2 MGC137537 PSCD2 cytohesin 2 EMBV3_23354 TGGTTAAACAAGGTCTGCTGAGGATGTGACCTGAACCACACTTGATCTTCCAAGCGGGGA Gene BVV0102_134968 + 0 NULL GK000013.2:55356673-55358718 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043127 TCONS_00043124 TCONS_00043125 TCONS_00043126 TCONS_00043128 1 XLOC_025857 Coding TCONS_00043127 XLOC_025857 Coding Coding CABLES2 13:55346110-55359298 = TSS31946 4090 1 TCONS_00043127_5 487 10 0.690604383104573 0.00286386642231703 0.00247525297707754 0.0024086212281861 0.00176840165972602 0.00160763850402793 0.000930772402630097 0.00163103895983448 0.00166519900742251 0.0014437033575213 0.000521102018647473 0.000182164457406698 3.53730952993638e-05 0.000855655336421431 0.00220480668229727 0.00214636841260017 0.00398661973189184 0.000527090849037949 0.000396318293256234 0.00125094161526355 0.00525906361947227 0.00127985316451403 0.000491506004649876 0.000145549470197931 4.38992091060126e-06 0.00446762510200905 0 0.00382341438228776 0.000800858650327508 1.55700983134431e-05 1.63617319693414e-06 XM_002692411.2 CABLES2 PREDICTED: Bos taurus Cdk5 and Abl enzyme substrate 2 (CABLES2), 0.0 6161 100.00 0.834963325183374 NM_031215.2 CABLES2 Homo sapiens Cdk5 and Abl enzyme substrate 2 (CABLES2), mRNA. 0.0 1471 82.58 0.345965770171149 TCONS_00043127_5 sp|Q8K3M5|CABL2_MOUSE CABL2_MOUSE CDK5 and ABL1 enzyme substrate 2; 0.0 736 86.53 0.928131416837782 1 coding 1 0 1 1 -0.0855914187380327 0.435093141687609 2.61695330182714e-05 0.999856897998683 ATGGCCGCAGCCGCGGCGGGTGGAGCGCCGGGCACGTCCTCCGGCCCCACCGCCAGGGCAGCGCCACAGGCGCTGCGGAGGCGCGGGGACTCACGGCGCCGCCAGGCCGCGCTCTTCTTCCTCAACAATATCTCCCTGGACGGGCGGCCCCCGAGCCTGGGCCCCGGGGGAGAGAAGCCCCCGCCGCCGCCGCCACCGCCCACCGAGACCCGCGAGCCTCCGGCGCCACCACCGCCTCCGCCACCGCCGCCCCCCGCGCCCCCCGCCGGCCTGCCCCTGCCCGGGCCCGGAGGCAGGACCCCAGCGCCCCAGGGCCTGCTCAGCCCCGCTCCCGCGCCCACCGGCTTGGGCCTCGGCCTCGGCCTGGGCCTGGACGGGCAGCGCCAAAGAAGGCGTGTGGCATCCCAACGCTGCTCCCTCGAGTTTCTGGAAGACACGGTGGGATGTCCCTCGGGTCAAAGAACCAAACACATATCCGGATCCCCGAGACACAAGGGCCTGAAAAAGACACACTTCATCAAGAACATGCGGCAGTACGACACCAGGAACAGCAGGATCGTGCTGATCTGCGCCAGACGGTCCTTGTGCGCGGCCTTCTCAGTCCTACCCTATGGAGAAGGCCTGCGAGTCAGTGACCTGAGATTGGACAGCCAGAAGCAAAGACACCCATCTGGCGGCGTTTCTGTGTCTTCCGAGATGGTCTTCCAGTTGGAAGGTGTTGAGCTGGGGGCAGATGGAAAGGTTGTGTCTTACGCCAAGTTCCTGTACCCCACCAATGCCCTGGTCACGCTCAAGCCAGACAGCCATGGCCCAGCGCCTCAGCCTCGGCCCAGCGTGCCCCGCACTCTGCTGGGGTCCCGCTGCAAACCCGTCCCACCCAGGGCAGCACCAGCCGGCTCGGAGCTAGGGGCTGACGCAGGGGATGCCCTGGAGTACAACCCCAATCTGCTAGATGACCCTCAGTGGCCCTGCGGCAAGCACAAGCGTGTGCTCATCTTCGCGTCCTACATGACGACGGTGATTGAGTACGTGAAGCCCTCCGACCTCAAGAAGGACATGAATGAGACCTTCCGGGAGAAGTTCCCCCACATCAGGCTGACGCTGAGCAAGATCAGGAGTTTGAAACGAGAGATGCGGAACCTGTCCGAGGAGTGTGGCTTGGAGCCCGTGACCGTGTCCATGGCCTATGTGTACTTTGAGAAGCTGGTGTTGCAGGGTAAGCTCAACAAGCAGAACCGCAAGCTATGCGCCGGCGCCTGCGTGCTGCTGGCCGCCAAGATCAGCAGCGACCTGCGCAAGAGCGACGTGAAGCAGCTCATCGACAAGTTAGAAGAAAGGTTTCGGTTCAACCGACGGGATCTCATCGGCTTTGAGTTCACAGTGCTCGTGGCCTTGGAGCTCGCTCTGTACCTTCCTGAGAACCAGGTGTTACCTCATTACAGACGCCTCACACAGCAGTTCTAGCCGGCCAGCCTCCACACCCTGGCTTCCAGTCCTAAGCACACCACACCGCCACGGTACTTCTGAGAGCCCTTCTGCGTGCTGCTGAACAGACCTGGGGCTCTGTCAGTGCTTCTCATTTTCCTGTGCCTACGACTGCTCTGGCACCAGGACTTTGGTCTACAGCGTCCAGTGGTGTTATCCACCGTGCTTCTCCTCTGCGTCACCCAGCCTTCTGCTGCTGTCAGAGCCGCCGCGCTGTGTTTCGTGGAGGCCTGGGTTTCCAGACCCTACTGCAGACGCTGGATTGCTGGACTTAACCCATTGGAGCATTAATCTCGGCTATTTGGGGTTTTCGGAGGTGGAGACCGCACTGTGGAACCCCCCACCCCCTCAGCCCAGCCCCTAGGGGTGTCTGCCCACCTCCCCATATCCACAAGCAGAGCTCTGCATCAGCCTAAGCCAACGGGGGCAGACTCCTGGTTAGTTGTGATCTCATTTTTTACTCTCAGACCTCTGTTTTTTCAAGGATCGCGTCACTGTGAAGTCCTGAGGGCCCGGGTGGCAGGTACCCCAGCTGGCCTCTCCATGGAACCAGCCTGCACCACGCAGGGATCTGTCTCACCAGAAAACCCCACTTGCTTATGACACCCAGGACCTTCAGAATGACTGGATTGCTGGTTCTTGATCTTCCTAAGCAATATGGCGGTGGCGGGGGGAGGGGGGGATGTACTTATTATCATTTAGGATTTGGTTCTGTGGGTCTTTTTCTAAGGGAACAAAAACTGGTTAAACAAGGTCTGCTGAGGATGTGACCTGAACCACACTTGATCTTCCAAGCGGGGAGGAAGACAGACCACTTCAACTGTCCTGCTCACGAGGGTAAAGGCTCTGCCTTCCTCCCAGGCAGGAAGGGAAAGCCACCTTGGCCAGAGCAGTGGTCACACCAGGCAGACCCCAAAGGCTGGTCGTTGTCCAGGGCAGGCCTGTGTCCAGCTCGTCTGCCTCACCAGGCTACATGTTACCCAGTTCTTCCACTTGCTGCCCCACCATAAACACTGAAGACCTAGGACTGGAGCTTCTTCACCAGCCAGCTGCTCTCAGAAAGGACCGTGTCGGCTGGGCCATCAAGCTGCGTCCCACTATTGTCCCAAGAACCTCACTGGAGGGGTGCCGGGGTAGCCCCACACTGCATCCTGTCCATGTGGACTGGTCCTTCTGCAGAAGAGATGCCAGCCCTTATCAGCGCATTCCACCACCAGTAGCTCAGCAAGATCTCAGCCCAGGAGGGCACAGGGATCCCCGCAGGGGTGCAGAACAGCTGCCCTACCCCACTCGCTGCTCTTCCTTGGTCACTCGCTTAGGTTCAGGAGGACTGCAGGAAGGAATCCGAAGCTCAACTCTGTACCCAACCTTATTTATCGAGTGCCTCTTTCCTGTTCTCCCCCCAGGACACCCCCAAACTCTGATGTGCACCAAGGGGGCTTGAAAGATGAAGCTGCTAGGCCCCAGGCAATCCTTGAAGGTGTCCAGTATCTCAAGGATACTTCTGTTACAAGCACCTGAAGGGACCAACTTCCAAAATGTACATGCTGGTTTACAGTTAGCTTTGAGGAACACATCTTGAGAATTTCGGTACAAATGTTAGAATGGCAATACAGTGTTTATATAGTGAGAACTAGTCATTCACCAGGCCCTGTAACCTTCCCTTTAGTGTGTTGTGTCCTTGTTAATGTCAAGAGCTGCCACTGTGTGGTACTCAAGTGAAGCCAGTATTTAAGGAATTAAACTTCAGCCTGAACTGTCACCCCAGACACCTGTGTCCAAGGGGCTGGGGCTACTCCCTCAGTGCCTAGGAGGCACCATAGGCTTAAAATGTGTGCTAAGTGGCTGTCTGACCTCACTGTCAAGTGTCAAGGATCTGTTTGCAAAAATTAATGTATTTGTGCTTTAAGTAAAAATTTGGTTTTGCAACACGTGTCATAGGCTGCCTTTCAGCTATCACCCCCAACACTCCAGAGCCCAGAAGAGCCCACCCCCCCGCCCCAAAAAAACACAGAATGAAGCAGGTAAGTTTTCACTATTTATTTATAACAAATATTCCATGTCCGGGATGCTCTTCAGTCAGAAGTTCCTGGAACAAAAAAGGACATTAAAACCTGGTTTGTGAAGCATCCTAGGCCCCAGTGCCCAAACTCCAGTCCTCTTACTTTGAAACGATGCCATCAGCCTTGGCCAGCCGGAGAATGGAGTCATCTGACTCGCCCTAGGGAAAAAAGCAGGTTGGGACCAGCTGCTCTTCTAGCCAGAAATCCCGCCCAGCTGCCCACTGGTTGGACCAAGTGGAGACTAGCTAGCAACAGGCAGACCGTCGACTCTACAGTGGGGGACAGGGTCTCAAGGAGGTCCCTGTGACAACCGAAAAGCTCCGAGGTTTTCCAAGGTGGGGTGGCCCTTTTTTTGGATCCTGAGCGTCCTATTTCCACCCCCAGGAAGAGGCTGGCAACCAGCACAATCTGAGCCAAAAGGCTCCAGTCCATTTCGCCAACAAACCCCCTCAGGCTTGGGGACAGCGAGGGGGACGCTATTCCGGTTCAAAAGCCCACAAGGTAAGCGCGAAGCCCCGAGACACACACCATCCTGCGAATGG EMBV3_31226 CCTAGGGGTAGAGCAGAATTCCACTATCACAAAGCATTCGAGTCTCCCTGGCTACTCTCA Gene BVT0102_153093 + 1 EMBV3_33493 GK000005.2:112642912-112685001 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193469 TCONS_00196524 TCONS_00193468 TCONS_00193470 2 XLOC_117490 XLOC_118362 Coding TCONS_00193470 XLOC_117490 Coding Coding XPNPEP3 5:112636631-112680577 j TSS144586 3653 1 TCONS_00193470_2 371 9 0.91707816588918 2.16185783366938e-08 0.000177394105054471 9.94686800678707e-07 0.000179704775364482 1.01814773722291e-09 1.50847036236293e-05 8.38099854531697e-06 0.000434912340734974 0.000384168233403023 1.60807847083012e-09 3.53773386343424e-05 3.6172222571646e-05 9.73549333693489e-12 6.22821745921332e-05 0.000440547369802482 0.000773262052625231 0.000186324544966826 0.00138897030587865 0.000173952177704095 1.68535754680716e-14 1.90033625260555e-18 0.000153118060099379 0.000926535619293039 0.000989403219841391 0.000736623669099878 0.000380698411168749 6.52447982712523e-05 1.57477414017216e-29 0.000190476294825203 4.06347419372123e-05 XM_005207416.1 XPNPEP3 PREDICTED: Bos taurus X-prolyl aminopeptidase (aminopeptidase P) 3, putative (XPNPEP3), transcript variant X2, mRNA. 0.0 6091 100.00 0.924171913495757 NM_022098.3 XPNPEP3 Homo sapiens X-prolyl aminopeptidase (aminopeptidase P) 3, putative (XPNPEP3), transcript variant 1, mRNA. 0.0 1543 80.51 0.452231042978374 TCONS_00193470_2 sp|Q9NQH7|XPP3_HUMAN XPP3_HUMAN Probable Xaa-Pro aminopeptidase 3; 0.0 597 89.39 0.835579514824798 1 coding 0 0 0 0 0.0105646836834686 0.933064737208683 0.019257314821961 0.808123774438082 GTTTCCTGGCGACGCATCCCTGCTGGCGACCGCTTCTCCGGCAGGTTTCCTCGTTTCCTTCCTGACGCCTGAGCGTGGCAGTTATGCGTTGGCTATTCTCTGCAACTAGGCTTGTTCCCGCGGTAGCAAGCGCCCGCAGCCTCTCAGGATGCTTGTCATGTTCTCGGCGAAGATACTCCCTGCAGCCCATCCCAGAGAGGAGGATTCCAAACCGATACTTAGGCCAGCCCAGCCCCTTTACACACCCACACCTCCTCAGACCAGCTGAGACACATACACTGTGGTATGACTGGATGAGGCCTGCTCACAAACAACTCCACTGTGACTACATGCAGCAGCTGGCGGAGGTCAAAGCCAGGAGCAAGAACAAGGTTCGGGCTGTGCAGCAGCTGGTACAGCGCCTCAGGCTGATCAAATCTCCTGCAGAAATTGAACGGATGCAGGTTGCTGGGAAGCTGACATCACAGGCTTTTATAGAGACCATGTTTGCCAGTAAAGCCCCTGTGGAAGAAGGCTTTCTGTATGCTAAGTTTGAGTTTGAATGCCGGGCCCGTGGTGCAGACATCTTAGCTTACCCACCTGTGGTTGCTGGAGGTAACCGGTCAAACACTTTGCACTATGTAAAGAACAATCAGCTCATCAAGGATGGGGAGATGGTGCTGCTGGATGGAGGCTGTGAGTCTTCCTGCTACGTGAGTGACATCACTCGTACCTGGCCCGTCAATGGCAGGTTCACGGCACCTCAGGCAGAGCTGTATGAAGCTGTTCTCGAAGTCCAGAGAGATTGTCTGACCCTCTGTTGCCCTGGAACCAGCTTGGAGAACGTCTACAGCATGATGCTGACGTTGATAAGCCAGAAGCTAAAGGAGCTGGGGATCACGAGGAACATTAAGGAGAAGAATCCCTTCAAGGCTGCTCGAAAATACTGCCCACATCATGTTGGCCATTACCTGGGGATGGACGTCCACGACACTCCAGACATGCCCCGCTCCCTCCCTCTCCAGCCCGGGATGGTAATCACCGTGGAGCCAGGAATTTATATTCCGGAGGACGACCAAGATGCCCCTGAGAGGTTCCGTGGTCTCGGTGTACGAATTGAGGATGATGTGGTGGTGACTGAGGCATCCCCGCTCGTCCTTTCTGCAGACTGTCCCAAAGAGATGAAGGACATCGAACAGATATGCAGTAGGGCCTCTTGACCCTCACGGCAGCCCGCGTGGGTCTCGGGTGCAGGGGGGGTGGACGCAGGTACCTGTGCGTGTGTGCTTTCCAGGGATCTCTGTGTGGATACTTGTTCATGCATTCCCTTGGGGAGTGCTGCAGCTGTGCAAGTCTGTGTGAGTCTGTGTGTTGTCTTTTTGTTTTATGTGGCTAGAAACTTGGAAAAATTGCATTTTTGGACTATATGTTACTGCAACTTTATTAACATTAATTCTGTAGAATTAATGACCGAGACAAGGTTAATGTTAAGATATAAGGAAAGATGTTGGTTACATATGTCCATGCATTCCAGTTGGCACTTGTGGAAAATTCTCTCCAGGTCCTTCCCCTTCTGCACTTTTCCTGAGATCTACCTAATATCATCAAATTTTCGTGTAATGCTTACACTTCGAGCTAATCACCAGAGTCTGCCCACATTGAAAGCCGCCTGTCTGATTGTGGGTGGCCAGTGTGTACCTTCCATGATACCTGCCTTACCTGTTCAGGAGCCCACGTGAGCCCTCAGGGCACTGGTGTTCTCCAGCCCCATCACTGAGCCACAGTCCAGATTCCAGCAACACTAGCTATCGAACAGAACATTTTTGAGCTTTTTTTACTATTTGGTTGCCTGGGACCTGGAAGGTGTTTAGATTCTTGATAAGGAAGGAAATGGAAGAGAAAGAAAAGTATGTATGTATCTGCTCTAGATCCAGACCACCATCTGTCTGTTTTCAATCTAAAGAGCACTCCTTTCCCAGATATCCTTGCTGTCTTTATAGACTCTTACCACACCGATCCTCAGAGCACAGCCTTGAAGCTGCTTCTCTGGCCAAGGGCAGATCCTCTGCTCACCGAGTTAAGAGTCAGGGGAACAGCACCCAGTTATCATTCTGTGATTTCCTCTAGTGCTGATAAAAGCAAAACATGGAACCCAGCCAGTAGCTGTAAACACCCTCTGATCCTTTCCTTTCTTGGACGTTAGCCTGGATGGGCAATGGGAAAGCCCAGCGTTTCCCTCCATACAGCATTGAATGCAGTTATGTTAAACTCAGTTTGCAGAGTGAACGGGGCTAGACCCCTGCAGATGGTTTATTTGGGAGCTTCAGTCATAGGGGGCTGCTTTAGGAAATAGTGTATTCACCTCCTTTAAACCTGAATGTGAGCCCAAAATGTATAAAACATGCTGTTAGAACATAAATTTAAGAAAATAATTGCTTTAGGGAAGAACAGGCTAGGAGAGGAGCATTGTTGCCTCTGCCACATACTTTTATGGCTGTGAAAGTATTCAGGAGTTGCTATTTTTCTCTGTGATAAAGAAACTATAACTATGTTTTTTTAACTTGAAACACAGCAGTTAAGAAGTAAAATAATAACTCTCCTCTTCCCATAATTGTACCCAAGTTAGGAAGGTACCTCTCATGGTGACTTAAAGATGTCTTCGTGTATCTTCTTTCAAAATATTATCTTTTCATTAACTTTCATATGGTCAGAAAAGGAAAACTACTATAGACATTATATGTTAATTGGGTTTAAAAGCCATAAAATAAGTTAAATCCCCAGATAAAGACACTATATCTCATTAAAATTTTAAAAATGGGCTTTGTTACATATTTTAAGACATACATAACCAACATCCTCCTTAACTTTCTTAATAATAGAAAGACTGCAGACATGATGCGTGATGCTGCCTCTCCCTGTCCTGTGTCCATGTCAGATCACAAGCACAGCACAGCAGCTTTCCGCCAGCCCAGCTGTGACTTCAGAGTCCTTCCAGTAACTGCTGTCAATAAAACAGGAGCTGGGCTTTGAGTTAGACTCTGTCTACCATCCCTCAGCTGGCATATGATCAACGATCATGTAACTTATTTTTGTATGTATGTTAGAAAGTACGTGAGGGCCGGGGTGGCAGCATACAGGACCTCGCTTAGAAGAGGTTTTTATGGTGTGGTTCTATTTTTTTTTTTTTTTTTTAGTTTCCTGAAGTGGGATCTGTATCCCAGAATGTAAGCTGATAAGGGTGCGTTTTAAGCCTGAACAAATATACTTCAAGCTGAAGTGCTTAATAATTCTAATGACTGTATCTCGAAGCCCTAGGGGTAGAGCAGAATTCCACTATCACAAAGCATGCGAGTCTCCCTGGCTGCTCTCACCTCCACCTGTGTGTCCCTGAGGAACTCAGGGTGAGCATCAGTATTATTCGGGTCAGGGGTCTCCACTGAAATCCAGGCCTTTGGGGGTTTGCTTCATGAGGAGCTGAGAGAACTGCAGTCTTTGCCAGCATTTCTTAATGCTTTGTTTGACTTTTGTGCAATTATATAAGTTCAATTTGGACAAAATGCTGTTACTTTTTAAGGCGCTATTGACTGAAAATAAATACATGGTTCCCAAACAAGGGAACAGCATTTGTTACTGTCATTTTAAAAATAAACTGTAAAACAATATAAGAATGTGTG EMBV3_12657 GTGTGTTAACAACTTCTCAGATTTCGTAGGGGGCCTGTCTTCACTGTTTCATTTTCAAAA Variant GeneID:525136|WDR51B:NM_001099031:38_cdna 595^844 4 EMBV3_29636 GeneID:525136 5 GENE WDR51B MGC139093 WD repeat domain 51B EMBV3_31333 AAGTGATGCTCTCGGATTCCTGAAAAGGGGCAAAGCCTGAGCATGTGACCTGAGACTTGG Gene BVT0102_064461 - 0 NULL GK000019.2:28570384-28584772 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211922 TCONS_00211918 TCONS_00099468 TCONS_00211921 TCONS_00211920 TCONS_00211919 TCONS_00211923 2 XLOC_130038 XLOC_059711 Coding TCONS_00211923 XLOC_130038 Coding Coding DHPS 7:13932204-13935240 j TSS159146 1106 1 TCONS_00211923_3 186 9 0.638550247116969 0.000543173378392578 0.000650742133597667 0.0050976913677759 0.00349442201133194 0.00231588045433184 1.8844125261779e-12 7.3125430710103e-09 1.07081471474014e-10 0.00108620810260875 0.000488915940660272 2.43722659601588e-33 0.000779498538591994 6.74923815650418e-13 6.98783073200714e-05 8.91431934751329e-22 0.00310925469591536 0.00095681944848467 0.000871482904302572 0.0096739762200612 0.00925441108216925 5.88838396639113e-08 0.00211381498536463 0.00226754068435811 2.73561159389292e-07 0.00467684214391409 0.00512708762021886 0.00120143613612156 0.00059885683579858 0.000335244625421819 0.00208341350560779 NM_001003657.1 DHPS Bos taurus deoxyhypusine synthase (DHPS), mRNA. 0.0 1710 97.51 0.890596745027125 NM_001930.3 DHPS Homo sapiens deoxyhypusine synthase (DHPS), transcript variant 1, 0.0 1232 86.93 0.894213381555154 TCONS_00211923_3 sp|Q6EWQ6|DHYS_BOVIN DHYS_BOVIN Deoxyhypusine synthase; 1e-135 389 100.00 0.994623655913978 1 coding 0 0 0 0 -0.732035222712066 0.116572897580726 0.00532511535735852 0.90968395457732 GATGCTCTCGGATTCCTGAAAAGGGGCAAAGCCTAAGCATGTGACCTGAGACTTGGGCTGTGAACAGGGCGGAGCCTACACAGGGGTGTTCCTTCCCCTGTACCAGATAGAGAAGAAACTCGAGCCGCTATCCGAGGATGAAGACCAACATGCAGACTTGACGCAGAGCCGACGCCCACTCACCGGCTGCACCATTTTTCTGGGCTACACATCCAACCTCATCAGTTCAGGCATCCGTGAGACTATCCGTTACCTCGTGCAGCACAACATGGTGGACGTCTTGGTGACCACAGCTGGGGGTGTGGAGGAGGATTTCATCAAGTGCTTGGCGCCCACATACCTGGGCGAGTTCAGCCTCAGGGGGAAGGAGCTACGATTGGGAACTTGCTGGTGCCCAATGACAATTACTGCAAGTTTGAGGACTGGTTGATGCCCATTCTGGACCAGATGGTGCTGGAGCAGAACACAGAGGGTGTGAAGTGGACACCTTCCAAGATGATCGCCCGGCTTGGCAAGGAGATAAACAACCCAGAGTCCGTGTATTACTGGGCCCAGAAGAACCATATTCCTGTGTTGAGCCCGGCACTCACAGATGGCTCGCTGGGTGACATGATCTTCTTCCACTCCTATAAGAACCCAGGTCTGGTCCTGGACATTGTTGAGGACCTCAAGCTCATCAACACACAGGCCATCTTCGCCAAGCGTACGGGGATGATCATCCTGGGTGGTGGCATGGTCAAGCACCACATTGCCAATGCCAACCTCATGCGGAATGGCGCTGACTATGCCGTCTACATCAACACTGCCCAGGAGTTTGATGGCTCTGACTCAGGCGCCCGGCCGGATGAAGCTGTCTCATGGGGCAAGATCCGGATGGATGCACAGCCTGTCAAGGTCTATGCTGATGCCTCCTTGGTCTTCCCGCTGCTTGTGGCTGAAACCTTTGCCCAGAAGGTAGATGCCTTCATGCCCGAGAAGAATGAGGACTGAACACTGGACGGTGCAGCCCCAGGGAGGCCTCACCCCCCTCCTCTATTTATTAGTTTGCAGACCCAGCCCCTCCCCACTTCTTGGTCAGCAGCATGTCTAGAATAAATGATCTCAGC EMBV3_27035 GACCGGTAGTCGTCTCTGCAGTGACTCCAGCAGCACCGCTGTTTCTTGGTGTGCACAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05737 GGGGATGTGGCTAAGAAGGGTGGCCCAAAGCGGTTTCAGTTGTTATCTGTATTGTTTAAA Gene BVT0102_148844 + 0 NULL GK000026.2:31152182-31325372 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27704 CAGCCACCAGTGCGCCCCTGTTCGCATCCCCTGCGCGGCAAGGAGAACAAGGGGTCTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42960 ATACCATTGCAGACCCCTCTGAAGACCCTGCTGCAGATTGCAGTGATGCCCATGCTCAAT Gene GeneID:505640|PLTP:NM_001035027:883_cdna Constitutive 1 NULL GeneID:505640 13 GENE PLTP NULL phospholipid transfer protein EMBV3_14870 GGACACAAGAAAGCCTTGCATCCTAAGCGGATAACAGGGAGACTCGGCAGACGTGAAGCA Variant GeneID:505225|ADD3:NM_001075194:21_cdna 132^179 1 EMBV3_35316 GeneID:505225 26 GENE ADD3 MGC139783 adducin 3 (gamma) EMBV3_04615 GCCACCTGAAGGCAGCACTTGCACGAAGTATCTGGAATTAGTCAACAGACAGTGCATCCT Gene GeneID:509351|LOC509351:XM_002693805:36_cdna UTR3_Alt 1 NULL GeneID:509351 15 GENE LOC509351 NULL hypothetical LOC509351 EMBV3_05595 CCCAGTCATCTGTATTAAGAACTGCCCTCCTCATCATGCGTCCCATAGCTGGTCTGAAGT Gene BVV0102_100846 - 1 EMBV3_41404 GK000018.2:16864811-17031948 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085633 TCONS_00085631 TCONS_00085632 1 XLOC_051917 Coding TCONS_00085631 XLOC_051917 Coding Coding N4BP1 18:17028337-17050441 j TSS63888 7592 1 TCONS_00085631_8 811 0.126448893572181 7 0.656833913948333 2.64883921350488e-05 3.64946549398248e-05 5.70380095448232e-05 7.86447109668934e-05 2.49377640783186e-05 2.3338539642775e-08 2.33488006680904e-05 1.61099871194688e-06 6.96932794135542e-05 1.36896178769218e-10 1.61813392409174e-18 2.01755501034644e-06 6.2468363568501e-16 2.96835158396712e-05 2.46322725714094e-05 0.000906195388465569 0.000862536554306572 4.89984314419153e-09 3.55109279684716e-05 3.91989137140998e-12 8.54628803491641e-19 9.1379435328979e-07 0.000182295722603509 4.75007236618843e-07 0.000158260850589748 4.48936265546372e-08 2.41948052280316e-05 5.41723524155338e-06 7.7548006043104e-05 0.000221150153419186 NM_001191433.1 N4BP1 Bos taurus NEDD4 binding protein 1 (N4BP1), mRNA. 0.0 7016 99.97 0.512644889357218 NM_153029.3 N4BP1 Homo sapiens NEDD4 binding protein 1 (N4BP1), mRNA. 0.0 4329 83.05 0.54768177028451 TCONS_00085631_8 sp|O75113|N4BP1_HUMAN N4BP1_HUMAN NEDD4-binding protein 1; 0.0 1433 88.29 0.998766954377312 1 coding 0 0 0 0 -0.0206870314318683 0.8751388271447 0.0143863499530409 0.817840102893397 GAAAAATTTTTGTTGTTAAACTGATCTTGTTTTAAATGCCTTCAAAAATCAGTCTGTTTTATCTGGAAACAATAGTCGCAAAGAAAAAGCCAAGGAATATATTAAAGGAATCTGTGAACCTGAACTAGAAGAAAGAGAATGTTATCCCAAGGCCATGCACTGCATTTTTGTTGGGGCACAGAGCCTGTTTCTGAAGAGCTTGATTCAGGACACCTGTGCCGATCTCTGCATTCTCGACATCGGTCTCCTTGGCATCAGGGGAAGTGCCGAAGCTGTGGTCATGGCTCGGAGTCACATTCAGCAGTTTGTAAAGCTCTTTGAGAATAATGAGAACCTACCCAACAGCCAGAAAGAATCAGAGGTAAAAAGGGAATTTAAACAATTCGTTGAAGCCCGTGCAGACAGTTACACAATGGATTTGTTAATTTTACCCACTTCCTTGAAAAAAGAACTCTTGGCACTCACCCAAGGTGAGGAGAATCTATTTGAAACAGGAGATGATGATGTTGTTGAAATTAGAGATTCTGCACAAGCAGAGTTTACACAGAATGCTGCCACAGGGCTGACTATTTCCAGAGATGAAATTGTTTTGCAGGAAGATGCAAGAAATAAAGCGGGGACTCCCGTTTCTGAGCTCACAAAACAAATGGACACAGTCTTTTCTAGTTCACAAGATGTACTTTTTGTTCCAATAAATGGTGTAACCCCAGATGAAGAGGCACTTTCCAAAGACAGAGTTTGTCACAAGAGGAGGTTTTCTGATTCTGAAGAAAGGCATACCAAGAAACAGTTTTCTTTGGAAAATGTTGAAGAGGGAGAGCTTCTACATGATGGTAAGACATTAGCTGGAAGTGTAATCATTGACGTCTCTGATTCTTCTACTGAGGCCGAAAATTTAAGTCCAGACGTAAAAGACACTACTGAGGAAATGGAGTACAACATTCTCGTGAACTTTTTTAAAACCATGGGCTATTCCCAAGAAATTGTTGAAAAGGTCATTAGGGAGTATGGGCCATCTACTGAACCGTTATTACTCTTGGAGGAAATTGAAAAAGAAAATAAAAGATTCCAAGGAGACAGAGAACTTTCACCTGGTACTGTGTATCCAGAGACCAGCAGAACCAAAAATAAAGGTGTCTGTAGCAGCATAAATGAGCTTACAGCAGATTCCACTCCAAAGAAAACACAAACTCACACACAGCAAAATATGGTGGAAAATTTTTCTCAGTTACCATTCAGAGTTGAATCAAAACCATGTACCTCAAATTGCAAAATTAATACTTACAGAACAGTGCCAGTAGAACAGAAACAAGAAATCTGGAGTTCAAATCAGAACTACATTTGTAACATAGACCTTGAGACCGATGGCCCTGTACCCACTGTTGTCCCTTCAAGTCCCAAAGAAGTTGTCAGTTTTGTTTCAAGAGGAGCTTCAAGTCACCAGCCCAGAATTCCGGTTTTTCCTGAAAATGGTTTGCAGCAGCAAGCAGAACCTTTGCTTCCAAATAGTATGAAGTCTGCCTGTGAAAACCGCTCGAGGTGTTGTAGCTCACCTCAGTCTAAGCCCGGCTGTCCACCCCTTTCTCCACCGATGCCACTCTCCCAGCTGTTACCTTCAGTTACTGATGCTAGGTTGGCGGGACCTTCTGAGCATATTGATTGCTCAGTTACGGGGGTTCAAAGATTTCGAGATACTCTGAAAGTGCCCTACAAGCTGGAATTAAAAAATGAACCAGGGAGGACGGATTTGAAGCACATTGTTATAGATGGAAGCAATGTTGCGATTACCCATGGTCTGAAAAAGTTCTTTTCTTGTCGTGGAATTGCAATTGCGGTTGAATATTTTTGGAAGCTCGGCAACAGAAACATCACTGTATTTGTTCCACAGTGGAGAACAAGGCGGGATCCTAATGTCACAGAACAGCACTTCTTAACCCAGCTCCAGGAGCTTGGAATATTATCTTTAACTCCTGCACGGATGGTCTTTGGAGAAAGAATTGCTTCTCATGATGACAGGTTTCTACTACACTTAGCGGACAAAACTGGTGGGATAATTGTAACAAATGATAACTTCAGAGAATTTGTGACCGAGTCAGTCTCCTGGAGAGAAATAATTACAAAAAGATTGCTCCAGTATACCTTTGTGGGGGACATATTTATGGTTCCTGATGACCCTCTGGGAAGAAGTGGACCTCGATTAGAAGAATTTCTTCGGAAGGAAGTCTTCCTTAGAGATATGCAGCCCCTACTCAACGCCCTGCCAAATGTGGGCATGTTTGACCCCAGCTTCAGAGTCCCTGGCGCCCAGGCAGCCAGCACCAGCCACCAGCCTCCGACCCGGATTCAGGGCACCCCACCCAGCCACTGGCTTCCTCAGCAACCCCGCTTCCCACTTTTGCCCAACCTTTCTAACATCCAGCAGAATCTGCCCATGCCAGCACAGAGATCTCCTGCAGAAACCAACGAGCTGAGGGAAGCCCTTCTGAAGATCTTCCCTGACTCGGAGCAAAAACTGAAAATCGACCAGATCTTGGCAGCTCATCCATACATGAAAGACCTGAACGCACTCTCCGCCATGGTATTGGACTGAAGGCTGTTGGGAACTGGGGCTCTGGGCTGAAGACACACACTCAAGCTAGTATCTGCATGTGCCAGCAGGAAGTGACATAATGTGAAAAAACCAATTTCCCAGTGGAAATGCTGTTGTAGTGTATAGGAGAAAAAAAAAACACAGATGTTTTGTGTATAAAAAAAATCTGGGTTTTCAAAACCAGCTTTTTTATATATATACATTATGCTGCTATTACGGATTTAACATTTTCTGTAAAAGGAAAGTCTACATTTTCTGCCTGTTCAGAACTGTTTAATAGCAGTTACTCTTGAGTGCACTTACATTTTTATGTTTTTTAAACTATTTTCCTTAATGCTGAAAATATTGACAAATGGATATGATTAGCCTTTCTTAAAAAAAAAAAAAAAAGTTGCTTTCTTAGGGAAAGCAAGAACTCTTAAAGTATATTTTCTTGAGATGACTATGTCACGTCCACTGACATGAAGTGTGCTCACCCTCCTAGCCTCCTCTACCCTCGCCCCTGGAATTAGAGTCCGTGTGAGTTAATTTTGCTCCTCTGGGGTCTTTGATTGGAGCCATTTGTGAGAGTGGACAGGTGATGCCACTAGATGGCACCTTGTGCCTAGCCACTGTTAATGACCAGGGCAGAGCTAGACGCACGGAGTATCCGGCTGGGAGAACCTTGAGAGCCCACGTAGTCCAGCCCTTCCTCCCTTCCCACCTGGCAGAAGAGGGAACTGAGGCTCCAAGTGCCCTCTGTCTGGACGCGCCCAAGTCCACAGCTGTGAACTGGATCCCTCGTGCATGGCTGGGACACGCAGCACTCAGTCCCTGACTGGCTCTAGAAGTCCCATCTCAGCTTCTGAAGATGCTAGTGGGACGTGAGGAAGTTCAGTGAAGAGCGTCATTATTACAGTAGTTTGGTGTCCACAGCCTTGGGAGATGCCCCATGTGAAGTTTGTGCAGCTTTGCCAAAAAACTGGTTTTCTATTCTCAAGAATGACCCAAGCCAATAAATAGCATTAGTAGCTTCTGTGGGGGCCCAGAGCCCTGTATTTATTTTTCCTGTGTTAATCTCTTTAGTGTTCTCCTAAGCTGCCCTTCCTATGGGTCTGTCTCAGAATTGATATCTTAGTATTGTGTTTTCAGTGTTGCCTAAATTCTGTGTCAGTGAAAATTCTTTTTCTGGATAATTAACTGTTAACATCTTTCTTGTTCTCTGGACCTTCAAAGGGCTTTGTATTTAATACTTGCTCTTTTCCCAGGCTGCTCACGATCAGTTTCACATCTGCCTTGTAGATCACATCTCTTGTGGCCCCCAGAAACAATTCCAGAGGACTCAGTGCCAGTTCGTTCTTCATGGTGAAGGGACTTAGTTGGCCATGAGCAGACCTGGCTGGCTCCCCCCAGTGCTCCCTCTAGGCATGTATGATCCTGCATCCCTCCAGGGATGAGTCCAGAGTCCTCAGGTGGCCAGATTTGGACTTCAGTCACTTTTTCTCTTGGATGCCTTTAAGATGCATTCTGGTGTGGAGCTGGTCGTCAGCTGGGGGTAGGATACCCAAGTCATCCAGCTGTGCACGTGGAGGACAGAAGGCAACTTCAGTCACAGTCCCTGTGCCTCAGCTTCACAAATGATGGTTTTAAAAAACAACAGCAGAGGTGTGAGGCCTGGGTCCCCCTCACAGTGACTTTACCTTCCAGGTCAAGTGGCCGTGCCAATCCAGCACTGCTGCTGTTCAGAGAAGGACCCGAGGGGCATGCCTTGATTGCCAGGACTTACCCACTGGTCTTCCTGGGAGCGGGGCTGAGGTGCCACTGATACTGGGTAGAGCTAGCTAGGCCTAGAGGTCAGGAGTTTTCTAGGCTCTAGAAGTGACCTGACCTTTGAATTACATAAGCCTCTGTGATCTTAGTATTGTCTCTGAGAGCTCCACCAGCCCTTTCCTCTTTCTTGGGTGCAGGAAGGAAGAGTGCGGAAGGTAAGTGGGAGGAGTTTCAGAAAAGCATTACTTACTTACCTTGATAAATTATAACATGAAACAGAATCCACAGTTCTTTCTGAAATCTGTCAAGTATAGTTAAATTTAATATTTTAAAGCTCTGTTCTCAAACCATTATTTCAAGAAGTCATGACTTGTTCTCAGACTCCTCTTAATACTAGGCTCAGTGTTGATACTCCCGGTCTACCTCCCCTGGTAGGTTTTTGGAACCACCTTGGGGACTGTCTGTAGCAGTGTTTCCTGTAACTCCTCCAGGTGACTCTGCATCCTGTATTCCATGGCATTTCTGTGAAGCAGGAGGCAGGGCAGAGGGTGCCACCCTCCTTCAGTAGACTCGGAGAAGTTGTCCGGAAAAGAATAAGTAGGCAGTGATGCTGAATGATTTCTGGGCCTACATTCTTCCCCACACCCCAGACTGCCACCTGGGAGCAGAAAGACTGGTTTGGTCTTTCTGTCAAGTAGCCAGTGTTTGAGACCCTACAGTCCGGTGGCTAGAAAAACAGTAAGAAGGCTCGGCCGTCCTGGATGAAGGGTCAGCATTGTTCTGGCAGGCTTAGCAGCGTGTGGCTGTCACCAGGGACTCCGCTGACCTGTTGTAGCTTTTGGTGTCAGTGAGAGGAGGGATAATCTTGCTTTATTGCTTAGGCTTATTGTGGCATTTGTGGAATATGATCCACACATAGAATCCATGATGCTCTGAACCCCCACCCCCACTGAGTCTCATGCCCTTCCCCCCACCATGGCAAATGGCACTGGGCCCCCTGGAGTTGGGCCTTGGCACCACTCCCACCTCAGGCCCAGCCTGCCTCCCACACATGTCTGAGACACAGCCTTCCTTAAGGAATTTCTCCCCACCTCTACCTCCCCAGCAACCCTCTACGTCCCCACCTGTCCTCTTCCATCCTGTGTCCCTTAGCCCATCTCCTCTCATCTCCCAGCTATAGTTTGTTTGGTTAGTTACTCTGACTACCCCATTTCTTCGTTATCTACCTCTCTCATTATTCCCTACATATTTCACATCCTGAGATTAAAACAACCTGATTTCCCTAAGGATCTCTGTTCATTGCTACCTTCGTTCCCCTTCCCACTTTTCACTTCTGTGTCTGCAAACTTGGCCTCCACCCCATCACATGGGATGAATCGAGGGAAGTCATTGGAGACCAGTCAGTTTCCAAATTCGGAAACCTTTTCCCAATCCTGAATCTGCATGTCCACATTCAGTAACCATAGCATGACGTTGTTGACCCTTCAGTTCAGTTCAGTTCAGTCACTCAGTCCTGTCTGATTCTTTGCGACCCCATGAATCGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCATTCAAACTCATGTCCATCGAGTCGGTGATGCCCTCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTTCTAGCATCAGGGTCTTTTCCAATGAGTCAACTCTTCGTATGAGGTGGCCAAAGTACTGGAGTATCAGCTTTAGCATCATTCCTTCCAAAGAACACCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGATTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGTGCTCAGCTTTCTTTACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGATGGACCTTTGTTGACGAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATCAGTTTCCTTCCAAGGAGTAGTTCAGTTCAGTCACTCAGTCGTGTCCGACTCTTTGCATCTGTTGACCCTTACTTTCCCTATTTTCTGAGATTTCCCTCACTCCTAAACAGTCTTCATTCCTTTTCCTTCTTTGACCTAAAGGCCAGTTCAGCAGAAAGACCAGCTCAATAGGTGGTTTCCAAACTTCAGACCAGCTATGGGACGCATGATGAGGAGGGCAGTTCTTAATACAGATGACTGGGCACTACCCAGAGGTTTATTTAGTAGCTCTGGCGCAAAGCGTGGAAATCTGCCATTTCAGCAAATTCCCTGGATGGTTCCCACACAGGTGGTCCATGGACCACATTTTGAGACACACTCACCCTTAGAGATCAGCACACTTCCTTGACTCGAACCACCCCCTCTTTGCTGAAGTGACTCCCAGCTCCAGCCCTGCCCCTTATGAGTGCATATTTAGGTCTACCTAGAAGCCCTGAGACATCCCCAGACCCACTGCCCCCCAGACCCTCTGCCTGCATCTGTTCTCTTGTCTTTTCCCACCTACTCTGCCACAAGGTCCCCGCATCCACCGTTGTCCCTTTTTGGCCATTGCCCCCCACCCCGCATCTTGTGCTTATGGCCTCCCTGTGGGCATCAGCCTCTGACCTGTCAGCCCACCTCACAGCTTTCCCGCCTCTAACTACCCCCTTGAGACTGCACAGCTGCTAGATTTATCTTCTGAAGATACGCTTCTGCACACCCCTGTTCTTGCAGTGACCAGTGGCTCTCTTGACCAGAGTATCAAGTTTAGACCTTCCTGAGCTTAGTATCCTTGGCAGTCTACCTCCCAGTCGTACATGATGGCCCACTCTGTATAGCCCATCTGTCCACTCACTGCAGCCGCACAATTTCCTCAGTTACCTGTGGGCTCCCACTCCGAGTGAATCTCTTCTCTGCTAAAAATGCCCTTTCTCCCAGATGGCTTCCCCCTCAAAGGCCCGGCCCTGGGTCCTCTGTACCCTTGCCTAAAGCTTCTGAGCAGAAGCAGCCTCATGGTGTCTTGTGACCCCACAGCACTTGTCTTGCTTTCGGCACTTGCCGCTCTGGTTGGTGTCGCTGCGGCTGATTGTGTGCTCTGTCTTACCTCTCTTTCTAGACTGTGAGCTCCTCGTGGGCAGGGCTTTCTGTGTTCACTCTCTGTGTTTCCCACGGCACCTAGCGCAGTGCCTTGCACTTAATAGGTGCTCAATAAAGTCTGCTCAATTGAACT EMBV3_24937 TGACTGAGCCTTCGGTTTCGCCCAGCAAGCGCCGCACCGCGCCAGCTCAGTGAAGAATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02559 CTGGTCTGCTTGAGAAACTTAAAGAACTAGTTTGGCGATCGGCAGCATCTCTGGCCATGC Variant GeneID:513608|ARG1:NM_001046154:4_cdna 197^371 3 EMBV3_30642 GeneID:513608 9 GENE ARG1 MGC128755 arginase, liver EMBV3_13897 CAGGTCAAAAACTGGTTGAACAGAGACCTTCTTTAGGGTTGTGACTATTTCCGTCAGGCC Gene BVT0101_003093 + 0 NULL GK000001.2:59074351-59082201 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02282 CGTGCGCTCCCTCCTGGGCCGCTCGTTAGAGCTCAGCGGCGGAGAATCGCTGCTGGTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18301 ACGTCGTCCTGGATGGTTACCTGTACCCGGCGTGCGCCCTCTACTCGTACCGGTGCCTCT Gene GeneID:100295377|LOC100295377:XM_002699918:26_cdna Constitutive 0 NULL GeneID:100295377 X GENE LOC100295377 NULL hypothetical protein LOC100295377 EMBV3_14777 CAAACCCCAGGAAAGTCCAAAGCCTCCAGACCAACACACTTACAGCCACAGAGTGCCATT Gene GeneID:617104|LOC617104:NM_001046592:104_cdna Constitutive 0 NULL GeneID:617104 1 GENE LOC617104 MGC137000 growth and transformation-dependent protein EMBV3_15206 TCTGCATGTCGCCCATGTTATAGTCGTTGAGGCTGATGTAGATGTACACCAGCATGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_37896 TCTGTCCTGCCGGATCACAGCAGCTATTCCTTCAAACCGAAAACAAGATGGAAGATGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12133 TCTCAGAGTGAAAACCGAAGTTGTAATGGCCACAGGCTTCCTGGCTGCTCCTCCAACACT Gene GeneID:511926|MRPL54:NM_001035105:15_cdna UTR3_Alt 1 NULL GeneID:511926 7 GENE MRPL54 MGC128589 mitochondrial ribosomal protein L54 EMBV3_10058 TTCCTGCCCTTCCCACTCCTCCTCAACACCCCAACTTGTCTGAAGATGTCAACAACCCCT Gene BVV0101_013352 + 0 NULL GK000018.2:16296838-16551051 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39346 TGAGAAAATAAGAACAGGAAGAACTTTTCATTTTACTATAAACTTATTCCACTGTACTCC Gene GeneID:504789|BEND6:XM_002697169:191_cdna Constitutive 2 NULL GeneID:504789 23 GENE BEND6 NULL BEN domain containing 6 EMBV3_32403 CATTCACATCAAGATCAGAGTTCCAAAGAGACTGACAAGCCGGCAGCAGAGCCTGATCCT Gene GeneID:513397|DNAJA3:NM_001080270:147_cdna UTR3_Alt 2 NULL GeneID:513397 25 GENE DNAJA3 MGC143373 DnaJ (Hsp40) homolog, subfamily A, member 3 EMBV3_34706 GTCTGCATTCGCCTGATTGCTGGTCCATATATCTACGGGCTCCTTAGTGGCCTGATGGAA Gene GeneID:100299084|LOC100299084:XM_002692857:5_cdna Constitutive 0 NULL GeneID:100299084 15 GENE LOC100299084 NULL similar to olfactory receptor, family 5, subfamily I, member 1 EMBV3_19428 TAGGAGAATCCTGGTGTTCCAGTGCTTAAGAATCTGCCTGCCAATGCAGGGGACACAGAT Gene BVT0102_091799 + 1 EMBV3_34897 GK000023.2:29072732-29078897 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13775 AAGCAAAGGGGAAAGCTCAGAAATCAAATAAGAAGCGTGATGCATCAGAAGAGGATGAGG Gene GeneID:532850|EIF5B:NM_001038153:74_cdna Constitutive 0 NULL GeneID:532850 11 GENE EIF5B MGC134193 eukaryotic translation initiation factor 5B EMBV3_08172 GTCAGCGTAGCCACTGGAGATGATTGCAAAAGTCCAGGCGATAGTGGACGATCAAGGCTT Gene BVV0102_389503 + 1 EMBV3_22058 GK000026.2:37870246-37895866 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26169 CCTGGCTATCTCAGGGGTAATGGAAAAGAAGCTTACCAGGGGAAAGAACTTGTGGGAGGA Gene GeneID:540396|HIVEP2:XM_002690289:11_cdna UTR3_Alt 2 NULL GeneID:540396 9 GENE HIVEP2 NULL human immunodeficiency virus type I enhancer binding protein 2 EMBV3_23896 GTCTCGGTTTTCTGTTCTGTAAATCAGAGATCATGTGTCTTACCTCCAAGTTGGTGAACG Gene GeneID:100300478|LOC100300478:XM_002695237:29_cdna Constitutive 2 NULL GeneID:100300478 18 GENE LOC100300478 NULL similar to sialic acid binding Ig-like lectin 5 EMBV3_04660 GGAAGAGCCTTCATGTTATTGGACCTGTGTATGAGTAAGCTTGTGGCAGTGATCCTTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24441 AACGACATCTGGGGCTTCAAGATGACCGGCAGATACGAGATGTACGCTCGGGAACTTGCC Gene GeneID:504557|UPB1:NM_001101050:31_cdna Constitutive 1 NULL GeneID:504557 17 GENE UPB1 NULL ureidopropionase, beta EMBV3_21734 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACACCCGCCGC Gene BVT0102_077020 - 0 NULL GK000030.2:61857226-62080024 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39101 AGTGCTTGGGTGGGGAACCCAGTACGGGGCTTAGACATTCCGGGGACCCATTTTTTAAAT Gene GeneID:522105|AHDC1:XM_002685689:344_cdna Constitutive 0 NULL GeneID:522105 2 GENE AHDC1 NULL AT hook, DNA binding motif, containing 1 EMBV3_32031 GGCCATCGCTCTCTGGAATAACATGCTAGAACCCTTGGGCCATAAGACCACCTCCAACAA Gene GeneID:506508|PLB1:XM_002691496:425_cdna Constitutive 1 NULL GeneID:506508 11 GENE PLB1 NULL phospholipase B1 EMBV3_30233 CTTATCTCAGCTACAACATGCAAGAAAACCCTCCTCATTGGACTCTGGGCTGGACCAAGC Gene GeneID:514213|OBFC1:NM_001076849:129_cdna Constitutive 2 NULL GeneID:514213 26 GENE OBFC1 MGC143179 oligonucleotide/oligosaccharide-binding fold containing 1 EMBV3_01226 GCTATTCTCAATACCTCTGTGGCCCCCATGCTGAACCCCTTCATCTACACCCTGAGAAAC Gene GeneID:100300099|LOC100300099:XM_002687610:721_cdna Constitutive 0 NULL GeneID:100300099 5 GENE LOC100300099 NULL hypothetical LOC100300099 EMBV3_03178 TGTCGCTGTCGAGGCACACGCCAACGTCCTTCTCAGCGAATGGTTTGCTGCACTTAATTT Gene GeneID:100294954|LOC100294954:XM_002692182:56_cdna Constitutive 0 NULL GeneID:100294954 13 GENE LOC100294954 NULL hypothetical protein LOC100294954 EMBV3_35341 GGTCCGGGGAGGCGGCGGCGCCAGCGATAGCCAGACACTGACGGCCCCAGGGCCAGGACT Variant GeneID:505159|FDX1L:NM_001080226:303_cdna 150^596 7 EMBV3_18643 GeneID:505159 7 GENE FDX1L MGC152067 ferredoxin 1-like EMBV3_02915 TTCTGGAGCCCGTGTGACACAACAAAAGAACTCATACAAGAAAGACCCCGGGAGCTGCAA Gene BVT0102_033145 + 1 EMBV3_27231 GK000009.2:54751379-55015377 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00954 TTTGCCTTGTACTGAAGCCTACCAGATACCAAAATATTTCCTCTCTTCCCTCAACACACG Gene BVV0101_065463 + 0 NULL GK000023.2:10045048-10099946 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24570 GAGCCGAATCTCCTCACCGCTGCTCTGGGACACGCCTCTGTTGGATTTAATTTACAGTCA Gene GeneID:100299071|LOC100299071:XM_002694863:824_cdna Constitutive 0 NULL GeneID:100299071 18 GENE LOC100299071 NULL hypothetical protein LOC100299071 EMBV3_35368 AACAAAGCTTATCTATAAGGATCTAGTGAGGATTCGGTTGGTGTGTGCTACCCTTCAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12816 AACCCTGCCGACAGTCTGGCTCCAAGTTATTTCCAGAGCCTTCGAGAGCGCCAGCTAGGA Gene GeneID:507581|MGC142702:XM_002687585:656_cdna Constitutive 0 NULL GeneID:507581 5 GENE MGC142702 NULL hypothetical LOC507581 EMBV3_20525 AGATAGTTCCTGTGACGTGTCCTATTTGTGTGTCTCTTCCTTGGGGAGATCCTAGCCAGG Gene GeneID:538445|RNF138:NM_001038174:106_cdna Constitutive 0 NULL GeneID:538445 24 GENE RNF138 MGC134026 ring finger protein 138 EMBV3_01256 AGTGCTCTTCTGGCTTTCAGAGGAATTTCTTTGTGAGTACAGAAGTCCTCCAAGCCCAAG Variant GeneID:535421|ELMOD3:NM_001015661:119_cdna 533^602 1 EMBV3_43750 GeneID:535421 11 GENE ELMOD3 MGC166404 RBED1 ELMO/CED-12 domain containing 3 EMBV3_42499 AATTGGCAAAATGCACCCTGACATTCCAGTTTCCGTGATCTTCGGCGCCCGATCCTGCAT Gene GeneID:535588|ABHD5:NM_001076063:167_cdna UTR3_Alt 2 NULL GeneID:535588 22 GENE ABHD5 MGC142582 abhydrolase domain containing 5 EMBV3_19557 CTGCTATAGTGGCTAAAGATAGAAACCCAGGGCAGCGGGTCATCTGTGTGGAAGGAGACA Gene GeneID:512676|HACL1:NM_001098949:8_cdna Constitutive 0 NULL GeneID:512676 1 GENE HACL1 MGC160090 2-hydroxyacyl-CoA lyase 1 EMBV3_22281 GGCATCAGCACTGTTTCAGGGGATGATTTTGGCTTGATACCTAGATCCCTGTTCTTGGGT Gene GeneID:540274|RNF14:NM_001081540:29_cdna UTR3_Alt 3 NULL GeneID:540274 7 GENE RNF14 MGC155209 ring finger protein 14 EMBV3_08964 GACTACAATGTTAGATTTGGAGGCAGCTTCAGACTGATTGGTGGTAACTACTTGCTGAGC Gene GeneID:615197|PCNP:NM_001038205:26_cdna UTR3_Alt 2 NULL GeneID:615197 1 GENE PCNP MGC128940 PEST proteolytic signal containing nuclear protein EMBV3_08830 TCCCAAGCGCAGGAGCTTTGAAGTCATTTGTCCCTCTCCGGTTGGATCGACTTCTTATTT Gene BVT0102_080741 + 1 EMBV3_29279 GK000016.2:63691627-64095721 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067958 1 XLOC_041567 Coding TCONS_00067958 XLOC_041567 NonCoding Coding CACNA1E 16:64094629-64095804 o TSS50979 1175 1 TCONS_00067958_2 59 1 0 0.00311367855476002 0.000551635990813284 0.000792315666064089 0.000942802020891195 0.00231473023147828 0.000181995665789852 9.90404096130255e-05 0.000581856273730664 0.000255806366953218 8.40493757681517e-06 3.89649510247058e-06 0 2.19774869643696e-05 0.00100827469048637 0.000881030579405917 0 0 0 0.00163683168420301 0.000845991861787691 0.000157185631532778 0 0 0 0.00129972886847991 0.00111873600271242 0.0048779970092224 0 7.38744664130862e-05 9.84984736481493e-05 XM_005217268.1 CACNA1E PREDICTED: Bos taurus calcium channel, voltage-dependent, R type, alpha 1E subunit (CACNA1E), transcript variant X1, mRNA. 8e-35 152 100.00 0.0706382978723404 XM_005245477.1 CACNA1E PREDICTED: Homo sapiens calcium channel, voltage-dependent, R type, alpha 1E subunit (CACNA1E), transcript variant X1, mRNA. 0.0 688 88.70 0.422978723404255 0 noncoding 0 0 0 0 -0.0185379828613654 0.865425124673148 -0.00945589465297687 0.856078925358699 TCTCCCCCTCCTCGCCTTTCCCGGTCTCCCCGTTCCCTATCTTCTTCTCTGCTCCATCGAGGGGAGAGCTGCCGGGGTGGAAGAGGAAGACCGAGTCATCAGTGAGCAAGTTCGGTCCCTGGACAACTCGCGTGCCAGGCCACCGCTGGGCTCGGCTGCAACCTGTTCCTCCCTCGCCCAAGAGCTCTCCCGCCCGCCCGCTCGCTCCCGCCCTCTCCCCGGCGCAGCCGCGGATCGCTGTTGCATGCTGATCCGGGGAGGCGGCGGCGGCGGCGGCGGCGAGCGCTCCGGGAGGATGCTGGCACTCGGGCTTCGCCGCTCTCTGGATGCTTTTCAACTTCTCTCCCAAGCGCAGGAGCTTTGAAGTCATTTGTCCCTCTCCGGTTGGATCGACTTCTTATTTTGATATTTTGGGCGTTGCGGTTTATGCAGGAACCTCAATACAGCTCTCCTCCCTCCCTCCCTGTCTCCTCCACCTTTGGATGCGTCTGTGCTGGCAGGTTTAAAGACCCAAGTCTTGGTTGTGGAATTTCTTAGATGGACTTGCAGGGGCCGGCGTTATAAAGCATGTCACCGTAACCTTGTCCTTGTCTTTTTTTTTTTTGAAAAGTTCTTTTGTTTTCATTTTTCCCCTCCCCCCACCATCAATAAATTACCAAACTGTTACCTAGCGGGCCGGTGCCTGCCTCTCTCCCAGAACTAGGTGGTGCGTCTGCCAGAAGAGGAGCTATGTTTGAAGAGCAGCCTACTCCACCCCTCTTCTCTCCAGTCCCTGAACGCCACCACACACTGGCATTTTGAAAAAAAAAAAAAATTGTCTCCAGAAACGGAGCACCCCCAAGCTCTCCCCCCCCTTTTTTTTCCTCCTTGAGGAATGGAGCTTCGCAGAGGTTGCATTTAGATTCAACAGTTCAGAGCGGCGGGGTTGCTGCTGCCGCCTCTCCGAAGAGCTCGCGAGGCTCCCCGGAGGCGGTGGTCCCCGTGCCCGTCTGGATGCGGCTCTGAGACTCCGTGTGTCTTTCTGCTTGTTGCTGTGTGCGGGTGTTCGGCCACGATCACCTTTGTGTGTCTTCTGTCTGTTTAAACTTCAGGATGGCTCGCTTCGGGGAGGCGGTGGTCGGCAGGCCGGGGTCGGGCGATGGAGACTCGGACCAGAGCAGGAACCGGCAAGGAAC TCONS_00067964 s 5' 0 TCONS_00067964 s 5' 0 EMBV3_35896 TCGGACTCTGTGCGACCCCATAAACTGCAACCCACCATTCCTAAGTATCCCAAGCTTCCT Gene BVV0102_274562 + 0 NULL GK000006.2:20350228-20415892 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202656 1 XLOC_124016 Coding TCONS_00202656 XLOC_124016 Coding Coding - 6:20413367-20419542 - TSS152017 4457 1 TCONS_00202656_4 254 0.431904868745793 2 0.278425655976676 0.0270270298815758 0.0149865158895604 0.0130778576431342 0.019761933710199 0.0144434882641293 0.00615966831482716 0.0119995908083117 0.0138433176629086 0.0143214003780383 0.00292709021044607 0.00176421575049242 0.0010015760783807 0.00469100896083006 0.00787840110729116 0.00500133686966896 0.000200098959422593 0.000245451621794863 4.49239194474459e-05 0.00210870854972132 0.00707772767324038 0.00164317310937604 0.000259376831262855 0.000307676937452921 4.38529047779441e-15 0.00412065217127972 0.00236014498100079 0.00426167831692445 0.000260809270644281 0.000330438316630143 0.000205298731853208 XM_005203639.1 TPM3 PREDICTED: Bos taurus tropomyosin 3 (TPM3), transcript variant X14, 0.0 2915 90.55 0.455463316131927 NM_153649.3 TPM3 Homo sapiens tropomyosin 3 (TPM3), transcript variant 2, mRNA. 0.0 2226 83.36 0.451200358985865 TCONS_00202656_4 sp|A6NL28|TPM3L_HUMAN TPM3L_HUMAN Putative tropomyosin alpha-3 chain-like protein; 9e-114 330 76.31 0.97244094488189 2 coding 0 0 0 0 -0.858912326561696 0.0126698410400563 -1.06405010848439 3.52673399974048e-05 GGCACTCATGAAGCTATTAGGGAAGGCAGGGAGCTTCTCCAGGCAACTATGATCCAAAACCGTCCTCCCTAAGGCAGTGATTGTCTAGAATTAGCGTTGAAATCACTGCAGGGCTGCCGAAACCCAGACCGCTGTGGATCCGCCCTGAGATTTTGATCCACCTCCGGGTGGGCCTAGGAACCTGCATTTCTGGTCCATTCCCTAGTGATGCTGATTCTGCTGGTTCCAGGACCACACTGTGAGAACCCACTGTTCTCAAACATGGTCAGCTGGGTAGACTTGTTGCACAGGGCCTTACATGTAGGAAAGGCTCAGGTCTGTAGAAAATTTTTATATTCTAAAGTGGTGCTTTGAAAACCCGAATGGGCAGACAGGTCACCTAGGGACTCTTGTTACTTGTGGATTGTGCTTCATTAGGTTTAAGATGGGCTCCTGAGTCTGTTTCTAAAGGCACACAGGTGGTGCTTGTTCTACTGGTCTGCTGACCATAATTTGACTAACAAACTGAAAGGTACAGCCCACGGGTATGCATTTGATTTCTATTAAAGAAGAAGTAGAAAAGGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCGGACTCTGTGCGACCCCATAAACTGCAACCCACCATTCCTAAGTATCCCAAGCTTCCTACTGTCAGCTTTGACTGTGCATGCTCTTCGCCTAGTGTGGGCCACAAGTTCAACCCTGCAGGAACCAAGCGGCTGCAACGCCGAGCGCCGAGCGGAGGAGGCAGGAACCCGAAGGCAAGCAGGAGCTGGGTGGGGACCATGGCCGGGACCACTGTCATGGCCGCGATCGCTGTCACCGAGGCAATGAAGTGCAAGATCCAGGTTCTGCAGCAGCAGGCCGATGATGCAGAGGAGAGGGCCAAGCGCCTCCAGCAGAAAGTGGATGGAGAAAGATGGGCCCGAGAACAGGCTGAGGCTGAAGTGGTCTCCTTAAACCGTAGGATCCAGCTGGTTGAAGAGGAGCTGAACCGAGCTCAAGAGCGCCTGGCCACTGCGCTGCAAAAGCTGGAGGAAGCTGAGAAAGCTGCTGATGAGAGCGAGAGAGTTATGAAGGTTATTGAAAACCAAGCCTTAAAAGATGAAGAAAAAATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAGGCACACAGGAAGTATGAAGAGGTGGCTCGCAAGTTGGTGATTATTGAGGGAGACTTGGAGCGCACAGAGGAGCGAGCGGAGCTGGCACAGTCCCGTTGCCGAAAGATGGGTGAGCAAATCAGACTGATGGACCAGCACCTGAAGTGTCTGAGTGCTGCTGAAGAAAAGTACTCTCAAAAGGAAGACAAATATGAGGAAGAGATAAAGATTCTTACCGAAAAACTCAAGGAGGCAGAGACTCGTGCTGAGTTTGCTGAGAGATCAGTAGCCAAGCTGGAAAAGACAATTGATGATTTGGAAGATAAACTGAAATGCACCAAAGAGGAGGACCTCTGTACACAAAGGATGCTGAACCAGACTCTGCTTGACCTGAATAAAATGTAGAGCACCCCAGCCCCGCCCTGCCGCTGCTCCTCCCTCTCACCCCGACTCCGACTCCACTGGGGCCAGCCTGCCCGAAGCTGACCACCCCCCTACTCCTGTGTCCTTTTCGCCAGTCTCTGCTTCTCCCCAGAGATTCCAGGTGGGCTAGAGGCTGAGCACCTTTGGGAACAACGTTTAAGGGAATGTGAGCACAATGCAAAGTGTCTTTAAAAGCATGTTGTGATGTACACATTTTGTAATTACCTTTTTTGTTCTTGATGTTACAACCATTTGTAAAAAAACATTCCAGATAATTCCGTAGAACTGAAGCAGCAGTCTAATCCCTTTCTCACTTTTGGAAGGTAACATTTCAGCTTAATTGCCTTCTCCAGAGAGAAAGGGAAAAGGTTTGGGCCTGCCTTACTGAGAGCCTAGCAGCCCAGAGAAAGGCTCCATTTGGGGAAACCTCATTGCCCTGTAAAAAGTACCTGCCAAAGCAGAAAGATGATTCCAGAAGGAGTTAGCCAAAAAAAAGTGCTGTTCAGGTTTTCAGCTTTACGGTATCTTTGGACAACTTTTTTTTTTTCTTTTTTCATCAGAAGTGACCAAACAATTAAGATGGTAAAACCTCTGAGACCAAATCCTTGTCCCAGCTCTACCCTGTTCCCAACTACTAATGGATCATGTGCCCCTTATATTGAAGTGACCACTTATTTGCTCTCCTGCCTCCTTGAAAGAAAGGAAAGAAAATTATGTTTTGCCACTGATTTAGCCATATGAAACTCATCTCATCACCCTTTTCTGGGTCTGAAGCTGCTGTCTCTAAAAGTGCCATCTCACTGTGCTTTGTATTGGTTAGTGCTGGAGAAATCTTGAAAAGCGTATGTACAAAACTTGTAAATTTTTATATTTTGGAACTTTGCTTCTTTGGGGTTGAGGCAAACTGGTCACCCCTCTGCCTGTGAGAGCTCTCTACAGTCTGTGGGCTAGCAGTGTGCTGATCTTTTAAAGTTTCTTTCCCTACCCAATCCCCCTTTTTTGATGAGGTTTCAGTGAGGTCTGTTAGGGGTGCATCCTGCAGCTTAATTGGCTTAAAATGTCCTCTCCTTTGGTGTGGTCTCTTTGGGGACCAATTGGGAGAAAAAAAACCAATAGTGTAACTGTTTTGATACTGAAAATTGATAAATGTCTTTTTGAAATAACCAGTCCCTCCAAAATAAATAAATCCAATATGACAATCTCTTTATTTTTTTTTAATTTATTTATCTTAATTAGAGGCTAATTACAATATTGTATTGGTTTTGCCATACATCAACATGAATCCGCCACGGTGTGCACATGTTCCCAATCCTGAAACCCCCCTCCCACCTCCGTCCCGGTACCATCCCTCTGGGTCATCCCAGTGCACCAGCCTCAAGCTTCCTGTATCCTGAATCGAACCTGGACTGGCAATTCGTTTCTTATATTATACATGTTTCAATGCCATTCTCCCAAAACATCCCCCACCTCCACCACAGAGTCCAAAAGACTGTTCTATACATCTGTGTGTCTTTTGCTGTCTCCCATACAGGGTTATCATTACCATCTTTCTAAATTCCATATCTATGCATTAGTATACTGTATTGGTGTTTTTCTTTCTGGCTTACTTCACTCTGTATAATAGGCTCCAGTTTCATCCACCTCATTAGAACTGATTCAAATGTATTCTTTTTAATGGCTGAGTAATATTGCATTGTATATATGTACCACAGCTTTCTTATCCATTCATCTGCTGATGGACATCTAGGTTGTTTCCATGTCCTGGCTATTATAAACAGTGCTGTGATGAACACTGGGGTACACGTGTCTGTTTCAGTTCTGGTTTCCTCAGTGTGTATGCCCAGCAGTGGGATTGCTGGGTTGTATGGCATTTCTATTTCCAGGTTTTTAAGGAATCTCCACACTGTTCTCCATAGTGGCTGTACTAGTTTGCATTCCCACCAACAGTGTAAGAGAGTTCCCTTTTCTCCACATCCTCTCTAGCATTTATTGCTTGTAGACTTTTGGATCACAGCCATTCTGACTGGCGTGAAATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATAATGAGTGATGTTGAGCATCTTTTCATGTGTTTGTTAGCCATCTGTATGTCTTCTTTGGAGAAATGTCTATTTAGTTCTTTGGCCCATTTTTTGAGTGGGTCATTTATTTTTCTGGAATTGAGCTGTAGGAGTTGCTTGTATATTTTTGAGATTAGTTGTTTGTCAGTTGCTTAATTTGCTATTATTTTCTCCCATTCTGAAAGCTGTCTTTTCACCTTGCTTATAGTTTCCTTTGTTGTGCAGAAGCTTTTAATTTTAATTAGATCCCATTTGTTTATTTTTGCTTTTATTTCCAATATTCTGGAAGGTGGGTCATAGAGGATTCTGCTGTGATGTATGTCGGAGAGTGTTTTGCCTATGTTCTCCTCTAGGAGTTTTATAGTTTCTGGTCTTATGTTTAGATCTTTAATCCATTTTGAGTTTATTTTTGTGTGTGGTGTTAGAAAGTGTTCTAGTTTCATTCTTTTACAAGTGGTTGACCAGTTTTCCCAGCACCACTTGTTAAAGAGATTGTCTTTAATCCGTTGTATATTCTTGCCTCCTTTGTCAAAGATAAGGTGTCCATAGGTGCATGGGTTTATCTCTGGGCTTTCTATTTTGTTCCATTGATCTGTATTTCTGTCTCTGTGCCAGTACTGTACTGTCTTGATGACTGTGGCTTTGCAGTAGAGCCTGAAGTCAGGCAGGTTGATTCCTCCAGTTCCATTCTTCTTTCTGAAGATTGCTTTGGCTATTCGAGGTTTTTTGTATTTCCATACAAATTGTGAAATTATTTGTTCTAGCTCTGTGAAAAATACTGTTGGTAGCTTGAT TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 r 3' 30260 TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 r 3' 36434 EMBV3_43677 CTTGTAACTGATCAAAACATTTCAGATAATGTTACCAAAGAAGACTTTGTCACTTTTGAT Variant GeneID:280977|ACP1:NM_173978:8_cdna 120^233 5 EMBV3_05038 GeneID:280977 Un GENE ACP1 MGC128334 acid phosphatase 1, soluble EMBV3_24337 CACCCAACACGGGAGCACCGCAGTATGTAAGACAAATGCTAACAAGTATGAAAGGAGAAG Gene BVT0102_329366 - 1 EMBV3_35130 GK000001.2:42173699-42201556 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00210178 TCONS_00233373 TCONS_00010367 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00200531 TCONS_00022064 TCONS_00198662 TCONS_00088289 TCONS_00078532 TCONS_00056147 TCONS_00089425 TCONS_00116799 TCONS_00250553 TCONS_00019991 TCONS_00098385 TCONS_00189806 TCONS_00165811 TCONS_00032587 TCONS_00148253 TCONS_00197973 TCONS_00141355 TCONS_00070841 TCONS_00031938 TCONS_00207228 TCONS_00239410 TCONS_00177994 TCONS_00141464 30 XLOC_131641 XLOC_128688 XLOC_142855 XLOC_005918 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_012735 XLOC_120316 XLOC_053076 XLOC_047420 XLOC_033950 XLOC_054210 XLOC_070965 XLOC_153496 XLOC_010669 XLOC_058631 XLOC_115843 XLOC_100651 XLOC_018827 XLOC_090135 XLOC_119632 XLOC_085783 XLOC_042618 XLOC_018183 XLOC_125746 XLOC_146076 XLOC_107767 XLOC_085892 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_25619 AAGGACGTCGGTAAGGCTCACCCAGTATTTCCCAGCTGTACTTCTTTTTGAGAGCTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05493 AAAGGTGCATATGACGTGTTGAGCGTCTCTCTGGGGAGGAGGCTGGGGTTTTGACTAAAT Gene GeneID:529295|PSAPL1:NM_001103267:44_cdna Constitutive 0 NULL GeneID:529295 6 GENE PSAPL1 MGC159958 prosaposin-like 1 EMBV3_29931 CGTTTTCAGCGTTGCTGTGGCTTTGTTGTATTTCTATCAGCCTGTTAAGTTGCCGTTCCC Gene BVV0102_046080 + 0 NULL GK000028.2:480226-492287 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159888 TCONS_00159890 TCONS_00159887 TCONS_00159885 TCONS_00159886 TCONS_00159893 TCONS_00159892 TCONS_00159889 TCONS_00159894 TCONS_00159891 1 XLOC_097532 Coding TCONS_00159888 XLOC_097532 Coding Coding ABCB10 28:490580-503148 j TSS119721 2848 1 TCONS_00159888_5 128 0.100772471910112 7 0.773931725948914 0.0032945500896452 0.00321590637887053 0.00212205343144268 0.00115822408813281 0.00164018670207328 0.00032318008191545 0.00121909326341387 0.00147298718414212 0.00154830908767692 8.73414302187597e-05 1.66393193175193e-08 7.60771846974168e-05 0.000165709963269287 1.04004751905866e-07 0.00106687923289379 0.00167888648090005 1.06866188820919e-115 1.57481293557476e-09 0.00312699933120433 0.0040677611500661 8.01556697978777e-06 0.000114730353152303 0.000585237693538679 6.91395780651583e-17 0.00434893466477445 0.00467265552956221 0.0029024836777848 1.44719278557332e-35 1.66611509166467e-16 1.63610279310751e-137 XM_001256448.4 MDR/TAP PREDICTED: Bos taurus ATP-binding cassette, sub-family B (MDR/TAP), 0.0 4861 100.00 0.945926966292135 NM_012089.2 MDR/TAP Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 0.0 1353 83.76 0.447331460674157 0 coding 0 1 0 0 -0.216771156284234 0.719756838848583 -0.0357074122883525 0.503182671263118 TCTGAGGGCTGTGAGGCTCCAGCATAGTGGCCAGTGTGCTGTGCTGCTGGTACAGAGCAGGCTCGGGAGCACGGGACTCAGCTTCCTCCTGACTGGCCTGCGAAGTGCCCAGACTCCAGAGCTCGCTGTGCTGGGCCGAGGCCGTGGTCAGAGGGAGCTGTTTTGAATGAGAAAAGCTTCCAGGGTGCTTTGGAGTTCAAGAACGTGCATTTCGCCTATCCAGCTCGTCCAGAGGTGCCCATATTCCAGGATTTCAGCCTTTCTATCCCATCAGGATCTGTCACAGCACTGGTTGGCCCAAGTGGTGCTGGCAAATCCACAGTGATTTCCCTCCTGCTGAGATTGTACGACCCTGCTTCTGGAACAATCAGCCTTGATGGCCATGACATCCGTCAGCTAAACCCAGTCTGGCTGAGATCCAAGATTGGGACAGTGAGTCAGGAGCCAATTTTGTTTTCTTGCTCAATTGCGGAGAACATTGCTTATGGTGCAGACAACCCCGCCTCAGTGACCGCTGAGCAGATAGAGCAGGCAGCCGCTGTAGCCAATGCAGCTGCTTTCATCCAAAATTTCCCTCAAGGATTCAGCACTGTGGTCGGAGAAAAGGGCGTTCTCCTCTCAGGTGGACAGAAACAGCGAATTGCAATTGCCCGTGCTCTGCTTAAGAATCCCAAAATTCTTCTCCTAGATGAAGCAACCAGTGCCCTGGATGCTGAGAATGAGCACCTCGTACAGCAAGCTCTAGACCGACTGATGGAAGGAAGGACAGTGTTCATCATTGCCCACCGTCTGTCCACGATTAAGAACGCCAACGTGGTAGCTGTCCTTGACCAGGGGAGAATCATCGAGTGTGGGAAACATGAAGAGCTGCTTTTGAAACCAGATGGGATGTACAGGAAATTAATGAACAAACAGAGTTTTATTTCAGCATAAAGAAGCAATTACTGGTATGAGAGGTTTTAAAGCAAAGCTGCACTGCAAGGGGAAAAAAAAAACTCAGACTGTATGAAATCTGTAAATCAGAGTTCAAGTCCTTTGAAATCTGCCTATTTTTTCCAGAGTTTGTAAAATAGTTTTGAGATGGATCTGTTCTGAAGACCTTTTTATTCAGAATTTATTAATTATAACTTTCTAAATGGTCTAGAGCACTGAAGTTATTTTCAGGTTTTGTATTTTATTTTATCTTAGAATATTTTGATTAATAGAGCATGGCACTTCATTTTCTTTTATCTGCTGTCATAAATTGAAGCTGTTGTCATACGACAACTTTTAAAGGAGAATTACAGATAAAAAGCCTAGTTATTTTAGGCCAGTTCACCAGCCACTGTGTATCTCATGGTAGTACTCTACCTACTTTGGGTCTCATCTTACCAGGTAGCATGAGAGACGGTGGAAAATCTAACCCTTTATTTTATCCTGCTAATCTCATAAAGAAAAGTATATATGTATTGTTTAATTGCTAAGTCGTGTCCAACTCTTTGCAGTCCCACGAACTTCAGCACACCAGGCTTCCCTGTCTTTCACCATCTCCTGGAGTTTGCTCAAACTCATATCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGCCCCTTGTCCTGCCCTCTATCTTTCCCAGCATCGGGGTCTTTTCCCCTGAGTCAGCTCTTCACATCATGTGGCCAAAGTATCGGAGCTTCAGCTTCACCACTAGTCCTTCCAGTGAATATTCAGGACTGATTTGTTTTAGGAAATATATATATACAGAAATAGGTAATGTCACATGGCAAGGCGGGGTCATTTATATTCCTGTCTCCTCTGTCTTCAAAGGGATGAAAGTATAGGAATATGTGTTCCTCTGGGCTGAGACTGTGTTGCCATGTGTGCAGTTTTTCGCATTTTTGGCACTTGAGAGCCTGATGAATTTTAAAAAGGGAAGAAGCCCCATCCTTTGAATATGAGAACTCTGTTTTCATTATTCGTGTATTTGGGAAGTGAGGCATGAACTGCCAGGAATTATCAAAAAAGATGTAATTTTACACTTAGATTGTCTGTAGGCATGTATCTTGAAAATTATCTTTTAAGAGTTTATAATTCCTAGTCAAATTTTACAGTGTTTTTTCAGTTAAATAGTTATGAAATTTCATTCAATGAGGCTAAATTCCAAAATTATTAATATAGCCGTAATTTCAATCTTAAAACATTTGAAGGAAGCTTATACATTCTACAAAATGTCAAGAAACCTTCAGAGCTTTTCACCCTCTGAAAAGAGGATATAATTAACCATCTTTCTTTTATTTGTTATTACAGTTAAAGCTAAACTTCTCAAAAGTTCCCAAGCAACGTTTTCAGCGTTGCTGTGGCTTTGTTGTATTTCTATCAGCCTGTTAAGTTGCCGTTCCCTCAAGAAAAAGTACTTTTCTGTAATGATAATGTCAGAACCTAAGAAGTAACAACATTGATATGACTGAAAAGGAAGTTTTCTCAGGTCCTAAGTATTGTGATTAGCTTCCTGATTATACTGGGAGAAACCACTACGTCCTGATAAGCATGGAGCATCAGCTTTTATTCTACATAAGGGAATTCATTAATGAATTCAGTGAATAAATGAACTCTGCTTTTTGAATTTAAACAGTACCTCTGTGACAGTCATCTTTAACAAGCTTTACTCATGTTCTTCAAGGTTTACTACTATGGTGGTGTTCTCAAAAAGCAGACAAAACACAACTACAAGGTTGGATCTGAAGGAAATCTCTTTGTGCCATAGTATTTACAAAATTGAATGTGATCATTATATTTTATTTTCTAATACAAGGTATTCCCTTTTATATGATGGATTAAAATTTATAGTGAACTTTATCT EMBV3_40711 ACAGTGTGAGAGGCCAGCCCCAAAGAGCAGCAAGTCTGACCATATCAGCACAAGAAGCAT Gene GeneID:100298057|LOC100298057:XM_002685403:28_cdna Constitutive 0 NULL GeneID:100298057 2 GENE LOC100298057 NULL similar to fat EMBV3_29729 GTTGGCCTGCAACAGAGTGGTTCTGTAGCCAAAGAAAAACCAAGGTGGACACAAACAGGA Gene BVT0102_076237 + 0 NULL GK000010.2:43840995-43871172 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36196 ATCAAGGCTTATGAACAGCTCAACGTGAAACATGAACCCCTCCAGCTCATCCAGCCTCAG Gene GeneID:513908|IFT52:NM_001038101:1036_cdna Constitutive 1 NULL GeneID:513908 13 GENE IFT52 MGC134194 intraflagellar transport 52 homolog (Chlamydomonas) EMBV3_16339 TCAAATGCCATGAGAGCCATGAATGGAGAGTCTCTGGATGGTCGTCAGATCCGTGTAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02272 TGTAGGAGGACTGACAAATGGTAGTGGTCGATATATCTCTGCAGCACCTGGAGCAGAAGC Gene BVT0102_370635 + 0 NULL GK000011.2:78594570-78658785 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025629 TCONS_00025626 TCONS_00025645 TCONS_00025630 TCONS_00025632 TCONS_00025643 TCONS_00025635 TCONS_00025647 TCONS_00025625 TCONS_00025637 TCONS_00025646 TCONS_00025641 TCONS_00025628 TCONS_00025648 TCONS_00025633 TCONS_00025634 TCONS_00025627 TCONS_00025640 TCONS_00025638 TCONS_00025639 TCONS_00025631 TCONS_00025636 1 XLOC_014797 Coding TCONS_00025648 XLOC_014797 Coding Coding PUM2 11:78579469-78670099 = TSS18559 6219 1 TCONS_00025648_7 1007 19 0.931589226406559 0.000572564373561715 0.00132929079447387 8.63108769881738e-09 0.000382937198437048 0.00107794378205599 0.000491436394728232 0.000670158601554283 0.000546143027678594 2.49996960676444e-05 0.000154724977980471 5.63951429215811e-05 0.000173331111649681 3.05250121686267e-28 0.000224103786514524 9.63797236175819e-20 0.000624265285132539 0.00580689211605902 0.000162782495716847 0.00111223467544198 0.000184494281760886 0.00033199001857879 1.8647183892083e-08 0.000882859999217284 0.00148580967093188 4.05394595096953e-13 6.35389633898293e-10 0.00130584854691086 0.000292522163491078 0.000259305917920909 0.000599061467215033 XM_005193970.1 PUM2 PREDICTED: Bos taurus pumilio homolog 2 (Drosophila) (PUM2), 0.0 1.061e+04 100.00 0.945489628557646 NM_001282752.1 PUM2 Homo sapiens pumilio RNA-binding family member 2 (PUM2), transcript 0.0 8583 91.95 0.958835825695449 TCONS_00025648_7 sp|Q8TB72|PUM2_HUMAN PUM2_HUMAN Pumilio homolog 2; 0.0 1694 98.02 0.999006951340616 1 coding 1 1 1 1 -0.0102495070496326 0.920328408104528 -0.00570695352705058 0.910040924036277 GTTTGATCTGTGGATGAAATGAATCATGATTTTCAAGCTCTTGCATTAGAATCTCGGGGAATGGGAGAGACCATTCAATGTCCCAGCCTATTATGGTACAGAGAAGATCTGGACAGGGTTTTCATGGAAACAGTGAAGTAAATGCAATATTGTCTCCGCGATCAGAAAGTGGAGGCCTTGGTGTGAGCATGGTAGAATATGTATTAAGTTCTTCTCCTGCTGATAAATTGGATTCTCGATTTAGGAAGGGAACTTTTGGCACTAGAGATGCTGAAACAGATGGACCTGAGAAAGGAGATCAAAAAGGCAAGGCTTCTCCATTTGAGGAGGACCAAAACAGAGATCTTAAGCAAGGAGATGATGATGATTCTAAAATAAATGGCAGAGGTTTGCCAAATGGAATGGATGCCGATTGCAAAGATTTTAATCGTACTCCTGGAAGTCGTCAAGCCTCTCCAACTGAAGTAGTTGAGCGCCTGGGCCCCAATACTAATCCCCCAGAAGGACTGGGGCCTCTTCCTAATCCTACATCTAATAAACCACTTGTTGAAGAATTTTCAAATCCTGAAACTCAGAATCTGGATGCCATGGAACAAGTTGGTCTGGATTCCTTACAGTTTGACTATCCTGGTAATCAGGTACCAATGGACTCTTCAGGAGCTACTGTAGGCCTTTTTGACTACAATTCCCAGCAGCAGCTTTTTCAGAGGACTAATGCACTAACAGTTCAGCAGTTAACTGCAGCTCAGCAGCAGCAGTATGCATTAGCCACAGCTCAGCAGCCACATATAGCTGGTGTATTTTCAGCAGGCCTTGCTCCAGCTGCATTTGTGCCAAATCCATATATTATTAGTGCTGCTCCTCCAGGGACTGATCCGTATACTGCAGCAGGATTGGCTGCAGCAGCTACATTAGCAGGTCCGGCAGTGGTTCCACCTCAGTATTATGGTGTTCCGTGGGGGGTGTATCCAGCCAATTTATTTCAGCAGCAAGCTGCAGCTGCGGCAAACAACACCGCAAATCAACAAGCAGCATCACAAGCTCAGCCTGGACAGCAACAGGTTCTCCGTGCTGGGGCAGGTCAGCGCCCTCTTACTCCCAATCAGGGCCAGCAAGGGCAGCAAGCTGAATCACTTGCAGCAGCAAATCCAACTTTGGCTTTTGGTCAGGGTCTTGCTACCGGCATGCCAGGCTATCAAGTACTAGCTCCAACTGCCTATTATGATCAGACCGGTGCCTTAGTGGTTGGCCCTGGGGCAAGAACTGGCCTTGGAGCTCCAGTTCGATTAATGGCTCCAACACCTGTTTTAATTAGTTCAGCAGCAGCACAAGCTGCAGCGGCAGCAGCAGCTGGAGGAACTGCAAATAGTCTCACAGGCAGCACAAATGGTCTGTTCCGGCCAATTGGCACTCAGCCACCACCGCAGCAGCAGCAGCAGCAGCAGCCAAGCACTAATCTGCAGTCTAATTCATTTTATGGGAGCACTTCTCTGACTAATAGCTCCCAGAGCAGTTCTTTATTTTCTCACGGACCTGGCCAGCCTGGAAGTACATCTCTTGGCTTTGGAAGCAGTAGCTCTTTGGGTGCTGCTATAGGCTCAGCCCTCAGTGGATTTGGTTCATCAGTTGGCAGTTCTGCAAGTAGTAGTGCCACAAGGAGAGAGTCTCTATCTACTAGCTCTGACTTGTACAAAAGATCTAGTAGCAGCCTAGCACCCATAGGGCAACCATTTTACAATAGTCTGGGATTTTCCTCCTCTCCAAGTCCAATAGGCATGCCTCTGCCAAGCCAAACTCCAGGACATTCACTTACGCCACCGCCATCACTTTCATCACATGGATCCTCATCCAGTTTGCATTTAGGAGGACTGACAAATGGTAGTGGTCGATATATCTCTGCAGCACCTGGAGCAGAAGCAAAATACCGAAGTGCTTCAGGCACTTCCAGTCTATTTAGCTCCAGCAGCCAGCTCTTTCCTCCTTCTCGGCTTCGGTATAATAGGTCTGATATTATGCCTTCTGGCCGAAGTAGATTATTAGAAGATTTCAGAAACAACCGCTTCCCAAACCTTCAACTTAGAGACTTGATTGGACACATAGTTGAGTTTTCTCAAGACCAGCATGGTTCTAGATTCATACAGCAAAAGCTAGAGAGAGCTACTCCAGCTGAGCGACAGATGGTTTTTAATGAAATTCTACAAGCAGCCTATCAATTAATGACAGATGTTTTTGGCAACTATGTCATACAGAAATTTTTTGAGTTTGGGAGTTTGGATCAAAAATTAGCCCTAGCTACTCGTATTCGAGGTCATGTTCTACCCTTAGCATTGCAGATGTATGGCTGCCGTGTTATTCAGAAAGCATTAGAGTCTATTTCATCTGACCAGCAGAGTGAAATGGTAAAGGAGCTCGATGGTCATGTACTCAAATGTGTGAAAGATCAAAATGGAAACCATGTTGTACAAAAGTGTATTGAATGTGTTCAGCCACAGTCACTACAGTTCATCATTGATGCTTTCAAAGGACAAGTATTTGTACTTTCAACTCATCCTTATGGCTGCAGAGTAATCCAGCGCATTCTGGAGCATTGCACTGCAGAGCAGACCTTACCTATCTTAGAAGAACTCCACCAACATACGGAGCAGTTGGTACAGGATCAGTATGGCAATTACGTTATTCAGCATGTACTGGAACATGGTCGACCTGAAGACAAGAGCAAAATTGTTTCTGAAATCCGAGGAAAGGTCTTAGCCTTGAGTCAACACAAATTTGCCAGCAATGTAGTAGAAAAGTGTGTTACTCATGCCTCCCGTGCTGAGAGAGCTTTACTGATTGACGAAGTTTGCTGCCAGAATGATGGTCCTCACAGTGCCTTATACACCATGATGAAGGACCAGTATGCCAATTATGTCGTTCAGAAGATGATTGATATGGCTGAACCTGCTCAGAGAAAGATAATCATGCACAAGATTCGACCTCACATTTCTACTTTACGCAAATATACATATGGGAAGCATATACTGGCCAAGTTGGAAAAATATTATTTGAAAAATAGCCCAGATCTAGGGCCTATTGGAGGACCACCAAATGGAATGCTGTAAAGGAAAAAAAGAAGATAATGTAACCATGTGAGAGGAACGTTTCTTTTGTGAATTATCAAAACACAACTCAACTATGAATCTTCAAATTTTTTTTAAAGCAAAACTATTTATTGACTTTATTCATCCATTTGTAAATTTTTTAAGGTTCTTGTGTATATTTGGGGGTGGGGGTGGTGAATAAATTATATTCAGCCCTGAGTGGAGACCTATCAGATTGAATTGTGGGCAAAGCACAGAATGCCTGTATATGATGTAACTGTATCAAAAAATGCTGTCACATATTTTGTAAATTTTTACCTTGTAAAGTCACAAAAATAGTTTTTAAAGGGAAAAGTACAGTATTCTTTTAATAAACTGGCTTGCAGTCTGGTAGGTCTACGGACCCCACAGCACAACAGGTTTATAGAGATGTATATAAAAATATAGTCCTTATTTTTTTTTTGTCCTTTGTGTGAAGCCTTTTATAACAGATTAACAATCAACTGCATAAATTAGTATTTTAAAAAGAAAGTTAAGTTGTATTTTGGTAATTCACAAACTATCATGCAAATAAAAACTCAGTAAGATAAGAATTAAGTGATTTGAAAGGAAAAGAACTTAAGAGTATTTACAGTGGATATGGTTTTAATACAAATACTGCCCTAAAATGTCTCTGGCAATGTACAGAAGTATTGTATATACTTACATATGTAATTGTTATAAGAGGTAGAAAAAACAGAATCATGGTGACACTTCCATCCAGTTAAGTATGCTAAACGAAAAGTTAAGTTCCATTTTAACTTTTCAGTTTGGTTTGCGATGAGAAAGAGTGGAAATTTGTACATTGTTTTGCTTATAGAATTACAAGGACATGTTGAGAAATTGTTGAGCTTTATTTTGCTTTTTCATAGTAGATTCAGAAAGTAGGAACCTGATAGAGGTGAAAAGGGGCCACTGAAAAGTGAATTTGATAGCTCAACATTTAAGCATGATTACATATTCAGATAGCTTTTTTTGCTTCCTATAAATATATGCATTGTGTGTGTAGTAATAGATGTAAGTTTACACTTTGAAAGCAAATCTTGTTTCAATGTTTATTATAAAAGCCTTGCTAATTTGGTAGTGATGCTTTCTTTGGTTGTACAGGTGTATATTTGTAAACCTCAATGCTGTAAATGGAATTTGTTTTATCTCTTTGGGAAACATTTGCATTTTGGTGTACATTTATGTCCCTGCCCTCTGACCTGGCATATAGTGTTGTATAATGTAAATTGATTTCTCCAAATTGAGAGTGATTTTTTAAAATTTTTTATCTTTATATGGTTTCAGAAGTATGAACCAGCTTTCTTTTTATTATTGTGGAAAACATTTTGTTTTATAACATAGTTGTTGACTCTGTTAATATGGACATGCTAGGATTTGGGTCACTTTCAAGAAGTCAGGGTATTGTGCATAATAGAAAGTATTGGACTGAGATATTTGATGACCATGGAGGCCAATGCTTTTTCCATCTTATTAAATGTGATGTGACTTTTTTTCTTTGTACAGAAGAGTACTGTATTTTTGAATAGCCTACTCCCAAGTAATAGCAAATCTGTATGATAACATTTTTTCTCTGGACATAAGACATAACAGTAACATGATGTACATTTACAAGCGGCCTTATGTACATTTCCCAACAATCTTTTTAAGGCAAAATTGTGACCATATGTGTATAATTAAAATCGTTTTTAATCCTTTGCCTATGAAAATATTTTGGAAAAAACTTGCTTTGTATATTCAGTTTCTGAAAGATAAAGAAAGTGCTTTGTATTTTGTTGAAGTCAGTATTTTGTATAAAACTTTTATGTTGACCCACTTATGTTTAGTGCTAAAAACTAATGAACTATGCTATCTCTTTCAATTGAATATGTAAGGGATTTTTTTTATTGGAAGCCTGCAGAAGAATACCAGTCTTCTGAGCACAATAGTGAACATAAAGGTTTTTCACATAGCTGTTCATATCATGAACCTAAGAATAACAGCATGAAGTTTGGGGTGCCAGGCATAGTTTTTCATGTTTGATGTTGAGTTATTCTAGTTTTCTAACCCAACATTCCTTGTTGAGGCCATTAAATTTAACCACTTGTTCACTGTCCCTTCTCACAGTCACACTTGTTCATCAGCATGTCCCAGCCATAGTGACAGAGCTTTTTTCCCCTCCATACAGGGCTGCTCCCTGCCGCCCTTCCCGTTTTGTTTTGCCAGCCTCAGAATGTCTTGGCCCTGGGCTGAACTTTTGTTCCCAGTATCAGCTCATGGTTTCAGGATCAAAGTTGTCCTTGTTGGAGATTGGTGGTGACTTTCCTGGATTTGCACAGTTAAATTCCTGGTTTTCCTTTATCTTCTGTTCACACAGGCAAATTATTTCTGCAGATTTAGCAAGTCCTAGAGAACAGCACATTGGGAAACTGGACCATTGTCTTGGATTCCTGATGTTCTTGTGTGTCTCATTAACAGCCCAGTCTTCCCAGTATTTTAGGGCTTATCATAGAAAAATATCTATTACTCTAGAAATTTTGGTCTGCCATTTTTGATGCCCACCTCTCTGATTCCACCTTTTAATAAATTGGCATGAGGTTTTGGTATAATCTGAAAATGACATTTTAGAATAAACTTAATTGGGCAGAACCACTTAGGCTTTACTCTTGGTTGTCTTTTGATATGAATTGTTTCTGGACCAGTTTGTCTAAGTCCTGGCTCTTATTGGTTCATATGAAATAATGTTATCTTCACTTCTTTGTATATTATGTATAAATTAGAAAATGAAAAATGTGTGAATAACATTGTATGAAATAAATCTGGTCTTGTGTTTTTCTCTACATAAAATACCCCACTGTACCTCAATTACAATTCCCATTGACCATTCAAGTTTACTCTGATTTAAGGAAAACGAAAATACCTTTATCACATGGATGCTAGTCTGGGGCCAGTGATTGCACTGATGGTATGAATCCTGTCTTAAAATATTCATAATTTCTGTCTAACTACATAGAGTCATTACACACTTCATATGATGAAACTTTAACCCTGTTTCTTTATTGATAAAATGATACTTCAAAGTTGTTTTTGAGGATTAAATTAAATCACATATCTTTAC EMBV3_23913 AAGGCATCGAAGGTCCCTTTTCTCAATCGTGGCTCCGGCCTCTATGTCTGGATCAACTTG Gene GeneID:522802|ACCSL:XM_002693559:222_cdna Constitutive 2 NULL GeneID:522802 15 GENE ACCSL NULL 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like EMBV3_05917 CTCAGGATAGGGATGATCACAGGGGAGGTCTTAGAGTAATGGGGCCAAAATGTTAAACCT Gene GeneID:521039|CDH8:NM_001035339:282_cdna Constitutive 0 NULL GeneID:521039 18 GENE CDH8 NULL cadherin 8, type 2 EMBV3_03077 ACCAAGATAAGCCAATGACAGGGCCCAAATGTCTAAAACAGGTATAGCAGGCAGTTTACC Gene BVT0102_257072 - 1 EMBV3_20211 GK000012.2:80157133-80236589 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29352 CTGGCCACTATGTCCTTTGACCGCTATGTGGCTATCTGCAAACCCCTGCATTATGTAACC Gene GeneID:507560|LOC507560:XM_002687459:275_cdna Constitutive 0 NULL GeneID:507560 5 GENE LOC507560 NULL similar to olfactory receptor Olr920 EMBV3_40400 ACAACCCATTGCATGAAGCTGCAAAAAGAGATATAGTGGAAATGCTGTTTACTCAACCAA Variant GeneID:281961|OSTF1:NM_174409:29_cdna 384^491 3 EMBV3_19560 GeneID:281961 8 GENE OSTF1 MGC137137 osteoclast stimulating factor 1 EMBV3_34050 GTGAAGACATGTTCCCGCCCTTGTTGCCTCCCACTGAACAGGACCTTACCAAGCTTCTCT Gene GeneID:353105|STAT6:XM_002687570:610_cdna Constitutive 0 NULL GeneID:353105 5 GENE STAT6 NULL signal transducer and activator of transcription 6, interleukin-4 induced EMBV3_25107 CCTTTCCATCGGGCATGACTCTCCCAGTCCATTTGTGAGGAGGCTGCAGTTTTGGTGATT Gene BVT0102_108452 + 1 EMBV3_03812 GK000006.2:108758213-108804876 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15329 GCAAAGACCCTCTTGGCCACAAGAGCAAAGACAGAATATGCTAAGCCCTTCCAGGAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28786 GCAACAAGACTCTTTTAATATCAGCTGGAGGTTTTGGAATCAAAAACCTATCCAATCATG Gene GeneID:521728|ATP13A4:XM_002684859:240_cdna Constitutive 0 NULL GeneID:521728 1 GENE ATP13A4 NULL ATPase type 13A4 EMBV3_04781 GGCTAATGGGCAGTCCTGTGGCCTAAAGTAATATTCATGTGGTTGAATTAACAGTAACAT Gene GeneID:509437|RSRC1:NM_001075404:118_cdna Constitutive 1 NULL GeneID:509437 1 GENE RSRC1 NULL arginine/serine-rich coiled-coil 1 EMBV3_39802 GAACAGGTCATTGAGAATACTGGAGAGTTCTTCCGAGACCAAGGGAGGCAGACTTACCTC Gene GeneID:533523|DDR2:NM_001083720:311_cdna Constitutive 0 NULL GeneID:533523 3 GENE DDR2 MGC140218 discoidin domain receptor tyrosine kinase 2 EMBV3_10514 GCAGTTATCTGAATATTTTTGGTCAGAATTCTGAATTCTGTTTGATTCTTCATATTCCAG Gene GeneID:615287|YIPF4:XM_002691219:47_cdna Constitutive 2 NULL GeneID:615287 11 GENE YIPF4 NULL Yip1 domain family, member 4 EMBV3_00510 ACTTATCCGAAAAGCTAGAGAGGCACCATTTGTCCCCATTGGAATGGCAGGTTTTGCAGC Gene GeneID:100298628|LOC100298628:XM_002686800:157_cdna Constitutive 0 NULL GeneID:100298628 4 GENE LOC100298628 NULL similar to HIG1 domain family, member 1A EMBV3_23398 TTCCTTCATCTCACATTTATTGAGCATCTCTTATGTGCATATTAGGAGCTCAGTGTTTGC Gene GeneID:515608|PEX11A:NM_001075721:114_cdna Constitutive 1 NULL GeneID:515608 21 GENE PEX11A MGC140644 peroxisomal biogenesis factor 11A EMBV3_06932 TCTCATATGGCAATCCAGAGGCAATTAAGAAGTCATCCAGGTCAGGGAGGGCAGGTCTGT Gene GeneID:520448|KCNMB4:XM_002687380:25_cdna UTR3_Alt 2 NULL GeneID:520448 5 GENE KCNMB4 NULL potassium large conductance calcium-activated channel, subfamily M, beta member 4 EMBV3_34692 GCTGCAGAAGCAACCTACCTGGCATCAGAGTTTTTCCATCCTCTACTTACCTGGGCAAAG Gene BVV0102_248469 + 0 NULL GK000010.2:66755025-67009519 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017654 1 XLOC_009078 Coding TCONS_00017654 XLOC_009078 NonCoding Coding - 10:66840871-66976041 - TSS12023 587 1 TCONS_00017654_1 33 0.109028960817717 2 0.995672084575605 6.71935486799493e-05 0 1.11789835557327e-10 4.64271746080671e-18 1.65535720889862e-10 7.29484617373334e-05 3.97149274945624e-05 4.3202356869263e-24 0 0 0 0 3.11427907921411e-11 9.5118141948763e-12 0 8.93195064122284e-11 3.17170468555849e-14 0 3.08556178451549e-11 1.75528138449936e-24 0 1.9547802975224e-10 0.000307891650253969 3.2596142218024e-05 0 0.0005032489940878 0 4.48275328517173e-11 1.83416320469408e-11 0 XM_005211795.1 BMP4 PREDICTED: Bos taurus bone morphogenetic protein 4 (BMP4), 2e-115 419 100.00 0.393526405451448 0 noncoding 0 0 0 0 0.00293820978228734 0.979463809927349 -0.00672018823628741 0.901291771509447 GGGAAGGGTTCCGGGACTGTTACCCGTACCCGTGAGTAGGCTCCTCAGACGCTGGCCCAACAGTTCTGTGTGGTCAAGCATCGAGCTGACCTAATTAAAAGCTCATTACACCAGCACATCCCCATTAACAGGCAGACCCACGCGCAAATCCTTCAGAGCAGGAGCTCTTTCTGTTTCCCAGACCCGGGACCTGGAAGCTCTGGCCAGTTAAGGGATCTCCACGTCTGTGACCATCAGATCCTGAAGCTTATTGTTCCTGCTGCAGAAGCAACCTACCTGGCATCAGAGTTTTTCCATCCTCTACTTACCTGGGCAAAGAAGGAGCTTAGAGGATAAAGATTTAAGTGCTCCTGAAGGGCATGGGACTCAGGGCTCCCAGGTAAGGGTGGATCTGGTAGGGTTGTTGTCTTATAGAAGCATAAATAGCAGTCCTACAACTGACTTTTTCTCTGCTCTACTGCTTGTATTCCCATCATGTCAGGTGATCTAATAACCTATGATACCTTTTCTTCTTCAAGTCTAGGGTCTGATATTGCATTTGGCTCTCATGTCTCTTTAATTTTACTTAATCTGTAACAAAGAATGCT TCONS_00017652 s 5' 75538 TCONS_00017652 s 5' 75887 EMBV3_16648 CCATCAGGAAATATTCGAGTGGCAACTGGTGTCCCCAGAGGCAAATTTTAGACAAATCTT Variant GeneID:514024|IFT74:XM_002689495:28_cdna 360^495 1 EMBV3_18229 GeneID:514024 8 GENE IFT74 NULL intraflagellar transport 74 homolog (Chlamydomonas) EMBV3_12754 AGAAGTTCCAGACGAAACCAAAAGGAGACCAGGACACCAGCACCGAGGCTGATATGGACA Gene GeneID:100139722|LOC100139722:XR_084652:793_cdna Constitutive 0 NULL GeneID:100139722 25 PSEUDO LOC100139722 NULL similar to pentatricopeptide repeat domain 1 EMBV3_34630 CCATTACAGAAAGAAAGAAGCGTAGAAAAGCTTTATCCTGCCAAGAGGTCACTGACGAAG Variant GeneID:100140210|USP30:XM_002694539:489_cdna 339^521 3 EMBV3_36527 GeneID:100140210 17 GENE USP30 NULL ubiquitin specific peptidase 30 EMBV3_40751 AGGTGCTGTGTGGTATGGAAGAAAAAACTGATTCAAACACCGTTTCTCACATTTACCAGC Gene GeneID:509981|NIP7:XM_002694837:742_cdna Constitutive 1 NULL GeneID:509981 18 GENE NIP7 NULL nuclear import 7 homolog (S. cerevisiae) EMBV3_36434 CACACAAGCTTTCTGCACGTGATTGCCTTGGTCATCTTTCTACAGTAGCATCTGGACATC Gene GeneID:508383|GNPDA2:NM_001075356:14_cdna Constitutive 1 NULL GeneID:508383 6 GENE GNPDA2 NULL glucosamine-6-phosphate deaminase 2 EMBV3_30257 ATACACATTTTAAAGATATTTTTCTGAAAGAGAAATGATTTACTGAATCCTGATTTCTAA Gene GeneID:531455|ATG4C:NM_001082442:69_cdna Constitutive 2 NULL GeneID:531455 3 GENE ATG4C MGC148409 ATG4 autophagy related 4 homolog C (S. cerevisiae) EMBV3_36405 GGAAATCATCCAGAACCAGTATCTGCCACCTTGTAGGTGTTGCCTTAATTGTTGGGTTCC Gene BVT0102_018647 + 0 NULL GK000022.2:44279198-44304658 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05324 GAAAAGACTTAGCAGTTTCCCTTTGATTCATGATGCTCTCTAGCCAAGACTTTACTCTTG Gene GeneID:538402|LOC538402:XM_002690852:199_cdna Constitutive 1 NULL GeneID:538402 10 GENE LOC538402 NULL similar to Protein FAM81A EMBV3_26603 AGACGCTGACCGGAAAGGAGATTGAGATTGACATTGAACCCACGGACAAGGTGGAACGAA Gene GeneID:286796|NEDD8:NM_174764:50_cdna Constitutive 1 NULL GeneID:286796 10 GENE NEDD8 NULL neural precursor cell expressed, developmentally down-regulated 8 EMBV3_33244 CCTTACCTGGACCTCTTGTTGTGAGACAACTTATGCAAGTGGTTATCATCATGCCTAGCC Gene BVT0102_146633 + 1 EMBV3_22391 GK000002.2:52365185-52552245 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22631 AACTCCAAGGGGACCAATACCAGGGGGAACCCCATACTTGTGTGAGTTTATCTCCAAGAG Gene BVT0102_067462 + 0 NULL GK000006.2:68974141-69144343 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35144 TCAGAAAGGGAGGCAGCCGTGTCAGGACTTTGAGTTTAGCCCAGTGAGACCCTTGTCAAA Gene GeneID:522191|MTERF:XM_002686648:47_cdna Constitutive 0 NULL GeneID:522191 4 GENE MTERF NULL mitochondrial transcription termination factor EMBV3_33769 ACTGTGGACACACTCAGGTTAATTACAGACACACGAATTGTGCAGGAGTGCCGACTGAGG Gene BVT0102_126714 + 0 NULL GK000013.2:81604204-81852042 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046580 TCONS_00046584 TCONS_00046582 TCONS_00046585 TCONS_00046586 TCONS_00046581 TCONS_00046583 1 XLOC_026742 Coding TCONS_00046585 XLOC_026742 Coding Coding ZNF217 13:81849172-81885460 j TSS33770 6288 1 TCONS_00046585_3 972 0.0987595419847328 8 0.826935266073249 0.000441630095176983 0.000528495489187335 0.000724424033693476 0.000328611415420169 9.32578928694039e-28 8.12408906356098e-05 0.000153489224131506 0.000235700328235291 0.000281450993825141 0.000141248426547939 6.96104523331774e-05 3.44336296633454e-05 2.03534893096895e-05 2.57985397847583e-08 0.000168432860996711 0.000359742565900865 1.13917002408043e-12 0.000119744100143995 7.52241129583289e-17 6.65107526499081e-14 1.66323714058936e-08 3.721847896045e-07 0.00124419561758659 2.40078018679047e-08 0.000747752040603306 0.000373378540655479 0.00039554149596076 0.000158637442555146 1.52574669769263e-07 9.27453076152833e-09 XM_002692361.3 ZNF217 PREDICTED: Bos taurus zinc finger protein 217 (ZNF217), transcript 0.0 9660 98.82 0.866253180661578 NM_006526.2 ZNF217 Homo sapiens zinc finger protein 217 (ZNF217), mRNA. 0.0 1813 77.61 0.367684478371501 TCONS_00046585_3 sp|O75362|ZN217_HUMAN ZN217_HUMAN Zinc finger protein 217; 0.0 1275 63.55 0.998971193415638 3 coding 0 0 1 1 0.0322274449653333 0.836066489840556 -0.00415641582789007 0.939641404893365 CATTCAGGCTGACAGGCAGGCGGCAGGAGTAGGGAAGCGGGTTTTGGAAGTCCCTTGTCTCCAGGTTGCTGGAAGTGGCTTCTTGCTCAGCTGGATCAGCCACTCGGTGAAGACAGAACTCATGCTTTGTGCTGGCTCGGCTCTGCATCCACCACCGGGCAGTCTCTGTGCCTGGTCCTAGAGAGACCCAGCGATCGGTGTTGTGACTGAGCTTCCTGGACTTGTGAAGAGACGACGGTAGACGAATACACACTTTCTTTTGAATTTTTACAACAAATATTGGCTCTAGTTTTGAAGCCTCGGGCTGCTGGCTGTGAGACAGGAAACATGCCAACCCAATCCCTCTTGGTGTATATGGATGGACCGGAAGTGATCGGCAATTCCCTGGGCACCCAAATGGAGCTTGATGACGCCATGACGATCAAAGGGGCCGCCGCGGTCCCCTTCCGAGCGGCGCAGGAGAAGAGCATCACCCAGATGGAGGGGTGCATGCCCCTGGACTGCATGTTCTGCAGTCAGAGCTTCACGCGCTCCGAGGACCTCAGCAAGCACGTCCTCCTGCAGCACCGGCCCACCCTCTGTGAGCCTGCCGTCCTGCGCGTCGAGGCGGAGTATCTCAGCCCTCTGGATAAAGTCCAGGTGCGCAGCGAGCCTCCCAAGGACAAGAGCTGCAAGGAGAACGAAGAGCTGAGCTGTGAAGTGTGCGGGCAGACGTTCCGCGTGGCTTTCGACGTCGAGATCCACATGAAGAAACACAAGGACTCGTTCACGTACGGGTGTCACATGTGCGGCCGGCGGTTCAAGGAGCCCTGGTTTCTGAAGAATCACATGCGGACGCACACGGGCAAGTCGGGGGCGAAGAGCAGGCTGCAGCCCGGCCTGGAGAGCCCGGCGACCATCAACGAGGTGGTGCAGGAGCCCGCGGCCGAGGGCGTCTCCTCACCGTATAAGATATGCATGGTCTGCGGCTTTCTGTTTCCAAATAAAGAAAGTCTCATCGATCACCGGAAGATGCACACCAAAGAAGCTGCTTCCGGGCCCCGTGGCCCGCAGATCGAAGCCCCACAGGAAGGCATGCTGTCGCCGGGGGCGGAGCTGCTGCAGTTCCTGAATCTGAGACCCACGTCCCCCGCCGAGATCGCCAAGAAGCCGGCCAAGTGGATACCTCAGCTGGACCCGTTCACCACCTACCAGGCCTGGCAGCTGGCCACCAAGGGCAAGGTGGCTGTGTGCCGAGAGGTGAAGGAGCAGCAGCCGGGCCAGGAGGGCAGCACCGACAATGATGAGTCATGCTCCGACAAGGAGGAGACAAGTAAAAGCGGTTGCCCCGGCCTCTCCCAAGACAAGGAGAAGTCCAGACACCCCCATGGCGAAGTGCCTTCTGTGGACGCGGACCCCAAGTTGGCCAGTAGTAAGGACAAGCCGACGCACTGCGCCGAGTGTGGCAAAGCCTTCCGGACCTACCACCAGCTGGTGCTGCACTCGCGCGTGCACAAGAAGGAGCGCAGGCCCGACGCCGGCTCGCCCCCCACCGCCGCGGACGGCAGGCAGCCCAGGACGTGCTCCCCGGAGCTGCCGCCCGCCCTGGAGGACAGCGGGGCCCTGGACCGGGAGGCTGGCTCCGAAGACGGTTCCGAGGACGGGCTCCCGGACGGGCTGCACCTGGATAAAAATGATGATGGAGGGAAAATGAAGCATCTTACATCCTCAAGAGAATGTAGTTATTGTGGAAAGTTTTTCCGTTCAAATTATTACCTCAATATTCATCTCAGAACGCATACAGGTGAAAAGCCATACAAATGTGAATTCTGTGATTATGCTGCAGCGCAGAAGACCTCCTTGCGGTATCACCTGGAGAGACACCACAGGGACAAGCAGACGGACGCTGCCGCAGACGCCAAGAGCGACGGGAGGCCCCCGGAGGCCGAAGATGCACTGCTAACCGCCGACGGTGCGCAAACCAAAAATTTGAAAAGATGTTTCGACGGTGCCAAAGATGTTAAAGGCAGCCCACCCGCAAAGCAACTGAAGGGAATGGCCCCCGCCTCTCAGAGCGTCCTGGGCGGCGCCGTGCTCGCGCCAGTGCACAGGGAAACTCAGGATTTCAGCAAGGATGCAGCGGACGACGGTGCCGAGAAGCTGAGCAAGGCCCCCGGCCCCGCTTACTTGGACGCCTTGAAGAAGAGGCCGCCCGCGGACCCTCAGGCCAGCCCCCTGGTGTGCAGGACAGAGGCGGCCACGGCAGCCCGCCACGCGCAGCTCGGGCCCCGGGAGAAGCGGGCGGCGGACGCAGGCTGGCAGGAGAAGCCCCTGAACCTGTCCCTCGCCCCGCACGGGGGCGCGGGGGCGCCTCTGGGCAGGAGCGTGACCGCCAGCAGCACCTGCCCGTTGTGCACCTTCAAGACCTTCTACCCGGAGGTGCTGACCATGCACCAGCGGCTGGAGCACAAGTACCACCCTGACGCGCTCGAGAGCTGCCGGGGCAGGGCTGCGCTGCGCAGCCGGCGGACGGGCTGCCCGCCGGCCCTGCTGGGCAAGGACGTGCCCCCGCTGCCCGGCGCCTTCAGGCCCAAACCGCGGCCGGCCGCCCCGGAGCAGCCCAAGCCCGCGCCGGCCGAGCGGCCCGCGCCCGGCGCCCCGGGGCCCAGCAGAGCCCCGCCGCCCCCGCCGCCCGCGGGCGCCGACAGCACTTTAGCCCCCAGCAACCTCAAGGCGCTGCGCCCGCTGCCACCGCCCGGCCTCGGGGTTTCGGGGCCCGGGCCCGCCCGCACGCCGCCCGAAGCACCGCCCTGCAAGGCGGGCCCGGAGAAGGTGCGGCGGCCCGAGCCGCAGCCCCCCGCCGATGCCGCCAGGAGCGACGGCCCCTGGGTGCCCACCAGGGACTACGCGTGCGGCCGCGGCGGCGCTGAGCCGGGGGAGCCGCTGCCCAAGCGGCCGCGGGTCCCGCCTGAGCCGCCCTGTGCGCCGTGCCGCCGGCCGCCCGAGCTGCCGCAGTACCGCGTGGTGCGCGGGCTGGCGTCCCTGCTGCCGCCTGAGTGCGCCTGCGCGCCGCCCGCGCCCCCCGCGCGCCCGCGCCCCGCGCCCGGGCCCGCCTTCGCCGCGCTGCTACCCTGCGCGCCCGCCGCTGCGCTGGAAGGAAAAAGGCCTGTATCCTATCAACACTTATCTAGCAGCATGCTGCAAAAGAGGAACTATGAGAATTTTATTGGGAACGCACATTATCGACCAAATGACAAAAAAACTTGATTTCCTATTTTGGGAATGAAAGGTCTTGATGGATATAAATGTGTACTCTCCATGAAATTAAATTAGTTCATCCTTTGAAAAAGCAAATGTTGAAAGCTACTGAAATAAGCTGTGATTGTACTGTGTATATAACAGAGGAACACTACGGTTTTGTAAAGTGGTTAACTTTTGTACCAAATAGCAATAAAAACTACAGTTGCAAGATTTGGGTTGTGCACAAATGGAGACTGGACATCATCTCTATTTTGCCCCGAATAATACGATTTTTAGAATTGACCAAATAACAAATGGAGGGTTTTTTTTTTTTTTTTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGGGGGTGGGGTGGGGAGAAAGTCTATAACGCTTGCACCTCAGGTAAAAAATTTGTAAATACATGTTGTAAACCTGCTTGTTTAAATACTGTGTGTATTCTTTTCCTCTCATGTTGCTCATCACTTTGAGCTCTTTTCTGCTATTTGTCCTCTTTCATCTAAAATGTACGGTTTTTTTTTTTTAATTTCAATGATTTGTATTATGTTAAATCTTCCGCAGTCTATTGTCTTAATGGAATTGTTAACGGAAACATTGACCCTTTATGAATATGTGCTGCGTGTACCAAGATCAGCCTTTCTGTAGTTGGTACCCTTTTATTGCAAATTTTGGTAGGTCGTCTGAGGAAGACCCAGACCCATATAATCCTCTTCTCAGGGGATTGGTGGGGGGATTTTGAAGTGTGTTTATCTATAGAGAAGCATTTCCTCTAGGCCAGCCACACACTCAGTAAACACACCAAATTGCGGAGTGACTTAGTTTTCTACCCAGTGAATCGTTTTTGTTGGGAAATTCTGGCGTTTCCTGAATTATTTATATAAAAACACAAAGGCTAAATTACACATGTGAATTACATATATTGGAAGCAGTTTTTAAAAGAAATGAAAGTTGAGGGGTAAAGTTTAGGTTTGCCTCTGGTAGGCTTGGTGTGTCTGGCGCTTCGCTTGGGTTAACTGTGGACACACTCAGGTTAATTACAGACACACGAATTGTGCAGGAGTGCCGACTGAGGCTCCTGGTGCTCCGGGGACGTCACTGGTCTTGAGACCTTGGTTGTCTTCCCGTTTTTGGTGGTTTGGAGGCAGCACCATTTTCTCAGTGTACATGACAAGTTGGGTTTTAAAGAGAGACTAGCCACCAGCTGGCTTACTAAATGTTTTATTACACTTGTGTTCCCTTAATCCACTGTCCATGGCTGATTGTTTTCAGCAGTACCTAGGTTTAGTGACCACAACACACTTTATTAAGAAAACTGTTTCAGAAATAAATTTGCACTGTTAATTTTTTTTGCCTTGCCCTTCTCCATTAGAACAAGGGTAGCGTCCTCAAAGAATCCTGATTTTTTTGTTTGCTCTCATTATGCAACACGACGCTTGATAGAAAAGTCTTAACTCCCAGGTGGAAAGGGAGACCTCTCTGAGCTGACTCTGCTGGCATCGTGATGAAGTGCTTTGTATCAGGAAAGTGTACACTATTGACCTTTCTTTCTGTTCACAAGCTGAGCCATATGTACATAATCTAGAGTTTTGTTTTCCTAGTTTTGCACTTTTATAGCCTATTTTTGAAGATTAACACATTGACAAAGATGATTGACCTGATCCTTACCTAATCCAATGAGTGTTACAGAAAGCTTGCTGTGACGATAAATATAAATCTTAAAAGGGGATATACACGATGATAGAGGGCTGAAATTTAAATCTGTATTTAAAAAAAAATCACCAAATCTATTTGAAAACAAGTCAATTCATGTTATGCTGAAATCTGGGGGCCTTTCAGATTTCTCCTTTTTAACCACATTTCTGAACCCTTAAAAATACAGTTTTGTTTTCCTTTCCACAGCCCTTGTACTCCAGAATGTTGTGTTTTTTTCCTTTTTTTGTCCATCAGTATTAATTATTGGGATACTACTGGTTTTGTATGTTTTTTCCCTTTGAGACAACAGTACATATACTAGAGGTACAATCTGTTGGATTTTTGTTTATGTATTTATTTCATTCCAGTTTGATTTATTTTAATTGTTGATACTTAAGTTGTCAAACAGTAGACATTACTTGTTTTATTTATGATGTATTTCAGCTTGAAGTTATGTTATTATATGTGGATGTAAATATAGATTTGGTGTTTTGCAGTCTCGGGCTCTGGTCTTCATTGTGTCCCTGGTTGCTGACGTTAACTGTTTGTAAACATACACAGTGACAGAGAGATGCACGGACTGGATCCCCGTGGGCTCGCCAGCAGCACTTTGTCAGGCTCTCTGTGACTCCCCAGCCCTCCTTCCTTTTTAAAGCAAATCTTCAACATGTTTTAATTTCGTTCCTCAAATGCTTCAGCAAGTATCTGTAACGGATAAGGGCTTTTTCCGATCACATCTAACTAAACGGACAAGGATTTCTCATAACTGGTCTCCATTGCTGCATTTCCGGTGTCAGAAACGCCTTCTAAAGACTGTGAAGTTGCAGTCAGGATCCAAACAAGACCCACTCACTCAGATCCACTTCAGTCCTAACCTCCTCCCCCTAGACACCCACATGCACACTTGCTGCTGCTGCTAAGTCACTTCAGTCATGTCTGACTCTGTGCGATCCCATAGACGGCAGCCCACCAGGCTCCCTCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCATGTCTGATTCTCAGTGACCCCATGGACTGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGGTGCCATGCGTTTTATTTATTGAAGAAACTGGGTCATTTGTCCTGTAGAAATTCTCACTTCGTGTTTGGGTTTATTGGATCTTGCGGTTTCATCTAACCTGTTTTTCCATCCTCTGTATGTGGTCCTATAAGCGGGTAAATGGTCGGAGGTCTGGTTTTGAGCTCAGTTTGGGGAGAN EMBV3_39983 TGTCCTTACAGTCAGCGCCTCGAACAGCCGGTGTATGATGACGGTGTCCTTCACGATGCC Gene GeneID:100296661|LOC100296661:XM_002692573:256_cdna Constitutive 0 NULL GeneID:100296661 14 GENE LOC100296661 NULL hypothetical protein LOC100296661 EMBV3_20580 TATGTGAACGCGCTTTTTAGCAAATATACGGCGGGGGCTTCTCTGTTCCAAAATGCCGAG Gene GeneID:615851|HOXA7:XM_002686855:47_cdna Constitutive 0 NULL GeneID:615851 4 GENE HOXA7 NULL homeobox A7 EMBV3_36133 AACAAGTTCAATGTCCTCTATGACCGACAAGGCATTGGCAGGCGGATGCGGGGGCTCTTT Gene GeneID:512756|COPS6:NM_001101963:158_cdna Constitutive 1 NULL GeneID:512756 25 GENE COPS6 MGC159502 COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) EMBV3_07780 ATGGGCAACTATCTCAACGATGGACAGCCTCAAACCAACAAGACCACGGGCTTCAAGATC Gene GeneID:518088|GRID2IP:XM_002698152:593_cdna Constitutive 0 NULL GeneID:518088 25 GENE GRID2IP NULL glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein EMBV3_20274 GGCCTCTCACGTGGGTCCTTAAAAGCAAAGAAAGCGCAAAGCTTAACATTGTGGAGTCTG Gene GeneID:534137|SASH3:NM_001077998:11_cdna Constitutive 1 NULL GeneID:534137 X GENE SASH3 HXCXORF9 MGC142365 SAM and SH3 domain containing 3 EMBV3_11978 CAAGGATTCCCGGCGCGGAGCAAACATGAAAGCAGTAAAACAAAGCTCTTGCCCTATTCC Gene GeneID:539251|MGC157229:NM_001083742:242_cdna Constitutive 0 NULL GeneID:539251 2 GENE MGC157229 NULL hypothetical LOC539251 EMBV3_40469 AGCGCGTCAGGCGGAGGGAGCCGCCGCCAGGTGTGCAACAGAGGAACATGGCTCAAGAAA Variant GeneID:514167|ZFAND6:NM_001034460:33_cdna 169^329 1 EMBV3_13195 GeneID:514167 21 GENE ZFAND6 MGC127770 ZA20D3 zinc finger, AN1-type domain 6 EMBV3_37984 TCAGGACCAGAAGGAGCTTTATAAGATGCAGGCGGAGGGACTGCAGACACAGTACAAGGT Gene GeneID:523762|LOC523762:XM_002707794:16_cdna Constitutive 0 NULL GeneID:523762 29 GENE LOC523762 NULL similar to Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) EMBV3_17073 CCCCTGGCTCTCATCCTTCTCTCCTATGGCTTCATTGTCCGTGCAGTGTTCAGAATTCAG Gene GeneID:512138|LOC512138:XM_002689067:67_cdna Constitutive 0 NULL GeneID:512138 7 GENE LOC512138 NULL similar to olfactory receptor Olfr222 EMBV3_32223 CATCTTTCTGGTTAGAGACCCCACTCACCTGCTGAGAACCAGAGGAGCTGAGAATCCTGA Gene GeneID:530761|MKS1:XM_002695578:103_cdna Constitutive 1 NULL GeneID:530761 19 GENE MKS1 FLJ20345 Meckel syndrome, type 1 EMBV3_19865 GGTGCTGCCCTGGGCATCGTGTGGACCGGACCTCGAACAGAGTATTTATCACTTTTGTAT Gene GeneID:615967|PCGF3:NM_001046567:10_cdna Constitutive 0 NULL GeneID:615967 6 GENE PCGF3 MGC129075 polycomb group ring finger 3 EMBV3_12062 CGCAGAATCCATATTTACTAATCGCTGAGGCCAAACACCTGCGTGCCCACTCGCTTGCTT Gene GeneID:615530|CCDC92:NM_001101243:267_cdna Constitutive 0 NULL GeneID:615530 17 GENE CCDC92 NULL coiled-coil domain containing 92 EMBV3_06131 TCAGCTCCCGCTCGGCTCTATCACAAAAAGATTCAAGTGGATGAAAAGGGGAAGATCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13986 ATGTGGAAACAGATTCCTAGAGTAAATGGGTCAATATTTGGCCGCCAGGCACGCGAACCC Gene BVV0102_155002 + 1 EMBV3_06978 GK000024.2:39205395-39250141 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25403 TATGGGAGCATCAGCTATGTCTATCTCCAACCTTTGAACAGCTACACCGTCAAGGATCGG Gene GeneID:514342|LOC514342:XM_002691569:63_cdna Constitutive 0 NULL GeneID:514342 11 GENE LOC514342 NULL similar to olfactory receptor, family 1, subfamily L, member 1 EMBV3_00605 TCATGATTGAGTTCAGACTTTATACTGAAGCCATCTGTAAAGACATGGAGTTTTGAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11134 GAGCTGCAGTCTTATTCACCATCGGAAAGTTCACACAGGAGAAAGGCCGTATGAGTGCTG Gene GeneID:100298980|LOC100298980:XM_002695490:243_cdna Constitutive 0 NULL GeneID:100298980 18 GENE LOC100298980 NULL similar to zinc finger protein 264 EMBV3_08073 GCACCGCCAGCCTCATCGAGGACATCGACAGACTTAGAAAAGGAGAGTGACACACCTCTC Variant GeneID:535447|LSM1:NM_001017952:91_cdna 214^398 2 EMBV3_32246 GeneID:535447 27 GENE LSM1 MGC134081 LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_25978 CTGCCACCTCCTCATCCTCGAGAGTTTTCTGATCACTGTGCTGACACGAATATACTACCG Gene GeneID:516626|OSTA:NM_001025333:59_cdna Constitutive 0 NULL GeneID:516626 1 GENE OSTA MGC127207 OSTALPHA organic solute transporter alpha EMBV3_23453 ACACAGCGCAGATGATGGCTTTGTTACAGTGAGTTTAAAGCCGGACAGAGGGAAGAGGGC Gene GeneID:537817|TBC1D9:XM_002694365:151_cdna UTR3_Alt 2 NULL GeneID:537817 17 GENE TBC1D9 NULL TBC1 domain family, member 9 (with GRAM domain) EMBV3_41178 GTTAGCGTCACTGTCCTTACCCTCCCCTTCCTGCTGATCACCTTGTCCTATGTCTTCATC Gene GeneID:527077|LOC527077:XM_002693841:145_cdna Constitutive 0 NULL GeneID:527077 15 GENE LOC527077 NULL similar to olfactory receptor Olfr1418 EMBV3_03742 AGTGTTTCTGGCCTCCGCCTTCTTCCACGAGTACCTGGTGAGCATCCCCCTGCGCATGTT Gene GeneID:282609|DGAT1:NM_174693:12_cdna Constitutive 0 NULL GeneID:282609 14 GENE DGAT1 MGC139064 diacylglycerol O-acyltransferase homolog 1 (mouse) EMBV3_34884 GACAAGGGCCTTCAGGACTATTTGTCCACATGCAGCCTTCCTCTGAGTTCTACACCACAA Gene GeneID:617152|LMAN1L:XM_002696679:328_cdna Constitutive 0 NULL GeneID:617152 21 GENE LMAN1L NULL lectin, mannose-binding, 1 like EMBV3_12878 GGCACCTGCCTTGAGGTTGCCAGACCCAGGAAAAGCATTCCAACTTTATGTCCATGTAAG Gene BVT0102_109312 + 1 EMBV3_33018 GK000019.2:35876876-35933132 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00102424 TCONS_00162450 TCONS_00013240 TCONS_00013237 TCONS_00132043 TCONS_00243948 TCONS_00098385 TCONS_00098275 TCONS_00031871 TCONS_00099834 TCONS_00154811 TCONS_00185628 TCONS_00162451 TCONS_00105301 TCONS_00137852 TCONS_00178137 TCONS_00230483 TCONS_00029929 TCONS_00252175 TCONS_00243949 TCONS_00202431 TCONS_00056222 TCONS_00000314 TCONS_00207060 TCONS_00240487 TCONS_00132257 TCONS_00135546 TCONS_00010613 TCONS_00013239 TCONS_00169645 TCONS_00056481 TCONS_00187309 TCONS_00154809 TCONS_00164253 TCONS_00039773 TCONS_00107398 TCONS_00117782 TCONS_00154810 TCONS_00132044 TCONS_00013238 TCONS_00154253 TCONS_00102423 TCONS_00031828 TCONS_00202430 TCONS_00110376 TCONS_00252841 TCONS_00238548 TCONS_00140936 TCONS_00154812 39 XLOC_085141 XLOC_061863 XLOC_099332 XLOC_008038 XLOC_080693 XLOC_150314 XLOC_058631 XLOC_058521 XLOC_018116 XLOC_060077 XLOC_094549 XLOC_111681 XLOC_062534 XLOC_084061 XLOC_107910 XLOC_139973 XLOC_016184 XLOC_155116 XLOC_123974 XLOC_034025 XLOC_000088 XLOC_125579 XLOC_147151 XLOC_080738 XLOC_081769 XLOC_006164 XLOC_103408 XLOC_034284 XLOC_113357 XLOC_100173 XLOC_023590 XLOC_063308 XLOC_071948 XLOC_094013 XLOC_018073 XLOC_066280 XLOC_155782 XLOC_145215 XLOC_085365 Coding TCONS_00098385 XLOC_058631 NonCoding NonCoding - 19:5561093-5568721 - TSS72761 7628 6 TCONS_00098385_12 120 0.998820136339801 1 0 0.000472619384593992 0.000590112042379123 2.48698695252058e-05 6.19364967480683e-05 0.000262146668812916 8.23029148281041e-05 0.00017655106870438 0.000519719701354573 0.000316005689189621 0.00267620150743071 0.00246585130508771 0.00166543058682877 0.0010389308090448 0.001820917924053 0.00190811198114119 0.000274005677828412 4.6791762896366e-05 3.93696793448302e-05 0.000109342062985342 3.42928136903365e-05 7.04630609765089e-06 0.000202023784082533 0.000510413535597794 0.000290760511169636 0.000117659439792513 0.000218954540986896 0.000321718724345108 0.00197050180976411 0.00142749961532966 0.00144453398084447 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2349 88.75 0.234399580492921 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 9e-63 248 77.54 0.0431305715783954 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACTGGTCTATTGTATCATTTTAAGTTTGTGTTTTCTTGTTAATTTTCTGTTTAGTTGATCTATCCATAGGTGTGAGTAGGGTATTCAAGTCTTCCACTATTACTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATATTGCGGTGCTCCTGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGACCTTCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTTGTATGTGTCCCTTGTTTTGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCTTTGCCATTTACTTTATTGTTTTGGGTTCGAGTTTATACACCCTTTTTGTGTTTCCTGTCTAGAGAAGAGCCTTTAGCATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTAAAGCTTTTGACTTCTCCTTCATATTTGAATGAGATCTGTCATGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCGTGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGGAGAGAGAGAGAGTGAGAGAAAAGAGCGCACGCACGCGGGAGAGAGTCCGAGAGAAAGTGCTTTGGCTCCTCCTTTTATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAATGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTGTTCTACCTACCTAACATTCCCCCCTCAAGAGATGGGAGGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGGTGGCAAGGGATATTGGGCCTCCCCCTCTTTCTAGTCTCAAGCCTCAGAGTCCTTATAGCGGTGTCCAAGTGTGTGTGATATTTTCTGTGGTCAGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTAGTTGACCTGGGCAGAGACAAAACAAGTTAGACAATTGACAGTACATGGAATAATCATAAGCATCATCAATATAGCATAACAAGGACTAGTAGGGACATTCGTCAATTTTAAATTCACATTGCCAGGATAGCTCAAGTCCCTCCTTATTCAGGAATCAGAAGATCTATCTCCTGTCTGTCTTGGAGTACAGTCTCTGTCAAGCTGTGTTGGCTCCTTAGAGTTATCCTGAGAAATCTTATCCCCAGAAACCAGGTTTTGGGGGTGTTCATTAGAATGACATTCATTGGTAGTTCTGAATAGGTATCTGAGATCTCCCAGGGGCTCACAGGTGTATTGAGTGTCCTCTTCTGTTTTTTTCCATGGCTTGACTCGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCAGTAGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAGTTGAGCCTTTGGGGACCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCCTGGAGCATATAGTGGTGACTCTTTAGAATCTTTTGGGTCCTTGTTCATACCCCACAAGCGTATATCCTGTTGGAATTGCCCAATGGCCATGGTATAAGACTGGAGGGTCTGAATCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTCATAAGGACTAAGACCAATCTGTTCCTTAGGGGCAATGCGGGTGCAGAAGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATTGCTGATTTTAAGAATTGATTGGCTTTATACTTTTCCTGAAGATTGAGGCCTCCATGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACTCCTCGGGTGACCTTAGAAGTAAATGATGTCCCATTGTCATTTTGTAATGACCTGGGCAGCCTTAGCCTTCTCGGTCCGGGTGGGAAAGCCTTCAATCCATCCTGTGAATGTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGTATCTGGGTGAAGTTCATCTGCAAGTCCTCTCCTGGGTAGGCCCCACGTCGTTGGACGGGCTGGGCCAGCTGGGGTCTTCGAGCTCCTTGGGGGTTGTTTAATTGGCAAGTGCGACAAGAGGAGACAACCTGTCTTATAGTTGTTTGGAGGCCTGTTCCTCTGAAGGACCTTTCTAGTCATCTTTGGAGGGCTTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTTCAGGCAGAAAAAGGAGTCCCTCCTTTTGGAACCACCCCATATGATCTTCTCGAAAGCCCTCGCTGTTAGCTTTAAGAGTCTCACCTTCAGTATATGAAGGAGTTTCTGGCAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGCTGCTTGGTTCCCTCGTGCCACTTCCATGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGCAGATGGGCTGCCTCCAAGAGTCGAAGAATCTGATCACCATATTTGATTGGGGACCCTCGGGTGGTCAAGTGACCCCTTTCTTTCCAAACAGCCGCATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCATACCTGGCTCTTCTTTTTCCATCCAAGACAAAGCTGCTTCCATCAGTGTACCAGATTTCCTCAGGATTGGTCAGAGAATCTTCTGACAATCCCTCTTGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAAGAGTGAAATGGAAGAGAGCCCTCGGGGGTAGGGAGGAGGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGGATTTTCCATCAGCATTACATGATATCTGAGGGTTCTTTGATCAGACATCCATAAATGGCCTCTCCCATTTAGAAGTTGTTTTACTTGGTGGCTGGTAAAAATAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCTAAGGCAGGGGGGCCAACCTTGGGAAGTTGGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATCCCACTCCCAAGGTTATTCCCTCTCTTCCATGGACATAAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGAAGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCTTCTGCCTCCTTTTGAGGATTTCCCCACATCAGTGGGATTGAATCATCTTGTCCCTTTAAGCTTTCATATAAGGGCTGGGCAATTAGACCATAGTTGGGTATCCAGATTCTACAGTAACCAGTTAGCCCCAGGAAAGCTCGCAATTGTTTTCGAGTTGTGGGGGAGGGCAACTGGAGAATTCCTTGTACCCCATCAGAGGACAGCCTCCTGGACCCGTGTGTAATCTGAATTCCCAGGTAAGTGACCTTTGTCTCGACCATCTGTGCCTTAGTATGGGAGACTTTATATCCCCTTTCTGCCAAGAAGTTTAGAACCTGAATTACATGTTGTTGGGCGCTTTTCTCATCTGGAGAGCAGATTAGTAGGTCATCTACGTATTGTAATATTTTCCCATTAGGTCCCAGGTCCAGATCTAGGAAATCCCAGCTAAGGGCCTGTCCAAACAGGTGGGGGCTATCTCTGAACCCCTGAGGTAATACTGTCCAAGTCATCTGTTGGTGTTTTTCTCCTGGGGCCTCCCATTCAAAGGCAAAATGTTATTGGGATTCTTTAGCCAGTGGTATGCAAAAAATGCATCTTTGAGATCCAAGACAGTAAACCATTTGGCACTGGGTGGGATTTCTCCCAAGATTACATAGGGATTGGGTACTGTGGGATGGAGGGGGACTACAGCTTCATTTATAATCCGGAGATCTTGAACCATTCGCCAGGTTCCGTCTTTTTTCTTTACTGAGAGGATTGGGGTGTTACATGGTGAACTGGTAGGGACCAATAGCGCACAAGTAAGGACTTTATTTATTAAAGGCTGTAGTCCCTCCAGAGCCTCTCTTTTGAGAGGGTATTGTTTCCGGTTAGGAAACCGAGTGGGATCTCGGAGGACAATGATGACCGGTTCAGCTTGGTGGGCTCGCCCAGGAATCCCCTGGTCCCACACCTGGGGGTTAATTTTGTCTTCCCATAGTTTTTGGTCCCTCTCTATTGAAGGTGTAATGGGTTCTTCAGTAGTAACCAGGAGCTGTAGAGCTCTAGGGGCTGAAAAAGTTCCCATCACAAGGGTGGTACCCAGTTTAGTGAGTATATCTCTTCCCAATAAGGGGATAGGACACTCAGGGACCACCAGAAACTGGTGGGAAAATATTTATCCATCCCAGCAACAAAGAAGTGCTTGGGTGAATCTTTTAGTAGTTGCTTTTCCTGTAGAACCCAAAATGGTACAGGTTTGGGAGGAGAAGGCTCCGGAGTAGGAGATCAAGACAGAGTAGGTAGCCCCTGTGTCAGCCAAGAAATTCTCGGACCTACCTGCCACATCCAGTTGCACCCTTGGCTCCAGCCCCGTGATGGTCATCTGTGACAGGCGGGCTGGCTGGAGTAGGCCGCTTCAGTCCTCTTGAACCATAGTGAGGGAAGGCTTGGCACTTGACCTTGAGGCTCTTGGGTCCCGAGGGCAGAGTGCCACCTAATGTCCCAGTTGATGGCATTTGTGGCAAGCTGTTCTAGGAGACTTGTCACGGTTTGGACACTCTTTGGCCCAATGCCCCACCTGTCTACAGATCAGGCATCTATCTCGTGCCTTGTCTCTCAAGGACTCAGGGTTTGCCATAGGGCTTCTCTGGAGGGCGGCCAGCATCTGGGCATGCCTTGTCTCTTTCTTTCTCTCCTTCTCCTGGGCCTTGGCCTCCTTCTCCTGTTCCCTGTTATAAAAGGTATTGGTGGCTGTCTGGACCATCTCATCTAAAGAGGCAGCAGGGTCCTGCTGTTGTAGTTGCTGTAACTTAATTCTGATATTTGATGCACATTGGGACAGGAATTTGTCCTTTAAAATCACCCGTCCCTCTTAAGAGTCTAAGTCCAGGTTGGTAAACTTTTGGATGGCCTCTTTTAGCCTCTCCAGAAAGGCAATGGGGTTCTCACTGGGCTCCTGAGTTATTGCTGAGACTGGGCACAGTCCCACAAGTAGTAGGCTTTTTTTATGTTTCCATGGGTGGACTTCCTTAGGGAAGTCTTTCTAAAGCTTATCCTACCCAGAATGGTTGCAACCTGAGAGCCAGGCGTCCCTGGGTCAGGGTGCAGATCCCCAGGCAGGCTGAGGCATGACAGCCTCCTAGAGATCCAATCCCCGGGCAGGTTGAGGCGTGACGGCCTCCTGAGAATTGGGTCTCTGGGCAGGTTGAGGCGTGACAACCTCCTGGGACCCCTGGACTAGAGGATCCCCGAGCAGGTTGAGGCGTGACAACCTCTCAAAGACTGATCCCTAGGCAGGTCAAGGCGTGATGACCTCCTGGGACCCCCCGGACTGGAGTTTGGGCGTCCCCAAGATCTCCAGTGTGACCAATATTGGGTAGGATTAGGGGTTGGATATTATAGAGTATTTCCCTCCCAAGGCATGAAACAGGAGGGAAGGGGGCAGAGCACAAACTTTGAAAGAATGACATAAACCAATTAAAATCAATTGAGTCCAAGATGACAAGTCAACTTCAAGTAAACCTTAATCCCCAATCTATAAGCCAACAGACACACCCAGAGGTGGCAGGACAGCTCCAAGGCACAAGATCAGAAGAGGGAGAAGTGGGTGGTTCCCCAATGGCTGGGATGATCCTCTCACTCATTAGCATATGAATTCCATCCCCTCACAAAACCTAGCCAGGCCTAATACCATGGCCGCAGCCCTTGCCCTCAGCAATGGTTCACACCCTGAAGAGTGGCTTCTCTCTGGATCCTAACAAATCTACCTCTTATCGCTTTGTCTCTCAATGAATTTTTGCAATGAGACACCAGAGCCTGAATTTCACTAGTTTTGGCCGGGCTTGAGTCCCGGGAGAGAGCTGAAGGACAGGAGGAAAAAGCAGTGGGAAAAACATGCCAAGGAATCCCCTTCATAGCCCGCTGGAAAATTTGCTGAATATCTGACCGGTACTCACAGTTTCATTGGTCTAATCTTTGGCACAGAGAAGAGAAAGGACAGAAGAACCCCACCGGCTTGTGTAACAGCTACTGAGGCTCAGTAGATAGCGCCTTTGGGACATGCTGAGGAGCAGCCTCTCCCGAGTCCCTCAATTGTGCCCCTGCCGCCTGCCTGTTCGCAGGAGGTTCGAGGAAACAAGAAATGAGAGATTGTAAAGGTCCCTCCAGCCATAGGAGCGAGGACCTCTTACCTTAACCGGAGGTCTTCTGGAATCTGAGACTGGGCCACGTGAGCTTTCTGCTGAGTTCGTTTTTCGCTGTCCCGGTTTCCAGCACGATGGGCCTTCCCCTGCTCTGGGTTTCTTCGTCTTCTGCTTCTAGCGCGGGAACTTCGCTGAGTTGGGCTCCTGCTGTGCTTGGCCTCTTCCGCGAGGAGGTTGTTTCAGCCAGGTTAAATCCGAGTCACGGCACCATAGATGTCACGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCATGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAGAGGGAGAGAGAGAGAGAAAGAAAAGAGTGCACGCACGCGGGAGAGAGAGTCGAGAGAAAGCGCTTTGGCTCCTCCTTTTATATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTCAGCCAGGAGTGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCACCATTTTGGACTTCTTTCCCCTATTCTACCTACCTAACAGATCCTTGCTGGGTACAGTAGTCGGGGCTGTAGGTTATTTTCTTTCATCACTTCAAGTATGTCCTGCCATTCCCTCCTGGCCTGAAGAGTTTCTATTAAAAGATCAGCTGTTATCCTTATGG TCONS_00092057 . 3' 38382 TCONS_00092057 . 3' 46009 EMBV3_39185 TCCTTTATCCCGATCTCAGTGTGTGGAAAGGTATTCACAGTTTTATATGGAAGATAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28080 TGGTGGAGGCTCAGTAGCTGTAGGGTAGGTTTGCGCCAGTAGGTGAAAACACCTCATTAA Gene GeneID:520630|SLC45A4:XM_002692571:250_cdna Constitutive 2 NULL GeneID:520630 14 GENE SLC45A4 NULL solute carrier family 45, member 4 EMBV3_17241 AAGCATGTGAAGAAGTTCAGACCTGGGCCCTCTCTATTTTTAGCTGCTGGACAGAGGCCC Gene BVT0102_403108 - 1 EMBV3_14668 GK000013.2:28314600-28415155 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41747 AAGAATGAGAAGGAAGGGTCCTGGGCAGATGGTGGCAGTGGTGAGTTGGCACATACTTGT Gene GeneID:528891|FIGLA:XM_002691232:86_cdna Constitutive 0 NULL GeneID:528891 11 GENE FIGLA NULL folliculogenesis specific basic helix-loop-helix EMBV3_39867 GATCTTAGTTTCCCAAGCAGGGAATGAACCCAGGCCCTCAGCAGTAAAAATTTGGAGTCC Gene BVT0102_073302 - 0 NULL GK000025.2:347326-361739 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27434 CTTGTTATTTGCTGTTGGATAGCAGGTTGTCTGGTCATATTTCCACCAGCTTCCCTGGGC Gene GeneID:512580|LOC512580:XM_002687595:684_cdna Constitutive 0 NULL GeneID:512580 5 GENE LOC512580 NULL similar to olfactory receptor MOR114-1 EMBV3_20370 AATTAGGGCGCTTGCACATGGTGTACGTGTGACTGGGCTTGTGGTTGTTCTGTGTATGTG Gene BVV0102_079824 + 0 NULL GK000026.2:29342489-29688415 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23033 TGTTCATCAATGGACGAAACCTTGGGCGCTACTGGAATATTGGGCCTCAGGAAGCGCTTT Gene GeneID:522360|GLB1L3:XM_002693845:157_cdna Constitutive 0 NULL GeneID:522360 15 GENE GLB1L3 NULL galactosidase, beta 1-like 3 EMBV3_23262 AGCCATCACCAACCGTCTCCACCCACCTCCTCCTATTACTCCCTCTTAGTTGACCTCTAA Gene GeneID:360192|AURKB:NM_183084:451_cdna UTR3_Alt 2 NULL GeneID:360192 19 GENE AURKB MGC142782 STK12 aurora kinase B EMBV3_41109 CTAAAGGAAGATGTGAAATTGCTCTCCCATCTGCTCCAGGCTTTAGATTATGGGGCGCCC Gene GeneID:538772|DARS2:NM_001102222:172_cdna UTR3_Alt 3 NULL GeneID:538772 16 GENE DARS2 MGC157196 aspartyl-tRNA synthetase 2, mitochondrial EMBV3_25255 TTACACGTAAGAAGATGATGGAGTGGACTGGAGTAGGGGAGTGGAAGAGAGGAAGAGGTC Gene BVV0102_291030 + 1 EMBV3_05431 GK000010.2:21448396-21457271 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019860 1 XLOC_010539 NonCoding TCONS_00019860 XLOC_010539 NonCoding NonCoding - 10:21454709-21455382 - TSS13750 673 1 TCONS_00019860_1 69 0.184249628528975 1 0 0 0 0 0 0 0 0 0 0 0.000293455346549259 1.36058406804506e-05 0 0 0 0 0 0 0.000111846682888214 0 0 0 0 0.000354421432412339 0 0 0 0 0.000114177306535207 0 0 0 noncoding 0 0 0 0 0.0312997712242345 0.806666876425312 0.0462923497928621 0.429660619437755 TTGCAGTTTGAATTTTTTTTTTTTAATTCTACAAAAACATATTAACACATTGCTGAGACTCTTCCAGTGCTTTGGAAGAGATCTGTGCAAGAGAGGACTCTTAACTTCCTCCAGCTTCCTTAGCTATTGGGTAATTGTGTATCTGGTCAGTCCTGCTAATGTTACTGAGCCATGCAAAGCGGGAGGGAGTTTTCACTAAAGATTGAGGATGACGTGGTAGGTCCACATTCTTCAGCACTAGTTCCTGGAACTGCTTCGATGATCACTGACTTGCTAACTTCCTTCTCTGATAATGTCAAGTCTGGACCTCTTCCTCTCTTCCACTCCCCTACTCCAGTCCACTCCATCATCTTCTTACGTGTAAGGGTGAAACCAACATAAAAGAGGGAGTCTTCAGCCTGCTTTCCAGAACCAGGGCACAGGAATTTCTTTCCTTGGATGATTCTTCTCTTAAATCTTGGGTCTTTGACTCTTCTGCATACCCCTGACTTGGAAGTGTGTATCCTTCTGAGGCAAATGTGACTGAGTAGTCTACATTTCATAATTCCCAGCCCATGATCTGTGATGCCCAGAAGGACTGACTTAACCCCCCAGGAGCAGCCACTAAATTTTCACAGTTCCTGCCTGGCTTTCTAGCCAAACAAACTGAGTTCTTCCCACTCAATATCCAGCC TCONS_00013061 . 5' 1861 TCONS_00013061 . 5' 1861 EMBV3_04710 TTCCAGGGCATCCATGTCTACCTGAAAGAGAAGGAATACAGCGACTGTGCCTGGGAAATC Gene GeneID:781778|LOC781778:XM_002689517:139_cdna Constitutive 0 NULL GeneID:781778 8 GENE LOC781778 NULL similar to interferon-tau EMBV3_34173 GGTTCTGTGTGTCTGTCCCCAGGGTTCCTACATTGACTCCTTCATTCTTCTCTGATTCCC Gene BVV0102_113115 + 0 NULL GK000011.2:71349194-71403123 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17130 GCCTGCTCCTGCCACCAACACTCAAAATTACGCTACATACAGAGAAGGCTACAACGTGTA Gene GeneID:534626|GRIA3:XM_002699495:54_cdna UTR3_Alt 2 NULL GeneID:534626 X GENE GRIA3 NULL glutamate receptor, ionotrophic, AMPA 3 EMBV3_07269 CACCGGGGCCAGTTGAGATCGTGAGGCTATGAACCTCTCATTACATGACCACAGAACTTG Gene BVV0102_148294 - 1 EMBV3_08051 GK000001.2:57319748-57326874 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000708 TCONS_00000710 TCONS_00000709 TCONS_00000706 1 XLOC_000183 Coding TCONS_00000709 XLOC_000183 Coding Coding C1H3orf52 1:57279559-57321019 j TSS357 2053 1 TCONS_00000709_1 181 6 0.950625919583203 4.04622661592002e-15 4.76497444560844e-05 8.31082603999088e-05 1.16916351238709e-12 2.63192749867573e-11 1.44459770736891e-05 0.000395981285470032 1.73316770625537e-05 0.000241048740859084 0 0 0 2.79168303138627e-06 7.72863238338458e-06 6.6994969379305e-05 4.49604170779917e-05 4.04104972293445e-05 7.11755087979754e-20 0.000216689992626278 0.000777631730226815 0.00032234741245287 0.00112772943293308 0.000442382109908237 0.000802941102903818 2.36996822206948e-08 8.62921531244455e-05 5.49037082153094e-05 2.25393000305502e-10 0 0 XM_865244.5 C1H3orf52 PREDICTED: Bos taurus chromosome 1 open reading frame, human C3orf52 (C1H3orf52), transcript variant X2, mRNA. 0.0 962 100.00 0.259132976132489 NM_001171747.1 C3orf52 Homo sapiens chromosome 3 open reading frame 52 (C3orf52), 2e-134 484 71.70 0.497320993667803 TCONS_00000709_1 sp|Q5BVD1|TTMP_HUMAN TTMP_HUMAN TPA-induced transmembrane protein; 7e-68 210 65.16 0.850828729281768 0 coding 1 1 1 1 -0.0469071536483511 0.780456819472634 0.00923852619121253 0.890176543076685 ACTCTGCACCCGCGGGTGTATGCGTACTGCTTCCTGGCGGGCTGTTTAGTCCCCCTCTGCCGGTTCATGGAGGGGGCCAGTCCCCCATCTCCAGGAAATGAGCTGGAGCTCTCGGTGATCCAAGGGAGGCCAGAAGAGCAGACGCCTCTCAACGGAGCCGTCCAGGGCATCCTTTCTTCAGCCGAGGAGCCCTGCCCAGTCCAGGCTGACAAGGAAAGCCCTTGGAGCTCCTGTAATAAGAAGTTGATTGGAAAGTGCAAACTCTGGATGGTCCTTGCCTCTGTTTTCCTGAGTTTCATTCTAGTCATCATCATAAGCTTATGTCTAACTGGAGTAACTTATATCGATGAAGATGAAAATGAAATACTTGAATTGTCATCAAATGAAACATTCTTGGTCATGCTAAAGATTCCAGAGGAGTGTGTTTCTGAAGAGGAATTACCTGACATGCTTGAGAAGCGGGTTACACACGTGTACAGTGATTCACCAGCTCTGAACCGCTATTTCACTTCAGTTGAAGTCATGGACTTCAGGATTTCCATGATCAGAACATGGCTGGTTGTGAAACTCTGGGGCTTGATCCAGGATCCCTCTGCTCCTACGATAAGTTGAGCACGTCCGGAAGGCACAGCTGTGACGAATGATGAAGGTTGATCTATGTCTGACAGTAGCACTCTGCTGAACTTTGGGATGCGGAGAGTTCATTCCACTTTACAGAAGAGATCCTGAGAATTAACGTGGAAGGACTCAAAATGATGAGAGGCGTGGAGGCGGTCCTTTTTCTCCAGCTTCTGCACAGTTACAGAGTCTGCTTCAGTGTTTAACAAAACAGTACTCCAGCTCTGCCCAGCTGGGTCCGGACAGGGTGGTGTGGTGGGGCGGCTGGCAGACCTGCAGGGGGAGGTCCCTCCACCCACAATGGACATGCTCTTTTTAGGGCAAGGGGTTCTCTCAGGCAGGATCCCGCCAACCTGGGCTGGAGGAGAGAGAACAGGGAGAGGCCAAGTGAGGGAGAGTTCAGCCAGTCACTCTCCTCCCTCTCAACCCTACATTTGACCTACCTCCAGACAAGGCTGTGAGGAAAAGGCGTGCACTTTGTCAAAGGTAATTAACATTGTTCATGTCTACTTCCAAGACACGTTGACTTGTCACATCTCGGGAAACCAGCCTTGGCACATCACCCAATGTTACTGCATTATGTAGCACTACAGAAATGAGATGTGTGTTTCTTAATTATTTCCCTGCATAATTACTGTGTCTCCTGAACACCTCTTTTGGAGACACAGGTCCCTGTGAATTTTGAACACATGGCTCTTCATTTTGGATAGTTTGTCCATTTATATTTTCATCAGCTTCCATCAGACAATCGTTAAGACTGCTTACCATCTGCTAGAGGTAGTTCATGTTGACTTTTTGTTATCTGGGGTCACTAGCCTTCCTGTAGGACTCAGTGTCTTCAAGCACTGATTATGTATCTTATTGAAGATGGTTGTGAAATAGGAAGAACCACTCTCAGAACTAAACTGCTGGAAGTTTAATGCCAGATCCTTTGGCAGGTGAGGGTTGGGGGGAACAAGAGGGACTGTGTTGGTCGCCTACAGACATAGAATTACCTGTCAAGAGGGAACAGAGTGTCTTGTTAGGAAAATAACGTTGCTGGAAAATTTCCAGGCAAGTTCTGTGGTCATGTAATGAGAGGTTCATAGCCTCACGATCTCAACTGGCCCCGGTGGATGATGTCAGGGGAGGGCAGCTGTGTAAGGGGATGTGTCAGAGTGTGCATCTCAGGCTAGATTTGTCGAGCTCTTTAAGACCCAGGACTCTGGATAATGTGAATGTGCTTTGTTATTTAATTGGAAGATATGTTTATTGTAACTCGGTGTCTCATTTTGAGCATTGTTCCTCAAACTAGTGAAACAGGTGAATTTCCCTTCTTCCTCTTTATATTTTATATGTCAAACCTAAACTTTCATGTTTGTACTTTTAAGAAAATAATGAAGAACTTCTTTGGAGAGGATTTAAAATATTGACAATAAATTATTTTTTGCTGCCA EMBV3_33795 GACCATTACATATTGTCTGGCCTCACAGGTGGTTGGAAGCTGTGTATTGTGGGTGTTACC Gene GeneID:534677|GTDC1:NM_001076035:115_cdna UTR3_Alt 2 NULL GeneID:534677 2 GENE GTDC1 MGC143010 glycosyltransferase-like domain containing 1 EMBV3_06532 TCGCAGGAAAGGTTATAATCGGCTGGTGATCCTCATGTTGGCCAGAAAGTTGCAAAGCCG Gene GeneID:787783|LOC787783:NM_001145061:392_cdna Constitutive 0 NULL GeneID:787783 23 GENE LOC787783 NULL glycine N-acyltransferase-like protein 3 EMBV3_35909 CGCTGGAGCCTTCTGCTATGACGTTGTTTTGGATAAGAGACTTGATGAGTGGATGCCAAC Gene GeneID:515194|MRPL39:NM_001080730:19_cdna Constitutive 3 NULL GeneID:515194 1 GENE MRPL39 NULL mitochondrial ribosomal protein L39 EMBV3_21302 CTAATTACTCATCTCCATCTCCCTAACCTTCAATCCCAACCTCCCTTTCAATCTCCCATC Gene BVT0102_249762 - 1 EMBV3_12973 GK000012.2:32556402-32604815 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42928 GGATGAGTTCTGTGAACAAGTTTGGAAAAGGGACCGAAAACAGCGTAGGCAAAGGCCAGG Gene GeneID:537777|LOC537777:XM_002686736:21_cdna Constitutive 0 NULL GeneID:537777 4 GENE LOC537777 NULL similar to semaphorin III/collapsin-1 EMBV3_07092 AACTACACAGAATTCACACAGTTTCTTCAGGCAGCCGGAGGAAGTATCTCACACCAGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28151 CTTGGTACTTCCTCCACTAGATCCCATAGCAGCCTATCTCTCTGCATTTTCAACATGGAT Gene GeneID:535227|CYP2U1:NM_001076050:68_cdna UTR3_Alt 2 NULL GeneID:535227 6 GENE CYP2U1 MGC140497 cytochrome P450, family 2, subfamily U, polypeptide 1 EMBV3_40518 TCGTGGTACTTTCCAACGTGGCAGAGGGCGCTTTAACTTCAAAAAGTCAGGTAGCAGTCC Gene GeneID:540648|BCLAF1:NM_001098117:38_cdna Constitutive 0 NULL GeneID:540648 9 GENE BCLAF1 MGC139150 BCL2-associated transcription factor 1 EMBV3_01868 TGATTCAGCTGCAGGCAGGGTGTCTGGCTGAGCGGGTCACACCCATTGGTCTCTTTTCCA Gene BVV0102_341516 + 1 EMBV3_14448 GK000010.2:18992645-18999003 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019713 1 XLOC_010392 NonCoding TCONS_00019713 XLOC_010392 NonCoding NonCoding - 10:18993413-18995075 - TSS13603 1662 2 TCONS_00019713_1 74 0.142599277978339 1 0 0 0 0 0 0 0 0 0 4.74737744333501e-06 4.95125305611059e-06 4.13208878748364e-06 0 1.72640223683917e-05 0 0 0.000190697566567391 0 1.50968333525102e-05 0 0 0 0 2.7599487080943e-05 0.000302610811025707 0 0 0 0 0.000324224546202638 1.08524330579542e-05 XR_138623.2 LOC100847509 PREDICTED: Bos taurus uncharacterized LOC100847509 (LOC100847509), 4e-47 194 84.32 0.110709987966306 0 noncoding 0 0 0 0 0.0271224070605119 0.854747769902033 0.00859358643745808 0.870610111165266 GCATTTTCTGATTTCCTAGTGATCACAGCAGTTACCGACGAAGCAACTGTTAACTCTTGCCTTCTTTCAGGCAAATTTTGAGAGCAGATACAATGTTAAAAATCGTGAATACTATTAGGTTCTTTCCTTTTCCTGGAAAAGAGACCAATGGGTGTGACCCGCTCAGCCAGACACCCTGCCTGCAGCTGAATCACAGGCCTTCATTATGCTTTCCTGTTAGCTCAGATAAGCTGACAAAAAGTAACAACATTAAGATAAAATATTTTAATCTCTTCTATAAGCTGTTTCTGGTTCCCTCAGTTGCAGAGAGGGAATGAATGCTGCGTTATTGAGGTGGTAAGAGCTCATGAAGTTGCTGAGAGGGAAAAAAAAATCATGCTTTACCAGAGGGAATCAGATTCTTCTCTATCCAGAGAAAGAGGGTGGCTTAAGTGGCCATATTGGCCCATCAGCTAAAGATGAACAAAGTACAGGGTTGAACAACACTAAAGGGGCAATGTTGTGGCCAGTGCTGGACTATGTTGCATTTTAAAGATCTATATCTAGATATAGTCCTGTGATTGAAAAGCACATGTATTAAACTGGAGAGCTGATGGCAAACTATTGCACTTCGGTTACAGATTTTGGTCTTCCAACTGTTATAAAAATGCTGTCCATTAATAACCAACAAGGACCTACTGTATAGCACATGGAACTCTGCCCAATATTATGTGGCAGCCTGGATGGGAGGGAAGTTTGGGAGGGAATGAACAGATGTATATGTATGGCTGAGTCCCTTTGCTGTTCACCTAAAACTATCACAGCACTGTTAACTGGCTGTACCCCAATCCAAAATTAAAACTCTAATAGTTAAAAAATATATGTTAATGAAACTTTCACAGGAACCAACAGGTTATATTTTTGCTCATATTAGATGCATAGTGAAAATCTGTCAGTTTAAGGTGATTGTCATTACTGTGCTGAGAAGCAGCTTAGTATAGAAGCAAGCATGGGTTCCATCACATTTAGTTCCAATTCCACTCACTAGCCCTATAATCATATCTGTAATTTAGTGTAAGTCCAGTTCCTTAAAAGTAAACTGCAGACAATTCTAGCTCCATCTGGTGGGGTTTGATAGTTGATGTATGTGAACTATCAAAGTATAGCACAGGGCTCAACAGGCGTCCTCTTTGAGAACTCACTAGTTCTGGAGGTTTTTCCTTGTGACTAGTGCCAGAACATCTGTCTCAATCCAATTAACTAGGTTTGCCCTTCTCTGAGCCATCCTCCTGAAATGAACCTTTATTCCTCTGACCCAGCAACAAGTGACCCCAGAGCTACAGGAAACTGGGGAGGCTGAGGGGGGATACAGACCACCCCCTTAAGTTAGGCTCTGCTTCCTGCCGTTCCACTGTGCCCACGGGCTAGCAGGACAGGAGGAGGTGCTGCTAGGTTCACTGGACTGAGGTGTGAGTGAGGGTGTTGACTGCTGTTTGTTACCTGTTTGGATTTTTGGCCACAGAATCACAGAATCTGGAATTTAACTCTTGGTGGTCATTTGGACTCCCTTGCAAGGTATGTGTGTCAGCAAACAATCCCCGAACAAAACTTTGGAGCCTAAAGACAAGCTTTGGCCCTGGTGAAGAGGGTAAGGTTACAGGTTTTACCATTAAGTGACCTCTT TCONS_00016200 TCONS_00016201 TCONS_00016202 TCONS_00016203 TCONS_00016204 TCONS_00016205 TCONS_00016206 . 5' 770 TCONS_00016200 TCONS_00016201 TCONS_00016202 TCONS_00016203 TCONS_00016204 TCONS_00016205 TCONS_00016206 . 5' 770 EMBV3_10989 GCTGTTCACGATGACTGTGGTTCTGTATGACTGTGTTTCTATCACCCCTCTGCTTCTAGC Gene BVV0102_158550 + 1 EMBV3_29415 GK000010.2:30367053-30432599 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020312 1 XLOC_010989 Coding TCONS_00020312 XLOC_010989 Coding Coding - 10:30425279-30429486 - TSS14202 4207 2 TCONS_00020312_2 142 0.363679581649632 1 0 0.000155234895149308 0.00032961345847518 0.000131979957579088 0.000343456343169681 0.000346201535369669 4.76146846438322e-05 0.000113667693523797 0.000278372826727586 0.000161291141962578 0 1.36034358842491e-05 0 2.04607560915542e-06 6.26156105817387e-05 4.19831645535363e-05 0.000244842160656586 2.95975965243473e-05 0.00247509655751243 0.000116475851510986 0.000430768601785536 3.03067596175358e-05 3.88055989618687e-05 0.000340183154241849 0.000816913584237208 0.000270365934539639 0.000472265885213533 0.000110024384830036 0.000155253209064678 1.38471990525599e-05 0.000134336368197567 XM_003584303.2 TBC1D8B PREDICTED: Bos taurus TBC1 domain family, member 8B (with GRAM domain) (TBC1D8B), mRNA. 5e-31 141 69.92 0.0827192773948182 NM_145702.1 TIGD1 Homo sapiens tigger transposable element derived 1 (TIGD1), mRNA. 1e-20 107 80.17 0.0285238887568338 0 coding 0 0 0 0 0.0369725387219043 0.870959579234563 -0.0105622854855462 0.863286058805866 CTTCTTTTATGGATTTTCAATTGGGAGACTGGAATCGACATAAATATATATACTATCTATAAAACAGATAACTAAAGAGTGGCCAATATCTTGAAGAATATAGCTAAGGGAGAATACACAACCAGACGTCAAGATTTAATATAGAGCTGCAGTAATTAAACCAGTGAAATGCTGGCACCAAAAAAGAAAAATAGAACAATGAAACTATTTCAGAAACAGACCCACAGATACACAATTATTTGATTTGTGACAAAGGCTACAGAACAGTGCACTGAAGATACTACTTTTTTATGGATCCTACTTTTTAACAATTGAAGGTTTGTGGCAACCTGGCATCCATTAGTGTCACTTCTCCAACAGCATTTGCTCACTTTGTGTCTCTGTGCTACATTTTAGTAATTGTTATAATACTTCATACTGTTTTCATTATTGTTATATTTATTATGGTGATCTGTGATCCTGCATGTTATTACTACAAAAAGATTATGACTCGCTAAATGTTAAGATGATGGTTAGAGATTTTTTTTGTAATATTAAACGAAGGTGTGTACATCTTTTTAGACATAATGCTATTTAGCATACTTAATAGACTACATTTTAGTGTAAACAACTTTTATATGTACTAGGGAGCTGAAATATTGTGACTCATTTTATTGTAATATTCAATTTATTGTAGTGGTCTGGAACACACACAGAGTATCTCTGAGGTATGCCTATAATAGTAATTCAAAGTGCAGGTCTTGGTACATTCTAACTTTTCCCTTATCATTTACTACAGTCTTTCAAAATTGCTATTTAACCTCTTTTGGCTTTGCTTAAAAATAAAAAATAGCTTTAGGATAATTAACTAGCATTTTGACAATTAAACATTACTTACTACAGTCCCTTCACATTATATGTTTCTCATACTCTTTTCAATCCAAAAGAAATATTAATTTGGCTTTCACCCTTAAGTATAAACACTGTAAACATCAAAGCGTATCTTTTTTTATAGACCTCTTATTCTCTATCCTGATTCTGGCAACCTAGTCTTCTCTTTGGTATTCTAAGCCTGGGAGGAATTCTTTTTTTTTTTTCTGGCCACACTGCACAGCTTGTGGGATCTCAGCTCCCTGACCCGGCATTGAACTCTGGGACCGTGGCAGTGAAAATGTGGAGTCTTACCCCCTGGACCACCAGGGAATTCCCGCGAGAGGAACTCTTTGGTAGGTTTGCCTTACTCATCTGTGAGGTGAGGGATCTGCCTGCTTATCAGATGGTGGTTCTCGTCCCAGTTAAACTAACCATCGTGTCCGAGGCAAACCAGCCAATGCCTCGGTGCTTCTCCTCTATGAACTATGGCATTGTTGCCTGTCACACAGGAGAGACTCAGTCTAGGAATAGTCAAGAATTAGACCGTTTCAAAGATATCTTCCAACAGTTTATTATGTATAACTTAATTCACTTCTGTGACAAGCAGTCAACCAGCAAAGTAAAATGTAAATTAACCTCGTCTATTCTTGTTCCACTACTGTTTCTGGGGAAGTCTGGGGTTAGAAGAAACCAGCACTGGGAAGTGCTGCTAGAAGCAGAGGGGTGATAGAAACACAGTCATACAGAACCACAGTCATCGTGAACAGCTGAACTAAAAGCCAGAAGAAAACTCCCCTCAAAGTGAATGAATGCCTGGAGAAGAAAAAGATAATATTTTATATGACCACCTTCTACCAGGAACTCTTGACTTTTTTAAAAAAAAGGTTGATAAAATCAGTTTCTCAAAATAGCTATTCATATTAAACCAGGCATCTCCCAAGGAGAAACAGCTACCATTGAAGTTCTTGCCCTTAGATTTACTGTGAGATGAGGTCTCAGGTGAATGTACCAAGTTAAGTCAAAGATGGAGAGAAAGAGAGAAGTGGGCAGTCATCTCTGGAGATCAACTAAGAGAGAATTCAACATGTCTGATGCAAGGTAAGTTTTGGGGTCTTCTCTCTTACATTTTTCTGAAAGGAAATTTTTTCATGTTTTATATTTGTCTAAATTTTCTTCTATTATTTCTGGTGCACCCCCGTTGCCCATGTTAAATCCTCTCCCTTTTTGAAACAAACTTTTAAAGAAAACACACATTTAGAGAACTGAGAAAACAACACACATTGGAAATACATAGACTGTTCTTTTACTGCAGAGTAAAAAAAATGAGAAAAAGTTGGTGTGAAATCTTGGAGCCTAAAATTAAAATGTAAACAGAAAATGCTCAGTGACCTTTTCTTCGAAGGCTCACATGAACAAATGTCATGGTACACTGATCAAATTTTTACTCATTTGCATTTTCAGGATGTTGCTATTAATACCACATGACACTCAACAAATTACACTATGACATTTTGTACAAATCACTTCACCTCTAGATTCTTCTGCTGTTACTTGAGCCTCTGGTTACTTGTGGAAAAACAATGTATTAAAGTCTTATTTTTGTAGGGGAGACAAAACTTTTCCTCTGCCTTCTTAGGTCTGTAACTGGGGCCTATGAATTAAGTTGATAAAAGACAAATTGATAGGAGAAACGGCATATAAATTTAATTGATGTTTTTTAACTTTACTTCCATGGAGTTGCACAGAAAAGAAGTAAAAATTCCACCCAGACTATTAGGCTTCTAAGCTTATATACTATTTTAACAAAAGATAATAAATTATGGAAAAGTAAATAAGGCAAAAAAAGGAGTTTGAGTTTTTAGGGGTTGTAAATTGTGGGAAAGTAAATATATGGGGAAATTAATGGAAGATAAGGGTGAGTTATTTTAGTAAGGTTTATGCAGACTCATTTCAGCATCATCTCTGTGTGTAGTAATAAGGGGTGTTTTCTTCCTAGTTCAGGAGAGAGGGGACATCTTTACAAAGGGAAATTCATGCCCTGCTTTCAGGCAGAAGCAAAAGGACTGAGAAAACTTCCTGTATCTGCGTCTTCTCAACTGCCTTCAGCTCAAAATATTCCTTTTGCCAAAGCAGCATTTTTGGGGCTTGTATATTCTTACCCCCCTAATTTTCTAAGGAGGAATCAAAGTTCATTTGCTAATGTAAAAATATCAAACCTCAGAACCAGTTCCCTGGAATGTCTTAATTTAAAGAAGAAAAAGAAAGAGTTCCAATGTCAAATAAGTTTGAGAAATGCTAGATTAAATAAAGTTAACTTGATTTTTTTCCAGCAGTAAATAACCTTTCATTAACTAACAATGCACTATTAGTCTACAAATGGGGAATAATAATTAATTATGTTCCTCAAACTTATTTGACCATGGAACGTGTTTTTTTCCAAGTATTCTTTCAGATGAATGGTTTTTGTAACATATGTTGAGAAATACTGGGATCAGCCATCTGTATATGTAAGTGCAAAAGTTTAAGTAGGCAGTGATGTTAAATGGAAACAAAAAGGCAGAGCCAGCAATAAAGCTGTCAGTCTGCACAGCAACTGTGCTGCATTCTGAGTCATGCTCCAGAAGGCTGAGCTGGGGTTTGTCTCTATGAAGGAAGACAAGAATGTCCAAAGCTTTTGGATACTTCTGAATTAGAACCCTTTCTTGGGCACTGAAGAGTAGCAATGGATAAAGAAAAAACAGTCTCACATGCTCATTTCCATTACTGGCTCAGTACAGCTCCAGTTGTTATCATTCTTAAACATCTATTAACATGACTGCTTCATAATTACAAAGGCTAACAGCCAAGCATTTTTCACAGGAAGCAAAGCACTGCCTGTTTTTAAGAGCTTTTCTGACGTGTGCAAAAAGGTCGTTTTTTTTTTTTTTTTTTTCAATCTGTTTAATCTTATTTTAATTGAAGAAACATCTCTAAAACACTATATGAGTGACTGCAAGATGAAAAGGAAAAAGCATATTCAAGCTAGATAAGTGCAATAATATAGATGATCTTGAGGTGGGTGATACAGGATACAGAACTGATGTTATCAGTACATCCCAAGCACAATGATACCTAGCGTCTTCATCTGCCAGATATTTTAATTTCAGCAGAGACCTTCCTCAATGTTGTTATGGGCTGATTTCAAGGTTCTGAATCAGTAAATTTGACCCTTGATCTCAAATGTCAACTGCCGCCACGTTTGGCCTTCTTCGTCGTCCTCCATACTCCCTGGGTGGGGGCATAGCTAAGTGCTCGAGTCAGAGAATTATTTGGTAATAAAAGATTTGGAGGAAAATGGAGGGCGGGGGTGGGGTGG TCONS_00016653 TCONS_00016652 . 3' 3112 TCONS_00016653 TCONS_00016652 . 3' 7318 EMBV3_26614 CCAGAACATTATCCCTGCTTCTACTGGAGCTGCCAAGGCCATGTGAAAGGTCATCCCTGA Gene GeneID:617654|LOC617654:XR_083674:20_cdna Constitutive 0 NULL GeneID:617654 5 PSEUDO LOC617654 NULL similar to Glyceraldehyde-3-phosphate dehydrogenase EMBV3_35765 ATAGAAGTGGTCATTGGGCAACCAGAGGCTGCAGGACAATGGACAACAGAGACGACAGCA Gene GeneID:787836|LOC787836:XM_002688687:136_cdna Constitutive 0 NULL GeneID:787836 7 GENE LOC787836 NULL similar to EGF-like module-containing mucin-like hormone receptor-like 2 precursor (EGF-like module EMR2) (CD312 antigen) EMBV3_03578 TCACAACAATCATAAGGTTTTTTTCCTTATTCTCCTTTTCAAAGATCTTATACGTGAGGC Gene GeneID:100138748|THOC1:XM_002697732:211_cdna Constitutive 3 NULL GeneID:100138748 24 GENE THOC1 NULL THO complex 1 EMBV3_33208 GCCCAGGAGAGTGTGTTGACTTGGAATATGTGTTTTTTGTTTTCAGTTCTGCTCTGGGTC Gene GeneID:516781|NAB1:NM_001102039:27_cdna UTR3_Alt 2 NULL GeneID:516781 2 GENE NAB1 MGC166379 NGFI-A binding protein 1 (EGR1 binding protein 1) EMBV3_06120 GGGCGAGAGGTTGGGCATCAAGCCCGAGAGCCCTGGCACAAAAACTGTTTCCGATGTGCT Variant GeneID:539381|CSRP2:NM_001038183:11_cdna 283^412 2 EMBV3_19104 GeneID:539381 5 GENE CSRP2 MGC133755 cysteine and glycine-rich protein 2 EMBV3_01232 TTCTTCAATACATCAACATGGATGAGCCATAGGGCCTGCTGTCCACATCTCTTCCCTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39411 GATGATACCTGGAGAAAGTGGTCCAGACAGGATGCCCTGAGAAAACAGTGTAGTTGGAGC Gene BVV0101_013328 + 0 NULL GK000016.2:70161313-70439073 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23838 CCCCTTTTTTATGTTGGTTAATAGAACACAGAGATGTTTAGGAAAATGCTTGCTGATGAG Gene GeneID:540947|SS18:NM_001098122:13_cdna Constitutive 2 NULL GeneID:540947 24 GENE SS18 MGC138909 synovial sarcoma translocation, chromosome 18 EMBV3_07699 TCTGCCCGGCTCTGCCTGGAGGTGCCGCCCATTGATCGTGTTCTGTGTTGAAGATGTTTC Variant GeneID:508836|SNX10:NM_001075375:127_cdna 76^121 3 EMBV3_03473 GeneID:508836 4 GENE SNX10 MGC139527 sorting nexin 10 EMBV3_28767 CTCTTGGTTGACTTCTCTGCCTTCGTTTCCCTGTGAGCTGGTCTCCGTAAGTTCTGTACC Gene GeneID:100336936|LOC100336936:XR_083701:46_cdna Constitutive 0 NULL GeneID:100336936 6 PSEUDO LOC100336936 NULL CDP-diacylglycerol synthase 1-like EMBV3_09407 GCTCTTCGAGGGCGAGAAGAAGATCACCATTAACAAGGACACCAAAGTACCCAATGCCTG Gene GeneID:540428|POLR2J:NM_001037483:278_cdna Constitutive 0 NULL GeneID:540428 25 GENE POLR2J MGC133490 POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa EMBV3_00538 CTCACTTCTCAGTGCATCACACCCACTGGAATAAAACATATGGCACCGTTACACTTTCAC Gene BVV0102_081055 + 0 NULL GK000010.2:4391821-4409110 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015708 TCONS_00015712 TCONS_00015711 TCONS_00015706 TCONS_00015709 TCONS_00015710 TCONS_00015714 TCONS_00015713 TCONS_00015707 1 XLOC_008540 Coding TCONS_00015708 XLOC_008540 Coding Coding TMED7 10:4403000-4418690 j TSS11036 7022 1 TCONS_00015708_2 136 0.164767872401025 3 0.552616482886099 2.34729017040833e-40 2.2773352179875e-50 4.15682276318645e-06 2.38502388558175e-127 1.85248053631559e-129 2.6136667383027e-108 4.08618455790335e-20 3.39861233435225e-48 2.35652062550629e-08 1.59176841239687e-10 3.29965140520944e-09 1.79154501441586e-09 1.29700611711046e-06 7.35628455487926e-09 6.1269720386895e-37 0.00308574493948954 0.00210642349641141 0.00385442050740994 1.91612502480525e-10 8.23082112873661e-42 1.52005496176939e-87 0.0019107025307923 0.00143679300012643 0.00288345169173701 2.37918090431245e-106 8.3835021833219e-73 2.25147144790563e-114 0.000359055518591914 0.000256143446607275 0.000573103576336171 XM_005211176.1 TMED7 PREDICTED: Bos taurus transmembrane emp24 protein transport domain containing 7 (TMED7), transcript variant X1, mRNA. 0.0 5887 99.97 0.465109655368841 NM_181836.5 TMED7 Homo sapiens transmembrane emp24 protein transport domain containing 7 (TMED7), mRNA. 0.0 3009 78.85 0.504841925377385 TCONS_00015708_2 sp|Q9Y3B3|TMED7_HUMAN TMED7_HUMAN Transmembrane emp24 domain-containing protein 7; 7e-96 280 99.26 0.992647058823529 1 coding 1 1 1 1 1.10539042736657 0.0700735418201214 -0.0673748248092853 0.305674049227156 GCTTCCACGTTATTACTGGTGGTCACTATGATGTAGATTGTCGACTAGAAGATCCTGATGGTAATGTGCTGTACAAGGAGATGAAGAAACAGTATGATAGTTACACCTTCACAGCCTCCAAAAACGGGACATACAAGTTTTGCTTTAGCAATGAATTTTCTACTTTCACACATAAAACTGTATATTTTGATTTTCAAGTTGGAGAAGACCCACCTTTGTTTCCTAGTGAGAACCGAGTCAGTGCTCTTACCCAGATGGAATCTGCCTGTGTTTCAATTCATGAAGCTCTGAAATCTGTCATTGACTATCAGACTCACTTCCGATTGAGAGAAGCTCAAGGCCGAAGCAGAGCTGAGGATCTAAATACAAGAGTGGCCTACTGGTCAGTAGGAGAAGCCCTCATTCTCCTGGTGGTTAGCATAGGGCAGGTATTTCTTTTGAAAAGCTTCTTCTCCGATAAAAGAACCACAACAACTCGTGTTGGATCGTAATTTGAGAATTGATGCACCATTGCCGCTGTAATATTGCTGTCCTCCAATTAATTTTAGGTACCGAAGAACTTAATATGGCAACATTTTTAGAACCTTACTCATACACTTGTTGGGGGTGGGTGTACAATGCATATCCCAAGCTGTGGAAAGGACACCTTTTTTTATTTGTAAAGGTAGAAAAACTTTGGGACTTATTTTGGGCTATTCATAAATATTCAACACAATGATTTACACTTTTCTGGGTTGTTTCTATCTACTCACACGCTAACCTTTGGTAATTTTGATTCCTCTTATCCTTTTAAAAGTACTTTTCTTGTAAGCAGTGGATATTTTAAACGAAGCCTTCAATTTAATGTTAATGTGGAGGAAGAAAATTACCTTTTAGTTGTTTATAGTAAATAAAGTTTTGTTTTTAAGAAAACCAAATGTGATTAACTGTAGCCCAAGCCCTATTCCTGCATTGTTTAATTTTATGAGGAAAAAAAATCTACCATAGAAATATTAGTTAATATTGATATAATTTTAAATTGACACATCATGGTTTAATTTATTTCTCAGTAGCTTGGAAAATGTCATTTTTGTTGTTTGGGTTTATTCTATGATCTACCACCAGATATGTTATTTTTTTTTTTTTCATAAAGACAGGAACTAGTGTGTTTCAGTAACAGAGTTTACAGACACCTTAAAAATCAGACTGTTGTTAACAGGTAGAATAATCACAGAGTAATTTAAGACACTACAATGGGGAGCAAATGACATGAGAAAACTTTCAGTGAGTTATCAGCACACATTACATTTTCAGTGCTTTTACAAAGAAAAAAGGTGATCTGTTTCATTAAACATTGAATTGGCTAATTCTTGCTCTAATGTGGCTTTAATGTCGGGAGTCACTCCTAGCTTTAATTGACAGTTGTTAATATAAAAGTGAAAGTGTAACGGTGCCATATGTTTTATTCCAGTGGGTGTGATGCACTGAGAAGTGAGTTTCTTTGGGTTTTTTCTTTCTTTTTCTTCTTTGTTTTTTGGGGGTTTTTTTGTTTGTTTTTTGTCTTGCACATACAATTTGTACAATCCCTGATATAGCAGCCCTAAGATGATTTAAAAATTTAGAATGCTGTGTGTGTTTCTTATTTGATAATCTTCATTGATTGTACTGCATTTAATGAGTATTAAATAGTGCATTTTCTGTACACTATAGGATTTAGTCTGTGTTTGTATTTTATAATTTGCATAAATTGAGCTGACTGAAATAAGATTTTGTTCCAGGTATTCTAGGATACAATACAAGATGATGCAAAATTGTGTTTAAAGCTCTTACGCTGTTTAAAAAAAAAAATTACGACTGCTTTTTGCCATGTTTCTCTCCCCCACCTAAAAGTAATGAGTACTGAACATGACTGGCATATTTTTAGGGCTTTGGTATGTGGTACTACAGAATACTGATTGGACAGCAATTTTAGTCACTTAACCTCCACCAACTAAAAGTTAGCTCCTAATTCTAAGTTGTCTTAAAATGCACATACACTTGTGCATGTAAAAGCAAGATGAATTCAGGTTGTCCTGCTTGCTAATTTAAAATGCTAGAGTGTAGCAAAGGATGAACATACTTTAGACCCTTTAATTCTAAAATGTTTGAAGACCAAATAGCTACTCCTTCAACAATATTTATCAATGGATTAAGAACTGAAGTTTAAGATTGAACGGATTTCTCTTTTTTGGGATCCTGTCCTGCAGCTTTTTAAGTGTCCCTCTGTATTTAGATTTGCAGGTTTTAAACAGTACTGTTAAAGTGATAAACCTGAGAGTATGCTGAGTGTCCTTTTCAGGTTGCCTGCCTGCTCTTGTGTTCAGGTAATTACACCATAATTAAGCAGAGTTGGGTATCATCAAACTGCCAAATTTGGCATAGATAATAGTTATTTAATCTGTACCTATCTAAACTTCATGATATTTAAAGACTATTACCACAGATAACTTGTGATAAAACTATTGAGGTATATTAAAAAGTTTTAAATCACCACTGTTACCTGTTGCAGAAAATAGTACTGACTTAGTCTAGTCTGTAACTGGTTAAAGTTCGGTGGCTTGTCAATATTCAACTAGGTATGTATATAAAAATTAGAAAATACATATCTACCTGGATATGAATATTAAGTAGAACTTTTCCTTCTATATAATTTGTAGCTCATCTTTCATCTTTAATCCTTTCATAACTTGTTGCTGCAGTTTGAATTTCTCAGATGTTTATATTTGGACACACGGCTCAGAATACTTATTTAAACATCATTAGCTGTATATATTTTTAAAGCAGAATAAATACTGGAAAGGGACTTGATATGCAAGTTTATACTAAAATTCCAACTGTGTGAAGATAACATTTAAAGATATTACTTTGCTAATAATCTAAACATTCTTTTTATTAAAGAAGCAGATGGTCTGGGGTTCACAGCTTTCATCCTGGCTTGATGATAATCAACTTTGAAAACACAGTGGACTGGAAAGCAATTAAAATTGCTTTAAGTTCTTTTAAAGATTTCCTTTAAATCTCTACTATCCAGTTTTGCTTCAGTTTGTAAATGTGTAACATTTATGGTTAAATAGGACAAAGCAGACCCTATTGACTATTGTTTTCAAAAATTAAACAAATTGATATATAAATTATTTAGAGGGCATTTTCATTTACTTTTGGAAAGAAAAATTTGTCTAAATGACACATGCTGGTTCTGCAGGATTGTACCAATCAATTCTTGTAGAATAAAAAAAAAATCTTTCAACAAACTGACTTCACTTATTTCTGTCAAGATTTAAGTCTTTTTAAAGCTCCTTACCAACTTAGGCCTTGGGGTGCAGTTTTGTAGCAAGAGAGTGATAATTTATTTCATATTTTATTGGAACATCTTAGGGACTAAGTTAAAGAAGAGGAATACAACCTCTAATCACCTCACTTTTTAACCTTTTTGGTTTTCTTACTGAAAGTTGGGGGGAAAGGAAGTTTAGCCTTCAATTCCCTAAAAAGCTTCTTAGTTTTTAGGTAAGGTAACATTTGGTTGTATAATATTATTTTCTCAATGTTGTTCCCCCTTTATAATGTCATGGGGGACACTCTGGCTCCTAGGCACAAGTCTACAAAAGTAGCAGGTAAGTAACAGCAATACAGGTTAACCATCAGTATTTTACTTGTGTTGACCCATTGCATCTTTGCAATAATCCTCTGAAGTAAGGATATTATTCCCATTTTACAGATGAGGAAATGGAGGTTAAGAAACCTGCCTGTATATCAGTAATTAGCAAAATACATGAGCCATGGCACTGTGGTTCCAGACCCCTCTTTCTCAACCACAATGTGGTAGTACCTACAATTACCATTAAAGAGTGGATCTCTGAAGGCTTAGCAGTATACCTCAGAAGTGGTTCAGTGCTTTGGTTTTGGAGTTATAGCCAAGATCAGATCATGATTGGGTGATCTCATGCAAATGATCTTGTTAACTCCATATATTTCTGTTTCTTCATTTGTTATTAAGGTTATTTCTACTACAATGAGAACATAATGAGATTTATTATAAAGCACTTAGGCTCCACGCCTGTCATATACAAGTGTTTAATAAATAATAGCTGTGTTTTTGTCATTGGTCCAATTTAATCTCTTGATCCTTCTTTAGTTCTTAAAGTTCTTACTGTAACCAAGCTCATACGGCTCTTAAATAATATGTAACAAATACAGAAGTCCATCATGTACATAATAATCTGCTAAGAGTTTCAAAAATGAGTAAGATAATCTGACCTCCAGGAACATAACAGTTGGGGGAGATGAGATAGCTATATAAGGAACTAATGTTAACTAAGTCATGAAGCAGAAAGAACTTGGTTTCTAAGATACCTACAGGGTGCTAAAGGAGCAAGAAAATACACAGATCAAAAGACTTACTCCTCATGGCATTTTGCTTTGTCCTCTTCCAGAGTCGGGAGGGAACATGGTTTAGCTGGGCCAGCAGTTGAGTGAACCAATCTCTACATCAGGGATGTCTATTTATTGGTACAGATCAAAAAATATGTTGTTACTAGTAAAGGTGATCTCCTGAATAACCTCCATCTTGGTTGTTTCCAAATTCTGGAGGAAAATAAAGGGATGTTATCCTTAAACCACAATATGTGCTATTTTTCAGTCTACATTTCTCCATTTTATCCACAAGCTAGCATTATTAGGATGTTTGGTGAAATCTGGAAATAACACAGGGTCTGGCATGATCTGTTTTTAGTGCTGTAATTACTAGTGACTATTACTACCTTGTGGCTCAGCTGGTAAAGAATCCGCCTGCAATGTGGGAGACCTGGGTTCGATGCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCAAGAAAATGCCATGGTCTGTAAAGTCCATGAGGTCGCAAAGAGTTGGACATGACTGAGCGACTTTCACTCACTCACTCATTCACTACTACCTTAAAAAGAGAAGGGAACACAGGAATTTCAGAAATTGTGGTTCACAGAGTAAAACTGACCAGTAATCTGCCATCCACTTTGATGCACTTCATTTGAGAAATTGTGGTTCAGAGAGTAAAATTGACCAGTAATCCACCATCCACTTTGATGTATTTCATTTGAGAAATGTATTTCAGTTTTTGTACAGATTAATGTATATATTTTTAAAGAATTGGTGTTGTCTGTAACAAAGTTTTAAAACTTTTAAAAATTGTAAACAGGGTATTAAACATGTACAGCTTAAAGAGAAATAAAATTATAAAGCACATTCTCAATAACCCATGCTCAGATTAAGAAATGTAGTATTGCCAACACCATAAAAGGTTCTGTGTACCCTTTCCTGACTATTTCTTCATTAGCGATAACCAGTGTTTCGCTTGTAATGAAAATATTTTTTTTTCTTTTTACTAGTTAAGTATGCTTGTTCTTCTCAAACTTTTAAAAAAATTTCCAAGTAATCACAAACAGTTTTTTATTAGTAAATACAAAATCATGTGTTTGAATATTTTGTTAATATTAAATTGCTGTCAGCCTGCCTGAATGCTTGCTTTCTGTGCATGCTTACTCATGTGCTTCTCTCCTCAGCCAGTAACAGTTCAGTGTGGTCACTGGACCATACTTTGAATAGTACTTATGTCTACATTCCTGAAAAATGTCTAAAAAATCAGGCAAAAGTAAACATTAATAAATAAAGTTTAATGGAATATTAAATTCTATTTAATAAATTAGATGTTACATATATTCCTTTGTGACTTTGTTTAGCAAAGTCATCCGTGTTAATGCATATAGCTGTAGTTTCATTACTGTGTAGTAGTCCATCATATAAATATACTAAAGTTACGGTCTTTTCTTCTGTGATGGCATTTGAATTGTTCTTAGATTTTTGCTGTTCTAAAGCCACTATGAACATTTTTGTATATTATGTCCTGTTTGCACATACATATCATCCCTTGAGAATACCAGGGCTTCCCTCGTAGCTCAGCTGGTAAAGAATCCACCTGCAATGCAGGAGACCCCAGTTCGATCCTTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCACTCTTCTGGCCTGGAGAATTCCATGGACTACACAGTCCATGGGGTCACAAAGAGTTGGACAGGACTAAGGGACTTTCTTGAGGATACATCTACGAGTGGAATGTTTGCTTAAATCTAACTTTTTAAAGCAATAGTATCAATTAGTGCTTTTACCAGTAACAGTGGAAAGTTCCACGTTTGTGCTGTTAGACTTTTAAAACTTTACAAAGTCTCCTGGGTTTGTAATGCTGTTAAAGCAACACTTAAGAATTTGAGAGGAGCTTCCCTGGCGGTCCAGTGGCTGAGACTCCATGCTCCAAACGCAGGGGGCCTGGCCTGGGTTCAGTCCCTGGTCAGGAAACTAGATCCCACATGCTGCAACTAGGACCCGGTGCAGCCAAAGAAAGAAAGAATTTGAGAAGTGACTCGAGGAATAAGACCCACCCAGAAGTCTGTTATCCATTTTCATGTTTTTCAGTTATTTTTCTAGATATATGTATATATTTTTAAAGAAACTGCTGTCAAACCTCATTGTTGCTTCATACTTCTATGAGGTTATTTTTTTCCTCACAGGTTTGTCTGCCACATGGATTTCCTCTTCGTGAAGTCCTTGTTCAGATATTTTGCCCATTTAAAAAAACTGAATGTCTTGATTAACGGGATTCCTTTATATATTCAGGAGATTAATCTTTTGGTTATAACTACTTCAAAAAACTTATCACAGTTTGTATTTATCTTTCTGCTTCTAATGAAATACACCAGTCTTTTCCCATCTTGTTGGTGTTTTAATGTGTTGTTAAATACCTCTCTATCCTGAGGTCATGAGTGTCTTCTGTACTATGTTCTAACGTATGATCGTTTTGTCTTCTGCTTGGATTGAATTTTGTGTTTGGGATAAGGTAGGTGTACAGGTTCGTTCCCACACCCCTTAAAAACTCATCTCTCTGTTGA EMBV3_27214 CCGCGAAGACAGTACCGTTTCCTCAGCGGCGGACCGCTGCAGTAAGAATGTCTTTCCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16095 CAGAATCTCTTAGGGCTGAGAAGCCAGAGGTGTCTGATAGATGGGCTGTAGCTGTGGAGT Gene GeneID:531398|OGDHL:XM_002698971:127_cdna Constitutive 0 NULL GeneID:531398 28 GENE OGDHL NULL oxoglutarate dehydrogenase-like EMBV3_30749 CGACAAGAAGAGGAGGCCCCTCACCCTGGCCTCTGGACCTGTGTTCCTCTGTGGCCAGGA Variant GeneID:100316905|LOC100316905:XM_002689763:22_cdna 342^422 9 EMBV3_31976 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_21161 GGAGGGTGGGTCACCTCCATCTTCTGGATGGTATGGAGGGGTTGCTGCAGAAGGATTAAA Gene GeneID:539407|OGFOD2:XM_002694478:320_cdna Constitutive 1 NULL GeneID:539407 17 GENE OGFOD2 NULL 2-oxoglutarate and iron-dependent oxygenase domain containing 2 EMBV3_30814 AGATCTCCGACTACCAGTCCTTCTCCCTGATAGTGCAAACCTCCTTGCTCTGTGTGGTCA Gene GeneID:516849|LOC516849:XM_002689696:146_cdna Constitutive 0 NULL GeneID:516849 8 GENE LOC516849 NULL similar to testis flippase EMBV3_04886 ATCGACTGTAAAGTGCGGAAGAAATGTTGGTTTTGAATTATTACCAGGAGGTGGAGCCTC Gene BVV0101_015909 + 0 NULL GK000008.2:64731271-64994642 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13546 TGTATCATGGTATAGGAGTTGTGGGAAGCAGAGTAACTGAGGCGAGGACTGATACTAGGA Gene BVV0102_073778 + 0 NULL GK000003.2:22646402-22676254 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169132 TCONS_00169137 TCONS_00169135 TCONS_00169133 TCONS_00169134 1 XLOC_103285 Coding TCONS_00169132 XLOC_103285 Coding Coding PRKAB2 3:22633643-22650880 j TSS126707 5386 1 TCONS_00169132_4 272 8 0.687978649338594 2.69198057320335e-51 7.73674661588578e-13 6.29479329505532e-07 7.14170921453688e-05 0.000195436852016816 1.61368635914205e-05 1.97346039425984e-10 2.10506469842376e-11 0.000114997804201645 0.0011383045144057 0.000762121904768925 0.000239464214361024 9.52639197114572e-05 2.97894252682454e-06 1.26832375014987e-05 0.00529401190582202 6.73961348961343e-15 0.00461144477041694 3.6547644075593e-11 1.93941840750607e-09 2.08126327185687e-12 3.9042923178375e-07 4.16453912569591e-05 2.31362281291248e-06 1.29457616729488e-68 2.01610317057663e-05 9.54650254272846e-06 0.000693258106526594 5.46022798804631e-07 0.00108474813221478 XM_005203986.1 PRKAB2 PREDICTED: Bos taurus protein kinase, AMP-activated, beta 2 non-catalytic subunit (PRKAB2), transcript variant X1, mRNA. 0.0 9602 100.00 0.988303007797995 NM_005399.4 PRKAB2 Homo sapiens protein kinase, AMP-activated, beta 2 non-catalytic subunit (PRKAB2), transcript variant 1, mRNA. 0.0 4527 79.05 0.989045673969551 TCONS_00169132_4 sp|O43741|AAKB2_HUMAN AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2; 0.0 560 98.90 0.996323529411765 1 coding 0 0 0 0 0.551680027548701 0.295588375092484 -0.025459251665103 0.624209384081521 GAGAAGAAATCAACGCAGCTCCTCCCGGTACGGTGCACCAGAGCCCAGGAAGGGACCCCAGGTGGCCCCCGACTCGAGCTGCACAGCCATGGGAAACACCACCAGCGATCGAGTGGCCGGGGAGCGCCACGGCGCCAAGGCTGCGCGCGCCGAGGGCGCCGGCGGCCATGCTCCGGGTAAGGAACATAAGATCATGGTGGGGAGCACCGACGACCCCAGCGTCTTCAGCCTGCCGGACTCCAAGCTCCCTGGGGACAAAGAGTTTGTATCATGGCAGCAGGATTTGGAGGACTCCGTAAAGCCCACACAGCAGGCCCGGCCCACTGTTATCCGCTGGTCTGAAGGAGGCAAGGAGGTCTTCATCTCTGGGTCCTTCAACAATTGGAGCACCAAGATTCCACTGATTAAGAGCCATAATGACTTTGTTGCCATCCTGGACCTCCCTGAGGGAGAGCACCAGTACAAGTTTTTTGTGGATGGACAGTGGGTTCATGATCCATCAGAGCCTGTGGTTACCAGTCAGCTTGGCACAATTAACAATTTGATCCATGTCAAGAAATCTGATTTTGAGGTGTTTGATGCTTTAAAGCTAGATTCAATGGAAAGCTCAGAGACATCTTGTCGAGACCTTTCCAGCTCACCCCCAGGGCCTTATGGTCAAGAAATGTATGTGTTTCGATCAGAGGAGAGATTTAAATCTCCACCCATCCTGCCTCCTCACCTTCTCCAAGTTATTCTTAACAAGGACACTAACATATCTTGTGACCCAGCCTTGCTCCCCGAGCCCAATCATGTTATGCTGAACCATCTCTATGCATTGTCCATTAAGGACAGTGTGATGGTCCTTAGTGCAACCCATCGCTACAAGAAGAAGTATGTCACTACTCTTCTGTACAAGCCCATCTGAGGGATCCCTTCCTGCCTCCCAGGATTCAGGAGAAGCATCTCCCTTGCCTTTCTGGACTGGACCAGTCTTAGCTGGGACTGGAAGGCTGATTTGCTTTGAGGCTAATATGTGTGTTTCAGTGCCTGAGTAGGATGCTCTGCTTTTGCATTTGATTGCAGATGAGAGCTTTATGAGTTTATGGAATTTATTTTAACACTATATATATATATATATACATATGAAGGGAAAGTTAATGGAAGCCTCCTAGCTAGATGTATTCTCCCTGCCTATGGGAACTCACCAAGACCTGTTTGGGAAAGCTTCAGGAAGAGCCATTACAGGAATCTTTTTTCCTAAAGTGAATGAAGAACAAACTCTCAGGATCCTTGTTGGGTGGAGATTCTATCACTGCTACTACCTTGGCTCTCCAAGGAATGGACTTGTGCCAGACTGCTGCCCTACTTACAGCTGCCTCCTTGCAGGAGCAGCTTTTCTTGCATGGGTTCTCTGTATTCCCAGAGAATGTGGCACAATCTGTGCTTTTTTAAATGATACCAGATGCCCCATAAGAACCCTTTTCCCTTTCATTTCACATTCTTGCTTTGTTAGCCTCCTTCAAATCCTATACCTGACCCTTCCTAGCACAGAACTTAGTAGGTAAGTGACCCATTTCAAAGGCTTTGTGAGACCTGACCCACCTCACAGACTAGGGCTGCCAGAATGTCTCCTTTTTAAGCCAGCACAGGCCCATGACACTTTGTTACCACTTACCTTAACTTCTACTGAAGAAACTGGCTTCCTATGATATGAAAGGCAGAATGCAGAAGGTCTGTTTTCTTGTTTTGGTTTGGTGCCACAGTTAAGGCTGTATTGGCACATTCCCATACTTTTTCCCACCTGGTTTGGCCCTGCTTCCATGTTTTCTTTCACAGACAGCTTTGAAGGTAAGAGTAAAACTAGTAAAAACCTTCATGTCTTTTGTCCTTGGAAGATTTTTATGTGCCTACATTTTTCTTTTCTCCAAAAAATGCCTTTTCATTGCTCTAAAGAGACTGCTTTTGGAGAACTTAAGCTTTCGATAAATAGCTCACTATTTTCTTTAGCCCTCTACAATCGTACATTAATGAGGCTGACTCTGTGTACATCATTACAGTAAACACTGTTCTAGATACAGGCCCGTTCAGGCTCATCTTGTGCACCTAAAAGTTTCCTTCAACTTAAAGATTCATTACGCCAAGAAGCAAGACATTACCTTTGGTAGTCTCAGCGATGACAAATATTGCTTTCATGTGCTAAATGCTAACAGTCATCTTGCTCTTCTGTATCTTTTCCCAAAAAGTGTTTGATGATGAAGAGGGGTCAGTGATTTCCATTTGTGGAGTAAAAAGTTTCTATTCAATCCACTCTTGAGATTCAGAGATAAGATATTTTCCCCTAAGTTTCTGTGGCTCTTGCATTACAAATAAATGCAAGCCAAACATTCAGTACCGAAGGAGGCCAGATTTGATGCTTGAGAGGCTCCTTGAGATGAGCCCAGTCCCACTGAAAGGGCACCCACATGTCAATTAGCTACCTCCTCTCTTTCCCATGTAAAGCTGATGACATAGTTGTCTTTGGGTATGTAGAACTCTTAGATCCTCTGTGTGAGCAGTATGGTATGGGATTGCTGTCTTGCTGAGAATGCAAATTGCTAAGTGCTTTGGTGGTTATTTGCTGAGAGTAAATACTACTCTAGCCATTCGAGGCCACTATCTACAGCAAAATGCTTTTGTGGAGAATGTTTTATAGTTTTAGTCACATTTAGAATGGTGTACCATTCTAAAATTCTGTTAGAACCAACTGTCAGAATCTACACTGTCTCCAGTTATACTAAAATTTTGTATTTTTCTAATACCCAGTAAACAAGTGAGTCACTTAGGATTTAAAGTCTTGCTTGCTACATGGAAGGTTTTGTTGTACTTATATGTCTTGTCAGCGGTATTATCATGTAATCATCCTTGTGTTCATGTATTAAAATTTCTATTCTGCACAGATATATCATTAGCGTGGGGTAGGAAAAAAGATTCCTCCCATTTTTCTCAGGCCAGAGGCTTCTATGAAATGAATGGGTCTGTCTTCAGCAACAGCAGGCTTTGGTGTTGGTGACCTTCCAATCTTTCTAATCTGGAAACGTGCAGAAGGTGTCAGTTTTCCAAATTCTGAGGTAATCAATCTTTCAGCCAGATATGAAATTGGAGCCTACCAGCAGTTTTGGAAAGGGACAAATAAGAGGAATTGGATGATGACTTATGCAGCCCTGTCCCTTCTCTGTGCTGCTGATAACATCCCATGGCCTTGATAATTCCTATCATACTCTCCTCAGTCTGCCTCCAAGAAACTGTTCTAGGCTGAAAGGGAAGGAGGAAGGTACCCCAAAGTACAGCTCACTCATTCTTTTATATTGGTTAAAGGTATAGTTTATTTTCTGCAGAAGAATTTGACAGAGTTTGAAAATGAATAGAGTAAAAAATTGGGTTGTTTTTTTTTTGTTTGGTTGGTTGGTTAGCTTTTGCCTATAAGAGTTTCACAGAGTCAATAAGTAAGAATGTAACTCTTTGAGGCGGCTGACTATTAAAGAACTGTATCATGGTATAGGAGTTGTGGGAAGCAGAGTAACTGAGCCGAGGACTGATACTAGGAAAATTAAGGCTTAAGTAACCCAGAACTAGAAATACCCTTTTTAAAATTAATTCAGACACATCCTGGTGTCTTTAGATCCCATTGTATAGAATTTGTCATATAAAAAAATCTTCCCTTTGTCTCTTGTTTCTGTTTTCTACACTTTGTTCTATATTGTGCTTTAACTTCATGTGTCAGGCAAACTTTACAAGGGTCTAAAGTCAAAGGTTACCTAAAGCAAATATTAGTCATCTTGCTGTTAAGGAAGATGTGTCATGGAAGGAAGAGCATCTGTGTCAGGATTATTAGCTTGCTTTAAGATTAGAGTTGAATGGGATTTAATCACTAGGCAAAACCCCTGAAGGGTATCTGGCCTCAAGAGTGTTGGCTTAAAAAAAAAAAAATGCTTATATATGGTAGAGAAACCCTATAAAAGAATTCAAGAGAAGTTTCTGACAGGATCCTATAAACCCAGGCCCAGTCACTTCACTCTGATTATTTCTAGTCTCTCTTACCTAATGGATCTGAGATAAAAAAATTTTTTGAAAAGTGTTGGTACTCTATGTATGCTGCTAAAATGAAGTTAAGAAAGAAGTTTTACTTCTAGACTGGGCTTATATTAATCTGGGTATAAATGAAGGAGACATATTAACGATAGACTCCCCTGCTTTTAATTGGGGAAATAGGGCTTTTAAATTTTTGACCTCAACTAAAAATTATATGCAATAGTCTTTGTTTGAGTATGTTTGCAATATGTTCTGTTCTCAGAGATCTCTAAATCTTCACGTTCTAGTGATTTGGGGCATAGACTTAAGAGCAGATACACCATTGGTTCCTGCATTATTCTGACTCATTGTTAAAGCTGAGTGCTTGCTGTATTTTACTAGGAACTGCTGACTCTAGTTACCCATGGGATGGAGGACCTGGGAGGGATAGGAGTTAGGGTCTTTTAAAACTCTGGATTTAGCATTTGTCTCTCCTTAAGCACCAATCACAATTGGAGGTTGAAGGGCTGTCATTTCTGCAATGAACTGGAACTTTCAGAATAAAAAGGCCAAATCTTTAAAAATTATAAGAAAAGCAGAGGAAAAGGCTCTAAGAGTCTGTTACTTAAGAAATCCAGTTCTTGGCAATGGAATCCCTCCAGGATTCAAATTTGGGCTTTGTCTTGATTTGCTTTACTCAGTTGTGTTTTGAATTGAATAAATTATTTAAAAGTTAAATTTTGTATTAGTTCTAACGTGAGTGGAGTTGAATTTTATGTAGCACAGTGCTTTTGCAGTATGATTGGTGTGAAATACTGAATATCTTGTGGATTTTGTAGTCAGGTTAAATGACTGAGGAGTACCTACCCTAAGTATTATGTACTGGTCATCTAACTTCTTTTCTGTTCCCATCTACAGAACACCTACCCAGGTTGTGGTTTTAGAGCAGCCAAAGCTCACTAATGTTGATTAGTTCTAATCTCCACACTGGCCTCATATGTGAAACTTGCTTAAATTTTGGTAAATTTTAGAATGTTGGTTGTTACTTCACCAAAGCATTTTGAATGAATACAGCTCTGTTATAAAGGGGGAATAAGACTATAATTTGAAGGGAATTAAATATGTCAGTCCTCCTTTAAATGGTGCTTTTTGTAATCTTTAGTGCTGAGGGACAAAGCTGCTTTTCAATATTTCACAAAGGAGTGGCTTACAAGAATGGATTTTAAAGCTTTTCTCCAAATGTAATTTGTCACTGGATTCTGACATGCGTCTGAAAATTCTGTGATGTAACACATACTGAAATGTGAGTTTTTCCCCCATAAAACTGTGGAATAAAAGTATTATACAGCAATAATAT EMBV3_01995 GGTTTGGAAAAAAGACCAGACGACCATCATCGGGAGGTTCTGCACTGCTCCTCTTCCTGT Gene GeneID:515900|PLA1A:NM_001015610:77_cdna Constitutive 0 NULL GeneID:515900 1 GENE PLA1A MGC137475 phospholipase A1 member A EMBV3_12892 GACTGGTGGTAAAAGCTGAGGGGACCCATGACACCAACAACGGATGCCGCAAGGTAAAAA Gene GeneID:281686|CHRM5:XM_002690779:566_cdna Constitutive 0 NULL GeneID:281686 10 GENE CHRM5 NULL cholinergic receptor, muscarinic 5 EMBV3_23165 CAAACGAACTGCAGACTTTAAAAGCTGTTCCAAGGCATGGGAATTATGACCTGCCCCCCG Gene GeneID:790027|CCDC110:XM_002698677:177_cdna Constitutive 0 NULL GeneID:790027 27 GENE CCDC110 NULL coiled-coil domain containing 110 EMBV3_26768 GGGACACCAGGACTCATGCCCCTTCGAGCTGATGGTTTGCCCCAATGAAGGCTGCATGTT Gene GeneID:767973|RNF151:NM_001077038:324_cdna Constitutive 0 NULL GeneID:767973 25 GENE RNF151 MGC133560 ring finger protein 151 EMBV3_24521 GCCTGCTAGATATTATGTTCTTTGGTAGAGAATTCCCATAGTCTGTACTCAACAAGTGCC Gene BVT0101_009165 + 0 NULL GK000002.2:44491788-44546001 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102374 TCONS_00102377 TCONS_00102372 TCONS_00102373 TCONS_00102375 1 XLOC_061849 Coding TCONS_00102374 XLOC_061849 Coding Coding ARL5A 2:44468842-44496162 = TSS76238 5904 1 TCONS_00102374_2 179 6 0.784106299644936 0.00410260738938826 0.00343653898830564 0.00221887579358291 0.00306298144166001 0.00185495196109554 0.00109063044413355 0.00170757569016524 0.00214119822874085 0.00552873391680554 0.000782772120928662 0.000161114474656 0.000182554678211844 1.14811033666322e-06 0.00135106946174654 3.70269742546964e-07 0.0117338593487425 0.00662278004570249 0.00538573896846437 0.00381033013162003 0.00279455985166446 0.0013683651300907 0.00334672916578899 0.00227192169302595 0.00583804366932468 5.59362975848576e-08 0.00278162975804729 0.00161882278727946 0.000682726354476597 0.000602623479926456 0.00191710793313418 XM_005202431.1 ARL5A PREDICTED: Bos taurus ADP-ribosylation factor-like 5A (ARL5A), 0.0 9993 100.00 0.938346883468835 NM_012097.3 ARL5A Homo sapiens ADP-ribosylation factor-like 5A (ARL5A), transcript 0.0 3027 82.05 0.514058265582656 TCONS_00102374_2 sp|Q2KJ96|ARL5A_BOVIN ARL5A_BOVIN ADP-ribosylation factor-like protein 5A; 4e-132 372 100.00 0.994413407821229 7 noncoding 1 1 1 0 1.48420399794514 0.022822508535989 -0.0105412280074982 0.838959548421484 CGCCCGCCTGGTCGCCGCCGCCGCAGCCGCCCGAAAGGAGCTTGGGGAGGACGGTGGCCCGCGAGGTTCGTCGCACACAACGCGGCGGCGATGTCCGCGAGCCAGGCGGGAGCCGCGGCGGCAGCGGCGGGGCCTCAAGCACGGCACGGCGGCCTGGGCTTCGGCCTCCCTCCGGTTCCTAAGAAGCGGGCCGACGGCCAGCGCGGCAGCAGCAGCGGCAGAGACGGAGGCTCCGGCGCGTCTCTCTCCTCCCCTTGAGCCTGAGCCGGGGGAGGCCAGGCGGCCCGGGTGGCTGGAGAGGGGTCCGCTGCCCGAGAATGGGAATTCTCTTCACCAGGATATGGAGACTGTTCAATCACCAGGAGCACAAAGTTATCATTGTTGGGCTGGATAATGCAGGGAAAACTACCATCCTTTACCAGTTTTCTATGAATGAAGTTGTGCATACATCCCCAACAATAGGAAGTAATGTAGAAGAGATAGTGATTAATAATACACGTTTTCTAATGTGGGATATCGGTGGCCAAGAATCTCTTCGTTCTTCCTGGAACACTTACTATACTAACACGGAGTTTGTAATAGTTGTTGTGGACAGTACAGACAGAGAAAGGATTTCTGTAACTAGAGAAGAACTCTATAAAATGTTAGCCCATGAGGACCTAAGGAAAGCTGGATTGCTGATTTTTGCTAACAAACAAGATGTTAAAGGATGCATGACTGTAGCAGAAATCTCCCAGTTTTTGAAACTAACTTCTATTAAAGATCACCAGTGGCACATCCAGGCATGCTGTGCTCTTACTGGCGAGGGATTATGCCAAGGACTTGAATGGATGATGTCACGACTTAAGATTAGATGATCTCTACTGACCTCTTCTCATAGACTTTGTGTAAATGAAGTGCTGGACCTTACCTGAAAGCTGCAAAAATTAATGGTTTAGATATATTTATAATAAACTGATTTAAACATTTAAACTTTTTCTATAAGAAGAAAAATTAAGACCACTTATTTGAAAACACAGATGAAGTTTCACCTTTCAATCTGCTTTCTTATTAGTTCCTTCCAAAGCAAGGTCTTAAAGCTGTGATTGACATTTTTCTCATAATGAATCCTCTCAGGACATTGTGTAGCCTGTGGTAAGTACAAAGGGAGAGGAAGACATTTTTAACTTTCAGAGCTTTATTATCAGTATAACCCTCCCTTGTTGAATGTTGTTCTCTTCCTGTTCCATTAAGTCAAAATACAAATCAGCACAGATACTCAGTTTCCAATATTTCAAAATGTAATTATGAAAAGTATTTTGCATAAGGTTGTGTATGTATTGTGTATATACCTCAAGTTCGAGTTAATGGCTTTGATTTATGTTCTTAAAGAAAAGCAAATAACACAAAAACTAATGCCCTTAGTTACAAACGTACTGGGATGAGTACTGGCATTGATGCTGAGTGCCATTTTGTACTTCCCCTATGTTCTCTGTATTATACTAACCCACCCCCAAATCATTGAGCCACTCTTTAAAAAAAAAAAAAAAGGAAAAAGCTTCACGTTGTGTCCCTAATTTTTTGTTGAGCAAATCACGTACATGGAAAGCTGTAATCTAGCTGAGTGGAGTATCTATCATATTCTTAACTTAGTATTACTGGTGGACAGAAGAGCACACTGAGCAGTTACCAGATTGCTCCCTGTATTGGGCCTTATGCCATCTAAATTTACTGAGTGAATTGTTAATCCATTAATTGGCTGATCATTAATTGTGATTCAAATTATAAAGTGATTTTTTCCAGCATTAATTGGAAACTGTTGTGTGAAATATGTCTACCAAGAGAAGTATCACACCATAAACATTGTCAAATAATTTAGCTACAATCTTCTTAGATACCAAATCATATGTCAAGCATTTAAAGTGAATTTGAGATGAAAGGTGAAGCATATTTTCTAAGCAGTGAAGATCATTTCTTAATTTGAAAATTTCTGATTTCTTATCTTAGGAGTTGAAATTGTTTGAGGATTTATTTGTGTCTAAGTTTTCTTTTATCATCTTACACCACGTGAATGTATTGTTTGACAGTTACAAAATACGAATTTTTTTAATGCTTTTAAGAATTTGGTTTAAAAATTGATCAACGTAATGTATTATTTTTATTAAGAAGTAACTTAGCCCCCAAACTTTTTATGTTTACTTGGGTATTTCTTTTTTCTGCATCTGAAAATCTAAGGTATTTCTGTTGTAACTGTAAGCAAACTTATCCTAAATATGTTAAAACATATTCTTGGGTACTATGTTGGTATATCTTTCATGCCCTGAAAATCTGGTGACTAGTGCAAAACTGACGTGTTTTAGAATATTCAAGGGAAAAAAATTTTATTTTATTTTATTTTTGGGGGGAAAAAAATTTTAATACCAGCCTTTTAAATTTCAAAGATTTTGATGAGAAATAGTACATACTATAATTATTGACAAAACTCGGAAAATTCCTTTCTGTAAAATATAAAATACTCATTATATAAATCCAAGTCAGGCATGGGAGATCAGTGTTTAAAATTATATGTTATGTTTTGTTTCATGTTCAAAATGCAAGCATAACACTTTAATATTTGTCAACTTCCTTTTGAAAAGTAAATCCTAAATTACTAACTTTAGTTGTTCATATGTCCTCATACTTTTTCAAATCACTATAAGGAATTGCTTGTATATTAAAAACCCAAATCTATTTTTAGATGTTGCAGTGTCATCAGAAACAAATACTCTGTAAAGTAACCCAGCAAATCCACACCTTTTATCCTTTTTGCCTTTCAGTTTGAGTAATTATAATTTAGTCCCTTGGATTGCTGCCACACCAGTTCAACTGTACACCTGCACAGTCTGTCCCTTGTCATCAAGGTGTTGGCCAAAATTTAATCTTAACTGGATGTTTAAAGCGTGTCAGGTGTAGTGATTGACATGGCATCGTGAGAATGCATGTATTCTTATGCCACGTTGATAAACATGCTTTTTGGTTATATCCTACCCTCCAGGCCAAGCATTAGAAATGAGATGGGTACCTTTATTTTTGTTGTTTTAGTCGCTAAGTTGTGTCTGATGCTTTTGTGACCCCATGTACTGTAGGGTACCTTTGTACTTGTGCATAAAACCAGAATTACAGCAGAAAATTTTTTTTAATTTTAATGTGAAAATACATCAAAATCATTTTAACAGTATTACTTCCAAATAACATGGAGCACCTCATGAATAGTCATGTTGGCAATTTATATGTAGTTTTTAAGTGGAATTAAGCAAAGGGGATTGTTTTTGGTTTTTTAATATACTGCGTTTGGGTTAAACAAACATCTTATTTAGGGTTGTTACACTCAACTTTGAAAAGAACAAAGCTCCATACCTCTGTTCACGTGACTGGATTTAAATATCCTATGTTTGATACTAATTTTGAAAATTGTGTAACTTCTCTCAATACCGCGATAAAAGGAACCATATTGCTAACTGCATTTAAATATGTTTAATTTTGTCATGTAGCATTTAGAAGGTATATCTTACGCATTCTAATGAGGATCCTTGTCTGAAATTTTCCAGTTCTGTTTTCTTTGGCCCTCATGGATGGGCAAAGAATACATTGAAGCCTGGTGGTTTGGGGTGCAGAGGAAAGTGGGTAGGGAATATGACATTTTGCCTTAAGAATAAAAAAGTGCTTCACCTGCTGTCTGGCATTTTTAATGCAGGTAGTTAAAGTGATTTTAGAAGCATGGCATGAAATAGAAAGAGTTTCTGTTTTCTGGTCTTCAGGAAGTGCCTGGTAGGTAGTGACAGTGGGATCAGAGGAGTGCAGGGCACCGAGCAGAGGCAGGCAGTGCCTGAGACATGCTTGGCTCTTTTGTCTGAGTGTATAGCACTAAGATGCCTAGAAATGGGATTTGACTGTCCCATCTCTTAGGCCCTTTACATTTCTTGCTGTGACTACAGCAACCACATACAGTACAGACAACCTCAGAATTTGTCCATATTAGTGCAAATAGAAAAACTGTAGACAACGTTCTAGTTTTCTCTGCAGGCCTTTTCAGGAATTTATCTGTCATGTTCTACTTTGTATATAGGGGATAGCAGCACATCCCAGACTATCTGTGAACTCTGGGGTTATCTTCTCTCAATTGCCGAGTTGTATCCTGAAATGAATCCATCTTTCAAGGCCAGGTTTTGCATGACTTAACTGTGAACCCTGCCACTGTCCAAGTATAATCTGGAACTTCTTGCTTTGGGATTGGCTTAGCTCAGCATCCCCTCCACTCCTTTCCCCATCAACAAAGATATGTTCTCTTGGTCCTGGAGATATTCTCAACTTTACCTATATCCATTATTCTCCAAACTGCTAGCCTCTAAGTTGGTTCTCTTGTCCTGTGCTATCCTCCACTGGCTTGATTCATTGATTTGCACTTTGCTTATTAGAGAGTACTGTCAGAGTTGTTGAGTACGTCACAAACTGGCTTGCTGTGTGCACAGCACATAAATGCCTGCAGTAAAGTCCTTTAAATTATACTGTATTTAGCATTTTAATGCTTCTTAAACTTTAGCTTCTCACATTGAAAAGTAGATTCAGAAAGATAAGAGAAGTACCTAGACTGCCAGCTCCTTGAGCTGCTAGTTAGATGTGAAAGGGATTAAGTTATATACATGTATTCTCTTCCCATTACCAAAAATGAGGTATGTGTTAAGTAATATCAGTACAAATAATATGAGGAGAAAGATGACAAACCAAATCATATATGTAGTGTTTAACCTGAAGCCATCCCCACATCCTTAAAACCATAAACCACATCCCATTTTCCCCCCTCATGCTTAAAGAACAGAGGTAAACATTAACTGTCTAAAGGAATTGGTAATGAGACACGTATGATTACAAACCAAACCTGTTGAAATGAACTTTAAAAGACATCAGAATTATCAGCCATCATGTTTCGACACTGTAAATGCAGATTTAATATAGAAAATAATATTTTTAAAGTTCTGCTTATGTAAAAATAGTACTTCTATATCATGCTCCCGCAAAGAATGTGTGATATTTAAGACCGGAATGGTGGAGTAAAGGAAAGAAAGAATTTAAAAACTTCGTATGCTAAAGAATGACTGCTTCTATTAAACCCTAAAATTGTGTATGGAGTTATGAAGAAATTGTAACAGGATACAGTTGGGTTAATTATGCAATATATCTTACCAATTGTCTAGCCCTTGTGTATTGTTCTAAAAACTAAAGTTTGAATCTTTATGGTCTTGCCTGCTAGATATTATGTTCTTTGGTAGAGAATTCCCATAGTCTGTACTCAACAAGTGCCTAAAATTGATTTGTGTTGATTTTTAAGTCCATCTAATAAATTATATGTGTTTTCTATGGTATTATATGTGCTTGGCTTACTGATGATACAGCCTTGAGGGTTTTTAAGTCATAATTTTTGCTTTGAATAAAAAGCCTTGAAGATGAAAATACCCATCCTGACCTTGAATAACCCATAGGTTAAGGAAGCAGGAGCAAAACCATTTTTTCCTCTTTGCAAGTACACATATTCCCTGACTCTGGTGTTAATGCCAAAACTAGAAAACACTCTGTTGCTGTTTTTTAAAATAGTTTTAACACACATAAAATTATATTGTGTGTTTTAAAACCTTAGTAAAAGTTTGTTGCCTGTGTAAGAGTAGCCTCTTAATTCTCCTCATACTTAGTGGTTAGTAATTTTGTCCTATCGTTTAGATCTTGAGCCATTTGATGTGCATGCACACCAGAATCCTTCCTCTTTAGATTCTTCTTAAAAAGTAAAATATTTGATAGGCTGCTGTTACATTTCTCTTATGCATTCTTCTTTTTTTCTTTTTCTTTCATTTTCTTTATTTCCTTCTCCCTCCTTCCTTTCTCCCTCCCTCCCTC EMBV3_36474 GGTGTCTGTGCTCACAACTTCGGTTGCCCCTTTGCTTAACCCATTCATCTACACACTTCG Gene GeneID:506139|LOC506139:XM_002687429:188_cdna Constitutive 0 NULL GeneID:506139 5 GENE LOC506139 NULL similar to olfactory receptor 769 EMBV3_43408 TGAGTGCTCACATCCACAGGAATACAACACTCCAAGCATTAAAGACTGGCAGCAGATTTC Gene GeneID:616136|LOC616136:XM_002690099:1_cdna Constitutive 0 NULL GeneID:616136 9 GENE LOC616136 NULL hypothetical LOC616136 EMBV3_10154 CTGGTTCTCATTCCTCCTCTATGTCATTGCCATGGTCCTCTGGCCACTCTACCAGTTCAA Gene GeneID:100139303|LOC100139303:XM_002696550:18_cdna Constitutive 0 NULL GeneID:100139303 21 GENE LOC100139303 NULL similar to myeloid-associated differentiation marker EMBV3_17548 CCGTCGGACGCCGACCTCGACCGCGGGCTGCCCATCTGCCAGCAAGGCCAAGATTAGAGC Variant GeneID:618047|DNAJC15:NM_001080332:220_cdna 128^330 4 EMBV3_11622 GeneID:618047 12 GENE DNAJC15 MGC148559 DnaJ (Hsp40) homolog, subfamily C, member 15 EMBV3_04419 TTATCCTGGGGTCCCTTCTCTTCCTGGTCCTCATCATCCTGGTGACTCAGCTACTCAGAT Gene GeneID:751803|LOC751803:XR_084194:131_cdna Constitutive 0 NULL GeneID:751803 5 GENE LOC751803 NULL WC1 isolate CH196 EMBV3_40678 CAGTTTCTGACTGAATGGCTGGTTAAAGGGAAGAAGTCTCCAAGTCCCTTCTCTCCTGGC Gene GeneID:281542|TP53:NM_174201:421_cdna Constitutive 0 NULL GeneID:281542 19 GENE TP53 NULL tumor protein p53 EMBV3_25994 CACCGTGCAGATGAAGACATGCAGGCATGGAGAAAGCAAGTAGTTTACCCAAGATTCCCC Gene BVV0102_246549 + 0 NULL GK000006.2:109095989-109119313 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02202 CTGTTAATAATAGGTACTGTACGGGGCTCCGGGTAAGTGTCACTGGGGTAGGACCTCTAT Gene GeneID:535699|DLG5:XM_002698887:21_cdna Constitutive 0 NULL GeneID:535699 28 GENE DLG5 NULL discs, large homolog 5 (Drosophila) EMBV3_30771 CGAGGCTGTTTGGAAAGCCAGGGGCAGCTGCAAAATTCCGAAAATGGGGTATAAGGCATT Gene GeneID:613533|FLNB:XM_002696991:363_cdna Constitutive 0 NULL GeneID:613533 22 GENE FLNB NULL filamin B, beta EMBV3_29228 GTCAGCATGACTGTGCTGTTCTCTAGTCGCATTTGGCTCTGAGGATGCAGATGTCGGGTA Gene BVT0102_205343 + 1 EMBV3_04049 GK000020.2:7948861-7973675 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13795 GCGTCATGCTCAAATTGGTGGAAAAACTCGACATCAGACACCCTGAAGAGCTTTCTCTAT Variant GeneID:616981|FERMT2:NM_001101264:137_cdna 282^515 3 EMBV3_11602 GeneID:616981 10 GENE FERMT2 NULL fermitin family homolog 2 (Drosophila) EMBV3_39942 TGAGCTTTGTTTATATGCCCATCCCTGGGTGTTCTGTCCATGAGGAGAGGCAGCTTTGTG Gene GeneID:537728|PHF2:XM_002689850:41_cdna Constitutive 0 NULL GeneID:537728 8 GENE PHF2 NULL PHD finger protein 2 EMBV3_19842 AAATGTGGGTGACATGTTTGTGGAGCATCTGAGCACCGGGATGCAAGGGGTGCACAAGCT Gene GeneID:100337388|LOC100337388:XM_002688472:2_cdna Constitutive 0 NULL GeneID:100337388 6 GENE LOC100337388 NULL mannosidase, alpha, class 2B, member 2-like EMBV3_27550 AGCTACACCCAAATGACAACTTTACACAAAAAAATGTGCATAGCACTCTAACCTTTGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11491 CTGCTCCTCAAATCCTGCAATGGTTCTCTGAGATGCAAGAACAGGAAGTGGAAATAAGCC Gene GeneID:519219|SERPINI2:NM_001102054:133_cdna Constitutive 0 NULL GeneID:519219 1 GENE SERPINI2 MGC157389 serpin peptidase inhibitor, clade I (pancpin), member 2 EMBV3_00767 TCCTGAGCAGAAGGGAAAATGAGCTTAAACATGAGGCTTGGAGGAGAAAGAAGGGCTGGG Gene BVV0102_322266 + 0 NULL GK000001.2:85991960-86445678 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001444 TCONS_00001447 TCONS_00001449 TCONS_00001445 TCONS_00001448 1 XLOC_000361 Coding TCONS_00001449 XLOC_000361 NonCoding Coding LOC100849035 1:86029438-86135938 j TSS742 576 1 TCONS_00001449_1 53 0.572916666666667 3 0.994619667790308 0.000904521279348887 0.000243363598217358 0.001871099147085 0.0005816519117029 0.000113563056687247 1.93257442328702e-05 0.000157607208364074 0.000117134179851884 0.000178364380057123 1.50799653689581e-05 1.39099138001547e-05 6.20776408323233e-05 2.90570563125294e-06 4.47803123168595e-05 6.18232871811678e-07 0.000687799978358877 1.44112263836222e-05 7.86158929662221e-05 0.00144622091303409 0.00026096667018017 5.46274051802918e-10 2.72689415326666e-05 0 5.82099525762674e-05 0.0012149881940221 2.01106927904242e-08 0.00011176563650908 6.8091823487757e-05 3.71956815874474e-14 2.95739487543436e-05 XM_005223069.1 CCR9 PREDICTED: Bos taurus chemokine (C-C motif) receptor 9 (CCR9), 9e-81 304 86.05 0.446180555555556 0 noncoding 1 1 1 1 -0.134246433465538 0.477028827797974 0.0411383957035179 0.566704577799698 ACCATATCGAAAGTCTAGTCTATGGTAATTTTAGAATTTGAGCTGCTGGCCTGCTGATGGGGGTTCCTGAGCAGAAGGGAAAATGAGCTTAAACATGAGGCTTGGAGGAGAAAGAAGGGCTGGGGAGAAATATGAATGTCTATTAGAATCATCCAGAGCATGGATTGGACTGATGCTAAAGCTCCAGTACTTTGGCCACCTGATGAGAAGAGCTGACTCCCTGGAAGAGACCCTGATGCTTTGAAAGATTGAGGGCAAGAGGAAAAGGGGGTGACAGAGGATGAGATAGTTGGATGGCATCACAGACTCAATGGACATGAGTTTAAGCAAACTCCGGGAGATAGTCAAGGACAGGGGAGCCTGATGTGCTGCAGCCCATGGGGTCACAAAGAGTTGGACATGACTGAGTGACTGAACAACAACAACAACAACGCACACAGATTGGGAAAGTCCCAAATTTCAATCATCTCTATGGAATGGCCTTGAAACAGCAATGCTCATGACTACTTATGAAATATCTTCTGTGACAGACAGATAATAGACACTCCACCCATCCTGTCTTATAAAAAGTATATT EMBV3_04412 ACTTCAGGGTGATTTTTTAGCAGTAACCAGAGCTGACAATCTAACTCCCCTCCACCGCCC Gene GeneID:790307|SYNGAP1:XM_002697179:221_cdna Constitutive 0 NULL GeneID:790307 23 GENE SYNGAP1 NULL synaptic Ras GTPase activating protein 1 homolog (rat) EMBV3_14906 TGATCAAGAGGAACAAGCAGACGTACAGCACCGAGCCGAATAACCTGAAAGCGCGCAACT Gene GeneID:618702|RPL28:NM_001035503:196_cdna Constitutive 2 NULL GeneID:618702 18 GENE RPL28 MGC127438 ribosomal protein L28 EMBV3_35558 ATCTCCGCCTCAAGGAAACTGCAGCTGAAGGACTTGTGCCGACAGCTCCACGCTCGTGTG Variant GeneID:511094|TNNI3:NM_001040517:157_cdna 306^437 3 EMBV3_02523 GeneID:511094 18 GENE TNNI3 NULL troponin I type 3 (cardiac) EMBV3_21105 TACCAGAAGTAAACAACTCCCCTTCCCACTTAATCAGGAGTGAGACCTAGTGGGGGAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12949 GATGGGATCTGGACGTTTCCCATGATGCTGATTGCTACTGAACCTGATGTGGATGAGGTC Gene GeneID:613276|LOC613276:XM_002700241:256_cdna Constitutive 0 NULL GeneID:613276 X GENE LOC613276 NULL hypothetical LOC613276 EMBV3_26329 AGCCGTGCTGCTTTAGCTGTAGAACCTTGGGCAAATCACTTCATCCCTTTTGAGTCCGTG Gene GeneID:614493|BNIPL:NM_001079621:160_cdna Constitutive 0 NULL GeneID:614493 3 GENE BNIPL NULL BCL2/adenovirus E1B 19kD interacting protein like EMBV3_06275 CAGCTTCCTGAGGATGATGGGCTGGAGCAGGGTCTGGCCGCCATCCATCTCACAGTGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32968 AGGCTGCAACAGTGCACCGCCTACGTGAACATGCTGAAGGCCCTGTTCATAAGCATCAAT Gene GeneID:404082|TMEM176A:NM_205779:577_cdna Constitutive 0 NULL GeneID:404082 4 GENE TMEM176A CL1 transmembrane protein 176A EMBV3_27636 TGTGTGCCCGGTGTGTGTCAGCATTACACCTGTGCCACGCTCATTCCTGGACCTCTAACA Gene GeneID:789858|KRTAP5-6:XM_002699409:53_cdna Constitutive 0 NULL GeneID:789858 29 GENE KRTAP5-6 KRTAP5-3 keratin associated protein 5-6 EMBV3_24296 TCTGCTTTATCTTTTCATAAAGGGTTGGAAAATGTGTTTGCTGCCTTGCTCCTAGCAGAC Gene GeneID:540248|SMAD4:NM_001076209:167_cdna Constitutive 2 NULL GeneID:540248 24 GENE SMAD4 NULL SMAD family member 4 EMBV3_43761 TAGAGAGTAGTGGAAAGCAGGTGTGGGACAGCGAGGAAACCGTCTTTCTGCCTCTTCTCA Gene GeneID:100336872|LOC100336872:XM_002694900:959_cdna Constitutive 0 NULL GeneID:100336872 18 GENE LOC100336872 NULL hypothetical protein LOC100336872 EMBV3_07640 TGTGGTTAGAAACCCAGTTACACCCGGGCACCTTGGCAAAGCAGCCGTGTTTGTGGAACA Gene BVV0102_259953 + 1 EMBV3_39173 GK000008.2:5644629-5672115 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22171 GGATCTCACGCGCCACAACTGAAGATCGTGCATGTGCAACTAAGACATTGTGCAGCCAAA Gene GeneID:508668|RIPK4:NM_001100327:9_cdna Constitutive 2 NULL GeneID:508668 1 GENE RIPK4 NULL receptor-interacting serine-threonine kinase 4 EMBV3_15260 GAACCCATTCATGCTCTTCCTGTGCCTCGCCATCCTGCTGGAGCACCGTGACCACATCAT Gene GeneID:515568|TBC1D25:XM_002700073:144_cdna Constitutive 0 NULL GeneID:515568 X GENE TBC1D25 NULL TBC1 domain family, member 25 EMBV3_29648 CTTCTGTGGGCGGTTTCTTCCTCTTACGCTATTTAGTGAGATCATAGTTGCTGCTGTATG Gene BVV0102_171201 + 1 EMBV3_29012 GK000027.2:39897988-39948524 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13869 GCCCGATAAGCATCACATGAGCTGCGGAAATCCTTTTATACATTCTGTACATACGTAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42570 AGCTTGTTACGGGTCCAAGCCCAAACTCGCAGGAGAGAACCTGAAACTAACAACTGGCAA Gene GeneID:525161|DCAF12:NM_001167896:37_cdna UTR3_Alt 2 NULL GeneID:525161 8 GENE DCAF12 WDR40A DDB1 and CUL4 associated factor 12 EMBV3_31511 GGTATGTCCACCATCTCAACAAAGCTCCTCAACTCCTCCTGAAGGGCTCAATGACAAACC Gene GeneID:100296598|LOC100296598:XM_002690595:35_cdna Constitutive 0 NULL GeneID:100296598 10 GENE LOC100296598 NULL hypothetical protein LOC100296598 EMBV3_23573 CCATGGTGCCTTTTCCACTCCCACGGGTAGAATGCTGACTTACAGAGATTGCTTGGGACT Gene GeneID:407154|GJB2:NM_001083637:11_cdna UTR3_Alt 1 NULL GeneID:407154 12 GENE GJB2 CX26 gap junction protein, beta 2, 26kDa EMBV3_06537 GAAGGGGGCACTTTAATCTCACGTGACTTTCAGTCAAGTGCAATGTGGGGAAAACAGCTG Gene BVT0101_005375 - 1 EMBV3_17001 GK000024.2:40366292-40384891 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138977 TCONS_00138976 TCONS_00138980 TCONS_00138979 TCONS_00138981 TCONS_00138982 1 XLOC_084780 Coding TCONS_00138981 XLOC_084780 Coding Coding ARHGAP28 24:40265833-40370288 j TSS104042 6370 1 TCONS_00138981_4 708 0.00753532182103611 19 0.939198115917054 7.58336505140759e-10 0 6.47616025594171e-08 7.89830732374057e-14 4.25039985850004e-11 1.93228641672634e-10 3.9597675398807e-10 3.130271747613e-09 1.11041511819606e-10 2.58020697059286e-05 2.89952767150684e-05 9.15621160246328e-06 2.8476920525447e-06 6.98259169544268e-11 1.58986505537105e-40 0.00297343518768221 0.000174362457700416 0.00166033250892689 2.36464176491769e-11 0 0 0.00166509370807816 0.00185548079335339 0.000299409798839882 4.05524898543069e-12 5.96415468972861e-13 6.15941023554773e-10 0.0001141860203646 1.17587267425546e-11 0.000297804666457946 XM_002697796.2 ARHGAP28 PREDICTED: Bos taurus Rho GTPase activating protein 28 (ARHGAP28), 0.0 9771 100.00 0.850392464678179 XM_005258144.1 ARHGAP28 PREDICTED: Homo sapiens Rho GTPase activating protein 28 (ARHGAP28), transcript variant X1, mRNA. 0.0 3458 74.32 0.84756671899529 TCONS_00138981_4 sp|Q9P2N2|RHG28_HUMAN RHG28_HUMAN Rho GTPase-activating protein 28; 0.0 1159 80.62 0.997175141242938 1 coding 0 0 1 1 -0.0207935035965186 0.873924877695045 -0.00713716640016768 0.884436243205207 CCTTTGTTTCTCGGGCCCGCAGAGCTGGAGGCAGCTGCGGGACAGGTCCTGGCTCCCACGTGGAGAGGGAGACAGAACTCTGCAGGTGGCGGGGTGCAGTGGGCCAGAGGATGGCCTCCCCATCCCTGGGCCATGAGGACACCGGGCCACAGAGATGTTTTGAGTGTCCATCTCCCTTGATAGCATTCGTGACCCTCTTAACCTGCTAAGAGAAAGTCCATCCCTCGCTGCCGAAGAATCAACAGGATGCTCTCCAATGAGTCCCTTCAGTCCCCGGCGTTCAGCCGCTCCAACTCTCAAGCCTCCGTAGACAGCGCCTCCATGGAGAATTTCTGGCGGGAAATAGAAAGCATCAAAGAGACCAGCCTCGGGGCTCAGGAGGAACAGACGCCTGCCGAGGCCAAGCCCCTGGACGAAGGAGAACTTGAAGCAGAGTGGTTGCAAGATGTTGGTTTATCAACCCTGATCTCGGGTGATGAGGAGGAAGATGGCAAAGCCTTGCTCTCTACTTTGACTCGAACCCAGGCAGCTGCAGTGAAGAAGAGATACAATACTTACACACAAACCTTGAGGAAAAAGAACAAGCAGTCTGTCAGGGATGTCAGAGACATCTTCGGAACCAGCGAATCTCCTCCAGATGAGTTTTGCTGTGTCCCAGCTCCTCTTCTGGATGTGAGCCCGGATGAAGAAAGGATGCCAACGGTCCCTTGCAGAAATGGTCAGCTGCCAGGTGATACCTGTGACAGCCACGCTAGCGAGCTGGATGGCGCCCGGGAGGGGAAAGCGCTGCCAGGAATCATCAAAGCCAGCGGCCCCTTGCCAGATGGTGCTTCTCTCAACAGTAGTACCCTGTCAGATGGGTCCCAGGATGAAGAATGGAGTTTTACTGTTCCCAGGAGTGGCTCCATGTCCATCCTGGAGGCCATTCCAGACGTGCCAGTTCATTCCAACGTCGCGGCAGACCCTGGACGGTCGGCGCGGAACGCTGCAAGTGATGATGAATATCTGGAAAAAAACATTCCGGTAGAAGCTGAAGAGCTGTCCTTTGAAGTATCATATTCAGAAAAGCTAACACAGGCTCCAAAAAGGAACAGATTTAAGAAGTTAGATTTTAAGAAAGAAGACTATGTTTTACCTAAATTTGTTGTTCAGAAAACCAGATTTGGCCTAACCAAAGCAGAAGATCTGTCTGCGGAAGACATGAAGAAAATCCGCCATCTCTCTCTGATTGAATTGACGGCCTTTTTTGATGCCTTTCGAATTCAGCTGAAAAGAAACAAAACAGAGAAAGTCAAAGGACGAGACAGTGGGATTTTTGGAGTTCCCCTCACAGTCCTGCTAGAAAATGACCGAAGGAAAGACTCTGGGGTCAAAGTTCCCCTTGTGTTACAAAAGTTCTTTGAGAAAGTTGAGGAATCGGGTCTGGAATCTGAAGGGATCTTTCGACTTTCAGGATGTACTGCCAAAGTCAAGCAATACCGTGAAGAACTGGATGCCAAGTTTAATGCTGACAAGTTTAAATGGGAGAAAATGTGCCATAGAGAAGCTGCAGTGATGCTGAAAGCCTTTTTCAGAGAACTGCCCACCTCTCTCTTTCCCGTGGAATATATACCTGCCTTCATCACTCTAATGGAAAGAGGGCCTCACATCCGAGTACAGTTTCAAGCCTTACACCTCATGGTCATGGCACTGCCTGATGCCAACAGGGACACAGCCCAGGCCCTCATGACATTCTTCAATAAAGTCATTGCCAATGAATCAAAAAATCGCATGAGTATATGGAACATTTCTACTGTCATGGCACCCAATCTTTTCTTCAGTAGAAGCAAACATTCTGACTGTGAAGAATTACTCTTAGCAAACACTGCTGCCCACATCATCCGTCTGATGCTCAAGTACCAGGAGATGTTGTGGACGGTTCCGTCTTTCTTAATCTCTCAAGTCAGAAGAATGAATGAAGCCACCATGTTGTTAAAGAAGCCGCTCCCAAGTGTCAAAAAGCTGCTAAGGAGGAAGACCATAGAACGAGGGGTTACAAGCCCCAAGACATCAAAGGTACTGCAAAAATCACCCTCTACAAGAAGAATGTCCGACGTGCCAGAGGGCGTCATAAGGGTCCACGCGCCCCTTCTCTCCAAGGTGTCCATGGCCATTCAACTCAACAGTCAAACCAAAGTCAAAGACATCCTGGCAAAATTTCAATGTGAGAACAGTCATGGTTCATCGGAATGCATTAAGATCCAGAACCAAAGGTTATATGAAATTGGAGGTAATATAGGACAGCACTGCTTGGATCCGGATGCTTATATACTGGATGTTTATCATGTGAATCCCCAGGCAGAATGGGTGATTAAACCCCAACAGAGTGTTTGAAATCACCCCCCAAGATGGCAGCTATCATATATTACACGCCAAGGAGTCCTACATTCAGTAGGGAAAAAGCAAGCTTCCGACATGTCTGTCCCTAGACCCTCTCAGTGTTTCTCAGCCCAACTGGTGTCTCCCGGAATTGTCAGCATGAATCGTGGATGAGGAGCTGGTTGACCATCTGAGCTGAAGCCGTCTCATGGTGGTTCCTTGGTAAGAGTGAAGGAAAGAGGGTGTGATCCTTCCAGAAGAAAGGCCAGCATAGAATATGGAGCTCTCATCATTTCTGATACTTTGACTCACAACAGAAATGAGCTTGGTCTTTATACCTGGGGATAAGAGGCACTTCTCGACGTAGCAAATGCTGCCAAACACAGGAGGTAGAAGAGACTTTTTTATACCTATGTTTTATATATATATATATAGAGACCTTTTTGAATAAGAATGCAAGAAAAAAACACAAAAATTTCTTCTCTGAACAGTAATTTAGATCTCCTTTCCAAAGAGAATCTGTTTCCAAAGTCACACATACAATATTTATGCTCTGACTTGCTCCTGAATTGGAGGAGGAGGAACTTCTGTGTACAGCCCACTGTACTGTTCTGAATGCTGTACCGTGTTGTGACTGCCTGCTTTCTGGTGCAAGTGAACATTTCCCCATCATGGACTATTGAGAACGGATACTTTTAAAGCTTACTCTGTTACGAACACATAGTTAAGGTCAGGTTTACAAAGGATTTTCTTGTGCTTCCATAACCTTCGGTGTAGTCAGCAGTCCTGGAGCTTCTGTTTCTCATCATGATGATGGTGCTCAGTGAATAGCTCTCCATGTGCCAGGCCCAGATTGTCTTTCCTCCCCAAACAGATCGTTTTTTAAGTTTCATGACTGTAGATAATCACTTCTGCAGCCCCAGTGTTCAAATGCAGAACTGCCTTTATCCAACTGCTCTTTATCCAAGAGTGCCGAAAAACACCATTCTATCCAGACTTCCTATGCTATAAAAACAGATTTTGTTTGTGTTCATCCATCATAGACTTGGCCAGGCTCCATGGATTAGCATCAGGCTTTAGAATCAGATGCATGTTGGGTGACCTGAAAGCTGACTTGCTCCCAGAAGCCCACAGGGCCATTTTTCCAGGCCTGCAGTTGGTGAGAAAGCACAGTTCTCCACGATTCTGAGAGCAGATCTGACATGTGCTGAGAGGTCAGGGAGCCCTGCCTTTCCTCTGGGGACTGCAGCATGTAGAAACAGGGATAGAGGTCTCACTTATCCCACATGTGTGCTTTGGATTAGATCTACAGCTTGAGATTTTGACAAGCTTATGTGAGTTTTAATGAAATTTAACATCCAAATGACTCTCCTTTGCAGTTCAAACAACAGACAAAGTTGCTTACAAATGCAGAAAACACTTTATCTACTTGCATTGGTAGGTGGGTTCTTTACCACTAGTGCCACCTGGGAAGCCCTTTATCTACTTACCAAGTCTCAGAACATAATGTGATGATAATTTAAGCCTGTATTCTAGAAGAAATCTTTTCCATGCTCATTATGCCTTGATATCTATAAAACCTTGATTTATATGCAACGTTCCTGCCCATTGGAGCTGTGTTACATTTTTGTGGAAAGCTAATATCCATTCATTTTGTTTATTTGAGAGTTTTTATTTCCTTTGCTTGAAAACCCAGTGGAAGAAAAACATGCATTCTGTTGGTTTATATTTATTCCTATATTTCATCAGTTTTCAATGTATGGCTAATTGACAGCGTGTGAGTTTGCATAATGAACTTTGAGGGTCTGAGAAAATGCAGTTATCATTCTTGCAGTTCAAACAACAGGAGTAAGCATTTTACTCCGTGTATTAGTTGCTAAGTTCCAAGACATAAGATGGCTGTAACTGATGCCCACATACAAGGAAGTTCTTCAAATTAGGTGCCTTACACTTCTGTGTATATATTAAAACAATGACTGATTTCTCTAACTGAATTTCCTCTCATTTAGAGTAAATTCTGTTGTGCTTAGAAAGTTCACCAACCTAGCCAATTTTTTATTTTTAATTTTGGAATTTTTATTTCTTTTGACTGAAAACACATTAGCACTGATGGAAGACTTCTAAAAGTTTTAAGATTTACCCCATTAAGTCATTAGTTTTAAATAAATGGCTAAAAAATGACAGTTAAAAAAATTAAGTTTCTGAATTTCTTATCCACATTTGATGTGGATAAGATGTGACGTCGTTTAGATGTCAAAGGCTCAGCCCAGTCAATAATCTTAAATTAATCACTGCCTTCAAGGATGTGTGACAACTTTAAAATAACTATATAATATGGAAGCCCATGTCAATACCAATATATTGGATGTAACTTGAATTCTTAGTCATACAATTAACTAATCAGAGAAGAATTTCCAGTAGACACAAACTAATTTTTGTGAGGTTAAAAAAGTTCTTTTTACTGATTTTATTACTTTTTTTAAAACTTGAGTTTATTCTTAGTGAATAAACAAACCCATACAACTAAAACTCAAAAATGGCAGTCACCTAAGTGTTGAAAAAACTATACTTGCCTTATGAAGAGTTGTTTTGGCAATAGTTACAGTCATCTGTAAAAATGAATAGTGTAAAGGCAAACATATGAATAGTGTATCTGCAAACAAAAGACAAGTCAGACCCTGGGCTTCTAAATTCTGTTCTTGGTAGCTTCCCCCTCACCTTGTCCCATGCGCTCTTCGTGTGCAGTTAGGAAAATGACATCTAGGAGAGCGTTAGAGAAAGTTAACGTTTTAGGAAGACTTATTCAGAAAAAAAACACTAGAACGCGCTCCTTCTTGCCTCCAGTCTACAAAAGAAGATCCCTTTGCTAAACAGCTCCCTTGAGGATATGATTCTACAGGTCACTGAACAATGAGTTCAGTGAGTTCAAGGGGAGATCTTTGAACAAACTGGAATATTAATCTCTTTACAATGTATATACAGTATAAACTACCTCACTTGTCTTTCCTTGGGGGGGGGAATGACGGACGTTAACAATTTTTGTTACAAATGGTCCCTGATCTTATTATTTAAGTCACTTCAGTTAGCTTTCAATGTACATTTAATAATATGCATTTAATGATGTAAAATATTTTTAGCAAAAGCTTTAAAACCAAAAATACTCTGTAACTGTGATGTGTGTTGTAGAGGCCGAGAGAATCTGTCCTTTAGTCATCGTCTTGTGTGTTTAACCCTGTGGAGTCACAGGTTTTCAAATGTAGGAATTCACTTCATCAAATTTCACGCATTTTCAGCTGTTTTCCCCACATTGCACTTGACTGAAAGTCACGTGAGATTAAAGTGCCCCTTCTTTCTATGAAACATATTTCAACTGTTTTTCATAAATGTATTACACATCTGAAAGGAATATATATTCTGGGACTCTAGTTTTCTATTTTCTGTCTGGCACTTTCAGCTGTTTTTTTTTTTTTTTCATAAACATGTCACTTAATAAAAAATAATATGACATGGATTAAAATGTTCAAACATTTTTCAACAGTTGTACACACACACACCACCTTAATTTAAAAATGACATCTTTTCTTTCAGGTATTTTCCAGCTGTTCTTGGAAATGATGTGATTTGATTGAAAAGTCATGTTGTCCCTAGGATGCCAATTTTTATGTTGTCTCCCATCTCAAGAGTTAATGTTCTTTCATCCCATCAGTTTCATTGCCAAGTATAATATGTATGTTGCATTTTATTCATAAAAATAAAGAGGAAAAAACCAAAAGCATCATCATGAGATGTCTTATGTTCAACTAGTCCGAAGACACCATGGTGCGCTGGTGAAAGAAAAGGAGCCTTACAGTCAGAAGGTTTGTGTTTTGAGCCCAGTCTTTGCCATCTATCATAAATGGTGATGTTATAGGCACTGGGGTAATGGTGGATGTTTGTGCAAAGCTATTTACTAAACTTGTTTGAGTTAGTGCCTTTTAATATGTGCTTTTGAAAATATATATATAGTTTCAAT EMBV3_33613 GCTACTTTGTGTGCTTTAAACAAATACCTTGGGTTGATGTCTCATCAGCCTAGTGCTAGG Gene BVV0102_061652 + 0 NULL GK000016.2:19673181-20594966 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28806 AGGGGAGGTGAGGGAGCGGGGTGACTACAATAGCAAACTTCTGATGAGTAACTGGCATTA Gene BVT0102_247108 - 1 EMBV3_24738 GK000003.2:90041689-90055298 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173989 TCONS_00173992 TCONS_00173994 TCONS_00173996 TCONS_00173990 TCONS_00173993 TCONS_00173995 TCONS_00173991 1 XLOC_104491 Coding TCONS_00173990 XLOC_104491 Coding Coding PRKAA2 3:90053955-90102954 j TSS129214 2938 1 TCONS_00173990_3 462 9 0.940222049879587 0.000170233691091149 0.00120734271115155 6.53464960110077e-05 2.02515553855378e-08 3.30577156823735e-12 4.17120621844087e-16 8.4463878300223e-12 0.00132343012008309 0.00192419674944663 1.63661119060016e-07 2.13767296631587e-23 1.60602627068361e-11 8.26455359746189e-11 0.00114459310508024 0.000102044328883393 0.000276933887949556 1.31759371525027e-12 6.1950882722237e-11 3.62061535993627e-18 0.000217611295819427 1.56101940021704e-08 1.64624050754221e-05 1.269113146589e-12 1.21572915376155e-05 1.56744301358981e-12 0.000399746261919167 8.80703631773805e-11 1.66087766686078e-12 2.08901737758664e-05 3.1913819932426e-23 NM_001205605.1 PRKAA2 Bos taurus protein kinase, AMP-activated, alpha 2 catalytic subunit (PRKAA2), mRNA. 0.0 2825 100.00 0.532675289312457 NM_006252.3 PRKAA2 Homo sapiens protein kinase, AMP-activated, alpha 2 catalytic subunit (PRKAA2), mRNA. 0.0 3171 83.71 0.989788972089857 TCONS_00173990_3 sp|P54646|AAPK2_HUMAN AAPK2_HUMAN 5'-AMP-activated protein kinase catalytic subunit alpha-2; 0.0 950 98.05 0.997835497835498 3 coding 1 1 1 1 0.00177573071072445 0.98832653630208 -0.0301018233986602 0.780675282882391 AATGCTGGGTGTAAAAGGATAAACATGCAATTGGAGAGCATCAATTGACAGGCCATAAAGTTGCAGTTAAAATTTTAAATAGACAGAAGATTCGCAGTTTAGATGTTGTTGGAAAAATAAAACGAGAAATTCAAAATCTAAAACTCTTTCGTCATCCTCATATTATCAAACTATACCAGGTGATCAGCACTCCAACAGATTTTTTTATGGTAATGGAATATGTGTCTGGTGGTGAATTGTTTGACTACATCTGTAAACATGGACGGGTTGAAGAGATGGAAGCTCGGCGGCTGTTTCAGCAGATTCTGTCTGCCGTGGATTACTGTCACAGGCACATGGTTGTTCATCGAGACCTGAAACCAGAGAATGTGCTATTGGACGCACAGATGAATGCCAAGATAGCTGATTTTGGATTATCTAACATGATGTCAGATGGTGAATTTCTGCGAACTAGCTGCGGATCCCCAAATTATGCAGCACCTGAAGTCATCTCAGGCAGGCTGTATGCAGGTCCTGAAGTGGATATCTGGAGCTGCGGTGTTATTTTGTATGCTCTTCTTTGTGGCACCCTCCCATTTGATGATGAGCATGTGCCTACGCTGTTTAAGAAGATCCGAGGGGGTGTTTTTTACATCCCAGAATATCTCAATCGTTCTGTTGCTACTCTCCTGATGCATATGCTGCAGGTTGATCCCCTGAAACGAGCAACTATCAAAGACATAAGAGAGCATGAATGGTTTAAACAAGATTTGCCCAGTTACTTATTTCCTGAAGACCCCTCCTATGATGCTAACGTCATTGATGATGAGGCTGTGAAAGAAGTGTGTGAAAAATTTGAGTGTACAGAATCAGAAGTAATGAACAGTTTATATAGTGGTGACCCTCAAGACCAGCTTGCAGTGGCTTATCATCTTATCATTGACAATCGGAGAATAATGAACCAAGCCAGTGAGTTCTACCTCGCCTCTAGTCCCCCAACTGGTTCTTTTATGGATGATAGTACCATGCATATTCCCCCAGGCCTGAAACCTCATCCGGAAAGGATGCCACCTCTTATAGCAGACAGCCCTAAAGCACGATGTCCACTGGATGCACTGAATACAACGAAGCCCAAATCTTTAGCTGTGAAAAAAGCCAAGTGGCATCTTGGAATCCGAAGTCAAAGCAAACCATATGACATTATGGCTGAAGTTTACCGAGCTATGAAGCAGCTGGATTTTGAATGGAAGGTAGTGAATGCATACCATCTACGTGTAAGAAGAAGAAATCCAGTGACTGGCAATTATGTGAAAATGAGCTTACAGCTGTACCTGGTTGACAACAGAAGCTATCTTTTGGACTTTAAAAGCATTGATGATGAGGTGGTGGAGCAGAGGTCTGGTTCCTCAACACCTCAGCGGTCCTGTTCTGCTGCTGGCTTACACAGACCACGGTCCAGTTTGGATTCTGTAACTGCGGAGGGCCATTCACTCTCTGGCTCTCTCACGGGCTCTTTGACCGGAAGCATGTCGTCCTCTGTCTCACCTCGCCTGGGCAGTCACACCATGGATTTTTTTGAAATGTGTGCCAGTCTGATCACTACTTTAGCACGCTGATGATCTTTCCCTAGTTTTTTTTCTTTCTGTTATTGCACTGTGAAAATCAGATATATTCTTTAAATTATTATTTTACTTATGGATATCACATATTCTGAAGTACTGGTTGAGAGCCGTGACTGTCTTCAGGGGACACAGTACCATTGAAATTTACTGAAAAGAAAAAGTCTGACATCTTATTTACTGTAGACATCTGTAATTCTGTTTTGCCTATTATAAATTCACATAGGCAGTATCTTTAATATGTGAACACTCATGATTATTGTTAACCTGAAATTGTGGACTCACTACAGATGATTAATATACCTTTACTGGTGAACCATCTCAGTCAACAGGTGGTTTGGCAACATCTTGCTTTACTGTTTAGTGTAGGTAAATCCAGTTTGCTTCCTAAATTTCAGCAGGTTTTAAGCTGTGTTTATGCACAAGATTTAAAAATAACATATATATTAGTAAGATAGTATTTAAATGTTGAAATCTTAAGAGCCAGATCCCCCTCCCCCAAATTTTAGAACCAAATTCTAGCAGTTTCTGCAGATATTGCCCAGTGTTCAACAGAAGGACTGTGGTCCTGAGACAGGTAATGGTCATTTCCAAGTTCCTTCAAAACAGCTATAACCAACCAGAGGCTCTATCTTGAGATTTTCCTGAATAACATATATAAGAGCCTTCAAGGTTCTACTCAGTACTGGAACATCTGGAGTTACAACTTTTGTCTTTTTCATAAACTTGTATCATTTTACAACATGCCTTCAAAGTCTACCTTTCTCAAGTTCTTTTTCACTGTATTTATTTTTGTACTCCACCAAGCATGATAAAATAGTTAAAAGAAACAAAGCAAAATGTCAACAGTCCCTTAGAGAGAACTCTTATCTCTGGTCTCTTCCTGTGTGTAGTGGTAAGGAGTGTGTGTGTGCCTGTCCTTTTGCATCCTGTAATGCCAGTTACTCATCAGAAGTTTGCTATTGTAGTCACCCCGCTCCCTCACCTCCCCTGATCACCTTTGTCTTTGTTTATTGTTTGATCCTTAGTGGCTGATGGGCTTAGTTTTGAAATCTTCTCTGGTTCTCTTTCTTTGTTCTACATCTTGGTTGCTAGCCATCCAATTTGAAACACTGTTCTGGCCCTAAGGGCTTTTCTATACTTCCAAAGCTTGGTAGGCTTGTGACCTTCACTGTTGAACCTGTTAGGGCAGGGAAGCCTTAAACATTCAAAAAAATTCTCTCTTGAATAAATATGTATGTTGTTTACATATATACATATATGTATTTGTATACCAGTGCTTTTAAAGGAAAACCAAACTTTTATTTTTGGCTTTGTGCAAGTTTTTTTCAGGCTTAAAA EMBV3_41271 CATGTGTCTAGATTCCTAAAACAGGAGGCAGCAAAGCTGTCCCGTAAAGGGCCCGGTAGT Gene GeneID:512243|ZSWIM1:NM_001103242:1000_cdna Constitutive 0 NULL GeneID:512243 13 GENE ZSWIM1 MGC140159 zinc finger, SWIM-type containing 1 EMBV3_08366 GAACGCCAGTGTTCATGGAAATCAGTCACCTGAAATAATGGACTCAGGGAAGTGCGTTTC Gene GeneID:767824|CMC1:NM_001076548:238_cdna Constitutive 2 NULL GeneID:767824 22 GENE CMC1 MGC126984 COX assembly mitochondrial protein homolog (S. cerevisiae) EMBV3_26075 AACTGTTAAAGAAAACTTCCACACCAGTAGCTTCAATGTTGCTTTGTGGCACGTATGGTC Variant GeneID:513824|TMEM128:NM_001034454:22_cdna 276^434 1 EMBV3_08672 GeneID:513824 6 GENE TMEM128 MGC127281 transmembrane protein 128 EMBV3_08735 TCACAAGCCCTGCTGTCAGCTGTAGGTAACTTCCTGTTGAACTCCTGTCCCACTGTGCAC Gene BVT0101_012554 + 0 NULL GK000005.2:34699249-35059696 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194650 TCONS_00194654 TCONS_00194657 TCONS_00194658 TCONS_00194652 TCONS_00194653 TCONS_00194659 TCONS_00194655 TCONS_00194651 TCONS_00194660 TCONS_00194656 1 XLOC_117818 Coding TCONS_00194658 XLOC_117818 Coding Coding ANO6 5:35056793-35291798 j TSS145227 5775 1 TCONS_00194658_7 544 19 0.975506799884257 0.000574653482578618 0.000169461457984144 8.71183298967286e-09 0.000306855868416972 0.000149082093840719 5.2826451365833e-05 8.06914195672234e-05 7.50811912826994e-56 2.20216383365683e-08 2.18427496558218e-10 1.32632526501537e-07 0.000120830772059961 2.61132640878298e-13 7.79112458972982e-32 7.27613672686035e-09 0.00943979149660194 0.00149249859151887 0.00282568578023371 1.94529068266701e-06 2.91316886322797e-08 7.70548731497188e-05 0.00314673144852298 0.0028610155417188 0.00512327322332216 0.000818703410026458 0.000367166126279734 0.000193635504596139 0.000691368294777009 0.000382244561719491 0.00153934446737426 XM_005206409.1 ANO6 PREDICTED: Bos taurus anoctamin 6 (ANO6), transcript variant X2, 0.0 8172 100.00 0.784415584415584 XM_005268706.1 ANO6 PREDICTED: Homo sapiens anoctamin 6 (ANO6), transcript variant X1, 0.0 2684 85.51 0.404155844155844 TCONS_00194658_7 sp|Q4KMQ2|ANO6_HUMAN ANO6_HUMAN Anoctamin-6; 0.0 997 90.26 0.996323529411765 1 coding 0 0 0 0 -0.170540937991583 0.249944447956669 0.00773615391900292 0.894997514558705 GCGAGCCACGGCGCTCACTGGGCATGCTCAGTGGCCCGGACGGCTCCGGCAGCCAGAGGTTGTCTTGGACGCACCACTCGGGTCCGGATTCACCGAGAGCGGAGTGAGCACAGCGGCCCCTGAGCCGGGAGTGAGACGCGCCCTGCCGTCCCTGCCAGGGCGCCCGCCGGGTCAGAGAGCCGAAGTTCCGGACTCCAAGGAGCCCCCAACTTCGCGCCAAGTTTCGAGCTGCGGGGGGAGACATGCCCATGATGACCAGGGACGTTCTGCTAGAAATGGAGCTGGAGGAGGACGACGAAGAAGATGGGGATATCGCCTTGGAAAACCTTGAACAGACAAATGTCTCTGGTTTTGGATCATTGAAAAGTCAGCAGGACTTCCGAACCCCAGAGTTTGAAGAATTTAATGGAAAACCTGACTCCCTCTATTTCAATGATGGTCAGCGAAGAATTGACTTTGTTCTAGTGTATGAAGATGAAAGTAGAAAAGAGACCAATAAAAAGGGTTCAAATGAAAAACAAAGAAGAAAAAGACAAGCATATGAATCTAACCTCATCTGTGATGGTCTGCAGCTAGAAGCAACCAGATCCCTTGTGGATGACAAGCTCGTATTTGTAAAAGTCCATGCCCCATGGGAGGTGCTGTGTACCTACGCAGAGATAATGCACATCAAATTGCCTCTGAAACCCAATGATCTGAAAACCCGGTCCTCAGCCTTTGATAATTTCAACTGGTTTACCAAACTCCTCCAAGTGGATGAAAGTATCATCAAGCCAGAGCAAGAGTTTTTCACTGCCCCGTTTGAGAAGAACCGCATGAATGACTTTTACATTCAAGATAGAGACACATTCTTCAATCCAGCCACCAGAAGCCGCATTGTTTACTTCATTCTTTCTCGGATAATGTACCAAGTAAGGGACAATGTTAAAAAGTTTGGGATTAACAAACTCGTAAACTCTGGAATCTACAAGGCCGCTTTCCCTCTCCATGATTGCAACTTCAGCACCCCATCGGAGGACCTCAGCTGCCCCAATGAGCGGTACCTTCTGTACAGGGAATGGGCTCATCCTCGAAGCATATACAAAAAGCAGCCCTTGGATCTTATCAGGAAATATTATGGAGAGAAGATTGGGATCTATTTTGCCTGGCTGGGCTATTACACTCAGATGCTTCTCCTGGCAGCCATCGTGGGAGTGGCTTGCTTTCTCTATGGATATTTTACTGAGGATAACTGTACATGGAGAAATTGTGCATCTTTGACAGTTTTGGAACCCTAGTCTTTGCAGTATTTATGGGGGTGTGGGTAACCTTGTTTTTGGAGTTTTGGAAGCGGCGCCAGGCAGAACTGGAGTACGAATGGGACACCGTTGAGTTGCAGCAGGAAGAGCAAGCCCGACCAGAATACGAGGCACGGTGCACTCACGTGGTGATCAATGAGATCACTCAGGAAGAAGAGCGTGTTCCCTTTACCACATGGGGAAAGTGTATACGTGTAACCCTCTGTGCCAGTGCTGTCTTTTTCTGGATCCTGTTGATCATTGCTTCCGTTATTGGGATCATTGTCTACAGGCTCTCAGTGTTCGTTATATTTTCTGTAAACCTTCGCAAGATCTCTAATGGAACAGACCCAATCCAGAAGTATGTAACTCCACAGATGGCCACATCCATCACTGCTTCCCTCATCAGCTTTATCATCATCATGATTCTGAACACTATATATGAGAAAGTGGCAATCATGATTACTAACTTTGAACTCCCAAGGACCCAGACTGATTATGAGAACAGCTTAACCATGAAGATGTTCTTATTCCAGTTTGTCAACTACTACTCTTCGTGTTTCTACATCGCATTCTTTAAGGGCAAATTTGTGGGTTATCCAGGAGATCCAGTTTATTGGCTGGGAAAATACAGAAATGAAGAGTGTGACCCAGGTGGGTGTCTACTTGAACTGACAACGCAGCTGATAATCATCATGGGAGGAAAAGCAATCTGGAATAACATACAAGAAGTGTTACTTCCCTGGGTCATGAACGTGTTTGGACGGTGTCGCACCGTTTCAGGAGCAGAAAAGAGAACCCCACGATGGGAACAAGACTACCATCTGCAGCCCATGGGCAAACTGGGGTTATTTTATGAATATCTTGAAATGATTATTCAGTTTGGGTTCGTCACCTTATTTGTGGCCTCTTTTCCACTGGCCCCTCTGTTGGCTCTGGTGAACAATATATTGGAAATAAGAGTGGACGCGTGGAAACTGACTACCCAGTATAGACGCATGGTGCCAGAAAAAGCCCAGGACATCGGAGCATGGCAGCCCATCATGCAAGGAATAGCAATTCTGGCTGTGGTGACCAATGCCATGATCATTGCATTCACATCAGACATGATCCCCCGCCTGGTGTATTACTGGTCCTTCTCCATCCCGCCATATGGGGACCACCCAGACTACTCAATGGAAGGATACATCAACATAAGCCTCTCCATCTTCAATACTGCCGACTTCAAAAGCAGAGTCAAGGAAAACCCATACGCTGGGTCTAAATATGACACGTGCAGGTATCGTGATTTCCGGTACCCTCCTGGACACCCACAAGAGTATAAACACAACATCTATTATTGGCATGTGATTGCAGCCAAGCTGGCTTTTATCATTGTCATGGAGCATATCATCTATTCTGTGAAGTTCTTCATTTCATATACAATTCCAGATGTATCAAAAAGCACGAAGAGCAAGATCAAGAGAGAAAAATACCTAACCCAGAAGCTTCTTCATGAGAATCACCTCAAAGACATGACCAAAAATATAGGAGTCATAGCTGAGAAGATGATAGGAGCAGTCGTAGATAACAATTTACGACCAAAATCCGATTAAGAGCTTTATGTTCTGAGAAGCACTTTAAAGAATTTAGCTCTGTCAAAATTTACTATGAATCACTAATGAGAATGTTTAAGTTAAATCACTTTGGCAAATAGGAGTCTTAACTATCGCCATTTTCATGCAGATTATTTTTCAGTTTCAGCTAGTGATGCAGGAACTGGAAAATGTAAAATTGAGTTGAAGAAGGGCATAAAACTAATCACCAGAAAGACCAAAAATGTTACTTTTTGGGATAAATTGGAATTTTAATCATACACAGGAATTCTCTTCATGTGCTTAAAGAAACAACATCTAGCAAAGCAGAGTGGAGTTTTTTCCTCATCTGATTATTTTCATTCCTTTCTGTTCTGAAGCACATGATCTTTTTTTATTTTTAGGCACTGTTTTGTTTCTTCACTCTTGCTAGACCTGTTCCAGAGTTATCCTTCCATTACAGTACCATCATTAAAGGCTAGACATGCTAGCTCTTGTGTGATTAAAAATATCTAACACAGAATTCAGTTTGAATGCTGTATTAAGTTGCAGATAGACCCAAGACTTTACAATATTTAGGTGTATTATCATGTTCCTATAGAAAAGGAAACCTCAGGTAATAAGAGGAAATAGTTTCAGTCTTCATCTTGGCCTATCTTTCCGTCTCAGAGAAATACTCTTAATGGATTGAAATGAAGATTGCATTTCTGAGCATATTTGTGCTATTGATCAGGATGATTAATTTACATCCAAAGATACATCGTATCTTGAAAAAAATGAAATCAAGTGATTAAAATTACATATTTATCAACATAATGGTTTGGAAAAGATGAGCCTATCGAGTTGCCACCAGTTGTCCTTTACTGTTAGATCTAGGAAGTACAGTATTGCAAGGACCCTTGTGATTGGCTCACAGCCACCGTAACAGCACAGTGCTGCGCACGTCAAGAGAACAGCAGGTCTCCTCGGTGTGACCTCACCGTGTTCCTAAGAGGGGTTCTGCACACCCTGGTGATCAGCCTGCCAAAGCATCTGCCATAGAGAAGGTAGCTCAGCACATCCTCCCTTCTCTCACTGTCTGCCCAGTAACTTGTTTGTAATTGCATGTTTGCACCCAGGGAGTGTTTTTAGGGAGGGAGACGGAGAAACGGGGGGATACCCAGATTATTCCCAAACAAGAAAAGAGACTGGATTTGATTTGAATTTTCAGCCTCCTATCGAGCCAATCAGGCAATTAAGGGTCAAAAAAAACCAATTGGTTTGGTCACAAGCCCTGCTGTCAGCTGTAGGTAACTTCCTGTTGAACTCCTGTCCCACTGTGCACATCTTGCCCTCGGTTTATTCAGTTCAGCACACTTTACTGCACTTTACTGCCTTTTGGATGCCTAGCCCTCTATAGGCTCTAGAGAAGACACAGGGCCTGTACCCCTCACCAGTTACTGGTGACAGAGCAGAGCTGGGTGCAGAGAGAGCGTCTGGCACCCCGCTCTCTCTAAATGGGCCACTCGCCACCCATTACGATGCTGCTCAATGCCCAGGTGCCACAGGAGCCGAGGCACTTAGAATCCCAGCAGCGAAGAACAAGGAAACACTTTTCAGTGAGCAAATTGACGGGCTTGCTATAATAGCTGCTATGGCAGCTTCACTCCAGGTCATAGTTCTAAATGCCTGCCATGAATGTTAACAAACCACGGGGGTAAAAAAGTATTAATGTAGGATTCAGCGAAACAGTATTCTGGACTTTTGAATTGTCCCAGTGGATCAGGATCATTTCACTAACTTTCTTGATAATGTTAAGGGTATGTGTGATCAAAGAGTGCTCGTGACAGGCCACATGAGGTCTAGTCACAGACGGAGCGAGAAATGCATTTCTTCCCAGCGGGGAAGCATTCTCGTCCCTTCCCTGCTCACCTGGGACGCTGCTCCTGAAAGTGGTGCCTCTTCCTCTCGTATTACCTCTTCTCTTCTCTGAAGTGTAGGACTATCTCCTAGTGTTGGATTTGGCAGTTACTCGCTGTGTGTGGAACTATAAACAAGGAAATGTTCTTGCCTTATCTCCTTGTATATAAAATAGAACTTGAATTGTGCATTTCTGTTTTCATAAATCGTCTTCATAGTTCAAAATGTGCTTCTGTGGACAGGAGGGAAAAAAACCTCTATGTGTTTAAAGGCAGCAAATGTGAAGTATGACACTGCCAATACTCCCCAGATGGCCAGGTTGCAATGGAGACCTAGGGTCATCTGTGACACCGACGCTGTTCATGTAAGTCTAGTGCTGACTTGCCGGTGATGAACATGTGGGGCTGTGCCTGCAGGCACTGGTGGGCTGGATCTGTAAATGCGAGCAGAGGCAGCCCCCTGGCAAAATGGAGGGGTGTGGCAGTGGACCCATGAAGGGAAAATCTGGCCCTAGACCTGCCCCATGTTAACCACTAGAGAAATTTTACTTTGTATCCTTTTGTGATGCCTGTGAATTTTAACAGATCAAAGCATTAGACCAAAATACTCAGGAGATTTTTCTCTAAATATCCCTGATATTTTAGTTATGTCAATAGGATGGGAAAGCTTTCGTTTTTGTTTGAAAACTAAACAAAACCATCTTGCAAACTGTTTATCACTGAAAGTCTTCCCTTATAATTGCACGTGCATCTTGAATTTCAGAAAACATTAATTCACAATAGGGGAGCAGGACATGCTCTTTGTTGAAACACTTCTTGTACCGTTTTCTTGTGTCCATATTATATTTTAAGATGTTTGAAAAGTTAAAATGTATGAACAGCTTAAGTAAAACTGAAATATTCATGATGCTTTTCATACACTGTGGCATAAGATGTAAAGTTTGTAATATTTTGCAAATTTCTGTGCATTTTAATATTCTTTTTATAATTATGAGCATTTTAATAAATTCATTTTTAAAACAATAC EMBV3_29222 AAGAACGACTTCATTGGCCAGAGCACCATCCCCTTGAAAAGCCTCAAGCAGGGATACCGA Gene GeneID:281986|PLCD1:NM_001081576:23_cdna Constitutive 1 NULL GeneID:281986 22 GENE PLCD1 NULL phospholipase C, delta 1 EMBV3_16307 AGCAATCCTCAGACACCTCACTCAGGACAGCTTGTAAAAATTAAAATGAATAAACTACGG Variant GeneID:512187|NUMB:NM_001101951:100_cdna 136^263 3 EMBV3_32932 GeneID:512187 10 GENE NUMB MGC159835 numb homolog (Drosophila) EMBV3_34285 CAACCTCTGAAAGTGAAGCAGCACTTTTCGGTGACAAACCTACAATCAAGCAACCAATGC Gene GeneID:527397|DEPDC1:XM_002686319:86_cdna Constitutive 0 NULL GeneID:527397 3 GENE DEPDC1 NULL DEP domain containing 1 EMBV3_13124 AGTTGCCTACAGAAGAGACCCAGAGAGGAAAACGGCCAACAGCTTTGTTGACTTATCTGC Gene BVT0102_008967 + 0 NULL GK000003.2:26817442-26825564 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169247 TCONS_00169242 TCONS_00169241 1 XLOC_103319 Coding TCONS_00169247 XLOC_103319 Coding Coding IGSF3 3:26783757-26820751 j TSS126773 4931 1 TCONS_00169247_5 518 0.066112350436017 5 0.866839672370448 0.000200608832797165 6.45547574127105e-05 0.00013166201549771 4.06526496897809e-05 1.93907366492622e-05 4.20606941261076e-05 5.08079953364639e-06 3.35858981002445e-05 0.000102955511942787 5.45197896540275e-05 0.000690199412659137 7.83125344114315e-05 1.20088299200647e-05 3.88236123953596e-101 1.39584831500457e-06 0.00471399791775913 0.00150740882415124 0.00363760172074767 6.0284439113186e-05 6.77485188909131e-06 3.05471502738927e-34 0.00149242374847176 0.00175817251815531 0.00213388685064304 0.000119539924262258 0.000114007772874234 7.05379709640106e-05 0.000832393998900424 0.000808745373020184 6.0728815435687e-31 XM_005204036.1 IGSF3 PREDICTED: Bos taurus immunoglobulin superfamily, member 3 (IGSF3), 0.0 8776 100.00 0.986615291016021 NM_001007237.2 IGSF3 Homo sapiens immunoglobulin superfamily, member 3 (IGSF3), 0.0 3232 82.77 0.644494017440681 TCONS_00169247_5 sp|O75054|IGSF3_HUMAN IGSF3_HUMAN Immunoglobulin superfamily member 3; 0.0 941 93.05 0.998069498069498 5 coding 0 0 0 0 NA NA NA NA GGGCCCTGTGCATCTGCATTTCTAACAAGCTCCCAGGCGACACGGATGCTGCCAGTCCACAGACATGACCAATTTGCAGGTGAGCAAATCAAAGCGGACCCTCACCCTGGTGGAAAACAGGCCCATCCAGCTGAACTGCTCAGTCAAGTCCCAGACCAGCCAGAACTCCCACTTCGCTGTGCTCTGGTATGTTCACAAGCCCTCGGACGCCGACGGCAAGCTCATCCTCAAAACCACCCACAACTCCGCCTTTGAGTATGGCACCTATGCCGAGGAGGAGGGCCTGAGAGCCAGGCTGCAGTTTGAGAGGCACATGTCCGGGGGTCTGTTCAGCCTCACTGTCCAGAGAGCCGAGGTCAGCGACAGCGGCAGCTACTACTGCCATGTGGAAGAGTGGCTGCTGAGCCCCAACTATGCCTGGTACAAGCTGGCAGAGGAGGTTTCAGGGCGCACAGAGGTCACTGTGAAGCGGCCAGATAGCCGCCTGAAGCTCAGCCAAGAGCAGGGCAACCTGTCGGTTCTGGAGACGCGGCAGGTGCAGCTGGAGTGCGTGGTCCTGAACCGCACGAGCGCAGCCTCACAGCTGCTGGTGGAATGGTTTGTGTGGAAGCCCAACCAGCCAGAGCGGGAGACTGTGGCCCGCCTGAGTCGCGATGCCACCTTCCACTACGGAGAGCAGGCAGCCAAGAACAACCTGAAGGGCCGGCTGCACTTGGAGAGCCCTTCCCCGGGCGTGTACCGGCTCTTCATCCAGAACGTGGCCGTGCAGGACAGCGGCACCTACAGCTGCCGTGTGGAGGAGTGGCTGCCCAGCCCCAGTGGCATGTGGTACAAACAGGCTGAGGACACCGCTGGCCAGATGGCTGTTCGCGTCACTCGACCAGATGCTGCCCTGCAGGTGGACACAGTGGTCCCGAATGCCACGGTGTTCGAGAAGGCAGCTTTCCAGCTGGACTGTAGCATCGTGTCTCGCTCCAGCCAGGACTCCCGCTTCGCCGTGGCCTGGTACTCCCTGAGGACTAAAGCTGGAGGAAAGAGGGGTAGCCCTGGCCCAGAAGATGGGGAGGAGGAAGAGGAGGAGGAAGTGGAGGTGGATGAAGAGGAGGACGAGGACCCCACAGAGCGGACAGCCCTGCTGAGCGTGGGTGCAGATGCTGTCTTTGGCCCAGAGGGTAGCCCCTGGGAGGGCAGGCTCCGCTTTCAGATGCTCTCCCCGCTCCTCTACCGGCTCACCGTGCTGCAGGCCAGCCCCCAGGACACGGGTAACTACTCCTGCCGTGTGGAGGAGTGGCTGCCCAGCCCTCAAAAGGAATGGTACCGGCTGACCGAGGAGGAGTCGGCCCCCATCGGCATCCGCGTTCTGGACACAAGTTCCACCCTGCAGTCCATCATCTGCTCCAACGACGCACTCTTCTACTTCGTCTTCTTCTACCCTTTCCCCATCTTTGGCATCCTTATCATCACCATCCTGCTGGTGCGCTTCAAGAGCCGGAACTCCAGCAAGAACTCCGAGGGGAAGAATGGGGTGCCCCTGTTGTGGATCAAGGAGCCACACCTCAACTACTCCCCCACTTGCCTGGAGCCCCCTGTGCTCAGTATCCACCCAGGAGCCATAGACTAAGGGGACTGCAGGTGACCATAAACCACGGAGGAGCTGAGGCTGTCCTCGCCGCATCTTGCTCTACCACCAGACAGCGGACAGCACCCGACCTCTGGGGCGCCCTCGCAGAACACAGTCGGACTTCAGAAGTGTTCAGAGTCGCCCATCTGTCAGAGGCAGACTGCCTCTAGGTGGCAGTCTTGGTCCGTTAGCTATTTTCGAGCAGATGGCACCATCCTGCCAGTTAGGTTTCTTGTTTTTGTTTTTGGTAATGTGGTGAGTAGCTCCCGGTGCCACGTCTACTCGCTGGTTTATATAGTATTCTCAGATATAGATGTTACAGGGGTTCTTATTCTTTGTAAGGGACTCTTTTTCAATCCCTTTGGTCTGCCCTTTTTGGATTCCATGATGTGGATGAATTTCTCTGAAATACAACTGATGGCAAAAGGAAGGACAGACTTTATAGTGCAAAGGACTCTCTTCCAAGGCTTTTTTCATTTTTGCACACTTGAAAATGCCACCCATGGATCAGAATATACTCCAACATTTTTTACTTCCTTAACGAGACTTGAAAATTATGTGTAGTATGGGCCCAATTTGTATGTTATCTTTTCCCTCAGCTGGAGTTGTTGGAACCACTTTGTAGTCAAGATGAAAGCATTGAATTTAGCTTCAAAAAACTGTGTATGTACAAGATAAATCCTGCGTATAAACCCCACTAGGAGTAGATAGTGCCCAGCCCAGCCTATCTGTCTGGGGGGGCAATAGGCTTCATCCTATCCTTGCCAAAAAATAAGCAGACTTGGTTGGAGAACAAGTCAGAAACTCTGAACAGTACACACTTTGCAAGTTAAAGTGGGCAGAAGGTTACTTTCAGCTACTGATTTTCAGATTGATCAAAGTCAGCAATTAGTGAAAGAAGGAAATAAGGCTGGTTGTTGGCTTGGTCTGTTCTGCAAGGGCAGTCTCTGATAACTGTTAGCAGGTGGGCTTCTGTTTCCAGGTGCTTTATCACACTCTTAAGGGCAAGTGGCCAGTGGGCCTGGAAAGGGGCCAGCAACTGAGCTGAACACACGGGGCTCAAGCAGCCACCACATACACCATAGGAAGGCACAGGGGCCGGCTGACAGCTTAGGTTCATGAACATTGGGACACTAGCCAGCCCTGGTTTCCAGAGCCTGGCGTTGGAGAACAGGGAGGAATAACTACCTCCCTGGAGGTATGAAGACTATGTTTTCCTTCTTCCTTCTGACTACATCTTTCTCAAAGATATTGATGTCTTTCTTCTTCACCATTTGACCTGCATCTCACTGCCATAAGAATATCTGCCCAGGGGAAGCCCAGACACAGCTCTTTGTAATCCTTATGGATTACCCCATCTCAGCAGGACGTGATCACATGCATGGACTTTGTACCCTTCCCTTTCTTAGATCTCATTTGTGGCTTTACGTGATTTGGTTGTTTATTGTTGACTTTTTATTTGGATGTCCCTTAAAGCCTGGTGAAGCCAATGTCACCTGTTATTTTTCACTTGTTGGGCAAGATCCTGGGCCCCGGAGCATCCTCAGTTGCAAGTGCTTCCTTTTGCTTGCTCCTGGAAGATGTTTTTTTTTTTTGCCTGGCTTCTTCATACTTTGCTGGCCACTTCTCTGGTAACTCAGACGGTAAAGTGTCTGCCTGCAACGCGGGAGACCCAGGTTCAGTCCCTGGATGGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAAAATTCTATGGACAGAGGAGCCTTGTAGGCTACAGTTCATGGGGTCACAAGGAGTCGGACACGACTGAGCGACTTCACTTCAGTTCCTCATACTTTGCTGTCCACAAGTGCCATCTCCCTTACTTATGAACTTGCAGCTTGAATCCCAAGGGAGAACCCACTTTGGAAAAAGTGTCTGGGAGATCTGGAACTAAGTCTAACCCAAGAGATTTGTATGGAACCCAATCCTGAGGCTGAACAGACGCCAGGGGAAGCTGTGGGATTCCAGGCCATGTGGACGCTGATCCTTACCTGGGTGCTTGGCAGGTGCTTTGATGTGTCATAGCCAAGGGAAAGCAACGCTGTTGCCTGGCTGTTTTCTGAAGGGCTTACACGGGCTGCGTTCCAGTCCTCTCCTGCAACTCTGTGTAGGCACCACCACCTTAATCCCACCGATGCCTCCCATGCTCATGCCCGTTTCTTGTGCTGCATCAATGCTCTAGGTACAGAACAGGCGCAGCGGTGAGGAAAGAAGATGGCCTTTGGCCCCATTTCTTCATGTCAGGGTATGGGCTTTTGGTGGGAAATTGCTGGCCCCTCATTTATAGACTGAGTCCACATGAGAAGATGATGTATTTTCCATCCATCTGAATGGAAAGATGCTGGAGGGCTGGCTGGAACTGGGACATGTAATGAAGATTTGAGTTTGAATAGGTTCACGGAAAAAAGAAAAGCCGGTGCTGCATATAAATAAGTGAAGCACTTGCCGGAGATTTGAAAGGAAAAAAGAAACCGAAGCCAGTATTTTAATAATTGTCTTTTTTTTTTTTAATTCCTGTGCATTTTCTGTTGGGCCAGGGGGTACCATCAACGGGTGAGCTCAAAGGGTGAGCTTTTCTGCTTTCTATGAAAATCCCAAGGACCTTCTTTCTTTGGCCATTTCTGTGGATATGTGGCATCTGCTGAGTGGTAATGCTGGCCTCCAGTGGCTGGGAGACCTCATTGCAAGTTGCCTACAGAAGAGACCCAGAGAGGAAAACGGCCAACAGCTCTGTTGACTTATCTGCATCTACAATATTGCATTAATAACAAACAACACTGTGCTAGGCCCATTCCAGGACATGGCTATGACCACACCCTTTCCCTAGGGGGTTTCTGTAGCAAGTTTTCATGTTTTTTTCAAACAATGGTTTCTCTGCGTTTACTGTTGAAGAAAAAAAAGTAGGGTAGACAGACTACCCGTGCATGATGTAGAGAGCTGTTGATTTGTTTTTTGTTTGTTTTTTTAAAAGAAAACTATTTGTAAGATGTTGCACTAAAATGTTTTATATACACTTCAGAGACCTGTAGTAAATTATGTTGAAAATATGGCTGTTTACATTGACTGAGTCCACTGTCGTCCTTTCTCGTCACTTAATCCGCCACTCTTGGCTATGAACTATGCCCTGGGGGCCTGGAGTTCTGCCCCTGACATTGGCTTGCTAAACTTAGGGTTTGTGAATTGTGGCCTTTATTATCACACCCCACCCCCAGCCCAAGTGGCACCTTTGTATACAGGATAATAAAGCAACCCTTCCTCAAGACA EMBV3_40676 TGTTGGAGGGCGGTACTTTACCACCACACGGAGCACTTTAGTGAATAAAGAACCCGACAG Variant GeneID:613717|KCTD9:NM_001102269:10_cdna 316^443 4 EMBV3_24630 GeneID:613717 8 GENE KCTD9 MGC159927 potassium channel tetramerisation domain containing 9 EMBV3_41833 TGCAAACATTGACTTTGGGGGCGGCGTGTTAAAGGTTAGAGGTTTTAGAGCCAGGACGCC Gene GeneID:100336641|LOC100336641:XM_002700430:7_cdna Constitutive 0 NULL GeneID:100336641 X GENE LOC100336641 NULL hypothetical protein LOC100336641 EMBV3_15485 TAGGGACCATGTTAGGGCTTCTGCAGTTTGACTCTGGCTTTATTTGCCTCTGTGCTCGTG Gene GeneID:539110|KBTBD7:XM_002691771:356_cdna Constitutive 0 NULL GeneID:539110 12 GENE KBTBD7 NULL kelch repeat and BTB (POZ) domain containing 7 EMBV3_08028 AGATGTCCCTCCTGCAAGAAGAGCTGCTGCTCCTGCTGCCCTGTGGGCTGTGCCAAGTGT Gene GeneID:404071|MT1A:NM_001040492:84_cdna Constitutive 0 NULL GeneID:404071 18 GENE MT1A MT-1A MT1E MT2A metallothionein 1E EMBV3_04504 CTTAACTGAACCAATGTAAAATTGCAGTTTCCTCAATAAGCATGTCCTGCTCCATTTACC Gene BVT0102_142914 + 0 NULL GK000006.2:37511146-37677098 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00207961 1 XLOC_126475 NonCoding TCONS_00207961 XLOC_126475 NonCoding NonCoding - 6:37625110-37627192 - TSS155468 2082 3 TCONS_00207961_8 94 0.0806916426512968 1 0 0.000607746983005424 0.000453675677069398 0.000320023702174401 0.00058631586282992 0.000452929781338434 6.87234774938502e-05 0.00018766792682658 5.39767806619628e-05 0.000128849509746829 0 0 0 3.85877328341633e-05 2.2593603844048e-06 0 0.000126856688095902 0 2.4102675113068e-05 0.000327203074461527 0.000535384792388468 1.45808219660085e-06 1.782101183655e-05 8.81272425779233e-05 0 2.66223656568355e-05 2.70718738559437e-05 9.28684381412362e-05 0 0 0 0 noncoding 0 0 0 0 0.326376585015968 0.451019886325473 NA NA GGCGGGGGCAGCCCATGGTGACAAGACCACCGCAGGCTCGGCGAGGGAACAGCGGCGTCGGTTTGTATCGGCGAAGATCCGACTGCAAGATACAGAGCATTAGCGCTGGAACTGGATTGCTTTTCACTGGCGGAGAAGGGAGGGACACTAATCAGCGGTTGGTTTTTCAGGTTCTGAGCTCTGAGTCTTAATATTTGTGCGGAGGTGGTAAGAAGCCTTGGGCATAGCGGGTAAAGCTAGAGGTGACAATTGAGGGTGCGTTGTTAAGCACTGTATTCCATCCACAATGGAGGAGTCTTGTTTCACTCGTCTTCGGAGGACTGGAGGAAGCGCCAAGCCGAAAGCCGGGCTGCGCAATGGGACAGGCGGGAAGGAGGTCGGCGCTTTCCTGGGAACCTCGCAGAGAGTTGGGGTGGAAGAGAAAAGCGGCGCAGCAACAGCAGCAACGGACTTGGGGAAGACTAGCGGGGTTGCTGAGAAGCATGAAAAGAAATCAGCGGGAGATCTGAGAGGCACTAAGTGGCCTAAAACCCAGTAATAGATAAAGAAGTTTGTCCTCCCCTACTTTCCCTGGCGCTGAATCTCAGAGCTTCCGTCTCCTCCCCAAGGTCACAGTGCTTTCCGAGTTACCCTGATCCTTGTCTGATCCACAGATAATCTTGTGAAGAAAACATTCTCATAAAAGTGACTTCATGATTCTACCGCACCACCTCCCATACCCCTAAATATGCAACACAGAACAGAAATACAGGGAAAGTACTATTTTAACTCAAAGGAATGACTTAACTCCTGGAAGAATTTTTGTAACCTACCATTTGAACTGGGAAGGTCCTGTGAGGCCAGATTCTTCCCAAGGACATTCAAATCAGGTCAGGTCTGCAGTTATCTTTGAGAATTAACTAGACTGACCAAGCAGAAAAGAAGTTTTGGGGAGTAATACATCCTGGGGATGGGGCACTGTTGGCTGGCATATAAGCTGTCACTGACATGTGGCAAGTTGTCATACGCTGCTGTGACAAGGCAAGAAAGCAAGATCGCAGTTACCAGGTAGCTAACTGTCATCTATGAAAATGATTCCCACCTTTGAAGTTTGAATCACACTGGATACCTTTTTAGAAACTCCAGGGACAAGATTAACACAATTCCCTTATGCTCCAGAGATGTGGCGGCTTCACAAAAGTCCAGGTCTCTTACAAAGACATAATCCCAATTCAGCGATGGTATCACCAAAAAGAATTGGAGGAATGGCAAAAAGAAATCACTGTGGGAAGGAGGTTTCCCCATGGTCGAGAAGGAAAGAATAAGAGTCTATTTTCATGTCCTGTATATGAGGTTTGTAGTAGCATTTAGGTCAATATCTCTGACTCGTGGTTTTTCATATGAAATTTTATCTTGAAAAAAAAGTTGGTTACCTGAGGCTCAAGTATGGAGTTGGGATAGTAGTCAGAATTACAAACTGAGGTACTATAAAGGTCCTTACCAAATAAACATCCAGAACCCTGGGAACTTACTTTTATAGAATAATCAGTGACTGTACACACTCCACTTCATTTTAATTTCTTAACTGAACCAATGTAAAATTGCAGTTTCCTCAATAAGCATGTCCTGCTCCATTTACCAAAATGGCTTTAAATGACCCCAGCAACAACAATAGTCCTAAGAGCAGATATTTAAACTGGCTTGAAGAGGTACCATGGTTTACTTTTTCTATTTCTGTAGCTCTGTCTTCCATCCATTTTTTTCTGACTTCCACATGTTCTCTACCAGATACACTCTACACTGAGCATCAAAATGGAACAGTCCCTATAGTCTTGGAGGGGGAGGCAAACATTAACCAAATAGTCATAATAAGAACTAGACAGTCACTAATCATAAGAAATTGTCCAAAAGAAAAACATTCATGTTAAACATATTTAACCCCAACAAGAACTGTAAACAGAATTGAGCTCCAGTTAATGCTATGTATGCTGAAGTATTTAGGAGGCAATATCTGATGTTGGCAACTTATTCTGAAAATATTTTTATTTTAAAAGATGGACTGACAGATGAATGAAGGGATGGATAGATATGTGATAAATCACG TCONS_00204940 TCONS_00204941 TCONS_00204942 TCONS_00204943 . 5' 209 TCONS_00204940 TCONS_00204941 TCONS_00204942 TCONS_00204943 . 5' 209 EMBV3_14728 AGGGCCTGTAAGTTTGCTGAATGGTGCTTAGATTATGGAGAACACGGATGCCGGACACCA Gene GeneID:540559|LANCL1:NM_001076227:41_cdna UTR3_Alt 2 NULL GeneID:540559 2 GENE LANCL1 MGC137731 LanC lantibiotic synthetase component C-like 1 (bacterial) EMBV3_14587 GGCTATACCAGTCCTCAGATATGAAATACAGAGAAGGATGAAAAGCAGCAGAAAAGAAAC Gene GeneID:768033|OSTC:NM_001077092:86_cdna Constitutive 1 NULL GeneID:768033 6 GENE OSTC DC2 MGC137612 oligosaccharyltransferase complex subunit EMBV3_27953 ACCCCACTCCGGCCCCCGGCCAAGCCGCCGGGATGAACACACTTGTTGGCTATGACCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04175 TTTGCTGGAATTGCTGTAGGTGCCGCTATGTGGTGGTGCTGGAGAATGAATTGATGTACG Variant GeneID:613610|PDHB:NM_001035435:268_cdna 334^619 1 EMBV3_33684 GeneID:613610 22 GENE PDHB NULL pyruvate dehydrogenase (lipoamide) beta EMBV3_14227 ACGGCGGAGTGCGGGATTTTTCTGCATTTTGTGTACCAACATTCGGCCAGGAGAGACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12993 CAGAGAGGTGAGGCAAATACTGAGGCCTGTGATCGTAAAAGTTGGGACCAAATGAGGCTC Gene GeneID:510177|SF3B1:XM_002685476:179_cdna UTR3_Alt 2 NULL GeneID:510177 2 GENE SF3B1 NULL splicing factor 3b, subunit 1, 155kDa EMBV3_28437 TCGGTACCAAGGTCAGAATGGCGGTTACACGAGAATGCTGCAGATCCCAAATCCGAATCA Gene GeneID:506989|MGC152194:NM_001075293:19_cdna Constitutive 0 NULL GeneID:506989 15 GENE MGC152194 NULL similar to mitochondrial ribosomal protein L17 EMBV3_03675 TTCCTGTTACTGGCATGTGCACGACTATGTTATTAGAAGCCACTTTATCGTTTTCCTGCT Gene GeneID:616217|RYBP:XM_002696972:140_cdna UTR3_Alt 2 NULL GeneID:616217 22 GENE RYBP NULL RING1 and YY1 binding protein EMBV3_08008 CTAGAGTCACAGCTCATCATTCCATATTCCCTCTGAGTTTCTCAAGCATTTTCGTTTCTG Gene BVT0102_348630 + 0 NULL GK000027.2:28189080-28322729 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25349 GTCCCCCAAATCCAGAAAACATTGCACCAGAGTTGCCACCCCATTTGGAGGTTTTGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41631 CGAAATCTAGTATTTCATGCTGGGAGTAAGACATAGGCCATGGAAAAATGTTCTCCAGGC Gene GeneID:280832|KIT:NM_001166484:77_cdna Constitutive 2 NULL GeneID:280832 6 GENE KIT c-kit v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog EMBV3_17052 TGCTTCCCGTTACGTGGGCTGTCGTGATTTGTAGTTTCCAAAGGTCTGTCCGCGTTTGCA Gene BVT0102_142298 + 0 NULL GK000025.2:3169186-3242291 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146006 TCONS_00146005 1 XLOC_088995 Coding TCONS_00146005 XLOC_088995 Coding Coding ADCY9 25:3232916-3344539 j TSS109279 13674 1 TCONS_00146005_2 1355 0.0245721807810443 11 0.877595814445181 1.71952297882405e-05 0.000147104477483773 0.000282946456432886 0.000901999258787335 0.000442832689910421 0.000958608236719475 0.000265798605937325 0.000416814190712484 0.00018989128260092 5.33293846621254e-09 0.000169226653842484 0.000163779902533137 7.96176594465888e-05 3.93133729589353e-06 0.000188334861200923 0.00121015326144358 0.000477968695256051 5.37762877797577e-05 0.000786615634777419 0.00124462730925225 0.000496592416826776 6.49650440609552e-08 0.000126744532695257 0.000263516427650437 0.00206800255883389 2.46058592267156e-07 6.82455064027267e-09 7.75810747737609e-05 9.64704858502606e-08 3.69491016130776e-05 XM_005224481.1 ADCY9 PREDICTED: Bos taurus adenylate cyclase 9 (ADCY9), transcript 0.0 8105 100.00 0.328579786456048 NM_001116.3 ADCY9 Homo sapiens adenylate cyclase 9 (ADCY9), mRNA. 0.0 5546 84.58 0.363097849934182 TCONS_00146005_2 sp|O60503|ADCY9_HUMAN ADCY9_HUMAN Adenylate cyclase type 9; 0.0 2449 91.28 0.997785977859779 1 coding 0 0 0 0 0.0981652681250689 0.520659269863796 -0.0259148308773124 0.590776408955406 GAGATCTGTGTTTGCGAGAGCGGCCCGCGGCGTGAGAAGGCTCGGCTGGACTTCCCTCAGGAGCGGGCTGCGGAGCAGGTCCCGGTGACCCCGGCCGGCAGGGTTCCGAGCTCGGCAACATGGCTTCCCCGCCCCACCAGCAGCTGCTGCAGCACCACAGCACCGAGGTGAGCTGTGACTCCAGCGGAGACAGCAACAGCGTGCGGGTCAGGATCAACCCCAAGCAGCCGTCCTCCAACAGCCACCCGAAGCACTGCAAGTACAGCATCTCCTCCAGCTGCAGCAGCTCCGGGGACTCCGGAGGGGTCCCCCGAAGAATGGGCGCAGGAGGCCGCCTGCGCAGGAGGAAGAAGCTGCCCCAGCTGTTCGAACGGGCCTCCAGCCGGTGGTGGGACCCCAAGTTTGACTCTGTGAACCTGGAGGAGGCTTGCATGGAGCGTTGCTTCCCGCAGACCCAGCGCCGCTTCCGGTATGCGCTCTTCTACATCGGCTTCGCCTGCCTTCTCTGGAGCATCTATTTTGGGGTCCACATGAAATCGAAACTGATTGTCATGGTAGCCCCTGCTCTGTGCTTCCTCGTGGTGTGTGTGGGCTTTTTTCTGTTTACCTTCACCAAGTTGTACGCCCGCCATTACGTGTGGACTTCGCTGGTTCTCACCCTCCTGGTATTCGCCCTGACCCTGGCTGCCCAGTTTCAGGTTTTGACGCCCCTCTCAGGACGAGTTGACAACTTCAATCATACTCGGGCTGCCAGGCCCACAGACACTTGCTTATCTCAAGTGGGGAGCTTTTCCATGTGCATCGAAGTGCTCTTTTTGCTCTACACCGTCATGCACTTACCTTTGTACTTGAGCTTGATTTTGGGAGTGGCCTATTCTGTTCTTTTTGAGACCTTTGGCTACCACTTCCAAGATGAAGCCTGCTTTGCCTCACCTGGAGCGGAGGCTCTGCACTGGGAGCTGCTGAGCCGGGCCCTGCTCCACCTCTGCATCCACGCCATCGGGATCCACCTGTTCATCATGTCCCAGGTGAGATCCAGGAGCACCTTCCTCAAGGTGGGCCAGTCTATTATGCACGGAAAGGATCTGGAAGTGGAAAAGGCCCTGAAAGAGAGGATGATTCATTCTGTGATGCCAAGAATCATAGCTGATGACTTGATGAAACAGGGGGATGAGGAGAGCGAGAATTCTGTCAAAAGGCACGCCACCTCCAGCCCCAAGAACAGGAAGAAGAAGTCTTCCATCCAGAAAGCCCCTATCGCCTTCCGCCCGTTTAAGATGCAGCAGATCGAAGAAGTCAGTATTTTATTTGCAGATATCGTGGGCTTCACCAAGATGAGTGCCAATAAGTCTGCCCACGCCCTGGTGGGTCTCCTCAACGATCTGTTCGGCCGCTTTGACCGGTTGTGTGAGGAGACCAAATGTGAGAAAATCAGCACCTTGGGAGACTGCTACTATTGTGTGGCTGGGTGTCCTGAGCCAAGGGCCGACCATGCCTACTGCTGCATCGAGATGGGGTTGGGCATGATAAGAGCCATTGAGCAGTTCTGCCAAGAGAAGAAAGAGATGGTGAACATGCGCGTTGGGGTTCACACAGGGACCGTCCTGTGTGGCATCTTGGGCATGAGGAGGTTTAAATTTGACGTGTGGTCCAATGATGTGAACTTGGCCAATCTCATGGAGCAGCTGGGAGTGGCTGGCAAGGTTCACATTTCCGAGGCCACTGCAAAATACCTAGATGACCGGTACGAAATGGAGGATGGGAAAGTTACTGAACGCCTTGGCCAGAGTGTTGTTGCTGACCAGTTGAAAGGTTTGAAGACATACCTGATAGCGGGTCAGAGAGCGAAGGAGTCTCACTGCAGCTGTTCAGAGGCCTTACTTTCTGGCTTTGAGGTCCTTGACGGCTCGCGGGTGTCCTCAGGCCCTAGGGGACAGGGGACAGCGTCGCCAGGGAGTGTCAGTGACTTGGCGCAGACTGTCAAAACCTTTGATAACCTTAAGACCTGCCCATCGTGCGGAATCACGTTCACTCCCAAGCCAGAAGCTGGTGCAGAAGGTGGAGCGGTCCAGAACGGCTGTCAGGAGGAGCCCAAGAACAGCGCCAAGGCCTCCGGAGGACCCAGCTCCAAAACGCAAAATGGACTTCTGAGTCCTCCCCCGGAGGAGAAGCTCACCAACAGTCAGACCTCCCTGTGCGAGATCTTACAGGAGAAGGGCAGGTGGGCAGGCGTGAGCCTGGATCAGTCAGCTCTCCTTCCGCTGAGGTTCAAGAACATCCGGGAGAAAACGGATGCCCACTTTGTCGACGTTATCAAGGAAGACAGCCTGATGAAAGACTACTTTTTTAAGCCGCCCATTAACCAGTTCAGCTTGAACTTCCTGGATCCGGAGCTCGAGCGGGCCTACAGGACCAGCTATCAAGAAGAGCAGGTTGTAAAGAGCTCTCCCGTGAGGACTTTCGCCAGTGCCACCTTCAGCTCCCTCCTGGATGTGCTTCTGTCAACAACAGTGTTTCTGATTCTCTCCATCACCTGCTTCCTGAGGTACGGGGCCGCCTCCACGCCGCCCCCGCCGGCCGCCCTGGCAGTCTTCGGAGCGGCCCTGCTGCTGGAGATCCTGTCCCTCGTGGTCTCTGTCAGGATGGTGTTCTTCCTGGAGGACGTGATGACGTGCACGAAGCGCCTGCTGGAGTGGATAGCCGGCTGGCTCCCGCGCCATTTCATCGGGGCCATCCTGGTGTCTCTCCCCGCCCTGGCGGTGTATTCACACGTCACCTCTGAATTTGAAACAAACATACACTCCACCATGTTCACGGGCTCGGCCGTGCTGACCGCTGTGGTGCAATACTGCAACTTCTGCCAGCTCAGCTCCTGGATGCGGTCCTCCCTGGCCACTGTCGTCGGGGCCGGGCCCCTGCTGCTGCTGCTCTACGTCTCCCTGTGCCCGGACAGTTCCACTGTAATTTCACACCTTGATGCAGTACAGAATTTCAGCTCCACCAGGAAGCTGTGCAACGCCTCGCTGCCTCACGACGGCAGGAGCCCAGCCAGCCTGATCGGCCAGGAGGTGATTCTCGTCTTCTTCCTCCTGCTCCTGTTGGTCTGGTTCCTGAACCGAGAGTTCGAAGTCAGCTACCGCCTGCACTACCATGGGGACGTGGAGGCGGACCTGCACCGCACCAAGATCCAGAGCATGAGGGACCAGGCCGACTGGCTGCTGCGGAACATCATCCCCTACCACGTGGCCGAGCAGCTCAAGGTGTCCCAGACCTACTCCAAGAACCACGACAGCGGAGGCGTCATCTTCGCCAGCATCGTCAACTTCAGCGAGTTCTACGAGGAGAACTACGAGGGCGGCAAGGAGTGCTACAGGGTCCTCAACGAGCTGATCGGGGACTTTGACGAGCTCCTGAGCAAGCCGGACTACAGCAGCATCGAGAAGATCAAGACCATCGGGGCCACGTACATGGCCGCGTCCGGGCTGAACGCCACGCAGTGCCGCGACGGCAGCCACCCGCAGGAGCACCTGCAGATCCTCTTCGAGTTCGCCAAGGAGATGATGCGTGTGGTGGACGACTTCAACAACAACATGCTGTGGTTCAACTTCAAGCTCAGGGTGGGCTTCAACCACGGGCCCCTGACGGCGGGCGTCATCGGCACCACCAAGCTGCTGTATGACATCTGGGGGGACACGGTCAACATCGCCAGCAGGATGGACACCACGGGGGTGGAGTGCCGCATCCAGGTCAGCGAGGAGAGCTACCGCGTCCTGAGCAAGATGGGCTACGAGTTCGACTACCGAGGGACGGTGAACGTCAAGGGCAAAGGCCAAATGAAGACCTACCTGTACCCCAAGTGCACAGACAGTGGGTTGGTGCCACAGCACCAGCTGTCCATCTCACCCGACATCCGGGTCCAGGTGGATGGCAGCATCGGACGCTCCCCCACAGACGAGATAGCCAGCCTGGTGCCTTCCGTTCAGAACCCGGACCAGGTGCCCCCAGGTTCCGAGAACAACGCCCAGACCAGGGACGCTCACCCGTCTGCTAAGAGACCCTGGAAGGAGCCAGTCAGAGCCGAGGAAAGGTGTCGGTTCGGCAAAGCCATAGAGAAAAGCGACTGTGAAGAAGTGGGGATGGAGGAAGCCAACGAACTCACGAAGCTCAACGTCTCAGAGAGGGCGTGACGCGGCCCAGCCCGCCCGCGGTGCTCTGTCCGTCCAGGCGCCACCGTCCCCGTCCCCGGACGGCGTGTCGTGTGGTCACTGCAGCCCTAACCTCTGTGTGGATCACAGTCATTCAGGGTTCACTTTCATCCACCTCCTTCCCCTTCCCCCACTCGGTGTGACCGTCAGAAGCTTGGAGAACAAGTGCCTTCAGGGGCTGGCGCGCCTGGAGTCCAGGGAGGCGCAGCCAGCGTGTGGCGCTGGATGCTGGTGGACGTTAAAGCAGAAGCTGTGGTTAAAATAAGATTTTTATTGCTTTTTCTCACGAGACACTTTTTTTTTTTTTTTTTGCTAATATAATGTTTTTGAGGTTTTTTTTTTTTTTTCATGTATACATACTAGTGTTTTTTTCCAGTGACCTGACCTTTCTATGTAAACACATACACGCACACACACTTGTATTCATGAATATGAGACCAAGTGCCAGTAACTCACTGGGCTGGGTGCTGGGGGTGCAGGCTGAGGACCGCAAGCAGCCGGCAACCCCCTACCCGCACCCTCCAGGGCGATCGGGCCCTTGGGGGCTGTGGTTGCACCCACTGGCCCCCCACACCCAGCAGCTTTAGGGCTTCCTCCTCATGCAGGCCAAGATTCCAAACGCCAACCGGTCTCACAGCTTGTGAACCCAGGCCTCAGGTATCTAAAAGCCCTTTTCCATTCTGCCCCTGTCCTGAGGGGTCTTCCAGCTGGAGTGGAGGGGCTCGTCTTTGAAGGTGACTCGTCCCAGAGGGAAACGCAAAATAAACATCCGAGGGTTGCATTTATTTATTTATTTATTTATCAGGAACTGTGTGTGTCTCGGGGAGGGTTGCTGGGCTGTTCTCTCTAGCAAAAGGAACTAGGCTTGGAGTGAGGGGTAGGTCACAGCGGAAGGATGAAGATGGGGCCATCAGAGCTCCAGCCACACTGGGCCGTGCTGGAGCATCAGAGCTCCAGCCACACATGCCCAGTGGGCATTGCCCGTGCTCTGGGTCAGGGCACCCTCGGCCACCACTTTGAATGCAAAAGCTCTGCTCCTCCCCCTTGCCCATGGCAGGAGCTGGGTCAGAACGGCTCGGTGTGAAGCAGGTCTGGGCTGAGTACCAGGGCTGGCAGGCAATGCTTGGCCTCCACTTCCGGGAAGTTTCTCCAGCTTTTCCGTTCTCAGCCTGTGCAGCACTTGTCTGTGGCGGATCGGGCCTGGTGAGTGGATCCCAGTCCTCTTTAGGTGGAGCTCTTACACTGTCAGTAGGGGCAGGATCGTCTGGATGTAAATGAGGCATCGGAACCTGGGGAAGTACAGAAAACCCAAGGAACTGGCTTCTGTGCCCTTTGTTACTAATCCCGTAATCCCCCTTGTAACTGTTTTGCCACACTGAGTCTGAAGTTTATGTAGACTTGAACTCAGGCCAGAGTTGTCCTGTCACAGTCCCATGACACCTCCCTCTTAAGGTGGCTGCAGCGCATGCGGTAGGGGAGGGCTAGGTCCTTCCTTCTCTGTGTGAGGCCCTCACCGACGTGCCCTGTGCGTTTTCTCATCCCCAGCAAATCTCTGTGTAGCTTTTGCATCTGCACCAAGTCCCTTTATCACTCCTCTTTGCCAGACTTGCACAGAATCTGCCCTCCCTGGCACCATCAAGCATTGACTTGGATCAGCCAGCTCCCCAGTGACGTGCCTGGGATGGCCCCCAGCAGCGCAGTCATAAGCCAGGATCTCCACGTCCAGGGGGATTTGCCTTCAGGTTTTACTGTCAGACTGTTGGTCTTCCAATGCCGGAGAAAGGATGACTGTGACAATACCTCTTGCTTCTAAAGAATGTATTCTTATAAAATATCGCAGAATTTTTATTTTTTCTTAAAAACACTACCTGATGCTCTGCCTGTCCATCGGGGTTGTGGGCACATCAGGGGTTCCTTCCATCAGTATTAAGGTGTGTGTCATGTAAGGCCCTCACCCCCTGCCCCCCCACCCCTGGGCTCCAGGCTCTGCAGCTACCGTGGTGGCCAGGGGCTGCTGGGCCGTTGCTGAATTCTCTGCTGTTCTGCTCCACAAAGCTCATTTCTGTACATACTTCCTCCCTTGCAAACTCTTTTTTTTCCTTCCCCTCCTGCAAAGGTTGTGATTCCTAGGAAGCCAAGGGGCTGCAGATACAGGGATAGCGTGGTGACCCCCACTGGTCCAGTTCAGCATTGTGCAAATGGGATCCTTCAAAGGACAGTTTAAATTGTCTTTAAAAAACACCCCGAGCCTTCCTAAGCAACCAGTGCAGGTGTTCCCTCTGGGTGTTCCACTGGTGACTCGGGTCCCTCCCAGCCGCTGCTCAGAAGCGTACCTCAGCACAGAACCACAGAGTGTCCGCAGGGGCCGCACTGGGCCTCCGACACAGCCTGTTGCTGAAGTCAGACGGGCTTCTGAGCAGCAGGCTCAGGCGCTCCCGATTGGATTCAGTGGAGGCATCCTTCAGAGTGGCATACCTCCTGTGAACTTAGGGCAGGAAGCAATACTTCAGAATTGAATGTGTGTAAATATAGTTGCTTTGAGTTGCAATTGCTGTTTTCTTCTTGGCCTCAGGTCTGATCAAATTCTCCATGTACAAATCCATATAAACAAGCACACAGAATTGTATCCAATGCAGACAAACATAGAGCATCAGTTATGAAACCCTCACAGAGCCTGGAGGCTCCCCACGGCTCCGTGACCCTGACCGTGCTATGGAGACGCCCGCACATTTGCACTTGACACTGAGAGCCAAAGGGCCGCGTGCTTCCCGTTACGTGGGCTGTCGTGATTTGTAGTTTCCAAAGGTCTGTCCGCGTTTGCATTTCTAGGTTTTCGAGGTAAGCACTTTTTGGTGGTGGTTTCGGAAAATCACGTCATGCCTAGAATCTGAAATTAAATTCTTGAGAACCAACTGTTTGAGTTCTCCATCTTTCCTTTGTTCTACCCTTTTTAAATTGTTAGTCCTGATAATTTCAAAATGCACCCCACCCCCCACCGCCCCAAAACAATGAACATTAAACTACTCTAAAATCTCAACATTTGCTGCCTGGTACTTCCTCACTGACAAGACTGGGGCCACTTCCGAGATTAAAGCAGCCTCCTTGCCAGCCGTCTGTGGCTGAAGTAGGGCTTGAGGGTCTTTTACACTGTGACTTTGAAAACAAGGCAACTAAAAACCCTACTGTGTGTGTGTGTGTTAAATGACTGTATTTGCTATAGTAAACTTTTTTTGAGAAGTATCTATTTCTACATGGGACTTGTAACAGAAGCAGGTTACAGCACAAATTTTGCTTGTGACCATATCCTGATTTTATTAGGCCTCCTAAAGAGTTTCTCCCACAATATCTCAAGCAATTGACTGAGAAAATAAAGTCAGTTTTTTAAAAGGACATGCCCACATAGCCTCTCCCTTGCAGAGTTCTGGGAGGCCTGTGTCACGGGGAAGGTCACAAACCCAGTTCAGAATCTGTTTAAATTCAGAGTGTCTTTGCCAGAAAATACACATGCCATTTCACACGTCACAGGGGCTCACAGCACCTCCATACCTGGAGCCAAATGCTGGCTCTGCTGGGGGTTAGCACCTTCCCTGTGGTTTTTCCTGGCAGTATTTAGGTGCAACTGCAAAGCAAGGACCCTGTTGTCGACTCAGGGAAGCGGGGTGCAGACATGGCCCAGGCCTTGCTCCTCGGTTCAGAGGCACCCAGCGTCTAGGTGATCCTGGAACCTGTGAGGACAGCGCTCATTGACGAGGGTGCTCTTTCTCTGAGTCTGTACTGCAGGCATCTTCAGGAACTTTCCAGGAGGTGAGGGAACAGCAGTCTTTGTTGCGTTTCTCTCTTAGAAAGGACACCCCAAGGACTTTCCGAGGTTTCTCTAACAGTCTCGAAAGGCAACCTCTAATTCTCACAGCAAGCTCCAGGTCTTACCATTTGTGGTTTCGCTTTCACTTTCCTTTTCATCTATTCTATCCCTTTAAAAAAAAAAAAAAATAGCTTGCATTTTAGAGACAGTTCTGAAATAAGTGCGAAGAATTGACCTTACCGAAGTTGAGGGCTGACCTTTTCTCTGGTCTCTTGGGAAGTGATCTGTGAGCTCTCGGGATGTCCTGCCTGATACGTGTCTCTGGGTAACTGGGGGCCTTGGGTCACACTGGCTCGTCTGGTGGTGTGGTTTACTGTGGTGGTCATGTGGACCTTATGCTGGGGCTGGAGACAAGTTCTCTCTTTCAGCTGAAATCTCTCCACATGGCGGCTTTTCTCTGGTGGAAATCTGTCATGGTGGCCACTGGGTTGGATCCCAAGTGCCAGGGAGAGGAAGCGGACTGGGGCAGCAGATAGTGAGAGGAAGTGATTAAGAAAAAGTACACACTTGCACACCACATAGGCGTAAACTCAAAATCTCCCCAAGTGTCTATTTTTATACTCTTCCTTTGTAAAAATTGTTTTTTAAATAACATAACTCCAAAGAGTTATTAACTTTACATCAGCGTAACCCAAGCATGGGGAATTCTCACGTCCTTGCTGGGCCTGAAAGTCGGAAGGAAGAAGGAATTATGCAGTCAGACATTGAGCAATCTGAGCATTTCCTGAAATCTCAGTCATCAACAGCAGCAATTCCTAACCTTTTGGGGGGGCTTACAGAGCCTTTGATAATTTGATGAAAGCTGTGACTCCTTTCTCCAGAAAAAAAAAAATGCACATAAAAATAAACTCACTTCATGTTCCTCGATCTAAACCAAAATACCCGTGATCTACAATAACAGGCTGGATGGTGATTTTTCATTACAAGCATCTGCGGGTGAAGTTTCCACGCATTTCTGGACTCTCCATTGGAAATGTGAATAAACAGATGAATGCTGCTTGTTGACACATGCATTTCCAGTCCAACTATATTTTAGACTTTAATGTCTGAGTTACCTGAGTACATCTGAAGAGCCACTCAAAGAACTTTTCAGTATAAAGACGAAGCTCGTCAGTCTTTCCAGCAGATAAGTAACACTCAGACAGTATGCACTGAGTACCTGCCACATGCCAAAGCTCGCTCAGGTGGTGGCTGCCACTTGAGGCCATTTGAGGCGCCCCTGGGATCAGTCACTGCTTTTCCTGATGGCTCTCCCATTAGGAACCCCACAGGAAACGGAAAAGAATTCTGAGACACCCCTGTCCTTGTTGACACTTTTAAACGGTGTTGTCTGTTACTGATGATTTTTGTTTCATGGTCTCACAGAGTCTTCAGTCTCTCCATGAAGAAAGGGCAACAGATGAGGTACCACTCAGAGAAAACAGCTGCCCCAATATTGTGTTGGCCCCTCCATGAGGGAGGAGGCGCTCCACATTGGTCATATATTTTATTTTTAAAACAGGCCTCTCTGGATGTCGCCTGGGGTCTTGGAGCTGGGCAGGACGAGGCACTGGCCTGGATGGACCAGGCTGGGGGCAGCCTTTCAGGAGTCACACCCTCAGTGAAGCATGCCCCCGCCGCCTCCCGGGGAATTGCTGGGGGTCAGAGGACCACAGCCTCTGCCCATCCCACCTCCTTCTGAGGGGCCTCCAGCAGGCTGCAGCGTTCTCAGAGCTGCTCCTCCTCCGTCTTCCTCTGACTTCGTCCATCTTCTCAGCAAGCAAAATTCTTGCCCTGTAGATTGACAGGGCAAGAGGAGTGATCGCAGAAAGCAGGAACCGTTTGGACTTGTCCATGTGATTCCGGGAAGGAAGCCGAAGGGGAGTGACGTGGCTGAGCACGCTCCGCTGGGAGTCCCCTGGGCACAGACACCCCGGCGCCCAAGGCTTCCATCTCCAGCCTTCCCTGCTTCACAGCCTCCAGTCCCCAGCTCCGGTCTCGGTCTCGTGGAGGCTACTCCTCTCCAGGGACACTTGTGCCTCCCTCCCTTCTACCCGCAGCCCCTACCCGCTGCCCACCATCACCTTTGACCTCCCAAGTAGGTTTCAGTGCTATGCCGCCTCACTCCCAAACCTCAGGAGCACAGACAAACCGATGGCAACACTTCGAGCAGATGCTTTATTGATTTAAAGAAAGTAACTCTTCAGCCACAAAATTAAGTTCTCACATATGCAAATGTGCCTCTACACATAAAGCAGCCTCTCACTCTATGACAGTTTTCTGCCAAGGAACTCAAAGCACCTGGAACCCCTTCTGTCCTCACCATACCTCACTGAAGGTGGGGGAGTTTTCTTCTGTCCAACAGGTTTGAAAGCTCAGGTTCACAGTCTCTGAGCGGCTGGCCATCCTCAGCCAGTCCTTGCCAGTGACTCCCAGCTTCACAGCCAGAGACAGATCACCCTGTCAACCCAGGCCATCTCATGGCTTAACAGCCCCTTCCTTCACAAGAAAAGAACAAAGAATCCAGGTGGTGGGGTGAAACACTGTGCATTTAAATGGTAAGATTAGTCAGTAGGTCAGCAAGTGACTAGCAAGGTAAATCCGTTTCCCCCTCTCTCCCCCTCCCCTTCTTTTTGTAAGACTGGCTATTGAATTATGTGTAGAATGTTTCAGGTATTACTGTCTAGTGTCTGCTTAGAATGGAGAAGTTTTCAACTTACTCAAGTGTCTGTATGGACTTGTGTCCATCTGCTAACCAAGACCATCAGGGAATGGAGGCAGAGTTTGCAACACGTGGGTGCCTTCAGAAAGGTCCGTGTGAAACACAGATTATATTGGTGTCATGCGTGTCCTGCTAACGTAACAGAACTAGATCACGTCCCTTTAACACAAAATCTGGGTTTTTTTCCCCCCAAACTGTTGATTACACAATAAATTTATTATTATATGTAATGTTATGTTGTTTTTGAAATGCCTTTATATATCTGTATGTACATCTCCAGCAGTATTTCAGGGAAATATTAGAGGGAAAAGAAAAAAACATTATTTAGCCATTTAACTTGAAATATTATAAAATAATTCACAATTTCCATGCCAAAACCAACTTTGTTGACTCTTTACAGAGGAAACAGATAGTTTGCCTTTTGGAAGCAAATCTCGGCAAAATGGTGAGTTGGTGGGACTTGTCTTTGGTAATTTTGATTTGCCAGAATGATATCTCTTCTTCCTCAAGAGTAAAGACTTCTGGTGGCATCGCAGATACACTTCGAGTGTTCACTTAGCACAGAAGAGCATGGCTGAATGTTGTCGTTGGTCTCCTGTTTGTATTATTAATTGCATGCGAGTTGCGCTTTCCCAAAATTTCAGTCCAGGACTTCCAGAGACTCCTAAAGACCCTAATCTACCATAATACCTAGAGAGCTTTAGGATTCCATTGGTTGTTTATTTTTTAATACTGAAGAATGTGACTTACGCGAGCTTTCGGAAATTGATTCAACTAAAACCTAAATCTAAGAAGATAAGGTAAAATTACTTGGAAGAAAAAAGAGATTTGAAGCACTTATCCAGATACTTTAGGATAAAAGCATCCTTTTGCAAAAAATATTTCAAATGAGACAAAATGAATTTATTGCATGAATCACATGGACAGTGATCTACATCCTTCAAGTGACTTTTCTTATGTAGCCAATACGGTGTGCCACTTCAGTCCCTTCAGCAGCTCATTTCCAAATTTCCTTATCTCTTGCCGCTGTCCTTTATGTTGGCAGAATTACAATAGACTCAGACCCGTGTGCTTTGAGAGAAAACCTGGAGTGTTCTTGTGAACTCGCCATTCAGTAGTTACCGAGACTCCGAAAAAGTTTGTCTGTGTTCCTCCTGACCGGTGGTTTCTGTCACCATCGCAAACATAAGACCTCCTGCATCTGTTCCCATAGCAACAGCCTCATGGGTGACCTCTGGCAGGAGCTCTGTAGCGCCAGCGTGAGCATCCCACGTGCCTGAGACAGTCTGGCCACCAGGAGGAGACTGGCTTTCCTCTCTCATCCTTCTGCAGTACAAGAAGGAAGCCCCATGCTCTGGCCCAGCTTGAGATGCTGCAAACTCCTCAGCACAAGCTGCTGCCAGGTCTGGGGCAGGCCTGTGGCACCCAGCACCCTTCAGAAGACCATCTGCCAGTCCTTTCCAGTTTTAGCCTCAAGAAGCTGCCCGAGCAGCAAGCTGGGGCCTGATCCAGGCTCACAAAGAGATTCTTCATCCCTCCAGTCCTGGGCTGGCCCAGGCAGCAGCAAGCCAGACTCTCAGGCCCTCGTGGAAGCCAAATAGACTCCCACCAATGCCACATACGGTCCTGGAGTCCCCAAAGCTGTTCTTGGACCTGGAGGTGGTCAGGGACAGAGAAGAGGACCAGCTGGGAACACCTAGAGAAGTGGATGTTGGCGACATGGGGACTCCAGCGTTCTGTGATCTAACACAGCAGGGGCCCAGCCCCTCGGGTGCCACCGCTGCCCCACATCATAAGCCATCGGGTGGGTTGTGCCAGGAGAGGCCTCTGGGCACACCTGCTTCATGCCACTGCATTCAACCGAAGCACCAATAACACACAAACAAGCACCAGTGAAAAACCCAAAGCCTTAACATCCTCTAGGAAACCCTGTGTCAATTTCATGATTCGTAACAGACATTGTTTTAGCATGGAGCTTGTCCCTGGGGTGATCCAGTTACTAAATCAACATCCACCGTCTCGATCCATGCACTCATGCTCCTACCAAAACCAGTTCTGCAGCGCAACAGGGCAGTGTCACCGCATCCTGACAGCTTTGTCCTGACGGGTCGCCGGGGCGTGTTTTCCTTGTTTACATCATTGTATCACCATGAAGGGGCAACAGCAGTTTTGTTCCAGCAGTGTTTTGGCCTTGGGTGGTTGCACGCTCCATCCTAGATTGGGCATTCTTGCACACTGCACGTGTTTGTGGAGAGCAGTGCTCATGGAAGGCAGTAAACCGTCCTTCCATTCCAGAGCATGGATAGTTTACTTTTTTAATCGTCACGTTTTATCGAACCTGCTCGTGGTTCTTCCTCTCTTCCCCCCCGACCTTCTTCTCATCTGCACTTTCCCGTCGTCTCTTTTCCACAAGATGAAAGCACTGCTGAGAGGGGAACTCCATCTCCTTCCAGATAAAGGGAAGGAGCCTAATTGTAAATTTTAAAAATAATGTAAGAAACTGCTTATGTTCTGTCAACAACCAAAAAACAGGAAGAATTGTATCTGTGAACTATCAAGCTGTATCTGTAAATAGATTAAAAAGCACATTATCTTTAATTCATCACTACAGACCTTGTAATCTATTGTATATTCAAATGTTTTACTGTATCAGAAAAAACATGCGATACATTCAGAAAAGCTGGGAGAATAATTCAAAATACAGTATAATTAACTCAAATTTTGTTGTTTGTTTATTCTTGGCATGGCACAATTTCCAAGTGGAAAATGTGCTTACCTTAAATTATCAACCAGAAAATGAATTTATCTGTGAGACTTCTGAGATTTATTTTATTGTTTTTTATTGGAGTATAATTGCTTTGCAGTGTTGTGTTAGTTTCAGCAGTACAACAAAGTGAATCAGGTGC EMBV3_04818 TCAGTGGCTCTGTCAACTCTCTCGTGCAGACCACCATCACCTTTCAGTTGCCTATGTGCA Gene GeneID:506549|LOC506549:XM_002687019:73_cdna Constitutive 0 NULL GeneID:506549 4 GENE LOC506549 NULL similar to CfOLF3 EMBV3_19895 TGAGTAAAGGAAAAGTAACGTGGGTCCGTGTGGTGGGAGCAAGTAGACGGGGGCTGGAAA Gene GeneID:507386|ARFIP1:NM_001083650:11_cdna UTR3_Alt 4 NULL GeneID:507386 17 GENE ARFIP1 MGC151527 ADP-ribosylation factor interacting protein 1 EMBV3_16852 GCACAGCACCAGTGTCTTTGTACTTTCTTCAGAGACCCCAGTCCCCACCACTGTCTGAAA Gene GeneID:519695|FBXL5:NM_001082440:10_cdna Constitutive 0 NULL GeneID:519695 6 GENE FBXL5 MGC148944 F-box and leucine-rich repeat protein 5 EMBV3_04104 GGACCAGCAGCTCGAGTTCATCAAGGAGCTGGCGGACCATCTCACCAACGTGTGCAAGAT Gene GeneID:786034|LOC786034:XM_002700230:209_cdna Constitutive 0 NULL GeneID:786034 X GENE LOC786034 NULL similar to Ferritin heavy chain (Ferritin H subunit) (Cell proliferation-inducing gene 15 protein) EMBV3_27313 GGGAGGGACTCGGGGCAGTGAGGAGCACACAATCCCCAGTAAGACTTTTTAGATTGTTTT Gene GeneID:508088|NDE1:NM_001100321:332_cdna UTR3_Alt 2 NULL GeneID:508088 25 GENE NDE1 NULL nudE nuclear distribution gene E homolog 1 (A. nidulans) EMBV3_27723 GGGGCAAGGTCCTCTTTCCACATCAAGGGATATACACAATGCTGCTACTGCTAAGTCGCT Gene BVT0102_042132 - 1 EMBV3_37732 GK000016.2:40029768-40045560 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067169 TCONS_00067170 1 XLOC_041377 NonCoding TCONS_00067169 XLOC_041377 NonCoding NonCoding - 16:40037864-40039393 - TSS50578 1088 1 TCONS_00067169_1 73 0.920036764705882 2 0.289267015706806 0.000337617636123337 2.77066706984226e-05 1.75093503704591e-06 1.50334643536324e-06 2.7226862992425e-05 6.67270160152412e-07 1.04720055816597e-06 1.49522950076479e-06 0.000108861337022244 0 5.59328876517321e-07 0 7.25347619208176e-07 0 7.49502171360723e-07 0.00153082583714868 2.63939996359372e-06 0.000325383227752744 8.95264804451571e-07 0.000125583275132923 6.16685221492964e-07 1.29420653497086e-06 1.50712337095852e-06 0.000947630101019614 0.000242924485992566 1.63610753014756e-06 0.000150783098943806 0 1.1700820057921e-06 1.1135796726173e-06 XR_228040.1 LOC101902468 PREDICTED: Bos taurus uncharacterized LOC101902468 (LOC101902468), 0.0 641 100.00 0.325367647058824 0 noncoding 0 0 0 0 -0.00968307219614538 0.947469295941043 0.0210281423492412 0.654713225078773 GGAACCTCCATACTGTTTTCCATAGTGGCTGCACCAATTTACATTCCCACCAACAGTGCACAGCGTTCCAAATTCTCCACCTCCTCAGCAATACTTGTGAGGGCCCAGGCTGCCCAATCCCTGCTGAAGAGGTGCATATTGCACAGGAAACAGCCTTCATTCAGCCTCCCCGACCTTCCCTGAGTTCCAATGGGCGGATTCAAGCAGTTGTTAATTAGGGAAGGGAGGGGATGAGAGACCACGGACTGTCAAGAACATCCCTGGGGCAAGGTCCTCTTTCCACATCAAGGGATATACACAATGCTGCTACTGCTAAGTCACTAAAGTTGTGTCGGACTCTGTGTGACCCCATGGACCACAGCCTACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAGTACTGGAGCGGGGTGCCATTGCCTTCTCCGGATATACACAATATCTTTGAGCTATACTGCAGATACTGAAAACCCCTCCAGGTGGGAGATTAACAATTAATGTTGCTATGCTGTCCACAAGCATGTAGACCCCAGGCCAGTTGGACCTGAAGGTTGATTATGCTCCTACTTAACTCACCACCAACCCATCAGAAGAATGTCCGTGAGCTGACCACGCCCTCTTTGAACAATTACTATAAAATTTCTCACCGTTTTCTCCAAGTTGGGACTCAAGAGTTTTGAGGGCGGTAGTCTGCTGTGGCTCCCTTTGCTTGGCAAAGTAATAAAGCTATCCTTTTCTACTTCACTCATAACCCTGTCTCAGAGATTCAATTCGACACTGGCGTACAGAGAAGCTGAACTTTCAGCCTCTGGGACTGGCCAGATAGAGCACCACAGACCTGGAAGCCCTGGAAGAATCCACACAAGGACTAAAATGGAATGTTGTTCCAATTCTGAGCAAACCACATTCCTGTTCTCAGATGAGTCATGAATAGTCCTCCCTCTCTTTACTCAATTCCCTCTCTTTTACCCTGGCCCACCATAAATGTGGTGTCTCAACCCAAGTTGAGTTGAGAAGTTGATTTCTGAATTAGCTTCCCACCTCTCCATTCTCTGGCCACTGAATAAAGCTGTGCTGTTTCACT TCONS_00069160 r 5' 5682 TCONS_00069160 r 5' 5682 EMBV3_25089 GGCTGGTATATCTGGTTCTTGCTGCTGATTTTCCTGGTGGCTCTTCTCTGTGGAACAGTG Gene GeneID:100295666|LOC100295666:XM_002684836:175_cdna Constitutive 0 NULL GeneID:100295666 1 GENE LOC100295666 NULL hypothetical protein LOC100295666 EMBV3_22806 CATTCTGTCTGTGGTCTGCCTCACTGTTCCCTTTGGACTGATTCTGACATCTTATGGCCG Gene GeneID:523389|LOC523389:XM_002697402:82_cdna Constitutive 0 NULL GeneID:523389 23 GENE LOC523389 NULL similar to Olfactory receptor 11A1 (Olfactory receptor OR6-30) (Hs6M1-18) EMBV3_19235 ACCAGTTCTGGCAGCTCTGAGGAAAAGCAGAATTCTGTGTCCTCTGAGGAAACTGATGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34935 CGTCACAACCAGTGAACATCACTGTCCAAGCCGGTCTCACTGATGCTGAAAATGATGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12238 TGTTCCTCTCACACCTGAGCTGACCAAAGATGAGTCACCGGTCATATCCAGTTCGGGACT Gene GeneID:540017|FBN2:XM_002688974:49_cdna UTR3_Alt 2 NULL GeneID:540017 7 GENE FBN2 NULL fibrillin 2 EMBV3_24805 CAGCCATCTTCATGTGGGCTTTCTCCCCAGTCCATCGTCAGAACTCTGGTTGAGCTGTTA Gene GeneID:509955|TRAPPC2L:NM_001098920:177_cdna Constitutive 0 NULL GeneID:509955 18 GENE TRAPPC2L MGC166180 trafficking protein particle complex 2-like EMBV3_42785 CTTGCGGAAAAACCAGCATGACCCCCACAGACAACGAAGAACTGAAATTGTCGCTGCAAG Gene GeneID:616158|LOC616158:XM_002690091:67_cdna Constitutive 0 NULL GeneID:616158 9 GENE LOC616158 NULL similar to C44B7.4 EMBV3_03335 GGGATGAGGAGGAAGAGTGGCTTTATGGCGATGAAAATGAAGTTGAAAGGCCAGAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06880 GGCTATGGTGTGGGGAAAACTAAATAGAGAGTTCAAGAACAAATCCACCTGTATATAGAC Gene BVV0102_051843 + 1 EMBV3_21013 GK000030.2:54704984-54753131 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37650 CACTGATGATACCTCAGATGTTGGCTGGCTATGTGAACTGCCTATTTCCTGTGCCGAGCT Gene BVV0102_073123 + 0 NULL GK000002.2:122359919-122427863 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103660 TCONS_00103663 TCONS_00103655 TCONS_00103657 TCONS_00103658 TCONS_00103662 TCONS_00103654 TCONS_00103664 TCONS_00103661 1 XLOC_062178 Coding TCONS_00103663 XLOC_062178 Coding Coding PTP4A2 2:122339891-122362518 j TSS76941 4355 1 TCONS_00103663_2 167 0.0805970149253731 6 0.807787501104924 0.00839804205803554 3.41582126956285e-05 0.00188115131590943 0.00143930133949973 0.00767108490722893 1.28291082420516e-05 0.00160328363281992 0.0006368084413817 0.0106690179810745 0.00121201206398068 7.93407158209739e-11 0.000141833442559524 0.00175682254530524 0.0006631980695484 0.00151801797093886 0.00994499715110064 0.012115427237798 0.0119495546659021 1.40024506092693e-06 0.00152745230934541 7.74194611485481e-05 0.00798864894960668 0.00394646465958125 0.00524712226703259 1.69189423475797e-06 0 0 0.000762425216561436 0.00213252024662964 0.00246599963349194 XM_005203002.1 PTP4A2 PREDICTED: Bos taurus protein tyrosine phosphatase type IVA, member 2 (PTP4A2), transcript variant X1, mRNA. 0.0 6291 100.00 0.800688863375431 XM_005271228.1 PTP4A2 PREDICTED: Homo sapiens protein tyrosine phosphatase type IVA, member 2 (PTP4A2), transcript variant X1, mRNA. 0.0 2498 91.75 0.401148105625718 TCONS_00103663_2 sp|Q12974|TP4A2_HUMAN TP4A2_HUMAN Protein tyrosine phosphatase type IVA 2; 3e-124 351 100.00 0.994011976047904 2 coding 1 0 1 1 -0.668623192504427 0.00399175284495102 -0.221113452938643 0.0110914799730005 GAGGGAAGGTGAATCCATGTTGAACTAAGCTGGTTTTTCGTTGGAATATACGTTGCACATTTATGGCGATTCTGAGCGTGAGGGCAGACTTCTGCCAGGCTCAGCACAGCGTTTCCGCTGACAAGTGAGCTTGGAGGTTCATGTGCCATAATTAACATTGCCTTGAAGACTCTGGACACCGAGATTGGCCTCAGAAATAGTTGGCTTCTTTTTTTTTTTTTAATTGCAAGCATATTTCTTTTAATGACTCCAGTAAAATTAAGCATCAAGTAAACAAAAGTGGAAAGCGACCTATACTTTTAACTTGTCTCACTAGTGCCTAAATGTAGTAAAGGCTGCTTAAGTTTTGTATGTAGCTGGAATTTTTTTGTAGTCTGAAGGTATCCATCAACAGACATTGAGGCCCAAGTTGAATTTGGATTCAAGTGGATTCTAAATACTTCTGCTTATCTTGAAGAGAGAAGTTTCTGAAAGAATAAACAAGTTGAATAGAGAGAACACTGATTTAGGCATTTTAGTGGTCTTTTTAATGTTTTCTGCTGTGAAACATTTCAAGATTTATTGATTTTTTTTTTCATTTTCCCCATCACACTCACACACGCACGCTCACACTTTTTATTTGCCATAATGAACCGTCCAGCCCCTGTGGAGATCTCTTATGAGAACATGCGTTTTTTGATAACCCACAACCCTACCAATGCTACCCTCAACAAGTTCACAGAGGAACTTAAGAAGTATGGAGTGACAACTTTGGTTCGAGTTTGTGATGCTACATATGATAAAGCACCAGTTGAAAAAGAAGGAATCCACGTTCTAGATTGGCCTTTTGACGATGGAGCGCCACCCCCTAATCAGATAGTAGATGATTGGCTAAACCTACTAAAAACCAAATTTCGTGAAGAACCAGGTTGCTGTGTTGCAGTGCATTGTGTTGCAGGATTGGGAAGGGCACCTGTGCTAGTTGCACTTGCTTTGATTGAATGTGGAATGAAGTACGAGGATGCAGTTCAGTTTATAAGACAAAAAAGAAGGGGAGCATTCAATTCCAAACAGCTGCTTTACCTGGAGAAATACCGACCTAAGATGCGATTACGCTTCAGAGATACCAACGGGCATTGCTGTGTTCAGTAAAAAGAAGTGTATACGAAGGCTGACTTGATTGTAGCATTTAGAGGGAACTCTTGGTACCTGGAAATGTGAATCTGGAATCTTAACTGTGTCATCAAAGTAGTGATGGATTCAGTACTCCTCAACCACTCTCCTAATGATTGGAAAAAAGCAAACACAAATCCCTCTATAACGTGAATAAAATGTTTAAGAAAAGAAAAAGAGAAAGAAAATAGGGATTAATTTAGTGAAGGATGATTTTGCTTCTAGTGTTGGAGTTTGAATTTCTGCCAGGATTGAATTTATTTCAAAATCTCCTGTCTTTTTTAACTTTCTCAAAATAGGTCTCTAAGGAAAACCAGCAGAACATGAGCCTCTACAGAACCATCTGTTTGGGGAGCACACTCTTCCATTATGCTTGGCACATAGATATCCCTGTTGTGGGATTTCTTTCTTTCTTGGGGGAGGGGGGTGGGGGGAGATTGGTATATTTTTCCCTTCTTCTCACTTTCTCCTATCCCTGTTTTTTTTCCCCTGATACAAGTTGTAGGTGGAATAGGAGAAGCCCATGTTGCTATAGATGTGTGTGCAGTCTGGCAGCCTTAAGCCCACCTGGGCACTTTTAGGAAAAAACAAACAAAAAACACCCAAAAAAAAAAAAAAAAAAAAAAGAGACAGTGACATATATATTGTATGATCCAGGTGGTTCTTAGTCTTTACTGATGATGGGGTATTCATGTTAGTTTCTTTTCTTGAAAACCCTATTCAGCATTAGGCAAAGTAGCCAGGAATTTTTTGTTTTGATAAATTTGTAGGGAAATGGCATTTTAAGAGGAGTCTCTCAGAGAGCTTAGCTGAGAGTCGAATTCATCTCTTTTCCAACCAATGAAGCTAAGTGGATGTCCCAGAGATGTTTGTTTCAGAAGGGGAGTACTCCAGGCCATCACTAAAGATGTGTCCAGGCAGAGCCTTAGTACACTTTCTACACCTTGTAGAACTGTGGGCTGTAGCATTACTCTGATTTTCTGTCTGATGATGTCAGAGAATGCTGGTAGTGTAAAGTTTTTTATTTTAGGACTTATTTGTACTCTGAATTTTCAGGAACAGTCAAAGGAGTAGCAGCAAAGACACAATATTTTAGACCTGAGAAATGCCTGAAATGGGTATTTTCCAAACTGCTCCCTATATGTACAGTTCAGTTTAACCACTGATTGCCTTGTTATTTTCTTACTAGGTTCTTTATGAGACTTAAAAAAAAATTTTTTTTTTTGCTGGTTCAAAACCAACAATGCCTAGTGAGTATGTGTCCACAGGCCATAACAGGGTTAGAAGAGAGACATAGAGCAGCAAAGGGACTGTGGCTAGTGCAGTGGTGTAGTGTCATTTCTGCAGATTCTTTGCTGGGTTTAATGTACTGATCTAGAAAAGCTGTTTTTCTGCTCCTTTGCTGTTGTGACCAGGCTGCATTGACAGAGCAAGTTGGATGATACCATCAGGGGCTCTTGCACTCTCCATTTGAATATTGCATAATTAATAGTGCTCTGCTTCTAAGGATTTGAATGGAGTCTTAGGGTCATCTTGTCCTGTTGGAATTTGCTATGCAGAGCCTTAAACTTCCCATTTTGTTAGGATCAGCTAGGCCAGTAGGAATGGACCAGGACCTTGTCTCACACTGATGATACCTCAGATGTTGGCTGGCTATGTGAACTGCCTATTTCCTGTGCCGAGCTGTTTTTGATTTTTAAATAAATGAAAATCTGTAGATTCTCTCCTCCCCTGTCCCAAAAAACAAAGCAAAATAATGCTTTTTGAAATTGTCTCTAGGATTTTAAAGTGAAAAAATGATGGTACTATCCAAAGTTCTTTATTTCAGAATCTGACAGTGGATTCCTTTAACATAGGCTCAAGATCAAAACAGCATACCCTCTAAGCTCAGACAGACTGTTGACTCCAAGGGTTTTGATCAATACCATAACAAACCTTTTTCCTTTGACATACTCTGGGTTTTGTTGTTTGGAGGGAGAGAAGAAGGGAGGGGGAGAGAAAGGGGGAAGAGAGAGAGAGAGAGTGTGTGTGTGAGTGAGCGAGCGAGTGTGCAGTACCCACCAGTAACAGTGCCTGCCTGAGTTAGGAAAGTGACATTCCTGGTTCTGTATGAGGAGAAGGGTATGTACAATAACATGCAACATCAGCCCTCATATTGTTGTAAATTACAGAATAATGTTAATTGTTCTCAAAACTGGATTTTCTTCAAAATTAAAAAATTTTTTTCTTTCGGATTTAATGAAGTATTGCTAGCTGAAGCCAGTTTGACATGGTGAGAGAGATGTCAGACTGATGAAAGGTGTGCAGCCTGATTTAAAACCAAACCCTGAGCCCTTTTAAAGAACAATAAAACATATTTTACATGCTCTTTGTCTGTGCATTTGTTCTCTGTCTTCAGGTTGAATTTCATTTATGTCTGCTTAGAAATCTTGGTATTATCAAGGCTTCTTTTGGGTCCTGCTTATAATTACTATAAGGAGGTGAAATAATCAGATGTTGGCAAGTTTGAAGATTTCATGCCTCCTGGGTGTTCAGTAAGGGCAGACTTAACAGTAGTTGGGATACATGAGGTTCACTTTCTGGTTCAGTTCTTGGAGGTAGCACTGTAGGAATTCAGCATCTCTTCTCATCTCAAAGGATTTGTTTATTCCATAGAGTTTTGATGAAGCACTGAAACTTTTTACTGGAAAGCTTCAAGAACAGTGAGAAAGGAGGAACTTAATGTATCATTCGATTTGGGGGTGGGAAATCTCCCTTAAACTATGGGTGGACATCTCTCCATCCATCTGGATAACAAATTCATGGGTGAGGTACTGAGAATGAAAAAATAAGACACTGATCCCACTTTGGAGGACCTCTGTCCAGTAAGGGAGCCAGATACGTAGACAGTGGTTACAGAGCTATGTGACTTAACAGTTCACTGATCTTTCACTTCATGTCTTTCATTATGCAGCTTAGACTCTGTGGTCCAGTGTTAGAATCACTTAGCTACATAGTCAATTGCCTTGCCCCATCTCTTGCTTCATTATACTTGCCTGGCTGAACTCCCATTTTTGGTTAAGATCAATATGGCACCTCTGCAAGTTTAGTCAGCTGAACCTGCTGGCACAGTTTCTGTGTTTTAAAGTCACAATCTCAAGTAGACCTTAGTATCATCTGATGATCCTATTTGCATTTCACTGTCCCATTTACTCTCTTGGTAC EMBV3_41115 CATTTTAACAAGTTCAGCAGGGGGCTGTCTGCTCCGTATATTTGAGGAGAGCTGTTCCAG Gene GeneID:281529|THBD:NM_001166522:5_cdna UTR3_Alt 1 NULL GeneID:281529 13 GENE THBD NULL thrombomodulin EMBV3_00937 GACTGTCCCCACGTCCGGGAGAAAGGCTCTGGGAAGCAAAACAAGGACGTCTGTGAGTTA Gene GeneID:525427|ELMO3:NM_001102091:303_cdna Constitutive 0 NULL GeneID:525427 18 GENE ELMO3 MGC166191 engulfment and cell motility 3 EMBV3_24329 GGAGGCCCAGTGATGGAATGTTAGAGGAATGGAAACTGACAACATGTGAAGGTTTAGAGG Gene GeneID:527492|CTNNA2:NM_001102110:101_cdna UTR3_Alt 2 NULL GeneID:527492 11 GENE CTNNA2 MGC148616 catenin (cadherin-associated protein), alpha 2 EMBV3_39734 TCTAATGGTAGGAAATATAAAATAACCCTAGATGTTTCCATGGGCCAGTGTGATGACTGG Gene GeneID:522345|SLC30A9:XM_002688216:106_cdna Constitutive 0 NULL GeneID:522345 6 GENE SLC30A9 NULL solute carrier family 30 (zinc transporter), member 9 EMBV3_22547 CTGTCAGATCCAGAAACTAAGCTGCCGACCACCAGGCTGAGACCACGTGAAAGGGCTGCT Gene BVT0102_167193 + 1 EMBV3_32953 GK000007.2:20397382-20436668 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12977 CCAGGTTTTATTAGGATGGAATGTGATGTTCAGCAGCAAAGTTAACAGAAACTGGCCTTC Gene GeneID:508631|TMEM49:NM_001075368:15_cdna Constitutive 0 NULL GeneID:508631 19 GENE TMEM49 MGC140672 transmembrane protein 49 EMBV3_23469 CTGGGTCTCACCTCGTCAGTGTGCATAGTGGCAGAAATTAACAACAAGGATGAATGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38217 CTGCTGAGGTATTTGTTGGGGCGGATCCTAACGGGAATCGCCGACACCGAAGCCGTCGCT Gene GeneID:513603|PCSK1N:NM_001083680:63_cdna Constitutive 0 NULL GeneID:513603 X GENE PCSK1N MGC148915 proprotein convertase subtilisin/kexin type 1 inhibitor EMBV3_18546 AAAGACAGAAGAGGGGAGAGCCATCAATGATATAGATGGTGCCATTTCAGTTCAAAGTTG Gene GeneID:782335|LOC782335:XM_002689428:44_cdna Constitutive 0 NULL GeneID:782335 7 GENE LOC782335 NULL similar to F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat protein 17) (F-box only protein 13) EMBV3_11864 CAGGTATTTTTTTAAATCAAGGAAAGGCTCATTTAAAACAAGCAAAGTTTTACAGAGAGG Gene GeneID:785475|CDH11:NM_001081624:486_cdna Constitutive 2 NULL GeneID:785475 18 GENE CDH11 MGC152019 cadherin 11, type 2, OB-cadherin (osteoblast) EMBV3_11112 TGGCCTTCAAACCCAGCCCCTAGTTCATCCTACACCTTACAACCTCTACTCTTAAGGGAC Gene GeneID:510140|SEMA4B:XR_084003:168_cdna Constitutive 0 NULL GeneID:510140 21 PSEUDO SEMA4B NULL similar to Semaphorin-4B EMBV3_04679 CGAAGTTGCATGAACGTCTTAGAGAGATGTAACTGTTTGTGTTAACTGTTGCACACTTAG Gene GeneID:522319|LOC522319:XM_002693971:188_cdna UTR3_Alt 2 NULL GeneID:522319 16 GENE LOC522319 NULL hypothetical LOC522319 EMBV3_08109 AGGAATGTCGGCCAAGGGCAGCCTGCTTCGATGCCTGTGGACCTGGACTCCTTGTCCCCA Variant GeneID:506657|MRPL55:NM_001075276:17_cdna 225^790 3 EMBV3_37368 GeneID:506657 7 GENE MRPL55 MGC137378 mitochondrial ribosomal protein L55 EMBV3_01389 TTTCACCCATCAGGTGTATCTGGGAATCTTTCCTTCCAGACATCTCTAAAGTAATAACTG Gene BVT0102_018847 + 0 NULL GK000011.2:43739820-43787570 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024830 TCONS_00024829 TCONS_00024827 TCONS_00024825 TCONS_00024828 TCONS_00024831 1 XLOC_014587 Coding TCONS_00024831 XLOC_014587 Coding Coding KIAA1841 11:43713038-43741805 j TSS18133 2963 1 TCONS_00024831_2 255 0.212622342220722 12 0.897413613293471 0.00145243668350995 0.000925843985853998 0.00130169487387395 0.000806909424604324 0.0011387408316427 0.000573454903077668 0.000452760754448392 0.000964885340684811 0.00140811337393377 6.65509679005361e-05 0.000184278006068262 2.26998142018935e-07 8.15047744071412e-05 0.00011801282579358 6.25253478207336e-09 0.00237614808527711 4.32487777232797e-06 0.000939956765527787 0.00130870151266031 0.00117241272037481 0.000387503802475525 0.000153773734043728 0.000388808012822563 0.000467153541494501 0.00232086439711187 0.00177477446227652 0.00107897819291562 0.000484863608909298 7.28928050957655e-05 0.000245248209877878 XM_005193896.1 KIAA1841 PREDICTED: Bos taurus KIAA1841 ortholog (KIAA1841), transcript 0.0 2403 99.85 0.450894363820452 NM_001129993.1 KIAA1841 Homo sapiens KIAA1841 (KIAA1841), transcript variant 1, mRNA. 0.0 1429 87.12 0.389470131623355 TCONS_00024831_2 sp|Q6NSI8|K1841_HUMAN K1841_HUMAN Uncharacterized protein KIAA1841; 4e-147 433 90.20 0.992156862745098 0 coding 0 0 0 0 -0.0116314165785577 0.932112715199851 0.0265185991396143 0.674666280617313 TGCCCCATATGTTTTCTAACACTTGATATTGTCAGACGTTTCTGTGCATAGAGTTTTCACACTGTCAGTACCACTCAGAGACAGTGATTTATCCTACTGCAGGAAGTTCACTGAGTACTGTTGGCACTGGAATTTATCCCTGCTGTAACCAAAAGGTTCTTCGATTTGACCCCACTCAGCTTACAAAGGGTTGTAAAGTAAAGGACCATATGGTTACTCTTCGTGATCAAGGTGAAGGTGAAGATTTGCTGTCCTGTCCAACTGCCAAAATACTGGATGATCTGCACAAACACAAAGATGTCATCCTTGTGCCTTTTGCTAGAGATACAATTAGTGATTCTGGTGGTCCCTGCGATGAAAAGGGTCTAGACTGTGATGTTTTACTGGAGCCAAATACACCATGGGGCCCCAAGAGTGGGGAGCTTAATGCTTTCTTATCACTGAAAAACTGGACTCTGCAGCTGAAACAACAGTCATTATTTTCCGAAGAAGAAGAATATACCACTGGGTCTGAGGTCACTGAAGATGAAGTTGGAGATGAAGAAGAAGTATCCAAGAAACAGAGGAAAAAGGAGAAGCCAAAGAAGTTCACTAAACAACCAAAAAAGCAGATGTCTTCACCCTGTGGTCAGAAGAAAGAAAAGGCACTGGAGAAGTCAACTTCTAGAGATGTGTCTCCTTTCATTGTGAGTATGCAGAAGAATAAGTGGGATGCCACAAGATCCTTGAGATTCAACCAAGATGCACAAAGAGAAGATGATCAGCGGCGGATGTCTGAAATTACTGGGCACCTAATAAAGATGAGATTGGGTGATCTGGATCGAGTCAGGTCAAAGGAAGCAAAAGAATTTGCAGGAGGTATTTATTCCAGGCTTGAAGCACAAATCAAGGCCTCAGTGCCAGTCAGTGCTCGGCAGAGCAGCTCGGAAAAAAACACAAGGTCTAAAAGTCGTTTTGGTCAAGGTCGGCCTGTGTAAAGCACCTTTAAATATAAGAAGACAGAAGACATACCTCTGGACACTTGAAATTGCTTACTTGAAGATCTTTGGAATGATTACTTCTAAATGTTTTAAGTTATTTATTAAATATTCTTGAAAGCCACAAAAATCTAGTGGTAAGGGAAATATATAGTTAAGTCTTATGAAATTGTAAATATGAAACTTCTTAAATCTGATTTTCCTTTGGTGTTGAGAGAATTCATTCTTAGGTAGGTTGATAAGGAGTCTGGGGCCCTCAAACAGGAAGGGGTCCAGGGCCCTCACAGAGGAGGAAGGGATCTGGGGCCCTCGAGAAGGAGATAGGAGCCTGGGGCTCTCAAGGAGAAAAGGACAAACATTTTTTTTCTACATTAGTCACGTAAAACATTTTTTCTTTAAGCCCACAGCTAATGACTCAAGGGTATGTTTTTCCTTAAGCTCTATACTAATGATTATGTAACAGCAATGTGTCTTGTTCTAGGACATGTTTATCCTTCTTAACAAGAACCTTCTGACTAGTCTTGTTATAATAAGATGTTTTTTGTGGGAGTGGATCTGGTAAGACCTTTCTATTGTTAGTTCGAATCTTGTTAATTTAAGATGAATGTTGTGGGAGTGGGTCTGATCAAAGTATATAAGGCCTTGATAAGACTATGGAGGGAGGGCACTCTCCATCCCCTTTCTGATGTCTATGTCAGAAGGTTTCTCTGTCCCTTTTTATACTTTAATAGAATTCTCCTACACAAAAGCTCTTGAGTGATCAAGCTTGGTCCCTAGTTCTGAAGCTGAAATCTTCTTCAGAGATCACAAATCCAACATCATTCACCGTTAGCTATCAGTGTGATGCTAGGCTATGTAAAAAATTAGTATTTAGAAATTTATATAGTTAAGACTCCAAGGCATTTGTTACACTTTATTTATTTGAAAGAGAAGAGGCCTAAACTCTCAAATAGCTAAGAGTTTTTTAAGATCTTAAAAAATTAGGGGAACACATCTAGTAGTGGTACTGTACATGTGCACTGATTATGTATGTCTTTGGGCTGTAAATCTTGTGATGGCATTGAGAACTGCCATTTATGTGACGAAATTTCCAGTGATGCTAATTTTATGCTTGCATGACTTTTAAGAAGTGACAGATCTCAAAACTGAGTTACGTAAAATTTTAAGGTGAAGTATTTCCTGTTTTGGGCAGAAGGCTTAATTTTTTTCAGTGTTATTCCAGAGAAATCACAATGTTAATCCAACTCTTTTTTCAGTTTTTAATATGTATTTATTGGTCTGGAATTACTGATTATTACTTCTTTCTTCTGTGAAGCTAGTTAAAACAGCTGAATTTGTTAAAAGAAATTTGGATTCTGAAGTTGTTAAAACAACTGTTGATAGTTTTAGGATAGTAAATCATTTCAGTTGTATAAGACACCCACTGTACAGTTCTTAGGACACTAAAACTCAACCATAATTCTATAGCCATTCAAATAGCCCCTTAAGATGGTTACAATCAGTTATTACTTTAGAGATGTCTGGAAGGAAAGATTCCCAGATACACTTGATGGGTGAAAAATCTAATTATTCAGGAGAAATCAGTTTTTCTAACCAAGCAGAAAGAGTGCTCAGGGAAAATTTGTTCCAAACCATAATCATATAACAGTTATGTGTTTGGAAATTACTTATATGTAGGTCTCTAAAACACTTTAATTTGCATTGTTTTTATTTTTAGTCTTCATTTATCTTAGAAATTTTCTTCAAATTATTTAGAAAACAGACTTGCTAGTGTATGACAGAACAGCAATTTCTATTGAAATGTTGAAGTGTTATGTATTTTTAATGAATATTTTATTTGGTAAATAAAGCTAGGTTTTATTTGATGTTACATGCATAGCTTTGCCAAGATTTTTGAACTTCTGTTTGGAAATTTTGTTGCAGTCGACATATTTTTCAATGGTTTGATATTTTTGAAATAGTTTATACATTTTATTTGCAAAAGAN EMBV3_19462 CCATGGATTTTTCTCCCAGAAGTGGGTATTTTGCCTTGGGGAATGAAAAGGGGAAGGCCC Gene GeneID:505846|UTP18:NM_001098879:62_cdna Constitutive 1 NULL GeneID:505846 19 GENE UTP18 MGC159798 UTP18, small subunit (SSU) processome component, homolog (yeast) EMBV3_02678 GTGTTCTCTGCGCTGATCGAGTTTGCTACCGTCAACTATTTCACAAAGAGAGGCTGGGCC Gene GeneID:523515|GABRA5:NM_001075844:26_cdna UTR3_Alt 2 NULL GeneID:523515 21 GENE GABRA5 MGC139683 gamma-aminobutyric acid (GABA) A receptor, alpha 5 EMBV3_25563 CTGGCCCTGTAGGTCTGATGGATTTCACGCTGATCCCTGACTTGGCCACAATCTTTCTGA Gene BVT0102_094835 + 1 EMBV3_16247 GK000004.2:115821950-115880513 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05678 CCCCAGCATCCCCCTGCGCTGGACAGTGTTTAGCTCCGGGCCCATGACTCTCTGACAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26259 GCTCAAGGCCCACAGGATCACAGGGTCTACACTCCATGTCTATAGTTTCTTACCTCCTAC Gene BVV0101_066629 - 1 EMBV3_08630 GK000018.2:46825749-46857106 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05348 GCTGGTAAGAAATGTCGTGGTCCACCCTATGTTCAGTGAGACGGGATCTGACCTGTCAAT Gene GeneID:510042|STARD3NL:NM_001075427:39_cdna Constitutive 1 NULL GeneID:510042 4 GENE STARD3NL MGC140610 STARD3 N-terminal like EMBV3_01038 AAGGATTGGGGCTACTCAGCCAGAGACTCCTCAGCCTCCAGGAACAAGTTATCACACAGT Gene BVV0102_074058 + 1 EMBV3_14787 GK000030.2:104013031-104047705 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38564 AGCAACACAGCCCACCAAGGCGAGTTCATCTTTTAGTCAAACTTGGAGGTGGCGGTCCTT Gene BVT0102_105061 + 0 NULL GK000024.2:37948739-37994545 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11783 AATCTTCCATTCGAGTTGCGAGGAAAGCTGGGGATTGCTCTCGAGTGACTGCAGGGCCAA Gene BVT0101_027412 - 1 EMBV3_23773 GK000009.2:97006058-97010522 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18487 ACTGGGGGACTCCCACTACTGGATACTTTTATGGACGGACTCACCCTGATGCCTTAGCCA Gene BVT0102_206318 + 0 NULL GK000014.2:66648369-66649351 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053736 TCONS_00053729 TCONS_00053734 TCONS_00053727 TCONS_00053730 TCONS_00053733 TCONS_00053737 TCONS_00053728 TCONS_00053731 TCONS_00053738 TCONS_00053732 TCONS_00053740 TCONS_00053739 TCONS_00053735 1 XLOC_031814 Coding TCONS_00053727 XLOC_031814 Coding Coding VPS13B 14:66648221-66657878 j TSS39577 2194 1 TCONS_00053727_3 249 5 0.773301574150787 0.00079474489300764 0.00154050460850391 0.00177050147268288 0.000510856775290363 0.00108165247358112 0.000602124516160205 0.00105077249882217 0.00177578289325698 0.00142311724948799 0.00057893275806944 0.000544457311436134 3.64512592226234e-05 8.78753654142526e-05 0.00107910044511908 8.84337297356771e-05 2.80879787553558e-33 4.04544431781557e-74 0.0039593711430327 0.0023651082288579 0.00214117676555777 3.47918035468938e-05 0.000394855316978766 2.67306593223598e-208 9.5961811115007e-83 0.00107730317198431 3.54952523565169e-11 0.0012462227561873 2.19170236890281e-311 1.32376408019201e-09 0.00146965641298064 XM_001788158.4 VPS13B PREDICTED: Bos taurus vacuolar protein sorting 13 homolog B (yeast) (VPS13B), mRNA. 0.0 3595 100.00 0.907930720145852 NM_017890.4 VPS13B Homo sapiens vacuolar protein sorting 13 homolog B (yeast) (VPS13B), transcript variant 5, mRNA. 0.0 1113 90.49 0.36873290793072 TCONS_00053727_3 sp|Q7Z7G8|VP13B_HUMAN VP13B_HUMAN Vacuolar protein sorting-associated protein 13B; 3e-154 480 91.57 0.995983935742972 0 coding 0 0 0 0 -0.785691548992289 0.0355504636601582 -0.0639725754827262 0.41950071625968 GAGAATTAACGATCTCCTACAAGTGCAATTGCTGGTATAGTTGATCAGCCAATGCAGAACTTCCAGAAAACATCGGAGGCTCAAGCTTCAGCAGGACACAAGGCCAAGGGTGTTATCTCTGGCGTGGGGAAAGGAATCATGGGGGTGTTCACGAAGCCCATCGGAGGGGCTGCTGAGCTGGTGTCACAGACTGGCTATGGTATTTTACACGGAGCTGGACTTTCTCAGCTTCCCAAACAGCGCTATCAGCCAAGTGATCTGCACTCTGACCAGGCTCCAAACAGCCACGTCAAATATGTCTGGAAGATGCTCCAGTCTCTGGGCAGACCGGAAGTGCACATGGCCCTGGAGGTTGTTCTGGTGAGGGGCTCAGGCCAGGAGCACGAGGGCTGCCTGCTGCTGACGTCAGACGTGCTCTTCGTGGTGAGCGTCAGCGAGGACACCCAGCAGCAGGCCTTCCCAGTCACGGAGATCGACTGCACACAGAACCGCGAGCAGAGCAGCTTGCTCATCGTGCAGCTCAAGCAGCCCAGAGTGGCCTGTGACGCAGAGGTGGATGGAGTTCGAGAGAGACTGTCAGAGCAACAGTATAACAGACTTGTGGACTACATCACAAAGACCTCTTGTCACCTGGGCCCCGGCTGCTCCTCCGTGCAGACGTCATGCCCTGTGGTGGCTGTGGAACCGCTCCCCTCCACTGTGAAAACATACCATTATATGGTTGATCCACATTTTGCCCAAGTTTTCATTAGTAAATTTACCATGGTGAAAAATAAAGCCCTGAGGAAAGGGTTCCCTTGAGTCCCCTCCAAGGTGTTGATTGCTGCTTGTGCCATTATTTTTGAAAAAGAAACCTAATGAGCTCTTAACATCTATTGTGGACACGAAACCACTGTTCAATTCAAACTCTTCCTTTTTCCTACAACTAAGATACTTCAAAATTGAGTGATTAAAAAACTTAGTCCTTTCCTGTTTGGTCTTATCGTGTATTGAAAATACATTCCTTTTTGCTCTTTTTGCTAAAATTTCGACTTTAATTAAGATTGTCAACTCTGTAGTCAAGCGTTGGAAACAGATGTAAACTTTATCTCCTGCTGCATCTCTTTTTAGGATGAGACATCATCTTTGCCTAACACCCTTCTCTGCAGAAGTTTAGCTTTAAATGAAATTCAATGCTTAAGATCTTACTGTTTAACTTGTTAATGTTATTTAAACGTGATGCTATTTTAAGTGAAAGCTGCCATGTACATTTCTACTCTAAACTTTTACTGAAATTTTACTGATGACTTATCCAGGTACATTTTGGAAAAATGTCTTTCTAATCTGTTTTGCTAGGCAAGCAAATCTTTTTTTGTCTACTGCTAAAAACAGATCCAGGGTGCTCAGGTGAGTTTCTTTAGTTCCATAAGCAACACACTACTGGGGAACTCCCACTACTGGATACTTTTATGGACGGACTCACCCTGATGCCTTAGCCAAGTCAAGGACCCTAACACTAACCTTAACAATAGTTCATTTTGATGACTTAGCATGATCCAGCATAAAGATATTACCATGATTTTTTGTTTTTAAAAAATGGATTTGGCTCAAGATCCTAGGTCACCACGTACACCTTGAGCATTCAGTAAAAATTTGATACTCCAACTAAAATACATTTTTACTTATTACATCCAAACTTGGGCCTACAACCTGATACCTACAGTTGTGAGATGCTAAGGAATTTCAGTTTCAAATGTCTGCTTTAACTTAAGCCTCACATGTTACTGGGCATAAGAAAGAGATCACTGCATCGTTGTTTACTGTTAATGGACACTTTAGGCTGAATATGAAAAAAATGGCTCCACCATTACTTTGCTATATCATACTCATTTAGGAAAGTGATAGTTTTGTCAACCACAAGAGTGACTATTTTTAAGCTTGTAAATATGTATTAAGTCTTGTATCTTTTATGATAAATTTGCATACTACTAATTGTTATATGAAATTGTTTAAAATAAAACAAATTCTTGAATTACTGATCATACATAAACGTGGGTTCTTAAAATGCAGGTTTCACTGATACCCAGGTTTATTACAGCTTACATTATTGGACTCAAGAATTCTGCACAAGAAAATTTGTTAACCTAATTAAAGAACTGGGGATTCAGTTAGTTTTCACTAAAATGACACAATTCTTAAAGCTCTTTTGATCACA EMBV3_19913 AGTCGGCTGGTCGTGCATCAGCGAACACATACTGGTGAAAAACCTTACCGATGCAGTGAA Gene GeneID:539365|ZNF432:XM_002695257:250_cdna Constitutive 0 NULL GeneID:539365 18 GENE ZNF432 NULL zinc finger protein 432 EMBV3_30430 AGACTCACTCTGGGGTCCCTTTGGATCATATCAGAAGAATGTTCATGGCAGACACGTGCC Gene GeneID:497199|CFLAR:NM_001012281:70_cdna Constitutive 1 NULL GeneID:497199 2 GENE CFLAR FLIP CASP8 and FADD-like apoptosis regulator EMBV3_07746 GTTGAGGCAGATTTTCAACACAAGTTAAGAATGGGACCAGTAGGTTTCCCTGGGGCTCGG Gene BVT0102_386820 + 0 NULL GK000019.2:45459217-45493956 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38862 CTACGAAGAGTTTCAGGAGGGTGGCTGTTTTCCTTGTCCAGCGGGAGGATGTCCCAAAAT Gene GeneID:510772|PNLIPRP2:NM_001105355:30_cdna Constitutive 1 NULL GeneID:510772 26 GENE PNLIPRP2 MGC157384 PL-RP2 pancreatic lipase-related protein 2 EMBV3_38987 AGAAGTCTTTCAAGCTGAGCGGCTTCTCCTTCAAGAAGAACAAGAAGGAGGCAGGAGAGG Gene GeneID:613548|MARCKS:NM_001076276:10_cdna Constitutive 0 NULL GeneID:613548 9 GENE MARCKS MGC137530 myristoylated alanine-rich protein kinase C substrate EMBV3_01324 CAAAGCAGAGAGCTCTAAGAAATCCAAATGCCTCGGGGTTGGGTCGCGGGCTCTGAGCGG Gene GeneID:614647|LOC614647:XM_002687220:108_cdna Constitutive 0 NULL GeneID:614647 5 GENE LOC614647 NULL similar to male-enhanced antigen EMBV3_40578 AAGAAGCCTTCAGAGCCCAAAGCCATGCCAGACCTCAATGGGTACCAGATCCGGGTATAA Gene GeneID:615419|VASH1:XM_002691096:233_cdna Constitutive 0 NULL GeneID:615419 10 GENE VASH1 NULL vasohibin 1 EMBV3_21837 AAGGCCACCATTCAAGAAATTCAGCAAAGGGGGCGCCGGTGTGTGCTGAAAGACTGTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20918 CTCGGTGCTTTAGTGCAGGAAGCCCATTCCAGGAAGCGTGGGAATGCCATCTTTAGATTT Gene GeneID:509587|ATG16L1:XM_002686559:50_cdna UTR3_Alt 3 NULL GeneID:509587 3 GENE ATG16L1 NULL ATG16 autophagy related 16-like 1 (S. cerevisiae) EMBV3_13631 TGGGTGGTGCCCTGTTTGTGTGTAGTTGTCTCTTATGACAGAGTTGACACCCACTGAGCT Gene GeneID:537349|DZIP3:NM_001076092:101_cdna UTR3_Alt 4 NULL GeneID:537349 1 GENE DZIP3 MGC137859 DAZ interacting protein 3, zinc finger EMBV3_19924 GCGTCCTGAGAGCGTCGGGACCCGGAGCCGATACGTTCCTAAAACCTCACTGAGTTCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14565 TGACTGGTGTCTTTTGAAAAAGCCACATGTTTGTGCATTCATAACAGTCCACGAAACACC Gene GeneID:513751|DCTN6:NM_001075638:19_cdna Constitutive 0 NULL GeneID:513751 27 GENE DCTN6 MGC140696 dynactin 6 EMBV3_20842 ACCAAACTGAGAACCCTGTAGAACCAACTTTCACCGTGTCATTCCTCGGAACAAGAGGGG Gene GeneID:535192|LIPC:NM_001035410:97_cdna Constitutive 0 NULL GeneID:535192 10 GENE LIPC MGC128376 lipase, hepatic EMBV3_10175 CTGAGTTATCTGTGTGATTGATTTGTCTCACCAGGTCACTGCTCATGTGTAACAGTACTC Gene GeneID:541264|ZNF292:XM_002690198:52_cdna Constitutive 0 NULL GeneID:541264 9 GENE ZNF292 NULL zinc finger protein 292 EMBV3_22791 AGCCACCTACAGCCTGTTCAGCTACAGCATCCGCTACAGGCTCTCACCCAAGGTATGGGT Gene GeneID:100336849|LOC100336849:XM_002694189:675_cdna Constitutive 0 NULL GeneID:100336849 16 GENE LOC100336849 NULL taste receptor, type 1, member 3-like EMBV3_02221 TCACAAAGTAGTGTCTCCCCAACACCAAAATGAAGGAACCCTTGACAAAAGGGACCCCCC Gene BVT0102_151907 + 0 NULL GK000001.2:50558842-50659276 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19524 TGATCACTCAGGGTCCATCTCACTGGACGAGTTCAGGCATACTTGGAAGCTATTCAGCTC Gene GeneID:530344|PPEF2:XM_002688354:153_cdna Constitutive 0 NULL GeneID:530344 6 GENE PPEF2 NULL protein phosphatase, EF-hand calcium binding domain 2 EMBV3_23749 GGTCAATAGGTTTAGCTCCCAAGTCCCCTTTTCCCAGGGTTCCACCTAGTCTTTCTGAGA Gene BVT0102_259326 - 1 EMBV3_36729 GK000011.2:9646850-9683452 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08644 GGAGTTTGGTGCTTTGGAAAGTGTGAAAGCTGCTAGTGAACTCTGTTCTCCTCTATCAGG Gene GeneID:783608|LOC783608:XR_083582:93_cdna Constitutive 0 NULL GeneID:783608 1 PSEUDO LOC783608 NULL similar to Glycine cleavage system H protein, mitochondrial EMBV3_36798 CCCATTTTGAACAGCAGATGAACAGTCAAGTGTAGAGAAATGACAACCTGTCCAAGGAGG Gene GeneID:615147|PION:XM_002686771:82_cdna Constitutive 0 NULL GeneID:615147 4 GENE PION NULL pigeon homolog (Drosophila) EMBV3_08314 CAGGTTGTAAAAAGGCAGTAAAACGTTTGTGGTATAAGGAAATAAAAGAATGGAATTGGC Gene BVV0102_131211 + 0 NULL GK000023.2:6965164-6975319 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132053 TCONS_00132055 TCONS_00132059 TCONS_00132057 TCONS_00132058 TCONS_00132063 TCONS_00132062 TCONS_00132054 TCONS_00132061 1 XLOC_080696 Coding TCONS_00132059 XLOC_080696 Coding Coding GCLC 23:6922321-6967338 j TSS98887 4150 1 TCONS_00132059_5 638 0.00771084337349398 16 0.908165985427404 0.00420099687308798 0.00228005857926332 0.00347596679282035 0.00105057613900312 0.0046636407339698 0.00231584635407121 0.00361467253109802 0.00244142856636795 0.0033119338476335 0.000383676929112775 0.000101126260838392 4.17485199297637e-07 7.62301867168721e-05 0.00012836486105902 0.00128544958789535 0.00302546158220659 0.00122547358955295 0.000930897205681993 0.000630702006361276 0.0025823298077748 0.00327865695533325 0.000320085601670402 0.00240226754497514 0.00465520862913904 0.00269149769042552 0.000641908029916313 0.000818305721894906 2.7268948779283e-09 6.57351503120243e-05 0.000163281728119807 XM_005223236.1 GCLC PREDICTED: Bos taurus glutamate-cysteine ligase, catalytic subunit (GCLC), transcript variant X1, mRNA. 0.0 6130 100.00 0.818795180722892 NM_001498.3 GCLC Homo sapiens glutamate-cysteine ligase, catalytic subunit (GCLC), 0.0 2309 85.74 0.47855421686747 TCONS_00132059_5 sp|P48506|GSH1_HUMAN GSH1_HUMAN Glutamate--cysteine ligase catalytic subunit; 0.0 1264 94.03 0.996865203761755 1 coding 1 1 1 1 -0.106963844487438 0.5382543209142 -0.0481718266920543 0.36066859859339 CGCGCCCCGAGCCCGGAGCGGCCGCCGCCGGCCCCGAGGGCGGAGAGAGGGGGCGGCCATGGGGCTGCTGTCCCAGGGCTCGCCGCTGAGCTGGGAGGAGACCCAGCGCCACGCCGACCACGTGCGGCGGCACGGGATCCTCCAGTTCCTGCACATCTACCACGCCGTCAAGGACCGGCACAAGGACGTGCTCAAGTGGGGCGATGAGGTGGAGTACATGTTGGTGTCTTTTGATCATGAAAAGAAAAAAGCCCAACTGGTCCTGTCTGGAGAGGAACTTCTTGAAACTCTGCAAGAAAAGGGGGAAAGGACGAACCCAAACCATCCAACCCTTTGGAGACCAGAATATGGGAGCTACATGATCGAGGGGACACCCGGGCAGCCGTACGGTGGGACCATGTCTGAATTCAACACAGTTGAGGACAACATGAGGAAACGGCGCAAAGAAGCCACATCTCTCCTGGGGGAAAACCAGGCCCTCTGCACGATCACTTCCTTTCCCAGATTAGGCTGCCCTGGGTTCACGCTGCCCGAGTTCAAACCCAACCCGGTGGAAGGAGGAGCTTCCAAGTCCCTTTTCTTTCCTGATGAAGCCATCAACAAGCACCCGCGCTTCAGCACGCTCACCAGGAACATCCGGCACCGGAGGGGCGAGAAAGTGGTCATCAACGTGCCCATCTTTAAGGACAAGAACACCCCAGCTCCATTTATAGAGACTTTCCCTGAGGACGAGGAGGCCACGAAGGCCTCTAAGCCCGACCACATTTACATGGACGCCATGGGCTTCGGGATGGGCAACTGCTGCCTACAGGTAACGTTCCAAGCCTGCAGCATATCTGAGGCCAGATACCTTTACGATCAGTTGGCTACCATCTGCCCAATTGTCATGGCTTTGAGTGCTGCGTCGCCTTTTTACCGAGGCTACGTGTCAGACATTGATTGTCGCTGGGGCGTGATTTCCGCGTCTGTAGATGATAGAACTCGGGAGGAGAGAGGACTGGAGCCACTGAAGAACAACCACTATAGGATCAGTAAGTCCCGATACGATTCGATAGACAGTTACTTGTCTGAGTGTGGTGAGAAATACAATGACATTGACCTGACAAAAGACAAAGAAATCTACGAACAGCTGTTGCAGGAAGGCCTCGACCACCTGCTGGCCCAGCACGTGGCGCATCTCTTCATCAGAGACCCGCTGACTCTGTTTGAAGAGAAAATCCACCTGGATGATGCCAACGAGTCCGACCACTTTGAGAATATTCAGTCCACAAATTGGCAGACAATGCGATTCAAGCCTCCTCCTCCAAACTCTGACATTGGGTGGAGAGTGGAATTCCGGCCCATGGAGGTTCAGCTGACAGACTTCGAGAACTCCGCGTATGTGGTGTTCGTGGTGCTGCTCACCAGGGTGATCCTGTCCTACAAACTGGACTTTCTCATCCCGCTGTCCAAGGTTGATGAGAACATGAAGGTCGCCCAGAAGCGAGATGCCGTCCTGCAGGAACTGTTTTATTTCAGGAAAGACATTTGCAAAGCAGGTGGCAACGCCGTGGTGGACGGCTGCGGCAAGGCCGCGGGCAGGGCGGAGCCAGCGGCGGAGGAGTACGCGCTCATGACCATCGACACCATCATCAACGGCAAGGAAGGCGTGTTCCCCGGGCTGATCCCCGTCCTGAACTCCTACCTGGAGAGCATGGAGGTGGACGTGGACACCAGGTGCAGCATTCTGAACTACCTGAAGCTCATCAAGAAGAGGGCGTCCGGAGAATTAATGACAGTTGCCAAATGGATGAGGGAGTTTATCGCAAAGCATCCCGACTACAAGCAGGACAGTGTAATAACTGACCAGATGAACTATAGCCTTCTTCTAAAGTGTAATCAAATCGCAAACGAATCGTGTGAGTGCCCAGAGTTACTCGGACCAGCGTTTAGGAAAGTCAGGTACAGTGGAAGTAAAACCGACTCTTCCACTTAGACACCCTGCAGGACGAGAAGCCCTGCCCCGCGTTCCCGAAGAACTGACGGCTGGACCGGCTGTGTGCATTGTGTGAGGAGCGGGGGGGTCATGGCGCGCTGCACTGGCAGAGGCGGGATTAAGCAGACCTAGAGTTTATACAGTGTACATGTACATACTAAAGTATTTTTATGATTAACAATGTATTTTAATAACATTGTACCTAAGGTTCTCATGAGCTGGCTTGTACATTTTTCAATTCTGACTCTGGAGCAGCTGCTGTCTGAAGCAGTTTTGTAAATGTAACTTACCGGTAACTGTACTATATCTGCATTCCAGAGTTTAAAATGTTTACTGTAAATTTTGGCTTTTTTTTTTTTTTTTAAGGCTTTAACCTGGTACCTGATTCACTGAAAATTCTGTCACTTTACCTTGAAAACAGATTGTCCTGCTCATTTTCTTTGCATCATCTCCTTTGGCATATATGTAAAATCAATTTTGAATCCACCAAAGTGCTTCAGGGGGAAGCTTGGGGTTCTGGCGCCTTATCTGTGACAATTCTCTCCTAATTTGAATAGCTAATCCCTTGGTAACCCTGTCCCAGGCTTTCCCTACTAAAACAAAACCCACTGAACTGATGGTACTTTTTATCCACATTTGCTAATTTTGGTGTTAAGTTTAAAGACGACTCTGGAAGAAGAAAGACTCTGAGTTCACATGTAGTGATTATTGGGGTTTTTTTTTGTTTTTTTTTTAAGGACAAAAATAGGGAGAATCGTTTTTCTCCTTGTACATAACAAAACTAATATCAAAAATGCCACCAGCTCTTCTCTTGTGGCCCCTGTTTTTTTTCTGATTGCTGCTGTCTACTTAAATTTTCAAATCAAATGCAGCTGCTGAAGTTTTTGTTTTGTTACTTTTCCTCTGGTTTCCAATAAGCATATTACAGACATTCTTCGAAAAGCCATTCATTCTAGATTTTACCCAAGGAATATTTTGCATAGCTGCTCTGCAAAAATCATGATATGCACTAAGTTTTGTGAATCAGGACCCTAAATGTTTAATTGTAAATAATTTAAGTTGCACACAATTGTTAGAGCTTTTTTGTTGACATTTTTCTCTGATTAATTAAATGTCTTAACTACTTCTGAAATAACTATGTATAGTAGATTATGCAAACCTTTACAGGCATAAATATTTAAACTGTCATGTTCATTTTAAGAAATTGCCATAAAGCTTCAGCTAAGCCTGTTCATGTATAAATATTAGAGTTTGTGCTATATTTCTTACATGCATTTTGGAGGATAAAAGAATGCCTGTTTTTCCTTTGCAATTTGCTTATGTAAATTCAGGTTGTAAAAAGGCAGTAAAACGTTTGTGGTATAAGGAAATAAAAGAATGGAATTGGCATTGTGAAAGCTCTCGAAAGTGAGTTCTACAACTAATCGGATGGTGGTGGATTGTTTTTTTAATTAGCCCAAATACGCCAGAAAATGATTTCTTCATCATGCTCCATCCTCAGCGCTTTCTAGAAAGAAGCACAGTGATGAGAACAGATGCCTGACCTCCCCAGGAGCCCTCAGCCCTGTGGGGAGGGGAGCAGTGACCGCCGGACATGAATTTTCCTTTTATCCCAAACCATCACCGTGCTGAGTCAGTGATCACATAGTGAATTACATGCAAGTAACTCAGGTGCTGTGTGCACAGTGGTGAATCCACTCAGACTGGATCAGCAGGCCCGGCAGACAGCCATTGCCCACACATCCCTCACCTACCCAACCCCTAGTTCATCTGGCCCGTCCACTTTTCTCAGCTTCACCTGCTGGTCTGCTTTTATCTATCTGAATGATCCCAGGGCAGGATCACTGTCAAATGAATCTGCACACACGTCTGAAGTGCAGCCCTGGCTCAGTGGGCCTGGGATGGGGGCCCACAGGCAACGCTGATGCTGCTGGTCTGTGGACCATGTTGGGTAACAAGGACTTAGATGACTCCTGTACCTCAGACACACATCCGTTCTAAGTCGCAGCTGATACTGATCTTTCATGTGTATATGAACATCAAATAGCACTGTCTCTGTCCAAGACAAAGCATCACCTTTTCCTCCTGAACACAGCTGAGGGTTCAGGCTTTGGTAGCAAAACAGTAAACAGTGAGATAAGCAAGGAGTGCCTTGTCCTTGGTGGAAATAGCATT EMBV3_14640 TCTGAAGAGAATGAAGTAGATGACACTGAGAATTTACAATGGGAATGATTTTACCAACCA Variant GeneID:531017|AHSA2:NM_001102134:104_cdna 435^549 2 EMBV3_23099 GeneID:531017 11 GENE AHSA2 MGC152531 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) EMBV3_38267 TGAAAAACAGTTTACCGATCTCAAGGATCAAGTGAAAAGCTTTTGTTATATGATACAGTA Variant GeneID:514432|BRMS1L:NM_001083428:20_cdna 256^463 3 EMBV3_25308 GeneID:514432 21 GENE BRMS1L MGC143052 breast cancer metastasis-suppressor 1-like EMBV3_17536 ACGGACTGAACCTGGGTCTCCCGTTTTGCAGGAGGATTCTTTTCATTGAGCCACCATGCA Gene BVV0102_023740 + 0 NULL GK000027.2:34774830-34893837 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40430 TGAATATCAGCAGCATGGCAGGAGGGGTTCCAATGCAGAAGATGGCAGCCTATGGCTCAT Gene GeneID:515710|HSD17B2:NM_001075726:44_cdna Constitutive 0 NULL GeneID:515710 18 GENE HSD17B2 NULL hydroxysteroid (17-beta) dehydrogenase 2 EMBV3_30881 CACCAAGCAAAGAAAGAAAAATGTTTTGAGCCCACGGCCGGCAATCCCACTCTCCCTCCT Variant GeneID:506290|IQCK:XM_002697981:43_cdna 487^617 2 EMBV3_36033 GeneID:506290 25 GENE IQCK NULL IQ motif containing K EMBV3_12056 ATGTGAGGCCGGACTTGCTTCCATCCACTTTGATTGTGAGGTGTTTTCGTGCTGACTCGG Gene BVV0102_130077 + 0 NULL GK000014.2:33065712-33074313 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09871 ATACCAACCATGTGACACAGTAACACTGCAGAAAATAAATAACCAACAGGTTTCTCTGAC Gene BVT0102_375753 - 1 EMBV3_04484 GK000021.2:41686536-41692841 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119394 TCONS_00119406 TCONS_00119395 TCONS_00119407 TCONS_00119391 TCONS_00119396 TCONS_00119397 TCONS_00119405 TCONS_00119399 TCONS_00119400 TCONS_00119392 TCONS_00119404 1 XLOC_072894 Coding TCONS_00119391 XLOC_072894 Coding Coding G2E3 21:41612758-41690137 j TSS89426 6482 1 TCONS_00119391_4 728 0.0544585004628201 15 0.916423272764869 1.12773880230682e-124 2.00994148679408e-132 4.7526142295161e-139 5.25032147191022e-86 4.45785964804698e-84 9.35884519082104e-12 0 4.80268927374312e-12 3.92989860188084e-31 2.92365901056239e-19 1.23529418594552e-149 9.01553776853479e-19 2.95595728769287e-147 1.67063188055746e-142 3.18383883118104e-127 6.1791131386688e-10 0.000793334240914297 0.00223454353692029 1.3600378128804e-208 0 6.43826972367825e-115 0.00135150992028524 0.000895673365162639 0.00138345004492959 2.7223133124194e-125 1.55479735038189e-214 1.81320751326893e-159 2.93912019279246e-08 0.000138505450119702 7.38952697333789e-16 XM_005222040.1 G2E3 PREDICTED: Bos taurus G2/M-phase specific E3 ubiquitin protein ligase (G2E3), transcript variant X1, mRNA. 0.0 8069 100.00 0.690064794816415 NM_017769.3 G2E3 Homo sapiens G2/M-phase specific E3 ubiquitin protein ligase (G2E3), mRNA. 0.0 3366 86.39 0.436285097192225 TCONS_00119391_4 sp|Q7L622|G2E3_HUMAN G2E3_HUMAN G2/M phase-specific E3 ubiquitin-protein ligase; 0.0 1292 86.65 0.964285714285714 3 coding 0 0 0 0 -0.0771373099097059 0.719937873649523 0.0346140301055548 0.525044327742835 GGGAGAATTTGAATCGTGTGGGCCGTTTGGTGTAGCAGCTAGAGGATGGCGTGTGGCGCAGCGCGGGAAGGGAAAAGTGACACGGCCTCTCTGGAACTTCTGCCCAGCGCGCCTCGTAAAATGAATGAAAGTAAACCTGGAGGCTCACAGAATTCTACTTGTGTTTTCTGTCGAAAAAATGATGACTGTCCTATTAAATATGGAGAAAAGAAAACTAATGAGAAATGGAATCTCACTGTACATTACTATTGTTTGTTGATGTCAAGTGGAATTTGGCAGAGGGGTAAAGAAGAAGAAGGAGTTTATGGTTTTCTAATAGAAGATATCAGGAAAGAAGTGACTAGGGCTTCTAAACTGAAATGCTCTGTTTGCAAGAAAACGGGTGCTTCAATTGGGTGTGTCGCACCCCGATGTAAACGAAGTTATCATTTCCCATGTGGACTTCAGAGAGAATGTATTTTCCAGTTCACTGGCAATTTTGCGTCATTTTGTTGGAAACATCGACCTGTTCAAATAATTACATCTAATAATTGTAGAGACTCCTTACTGTGCACCATTTGCTTGGAATTTATAGAGCCTATTCCAACTTACAGCGTGTTACGAAGTCCTTGTTGTAAGAATGCTTGGTTTCATAGAGACTGTTTGCAGGTGCAAGCAATAAATGCAGGAGTGTTTTTCTTTAGGTGCACTTTATGCAATAATAGTGATATATTTCAGAAAGAGATGTTGAGAATGGGAATTCATATTCCTGAAAAAGATGCATCTTGGGAATTAGAGGAAAATGCTTATCAAGAGCTTCTGCAGCACTATGAGCATTGTGACGTCCGAAGATGTCGTTGCAAAGAAGGGCGAGACTATAATGTGCCTGATAGCAAATGGGAAATAAAGCGCTGTCAGTGTTGTGGTTCTAGCGGAACACATTTAGCCTGTTCCTCACTACAGTCATGGGAACAAAATTGGGAATGTTGCGAATGTAGAAGTATTCTCTACAGTGCAGGTGAATTCCAGAAAGCCAAAAAACATGCATTACCCAACACTAATGTGGGAATAAATGATTGTTTGTTGGAGGAGTCTTCACCTAAATTACCCAGACAGTCACCTGGAGACCAGTGTAAAGATCTGCTGAGGCAAGGCAGCAAATTTAGAAGAGATATCTCGACTCTAATTATAGAGTTAGGATTCCAAGTTAAGAAAAGGCCTAAAAAAGTATTTATCAACAAAGCCAATTTCTGGAATAGTGCCTTAGATGGATTCAGAAATCAAAACTTTAATCCTTCATATACAATTGAAATAGTGTATGTTAATGAAAATGATCATTTTGGAAGAGAGCAGCCTGGATCAAAGCAAGAATTCCTAAGTCTCTTAATGCAGCAACTTGAGAACTCATCATTGTTTGAAGGGTCCTTGTCAAAGAACTTGTCTTTAAATTCTCAAGCTCTGAAAGAGAACCTTTACTATGAAGCTGGCAAAATGGTTGCCATTTCTTTGGTTCATGGTGGTCCTTCACCTGGTTTCTTTTCTCAGACCTTATTTAACTGCCTTGCTTATGGACCAGAAAATACCCAACCAATTGTAGACGATGTTTCAGACTTTGATGTGGCACAGATTATGATCAGGATAAATACTGCAGCAACTGTGGATGACTTAAACTCTTTAATACATGACTATTATAAGTACCTAGAGTTTATTGGATGTCTAAGACTTATAACATCAATAAGTGATAAATATATGTTGGCAAAAGACGTACTTGTTTATCATGTAATTAAAAGAGTCCAAGCACCTTTTGAGAGTTTTAAACAGGGTCTGAAAACTCTTGGTGTTTTGGAGAAAATTCAGACTTACCCAGAAGCATTTTTTCACATCTTCTGTCATAAACCTGAGAATCTTTCTGCAAAAATACTTAGTGATCTTTTTACAGTACACACATTGTCTGATGTACAGACTTTGGGGTTTTGGAATAGTTACTTACAGGCTGTTGAGGATGGTAAATCTACAGTAACAATGGAAGACATTCTTATTTTTGCTACTGGTTGCAAGTCCATTCCACCTGCTGGATTTAAACCCAATCCTTCAATTGAGTGCCTTCATATGGATTTTCCTGTAGGAAACAAGTGTGATAACTGTTTAGCTCTTCCTATCACCAGTACATATAAAGAATTTCAAGAAAGTATGGACTTCGCCATAAAAAACACTCTAAGATTAGAAAAAGAAGAAAATTCTCACTTCATTTGACATCACCTGTTTTGAACAAAGGGATGCTTCTTTAAAAGCTGCTGTTGGTACTTTTGTTTCAGAAATCTTTCCGTCATCACTTGTGCAAACTTGGCCCAGTAAAATTTATAATATGAACATAAAGGATTGTTTTGGCCACCTAAGCTAAAAAGGATTTTTTGTTAAGGTGTACCAGTGAAAATTAATATTTTTCTATTTTTCTTGATATACATGCTTTCTAAACCTCAATATAAATACTTTTAGAATGGCTGTACAGTCTTTCTTCAAGTATAATATATGCTGTATATAAGCAGAAAACTTGTGCTCACTTTATGTAAATTAGGATTAGCTATAGGATGCCACAATGATTTTTCTGGTTTAATTATGCAATTTTCAAATTATTACTTATTTTAAAGCATTAAGTAGGAAATGAGTGATTTTTTTTTTTTTTTTTATAAATCAAAGGCATATATTTTGGAGTATGTGTTATATGTATCCTCTTCTAGGATGGCACTAAATTAGTTGTTAAAAAATGTTTTTAGATCATTGAGTTATATTAAAATAGATCCACACTGCTGTTAGATTATGCCTTAAGAGATTTATTATATAAGAAAGCAGAATTGCACAAATGCTCAAATATCTATGGACATTCCATAGTCTTAAAACACTTCTGAGGTGAGTTAAAGTATAGTTGAAAATCTCTCAAGTGTCTTCTTTAAAGCCTTGGCTTTAATCATAAGATTTTGTTTTTCTTTGTATCCCATGTGTGGTATTAAACCACAGTGTATATGATCCACAGTTTAAGTTATCTGAATAGAATGATCTCTGTGGATTGCCTTTTGGTAGGTTTGGCTATTTAACAGTTATTTATTATCAGTATGGTTGTTTGATAGGTAAGCTGGAACCATTACATTATACAGCTATTTTCTTTACTTTTGAAAGATACCTGTATATATAAACAGTGTAGAAATATGTAAAAAGAACTACAAAGAATGAAAAACCCATGCTAATCTCACCATGCAGAAATAACTGTCCCTGTATATCCTTTTATTAATATAAACTCTTACATTTCCTTTCTTTTTTAACTTTATTTTCTTCTAAAAGCCAAATACCTAGAAATAAAAAGATTATGCAATAACAATTTGAAGATACATAATCTGACAATTTTACCACCATATCTGTACTTTTACAAAAGAAGAAATTGGAGAAATCTAATGTTCCTAATCTGTTATATAATATAAATGGGTTTTTCACCAAAGTAAATCGTATGAGAGATAAATTGCTTGTTTTTAAGCACATTTTTTTCTAGCTATGCAAAGCAGGTATCAGTCATCATTTTCTCATCCTCTCTGAGACACGTCTGTAAATTACTGATATTTTTAAAGACAAATGACAGGATTGGTGTGATACTGGTAATATAAAACATAGTCCTAGTATAATTTGTTTTGTTACATTTACTAAAAGTGAAACTTTAACTTGAAGGTTTTAAAACATTAAGGCATTTTTTGTCTTGTATTGAATTCTATTAAATTATCAAAAGTAATTAAAGGATCAGTTATCCAAAAAGAAGTTTAAACTCACCATACAGGTTTTATTCCAAATGTGTTGATAAACTGGACATTTTATTTGTTAACCTACCTAGTTTTTATAAAATTTTAAAAGCCGTTAAATCAATACAAACCAGAAAACCTAATTCAAGCTATTTTCTGGTTATTTGTAGTTTGAATTCATTTAATTACAGTCATAATTAAAGCTGTTAAACGCTCACATGCTTTTGAGGTGGGGGCTGCTGATAGGGGGCAGTGTGCTTGTGTTGGCTATGATTAAAAACAGTATTTCAGTTCCTTTTATGTGTAGACAGGGCCTTAGGGATAAGGTGTTTAAATAATAATTTGGGATATTCATGTTTTAAAGGGAGGTATAAATATTCATATTAGAAAATATTTTCTGGTTTTAAGGATGTTCATCAGTATGGTTTTAGATTAATCTTTGAAAATATGTCAGAGAAACCTGTTGGTTATTTATTTTCTGCAGTGTTACTGTGTCACATGGTTGGTATTGTTTTTTTTCTATTGTTATAGCCAATACAGTTTTTATTGCATTTGATTTTTCTAAAGTAATTATGCTATAAACCTTTATAAATGTGAATATGTATTTCTTAAGTATTTCAATTGTCTAAATGCCATGTATGTTCAAGCTTGTTCTCTGTTACTCTCAATATCAAGAAAAACCATAAATTCTCCTCTTACCTATCTGCTGTTAATGGTCTTAGTTTAGTTTTCTATTCATTTTTTTTTTAAACAATTAAAAATTTTTTGGTGTGGGAACTTCATCTGAAGGCATTTTATACAGTTCTCTACTATTCTTGTACATAGTCATTTTACTATTATTTAGGGTATTTAGGGTAAAGATACCTTAAAATATCTCTTCAGAAATTAGCTCCTTTCTTTATACTCTGTAATATTTAATTTCCATATTATAAATTAGACATTATTTGTTTGGGTCAAGTAGAAAGCTTACGTTTGATTACTAACCTGAGAATTCACTTTGGCTTCTACATCATTTCAGGCTTGTAATTTTTTTCTCCTAATTATATGGAAGCTGTTGAAACTTTTTTACTCAATACTGAATGCACAGTAGAGTGTCATAGGTAAGGTTTTTTTAAGATAAGCCTTTTAAAACTGTAAAAGGCAAGTGACTTGGGCTTTTACATTCAGTCATTATAAGAAAATTATTAGAACAAGATCCTTTTTATAAATTTGTCTTATATATATATATATATAGTGATTATCACATGCTTTGTTGTCACTTTTACAATAAGCTGTTGATCTAGGTTTTATGCTCTAAGTGATCCAGTGTAAAACATAAAAATGTATTGATGGATTTCTTGAATATGTATTACTCACAGTTTACGAAAATTTGAATTGCCTTGAAGAGATCCCATTTTCAAGTTCTCATGTTGACTTTTACCTTCAAATTGCCAAACATACTCCAGTATCTACTGTATGCCAGGTATTATGTTATGTGCTAGTTTATGTCAGCCTAATTTCCCTTTTTTTTTAAGGCTTCAGAACAACCAAAAACATGACACATATAATGAAGTTTTGTAAATAAATATGTTTATGCTACTAAATGTGAAGCTCTTACATAAAGTAAATTAAGTAACTTGTTAGGATTTAACAAGGTTAAGATTCTGACAGTACTGGGTAAATAACAAGATCCTTTCCTCTCCACATTTGGTAGATCCTGCTAGCAGCTGTTGGCTAACATTTAGGAACCTCTTGAATGAGATGGTGTGAGATATTCTGTGTTAAAATTATCTATTCCTTAATGTAAAATAATAGTTTGCAGAATAAATGTATTATTTAAGTAAAAAATCTGGATAGGCAGAGTCAGTTAAAAGACTAAAACATATTAGGTTAATTAGCACTCGTAACAGCCCATAGTTTAATTCTTTTTTTCCAGTAACAGAATACCTTACTCAGTCTTAGCCTTATACGAAGTATTTGTTTATTGCCACTCTTCTGTGGGATTTTTTTAAGTGTTTATTGACTGTGTTACAGAATTGCTTCTGTTTTATGTTTTGATTTTTTGGCCATGAGGCATGTGGGATCTTAGCTCCCTGACCAGGGATGGAGCCCTGTATTGGAAGGTGAAGTCTTAACCACTGGACCATTGGGCAGGTTCTGGGACATACTTTTCTATACATGCTCCACACTCTGTGCACTCCTTGGTTTTGTGTGTTACTCACTCGTGTCCAACTCTTTGCAACCCCAGGGTCTGTAGCCCGCCAAGCTCCTCTGTCCATGGAGTTTCCCAGACAAGAATACTGAAGTTGGTTGCCATTTCCTTCTCCAGGGGATCTTCCTGACCCAGGAATCGAACCTGAGTCTCTTAATATCCTGCTTTGGCAGGCAGATTCCTTACCACTAGTGCCACCTGGCCAACATGGGGACATGCTCCTTCACTAAGGCATGAAATCCTTCCATTCACTGTAACATCTTGTGCTGAAAAATGTGTCCCAAGGTGTCTCAGGACTATTTCCTTGGTTAGGACAGTTTTTATAATTTCAAATGTATATACTGTACATAAATGTTAAACAGGTCTGAGTGTTTTATATCAATATGACTCTATTTGGGGAGGTATATGCTGGAGCTGAACTAGTTAGATGATAGATTTGCATTGAAAGTAGAAGTGCCCAATTGATCAAGATTGGGCTCTCATATTGAAGGGAAAGCCTGTTTATTTTATATTCCATAAGACAAAATAAG EMBV3_15416 AACCTCGAGGCGTACAGGCTGTCGTCACAGCAGTTCCACGAGGCAGCCACGAAGATTGAG Gene GeneID:615934|CHCHD6:NM_001076402:41_cdna Constitutive 0 NULL GeneID:615934 22 GENE CHCHD6 NULL coiled-coil-helix-coiled-coil-helix domain containing 6 EMBV3_27710 AGTGCAGTGTTACTCCAGTGGCATGAAAAGGATCTGATAGTCTATGCCTTTGTTCACGAG Variant GeneID:613421|ARPC5L:NM_001034737:47_cdna 478^727 1 EMBV3_19314 GeneID:613421 11 GENE ARPC5L NULL actin related protein 2/3 complex, subunit 5-like EMBV3_24594 AGTGTCCGTGTAACCTTTTTAAGACTTGGTTTGATGTGTGGACGTTGTCTCCGAGGCCCC Gene GeneID:613725|PCBP3:NM_001076284:72_cdna Constitutive 0 NULL GeneID:613725 1 GENE PCBP3 MGC139492 alpha-CP3 poly(rC) binding protein 3 EMBV3_21208 TCCTGCCTCATTCAAAGGGAGAACACCTGTGCCAAATCCCAGCTGCCTCTCAAAGCTACA Gene BVT0102_031067 + 0 NULL GK000019.2:18811373-18813555 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092498 TCONS_00092515 TCONS_00092520 TCONS_00092509 TCONS_00092512 TCONS_00092518 1 XLOC_056910 Coding TCONS_00092520 XLOC_056910 NonCoding Coding MIR365-2 19:18693569-18813285 x TSS69595 1338 1 TCONS_00092520_2 114 0.381913303437967 4 0.988856868395773 2.7960584742262e-06 7.86577342122061e-26 6.04625856993328e-19 5.51652368702051e-23 1.80328519399776e-10 1.569808559623e-16 2.75520900485854e-05 2.33223653102153e-06 2.66738455660319e-24 8.10624925514377e-26 7.77432440585312e-51 0 6.80076752710755e-08 0.00101419094542183 4.15368810151691e-05 0.00305977566224202 0.000769295806914567 0.000375047648954782 8.33211495205106e-20 0.000622475841599689 0.000723389714519852 0.00118874487108423 0.00029655307930571 0.000714187131739834 3.72263229402789e-16 4.94312356058249e-05 6.04135435028346e-05 0.000183125481606552 0.000266197514964442 0.000102191389034369 XR_228621.1 LOC101902970 PREDICTED: Bos taurus uncharacterized LOC101902970 (LOC101902970), 0.0 1016 99.13 0.426008968609865 0 noncoding 0 0 0 0 -0.866684902599058 0.0134447805834767 -0.0511653071838153 0.328845075990484 AAGGATTGATCCCATGCCCCCTGCATTGGAAGGCGATGTCCCAGCCACTGGACCCCCCAGGGAAGTCCCTTTGGAAGTGCTGCGGTGAGGATCCCTGCCGTCCACACGGGAGAGATGCCGATGCCGTCCAGCGGAAGATCACTGGGGCACACCTGGCGTGGAACTATGTTTTGGGATAAAGAATGAAGAAAACACTCTGGAACAGGAGGGTGATGTGAAGACTGAAGGAAGAATAGCATACAAAGGTTTGGGCCGGCTCCCAACATACTGTCTTCCCCTGTCCAAGCAGCTTCCCCCTTGCCCTCAGACCCCTAGAGCTGGGCCAGGCTCCCTGGGAGACTCTGAGGACTTGGGCAGTGGAGAATTCCTCCCTCTCGGAGGGGCAGGTGGAGTTGGGGTGTGGGGGCACAGGCCTCACTGCCCAGTGAGCTCTGCACCGTCTTCTCACACGCCAGGGTCCTGCCTCATTCAAAGGGAGAACACCTGTGCCAAATCCCAGCTGCCTCTCAAAGCTACATTATAGCAGCTGTTACCTTGCTACGACTTTTGGCCCTAACCAAGACCATCATGCATATACTCCACCAGCAAAGGCCAAACTGTCGGGCTTCCCTGGTGGCTCAGTGAAAAAGAATCCGCGTGCCGATGCAGAGGACACAGGTTCAGTCCTTGATCCAGGAAGAGCCCACACGCTGCAGAGCAACTAAGCCCACGTGCCACAACCATTGAGCCTACGCCTAAAGCCCAGGAACTACTACTGCCGAAGCCTGTGCACCCTAGAGCCCAAGCTCCGTGTCAAGAGAAGCCACCACGATGAGAAACCCGAGCACCAGCACTGGAGAGGAGTCCCCGCGTAGCAATGAAGACCCAGCACCGCCAAAAAAAAATTTTAAACGAAATAAAATTTTTTTTAAAAAGCCAAACCGTCTCTGCACACTAGGATCCAAACCTCCTGAATCCCTCAGCAACATGACCACATCCGAAGAAGCCCTAGCCTTCAGTCTGCACAGCCGTGGTGTGAGGGGGTCCCACGGTCTGTATGCCGCGGCCCCAGTGCAGAAGAACAGACAAGGAGGACAAAGAGGGTCAGCTCACCACTTAGCAACCGAGAAGCTCAGGCAAGCTTCTAAACCCTTCTGTGCTCCAAGATCAGGGTAACGAGAGACCGCCCTGGTGGCTAAGACTCTGTGCCCCTAATGCAGGGGGCCTGGGTTCAATCCCTGGTCAGGGAACTAGATCCTGTGCACTACAACAAAAGATCCCACATGCTGCACCTAAGACTTGGTGCAGCCAAATAAATACTTAAAAAAAAAATCAGTGTAACTACCTATTTCATGGGGT TCONS_00095464 r 3' 271 TCONS_00092485 s 3' 84053 EMBV3_01689 CTCAAACATCACCTGCCAAGATGTCTGTGACACTACCCTCAGTGAACCTGGAAGACTGCT Gene GeneID:533397|KIAA0586:XR_082701:326_cdna Constitutive 0 NULL GeneID:533397 10 GENE KIAA0586 NULL KIAA0586 EMBV3_10487 TATCCTGCACCATGAAAACAGCACAGGGCATTTCCAGAGACATGGAGAGATGCTCACTGG Gene GeneID:100337317|LOC100337317:XM_002683856:3_cdna Constitutive 0 NULL GeneID:100337317 X GENE LOC100337317 NULL killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1-like EMBV3_36713 CGGCAACCACTGCGAGTTCTGCTTCGCCAGAGAGAAGATTGGCCCATGCACAAGCTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08391 TCCCTTCACCCAAGCCCCTCCATCAGGGAATGTTCTCGCGTTTGAACACCACGAAGGTCA Gene BVT0102_179906 - 0 NULL GK000024.2:21531009-21687845 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138608 TCONS_00138611 TCONS_00138614 TCONS_00138613 1 XLOC_084692 NonCoding TCONS_00138611 XLOC_084692 NonCoding NonCoding GALNT1 24:21641073-21692413 x TSS103829 1591 1 TCONS_00138611_2 105 0.262727844123193 3 0.969068349597772 0.00157739560670658 0.00164748227402776 0.00136389154368002 0.000761368156974857 0.00248566267364863 0.000916537678368664 0.000639137208915927 0.000314468149384217 0.00140636014714397 0.000166953964109675 0 7.19169815694998e-05 0.000245551413969053 0.000170382498654668 0.000599222328219217 1.15559832893158e-10 0 0 0.000987826798987659 0.000468069368643513 0.000221143215925341 6.18020180278466e-11 0 3.30985742453125e-09 0.000892322571056944 0.00208732780059788 0.000535034287213964 0 2.71030267628877e-11 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 4e-91 340 95.31 0.133249528598366 0 noncoding 1 0 0 0 -0.436315089500112 0.0112934561111881 0.0128774424982206 0.781889369089404 TTGCCAAAGTGTTGCTGCTGCTAAGTCACTTCAGTCATGTCTGACTCTGTGCAACCCCATAGAAGGCAGCCCACCAGGCTCCCCTGTCCTTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTCGCGACCCCATGGACTGCAGCCCACCAGGCCAAAGTGTTATAACTCTGTAAATTGTAGATGACTGATAATGCAAAATGATTTTTGTCTAAAGACATGCAAATAACTTTTCATGTTATTTGGGAGCTAGAGAGAGAAGCTCCCTCCGCCCCTCACCCCCACCTCAACCCGGGAGAATTTTGGATCCACTTGCAGGACCTCCCGCAGGCACTTTGCTCTCTCGAGATTCTGCCGGATCTGGCTTCCTCTGGGAAGACCGGCGAAGGTAGCGGTGCCTTGGGTAGGACTCAGCCGTCTCTGAGCCTCCTCTCCACCTTGCTGCATTCCAGCCTGGCCTCTGCCTGCTCCTCCATCAGGACCCCACTTACAACCGCCAGCCCTCCTTCACCAAGCCCACCCTTGGCCCTCAGGTGACCTTCGTGGTGTTCAAACGCGAGAACATTCCCTGATGGAGGGGCTTGGGTGAAGGGACCCGCTCTCCCCTCGCAGGGTGCTGGCTGTTGGGTTGTTTTTTCAACGAGAAAGCAACACGTTGACGCTATTCTTCAGAGGAAAGACTCCAAGAGTAGGAGTGATATCAACTGGGACGAATTCGAGACACCTCACAGCTGCTGGTAGCAACAACTGGACCCAAGAATGTGGATTGCTATTTTCAACTGGAGGCAGAACTCTGACGGGCCGTCTGTGCAGTAAGCCAAGTCGTGAGAGCCCCGCTACAGCCTAACTCCTCCTCTGCCCAGTTCTGCCATCTCCCTTTTCACAGGTGTTGATCTAAAGAGTGCTCCCTAATAAACATCCTGAACGCTAAGCTTGACCTCAGAGTAGAGCCTGCCTCCGAGAAAACCCAGCCTGCTTGCAAAATGCTCCAGGGGTTTTTAAAACTTTACACTGGTAACTGGTTCTTTCAAAGTATCATAAATCAACTCAAGCACCTTAATTTCTAATCAAACATTTGCTTTTTGAAAAACCGTTGTGGTAGACTGTATAGGTTACACACAGTCTGCCAAAAGCCATTCCCACACGCTGCCTCCCAGCTACATCATACCATAAAGACTGGAAAAGCAAATGCCTGCTTTTCCAGCCTCTCACTCTGAGAAGTAGTTCTAGCCCGTGAGACCTAGCAAAGACTGCTGTGGAGGATCCAGGAAAAGCTTTGGCTTTCCTGATAAAGAGGAATTCAAGGAGCAGCATACCAGTCATCTTTTCTTCTTGCCTTGATCTGGGAGTGACACCTTCTAGTGGCCACAAGAAAACGGACAAGAATACTGCTGCAATGTTACCCCTGACAGCACTGTGTCACTGAATCCACATCAGAAGCCACTTACCTCCAGACTTAAGGGAAAAAACCCACTATTTGTTCATGCTACTATAAATAGGTTTCTGTTACCTATTTAAATATAC TCONS_00139866 TCONS_00139867 r 3' 2803 TCONS_00139866 r 3' 42988 EMBV3_40004 GATGGTACGAAATAAACTTTTACGATAACGAATTATCAGAGAACATTGAAGTTTCAAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21355 TGGCTGAGCAAGCAGTCCAGGCCATCAACAAACTGAACCCCAAGCCCAAATTCTTTGTTC Gene GeneID:100336860|LOC100336860:XM_002698003:106_cdna Constitutive 0 NULL GeneID:100336860 25 GENE LOC100336860 NULL hypothetical protein LOC100336860 EMBV3_07822 ATGAGCTGCAAGAAGATGCTCGGACTCGAGCACCAAGACTTCAGATGCTGCAACGACCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06204 CCTATTGAGTTACCTGGTCAGCACTGTGATCTTTTTTTCTCTCCAAAGGACCTGCGTTGG Gene GeneID:533538|SGMS1:XM_002698368:152_cdna Constitutive 4 NULL GeneID:533538 26 GENE SGMS1 NULL sphingomyelin synthase 1 EMBV3_36681 TATCTCGAGTGACAGCTCCTTCCACCTGCAGAAATCCTCTGTGCAAACATCAGACTCAGC Gene GeneID:100335339|LOC100335339:XM_002707862:105_cdna Constitutive 0 NULL GeneID:100335339 10 GENE LOC100335339 NULL hCG2039694-like EMBV3_29538 CTCCTGCCGTGAGAGCCATGGGGTCTGCGTGATTATTGGGTTAATCATTGGTGTCCAACT Gene GeneID:510551|ADH6:NM_001046057:5_cdna Constitutive 0 NULL GeneID:510551 6 GENE ADH6 MGC137543 alcohol dehydrogenase 6 (class V) EMBV3_32265 ACGCAAGAGAAAAATCCACTGCCTTCGAAAGAAATGATTGAACAGAAGCAAGCAGGCGAG Gene GeneID:100138290|LOC100138290:XM_002693057:353_cdna Constitutive 0 NULL GeneID:100138290 15 GENE LOC100138290 NULL similar to thymosin, beta 4 EMBV3_39519 ACGGAGGGAGCGGGGCAGCTTCCGGAAAAGGTCATAAGAAGCTGGCCTGGGTGCAGTAAG Variant GeneID:532940|CCDC28A:XM_002690280:37_cdna 199^423 2 EMBV3_33581 GeneID:532940 9 GENE CCDC28A NULL coiled-coil domain containing 28A EMBV3_28348 ACAGAACTCACAGATGCAGACAGCTACTTCCCATCCTCCTGGGACTTGGTTGATACCCTT Gene GeneID:407767|HMGCS1:XM_002696363:39_cdna UTR3_Alt 3 NULL GeneID:407767 20 GENE HMGCS1 NULL 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) EMBV3_41315 AATTCCTGCTTGTGCTGAAGAGATGGAGGTTTTGTTTGCACTGACGCCTGGTCCTGGTGG Gene BVV0102_090611 - 0 NULL GK000013.2:79651315-80016801 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044165 TCONS_00044166 1 XLOC_026135 NonCoding TCONS_00044166 XLOC_026135 NonCoding NonCoding - 13:79974333-79977828 - TSS32519 2669 3 TCONS_00044166_2 96 0.0846759085799925 3 0.236977676016027 0.0008145712926777 0.000290108581538473 0.000303324744177023 0.000416369111249789 0.000190905906586911 2.99906991763589e-05 0.000173797060542241 0.00020525428108896 0.000130118214711631 4.4212275459684e-05 1.24747848669992e-05 1.75649583422429e-05 1.97579367918326e-06 7.36142953333665e-06 1.56731027770627e-142 0.000324496754125573 0 0 3.65060510409241e-36 2.23766571098888e-06 1.35857143668357e-31 0 0 5.50471264272263e-285 4.74135377986864e-05 3.18965134283367e-14 0.000526285216167698 3.59878975469543e-06 1.89405048143025e-06 2.29090531666056e-06 XM_002692357.2 NFATC2 PREDICTED: Bos taurus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 (NFATC2), transcript variant 0.0 994 100.00 0.206069689022106 XM_005260413.1 NFATC2 PREDICTED: Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 (NFATC2), transcript variant 4e-11 75.2 75.89 0.0412139378044211 0 noncoding 1 1 1 1 0.0321450962913272 0.785138259596079 0.0419730511019029 0.65444255707153 GAAGCAGCTAATGTAGATGGGTCTTTGGGGGTGAGGGAGGGGGCGGGTTTCAGTGGGTCCAGGCAAAGGTAACCATCGAACTCTGGAGCCAAATCCTGAGCTCGTGTCCCACTTTGAGTCTAGGCCGGACAGGGGATTCGGCCTTCTTCCTGGAGGAACCCACCCACTGAAACACTTGGACCCGCCAATGACCACACTTCACTTAACAAAGATACCTGCATGGCTATTTTTTAGGGGGGAGTGGATTGCTTCAGCCCTTCTGCCATTCCTTCTCAAAATTCAATGCACATGCTTGAGATTCTTCTTAACTACATTATGGAAAATCACTTGGGCTGTTGGAGAAAAGTAAGTGGGAAGAGCAGAGAGTTGTGAAGCTTGTCCGGCCGCAGTGGACGGTGCTCACCCTGCAGCTGGGGTGACGCCCACCAGTCCCGTGCAGCGGGGGAAGGCAGCTGGCCGAGAAGGCCCCCCTCCAGCCAGCTTTTTGAAAGCAGAGAAAGTTGGGGGGAAACAGACACATGTCATAACTTAAGGCCAAGAAGTTTTAACAGCGGGCGGTCTTGATCAGAATGTATCTGGGGTCAGCAGGCACTTAAGGCTTGGATGGGACACCGTCAAAGTCAACGGAGATGCTCTTTGGGATTCAGAGCAAGACCCGGGATGCAGAGAGAGAGGCGGCGAGCTCGGGAATGAAGGACATCCAGAAAACACCCACTCTGTGACCAAAACACAGCTTGACCCACAAAACCTACAGCTCTGAAGAGGGGCCTTTAAAAGGAGAGTGGGCGGAGCCCCCACCAGGACCAGGCGTCAGTGCAAACAAAACCTCCATCTCTTCAGCACAAGCAGGAATTCCACCCCTTCACCCCTCCTCCCGGGTCACACTATGAGCCTTCTCAAGTACCAGCATCCTCCAGGGACCCTGGAAAGTTCCATTACCCCCTGCCCCAGGAGACTGGGGAATCAGCAGGGAACCAAGAAGGCGATGGCACCCACTAGCGTCAAGGAACTAGCCCTCCTCTCCCCTTCTCCCCGCTTCTCTGAGGCACCGGCTCCTAGAATCAGGACAGGAAGGTCTGGAATAGTGGCGATTACGAAAGCCTGCCTTCAGCGTTCTTGGGGAAGAGTTGCCGTCACAGGCAGCCCAGACACCAGGCAGGGCTGTGCACCGCCTTAATCTGTGTGTGTGCACCTTGGTTACTGCAGCTGATGGTGTGGGCTGGCCCCAGGGGCAGACCCCCCGGATCCCATCAAAGGGAGGTGGATCTCCCCCCTCCCAGTCCAGCATTGAATTTCTTCCCACAGGCTCCTTCTGCTTCGTTTTCTTATCTCAAGTCTTATCCTGAAACTATAGAGATGGGAGATGAGCAGCGAGGGCTAAGTGTTCAGATGGGTCCAGAGTCCCTCCGTGGTCACACCGGCCCTCCTAGGTTCAGGGTGCTTTTCCCTGGAAAACCCCTGCCGGGAAGAGTGCACTGCCCAGAATAAGGAGAGAGCACATGCACTCTGCTCTGTTGCCGAATGAGCCGGGTCTAACCCTCAGCTCTCTCACTGAGCGGGCTGCGTGCCCTCACCTCCCCGAGCCTCGGTTTTCTCTACAGAGTGACACTCCTTATTGTGTGTGCATTTCAAAATGGTGAGGATGTTGGGTTCTGATGTGCACGAAGGAGCCTCGCAGGACGCCAGGTGCCCAGCACTGCGTGGCTGTAGCTGTCGGCTGTGACGGGTACTGATTGCCCCCATGCTTGGTGCTGGACAGGAAGCCCAGTGCTTTGCATCAGTGGGCTGTGCTTTGTGGCAGAAGCGAATCGGCACCCTCCCTGTTGTTCAGATGTGTGCTGAGAGCAGGTGCAGGGAGAGGTCGAGGGTTCAGGGTCCAGAGCCAGGTGGCTGGTGCTAGACGCCACCTCTGCCACTCCCTCACTGGGTGAGCCTCACCTTAGCGATGGAGCTGCTCTGTGCCTCAGTTTCCCCGTCTGCACATTGTATAGACATGCCCTTCTGTCTACAGTTGTTGAGACGCTTAAATGAAATAACACAAAATTATCCCAGTCCCCAGGGTACAGCAGATGTTGGTGTGCAGGGTAGTATGTGCAGATGTCCTAAGAGAAAGTGACACAGTGTATCAGAGTGACAACTGGTTCTCAAGTGCAGGAATGGACCCATTGATAGGAACTCATGTGTTCAGCTAACCAGCTCTAACTGGGCACTGACTATGTACCAGCTGCCAGCTGACTCCCAGGGGCCCCGAACCAGGAGCTGGCTGAAGAAGCCCCCCCAACCCCCCTCCCCGGCCTCTGGGAAGCGGGAGGGGCTGGGGGTCCTGGGCGGGGCCGCGGGGCAGGAGAGAACGCGCGGTGCCAGGGGCGGAGGTGGGGCCCGGTGCGGCTTCACGCGAAGCTTTTCAAAGCCCGGATTCTGAAGGGCTTCCTGTTTTCTCAACCTAGGAAGCCGAGAGGAGTCAATCCTCAATGGAAACTCTCCACAGCCTCAGTTTTCTAAAAATAACAGCTGGGCAGAACCGCAGGCAGAGCCGCGCTCACCAGAAGGGTCGTTTCCCTCCTCGGGGCTGGGGGGCGGCCAAGCCCCCCGCCCGGTGGACAGGGACCACCCCGGCCCTCAGCCCGCGGGCGGGCCCCTCGGCCCACGGCCGCTCCTCTGGGCAGAGG TCONS_00046518 TCONS_00046518 r 5' 0 TCONS_00046518 TCONS_00046518 r 5' 0 EMBV3_35818 GTGGCAGTGATCATGAGGCTGGGGAACCAAGTCAGGGGGAACCAACCAGTACCTTTTGTA Gene BVV0102_373617 + 0 NULL GK000028.2:778167-1126800 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18204 TCGTGATCCACCGGGAGCTGACGGCCAGAGACCTGATCGACTTCCTGGCAAGTGTCTACA Gene GeneID:606737|RTL1:XM_002696772:457_cdna Constitutive 0 NULL GeneID:606737 21 GENE RTL1 PEG11 retrotransposon-like 1 EMBV3_06111 TCGAAGCCTGAGTCCCCAAGCCCTCCCAGCGGAGAGGCCGGAGGACCTGGAGCTGCTTCC Variant GeneID:282308|PIK3R2:NM_174576:11_cdna 411^547 1 EMBV3_19633 GeneID:282308 7 GENE PIK3R2 MGC138113 phosphoinositide-3-kinase, regulatory subunit 2 (beta) EMBV3_28676 CCCCAGGAAGAGTCTGCGGGGCAATACGATCATTGCTCACCTCAATTTATAGGGGACGAA Gene BVV0102_022746 + 0 NULL GK000028.2:34496326-35032454 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32650 GCTTTGTCTGTGGAGACTGATTACACCTTCCCAAGGTTGAAGCAAAGGAGGAGTCGGAGG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 838^949 11 EMBV3_29784 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_17336 GTGACCAGCATGACACCTTCTTCCTGCGAGGTACAAATACACCTGGAAATTGGACGAGGC Variant GeneID:522024|FARSA:NM_001101107:41_cdna 888^972 1 EMBV3_13307 GeneID:522024 7 GENE FARSA NULL phenylalanyl-tRNA synthetase, alpha subunit EMBV3_28711 TCATCAACACCTACATCTCCGTGCCCAAAGAGAACAGCACGCTCAACTGTGCCAGCTTCA Gene GeneID:504874|TRAPPC5:NM_001077849:297_cdna Constitutive 0 NULL GeneID:504874 7 GENE TRAPPC5 NULL trafficking protein particle complex 5 EMBV3_26584 AAAACGTTGTGCCACAAACTACCTCTGAACGCTACACATTCCGACTGCAGGACGGCTCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13767 CATGGTGGTCCTGGGCCTTGGTTCTCTTGCCCTATTGGTGGGTTCTTACACCCGTATTAT Gene GeneID:614370|LOC614370:XM_002687328:153_cdna Constitutive 0 NULL GeneID:614370 5 GENE LOC614370 NULL similar to hCG2044647 EMBV3_14395 TTAGGAGGATGGGAAACAGTTGTGCTTTTCAAGGAAGAATCTGTTTTGAATCTCAGACTG Gene BVT0102_262882 + 1 EMBV3_13060 GK000004.2:22145008-22333432 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183356 TCONS_00183359 TCONS_00183358 TCONS_00183360 TCONS_00183354 TCONS_00183355 TCONS_00183357 1 XLOC_111137 Coding TCONS_00183355 XLOC_111137 Coding Coding DGKB 4:22330396-22811618 j TSS136847 4968 1 TCONS_00183355_4 203 0.0666264090177134 7 0.989690807342157 0.000911186292212455 0.000585871668007425 0.000921580118319211 0.000207767337740492 9.14323026781783e-06 3.17019621582581e-05 0.000222321302257128 0.000969921929068511 0.000106450520124939 4.40389761475866e-05 2.35977307264258e-27 1.12230807310629e-30 1.01709490352112e-25 0.000657645819487353 1.69609336954226e-07 2.86297635077896e-14 0 1.14409026012583e-18 2.04353965007418e-07 0.000739807490930025 0.000370257369190991 0 0 2.50651642061229e-09 0.00096108392817519 0.000695820021210116 0.000863075522704879 1.31839149485947e-05 3.4589179206801e-46 1.2458778500339e-05 XM_005205199.1 DGKB PREDICTED: Bos taurus diacylglycerol kinase, beta 90kDa (DGKB), 0.0 7488 100.00 0.835547504025765 XM_005249628.1 DGKB PREDICTED: Homo sapiens diacylglycerol kinase, beta 90kDa (DGKB), 0.0 3759 80.74 0.800322061191626 TCONS_00183355_4 sp|Q9Y6T7|DGKB_HUMAN DGKB_HUMAN Diacylglycerol kinase beta; 5e-139 412 98.03 0.995073891625616 1 coding 1 1 1 1 -0.0631020423147505 0.743158002758705 0.00335586210841066 0.949861492233125 CTGAAGTTAGCCTGCCATCTGGAGATGCTCACCTGCTCTCTGCTTGCTGTCCCACGTGGGACGCACGTACGGCATGCAGCACGCACAGGGCACGTGCACGGAGTGCCAGCCAGGAGGTGGGGAGGAAGGAGGCCCACAAACCTGTGCGGGCACCAGGTGGGTCAGTTGCCTGCTAAAATCATCAGTGTAGGCTTCCAGAAGCAGCTCAGGGGCCATGCTCCTGGAGGAATCTCTGCGTTGATCTGTAGGCTCCATCGCCCCTCAGATCAGATCAGATCAGATCAGTCGCTCAAAATGCCCCAGTGACTGTGAGGCCTTCTCTCTCCTACCTGCTCCCAGCCTCTGCCACCCACTCCCCACCAAACTGGTGTTGAGACCCTCTGTGCTCCAAGTGAGATGAGAAAGAAGTGGCCTCTGCGGCAGCATCCTGCGAGGCACAGGAAGCTAAACACTCCATCCCGATGCTGAGGGAAATCTGGGACTGAATGGAGCCTTTTCTGCAACTGAGCTGGGCCACGCTGGGGGAGTGGCCATGCCAGTAAAGGAAAAGTGTTCTAACCCCCTTCAGTGGATCTGTTCTTGGATATTTTGCTGTGCTGGAACTTCTCCGCTGGACTCCCTGACTCGGCGAAGGATGCTTCCATTGCACACAGATTCCATATCATGAGAGAGAAACACCCAGAAAAATTCAATAGTAGAATGAAGAACAAATTTTGGTATTTTGAGTTTGGCACATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTACATGAATCTGTAGAAATAGAATGTGATGGAGTACAGATTGACTTAATAAACATCTCTCTGGAAGGAATTGCTATTTTGAATATACCCAGCATGCATGGAGGGTCCAATCTTTGGGGAGAGTCTAAGAAAAGACGAAGCCATCGCCGAATAGAGAAAAAAGGGTCTGACAAAAGGACCACGCTCATAGATGCCAAAGAGTTGAAGTTTGCAAGTCAAGATCTGAGTGATCAGCTGCTGGAGGTGGTTGGCTTGGAAGGAGCCATGGAGATGGGGCAAATATACACAGGACTGAAAAGTGCTGGGCGGCGGCTGGCTCAGTGCTCCTCTGTTGTCATCAGGACCAGCAAGTCTCTGCCAATGCAGATTGATGGGGAACCATGGATGCAGACCCCATGCACTATAAAAATTATACACAAGAACCAAGCCCCAATGCTGATGGGTCCTCCTCCCAAAACCGGGTTGTTCTGCTCCCTCGTCAAAAGAACCAGAAACCGAAGCAAGGAATAATCCCGTATCATTCCACTGTTGGCACTGTTATTAGCATAATTGGGCCATAGAACACTTATGCTGGAAACCTTTGAACAAGTTCAAGTCTCCTGCTCATGTAACATCATGGAATCGGTTTGACAGTTTTTGTGACTGAGTTAATGTAAAATTCAGCTAATAGGAAATTTATTGTCTCAGTTTTCATGGGCATCTTTGCATGAAGAAAGCGGAAGTTTACATGAAGTGATATTGCATATTTTTGTTGCATGCATTCCCATAGATTTTTATGTCTCCTATCCATTCCTTCACCAATTTCCACGTACTAACCTGTAAGAAAAGTCTGTACAATAACAACAAAAAAAGGAAATGTCACAGAAAATGTGATTCCAGTTATTAATAAGCACTACTTAATAATGCTTCAGTGATCATAATTGCAGATTGCTATACTTTTCCCTTTAAGAATCAAACAGCATATCAATGATCTTTGACCTATGACTTGAGGAGCAACTTTTAATTGAAAGGTTTATTAAATAGTTGTCTATTTGCTGTATCTAAATAGTTTTCCTTTGACTTCTTGATGCTTCTGAGTGGAATTTATTAATATGCTTCTGAGTGGAATTTATTAATAAAATATCAGGTGTAAAATTTTCTTGTGCTGAGAAGTAGGAAGTGGTTTTATTTTGTTTAGTTTTGTTTTTAATTCTACACATAAGTGAAATCATGGTACTTGGCAGTAAAGTGTGTTAATATGGCAAGCTTTATTCCCTTCTGCATGTGAATCTAGAAGAAAATTCTTAATCACAACAGTAACCAAATAGATGTTTGAAACTATGTGCCTAAGTGTATTTCCCACCAAAGATTCAGAAAAAGATGCTTGAGAGAAATGGGTTATGCATAATTAATTAAGCATCATGAAGAAAATTTATGGTTCTAATGATTAATTTTGTGATGGCTAAAACTCTGGAAGAGAAGGGATTACCCATTAATTATAATTAAAAATCTCCTTTCACAGACAATAAGCTATGCAACACAATCAAAGCTCAATAGCTAATTTCTTGCTTTTTTGGTCATTTGTGAGTATAGGTGTCTATAATTTTGAATGGGTCAGCTAAGTACACTTGCGAAAGTAAATGATTGTATCATTTCCTTTCGAGTATAAATTGATCCCTGTAATAATATTGAGCTCTTTGAAGTCAATCATGCATGCAGTTGGCACCCTCCCTTTTCAACTCCTGCACTCCCATCTCCATGACTTTTCAAATATTTATTTGGAAATAATGCCCTAGATTGTTATTAAAGTTTTTCATGGCATGGCTGAATTCTCTGATTGTTTGAAGAAATTATGGAATAGTATTTTTAAGTGTTTCATTTAAACCTATGATATAAAATTAAATGCTTGTTCTGAGCAGTTTTGGTATTGTTCATTCATATTGAGCTGCATCTCCTCGTTGCATGTTTTATGTTTTTAAACATGCCATAAGGAAAACAAGTGCTTGAAATGCATGATTTATTAGTTTCTCTCTCCATTCTGCATTAAAGTACTAATGATTTTCAGTTCTGTTTTTCTATTGATTCATTCATCTTTGAATTACAGATAGCATTTAGTGATTCTTGAACATAATCCTGTACATGGACTTATGGATTTCAAATTAAATTGCTATAATTTTTGTTCTTTGATTGGAAGACTCAACTGAATGTTGTTATAGCAAATAACTACTCTCCAGCAATGTGCTATCCTGGAAGATTATGTCTAAAGCATTTTCTTTTAGTGTTTCAGGAACATTGGATGGTAAATATAAATCAACAAAAGTTTAATTGCTTTAAAAATAAAAGCTTTTGAATAAATTAAGACATTATTTAGCATTCTCAGGAAAATTATCATTATAGTTGCAAATGTAGCACAGCAATCACTTGCCCTAGTATAATAAAAGTTATTTGGCAGAGCAGCCATCTAGACCAGAAGAAATCTCAAAGCAGTAACAAATGCATTACTGACATAATGTTACATAACACACACATTGATTTTTGTGTATCTATGGTTACAGGTAATAAATATTTTCACACAGACTGACAACATTTTCTGTAATGGGCCGGCAGGCTTTGTGTCAGAAACATACTCTGAAGGCACAAATTATTTTGTGTTCAGGACAGCATACAATTATTCCCTGGCTACCTTTCATAGTTTGAAGGCAGCACCAGTTTGTGAATCAGTTTTAACAATCTGTGCACTGAAGAGCTGTTGAATAGACAGTGAGATGAGAGAAATCAAGCAACCTGCTTAAGACCACAATAGTTGAAATACTGGGCTGTAGCTTTCCTTCAATGTAGCTATGTAGTTATAATTAGTAACAATTGTAGTTACATCTTCAGTCAGTGGGATTCATTGGTACCAATCATAAATGTTCAAACAGGAATCGAACTTTCCTCTCCCCAGCTCACTTTGCGAAGATACTGATGAGCTTGCCCTTCAAGAACACTACTCTAGGGGTTTGGAAAGTGATTTTTAAAAACTACTTTGATAGTTTTGAAATCAGAGAAGATATTCTCACCATTTTCTGACAGCTTCAAGTGAAGAATATGTATTTTAAGAAACATTCCAAACTGAAAGCTCTGTGGTATATAGAAATATTAAATACAGTTAGCTTTGTAAGGTGGAAACTTTTCTTATATGTGTGTGGGTCAACGTTTGCATTGTTGAGTCAACCTTTTCTAAATACGGTAGATATAGTTGTATAAGGTTTTAAATGGATGAAGCTCTTGAGTAAATATCATACTGGGATTTCTGGGTTCAGAGGAAAATGGGAAAAGAGATATGTACTTTGCTGAGTATTGCCATACACTGAGTAGATAAATAGAAATTCCAAAATAAAGCTGGATATCTATGCTGCTAACAGGAAAGAAGGTGTCTGTGTAGAATGGAGAATTTTAAAGGACATAAATGTATTCCTCTACTTATGTGTGTATACCATGTATATCTGATGCTGTTAAATTTATTGTGGAAGGAAAATATATCTGGGAGGAAGTAAAGAAAATAGAATTTTAAAAGAGTTTTTATTTTTAAACAGATTGTGTGATTATAGCCAGAATAAAGCAAAAGACTCAGATATTTAGTGTATTCTACTGCAGGGGGAAATTTAACTCCAGTGAGAATTATTGAATGAGATATATATGTTTTTTTTTCGCATTTTGTTCTTTTTTCCTTATTTAGGAGGATGGGAAACAGTTGTGCTTTTCAAGGAAGAATCTGTTTTGAATCTCAGACTGTATTCTACTTGAATAAGACAAAACTTTCAAACAGCCCCATTCCTTTATGTGTCAGAAGTTTGTTTCTCATTGGTTATAAAAAGGAAAATGTTCCTCTCTTGGCACATATTAGCCCAAAGACCTATTCAAATAGAGTACATATATTCTAAATGAAAATATTAAGCCCTTGTAATATATGTTGAGGATGTAAAATTTAAATAAATAAATAAACAAGCAAAAATTTGCCAAGGAGCTTTTATTTGGGGAAATGCAGAAATCACCCCCTAAGTCTCTCAATGAAAGTGCATTCTATTTAAATAAAGTTTGAATAAAATCACATTTAAAGGATTCTCTATATCCTCATTGTGTTTAAAAACATGGAATTCATTCATTTCATTATGCTATCTTATTTTCTCAGAAAGTGTTATTATATATAGTATTCTGCTTTTTGAAATAAAAATGTTAACACTC EMBV3_07474 TCCTCATCAAAAGGAAAACATCACTACCCTCATCAGTGTCCCTGCAAAACACAGACCCAG Gene GeneID:281052|CD36:NM_174010:2_cdna UTR3_Alt 2 NULL GeneID:281052 4 GENE CD36 NULL CD36 molecule (thrombospondin receptor) EMBV3_11934 GATTTAACCGTAAGAAGAAGGGGATGTATCGGAAAGCTATCACAGAGGCCGCCAATGCCG Gene GeneID:524314|PWWP2B:NM_001075856:5_cdna Constitutive 0 NULL GeneID:524314 26 GENE PWWP2B MGC140452 PWWP domain containing 2B EMBV3_35528 ACAGGCTTTGAAGGGCAGTAAAGAGCTTGAAAATCTCATTGGTATCCCCCATGCATCATG Gene GeneID:614469|ITGB3BP:NM_001079619:75_cdna Constitutive 3 NULL GeneID:614469 3 GENE ITGB3BP NULL integrin beta 3 binding protein (beta3-endonexin) EMBV3_30241 GGAGGAAATAGCAATCCACACCAGTACTCTTATCTGCAAAATCCCATGGAAAGAAGAGCC Gene BVT0102_222902 - 1 EMBV3_08763 GK000007.2:35635012-35662598 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220215 1 XLOC_133532 NonCoding TCONS_00220215 XLOC_133532 NonCoding NonCoding - 7:35658702-35659041 - TSS164213 339 1 TCONS_00220215_1 35 0.991150442477876 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0111411901221659 0 0 0 0 0 0 0 0 0 1.48450645788835e-06 0 0 0 0 XM_608560.5 DGKI PREDICTED: Bos taurus diacylglycerol kinase, iota (DGKI), mRNA. 7e-48 194 81.68 0.578171091445428 0 noncoding AGGGGAGGGAGAGAGAAATTAGGAGTATGGGATTAACAGACACACACTAATATATACAGAATAGACAAACAACAAGGATTTACCATATAGCATAGGGATGGGGTTCCCAAGTGGTTCAGTGGTAAAGAATCCACCTGCCAATGCAGGAGATGCAGGTTTGATCCCTGGATAAGGAAGATCTCCTGGAGGAGGAAATAGCAATCCACACCAGTATTCTTATCTGCAAAATCCCATGGAAAGAAGAGCCTGGTGGGCTTGGTCCATGGGGTCAGAGTCAGACACAACTGAGCAACTGAGCACACACACAGGGAACTATAATCAATATCTTGTAAAAATCTA TCONS_00216433 TCONS_00216434 . 3' 3517 TCONS_00216433 TCONS_00216434 . 3' 3855 EMBV3_21619 ATCATCAAGGTGAAGTCCTCCGGCATCCGAGTGGGTTCCTCCAAAAGGAAAAAGTCTGAG Gene GeneID:282083|SSTR2:NM_174467:323_cdna Constitutive 0 NULL GeneID:282083 19 GENE SSTR2 NULL somatostatin receptor 2 EMBV3_18144 AAGGAAGGAGCTGCTGGATTCTTCAAAGGGATTGGAAAAGGGCTTGTGGGTGCTGTGGCT Gene GeneID:783566|VPS13C:XM_002690846:183_cdna Constitutive 0 NULL GeneID:783566 10 GENE VPS13C NULL vacuolar protein sorting 13 homolog C (S. cerevisiae) EMBV3_11029 GCTAGCAGTAGGATGCCTATATATGTGGTTGCTTTCCTCCTGTCTTCTCAGGCCAGAATT Gene GeneID:616956|LOC616956:XM_002686581:43_cdna Constitutive 0 NULL GeneID:616956 3 GENE LOC616956 NULL similar to Ras-related protein Rab-17 EMBV3_05502 GATGGACCAACACAAAATAAACTACGGCAAGCCAGGGTAGAAACCATAAGCACTGAGGTG Gene GeneID:785556|TMPRSS11F:XM_002688298:75_cdna Constitutive 0 NULL GeneID:785556 6 GENE TMPRSS11F NULL transmembrane protease, serine 11F EMBV3_07634 CCAACATGCTAGGGGTCCAGCCTTTCACAAGTATGCCATGCAGTTACACGAAGACTGCTA Gene GeneID:522040|MGC143117:NM_001080286:30_cdna UTR3_Alt 2 NULL GeneID:522040 19 GENE MGC143117 NULL hypothetical LOC522040 EMBV3_26650 TACCCTCATCCATTTAGGACTCTAGCAGCATAGCTGAGACTTGGGGGGTGAAAGACCTCT Gene GeneID:509313|SMYD5:NM_001080248:4_cdna Constitutive 2 NULL GeneID:509313 11 GENE SMYD5 NULL SMYD family member 5 EMBV3_12844 CTCAACAGTTCCCTTCCTGTAACCTCTACCCATTCCAGTCTATCCAGTACACTCCAAAGC Gene BVT0102_253728 + 0 NULL GK000028.2:8123254-8143950 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158949 1 XLOC_097321 Coding TCONS_00158949 XLOC_097321 Coding Coding GGPS1 28:8111345-8126609 j TSS119227 3245 1 TCONS_00158949_2 300 0.023728813559322 5 0.787721941951124 0.000141797645272631 0.000185173033510562 2.71850477756386e-05 2.54640548375493e-05 0.000366876013984817 3.49981972452e-33 0.00012075832992315 3.42095017012607e-06 3.46257955607033e-05 4.53263085832074e-05 3.66846316551343e-19 0.000137620309690171 1.09000112066729e-36 8.95292092259536e-05 0.000103722364858454 3.14401425038534e-05 6.15786329724337e-17 7.42282799118899e-54 7.19866588532819e-05 5.40722421614996e-05 2.01831023801855e-05 5.78746112009762e-21 3.9372471908494e-05 5.0339118836991e-05 0.000246024336394918 0.000231764314385119 0.000334761292682166 0.000121645058324925 4.01719124829352e-05 3.47620067387845e-06 NM_001079801.1 GGPS1 Bos taurus geranylgeranyl diphosphate synthase 1 (GGPS1), mRNA. 0.0 2497 99.86 0.427734976887519 NM_001037277.1 GGPS1 Homo sapiens geranylgeranyl diphosphate synthase 1 (GGPS1), 0.0 1581 87.31 0.392912172573189 TCONS_00158949_2 sp|P56966|GGPPS_BOVIN GGPPS_BOVIN Geranylgeranyl pyrophosphate synthase; 0.0 622 100.00 0.996666666666667 1 coding 0 0 0 0 -0.210487072595297 0.318667818132937 0.029502592476945 0.608864761492078 ATTGCACCGAGTAATGCGGGGTCGTCGGCGGCCGAGGAGGGCGGCGAGTTCTGTGGTGAAATAGGGGGAGGTATTCATGTAGGCATCGGAGGGACTCTTACTCTGAACTATAAGCTGGGAAGCTGATACTGGGTACAGCTTACTCCCGGACCCGCGGCGTGAAAGTTGTGATATCATCCTCGAACCATCAGCTTTGAAATTTAAAAACAATGGAGAAGACTCAAGAAACCGTCCAAAGAATTCTTCTAGAACCTTACAAGTACTTACTTCAGTTACCAGGTAAACAAGTGAGAACCAAACTTTCACAGGCGTTTAATCATTGGCTAAAAGTTCCAGAAGACAAGTTACAGATTATCATTGAAGTGACAGAAATGTTGCATAATGCCAGTTTACTCATCGATGATATTGAAGACAACTCAAAACTCCGACGTGGCTTTCCAGTGGCACACAGTATCTATGGAATTCCATCTGTCATCAATTCTGCTAATTATGTATATTTTCTTGGCCTAGAGAAAGTCTTAACCCTCAATCACCCGGATGCAGTAAAGCTCTTTACCCGCCAGCTTTTAGAACTCCATCAGGGACAAGGCCTAGATATCTACTGGAGGGATAATTACACTTGTCCCACCGAAGAAGAATATAAAGCAATGGTGCTGCAAAAGACAGGTGGACTATTTGGATTAGCAGTAGGTCTCATGCAGTTGTTCTCTGATTACAAAGAAGATTTAAAACCACTACTTGATACACTTGGGCTCTTTTTCCAAATTAGGGATGATTACGCTAATCTACACTCCAAAGAATACAGTGAAAACAAAAGCTTTTGTGAAGATCTAACAGAGGGAAAGTTCTCATTCCCTACTATTCATGCTATCTGGTCAAGGCCAGAAAGCACCCAGGTGCAGAATATCTTACGCCAGAGAACCGAAAACATAGATATTAAAAAATACTGTGTACATTACCTTGAGAATGTAGGTTCCTTTGAATATACTCGGAATACTCTTAAAGAGCTTGAATCTAAAGCCTATAAACAAATTGATGCTCGTGGTGGAAACCCTGAGCTAGTAGCTCTAATAAAACACTTAAGTAAAATGTTCAAAGAAGAGAATGAATAATGTTAAGCCATTCTCGACTAGGCCTGATACTTGGTTGACTTTTTTTTGTCTTTTGGCCTATTACCTTAAAAATTGGACCAAGCTGTTAGTCTCCAAAAATTGAGTGATAATGATGATGTGAGTTGTTTCCATTTAGAATCCCTGTGTACAGATAATCATCATAGTACAAAGTTGTAGGAATCAAAAGGAGCCACATTTAAATAAGTCTAATTTGAATGTCAGAATGTGCTATGTTGGGACCTTGTGGCCAACTCTGCCTCACATGTTCTGTGGATTCTGTCAATAAAGAAGACTTCAGCTTCCAGGAACTTTTATCCACATACTTCCTAACTGTACTACATGGGCAGTTCACAATTCATCTACCCCATTTCTGAGCCATCAACTTGGGACCAGTTTCTATAGCTCACTGGCCCAAAGATCACAGGAACTCTTCTTTCTTCCTAAATGTTGTTGCTTAGAATAATTCATTCTCCTCCCTGGAAATTCCCTTACTTCCATGAAGAAGCTGACCATGAAAGTCCCGCCTGTCCTGCCAGTTCCCAGGAGGAATCCGAGGTTCCATGATTTGCCCTTCCCATGTTGCCTAGTACTACTAGGGGGATGTTTTCAAAACTGTTGCCGCCATTGCAAGTTAACGTACTAAAGCCTCAAGAGCCCTTTTATTTTCCATCTAATCCTGATGAAGATTTAAAATCCCAATCTAGCACCCCAGCTTCTGCATTCTTCTCCCATTTAAATGTAGACTCTTCTTGCCTTTCTTCCGCTGTACTACTTTAGGTCTGTCTTCAAATAGTCTGCCTTCATCTCAAGAAAAGTTTGTCCTCCTGCCCTCAGCCAAACAAACTCTCCTGTTCTTCATCCCCTCCTTTTCTGTCTCTTGAGAGCCTTTTTCATTCCCTGCCTTATATCCTCAAGATTTATCCATTGGCTCTTTTTTGAACATTATACCAAGAGGAAAGAAAGAGGGAAGAAAATGTCCATTTGTGAAGTTTCTACTGGGTACCCCCTGTTTTATGTTTTTCTCTTTGAGCATCTACTGAACAGAGCCAGGGCCCTGAATACAGATCAAAGCACTTTGCTCTTCTGTTGGCGTCCCATTCTGTATGCACACGTAAATATGTTTAAGTTTAAAAAGCACTGATCCATTGTATTAAAGTACTCAACAGTTCCCTTCCTGTAACCTCTACCCATTCCAGTCTATCCAGTACACTCCAAAGCTGTCTTTCCAAAACACAAATCTGATTGTATCATTCCCATGTATTAAATTCTCAGAATCCCCAATACTGCCATCTATAAATTCCTTGGCATGTAAGGCTTTCCAAAATCTGATCTCTCCAACCAACTTTACCCATATTTTCTAATATTTTACTCTCCCCATACACCTTATTCTCTGCCAGAAAATAATGTTCATCATTGTTGAGATACTCCTGGTTTTCATGCAGTTCATTTAGAATATTTCTTGAGTGCCTACGACTTAGATCTTTTGTTGGGCTTTGGAGATAGAAGAGTGACAGAACTATCACTTAGCCTCATGTGATTTTCCTGTAATGGAGACTGGAAAGTAAATAGCCAGTTACTAACCAGTATTGTTAATGCTGGGATCAGAGCCCCTAATTACTTTACATGTCTGCTTCTCCCATTGGATTAGAAACTCATTAAGGGCAAGGACTGTGACTTACTCACCCTCCTATTCTCAGTAGAACTTAATAAATATTTATGAATGAATAAATCGACTTGAAACTAATCTCCCACCTCTCAAGGGTTCCATTAAATATAATGTATGTGAAAAGATACCATAAACTTCAAATATTACCTTTTATGTTAATGTGGTTCTTCTACCTCTAATTCTTCCTCTAATGATTCTTACTGAATGTTTTTCCTTCTGAAACCATTTCTAGACTGTTTACTTTCAGTTTTGTCCATAATTACCATTGTGTCAGAACCCTGACCTTATATTCAAGTCCTATATTTTTAAACTACCTGTTCATCTGAGTTTTCCATTAGCTTGAAATCAGCATATTTAAAATCTGCTTAGACCTCCCCTCTTATCCCTTTGCCAACCAAAATGATTGAATGAAACTGCTTCTATCTCTTGTCTCTTCTGTCACCATTGGCATTTGTTTTTTAATACCC EMBV3_30589 CATAGCCAATTACTCTTTGATGAGGAACCCAAGAATAATCAATGGGAAAAGAATAGTCTC Gene BVV0102_001954 + 0 NULL GK000004.2:50066474-50267411 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16489 CCTGTTTGCTGTGTCCATTTTTCAGATAGTAGAAGGGGCGAGTGGTAGGGATGTGAGGTC Gene GeneID:508535|FKBP4:NM_001034322:10_cdna Constitutive 0 NULL GeneID:508535 5 GENE FKBP4 MGC127596 FK506 binding protein 4, 59kDa EMBV3_28287 TTCTCCTGGGTCCCTCTGGGGTTATGGGAGGCCCGGATTCAACCAAATGCAGGAGAGGTG Variant GeneID:507315|NUDT17:NM_001083383:65_cdna 518^616 1 EMBV3_09971 GeneID:507315 3 GENE NUDT17 MGC140296 nudix (nucleoside diphosphate linked moiety X)-type motif 17 EMBV3_29399 GCCCGATAAGCATCACATGAGCTGCGGAAATCCTTTTATACATTCTGTACATACGTAGCC Variant GeneID:100141235|LOC100141235:XM_002691066:502_cdna 675^717 3 EMBV3_13869 GeneID:100141235 10 GENE LOC100141235 NULL similar to Chromosome 14 open reading frame 50 EMBV3_37470 GGTTTGTTGCCTACTTAGCTGAATATATAATGTCAGCTTATCCTAAGGCTGTCCACGTAC Gene BVT0102_139703 + 0 NULL GK000010.2:58352680-58439443 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017390 TCONS_00017385 TCONS_00017389 TCONS_00017386 TCONS_00017388 TCONS_00017387 1 XLOC_009018 Coding TCONS_00017389 XLOC_009018 Coding Coding MAPK6 10:58436575-58470749 j TSS11890 4053 1 TCONS_00017389_5 312 5 0.881543908933954 0.0103123203372113 0.00794382293808121 0.00644852529012639 0.00566556079727372 0.00556059695001803 0.00364329019272096 0.00612395800990264 0.00580557213275156 0.0103720966250419 0.0050542127705925 0.00104057440208475 0.000352808409965093 8.32687085411586e-05 0.00275643866871149 0.00189718007030366 0.000410257484491705 0.00792047252413397 0.0178077837908317 0.00493934779091089 0.00794302314047472 0.00321144110177503 0.00984083057837119 3.00498155922941e-07 0.00495898306191556 0.00895518434524856 0.00716545835805269 0.00631170095141772 0.00215240299834095 0.000668668401319372 0.00364744624818734 XM_002706554.3 MAPK6 PREDICTED: Bos taurus mitogen-activated protein kinase 6 (MAPK6), 0.0 4260 99.96 0.583024919812485 NM_002748.3 MAPK6 Homo sapiens mitogen-activated protein kinase 6 (MAPK6), mRNA. 0.0 3622 93.85 0.583518381445843 TCONS_00017389_5 sp|Q16659|MK06_HUMAN MK06_HUMAN Mitogen-activated protein kinase 6; 0.0 596 99.31 0.923076923076923 2 coding 1 1 1 0 -0.122204706903146 0.411111435351169 -0.247217317120157 0.015620394403379 CCCCTCTTCCTCGCCCTCTCTCGCGGGTCGGGGTTACATGGCGGCGACTGCGGCAAAGCGAGAGCCTCGGAGACGCCGCTGCCGCCAGCACAGCCGGAGACCTGAGCCGACACTGGGGGCTGTCCGTGGGCCCCGCACTCCCTCGATGAGTCGGAGAAGTCCGGTTGTATCAGAGTAAGATGGACGGTAGCTTTGATTGTGATTGTGGTGAGCTGGAGCCACCTGATCACTAACAAAAGACATCTTCTGTTAACCAACAGCCGCCAGGGCTTCCTGTTGAAATATACAGCAACAGAGGAAGAAAAGAAGCAAAACGGAAATAGCGCTTACCAGCACCTTAGAATGATGCTGCTCAGGACCAGTCCAACACTGAATGTATCTGCACTGTGAGGAGAATGTTCATAGAAGCCTGTTGTGTGCATATTTATTCACATTTTTGTTAAATGTTAAATCCTTCAGCACAGTAAATCTGAGTGCATAGTATGTCATTTCATTCCGTTTGAGTTTCTTGAGTGTTTTCTTTAAATGTCTGCAGAGTTGCTGTCCCTTTCTTGAACTATGAGTACTGCAATCTTTTTAATTCTCAGTATGAGTAGAGCTTTTTGAGCTTTAAATCTAAGGGGAACTCAACAGGCCTGGTTGGCATATGCAATGAGCATCAAGAAACCATCTTGCTGTGGACGCAGAATTATTTTTTTCTCCCTTTTTAAAAGATCTTTCCTTTCGATGCCAGTTTTCTTCCTTGTTCACACAAGTTCAACAATTTGAAAGGAAAAGCCAATAGTAAGGGTTTAAAAATGGCAGAGAAATTTGAAAGTCTCATGAACATTCATGGTTTTGATCTGGGCTCTAGGTATATGGACTTAAAACCATTGGGTTGTGGAGGCAATGGCTTGGTTTTTTCTGCTGTAGACAATGACTGTGACAAAAGAGTAGCCATCAAGAAAATTGTCCTTACTGATCCCCAGAGTGTCAAACATGCTCTACGCGAAATCAAAATTATTAGAAGACTTGACCACGATAACATTGTGAAGGTGTTTGAAATTCTTGGTCCTAGTGGAAGCCAGTTAACGGATGACGTGGGCTCTCTTACCGAACTGAGCAGTGTTTACATTGTTCAGGAATACATGGAGACAGACTTGGCTAATGTGCTGGAGCAGGGCCCTTTACTGGAAGAGCACGCCAGGCTTTTCATGTATCAGCTGCTGCGTGGGCTCAAATACATTCACTCAGCAAACGTGCTGCACAGAGATCTCAAACCAGCTAATCTTTTCATTAATACTGAAGACTTGGTGCTGAAGATAGGTGACTTTGGTCTTGCACGGATCATGGATCCCCATTATTCCCATAAGGGTCATCTTTCTGAAGGATTGGTTACTAAATGGTACAGATCTCCACGTCTTTTACTTTCTCCTAATAATTATACTAAAGCCATTGACATGTGGGCTGCAGGCTGCATCTTTGCTGAAATGCTGACTGGTAAAACCCTCTTTGCAGGTGCACATGAACTTGAACAGATGCAGCTGATTTTAGAATCTATTCCTGTTGTCCATGAGGAAGATCGTCAGGAGCTTCTCAGCGTAATTCCAGTTTACATTAGAAATGACATGACTGAGCCACACAAACCTTTAACTCAGCTGCTTCCAGGAATTAGTCGAGAAGGTACCATGATTGTCAATTTTCAGAGCATGATTGGCCTATACATAACAACTTTGATATTGAGGAAGTTCAACTAGACCCAAGAGCTCTGTCTGATGTCACTGATGAAGAAGATGTACAAGTTGATCCTCGAAAATATTTGGATGGAGATCGTGAAAAGTATTTGGAGGATCCTGCTTTTGACACCAGTTACTCTACTGAGCCTTGTTGGCAGTACCCAGATCATCATGAAAACAAATACTGTGATCTGGAGTGTAGCCATACTTGTAACTACAAAACGAGGTCATCATCATATTTAGATAACTTAGTTTGGAGAGAGAGTGAAGTTAATCATTATTATGAACCCAAGCTTATTATAGATCTTTCTAATTGGAAAGAACAAAGCAAAGAAAAATCTGATAAGAAGGGCAAGTCAAAATGTGAAAGGAATGGATTGGTTAAAGCCCAGATAGCTTTAGAGGAAGCATCACAGCAACTGGCTGAAAAAGAAAGGGAAAAGAATCAGGGATTTGACTTTGATTCCTTTATTGCAGGAACTATTCAACTTAGTTCACAACATGAGGCTGCTGATGTTGTTGACAAATTAAATGACTTGAATAGCTCAGTGTCCCAATTAGAATTGAAAAGTTTGATATCAAAGTCAGTAAGCCGAGAAAAACAGGAAAAAGGAATGGCAAATTTGGCTCAATTAGAAGCATTGTATCAATCTTCTTGGGATAGCCAGTTTGTGGGTGGTGGGGAGGACTGTTTTCTCATAAATCAGTTTTGTTGTGAGGTAAGGAAAGATGAGCAAATTGAAAAGGAAAACACTTATACCAGTTACCTGGACAAGTTTTTTAGCAGGAAAGAAGATACTGAAATGCTAGAAACTGAGCCGGTAGAGGATGGGAAGCTTGGGGAGAGAGGAAATGAGGAAGGATTTCTGAACAGCAGTGGGGAGTTCCTCTTCAACAAGCAGCTTGAATCCATAGGCATCCCACAGTTTCACAGTCCAGTTGGGTCACCACTTAAGTCAATACAGGCCACATTAACACCTTCTGCTATGAAATCTTCCCCTCAGATTCCTCATAAGACATACAGCAGCATTCTGAAACATCTGAACTAAAACACTCAGCAGACATTTCCCTTTGTATTCTTCATGAAATGTGTTTTGTCTTTTTTATTACTAGTGTTTAAGTCTTTTTTTTTTTTTTTACTTGAATCAGATGGTGTCATTTAGAAAGGATTTTTTTCTTGGTTTTTAAAATCCAGACTTTTTTTCTACATGTGAGATGGTTTTCATTTTAACTGGCATGTCGTTTGCACACAAAAATAAAGAATAGAGCAAAATAATGCAATGCAGGAGGAGACAAAAGAAATGCACTAAGACAAGTAAAAAACATTCTCTTATAGAACAATGATCTGTTTTACAGGAAACAAAAATCTTGCCTTGAAATTTACACAGTGAGACTGTACATAATTGCATGAAAATATCTATTTTTTTCCTAAAACATTTTTCATTCATGAGTATTTTCAAGTTTTTCATACTGTACACATTTCTTAAAAACACATGATACCAGCAGCAACTGAAAATGAATGCCGAATNTGGTACACATGTGTTATCTACCTCAAGGTAACAAGAGTATGTGGCAAAACATATACCACCCATAGTGCTTCACAATATGCACTTCTATTTAGCCAGCGTTTATTGTAGTAAACTCTTCTTAATGAGATTCACTCACTGTTTATAAATGTTCTGGTATGCATTCTTTATAGTGAAGTGTTACATCACATCTTATTTATTTTAGCAAATCAGTATATTTTCTGTATTTAATGATAAAAAGTTAGTTTTTGAGATTTATTTGCAAATACACTTTTTTCCATTTGGCACTATGGTTTGTTGCCTACTTAGCTGAATATATAATGTCAGCTTATCCTAAGGCTGTCCACGTACTTAATTTACTTAAGTATTCATTTTAAGTAAAGCGCTCACTGTGTATAGGAATTTGTATTTTGGAGGTGCTTGATCTATCTACAAAGAAAAATTAGGAATTACTTTATTATAAAATGCTCCTAGAAGTCTTAATTGTGTTTATTTTTTAAAAAACTGTAATGTTAGACTTGTGTGCATGGAAGTAATTAAGGTACATCATTATTGTAGTTTAAAAGTTGTACATGATAAGACATATTTTGTTTTTACTGTATGTTTTTACTGAATGATCTATTCCCCATCCCAAAGCAAGCATGAATAAAATTAGGTTAAATGTAGCATGTGGCATCGCAGTCTCTTAGAATTTGTCTCATCTATTTTACTTTATGGAATACTGTCTGTATCTTTGGTTATCCTGTTTGAAGAAAAAGGACAAATAAAACATGGCCAGCAAATATGGCTCCTGTTTAACTCTTTGGCTTCCC EMBV3_30961 GCTCTGGTCTCTGACCCTTGCAGTCTTCAGGAGATACAATATTCATTATTCTGAGGAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09778 TTAAACTGCTTGACTGGCCTAAACCACACTCTCCCATCCCATACCCAAGCAAAATTCTTG Gene GeneID:518806|FBXL7:XM_002696446:91_cdna Constitutive 0 NULL GeneID:518806 20 GENE FBXL7 NULL F-box and leucine-rich repeat protein 7 EMBV3_36603 ATACGTTTCTGGAACATTACGATTTGGAATGTGGTGTTGGAAAAAATGGATCAACGATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38269 GCAGCTTTTGGCCTCTGTAAGCATGTTTTAGAACTTAAAATACTATTTCTGCAGCATACC Gene GeneID:506546|DZIP1:XM_002691969:26_cdna Constitutive 0 NULL GeneID:506546 12 GENE DZIP1 MGC142440 DAZ interacting protein 1 EMBV3_09345 GGCTCATACTGGTATCCTTGGATTTAGTTTCTTGCTGCTGATAGTCGCTCTCCTGGCTTC Gene GeneID:520243|SLC38A6:XM_002691023:370_cdna Constitutive 0 NULL GeneID:520243 10 GENE SLC38A6 NULL solute carrier family 38, member 6 EMBV3_20510 GGAGAATCTGGGCTACGTATAGGGATTGTCATATTCAGATGGAGCAGCTTGTCCTGCCTG Gene GeneID:538512|ZMAT3:NM_001076108:26_cdna Constitutive 0 NULL GeneID:538512 1 GENE ZMAT3 MGC151970 zinc finger, matrin type 3 EMBV3_07484 GAGCAGATCCTCAGCCTTCCAGAGCTCAAGAGACAGCCTGAGCTTTGAGGACTTCTTGGA Variant GeneID:510141|CIB1:NM_001075433:102_cdna 309^361 1 EMBV3_24156 GeneID:510141 21 GENE CIB1 MGC140635 calcium and integrin binding 1 (calmyrin) EMBV3_36557 GAGCCAAAAGGGTGTCTGTCACTAAGAATGGCGAGTTATCAAGGGCACATTCCGTCTCTC Gene GeneID:512313|ATP2A3:NM_001114154:87_cdna Constitutive 0 NULL GeneID:512313 19 GENE ATP2A3 NULL ATPase, Ca++ transporting, ubiquitous EMBV3_12124 AGTCACCTCGGAAGCCCATGCTTTCCTCCAAGAACTCTCACTTCATTCGGTCAGAGCACT Gene BVV0102_077739 - 1 EMBV3_33099 GK000017.2:55853703-55858839 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04655 ATACATGACGAAGTGTGGTCACAGCTTTTGTGAATGAGCTCATTCTCAAACAGAAGCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23087 TGGCTGCCACTGCGGGCTTCGTTTCCACAGGAAATGATGGACATCAAGCAGTTCATTGAT Variant GeneID:539992|LYPLA1:NM_001034688:47_cdna 488^664 3 EMBV3_10452 GeneID:539992 14 GENE LYPLA1 MGC126967 lysophospholipase I EMBV3_01987 AGGAGCAGAGAGTCCCATAGCTGTCCTGAGATTCCAAGACAGGAGAGACAACAAGTAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17611 GTCAAGAAATTCTGGAACTTGAAAAAGCAGTCAGGGCCTCCAGAACTGAATTAGCCCTGG Gene GeneID:787607|PPP2R3A:NM_001102346:87_cdna Constitutive 2 NULL GeneID:787607 1 GENE PPP2R3A MGC152251 protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha EMBV3_02418 CCCTGGGGTCTTCGATTGGGGTGCAGTGTGCAACTCCTGGCCGACTGATTGACCACTTGG Variant GeneID:534721|DDX47:NM_001046385:104_cdna 384^455 1 EMBV3_07535 GeneID:534721 5 GENE DDX47 MGC137784 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 EMBV3_10234 GGTTACCCGAGTTTCTATCCTGTGCTAAACTAAGTGACGACAGTGTACTGAAGAGCTGGG Gene BVV0102_050161 + 1 EMBV3_00090 GK000002.2:38838128-39142478 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232083 TCONS_00030692 2 XLOC_141569 XLOC_016945 NonCoding TCONS_00030692 XLOC_016945 NonCoding NonCoding - 11:27307073-27307552 - TSS21691 479 1 TCONS_00030692_1 34 0.369519832985386 1 0 5.5868060809516e-05 0.000130688257443542 1.01817252235027e-05 2.3705861395476e-05 7.5277733570961e-05 0.000146876865797368 1.38719991548288e-05 2.30344432974922e-05 4.41495801372459e-05 3.55964851158234e-05 1.05858365363841e-05 1.58767605117036e-05 1.72731652930942e-05 0.00026714101399094 8.70215884316647e-05 0.00206968677146272 0.00207289587646481 0.000738456697488396 5.4060643990906e-06 4.16789203195186e-05 3.5116551268594e-05 0.000237802526643714 0.000414230875993087 0.00080530142092549 8.5859455274109e-06 4.60036489898077e-05 5.69759934283475e-05 7.0493354868441e-05 9.80835620885628e-05 7.01801771417703e-05 XM_005194400.1 FAM217B PREDICTED: Bos taurus family with sequence similarity 217, member B (FAM217B), transcript variant X1, mRNA. 2e-57 226 88.33 0.37160751565762 0 noncoding 0 0 0 0 -1.70767795796122 0.0187036130359615 -0.496660969168083 0.000990531285618173 GAAAATATCTGCCTATGAGAGTCTTGATTGAAGGCAGAGGAGAAGGGGACGACAGAGGCTAAGATGGTTGGATGGCATCACTGATTCGATGGACATGAGTTTGAGCAAGCCCCTGGAGTTGGTGATGGACACGGAAGCCCAGCGTCCTGCAGGCCACGGGGTCCCAAAGAGTCAGACACGACTGAGCCACTGAACTGAACTGAACATACAATCGTTTCTCCAGGTGTTTTGGTTACCCGAGGTTCTATCCTGTGCTAAACTAAGCGACGACAGTGTACTGAAGAGCTGGGTCATTTCCAAATAAATTAAAGTTCTGAAACATTCACGCCTTGAAAGGACCTCCCTTTTACACAGAAACAAAAGAGATTTTTGACTATCCAATAAGAGTGTCTGGCACCATCCTGACATGTGAAACGTAAGAAAGCAATTTGTTTTGTTTTGTTTGGTTCTGATCTTGGGTGTGTGTGTGTGTGTGTGTN TCONS_00027373 . 5' 43375 TCONS_00027373 . 5' 43375 EMBV3_06906 TCTGGCAGTTCTGTCTCTGCCACTCTGATGCTGTTTGGCTTATGCAAGGGCAAGATGGCA Gene BVV0102_072446 - 1 EMBV3_41366 GK000010.2:67569960-67575879 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017677 TCONS_00017674 TCONS_00017673 TCONS_00017676 TCONS_00017678 TCONS_00017672 TCONS_00017675 1 XLOC_009082 Coding TCONS_00017678 XLOC_009082 Coding Coding GCH1 10:67574383-67631337 = TSS12035 3173 1 TCONS_00017678_2 249 0.0293098014497321 6 0.944392744894913 0.000130658163614666 4.28973781645307e-07 0.000602206297757689 0.00119302378741195 0.000466796184144669 2.87091419829889e-05 5.83307085408514e-07 2.1822032357661e-07 9.63496100531994e-08 9.91893476051216e-05 6.7959922368828e-08 1.30607864439252e-10 6.24492361109645e-08 1.18171783994549e-06 3.54450551932073e-10 0.00342399806963956 0.000154392790761335 0.00535096056336914 4.96066908017808e-10 3.25396284326541e-10 9.36723156933022e-06 0.00133521533569966 0.0024417616874709 0.00700761883374525 1.02048172537601e-07 0.000350155521044337 0.000112837481808526 1.9860995643774e-09 0.000348295486134721 0.000203448284609922 XM_002690949.3 GCH1 PREDICTED: Bos taurus GTP cyclohydrolase 1 (GCH1), mRNA. 0.0 5573 100.00 0.973526630948629 NM_000161.2 GCH1 Homo sapiens GTP cyclohydrolase 1 (GCH1), transcript variant 1, 0.0 1245 85.05 0.346990230066183 TCONS_00017678_2 sp|P30793|GCH1_HUMAN GCH1_HUMAN GTP cyclohydrolase 1; 2e-168 470 91.20 0.995983935742972 1 coding 0 0 0 0 -0.0108138749740304 0.92808963910346 -1.27136711466384 0.00204311844827325 AGTGAGCGCCGTGACGCCAGGAGACTCGGCCAATAGAAACGCCCCGCGGCGCCGACCGAGCCGCCAGCCCATAAAAAGGAGGCGACACAGCACTCTTCTGGCTCGCCTGTTCCAGACTCGGAACGTGTTGCTGACTCCAGGCCTATCTTCCTCAGGTGACTCGGGTCAGAGCCCACTCCCGGCCCGGGAAGTTCACCTGAAGTCCCTCACGCACCCGAGGGTCCTTCCGGAGCGGCAGCGACGGGTCCATGGAGAAGGGTCCGGGGCGGGTGACGCTGACGTCGCGGGGCGCCAGGTGCAGCAATGGGTTCCTCGAAGGGGAGCCGCCGCGGCCCGGGCCAAGCCCGCCCGCCGAGAAGCCGCCGCGACCGGAGAGCAAGAGCGCCCAGCCGGCGGACGGCTGGAATGGCGAGCGGCCTCGCAGCGAGGAGGACAACGAGCTGAACCTCCCCAACCTGGCGGCCGCCTACTCGTCCATCCTGCGCTCGCTGGGAGAGGACCCCGAGCGGCAGGGGCTGATCAAGACGCCCTGGAGGGCGGCCACGGCCATGCAGTTCTTCACCAAAGGCTACCAGGAAACCATCTCAGATGTCCTAAATGATGCTATATTTGATGAAGACCATGATGAGATGGTGATTGTGAAGGACATAGACATGTTTTCCATGTGTGAACATCATCTAGTTCCTTTTGTTGGAAAGGTCCATATCGGTTATCTTCCTAACAAGCAAGTTCTTGGCCTCAGCAAACTTGCTCGGATTGTAGAAATCTACAGTAGAAGATTACAAGTTCAGGAGCGCCTTACGAAACAAATTGCCGTAGCAATCATAGAGGCCTTGCGACCTGCTGGAGTGGGGGTCGTGGTTGAAGCAACACACATGTGCATGGTAATGCGAGGAGTGCAGAAAATGAACAGCAGAACCGTGACGAGCACAATGTTGGGGGTGTTCCGGGAGGACCCGAAGACTCGGGAAGAGTTTCTGAGCCTCATCAAGAGCTGAGCCTCAGCTTGTGCCACGTGATTTTCAGATCGTGCAGCTAGAAGCGTTGTTTTGTCTGGTCTTAATTGTTTGTACATTCCACTTCCAGTTGTTACAGATGTGAACTCTCATCTTTGTCATTAATTGTATTTAATAATTATTTATAGCAAGTCAAATAAAAGTAATTAATTAAGGGGTGAGCCCTGAATTTTCTTCTTGCCACCTTTTAGTGGCAACATTCAAGAAAACTGCCAATAGTGTAAGTTGCAACCCCATGGACTATAGCCCGCCAGGCTCCTCTGTCCCTGGAATTCTCCAGGCAAGAATACTGGAGTGGGTAGCCATTCCCTTCTCCAGGATAGTGTAAGTTACTTATATAAAACCCCTGCCTTTCAGGTAACCTGAGGGTGCTGGGAAGGGAGAAGGATTCGTGTGTTTTGTTCAGAGTATGGTAATTTGATTCAGAAGCATAGCAATGTTGGGAATGGGAGAAAATTATGGTCAGTATGTTTATTTTACCCTCTCCAAACAAAAATGGTGTCATGCTTGAAATAATTTATATACAGTGTGCAGCATTGCTCTGCAAATTCAAAATCCAAAAGGCTCCACTTTAATCATGATTATTTAACCACCAGTGACACTTTATTTTTTATATATTTTTTAAACTATCCAGTTGTAACATGTCACCAAGGGAAGGTAAGTGGAATATCTATGTATTTTAATTTCACTATGAGTTAAAAAGGCAATTTCTACCTTCTGTTCTTTTTAAAATTCAAGTACAGGAAATTAGTTCCTGGAGTTGTTTACGAGTATATTCTCATGTCAATATACAGGGATTTAGACATTTAACTCTCTGTGCCTTGAGGAGAATATCACACCATTTAGAGTGTAGATACCTTTGCCTTTTTTTTTAAAAAAGCCATTATTTTATAAGACTTAGTCCTGACATTGCAAATAACTAGTTCTCACAGTTCTACCTTTTCATTTTTCTTGGGAGCTTACTTTGTGAGTTCCTTGTAGATGCCGCAAAAAAAAATTTTTTTAACCTATCAAATATTTTTCTAAGTATTTACAGAAACTTTTGAAAGTGTCCATCATTTTCAGGTTTGCAGAACCATAGCTTCCGGGAGCGTGAGAGAATGCAGATTGCACACTGAACTGTTTTGAGCTCTGTCCCATGTCTAATGAAAACGATTTTGTTGGTGTCTGTGAAAATGCACCATCATTTTCTGGAATGAGTGTGAAATACTGGAAACTGGTATACTAGTTTCCCGTGTGGTCCAAGTGGATCTTATCTTTGGTGTGACTGTTCAAGTGGGATAGGTCTTTTAGTCCAGGAAGCTGCTGCCTTATTAATGATTATCTTAAAATTTCCTCCACTGGGGCAGTGTGGGCCAAATCGAAACAAACAACAACAGCTAAAAACCCCAACTCTCTGCAAAAACAAACACGGTTATTCCATGGAGAAGTCTCTGACATGGAGAAGGCTGACACTGTGCTCTTCAAATTTATCCTGCTACCTTAACAAGGATTAACTCCATACTTGCTGTAACTCTGGCAGTTCTGTCTCTGCCACTCTGATGCTGTTTGGCTTATGCAAGGGCAAGATGGCAGAGGTGGGTTTTTGTGTGTGTTTTTTTTAAATTTTAACTCTTCCCTACTTCTAGTTCCTTTTATTTTTTTCTATATTTGGAGTTTCTAAAGTAGTTTGGTGGTTGATTCTGAGTTCCTTTTAAAATCTAACCTGATATAGACATTATCCTGTTTAAAATTTAGACAGAGATAGAATTAACATTCATCTCATGCTTAATATTTTAAAGTTTTTACAGCTGTGACTTGGAGGACCAAAGAAATTGTTAGCTGTTAATTCATCTTCCTGAAATCAATTGTATTCCTTTTTAACTCTTTAAGATTCCCTAGAAGTGTTCTCATAAAAGTTTAAAATATCCATGGTATCAGTCTAGAGTATTGGTAAATGCAGAGTAACTACCTTGTCTGTTTTACTCTGGTCTGTAAGTTATTCAAAATTACCTTTTCATATCTGTGGCCTTGAGTTCATTTCAGAAGTTTTTAAGAATTTGATGCATTTAAATACACTATTCAATTTAATTGTTCAACTTTTATGTATGGTGTATATTGTTCCTGAAGTTGGTTTTATTTAAATTATTAAACTGTTATGACTTTGTTCTTGTGAAA EMBV3_18995 CTTGGGATAGCAGATCTCTCAGCAAAGAGTGCCTCAGTTCCAGACGAACTTGGTGCCTGT Gene GeneID:514601|LOC514601:XM_002686161:305_cdna Constitutive 0 NULL GeneID:514601 3 GENE LOC514601 NULL similar to Protein FAM102B EMBV3_03435 TATTTAGGCCATTACTCCTCTCTCATGCACATACGTACTCCCTCTCCCTCATGCCCCTGT Gene BVV0102_404142 - 1 EMBV3_00562 GK000015.2:68698589-68996827 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08346 TCTTTCTTCCCAGTTCCCACTCTTTGTAACCGGAAGTGTCTGTCTGTGTGGGTGAGGACT Gene BVV0102_129276 + 0 NULL GK000019.2:42567656-42576980 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097007 TCONS_00097008 1 XLOC_058151 Coding TCONS_00097007 XLOC_058151 NonCoding Coding - 19:42575248-42576646 - TSS71990 776 1 TCONS_00097007_1 110 2 0.445955619183966 0 0.000168337012372924 0.000751253146308831 0 6.36230227894978e-06 0 0 0 0 0.000163321952066905 0 0 1.10925481942355e-05 0.00217620361193365 0 0 0 0 0.00061505214116716 0.00139794433315842 0.00125129946702308 0 0 0 9.85354659533427e-05 0.000644576979466999 0.000146742196294196 0 0 0 XM_003583606.2 HAP1 PREDICTED: Bos taurus huntingtin-associated protein 1 (HAP1), mRNA. 2e-110 403 100.00 0.286082474226804 NM_177977.2 HAP1 Homo sapiens huntingtin-associated protein 1 (HAP1), transcript 4e-43 179 69.61 0.417525773195876 TCONS_00097007_1 sp|O35668|HAP1_MOUSE HAP1_MOUSE Huntingtin-associated protein 1; 7e-06 44.7 63.16 0.318181818181818 0 noncoding 0 0 0 0 0.173213061094001 0.304513845599107 -0.0725102946723253 0.257436776022992 GGCCAAAACAAACATGGGGGCTGGGATTCTGGAACCCGGGGTGCCAAACCAGGACTTACGGAGGCTGGAGGAGGAAATGGCCAACCATACTCCGAAAGCCTGGGAGGAAGGGGGCCCTTCTTGGACCCCCCAGGCAATTGGGATTAAGGCCTCTGCCAGCAAGGGCCACAGTCGGAATGATCCCCTGGCTGAGTCTGAAGGTGCGCCAGGGTCTCCTACAAGGCTTTGCTGTTCCCCAGTAGCCTGCAGAGGCCCCACAGACTGCCTGAGGCCCTTCCTTCTGCTGCCTGGCCAAGCCCCACTCTCCCCAGACGCCCCTTCCCATGCTCCAAAGCAGGACCCCTGATCTGTCACTAGCTCACCCCAGACAAGCCTGGACTGGAACTTGAGGGCCCAAGCCTCAAGCCTCTTCTGGGAGAGGCTGAAGGAACCCCGGCCCTTGTTCTGCAGCTGGTGCAAAAGCTGTGGCTGCTGGACCTGGGGCACGTGGTGGCTCTGGGGGTGAAGAAGCCCAGGGGGAGGCCCCACCAGCTACCAGACCCAGCTGGATCTCCTGTTCTTGGCTCTTTCTTCCCAGTTCCCACTCTTTGTAACCGGAAGTGTCTGTCTGTGTGGGTGAGGACTCCCTCTGCCTGGTGGGGGCCTCCCCTCCCCATCTCCTCTCCTCCCACCTGTGACCTGTGAGTATCCAGGCCCCCTCCCAAGGCCCTGTCACCCACCCACATCTTCTCCTCAGTGCTCCTTGTTTCCTTGTTCTAGGTTTTTTCCCTCTCCCC TCONS_00097008 s 5' 0 TCONS_00097008 s 5' 0 EMBV3_34129 TCTCAGAAGCAATCTGTGGTTCTAGCAGGTTCTACCCCATCTGTGTGTGGATGTCCAGTG Gene GeneID:618399|GNG7:NM_001113314:26_cdna Constitutive 0 NULL GeneID:618399 7 GENE GNG7 NULL guanine nucleotide binding protein (G protein), gamma 7 EMBV3_14279 CAGAATGTACTCAGAGACGAAAAGTCTGCTCACAGGCCTAATACAATCACAGCTTTGGTG Gene BVV0102_128543 + 0 NULL GK000009.2:948255-2503602 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15756 GCGGCCGCCGGCGACCTGACCAGTGAAGAGAAAACCTCGACTTGTTGTATAAGTACATTG Variant GeneID:519789|LOC519789:XM_002694803:645_cdna 88^832 1 EMBV3_42857 GeneID:519789 18 GENE LOC519789 NULL similar to Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) EMBV3_08606 GGTCTGGTGGATTATGTCCTGGAAACTTGCTCGGTACATGTCAGGTTTTTCCTAGAGGGA Gene BVV0102_128065 - 1 EMBV3_43635 GK000020.2:26280531-27745394 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08057 CAGCATCCTGATGTTTGGGAAAGGTCTATTTGGTTGAGGAGGTATTACACAGAGGAGCAA Gene BVV0102_292697 + 0 NULL GK000021.2:48800705-48843724 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38369 GCTCCAGAATTTCAAGGGCAGCTTAAGGAGATGACACTGGAACAGCACACTCAGAGACAA Gene GeneID:617222|DPP10:NM_001078070:6_cdna Constitutive 0 NULL GeneID:617222 2 GENE DPP10 MGC152233 dipeptidyl-peptidase 10 EMBV3_29488 GCCAATCCAAATGGCTTCTGTGCTACAGGCTACAGGTGTCTAGCATTCTCTGTCTCCCAA Gene BVV0102_208931 + 1 EMBV3_06767 GK000002.2:92126363-92325179 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23691 CTCTTGAGAACTGCAACCAAGACCTCCTCCAGCATCACGCAGACCTCACGTGTACAACAA Gene GeneID:407219|MITF:NM_001001150:11_cdna Constitutive 0 NULL GeneID:407219 22 GENE MITF NULL microphthalmia-associated transcription factor EMBV3_12723 CCAGGATCTCTTTCCCTGAGGACCCAGCCCTCGCCTCTGCGAGAATGAACATATTTGATA Gene GeneID:507189|PRCC:NM_001045961:100_cdna Constitutive 0 NULL GeneID:507189 3 GENE PRCC MGC140094 papillary renal cell carcinoma (translocation-associated) EMBV3_04811 AGATGCCAAGGGAACTCCGAAGTCTGATGCTGAGCCAGAACCCAGCAGCCTGTCCGAGAA Gene GeneID:508234|SIPA1:NM_001101895:542_cdna Constitutive 0 NULL GeneID:508234 29 GENE SIPA1 MGC148481 signal-induced proliferation-associated 1 EMBV3_20924 TCCATGAAGGAGGTGGACGAGCAGATGCTCAACGTGCAGAACAAGAACAGCAGCTACTTC Gene GeneID:100295973|LOC100295973:XM_002697606:91_cdna Constitutive 0 NULL GeneID:100295973 23 GENE LOC100295973 NULL similar to tubulin, beta 2 EMBV3_10540 TTCAAAAGGAGGTGGAGGGATACGCGGGCCACAGTCGGAACTACTTTCAGGAGGAGGTCA Gene GeneID:100296067|LOC100296067:XM_002698351:87_cdna Constitutive 0 NULL GeneID:100296067 26 GENE LOC100296067 NULL hypothetical protein LOC100296067 EMBV3_13958 TGAGTTGCTAAAGTGAGCCTGGCTTTAGAGGTGCCCCCTGAAAAGTGCCGCTGTGCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10798 GACGAGCACCAGCTCCTGACCAACCCCAAGACCAGATGACGTGCTCCTGCATCGCACGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37686 AAAAACACTGTGCTGCTTATTCTCCAGTAGCTCCACCCAGACCTTCCCCTCTACGTTCTC Gene BVV0101_027826 + 0 NULL GK000028.2:13246448-13273009 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159064 TCONS_00159063 TCONS_00159061 TCONS_00159060 TCONS_00159062 1 XLOC_097343 Coding TCONS_00159064 XLOC_097343 Coding Coding ZNF248 28:13223727-13249040 = TSS119284 4996 1 TCONS_00159064_5 578 0.103482786228983 6 0.802860303413401 0.000159795445303196 5.08871149564177e-05 0.00025557744216991 0.000113212574741189 9.62434983519975e-05 1.18289334584625e-10 6.96019769108912e-08 7.17077277762831e-08 0.000258298342123285 0.000124548602782283 9.15929616109112e-05 2.70977911471475e-05 6.45754442907234e-06 4.77308210779131e-21 4.26768350132268e-13 0.00102117798688016 6.44818906906826e-20 0.000232747677851906 6.75645807000712e-05 0.000125238543924286 5.6129644433485e-05 0.00016155691560512 0.000143712049136844 0.000299658759772614 0.000322119262901618 0.000236508016877943 0.000247902068822462 2.90813163701394e-05 0.000132629513658466 0.000127085947451681 XM_005226261.1 ZNF248 PREDICTED: Bos taurus zinc finger protein 248 (ZNF248), transcript 0.0 8686 100.00 0.963771016813451 NM_021045.2 ZNF248 Homo sapiens zinc finger protein 248 (ZNF248), transcript variant 0.0 2791 81.49 0.566653322658127 TCONS_00159064_5 sp|Q8NDW4|ZN248_HUMAN ZN248_HUMAN Zinc finger protein 248; 0.0 994 82.90 0.998269896193772 5 coding 1 1 0 0 -0.147154018700206 0.314720157803347 -0.00884698524912368 0.886886873803418 GCCTTCTGCTGCTGGCTCGTCCTTCCGCGGCCTCCAGCCCCTCGTGGGAAACAATCCCTATCCTTCAGGTCCACGGGCGAGGGAGCTGCGGGGATCGAACCCAGGTCTCCAGCATTCTTTATGGACTGAGCCACCAGGGAAACCCGGTAATAAATCAGTAAGAAGCAAAAGTTTACATTCACTCGGTGAAAAGTATCAGGTCTAAGGTCAACATAAATGGGAGCCACACATGAGCAGCTCTCCCTCCTCCACTAAGAGTGAAAAATGAACAAATCCCAGGAGCAAGTGTCATTCAAAGATGTATGTGTGGACTTCACCCAGGAAGAGTGGTACCTGCTGGATCCTGCTCAGAAGATATTATACAGAGACGTGATCCTTGAAAATTATAGCCACCTTGTCTCAGTAGGGAATTGCATTACTAAGCCAGAAGTGATCTTCAAGATCGAGCAAGGAGAAGAACCTTGGATACTAGAGGAAAGATTCCCAAAACAGTGGCACTCAGAAGACTGGAAAGTTGATGACCTAATAGACAGCACCCAGGAAAATCAAGATGAACATTTTTGGCAACTTGCTTTCACCAGCAACAAAACATTAAGTACAGATAGTGGTGACAGAGTAAAGAAAACTTTAAATCTAGGTACAGACTCCATTCCTTCGAGCAATTTTCTATATAAAATATGTGACTCATGTGAAGTGAGTTTGAAAAATATTTCAGGCTTAATTATTAACAGAAAGAACTATTCTGGAAAGAAGCCTGATGAGTTTAATGTATATGAGAAATTGCTCCTTGATATTGGGCATGACAAAGCTCCTCTTGGAGGGAAATCTTATAAATATAATCAAAAAAAGAATGTCCTCAATCATGGACAGGATCTCACTCAGTCAATTTTTGACCAGCCTTTTGAGTATAATGAAAATGGAAGAGGCAACCATGGAGAGGCAGCCTTTTTCACAAATAAGAAAGTTCAGATAGGAGAGACACACTGTAAATATAATGAATGTGGAAGAAACTTCATCCAAAGTTTGAAGCTCAGTTTATCTCAGAGAACTCTTTTTGAAATGGAGCCATGTGAATGCAGCATTTGTGGTAAGTCCTTCTATATGGATTTAAGATTCGGACATCAGAGAGCTCTTATGGGGGACAGTCCTTATGAATATAATGAATATGGGCAAATTTTCTGCGGCAATTCAACTTTTGTTATCCATCAGGGAACTTACACAGGAAAGATTCCCCATGAATATAAAGTCAGTCACAAAACATGGGAAAAGTCAGCTCTCTTTAAACATCAGATAGTACACATGGGGGGAAAACCTTATGAGCACAATGAAAATGGAAATACTTTCAACAAGAAGTCACATCTCACCCAACTTCGAAGAGCTCACTCAGGAGAAAAAACCTTTGTGTGTGGTGAATGTGGGAAAACATTCTGGGAGAAGTCAAACCTCACTCAGCATCAGAGAACACACACAGGAGAGAAACCCTATGAATGTACTGAATGTGGGAAATCCTTTTGTCAGAAACCACATCTTACCAACCATCAGCGAACACATACAGGAGAAAAACCCTATGAATGTAAGCAGTGTGGGAAAACATTCTGTGTGAAGTCAAACCTCACCGAACATCAGAGAACACACACAGGGGAGAAACCCTATGAATGTAATGCATGTGGAAAATCATTCTGCCACAGGTCAGCCCTAACTGTACATCAGAGAACACACACAGGAGAGAAACCCTTTATATGTAATGAATGTGGTAAATCCTTCTGTGTGAAATCAAACCTCATTGTACATCAAAGAACTCACACAGGAGAGAAACCCTACAAATGTAATGAGTGTGGGAAAACCTTCTGTGAGAAATCAGCTCTCACTAAACATCAGAGGACTCACACAGGGGAGAAACCCTATGAGTGTAATGGATGTGGGAAAACCTTTAGTCAGAGGTCAGTACTCACTAAACATCAGAGAATTCACACAAGGGTGAAAGCTCTTTCAGCATCCTGAACATTAAGAAGCCTTCATCCACGCTTTCAAATATGTTATACAGGTTTTTAAAATGAGATGAATGAAACCCAAAGAATATCACAAATTCCTTTAGAGAGTGAGATTTTGTTGTAATTCAGATAATTAGTACTAGAATAAAACCTTATTCATGTTTTGAATATGTGAAAGCTTTCCAAAAAAAGTAAAACTTTTCATCAGAAAATTTATATTGAAGGGAAATTCAGTTACATAATATGGTGGAAAAAAAAAACACCTTTGTCTAGAATTTATGTTGTGTAGTGCCATATTCTGGATGTGATACAAAAATTTTATTGTTGTTAATATAATAGGTGATACTCATTTGCAGTCATATTCACAGTGGAATCTGAAGTTTAAAGACATTAAATGACAACAGCATTAAACATTTATGTGAAGAGTCCTTGATGTTTGCAGGCCTTTTGTTGGTATGCTAATATCATAGAAATTTGAGGTATTCTTGATTGGTATATTAGAGCCTAACATGCTTATGAAGAGAAAATCTAAACTCTTAATTAACTGTTAGAGTCTATATTAACATTTCCCACACTAGATACCATCAATGTCTTTTTAGGTTGTAATAATTATGTATATTTGTATATGTAAATGTATTTATATACACTTACCAATACACAGTGATGTGCTACAGTAAGTTTATACTGACTTGCAAGCACTGCTGATAAATTTTCAGGAAGTTTATGAGCCAGTTGTTAAACACAGTCATTATTTTAAAGTATTAATTTACAGTTAAATATTCAAAAAACAAAGGTAATACATACTCAACACTCATCATTTCCTAATTATTTCACAGTGTTTTGCTATTATCTTTGTTCTTTAGGTTATCTGTATTGTTAAATCAGCATGATGAATATTATATAATGATGTAGTACTATACATCTGTGACCAGCCCTACGTTCAGTGCCATTGTATTGGTAGTGTGGCATTAGTGGCAGTATTTACAGTGGTACATCACTGTGTATATATGCAAATACATTTGGCAAATTTAAAATACTAGCCACATACCCCTTCTCCCATTTCCATAGATAAATGGCTCTGTCCATTACTGCTGAATGGCCTCTTCAAAAAAGAAGCCAAAATATGTTTTGGGGGAGGTTTTTAACTACCTATGCATCAATCCTATTTTCAGTACTACCAGAGACTCTCTGTAATGTGGCCAGTATATGCTGTTTTACTACCTGTTGCTTACCTTTCTTCTAATTTTGCTGGCATATGTGAATGAGTATGGCCATTATTACTGAGCTTCCACTTCGATAAAAAGGCCAAACAATATTTTCCTGAAGTTACTCGGCTGCCTTGGGTCAGTCAATAATGTGAATGCTGTTAATAATAATGATAATTACATAAATTTTGCAAAGGTTAACATCAGTTATGAACAGTAACGCTCACGGTATTCGGCAAATAAAAGTAGCGTTGTATAATGAAATGCTTCTGTTCTACTCTTGGTGCTTTATTGCTGTATCTATTTGGGCATGATGTGTGTAACCCAAGTTGTATGTAACTCAGGAACTATGCATTTGTATCTAATTTAATAGAATGTAATATACTATCTCTCTCTCCTTTGTCCTACCGTTTTCTTTGCTTCTTTGGAAAACACTGATAAGCAGTTCCAAGAAACACTGCCCCCCAAATAGCCATTCCCTGCTTCCTCCTTGTTGGGCCATGTTTTGTCTTTTTGTCCATCCTTTCCCCAGATGATTTAGGGGTAAATCCATATTAGTCTAAGTTAATCATGAATATTCTGTTCTAATGATTTTGTTGGGATGGACAGGTGAATAATGAGATACTTGGAAAATATTCTCAGTGCTTCGGGGAAAGAACTCAGTGATAAAATATTGTCATGACATGAGAACAGATTGTCTCTCATCTGCTGAACTTTTTCATGGCTGTATGTTATCCTAGATTATAGTTGTGGCCTGGTAGGGCAATAGCCTGAAGAGAACAGTACACAAGATGGGAAAAACCTGACTCAGAGGTACTGTCACTGAACTGCACAACTCTTTCTGGACCTGCTCTCTGCTCAGTATTTAATTCAAATACTAGGACAAAAGAGGCTTCTTGTTTATTCTTGGAGATGTCTGTTATTTAGCACTGAAGGCATTCACCTGATTCAAATGAATTCTTTTCTAATAGAAGTGTTAATGTTCTATTTAATGTTCTGGTGTTACTGTTCTAGTTTTAGAGATGAATTATTTTCTTTGACAGATTAATGTAGGGAGGGCTGTTTGTATCAGCCATGGTTCTAGTGAAAAACCATTCTGATCCAACTAAGAAGACTTTCATGGCAGACTTACTACAGTGGTTTGCCAGAAACAAGGGATATTGAAGCACCTAGAGATTAGTGTCCCCAGGAGGCCATTACCCTTCTAAGTCCATAAGGGCAAAGGATGGAAGCAGGTGTTCACCAGAGCCCAATAAGAGCCGCTGCTCTTGTGGAGGAGGGGCCATCTCATGGGAGATATTGTCATCTCCAAAATTATGGACCACATTTCTGGAACCCAATCAGATGCCATCTGCAAGTGAGCCCACGTGGGCACAGAGAACGTAGAGGGGAAGGTCTGGGTGGAGCTACTGGAGAATAAGCAGCACAGTGTTTTTTATTCCTGTAAACTCCTATATAATGGCTCAGTATTAGAAATAAAATTATTCTTCTAGTTGAAAGTTAAGTATTTCTGCTTCATTGTGCTTTTATGCTGTCATAAGTAAATTCCTTTTGGAACTGAGCACTGTGGCAGGTATGTCTCTCGTTTGATATATGTGAAGCAGACATGTTAACTTGATTATTCATATAACCCCACATGATATTTCTTGTCATATGTGGTGTGAGGTTAGCAGCTCTGTGTTCTTCCAAATAAATAGCAAGTCCTCTCTGCACTGTTTGATTAATTCGTTCTTTTTCTTGTTGGCTTGATATGACCACTGGGGTAACTGGGTACCTCTCTAGGTAGCATAATAGTAGATG EMBV3_20652 GGATTCTGCAGAAAGAAATGCAAAGCCGAAGAAGTTGAACTGCGCTACTGTTTAAGTGGC Gene GeneID:100296742|LOC100296742:XM_002692281:1633_cdna Constitutive 0 NULL GeneID:100296742 13 GENE LOC100296742 NULL hypothetical protein LOC100296742 EMBV3_20692 GGGACAACAGCATCACAGGTAGATGAAGGAGTCGCCTCTACTTTAGGACAACCTGCTAAG Gene BVV0102_313340 + 0 NULL GK000011.2:46803362-47050648 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28174 AGGAATGTTGCATGAATCGTCCTGTTCGCTGTCGCTCGGAGACTTGCCCTGTACATTGCT Gene GeneID:512428|SHANK3:XM_002687990:95_cdna Constitutive 0 NULL GeneID:512428 5 GENE SHANK3 NULL SH3 and multiple ankyrin repeat domains 3 EMBV3_19137 CCCGAAGAGGTACAGAGCGAGGTACAGCGCCTGTGGGTGAAAATCGAGTTTTGGAATTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43197 GTTGCTTGAAGTTGAGATAAGGCAGTTTGGGAGAGAGCAAGGCTGTGTCAGAAGAGACCC Gene BVT0101_036571 + 0 NULL GK000011.2:93157803-93219286 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35306 AGCAACTTCTGTCCAAGAGCACAGAGCAGGAAGGAGTGCTGAGGGAGGAAGGGCTTTATA Gene GeneID:784368|LOC784368:XM_002696405:179_cdna Constitutive 0 NULL GeneID:784368 20 GENE LOC784368 NULL similar to golgi phosphoprotein 3 EMBV3_28184 ACAAGTGGCACCAGACCATCTCACTGGCGCTAATCCTCTTCAGCAACTACTACGCCTTCT Gene GeneID:514263|TMEM39B:NM_001075658:109_cdna Constitutive 2 NULL GeneID:514263 2 GENE TMEM39B MGC139045 transmembrane protein 39B EMBV3_27389 ATGACCTACATCAAATGCGCGCGTAACGAGCAGGAGCAGAACCTGGAGGTGGTCCAGATT Gene GeneID:618320|PRDM12:XM_002691643:353_cdna Constitutive 0 NULL GeneID:618320 11 GENE PRDM12 NULL PR domain containing 12 EMBV3_39962 AGACCCCATGGTCTACGCGGCCATCCAGAAAGGCATCAATGCTGTCAACCAAAAAGCCAT Gene GeneID:526688|ACSBG2:XM_002688884:124_cdna Constitutive 0 NULL GeneID:526688 7 GENE ACSBG2 MGC151952 acyl-CoA synthetase bubblegum family member 2 EMBV3_26537 CCAAATTAGGCTCCCTCCTGTCATGTAGCCTCTTGCATCCAATTGAGTTAAAATGTGTGC Gene BVT0102_224955 + 0 NULL GK000030.2:4879917-4895371 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248988 1 XLOC_151931 NonCoding TCONS_00248988 XLOC_151931 NonCoding NonCoding - X:4893769-4894448 - TSS186209 679 1 TCONS_00248988_1 35 1 0 0 0 0 0.00034243982261971 0 0 0 0 0 0 0 0 4.22575268371189e-06 0 0 0.00112803538258021 0 0 0 0 0 0 0 7.40706883269962e-05 0 0 0 0 0 0 XM_005200572.1 LOC101902870 PREDICTED: Bos taurus uncharacterized LOC101902870 (LOC101902870), 5e-28 129 65.73 0.899852724594993 XM_005276104.1 LOC101928426 PREDICTED: Homo sapiens basic salivary proline-rich protein 2-like (LOC101928426), transcript variant X1, mRNA. 1e-48 197 67.79 0.751104565537555 0 noncoding ATTTTTAATTTAGTTCAAGAAAGCACAGTTCATAGCACAATGCCTGTCCTAGAAAATACATGTTATTCTTCATCTACTCTTGACTGAAAAAGGGCTTGGGATGGGAGCAGCCTGAGGCTGAGGGCTTAAGTGTGTAGCAAGACAACCCAGTGGTCTTTTAGAAAACCAGGAAAAGTTGCCCTTCTCAGGGGGGAATCAGCAGGAGTATGAGAAAAGTACTGCTTGTACTTTTGTGAGGCTACATTCCCCATATATGCCCCTGCTCATTTATTTCCACTGGGATTAATGTGATGAGCAGTTCAGTCATTCCAATTCTTCCATGAAAGTCTGATTTTGCTCCCAGAATTGTAGAAATGAATCTTGACTTTATTTCAATTGGATTTACTTAAAGGCCACACTATATGTAAGGCAAAGAAGTCATACCTGATATAATTGATATGCCAAATTAGGCTCTCTCCTGTCATGTAGCCTCTTGCATCCAATTGAGTTAAAATGTGTGCACCAGATAACAACATACAGTAGTAATTACTAGTACATGCTAGGCAATAACTGCTTGTTCAATGAATTAATGAATGCAATTTGACAAACCTGCTAAATCCCTAAAATCTACTACTACACTCCCACCCCTCTTTGAAACTTTGTCATTCATTAAGCTTAACAAAATCTTGTCTGCCCTCCC TCONS_00243655 TCONS_00243661 . 3' 9425 TCONS_00243655 TCONS_00243661 . 3' 10103 EMBV3_23125 ACACAGCAGTCAAAGGAAGTCCTGCAGAGGGGGCAGAAGGGCACCATCGAAAGCAGTTTT Gene GeneID:784564|WISP3:XM_002690129:166_cdna Constitutive 0 NULL GeneID:784564 9 GENE WISP3 NULL WNT1 inducible signaling pathway protein 3 EMBV3_04754 TTCCTGCTTCATCTGGCAATTTCCTAGATAATCTTACTAAGCACCATCAGAGGAAAGCAG Gene BVV0102_396419 + 0 NULL GK000029.2:13456146-13581142 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166409 1 XLOC_101247 NonCoding TCONS_00166409 XLOC_101247 NonCoding NonCoding - 29:13502683-13505220 - TSS124387 2537 2 TCONS_00166409_5 78 0.693338588884509 1 0 4.02218927723155e-05 0.0002138806907757 0.000138609349921168 1.63661242283833e-05 2.52988407930242e-05 0 6.8959865916938e-06 0 9.33007989561256e-06 0 0 0 0 9.27078088966809e-06 0 0 0 0 0.000282653824571521 7.08654169635543e-05 2.0940157578544e-05 0 0 0 8.46602063647625e-05 8.33126815587283e-05 3.77214623265803e-05 0 0 0 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 7e-65 253 96.13 0.0607016160819866 0 noncoding CGACAGAGGATGAGATGGCTGGATGGTATCACTGACTCGATGGACGTGAGTCTGAGTGAACTCGGGGAGTTGGTGAGGGACAGGGAGGCCTGGTGTGCTGCGATTCATGGGGTTGCAAAGAGTCAGACACGACTGAGTGACTGATCTGATCTGATCTGAATGTTGAACATCATTCATATGCTTCTTTGCCACCTATATGTTCCCTTTGTTGAAATATCTGTACATGTCACTTGCCTATTTTCTTACCTCTTTTTTTTTTTAATACTGTTGAGTTTTGAGTGGTCTTTATATATCTAGGTACTATCCTCTGGAGGAGGGCATGGCAACCCACTCCAGTCTTCTTACCTGAAGAATCCCATGGGCAGGAGCCTGGTGGGCTACAGTCTATGGGGTCGCAAAGAGTAGGATGCTACTTAGTGACTAAACAGAGAGATCCTTTTAAAATATGTGGTTTGCAAATATTTTCTCCCAGTCAGTAACTTTTATTTTAAGCTTCTTAATAGAATTTTTCACAAAGTAAGAGATTTTAATTTAGAAGATGACTAGTTATTTATTGGTATAAAGTGCAAGAATTCTTTGCCTAGAACTTCATATCTTGCTCTCAATTTTGAAGATTTTCTTGTATATTTTCTTTAAGTTTGATTTTTATGTTTTCCATTTATGGTTAATGCTGCATTTTGATTCGATTTTTAGATAAGGCTTGAGATTTATACAAAGGCCTGAAATAATACAAATACCTATTTCATCTTCCTACAAGTGGAATTTCACTTTCAGGCTTCAAAAAACATGTGAGAAGATGGAAGAAAAATGACAGTGTTTATCTTGGGAACACAGCATAGTGCAGAAGCACAGGCCTTGGATTTTGATTATACAACTTAAGGTTCTGTGGTTGAAGTGAAATTCATAAAAAATTTCTTGCTTTTCAGGCTTTTTTGAGGATGTAATAGTAGCATTGATGAAAGAGACTTGTCAGTTGCCAGGTCAGTATAGATTTAAGTCATCTTCATGATTGGGTGCAGCAGATCACAAAAAGGAAAGCTGGGATGGGGTGAAGGATACAGGCTGTATCGATGTTACAGTTTATTTTACACTTTTACCCATCTCTTCATATTACCGAAATCTGTGTTCCTCATCCATCTAGAATCTAACTCTGTCTATCTGAAAACAATATAATAGACTTTTGTTTTTGGAAAATTTTTCCTGCTTCATCTGGCAATTTCCTAGATAATCTTATTAAGCACCATCAGAGGAAAGCAGATCAATAGCTAAATGTTTGCTTACATTTTCCAACAACTGAAAAGAAGGGTTAAAGTGTAATTCCTATTTGAATACTTGGTAGGCAAAAAAAAATAATGCTCTTCCTCTAAAGATAGCTATACCCTGTTCCTTGAAACCTAGGGTTTTTATAAATTGTATTCCATTTTGATTCAAAATTTTCCATAAATTATATTCCATTTAAAGTTATAAAATGTTGGCTATATTCCTTATGTTGTACAGTGTAACTTTGTAGCTTATTTATTTTATGTGTACTAGATGATATCTCTTAATTCTCTACCCCATCAATCATGCCCCTTCCCACTTCCATTTCCCCTCTGGTAACCACAAGTTTGTTCTCTGTATCTGTGAGTCTGTTTATCTTTGGTTTTATCTTTTATATTCCACATACAAGTGATCACATACAGTACTTGTCTTTTTCTGATTTATTTCACTAAGCACAATACCCTCCAGGTCCATCCATATTATTTCAAGTGGCAAAACTTTATTCTTTTCTTATGGCTAATATTCCATTATGTATGGGTGTGTGTGTGTGTGTGTATACCAATCTTCTTTAGCTGTTCATCTGGTGATAGACACTTGCTGCTGCTAAGTCACTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGGTGCTTCTATATTTTGGCAGTTGTAAATGATGCTGCTATGAATATTGGGGTGCATGTGTCTTTTTTAATTAATATTTTTGTATTTTTTGGTTATATACCTAGTAATGGAAGTCCTGCCTCATATGATAGTTTTCTTTTAATATGTTTTTATTTATGTATATTTTTATTTAGTTTTGACTGTGCTGGGTCTTCGTTGCTGTGTGGGCTTTTCTGTAGTTGCGTCATGGGGGGCAGGGGGCTCTTCTCTAGTTGCGGTGCATGGGCTTCTCATTGAGGTGACTTCTCTTGTTGCAGAGCACACGTTCTAGGACATGCAGGCTTCAGTAACTGTGGGACATGGGCTCAGTAGTTGAGGCTCCTGGACTCTAAAGCACAGGCTCAGTAGCTGTGGTGTGTGGGTTTAGCTGGTCCATGGCATGTGAAATCTCGGATCAGGGTTTGAACCCATGTCTCCTGCATTGGGAAGCTGATTCTTTACCACTGAGCCACCAGGGAAGCCCCACATGGTAGTTCTAGCTTCAGTGTTTTGAGAAAACTCCATAATATTTTCCACAGTGACTGTACCAGTTTACATCCCC TCONS_00163141 . 3' 497771 TCONS_00163141 . 3' 500307 EMBV3_23381 GAAAGAACCCAGCAAACTGCTTCTCCAATAAGCTGCCCGCCGTGCTCACCCTCTATGTTA Gene GeneID:532836|AHCYL2:NM_001101143:176_cdna Constitutive 2 NULL GeneID:532836 4 GENE AHCYL2 NULL adenosylhomocysteinase-like 2 EMBV3_01894 TCAAGGTTTGTCTGGGAAATTCTTACACATCAGGAGATGGCTCCGAGGTGGATTTCTACA Gene BVT0102_410377 + 0 NULL GK000029.2:26322752-26356877 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19951 CCACAGTGCTCTCAGTGGTTACGGGGATGCTCGTGGTTTTGGTTGTCCTTTTTGCATTGC Gene GeneID:280761|DCT:NM_001012666:29_cdna Constitutive 0 NULL GeneID:280761 12 GENE DCT TYRP2 dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) EMBV3_12311 CTAGGCCCCATCCTTGTCTCTGGCTCCTTAAGTTCATGTCTGACTCCTTTCCCCAGGGCT Gene GeneID:511582|HGS:NM_001046089:78_cdna Constitutive 0 NULL GeneID:511582 19 GENE HGS HRS MGC134526 hepatocyte growth factor-regulated tyrosine kinase substrate EMBV3_42545 TTACACAGAATACAAATCTTGTTAAAGCCACGAGGCACCAACTTAAAGAGACTTGTAAGA Gene GeneID:615954|CHMP2B:NM_001035472:102_cdna Constitutive 2 NULL GeneID:615954 1 GENE CHMP2B MGC128858 chromatin modifying protein 2B EMBV3_22703 ATGCCTGAACTGGCTAAGTCTGCTCCTGCCCCTAGAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:521525|LOC521525:XM_002687190:84_cdna Constitutive 0 NULL GeneID:521525 5 GENE LOC521525 NULL similar to histone cluster 1, H2bl EMBV3_24458 GGGAGCCATGCAACAAAATTGCGAGTTTAGAGTTTCACTGGACTGAGTGATTGGACCAGA Gene BVT0102_270706 + 0 NULL GK000027.2:28969955-30421576 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156308 TCONS_00156307 1 XLOC_094965 NonCoding TCONS_00156307 XLOC_094965 NonCoding NonCoding - 27:29543182-29565236 - TSS116761 610 1 TCONS_00156307_1 47 0.214754098360656 3 0.972475400172312 0.000166119656527139 1.65743162055545e-12 1.46997421889483e-135 2.59204137812106e-08 0 1.6506232005488e-09 0.000195286480874454 0.000171182599877202 1.96274692900863e-05 0 0 0 0 3.39091703584348e-05 0 0 0 0 0.00124186111722742 9.05001075424474e-10 9.88011892930152e-05 0 0 0 0.000479596692596907 0.000233651530191669 0.000340539471550366 0 0 0 0 noncoding TGCCATATCCTGCCTGCCATCTCCTGCACACGGTGGGGTTTCACTCTGGGACATTTTCCTTCCGATATACTTCTGCCCAACTGGATGCATGTGTAAATGTGATTCCCCATATACAGGTGGAAAAACTAAGATTCAGAGAGAGTTGATTTATTCAAGGCTTAGGTGGGGCGTGGGATGGAGATGATGGGAAGTGTCCACAGGGCCAGCTGGCTGGTGAGCACTTCCTCGAAGCACTGGAAGCATCAGGACACTCAAGAGGGATCAAATCAGCCGGGAGCCATGCAACAAAATTGCAAGTTTAGAGTTTCACTGGACTGAGTGATTGGACCAGATGATCTTTCAAATTCCCTTTAAGGCTCTGCTTCTGTAATCACTTAAGTTGTCTAGTTTGGAATCCCGCATGTCCTTAGGACTGGCCCATCTTCGTAGAAGTCATGTCAATTCAGAAGCACTTGTAGCTGTGGTTTTTTAAGCTCGGAGCTCTTGAAAATTTGTCAGCAGACAGATGCTGGTTTGTGACTTAAGTCTGCATCAGTCGTTTCTGAGAAAAGGCTAACAATTCTTTTAGATTATTTCCCTTTTTCTTACTTTTGCATTGAAAAGTCCTTTC TCONS_00155396 r 5' 416655 TCONS_00155396 r 5' 395055 EMBV3_09785 GATGTAAGGATTGTTTTTATACATAACAAGCTAATCCGACATTATTACAATCTGAAATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11403 ACCTTTCCATTATTCTATTTCACACTTAGATGGAAAACGTATCTTATGAATAGAGACATG Gene GeneID:508836|SNX10:NM_001075375:127_cdna Constitutive 3 NULL GeneID:508836 4 GENE SNX10 MGC139527 sorting nexin 10 EMBV3_27116 CTGTGAAGACAGGACCTATGCAACGCACAGACACTTTTGGAGACCGTGAGACAACAATGC Gene GeneID:540776|EFNA3:NM_001105429:204_cdna Constitutive 0 NULL GeneID:540776 3 GENE EFNA3 MGC151700 ephrin-A3 EMBV3_27165 ACAAGAATTACCAGTCACCCACAACCAGGAGGACCTTTGAGACCATCTTTGAGGAACCCC Gene GeneID:533235|PRR14:NM_001035396:359_cdna Constitutive 0 NULL GeneID:533235 25 GENE PRR14 MGC143265 MGC3121 proline rich 14 EMBV3_34608 ACACTGGGGTCGTCCTTCATCCCCAGAGAGACCAGCGGAGTCGGATGCTCAGCGTCTTCT Variant GeneID:505997|SPNS1:NM_001076808:254_cdna 804^903 1 EMBV3_16685 GeneID:505997 25 GENE SPNS1 MGC140615 spinster spinster homolog 1 (Drosophila) EMBV3_32734 GGAATAGCGGCAGCTTTGAGGATAGCAGCTGACAGCACTCCACATTTACCTAAGGAGAGT Gene GeneID:535940|TNNI3K:NM_001078008:74_cdna Constitutive 0 NULL GeneID:535940 3 GENE TNNI3K MGC152244 TNNI3 interacting kinase EMBV3_33494 CCGGCAGTTCATCACCTCCTGCCCCTGCTGGCTCGAGATCCTTCTCAACAACCACAGATA Gene GeneID:511279|SMAD6:XM_002690476:397_cdna Constitutive 0 NULL GeneID:511279 10 GENE SMAD6 NULL SMAD family member 6 EMBV3_15596 TCTGCTGTATTCATTTCTCCAATCTCTTGTCCACCTTGATGTGGGAGTGGGAGGTGAGGG Gene GeneID:524770|ACTN1:NM_001035351:127_cdna Constitutive 0 NULL GeneID:524770 10 GENE ACTN1 MGC128689 actinin, alpha 1 EMBV3_21807 TTTTCTGTTCTTGGGAGCCCAGACTGTTCGGCTCGGGGCAGGTGTAGTAGCTTGAAAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00523 AGCAGTCAAGCTATGGGAGACCTTAACATGGTGGCAATTCACATGGGGTTTGGGACTGTC Gene GeneID:505868|PDXDC1:NM_001101859:326_cdna UTR3_Alt 2 NULL GeneID:505868 25 GENE PDXDC1 MGC179380 pyridoxal-dependent decarboxylase domain containing 1 EMBV3_01211 ACCTCCTCCAGTGCTTCGGCGAGCAGACGAGGCTGCGGGGGGATGGCGCCCGCCAATGTG Variant GeneID:520979|AIMP2:NM_001075813:215_cdna 596^942 2 EMBV3_35902 GeneID:520979 25 GENE AIMP2 JTV1 MGC152188 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 EMBV3_36017 GAGGGTTCATGGAAGGGCTTACTTCTGGTGGCCTTGCTCAAATTAAGAATGACCTCATGC Gene BVV0102_298213 - 1 EMBV3_19027 GK000023.2:31281324-31288208 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134891 1 XLOC_081574 Coding TCONS_00134891 XLOC_081574 Coding Coding - 23:31282475-31288342 - TSS100469 5867 3 TCONS_00134891_2 166 0.313788989261974 1 0 0 0 0 0 0 0 0 0 3.36314333042548e-06 0.00011921917457586 4.96216336206142e-05 6.54148237553805e-05 1.22624217520838e-06 4.99478647199418e-05 4.11551895233419e-06 0.000871222508210033 5.37653571734356e-05 0.000105769287792081 0 0 0 0.000286141601870774 0.000270514272342282 0.000537764635024381 0 0 0 0.000104746437906136 7.83440205802388e-05 4.61955881836646e-05 XR_229807.1 LOC101907467 PREDICTED: Bos taurus uncharacterized LOC101907467 (LOC101907467), 0.0 675 72.13 0.214419635247997 XM_005248444.1 TMEM161B PREDICTED: Homo sapiens transmembrane protein 161B (TMEM161B), 2e-07 64.4 66.27 0.0420998806885972 TCONS_00134891_8 sp|P10400|POL1_MOUSE POL1_MOUSE Retrovirus-related Pol polyprotein; 3e-11 58.2 41.56 0.5703125 1 noncoding GTCATTGGAAAAATGAATGCCCCAGAATAGCTGGGAAAAATAACTGGCATTGGCTGTTTTCGGGCTGGCTGAACTGGAAGCTGAATAGGGGTGCCGGGGCTCAAAGACACAAGGTCCCCAAGAGCCCATGGTAAAACTAAAAGTGGAGGACCAAATTATTGACTTTATGGTGAATACTGGAGCAGAAATGTCAGTGGTGACTGAACAGGTGGCTCCCCAGAGAAGGTCACTGCTGTAGGAGTAACCAGGGAAAAGCTGACTAACCATTCTGTCTACCCCAAAAATGCCAGATTGGGGTGGGGGGCATCAAGTGACTTATGAATTCTTGTATATTCCTGAATGCCCAGTACCTCTGTTGTAGAGAGACTTGTTGTCTAAGTTGGGGCCACAAGTGACCTTTCCCCCCAAGAAAGACCCACTCTCCAGTGGGCTCGACCACCTATTTACTCTCCCTCTCGGTAACCCCTCAAGATGAATGGAGGTTGCATGATCTTTCAGAAGGGAAACCTGATGGGTTAAACAATCGAGAGAGAGCGAGAGCTAATCCAACAATTCCCTGAGGTTTGGGCGAAAGATATCCACCCTCCCCCTCCCCTCCCCCCTGCCCCCGCCCGGGCTCGCCAAACATTAAGCTCCAGTGGTAAGAGAACTCAAACCTGGTGCCATACCAGTCAGGAAATGTCAGTACCAGTTACCGCTGGAGGCACGAATTGGTATCTTTCCACATATAAATACGCTACAGCAGGTGGGCATCATGATTGAATGCCAGTCAGCCTGGAACACACTGATCTTGCCAGTTAAGAAGGAAGGGGGACAGGACTACAGGCCTGTACAGGACCTCACACAGGTCAACCAAACAGCGATAACTCTACACTCCACTGTTGCTAACCCATATACCTTACTCAGTCTCCTCCCACCGAGTGCTAAGACCTATACTTGCCTGTATCTAAAATACACATTCTTTTGTATCCACATTGCTCCGGTACCTGAACCCACTTTTGTCTTTGAATGGGAAGATCCAGCAGGGAGCACCAAACAACAGCTCACTTGGACTTGCCTCCCACAAGGATTTAAGAATTCCTCGATCATTTTTGGGGAAGCCTTGGCTTCTGATCTGGATTCATTCCAGCCAGGAAGGTTTAGATACTGGTTGCTACAATACATGGATGATCTGCTGTTGGCTGCAGAGAATAAAGAACACTGCTGGGAAGGAACTAAGGCTTTGCTAGAACCATTGATGGAGACGGGCTACTGAGTTTCGAGGAAAAAGGCACAGATCTACAAGGAGGAGGTAAGATATTTGGGGTTTGTCCTGAGATGGAGCAAAAGACTGTTGGACCAATCCAGAAACGAAGTAATCTTGAGAATCCCATGACCAAAAACCTGACGATAGGTCTGAGAATTTGGGGGAGCCACTGGGTTCTGTAGAATTTGGATCCCAGGATACTCTCAGATGGACCAACCGTTATATGAACTCCTAACAGGGCCAGAAGGGAATTCACGAAATTGGACTGAGAGGCAGCAACAGGCCTTTGAAAAGCTAAAATTGGCAATTACATCGGCACCTGCATTGGGTCTGCCAGAACTTACTAAACCATTCACTCTTTATGTGACTGAAAAAGACAAAGTGGCTATGGGGGTATTAACCCAGGCTATGGGGACGTGGGATAGACCAATGGCCTATCTCTCAAAACGGCTGTACAACATTGCCACCGGGTGGCCCGGGTGCTTTCGAGTGATTGCCGTGGTTGCCTTACTGGTCCGAGAAGCATCCAAGCTAACTTTGGGCCAAAACTTAATTGTAAAGGTCCACCATGAGGTCAATGCTCTCCTATGAGGAGACCCCACAAATGGTTGTCAACGTAGCAGATTACCCAATATCAGGGACTTTTATGTGAGAACCCCCATGTTACTATTGAGCTCTGTCAGACCTTAAATCTGGCTACATTCCTTCCTATGGGGGAAGGCGGACCCTCACATAATTGTGAAGAAATCCTGGAAGAAGTTTATGCTAGCAGACCTGACCTGAGAGACTAGCCAATCCTGGACTCACATTGGGTCCTGTACACTGATGGCACCAGCCTGGTGAAACAAGGACAATGGCTATCGGGGTATGTGGTAGTCACAGAAAAGAGCATCGTCGAGACTGGTTCTCTGCTATCTCACTGGTCTGCTCAACGGACTGAATTATGGGCTCTCATTCGGGCCCTCCAGTTGTCAAAAGGTAAGAAGACCAACGTTTACACTGACTCCAGGTATGCTTTTGCTACTTTGCAATATACATGGGGCCCTATACAAGGAGAAAGGGCTCTTAACAGCTAACAGTAAAGACATCAAAAACAAGGAAGAGATCTTGACCCTACTAGATGCTGTATGGGAACCTGAAAAAGTAGCAATAATATATTGCTGGGCTCACCAAAAAGAGGGCACCCTGCAGGCGGGGGGAAATCGACAGGCAGATGGAGCCACAAAATAAGCCGCTGAAGAATTTGGAGTCACTGGGGTGGGATTGTTAAGGCTTTTGTGCTCTTGAGAATGCCCAAGTTAACTTCAACTGTCCCACAGTATACCCCGGCCCAAGACCAGCTGGCTGAGATAGAAAGGGCCACCAAGAATGAAAAGGGCTGATGGGAACTGCTGGATGGCAGGTTGCTAGTTCCTGAAATATTGGCCTCTTCATTAGTGTCTCAGTACCCTAGGCTACTCACTTGGGATGTGACAAAATGGAAGAATTAATTTGGAAATATTTTTTAATACCACGGCTTTCTTCCTTGTGTAAAATGGAATCCCAGAACTGTTCTGCTTGCTCAGAGGTCAATGCTACCCCCGGACATAAGCAGAAATCTCTGGGAATACAATTAAAGGGTACTCTGCCCTTTGAACATTTAGAAGTGGACTTAACTTAAATGAAACCCTACTGGTATTATCATTATTTACAAGTCGTGGTACGTACCTTTTCAGGTTGGGTGGAGGCATTCCCCACCTGAACTGAAAAAGCAAATGAAGTGGCTCATTGTCTGATTCAAGAAATAATCCCCAGATTTGGGTTCTCAACCAGTATAGGCTCAGACAATGGTCTTGCTTTTGTAGCCAATTTAATTCAACAACTATGTAAACCTCTAAATGTCAAATGGAAATTACATACAGCATATAGACCCCAGAGTTCCAGAATGGTGGAAAGAACTAACCAAACCCTAAAAGATACACTTTCAAAATGGATCATAAAGACTGAGGGTTCATGGATGGACTTACTTCTGGTGGCCTTGCTCAAATTAAGAATGACCTCATGTTCCCATGGTTATTCTCCTTATGAAACTGTCTATGGAAGACCCCCTCCCATAGTAAGACAGGTGTTGGCAAATTTGCCATGTAAGAGGGGGATGGGATTTCACAGAGGATGGAAAAATGAGGTAAAGTGATAAACCAGGTAACTAAGTTTGTCCAAGAATGGATGTCATTCCCCCTTGGGGAGCAGATTCATGAATTTGTGCCCGGTGATCAAGTGTGGGTCAAGGACTGGAAGCATGACTCCTTGGCCCCACATTGGAAAGATCCATATACTGTTGTACTAACTACACCTAAGGCAGTTAAAGTTGCAGGTGTCACTCCCTGGATCCATCACACGAGGGTGAAGAGGACATACCACACAGACCTGGAGGATGCCGAGTGGACTATACAAAAGGACCTCGCTGATCTCCGTGAAACCAAGATCATCTTAAAAAGAAAAAATGAAGCTCCGCAATCAACTCCTACTACACGGACTTTCTGGTATCCTGGGACTAACCCTAATTTCAGCATAAGACAACATTTTCATCTCATGGGCACATTCCTATGCTGACTTCCACAATAGATCTAACTGCTGGGTATGTGGAGCTATGCCCATGTCCATCATGGATGGACTCCCATGGTGGGTGTCACCTCTACGAAGGGGTGACATGCCTAGTTTATGTGACTATTTTCTTCAGATGAAACAACAAAAGTCGAATGTGGAAACTGTCATTACAGCAGCCACTACCCATTGGTTTGATAAAAAGGCTGATGATCTGACAAAAGGCCACAGGATACATTTTAATTGTATTCTTAGCTCAGAAAATGCTTATCAATATTATGTGATAGCCAATGCCCAAACAATTAAAAAAAAAACAGGTATTTTGACCAATTTTACCAGATATGAAATGAATCTATGTAGATTACTCCAGAAAAGGGACAACTTGTTATGATAGCTGACATTTGCTGGGAACAGGCTGTACACACTACTGGATATAATAACCAGACAATAGACAAAAAGGACTTGAAGCCAATGGGCTTTCTACGGACAGAACAGTGTTATAAGACCTATAAAATTACTTATGATCCAAATCAATCCACCCAATGGCCTGGGACGGACTAGGGAGTCAACCCCGGAATCAGGTGGATTGCTCCAAACAGCACTCATTGGTTATGCAGGACCAATCTGTGGCCATGGGTACCTAAGTGTGGGTAGGAAGATGTACTTTAGGTCTGGCCTTTGCCCATGGGAACATTAGGCCAACAATACAGGACCCCATAAATGTACCCTCCCTACGGGCCAGATGGTCACGATCAGTTTTCCATTGGTATGATTATTTGACTGCTACATTTGTTCCTTCGTTGGGCACTACAGGTACAATGATTAGAGTTGAAGCCCTAACTAATTTCACCCAAAGGGCCCTAAATGACAGCCTGAGGGCAATTCAAGCATTAAATACTGAACAAATACAAATGAGAAAGGCAGTAATTCAAAATAGAATGGCTTTGGACATCTTGACCGCTGCTCAAGGAGAGACTTGTGCCATAATAAAGGTTGAGTGGTGTGTGTATATCCCAGTCTTGTCTGGAAACGTTACTGAAGCTCTCAGAGATACACAAGCTCATGTAAAACAAATGTCAGATGACTCAGTACCTTTTCTGTTTTTTCATGGATAAAGGGGGATTGGCGAACTGTCAATTGTTGTTACAGTTGCTCTGTTAATTTTGTTATGTGGACCTTGTATTCTCCAGTATATTGTCCAATTTGTGTCGCTGATATTGACTACATTTACCCAAGTACATGCCAAAAGACCTAATGTGCAATATGTCCCTATAAGTGATATTCACGTTAGAAGCTAAGAGCATCAAGAGAGGGGAATGAAAGACTAAAGGAGCAGGTTGCCTTGACTGGACTGACTTCATTTTTAAAAGAAAAGGAACTCCATCTTACACTCTCAGCAAACTTTTGGACTGTATATCTGGGAGGCCATGGAGATAAAATACCAGCGGCTGAACAGGTCTCCGGGATGGATAAAAACCAGACCAGGCAGACCCTGTACCTAGACCTCCCGGAGCCAGAAGGAATGCAATGCCCACTATGTAATCAATCACTATCTTCTGAAATCTTAATAATACCTATTGATGTGGGGTAAACTGTATGTCCAGATAGCTTTAGAATGTGAATTTATGGCTAAAACCTGATTATCTCTTACTAACATTGTCCAGAGTGGGTTTTAAAGAATTTGCAGATGTGGGCTTGGGCACATACACCTTGGGCATAAAAGGTTGTCACAAAAATTGGTTGGTAACCCTGGCTAAAGAGGAAACTCTGCCTCAGACCCGCTGGTATAATAAACTGCACTCCACTCCTTCATGCTGTCCTTCTGAGTGAGTTTGCTTTCTGGAGTGTTTGGCTACAACAGAGGGAAAATTAGTTTGTGATCTAACAGCCAATCTGTTGTTGGGGAGGGGGAAATTTCCCCTTCTCCTCTTGAGTACCTGTGGTTGCAAGATGTTAACAGGAGAAAAAGAAAGAAATTTTAATTCATGAACATGGAGGTCCCATGGAAATGGGACCTAAGAAGTGGCCAAATCAGGCA TCONS_00134887 TCONS_00134888 s 5' 1101 TCONS_00134887 TCONS_00134888 s 5' 6967 EMBV3_33990 ATGACCGACACAAAGGGAACAAGGAGGGGCACCTGCAATATGTCCTCTAGGTCTTTTAGA Gene GeneID:616127|LOC616127:XM_002690803:17_cdna Constitutive 0 NULL GeneID:616127 10 GENE LOC616127 NULL similar to 60S ribosomal protein L21 EMBV3_25321 CAGCTACTCTTCGAGGAAGGACTGTCAAATGGCCCTGAAGCGAGTGGACTATGCTCGCCT Gene GeneID:511672|MED11:NM_001038084:78_cdna Constitutive 0 NULL GeneID:511672 19 GENE MED11 MGC133519 mediator complex subunit 11 EMBV3_00153 GCCAAGGAACGACAACTGGATGAAGCCGTGGGAAACATGGCTAGAAAACAACTGCTAGAC Gene GeneID:281611|AKAP4:NM_174235:24_cdna Constitutive 0 NULL GeneID:281611 X GENE AKAP4 NULL A kinase (PRKA) anchor protein 4 EMBV3_26833 TTCATGTTGGGGGGAGGGTCTTTTATTTTGGCGGGGGGGTGGGGTAGACTTTTTAGTGTA Gene GeneID:614453|EFNA2:NM_001105000:92_cdna Constitutive 0 NULL GeneID:614453 7 GENE EFNA2 MGC155062 ephrin-A2 EMBV3_20720 ACTCCTGGGAGAGCCAAGAGGCCACACACATGGCACAGCGGGCACGACGACCTACTGCTT Gene BVV0102_201443 + 0 NULL GK000009.2:105066197-105073005 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18167 TGAAAAGAGGTGAAGAAATTGCCTCCTCAGGTAACAACATCCATTTTATACACCATGATA Variant GeneID:616897|C8H9orf21:NM_001076436:11_cdna 473^604 1 EMBV3_29014 GeneID:616897 8 GENE C8H9orf21 C9orf21 MGC140765 chromosome 9 open reading frame 21 ortholog EMBV3_05645 GAAACAGACAAAGGAAGAAACAAGGTGGGAAGAGGGCAGATAAGGGCTGAGGTTGAGACC Gene BVT0102_121572 + 0 NULL GK000019.2:43947910-44035969 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09729 AGTCGCTCAGATTCCAGTTACCGTATGTCTGCTACTGAGATCCTGAAGAGTCCCATCCTG Gene GeneID:539895|NHS:XM_002700372:18_cdna Constitutive 0 NULL GeneID:539895 X GENE NHS NULL Nance-Horan syndrome (congenital cataracts and dental anomalies) EMBV3_31986 CCAGTCCTTTCCCTGGATTCCCCGAATTGAGAACCAGAAGCTGGTTAAGGCTGTATTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31811 ATGAAACGAATGGAACAGTGTGTAGAGAAGACCCACATCCCCGACACAGTCAATGGGAGC Gene GeneID:282858|RAB27B:NM_174738:29_cdna Constitutive 0 NULL GeneID:282858 24 GENE RAB27B NULL RAB27B, member RAS oncogene family EMBV3_14303 TGAGGGGACAGACATAGGCGTCAATCTCCATCTGCCCAAACCTAGGCTCTTTGCCTATTT Gene GeneID:785203|LOC785203:XM_002690115:126_cdna Constitutive 0 NULL GeneID:785203 9 GENE LOC785203 NULL hypothetical LOC785203 EMBV3_42758 CGTTGATTCTGTGCTCCTCGCCTGGTTCCTGTTGGATCACCGTTTGGAACACGTAGGAAT Gene GeneID:100336654|LOC100336654:XM_002683966:1_cdna Constitutive 1 NULL GeneID:100336654 Un GENE LOC100336654 NULL mannosidase, alpha, class 1B, member 1-like EMBV3_16246 TTCTCCAGCGAGGTTCACTCAAGTTTCACTTTCACTGGTGCCTTGTGCGTTTACTTGTAG Gene GeneID:514234|LOC514234:XM_002698783:135_cdna Constitutive 0 NULL GeneID:514234 28 GENE LOC514234 NULL hypothetical LOC514234 EMBV3_33736 ACATGATGCCCTGACTAGGAATACTTGTGAAGTGTGTCTTCCGATCACTGGCCCACTAGG Gene GeneID:529062|ANKRD28:XM_002685177:37_cdna UTR3_Alt 2 NULL GeneID:529062 1 GENE ANKRD28 NULL ankyrin repeat domain 28 EMBV3_40482 TCCAGGATGACTACGAAGACGAAAATCTCTATGAGGGCCTGAACCTTGATGACTGCTCCA Gene GeneID:281674|CD79A:NM_174266:41_cdna Constitutive 0 NULL GeneID:281674 18 GENE CD79A MB-1 CD79a molecule, immunoglobulin-associated alpha EMBV3_36862 TCTCTGGTGCCTGAAAAGCCAATTTTACAGCCATCTTCCATCACGGTTTAACTTTGGGCC Gene GeneID:509583|DHX36:NM_001080251:23_cdna Constitutive 0 NULL GeneID:509583 1 GENE DHX36 MGC139804 DEAH (Asp-Glu-Ala-His) box polypeptide 36 EMBV3_43606 TGAGCAGGGATGGGGCCTTTCTCATGGATGCAGGTTCTGTACTAATGCTTTGGGTTGGAA Gene GeneID:505089|SEC24A:NM_001101849:7_cdna UTR3_Alt 2 NULL GeneID:505089 7 GENE SEC24A MGC143173 SEC24 related gene family, member A (S. cerevisiae) EMBV3_38919 GCTGTCCTCGAACATGCATTCTACTTACACCAACGAGGTCAACTCCTGACACCCCTCCTA Gene BVT0102_045520 + 0 NULL GK000015.2:43501790-43509668 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061347 TCONS_00061346 TCONS_00061349 TCONS_00061350 TCONS_00059156 TCONS_00061348 TCONS_00059157 2 XLOC_036957 XLOC_036273 Coding TCONS_00059157 XLOC_036273 NonCoding NonCoding SWAP70 15:43506548-43510896 x TSS44422 2625 3 TCONS_00059157_7 86 0.239619047619048 2 0.396595353117092 0.00118855956168568 0.00404963821715741 0.00295288208170381 0.00233147375505787 0.00237466616828003 0.000659779109509217 0.00166213625479569 0.00333550146663452 0.000655496987097558 0.000264442733154936 0.000568654141787686 0.000119251825688681 0.000560438331311367 0.00155967153163289 0.000685983574304751 1.19387775886323e-39 8.85441810626241e-05 1.03585261200504e-141 0.000464951819605911 0.00273413681503055 5.56377114404913e-31 5.24399552999394e-199 2.4993437568428e-106 1.37852795499141e-27 0.00268509681938821 0.00383527260803463 0.00241636131536968 0.000123614383767721 5.66211886149858e-05 2.40271832732175e-05 XM_005215991.1 SWAP70 PREDICTED: Bos taurus SWAP switching B-cell complex 70kDa subunit (SWAP70), transcript variant X1, mRNA. 5e-35 154 100.00 0.032 NR_033972.1 LOC440028 Homo sapiens uncharacterized LOC440028 (LOC440028), non-coding RNA. 1e-55 223 70.46 0.207619047619048 0 noncoding 0 0 0 0 -0.759764500955234 0.0189710439011305 -0.0133195009273761 0.78812259491436 AAGACCAAAGAGCCCACAGCTGCCTCCAGACTCGGCCCTGCCCACCATCAGGGCAGACACCAGAAGCAGAAAGCTGCAATGCCCCAACTGGGCCCTGGCTGGCCCTGTCTACTAGCAGACCACCGCAACCTTCAGGACACGCCAGGCCCCTTACCCAAGTGAGTCAGGAACTGCTTCCACCCCCCGCAAATGATCTAAAATGAACTCCAGTATCCCTGGCCCTCCAGCCAGACTCCAGGGACCAGCTCTGCCTGCCAGTAACCCCAGGCCCTGGCTTCACCTGCCAGTGGGTGGGCAGCAGCCCCAGAGCCTTTGGGACCCTGACTCTGTCCTTCAGTGAGTCAGCACTAGCCTGGGCCTCCTAGGAAAGAAGGAACAAGACAAAGCCCCAGAAGAACAACTAAGTGAGGGGGAGACAGGCAGAGTTAAGCGACCTCTGGGACATCAGGGGGCACCAGTACTCAGAGTGGCCCCAGGAGGAGAAAGGGCCTGAGAAAATACTTGAAGAGATAATAGCGGAAAACTTCCCGAACCTGGGAAAGGAGTCACCCAAGTCCAGGAAGTGCAGAGAAGCCCACACAGGATGAACTCAAAGAGGAACACCTAAGACACCCTGTAATCAAGAGACCCATCATGGACTGCAGAGTGTTGACTGCGGGCAAGAGGCTGGGGGGACCTGGGACAGGAAATGAGAGATTTAGATGGGGAAGAAGGGCAGGATGCGGGGCTCAGGGCTGACTGGAGTGGGGGCTGCTAGACAAAGCTTCCGTCTCCCACTCATCACGTCCTCCGGCCCTCATCCAGGCCCTGAGGACAGCTGTTGCGGAGGTGGACACAAACAGGGAGAAAGGCCTTCATTCCTGTGGGTGAACGACCCCGAGAATCAGTATGCTGCATCTACGTAGTAGACATGGAAGAGGAATCTGAGGCTAGCCCTGGATGGAATTCAGTGTCCGCCACAGATCTACCCACTCCCCAAGAGCAAAGACTCAGCAACCTCAGAAAGGTCAGTGGAAGCTGGGCACAGGACAAGAAGGGGTCAGGGCCCACTCCTCCAGAGGGGTGATGCAGGGACACGGAACCAGCTGTGTGGTGGGAGACAGAAACACACCACGATAAAACCGTGTGACATCAAATGTATTTAAAGAACCCAGAGGAGGCAGGTGGCGTCATGAACCACATCCTAGAAGACGGTCAGCTGTTCCTGGGTAGATGTGGTTGGTCCCCTTCCAGGTCCTTCTCTGCAAAGGGAGGGCTTTGGACCAGCTGACCCCAGGGACTAGCCAGCCCAGCATTCTAGAGGCACTAGGTACAAAAGAGCAAACTACAAATCTTGAGTATAACGCTGATATATTTTACTTATGTAACCACTACCCATTTCCAGCATCCCAGAAGTTCACTTGTTTTCCAGTCAATAACTTTCCTTTCCACCCCCAGGTAACCACAATTCTGACTTCAAAAACCGCAAATTAGCTCTGCCGGTTCTAGAAATTAATATAAATGGGGTCAAACAGTATTTTCTGTGTTTGGCTTCTTCGTTCAACAAAATGTCTGTGAAATTCATCCACGTTGCTGTGAAATTCATCTCTCAGTAATGCTACTTTTAAATGAAGTATAGGATTCCTGTCTGAACACACCACATCCACAGATCTGTTTCAGCTGATGGGCACTGCGGTTGCTGCTGCTTTGGGTCATCCTGAACGAAGCTGCAGTGAACCCCCTGCAGGGTCTCCTTGTGGACACCTGCCTCATTGCCCTTGGGGGGACCACTGGCCTGCGGGCAGGTGTTGTCTCTAGCATGAGGAGATATCACCATTTTGCTTCCTAAGTTGAGGGGTGACTTTTATGGGTCTCAAAATGAATATAAAAATACAGAAGGAAGTAGAGGGAAGAGCAAGAGGAAAGAAATAGATGGACCTTAAAGTACTCCTAATACTGATTCTTGCAGTCAATGCTGAGGCCCTACTCTGATCTGGTAAAAGCTGGGCCGCGCCTCTTTCCCACTCCCCGTGGCCTGACGTCAACCCATCTCTGCTCTGCCAGGACAGCTGTGACTTGCTGGCACGGCTGTGGAGGCACGATGGAGGCTGTGCCAAGTGGAACAGGCACCGGTGCTCTGCGAGGGACATTACCAGCCGGGCCATAAATCTGCACACTCATTCCTCCCCAGCTGCTGAAATGGTTCCGACAGCCCCTCCCCACACTCAAGGTCATGGCAGCTTTACATTTCCCACCTCAGCAGCCTGGATCCTAGGAAGACTTTAAAGCATATACAAAACAACTCCCCGGGCACGTAAGCGGAAAGGGCCTTTACAGAGCCTCTGAAGCACAACGCCCCACACGGGGCGGCCTCGGCTCCCGCCCTCTGCCCGCTCACCGAGCACCCGGCCGCTGTCCTCGAACATGCATTCTACTTACACCAACGAGGTCAACTCCTGACACCCCTCCTAGGGAAACCCTGACGCCAAGAGCCTGTTCTGTTCTGGACCAGAACGTGCCTTTCTGCAGAGAATGTTTATCAGGCCAGCTCTTCTGTCGTTCCTCAAGTTCTGCCTGGGTGAAAGCTGCCGGGCCCCAGTTAGTGATCAAGTGAGCATTTTTTGAACCTAAGAGACAAACACGCAT TCONS_00061350 TCONS_00061354 r 5' 0 TCONS_00061350 TCONS_00061354 r 5' 0 EMBV3_21689 CTGGTTCCCCTCAGGGAATAGCAGAGAGCAATTGGCCCTCTCTGCTGCTTGTATTTGTTA Gene GeneID:783760|EIF2B5:XM_002684878:87_cdna Constitutive 2 NULL GeneID:783760 1 GENE EIF2B5 NULL eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa EMBV3_38510 CTCAGGATGCCTCTTGTGTTGGCCCAGGGAAGTCCAATCTTCCATTCGAGTTGTGAAGGA Gene BVT0102_046628 + 0 NULL GK000008.2:44632790-44682698 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00178735 TCONS_00073626 TCONS_00240375 TCONS_00033207 TCONS_00178732 TCONS_00149040 TCONS_00218950 TCONS_00206816 TCONS_00149037 TCONS_00098202 TCONS_00117596 TCONS_00162301 TCONS_00230834 TCONS_00088420 TCONS_00158397 TCONS_00206815 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00201119 TCONS_00050935 TCONS_00098198 TCONS_00222139 TCONS_00178730 TCONS_00178729 TCONS_00161424 TCONS_00253351 TCONS_00233533 TCONS_00222179 TCONS_00088422 TCONS_00218954 TCONS_00106013 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00106012 TCONS_00107098 TCONS_00240373 TCONS_00223049 TCONS_00231769 TCONS_00033186 TCONS_00054136 TCONS_00130054 TCONS_00056187 TCONS_00157046 TCONS_00011614 TCONS_00063809 TCONS_00158779 TCONS_00162571 TCONS_00220551 TCONS_00218947 TCONS_00186835 TCONS_00142474 TCONS_00218948 TCONS_00054133 TCONS_00142473 TCONS_00230354 TCONS_00148446 TCONS_00142472 TCONS_00062718 TCONS_00129561 TCONS_00021875 TCONS_00231774 TCONS_00011613 TCONS_00166333 TCONS_00230353 TCONS_00176791 TCONS_00186558 TCONS_00186489 TCONS_00238284 TCONS_00230829 TCONS_00157808 TCONS_00131535 TCONS_00238280 TCONS_00054140 TCONS_00107108 TCONS_00031770 TCONS_00178886 TCONS_00222184 TCONS_00231772 TCONS_00156869 TCONS_00249554 TCONS_00106011 TCONS_00106016 TCONS_00107100 TCONS_00231775 TCONS_00098201 TCONS_00107076 TCONS_00158314 TCONS_00071451 TCONS_00136035 TCONS_00186834 TCONS_00071397 TCONS_00072307 TCONS_00012044 TCONS_00131538 TCONS_00178731 TCONS_00201121 TCONS_00207543 TCONS_00111146 TCONS_00212984 TCONS_00222175 100 XLOC_090921 XLOC_108508 XLOC_045388 XLOC_147039 XLOC_019441 XLOC_108505 XLOC_090917 XLOC_132269 XLOC_125336 XLOC_090914 XLOC_058448 XLOC_071762 XLOC_099183 XLOC_140324 XLOC_053207 XLOC_096851 XLOC_125335 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_122767 XLOC_031050 XLOC_058444 XLOC_135448 XLOC_108503 XLOC_108502 XLOC_098315 XLOC_156291 XLOC_143015 XLOC_135488 XLOC_053209 XLOC_132273 XLOC_062697 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_063009 XLOC_147037 XLOC_136355 XLOC_141257 XLOC_019420 XLOC_031945 XLOC_078765 XLOC_033990 XLOC_095506 XLOC_007165 XLOC_038535 XLOC_097231 XLOC_099452 XLOC_133868 XLOC_132266 XLOC_112886 XLOC_086899 XLOC_132267 XLOC_031942 XLOC_086898 XLOC_139844 XLOC_090326 XLOC_086897 XLOC_037445 XLOC_078274 XLOC_012548 XLOC_141262 XLOC_007164 XLOC_101171 XLOC_139843 XLOC_106565 XLOC_112610 XLOC_112541 XLOC_144951 XLOC_140319 XLOC_096263 XLOC_080240 XLOC_144947 XLOC_031949 XLOC_063019 XLOC_018015 XLOC_108659 XLOC_135493 XLOC_141260 XLOC_095329 XLOC_152497 XLOC_063011 XLOC_141263 XLOC_058447 XLOC_062987 XLOC_096768 XLOC_043222 XLOC_082254 XLOC_112885 XLOC_043168 XLOC_044076 XLOC_007594 XLOC_080243 XLOC_108504 XLOC_122769 XLOC_126058 XLOC_067046 XLOC_130301 XLOC_135484 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_03786 CGTGGAAGGCAGCTGCGATCCCTCGGACCAGCTTATCCTGCTCACTGCCCTCCTGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43392 AGAGAGCTTTGCTTCTGCAGCAGTTACAAGGTAACCTCCGTGGCTACAACCTGGCCACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35020 CAAAATACAAATCTGGAGGTGGCAATTGTAGATACAGGGATACCAGCAGTGGAGCCGCGG Gene BVT0102_132525 + 1 EMBV3_03418 GK000003.2:53419679-53470478 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177596 1 XLOC_107370 NonCoding TCONS_00177596 XLOC_107370 NonCoding NonCoding - 3:53466504-53467002 - TSS132355 498 2 TCONS_00177596_2 52 1 0 0 0 0 0 0 0 1.17102556850661e-05 0 0 0 0 0 0 0 0 0.00010607060000861 0 0 0.000820768569599948 0 0 0 0 0 0 0 0 0 9.74818290655762e-06 0 0 noncoding 0 0 0 0 0.0768018349664641 0.55192427219062 -0.00873696075385597 0.849080010342964 AATGGATAAGGAAGGAAGGCAAAAAAAAAAAAATCAAAATACAAATCTGGAGGTGGCAATTGTAGATACAGGGATACCAGCAGTGGAGCCGCGGGGGAAGGTGGTACCTGCTTTCTTCTTCTTAGATTCTTCCATGTGAAACTGGGTTCTTTCTCTACATGGACCACAGATATCCCATTTCTCTTCTAGCCCAGATAGTGGAGTATAGTGACTAACAGAAGAAATCCAGTAAAACTAAATGTCAGGATGATGCAGGCTGGGTTAGTAACAGCTTGAGAATCTGGGTCTGAAATGCCAGGCTGGACAGGAAAGTCACATCTGCCCAGAGGGCCTGGCACATGTTACTGTTTTTGTGCACCCACCTTTCTGGACCTGTTGAATGTCACTCTCTGCCACGTTTACTCTGCATCACATAGCCCAAACAGAGCTTTCTCATTTCAGAATAAATGACCATGAGTAAAGACAGTCATGCCTTGAACATTTAGTGAAGGTACTAAT TCONS_00169937 . 5' 3476 TCONS_00169937 . 5' 3476 EMBV3_31823 GGAGACAGTCTGCATCAGCTTTTGTATTAACAAAGTTACTGACTCTTTGTGTGTCTCCGG Gene BVV0102_067617 + 0 NULL GK000017.2:10174051-10182662 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01413 ACCTTGCTGAGATTGTATCACGTATTGAGCCTGCCAAGGTGGCTGCAGGGGACGATGAAT Gene GeneID:536255|LOC536255:XR_083806:89_cdna Constitutive 0 NULL GeneID:536255 11 PSEUDO LOC536255 NULL similar to patatin-like phospholipase domain containing 7 EMBV3_22472 AAGACAAAGGTCTTTCCTCATGGTGCTTCTTCAGTCGGAACCCCCAGTCAGCGGCTCCCA Gene BVV0102_398701 + 0 NULL GK000007.2:92746779-92872310 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21075 GAGACTCTGGCCGTGATGATCAGGAGCAGCTGGACAAGATCAACGAAGAGATCCGGTTGA Gene GeneID:100301346|LOC100301346:XM_002692611:56_cdna Constitutive 0 NULL GeneID:100301346 14 GENE LOC100301346 NULL similar to PTPRF interacting protein alpha 1 EMBV3_17410 AAGCAGACAGGCCAGTGGATCGGGATGGTGGAGAACTTCAACCAGGCACTCAAGGAAATT Gene GeneID:615149|BLOC1S1:NM_001076362:64_cdna Constitutive 1 NULL GeneID:615149 5 GENE BLOC1S1 MGC137062 biogenesis of lysosomal organelles complex-1, subunit 1 EMBV3_08361 GTGGGCATCGAAGGCGCCAACAGTATCTTCTCCGGGTTCATGCTCTTCCCTGACACAGAA Gene GeneID:617435|C1QB:NM_001046599:293_cdna Constitutive 0 NULL GeneID:617435 2 GENE C1QB MGC137261 complement component 1, q subcomponent, B chain EMBV3_07564 AGGACTTGGAGACGCAGAGATGTCACACCAGGCCCAGACATTCCTTTCCACGGAGAAATT Gene GeneID:615012|MAN1C1:XM_002685706:385_cdna Constitutive 0 NULL GeneID:615012 2 GENE MAN1C1 NULL mannosidase, alpha, class 1C, member 1 EMBV3_10388 GGCGACTGGAACTTCCGAAGCCCTGAAAATAAAAAGCACAGTCAGTAACTACCTGAAATC Gene GeneID:539135|TOX3:XM_002694777:574_cdna UTR3_Alt 2 NULL GeneID:539135 18 GENE TOX3 NULL TOX high mobility group box family member 3 EMBV3_09298 AGATAATGTGCTTCCAGTCCCATTGTGTTTCAATTGCCTCTGTGCCATTCAGTTGGGGAT Gene BVV0102_366690 + 0 NULL GK000030.2:36172925-36568537 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02340 AGGGATCATAGGACCGGAGCTGGAGAGAGGCTGGGCTTCTAAAGTGTGTGAGAGATGTTT Gene GeneID:783415|LOC783415:XM_002698557:65_cdna Constitutive 0 NULL GeneID:783415 26 GENE LOC783415 NULL similar to Protein FAM24A EMBV3_18770 AGAGAAGGACCTGACTTAACAACGTCTTCGCTGTGGGGCTGTTACTCATTGGTTCCTCAC Gene BVT0101_059104 + 0 NULL GK000016.2:79921801-80751685 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068381 1 XLOC_041670 Coding TCONS_00068381 XLOC_041670 Coding Coding - 16:80079098-80100512 - TSS51204 1808 3 TCONS_00068381_1 83 0.401548672566372 4 0.91575211320226 5.27454720789489e-10 1.8045092678874e-05 0.000139475192193095 2.19201401754627e-10 1.82459540389278e-10 9.89230534283397e-06 1.78165409153186e-10 9.50953190211342e-05 6.1096051784379e-05 1.82057568390274e-05 0.00027728521687388 5.92101161783438e-06 6.84170028623569e-11 5.98313024958988e-05 1.51631525796417e-10 0 0 0 0.000182446097335407 0.000218747275752885 9.05246640013865e-11 0 0 0 0.000126459494456122 6.35225785664042e-05 0.000134267354290496 4.78134354160629e-05 2.68506766628442e-06 3.32536047532146e-06 NM_001105444.1 DUPD1 Bos taurus dual specificity phosphatase and pro isomerase domain containing 1 (DUPD1), mRNA. 2e-43 181 72.25 0.179203539823009 NM_145283.2 NXNL2 Homo sapiens nucleoredoxin-like 2 (NXNL2), transcript variant 2, 5e-08 64.4 74.55 0.0580752212389381 0 coding GCCATCTGCTCCGGCCCGTCAGGTGTTCTCAGCCACGCTGCTCTCAGGCGCAGAATTGCTGCCAGCTGGGCTCCATACCTGAGGAGCTGTGTTGCCCTTTCTCTGTGTCTGGGGCTTATTTTATTGCATTTAAAGCTTTCCTAACAACTCAGAGCTGTCTACAATTACGGCACCGTTTTCTGTTTGTTTTTTTTTATCCTAAATGGGGCATAAGGCTTATATGGGTCTTTGTATTTTCTGGTGAATTCGAGCACAGAGAAGGACCTGACTTAACAACGTCTTAGCTGTGGGGCTGCTACTCATTGGTTCCTCACCTCTACTCTGCCGTCACCTGCCTGGTGGATGAAGGTCACAGGCACATTCCTGCCCCATAGATGCCCTGGATTGAGAAACAAACATCAGAGAGTAGTACATACTTTATGGAGTAAATATTATTATTCCCACATTTTGGATGTGGAAACTGGATTCAGAGCACAGAAGGAGTTTACCATGGCGGCAGAGCTTGGTCATGAGTCATCCATTCTGATCCTGTGTTCTAATCAGCTAAGTTTTGGTGTCCATCATTCAGGGAAGCTGGACACTGACACATGCTGAATTCCGGCCAAATTTATCTGCCAAGATAAAGCTATGATACATTAACATCTCTACTCAACAGGATGTACTTCATGCCATCTGGTCATCCTATGAACACTGATTATAAAACGTGGTCCTGACAAAACTATTATTTGAAAAGATACGCACACCCCAATGTTTCGTAGCAACACTGTTCACAGTAATCAAGATGAGGAAACAACCGAAATGTTTAACAGGCGAATGAATAAAGAGAGCGCAGTCCATTATACAATGAGATGTCACTCAGCCATAAACAAGAAGAAGGTAGTCCTCTTTGCAGCACATGGATGTCACACTAAGTGCATGATTCAGACAAAGACAAATCCCATATGATGTCACTTACATGTGGAACCTAAAACACGACACCGATGAACTCATCTACGTAACAGAAGCAGACTCAGAGAGAACAGATTTGTGGTTGGCAAGGGGGAAGGGGGACAGACTGAGATTACGGATCAGCAGATGCAAACTAGTAAATCCAGAATGGATGCGCACCATGTCCTACTGTGTAGCACTGGGAATTGTGTTCAGTATCTTGTGATAAACCATAAGTGAAAAGCATATGAAAAATAATATATACATGTATAACTGAATTACTTTGCCATACAGCAGAAATGAGCACAATTTCGTAAATCAACTATCCTTAGATTAAAGTTAAATAAAATAAAGTCCTGAAGTTGAATTGAGGCAGTTTGCATGGTGGCAGAGCTGGAGCCGTGTTTCCTGGGTTGGTCTGTTTGCTCTACCATTTTGATTAGCTCTGTGCCTCAGTTTCCTCATCAGAAAAATGGAGAGAAAAACAGTATTACCTACAGTTCTTCAAACACCATCTAGCACATTAGCAAGTACTCCATAAGTATTAATTGTCATTGTTAAAAAGTAGAAAGTTGATCCAAATTACTTTTGTAACTGGAAGACAGACACTGAAGTTCTGTGTGTGTGTGTGCGCTGGTGTGTGTGTGCATACATATGTATTTTATTTTGGCAAATCCATATTTTGCCAATTTTCTTATCATGTTTCTCTCGAGACTAAAAGAACATTTTTTCCATGCACTCTAGATATTTGCACTTCCTGATATGTGAGCTGCTAAGATAAGGTGGTGTTTTACTGTTTAGTTTACCATGTTATGGACTGAATGTCTTTGTTCCCTTAGAAACTGTGTGTTGAAACTCTGCCCTCCAGTGTGGTAGGAGGT TCONS_00070385 r 5' 307235 TCONS_00070385 r 5' 307235 EMBV3_07333 CTGGGGGTCCTGAGGTCCAAGGAGAAGGTGGAGAAGCTCCCTGCTTACCTGGCCACCTCA Variant GeneID:514448|LPIN2:XM_002697792:383_cdna 697^792 1 EMBV3_40445 GeneID:514448 24 GENE LPIN2 NULL lipin 2 EMBV3_43742 CTGAGCAAGAAGACGTGATCAGAGCTTGCTGTGGGATGCTGTGGAAATTCTTTAGGCAAT Gene BVV0102_105375 + 0 NULL GK000023.2:43252338-43436379 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04435 AAGCGAGTGTGTGTCCTGCTGTTGCTGTTGGCTTGGGTTGGTGGACTGTTACATGCTATA Gene GeneID:522410|LOC522410:XM_002692900:123_cdna Constitutive 0 NULL GeneID:522410 15 GENE LOC522410 NULL similar to olfactory receptor MOR231-3 EMBV3_22028 TGCCAGGGTGTCTCACAGCATGTGTGTATGTGACCAGGTGCTAAGTGACCGAATTCGCGT Gene BVT0102_043302 + 0 NULL GK000025.2:39376731-39427355 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149620 1 XLOC_091494 NonCoding TCONS_00149620 XLOC_091494 NonCoding NonCoding - 25:39380386-39381936 - TSS112155 1550 1 TCONS_00149620_2 76 1 0 0.00300202448730238 0.00239218037164152 0.00184482993247459 0.00143313626423192 0.00141744760083648 0.00116081044280639 0.0017344587069022 0.00169427776614824 0.00158820843681603 0.00174932689737806 0.000364792696937975 7.15136718495458e-05 0.00015549666604309 0.000288309731570804 1.89917273802405e-05 0.00248779903686435 0.00318121584447977 0.00417641892330876 0.00252601885223357 0.00379058920489978 0.000967516183770506 0.00163254802164676 0.00109496805204223 0.0016007526484255 0.00268198782488438 0.00314545180108822 0.00197699648399175 0.000991501988242787 0.000341388238635882 0.000907655520104186 NM_024963.4 FBXL18 Homo sapiens F-box and leucine-rich repeat protein 18 (FBXL18), 4e-15 87.8 76.92 0.0696774193548387 0 noncoding 0 0 0 0 1.23784516196705 0.0122879898096113 -0.105434251906923 0.0965406864189112 CCGGTTTTGCTAAATCAATTCCACTTTATTTGAAACTTTTGACATGCCACAAATTTACATGAAAATACCCATTCGAAATGTAAGTTGGAACACAAAATTCAGAAGCAGCTTCACCAAAGGACAAAGAGGTCTGTCATTGAAAGGCAGGTGACGCGAATTCGGTCACTTAGCACCTGGTCACATACACACATGCTGTGAGACACCCTGGCACCCCCCACCCCACCCCCTCACTACCGATCCTGTGCTGAGCGGGACTCTCTGGCCAGAGGGGCAGGCAGTGGTCAGATGGGCAGGTGGGCGGGCGGGCAGTAGTCCGAGTGGCAGCCAGGAACTGGCTGGAGGCAACCAATGGCCGTGGGGTGTCACGTGCCACGGCACCCAGGCAAAAGCACACACCTGCACACAGCCCTCCGCCCACCCCCACCGCTCTCACACCCTCGCTCCCCCGGTGGGCACAGCAGGGCAGCCTCTGGGTACTGCTGGCCTGGAGTCTGGTACAGCTGGTGCCCCAACCCTGTGCTATTAATGCAAGACCTCATACTTCAGAGTTTTTTGAAAAAACTTCAGAAAGTAATTTAGACGACGCTGGTCAGCCTGTGTGGGACCTGGGGTTTGTGAGTTTCTGTGGGTGTTTGCTCATCACGCCCGGCAGACCAGAGACACTGCTCGTCAGAATCCTGTGCCCTGAGCCCCTCCGCACAGGGAGGGGGCCAAGGGCCGAGGCCACGAGGACCACAGGCGTTGGCGTCCACGTCTCCCTCAGTGGGGGCCACACTCCAGTATCCTCACCCACCAATCCCCCTTCTTTTTCCAAGGTCTCAGCACTTTGCAAATCTTAACGGAACAGGGAGGCCGAGAGGAAGCAGAGGGGGACGGGAGGGAGGACCCATCCCGGCAGGCCCCCCGCTGCCAGGCTGGGCGGGTTGGCAGGGTATGCACTGGGACCCGCCACCATCCTGGCCATGCACCAGGAGACCACCAGGGCAATGAGGTTGTGACCGCTGGGTTCAGGCCCTCTGGCCAGCAGAGACCCGGGCACCCCGGCCCCACTTCCCCAGGTCAGGCATCTGCCAAACTTCTGCTCCTGGGGCCCCGGATCCCGCCTCAGGGTGGGGCTGGGCAGGGGGTCAAGGGAGCATCATCTCAAACACCCAGCCTTGCACAGCCACCGGAAGAGGGCACCTCAGCCCCAGGCCCGAGAGGAGAAGCCCTTGGAGACCTGGGAAAGGTACCCTCGGTCCTGTCTTCCCAGGTCCTCGAAAGGCAGCCGACAGGCCTCCGGACCGGGATCGCCTTCGGGCGGGTGGCCGGGCTGCCTGGAGGCACTGACTTAGCAGAACCCAGCCCCAGGAGCAGGCAGGGCCTCTGGGTCTGGGCGGGGCCTCAGGTCTGAGGGCGGGGCACCGGCAGAGGGGCGGCTTCCGGAGGCCAGCTGGGGTCTCTTGTTAACAAAGACACAAACATCCGTCTGGGTCCCCTCCTCCCTCATTCCCCGCTCCCCGCTCCCCGGTGTCTGTCTCGCACACACACGCACACACATCATGCAGACG TCONS_00145604 TCONS_00145603 . 3' 3657 TCONS_00145604 TCONS_00145603 . 3' 5206 EMBV3_20459 TCTTTGTTCTCTCAACAACCTAAAGTAGGAGGTTTATTTCCATAGTCTGATAGTGCCAGG Gene GeneID:783572|ADK:NM_001076066:423_cdna Constitutive 0 NULL GeneID:783572 28 GENE ADK MGC137495 adenosine kinase EMBV3_15962 GTTACAAAACCTTTACACTCCCCAAAACCTGTTTCAACTGGCCCTCCCTTGGTTGCTCGC Gene BVV0102_126593 + 0 NULL GK000019.2:39136078-39171885 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100070 1 XLOC_060313 Coding TCONS_00100070 XLOC_060313 Coding Coding - 19:39143603-39146499 - TSS74446 2896 3 TCONS_00100070_7 113 0.976174033149171 1 0 1.40942872474871e-05 8.03829331478274e-05 2.87589610602436e-05 1.72047178386489e-05 0 0.000116106244854698 5.4370193306447e-05 1.73601963519656e-05 0.000148484956132101 0 0 2.09898480833271e-05 1.89898546069963e-06 0 0 0.000497041551199725 0 1.73279944629267e-05 2.2285314743633e-05 0.000363793211419639 0.000101767176515855 0 9.18671491852643e-05 1.15777958786131e-05 0.000323376576855375 0.000103395145075059 0.000428443018290985 0 0 3.32168774236554e-05 XR_138732.2 LOC100847212 PREDICTED: Bos taurus uncharacterized LOC100847212 (LOC100847212), 0.0 1472 82.51 0.513466850828729 TCONS_00100070_7 sp|Q9UQF0|ENW1_HUMAN ENW1_HUMAN HERV-W_7q21.2 provirus ancestral Env polyprotein; 3e-06 45.8 41.43 0.610619469026549 0 noncoding TGCCCCTTTTACAAACTGGGGACATGGTCTACCTGTCTGATAATCCCCAGGGTGACCTAACCCCAAAGTGGCAGGGACCATTCAAAATCCTCCTCCTCACACCGACTGCAGCTAAACTCAGAAGGTCACCTCTTGGGTACACCTCTTGCCTAAAACAGGTCACCTCCGACCCTGCTCTGCCCTCCTTAACTGACTTATCAGGTCTCCCTCACAGGACCCACATCCTTAAAACTCACCCAGCGACAACCCCTGTCAGCCATCCCAGAGGACACTGAATGACCCGGACACTCCTTAACCTACGACTGTTCCTGACCCAACTACTACAAGACCTCTGGACCAGCACCCCGACTGGAACCTCCTTCGAAGCTCTGACCACCCCGGTGTCTCATCCGTGGCTCCAAGGGACCTTCTACAACCTAAGTCCAGAAGAAATTGATTTCTTTACTCTCATACATGAACACTGTTCCTCCTCAGATTAAGCAACCACCAACTTGGGGCCTTCCGCCCCTCATCCTGACTGGCCTCTCCCCGTCTCTCTAACTATAACTGCACTCTTAATCTTAGTCCTTGCTATAAGCCCAGTAACTGTCTCCCCTCAGGACTGGTCACCTAGCCTTCATCTCTTCGTCGGTATCGCCTACATTGTTAGCTGTGTTCTACTCCTAGGGTGCTATTTCCTCCACACTGCCTAACTAACAGACCCATGACTCCCCCTGTTTTTATCCTTCCTGCACTCCCCTGTCTTCTGGCTAGTCCCTGCCCCTGCTCAGACATCTATTCCTATGTTCATTCCTCATGTTATAATATGGCTCCAAGACCATGAACCTTGGTGGGGCAGAAGTCTAAATCCCTACTCACTGTTAAAGTACAGAAGAGAGGGAATTTCGTGAGCACCTGCCATAAGCTAAATGGAAGAAACATGTTTTTATCCCATTACCCACTGGGGGTACTCAGACAGCAGTCGCTGCTGCTGCTGCTGCTGCTAAGTTGCTTCAGTTGTGTCCAACTCTGTGAGACCCCATAGATGGCAGCCCACCAGGCTACCCCGTCCCTGGGATTCTGCAGGCAAGAACCCTGGAGTGGGGTGCCATTGCCTTCTCCGATGGGAGTGGGGTACTAGATTAATATCGGGAAAAGAAACAAGAACAAGTCATAAAGAACATAATTTCCCGGTTACAGGCTACCCCTGAGCCTTATAAATGCCTAGAGCTCCTTTCCCAATTACGGCATCTCCTAAAACCTCCCTCTGACAACCAACACCTTACCCGCCTTCTCAACTCTTCCTTCCAATTCTTCCAGTACACACAACACACATCCCAGTGTTGGGTATGCATGTCACTGTCTCCCTCACCGCACATAGCAGTTCCCTTACCCTCAACCTGGCTGTCACAGGGCGACTATACCTCCCTCCCCAACAAAAAACTACACAACTCACTGGGCCAGTCTCTGACAATGTCCTACTCTCAGCCTCTTCAAACCTAACCTGTATTAACTACTCTAGTCCCAACTACACTGGTCTTACAAACTCCGCTCCCTCCTCCTGTTCCACTTGGGTTCTCTGGAACAGCACAAATAATCGCACCAACCCGGGAATCTTCATTCTCTGTGGGACCTACGCATATTCATGTCTCCCCGTTGACCCCCTTGGACCTTCATCTTGGTCTTCCTGACCCCAGGTCTAACATTCCTCAAAGAAGAGATAGAACAAATAGTCTACCCCCAAGGGGAACTTTCCCACAGAAAAAAACGAGCTGTCATAGCCCGCCTCCTGACTGGGACAGGCATAGCAGCAGCCCTAGGCACCAGGAGCGGGGGCATCTCGACCTTGGCCCATTTCTACTACAAGCTGCCCCAAGAACTTAATGAGGATATGGAGCAGGTAGTGGAGTCCTTCGTTTTGGTCCAAAGACAAATTAACTCATTAGCTTCTGTGGCCCTACAAAATGGGCGAGCCCTGGACCTTCTCACCACGGAAAAGGGAGGGGCCTGCCTTTTCCTAGGAGAGGACTGCTGCTCTTTGTTAATGAAACGGGCATAGTCCAGGGCAGAGGCAAAGAACTTAGGGACAGAATTGAACGCCCGCAGAAAAGAGTTACAAAACCTTTACACTCCCCAAAACCTGTTCCAACTGGCCCTCCCTTGGTTGCTCCCTTTCTTGGGACCATTGGTACTTATCATTTTATTCCTCTTATTAGGACCCTGTCTCTTCAATCTCTTCCCAAGGTTTCTCCAAGAATGAATTTGGGTCATCTCTCGAGACCAGGTCAAGATCATTCTTCTTAAGAACCTCACCCCGACCTCAGGAAAAGGAGACCCTGGGCCTTAGGACGATCCTCCGTTCCAGACCCAGAACCATCGTCCCTATCCAGCAGGAAGTAGCCAGAGAGATACAGCGCCCTTTTCCCCATTTCTTATGATTTCAGGGTCTGGAATGAAGGAGTGCTTGGGCCTAGAAAAGAAAACAACAGTCTCAAAGGTCCTTGCTGAATTATCTAACTGCGGGGGAAAACAAAACCGAACTTTTAAGTCCCACCCTGGTGCTCCGGGCTGGTTGCATCTACCTGGGACTTATCACCCCCTGCCCAGAAACCTCCCACCCCCTGTTCAACTACAAATGCCATCTCAACTAAAGATTACCCAAAACGTCCCACCTGATAATGTTTCCCTTATCGCTTCCACAAACCTCCCATTAAATATGAAGCCTCCCTGATCCCTCTTGTGCTCAGCCTGGTCGTTAGGCCGACTGTCACCCCTCCTTGGCTGAATAAAGGTAACCTACCTCCTTTGAGGTTGTCTCTCCTTTTCTGCCTCGGCCCAAACTGTACCTTACAGCATCCTTTTAACGTTTTTCATGTACTGAGATCCTTCTCTTCCAGTCCCGGCTTCCTCCACCTCC TCONS_00096754 . 5' 7405 TCONS_00096754 . 5' 7405 EMBV3_02649 CCTGGACTGGCTCATGTGGTTCGCGGCTTTCCAGACCTACGAGCACAACGAGTGGATCAT Gene GeneID:505124|LMF1:NM_001075190:63_cdna Constitutive 0 NULL GeneID:505124 25 GENE LMF1 MGC142455 TMEM112 lipase maturation factor 1 EMBV3_41018 TCCATCTCCAAACAAAGCCCCTTCAAGGACACGGAGGGCACAGAGAGGCCTTCCTAAACA Gene GeneID:513458|NEIL1:XM_002696674:308_cdna Constitutive 0 NULL GeneID:513458 21 GENE NEIL1 NULL nei endonuclease VIII-like 1 (E. coli) EMBV3_29626 GCTTCTCACTTGGGTTGGAGAGTGGGCACTTGCAGGTTTCAGGATCTGGAAGAGATAGGA Gene BVV0102_212260 + 0 NULL GK000016.2:72491703-72529268 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06057 CAAGCTTCTGGACACCTGCCATCAGGCCATGAGGACGCACTTCTTCCACATATCCAAGAT Gene GeneID:512112|AGPAT2:NM_001080264:76_cdna Constitutive 0 NULL GeneID:512112 11 GENE AGPAT2 MGC138073 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) EMBV3_42137 TGGAGAAGGGTGAAGAATGGATCTGCACGGGCCAATAAAAAGTCCTCCATCCACTTCCAG Gene BVT0102_272654 + 0 NULL GK000021.2:56591236-56629745 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119827 1 XLOC_072976 NonCoding TCONS_00119827 XLOC_072976 NonCoding NonCoding - 21:56615789-56620559 - TSS89626 1273 1 TCONS_00119827_2 175 0.332285938727416 2 0.73348710421472 2.13757886309462e-05 0 7.26943574715713e-05 0 0 2.52894960847972e-05 0 1.3938836814049e-05 0 0 0 0 0 3.6952044180643e-06 0 0 0 0 0.00016899288857974 0.000180774495558928 2.38470588824809e-06 2.91464804644097e-05 0 2.63387737699701e-06 0 0 0.00074562665967153 0 0 0 0 noncoding CCCATTCTGGCCCCAGCTCCCTGCCTTTCTCTGCGACCACAGGCTTGGCGCCGGCCGGGAAGAACCGCGGTCGGTCGCGCAGACCCGTCCTGGAGGCTCAGCTCTCTCCCGCCCTCGCTACTATCCTGCCCCGGGGGACAGACTCCCGAGCGGCCAGCGAGGGGCTCACCCACCCTGGCCCGGCTGTAAAAGCTCAAGGGTCCTTCTCCAGCCACATCAGGAATCCCTAGTCTCTCGTAGGTTTTTGGTCTTGGCACTGGCGTTTTCCGGTGTCAAGCCCAAGGAGCATGCAGCAGGGACTTAGAAATGGCAGCTGATGGAAAGCATGGAAGAGCTGGTTGTCTCAGGCTGGAAGTGGATGGAGGACTTTTTATTGGCCCGTGCATATCCATTCTTCACCCTTCTCCATCCTACTCTACTGATTATATCACAGGGTTCCCTCACTCTCTGGCTTCTCTGTTGGGTTGGGCAAGCGGAAGCACTCACTGGGGTCAGAGGGTCGCCGGAGACTGGGATCAGGGGAGTTGGGGGCACTTTAGACTGGCCGCCCCCCCTTTACTGCACTCATCAGCTCCTGTTGGAGTCTCTCTCCTGTGCTGTTCACCCCCTTCCTCCTGCAGGTCTGGGGACAGTAACAGCTCCCCAGAGATGCTAGTCCTGGGGTGCTGCACCATCCTGCATTGTTCCCTTAATCCTCCCCAATCCCTTGAAAACCATCCCTGGGTCACCCTCTCCCCAGTCACCCCGCCAGAGTGGCCTCTTCTTTCTGCCAAGACCCTGGCTGGTACAGATGCAGGTATTTCTAGATGTATCCTCATGGTGAGCTCATGCTAATGGAAGGATGTGTGCCTATTTAGGAATGTGTATAGACTATTTACCTTAAAAAAAAAAAAAAAAACTATACCATTTTTCCAGTTCCTTCTTCCAATTAGCACAGCTGGCCAGCCTCAGAGGAAATCTCTCTTTATCCCCCAAACGACGGGATTGAGTCCCTAACTTCCTCACTTGGCTCCGACACCGGCTCATCTCCGCCCAGGCCTCCTCTTGCAGACTCCCTTGCCCTGTGCTTCCTGTTGCTGGGAGCTTCCTAGCTCCTCCTTAAGGTGGGCAACTTCACTGCGGAATCCAGCAACTCCCAGGACGGTTTCAGGCAACAAGGGGCTGGTTTTTCTGAAAATGATCTTTCCTGGCAGCAACCACACGCCAGCAGGCTTGGACCTGAGTTGATTAATCAGTCGACCAGCCTGATTAATGGAACACTGTTGCTTCTGCT TCONS_00121640 TCONS_00121641 r 3' 9155 TCONS_00121640 TCONS_00121641 r 3' 13924 EMBV3_21679 CTCACTCTTGTTAGAATAGCGTGTTCCTGTCCTTTCACACTGGGTTGGAGGTGTGTCCCC Gene GeneID:520603|LOC520603:XM_002697538:296_cdna Constitutive 0 NULL GeneID:520603 23 GENE LOC520603 NULL similar to KIAA0319 EMBV3_03956 CAACTGCCTGGAGAACCTCGGAGACCAGCTATACGAGGAATGTCAATTGACCAGGCTCTG Variant GeneID:614639|MRPL22:NM_001035454:26_cdna 218^283 2 EMBV3_40508 GeneID:614639 7 GENE MRPL22 MGC127975 mitochondrial ribosomal protein L22 EMBV3_33027 GCTCAGGTTCTGATGATGGTGAAGGCTATGAAGAGCCAGTGGAGAAAGAGATCCATTCGG Gene BVV0102_138939 + 0 NULL GK000008.2:53029579-53347352 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227660 TCONS_00227664 TCONS_00227661 TCONS_00227658 TCONS_00227657 TCONS_00227659 1 XLOC_138291 Coding TCONS_00227664 XLOC_138291 Coding Coding PRUNE2 8:52972773-53096308 j TSS169912 8479 1 TCONS_00227664_14 2807 12 0.931460164812926 0.0012904954967165 0.000493412544040713 0.000840120957507428 0.000854251467707366 0.000710177122537265 0.000275420673974878 0.000360341179842354 1.35826868362257e-14 5.38512886194593e-05 0.000302340098690453 5.77078562766685e-06 9.82204538504533e-05 4.78305028649576e-12 3.93254123966418e-34 1.53988796186382e-05 1.80303581380573e-05 0.00427983317479648 0.00442751519153608 0.00171201206616694 0.00195212044386325 0.000520713321406453 1.55666835219177e-38 5.05314648776953e-28 1.28671008056107e-18 0.00152973959715471 0.000954183023646963 0.000999942981034902 3.92613564812657e-41 6.08403354972364e-06 1.97778429771903e-19 XM_005210046.1 PRUNE2 PREDICTED: Bos taurus prune homolog 2 (Drosophila) (PRUNE2), 0.0 1.511e+04 100.00 0.987970279514094 XM_005251750.1 PRUNE2 PREDICTED: Homo sapiens prune homolog 2 (Drosophila) (PRUNE2), 0.0 8249 81.78 0.987970279514094 TCONS_00227664_14 sp|Q8WUY3|PRUN2_HUMAN PRUN2_HUMAN Protein prune homolog 2; 0.0 3899 72.31 0.998574991093694 0 coding 1 1 1 1 -0.0530837065552098 0.662657768467786 -0.0166268360925988 0.761319908211977 AGAGAGGAGAAGGGTCAGGCCCTGGTCTGTGCCAAATTCCCGGTTCCGCTGCGTCCCATGGGATCAAGGATATACTTCGCGCAGATTAGAAGAGACACCAGGAACTGTACATTTCACAGCAATATCACCAGTGATTTGAAAGCATTCACAGAAAAGTTTGGTTTTGATGTCCTCATCCTCCTGGCCAGTTACCTGTCAGAGGAGCAGCAGTCCAGACAACAGATCGCTGTGTATTCTGAGAACCTAGAGCTGTGCAGTCAGATCTGCTGTGAACTGGAAGAGTGCCAGAACCCTTGCCTGGAGCTGGAACCCTTTGAGTGTGGCTGTGATGAGATCCTGGTGTACCAGCAGGAGAACCCTTCAGTGACTTGTGATCAGGTGGTTCTCCTTGTCAAGGAAGTCATCAACAGGAGGTGTCCGGAGATGGCCTCCAACAGCCGGACATCCTCCACAGAAGCGGTGGCAGGCAGTGCCCCCCTCTCCCAGGGATCTTCAGGGATTATGGAGTTGTATGGTTCTGATGTAGAGCCACAGCCCAGCTCCGTGAATTTCTTGGAAAATCCTCCTGATCTCGGCGATTCTAACCAGGCCCAGGTGGATGTCAATGCGGACCTGGTGAGCCCAGACAGTGGGCTGGCCACCATCAGGAGCAGCCGCTCATCCAAGGAGAGCTCCGTGTTCCTCAGTGACGACAGCCCTGTGGGAGAAGGGGCGGGGCCTCACCACAGCCTCCTCCCAGGGTTTGACTCCTACAGTCCCATCCCCGAAGGAGCAGTAGCGGAGGAGCATGCCCGCTCTGGAGAACATGGTCAATCATTCGACCTTTTCAACTTTGACCCAGCACCCAGGGTTTCTGGGCAGTCTCAACCATCCTCCCGTTCTGCAGACTACTCCCCAACAGATGACTTCTTCCCCAACAGCGATTCCTCAGAAGGACAGCTCACCATGGGGTCTAAAGAACTTGACAGGAGGGGGATGGACATGCCTAATTATTCATCCAGTTCTCTCTTGTCAGGGGCTGGCAAAGAGAGCCTCGTGGAATTTGATGAGGAGTTTGTCCAGAGACAAGAAAGTCCCGGGGATAATTCTGAAAGAAATTTGAGCCTGACAGGTTTTATGCAAGATGAATCTCCTTCTCCAGAAAGTCTAAAAACTGTTGGAAAGAGGATCCCACCAACACCTATGAACAGCTTTGTGGAAAGTTCACCATCCACTGAAGAACCAGCTCTGCTCTGTTCAGAAGACGTGACCCCCAAGACAGTCAACACAGGCCACCCAGGGCCACCTCTAACCCGGGCGCGATGCAGCAGCTGGTGGGATGGTTTGGAAATCGACTCTAAAAACATCGTGGATGCATGGAGTTCCAGCAAACAGGAATCTGTCTTCCAGAGCCCTGAGTCCTGGAAAGATCATAAGCCAAGCCCAGCTGATAGAAGAGCCTCAGACTCTATATTTCAACCCAAGAATCTCGACTTCCCAAAGTCAAGTCCCTGGGAGTCAGAATTTGGTCAATCTGGGCTGGGCAACAAGAATATTCAAGACTCAGATGAGAAAAACTTCCAGTTTCAGGACATGCCCCCTGAGAAATCACGTTTGCTGAATGTTTCTCCTCACGGAACAAACCACCTGATAGAAGACTTCGCTGCCCTGTGGCGTTCTGACCGCTCTCCCACAGCCATGCCTGAGCCGTGGGGAAACCCCACAGAGGATGAGGAACCAGCTGCTGCAGCGTCATTCCCAGCCTGGAGTGCATTTGGTGAAGAAGGTGATGCCAAAGCTTTGAAAAATACTTGGAATCTGCACCCAACGAGCAACGAGACACCTTCTGTGAGAGACCCAAACGAGTGGGCCATGGCCAAAAGTGGGATTGCTTTCCCTTCAGAAGACCTCGTGGACAGTTCACCCAGTGAGGCAAATAATGAAGCGGTTCAAAAAATCTGGGGCAAGAAGAACCATGACCCCAGGGATGATATTCTCATATCTGGAAATCCCACATCTGATCTGGATCATCCATGGAATAGTTCTAAGCCAGCAAAGGACCATCAGAACAGTGTGGTGGACCCAACAATTAGGGGCAAAATGTACAAAAATGTAGATTCTTGGAATCTTTTCGAGGAGAGTAACAAGGAAGGAGGTTCAGATGTCCCAGCACCTTGGGAGGACTCCTTCTTATCCTATAAATGTTCTGACTACAGTGCATCCAACGTCAGGGAAGACTCAATGCCCTCCCCCTTAGATACCAACTACTCCACCTCTGACTCTTATACTTCACCAACATTGGCCAAAGAGGAGAAAGAAACCAAAGACAAGCCACTCACTAAAGAGGAGGGTTTTGAGTCACAAGATGCTAATTGTACTGCAGGGGGCGCTGACATGCCTCCTCAGTCCCCGCAGCAGCCACCAAGAAATCGAATGAGTTCAGGTCCTGGGAACCTGGAAATGTGGGCTTCATCTCAGGCAGATGGTGGCACAGAAATAAATGCCACCCATAGCCCAGATAAAGATCTACTCCAAGTAGAGCCCACGGATGATCAGAATGTCTCCTTTGAGGATGACATGGGGGAAAGCAGCCAGTCCAGTTATGACGACCCCAGCATGATGCAGCTGTACAACGAGACGAACCGACAGCTCACACTTCTGCACAGCAGTGTTCACGCCCGGCAGGCAGCCCCTGACAGCCTCGACACGTGGAACAGAGTGATTCTGGAGGACACTCAGTCTACTGCAACCATCTCGGATATGGACAATGACTTGGACTGGGATGACTGCAGTGCGGGCGTGGCCATCACTGGTGAAGGTCAGGCACAAGGGTACATGGCGGAAGGTAGCGAACCTGAAACCCGATTTTCAGTGAGACAGGTAGAACCCTGGGGCGTGGAGTATCAGGAGGCAAATCAGTCAGACTGGGAACTCCCTGCCTCTTCTGAGCACAGCCTGGACGTGGCTCCTGATGAATACCACGTGCTGAATGAGAAAAGTGGGCAGCTGATCGCGAATAGTATTTGGGATTCTGTCATGAGAGATAATGCCATGTCATCATTAATATTACCTAGCCCATCATATGCTACAGATACAGAACAGAGCAGATCACCTCCTGAAACAACCAGCTCATTAGAAAAAATTCAGGATAGTCACATTGCAGACGTGCTGGAAGCCTCTGAAGCCAGTGAGTCTGAAACAATCGATCCTGACAAGCAGGACACATGCAGAGGAACCCTGCCAAGTGATTCGGCATATTTGGTGACCAGACTTGAGAATCCAGAGCATTTTGCATGCTCAGATCCCTGGAAGGGTCCGAGCTATGGACAAAAGGAAAGTGAGAAGGAATTCCACGGAGCTGCTGATAGGGAGAATTCCAGTGATGAGCTAATGGATGGAACCTCAGAACCTTCTGGAAAAGGGCCAGGTAGCCAGGAATGCCCATCCCCAGCTGCATCTGATCATCAAGAAATCTCCAATGAACCAGGCAAAATCAGAAATTTTTCAGTGACTTCCAGTCCTCAGACCAAGGAACCCCAGGAAGTATTAGAGCAGGAGAAGGGGTCTTACACTCCAGACCCCTGTGATGTGCAAACAGAGGTGTCCGAAGATCACTTGCCAGCAAGAGAGACCTGTGAAGAGCTCCTCATAAGCCCCAGAAGAAATTCAAGTGAAACTACTGAAATTCCAGGTAGGCTGAATTCCACAAAAAGTGTGTGTCTACCTCAAGTGGATGTGGAGAAAGCTGAAGAATGTGACATTCTGGAGCCAGAGAAAATTGACCAAGAGCCACCTGATGAATGTCCCCAAGGCCTTGACTCTTGGGATGGCCCTAACGACAGTGATGTGCTGGTCAGTGGTGCAAGTTCTGAGATAACTATGAATCTCGAAGTTAGAAATACTGAAAACAGCCCTCCAAGAGCCAATTTATCAGGAAATGATGACAGAGATAGTATTTCTAGTGAGTATACACTTTCAAGTGCATCTAGTCCTGACATAAATGATTCTTCAGCTACATTGCCTTCCTGGGACCAAGGACTCAATACTGGGCATCAGAAGGAAAATCAAAATGATTGGAGTACACAGAATCGCCAAGAATCTGAACTAATGACTACTGATGGTCATACAGAAGTAGTTGCTGAAATGCAGGGTTTGGAGAAAAACAGAATGGACAGGTTTGAAAGGAGCTTAGATCACAAGGTTCCTAAATTTTTAGAGTTTTGGGGTGACTCAATAGATGGTGATTCCTTTTCTTCTTTATCCAGCCCAGAAACAGGTAGATATTCTGAATATTCAGATGCGTATCAGGAAAGAAAGCTAGTGGTCAGCCATCAGGAGAAAAATGAACGTGATCTTCCTGAAACTGTACAGCCAGAGGACACCAGCTTCATTTCAACAAGCTCAGGTTCTGATGATGGTGAAGGCTATGAAGAGCCAGTGGAGAAAGAGATCCATTCGGATACTTGTCAAGTGGCTCCGAGTGAACTCAGAGCTTGGGATTCATTGAATAAATCTAATAAGTCCTTGGCCACAGCAGATCCTGAATCTGAGCAATGTTCTGTCTATAGAGGCAGTCCAGAGCAAGCAGAGAATGAGAATAAGTCAAACCCATCCTGTGATGATCAACAAAGCAGCCCTGATCACTGGAATTTCTCACCAGTAAGGAAGACTGAATTACAGGTAACATCAGTCGATAAGGAGACAAGGTCTTCTCCAGAAATAGGGAGGACAGGAGATATCATATGGCAAATATCTCCCAAAGCTGAACCAAATAATGAAAATTACTCTAAATTGGAAATGGCTGACTTCTCAACTGAGAGCACGGAGTGGTGGAAGCCCTCCCTACAGGAAGGACGACCAATCGAGAGTGCATTTGAAGGAGAATTATCTAACTCAAGTGCTGTGCTAGAAATGAATTCCTCAGTGTGCGAAAACATGGGTCCTTGGGGAGTGCCCATTCAGGGTGATACTGAATCCCTGGCACTACATGGTACCAATCCTTTCAATGATAACCATCAGTCACCCTTTCTAGATCATAATGGGGAGAATGCCCACGAGCAGCTTTGGAACATTCAACCAAGGCAGCCAGACCCAGAAGCTGATCAGCTTAACCAACTTGTAATATTGGAACAAATTAAAGACACAGATTCCAGAGAACAAACCTTCATGTCTTCTGCCGGTGACGAACTCTCCTCTGAAGTGCCTACGCAAGAACAGTGTCAGAATTCAGTGCTGTCTGCCTGGGACCAGCCAGACTCGTCTTGTACTTACGCAGATGAAAATGGATGCATTGTATCTGGTGTAGCAACAACTGAGTGTCAAGAAACAAATTGGTGGGAAGAAGAAAAATCACACCCAAGTGAAATGACAAATTCAAACATGACCTCTGAAGATTTCCCTGCTGTCAGTTCTCCCACCCAGATGATGAACAAGTCAGGCTCTGAATGGAGTAACTCTACCCCTACTGAGGGCCCCCAGGGCACGTTTGTTCCAGATATTTTACACGGCAACTTCCAAGAGGGTGGGCACCTGGCCTCATCTTCGCCCGACTTGTGGATGGGTGTGAAACAGCCCTTCAGTGTGAAGACAGATGGTGAGAATCCTGATATACTGACTCACTGTGACCACGACAGCAATTCCAAGGCTTCCAACAGCCCTGATGTTTGTCATGATTATGAAGTAAAGCCAGAGACTAAGCAGCACATCGATGCTGGGCTGGGACCTGAAAGGGAAGCCAGTGAGTTATATCTCACTGAGCCAGAGATAGATGAAGAATCCAGACAGGAGCCTGGGCAGGAATTTGTCCCTTATACTTCAGAACTGTCCTCTGAAAATGTCATTCCACTGCCTCCAGTCAGCGAGCAGACAAACACAAATGACTCATCTCAGCCTTCCTCTCACGAGTGTTTTCCTGAACCTTCTGAAATTAATGGTGAAAACAATGCAGGCTTAAAAGCATCAGAACAAGGAGCCAACCCAGATATGGCACCAGTTTTGGAACCTGTTGACAGAACAATCTCAATGATTGAAAATGTGGAAACTGGTATTTGTGTAACTTACCAAGAGACAACTCTGGACGACAGTAGATCTTCGATATCAGAAGACTTTCTTCCTCAGAGGCAGACCGATGCAGGGGACTTGTTGGACCATGAGCAGCCCTCTGTTACTGAGAATCCTGCCACGGTTCCTGATGCTTTGCTAGCCTCGGACACTTGTCTGGATGTCAGTGAAGCTGCCTTCGACCACAGTCTCAGCGATGCCTCGGGTCTCAACACATCCACGGGAACAATAGATGACATGAGTAAGTTGACATTATCAGAAGGCATTCCTGAAACGCCATTTGATGGGGAGACAGGGAAGCATGATATCTGTTCCTCTGAAGCCTCGTGGGGTGACTTTGAGTATGATGTCATGGGCCAAAATATTGATGAAGACTTAATGAAAGAGCCTGAACACTTTGTTTATGGTGTTGACCCTCCCTTGGAAGAAGATGCCCTGAAGCATGAGTTGGCACCTTACACACCTCCCTTTGATTTATCCTATCTCACGGAACCTACTCCTGGCATCAAAACCACAGAGGAATCTGGGACTCCAGAGGATGAGTCTCTGGGGAGCGAAGCAGCAGAGATACTGCTTTCTGCCCTTCCTGATGAAAGAAACCAGGAAAACCATGCTGAGACCACAGACAGACAGCCCGAAGGCCAGCCAGTTGTACTGCACATTCACGAAGACCCTGAGTCTGTTCCTTTGCCTGTCAGAATTGATGCCAACCCTGAGTTGTCTCCATCACACATTGACTGGGAAGTAGAAACAGATCGTTCAGATTCACCAGCAGGTGGAGACATAGGACCACCAAGTGGTGCCAGTGAGGGAATATTAGAGTTGGAAGAAGAAAAAATAATTCCTACCAAAGAGCCTGAGCAGGTAAAATCAGAACATGGGGAGGAAAGGAACACTGAGAAGAAAGAAGATCGTCATGCATTGCACATGGATTACATACTTGTAAACCATGAAGAAAATTCACTGCCAGAGCCAGAGGCCTGTGAAGCTAGAGAAATCACATTGGAATTAGAAGAGCTTCACGTAGATTCCGAGGAAAAAGGGCTGCCAGAAACTCAGTTAGCCAGCTCCCCGGACACAGGTCAACCAGCTTCCTTAAATGAAAGAAATCATCTATCTACAGAAAGAATGTCTTCCAAAGATGATAAGAGATCATCTTCTGAAAGCCCTGGGCAAGACCAGAGTTGGATGGTCTTGGGCCGTAGTGAGGTTAGTGATCCATCATCAGAGACCATGGACTCAGGACCTGGATGGTCTGGTGAGGCTGTGGAGCCAGCCTCTGATCACAGCTTGGGCCAGAGCCCCCAAATACAGATTCTGGAAGAAATGAAGCCTCTAGAATCTTTAGCACTAGGGGAAGCCTCTGATCTGGGCAGCCAATCACGGAGGAGCAAGAGCCGAGGCAAAGCTGGCCCTGATGCAGTTATGTTGCAGCCTGTCACCCATGACAATGAATGGGAAATGCTTTCACCACAAAACATAATCCCTGAAATGGAAATGGAGGAGGAGACAGAGTTTCTTGAGCCCAGAACAAGGAAACCAAGACGGAATGGACTGCTGTCAGAGGATGTGGGAATGGACATCCACTCTGAGGAGGGGATGCTGAGTCCCATTGCTGCAGACATGAGGCCAGAACCGCCTAATTCTCTGGATCTTGATAGCACTCATCCTCGGAAAATCAAACTCACAGCCCCAAATATCAATCTGTCTCTGGATCAAAGTGAAGGGTCTGTTCTCTCTGATGATAACTTGGACAGTCCAGATGAGATTGATATCAATGTGGATGAACTTGAGACTCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGAGGATTCCACAGGCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCAGAAGAGGAGCGGGAGGACAACCGGCTGTGGAGGACCGTGGTGATCGGAGAACAGGAGCAGCGGATTGACATGAAGGTCATCGAGCCCTATAGGAGAGTCATTTCTCACGGAGGATACTATGGGGATGGCCTAAATGCCATCATTGTGTTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCGGACTACCACTATGTCATGGAAAATCTTTTCCTATATGTAATAAGTACTTTAGAGTTGATGGTAGCTGAAGACTATATGATTGTGTACTTGAATGGTGCAACCCCAAGACGGAAGATGCCAGGGTTAGGCTGGATGAAGAAATGTTACCAGATGATTGACAGACGGTTGAGGAAGAATTTAAAATCATTCATCATTGTTCATCCATCTTGGTTCATCCGAACAATCCTTGCAGTTACACGACCTTTTATAAGTTCCAAATTCAGCAGTAAAATTAAATACGTCAGTAGTTTAGCAGAACTCAGTGGACTGATCCCAATGGATTGCATCCATATTCCAGAGAGCATCATCAAGTACGATGAAG EMBV3_26274 CTCCTGAAGCTGGCTTGTGAAGACACAGAAGGGACAGAGACCAAGATGTTTGTGGCTCGA Gene GeneID:788617|LOC788617:XM_002689041:119_cdna Constitutive 0 NULL GeneID:788617 7 GENE LOC788617 NULL similar to olfactory receptor Olfr1385 EMBV3_14244 AGGCCAATACCTGAAACGCATCCGATACCACGGCAGAGGTCGCTTTGGGATTATGGAGAA Gene GeneID:614639|MRPL22:NM_001035454:26_cdna Constitutive 2 NULL GeneID:614639 7 GENE MRPL22 MGC127975 mitochondrial ribosomal protein L22 EMBV3_11650 CCGGGCCAGAAGCCGAGCAGCTGCGCCACGGTTTTGAATGAGGAATGTGATCAGAACTGG Variant GeneID:535298|GRB2:NM_001034630:2_cdna 196^411 1 EMBV3_34817 GeneID:535298 19 GENE GRB2 MGC127576 growth factor receptor-bound protein 2 EMBV3_37166 AAATCAAGGTTAAAGACCTCCACGACAGATTTCTTTTCAGTGTTCACAGTAGCGGCTTTG Gene GeneID:520056|NETO2:XM_002694872:854_cdna UTR3_Alt 2 NULL GeneID:520056 18 GENE NETO2 NULL neuropilin (NRP) and tolloid (TLL)-like 2 EMBV3_13825 TGTGTTTTGTACCTGCGGATCCTGCTCTGAATCTCCTTAGTCCTCCACTGTGAATCCGGA Gene GeneID:789163|LOC789163:XM_002695994:377_cdna Constitutive 2 NULL GeneID:789163 19 GENE LOC789163 NULL hypothetical LOC789163 EMBV3_19945 TGTTGGGAGAGGCAATCTGCCACAAGCCGTGAGCCCATCCCTGCAAGTTCTTCATGTAAA Gene BVV0102_242128 + 1 EMBV3_10916 GK000015.2:55022697-55029089 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065132 1 XLOC_039854 NonCoding TCONS_00065132 XLOC_039854 NonCoding NonCoding - 15:55025702-55026329 - TSS48875 627 1 TCONS_00065132_1 120 0.551834130781499 1 0 0 0 0 1.32442591492236e-05 0 0 0 0 0 0 3.65101503307346e-06 0 0 0 0 0.00235893143952519 0 8.00346992316982e-05 0 2.29392781285274e-05 0 0 7.3158290239019e-05 0 0 0 6.54131437312652e-05 0 7.74260404258888e-06 0 0 noncoding 0 0 0 0 0.0662606772379556 0.658118230158433 0.0346548041119016 0.48685955825004 GGCAGGTGTTGGATTGTCTTGCAGCCAGCTCCCTCCTGCTGCTTATCATGCCACCCTTAGATCCATTCGGAGACAACAGTAAAACTCTCCAAATTTTTTGCAGTGGATCTTGGCTGCTGTAAGGGAGCTTTGGCTCTTTGAGGGAGATGTCCCTGTGACTGACAAACTGCTCTGGGAAACAGTTGATTAATATCGAATAGTACTCAGTATCCAGGCTCTTAGTGCCCTGGATTTTGTGTATAATGCTGTCAAAGGTGACCCACTGGGGAATGAGTGTTGGGAGAGGCAATCTGCCACAAGCCGTGAGCCCATCCCTGCAAGTTCTTCATGTAAATGCAAAGACCCTGGCCACTTCTTCTGGGCCAAATCTCAGTATTCTCTTGGTAGTGAGCAGCCTAGGGAGAGGAAGTAATATCTCTTTCCTGGAGCCGGTTTGCTTACTGTTCACTAAAAGTGTGGACTCCCCCCAAGCTCAGGGTTCTTTTCTTATGACACAACCTACTGTGCATGTGGGCACCCATCTAGGCCTACCTGTGTCAGTTTTGTTGGGGAAGGGGAATGGGGAACTAGCACAAACCTGTCCATTGCTGTTTGCTGCATCATAAGTAATAAAGTTCTTTGATCCAG TCONS_00059627 . 3' 942 TCONS_00059627 . 3' 1568 EMBV3_12517 CAGTCTGGAGGATGTTGTCTACCGAGGGGACATGCTTCTGGAAAAGATACAGAGCGCACT Gene GeneID:539496|MED21:NM_001038566:17_cdna Constitutive 2 NULL GeneID:539496 5 GENE MED21 MGC133576 mediator complex subunit 21 EMBV3_24221 AAAGACCATCTGCTTTAAGACCCAGGCTACTGCCTAGAAGCCGTGTGCGTTTGTCACCTT Gene BVT0102_435346 - 1 EMBV3_39966 GK000011.2:103964032-103985233 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02574 TTCTCATTGAATCATGAGAGACTGTATTTATAGGTAGTACTCTAAGTAAACCTCATGTTG Gene GeneID:514432|BRMS1L:NM_001083428:20_cdna Constitutive 3 NULL GeneID:514432 21 GENE BRMS1L MGC143052 breast cancer metastasis-suppressor 1-like EMBV3_31190 GGGAAGGTGTTTTGCTCTCTACTGACCACCCTCCAGGGCATCATTCAATTCCAAGTCTCA Gene BVV0102_138453 - 1 EMBV3_02830 GK000021.2:13422064-13573053 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20598 GGAGCCCCGCTATGTCGTATCCATGGGGAGCTGCCCGCCTACGGCCGAGGCCCTGCTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34605 GTGATTCAAGCCAGCCACCTGCCCCTTCTTTCCAGGATTCTACCACTCAGCTCTGATCAA Gene BVT0102_031323 + 0 NULL GK000002.2:95903311-96254082 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103092 TCONS_00103095 TCONS_00103091 TCONS_00103093 TCONS_00103094 TCONS_00103090 1 XLOC_062014 NonCoding TCONS_00103093 XLOC_062014 NonCoding NonCoding LOC100847666 2:96101200-96105807 j TSS76627 1119 1 TCONS_00103093_2 58 0.369079535299374 3 0.757707338254451 0.00616299744980651 0.0114000709928053 0.00643228824798308 0.00224985102598893 0.00587412593892575 0.00174866783396708 0.00172973463695728 0.00212943572755757 0.000914239271909456 0.00020381248249147 3.08565508036818e-39 1.38217073887626e-13 0.000233337002135386 0.000395149394824119 0.000276134392046026 2.30103231161021e-05 7.73957216484899e-13 0 0.00677748781931168 0.0125859552253408 0.00367716764611088 0 0 1.16034135977782e-12 0.00464687235130728 0.00562830529101698 0.00585381964846163 0 1.79987251744694e-05 0 XR_138639.2 LOC100847666 PREDICTED: Bos taurus uncharacterized LOC100847666 (LOC100847666), 3e-179 632 100.00 0.311885612153709 NM_022097.3 CHP2 Homo sapiens calcineurin-like EF-hand protein 2 (CHP2), mRNA. 3e-14 84.2 89.06 0.0563002680965147 0 noncoding TCCATGGAAGACACAGACGGAAATTGTATCAGTAATTAATTCACAGCCAACGTGCCACTTTTTCTGCAAACTAACCCCCAACCTTCAAGAAGCCATTGATAACAACAGAAAGTAGGAAACTCAGTCTTTCTGGTGAATTCACTCTGGTGTCGCTCTCTTGCTCTACTGCTTGTGCTGTATCCATCAGAAGAGAGGAGATTCCAAGACCTGGAGCACAGCCAGAGCCTTTCCTGCAGACTCCAGGACTTCAGGCATTTGACCCCAAACTCCTTATTTGTTTCATCCTCTCTTGAAGGACTGCAATCATGGTTTCTTCAGATGCACACTTAAGGAAAACTTCTCAACTCTTCTCCAAGAATCCCCTGCCTCCATCCCTAGAGAATCATGGCTTCAAAATGAAACATAAAACAAAGTTTTGAGCTGACTTTGGTCGAAATCTCAAATACTATAAGACAGAAACTGTACAGTACTGTCTGCAGGTGGACCACATTGTAGGGGAAATAACGTGATTCAAGCCAGCCACCTGCCCCTGCTTTCCAGGATTCTACCACTCAGCTCTGATCAAGCTAGCATCCCTCCTCCTGTCACCAGCAAAGCCCATGAAACATTTCCAAGAATTAAAAATAGAATCTGGGTAATAAAATAAAGTCTAACCTTTTTTCCCTTTGTGCTTGGACAAAGGAAATAGTTTCATTTGCTCATAGTGGGGCATGTGCAGAGGCCTCACACTGGCCATTCAGACCAGTTCCTAGAGCAAAATGGCCATGCCCACACCTCGGCTCAGGGCATGTGCAGGAGCGCTGTGAATGGCACTGCAGTTCAAGTTGGTGGCAGCAGGCTGTGTGCACAGAGCCGCTGCTCTGGCACTGTGACCCAAAGCCCTGAGCAGCATGCCTGCGCCGGACTCACGAAAGCTCCGCCCCCTTTCCTCCATAGTAAGACTTCAATAAAGCAGCCCTGCTAATGGCTTGTTGGGGGGAACGTGTGCTAAAGAGCAAGGTTCCCCAGCTTCTGGGATCTAATGCCCGATAATCTCGTGGAGCTGAAATAATAATAATAGAAATAAAGGGTATAATAAATGTAATGCGCTTGAATCATCCTGAAACCATCCCGCCCACC EMBV3_29999 TACATCCTCTTAGGCTAGATTCCCAGGCAAGAGATTATTTTGTCAGGTGTTGGATTAGTC Gene BVT0102_284498 + 1 EMBV3_35874 GK000006.2:92378161-92450669 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205791 TCONS_00205792 TCONS_00205787 TCONS_00205788 TCONS_00205789 TCONS_00205790 1 XLOC_124748 Coding TCONS_00205788 XLOC_124748 Coding Coding PPEF2 6:92446929-92462665 j TSS153585 4723 1 TCONS_00205788_1 304 0.678805843743383 7 0.700285986653956 5.00739295361278e-07 0.000749793809156533 0.000314398726860471 1.30471918014188e-11 0.000106882904311912 0.000157119099111424 0.000698503021223847 2.06752567202561e-20 0.0002250789431269 7.67946016915153e-06 4.03784367920476e-05 4.83621283966244e-13 6.89782024664782e-10 5.68443932474045e-09 1.00759274127492e-08 9.54043107308181e-13 0.000147590585684629 3.61143920037151e-99 0.00012963713158407 0.00106969132103545 1.03368881562512e-19 0 1.08791939948258e-06 1.18566742181164e-05 0.000478225077374628 9.87511333753637e-10 1.10401747768557e-07 0 0 1.38569984972313e-06 XM_005208093.1 PPEF2 PREDICTED: Bos taurus protein phosphatase, EF-hand calcium binding domain 2 (PPEF2), transcript variant X1, mRNA. 0.0 2219 100.00 0.260215964429388 NM_006239.2 PPEF2 Homo sapiens protein phosphatase, EF-hand calcium binding domain 2 (PPEF2), mRNA. 0.0 1263 85.74 0.229938598348507 TCONS_00205788_1 sp|O14830|PPE2_HUMAN PPE2_HUMAN Serine/threonine-protein phosphatase with EF-hands 2; 0.0 564 86.51 0.996710526315789 5 coding 0 0 0 0 5.94323909225425e-06 0.999959220478815 0.00121497065550384 0.979798559163862 GTAAGCTTGGTTTAGTGACTCAGCATCACTGTGGGGAGAAGGTGGTGGATATACTGTGGAGTGACCCCATGGCTCAGGAGGGCTGCAGGGCCAACACCGTTCGAGGAGGCGGCTGTTATTTTGGGCCTAATGTGACAGAGCGGTTACTACAGAAGTACCACCTGCAGTTCCTGATCCGCTCACACGAGTGCAAACCTGAAGGCTATGAATTCTGCCACAGTCGCAAGGTGTTAACCATCTTTTCTGCCTCCAACTACTACGAAGTTGGCAGCAACAGAGGAGCCTATGTCAAACTGGGGCCAGAACTGACCCCACACATCATGCAGTTTCAAGCTAACAAGGCAACCCACATGCTTACCATGAGGCAAAGGATTAGCAGAGTGGAGGAGTCAGCTCTGAGAGCCCTACGGGAGAAGTTATTTGCCCATTCCTCAGATATTCTTGTTGAATTTAAGAAGCATGATAAAGATGAAACTGGTCTAATCGCCCTGAGCGACTGGGCTGCAGCCGTGGAGTCCGTGCTGCACCTGGGGCTGCCCTGGCGGATGCTGAGGCCACAGCTGGTGAGCAGCTTGACGGATAACAAGCTGGCGTACAAGTCCTGGCTGGAGAACTTGGCCAAAGAAAAACTGAGCCAACAGAACATACAGTCAAGTTTGCTGGAAACACTGTATCGCAACCGATCCAACCTGGAGACCATTTTTAGGATCATAGACAGTGATCACTCAGGGTCCATCTCACTGGACGAGTTCAGGCATACTTGGAAGCTATTCAGCTCTCATATGAACATTGACATCACAGACGACTGCATCTGTGACCTTGCCCGGAGCATTGACTTCAACAAGGATGGCCACATTGACATCAATGAATTCCTGGAGGCCTTCCGCCTTGTGGAGCAATCCTGCTCAGGGGGTGATGTCTCAGATTGCCCACAAGTCACAAACAGTAGTAACAGGGACTGCAGCAGCCCAGGTGCACACTAAGGCCAGCTTTGTCCCCATCATCCAAGGTGCCTCAGAAGCAATGCCGAGCTCGTTGCTGGAATGTCTTTCTTATTCTCCATAAATTCATGGAACTTTATGCTGAGAATTTGCCTACCAATATGCAACAGAATCACCTGTGTATTCAAGCGAATTCTACCAAAGAACTTTTACCAATCTTTCTCAAACTTTTCCAAAAGACTGAAGAGGGAACCCTCCTAAAGATCATTCTATGAAACCACCATCACCCTGATACCAAAATCAGACAGATATCACCAAAAAAGAAAATTACAGGCCAATATCTTTGATAAATATAGATATTTGTATTTATAATGCAAAAATTTTCAACAAAATATTATCAAACTGAATGCAACAACACACAAAAATGATCATACACCATGACCAAGTAGGATTCATCCCAAGTTCACAAGGATGGTTCAACATAAGCAAAATCAATGGGAAACACCACATCAACAAAAGAAAAGACAAAACCCACATGATCATCTCAAAAGATGCAGGAAAAGCATTTCACAATTCAGTATCCACTCATGATAAAAATTGGGTTGGGGAACATATTTCAACATAATAAAAGCCATTTATGACAAACCCACAGCCAATGTAATACTCAACAGTGAAAAGCTGAACACCTTCCCGCTAAAACCTGGAATAAGACAAGGGTACCCACTCACCACTTCTATTGAACATCATATTGGAAGTCCGAGCAACAGCAATCAGACAATAAAAAGAAATAAATGGTATTCAAATTTATTTATTTATAAATTTATTTATTTATTGGAAGGGGAGAGGTAAAATTGTCATTATATGCAGACAACATGATACTATATAGAGAAAACCCTAAAGATTCCACACAAATACTAGAACTGATAAATGAATCTGGCGAGGTAGCAGGATACAAGATTAACATACAGAAATCAGTTGCATTTTATACTAACAGTGAAATATCAGAAAGGGAATGTAAGAAAAAATAATACCTTTAAAATTTGCACCAAAAACCCCCAAAATTCTTAGGAATAAACCTAACCAAGGCAGTGAAAGATTTATATGCTGAGAACTATAAAACATTAATAAAGAAAATTAAAGCTGATTCAAAGAAATGGAAAGATATCTCATGCTCTTGGACTGTAAGAATTAATAGTGTTAAAATGGCAATACTGCCCAAAGCAATCTACAGATTTAATGTGATCCCTATCAAATTACCCATGACATTTTTCATAGGACTAGAACAAATAATCCTAAAAATTTATATGGAACCATAAAAGACCCAGAATTGCTAAAGCAATCCTAAAGGAAAAGAACAAAGCAAGAGATGTAATTCTCCCAGACTCCAGACAATACTACAGAGCTACCATAATCAAAACAGTGTGGAGTTGGCACAAAAACAGACACACAGATCAATGGAACAGAATAGAGACCAGAAACAAACCCGCACCATCAATAGAGGAGCAAGAATATAAAATGGGAAAAAGACAATCTCTTCAATAAGTGGTGATGGGAAAGTTGGAGAATTGCATGTAAATCAATGAAGTTTGAACACACCCTCACACTAAGCACAAAAATAAACTCAAAATACCTTAAAGACTTAAACCTAAGAAATGACACCATAAAACTCCTAGAAGCAATCATAGGCATTCTCCAACATAAATTGTACCAGTGTTTTCTTAGATCAGTCTCTCAAGGCAACAGAAATAAAAATGAAAATAAACAAATGGGACCTAATCAAACTTACAAGCTTTTGTACAGCAAAGGAAACCATAAACAAAATGAAAAGACACCGTATAAAATGGGAGGAAAATCTGCAAATGATATGACCCACAAAGGTTTACTTTCCAAAATATACGAACTCATAAAACTCAACAACAAAAAAACAAACCCAATCAAAAATGGGCAGAAGACCTAAACAGACACTTTTCCAACGAAGACATACAGAAGGCCAATAGGCACCTGAAAAAATGCTCAACATGGCTAACTGTTGGAGAAATGCAAATCAAAACTATAAAAGGTACCCCCTCACACCTATCAGAATGACCATCATTAAAAAGTCTACAAATAAATGCTAGAGAGTGTGTAGAGAAAAGGAACCCTCCTCCACTGTTGGTGGGAATGTAAGTTGGTGCAGCCACTATGGAAAACAGTATGGAAGTTCCTCAGTAAGCTAAAAATAGAATTACCGTATGATCCAGCAATCCTACTCCTGGGCATATATCCAGACAAAACTATAATTCAGAAAGATACATGCACCCCTATGTTCACAGGAGCCCTATTTACAATAGACAACACATGGAAACAAAGTAAATGCCCACCAACAGACGAATCGAGAGAGAAGATGCAGGGTGTATGCACAGTGGAATACGACACCCATCAAGTCCACTCCCAGTGGAATACTACAGTCATAAAAAAGAACAAAAGAATGCCATTTGCAGCAACATGGTGGACCTAGAGATGATCACACTAAGTAAATAAGTCAGAAAGAGAAAGACAAATACCATGTGCTATCACTTATATGTAGAATCTAAATGAACCTAAAGACCGAAGTAGACTCACAGATATAGAGAACAGACTTGTTGTGAAGGTGGGTAGACGGGGGAGTGATGGACTGGGAATTTGGAGTTAGTAGATGCAAACTATGACATAGAGAATGGATACACAACAAGGTCCTACTGTATAGCACAGGGAATTATATTCAATATCCTGTAATAAACCATAAGGGAAAAGAATAGTGAAAAGAATGTATGTATACAACCGAGCAGAAATGAACACAACATTGTAACTCAACTCTGCTTCAATTGAAAAAAGTATCACCTGTGTATTGGGTATGGAGGATGAGATTATTTTTAATAGGTCCCCAGCCCCATCTCAGAATTTTTATAAGGTAGCACCCAGGTGTTAAGTATTCTGAAATTCTGAGGTCTATCCTAGTTAAGAACTACTTATAATTCAACCCCTTCATTGTTTTCATTGTATACCTTTTATTTATTGTTTTTATAATGTCTTATTGGTAAAGGTATAAGAAATTGTATAATCCATGACCAAAACATATGTATCCTTTTCCTTATTTACTTTTTCTTGTTATAACTATAATGTTTATGTAACTTAATGTTCTGCTTGTTTTATAAATTCACATCTGTGTTGCTACATAGTCTTCATGATTATTTATTAATGGCTGCATAATTTCACATAGATGTAATTAATCTATTTAGCTATTCTCCAATTGTTAAACATGTATTTCCAGGTTTTCATTATTATAAATAACACTGGTTCAAAACTTTATGCAATGGCTTGTTTCATAAAAATCGTTCAAATTATACATCCTCTTAGGCTAGATTCCCAGGCAAGAGATTATTTTGTCAGGTGTTGGATTAGTCTATAAGAAGGTTTACTGTAGGGCTCACATGATTATGGAAGCCAAGAAGTCCCAAAATCTTCAGTCAGCAAGCTGGAGACTTCAGAGTTGATGGTGTGGTTCCACGTTGGTTCCAAAACATGGTTTTCAGCTGATGGGTACAAAAAGCCAGGACCTTCCCTCATACAAGGAAATAAATTTTGCGAACAACCTGACTTAACTTGGAAGCAGATTCTTCCAGAGGTAGTTGAACCTCCTGGTGAGAAGTCAGCCTGGTTAACACCTTGACTGCAGACTTGTAAGACCCTGAGCTGAGGACCCAGTAAAGCTGTGCCTGAATTCTTGACCCAAAGAAACTTTGAGATAATAAACGTGTGTGGTT EMBV3_18122 TGTACAGAGCTTGTTATGGTGGCCTGGTTGAGCGGAGCTTTCTATGCCATCTTTCACACC Gene GeneID:524985|LOC524985:XM_002689059:41_cdna Constitutive 0 NULL GeneID:524985 7 GENE LOC524985 NULL similar to olfactory receptor 313 EMBV3_24486 TTGACCTTTTCTGATCTAGTGATTTTGGGATTTTTTGTACTGTTATACTAAAAAAGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16973 AAAACAGGCGCACACACTCCTCCCAGTAAGAAGGCCAGCAATGATGCTAGTCACAGTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12521 TGTGGACTGAGCAATCAGAGTCTGTGGCGATCATATTGCTGAAAATGCACTGCATTTATT Gene GeneID:529312|SSR1:NM_001102122:220_cdna Constitutive 2 NULL GeneID:529312 23 GENE SSR1 MGC140667 signal sequence receptor, alpha EMBV3_25872 GACTCTTCTGACAACCAGCATTTTTGGCTTCTGTTGAAAAGCATGTGGGCTGCTCATCCG Gene BVT0102_033270 - 0 NULL GK000008.2:84014156-84094280 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226061 TCONS_00226058 TCONS_00226065 TCONS_00226062 TCONS_00226057 TCONS_00226060 TCONS_00226059 1 XLOC_137913 Coding TCONS_00226060 XLOC_137913 Coding Coding LOC789977 8:83978618-84135241 j TSS169101 6454 1 TCONS_00226060_8 1397 0.034242330337775 19 0.958913817982148 0.000661932933506511 0.00198075915774509 0.00108592018094818 3.98782875613753e-05 0.00151201612601686 0.000165025599218394 2.33867518295185e-05 0.000285648656925876 0.00280876989801973 1.31605489916319e-09 1.54596331808815e-09 2.9186279465911e-07 0.000228077716411146 5.18089924847723e-10 0.000480953489001956 0.00252730195291904 0.000452385875055242 0.0011353074008967 0.00216229359485318 0.00200405606839094 0.000549755354574177 1.85545427707313e-30 0.000168653218235522 0.00109468543070618 0.00316637374063241 0.000622299541834243 0.000206520583538272 7.70765440519118e-09 5.2096048347952e-18 0.000383579995236757 XM_005210398.1 ERCC6L2 PREDICTED: Bos taurus excision repair cross-complementing rodent repair deficiency, complementation group 6-like 2 (ERCC6L2), 0.0 1.102e+04 100.00 0.946699721103192 NM_001013608.2 Ercc6l2 Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 (Ercc6l2), transcript 0.0 4062 79.74 0.708862720793306 TCONS_00226060_8 sp|Q5T890|RAD26_HUMAN RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like; 0.0 1101 94.92 0.392984967788117 4 coding 1 1 1 1 -0.273451881989699 0.217159406423189 0.00191933750125942 0.968169128508919 GTTCGGGTTGGAAGCTACGCTGGGTTGCAGAGGGAGGCCCAACAGTGAGAGGCAGGAGGGTAAAGGGTCGAATAGGCAGCCTGTTGTCTACCCTCGCCGGCGGAGCTCCAGGCTAGTAGATATATGGCATCCAGGAGAACGATGTCTTGCCCCTTCTCCAGATAATGAAAAACTTTGTGAAGCAAGCATAAAATCTATCACAGTGGATGAAAATGGAAAGTCATTTGCAGTCATCTTATATTCAAATTTTCAAGAAAGGAGAGTACCTCTTAAGAGACTTCAAGAAGTGAAATCTGTTAAAGATTGCTCCAGGAATTTTATATTTGATGATGAAGATTTGGAAAAACCTTATTTCCCAGACCGAAAATTTCCATCGTCAGCTGTTCCTTTTCAATTATCTGAAAATGGAGACTCTATTCCTTATACTATCAATAGGTATTTAAGAGACTACCAAAGGGAGGGAGCCCAGTTTCTCTATGGACACTTCATCCAAGGAAGAGGGTGTATTCTCGGTGATGACATGGGACTTGGAAAAACTGTACAGGTTATTTCATTTTTAGCTGCAGTTTTGGGTAAAAAGGGAACTCGTGAAGATATTGAAAATAACATGCCAGAGTTTTTACTGAGAAATATGAAAAAGGATCCCCCTTCTACAGCAAAAAAGATGTTCTTAATAGTTGCTCCTCTTTCTGTCCTCTACAACTGGAAGGATGAGCTGGACACCTGGGGATATTTCAGAGTCACTATTTTACATGGTAACAAAAAGGATAGTGAACTGATTCGTGTGAAACAGAGGAAATGTGAAATTGCTCTAACAACTTATGAAACACTGCGATTATGTCTGGATGAACTTAACAGTTTGGAATGGTCAGCTGTCATTGTAGATGAAGCGCATAGAATCAAGAATCCAAAGGCCAGAGTAACAGAAATTATGAAAGCTTTAAGATGTAATGTCCGAATTGGCCTCACTGGAACCATTCTTCAGAACAACATGAAAGAACTGTGGTGTGTTATGGACTGGGCTGTGCCAGGACTATTAGGTAGCAGGATCCACTTCAAGAAGCAGTTTTCTGACCCAGTAGAACATGGTCAGAGACACACAGCAACAAAAAGGGAACTAGCTACGGGCCGAAAGGCCATGCAGCGGCTCGCAAGAAAGATGTCTGGGTGGTTTCTCAGACGAACCAAGACTCTAATCAAGGATCAATTGCCTAAGAAGGAAGACCGGATGGTATATTGTTCTCTGACAGATTTTCAAAAAGCTGTCTATCAAACAGTATTAGAAACCGAAGATGTGTCTTTGATACTTCAGTCTTCTGAGCCTTGTACCTGCAACAGTGGCCAGAAAAGAAGAAATTGTTGTTATAAGACCAATTCACAGGGCGAAACAGTGAAAACCTTGTATTTCAGTTACCTTGCAGTCCTTCAGAAGGTAGCTAACCATGTGGCATTACTGCAGACTGCTAGCACCTCTAGACAACAGGAAACACTTATCAAAAGGATATGTGATCAGGTATTTTCCAGATTCCCAGATTTTGTGCAAAAAAGCAAAGATGCAGCCTTTGAAACACTTTCTGACCCAAAATACAGTGGAAAAATGAAGGTTCTTCAGCAGCTTTTAAATCATTGCAGGAAAAACAAAGATAAAGTTCTTCTTTTCTCCTTTTCCACCAAGTTGCTTGATGTGCTGCAGCAGTACTGTATGGCATCTGGACTGGATTACCGACGACTTGATGGAAGTACAAAATCAGAGGAAAGAATCAAGATTGTGAAAGAATTCAACAGTACTCAAGATGTAAACATTTGCCTTGTCTCTACAATGGCTGGTGGACTAGGCCTTAATTTTGTTGGTGCCAATGTGGTTGTATTATTTGATCCTACATGGAATCCAGCCAATGATCTTCAAGCAATTGACAGAGCATATAGGATCGGGCAGTGCAGAGATGTCAAAGTGCTTAGGCTGATATCCTTGGGAACCGTGGAGGAGATCATGTACTTACGACAAGTATACAAGCAGCAACTTCACTGTGTGGTGGTTGGAAGTGAAAATGCCAAGCGATATTTTGAAGCAGTTCAAGGATCAAAAGAGCATCAAGGAGAACTTTTTGGAGTCTATAATCTCTTCAAACTGAGATCCCAAGGGTCTTGTCTTACAAGGGACATCCTGGAGAGAGAAGGCAAGGTGGAAGCTGGGATCATGACAGCTACAACGTGGTTGAAAGAGGAACCTCCAGTACACAAACTAGAAACAGCTAGGGAGCCTGACTGTCGGGAACACAGAGGTCCAGAACAGCTAGCAGAAGCAGCATGTGATCTCTGCAGTGATTTTAGTGAGGATGAAACAGCAAGCAACTCAGTAACAAAGACTGTGAAAAACAAAGCATCTGACTCAAGTAGAGCTTCAGTTTCTCCTGGGCAGTTTAGCTTACTCCAGTGTGGTTTCTCTAAATTGTTTGAGACAAAATGTGAAACAGTTGAGGATGGTGATGAAAATATTGCCTCTGACAATGAAAGTTCGGATGAGCAGCCCACATGCTTTTCAACAGAAGCCAAAAATGCTGGTTGTCAGAAGAGTCAAGACTCTCTTGGTACTTTGAAACATCAGAAATTAGCTAATGTCCTAAATCCAAATGGAAAATGTGTTTTTGAGAAAAGTGAGAAAATTTTAAAAGAGAATATTCCTTCTGAGTCTGATGATGAGAAAAACTTTAAAAACACAGTTGACCACCATCACATTTTACAGAATGTCACAGAATCAGAAGATAGTGATATCATCTTTCCCACACAGTATACAACTCAGAGATTCCTTAAGAAGAATATAAGGTTTAAGCCACCTGTGGATGGATCTGAAGATTCTGAATCAGAAAATCCTGTAAATATAAAAAATAATGGTGATGATACAAAGACCAATGTCAGAGGAAATGGGCTAATTTCAAAACAATTAAATCTTGAGATTGAGACCCTGAAATCTAATACAAAAAGAAAAGGTGGTAGTGATATTAGTGATGAATCTGATGACATTGAAGTTTTCTGCAAGTCAAGAGTAAGAAAGCAAAGAGCTACTAGTTCTCTGAGGTTTAAGAGAAAAAAGGAAAATAAAAGGGAACTTTACACTTTTCCAAAAACAATGAAGAAAGCAAACCAACAGTGTGCAACAGATGAAGATTGTAACTCTCAGACTATTGATGATTTTTCATCCTCAGATGATAATTTATCTGTTGGCCACATCAGTTTCTCTAAACAGAACCATAGACCAAAAACTATAAAAGATAAAATCAGTGTCTCTTCAAAATTAACTAACCATAAAAGAAATAGCACTTTCATACCAAGAAAACCAATGAAATTTTCAAATGAGAGCGTTGTCAATCAAAATCGGATATGTGAATCAATGGATAAATTTTTAGATGGTGTTCAGGAAGTGGCTTACATTCACTCAAACCAGAATGTGATTGGGTCAAGCAAAGCTGAAAATCACATGAGTCGATGGGCAGCACGTGATGTATTTGAACTGAAGCAGTTTTCTCAGCTTCCTGCTAACATAGCTGTTTGCACTTCTAAGACACATAAGGAAAAAATGAAGGGCGATATATCAACACGTACAAAGGAATGCCAACCACTAAGTGAAGGCAGCATTTCATTTCCTCTTTACATTTCACACCCTGTAAGCCAGAAGAAGAAAAAAGTCTGCCGAATAGACCAGACCACCTTCATAATTGGAGAAACACCGAAGGGGATCCGCAGAAAACAATTTGAAGAAATGGCTTCTTATTTTAAGTTGTCTTCTGTAAAGGAATTTGCTAAACGTGTAACTAACGCCACATCAGAAGAACGACAGAAAATGCTAAGAGACTTTTATACTTCTCAGTATCCAGAGGTAAGAGAATTTTTTGTGGATTCTCCCTCAGAATGCACTAAGTCTGCCTCTGAGAAAGGAGAGAGAGTCGAGAATAAGTCTGAAAAAAGACAATCTCTTATGAAAGAGCAGCCATCAGATTCTGAAACTTTGTCATTTAAAAATTCTACCAAAAAAATTTCTCCAATTTTCAGCCCCAGCATATGTAAAAAAAAATCAATTAAGTTTCAAAATCACAGTTCCTGTAAAAAAAAGGTGCTTTCCAATGATGTAGAAACTAAGAAATTACCTATAAGCTGTACCCAAGAGACTGACGGTGGGGAACGCAGCCAAGCATCCGAAGGTACTGCAGCATCCTGTTCCCTGAACAGTAAGTCTGGAGCAGATGAATTGGGAAAATTGGAAAATGCCGGGAAAGGCCAACAGGATCTCACCAGTTTGGGTATTTCAAGAAATGGACCCATCTTCCAAGTGGAAAACAAAACAATAGAAAATCCAGTGTTAGAAGACACTTCTGTGGTAGGCTTACTTGGTGACACCTCTATTCTTGATGACCTCTTTAAAAGTCATGAGAATAGTCCCACACAGCTGCCAAAGAAGGTTCTTTCTGGGTCCATAGAAAAAGCGAAACAGAGACCAAAAGATTTCTGGGACATCTTGAATGACCAAAATGACGACAGTCTTAGTAAACTCACCGACTTGGCAGTAATAGAGACTCTCTGTGAAAAAGTGCCTTTTGCTGCATCTTCCAAAAGGAAGGAGGATCTTGAAGCTTCTCTTTGGAAATCAAATGAGAAATTTTTGTGGAAAAAATTTAACTCAAGTGATACAGATGAAAGCACAGCTAATACACAAGAGTGATACATTAACATATAGACGAATTACTACAACCAATGAATTTCTGCTATCAATGTTTAGAACTCTGTATTCCACACTAATTATGTTACAAAGTTGTCAATATATATTTTTAATAAACCCTCGCTCTGGATTTTTTTTTAAGTCTCAAATGTTAACCATGTGTTAGTTTTCCTTGATAGCTGATTTGATCTTTAAAAAATATATATGATAGTATTATAATATAAACCTCTATTATGAAATGGAAAAGATCCTAGATTTGTTACTAGGAAACCTGGGGCATCTCTCATTATAATTATGTGACCTTAGATAAGTCATTTAGGCTAGTGTGCAGCCATTTCCTCATAATGAAAGATGAAGGGCTTGAAATTAGTAAACATGAGTATCTTCCAGTTTAAAAACACTTTGTTTCATTCTCCTAGATTCCATTAAGTCATAGAACCAAATTATGCTTACCCCCCCAAAATATCAAGTGTACATTAATGAGTTTCTTTCTTACTAGCATTTGGAAGATTATTGTTTTCCTTTTCCCTCAGTATCATGTGCTACCATTATGAAATTATTTATACAAAAGTAATAATGAGTACTAAATACATGATGTATATTAAAATAGTAAGCTCATAACTGCTCAAAAGCAAAGAGTTAATGTTGTATAACTTTACTGTCAATATATGATGTATGATGCTAAAGTAATATAATTATTATCATTAGCCACAGAACACCAGTGCCTCAACTTTTATGCAAGTATATAAAACTTGGTATAGTACTTTTGTATTTCTCTTTGGTATGAATAAATGAGTAAACATTTGATTTTATTTAAAACTTTTACATTTTGTTGAATTTAACATGTTTTATAACCAATGAAATGTGCTTGTTGTTGAATTCACTTGTTTGGAAACATTCACTCAGCCCCTGTGTGTACTGTGCTGTGAGCACTAGATGTACAGGTGAGGCACTGCTACCAGTAAAACAAAGGAAACCATATCTATGAAGAGTCATGTCTGTAAAGCCCCTGGCACATAGGAGCGGATCCGAGCCTTCTACTGACCCACGCACAGATGCTCTGTGGCAACTTTCCATCAGTTGAACTTGCAGGGCTATGATGGGAGGAAGTGTCCAGGAAATAGCAGTGAGCCAGGAAATGGTGGTGCTCAGAGAACACTGAATTGTTCCTGTACTGGGGGGAGAGGCCCTTCGGAGTACCCAGCCATTGTAGTGTCAAGCTACTGCTCAGAAATGACAAAAAGAAAAAAAGAAAAACCTTTTCTCAGGGGACCGAATGGCCATTGAATGGCCTGACTCTCTAGGGCAGTGTTGAGAGCTATGAAATATATTTTACTTCGTGACCCAGTACATATGTGTTATATATATATATGAGTGAAATAAAATGTTTATGAAATATTTACCCTTAAGGCATGCAACATACTTTGATATTTTCTCTTCTGTTGTAATTTTGGTCTTGTATATGTATGTTTTTTTAATGTTTTCATAACCCACTAAATTGATTTCATGATCGCTAATGATTGGTAACCACAGTTTAAAAATTCAGTTTTAGGTTATATAGACTTAGTTGGGTTTTTTTCTTTTTTCTTTTTTGCTACTTGCAGTAGAATTATATCCAGACTTAATAGATGCTACATTTCACCACCAAGAGCTTGCTGCAAAATGAATGTGCTGTGCAGTCTGTGGTAGACTTAATATATAAATATTGGTAGACTGATGTGGGATCAGCTCTACCAGGACCTC EMBV3_38647 CTCATCTGGGACACTGCTGGTCAGGAACGGGATTCATTTCATACCTTGAAGAAGTGGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42402 TCCAACCTCACTCCCAACACCTGCCAGGGCCTGAGCCTCAACTGGAGCCTGGGGGACCCT Gene GeneID:616079|ADAD2:XM_002694742:124_cdna Constitutive 0 NULL GeneID:616079 18 GENE ADAD2 NULL adenosine deaminase domain containing 2 EMBV3_31619 CCAAACACTGTAATTCAATGAGATCACAGTACACTTGGCCCTAGGTAAAATTCTGACAAT Gene GeneID:540169|LOC540169:XM_002697241:427_cdna Constitutive 2 NULL GeneID:540169 23 GENE LOC540169 NULL similar to Uncharacterized protein KIAA0240 EMBV3_12570 CAGTAATTCATGTATTAACTTCAGCAAAGCTGTTAACTTATTGGGTCCGTGCTACTGAGC Gene BVV0101_022175 + 1 EMBV3_42768 GK000004.2:52222608-52230673 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184048 TCONS_00184049 1 XLOC_111262 Coding TCONS_00184049 XLOC_111262 Coding Coding CAV2 4:52228421-52236084 = TSS137144 2910 1 TCONS_00184049_2 162 0.0584192439862543 3 0.620595144870791 0.000529299680921285 0.000982669440504977 0.000526928010993313 0.000406473448575737 0.000732258292615214 0.00012417114857004 0.000315036556061157 0.000296034317773434 0.000735243660841961 0.000129972902874892 2.31303986645958e-06 3.17936656230737e-05 7.4020582822254e-05 8.48378730190272e-05 0.000212425165167887 0.00101444567605953 0.00139573902922562 0.00274316220666207 0.000354287136990092 0.000466035879554278 0.000111766816276543 0.000645567640202153 0.000642804581197373 0.00112863492214912 2.73680671326815e-06 0.000505673158324665 0.000497434076431244 3.14828477508235e-06 1.38223202253314e-05 1.76563410013751e-07 XM_005205393.1 CAV2 PREDICTED: Bos taurus caveolin 2 (CAV2), transcript variant X1, 0.0 4013 100.00 0.76426116838488 NM_001233.4 CAV2 Homo sapiens caveolin 2 (CAV2), transcript variant 1, mRNA. 0.0 1772 80.60 0.641580756013746 TCONS_00184049_2 sp|Q66WT7|CAV2_BOVIN CAV2_BOVIN Caveolin-2; 4e-116 330 100.00 0.993827160493827 1 coding 0 0 0 0 -0.122489167317397 0.292455950929142 0.010640026750868 0.89981450652684 GTCTCGCGGGCCGGGTAACAGGAGCCAGCAGCGGGAAGCAGCCGCCGCCCGGGCCGCGCTGGGCGAGGCGAGGCGGGGCGGGGCCGGGCACGACGGGAAGGGGAAGCCGCGCGGGCCCGGAGCCGCGCCGCACCAGCCCGGCTGCATCCACCGCTCACCAAGCGCCGCGATGGGGCTGGAGACCGAGAAGGCGGATGTCCAGCTCTTCATGGACGACGACTCCTACAGCCGCCACAGCAGCGTCGATTACGCAGACCCCGACAAGTTCGTGGACCCAGGCAGCGACCGAGATCCCCACAGGCTCAACTCGCATCTCAAGGTGGGATTCGAGGATGTGATTGCAGAGCCAGTGTCTACGCACTCCTTTGACAAAGTGTGGATCTGCAGCCACGCTCTATTTGAAATGAGCAAATATGTGATCTACAAGTTCCTGACGGTGTTCCTGGCTATTCCCTTGGCTTTCGCTGCGGGAATTCTCTTTGCCACCCTCAGCTGTCTGCATATCTGGATTATAATGCCTTTTGTAAAGACCTGCCTAATGGTCCTGCCTTCAGTGCAGACAATATGGAAGAGTGTGACAGATGTTGTCATTGCCCCATTGTGTACGAGCATAGGACGCAGCTTCTCTTCTGTCAGCCTGCAACTGAGCCACGATTGAATACTTGGGCCCCAGGTCCAGAGATCTGGATACTTGTTTTTATAACATAAAAGCACTACTGTTCTGTTAATTCCCCAACTGTTCAAATTAAGAAAGCTATTAAGATGGGCAACCACATGTAGAATGTTTATTGGCAGATCTTTTCAAATAATGCTTTTCTAATTAAAAGCCAAGGATTTCGTATCTAACTTTATAATCAGAATTATTCAGCAGGCAACAATTAATTTTAAAGGCAGGCAGTTTTTTCTTTAGTACAAAGGTATGCATTTTATAATGATGAATCTGTAATGATCAAGGGATATTTCTCTCAAACACTACAATAGTTTTGTGTACAACTGCTCGTAAAAATATGGAATTTCCTATTTTTTTACTCTGGAAGTAATACTTTTTAAAACCTTTGCAGATAAAGTCATGGGGATACTTAGAGATAAGATAATACAAAGATCCTACAAAAGTAATGATAGGGGCTCTCAAATAAATGTGAAAATAGATTCATGAAAACATGTTCCTTTAAATAGGGTATTGTTAACTTACAGGTATATTTAACAAGAGGTTTCAATCTACTGTATATTTTGTAGTTATTGTAAATGTTGCCCTAATCAGATTGTTTTAAAGCACACTTTATATTTGTTATCTTGTACTAATATATAGAAGGAGTAAATGTATCTTCCATAAGGAACTTCATTGGTGAGATTGCACTGTCCAGATTACATAAGCATATGCATCTTCTTTGGTAATTGAATGTAAAAGAGAGATATACAAGGCTTTTCTTTCTTACTCTTCCAAGTGAAATCCTGAAATGTTTCATGGCTAATGTTTATCTGGCTGTGATCTTAATACAAACCTAACTGATATTTCATCTAAGAGATTATTTCTGTCTTGTAGTTAAAAATTAATCCTGTATTCTGCATTCTTATTGTTTCTCTTTACCTTCAAGTAATATTGGTGCTATTAAATAACATTTAAAATAATGGCTATTTCTGATACTTAAGTACAATTTCAGCTACAGTAATTCATGTATTAACTTCAGCAAAGTTGTTAACTTATTGGGTCCGTGCTACTGAGCTATGTATATATAAATTAAAAAGTAATAGCTACAAACTTTCAAGATATTATCTAATATAAGTTTTACTGCACAGTATAAAATTATTCTTATTATTTTTGGACTGTAGAGTCCTATTTCAGTGTTATGAGTCACTGTTGTTTTAAAAATCTCTATTCTAAAATAATAGGCCTACATAAAAGCTGTCTATAATGTGAGTGGTTAACTATAATTTACACACCCTAAAAGTGTGTCAATGCTCAAATTTCAGAATTACTATCAGAACTTAGATTAACATTCCTTTAAATAGTTTCATAGATGACAACTCCTCATTCAGTGACAATTAATTTTATTTTCCCAAGTTTCTAAGACTGGTGAATATAAAGGATGATTGAACTGGAATTCTACTGGGGAACCAAGCAAATGAATGATTAAATTATGAAGCTTATATCCTTTTGAAGGTAGCTACAAAGAGATTTTTTCAAAACTGTCTTAGGTCATTGTAGCATCATTAGAAAACACTCTCATGATCATTACAGCATTATTTCTCATTTGACAATATGGATATTACTATGTTAGTCAAAAAGGTCAATCAGTCTCATGACTTTATAGTTATACCTTATATTTAAGATGTTTTTAAAACATATTTGGATATGTCATTTGAGCAAAAGTATTTGATTAATAAAATATCTATTTAAATAAATCATGGCTTCTATCTTTTCAAATAGCAAGTTTTTTCAAATTGGCAAGTTTTAAAGCCAAAATATACATACATAGTCACATAAAAAAAAACCTATCAACTTGTAACAAGTAGACTATATGATTTTCTTATTTCTGAATAGCATTGATCATCTTCAAAATCACTTTTTATTGAGATTTGTCATTAACTATTTTATTTCAGAGACTGAAATTTTGTACCAAGTGGACCTAGGTTTCATGTACAAATATGTTGGTTCTTTTATTTGTGAGTGGGGAAGAGGTGGGTGATGGTGGGACTTTCCCAGTATCTATAATAAACTTTTTAAAACTTATAAAGTGTGTTTATTGCTTTTATTACATATCAAGTTCATCAATAAAGAACCTTTTCAAACTAATTTTTCCTTATTAAAAACTTATAATAGGTAAACATACATGAGTTATTGCTTATTCTGGAATTTATTTGTAAAAAATTACATGATTGGTAATTTTTTTTATTTTCCCAGCACTTAAG EMBV3_30339 GAAGATGATGAAGGGGCTCAGTGGAGTTGTGCTGCCTGTACTTTTTTGAACCATCCAGCC Gene GeneID:540203|MAP3K7IP2:XM_002690317:8_cdna Constitutive 0 NULL GeneID:540203 9 GENE MAP3K7IP2 MAP3K7IP2 mitogen-activated protein kinase kinase kinase 7 interacting protein 2 EMBV3_09111 AGTTCCTGGCCCCAGAAGTCGTCAATTATGAGTTTGTCTCGTTCCCGACGGACATGTGGA Gene GeneID:526379|MYLK3:XM_002694870:847_cdna Constitutive 0 NULL GeneID:526379 18 GENE MYLK3 NULL myosin light chain kinase 3 EMBV3_04766 TGACAAAGCAAGGAGGTTGGTAATGAAACAAACACAAAGCTTTCAACCTTGTGGATGGAA Gene GeneID:540416|KCND2:XM_002686905:111_cdna Constitutive 0 NULL GeneID:540416 4 GENE KCND2 NULL potassium voltage-gated channel, Shal-related subfamily, member 2 EMBV3_34996 CCCATCACTTCATGGGAAATAGATGGGGAAACAGTGTCAGACTTTATTTTTTTGGGCTCC Gene GeneID:512527|CWC25:NM_001105359:97_cdna Constitutive 2 NULL GeneID:512527 19 GENE CWC25 CCDC49 MGC143049 CWC25 spliceosome-associated protein homolog (S. cerevisiae) EMBV3_36650 TTTAGAGCCCATACTCCACAACAAGAGGAGCCACCACCATGAGAATCCTGCTCGCTGCAA Gene BVT0102_205526 + 0 NULL GK000015.2:54588290-54616101 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39848 TTCATTCAGGAATTGAAGTATATGGCAGAGATTCTCTGTGGGAAAGAGATTCCTCGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17900 GGACACCTACTTTGTGCTTGACACTGTATCAGGCCGTAGGGACATAAAGAAGAAAAAGTA Gene BVV0102_186382 - 0 NULL GK000010.2:11488432-11495133 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012599 TCONS_00012595 TCONS_00012598 TCONS_00012597 1 XLOC_007894 Coding TCONS_00012597 XLOC_007894 Coding Coding ERO1L 10:11438272-11491349 = TSS9526 4915 1 TCONS_00012597_5 468 0.197558494404883 16 0.907698394754691 5.95313008856624e-05 4.71264556301955e-05 9.4804129795989e-12 4.97627670756391e-13 5.45061077553431e-07 1.65663533750292e-12 3.40148896221638e-05 9.52205855650583e-12 0.000166889848877374 1.52795125695665e-10 9.19632238832097e-05 9.53283280490459e-06 2.89752673041033e-08 1.40124005606405e-07 2.26503393458653e-12 0.00636608064113287 0.00331528237831738 0.00683522083678854 1.96270533643493e-07 5.14926863102382e-06 0.000107018358867025 0.0030691490865214 0.00297396748796695 0.00479171619370456 3.71399111812753e-05 4.2984103699328e-05 1.96263895565823e-05 0.000466817268236596 0.00037763199477109 0.000737604464053805 NM_001103348.1 ERO1L Bos taurus ERO1-like (S. cerevisiae) (ERO1L), mRNA. 0.0 3593 99.90 0.406103763987792 NM_014584.1 ERO1L Homo sapiens ERO1-like (S. cerevisiae) (ERO1L), mRNA. 0.0 2663 88.38 0.419735503560529 TCONS_00012597_5 sp|A5PJN2|ERO1A_BOVIN ERO1A_BOVIN ERO1-like protein alpha; 0.0 972 100.00 0.997863247863248 1 coding 0 0 0 0 1.18843435918539 0.062023594222167 -0.0663848529117931 0.202782167914105 AGCGGGCCTCAGGTCCCGGGCGGCCCGCGCGGGCGCCCCGGCACGTCCGCAGGCTGCAGCGAGAGGTGGCGGCTTCTGAGAGGAAGGAGAGACGAGGGCGGGCCTGGGAGGCGGCCGGGAGGTGGGGCGCGGCCGGGGGCTGGCCCGCGCGGGCTTCATCTGCGGACGCACGGCCTGCTCGCGAGCGCTGGGGATTCCGAGGCGCGGCACGACAAGCGGCTGGAGCGGCTATGGGCCGCCGCTGGGGCTTCCTGATCGGCTTCTTGGTCGCCGTGGGGTTGCTGGGCTTGGGCCACGGCGAGCAGCAACCCTCAGAGACGGCGGCGCAGAGGTGCTTCTGCCAGGTTAGTGGTTACTTGGATGATTGTACCTGTGATGTTGAAACCATTGATAAATTTAATAACTACAGGCTTTTCCCAAGACTTCAAAAACTCCTGGAAAGTGACTACTTTAGATATTACAAGGTAAACCTGAAAAGGCCATGTCCTTTCTGGAATGATATCAACCAGTGTGGAAGAAGGGATTGTGCCGTCAAGCCTTGTCACTCAGATGAAGTTCCTGATGGAATTAAGTCTGCAAGCTACAAGTATTCTGAAGAAGCCAATAATCTCATTGAAGAATGTGAGCAAGCTGAACGACTTGGAGCTGTGGATGAATCTCTGAGTGAGGAAACACAGAAGGCTGTTCTTCAGTGGACCAAGCATGATGATTCCTCAGACAACTTCTGTGAAGTTGATGATATACAGTCTCCTGATGCTGAGTATGTCGATTTGCTCCTTAATCCCGAGCGCTATACGGGTTACAAAGGACCAGATGCTTGGAAGATATGGAATGTCATCTATGAAGAAAACTGTTTTAAGCCACAGACAATTAAAAGACCTTTAAATCCTTTGGCTTCTGGTCAAGGTAAAAGTGAAGAGAATACTTTTTACAGTTGGCTAGAAGGTCTCTGTGTAGAGAAAAGAGCATTCTACAGACTTATATCTGGCCTCCATGCAAGCATTAATGTGCATTTGAGTGCACGGTATCTTCTACAAGATACGTGGTTGGAAAAAAAATGGGGACACAACATTACAGAATTTCAACAGCGATTTGATGGAATATTAACTGAAGGAGAAGGTCCACGAAGGCTTAAGAACTTGTATTTTCTCTACTTAATAGAATTAAGGGCTTTGTCTAAAGTGGTTCCATTCTTTGAGCGCCCAGATTTTCAACTCTTCACTGGAAATAAAGATCAGGATGCAGAAAACAAAATGTTACTTCTGGAAATACTTCATGAAATCAAGTCATTTCCTTTGCATTTTGATGAGAATTCATTTTTTGCTGGGAATAAAAAAGAAGCAAACAAACTAAAGGAGGATTTTCGACTGCATTTTAGAAATATTTCAAGAATCATGGATTGTGTTGGTTGTTTGAAATGTCGACTGTGGGGAAAGCTTCAGACTCAGGGTTTGGGCACTGCTCTGAAGATCTTGTTTTCTGAGAAATTGATTGCAAATATGCCAGAAAGTGGACCCAGTTATGAATTCCATCTAACCAGACAAGAAATAGTATCATTATTTAATGCATTTGGAAGAATTTCAACAAGTGTGAAAGAATTAGAAAACTTCAGGAACTTGTTACAAAATATTCATTAAAGAAAGCAAGCTGAAAAGTGCCTGTTTCTGGACAGTGGAGGCCAAAGAATGGAATTGCATTCAAAGGCATAAATAGCAATGACAGTCTTAAGTCAAATGTTTTATATAAAGCTGCTTTTGTAAAAGGGAATTATGTTGTTTTAAATAACAATTTTTTAAATTGTGTTAAATCTATGTGTAATATTATTGTGAGTAAAACTTTGATAATGTGGTATACCTTTAATGTTTAATATTAAGTAAAATCATCAGGATTATCAAATTCACATATGGTAAATCTAAGTAAATGATGTTTTAAGTCTCTCAAACTAGAATTTTGTGTAAGAAGACATAATATAAATTAAACTATGGCCAATGTGAAAAGTGTTTATAAGAGAATGTTATGACCCATTATTAATAGCCTAAATGTTCAACATTTAGGGTGAACAGATTTAGTAAATAAAATACAGAAGTGAAGTGAAGTGAAGTCACTCGGTCATGTCCGACTCTTTGCGACCCCATGGACTGTAGCCTACTATGCTCCTCCGTCCATGACATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCTTCTCCAGAGGATCTCCCTGACCCAGGGATCGAACCCAGATCTCCCGCACTGTAGGCAAACGCTTTACCGTCTGAGCCACCAGGGAAGTAAAAAAAAAAAAAATACAGAATGCCTAGTTAAATTTGAATTTCAGATATACAACAGTTTTTTTATATAAGTATGTTGCATGTAATATGGGACAAACATATACCAAAAAATTATTCCTCCTTTCAAATTCAGATTTACCTGGGAGTCCTGTGTTTTATTTGGCAACCCTACAATACATTGGTATGAAACAAATCACTTTTAGAATTATTTTGCTATTTTGATTGGCTTATTTTGGTGTGTAGAAAGATACAATGATAATGCAAGGGTGTAAGGGATTTCTAAACAGTGTGAAAAGTTGAATAGATTTATATATTTATTCTCATAGTACTTTCCCTGATTCTGAATAAAAATTTGGGGAAACTTTTTATTTTTATATAATTTCAAATTTATAGAAATGTTTTCAGGATAGTATCAATACAAAGAACTCTTTTACCAGATTCCTTAATTGTTCATATTTGCTTTCTTGCTCATGCTATCTCTGTATATATACACACATATACTATTTTTTTCTCTTGAAGAGTCAGTTATAGGCATCATGTCCTTTGAACCATGTGTAATATGAATAATGTTTCAATGATTTTTTTTTCAGGAAAAATATCTGCAACTATATACTACGATAAGCCTTAGAATAAGGAATCATTTTGAGTTCCAATCTAAAATTCTTTTTTGAATTTTGTTACCCTTTTTATGCTGTATAGTTATAGGCATAAAATTTGGGGGTTTTGCACGTGATATTTCTTTCTTTCTTCTCCCCATAACTAAACTGTAATTTTTAGAAGTCTTCATTAAGGGAAGATCTTCAGTGATAAAAATATTTGAAGGGGTTTAGGAATTTGTAGCACATGGTAATTGTAGGAAAAAAGGAAGTGTATACCTCAAAGTTATGGGCTCTTTCTGTATGTCTTAGCAGGTATATCAGGTTGAGATGTAACATTATTCATAAAGCAGGGTTTATTTACATAATGGCTTAGAAATGCTACTTAACACTACTGTATACTTTTTCTTCTTTATGTCCCTACGGCCTGATACAGTGTCAAGCACATAGTAGGTGTCCAATAAATATTTTTTGAGTGAATGTATGAAAATGTATTCAATATATTTAAATTAATTATCACAGAACTAAGTTTAATAATATATGTCCTATTTCCTTTCCCCCCTAATTTGAATAGGGCAGGAAAAGAAAGATATTAACCTACTATGAAGTCAGTATTCTTAGAGACTCAAAAGACTATGAAATGAGCACCAAATATAGAAGTGTAAGGACATTTGTGGTACTCTGAAAATTTGGTAGAGGGGTTTAAATTTATTTTAAAATTATTTTGCCTGTGTGACTCTCTCTCATCTTATGCCCCTACTCTCTCTCTTTTTTTAACAGCCAAACTTTTGGAAAGAATATTCCTGTCTTCACTTTGTCCCCCTCCACTTGCTCCCTTAACTGAAATTTGTCTTTTTTCCTTAGTAGCTAACAATCTTGTCTTTTGAAGTCTAAATCCCAATTTTAAATCTATGGTTTGGTTCACAAGCCGTTTCTTACTTTTTTTCTGCATTTGACACTGTTGACAGCTCCTTCTTTAAAAATCTGTTTTCCACTAGGTTTCTTGTATTTCCCTCACTTCTGAGTGCCTCTTTTCATGTATTCTTTAAGTTATTCCTTAGGCTTTTATTCCTGCTGTCTTCAGCACTACCACTTCTCACTCTTGAGTCCTTCCAATTCAGTGATCTCTTAAATCCGTACCTTTAGCCCAAATTTCTCAGACCATCTTCATTCTACGCATCTTCACTTGGTTGTCCCACAGACACCTGCGTGTATCTTAAAAAGTTATTCTGCCCCAAACCTACTCTTATGCCTATGCTCCTTCCTTTGGTTAATTTTAGAACCATCATCATCTACATCATCTCTAGGCTAACCCTTCCACTCCCCTGTCCAGCCAGTGTCTAATCTCTATGGATTTTATTTCCATATCTCTGATATATCACTGTGTTTCCATTTTCATTGCTCTTCCCTAAAGTACAAACCTTTTTACTTGTACCCAACCTGTCTCCTCTCTTTTGCTTCACAGTGTTACCAAAGTGGGCTTTCTAGAAGCACTCTCACAATGTTACTCCCTGCTTAACACACAGTGAATTCATGAACCTTTAGGAGGAAACCACACCTCTTTCCTTGGTGAACAAAGTACTCTGATAGGGGTCTTTCTGTTTCCCCCAACCTCATGTTCTGCTAAAACAGACTTAGAATTCTTCAGATGCAGCATCGTCAGGCCTCCACACCTTGGTGCCTGCTGTTCTCTATCAAGTGCCCTAGCCATCCTTCCCCACCTGGGAAATTTCTGTGTATCCTTGCAGGCCCAGCATAGCGATCGCTTCTGTGAATTCGCCCTTGCTCCATCCAAGGAGGATCATCTAAGTTCTTCTTTTGTGTCACCACTGTAATTACAACCTACCTCTACTGCGTCACTTATTGTACTGTATTGTTTTTGTTTTTTAAAAATTCCTTTACTAGAATGTGAGCTCCTTAAGAGCAGGAAAAGAAACTTCCGTGTTTGCATCTCCACGGCATAGTTTTTGGCATATGAACACTTAATAAATGTTTGTTGAATAAACTGCTTTTAAAATGACAAC EMBV3_39571 CTCATTTGGACCCACGCTCCAATTCAGGAGCAGTCTGGTAACTGGATCTCCTGGGAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02437 AAGACCCTCCGGATAGAATTTGCCACCCTGAGGAATGAAAACCAAGCGGCGTGTGGGTAC Gene GeneID:100139805|LOC100139805:XM_002694886:905_cdna Constitutive 0 NULL GeneID:100139805 18 GENE LOC100139805 NULL hypothetical protein LOC100139805 EMBV3_19455 CTCCCAAGTGGGCCCCTCTCTCGTCCCAGCTACTTAGGCTATTACTTGGTCATTTCCTAT Gene GeneID:100336406|LOC100336406:XM_002690536:581_cdna Constitutive 0 NULL GeneID:100336406 10 GENE LOC100336406 NULL GMP reductase 1-like EMBV3_15981 CCGGTGGCACCAGCGTGACCTGTGGAAAGTCCACTTCACAACCCCCATCTTCCAGCCAGA Gene GeneID:505899|ARSE:NM_001097988:2_cdna Constitutive 0 NULL GeneID:505899 X GENE ARSE MGC155058 arylsulfatase E (chondrodysplasia punctata 1) EMBV3_03793 AAACAAAGTTGGCAATTATTCCTGGTGGAGGGGGAACGCAGCGATTGCCGCGTGCCATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35248 ACATGTGCGTCTGCTGGGGGTCTATTTGCCTTCGTCCGCAGCCTTTCCCACTCAGAATTC Gene BVV0102_226827 + 0 NULL GK000003.2:121309421-121398873 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19679 TGCGCGTTTAAGAGCAGTTAGGAAGCACCTCTGGTTTGAATGGCACCATCTTCCTTTGGG Gene BVV0102_197263 + 0 NULL GK000013.2:34103548-34524931 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02560 CCACAAACGTGAGACATCTCAGACCTTTCCTGATGCTATAGCCTTTGTTTTCCAGTGGCC Gene GeneID:519269|RRAS2:NM_001099010:128_cdna Constitutive 0 NULL GeneID:519269 15 GENE RRAS2 MGC148978 related RAS viral (r-ras) oncogene homolog 2 EMBV3_01731 TTGCCTGGGGTCCCACTGTCCACGCTCAAGATTCTTCTTACCCCAGAAAAACAAGATGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42030 GCTGTATACATAGTGCTGTTTAAACGCTAAATAAGGCAGCAGCTGTTGTGTATTCGGGCT Gene GeneID:537817|TBC1D9:XM_002694365:151_cdna Constitutive 2 NULL GeneID:537817 17 GENE TBC1D9 NULL TBC1 domain family, member 9 (with GRAM domain) EMBV3_28925 GAATTTCCATACCTGTTTATGAGTTTCCATAGGAGTTGTGAGTGGAGCCGAAGCTTTGAC Gene BVT0102_101698 - 1 EMBV3_30964 GK000013.2:74088252-74092648 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043874 1 XLOC_026058 Coding TCONS_00043874 XLOC_026058 Coding Coding STK4 13:74088359-74183088 j TSS32361 7277 1 TCONS_00043874_5 411 0.248316613989281 12 0.923306730850435 7.02720899312442e-05 6.82107186276619e-06 1.34026584750722e-16 9.85583342034491e-05 2.01710229634344e-05 0.000211049767630891 7.73644055110453e-05 7.51499650715205e-06 4.21667517381821e-26 1.42627231293823e-31 7.41814736844921e-166 2.14248038247451e-05 9.37191862408083e-62 1.16959374994262e-25 2.73150942790367e-72 3.04335585104204e-68 4.05410794772407e-61 5.55672086676519e-66 8.60093423359579e-05 1.09998784769717e-05 1.21987690984721e-51 3.83341545202072e-93 3.76202853229739e-55 8.99224037540754e-72 1.51031066753112e-40 1.16114703240689e-63 0.000117371188652162 8.02735391333005e-94 8.89431565187653e-67 1.97148315523555e-92 NM_001015602.1 STK4 Bos taurus serine/threonine kinase 4 (STK4), mRNA. 0.0 3315 99.78 0.253813384636526 XM_005260530.1 STK4 PREDICTED: Homo sapiens serine/threonine kinase 4 (STK4), 0.0 2890 81.76 0.404012642572489 TCONS_00043874_5 sp|Q5E9L6|STK4_BOVIN STK4_BOVIN Serine/threonine-protein kinase 4; 0.0 862 100.00 0.997566909975669 3 coding 0 0 0 0 0.10429246408398 0.896206544419388 0.0125661300870878 0.793897244529025 GCAGCAGCGCTGGGCATCTTGGCGTGGTATCGAGAACCCTGCAGGATATGACACCTGGAGTTGTGGCAGCCATTTTGCATCTGAGTCAATAAGCACAAGGACGAAAAGCCAACATGCTGAATTGGGCCGGGGGGAATGATGAAATCGACCTTGTTGTGTCAATCAACCCTACAACCGACTCCTGGACTTCTTAGTAAAAAACAAGAAATGTGATATGGTTGGGCCACTCAAATGGCTGTTCTCTTGTTCTCTGTACATCCCCTGGCCAAACAGAGCCTGCTTCACCTAACACCCTACTTACATGACTGACCTTCCTATGTACCTGTCCCAAGCCCCAGCTAATGACAGCTTACCAAAGGGGTGGTGAGTGGCTAGCACCTTTGCTGGTTTCCTTGGTAACTAATGAGCCCACCTGAGATCAATTCCTCTATAACTGATAATTCCCCGTTTCCCATTTGGGGAGCAAAGACTGCCACTGTGTCCTGGCTGCCATGCACTGCACATGGGGTTTTGTAGATGGCATACCAGAGGCTGCTTTGAGTAACTTTCTCTACAAGCAAACTGGGATTTTTCCATTTTCTTAATACTCATTGATGGTGGTAGCAACTGAGGATTTATGAATTTCCATACCTGTTTATGAGTTTCCATAGGAGTTGTGAGTGGAGCCGAAGCTTTGACTCTCATGCCCAAGGAGAGGGTCCAAGTGGTTGTCCAGTTTGGTAGTGCAGGCTCTGGAATTCTATCCTGGAAAAGGAAATGGCAACCCACTCCAGTATTCGTGCTTAGAAAATCCCATGGACAGAGGAGCGTGGTGGACTATCCATCTGGATTTAAATCCCCAAACCGATACTTTTAGCTATGTGAGCTCACCTCTCCGGCCTTATGAGCGTAATATTACCTGCCATAAAGTTTTAAAACTACTAAGTGAGTTAGTGGTAGTAGTAGTAATTTAGTTGCTAAGTTGTGTCCGACTCTTGTGACCCCATAGACAGTAGCCTGCCAGGCTCCTCTGTCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTTCCATTTTCAGTTAGTAGTAGAGTATCGAGAACATGATAAGCAGTGGAAAATAATAGATAAGACTGGGATAGTTACAGCCTTGATATAAGGATTAAATAATATAAAATGGCAAGTACATGGTAAAAGCTTAATGTGTGCTAAATCGCTTCAGTCGTGTCCAGCTCTTTGTGACCCTATGGATTGTAGCTTGCCGGGCTCCCATGGTCATGGGATTCTCCAAGCAGGACTACTGGAGTGGGTTGCCATTCGCTCCTTCAGAGGATCTTCACCCAGAGATGTAACCCGAGTCTCTCATGTCTCCTGCACTGGCAGGCAGGGTTTTTTTTACCACTAGCGCCACCTGGGAAGCTCCAAGAGCTTAATAAATCTTGGCTATTTTTATGTTCACAAGCTGACTCAAAGGCAGCTGAAAAAGTTGGATGAAGATAGTTTAACTAAACAACCGGAAGAAGTGTTTGATGTCTTAGAGAAACTTGGAGAAGGGTCCTATGGCAGCGTGTACAAAGCTATTCATAAAGAGACCGGTCAGATTGTTGCTATTAAGCAAGTTCCTGTGGAATCAGACCTGCAGGAGATAATCAAAGAAATCTCTATCATGCAGCAATGTGACAGCCCTCATGTAGTCAAATATTACGGCAGTTACTTTAAGAACACAGACTTGTGGATCGTGATGGAGTACTGTGGGGCTGGTTCTGTATCTGATATTATTCGATTACGAAATAAAACGTTAACAGAAGATGAAATAGCTACAATATTACAGTCAACACTTAAGGGACTGGAATATCTTCATTTTATGAGAAAAATACACCGAGATATCAAAGCAGGAAATATTTTGCTTAATACAGAAGGTCATGCAAAACTTGCAGATTTTGGGGTAGCAGGTCAACTTACAGATACCATGGCCAAGCGAAATACAGTGATAGGAACACCTTTTTGGATGGCTCCAGAAGTGATCCAGGAAATTGGGTACAACTGTGTAGCAGACATCTGGTCATTGGGAATAACAGCCATAGAAATGGCTGAAGGAAAGCCTCCATATGCTGATATCCATCCAATGAGGGCCATCTTCATGATTCCTACCAACCCACCCCCCACATTCCGAAAGCCGGAACTGTGGTCAGATAGCTTCATGGATTTTGTGAAGCAGTGTCTTGTCAAGAGCCCCGAGCAGAGAGCCACAGCCACTCAACTCCTCCAGCACCCGTTTGTCAAGAGTGCCAAAGGAGTGTCCATACTGCGGGACTTGATTAATGAAGCCATGGACGTGAAGCTGAAACGCCAGGAGGCCCAGCAGCGGGAGGTGGACCAGGAGGAGGAAGAAAACTCTGAGGAGGATGAGCTAGATTCTGGCACGATGGTCCGAGCAGCAGGGGATGAGATGGGCACTGTCCGAGTAGCCAGCAGCATGAGTGACGGGGCCAATACGATGATTGAGCACGATGACACGTTGCCGTCCCAGCTGGGCACCATGGTGATCAACACGGAGGACGAGGAAGAAGAAGGCACGATGAAAAGAAGGGACGAGACCATGCAGCCTGCCAGACCATCGTTCCTTGAATATTTCGAACAAAAAGAAAAGGAAAATCAGATCAACAGCTTCGGCAAGAGTGTCCCTGGCCCATTGCAGAACTCCTCAGATTGGAAAGTTCCCCAGGATGGAGACTATGAATTCCTGAAGAGTTGGACGGTGGAAGACCTTCAGAAGAGGCTCCTGGCCCTGGACCCCATGATGGAGCAGGAGATTGAGGAGATCCGGCAGAAGTACCAGTCGAAGCGGCAGCCCATCCTGGACGCCATTGAGGCCAAGAAGCGGCGGCAGCAGAACTTCTGAGGGCAGCCTGGCCCCAGGCCGCCAGTGAACTCTGGCTCACTCGCCCCTCCAGCTCGCCTCCCTCCTTTCTCCAGAGCCCCCTCTGTGAACTCAGGAACCAAGAAAGTGCGCCACTGGCCAGGGCTGCGGAGCCAGTCGGCACGCTGCCCCGCTGTGTGTATTTGAAGTTGGACAGGTATATATATATCATTTCCCAGGACTCATGTGGGCGCTTTGAACCTCAGACTTTCCCACCCCAGAACCAGAGACTCCTCGTCGAGTGAGAGCTGGGAAAGTGTCACGTGGTCTCTTTGTTTTTCTTCTCCCAGTAGCTTTCAGTGGTTCTTTCTGGAAGACTTTTTTTAAAAAAATATATAAATATGCACATATATATATAAATTATAACTAGATTCCCCACGTGGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAAACAGTTGCCTCTTTTCTGTAAGATAACGGTACTGTGGAACACGAGGGAGGAGGACACCAGGAGGCTGCGGGGGCCCTCCAGCCCCTGGAGCCGGCCTCACCCTCCGGCTGGGCTGTGCTGAACAGATGAGGTCGGGGTCAGCTCCTTCACCATGCTTTCAGCCTTACGCGGGCCACCCCTGGCTTCCAGAGCTATTAGTGATGTCCTGGGAAAGACAATTTGCATTGCCTTTCAGAGTCTCAGGAGAAGCCTGGCGCCCTCCTTGCGAGCTTGGCCTTTGCAGTTTCAACACCCTTCATCCACCTCCACTCTCCCAACTGCCTAGAGTCACAGCACAGACACTGCCCAGTGCCTTAAGAGGAGACGTGATCAAGCGAGGGCACAGGCCTACCCGGAACTCCCAGCAAAGTGGGGCTGCATTCAGTCCACAAAAGGGGAAAAGGCTTTCCAAGTTCTCGTCATTCATGTGAAGAGGACACCCGTGGCATTTTGCTCCATGTTCCTTGCAGACAGGGGTAGGGGGCGTTGCTTTTGTGACCCACATTCAAATATGTGACTGTTTTCTTTTCTCATTTTACTGCTTGGGGTCTGGAAAGGGTAAATGAATATCAGACTAAGATTTGTCCTCCAGGAGACTCAACCCAGATGTGTAGGATGCCAAAACTGGAAGGGACCATATAGATACCACCTGGCCTGATGGCGGCCCAGAGCAGGGAAGTGACATGGCCCAAATCACGAAGCAAATGAAGCGCTGGGACTGGATGGTGGGGCCCCTCACTCCTGCTTCACTGGGCTAAGCAGCCCCTTCTCTGAAGGAAGACGCTCGTGTCCGTTTTGGTGAAGTTCCAAGGAACCCTGCTCACGGGAACTTGCCTGGCTTCGTCTCTTCAGTAGGCGGCTGGCTGTGAAGAGATTCCCACGGGGAGCCAAGGTCATTCTGTTGCAGCCATCCCACAAGCTCTCCTGCATCTGCCGGATAGCACATGAGCATCACACAGGTAGACGCAGAGCCGAAAGCAGGTCAGAGGGTTTTGCAACAGACAGCGCTGAGCCATCCCTCTGCAGCTTTGGCTCTAGGCCACGTGTCACTTAGTCACATGGCCGAGAGCAGACAGTTGCGAAAGGCGACTGCCTTTTTATTTTTTAGAACCTCTTCCCCTCAGATAGGGGAGCCGTGACTGGGTTGCACCTAAGGATACTGTAATTTGACTCCATAGTTGCTCTTGCTGCCCAAAGCTGGGAATCAGTGGAGAGCCAGGGATGTTCCTCTTCTGTGGCCAGATTCTGTTCTTTGCAATGACAGCAAGTTATTGAAAAGGCAAGAGGCCATTGCTGGTCTGCAGGGCTTGGCCAGTTATGCAGCTACTTGGCAGATACAGAGAACAGAGGACAATTTGAGGATCCTGCTATAATAATAAAGGGCAGCTAGCAATCATGACCACTTACTATATGCCAGGCACTGAGCTAGGTAGGTAGGCTCTTTATGTCAGCTCCAACCTCCCCAATAACTCTGTGAATTAAGTATTTTATCTCCATTTCATAGAGGATGAAGCAAGTTCAGAGAGAAAAAAAGTTCTTTCCATAGGTGGTACAGCTAGTAAGTGATAGAATCAGGATTCATAGCATCACCATGTAGGACCAGTATTTACAAGGAAGAGGAAAACCACAAGTCTTTTTAAAAATTTCATTTTATTCACATATAGTTGATTTACAGTGTTTTGTTAGTTCTGCTGTATAGTAAAGTGACTCCGTTATACATCCTTTTTCATACTCTTTCCCACTGTATTTTATTGCAGGATATTGAATATAGTTCCCTGTGCTATACAGTGAGACCTTGTTGTTTATCCAACAAGCCTTCTTAAAAAAAAGGAAGTGACCACTTTTCTTGCACAGACTAAAAAACCCAGGCTGGCATTTTTAGGTTGGGAAACCACTGAATCGGTCAAGTCTGACAGTCAAGTGAGTTAAAAAACAAAGTATGGAGCATGAATTTCCCTATACCATCTGCTGTGCTAATTAACAGTCCTGCCTCAGTTTCCCTCTCTCCCTCCCTCCCTCTCTCTCTCTCTGTTTTTTAAAGGATTTTGCACTTGGCCAGACAGGAGAGGAATGCCCATTTTCTCCCTTCCTAAGCTAGATCCAAGTAAAAGAAGGTTCAGTTTTTCCCCATAAATATTCTTGGGTGATGAGTCTTGATCTGAAGTTTATTTTGTTTCAGTTCCTTGTGTGCATCCACCATGCTGGTCCAAAAAGTGCATTGCTCTCCAGTTGAGCTAGACGGAGCCCTTTGGCCAGAAGTCAATGTATTTTGGATGAGATAGATTTTCTGACAAGGTGTGTTTGTTTTCTTATGCCAGAAGGCAGAGAAGTCAATCCTAGTCATTTTTCTCCTTGGATACTAAATTCACATAGGTCAGCTGGCTTCCTGTAGAGCCCTGAGCTTCATCATTTGTGACTCCAGCTTCCACGGGACTCTGAGCCTCTCACTTGTTCTCCCCTAATAAACAATGACCCAGACCTAACTGTGTCTTTTAAAAATCTCAGATCCTCCAGGAACATCTTTATTGCTTCCTCATCAGTAATTTTGCAGCAAATTTCTATTTTTGTTTTTCCTTGTCTGTTCTCCCAGCCACCAGTTGATAGACAGATGAACTGGTGGATAAATGTTTGGTGTGATGGATAGATAGATACAGACGACAGACAGAACCAGTACTCTGAAGCAACTTAAGAACTATGGCCTTGATTTCTTGAAGCTGTAGGTTCTGATCCAGGAAACATTTATTTAGCACCTGCTGCCAGAAATTTATTATACCATTTCAAACTCAATAGCACTTACTGGTATCAGGAATGAGAGAGGTGACACCAGTCTAGACCCTACAGATATTAAAAGGCTAATAACAATTTTATGAACAACTTAAATAGACAAATTCCTTGAAAGATACAAAGTACCAAATCTCACTCAAGGAGAAGGAGATAATCTGAACAGCCCAACATCTACTAAAACTTAATATCTCTGAGAGATACAGGTATCTTTGTCCTCATTTTACAGAAAAGGAAACCAAGGCTCCAAGAGGCAAAGTCTGTTGCTCAAGGTCAGGTAACTAGCATACAGCAGAGCCAGAGTTCATATCCAGGTCTTTTCTTCCAGTGCCCTTTCTAGCATACCATGTTGCCTCTAAAGACTGCAGCTCCTTTTTTTTACCTGAAAATTGTTCCTGCCCAGTGCACATCCTATCTGCCATCTTTCTTAAGCACTGTGTCTGTGTTTTCATCAGGATTATAGTCATTGTATTTGGAATTGATGTACTTTTTTGTGTTTGGGGTGGGGGGCGGGGCGGGAAGAAAATCTCTTCCACCAGCTTGCACTCGGACCAACTTGGAAAAAAAAAGCTTAAATGCTGTTGCAGACGTACAACTTAAAAATGTGAAGTTTGTAGCTTTAACTTTTTGTAACAAAAACTAATAACACTGGCTTAAGTGCTGACTTGAAATGCTATTTTATAAAGTTTGGATGTAAATAATCAATTGAGGTCAGCAGTTTGTATATGTATGAGACATAGCTTCCTCCATTGCCCTTTTTTTTTTTTAAATTGAGATGCTTCCTATGTGCTTTTATGTTAGAATTGTTCTCCCTCCTTCCTCCTTCCTCCACTTTGTCACCTTTGTTTTAAATAAACTGTCCTTTGGATCAGAGACTGTTCTCTTTTTAAAAACAACATCCTCCATCTATAACCTGGATGATGGTATTGTGAACCATTGACTCTGTGCTGTGTTTATTCCAGAATCCAAAGCCAGGGGAGAGGCAGGTGGCGTAGGGATTAAATTTTTGTTGGGACACCTGCTACGTGCCAGGTACTGAGCTAATTGTCAGGGGTTTAAAGATGGAACCAGACACAGCTCTGGCAGGCCACTCAGGGAGTCAGTCCAGCCCACAAGCACACAACATTGAAAATATTATGG EMBV3_21759 GCCACTACCTCGAATGCTTCTGTGATCGTGTCTCACTGACTACTTATGGCTTCGTTCTTT Gene BVT0102_012902 + 1 EMBV3_05155 GK000004.2:47228659-47306856 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183884 TCONS_00183885 1 XLOC_111227 NonCoding TCONS_00183885 XLOC_111227 NonCoding NonCoding - 4:47292177-47294901 - TSS137060 1444 2 TCONS_00183885_4 71 0.263850415512465 2 0.470437017994859 1.10569996067789e-05 0.000180926002033523 0.000165290089565213 1.82777276829347e-12 2.05577465390639e-05 2.14690170557841e-05 2.52030830867612e-05 6.37464794405964e-06 8.0151771447763e-11 0 6.58074389116202e-11 0 0 1.30268597146358e-05 4.92355496682497e-11 0 0 0 3.4214352574657e-09 1.99153075990841e-05 3.04154885002652e-40 0 0 0 0.000625483973663934 2.97356908113394e-10 7.35929594209206e-05 0 1.93971743067252e-10 0 0 noncoding AGGCGGGGGCTCCACCGTGGGGAAGGAAAGGAAGGTGTTTCTGGGATCTGGGTGCTTATGACTCTCAGTGTTCTCAGCTCAGGGTGTTTTCATCTCCCTAATGAGCACCAGCACCTGCTAGCAAAGCAGTCAGCTTGCCTGTGGGGAAAAAAAGGATGGGATGAATGAATGCTCTGTGCTTTGTTTGGGGGAGAGAAGAGCCCCAACCCTTGATGGATCCCTAGGGCAAAGGCCTGAGAAGAGGGGCTGTGATACTGAGGGGGCCAGCACCAGTGTCTCTGCAGTGAGAGCCCCCCCTAAAGACAATGGGTAACCGGAGACCAACAGGGCCCGTTTCCCAGTGAAGAGCTCTATGGTAAAGCTGGCCCATGGAACCACCCACCAACTTAGACTGAGGCCTGAGGCAGCAACCTGAGAGCTCAGAGGCCCTGGCCTCTCGTGGCTGGAGGTCTCCTGGGCTTCATGGCAGGGGGCCCCATCACACAGGTCTGGACCCCTTGAGTCTTACCAGTGCAGCTAGACTCTGGTAAAACTGAAAAGAAGAAAGGTTTTATTCAATGCCCTCAGTTTTGGATGTTTCTCCAACAGATTTCCAGGAGAGATTTTTTTTTCCTTTTTTTTTATGTGTGTTCCCCATCATGAACCCTCCTCCCACCTCCCTCCCCATCCCATCCCTCTGGGTCATCCCAGTGCACCCAGAAGAGAATATTCCAGCAAACAGTTATTCCCGGAAGTTGAACATTGACATAAGAGACATGGAGATGGTCCAATGACGATGGTTATGTTAAATCAAGATGGGGGAAGTGTGCCAATGAGTAGGTGGAAAGGCAGAGAGAAGCTGGAGACAGGAGCTGACACACCGAGGAGAGCCGGAGGCCCCAGGAGAGAGGCAGGGACAGCCTGAGACGCCAGCACCCCAGCTCCACGCCAAGGGATCTAGAGTCTTCATTGCCAGCCTCAGTGTCTGGAAGTTGTGTGTTGAATCCTTATGTCCTGACAGTAGCCCCTGTTAAACTCAACTAGTCTGAGTACTTCTGTTCCTTGCAACTAAATAGTCCCTAAGACAATGTGATTGGGCAAGATGAGGGAATAGATGTCTAAGACCCCCAAAGATAAGCATATTGCAAAGAGAGTTGTCAGGATGTCTGTGATTTACTTTGAAATACTTCAGCAAGTAGGGTCAGTCCTATCGTGTGTGTGCTGGTTCATTTAAGCTTTAAGCTTCTACTCTAAGGACCATCGGTTGCTCTAATGGAAAATTCCACTCCAGAATAATCAGCTAGGATTTTATCAGAAAAGCCGCATTCCAGAAGCCACTACCTCGAATGCTTCTGTGATCGTGTCTCACTGACTACTTATGGCTTTGTTCTTTAGCATAGTGAATGTGAGGAATGGATTTTTATTGTTGAAATTAGTTCATTGTTAGTAAGACGAACATTAGAAG TCONS_00181485 r 5' 26627 TCONS_00181485 r 5' 24610 EMBV3_20970 AGTCCAGGTCTGCCACTGTCTATCCTAAACCAGCCTCTGTCCATTTCAAGCCTTCCTCTG Gene GeneID:530065|GPR50:XM_002699646:137_cdna Constitutive 0 NULL GeneID:530065 X GENE GPR50 NULL G protein-coupled receptor 50 EMBV3_06329 GTCTTTGGCCAGTAACCTGCTTTTGTACTCTGCTGGTGCCCACTGCCCCTCCTTGTTTCT Gene GeneID:508510|SCAMP5:NM_001166565:46_cdna Constitutive 0 NULL GeneID:508510 21 GENE SCAMP5 NULL secretory carrier membrane protein 5 EMBV3_35859 ACCAGTAGTAAGGGATGTAGAGAGTCCTATTGGGTGGGGAGGGCAGGCTTCTCCTGTTGT Gene BVV0102_055137 + 0 NULL GK000019.2:20525357-20548271 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14738 GCCCCATAGTTGGGTAAGCACTTCCTAGACTGAGAAAAGCAGCTACAGTAAATCCTGCTC Gene BVV0101_062132 + 0 NULL GK000018.2:39551831-39556896 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083165 TCONS_00083164 TCONS_00083167 TCONS_00083166 TCONS_00086210 TCONS_00083168 2 XLOC_051195 XLOC_052075 Coding TCONS_00083168 XLOC_051195 Coding Coding PHLPP2 18:39491290-39555451 j TSS62571 8159 1 TCONS_00083168_7 1319 19 0.873129675810474 0.000733498760828946 0.00135477136949238 1.11607468778574e-06 0.00125579428980729 0.000786506843712672 0.000822877944836686 0.000698522280022184 4.74641484812844e-05 0.00267241359487263 0.00103823839245243 0.000611909936320544 0.000425890591335495 0.000118411203723845 0.000258215840209934 4.65690764728794e-15 0.0106632776196428 0.00592510671836116 0.00654306315118747 0.00056660208657713 0.000431397216124452 2.8711349874262e-08 0.00265686405659267 0.00227628101353207 0.0056883664322306 0.00296070003805159 0.00178870551033804 0.00149584191812143 0.000674632296199264 0.000304364658089717 0.00141928247502614 XM_005218644.1 PHLPP2 PREDICTED: Bos taurus PH domain and leucine rich repeat protein phosphatase 2 (PHLPP2), transcript variant X1, mRNA. 0.0 1.408e+04 100.00 0.956980022061527 XM_005255853.1 PHLPP2 PREDICTED: Homo sapiens PH domain and leucine rich repeat protein phosphatase 2 (PHLPP2), transcript variant X2, mRNA. 0.0 5308 89.07 0.49589410466969 TCONS_00083168_7 sp|Q6ZVD8|PHLP2_HUMAN PHLP2_HUMAN PH domain leucine-rich repeat-containing protein phosphatase 2; 0.0 2483 93.27 0.999241849886278 5 coding 1 1 1 0 0.0480413538526743 0.8743735664772 0.0159114851236224 0.863643584356232 GTAATGATCGTTGGATTGAGAGTGCGCACCAGAGAAATATGAAGCGCAATGGGAGCAGAAATTGTTTGAATAGGAGAAGTAGGTTTGGTTCTCGGGAGAGAGACTGGCTGAGAGAAGATGTGAAGAGAGGCTGTGTTTACCTGTATGGAGCGGACACGACCACTGCCACTACAACCACCACTTCCTCTGCTTCCTCCTCCTCCTCTGACTTACATCTTGTCCTTTGCACAGTAGAGACACCAGCATCAGAAATTTGTGCTGGAGAGGGAAGGGAAAGTCTTTATTTGCAGCTTCATGGAGACCTGGTCAGGAGACTGGAACCTACCGAACGACCTCTTCAGATTGTTTATGATTACTTATCCAGGCTGGGGTTTGATGACCCTGCTCGAATACAAGAGGAGGCAGCAAATCCTGACCTTGGCTGTATGCTCCGATTTTATGGTGAAAAACCATGCCAGATGGATCATCTGGATCGAATCCTTCTGTCTGGCATCTATAATGTACGCAAGGGAAAGACCCAGCTGCATAAGTGGGCTGAACGCCTGGTTGTTCTCTGTGGCACCTGCCTCATCGTGTCCTCAGTGAAGGATTGTCAGACTGGGAAAATGCACATATTGCCTCTGGTTGGGGGAAAGGTAGAAGAAGTGAAGCGACGTCAGTACTCCCTTGCATTCAGCTCAGCTGGAGCCCAAGCGCAGACCTATCTTGTCAGCTTTGAGACTTTGGCTGAGTACCAGAGGTGGCAGCGGCAAGCTTCCAAGGTGGTGTCCCAGCGCATCAGTACTGTCGACCTCTCGTGTCACAGCCTTGAGGAGGTTCCTGAGCATCTCTTCTACAGTCAAGATATCACCTACCTCAACTTGCGACACAACTTCATGCAATTAGAAAGACCAGGGGGCCTTGACACTTTCTACAAATTTTCTCAGCTGAAGGGCCTGAACTTGTCCCATAATAAGCTTGGGTCATTTCCTGTATTGTTATGTGAAATTCCTACCCTGACTGAGCTCAACCTTTCCTGTAATGGATTCCATGACCTGCCGAGTCAGATTGGCAGTCTGCTGAATCTTCAAACCCTCTGTCTTGATGGCAACTTCCTGACCGCTTTACCTGAAGAACTGGGAAATCTACAACAGCTGTCCTCCCTGGGAATTTCCTTCAACAACTTTAGTCAAATTCCCGAGGTTTATGAGAAACTCACTATGTTAGATAAAGTGTTTATGGCCGGAAACCGAGTGGAAGTGCTAAACCTGGGGGTGCTGAAACGAATGAGCCATGTCAAACATGTGGATTTGAGGATGAACCATCTAAAAACCATGATTATTGAGAATCTGGAGGGAAATAAATACATCACCCACATGGATTTGCGGGACAATCGGCTGACTGACTTAGATCTTAGCTCCTTGTGCAACTTGGAGCAGCTGCATTGTGAGCGGAACCAGCTGAGGGAGCTGACCCTCAGTGGCTTCTCCCTTCGAACTCTCTACGCCAATTCGAACAGATTGACAACAGTGAACGTCTATCCAGTACCCAGTCTGCTCACGTCTCTAGAACTCTCCCGAAACCTGCTAGAGTGTGTCCCTGACTGGGCCTGTGAAGCAAAGAAGATAGAAATACTAGACGTGAGCTATAATCTCCTGACAGAGGTTCCCATGAGAATCCTTAGTAGCTTGAGTCTTAGGAAACTAATGGTGGGACACAATCATGTGCAGAGCCTTCCCACGCTGGTGGAGCACATCCCTCTGGAGGTGTTGGATGTCCAGCATAACCTGCTCACCAGGCTGCCAGATACTCTCTTCTCTAAGGCCTTAAATCTCAGATACTTGAATGCATCTGCAAATAGTCTGGAGTCTCTGCCATCTGCCTGTGCTGGGGAGGAGAGTCTGAGTGCGTTACAGCTGCTCTACCTGACCAACAACCTCCTGACAGATCAGTGTGTGCCCGTCCTGGTGGGGCATCCGCACCTGCGCATCCTGCATCTTGCAAACAACCAGCTACAGACGTTTCCTGCAAGCAAACTAAATAAATTGGAGCAGTTGGAGGAACTAAACCTAAGTGGTAACAAGCTTAAAACCATCCCCACGACCATTGCGAACTGCAAAAGGCTGCACACTCTGGTGGCCCACTCCAACCACATCAGTATTTTTCCAGAAATACTGCAGTTGCCTCAGATCCAGTTTGTAGACCTAAGTTGCAATGACTTGACTGAAATCCTGATTCCAGAGGCTCTGCCTGCTACTTTACAAGACCTGGACCTGACTGGAAATACAAATCTTGTTCTGGAACACAAGACACTGGACACATTTAGCCATATCACCACCCTGAAAATTGATCAGAAACCTTTGCCAACAACTGATTCTACAGTTACATCAACCTTTTGGAGCCACGGACTGGCTGAGATGGCAGGACAGAGAAACAAGTTATGTGTATCTGCTCTAGCTGTGGATAACTTTGCAGAGGGGGTGGGAGCTGTGTATGGCATGTTTGATGGTGACCGGAATGAGGAGCTCCCTCGCCTTCTCCAGTGTACCATGGCAGATGTGCTTTTGGAAGAGGTACAGCAGTCAACAAATGACACAGTTTTCATGGCTAACACCTTCTTGGTATCTCACAGGAAATTAGGAATGGCTGGCCAGAAACTAGGCTGTTCAGCTCTCCTTTGTTACATCCGTCCTGACACTGCCGATCCAATGAATAGCTTTAGCTTGACTGTGGCTAATGTTGGCACATGCCAAGCAGTCCTGTGTCGAGGTGGGAAGCCAGTGCCACTCTCTAAAGTCTTCAGCCTGGAACAGGATCCAGAGGAGGCTCAGAGGGTGAAGGACCAAAAAGCCATCATAACAGAGGACAACAAAGTGAATGGGGTGACCTGCTGTACCCGGCTGCTGGGCTGTACATACCTCTACCCTTGGATCCTCCCCAAGCCCCACATATCTTCCACTCCACTCACCATTCAGGATGAGCTGCTGATTCTGGGAAACAAAGCGTTGTGGGAACACTTGTCATATACAGAAGCGGTCAACGCAGTACGCCATGTGCAAGACCCATTAGCAGCTGCCAAGAAGCTGTGCACATTATCCCAGAGCTATGGTTGTCAGGATAATGTGGGGGCGATGGTGGTTTATTTGAACATTGGTGAGGAAGGCTGTACTTGTGAAATGAATGGGCTCACGCTCCCAGGTCCTATGGGATTTGCTTCAACCACCATCATCAAAGACCCACCCAAGCCGACCACTCCTTCCTCCAGTAGTGGTATTGCCTCTGAGTTCAGTAGCGAGATGTCCACTTCAGAAGTGAGTAGCGAGGTGGGGTCCACTGCTTCTGATGAACATAACACTGTTGGCCTGGATGCTGGCTTGCTTCCGAGGCCAGAGAGGCGCTGCAGCCTCCACCCAGCACCTACTTCGGGGGTGTTCCAGCGCCAGCCCTCTTGTGCGACTTTCTCGAGTAACCAGTCTGACAATGGCCTGGACAGTGATGATGACCAGCCGGTAGAAGGGGTCATAACAAACGGCAGCAAGGTGGAAGTAGAAGTAGATATCCACTGCTGTCGGGGGAGGGATCTTGAGAACTCGCCCACCCTTCCAGAGAATTCTCCTGCCCCGTGCCCTGAGGACCGTTCTAGAGGATCGTTATTTGGGATCCGAAGACAGAACAGTGTGAACAGTGGCATCCTTCTGCCAGTGAGCAAAGACCGGACCGAGTTACAGAAGTCTCCCTCCACTTCCTGTCTCTATGGAAAGAAGCTCTCCAATGGCTCTATTGTACCCCTGGAAGACAGCCTGAACCTCATCGAGGTGGCCACCGAAGCACCCAAGAAGAAAACCGGCTATTTTGCTGCCCCCACTCAGCTGGAGCCAGAGGACCAGTTTGTTATACCTCGTGACCTAGAAGAAGAAGTGAAGGAACAAATGAAACACCACCAGGAAAGCAGGCACGAGCCTGAGCCCAGTGAAGAGGATCGGACCGAGCTCCCGGAGGAGTTTGACACGGCACTGTAGTCTTCCCCCAGGGGCCATGGCATCGCGCGAGGCTGCATGGTGTAGGGTAGGGGACCCTGCCAGGGGCGTTCTGCCTCTGTATCTCAACCACAGATGAGAGGGGGCTGGATCTCGGAGGTGGAAATGGTGAGAGCTGTCAGGGTCTTGCTCTGGATAAGCTAGTCAACACCATCAGTGTTAAGTTTCATGTTTAACCTGCATAGGGATCCCCAGGTTCCTGGGGAGCAGGTGGGCATTACTCTGTATCAGTCTTGCCACCTGCCGTTAACCCTTTCTCTCCTAGGATAATTTTGAGAATTTGCCTGCCTGGGCAGGAAAGGGACTATTTCTGTGGAGGAATAACTGAAGATTGGTTCCTTTTACTGATTGCTGCTGATAGATCTCTGTGACAGAGAAATCACCTTCTATCTCAACCTGATGGGATGTGATGTGTCTAGTCACATGGCTTTTCCTTCTTCTCTACGAGAATACAGCCTATTGAAATGATGTTTATTGGAAATGTAGAACCAATCAAACAGATAATTTATGTTTGTGATGTAATGAGAGCACTTTCCACTGACTGTGAACTTTTTATTTTCAAATCTGCGCTCGAGCCAGTCTTCTTAGAGGCAGCCCAGATCCTTTGTCCATAGGCAGGATGATCATCGGGAGTTGGGGCCAGCTGTGAGGGTACGAGGAAGGGCCCTGGGAAATGGACTGTTGGATGTCAGACTGAAAGTTCGTGAGAAACAGGGGAGTAGGATCTTCTTTGGGGGATGAAGATGGGGAAGGGGTGAGGAACAAGACTACTTCCCCCAAATCACAAAAAGAGAATAACTGACAAATGCGACACCTGATAGGAATCTCCCAGAAGATCACAAGAGAGGCATTTGGGGATTGGCCTCTTTCCATAACATGAGGTGGAGATGGCAGTCAGCCTTCTAGTACGCAGGGCCCAAGGCTGATGCTGCTGCTCACATCCAAGTAACCTTGAGTTACAGCAGATGACTCTGAACAGACTGAGGCTGAATGAGCACAGATGGATGGATAGAGCTTCCAGTTAGACAAGTTCCTTCTCTCATTCTCAAGCCTAGAGATGGTTTTCTAAAACATGAGGAGTGAGTTGAAGTTTCAACTTTTAATGGTTAACAGAGTCTTCTGAAAATGCTTATCCACCTCACATGGCTTCACAGTACTGGGCTCAATTTCTGAAAAACTTGATTGAGAAAGTCCTAAGCTTACAGAAAACCTGGTTTACTGATTTTTTTTTTTTTTTTTTTGCACATTCCATGTAAGCCTAGCAAAATGCAGTTCCTTCCATATTTCTGTTCCATTGCCTTTTCCTACAAAGTTTTGACATTGCTTAATTTTACCCAGTGGGGAATGTGCTTTGAATTTTTAGAATACTTTGACAATTGAAAATAGAGTAGAATCATTTTTAATCTGTTTCATGAGAAATGAAATGTTAAAGATAGGGTTGATCTATACATACATATGTTGGGGGTTTTATTTTAAGTTTTGCTGAAGCAGTAGTAGAAAACCAGTGACCTCTCCACAGATAGTTAGGTATCCTCATCTTCTCAGAGGTCTGTACCCATGTGTATGTGTCAGTGGGGTACACACTCTTGGAAGATACCATACCAATGAGTGTCTGGTGTTCACCCTCTCTAAGATATGAATTTGAGTTCCCAAATTGTCAGGAACACTTTTTTCTGTGTCAAACTACTTGTTAGCTACTGAAAAATTTTAGAACTCAGGTCTTGATTTGAAGTGAGGAACATAATATGGTTCATACAAAGTTCAGGTGCTGTAAGAAAGATGGGAACAATAGTGTGTTGCCGCCTTATTTTTTTATGGGAAAATGGGGGGAAAATGAAGGAAAAATGAAGGGAAAACCCAAGATGATAGTGATGAAAATTATTTTGGGACGATACCACTTTAATAGTATAGTCTTTTTAAAATTGTCCTTTATCTGTGAACTGTTTCTTGTCTCTTTGTTTCCCACCCTACACTAATTGGAATCACTACAAAGCCCAGTCATGAAACTACTTAACTGAAAGTAAATGTATTTACTTTGTAATCAGAAGAACCTTCAAATTCCCAGTGTTCTTTTATGTTTATGTCCCAGGTTTATGTTCAGGAAACGTTAGGTTGTATGAAAATCTTTAATATAGGCTGTACCAAAACCGATTGCTCTTTTCTTTTGTAGGTTCCTTTGATTCATGTCCCTCTATAATTGCTATTTGTTAAAACAGAGGATGAAAAGGCCATAGCCCATCACCAAAAATACACAGAACCCTCTTGACCTATGAAGTCATTTACACTTACTGTGTGAGCTGATTAGGTTGTCAGGTGGTAAAAGCCAGTAATCTGTCTCCAGGTGAATGTAATCTGCTTCCCAGGACTTTACCCAGAGGACACGTTCCCCAGGTGGGCAGAGGCCTGTTGATCTCTAGCCCAGAGGTCCCGGGCTCTGCACGATACTCAGGTCCCTGTGTGTACCTCCCATTTAATGGAGCTGTTTAAGAGAGTTTCTGAAAGAACATCACTCCTGCTTATGGGAGTAGTCCAGGAGTCCTATGGAAGAAAGAAAACTAGACAAGTCTTGGCAGCCATGGTATTTTTATTCTTATCCAGATGGATTGGAAATGTATTTGAAAATTTGAATGCTAGTATGTCATAGAGCTACCGTGATACCATAGAGTCATTGAATTATTACTCCTCATTCAAGTGAGGGCTTCCTTATACTACTGTAGAGTGTATGTGCAATAAGTTGATGAATTCATTTTCTTGATGTATAGAAGAGCCAACACAAGCAGCTTGGTAATCATTGGGTGCTATTTTAATTGTTTGTAGCGAGTGCTATTTTCTAGGAGATGGAGCCAGTTAGATTTGGCTGATCTGCTGAATATCAGATGATGCCCTTCTTTCCATGTCAGCTCTCAGCAAAAGCAGGTACTTGGAAGCCACAGGCTCCCCTCCTCTGTCTACTCAATAATCACTAATGAAGAGACCTCCACAAGGGAGCACTTGGCTGTTGTCGATAAACATACCAATTATTAAATAGTCTCCAAGCCATTCAGTGATGTCTGCAGCATCACTCTAGAACTGTCTTGTGTCACTTTTTTACTTCCCTCTGGGCGGGGCCTCTCAGACTCCCTCGTTCATGGAGGCAAGTTAATCTTTCTCTCCAGTTAGTGACTTTTGCCCCATAGTTGGGTAAGCACTTCCTAGACTGAGAAAAGCAGCTACAGTAAATCCTGCTCTGTTTCCCTCATTTGGTGACCATTCAATCACACATAAGCTCCTTGTATTCTAAATTTCATGCACTTCTCCCAGACGCTATAGGGTTTTCTCTCACTGTTGCCAGTGGAGGTCATCCAGACAGTGAGTTCATATCTTATGGTTTTGTGCAATCATTGTCGTATTGTAGTCCTAAGACTCATTATAGTGTATTTTTGATATTTTTGAAATGTGTTAAATTTTTTAATTCAATAATATGAGCCAGAGCATGTTGCAGCAAATCTATTGTTTGTAAAAAAATAAAAATAACGATAACAATAATAATAAATAAAATAAAATGGAATATCTTTTTCATGGCTTTGTTTTAAAATGGAATACCTGTTATTTTATAAGTACTTTATTTTAGCATGAAACTGTAATTTTCTCTAACTTGTATGTAGAATTAGTTTCTTAACCAAGAGCACCTTTAGGATTTTTCTGCTTTTTCTTGCTTTAGGGGAAGATAAGTGAAATCACATTCCATGACAAATATGAAGCTATGAGTTAAGGCAAGAATAAATATTTTTGATCACCTTTTAAGCTGAAATAGCAATAAAGTTTTTTACATTAAGAAATATTATATTCTGACTTGGTTTATATGTTTAAAGAAATCCCAAAGACAAGAAGCATGGTCCTTATTCCCATGCAGGTTATTAGCTGATGAAAGGGAACTCAACTTGTGAATAATCTACAGCTCCTCTTAAACCACAGAGCTACCGATGATACAGTGGAACTAAGTGGATAATCTGGCCATCATGTCTGTCCTAATGGCTTTGGTGTTAGACTTTAAGGCCGTGGGTTTTGGCTCACAATACCTCTGATCTAGGTAAGCCTCTAAATTGTTCCCCTCCCCTCTCCCTATTGGTTGTCTCCCATAATTTCTGGATGTCCAGGTAAGAT EMBV3_24887 TTCCTCACAACTTGTATATGAGGGAATTGCACACAGCACCAAGATCTGGGGGAATGCAGA Gene GeneID:407215|KAT2B:XM_002684716:58_cdna Constitutive 0 NULL GeneID:407215 1 GENE KAT2B PCAF K(lysine) acetyltransferase 2B EMBV3_30085 TCCACCACTCCCAGATATATTCTTAGACAGGTATATGGCAGTGTATGGGAGAAATTACAC Variant GeneID:540644|SAMD8:XM_002698916:121_cdna 768^981 2 EMBV3_33688 GeneID:540644 28 GENE SAMD8 NULL sterile alpha motif domain containing 8 EMBV3_36748 TCGAATCTCGGGGTTTACGGTACTTCATGCTAGTGCTCTGTCGGCATGCTGTTGCTGACT Gene BVV0102_388735 + 0 NULL GK000025.2:2565299-2578798 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147681 1 XLOC_089568 Coding TCONS_00147681 XLOC_089568 Coding Coding - 25:2576252-2577613 - TSS110216 1361 1 0 0 0 0 0 0 0 0 0 5.79730190190527e-06 3.32545726053549e-05 3.36397397789504e-06 2.36452437524399e-05 0 2.76502617388807e-05 0 0.000999412482465659 1.21985792509414e-05 0.00178825883713383 5.26886569267572e-06 0 0 0.000992331047000944 0.000559476495045293 0.000788343212464047 0 0 0 0.00056459514785436 0.000124843142308106 0.000114855512029049 XM_005196852.1 ZNF213 PREDICTED: Bos taurus zinc finger protein 213 (ZNF213), mRNA. 0.0 2455 100.00 0.999265246142542 NM_004220.2 ZNF213 Homo sapiens zinc finger protein 213 (ZNF213), transcript variant 0.0 704 92.68 0.350477590007348 0 coding CCCACGCACCGGCGGCAGCTCCGGGACCTGGCGGCCGAGAAGCCGCACAGCTGCGGCCAGTGCGGCAAGCGCTTCCGCTGGGGCTCCGACCTGGCGCGCCACCAGCGCACGCACACGGGCGAGAAGCCGCACAAGTGCCAGGAGTGCGACAAGAGTTTCCGCAGCTCCTCGGACCTGGTGCGCCACCAGGGCGTGCACACGGGCCAGAAGCCCTTCTCCTGCACCCAGTGCGGCAAGAGCTTCAGCCGCAGCGCCTACCTGGCTGACCACCAGCGCATCCACACGGGCGAGAAGCCCTTTGGCTGCAGCGACTGCGGCAAGAGCTTTTCACTGCGCTCCTACCTGCTGGACCACCGGCGCGTGCACACGGGCGAGCGGCCCTTCGGCTGCGGTGAGTGCGACAAGAGCTTCAAGCAGCGCGCCCACCTCATCGCCCACCAGAGCCTGCACGCCAAGATGGCCCAGCCTGTGGGCTGAGGACGGGAGCGGGACCTACCCACCCGAATCCACCATCTCAGTGTGGCTTCCCGCTCACGGAACCGGCGGCCCTGCCCTCCTGGGACCCTGGCTGACGCCTCGGGGCATGGAGTCCTCCGTGACCTCACTGCCAGACTTCTAATGCTCCAAGGTTTTTCTTGCCCCTCGTTTCCTGGAGCCCCAGCACGTTGCAGGCGGGTGGCCTGAGCACGGGGGAGAGGCTGGCACACAGGGAAGTCAGGACTCGGGCAGGGCCTGGAGTCCCCATCCCAGAGCCCTCTTCAGCCCTGCTTGGCCCCGTGGCTCTTTGCTCCCAGCCTCTGGGCTGGGTCCATGGGCCAGGCCTTCTGTCCTGCCATCCTGTGACTTCCTGTGGGAGGGAGGCTAAGCCTCAGGGTGCTGCTGGGGTCGGGGGTCGGGGGAGGGGTCGGCCCACACCTGTGAAGAAGTGGATCCTGGGTTCAGAGGCTTGCTGGCCTCCACCCCTTTCCATGTCCAGGCACTGGCCTCTCTGGCCTGTCCCAGCAGCCCAGAAGCTGCCCACCTCTGCTCTCAGCCAACCTGCCCCCAGCTGAGTTCCCGAGAGTCACCCTCCACCAGCTGGGGAGGGCGGCGTGGGCTCCAGGGACAGAGGCCAACTGTGCAGACGAAGAACAGGGCCGGCCGAGGCTGGCTGCCTCCGCTGCCCCCCACCCCCTCGAATCTCGGGGTTTACGGTACTTCATGCTAGTGCTCTGTCGGCACGCTGTTGCTGACTCCTGAGGCATTGCAGTCCCTGCAGAAGGGCATTCACAGGGACTGACCACAGGCCCTCCCAACGAGCTGGCCCAGCTGGCCTTAGAAGGGCAGCAGAAAGATGAGAATAAACATGGAAACTTTCTCCA TCONS_00144301 . 5' 1186 TCONS_00144301 . 5' 1186 EMBV3_32217 ATTTGCTGTGGACCTGACCATGGAACTCTACCAGCACCGGGAGTCTAAGGAGTGGTTTGT Gene GeneID:515738|ACP6:NM_001099373:68_cdna Constitutive 0 NULL GeneID:515738 3 GENE ACP6 NULL acid phosphatase 6, lysophosphatidic EMBV3_35851 ATTAATTTTTAATATTTTAATTGATTTCTTTAATCAGTTTCTCAACTTGTATTTATTAAA Gene GeneID:515181|RAP2C:NM_001075700:80_cdna Constitutive 2 NULL GeneID:515181 X GENE RAP2C MGC143331 RAP2C, member of RAS oncogene family EMBV3_22989 TCCTGCAAGATAGATGGAAGGAATCATGAGGTGGGGGAGGGAGAATACCTCTAACAGCCA Gene GeneID:534560|TMEM150C:NM_001078001:19_cdna UTR3_Alt 2 NULL GeneID:534560 6 GENE TMEM150C MGC152232 transmembrane protein 150C EMBV3_13163 TTGGGAGCTGAGCCCAGGTGCTTCATAACTGGTAACTGAAATCGGAAGGCAGGAGCTGGT Gene GeneID:508869|RND1:NM_001046016:47_cdna Constitutive 0 NULL GeneID:508869 5 GENE RND1 MGC137895 Rho family GTPase 1 EMBV3_10262 GACACCATCATGGAGAAGCGGTCCTTCAAGTCCGAGCAGGTGGGTGCTGTGGCCAGCCCC Variant GeneID:530527|C22H3ORF37:NM_001075934:35_cdna 378^503 1 EMBV3_41012 GeneID:530527 22 GENE C22H3ORF37 MGC142929 chromosome 3 open reading frame 37 ortholog EMBV3_19640 TCATTCCTCTGGAAAACCAAACAGAGAAAGACCTCAGGCGGACAGGCCATTCATTTCCCT Gene GeneID:280863|MOG:NM_001013584:21_cdna Constitutive 0 NULL GeneID:280863 23 GENE MOG NULL myelin oligodendrocyte glycoprotein EMBV3_15421 GCATTTCCTTTACCCTAAGACAGTAGCCAAGGTCTCCTCGCTTTAAGAAGCACTGCAAGG Gene BVV0102_169305 + 0 NULL GK000002.2:25336933-25566347 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101922 TCONS_00101926 TCONS_00101930 TCONS_00104779 TCONS_00101921 TCONS_00101927 TCONS_00101929 TCONS_00101928 TCONS_00101925 TCONS_00101932 TCONS_00101931 2 XLOC_061790 XLOC_062454 Coding TCONS_00104779 XLOC_062454 NonCoding NonCoding - 2:25495019-25500520 - TSS77510 3131 2 TCONS_00104779_2 71 0.190993292877675 3 0.431272727272727 3.53054389859084e-05 2.47942879770048e-05 0.000252274043940755 6.16268092462434e-06 1.10546208664982e-06 1.1424644248913e-05 1.10945292448341e-05 2.78192704899721e-06 7.22077985482775e-06 3.56496133720868e-06 0.000213931433515183 1.25622777383185e-05 0 4.77648701126768e-222 0.000162430180835924 1.68938336440696e-05 0 3.74252850286899e-05 3.52022843280313e-05 1.0383478494961e-05 0 0.00167647016593981 0.000182503495192805 2.70829204033251e-81 5.13697333048148e-29 5.60775516910674e-08 1.66230820854131e-314 3.7372089346017e-05 2.62620576420625e-05 3.16772630749457e-06 XM_617685.6 TLK1 PREDICTED: Bos taurus tousled-like kinase 1 (TLK1), mRNA. 0.0 4785 99.63 0.858831044394762 NM_012290.4 TLK1 Homo sapiens tousled-like kinase 1 (TLK1), transcript variant 1, 4e-138 497 71.28 0.324177579048227 0 noncoding GCAGAGTAGGAAATAGCAACCCATTCCAGTATTCTTGCCTAGAGACTCCCGTGGACAGAGGAGCCTGGTGGGAGTCGCACAGAGTTGGACAAAGCTGAAGTGCCTTAGCATGCATGCATACATTGGAGAAGGAATTGCCAACCCACTCCATTCTTCTTGCTTGGAGAATCCCAGGGACAGAGGAGCCTGGTGGGCTGCCATCTGTGGGGTTGTACAGAGTTGGACACGACTGAAGCGACTTAGCAGCAGCAGTGGCTACCTCTCTTGTAATTGGAGAAACTGCATAACAGCCTATCATCATAGGGTGTCCTACAATTACTCTTGAGCCTCTCAGTGCACTACGGCCAGCATTTGATCTGCTTGGTCAAAGCTCATGCCGTGTTAGTTGGAGGAACTTCCTGCAAGGTGGTACTCTTCATATACACACTTCACAGATATGGAAGTTTTTCCAGATTTCCTCTGAGACCAGCTGGTACCACTGCAGGGAGAGGAAGGAGAATATACCTTCTACCTTCATGGAAGTTGGCTGAGAATGAGAAAGGTGAACTGATCTCTGTAAGTTATTAATAAATTTAAAATGCAATGAAAAACAAGTGTGAGAATAGGAAAAGGCTTGTAACCCCACTCTCTGCCTTGCCTAGGACGAGTCTGGACAAAAAGCCCTCTCTCAAGTGATTCTCAGCCATCCCGGCTCAGCTCAGACAGCATTCCTGATCTAACAACTGAAGAATTCTTTTTATTGCTCTTTCATGGTGACAGATTTGTATCTGTTCATTTTTGTTATTTTGAACAATCATGATTTAACACACTAATGTGTTCTAATAAAGCAGCAAGATGTTAGCACAGTTAAGTACTTTGCTTTAGAACTCCAGGAGCTGTGCTTTTAGTTCTGATGTCATTTACTAGTTAATGTGGTCTTACCAAGTCATTTCTTTTCTCCAAATGTTTCTCCTCTGTAAAACTGGTATAACAGTACCTATCCTACCTCAGATGACTTGTACTATCAAGGAAAACCCCCTGGGATGTACGGTAGAATTTGCTCTGATGAAATAGCCTGAATGGTTAGAGTGTGATCCTTTTGGTAACTACAGTTGAGACAACGTTACTTTTTGTTGCCACACTGCACCACCTTCCCTTTTCAGGTAGTCTAATTGCTTAAAACAAGTTAAAAAAATACTACAGAACTTGTTTCTTAAGGGGGAAATAGTATTTCACAGGAAGCAAAGTGGACTACAAATGTAGGATAAAAACAACAGAGTAACCTTTGAGTCTTAAAGGAGAATAATAGCTTTATACACATGGTATTACAATGAGCTGGGTGTGGTTCCAAGTGCTTTATGCGCATGAACTCATTTATTCCTTGCAACCCCTTTGTGTGGTAGGTACTGTTATCCCCATTTTCAGAGGATGAACTTGAAACACAGTGGCAGTAAATGGCAGTCAACATTTAAACCCAAAGAACCTGGTTCTAAACTGGGTTCTTAACCAGCATTCTTGCCATTGCCTTTTAAAAACTGTCATATGTATGTAGGTAATACACATTTCTAGTATGTTAAATGAGTGAGAATTTCCAGGTGAAAATCATGCATCTTGATCCTAATGAAAGATAACTCCTCTGAATTCTCCTCTGGCTCTATGCAGTTGTTTTGAAGTTAGTCTATACACATTTACTCAAATCTTTCCCATTCAAAAATCCAAGAATTCTCAACAAGAAGAATCTTCAAAAAAAGAACAGGGAAATGAAAGCAGGGGAAGGTAAATGGAGATATGTATGTTATAATTCAAATCAACGGAAAGTTGTAGAAATTCTAAGACTTTTACAGAATTCCTGGAACCCAAGAACTAGAATTCTAATAATTTTATTCTAAAGCTAGCTGCAAAAATAATTTTTAAATTAAGCCTTAAGAACATTAAAGTTTAGTATATTTGGGAGGAAAATGATCAGGTAACATGTCAAAATTTAAAGTGGGATTATTTTAAGACATGCCCGTGTGATGTTAAAATGTGTGTAAGTCTGCCTTTTCCACACACAAACAGTAATGTAAGTTAAACTCACAATCTAATAGGACTGGACAGTCTGCACTACTGCTGCAAAACACAGCTAATAACATCTGATGGTAATCAGCATTATTGTATTTAATCAGTAACAACAGCAAAACACACAATATACTCTTTAAATTTGTTTCACTGAAATTCTACCATTTTGGTTTCATGTAATGAGGTATTTGTAGAAGTATTTGTTCACATTTTATGTACCATTTAAATTGAAAATTATTTTTTTAGGAGAAGGGGATGGCAGCCAGTAAGTAAAAAACAGACTTAAAACTTCATTTTTGAAAAACAACCAAGTAGCTACCCAACTCCAGACTTAATAAATTAGTGTGGTTTCTACACTTATTTCCTCTCAGCATGCATGCACTAAAGCTAATTCATATCAGAGAAATATTATAAATTATATGCAAAAACTATACATTTACCTTGCAGTGCTTCTTAAAGCGAGGAGACCTTGGCTACTGTCTAAGGGTAAAGGAAATGCTTTAATTTTGAGGATAGAATTTAGACCAAAAAACAATTTAAGCCTCAAAAGCTAATTAGAGTAAAAGATTATCAGCGTGACTGAAATTAGTGATAAATAGAAGTGTCCCAGGTAAAGGTAACAGTTCTCACTTTGGCTCAGTTAGCTATCTTGTACTTGCTGGGGTAGGGACATACTATCCCAAAGCTGTGTCATTTCTGTCATTTCTTTGGAAAAACTTTAAGAGGAATAGAGGGTCTCAAAGCTGGCTTATCACTCACACACCTTGGATTCTAAACAGATGATTACCTAAGCCCAGGGAAGCAATTTTATTTTATGGCTTATTCTCCTCCTCTTCTGCATTCTGACAGTAGCAGTCACTTCCATTTATTTGAAAATGATATGATAAAGGCCAGTGATCTAAGTCTGTACCTCTTCTTCAATCTCATGTTAGACATACACATCCACTTATATACCTCACTAAAATTTTAAAACTGGGTATTTTAATTGGGGACTTTAAATAACAGTTACTATAATGAACATAGTATTTCAGGATTCAGAAGGATGAAAACTCAAACAACAAAACTGAAAAATTTGCAGACAGCACCTAAAGCAC TCONS_00101932 TCONS_00101932 r 5' 0 TCONS_00101932 TCONS_00101932 r 5' 0 EMBV3_00373 GTCAGCAAAGAGAAAGCCGAGAAGGCAGAGATTCCCATCCTCCCTGATGTCGAGCAGTTT Gene GeneID:787899|GPR151:XM_002689300:152_cdna Constitutive 0 NULL GeneID:787899 7 GENE GPR151 NULL G protein-coupled receptor 151 EMBV3_30051 CGGAGAATTTTGTGAAGTGTGCCATTAAAACCATTGGCGTGCAATCCCGGACCAGTGGAT Gene GeneID:789567|LOC789567:NM_001101307:120_cdna UTR3_Alt 2 NULL GeneID:789567 15 GENE LOC789567 NULL similar to steroid dehydrogenase homolog EMBV3_27277 GTCCTTTGGGGACCCCAAGGAGAGAGTCAGTCCAAAGGCATCTACTACGTGCAGCTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43195 GGACACATATCCTAGGATTCAACTTGGATGAAGTTTAGAAGCAGGCAAAACTGGACCCAC Gene BVV0102_248382 + 0 NULL GK000027.2:32418889-32683064 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33751 GGCCAGAAAGGATGAATTCGGATCAGGAAATAGAGAGTGACAAGACACCGCCTGGCATTC Gene BVT0101_077587 + 0 NULL GK000022.2:55621189-55695782 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23734 AGGTTGTACAGGAGCTGATTGATGAGTACCACGCAGCCACTCGACCAGACTACATCTCCT Gene GeneID:540216|TUBG2:NM_001037615:198_cdna Constitutive 0 NULL GeneID:540216 19 GENE TUBG2 MGC133882 tubulin, gamma 2 EMBV3_01505 CCTGACTGAGCTGACAGATGAACAAGCCAAGTATCTAGGGCTCAACAAGAATGGGCCCTT Gene GeneID:532836|AHCYL2:NM_001101143:176_cdna UTR3_Alt 2 NULL GeneID:532836 4 GENE AHCYL2 NULL adenosylhomocysteinase-like 2 EMBV3_41947 TCATCACGGACCACCGCTGGAGCAATGCAGAAGGGACAACGGAGAACATCGCAGCCCAGG Variant GeneID:513958|EIF2B2:NM_001015593:109_cdna 193^462 2 EMBV3_32518 GeneID:513958 10 GENE EIF2B2 NULL eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa EMBV3_21532 CTGCTGTCATCCTTCATGTCAAGCGCAGAAGAGTCTGTGTCAGCCCGCACAATCACGTTA Gene GeneID:535328|CCL28:NM_001101163:77_cdna Constitutive 0 NULL GeneID:535328 20 GENE CCL28 NULL chemokine (C-C motif) ligand 28 EMBV3_06447 GACGAGCTGTGGGTGCAGGTAGCGTTGCTGTGGCTTTAATGGAGGCAAGCCTATTGACAA Gene BVT0102_043383 + 0 NULL GK000017.2:74331832-74333064 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078337 1 XLOC_047287 Coding TCONS_00078337 XLOC_047287 Coding Coding THAP7 17:74332116-74335672 = TSS58312 2099 1 TCONS_00078337_3 219 3 0.410407876230661 3.91685287680093e-11 8.40911425531818e-05 0.000176350274762111 0.000470790954741771 0.000155241226350495 1.3749361205053e-11 9.67782938178142e-05 1.46529106967881e-05 0.000112769940248281 7.24180034620063e-05 1.3447009617045e-05 8.97859877292718e-05 1.36697435677903e-06 1.97649003316654e-05 3.17085872937395e-05 0.00233791257536013 0.000363841066193349 0.0045127771470727 8.91400928146814e-05 0.000140470920775231 5.24433845706298e-06 0.00102878331431543 0.000524354685952693 0.00150154712892606 0.000316881978777881 2.38890725537467e-05 6.14107724675977e-05 0.000112344134676675 0.000196589686470398 0.000125210858869074 NM_001098465.1 THAP7 Bos taurus THAP domain containing 7 (THAP7), mRNA. 0.0 1209 100.00 0.318723201524535 NM_030573.2 THAP7 Homo sapiens THAP domain containing 7 (THAP7), transcript variant 0.0 765 89.04 0.277751310147689 TCONS_00078337_3 sp|Q9BT49|THAP7_HUMAN THAP7_HUMAN THAP domain-containing protein 7; 2e-110 324 92.34 0.926940639269406 0 coding 0 0 0 0 -0.0077391731471064 0.94764773434453 -0.0425612932076281 0.474766946511133 ATCGTGCGCCCCGGAGGAGCGGCGCTAGTCTCCCCTGGCCCAGGGCAAACCCCTCTCTCGGGGGACGCGTGCGTGCCGGCTCTGACGACACCACCCCGATCCCGGCGGCCTGGTCGAGGCCCGCGGCTCCTTCCCGCCGCTTCCGGGACCCGCCCCTCAGCGAGCAACGAGCGCTTCCGCGTCTCTATGGTACCGACTTCCGCGGCTAGCAAACCTCGCGAGACCTCGGCGGCGCCGCAATGGCGAGACCGTGAGTGCCGCAGACAGGAGTCGGAAGAGCGGGCTGGGGCTGGACTCGGCGAGGTCGCGCGGGCGAGACTCGCCAGGCCGGGGCCGCCGGAGCGGGGTGGCGGCCTGGACCCCGGCCGCCGCCGAGACCGAGCTCCCGCCTCTGCCCCAGATGCCGCGTCACTGCTCCGCCGCCGGCTGCTGCACACGGGACACGCGCGAGACGCGCAACCGCGGCATCTCCTTCCACAGGAGCCGGCTGCGGCGATGCAGGAAGCGCTGCTCTGAGGGCCGAGGGCCCACCACTCCGTTTTCCCCGCCTCCACCTGCCGACCTCACCTGCTTTCCTGTGGAAGAGGCCTCGGCACCTGCTGCTTTGTCTGCCTCCCCAGCCGGGAGGCTGGAGCCTGGCCTCAGCAGCCCCTTCTCCGACCTCCTGGGGCCCCTGGGCGCCCAGGCAGATGAAGCGGGCTGCAGCGCCCAGCCCTCCCCGGAGCGCCAGCCGTCCCCCTTGGAGCCGAGGCCTGTCTCGCCCTCGGCCTACATGCTGCGCCTCCCGCCGCCCGCCGGCGCCTACATCCAGAACGAGCACAGCTACCAGGTGGGCAGCGCCCTGCTCTGGAAGCGGCGGGCCGAGGCCGCCCTCGACGCCCTGGACAAGGCCCAGCGCCAGCTACAGGCCTGCAAGCGGCGGGAGCAGCGGCTGCGGCTGCGGCTGACCAAGCTGCAGCAGGAGCGGGCGCGGGAGAAGCGGGCCCAGGCCGACGCCCGGCAGACCCTGAAGGAGCATGTGCAGGACTTTGCCATGCAGCTGAGCAGCAGCATGGCCTGAGGGGCCCGTCCAGCAGCACTTGGCCTGCGGATCCACCTGGAGAGGGAGCTGCCCCTAGCTGTGTCCGCCACAATAAAGGGGATCCCAGAAAGCCCTGCTCTCTGGCTCAGCTGAGGGCTGGGGCCCCGCCCCCTGGGTACCATGTCCATCTCCCCTGACTGGCTGTAGCCCCCAGAGGGCTCGGCCCTGCAGTCACGGTGATTCCCAAGCCCCCAGGCCGGCGAGGTCCACCTCTCTCAGGCCATTGCTGAACTTGCTGTCTCCAGGTGACACCCCTAGACTAAGGCTGTCCACCCACCCACCACACCCAGGGCTTGTCAGTCAGGCCGGAGGTGTGGCAGGCCCTGTGTTTATCCTGGGGGCACAACCCGAGGCAGGAAACAAGCTTTAAGGCTCAGAAGACAGTTTCCCCCACAAGTGGCTTCCTGGCAGCCTGAGCACAAGAGCTGTTGTTCCCACAAGGGAGGCAGAGTGGTGCCTCACCCACTGGGATGGCCGCAGGACAGAGGATGGGGCGGCCCGGCCCTTCCCAGGCAGGAGCCTCCAGGCAGCCCAAGAGTCAGGCAGCCAGCAAGGGACCGGGAGAGGCCCGAGGCCGGCCTTCATTCCTCCCCGCAGCCCTCCGTGGGGTGGTGAGTGAACAGAGAGCCACGCAAGGCTGGTGTGTCCTGAGCCCTCGGGCCGCCTGGCCTGGCCTGGCCTTGGGAGGACTGTGCGACGAGCTGTGGGTGCAGGTAGCGTTGCTGTGGCTTTAATGGAGGCAAGCCTATTGACAATAAATAGGGGGACAAGCGGGGACCTGGCACGTCTCTGACTTCCGGGACACCCAGGGCCCCGACGTGCACCTGCGCCGGGGGGCCTGGCTGTCCGGAGATGCTGACCCCTCCGGCTGGGAGCTGAGCTCAGAGCCCTTCCCGCCTCACAATTCATCCGGAGTTGGACTCCACCTGCCCAAGCTCTGGGTGGCAGGACAGGACCCTTACACCGACCTTGATGAGGGTTGGGGGTTGCTGTACGGCCCACATCAAGGCGTCTTGNN EMBV3_41863 AGACTGCAACTGCCGTCGTCTGTTTTCGGCTCAAAGAATCAAATTTGATTTCCACACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29592 GACCCTGTGGAGCGGCCTCCCAGCCACCCTTGGGCACCGTGACTGTGATCAGCCCCCTAG Variant GeneID:509684|SLC25A39:NM_001075415:230_cdna 486^610 2 EMBV3_37009 GeneID:509684 19 GENE SLC25A39 MGC140025 solute carrier family 25, member 39 EMBV3_22460 GCAATCCTCTGAGACATTCCATTATCCTGGCACACAGAGTCATCCAGAACTTGGGGCTGG Gene GeneID:784376|LOC784376:XM_002693334:223_cdna Constitutive 0 NULL GeneID:784376 15 GENE LOC784376 NULL similar to olfactory receptor Olr94 EMBV3_20907 CTAGAAGTGAGAAGGTCCTTACTGTCTGATCTACCCTGCACATGATTACCACGGGCTCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19776 CCACTATGAAAGTGGTTCCTGTGCAAGAGAAGGGAAATACTGGGAGTGAAGACATTTCTA Gene GeneID:521442|SPAST:NM_001081591:26_cdna UTR3_Alt 2 NULL GeneID:521442 11 GENE SPAST MGC143109 SPG4 spastin EMBV3_09143 TGGTGACTCAGGTATTGAGCTCTGCCCTTGTCCTGACTCCAGCGAGGGTGAGCCAGTCAA Gene GeneID:509188|WBP1:NM_001034346:14_cdna Constitutive 2 NULL GeneID:509188 11 GENE WBP1 MGC128715 WW domain binding protein 1 EMBV3_00017 TATTCGCCCCCCTCCCAAAGGAATGAGTAACAATCTGGGTAAAAATGCAAATCTCTGGAG Gene BVV0102_206461 + 0 NULL GK000021.2:40890805-41612768 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39906 AAATTTGCGATTCATTGTGCCCATGCTTACGGTGGATGGGAAGAGGGTCCCAAGAGATGC Gene GeneID:618607|AKR1A1:NM_001076513:322_cdna Constitutive 1 NULL GeneID:618607 3 GENE AKR1A1 NULL aldo-keto reductase family 1, member A1 (aldehyde reductase) EMBV3_20297 TCATGCAAGACCCGGATGAGGAGCACCTGAAGAAATCAAGGGAAAAGTATGTCCTGGAGC Gene GeneID:533851|PDLIM7:NM_001017947:37_cdna Constitutive 2 NULL GeneID:533851 7 GENE PDLIM7 NULL PDZ and LIM domain 7 (enigma) EMBV3_26514 CACTTTCCGCAACTAGAGAAAGCCTGGATGCAGCAACGATGACCCAGTGCAGCTATGAAA Gene BVT0102_049676 - 1 EMBV3_01656 GK000011.2:78962422-78968969 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028581 TCONS_00028583 TCONS_00028582 TCONS_00028584 1 XLOC_015510 NonCoding TCONS_00028584 XLOC_015510 NonCoding NonCoding LOC100847529 11:78963560-78968883 = TSS20026 552 0.530797101449275 3 0.89684329199549 0.00133052081188133 2.93691314594674e-05 1.38909495244531e-15 0.000857493150307486 4.65095719547649e-05 3.65946176110295e-05 0.000137341288161483 0 3.03830214124178e-11 7.85132059097506e-05 7.05002269277423e-05 8.09709493122742e-06 0 0 7.58453752977682e-33 0.00410361010240578 0.00306998864803861 0.00416679165012877 0.000268486925987329 0.00212841209147287 0.00108062479899686 0.00828520123480327 0.000616106454117596 0.00209260984962199 0.000173175337311742 0.000929291910566643 0.000285728575046435 0.000184156981160937 0.000140710545305283 0.000260983465129915 NM_001192140.1 TBX21 Bos taurus T-box 21 (TBX21), mRNA. 3e-42 176 73.87 0.5 NM_001006657.1 WDR35 Homo sapiens WD repeat domain 35 (WDR35), transcript variant 1, 2e-14 84.2 73.28 0.235507246376812 0 noncoding 1 1 1 1 -1.35253791627253 0.0771050660375509 -0.0434298103671971 0.450269249313471 AAAGCTTAAGCAGACGCAGCCTTGGCAAGTGTGCTTCTGCTATAGCTGCTGGTCCCGCTTGCCTGATCTCCAGAAAAGCAGTAGCTTGAAAAAATCTTAAAAACGAGATTATGATGAAAATTTACGGGACACCAGTTCAATCCCTGGTCCAGGAAGATCCCGCATGCTGTGGAGCAACTAAGCCTGTGTACTGAGCCTGCATTCTGGAGGCCATGAGCCACAACTACTGAGCCCACATGCAGCAACTACTGAAGCCTACAAGCCCCAGTGCCTGCGCTCTGCCAACGAAAGAAGCCGCTGCAGTGAGAAGCCTGCATACCACAGCTAGAGAGTAGCCCCCACTTTCCGCAACTAGAGAAAGCCTGGATGCAGCAACGATGACCCAGTGCAGCTATGAAAATAAAAAATAAATTTTTAAAAAGCTATTAGAAACAATTCAAATTGTAAAAACAAAAGCAAAAAGTCTTTAAATGCCTCTTTATCACTTCTGAAAGTAAAACAGAGAACACTTTCAATGCGTATTTAATTAAACATGACTAGAAATAGAGCTCA EMBV3_22814 TTTCAACCCCATGTGTCCGGTGGGGATCTCTGCAGTGTGTGTCTCTGGCATCTCCTACCA Gene GeneID:100337498|LOC100337498:XM_002683731:9_cdna Constitutive 0 NULL GeneID:100337498 11 GENE LOC100337498 NULL ATH1, acid trehalase-like 1 (yeast)-like EMBV3_21035 ATAACAGAGGGACTCACAGTGCTACTTACTTATGCTATTTGCTCCCCAAACTTATCTAGG Gene BVT0102_072000 + 1 EMBV3_29230 GK000010.2:8524195-8528497 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015849 TCONS_00015853 TCONS_00015857 TCONS_00015850 TCONS_00015856 TCONS_00015852 TCONS_00015855 TCONS_00012505 TCONS_00015851 TCONS_00012503 TCONS_00015858 TCONS_00015854 TCONS_00015859 TCONS_00012507 TCONS_00015860 2 XLOC_008575 XLOC_007878 Coding TCONS_00015857 XLOC_008575 Coding Coding WDR41 10:8526059-8687515 j TSS11103 3705 1 TCONS_00015857_2 149 11 0.977120559908334 0.000287076299907162 0.000787632392453363 0.000639785452067919 0.000267121241446721 0.000149267217545934 0.00046214252742543 0.000586323919524423 0.000118482910265985 0.00160361636958294 0.000217662196676328 5.12408630629755e-23 2.56337619539283e-11 0.000149411839251575 0.000407838774050545 0.000320751641232914 9.83325208519625e-20 2.23299724597672e-08 2.55907996537202e-15 0.00027886963585655 0.00161860362554999 0.00010976580912954 1.94805420425035e-21 1.60641394413799e-46 2.8882595242423e-06 0.000147813486044181 0.000356920676451289 0.0004234843958857 1.38432250650353e-11 1.10975219894037e-16 2.74303869128506e-16 XM_005211187.1 WDR41 PREDICTED: Bos taurus WD repeat domain 41 (WDR41), transcript 0.0 2262 100.00 0.338191632928475 XM_005248551.1 WDR41 PREDICTED: Homo sapiens WD repeat domain 41 (WDR41), transcript 0.0 812 84.81 0.186504723346829 TCONS_00015857_2 sp|Q9HAD4|WDR41_HUMAN WDR41_HUMAN WD repeat-containing protein 41; 1e-97 293 91.95 0.993288590604027 1 noncoding 0 0 0 0 -0.0112613964353784 0.917627996244397 -0.0194140428636719 0.76584004940243 GGTGCCCGCACTTAACGCAGGGCCCGAGAGTCGACAAGCTTCTCGCGTGAACGGTCTCTACCGGACAAAGCAGCGGACGGGAGCCCTCGGCGTCGGGCTGCGTCTGGAAGCACCACGGTGACGGAAGCGTGGAGAGCTCCGGAGCTCTTCCTTCTGGCGTCTGCCCCAAGAAATCTCCTTTACAGACAATAGGTGAAGAACAAACCCAGAACCCCTACACTGAACTGCTTGTACTGAAAGCTCATCATGACATTGTACGGTATCTGGTACAGTTAGATGACTCAAGATTTGCATCTGCTGGTGATGATGGAACTGTAGTTGTGTGGAATGCCCAGACAGGAGAAAAACTTTTGGAACTCAATGGACACACTCAAAAGATAACAGCTATTATTACATTGCCTTGTTTGGAAACTTGTGAAGAAAAAAATCAACTGATCTTGACAGCCTCTGCTGATAGAACAGTCATTGAATGGGATTGTGATACTGGTAGACAAGTTCAGAAAGTGTCATGCTTCCAGTCTACTGTAAAGTGTTTAGCTGTTATTCAGAGACTAGATGTTTGGCTCTCTGGTGGGAATGATCTGTGTGTGTGGAACCGAAAATTAGATCTTCTGTGTCAGACGAGCCACCTTTCTGATACAGGGATCACTGCTTTGATTGAAATACCTAAGAACTGTGTTGTGGCAGCAGTTGGCAAAGAACTGAAATGTATTTGTTGCAGTTGGAAGGGGTTTATATGTGTATAACCTTCCAATGAAGCGTGTGATTGCCTGCCAGAAAGCTGCGCATGACTCCAGTGTCCTGCACGTTGCCAAACTCCCAAACAGGCAGGTTATCTCATGCTCAGAAGATGGCAGTGTACGCATTTGGGAGCTACGAGAAAAACAGCAGCTTTCAGTGGAGCCGGCGCCAACGGGTTTTTTTAACATGTGGGGATTTGGAAGAGTAAATAAACAAGCCAGCCATCCTGCTAAAAAGCAACAAGAAAATGCCACTTCCTGTTCACTAGAGCTTATTGGAGATTTAATTGGACACTCATCATCTGTGGAGATGTTTCTGTACTTTGAAGACCATGGACTAGTGACTTGTTCTGCTGATCACCTCATTATTCTCTGGAAAAATGGAGAACGAGAATCTGGATTGCGCAGTTTAAAGTTATTTCAAAAATTAGAGGAGAATGGTGACTTGTATCTGTCTGTCTAGGTTAAGGAATTTAAATACCTGTACATGAACCTTGAACATCAAATATAGGGTAATGCTCTGAAAACCATTACCATATTGATTATTTATTTAACTTTGTTTAATTTTTAGGGGGGTCTGCAAACCAGCAACAGGTTTGCTTCTGAGGTATTAGTACATCCACCAAAGAATATGGCACAAATTTTTCATTTGACTTTCCTCATAAGTTACCTGAAACCATTGTAGGAATGGGTCTGATTTCAGCAGTGACTTTTCAGAAAGTGTTCAGACTTCAGCACAACTGTCTGATGAAGCAGATTTAAATTATACCACAGTATCCTCACAGAGATAAATTTTTTATGCTTTAAATTTTACACTAGAAATTGTATAATCTTATGCTTAATGAAAAGAATAGTACTCAGAACCTCTCTCTGTCTTTAGTGTTACTATATTGCCTCTAACTAAATTCATCACCAGGAATTAGATTTTTAAAGTTTTACATGTAGTTTCTTTCATTTAGCCTTTCTGGATTTTGAAATACCTGTTATCCAAAACTAATATTTTATCTATGTGACCACCTGTCATTCTTTTAAATACTTATTTAAAGAAACCTGCTTTAATGGAAATAAATATACATGATAATTACGGAAGATATTTTATGAGAAAAATGAAAACTCCACTGAAGAATAAATAGGATGTAGCATATCTTGAATTTAAACCTTGAGCTATCTAGAAAACTGATGCTTTCCTGGAGGAAATGAAGATTCCATAGTAACTGTCTGTTGTTGAACTGGTGAATGCTGTGTTTTAAGTGTCTTAATTTGAATCTAGACCCTGGAAGGAGGTAGAAATAATAGTATTTTTTTTATTCTTTGGTTTCCTTTAGAACCTGTTTGATTAAGAATTCTTGTGATAAATATCCTTTCTCCTACAAATTCCCCTGGTCTTTAGTAACTACTACGATGCCATGAAACAAACCTGAATCTCACTGTTCTAACATCAGCTTTTAAAAAAATTTTTGGTGCCAACTTTTAGTGACTGAACAATAACCACCGTTTGTTTATATCATTCATTTTTAATTCTAGCTGCTAAAATCCCTATCAACTCAAATCAGTAGGAATCTTATTAGGGTGTATTTCTTCCCTCTAGCCTGAACACCCATTTGGTACAAGACCAGCGGCTGCCCCTCATATATGTTAGAGATGAGAGCTAGATCAGTAGTGTTACCAAAGTGCCTGATTCATCTTACCATTGGCTCAAATATGAAATGCTTGAGACAGGCTTTACTTAACGTAGTTTCTTGCAGTTACCTGAGATTAAATCAGCTTCATCATCCCATCAGCCTTAGAGTACTGTTTCTCCCTTTTGGTACTAAAGGATAAAAATTAAAAAGTGTCCCATACATTAAAAAATGGGTGGTTTTAACTGTGGAGTTAAACTGCTGATGAAAGAATCCTATTGAAGTAACTACAAGGGGGCTGATGTGTTAGGACTGATACTTCTCAGAGAACACTTTCTGTGTTTATTCATCACACACACCCCTAACAGAATCCACAGACCCTAATGGAATCTTTGTAAAAAAATTTTTAGCTAGTTTTACCTTTGACAGTTGCTTCTGTTATTAACTACCTGCAAAGTCTGGATGAGCTATGGTCCTCTATGCCAGATGAGTGCCAAGCCCAGTCAGGTAAGCCCTTCTAGTTAGTTAGCTCAATTCCCATTATCAGTGAACAGCTTTAAAAAAAATATGAATGAGAGAGAAGGGCTTATATGATCACCCCTTCAGCAAAACCAAGTAATGTTCACAATCATTGTTTTAATTCACAATGAAAACAGATTTATGGAGAAATACAAAATTTACATAACCTCCATTTTATAATAGAAAAATCAGCACTGCCTTTTAGCCAAGATCATTATGGCATAACTGAGTGTTTACACAGAGGCACCTCTAATCTCACCCTGAAATTGGCACATGGGTAGGATTCCTAACCAAGCCAACGTGCATTTTGGTCTGAGTGCATCAGATTATTGATCAGTCAGTTTTAGGCTTTTAATTTTTCTCCATAGATGGACTTTGCCCTATTACTAATTAGCTTTTTCTTTGGAGGATCTGCATTTTAAGGTCATGAGTTTATAAACTCTTTTTGAATTGTATAAGATATTCAGTGAATTATAAAGGAATTCATAGATTCTTAACTGCTTTTCCTATTTTGTTCTGGATTAAACAAATTATTCACAAGGAATGTTAGAAATCCTAGGTAAGTTTGGGGAGCAAATAGCATAAGTAAGTAGCACTGTGAGTCCCTCTGTTATTAAAATTTAGAGAAACTTGATGGTTTTGATTTCATGAATGCCCTAAGGTCAGAGATGGGAGAAAACAATGAGATGGGAGAATCTAGCCGGGACTCATACTTGATGGCTGCTCACTAGTTGTATGGAGACTACTGCTAAAAGTTGAACTTTCAGATTAGAAGACTACTATAACTGACATCAATATATAGTATATGCATTTTTTTTTCATTTCCC EMBV3_19273 TTGTCCCTAATCATGCTGGCGGAGGTGGCTGCAGTCGTTGCTGGCTATATGCTTGAAGAT Gene GeneID:539562|LOC539562:XM_002700363:55_cdna Constitutive 0 NULL GeneID:539562 X GENE LOC539562 NULL similar to CD63 antigen EMBV3_17931 GCCATCAGAAGTATGTTAGAAGACATTGAATCATCATGAAGTGAACTCTACTTTCAGCCC Gene GeneID:541083|HBS1L:NM_001046498:41_cdna Constitutive 0 NULL GeneID:541083 9 GENE HBS1L MGC137542 HBS1-like (S. cerevisiae) EMBV3_24780 ACAATGGCCTCCTTGGGCTGTGGCTTTGTGGTTGGCTGTGGTCCAGTGTGTTGCTGTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30590 GGAAGGAGAGATTTTGACATGCTTAGGTGTATGCTGGGAAGAGTCTATCGACCTTGTTGG Gene GeneID:508013|PMCH:NM_001080240:965_cdna Constitutive 0 NULL GeneID:508013 5 GENE PMCH NULL pro-melanin-concentrating hormone EMBV3_08822 CCCACTGCTTTTGAATCCGAGTGGACACAGGACCAGCAGCCCAGTGTTGAGCAACCTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31289 CTACTGGCTGTGCTATGTCAACAGCACCATCAACCCCATGTGCTACGCGCTCTGCAACAA Gene GeneID:281684|CHRM1:XM_002699297:247_cdna Constitutive 0 NULL GeneID:281684 29 GENE CHRM1 NULL cholinergic receptor, muscarinic 1 EMBV3_13288 GCAAATCCACCCTGTTTGCTGTCCACTGTTCAGTACATCAGTAGCTTTTATGCCAGCTGT Gene GeneID:539646|GAPVD1:NM_001102520:41_cdna Constitutive 0 NULL GeneID:539646 11 GENE GAPVD1 MGC139096 GTPase activating protein and VPS9 domains 1 EMBV3_36833 ACCATCGTGGGTGTGGAACAGACTGCCAAAAGTTTAGACCTAACCCGGTACTGCTTCCCT Gene GeneID:535018|TARBP1:XM_002698809:36_cdna Constitutive 0 NULL GeneID:535018 28 GENE TARBP1 NULL TAR (HIV-1) RNA binding protein 1 EMBV3_30110 CAAACTATGTGTGGATTGGGCTTAACTTTACTTCCCTGAAAAGAACATGGACCTGGGTGG Gene GeneID:613393|KLRF1:NM_001099120:61_cdna Constitutive 0 NULL GeneID:613393 5 GENE KLRF1 MGC152582 killer cell lectin-like receptor subfamily F, member 1 EMBV3_33464 AGGGGTGCGCCCAAGCGGGGCTCAGGCAAGGGGGCTGAGGGCCAGAAGCCAGGATTCGGC Variant GeneID:618684|MBP:XM_002697647:38_cdna 677^931 2 EMBV3_39545 GeneID:618684 24 GENE MBP NULL myelin basic protein EMBV3_43494 CGGACAGACCCAAAGACATAGAAAACAAACTTATGGTTCCCAAAGAGGAAAGAGGGAGAG Gene BVT0101_049772 + 0 NULL GK000013.2:23556029-23709227 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36291 TCGATGGTACAGAGGAAGAAATTAGCGGGGCGGCTCGCTGAACTGTGGGTACAGTCTTCT Gene BVT0102_412213 + 0 NULL GK000007.2:17187169-17211605 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215771 TCONS_00215773 1 XLOC_131064 NonCoding TCONS_00215771 XLOC_131064 NonCoding NonCoding - 7:17202929-17204206 - TSS161074 442 1 TCONS_00215771_1 38 2 0.655172413793103 1.94189982417758e-42 0.000204605124000692 0.000481542278785613 0.00260946130009871 0.000234572407431612 0.000428286636201513 0.00017962794495628 9.3671947213213e-05 1.16232346389238e-08 0.00102648218455604 0.00251087825110867 0.000496626345083799 7.78992486615083e-05 0.00128791884865172 8.88001831802308e-05 0.00131460133062441 0.000563424731715785 0.00266803798923621 0.000117193039819062 0.000766938575280123 4.12089660176551e-05 0.000822654530742568 0.000992341839589918 0.000121340491703448 3.13505519305703e-05 0.000115466614381599 0.000106048006961647 0.000700603864704811 0.000257309135692164 0.00125478393410272 NM_001098384.1 LOC522449 Bos taurus uncharacterized LOC522449 (LOC522449), mRNA. 1e-167 592 100.00 0.739819004524887 NM_024341.2 ZNF557 Homo sapiens zinc finger protein 557 (ZNF557), transcript variant 3e-09 66.2 82.81 0.142533936651584 0 noncoding 0 0 0 0 0.0572423969117026 0.637898007991787 0.00497383720466268 0.915037477176956 ACAACCGAGCCCTCCAAGCTTGGTTCCGCCCACAAGCTGGTACCCGCCCACAGCCCCGCCCCTAGAGCCGGTTTCAGTCCCTGGCTCTGACCCACACTACCGCCCACCCTTGGACTCACTACGCAAGCGAGAACGCCTCGTCCGAGGCTTGGGTGCAAGGCCGCAGTCGCCCGCCGCCTCAACCCTGTAGGGCCCCACTGTCCGCGGAGGCTAAATGCCGGAAACTGAAGCCCCTGGTCCAGCCCAAGACCGGAAGCGGAAGCGTCGATGGTACAGAGGAAGAAATTAGCGGGGCGGCTCGCTGAACTGTGGGTACAGTCTTCTCCGCTGGGGGATTGGATTCACGTGACAAGTAAATTATCTTGGCGTTCAAGTCTGAGTTGAAACCAGTCTCAAGGTTCACCTGTTCTCATTGACACGTGGATTTCTGTGTGACCAGGTG TCONS_00212114 r 5' 0 TCONS_00212114 r 5' 0 EMBV3_14532 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25347 GGGGAGGGAATGTTCCTTGGTAGTGAACACGTTGGGGAATAAAGCACTAAATCCAGCCCT Gene GeneID:540987|LOC540987:XM_002689210:116_cdna UTR3_Alt 2 NULL GeneID:540987 7 GENE LOC540987 NULL similar to Uncharacterized protein C5orf5 (GAP-like protein N61) EMBV3_19143 GGCTGTTGGAGCCTCGATTCACACCAGCTTCATATCTAGTCGCTCCTTCTGTGGCACTAA Gene GeneID:521903|LOC521903:XM_002699166:54_cdna Constitutive 0 NULL GeneID:521903 29 GENE LOC521903 NULL similar to olfactory receptor Olr1329 EMBV3_42921 GAGCAACAGCGCCAAGGCCGCCATCACCTTCTCTTTCTTCTCCATCCTCGTCTGGATATT Gene GeneID:538683|SYNGR4:NM_001046436:346_cdna Constitutive 1 NULL GeneID:538683 18 GENE SYNGR4 MGC134137 synaptogyrin 4 EMBV3_25015 ATCAGGGTTCTACTTCACTTCAGTATGCAGCATTACCCGCATATCAGTTTTATTGATGTC Gene GeneID:538774|SUZ12:XM_002695636:57_cdna Constitutive 3 NULL GeneID:538774 19 GENE SUZ12 NULL suppressor of zeste 12 homolog (Drosophila) EMBV3_25338 ATGTCAACCCACAAGCCCTGAAAGTGCTGAGGACATCCGAGTTCATGCCCTACGTTGTGT Gene GeneID:535171|MPP6:XM_002686869:94_cdna Constitutive 0 NULL GeneID:535171 4 GENE MPP6 NULL membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) EMBV3_05415 ATCTCAGTTCTCTGACCAGGGATTGTACCCGGGCCACTGCGGTGAAAACCCAAAATCCTA Gene BVV0101_045273 + 0 NULL GK000024.2:36038239-36115486 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00789 AGTAGACTCAGCAGCCGGATAGATAGTGTTAAGTCGCTAGAACTCACCCCTCTGTCTGCC Gene BVV0102_195686 + 0 NULL GK000026.2:39651268-39653450 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152367 TCONS_00152365 TCONS_00152366 TCONS_00152364 TCONS_00152363 1 XLOC_092320 Coding TCONS_00152364 XLOC_092320 Coding Coding SFXN4 26:39651221-39666588 j TSS113655 3558 1 TCONS_00152364_1 278 0.164699269252389 12 0.769230769230769 3.44383328939526e-07 0.0016682766503472 0.00295782118196169 0.000989594942173871 0.00126598501199545 2.14283361290885e-05 0.00108195702481114 0.000467888280827222 0.000195026104089138 1.25276744508751e-05 3.86431663901205e-40 1.92733589332457e-32 2.7783894483984e-05 0.00040533118491574 0.000282696006248506 9.43621515254997e-108 1.93022535364923e-10 2.68618573312952e-12 0.00206493868333141 0.003229981541795 0.000349987391624109 2.54877511979814e-08 2.86403019619816e-09 6.78415534919659e-08 0.00256672642570548 0.00222030150010541 0.00201545141877218 4.74971234091005e-08 3.84198709949298e-05 3.70198574588418e-12 NM_001035060.2 SFXN4 Bos taurus sideroflexin 4 (SFXN4), mRNA. 0.0 1972 99.64 0.309724564362001 NM_213649.1 SFXN4 Homo sapiens sideroflexin 4 (SFXN4), mRNA. 9e-173 612 75.62 0.246767847105115 TCONS_00152364_1 sp|Q3T0M2|SFXN4_BOVIN SFXN4_BOVIN Sideroflexin-4; 0.0 516 94.83 0.971223021582734 1 coding 0 0 0 0 -1.06234703630322 0.0108420633197793 0.04216686951197 0.418726229508213 GTGTTTGTTATCTACCTTGCAGCAAATGGGGCTTTCCAGAGCCCACAAACATCAATCCCTTGAGGCAGCCTGCGGAAAGCTTGCATGTTTAACTTGGTTTTTCTAAGAACTTGTTGGGGCCTCTGAACTCACACCTGGCTCTGTTACAGTGACTTGGCTAATGGTGTGGTTTGCACACAGCCTGCTCCACTCTGAGCTGGGGGAGGCTGGCTGCATTCAGGGACTCCCCCAAGGGATACAAGAAGCTTGGAAGAGAAGTCTTTCCACAGTGCATCCTGACAATAGCAGACTAATCCCTGGTCCTTTTCGACCTGCAGCTCTCCTGCCTTTCACAGCGCCCACGCTATTTCTGTCAATGCTGCCAGTGAAAAGTCTGAAGTCCATGATTTTACCTCAGGCTTCCTTCTACACCTACAGTACAGCCTTCAACATCGTCAATGGAAACGCAAGCTATGATCGCCGTGCACACGAGAGCTTATTACTAGGAGCAGGAGTGATTGTGTCTTCAACTTTTTTGGGCTTATTCCCTCGTCTGCTCCAAGTAAGGCTTTCAATGAATAGCGTTCTGAGCAGAAACTTCATTCCCGTCATCATTCTTGCCCAGCTCAGTGGGATGAACGTGATCGCCTCCCGAAGTTTGGAGCCCATGCGTGGGATCGAGGTCATGGACAAGGAAGGCAATGTCATAGGTTATTCCAGAAAAGCCGGGACAAAGGCCGTTAAAGATACAGCAACATCCAGAGTTGTGCTGTTTGGGACCTCTGCGTTTATCCCTGAAGTCTTCGCATACTTTTTTAAAAGGACCCAGTTTTTCCTGCAGAATCCATGGTCACTGTGGACGCTGAAGCTTTCTTGTACTGTCCTCGTCATGGGATTGATGGTGCCAGTTTCCTTTAGTGTCTTCCCACAGATCGGACGGATACAGTGCAACGAGCTTGAAAAGGAAATTCAGTCAGCAACCGAAGAAACAGAACTCTTCTATAACAGAGGGGTGTAGGTGTGTGTTTTAGCTGCATTCATTTGGTTCCTGCGTGAAAACCTTCCTCTAGGGTTTCAGTGTCAAGAACCCTGCCAGAAGTGTCCTGGAAACCCCACAGGTGTCTGTGCCAACAGGATGGCTTACAATGACACCTGCCGAGACTGGTCCTGCCTCAGGTTAAACAGGCTTGGTTGGAAGAAGAGAAACGGGAGCTGTCCTGTCTGACACACGATGTGCAGTTGCTAAGGGGATGTGTGTGTGATGTAAGATTCCATTTTCTATTTGTTTGTCAGCCTGTGAAAGGATACTGTGAAATCACCAATAAACTTGTCTATAGAGTTGAGTGAAAAGGAAGGAGAAAGGTCCACGTGCCCAAAGCACAGGCATTAAACTGCTAGCCCACCTCCAGGTACAATGGTGGGGTGTGAGTGAAGGCCTTCCACCCCCAAAGCAATGGTGTTTGCCTTCTCAGCTTACTCCTGTTGGGACAGCTGCTTAAAACCTTTGCCAGCTGCTACCCAGCTCCTCCTTTCTCCTCCCTGGCAGATGACTCGTTTTCGCCCTCCACGGTGAAAGCCAAGGCTATCGGCCTCCCGGCATGAAGCCTGCTGACCTCCGTCCACCCACGCCCAGCCTCCCCTCCTCCCTGCGTGATCAGCAGTGTCCTGGGCTTGGGCCTGACCAACCCTGCCTGTTTCCTCGGGCCCTGGCTCTGCAGCCTTCACTGCCCCCTCTGGCTTCAGCCTCCCTCCTCTGCTTCTTCCCAGGAGCATTTCAACTGCATGAGTCACCTGGCTCATGAAAAAACAAACACCCCTCTGTGTAGCCAAAGTTTTTCAAAGAGTTTTCTGCCCTCAGTCTTTCCACCCCACCTTCCACTGCTGAGGCTGCTGTCATCCGTGCCCCCCAGTGCTGTTGACACGGCCACTGCCCACTGGGCAGGCCTGTCATGAGGCTGGCTCTCCCCTGAGCAACAGGCCCACATCCACTGTCCCCTGCACTCTGCCATCCGGACATACATTTGGGAGCATCTTTCCGTCCCAGTCTCAGGAAATGGCACTGCCACTTACCAGCTTAGGACCACTGGCATCACCCCCTACTCCCCTCCTCCCCCCACCCCATTCAGTAGACTCAGCAGCCGGATAGATAGTGTTAAGTCGCTAGAACTCACCCCTCTGTCTGCCACCACCATGGCTCAGTCCAACAGCATCCCCTGCTGGTATTGCTCATCAATCCATTTCTAGCCTGCTCTTCTAAACCACACCTGCTTAAAAGCCTTAAATGGCCTCCCAGTACACCAGGATGAAGTCCAAATTCCTTGCCACAGCAGGTAGAAGACTTTATTCCTCTCTTGCCACTCCCCCTCCTCACTCTGTACTGACATCCATCAGTGTCTCTGAGCCTTCCCACACGCTGTTCCCTCTGTTCCAGGTTAACCTCTCCCTGGGCTTCAGGTCTGACTTGGATGTTAATCACTTTCCTCCAGGGAGCCTTCCAGGATTCGCAAGACTGAATTAGGTGCCCCTCCAATGTGCTCCCATAGCGCTCATGTCTCGCCTAGCACTTGCCACACGGCCATGCCATGGCCTGTTTGCTGACCCTACGCCCCCACAGATGGTGCATCTTGAGAGTAAGAACATTGTCGTGGGCATCAAGGAAGCCCCAGGATGCGATACACAGAGCACAGTGTAGAGCAGGCACCATGCTTGTGTACCGGATGGAGGATGTTTCTCACACACCCTGCCGCAAGTCCTCTCTGAACACACCTGGGGGGCTTCCCTGGGGGTCCAGTGGTTAAGAATCTGCCTTGCAATGCTAGGGACACCGGTGTGATCTCTGGTCTGGGAAGATCCCACAGGCTGTGAAGCAACTAAGCCCGTGCTGTACAACTAGAGCCTGTGCTCTGGATCCTGGAAGCCGAAACTACTGAAGCCCGTGAGCCCTACAAGCCCACGCTCCACAGAAGTCACCGCAGTGAGAAGCCCTCATGCTACAATGAAGAGTGGCCACCGCTCACCGCAACTAGAGAAAGCCTGCATGCAGTAATGAAGACTCACCACAGCCAAAAAAGAAAATCTTAAAAAAGAAACAATGCACCTGTGGCTTTCAGTTTTCCCTGGGCCACAATGAGAGTTATCTCCAAATTTGGTAAAAGGTGTTTCAGCACAGCCTAGAAGGACAAAACCAGTCAAAATGATCCACCAGTCAGCTCCATGTCGCCACAAGTTCCTACTGAACAAAATGACAAATGTGCAGAGGCTCCAAGGGAAGATTTAGCCACTGATCGAGGACACAGCAGTGACGTGAGGACATCTTTTCCAAGATGACACTTGGACCTTACAGTCAGCTCCAGGAAGGGGGCGTGGAGGACCGGGTAAGGAGAGAAGGGCCAAGGCAGGGGTGGAAGGAGCCAGACTGCTTGAACACTCAAATAGGTCTTCGGATAATCCCCAGGGGGTCCACATTTGACAGAGAGGGTTTTTACTTTCGTTTGGTTGGAGTGCGGAGAAAGGGCACAATTTATGCCTGAAAGTGCTGAATATCAAAATATTTCACTTTATTTCTGTATCATAAATTTG EMBV3_04304 CAGGGAATCTTGCAGGTTCTATCAATCCCTGCTAGGTAATGTGCTCACCAGGAGAAGTGG Gene GeneID:540871|MARCH9:XR_083675:124_cdna Constitutive 0 NULL GeneID:540871 5 PSEUDO MARCH9 NULL membrane-associated ring finger (C3HC4) 9 EMBV3_31907 TCTGAGAACATCTCCTGCCATCTGACCTGTAGTTAGCATCCCTAGGCCTCTCCTCAACTG Gene GeneID:282038|RLBP1:NM_174451:71_cdna Constitutive 0 NULL GeneID:282038 21 GENE RLBP1 CRALBP MGC139195 retinaldehyde binding protein 1 EMBV3_29306 CGGAATACGCAAGGTTTGAGAATGGCCGATTTGTCTACCGAATAAACCGCTCCCCAATGT Gene GeneID:536560|TEAD1:XM_002693050:335_cdna Constitutive 1 NULL GeneID:536560 15 GENE TEAD1 NULL TEA domain family member 1 (SV40 transcriptional enhancer factor) EMBV3_11374 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34558 GAGGCAATTGATAAACGCTACCTTCCAGATGATGAGGAGCCAATAACCCAAGAAGAACAG Gene GeneID:540660|CDC27:NM_001105428:281_cdna UTR3_Alt 2 NULL GeneID:540660 19 GENE CDC27 NULL cell division cycle 27 homolog (S. cerevisiae) EMBV3_08377 CTACATCAGCCTTGAAACAAGTTACTAAAGTTCTGTTCACAAAAGGAAGCCACTGCCTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13062 CTACATGTTCAAACGGGAGCCCCCAGAGGGATGTGAGCGAGTGAAGGTCTTTGAGGAAAT Gene GeneID:541048|GLCCI1:XM_002686688:106_cdna UTR3_Alt 2 NULL GeneID:541048 4 GENE GLCCI1 NULL glucocorticoid induced transcript 1 EMBV3_07454 CAACCCTTTTGGCCTACCTGAGAAGAAAGTCCACTTTTCTGCCAATGCCTGCCTGGCTCC Variant GeneID:280960|XDH:NM_173972:2_cdna 168^264 1 EMBV3_03174 GeneID:280960 11 GENE XDH NULL xanthine dehydrogenase EMBV3_17969 GGAGGAATCTCTTGGAAACCCCTTGGATCATGACATTTAGGGAAATCAGTCCTCGGATTC Gene GeneID:536914|CCDC147:XM_002698500:595_cdna Constitutive 0 NULL GeneID:536914 26 GENE CCDC147 NULL coiled-coil domain containing 147 EMBV3_17797 CTTGCTTGGGTTTCTCTTACCCTGGACGTGGGGTATCTCTTCACAGCTGCTCCAGCAAAG Gene BVV0102_109262 + 0 NULL GK000009.2:3675946-3952255 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00239607 TCONS_00127857 TCONS_00011186 TCONS_00054228 TCONS_00111518 TCONS_00127862 TCONS_00220528 TCONS_00030239 TCONS_00127867 TCONS_00122055 TCONS_00252457 TCONS_00252981 TCONS_00071094 TCONS_00199688 TCONS_00056839 TCONS_00008744 TCONS_00239608 TCONS_00116154 TCONS_00127856 TCONS_00047004 TCONS_00127866 TCONS_00142407 TCONS_00031590 TCONS_00127859 TCONS_00230012 TCONS_00127858 TCONS_00141074 TCONS_00099558 TCONS_00080305 TCONS_00158120 TCONS_00239735 TCONS_00071445 TCONS_00111172 TCONS_00127864 TCONS_00175858 TCONS_00232046 TCONS_00240839 TCONS_00177096 TCONS_00127865 TCONS_00209739 TCONS_00007796 TCONS_00240157 TCONS_00197301 TCONS_00127861 TCONS_00007110 TCONS_00090445 TCONS_00197464 TCONS_00127863 TCONS_00127860 TCONS_00250494 38 XLOC_146273 XLOC_077770 XLOC_006737 XLOC_032037 XLOC_067418 XLOC_133845 XLOC_016493 XLOC_073611 XLOC_155398 XLOC_155922 XLOC_042867 XLOC_121340 XLOC_034642 XLOC_004301 XLOC_070323 XLOC_027141 XLOC_086832 XLOC_017838 XLOC_139506 XLOC_085502 XLOC_059801 XLOC_049189 XLOC_096574 XLOC_146400 XLOC_043216 XLOC_067072 XLOC_105637 XLOC_141533 XLOC_147503 XLOC_106870 XLOC_128250 XLOC_003356 XLOC_146821 XLOC_118963 XLOC_002672 XLOC_055226 XLOC_119125 XLOC_153437 Coding TCONS_00127864 XLOC_077770 Coding Coding CMTM6 22:7000109-7045851 j TSS95552 5909 2 TCONS_00127864_2 144 0.25672702656964 5 0.87092542795304 0.000135997473202085 1.5266578293948e-34 0.000293158596115872 0.000579425315914317 0.00186521070546513 0.00014049104033077 0.000308174759500863 0.000156865643680567 0.00119391622913127 3.18833576103658e-06 1.95992798992842e-27 4.724203069934e-304 6.43019216479513e-118 2.68569756637515e-05 7.99719865614375e-05 0.000273357543897591 0.000686981905794835 0.00121006427440044 9.06110091061503e-07 1.73625070058064e-09 0.000185831959916375 0.000516279723489613 0.000199154581354868 0.000326604871933919 0.00021482763397178 0.000580763027414144 0.000362343343119703 9.67735018573644e-25 2.33156165787442e-13 0.000471574217951556 NM_001035066.1 CMTM6 Bos taurus CKLF-like MARVEL transmembrane domain containing 6 (CMTM6), mRNA. 0.0 4821 99.85 0.454053139279066 NM_017801.2 CMTM6 Homo sapiens CKLF-like MARVEL transmembrane domain containing 6 (CMTM6), mRNA. 5e-141 508 67.09 0.24775765781012 TCONS_00127864_2 sp|Q9NX76|CKLF6_HUMAN CKLF6_HUMAN CKLF-like MARVEL transmembrane domain-containing protein 6; 5e-61 190 73.48 0.909722222222222 0 coding 0 0 0 0 0.0973072867151918 0.38198452521468 -0.00436762527534884 0.925482282781871 AAGATCTGTCAGTATTTTATTTAACTTCATAGGATTATTAAGCTTTCAACTCTTCTAAGAGACAGGTAAGTACCTGAGATTACTGCCCTGTAAGTCTCCTTAAATTAGGAATTTACCTTGATCAGTACATCTTCCCTATCAGCATGTCTTGAACTATCAAATCTAATGTCAGCCTTCCTCACAGAAACAAATAAAGCCTTCTTTTAGTCATCCTTTAATGGGCAGAAGCTGTTTTAAGAGTTTGGCGCGTTCACACGGCTGCTCTTCCCGGCCCTTCCAGGTCAGGTCACCTGGTGGTGGTTTCCGCTTTGGAACATTGGTAGCGACAGTTAGATTTTCATACTGATGTCAGCTAAAGGGCGTACGTGCATTTGACCTGTTGCTTAATTTCAGATCATTGAGGGGAAACGGTTACTGCTGTTTACATCGGTCTTTGTTATAACTTTATAATATATATTCCTAAGATGTTTTTTCCACAAAATGTTTGAGGGCAGTTCTTCTACTTTCAAACGTAATTCTTTCATTATAACTTTAAAATCTGTTTAGTTTAGTTTTATAGTAGTGTTTGGCTCCTAATGGTTGAATGTAAATACTAAAATATATGAGAGGGTTATAATTTGTTTCAGTGTGGGAAAAACTTAGGGTGTTTGTGGGCATGGAAAAATTAGTTTGCAAAAGCATTTTGTTTGATAAAATGAGGGGGCAAATGCCGTTGATAAAATCTTAACGATTCTGCAGTTCTGGTGTTGTGAAGGCCGGTTTGCCTAAACTAGTTGTACTTGAAGTAAGTGAAGCCGCTGAAGAGAATTGCAGACCGTGCTTCGTGGTATACTGTGGCATGTCTGCTGTGTTGCATGTCTAGACTAACTCATGGTTTTTTGTTTTTTTTTCCTGTGTACATTGGAGATATACTAGAAAACCCTCAGAATTGCTTTGTTACCTGAATTAATGATAACTGTTCACTTTATATGAGGTTCAGTTTTAACTAATTGAAGATCTTTTGTTTACTGTGGTTGGACTTTAAACCTTTTTTGGTCCCAATTTTAGCAAGGAAATTTGTTTTTAAACTACTTAAATTTTTTTGTTTTTTAGCTCTTTTTAATTGAAGTACACAGTACAGAAAAGTAGACAACTTACAGGTGTATGGTTTGAAATACCACAAAGTGACCACATATAACCAGCACCAGCATCAAGAAAGACAACGTTACTGCTTCTAGAGGCTGCCTGATTTCCTTGGTTCCTGGCCCCCTGTCCATCTTCAAAGGCAACAGCGTTGCATCTTCTAGTCTCTGCTCCCAGCACACCGCTTCACCCTGACCCTGCTGCTTCTGCATATCAGGATCCATGGGATTAAATCTGGCCCACGTGCTGTCTCTCCTGGCCTTCATCTGTGAGGAGGTTGTGTCGCAGTGCACTTTGTGTGGAGGACTCTACTTCTTTGAGTTTGTCAGCTGCAGCGCCTTTCTGCTGAGTCTGCTTATCTTGGTTGTGTACTGCACACCAGTGTACGACAGAGTCGATCCCGCGAAAGTCAAGTCATCGGACTTTTTTATCACTCTGGGCACAGGACTGGTGTTCTTTGTGGCATCCCTCACTTTCACTTTGACACATGACAATACCATAGCTGAAATTGCTGCAATCGTGTTTGGGATGTTAGCAAGTCTTACATACCTGGCTGAGTTCTCCTTTATGCTCCGTGAAAAACTTAAAGAGCCCCGGCCGAGAAAAGGGGAGGCCACCATGAGGAGAGAGCACCTCACCGAGCCTCTGAATGCTTGAGGGGACGGGTGCGCGAGGTTGCCGCGGGGCGCGGCAGCTCCTGTAGACCCTGGGTCCGTGTTAAACCGCTGATTTTTGGAGAGCAAGGCAGGACGGCAGTTTGATCAGTATTGATTGGACTGTGTATCAGTCACCATAAATAAGGCCAGAGGGCTTTAAAAAATTTTTTTTGTAACAGTTGAAACTTGTGTCAGATGAAGTTTTGTTTGGAGGTAAGAGCAGCTGTGTCTTTAAATCACATAGCTCAACTGATGATAAATTATTCCATCATTGTTACTAGGGTTAGGTTTGAAATTATGCTTTATAGCTGTATAAACAGCGTGATGAAGTTCATCCATTTATAAATGGTTTCACTTTTAATTTGCTTAGCTGTGACTTTGCTTTTTGATGACTAGATACAGTTTAATGTATATTTGAGATATTATTTTAAATGTTGGTCTACGTTTTTCCCTTACACATGTAAAACCCAGGCTTTTACCATATCTCACTCTGCCTTAAAATTATACTGTAACGTTTTAGGATATAATTATTAACTCTTTCTGAGACCTTTTATAGCCTAATAGAAAATGTATGGGAGATGCTGATATTTTACATGTTATAAAAGCAACAATGTCAGCAACCCCATGTAAAAGTACACATAGAAAAACGGAAGAAGCCGCTACCCTAAGGACCAAAGATCCGCGTTTGCACAGTGCAGTTCTTCACCACTGTTCAGTGTCTGAAGAGATGAGTTCATTCCATGAGACAGAAGATGGTTCACTCCTTTTTGCCATATGATTATTTCTCCTGAAATTAAGGTTCTGTTCAGTGTTTTCTTGGGAGCCCATCTTACTTTAAAACCTCAACCTTTGATTTTTGATTTGAGAGCTTCCCCGCTCTGTCTCCTTACCAGGATGGGCCAGGTACTGCTCCAGCAGCCGGCAGAGGTGGGCCTGGGGCTCTGGCTGCTCGATGGCAGCTTCTTCAGATTCTCAGGCCTGTCCAATTGCAGAGACTCACAGCAGGATCTTTAGGGTTCTTGTTCCCACACAGATGTTGCCCTAGTTTCTCTTCAGAGGAGACCTTAAGGAAGGGAGTGCCGAGACACCTGCCCAGCTCAGTACTGTTGATGGTGGAAGAGAGTGCCAGCCCACCCTCAGGGGAACTTCACAACCAGCTGTAATCGAAGAACTGTTTGCTGCCAGCAGGCTAACTTAGAGCCAGCCAGGGCACTTTGAATGAGACCGTTCTTAAGGGAGGTCTTTTTATAACGGGACCTTTCTAACCAGGTGCTTCCCAGGCTAGACCTTGCTTGTCCTCTCGTGGGGAGTTTTCACTTGACTCCAGCGTGGACTCTCGTTGCCGGTGAGATAGGCTAATGACCCCATCCTTAATCTCATCTGCCGCTGTGTCATGGATGGTTTCAGACAGATGCCCAGACACAAGCTCTGCTGTCTTCCTGATGCAGACCCTTATCCGTTTGTGGCAGTTTGGTTGCTAGTGGCAACGTCACCACTGCCTGCTCGAGAGATCGTGCAACCAGTCGAGGATGCTCTGTGTGTGTTCACAGGGTGTGCTAAATAAGGAAGGAGAACTGGTGTAGGTCTAACCCAGGTTCACAGAGAACCAGCTTGTGGAAGGTAGGTGCCGTGGTCCTTGTATCACCTCTGCCCAGCTGGCACTTGCGGCAGACCATCTGGGCGCCCTCAGGGTCCCCGCTTGGGAGGTTGAGGGAATGGCCTCAGCGGGCCGGTGCGGAGCTTAAGCTCTCCTTGTCCCGAGGTTTCACTTCGCTTGTTTCACTGGCACAGAATGGAGCTCCTGGCTGGCCACCAAAAGATACTACTTTCACGGGTATTTCAGGTCATCCTAGAACCTTTCTTCACTTTTTTTTTTTAAACAGGACCCACGACTAATTAGCCTCCATCTGCTTTGGTAGGAGTTAGAAGTAAAAAGATCTTTGTGGTCAATAAAAATTCAAGGAGAACTTGAAACCAAAGCCACTGTTACAGAAAAGGGCAAACTCAAATGTAAATTAATTTCTTATTAATGGTTATGGTAAATTTATGTAAGTAGACCTTTGAGAACAGTTCTTTTAAAAGGGAAGTGTGCATACAGTGCAGATTTTATAATTGCTGTACTTAAATTATGTTCTGATGGGGGCTGGGGAATGTATTTTTACAGTGTTTATAGCCAATCAGTTTATATTTAATAATTTTAAATCCTGTGGGTCTTTTGTGTCTCTGTGTCAAATTTTATAGTCTTTCTAAATAAATCGACTTCACTGTTTACACCTTTGTAGTTGTTTATTTATTACAGAAGCATAGTGTTTAAATGAATGTGTTCTCCAGACTTCTAGGAGTTGGTTTTACAACCTGGGAGAGAATACTGGACTTTGGATCTGCCAGGGCGTGGGCAGGGAAAACCATGTCCACCTGTGGGCTCTCCCTCTTGGAGAGCTAGAACACACATTCAAACCACATCTCTAGGGAACCACGTGTGAAGAGTTACAAAAGAATGTTGTGAACTAAAGGCCTTCAAATACTTCCAAAGCAGCAAATTTGGACTCAGTCCCGTTTCCTAGTATGGGTAACAGTCCCCCAAACAAGCTCATTCTCGTTCAGGCTGTTCAGTGACTGGGAAAGTGAAGCAAAACTAGGATGGTTCTGGTAAAGCTACAGGTATTCGTGTAGTTTGCAAAATTCCTGCCTCCAGACGTATGAGAATAACAAGATCTTTAGAGTCATCACGAACTCACTGGAATTTGTACATTCTTCAGACCTCTGTGTTTTGATAAAGAGCATGATTTTATCAGCATACAATCAACTACAAGGAGCAGAATATCTAACTAGGTGGGTCTTAAAACACTTAGAAAGTGAAAGTCACTCAAAAAGAGTGTCCGACTCTTGGCGACGCCATGGACTACACAGTCCGTGGAATTCTCCAGGCCAGAATACTGGAGTGGATAGCCCTTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGACTGAACCCAGGTCTCCTGCATTGCAGGCTGATTCTTTACTGACTGAGCTACGAGGGAAGGCCTAAAACACTTCAGCACTAAGGAAAATTTATTTCACGAGAAGGCTGGGTGGTTCAGTTCCACAGGTGATAAACTGAGTGGCCGAGGAGTGTCGCCAGGGACCCGTGCTCTTTCCATGTTTTCCTGCCCATCCTTCTGTTTCTGTCCTCTGGGTTGACTCTCTGGCTGCCCGGGCGCAGGAGGGCCTAGACGAGCTACTCCATGTTCAAGGTCAGGAGGGGCAGCGGTGAGGAGATACCCCTCGTCCAAGGAAAGGAGCAGAGGCTGCGCTTTGCTGGAGCAGCTGTGAAGAGATAACCCACGTCCAAGGTAAGAGAAACCCAAGTAAGACGGTAGGTGTTGGAAGGGCATCAGAGGGCAGACACACTGAAACCATACTCACAGAAAACTAGTCAATCTGATCACACGGACCAGAGCCTTGTCTAACTCAATGAAACTAAGCCATGCCATGTGGGGCCACCCAAGACGAGCGGGTCATGATGGAGAGATCTTACAGAACGTGGTCCACTGGAGAAGGGAATGGCAAACCACTTCAGTAGTCTTGGCTTGAGAACCCCATGAACAGTATGAAAAGGCAAAATGATAGGATACTGAAAGAGAAACTCCCCAGGTCAGTAGGTGCCCAATATACTACTGGAGATCAGGGAACAAATCACTCCAGAAAGAATGAAGGGATGGAGCCAAAGCAAAAACAACACCCAGTTGTGGATGTGACTGATAATAGAAGCAAGGCCCGATGCTGTAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACGAGATGGCAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTAAAATGGACTGGAATGGGTGAATTTAACTCAGACAACCATTATATCTACTACTGAGGGCAGGAATCCCTCAGAAGAAATAGAGTAGCCATCATGGTCAACAAGAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATAATCTCTGTTCGTTTCCAAGGCAAACCATTTAATATCACAGTAATCCAAGTCTACGCCCCAACCAGTAACACTGAAGA EMBV3_20031 TAGAGCTCCCTGAAACTACAGAAGCTTTAATTAATATGCAAACAGTTGGTGAAAAGTGGT Gene BVV0102_043810 + 0 NULL GK000017.2:13329389-13333860 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076702 TCONS_00076703 TCONS_00076701 1 XLOC_046896 Coding TCONS_00076703 XLOC_046896 Coding Coding ABCE1 17:13332164-13364710 = TSS57531 4096 1 TCONS_00076703_3 599 0.085693359375 18 0.874696573974497 0.00334244857710505 0.00416034789628147 0.000406285988014289 0.000514307783701902 0.00147083659350418 0.00066029104117082 0.00140635675547538 0.00125202819004638 0.00385486188259844 0.000261051853822886 3.41763147028371e-07 0.00097478319236379 2.23942360091752e-05 0.00337285787928375 0.000849980744617386 0.0229515957821961 0.0109577026063302 0.0211913552626753 0.000875375948200778 0.00175229714418579 8.93893510025652e-07 0.00649293424430429 0.0130619339668509 0.0178281284742202 0.000879850016635682 0.000325149911607552 9.20296159853499e-07 0.00253682447429561 0.000972535482864521 6.35863894189297e-06 XM_005217499.1 OABP PREDICTED: Bos taurus ATP-binding cassette, sub-family E (OABP), 0.0 7211 99.33 0.98974609375 NM_002940.2 OABP Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1 0.0 3719 87.87 0.7265625 TCONS_00076703_3 sp|P61221|ABCE1_HUMAN ABCE1_HUMAN ATP-binding cassette sub-family E member 1; 0.0 1236 99.83 0.998330550918197 8 coding 1 1 0 1 0.447988517009055 0.117780954377352 0.0110720440149498 0.819989855834251 CCGCCATTTTGGCCGGTGGCCGCTGGAACACGCTGTGTGGCTGAGAAGTGAAAAGCAAGCGCCGATTTGATCTCTGCGTTCCCCTCCGCAAGGGGAATCTGTTTCTCCAGAGGAACTGGATATTCTTACTTCCTTAGAATCATGGCGGATAAATTAACAAGAATTGCTATTGTCAACCATGACAAATGTAAACCTAAGAAATGTCGGCAGGAGTGCAAGAAGAGTTGCCCTGTGGTTCGGATGGGAAAATTATGCATAGAGGTTACCGCCCAGAGCAAAATAGCTTGGATTTCTGAAACTCTTTGTATTGGCTGTGGTATTTGTATTAAAAAATGCCCCTTTGGCGCCTTATCAATTGTCAACTTACCAAGCAACTTGGAAAAAGAAACAACACACCGATATTGTGCCAATGCCTTCAAACTTCACAGGTTGCCTATTCCTCGTCCGGGTGAAGTTTTGGGATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGAAAGCAAAAGCCAAACCTTGGGAAGTATGATGATCCACCTGATTGGCAAGAAATTCTGACTTACTTCCGTGGATCTGAATTGCAAAATTACTTTACCAAGATTCTTGAAGATGACCTAAAAGCCATTATCAAACCTCAGTACGTAGACCAGATTCCCAAGGCTGCAAAGGGGACAGTGGGGTCTATTTTGGACCGAAAAGATGAAACAAAGACACAAGCAATTGTATGTCAGCAGCTTGATTTAACCCATCTGAAAGAACGCAATGTTGAAGATCTTTCAGGAGGAGAGTTGCAGAGATTTGCCTGTGCGGTCGTTTGCATACAGAAAGCTGATATTTTTATGTTTGATGAACCTTCTAGTTACCTAGATGTCAAGCAGCGTTTAAAGGCTGCTATTACTATACGATCTCTAATAAATCCAGACAGATATATCATTGTGGTGGAGCATGATCTAAGTGTATTAGACTACCTCTCTGACTTCATCTGCTGTTTATATGGCGTACCAAGTGCTTACGGTGTTGTCACTATGCCTTTTAGTGTAAGAGAAGGCATAAACATTTTTTTGGATGGCTACGTTCCAACAGAAAACTTGAGATTCAGAGATGCATCACTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTATGTATAAATATCCTGGAATGAAGAAAAAGATGGGAGAGTTTGAGTTAGCGATTGTAGCTGGAGAGTTTACAGATTCTGAAATCATGGTGATGCTGGGGGAAAATGGTACTGGTAAAACAACATTTATCAGAATGCTTGCTGGAAGGCTTAAACCTGATGAAGGAGGGGAAGTTCCAGTTCTAAACGTCAGTTATAAGCCACAGAAAATCAGTCCCAAATCAACCGGAAGTGTTCGCCAGCTACTACATGAAAAGATCAGAGATGCTTACACTCATCCACAGTTTGTGACTGACGTAATGAAGCCTCTGCAAATTGAAAACATCATCGATCAAGAGGTGCAGACATTATCTGGTGGTGAACTGCAGCGAGTAGCATTAGCTCTTTGTTTGGGCAAACCTGCTGATGTCTATTTAATTGATGAACCATCTGCATATTTGGATTCTGAGCAAAGATTGATGGCTGCTCGAGTTGTCAAACGTTTCATACTCCATGCTAAGAAGACAGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCAGATCGAGTCATTGTTTTTGACGGTGTTCCATCCAAGAACACAGTTGCAAACAGTCCTCAAACCCTTTTGGCCGGCATGAATAAATTTTTGTCTCAGCTTGAAATTACATTCAGAAGAGACCCAAACAACTACAGGCCAAGAATAAACAAGCTCAATTCAATCAAGGATGTAGAACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAAAGTGAATCGGAGAATATTGATAAGCCATTTATTAAGAGAAACATTTATTGGGATTTTTGTCATATAAAATTTAAATCAGGTTTTATACACCACATGCTCTAGAGCTTGAAGTATAATTTACTTACTGTAACATCAAAAGCCAGTTGTGTTATAAATTGTCTGAATACAGAAAATGCCACTTTTCTGATCTTGATGATAGAACCCTTTTTGTGCATAACATTCTAAAATGAAGACATTTCAAGCTATACAAATTACCTCCAGGTTTCCATAATGTATAGGAAGATTTTCAGTAGGTTTATTATATATTCATGTACCAAATGCTGAGCAGTGTTGCCCCCTTTTAAAAATCTTGAAAAAGGTTTCTGCACTTACATGGTTTGCCAAGTATGCAATTATAATGAAACTGCCCTTATTTTAAAATCCAATTGATTACTTCACTGATTAAATTTGATAAACAAACATCAGGATTATATTTGTTTTTAGTCTTTGCATTAAATTGTCAGTGTATTTAGGCTTTGAAAGGAAGATGACTGCGGAACAGCACTGCTGGAAACAAACTATTACCAACTTCAGCATTGTTTACAGTGTTTTGGTGCTTATAAATATCCTAAGCAAAAACAAATCATTTCAACACACGTTCCTCTTCCCCACCCCCCCAGAAAAACCTAAGTTGATTCTGAATTAGATGTAGCATTCCATAAGATTCTATATTCTGTAGTTACTCTCAAGGTAATGTCATTCTTTAAATATACCTTTCTGTAATCACTGATCAAGATTTAGAAAAAAGTATTTTAAAGAATGTTTGTTTCCCTTAAAAGTACAGTACAGGTTCAGAAATCTTTAGAGTTGGTCCCTAAGCATCTGTGTTTTTAAACTTCCACAGATTTCTGATGGGCAGCCAAGGACTGTGAGCCACTTTCCTGAAGGCAACAATACCGCCAAGGAATGCCCAGATAGCAATACAAAGTATCCCTTGGTACCAAATATATTTATTTCTAGGTTTTGAATATAGAGGATATTATCTAAATCTGTTTGTTTTTTTTTTTTTTTTTTAAGTTTTAGATAGTGTGTAGCAGGAGTTCTAAAAACTGATCCAGATTTCTTGAACAGTGGGATACCTGTAGTGTGAAACCACTTTCAAGTATACTTCTGCCTAATGCCCTGAACTGGGACTAACTCACACGACAAGTGGGAAAAGGAGTTTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCAGCAGGCTCCCTCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATTAAAGTGAAACGTGAAAGTGAAGTCGCTCGGTCATGTCCGACTACTAGCGACCCCATGGACTGCAGCCTACCAAGCTCCTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCCGGAAAAGGAGTTTAGGACATAGAAAAACTTTTAGAGCTCCCTGAAACTACAGAAGCTTTAATTAATATGCAAACAGTTGGTGAAAAGTGGTTTAACTAAGACCCATTAGGCCTTTTAAAAAATTAATTTATGTGAGTATAATGTTTGTGAAAATTTCAAATATACAGAAATAAATGGAATAAAGAATTATGATTTCCCTTCATTTTACCCTCCCAGAGATTACCAGTGTTTAATAATATATATCCTTTCATGCTTTTTAATTAAGTGTGACTATGTAAAGGGTTTGCTTTGTACATAAATGGGATTATATTGAAATAAGTAGTGCCTATTTTTAAGGATAGGTTAAACTTGTGAATGATTATTTCAAATATATTGAATAAAATAAGACAAAAGCTATTTTTAATTACTTATTCTGTACTATGTCCTTAAAATATTTTTGATATAAGAACCGAGTTCTTTCTTCTTATTGCTGATATAGAATATGTATCAATTGTATTTTTCATGTAAATGAAAATTTTAAAAAGGAATTCGATGTTACTTAAAATTTTGTACAATAGAAAAGGACTTAAAATATTAACACAAAGAAAAGTGTTTTATAAAATCTGTTAACCAACTCAAATACCTCAGTGCAGATGTTAACTCTCTTAAAAAGAATGAGACTGCTCGATTATTATATCCTGATTAG EMBV3_19248 CGACGGAGAAGAAGGGGGCCATCCCAGAGCCATAAATAACCAGTACTCCTTTGTGTGAGA Gene GeneID:506066|SH2B1:XM_002698049:437_cdna Constitutive 0 NULL GeneID:506066 25 GENE SH2B1 NULL SH2B adaptor protein 1 EMBV3_25454 GGTCAGCATGGGCTTTGCCATTCTCAACATGATCCAAGTTCCATACCGGGCAGTCAACGG Gene GeneID:617290|CLRN2:XM_002688469:23_cdna Constitutive 0 NULL GeneID:617290 6 GENE CLRN2 NULL clarin 2 EMBV3_08993 GGAGTATTTCGTCAACCGGAGCTGGGAATGGAGCACCTACAACACTGAAATGCTGATGTC Gene GeneID:534380|FAR2:NM_001076022:5_cdna UTR3_Alt 2 NULL GeneID:534380 5 GENE FAR2 MGC139657 MLSTD1 fatty acyl CoA reductase 2 EMBV3_02254 TGGGTCCCACCTGAAGGCCAAAGTGGAGATGGCAGGACCCATCTTAATGACAAGTATGGG Gene GeneID:533732|SLC4A1AP:XM_002691454:289_cdna Constitutive 0 NULL GeneID:533732 11 GENE SLC4A1AP NULL solute carrier family 4 (anion exchanger), member 1, adaptor protein EMBV3_42072 TTTAAAAGAACTATGTATTTTATCTAGCAGAGAGAACAGAGAAATTATGTGGATTTATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17034 GGCAAATTTATCAGCAAGATGCTGCCATACAGAATACCAGACTTCAGTGTGGAGACCTGG Gene GeneID:525313|CCDC122:XM_002691776:370_cdna Constitutive 0 NULL GeneID:525313 12 GENE CCDC122 NULL coiled-coil domain containing 122 EMBV3_11284 AACCTGTACGGGCTGTCATTGGTGGTCTTTACTGTGATGCTGGACCTGGTGCTCATTGCA Gene GeneID:617878|LOC617878:XM_002693276:51_cdna Constitutive 0 NULL GeneID:617878 15 GENE LOC617878 NULL similar to olfactory receptor, family 51, subfamily M, member 1 (predicted) EMBV3_21589 AGGCCTTGAGAGAAATGCATGGTTTCAGAGACTGTGGGGTAGCCTTTTGCCCTGGAACAG Gene GeneID:616966|MED9:NM_001080916:111_cdna Constitutive 0 NULL GeneID:616966 19 GENE MED9 NULL mediator complex subunit 9 EMBV3_29588 CTGTCAGATTACAATATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGTCTGCGAGGC Gene GeneID:615199|UBA52:NM_001076363:62_cdna Constitutive 1 NULL GeneID:615199 7 GENE UBA52 MGC127041 RPS27A UBB UBC ubiquitin A-52 residue ribosomal protein fusion product 1 EMBV3_42183 GTTCACATATATTGACAGTATTTACAGAGATCTTGATTATTGTGGAATTTTCTTAAGAGG Gene GeneID:540024|LOC540024:NM_001081539:54_cdna Constitutive 2 NULL GeneID:540024 11 GENE LOC540024 MGC142879 ashwin EMBV3_10556 GGAAGTTAGAGCTTAGCCACTACCAGCGACAGGAGGAGGTTGCGAGAATGTCACAGCTTT Gene GeneID:615687|TMX3:NM_001102289:124_cdna UTR3_Alt 2 NULL GeneID:615687 24 GENE TMX3 MGC152463 TXNDC10 thioredoxin-related transmembrane protein 3 EMBV3_38602 ACCGATTGGTGCAACAGCTTCAGAATATCCCTGGAACACCAAAACTGGTCGGGGGCAGTT Gene GeneID:536048|MAK:XM_002697592:50_cdna Constitutive 0 NULL GeneID:536048 23 GENE MAK MGC134523 male germ cell-associated kinase EMBV3_20610 CTCTGATGAGGAAGAAAGTGCTTCAGAGTCTGAACTTTGGAAGGGCCCACTACCAGAGAC Gene GeneID:615724|C26H10ORF4:NM_001076392:231_cdna Constitutive 2 NULL GeneID:615724 26 GENE C26H10ORF4 MGC139562 chromosome 10 open reading frame 4 ortholog EMBV3_03892 GTGTTTCGCCCACAAGAATGGCTTCCTTCAGTCTTTCCTGAAGTTGGTGAGGTTTGGACG Gene BVT0102_099471 + 0 NULL GK000019.2:15086492-15098770 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095331 TCONS_00095332 1 XLOC_057689 NonCoding TCONS_00095332 XLOC_057689 NonCoding NonCoding LOC100847840 19:15087320-15090533 = TSS71107 790 1 TCONS_00095332_1 41 4 0.755292652552927 0.000413291205512744 0.000203477450702034 6.54402789268354e-05 0.000147133105612366 0.000187470781578305 4.51654768518398e-06 0.000369074478452773 2.05095992209927e-05 0.000577033585187427 0.00876450202545506 0.00223274257614956 0.00234590950702356 0.00272091526399268 0.00579864467835935 0.00152954829901749 0.0399513394045064 0.012793952687443 0.0305852457846111 0.0036538897876714 0.0023577288126602 0.000865052926566211 0.0124326078392316 0.0168786600430112 0.0193229163739581 0.000403044561016114 0.00161418740010997 0.000393061420246491 0.00837573281245831 0.00783078626317723 0.0190315624149013 XR_138969.2 LOC100847840 PREDICTED: Bos taurus uncharacterized LOC100847840 (LOC100847840), 0.0 1397 100.00 0.978481012658228 0 noncoding 1 0 1 1 -0.333986390216668 0.0385426584072422 0.00518996624570187 0.94269204747543 AAAAGCCTTTTCGGCAACTGGCTTCCTATTGTACAGCACAGGGTGGGCTGCCGTGAGCCTCAGCAGACCCGGGCAGGCCTCGTGAGAATGTAGGACGTAAGCGTTTTGGGAGGTTCGGAAAGCGGACTGCAGAGCCCTTGCCTCCAGCTCTGGTTTGCGCCCTGGCTCCGGCCTTACTTGTGTTTCGCCCACAAGAATGGCTTCCTTCAGTCTTTCCTGAAGTTGGTGAGGTTTGGACGTATTAGTAGTGTTAGTAATATTGTTATTTTTCTTATTATCATCATCATTTGAGAGTCCACTGCGTATAAGCATTGGTGGTCCTGCGCAGGGCGCCATGCAGAAAGCCTTGAGTTAGAAGCTGGAGGAAGGAGGGCTTATAGATGCTTGCGGAACGTCCTTAAACCAGCATGAAATGTTGGAGGTTCCCTGCTGAGTGTAATGGTTGCAAAGGCCAGTGAGACCCAGTCCTGGTTCTTCAGGAGCTCTGTCTGTGTGATGGGACTGGTTGAGGTGAAAAATACTGCTTTGATATCTTCATGGAAGACTGCATTATTTCATCCCTGAATCTGGTTCAGTTCCCTTATTGACTGATTACTGTGTTAAAATGCTTGTTTAGCAGTGATTGTAAAATAACAGTAATTAACATGTACATGCTCTCTTGGGGCAGACTAAGGGAAAACAGGTGTTCAGCCTGGAAAAGTGTTGCTCATTGGATTTCCCATTAAGTCAGTATGTCTTGGGTTTAACTTTTAAACAAGTTAAAAAATTAAATATTTTAAAATCTATAGGC EMBV3_39170 GATGCAGATCAGGATGATGTCAACAACTGATGGATCTCATGACTCAAGACAGCGTTTTGG Gene BVV0102_058377 - 1 EMBV3_29641 GK000007.2:32388794-32714460 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232144 1 XLOC_141630 NonCoding TCONS_00232144 XLOC_141630 NonCoding NonCoding - 8:62722637-62723911 - TSS173648 1274 1 TCONS_00232144_2 64 1 0 0.00224447580279088 0.0022800989253563 0.00215732700575399 0.00332969980260667 0.00348780210658935 0.00231755279294322 0.00385538485289614 0.00445344396598801 0.00616842758467915 0.000755723355578362 0.000519290928330315 0.000294699381506476 0.000904625453206415 0.00163353536312434 0.0018251294006245 0.0201048259168316 0.0132879051520809 0.0213463076080104 0.000758932943525582 0.000813787121492175 0.000707304315045107 0.00880209658234535 0.0157845573486217 0.012629415277441 0.000657136280943406 0.000875614834211103 0.000733160533100365 0.00233721242747769 0.0016013707770748 0.00425120599743288 XM_005210186.1 LOC101904753 PREDICTED: Bos taurus chromobox protein homolog 1-like (LOC101904753), mRNA. 0.0 2277 100.00 0.989795918367347 NM_006807.4 CBX1 Homo sapiens chromobox homolog 1 (CBX1), transcript variant 1, 0.0 1261 81.53 0.99607535321821 0 noncoding GAAAGAAGGAGTTCTCCTTGTCTTGACACCATAAAGGTGGCTTGAGAAGATGTCCTTTGAAGAGCCAGTATAGTTTCTGTGCCCTACAGCAGCCCAAGGGCTTCAAAGCCGTTCCATGCTGTACAGTTTGCACACCCATCCCGGTGGAGGGGAAGGAGGGTCAGTGTTTCAAGGCAACCCGTTCTGAACTTTGCTTTAAAAAAAAGCAAAGGGCCTTCTATGAAGGACAAAACGCAGAATGGGATGTGGGAGAGCAAGAGGTACTGTAGATCTTCAAAGAGCATCTCCACAACCCACACAGCCTTCTTCCCGATAGTGTTAACTCTGCATTTTTACAGCGTAGCATGTGTGTAGTTTTTGGCTATTACTGGTGTATTATTTGGGGTGGGTGGGGTGGGGTGGGAAAGAAGGGAGATGGGTTAGGATCATTTTTGTTAAAATTTGGGGAAACGGTGAAACAAAGGAAAGAACAACTAATGATGATTGGGTTCTGTGTCCGGAATATTGTATCCTTTCAAAAAATGCCATTGGCAACCTAAATGAGGACTGTGAGAGACTGTTTAAAAGCTGTGAATGCCTGAAACTTAGAAGCCAAGGTATTCCCTGCCTGAGCTTAATGCTGTTCCCAACAAAGGAATAAGAAGCTACCAAAGCTGCCATTTGGGGGATGGAAACTGGTTGAGGAGGATAAGTCTTATTGGAGTGTATACACAGGCAGATCATTCTGTCTTAGAGGTGCTACTCATGAAACTGACAAGAAGACCCTTTCTTTTCCTATTGTGAAGTTACAAATATCAGCTTCTCCATCCAAGCCACTGGTGAAGTATTTAGGGAAGGGCAGAGAGTGGTATAGGAGGTAAGTGAGTAGGGAAAGACAAGGGCCGGTGCTCATAGGGTGGAAAACTCTTGGAGCCTCTGTTTTTGAACTTTGAAACCATTGGTGGCAGGGTTCAGTCACTGACAGCACAAGTTCAAGAGTTGAATGATTTCAAAAGCCCTGGTCTCAGGAGAAGATAAATATTCATACTGGGGTAGTGGTTCACTTTAAAACAAAACAAATTTTTTAATCCTAAGAACTAACTAAAATCCAAAACGCTGTCTTGAGTCATGAGATCCATCAGTTGTTGACATCATCTTGATCTGCATCTAGAACTCCATTGTAATTTTTAGGCGTGTGTTAGGTTTTTGTGAAAAGTTGTTTAAATGTAAACTTCATATCAACACTGTCAGTTTTTTGTCTTAATAAAACTATATAGATTTATTAAAAAAAAAAA TCONS_00227906 . 5' 120815 TCONS_00227906 . 5' 120815 EMBV3_08287 AGGATATGGCCAGGGGTCACTAATAGCCGATGAGGAGTCCCAGGAGTTTGATGACTTGAT Gene GeneID:507513|LOC507513:XM_002689389:2_cdna Constitutive 0 NULL GeneID:507513 7 GENE LOC507513 NULL similar to G protein-coupled receptor 98 EMBV3_24427 CAGCCCACAGTGCCCCACGGGCTTTTCTGTTTGAACCCATGTGGAACAGATCTCAGAAAT Gene BVT0102_130484 + 0 NULL GK000028.2:28256946-28304693 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159423 1 XLOC_097413 NonCoding TCONS_00159423 XLOC_097413 NonCoding NonCoding - 28:28258372-28261823 - TSS119468 2472 4 TCONS_00159423_2 90 2 0.284057971014493 0 0 0 0 0 0 0 9.57074603240136e-06 0 0 0 0 0 0 0 0.0010256954741037 6.71613379696287e-06 0.000700353114292841 2.900861500189e-06 8.72747119771463e-05 2.08767548801783e-05 0.00056735592275661 0.000259782969922238 0.000189890741956826 0 0.000324913022594177 2.60722928788023e-05 0 3.92767604064976e-06 0 XM_005226343.1 CHST3 PREDICTED: Bos taurus carbohydrate (chondroitin 6) sulfotransferase 3 (CHST3), transcript variant X1, mRNA. 0.0 2459 100.00 0.550970873786408 NM_004273.4 CHST3 Homo sapiens carbohydrate (chondroitin 6) sulfotransferase 3 (CHST3), mRNA. 9e-95 352 71.56 0.284789644012945 0 noncoding 0 0 0 0 0.0753517740552843 0.631391443847235 0.0494433091581579 0.47848848216973 GTGTTGCTCAACATGGGATGATCTGAGTGTTTTAAGTTATTTATGGTTTGGTCTCTTGTGGCTATATTTTCAGGTTTGTTTCTGCAGGAGTGCTGCTTGGAAGCATTGTGGCCTTGAGCGGGGCTGGGAGGATCAGTGCAGAGCATTTCAGATCCTGCTGGAGCCAGAGGATTAGGAGAAGGAAACTTCCTCCAGAAGGATCAGAGCCTGGATGGCCACATGGCAGCCCACAGTGCCCCACGGGCTTTTCTGTTTGAACCCATGTGGAACAGATCTCAGAAATCACCAGTGTTCTTTGCTGAGTGTCCGAGGCAGCATAAATTAGCAGTTCTCACCCCTCCTCAAGAAAAGGCCAGATTTGAAAATCTCTCCCAAGCCCTAACATATTTCCTGGGGGATCAGGAGCCTATGATCAAGCACCAAATGTCCCCAAAGCGGAAGCCTTTCCCCACTCTCACCCAAAACCAGGGAGTAGAACTCAGTACCCCCTGAGAACTTGCAGGAAGAAACAGAAGTTCACTAAGGGCTGTTTCTGATTTCCTGGACAACCTCTGTATCAGATCCATCCCATTATCAAGCCTGGAGGGCTGAGTTTTGTTTCGAGTATTATGGACAGCAGGGAAATACAAGATCTGAGTCCAGCTGGGGTTGCTCTAGGGAAGAGAGGGGTGCATCCTGGTGGAAAGCCAGCCTTTGAAAAGGTGAGGACAGTGGCCATCTTGTGGGATCCATTACAATCAGTGCCCTGGGTCTCCATCACCGTGGATTCAACCGATCAAGGAAATCTCTAGGTTTTATAGTCCCAAGCATAAACTGTGCAGGGAACTGGCTCTAATTTGGGTCCAAAGATACTCTAGCTCTGAAAACTTGATCCTAGGGCAGAGTGGTGCCAGGATGGTTCTGGCAGGCCCAGAGTGCTGGCCATTCTTCCCCAGCCCCTGCCCTGCTCCCTCCACTGTCCCTTACTTGGGGTGGTGGGGGTCAGACACCTCTATCCAGCACCCTTCCTGGGTCCTGGGGCTCTCCTAGTGTGGATAGCAGACTTCCTTCCTTCTTTCCTTCCTATGCCTTTGGGGCTAAGGCCTCTACCCCTGAGTCCTGAGGACTGTGTGGAGAATGGACCTTTGGGACTTCTCAGGACATTGACAATTTGTACACTGCAGGTTGACTTAATTTATTTATTTTGTGACAAAGAAGAGATGGAAAAATATTTTATTATTTGCAGGGACTCAAAGCTGTACCCAAATCAAGAAAGACAACAGTAATAGAAGCCATTCACTTCATGTATACAAGGACACTCCAAGACAATTCAAAGTACACCAGAGGACAAAGCTGAGAGCATGGGAGTCATGACAGCTGCCGGATGAGCTCCAGGGAATCCGTGTCCCAGAAGAGGTATGCTTGGCCAAGCAGCAGACACGAGGTGTAAGCATCCAATACTCTAGTCCTAACCCTGAAGGTCTCTTCCAGCCCTGGGCCTGTGTTAATTGACTGTGGGGCCTGTCCCTTAAGAGGCCCTGGATTATGAAGGATGGAAGCAGAAGACTGGATGGCTGTGTCCCTGAGGCAGGGAGGGGATGGGGGGAACAGATGCCTGCAGAGGATACTCCTTTAAATTTGTGCAGACTGATGAGATCCAAGAAGAAGCGGGTCTTGTCAGTCTGCTCACATTTAAAGAAGAGGCATCCTCTGAAATCCAAAGTTGATGGGTTTGCCTGAAAGAGTCCTAGGACACAGTCCAGTTAGAAAGGGAGGGAGGAGGCCCAGGGTTTCCTGAATGCAGCCACGTGGTCTTTCAACTACCATGGTTTCAGGAAGAGTGGAAGCTGCTCTTTACCTCAAAAGGATGAAGCAGAATTAGCAACTACAGATGCCTTAAGAACTTCAAGATCCTAGGATCTTGTGACCTTTGTCATTCCATACTGTGCATGGGGGACTAACTAGTTATGCGTTTCCAAGATTACGTGGTGCCGTCTTCAGGGCCTAGCCCATATTGTGGACCAGGTATTTTATTTGTATTTATTTGTCAAATAAAATGACCTATGTATCTTGCTTCTTCTAACGTTGGGCTTGAACGGGGCACCCCCTAAAGTCTCCATTTCATCTATACTTTCTAGGCCAAATCTGCCTGATTCACCTGCTCACTCCTGGATCCTGCAAACTCTTTTTGCCAAGACCTTGGCCTTATGTCATATTTCACGGCCACGTAGTACAGGATACCCCTTTCCTGGCCATAGGTGGCCTGGTATGTACATATGTGTCCACACATCTGTATATGTAGCATGTAGCTCAGCCTGCTTGGCCCTGTTGCTCCCAGCCCCCTTGCCATCAATGTTCTTGCCGTGGCTACAGTCTCCTGAAAATACAGGAGTTGCCTTCAGAAAGCTGGTGGCTACTGCCAGTCAGGATCTGCTTTGCAGAACAGAATGTGAATTATTTAATTAAAAATGAAAACATGCAACAAGCAGAATC TCONS_00159421 s 3' 639 TCONS_00159421 s 3' 639 EMBV3_10856 TGGCCCTGAAGTTCTCCCAGATCAACGGTCAAATTAATCATGGTGCCTGGAGCAAGACGG Gene GeneID:524585|TTF1:NM_001102083:124_cdna Constitutive 0 NULL GeneID:524585 11 GENE TTF1 MGC151578 transcription termination factor, RNA polymerase I EMBV3_18677 ATGTGGACATAATGGTGCTGCTTAATCGGTTTGCTTCCAGTGTGGCCTCCTACCTAGAGG Gene GeneID:282147|ATP6V1A:NM_174504:35_cdna UTR3_Alt 2 NULL GeneID:282147 1 GENE ATP6V1A ATP6A1 MGC126942 ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A EMBV3_17593 GAAGATCCCTGGGCTGTGACCTGTCTCAAAACCATGTGCTGGTTGGCAGGAAGAACCTCA Gene GeneID:513706|LOC513706:XM_002689511:122_cdna Constitutive 0 NULL GeneID:513706 8 GENE LOC513706 NULL similar to interferon-tau EMBV3_26864 GTGCAAACAAAAGGGGGAAAGGGAGCAATGGGAAAACAGGTGGAAATGGCCAACCAAGAG Gene GeneID:100299811|LOC100299811:XM_002699913:6_cdna Constitutive 0 NULL GeneID:100299811 X GENE LOC100299811 NULL hypothetical protein LOC100299811 EMBV3_31485 TGCGGCTCTCAAAGGTCGCTCCTGTGACTTCAGTTACTCCTCCCGCCAGGAAGTGATTTA Gene GeneID:535381|PLA2G6:XM_002687923:136_cdna Constitutive 0 NULL GeneID:535381 5 GENE PLA2G6 NULL phospholipase A2, group VI (cytosolic, calcium-independent) EMBV3_18106 ATGACTGCAGGGTGAGTTGGAGGAAGTGTAGCCCACCAATGAGATTGAGGAAGAACAGCC Gene GeneID:100298796|LOC100298796:XM_002691981:74_cdna Constitutive 0 NULL GeneID:100298796 12 GENE LOC100298796 NULL hypothetical protein LOC100298796 EMBV3_13260 GATATGTATTGTCACTTAAAATGGTTGCCTTTAAAAAAAAAAATGTAGAAATACTAATTA Gene GeneID:782284|LOC782284:XM_002696394:140_cdna Constitutive 0 NULL GeneID:782284 20 GENE LOC782284 NULL similar to LOC510233 protein EMBV3_04200 CACTCAGCCTTTAACCTTCACCACTGCCACTTTCGCTGCCACCAAGTTTGGCTCTACCAA Gene GeneID:768016|TOB1:NM_001077075:177_cdna Constitutive 0 NULL GeneID:768016 19 GENE TOB1 MGC134447 transducer of ERBB2, 1 EMBV3_35868 CTCTAACAGCCAGGGAGTTTGTAGTTGAGGATGCAGTTTGTGTCCAGAAGAGGGAGGGCA Gene GeneID:783374|N6AMT2:NM_001080349:88_cdna Constitutive 0 NULL GeneID:783374 12 GENE N6AMT2 MGC140476 N-6 adenine-specific DNA methyltransferase 2 (putative) EMBV3_28764 TGTGTACATCAGGGCCTACATAGGTTGATGGCAGCCTGATTGCAGTTTGGTTCAGTTCTG Gene BVV0102_038302 + 0 NULL GK000013.2:78098373-78194164 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044090 TCONS_00044088 TCONS_00249387 TCONS_00044087 TCONS_00044091 TCONS_00044086 TCONS_00044089 2 XLOC_026114 XLOC_152330 NonCoding TCONS_00044091 XLOC_026114 NonCoding NonCoding LOC100847759 13:78103010-78105548 j TSS32474 521 1 TCONS_00044091_1 37 5 0.796610169491525 3.27834061727308e-07 8.07363649222905e-05 3.16160405940305e-07 4.00618060809753e-43 0.00137528571583265 0.000393844651626619 0.000538878170516388 0.000814276201403936 0.00227824104361567 0.0409532680494303 0.0286544445677124 0.0241708882691489 0.00545932067515675 0.0161011489446093 0.00704540678028951 0.079642044893366 0.0587139849092118 0.0573462028048276 0.000226052312626285 0.000127117899462093 3.34965898421232e-10 0.0378535558175425 0.0293226115297556 0.0488396403689553 2.27444665196456e-07 1.11523201938959e-20 0.000617882883084441 0.0298553222659641 0.0253708991300825 0.0364400819465352 XR_226062.1 LOC100847759 PREDICTED: Bos taurus uncharacterized LOC100847759 (LOC100847759), 0.0 801 100.00 0.850287907869482 0 noncoding 1 1 1 1 0.0107416419020998 0.930755672114829 0.698272363959177 0.0005262080633171 CTCTCCTCTGACTGAATAAGCGTCGTTGGGGAGATGAATGAGAGCTGAAGAAACCTAGGATTCCTCGGCCGGTATTTGCGTGATCAGACGCTACAGAATGAATCTTGGCGGAGGGGTCCCTGCTGGGGCTCAAAGGGAACCACGTGTCGACAGGCACAACCTTCAGCTTCCTGACCTCTGGAGCTCACTGTTGGCAGCAAACAGGCATTGAATGGACCATGATGGATCCAGGATTGGGAGAGAATTTGACCAGAGCCCTGTGTACATCAGGGCCTACATAGGTTGATGGCAGCCTGATTGCAGTTTGGTTCAGTTCTGTAACAGGAGTTTCAACTGTGGAGTCAGAATGCAAGGCCTCTTGAGAAAAATGTACATTTACTTCTGAAGCATGAAGCATGAAGGTTTGGGTTGTTGTGTAACCTAAGTGTGTAGAGGTAAAAAGCTTGTGGCTGTTTTGGTTATTTTACTTTGTAGCCTTCCTGTCTAGAGAAATAAAATAAAATCCTTTAAATGAAAATGCT EMBV3_23904 CCTTGTGTGTGGTCTGCAAAAATAAACAGCAGGGCAGAAATGGGGTTGTTCTGTGTTTCA Gene GeneID:514273|AMIGO2:XM_002687319:126_cdna Constitutive 1 NULL GeneID:514273 5 GENE AMIGO2 NULL adhesion molecule with Ig-like domain 2 EMBV3_22772 GAAGGACCTTACTGTGGAAGCTTTGATCACTGCTTAAAATTACACAGATGATAGATGGAG Gene BVT0102_109503 + 0 NULL GK000022.2:59965988-60013806 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131871 1 XLOC_080576 NonCoding TCONS_00131871 XLOC_080576 NonCoding NonCoding - 22:60005761-60006156 - TSS98738 395 1 TCONS_00131871_1 49 0.630379746835443 1 0 3.4444877090873e-05 0.00137370982553496 0 0 0 0 0 0 0 0 0 0 0 0 7.45245388923988e-05 0.00020059462815962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0224640980629012 0.883593416275898 -0.044965408693686 0.403108173506828 CTAATCAAAATATTTTGGTTTTTAACCTTTACTTTTTTGTATAGGATATGTGTATATCCATCTGGATCTCAATCTCCATCTATCATCTGTGTAATTTTAAGCAGTGATCAAAGCTTCCACAGTAAGGTCCTTCTCTTCTCCCTACCCCCAGCCACCCAAACGTATATCCTTTCATAGGTGCAACCACTGTTAGCCGGTTCTTTCGTTTTCCATCTAGAGAAATTCTGTAAATATGTGAGCAAATCTGTATGGATCGTCTCGTCTTATCCCTGTTTGTAATCACACCACACTTAGGCTTCTGCAGTGTGCTACTAATTCTCCCTTGGGATCACTTGATATCCATACAGAGAGCGGCTTCTTTCTTTTTTCTGCTTCCTTCTTTCCTCCCTCCCTCC TCONS_00129361 . 3' 7651 TCONS_00129361 . 3' 8045 EMBV3_28857 GGGCATTTACCACTAACCAGACCAAACAACCTTGGTAAGGCTGAGATCTTATGAATACAC Gene BVT0102_049343 - 1 EMBV3_25370 GK000016.2:78801871-79001593 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41478 TGAAGCCGGCAGCACCAAGAGGACCAATACGGGCGAAGACGGCCAATATTTTCTAAAGGT Gene GeneID:533792|NOVA1:NM_001101150:115_cdna Constitutive 0 NULL GeneID:533792 21 GENE NOVA1 NULL neuro-oncological ventral antigen 1 EMBV3_02864 GCGCGCTGGGGCCTCTGTTTTATTGCACACTAAATCGCTCGCTATCTATGCAAACACGAT Gene GeneID:521706|LOC521706:XM_002691466:326_cdna Constitutive 2 NULL GeneID:521706 11 GENE LOC521706 NULL similar to Intersectin-2 (SH3 domain-containing protein 1B) (SH3P18) (SH3P18-like WASP-associated protein) EMBV3_01015 ACTTCCACGACGTTCAGGATTATGCAGACAATATCAAAGCTCAGCTCTTTGAAACATCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35245 GTGAAGTTTCTTACTGAAGATGAGTACAGGGAACAAGCTGATGCCGCCACAACCTGCGCC Gene GeneID:506133|TMEM194B:XM_002685234:167_cdna UTR3_Alt 2 NULL GeneID:506133 2 GENE TMEM194B NULL transmembrane protein 194B EMBV3_15348 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17275 GAACAGTTCACTTTATTCCCTGGGTTTTCTATATAAACAGTTTTCAAGATATGATTTGGT Gene GeneID:506562|BZW1:XM_002685506:29_cdna Constitutive 2 NULL GeneID:506562 2 GENE BZW1 BZAP45 KIAA0005 basic leucine zipper and W2 domains 1 EMBV3_16119 GAGGAGGCAGAGGTCACAGCCTTCAAGGAGCAGCACATCTACCCCACGATCATTAGCACT Gene GeneID:515808|PUS1:XM_002694454:56_cdna Constitutive 1 NULL GeneID:515808 17 GENE PUS1 NULL pseudouridylate synthase 1 EMBV3_05017 CTAGCATACAAAGGACAGGGAAGAATGCCAAAAACTCTCAGCCTATCCCAGGTATGACTC Gene BVV0102_018140 - 1 EMBV3_38013 GK000008.2:25191192-25197699 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224748 TCONS_00224750 TCONS_00224747 1 XLOC_137626 Coding TCONS_00224747 XLOC_137626 Coding Coding HAUS6 8:25149917-25194514 j TSS168472 6640 1 TCONS_00224747_5 956 0.160843373493976 17 0.851488922773343 0.000180397332308326 5.93315522161357e-05 0.000185204261855967 0.000135532297818312 0.000173152061406683 0.000158367607551957 0.000101448778988546 0.000328514922839055 0.00043391235849236 4.68158762562119e-05 2.66476230518542e-10 3.52229164766564e-05 2.30791520086427e-05 0.000140115540376768 3.2586286478195e-05 0.00300647558729212 0.000854817762297518 0.00214608521219111 8.74141762358967e-05 5.40169867374027e-05 5.43913313033982e-05 0.00129519748372445 0.000954979643391436 0.00140695400158617 0.000386676619363577 1.63477305537221e-08 0.00020494263154251 0.000166378590742066 0.000189992749723323 8.00392943437583e-05 XM_002689566.3 HAUS6 PREDICTED: Bos taurus HAUS augmin-like complex, subunit 6 (HAUS6), 0.0 5791 100.00 0.483433734939759 NM_017645.4 HAUS6 Homo sapiens HAUS augmin-like complex, subunit 6 (HAUS6), 0.0 3772 80.21 0.609789156626506 TCONS_00224747_5 sp|Q7Z4H7|HAUS6_HUMAN HAUS6_HUMAN HAUS augmin-like complex subunit 6; 0.0 1415 75.05 0.998953974895398 1 noncoding 0 0 0 0 -0.16954295904718 0.25232442570853 -0.00714157751733104 0.924778070654278 TTGCGCGGAAAAGACCGAGGGGAGGGCGCATTGCATGGCGGGAGATATAATCCTCCCAGGAAGGCTGTCTTCCCTCGGCACCCGGGCGGCGTCTTCCGGAAGCGCGGGACGCTCGGTTTGTGGTGTCTTCGCTCTGGCCGCTGTGCGGTACTACAGTTAGAGGTTCTATTTGCCTGAAACTTTAGAATTTCAGGCTACTTGAGGCCATTTGAGGCGAAATGGCTCCGAACGAGAGAGGATTAAGTGGTGGCAGTTGAGGGGCCGCCGCCACTTTAGGCTGCCCGTAGGGAAGAAGTCTGAGGGGCCCTCTAGACCTTGGAGCCTGTGCTTTCTTCATTTGCCGGGCCCTGCCTACCGCGAAGATGAGCTCGGCCTGGGTCACTTCTTTCGAAAAGGCGCGTCTGTGGATGTACCTGCAGGCGCTCGGCTTCGAGCCTTGTCTGGCGACCATAGCCTGTGGAAATACCGTGTCACACACGCAGTTCGGAGTGAACATGTTTGACAAGCTGAACCGTGATGCCTTTCATATAGTTTCTTATTTTTTGTTTCAAACACTTGACAAGTCTCTCACCAAAGAAGTTTTCAAACATTGTTGGCCTCCATTTGATCAAAAACGTGATGTTGAATTCCGAAAACTTTTCTGTGAATGGTTAAAAAAGATTTCTGCCGAATGTGGAAGTAGCTTTCCTCAAGTTGTTGGTTCACTATTTCTATTTCCAGTTGGTCCTAAGTTTATTCATATAATGTATCACTTTGCAAGATTTGTTGCAGTAAAATATATAAAAACCCATTCTAAAAATTCTTCTATACGTTTTACAGAGACATTTAATGTTAAACCACAAGATTTGCACATATGCCTTGCCAGATGCCTTGTAGCACGTAATAGATTTTTACAAGTTTTGCAAAGAGAAGATTGTGTTACCCGAAAATATCAAGAAAATGCACAATTGTCAGTTAAACAGGTACGAAATTTGAGATCAGAATGTATGGGACTGGAAAACCAAATAAAAAAAATGGAACCCTGTGATGACCAAAGTAATATACAAGAGAAAATTCAAAAGGTTCGGTCTTTGTGGACTAACGTGAATGAAACACTTATGTTTTTGGAAAAAGAGAGAGAAGTTGTTAGTTCAGTCCTTAGTCTTGATAACAATTATACTTTAGATGGAACTGACATTGCTATCAATATTCCAAGCCTCTTACTTGATAAAATTGAGAAACAAATGTGTCAGTTGCACACAGGAAATATTTATGAGGCTGGAAAATTGAACATCTTAACAGTTTTTTGGTTATTAAATGAAGTCTTGAAAGTAATGAAATGTGAATGTTGTCAAACTGACCAAGCAAGACTGACAATAGACCTTCACTTCCTTGAAAAAGAGACCAGATTTCAGAAAGAAAGACTGTCAGATCTGAAGCATATGAGGTATAAAATAACAGAAGCTCTCAAAACTATAAGACATTCTATTGTTGAAAAGCAAGAAGAATGGCATAAAAAGTGGAAAGAGTTTCTTGGCTTGTCTCCTTTCAGTATAATTAAGGGTTCTACTCCAGCTGTGGATCTTTTACCGCCTATGTCTCCACTTTCGTTTGATCCTGCCTCAGAAGAAGCATATGCGAGGAGCATTCTTTTACAGTATCCTGCTTCACTTCCAGTTACACCTAAGCAACATATCCAGGAAAATAATTGCAGAAGAGCAAGTGATACACTGGAAACTAAATCTGATCCACCCAACAGCCCTGCTTCTTTCCCGTTACAGCCAGTTCCACCATTAGGTGGAGACATTGTTACATTACTTGAAAAGGACACGAAGTTGGTAACTCTTAGAGAGAAAAATGAAACAGTTCCTAAGAAAACACCAGAATTTAATGTAGAAAACTCTTCATCATCAAATATTGTAAAGAATACAGATAGTAGTGCGTGTGGAGGGTCTCTGCCAGCTAAAAAAAGCAATCCATTCCAGAAGGAGCAAGATCATCTGGTAGAAGAGGTCGCAAGGGCAGTTTTATCTAATTCACCACAGCTCTCTGAAGAAAAAGAAGTAAAATTAGAGGAACTAATTGACTCTCTAATTTCTAACCCATTCTTAACAAGGAGTCAAATTCCCCGAACTCCAGAAAACTTGATAAGTGAAATTCGGAGCTCATGGAGAAAAGCTGTTGATACAGAAGATAACAGAAGTACAGAACCAATTCAAGTGGATACTGAACGTAGAGAAGAATTGCCAGAATCCTTACCTGTGGTGCATAATCAAAAAGAGTTTAGCATGGCCAGTTTCTTGTCAGCAGCCACTGTGTCCAATTCTAGTCATTCTCATCTGCCTGAAGAGAAAGTTGTTTCAGATTGCCTCGAGTGTGTGCCTCAGAAACCCGTGGTGACCACTTGCATAGGTGAACCAACAACACAAAATCCATCAGATTTGTTAAATAAGGACATAATTTGTATGCAAGATTTGGACTGTACAACTTTACAGAACAAACTTTTAGAAACTAGCCAAATAGAGACATTTTCCCCTGCTGTAGGCAATAGAAGAAATGTGTTAGGTAGCAGTGAAGAAGATAATATTAAAATATCAGACCAATCAAAAGCTTCTTACAAAGACTTTTCCATGTATAACAGTATGTTATGGAACTGTTTTCAGGTATCAAGTGAAATTAGTTCCAGTTTTAAAGATGGTGATTTTGGCATATTACATGAAACTCTTCCAGAAGTTGGTCACATAAGTCTTATTAGCCCCAGTAGTACAGAGGCCACTTTTAACCTGGAACCAAATAGTCCTATGCACAGTGGCATTTTCACAGAAGATGTTGTGGGAGAAAAACAGACTACTCCAGAATCAGACTTCAATTTACAGGCTACTTGCAGTGGATATGAGGCTCTGAAGAAATCTCCATCCAAGCAAAGGGAAGAAATTTACCTCTCTAATCCTGAAATACTTGAAAGACACAAACCAGAATTGAGCCTTACTCCACAAAAGATGCAGACTGATGATATGCTTAATTTTTTGGGCATTCATGATTTGCATATTGACTATACAAAACCATCTTCACGCATGTCCCTTGGTGAAAGAAAACGGTCTCTTTCACCACTAATTAAGTTTTCTCCAGTGGAACAAAGATTGAAGACCACAATACCATGTAGCCTTGGAGAACTTCTATCTAATTTAACAGAAGAAGAAATCTTGAATAAGAGCCTTGATGCAGAAGTATCTCCATCTGACTCAACAAGATGAAGCAGTAGCCCAGTCAGTTTAACTGTGATGCACTTAATTTGAAGCAGTGACATAAAATAAAAACTAATTTGCAGTTTAAATACACATGGGAAGTGTAACTGTTTTTCAAAGTCTAAAAAAGTCTTAAATAATGCCTGTTAGCCTTTTCTACTGTTTTTAGGTAAGGAGAATATGTTTGGATTTTCTTGCTTTGTATGGATAGGGGGTTGAACTGTGAAGTATTGGAAAGCAACTGTGAAGCCATTTTGGTTTCTTTCTTGAGATTCTTTATCATTTGAGCTACCCAGGAAGCCAGAGTAATATTGTAAGCATGAAGTAAATGACAAGGTAGTAGGCTAATTTATTATGTCCTAATTCAGTTAATTAACATAAAGATGAGTAGTTTTTGATGTAATTTTATCAAGTGGTTTACTTAATAGCTATTAGATATATGATTTTTCTTTTTAGGGAAATAACTTCTATTAAGTGAGGAGAGTAATGTATTGTAAAAATGACAAAGTTTAAGTTTGGGAAAGCTCTAAAGAGGCTTAATGATTATTCAAGTAGGTTGGTCCTGAAAAATGATGTTTGATAGAATAAAGTGCCTGTGATGATAGTGAAGACTGGGGTAGAAAGAAAAAAGTGGAAGATGACTAGATATTTTTGAGGGACAATAACTATAAATCCATTCAGTGGATTGTATAGCAGTTTTATGTTTAGACTAATTTAGACTTTGAGAATTTAACTCTAGTGTTTTATTTGAACAGAAAAAAATAAATTAGTCTGTATTTTTTGTTGGAGGGGCACTACTTTTGGGGGAGCTAATTTGTATTGCTACTTTCCTCCTCAGAAACCATCAGTTCCCCAACTGCCTATAGAACAGCTTCAAATTAACTTGAAAAAACTGAATTTGGGGTTAAATAACTTGTTCAGTGTTACACAGCTAAGTCGGTGATGAAGCTAGGGTTTAACGCTATTTTCCTTCCTTAATAAACCAACAAGACCTCAGAACTAAAAGGCCAAGGTGTAGGATATGGCTGCAGGAGTGGGCTTTCTGGACTCTAAATGGGAGTCAGATGTGAGGTCTCTTGTATAGTGTCCTGCCTGATTTAGTCAGGCCTCCCAGCCAAGAGAAAGGCTTGTCTTTAGCATTCAGGTGAATACATGCCATTACCCTCTGTGAACCAGGAGGTTAAGTACATGCTGGAAGGGTTATAGCACCTACAGCACCCCTGTGTCTAATGCCAGCTCTTAACCATCGCAGCTTTGTCCATTTGCCAAGAAACTGGCCAGAAGAGGAGAAAAGTTGAAGGAGAGAGTTCTGGAAGTAGATGGGCTTAATAGTTCATCTTTCATGACTCATTTTGGCTTATTTTCTTTTGTGTTGCTTGTTTGATCCAAGTTTGAAGGCCAGGCATGTGTGTGTGGGTGTGTGTGAGAAAAGACATAAGAAAAACACATATAATTACTCTATTAGCAGTGGAAAAGAAAGTGGAAGAGAAAAGCTTCTCCTCAGGTGGCATATTCTTTTATTAGTTAATAGAACAAATAGGGATTCTGCAGGTCTACAAGGAAACTGTTCTTTAGTCTTAAGAAACCCAGTACTGGTAAGCTCAAAATTAATATGTTAAGGAGAAGGTGCAGCTCTCATACTAGCATCTACAAATTGCCAGGGCCATTCCTAGATACTTAATATGTGTGCATGTTAAGTTGCTTCAGTCATATCCAACTCCTGGTGACCCCATGGACTGTAGCCCACCAGGCTTCTCTGTCCATGGGATTCTCCAGGCAGGAATACTGGAGTGGATTGCCATTCCCTCCTCCAGGGGATCTTCCCCACCCAGGGATTGAACCCGAGTCTCTCACGTCTCCTGGATTGGCAAGTGGGTTCTTTACCACTAGCACCACTTGGGAAACCCATATACTTAATAATATGTATTAGATACTTAATAATACAAATTTTATCAATTAATTCTTAAACCTCTGTAAGATAGTGATATTGTACCTATTTTATAGATAATGATACCAAAGCTAGGGACCTTCTTTAAATGACTTGTCTAAGATGGACTCAAGAAATTACCTGGGATACATCTTAAAAAATGTGGATTCTGTAGGTCTAAAATGAGGATTAGAAATTTCTACTTTTAAATATGCTTCCCTGGTAATTGTTAGGCTTAATAAGAAACTTGAGAGTCAGTGCCAGGGGATATAATTTGCCTTTAGTCCTGGGGTTTCTTAAAGAAGCTAGGTACACTATTCACACCATACTGCTTTATAGATCTTAGCTGTTTGATAAGGAAACTGTTTGGCAGAAAGTGAAAAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAGCATTCAGAAAACTAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAAATGGGGAAACAATGGAAACAGTGACCGACTTTATTTTTTTGGGCTCCAGAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTGCTCCTTGGAAGAAAAGTTATGACCAACCTAGATAGCATATTAAAAAGCATACTACTTTGCCAACAAAGGTCTGTCTAGTCAAAGCTATGGTTTTTCCAGTGGTCATGGATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTGCCTTGGACTGCAAGGAGATCCAGCCAGTCCATCCTAAAAGATCAGTCCTGAATATTCATTGGAAGGACTTGATGCTAAGCTGAAACTCCAGTACTTTGGCCGCCTGATGTGAAGAGCTGACTCATTGGAACAGATCCTGATTCTGGGAAAGATTGAAGGTGGGAGGAGATGGGGATGACAGAGGATGAGGTGGTTGGATGGCATCACCGACTCAATGAACATGAGTTTGAGTAGGCTCCTAGAGCTGGTGATGGACAGGGAAGCCTGGCGTGCTGCATGCAGTCTTTGAGATTGCAAAGGCTCGGACACGACTGCGTGACTGAACTGAACTGAACTGAATGGAAGCTGAAGCTTACAATAAGTGTAGGCCCTCAATTGCTGAGAATCTGAAGATCAAAATATCTCTAGATATTAATGGATTTACAAAAACCACATTGTTAAATGAGTCATACCTGGGATAGGCTGAGAGTTTTTGGCATTCTTCCCTGTCCTTTGTATGCTAGTTGTATAAACAAAAGTATATTAAATCTGTCACTTTCTTGTAAACCATTTTGATTATGACTTATTGCTTTTAAGTCTCTTCCTTGTTTGTTATTGCCTGCATACATGCCTTTTGTCCTTAAGGGACTGCTTTGATCATACCATTTTGTTTAAAATGGAAAAACCACTGGAAAAACCATTAAAATGGTAATTCTAGAATT EMBV3_02690 AAAGGCCAAGGAAGCCCCCAGTCTCCGCCTAGCTATGGGCTCCACCCTTTCTTCTTTTGT Gene GeneID:532772|LTBP3:XM_002699343:216_cdna UTR3_Alt 2 NULL GeneID:532772 29 GENE LTBP3 LTBP2 latent transforming growth factor beta binding protein 3 EMBV3_33554 CCTCGCGGTTGTAGCTGTTCTCATAGAGGTGGGCTCCTCCAATCCAGCATATGACAAGAT Gene GeneID:614323|CA12:XM_002690877:296_cdna Constitutive 0 NULL GeneID:614323 10 GENE CA12 NULL carbonic anhydrase XII EMBV3_10015 ATGTCTTTTGGCAACTCTGTTTTGGGGAGACCTGGTGGGGCAAATCCTTGGACACCATGC Gene GeneID:616818|S100A8:NM_001113725:230_cdna Constitutive 0 NULL GeneID:616818 3 GENE S100A8 MGC137009 S100 calcium binding protein A8 EMBV3_40124 ATTGTTTGTGGGGTTCTCAAGGCAAGAATCCTGAAGTGGTTTGCCATTCCCTTCTCCAGC Gene BVV0102_069908 + 0 NULL GK000007.2:112356095-112510326 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063074 TCONS_00006861 TCONS_00254233 TCONS_00054796 TCONS_00038176 TCONS_00011665 TCONS_00057720 TCONS_00214945 8 XLOC_037801 XLOC_002423 XLOC_157167 XLOC_032605 XLOC_022002 XLOC_007216 XLOC_035517 XLOC_130795 Coding TCONS_00214945 XLOC_130795 Coding Coding - 7:112373424-112375036 - TSS160646 1612 3 TCONS_00214945_1 154 0.98697270471464 1 0 9.56670977808197e-13 0 0 0 4.33804994865177e-09 1.72716814421258e-09 0 0 2.44732077853671e-06 2.15816147890985e-12 1.77511367613585e-06 4.17753575451396e-05 1.77964542763781e-06 0 0 0.000546657991776107 0.00022143233567283 0.000747959932460919 1.38013852150404e-22 2.23059212187979e-06 0 2.1072925743999e-44 9.4015361603828e-05 0.000461831550541176 0 6.24376268851492e-07 0 2.25523707746395e-05 3.01214059535281e-05 8.76474838686411e-05 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 0.0 948 92.83 0.396401985111663 TCONS_00214945_4 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 3e-56 187 76.92 0.991452991452991 1 noncoding CGGCGCACTAAGCGCGACGGCGGCTGCGACCGGCGCACTAAGCGCGGCCGAGATGAGCCACCCCACGTCCGAGGTCAGGGGCAGAAGCCGGGAGGACCCCATGCCTGAAGGGCGGCGGCCAAGAGGACTTACCCCACGTCCGAGGTCAGGGGCAGCAGCCGAGAGTGCCAGGCTGCAACGGCGCAGGAAGGGCAGAGAAGAGCTACCTAAGTCCGAAGTCAGGGGCAGCCGGGAGGAGCTACCCCACTCCCCCACGCCGGAGGCCAGGAGCAGCGGCTGGGAGGACCAACCCCAGTCCAAGGAGTGGTGGCTGCGCGGGCGCAGGAGGGCCTGGAGGCGCTATCCCACGTTGAAGGTCAGGAAGGGTGGCGGTGAGAAGATACTCCTCGTCCAAGGTAAGGAGCAGTGGCTGCACTTTGCTGGAGCAGCCGTGAAGAAATACCCCATGTCCAAGGTAAGAGAAACCCAACTAAGATGGTACGTGTTGCAAGAGGGCATCAGAGGGCAAACACAATGAAACCATACTCACAGAAAACTAGTCAATCTAACCACACTAGGACCACAGCCTTGTCTAACTTAATGAAACTAAGCCATGCCCGTGGGGCAACCCAAGACGGGCGGGTCATGATGGAGAGATTTGACAGAATGTGGTCCACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCCATAAACAGTATGAAAAGGCAAAATGATAGGATACTGAAAGAGGAACTCCCCAGGTCAGTAGGTGCCCAATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAATGAAGGGATGGAGCCAAAGCAAAAACAATACCCAGCTGTGGATGTGACTGGTGATAGAAGCAAGGTCCCATGCTGTAAAGAGCAATATTGCATATGAACCTGGAATGTTAGGTCCATGAATCAAGGCGAATTGGAAGTGGTCAAACAAGAGATGGCAAGAGTGAATGTCGACATTCTAGGAATCAGCGAATTCAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTATGGGCAGGAATCCTTCAGAAGAAATGGAGTAGCCATAATGGTCAACAAGAGTCTGAAATGCAGTACTTGCATGCAATCTCAAAAACGACAGAATGATCTCTGTTTGTTTCCAAGGCAAACCATTCAATATCACAGTAATCCAAGTCTATGCCCCAACCAGTAATGCTGAGGAAGCTGAAGTTGAATGGTTCCATGAAGACCTACAAGACCTTCTAGAACTAACACCCAAAAAAGATGTCCTTTTCATTATAGGGGACTGGAATACAAAAGGAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAATATGGAATGAAGCAGAGCAAAGACTAATAGAGTTTTGTCAAGAAAATGCACTGGTCATAACAAACACCCTCTTTCAACAACACAAGAGAAGACTCTACACATGGACATCACCAGATGGTCAACACTGAAATCAGATTGATTATGTTCTTTGCAGCCAAAGATGCAGAAGCTCTATACAGTCAACAAAAACAAGACTGGGAGCTGCCTGTGGCTCAGATCATGAGCTTCTTATT TCONS_00214936 TCONS_00214938 TCONS_00214939 TCONS_00214940 TCONS_00214942 TCONS_00214943 s 3' 14660 TCONS_00214936 TCONS_00214938 TCONS_00214939 TCONS_00214940 TCONS_00214942 TCONS_00214943 s 3' 14660 EMBV3_34622 GAAAGCCTACCAAGGATGAATGCCACAAAAATGCCTGAGCCCAAGTGAGAGAGGTGCGTG Gene BVT0102_358610 + 0 NULL GK000001.2:108377450-108383676 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24359 GTCTCAATTGGGCGCATCTATTCCCTCCACTCTGTTCTCCCAAGTAAAGATCCTGCCTTC Gene BVV0102_065033 - 0 NULL GK000014.2:38775001-38983785 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053339 TCONS_00053340 TCONS_00053341 1 XLOC_031696 Coding TCONS_00053340 XLOC_031696 Coding Coding STAU2 14:38924292-39192396 j TSS39366 4139 1 TCONS_00053340_2 466 11 0.984602932455064 0.00218229586405162 0.0021743316426217 0.000633202651238393 0.000828716586191158 0.00181856450568763 0.000363438358983204 0.000981912098934289 0.00111647696266313 0.000921130788489725 0.000638390550339474 0.000532990632405362 2.65373695538473e-10 0.000236130376034019 0.00225688665618854 0.0010984349461748 0.00040195722914724 8.573258203761e-15 1.39998585284228e-16 0.0012214902482384 0.00191382865867025 0.000374870927242285 6.86061513749525e-16 0.000186598220125918 5.82048410595326e-39 0.00328385258442066 0.0035783269915278 0.000654712466148301 2.91590872974711e-05 0.00017761971562645 0.000265996217586044 NM_001103313.1 STAU2 Bos taurus staufen, RNA binding protein, homolog 2 (Drosophila) (STAU2), mRNA. 0.0 2021 99.73 0.272771200773134 NM_014393.2 STAU2 Homo sapiens staufen double-stranded RNA binding protein 2 (STAU2), 0.0 3660 83.29 0.85672867842474 TCONS_00053340_2 sp|Q9NUL3|STAU2_HUMAN STAU2_HUMAN Double-stranded RNA-binding protein Staufen homolog 2; 0.0 879 89.04 0.997854077253219 2 coding 1 0 0 0 0.0123355748664789 0.946750731161003 0.0411852126075567 0.467298155189362 TCTGGAAAGGTGCAGGATCCGCTAAACCGTGCATCGCACAGCGGCGGCCGGAGCAGACGCGGGATGGTAGCCCGTCCCCAGCAGAGCAAAGGGGGGCAGCGAGAAAGCCTGGGGAAGTTTTTGGAGCCGTGAGGGATACAGCACTTTGGTCAATATTGTTTTAACATGCTTCAGATAAATCAGCTTCTCTCCAAGATAAAATGGCAAACCCCAAAGAGAAAACTCCAATGTGTCTGGTAAATGAGTTAGCCCGTTTCAATAGAGTCCAACCCCAGTATAAACTTCTGAAAGAAAGAGGGCCTGCTCATTCGAAGATGTTCTCAGTGCAACTGAGTCTTGGGGAGCAGACATGGGAATCCGAAGGGAGCAGTATAAAGAAGGCCCAGCAAGCCGTCGCTAACAAAGCTTTGACGGAATCCACGCTCCCCAAACCAGTTCAGAAGCCACCCAAGAGCAATGTTAATAATAACCCAGGTTATCATTGCCCAGTGCCCAAGATCTTTTATGTTCAGCTGACTGTGGGAAATAATGAATTTTTTGGGGAAGGGAAGACTCGACAAGCCGCTAGACACAATGCCGCGATGAAAGCCCTTCAGGCACTGCAGAATGAACCTATTCCAGAAAAATCAGCTCAGAATTGCGAATCAGGAAAAGAAATGGATGATGATAAAGATGCAAATAAGTCTGAGATCAGCTTAGTGTTTGAAATTGCTCTGAAGAGAAATATGCCCGTCAGTTTTGAGGTTATTAAAGAAAGTGGACCACCACACATGAAAAGCTTTGTGACTCGGGTGTCAGTGGGAGAGTTCTCCGCTGAAGGAGAGGGAAATAGCAAAAAACTCTCCAAGAAGCGCGCTGCAACCACTGTGCTACAGGAGCTTAAGAAACTTCCACCTCTGCCTGTGGTTGAAAAGCCAAAACTATTTTTTAAAAAACGCCCTAAAACAATAGTAAAGGCTGGACCAGAATATGGTCAAGGAATGAACCCCATTAGCCGCCTGGCTCAGATTCAACAGGCCAAAAAGGAAAAGGAGCCAGATTACGTTTTGCTTTCAGAAAGAGGAATGCCGCGACGTCGGGAATTTGTGATGCAAGTCAAGGTAGGGAATGAAGTTGCTACTGGAACAGGACCTAATAAAAAGATAGCCAAAAAAAATGCTGCGGAAGCTATGCTGTTACAACTTGGTTATAAAGCATCCACTAGTCTTCAAGATCAGCTTGACAAGACAGGGGAAAACAAAGGATGGAGTGGTCCAAAGGCTGGGTTTCCTGAACCAACAAATAACACTCCAAAAGGAATTCTTCATTTGTCTCCTGATGTTTATCAAGAGATGGAAGCCAGCCGCCACAAAGTGATCTCTGGCACGACTCTAGGCTATTTGTCACCCAAAGATATGAACCAACCCTCGAGCTCTTTCTTCAGTATATCTCCCACATCGAGTAGTTCAGCTACAATTGCCAGGGAACTCCTTATGAACGGAACATCTTCTACAGCTGAAGCCATAGGTTTAAAAGGAAGTTCTCCTACTCCCCCTTGTTCTCCAGTACAACCTTCAAAACAGCTGGAATATTTAGCAAGGATTCAAGGCTTTCAGGTATGAATTAAAAGCAAAACCAAGAAAACAAAGCACTTCATTAGCCCCTAGTCCTCCATCTCTCTCCATCAGAAAGCTCATTCTTGCCTGCTAGCGTGACTTCTGTGCCACTTACATTGTAAATCATTAGGAACACGGAGGACAGAAAAACGAGCCATGTGCACATGCCTCATTTTAAAGATTTTTCATTCTCTCCAGTAATTATTTTTTGCTGCCTGGCTCTCCTCCATATTCTTTCTTCCTCCTCTATTTTTTTTTAAGACATTTTTCATCCTCTGTTCTGTCTTCTGATTGGTCTCAATTGGGCGCATCTATTCCCTCCACTCTGTTCTCCCAAGTAAAGATCCTGCCTTCATACATTTGGTCTTAGTATTTAACACTAAGTGCTCCCTCAGTTTACAGTAAGGTTGAGTTTTTCTAATGCTGATTTTACTGTCATAGCAATTTTCAACTTGGCATTCTGTTGCTAGTAATGATCCCGAGATGCCACTAAGGTACAAAATCCTAGAAGCCTGTTGTCTTAGGAGTTCATTAACCATGGTGTTAGAACAGTAATAAATGCTTTCTAGCTCTTTGAGGCATAAAAACATGTATTGTTTTACTGGATTGTGTTTGGAACCATCTAGGGTAGCACCTACCTCAGATGGTACCAATAATTCTATTTCACTGGGCAGTCTACACCTAGCTTATAGGCCTCTTGTTGTGTATAAGAATTTGGGGCTGGAAACTCTCCCCCTCCCCCATTTAGTCATTGTTCCCTTTTGGAAAAAAACAAACCACAATAATCCTCTGTGGGTAGATCTTTTAAAAGAATTGTTAACTCTAGGAAGAGGAAATACTTGTGTTTTGACATCTTAGTTGCCTTGAAAATCCTGTACTGAACTGTAACCACTTGACTGGATGAACAGCAGCATGCCTGTGTGTAGAAAGAACAGACTGTCCCCGCAGAGTTGACAATTTTCACACCCCTTTCCATCTTAGTCTTACTCCCTAAGACCAAAAACTGTAATTTCCTTTAGAAATGCTCTAGAAGGTCTGTATTGTCTAAAATGATCATGTATTTATACATTTTTTTCAAATTTAGATATGAGAGAAGATCATGTGGTTGAGGGGGTGGAATTTTTGCATGTTTTTTTTTGTTTGTTTATTTCCCTTCACAGAAACCTGATTCTTTCCAATCTCTTGCCAGGTAGTGGTTAGTGTTTTTAATTAGATTATTAATATGAAATCTAAAAAGCTGTTACCAGTTTTTGGCTCTGTCATCTGAAATTTTAATCATTTAATTTAAAAATTAAAATTTTAGGGTTTGTTTTGTGGTTTACCTTAAGAATAATAACTCACTGTTTAAAAGGACCTTCATTCACACAGTTAAAGTCCTGCAGAAAAAGAACTAAGCAGTTAGTTCTATCTATAATGTGCATGGATGAACTAGAAATAAACTGTGATGGAAAGGAATTCACTGTTTATTTACAAATCTAGTTGTCTAAAAATGTCCGAAAGTAATACTACATTTGGATTTTTATAGAAACAAAGCACAAATTGATTCAAGCTCTGAATTGAGTTTTTTGCTTGGAGAAGTTACTGTGGTAGATGTTCATTTAGCTGCCAGAAGAACTACTTAAATTTTTAAATTTGTATTTATTTGTTAATTCTTGGCAGTGACAGCAACTGTAATTTTAAAATAGTTTTGCTTTAGTCAAAATGTAGAATCTGTTACTCCTATATTTGGGCTGACTACTCAGACCCTTTTTTTTTTCTTTTAAAGTTTATGCTGAGATATTACACTCTTATTTATGGGCAAGTTAGTAAACATTTCCAAATTGTGTTTGGTGATTTTTACATACTAATGAATATAAGCAGATGGTTTGAAACATTACTGTGCTTCTTTGGTCAAACGAGCTTGATGTTGATAAGAAATACTGTGTTGCTGACAAGCTGCAACCTGCAGCTGTGCAGTGAACAGACTGTGGGAAATGGCTCCATGCCCTGACAGGTGCCCAGCACATCCTCATAATGTCACAGTAGAAGAGTCTTTGTGGTTAAGAGTTTTAAAGCCTATTTCTTTATAGGTAACTTTCTCAGGTGTATTTACCTGCTAGAAAAACATGTAGGATTGTTTCTATTTCTTAAATGTTTTAATTGGACCATAGTTTAGAAATGATAGGGCCAGCTTGTTACGGATTCCATACTATTGTGTTATTTTTATTTCTGGAACTTAAAAACAATAAATTCTTTCTCTGTGTCTCAAGGTTAGTACTTTTAAAATTTTGTTATTGTACACTGAATAGATATTATTGCTTATTGAATATTGTATAAACTCTTCTCTGGCCTTCTGTGCCCATTGACATTTGATTTAAGCCTACCAGAGCCATTGTATGTGACAGCTATATTGTATTAAAAGTAAAAAATATATTAGTGTACTGAAAACTATGTTGTTTTAACTTTAAATTTTTTTTCATTACCCACTCTTTAACTGAAATTTGAGTGACAAAAAGCTTATTTGCTCACCAGAATGCAAGTATTAAGCACATCCTTTCCCTTAAG EMBV3_07808 GTTCCCAGGACAACCCCACGTTTTCATGCAACAGGCACACCTCAAGGAAGAGGAAGCGCT Gene GeneID:518609|CD55:NM_001030303:64_cdna UTR3_Alt 3 NULL GeneID:518609 16 GENE CD55 DAF CD55 molecule, decay accelerating factor for complement (Cromer blood group) EMBV3_01449 CATGTCATCAGAATGAGAGGGACATCTTCATGGACAGCATTGTCACAGGTCTGCGGCTCC Gene GeneID:539556|PDE4D:XM_002696315:38_cdna Constitutive 0 NULL GeneID:539556 20 GENE PDE4D NULL phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) EMBV3_22005 GGGGAACAGCCCCTCCCTGCCTCCAGCCGAATCCATTTGGAAATACTAAGCTATTACTTT Gene GeneID:507340|ATG13:NM_001076812:51_cdna Constitutive 0 NULL GeneID:507340 15 GENE ATG13 NULL autophagy-related protein 13 EMBV3_19971 AAGGGAACCTTGTTCTGGGCGGGCGGAGAGCTTGAGTCCGCTAGGAATGGCAGCCCCAAC Variant GeneID:768072|LOC768072:XM_002698793:164_cdna 191^370 1 EMBV3_42730 GeneID:768072 28 GENE LOC768072 MGC136999 MGC152595 hypothetical LOC768072 EMBV3_36818 CCTTTAGACCATGAAATTTTTGCACCTTGTTTTATGTCCCTGGATATGTTCCAGTGTCTC Gene BVT0102_196418 + 0 NULL GK000018.2:47971682-48113386 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252163 TCONS_00078156 TCONS_00078157 TCONS_00078158 TCONS_00198596 TCONS_00219389 4 XLOC_155104 XLOC_047236 XLOC_120250 XLOC_132708 NonCoding TCONS_00198596 XLOC_120250 NonCoding NonCoding - 5:34255764-34256048 - TSS148164 284 0.485915492957746 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00400441763560397 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005218896.1 ZNF570 PREDICTED: Bos taurus zinc finger protein 570 (ZNF570), transcript 9e-71 269 80.76 0.992957746478873 0 noncoding AAGACACTGGAACATATCCAGGGACATAAAACAAGGTGCAAAAGTTTCATGGTCTAAAGGTTTTGAAATCATACAGAGTCTGTTCCCTTATCTTATCCCTTATGTTAGAAATCGATGTCAAAGATATTTGAAAATGACCCACATATTTTCAAGTGCAGTGTAACATTTACCAAGAGAGAGCTTTAAGTTAGCCATTGAAATCCTCATTAAAGTTAAAAGACTTAATCACCCTAGAGGGTGATTGCAGAGTAGAAAGAATTTAAATAAGAAATTAATATCTAAAT TCONS_00191577 TCONS_00191578 TCONS_00191579 . 3' 55820 TCONS_00191577 TCONS_00191578 TCONS_00191579 . 3' 56103 EMBV3_19649 GCTGGGATGGCCAAAGTACTGGAGTTTCAGCTTTATCAGCAGGTACCCACCAGTTGACTG Gene GeneID:100297795|LOC100297795:XM_002689200:83_cdna Constitutive 0 NULL GeneID:100297795 7 GENE LOC100297795 NULL similar to pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha EMBV3_21711 GCTAGGCAGGCCTGAGCGAAGAACAAACATAGGTTTAGCTTGTCCCTATTGAATAATAGG Gene GeneID:537010|STRN:XM_002691282:361_cdna Constitutive 2 NULL GeneID:537010 11 GENE STRN NULL striatin, calmodulin binding protein EMBV3_07939 TCAGACCCATCTCTTCAAGCTCTTGAGTCCCACCAGATGCGGACTTGGATGTAACCAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24054 GAAGCCATGTTTCGAAGACCTGTAGTACAGCTCTGAATCGCGTGCAGTTGCTCGGTCGAG Variant GeneID:515765|SSBP1:NM_001037466:667_cdna 112^172 1 EMBV3_28489 GeneID:515765 4 GENE SSBP1 MGC133588 single-stranded DNA binding protein 1 EMBV3_26099 ATCAACCCCTCTCTCACCGACTTTGACTTCCAGGGAAACCTGTGGGAACAGCTGAAGGAT Gene GeneID:516724|FOXN1:XM_002695745:440_cdna Constitutive 0 NULL GeneID:516724 19 GENE FOXN1 NULL forkhead box N1 EMBV3_38201 CTGAGGTCCAGTGCATCCTGGCCAACCTCATCTACATGGGTCACATCAAAGGCTATATCT Gene GeneID:617943|PCID2:NM_001038585:69_cdna Constitutive 0 NULL GeneID:617943 12 GENE PCID2 MGC134358 PCI domain containing 2 EMBV3_29565 ATAAGTAGCCAACTTCATTCTTGCACGTAGATGTCAAGTTCTCCCAGCAGCTGTGTTGGG Gene GeneID:528650|TBCK:XM_002688086:135_cdna UTR3_Alt 2 NULL GeneID:528650 6 GENE TBCK NULL TBC1 domain containing kinase EMBV3_29375 TCGGAAGCAGGAAGCGGAGTGGAAAGAAAAAGCAAGCAGGCCAAAGATGTCTCCCGCATG Variant GeneID:281078|CLTA:NM_174022:8_cdna 501^759 7 EMBV3_01165 GeneID:281078 8 GENE CLTA CLTA2 MGC140767 clathrin, light chain (Lca) EMBV3_21590 TTCCCCCATGGCGTATACCACCACAACTTTCTGGAACCATCATCAACCCTTGGAACAGAG Gene GeneID:617600|RAB3C:NM_001046606:24_cdna Constitutive 0 NULL GeneID:617600 20 GENE RAB3C MGC137416 RAB3C, member RAS oncogene family EMBV3_25265 AGACTTGTTCGATTGGTTTTAAACGACTGGTTTCTACAGTTGACTTGTAAGGGTATCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22215 CATTCAGGGAGCACTGTAGATGACAGATTTCAGTTTTACTCTGACGGTGGCGGGGGGTGG Gene GeneID:788066|TPK1:NM_001080370:763_cdna Constitutive 2 NULL GeneID:788066 4 GENE TPK1 NULL thiamin pyrophosphokinase 1 EMBV3_12356 TTGGATGAGTGGAACCCCAGGAAGTCATGAAAGGGTGATGAGAAAGTGAGGGAGGAGAAG Gene BVV0102_127342 + 1 EMBV3_42902 GK000008.2:43197990-43377721 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08490 GTCCTTGGCCCCGAATATTTGTAAAGTTATTTATCGACCCCCAGAGCCATGTCCTGTCGC Gene BVV0102_026260 + 0 NULL GK000006.2:109704042-109710994 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30408 TGGCCATAGTCAGTCACCACCGTACTTCCCAAGATAAATACTCTCGAGCCACGCCATGAG Gene BVV0101_019055 + 0 NULL GK000024.2:59845853-60351643 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12510 GTATAGGGAACTATATTCAGTAACTCGTAATAATCTATAATGGAAGAGAATCTGAGAAGG Gene BVV0101_050967 + 1 EMBV3_19284 GK000026.2:35437040-35576491 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00154035 1 XLOC_093796 NonCoding TCONS_00154035 XLOC_093796 NonCoding NonCoding - 26:35487335-35488360 - TSS115205 1025 1 TCONS_00154035_1 40 0.410731707317073 1 0 0 0 0 0 0 0 0 0 0 0 0 3.48847252484547e-06 0 0 0 0 0 0.000587492657593552 0 0 0 0 0 1.63557410448791e-05 0 0 0 0 0 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 8e-91 338 95.71 0.20390243902439 0 noncoding 0 0 0 0 -0.0256533125128167 0.847582060757125 0.000383136756600941 0.995938135427261 CCACCAGGCTCTCCCGTCCCTGGGATTCTCCAGGCAAGAACACCGGAGTGGGTTGCCATTTCCTTCTCCAATGCATCAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCGGACCCTCAGCGACCCCGTGGACTGCAGCCTTCCAGGCTCCTCCATCCATGGGATTTTCCAGGCAGGAGTACTGGAGTGGGGTGCCATTGCCTTCTATACATATATAAAATAGATAGCCAACAAGGACTTACTGTATAGTATAGGGAACTATATTCAGTAACTCGTAATAATCTATAATGGAAGAGAATCTGAAAAGGAAATTATATGTATGTATATTTATACAACATTGTAAATAACTATACTTCAATTTTAAAAATTAAAAATAAAAATAAAAAATACATTTTTTAAAAGGTGCCATTATAGCCATTCATTCTGGGTAACAGATACATGGGTTTTCATACTACCATTTTATCCACTTTTGTAGATAGTAAAATAGTTTACTAAAAAAATTAAGTTGCACAATCTTTTGATTTTACTAAAAACAACTAAAATGTTCACTTTAAAAAGGTAAATTTTACGGTATGTGAATTATATCCCAATAAGATAAAAATGCAACCATTATGCTTTCCAAATTGGAGATGGAAGAAATTTGAAACAGCTAGGGAAACAGTCATTTGTTCAAAGCCAAATAATATGTCCTTGGAAAAATGCACAAATGTGGGCAAAAGCTAATGCAGCAGTTTATCCCCTCCAGTCATTAAATTAAAGACAGAATAATTACAAAATCCTTTTATTCTCTTGGCTTAAGGAGGGAAATGGCAGAGGAAATAGCCAACAGCTTTTGATGACTTTACATGAATAGATATGGGTCTTCTTTAGTCCAATTACCCTTTACTAGCTGTGTTTTACCTCAAAACTGAAAAGGGAAAAAAAATGACAATTTCAAGCATAAACTCTGAGCTGGATCTATAAGGGACAGAAACTGAAGCACAGCTGGGAGAATGAGGATTTCTGGATGACAAAGGAAAGG TCONS_00150926 . 5' 87978 TCONS_00150926 . 5' 87978 EMBV3_12084 AGCTGCAGGAGACCCAGCACCTGCTTCATGATTAACCTGGTGATTAATCCTAAGGATTTG Variant GeneID:534354|MTRF1L:NM_001046378:12_cdna 301^728 5 EMBV3_18827 GeneID:534354 9 GENE MTRF1L MGC137648 mitochondrial translational release factor 1-like EMBV3_26796 CACAAAGAAACACACCTTTCATGCTATGCCAGCATTGTCCTGCTTGTGCCGATGATGTGA Gene GeneID:541180|FEM1C:NM_001101219:42_cdna Constitutive 2 NULL GeneID:541180 10 GENE FEM1C NULL fem-1 homolog c (C. elegans) EMBV3_02498 CCTGCTCTTACAAGTTTCCAATCAGCTGTTCAAACAAGAATTTTGTTTCCAAGTGGAAAC Gene GeneID:767819|GSG2:NM_001076544:186_cdna Constitutive 0 NULL GeneID:767819 19 GENE GSG2 MGC137325 germ cell associated 2 (haspin) EMBV3_04588 GAATCCGGAATCCCCACGGCAATCAGAACGACAGTTGACAGACCGAAGGACTGGTACAAG Variant GeneID:614391|SORBS2:NM_001079787:79_cdna 675^861 3 EMBV3_43456 GeneID:614391 27 GENE SORBS2 Argbp2 MGC157359 sorbin and SH3 domain containing 2 EMBV3_08487 GGCAATGTTCATTCCAATCAGATGCAGCTTTCTCCTCCGTCTGGTCTCCTATTTGCAATT Gene GeneID:534705|TLK2:XM_002696061:381_cdna UTR3_Alt 3 NULL GeneID:534705 19 GENE TLK2 NULL tousled-like kinase 2 EMBV3_34108 GCTCCCTCCCCCTCGCCCGCCGTTGTAAAATAATCAGAAACTTGTTCTATTTTGTGGCAG Gene GeneID:507057|PHF12:XM_002695669:178_cdna Constitutive 1 NULL GeneID:507057 19 GENE PHF12 NULL PHD finger protein 12 EMBV3_22595 CTTTTCCGGGAGGCTTATGCTGCCATCGAGACTTACCATCAGACCCCACCACCCACCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19959 CTGGTCGCTGGAACCTACACATGGGGTGGACTGTGTTCCTTGACTATCACGTGTTCTCTT Gene GeneID:789281|LOC789281:XM_002693613:129_cdna Constitutive 0 NULL GeneID:789281 15 GENE LOC789281 NULL similar to hCG41016 EMBV3_33048 ATGAGAAGACCCAGAGTTCCCATCTTTCCTATTTAGGGACAGGCCTTGGATATTCTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04254 GGTTCCTGCAGCTCAAGCTCCTTTTTTGCAGGTTTCTACAAAGTGTGTTTCTCCGGGTGG Gene BVV0102_400059 - 1 EMBV3_08115 GK000001.2:179714-264297 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15006 ACATGTTGGAGGAGCACCAGAGACTCACAGTTCAGGCCAAATTACAGACAATAAAGAACG Gene GeneID:525695|LOC525695:XM_002690408:78_cdna Constitutive 0 NULL GeneID:525695 10 GENE LOC525695 NULL similar to laeverin EMBV3_12664 TAAGGAAATGGAAGAAAATTTGGTAATCTAAATCACCAGCATTCAGACACACAGTTTGGC Gene GeneID:616730|KLF11:XM_002691483:373_cdna Constitutive 2 NULL GeneID:616730 11 GENE KLF11 TIEG2 Kruppel-like factor 11 EMBV3_26979 CCAGCTCCGCGACGCCGCAGCCGCCGCCGATTACGTGGCTACACCACTGGCTGCCCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10017 TATGGCCGCTGGCAGTATCCTCTCACCTATGGACTGATTCTTATTCCCTGCTGGTGTTCT Gene GeneID:516881|SGPP1:NM_001077931:118_cdna UTR3_Alt 2 NULL GeneID:516881 10 GENE SGPP1 MGC142448 sphingosine-1-phosphate phosphatase 1 EMBV3_20008 CTGAGGCTTCCTGGGAGTTCTGAGAGGGGTGGGTGGATTTTTAGGTTATATGTTTTCAGT Gene GeneID:511955|SLC43A2:NM_001075546:103_cdna Constitutive 0 NULL GeneID:511955 19 GENE SLC43A2 MGC140534 solute carrier family 43, member 2 EMBV3_21570 TCAAAGTGGCCTTCAAACCAATCAGTTGTCAAACATGGGACTTCCCTTCGGGTCCAGTGG Gene BVT0102_219310 + 0 NULL GK000003.2:16561837-16633873 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18935 CTGGGGAGAAGCCATATGAATGTCACCTGTGCTGGAAAGCCTTCACTGATTCTTCTGTCC Gene GeneID:511959|ZNF596:NM_001101948:2_cdna Constitutive 0 NULL GeneID:511959 1 GENE ZNF596 MGC151913 PRDM9 zinc finger protein 596 EMBV3_28897 GGACTAAAGTCTGGATCATTTATATTTTCCTGTAAGAGGCAGACTGCTTTCACCCTTTTT Gene GeneID:281626|ANXA5:NM_001040477:34_cdna Constitutive 2 NULL GeneID:281626 6 GENE ANXA5 MGC126971 annexin A5 EMBV3_16034 AGACTGCGGTCCATTCTGCCTGCAGCTCCTGCTTCCGGGGTTATTATTGGTGCTGATAAT Gene GeneID:789682|LOC789682:XM_002696100:168_cdna Constitutive 0 NULL GeneID:789682 19 GENE LOC789682 NULL similar to Mast cell antigen 32 precursor (Mast cell Ag-32) (MCA-32) EMBV3_18704 AAGAGTGAGGCGAGAAGCCTGAGCAAGTGAGGATGCAGCAAGGGAGGGTAGAACCATTTA Gene GeneID:614849|C15H11orf59:NM_001034769:28_cdna Constitutive 2 NULL GeneID:614849 15 GENE C15H11orf59 C11orf59 MGC127399 rhoA activator C11orf59 homolog EMBV3_12412 AACTCTGGACACCAGATAAAGGGAGATGCTGGTCACTCAAGAGTCCTGGACCATTACAGC Gene GeneID:538697|STARD13:XM_002691805:451_cdna UTR3_Alt 2 NULL GeneID:538697 12 GENE STARD13 NULL StAR-related lipid transfer (START) domain containing 13 EMBV3_42481 TGGGCCTACGTGTCTGTGGTTGGAAGACAAAAATGTGTCAGGCAGGGCACCTAGTAGTGA Gene BVT0102_336802 + 0 NULL GK000011.2:49244104-49244483 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12971 AGTTGCCCCAGAGCAGTCCCTTCTTGTGGGTGCCTCATTTCTTTGGGTAAGAAGAGCCAA Gene GeneID:615340|IRF5:NM_001035465:24_cdna Constitutive 1 NULL GeneID:615340 4 GENE IRF5 NULL interferon regulatory factor 5 EMBV3_30426 CATCACACCACTGGCATCATCCTTGTGTAGGCACTCGGAGCAGAGGTGGCTGTGTTAATA Gene GeneID:538763|YDJC:NM_001102221:91_cdna Constitutive 1 NULL GeneID:538763 17 GENE YDJC MGC159810 YdjC homolog (bacterial) EMBV3_29035 GTCGTGAAATCCCTAGCAACAAGTCACTGGATTTTTCTCTGTCAGCACGCGTGTCAGCTG Gene BVT0102_111324 + 0 NULL GK000021.2:49682141-49746538 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121477 TCONS_00121476 1 XLOC_073420 Coding TCONS_00121476 XLOC_073420 Coding Coding FBXO33 21:49743212-49765947 j TSS90488 4599 1 TCONS_00121476_2 363 0.142422265709937 4 0.797879827571039 0.00110531485985911 0.00145645159300859 0.00087576846370061 0.00083701936546462 0.00140367445934269 0.000434736543127862 0.00100283848263278 0.00105148846134585 0.00196574701045902 0.00178518847035586 0.00126494952196085 0.00070082705107491 0.000297046737698007 0.00296335709848107 0.00126635575942912 0.00247888954817348 0.0019596377493893 0.00116542006111084 0.00262282955582508 0.00249244466849487 0.00086419316798979 0.00127986180797894 0.000997709659616112 0.00205380141050642 0.00174788356813143 0.00172350378348184 0.00120758586763993 0.000442517665745812 0.000348308977906537 0.000724849637462482 NM_001205749.1 FBXO33 Bos taurus F-box protein 33 (FBXO33), mRNA. 0.0 2100 100.00 0.252881061100239 NM_203301.3 FBXO33 Homo sapiens F-box protein 33 (FBXO33), mRNA. 0.0 4589 83.74 0.90150032615786 TCONS_00121476_2 sp|Q7Z6M2|FBX33_HUMAN FBX33_HUMAN F-box only protein 33; 0.0 711 96.90 0.975206611570248 0 coding 0 0 0 0 1.86757245247875 0.00918793099337029 0.0523492398239455 0.348355621951774 ACTCCTGGCGCCTTCCAGGCACTGTCTCATTCATCCTTTCGGCAGCAGTGGGATGGAGTACAGGCGCGGTCATTCTTCATTTTACGGATGACAGAGCTGAAGCTTGGAGGGAACCTCCAGAAGTTTAGCCTTTTTGGAGACATAAGCGTTCTACAACAGCAAGGAAGTTTGTCAAATACATACCTCAGCAAGGTGGACCCTGATGGCAAAAAAATTAAGCAAATTCAGCAACTGTTTGAAGAAATACTGAGTAATAGTAGGCAACTGAAATGGCTGTCTTGTGGGTTTATGCTGGAAATAGTAACCCCAACGTCACTGTCATCTCTCTCAAACTCTATTGCCAACACCATGGAGCACCTGAGTTTACTGGACAACAATACTCCTGGTAGCAGCACCCTTATCACCGCAGCAGAACTGGAGCGATTTGTGAATCTGCGCTCACTTGCCCTGGATTTCTGTGACTTTACAGCTGAGATGGCTAGAGTCTTAACCGATAATAACCATGTGCCTTTGCAGCGACTTTCTCTCCTGGTTCACAATGTTTCCGTGATGCACAAGTCTCTGGACAATATGCCAAATGATGAGCATTGGAAAGCCTTGTCAAGAAAGAGCACCAGCCTTCGGGTCTATATTATGGCTTTTGATATGAAGAGTGAAGATATGTTAAAGATTCTGAAACCCAGTATACCACTAGAGAGGATTCATTTTGACAGCTACATCACTTGTGTTTCAGGAGCTATTGTTGATCTTATATCTAGGCAGTACGACAAGTTCCTCACTCATTTTATATTAATGAATGATATGATTGACACGTCTGGTTTTCCAGATCTTAGTGACAACCGAAATGAAGATCCGTTGGTTTTATTAGCATGGAGGTGCACAAAGCTCTCTCTTCTGGCAATTCATGGTTACACAGTGTGGGCACACAACCTCATAGCCATTGCTCGTCTTCGTGGCTCTGATCTAAAAGTACTTGAAGTCACCGAAGAAAGCATTGATTTTGACCAAGGTGAACTGGCCGACCAGGATGTGGATCCAGTGCATAATCTTATTGAGCAGGTGTCCCTGGGCCTCGGTCAGCCTTGGCATGCAGTCATGGACATCGAATCACTCAGTGTCTTCACTGAACCAAATCGTCATTTTTACAGAGAGATGCAGAGCTTCAGCGAAGACGTTTAGCTTTTTTTTAACGTACAATTCCTGTGGTTACATTTGCAAGTAGGGTCCTATTATGTTTTTTTTTTTTCTTTTCCAGTAGTGTGAATTAACCCCTTTGTGCTGTGTTTAATCAGTATTAGCTTTATAGAATTATATGTGTATATTCTACTTCTTGATCAAAGAACATAGTCGGGTATTGGTTTAGAAGTTCAAAGTGACACTGTATAGGGCTTTCACGGTTAATGGACTTGTTACCAGACCTTAAGAATCTACAACCGAAGGTTGTCTGAGGTTGCTGGCTAACTGTTTTTCACTGAGTTACTCTGCCTTTTGATGTTTTTATTCTTTGTGTGTCAGAGCTCAGGAGCCAAAATATTTTTATACATATATAGATATATATCCATAGCCTGGTGGATTTGTATGCAATGCACTGCATTCATTCATTCTGATAGCATTTCATTGATTTTTATTTGAAATGGAAGAAGGGAGGATACTATGATCCCAAATGAGTCATCTTTAACAGAAAAGCCAAGACTTTAACTTTCATTACATATATAATAGTCAATTATCATTAATTACCACTCTGAATTTTATATAGTAGCAGGTTAGAACATTGCTTAATCCTTTTTGAAATGCATTTGTGTAAACATGAATACTCAAATTATTGGATTTTTCCTAACTGTATCTGACATAATTTAATTCATCAATTACATTATACATTCAAGTTAGCTTTTTAGCCCAGATTTCAAATAGTGGAGGAATAAAGAAATAATATTCCAGGGTAAAACCTCCTAAAAGAATATCATGAAATCACAGAGTTGTAAACACACATGCTTGCAAACAAACATTAGTCGTGAAATCCCTAGCAACAAGTCACTGGATTTTTCTCTGTCAGCACGCGTGTCAGCTGCCAAAGAATAGACTTAACTGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCCACTGTGGCCAGCCAGATACTGCTAGATTGTAATATTTAAGGTCGAATTTCGACCTGTGGTACACAGCTGTGCTGTGGCTCAGTCAGCAACCTCAGATCTCTGAAAAAAAAAAAACACAAAACAAAAAAAAAAGAAAAAAAAAACCATGCACCTGTTTCACTGTGAATAGTGAATGTAAAGGAAAAAAACGGAAAAACTGAATGCTTGTTCTATCACAGGTATGAGCTGCTATGATAAATGAAGAACATTCCATGAAGTATGTTTTAAAACCTTGTTATATCTGAGAGGCTTTAAAAGCCGACTTAACTGTTTCAGGGCAACCGCGGTACAGACGTGGTCTCTGTGAGACTTCCACCTGACCCCAGTTTTAAGTGGTACGAATGTTGTGCATTTAATGTTAAAGGACAGTCTGCAATAATAAAGTAAGTAGCCAACGTGGGTGCCCAGCAGTGCTGAGACCTGGCTGCTCTATTGTAAGCTTTGGAAACACAATTTATGCAACAGATGTCCAGATATGATTCTATTTATGGAAAAAGTTTATATGTATTTTACAAATGGTTTTACCATCTTATATTAAAATGACCTTTTGACAGGTGTGCACTGTTTTGTCTCCAGTGAGCACATACCATGCAGATTTTTTATGTACATCAGTAGTGTGAATCCACTGGCACAGGGTGTGTAAATGCCAGATGTGGTGAGATTTTATCTTATAAATGTGATCAGATAAAATAACTCCTGACAGAAACTGTAAGGAAACCAGCTGAATGTTTGACCTGATGACTGATGTTGTATGGTTTATGTTAAATGTATATTCTTTTAATCAATGAATAAAGCATTAAAAAGTGATCATTGTAACATTTTCTTGTTCATGAAGCATGAAAAACCTTTAGTGTTAAATAAACTACAGTAATCTTAACAATGTGTATAATCATGTTAGCTCCTATTGGTAGTCTGGTGCAGCAAAGCTTAAATTTGAACAATTTGGAGAGTTTTGATTTTTTTTAACGCACTGTGGCAAAATATAAAACAGACTGGTTACCACCAAATCCAAGTGTATTATGTATTTAGAATACATTATTTATAGACTATAGGAACCTACATTTAAAAATTCTTCTACTGGATGAAAAGGAAAAAAAAACATTTCAGTATGCCAGTACTAAATAGATCTTAAACTTCTATACTGCTTTAGTTTAGCTTTGTAATCTCCATTCTTGGTTGTTAAGACAAACAGCTGTCATTCCTTCTTCCTTCTCTAATCATTCCAGACACCACTTCTTCCAAGCACTGCCTCATCATGGAATAATCTGGGGTTCACAAAGAACTGTTGTTATATCTATTGCTCCCTCATTTCGTGGATACAACTCCTTTGGATGAATCAACATGTCTGTGTATATAAAAGACTAAAACAATACCTAAAATATATGAAAAAAGAAAGTCAATGAATATGTACATAAGTGAAGTTGTATGTAGTAAAGCACTAAACTGGGGGGTGTTAACCTGTTTTCTCCACTAAGCTCTGACTAATGCTACATGAGCAGAGCACAGATTCTTGAGCCTCAGTTTCCTCATCTGTGATATGAGGGATTTGCCTAAAACTGATTCTTCATTTGAAAGTTTCAGCTGATGTTAGTCTGACAGCTTATAGACAAATATTTATTTTCAAAACACAACTTACTAAACTATATGAAATTTGCATATCTAAAATTACTTTCCTATTTCCTCCACCACCCTGGGAATAGAGAAGTTAGGGAGTTGGTAGGGCGGGGCTTCGGAAGGACAGTGTGCTTATGACTGAACACATAGATTCAGCACCTAACTTGCTTGTGGCTTATCCAATAGCATGAACCAGACTGGGTTGTTATGAAGCTAGTAACATTAAATGAAACGGATGGAGTAACATACAGTAGGTGTAAATAATACCCAACAGTCACACTACATTGTCTGTATCAAAGCTTCCTAAGCTTTTTCATATGCTGACACATAGAAAATATTATGCAGCACACTGATATAACAGAAGGAATTGAAGCCAAAAAAAAAAATCATTGTTTTCATTACATAATTAGAGAAATGCAGAAGGTTGATGGAAATAATTATTTGTATAGAACTTTCAAATAAAATCTTTTCAACTGTTCTAACTTATAACCTATTAAAATTTTAATGTTCCCACCAAGAGGAACACCCCACAAATGGATGATAATTTTTAAACCTTACCATCCACAATATCAAACATGTATGCAGTTGAAATTATACTTACAAAATCTAACAGCTCTAAATGTAATGGTAAGTGTAATGTTGAGCTTTCTTACATAATGTAAGTTAATTTTCAAATTCAAGTGATTTTTTTCACTATTAAGTATTTCAAAATAATGAATGCAACTCTAATTTGTACATACGTAACTCTGCTGCTAGTTGAGCCACTGTTCACACAGAAATACCTGATTTATATGGAAGCAATTCAAGGCCTGCAGGAAGCCCTGC EMBV3_16779 AGAGAAACCAAAACCAGGAAGGCCAAGTCCTGTCTCTGTGGTGCGTGTGGATGACTCCAT Gene GeneID:540583|RAB30:NM_001076229:37_cdna Constitutive 0 NULL GeneID:540583 29 GENE RAB30 MGC140719 RAB30, member RAS oncogene family EMBV3_08781 TACCCATGCCTCCAGACCCAAACTTGGAACCTCAACAACATCAACCTTGTCTTCCAGAGC Gene GeneID:515838|ANKRD31:XM_002690414:95_cdna Constitutive 0 NULL GeneID:515838 10 GENE ANKRD31 NULL ankyrin repeat domain 31 EMBV3_22435 CTTAAGAGATGGTACGTCCTTTGACTATTTGGAACTTGCTATGCCTTGCTGGGGTGGCTG Gene GeneID:404066|TMEM43:NM_001102480:13_cdna Constitutive 0 NULL GeneID:404066 22 GENE TMEM43 MGC165694 transmembrane protein 43 EMBV3_09082 CCCTGCTCCTTAACAGCTGGCTGGTTCCTTGCAGACCACGATGGATAATGCTGAGTTCTA Gene GeneID:517133|LOC517133:XM_002695700:288_cdna Constitutive 0 NULL GeneID:517133 19 GENE LOC517133 NULL similar to UPF0378 family protein KIAA0100 precursor (Breast cancer overexpressed gene 1 protein) (Antigen MLAA-22) EMBV3_31480 TGCTGAAAATCCCAGAGGTCTTGATATAAGATCCAAGGCTTTCCCATCAAGGGGGGACAA Variant GeneID:510390|LOC510390:XM_002689372:20_cdna 572^809 2 EMBV3_26685 GeneID:510390 7 GENE LOC510390 NULL similar to Vacuolar ATP synthase subunit S1 precursor (V-ATPase subunit S1) (V-ATPase S1 accessory protein) (V-ATPase Ac45 subunit) (C7-1 protein) EMBV3_15681 GATCCGACACAGTGCTTCTGAGCAGGAATCATGAGGAAGGGAGTTAGGGCACCTTCATGA Gene BVT0102_282470 - 1 EMBV3_31002 GK000009.2:61743749-61758419 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235665 TCONS_00235662 TCONS_00235663 1 XLOC_144276 Coding TCONS_00235662 XLOC_144276 Coding Coding RRAGD 9:61644176-61746169 j TSS176579 3949 1 TCONS_00235662_1 333 0.033932641174981 7 0.961349909796847 0.000504001325826226 0.00205867956710817 0.000859157489675437 3.66612652623261e-06 0.000421175858804123 0.000335048832280926 0.000696348301551125 4.11233143167284e-08 0.00133727676868192 0.000301078302604197 0.0001799008952678 6.68491451993573e-05 1.50392312724896e-09 0.0021841797394142 0.00110899670201783 5.42809971061948e-07 7.75454517740823e-12 5.05660835563586e-06 7.82316392128464e-07 0.00182035527241658 0.000370263664494375 0.000380277156331272 4.37506611153133e-05 8.98036361593543e-07 0.00142899674510365 0.00171350509304232 0.00137176473929194 3.84765672215674e-05 4.81206707988701e-07 3.96574194838625e-06 NM_001192828.1 RRAGD Bos taurus Ras-related GTP binding D (RRAGD), mRNA. 0.0 2637 99.93 0.370726766269942 NM_021244.4 RRAGD Homo sapiens Ras-related GTP binding D (RRAGD), mRNA. 0.0 2654 82.33 0.665484932894404 TCONS_00235662_1 sp|Q9NQL2|RRAGD_HUMAN RRAGD_HUMAN Ras-related GTP-binding protein D; 0.0 685 99.70 0.996996996996997 1 coding 0 0 0 0 -0.228951501060933 0.198526622741666 0.0115549440370906 0.842612905036127 CCTCGGCCCAGCGCCCCAACGATCTGTGCCTGCACCCGGGAAAGCGCGCTCGCTCCCGTGCGGGTTCTGGACTTTAGCGACCCCTTCAGCACAGAGGTAAAGCCGAGGATCCTGCTCATGGGCCTAAGAAGGAGCGGCAAGTCATCCATCCAGAAAGTCGTCTTTCATAAAATGTCTCCCAACGAAACTCTGTTCTTGGAGAGCACGAACAAGATCTGCCGGGAGGACGTTTCCAACAGCTCCTTTGTTAATTTTCAGATTTGGGACTTCCCAGGACAGATTGACTTTTTCGACCCTACCTTTGACTATGAGATGATCTTCCGAGGAACAGGAGCACTGATATTTGTCATAGACTCCCAGGACGATTACATGGAGGCCTTGGCCAGGCTCCACCTCACAGTGACCAGGGCCTACAAAGTCAACACCGACATCAACTTTGAGGTGTTTATTCACAAAGTGGATGGTCTGTCAGATGACCACAAAATTGAAACCCAGAGAGACATTCACCAGAGGGCAAATGATGACCTTGCAGATGCTGGGCTAGAAAAAATTCATCTCAGCTTTTATCTGACAAGCATATATGACCATTCAATATTTGAAGCTTTTAGCAAAGTGGTTCAGAAACTGATTCCACAACTTCCCACCCTGGAGAATTTGCTAAACATCTTTATCTCAAATTCTGGAATTGAAAAGGCGTTTCTCTTTGATGTGGTCAGTAAGATTTATATTGCAACAGATAGTACCCCTGTGGATATGCAAACGTACGAGCTCTGCTGTGACATGATCGATGTGGTCATTGATATTTCGTGTATTTATGGCCTCAAAGAAGATGGAGCAGGAACCCCCTATGACAAGGAATCAACAGCCATTATAAAGCTGAATAATACAACAGTTCTTTATTTAAAAGAGGTGACAAAGTTCCTGGCTCTTGTGTGCTTTGTCAGAGAGGAAAGCTTTGAAAGAAAAGGGCTGATTGACTATAATTTTCATTGCTTCCGGAAGGCCATCCATGAAGTTTTTGAGGTGAGAATGAAAGTAGTGAAATCGCGAAAGGTTCAGAATCGGCTGCAGAAGAAAAAAGGAGCCACCCCCAACGGGACGCCTAGGGTGCTGCTGTAGGTGAGGTTTCAGGAGCATCTTTTGAAATCAGACGTTTCATTGAAGCTGCTGCTACGTGTTGCACTAAAGGAAGAGGAGGAAGAAGATTGGGACACAAGACATACGTTTGTTGTAAAAAACTCAAGAAGAAGAAGGAGATTGGGACATATGACATACGTTTGTTGTAAAAAAAAAAAAAATCCTGCCACCCTTTCTTTTAATCTTCTCTTTTTTAAATAAAGTAAGCACTTTGAAGCAAAAACTTGTATATTAACAATGAAGTGAAATCTACTGTTACTTCATTACACAAATGTAAACTTTTATGGTCTGTAGTCAGAAAAAATCCTGTGTTCGTACTGCCAGGAACTGTATATATTTTGCACTTTTTCATGTTTTCTTTTTCTCATGAAACTAAACTTTGATAAAACAACTTTTCTAAGCTTTGTTCTGTCCTTGGTGTCTAGGACATGCATACTGAGTCCATATCTATGGGGCAAATGGAAATTAATCAAAAAGTGATGGATAAGCAATGACTTTTTTAAGCATGAGAATCTTTGCTACCAATTGTTGAGAAAAATCATTTTTCCATGGAGGAACAGCTTGGGGCGGCAAGCTCCAGGAGCAATAAGACCTGTCCCCTGTTTATAATGGATATAAATAGAAGTTTTATAGAATAATATTAGCACCAAACTTATCTAAACATTTCTATAGCTCTGAGAGTGCTTCCCTACCTGACAGTTTTTATAAAACTCTTTACCTCAACAGACATCTCTAAACTCATTTTATACAGAGAGGTTCTTTCTTTCTGTTGTGTTACTGTTGTCCTTTGGGACCATCTTTCCAAAATGGTGCCCATCACTGGAGAGAAATTGAAATGTCGCTGAATTGCAGGGTTTCTGAAGGCTTTTCTGTACCTGCCACCCAGGCTAAAGTAATATCAGAAGCTACGTGGTTTCCCAAATGGAGGTGACTGGCAATTGCAGATTTAAAAATACATCCTATACAATTTTTCGCCTCTGTGGAATGGGCCTCTTGCCATGCAAGAATCCAAATGTTTATTTAGGACCAGTTTCTTTCTTTCTTTTTTTTACACTGCTCCACAACCACAGGCAATATTTCAGTTCTCTGCCACAGAACTGAATCCTGGTGGGCATCTTTGTCACCTCTGAGTCTCCTCAGCTGTGACAGTGTGCCTCATGGACTCTGCTTGTCCCCACCTTACGACTGAACTAGGGCTCAGCTCGCCAGCAGCATGCTCTGCATGGCTAAAAAAGCCGTCCTGAAAACTGCTGAAGGGCAGTGGGCGAGGGTGACCAGAGGAGGCATTATAGTTAGCTATGTGTCTGTTTCTATGAAATTCTTCCTCTTATGTTTACATTAGACCAACAGCAAGTGAAGAGATTCTAAATCTACCCCCATCCCAAACCATTCCAAGTAGATAATTCTAGGTCCATCCCAAGGCTCAGTGCCTAAAGCATGTTGGCGAGTATTAGAAAATATTCATATGTATATATTTTTAGCAGAGCCTCGTAGGGATAGCAATGCTGATCCTAGCAAAAATGGATAGTTCCTAAAGCAACTTTTCCGTGAGACTGTCTGTGGCTTCTTTCTATCCTCTCCTTGTCCATTCTTCCCAAGTCCTATTCCTTTGAGGCTGGAAACTGCAATTTAAGGTGGTAGCTGATTTAAGGCTTGAGCCCTCCCAAGGATCTGTGCATTTTGGAAGGAAATTTGTAAAAATCATGAAGGTGCCCTAACTCCCTTCCTCATGATTCCTGCTCAGAAGCACTGTGTCGGATCCCAGGGCTCCAGGGAAGTCTTTTTTCCTAATTTCCAAACCTATAACCTGTTGGGCCTTTGCCAGCATGGTACCTGGAGGCTATTCTTACAAATCTAATTCTTTAATACTTTTTACACAGTGTTTCTTTCTAAATACGCAAATACAGAATCACTTTTCTAAAACAACTTTATCCTCAAGATAGAGACATTTGCCTAACTGGTAAATCACACGTTACTTAGGTATATATATTAATTGTAACTAGGTGGAGCTTCCATTTAAGCTGGGTATATGATGGGCTTTGTTAAAATGTGCCTTAAATGCCTACTACTTCAAGAGCAAATGATTCTTTGAGGGAAAGGCAAAGTTAATGCTATGGCATCAGACCCAAGTTCATGGTAGTAAGTGCACTCTTTGATTAATGACACTGATATATAGACTACTGCCTCAAAGCCATCAGCATGGCGATGACCTCTTAGTTAAAGAAAATGTAGGAGTTATGTCTAAGCATTCAGTTTCTGAACTCTGTGCTATTGGAATCACAAAATCTCTTCAATTCCTTTTTCACTTGTTTTTGATACGGGACTTAGCTTTCTTGTGTGTGATCACTTTCACGTCTCAAATCCACAGCTATAAATACATATAAGTATACAAAATAATGTGTAAATATGAAGCTCAAATACATGGCTACGGTGACTGCTCTGGAATATTTCTGCTCATTTTCAAAGGTTGAGAACTTGACCTAGAGGTTTTCAGGGCAATTAGAAATTACATGTGGGGGTGAGACTCTGAATTATCATCTTTATTTAGTTTCAGTAATATAGATTAGCATATATAGCCAGAGTGGCATATTTCTTTTTTTTTTTTTCAGAGTGGCGTATTTCTGATGGTTTAGACATTAAAAACTGGTTGACATTCACAGACAGTACTATTTTGTGAATATAATATATTTTGGACCCTTAAATATAAATAAAAACACAGCAATATTGTTATGTACGGGTTATATGCGAACTCTGTTTGAAATATATTCAAGAAAAACAGCTGAATTGTCTTGATTATTAAAGTATGGTATAC EMBV3_06611 TGACTACTGCTATCAAGTAAGTTTGTTTCTCTGCCATATTTAAGATACAGAAGCCAGGGC Gene BVT0102_118645 + 0 NULL GK000020.2:23261618-23305805 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113534 TCONS_00113537 TCONS_00113535 TCONS_00113536 1 XLOC_069060 Coding TCONS_00113536 XLOC_069060 Coding Coding IL6ST 20:23212609-23274582 j TSS84909 7266 1 TCONS_00113536_6 918 16 0.883011682695411 0.000121706457327175 8.68689710545272e-05 5.92776015645889e-05 0.000131343057486914 7.52031245210004e-05 1.42813813242626e-05 0.000102375806910832 2.96848959676731e-06 0.000276309235732414 4.28034279498417e-05 7.24996431981545e-06 2.40929846356272e-05 2.7894948502441e-05 2.26002819696508e-05 1.23118486570184e-06 0.00878437939192069 0.00492743951045648 0.00635982055314801 0.000161890003290135 5.56967963711831e-05 9.62983565334147e-05 0.0021471479382423 0.00296837194224268 0.0060930482189018 7.32147631424506e-05 9.07744880725125e-05 0.000102036308656145 0.000263440847120938 0.000168233759809604 0.000556213698327386 XM_002696322.3 IL6ST PREDICTED: Bos taurus interleukin 6 signal transducer (gp130, oncostatin M receptor) (IL6ST), mRNA. 0.0 1.273e+04 100.00 0.971235893201211 NM_002184.3 IL6ST Homo sapiens interleukin 6 signal transducer (gp130, oncostatin M receptor) (IL6ST), transcript variant 1, mRNA. 0.0 4257 86.54 0.488714560968896 TCONS_00113536_6 sp|P40189|IL6RB_HUMAN IL6RB_HUMAN Interleukin-6 receptor subunit beta; 0.0 1619 87.38 0.998910675381264 4 coding 0 0 0 0 -0.0608633899460664 0.748396345253972 0.00845321805482957 0.872545387578683 CGCCTTGCCCCGCAGCGGGAGGAGGGACGCGTGCCGCGTCTGCTGGAAGGTCTGGGGAGCTAGCCGGAGCTGGGGCAAGGAGCCGACAGGCCCGCGGAGCCGCGCGGGGAAGGCCCGGGCGCATCTGAGCTTGGGGCCGCGGCTGCTGGCCGACGGACTCGGCCGGGCCAGGCGCCGAGTGGGACGTGTTCTGTGGAGACGCGGAGGAGCGAGTCACCGCGGCCTGAGAAATATCTATGCAAGATGTTCACATTGCAAACTTGGATAGTGCAAGCCTTGTTTATTTTCCTCACCACTGAATCTATAGGTGAACTTATAGTTCCATGTGCTCATATCCACCCTGAATCTTCAGTTGTACAACTTGGTTCGAATTTCACGGCAGTTTGTGTGCTAAAGGAAAAATGTATGGATGATTATCATGTGACTGCTAATGACATTTTCTGGAAAACAGGCCGTGTACCTGTTCCTTATGAACAATATAGTGTCATAAACAGAACAGCATCTAGTGTCACATTTCCAAATATAACTTTAATAAATGCTCTGCTCACTTGCAACATTCGTATGTTTGGACAGATTAATCGGAGTGTTTATGGAATCAGAATCATTTCAGGCTTGCCTCCTGAAAAACCTAAAAATTTGAGTTGCATTGTGAATGAAGGAAAGAAAATGATGTGTCAGTGGGATCCTGGAAGGGAAACATACCTGGAAACAAACTACACTTTAAAATCTGAGTGGGCAACAGAGAAGTTTGATGATTGTAAAGCAAAACGTGACACCCCCACCTCATGCACTGTTGATTATCCTCCTGTGTATTTTGTCAACATTGAAGTCTGGGTAGAAGCAGAGAATGCCCTTGGGAAGGTTACCTCAGATCATATCAATTTTGATCCTGTAGATAAAGTGAAGCTCAATCCACCACATATTTTATCAGTCAACAGTTCAAAGGAACTGTCTAGTATTTTAAAATTGACATGGACTGATTCACGTTTTAAGAGTTTTATAACACTGAAATATGACATTCAATATAGGACCAAAGATGCCTCAACTTGGAACCAGGTTCCTCCTGAAGATACATCATCTACCCGATCTTCATTCACTGTTCAGGACCTTAAACCTTTTACAGAATATGTGTTTAGGATTCGTTGTATGAAGGAAGATGGTAAAGGATATTGGAGTGACTGGAGTGAAGAAGCAAGTGGTATCACATATGAAGATAGACCATCCAAGGCACCAAATTTCTGGTATAAGATAGAGCCGTCTCATGCTCACGGCACTAGATCTATACAACTCAAATGGAAGACATTGCCTCCTTTTGAAGCTAATGGAAAAATTTTGGATTATGAAGTGACTCTCACAAAGTGGAAATCACATTCACAAAATTACACAGTTAAAGACACAAAACTGACAGTAAACCTCACAAATGATCGCTACGTAGCAACTCTGACAGCAAGAAATCTTGTTGGCAAATCAGACGCGTCTGTTTTAACTATCCCTGCCTGGGATTTTCAAGCTACTCACCCCATAACCGATCTTAAAGCATTTCCCAAAGATAACGTGCTTTGGGTAGAATGGACTGCTCCAAACGAATCTGTAAACAGATACATACTTGAGTGGTGTGTGTTATCTGATAAATCGCCCTGTATCCCAGACTGGCAACAAGAAGATGGTACTGTACATCGCACCTATTTAAGAGGAAACCTAGTAGAGAGCAAATGTTACTTGATAACAGTTACTCCAGTATATGATGATGGACCAGGAAGCCCCAAGCATATAAAGGCATACCTTAAACAAGCTGCACCTTCCAGAGGACCTACTGTTCGGACAAAAAAAGTGGGGAAAAATGAAGCTGTCTTAGAGTGGGACCACCTTCCTATTGATGTTCAGAATGGATTTATCAGAAATTATACTATATTTTATAGAACCGTCATTGGAAATGAAATCGCTGTGAATGTGGATTCTTCCCACACAGAATACACATTGTCCTCTTTGACTAGTGACACTCTGTACATGGTACGAATGGCAGCCTACACAGATGAAGGTGGAAAGGATGGTCCAGAATTCACTTTTACTACACCAAAGTTTGCTCAAGGAGAAATTGAAGCTATTGTTGTACCTGTTTGCTTAGCATTCCTATTGACAACCCTTTTGGGAGTTTTATTCTGCTTTAATAAGCGAGACCTAATTAAAAAACACATCTGGCCTAATGTTCCAGATCCTTCAAAGAGTCATATTGCCCAGTGGTCACCTCACACACCTCCAAGGCATTTTAATTCAAAAGATCAAATGTATCCAGATGGCAATTTCACTGATGTAAGTGTTGTGGAAATAGAAGCAAATGACAAAAAGCCTTTCCCAGAGGATCTAAAGTCTTTGGACCTATTCAAGAAAGAAAAAGTTAATACTGAAGGACACAGTAGTGGTATTGGAGGGTCTTCATGCATGTCATCTTCTAGGCCAAGCATTTCCAGCAGTGATGAAAATGAATCTGCACAGAACACTTCAAGCACTGTCCAATATTCCACAGTGGTTCACAGTGGCTATAGACACCAGGTACCATCAGTCCAAGTCTTCTCAAGATCTGAGTCCACCCAGCCCTTGTTAGATTCTGAAGAACGGCCAGAAGATTTACAGCTGGTAGATAATGTAGATGGCAGTGATGGCATTCTGCCCAGGCAGCGGTATTTCAAGCAAAACTGCAGTCAACATGAAACCAGTCCAGATATTTCGCATTTTGAAAGGTCACAGCAAGTTTCCTCAGTCAATGAAGAAGATTTTGTTAGACTTAAACAGCAGCAGATTTCAGATCATATTTCACAACCCTATGGATCTGGGAAAATGAAAATGTTTCAGGAAGTTCCTGCAGTGGATGCTTTTGGTCCAGGCATTGAGGGACAAGTAGAGAGATTTGAAACAGTTGGGATGGAGGATGCAGTTGATGAAGGAATGCCTAAAAGTTACTTACCACAGACTGTGAGACGAGGTGGCTACATGCCTCAGTGAAAGACAGTTCCTGTTACATCTTCAGAAGTACCTGTAAAGTAAAGCTAAAAATACTTTATCTGTGATTTCAGATCTTCACTCGCTGAAGATGGTCATTTGCCCTTAAGGACAAGAATGTACTGTCCTGCCACATGGGCTTTTTCCATCCCAGTATATCTGGGATTCAATTTTAAGCACTACATAAACTGACTTCATCCTCTGAATAGCTGACTGACTTTGTGCTGTTTCAGGATGTTTGCACTGAAGAAAAACAAAGCTTATCTAAAATTTATAAAGTGAAACTTTTTGTTTTGCTGTCTAGAAAACAGAGGGTATTTAAATTAAAGCTAGTCATAAACAGCTATACTGATTTTAATGAGAATAGTCATTGAATATCAAATCTTAGGGAGAGAATTAACAAAAATTAGAGGAGCAAGGTCTTAGACTCTCTACTTTAGCTGACAACATAATTTAAAAAGAATCCAGATGATGCAGCTAATACGAGCCCAGCTTTTGTTGTCTGCCAGAAAAAATTCAGGTCATTTATAATCATACCAACAAGTAAAATATTAGTCCTCTTCCATTGGTAGTGACACTGCCAGTTGCTGGAGAAAAGGAATTCTGTTTTAACACAGCAAACTAAAAATATCAATTTTTGAATATTAGACAATCAATAATTAAGGAAGTTTTCAAACATTTGCTTTCTATTGTTATTGACAGCCTTTGAAGATACACATCACAAACTCAGCAGAGTGTCTGGATAAGAGCTAGGAATGAATATGACAAACTATCTCAAACATTCTATACCTGTATATAAACTTTATTGACCCTTCTTTTTAAGACATCAGAGAATTTGGTTGATTAAGCACTTTATACAATATATCTTCACCTTAAAATGTGTTTTGACTTAATACACTGTTTTTCAGTAGGCCAAGATTGAGTTTGTTTTTTTCCCTAGTAGGTATCTAAAGCAGACTAATAAGTTATAGGACTTGGGCGATACTCACCAAAACAAAACACCACCCCCAAAATGTACATATTGATCTTAGTAAGTATCACAGTTAGCAAATACCCTTATTGTAGAGGCACTTAATGAAGAGATAGTATTTAATGTCTGCCAGTCCTGAGGTAGGTGGAACTTAGTTCCACACGATGATTTAGGAATATTTTAAACCTCTTCCCATATGTTCTGTTCTTCAGGGGGAAAGTGATTGAGCCTCCAGAGTTTAGTGCTAAACTCACTTTCACATTCATGTTATCCTCTACCCACCACCTTTGACAAGGAGGCAGGGCTAAAACCAGGGGCTGAGTAAGAAGAAATAGATCATGTATTGACTACTGCTATCAAGTAAGTTTGTTTCTCTGCCATATTTAAGATACAGAAGCCAGGGCAACTGAAAATATTTGCAGAGGTTATTGAAGAATAAAAGGTTGAGGAAATTTAGTGCACATTTACAGATGAGATGTGAGTCTACTCATTACTCTCTCATCAGTATTGTTCACAGTGGATTTCCTGTTATGCTTTATCCTTTGTATTCTTGCCTAACACTTCACAGAGTTCTTTCACATATATGCTCTTTGTGAGACAGAGCAGATGCTATATTCTGATATATCCAGTTCTTCTTTAGGCAAAACCAACAAGAGATTGGTAGACTGTCAGAATTATGAGGAAAAGTAGGGACAGACCCCAAACTCACACTCTACAAGGTAATAGCACCACCACCATTTAAGTTGGCCATCAAAGGCTGGTCCCTATCAGGAAAGGATTGGTCTTGCTAAATGTCAACAAATTTATATCTACTACATTTTTTTTATTTCCTCAAAATAAGTAGTCATGTTGTTATAACCATGTTTAGCTCTGACCTTCCTCCTAACAAATAGCAGTGTTGTGAAGAACATTTTAGTGTAATGATTATACATAGCGGGAGGGAAGTTATAAAATGTGAACTCACGATCTAAAGGAATGAGAACAGTTATTTAAGAAAGGACATCATTATAAGTAGATTTGATGTTGAAACTTAACATACAACATGGTGCAGTGAGTGAATGCCCTCTAACCACAAAAGCACTTTAGGCATATTAAATGGATGTTTGGATACTGTGCAAAAATTCATTCAGGAAATATTTATATACGTCTTTGCCCCAAAAGAGAAAAGCAGTCATGAAACTTGATCTAAGTACAAAATTACTTTCATAAGGCATGTTGTAGAAGAATCTGTTTTGATACATGTGAATTATACTTTAGGTCGGCAGAGAAATTAGGTTAATTTATGTGAAAATTAGACTGTGTTTAAGATAGTGGGTTTATTACTCATTAAATATCTAGTATCCAAAAGTTTGATGCAGTTACCCTCTTGTAAGATTAAAATAATAATCAAGAATATGTTACATTTGTTGTTACTGTAATTTGATTATTCATTACTGGTGTCTTTGATATCTTACCCTCATCCTTCATAAAGGCACGATGCTAAATAACTCTTGGAAAACTATCAGATTTCAAACCTACTAAAACCTTACAGTTTAATCCTTTTTTTAACATGGATCATTCATCGCTGGGGAATATACCCAACACATGAGCAGAAACAGGGAAAAGGCAGAGTCATTCACGTGTGTTGTGTTCACGTGTGCTCTTCACCTAGTTGTTCAAGTTCAGCCTTTTTCTTTGATGAGAGATTTTTTTTTTAACATGTGAAGTCATCCAGTGACCCTAGTTTATTGTGAAAACATTTATTTATGAAAATTCACATTGGAAGTAGAACATCTAAAATAGCTCTATAAATATCAATCAAACAAGTTTTAAAAAGATGTCTTTTTTCTGCTCACATAGTTAAGTAGTTAAATAATCATGACATAAATTTAGAAGTAGAATAATTATATAGTAGCATTCCCTAAAATATTTCTGTTAACTGGCATGTATTGACTAACTATAAATCAAGTAGGAAAGCTCTTCCTCTATTCCATTATATTCCACATCAATCTCTTCCTCTGGTGTCAAGAACAAATTTCTGTACCTTACACTTCTGTTTGTTGAGATGGGTAAAATGTCAACATAATAAGCTACATAAAACTTAAAAGTTCAGTTGTTTAAAAATATTGGGATAACTTTGTTGTAGGTTGTGTTTGATTCTGTTGCCCTCTAAGATTACTTTAAAAAGTTTTTTGCACTTTTTTTGTAAACTAAAAGAATATGAAGCCATACAATGGCAATATATTAGGTTTAAGAAGTTTTAAACCAGCAAACTTAACAGCCTAGTTCTTTAGACTGGTCCTTGATAGCAGTTCCTTTCAGGCTATTTATAAGCAGAATTTAGATGCAAGTCAAAACTTTCCAAATCCAAATACTGATCTTTGGAGTTAATCTATTTTTTTTTCATTGTATATTCTACTTGTATGTGTATTCACATGATATTCTAATATACATTGCATTAAAAATGAAAAGGTGGCTCTGGATGAGCCCATTTGTTACATATTTGTTCCTAAATTTTTAAAGGCTTTTTGTAGTTAAAGCAGGTTAGTTTAACTTAATTACCCAGTTCTTTACACTTCATAGATCATGATGAAAGTGCATTTGAGGCCAATAGTGGTAGATGTTACAGACCTTTTATCCCTTAAACATAAGCTTTGACAATGATAACTACATATTTCAAATGCTATTACATGAATATCAAAATGTGACATGTCAGAAATAAAGGGATAATTTAAAGGTGGATATTTGACATTTCTTTAGTCTTAGTATATATATATATGTTGAATAGTATACTCTAAAAATAAGTGTGCAATTTGCTAGTACTGCAGTACAGTGGTTAGCATTAGGTATGTCTCCTCTTTATACCTGGCTATGTCCCATTTAATTATAAGTGCAATCCTTTCAAGTTCACTTGCTCTTTTACCTTGACCTACTCTAACTTCATATAGAAGGCTTGTCTAGAAAGAGTAGTGTGTATTTTTACTTTTGCAGAATGAATTGCATGTGCAAATCGTAACCACAGCTATTGTTTTTATGTTGACATAACTAAATGTTCTCTCATATATCAGCTCTAATCCTTTAAGTAAATGTAATAAATTCTTCCTCAAATGTTTTCTGGGTGTGGTCACTACCATTTGACGTCATTACACATAATATTTAAGGTAATTTTATCATTATTGGTCTTGAGGCTTTGTGTAAGCTTGGTGCTTTTGGAGAGTTCTGTGGCTTCTGAATTCCTCATTTAACATAATGGGTCAGGATTTAGAAGAAAATCAATACCCTACCTCAGCCTTAATAAATACAGAATAGACTTGGAGATG EMBV3_34838 CTCAGCCCCGGAAGCTTGGATAAACTTGGGTCAGAACCTTTGAGGTTTCTGAGGACTTCG Variant GeneID:540601|DNAH1:XM_002697065:565_cdna 337^409 1 EMBV3_23805 GeneID:540601 22 GENE DNAH1 NULL dynein, axonemal, heavy chain 1 EMBV3_21692 CTACTGTTGGTTTCTTCTGGATTTTCCTTTTGGGTTTTGTAAACAGAAGTTTAAGACCAC Gene GeneID:282658|ARPP19:NM_174705:18_cdna Constitutive 1 NULL GeneID:282658 10 GENE ARPP19 ARPP-16 ARPP-19 cAMP-regulated phosphoprotein, 19kDa EMBV3_31773 AGGCGGCCTCCTGCATGACTTCCTGCACAGCTCCAGCACTTCCAGCTGACATCCATCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23710 CTATACACAGAATAGTATTAGTATAATTTCATGGTGGATTACTGTACAGTTTACCTTACC Gene GeneID:100125833|RERGL:NM_001105472:2_cdna Constitutive 1 NULL GeneID:100125833 5 GENE RERGL MGC154954 RERG/RAS-like EMBV3_08901 GTTCATGGCTGGAACTGCTAACTGCAGAACATGAGAGCAGGAGGGGCTTTTTTGCACATG Gene GeneID:511988|TRUB2:NM_001110073:67_cdna UTR3_Alt 3 NULL GeneID:511988 11 GENE TRUB2 MGC140821 TruB pseudouridine (psi) synthase homolog 2 (E. coli) EMBV3_07730 CTTGAGGTGTGCCTGATTGCTATGAACTCTCCCCTTAGGACTGCTTTTACTGTGTCCCAC Gene BVT0102_272099 - 1 EMBV3_37249 GK000010.2:9974920-9993083 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019196 1 XLOC_009876 NonCoding TCONS_00019196 XLOC_009876 NonCoding NonCoding - 10:9980341-9980828 - TSS13086 487 2 TCONS_00019196_1 68 0.997946611909651 1 0 0 0 6.33402614811586e-06 0 0 2.2734805889957e-06 0 1.39140018347525e-05 1.62015150058265e-05 7.04054545164089e-07 7.9055193986253e-06 6.07219685111842e-06 8.41676990453747e-07 1.37987945994574e-06 5.01370621573512e-06 0.000249948176076743 0.00172946456449792 0.000150516071137855 0 0 6.23352847105496e-07 4.9793916156983e-05 5.08025668992202e-05 0.000163665955010042 0 0 0 9.39198316540561e-06 1.95214065416054e-05 1.2345428339463e-05 XR_236034.1 LOC101902035 PREDICTED: Bos taurus uncharacterized LOC101902035 (LOC101902035), 9e-42 174 74.74 0.560574948665298 XM_005262092.1 TIMM8A PREDICTED: Homo sapiens translocase of inner mitochondrial membrane 8 homolog A (yeast) (TIMM8A), transcript variant X1, mRNA. 3e-29 132 71.06 0.5564681724846 0 noncoding TTTTCATTTCTAATTTTATTGATTTGGTTTTTCTACTTTTGTTTCTTGATGAGTCTGGCTAATGATTTGTCAATTGTATTTATTCTTTCAAAGAACCAGCTTTTGGCTTTGTTGATTTTTGCTATGGTCTCTTTTGTTTCTTTTGCATTTATTTCTGCCCTAATTTTTAAGATTTCTTTCCTTCTACTAACGCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTGTAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTGAGGTATGCCTGTTTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGTCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCGTTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGTGTTTCTCCTGTAATTGAGATCTAA TCONS_00015913 TCONS_00015914 TCONS_00015915 . 5' 4245 TCONS_00015913 TCONS_00015914 TCONS_00015915 . 5' 4245 EMBV3_37799 TCCTGTAGATGAGAAACCATACAAGCAGTGGGATTCGATAAACAAGTGGATGTGTCATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33682 AGGGCTTCCCTGATGGCTCAGTGGTAAAGAATCTGCTTGCCAAAGAGGGAGACATAGGTT Gene GeneID:619125|LOC619125:XM_002694624:83_cdna Constitutive 3 NULL GeneID:619125 17 GENE LOC619125 NULL similar to SEC14p-like protein TAP3 EMBV3_23777 TTCCCAAGGCGGAGCTTCATATTCCGCGCCCTCTCTGCTGTGTTGCTGTTTTGGTTGTTT Gene BVT0101_013254 + 0 NULL GK000010.2:86802292-86883738 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26010 AGCATGCCCCTTGCTGTGGGGGTGGCTGTCATTCTAGTGGAGACAGAAAGTACTAACACT Gene GeneID:506627|DKK3:NM_001100306:86_cdna Constitutive 0 NULL GeneID:506627 15 GENE DKK3 NULL dickkopf homolog 3 (Xenopus laevis) EMBV3_33588 CAGGGCCACGTGCCAATGTTTGTCTAATCGCGCCTCTGGCCCACTACAAACGGTTAATAA Gene GeneID:100295088|LOC100295088:XM_002689208:109_cdna Constitutive 0 NULL GeneID:100295088 7 GENE LOC100295088 NULL hypothetical protein LOC100295088 EMBV3_41814 AGTGAAGGAAACCGGATCTCAGGGGCCACCTTCTCTGTAGGTTCTGGCTCTGTATATGCT Gene GeneID:534640|PSMB5:NM_001037612:209_cdna Constitutive 0 NULL GeneID:534640 10 GENE PSMB5 MGC134464 proteasome (prosome, macropain) subunit, beta type, 5 EMBV3_14934 TTCCCTTTGTGGGCTGGAGAGAGAAAGAGACCTCATGATTGGTAGGAAAGAGATTTGAGC Gene BVT0102_044306 + 0 NULL GK000027.2:26449796-26714073 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43564 CTCCTCTAATTTGTAGTAATGAAGAAGGGGTTCTGGAGCGAGTGTAATCAGCAGGGGCCC Gene GeneID:514423|SNX5:NM_001034464:49_cdna Constitutive 1 NULL GeneID:514423 13 GENE SNX5 MGC128439 sorting nexin 5 EMBV3_33697 ATTCTTATGAGGGCAGCCCACGTGAATTGCAGGAGTAGCCTCTGAGTGATCTCTCTACTC Gene BVT0102_136132 - 1 EMBV3_15675 GK000011.2:67158252-67187148 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032468 1 XLOC_018708 NonCoding TCONS_00032468 XLOC_018708 NonCoding NonCoding - 11:67161094-67161902 - TSS23467 808 3 TCONS_00032468_3 52 0.139851485148515 1 0 0 0 0.000297777754656639 1.02774098695884e-05 0 0 0 0 0 0 0 0 0 0 0.000965450595151246 0 0 0 0 0 0 0 0 0 0 0 2.90057239872016e-05 0 0 0 0 noncoding 0 0 0 0 -0.183686758655885 0.183456811026351 0.0304767489303032 0.529854879698193 GCTCAGATGCCCATCCTCTCGGGAAACATGGAGCAGAGGGCTCCCAAGCAGCCTGAGGCTCTGGAGAAGGGGAGGGCCAGGAGCTGCACGGCACAGGAGTGGATGGCTGGGCTCTGGGTTCAGGACAGGAGGATGCATATGCGCTGACATCATGTAAACTTCCACATTCCACTACTTCCTCTGCAGATAGCATCAGGTCACGTGCTGCCAGATAGCATCAGACGTGTGCTGCCGGGGAGCAGAGAGATCACTCAGAGGCTACTCCTGCAATTCACGTGGGCTGCCCTCATAAGAATTGCAGGAAAGCTTTCATCCTGCCGGGAAGGCTGGATAAAAGGAGGCCCCGGGGATGGAGATTCAGCTGTTGCTCAAGGCTGGCCTTTGGTCAGCCACAGAGAGAGCTGCTGACTGACTTCAGATGAGAAGTGAGTGCAGAATACCAACAGGGAGGCCAACCTCTCTTTCCTCTGCTGCCTGGAAACTGTTTTACGATCCTAGAATAACAGACTGGAAGATACCCTTGAACTTGTCTAATCTAACCTATTCACTTAATGGATAGTGAAACTGAAGCCCAGAGACAAGTAAATTGTCAGAGTTCACAGAGCAATGAGGAAAAGGTTTAAAGGGCTCCTCTGTTCCACCGTTCAGTGATGTTTGTGATTCTTAGCTTCTGTCCGAGGGTTCTGCCCCCAGACCAGGACCATGCTGTGAAACCCACTGAACGTCTGTCACTTCAGTGCTTCCGAAATATGGAGCTGGGCTTAGCTCTTGGTCACAACCAAGACCCACCTAATATGGCATTTTCCAC TCONS_00025229 TCONS_00025230 TCONS_00025231 TCONS_00025232 . 3' 631 TCONS_00025229 TCONS_00025230 TCONS_00025231 TCONS_00025232 . 3' 1438 EMBV3_23361 ACTTCCACGACGTTCAGGATTATGCAGACAATATCAAAGCTCAGCTCTTTGAAACATCCA Variant GeneID:617635|RAB24:NM_001034802:46_cdna 499^711 2 EMBV3_01015 GeneID:617635 7 GENE RAB24 MGC127026 RAB24, member RAS oncogene family EMBV3_17362 ACCCAGGTTTCCTGATTTCATGGCCCTAGGAAGGAACAAGCACATGGGTCTATCGTATTA Gene GeneID:789999|EIF3B:NM_001102356:356_cdna Constitutive 0 NULL GeneID:789999 25 GENE EIF3B MGC159978 eukaryotic translation initiation factor 3, subunit B EMBV3_05546 CAGGGACGGCGATAACAAGTCACTGGTTGAGTATGTTGCAGCTCCCTGGGTTGTACATTT Gene BVT0102_039188 + 0 NULL GK000003.2:87273176-87803443 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08797 GCTCGCCAACGTCAAGTACCAGCTTAGGAAAACGGGCGGGACCAAGTTCCTGAAAAACAT Gene GeneID:515677|TSHZ2:XM_002692360:225_cdna Constitutive 0 NULL GeneID:515677 13 GENE TSHZ2 NULL teashirt zinc finger homeobox 2 EMBV3_19321 AAACGGTCAGCTCTCAGTGAAGCCTTGCAGAGTGAATGCACGAGGCATAATGACCTGTAG Gene BVT0102_007382 - 1 EMBV3_05181 GK000007.2:15881850-15890257 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219224 1 XLOC_132543 NonCoding TCONS_00219224 XLOC_132543 NonCoding NonCoding - 7:15884659-15884894 - TSS163222 235 1 TCONS_00219224_1 77 1 0 0 0 0 0.000106010476463797 0 0 0 0 0 0 0 0 3.66291576922544e-05 0 2.08774203072149e-05 0 0 0 6.10292265377246e-05 0.000948657334584449 3.87539775637718e-05 0 0 0 0.000412760168840594 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0125428642599773 0.937502010447808 0.0243469236410693 0.616514577398475 GCACATGTCTACACCTACGTGTATCAGGGGTCGCACACGCCGGATACATCCCCTTCCCAGCCCCGAGGTTGGAGATGCTGCAGTAGAACCCATCCCTGGCCTCACCACTGAGTTCCAGGCGCCCTACAGGTCATTATGCCTCGTGCATTCACTCTGCAAGGCTTCACTGAGAGCTGACCGTTTACGGGCCTCAGTTCTAGGCGCTTGGGAATACAGTCGGGGGCAGCACACACCA TCONS_00215625 TCONS_00215626 TCONS_00215627 . 5' 62 TCONS_00215625 TCONS_00215626 TCONS_00215627 . 5' 62 EMBV3_42040 CCTAACTGCATGATTTCTGTTTTCTCTACCTCTAAAGCAAATCTGCAGTGTCCCAAAGGC Gene GeneID:317706|PGRMC1:NM_001075133:11_cdna Constitutive 2 NULL GeneID:317706 X GENE PGRMC1 NULL progesterone receptor membrane component 1 EMBV3_19796 GTTACACACCCATCCAAGCAGTTTCCCTCGTAAAACCAAAAAAGAGGGAAAAGTCACTCC Gene GeneID:359712|COL12A1:XM_002690028:11_cdna Constitutive 0 NULL GeneID:359712 9 GENE COL12A1 NULL collagen, type XII, alpha 1 EMBV3_38914 CAGAGGCGCGAAGGAAAAGAATCTAAAAGTGAAAGGACCAGTTCGGATGCCTACCAAGAC Gene GeneID:787404|LOC787404:XM_002697700:245_cdna Constitutive 0 NULL GeneID:787404 24 GENE LOC787404 NULL similar to ribosomal protein S20 EMBV3_27604 GCTCTGTCCCCGGAAGCGTGTTATGAGTGCAAAATCAACGGCTACTCTAAGAAAGACAAC Gene GeneID:540017|FBN2:XM_002688974:49_cdna UTR3_Alt 2 NULL GeneID:540017 7 GENE FBN2 NULL fibrillin 2 EMBV3_15313 CTGAATATTAGCCTGAAAGGCTCCCAGTACACAGGAAGCAGTTACTTCTTATTCTCCTCC Gene BVT0101_054045 + 0 NULL GK000001.2:89361646-90517078 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009313 1 XLOC_004869 NonCoding TCONS_00009313 XLOC_004869 NonCoding NonCoding - 1:90428410-90430135 - TSS6390 1725 3 TCONS_00009313_1 42 1 0 0 0 0 0 0 0 0 1.37153220003806e-05 2.28699850680901e-05 0 2.65412776198311e-06 4.14570336072092e-06 1.66335048581581e-06 5.99929883819727e-05 0 0.000382776731310646 0.000269486288998981 0.000305454581442141 0 0 0 1.29055169626536e-05 0.000234004420899474 0.000213809934178745 0 0 0 0.000245001294896881 2.25140973987085e-05 7.66779809809706e-05 0 noncoding 0 0 0 0 AGGGTGGTTTCTCGGTAACTTCCTCTTTGCAACCGATGTCATTTTTTGAACAGCAGCAGACTTTTATTTCAGTGAAGTATTAATCTGAAATGGCAGCTCGAGGGAAGCCATGCGTGTGTGAGCGTGTTCAGTATTTTTGGAAGTTCCTAATTTGCTGAAATAGGCATCACTTTGCAGGGGCAACCGAGAATAAATTTGGGTTGTGAAAATGGTGTGTTTCATGTAAAATTTGAGTTGTAATGGCTTTTAAAAAACGCTCCCGTTCTTAGCTTATCTAATGATATTCCCGAAAATAATGTGGTGATTACGAATGACTAAAGTGTTGGAATCAAGTTAAAAACTAGATTTTTCTGTGTCTGGAGTTTGCTTAAACCGGTGGACTGTGCGAGCACCAAGGTGAAGAGTTTTAGTGCCTATATGATTTATAGTTGACTGAGGGAAGTTGACTGTTGGCTTTCTGGTTTTCCAGGCAAGACCCTTCTGTTGATCTAAACAAGCTTGCTCATAAAATATGGTGGGTGAAATGTAGGTTATTTTTAGTCTGAATGGTTTAATTCCCCCTCCCCCATATAATTAGGTAATCATTTCCCTCCCCCCTTTTTTCCTAAGACTCCTTTATCTGGTCGGATAATATGAGGCCCTGGTGGTGGTTTCATTTACTTAAAAAAGTGATAAATATCCTGATTACACGCTGAAGATACAGTGAGTGACTTTTTGGTTTTCCCAGTGTGGTTTATTTTCATTTTTGTTAAATCAGACTCATGCTGCATTGGTGTATTTTAGTAATCTTGACTTCCTGGGACTGTATGTTCTCACTCTTAATAAGTTTATAGTCTGGTGAAATAGGGCAGCTTTGTCTCCATGAAAACAGTGTGTATGTTGGGTTGTATCATGGGAGTTCATGGCAAGCAAGCTTCGGAAATTATCATTGAGCGCCGTTCTAGAAATAGCGTTTACCTGTGGAGGAGGGGCAGCAGAAAATATGCCTGAGAGTGGTTAGGCTTGTGATTTGTGTTTATACTTTTTGCTCTTAAATCGAGGTTTTCCTGCTTCTTTGGAATATGTTTGTTTTTCACCCCAATTCTGCTGTCTTGCACCATGTGATATATGTAATCACAACCATTAAATCCATAAACGACTACTATTTTTTTTTTTTTTTTGCCATTTGAGTTGTTAGAATCAGACCTAGAGGGCAAAGCACTAAACCGAATGGGGTATGAAAGCAGTACGTACAAGGAAAAAGTTTTTCTTACTGTTAAGGAACTTAATTATTTGTTAATGCCATAAAAATTGTTGCAAGGGTCACCATTAGTTTTATAACAGGTTTTTTTATTCCCATGTGTACCAGGTTTGGTTGTTAGTATGGGGGACACCGGTGGTAAATGGGATGGCCCCTTGTGAAGGTTATATTTTTTCATTGGTTGTTTCAAAGAAGTGTTGACTATTTTAATAACTTTTTTGCACATGTTCAGAGATCTTTGTTAGGTCTGTTCTCAACATAAGATTTATCATAATTACCACGAGAACATGCCCAGGAGGAGAATAAGAAGTAACTGCTTCCTGTGTACTGGGAGCCTTTCAGGCTAATATTCAGAAAGGGCAGAATGACTATAAACGTAGGGGTTACTGATAAGAGATGAGACTAATGGACCTTTTGAATGACAACCTGTTGAACAAATATATCTGTTCATATATAGCAGTGAAATATAAGTACAACCTTGTCAA TCONS_00001506 . 3' 60 TCONS_00001506 . 3' 1784 EMBV3_27232 GCAGGCCCAACAATACAAGATTATCTGAATCGACCAAGGCCCACCTGGGAAGAAGTGAAG Gene GeneID:540188|LOC540188:XM_002699779:70_cdna Constitutive 0 NULL GeneID:540188 X GENE LOC540188 NULL hypothetical LOC540188 EMBV3_04610 TGGACCTTACACGTAGGAAGTAAACTCAAGTCTTTCATCAGTTTCGGGGGAGGGTTGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35503 ACGTTCATCACTGTTTTTGGCACTGGCTGCCGGGAAGGTCCAGCCTGCTGCATCCTGCTA Gene GeneID:613699|LOC613699:XM_002707801:131_cdna Constitutive 0 NULL GeneID:613699 11 GENE LOC613699 NULL similar to Interferon-induced transmembrane protein EMBV3_30229 ATCGGTGATGCGATCCTTCAGATCGGTGAATGTGTAAGATGTATGTAGCAGGACCAGTGG Gene BVV0102_192784 + 0 NULL GK000018.2:64022209-64049528 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087661 TCONS_00087659 TCONS_00087660 TCONS_00087662 1 XLOC_052563 Coding TCONS_00087659 XLOC_052563 Coding Coding LOC100301148 18:64047140-64065671 o TSS65067 4091 3 TCONS_00087659_1 110 0.131019310681985 2 0.779330814894765 0.00150600596930123 0.0016663238994472 0.0017983803940575 0.00103902307469893 0.00109458315455243 0.000534481855286933 0.0008609815726966 2.02763960362801e-19 0.00141669568786325 0.00040234376331866 8.44446094734523e-05 0.00011794871036432 6.4849732031797e-05 1.74920802321372e-42 0.000572753778412599 0.0034512974959029 0.00073198255737751 0.00161258256975019 0.00139385256134628 0.00205776568285017 0.000823736850458125 0.000600812458157821 0.00118753963272022 0.00125412265798924 2.5334647565652e-13 0.00169922660776118 0.0010801188442614 0.000288788287596219 0.000194463383232221 2.20757065387162e-09 XM_002695476.3 LOC100301148 PREDICTED: Bos taurus zinc finger protein 28 homolog-like (LOC100301148), mRNA. 0.0 6881 100.00 0.93229039354681 NM_175247.3 Zfp28 Mus musculus zinc finger protein 28 (Zfp28), mRNA. 0.0 1045 76.41 0.346858958689807 TCONS_00087659_1 sp|Q08AG5|ZN844_HUMAN ZN844_HUMAN Zinc finger protein 844; 3e-07 48.9 32.38 0.945454545454545 0 coding 0 0 0 0 0.110151382590082 0.510999367544751 0.0601354137488985 0.333271283622455 AGCAGTGTACAGAGGAAACCCAGGAGTTCCTTTCAAAGCAGAGTTCCTTTGCTGAAGTGGTGACAGACAGAACTTCAGAGACTAATGTAGGTCGTTCCTCGCTCAGAGAAAGCTGGGACGCTGAACGTCTGTTTGAAAGGGAGCTGGCAAGTCAGGAGACACGACTGGGGCAGGAGGCAGTCGCTCACCACAACACCCTCTCTGAAGAGAGAGTGTGTCCATATAACAGACCAGGTAGGTGGTTCCACCTGGACGTCTCAGAAGAGGGAGTCCACCGCCCTGACTCGGTTAAGAAAGCTTTGCCCCCAAACTCAGTGCTGATAAAACATGCGGGAATCTACACAGGGAAAAAACTCTTCAGATGTCACGAATGCAAGAAAACCTTCACCCAGAGCTCGTCCCTCACCGTCCACCAGAGGATCCACACGGGCGAGAAGCCCTACAAGTGTAAGGAGTGCGGCAAGGCCTTCAGCGACGGCTCTTCCTTCGCCCGCCACCAGCGGTGCCACACGGGCAAGAAGCCGTACGAGTGCCTGGACTGCGGGAAGGCCTTCATCCAGAATACATCGCTCGTCCGCCACTGGAGGTACTACCACACAGGGGAGAAGCCCTTCGACTGCCTGGACTGCGGGAAAGCCTTCAGCGACCACATCGGGCTGAACCAGCACCGGCGGATCCACACCGGGGAGAAGCCCTACAAGTGCGAGGCGTGCGGCAAGTCCTTCCGCTACGGCTCGTCGCTGACCGTGCACCAGCGCATCCACACCGGGGAGAAGCCCTACGCGTGCGAGGTGTGTCGCAAGGCCTTCAGCCACCACGCCTCCCTCACCCAGCACCAGCGCGTGCACTCGGGGGAGAAGCCCTTCCAGTGCAAGGAGTGCGGGAAGGCCTTCCGGCAGAACATCCACCTGGCCAGCCACCTGCGGATCCACACCGGGGAGAAGCCCTTCGAGTGCGCGGACTGCGGCAAGGCCTTCAGCATCAGCTCGCAGCTGGCCACGCACCAGCGGATCCACACCGGGGAGAAGCCCTACGCCTGCAAGGTGTGCAGCAAGGCCTTCACGCAGAAGGCCCACCTGGCCCAGCATCAGAAGACGCACACTGGGGAGAAGCCCTACGAGTGCAAGGAGTGCGGGAAGGCCTTCAGCCAGACCACGCACCTGGTGCAGCACCAGCGCGTGCACACAGGGGAGAAGCCCTACAAGTGCCTGCAGTGTGGGAAGGCCTTCGGCGACAACTCGTCCTGCACCCAGCACCAGAGGCTGCACACGGGCCAGCGGCCCTACGGCTGCGCAGAGTGCGGGAAGGCCTTCAAGACCAAGTCGTCCCTCATCTGCCACCGCAGGAGCCACACCGGCGAGAAGCCGTACGAGTGCGGCGCCTGCGGCAAGGCCTTCAGCCACCGGCAGTCCCTGAGCGTCCACCAGAGGATCCACTCCGGGAAGAAGCCCTACGAGTGCAAGGAGTGCCGGAAGGCCTTCATCCAGATCGGCCACCTCAACCAGCACAAGAGGGTGCACTCGGGGGAGCGGCCGCACGGCCCCGGGAGGAGCCGCAGAGCCTTCCGGCAGGGCTCGCACTTCGCACACGCGCGGACGCACGCGGGAGACGCGCCCGCGCACGCGGCGCCCGTGGCGCGCCCCGCGGACCTCTTGCCCGCGTTCCTCTGGAGCCCGCCCTCGCTGCCATCCCTGCCGTCCTGAGACGCCGTTCTGCAGGCCGCCGATGGCCGCGCTTCAAACCCCGTCTCCCTCTTCCTTGAGGACTGTCCCGTTCTTGTCCTGTTTCCTCTTCAGATTGCCAGTTAAACCGAACGCGGAATTTCTTTTACTGCTCACGTAAAAATCGGTGATGCGATCCTTCAGATAGGTGAATGTGTAAGATGTATGTAGCAGGACCAGTGGTCCATACTAAGGGATGAGTGGTGTTAGCTCTTTATAGAACATTCGTTTTGGACACGGAAAAGTTACCATTGGCAACTGACCAAAAATGATGCACAGAAAGAAGCTAAGGATTTTAGATCAGGGATGGGCCATTCAAGATAGTCAGTGAGGCTTTTCCGGTTTTGGTTTAAAACTCAATTCCATAATACTGAGTTAGTATTGGGGCTTTTCATTTATCTGCCTGTGTGAGGTGCTGTCACCTTGTTGGTAAATTACTTAACATTCAGCAAGACTTGATCATTTAAAGTCACCAGGGCTTATGAGTAAATTCCATTAAACTTAAGGAACCACTAACCTTCAGACAAATTGATCTGGACTGTGTGACTCACGGCCCAAGTTTCACTGACTGTGTTCAAACAGCCCATGGCCTAATTTTTAAAAATGATTTTAATGGAGAAACAAGTGAGAAGAATAATAGTTTATGACAACATGACAATTACATGAAATTTAAATTTCAGAGTCCATAAGTAAAGCCTGATTGGCTCACAGACATGGCTCACAGTATGGTTACATGCTGCCTGGGGCAGCTGTCAGGCCACGACAGCAGAGCTGAGAAGCTGCAGCAGAGATACCGTCATCCGCAAAACCTCAAGCATTTACTTACTAGCTTGCCAACTTGCAGTCCCCTGCAGAGAGAAACAAAATATACAAAAGGTTCTAATTATTTGTCTGAGAATAATACAACTCTCCCATCAAAAATAAGAAAAACTAAAGCAATTTTTGAATAGAGGTGAAAGGATATTACTAAAGCATCAAACAATAGGAAATACGAGGAAATAATGTCCACAAAAGGAGAAATAACGGTATTTTTCTAGATGAAGTACTACCGTTAAAATGTTTATAAATTGCCGTTCACAACAGGGTCCCAGTAGGATATGTTTGCTCTGACAGTTTTAGTGGAAAACACGGAAGGATGATTTGTCAAACATAGCAGGACATTTAAAAAATGTTTTGGTTTATAATCAGATTGGCTTCCTTGGGTGTAAAGAATCCACCTGCCAGTGCAGGAGATTCAGGTTCAAACCCTGAGTGGGAAAGATCCCCAGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCACTGACAGAGGAGCTTGGCTGCTACAGTCCACGGGGTCACAAAGAGTCGGACACAACTTAGCGACTAAACCACCACCACCAAACACAGAAAGGAGAAAGGCTTTACTGAGTAGGGGGCATTGAGCCCTGGAAGACATGAAGACAGTAAGCCAGCCCATACAAAGATTTAAATCAACTTTGGCATGGCAGAAGGTGCCAAAAAGATGTAATAGAAAACTGGCAGAAGATAACAGTCCATATGAATCAATGTGTCATTTACGAACAGAGTGCTGTGACACATACAAAGCAGGGAAGTAGGTGGTGCACGCCAACAGATGCGTCGTGCTCGAAGAACTCAAAGAAAGAACACGTGTTAGGTTCTTAAGCCCATTGGTCAGAAAGTTACAAACTTAGTACAAATCTTGACTCTCAGATGGGTTAAAATCTAACCTGGTTAATATGCTGTACCTGTATCAGTGTGGGAGACAGGAGGCTGGTCATCGTTACCCTTGTCAATGTGCCTGCTCTGGTTTGGGGTGGCAACATGGCGTGACCTGTCCGCTTTATAAACATGCATTCCTTTTGAAACAGTAACTCTAGATCTAGGAGTTTCATCCCACTGGAATAAATATATAAGTGTAAATAATGTTGATTGCAAAGTTTTAATCACAACACAAATTGATGACATTGTGATTATTCAATACAGTATTGTCCAGTTAGTATAAAGATGAAATTCTATGTTTGCTCCTATGGAGTATTGTTGTACACAATATATTAAATATGTGATTTGCAGAACCTTATGTGTAAAATGATCTTGTGGTCTTATAGAGTCAAAATATTTAATATATGTGTGTGTGTGCATGTGTGTCTGTATATGAGTTGGCTAAAAAGTTGATTCAGGTTTTCTGTGTTAAAACCCAAATTAAGTTTTTGACCAACCCAATATGTGTGTTTTTTCAATATATATATATTGAAGTCTGTTTTTGTCTTTAGCACACATTCGCTCTTTGTTGGCTCTCTGTCTTTCTTCATTTTTTATTGTTCTGTTGGACAGTACAACAAGCCAGTAAGATTTT TCONS_00087663 s 5' 0 TCONS_00087663 s 5' 0 EMBV3_31167 GCGTTCTGTGCTTTTTGCTCTCATCTGGAGGAATTCTGCCCTTACCTGCTCACCTGCCTT Gene GeneID:789855|LOC789855:XM_002696652:239_cdna Constitutive 0 NULL GeneID:789855 21 GENE LOC789855 NULL similar to mCG64442 EMBV3_35947 AACGTCCCCAAACACCAGTTCCCGCACCTCCTGGAAGAAAACAAGATCGCAGTCAGCTAA Gene GeneID:541170|SALL4:XM_002692504:628_cdna Constitutive 0 NULL GeneID:541170 13 GENE SALL4 NULL sal-like 4 (Drosophila) EMBV3_36728 AAGCAGAGATCCAAGTTACCCCCATGGTTGTCTCCTCTACTACACCTCTTTCAGTGGGTG Gene GeneID:533337|TMEM35:NM_001014940:20_cdna UTR3_Alt 1 NULL GeneID:533337 X GENE TMEM35 MGC139742 transmembrane protein 35 EMBV3_34433 GCAGGCCCACGGTAGCGCAGCCGCTCTGAGTGGATCTTCATGGAGGAACACGGAGTGACC Variant GeneID:509232|NRF1:NM_001098002:161_cdna 127^271 1 EMBV3_12053 GeneID:509232 4 GENE NRF1 NULL nuclear respiratory factor 1 EMBV3_21329 TGAGGATCCACAGCAAAGGACATTTTCAGGCGAGTTGAAGAATTTCTCAGCAAAGATATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00063 TTATGTCTCCTGCATTGACAGGGAGGCTCTTTACCACTCGTGTCGTCTGGGAAGCCCTAA Gene BVV0101_016683 + 0 NULL GK000027.2:39234116-39861721 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32197 TAGACCAAAAGGGCTCACTGAGTGCCTGGCAAGACGGACGTAAACAGATCTATACCAAGG Gene BVT0102_106798 + 0 NULL GK000007.2:55041419-55062186 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07344 CTGGCATAGGGAGGCTTTACTTGCTAAGAGTCCCAGTCCTTAAGATGAAGAGTGCTTTAC Gene GeneID:538951|NANOG:NM_001025344:52_cdna Constitutive 0 NULL GeneID:538951 5 GENE NANOG NULL Nanog homeobox EMBV3_07223 GGAGAAAGACCCTACTGGGAGATGACCAACCAAGATGTGATTAAAGCCGTAGAGGAAGGC Gene GeneID:100337226|LOC100337226:XM_002688310:150_cdna Constitutive 0 NULL GeneID:100337226 6 GENE LOC100337226 NULL ephrin receptor EphA5-like EMBV3_19419 CAGAAAGAAACGTCTGGACTCTCCTGCCCAGGGCTTTGTATCTTTGCTGAAGTCAGTGAT Variant GeneID:538091|SENP1:XM_002687313:110_cdna 383^438 1 EMBV3_19479 GeneID:538091 5 GENE SENP1 NULL SUMO1/sentrin specific peptidase 1 EMBV3_25520 TCGTGGATGGGGGACCAGAGCCTCTTTGCGATTTTGCACTTGCTCATGTCTTCCAAGATT Gene GeneID:509471|UBE2L6:NM_001098917:13_cdna Constitutive 0 NULL GeneID:509471 15 GENE UBE2L6 MGC152289 UbcM8 ubiquitin-conjugating enzyme E2L 6 EMBV3_10682 TTCCTGAGAACTGACTCTTCTGGAAGCTGCACAAAGTATCGAGGACAGTAGCACCTGCAG Gene BVT0102_289792 + 1 EMBV3_34476 GK000012.2:12495986-12741068 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034531 TCONS_00034534 TCONS_00034535 TCONS_00034540 1 XLOC_020703 Coding TCONS_00034534 XLOC_020703 Coding Coding AKAP11 12:12447897-12499718 j TSS25496 9845 1 TCONS_00034534_7 1905 12 0.810247008876882 0.00396709217315924 1.08981252501003e-09 0.00207982112478424 0.00186010356998861 0.00364124805267517 0.000891041897584782 0.00245590462129744 0.00175476868000611 0.00501826919094544 3.90125054977126e-08 3.84049770520646e-23 1.4016391923635e-08 6.1814587069903e-05 0.000315930835296489 0.00148687559740171 2.80780653806153e-06 2.6267655033105e-21 0.00114102747054131 5.47236058659325e-07 0.00259628907280981 0.000713348705622641 5.90642074183337e-06 0.000747027042352424 0.000642385355488193 0 0.000397920242441072 0.000290670378195951 3.20714669263141e-11 8.03737227322143e-09 1.75772540361263e-13 XM_612396.6 AKAP11 PREDICTED: Bos taurus A kinase (PRKA) anchor protein 11 (AKAP11), 0.0 1.737e+04 100.00 0.978161503301168 NM_016248.3 AKAP11 Homo sapiens A kinase (PRKA) anchor protein 11 (AKAP11), mRNA. 0.0 7176 82.74 0.707059421025901 TCONS_00034534_7 sp|Q9UKA4|AKA11_HUMAN AKA11_HUMAN A-kinase anchor protein 11; 0.0 2899 78.74 0.999475065616798 1 coding 0 0 1 0 -0.0229388286682831 0.856847209722058 0.0233137374884425 0.715425575867743 GGGGGGAGGGCTGGGGGCCGCTGCGGGAGGGGGGCGCCCGCCTCCTCGGCCGCTCCCGCCGCTGGTCGTTGCGGGCGGGTGTCATGCTTGTGAGCTGCGGAGGCTGCGGCCCCCCAGGTCTTTAGTGGATTAACTCTTCATTGATTACATACAACAGCAGAATAGTCATGGCGACCTTCCAGTCTTTCAGGAACAATCACATGAAAACTAGAGCATCTGTCAGAAAAAGCTTCAATGAAGATGTGTTCCAGTCTGTGAAGTCTTTATTGCAGAGCGAGAAGGAACTATGCAGTGTATCAGCCGAGGACTGTTTGAAGCAGGATGAACGTGCCAATTTGACTGAGGTCACATTTCTAGGTTTTAATGAAGAAACAGATGCTGCTCATATACAGGATTTGGCTGCAGTTTCTTTGGAACTCCCAGATCTTCTGAACTCACTGCACTTCTGCAGTCTAAATGAAAATGAAATTATTTGTATGAAGGATATAAATAAATCATCAGATATAAACAGTGATCCTCTAAACCAGAGTCAACATCCTGGAATGCTTTGTGTCATGAGAGTGTCACCTACATTACCAAGACTTAAAATTGATTTTATTTTTAGTCTCCTAAGTAAATACGCTACTGGCATAAGGTACACCGTGGACACATATTTGCATCACAAGCACCAACTTGAGGCCACCAGTGAGGACGACGATGATACTAACCAGTCTGTATCTTCCATCGAAGATGACTTTGTCACTGCTTTTGAGCACTTAGAGGAGGAAGAGACTTCAAAGCCATATAATGATGGATTAAACATAATTGCACTAAGGAGCCAGTGTGATGCTACTTCACAGACTATTTCTGGTCACCATTTGGATACCCATGATTTCAGGGTTCTGGTTGGCTCTGAGCAGCAGAAGTCATTGGCTAAACCTTCAGCTTCTTTAATAAACATTCTGGGACATAAAAAACTGCCTCCAGTGAGAACTTCAGTCACGACATCAGTCTCTGAACCATGGGTCCAAAGGAGTTTCTATAGTTCCTTTGCTGCTTCAGAGAAAGGTAGTGATGCCCAGAAACCATTGTTCTCGTCTTCTCCTGCCTACTCGTCTGAATCAGAGTGCTCAAGTCCAAGTCCTGTTATCTTCTTGGATGAAGAAGGTTATCAAAAAAGTTTGAAAGCAAAACTTGAGTTACCTAAAATTCCTGTGATGAAAGATGATATTGAGGATTCAGACTCAGAAGTGAGTGAGTTTTTTGATAGTTTTGATCAGTTTGATGAACTAGAACAAACGTTAGAGACTGCTTGTCCGTTTCTGAAAGATCTTGCTGTAGGGAAGCCATCGCAAAAGAAAGGGCACAAACATGAAAAATTGTGCTCTGTAACCACTACTATGAATCCTCAAAAATTCAAGTTTGATCGGCCAGCTCTCCCAGCTAACGTTAGGAAGCCAACACCTCGTAAACCAGAATCCCCTTATAGTAACCTGTGTGATGCCCCAGATTCTCCCCGCCCCGTGAAGGCCTCAGGGGAAGACAGTGGTTTGTTTAGTCCTATTCGATCCTCTGCTTTCAGTCCTCTTGGAGGCTGTACTCCAGCTGAATGCTTTTGCCAAACAGATATTGGTGAAGATAGGGGTCATGAAAATCCTGATTCTCTTTATTATACCTTTGAAGATTATGCAAATAGCCTTTCCTATGAAGTTCTGGGTTCAGTTCTTCATAGCCAACATACTAATGCAACATCCAACACTAATAATATTAAAAAGGGAGAAAATAAAATGGTAGCTCTTCAGCATGGAAGCCTTGATCAAAAAAGTAAATCTAAAAATAAACCCATAATGATTGATAGCATTCAGAAGTTTGCAGCAGATCTCGTGGAAAAAAGTTTTGGCAGTGCATTTAAAGACTTACAGAAAGGGGTCTCTTCATGTACCAATGCCTTATGCCAGTTAGCCATCAAATTGACGTCATCCATTTTTCAAATGGCATTTAACGAACTGAGAAGGCAGTGTGCTTTTTCACTGAAAGAACGAGCCATTAGTGGCCTGGCTAGTTTTTTGGTGAGTGAGGCATTCTCAGATGCTTTACAAGATCTACAGTATGTAAAGAAACAGATCTTCACTAACACCGTCACTAGATTTGCTGCAGATCTTGCTGAAGAGCTTGTTTTTGAAGGCATCATGGAAGTGTGTCAGTTCTCATATCCTCCAACACCTGCATCTCTGCAGGGTCGGTCATTTCACTGTGAAGACAGAGTGGTGAAGTCCTATGCAAGAGATCTGTCTGAATCTGTAATACAGGAAGCATTCATTGAGCTGTCTCAAGTTGATGTTACCTTTACCACAAAGGCAGCAGTTAGTGTTTCCCCAGAAAACATCAAGTTTGTGAGCACAGAAGATGTAGTGCCAGCAACACAGACTTCTGTGTGTTCCCCTACTTCTAACAGTCAAACAGTTACGGTGACAAAACCAGTGCAGGAGTATAAAAAGGAATACACGGTGCAGCAGGCCTTGCTCTGTACTTCAGGAATTGTTACTTCAATACCAGTGCCCTTGGCAGGGAGTGCCCTTCACCCATACCGTATTTCTTCTAATACGTATCAGACAAAGTCTCATCCATCATGTGATGATAGTCATTTGAACGGTGGTCCTACCCCAGCAAGTGTTGCCACAAAAAACAAAGAAGAGGAGCTAGCTTGTCTCAGGAATATTTGTTTACCTTCAGACCACAACCCCGGTAGCCAGAATGAGGTGAAACCAACTAGTGATGTTGTTGAAACAAAAAGCTCTTCAAAGTTAACAAATGATCCTGTCATTATTGGCGATTTTTCTGCCGCAATGGTGCATACGATAGTAAATGAAACTATAGATTCAGTGACATCTTCCAAAGTTGCAAAAACAGAAGAACACACAGATTGTTTAACTCAAACAGGAAAGGGAAAAACCCCTTCTTTCTACTGGGATCAAGCAACAGTGCCACAGAGTGAGGCTAGCAAGAAGGACATGTTCGCCGATCGGTTATCTAAATCTATTATCAAACATTCCATAGATGAAAGCAAGTCAGTGATCGTAAATGTAGATAAAAATGTCCTCCCCAAGAAAGACTTGCCTGTTCCTGGAGATGAGTCACAGTTGACCTTGGAAGAGTTCCCCAAGTTTCTTGAAGCTCAAGATCATTTAACTCACTGTTCACTTTCAGAAGTAAAGGATTGTGTTCCAGAAGGTAAAGGTTCTGTGGCTCCTGGATTTTCTTTGGAGACACTACCACCTTGTCTAGCAGCGGCAGGCCAGAAAGCTGATCTGAAGGAAATTGCTAAGGACAAATCTGTGAAAAAGCAGAATTTGCATAATTCAGCCCTCGAGCCCTTGGCTTTTGGGCAGGAAAACTCGTTTCCCCATTCACATGCTTTCTCATCCACAGTGCTCACCTGTGTAGATGGTTTGCACGTGGAAGATAAACAGAAAATGAGAGATGGGAATGTAATACCTGACACCCCTCCATCAACTCCTCTGGTTCCATCCCAGGCTCCTTCTGATTGGGATATCAAGAAGTTAACCAAAAAGCTTAAGGGGGAGTTAGCAAAAGAGTTTGCACCGGCCACACCACCATCCACACCTCACAACTCGTCTGTAAGCAGTTTGTCTGAAAATGAACAAAATGCAATAGAAAAAGAAGAGTTCATGTTGAAGCTCATGCGGTCTCTCTCAGAAGAAGTTGAAAGTAGTGACGGCGAAGAGCAGCAAGAGGTGGACGTGAAGTTGGAGCCAGCAGGGAAAAAAGTTCAGTTTGCAGACGCGTTAGCGACACACATCGTTTCTCTTGCAACAGAAATGGCAGCTTCCCATTTGGATAATAAAGTGATTCAAGAAGCCAGGGTGAAAAGCCCTTGCTTAAATGTGCAGAGTCAAAGAAGCCTATCACCTGCTTTTTTTAATTGCTCAGATGAAAGTTTACAGGCATTATGCAGTTTTGCAGGTGATATGGCAGCAGAAGTCATTACGGAAGCTGAAAAAATAGCAAAAGTTAGGAGCTGTATGTTTTTCAGGAGGAAGAGGAACAGTTGTGTTGATGGTGACCAAGATCATAGATCCGAAGAGAAGTTGGATGTAGAGGCTGTAGCACACCCGGGAGGAGTAGATCCGTTTGTTCTTCCTTTACCACCAAGTTCTTGTCTGTCAGGTCTAACGTACAAGTATCCCAGCTGTGAAAGTGTGACAGATGAGTATGCAGGTCACATTATCCAAATACTAAAACAGGAAGGTGGCAACAGTGAGTTAATAATGGACCAGTACGCCAACAGACTTGCCTATCGGTCTGTTAAGTCAGGATTGCAAGAAGCAGCTAAAACAGCCAAAGTGAAGTGCAGCTCCAAAATATTCCCTGTGCAGAGCTCACAGGTGAAAACCAACGATGAACTGTTACTGTTTTTAAATAAAGAACACCAGCAAGAAGCAGATACAAAAAGACAAAGCAGAAGTGCTGGAAGTTACCTTCATAAAAACCAGACTTGTGAGTGGACACGGGACACGTGCAGAAACGAGTGCTCGGAACTACGTAGTTTTTCAACCTGTCTTGCTCACAGCATCACAAGAGATGTTAAAAAAGAGCTGATGGCATCGACAGGTGGCTTGCCAAAATCCTTAACAGATTCTTGCCTTTATGAAAAAAACGTATGTGACAAAGATACTGAGACTCATGTCGGGCCAGAGTTTCCCAAGTCTCTTCAGCCTTCTTCACAGAATCACAGATTTTCTCAGAGTACAGGCAGCTTGAGTGGGTGTGGCTATGGAGAGACTGTCGTTCAAGCTATAGAGCAGTATGCTAACAAAGTTGTGGGCGACACTTTAGAGCTGGGTTTAGGATCTGCCACCTTCCACGTGTCTGAAGCCACAAAAGCAGTTGATAGGATTACTTACGCAGAAAAGCTGTCACCTCTGGTGGGTCAGGCTTGCCGATCCTGTGACCGTAAAGAGCTCCATGACTGCACTGGAAATTCGTCTCCTCGCTTTCCCAGACCGGATTCGCTTGCTGGTAGTAAGCCAGTTTCTCATTCACAGCTTAGCAGCTTCTATCAGAAATCTAGGATTTTTCATCTCGATGTTCCTCAAATTCACGTTGATCTCGATAAGAAGACAGTGCTTGCTGAGAAGATAGTTGCTGAAGCAATTGAAAAGGCAGAGAGAGAGCTGAGCAGTACCAGCCAGGCAGCCGACAGTGGGATCGGACAGGAAGGTGTCAGCTTTGCCGAGAGCCTCAGCACAGAGATACTGGCGTCAGCAGTGGTCAGTGCTGGACAGGCCATCAGCAGTCCAAAAGAAACAGAAGAGATTCAGTCAGCTGAGTCTCTTGGTAGCCAGCAGATGCATCTCAGTATTGGTGAGGACAGTACTGGGAGCTGGTCCAACTTAAGTTTTGAAGATGAACACCAGGATGAAAGCAGTAGTTTTCACCATCTAAGTGAAAGTAATGGTAACAGCAGTAGCTGGAGCAGTCTTGGTTTAGAAGGAGATTTGTATGAGGACAATTTATCCTTTCCAACATCAGACAGTGATGGGCCAGATAATGATGAAGAGGAGCATCAGACTGATGTAGAAGGTTTGGAGCAAGATGGAAAGACTCTGCTAATTACAAATATTGACATGGAGCCATGCACAGTAGACCCCCAGCTAAGGATTATTCTTCAGTGGCTCGTTGCTTCTGAGGCAGAAGTTGCAGAACTTTATTTTCATGACTCTACAAAGAAGGAGTTTATGCAACTTACAAAACGGCTACAGGAAAAAGGGTGGAAGGTGGGAGACCTCCTGCAGGCTGTGCTTAAATACTATGAGGTGGTGGAGAAGACATCCAGTGAGGAGAGATGCAAGTCCCTGTTTGATTGGCTCTTGGAAAATGCATAGAACAAACTCCAAACCAGTAAATTTTATTATTTGTTTTGGGAGAGGAAGAAAAGACACATAGGGTAAAATTTGAGTAGTGAATATTAACATTTAAAGTGAATTGGGAGGAAAGTAAATAGCTATTAAGTGTGTTGTGTCATCATATGGTGTATATAGTTCATACTTTCGTAATCTGTCAGATATTATCTTCATTTATTCTTCTGTACACATGTGCAGTGTGTTAAGTAAGACCTTAAGAACATGTATTTGAAGGAAGGTCTGACTGTGAGGCTTTCAGGAACATTGACTGATGACAGCGTTCTTTTCGCATCCAAATAGTGCTGCTAGAAATTGCACTGAGGTGGCTGAAGGTGGGTTCCAGGGATAAAGAGTTATAATTTTGCTCCTTTACAAGCAAATGGTTTCCTGTTAATAACAAATCTGACATCAAAAAAAACAGCATTGAGGCTAATTTATTTTTCTGACATCTTTTTCTATTTTTAAGGGTCAGTTTTATTTTCATGGTTCAGCTATTGGTATTTTTTTGAATCCCCCAAGTTATTTAATTTCTTATAAACTGTAGTTTAGGTTTCTATAAATACTATAAATGATAGTTTCCCCAGCCTTTCATTAAATGATCTTATTTGCTAATGTTTCCAGTTGTTCTGGCATGAAAGTGAGTGAGTGAGTGTGTGTGTGTGTGTGTATTTGTGTGTATGTAAAGGAGAACTTAAACCTTGCTAGTGGTGGGTACCCTCTTTTATTTTACTCTTTTCTGGTCACAAACCCGCTGTTAACATTAAAAAGGTGCTTTAAAATAAAATGTCTATAAAGATTGTGCAGTAAGAATTTTTCTTTTTTGACTATTTTGAGTCCCCACCTTATTCTTTAAATGAAAATAAAGGTGCAAAACATATTGAAATTTTAAAACTTAATGTTCATTTGGAAATGCATTTAGAGAAGCCCAATAATTGTTTTCTCTGTTGGGATTTTGAAAACCTTTAGCAAGGATTTTTAAATTAAAACTCCACTTTAGCAGGGATAAGCTTTTTCTAGGAAAAACGGGACCTTCCCACCAACCCCTTCCCCAGTAAAATGTATCTGTACTGTTTTGTAAAGTCCTCTGATACAGTCTTTCTGGGCTCTGCATTTTGTTCCACTCGTCTTTAGTAACTGCGAGTTGACTTGAATAGAGGACCAGGATTGTGTTTTGTATGAGGGTATGTGCATGTGAATTTTTGATTCTTCCATTAGCAGATTTTTAATTGAGAGGAAATCATTTTTGTTGAAGGCTTTTGGTTTTGCTCTCACTTTTTCTTTTTTTCCTGAGAACTGACTCTTCTGGAAGCTGCACAAAGTATCGAGGACAGTAGCACCTGCAGGGGACAAGGAACAGGGCACTTGCATTGATTTGAATTACAGTTATGGCAGGAAATCATTGCTTCTTAAGAAAAATGCCAAAATCTATTTAAATGTTTTGAGGTTACACTTACAGAAGCTTCTATTTTTCTCAATTTAAGATGAAGAAATAGAGCAGGCCTTAAAAATAAATTTTGCTAAAGTTTCTTCGGGCATTTTTTAAGGTTGGAGAAATGTAGGAAATGTATGTAAGCAGAATTGATTCTGTCTTTAGCTTCTTAGAATTTGATCTGCAGCAGCACTGGACTAGGTTCTTAATTGTTAGGAAGCAGGTTGTTATAACATAGATTAATTGATTATTAAGCTTAGGTTGAATTTTTACAAGTGTATAGCTATCAAATTGTGTTTGGTATTTTCACTGTATGTACGGGTGTTATTAACAGCAAAACTGAGTTCTGAATTTCTTTTAAGCTAAAGTGACAATATGTTAGTTCTGTAAAACTCTCTACTTGAAAACGTTGATTTCCTGTATGGTAAGGTTTTCCTCCTGTCTTTGTTTTTGTTCGTTTTCTGGAGCTGTGCTGGATTCCGAGTTCCCTGTTCAGCCACTGTGGCCCAACAGACCAGTCCTTGGACCCTGGTGTGTATAGTACTGATGACAGTGGAGCTCCACACATAGCGGTTCAGTGCAGGGATGTAGAGAAAAACGTTAAACGTTGGCAAACGTGAAAAGAAGCGGGAGTTAAGCTTCCTTATATAGAGAGAGAACATTGGAGTTTAGAACAGTATCTTTTAATCAAGAACAGTCTAAACTTACTTTGTTTAAAGGCACTTTGTGATTTTTCCAAAGATGTAGATCTATTTGGTTGCTTAGCCTTCAGAACAGATCTGTTTGTCGAGGACGACTCTTATTTTGTTAAAAATCTATTTGATGTAATTTTATTATGATACTGTAATATTGCCATTCTGCATACTTTGGCCCTTATGAATATCATGTCTTACAGAACTGTTAAAGTTGTGATGTGCTTTGGGTTGAATTTTCTGTTTTATCAGTTTCAGAACCATTGGAGAACTGTGAAAAAAAAGTGAAGGAAGCCTTGGATGGGGTTTTTAGAACATTGTTTCAGATGGAACTTCTTTTTCCAAGCCAAGTTTAAAATTCCATTTATATTTGGGGTATTAACTCATTTTGATTTTGATTTATTTCCTGATTTTCACAAAAGGAATGATTCATTTATAAATCACAGAAGAACATTACAGTATCTCTGGGATGGTTTAACACAGTTTAATGGTTTAATGGAGTTTTAAAATCTTTGAGAACATTTACTCAGTGAATATATGTGATAACATCTTCATAGTTTGACAACCATTCCATTTACCCTTTTAGATATTTGATAGGAATTAATTCAACTCATAATACTTCCATTTTGCTTAAATAAAGGTTTTATTTTGCTGGTAGGAGAAGTTAGTTATTAAATGCACCAGGTATAAAGTAAAAGATGGTTTACCCACGTGGTTTTGATATCACGCACATTCCCCAGATGCAGTGTTTAACCTTGACTCATCACCAGGGTCTAGACTCAGATTAGTAAATATTCCTCTCTCACAATTAAAATGATCAATTTCCCATCAGTCTGTTGCTTTAAATTTTATTTCTTCAAGAGAAACTTTCCACAGAATTAAGAAAAATAATAATGCATCCATATTCAGGGTGTAGGGAAAATTCTTTCCATTTCAAGCTCTGTCCACCCGTCACCAGCACAAGAGAAGTAGAGCTTCCCTGGGAATTACGAAGCTGTGCTCAAGTGAAATGCTTTTTTCCTCACTCTCGTTTGAGGCCCTGCATACATTGACTAACTCACCGTATTCCTGCTCTGGAGATGCAGACGCAGTGTTGGTCACACTTGTCACTTTATATATTTATTTTTTTTCTACCATCCATGTACATTCCTTTCACAGGGGTAGAATCATAGGTCTAGAAGTTCATTGTCTTGTTTTTTGTTGTAATGTTTGAACACTATTTAATATCAGGTTTTAATATTGCTGGATTTGCTACCTTTTGTTACTTGTGCAGTGTTAATAGTAATAATTCACATTCTTGTTTAATATACCAGCTATAGAGCAAAAGCAGCTTTGAATAATTATAGCTGTTTATTTGACTGTGCTGAATTATTCCGTTAAGATCTTGTATAACAGTAACTTTTTTCTTTTGCTTTTTCAGTAATTTAATATGTTCATTTACCAAAATATGAACTTCAGGATGCACTAAAATTTTGTTTTTGCAGTGGCTCAAAAATAAACATTTCAGAAATTACTTTTGTAATAATTTGCGATCAATTGTTCTTTTATTTTTTCCAATTGTTTAAGTCTGTGATGTTTCTCTCCCAATTAAGAATTTCCCAATAAACTTAAGAGATGCCTGACTTTGGTTTTCAATCTGTAGTATCTTGTTAACACACTCAATACTGGACTAAAACAAAAGCATAGAAGGCACATCAAACAGCCTCTACGTTTCTAACATTATTTTAAAGAAGAACGGAAGCTAGAGTATTTGTAATTGGACACTGAATCCTAAGTTTTTATTTGAGTGCCTCTGAATGCTGACAGGATGACTTGACAGGC EMBV3_03477 CCATGTCTCCCTTCTATCCTGTGGTGTCTGGGGTGGTCCTACTCTAGGCTTCCTTTTCAA Gene GeneID:523694|SEPW1:NM_001163225:274_cdna Constitutive 2 NULL GeneID:523694 18 GENE SEPW1 MGC128106 selenoprotein W, 1 EMBV3_17200 ACCCTTTGCGCTATACAGTGCTCATGGATTATGGGATGTGTTTGGGACTAGTGGCCGCTG Gene GeneID:515038|LOC515038:XM_002685923:52_cdna Constitutive 0 NULL GeneID:515038 3 GENE LOC515038 NULL similar to putative olfactory receptor 10K1 EMBV3_16038 GATGCTGCAAACAAATAGCACTGGTGTGGGCTCGCAATACCTCAACCACCCTGGGTCTGT Gene BVT0102_310694 + 0 NULL GK000004.2:29597809-30124657 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111497 TCONS_00064619 2 XLOC_067397 XLOC_039343 NonCoding TCONS_00111497 XLOC_067397 NonCoding NonCoding - 2:108911804-108913031 - TSS83118 1227 1 TCONS_00111497_1 136 0.99918500407498 1 0 2.24543981333724e-05 3.42818734705977e-05 1.81095210390417e-05 1.0715761058514e-05 8.66710018065204e-06 1.29932719816372e-05 2.63442235317313e-05 1.34917526043401e-05 2.26542566678421e-05 3.46215974253708e-05 2.52456650377324e-05 1.70998848324587e-05 2.03315692433526e-05 3.82402640152374e-05 0.000124348635001901 0.000665174896514338 0.00114266058801457 0.000724569188951741 1.0981066488528e-05 1.73143430673122e-05 3.79363075871176e-06 0.000298806521968613 0.000344579344622897 0.000334145862505071 1.09169141566602e-05 8.06618934990682e-06 3.45687692838862e-05 0.000270746303838213 0.000100222817427683 9.72148945489545e-05 XR_231044.1 LOC100848024 PREDICTED: Bos taurus uncharacterized LOC100848024 (LOC100848024), 2e-41 174 100.00 0.0774246128769356 0 noncoding 1 1 1 1 -0.0846448040104425 0.665279514273791 0.00242228869859032 0.963275449168336 ACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCCGCCCTGACTCAAAGGGCACGGTGGAGGACGCTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTTGCGCTGTGGGGAGGGAAGGAGGGATGCTGCAAACAAATAACACTGGCGTGGGCTCGCAATGCCTCATCCACCCTGGGTCTGCCCCTGCTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCTAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCGAGCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCTGGGGCTGCGATTGCCCCCTTCCGGCTCTGGCTGCCTGTCACCGGAGGGGGAAGGTCTGCAGCCGGCTATCTCTGTTCAGTCCTTTGTTCCGTGCGCGGGCCTGGCGGTCTTAGGTTAGGGCTGGCTTTTCTCGTGGTAGGTATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCGCTCAGATAGCGCTCAGGGTATTCAGGCCAGATTCTTACTCTCAGCGATGCAGCCCACGCCGCGCCTCCCTGCCCAGCCCCGGTTTGCTAATGGCGGATGCAGGCGTCTGCGCTGCTTCTCTGCTGGGGGAGTTACCGTAGGGCTCACAATCTGCGAGTTTTAAATTGTTTATTTATTTTTCCCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTCGGCACAGATTCGGCAGTGAGAAGGTTTCCTGATGTTTGGAAACTTCTCTCTTTTTAAGATTCCCTTCCCGGGACGGAACTCCGTCCCTCCCTCTTTTGTCTCTTTTTTTTTGTTTTTAATATTTTTTCCTACCTCCTTTCGAAGAGTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCCGGCATTCAGAAGTTGTTTTGTGGAATTTACTCGACGTTTAAATGCT TCONS_00103383 . 3' 624921 TCONS_00103383 . 3' 626147 EMBV3_07622 TCCTTCTCCAATGCAGGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTTGTGTCCGACTC Gene GeneID:786060|LOC786060:XR_083687:142_cdna Constitutive 0 NULL GeneID:786060 5 PSEUDO LOC786060 NULL similar to BoWC1.1 EMBV3_09393 CACAGATGACTATGCCAAAAATCAACAGCACCAGAAAGACCAAGAAGAGGCCATCCCAGC Gene GeneID:100297732|LOC100297732:XM_002686435:421_cdna Constitutive 0 NULL GeneID:100297732 3 GENE LOC100297732 NULL similar to phosphatidylinositol glycan anchor biosynthesis, class P EMBV3_14719 CGTGCGGTGTCTTCTCAGCCTGTTAGAGGAGGCTGTGTTATTCAGGTATGAAAACGTAGC Gene BVT0102_091854 - 0 NULL GK000023.2:8554697-8591961 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133920 TCONS_00133919 TCONS_00133921 TCONS_00133922 1 XLOC_081259 Coding TCONS_00133922 XLOC_081259 Coding Coding C23H6orf106 23:8580566-8689002 j TSS99936 6767 1 TCONS_00133922_2 291 0.0400472883109206 5 0.937640060865957 0.00540130326824582 0.00174781493803859 0.00315548517406333 0.00127383071931172 0.0033224964302702 0.00103857325829129 0.000236534295429564 8.55882979081365e-07 0.00559702478820237 0.000500468174001359 0.000366124495977202 6.53891043739786e-08 0.0014034159888776 0.00238658338004384 1.62617726033137e-06 0.00039169939600591 3.04911432235328e-05 3.01117537810855e-05 0.000722424365804982 0.0062115373813243 0.00137752929315945 6.89201425273601e-06 3.98322609370003e-05 0.00296873885184496 0.000190862544205574 0.00331356403757962 0.00236847230712623 3.04836982880598e-06 6.43767987256052e-06 0.00183245906558147 XM_005223261.1 C23H6orf106 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf106 (C23H6orf106), transcript variant X1, mRNA. 0.0 7842 100.00 0.642382148662627 NM_024294.2 C6orf106 Homo sapiens chromosome 6 open reading frame 106 (C6orf106), 0.0 3966 79.98 0.647997635584454 TCONS_00133922_2 sp|Q9H6K1|CF106_HUMAN CF106_HUMAN Uncharacterized protein C6orf106; 0.0 596 96.98 0.996563573883162 1 coding AGGAGGCGGAGGCGGCGGCGCAGCTAGAGGCGGCGGCGGCGGAGGCGGAGGCGGCGGCGCCGGGGGGGTGGGAGGGGGGGGAGCGCGAGAGCGAGTGAGCGGCTGAGAGAGTTTACCCCGATGAGGCGGTGAGAGGCCCGGGGCCTACCTCAGCGGAGCGGGCTCGCGGCGCCAGCTAGCAGCGGGCCCCCTCCTGGTCCCCGGGCCCGGCGGCGCGGCGGCTGCTTGGTTGTGAGGAGGCGGGGAAGCGAGTGTCCGGCCCCAGCCATGGAGGGTATGGACGTGGACCTGGACCCCGAGCTGATGCAGAAGTTCAGCTGCCTGGGCACCACGGACAAGGACGTGCTCATCTCCGAGTTTCAGCGGTTGCTCGGCTTCCAGCTCAACCCGGCCGGCTGCGCCTTCTTCCTGGACATGACCAACTGGAACCTACAAGCAGCAATTGGCGCATATTATGACTTTGAGAGCCCAAACATCAGTGTACCCTCCATGTCCTTTGTTGAAGATGTCACCATAGGAGAAGGGGAGTCGATACCTCCTGATACTCAGTTTATAAAAACGTGGCGGATCCAAAATTCTGGGGCAGAGGCCTGGCCTCCAGGGGTTTGTCTTAAATATGTCGGGGGAGACCAGTTTGGACATGTGAACATGGTGATGGTGAGATCGCTAGAGCCCCAAGAGATTGCAGATGTCAGCGTCCAGATGTGCAGCCCCAGCAGAGCAGGAATGTATCAGGGACAGTGGCGGATGTGCACTGCTACAGGACTCTACTATGGAGATGTCATCTGGGTCATTCTCAGTGTGGAAGTGGGTGGACTTTTAGGAGTCACGCAGCAGCTGTCATCTTTTGAAACGGAGTTCAACACACAGCCACATCGCAAGGTAGAAGGAAACTTCAACCCGTTTGCCTCTCCCCAAAAGAACCGACAATCAGATGAAAACAACTTAAAAGACCCTGGGGGTTCCGAGTTCGACTCGATCAGCAAAAACACATGGGCTCCTGCTCCTGACCAAACCGAGCAAGATGAGAATAGACTCTCACAGAACTCTGTAAATCTATCCCCCAGCAGTCACGCAAACAACTTATCAGTAGTGACTTACAGTAAGGGGCTCCACGGGCCTTACCCCTTCGGCCAGTCTTAAACGGGTGTCAGCAAGAAGAAAAACTAACAAAAGAAGGCTTGACTCTGGGGGGGGAAGGGCAGGGGGTTCCTCTGGATTGCAGACCACATCGCACGGACCCCTGGCTCTGACCCCCGTCCTGGAAGAAGAGGAAGACGCAGAAAAGACTAGTTTTGAGTAAACTCAGTGTGCATGTGTGAATGCCGAGTCGCAGGAGTGGTGTTGAGGCTACCAAGAAGAGATCCATGCAGCCACTTTGGGCTTCGTTTGTTAGGTGTCAGTCTAACAAGTCACTAGGTTGCTCGGGAAGGAAAAGAAAAAAATGTTTAAATGGGGGAAAAAAGCCATCTTTTTAAACAAAAATTATTTTGCCTACAGACAGGTTGTAGTTTTGAGCACATGTTAATTTTCTTCCCCTCTTTCCCCACTTTTTTTTTTTTTTTTACTATTTTTTTTTTTTTTTAGATAAGGGATAACATGCTGTTTATAGAATAGCTGCTTGCTCTGGAAGCGATTCAGGTCAAAAGCTGGCGCGGCCTGCTCAGGACCGTGCGGGTCGGCGCTGCAGGACGACACCTGCCTCCTGACTCCTCGAGTCTCTGACCCCGTTTTTTTAATGGCACCAGCCAGTGAATTACCACGCTTTTCCTCCTCTTTTCTCTTTAATCTTCTGTTGATGTACACCTTTGACATTTGTATGCGTCAACCCTGTGGCTTGTTACCACCAGAACCTCTCCGAAGACCAGACTTCCCTGTGCGGCCAGCAGTGGAAGCCTGGAGGACAGAGCGCAGGTGACGGAGCTTCTGAGGCCGAGAGGTGTCCGCCTGCACACGCGTGTAACAGCTCAGATCACTTCCCTTCCCGGCGCCGGCACGCTCACCGCACAGCTCTCTCGGATGCTCGGCACACAGCGGCTCCCCATTCACTCTGGGAGCAGTGCCTCTGTGCTGCGTGCATGCATGCGTGCATGTGCGCCCTGTGCCCGCGCGCAGGGGTCGGTGCTGCTCACCAGCGAGTGTGCAGCAGGCGGGTGTGAAGGTGCCCATGCTTCTCTGTTGTCACACAGCTCCCTCCCCCGTGTCTCCCTGCCGTCGTCCCGTGCGGTGTCTTCTCAGCCTGTTAGTGGAGGCTGTGTTATTCAGGTATGAAAACGTAGCCCCAGGTTGGGGATTCGCCACAGGGAAGGGCCACGCTTACTGACCGCGTGATCTTGGAGACCACGTTTTGCCGGGAATGAAAGGACCCTGCCCCAAGCAGGATGCTTAGTGACTGGGAGGAGGCGGGCTCGGGGCAGCCCCGCGGAGCCCGGGCGGACAGGCCGGCTGCTCACAGGAACGGGTGGCCCCACGGGCACCCTGTGGGTTCTGAGCAGGCTGGGATGTGGACGCCTCCATGGGGAGCTGGAACCAGGCCAGAACAGCTGTCTGCCAAAGATACAAGAATATGCAAAGGCCCTCTTCTCTTCTCAGCCCCTCCTTCCCTGAGTCTTGGTTGGTTTGATAGCCGGGATACAAATCTAGGGTGCGGCTGCTGGGTCGCCTGCCTGTTGCCACACCGTCCCCCTCCCCGGGGGTGTGAACCGGCAGGGAGGCCAGGTCGATGAGGCAAGGGGTCATATAGCCTGGGTGTGGGTGAGGGTCTGCCTGCCTATCTGTCTGTCTGGGTGTCTGAGTTTCGAACGTGTGTGTTGTTTGTGCCTCCTCATTCTCTTCTGAGACTGTTGTTTTTTTAAAAGCTTGACTGTGAGAGAAAAGCTTGTATGAAATTCCCCCAATGCCTCCCCACCTCCCCCCCACCCCAGAATAAAGGGGGAGTAAACTCTGGTCCACTGGAGGAACCCCAAGGGAGGGTGGAGCCAGGCGCTGAGAGGGCGGTGCAGCTGGGGTGGACCAGGGCTCACCCTGGGGCACCCACTCTCTATGCACACCAAGAGCACCCCATTGCCAGCAGAGGAGAGGGGAGTCCCTGCCGGGTTCCCAGGCTACCACAGGCCTGAGCCAGGGGCTCACGATGGCTTTTTGTTTGAAGGCCCTGCCAGGCCCAGACTGCCACCACTGTTGGTACCAGCCTCCCAGACACTGCCCCCACTGGAGCACACCCCCGCTCAGCCCCTCCTGGCTTGCTGGCATCACATCTTCAGCTGCCCGCATGGGATGGCAGGAGGCTTCACATCCCCTGGTTCCCAGCCTCCTGATCTGCCCCACACCAGCCGCCCCTTCCCCTTGCCCCACGGGGAGCTGCCTGCCATTGGTTACTCAGCATTGGCTTCCAGGTCACCGTCAGTGGGTCTGGCCCTGCCAGGGGGCTCCTGCTCCTCCTTTTGCTTCTAGGCAATCTCACCTGGCAAGGTAATTGTCCCAAGCATGTGGGCTTCCCTCCCAAGAACAAAACCATTTCTGTATGTGTCCTCAGAGAGGTGGGCTCCTTGCCGAGACCAGAGCATGCACAAGCTGTGGAGTAGGGGTGGGAGGAGTCTGAGGTTGCCCCAGGACCTGGAGGCCCTTGAACCATCATCTGTCTCCTCTCTCTGACTTGAGTTCCAAGCAAGTCCTGGAGTCCCTCTTCCATCCTGGTGGGACGGCAGAGGCTACCCCCTCAGTTCCTCTTGGACTCTTTACCAAATGGCAGGCTGCCTCTGGGCAGGACCACCTGTGTCTAGCAGGCAGGAGGGGAGGCATGCGCCATCCTTCAGGACCTGAGTCCACGGGGGAGGCAGAGGGGCTCAGGCTTGCGAGGAACCTCTCTGTGTGCATGGAGTGAGGTGTGTGTGGGTGTGTGTGCACGTGTGCATGCTTTTTTTCTTTTTGCCACGGGGACAGTTGAATTTGGGGCATTTTTCTACAAGAAACAAGCTTTCTCTCCCCCATCAAGGACTGGCCGTAAACTTTAGTCCATCAAAGGCACTTGTAGCCAGAAAAGAACCTCACCAGAACAGCTGGTGTGGCCCCAGGATGGCCAAGGAGGGGAGAGGGCTTAAGAATAAACACCTCCCCAAATCGAGTGTGAGCCCCGGCAGGAGAGGGTGGTGGGGTTGCCAGGCCCCAGAAGTGCAAGCCAGTTCCCTGCCCCACCCCGCCCTGCCTTTTTGCTGTTTCCTTGGGTGAATGCTGGAGCAGCTTAGCTGCTGCTTCCTCCTGGACACTGGCGTGTAGCAAGCAAGCTGGGTGGGTGTTCCTGGTGGGGCCTCGTGGTGCCTGGGAGGAGATGAAGATGAGGAGGTTTTTCCTTACTGTATAAATGAATATTTGTATGATTAAATTAACACACACCAAAAAAAGAGAAACAAAAACCCTATTTTCATGTGTGTCAGTGACTTTATCGCGCCCTGAAGCCCTGTGTAGCCTGCTCTGTGACCCGGTCATGTGACCAGAATCTCCTTGCAGTGGCCTTCCGGTTCCCAGGGCCCCTGCCATGCCTCTGTTAGGCACTACCCCATCCCCAGCACAGATGTACCGGTTAGTGTGGACTGGCAGCGGGCACTGTGTGGACACGTGCTGCGTGTCAGGCCCGGTGTGGGGGTGATAACACCAAGCACCACCAGCCTCTCCTACTGGAGAAGCAGACAAGGCTGAGTTGGGACTGGGACTTAGAAGAGAAGGAACCTTTTCCCTGATGTGTTTCCTTGGTAGTTCTGGTTGATTTCGGATTAGATGCATTTTTGCAGAACCATTTAGGGCCCACACTCCAGGCAGTTGACAAGCAAATCTGGATCCTACCCCCATGTACTTTTGTGAGACAGACCTATGACCTTGGCTAGGAGATGGTGAGGCAGGTTTCAAGGTCTGTAGCATGAAAGAAACTTAATTGACAAATGCATTAGCAAATGGTGGGCTCACTAGATCCATGCTTTCATGACTCTTGGGAGCTCAGAACTCAGCTTTGTCCTCAGCCACATCACTCTTGTGTGTATGTTGAAGGGAAAGTGAGATCAGAGGGGGAAGAGAGTTACTTGTCACCCAGGCTGGGACCCAGCACATCGGCTCCCAGATGCTGGCGTTTTCACTTAATTGCGGGCCTTCACCCTGTCTAGCAGAGCTGAATGTTCTAAATGGTGGCCCTGGCGCTGAGCCAGAGTCTAGGATGTAGGTATGGGGAGGGGGATTCCCCAGCCATCGCCCTGTGGGCAGTTTGGTGAGGAAACCTGTGGCCACAGATTACACGAGACAGAGGTGCCACAGAAGAACCAGTCTTGGCCACAAGGTCTCTGTATAGCGTGACACGGAGCCCAGTGCGAGGGAGACTGGCCCAGAGACCCCTGGGGTGAGCACCTTGCCTCCGCCCGTGCCGTGTGAGTGCTCCCGCATCCTGCTTCCTTCCAGGTACCCGCGGCTATTTGTTTTCTGCAGAAGAAGGGCCCCCACCCTGTCACCTGGGTCTTCTGGCAGCTCAGACCCACTCCCAGGCCTTCCCCAACACCTCCGCCACTGGACAGTTATTTGCTTGGCAGAATCTGTTTGTCTTTGGGGCTGTAACCTGTCAAGAAGTCACCAGGCCCTGGGAGAAAGAAGCAGATTTGATGGTAGCTCCTGGCCGGAACCATTCCCACGGGGGCTAGGTGACGGAGGGCGCTCAGCCGAGCTTTTGTCTGGGGGTGTGGTGGCGGAGGTTGCAGTGGTGTGGGCCCAGCCCTCCAGGCAGAGCAAACAGGTCTTCTCGGCCACCTCCCTGTCCCAGCTCAGGTGGTGCTGGGTGCCTCCCACCCTGTTCTTGGGAAGGCCCCTCCTTTATCTGCTTGCTCTGACCCGGCCACTTTCCCAGACACCGCGTGGTGTCCAGCCCTGTCTGGCGGCCAAGAGAACAGGCTCCAAGGGCACTCATGGCCGCCCTTTATTTCAATAATTAAGTAATGGGAGCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGGCCAGAGAATCCCATGGACAGAGGAGCCTGGCAGGTTGCAGTCCATGGGGTTGCAAGAGTCGGACACGACTTAGCGACTAAACCACCACCACCACCAGAGCAGGGAGCGGGCAAGGCTGCTTGAGAAGAGTATATGAGTTTGGGAGTCACGAGTGTTCAGAGAATGGATTCTGACAAGCTAGCGTGACTGACGGATGGGCCTCAGATACCTCCTCTGTAAAATGGAGATGTATTGGATTAGAAAGCAGGACTTGGGTGGAACTCACAGGTTTTTAAAAATATTCTGAGGTTCTGTGATCTGGAATAGTGCTTCTCAAACCTGACTGTTAAAAATGCAAATTCTGATTTAGTAGATCCTGCGGAAGAGGACAAGATTCCACCATTCTAACAAGCACCCTAGTGAATGGGCTCTGCTAGTCCTCCGACCGCACTTCACGTGAGGATAGTAGGTGGTGGTCTGAAGGGGTTCACCCACCCCTGCAGCCACCTGGGCTAGGAGACCAAGCCAGATCTAGCCAGGGCTGTGTTGTCCAGACCCACGAGAATTGGAGGGAGCTGAGATCTTTTAGAACGGTAATGTTCAAGCTGGGCCGTGGCTCCCCGACATTTCCCAGGGTTTATCCAAGGCTGTGATTTCTGCCTTAAATATTATTTCTAGCGTTCTGTTTTTCCATCACAAACAATAAATGTCTGAGTGTCCACCATAATTATGGTACTATTGGCTGACCAACTCCTATTAAACTGTTTATATGGA EMBV3_09230 TCACACAGGGAGTCAGGACACAGAGGGAACTCCTGAACCATTGACACTCCAGCAAGGGGA Gene BVT0102_252410 + 0 NULL GK000005.2:33342787-33619908 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25917 GTGCCATTTTCAACAGCATTTGCTCACTGCGTCTCTGTCACATTTCGGTGATTCTCACAG Gene BVT0102_253134 - 1 EMBV3_35351 GK000030.2:60170264-60196557 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16789 CCTTTTTCATCCTGATCAAGCTTCCCAGGTGGTGCTAGTGGTAAAAGAACCCACCTAGAA Gene BVV0101_000882 - 1 EMBV3_08852 GK000009.2:52048827-52921131 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12702 AGACCCAGCGAGGTGAAGGTGAAGACCTACATGGCTGTTCTGGCTGCGATTGTTCATTAA Gene GeneID:100337465|LOC100337465:XM_002697258:475_cdna Constitutive 2 NULL GeneID:100337465 23 GENE LOC100337465 NULL alanyl-tRNA synthetase 2, mitochondrial-like EMBV3_30281 TGTGACTCAAACCTGATTCATAACTCTGACCTCCCAACCTAACCACAACCCCCTGCAGCA Gene BVV0102_128414 + 0 NULL GK000019.2:15141383-15233255 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43627 GGCTTGCCCATGAGCGTAGTGTGAAGCTGGATGCTTTCCAGTGGGTAGAAGAGCTACAAA Gene GeneID:515167|C9H6orf185:XR_084196:180_cdna Constitutive 0 NULL GeneID:515167 9 GENE C9H6orf185 NULL chromosome 6 open reading frame 185 ortholog EMBV3_01260 TTCTCTTTCGTGCCCCAGATCAGCCATTCTCAGATGTGCCCCGTGTTCAGGATGCCATTA Gene GeneID:286798|TNS1:NM_174766:35_cdna Constitutive 0 NULL GeneID:286798 2 GENE TNS1 TNS tensin 1 EMBV3_35785 TGCAAGGAGAACTACTGTCTTATGATCACAGTGAGATCAGAATTTAATAAGGACTTCCGG Variant GeneID:404156|CD63:NM_205803:926_cdna 304^378 1 EMBV3_40800 GeneID:404156 5 GENE CD63 NULL CD63 molecule EMBV3_32764 GAAAAAAGATGAAGGTGCTGGGGAGGAGCAAGCCACTAAGAAGAAAGATTGAACCCTCCC Gene GeneID:281348|NEFL:NM_174121:36_cdna Constitutive 0 NULL GeneID:281348 8 GENE NEFL MGC139791 neurofilament, light polypeptide EMBV3_32485 GCAATTTCCTGCCATTTTGCGGATGCCAACTGTCACTACATAGATGTGGAGGGCACCAGT Gene GeneID:281400|PHYH:NM_174142:52_cdna Constitutive 1 NULL GeneID:281400 13 GENE PHYH NULL phytanoyl-CoA 2-hydroxylase EMBV3_43306 CTGTCAGGGTGGAGTTGCAGCAGTGGACACAAAGTCAGAACCACCAAGGTATCCAGGGGT Gene GeneID:510868|LOC510868:XM_002686177:348_cdna Constitutive 0 NULL GeneID:510868 3 GENE LOC510868 NULL similar to family with sequence similarity 19 (chemokine (C-C motif)-like), member A3 EMBV3_10525 TGTGAGAACTGCCTGCTGCGCTTCCGCACTCACCGCTCGCTCTTCAAGCATCTGCATGTT Gene GeneID:538455|ZNF414:NM_001038175:78_cdna Constitutive 0 NULL GeneID:538455 7 GENE ZNF414 MGC134020 zinc finger protein 414 EMBV3_04311 GATCGAGTCCCTCCGGAACTCACACTCCAGATAAGCCAAAATGGTTTTGCTTACAAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18458 TCAGTGTTAGGCACGGAGTAACTGTTTACCTCTGTTGAATTCCCCACCAAGGCCTGGAGA Gene BVV0102_354969 + 0 NULL GK000002.2:97056674-97070143 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103131 TCONS_00103138 TCONS_00103139 TCONS_00103134 TCONS_00103140 TCONS_00103141 TCONS_00103146 TCONS_00103137 1 XLOC_062020 Coding TCONS_00103138 XLOC_062020 Coding Coding PIKFYVE 2:96979038-97059856 j TSS76646 9605 1 TCONS_00103138_10 2098 42 0.881670935570486 0.00015434488436813 3.2941777992425e-05 2.50824308035103e-05 6.21853937402757e-14 8.16149951875178e-06 1.14809495315252e-124 6.63282077677614e-11 6.27638602872228e-09 2.03202626654807e-10 2.27169940870135e-07 2.39242104393093e-15 1.03253252222744e-10 1.9571138041531e-12 1.55051967781381e-46 2.1139551735819e-52 0.000489536875549627 3.84027951679411e-11 0.000367645430388835 1.09732143455345e-05 3.13622628576659e-45 6.08055259882785e-06 0.000519588988842246 0.000161418047485064 0.000477848638568499 2.10893841514282e-05 1.17313559055875e-05 8.693659243624e-31 9.20682518309316e-06 0.000218544037240011 4.13503968349168e-15 XM_005202763.1 PIKFYVE PREDICTED: Bos taurus phosphoinositide kinase, FYVE finger containing (PIKFYVE), transcript variant X3, mRNA. 0.0 1.730e+04 100.00 0.998750650702759 NM_015040.3 PIKFYVE Homo sapiens phosphoinositide kinase, FYVE finger containing (PIKFYVE), transcript variant 2, mRNA. 0.0 9528 88.18 0.782613222280062 TCONS_00103138_10 sp|Q9Y2I7|FYV1_HUMAN FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase; 0.0 4068 94.76 0.99952335557674 0 coding 0 0 0 0 0.211857827948256 0.527606757418802 0.00416402385641707 0.930278950860796 TCCTGCCGCAACCGCCGGCGGCCTGAGTACCGCGGCGCTAGGCTCCTTGCACCTGGATCTGGTGAACCCGAGGCTGGGGTGGAGGGTGGCCTGCGGGGCTGGGGCGGGAAGCGCAGACTCATGAAATGGCCACAGATGATAAGACTTCCCCAACATTGGACTCCGCTAATGACTTGCCTCGGTCTCCTACCAGTCCTTCTCATCTCACACACTTTAAACCTCTGACTCCTGATCAGGACGAGCCTCCTTTTAAATCAGCGTATAGTTCTTTTGTCAATCTCTTTCGATTTAACAAAGAGAGAGGAGAAGGGGGCCAGGGAGAGCAACAGTCTCTGAGTGGAAGTTGGACCAGCCCTCAGCTCCCTTCAAGGACACAATCTGTGAGATCACCTACACCTTATAAAAAGCGGCTTAATGAGGAGTTCCAGCGTCGATCTTCAGTGTTAGACACCAGAAGGAAGGCAGAACCTACTTTTGGAGGTCATGACCCTCGCACAGCTGTTCAACTCCGAAGCCTCAGCACAGTATTAAAACGCCTCAAGGAAATCATGGAGGGGAAGAGCCAGGATAGTGACCTGAAGCAATACTGGATGCCAGATAGCCAGTGTAAAGAGTGCTATGACTGTAATGAGAAATTTACCACTTTTAGGCGCAGACACCACTGCCGACTCTGTGGGCAGATTTTCTGCAGTCGTTGCTGCAATCAAGAAATCCCTGGAAAATTTATGGGTTATACAGGGGACCTCCGAGCCTGTACATACTGTAGAAAAATAGCCTTAAGTTATGCTCATTCCACAGACAGTAATTCCATTGGTGAAGACTTGAATGCTCTTTCAGACTCTGCTTCCTCTGTGTCTGTACTTGATCCAAATGAACCCCGTACACCTGTGGGGAGTAGAAAAGCCAGCCGCAACATATTTTTAGAGGATGATTTTGCCTGGCAAAGTTTAATTCATCCAGACTCCTCAAACACTGCTCTTTCAACAAGACTTGTATCTGTTCAAGAGGATGCTGGGAAATCTCCTGCTCGAAATAGATCAGCCAGCATTACTAATCTGTCACTGGATCGATCTGCGTCTCCAATGGTACCATCATACGAGACGTCTGTCAGTCCCCAGGCTAACCGAACGTATGTTCGGACAGAGACCACTGAGGATGAACGCAAAATTCTTCTGGACAGTGTTCAGTTAAAAGACCTATGGAAGAAAATCTGCCATCACAGCAGTGGAATGGAGTTTCAGGATCACCGCTACTGGCTGAGAACACACCCCAACTGCATTGTAGGAAAGGAGTTAGTCAACTGGTTAATCCGAAATGGACACATTGCTACAAGGGCACAGGCTATAGCAATTGGACAGGCAATGGTGGATGGACGTTGGCTGGATTGTGTCAGTCACCACGACCAGCTCTTCAGGGATGAGTATGCGCTGTACAGGCCGCTGCAGAGTACAGAATTTTCCGAGACCCCTTCTCCGGACAGTGACTCGGTGAACTCTGTGGAAGGACACTCTGAGCCATCCTGGTTTAAAGACATCAAGTTTGATGACAGTGACACTGAGCAGATAGCTGAAGAAGGTGACGATAATTTGACTAACTCTGCCAGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAGTGACTCAGCCGCTTCCATCAGCCTGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCCTCACCCTGCTGACCAAAAAGAGTATTTGATTTCTGACAATGGAGGACAACAGCTATCAATAAGTGACGCCTTCATCAAAGAATCCTTATTTAACCGTCGAGTTGAGGAAAAATCCAAAGAACTGCCTTTCACACCTTTGGGCTGGCATCATAACAACCTGGAGCTGCTGAGGGAGGAGAATGGAGAGAAACAAGCTATGGAGAGGTTGCTTTCAGCTAATCATAACCACATGATGGCGCTGCTCCAACAGTTGCTCCATAGTGAGTCATTGTCAACGTCTTGGAGGGACATCATCGTATCCCTGGTCTGCCAGGTTGTTCAGACAGTCCGACCTGACGTCAAGAACCGGGATGATGACATGGATATCCGCCAGTTTGTCCACATCAAAAAAATCCCAGGTGGAAAGAAATTTGATTCTGTGGTTGTCAATGGATTTGTTTGCACCAAGAATATTGCACATAAAAAGATGAATTCTTCTATTAAAAACCCCAAAATTCTTCTGCTGAAATGTTCCATTGAATATCTCTACAGAGAAGAAACCAAATTTACTTGCATTGATCCTATTGTGCTTCAGGAAAGGGAATTCCTAAAGAATTATGTTCAGCGAATAGTTGATGTTCGACCCACACTGGTTCTGGTTGAGAAAACGGTATCTCGAATTGCACAGGATATGTTGCTGGAACACGGCATTACTTTGGTCATTAATGTAAAATCACAAGTTTTGGAACGAGTTAGCCGGATGACCCAAGGTGATTTGGTGATGTCAATGGACCAGCTGCTTACCAAACCCCACCTGGGCACCTGTCACAAATTTTACATGCAGATGTTTCAGTTGCCTAATGAACAAACCAAGACACTGATGTTTTTTGAAGGCTGTCCACAGCACCTGGGCTGTACAATCAAGCTTAGAGGAGGCTCTGATTATGAGCTGGCTCGAGTTAAGGAGATCTTAATATTTATGATCTGTGTAGCTTATCATTCTCAACTAGAAATCTCCTTCCTTATGGATGAATTTGCTATGCCTCCTACATTAACGCAAAACCCTTCCTTCCATTCTCTGATTGAAGGACAGGAGGATGAAGGGGCTTCACAGGAGCCATTCAGCGGAAGTCCCCTCCCCCGGGAGCCTGACTTCCCCCCAGACTTTCTGCCTTCTGATGATGGCAGTTTGCTAGAAACAAGGATTCTGTTTGAGAAGGGTGACCAGGAGAATAAGAGTGTGCCACAGGATGTTGCCTCTTTGAAGCCTCAAGAGCATGCCCCAGCAGCTTGCCCGATGGGTGCCCCCTGTGCTCTCTTTCCATCAGTACCAGAGTCATTGCTTCCGCTCCATGTGGATGACCAACAGGACGCCATAGGCAGTGAGCAGCCAGAGGCTTTGCAGCAAACAGAGGAGCTTCCGGATCCCACAAGCCAGATGAGAGCCTTTAGAGACCCTCTGCAGGATGACACTGGCCTGTATGTTACCGAGGAAGTTACCTCTTCTGAAGATAAACGGAAGACTGATTCTTTGACCTTTAAGCAAGAGTTGAAAGATGTGATCCTCTGTATCTCGCCAGTCATCACATTCCGGGAGCCCTTCCTTTTAACTGACAAGGGCATGAGATGCTCTACCCGAGATTATTTTGCGGAGCAGGTTTACTGGTCTCCTCTCCTCAATAAGGAGTTCAAGGAAATGGAGAGCAGGCGAAAGAAACAGATGCTTAGGGATCTCTCTGGCCTTCAGGGCATGAATGGAAGTGTTCAGGCCAAGTCCATTCAAGTCCTGCCCTCACATGAGCTCGTGAGCACCAGAATTGCTGAGCACCTGGGGGACAGCCAGAGCTTGGGGAGAATGCTAGCCGATTATCGGGCCAGAGGAGGAAGAATCCAGCAAAAAAACTCAGACCCTTTTGCTTACTCAAAGGAGGCATCAAGCACCTCAAGTGGAAAATCAGGAAGCAGAACTGAAGGTGATGAAGAAAAAGGGTTGATTACCAGTGATGCAGTGTGGTCGACAAAGGTGGACTGTCTGAACCCTGTCAACCACCAGAGGCTGTGTGTGCTCTTCAGCAGCTCTTCTGCCCAGTCCAGCAACGCTCCCAGTGCCTGTGTCAGTCCTTGGATTGTAACAATGGAATTTTATGGAAAAAATGATCTTACATTAGGAATATTTTTAGAGAGATACTGTTTCCGGCCTTCCTATCAGTGCCCTAGCATGTTCTGTGATACCCCCATGGTGCACCACATTCGACGCTTTGTCCATGGCCAAGGCTGTGTGCAGATAATCCTAAAGGAGCTGGATTCTCCAGTACCTGGATATCAGCATACAATTCTCACCTACTCCTGGTGCAGAATGTGCAAACAGGTAACACCAGTTGTTGCTCTTTCCAATGAGTCTTGGTCCATGTCGTTTGCAAAATACCTGGAACTTAGGTTTTATGGGCACCAGTACACCCGCAGAGCCAATGCTGAGCCATGTGGTCACTCCATCCACCACGATTATCACCAGTATTTCTCCTATAACCAGATGGTGGCGTCTTTCAGTTATTCTCCCATTCGGCTTCTTGAAGTGTGTGTTCCACTTCCCAAAATATTCATTAAACGTCAAGTCCCACTAAAGGTGTCCCTTCTTCAGGATCTGAAGGACTTCTTTCAGAAAGTTTCACAGGTATATCTTGCTGTGGATGAAAGACTTGCGTCTTTGAAAACTGATACATTTAGCAAATCAAGAGAGGAAAAAATGGAAGATATCTTTGCACAAAAAGAGATGGAAGAAAGTGAGTTCAAGAGCTGGACTGAGAAGATGCAGGCGCGGCTCCTGTCTTCCTCCATGGATACCCCCCAGCAACTGCAGTCAGTCTTCGAGTCCCTCATCGCCAAGAAACAAAGCCTCTGTGAGGTGCTGCAAGCTTGGAATAACAGGCTGCAAGACCTTTTCCAACAAGAAAAGGGTAGGAAGCGGCCTTCAGTTCCTCCAAGTCCTGGAAGACTGAGACAAGGTGAAGAAAGCAAGATAAGTGCAGTGGATGCATCTCCACGGAATGCTTCTCCAGGACTTCCAAATGGAGAAAAAGAGGACCGCTTCTTAGCCACCCTTTCCAGTCAGAGCTCCACCAGTTCCCCCCATCTCCAGCTGCCTACTTCTCCTGAAGGCGTGCCTGAGCAGGTCATGGGAGGGCCCCCAGATCTCGATACTGCCAGCAGTTCTGAAGATGTATTTGATGGACATTTGCTGGGATCTACAGACAGCCAGGTGAAGGAAAAATCAACCATGAAAGCCATCTTTGCAAATTTGCTTCCAGGAAATAGCTATAACCCTATTCCATTTCCTTTCGATCCAGATAAACACTACTTAATGTATGAACATGAACGAGTGCCCATTGCAGTCTGTGAGAAGGAGCCCAGCTCCATCATTGCTTTTGCTCTCAGTTGTAAAGAATACCGGAATGCCTTAGAGGAATTGTCCAAAGCCACTCAGCGGAACAGTGCTGAAGAAGGGCTTCCAACAAACAGTACTTTAGACAGCAGACCAAAGAGTAGCAGCCCAATTAGACTACCTGAGATCAGTGGAGGACAGACAAACCGTGCGGTAGAAGCAGAACCACAGCCAACCAAAAAGGCTTCTGGAATGTTGTCCTTCTTCCGAGGGACAGCAGGGAAAAGCCCTGACCTCTCTTCCCAGAAGAGAGAGACCTTACGTGGAGCAGATAGTGCTTACTACCAAGTGGGGCAGACGGGCAAGGAGGGGACGGAGAATCAAGGCATTGAGCCTCAAGATGAAGTAGATGGAGGAGATACACAGAAGAAACAACTTACAAATCCTCATGTGGAGCTTCAATTTTCGGATGCCAACGCCAAGTTTTACTGTCGGCTCTACTATGCGGGAGAGTTTCATAAGATGCGAGAAGTGATTCTGGGCAGCAGCGAAGAAGATTTCATTCGTTCCCTTTCTCACTCTTCTCCGTGGCAGGCCCGAGGAGGCAAATCAGGAGCTGCCTTTTACGCTACTGAAGATGACAGATTCATTTTGAAGCAAATGCCTCGTCTGGAAGTCCAGTCTTTCCTTGACTTCGCACCACACTACTTCAATTACATTACAAATGCCGTTCAGCAAAAGAGGCCTACTGCATTGGCCAAGATTCTTGGAGTTTACAGAATTGGTTATAAGAATTCTCAGAACAACACTGAGAAGAAGCTAGATCTCCTTGTCATGGAAAATCTTTTCTACGGGAGAAAGATGGCACAGGTTTTTGACTTGAAGGGTTCACTTAGGAATCGAAATGTAAAAACCGATACCGGGAAAGAGAGCTGTGATGTTGTTCTTCTGGATGAAAATCTCTTAAAGATGGTTCGAGACAACCCTCTCTATATCCGTTCTCATTCCAAAGCTGTGCTGAGAGCCTCGATCCGGAGCGACTCCCACTTCCTTTCTAGCCACCTCATTATAGACTATTCTTTGCTAGTTGGGCGAGACGATACCAGCAATGAGCTAGTAGTTGGAATTATAGATTATATCCGAACATTTACCTGGGACAAAAAGCTTGAGATGGTTGTGAAATCAACGGGAATTTTAGGAGGACAAGGTAAAATGCCGACTGTGGTCTCTCCAGAGTTGTACAGGACTAGATTCTGTGAAGCCATGGACAAGTATTTCCTGATGGTGCCAGACCACTGGACAGGCTTGGGTCTGAACTGCTGAAATGAAGCACATACTCTGAAACGGACCAGGAAGAAAAGGGGGCCTGGAACCAAAGGACCACAAGTCAGCTACATGTTTTATTTCTTTGTCACATTCACCACAGTGTGCAAAGGCCTTTCAGTTCTGAAGTTGGGTAGACCATCTGTAGCTGAAGGGTTGAAACTCCATGGATTTGCACTTTGGTTTTTGATACCTACAAGTTAGCTAACCGTGGGCTGGGAAATTGCACAAGTATTTTGTTCACATAAGCTGAAATCTAGATTCATTTCAAAGGTCTGAGAACAAATGTATGGTTGGAGATGAGATTGGTTGAGCAATGGGTTGTCATGTTTGCTGACAGTCCCCTTAAGCAAACAGTGTGTCATAGATTGTGACTCTCCTGGCCTCACATTGGATACATTCTTTTTCTGGAAAGGATTGGTAGAACTGGTGAATTTTTCTTGTGTTTCTTATGTAACAATTTAATGTTTGCCTATTATCAGAATTTCTGAAACTCTAAAACAATTCTGAATTATTCTATCAGTGGCCAGTTAAAGAGATGGATGCAAGCTGTTCTTGTTCTGCTGAGGAATTTGACTTAAATTGGGAATCCTGTCGTGTTCTGTATCTTGCCCTGTTTTCAAGTATGTTTGATATTTTTCAAGTTCTATCACTTCTTGTCTGGGTGACAGGAGGCCACAGCCATTAACTTCAGGCCTTTTTCTGGAGCTGTTTTTTAAGCCTGTTTACAACTTTTGTGCAAGTAATATGCAGAACTGCACTGTCTGCACGTGCTCATAGTTTAGGTTTTTCTCATACTTCAGGGAGATATTACTAAATGAGTCTAAAATGACTAAATCCCCAAAGGGATAATTATTAATGGAAGATTATTTTTAATCTAAAAAGAAAAATTAGGCCTGATCCAAGAAATTGGGCGAGGGAAGCACTCGCCTGTTCTTTGTAGAGGTAAAGGACCTGTAGTGTATACTATAGGTATAACTAGTGATTTGTGTAGCATCTATAAAATTACGATGTTTCCCATATGGACGTCCTTGTTCTCTAACTTTCTGTACGAATTTCTAGGCCAGTTCTGACTGTTGAGAAATATTACGAAATAAGGTATTCTTAGTAAGAAACTCCTTGTTTAATAGTTTCTGTTTGTCTAAAAAGTGATCAGAACTACTAAACTATGGCTAACAACACAACCCCAGATACTTTCTTGTGGCTTCTTTCCATAATAAGGCTAATTTGGGGATTTATAACATTTTAAGGTTTCCACCCTTTCAGGCTTCCCATAGTAGCATGTTTCTTTTGCAGCTTCCACATAATAAGAAAAAGTCTGGATACATTCCAGTTACAGAGACTTAAGTTTATGAAATAGGAACATTTTGGAAAGTTTACTTGAGAAAATGAAAGCATTAGTTTGGTGTTTGGTGTTTGGTGCTTATTAGAGACATGGTTTGCACTAGAAACAAGCTGACCAAGGGTTCTAACTGGTCTGATGACAAGCATTTTTTTTTTTTTTTTAAACATATGGTGTGCCTTTTGAACAATACAAAGCCCTGATGTTGGTTTTGTTGTCAAAGACCAGTCCAGAACTGGAAGATGTGGAGATATCCACTCCTCTCATGTCCAGGAACAATGGATACTGCATCTCATTTTGAGTGTAAACATGTCTTGGCGTCTCTGTTTATTTTTTTGTGTCAGGATACTTAGGGTTGTTTACCCTATCCATTGCTCACACCTGTAGTCAGGAACACTTCCAGGAGCAGGTGTCTTCCTCCAGATGCAATCAGATTGTTTATCTGTTTTGGTCTCAATACCTTATGTACAGCTTGAATGCTCCATTGAAATAGGTCTTGACAATAATGTGTCTTCTTGATTTTGGTTTCCTTGCCCATGACTTGAAGAACCAATTATTATTATTATTTTTTTAAGTACTGCTGTTGCTTAGGTATTTTTGTGGCTAAAAAATTCCAATGTAATGTAATCTGAAGTAATACTTGTTTCCTTGCAAGTGTGATCTGTCCATTTAAAACTGTCTTAATGAAGGGAAAATATAAAACTTAATTTGTCATGAGTGGTAGAACTGTATACCTGGCCTCCTGCTGCTCTTATTTAGGCCACTACCAGATATATAAGCCTTTTCAAATACTGTATACTCAGTGTTAGGCACCGAGTAACTGTTTACCTCTGTTGAATTCCCCACCAAGGCCTGGAGAACCTTGATGCTGAAAAATTAAGAATGAGGAAGGAATGTTAATACTTTCCTCTGTAGCATAAAAAACACATTCTGAGAATAGTTTATAGTAGCACAAGAAAGCTATGTAAACATGTTGCATTGTATAAAAATCTTATCTACAGATATAAACTGTTTTAATGCCATCAGAACTAAAAATATAAAGATTTCCTTTTCCTTTTTTACCCAAGCCTGAGAAAAATAAGGGGAATAAACTGTTGCAAGCCCTTTTGTAGTCTGTTGAATGTTTTAAATTTATAGATACTCAAATTTATAGATACAGAATGTCCTACTTATAATTGTTCCCTTGATTCAGCAAATGAGTGGTTTTCTAGCTTTGGCTTTTATTTGGTATTGTAAATAGTAGGGTTGTATTGGTTTTTGTGGCATTAGCTGTTCCTTGGCTTTTTACCCATTAATGGTGGACTTATATAAAACTGCTGAGGAAAGTTATCTACCTACAGAAAGTTTGCTTTAGCTAGCAGAGTACAAACCCTTGTGAATGAGCCTGGTGATAAAACAGACTAGGCCATTCATTATTCCTCAAGTGTTAACATACTGATTTAAGCAGTATTCAAACCATCTAGTGCAATGCCTTTTTTGTTTGTTTTTGTAACACGGGTGCAGTTGTATTATAGAAAAATAAAAATTACAATCATGCGCAGTTTTATTAATGCTGCTGTGCTGGTTTTGTAAAAGAAAAATGTACATTATGTCTTTGACAGGTTTAATTTTAACGAGAGAAATGACATTGTAAATCAGAATAGCCTCTTTTAATTTAATATGAAAAATCCAATTAACAATATTGAAAATACTTAGTGTATTATATTGTATATATTTCTCTACTTTGATTCCGGCTGTTTTATATCATTGACATGTTATTTAAGAGATAAAACTGCCTTGACCTTTTGGAAACTTAACACTGTAAAAAGAAGACTTACAATAAACTGAGAATCAACTTCACT EMBV3_12027 AGAACTAAACCAGTCTGTAATCCCAGGAGACCAGCTCAGATCCTAGTACCTGCTTGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25911 GTCTAACAGTCTGAATGAATCCATTTTCAGAAAGCTACTCTTTTACAAGATCCCCTATAT Variant GeneID:783553|LOC783553:XM_002687653:839_cdna 582^984 1 EMBV3_25126 GeneID:783553 5 GENE LOC783553 NULL hypothetical LOC783553 EMBV3_33151 AGCCCCTTGTCTGTCGCCCCTCACCCTGACCCCCACGTAAGGTCAGTCAGATGAAAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21175 GAAATTCAGCACGTGGGACAGAGACAACGACAACTACGAAGGGAACTGTGCGAAAGAGGA Gene GeneID:508090|FGL1:NM_001034313:19_cdna Constitutive 0 NULL GeneID:508090 27 GENE FGL1 MGC127898 fibrinogen-like 1 EMBV3_11737 CTCCATATGAAATCCTGTACGGCAGAACACCACCAAACCCACTAGATGCAGTCACATCGG Gene GeneID:100299879|LOC100299879:XM_002683954:1_cdna Constitutive 0 NULL GeneID:100299879 Un GENE LOC100299879 NULL hypothetical LOC100299879 EMBV3_24072 ACAGAATATGCCCATTTATTATTGCAGTATCCCAGTATATTATTATTGGGTTCAGCATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18196 CCCTGTTGTCCAGCGATGAAGATGTGCGTCATTCTGCATTTTATAGCCTGTTCCACTGCC Gene GeneID:404081|PRP6:NM_205778:35_cdna Constitutive 0 NULL GeneID:404081 23 GENE PRP6 NULL prolactin-related protein VI EMBV3_12532 CTGGTACCCGTACAACGAGAGGTTGATCTGCATCTACTGCGGCAAGTCCTTCAACCAGAA Gene GeneID:518084|ZBTB34:XM_002691586:124_cdna Constitutive 0 NULL GeneID:518084 11 GENE ZBTB34 NULL zinc finger and BTB domain containing 34 EMBV3_21521 CAACATGACCACAGTTCCAGAGGTGGTTCTTGCTAAGGAGGCGGGAATTTGCTACGAAAG Gene GeneID:617264|LOC617264:XM_002697748:256_cdna Constitutive 0 NULL GeneID:617264 24 GENE LOC617264 NULL similar to PRDX3 protein EMBV3_02696 TCAAGTACTATCTCTGGATGGACCCCCTGGCAGATCTCATGATGGGGGTGCTGCTTTCAA Gene GeneID:533456|COL21A1:NM_001102156:149_cdna Constitutive 0 NULL GeneID:533456 23 GENE COL21A1 MGC155235 collagen, type XXI, alpha 1 EMBV3_18160 GGCTGGCCCTTTGGAAGGTGCTTTCAACAGCAAGAAGTCCACAGACCACCCCAAGTATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33709 CGATGTCTTGAGAGGGGAAAGAGTAGTGGTAGAAGTGATGACAACAGAGAGAGCTTGGAA Gene GeneID:509965|CMPK1:NM_001046044:116_cdna UTR3_Alt 2 NULL GeneID:509965 3 GENE CMPK1 CMPK MGC137127 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic EMBV3_29814 TGAAAACCTAGTGAAACTATAGGGTCGGGGAAGCACAGGGAATCCGACAGCATCGACTTG Gene GeneID:615311|ZNF629:XM_002698067:45_cdna Constitutive 0 NULL GeneID:615311 25 GENE ZNF629 NULL zinc finger protein 629 EMBV3_08711 AGTGTGTGTTCTGCTACTGCTCTTGGCCTGGGTTGGTGGGTTTTTGCATGCTGTCCTTCA Gene GeneID:618678|LOC618678:XM_002683651:6_cdna Constitutive 0 NULL GeneID:618678 7 GENE LOC618678 NULL similar to olfactory receptor MOR231-3 EMBV3_00833 CAGGTGCTGCTCTTCCTGGTCTTAGCTGCCTTCCTCCTCTTTGTTTAGTACTTCATGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38292 GTCGAAGCTGCGGGCGGAGGCTGGACTAGGGCCGCTTTCGCTGCCAAGATGAAGAGCGGG Variant GeneID:508609|PXMP2:NM_001046008:102_cdna 62^431 2 EMBV3_22881 GeneID:508609 17 GENE PXMP2 MGC137246 peroxisomal membrane protein 2, 22kDa EMBV3_19289 GGAGACAAGAAAAAATGCAAAGATTATCTCAAGCAGAGATGACCAAGGTGCTGCGAAGCC Gene GeneID:512659|MPP7:NM_001100347:37_cdna UTR3_Alt 1 NULL GeneID:512659 13 GENE MPP7 NULL membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) EMBV3_11430 GAGGTGAGTGAGGGATGGATTAGAAACTGGGGATTAGAAGATGCAAACTATTATAAACAA Gene BVV0101_024130 + 0 NULL GK000011.2:24962487-25016564 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16564 GTTTGTACATTCCACTTCCAGTTGTTACAGATGTGAACTCTCATCTTTGTCATTAATTGT Gene GeneID:286815|GCH1:XM_002690949:298_cdna Constitutive 3 NULL GeneID:286815 10 GENE GCH1 NULL GTP cyclohydrolase 1 EMBV3_27226 GGCTGCTCGCACTGCTCTGATTTCGGTGTAGGGAGAATACAAGTTTCTTTGTTGCCTGAC Gene BVT0102_103512 + 0 NULL GK000005.2:51163886-51171818 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191818 TCONS_00191821 TCONS_00191828 TCONS_00191819 1 XLOC_117034 Coding TCONS_00191819 XLOC_117034 Coding Coding PPM1H 5:50861269-51168133 = TSS143683 6078 1 TCONS_00191819_2 514 10 0.980225703326892 0.00016504640823219 3.59227490719007e-05 0.000513134523714434 6.55222765724386e-05 0.000619869084980682 1.24099866946272e-11 8.03219905003071e-05 0.000365716903089612 0.00105635989340402 6.03683251976916e-09 1.56068601483305e-06 2.82474102213453e-05 6.13612663262876e-10 1.18157675278487e-05 2.57060305179509e-05 0.00235076231679596 0.000119993785429729 5.91232886618883e-07 0.000388010536267676 8.45940409368492e-08 0.000120142267764204 0.000305701969069225 0.000350020904398946 0.00134287061560413 0.000433112652713852 0.000119523536143147 0.000539118308319272 2.19250839812179e-05 1.74669874636634e-09 2.75483133224576e-10 XR_234571.1 PPM1H PREDICTED: Bos taurus protein phosphatase, Mg2+/Mn2+ dependent, 1H (PPM1H), transcript variant X2, misc_RNA. 0.0 6960 100.00 0.634748272458045 NM_020700.1 PPM1H Homo sapiens protein phosphatase, Mg2+/Mn2+ dependent, 1H (PPM1H), 0.0 4378 76.42 0.997367555116815 TCONS_00191819_2 sp|Q9ULR3|PPM1H_HUMAN PPM1H_HUMAN Protein phosphatase 1H; 0.0 1006 96.69 0.998054474708171 1 coding 0 0 0 0 -0.668627225293886 0.0097249926736745 0.0278016274999416 0.715159524661354 AGCCCGGCCCCCGCCGCCGCCGCCGACCCCTGCTCGCACCACTGCTGCCGGGCGCCGGAGTAATATGCTCACTCGAGTGAAATCTGCCGTGGCCAATTTCATGGGCGGCATCATGGCTGGCAGCTCAGGCTCCGAGCACGGCAGCGGCGGCTGCGGAGGCTCGGACCTGCCCCTGCGCTTCCCCTACGGGCGACCCGAGTTCCTGGGGCTGTCTCAGGACGAGGTGGAGTGCAGCGCCGACCACATCGCCCGCCCAATCCTCATCCTCAAGGAGACCCGGCGGCTGCCCTGGGCCACTGGCTATGCAGAGGTCATCAACGCTGGGAAGAGCACACACAACGAAGACCAAGCCAGCTGTGAGGTGCTCACTGTGAAGAAGAAAGCAGGGGCCATTACCTCAACCCCAAACAGGAACTCAGCTAAGAGACGGTCCTCGCTTCCCAACGGGGAGGGGCTGCAGCTGAAGGAGAACTCGGAATCGGAAGGCGTTTCCTGCCACTACTGGTCGCTGTTTGACGGTCACGCGGGGTCCGGGGCGGCCGTGGTGGCCTCCCGCCTGCTGCAGCACCACATCACGGAGCAGCTGCAGGACATCGTGGAGATCCTGAAGAACTCGGCGGTGCTGCCGCCGGCCTGCCTGGGCGAAGAGCCGGACCACACGCCCTCCAGCAGCCGGACTCTGACCCGCGCAGCCTCGCTCCGCGGAGGGGTGGGCGCCCCAGGCTCCCCCAGCACCCCGCCCACGCGCTTCTTCACCGAGAAGAAGATCCCGCACGAGTGCCTGGTTATTGGGGCTCTTGAAAGTGCATTCAAGGAAATGGACCTACAAATTGAACGCGAGAGGAGTTTGTACAACATATCTGGTGGCTGCACAGCACTCACTGTGGTCTGCCTTCTGGGGAAGCTGTACGTGGCCAACGCTGGGGACAGCAGGGCCATAATCATCAGAAACGGAGAAATCATCCCCATGTCTTCGGAGTTCACCCCTGAGACCGAGCGCCAGCGACTGCAGTACCTGGCATTCATGCAGCCTCACTTGCTGGGAAATGAGTTCACACATTTGGAGTTTCCAAGGAGAGTACAGAGGAAGGAACTTGGAAAGAAGATGCTCTACAGGGATTTTAATATGACAGGCTGGGCATACAAAACCATTGAGGATGATGACTTGAAGTTTCCCCTTATATATGGAGAAGGCAAGAAGGCCCGTGTAATGGCAACTATTGGAGTGACCAGGGGACTTGGGGACCATGACCTGAAGGTGCATGACTCCAACATCTACATAAAACCATTCCTGTCTTCAGCTCCAGAGGTAAGAGTCTACGATCTCTCCAAATACGAGCATGGAGCAGATGATGTGCTGATCTTGGCCACTGATGGACTCTGGGATGTTTTATCAAATGAAGAAGTGGCAGAAGCAATCACTCAGTTTCTCCCTAACTGTGATCCAGATGACCCTCACAGGTACACGCTGGCAGCTCAGGACCTGGTGATGCGTGCCCGCGGTGTCCTGAAGGACAGAGGATGGCGGATATCCAATGACCGACTGGGCTCAGGAGACGACATTTCTGTATACGTCATTCCTTTAATACATGGAAACAAACTGTCATGAAAACAGCCCAGGGTTTTGGAAGGACAGGAGGGATGAAAGCTGGGATGCCTCTGGGCAGGGCTGGGTTGGGGAGTGCCCCAGCACAGTTCCAAGTGATGCCACCCCTTCCCAGCCCAGGTGGGGAGCTTGCTGCTGAAAGGCCTCTAGCTGAGCTTCAGGACGACCCTTGGGTTTCAGTTTCCTCTTTAAAAACAGGTCTGGATACACGAAAGAGCAAAACATAAAGGCTGCTACTGAGTGTTGTGTTTCTTTTTGGTTCCTTTCGTAGGCCTCCTAGGTGGCCATGGCCCATCTCGGGGGCACCTACGTCATATTTATTTTATCTGCAGTAGCTGGGGCAGCCACTTTCGGGTGGTCACTGGCAGAAGACTCCTCAGCCCACCCAGCTGCCAACCTTTCTACGGGTTAACAGTGCTGCATTGGAGTGCTGGGGATCACGCCTCAGAAGATGGACGCGCCCATCTTCTCGTAAGCCTGAGATGTCTTTCAGGGAACACTATCTGTGTGTCTATGTGTCTTTATTCGTTTTTGGTAATGGTGGGGTGCGGCAGGGATGTTTTTCTGATAGTCCTTGAATCTTAATTGTTTCCCTTCCATAGAACAGACCTGGGACTTTCCAGGCCCCTGCTGAGGAATCTGTGTGTCCAAGTCTGGCTCGGACCGTCCCCACATCCTGTAGCCTACACCGCCCAGACAGCCATCTGGAGCTGTGCCCTGGCTGACAGAGTTCAATCTTTGTTATGTAACAGTTTGTTCCTGAGTTGGTCTTTCTCACCAAATCAATGTGCTTTCATGAAAATATGAGTATTTCTTTGGACCAGTGGTTCCTCTGTCATCTTCATGGGTCCCCCTGGTATGGTTTTTGGTTTCTCTCTGAGAGCCTGGGTGTTCATTTCTGGATTGGTTGGCCCTCCCCCCACCCGCTGGGCCATAAGGATACACACGAAGCAGTGTTGAATCGAGTGGTGTAGACATTCCTTATGTCAATCAGCTCACCACACCTCACTGGAGGATCATTCCTCCACCTAGATCCCAGGTTCTGAGGGTGGGGGCTGTCTCCAAGCCCACGTCAAATAATGTGTTAAGGATCAATAGCAGCAGTCTTATTAGCTTCACCATCATATTTGGGCAAGACCCACTCAGAATGGCCATGTAATAAAAGTGCATTTGAATCGGGTTGACTGGTCCTCATCAGGCCGTGTGCCCTGTTCCTTCTCCATGGAAGCATGTCCCAGCCCCCCAGGTACCGAGACCTCTTCCCTCTCCCTCCACCTCTAGGTGTTCCTCACAAGAGCAGCATTGGACAGATCAGATCTACCTGCTGCTTCTCTGCCGGGAGGACTCACAAAAGAGTTCTAGGAATCATTTCTATCTCTAAGGCAGATGGCTTCTCGGTATGGGTCCAGTCACCAAGTCTTCTTCCTGTAGACCATAGACCTCCTGAGGTAGCATCACCATCTTGGCTACTTTTTGTAATAAAAACATGCTCCCTCCAACACCATTAAAGAAAAAAAGTCATTGCTGTTATTCCCCCAGAAGGCTGGAGAGTCCGTTCCACTTCCTGTGTGTTCGAATCCCTTCCCCAGAGCACGAAGATAGTTTCCCCAAAGGGAAAGATAACTTTCCTCTGGGATAATCACCTGCATTTACATTCCTAGAATGTAAATATCCTCTGAGGAATGGCCTGGAGCCTTCCTACTTAGAAACGTGTTCATCCCACAGTGTGGAAACAATGCCTGGTCTTGTGGGTGAAGTGTTGTGGGAATTTACCCACCAAGTGTTTGCCAAAACGTTGCCTGGGAAGAACTGGACCGACTTTTCCTTTGTCAGGAGACATCTTCATCTCATGGCTTCCGTCCTCCTTTAGTAAACCTTAGCCACCCCCAGGGACAGCTCTATGGGGAGAAGTCTGTGATAGACAGCCTGCTGCTCTCGGGAAATGTGCAGGCATCCTGCAGCAGAGTGGTCCACTTTCTGTTGCTGCGCTGACTCTCAAAACCATGTACAAATTCGGAAACTTGAGGAAGTTTTCCATGGAGGACTCTGAGCCACCTTCTTTGGGAAGATTCCTCACAAGCTGTCGCCTCTTCCCTGTGTTCCCATTGCCCTTCATTTATTTCCTGTGCTGCTATTTTATTCAAGGCACTAGAGTCAGAGTTTGGATGTGCATTATCATATAGATGTCATAATAATGTTCCACTTCACTCTCCATTTCATTTCCTGCCAAGGCATGTCTGGGCAAAAATCTCTGGAACCTCCTTGTTCAATTTATCCTGAAGTCTTGAGCATTTAGTCCCACCAGATTTAGTTAGAAAGGTATCTAGGAATTCTCTTTATAAGACCCCCTTGGATGGAAGGATCTTGGTAACAAGCTGATGCCATGTGTCTGTTTGGGGATGGGAGGGAAACCACAAGAGATGAATCAGATGTGGGGAAACATGATTTGTTAATGCCTGTGGCAGGTCTGCCCAGCATGGATGCTCTGTGAGTTGAGCCTCCTCCATTTCAGCCTTATTTTTCACCCAGGCTCTGGATCATCCCATCCCCGAGTACTACCTGTGTCTACAAATCAGTTGGCCCTTGGAGCATTCCTGGGAAGGTCAAATGGCAACACCAAATTCTGCAGAACATATTTATACGTGGTTCTCTTATCTTGCCTGTCTTGTGTATCAATCCTGTTTGCTTGCCCTGGTGGCCTCAGAGGAAGTTTTGCTTAATGAAAAGCTTTTGATTTCCCATTTGTCTTTATGGCTGTCTGGGGGTTTGGTGGGGTGGCCACTTTCTTTCATGAAAGGCTGTCTCAGTTCTGAATCTGCTTGTTGGGCTGCCTCTGCTCTTCTGAACATTTGGTGACAGTCTTCCTTAAAGACCACCAACTCACGCTCCATCCACACTGGTGTTTTGTCAGGCAACAACGAAACTTGTATTCTCCCTACACCGAAATCAGAGCAGTGCGAGCAGCCTTAAGACTGGGGGGCATGTTCTCCTGTGGTTGTGCCTGCCTAAACACTCTTAGGGAGGGAGTAGAGAAGTGAAAACTGGGCAAGGCCAAGTAATCCTCTAATGGGACAAAGCCCCCAAAGTGGGGATTGTTATTTTCCACTGTTTACAGCTTTGGGGAATTGGGGTTTTTAATTTTTTTTAATCCCTAGCAGTTTACCCCGTAACATGGGGCTGCATGAAATCAGCTGTGCTATTTTTTTTTTAATTCTTCTCAGTGTTCATTTACTCCTTGGAAAGAATCACAGCTGTCAGTAGATACTGGTGGACAGAGATGAGAGTCCCAGATCTAGAGTTGGCCTCAGATGTTGGCCATTCCGGCAGGTTTGTAGAAACACTTGGGGGAAAAAAACCTCCCACATCTTTACGACTCTGGTCTAACATCCTTGCTCATCTGCCAATCAACTTTATTTCAAAGGTCAGTGGTTTTCTTTACACCACCGTCTGAGGATCTTACCTTCCCTTAAGTGACCCGGCAGCTCCAGTTTTCAGACTGAACATGTTAAGCTTTAATGAGATTCTATTTTGGTAAGTTCATGCTACTGGGACATATGGAAAAAAGCAGTGAGAGTCACTGTCTATGCAAAAAATCCACCAGGTTGACTCTAGAAGGTAGCAGATCTAGGATGACAGTGAAACAGTATCTGGCCACCTGACGGAATTTTACATTAGGAATCTGCATTTTTGAGGACTTTGAATTGCAGAGACAGGTTGCAGCCTGCACTCCCTAGACCCCCCACCCCCTTCCCACCCCAGCACACTTCGGTCCCGTGTGGGTGATGTGGCTTACGTGTGTACACTGGGATTTTTCAAAGGACACTACATGAGCAGCCCCACTTGCCTCTTCTGTAAGCACCATGGTGCCCTTTGTGATCTGAGTGCCAGACAAGGGAAGTGCTGCTCTTTCTAACCCACGATGTGATTTGTGTAAATAGCTTTAATTTTGCCTTGGTGTCTTAGATGAAGTTTTGTTTCTGTAGCGACCAGGTAGACAGAGACCAAATGAGGCTGTAAATGTGATGTTTTCTACTGTGATGTACTTGAAGGAGAATCTCGTGTCCTCCAATTTTCCATAGTATTTTGTGTTTGGGGAGTCCTGAGGTTACTCTTTGTTTCCTTTTTTGCCTCCATTTTCTTTATTTCTTCTGGAAACCCAGGGAGGCCCCCAGTGGAGATCATTTGTAAGGAATGTATCATGGTCTGGGTTTCCAAGAAAATACCCTACGTACAGAGAAATAAGAAGAATATGCCTGAAAATGGTTTCAGCACCATGTAACCTTTATGCTTTGTGATTGTGAAACCTTGACTTTTGTAACCCAAAAATGAAACCTGTTTAGTAAAGGGGATCTATTTTGTGTGTTTTGAAACTTAGGTGCAATGTTCCCTGGAAAAAGCTAAAGAAATGTATATGCTCAATGCCGTTTTAAAATAAAATATTATATATATATGTATATAGGATACCTTTAGCA EMBV3_35372 AACCAGCCTTTGTGCTGAGGCAGACCACTTTTCTAACACGCAGATGTCCCTGGTTCCGTG Gene GeneID:281201|GNB1:NM_175777:16_cdna UTR3_Alt 2 NULL GeneID:281201 16 GENE GNB1 MGC129044 guanine nucleotide binding protein (G protein), beta polypeptide 1 EMBV3_33134 ATGGGATCCATGGTCTATTTATTCTCCCCCTGCTCCCCTGCAACTCAGACATTATCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04258 GCCCTCCCCCCGGGCCCGCCCCAGTTGAAGATATTTTCCAAGTATGGCAAAGTTGTAAAG Variant GeneID:504536|ZCRB1:NM_001025318:18_cdna 173^258 1 EMBV3_00868 GeneID:504536 5 GENE ZCRB1 MADP-1 zinc finger CCHC-type and RNA binding motif 1 EMBV3_00814 TTATTGCCCTGTTTGGGATGTGGTTGGGTCCTAAGGTGCTGGAGCAGAAACCCTGATGGT Gene BVT0102_128980 - 1 EMBV3_35536 GK000029.2:8539178-8669605 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18690 GACAAATTATCCTTCCAGGTGGTCAAGGTGTTGCGGGTGCAGATGCAGGTCACAGATCGT Gene GeneID:617395|CST8:XM_002692165:66_cdna Constitutive 0 NULL GeneID:617395 13 GENE CST8 NULL cystatin 8 (cystatin-related epididymal specific) EMBV3_39496 TGTGAAGGAAGATGATTTGAAAACCAAGAAGGGGAGGGCGTGTGTCTGAGCTGGAGAGTG Gene GeneID:786583|LOC786583:XR_083905:650_cdna Constitutive 0 NULL GeneID:786583 17 PSEUDO LOC786583 NULL similar to coiled-coil domain containing 64 EMBV3_36590 GGCCCTGAAGGTGGGCATTTTCGTGAACATTGTCATAACACTCTGCTTCGAGAGCCTTCC Gene GeneID:100336964|LOC100336964:XM_002698096:130_cdna Constitutive 0 NULL GeneID:100336964 25 GENE LOC100336964 NULL hypothetical protein LOC100336964 EMBV3_03519 CTTGCAGTGATATGAATCTGCTCATGTGAAGACTGGCTATAAAATGAAAATTGTACTCTG Gene GeneID:540892|DNM1L:NM_001046494:26_cdna Constitutive 0 NULL GeneID:540892 5 GENE DNM1L MGC137633 dynamin 1-like EMBV3_27542 ACTCAAGTCCACAGGAGGCTTCCCCGTTGCTGTGCATGTAATGAGGTTCAGACCATGGAA Gene GeneID:538907|CCDC142:XM_002691199:143_cdna Constitutive 0 NULL GeneID:538907 11 GENE CCDC142 NULL coiled-coil domain containing 142 EMBV3_26147 GAACAAAGTGAACTGGCAGTCCTACCTGCAGAAAATCACCAGCGTGTTAGCATTTTCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09608 CAGTGAAGAGCGTCATTATTACAGTAGTTTGGTGTCCACAGCCTTGGGAGATGCCCCATG Gene GeneID:540948|N4BP1:XM_002694878:880_cdna Constitutive 0 NULL GeneID:540948 18 GENE N4BP1 NULL NEDD4 binding protein 1 EMBV3_30151 GCAAAACACTAGGGGTTATAGTTTCCTCACAAACCAAGTCTGAAGAAGGGCAGCTGTCAG Gene GeneID:617651|CCDC155:NM_001076946:418_cdna Constitutive 0 NULL GeneID:617651 18 GENE CCDC155 NULL coiled-coil domain containing 155 EMBV3_29529 TATTCAACAGTGAAAATGAGTCATACAGAGAATTACCTAAAGACCTCAGAATACAAACTT Variant GeneID:613895|C12H13orf27:NM_001076295:35_cdna 188^418 2 EMBV3_12543 GeneID:613895 12 GENE C12H13orf27 C13orf27 MGC128345 chromosome 13 open reading frame 27 ortholog EMBV3_43074 GGAACAAGTGAGACTAATGGAGACAAACAGAGTATACCAGGAGGCACTGCAACAGAGGGC Gene GeneID:516949|GBP5:NM_001075746:144_cdna Constitutive 0 NULL GeneID:516949 3 GENE GBP5 MGC142842 guanylate binding protein 5 EMBV3_27311 AGGAATTCAGCCTGCTCAAGTTGCAGACAACTTGCCTTTCTGGGTGAAGGAAAAGGCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39887 GCAAGAAGGCGGATCTTTACCTAGGCTGTGGTTCCCAGATTCTGAGTTTTAAGCACCAGG Gene GeneID:789567|LOC789567:NM_001101307:120_cdna UTR3_Alt 2 NULL GeneID:789567 15 GENE LOC789567 NULL similar to steroid dehydrogenase homolog EMBV3_05612 GTGGATCCTCTGGTTCCTCTCCGAGGCTTGGTGGGGTCGTGCTCATCTCTGGGACAGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34411 TTTCATCACCTGGAAAGGCACCCTGTACCCTTTAGCCACAGTACCTCAACCTACTTCACC Gene GeneID:518432|TEX9:NM_001099006:64_cdna Constitutive 1 NULL GeneID:518432 10 GENE TEX9 MGC165753 testis expressed 9 EMBV3_12304 TACGACAGGAATAACTAGAGTTGAAGGCTTCAAAGGTTCCTGAATTCTTCAAGAGGGAGG Gene BVV0102_146815 + 0 NULL GK000030.2:95992266-96027328 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245216 TCONS_00245217 1 XLOC_150659 NonCoding TCONS_00245217 XLOC_150659 NonCoding NonCoding LOC617166 X:95969263-95996119 = TSS184113 5084 1 TCONS_00245217_1 177 0.78324154209284 4 0.810835970955129 0.000197930746057424 6.16443919959414e-07 7.450582748113e-05 1.93624941823823e-05 2.81464195331904e-05 2.49230797379766e-05 5.98990544477476e-05 9.31012885131146e-05 8.59476513457438e-07 0.000119672978431443 3.44106105613287e-05 0.000119748321573135 1.25811617044722e-05 1.19606170127549e-07 0.000171476768901472 9.53923895839782e-05 0.000215834563493185 4.25385693037402e-06 0.000101776600955027 3.72238119353479e-05 0.000100722156154139 3.25456864313992e-05 3.60804258407122e-05 0.000166306805097221 1.28002790183723e-08 0.000351176117876958 0.000116885417965094 7.94836304988338e-05 1.13253170647424e-05 0.000170046362461938 XR_233009.1 LOC617166 PREDICTED: Bos taurus rCG38917-like (LOC617166), misc_RNA. 0.0 4011 100.00 0.437254130605822 NR_040269.1 2900056M20Rik Mus musculus RIKEN cDNA 2900056M20 gene (2900056M20Rik), transcript 0.0 789 75.42 0.226003147128245 0 noncoding 0 0 1 0 -0.142356105396548 0.408377830581408 0.00430480406175412 0.9442369883229 ATGACGATCGATCCTGGAGCCGTCGGTAGCAGTGGCGGCCTGAGACCACCCCTAGCGCTCTGGCAGGCGGGAGGGACGCATCCGGTGCATTCTCGAGATCCAGTTGCCGGCACCTGGAATCTGCTTGCGCGAGGCAGTGGCGGCACCGACGGCCCGAGGTTCCCGGTCACCAGGTTGCGGAGGATCGTGCGGGTAGCAAAAGGAAGGCGAGTGCTCCTGCGGCCCCAGACAGCAACCAGAACATGCATCATTGTTAGAACCATCACCCTGCAGCTAGCTTGGACACCATTAAAAGGGCTCATCAGCTGCAAACGGATAGAAGTATCTGATATCGTGAAGACAGTTTCAGGGCTTCTCCTTGGAGCTACATTCTCCAGAAGCCTCTGCTTGGCCTCCCTGCACCCAGCCCCACCCCATCCAGTCACAACTTGGGTCGTGTGTGGTATTTCTTGGCAACTGGAACACAGACTTCTCCAGCAGCTCCACGGGCCCCTTGTCCTCAGTGAGCAGAAGACTACAGAAGCTGGCTACTGAAGAGGCTGTCCAAGTCTTAGAGCTCCTCATTGGCCCCGCTTAGCGCAGTGCTATAACTGAGTGCTGGATGTTAGTCATTCATGCTCACCACCTTTAGGGACTGCAAAGGGATTTGTCAGACCCCATTTCACTAAGGGCCACCCTCTAAGGATCTCAACAGGAGGCTGCCCATAGAGAGAAGTGGCCTGCCTAGGGTCTCCACTGCCTTAGGTCCTGTGTGGACACTCCAGGTCTAAGGGGATTAGTATTTTTTCACCTACCTGTCATCCACTTATCAACTGGGAAATTGTCTCCTGTTATTTTTTGTTCTTGTGTTTGTTTTTTAGTAGAAAAAGTTGTATCTATTGCTTCATTTAATACAGGACTAGTCAGGATTTCTTTTTTGTCTTGAATCAATTCTGCTAAGTTATAGTTTTCTGGGAATTGGTCCATTTTGTCTGCCTTCTCAAGTTTACTGGCATAAAGTTTCCTTATTTTTTTATTTTCTGCTGTATACAATCTGTAGTTATGTCTCCTTTTTCATTGCTAATATTGGTAATTTGTGCCTTCTCACTTTTTTTCTTGATCAATCTCACCAGAGGTTTGTCTATTTTATTAGTCTTTTCAAAGAACCAGCTTTTGGCTTTGTTGCTTCTCTCTATTTTGTCTTTGTTTTCTATTTCTTTAATTTCTGCTCTTATCTTTTTTGATCTCCTTCCTTCCACATTTTTTGGATTTATTTTGTTGTTATTTTTCTAATTTCTTAAATTTGACACTGAGCTCATTAATTTTCAGCCTTTCTTGTTTTCTTATTTGCACATTTAAGGACATAACTTTCCTTCTAACTACTGCTTTTCTACAGGTTCAAACATGTCATATTTTGTTACTGTTTGGTTCCAAGTACTTCAGCATTTCCATCATGGTTACTTCTTTGACTTGCGAGTTATATAGAAGTGTGTTTCTAAATATTTGGAGATTTTAAAATTTATCTCTGTGTTACTGAAGTCTGTCTTAATTGCATTATAGTCAGAGGATGTGATCTGTGTGATTAAAAACTGATATTTATTGAGACTTGTTTTATGGCTTATTAGTGATCAATATTTTTGAATGTCTCCTATGTGCTTTATAAGACTGTATGTTCTCTAATTGTTGAATACAGAGTTCTATATAAGTCTGTTATCAAATTTGTTCATTGTATTGTTCACATTTTCTATATATAAACTGAATTTTGGATAATAATATACCAATAATTGTAAGGTATATTAATATGCAGTTATGATGGTGATTTGTTTATTTCTCCTTGTAGTTCTTTTTCCTTTATTTTTGAGAGTATTTTATTAGGAATATTCAAATTAAGAATTGTTATATATTCCTGGTAAGCATGTAATGACCCTCTCTATTCCTGATGATGCATTCTTCCTGTCTGTTTTATCTTGCATTAATATAGCAACACAAATTTTTCTTCTTGTTAGGATTTGTGTGTTATATAATTTTCCATCCTTTTACTCTTCAACATTTTCATGCCTTTATACTGTAATTATATCTCTTGGGAATAGCATATAGTTGGACCTTTTAAAAAGTCTAATCTAATGATCTCTTTTTTAATGATGATTTTAGTCTGTTTATATTTATTGTGATATATTTTGACTTGTTTCTACCACCATACTTTTTAACCTCTATTTCCTACTACCAGCCTTTTGATGCTTCATTTTTCTCTTTTTTTTTTGCCTGCTTTTATAGTTTTGAAATTTGTTTGTTTGCTTTTTTGATTAATTTTTTCCTTCCTACTCTTTGGAATTTGCCAATTTTTTTCCCATTCTTTCTGTGGTTATCCTTGAAATTTTACCATACATGTTTAACTTACAAGGTTTAAAGTTGAACAGTATTTTAACCTCCCTCTTGAAGAATTCAGGAACCTTTGAAGCCTTCAACTCTAGTTATTCCTGTCGTAACTACATGTTATTTTTTTGAGTATGTTTGTTTGTTCCTTTTTCTCCCCTAACCTCACTAATATAACATCATTAGTATATTTTACCTAGATAGTATGTGTTTGGATTTACATGCGTACATTCTTGCATCTCAGACATCATTCTGGGATCATTTTCCTTCATTATGATTACAGTGTTTAACTGCTCTTACAGTACATGTCTGTTGGTGTTAAATTCTCCTAGTCTTTATTATATGTGAATTTGTTTATTCTCATTCTTAAAACATAGTTTGTTATAGGTAATATTAGAAGTCCACTATCTGTCTAATTGCTATTTTTTCTCTTTTCTTGGGGGGTGGTTATTCAGGGGATTCTGCAGTTTCATTCTATCAGTGTTTACATATGTATTTCTTTTTTAGTATTATACTTTGGAGATGTTCTTCATGCCTCTGGGTTTATGTTTTTCATAATTTCTGGGAAATTCTCAGCCATTGTCTCTTCAAATATTGCCTGTCTTCCATTCTTTCTATATTTTCTTTCTCAGAATTCAGTTGGTCATATTTTGGACCTCCTCATTCTATCTTCCATATCTCATAATGTCTCATTGATGTTTTCTATTATCTTGTCTTCCTGAACTTCATTCTAGGCAATTTCTTCAGCTATGTCTTTCAGCTTATTGATTCTCTCTTCAACTGTGTCTGATCTGCTGTTTAATCTGTCCACTGAGTTTTTTATTTCAAGAATTATGTTTTTTCACTTATACAAACTTCATGTATTTCACTTTCTAATCTTCCCAGTCATCCCTAATCTCTTGTTGCTTGCTCATGTTTGTGATTGCATTTATTATTTCTTTAAACATTTTATACAATTATTATTCAACCAGTAATCATTGTCTCTCTAAGTATGGTGTTATAAATATTGTTCACATCCAACTACATAGTACAGTTGGATTACATATCCTCTGTTGTATGCCTTTTTGTTTTCTTAGTAACTGGATTTTTTTTTTTCTTTTGCCCAGTGTTCTAATACCATTACTAGTTCTTCTCTGATATTCTTTTAAATTTCATATCAGATCATGTCCCTCCTTTGCTCAAATTTCTCCCATAGCTCCCAGCTCCCTTAGAATAAAAGCCAAAGCCCTCACCATGGCCCAAAAGTCTTTACACAACCTGGTCCCCATCACCTCTCTGATCTTCCACTCTCCCCGTTACTCACTGTTCTCCAACCACATTGTGTTCCTTAAGCATGTCAGATACCCCCGCCCTCCCAACTTCAGAGCCTTTATACTTGCTAGTCTCACATCTAGAATATGCTTCTTCCCAGATAATCTGATGACTTACCCAGTCACTTCCAGTATGCTCAAATGTCACCTCCCTAGAGAAGCATTCCCTGACTGACATATCTAAAATAGCCCCATTCACCAGCACTTTCTATACCCTTATCCTTCTTTATGTTATATTTTTCTACAAATCACTGATGACCACCTGATACATTGTATTTATTTACTGTGATCAGTGTTTGTCTCTCCATAATAGACTGTAAACTTCACAAAGCAAGGACTCTTGTTTTGTCCATAGTTGTCTCTCTAGTGCTAAGAACAGTGCATAGTCATATTTAATAGACACTCAATAAATATTTTTGGAATAAACTGAGTGAATTAATGAATGAGTTAATGTAGAGGATAGAGGGAGAAACGCATTGAGAACTCAACTAGGCATGAAGGCCTTTCGTGCCATGCAGAGGAGCTCGAGTGTCATTGTTCAGAAGGATAGGGGCTGTAAAAAAGCAGTGAGGATAGCTTCTGGATTCTTTTGAGAAGCAGGTTCAGAGTTGATAGGGTAGTAACAAGACCCCATCTTTATGACTGGCTCTGTACCCTGGGCTCTTGAAGGTGAACCAGCCTCTTTCTCAAACAGCCCTCAGACTGCTGTGTTGTCATGCCTACCTGTTTACTTGGTGAAAACCAAAGCCGCTGCTCTCATTAGGCCTTTTGGTCCCAGCTAGGATCCTCCTTTCTCCAGCCTGTGAGAAACTGTTTCTTGGTCCCCAGGCCAAGCAGATCACCCCCATTAGACTTTTTCTGTAGTATTTAGGTTGGGGGTGGTGGTACAGCAGCTGGTATAAAGCCTGGAACATAGTAAGTGCTGTCATAATGGTGGACACTTCAGGGAGGTAAGTTTCAGTTCAGAAAATTTTTTTCCATTGTAAAGGCTACAACAGGTTGTGAGGTTTTAATCCTGGCTTTTCCCCTAACCCCCTTGTGGGCCAGCATGGCTCCAGTGTTTCTGTCTACCCATGACTGTTTAGATACTAATTCTGTTTAATGTGTGGCCTACTCCCCTGGCTTTTTGTAACCCACTGATTTCATCAGAATGCTGTCAATACACACAGGTCCCTGTGGCATGCCCCTAGAGACACCCTCTCTGGGCCAACATCAGTTCATTAATCATTGTCACACTGGTTTTAACCAGCCAACTAGTTATAAGTTCACTGCAGCAAAGTTGACTGGACACCTAGTATGTATCAGGCCTCCTGTCCCGCACTGAGGACACAGAGATGAACAGGCGTGTTCTCAGACACAGAACCGTCAACTCAGAGCAGTGGTCAGTGCAGTAATTGTGACGATACAAGAGACTGTGAGAGC EMBV3_20677 CCGCCCCGCGTCGCGGGACGCGGAGACCGGGGTCAGGAAACTGGAGCATGGCTATGAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13519 CGGTGTATGAACACCATACCCAGGACCAAGTTGCCGAGCTTCTTAAAGGAGTGGGATTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19203 GAGAGGGTCCCCCCTACTCTCTCAAAAGCATAAGCAGTGGAATCATATAGCCAGGGTACC Gene GeneID:533653|CSPG4:XM_002696673:305_cdna Constitutive 0 NULL GeneID:533653 21 GENE CSPG4 NULL chondroitin sulfate proteoglycan 4 EMBV3_16635 GTCACAAAGGGTGTGTTGGATACTGGTGGCAATCCCCTACATCTATAGCACATTCGTGTC Gene GeneID:528577|LOC528577:XM_002693655:248_cdna Constitutive 0 NULL GeneID:528577 15 GENE LOC528577 NULL similar to cOR8V11 olfactory receptor family 8 subfamily V-like EMBV3_25802 GCGGATGTGATGACTAGCGATGGGTGTGAATTGATATGTATCTACAGGACTTCCTCTTGG Gene GeneID:617142|HSF2BP:NM_001035493:81_cdna Constitutive 0 NULL GeneID:617142 1 GENE HSF2BP MGC134323 heat shock transcription factor 2 binding protein EMBV3_15181 ACCCAGTTGGCAGATGTGGTTCTCGTCGTCGCCCTCAGGAAAAAGGCACTCAAGAGCTGA Gene GeneID:617971|JMJD2D:XM_002692959:82_cdna Constitutive 0 NULL GeneID:617971 15 GENE JMJD2D NULL jumonji domain containing 2D EMBV3_32248 CAACCTTAACTATGATTTATTGGACTAGCTCCCTGTAGGAGTGGGGCTGGTGTGACAGGG Gene GeneID:512573|PNPO:NM_001014907:100_cdna Constitutive 0 NULL GeneID:512573 19 GENE PNPO NULL pyridoxamine 5'-phosphate oxidase EMBV3_39586 GCACTACGGCCTGACCTTCCGCAGACCCCGGCGGTGGTGGTGACTGACGGGGAACGCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32860 GTTTTAGAAGAGCTTTTTCCTGGACACCCGCTGTCTCTGGCGCGAACACTGGAATGCATA Gene GeneID:526256|MGAT4B:NM_001103261:28_cdna Constitutive 2 NULL GeneID:526256 7 GENE MGAT4B MGC152320 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B EMBV3_16932 CCTCTTCTAGGACCAGCCATGTGGACAAGGATAAATAAGAAGATGGGGGTGAAAGTGGGG Gene GeneID:529769|TRAIP:NM_001102124:223_cdna Constitutive 0 NULL GeneID:529769 22 GENE TRAIP MGC152635 TRAF interacting protein EMBV3_12960 TGGGCAGGACGTGGGACAGATGTGTACTCCTTACCACAGATCTCAGGCACCACAGTAATA Gene BVV0102_019046 + 1 EMBV3_09204 GK000009.2:88235143-88242874 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19481 GAAAGGCCCCTTGTCCACATCATGCTGATCCCAAACCTCCTCCCATCCCTGCTCAGTGAA Gene GeneID:616482|CAPS:NM_001076424:90_cdna Constitutive 0 NULL GeneID:616482 7 GENE CAPS MGC142635 calcyphosine EMBV3_39114 CACGTCAGAAACGAGCACCCCTACAGCCCAGACCTTCGACTGGATGAAGGTTAAGAGGAA Gene GeneID:528429|HOXB1:XM_002695911:263_cdna Constitutive 0 NULL GeneID:528429 19 GENE HOXB1 NULL homeobox B1 EMBV3_21158 GCCTTCTCTACATCTTCACCCTTGCACACATCACCACAGACCACAGAGAAAACGAAGAAG Gene BVV0102_014573 + 0 NULL GK000009.2:92209695-92245304 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238050 TCONS_00238055 TCONS_00238059 TCONS_00238052 TCONS_00238056 TCONS_00238057 TCONS_00238051 TCONS_00238058 TCONS_00238054 TCONS_00238053 1 XLOC_144875 Coding TCONS_00238052 XLOC_144875 Coding Coding IPCEF1 9:92240555-92407837 j TSS177833 7373 1 TCONS_00238052_1 436 0.10375695103757 12 0.95599619801412 0.000457064331913914 1.5916795928337e-09 2.57527087008545e-14 0.000281782650676634 1.19016822803852e-08 1.61568800473875e-05 4.34080852932347e-12 0.000101135267859598 0.000264034914052709 4.76945480420922e-05 6.42515739406007e-10 1.41387639948558e-11 8.12821308014162e-05 0.000266820275845791 5.23369549821559e-06 4.7021708852364e-07 5.87039401209121e-17 6.01098694813249e-11 0.000516748752966962 0.000529293273367581 4.25609273857857e-07 1.98717493864725e-13 1.62146769718923e-10 4.02571030937173e-08 0.000601892191840725 1.03310062437755e-07 0.000179507329750369 5.94518437989589e-05 3.54292308871427e-28 3.4776791542377e-10 XM_005211067.1 IPCEF1 PREDICTED: Bos taurus interaction protein for cytohesin exchange factors 1 (IPCEF1), transcript variant X2, mRNA. 0.0 1.320e+04 100.00 0.992404719924047 NM_001130700.1 IPCEF1 Homo sapiens interaction protein for cytohesin exchange factors 1 (IPCEF1), transcript variant 2, mRNA. 0.0 1691 79.94 0.26027397260274 TCONS_00238052_1 sp|Q8WWN9|ICEF1_HUMAN ICEF1_HUMAN Interactor protein for cytohesin exchange factors 1; 0.0 658 80.18 0.995412844036697 1 coding 0 0 0 0 -0.0205848391753337 0.93069792593983 -0.0392235336139024 0.426043089066672 TTCTGAAATCAGGGATAAAGAGCTGGTACTTGGATTTACTCTCTTTTTATTGCATATCTGAGTCAACGGAACTGGAACAAGGACCCTCATAGCTTTTTGCTTTTGTTTCTACCAATCTGATGTCATACATGGCTACTGATGGCAATGAGCTTCAGGTTCCCTTGCGTCAGAAGCAGAGAAAGAAAACTCAAGGTTTTTTCAGCATGAGTCGGAGGAGGATATCATGTAAAGACCTGGGGCATGCTGACTGCCAAGGGTGGCTCTATAAGAAAAAGGAGAAAGGAACTTTCCTAGGCAACAAATGGAAAAAGTTCTGGGTGGTCCTGAAGGGGTCGTCGCTGTACTGGTACAGCAATCAGCTGGCAGAAAAAGCTGATGGATTTGTTAACCTGCCTGATTTCACAGTAGAGAAAGCATCTGAATGCAAGAAAAAGCACGCTTTTAAGATCAGTCATCCACAGATCAAGACCTTTTATTTTGCTGCTGAGAATGTGCAGGAAATGAACCTGTGGTTAAACAAATTGGGATTAGCTGAAATCCATCCTGAATCCACTTCAAAGGATGAAGAATGCTACAGTGAGAGTGAACAGGAAGATCCTGAAATAGCGGTCCAGACGCCACCCCTTCATCACTCTGCAGAAAGTCTCTCTCCTTCGGCTGCACAGCAGGCATCTTCATCTTCACCCAAATTGAGTGAAACATCACGTTCCTTCTCTTCCATGGAAAACATAAAAAAGACTCCCAGCAGTCTGTCTTCCTCCATATCGAGAGAAAGACAGTCCTGGATTGACATGGTGAGCAGCTCATCTGCCACTGAAGATATGGGAAAGTCTGTGACATGTGCAGTGCAGTTGCTTTCACCTGCCCCCTCAGAGGCAAATGGCCGCGGGGCCCTAGAAAACAACGCTGACGCATCAGAAAGTGGATTTTTGAACTCTCTATCGAGTGATGACACTTCTTCCTTGAGTAGCAACATTGACCATCTTACCGTCCCAGATAAGCCTGCTGGATCAAAGATGACAGACAGAGAAGAGACAAAAGCCTCCGAAGATGATGAAATGGAGAAGCTCTACAAATCGTTAGAGCAAGCTAGTCTGTCTCCTCTTGGGGACCGACGACCTTCAACCAAAAAGGAGCTGAGAAAGTCCTTTGTCAAGCGGTGCAAGAATCCATCCATAAATGAGAAACTCCACAAAATACGAACTTTGAATAGCACATTAAAGTGTAAAGAACACGACCTGGCCATGATTAACCAGCTGCTGGATGATCCGAAGCTGACAGCCAGAAAATATAGGGAGTGGAAGCTCATGAACACCCTGCTGATCCAGGACATCTATCAGCAACATCAGCAGAGGCGAACCCCCACGTCTGCCTCTGAAGGCTCCCCCCAGAAACCACCTTCCTCTGCCTGCCTTGAAAATTCAATTTGAGAACCAGCCAGGATGCTCTCCCCTCCTGTCTTACCCCTCAGGCAACTCTTCAAGACGTTGCGAGAGCTTAACATTTTTCCTTGTAAAGGAAAACTGAAACCCAGTTCCTGGAAACACCAGCTCCTCCTGGAGGGATGCGGTTGGGATGGAAACAAACGATGATGCTGCCTCACCAATTCCAGTGCTCCCATCGTACTGGAGGGATGGAGTTCAGCTGAGAAAACAGTGTCTGTGTTCCTTCTGGGACCCCTGACCATGCTGGGTTCTAGGTGGGATATGCAAACCATATTTTTTGTTTCTTGTTCTCAAGAGAAGGACAGCATTCCACGGGCAAAAGATCACTTTTGACCAGGGATACTTCTTCATAGAAATATTCAGTTTCCAAAAGAAGAATGTACATATTCCATCTGGTTGGGTAGCTGAGTTCCCCAAATCACCTTTTGAGTGGAGGAATGCTTTCTACAGAGCGCCCGGAGCAGGACAGATGTGGCATCGTGGATCCCCAAATCACCTTTTGAGTGGAGGAATGCTTTCCACAGAGCACCCAGAGCAGGACAGATGTGGCATCGTGGATCCCCAAATCACCTTTTGAGTGGAGGAATGCTTTCCACAGAGCGCCCGGAGCAGCACAGATGTGGCATCGTGGAGCCCAAATCCCTTGCCTTTGACCCAGAACGCTGGTGCCTTTCCCACGTGTTGAGAAATGCTTCGTAGCAAATGCTGTATGGGAACACTCAAGAAAGAGACGTGTTCTGTATTCCACTCATTCAAAGGACAGCTTCATATTTTCACACTTTGTCTGGGTTGGGGTCGGGGACCTGATTCATGTGTCCTTTCCACGGAACAGCTAAAGACAACTCTCTCATCACACTCGGACACCTCTATTCCAACCTAAGCTTTTCTGAACCAGGATGTAGTAATACATCCAGCGAGGAATGTTTCCCGCCATGGCCCTTGGGTGCGGTAGCTATGCATGGTATAAATGTACATCCAGGGAGTTCCCTGGTGGTTCAGTGGTTAGGACTCCATGCTCGCAGTGCCGAGGGCCCAGGTTCAACCCCTGGTTGGGGAATTAAGATCCCACAAAAAGCACAACATGGCCATTAAATAAATAAATGTGTATCCGCGATCCCCAGGATCCGTATTGACAAGGTGATTCTGGTGTCTGAAATTTACTCCAAAAAAAAAAAAAAAGAGTTAAAAGATGATTGTTTTATTTTTGTATGGTTATGTGTCACTGTGTCCTATGTGAATAGCTATCTATAATATGTTTGTTATTTAAAGATATTTATAGAAGTTTAGATTACTAATGTCTTACAAGAGGCTATATACTATGGTATGTTTTGTTCAGTATATATTTCAAAGTATATACTTTTTGCTTGAGAAAAATAGAAATACTATGGGTACATTGGAGTTATGATATTGCACTATAATATCTGAGGAATGCTCAGGAAATCTTGTGGGATAAATGTAGGGCATGCATTGCTAATAATAATCTTTATTTTCTGGCTTTTCTCTCTGCTTCTGTCTCTGTCACCAGAATGCTTAGGTTTCTATCTGTTGTAAACCATTCTCCTAACCAGAAAAGGACTTTCCTTTTACATCATCCCTTCTAGTAAATACACGTTAAGGTTTATGCCATTTATGCCCACACATCCTAAATCAAATGAAGCACAACTAATGCAGTCTTCTGAAGACTATTAGGCTAATACCCTTAAAGGAAACTCATTTTATTAGAGAAACAGAGGCAAGTCTCCACTCACTAATCACCATGAATACTTCTCTCCATAAGAATAACCACATCAGAGACCCATTTCAGCCTGACCTCGAGCAAATTGTCAACACAACCTCATTGGGTTTGTAGTGTCAGAGTGTGTGGCTTGACATTCAAATGGAAATACCCACCCCCCACCTCTGAATTTTATCTGCAAACTAAATGGAAATAGTTGTTGAAATTTTCCCTAAGCTTTACTAAGAGGTCTCAATACTTTGTAAACAAAAAACAACTTTAAACCAAACAAAAAGCACGTTGTAATACTAGAAGCTTCTGAGAGATAAAGGCCAAGCTGGTCAGTGTGACCCAGTGAGCATTTAGGTGCTGTTGCCCCAGGTAGAACTGGTAACCCTGAGAGAAGGAACCATTCAGGTCCTCAGGCTGGACCCTGAAGCTTCTGGTTTGAAGCCTGGTGTTTCATCCTCTTTACTCTAGAAATTATCATTGATTCTGCCTATAATTAGCAGCATCTGATTCTTCCTGTTTCCATTGCTTCCCCATTTCCCCCTCTATTTGCCATGATGTGATGGGCCCAGACGCCATGATCTTCGTTTTTTTGGATGTTGAGTTTTAAGCCAGCTTTTTCACTCTCCCTTTTCACTTTCATCAAGAGGCTCTTTAGTTCCTCTTTGCTTTCTGCCATAAGGGTGGTGTCATCTGGGTATCTGAGGTTATTGATATTTCTCCTGGCAATCTTGATTCCAGCTTGTGCTTCATCCAGCCTGGCATTTCGCATGATGACTCTGCATATAAGTTAAATAAGCAGGATGACAATACACAGCCTTGATGTACTTCTTTCCTAGTTTGGAACCAGCCCGTTGTTTCACGTCTGGTTCTAACTGTTGCTTCTTGACCTGCATACAGGTCAAATTCTTCCTGTAATCAGAAGGTGGATTGTTCAGGGTTTGCAATGGAAACAAAGTGGTGAGAAAAGCTGAAATAATCATGGAGGAAAGGATATTATGATATATGTTCTTCTGCCTTATTTCTCTTTAGTTTCCAGCACCACCCTATAAACGTCAAACCAGTTTTCCCCAGGTGGAAGTGCTTCAACAGCTTGCAGATATATTCTAATGCTTTACTGTGATTTTTTGTTAATATACATGTAACTGACCTTTTCAAGTCCATACCGCTTGATGGAGAAGCGCTTGATACCGCTCCCGGAGAAGGCAATGGCACCCCACTCCAGTGCTCTTGCCTGGAAAATCCTATGGATGGAGGAGCCTGGAAGGCTGCAGTCCATGGGGTCGCTGAGGGTTGGACACAACTGAGCGGCTTCACTTTCATTTTTCACTTTCATGCATTGGAAAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGACGGAGCCTGGTGGGCTGCCATCTACGGGGTTGCACAGAGTCGGAGACGACTGAAGTGATTTAGCAGCAGTAGCAGGTACCACTCCAGTTTAAAGGCAAAATAGATCTGTGAGATGACTTGTCTTTCAGTTACTTTTCAAGGTGAAGTCAGTTGACACGTTTTTGCTTTGTTAGTTGAAACAGTTGCAGAACCCCCCATGAAAGTTAAAATTGAGTTGCAGGATTTTGCGCCCAGCTCTTCTAGACCAGACTCACTTGCTCACTTGTGACTTCCCTTCTGGGGATGTGTTCGCTCTGTGTTCTGCTGTGCTAGGAAGTAGTGGGGGCTGCAGCTCTGAGTTCCCACCTTCAGCTGTGGTTGAAGAGGAGGGCAAGAGAAGTAAGAAGAGGGGGGTGACTTTCTTCAGAAGTAACGCCAGTAAGTCTCTGGGCCTGAAGCCATTTTTTTCTGATCTGAGGGATACTGAGAAAATTGGATTACTTCCGATTTATTCCCGAGGACTGGACCATCTCTGAAATGGATTTGGGGCCATTTCATGTGGGTCTAAGGGGAGATTTCTACACCCATTGCTGTTTTCAAAGTTTACTGTTCCTCCCATACTGATCTGCTGCTGGGCTGGCTGTGGATTGGGGTGTAACTTATCATTCTGCTTCCTTTCCTTCCTTCTGTAAAGTACACTGCTTGTTAGGAGCTGTGAGATCCTTGGATAAAAGAGATCTGTGGTCAAGCGCTGTGGAACGGCACACCACCATGACCACTCAGGAAGTGGAGAAGCTCTGAGCATAACCGGGTCTGAACCCGCGGCACCTGGCGTGGCCTAGGATCTGGCTTGGACTCCTCTCGGGTTGTTGTGGGTCGGGGGCTGCTCCCTCCACTGTTTGCCTGGTGCGGGATGTGACGCTCTCACTGATTGGCCCACTGCAGGATCTGCTGAGTTGTGTCCCTCACATGGAGGACGTCTGTTGCTTTGAGCAATCCTTAGTTGTGTCACGGTCTCTGTGTCACACCCCAGGCCTACAGCCTTGGACAAAGACTCTAAAGCACACTATGGTGAAGACTGCAGGAAGCAAGCCTGGGCAAGCGGTTGTGCTGGAGTCAGAGGTCAAGGTGAAACGATGGTGCCTTAGATTTAAGTAGCACTTTGTAGTAGTTTGCAAATGGATGTATTTCAAGTTCCCCCTACCCCTCTGGAGGGGTCTCTGTAATATTGGGGATGGCTGTGGATTATCGTTCTTCCTTCTGGCCCAGGATGAGTGCCTTGGGGAGACCCCCACGTGGTGTGGCCAGGACGTGAGTCTCCCTCCATCTCTGCCTTGTGCAGTGGTGTGGGGACCAGCAGGTGAACTTGACTGTACGTGCCCTTGCACTGCCATGGGCACAGGGCCATGGTGGCTTCTCGGAGGTCATCCACCAAAAACCTGAGGGCCCCTGTTTCTTGAGTACAGTCTCTTCCTCGTGGCCTGAAAGTTTACCGTTCCTCCTGTACTGCTCTGCAGCTGGGCTGGCTGTGGATTGGGGCATAACTTATCATCCTGCTTCCTTTCCTTCCTTCCGTAAATTACACTGCTTGGTAGGAGCTGTGAGATCCTTGGATGAAAGAGATCTGTTTATTTTTCCTTTTTAAAATGTGTCAGGAGATACCAGACACTGAGCTTAGCGATTAAGGGTTAGGACCTTAAGTTCCTCTGAGTTCTTTTTTATGTAATTATGCTAATTTCCTCAGACAGCCTCTAAATCACAAGCAGTATCACAGAGGTGAACCAGACACTTAAAAGTCTTTTGAGGAGAGGTGCTGTACCAGTTCCAGCCATATGTAAATTTATGGACATATACCTCTTTGTATGATATTCCAATTGAAAGATAATATTTTGATGAAGTCCACAGAAGATTGAGTGAGTAATTTAGGTGCAGAAGGGGGCCACCCAATAGTCATTCTGTGTTGCAAAGCTGCCGTGTCTAAATGAAGTTTGAGGATGGATCTCCTCTTCGGTCTAATATTTGATATTTGATTGGGGTTTTCCAATTGGCTTCACCATCCAATTTTTTTTTTGAGGGGGGGAGTATAGTTATATATAAGAGAAATAGAGTCCTAGAAATGTGGAGTGACTGCCTACCTAGGGTTTTGTAATATGTCACAAAAATGGAAGCCCCCAAAACTAGATTTTAACAACTCATAGGAAATGGACTGAGGTGGATCAGTCATTCCTCTAGCACCCAGAGCTGCTGTCTCAGTGAACAAGAAAACGATCTCGTTTCTATGTGTTGTGAGACAGGAAGCCTTCTCTACATCTTCACCCTTGCACACATCACCACAGACCACAGAGAAAACGAAGAAGAAATGGATTCTACATTTTGAATAATACTTCTGTTTCTCGTGCTGTGAGAAGACTTCGCTGCCCTGTTTTGATATTTCTTTACCTTGAATCCAAAAGGGGACGCCTGCCCCAGGGAGATGATGAACATCTCATCATAAAGCCCAGGATTTTATTCCACCATGTCCTTTAATGTCCTTGCATGATGCGGATGTGACTTTTTGCACTGCATGATGTTTGGGGGCAAATGTTAATGTCAAAACGATACCTTCAATCTCATTGTACTCTCATCTCCCCTCTTGGAACAAACTGAAAAAAAAGAGGCATGACTCATTTCTCCTACTTTCTGTGTTTGAGGATGACTTTTCAGATAAAAATAAAAACAGAAGAAAATATGTCTAGTAAAATGACATGGGAAACAGTGGAAATGTTCTGTTCCTGTTCGTTTTCTGCCCTGCAATGTTGCTTGGTCAAAATAAAAGTTCCCTGGGAAGTA EMBV3_20682 GAGGCAGGCACGCCCCAGGGAGAAGCACAGGGAGAAAGGCGTACACTGTACCAGGCCTCA Variant GeneID:504640|RALY:NM_001014847:853_cdna 872^1000 1 EMBV3_14158 GeneID:504640 13 GENE RALY NULL RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) EMBV3_11721 GGTAGAAAGTCATGTGATTCCCTTTAGGTTGATGAGGCTACAGATGGTCTCCCTGCCTGC Gene GeneID:507431|ECH1:XM_002694978:152_cdna Constitutive 1 NULL GeneID:507431 18 GENE ECH1 NULL enoyl Coenzyme A hydratase 1, peroxisomal EMBV3_01797 CCTCCCACTAGGACAAAATACTGGTTTCTAAGTGGTTTTGCTTCAAAGGATACCTAGATC Gene GeneID:525962|GNB4:NM_001099033:14_cdna UTR3_Alt 2 NULL GeneID:525962 1 GENE GNB4 MGC152413 guanine nucleotide binding protein (G protein), beta polypeptide 4 EMBV3_04791 TTGGCAAGGAAAAGGGATTCTCAAGGAACCCAGAGGAGCTAGAGTTAACCACACGGCCCT Gene GeneID:616738|C2H1orf201:NM_001102304:290_cdna Constitutive 0 NULL GeneID:616738 2 GENE C2H1orf201 C1orf201 MGC152402 chromosome 1 open reading frame 201 ortholog EMBV3_05898 AAAGATGGCAATGTGCTGCTCCATGAGATGGCTGTTGTGGATTCTGTTTTGGCAGTTAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39312 TGCAGCAATGGCCGACCAGGTGGAACCCCAAAACTCAGGAAGAGTGAAGTGCTATCCTCT Gene GeneID:787458|FBN3:XM_002688838:150_cdna Constitutive 0 NULL GeneID:787458 7 GENE FBN3 NULL fibrillin 3 EMBV3_33119 TGCTCCTCGAGCTCCTCTTCGTGGTCCTGTCTGCTGGGTCAGGATTTACTCAAGGAATAA Gene GeneID:100297617|LOC100297617:XM_002698633:5_cdna Constitutive 0 NULL GeneID:100297617 27 GENE LOC100297617 NULL hypothetical protein LOC100297617 EMBV3_25567 CACAACCATCATTAGCATTAGAGTCTGCAAGAACGTCATCCTTTTCTGTTGGGTGGCAGC Gene GeneID:787401|LOC787401:XM_002687594:681_cdna Constitutive 0 NULL GeneID:787401 5 GENE LOC787401 NULL similar to olfactory receptor 781 EMBV3_20618 CATGAGGGTAGTTGAAGGACTAATGGAAAGTTGAGTGTTGTAAAGCATAAGGCTTGCTGC Gene GeneID:527574|SALL2:NM_001102112:70_cdna Constitutive 2 NULL GeneID:527574 10 GENE SALL2 MGC166009 sal-like 2 (Drosophila) EMBV3_17046 TGAAATAAAATGCCATCTCTGGAGGGAGAAAGGCACAGGCAACGCAGCTCTCCATCAGTG Gene BVT0102_315879 - 1 EMBV3_41958 GK000020.2:24292920-24440629 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27027 GAAGAGTGTACCCTAGCTCTTGGTTTGGGGGACCCTACTGTCTCAGTCAACCCAGAATAA Gene GeneID:512693|POLDIP3:NM_001103183:165_cdna Constitutive 3 NULL GeneID:512693 5 GENE POLDIP3 NULL polymerase (DNA-directed), delta interacting protein 3 EMBV3_40381 CAGGTTACAGGGTGTAAGATAGGCCACACGATGTACTTTACAACATAGGGCACAGAGCCA Gene BVT0102_058917 + 1 EMBV3_30687 GK000016.2:70890747-70902205 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38670 TTCCTGGTCGGGCTAGTCTTCTTTCTGGTGGGAATTGTCGTCCACATCAGGGCCTGGAAA Gene GeneID:282493|BOLA-DOB:NM_001013600:56_cdna Constitutive 0 NULL GeneID:282493 23 GENE BOLA-DOB DOB major histocompatibility complex, class II, DO beta EMBV3_29080 GGTTTAGTGGCAGAAATTGAAAGACTACGAGAAGAAAACAAAAGACTGCGGGCACACTTC Gene GeneID:519463|NEDD1:NM_001035333:1040_cdna UTR3_Alt 3 NULL GeneID:519463 5 GENE NEDD1 MGC128761 neural precursor cell expressed, developmentally down-regulated 1 EMBV3_33372 AGTCTCTGTCCCTGACCTGCATCTCCAAGTAGCTGGGTCTGTTCTTCCCCACAAAGGAAT Gene GeneID:100139952|GFI1:XM_002686242:280_cdna Constitutive 1 NULL GeneID:100139952 3 GENE GFI1 NULL growth factor independent 1 transcription repressor EMBV3_43718 GGAAAATGGCATTAAGGTAGACCTGCCTCAGCTAACCATTCATCAGATGCCCTGCCAGTG Gene GeneID:515729|FUCA2:XM_002690292:20_cdna Constitutive 0 NULL GeneID:515729 9 GENE FUCA2 NULL fucosidase, alpha-L- 2, plasma EMBV3_09851 GTTATTTCTGGAGAAGCCCTGGGAATCAAGGACCTGATGATGCACAGCAAAAAATAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11536 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23011 GGATCCAGTGTAGCCCAGAAAGTAATTCAAGACCAGCCAGACATATCCAGTCGAGTTGGG Gene GeneID:100298870|LOC100298870:XM_002707863:144_cdna Constitutive 0 NULL GeneID:100298870 10 GENE LOC100298870 NULL hypothetical protein LOC100298870 EMBV3_01597 TCGCCGGCGCTGTCGCTGCGGAGTGAACAGCCATGGCCAAGGACATCCTGGCTGAAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38390 TTGGTCTGGTTCATATGGCCAAATGTTATTGCATTGATAGCATTTGTTTAAAGGCTCTGG Gene GeneID:614242|RAB8B:NM_001076317:136_cdna Constitutive 2 NULL GeneID:614242 10 GENE RAB8B NULL RAB8B, member RAS oncogene family EMBV3_11292 GCGTGCTCTGTGAGATCAAGGAAAAGACAGGTCTCCAACTGGTTCGGCAACAAAAGAATT Variant GeneID:519770|PBX4:XM_002688534:130_cdna 227^798 1 EMBV3_30149 GeneID:519770 7 GENE PBX4 NULL pre-B-cell leukemia homeobox 4 EMBV3_16512 CCCAGGAGTGGGGCCTGGGCAACCCTGTGTGTTGAGGAAGGAAGGCTGGGCCCCCGCTCC Gene GeneID:100313089|MIR940:NR_031219:16_cdna Constitutive 0 NULL GeneID:100313089 25 GENE MIR940 bta-mir-940 microRNA mir-940 EMBV3_17402 TGCAGCTTCGGAGGGAGCAGCACGCGGGAGGATACTTTGATGATGCTTTGGAAGATTTCA Variant GeneID:525750|TTC32:XM_002691472:343_cdna 271^437 1 EMBV3_38291 GeneID:525750 11 GENE TTC32 NULL tetratricopeptide repeat domain 32 EMBV3_40761 CGCTGTCTTTCTGGAGCAGACTCTCTCCAGTGCTCAGGTGCTACTGATTGCTCAAGAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08189 AGAGAGTGTAAATCAGCGGCCTTGCAGACTCCTCACTTCAGTAAACCAGCAGGTGGGTGT Gene BVV0102_034571 + 0 NULL GK000008.2:1-113384836 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226688 TCONS_00226689 1 XLOC_138061 Coding TCONS_00226688 XLOC_138061 Coding Coding TSSC1 8:113001324-113093096 j TSS169420 1770 1 TCONS_00226688_8 176 7 0.980789138180907 4.89098175839375e-70 1.46556981002099e-187 1.73527588962914e-97 7.48200703193563e-162 6.86020888257285e-40 9.89345736907668e-90 1.50488250202462e-140 4.7129012716712e-148 1.27959369973137e-236 0.000203829085071552 8.28219446079459e-06 0.000254528689714018 1.28378139296972e-88 7.22791405033382e-156 7.18162381826502e-134 0.000605018907273935 0.000294507228854275 6.0364147806644e-05 1.028160381018e-81 3.88801324212329e-119 8.69795088672345e-05 1.56567843358411e-05 0.000271613862141587 5.29102117546115e-05 2.67154068894135e-262 6.12294929169395e-40 0.000813088694560083 2.15205444516524e-05 2.73340598634622e-05 1.2050436305879e-05 NM_001191328.1 TSSC1 Bos taurus tumor suppressing subtransferable candidate 1 (TSSC1), 0.0 715 100.00 0.22316384180791 NM_003310.2 TSSC1 Homo sapiens tumor suppressing subtransferable candidate 1 (TSSC1), 3e-125 453 89.31 0.194350282485876 0 coding 0 0 0 0 -0.00265403673115639 0.985672661049962 -0.00616189504137224 0.906974251622975 GTGAACCCTACGGGAACCGCGGTGGCTCAGAAAGGGTCGCCGCGCGGCGCCGCTGGGGCTGGAGCGCATGAATGGGAGCGGAGCGGGGGCGCGTCGGCCCAGGGGACCCGCCTTCAGCGAGGGCGCTGCCGCAGCATGGAGGACGACGCGCCCGTGATCTACGGCCTGGAATTCCAGGCGCGGGCCCTCACGCCTCAGACCGCGGAGACAGACGCCATTCGGTTTTTGGTTGGGACGCAGTCTCTCAAGTATGATAATCAGATCCACGTCATAGACTTTGACGACGAGAACAACATTATCAATAAAAATGTGCTCCTGCATCAGGCGGGGGAGATCTGGCACATTAGTGCCAGCCCCTCAGACAAAGGCGTGCTGGCCACCTGCTACAACAAGACCAGATCTACTGCATCGAGAGCGCTCATGGCCAGCTGGTGCGGGACCTGGACTTCAACCCCAACAAGCAGTACTACCTGGCCAGCTGCGGGGACGACTGCAAGGTGAAGTTCTGGGACACCCGCAACGTCGCCGAACCCGTCAAGACCCTGGAGGAGCACTCCCACTGGGTGTGGAACGTCCGCTACAACCACTCGCATGACCAGCTGGTCCTCACGGGCAGCAGCGACAGCAGAGTCATCCTCTCCAACATGGTGTCCATCTCCTCCGAGCCCTTCGGCCACCTGGTTGATGACGACGACCTGAGTGACCAGGAGGAGCGCCGGCTGGAGGAGAAGACAAGAAGACTCCGCTGCCCGATTTGGAGGAGGAGATGATGATGGAAGCATGATGTCTACTCAAGAAAGAAGGTCTTCTCTCCACCCCCACTTTGTCACGTTGATCACTGATGTTGGCGATTGCGGCCAAGACGGAGGACACACGTGAATTGAATCGGTCTCACTCAAACGTCAGTGTTGCACACACCCACCTGCTGGTTTACTGAAGTGAGGAGTCTGCAAGGCCGCTGATTTACACTCTCTCAAGGTCCCAGTGGGCCAGCTCCCTCCCCGGCCTCCCGGTCTCCCGACGTAGCAGACTGACTCCCATGCTGCATGAACCACTCCATGTGCAAGTCCGCACCTCTCTCCTCCTCTCCCCATCCACGGGGGAGACAGTCAACTCTCACTTACCTCTCCTGCCTGCTGCGTGTACACTGTTTCTTCTTGTTAGGAAAGAAAGAGGATTCTGACTTGCTGCCTCGGAACCACCCAAAGACCAGAAGCTGCAAGTTGGGATTCGGCCCGGGGGATGAGGTGGGGAGGTGCCGTCGACCCCACACCGTGGGACCCCTGTGAGTGTGCACGTGGCCCGAGCTCTGATGGTCCAGGCTTAGGAGAGGAGCCAGGTGGCCGCTCCTCCTGGAGACCCGCTTCCTGTCCAGCCAGCGCCAGCACACCAAAGACCAATCCTGCGGAGGAGGCCGTTCGCCTTCCTGAAGAGGAAACTGCGGAAGCGAGGACACCGACCAAGACAGCTGTTCTGAGCAGTGTGTTCGCGTGTGCGCTCTGTCCCCTCAGGAGCCACAGGAGAAGCGGGCGCCGTGGGCTCCCGGAGGAAACTGGGCCCAGGGTCCGTGTGCGGCCACGTCCATCAGATGCTCCAGCGAGGGCACCGGCCGCCTCTGTGCCCTGGGCGGACATCTCCCCGATCCCATGGGAAGGCACCCGGACGCGGCTTTCTGACTTAGACCTGAGGCTGTCGGCCCCGGTCAGGCGGGGATGGGTGCTCTGCCCACCTTGGTGTTCGGTTCCTGGGGTAGCTGACCGTCTGGGAAGA EMBV3_37566 CTCCTAGAACTCTGGGCCTTGGAAGGGAAACTGAAAGTGGACTAAGATAACAGGTAGGGC Gene BVV0102_338520 + 1 EMBV3_32266 GK000019.2:27087302-27089298 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099355 1 XLOC_059598 NonCoding TCONS_00099355 XLOC_059598 NonCoding NonCoding - 19:27087913-27088621 - TSS73731 708 0.675141242937853 1 0 0 0 0 0 0 0 0 0 0 0 3.87996690000612e-05 6.06049266885727e-05 2.02632842199473e-05 3.98643653502214e-05 6.92967165200959e-06 0.000111913216817716 0.000117247791428298 0.00131124605679615 0 0 0 5.24058556777027e-05 0 7.10365521286909e-05 0 0 0 1.3566669904678e-05 1.37135765444958e-05 2.547562466644e-05 XM_586141.6 FRK PREDICTED: Bos taurus fyn-related kinase (FRK), transcript variant 3e-12 77.0 75.45 0.148305084745763 0 noncoding 0 0 0 0 -0.0157821720562648 0.893448117284208 0.0505648896604859 0.433043582308228 CCCCCTGTTACCAAACTCAATTATAATTTTAGCTTCCCCCAAGAATGGAATCTTAAACCAGTCTATCTGGAGTTACATGGTCAGCATTAGTGAGGTAATCTGCCTGATAGACCCTTTCTGTCCCCTAAAGCAAGGTGATTTTGCCACAAAGAAATCTTTGCTGGTATAATTTCCTTGTCCCACCCCTTTCTGCCTGTAAATCTTTCATTTTGTATAGTTCTTCAGAGATCTATCTGCTGGGTGGAATGCTGCCCGATTCATGGGTCATTAAAAGCCAGTAAGAGCTTTAAAATTCAGTCCTGCTGAATTTTCTCTCTTAACACCTCCCTTTAATTTTCCAATTACCCACCTTACAAACAATACCGGTATATATGGCCCAACTGAGTTCTTGCTATATGGTAGTCTGTGAAAAAGTCCTACAAAACTGCTTTTCTAATTTAATCCTCCCAATAATCCTGTGATAACTTCTATTATTTTCCCATTTTACAGTAAAACAAACTAAGGCTCAGAGAGATAATTACTTGTCAAGATCATAAGGGCAGTAATTGGCTCTAGAGACCCTACTGATAAGCACCACTAGCCCTACCTGTTATCTTAGTCCACTTTCAGTTTCCCTTCCAAGGCCCAGAGTTCTAGGAGTAGACTTTGTCTTTTACCTCCGGATTCGGGATTCCACCACACTAAACGTGCTCTTGCACTTAGTTCCTA TCONS_00092970 . 5' 179 TCONS_00092970 . 5' 179 EMBV3_39146 CAGGTGTAGCTTACTACCAGCCCAGCCTGACTGCTGGCTACCAGTATTCTTTCCCAGAGC Variant GeneID:520897|SDR39U1:NM_001075812:173_cdna 421^894 1 EMBV3_40446 GeneID:520897 10 GENE SDR39U1 C10H14orf124 C14orf124 MGC140661 short chain dehydrogenase/reductase family 39U, member 1 EMBV3_14574 CCCCAAAACAATGAATTTCACCTTTTTCTCGGGTGCACACGGAACCTTCTCCAGGATAGA Gene BVV0102_393951 + 0 NULL GK000030.2:41445406-41554772 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00023334 TCONS_00010367 TCONS_00117178 TCONS_00244653 TCONS_00019989 TCONS_00022064 TCONS_00198662 TCONS_00166080 TCONS_00244651 TCONS_00250261 TCONS_00244654 TCONS_00056147 TCONS_00141422 TCONS_00207067 TCONS_00249913 TCONS_00135549 TCONS_00129726 TCONS_00165811 TCONS_00197449 TCONS_00249014 TCONS_00197973 TCONS_00031938 TCONS_00198626 TCONS_00198800 TCONS_00177994 TCONS_00251889 TCONS_00032586 27 XLOC_131641 XLOC_142855 XLOC_014001 XLOC_005918 XLOC_071344 XLOC_150512 XLOC_010667 XLOC_012735 XLOC_120316 XLOC_100918 XLOC_153204 XLOC_033950 XLOC_085850 XLOC_125586 XLOC_152856 XLOC_081772 XLOC_078439 XLOC_100651 XLOC_119110 XLOC_151957 XLOC_119632 XLOC_018183 XLOC_120280 XLOC_120453 XLOC_107767 XLOC_154830 XLOC_018826 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_11199 AGGTCAGCCCCGAACAGACTCCGCCACTGCTCACGGGACCAATGTTGTCAAAAGACCCTA Gene GeneID:100138150|PPP2R1B:XM_002693009:208_cdna Constitutive 0 NULL GeneID:100138150 15 GENE PPP2R1B NULL protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform EMBV3_13332 AAGTGAGCAGTAATCTCTTCCCCACCAGCCAAGGCAAACAGAGGGCTATTCCTGACTGTG Gene BVT0102_105116 - 1 EMBV3_43029 GK000019.2:18609332-18811261 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095460 TCONS_00095459 TCONS_00095461 TCONS_00095462 1 XLOC_057717 NonCoding TCONS_00095459 XLOC_057717 NonCoding NonCoding - 19:18804478-18807122 - TSS71159 1367 3 TCONS_00095459_1 104 0.0592538405267008 4 0.48429814604616 0 0 0 0 0 0 0 0 0 3.0228159436064e-22 7.23519200029179e-47 1.70695806917634e-15 0 0 0 0.00114394070217974 0 1.31506738772636e-06 0 0 0 5.49923921241388e-27 2.03007700166397e-14 1.73237420434743e-09 0 0 0 2.02588908784275e-29 3.09895205192468e-08 2.42795809916897e-05 XM_005195590.1 LOC101902881 PREDICTED: Bos taurus uncharacterized LOC101902881 (LOC101902881), 0.0 1407 100.00 0.569861009509876 0 noncoding 0 0 0 0 -0.0102756349003008 0.92216131947663 -0.0210120264718154 0.714239757551596 TTCTATCCCTGACAAGGGATCAAACCTGGGCTCCCTACTTTGGGAACCCAGAGTCATAGCCACTTCACTACCAGGGAAGGCCCACCGCGTTCCTTTAATAGCCATAATAGAACGCTCTAGCCATATTCTGAACGCACAAGTTGTGGTTCCTTCTCCCCTCCCCAGATACTTCACTGGGGAACCTGGGGAGGTGTCAGCGTGGAGAGCGTGTTCATTTCATGCCAGCTGTGCTGTGCTGCTCAGGAAGCGAGTGTAGGTCTTCAGGCATTGCATAGTGTCTTCTGTTTGTGATCTCTACAAAGATGACCTTTCCTGCAATCTCCTCTCTGGCCCTCCTGCCCTGGCCAGACCCTGTTAGGATGGTGGTTCTGAACCGAGAAGCTGGCCCCTTTGCGCCTCTTGTCTGGCCCTCGAGGCCCAGGGAGGCATCCTCCCCCTCATTGGGGTTCATCCTACAAGTCCAGATGCCGTCAGCTCCAGGGCCTCCCTCTGGGCCAGAGCTCGTCCCTCCCCACCAGCCTCCTTGGGGTGCAGATGGACGGCCCAGCACAGTCAGGAATAGCCCTCTGTTTGCCTTGGCTGGTGGGGAAGAGATTACTGCTCACTTTCTGTTTTGACTCTTATATTTAGCTAACACACAGAGCCTGTGAGATCGCAGAAAAGCAGCCTTGGGTCTTGAATGAGTCTGGGGCCCGTCCCTGATGGCCTGGCGCCTGTTGAGTGGAGGTGTCTGAAGTAGGCATGAGTGATAACACTGCCTTCTGGGTACATGGAGAGAGGACGAAGCCAACAAAAAGGAAAGAAGCAAGAAGTGGGAAAAGTATGCTGTCCAGATACCAGCCCCTGGAGGTTGAGGAGAGCATTTCCTCGATGCTCAGATTATGGATCAACCTGGGTCATTTCTCCTGGTCCAACTGTGCTGAAGCCAGATGCACCTCAGTTTTGTGGTTCAATACAGCCTTCTCTTCGTTTGAGCCAGCTCACCACAGAAGAGAGTCCTGGCTGATGCAGCTTATCCACCGCACCCTTCAGTAAGCTCCGCCCAAGAACCTCCAGGCAAAACCAACTAATGAAACTTCCATGGCCACGCAGACTCTTCAGAGCTGGTTTTGGCGGAACACCTGAGTATACCATCTCCCCAGACTGCCGGCATTCCGATTAAAAGGAACTTTGCTTTCTATCAACAACTGCTTCTTGGGTGTTGATTTCCAAGCAGCTGGACTGAGTTTGGAAACAGCAGATGAGACAGGAGGATAAATTCCTTCATCCTCCATCCCTTGGACCACTTGAGGCACATTTTCCAGATGGGGTTTGTTGTACAGTGGTTACACGTCACCTTGCTTTGCTTCCTGTTCTCCCCGACCTCC TCONS_00095463 s 3' 6489 TCONS_00095463 s 3' 4140 EMBV3_17503 GTGAGGGAGAGGACACGCCAGACCTCAGAGCAAGTCCAGCATCTCCTTCTACTAAGAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28353 GATAGGAAAAAGATTTGGCCCTTTTGACCTTGCAGCTATTCCCATTGGCGCGTATGAACC Gene GeneID:541291|NAPEPLD:NM_001015680:9_cdna Constitutive 0 NULL GeneID:541291 4 GENE NAPEPLD MGC137564 NAPE-PLD N-acyl phosphatidylethanolamine phospholipase D EMBV3_26840 GATCTGACACCATGAAGTACTAATTAAGTCTCAGGTATTGCCTGTTTCTTAACCCTGAAG Gene GeneID:616433|DPPA3:NM_001111108:67_cdna Constitutive 1 NULL GeneID:616433 5 GENE DPPA3 NULL developmental pluripotency associated 3 EMBV3_33979 TGAGCCCATCAACGTGTCCTACTGTGTCACCATCACCACCTGCAATGTCAACGAGACCAT Gene GeneID:790087|LYPD2:XM_002692566:236_cdna Constitutive 0 NULL GeneID:790087 14 GENE LYPD2 NULL LY6/PLAUR domain containing 2 EMBV3_26476 AAAAAGAGAAAGTTAAAGTAGGTTTTGTGGATGTGGCTTCAAGTAGAAATCAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_33191 AGTCAGAAAACCCAGCCACCGCCATCCCTGCATTATTGGCTTCCTTGAATAGTTGCTGCA Gene GeneID:538439|AVPR1A:NM_001104990:13_cdna Constitutive 0 NULL GeneID:538439 5 GENE AVPR1A MGC155312 arginine vasopressin receptor 1A EMBV3_23142 TTCGCCCCCTTTGTCCCAAGGAAGGAGCACTCTGAACGGGAGCTAAGTCAGCAGAGCTTG Gene GeneID:540876|ABL1:XM_002691644:356_cdna Constitutive 0 NULL GeneID:540876 11 GENE ABL1 NULL c-abl oncogene 1, receptor tyrosine kinase EMBV3_30890 TTGCCACCAATGCTCAACAGATCACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCA Gene GeneID:534003|NFYC:NM_001034598:218_cdna Constitutive 1 NULL GeneID:534003 3 GENE NFYC MGC128196 nuclear transcription factor Y, gamma EMBV3_13834 TCTCGGATTGTTTCTTCTAGTCACATGTATAAGAGTGTTCTAAGTTCTACCAACATGGGT Gene GeneID:613787|PDGFC:XM_002694441:13_cdna Constitutive 2 NULL GeneID:613787 17 GENE PDGFC NULL platelet derived growth factor C EMBV3_19663 CCTTGTGTAGTGGGTTGAATAGTGGCTGCCCAAAATTTATGTCCGAATCTCTGGACCCTG Gene BVT0102_232720 + 0 NULL GK000006.2:93488712-93528979 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05652 CCCCCAGTGCCAACCCTCTGAAACAGGGACAGAGACTACAGACTGGTCAGCTAAAATGAA Gene BVV0102_091545 + 0 NULL GK000019.2:42548335-42565343 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18370 CACAAGAGGCATTTCAGCCCATGCCCCCCTCCCATCTTATTGAAGACGAAATGATGGCCA Gene GeneID:281576|WARS:NM_174218:121_cdna Constitutive 2 NULL GeneID:281576 21 GENE WARS NULL tryptophanyl-tRNA synthetase EMBV3_35551 TGCTTCCTCAGCAACAGGAGCCGGACCTACGACATGATCCAGTACTATCAGAACGACATC Gene GeneID:282309|PI4KA:NM_174577:19_cdna Constitutive 0 NULL GeneID:282309 17 GENE PI4KA PIK4CA phosphatidylinositol 4-kinase, catalytic, alpha EMBV3_30305 GAGATTACAGGAACCCACTTGTTTCCACCTTAGGGGCCCAGCAGAGACCTGGTGTCCTAA Gene BVV0102_303923 + 0 NULL GK000021.2:28415017-28512733 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118969 1 XLOC_072785 NonCoding TCONS_00118969 XLOC_072785 NonCoding NonCoding - 21:27747501-27747983 - TSS89217 355 2 0.266112266112266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.55135125749512e-06 0 0 0 0 6.61546129125055e-06 0.000368603164312191 0 0 0 0 noncoding GCATCGGGAGAGGAGACCAACCCCACACTTCTTTCTGCCATCCCAGGAGATTACAGGAACCCACTCGTTTCCACCTTAGGGGCCCAGCAGAGACCTGGTGTCCTAACCAAGGGTCGTGCGAGCCCAGGTGCAGGGTCTGGGGAGGTGGTGTCACCTGGAGAGTGTGGAAGTGTGCCCCAGTGCAGGCTCTGGGGACTGTGTGGGTCTCACCCCATCCACGTGGGTCAGGATCCTGTGTACACGGAGACCACAGGCGGGTTGCTGCTCTGTGTTATGCTGAGTGAAAACCTTTGGTGGTGTCATATTAATATCAGCATATCCCATATCTAATCATGGGGGTCACCACTGTCTGTTG TCONS_00120869 r 5' 64390 TCONS_00120869 r 5' 64390 EMBV3_03760 GCCACTGGTTACGGTGCATACTTGGCTCAGTTTCAAATCGCCACTGTAACTGAAAAAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02890 AGGACCGATGAAGTTGCCCTGGACCGTCGTGACTGTGCGCGTGGTTTCCTTCCCTTATTA Gene BVV0102_059136 + 1 EMBV3_08807 GK000024.2:45384196-45787842 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140383 1 XLOC_085117 NonCoding TCONS_00140383 XLOC_085117 NonCoding NonCoding - 24:45517283-45524171 - TSS104794 3162 2 TCONS_00140383_1 89 0.0401644528779254 4 0.541454915057354 3.60353686424169e-05 1.49845591040511e-09 6.20600946855747e-05 4.22835271588818e-05 4.89662303602413e-34 1.18511819652748e-11 8.44296656114132e-09 0 4.30118035825618e-05 7.23155418249268e-12 1.74299628686657e-12 7.33121648243867e-12 1.97657407945075e-14 9.46534948997782e-12 4.44516048268498e-43 0 0 0 2.2698718410646e-11 1.27956797601216e-11 4.6960804853651e-09 0 0 0 1.02809190383429e-08 2.3996659647321e-09 1.59099456409839e-13 3.05502501600481e-11 9.57241210334081e-17 7.44344457056616e-11 0 noncoding 0 0 0 0 -0.0390406839292908 0.765684491780775 -0.0219442491941491 0.651179020448193 CGAAAGTGAGCCGCTGTCCCTAACTCCAGCTTAGGCGGTTAATTAGATTTGGATGGTTTCAGAGGAGCAGCTGGAGTTTTCAGAAAATGGAAGCGATAAAAAAGGGGACTATTCAAGTCTAATAAGGGAAGGAAACCACGCGCACAGTCACGACGGTCCAGGGCAACTTCATCGGTCCTGCATCGAGAGGACACGAAGTGCTCCTAGAGAAGACGAGGCCTCTCATCTCGGTGACCTGACAGGAGTAACACCGTGTGCTCTTCAGAGAGGAATAACACGCAGTGACGGGTGGGAGACACTCTTTTTCAGACCAGGAAGCTGAGCCCCTATCCTTTCACCCGTTGGAGAGGAGCCCTCGCCGGTGGTCGTGGCAGGAACCCGCGCCCGGACGTTCTGCCACGTTTAGCGTCACAGACAGAAGGAGCTGGAAGCGCTTGCCTGCCGTAATTGGCTCTCTCTAGGCTGCTGCTTTGTGAGAAGAGGCGATGCTCCCTCCCCTACACACAGTGATTGCTGGCCCAAAATAGCCCTGCACCTGCTCTAAGATGCCTGAGAGATAATTTCAGCTTCCAAGGAAACTGCCCTGATTGGTGTTGATTTTTCATGACCTCCCTTCAGGCGAACACCTGGAGATAAACACCTGATCACAGAGGCGCAACCCGCAGAGCCCAGGGCAAGGAGGAGAAGTTATTTTTAATTTTTTCTTAAACTGAAGATATGCGCAATCAACTACCTTGATTGAGGAATTACATGGCCCTCACCTGCTCACCTGTGCTGATTCACCAACTTTGCTTTATCTCCAAGGAGACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGATTACTAAACCTGTATCAGCGAGCTGGGGGCTTTCTACTTTCTAGAAGTCTCGTGAGATGTGGCAGGGTCCTAGCCTTTCACCGAGGTGGAAATTGGCTTCTTCCCCAGGGATCCTGTCAGCCCCCAAACTGGTCTCTTTGGCAGCCTGAGAACATGGGCCCAGCAGCCCCTCCTCAGGACAGCAGCAGCTTCTCCTTACTCCCCCAGTGTATCCATAGCTGCAGAGGAGGTGGGGTTGAAGAAGGGGAGAACCCAGATCCACACTCTTATTTTTCCTTCCTCTTCTAATTCCAGCACATTCCCCTGTTTAGCTCTGTTTTCTTACCATGTCCTGAGAGAAGCCAAAAAATACTGTGTCCCAAGCCACTTCCTCAGGAAAGAAGTTCTGAGATGGAGAGGAGAGTCAACCTGTCCATCCTGACCTGACCCCCAGCTGCTCCTCTAGGCTCCTGACTGTAGCATTCCCTTTCCTCACACCTGCAGCCCCAGCCTCCCCAACAGCCTGAACTATAGCCCCTGCATTTCTAGAACTGAGCAAATAACCAAAATCCATAGACTGGTGAGGGCTTCCCCATTGTTCCCTTTCTGCGTTCCAGGGCTTGGTGTGCTGTCATGGTCCAGCTGATGGCCAGGCCCCAGGCCCTGTCCTGCCAGGCTGATGGCTTTTGGCACCTGGCCCCAGGACCGGCCCTGACCTCTGCTTTCTAAACCTGAATGGCTAATCGTCTCAGTCATTTAGGGAACTTTAAAAAACATTTGCCCCAGACACCATGTGGAGATTCTCATTCAGTAGGTCTGTAATTTTGTTCAGGTTCTCAGGCTAATTCTAGTGCAGCCAGTCAGGTTTGAAGACCTTGAATCCAGACCCCTCACTTAACTGCTCTCAATTCATCTCTCAGTCTCTTTGCACCCAGACATTTTCTTTCCTCTGGCTACAGCCTTGGGGACAGGCAGCTTTCTGATCTCAAATTTGATCACTTTCCATATCCATAAGTGGTATACTATCACACTCTAGAGAATTTCTATAAATGGGATAAAAGTCTGTTGAATGGACTTTTCTGTTTAACCAGCCACGCTATACGTGACGATTGCTAAGAATATAATAATTGCAGTCATAATAGTCACCTGTAATAGGAAACAAAGCTGTTCCATACTCATTTAGTCTTAATAAAAGCTATAAAATCCACCAGTGTCATTATGTATTTTTAAACGGAGAAGACTTGGAGAAGAGAAGCGACACATGCAAGGACCTGCTCATCCTATTTTTCTGGGCGTTTTCAGTGCTGAAGATCATGGCATACTAAGCACGGAGCCCACAGAATCCTCTGACATGTCCACAGAGCCCTCACCACCTTCTGTCCAAGCCATCACAAACCCCTTTGGATGCTCACAACAGTCCCAGATGACTCCCTGTCCCAGCTATAGGCAGTCTCCACCTTGTCATCCACTCTGGCTCCTGCAGTCAGCTCCTCTCTAGCACCCTGGTTGGTGTTTACCTGTCTTGGGTCTCCTTTGTTTTCGCTGTGTTGGTTGTACTGTTCCCTGGCAGCCCAGCCTGGCCAACTCACTGGTCAGCCCGCTAGAACCCTGGGATGGAGTAGGAGCATTCAGACAATAATGCTTAGAGGTTTGGGGCTCAGGTCTGTCTGAAGCCAGGTAAACCTTGTGGAGGCCTTGACTGTGTGAGCTTGGCTTAGGAGTTTTTATTTGTATCCAAAAATACCTTCCCTCTCTATCCAACACTGGCAGCTAATAAAAAGATGGTCTCGTACTCCTGTGTGAGATTTGGATCACTGTCAGTATCATAAAAGCTGTCCTCCATTGAAGACCTACTGTGTTCCAGGCCCTGGGCTTTCTGCAAGGAAGGGGCCTGATCCTGTATAGGCCAGAGCATTTGGACTCGAGATTAATACAGAAATCCAGGAGCTTCTCTGCTCCAGACCACAGAGCTGGGAGGAAAGGAGCCTTGTCTCCACTCCACGTCTCAAAGGCAGGTCAGCCGCAAGTGTTTCTTCCATTATATGGTCTTTCTTCAGTTCCATTAATACATGGTCCGTTTAAGATAGTGTACATAAAAAAAGAGGAAGAAACACCGTGGGAGTGATCAATCACCAGCATTCTTAAGTGAAATTTTTCAGTTGATGCTTCCCAGTACACTCAGCTGAAAATCCTTTGGAGTTTTGAGAGAGGCAAACCAGAGGTAATTGGGAGGTTGTGATAACTTTGTAGATCAGCAAACCCAGTAGAGCTCACAGACAGAGGTGACTTGGTGGGCCGCATGCCATACTGATTTCTGAAAATTTCATCC TCONS_00140388 s 3' 214931 TCONS_00140388 s 3' 210524 EMBV3_18502 GTGCGTAATAAAGTCAACTGACCAAGTGACCATGAAGAGGGGCTGACTGGGGCTCCTGAT Gene GeneID:506730|MACF1:NM_001143860:86_cdna UTR3_Alt 2 NULL GeneID:506730 3 GENE MACF1 ACF7 microtubule-actin crosslinking factor 1 EMBV3_28524 ACGGTATTGGAACACGGCTGGTAGAAGACTTTTTGGCTCGATCATGTGTGAGAAGATGCC Gene GeneID:783172|BET3L:XM_002690098:91_cdna Constitutive 0 NULL GeneID:783172 9 GENE BET3L NULL BET3 like (S. cerevisiae) EMBV3_24961 GTTCGTGCTGCTGCCCAATGACATCGACGGGCTGGAGAAGATTATAGATAAAATAACTCC Gene GeneID:787106|LOC787106:XM_002697787:367_cdna Constitutive 0 NULL GeneID:787106 24 GENE LOC787106 NULL similar to serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 12 EMBV3_29241 GGAATGCTGGTCGTTCTTATCATCTGGATTGTCCCTGCTTACTTGAGCACCAAAGGCAAG Gene GeneID:100336226|LOC100336226:XM_002707769:89_cdna Constitutive 0 NULL GeneID:100336226 1 GENE LOC100336226 NULL vomeronasal 2 receptor 47-like EMBV3_39425 AGTGAGAAAACACCCCATAGGCGGAGAGGGTCTGACTCTCAAAGACAACTACAGCAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01635 ATCAGACTGCATTTACCTGCACCAGCTTCCAGATGAGGCCCCGAGTTTTGATCCTCTCTG Gene BVT0102_387547 + 0 NULL GK000023.2:9355441-9381445 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132231 TCONS_00132235 TCONS_00132237 TCONS_00132229 TCONS_00132232 TCONS_00132238 TCONS_00132234 TCONS_00132241 TCONS_00132230 TCONS_00132233 TCONS_00132239 TCONS_00132236 TCONS_00132240 1 XLOC_080733 Coding TCONS_00132238 XLOC_080733 Coding Coding - 23:9372801-9379416 - TSS98975 543 1 TCONS_00132238_2 83 3 0.918355004535833 0.0817251896416257 0.0912858595829917 0.0501052724622091 0.0422819500466039 0.0440507374519979 0.0168347034879395 0.0467669330101928 0.0630390918984371 0.0196734242949622 0.00113523699008573 0.000334370116420249 0.000128097429167635 0.00113347400615628 0.00218044563256304 0.0061079707489719 0 0 0 0.0784668147827034 0.0736789694690885 0.0332172582376921 0.000860855261908654 0 0 0.122824942719618 0.0378900028742215 0.0660108389203573 0.000105971711241645 7.01054050386123e-05 2.15351224899009e-05 0 coding 1 1 1 0 1.40112256247647 0.0279753693726629 -0.577382727184436 0.00425849786657874 GGCAAAGGCCCCCAGGAGAGATTCAATGCCGGTTCTTCATGCGGGGGAATGGCCGCTGCCCTTTCAAATCAGACTGCATTTACCTGCACCAGCTTCCAGATGAGGCCCCGAGTTTTGATCCTCTCTGGCCTGAGAGTATGCAGCTGGCCTCTGTGGGGGGCACACCAGTGTTCCTAGGGGGCACCGAGCCAGACGAGGGAGTGTTCTTCATGGACCGTGCCCTGGGCGTGGCTTTCTGGGGTTCAGAACTCCTCCTGGACCCCAATAGTTCTTACAAGTGCCTGCTATAACCAGGATCAATGTGTGGGGGATGGGGCCGAGGGGCAGGGGTTGCCAGGTAGTAGGTATTTCCCCTTTTGGGGCTTGGTAAGGGACGAAAGTAGCAAGCCTTCTACCCTCATGAACTGCAGGAGTGACACAGCTGGGGAACGAAGCGAGGGGGTAGGGTTCTCAATGTCTTGGCAGGGACTTGGTTTTTAACTTTGCTCTTTTGTAAAAGGATTCTGAAGGAAACCAATAAAATGTACCTAAACCATCACTCCT TCONS_00132242 TCONS_00132243 TCONS_00132244 TCONS_00132245 TCONS_00132246 s 5' 2030 TCONS_00132242 TCONS_00132243 TCONS_00132244 TCONS_00132245 TCONS_00132246 s 5' 8644 EMBV3_37520 CTGAATGGGGAGTGGGCGGGAAACCCCTCTATATGATTCAGAAAACTGTGGAGTAAGAGG Gene BVV0102_100440 + 0 NULL GK000025.2:18732983-18741224 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146455 TCONS_00146456 1 XLOC_089107 Coding TCONS_00146455 XLOC_089107 Coding Coding DCUN1D3 25:18736903-18797374 = TSS109488 7194 1 TCONS_00146455_3 304 0.0879899916597164 3 0.881081528030428 5.47386834409802e-05 2.70010175322856e-05 8.22578153231174e-05 2.36288696415501e-05 5.71311028297934e-06 4.06811427004674e-07 6.54035588735049e-05 4.35219366577925e-05 0.000354169153050211 0.000391008154117695 1.18906484182379e-08 5.56850699476555e-05 1.60698951943872e-08 1.82571488751418e-08 2.66274079917572e-06 0.00329907699933319 0.00125309989637348 0.00214125249279996 3.87260306763835e-09 4.72695612248064e-08 1.57167644951681e-08 0.00038739230569596 0.001131464890588 0.00115589734699307 1.23299978791601e-07 2.7333043993189e-08 2.55470733918411e-05 0.00031126778897256 0.000141767760544773 0.000508218236315899 XM_005224701.1 DCUN1D3 PREDICTED: Bos taurus DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) (DCUN1D3), transcript variant 0.0 4809 100.00 0.370447595218237 XM_005255096.1 DCUN1D3 PREDICTED: Homo sapiens DCN1, defective in cullin neddylation 1, domain containing 3 (DCUN1D3), transcript variant X1, mRNA. 0.0 4567 81.85 0.644564915207117 TCONS_00146455_3 sp|Q5E9V1|DCNL3_BOVIN DCNL3_BOVIN DCN1-like protein 3; 0.0 627 100.00 0.996710526315789 1 coding 0 0 0 0 -0.0196371807343787 0.87871896677722 0.00574420608727103 0.931224221065249 AGAAGAGGCGGCGGCGGCGGCGGCGGAGGGGGTAGGGAACCTGGAAACGCGAGCGGGGATGGTAGGTGTTTTGGACCCGCCGGGCCGCCGTCGTTTCCAGAAAGGGTTTGACTGGAGGAACCTCTGGAGCAGCTGTTGGCTGGCTCCTCTGGCTGATGGCATGTTGAGGCACATGGGCCAGTGGCAACGAGGGCATCCAATCCAGAGAGGGCCGCTCTAGAGGCCAGGCCACCAGCATCATGGGCCAGTGTGTCACCAAGTGTAAGAATCCCTCATCAACTCTGGGTAGCAAGAATGGAGACCGTGATCCCAGCAGCAAGTCACATGGTAGGCGGAGTGCAAGCCACCGTGAGGAACAGCTGCCAACCTGTGGCAAGCCAGGTGGAGATATCCTTGTCAATGGGACCAAAAAGGCAGAGGCTGCTCCTGAGGCCTGCCAGCTGCCAACATCCTCTGGAGATGCTGGGAGGGAGCCCAAGTCAAATGCCGAGGAGTCGTCTTTGCAGAGGTTGGAAGAACTGTTCAGGCGCTATAAGGATGAACGGGAGGATGCAATTTTGGAGGAAGGCATGGAGCGCTTTTGCAATGATCTATGTGTGGACCCCACGGAATTTCGAGTGCTGCTTTTGGCTTGGAAGTTCCAGGCTGCTACCATGTGCAAATTCACCAGGAAGGAATTTTTTGACGGCTGCAAAGCAATAAGTGCAGACAGCATTGATGGGATCTGTGCACGGTTCCCTAGCCTCTTAACAGAAGCCAAACAAGAGGATAAATTCAAGGATCTCTACCGGTTTACATTTCAGTTTGGCCTGGACTCTGAAGAAGGGCAGCGGTCACTGCATCGAGAAATAGCCATTGCCCTGTGGAAACTCGTCTTTACCCAGAACAATCCTCCGGTATTGGACCAGTGGCTAAACTTCCTAACAGAGAACCCCTCGGGGATCAAGGGCATCTCCAGGGACACTTGGAATATGTTCCTTAACTTCACTCAGGTGATTGGCCCTGACCTCAGCAACTACAGCGAAGATGAGGCCTGGCCAAGTCTCTTCGATACCTTTGTGGAGTGGGAAATGGAGCGAAGGAAAAGAGAAGGGGAAGGGAGAGGCGCACTCAGCTCAGGGCCCGAGGGCTTGTGTCCCGAGGAGCAGACTTAGTGGCTCTGTCTCAGGAGCAGCAGCAAGGATCTGCCTGCTGCCCTGCAGTCAACCAAGGAATTGGACCTTTCTGAAAATTACTGAAGATCCGGATATTTTCTACTTTACACCTTTCTCTGCCTTGTATCTGAAAGGGCTCTAAAATGCTGTATCATGTTTTAGGCACTTTCTTCACTTTTGGTTATTTTGGTTATTTCCCTTTTTTGGGGAGGGGTCCCCCAAAATATTTGAACCTGGCTACATGTTGTATATCTTTTTTTTTTTTTTGAAGCCTTCAGATAGAATAAGCCTGCCACTTCTTGCACAAATTAGATTTTTTTTTTTTTGGTGGGGGAGGGTGTAGAGCAGGTAGTAGGAATGGGAGTTAGGTTGAATTATCATTATAAAATGATAGTGCCAGATCTCAGTTTTGCATATTCTTGTTTTTCAGGGCAGGTCTGTACTGTGTGTAGTGCTGTTTACATGGTTGGATTTAGGTTGTAATAATTACTTTTAAAGATTTACAGAGTTGAATTTTGAATTAGCAGTGTTAACTGTTAACCACATTGCATTAATTCCCAGGCGATTTAAGGTTCTTGGAGAGCCAGGGCTGGCCAAGAGCATTTGTAGTCTGGTGACGACCCCCTTTTAAGCTAATTTATCTGAAACTCTTTATTTTTCTCACTTCTTGCTCATTCCTTCTTTGACCTATTGCATTTCATGTTGAGTTTATCCATCAACATGCTGCGCCTGTCAGTCAAGTGAGCAGTTTTGTTAGAACACATTGTACTGAGAACCACTTAAGCATTGAATGCAGAGAAAGCAGCGCTACCTCAGTTTTGCTGGAAGTAGACTTTGATAGTTTTCTTTCTTTGATGAATTTTCTGTATTTTCATGTTGTAAGTGGAAATACGTTTTGTTTTTTTTTTTCATTTGCTTTGGAGCCAAAGTTTCTGTTCCTGGTGGTCGGAAAACTGTGCCTGCCGGCCAACTGACTTGAAGGAAAACTGTGGTATGGAGCTCTGCTTGAATTTTTTTTTTTTTTTTTTTTCTTGAGTATCATCAGCTTACTTGTCTGGCAAGTGCAGGAGCCTGGGGTTGACCTGAACTCTGCCAAACAAATACATAAGTGTATTTAATAGTTAAACTTGTGCCCTTTCCCTTCTTGCTGCACCCGTGTTGTCACTTAACCCCCAGAAGTTATTTATTTTCTTCTTTGTTAATGTCAGGCTTATTTGGGGTAATGTGATGACTATTTAGGTTTACATGACCCTCCTCACCTTTTCCTACCCCCAAATATGTATATATACATATATATGTATATATTTTACCTATATAATATATATATATATATACACATATATGTATCTATATTCCTTTGTTTCTTTGCCTGCTAAAACTAGCTATAAAAGGGAGCTGCCTTCAATATACAAAGTATAAGAGTGTCAGGGAGAATCATAATGAAGGCTTTTGAATCTGAATTTAGATCATTTTCATTAAAGATGAATTTTCTCAGTCCTTTCCTCACAAGAGGGAGTCCCAGTTCCCTAGACACCTCCACTGCTTGCTCTGTAAGGCCAGCTTTGGCTAAACTGCCACACAGAAGCTGACTGGTCCTACCTGGTTTTAGTAGAGGGTCCTCTTATTTTTCCATTAAAAAAAAAAAATGTCCTCGTAAAACTGTACTGGAAGGATGGATGGCAGGAACTTGTACCGTTCAGCTTCCAATACTTTGGAACAGATTGAAAAGGGAATTTTTAAATAAAAATTTATAAAAATATTTATACTCTTGAGGCAGTGAGAGTTTGTCTATTAAATATTTGGAGTTTTTCTCCCTCAACTTACCCCCCATCTCCCTCCCAGGTATATGTTTCTTAGCCTGGGCAGGAATTGCTTATTTTGAGTTCTTTTATTACTAACCTATGGCTCTGGGCTCCCATCTTTACAAAGATGATTTAAGGAGTTTCTGCAATGTTTTTGTAAAATTGGTATTGACATAGGGAACATATATATATATTTTTTAATCTGAACCCTGAGAGTTGCCCCTTTTACAGGGCTGGATGGGAAACTAAAGTCAGCCACAGTAGTTAACAATACTGCTGGAAAGCTGATGGGTCCCAGTCCAGATATCTGGCTTTGTTCTAGCCTAAGACACAGGAACCTTGTAGACAGTTTCTGAGGGTCTTAGCATGTTCTGTGGGCTCAGTTGAAGTCAAGGTACCTAGGCTGAGGTATTGAGACTGCCATCTCATCCAGTCAATTTACAACCCCATTTTTCCTCAGTTCTGGATTGGGCAGAGGTTAAGGTTGAAACCTTAACCTAGCAAGCTGCTTCTAGCCAGGTAAGGCTTTTTCTGTCTCAGATCAGAAGGGTGTATGGCAAGGACACAAAATGCTGAGTATCCTAAAGACTCTGGGGGAACTGGATTCCTTCCCCAGCCTATAAGAAAGCATTCCATGCATTAGGTGTGTTATGATGGATTTTTAAAAAAACACTCAGCTTCCTTATCAACAAAAGAGCCATTTAAATATTTTTGGTTATATATTTAATGGTCTGTTTGTTAACAAATGCAAATTAGAAACCTGAAAAGGGAATGGTTAGGGAGGGACTTAGTTTCCTTCCAAGTTTGAGTCTTTGATGCAAGGAATTCAAGCTTAAGCAGTCACGTGGACCAATGCTTGACTTTTTCGTGGCTATAGGAAAAGCAGTTTTCTGCAGAGGGATCCAAGATGGGAGTGTGTGTGTGTGTAGGGTTTGCAGTTACACTTCTGGGAAATGAGAGGTTCCTGTTCCTCTTCACCTACAGATGGGTTTGCTGCTTAATGAGTGAGCAGTAATTGTGTTGAAGAGGTCAATGCATGCCCCTCAGGTAAGCCAGTGCACACTTCACTTTAAACAATAGGATACCAGAGTGGTATGGTGGTGGTGTGGTCAGGGGCAGGATGTGGATGCCATTTTGAAAACAGGCAAATACCAGAGTGACTACAACAAACGGAGTGTGTTGGGAGGTTGTTTTTTGGCAGCAGTTTTGTGTGTGAGCTTCTATGGTATTTCTTTAGCAATTGATTAGAAAGCAATATGAGATGAATTGTGCTTTACCGGTTGCTCTTCCCCTGTACCTGCCAAATGTGACTGTATCACTCTTACCCCTGCCTCCTGTGATGACACTTTGCTGTACTTAGGCTAGTTGTCTCAGCAGTTCTCCCTGCCACATGTGCTCACGTGTGAGTTTGGGTCAAGATTCCATTTCTACCCTTCTGGTAAGAAAAAAAAGTCTAGAGCTACGTAGAGATCCAAATTTCAGCCAAGCCCTCAGGTTCAAGGAAATCCAACAGAAAATGTACAAGGCAGTGTTTTCAATATTAAACTTTGCTAAGGAAGGCACAAACTAGCCTTCCTGGAGAGGAAGAAAGGATTAAGCCTCACATTTATTAGTGGGTCTTAAAACAGTATGGATTTCCCAAGGACTGGTGGTAAAATTCGGTCCTCAGTGTTGGAGCCTGCAGGGTGTGGGACTCCATAGTTCATGTGATGGCTGCAATATAGTATACTATACCAAACTGTATTAAATAGTGATGGGAAATTACTTAGATAAGGATCTGGTATAAAAGTTTAACCAGACAAACCAAAACATCTGTGTTTTGGGCCAAGTTTGGTTTGCATTTAAAGTCAAGTCTTCAGTGCAGTGAGCCCCAAAGGTATAAAGGCTGGAAGAAAGCTGCTGCTAGGTTTGTTTTGCTGTAGTAGCCCACTTTGCCACTCTTCTTGTGTGTCTGGTTAGTGATGACCTGAACATCTTGTTAACTGCGTAACTGACAAAGGTCTTCCCTGGGGGACTCAGCAGTATCTTGTTTAAATGTGTGCGTGTGTGCTAATTGACTTCAGTCATATCCGACTCTGTGTGGCCCTGTGGACTATAGCCAGCCAGGCTCTTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCTCTCATCCAGGAGATCTTCCCAACCCAGGGATTGAACCAGCGTCTCTTATGTCTCCTGCATTGGCAGGTGGATTCTTTACCACTAGCACTACCTGGGAAGCTTTTGTTTAAACAAGATGGACTAAAAGGACTATTAAGTCATTAAAGTGTTAATTGGGACTCATTTGAGAACATGTAACATTGATCCTCCTCTTACTCCACAGTTTTCTGAATCATATAGAGGGGTTTCCCGCCCACTCCCCATTCAGAGTTTACACCTTTTTAAGCTGTAATCATTAGCATTTATCCAGGTTAACCTTGACTAGCACTGCCTTACATTGAGGATCTGCAGGTGTTTTTCCTCACTGAAAAACAAAATTGAGTAACCATCAGATTCTGTTTCTGATTCAGGTGCTGGAGTTTATCACATCCTTCTCCCTATTCCTCTCTTTGAAAACTGAGCCTGCTCTTCTACCACCCACCTTCCCTACAACTTTCAGCATAAATCTTGCATATTGCCAAAGGAAGCCATTCAGCAGCTGCTGTGGTTTTTTCCCCCAACGCATTTATTCTGGGAGAAGTGTCTTCCTTCTGACCCTGGTCCTAGCCCCTTGAGTCTGTTATTAATTGCTCTTACCTGTTGCACTAATGAATATGATTCTAGGTTTCAAAGGAGGGATTTGAAGCAATAGGCAAATGGGGCTTGGATAAACTGGTCCTACAAATAAGATACCCTGCCTTATCCCGCTGAGGTGATGAGTCCACTGCTCATGTGACCCTCCACCTTTGTGGATTCCTCTTGGTTTGTGACCAGCGTGTCTGTTTCTTGAAGTTGTACAAACTTGTTGACAAAAGTCAATATTTTGATTTGTATTCTCTGCACTGTTGCACTCTCCAAATGGCTCCTTGAATATTTTTATTAACTTGTTACACACATTATTGTCTACTTTTTTATTTGGAAGGTAACCTGCTGTTGGACTTAATAAATTTGTTTACTTGACTAATGACAGTTCTGCAAGAAACAAAAAACAACCCCCCAAACAAAAAATATCTGTGACTTCATTCTGGGGTGAGCTTTACCCACCAGGAGCCTCTTCCAACATAATGGATGGCAGATCCTGTGCTTTGGAAAACCGTCCAGATCATACAGGATCCCCAGCTACAAAAACGGATGTTGATCTCCCACTCACCAAGCTTAACGGCTTTTCAAGTCCCAGTACTTATAGGCAAGAAGCAAATGCGTCCTCACAGGGCCACTACCTAACAGTCTTACCTTATCAACTGATGTGGATTCCCATGAAGAATAAAAAGTGAATTAGAACTCTTTAATAGTTGGCTCCTAATATCTACTAGGTTGGCAGTGATTAAGGCAAGGAGGCAAGCTGAAAACTGTCAGGTGCTACTGTTCTGTGATCTTTGGCAAATTAGTGAAATTCTGAGTTTCCTTTTAGTCATCTGTAAAATCAAGAGACTATTATTTTTATCAATGTTAGGATTTAAAAGAACATCCATGATTATTAAGCACCTAAGACACAAAAGTTTAAGGTTTCCAAAGGCTGTTAGGTAATGCAGGGAATCCAGATAATAGGAGGATTGGAATGGTCACATATGACCTTTCAAAAGTCACTGCCTTTCTTGGGGACTCAACTTCGCTATGCCATATTGGTAGGATGGTGGGCTTAGAATAACATAGTCCCTAATGGCTCCCTCTGGCTCTTACATTCTAGAAGTCTAACTGTGGTAGACGTTGTTTAGTCACTAAGTCGTGTCTGACTCTTGCGACCCCATGGACTGTAGCCTGCCAGGCCCCTCTGTCCATGGGATTTCCCAGACAAGAATACTGGAGTGGGTTGCCATTTTCTTCTCCAGCAGATATTCCCAACCCAGGGATTGAAACTGCTTCTCCTGCATTGACAGGTGGATTCTTGACCATTGAGCCATCAGGAAATCTAGGGGATGACTTTTTCCTCACTTAAAAAATGTACTTATTTTCCCAGTTGGCTCTTGAGCTTGTGTCTTCTTTGGCTGTTTGAGTTAATGAGCCCAGCCAGGGCCTTACAAATAAGAGGTATGAGAAATAATAAAGTGAAGATTACTGA EMBV3_11531 TCCCACACGTTTCTGGTTGAAAGGGTTACGTTTTTACTGCTCTAGGCTGGTGGGTGAGTG Gene BVT0102_093615 + 0 NULL GK000022.2:43741375-43864911 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28011 ATTGCATCTGACTCCAGGTCCAGTGCTCTTTCTACTCTGAGCTGCTGCTTACCAGGAAGT Gene GeneID:510026|ATP1B4:NM_001101919:7_cdna UTR3_Alt 2 NULL GeneID:510026 X GENE ATP1B4 MGC166431 ATPase, (Na+)/K+ transporting, beta 4 polypeptide EMBV3_04579 CACACAATGGCATTTTAGGCAATAACTATATTTTTAACAGGGTGACAAATTACCTGGGCC Gene GeneID:521857|TRIB1:NM_001101105:41_cdna Constitutive 2 NULL GeneID:521857 14 GENE TRIB1 NULL tribbles homolog 1 (Drosophila) EMBV3_28119 TCAGCTGCTAAGTCCTGGCCGAGCGGTTTTGTTGTACCAGCAGTTTTACATCCTCAAGAG Gene GeneID:783553|LOC783553:XM_002687653:839_cdna Constitutive 1 NULL GeneID:783553 5 GENE LOC783553 NULL hypothetical LOC783553 EMBV3_07688 CAAGAACTCCGATTACCATCTCAACAGCAGCCCTGAAATATGCACTGAGCTGGAATGCCG Gene BVV0101_035233 + 0 NULL GK000023.2:32386039-32475567 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03937 GGCCCTGTAAGTAGTGGTTCTGATTGCCATGAAACGGAAGAATTAGTAGGATCCAATTCC Gene GeneID:504900|PPP4R2:XM_002696957:98_cdna Constitutive 1 NULL GeneID:504900 22 GENE PPP4R2 NULL protein phosphatase 4, regulatory subunit 2 EMBV3_15439 GTTCACCAAGATGATGTCAGTACAACTAGTGAGATGCAGCACATCCACCCCTTGCCTCTG Gene BVT0102_350131 + 0 NULL GK000003.2:93565106-93571581 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41083 CAAAGCATTTGTGCCCCTCCTGAAGAACCCAGAACCCGAGCTTATTGATGCCTTGCGTAC Gene GeneID:767964|MGC133640:NM_001077032:86_cdna Constitutive 0 NULL GeneID:767964 X GENE MGC133640 NULL hypothetical protein MGC133640 EMBV3_14613 TACAGCAAGAAGCACTTTCGGATCTTCAGATTTTTGTATTTTTTGATCTGACTGTAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01977 GAGGAAAAGCAGTGCCCGTTTCTGCCTCAGCCCTTCTCAGTTTAACACTATGCCTGGGCT Gene GeneID:614488|AVPI1:NM_001034760:222_cdna Constitutive 0 NULL GeneID:614488 26 GENE AVPI1 MGC128018 arginine vasopressin-induced 1 EMBV3_35208 GTGGGACTGAGTCCGGCTCATGGGACTCCAAAGTTTACTGTCGTCATGCTATGTTTTCAT Gene GeneID:515354|TBCC:NM_001075709:282_cdna Constitutive 1 NULL GeneID:515354 23 GENE TBCC NULL tubulin folding cofactor C EMBV3_13804 TAACAAGCTTCCAGAACAAATTTCCTAATAATGCAGTCAGGTCGGTTTTATTCTGCCTTT Gene GeneID:614611|MOBKL1B:NM_001076338:60_cdna Constitutive 2 NULL GeneID:614611 11 GENE MOBKL1B MGC142481 MOB1, Mps One Binder kinase activator-like 1B (yeast) EMBV3_23385 AGGTCCGGCTGATGCGGAACAAATCCTCAGCACTCCCTCAACATCCTGGGCCAGAAGGTG Variant GeneID:505749|RBM10:XM_002700060:27_cdna 698^771 3 EMBV3_33403 GeneID:505749 X GENE RBM10 NULL RNA binding motif protein 10 EMBV3_23522 TGTGGTCTTCGTCACAAATGCTGGGAACATCTCACAGTGCAGTAAAGCTGAGGAGCTGTC Gene GeneID:100336845|LOC100336845:XM_002687929:154_cdna Constitutive 0 NULL GeneID:100336845 5 GENE LOC100336845 NULL CECR5 protein-like EMBV3_06563 CTGCCCCTGGACACCTACGTGCAGAGCCCGTTCTCCCTGGGGATGGTGGAGAGGTTTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02655 CTCACACCTACCCCACCTACAGCTGAAGACAGTGCACTTTACAGATACTGCCCACAAACA Gene BVV0102_386446 + 0 NULL GK000030.2:96072572-96082196 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247718 TCONS_00247719 1 XLOC_151411 Coding TCONS_00247718 XLOC_151411 Coding Coding IQSEC2 X:96081140-96124542 j TSS185445 4848 1 TCONS_00247718_6 1251 14 0.88862007787839 7.87616752362012e-05 8.69732657048682e-05 0.00022186558336524 5.17261284876713e-05 2.45428024200892e-10 1.95275648302642e-05 3.31394073071902e-05 3.85321526581515e-10 0.00037366448002439 4.28352100317135e-15 1.28756987480251e-05 2.04848536206712e-10 4.64162186547078e-12 6.95604849762415e-11 1.6073425403613e-13 4.14281812693338e-05 0 1.89351956827527e-09 8.23629548433249e-05 0.000127327512143788 7.02955159735935e-13 6.19674812954783e-06 0.000128675646614984 9.7300126467168e-13 0.000883009303697666 0.000488141397259844 2.45587127619378e-05 9.90306015158611e-06 4.37663903301121e-09 4.76313568880935e-10 XM_005200778.1 IQSEC2 PREDICTED: Bos taurus IQ motif and Sec7 domain 2 (IQSEC2), 0.0 8744 100.00 0.999793729372937 NM_001111125.2 IQSEC2 Homo sapiens IQ motif and Sec7 domain 2 (IQSEC2), transcript 0.0 6976 92.32 0.987623762376238 TCONS_00247718_6 sp|Q5DU25|IQEC2_MOUSE IQEC2_MOUSE IQ motif and SEC7 domain-containing protein 2; 0.0 2502 99.44 0.992805755395683 1 coding 0 0 0 0 -0.00382732124506073 0.980688141773921 -0.0164399853837126 0.844556773128081 GGCCAGGGGGCCTGCCCTCGGGACAGGTCCAGACCCATGGAGCCCCCCAGGAGGAGTAGCAGTGTGGAGGGTGATGCCCCAGGCAGTGACCTGAGCACAGCGGTTGATAGTCCTGGGAGCCAACCCCCCTACCGGCTGAGCCAGCTTCCCCCCACCAGCAGCCACATGGGGGGCCCCCCTGCTGGGGTGGGCCTTCCCTGGGCTCAGCGGGCGCGCCTCCAGCCAGCCAGTGTTGCCCTGAGGAAGCAGGAGGAGGAGGAGATAAAGCGCTCAAAGGCCCTGTCTGACAGCTATGAACTCTCCACGGACCTGCAGGACAAGAAGGTGGAAATGCTGGAGAGGAAGTATGGGGGCTCCTTCCTGAGCCGCAGGGCCGCCAGGACCATCCAGACGGCCTTCCGCCAGTACCGCATGAACAAGAACTTTGAGCGGCTCCGCAGCTCAGCTTCAGAGAGTCGCATGTCCCGCCGCATCATCCTTTCCAACATGCGGATGCAGTTCTCCTTTGAAGAATATGAGAAGGCACAGAACCCCGCGTACTTCGAGGGCAAGCCTGCCTCGCTGGACGAGGGTGCCATGGCTGGGGCCCGGAGCCACCGGCTTGAACGGGGGCTCCCATATGGCGGCTCCTGCGGAGGGGGCATCGATGGTGGGGGAAGCTCCGTCACCACATCTGGAGAGTTTTCTAACGACATCACGGAGCTTGAGGACTCCTTCTCCAAACAGGTAAAGTCTCTGGCTGAATCCATTGACGAGGCCTTGAACTGCCACCCATCGGGGCCCATGTCTGAGGAACCAGGGTCAGCCCAGCTGGAGAAGCGAGAGTCAAAGGAACAGCAAGAAGACAGCTCGGCCACATCCTTCAGTGACCTTCCCCTCTACTTGGATGACCCAGTTCCCCCACCATCCCCTGAACGACTGCCTAGCACAGAGCCTCCTGCCCAGGGCAGACCTGAGTTCTGGGCACCAGCCCCTCTCCCTCCAGTTCCTCCACCAGTGCCAGCAGGGTCCCGGGAAGATGGTAGCCGTGAGGAAGGCACTCGCAGGGGTCCTGGGTGCTTGGAATGTCGGGATTTCCGGCTGCGGGCTGCCCACCTGCCCCTGCTTACCATTGAACCTCCCAGTGACAGCTCCGTGGACCTGAGTGACCGCTCAGATCGCGGCTCTGTCCACCGTCAGCTCGTGTATGAGGCTGATGGCTGCAGCCCCCATGGGACCCTGAAGCACAAGGGGCCACCAGGCAGGGCCCCAATCCCACACCGCCACTACCCAGCCCCGGAGGGCCCAGCCCCAGCCCCGCCAGGGCCCCTACCACCAGCCCCCAACAGTGGCACTGGGCCCAGTGGTGTGGCTGGGGGTCGGAGGTTGGGGAAGTGCGAGGCAGCAGGCGAGAACTCTGATGGTGGAGATAATGAGAGCCTTGAGAGCTCCAGCAATTCCAACGAGACCATCAACTGCAGCTCTGGCTCCTCTTCGCGGGACAGCCTGAGGGAGCCTCCAGCCACCGGCCTGTGCAAGCAGACCTACCAGCGGGAGACCAGGCACAGCTGGGACTCGCCAGCCTTCAACAACGATGTGGTGCAGAGGCGGCACTACCGAATTGGCCTCAACTTGTTCAATAAGAAGCCAGAGAAGGGTATCCAGTATCTGATTGAGCGGGGCTTCCTGTCAGACACGCCGGTGGGAGTGGCTCACTTCATCCTGGAACGGAAAGGCCTGAGCCGGCAGATGATAGGGGAATTCCTAGGGAACCGGCAGAAGCAGTTCAACAGAGACGTGTTGGACTGTGTGGTGGATGAAATGGACTTCTCCTCCATGGATTTGGATGACGCGCTCCGGAAGTTCCAATCCCACATCCGGGTTCAGGGTGAGGCCCAGAAAGTGGAACGACTCATCGAAGCCTTCAGCCAGCGGTACTGTGTGTGTAACCCAGCCCTCGTGCGCCAGTTCCGGAATCCAGACACCATTTTCATCCTTGCTTTTGCCATCATCCTCCTCAATACTGACATGTACAGTCCCAGCGTCAAGGCTGAACGCAAGATGAAACTAGATGACTTCATCAAGAACCTGAGAGGGGTTGACAATGGTGAAGACATCCCCCGAGACCTCCTAGTGGGCATTTACCAGCGCATCCAGGGACGCGAACTGCGGACCAACGATGACCACGTGTCCCAAGTGCAGGCTGTGGAGCGCATGATTGTAGGCAAGAAACCGGTCCTATCTCTTCCTCACCGTCGACTGGTTTGCTGCTGCCAGCTCTATGAGGTGCCAGATCCAAACCGCCCACAGAGGCTAGGGTTGCACCAGCGGGAGGTCTTCCTCTTCAACGATCTCCTTGTGGTCACCAAAATTTTCCAGAAGAAGAAGATCTTGGTGACATACAGTTTCCGTCAGTCCTTTCCCCTCGTGGAAATGCACATGCAGCTCTTCCAGAATTCATATTACCAGTTTGGGATCAAGTTGCTGTCTGCAGTACCTGGTGGGGAGCGCAAAGTCCTCATCATCTTCAATGCCCCCAGCCTCCAGGATCGGCTGCGCTTCACATCTGACCTCCGAGAATCCATCGCTGAGGTGCAGGAGATGGAGAAATACCGTGTGGAGTCGGAGCTAGAAAAGCAGAAAGGTATGATGCGGCCTAACACCTCACAGCCCGGAGGGGCCAAGGACTCGGTGAACGGCACACTGGCCCGAAGCAGCCTAGAGGACACTTATGGGGCAGGCGATGGGCTCAAACGGGGTGCACTCAGCAGTTCCCTGCGAGACCTCTCAGATGCAGGGAAGCGGGGGCGGCGTAACAGCGTGGGATCGCTGGACAGCACCATCGAAGGGTCTGTTATTAGCAGTCCACGCCCTCACCAGAGGATGCCACCTCCACCCCCACCCCCGCCGCCAGAGGAGTACAAGAGCCAGAGGCCCGTCTCCAACTCCTCATCCTTCCTGGGCTCCCTATTTGGAAGCAAGCGTGGCAAGGGGCCCTTCCAGATGCCACCGCCACCAACAGGCCAGGCCTCTGCCTCCTCTTCATCTGCTTCTTCCACCCACCACCACCACCACCACCACCACCACGGCCACAGCCACGGTGGCCTGGGGGTGCTGCCTGATGGGCAGTCCAAGCTCCAGGCCCTGCATGCCCAGTATTGCCAAGGACCAGGCCCGGCCCCGCCGCCCTACCTGCCACCCCAGCAACCCCCTCTCCCCCCACCGCCTCAGCAGCCCCCGCCCCTGCCGCAGCTGGGCTCCATTCCACCACCTCCCGCTTCAGCTCCTCCTGTGGGGCCGCATCGCCACTTCCATGCCCATGGCCCAGTCCCAGGTCCCCAGCACTATACCTTGGGCCGGCCAGGCAGAGCTCCCAGACGGGGAGCCGGAGGACACCCTCAGTTTGCTCCACATGGCCGCCACCCCCTGCACCAGCCCACCTCCCCCTTGCCCCTGTACAGTCCTGCCCCCCAGCACCCTCCAGCCCACAAACAGGGCCCCAAGCACTTCATCTTCAGCCACCACCCACAGATGATGCCAGCAGCGGGGGCCGCTGGGGGCCCTGGATCTCGGCCACCAGGGGGCTCCTACTCCCACCCCCACCACCCCCAGTCACCATTGTCACCGCACTCACCCATCCCACCCCACCCCTCCTACCCACCCCTGCCCCCACCCTCACCCCACACCCCACACTCGCCCCTGCCACCCACCTCCCCCCATGGCCCACTGCACGCCTCTGGGCCCCCCGGCACGGCCAACCCACCCACTGCAAACCCCAAGGCCAAGCCAAGCCGGATCAGCACCGTGGTCTGATGAATGGAGTGTGTGAGCTGGGGACTGGGAAGGTCTGGGGAATCTGCAGGAGAGAGACCTCTCTGCTTCCTCAGTTTTTCCAAAATATACATGCACATAGAAATGTCCTCCTCCCCACTTCTTCCCTGCCTTGGAACCCCTCCTCTAACCCCCAACAGTCTCCTTGGGGTTTCCTTCCAGAGTTGAGACTCCTTGCCACTTGCAGCCTGTATGCAGGGCTCTTGAGCTCTGGGGAGTGGTGAGGACCTTTCAGAGATCCTCGTCCTCTTTTTCCCTCTCTTCACCCTCCCTCTCTCCCTTTCCCCAGAGGTCTAGTTGGGTGGCCTCAGACCTCTGGGCCAGTGTGAGCTCCCCATCAGCTCTGGCTGGTAGGGAAGGGCAGGTGTTGGGAACAATGGGGGTGAAGGCTTCCCCAGGGCACCTCTGGCCAAGTGGGGCTAGGAGGGGGCTCTGCAGTGTTGTGGCCAAACCCCAGCTGGCTCGGCCCTCTCTCTGACCTCAGGGCCTGGCCATACACTTCCAGGTGTCTCCACCTGCTGGAGGATGTGGGGTGTCAGTGCACTCGGTGAGTGGGCCCCCACATATGCTGGTCCCCAGGTGGGGCAGTGCTTCCTCTTTGTAGCCGATCTCTGCTCTCTGTCTAGTGGGCCCCAGCCCAGACCTCTTCAGCTTCAGGACCTTGCCTTTCCTTGCAACGTTCTTATCCTGATCAAAGTCCAGACAGGTTTGGGGCGGGGGGGCTGAGGTCTGGGATGAGAAGGGCGCAGCCCTCCCTCACCCATATTGCATGCCCCCCATTCCCTCACACCTACCCCACCTACAGCTGAAGACAGTGCACTTTACAGATACTGCCCACAAACAGCCCACTGGGGCAGGGCACCCAGCGTCAGCCCTGGGGAGAGGGGCTCCCAGAGGGCCACCATGAGCCCGAGATGTCCTTCCTGAGGCAGACATTGAAGCCATCAGAGTGGGGGCTGGGAGCCAGGATGCCTGAGTCCTTCTGTCCGTCAAACTCTCTGCTGCCTCTCCAGCCCCTTTACAGCCCTGTTTATTTAT EMBV3_01743 GACTAGGGATCATGGACATAAAAAGAGAAAGGCCTGGACAAGAAGAAAGATGGGAAATGG Gene GeneID:533038|TM4SF1:NM_001075980:41_cdna UTR3_Alt 2 NULL GeneID:533038 1 GENE TM4SF1 MGC139884 transmembrane 4 L six family member 1 EMBV3_29425 ACCCTGGGAAATGCATCTGTTGTGTGGCATGGAGTTGGAATGCTGGGGCTTGCAGTCTAT Gene BVV0102_174335 + 0 NULL GK000022.2:16931391-16933319 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128145 TCONS_00126329 TCONS_00128144 TCONS_00126330 TCONS_00128142 TCONS_00126328 TCONS_00128147 TCONS_00128139 TCONS_00128138 TCONS_00126332 TCONS_00128137 TCONS_00126335 TCONS_00128140 TCONS_00126327 TCONS_00126325 TCONS_00126326 TCONS_00126324 TCONS_00128141 TCONS_00126334 TCONS_00126333 TCONS_00128146 TCONS_00128143 2 XLOC_077839 XLOC_077415 Coding TCONS_00128143 XLOC_077839 Coding Coding TTLL3 22:16931311-16955516 j TSS95696 5552 2 TCONS_00128143_3 376 0.205871757925072 12 0.771112212857379 5.48426354920623e-162 2.63756530911694e-27 8.97170564939496e-67 5.88843543689722e-06 3.69092524510733e-42 2.1972236518926e-103 4.80437913399116e-05 1.38000611330351e-51 1.02159709990425e-05 0.000732395939963655 4.33359544062427e-05 6.32830970562893e-05 1.35597224320403e-142 4.63229593311105e-101 1.25848379654612e-144 0.000986048249429367 0.000676673441802263 0.000373234305775537 3.43888878322864e-134 6.35951901306565e-149 4.98603316593382e-05 1.33462030873445e-05 0.000107056236365647 0.000664013084825632 8.34198089987477e-06 1.39496833305814e-47 4.33340479766201e-06 0.000147983696893648 7.86510933067674e-05 3.23347174759685e-05 XM_005196414.1 TTLL3 PREDICTED: Bos taurus tubulin tyrosine ligase-like family, member 3 (TTLL3), transcript variant X4, mRNA. 0.0 2448 98.92 0.250180115273775 XM_005265055.1 TTLL3 PREDICTED: Homo sapiens tubulin tyrosine ligase-like family, member 3 (TTLL3), transcript variant X10, mRNA. 0.0 2024 83.06 0.348342939481268 TCONS_00128143_7 sp|A4Q9E5|TTLL3_MOUSE TTLL3_MOUSE Tubulin monoglycylase TTLL3; 0.0 548 85.20 0.827868852459016 1 coding 1 0 1 1 0.115972508729486 0.652708546131112 0.000349720966497186 0.995077734477434 AGGCGGGCTCTGGGGCCCAGGGAATGCGCGCGCGCGCGGCGAGGGTCTCATGCAGGGGCCCACCGCGGCGCTGCTCCTGAGGGCGGGGGAGCTGGGGGCCGCACAGCCGGACTCCACCGCCTGGTACCGCCAGGAGCGGGGCCCCGTGTGCAGCTGGCCACGGAAGCCGCAGCCGCTCGAGCGCCGCGCCACTTCCCCCGCCCCATGGCCCAGGGCGCGCCACTCCGAGTTCCGGCTTCCAGAGAAGGGTCCGGCGCACGGCCAAGACTGGGTCTGCAGCCCAGCCTCAGCGCGCCGCCTAGACTGCGCCCTCCGCCCCTCGGCCCACGACAGCCACGCCCAGGGCGCCGAGAATCCCCGCCTCCCTGGGCCCTCGCCTACCCGGGCCCAGGAGGACGCCCCGCCCCTGGACGGTTCTCTTGTCCTTTGGCGAGGATTCTCCAAGGCGTCTCAACACATGGGCCGGCTCAGAAACGCCAAGATCCACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCTTTATGATCCAAGGTCGCTACCCTGTGATCCGGTGCCTCTTGCGCCAAAGGGGCTGGGTGGAGAAGAAGATGGTCCATCACTTGGGTACCACTTTGCCACAACCACATAAGGATCTGGACAGCTCGGTAATGGGTGACAGTGACACAGCTGAGGATGAGGATGAAGATGAGGAGGAGGCATTCCGGCCACCACAGCTGTTTGACTTCGATGAGTTATTGGAATTTGATGACCTACATGGGACACACGCTCTGATGTCACGTATGGTTCGGAACGAGATCCCCTACTTCATCTGGACTACTCGTCGGGACATCCTGGACTGTCGCTTCCTCTCCAAGGATCAGATGATAAACCACTATGCTCGGGCAGGCTCCTTTACCACAAAGGTGGGTCTGTGTCTCAATCTCCGGAATTTGCCGTGGTTCGATGAGGCTGATGCCGACTCCTTCTTCCCACGCTGCTACCGCCTGGGGGCTGAGGATGACAAAAAGGCCTTCATAGGTAAGGAGATACCAGCCCCATGCCTAGCCCCTCAAGCCGAAGGAGGAGGGCTAAAGCCCTGGCTGGTGTTGGAGAGCAAAGGGCCTCTCTCATGCCCTCATCTGCCCCAGCAGATTTCCTTCTCCATCCCCAACCCTCATCTTTCCCTTATGTGCCTCCCTTAATGAGCCCCCCGACCTTGGTCACCCCAGACCTCCAGAAGAGCTGACATAGTTTATCTTATTTTCTAGAGCAGATTCTAAAAGTTGGTCACCTAGTTGAGTTTGGAATCCAGAATAAGTTCCAGCCCCCTGTCAGATTCCACTGACTAGATCTGGTTCCAAGTCTAGTTCCAAGAAAAGTTTCTAGACTTTGGGGCTCACGGACAGAGTAGGCTCCAACTCCAGCACACGCTGTAAATTCAGGTCAGAATTTGGATCCACATTAGATGCTAGGTTTAAATTAGTCTCCAAATCCTATATAGATTTGGGGCAAGGTCTGCTTCTCAGGCTAGAATTAAGTATCAAAAGTGGATCAGGACATTGTAAATCGACTATACTTCAAATAAAAAAAAATAGAAAATCACACACATGCACAATAAAAAAAAAAAAAAGTGGATCAGGAACAGAGGAGGAGAAATCAGACAGCAGAACCAAGCAAGATTCTGAAGGTGGAATATGAACCAAGTCAGGTCAGATTCAGGGGCTCGTTCCACAGTTGAAACAGAAGCCAGGTTCTAAGTGGGATTCTAGAGCCAGAAACGGTAGTCAGGTTCCGGATCCAGAGTGGGGCAGGTCATGATCAGGTTCCGGAACCAGAACAGGCCTGGAGCCTAGGGGCTGATGAGGGTATCCCCTGCCCTGGGAGCAGAGGACTTCTGGCTGACAGCTGCCCGCAACGTTCTCAAGCTGGTGGTAAAGTGCGAGTGGAAGTCAAACTCTGTCGAAGAAGAAGAGGCCCCAAGAGACAAGCAGCCAAAGAAACAGGAGAAGAAGCCAGTGTCGGTGTCCCCAGAGTTTGTGGATGAGGCTCTGTGTGCCTGCGAGGAGCACCTTAACAACCTGGCGCATCTGGACATCGACAAGGATGTGGCGACCCCGCCCTGCCTGGGCCCTGAGGGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCAGTATCATGTGCATGGACCACCTGGAGGAAATGCTGAAGCTGGTGGACTGCAACCCCATGATGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATCGAGCGGCCCTTGCTCATCTTTGGCACCAAATTTGATCTGAGGCAGTGGTTCCTGGTGACTGACTGGAACCCACTTACTGTGTGGTTCTACCGTGACAGCTACATCCGCTTCTCCACACAGCCCTTCTCCCTGAAGAACCTGGACAACTCCGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAATTCATGCCACCGGCACCCACTGCTGCCCCCAGACAACATGTGGTCAAGCCAGAAATTCCAGGCCCACCTGCAGGAGACGGGGGCCCCGAACGCCTGGTCCACTGTCATCGTGCCTGGCATGAAGGCCGCAGTGATCCACGCCCTGCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTCGAGCTCTACGGTGCTGACTTTGTGTTCGGTGAGGACTTCCAGCCCTGGCTGATCGAGATCAACGCCAGCCCCACCATGGCACCCTCCACGGCTGTCACCGCCAGGCTCTGTGCCGGTGTGCAGGCCGACACCCTGCGTGTGGTCATCGACTGGCGACTGGACCGCAACTGTGACACGGGGGCCTTTGAGCTCATCTACAAGCAGCCTGCCGTGGAGGTGCCCCAGTATGTGGGTATCCGGCTTCTAGTAGAGGGCTCCACCATCAAGAAGCCCCTGGCGATGAGTCACCGGCGGATGGCCGTCCGCCCAGCCCTCCCTCACCTGCTGGCCCCGAGAGGCTCTGGGGAAAGCAAGGACTCAGGAAGCCCCATCCACAGCCCCTTACCACTTCCCAAGCCTCCACAGCAAGCCCCGGCTGCCTTCTCCCCATGTGCCCTGGCCCCAGGGGCAGGTCCTCAGACTACAGCACAGCAAGCTGGTGGGCACTAAGGCCCTGTCGACCACAGACAAGGCCTTGATGACTCTACCAACCGCCAAGGTTTTGATTTCCCTCCCACCTAACCCTGAGCTCAAGCTGGCACCCAACGCCCTGAAACCAAAAAAGGCTCTTGCTCCCCAGCGCCTTCATGGTCCCTACTTTGGAAGTAATGTGTGGTCTCAGCCCTTTGAAGACGGAAATCTTCCTAGCATCTACAGGAAGAGCAAGACCAAAGGCAAATGCAAGGCCAGACTCTGTGACAGACCAAAGGCCGAGACACACCTCGTGACGACACTGAGCCTTCCAGGACCTCTGACCCTTGTCACAGACCGGGGTTTGGAGGGCACAAGGGACAGGTGGCCACAGAAGCCCTTGCTTCCATCACCATCACCCTTATCCTGGATGCAGCGCCAAATAAAAAAGAGCAAATGAGGTCTTCGAGGCTCGGCTCCTTTTCTCTTGGAGGGTGAAGAGAGAGTATAGTGTGACCCTGTACTCCAGGGCCCAGGACAAGAGCCAGAGGCTGTCAGCAACTCCCCCCCCAAAGCACAGCCCCGCACTCCCACCCAGCAACAACAGGAGACTCAGCAGAGAAGAGTGGACCTGGCTAAACCCCAGCCCTCTCCTGAGGGAGTGGGCCCGTCCCTTCCTCTGCAAGGGGCCAAGGTCACCTCAAAAGGAAATATCCAACAAGCCCCTCTCATCTGAAAAAAGCTCAACATTCCTTAGTTATAATGGGTTGAATGTTGGTATGTCTTCCTAGAACCTGTGGATATGTCTATTTGGAAAAAAAGGTCTTTGCAGATATAAGTTAAAGTTCAGATTTTGAGATGAGATCATCCAGATAGGGCCTCAATCCAATAACAATTGTCCTTACAAGGGACTGAAGAGAAGACAATCGAGGAGGAGGCTGTGTGGAGACAGAGGCAGAGGTTGGCAGGATACGGCCACAAGTCAGAGGGTGCTTAAGCCACCAGAAGTTGGAAGAGGTAAGGAAAGATTCTCCCGTAGAGCCTGTGGGTAGAGCACAGCCCTGTCAACACCTTGATTTTGGACTTCCGGCCTCTAAAACTGGGAGAGAGAATCCATTTTGTGCTATTTTAAACCATTCAGGTTGTGGTAATTTTTTTTTTTTTCCTATTTTTTGGCCGCGCCATGTGGCACATGGGATCTTAGTTCCCCAGCCAGGAATTGAACCCATGCCCCCTGCCATGGAAGTGCAGTGTCTTAACCACTGAGCCTCCAGGGAAGGCCCCAGGTTGTGGTAATTCATTGCAGTGGCCCTAGGAAACAAACACACTAGTCAAATCAAGATAAATACACTCTGATCCAGAAATTATTGCACAGCTGAATGAGAAAACGCAGACAGGCAGACCCACAGCAGCACTGTGGTCACAGCCGATGACCTAAGTGTCCATTAACGTTGGGTGGATAGACTGCAAGCCCCAGCATTCCAACTCCATGCCACACAACAGATGCATTTCCCAGGGTGGAGTGAGAACAAGTCACAAAAGGATATATACAGCACAGTTCCATTCCACAGGAGTTTGAGAAACAAGCAAAACAAAATACATTGTTTAGGGATGCATGTATATGTGGTAACACTTTAAAAAAACAGACAAGGAAAGAATTCTCTCAAGTCAGGGGAGTGGTTTCCAATTGTGACTTTACACTAGTGCCCGTTCTGGAGCTTTTAAAAAAGATGTCTCTGTCCAAGACTGGTAAAAGTATCTTAGGGATGCAGTCAGGGGAGGCATGGGGATTTTTTTTTAAGCTTTCTGAGGGGGCAGGGTAGGGGGTTCTAATATGGGGCCAGGGTTGAGAACGGCTTTGTTCTAAGACAGGAGAAGGATGCTTCTATTTTGTGCCAAGTGGTGGTTACGTGAGTGTCACCTTACAGTTATTCTTTAAGTCACACAGATGTTTTATGCACTCTGTATGTTTGATATGTTACATGGTTTTTTAAAGTAAAATATCTAACATCTAAATGAGTAGTCAAATTCTTGGAGACAGGAAACAGTGGCTACTGGGGCTGAGATGGGTAGGGGATGGGCAGTTGGTGTTTAATGAGAACAGAGTTTCAGTTTGGGTGGATGAGAAAGTTCTGGAGTTGGATGCAGAAGATGGCTACACCACCGTGTGAATGTACTTAATGCCACTGAACTATACACTTAAAAACAGTGAAGATCGTAAAGTCTACGAAGTGTATTTTAGCACAAATTAAAGAAAAAAAAAAACTCTTAACATTTTCTCTCAGCTAGAATTAGGCCAGAAACAGTCAAACATAAAGACTATGTGTTGAACTCAGCAGAAAGCACAGTCCGTGATAAACATTTTCTTTCTCAGCAAATCCTGAAAACGATCCTGTGAGGTAGGTACTTTTATTATTTAAAGCCCAGAGAGGTGAGGTAATTTGGCCAACACCACACAGCAAATGGCCTTAG EMBV3_17894 GTACTCGGACCAGAACCATGGCCTATCCGGCCTATCTACGAAGCACTTATACACTCACAT Gene GeneID:508882|FAP:NM_001098001:82_cdna Constitutive 0 NULL GeneID:508882 2 GENE FAP MGC139104 fibroblast activation protein, alpha EMBV3_43345 GTTAGACATTCCGCAGCATCCTGATCCTAGTTCCTTCTCTTTCTTGAGGGCTGGTTCTGC Gene GeneID:511755|SFXN3:NM_001101946:111_cdna Constitutive 0 NULL GeneID:511755 26 GENE SFXN3 MGC155034 sideroflexin 3 EMBV3_15163 CCACGTCAACCTCCTCTCCAAGATGGACCTCATTGAACACTATGGGAAGCTGGCCTTCAA Gene GeneID:537861|GPN2:NM_001031770:236_cdna Constitutive 0 NULL GeneID:537861 2 GENE GPN2 ATPBD1B FLJ10349 GPN-loop GTPase 2 EMBV3_31863 GCATTAAAGCTTCAGCAAGAAGTACCCGAGGCTAAGTCTCCTCTCATACAAAACTGCAGG Gene BVT0102_240487 + 0 NULL GK000016.2:2692410-2694834 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068492 TCONS_00068491 TCONS_00068488 TCONS_00068489 TCONS_00068487 TCONS_00068490 TCONS_00068493 1 XLOC_041710 Coding TCONS_00068491 XLOC_041710 Coding Coding RBBP5 16:2693744-2734079 j TSS51280 3631 1 TCONS_00068491_2 500 14 0.910323796300888 0.00246843080640177 0.00330166199948941 0.0039791151356895 0.00194367618332829 0.00262131125260841 0.00230424688983996 0.00146004348801497 0.00412139210543816 0.00511321396517034 1.30674954832658e-18 1.00657516435936e-09 0.000160672330319407 0.00055077513976392 1.07838560350526e-07 2.28969859571996e-05 0.00480550213118696 0.00176698184879732 7.56280033762164e-09 0.00154386542091874 0.00205813479803138 0.00117846280687215 0.000726967329042038 9.23759534592623e-05 0.000522718735176675 0.00221896253019798 0.00141494202503583 0.000549148700850468 0.000253220614471737 0.000234182619787191 0.000937435165372003 XM_005216666.1 RBBP5 PREDICTED: Bos taurus retinoblastoma binding protein 5 (RBBP5), 0.0 6524 100.00 0.99586890663729 NM_001193272.1 RBBP5 Homo sapiens retinoblastoma binding protein 5 (RBBP5), transcript 0.0 3526 86.88 0.800055081244836 TCONS_00068491_2 sp|Q15291|RBBP5_HUMAN RBBP5_HUMAN Retinoblastoma-binding protein 5; 0.0 1016 99.80 0.982 1 coding 0 1 1 0 -0.190230956979179 0.575303025976132 0.00938015032146458 0.860365598508276 GAGGCAGGGAGTCTCCGGGGCCTGCGCCGGCGCTCTGCGGCGCCCCCAACTCGGACGCGGGCTTCGCGGGCGGGCGCGGGCGCGGGTGTCGTCGCTGAGCCGAGGCCGGGCGGCCGGAGTCCTCAGGCATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAGAATTATCCAGAGGAAGCTGATGGAACTTTGGATTGTATCAGCATGGCCCTGACTTGCACCTTTAACAGGTGGGGCACGCTGCTTGCAGTCGGCTGCAATGACGGTCGAATCGTCATCTGGGATTTCTTGACGAGAGGCATTGCTAAAATAATTAGTGCACACATTCATCCGGTCTGTTCTTTATGCTGGAGTCGAGATGGTCATAAGCTCGTGAGCGCGTCCACTGATAACATAGTGTCACAGTGGGATGTCCTGTCAGGCGACTGCGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAGTATCATCCACGAGATCAGAACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTCGTTCTGCCCGTAGACGATGACTCCGATTTGAACGTGGTTGCATCTTTTGATAGGCGAGGAGAATATATCTATACAGGAAATGCAAAAGGCAAGATTTTGGTCCTAAAAACCGATTCTCAGGATCTTGTTGCTTCCTTCAGAGTAACAACTGGAACAAGCAATACCACAGCCATTAAGTCAATAGAGTTTGCCCGGAAGGGGAGTTGCTTTTTAATTAACACAGCGGATCGAATAATCAGAGTTTATGACGGTAGAGAAATCTTAACCTGTGGAAGAGATGGAGAGCCTGAACCCATGCAGAAATTGCAGGACTTGGTGAACAGGACCCCGTGGAAGAAATGCTGTTTCTCTGGGGATGGGGAGTACATAGTGGCAGGGTCAGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTAAAGATTCTCCATGGGACCAGAGGAGAGCTCCTCCTGGATGTAGCTTGGCATCCTGTTCGACCCATCATAGCGTCCATTTCTAGTGGAGTGGTATCTATCTGGGCACAAAATCAAGTAGAAAACTGGAGTGCATTTGCGCCAGACTTCAAAGAATTGGATGAAAATGTAGAATATGAAGAAAGGGAATCAGAGTTTGATATTGAAGATGAAGATAAGAGTGAGCCTGAACAGACAGGGGCTGATGCCGCAGAGGACGAGGAAGTAGATGTCACCAGCGTGGACCCTATCGCGGCCTTCTGTAGCAGTGATGAAGAACTGGAAGATTCAAAGGCTCTATTATATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTATGGCCCCCCACCGGATGCAGTCCAAACCTCCCTGATGGACGAAGGGGCTAGCTCAGAGAAGAAGAGGCAGTCTTCAGCAGACGGGTCCCAGCCACCTAAGAAGAAACCCAAAACAACCAATATTGAACTGCAAGGAGTACCAAATGATGAAGTCCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGCAGGAGGAGCAATCTCAGAACTGTTATGAAGACCCTTGAAGTTCTTCATTCTTCCCTACTTTGCCATCATGTGGCCTCTGGACACTGTGGTCAGTCATCTGAGATTGACTTTAATTTAAAACAAAGGCCTCTGTCTTCCACCCAGGAGGTGGAAGGAGTGAATTTTATGTTTGAATGAAGAAGTGAATTATGGAAGAAGAGTATATGTCCCTTCCCTTTCAAGCATAAGTCCAAATAGACTCTCAGGAATGAGGATTTGTGAAGACATCAAACAGGAGTTTTGACTCTTTAAAAATGCTCGTTATGTTGCTGGAGGAGATTGCTGGTCTGCTCGTCTGTCTTCCCTGTACCCAGCACCGTTTCGGCTTCTCACTTCCTATCTCCTACTTGCCTTCGCTCCTCAGTGCATGTCCTTGAGTGACTTACTTTTACCTGAAATTTTGCTGCCTGTATCCTAGAAAAAACTTCGGTTTGCACATTCTTTCTTCCATTTTAAAGTTACCTACTCACCAGATGCCTCCTATATTTCCATAGTCTGTTACAAAGGACGGGCAGAAAAGAAAGTGCTTGGAGATTTCAGATTTTCTGAGAGAGAGATAGGAAAGGCCCCCTCTTTTTAACATTCTGTAACATTTTGCTCAAGCTGGGCTGTAAGACGGTCAGGGTTTTTCTTGGTTTTCTTCTCATTGCATGTTTCTCTCCAGTATTGGTTCATTCAATCATGGTTTATGAAGATAGCTAGTTTCATTTGGTCTCCAGCAAAGAATCATTAGTAGTTTATATTGCTTTACCTGTACGGGCTTCCAGAGACAAAAACAAACCGGGGTGTCTCTGAACAAGCTTATTTTATACTGGGGTGGGGGAATCTATGCAAGGACTAAATAAAACCGTCCATAATCAAAGCAGCAACAACACAATTCAAATAAAAAATCAAGGAACCTTTTTTTTTTATCATTGCTTGTGGACATCTGTCCTTCCCATCAGTCATCGTGTTTCCCCACGCTCCTTTTCCTTCCTACGTGTTTCCAGTCACTTCCTTTCTGTGAAAGGTTGCTTAGCTTTTAAAATTTTTTAATTTTTGCTTTTGCTGTTCTTTGTATAAAAACTAGCAGATTGGATGGCTGTGTCCCCCAGGTGTTTGAAATTCTCTGAAAATCCAGAGTGAAGAAACGAGGTGTGCAGAAGGCTCTCTAGCCCCTCTGAGTAGAGCTTGAGCTAACTGGAAGTGCTCAGTCTGGATCATCATTTTCACGGTATTTTCAAAGGAGAGTTAAACACTGTGCTTATTGGGAAATCTCTGTTGGTTGGTGGTTGCTTCAATAGGTAGCCAAACAAGTTGATTGCTTTTTGGATTTTAGCATAGAAATCAAAGTAGAACACATCAGCAAGAGTCTCTTCCATTCCGTCTCTAGAACCAAAATGTTCAGTAGTTGAAGAGCTCTCCCTGAACCAGTGGCCAAATGTCTATATTTTTAGATGCCACTGTCTTTTCCTCAGATGCTCCTTTTGTGAATTTCATTTCCTATTTCATATCAGACCAGCGGTTGAGATTGGTAGGTGGGTCACTAGGCATGTTTTTGTTTTGCGGACATTATTTCCATTTCATTTCTCTCTCTACTGTACACTGCAGCAGTATGCAAACTGTGTGATACAGGCGGCCTCTGCCTTATTTCTGCAAAGTAGCCGGGTGTCCTCTGCCTGAGCATTTGGGTGTTCAGCCTCTGTCCGCCTCCTAAACTGGCTCCTGAGAAAATCAACGTCAGCCCTGCCAGGGTGTCTGGTAGCAGCTCCTAATAATTATTTATGCTTCTGGAATTGTTTGCAGCTCCTGAAACCTTGTGTCCGTTTCAGTTTGATTCTCTCGATTTGTACAATATATGCATATTCTTTTTTCCCTTCTGTCACCCTCCCCTCCCCTCGGCGTTTTTTAATGTCCTGTAGTTTTGTATGAGAGGAGACTTAGCCTCGGGTACTTCTTGCTGAAGCTTTAATGCTTTGTAAATAAAATCGGATGTTTATTAAAGAACAG EMBV3_28101 GCACATTAATGAAGTCTCCTTTATGTACAGTTGGGAAGGTCCCCTGGAGGAGGAAATGGC Gene GeneID:519018|SKP2:NM_001102052:27_cdna UTR3_Alt 3 NULL GeneID:519018 20 GENE SKP2 MGC152600 S-phase kinase-associated protein 2 (p45) EMBV3_04473 GCAGTTGCGAGAACAGTGGAAGAAAAGTGGTTACCAACTGGAAAAAGATGAACTACTGAG Gene GeneID:407144|TRNT1:NM_001045876:8_cdna Constitutive 1 NULL GeneID:407144 22 GENE TRNT1 MGC140399 bMtCCA tRNA nucleotidyl transferase, CCA-adding, 1 EMBV3_18308 CATTTTGCACACTGCCTGTTCACACTCCACATGTCGCCCAGGCGGGAAAGATGGAAAATA Gene GeneID:536625|EVI5L:NM_001099075:81_cdna Constitutive 0 NULL GeneID:536625 7 GENE EVI5L MGC157176 ecotropic viral integration site 5-like EMBV3_02607 GGCTCCTTTTCCGAGAGGCTGCTGACTTCGGTAATGCCCAGTGATGTCCGAACACTTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37865 AGTGGAAGCAGGAGGGAGTCGCCAGTTTGGACAACAGAAGATACTCCTACTTGGTGTAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26008 AAGAGAAACGCTATCAGTGCCGGCCAGGGAGGACTGTCAAATGAAAACCCAGTGACCAAT Gene GeneID:521115|PDSS2:NM_001100385:38_cdna Constitutive 0 NULL GeneID:521115 9 GENE PDSS2 NULL prenyl (decaprenyl) diphosphate synthase, subunit 2 EMBV3_10411 TCCTAACCTCGAGCACGTTAACTCACTTGGCTAGGCCTCAGTTCCACCAGAGCCTAAATT Gene BVV0102_166618 + 0 NULL GK000015.2:24165754-24209227 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03329 CCGTCTTCTCTAGGATGGTTCTAGCCTAAGCACGTTGACTTTAGACTAGTTGAAATGGAG Gene GeneID:506267|RNF149:XM_002691151:183_cdna Constitutive 0 NULL GeneID:506267 11 GENE RNF149 NULL ring finger protein 149 EMBV3_03820 GAAAAACCCAGAAAAACGCATCAGATTTGTGTACATGAGGGTATGCCAACAAGGGTGGCC Gene BVV0102_145632 + 1 EMBV3_11594 GK000030.2:69060461-69100653 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251685 TCONS_00127087 TCONS_00127088 2 XLOC_154626 XLOC_077562 Coding TCONS_00127087 XLOC_077562 Coding Coding DUSP7 22:49379909-49387454 j TSS95137 3433 1 TCONS_00127087_3 368 3 0.545334040296925 0.0224022459179142 0.0190191078824358 0.0171290196542453 0.0143654856170573 0.0216804573054515 0.0118724944507648 0.00790809308780846 0.0173311312388329 0.0177297877113775 0.00970910977223373 0.00450101506189246 0.00218389604142468 0.00633880117268566 0.0196881489162866 0.011531376851118 0.00264506406083367 0.00149736089685519 0.000916012620785269 0.00643088567573658 0.00837052563217194 0.00410344961810175 0.00254325967754375 0.00117667386369751 0.00110497461321594 0.00914078674507669 0.00641284222181094 0.00473189883752182 0.00141792521109991 0.000933862668131588 0.0022084272337623 NM_001101294.2 DUSP7 Bos taurus dual specificity phosphatase 7 (DUSP7), mRNA. 0.0 4551 100.00 0.734634430527236 NM_001947.3 DUSP7 Homo sapiens dual specificity phosphatase 7 (DUSP7), mRNA. 0.0 2304 83.37 0.604718904748034 TCONS_00127087_3 sp|Q91Z46|DUS7_MOUSE DUS7_MOUSE Dual specificity protein phosphatase 7; 0.0 764 99.46 0.997282608695652 2 coding 0 0 0 0 0.0472066619530243 0.796146617707418 -0.030804274605136 0.66694241486401 ATCTGGATCTGGCGCCGGCACCGGGGCAGACGCGGCGGCGGGCGCAGGGGCCATGCCCTGCAAGAGCGCCGAGTGGCTGCAGGAGGAGCTGGAGGCGCGCGGCGGCGCGTCCCTGCTGCTGCTCGACTGCCGGCCGCACGAGCTCTTCGAGTCGTCACACATCGAGACGGCCATCAACCTGGCCATCCCGGGCCTCATGCTGCGCCGCCTCCGCAAAGGCAACCTGCCCATCCGCTCCATCATCCCCAACCACGCCGACAAGGAGCGTTTCGCTACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACGACGAGGCCACGGCCGAATGGCAGCCAGAGCCCGGCGCTCCCGCCTCGGTGCTTGGCCTTCTCCTGCAAAAGCTGCGCGACGACGGCTGCCAGGCCTACTACCTCCAAGGTGGTTTCAACAAGTTCCAGACAGAGTACTCGGAGCACTGCGAGACCAACGTGGACAGCTCGTCCTCGCCAAGCGGCTCACCACCCACCTCGGTGCTGGGCTTGGGGGGTCTGCGCATCAGCTCTGACTGCTCGGACGGGGAGTCAGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCGGTGCCGTCCAGCCAGCCAGCCTTCCCCGTTCAGATCTTGCCCTACCTCTACCTCGGCTGCGCCAAGGACTCCACCAACCTGGATGTGCTCGGCAAGTACGGCATCAAGTATATCCTCAACGTCACGCCCAACCTGCCCAACGCCTTTGAGCACGGGGGCGAGTTCACCTACAAACAGATCCCCATCTCTGACCACTGGAGCCAGAACCTCTCCCAGTTCTTCCCCGAGGCCATCAGCTTCATTGACGAGGCCCGCTCCAAGAAGTGCGGGGTCCTGGTGCATTGCCTGGCGGGCATCAGCCGCTCGGTGACCGTCACAGTGGCCTACCTGATGCAGAAGATGAACCTGTCGCTCAACGATGCCTACGACTTTGTCAAGAGGAAAAAGTCCAACATCTCACCCAACTTCAACTTTATGGGGCAGCTGCTGGACTTCGAGCGGACGCTGGGGCTGAGCAGCCCGTGTGACAACCACACCCCCAGCGAGCAGCTCTATTTCTCCACACCTACCAACCACAACCTGTTCCCACTCAACACGCTCGAGTCCACGTGAGGCCGGGGGCACTGGGCGATGGGCTAGCCCCTCCCGGGCCCCCACAGGGCCCGCCGGCAGGGCCCAGGCCTGCCGCCTCTGGCCCGAGGAACCCAGACATCACCTGTGCCGAGGTGAGCTCCCCTCAGTGTCCCACAGCCAGGCCTCCACCGGCAGGACTTTCCGGAGGGGCCCGAGGCGATCAGACACATGGCTTTGGGAGTCCCTTGGGGCCTCTCCTTGTCCCAGGACACTCCTTTCTGCTGATGGCTCAGCCAGTTTGGCTGTTTTTTTAAAAGACACATCCACGGACCTGAGTTTACTTTTTACTTTTGGCAGGTAAACCCAAGCTCCCTGGAGCAGAGAGCGTGTTGAAGCTCTGCTTGATTGCTCTTTTCTGTAATGGAAAGTGTTATTTTCAGGCTACATGCAACAGTGGACTGTATAAACCAGTATTTCATCCCTTTCTTGATCCAGTGAGAGAGAGAGAGAGGTGTTATCAGTTTGTTTTTCTTCCTATTTCAAAAAGCAATTCTTGAGTTTTTGTTTCTGTTTTAATGGAAAAGACAAACCCCACGTTGATCTTGACCAAATGCGTTTTGCACATGTGTGAAGCCTCCGTTTCTGCAGCGGCCCTTAAAGGGGTGGTTCGCTGCTCCCAGCAGGGGTCTCCCAGGCCTGCCCGTATCTCCCGCCTCGGCCGAGCCCACCTGGCGCTGCATTTGCCTGTGATGCCCGCTGTGAGTGGTGGGCTGGACGGGTGACCTTTGCCTTCTCTGCCCACCCACTTGTCCTCTGGTAGTCCCTGCAGACCACCCCAGGCAGAAGAGGAGGCCACAGGGGACTGCCAAGCAGTAGCATTAACCCTCTGGGCTCAGCCCTGAGGAGGGCCCCAGGCCCTTTTTATCCACTACTTCTGTCTCTCTCTCTCTCTCTCTCTGGCTGAGGGAGCAGGCCCAGTGGCTGGGGAAGTTTAGGTGGAGGGCGCAGCCCTGCCTCCCAGGTCTCCTCCTCCACCCTGGCTGTTGCTTGGGTTCCAGCTGCCACTCCCAGCCCCTCAACCCGTGGAAGCCGGCCCTGTGCGCACCTTGCCCATGCCTTGGGTTAAGAAACTCATCCATTTCAGCCCCGGGGGGTGGGGGATGGGGCAGCAAGGGCGGACAGGGAAAGGGGTGTGAGGCCTGTCCATCCCGCCACCCAAGCCCGCTGTCCACAGAGCAGAGCCACGGGTCCGGTATCCTCTGGTTCCGTTCCTTCTCCAAGCTCCATTTTCCCGGGTGGTGGAGCTGCATGGGTCCTAGGGAGGGCCGGGGTCCCTGAGCGAGCCAGCACTCGGCGTGTGAGCGAGGCCACGGAAACCCTGCCCCAATGCATCTTACCTCACAGGGCTGGTTTTCAGGGATTCTTCAAGGCAGCAGGTGAAAATCTTGCCACAGTTGAGAAATTGACAAGAAGCTTCCATGTTGTGTACATGGTTCTCTTTCTCTCTTTTTTACCTTTGAAAAGAAAAACCCAGAAAAACGCATCAGATTTGTGTACATGAGGGTATGCCAACAAGGGTGGCCAGTTTTGCTTTATGATCTTATGAAGGAAAATTTGTGACCCTACACACACACACACACACACACACACATATATATATATATTCCCGAACGGGACTTTGTTTATATTGCAAATAAATATTATTTTTTCTTTAAAATGAGTGGTGTCTGATAAGGGCCAGGGCAATGAGGAGAAGCACTATGGCCATATCCGGGGGCCTGCTGGGCACTTACTGGGACTGGTCAGAGGCACCCAAAGCTGGGAGGAGCAGCTGGGGTGTGGGTCGGCAGGGACACTGGGGCTTTGGCCCCCTGGGTGACAGGAGAGCGAGGTGTGGAGACGTTCCGTGCGCCAAGGTCACACAGCAGAGCCCTGCTTGCCCAGACACACCCAGCACTGCCCGCCCGGACGCTGCCCAGACCGCCCAGCCGCCCCAGGTCCTGACTGGCCCCCGCAGCCCTGGCCCTTCCTCTTGCTGCTCTCGGGGATGGGACATGGGCTGTGCATCTGTCAACCTCACTCTCCCCCACACCATCCCTAGGATGCCTGCAGGACCTGATGCTGGTCAGTGAGTGGGCCAGCCCCACGGGAGCCAGGTCCCTCGGCCCCCCTGAGCCACAGCATCCATTTCTGTACAGTGGGGCCAACACACCCCGATGCCTGGTGTGTTCCCGTTCAGGCATGATGAGCCTTCATTTCCTGGTCTTGACCTGGGCCTCCAGGGGGGCCTGGTCCATGGCTGGCTTCCCCAGG EMBV3_22385 TCAGAGTTTCCTCTTGCTCTAGTCAATCTACCCAGAGATGCCCCTGAGCACACCTTGATG Gene GeneID:540895|KCNIP2:NM_001102250:213_cdna Constitutive 0 NULL GeneID:540895 26 GENE KCNIP2 MGC155025 Kv channel interacting protein 2 EMBV3_18531 GAGAAAACTCGTGGATGATAAGATGGTGCTGGAATGTGTCATGAATGGTGTCACTGCCAC Gene GeneID:281759|FABP4:NM_174314:257_cdna Constitutive 1 NULL GeneID:281759 14 GENE FABP4 NULL fatty acid binding protein 4, adipocyte EMBV3_05263 CCCTCCCACCAATCATAAAGTCTTCTTTCCAAAATAACCTGATCATCTTAATTCGGGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12221 GCCTGGTGAAATGCCCTATGTATGCCAGTTACAGATCATCATTCTTTGCAGATGTGGATG Gene GeneID:782608|LOC782608:XM_002707867:574_cdna Constitutive 0 NULL GeneID:782608 17 GENE LOC782608 NULL similar to Zinc finger protein 280B EMBV3_33712 GGTGGGTTCCTGCATGACCGACCTGGTCAGAATTTACATATCAGACTAAAGATGCTGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11014 TGCCTAGGACAGAAACATGGGCTTCCCTCATAGCTCAGTCGGTAAAGAATCTACCTGTAC Gene GeneID:511498|LOC511498:NM_001075520:108_cdna Constitutive 0 NULL GeneID:511498 26 GENE LOC511498 MGC140472 cytochrome P450, family 2, subfamily c EMBV3_27903 AACGGGTTCAGAGAGGTTTAGTCATTCACCCAGATCGCACAGCTAGTCAGGATTTGTGCC Gene GeneID:526038|CAPN13:NM_001035360:47_cdna Constitutive 0 NULL GeneID:526038 11 GENE CAPN13 MGC127252 calpain 13 EMBV3_04808 AATGCAGCTAGACACAAATGCAGCTAGACACAAATGCACAGTGGCAGGAGAGAGAAGGCC Gene GeneID:522029|RPL7L1:XM_002697242:430_cdna UTR3_Alt 5 NULL GeneID:522029 23 GENE RPL7L1 NULL ribosomal protein L7-like 1 EMBV3_36225 CCAGCTACGGCAGTTGCAATGAAGTCACTAGTTTCCTCAGGCTTTCTATGATTTTCAGTC Gene GeneID:511013|LYSMD2:NM_001075485:59_cdna Constitutive 0 NULL GeneID:511013 10 GENE LYSMD2 NULL LysM, putative peptidoglycan-binding, domain containing 2 EMBV3_06700 CCTAGAAAGTGTTGCTGTGAACCTGCCCATGTAGAGGCAGGAGACTGGATGAAATGTCCT Gene GeneID:507598|LPAR5:NM_001034304:25_cdna Constitutive 0 NULL GeneID:507598 5 GENE LPAR5 GPR92 MGC127364 G protein-coupled receptor 92 EMBV3_04897 TATGAGACCTTTGAGATTTCGGAACTCTCCTGGACCTTCACGAGACCTACCTCAGAGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19044 GCATGTTCAGAATAACTGAGGACTTGCAGATACGAAGGTATACAGGCGCAGCGGGAAAGG Gene GeneID:506569|TTC3:NM_001109767:12_cdna UTR3_Alt 2 NULL GeneID:506569 1 GENE TTC3 NULL tetratricopeptide repeat domain 3 EMBV3_11064 GACATAAGCTCGATTCCCGGTCTGGGAAGATCACACATGCCACAGAGCAACTAGGCCTGT Gene BVV0102_147017 + 0 NULL GK000005.2:110023710-110069385 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193362 TCONS_00193359 TCONS_00193360 TCONS_00193363 1 XLOC_117447 Coding TCONS_00193360 XLOC_117447 Coding Coding NOL12 5:110021320-110029740 j TSS144521 4606 3 TCONS_00193360_5 120 0.237516283108988 5 0.453498040147286 0.00042918101903529 0.000711888654806294 0.000856298010578772 0.000690799551234951 0.000495634136309683 0.000671307292116693 0.000692627954860684 0.000149359202960239 0.000710065520623308 0.000411919499030899 0.000162616517997748 0.000218448125053774 1.08952675972039e-08 8.38089713856577e-11 0.000173884010215695 0.000178728107711365 5.09239376831568e-12 4.84383512281732e-10 0.000768820035458328 0.00251177288162027 0.0001320412904887 7.60050828307372e-13 0.000258060929881512 0.000153398120599585 0.00101820255808165 0.000689803040270405 3.96217324238014e-05 0.000102383900911985 3.53118524723448e-05 0.000203756888049988 NM_001046557.2 NOL12 Bos taurus nucleolar protein 12 (NOL12), mRNA. 0.0 1698 99.89 0.204732957012592 NM_024313.2 NOL12 Homo sapiens nucleolar protein 12 (NOL12), mRNA. 5e-108 398 74.04 0.125705601389492 TCONS_00193360_1 sp|Q2KIV0|NOL12_BOVIN NOL12_BOVIN Nucleolar protein 12; 3e-47 153 100.00 0.905882352941176 1 coding 0 0 0 0 -4.37500728521273 0.00925312394364762 0.0723581596674634 0.500964680799151 AGCACTTCCGGGAGGTTGTCAGTTCTACAGCCGGAAGTGTCTTTGGTGCGCGGAATACGCGCCGCCGGAGAGTTCGTGCTATGGGCCGCAACAAGAAGAAGCGAGATGGTGACGACCGGCGGCAGCGGCTCATCCTGAGCTTCGACGAGGAGAAGCGGCGGGAGTACCTGACAGGCTTCCACAAGAGGAAGGTAGAGCGGAAGAAGGCAGCCATTGAGGAGATCAAGCAGCGGCTGAAGGAGGAGCAGAAGAAGCTCCGGGAAGAGCGCCACCAGGAATACTTGAAGATGCTGGCAGAGAGAGAGGAGGCTCTGGCAAGGGGCCGGGTCTGGGCCTGAGGAGGAGGTGTCATCCATGGAGAAGCCGACCAGAGCCTTACCCAGGAAGTCCAGGGACCCTCTGCTGTCCCAGCGGATCTCCTCTCTCACGGCCTCACTGCATGCACACAGTCGCAAGAAGGTCAAGAAGAAACGTCTTCGCCGGGCCCAGGACACCACCAAGAAGCCCCCGAGCGCCACTCGTACCAGCAAGACACGGCGCCGCCGGCTGACAGGCAAAGCCCGGCACAGCGGGGAGTGAGCTTGGAGACCCCGGCCAGGCACCAGCCTTGTCAGCAAGGACCTGTCCTGTCTCAGCTGGGCTGTCTCATAACCCAGCCTGCACCCAGGCAATGACTACAGCCCAAGCTTGGGAGGCCAGCACCCCTCCAGCCTGGGGTTTGGACTCCAGAAGGTACAGGCAGCTGAGAGCTGGCCTCCCCCAGGAGGAGCCTCCGGGGGCCAAGTGTGGGGCGTCTGGCCAAATGTGAACCTCCCTGGACCTTCATCAGATTTGTGAAACTAAGCACACGTGTGGTTGGTTTGTCCCTGACCCTGATGCCGCACACCAAGGGCAGGCGTCTGGGGACGTGGGTCACCCTCGCTGTCCAGCAGTTCTCCCTCTGGGTATGTAAAAGTGGTGCTAGGCCTGGGCCCCCTGATGGGCTGAAGCCCGGCGCCACCCCTGGCAGACACAGAGTCTGCCTGCAGCCCTGGAACGCCGGCCCGTGGGTGAGCAGGGATAGCCTCTGCCTTTTCCCAGCTGGGAGTTGGGCTTGTGCCTCCCCTTGGCCGTGCTGGTCTCCTCAGCTGACATCGAAGGAGTGGAGATGGGGGGTCCGGGAGTATTCTCACCCCCAAACGTGGGCAGCTTCTGTAGGCTTCCAGCAGCTCCCAGACAGCCCAACAAAAAAAGAGTGATTAGTCGTTTGTAAAGAAAATCTCTCTCTCCTCACTGAAAGCGTGGCTGGCGGGTGCTTGGTGAGGGCTGCCGATTCTTTACACTTCTTCCAGGTGCGGCTTCAGAGCCGATGGAAACCAGCCTTGTTGCAGCAGGTGAATGACCTGTGTCACTCACACTCCCCGCTCTAATGACGGACCTGGGCTGGTGGCAGGGTGTAGGTCCGCCTGCCGCAGGTGGGTGTGGTGCGAGGGTGGGCAGCCGGAGCACCTGTTCTGGAGATTCAGACCCTGCTTGCGCTGACTGGTTCCTGTGGCTGTGGACCAGGGCCCAGGAATTTCGGGTGCTGCCCTGATTCGGGGAGCCGTGCCCAGTCCTGACACCAGGACTGCAGAGGGGTGAAGGGTGAGCTCTCGGCCCCTGTGAAGCTGGTGGGCTATTGAGTGTGTGTGAAGGGAATGCAGGTTCCGCCCCTGCACTCAGGGGCTCCTGGAGCCAAGGGGGCAGGGATCTGGGGTCTGCAGGGCAGGCCTTCCCCTTCATTCACCATGGAGGGCCTGCTGGACACAGTCCTGGCCCTGCATTGGGCAGGCGCTCTCCCATCACCATCAAAACCCACCATCTGGGGCTTCCCTGGTGGCTCAGGGGTAAAGAATCCACCTGCCAGTGCTGGGGACATAAGTTCGATTCCTGGTCTGGGAAGATCACACATGCCACAGAGCAACTAGGCCTGTGTGCCACAACTGCTGAGCCCCTGCTCTAGAGCCTGCGTGCTGCAACTAAAAAGCCTGCACAGCAGTGAAGACCCGGTAGAGCCAAAAAAACCCACCCCATCTGGTGCTGGCTGTGCATATCTGAAGGCCACACCTGGCCGTGGGAATGTGAAGCTCAGGGTTTATGGCTGGGAGGCCCTATGACCTGGCTTCTCTGGCTCCTTCCACCTGATCTCCCTGCTGCCTTCCTGTTGTCCTCCCCATGTGGCTTAGGGTGGGGCCACTCGCCTCACTTGGCTGCCTCCATCCATGGCAGATGGCAGGGTCTGTTACTGGGCCATCTAGATGGTTCTGGTACTTGACCCAGGGCAGTGAGTCTCCTGACGCCCTCATGAGCAGGAGCAGAGATGAGCCCGGGGTCTGCACACGTGGCCGGGCTGGGATTTGAGTCGTAGTTCTACTGCTGGCCCACTGTGTGAGCCCACTGCTGCTGACCTCCTGGAACTGTTACCCCACATGTAAAGTGTCATAAGACACCTACCTCGCAGGCCTGCCCGGAGGCTGAAGTGAGGCCACGTGCATGAACCACTTCCCACGGCTCCTGACGTTTTGGGTGCACCTTCTGTGTGCGCAGCTGCTTCTCACACGCCTGACCCTGCTCTCTGTCCCCAGTGCCATAGGGTCTTTTCACAACTTACAATCTATATTTGTAATGTTGATCTGTATTAAATTCTCATCTGTCTCTCTCCCACCTGTGCCCTTTTTTCATCCAGCAGACCAAGAAAGTTGAATCATGGTAATCTTTGTCAATCCTAAGATCAAAAGTGCTGGAGTGAGAACCCTCTGGAGAACTTTCCATGTTCTACCTGAATTCTTCCTGTCACTGTCCATCCGTCAGGCCCTGCGGTTTGGGGCCTTTAGGAGCTTAATCAGGAAAGATTAGATTTAGCTACATATAATGTGAAACAAGATTTTAAAATAACTGGCTTATATAAAGCTAGAGTTTTCAGGTTAACAGAAATAGAAGGCAGCGAGCCTGAAGCTGAGAGGGCAGGCTTTTAGCTTTTCGTTTTGTGTCGTTTTAAACACAGGTTCTACCTCGTGGTCCAAGATGGCTGCCTGAGCCTCAGCCATCATATCTGCCTCTCAGTTACAGAAAGGAAGAAGGGATGAAAGTCAGGTCCCTCCTTTTAGAAACACATGATGCTGGTGCTATTACGCAGGCAGCAAAGGCTTTAGGGCAGGAGGAAGAAGGAACTTCTACCTGTCAGGAAGGCTGAGGAGCGTGGCTTGTTCTGGAGAACCATGTACCCATCTAGGAATTGGGGAGTGTGTTGCTGACGAGGGAATTGGTATTGGGGTGCAAGCAGCAGATTGTCCCACAGGAGCCAGAAATGTTAAAGGGCTGTCTGGAGGGGATCCAACTGTGGAACTAAAGCCATAGCAGAGGCTTATCCGTTGCTGTTACTACACAAGTTTCCTGATGGGTCAGGCCTGTGCTAGTAAAACAAAGCCATGGCCATAGTTACTGGGAGCCAGGCCTCAGCTCAGTAGTAGGCTCTGGTTTTGGGGTAGCCTGATTCTCCCTGGGAGCTTAGGGTGAGGAGGCCAGGTGGAGCCGCCCTGTGGGTCTGGAACTGAGGAGGAGAGGGACTGGATGTCAGGCAAGCCTTAGCTTCCTGTTCCAAAATCCTCTGGATCCTGGGACTTCTCTGGAGGTCCAGTGGCTAAGGCTCTGTGACCCGAATTCAAGGGGCCCAGTTTCAATCCCTGGTCAGGGAACGAGATTCTGCATGCTGCAACCAAAACCCCGTGCAGCCAACTAAATAAATATGAAAAAAAAAATCCCCTTGACCTTGATGTTCCCTAGACTTGAGCTGTTGCCCTCCCTTTGGCTATGTGGATGGTTCTGGGGAGAGGTTCCCAATTCATCCTAGTGTGGGGAGCTCACTCCCTGCGCTCGTGAGCAGGTCCATCTTAGCAAAGTCCTGTTCTGAACAAGCATTTGCCTCCTTCAGACGCTATGGAAGCCCTCCCTTTAGGTGCTCACAGGCTGCCCTCAGCCTGCCCTGCTCTCCTTGGCTCTCAGTTGCCTCCTCTGGGAAGCCTTCCCGACCCCTGGGAATCAGTCATTTCTTCATCTGGGCTCCAGGTACACTTTGTGTTTCTTCCTTTTAAACACTGATCATGTTCTCACTGGGTTCCCTCTCTCCCCCGGCCAGGCCCTGAGCAGAGTGGGAAGTTTGTGTCGGTCATTTCTGTGTGTCTACCCCCACACAGGACTGGAGCCCCTAGGTTTTCAGCCAGTTCTGGCTAGATTACACTGAAGTCAGTCCCCCTCCCCACCAGTGTTCTCATATAATCCTTGAAATAATCTTTCTGAGAATGCTCTTGGCCCTAGTGCCATGTTTGCCTGTCTGCAAGTTTCTAAATCTAGTTTTTGCACCTCACCACAATCATCTCCCTCAGGCCTTTGCTGAAACCTTCCCTGTCCAGTGAACTTTGCTCTCTCCCTTCCCTCTTAGTCACCATGACTGGCAAATAATCAGCTGAAGGAGGATAGGAAACAAATTTATCAAGCGCCTCCAATGTGCTAGTGACATTATCAACTCACAACAGTATTGTGTCGTGGGTACTAGCTCCATTTGACAGATGAGAAGACTGAGTCTCAGATT EMBV3_16142 CTCTATGGCAAGCTGAGCACACGGATCCCACGGCATGGGGACACGCCATCCATGTACTGT Gene GeneID:524061|ADARB2:XM_002692186:67_cdna Constitutive 0 NULL GeneID:524061 13 GENE ADARB2 NULL adenosine deaminase, RNA-specific, B2 (RED2 homolog rat) EMBV3_09538 AGTGCCGTGAATGAACTAAAAGGAATGCTGGCCTCCCAGTAACACTGGATACAGGAAACA Variant GeneID:532603|LOC532603:NM_001110080:57_cdna 74^266 2 EMBV3_09107 GeneID:532603 26 GENE LOC532603 MGC140222 hypothetical protein LOC532603 EMBV3_32810 CTGTCAGGTGTCCTGTGGCCTCCCAATCCCGACTTTGTTCTCAACTGAAAAATCTCTCCA Gene BVT0102_204322 + 0 NULL GK000025.2:26769346-26796458 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146697 TCONS_00146698 1 XLOC_089176 Coding TCONS_00146697 XLOC_089176 Coding Coding CD2BP2 25:26792632-26799208 = TSS109610 5430 1 TCONS_00146697_3 341 0.402946593001842 7 0.175209125475285 0.00016445390671101 0.000354896337638115 5.09555175754273e-05 5.79244664871585e-05 0.00020976645267489 6.75590669690354e-05 0.000157530173170728 2.74206827178565e-09 0.000435920505497883 0.000152333415849566 1.28040892611352e-05 7.35585490433235e-05 0.000117955205136174 5.56453404983238e-05 3.51534347500414e-05 0.000147953980858593 0.000338007126285048 0.000456168159571895 0.000234339821964053 0.000980403477230577 1.69310385850037e-05 0.000588058284015202 0.000138692324106288 6.38127762725533e-09 0.00109846033678797 0.000354636671547337 0.000187811455030388 5.41756201015562e-05 0.000108665968230038 1.69812856436946e-05 XM_005224902.1 CD2BP2 PREDICTED: Bos taurus CD2 (cytoplasmic tail) binding protein 2 (CD2BP2), transcript variant X2, mRNA. 0.0 4809 100.00 0.490791896869245 NM_006110.2 CD2BP2 Homo sapiens CD2 (cytoplasmic tail) binding protein 2 (CD2BP2), 0.0 1698 86.44 0.26427255985267 TCONS_00146697_3 sp|Q9CWK3|CD2B2_MOUSE CD2B2_MOUSE CD2 antigen cytoplasmic tail-binding protein 2; 0.0 553 88.34 0.997067448680352 1 coding 0 0 0 0 -0.396493549407253 0.0210989508485604 0.0473380835755283 0.321317522431134 GAGACTCAACCCGGGAAAGAGAAAACTAGGGCAGGAACCCACCGGCCCTGCTGGGACTTTGTTCCTCCATCATGAACCTGGGCGCCCCTTTCTCCTCAGAGCCTCTACTGTTGTAGGAGGAAACCGAGCCCACTTCCGGCCATCCTCGTCCGATCAGGGTCTAGGCGTTCAAATGTCCCCTCTTGTCACCACAGTCGCCCCACACGGCTCGCGTCACTTCTGGGAGGGGGCGTCTCTCCCCACGCGGCGCGTACTTCCGCCCGCTCCTTCAGTTGTTGTTCTAACCCGAGTGAAGCCACTTCCGGCTTTCCCCGACGCCTTCGGCAGTTCTCTTCCGGGTGGTGGCGGGCGGGTGGCCCGGATGTAGCCCTGGTGAAAACCTCTCCTTTTCTTCCCCCACCTTTCCTGGATCCTTAGTTTGGAAAAGCCCTTCTGTCCAGTCATGCCAAAGAGGAAAGTGACCTTCCAAGGCGTGGGAGATGATGACGAGGATGAAATCAGTGTCCCCAAGAAAAAGTTGGTGGACCCTGTAGCTGGGGTAGGGGGTCCCGGGAGCCGCTTCAAAGGCAAACACTCTTTGGACAGCGATGAGGAGGAGGAGGAGGAGGAGGAAGGGTCCAGCAAATATGACATCTTGGCCTCAGAGGATGTGGAAGGTCAGGAAGCAGCCACGCTCCCCAGTGAGGGAGGTGTGCGGATCACACCCTTCAACTTGCAGGAAGAGATGGAGGAAGGCCACTTTGATGCAGACGGCAACTATTTCCTGAACCGGGATGCTCAAATCCGAGACAGCTGGCTGGATAACATTGACTGGGTAAAGATCAGGGAGCGGCCACCTGATCAGCGGCCACCGTCAGACTCAGAGGAGGAGGACAGCCTGGGCCAGACACCAATGAGCACCCAAGCCCTCCTGGAGGGCCTTCTGGAACTGATGTTGCCAAGAGAGACAGTGGCTGGGGCACTGAGGCGTCTGGGAGCCCGAGGGGGAGGGAAAGAAGGCAGCAAGGGGCCCGGGCGGCCCAGTTCCCCTCAGCGCCTTGACCGGCTCTCCGGGTTGGCCGACCAGATGGTGGCCCAGGGCAACCTGGGAGTGTATCAGGAGACAAGGGAACGGTTGGCCATGCGACTGAAGGGGTTGGCGTGCCAGACCCAGGGACCCCGTGACCCCACACCGCCCCCCTCCCTGGACATGTTTGCTGAGGAAGTGGCGGAAGGGGAGCTGCAGACCCCAACCCCTGCCCAGAGGGAAGAAGTAGAGTCACCCGGAGATGGTCTGGCGGATGTGATGTGGGAGTATAAGTGGGAGAACACAGGGGATGCTGAGCTGTACGGGCCCTTCACCAGCACCCAGATGCAGACCTGGGTGAACGAAGGCTACTTCCCAGATGGCGTTTATTGCCGGAAGCTGGACCCCCCGGGTGGCCAGTTCTACAACTCCAAACGGATTGACTTTGACCTCTACACCTGAGCTTCCTGAGGGCCCAGTTTGGTGGTCCCTTCTTTGCTGGACTCTGTGGAGGAGGCCCCAGCTGCCTCAGGCAGTGAAGATGTTGGGGGCCACTTTTCAGTCAACTTCCTTTTCCCAATAAAAGCCTTTAGTTGTGTATTAGGGGCCTTGGCTGTGCTGATGGCCAGAAGCTGGAGCTGGGAACCTCTTCCGGGTCCCTTTGGACTTGTTCTTGCCCTTAGTGTTTCCTCTCATGAATTTCCTCCTTGCGAGTTTCTCTCTGGTCCCTCGAACCAACTCACCTTTGTTTCCCACTCCTTGGGGCAGAGCCGGGCCTGTCAGGTGTCCTGTGGCCTCCCAATCCCGACTTTGTTCTCAACTGAAAAATCTCTCCACTCACATGCTGTTCTCCAGAATCCCCTGGGGGTTCCTGTTTTGCTGTTCTTAGGTCTTTGGCTCCTAGGACCAAAGATGTTCTGCTTTGTAACCAATATAGGATAGAGCCCCAGAAGTGGAATCTTGAGGCTTGGATGGGCGGGGACATCTGTTGGGAGTGAGCACAAAGGCTGATGCTCACTGGCTTGCTCCCCACTGTCTCAGGTTTCTTAGAAGCAGATAGAAATGGTCTCTGAGGTAAAGTCTAAACTCATTGTTGGCACCTAAAGGACTTTCAAGGCCACCTGGGCCAGTCTGCACAGGCCCAGAGATGGGCCGTGTCTCGCGGAGGTTACACAGTGAATCAGAGGACTGTCCCCGACCCAGAGGACTCCCTTTGAAGGCCTTTCTGGGCACCAGGCCTTTTCTGAATGGCCTTGGAGTCTGTGCAGCTTACATTTCCTGGGCTCCTATAATATATTTGACTCAGTTTAGTTCCTTTAGGAAACTGCGAGAACTGGGCTGGTCCTCTCCATTCAGAGTGCGCCTGGGGAGGATTGGGAGGAAGACTGATAGGTGTCATTGTGTAGTCTGGACCTAACACTTTCCACCTACCCCCGGTGCTGCCTCATGCCTCTCCTCACTCACACCAGTTAGTCCTCCACCTGGCTCTCTGATGGAGTCTATGGGAAACTGTAATCTCACTCCTCAGACATTATGAATGATTGGGTCTAGGGATAGCCTGGGTCTTTGAAAAACTCCCAGGTGTTTCCCATGTGCATCCAAGTGGAAAACCACAGGCCCAGCTCGAGGTTACACCTCGGGAGAGGGGCCGGTTCACGGACCAGTTCATGTGTTAGAGTTGAACATGGGTGTGGCCAAAGTTCTGGTGGCCTCGGTTAGCCAAGAGTCGAGCAGCAGAGCCATGGGGCAGTGGGCATCCTGGGGTGGAAGGAGGCAGGCCCAGAACCAGGAAAGGATGGAGGGGCTGGGTGGGGATACTTGATTCTCTGGTGAGGCAGCTACCTTCTGTAATTAATGTCTATAGCAGTGGGGCCCACACTAGGGCTCCATCCAGACCTGGATTTCACTGATTTCAAGATACCTTCAGTTGTAAGATGTCTTCATGTGTTAGAAAGAAAACCCTGCCTGTTGCGGTTGTAAGATGTCATTGATTCAAAGCTGCATCCTGATTGCAGATATGTTCCAAAGTGAAAAAACAGATGTTTTAGAACCAATGAAATACAGTATTCACATTTATATCTCCGGTAACTGACTCATGGGAGGTGTGTAGTGTTTGGTGAATAGATGGAAGCCAAGGGGAAGTTCCCCAGATATCCTGCAGGCATCCCAGGCTCCATCCAAAGCTGAGGACACATCCCGTCTGTGTTTACATCCCTGAGGACAACAGGTGTGGGCAGATTAATGGCCCCCCAAAATGGCCACATCCTAAGCCTCAGAAGTTGTGAATGTATGGCTCTCTGGCAAAAGGGAGCTTGCAGACACAATCACGTTAATGATGTGTCCTGGATTAGTGAGGTGGGCCCAGTATGTCCACATGGGTCCTATTAAGTGAACGGGACTGAGGAGGGTCCAAGTGAGCAGGAGGTGAAGATATTACACCTGCTGCTGGCTTTGCAGTTGGAAGATGGGGCCAGATACCAAGGAATGCAGGTACCTGTAGAGGCTGAAACAAAGAAACGCAGCTCCACCATGGGTTTTGGCCCAGTGAAACCATTTGGGACTTTTGACCACTGCTAGAACTAATAAAATTGTGCTGTGATAAGTTTGAGGTCTTGTGTTAACAGCTTCAATAGGAAACTAGCACTCCATCCAGCTGAATGCCTCTCCCCATCTTAAACCTCACTCAGTTCTTCATTGGCCATGTCCCTATTTCAAGCCCCTATCAACACTTAACTCCCTTGCCTTAAACCAAACAAACTGTGTATATATATGTGTGTGTATATATATATATAATTTTTACATGTGAGTATATAATATTTTTTGCCACACCCCACAGCATGTGGGACCTTAGTTCCCTGACCAGGGATCGAACTCACGTTCACGCATTGGAGGTACAGAGTCTTTTCCCTGTTTTAATTTTATTTATTTTTGGCTGCACTGGCTCTTCGTTGTTGTGTTTGGGCTTTCTCTGGTTTCAGTGGGTGGGGGCTACTCTTTGTTATGGTGCACAGGCTTCTCTTTTTGCAGAGCACAGGCTCCAGGGCACTCAGGCCTCAGGGGTTGTGTTTTGTGAGCTCCAGAGCACAGGCTCAACAGTTATGGCACAGGGGTCTCCACTGCCCTAAAGCATATGGAATCTTCCCAAACTAGGAATCAAACCTGCATTGTCTCCTGCATTAGCAGACAGATTCTTAACCACTGAAGTGCCAGGGAAATCACTATATAATTTTTATATAAATAAGCTTTTTGTATCTTACAGTTGTTTTGTAGATTTACAAAAATATCACAGAGCATACATCCAGTTTCCCCTATTGTTAACATCTTTCAGTGGAACATTTGTTAACCCATGAACCAATGTTATTACTATTTTTATTTTTTTACTTTTTGTTTTCGACATTACTATTTTTAAATAGCTTTACTGCAATAGAATCCACCCACTTAAAGCACCATTGTGTTTAGTACATTCACAGGGTTGCGAAAGCATTGTTACAACCTCATTTTAGAATTTTGTCTAAAAGAAACCCCACTCGGCAGTAGTTCCTCCCCCATTTCTCCCCATCCCCACACCCTCCAGCCCCTGCGAGCCTCTAACCTACTTCCTGTCTCGAGATTTGCCTGTTTTGGGCATTTCACACAAATGGAATCATCCCGTATGTGGTCTAATGTGTTTTCTGTGTGTGCTTCTTGTACTTGGCATGTTTCTAAGATTCATCTATGTAATGTATAATAGTACCTTTATTGTTGGGTAACATTCCATTGTGTGGATGGATTAAACTTTTATTTATGTTTTACTAACTTTCCGTAACATCCCTCTTCTGTTTCAGAATCCTGTCTGGAACACCGCGGTACATTTAGCTGTCCTGTCTCCTTAGCTTTCTCTGTTCTGACTGCTCCTCCGACTTGTTTTCACTGACCTTGACCAATTTGAGGAGTGCTGGTGTGGTTTTTGGTCAAATTCCTAAAATTTGGACTTGTCTGAAATTTCCCCTATGATTCATCCCCATTGGGTTATGGGTTTGGAATAGGAAGTCAGAAGTGAAGAACCTTGCCTTTCACTGAAACTTTTAAGTATTTACATCTTTTTTATGTTATATAAATGGAATTGGTTTTTATCTATCTATGGCTATGCTGGGTCTTCATTGCTGTGCAGGCGTATCTCTAGTTGTGAGCAGGGTGCTGCTCTCTAGTTGAGGTGCGAAGACTTCTCATTGCTGTGGCTTCTGTTGGTGTGGAGCACAGGCTCTTGGACAGTCAGGCTTCAGTAGTTGGGGTGCACAGGCTTGAGGGCACAGGTTCAGTGGTTGTGGCGCACGGGCTTAATTGCTCCGCAGCATGAAGGATCTTCCCGGCCCAAGGATTGAACCCGCATCTCCAGCATTGGCAGGTGGATTCTTTACCACTGAGCCACCAGGGAAGCCCCTCAC EMBV3_29322 TGGAAAAGAGCGACAAGCACTGGGCTTTGCGGCTGCTGGCGACTTGTGGCTTGAATTAAA Gene GeneID:510909|STX6:NM_001082431:20_cdna Constitutive 2 NULL GeneID:510909 16 GENE STX6 MGC151807 syntaxin 6 EMBV3_42320 CAACCACACCGATCATGGCGGATCTGCTGTCTTGATTGTCATCTTGACTTTGGCATTGGC Gene GeneID:539754|UBE2J1:XM_002683690:5_cdna Constitutive 0 NULL GeneID:539754 9 GENE UBE2J1 NULL ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) EMBV3_39565 TTGCAGAAGACATCATGGAAGAGGTGGAGGTTGTGGCAGATGAGGAGCAGAAACAGTGGT Gene GeneID:787304|LOC787304:XM_002707896:2_cdna Constitutive 0 NULL GeneID:787304 19 GENE LOC787304 NULL similar to testis-specific protein EMBV3_27973 AAGAGTTTCGCTTAGGTGGGTTCTAGCTATGCTGTCCTTTCTACCCCGCTTGCCTTGAAG Gene BVV0102_238741 + 0 NULL GK000028.2:45136604-45410675 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20799 CGTCCCTCGGCTAGATATACTGTTGCCATGTAATCAGGGATCTGAGGCTTGAGAAACAGG Gene BVT0102_008074 - 1 EMBV3_22739 GK000018.2:15499378-15539799 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42309 CTTGTGCCTGGGAGGTTGTCAGAGCAGAAGTCATGAGAGCCTTCTCTTCCTCAACAAACT Gene GeneID:515951|IFN-a:NM_001017411:83_cdna Constitutive 0 NULL GeneID:515951 8 GENE IFN-a IFNaA interferon-alpha EMBV3_43244 CTGATTTTTGGCTCCCCAGTCATTTGCACATTAACAAAGCACTTATATTTGCTAGATCTG Gene GeneID:518225|CNOT6L:XM_002688375:224_cdna Constitutive 2 NULL GeneID:518225 6 GENE CNOT6L NULL CCR4-NOT transcription complex, subunit 6-like EMBV3_34928 CGGTTTACGTGTTGCGACTGTCATCACAAATGCGGGGCTGCTATTCGACAAACCAGTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39462 TGGCCAACACCTACCTGCTTGTTCCCCCTGTGCTCAACCCTATTGTCTACGGAGTGAAGA Gene GeneID:526623|LOC526623:XM_002693385:15_cdna Constitutive 0 NULL GeneID:526623 15 GENE LOC526623 NULL similar to olfactory receptor, family 51, subfamily E, member 1 (predicted) EMBV3_23251 GCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAGCCCTTGATTAA Gene GeneID:780777|CTNNA3:NM_001079638:414_cdna Constitutive 0 NULL GeneID:780777 28 GENE CTNNA3 MGC152098 catenin (cadherin-associated protein), alpha 3 EMBV3_32398 TCAGGAATACCTACTTTAGGAGCTTGGTGGTGTTGTCCTGTGGACTCTTGATATGCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37316 TAGCCCCACAGGCAGCTGGTATTAGCTCGGTGTCAGCGTAACTGACCCACTGTTGGACCA Gene BVT0102_266900 + 0 NULL GK000023.2:27344480-27355792 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132870 TCONS_00132871 1 XLOC_080904 Coding TCONS_00132870 XLOC_080904 Coding Coding - 23:27345534-27348241 - TSS99321 957 1 TCONS_00132870_2 236 5 0.648189209164819 0.00074104724027677 0.00032358373488003 0.000221577635819841 0.000707313350522075 0.00170361993809194 2.00927777055917e-05 0.000396512601730025 0.00056814518186412 0.0002946340106956 0.000175883780396807 3.70421828617962e-05 6.08188821222637e-29 0.000145529347920813 9.70905404542715e-05 2.45809444121722e-09 0.00102353084480909 5.35676004037852e-28 2.36320932367178e-23 0.000244386289076371 0.00039038292683729 0.00143852178965823 0.000558036885055417 0.000422190431345059 0.000842314815634774 0.00267947319697686 0.000522442926396465 0.000776159724984862 2.18900108179115e-13 0.000207226059699136 2.50862915051703e-07 XM_581858.7 VARS PREDICTED: Bos taurus valyl-tRNA synthetase (VARS), mRNA. 0.0 1606 100.00 0.928944618599791 XM_005249362.1 VARS PREDICTED: Homo sapiens valyl-tRNA synthetase (VARS), transcript 0.0 1139 86.60 0.996865203761755 TCONS_00132870_2 sp|P26640|SYVC_HUMAN SYVC_HUMAN Valine--tRNA ligase; 8e-145 440 93.62 0.991525423728814 2 coding 0 0 0 0 0.0281324210676627 0.848581780259022 0.0454376048216329 0.450919018782204 ACCCGCGGGCCCGGAAACGCTCGCAGTCACAAAGGGGGGGACACGTGGGCGCCGACGGCCCGGGCGGCTGTCGCAGGGAGCTAGGGTCGCCCAGAGAACCGCCCGCCGTCCCTGGTCGCCGGATTCCTCGGCTGCAGCCGCCAGGCCAGTCCAGCTTCGGCCGGCGCCCGGCTATGAGGTGGATGTCCGGCTCAGTGTGACCACCTCCCTCCAGGTTTTTCTACCGCGTTCGGACATCCCGCGTAACCATGTCCATTCTGTACGTCTCTCCTCACCCCGATGCCTTCCCCAGCCTCCGAGCCCTCATAGCTGCTCGCTACGGGGAAGCTGGGGAGGGTCCGGGATGGGGAGGAGCCCACCCCCGCGTCTGTCTCCAGCCGCCCCCCGCCAGCAGGACTCCTTTTCCTCCACCCCGTCTGCCAGCCCTGGAACAGGGTCCCGGTGGGCTCTGGGTGTGGGGGGCCACGGCTGTGTCCCAGCTGCTGTGGCCAGCAGGCCTGGGGGGTCCCGGGGGTAGTCGGGCAGCCGTCCTGGTCCAACAGTGGGTCAGTTACGCTGACACCGAGCTAATACCAGCTGCCTGTGGGGCTACGCTGCCGGCCTTGGGACTCCGAAGCTCGGCCCAAGACCCTCAGGCTGCACTGGCGGCCCTGGGCAGAGCCCTGAGTCCCTTGGAAGAATGGCTTCGACTGCATACCTACCTGGCCGGGGAGGCCCCAACTCTGGCTGACCTGGCAGCTGTCACAGCCTTGCTGCTGCCTTTCCGTTATGTCCTGGACCCCTCTGCCCGCCGGATCTGGGGTAATGTGACTCGCTGGTTTATCACATGTGTTCAGCAGCCAGAATTCCGGGCCGTACTGGGAGAAGTGGTTCTGTATTCAGGGGCCAGGTCTCTCTCCCAACAGCCAGGCTCTGAGGTCCCTGCACCCCCCAAAACGGCTGCTCAACTCAAGAANN TCONS_00132864 TCONS_00132866 TCONS_00132867 s 3' 1052 TCONS_00132864 TCONS_00132866 TCONS_00132867 s 3' 1052 EMBV3_26226 CCATACTTTGTACTGTGGCAAGGGTGTGACGTGGTGTTAACCTTTTTAATTTTTGAATCC Gene BVT0102_081151 + 0 NULL GK000030.2:132063582-132075496 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00254348 1 XLOC_157281 NonCoding TCONS_00254348 XLOC_157281 NonCoding NonCoding - X:132068629-132070751 - TSS191569 2122 2 TCONS_00254348_2 62 1 0 6.41172727275883e-05 0 0 1.56534128526558e-05 0 3.37139759911437e-06 0 0 2.60277008559643e-05 3.87793578374138e-06 3.23635945946735e-06 1.68505559307237e-06 0 0 0 0.00120731728335325 0 0.000910459525650723 3.37931745086405e-06 0 0 0.000538540597683989 0.000151315701754958 0.000229111409863192 4.24460046686639e-05 0 0 0 0 2.83329639702605e-05 XM_005274584.1 CDKL5 PREDICTED: Homo sapiens cyclin-dependent kinase-like 5 (CDKL5), 0.0 2278 84.29 0.997643732327992 0 noncoding 0 0 0 0 -0.00388595648280483 0.979543087063314 0.0556666004814206 0.320274943691656 GGGGAAAAGCTTTATAAATACAAAAAAATTATCAACATCAGTAAATAACAGGATTTGCCCTGCTTTACAATAATTTCTGTCCCTTAAACTGATTCCAACTTCAAAGACCCATTATCCTTCATTTGAATTCAAACGAGTTCTTTACAAAGAAGGAGTGACCGCGGAGCTGCTTGCTGTTCAAACAAGAGGGACCACAGTGCTCACGATGGGGATGGCCTGGCAATCACATCAGTCAGTGCAAAATCTGCATTTTATTAAAGACATTTGGGAAGGTCCATTCAAAAATACATTGTGCTCAGTAAAAATTAACCATTTCATGCTGATAATTAAGGTTACCACGGAATAGATATTTGTATAATATTTACAGCAACAATAGAAATTTTACAGAAGTTTAGAATGGAATACATGCCAGAAAAAACTTGATAAGATGTACCAACACATGATACAAAGAGTTATATAAACACTTTACAAATGGTACATAATTAGCTTGTGAGGAATTTAAATATTCAACACTTTAAATTCAGCTTGGATTCAAAAATTAAAAAGGTTAACACCACGTCACACCCTTGCCACAGTACAAAGTATGGAATTACACTTTTTATTATGGATTATAAAGTCTGTGCAATTAAGAATTTCAACTGATTCTTCATCTACCACAAATTTAGATGTTACATCACTCTGGCTTATCCCTATTTTTGTTTTCAGGCACAAGCAGGGTTTTCAAAGTCTCCCTGCCCTGTGTCTTCCCAGATACCCACTTCAAACTTCCTAGAGATTGAAGAAGCTCAGAATAGTCTTCTAAATATATACAGAATAACTACCTGAATTCAAAATGGCACAAAGCAATTCTTGGAGATAGGAATTAGGGGCAACTATTTTGTTTGGTTTGTTTCTGTTGATGAATCCACATTTACGTGAGAATTTACTTCTTACAATCACAGCATTACCCCTCCAGCCCGACTCAATCAGTGACCAAGGAGGAAACAAGGAGAGGGAAATGAACTGAGTTGACTATAATCAATTGTATATTAATACTTCTAGTGAAAACAGATTTTATACAAGCTTTACTTTCCATTTTGGAAAATCTAAGCTGTAGAGAACTTAAAAGTTCTCCAGAAGGAAAAGCATCTTTTTTTTTTTTTTTCCCTTGAAACTGAATGTGTTATAATTGGAGCTTTTGACAACTCTGGCAATAAATACTTTAATCCCCAAACGGGGACAAAAGTCAAGGCATCTACCTTTTCTATTCCTGGGTTTTGTCTGATTAGCCCTGAAGCAGAGCACTGGGACAAACTTGTCTATGCCTGAAATGAATCACATCAGGCTTTTGGGAATGTAAAATCCCAAACCAAAGGAAGTCCTGAGGAATTCTTAGCAGTCTGTCAAAATGGAGGGGATGGAGGAACAGATAAGGCCTCTTTCTCCCTGATACTCTGTGCTGGAAGAGTAGCGAACAAGGCAACTTCTAATCTGCATACAACATGGAGACCGATTTTTAAGATTCCAAAGGAAGATCAAAATACAACCCAAGGATCAAATGGGGTTCAGAGAGCTTAACCTTGTGGGTAATGAAGGGCCTTAGAAGAGATACCAGTTTTACTGCTGTAGTTCTCTGGCCCTAGAAATCCAACGTGTAGACTATTACAAATTTTTTCTGGCAAAATAAAAGACAAACCTCCCTCAAACTTGGGAGTAAACAGTTAGTGAATGAAAGTACAAGGCAGGTCGTGATTATATTTAATACCCTATAGGAAATACATAGAAAGGTGGATCAATGCCTGGAGTGGAGAAAGGTAGAGTCAGGACCAGGCCAAATGCTGATGTATTAACAAAGCACTATGGGAAATGAATATTCATGTAGTAACTGACTTGGCACAAAATTCTATGACTGTTTATAGTACATTCAGTTAAAAAAGAAGAAATAGAATAGAATAGGGCAGCAGGCCCACAGTTTTCTAGCCACTTTACTACTATCACATTGTGTGTATACAGAAAGACGTCGGACTCATCCTGTCATGAATTCACTTTCTTGCATTTACTAGTGGTTTCTAAGACAGTATTTTTTACCCAGCTGAATCAGACCTCAAGATATTCTGCATCTCAGCTGGTCAAGACGCAAAAG TCONS_00248358 TCONS_00248359 TCONS_00248360 TCONS_00248361 TCONS_00248362 TCONS_00248363 . 3' 174 TCONS_00248358 TCONS_00248359 TCONS_00248360 TCONS_00248361 TCONS_00248362 TCONS_00248363 . 3' 2295 EMBV3_10945 GGGGACTTCGGGGATCACCTTGTGCAGTGAGGTCTATCTAGCCTTTGATCTTTAAATAAT Gene BVT0101_077008 + 0 NULL GK000009.2:19035861-19327495 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04839 GAGGAAAGCTGTCTCTGCCTCACAGCCCTGTTTGGATCCCTGGACTTTGGACTATGACAT Gene BVV0102_236228 + 0 NULL GK000028.2:30166318-30168210 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02771 CCTGGCAGAGGACAAGTCTTTGTTGAGTATGCCAATGCTGGTGATTCCAAAGCTGCTCAG Gene GeneID:538770|UHMK1:XM_002685845:373_cdna Constitutive 0 NULL GeneID:538770 3 GENE UHMK1 NULL U2AF homology motif (UHM) kinase 1 EMBV3_12857 GCACATCACCCTCATCAGAACCTGATTGCTACTTACAGTGAAGATGGACTGCTAAAGCTC Gene GeneID:540842|SMU1:NM_001038573:17_cdna Constitutive 0 NULL GeneID:540842 8 GENE SMU1 MGC134177 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) EMBV3_29651 CTAAGATTACAAGACTGGGGTTGGTGGCCTGAGCAGGGGGGTGAATTACCTCTGAGCAAA Gene GeneID:617927|SNTB1:XM_002692812:133_cdna Constitutive 0 NULL GeneID:617927 14 GENE SNTB1 NULL syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) EMBV3_23875 ATTCACACAAGGGTGAAAGCTCTTTCAGCATCCTGAACATTAAGAAGCCTTCATCCACGC Gene GeneID:784893|ZNF248:XM_002698826:60_cdna Constitutive 0 NULL GeneID:784893 28 GENE ZNF248 NULL zinc finger protein 248 EMBV3_22204 ACTCTTGAAAGAACAATGGGAATCCAGTAAAAATGTGCCCGGAGAGGACTGCAGGTTCTG Gene GeneID:507595|C17H12ORF65:XM_002694475:311_cdna Constitutive 1 NULL GeneID:507595 17 GENE C17H12ORF65 NULL chromosome 12 open reading frame 65 ortholog EMBV3_15233 CTGGCTTCCCAGGTGGGCCTACGTACTCAGGTGTGATTGACGACCGGGGCAAGTTCATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33932 TCTAAGAGGACATTTTTAGATGATGGTTCGGAGGCTCTTTCCCCCACTCGACCCAGAGCT Gene GeneID:282319|PPP1R8:NM_174582:33_cdna UTR3_Alt 3 NULL GeneID:282319 2 GENE PPP1R8 NULL protein phosphatase 1, regulatory (inhibitor) subunit 8 EMBV3_39741 CTCTGAGGCTGATGTCTGGGAGTTCCTGAATGTTCTGGGCATCTATGATGGAAAGCAGCA Gene GeneID:786836|LOC786836:XM_002707866:2_cdna Constitutive 0 NULL GeneID:786836 X GENE LOC786836 NULL similar to melanoma antigen family B, 2 EMBV3_33719 CGACGGCGGCGGTGGCCGCAGCCCAGGAAGTGGCTACTAAATGCTTGGTGATGAAGGCAG Variant GeneID:514039|EPCAM:NM_001035290:104_cdna 291^398 1 EMBV3_38272 GeneID:514039 11 GENE EPCAM MGC127627 TACSTD1 epithelial cell adhesion molecule EMBV3_25786 CATATGTGCTGTGGATGGTGCGCTTGCATTTTTGGTTGGCACTCTCACTTATCGCAGCCA Gene GeneID:533233|APC:XM_002690404:66_cdna UTR3_Alt 2 NULL GeneID:533233 10 GENE APC MGC140121 adenomatous polyposis coli EMBV3_15404 CATACCACATTACCTAAAACCCATTCTATCCTCGTATTTCCCCACATCCCCCTTAATGTC Gene BVT0101_058626 + 0 NULL GK000007.2:2165243-2184569 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214991 TCONS_00214990 TCONS_00214992 1 XLOC_130810 Coding TCONS_00214991 XLOC_130810 Coding Coding ZNF354C 7:2181378-2223660 j TSS160673 5328 1 TCONS_00214991_4 538 0.312875375375375 5 0.874104207563681 2.22886034213923e-13 3.56443610303716e-05 8.19618692347912e-05 1.22842709057195e-15 8.78188931272697e-28 3.80521468129727e-07 4.94139981980386e-06 3.77704556557724e-06 3.31722300857205e-22 6.72746822723148e-59 2.35009281364723e-64 2.43988961764463e-217 6.54342671341129e-148 1.07182034763094e-293 1.45485102112766e-169 1.09033318712712e-12 0.000302532700806104 0.000522568197382172 8.29464234885402e-07 3.38599422505489e-45 6.87410257023145e-152 7.44831869389658e-05 9.96941898691154e-05 0.000210992285748032 1.89365654792993e-05 1.17246835317108e-09 6.72216724333839e-07 4.49545369151189e-05 7.30789915468241e-07 4.07574792749724e-20 XM_601630.6 ZNF354C PREDICTED: Bos taurus zinc finger protein 354C (ZNF354C), mRNA. 0.0 4506 100.00 0.468656156156156 NM_014594.1 ZNF354C Homo sapiens zinc finger protein 354C (ZNF354C), mRNA. 0.0 2343 83.14 0.41234984984985 TCONS_00214991_4 sp|Q86Y25|Z354C_HUMAN Z354C_HUMAN Zinc finger protein 354C; 0.0 898 83.08 0.979553903345725 6 coding 0 0 0 0 -0.0326896765359351 0.828053229297565 0.0632597865301882 0.538943636093986 ATGCCGGGAGTCGTAGTTCTCCTGGGTTTGCGGGGCTGCAAGGAGGGCTCGCGGCTTTCTCGGGGCTCGTGGCGCTGGTGATCCCGGCTCTGCTAGGGCGGCCTACCAGGGACTGAGAACCTCTCGGTTGCATCTTTCGGTGGCAGTCAGAGCCAGCACGTGAAAACTGAGAAGGAAAGAATGGCCTTGGATTTGCTGCCTGCTCAGGTGACAGAGTCAGTGACATTTAGGGATATCGCCGTGCTCTTCAGCCGGGACGAGTGGTTGCACCTGGATGCTGCCCAGAGAACCTTGTACCGGGAGGTGATGCTGGAGAACTACAGCACCCTGGTCTCGCTGGGGATTCCATTTTCAATGCCAAAATTGATCTGCCAGTTGCAACAAGGAGAAGATCCCTGTATGGTGGAAAGAGAAATCCCTCAAGATACCTGCCTTGGTTTCAAGATATGGCCTGAAATAGAAGCATTGCCTCGCAAACAGGACATTTCTTCAGGAGAAACATCTCAAGGAATAATAATGAAAAACTCCATTAAGTTGGACATCAAGTGTGGAGAAGCTTTGGAATTTGAGGGCAGGACACAAGAGCAACAGAAAAAAACTCTCAGGCAAATGGTAGCCTCACAGAAGCAAACCATCAGTAGAACTGGAGACCAGACAAGTCTTGAATTAGGGAAAGGTTTATTTATAAATACAGTTCTTATTAGACAACAAAATGTTCCTACAGAAAGAGTACCCAGTGTATATTATACTTTTGGGAGAGATTTTAAACAGAATTTTGATCTAATGAGATGTTTCCAGATTTACCCAGGAGAAAAACCTCATATTTACAATGCATGTGATAAAAGCTTCAATCAGAGTCTTCATCTTATTGAACGCCAGAGAATTCATACTGGTGAGAAACCTTACAAATGTAGTGAGTGTGGGAAAACCTTCAGCCACAGATCATCACTTCTTGCCCATCAGAGAATTCATACTGGAGAGAAACCTTACAAATGTAATCAATGTGAGAAAGCATTTAGTAGCAGTTCAACCCTTATCAAACATTTGAGAGTGCATACTGGAGAGAAACCCTATCAGTGTAAGGACTGTGGTAAAGCTTTTAGCCAGTGTTCAACCCTCACTGTACATCAGAGAATTCACACTGGAGAAAAACTCTATAAATGTGGAGAATGTGAGAAGGCCTTCAATTGTAGAGCAAAGCTTCATAGACACCAACAAATCCATACAGGTGAGAAACCCTATAAATGTAGTGAATGTGGGAAAAGTTACAGCCAGTTTACATCCCTGGCTGAACATCAGAGGCTTCACACTGGAGAACAACTGTGTAAATGCTTGGAATGTGGGAGAAATTTCACTCGCATCTCAACCTTTATTGAACATCAGCGGATTCATACTGGACAAAAACCATATCAGTGTAATGAATGTGGGAAAGCCTTCAACCAGTATTCATCCTTTAATGACCATCGGAAAATTCATACTGGAGAAAAACTTTACACGTGTGGAGAATGTGGGAAAGCCTTTGGTTGCAAATCTAACCTTTATAGGCATCAGAGAATCCATACTGGAGAGAAACCATATCAGTGTAATCAGTGTGGAAAAGCTTTCAGCCAGTATTCATTCCTAACTGAACATGAGAGAATCCATACTGGAGAGAAACTCTATAAATGTATGGAATGTGGGAAAGCCTACAGTTACAGATCAAACCTTTGTAGACACAAAAAAGTTCACAATAAAGAAAAACTCTATAAATGGAAAGAATATGGGGTCAGAGATTTCTTAGAGGAGATAAGCCTATAAGGTTTAATTCATCTCTGAAATAATTTAAGGGTTCTCATTGGAGAATAATCAGGAGAATAATAAATAGGGCACAGACTTCTAATAGATCAAGTCTTTTTTTTACTTCTCTTAGAGAAAATATGCAAGTTATCACTAAGTAATGGTAAAATTGACCAACGAATATTAAGAGCACTGCCTTGTCAAATTTTATAAGAATCAGTAAATTTAAGGTTTCTAAAAACAAAAATTTTAAATTCACAGAAAACTGTAAAAGACCTAACTTAAAAAAATGAAAACAATGGAATATAAGTTTTATTTCTTTCATTAGACTTTGTTGCCTTTCTAACAGTAAGCTTCAATATGAATTTTCTTTTAAAGGCAGTCACTGAGTTATTAATAATGTGAGTAAGTGTGGGGCCATATTTTCTAAAATGGCAGATAGATATAGGACATGCTCTCTTTCATAAAGAGAAGCTAAAGATAAGAAGAAATTCTTTAAGTTTAGATTTTCACATGGAAATAATTAAGCTCACTTTTCATGAACTGCCTCACCAGCAATTTATATTTATAAATATACATGTATGTATATGTGTGTTAGTTTCTCAGTCATATCTGACTCTTTGCAACCCTGTGGACTGTAGCTCACCAGGCTCTTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTAGCCATTCCCTTCACCAGAGGATCTTCCTGGTCCAGGCTGGGTCTCTTGCTTTGCAAGCAGATTCTTTACTGTAGCCTGAGACACCCATGATAGAGATAAATGTGTGTATGTATTCATGTGTATATGTGCACACAGAAAGAGTTTTGGTCTATATTTTTTCAAAATTCTTTGATGATTAAAAAATGTGGTTTTATTACTTTAGAATTTAGTTTTGAAAATTAAAATTTTCCCCAATGGTGTCTCTTCCTTTTCTTTCCTTACATTATTTCTTAATTTGATATGGTTCTACATTACTGAACAGTCTTAGAGAAGTCAGTGTAAACTGAAGCAAGTGGAGAGACTGTCATGCAAATACTGTCTTGTGTGTTGCAAAAGGGATATATTTCCAGCCTCTGATTATATACCTGGTAGCTTATTAAAACCAGGAGAGATTTTAATTTAGTTAGTTATAGCTTTTCATTTTAACTAATGAAGAAATTGAGCTTTTTTAGTACAATTAAGACTAGAAGCTAGATCTTCAGCTCTGGTTTTCTGTAATAATTATAGGTTAATTTACAACTTCAGGCCCCAAGAGTCCAAGTCCCAAAGCTATTTGTTTTGTAAACTGGTTAGGCACAATTGCAGTAATTTAATCAGTTTTATTTTTATGTTTGGTAAGTTCCCTCAATTTTAACCTTAATAATTGACTTAGTCATGTTTTCCTTTTTTCTTATGAGTCCCTAGTTATACCTTCTTTTGTAGTAACTGTACTTAAATCCTAAAAGCTAGCTATAGACCAGATAGTGAAACTACATTTGGGGGGGTTCACATATAAAATTGCCTTTTTGTTTATGTTTTGTTACACATCTTTTAGGACTTCTTTTATGTGAAGTGATATATGAGTATCTTATTATTAAACATTCTAGTTATTGGTATAAATTGGTTATCCAAAAACATTCCATGTTTTGCAAAAAAATGTCATTTTCCCCTGGGCCTACTTCCTTCAGTATATTTACTTCACAGTGGATATCATTCATAAACTGTTCTATTAATATGAAAATTAGCTAGAACCCCCTGAGACATCTAAACTTTAAACTCAAGCATTCAGCATTTGACTTGTCTTAGCTCATTAAAAAGTATTTTCTTGGGGATTCCCTGCTGGTCAAGTTTTTTAGAATGTGGTGCTTTCACTGCTGGGGCCCAGGTTCCTTCCCTGGTCAGGGAACTACGATCCTTCAAGCTGGGTGTCATGGTCAAAGAAAGTGAAGTGAGGTGGGGGGTGTTTCTTACATATTCAAGTATATTTATAAGGAAAATGGGGCTTCCCAGGTGGCACTGGTGGTAAAGAACCTGCCTGCCAGTGCAGGAGACATAAGAGATGTTCCCTGGGTTCGATCCCTGGGTTGGGAAGATTCCCTGGAGAAGGGTATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCTGATGGACAAAGGAGCCTGGTGGGTTCCAGTCCATAGGGTCGCAAAGAGTTGGACATGACGGAAGCAACTTAGCACATAAGGAAAATGAAGCTTTTAAACCTCAGTTTTTCACATCATACAGAGCCATTTGCAAGATATTCTAGATAAAAACCCATTTGATTACCCAATAGCAGTATCCACACATTATGCAGATTTTGGTCTCTAAATGCTATTCCTCACTAAAAGGAAGTAGGGCTCCTTGGAGAAATGGCTGATTCCGTATGTTTGGAACAGGGAAAATGTAAGATATGTTTGGAACAGGGAAAATATAAGATATGCCTTGAATACTTTTTTTGTGAAACAAAAAAAGAACTCAAAGACTAAAGGGATAATGTCAGAAGGATGTGAGGGCCAATTTAAAGGAGCTCCCACTAGTCAAATTTAGCACAATTTGAACATCAAAAAGAATAATCACAGTAATTGGATATAACATGCTAAATAAAATGATCCTATAATGAAGAAATAGAGGAAAATAGAAAAGCTCTTTATATACTTATTTGGAGAATGTCCTCTCTTCATTGTACATGGTGTGATAGATTTAGAAAAATCACCATTTTACAACCCTTAATGTAATTAGGCACATTCAATGGATGGAAAAACCCTATTACATGAAAAAAAAATTAAACATTATTTACACGGTGTCAAGATCACAGATACCAATTACAGAGGAAAGATATGCCTTTATAATGGAGAAATCTGGCTGTTAAACTGAGTGTCTCTACCAGTGGAACAAGCTGACATGTGACTCCTGATGAGATGCAGTATAAAGTAAACATGATCATCCTGTGATGTATTCTTGGGGAAAAAATGAAACTCTAATTAAATCTCTTATCTAGACTTTTCTTCCTGTTTACCAGAAATACAAGAAATAGAATTACATAGTGAATTACATAGTGAAGAATTGGACAAGTCTAGAGTTTGAGTTATTGTACAAGATAGCTTGTCTGGACTTTTCAAGAAACCAATATAATAAAACAGGAGTGGAGTCATCTAGATTAAGAAACTTGAGATATAACCAAATGCAAGGTGTGATTCTTATTTGGCATCTGATTCAGAAAATCAAAACAACTGTAAGACATTAAGGGGGATGTGGGGAAATACGAGGATAGAATGGGTTTTAGGTAATGTGGTATGTTTAATTTTCCTAGAGGTATGATGTTGATGATGTTGTTGAAGTGTGAAGGACAGTACCCTTCTTCTTAGGAGATGCATGCCAAAGTTTTCAAATTTAAAGAGTCATGATGTTTGTAGCATATTTTAAAATAAATATGTAAAAAATTAGTCAGCTGTTGTTGAATCTTTGTGGGAGATATAGTATGTTCACTGGTCATTCTGTAAACTTCTGTAAAAATTTTTAATAAAAAATTGAAGCA EMBV3_05952 AGGCTCGCCAGGGAAATGTTCAATGAATTTGACGAAGCCCTGTTGAGGTTGGTTATCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01698 CAGTGGTTTCCTTAGCGGCTCAGCACAGTGACTGGATAGAATCGACTTTCAGCAGCAAGT Gene BVT0101_008679 + 0 NULL GK000002.2:94573688-94796433 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105889 TCONS_00105895 TCONS_00105890 TCONS_00105899 TCONS_00105888 TCONS_00105893 TCONS_00105898 TCONS_00105900 TCONS_00105887 TCONS_00105892 TCONS_00105897 TCONS_00105894 TCONS_00105896 TCONS_00105891 1 XLOC_062669 Coding TCONS_00105892 XLOC_062669 Coding Coding INO80D 2:94785607-94855043 j TSS78033 14052 1 TCONS_00105892_6 1026 0.0146598348989468 11 0.797782098365378 7.30908769047748e-166 1.4774517344022e-59 4.79080727199603e-23 5.24546109861769e-20 7.33265514789683e-15 3.15264221595258e-09 1.11165975619869e-200 0 1.69068289523608e-33 3.60229342442235e-53 7.09342353850655e-05 5.60544599037317e-08 2.80737519754923e-15 8.90686066755732e-06 1.7260389085972e-07 0.000267962911238153 3.78895692657531e-24 0.004632111444062 5.50790902603691e-62 7.00855772534253e-09 5.36113432141415e-28 1.46098801618699e-08 0.001152498069826 0.000746726445918865 8.80849009722576e-38 6.80702554006603e-10 3.18882386213192e-48 5.99777234028206e-08 6.73476868794539e-18 8.29186935132566e-28 XM_005202727.1 INO80D PREDICTED: Bos taurus INO80 complex subunit D (INO80D), transcript 0.0 6823 100.00 0.26914318246513 XM_005246658.1 INO80D PREDICTED: Homo sapiens INO80 complex subunit D (INO80D), 0.0 8868 85.16 0.552803871335041 TCONS_00105892_6 sp|Q53TQ3|IN80D_HUMAN IN80D_HUMAN INO80 complex subunit D; 0.0 1576 96.27 0.834307992202729 1 coding 0 0 1 0 -0.0203970238000323 0.915164937546046 -0.016481889292057 0.783483233843075 TGTTGCAGTGGGAAAGGGAGGAGACAATCTGCTTCATCTTGATTCTGCAGCATTCCAAACTGTGGTATCCTTGGGGTTCTCTTAACATTGCTATGGTGCAGAAGATTTAAAATCAGCTGATGTTCACAAGGAATAGAGTCACGTGATGTATGAAGGGAAACATATACACTTCTCTGAGGTTGACAATAAGCCCTTGTGCTCATATAGCCCCAAACTGTGCAAGCAGCGGCGACTCAACGGCTACGCTTTCTGTATCAGACACGTTCTGGAGGACAAGACTGCCCCCTTCAAGCAATGTGAATATGTGGCCAAGTATAACAGCCAGCGCTGCACCAACCCCATTCCTAAATCGGAGGACCGCAGGTACTGCAACAGCCACTTGCAGGTACTTGGCTTTATCCCGAAAAAAGAGAGGAAGAAAAAGAATGACCCTATAGATGAAGTCAAGGTCAGGCACCAGATGGATACCATGGCCTTTAGCCTGACAGTGCCCACGCTGGCCTTGAAGATGCCCAATGGACTGGATGGAATGTCCCTCTCTCCACCAGGGGCAAGGGTCCCTGTCCACTACCTGGAAACCGAGTTGGAAGACCCCTTTGCTTTCAACGAGGAAGATGATGACCTAAAGAAAGGGGCAACTGTGAGAAAGAAGTTGCAGAGCAAGTTGGCCCAGAATCGGCAGCGCCAGAGAGAGACAGAGATTTTAAAAGTTCGACAAGAGCACTTTAGTCCCCCTTCTGCCCCTTCTCAGCAGCAGCCTCCGCAGCAGCACTCCCACCTGTCACCTTTACCCACTTTAAAACCTCCAGCGCCACCGCAGGGTGTAGTCTGCAAGTCACCTCAACCTCAGAACACCAGCCTACCAATGCAGGGAGTGGCCCCCACCACACACACTATAGCACAAGCAAGGCAGTTGTCTCACAAGAGGCCTCTGCCCCTCCTGCCATCCAGTAGGGCTCCCGCCGTGGACCCGCCCAGGACTGACCGGGTCCTTATGAAAGCCACAGCCTTCTCTCCACACTTCTCTTGTATAAGTCGACTGCAGAGACTGGTGAAACTGTGCACCCAAAAACATCAGTTGGACACTGATCTGTTTCCCCATTTAGGGTTGGACTGGTCTGAAGAGAGTGGAGAAGAACTTGAGGACTCAGAGCAGGCCTCGCCATACCAGGTGGCCTGGTCCATCCGAGAGACCCTCAGATACGAAAGACACACGTCAGATGATGATGACATGGAGAGTAGGAGCTCCAGGGTGACCCAACTTTGCACTTACTTTCAGCAGAAATATAAGCACCTCTGCCGCCTGGAGCGGGCAGAATCTCGTCAAAAGAAATGCCGGCACACATTGAGGAAGGCCTTGCTGCAGGCGGCTAGTAGAGAACCAGAGTGTGCTGGCCAGCTGATCCAGGAGCTGCAGAGAGCTGCATGCAGTCGAGCCAGCGTAAGTCGGACCACGTTGAAGGAGATGGAAGCGGCAGCATGCAGTGGGACTGTGAAGGGCGAACAGTGCACCAACAAAGCCCTTCCATTCACCAGACATTGCTTCCAGCATATCCTCTTAAACCGCTCTCAGCAACTCTTCTCAAGTTGCACAGCCAAGTTCGCAGATGGACAGCAGTGTTCTGTGCCCGTCTTTGACATTACACACCAGACACCTCTGTGTGAAGAACATGCCAAAAAAATGGATAATTTCTTGAGAGGAGATAGCTCCCGTAAAGTTCAGCACCAGCAGCAGAGGAAACCCAGGAAAAAAACCAAGCCTCCTGCACTTACCAAAAAACACAAGAAGAAGAGAAGGCGTGGACCTCGTCGACCCCAGAAGCCCATCCCCCCTGCAGTCCCCCAGGGGAACCTCAGCATGCCCACCAGCGTCTCACTGCCAGTGGAAGCCTCCCGCATTCGGAGCCCGTCCACACCGGAGCTGAGCGCTGATGAGTTGCCGGATGACATTGCCAATGAGATCACCGACATTCCACACGACTTGGAATTGAACCAGGAGGACTTCTCTGACGTCCTTCCGCGGCTACCTGATGACTTACAAGATTTCGATTTTTTTGAAGGAAAGAACGGAGACCTCCTCCCCACCACCGAAGAGGCCGAGGAACTTGAACGGGCCTTGCAGGCCGTGACTTCTCTCGAGTGCCTGAGTACCATTGGGGTGCTCACCCAGTCAGATGGTGTGCCCGTCCAGGAGCTGTCAGACAGAGGAATAGGGGTTTTCTCCACAGGGACAGGAGCGTCGGGGATCCCGTCCTTGAGCCGAGAGGTCAACACGGACCTGGGGGAGCTGCTGAATGGGCGTATAGTCCATGACAACTTCTCTAGCCTAGAGCTGGATGAGAGCCTGCTCCGTTCAGCTACCTTGTCTAACCCACCTACACCCCTGGCAGGGCAGATCCAGGGGCAGTTCTCTGCCCCCGCCAGCGTCAGCCTTACTTCTGCCACTCTGATGAGCCAGAGTGCCCTTGGGGAGAGAGCCTTCCCAGGACAGTTTCATGGACTTCATGATGGCAGCCATGCCTCCCAGAGGCCACATCCTGCCCAGCTGCTGAGCAAGGCAGATGACCTAATCACCTCACGACAGCAATACAGCAGTGATCACTCACACTCCTCGCCCCATGGAAGCCATTATGACAGCGAGCACGTGCCGTCTCCCTACAGTGACCACATCACCTCTCCCCACACGACATCTTACTCTGGTGATAACATGGCAGCTACCTTCTCAGCAGAGATGCCCGTCATGGCGCAGCACTTGCTCCCGACGCCACTTGAGGTGCCACTTGGAGGGGTCGTGAACCCCAGAACTCACTGGGGCAATCTCCCCGTCAACCTCGGAGACCCCTCTCCGTTCAGCAACCTTCTCGTCGCCGATGGGCATCTTCTTTCCACGTCCCTCTCCACGCCGCCCACCACTTCGAACTCAGAGACCACACAGCCTGCCTTCGCCACCGTGACCCCCAGCAGCTCCAGTGTGCTCCCGGGGTTACCGCAGACCAGCTTCAGTGGCATGGGGCCTTCCGCTGAACTGCTGGCCTCCACCTCCCCCAAGCAGCAACTCCCTCAGTTCAGCGCAGCCTTCGGCCACCAGCTGAGTTCTCACAGTGGCATTCCCAAGGACCTGCAGCCCAGCCACAGCTCGATAGCGCCTCCCACAGGCTTCACAGTAACAGGTGCCACAGCTACAAGTACCAATAACGCATCTTCTCCCTTTACCTCCCCTAACTGAGCGTGTCTGTGTGTTTGCAGGCAGGTGGGGAACCTGGTGTTTTCTATCTTCTTTTCCCTCTTTATCACCCACCCCCTCGCCCCCTTTTCCTAAAGAAGATTTTAAAAATAACAGACGGGGACTAGAGGAGAACTCCCCTTTTCCAGTTAAACAAGTTCCCCCTGCGGTGGACCTCGCTTCAGTGTTCACATGTGCTCCTTGGCACTGGTGCTCGTTCCCTCCTGGCGGGTCCACCCTCCCCCCAGTGGTTTCCTTAGCGGCTCAGCACAGTGACTGGATAGAATCGACTTTCAGCAGCAAGTCCTAGAAGTGGAAGATACCTCAGATTACCAGTGCCCTTTACTATTTCTTAGTATCGTAGATCAATGCTTTCCATTCTAATACCAGGTCTTTACACAGGTGGTTCTAGCTAGAATGAGCCTGTTCATCGAGTTCTGTGTAAGAAATGGCAAATGGTGTGCAGAGGCAGATTCAAGCCTCTGTCTTAGCACCAACTGCTCAGCAAACACCACATGAGGCCAGGATTCCATTCCTAATTGTGATCATGTTTAATTAAAAAGAAAAAGAATTAGTCTTTTGACTGCCTGTGTGTGTGTGTGCACCCACGCGTGTATTTCTGTGCAGGGCAGGAAGCAGCTGTCCCATTGGTTTTTTTTTTTCTTATTTCCTAATAAGTAGAAGTCTCTTCTCCTTTCCCACATCTCAGAGCCCTAATAAGGTTGGTCGTTCTTTCCCACTGAGTTAGCCGACCTTGGTGAATGGAGAAGGGTGGCAGTCTGGTGGCGTGAGTAGCACAACCCTTTTCTGCTAAGTTAGCCCAGAACACAGAAAGCTGAATTCACATCAGTGCCCGGCGGATGTGGTGAAGAGCTTGGCCAGGACTGCAGGGGTTGCTGCAATTCTGAGGTCTGATGGTTGGTTGTATTGCCTTTTTAGACAGCATTTGTTTCTGAATCCCTCTTCCATGGAATATATTCACAAGATGTAATTAAAGAAAATGTTTTGATGTGAAAAGCAGGATAGTTCAAGATTGGTTTGGAGAGATGGGATCTGTGAACTCCTTGATCCATCTTTTGCTTTGGGATTTTTCATGTTTACAGTAGTGATTCTTTGGTAAAGTTTGTAAAATGTTGATGACACTTGTAGAATCAATGTACCAGTTGTGAAGTGACATGTAATATCTGAAGGATACACATTTTAAAATTTTCTTTCAAAGCAAAATATGGAAATTAGACATAAATCTTACTCACCCTTTGGTACTTTTAAAATAATTTTAAGTATTTAGGTTTAAGTTTGGGGAATTTTTTTGAAATACCAGATCTTGAAGGTTAAAAATCATATTGGATAGTTTAGTAAGTTGGTGACTATGAAATGAATATGTGAGGTTTCTTTTTAACCTGCCTTCTCCCTGACCCCCCACCCTCCGCCCAAGGGTGGAACTAGATTTTAAAGGCATCTGTTCTCTGCTTTTGCTGAGAAGTTTCACTGTCCCTTGAGATACCATTGGCTATTTATACCTGAATCTAGTCTAATTTACATATATATATTTTAAAAGATGCGTAGAGAGAACATATCTATTAATGATGTGATATAATAATTCATTTGTCAGGGAATATTTGATCTTAATTCCTTTTCAATAGGTAAAGATTTGGATGTATTTTCCTACTTCCTCTATGTATTTCTCTTTATGCCATGCTAATTCTAACCAGTCCCTTCTTTTGAAAGCTTTTCTTTCTCTGCTTTTTAAAGGAATGATGGTGATCAGCAGGCATTATGCAGATACCACGTGCCTGAGATTATGGAGGGGAAATGTCACATGACTGTATGAAATCATGATATGCCCTATTTTGTATTTATTGAAGTTTTCTTTTTGTGGGCCAAATATATGTTTGTAATATATTTAGGTTTTTTTTAATCATGATAATTGATTGGAAGATTTATTTTTTAATAGCTTTGCCTTTTTTGCAGATTGAGAAATTTCTAAATTATAAAATTATGTCACAAAGCAAAATTATATTTGGTAGCACCATAAATTTTTATTCTGAATGGTGAGAACAGATAATCTGAGTATTTCTCACCTGTGAACCTATGTTAGTAAGCTTTTTAATTTTAATGTACTGTAATGAAATGATTATGAGTAGTTACCTCTGCTCAAAAGTGTCATTTAGTTCACTGAACTCTTCACATCCCATTATAACCATCACATGCTAATTGTCCATTCTTAGTGATTCGATTCCGTCTCCACTGTGTACTAATCACAGGTTGTAGCAGAGCAGCCCATTGACTTTCTTTTTTACTGAACTAAAAGTGGTACATACACATTGACTTTCTTATCAGCCCTTCTTTGACAGTGAAGGGAAAGTCATGGGATGTTGATTTGAATTTTTCTGGCAATTTGTCCCTTGTGGTAGCTGCTTAAAATTCTTCAGTTATGGAAACTGAGTTTGCAGTAAGTTGCACATTTTATTGTTTGCAATTTTCTGTTTTCTGTGCATTTTTAAGCCCTTTCCTGCTTTCTGGTAAGGAGGCATGAAATGATCAGGAATGTTGCCAGTTACAGCTTCACACCAAAAACTTTTGAGTAAATTCGTTTTTGTGTAGATGCCCACGATAAATAGCTGAAGAAAGGGCACCCGTAGAAAGTACCTGTGTAGATTTAAGAAAGTAGCGAAAAAACAAATTTTTCTTCTCACTTTGTCTACTTCAAAATAAATATCCATGCTTGCGATTCACTTTACTCTTGCTGTTTCTTGTGAGTCCCTTTTTGGAAAGAGAAGAACATCTGTGAACCCAGAGATAACCCTTAGGTTGCTGTTTTAGCTAATGGAGCAATTTTACTCTCTTAGTAGCAGGTTTGCTATTACCATGGAAAGAAAGAAACGAAGTATCTTTTACTCCAGAAATAGGAAAATTAGTGTCTTTTAAAATAGCACTTAAGGCTCCAATAAGGCAATACTGGAATCAGAAACAAATTTGATATAAGGTTCTATCTAATTACGTGGATACTAGCTTTCATTTTAGTGTTAAAACTCAACTCATGAGAAATAATGGCAAAGAAGGTTCACTCTGTTTCTGCAGTTCTTTGGGACCATTTATAAAGGCCAGTTAGATCAGTTTACAAAGTTGCTGCAGTTAATGGATACATTCTGTGCTCTGAGAATCTGAATTCCATGCTAATGTATAATGCTCACTGGCTGTGATCTATAGCATCCGAAGGAAAGATGTGTTTTTCTCCTTTACACTCTCTACATAACTGTTAATATTATTTTAGTTAAAGTACTTAAGACATTGATTTTCCCCTGTAAAAATGGCTTAGCAATTTGCACATCTGGGTAGATTATGTAGTTAGTAAACAATCCGCAGTAGTAAATAGCAATTACATTTAACCCACCAAGTGACAGACTATGCAATGGAAAAATTTTCTAATTATCACCACATAGCTTATATGACAAAGGATTCTTTTCTCTAGTAACCTACCATGTGAACTAGAACTGTCTCATAAATGACTTCCTGAGCAATTTCATGTTGGCAGGCAGTGTGATGTGCCTAGAGTCCCTCCATGAAAAGAGTATAATTTAATGAGAAGCAAATAGTAGGTATGGACATAAAGTTGGAAAAACTTTTTTCTTTTCCTTAAAATCATAGTTATTGTCTTGAGTGGTTTAAGGCTAAAGAAAGCGAATACTTTATCTTTGCCAAATAATTATTTATAAGATTTATTTCTTAAATAAGCCTAATCTCTCAACTGCAAGTTAAGCAGCATCATTTTCTGTGACTAACACTAAAGCTTTTCCTTATCAGAGGTCGTTCGGTCCATGATTGTAATCCACAGAGGCAAAGACAGTGTCCATGATACACACAGCTGCCCTACCTGTGTGATTTTCTTCTTACCTGAAAAAAATATTTCTATTGATCCATACTACTGGGCTTTTATCATTTGGCAGTAGAATTTGAGCCTGTGTAGGTCACACCCATCCTGGAAGTTCACTGATACTTGCCTGCAGTCCTTCCTGTGCTCCTGCCTTGTGGGGCTGGTAATGGTGGTGGTAGCTTCATCCGCAGTGTTTGTGGGAGGCAAGTTGCTTTTTCTCCAAGTTAGTTCAAAAGGTTGCTGTGGTTTGGTATTGCAAAGAGCTGAGGCTGTTAATAACACTAAACTATCATTTCAAGCTAATAGGTTTCAAATTCATTTAAAATTTGTTTAGGTATTTAGTTTCTGGTTTCTTCATCTTTCTTTTTAGCCTTCTTTTAACACTCTTATTAAATTCTGTTTTTAATCTGGTGTATATAGAATAATGCAGTGGTTGTTTAAATGGTCAACAGAATTCTGCAGTTTAATGAGGCAATTTAAAGGATTCCCTGGAAGAAAGTATAGTCAGTCCGAATGTTTCATCGCAGACAGCTACGTTGCTCCAAGGACTTTTTGTCCTGCCGAGAATTATATTTGTTGGAGAAAGGTGAGTGTGGGAATATATATTGGACAGAACATAGATTTTGTTTCCCCCCCTCTCAATACATTGAAAACAACTGAATTTTAATGGGCATTCTATAGAAAAGTAAAACAATATAGTGACTGCTTAATACCGTGAACTTTATAAAGATTTCTAATATCATATATTGAAGTGAAGTGAAGTTGCTCAGTCGTGTCCAACTCTTTGCCACCCCGTGGACTGTAGCCTACCAGGCTGCTCCATCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTAGCTCCAGGGGATCTTCCCGACCCAGGGATCAAACCCAGGTCTCCCGCATTGCAGGCAGATGCTTTACCTTCTGAGCCACCTGGGAAGCCCAATATCATATATTAGAGGGACACAAAATCCATGTTTAGTTAATTAAAGCAACTTTTTTTTTATAATACTGTCTTTCAAAAGATGTGTAATAAAAGATCAGTGAAGAATATATTTGAATATCTCAAGTGTTTTTTTCTGATCAGTGAGTTAGGAAAGAAAACATAAAACATAAATGAGTAATTATGTCTCTTCTAATAACCAGTGTCATTAATGCAAAAATTGTGGGTCAGACTTAGCCTTATTTCTAAATAGCAAAAATTCTCTCTTTTTACTCCTACTCTGATTTTTTGTTAGCTTCCCTCTCTCTGCACTGTGATACAGAGCAAATAAAAGGAAACGTGGCATTTGATAGAGAGTGAAAGAGCAAATGTGGGATGACACCCCCTCCCCCCTCCAGGTTCCCAAAGCTTGGGAACGTTTGGCTACTTTGAATGGCAGCGTTGTGGCGGTCTCAAGTGCAGTCTGGGAAAACAGTCTTCTAAGAGAAAACCTGTCTCACTCTCAGCAAAGTAGGGGAGCACAGCTTTCCTTCCGTTTTTCCCTTCTGCCTGCTTGCTCAGCCCACCCCCAGCACTGAAGTGTGTGTACACACATACACGCATGATCTGTACTGCTCTTGGCCCAAGAGAACCTTTTCTTTCACTTGGTTCTTTTTTTTTAAGCTGGGGGCCACTGAAGTAAGCTCTATATGCACCCAAAGTTCCCCGTGGAAAACTTTTCAACATGCAGTGCAGAAGGCTCCAATGCAGTTTAAACGCCACCCTTGCTTTTACTTGGAGAATAGACTGATTTGCCCTGACCTGGCTCCACCCTGCGTCACTGAAGTACGGTTGGCTCCAGCTGATGAGCCTGGAAGGGATGGGAAGGTTTGGTACTTAGGACGTTGTCTTCATCTGCTCGGAAGGGTTGAATCAGTTCCTCTCAACAGTGATAATTCTTTTCACTGTATAGTGTTGAGTATGTCTCAGGGATTCCTTGTGGAAATTAGGGCAGTTTTTAAAATAAGAAATTAGTTTTAAAAGCAACTAAAGGTGACTCATCATTGAGAGAGCGCAGGAAAGAGAAAACGTTTGGTTTCGTAGCCCATGGTGTCTTGCTTGGGACGCTTCTCCTTCTCCTTCAGGCTCTCATCTCAGCCTCAGCATACAGAATCCTTTCCCACCACGCACAGCTTTAAAACTTTTATTTAAAACTTTCCTTCCCCAATGAGCTTTCAGAATACTTATTGTAGATTTTAAGAGAAAAGGTATATTAATTTATGCTATTAACATCACCTCATAAATTATAAGTTTTATACTAAAGCTGTATTGAGTGTAATGAATTATGTTGCCTATGTGTTTAATAGCTAAAAAATTATATATGAGCTTTTTTTTTTTTTTTTGACAAAACAAACTAGTGAAGCACCTTTTTACACTGGATCTCTGCCGTGTCAAGGTGTATAGCTATCCTTTGCTACCTTGCAGATATATAAAATAGAAGGATATCCTGGGGCCTCAAAATGTAGAACACCTTTAGACCATTTATTACTGTTCATAGAACCGTTGAGAAATCACGTTTCCTTAGTAAATGATCTGTGGTTTACACTTAAGATGGCTAGAAGCTTAGTTACAGGGTAAATAGAAATACATAGATCAAGTAAAAACTCCCAACTACTGTAGCTGGAATTTGTAAATTAAGTTTTTAAGACCTCTTTTATTTCCTATGGATTTATTCTTTTAATTACAGTTTATTCTGTAAGTTGGGAAGTCAAATAGGAAAAATAATAAATCTAGATGTTCTCAGTGTCTTATTCAGGAACTTTTTATCCCTCCTCACTAAGGAATTCCCACTGTGACTTAAAAATAGAATTAAAGTACTTGTGTGCATGTATTTGTCTGTGTTTTTACACACATGCAAAAATATACATTGGGGGCACGTGTATGAGAGAGATGAATGTGTGCTTACGTAAAAAGAGAAAGGCAACAGAATGTATGGTAGAAATATGATTTATTTAGTTGAGGGCGTTGGAGTTCCTTTCTCATTGTCTCTGTTGTATAAATACACCAAATTCTTGATTGTGTTATGTTAAAAGGCTAGCTCTGATATCATGTGCATTTTATTTCAAGCTTTTGATTAGCTTATGTTATGTTTTTAAAACAACACAAAAAACAGCAGGTTCTAAGACCAGCCTCTTGCTTTTGAGTGGAAAAATAAGAGAAAAACAGACCTGTACATGAGCTGTGTTTATCTATTGGGGTGGTGGGACCAGAGATCAGTTGAATCTTTTTTATGTTAATAATAGATTTCTTCGTATTCTGAGTTATAAAATATTATTGATCACCTTTTCTTGGTGAAATAAAGTTGAGGCCTTTTGTAAAGAATGCCATTTTTAAAGGGGCTCCTTTGTTTAAAGAGTTGGTGGGATCATTTCACCATGCACATTTCAAAGCTGGGTTGATTTCAGTTATTTCCAAATTTTTTTTTTTAAATTACTCAGTTGTGTTGTTATTTATGAAGTTAGCATGCCCCCAAACCACCATATTTTGGCTATAGGAAAATTATGATACCCTTGACTTTTTACCTGGTTTATATGCAATTTTTAAAAAATGCATTCCTGTATTTTGAGTTTTGTCATTTTGCTATACATTCATTACTGAAGTGTCTGGTGGTCTAAAATAGTCAAAGCTAGAGTTTTATTAAATGCTCCAGTCACATTTATTTTTAATATTAAAAAATCGTACTTTGAAACATGTTAAAACAACTTCTGATAAATGACGTCTGGATTTGTCGTTATCTTTGAAGCCTCATTCATTTTAGATATACTCAAGACCTAGGAAAGCTTTTTGTATGTTGTTTTTACAGTTGTATTTTTTGCAGCATCTCCCAGTTTCATTCACTCTTGCTTTATGGATTTTTTAAAAATCTGCGTATTTCTTGTACATATGCATGCAAATGAAAGAAGGGAGGTTGTATTGGTGCCATTTCTCCCTTCAGTTACTGGTTAATGGGATTTGCTAGAATAAATTCCCCTGATTGAAGGGTGAAGCTAAGCCCTTTTGTGTATATCTGTACAGAGATGTGTATATGGGATGTGGTGGCACTTTGCTGAATGTGAACTTGCCTTGTCGATGGAAAGATTGAGAAGTATTATGTTTATTTATACATTTGTATAAATCTATATATACACGTATGTATATGTGTGTGTATAGATAAATCTATATACATATATTTCCCTAAAAGAAAAAAAGTGTGTGTGTAACAGATAAACAGCCTTTGTTAAGCAAGATTATATATCTTTGGAGAATTGTGGATTATTCTATAAGCAAGAAGAGGGACAGTCTAGTGTAATTATCAGAGCATACAAAGATGGAAGTCCTTAGGATTATAGTCTTGTTTATGAATTCCTTTTAGAACTGTTCTTACTTGCCACTCCCACTATTCTTCATTTTCATGGACTTCTAAGTCAATCTCTCACCACTTAAAAATCACACTACTTTGTGTTTTTTTCTCCTTTATTAGGTCCTTTTTGCCAGAATCATTTGGCCTAACCATATTTCATTAACACTTCACTTGTCTCTGAAATTTCCCGGAAGACACAAATTTTGGCAATACTTTCTATGGTAATTTTGAAAATTGGGCATCATTTGTCTCAAAAACAACCAACCAATAAACAAAAGATCAACATTCAAACAGAACTACTTTGAAAGTTTTACCTAGTTAATTTGGGGATGTTTTACTTAAATTGGAAAAACATAATTGTGCTTTTATGATTGACATTAGTATTATATTTATTTTTTCATTTATTGTCACTAATTTGTCATTTTAAAATTTTGTTTTACTTTGTGATTGATCATACTTTTACCATTTTCATTTTAATGGAGAGCCTCTTGAATTCTATAACTCATTTTCTTCATGATGAAACTGCTTTAATGAATTCTGCTGTATTTCCTTTTGACTTTTCTCACATTTGTGACATTCTGTTTTAACTTTGCTGCAGCTCTCTAGAAAACTTGCATCCCTATATATTGTGCCTTTAAAGCTTTTATGCACACACAGACAGAAGTGTATATATACATGTTGGAGCATGTGTACATATACTTTCCTATATACTCACACAGTATGTCTCTAGTATATATTGTGTGAGTGAATATATAGATATTCAAAGGCAATGAAATGTTGCTCTTTAGATATATATGTATATAAATAGTGTTGATATATTGTATATACACATGTATATGTATGAGTTTTAAATGGCAATCTTTTACATTTAGCAAAATGCTACCCCTACTGGAATATTGTCACTGCGATAGCAGTTGTATGTAATGATTTAAAATAACATTATCAAAAGTTATTTAAAGAACATTTAGAAGTCTCATCTAAAGAGGTCCACACATTATTTATTTCTCCTCCTTTTATTGTTATTATTTTTTTTTAACTGAAAGGGAGACTGTCATTTTAAAAACGCCACCTATCCCGGGAGAGGAAGAGAACTGGAGACTCACTTGAGGCCCCTCACGTGTCTTCCTCTCTCTGAAATGGAGATACACCACAAACCAGCCTGTTTATTTCAGTTATAAAGCAACCCTAACATTTCCATTACCATATGTCATCCACCATCTCCCAGATCAACTTAATTCACCAATTTGCCTCTTCCTTTCGTTAATAATTAATGATCATTGAGATCATTTTGCTTGGGGGAAGTTAACTACTCTCTAGCTGCAGGGAAATTTATCACCTACTTGTTATTCTGCCTTGTTCAAAATTCAACTTTGAGAAAAGACAGCTCTCTCATGAAGCTATCTTAAGCAGGTTTTACATTTATTTAGTCAAAGGTCTTCCCAGACATTTTTTTTTTTTTTTTTAAGAACTCCAAGTCTGCATGTACCCGACCTAGATTTAACTCTTACTCCCCACAGCTTCAGGTATTTTTCCTTAGTATATCAATTTGACATGCTGAATGGAAGAATACTAAGAAAAAACTGTTCAGTATTTTATTTTATGATGAGTTGGTAGCAGATTCCATTTCAAGACCTTCTAGAGAGAGGAGTGTAGATGGACAATCCTAAATTGTAAGATGTTAACAAAAAACAGATGGAGTAAGAATACCCCTGAAGACACAAATAGAGAAGTTAGGGTTTGAGGAATTTCACAGAGTAACTTAGCTAAAACTTGATATCAGAAGCAGCCTTTAACAGAAGCCTCTTGGCAGTTGTATGGTACTAACCAGAGTACTGAAGTGCACGCTGAAACCAAGTTGCAGTGGGAAATCAAAGGTGAGGTAACAGATTCAAAACCAGTAAAACAACAGGTTGCAGAGTTTTGAAATCTCTTCTAACAAAGTAGCTGCACGGTAGCAAGGACGAGCCGTCCTCAAAGCCCTTTCTTTTCAGTGTTCTCCTTCACCTTGGCACACAAGTATGTTCAACAGGCCATACATTAGAATATATATACAAAAAAAAAAAATTCAAAGCTGCTTAAAGGGAACTTACAAACTGAGACTCTTCTCTATGTTAATAGTGGCTAGAAGCTTAGTTATATGCACAAAAGCTAGAAGCCACTTGTTTCTACACAGATTGTAGGAGCAAGGTGAGATTGGCAGGTTTGGGGACAGGGCCCCCAGTTCTGAGGAAAGGCGTATCCATGGTATTGGGTGTGCTATTGCTGGTGGGGAGACCACATTTGGGGAAATGATGGGCTTTGGTTTGTAATTTCCCTTTAAACAAGAAGAGATGGCTCACATTTTCCATGTATATCTCAATGAATGTACTGTATTACCATTTTAAAAATTTGATGAAATAATAATTGATTGGTCTCCTTTTGTTTTCTGGTCCTTGTTTAATTTGTTTAAGGGTTTTTGTATACAAAAGTTTACATTTTTATGTATATTTTTCTTGTGTAAAAACTGATGTAATATGTGTATAAAACACTGTATGTATTATCTGTATATAGTGTGACAAAATGATTTTTCTTTCTTTCTTTTGGATGTATTAATAAATCTTGCTGTGAAGTAGCCT EMBV3_15190 TCCAGTGATAATCCCTTAGTAATTAAAAAGTTCTGGAAAAGCTGTGTAACATTTTACGCA Variant GeneID:616552|MGC133736:NM_001080323:20_cdna 733^877 2 EMBV3_02310 GeneID:616552 6 GENE MGC133736 NULL hypothetical LOC616552 EMBV3_23829 ATCGTATTTTTTTTACAAGTATCTTCAAACTGAATCCTTTATGCACCAAAGTTGGTTTTG Gene GeneID:537791|AEBP2:NM_001083485:44_cdna Constitutive 2 NULL GeneID:537791 5 GENE AEBP2 MGC142819 AE binding protein 2 EMBV3_39561 ACCTCAAGAGGAGCAACAGGAGAGAAGAGCTTAAGACTGCCATGCCCAATTTCCAAAGGG Gene GeneID:281607|AGTR1:NM_174233:8_cdna UTR3_Alt 1 NULL GeneID:281607 1 GENE AGTR1 NULL angiotensin II receptor, type 1 EMBV3_34328 CACGCTGTACATACCCCTTCTCTAGACATGACCCACGTATCATCCTGATGCTTCTACACC Gene GeneID:281905|LTBP2:NM_174385:26_cdna Constitutive 0 NULL GeneID:281905 10 GENE LTBP2 LTBP3 latent transforming growth factor beta binding protein 2 EMBV3_30363 ATAACAATAATGTATCCTGCCTGAGGACAGTCTCTGGGTTAAACCTTCTGGCTAATTCTG Gene BVT0102_194255 + 1 EMBV3_37863 GK000018.2:45030914-45036919 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071095 TCONS_00107436 TCONS_00166913 TCONS_00231952 TCONS_00056184 TCONS_00010280 TCONS_00031972 TCONS_00238985 TCONS_00165977 TCONS_00071091 TCONS_00251850 TCONS_00124524 TCONS_00216950 TCONS_00233473 TCONS_00002600 TCONS_00110425 TCONS_00202114 TCONS_00001867 TCONS_00001866 TCONS_00242064 TCONS_00110426 TCONS_00090382 TCONS_00007850 TCONS_00001865 TCONS_00251851 TCONS_00103962 24 XLOC_042868 XLOC_063346 XLOC_101749 XLOC_141440 XLOC_033987 XLOC_005831 XLOC_018217 XLOC_145651 XLOC_100817 XLOC_042864 XLOC_154791 XLOC_076070 XLOC_131385 XLOC_142955 XLOC_000643 XLOC_066329 XLOC_123759 XLOC_000454 XLOC_148728 XLOC_066330 XLOC_055163 XLOC_003410 XLOC_154792 XLOC_062257 Coding TCONS_00107436 XLOC_063346 NonCoding NonCoding - 2:8646385-8656445 - TSS79057 10060 6 TCONS_00107436_11 100 0.793737574552684 1 0 5.33560959916005e-06 6.57215664215544e-06 4.66357045037309e-06 1.80420210843235e-06 5.34632908466218e-06 2.36246741608071e-06 2.65427024416477e-06 3.09673087996972e-06 2.38822090811508e-05 0.0112190749007679 0.00639023059208551 0.00429435393033057 0.000509299160841743 0.0024628645048873 0.000400673656870094 0.00854445062604848 0.0059951691167516 0.00651649035058659 8.70186536865918e-06 2.59740760366197e-06 3.52317553205181e-06 0.00649952531222655 0.0116850827080917 0.00813314475100977 8.18566248504231e-06 7.08187601783374e-06 4.75252536118734e-06 0.00889217969600218 0.00591117696921905 0.0148473456585079 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1265 92.09 0.0870775347912525 1 noncoding 1 1 1 1 1.12603706502141 0.0390027822447545 0.00899590186576138 0.845664037517258 TTCATTTTGATACTTGGCAAAACTAATACAATATTGTAAAGTTTAAAAATAAAATAAAATTTTAAAAAGTTAATAAATAAAATAATGTATCACACAAAATTGTGTAAGTCTATTATAATTTATATAATATCAAGTTGGTTTTATCAACCAACTTTGTAATTTTTTCAGTTATCTTTATCATTTTTATTATCTTCCTGCTAGTCTTTTTTAGTTTGTTTTTAAATTTGGTTATTAATTTCAAACTTCTTGAATTTAAGAACATATATTGTTCTCTAAGAACTGCATTGTACCACTGTATACATTTTGTTATTCAATATAATGCAACTCAATCTTAAATAATTATTTTTATTTTTCCCCTTTAACTGAGAATGTATGTAGAAATATATTCTTTAATTTCCAATAAAAAATAAACTCTGTATAATTAGTTCACTTCTTTTTATTATCTTTGTCAGCAAATAAGTATTAAATATCACTTTTAATTTACTGAGGTTCATTTTGCTAAATTCTACATGTTAAATAGTATAAAATATTTCAAATATACTTGAAAATAATATTTATATCATGTATTCTGATTCCTAGATTCATAATTCTATATGTTAGACATTTCTTTGTACCTCTATACACCTTCTTAAAAGCACTAAAGAAGTTTTTAAATTATGATATTCAATTATCTGTGTTTCTCCACTAATCTTTATATAACTAAAGTTAGATTCAGGGCAGATATTATAAGTACCTATATATTCTCATTATGTAGGATTTATTATTAGTAATCCATTCTTAACTACATGGTAAAATGCAAATAAAAAGAATTTAAGTAGTTTCTGGACTTTAATCTTAAATAACAAGTAATTAACATTTTTATCAAGTACTGATGATTAAAGATAAAATTACACAGTAACCCTCCATATTTTAAACATGTAATTTAATTGTATTAAGGAAAAGAACTACAGATGATGGAAGATGTAAATTGATTTTATTTTTGCACATCTGTTCACATTTCTTTTCAAGTTTAGTCCAGGACAGTCTGTGTATGAATGGCACTGATTAATTCACATGTCCCTGTAAGTAGAAAGATGGATATTAAGGAAGAAAATAAATAATTCTCTGAGTGCTACCATATTCAGATGAAATAATTAAACAATTTCAAAATGCTTCACTTCTCAGTCCTTGTTCCTCAAACATGGGACCCTGACACTGTCAAAAACAGTCCTAAATAGAGGAGACAAATAGAGGAGACAAATTTGAGTCATCCCTCAAATTGTATTTCTCACATCACTACTGAGTTATTGGGCTTTAGTTTATAAGTCAGTTTCTTTAATGTTCAGCTCGTGTGAAACATTTAATCATCGCTTAATAAATTGACAAAAATTTTAAGAAACAGACTTCACAGATGTGTCAATCACTTGGTCACTCTTGGGCTCCCTCTAATCCCACTGCAACTGCATATTTACTCATATTTAGAAGCACAATTCCAATTTATGGAACCCACCCTACAGAAAAAAATTATAGATCTGTTGAAGGCCAAAGAAATATTGGCAGTAACTGATGTCCATAAGCCACTTACTGTCAGTAATGTGTGATGTATACAGGAAATGCATTCCATTCGTGATTAGTTCTGTTAATTGGGGTCAAAACTAGCATAATCTGTTTGAATCTAAAAATAAATTCTTAATATATCATTATGCAAATAAGTCAACACTCTTTTCCAATCTAACCTCTTAATGAAGACTCTAGGAAATTTTACATTTCTTATATGTGACAATTTGAAATGCACTTCATGTTTCTGCCCCTGTCAAACTTTCAGTGGAAGCCTAAAATCAGTTATATGACCATGAGTAATCAGGTGGCCAGAAAAAAAAGTCTTTATACTTCCTGCTTTATTGACTGTGCAAAAGCCTTTGACTGTGTGGATCACAACAAACTGTGGAAAATTCTTAAAGAGATGGGAATGCCAGACCACCTGACTTGCCTCCTGAGAAATCTATATGCAGGTCAAGAAGCAACAGTTAGAACTGGCCACAGAATAACATACTGGTTCCAAATCAGGAAAGGAGTACATCAAGGCTGAATACTGTCATGCTGCTTGTTTAACTTATATGCACAGTACACCATGGGAAATATCAGGCTGGATGAAGCACAGGTGGAATCAAGACTGCTGGGAGAAATATCAATAACCTCAGATACGCAGATGACACCACCTTTATGGTAGAAAATGAAAAAGAACTAAAAGCCTCTTGATGAAGGTGAAACAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACTAAGATCATGGCATCCAGTCTCATCACTTCATGGGAAATAGATGGGGAAACAATGGAAATGGTGACAGACTTTACTTTCTTGGGCTTCAAAAACACTGCAGATGGTGACTGCAGCCTATGACCAATCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCAACCAAGGTCTGTCTAGTCAAAGCTATGATTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACCATAAAGAAAGCTGAGCACTGAAGAATTGATGCATTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATGGAAGGACTGACGCTAAAGCTGAAACTCCAATATTTTGGCCACTTGATTCCAAGAACTAACTCATTTGAAAAGACCCTGATGCTGGGAAATATTGAAGGCAGAAGAAGGAGACAACAGAGGATGAGATGTTTGGATGGCATCACTGACTCGATGGACATGAGTTTGAGCAAGCTTTGGGAGTTGGTGATGGACAAGAAAGCCTGGCGTGCTGCAGTACCTGGGGTTGCAAAGAGATGGACAAGGCTGAGCGACTGAACTGAACTGAACTAATATCTCATGGAGTTGAACAAAGAATAAATAAGAGGCACTTCTTGTATGTGAATTTTGTAAGCAGACGTAATGCAACTAAACTGTTCCATCCAGTATCTCACTGTTTCTCACAGAGGGCACTGTGTGACAGTAGGTTGAACAAGGAGCCTCTCTGATGTTTTTCTGAACCTTATAAGTATTCCATCTGGAGGGTGGAAATGACAGCAGCTAAGGGGAATCTCTCCTTGCTATTCTTTGGAGTTCTGCATTCAAATGGGTATATCTTTCCTTTTCTCCTTTGCTTTTCACTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTCCTCAGACAGCCATTTTGCTTTTTAGCATTTCTTTTCCTTGCGGATGGTCTTGATTCCTGTCTCTTGTACAATGTCATGAACCTCAGTCCATAGTTCATCAGGCAATCTATCAGATCTAGGTCCTTAAATCTATTTCCCACTTCCACTGTATAATCATTAGGGATTTGATTTAGATCATAGATGAATGGCCTAGTGGTTTTCCCTACTTTCTTCAATTTAAGTCTGAATATGGGAATAAGGTGTTCATGATCTGAGCCACAGTGAGCTCCCAGTCTTGTTTTTGCTGACTGTATAGAGCTTCTCCATCTTTGGCTGCAAAGAATATAATCAATCTGATTTCGGTGTGGACCATCTAGTGATGTCCATGTGTAGAGTCTTCTCTTGTGTTGTTGAAAGAGGGTGTTTGGTATTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTTTTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAAGTTATATACTCTCCAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTCCCATAATTAACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAAACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGTTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGAGACTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAAAACAAAACAATCAGAATTAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTACAAAGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGACGAAGAGGGGAGCTCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAAGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCAAACTGCAGACTCAGGATTTTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGAGCCACAAGCTCTGCTAACAGAGCACTGGTTCCCTAGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCTGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCTGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCCTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGTTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCTGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTTAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTTGATGCCTTGTAACCACAATCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAGATCTCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGAGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGAAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTATAAAGGAACTACAGCCTCATTTATTATTCGTAATTCCTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATATGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTCCATCAGCCCATACTCTAGTATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTCATGAAAACAGAGGCATGGACCTTGTTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACGATCAGAAACTCGTGTTAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGGCAGTCTCTCTTCCAGTGCGGTCCTTTGCAGACCAGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTATGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCTGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTTGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCATTCATCTCCATAAGCAACCGCTTTCCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCTTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTAATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTATTTCTCCTGGTGGGTGTTTCATAAAGAGACAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTATTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGATTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTTGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTTCCTTGTTCCTGACAGAACCGGTCTAATTGTAGAACAGGATTATACTTAAGAGACCCTCCAACTGGCCAGCGTTCGCCATCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTTTTTAGGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGAAATTGTTAGCTCCCATCTGTAAGAGAGAAAAAAAGTGACCAAGGCCATTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACTGACGCAGGGGCCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTGGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACTACCGGGGGAAACATTCGTCACCTGAGTGCCTGTGCACGGCCCTGAGTATTTCCTGACTACAATAAGACAAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAACCCATCGCAGCCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCAATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGACAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATAAGCTGTATGAGATCACCGTGGAACCGCAGAGCAGGGCCCCTTACTTGCTTCACGCAGGGCATGCCATTCATTCACACAAGCACACGGTAGAGTTAGTAAAGCACGGCAGAAAACGTGTTCGCTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGGATCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAAGTTATATACTCTCCAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTCCCATAATTAACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAAACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCAGTATGACCAGTGTGTTCTCTTGGCAAAACTGTTAGCC TCONS_00101618 TCONS_00101619 . 5' 129907 TCONS_00101618 TCONS_00101619 . 5' 129907 EMBV3_42051 TGGAGTGATGCCTTGAAACCAGTTGACAGAATGGTTCATGTGAAGCCACTGAAGGAATGG Gene BVV0102_210713 + 0 NULL GK000021.2:43630708-43872330 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25662 ACGGCCTCAGCGTCAAGTTCTTCGGCCTGGACTCTAACCAGAACAAGATCCTGCCAGAGA Gene GeneID:540868|LOC540868:XM_002691210:34_cdna Constitutive 0 NULL GeneID:540868 11 GENE LOC540868 NULL similar to Cytochrome P450 26B1 (P450 26A2) (P450 retinoic acid-inactivating 2) (P450RAI-2) (Retinoic acid-metabolizing cytochrome) EMBV3_41331 TCTAAAACCGCTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGAC Gene GeneID:517422|REV3L:XM_002690110:112_cdna UTR3_Alt 2 NULL GeneID:517422 9 GENE REV3L NULL REV3-like, catalytic subunit of DNA polymerase zeta (yeast) EMBV3_35987 AGGACTGCCAGGACTAACAGAAGAACCGTGGAAAGCTGAACTCTCCTGGTAAGGTGCGCA Gene BVT0102_095317 - 1 EMBV3_12087 GK000007.2:83658728-83706300 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214396 1 XLOC_130677 Coding TCONS_00214396 XLOC_130677 NonCoding Coding - 7:83671577-83698042 - TSS160375 650 2 TCONS_00214396_1 80 2 0.975513905683192 0.00124621645355341 8.63424545412003e-05 8.4350434116586e-05 0.000143368825352916 0.000266963615601003 1.31093386255898e-05 0.000377384083499785 9.30630808526584e-05 7.17642026898898e-05 0 0 3.73881529205017e-134 6.41573180689752e-05 5.97674370411902e-128 2.44282554769415e-145 0 0 0 0 0 0 0 0 0 0.000559207526123385 7.81968659073959e-05 7.36564138858664e-97 0 4.153922260584e-22 0 XR_235368.1 LOC101907457 PREDICTED: Bos taurus uncharacterized LOC101907457 (LOC101907457), 0.0 719 100.00 0.610769230769231 0 noncoding TCTTTTTCCATGCTCTCATTTGGGTGCTCTCGGTTTGCAAACCATTGTTCAGAATGTGGGCAATAATTTTTATTAGTTGCTGACTATTGGTTTTATTATGATATGGCCACTTCTGAACCAAGGATATTTAATCGTGCCTGAAGTGGGGCTCAGAGAAGACAAACCCTGCAACCTCAAGCCAGTGGGCAACCTGGCTGCTGCCTCCCGTGAGCCCTTTCTGCCTCTGTCTTCCCGCCAAGCGCAGAGTCCCTGGAACCGGCAGTGGATGTGCGCACCTTACCAGGAGAGTTCAGCTTTCCACGGCTCTTCTGTTAGTCCTGGCAGTCCTCCAGCTGGCTGAGGGGACCTGTCTCCTCCAAGTAGGACCCCAGCACCAAAGGGCCCGATCTGTGGCTCCAACCATTCACTCCCCAGAGTAGGTTCCCCACTTCCCCACATATTCCCTTTTCCTCTGAGTCCCCGCGCAGTGGCACAGGTTCCAATGCTATTGCTTTCCTTCTCTTCCTACCTGATTACCTGTGTATCTTTCTTAGAGCTTTGGTGTACAGGAGTCCTTCCGCCAGTTTGCAGTGAAAACTGTCCCACATGTAGATTATCTTTGATGTGTTCATCAGGGGAGGTGTGCTTCACATCCTTATACTCTGCCATCT TCONS_00217831 TCONS_00217832 TCONS_00217833 TCONS_00217834 TCONS_00217835 TCONS_00217836 TCONS_00217837 r 3' 8259 TCONS_00217830 r 5' 12851 EMBV3_34168 GACCACGCTGGACGCCATGATCATGGACGGCACTACCATGAACGTGGGAGCAGTCGGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31938 TCAGAGGAATGGTCAACTCAGGATGTGCTTTTGCTTCATTTTGGCGGAGTCGGGGGTGGT Gene GeneID:504741|COLEC12:NM_001101843:38_cdna UTR3_Alt 2 NULL GeneID:504741 24 GENE COLEC12 MGC155255 collectin sub-family member 12 EMBV3_35982 CCTACGAGTGCAGCCACTGCCACAAGACGTTCAGCTCTCGAAAAAACTACACCAAGCACA Gene GeneID:506887|ZBTB45:XM_002695514:331_cdna Constitutive 0 NULL GeneID:506887 18 GENE ZBTB45 NULL zinc finger and BTB domain containing 45 EMBV3_04951 TCTGAAGACACAGAGATGTGATGAGAACAAGCACTGGCTTTGGCTGACCGCTGTTTCTGG Gene GeneID:534439|PDZK1:NM_001034611:77_cdna Constitutive 0 NULL GeneID:534439 3 GENE PDZK1 MGC127218 PDZ domain containing 1 EMBV3_39044 TCTCTCCACTGTCTTTCTCTATGCAGGGAGCTTGGTGCTATGAGCCTGGTTGGACACAGA Gene BVV0102_010323 + 0 NULL GK000003.2:12267069-12307361 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43143 ACAGCAATACACCCAGGTACATGTCAGTGGACGGAGCAGATGACTCAGATGAAAGCGATG Gene BVT0101_012388 + 0 NULL GK000018.2:60519395-60544989 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087401 1 XLOC_052461 NonCoding TCONS_00087401 XLOC_052461 NonCoding NonCoding - 18:60531480-60534169 - TSS64897 635 3 TCONS_00087401_3 50 2 0.764508928571429 8.31543415690931e-05 0 1.45732252361889e-05 0 5.31297262190892e-05 6.19647555328161e-06 9.18379588962713e-06 1.86289635909697e-05 6.005608135328e-05 0.000297409923005057 1.26175457843597e-05 2.53395173209046e-05 1.12963703817446e-05 2.469288673601e-06 0 0.00185782289496672 0.00052726349383685 0.00105368548967938 4.98764624472035e-05 0.000175350068338272 1.43420501019503e-05 0.000128547108140862 0.00114374689657117 0.000334413465440012 1.4547991134601e-05 4.25316456837828e-05 9.22701313428434e-06 4.53787914836858e-05 0.000375153286453084 0.000449734950930609 XR_238509.1 LOC101907337 PREDICTED: Bos taurus uncharacterized LOC101907337 (LOC101907337), 0.0 1146 100.00 0.998425196850394 NM_032584.2 ZNF347 Homo sapiens zinc finger protein 347 (ZNF347), transcript variant 7e-26 122 83.74 0.188976377952756 0 noncoding 0 0 0 0 -0.0115071798368774 0.916628683356508 0.00801943200343032 0.884432813660744 GCTGACATTCTGGGATGTGGCCATAGATTTTGCTCAAGAGGAGTGGGAATGCTGGACCTCGGTCAGCAGGAATTGTACAGGGACGTGATGGTAGAGAAATATAGGAACCTATCCTCCTTGGGATGAAGTGAAGGATGCCTGGACTGTAAATCAAATGGAGAAAACAGCAATACACCCAGGTACATGTCAGTGGACGGAGCAGATGACTCAGATGAAAGCGATGGAGGATGCAATACTTTGTCATGTGGTTTGGGAAGATCTACTTCAACGGAAATGATTTTGGATTAGCCTTGGTTTATTTCTGTCCCTGTCATAGAGGGTCATCTCTTGACCCCTTCTTGATTCTTTTTATCATTTATGTATTTCTCTGCAGTGATTAATTTTCACATTCACAGTGAGGACAAGAATTCTTGTCTTGGCCTGGGACAAATGGCATGACCTGATGGCTTCTCCACTGAGCCACTGAGGAGGTTTCAGGGAAAACTGTGAGGATTTCTGAGTAACTATATTAAGCCCTTTTAAATCTTAATGTGTGGGTGGAGTCGTGAACAAACTGCCAAACTTATGGGAATACTGAGGACAGATATTATTTGTTTCTACCCTATAATTTCCAATCCTTGGAAACTACATGTATG TCONS_00087403 s 3' 12996 TCONS_00087403 s 3' 10821 EMBV3_17279 TGAACAAATTCGAGCTGATAGAAACCCCAGTGCTACGGTGTTGTGTAACGGACCAGGAAC Gene GeneID:506537|ALG14:NM_001077863:123_cdna Constitutive 0 NULL GeneID:506537 3 GENE ALG14 NULL asparagine-linked glycosylation 14 homolog EMBV3_00443 GTAACGTGTAGGTTCCGTATTTAATGCCTCGATTGCCTTTGAAGCGTGGTTCCCTCGTGG Gene GeneID:513870|HPCAL1:NM_001098964:120_cdna Constitutive 0 NULL GeneID:513870 11 GENE HPCAL1 NULL hippocalcin-like 1 EMBV3_38068 CCCAGGACTCCGCCTGTCCAGTTGCCACTTGCCCAAAGGCTTCATTTTACAGATGAGAAA Gene BVT0102_079786 + 0 NULL GK000021.2:66760018-66764060 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120030 TCONS_00120031 TCONS_00120034 TCONS_00120035 TCONS_00120033 1 XLOC_073037 NonCoding TCONS_00120030 XLOC_073037 NonCoding NonCoding - 21:66760441-66763038 - TSS89731 1570 3 TCONS_00120030_2 79 0.585987261146497 3 0.396379044684129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00097544470302968 4.824731550092e-15 2.39110360825227e-11 0 0 0 1.45767188513861e-08 7.22395797084753e-10 0.000374415594051898 0 0 0 8.48233562279373e-05 2.76523037770543e-16 0 XM_005196331.1 LOC101906901 PREDICTED: Bos taurus uncharacterized LOC101906901 (LOC101906901), 0.0 1005 99.82 0.356050955414013 0 noncoding 0 0 0 0 -1.1280638599222 0.10799356986988 -0.0265622311918805 0.606395238918003 GACGGCTGCGTTGTGCAAGTGAAAAGAAGGGGAGGCTTCCCTGGCGGTCCAGGGGTTGACTCCGCGGTTCCACTGCAGAAGACGTGGAGGCAAGCCCGCAAGCCCGCATGCCCCGCCTTGCAGCCAAAGCAAACAAACACAGAAGGAGCTCTGGAAAGGGATCCCCCCGTCCTCCTCTTGCTCCTTTGGGACTTTGCGTGGTGTGCCCTGTGTACTGGAGCCCGACTTGCAGGAGCTGCCTGGGGAAGCAGACTGACCTGGAAGTCAGAGGCACCACCAAGCAGGAGGAAACGATGGCGAGCATCGCCCCGGTCTCCTAATAAGCAGGAAAGCTGGGACACGCCCCTGATCTTCGACTTTAAAAGCCCAAAGTCGGAATGTCAGCCCCATGTTACAACCAGTGAGATCTGGGTCCCAGCTCTGCCCTCTGGGCACCACCATGCCTGCCAGCTCCCTCTGCCCAGGACAGAGATCAGAAAACCACTCACAGATGGACCCCAGGACTCCGCCTGTCCAGTTGCCACTTGCCCAAAGGCTTCATTTTACAGATGAGAAAATTGAGGCCGAAAAGGGGACAAGTCAAAGGACAGACTGGAGAGAGACCTGGCAGCGTAATAAAAGTTCATGACTTTCAGTCTTGTTCTTGTTCAGTTGCTAAGTCATGTCCAGCTCTGTGATCCCATGGGCTGCAGCACGCCAGGGTTGCCTGTCCTTCACCATCTTGTTCAAACTCATGTCTGTTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCTCCTGGCTTCAGTCTTTCCCAGCGTCAGGGTCTTTTCAAATGAGTCAGCTCTCTGCATCAGGTGGTCAAAGGATTAGAGCTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGGTTGATTTCCATTAGGATTGACTGGTTTGATCTCCTTGCTGTTCAAGAGACTCTCTAGAGTCTTCTCCAACACCACAAAAGCATCAGTTCTTCATCACTCAGCCTTATTTATGGTCCAACTCTTACATCCCTACATGACTACTGGAAAAACCATAGCTTTGACTATATGGATCTTTGTTGGCAAAGGGATGTCTCTGCTTTTTAATACGCTGTCTAGGTGTGTATAGCTTTTTTGCCAAGGAGCAAGCATCTTTTAATTTCGTGGCTGGCTGCAGTCACAGTCTGCAGTGATTTTGGAGCCCAAAAATATAAAATCTACCACTCTTTCTACTTTTTCCCCATCTCTTTGTGATGAAATGATGGGACCGAATGACATGACCTTTATTTTTTGAATGTTGAATTTTAAACAAGGTTTTTCCATTCCTGAGTAATCTCCAGTTCCCCGAGGTCAGCTTGGACCACAGAGACTCAGCTTCAAGACGGTGAATGCACTCAGAACACGTACCCTAGCCTGCTCACCACATCTCAGTTCCTGGAAATGAAAGAAACTGCATATCTGCTTGCAATGTGGTGTCCTACGTGGGATCCTGATGGGAATTAGGTAAAAACTAAAGGAATCTGAATAAAGTATGGACTTCAGTTGATGACAATGTACTAACAT TCONS_00121869 r 5' 393 TCONS_00121869 r 5' 393 EMBV3_16368 GCCAGAAGTTACTTGGGCTCAAAGTTAAAGGAAGATGTCTTAGGTCCACCTCCTGACAAT Variant GeneID:508163|UBLCP1:NM_001045994:16_cdna 243^334 1 EMBV3_10070 GeneID:508163 7 GENE UBLCP1 MGC128319 ubiquitin-like domain containing CTD phosphatase 1 EMBV3_27085 TAATATAACTTTGCAACCTCCATTCCCTACTGCTCACCCACCCCCGAAAACAGACGCCAC Gene GeneID:784388|RPL7:XM_002707737:47_cdna Constitutive 0 NULL GeneID:784388 16 GENE RPL7 NULL ribosomal protein L7 EMBV3_13571 GAACTGGAAACCAAAGCGGTGTTAATGGTAGATGATGACTTGCTGATTAGCGCCCAGGAC Gene GeneID:540527|EXTL2:NM_001076224:173_cdna UTR3_Alt 2 NULL GeneID:540527 3 GENE EXTL2 NULL exostoses (multiple)-like 2 EMBV3_29891 TGTGCAGGTTGGGTTAGATAGTGAACATCGTTCTTCCGCGCGTGTCGGAGATTTCCTGGT Gene BVT0102_420560 + 0 NULL GK000022.2:44121847-44150603 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126874 1 XLOC_077521 Coding TCONS_00126874 XLOC_077521 Coding Coding ARF4 22:44149069-44171881 = TSS95037 5003 2 TCONS_00126874_6 180 0.0905456725964421 6 0.780939020647933 0.000504318467676985 0.00020853685076113 0.000321951351019985 0.000611714539194861 8.1500439208724e-05 8.05079139386882e-05 0.000144932653317588 9.21121194750913e-05 7.57459870935023e-05 0.000107021021809666 5.73898887789111e-06 0.000140585493444546 0.00013018950952568 0.000118700390556349 1.25665152932335e-232 0.000225802206866947 5.77710304075771e-05 0.000106721519569448 0.000194091758322752 0.000570714707884931 7.57531842757534e-05 8.66256275900505e-05 0.000262507003034521 0.000318886481664322 0.000585910588475798 0.000363452890995089 8.97973949401833e-05 1.14475755191914e-05 8.81930140058044e-06 1.33664011653241e-167 NM_001034530.2 ARF4 Bos taurus ADP-ribosylation factor 4 (ARF4), mRNA. 0.0 1581 100.00 0.174895062962223 NM_001660.3 ARF4 Homo sapiens ADP-ribosylation factor 4 (ARF4), mRNA. 0.0 2163 87.62 0.348790725564661 TCONS_00126874_6 sp|Q3SZF2|ARF4_BOVIN ARF4_BOVIN ADP-ribosylation factor 4; 1e-131 371 100.00 0.994444444444444 6 coding 0 0 0 0 0.120380005839666 0.566024187184188 0.00244566321081079 0.969606485761658 ACTTTACTGTGGGGCTTCCTAGGTAGTGCTAGTGGTAAAGGATCCACCTGCCAATGCAGGAGATGCAAGAGACTCTGGTTTCATCCCTGGGTGGAGAAGATCCCCTGGAGTGGGGAATGGCAACACACTCCCCGTATCCTTGCCTGGAAAATTCCACGGACGGAGGAAACTAGCAGGTCACAGTGCATAGGACCTCAGAGAGTCACACATTGACTGAGCAACAGAGCAGATATCACTTTACTGTACTTAGTAATTATTTGGCATTTCACAGTAACTGTACTTTGGAGATCTTTTCATTAGAATTTATAGTTGTACATCATTCTAAATCCGGAGAGTATTCTCATAAATAGTATGGATATACCATAATTTATTCAGTTGTCCCTCAGTCATTCAACTCTATTTGAGTGATTACAAAGTAATATAAAAACAGACTAGGGTCCAGTTCTCTAGAGTTTTTACACAAGTGGGAGAAGGGAAGAGGGTTACCAATAGTAATATCAAAAGTGAAATCATAACTTGAAGAGCAGATGGTTTGAGTTATTTATCTAGTCAGGAGGTCAAGAATGTATTTTCCAAGGGGGTTAAACAGATCTGAAAGGTGGGTGAGCATGTCTTAGTCAGCATAAGCGTCGAGGTGGGGAGTGGGGTGCGGCTAATCCTAAATTGCACCAATGGTATGGCGGAAATACATGCGAGGTGGAGAAGATTGTGGGGAACTTTACATTTTTAACAAGATATATACTTTATTTTGTAGACAAGAAAACATTAAGATCATAAATATTTTTGAACTGAGGCTTTCCACTTCAACATCGGGAATAAATCTTCCATGCTCCTTTTTGGAGAGAAGAAAAATCAGCCTTCCCCGTTGGCTTCTCTTAAAAACCTGCAATAGAGGATGTAAATGTCTTGGAGCTCTTTGTCTTTACAGACGATTAGGGATCTTTACTATGACCTGGCGTTGGCGCGTTCGAAGTGTTTAGGCCTAGCTTCATAAACAAGGGTTGCTACAGCCTCGTTCTCTCCGCACTGGGTTTTGAACAACTTATCTCCTGAGAAAGCAAGGTTTGTCTTCAAGTCTCCATTAGGGCAAGTGTCTGATTCGCCGGGTGAAACGTGTACCTTCGGAAACCAGGAAATCTCCGACACGCGCGGAAGAACGATGTTCACTATCTAACCCAACCTGCACAGCCCGCCTTTACAGCAGGAAGGAATACAACCTCCAAGATGCATTTTTCTGGGCCGAAACGTCTCTCCTTGAGTCTGATTGGACGTGACAAAGCAAGGCATTGTGGGACTGTGTCCGTCGTCCAGTACACGGAGGCTAACTGGCCTCGCCCGGCTCCAGGAGCCACGTCCGGGGGGCTACGCCGGCCAGAGGCGCACGTCAGCGAAGATGGGCCAATCTCTCTCCTGCGCAGGCGCAGTGGTTCGGGAAGCGCCGGAAGCGCAGGGGGATGGGGCGGCGGTGACGCGAATCTGTCCGCGTTGGAGGGGCCGGGCCGCTGCCGTAGTTGCCGCGGCTGCCTCGTGACGTGGCACAGCCGAAGATTTAACGCCGGAGCCGGAGCTGCCCCGCCAGTCCTGGAGCAGGTCCTCATCCCGCTGTCCGGGAGCTTTTTCGGACACGCCGGCTAGCGAACCGTCCTCGCAGCCGTCTTTCTTCCTCAGCAGCTCTTTCCTCGCTGAGTTTTCTGGGAGCGTAAAAGGAGAAGGCCCGGGGACGCCCCAAACCCCTTTTGCTCCTGCCCATTGCAAGTGCCACTACCGCCATGGGCCTCACCATCTCCTCCCTCTTCTCCCGCCTCTTCGGCAAGAAGCAGATGCGCATTTTGATGGTTGGATTGGACGCTGCTGGCAAGACGACCATTCTGTATAAACTGAAGTTAGGGGAGATAGTCACCACCATTCCTACCATTGGTTTTAATGTGGAAACAGTAGAATATAAGAACATTTGTTTCACAGTATGGGATGTTGGTGGTCAAGATAAAATTAGGCCTCTCTGGAGGCATTACTTTCAAAATACCCAGGGTCTTATTTTTGTGGTAGATAGCAATGATCGTGAAAGAATTCAGGAAGGAGCAGAAGAGCTGCAGAAAATGCTTCAGGAAGATGAGTTGCGAGATGCAGTGTTGCTGCTTTTTGCAAACAAACAGGACTTGCCGAATGCTATGGCCATTAGTGAAATGACAGATAAATTAGGTCTTCAGTCCCTTCGTAACAGAACATGGTATGTTCAAGCCACTTGTGCTACACAAGGAACCGGTCTGTATGAGGGACTTGACTGGCTGTCAAATGAGCTTTCAAAACGTTAAATGAAGCTGGATATCTAACCAAGGACATGTTTGATAGAATTGGTCTAGGCTTGTTACAACAAAATTAGTTTGCATCTTGGTTATTAAACAGTATCTGGGACTGGTTTGGGCAGAATATTACTGCGTTTAAACTTATTTTGTTGCCAATTATTGTTTACCAAGTGTAATGTTGCCATTTAGCAATATGCTTGGTTTTAAAGAGATTCTCCTTAACTTGGGAAAAAAAAAAGTGTCCTCTTTTAATTTTACTTCCCTTAAGCCTAAATGCCTGGACTTAGCTAATGTGACACCTTTTAAATAAATCCATTTTGAATGTTTTTTTTTTTTGAGCCCACAGGAATAATGTTTTAAAGTTACCCCTTGCTACTTTAATGATACCTTTATCATTCCTGGGACAGTCTGCTGATTTAAAAAAATGTAGCATTCCATTTGTATTTATTTTCCCCCCTTGCCAAAAAGATTTTTTAATACTGCTTGTACCAGCCAGGGAAATGCTCCGAAACACTATTCAGATCTTGCACTGAGGAACTTCTATTTTTACCCCATTGTTATTGACTCCTGGCTTCCATCAGCCAAGCTTACCTTGGTGTGGTTTAGATTTGATAATTAATTCTGTGCTAGATAAAAAGAGTGCATATGGAGATGATTTTTAATCCTCAGCAGATTGTCTTCCTTTATATTGTATCTTTTTTATGTTGCATGTTGCTTTTGGTATCAGCCTGACTCTTTGCCCAGTATATGATAGTTCTGCTGTTTTATTGTTTATTGGTGAACATATCTTCATTAAGAGTTTTTGGAAAACTCATCAAACTCAATGAATAAGTTTTCTTCATAACCCATTTGGAATTATTCCTAATAAAATGATAAAAACATTTAATGGTGTTTGTTTTTCCTGAGTCTTGAAGATGTTTGAAATGGATTTTTCTTATTTAGCAGAGTTGATTTGCATTTATTACATACTGTGAACAGTCATACAGATCCCACTGAGTTTATTGTTTGAATTGGAAGTAAAATACGGGTTGCTAAACATGTGTATAACAGAGTGGGGAGCAGCTTCAAAAATGTAGTGTTCTTTGATAAAATGCCATTTTGATGCTGTACATTTCTAAAGTCAGATCAAGAGTAAAAAGCTGTAATAAAATGAACTACCCCCAAAGTATATATGCACGTATTTGTTTCACAGCTCACATTAGTTAAAAAACATCCAAGTGTTGTTTGCATGGCGTGATACATAGGTTGTTAGTGATGCTGCTCCCCTATGTAGGAGAACAAAGTTCACAAGCACTTTTCTTTTTTAGTTGTCACAAATTTCAGAACTTCTGCAGAAAGTGACTAATTCTTTGCCATAAGGTATGTACCTCATGAACTTAATCTGTGAAGTTACTAAGAACTCAACTTGGTAACCCAATGAGTAACTTGGTTTTTGACTATATATATTTTATAGACCTTGCATTTATGATTATTAATGGCTTAGATAAATATATGTATTGGAATCTTACTTTTAAAACCAAATACATGCTTGTAAAATAATGTGTATTTTTGAATTGTAAAAAAAAAAAAAACCTGGACAAAGTGAAAGAAAATTTAAAAAGTTGTCCAACGGGTTGCCGGGAGAAAAATGTATGCTAAACTTGGGTTATTTAAGTTTAACTTCTCTAACTTATTCCCTCTGAATAAGAAAGGTCTTATTTCTTGAATAAAACTTGGATAGGGTAAATAGTGTGAGTGGTTTTATGGGCCTCGACTAGGAGATGCAAAACTATGGTAGGTTTAGTGATGGGATCATAGTTAAATTAACACTGTTGTATTAATTAAAAAAAACTAAACCAAGTTAAGTCAAGGGTGCTTTCATGAACTCTGAAGACAGAATAAAGAGAATCCATAAAATCTTACTTTCAGCATATGGCAGCTCTTACTACACCATTGTTGGAAATGACTGCACTAGGAATGTAAAATTGCCTAGTTTTCACTAAATGGGCTTTATAAAGATTTGCATGATGGCTTATTCTTATTTATTTTACTTTTTGACTGTGCTACTTAGCATGTGGGGTCATAGCTCCCTGAACAGGGCCAGTCTGAACCTGCACCCCCTGTGTTGGAAGTGTGGCGCCTTAACCACTGGACCATCAGGGAAGTCCCCTTTTTTTTTTCAAAGAAAACATTAAGTTGCCAACTTGGCGTATTTTTACCTCAAGAAGTACTGTTTTTCTTCAGTCTTGGTGGTAGTTTCTTGGTTTTGTTTTTAAATTAAATTGAGAAGTTTTTTTTTTTCCCCCCACGTAGAAGTGAGTAAATAATTGGGAAGAAGTGTAAATTGAAAGAATCCCTAAAATGCCTTTCACTGTGCTAACATTTTTTGAAAACAATGCAGACTTACAAAATCAGACTTATAAAATGCAGACTTACTTTTCACTGTCGTGGTTTACTGACATGATCAGTACCTATATTCAGTGCTTACTGTTTATATAGATTTTAAACTTAGTGTTGATCGATCAAAAAGAGGTCTTAGTGTTGATCGATCAAAAAGAGGTCTTTGTGACCCTCATCTTATACAGAACAGTTGATATATCCATAGACTATAGAGTATTCTGTCTAGTAATTGTTAAGTATGTTAACAGAGAAACTGAAGAGGAATTGTGGTTCTTTTAAAAGCTGGCTAGCTGCATTAGTTGAGGATAGAACCATTTTCTG EMBV3_08373 CCTCATTTGTGCTGTTAAAGTGGCAACCTGTCCTCCTGGTTTACCATCCATCAATGCCCC Gene GeneID:786530|LOC786530:XM_002700055:35_cdna Constitutive 0 NULL GeneID:786530 X GENE LOC786530 NULL similar to germ cell-less EMBV3_32100 CGGATCTAGCATGTGAATTCCTCTGTTTACTGAATCCTTCTGGGGCCACTTGTGCATGCC Gene GeneID:100336528|LOC100336528:XM_002685398:35_cdna Constitutive 0 NULL GeneID:100336528 2 GENE LOC100336528 NULL low density lipoprotein receptor related protein-deleted in tumor-like EMBV3_39133 CAGAGCACTCAAATATAGGAAGCAAACACTGACAGAACTGAAGGGAGAGAAAGGCAGCAG Gene BVV0102_112602 + 0 NULL GK000027.2:24323721-24632929 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30464 TAGTGGCGCTGCCTTTGCTTTTTGCCATGGGAGTTGAGTACCCCTTGGTGAACGTGCCCA Gene GeneID:100139476|GPR39:NM_001143744:8_cdna Constitutive 0 NULL GeneID:100139476 2 GENE GPR39 NULL G protein-coupled receptor 39 EMBV3_08804 TGATGGGGCTAAGTAATACCCAAAGCTCACCCTACCAACTATTTCCTCAGTACCTTGCAG Gene BVT0102_146943 + 0 NULL GK000014.2:65617319-65816007 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001347 1 XLOC_000327 Coding TCONS_00001347 XLOC_000327 Coding Coding LOC100140254 1:82540595-82551980 = TSS679 2456 1 TCONS_00001347_2 162 0.187296416938111 2 0.784434293745608 0.00555778508460835 0.00448824059389126 0.00396383791869753 0.00435832110496421 0.00402327747557805 0.00158533931340747 0.00382600952108032 0.00456247225421819 0.00790686206535918 0.00263186471262041 0.000769427904657373 0.000661800685382507 0.00157015003622339 0.00362342867655006 0.00332225212212391 0.0367897885196908 0.0171667315439752 0.0383565734317955 0.0038511651623861 0.00372450640215391 0.00168126868813877 0.0157815111420088 0.0142062013793034 0.0204301911697047 0.0040651246150311 0.00273385714035011 0.00263375784129734 0.00259293064329916 0.00184024529542867 0.00528642386421562 XM_005215615.1 YWHAZ PREDICTED: Bos taurus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ), 0.0 4089 98.93 0.943403908794788 XM_005251060.1 YWHAZ PREDICTED: Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ), 0.0 3303 91.60 0.943403908794788 TCONS_00001347_2 sp|P63103|1433Z_BOVIN 1433Z_BOVIN 14-3-3 protein zeta/delta; 1e-83 251 89.86 0.845679012345679 1 coding 0 0 0 0 -0.0314630382211034 0.823930389401175 0.000339865512311886 0.996082182367029 ATGGGGAAGTGGGAGCTCAGGGCCAGGGATCAGCAGCTGTTCTGCTTGGCTGCTGGCAGGGGTGCAGCCCAGCACACAGACGTCTTTCTTCTTCCTCGGAGAGAGTGGGAGGCCGCTGGTGGCAGCTACCGCTACTTGGCTGAGGTTGCAGCTGGTGATGACAAGAAAGGGATTGTGGATCAGTCACAGCAAGCATACCAAGAAGCTTTTGAAATCAGCAAAAAGGAAATGCAACCAACACATCCTATCAGACTGGGTCTGGCCCTTAACTTCTCTGTGTTCTATTATGAGATTCTGAACTCCCCTGAGAAAGCCTGCTCTCTTGCAAAGACAGCATTTGATGAAGCCATTGCTGAACTTGATACATTAAGTGAAGAGTCATACAAAGACAGCACGCTAATAATGCAGTTACTGAGAGATAACTTGACATTGTGGACATCGGATACCCAAGGAGACGAAGCTGAAGCAGGAGAAGGAGGGGAAAATTAACCTGCCTTCCAACTTTTGTCTGCCTCATTCTAAAATTTACACAGTAGACCATTTGTCATCCATGCTGTCCCACAAATAGTTTTTTGTTTACGATTTATGACAGGTTTATGTTACTTCTATTTGAATTTCTATATTTCCCATGTGGTTTTTATGTTTAATATTAGGGGAGTAGAGCCAGTTAACATTTAGGGAGTTATCTCTTTTCATCTTGAGGTGGCCAATATGGGGATGTGGAATTTTTATACAAGTTATAAATGTTTGGCATAGTACTTTTGGTACATTGTGGCTTCACAAGGGCCAGTGTTAAAACTGCTTCCATGTCTAAGCAAAGAAAACTGCCTGCATATTGGTATGTCCTGGTGGGGAATAAAAGGGATAATTGGTTCCAATCACAGGTGTAGTTGTGGGTACTTTTTAGGTTTGGAGCATTTACAAAGCTGTAGTAGAAATGGATATCCCATGGATATTGCATGTTAAACCATGTGTTATCTGTGGAATACTCAGACTCAGTGTGCACACTGTTGACTGCAGCTATAGAAGTGTTCCTTTAGTTGTGACCCAATTTACTCTGGATAAGGGCAGAAACGGTTCACATTCCATTATTTGTAAAGTTACCTGCTGTTTGCTTTCATTATTTTTGCTACACTCATTTTACTTGTATTTAAATGTTTTAGGCAACCTAAGAACAAATGTACAAGTAAAGATGCAGTAAAAATGAATTGCTTGATATTCATTACTTCATGTATATCAAGCACAGCAGTAAAACAAAAACCCATGTATTTAACTTTTTTTAGTTCTTTTTTTTTTTTGGTTTTGTGATTTTTTTTTTTTTTGATACTTGCCTAACATGCATGTGCTGTAAAAAATAGTTAACAGGGAAATAACTTGAGATGATGGCTAGCTTTGTTTAATGTCTTATGAGATTTTCATGAACAATCCAAGCATAATTGTTAAGAACACGTGTATTAAGTTCATGTAAGTGGAATAAAAGTTTTATGAATGGACTTTTCAACTACTTTCTCTACAGCTTTTCATGTAAATTAGTCTTTTGGTTCTGAAACTTCTCTAAAGAAAATTCTACATTTTTGGAAATTTATTCCTTATTCCCTCTTGGCAGCTAATGGGCTTTTACCAAGTTTGAATACAAAGTTTATCATAACGGTAAAATACTACTAAAATAACTACTACTGTTCCCAACCATGTCCTATACTCCCTCCTCCCCCTGAAAATTTTTTTCAGAGACGGGGAGTTGATTGAAAAAAGTAATGTTATTCCATTTAAAATTTTGGTATATGGCATTTTCTAACTTAGGAAGCCACAGTGTTCTTGGCCCATCATGACATTGGGTAGCATTAACTGTAGGTTTTGTGCTTCCAAATCACTTTTGTTTTTAAGAATTTCTTGGTATTCTTTAGCCTGTCTTCAATTTTGATCCTTTCTTCTTTCTATTTGTCAGGTGCACAGGATTACCTTTTTTAGCCTCTGTCTTGTCACCAACCATTCCTACTTGGCGGCCATGTACTTGGGGAAAAGGCCGCATGATCTTTCTGGCTCCACTCAATGTCTAAGGACACCCTGCTTCCTTTGCTTGCATCCCACAGACTATTTCCCTCTTCCTATTCACTGCAGCTAATCTCTCCTGAGTTGATGAGATTGTGTTATCTCCCTATACACCCTACCCTATCCTGAATGGTCTGTCATTGTCTTTGCCTTTAAATTCCTTCCCCTTCCTCTCTTTAAATAATGATGGGGCTAAGTAATACCCAAAGCTCACCCTACCAACTATTTCCTCAGTACCTTGCAGAAAACACCGAACAAAAATAACCATTTTAAAAGAGGTGTATTTTTTTTTTTTCTTCTAGAATGTAAGCTCCTCAAGAGCAGGGACAATGTTTTCTGTATGTTCTATTGTGCCTAGTACACTGTAAATGCTCAATAAATACTGATGATGGGAAAAAAAAAAATAG EMBV3_20161 CAGAGAAAAGTAGTAGTTCTGAGAGTACAGACAGCAGCGACAGCCAGAGTGAAGAAGGGC Gene GeneID:518738|GPATCH1:NM_001075778:631_cdna Constitutive 1 NULL GeneID:518738 18 GENE GPATCH1 GPATC1 G patch domain containing 1 EMBV3_38310 CCAGTTCCCCATTCCTGAGGTCAAAATTCTAGATCCCGACGGTGTGTTGGAGGAAGCCTT Gene GeneID:531482|MORN3:NM_001040550:219_cdna Constitutive 1 NULL GeneID:531482 17 GENE MORN3 MGC134003 MORN repeat containing 3 EMBV3_31502 GCCACGCTTCTTGGGAATCAGTGTCCAGGGTTGAGCAGAAAAGCAGACAGATCTTCGTGT Gene BVV0102_071641 + 0 NULL GK000011.2:2305244-2323540 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026608 1 XLOC_015077 Coding TCONS_00026608 XLOC_015077 Coding Coding TMEM127 11:2321519-2335203 j TSS19059 3854 3 TCONS_00026608_3 208 0.0552672548002076 5 0.718702039026529 0.00194213893906506 0.000750096404853847 0.000459374317061396 2.60011332550659e-10 0.000294038928960695 0.000449452238345624 6.64123800451974e-05 5.29032818590756e-06 0.000110205997806427 0.000142753727142069 2.94064968655295e-05 5.33289509644494e-12 2.88800890754016e-06 0.000307101600784706 7.91780040982379e-12 0.00474071383525609 0.000172545606616707 0.000364590273924777 0.000194814777430081 0.000375951641782665 0.000207728823743451 0.00275804152632983 0.00095619634926404 0.00171641424503655 0.000880311793760516 0.000158290423181877 0.000263371197059979 0.000305350009586105 0.000243582067375853 0.000143596818193769 XM_003585149.2 LOC100850176 PREDICTED: Bos taurus transmembrane protein 127-like (LOC100850176), mRNA. 0.0 4655 100.00 0.669434353918007 NM_017849.3 TMEM127 Homo sapiens transmembrane protein 127 (TMEM127), transcript 0.0 1678 74.14 0.693824597820446 TCONS_00026608_2 sp|O75204|TM127_HUMAN TM127_HUMAN Transmembrane protein 127; 2e-111 322 98.73 0.928994082840237 0 coding 0 0 0 0 -0.0832227774825397 0.532718741802565 0.0235341016011023 0.744214663371782 CAGAGGTGGAGGAAGCCGGAAGTGGATCGGGCCGGGGTCTGTCCGGGCGTTGCGGGTTTGGGCCCTGAGATCTCTCGGGTCGGGGTAACTGAGGAGCCCGTGACCGGGACGGAACGACGCCATCCCGGCACTGAAGCCTGCTGACTGGCAGGCTCTCTGCGCCCCGCGGAGGTCGGCGGCTACCAGCAGCGACCGCTGAGCGACGGCGGGCGGCCCCGGACATGTACGCCCCCGGAGGCGCAGGGCTACCCGGCGGGCGCCGGCGGAGGAGCCCGGGAGGCAGCACTCTGCCCAAGCAGCCGGAGCGTAGTCTGGCCTCGGCCCTGCCGGGTGCCCTGTCCATCACCGCGCTGTGCACCGCGCTCGCCGAGCCTGCCTGGCTGCACATCCACGGTGGCACCTGTTCCCGCCAAGAGCTGGGGGTCTCCGACGTCCTAGGCTACGTGCACCCGGACCTGCTGAAAGATCGTTCCTAGGAAGGCTTGTAAAATTCCTGCGATGGAGGGAGGGGCCCATCTGATTCCATGTCTTCATTCCAAAGGTCCAGGAAACTGTGTCTCAGAGAAGTGAAATGATCTCTGCAGGGGCACACAGCTGGGAACGGCAGAACTTCTGCATGAATCCCCAGACAGTCCTGCTCCTGCGGGTCATCGCCGCCTTCTGCTTCCTGGGCATCCTGTGCAGCCTCTCTGCGTTCCTTCTGGATGTCTTCGGGCCCAAGCATCCCGCCCTGAAGATCACCCGTCGCTATGCCTTCGCCCACATCCTCACGGTCCTGCAGTGTGCCACAGTCATCGGCTTCTCTTACTGGGCTTCCGAACTCATCCTGGCCCAGCAGCAGCAGCATAAGAAGTACCACGGGTCCCAGGTTTACGTCACCTTTGCCGTTAGCTTCTACCTGGTGGCTGGCGCTGGCGGGGCCTCCATCCTGGCCACAGCGGCCAACCTCCTGCGCCACTACCCCACGGAGGAGGAGGAGCAAGCGCTGGAGCTGCTCTCGGAGATGGAGGAGAACGAGCCCTACCCGGCAGAGTACGAGGTCATCAACCAGTTCCAGCCGCCCCCGGCCTATACACCGTAGTGCCCACCGTGGGCTTTGGTCCTGGGCCGCCCTCCCCACTCTACAGCGCCGCCCCCACCCAGAGGTGCTCCTTTCCCCAGCAGGTCTCACTGGTAGGATCCTGACCACCGCCACCAACCTTCCCCGGGAGAGGCTCTACCTTTGGGGCTGTTCCTGGATCCCCACTCTCGAAACCTGGGGTTCACTGATTTTAGATAACACACTCTTTTCCCTCTTGAACCTGCCTCTCCCTCCACGGTCACTAGTCATTACCAACCAGGGACGGTCATACACGTTTCCCCCTTTGTGGGCCTGATCTCTGAGGCTGAGATTTTTCCCTGGGGTTCTGTTAGCAGTGGACAGTCCCTGATGGAAGAAGCATCCCTGGAGCTCAAGAGAAAGGGGACCATGCCCCGCAGGCTCGCCTTGTAGCTGTCCCCACGTGTCCCCTAGCGGTAACTCTGGACCAAGCCCCTCTCCCGCCCCTTCTGGGAAAACCCAGCACAGGGCCGCCCACTCTGTGGATTTCTCTGCACTTTAGTCTTTGGACTGCCCGTCACATGGGTCCTGTTTTTGCGGGAAGAAGGGATGGCCTCCAGGAAGCAGAGCACATGCCCGCCCCGCCCATCCCTGCTGGTGGCCCGAGACCCGGTGGGGACAGTGGGTCTCCTGAGGCCTGGAAAGGACCAGTGTGAAGAGGGCCGCATCTCCCCAGCCCCATCACCTCTTAAAATGTGAGTGGTTTTAAAAGGGAAAAACAGCCAAGCAACACCACCAATACTCTCTTTTTAAACTAGTGACGAGAACGTCGTCTGTTGATCCCATTCCTTCTGGCCCTGCAGCGTTTGGGGCCACTGTCCCTTCCAGTCCCTGGCCATTGCTCCCCGAATCTCTCCCGACAGAATGCAGCCCTCCTCCGTCCCCCTCTCCCTCCCTCCCAGTGACCGTGGCCCCTGGGGGCCTTCCTGTGGGACCCAGAGCTGCATCATTGCCCGGCGGTGGGCTGAGGACTGTGGCCTGGCTGGCTGGCCAGCGTGGTGCTCCTCAGGACTGCAGCGCTGAGACATAACCTGGCCTCCAAGTAGAAACAGGGGCTGCAGCAGGGCAGGAAGCCCACCGCCCTCCACATAGGAACCACAACCAGGGGACCCCAGCTGCGTGAGGCGTCAGAGCCGCCTGGTCAAGATGAGCAGACCTGCCTGTGTCCTTCAAGCTCGGCGGGTCCCCTGGACTGTGACTTGGGGCGGTGGCTTGCTGCACACCCCCTCCCCTTCTTGAATGTACTCTGGTCTCACAGTGCGCTACCAGCTCTTTCTTGCCCGGCCGTCACCGGCTGTCTTGTTTGCCACACATGGCCCTGGATCAGCTGAGTTTTCTGCCCTGAGACCTGGGGCATCAAGTGGGAGAAATCTGAGCGCTTCGGTGCGGATCCAGATGGCCACGCTTCTTGGGAATCAGTGTCCAGGGTTGAGCAGAAAAGCAGACAGATCTTCGTGTCCTTCACAGGCCATAGACAGAGTAAGACTGGAGAACAGACACCATCGTTGACCTGTGGCTCGAAGGGACTGCCATGTCCCCTGTCCTTCCATGGCCAGACTGCCCACAAGTGTCTAGACAGATGTCCGTGTGGGCAGTGAAAGCCATGCCTGTGCCTGAGTGAGCGGCCTCCTGGGGCTCAGTGTGATGCCAGAGCGTCCCATGGCGACTCAAACTCTTCCGGACTTTTCTCTCAGGCAAGAATGCGTGATACCTGAGCACAGTTATGGAGCTCAAATCAGTCTCATCTTGCTGTAACGTGCGAGTTTGTCTTTGGAGGATTTCCAGGACGTGGACAGCTCTCTCTGACCCTGGGGGTCTGAGCTGGCAGACAGGAGACCGGGCACTGAACACGCATGCCAAAGTGACCGGTCATCTCACGAGGACCCACACCCAGGACCCTGTGAGCCGTTCCACGTGGTTCAGAATCCAGTTTTTATTCACTCCCCAAGCCTCTAGCCTTTCTTTCTCTTTCCCTTGCCCTCCTGACACTGATAGTTGTCATATAAACTCCCCTGGTTGTGTTTTTTTTTTTTTCCTAGGAAAAAAAATTAAAAAGCAAAACAAAACAAAAAACCAGAAACCACAAATAAGAATGCAGTTGCCAGTGGCTCCCTGTCATTTTTCTGTCCCAGTTTCCCCAATTTGGTTTGTTCCCTGCCTGTGGGAGAAGCAGGAGAAATTGAAGAAGGGAGTTCCCCGGCGGTCCTATGACTGGGACTCCACACTTCCACTGCAGGTGCACAAGTTCAGTCCCTAGTCAGGAAACTAAGATCCTCTGTGGCATGGCCACACACACACACAAAACAAATTGAGGAAGTGTGCCATAATTTTTAAAAAGTTAGAAGGAACTTGACCCTGCTTGTTCCATGCGAGGCATCCGCACCTAAACAGTCCTCTAATCCTGACAACTTCCACCCCGAGGTTCCAAGGCTGGGAACCAAGGATGCCTCCCCCCAGGTCTTGACTTCAGACCCTGAGCTCTTCCCTCTATATCCCGTGAGCTGCAGAAGAGCATGGCTTCAGAAGTCCAGCCCTTGTGTGCACAGACTTCAGGGCCAGGACTCGCAGAAGAAGATGCACGTTCTTTAGAAGCCATGGGGAATGATCCCTGATGGTTCCCCACATTCCCTTTATCCATTCACAGTGTCAGCTGGCACCCGGGCCCCAGTGTGCATCACAGCGACAGAGCTCAGGGCTCCCTGGAAGGAGCAGCCCACTTGGCCTTTTCATTATTATTATTATTATTACTGGGGAG EMBV3_23447 AAATCTTCTCCTGACAATAGCAACCCAGCTTCCACCTGGTCGGTGCGCAGGGCGCCAGAA Gene GeneID:507891|LOC507891:XM_002696490:110_cdna Constitutive 0 NULL GeneID:507891 21 GENE LOC507891 NULL similar to ANKRD protein EMBV3_20242 GAACTGAGCAGCAGATTGCCCTGCATTGTGGAAGAGCACCCAATAGGTGAGGCTTCTATA Gene GeneID:281923|MTIF2:NM_174393:24_cdna Constitutive 0 NULL GeneID:281923 11 GENE MTIF2 NULL mitochondrial translational initiation factor 2 EMBV3_20587 AGATCAGTTTCCAGACTGTTTACCACTACTACAGCCGCATGGCCAGCTACCGGAACACGA Gene GeneID:100336972|LOC100336972:XM_002686565:3_cdna Constitutive 0 NULL GeneID:100336972 3 GENE LOC100336972 NULL centaurin, gamma 2-like EMBV3_37884 AAATCTTGGAATGGTTCTCTTTTAATGAAGGTGCAAAAGGCAGTGGAAGAAGAAAATTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10351 AACGCTTCAGTATAGATGGTGGTTTTATGGTTATGAAGAAACCAAGAATATATTGACCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10247 AGAACCGAGAGTTGGGACCCTTGCGTACAGATGTGAAATTAAGATTATTGAAGACGACAC Variant GeneID:281536|TLR4:NM_174198:20_cdna 564^730 1 EMBV3_30380 GeneID:281536 8 GENE TLR4 NULL toll-like receptor 4 EMBV3_15011 GTGCAGAATGAAGAAGCTTGCCCTATGGGAGGTGGTGAAGGCCCCAAGCCTAGAGAAAAT Gene GeneID:516056|BEX5:NM_001075735:17_cdna Constitutive 0 NULL GeneID:516056 X GENE BEX5 MGC128456 brain expressed, X-linked 5 EMBV3_42095 TGTGCCAGGACTGCTCAAGGGGCTGGAGACTTTTGTGGCTGGTGTCATCTTTGCCTTTAT Gene GeneID:526149|LOC526149:XM_002696555:34_cdna Constitutive 0 NULL GeneID:526149 21 GENE LOC526149 NULL similar to myeloid-associated differentiation marker EMBV3_02644 TCCAGACCCACAACTCCGTGACTGTAAAGCAGCCATGTCCTAACGGGTTCTCCTAACAGA Gene BVV0102_246299 - 1 EMBV3_20781 GK000003.2:108916445-108917608 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174650 TCONS_00171248 TCONS_00171251 TCONS_00171250 TCONS_00174651 TCONS_00174649 2 XLOC_104657 XLOC_103778 Coding TCONS_00171248 XLOC_103778 Coding Coding GNL2 3:108892083-108917587 j TSS127775 1864 2 TCONS_00171248_1 134 5 0.92710661490805 0.00086656242021163 0.000966512847573042 0.000567104692119324 0.000709522741449446 0.000945396141735202 0.000153830784204901 0.000222509358758532 0.000469135488029255 0.000552670495998649 1.2956100076904e-05 2.15268194832286e-05 7.1672461073853e-05 0.000142429552152446 5.38875825931763e-05 0.000242226343774975 0.000608321692377364 0.00134679579823531 0.00168660952610996 0.000409895469462627 0.000355791241703255 0.000433392067498382 0.000143183856058776 5.16284520975938e-05 0.00027405457109293 0.00140395105114482 0.000540282643178673 0.00111566710584033 2.16564801901817e-05 4.97693653147662e-05 2.34109151107738e-05 NM_001045967.2 GNL2 Bos taurus guanine nucleotide binding protein-like 2 (nucleolar) (GNL2), mRNA. 0.0 771 100.00 0.228540772532189 NM_013285.2 GNL2 Homo sapiens guanine nucleotide binding protein-like 2 (nucleolar) (GNL2), mRNA. 3e-163 580 86.14 0.266094420600858 TCONS_00171248_1 sp|Q13823|NOG2_HUMAN NOG2_HUMAN Nucleolar GTP-binding protein 2; 4e-74 238 95.80 0.880597014925373 1 coding 0 0 0 0 -0.297005155044072 0.37711607994616 0.0315699515649792 0.681897580105272 GAGTGCGGCGGCGCGCTCCTCGCGATCGCAGGAAGTCGCGCGGGGAAAGAAGGGTGCGAGCGGAAGTGACGTCGTCCCGCACACGCGGTCCAGCGTGGTTCGCGCGAGTTTCCACGGTCCGGTTCGGGAAGTTACGAGCTTTTGTACCCCACGCAGGCCGGGCCCAGCGGTCTGGTACCAGTCCTGTCGGCAAGATGGTGAAGCCCAAGTACAAAGGACGGAGCACTATCAACCCCTCTAATGCCAGCACAAATCCCGATCGAGTGCAGGGAGCAGGAGGTCACAACATGAGGGACCGGGCCACAATTCGACGCCTGAATATGTACAGACAGAAGGAGCGCAGGAACAGCCGTGGTAAAGTGATTAAGCCTCTGCAGTATCAGTCAACAGTGGCTTCTGGCACAGTGGCAAGAGTGGAGCCAAACATTAAGTGGTTTGGAAATACACGTGTGATTAAGCAGTCATCATTACAAAAATTTCAAGAGGAAATGGACACAGTCTTGAAGGATCCATACAAAGTTGTCATGAAGCAAAGCAAGTTACCCGGCAGCAGCGATCTAGAAAAGTCGGCATACGCTACTATGAAACACACAATGTGAAGAATAGGAACAGGAACAAAAAGAAGACCACCGACTCAGAAGGGCAGAAACACAGACACAAGAAAGCCAAACATAAGCAGTAATGTGTTAAAAGTTGTCTATTAAATTATACAAAAATATGCAACTAGAAACTGTTCATTTTCTTCATGACCAGTTGGCATTTCAAAGGCCATGATGCATCTGTTCTGAGATTGGACAGTTGAAACCACCCACCAGTACTAGTGAAAGTAAAGAGAACTCCTCACCCCCAAGGATTTCAGTGATGGAGTCCCCTCGAACTCCTGACAAATGAGTTAGTCCTCTGAGTTCCTAAGAGTATAACCCTGGCATGAAAGTGTCTGACAGAAACAGGGCCGAGGTCTAGAAAATACGGAGTGTGGTATTTATTTTGTACTAGCAATGAGCAGTTTAGTTTGGAATAGAACTGTTTTTGTTTTAATATTATGGATGTTGTGTCAGAGCCTAGACTTTAAAATACGAAGCAAAAGCCTCAGCAGTTCGCAGTGCTCCTCACTGGGTCTGTTAGGAGAACCCGTTTCCTCACTGGGTCTGTTAGGAGAACCCGTTAGGACATGGCTGCTTTACAGTCACGGAGTTGTGGGTCTGGAACATCTCTGTGACCACAGCTCTTCCCATGAAGATGACGGAGCACAGACAGGCTGTTTCAGTGGAATCTGGGGGCTGGTGCCTCAGGACACCTGGATGAGGGCAAAAGCTGTGACTTCAGATTTGAGATGAAAGTATAGGGGGCTTGTTGGACTCAGTGGAACACAGCTCTTCTTGTTGGCCTGCCGTTCTCTGAGGGAGCCTGGAAGCCCTCGCCAGACAGGCGTCAGGTCCGAGCACCTCTTCATGGGAGCACTGAGCACCTAGCACCTTCCAGCGAGGGGAGATGTTAGTGCCTTCTTAGTTATGCTACTTGGGAAGTTTGAATGATGGAACTTAGTCATTTTGCTAGTCTACCCTGAATCAGATTTATGTTGCTAATTTAGTCTTCGGGGTCTGTAAAACGAGAAGAGTTCTGAGCCTCCAAACTTTGAGTCTAGCTTATGAGGAAGAGTAAAATGCAGTTGTCTCCTCGCCATGGCCTGGTCACTAATAATAATGAGAACTGCATGTGAGGTGTGGGCTAGTCAGAGTTGTAGGGCTGAAGTTTGATTTTCTGCAGAGTAAGGTGAAAAGATCCAATCAGTGGGGGAGGAGCAAGGTCCACGCAGCTCACAGTGGACACCTCGACCTGTATTTCTTTCCAGCAGACACTCACT EMBV3_30063 ACGGTTCAGCTCTGCTGTGGAGAACATTTGGCAGGAAAGAGGCTCACAGGGAAGGAAAGA Gene GeneID:617899|POLD4:NM_001076481:125_cdna Constitutive 0 NULL GeneID:617899 29 GENE POLD4 NULL polymerase (DNA-directed), delta 4 EMBV3_21772 TAGGCACATACAGAAGAGGCTCTACTCTGGTATGCCCGGGCCTCCACCGTGCTCTCCGTG Variant GeneID:510097|FOXRED1:NM_001034371:14_cdna 189^409 1 EMBV3_27169 GeneID:510097 29 GENE FOXRED1 H17 MGC140470 FAD-dependent oxidoreductase domain containing 1 EMBV3_14380 TGGGAATCCATAAGCCATGCAACTTAACCATTTAAGCCATTCCAGTCCATCCCAAGCCAG Gene GeneID:509591|RBMX:XM_002699591:89_cdna UTR3_Alt 2 NULL GeneID:509591 X GENE RBMX NULL RNA binding motif protein, X-linked EMBV3_06312 CCTGCTGGGAAGTAGAAGAGTACCTCATTAAAAAAGATGCCTCCCAAGTTCAAGCGCCAC Gene GeneID:616923|VAMP4:NM_001076438:117_cdna Constitutive 0 NULL GeneID:616923 16 GENE VAMP4 NULL vesicle-associated membrane protein 4 EMBV3_42311 CACATAGATATGGGATCTGGAAAGATGGAACTGATGAACCTATCTGTAGTGCAGCAGTGG Gene BVV0102_440855 + 1 EMBV3_05703 GK000010.2:11652283-11773686 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37237 GATGAACTTTCTAACCTGAAGAAGAACAGGATACATTGGATGAGCTGAGGAAAGAATATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04462 ACATCGATCCGCAGGAGAAGCAATAGGAAAAGATGGATGAGCGATGGTGACTCTTCAGAC Gene GeneID:100140338|LOC100140338:XM_002685675:460_cdna Constitutive 0 NULL GeneID:100140338 2 GENE LOC100140338 NULL similar to nuclear antigen Sp100 EMBV3_00013 AAGTCCACTGTATCGTTCCCAGGCAACATAAAAGTGGATGATTTATACACAGAACACCTG Gene BVT0102_108946 + 0 NULL GK000005.2:23774519-24072281 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191053 TCONS_00191042 TCONS_00191040 1 XLOC_116797 Coding TCONS_00191040 XLOC_116797 Coding Coding SOCS2 5:23523815-23821121 j TSS143231 2018 1 TCONS_00191040_3 398 5 0.993229175425909 0.000280192308146642 7.91997839713284e-05 0.000248508729857524 2.55420502083792e-123 6.24269464573155e-149 1.39579499566229e-79 2.76999296475814e-05 0.000337923559226378 2.40717517993751e-13 0.0001852302423841 1.78901187132594e-15 7.55467690490855e-26 6.07870600510415e-27 2.1380442378905e-28 1.57017280966372e-22 0.00106866179702977 2.57803258507522e-57 1.13915735602865e-16 9.44329036562881e-05 0.000459866063373739 0.00116306629345341 6.78932632993333e-06 0.00131181496820343 0.000304147272820707 0.000196391296564046 0.000426994420682563 0.000151286606300594 1.00304890141706e-07 7.06385998607744e-05 6.26215049749513e-05 XM_005206101.1 SOCS2 PREDICTED: Bos taurus suppressor of cytokine signaling 2 (SOCS2), 0.0 1824 100.00 0.500495540138751 NM_001270468.1 SOCS2 Homo sapiens suppressor of cytokine signaling 2 (SOCS2), transcript 0.0 1269 87.21 0.504459861248761 TCONS_00191040_3 sp|Q861R0|SOCS2_BOVIN SOCS2_BOVIN Suppressor of cytokine signaling 2; 7e-145 414 100.00 0.492462311557789 4 coding 0 0 0 0 0.0401237323135004 0.710994165020152 0.0160499525963923 0.807870402625892 ACGGACGTTTAACTCTAGTCTCGCCGCCGCCGCCGCGGCTCGCGGGCCCTGGGCTTCCCCTGAAGCATGAGCCTCCTCGCCCGCCGCCACTGGCGCTGCGCGGGCCACGGACGGCGCGCGCCGGGGCCCCGGGTGCACGGCCTCAGGATCGCCTTCGCCTGCAGCTGGGGCGCCAAAGGAGCTCGGGCCGGCGGCAGGCTAACTGTGCGTGAACGCGCCTGCGGGGGATTTGGCCATCGGTGCACCGGAACCCGGGGAGGAAGAGCCTGCAGCGCCCCATCCCCACCCTCTCCACCACCATTTCGGGGACCCCTCAGGGAGTGGTTTTGGGGTTCCCACTGACTTCTAAGAAGGACGCGTGCCTTTCTCCGACCCCAGCTCGGGCGGCCACCTGTCTTTGCCGCGGTGACCTTTCTCCCATGACCCTGCGGTGCCTCGAGTCCTCCGGGAATGGCGCGGAAGGGGCGCAGAGCCAGTGGGGGACCGCGGGGTCGGCGGAGGAGCCGTCCCCAGAGGCGGCGCGTCTGGCGAAGGCCCTGCGGGAACTCAGTCACACAGGTTGGTACTGGGGAAGTATGACTGTTAATGAAGCCAAAGAGAAGTTAAAAGAGGCACCAGAAGGAACTTTCTTGATTAGAGATAGTTCGCATTCAGACTACCTACTAACAATATCTGTTAAGACATCAGCTGGACCAACTAATCTTCGCATCGAATACCAAGATGGGAAATTTAGATTGGACTCTATCATATGTGTCAAGTCCAAGCTTAAACAATTTGACAGTGTGGTTCATCTGATCGACTACTATGTTCAGATGTGCAAGGATAAGCGGACAGGCCCAGAAGCCCCCCGGAACGGCACTGTTCACCTTTATCTGACCAAGCCACTCTACACATCAGCACCACCCCTGCAGCATCTCTGTAGACTCACCATTAACAAGTGTACCAGCACCGTCTGGGGACTGCCTTTACCAACAAGACTAAAAGATTATTTGGAAGAATATAAATTCCAGGGGGAAATGGAGGCTAGAGACAAGCAAGTGCTTCGCTCCCTTCGCCTGGAGTTGGGTGCAGAGGTACTGGTGGAGGGGCTAGTCCTCCAGTATCTTTATCAGGAAGGGGTCTTGACAGAAAGCCACGTTCAAGAAATTAAAGCTCAAGCCACAGGCCTCCGGAAAACAATGCTACTGCTGGATATCCTACCTTCCAGAGGTCCTAAAGCCTTCGATGCATTCCTAGATTCCCTGCAGGAATTCCCTTGGGTAAGGGAGAAGCTGGAGAAGGCAAGAGAAGAAGCCATAGTTGAACTGCCTGCAGATGACCGGATGACTGGAATCCCCCCGCACATCCTGCACAGCTCCCCGTCCGACCGGCAGATCAACCAGCTGGCCCTGAGGCTGGGCCCTGAGTGGGAGCCTGTGGTGCTGTCTCTGGGGCTGTCCCAGACAGACATCTACCGCTGTAAGGCCAACCATCCCCACAACGTGCAGTCCCAGATGGTGGAGGCCTTCGTGCGCTGGAGGCAGCGCTTCGGGAAGGAGGCCACCTTCCAGAGCCTGCACAGGGGCCTCCAGGCAGTGGACGCGGACCCCTCGGTGCTCCAGCACATGCTGGAATGACTGGGCCCTCGTCCCTGCTTGGGGCTAGTCACATGGCTGAATCGTGACTCTCACCAGGGCAGGTAGACTTGGGGGTGGGGTTGTTTGTTTGTCATGGTGATTTTTAGATGAGAGGGCATAGTGGAATTTGCACTTGATGTTACCTGACAAGTGGGATTACTCAGGAGGTTTGCCGGAATGAATTGACAATTGACTTTCTAATCGCTCAAATACGGCATTTTTTGAATTGTGCAGGTTTTAATTGTGTGGTTGCCTTTTAATAGACTGGTGAGTCCTACTGGTTCAAAAAAAAAAATACAGGTGTTCTGTGTATAAATCATCCACTTTTATGTTGCCTGGGAACGATACAGTGGACTTAACTATTAATGATGATAATAATAAAAACAAATTGCTGTATATAAT EMBV3_37211 TGACAAGAATTGAAGCTGGAAAAACCCTTGGCTATAGCCGTTTGCATGGAAAATGGCAAT Variant GeneID:519474|TERF1:NM_001076865:31_cdna 443^564 5 EMBV3_40087 GeneID:519474 14 GENE TERF1 NULL telomeric repeat binding factor (NIMA-interacting) 1 EMBV3_08887 CTTGTCGCATGTCAATCACACGTCGGAAAGTTGAGTCCCTTTGCTTCCGTGTTCTATGTC Gene GeneID:540355|HS3ST5:NM_001076215:7_cdna Constitutive 1 NULL GeneID:540355 9 GENE HS3ST5 HS3ST6 MGC139532 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 EMBV3_43161 CACCGCAACTAGAGAAAGCCTGCACACAGCAACTAAGACCCTGCCCGGCCAAAAATAATT Gene GeneID:511125|RNF135:NM_001098936:241_cdna Constitutive 2 NULL GeneID:511125 19 GENE RNF135 MGC159982 ring finger protein 135 EMBV3_26745 CTGCTCAGAGGCTGAGAGTCCAGCGAGGTTGCAGGATTACAATCTATGGGATTTTTCAAC Gene BVT0101_036730 + 1 EMBV3_02651 GK000028.2:45418795-45900066 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162807 1 XLOC_099688 NonCoding TCONS_00162807 XLOC_099688 NonCoding NonCoding - 28:45424918-45425921 - TSS122139 1003 2 TCONS_00162807_1 54 1 0 0 0 0 0 0 0 0 0 0 0.000135371903797851 1.1411674089083e-05 0.000340456397488351 0 3.75194026825613e-05 0 7.89976755352312e-05 1.6552618299302e-05 0 0 0 0 0 0 0 0 0 0 9.57644404136662e-06 7.26013828245433e-05 0.000191816399053365 XM_005226615.1 CXCL12 PREDICTED: Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), 0.0 1810 100.00 0.999002991026919 NM_000609.6 CXCL12 Homo sapiens chemokine (C-X-C motif) ligand 12 (CXCL12), transcript 7e-142 508 72.08 0.986041874376869 0 noncoding 0 0 0 0 -0.0648929873653997 0.574949818334481 -0.0156257417107637 0.744373263989661 CTTGCAGTTGCTCCTAAGTGGAGACTGCCCAGCTAAAGCAAATATGCATTTAAATAGTCCATTTGCACAGGAAAAGGCTCTCTTGATCCCCTTTTGCTTTCAAAACACAAATCCTGTGCATCACTTTGATTAGGGAGTACCCAGCTGTCCCTCCTGATCCAGTGCTGCCCCTCCCTGACCTTCCCTTGTGCTCTGCGCAGCCTCCAGGGTGGTCCTCCACCACCAGCCTTTGCATCAGGACCCAGGCAGGGAAGACGGGGGCGGCTGAGCTCGCAGATGTGCTGCGTGTTGGAATCTGAATCTGTGCCTTGTGTTGTTTGCGCTGTTTTGCCCCACTCCGGCCAGGTGCTAAGACCCCAGCGAGGCTCAGGAGGGGCCCTCTGCTTATCTGCCAGTCCTCCAGAAATAGGAGGGCCAGCTTTGAGGAGAGGGCCTGAGTGACAGAAGGTTGTAGCTGCCCGTGTGAAGTCCAGAGAGCGTAAGCCCTGTCACTGGACCCAGTCTGACCTCCTTTTCTGACGGCTGCCTGGTGTAATCACTAGGAGATCTCTCACTGGGAGTTACCACCTTCCCCCGGTGGTACCCCCTTTTGTAGCTGGATGAGAACTGTGGGGTCCTGATCCCTCTGCATCTTCGCTGGGAAATTTCCCATCCCTTGGAAATATCCCTTAGAAAAACCTTCATGTCCCCTAAGGAGACCACTGACATTGCCAAGTTGAAAAATCCCATAGATTGTAATCCTGCAACCTCGCTGGACTCTCAGCCTCTGAGCAGTGATGGGTTCAGTGTTAAATGTGATAAATACTGTATTTTGTATTGTTTAAATGGCATCTCCCACAAAATGTGAAAATGGTCCCGGAGAAGGCAGCTTCCTGTATGCAGTGTGCTTTTTAAAAAAAAAAAAAAAAAACAAGTAACAACTCCTTTTGAGAAACAATTTCTACTTTGAAATCATATCAATGAAAAGATGTATATGCACTTATAATTTTCCTAATAAAGACAT TCONS_00159846 . 3' 397 TCONS_00159846 . 3' 1399 EMBV3_16067 GGAGGCGCAACTGACACTCATAGGCTTCACAAAGAAGGGAAATTGCTTCCACTGGTTCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09769 ATGCCGCCCTGTGGGGGTCGAGAATTCAGGCTCCTCAGATCACTACAGGCATTCAGCTTT Variant GeneID:527379|ZMYM1:XM_002686484:564_cdna 182^418 2 EMBV3_36059 GeneID:527379 3 GENE ZMYM1 MGC127968 ZNF262 zinc finger, MYM-type 1 EMBV3_42864 AATAACCAAGTGCCGGCTTACAGAATCAGACTTGACCCACGTGTCCCAGAGCCCAGACAT Gene GeneID:789126|LOC789126:XM_002694073:285_cdna Constitutive 0 NULL GeneID:789126 16 GENE LOC789126 NULL similar to hCG15295 EMBV3_39135 TTGTCTGTGGAGACTGATTACACCTTCCCACCGCAGCCCCAGCCAAGGTTGAAGCAAAGG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 841^937 11 EMBV3_42456 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_29236 ACAAGGGCTGTAGATTGGTGGGGCCTTGGTGTCCTTATATATGAAATGCTCGTTGGTGAG Gene GeneID:519754|PKN2:XM_002686251:40_cdna Constitutive 0 NULL GeneID:519754 3 GENE PKN2 NULL protein kinase N2 EMBV3_09130 CTGCAGGACGAGGGCAACGACGAGTAGAATCCAGTCTGCCTCTGTTAAAGGTGAATTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08840 TCTCTTTCCCTGAACCACCCCCCGGCTCCAGGTTCTACAGGCGAATTGCAACCAAGTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05267 CTTCCTCATCTAGTGCCAGCTCTGACTCCTCCCAGTACAGGTCACCGTCTGACCGCGATT Gene GeneID:100337214|LOC100337214:XR_083716:193_cdna Constitutive 0 NULL GeneID:100337214 7 PSEUDO LOC100337214 NULL lipid phosphate phosphatase-related protein type 3-like EMBV3_05834 GCTTGTGTTGGTAAACAGCTTTAGAGGATCCCAAGACCAACTCGACCTATGTATCTCATG Gene BVT0102_177414 - 0 NULL GK000020.2:29567229-30072211 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116773 1 XLOC_070939 NonCoding TCONS_00116773 XLOC_070939 NonCoding NonCoding - 20:30064518-30065204 - TSS87241 686 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000308006670902107 0 0 0 0 0 5.40865779978785e-05 0.000147105812683102 0.000122191108223615 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.281332267122579 0.0742418016908848 0.0169420339461428 0.756827033646177 ATATGTATTTTCTGGGAAATTTATTAAACTGAAAAATTAAGGAAAAATCACACTAATTTTAATCACCAGGCCTATTCCCAGTTACAATGGTGATGTTAACAGTTCAGCTATGAAACACAAAACTGAAATCGTATTGCAATTTTTAATGTGCTTATAAATATATTTATTTCCGTGAAACTTGATGAGGTCATCTAAGGAAAGATTATGAATAAAAAAGATGGCGCCTAGAGCAGGAGTCTGTGGTATACAAATATTTAAAGAAAAATTAGAAGAACACCAGAGAAATGTGAAAGAATGGTCCAAGAGATAGGAAGAAAACACAAGATGTTCCACTGAAGGCAATAAAAGACGCGACTTTAAGAATGGATAGTCATCCACCCCTTCATCAAAGTCAAGTCATTCACTAAAGTCAAGTCAGAGAACTGTCCAGTGATTTTACTACATGAAGGTTAATGATGGCTTGTGTTGGTAAACAGCTTTAGAGGATCCCAAGACCAACTCGACCTATGTATCTCATGAGACTCAACTATAAAATTCCTGAGTTAATGAGCTAAACAAGCCTTTCACAAAATAAATGTATAGCAATCAACAGTAGCTATTACAAAGCCATTTTGAAGCGATAAAAGCTATAATTAAAATGAAAAATTCATTCTCAATTACACAAAAATTTAGGCATATATATGAAA TCONS_00114893 . 3' 7008 TCONS_00114893 . 3' 7693 EMBV3_10197 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01487 CTCTCTCCTTACTGGTACAGAGTAAATTAAGTTTTAAAAAATGTAAGCCCGTGTCAAACG Gene GeneID:100297291|LOC100297291:XM_002698581:159_cdna Constitutive 0 NULL GeneID:100297291 26 GENE LOC100297291 NULL hypothetical protein LOC100297291 EMBV3_17806 AGACACTCGCCTGCTGTCATGTCTGGATGGGTGTTTTCCTCTAACTTGTCAGTTGCGTGC Gene GeneID:509921|SKA3:NM_001110067:34_cdna Constitutive 0 NULL GeneID:509921 12 GENE SKA3 C12H13ORF3 MGC137359 spindle and kinetochore associated complex subunit 3 EMBV3_26926 CTCATTTAATATATTAAAGGTGATAAGTGGGCTAGCATAATTGATATTAGGCATACCTGC Gene BVV0102_072980 + 0 NULL GK000021.2:41961281-41964001 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121236 TCONS_00121237 TCONS_00121233 TCONS_00121239 TCONS_00121234 TCONS_00121240 TCONS_00121235 TCONS_00121232 TCONS_00121238 1 XLOC_073378 Coding TCONS_00121240 XLOC_073378 Coding Coding STRN3 21:41962360-42071111 j TSS90384 5594 1 TCONS_00121240_6 713 16 0.948708045977012 1.24435890842754e-08 6.12943896393812e-09 0.000136541326647202 1.13189061430866e-05 0.000262196408179557 4.99769864561405e-05 0.000100299595163094 9.2984482236863e-05 0.00012663153045489 5.9941559829671e-10 9.21750749771537e-24 5.26829844721387e-13 4.2240312125336e-09 1.52547200389789e-08 2.43928439824678e-13 0.000288092081391689 0.000127422848076264 0.000869837012703415 4.72570730629375e-07 0.000138570089445063 3.04868952272189e-07 1.03520960553963e-14 0.000116845405040487 0.000199522643549979 0.000149424448122749 9.26650598067517e-07 2.62796284317337e-05 4.48976791783302e-05 6.35289757846976e-11 1.25648535991297e-07 XM_005222047.1 STRN3 PREDICTED: Bos taurus striatin, calmodulin binding protein 3 (STRN3), transcript variant X4, mRNA. 0.0 7324 100.00 0.725777618877369 NM_014574.3 STRN3 Homo sapiens striatin, calmodulin binding protein 3 (STRN3), 0.0 5966 93.20 0.700750804433321 TCONS_00121240_6 sp|A5D7H2|STRN3_BOVIN STRN3_BOVIN Striatin-3; 0.0 1072 75.03 0.99859747545582 2 coding 0 0 0 0 2.32973115515916 0.0435462749503339 -0.0171889424817349 0.753313794335132 CGGCGGCATCGGCGTTCTCTACCCAGCATGCTGCGCGGGAGCGGCGGTCCTACGTCTATCCCCTTCCCAACCCTGCCCCCGCTTCCCACTCCCGTCGCGGCCCCCCCTTCCCCTAAAGTGAGTGAGTGAGACGGGCAGATGGAGGAGGGACTGTAATGGCGGCGGCCGGCAGCTCCCTGCTCTGACCCACGGCAGGCATACAGCAACGACCCCCTCCCTGCCCCTCTCTCTGCCGGCCTCCGCCCCGCCGCTAGCGCGGGGCCACCCTCTCCGGCCCTTCCCCCAGCCGTCGGCGTCTCGCCCTGCACCCCGGCCGGGGCCCCACACACAATGGACGAGCTCGCCGGAGGCGGTGGTGGCGGCCCGGCGATGGCGTCCCCTCCACGGCAGCAGCAAGGACCCGGGGGGAACATGAGCCTTTCGCCAGGGGGGAATGGAGCGGCGGGCGGCGGGGGTCCTCCGGCCACCGAGGGAGCGGGTCCCGCGGCAGGCCCCGAGCTGTCCCGGCCGCAGCAATACACTATCCCAGGGATCCTGCACTACATCCAGCACGAGTGGGCTCGGTTCGAGATGGAGCGGGCGCACTGGGAGGTGGAGCGGGCCGAACTACAGGCTCGGATAGCATTTTTGCAAGGAGAAAGAAAAGGTCAAGAAAACTTGAAGAAGGATTTAGTAAGAAGAATAAAGATGTTAGAGTATGCATTAAAACAAGAAAGGGCAAAATATCACAAATTAAAATATGGCACAGAACTGAACCAAGGTGACTTGAAAATGCCAACCTTTGAATCAGAAGAAACCAAAGACACAGAGGCTCCCACAGCACCTCAAAATAGCCAGTTAACGTGGAAGCAAGGCAGACAACTGTTAAGACAATATCTTCAGGAAGTAGGTTATACAGATACAATATTAGATGTACGATCTCAGCGGGTAAGATCATTACTTGGACTGTCCAATTCAGAACCAAATGGATCAGTAGAGACAAAGAATTTAGAACAGATCCTGAATGGAGGTGAATCTCCTAAGCAAAAAGGACAAGAAATCAAAAGGACTTCTGGTGATGTTCTTGAGACATTCAATTTCTTAGAAAATGCTGATGACAGCGACGAAGAAGAGGAAAATGATATGATTGAAGGCATCCCAGAAGGAAAAGACAAACATCGGATAAATAAACACAAAATAGGTAATGAAGGCTTAGCTGCTGACCTAACTGATGATCCTGATACTGAGGAAGCACTGAAAGAATTTGATTTTTTAGTAACTGCTGAAGATGGTGAAGGAGCTGGAGAAGCACGAAGTTCAGGGGATGGCACAGAATGGGCTGAACCAATAACGTTTCCATCTGGAGGAGGCAAGTCATTTATTATGGGTTCTGATGATGTTTTGTTAAGTGTACTGGGCCTTGGAGACCTTGCAGACTTGACGGTAACAAATGATGCAGACTATAGTTATGATTTGCCTGCCAATAAAGATGCCTTTCGAAAGACATGGAATCCCAAGTATACACTACGTAGCCATTTTGATGGAGTTCGAGCATTAGCTTTTCATCCTGTAGAACCTGTGCTGGTTACTGCCTCTGAGGACCATACTCTGAAACTTTGGAACTTGCAAAAAACAGTTCCTGCCAAAAAGAGTGCCTCTTTAGATGTAGAGCCTATCTACACATTTAGGGCCCACATTGGCCCTGTTCTGTCACTAGCTATCAGTTCTAATGGAGAGCAGTGCTTTAGTGGTGGTACCGACGCGACTATCCAGTGGTGGAATATGCCTAGTCCTAATGTGGATCCATATGATACATATGAGCCAAATGTTCTAGCTGGCACTTTAATTGCTCATACAGATGCTGTCTGGGGTCTTGCTTATAGTGGCATAAAAAACCAATTACTGTCTTGTTCAGCAGATGGCACTGTTAGATTATGGAATCCACAAGAAAAATTGCCATGTATTTGCACTTACAATGGAGACAAAGAGCATGGAATACCTACATCAGTTGACTTTATAGGCTGTGATCCAGCTCATATGGTGACCTCTTTCAACACTGGTAGTACAGTAATTTATGATTTAGAAACATCACAGTCATTGGTGATGCTTTCATCACAGATGGATTCTGGTTTACAATCCAGTAATCACATTAACAGAGTAGTAAGTCATCCCACACTTCCTGTTACAATAACTGCTCATGAAGATAGACACATCAAATTTTTTGACAATAAAACGGGTAAAATGATCCATTCTATGGTAGCTCATTTGGATGCTGTTACAAGCCTAGCAGTAGATCCTAATGGAATCTATTTGATGTCTGGAAGCCATGACTGTTCTATTAGATTGTGGAATTTGGACAGCAAGACATGTGTGCAGGAAATAACAGCACATAGGAAGAAACTAGATGAATCAATTTATGATGTTGCTTTCCATCCATCAAAAGCATACATTGCTAGTGCAGGGGCTGATGCCCTTGCCAAAGTATTTGTGTGAATCAACAGAAACTCTCACCATAACAGCAGATTTGCTTGGACACAAAGGGTCTGCATCACTGCCATCAAAAAAGTTAATGATATGACACTACATATGATCTGCCTGGTGAAGGCTATTTGGGCAGGCATAAATTGGTGGAAATCACATCTTAACGTCAGGCTCATTAATTTAATTGTAATTACTGTATTTCGTGGGACAAAAAAAGGACTCCATTATTTGTGGCCTGTACTGGATATGAACTGAGCGTATGTCTGTCTTTTAGGTATCTTTAAGCCAATGTGGAGTCTGATCTGATAAAAAGACTTTTGTTTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTTGTTGGGGGGAAGTGAGCTCCAAGAGTAGCTTTTTTCATCTCTTAGTGATCTTCTGTTTATCGGTTGAATGCCACAGATTCCCTTTTAAACTTATTTTGCTTTAAAAAAAAAAAGAAAGAAAATTTAACTTAAGATATTTTAGCATTAGTTGCACAAAATGTTTGGATAAAATTCTAGTTTTTATAAGTCTTTTTATATATTTAGCCTGTCACAACAGTGCTCAAGATTGTATTGAAGTTTTTCTGCATTATACAACCCTGAAACACAGAGATCTCACTGACCCGCTGCCGCGTAACCACACTCTTTCCTTCTTTTGCATAATATGGCTCAGCTAAGTCTTTCCATAAAGATGCTAAATCACCATCATCATCACCGTAACTGTCTTCTTAAACCAAGGACTATTAAGTGTATTAAAATGAAACGGTGGGGTTTAGTACTCCAAATGAACTCTTAAAAAATAAAAAAATAAAAAAACTAATCTTGGCATCCTATCACTATGTGATATTTTGTACATCTTACTGTATTTACAAGTTTATTTATCAAGGATTATCCATCTTGCTAATAGCCTATTATTTATTTCACTTTTTGTTGGTCTTTATATCCTTTTATTAATGTGCTAAAGGAACCTGTATATCTATTTTGGAACTCTTTGATAGTCTAAAATAGACTAAAAATGGAATATTTTATAGTTTAAGCTACAAACCAAGGTGACTCCCCCTAGATACATATCTTGGTTTACCATGATTCCAGACAAAACTATCTTGTTTTAAAATATTTGGAGTAAAATTTGAAATACAAATAGGATACAAAAATAGTTGAATCAGGATACAGAAATCTGCTGTGTTTGGACTAGTTATCCCTGTTTTATTTTTTCAGATGTGCTTAATTTTATGGTGTAACTAAAGATTTTGTTTGTGTAATGCATGATTAAGACAATAAAGTATTTTTTCTAGTCTTCCAAAAAACTTTTCTGATCAGTTTGCGAGTTTTGATGAGTTTTGTAAGGTTTTTGTTTTACAAACTATGAATCAGCAAATTTTTAAGATTGTACCACATAGCAAACGTACCGCTGTTGAAAAATAATGTATATAAAATGCATATAATAAATATTAAATTGTGTACCTGTATGTTACTGTTGGCTACATTATTTTGTGTTAAATAATAAAGTGCAATACTTTATTCTCCATTGTTAAACTAGGTAATGGAGATGATTTCTCAGTGAGTCCTTCATTTTTATGCTCTTCTTTTAAATTTTGTACTGTTTATTGATAATCTTCAACAAAATTAGAACAGTTAATACTACTAAGAATGTTTTTTTAAAGTATTTCACCTCATTTGGGGATTAAAAAAAAAAATTATTGACATTTAGATAATTCAAAATAACCCCCCCAATAAAAACAAGTTGCAAAGACACAGTTTTATATCATATCCTTAAGATATCCTACTGCTTTATTAAAGTCTGAATTTCAGTTAATATTGTTGTTTTTCCTATCTAGCCAAACCTATTTCCCACAGAAGAGTTCAGCAGAGAATAAACTGTATTACTCATTAATTAAAATTTATCCTCATAAGTGATGTTAAGTATTAGTATCTTCAGACTTTTCCTTCAACAAGTAATATCCTTTTTCTTTGAAGGGAATTACAAATGGACTTAGAAGGTAACATTAGAAAACTTTGAAAACATTAGAAAAACTTGGCAAAATCTATTCTAATATGCTTAATGGTAGGCATTCTATGCCTACTGCAAAAAAAAAAAAATAAATACATTATACATACTTTGAGATATTTTGCCACCTACCATAAAAATTCAAGTGGCAATTTTAGTCATGGCTGGTGAAACACTAAAACTTTTCAAAAGTTTTCCTTAAAATACTGGGGTTTTGGTTTTCTCAGTTGAAGATTCAACTTAGAGATGCATTTTGTTTTCCTCTCCCCTCCACCCCTTTGTTTTTAAAATAATTTAAGAGCAAGCTTTCCAAAGCTTAATATTGTTTCTGGCAGCTGTTCCAAGGCAATGGTTACTGTTTTAACTGAAATACGATTATCGTTATGGCAATGCATAAACACCATTTTTGGAATGTGTTAAAACTGAAATGCATAAAAACAGTATCAGTATATGTTTTTCTCTTATCTACTTTGGTTGTATTTTCTCTACAATATTAAACATTTGGAAGAGACTAAAAGGATGCAAAAGAATATCATTTTCATTTTGTGTGCTTTCATTTGTGACTTACAGGAAATTATGTAGATTCATTTGACTAGTAAATGATTTATATGTAAAGTTTAAGAATATTTTTATATACAGACTTTGACATGTTAACTTTTTCAGTATTTAATATTCTTTTCATATTATTCATGTACTTTTTTCATGTTCTCTAAGTTATCCACTGAATACCAAAGTCTCATTTAATATATTAAAGGTGATAAATGGGCTAGCATAATTGATATTAGGCATACCTGCAAAGTTTAATTATATCGTTTTAAAAATCCTCTTTTTAGTTGTTAACCCTTTGACTATGTTTACCTCAAAAAAGTTGATAGTAACTTAAAATGTTCATTTATGCTCTATTCTTGCTCTTCAAGTCAAAATATAAGCTTCCCTGGTTACCTCAAAACTTTTGTTCCTTGTAAAATTTTTAAAAGAGCTAATGACTAGAGGATGGGGATTTGTTTAAATATTTTAAAGAGTGGTCTTCTCAGCTGAAAGTTGTCTATTGTGGAAAAAAATGTTAAACCTGTTTTTCTGTTGCTAAATGAAAGTTCTTGTT EMBV3_03662 CGGAGGAGTCTAGGCATGCGAGAGAAGAAGATGAAATTTTGGCAAGAATATTCAGTTAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12109 CAACAGCAGTCAAATTATGGACCCATGAAAGGGGGTAGTTTTGGTGGAAGAAGCTCGGGC Gene GeneID:781499|LOC781499:XR_083648:66_cdna Constitutive 0 NULL GeneID:781499 4 PSEUDO LOC781499 NULL similar to heterogeneous nuclear ribonucleoprotein A3 EMBV3_02386 CTCAGAGGATGATGAGGACATGCAGGACATTGGAAGGCAACGAACAGGATCAGGACCAGT Variant GeneID:505356|C15H11ORF51:NM_001034243:137_cdna 308^366 3 EMBV3_19859 GeneID:505356 15 GENE C15H11ORF51 MGC128633 protein HSPC020 homolog EMBV3_40347 CGTTCATCAGCCACAGCAATGCAACGTGGAGCCACAAATGGAAAAGCTTGCTAAGTTTCC Gene BVT0102_056679 + 1 EMBV3_25332 GK000006.2:27512884-27535298 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202880 TCONS_00202878 TCONS_00202881 TCONS_00202879 TCONS_00202885 TCONS_00202877 TCONS_00202883 1 XLOC_124056 Coding TCONS_00202879 XLOC_124056 Coding Coding TSPAN5 6:27351715-27516551 j TSS152115 4826 1 TCONS_00202879_2 244 0.030874430169913 8 0.970770770770771 0.000616216684019739 0.002582876180089 0.0018658641007388 0.000829487937468852 0.00063242672070219 0.000610816554161419 0.00105430365614072 0.00118345772056134 0.000970708435070831 6.15821319215193e-08 8.39174628775303e-08 1.33435878159484e-07 0.000819864037879106 0.000508975694271482 0.000561955123373091 9.96940413068335e-07 1.77844232444801e-17 5.56568978330552e-08 0.00145628487254416 0.000377175314534933 0.000352469539815448 1.6698813865828e-08 8.49234673283501e-09 6.27228204982141e-07 0.00107969435452182 0.0014625567167241 0.000983343904614374 1.26763343864581e-12 4.34336832371335e-10 2.10468719522147e-10 NM_001076119.1 TSPAN5 Bos taurus tetraspanin 5 (TSPAN5), mRNA. 0.0 1837 99.90 0.211355159552424 NM_005723.3 TSPAN5 Homo sapiens tetraspanin 5 (TSPAN5), mRNA. 0.0 2188 76.57 0.596145876502279 TCONS_00202879_2 sp|Q17QJ5|TSN5_BOVIN TSN5_BOVIN Tetraspanin-5; 9e-174 484 100.00 0.983606557377049 1 coding 0 1 1 1 -3.71662737571343 0.00575002560658317 -0.0317027433018555 0.611208978362802 CAAAGCAGGGACAGCTGGTGTTCTGGGCGCAGAGCGTCTCCGTGGGCTCCGCGGTTCCGGCCTCGCTGTGTGGGGAGAGCGCGAGGAGGGGACGGCGGCGGGCGTCCTGGCGGATTTGATGTGTTGAGGACGATGGAGAAGTTTTTGGGAATAGCATTTCTTGGAATCGGACTCTGGGCGTGGAATGAAAAAGGAGTTCTGTCCAACATCTCTTCCATCACCGATCTCGGCGGCTTTGACCCCGTTTGGCTCTTCCTCGTGGTGGGAGGAGTGATGTTCATCCTGGGATTTGCTGGGTGCATTGGAGCTCTGCGGGAAAACACTTTCCTTCTCAAGTTTTTTTCTGTGTTCCTGGGAATTATTTTCTTCCTGGAGCTCACTGCTGGGGTTCTGGCATTTGTTTTCAAAGACTGGATCAAAGACCAGCTGTATTTCTTTATAAACAACAACATCAGAGCATACAGGGATGACATAGATTTGCAGAACCTCATAGACTTCACCCAGGAATATTGGCAGTGCTGTGGGGCTTTTGGAGCTGATGATTGGAACCTAAATATTTACTTCAATTGCACAGATTCCAATGCAAGTCGAGAGCGATGCGGCGTGCCCTTCTCCTGCTGTACTAAAGACCCCGCGGAAGATGTCATCAACACTCAGTGTGGCTATGATGCCAGGCAAAAACCAGAAGTTGATCAGCAGATTGTAATCTACACAAAAGGCTGTGTGCCCCAGTTTGAGAAGTGGTTGCAGGACAACTTAACCATTGTGGCTGGTATTTTCATAGGCATTGCCTTGCTACAGATCTTCGGGATCTGCCTGGCCCAGAACCTGGTGAGTGATATAGAGGCTGTCAGGGCTAGCTGGTAGAGCGCCTGCCACAGCCACTTCCAGACACTGGACAGACCCAGCCTTCCTGACCCTCCAGTGCGCCCACCTGATACCCATGCTGCACGGACTCTGATCTCAGAGGCATCCCGCAATCCCAACTGATGGAGCTGCCAAGAACTTAGTTTTGGTGGGGGAGGTAAAACTGGGAAATGCTGCTCACTGACAGAATTAAAAAATAACCAGTATGAAAGTCTTTGCGCCATGAATCTCTACTGTAGCCATGAATTTCTGGAAGGTTGGATACTTACCAAATGAAAAAAAAAAAAAAAAGAAGGGAGGGTGGGGGAGCCAGATGTACTAAGTTTGTGGAAGAGTCTTGTCCCTGCTTCAGTGATGGGAAGGCTGTCTTCTGGGCTACAGCCTGAGGAAGTGTGTCGTTTCTGAAACTCAGCCCCTTACCTGGGAGGGGTGTGTTTTTAGCATCCCTACATTTCAAGGAACTGTTAACAACCATCATCCCAGGAAGAAAACAGCTTGCCTTTGGGTTCCCATTTTGTGACCGCATTCGACAAGGAGCTTGGGTGGCCTCATCTGGTCTCTCCTGGAGTGTGTCCTCATAGAAGTTGTGTATTCCTTGCGTGCTGAGCAGGGGCTTTGGAACATTTCATGATGCTGAATTCTAGCAGGACAAATCTTTTCTGTAAGTAGGCCTGAGCTTTATTTATCAATGAAATCCAAGGAGAAAATGAGGTTAATGAAGAGGTAGTGAATACTGCAGTCCACCAAATTAGTTTTTGGGTTTTTTGGAAACTCTGGAATACTTCAGGGTTTTGTTTTGTGGTGGGCCACCCCCCTCTTTTTTCGTCTTCCAGAAGCAAAAGCTATGATACAGTTTCTCTTAAAGTTTAGATTTTTTTTTTTTACTCAGCTCAAATATTAATTTTTTATATAATCTCTCTGCATGACCTGTGAATCTGAATCCACCAGCTCCTTTTCATGCCGCTTTCCTACAAGCCTTTATAAACGTTCTTCTGTCAGCATTTATTTTGTGGGTCCGCAGCCTTAAGTGGTGTGTCCCCCCTTCCCCCCCCAACGCCAACCCCCGTCTGGGAAGGGACCAGGTGGGCGTCACAGGGGCATCTGTGGACTCAGTCTGTGAACCATGTCGATCGATCGTCATGGCCTCTTCTGCAGGCTTCCCCTTTCTCTTGGAATGGAATTAAACCCAGTTCTGAAATGGTGTTGACAGAGTCAAAAGCTTCTGATGGTTTTTTCCTTCTGGTTTTCGTTTGTTTTTATGAAACAACAAAAACGAAACCAGAGTGCAAGACCAGAGCTGCTTCTGTCTTCAGTACCGACTCACCAACAGGATGGTAACAAAGCACAAACAGACGTCTCAAGGGGGAGTGCTGATTGGCCGATCAAGGGGGAGTGCTGATTGGCCGAGAGTTCTGCGATAAGGCGGGAAACACTTGTAGAAACTGCCTCTTGCCCTGTCCCCACTCCAGGTGGTGGGGGATGGGGGAGACAAGTTTTGCCCCCAGAGTTTAATCCTAACTGGTGTCTACCAGAATGTCACCTACCCCGGGGAGCAGATCTTAGTCTGTGGGAAAACCGCAGGCATGTTTCACAGTGATGACACATTTGCCCACACAGAATTGGGCAGCCAGCTAGCATAGCATGTGGAAACTTAGCAAGCTTTTCCATTTGTGGCTCCACGTTGCATTGCTGTGGCTGATGAACGTGTCCGTCTGCTCAGAGAAAGGACAAAAATTCTTTGAAAATCTAGTCTCCAGAGTTAAGGTGTGTATGACTCTGCATGTGTGTTTTTGTGTCTCAGTGTAGTTAAGAGATGTTCATTCCGTATTGTGGCTGTGAGATGATTTTATTTCATTTCTGTCCCCACCACTGTTGTCATTCCATATTGATTGTCATTCCAACCTGGAGAAGACTTGAGCCCTCTGGTTGGCACTCTTGTTTGTTACCTCATTCATTCTCCAGTGAATTCCACCTGACCAGCTGATTCAGAATCAGGCACGCTTCCCACCCTTTGGCACATCCAGTAAAAGGCCAAACAGCAAGTCTGAGTTCTAAATTTTAATTAATCACTCCCTTTTTTTTTTTTTTTTTTTTTTACACTTGAGAGTGGTTGTAATAAAGGCTGTCATTAATAAACTTGGTTCTACCTTACATCAAGTTCTATCTGTCTTCATTCTTTCTTGTGGTTGTGAAATTCTCTAATCCGGTGGTGATCAGACGTTAGCATGCATTGGAATCTCCTGGAAAGCTTGTTAGCACACAGATTAGTGGGTTTGCCACATCCCCAGAATTTCTCATTTAGTGGGTCTTGGGTGGAGCTTGAGAATGTGCATTTTTGACAAGTTTCCAGGTGAACTGTTGCTCCGTGTCTGGGAAAGATACTTGTCAAGGCACCCCTCTGACCAGGTTCTCTCAGAGGGAAAAGAGAGAGAGGGAACATTTTGTGTCTGGGGAAGGAAAGGTCCTTTGTGCTGCTGGACGCAGACTAATGAGAGATGGGGCAGAACTGAGGATGTAGGAAATCTGTCTCCGAAATCACTGTCTGTGATCACCATCACCTGGGGACCATGCAGAATACAGATCAGGCTTTGCCCCTAGCAATCCTGGAGTGGGAGTCGGAGCTTATATTTTTTTTAAGAAACTCCCATGCAATTTTAACACACAATAAGATTTAGAACCCATAGACTTAGGTAAATCTTAATAACATTCACAAGCTTTTTATGGGAAAATAATTTCTAGCAGTCCCTTAGAGCAGGATTCTTAAAAACCCACCTGAGTTTTTAAGATTAAAATACCAGTGTATTGATAAATGTCCTTTCATTGTGAACTATCTCTGCAGAAGGCTTCTGTCTTGCAAACTACTAAAGACTTTTTTCAAAGACAATAAAAATTGAAGGTTCATACAGTATTCTCAGACCATGACATTGTGTTCCCGTACTTGTTTGAGAAACAGTGTAGCTCACTTGTCTGGATATTTGAGACAATGTTATTTTGTTATTATGGCTATAAGGAAATTTATCAGGGGTAACTGGAGATAACCAATTCACATTTGTTGAGTTTTCTTAGCTGTGCTGTAGAGATTATGTGTACATGTGAGGTAATTGGACCTCTTTGTTCAGAACAAACTCTGGGCCAACAAAGGAGAAATGTCACAGCTCAGAAGTAAAAAAAAGATGCTTTGTCTACAAAGCTTAGAACTTACAGGAAGTTTCTTCCAAGTTTGGCAGATAGACGTTGGAGGATGATTATTGGATTTGTCTTTATCTCTCTCGTTTAACCAGTTGCCCACAAATAGCATTCCCTTCTGTGATTTACAAATATACAGTTTTTTTTAATGAATGCAGGAATTCAAAAGTAGACTTTCATGTCATGAAGCACTTGAAAAAAAAGTGCCTTTCCTTGTTCTTTCTCCTTTTTTTTTTCCTCACAAAGAATAAGCCTCTCCTTCTCTTTCAGCTTTCTTCCTGCTCCAGGTCCCTGCCACCCTTTTCTCAAGGGGATGCTGAAAAGTGTTGCTTGGCTTTTTCTTCTTATGCAGCCCGCTTCCTCCTCTGGGCCCTGTGCGTGTTGGTTGGCGGGGGTTGGGGTAGGGGGAGAGCAGGCAGGGATGCACTAATTCTACAGTTTCCTGTTTCTGGCGGGCTTGGACCGTCGCCCTGGGAAGCTGGTGGGCTAAACAATGAGAACCCCGGGCCCAGGGACTTCCCCAGCTCTTTTGTCATTTATTCCACAAAGCCCTCCTCCTCTAGGGAGATCCTGCGGAGACCTCCAAGGAAGGACTGGGAACCCCTCCATAAACACTGGCCAACAGGGTTGGTGGCCAGCTCTCTCCAGGGAGGCCAGGGGGCTGTTTCTTTGTGATGCCTTCTCAGGAGGAGGAAGCCTAAGCTTTGAATGAGAAGGAAAATGCAGTGTTTGGAAATACTCTATCTTGGCCTTATTGTGGTGACATGATAAAG EMBV3_42361 GAAGCCAGCTTCAAAATGTATACCCCAAGATTTGTACTTAAAAGGGCCTGACCAGGTATA Gene GeneID:513678|CHEK1:NM_001098023:20_cdna Constitutive 0 NULL GeneID:513678 29 GENE CHEK1 NULL CHK1 checkpoint homolog (S. pombe) EMBV3_10599 GGCTAGAGCTTCTGTATTTTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCC Gene GeneID:783763|LHX2:XM_002691581:109_cdna Constitutive 0 NULL GeneID:783763 11 GENE LHX2 NULL LIM homeobox 2 EMBV3_05048 TTGATAGGGAGTCTAGGGGTCCCCAAAGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAAA Gene BVV0101_061722 + 1 EMBV3_12148 GK000008.2:6473917-6642814 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00166913 TCONS_00253739 TCONS_00036105 TCONS_00238581 TCONS_00129710 TCONS_00118490 TCONS_00011700 TCONS_00012285 TCONS_00059696 TCONS_00250599 TCONS_00040981 TCONS_00165977 TCONS_00219592 TCONS_00125637 TCONS_00118456 TCONS_00040258 TCONS_00111186 TCONS_00145751 TCONS_00250203 TCONS_00031886 TCONS_00133817 TCONS_00233473 TCONS_00234240 TCONS_00246739 TCONS_00087729 TCONS_00174808 TCONS_00211020 TCONS_00196823 TCONS_00118491 TCONS_00174807 TCONS_00115210 TCONS_00251851 TCONS_00251720 TCONS_00132067 TCONS_00250681 TCONS_00145750 TCONS_00072261 TCONS_00055707 TCONS_00174805 TCONS_00023655 TCONS_00204211 TCONS_00171428 TCONS_00207933 TCONS_00174806 TCONS_00188145 TCONS_00031972 TCONS_00059695 TCONS_00161822 TCONS_00238985 TCONS_00188520 TCONS_00118487 TCONS_00232824 TCONS_00089291 TCONS_00002600 TCONS_00036106 TCONS_00199364 TCONS_00207485 TCONS_00229794 TCONS_00031759 TCONS_00099018 TCONS_00209974 TCONS_00000529 TCONS_00206299 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00251625 TCONS_00246740 TCONS_00061493 TCONS_00220566 TCONS_00118459 TCONS_00118040 TCONS_00056144 TCONS_00210913 TCONS_00204210 TCONS_00019195 TCONS_00010963 TCONS_00252081 TCONS_00124524 TCONS_00216950 TCONS_00166910 TCONS_00241019 TCONS_00110425 TCONS_00123823 TCONS_00001867 TCONS_00174809 TCONS_00242064 TCONS_00162767 TCONS_00125353 TCONS_00018601 TCONS_00132066 TCONS_00080713 TCONS_00022895 TCONS_00107436 TCONS_00118488 TCONS_00198905 TCONS_00078426 TCONS_00087730 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00206300 TCONS_00010280 TCONS_00205125 TCONS_00004603 TCONS_00061496 TCONS_00061492 TCONS_00228562 TCONS_00056149 TCONS_00221350 TCONS_00125692 TCONS_00118489 TCONS_00168038 TCONS_00175330 TCONS_00173458 TCONS_00001866 TCONS_00061495 TCONS_00006385 TCONS_00218901 TCONS_00009619 TCONS_00007850 TCONS_00001865 98 XLOC_105290 XLOC_072622 XLOC_101749 XLOC_156678 XLOC_021081 XLOC_145248 XLOC_078423 XLOC_072644 XLOC_007251 XLOC_007831 XLOC_036486 XLOC_153542 XLOC_024793 XLOC_100817 XLOC_132911 XLOC_077179 XLOC_024074 XLOC_067086 XLOC_088920 XLOC_153146 XLOC_018131 XLOC_081223 XLOC_142955 XLOC_143719 XLOC_151107 XLOC_052579 XLOC_104695 XLOC_129530 XLOC_118488 XLOC_069472 XLOC_154792 XLOC_154661 XLOC_080699 XLOC_153624 XLOC_044030 XLOC_033515 XLOC_014322 XLOC_124371 XLOC_103815 XLOC_126448 XLOC_114188 XLOC_018217 XLOC_098707 XLOC_145651 XLOC_114563 XLOC_142307 XLOC_054076 XLOC_000643 XLOC_121017 XLOC_126001 XLOC_139288 XLOC_018004 XLOC_059261 XLOC_128485 XLOC_000141 XLOC_124877 XLOC_120473 XLOC_103679 XLOC_154566 XLOC_036985 XLOC_133883 XLOC_072206 XLOC_033947 XLOC_129423 XLOC_009875 XLOC_006514 XLOC_155022 XLOC_076070 XLOC_131385 XLOC_101746 XLOC_147683 XLOC_066329 XLOC_075375 XLOC_000454 XLOC_148728 XLOC_099648 XLOC_076895 XLOC_009288 XLOC_049597 XLOC_013565 XLOC_063346 XLOC_120558 XLOC_047314 XLOC_148229 XLOC_005831 XLOC_124587 XLOC_001070 XLOC_138526 XLOC_033952 XLOC_134666 XLOC_077234 XLOC_102874 XLOC_105112 XLOC_104361 XLOC_001948 XLOC_132220 XLOC_005172 XLOC_003410 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_00075 TGCTTGACAAAGACCAGCGAGAACGGCGCGGTCTCCAGCATCAATTCACGCTTTGCCAAA Variant GeneID:506018|EXOSC1:NM_001015529:84_cdna 154^228 2 EMBV3_42592 GeneID:506018 26 GENE EXOSC1 NULL exosome component 1 EMBV3_14430 GACAGAGCAAAGTGCTTTGAAAAGAATGAGGTAGATGACAAAGTGAACTTCCATTTTATT Variant GeneID:514394|UCHL1:NM_001046172:26_cdna 547^594 2 EMBV3_09611 GeneID:514394 6 GENE UCHL1 MGC133697 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) EMBV3_27998 ACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGAATCTGGTGGAGTGGGCAATGGAC Gene GeneID:541122|LOC541122:XM_002690079:2_cdna Constitutive 0 NULL GeneID:541122 9 GENE LOC541122 NULL similar to Temporarily Assigned Gene name family member (tag-278) EMBV3_09672 CTCAACCAGATCTTCGAGGAGGGGGAGTCGGACGACGAGTTCGACATGGACGAGAACCTG Gene GeneID:536909|SNRK:XM_002696930:476_cdna Constitutive 2 NULL GeneID:536909 22 GENE SNRK NULL SNF related kinase EMBV3_03606 CGATCGCTGGATCTTACACTCACCAACATCAGCTCTTCAACTGAGGACACGGATCTCGAG Gene GeneID:618048|CAPN7:XM_002685176:34_cdna Constitutive 0 NULL GeneID:618048 1 GENE CAPN7 NULL calpain 7 EMBV3_32152 TGCAAGTAACAAAAGTCTCTGCACCATACCTGTCTTGTTAGCCTCTTGGTCCACGGCCTT Gene BVV0102_010986 - 1 EMBV3_29932 GK000010.2:11157047-11332414 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019267 1 XLOC_009947 NonCoding TCONS_00019267 XLOC_009947 NonCoding NonCoding - 10:11271033-11274317 - TSS13157 3284 2 TCONS_00019267_5 92 0.427527405602923 1 0 1.89888683141871e-06 0 2.34825222543902e-07 0 1.50340344381202e-06 1.61487438620484e-06 0 2.1449098300423e-06 6.2495511744187e-06 1.80224169189755e-06 3.94394211324038e-06 3.13943069964945e-06 2.28379547691073e-06 7.82617064042856e-05 7.8636960881279e-06 0.000560004029377749 0.00012946884589306 0.000322013682139746 0 7.38905955063181e-06 0 0.00026733188407458 0.000551473563369876 0.000350153930208745 1.05488412117615e-06 1.78782704691345e-06 2.5487900192e-07 1.68909958180705e-05 2.2444317954877e-05 5.428381446646e-06 XR_227695.1 LOC101908400 PREDICTED: Bos taurus uncharacterized LOC101908400 (LOC101908400), 0.0 1121 73.44 0.520401948842874 NM_001007253.3 ERV3-1 Homo sapiens endogenous retrovirus group 3, member 1 (ERV3-1), 6e-10 71.6 73.73 0.0356272838002436 0 noncoding 1 0 1 1 0.00699599191683453 0.974485310766707 0.00219601864676713 0.965106292746534 GATAAATCTTTTCAGGTTATACTGTATGGTTGATGTTACTAATATAGATATCCTAGAATTATGTGAAATTCATATACATCTGATATGCCCTGATACTGTATTAAACTGTTATGACCAGGTTTCTTTGTCAATTGCAATAGAATCAGATTTTAAACATGCTTCTATGGTTTTACTCTCAGGCCTTTAGAAGAATACTGCTAGTTCTTCAAGATTTTTGGAAAAGACTTTCTAACATTAAGCAGATAAACAAATTTTGTTATTAACAGTAAGCTGGTACCAGAGTGGAATTTGGTCTTTTCTCTGTTTAGAGAACAAAGTTTTCTTAGAATGCAGCTTTTGATAACAGATTATGAATTTCTTTGTCTTTAAGTGATTTATATTTGTTTTTAAAATGTTTTTGTTACTTTGGTAAAGTAAATAAACATTATTTAAGATTGCGGGACATGTAGACAAAGCTCATTCTGCTTCTACAAAAAATAACTCCTCAAGGTTAGACTTTTGCTATCCAGATAGCCTTAAAACATGGCAATAGTCTGCTCCTAAATCAGGAAATTAAAAATGGATGAACAACAGCTGAAAATCAAAAAGCCAGGGCTATAGGAAATCCAGGATGGCCACTTGGCTTTTCCCGGCTCCCTGACAGACCTTATTTTTATTTGATGGGTTAAAGACTTCCCTGGCTACAGTGTTAATGCCCTCAGAATGAGTTCTAAAAAAAAAAAAAAGAAAGAAAAAATTATGTTTCACTGAATATTAACTTCTAGTTTTGTTAATTAAGGTCTGTGCTTACTAACTTTCACTTCTGAAATAGTTCCTTGTTATGTTACGTCGCTAAAAGATTTAATTAAGTTATTAAAAAGGACACTCTAAGATTGTTTCTAAAGCTTGTCTCAGTAACCAGTCTTTGGATAAAGGTCAGATGCTCCATGCTCCATACACCAGGAGATAAACACTTGGCTATTATCATTTAACTGAGTCGGATGACCTGGGGTATACCAGGCTATACCCAGTGAAAGTTCTTGACTTGAATTCTTGCTTGTGACCTTACTAATAACAGCTAGCTATATTATTTTCTATGTAGCTTGTTTCAGAAGATTATTTCTTACATTACCAAATGTGTGACTGAGCCTGTGATAAAATGCTGATATGTAGTTCCATATGAGATCAATAACGGTAATAATGTAGCTCTAGATATGAGAAGCAGCAGCAAGAGGAAAGGCCGTGGACCAAGAGGCTAACAAGACAGGTATGGTGCAGAGACTTTTGTTACTTGCAAGGCCTGGCCTAGTGACAACACACTGAGTGACCTGTCAGTGGAATTTTTGTTAGACCTGGGAATGAGCCTTCCCAGCACCGCGGGTCACAGTGACCATGAAAGGCCCCCAAACATGGTCAAATATGTGGCTATGAAGGGGCCCTGTTGATTGAAAGTTGGCCCTTGCTGGCTGCCTCTACAAAGATTGAATCATGACCACTACAAGATGCTGACCTTCAACACCCCCTTTGAAAGGAGTTCAGGATAGAGACAAAAAATAAGGCACTCTGTGCTCTGGGAAAAAAAGAAAACACACACACATACACAAACAGGCCTTCAGATAGTCAGATGTTTTCAGGTAAAGATTTTTATGAGTCCAAATTCTTGCATCTTCTCATACCTAGAGAAACACTAATGTCATGAATCAGTGTCTGGACCTGGTTCTCCTGGCTAGCCCCTCAGCAGCTTTCCTAAGTCTATTGATCTTTGGACCATATATCTTTAACTTTCTTGTTAAGTTTGTTTCTCCAAGTAGTAGTACAACAAGAATATCCCCCGGCCAACACCCAGACAATGCTAGAACAAGCTGCCTTATCATTCTGTGGACTCTCATCTCCCTCTGTAAATGCACCCCGAGGTCCTCAGGCTAGTCTCCCTTTGAGGTCTTATATGGGAAATCACCCCCAGTGATAGAAAAGCTCAAGGGAGACCACCAGCAACTAGCTGACCTGGAGATGTCCCGAAACCTCCAGGCCCTGGAGAAGTTTTCTGCCATATAGCCCGAGAAACCTTAGAAAGGACACCCATTTATTTGGGCAATTGGGTTCATCCCTATCAGCCAGGAGATGAGGTATAGGTTAAAGATTGGAAGAAGGAACCACTTAAGCCAGTTTGGACAGGCCCTCACACGGTCGTCCTGGCAACCCCTACTGCTGATAAAGTTACAGGCGTCATCCCTTGGATCCACCGCACCAGAGTCAAGAAGGCAGCGGCTTCCTGTGATGAAGACACCTGGAAAACAGTTCAGGACCCCAAAAAACTCCCCAAGGTCCAGTTCCAAAGACAACAGCCCTCACCCACAAAGGATGCTGATCTCTGCTGTAGCCACTCCAGAAGCTGACTAGTCAGTGCACAGCAGAAGCTTGAGGATTCTTCAGCCTTGCTCCAGCCACACTCCGGCAGCTGGCTGGTCAACACATGGAGGAAGCTTGAGGACCTGGCTATCAAGATATTGATGGATTTTCATTGTCAACCCTGGCCTGTATCCCTACTCAGTATTATTGCTGTGCTCTTTGTTACAGGACCAACTAGACTCCCTGGCTTTACAGAACTGTAAGACTCTGGTTTTACAGAATAGGAGAGGGCTAGACCTACTGACCAGAGAAAGCAATGGCACCCCACTCTGCCGGGGTCCAGCCCCGGTGGATCCAGGGAATTCGAAGCGGGGACGGCGTCGGCGAGGATCAGGAAACAACTGCTTAATTAAACTTTAATTAAGGATATAAAGAGTAATAGAATAAGGATAGCTCAGTGAGTAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTAAGAGAAAGAACGACATGGTGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAGTAGTTTTTATACCTTAAGTTATGCATAGAGGATAATGGGGGAAGGGGTAGAGTCATGAAGCAAGCCAGGCTTTCTTCCTGCAAATTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGGCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAGAAAACTTATTTTTCTCTAAAGGTGATAAGTCAAGCTCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGACACAGCAGGTAAGGGATATGGAAACTTAGCAG TCONS_00015955 TCONS_00015956 . 3' 22470 TCONS_00015955 TCONS_00015956 . 3' 25753 EMBV3_12460 CCACTCTTACTAACACCTGACGGTACGATGCCCTGTGCGGGTTAGTCAGGATGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_30225 TGTCTCCAGGGGCTTGATTGTCATCCTGGTACTACTGGTGTTCGTCCTTCTGTTTGTTGG Gene GeneID:516046|CD1D:XR_082689:38_cdna Constitutive 0 NULL GeneID:516046 3 GENE CD1D CD1D1 CD1D antigen, d polypeptide EMBV3_41777 TGCAGACAACTTGCACAGGGGGATTTTCTCTCCACATTGGCCTGGTTTGTTTGCCGCAAT Gene GeneID:360006|DNAJA2:NM_001040491:75_cdna Constitutive 0 NULL GeneID:360006 18 GENE DNAJA2 MGC137854 DnaJ (Hsp40) homolog, subfamily A, member 2 EMBV3_35874 GACTAATCCAACACCTGACAAAATAATCTCTTGCCTGGGAATCTAGCCTAAGAGGATGTA Gene BVT0102_284498 - 1 EMBV3_29999 GK000006.2:92378161-92450669 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205791 TCONS_00205792 TCONS_00205787 TCONS_00205788 TCONS_00205789 TCONS_00205790 1 XLOC_124748 Coding TCONS_00205788 XLOC_124748 Coding Coding PPEF2 6:92446929-92462665 j TSS153585 4723 1 TCONS_00205788_1 304 0.678805843743383 7 0.700285986653956 5.00739295361278e-07 0.000749793809156533 0.000314398726860471 1.30471918014188e-11 0.000106882904311912 0.000157119099111424 0.000698503021223847 2.06752567202561e-20 0.0002250789431269 7.67946016915153e-06 4.03784367920476e-05 4.83621283966244e-13 6.89782024664782e-10 5.68443932474045e-09 1.00759274127492e-08 9.54043107308181e-13 0.000147590585684629 3.61143920037151e-99 0.00012963713158407 0.00106969132103545 1.03368881562512e-19 0 1.08791939948258e-06 1.18566742181164e-05 0.000478225077374628 9.87511333753637e-10 1.10401747768557e-07 0 0 1.38569984972313e-06 XM_005208093.1 PPEF2 PREDICTED: Bos taurus protein phosphatase, EF-hand calcium binding domain 2 (PPEF2), transcript variant X1, mRNA. 0.0 2219 100.00 0.260215964429388 NM_006239.2 PPEF2 Homo sapiens protein phosphatase, EF-hand calcium binding domain 2 (PPEF2), mRNA. 0.0 1263 85.74 0.229938598348507 TCONS_00205788_1 sp|O14830|PPE2_HUMAN PPE2_HUMAN Serine/threonine-protein phosphatase with EF-hands 2; 0.0 564 86.51 0.996710526315789 5 coding 0 0 0 0 5.94323909225425e-06 0.999959220478815 0.00121497065550384 0.979798559163862 GTAAGCTTGGTTTAGTGACTCAGCATCACTGTGGGGAGAAGGTGGTGGATATACTGTGGAGTGACCCCATGGCTCAGGAGGGCTGCAGGGCCAACACCGTTCGAGGAGGCGGCTGTTATTTTGGGCCTAATGTGACAGAGCGGTTACTACAGAAGTACCACCTGCAGTTCCTGATCCGCTCACACGAGTGCAAACCTGAAGGCTATGAATTCTGCCACAGTCGCAAGGTGTTAACCATCTTTTCTGCCTCCAACTACTACGAAGTTGGCAGCAACAGAGGAGCCTATGTCAAACTGGGGCCAGAACTGACCCCACACATCATGCAGTTTCAAGCTAACAAGGCAACCCACATGCTTACCATGAGGCAAAGGATTAGCAGAGTGGAGGAGTCAGCTCTGAGAGCCCTACGGGAGAAGTTATTTGCCCATTCCTCAGATATTCTTGTTGAATTTAAGAAGCATGATAAAGATGAAACTGGTCTAATCGCCCTGAGCGACTGGGCTGCAGCCGTGGAGTCCGTGCTGCACCTGGGGCTGCCCTGGCGGATGCTGAGGCCACAGCTGGTGAGCAGCTTGACGGATAACAAGCTGGCGTACAAGTCCTGGCTGGAGAACTTGGCCAAAGAAAAACTGAGCCAACAGAACATACAGTCAAGTTTGCTGGAAACACTGTATCGCAACCGATCCAACCTGGAGACCATTTTTAGGATCATAGACAGTGATCACTCAGGGTCCATCTCACTGGACGAGTTCAGGCATACTTGGAAGCTATTCAGCTCTCATATGAACATTGACATCACAGACGACTGCATCTGTGACCTTGCCCGGAGCATTGACTTCAACAAGGATGGCCACATTGACATCAATGAATTCCTGGAGGCCTTCCGCCTTGTGGAGCAATCCTGCTCAGGGGGTGATGTCTCAGATTGCCCACAAGTCACAAACAGTAGTAACAGGGACTGCAGCAGCCCAGGTGCACACTAAGGCCAGCTTTGTCCCCATCATCCAAGGTGCCTCAGAAGCAATGCCGAGCTCGTTGCTGGAATGTCTTTCTTATTCTCCATAAATTCATGGAACTTTATGCTGAGAATTTGCCTACCAATATGCAACAGAATCACCTGTGTATTCAAGCGAATTCTACCAAAGAACTTTTACCAATCTTTCTCAAACTTTTCCAAAAGACTGAAGAGGGAACCCTCCTAAAGATCATTCTATGAAACCACCATCACCCTGATACCAAAATCAGACAGATATCACCAAAAAAGAAAATTACAGGCCAATATCTTTGATAAATATAGATATTTGTATTTATAATGCAAAAATTTTCAACAAAATATTATCAAACTGAATGCAACAACACACAAAAATGATCATACACCATGACCAAGTAGGATTCATCCCAAGTTCACAAGGATGGTTCAACATAAGCAAAATCAATGGGAAACACCACATCAACAAAAGAAAAGACAAAACCCACATGATCATCTCAAAAGATGCAGGAAAAGCATTTCACAATTCAGTATCCACTCATGATAAAAATTGGGTTGGGGAACATATTTCAACATAATAAAAGCCATTTATGACAAACCCACAGCCAATGTAATACTCAACAGTGAAAAGCTGAACACCTTCCCGCTAAAACCTGGAATAAGACAAGGGTACCCACTCACCACTTCTATTGAACATCATATTGGAAGTCCGAGCAACAGCAATCAGACAATAAAAAGAAATAAATGGTATTCAAATTTATTTATTTATAAATTTATTTATTTATTGGAAGGGGAGAGGTAAAATTGTCATTATATGCAGACAACATGATACTATATAGAGAAAACCCTAAAGATTCCACACAAATACTAGAACTGATAAATGAATCTGGCGAGGTAGCAGGATACAAGATTAACATACAGAAATCAGTTGCATTTTATACTAACAGTGAAATATCAGAAAGGGAATGTAAGAAAAAATAATACCTTTAAAATTTGCACCAAAAACCCCCAAAATTCTTAGGAATAAACCTAACCAAGGCAGTGAAAGATTTATATGCTGAGAACTATAAAACATTAATAAAGAAAATTAAAGCTGATTCAAAGAAATGGAAAGATATCTCATGCTCTTGGACTGTAAGAATTAATAGTGTTAAAATGGCAATACTGCCCAAAGCAATCTACAGATTTAATGTGATCCCTATCAAATTACCCATGACATTTTTCATAGGACTAGAACAAATAATCCTAAAAATTTATATGGAACCATAAAAGACCCAGAATTGCTAAAGCAATCCTAAAGGAAAAGAACAAAGCAAGAGATGTAATTCTCCCAGACTCCAGACAATACTACAGAGCTACCATAATCAAAACAGTGTGGAGTTGGCACAAAAACAGACACACAGATCAATGGAACAGAATAGAGACCAGAAACAAACCCGCACCATCAATAGAGGAGCAAGAATATAAAATGGGAAAAAGACAATCTCTTCAATAAGTGGTGATGGGAAAGTTGGAGAATTGCATGTAAATCAATGAAGTTTGAACACACCCTCACACTAAGCACAAAAATAAACTCAAAATACCTTAAAGACTTAAACCTAAGAAATGACACCATAAAACTCCTAGAAGCAATCATAGGCATTCTCCAACATAAATTGTACCAGTGTTTTCTTAGATCAGTCTCTCAAGGCAACAGAAATAAAAATGAAAATAAACAAATGGGACCTAATCAAACTTACAAGCTTTTGTACAGCAAAGGAAACCATAAACAAAATGAAAAGACACCGTATAAAATGGGAGGAAAATCTGCAAATGATATGACCCACAAAGGTTTACTTTCCAAAATATACGAACTCATAAAACTCAACAACAAAAAAACAAACCCAATCAAAAATGGGCAGAAGACCTAAACAGACACTTTTCCAACGAAGACATACAGAAGGCCAATAGGCACCTGAAAAAATGCTCAACATGGCTAACTGTTGGAGAAATGCAAATCAAAACTATAAAAGGTACCCCCTCACACCTATCAGAATGACCATCATTAAAAAGTCTACAAATAAATGCTAGAGAGTGTGTAGAGAAAAGGAACCCTCCTCCACTGTTGGTGGGAATGTAAGTTGGTGCAGCCACTATGGAAAACAGTATGGAAGTTCCTCAGTAAGCTAAAAATAGAATTACCGTATGATCCAGCAATCCTACTCCTGGGCATATATCCAGACAAAACTATAATTCAGAAAGATACATGCACCCCTATGTTCACAGGAGCCCTATTTACAATAGACAACACATGGAAACAAAGTAAATGCCCACCAACAGACGAATCGAGAGAGAAGATGCAGGGTGTATGCACAGTGGAATACGACACCCATCAAGTCCACTCCCAGTGGAATACTACAGTCATAAAAAAGAACAAAAGAATGCCATTTGCAGCAACATGGTGGACCTAGAGATGATCACACTAAGTAAATAAGTCAGAAAGAGAAAGACAAATACCATGTGCTATCACTTATATGTAGAATCTAAATGAACCTAAAGACCGAAGTAGACTCACAGATATAGAGAACAGACTTGTTGTGAAGGTGGGTAGACGGGGGAGTGATGGACTGGGAATTTGGAGTTAGTAGATGCAAACTATGACATAGAGAATGGATACACAACAAGGTCCTACTGTATAGCACAGGGAATTATATTCAATATCCTGTAATAAACCATAAGGGAAAAGAATAGTGAAAAGAATGTATGTATACAACCGAGCAGAAATGAACACAACATTGTAACTCAACTCTGCTTCAATTGAAAAAAGTATCACCTGTGTATTGGGTATGGAGGATGAGATTATTTTTAATAGGTCCCCAGCCCCATCTCAGAATTTTTATAAGGTAGCACCCAGGTGTTAAGTATTCTGAAATTCTGAGGTCTATCCTAGTTAAGAACTACTTATAATTCAACCCCTTCATTGTTTTCATTGTATACCTTTTATTTATTGTTTTTATAATGTCTTATTGGTAAAGGTATAAGAAATTGTATAATCCATGACCAAAACATATGTATCCTTTTCCTTATTTACTTTTTCTTGTTATAACTATAATGTTTATGTAACTTAATGTTCTGCTTGTTTTATAAATTCACATCTGTGTTGCTACATAGTCTTCATGATTATTTATTAATGGCTGCATAATTTCACATAGATGTAATTAATCTATTTAGCTATTCTCCAATTGTTAAACATGTATTTCCAGGTTTTCATTATTATAAATAACACTGGTTCAAAACTTTATGCAATGGCTTGTTTCATAAAAATCGTTCAAATTATACATCCTCTTAGGCTAGATTCCCAGGCAAGAGATTATTTTGTCAGGTGTTGGATTAGTCTATAAGAAGGTTTACTGTAGGGCTCACATGATTATGGAAGCCAAGAAGTCCCAAAATCTTCAGTCAGCAAGCTGGAGACTTCAGAGTTGATGGTGTGGTTCCACGTTGGTTCCAAAACATGGTTTTCAGCTGATGGGTACAAAAAGCCAGGACCTTCCCTCATACAAGGAAATAAATTTTGCGAACAACCTGACTTAACTTGGAAGCAGATTCTTCCAGAGGTAGTTGAACCTCCTGGTGAGAAGTCAGCCTGGTTAACACCTTGACTGCAGACTTGTAAGACCCTGAGCTGAGGACCCAGTAAAGCTGTGCCTGAATTCTTGACCCAAAGAAACTTTGAGATAATAAACGTGTGTGGTT EMBV3_39035 GGCTAGTGTTAGGAACGCCATGATCTTCATTCTGTTCATCTGAGCTCCAAAGGGTGGGAC Gene BVT0102_177823 + 1 EMBV3_13745 GK000011.2:38511200-38706387 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41985 TCCCTACACTTTGAATTCTTTTTAACTTAATTTTCTACACTGCTATTAGCATTATCTCAG Gene GeneID:281625|ANXA4:NM_001001440:5_cdna Constitutive 2 NULL GeneID:281625 11 GENE ANXA4 NULL annexin A4 EMBV3_33608 AGCTGTGAGGTGGGAAGCAAGGAAGCCGCAGCTAATGATGACTCCGAAGACCTGAAGTGT Gene GeneID:617443|MGC152353:NM_001102311:312_cdna Constitutive 0 NULL GeneID:617443 21 GENE MGC152353 NULL hypothetical LOC617443 EMBV3_23477 GTTGCCCTGCCAACCATGTTCAGCCACATGCCTACCAATTCACCTACCGTGTGACAGAAT Gene GeneID:767997|PLAC1:NM_001077057:23_cdna Constitutive 0 NULL GeneID:767997 X GENE PLAC1 MGC133839 placenta-specific 1 EMBV3_25969 GGAGGTAAGCAATTCACTAGTTGGGGGAAAACTCGGCAATGCCAAGAGCACAGTAAAACA Gene BVT0102_311684 + 0 NULL GK000009.2:18973264-19000359 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13578 CACCCGGGAGTTCTGAGTGTTTGTGAGAGAATCAAGGCGTTAAATTTGGGCAACGAGACG Gene BVV0102_025669 + 0 NULL GK000019.2:46261712-46431523 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094106 TCONS_00094103 TCONS_00094104 1 XLOC_057360 Coding TCONS_00094104 XLOC_057360 Coding Coding ARF4 19:46246900-46263348 j TSS70465 2332 1 TCONS_00094104_1 221 0.0591766723842196 5 0.858515230741169 0.00432599103426802 0.0047052218819121 0.00759117713642526 0.00471281293286327 0.00532666649128712 0.000273865438547225 0.00276198357039108 0.00283806501868169 0.00494016302416756 0.00352498074317236 0.00113186122932207 7.64175005701691e-09 0.000762910120318382 0.00277829777279733 0.00115201488162848 0.0763060060645414 0.0058341699942854 0.0261485899313243 0.00893155998721862 0.00555384124025166 0.00236657541450266 0.0153973068077072 0.0110979841702773 0.0219257307630801 0.00598063099345195 0.00464349844016603 0.00388485053654133 0.00742975949356476 0.00396633266525652 0.00914747532240152 XM_005220815.1 ARF4 PREDICTED: Bos taurus ADP-ribosylation factor 4 (ARF4), transcript 0.0 3947 100.00 0.937821612349914 NM_007477.4 Arf2 Mus musculus ADP-ribosylation factor 2 (Arf2), mRNA. 0.0 973 87.69 0.33704974271012 TCONS_00094104_1 sp|P84081|ARF2_BOVIN ARF2_BOVIN ADP-ribosylation factor 2; 3e-132 374 100.00 0.81447963800905 7 coding 1 1 1 1 0.214520412432468 0.471256292827972 -0.00775691283343544 0.870993987865725 CCATTGACAGATGAATAGATAAAGAAGCTATGGTACATGTATACAATGGAATATCACTCAGCCATAAAAGTGAACGAAATTGGGTCATTTCTAGTGATATGGATGGACCTGGAGTGTTATACAGAGTGATGTCACAGAATTCAGTAACAATGGGGAACGTTTTTGAAAAATTGTTTAAAAGTCTCTTTGGGAAAAAGGAGATGCGGATTCTTATGGTGGGTTTGGATGCCGCTGGAAAAACCACCATCTTGTACAAACTGAAGCTGGGAGAGATTGTGACTACCATCCCCACGATAGGTTTCAACGTGGAGACAGTAGAATATAAAAACATCAGCTTCACAGTCTGGGATGTCGGCGGCCAGGACAAAATCAGACCTCTGTGGCGACATTATTTCCAGAACACACAAGGTCTGATTTTCGTGGTCGACAGTAATGACAGAGAGCGGGTCAATGAAGCCCGAGAAGAACTAACCAGAATGTTAGCTGAAGACGAGCTCAGAGATGCGGTCTTATTGGTGTTTGTAAATAAACAGGATCTTCCCAATGCTATGAACGCAGCAGAGATAACAGACAAGCTTGGCTTACATTCCCTCCGCCAGAGAAACTGGTACATTCAGGCTACTTGCGCCACCAGTGGAGATGGGCTTTATGAAGGCCTGGACTGGCTCTCCAACCAGCTCAAAAACCAGAAGTGACGGGAGGTGCTGCGCTCCCCTGCGTCGTGGCAAAGTCAGCTGGCCTCTTGTGTGTGCGTGTGTGCGTGTGAGGAGCCGAGTGTGGGTGTGTGGCGGGCGTGGGAGCAGCTTTCTCACATAGTGCCTTATACACGCTCTAAAGAAACCAGTCTTACATGTTAAGAACAACCAGTGTTACATTTTCTACACTACCTTCCATTTCAGTAGCTTTGATGACCAGTTTTGCAGTTCATGGGGGAATCCATGGGGGCGTCCCAAGGGCTCCCCCATGCCCGAGAGCCGGACTGGTCTTTGTGACGGGAAAGTTGGGGGAGGGTGGGCTGTGGACTGCCTTCACTTGTGTGATCTTGGCTCAAGCCTGGGGTCTCTGCACACCTGGGGATCCTGTTAGACTCTGGCATCCTTTTGTTAAAAAAAAAAAAGGCGGCTCAAATTAAAAAGGCCCTTGCTTACCACAGATACAAAGTTCAGATCTGAACTTATTTTCTAGCCCAGAGGTCTTGGTTTAATGTACGTTACTGAGAGAAATCAGTGATCTTATTCTATGAGAAGGAAAAAAAAAACCCGTAACACTAGACCCTGTAACACTAGAAAATCATTGAATCCTTCCTTTGACTCTTATTTGCCAAATGGAGACCCTCTGGTGTGGGCACCCAGCGCGTGGCAAGGCTCTTTGCCAGGGATGCCCCGCCACGCCCCAGGCTGGGTTAAGGAGGGGCGATGCCTTCGTGTTCCTCGTCACCTCTCTGAGGCTGCTGCCCAGACTCCTCTGCTCTGCACCGAATGTTCTCCGCCTGAAGCAGGAGCTTGGCTCCCCAGATGGAAGCAGAACCATGTACAGTATGTCAGTCCAACTTGCAGTTTGGGTTAGCTGCTCTTCGTAGAACCACACACCCGGGAGTTCTGAGTGTTTGTGAGAGAATCAAGGCGTTAAATTTGGGCAACGAGACGCCCGGCAGCCAAGTTGGTTGGTGCTAAATTTTGCCATGAAGGATGTCTCATCCAGGCCACTCTCCGTGGCACTGGGACTCCCTCTTCTGGTTGGCAATCATGGAATTTTCCATGCCATGGAATCATGGCAAACGTGGAAACGTGCTCTATGTTATCCTCAAAATAGAGGTAACAACGGCCCGGAAACGAGCTGGGTTTGCTCAGTAGTCTAGAGCTGTTTTGTCCAGACAGCTGTTGTCCAAATTTGTACCTAAGCTCTTCCACTACTACCTTTTAAAGTTGCTTTTTCAAAAAAAAAAAAAACTCTTCGTTTTAAATTACAGAGGAGGAGAGTGTAAAATGAATTTTAACAAAAGTAAACCTTGTTGATAACCACCAAGTTGCTATGACTCGGAAGAAATGTCATGATGTGATCAATGTGAGTGTAATGTTTTTCCTTAAGACATTGACTTTAAAGAATGTTCCTTGCAGTACTGGCAACAAAGTCCAGATTTGATTTTTTAAACCATGCAATTAAGTCCTGAGAAATATTTAGATTGTGCGCCTCGAATTGGCAGGGAGTGTGTCTTACACTTTTGTATTTATGCTTAGTGCGTGTGCCCGGTACCGTGCTGGGCCTCATCAAATACTTGTTGATTGGTTGGACAATAAAGACTTGCTTTGGAAGGAGGAGAGGACAGCCATGT EMBV3_10939 CCCACCATGCCCACTGATGCTTCAGCAATATAGCAATATCTAATCTCCTAAAGATCTTCA Gene BVV0102_109877 - 0 NULL GK000016.2:57039139-57209959 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03928 TCTATCGCCGTGGGGTTCTTCTGTGAGACCGAGGATGACTTTAACGACTGGTGTCAGCAA Gene GeneID:408002|ATG4B:NM_001001170:8_cdna Constitutive 0 NULL GeneID:408002 3 GENE ATG4B Aut2b2 ATG4 autophagy related 4 homolog B (S. cerevisiae) EMBV3_19599 TCATCCTTCCGTGTAGAACAAGCCTAATCTCTGCAGGTATGTTTATGAATTTCCTTTCAG Gene BVV0102_255497 + 0 NULL GK000010.2:81375403-81380459 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014962 TCONS_00014963 TCONS_00014960 1 XLOC_008395 Coding TCONS_00014960 XLOC_008395 Coding Coding EXD2 10:81323207-81378579 j TSS10675 5164 1 TCONS_00014960_1 628 0.126452362509682 9 0.906900724205812 4.06971021486907e-05 3.68321500075627e-09 1.47168590708137e-08 1.29456401081121e-08 2.83957381084757e-05 2.02460691975118e-11 5.13277563174549e-05 4.29814347182684e-12 1.04866546485176e-08 6.50032911972436e-09 3.51262473738084e-09 1.3701161766366e-11 1.38959448806171e-08 8.14270438819144e-11 2.33878731724039e-12 0.00133098349609753 2.48638958682213e-08 3.88037788767374e-08 5.98718128860733e-05 0.000248873114606569 1.26094027449089e-11 0.000411511494873972 5.63235053471715e-05 7.40694856171763e-05 4.49704624852694e-05 1.12923216008002e-08 8.96324133313241e-09 7.72304520635639e-11 0.000112345983910527 7.73107940426725e-05 XM_002690983.2 EXD2 PREDICTED: Bos taurus exonuclease 3'-5' domain containing 2 (EXD2), 0.0 5865 100.00 0.629550735863672 NM_001193361.1 EXD2 Homo sapiens exonuclease 3'-5' domain containing 2 (EXD2), 0.0 3187 81.35 0.646398140975988 TCONS_00014960_1 sp|Q9NVH0|EXD2_HUMAN EXD2_HUMAN Exonuclease 3'-5' domain-containing protein 2; 0.0 1152 89.79 0.995222929936306 1 coding 0 0 0 0 -0.0358700671952771 0.73222928921167 0.0311913840398038 0.529606249785272 CAGATATTCAGCGTGGGGTGCCGCAGGTGTTCGGGTCGGGTCCAGGGCCGCAGATTGCGGGGTTAGTGATATGCTTTCCTAAACAGCAGGAAAGTTGAAGATGTCTAAACACTTAGTGGCCTTGACAGTGACCACCCTTCTTGGTGTGGCTGTCGGAGGGTTTGTCCTGTGGAAGGGCTTCCAGCGCCGGAGGAGTAAATCGAGCCCGGTGACCCGGCGGCGGCTGTCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGTGCCAGGCGGGAGAGAGCTGCCCGCTCCAGGAGAGGACCAGCCGCACTCCATTGCCCCCAGAGCCTCATGGGAAGAGAGGATCCTCGGAGCAAAGGTGATGACTGTGTCTCAGGAGGCGGAGTGGGATCAAATTGAGCCCTCACTTAGGAGTGAGATAGAAGATTTTCCAGTGCTTGGAATTGACTGTGAGTGGGTGAATTCCGAAGGCAAAGCCAGTCCTTTGTCACTCCTTCAGATGGCCTCTCCAAGTGGCTTCTGTGTCTTGGTTCGCTTGCCCAAGCTGATCTGTGGAGGAAAAACACTACCAAAAACATTATTGGACATTTTGGCAGACGGCACAATTTTAAAAGTCGGAGTAGGGTGTTCAGAAGACGCCAGCAAGCTTCTGCAGGATTATGGCCTCGTCGTGAAGGGATGCCTGGACCTCCGCTACCTGGCCATGAGGCAGAGAAACAATTTGCTCTCTAATGGGCTTAGCCTGAAATCACTCTCTGAGACTGTTTTGAACTTTCCTCTTGACAAGTCCCTTCTGCTTCGCTGCAGCAACTGGGATGCTGAGAATCTTACTGAGGACCAGGTAATTTATGCTGCCAGGGATGCCCAGATTTCAGTGGCTCTCTTTCTCCATCTTCTTGGATACCCTTTCTCTAGGAATTCGACTCTAGAAGAAAACGATGACCACATTGTCTGGAGAAAAATCTTAGAGAAATGTCAGGATGTGGTAGATATCCCATTCCGAAGTAAAGGGCTTAGCCGATCAGGAGAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAGAAGACAAGAAATAAGAAGTCGAAAGCTGATGGAATGATGCCAGGCAACCAGCAAGGGAGAGACCCCAGAAAACATAAAAGAAAGCCCCTGGGAGTGGGCTATTCTGCCAGAAAATCACCTCTGTACGATAACTGCTTTCTCCACGCTCCAGATGGACAGCCCCTCTGCACTTGTGATCGAAGAAAAGCTCAGTGGTACCTGGACAAAGGCATCGGAGAGCTGGTGAGCGAAGAACCTTTTGTGGTCAAGCTGCAGTTTGAACCTGCGGGCAGACCAGAATCCCCGGGAGACTACTACTTGATGGTTAAAGAGAATCTGTGTGTGGTGTGTGGCAAGAAAGACTCGTACATTCGGAAGAACGTGATCCCGCACGAGTACCGGAAGCACTTCCCCATCGAGATGAAGGACCATAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGCCACGCCATCTCCAACTACTACGACATCCACCTGAAGCAGCAGCTGGCCAGGGAGTTCCAGGCCCCCATTGGCTCCGAGGAGGGCTTGCGCCTGCTGGAGGATCCTGAGCGCCGGCAGGTGCGTTCGGGGGCCAGGGCCCTGCTCAACGCCGAGAGCCTGCCTGCGCACCGGAAGGAGGAGCTGCTGCAGGGGCTGCGAGAGTTTTACCGCACAGACAGGGTCACGGAGGAGATGCTTCAGGAGGCAGCCAGCCTGGAGACCAGGATTTCCAATGAAAACTACATTCCTCACGGGCTGAAGGTGGTGCAGCGCCACACTCAGGGCGGGCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTGGCGGCAGCACTTCCTGGACTCCATGCAGCCCCGGCACCTGCCCCAGCAGTGGTCGGTGGACCACAACCATCAGAAGCTGCTCCGGAAATACGGGGAGGACCTTCCCATCAAGCTGTCGTGATCGCCGCCTCCCTTCCGGGTTAGGACGCCTGGGAAGCTGGAGCCGGGGGGTGCCAAGTCACCTCTTCCTGTTTTAATGTCATTGTCAGATTCTGGTGACACACTCACAATACTAACCCGTCGTGATCATCCCAGGATGCTTCTGGTGGAGCAAGGCTGTTGCTTTCAGGGGTGCTCCTGGTTTTGAATTTCAGCTGGGCAGAGTGAGAATTCTCTATTCCACCCTTTTCTGGACAAACGGGAACCTTGGCCTTCATATTTTTCCCCTCTCCCTATAATGCTTTCCCTGTACAGGCGACACATGAAGGATTCTTCCTGAAGTGTCTTGTCAAGACTCTCAAGTTTTTAATATTTTTTTCTTCCCTGTCCAGCATGTTGGTTTATCTCAAACAGGAGCTGTCAAGTATTTCAATCCCATCTGGTTAGGAGGGAGAAAAAAATAAAACGTTCTTCTAGAGGTTGGAGAGGTAGAAGGGGGTTGGATTCATACTCCCAGCTCAGCCTCATGATTAGAAGTTCTTTGGCTTGATGCTGTGCTGGAGCTCACCTGGATGGGGATCTGGCCCAGCTGGGCTGCTTGGGTTTAATACACATCCTTGAAAATGCTCCCCTTTACTTGTTCAGGGCCAAGGCAGCAGCTTCCTGCCACGTGTTTTCACCCTAGCCCTGGAGGGGATTCTTTTTGGAAAGAGGCCTGGGTGGGCCACAGAGAAGCACGAGCACCACCTCCCTAGAGAACTTGGATGATTTGCTCAGCTTTTGGCTGTTTGTTGCAATCCTGCCCAGAACGTCAGGGTTTTTAGCGTAATCCCTTTCTGAGAGGAAGATTATCTTTTCTCAGAATCAGTATCTGGTCCCTTCAGTGTTCTGTGTTCTATCAGATTTGCAATACTGACCTCTTTTAAGCTCTTTAATTCTCTCCCAGAGCCATTTGGTCAGGTTGCAGTGAGAGGATTTCTCCATCTCCCATCTTGCCTGGGACACTGGGATTAATTAATCCGTTTTGATGTTCAAAACGGTGGTGTTTCTCATCTTTCTAAATGTGAGGCCACCACTTTGAGCATGAAATCAACTTATTAGTGATTAGGATCTTTTTTTAAAGTATAAGGAAAACTTTCTTACCTTACAAGATTTTAACAAGCTTTAAAAAAATTTTTTATGGCCATAATTCAACAGGAACTCTGTTTTGGAGCTGTGCCTGAGTTGGTGATGGCTGCTCTAACATTGATAAGTAAAACAACTTCTAAGCACAAAGTTCATGAATTGTAAATGTAAAACTTTTTGCTTTATAACTTTGTAAAATCAGTGAATACTCTTGGGGAAGGAGATCTTTATCCTATAGGTCCCTGCTGTGTGGCAGCCCATGGTGTGTCCTAAGTCACTTAAGTCGTGTCCGACTCTGTGAGACCCTATGGACTGTATAGCCTGCCGGGTACCTCTGACCGTGGGATTCTCCAAGCAAGAATGCTAGAGTGAGTTGCCATTCCTTTCTCCAGGGGATCTTCCCCACCCAGGAATCGAACCCACATCTCTTATGTCTAACTTGCATTGGCATGCAGGTTCTTTACCACTAGCGCCACGTGGGAAGCCCATGGTATGTATGCACAGACTCCCCTATCCCATCCCACCCCACCCCACCCCGCCTCCCACCCCCACCCCTAGCTTTGACCCCTGGACAGCAGCCCACCACACATGCACATCTTGCATTTTTTTCCTCTTCCCTTCCCACTCGTCCTCAAATAGGTGTTTTTGGGGTCTAAATCAAAAACTCTTGAAAACAAATAGTACCAGCTGCTTTGGGGGCCCTGTGTTCAGCACACTAGGTTGTTATGGGGCTGTCACTTCACTGGAGCCCGCGGCAGAGGACCAAACTGATGGGTGGTCGTCGTAGTAGTCAAGCTTGCCACAAGGGGGCGCCTGTAGCTCTTGCTTTATAAGCATTCTTGAGAAATAAGTGGCTTTTATACCCGAACCTTGGACATAACTCACGACTTATGTTTCAGATTGTGTATATCTGGTTTTGAGTCATTTTGATAAGTTTTATAAGAAAAACCTCTTTCTCTTAAGAGAGTAGGGCACTCCCTTTCTCTTTCCCTGTATCCTCACACTTAGAGGTGAGAATCATGTCCTAAGAGGTCGTTTAAGGAGCTGTGGTTGCTGAGGGTAGAAGGAATGGGTTCTCCAGTAGAACTCCCTGCAGAGCTTAATATCACAGAGCCAGCAGCCAAGACAGAGGAAAAATCTGGACTATGGCACACGCAATCTCTGTCCTTTTTAGAACACACGCTGTTTAGATTTGAATCTTTTCGTGTTTTTAAATCAGCCTTGGACTTTAGCAGCCTGTCCCTAAGACTGACAATAGCTATCTCAAATGAGTCATTTTAGGGTAGGCATATTTTTAAATAATTTTTTCTTCTGATATAAAAGTCATGTGTATGCTTGTTAGAGATGAATCTAAAGAAAGAATGAAAATCCATCATCCCTCCGTGTAGAACAAACCTAATCTCTGCAGGTATGTTTATGAATTTCCTTTCAGTATTTAAAAATGCATATATTGTGTGTAGTATTTAAACAGGCTTGAGAGTCATATATATAGCTTAGTATCCTATTTTTCCTTCATTTAACCTGGTATCATAAGTAATTTCTTGTCTCTTTAAATCTTTGAAAGTAGATTTCCAGTAACTCTACCTTACTTTATTATCCATGCCCACACTGTTGAAATTTTTGGTTGCTTTGGATCCTTTGCTAATATCAATGATGTATGCAATGAACTTTTTTGTGTGTAAATCTTTGACTATAACTTGGCTAACTTATTTAGGTTAGAACCTTAGAAATTGGATTGCAAGGAGGGGGAGGCATGTTGCTGGAGTGAGTACAAATTGATATCCATTTTTAGGGGTTTCTGTGATGGGAATGTTTGCCTTTGACCCTTTCCCTCACGCCCTAGGGCATTCGCTGAGTTTCCTTCTCTGTGAGCAGCAGTGAGCAGACAGTGTCACAGCAAAGGCCCCTCTGATGTGCCTGAACATTACGATTGCAGCCTCAGAGTCTTTTTTCTGCTTCCCTTCTGCTCCCATCCTTCCTTGCCTCATTCCTCCTTGCAGCAGTGATTTTTGGAAATACTGTTTGTTTTAAAAGAAAATTGTAAAAAATATTAATTAAAAATAAAAAATTTTAT EMBV3_13264 TCTCTGTGGTACATGAAGTTTCTCTGTGGTATAGGGCTGAGGCTGGTAGAAGAGGTGAGG Gene GeneID:508445|HCLS1:NM_001035057:47_cdna UTR3_Alt 2 NULL GeneID:508445 1 GENE HCLS1 MGC127454 hematopoietic cell-specific Lyn substrate 1 EMBV3_37978 AGCTGCAGGCTGGGAAGTGTCAACGAGAACCTCTCAGTGTTGCTGATGGCCAAGAAGTTT Gene GeneID:615106|ENOSF1:NM_001046550:182_cdna Constitutive 0 NULL GeneID:615106 24 GENE ENOSF1 MGC137490 enolase superfamily member 1 EMBV3_30434 AAAAAATACCACAACCCACCAAAAATAGATGCCTCCCCGCCCCCATAACCAAGCTGGTGC Gene GeneID:282367|SLC6A8:NM_174611:22_cdna Constitutive 0 NULL GeneID:282367 X GENE SLC6A8 NULL solute carrier family 6 (neurotransmitter transporter, creatine), member 8 EMBV3_24436 CTTCTACATGGAAGGCCCCCTTGATTGCTCCTCTCTACCCTTGGAGTTGGTCTTAATCCA Gene BVT0102_004659 + 0 NULL GK000002.2:127295156-127299733 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106698 TCONS_00106701 TCONS_00106702 TCONS_00106700 TCONS_00106697 TCONS_00106699 TCONS_00106703 1 XLOC_062872 Coding TCONS_00106697 XLOC_062872 Coding Coding LIN28A 2:127296552-127309875 j TSS78477 2732 2 TCONS_00106697_5 131 4 0.795225942050743 0.00253179876858197 0.0017301957992363 0.000917822802778908 0.000776605929055388 0.00249976067538079 1.70066434046633e-08 0.00196396693955037 0.00141867772392232 0.00422130535732835 0.000590098388474324 0.000173741944996112 5.15569228603263e-05 4.3414738018078e-07 0.000847149390730711 0.000345358928342194 0.00854288205409586 0.00399848493251445 0.00958428917040643 0.000346757631555169 0.000195548722172826 8.11519465248218e-05 0.00442311006019023 0.00429000514125766 0.00553366788163818 0.000691888438625229 0.000562504806708308 0.00106914198633739 0.000468580729459985 0.000631679359709056 0.00120739042480893 XM_005203243.1 LIN28A PREDICTED: Bos taurus lin-28 homolog A (C. elegans) (LIN28A), 0.0 895 100.00 0.181185944363104 XR_241203.1 LIN28A PREDICTED: Homo sapiens lin-28 homolog A (C. elegans) (LIN28A), 0.0 865 74.83 0.476573938506589 TCONS_00106697_1 sp|Q8K3Y3|LN28A_MOUSE LN28A_MOUSE Protein lin-28 homolog A; 4e-62 191 100.00 0.927835051546392 1 coding 0 0 0 0 0.00817631029119808 0.947789865221696 -0.0363340752796533 0.68044763318232 GAAACGGCTTCGGGACCCAACGGCGGAAAGCCGAGAATTCTGCCGGGCCCTCTCACCCAGAGTAAGCTGCACATGGAGGGCTTCCGGAGCCTGAAGGAGGGGGAGGCCGTGGAGTTCACCTTTAAGAAGTCCGCCAAAGGCCTGGAATCTATCCGAGTCACCGGCCCTGGGGGGGTGTTCTGTATTGGGAGTGAAAGGCGGCCCAAAGGGAAGAATATGCAGAAACGCAGATCAAAGGGAGACAGGTGCTACAACTGTGGAGGTCTAGACCATCATGCCAAGGAGTGCAAACTGCCACCGCAGCCCAAGAAGTGCCATTTCTGCCAGAGCATCAACCATATGGTACGTGAGCAATCTCAGGGATAAGTCAGCAGCAGCTCCGGGTCTGCACAGCAGGAATGCTTTTTGTTGCTGTATCATCAGAGAGAACAACTATTTGGAGTGTATAGCCTATTGAACTACCTCATTTTTGCCAATTACAGCTGGCTGTTCTGCCATGGTGTCCTCCTGAAATCCCTCCATCTTCAGCGTTTCATGAGAGACTAGGTTTTAACTGGGTTGCCCCATGACTTGGTCTCCTTCCTACTGAAAGATTGGAAATTGGTCTGAACAGGAAAACGTGGTGCAGAGTGGTTAGGAGAGGCTGGGCCAGGTAAGAAGTGTGAGAGGGGAAGCCAAGATTAGGCAAAGGTCGTCTGTATGTGTGGCAAAGGATTCCTGTTCCAGATCTATAATCCTAGGGCACAGGACTCGCTTTATATACCAGATCCATCCTCCACCTGACTGGGCTAGGCCGACCCTGCACAACAGGGTGTGTGTGTTTTTATAAGAAATGGAAGTTGTTAAGGAGAGGTTTTTAAGAACAATCTGTACCTATCTTGAGCTGCCCAGGGATGGATATGTGAAGCAAGGACAAGATCTTTAACGATGCTGGGCTTTTCCTTCTTAGCTTCTGGAGAGACCATCAGCAATGGCTTCTTTGTGGTTCCCAGAGCCAGGGTCCTACTCTGCTGCAGCAGTGATTAGTATCATGGCAGCTAAAGGAGAAAGGGCGGTGGGGGTGGCGGGTTCGTTTACAAGCTGTGAGATCACTGCAGACCTACCTCACTGTGTTGTCACGGGGCAAATGCAATAGAACGCATTGGGTGATGTGTGTCTGATCCTTGTCTCCCCCAGCTGCTGCCCCCCTCTAGTTATTATATTTGTCTGGGCTTTGTAGGACTTCACAAGTAGCTGATTTGGTGATTGCTAGGTGGCCTAGTTTGTGTAAATATAATGTGTTGGTCTTCTCCATGTTCTTTTGGGGTTTTATTGTTTACAAACTTCTTTTTATATTGAGAAAAATAGCCAAAGCATCTTTGACAAAATGTTCTGCACCAGGCAAAGAAATCTGAAACGTAAGCTTGGGGGCCCCTCTTGAAGTTGGGGGGGTCTTGAACTACACTTTCTTTTGTGTTCCCCTTCCTCTATTTCCTATTTCAAAGAAGATCTGTCCTGAAAACTAGATTCCTATTCCCTCTTCTTTCCACCTTTGTGCCCCCCCGAAATAGACCATATACCTATACATTTAATTTGTGATCTGTCATTAAGTGATTTGTGCAGAAATCCTGAAAAGGCTAAGATTGCTCCATCCCTTGTTCCCAATTTCGAGTCCTGTCCATTCCTTGATGTGATTCATGCTAAACGGACTGATGTATTTGGTTGGATTAAGACCAACTCCAAGGGTAGAGAGGAGCAATCAAGGGGGCCTTCCATGTAGAAGGTGGGGCTGGGAGACCACGAAAGGAAAGATGAATGTATATCCAAGTCACTCAGGAACTTTCATGCAGGTGCAAGAAACTTATGTCAAAGTAGCCACAAGATTGTTTAATAGCAGACGGACGAATGTAACTCCATGTTTACTGCTAGAAACCAAAGCTTTGTATGAAATCTTGAATTTAATGGGGAGGGAGGGAGGGAGGGTAGAAAAGCATGTACCCATCTGTTCTTTTCCTCATCCCTTCTCATTCCTGAACTGCAGGAGACATAGCCCCTTGGGCTTTGGCGACCCCATCTGGGCAGTGTTTATTTGATGGCTGATTTTGCTGTGCCAGGTACTTCCTTTCCCATTTGCTATCATTTTGTAACACACACGCTGACCCTTTTCCCTTTCCTTTGTTTTCCTTGGGAATATACAATGAATAAAAACTTATTGGTACTGAAACTGTCATCTTGGTTGATACTTAAGGCGCCTTCCTCCGACTGTTATTTCCACCTTCTTGGATTGGGACTCAGAAGTCATGAGAAGAACCATTAAGTTTTTGGTTCAGCCATTTTCTTAGGAGTGAATCTTGAAAGTTCAGTCTTTTTAGCACCTCATTACAGTGGATTTGTGTTTCTAGTTAGGGCCTCTTGTCCTTTCCTTGGAAGCTGCCACATTCAAAGGGGATTAAGGGCTTGGCATGCATAAGAATGGGGTTGCCTGTGCCACTGGCTGGGATGAAAGGATGGGGCCATGGCTTGGGGCATGAGACCCTAATAATACTTTGTCCCTTGCTCCTCAAAGCCCTTTACAAATCTTAATTAATTAACCCCCTGTAGCAACCCAGGGAGGGAAATACTGGAAACTGGGGAAAGTGAGGCCAGAGGAGATAACACTGACTAGTTACAAACACATGTTAACAAGTTCGCTAGCCTTCTATTTCTTAACATCTAGCTTCCCCCATAAAAAGAGTTTATTTGATTGGAAGCAT EMBV3_15558 CCATACACACACCTTCACTTCTGGCAGTCTTCTGCCTCCTCTATCATCTGAAACATCAGC Gene GeneID:509744|ADH1C:XM_002688126:40_cdna Constitutive 0 NULL GeneID:509744 6 GENE ADH1C NULL alcohol dehydrogenase 1C (class I), gamma polypeptide EMBV3_09492 AAGAGCACCCAAGTTATTGGAGAAGGCTCCTGCCTCATCAACCTCTGGCCACACTTGGTT Gene BVV0102_326923 - 0 NULL GK000007.2:32058002-32114444 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29291 GTATATGACCACAGGCTGGAAGGGGACTTTGCCCAGCATGTATTTGACGTGACTCAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21191 TGGGAAAAACTACAAGCCACCATATGCACAGACTACACAGTGAGTTGGCTCAGTGCTCCC Gene GeneID:538649|FAM60A:NM_001076116:20_cdna UTR3_Alt 2 NULL GeneID:538649 5 GENE FAM60A NULL family with sequence similarity 60, member A EMBV3_31858 GTGGGGTTTCTATTGTGTTTCGTTACTTGCTTGGTCTTCGTCCTCGGGGCCCTCAGACAT Gene GeneID:613904|VGLL4:NM_001099128:152_cdna Constitutive 0 NULL GeneID:613904 22 GENE VGLL4 MGC166232 vestigial like 4 (Drosophila) EMBV3_23990 CCCTCAGACTTTCCTCTGTTCTCTGATGCCCCTGTGCTAAACCTGCACTTGACTATTTCC Gene GeneID:505800|LOC505800:XM_002697939:616_cdna Constitutive 0 NULL GeneID:505800 25 GENE LOC505800 NULL similar to Interleukin-32 precursor (IL-32) (Natural killer cells protein 4) (Tumor necrosis factor alpha-inducing factor) EMBV3_31134 TATAGCAGAGAAGATTGAGGGGTACTCTGGTGCTGATATAACTAACGTTTGCAGGGATGC Gene GeneID:781432|KATNAL1:XM_002691812:470_cdna Constitutive 0 NULL GeneID:781432 12 GENE KATNAL1 NULL katanin p60 subunit A-like 1 EMBV3_07385 TGTGCTCTTCTTCCCACAAGGCATGATTCTCACCATGGCCGCGCTGATGCTCTTCTTCAT Gene GeneID:788530|LOC788530:XM_002699339:204_cdna Constitutive 0 NULL GeneID:788530 29 GENE LOC788530 NULL similar to rCG48429 EMBV3_15765 TACTGCTCGACGTGCTGTGCGTGCTGGTCGGTCCGGTACATCTCCGACTTCTTCAAAGCT Variant GeneID:504545|PPAP2C:NM_001045890:23_cdna 117^778 2 EMBV3_30383 GeneID:504545 7 GENE PPAP2C MGC138011 phosphatidic acid phosphatase type 2C EMBV3_12398 TTCCTACTGTATTTGTGGCAGTGGCAGGCAGAAGCAATGGTTTAGGACCGGTGTTGTCTG Gene GeneID:404170|PAICS:NM_205813:83_cdna Constitutive 0 NULL GeneID:404170 6 GENE PAICS MGC138031 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase EMBV3_07292 GAAAGATCCTTGGCCAAAGCCTCTCCCACTGACCAAGACCACACATGGTTTCAGGCCCTG Gene BVT0102_167113 + 0 NULL GK000005.2:109391118-109404788 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11613 GCTGGTAGGGGAGAAATAGCAAATGGGGCTTGGAGGGGTAGAGATGGGTAGATGGTAGAA Gene GeneID:514541|RAB13:NM_001024540:141_cdna Constitutive 0 NULL GeneID:514541 3 GENE RAB13 MGC134259 RAB13, member RAS oncogene family EMBV3_04400 CCTGTCATAGGAACGCCAACTAAAACCTTTCTCTTGTTGCTTTGGAGAGGCCCAGGACTT Gene BVT0102_059894 + 0 NULL GK000011.2:1958762-1985891 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029611 1 XLOC_015870 NonCoding TCONS_00029611 XLOC_015870 NonCoding NonCoding - 11:1976026-1976792 - TSS20610 766 2 TCONS_00029611_2 81 0.178851174934726 1 0 0.00031971674054717 0 0 0 0 0 7.61319557045497e-06 0 0 0 0 0 0 0 0 3.44799094622678e-05 0 0 0 0 0 9.68756536352618e-06 0 0.000350174977630594 0 0 0.000573677291854348 0 0 0 0 noncoding 0 0 0 0 -0.0389630031090947 0.814677801078852 0.0195037638434084 0.678761381083919 TAGACCAAACTTTCAGGTTACAAAACAGATGAAAAGGAGTCCTTGTGATGTCCCAATGTTGGGAAGAGGGGAGCTGGGCGTGGCCCCAGCAGTTGGGCTCCAAGCACTTGGTCAAGTCCTGGGCCTCTCCAAAGCAACAAGAGAAAGGTTTTAGTTGGCGTTCCTATGACAGGACTTGCCTTTTCATCCCTTCTAAACGCTGGGGTGGCCTCCCCACTTCAATGCTTGTCAAGGTTTGTGCTTCCTGTGGGCTTGCCAACAGGATTTTCAGTGTCTGCTTCAAAGAGGAATAAAGTGGTGTGTCTCTTTAGAAGCCTTGTCTATGGAGAAACAGCAGCGAGAAAATTGATTCTCTCTTGTGATCACAGAGCACACCTCTACCCTGCTCCCTTCCCTCCACGCCCTGTATAGTCAGGGAACAGAGTTGCAGAAATATTCCTCCACATACCTGAGCTTCCGGCTCTCAGCACAGTGGCAGGTACACCACGGGCACTCAGCGAAGGTTGGTGGACTGAAAGGGCTTTTGAATTCTTGGCAAAACACACCTGAAATTATTTTTAGCTCTCTAATTCTAGCTTGCCTCATTATGTGGGATGTCCTGTTCTCTGTTGGACTAATTGGGTTTGAAAGATGCACTTTTCTCCTGGGACGACTTCAAGTCACATTCGGGACTTACGGTTTTAGATTTTAGAAGCACAGCTTTGTCCAGGGTTTCTGTTAAGGACTCTAAATTCTAGCTCTTTGTTTCAGCTTTTTACACACACAC TCONS_00023712 TCONS_00023713 TCONS_00023714 TCONS_00023715 TCONS_00023717 . 3' 2340 TCONS_00023712 TCONS_00023713 TCONS_00023714 TCONS_00023715 TCONS_00023717 . 3' 3105 EMBV3_08041 AATGTGACCCACAAGTTGTGGAAGAAATACATAACATATTTGCCATAAAATCTTGGGCCA Variant GeneID:618239|MND1:NM_001038223:28_cdna 553^597 1 EMBV3_43587 GeneID:618239 17 GENE MND1 MGC134110 meiotic nuclear divisions 1 homolog (S. cerevisiae) EMBV3_43349 CTCCAGGTCTCACTCTGGCTGGGAAGGTTTAGGGATGTATTTTCTCTTACGTGTTCACCC Gene BVT0102_249881 - 1 EMBV3_25394 GK000005.2:110363543-110365979 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34401 AACAAACCCAGCATAAGGCCACTGGGCACCATCTTCTCAACAAGGACCATCAGCCAGGAA Gene GeneID:508031|TMEM216:NM_001166563:58_cdna Constitutive 0 NULL GeneID:508031 29 GENE TMEM216 MGC133901 transmembrane protein 216 EMBV3_08946 GTGTTCAAGTGCTTGCTGGAGAGTGTGATAAACAGTGGCATTTTCTCCTCAAGTTGTCCG Gene BVV0102_419945 + 1 EMBV3_12626 GK000030.2:102926408-103538140 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06356 AGCTCCTCAGCGTCATGCCCATCCCAGAAGACCGACACCACGGCACACCCATGCTGCTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16223 AGGCTACGGATGTGGCTCTGGTTTCGGAAGCTACGGATGTGGCTCTGGTTTCGGAAGCTT Gene GeneID:100296223|LOC100296223:XM_002684605:65_cdna Constitutive 0 NULL GeneID:100296223 1 GENE LOC100296223 NULL hypothetical protein LOC100296223 EMBV3_42390 TCTCCCTGGTGGCCGGCCTGCTCCTAGCCTCGCATCGCCTACCTCCGCCAGCGCCCTGGC Variant GeneID:505354|LOC505354:XM_002691635:330_cdna 641^696 3 EMBV3_34671 GeneID:505354 11 GENE LOC505354 NULL similar to zinc finger, DHHC domain containing 12 EMBV3_22528 CCAACGCACTGGTGATTGGTGCTACTGTCATGGAGGGCTTCTACGTGGTCTTTGACAGAG Gene GeneID:534774|BACE2:XM_002685112:21_cdna Constitutive 0 NULL GeneID:534774 1 GENE BACE2 NULL beta-site APP-cleaving enzyme 2 EMBV3_21720 GCATGCTGAAGACTCCCAAGTTACCTGTCTGGCTGTGCAACATCAACGGAAATTACAGTG Gene GeneID:100300829|LOC100300829:XM_002685004:126_cdna Constitutive 0 NULL GeneID:100300829 1 GENE LOC100300829 NULL similar to CG7332 EMBV3_43217 AACCTGCTCAGACCCTGCGTGCTTATTAGGGAGATATTCCAAGTCGTCCTGCAGCAAGTG Gene BVV0102_031236 - 1 EMBV3_28692 GK000019.2:51155594-51207150 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100693 1 XLOC_060935 NonCoding TCONS_00100693 XLOC_060935 NonCoding NonCoding - 19:51174802-51175421 - TSS75069 619 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000187748079808675 0.000405345889410103 0 0 0 0 0.000133386749104236 0.000433333341357212 0 0 0 0.000248275516291265 0 0 0 noncoding 0 0 0 0 -0.0106845658663766 0.917154221578757 0.0069762800863853 0.884406374726598 CGGCCGACCGAGGTCTGTTTCGTGGAAGTGAGTTCTTGCGTTGGCCACGATCCGGCGGGACGCTGGGGGATCTGGAGAGTTGCGGAGACGCGAGAGGCGCCAGCTTGGACTACGCGGCACTTGCTGCAGGACGACTTGGAATATCTCCCTAATAAGCACGCAGGGTCTGAGCAGGTTCCTTGGCGTGGTGATCCTGACGTCCTGAGTCACCAGTCCCGAGAAAGCCCGGCCCAGGGGACCCGCCCAGAGACCGGCGATACGGACATCAGGCCTCTCTCGCAGTCCCACCGCCTCTTGGCCCCCTCAACGTGACAAGGACGCGCCCCTGGAAGGAGCACAGGGGCTCGGGATTAAATACCGGACGTTTATTGACAGCCAATACACTTACTGTAAAGTTCACTTATTTAAAGTGTGCGCTTTTGAACCAGCTTCCTTTCCTTAATCAGTTTCTAGAATTTGCATTTCTCTAGTTATGCTGCAAGGCTTGTCTGTGAGGGTTGAGGGTGTTAAGATATAGTGCAGTTGTGGTTTGAGAAAGTGTGAGAACACTCAGTCTCCTGAAAAATGTCTAGGCTTTTGGTAGCTGTAACAATATTATCAATAATAAATAAGTAAAGCG TCONS_00094334 . 3' 19210 TCONS_00094334 . 3' 19828 EMBV3_40838 TGGAAAGTTGGAATTCGCCTTTAAGGCTTACCTACTCACCAGCCCACAGAGAACGTTGTC Gene GeneID:282023|PTGS2:NM_174445:16_cdna UTR3_Alt 2 NULL GeneID:282023 16 GENE PTGS2 NULL prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) EMBV3_17820 TGGGCAGGGAAGTAGCCTGAAGCAGATTGGCACTGGAGATGTAGAATTAGGCGCAGAACA Gene GeneID:515018|ISLR:NM_001080729:88_cdna Constitutive 0 NULL GeneID:515018 21 GENE ISLR NULL immunoglobulin superfamily containing leucine-rich repeat EMBV3_22071 ATGCCCGCATGGAGGAATATGAGAGAAACCTGGCGGAAATGGTGGCGCAGCTGAGGAACA Gene GeneID:504992|IL17B:XM_002689286:113_cdna Constitutive 0 NULL GeneID:504992 7 GENE IL17B NULL interleukin 17B EMBV3_03988 CGGAGGCCTCAAAAAGTGTAAAATCTCCAGGTGTGACTGCACAGAAAAGTTACAGAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18008 CCAGGGGCTCTGAGGACAGTAGCAGTGAGAAGAAAACTGGAATTGGTTGCTTTGGAATGC Gene GeneID:512971|POLR2E:NM_001038093:50_cdna Constitutive 2 NULL GeneID:512971 7 GENE POLR2E MGC134612 polymerase (RNA) II (DNA directed) polypeptide E, 25kDa EMBV3_10865 CCTCGAGTCCCTCGACATCCCCTTCACCAAGGCCAAGCGTAAGAAAAGCAAAAGCAGCTT Gene GeneID:530435|KIF17:NM_001105212:206_cdna Constitutive 0 NULL GeneID:530435 2 GENE KIF17 MGC159870 kinesin family member 17 EMBV3_38431 TTCCAGAGGCTTAATTCTATGAACGATCTGTCTGGGAACTGTGGCGTAACTCCTACTGGG Gene GeneID:281599|ADAM2:NM_174228:20_cdna Constitutive 0 NULL GeneID:281599 27 GENE ADAM2 NULL ADAM metallopeptidase domain 2 EMBV3_41490 GTCTTTGGGTTCCGGGGGGAGTATGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAAC Gene GeneID:100336663|LOC100336663:XM_002698294:1027_cdna Constitutive 0 NULL GeneID:100336663 25 GENE LOC100336663 NULL hypothetical protein LOC100336663 EMBV3_38530 TGCGCTGGGTCCTGAGGAGAATTTTCTTTCCATGGATTCCTCCCAGAACGCTTACAATGA Variant GeneID:538943|GINS3:NM_001076136:369_cdna 193^576 2 EMBV3_12684 GeneID:538943 18 GENE GINS3 MGC139995 GINS complex subunit 3 (Psf3 homolog) EMBV3_35003 CCTCTCGGCTTCATCAAAGTCCTCGAGTGGGACTTTGTAATTACTATTGTTGTGACTTTT Variant GeneID:615728|SYPL1:NM_001110088:15_cdna 136^475 3 EMBV3_31784 GeneID:615728 4 GENE SYPL1 MGC137623 synaptophysin-like 1 EMBV3_22898 ATAATATTCTCTCACTGGTTAATGTCAATGAATGTATTTGTTGCAGTTGGAAGGGGTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24913 ATCATCATGTCTTATGCACAAATCGTGTCCTCCATCCTCAAGGTCCCTTCTGCCAAGGGC Gene GeneID:615901|LOC615901:XM_002695695:273_cdna Constitutive 0 NULL GeneID:615901 19 GENE LOC615901 NULL similar to olfactory receptor Olr1466 EMBV3_14378 GGACAGGCCTTGCTCCCTTAGACTTCCAGTGTCAATCAAGTGTCAAGAACTCATCAGGAG Gene BVV0102_233923 - 0 NULL GK000015.2:36210369-36224846 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28258 CAAAGCTTACTTCTAGACTGTGTCCTGTGGCCCCTCTCTCCCCACTCCAGTTGCCCTGAT Gene GeneID:281996|CDHR1:NM_174823:224_cdna Constitutive 0 NULL GeneID:281996 28 GENE CDHR1 PCDH21 prCAD cadherin-related family member 1 EMBV3_12531 ATCCTCACTGAAGCTCCACTTGGAAACAATACTAAGGCCTGTGGCCAGAAGACTGAAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32309 GTTTGGCCCAACCTTTACATAGGAGATGCGGCCACAGCAAATAACCGCTTTGAGCTATGG Gene BVT0102_399026 + 0 NULL GK000028.2:31048604-31058902 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160627 TCONS_00160631 TCONS_00160626 1 XLOC_097693 Coding TCONS_00160631 XLOC_097693 Coding Coding LOC100848566 28:31055735-31057180 = TSS120062 655 1 TCONS_00160631_1 161 0.141984732824427 2 0.547783933518005 0 0 0 0 0 0 0 0 0 0 3.49493994245755e-06 0 0 0 2.2647131335913e-280 0.00104839584740196 0 4.59489044041962e-05 0 0 0 0 0.000252111867121168 0.000127974338392895 0 0 0 0 5.1881313307731e-05 0 XM_005226471.1 DUSP13 PREDICTED: Bos taurus dual specificity phosphatase 13 (DUSP13), 0.0 670 100.00 0.564885496183206 XM_005269890.1 DUSP13 PREDICTED: Homo sapiens dual specificity phosphatase 13 (DUSP13), 3e-144 515 90.21 0.575572519083969 TCONS_00160631_1 sp|Q6B8I1|DS13A_HUMAN MDSP_HUMAN Dual specificity protein phosphatase 13 isoform MDSP; 3e-74 225 84.80 0.770186335403727 0 coding 0 0 1 1 0.0148074328105374 0.919409751560518 0.0232240704162978 0.719359964249409 GCCCATGGCGGAAGCCTCGCTCCCACAGCTGAGGGGAGATGCCGAAGCCACGCCTTGCCCCAGCGTCCTGGAACTGGAGGAGCTCCTGAGGGCAGGGAAGGTTTCTTCCAGCCACGTGGATGAAGTTTGGCCCAACCTTTACATAGGAGATGCGGCCACAGCAAATAACCGCTTTGAGCTATGGAAGCTGGGCATTACCCACGTGCTGAATGCCGCCCACGGGGGCCTCTACTGTCAGGGCAGCCCTGACTTCTATGGCAGCAGTGTGAGCTACCTGGGGGTGCCAGCCCACGACCTTCCTGAGTTCGACATCAGTGTCTACTTCTCCTCTGCAGCTGACTTCATCCACCGTGCCCTTAGCACGCCTGGGGGTAGGACCTGGCATCTGAACCCATGCTCTACCCAGCTCAGTCATGGGGGGATGTCCAGTTTCCCCTTTAACATCAGTGCCCTCCCATCCCTAGTTTGTAAAAAGTCATCATGTTTTTAAAATCCTCTGCTCAGTGTCCCAGCACTTTATCCAGTAGCATTGCTCCACAGACAGGGAAAGGGAGGCCTTTTGAAGGCCTTTTGAAGTACAAGGTCATGCCCCAAGTTAGGAGCAGCCCTGGGGCTGGAAGCCAGGTCTCCCAAACAATAAAACAGTTCTTTCTCT EMBV3_23621 GAGGTTATCCTACGCTCCTCTGGTTCCGAGATGGCAAAAAGGTGGACCAGTACAAGGGAA Gene GeneID:615027|TXNDC5:XM_002697619:136_cdna Constitutive 0 NULL GeneID:615027 23 GENE TXNDC5 NULL thioredoxin domain containing 5 (endoplasmic reticulum) EMBV3_33451 GGTAGTGTGGATATGAGGAGAGAGTGCGCAAAAGGTAACGGTCGATGTAAAACTGAGTGC Gene GeneID:100296935|LOC100296935:XM_002697308:163_cdna Constitutive 0 NULL GeneID:100296935 23 GENE LOC100296935 NULL hypothetical protein LOC100296935 EMBV3_41790 CAGACTCCAAACGGAATCTCAAAAGCAGTGTCTTCACCTTTAGCCCCAGGCCATCTTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39751 AACAGGAACTTCCCGGAGGCCATCCTCAAGGTGTTCAGCAAAATGGAACAGGTGGTGGGC Variant GeneID:100299600|LOC100299600:XM_002691714:90_cdna 217^276 1 EMBV3_34990 GeneID:100299600 11 GENE LOC100299600 NULL similar to ATP-binding cassette, sub-family A (ABC1), member 2 EMBV3_27600 ATGTTACCCCCTGTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAG Gene GeneID:281885|KITLG:NM_174375:23_cdna Constitutive 0 NULL GeneID:281885 5 GENE KITLG MGF KIT ligand EMBV3_38296 GAGGACTTCTATGGGGAAATCCTCAAAGTGGCCATTGTTGGCTACCTCAGACCAGAAAAG Gene GeneID:514697|RFK:XM_002689667:11_cdna UTR3_Alt 2 NULL GeneID:514697 8 GENE RFK NULL riboflavin kinase EMBV3_39595 TTTTTTCCCCAGATCTCTCAGTGGAGAGGTTAAATCCAAGTTCAGAGCACTTAATTATAA Gene GeneID:540816|ZNF189:NM_001099113:15_cdna Constitutive 1 NULL GeneID:540816 8 GENE ZNF189 MGC157047 zinc finger protein 189 EMBV3_15394 ACAACAGAGACAAGAACAAGCAGGAAAAAAGTTCAAAGTTCTGGCTAACCAGTACAAATC Variant GeneID:522529|ADSS:NM_001167809:59_cdna 575^682 3 EMBV3_22344 GeneID:522529 16 GENE ADSS ADSS2 AMPASE2 adenylosuccinate synthase EMBV3_09286 TTCGGTTTTCGCTACCGGAGCCTTCCCCGAACAAACTTCTTGTGCGTTTGCTTCCAACCC Gene GeneID:281820|HOXB7:NM_174342:26_cdna Constitutive 0 NULL GeneID:281820 19 GENE HOXB7 NULL homeobox B7 EMBV3_04246 TCTCAAGAAGAAGGTGGTCAAGGAGAGTGAGCTGCACCGCACAGATTATGTCCGCATCAT Gene BVV0102_393802 + 0 NULL GK000003.2:103355143-103370082 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32991 GTCACCTACCTGTTCGTGCAGCTGTGCAAGGAGTTCATGAAGGCCAGCGTGGACGTGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02292 ATGAGAGGTGCCACGCAAGTCTCAGTGATACTCCTCTTGGTGACCGTGTCCGACTGTGCC Gene GeneID:617599|PROK1:NM_001034018:203_cdna Constitutive 0 NULL GeneID:617599 3 GENE PROK1 PK1 prokineticin 1 EMBV3_00056 AGTCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCC Gene GeneID:508131|ZNF836:XR_084617:19_cdna Constitutive 0 NULL GeneID:508131 18 PSEUDO ZNF836 NULL zinc finger protein 836 EMBV3_22921 GAGTGTCCACGCCTACATCCTGGTCTACGACATCTGCTGCTTTGACAGCTTTGAGTACGT Gene GeneID:522270|RASL10B:XM_002695629:38_cdna Constitutive 0 NULL GeneID:522270 19 GENE RASL10B NULL RAS-like, family 10, member B EMBV3_22859 GGGCATTTCTGGAAAATACTGCAAGGAGAAATAAACCCTACAGATGCCTGGAGCAGCAGA Gene BVV0101_017179 - 1 EMBV3_13913 GK000030.2:80846689-80939905 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22777 CCAGCTTTGATCCAGCAGAATGGGGGGCTAAGGTTGATGACCGCTTCTATAACAACCATG Gene GeneID:616974|SPA17:NM_001076440:44_cdna Constitutive 1 NULL GeneID:616974 29 GENE SPA17 NULL sperm autoantigenic protein 17 EMBV3_19319 GACCCGGTCGCCTTCCAGAGGGCCTTGCAGGGTAATAGGAACTCGTGGAATTGCTGAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21814 AAAACGGAGGGAAGTGCAGGCCGTTGTACCTTGAACTCAGGCTATGCTGTGGAGTATGAA Gene GeneID:538958|LOC538958:XM_002697667:139_cdna Constitutive 0 NULL GeneID:538958 24 GENE LOC538958 NULL similar to Dermatan-sulfate epimerase-like protein EMBV3_18350 CAAGTACACTCTAACCATGGAGGACTTGACCCCTGCCCTCAGCGAGTATGGCATCAATGT Gene GeneID:514443|TAF10:NM_001098968:28_cdna Constitutive 0 NULL GeneID:514443 15 GENE TAF10 MGC148685 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa EMBV3_12872 TCATGATCGGCCTGTAAAGCCCCTAGACCTAGCAGTCTTCTGGATTGAGTTCGTCATGCG Gene GeneID:533587|UGT2B10:NM_001046354:41_cdna Constitutive 0 NULL GeneID:533587 6 GENE UGT2B10 MGC137178 UGT2B4 UGT2B7 UDP glucuronosyltransferase 2 family, polypeptide B10 EMBV3_10639 TCCGACTCTACCATAGTCTACTACAAACTCACTGATGGATTTATGCTGCCGGATCCTCAG Gene GeneID:614118|TSEN15:NM_001076312:29_cdna UTR3_Alt 4 NULL GeneID:614118 16 GENE TSEN15 C16H1ORF19 tRNA splicing endonuclease 15 homolog (S. cerevisiae) EMBV3_43735 AGGTCGTACAGAGCTATAATGTTTAAAACCAAAGAAATCAATGGAACCCTTGCACAAAAA Gene GeneID:533815|STK3:NM_001079607:33_cdna Constitutive 0 NULL GeneID:533815 14 GENE STK3 NULL serine/threonine kinase 3 (STE20 homolog, yeast) EMBV3_43396 CAGGACTGGAGCCCGGCGAGCTGCAGCCAGGTGGTGATCAATGGAGGGGCCACATCCAGT Variant GeneID:783536|SLC23A2:XM_002692198:103_cdna 68^313 1 EMBV3_07412 GeneID:783536 13 GENE SLC23A2 NULL similar to Solute carrier family 23 member 2 (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Na(+)/L-ascorbic acid transporter 2) (Yolk sac permease-like molecule 2) (Nucleobase transporter-like 1 protein) EMBV3_28229 CATTGGAAAGAAGTTCTCAGCCTCTGGACCACCAGGGCAGTGTCTCCCACAAGTTGTATT Gene BVT0102_157592 + 0 NULL GK000012.2:48053124-48104080 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035300 TCONS_00036972 TCONS_00035297 TCONS_00035291 2 XLOC_020882 XLOC_021268 Coding TCONS_00035300 XLOC_020882 Coding Coding PIBF1 12:48051219-48057023 j TSS25911 1069 1 TCONS_00035300_1 129 0.190832553788587 3 0.816301912803722 1.82794773680135e-05 0.000611769825088233 0.00205324596590684 0.000328536861021582 5.173158370993e-06 0.000372547286480998 0.000468863375598799 6.14140382256796e-11 2.24964489152492e-14 0.00036309368280596 3.1972338069822e-50 1.56478952916928e-05 3.56999458051306e-08 6.21364785842633e-46 5.62804012160474e-05 1.20436209379452e-215 0 6.85034395669964e-193 0.00682835182479231 0.00756361747542057 0.0012037969063468 1.30621463684172e-285 0 0 0.00181333476051324 0.00242625675648338 0.00270514793691953 4.56599214044743e-257 5.60863747802058e-139 1.78302384531538e-260 XM_603252.5 PIBF1 PREDICTED: Bos taurus progesterone immunomodulatory binding factor 1 (PIBF1), mRNA. 8e-85 318 100.00 0.163704396632367 NM_006346.2 PIBF1 Homo sapiens progesterone immunomodulatory binding factor 1 (PIBF1), mRNA. 7e-48 196 84.66 0.163704396632367 TCONS_00035300_1 sp|Q8WXW3|PIBF1_HUMAN PIBF1_HUMAN Progesterone-induced-blocking factor 1; 2e-18 82.8 66.10 0.449612403100775 0 coding 1 0 1 1 -1.91111318214061 0.0968919987675124 -0.00583642551725727 0.952683760412075 CATAGGAGAAAATTACCTCCAACAAAGCCTACCACTGTTCTACAGAGAATAAGGAATTGGCAGCAATGAAGCAGATTATCACTCACATGCGTAGTAAGCGTTCCAAGGACAACTTACTTTTCACTAAAATGGAATCCAAAAATGTGACAGAAAATCAGAAATCAAAGACTTTGAATGCGCCTAAAGAACCTGAAGACAATGTATTTATACCCAAGCCAACACTGTTTGTCTTAGTTTCAGCACTCAGGATCTTTCTGGCAGCAACAGGCTTCTCTCTGGTTGTGCTCGTACGCTGCAGAGCAGGAGCTTTGGAGTTTGCAGTTCTGGAGTTTGCAGCTCTCAAGGTCTCCAGTGAGTTTGCAGCTCTCAAGGTCTGGAGTTTGCAGCTCTCAAGGTCTCCAGTGAGTTTGCAGCTCTCAAGGTCTGGAGTTTGCAGCTCTCAAGGTCTCCAGTGAGGCACCCGGGCTCCAGTTGGAGGACATAGGCTTAGCTGCTCTGCTATACATGGGATCTTTGTTTCTCCGACCGGGGATGGAACCCACATCCGCTGCATTGGAAAGAAGTTCTCAGCCTCTGGACCACCAGGGCAGTGTCTCCCACAAGTTGTATTCTGTAGGAAAACTCTTGACTGTTGAAATCACACATGTTGGCAGGGTTATTATTCAGGCATTTTTGATGTACCAACAAAGACTAAATTGAACCATAGAATGTAAGTGCTTTGAGGATAGAAGCTTGTTCCCATTGCCTTACACAGCACAAGATCAAAGCAGATAATAAATATTTGGTAACATAGGACTTAAAAAAAAAGAAACAGTTATTTGCCTGCCCAATTTAGTTATCATCTAAACTGTGGGGAATTTTAGTGTTGAACTAAATAAACTACATGGGGTCACAAAGAGTCGGACACGACCGAGAAACTGAAAAACAACAAATAAACTACAAGGAAAGTGAAAGCAGCAGCTTCTCAGACCACATGCTGCTTCTGCATCAGGCAATACCATTCAGTCTCTTTCATCCGAAACTCACAGTTTGTTCCCACCAATAATCTACTTTCTCTTTCAAGGTGGTT EMBV3_15945 ACAGATGGAATGATAGCAATGTCATATCATTTGTAGAGGGCTCTTTTAAGATCTTTGAAG Gene BVV0102_211464 + 0 NULL GK000007.2:25879954-26174292 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216216 1 XLOC_131196 Coding TCONS_00216216 XLOC_131196 Coding Coding ISOC1 7:26171975-26197450 = TSS161313 3403 1 TCONS_00216216_1 298 0.0837496326770497 5 0.866609091622831 0.00431134210116154 0.00589044888219928 0.00386623569862185 0.0026074253915219 0.00407194433712532 0.00162091532381503 0.00290770470156998 0.0019098099078999 0.00487119583383104 0.000896064965014186 0.00032941432767669 0.000219656563235004 0.000857193184007367 0.00127178788328716 0.00228040153610814 0.00206178116882153 0.00245535119097605 0.002815233175904 0.00358864314403423 0.002426361865749 0.00179164334303843 0.000603915752637884 0.000863785260982788 0.00141299461165692 0.00466589208238956 0.0037153278042627 0.00370205580679979 0.000159775686519594 0.000366441379556157 0.000102403656571662 NM_001101213.2 ISOC1 Bos taurus isochorismatase domain containing 1 (ISOC1), mRNA. 0.0 1907 99.91 0.3111960035263 NM_016048.2 ISOC1 Homo sapiens isochorismatase domain containing 1 (ISOC1), mRNA. 0.0 2123 83.67 0.583308845136644 TCONS_00216216_1 sp|A6QLY4|ISOC1_BOVIN ISOC1_BOVIN Isochorismatase domain-containing protein 1; 0.0 602 100.00 0.996644295302013 1 coding 0 0 0 0 0.23272222843118 0.553550058061685 -0.0533933134588141 0.333206442353391 GCGGGCGGCGGGCGGCGCGGGGAGGCGGGGCCGCGGCGGCCGGCAGTGTCTGCGCCTCGCGGCCTCGGAGCTCGCAGACGCTCGGGGAACATGGCGGCGGCGGAGCCGGCGGTCCCGGCGCTCCCCGGCGGCGGCGGCGCGGGCGCGGGGGCGCCGTCGGGCACGGTCCCCGTGCTTTTCTGCTTCTCGGTCTTTGCGCGGCCCGCGGCCGTGCCGCACGGCGCGGGCTACGAGCTCCTCATCCAGAAGTTCCTCAGCCTGTACGGCGACCAGATCGACATGCACCGCAAATTCGTGGTGCAGCTCTTCGCCGAGGAGTGGGGCCAGTACGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGGTGCGGCTCGTGCCGCTGCAGATCCAGCTCACTACCCTGGGAAATCTTACGCCTTCAAGCACTGTGTTTTTCTGCTGCGATATGCAAGAAAGGTTCAGACCAGCCATCAAGTATTTTGGAGATATTATTAGTGTGGGACAGAGATTGTTACAAGGGGCCCGGATTTTAGGAATTCCAGTTATTGTAACAGAACAATACCCTAAAGGTCTTGGAAGCACTGTTCAAGAAATTGATTTAACAGGTGTAAAGCTGGTACTTCCAAAGACCAAATTTTCAATGGTATTACCAGAAGTGGAAGCAGCATTAGCAGAGATTCCTGGAGTCAGGAGTGTTGTGTTGTTTGGAGTAGAAACTCATGTGTGCATCCAGCAGACAGCTCTGGAGCTCGTTGGCCGAGGTATCGAGGTTCATATTGTCGCGGATGCCACATCATCGAGAAGCATGATGGACAGGATGTTTGCCCTTGAGCGTCTTGCTCGTACCGGGATCATTGTGACTACAAGTGAGGCTGTTCTGCTACAGCTGGTGGCTGATAAAGACCATCCAAAATTCAAGGAAATTCAGAATCTAATTAAGGCGAGTGCCCCAGAGTCGGGTCTGCTTTCCAAAGTATAAGACATGTGAAAGACTGGTATGCTACTCACTGTCAGATGACAGGACTGTAAGCCCAGACAAGCTCTTGTCTCGCGTAGAATTAAAATGTTAAGTCAAAAATTGGCTCCTTTTTTGCGCCTCTTAGTAAAACTTAACCAGTTAGACCGTTTGGGTACCAGCATTTAGTTACACATGTCAAAGGCTTCAGGTGCTGCTTAACTTCTTTTTATGTTAATGTGCTTTTATTTATTAAAAAAAATTGTAATGGAGGTGCCTGTTTTGTCTATACCGTATACACTGATCATACTTTCAAAAGTGCACACTCTTGTGAAGTTTTCCTATACTGTCACAAAGACAGAGATCTCCCAGTAACGGTTTGACCTTTGTATCATTGTAAGATGTATGTTATGATGTTAATATGGATTCAGTGCTTTTGCTTTACAGGTTGATTGAAGTAGGATTATTATATGAGAATTTGAAAACAGGACTCTGGATCTTGTTACCCCTTTCACTCACAATGCAGTCAAGTTATTTATTAAGTTGCGTTGGTTTAACCAGACGAAGTCATGTTGGATAATTATATACCTTTCTTAATTATGTTGATTTTCTTCTGCTCACCATCACTAATTCTCTGTTAATGTTCTCTTTTTTAAATTGAATCTTTTACCTAGAAGGACTCATTGGGTTATTACTTATATTTTTGATTTTGTAAACAGATGGAATGATAGCAATGTCATATCATTTGTAGAGGGCTCTTTTAAGATCTTTGAAGTATTACTTTAGCTGAATAGCTTTATAACCATCTTGAATACATCTTCTAATATGCACTAGATTTAGCAAAAAGATAAAAGACTGGATAAAATGTAGTTTTAAAACATCCATCTTCTTGTTTGATATTTTCTCCACATAACATCCAATTACTGTTAATGCAAAAGGTCTCAGTAATAATTCAGTAGTATTAATTTTGTAGTGATTACTGCCATTCAATAAATTAATTTTCATTTAATACTTATTATAGGGTTTTAAAACATTTTTTTAATGTTATGTGAACATGAAACATTTCTGTCTTTTGTATTAAAGTAATTAAAGAAAATGTATTATGTGAATGAAATCATTTTGTCCCCCACAACATGGATCTTTGATTATTATCCCAGGGATTTGAATATTTATTTAGGGGTATAAAATTTTTATATTTGTAATCTTTCAACTCATGGATATTTTCTAAAAAGGAAAATTCTTTGTCCATGGGAGTAACTGGATTTTATTGAAGGGCCTTCTTAATTATTTAAAAGCAGTAGAATTTTTTTTTAAAACAATGTAACAAAAGCAATATAGCATTCTTCTTATGGTTATATTTAATTGTTTTTCTCAGCAAACTTGTGTGTCAAAAAAGAAGAATCAAAGATTTCTACATGTTTTAAAATAGTTTTTAGTAAATTTAACCTGGTGCTCCTCAAACTAATATGAATACAAGTCACCTGGGGATCTTGTTAAAATGCTGAATCTGGTTCAATAGGTCTAACTTCTGTGCCTGACATTTTACATTTCCAAGAAAGCCAGTTTCCATCAGCACTGCTCAAAAAGGACCATACTTTATAAGTAGCAAGGATTTAACTATCATCACCTGTTTTCCTCCATGGAGCCCTGGCTCTTCCTTTCCCTTGGAACACCACCCCAGTGAAACCTTTTCACAGCTGAAAACAATTCTGTGGCCTTGAGTCAGTCTCCTATGGCTGTGTTAAATTACCACAAACTGAGGTTTAAAATAACACAAATAATAATAATGTGGCATCTTCCAGGCCAGTAGGTGAGAAGTCTGAAATGGATTTCACTGGGCTAAAACCCATCTTTCCCACTAGATTCTAAGCTCCTGGAAAGCAGGACCTATGCATTTATTCTATACTTATTCTGAAAGCTTATTTTGAGTACATCTAGATATTGTTCTATGTGCTAAAGATACAAAGATGCCCATAGAAGCTGAGAGTTTGGTACAAAATCAGATATAGCGTAACTTCTTAGTAAATGTGAATTGAATTATGTCAGAGGTTCAGGAATGTGAATACAGCATTAAAGTAATGCTGTATTTAGAGTAATATAATTTTGAATTCTGCCTTCTTTGCTGATCATGCAAGCAAGGTGACAAGGCCTTATTATTGTAGGAAACCTGAATTAATTTTAATACATTAGTCTTGGAATTGGAAGTGTCTGCAATTTTGTAGGGTAACAGAATTCTTTTAACTGATGTAAATAAAGACCTTGAGCACATAAACTAAAGAAGAGTCCAGTATATTGAATTGCAAGGAGGGTAGAAACGGGATCAAGACACATCATTTATTGAAATATATGGAGAAACTTTAAAACATAAAATATTTGTAAAATTGAAAATAAAAGTGACAACTTGTTTTAACCAGGAAACCAAATACCCTATAATACCCAT EMBV3_08265 ACTCGGTGTCCACTGTGTCTCCAGACTGACTGCCCTTCACATCCCCATGTAACAAACCTT Gene BVV0102_165392 + 0 NULL GK000020.2:64351272-65427791 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09213 GTGGAATCCTAGAACTTAGGGGCCAGAGCAGGGATAACAAAGAGTAGGGAATCAAGGGAG Gene GeneID:100125937|SNX22:NM_001105500:5_cdna Constitutive 1 NULL GeneID:100125937 10 GENE SNX22 MGC142446 sorting nexin 22 EMBV3_29333 TTGGCTCGCAGATCTCTGCTCCCAGATATCCATCGCCGCCAAGGAATTATTCGAAAGGAA Gene BVT0102_377945 + 0 NULL GK000030.2:40585530-40721775 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246905 TCONS_00246904 TCONS_00246903 1 XLOC_151152 Coding TCONS_00246905 XLOC_151152 Coding Coding - X:40719972-40721177 - TSS185012 700 1 TCONS_00246905_1 157 3 0.42109634551495 0 0 0 0 0 0 0 0 0 6.73482870440131e-05 0.000181572801198386 0 0 4.2339692554297e-12 0 0.000954764650406384 0.000247955599178199 3.38649114041949e-101 0 0 0 0.00218969007768912 9.11859240255764e-05 0.000622411352153199 0 0 0 6.86084446478887e-05 0.000745522930291142 0.000144206984691238 XM_005200668.1 LOC101903859 PREDICTED: Bos taurus L antigen family member 3-like (LOC101903859), mRNA. 0.0 1251 100.00 0.988571428571429 XM_003689456.2 Gm15363 PREDICTED: Mus musculus predicted gene 15363 (Gm15363), mRNA. 1e-23 114 71.83 0.302857142857143 TCONS_00246905_1 sp|Q9CR70|LAGE3_MOUSE LAGE3_MOUSE L antigen family member 3; 4e-17 75.5 35.22 0.955414012738854 1 coding TCGTGCGGCAGCCATGCAGGCATCGGGTAGTGGCGCTGGTGGTGCTGAAGGTGAGGGCCCGGGCCGCAGTGGTTACCGGGCCCCATTACGCCGCCGGGGTGGGCCTGGCAGAGAAAGAGCGCTGATGGAAGCTGCTAGAGCTCGTCCCCGGGGTGAGCGGGCACCAGATGCCCCAGGACCTGGTGGAGATGTAGCACCTGTGGCTGTAAGGCCTAGACGTGGAGAGGTGGTGCTCACACTCAGAGTGCCTTTCCAATCCCCACTGGAGGTATACTTGGCTCGCAGATCTCTGCTCCCAGATATCCAACGCCACCAAGGAATTATTCGAAAGGAATTTTTAGTGAATGGCAGTGACCTGATTGTTAGATGGACTGCTGACGACCTTGCTTTCATCCGACTTTCCATCAACCCGTTCCTCGATCAGCTTTTCGTGGTGATTGATAACATTCGGAGCCTTGCGACCCCACCTCCCCAAAGCCTAGGCTGAGGAAAGGGGCTGAAGCCTAACCTTGTGTCTTCTACTCGGCAAAGCATAGGGAATTCATACTCGAGTCATTGCCATTTTGTTGTTTGAGTCTAAGTTTTTGCCTGTAGTGGCCTTTGGTCTCTCTTGGTTCACTTGTTTTGTTTCCCTGCTGCTTGAGGAGTGGGATGCTTCAGTGTTTATTATAGCAGAAAATAAAGCTAAGTTACTTTATGT TCONS_00246908 TCONS_00246907 s 3' 140948 TCONS_00246908 TCONS_00246907 s 3' 140080 EMBV3_35720 GTAGCACTGAGACCCCCATGGTAATGTAACTGAATTTTAAGCTGTGTCACCATTCTCCTG Gene GeneID:282124|VSNL1:NM_174490:36_cdna Constitutive 0 NULL GeneID:282124 11 GENE VSNL1 NULL visinin-like 1 EMBV3_24107 AGTCCACAAATAACACGTGGGACACCACCCTGGGATTAGATGTCCTCTGGCCCTTGGATT Gene BVT0102_065977 + 0 NULL GK000018.2:59463374-59492778 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31869 CTTGGCCTTGGTCCCTGGGCAGTTAGAAAGTAAGAATGGGATAGGAGCCCCAAAGAGACA Gene GeneID:616626|LOC616626:XM_002686964:44_cdna Constitutive 0 NULL GeneID:616626 4 GENE LOC616626 NULL hypothetical LOC616626 EMBV3_11765 TCAGAGCGCTAGCAGACGCCCTTGCTGCCATGGGCCGTGAAGACGTGATTCGGGCTCTGA Gene GeneID:615855|NRADD:NM_001076398:161_cdna Constitutive 0 NULL GeneID:615855 22 GENE NRADD MGC128878 neurotrophin receptor associated death domain EMBV3_40132 CACTAGCTGCCACCTCTGATTGCTTGACCTTGCGTGACTTTAGGTGAGTCACAACCTCTC Gene BVT0102_064287 - 0 NULL GK000029.2:31114596-32358405 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164965 1 XLOC_100373 NonCoding TCONS_00164965 XLOC_100373 NonCoding NonCoding - 29:31119062-31122274 - TSS123314 2805 1 TCONS_00164965_7 101 0.241354723707665 2 0.127063220180629 0.00024737618098931 0.000318826930518249 0.000659821802101894 0.000420634483092053 0.000575563744145693 7.39644048801195e-05 0.000261959307845392 0.000288882662471627 0.000455686360047936 0 0 0 9.71770480142593e-05 1.67699961440691e-06 1.92399779965509e-05 0 0 0 0.000889655575570521 0.000279453748104742 0.000294373782202287 0 0 0 0.000828700198971506 0.000676918252017946 0.000227682265341893 0 0 0 XR_231610.1 LOC101906392 PREDICTED: Bos taurus uncharacterized LOC101906392 (LOC101906392), 7e-53 214 85.26 0.067379679144385 0 noncoding ATAGAGAATCCGACTTACATGCATTTCCTTAAGCTCTTCCTCTTGGGTTGTGCTCTAGTTTCTTTCTATTCAGCCCTGGATTGGAGGTCACCTCTCCCTTACCTGATAGGAGGTCTCATTAACTTTGTGACAGATGGACTCACCCCCTCAGGAGGGACACTGTTCTCCTTCTGTTACTGAAAACTTCTCCCTTGGAAAAAGCCAGAAGGCTGCTCTCCTATTCCCAAATCTGGACCTCATCACATGGAGGTGTGATCTGGGTTCTGAGGTCCTGCGACTGACTGCGTCACCACAGAAAAGATCTGGAGAGGACCAGTACCTCATCTCTGAAAGCAGCAAATGAGTCCAAGTAAAGAAATACACAGCATCCAGAGCACAGTGATAACCATGATGCTATTACGATCCCCATGCTGGGAAGGACAGAGGGCAGGAGGAGAAGGGAGCAACAGAGGATGAGATGGTTGGATGGCATCGCTGACTCAAATAGACATGAGTTTGGGCAAACTCTGAGAGATGGTGAACAACAGGGAAGCCTGGCATGCTGCGGTCAATGGGTTTGCAAAGAGTCAGACATGACTTAGAGACTGAACAGCTACAGTATCTGCATCACATATAAATGTATCAAGTGCTTTCACTGAGGTACGAGCTGAGGGCCTCCTTGATGGTTCAGTGGTTAAGAATCTGCCTAGCAATGCAGGGGACATGGGTTCCATCCCAGTCTGGGAAGACGCTACATGACTTGGAGCGATTAAGCCTATGTGCCACAACTACTGAAACCCCTGAGCCCTAGAGCCCAAACTCCAACAAGGGAGGTCACTGCAGTGAGAATAGAAGCTGCTTGCTGCAACTAGAGAAAAGTCTGCGTAGCAACGAAGACCCAGCACAGCCAATAAATAAATACTAAAAAAGAAACGGCTGAGATTTTGGATACGGGGCATAAATGACAAGATAATAAGGCTATACACTTTATAGAACAGGTTTCTCTACCTTGCAGGGTAGTTTCACACCCATTGTTTAACATGATCACTTCCACTTGGAACATAAATGGAGCAGGAAATATCCACCTCCTCTTACAAGGGGCTTCCCTGATGACTCAGACGGGAAAGCAGGATGCGGGAGACCTGAGTTTGATCCCTAGGTTGGGAGGATCACCTGGGGAGCCCAAGGCCTGGAGAGGTTGTGACTCACCTAAAGTCATGCAAGGTCAAGCAATCAGAGGTGGCAGCTAGTGGAGGGCTCCAGAGCCACAGATGAGGATGGAATGTTCTAAGCCATGCCCTCCAGAAAGAGAAACATTCATTGCTTCCTGTGCTGCAGCCAGAGGACCCTCTTAGCTAGAAGTACCTCATGCAAATGAATTCTCCTCCAGGGAAGAGGATACAACCAATCAGTTGGAAAGTAAATGCAGTTAATATCAAAATGAAAGCCTGGAAATTGCCTCTCCTATCCTATCCACCGAAGTGCATGGTCCTCAGATCAGTGGCACCATGCCACCAGCCTGCCTATAAGAAATGCATAATCTTGGGTTCCACTCAAGAGCCACTGAAGCATTATCTGCATTTTAACAAGATTCCCCCAGGTGATTCACATGCAGATGAATATTTGAGAAGCCCCAGTCTAGATAATTCAGACAGGAAATCACTTTGCCATTGATATGGTCCTAAATTCACTGCCTCAGGGAAAAGCTCTCCTTTGCACTGCTAGACCAAGATGACTTTTAGGATCAACCTACCTAATTATCTACCCTCACTCCCTACCTGAGCACATCCATCCAATTGTCTGTATCAATTCATCTACTTCAATCCCAGTTGGCTCTTCTCTTGACAGAACATGTACAGAAAGACCATAGTTGGGGTGTGTGTGTCGGGGGGGGGTGGATCTTTACTTCAGAAATGGACTTCATGGAGCTGAAAAAGGAATTCAGTAGAACCCAACCTACATCATCTTGAAGTCTCTTGCGTTCCTAAAATCCCATAGTCCTGTTTCTACGTTGTGCTCTTGGTTAGAGCTCCTTGTCCTATGTAGCTTTCATAACTTTTCCTTGCCCTGATCTCTGATATATCCCTATTTGTCAGCTATTTACCGGGGGATAAATTTACTTTTTAATCTATTTACTTGGGTATACATGTACATGCACAGTGGATTGCTCTCTTGATTACTTCTGACCTCTATTATCTGAAGAGCCACCCGACAGCGACTAACTCTACACGGTCACTCTTATTTGAATGGCTCCATCTGGAATCTAGAGGAAGAATGTTCTTGGGAGAAACACGTTCAGTCTATGACCCAGTTTCGTCTGTTTTGCAGAAATAAGACAGCTGTACCTGGCTCTTTCCCTTGGAGACGTGGGGACACATTACATCATGCATAGGGAGGTCTCACAAAGGTGCACCAGTATTGAACGGTATTATTACCCTATCGCCCCTCAATTAAAATAAGTGGCACTTTAAAAATGCAGTAACAGCTGCTCTCAGCAGTGTCTCCTTACAAAGCATTTGCGTTCTCAATTTTTGCCTTTCCCTACAGCCTTTTATATCTTTGTTTAAGCTGTGCTTCATAGCCACCATTGTGAAATCCACAGGACTCCTAACTTCAAAATGCCCAATTAATCCAAAATCAAAAAAGAGCCCAAGGACCAAGAAGATGCCATTCAACTCTCATACCTGGACCCTAAATGCCCTTTGCCATAAGAGTATTTTGCAGCAGTAGCTTTATGAGGTCTTCCTGTGAGGCTATCAAATCCACAGGCATCATACTTGGGCCCTAAAAGGAGCCAGTGGCGTGCAGTGAAAGGCAGCAAGTACA TCONS_00164964 s 5' 4468 TCONS_00164964 s 5' 7023 EMBV3_33596 TATCTCTTGGAGCTCACAGAGTGGACGAAAGGGAGTCAAGCCTCCTGAGGCGTTTGGAGA Gene BVT0102_414673 - 1 EMBV3_43775 GK000004.2:1-407813 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00063810 TCONS_00178732 TCONS_00218950 TCONS_00123275 TCONS_00063805 TCONS_00230831 TCONS_00117596 TCONS_00167122 TCONS_00230834 TCONS_00186490 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00149043 TCONS_00161424 TCONS_00116087 TCONS_00101341 TCONS_00088422 TCONS_00106013 TCONS_00238290 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00238291 TCONS_00223049 TCONS_00231769 TCONS_00033186 TCONS_00217532 TCONS_00230833 TCONS_00011614 TCONS_00178734 TCONS_00162571 TCONS_00142474 TCONS_00230354 TCONS_00010832 TCONS_00168478 TCONS_00142472 TCONS_00129561 TCONS_00231774 TCONS_00157807 TCONS_00066112 TCONS_00176791 TCONS_00071703 TCONS_00238280 TCONS_00131535 TCONS_00011615 TCONS_00232767 TCONS_00162567 TCONS_00098201 TCONS_00162570 TCONS_00071451 TCONS_00158314 TCONS_00186834 TCONS_00154284 TCONS_00033205 TCONS_00230832 TCONS_00231776 TCONS_00063811 TCONS_00212984 TCONS_00222175 65 XLOC_090921 XLOC_038536 XLOC_108505 XLOC_132269 XLOC_074829 XLOC_038531 XLOC_140321 XLOC_071762 XLOC_101958 XLOC_140324 XLOC_112542 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_090920 XLOC_098315 XLOC_070256 XLOC_061582 XLOC_053209 XLOC_062697 XLOC_144957 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_144958 XLOC_136355 XLOC_141257 XLOC_019420 XLOC_131531 XLOC_140323 XLOC_007165 XLOC_108507 XLOC_099452 XLOC_086899 XLOC_139844 XLOC_006383 XLOC_103118 XLOC_086897 XLOC_078274 XLOC_141262 XLOC_096262 XLOC_040830 XLOC_106565 XLOC_043473 XLOC_144947 XLOC_080240 XLOC_007166 XLOC_142251 XLOC_099448 XLOC_058447 XLOC_099451 XLOC_043222 XLOC_096768 XLOC_112885 XLOC_094044 XLOC_019439 XLOC_140322 XLOC_141264 XLOC_038537 XLOC_130301 XLOC_135484 Coding TCONS_00080098 XLOC_048982 NonCoding NonCoding - 17:37120691-37121809 - TSS60038 1118 1 TCONS_00080098_2 78 1 0 4.78753310707479e-05 9.4932339466094e-06 3.43843363013195e-05 6.06723695704804e-05 9.08988479709594e-05 6.51622043694459e-05 5.11705138933887e-05 0.000183253491462736 0.000182535013518509 6.81731190344836e-05 6.83946942535167e-05 9.87829255393725e-05 2.67502466787108e-05 0.000166312604361232 0.000148086674799101 0.00241017982236107 0.000337250628166226 0.00122244424164627 9.19664755724166e-06 7.06056940996818e-05 1.47837106007788e-05 0.000312153434511185 0.000488458609486617 0.000555318184846704 2.63112376039151e-05 3.96200823018996e-05 2.60508865532784e-05 6.2278174362547e-05 0.000192546472292626 0.000120648690903383 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 3e-39 167 74.63 0.237924865831843 0 noncoding 1 1 1 1 -0.069690739815313 0.656150057551822 -1.10078665842033 0.00368417958290911 GCCGTCGTACCTCGCGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACACCAGAGCCTCCCCCGTCATCGCGACTTGAGGGCCTTCGTCTCCTGTATGGCCTAGAGACCAGTCTCTCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCAAGAGCAGAGCGGAGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAATGCAACCCCGAGATCCCTTTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTGGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCAACACAAGAGGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCTGCAACTCGAGAAAATCCACGTGGTTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGTGTCTCAGGAGAAGTCCCACGTTAGGTATTGGAGGTCGAAAAAGGGACTTGGCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTGACGGTTAAAGAGGAACACCGAGGTTTTCCCGAACCACTTCCTCTGAGCACCCTTCTGCCCTCCTGATCTCGACAGGAGGGTCGACTCCGCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTAGCCTCGTGGGTGCTTCCACATTGTGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCACCCTGTGAATGAAGTCAACACGAAGGGGCAGTCACTCGTCCATGTATCGTCCGGAAAAACCCCCAGGTTCCAAATACTTCTCTATTAGTGGCCTCTCTCCCCGGGGAGACCTCTAGAGATAAGCGGAGTTCCATGCCACAACCCAAGACGAGGCCTGACTCTCCTGTTCCCAGTCTGCAGGGACCCTGCGATCAGAGTCTGAAATCAAAGGAACCCGGACGTTCCTGCCTCTCCTGGAGAT TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 EMBV3_10532 TCTCAGGCACCCTACAGTTTACTTGAAGCACTAAAACAGCATTTGGCTTCTCTGGAGGAC Gene GeneID:529992|LOC529992:XM_002699706:48_cdna Constitutive 0 NULL GeneID:529992 X GENE LOC529992 NULL similar to PICALM variant protein EMBV3_02176 GTCTTCAGTTCTTCTGGTATTACCACATCCACTTTCACCCATTTTCTATGAGTTGATGTG Gene BVV0101_065320 - 1 EMBV3_27770 GK000013.2:20975353-20992708 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042208 TCONS_00042211 TCONS_00042204 TCONS_00042214 TCONS_00042197 TCONS_00042198 TCONS_00042210 TCONS_00042215 TCONS_00042212 TCONS_00042200 TCONS_00042206 TCONS_00042196 TCONS_00042199 TCONS_00042202 1 XLOC_025618 Coding TCONS_00042200 XLOC_025618 Coding Coding LOC524240 13:20760192-21109505 j TSS31471 3949 1 TCONS_00042200_12 951 0.0382375284882249 26 0.98876935232686 0.00212992466969654 7.34698318469847e-11 0.000829352919090965 1.11982427164496e-06 0.00198446083698563 0.000390806182411483 0.000847847072231015 0.00225326948421451 0.000292393487439006 0.000173726235585157 5.01182431219136e-08 1.08512679347097e-26 0.00125318893738582 7.20704255637233e-09 1.91710674750751e-05 5.7712656081251e-07 1.93310695229271e-09 5.40792272480083e-24 1.93344832938488e-07 4.16028602215714e-05 7.68227563206664e-13 4.61516645603602e-124 3.48836730768925e-21 0 0.00233435194679762 0.00128436485271361 0.00109398249808462 1.39745860431333e-31 9.9783525337359e-08 1.0404911133974e-07 NM_001099190.2 MGC152301 Bos taurus uncharacterized LOC783682 (MGC152301), mRNA. 0.0 1635 99.67 0.231451000253229 XM_005252651.1 C10orf112 PREDICTED: Homo sapiens chromosome 10 open reading frame 112 (C10orf112), mRNA. 0.0 1844 83.43 0.439858191947328 TCONS_00042200_12 sp|Q5VYJ5|CJ112_HUMAN CJ112_HUMAN MAM and LDL-receptor class A domain-containing protein C10orf112; 3e-159 510 79.66 0.309148264984227 0 coding 0 0 0 0 -0.145815443770699 0.43909058353021 -0.0269811012278478 0.561757471163894 CTGAGACTCTAGAATTGATTTGAGGAGGGAGTGGGTTGAGTGAAAGAGAAATCTGATCTAAAAATACAGGGTCTGTAGAGATGATTTTGCATCTAAGGGTATTTTCATCATAGCAGCTAATTTCTACTGTTATGGACTGAATGTTTGTGTCCCCTCAAAATCCATGGATTGAAATCCATACCCAGCATGCATCAGAGGAAGTCTTGTGAGGACCTAAGAGGAAGACATCCCTCAGCGAGACCTGGGCCACACTGGCACTCTGACCTTGGACTTCCAGACTCCCGAACTATGTCCAAATGGACTAAGACATGGCAAGAAGTTTTCTGTTAATGCCGCCTGGTGACCTCCTTGCCTATGCAACCATCCCTACGCCACTGGGAGGTGAGATCAAGCTTTTGGAGCACTCTTCCGTGTTTTGTAATAATATCAAGCAGCCTGTCCTGGGGCTTCCTCCCTCCCTCCCTCGCCTCTGCACTCTTGCCAAAGAACAAAGGACAAAGGCTTCCCTGGTGGCTCAGCATTTGGTGACACTCTTCTCTAGCTGGTTGGCTCCCCCGACATTACAGCAGAGGCTTTTGATAAGACAAAGCTGAATTTATTGCTTACCATGGCTCGGATTATGAAAGATGTGATTTTGAGGATGGGCTTTGTAGTATGATACGAGATCAGAGTCTGCGACTTGGCTGGACAAAGAGGAATGGGCTGATCGGCCAGTCACCTCCATTTTATGATCACAATGGTGATATGTCTGCTCACTTCCTCTCATTGGTCTCTGACTTGGATTCTACTTCCTCAAACATAAGCAGCAGAGTTTTTCTTCCAACGAATAACCAGCATGCTTGTCAGATTACGTTTTATTGCTTCTCCAGCCAAATGAATGGCAAATTAATGGTTGGCTTTCAAACTACCTGTGGTGGCCCTATACAGCATTTATGGCAAAACACTCCTGGGCTCCAGAATCGTTGGGAGAGGAATGTCATCAAAATTCAGAGTCCCCAGAGGTTTCAGGTTATTTTTCAAGGCCAGATGATTTCAGCTCAGGATGAAGTCATAGCTATTGATGATCTATCTTTCAGCTCAGGCTGCTTGCCAGCAGATGATGACATTTTGCCATGTCAAGAGGCATCAAATACCGAGAAGGAACTATGCCATCCAGATAGAAGTCTCTGCAGATTTGATTCTACAGATGAAGGATTGAGGTTGTGTCAAGCCTGTGGATTTGCATTTGACATGTGTGACTGGGTATCAGAAGCAACTGCTGGGCAAACTTCCTGGATGCGCACAAAAGCAAGAGAAATTCCTGTGTTAGAAAATGCACCTCAACAACATCAAAGCAGTGATGATGAAGGTTACTGTCTATGGATAGGGGCTAAGCAAGCTTCTACTCTTAACCATTTAGACAGCAGGGCTTATCTGAATAGCTCCGTGTGTCACTGCCTGGGCAGGAGCTGCCATCTTCAATTCTATTACGCTATGGAAAACAGTGTTCTCAGAGTAGGACTGTCTAATGATAAGGAAGAAGAAACATTTTGGATATACAACACATCAACTCATAGAAAATGGGTGAAAGTGGATGTGGTAATACCAGAAGAACTGAAGACATTCAAGATTATTTTTGAAGGAACTGTTTTGAGCCACAAAGGTTTTATTGGGCTTGATGACCTGTGGGTCTACGCCTGTGCCCAGGCCCCGTCCAGACAACTTTGCTCTGCAGATGAATTCACCTGTGGCAGCGGCCAGTGCATTGCTCGAGAATCGGTCTGTGACTCTTGGCAGGACTGTTCTGATAAGAGTGATGAGGACCTGACAACTTGCTCCAGTCATCTCAGGTGTGACTTTGAGTCTGGTTTCTGCGGCTGGGAGCCATTTCTCACAGAAGATTCACACTGGGAATTCATGAAAGGGTTGCCCAGTGCAGACCACCATCTTCCTGATGCTGAGTACCCAACAAACACAAATCATGGATCATTTATTTATTTTGGGGCACATCAACCACCTGCAGTGGCCAAGCTTGGAAGTCCTGTTCTTACAAAATCAGTCACTGCCTCTACCCCATGTCAGGTGCAGTTTTGGTATCATTTGTCTCAGCATTCACGTCTCTCGCTTTTTACAAGAACATCTCTGAATGGGGATTTGCAGAAGCACAGTGATCTAATCGGAATCTCTGAATCTCAATGGCGACAAGCAAAAATCAATCTCATTGCAAAGGCTGGAGAATCTACTCTCCCTTTTCAGTTAATTTTGGAAGCTACAGTTTTATCATCAAACGCTACTGTTGCTCTAGATGACATCAGTGTATCCCAGGAATGTGAAATTTCATATAAGACACTTCCAGGTACTAGTGTACAAAGCAAAGCTGGACTTGCGCCACCTGAGGACGCAGGCTGGACTTCATCCAGCAGGGTGCATGATTTCACGTCTGACTGTCCAGATGGAGCAGAGGAAGCTAACTGTGTTACCGAATGTGACTTTGAAACAGATAGCTGTGGTTGGTTTGAAGCAGCCCGTGGTGATGATTTTGAGTGGACCTGGAGCTCTAGAAGTAACCTCTCTGCTGAATTTGAGGATCAGGCTCCACCTTGGGATCACACTCACAACACATCTCAAGGGCACTTTATGTTCATTCTGAAGAAAAGCAACAGCTTATCACAAATTGCTAGACTCCAGAGCCCAACTTTCAGCCAGACAGGACCTGGATGCACTCTTTCCTTCTGGTTTTATAACTATGGCCTATCAGTGGGGGCAGCTGAGTTACAGCTACACGTGGGAAATTCCAGCGAGTCCACGGTACTCTGGAGAGTATTGTATAACCAGGGTGACCAGTGGTCACGGGCAGTTGTTCAGCTTGGACGTCTTACTCAGCCTTTCCATTTGTTGCTACATAAAGTCAGTCTTGGCATTTATGTTGGTGTCTCAGCTATTGATGATATCAGATTTGAAAATTGTCTTCTTCCACCCCCCTCAAAGAGCTGCAAAGAGCCAGATCATTTCTGGTGTCTGCACACTAGGATTTGTGTAAAAAAACTTCAGTTATGCGATCTGGTGGATGATTGTGGTGATTATACTGATGAGGTCAATTGTGTACCTGAACTTCAGTGTAACTTTGAAAATGGAATTTGTAACTGGGAACAAGATACAGAAGATGATTTTGACTGGACCCGGTACCAGGGCCCAACATCAACGCTTAATACAGGGCCGATGAAGGATAACACTTTGGGCACAGCTCAGGGACACTATCTGTACATCGAATCTTCCGAACCACAGGTTTTCCAGCACCGAGCTGCTCTGCTCAGCCCGATCCTTAACGCCACTGATGCGGAGGGCTGCACCTTCCGCTTGTACTACCACATGTTCGGAAAGCACATTTATAGGCTGGCCGTCTACCAGCGAGTCTGGAACAACACAAGAGGACAGCTGCTGTGGCATATATTTGGGAATCAAGGCCCCATTTGGATACGGAAATCTCTCAACCTTTTCAGCAGGAAGCCTTTTCAGGTCATTTACCTGTGAACCTTCCAACTCCACCAGAAACTACAGTTCCAGTAACACTGCCTCCACACAACTGTGCAGACAGTGAATTTGTTTGCAGGTCTGATGGTCAGTGTGTTGAAAATATCCAGAAATGTGATTTTAGATATGACTGCCCTGACCAATCAGATGAATCCTCCTGCGCTATGGACATTTGCAGTTTTGAGAAAGGAAGCCTGTGTAAATGGTACCAGCCAATCTCAGAAAAATTAATTAAAGATTCAAACACATTCAGATGGGGACTTGGTAATGGAACCAGTATTCATCATGGTGAGGAAAATCACAGGCCATCGGTGGATCATACAACGATGTACATACTTATGTCTCCCAACTGTGAGAAGACGTTTTATTGACATGAGCTAGAGAGGAAAAAAGCAGAGATATCACTTTGCTGACAAAATCTGTATAGTCAAAGCTATGG EMBV3_07087 GCGACAGAAGAGACACCCGGGCACCTGGACACTCACTCCTTTTTTTAAAGACAATGGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30275 CGTGCAGAACACTTTAGGAGCCGTGGTGACAGCCATTGACATACCACTAGGTCTGGTGAA Gene GeneID:537916|ZFYVE1:XM_002690997:298_cdna Constitutive 0 NULL GeneID:537916 10 GENE ZFYVE1 NULL zinc finger, FYVE domain containing 1 EMBV3_33330 TTTGTGAGAGGCCACTATGGTTAATCTGAGGATTTATGATTTTATTCCAGTCCCTCCAAG Gene GeneID:508699|LRRC57:NM_001031754:133_cdna Constitutive 1 NULL GeneID:508699 10 GENE LRRC57 FLJ36812 MGC140628 leucine rich repeat containing 57 EMBV3_23228 TCTAGGCGCTCAGAGTCACATCATGGGCAGGCAGACACACATAGGCAGAGAGAATCTGTC Gene GeneID:100336630|LOC100336630:XM_002686070:321_cdna Constitutive 0 NULL GeneID:100336630 3 GENE LOC100336630 NULL profilaggrin-like EMBV3_41923 GTACATCTCACTGGAATAATTGTTATGTGGCACTGTGCTGTATAGCTAGTTCTCACTGGA Gene GeneID:526460|TSPAN13:NM_001035362:35_cdna Constitutive 3 NULL GeneID:526460 4 GENE TSPAN13 MGC128160 tetraspanin 13 EMBV3_30767 GAGGTAGAGAAGAGTGATTGACCATACTGGGACGTGGGAAATTTGGGAAGGGGAAAAGTG Gene BVT0101_061049 + 1 EMBV3_09146 GK000003.2:37039666-37266784 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26879 ATGTGGATCAAGGCCGCTGCACCCAACCCAGCCTCAGTCCAACAAAGACCTTGAGACTCG Gene BVT0102_391900 - 1 EMBV3_41776 GK000013.2:42566092-42791821 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042733 TCONS_00042732 TCONS_00042731 1 XLOC_025745 NonCoding TCONS_00042731 XLOC_025745 NonCoding NonCoding - 13:42674267-42681071 - TSS31746 1631 2 TCONS_00042731_1 36 0.142857142857143 3 0.760693811553726 8.68432550331581e-09 8.39801907974999e-05 0.000355547230952203 4.22329161921483e-10 3.88012136096597e-05 2.42730489305299e-10 0.0012389184969957 1.04638228043775e-12 0.000157383926057443 1.56769467127751e-10 8.71872222842411e-13 1.08929407874739e-12 1.47008282937536e-13 3.06845762733444e-05 4.70782863603114e-12 0 0 0 7.2514734905597e-09 0.00139770273049435 9.94559008449336e-05 0 0 0 0.00133550287950233 1.00467591684773e-10 2.29601189522784e-09 0 3.06625879046053e-12 6.33226097484854e-09 XM_005227463.1 LAMP2 PREDICTED: Bos taurus lysosomal-associated membrane protein 2 (LAMP2), transcript variant X1, mRNA. 1e-15 89.7 76.19 0.0729613733905579 0 noncoding 0 0 0 0 0.0690294721572733 0.626255027414692 0.0342624611649345 0.63015544035676 CATTCAGCCCTCACCAAAAATACCTGATGGGACTCAGAATTCACAGCCCTCCACTGTGCCCTTCTGCTTCTCCCTGAAGCTGCTGACAGCTCCTCAAGGCCTCTCATCCATCCCCTCTCATCCTTCCCCTGACCACTGCCCTCACCCACAGCACCCAGGAACTCAAACAGAGCAAACAACGAGGGCTTCTGTCCCCAGCTCAACCCTCTTCCCGCTGAAGCACAAAGCTTTACTTCTGATCCTTGAAACCATGCATGATGCACGTGAAGGAGGAGTGACCTGGACCAGAGTCCACTGCCTGGACCAGAGCTCACTGACTGGACTAAAGCTCAGTGACCAAGTACCTTGAAGCCTGAGAGGAGCCCACAGGCAAGGTCTCTGTGTGCAGATTAAGTGGTCCAGAGTCCAGAGAGGCCCCCACCACACTCTCGGCAGGAAGAGGTCAGCACAGGGGTGACACAGCACCCGCCAGGGAGGGAGGAGCCTGACGGAAGGACAGCTTGGCCATCCTGCTGGGATGTGGATCAAGGCCGCTGCACCCAACCCAGCCTCAGTCCAACAAAGACCTTGAGACTCGGAGGGGGGCCGCAAGGTCCCCCAGAAGGACTCAAACAGAAGTTAGCTTGGTTGCAGGCTTTAGAGTTTATTTACAAAATAACCAGCCTTCTCACTCATGCTGGAGACAATGGTGGAATGTTACTTCTTACAAGACCTTTACTTTGTAGTAAAGTAAAAATGCTATATAATTACTTGTTTCAGCAGATTTCTTGGTGATTTTATTACAAAGGCTAGAAAGGAAAATACTGCCATACTGCTGAAATTATGTGTAATCCTGTAAAAACAATGTATGTACCCAGGTTGCTATGTTTTTGCTAAGTTCCCCCTCAATTAGTTTACAAACAAATCCTCTTTTAAATGTTCAAGAGGAACACATTTTTAAAAGAAGGTCATGGCAAATTTTCTTATACAGCTAACACTTCCTTTTTAATGTGATTATTCTAAAACATATGAGAATGGAATTTAACAGTTTTAGACTGGTTCTGAATGTGTTTTTAATTAGCTGTAAACTAGGGCCCATGACTTAGCATCTTCGAGCCTCCATGTCCTCCTCTATAAAATGACGCCATTGGCCAGTTCACATCTCAGACACCTTCCAAAATTACTGTCCTAGTGATGCTGATAAAAGTCATACGTCTTAGCCACAACTTAAAAACACTATCCCGAGGTCCCACAGAACACAAACTTCTATCCGTTGATATCTCTGCTACAGTTTCATATTATTGAGCACTGAGGTGTTTGTTATACTTTCTGACACAAACAATAATCTAATCAACATCCTCAAAGCAGTTATCCTAGAGATTGTTGCTGAGCAGTGTGATCTTTTGAAATGCTCTCTTTATCACATATAAATGGTAGATCCTGGGACTTCCCTGGTGATCCAGTGGCTAAGACTTGCACTTCCATGGTGGGGGACATGAGTTGAATCCCTGGCTGAGGAACTAGGATCCTGCATGCCGTGCAGTATGGCCAAAAATTTTTTTTTAATAAAATAAACTCTAGATTCTGTTTCTGAGTTATTTGTTCCATTAATTTCTATGTCTTATTGTGCAAATCATTATATCTTTATAACA TCONS_00045197 r 5' 108177 TCONS_00045197 r 5' 108177 EMBV3_05845 GCCTGGGCAGATCATCATCGCACAGCCTCAGCAGGTGATGCAGCAGATCATCACGAACAC Variant GeneID:534003|NFYC:NM_001034598:218_cdna 719^835 1 EMBV3_42379 GeneID:534003 3 GENE NFYC MGC128196 nuclear transcription factor Y, gamma EMBV3_09118 AAGACTGTGGGCCTGTGAGAACAGTGGAACTCGAGCCACAGAACAAATGCATCCAGACTT Gene GeneID:100296625|LOC100296625:XM_002699375:322_cdna Constitutive 0 NULL GeneID:100296625 29 GENE LOC100296625 NULL similar to HRAS-like suppressor 2 EMBV3_20055 CCCTTGCTCTTCTCATCAGACGGTATCACTCTCTGGGAAGGAAGAATGAGAGAAGCTACC Gene BVV0102_008078 + 1 EMBV3_04573 GK000003.2:22442579-22486869 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08230 GCTGAAGCTTGGGCTGTTCTGGGGCAGAGGAGAGAAAAGTGATTAACCAGGTTGTAGAAT Gene GeneID:768246|FBXO16:NM_001078119:64_cdna UTR3_Alt 1 NULL GeneID:768246 8 GENE FBXO16 MGC152102 F-box protein 16 EMBV3_31527 GGATAAGGTCATCACCAGCCGGAGAAACAGTGCAGGCCTCCTGCCAGCTTCTCCTCACCA Variant GeneID:526282|MRM1:NM_001101126:259_cdna 591^847 2 EMBV3_15341 GeneID:526282 19 GENE MRM1 NULL mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) EMBV3_14398 GGAGATACAGCTTTTGACAAGGACATCCTGGGCTCCGTCAGTGAGCAGATCCAGAAGAAT Gene GeneID:614251|PNCK:NM_001076319:79_cdna Constitutive 0 NULL GeneID:614251 X GENE PNCK MGC142416 pregnancy up-regulated non-ubiquitously expressed CaM kinase EMBV3_07751 GACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACTAAACTTGTTATTGTGAAGGA Gene GeneID:533270|PRKD1:XM_002696716:124_cdna Constitutive 0 NULL GeneID:533270 21 GENE PRKD1 NULL protein kinase D1 EMBV3_23364 TCCCTTTCCAGCCGTACAAATGCCAAGAGGAGTACATGAGCAAGGTTTTGGAGTGTCTGC Gene GeneID:100336708|LOC100336708:XM_002692247:1524_cdna Constitutive 0 NULL GeneID:100336708 13 GENE LOC100336708 NULL regulator of telomere length-like EMBV3_21350 GATGCCAGCCTCCCAAAAAGCCAAGAGGAGAAGAACTGGTTTCAGTGGTTCCAGGACGAA Gene GeneID:534148|BLM:XM_002696583:16_cdna Constitutive 0 NULL GeneID:534148 21 GENE BLM NULL Bloom syndrome, RecQ helicase-like EMBV3_40919 TACGAGTGGAACAGGACTCCCTGTTGACAGGGTTACATTGTTGGATCTTATGATTGCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34776 CCTCACCAGTGACGGTTAAGACTCCCAAGGCCCGAAAGAGGAAAAGTCATGAAATGGAAG Gene GeneID:782598|LOC782598:XR_084009:16_cdna Constitutive 0 NULL GeneID:782598 21 PSEUDO LOC782598 NULL similar to M-phase phosphoprotein 1 EMBV3_40665 CTTTGGTCCGCACTACGTGGGCGAGGAGCGAGGCGCATTCTCCTCTGGGCCGCCTCGGAG Variant GeneID:512781|ARL13B:XM_002684668:14_cdna 70^153 3 EMBV3_09772 GeneID:512781 1 GENE ARL13B NULL ADP-ribosylation factor-like 13B EMBV3_10925 ACAGCCATTAAAATGAAGCAACCCTGCCAGGTCTCATTGTCCATGAAGGAGCTGCAGTTT Variant GeneID:781742|MARCH11:XM_002696445:88_cdna 502^694 1 EMBV3_18646 GeneID:781742 20 GENE MARCH11 NULL membrane-associated ring finger (C3HC4) 11 EMBV3_10966 GTAACAGAAGGTCACAATTTCCGTGAGGGGCGCCTTTGCTTTGAACTAACGTGTCAGTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37588 AGTCATGTAGCTTCACTCTGGCAGTAAGACTCTAGGGAAGTAGTGTCCAGGTCATAACTC Gene GeneID:538949|ESCO2:NM_001101182:61_cdna UTR3_Alt 3 NULL GeneID:538949 8 GENE ESCO2 NULL establishment of cohesion 1 homolog 2 (S. cerevisiae) EMBV3_18718 GTACGCGCATCGCAACAGTTCTCCAACCTATTCCGACAGTTCATCTGCGTGTCTGTCCAT Gene GeneID:524443|T:XM_002690387:3_cdna Constitutive 0 NULL GeneID:524443 9 GENE T NULL T, brachyury homolog (mouse) EMBV3_13344 AACATCAAGAAGACCGACCTGCGGCCCATCTACATCTTCGTGCAGCCGCCCTCACTGGAT Gene GeneID:281217|GUK1:NM_001159412:4_cdna Constitutive 0 NULL GeneID:281217 7 GENE GUK1 NULL guanylate kinase 1 EMBV3_00757 GTTGTGGTAGTCTGAACACACGCTCACAGAGCCATACGTTCTATCCTCGCTGTTAGGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03644 TGCATCTGGTCAGTTTGTTTTACATAGACCAAAAAGATACATTCTACAAATTAAGGCAAC Gene GeneID:534389|MGC143209:NM_001102171:26_cdna Constitutive 2 NULL GeneID:534389 20 GENE MGC143209 NULL hypothetical LOC534389 EMBV3_21540 AAAATCCCCTCTCCTAACAGGCCCAGGACAAAGCATGGCTCTGGCGCAAAGTCGAAACAT Gene GeneID:515496|LOC515496:NM_001035309:25_cdna Constitutive 0 NULL GeneID:515496 7 GENE LOC515496 MGC128508 mitochondrial carrier protein-like EMBV3_19116 AGATGGGCCTGTCTGCTTTGGACAACTTCTGGGGATGTGTGACCATGTCTCCTTGGCACT Gene GeneID:508542|PRODH2:NM_001104967:568_cdna Constitutive 0 NULL GeneID:508542 18 GENE PRODH2 NULL proline dehydrogenase (oxidase) 2 EMBV3_22619 TGTGGAAAGAGAGGTTGGAGGTCCCCCTGTTTTACAGATGCCCTCAGACCCGGATGTTAT Gene GeneID:100140180|LOC100140180:XM_002696830:635_cdna Constitutive 1 NULL GeneID:100140180 21 GENE LOC100140180 NULL hypothetical protein LOC100140180 EMBV3_15625 TTGTCAGGCTAGTCTTTGGATGGGAAGGGTAAAGCAGCTGACTGACGAGGAAGAGTGCTG Gene GeneID:539455|RNF141:NM_001040566:190_cdna Constitutive 0 NULL GeneID:539455 15 GENE RNF141 MGC134345 ring finger protein 141 EMBV3_06361 TGAGCAGATCAACCAGGTGGTGCTGGAGGCGTGGCTTCCCGGATCGCCTTCTTCCTCTGA Variant GeneID:534311|TOR2A:NM_001083476:160_cdna 660^960 2 EMBV3_26719 GeneID:534311 11 GENE TOR2A MGC140387 Torsin-2A torsin family 2, member A EMBV3_10285 TGTGCTGGAGCCACACACCCAAGCCACCCTATTACCTCCAATATTCCAGGGCCTTCTTCC Variant GeneID:785001|TMEM202:XM_002690532:569_cdna 351^650 1 EMBV3_05808 GeneID:785001 10 GENE TMEM202 NULL transmembrane protein 202 EMBV3_22641 GCATTGCAGGCAGACACTTTACAGTCTGAGCCATAAAGGAAGTCAACCTGGCTGTTACTG Gene BVT0102_017989 + 1 EMBV3_12431 GK000007.2:39812777-39834180 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04447 ATTCTCTGAAGGGATGGTCATGTAGCCAGAGGTCTTGAATCTGGTGGTCTCGCAGCTTTG Gene BVV0102_420273 + 0 NULL GK000030.2:55613134-55653683 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247007 TCONS_00247010 TCONS_00247008 TCONS_00091487 TCONS_00130106 TCONS_00247009 3 XLOC_151191 XLOC_056261 XLOC_078817 Coding TCONS_00247008 XLOC_151191 Coding Coding - X:55621803-55625619 - TSS185076 976 3 TCONS_00247008_1 47 0.0635245901639344 4 0.74521625163827 0 0 0 0 0 0 0 0 0 0.00041297811116091 0.000150808205220886 0.000302078234756207 0 7.53634939507695e-06 2.93658763335574e-06 1.47235574904295e-05 0 0 0 0 0 5.10816918235991e-06 0.000282030686216661 4.61121951747399e-05 0 0 0 5.07943275285076e-05 0.000108842440605389 0.00204182831201106 XR_231798.1 LOC101903074 PREDICTED: Bos taurus uncharacterized LOC101903074 (LOC101903074), 9e-141 504 90.79 0.373975409836066 0 coding 1 1 1 1 -0.0830668117434718 0.480614614876312 0.0193975619831445 0.745289161492005 CACTCACCTTACATTCTGGTGCTGAAACCTGGGAGGGAAGATCCACCGCAAGTGGTGGGCTCCTCTCACAGGCCCACCTCTGGTGGTCCCCTCCCTTGGATCTTGCTGAGAAACTGACATGAGATCCAGGACGGGACTCTCCACTTGCCTTGCCGGACTGACATCTACACACCGGCCCACATTTCATTGGTCAGTTACAACGACTTGATAACAGCTCCTGATGGCCTAAAACGGAACTCTTCTGTTTTTTTTGGAACTCTTGATTATAATACTCTACTGGACCTCGATAACTTCTGCCGCCAAATGGGATCCGGACATCTCCTTCTGGTGTCAAGCAGGAGTCTGCCAACCCAGCTCTGCCCAGCCTTCTGGGACTCGCCACTGAAGACTGAAGGTGCCCAGGGCCCCAGGCCCCAACTCTCATCACCTGTACGGAGCCCAGGATAACTCTTACAGTGGCAGGATGGTTTACAAGCCTTCACCAACCGAACTATCCAGGAACTACTTCTAACTCACTCAGATTATCAAAAACTTCGACTCCACACAAATCCCCTTGACCCACATTCCAGCCTTCTCTTATCTCACCCCCACAACACCCTTGTCCTTCAGGAAGAAGTTACAGAAGATTGACCTTCGACCGTTATCCTAAATCAAAAAAGGCTGGAATGATAGGGCCTACATGGAGTCTCATTGATAAGATGGCTCATTATGTCAACCTCACAAACAAAGAATAAAATCACAGAGATCCTTGAGACTGACCAAATTGCCCAAATTGTATCCTGTTTTCTCACTGGTGCCTATCTTCTCAAAGCTGCGAGACCACCAGATTCAAGACCTCTGGCTACATGACCATCCCTTCAGAGAATTTTTCATTGGTGGGGTATAAGAAGGACTCCGTCAGAAAGAGAGGACGCTGGTTCTCCTTAAGAGCCAGTCACCCTCTCTTTTCCCTCTAATAAATTTCCCTTTTCTCGCC TCONS_00247005 TCONS_00247006 s 5' 8671 TCONS_00247005 TCONS_00247006 s 5' 9184 EMBV3_16214 GCCCATATTAGCAAAGGAGGATCCCATTAGAGCTGAGGAAGAACTGAAAAAGATCCGTGG Gene GeneID:514554|PLD1:NM_001102001:19_cdna Constitutive 0 NULL GeneID:514554 1 GENE PLD1 MGC166213 phospholipase D1, phosphatidylcholine-specific EMBV3_12577 TTTGCCGGTTTCTGGCTCATCTGGGGTCTGATCGTCCTACTCTGCTGCTTTTGCAGCTTC Gene GeneID:538641|PRR7:XM_002689023:68_cdna Constitutive 0 NULL GeneID:538641 7 GENE PRR7 NULL proline rich 7 (synaptic) EMBV3_05208 ACAAGGCGCACCACATTCGGGAGCTCAACATCCTACGGGAGAAGAATCATCACATCCTGA Gene GeneID:539906|C16H1ORF65:NM_001076193:89_cdna Constitutive 0 NULL GeneID:539906 16 GENE C16H1ORF65 NULL chromosome 1 open reading frame 65 ortholog EMBV3_29458 AGCCAGCATTGTGGAGAAACGCTTTCCTGCCTTCGTGAGGGACTTCATGAGCACCATGTA Gene GeneID:505497|QTRT1:XM_002688843:165_cdna Constitutive 1 NULL GeneID:505497 7 GENE QTRT1 NULL queuine tRNA-ribosyltransferase 1 EMBV3_14973 ATCATGCATCCTTGGGTAGCCATCCTGGGCCTCCTATTCCTGCTAGATGGTGTAACCTCT Gene GeneID:100298064|LOC100298064:XM_002689335:2_cdna Constitutive 0 NULL GeneID:100298064 7 GENE LOC100298064 NULL similar to hepatitis A virus cellular receptor 1 EMBV3_42114 GGGACGATCATCCTGGGGACCTGGTACATGATAATGCCTGTGTTCTTTTTGCCGTCTCTG Variant GeneID:404135|LAPTM4A:NM_205799:48_cdna 235^355 1 EMBV3_15960 GeneID:404135 11 GENE LAPTM4A MGC128857 lysosomal protein transmembrane 4 alpha EMBV3_03304 ACACCTGGATGTGTCTCTGCTCTACAACTTCAGCCTGGTTCACTGCGGACTAATGATGCC Gene GeneID:100300332|LOC100300332:XM_002692915:165_cdna Constitutive 0 NULL GeneID:100300332 15 GENE LOC100300332 NULL hypothetical LOC100300332 EMBV3_02881 TACAGAAGTTGTTTAATGGTATGGGTGGCTGTTGCCCTGTGGTTTCTCAGCTTCAGGCCT Gene BVV0102_076832 - 0 NULL GK000017.2:56512896-56539012 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075604 TCONS_00075606 TCONS_00075608 TCONS_00075602 1 XLOC_046619 Coding TCONS_00075602 XLOC_046619 Coding Coding ATP2A2 17:56458506-56516191 j TSS56970 7848 1 TCONS_00075602_4 1042 0.0112130479102956 20 0.86429512516469 0.0043302951022426 0.0038081466776541 0.000973008749708814 0.0030034239470961 0.00129373025244958 0.000358015195445667 0.00027362107667347 0.00246570407635062 0.000912427083981328 3.7055298485723e-05 6.33801216028093e-13 1.90206007806572e-13 0.000127902248153463 0.000497188332291972 0.000163638119967972 0.00149018100071248 5.51292510847549e-07 0.00453397813914995 0.00129298362147491 0.00174348759519414 0.00149930744047439 1.96514292097795e-08 1.2192542316063e-07 9.68515157043227e-07 0.00358101302232753 0.00163247720601759 0.00248125306217211 0.00117419940298041 1.83712060107612e-09 1.36944829974247e-28 XM_005217906.1 ATP2A2 PREDICTED: Bos taurus ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 (ATP2A2), transcript variant X1, mRNA. 0.0 8395 100.00 0.593017329255861 NM_170665.3 ATP2A2 Homo sapiens ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 (ATP2A2), transcript variant b, mRNA. 0.0 6709 91.46 0.595438328236493 TCONS_00075602_4 sp|P16615|AT2A2_HUMAN AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 2; 0.0 2128 98.56 0.999040307101727 6 coding 0 0 0 0 -0.195139191101024 0.407355618947328 -0.0201642258224824 0.722138941647698 GCCGTCCCCGACGCCACCTCCTTCTCCTCCGCCGCAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCGCCCACCGTCCAGCTGTGCCCGGGGCGGGCACCGGCGAGGGCCGGACAGCGAGAGGGGCGGTTGTCTGGGGGAGGGGGCGCGGGGTGATTCAGCGCCCGACGAGGCGGAAGCGGCCGGAGGAGGAGAAGGAGGGGAAGAGACCAGTCCGCGCCTGGGCGCCCGGGGTGGCACGAGCCCGCGGCACGAGTGCGAGGCGGAGGCGAAGAGGCCGCGGGGACTGGAGGCGAGGCCGGCCGGGCCCCCGCAGCCATGGAGAACGCGCACACAAAGACGGTGGAGGAAGTGCTGGGCCACTTCGGCGTCAACGAGAGCACCGGCCTGAGCCTGGAGCAGGTCAAGAAGCTCAAGGAGAGATGGGGCTCCAACGAGTTACCGGCTGAAGAAGGAAAAACCTTGCTGGAACTTGTGATTGAGCAGTTTGAAGACTTACTAGTTAGAATTTTATTGTTGGCAGCATGTATATCTTTTGTTTTGGCTTGGTTTGAAGAAGGTGAAGAAACAATTACAGCTTTTGTAGAACCCTTTGTAATTTTACTTATATTAATAGCCAATGCAATTGTGGGTGTATGGCAGGAAAGAAATGCTGAAAATGCAATCGAAGCCCTTAAGGAATATGAGCCTGAAATGGGCAAAGTGTATCGACAAGATAGGAAGAGTGTACAGCGGATTAAAGCTAAAGACATAGTTCCTGGTGATATTGTAGAAATTGCTGTTGGTGACAAAGTTCCTGCTGATATAAGATTAACTTCCATCAAATCTACTACTCTAAGAGTTGACCAGTCAATTCTCACAGGTGAATCTGTCTCTGTCATCAAGCACACTGACCCTGTCCCTGACCCGCGGGCTGTCAATCAAGATAAGAAGAACATGCTCTTTTCTGGTACAAACATTGCTGCTGGCAAAGCGATGGGAGTGGTGGTGGCAACTGGAGTTAACACTGAAATTGGCAAGATCCGAGATGAGATGGTAGCAACAGAACAGGAGAGAACACCCCTCCAGCAGAAACTAGATGAGTTTGGGGAACAGCTGTCCAAAGTCATCTCCCTTATATGCATTGCGGTCTGGATCATAAACATTGGGCACTTCAATGACCCAGTTCATGGGGGCTCCTGGATCAGAGGTGCTATATACTACTTTAAGATTGCAGTAGCCCTGGCTGTAGCAGCCATTCCTGAAGGTCTGCCTGCTGTCATCACCACTTGCCTGGCGCTTGGAACTCGCAGAATGGCAAAGAAAAATGCCATTGTTCGAAGTCTCCCTTCCGTGGAAACCCTTGGTTGTACTTCTGTTATCTGCTCAGACAAGACGGGCACACTGACAACGAACCAGATGTCAGTCTGCAGGATGTTCATTCTGGACAAAGTTGAAGGTGATACCTGTTCCCTTAATGAGTTTACCATAACTGGATCAACATATGCACCTATTGGAGAAATACATAAAGATGATAAACCAGTGAAATGTCATCAGTATGATGGTCTTGTGGAACTGGCGACAATTTGTGCTCTCTGTAATGACTCTGCTTTGGATTACAATGAGGCAAAGGGTGTGTATGAAAAAGTTGGAGAAGCTACAGAGACTGCTCTCACCTGCCTGGTAGAGAAGATGAATGTATTTGATACTGAATTGAAGGGTCTTTCTAAAATAGAACGAGCAAATGCCTGCAACTCGGTCATTAAACAATTGATGAAAAAGGAATTTACTCTAGAGTTTTCACGTGATAGAAAATCAATGTCAGTTTATTGTACACCAAACAAACCAAGTCGGACATCAATGAGCAAAATGTTTGTGAAGGGTGCTCCTGAAGGTGTCATTGACAGGTGTACCCACATTCGAGTCGGAAGTACTAAAGTGCCCATGACTCCTGGAGTCAAGCAGAAGATCATGTCTGTCATTCGGGAATGGGGCAGTGGCAGTGACACACTGCGATGCCTGGCCTTGGCCACTCACGACAACCCACTAAGGAGAGAAGAAATGAACCTTGAGGACTCTGCCAACTTCATCAAATACGAGACCAATCTGACTTTCGTTGGCTGTGTGGGCATGCTGGACCCTCCGAGAATTGAAGTGGCCTCCTCTGTGAAGCTGTGCCGGCAGGCAGGCATCAGAGTCATCATGATCACGGGTGACAACAAGGGCACTGCTGTGGCCATCTGCCGCCGCATTGGCATCTTCAGGCAGGACGAGGACGTGACAGCCAAGGCCTTCACAGGTCGCGAGTTTGATGAGCTCAGTCCTTCAGCCCAGAGAGAAGCCTGCTTGAATGCTCGCTGTTTTGCTCGAGTTGAACCTTCCCACAAGTCTAAAATTGTAGAATTTCTTCAGTCGTTTGATGAGATTACAGCTATGACTGGAGACGGTGTAAATGATGCTCCTGCTCTGAAGAAATCTGAGATCGGCATTGCTATGGGCTCTGGCACCGCCGTAGCTAAAACAGCCTCTGAGATGGTCCTGGCTGATGACAACTTCTCCACCATTGTGGCTGCCGTGGAGGAAGGACGGGCCATATACAACAACATGAAGCAGTTCATCCGCTACCTCATCTCATCTAATGTCGGGGAGGTTGTCTGTATTTTCCTAACAGCAGCCCTTGGATTTCCTGAGGCTTTAATTCCTGTCCAGCTGCTCTGGGTCAATCTGGTGACAGATGGCCTGCCTGCCACTGCCCTGGGGTTCAACCCTCCTGATCTGGACATTATGAACAAACCACCCCGGAACCCAAAGGAACCACTGATCAGTGGGTGGCTCTTTTTCCGTTACCTGGCTATTGGCTGTTACGTTGGCGCTGCTACGGTGGGTGCTGCCGCGTGGTGGTTCATTGCTGCCGAGGGTGGTCCAAGAGTGTCCTTCTACCAGCTGAGTCATTTCCTACAGTGCAAAGAGGACAACCCGGACTTTGAAGGCGTGGATTGTGCGGTCTTTGAATCCCCATATCCAATGACAATGGCGCTCTCTGTTCTAGTAACTATAGAGATGTGCAACGCCCTCAACAGCTTGTCTGAAAACCAGTCCTTGCTGAGGATGCCCCCTTGGGAGAACATATGGCTCGTGGGCTCCATCTGCCTGTCGATGTCACTCCACTTCCTAATCCTTTACGTGGAACCCTTGCCACTTATTTTCCAGATCACACCGCTGAATGTGACCCAATGGCTGATGGTGCTGAAAATCTCCTTGCCTGTGATTCTAATGGATGAGACCCTCAAGTTTGTGGCCCGCAACTACCTAGAACCTGGTAAAGAGTGTGTGCAGCCTGCCACCAAACCCTGCTCGTTTTCGGCATGCACCGATGGGATCTCCTGGCCCTTTGTGCTGCTCATAATGCCCCTGGTGGTCTGGGTCTATAGCACAGACACTAACTTTAGTGATATGTTCTGGTCTTGACTGACAGTTTTGCATAAAGAAGATGTTTAACTTAATCAATTAATTTTTTATTGTTTAAAGCAACTGTCTATTTCTGCTGAACTTTCACATGAACATATTGGCTGGTGAAGGAAGTTTCATATTCTAGATTTTGTTTTGCTTTTTCTGACTTCAGTGGGGCAAGATTTTCCTTTTTTATACACATAATTAAAGTGTCCATTGACATGTACAGAGAACTAACACTATTTTATGCAAATATTTTTTTGTAGATGAAAAAAAGCATGTACAGTGTTCTGTTTAATACTCATCCTTGTAAAAAAAATAGTTGAGCCAGCAGACATTGTCAGCAAATTAATTGGCAGCAGATTTTAGGAAGTGAATGTGTGTGGTTTTTTTCTAAAACTAAATAGCATGTATTGTGTCTTTTGCATGATCATCTGGATTTAATCTGAGATCACAGTCTAATTTTTATTCATAAGCCAATTTTTCTGCACTGAGCAGAGTACTGCTACCTCAGTCAGTATTTTTTGGTTTGCCACCCCTCCACCCCTCAGCCCTGTGTTCACCTCCACCCCCACCCTGCTCGCTGCTTCTCCTGTAGGGTTTTGATGGTTCTGTTTACATCAGTCTTAACAAGAGGTATGCTTGTTCTCGCTTGTGCAGAAAACATTGTTCCAGATTCAATCGACTGGGTTCATGTCCCCTCACATAGTTTTTAAGGTTATTTATTTAAAGGTCTAATGTATTTTATTGTAACAGACATTGTTTTGCCAACATTGCCTATTTCAGTGGCACTTCACAATCTAGTTTAAAAAGAAAAATAAAACATTTTAAATGGACAGAGAAAAATAACCGTCTTGTTTTTAACTATTAAGTGGCTTAGTTCTCTTAGGTTCTTAGCTCAGAATTATTTACTGTGCTCGAGGGGAAGAAGGATCCTGTTCTGCTGCGTAGGTCATTGTAGGAATTTTATTTTTGGTGTATAGGCGCTAATTGTCATTTGTGATACATTTTTATGCAAGTTTCTGCTGGCCTATTTTAGCCTGGTGTAGAGGACATAAGGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTAAAATTTGTAAATAGCACATGACCAAATGAACATATTGTATAGAACTATTTTTATTTGAATGTGGCACTAACCACCACCATTGTTACTATGATAAATGTTTGCGCATGTTCGAGATCAGTCTTACCAACAGTGTATAAGTCATTAACAGTCCTAACTGTGGTGTTTTCCTCCAATGCCTTCCAACATCCATCAACTAACGTGAGTATTCCCTGGAATTTGGATGCTTTAGCCTAAAGGTGACTGCCACTAAATGAGCTGGCTGTATAAGACACTGATGAGTCAGGCACCCTGAGAGGAGCGGGTACACGATACATGGCACCTGTGGGCTGGAGTGGCTGCTCTAGATGCCACCCACTACCTTGGACAGCGGCACAGCCAGGTGTCAGGGAGGACCTGGGGGAAGACAGAGTAGTTCTGCTTTGGTCAGACTGACAGGTACCTTCACAAACGCTGAGATGCAGATCACAGGAAAACTTGTCAGCTTCTTTGATCTTTGTTAGCGGCAAGGACTGGTCCCAGAATCTTGCTACCTGGATCATTAAAAAGCAAAAAGCAAGCGAAAGCAAGTAACTGAACCAGTAAACTCATGCATCATTTTGTTCTCCCCACCCGGTCACACCACACAGCTTGCAGGATATTTTGAACTAGGGCTCCAGCAGTGAGAACAGAGTCCTAACCACTGGGTCACTGGGGAATTCCCTGGTTCATTTTTAAGTAGGCCATCTTTTTCTACCTTCTGGGTCATATCCTTTGTAGCTAAGACTTATCTTTTCTCTCCAGGGTACATTAAAGCAGTTACTAGACCACAGCCGAGCATTAGCCAAAGTGAAGGGCCTAGGCAGTACATATTCATGCTGGTAGCTCCCTCCGTGTGAAGCCCCTCGTGTTCTTGTGGGTACCTGAAGACCCGGATACAGGGCCAGCTGAATAACATGTAAATGCTGCGAGCATGAGGAAGGTTAACAGGTATCAAGCAGAACAGGGTGCTGCCAAAGTTTAAGAGGTTTCCGTGTACGGGGTAGAAAGGGCACATGGAGACGGATTCTTAACGCAGAGTCCTGGTCTGGCTCCCTGAGGCCTCAGAGGAAAGGGAAGCTGGTTTGCTTGGCAGAGACTATAGGAGGTACGTTTTGCCAACTTTAGCATTATGAATTGCAGAAAGAAACAAGTTGAGCAAATCAAATGCAAGGAGTGTGTCTTGGCTGCAAACCAAACCAGGATGTCTGAGCTTGTTGGGTGGGGTGCTATTCAATGGTCAACTTTTCCTGACTCAGTTCCTTGATGATTTATTGGCCTTTACAGAAGTTGTTTAATGGTATGGGTGGCTGTTGCCCTGTGGTTTCTCAGCTTCAGGCCTGTCCAATCCACAGGTGGTTTGGGCACCCACTTCCCTCAACCCAGACAGCTGGGAGTCAGGGAGACCTGGTGCTACAGAGCCCCTTAGCTGCTCTGCTTCAGGCTTTGCCACCAAAAACCATGTCCACACTGGCACCTCCTCAGTAGTTGGTGCTGCTGTGGGCACATCCCTGGCCCCTGAACTTGTGGGGAGCAGGAGGAGTCCAGCCATCCTCACCAGGTACCTGCAAGGAAGGCAGTGTCGGCCTCATCCTCCCTGCCCATGGACTCACAGGCAGCTCTTGCCTGAAACTTGCTCTAGGTTCTTTCCTATCAGCAAGTGGGCTGAAGGCCCATCCCCTCAGTGTTTTGGTTTTTGCCACCCCATACCCAGACTGACCTCTTTCCTTTGCCCAGGAAATAGCATTCTTACATGTTCCCTAAATGGGGTGCCATGCCAGCAACTCATTCTGCATCTCCATAGAGCAGGTGGCACGCTGGGTAGGAAGAGCTGCACGAGCTCAGACACAAGCAGGGCAACTGCCACCTTCCCTCACAAGTGGCTGCTTCCATTTACCTCAGACTGGGGCCCAGACCCCTGCATGTCCATGTGGTGGGCAGACCTCAGGAATATCTGAGACCACAAGCCTTAGCTCAGTGTCTGCCAGGCCTGCTGTGTTTGCAATGTGCATACAGCACACTGAAAAACCACCACCCGGCAGTTAACAATTGAGGGTAATCTGCAGCCTTTTTTCTTGAAAGGGAACAGTGATAAGCAGTTCCCCTTCAAGGACTGGGTCTGGCTGGGCCTGCAGCCCAGAGGCTGGTCCCGAGGGAAGGAAGGGATAGGAGCTAGAGGCTTGGCGCTGATTACCATACTGCTCACTCTGCTTGGCCTTCCTCACCCCCTGCACTGCTAACCAAGGACTTTCTCAACTTCTGTTAAACCTGAAGCGATTAAGTGTCTGCCTGGTGGGATACTCTGTAGCCAAATGACAGGAGGGGCCTGTGAGTTAATCAGAAATGCTGGTCTGAAATCTTAAAAGATCAAACTGAACATTCCTTTTCATCTGTCACTATTAATCCCAGTCTTAAATTAGTTATTCTAACATTTCCTCCCCATATTTCATAAAGCTGATTTCCTCTCTCTTTCCTTTTCAGCAATACTGGAGTAACCGCTTCCTAAACCATTTTGCAGAAATTTAAGGGTGTTCAGTTGCGTGCATGTGCGTTTTTTAGCAACACATCTACCAGCCCTCTGCATGATTGATGTTGGGGGAAAAAGAAAATTAGAAAAAAGTCCCCAACTTGTTGTGTGTTATGTGGAGGAAACGTGTATTACCAGTGGGGTTTTAGCTTTTGAATCAAAATAATAACAAATGTACAATTTAACTTAATGAATCAGAAAGCCTCTCCAGAGAAGTCTGGTTTCTTTGCTGCAAGAAGAATGAGGTTCTGAAACCTTATCCAAGAACTTAGAAGCCATCAGCCAAGTCTCCGTATTTCTCTGTGCAAAGTATCATAGCTTAAATAAATGTACAATATTCAATTGTAATGCATGCCTTCAGTTGTAAGTAGCCAGATTTCTCTATGGTGTCATTGAAACATGCTACTTTTTAATTGGCCCTGTACAGTTTGCTTATTTATAAATTTATTGAAAACACTGCAGGTGTTGAGTGGTTAAAAATGTAGGCTTCTAGTTCATAACTTCAGTTATTTTCCTGAGTGTGCAAACAGCTATTTTGCACTGTATTAAATGTAATTTATTTAATGAAATCAGAAGCAGTAGACAGATGTTGGTGCAATACAAATATTGTGATGCATTTATATCAATAAAATGCTAAACGTCAGTTTATCACAACGCATGTTTGACTTTAGGCTGTAAATAGAGATCAGTTTATTTCTGTGCTGGTAACAAGCATTGCACAGACATGGTTTCAGGTAAATAAATCTATTCTACGATAAGTTCACAG EMBV3_29940 CATGACTGAGTGACTAAACTGAACTGAATAACCACAGATGCAAGAGTATATGAAATTACA Gene BVV0102_041818 + 0 NULL GK000011.2:56531770-56639962 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18078 GGTCTGTGTCTTCGTCTTTGCCTTCGTCATCCCCGTCCTCATTATCATTGTCTGCTACAC Gene GeneID:540519|OPRK1:NM_001046480:50_cdna Constitutive 0 NULL GeneID:540519 14 GENE OPRK1 MGC137439 opioid receptor, kappa 1 EMBV3_33526 TTCAGTCCTGGCGAACTCACCATCCAACCATCTCTCAATGCCATCCTCATCCCTCCTCAC Gene GeneID:536561|GSK3A:NM_001102192:334_cdna Constitutive 0 NULL GeneID:536561 18 GENE GSK3A MGC159759 glycogen synthase kinase 3 alpha EMBV3_12190 ACCTTTATACCAGATCCGCTCTTTTTCTGATGGTTTTCTAAGGACCCTGCTGTTTACGCC Gene BVV0101_022332 + 0 NULL GK000010.2:30135195-30140589 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016637 TCONS_00016635 TCONS_00016638 TCONS_00016643 TCONS_00016633 TCONS_00016632 TCONS_00016640 TCONS_00016642 TCONS_00016641 TCONS_00016634 1 XLOC_008881 Coding TCONS_00016635 XLOC_008881 Coding Coding ARHGAP11A 10:30135634-30159877 j TSS11561 6376 1 TCONS_00016635_3 998 11 0.737439155185216 0.00184785719743232 0.00155439173370599 0.00142042324545752 0.00106643041861043 0.00144764250509765 0.00017965345243515 0.000188421285702689 0.000520620310493896 0.00159944400197042 7.40216545781478e-06 0.000221341259525347 0.000487270454168046 3.27212650978843e-07 0.000409738747813601 0.000458899654429726 0.00417171749658839 0.00179737361139661 0.00447593302875302 0.0025285066599147 0.00172456876436063 0.00144702944251695 0.00195002923606177 0.00130571625712721 0.000922460391262391 0.00230081595461288 0.000847567175027568 0.000534925726563093 0.00065340214011213 1.31895021600811e-06 0.000616340913064511 XM_005193635.1 ARHGAP11A PREDICTED: Bos taurus Rho GTPase activating protein 11A (ARHGAP11A), transcript variant X2, mRNA. 0.0 9322 100.00 0.810539523212045 NM_014783.3 ARHGAP11A Homo sapiens Rho GTPase activating protein 11A (ARHGAP11A), 0.0 2257 80.73 0.368099121706399 TCONS_00016635_3 sp|Q6P4F7|RHGBA_HUMAN RHGBA_HUMAN Rho GTPase-activating protein 11A; 0.0 1494 74.44 0.995991983967936 1 noncoding 0 0 0 0 0.00488707306448713 0.971932996590162 -0.00375232793650306 0.941709130327352 CCGGGACTGGGAGAGGCCTCTGAGCAGCCGGCTGGTCCGGTGGCTGGGCTAGGGTGGGGGGCGTGGGGTCGCAGGTATAGACGCTCAGCTGAGCCTGCTGGGGTCAGGAGGGCGAGAAGAAGGGTAGTCTTTACTATTCGGAGAGAGCCGAGGACAAAGGGAGGTTTGGAAGAGAGTGGCTGGAAGTAGTGAGAAGCTGGTAACAGGCGTGCTGCAAGGAACTGAAAGGATCTGAGAGAAAGAAGGGAAATCTGTGTAAGTAGCTGAAAGAATTAAGTGACAAGAAAGGCCAGTGAAAGTGAAGGAAAGGTGAGGGGTGGCACAGAGCTAAGAGAAGGGTCGGTGAAAGTGTATAGAGGATCGAGGAAAAAGCCGTGGAAGTGGCTGGGGTCCGGGGCCAGAAGAGTGTCAGACGGGGCCGGAAGGCAGCGGAGCTGAACGCAAAACTGAGAGTGTTTGGAAACTGGAAGACTTGGTGGCGAAAGAGGGCCAGGACTCAGATCGCACCTCGGAGAGTGAGCGACATGTCCGGGATGTGGGATCAGAGGCTGGTGCGTTTGGCGGTTGTACAGCAGCTTCGGGCTGCCTATGGAATTAAGGTCAAGGGTGGCCGTGCTCAGTGCGATCGCAGGAGACAGGAAACAGCAACCACGGAAATAGTGGGTAAAATATTTGGAGTACCACTAAATGCATTGCCCCAGTCCATTGTACCAGAATATGGACATATTCCAAGTTTCCTTGTTGATGCTTGCACGTCTTTAGAAGAGCATGTTCATACAGAAGGGCTTTTTAGGAAATCAGGATCTGTTATTCGTCTAAAAGCACTAAAGAATAAACTCGATCATGGTGAAAGATGCCTGTCTTCTGCACCTCCTTGTGATACCGCAGGACTTCTTAAGCAGTTTTTTAGGGAATTGCCAGAGCCCATTCTCCCAGCTGATTTGCATGAAGCACTTTTCAAAGCTCAACAATTAAAAACAGAGGAGAAGAATAAAGCTACATTGTTGCTCTCCTGTCTAATGGCTGACCACACAATTGATATATTAAGATACTTCTTTAACTTTCTCAGGAAAGTTTCTCTTAGGTCCAGTGAGAATAAGATGGATAGCAGCAATCTTGCTGTAATATTTGCACCAAATCTTCTTCAGACAAGTGAAGGACATGAAAAGATGTCTGCTAACACAGAAAAAAAGCTACGACTACAGGCTGCAGTAGTACAAACTTTTATTGATTATGCATCAGATATCGGGCATGTTCCAGATTTTATCCTAGAAAAGATACCAGCTATGTTGGGTATTGATGGTCTCTGTGCTACTCCATCACTAGAAGGCTTTGAAGAAGGCGATTATGAAACTCCTGGTGACTATAAGAGAAAACGAAGACAAAGTGTAGGAGCCCAGCTATCCGTTTCACCAACAATTCTTACACCAAATGCTAAGCGTAAACTGCCGGTAGATTCTCATGGTCTCTCAAGTAAGAAAAGGAAGTCCATCAAGCACAATTTTAACTTTGAGTTGTTGCCAAGTAATCTCTTCAGTAGCAGTTCTACACCAATATCAGTTCACTGTGATACAAGCCCGGAAGGGTCATCTCAGAGTTCATTCTCTCCTGTCGCCATCAGTGGAAACCATTTGATCAGTACAAATGTGCTAAGGCGAAGTAAAAGGCTTGCAAGCAAAAAGGTTTGCAGGGTGGAATCAGGAAAAGCAGGCTGCTTCTCTCCTAAAATCAGCCGTAAAGAAAAGGTTCGAAGATCTCTTCGTTTGAAATTTAATCTAGGGAAAAATAGCAAAGATGGAAATGAGTGTTCTGGTGTCAATAGATCTGAAAATGTTGGTCGACGACTTGCAAATCAACAAAGTTTAAAAAATAGGATTGACTCTGTAAAAACAGGTCTGCTTTTTAGTCCAGATACTGATGAAAGATTAACACAGAAAGGTTCGAAAAAGATCAGTAAGTCGGAGGAAAACTTATTAACTCCAGAGCAACTAAGTGGAACAAATTACCGGATATCTTGGATAGGACCTAGTAATTCTGATTTTCAAGAAGTAGATGGAAATGAAGCTTCTCCAATAGATGGAACTCTTGAGGTGGAGAACTCTTCTTTGGAGCCTGATATGATGGTTGAAAAGTCCCCTGTGAGCTCATCCGGGCTCACCCCTCCTAATGTACACAGTCAGCACAGTAACAACACAACTGGCAGCTCTCTTAGTGGTGATGAAAATAACTTGACCACAGAGACTGTGGTAAAAATTCAGAAAGCATTTTCTGAATCTGGAAGTAATCTTCATGCATTGATAAATCACAAGCAGTCATCATTAACTAATGTGGAGAAAGTAAAATTCAATGAAACATCTTCTACCAAAGGTAGCCCAGAGAAAAATCTCTTGAAAACTAATTTGACTGTGATAGAATCAAATGGACACCATACCAGTAACAATGAAGATAGCTTTTCAGAAAGAGACTTCTCACTACATCAGCCTCAAAAATCAGATAGAGAAGCCACTGTAAAATGTTACTCAACTCAGTTGAAGATACAACTAGAAAACAACATTCATTTCAATATACCAACAGATTATTTAAGCAAGCAGGAGTTGCCCAGTGATGAACATGTAAGGAAACAAGAGTCCCCAAGGGATACCCTCAATACTAAATTAAAGGAGAATGAAAATTTGATTGAAGAGAACTTACTGAAACACACAGCTTCTAGGGAGGTTGTGGCTAGCACCTCTTCCTTGGGACAGAGCACGTGCAGTAGCACAAACTTGTCAAAACCTAGTCCTGGGGGAATCATTAAACAGCAGTCACCAGTGGAGACACGTGATGAAACGGTTTCTGAATGTTTACAAATGACAAAACATGGAAGGGTTTCAGACCACATACAGTGGTTTAACAATCTGTCTTTAAATGAACCAAATAGGACAAAAGTTAAGTCACCTCTTAAGTTTCAGCGTACGCCTGTCCGTCAGTCAGTGAGAAGAATCAGTTCTTTGTTGGAGTATGGTGGACAACCTCCAAGGCGTAAATTAGCAAGTCTTGGTGATACTGCTTCTCCTCTGGTTAAATCAGTGAGCTGTGAGAGTGCTCTTCCCTCTTGTGTAGAAAGTATGACAAAAGATTCCTCCCATCCATGTACCAGATCAGGTCCTAAAGAACAGAAGTCTTCATCTTGCAAGCAGTCAAATATTGATATGATTTCAAAATCAAGCATGGAGGTAACTTCTACATCTTTCTTACAAATGAAGAGGCACCCAAACTCTGTGAATGCTTCTCTTGGGTCCACCAGAGTTTGTAAACAAGAAGTGATATCTAATAGCCAAATTAAGGTTCCCTTGGATGATCTAACAAACCATGATATAGTAAAATCTATTGTAAGTAATGATAAGGTCTTTCCCCCTGGCGTAAACAGCAGGGTCCTTAGAAAACCATCAGAAAAAGAGCGGATCTGGTATAAAGGTTCTCCCAAAAATCCTATTGGAAAACTTCAACTACTACCAACAAGTAAACCTGTAGACTTATAGTTGGTAAATGTTGTACTCATCATTAACGTATATAAAATTATCAATTGGTGATATGACTTGCAAGGTAATTGATGTGTTTGTAGCTCAGGATGATTGTTATGTGATGAATTTAATTTCATTGCACAAGCAACTTGAATTCTTATTTTTCTTAATTATGGCAATATTTAAGCTGTCTTTAATTTTATTGTGATCTCTTAAAGCAGAGGTTACACTTAACTTTTTTAAAGAAATTGTTGACTGGGTTTATAAGACGTTAATTTTTGAGAATTGGATGAATTTTATTTTTTAACGTGTGATAGAATGGAATGAGTCGTGCTGATTTCTTGTTACTCCTAGGCCAGATGAGGTTTCTCCAAGAAATCTTAACACATAGAGGGAGAGATAAGCCCTGCAGATCTTATTTCTCAAATTCCATTAATGTTCAGTGTCTTTAAAAATCCCTAGAAATTAATTTTCTTCAATAGCATTTTAATCCTTTGTTCCTTTTGGGTGTAATTAGGTTTATATTGCCTATAGATGTGACAGTGTGTTCCCTTGAACTAAGAATAATGGCCGATGCAGAATGACGATGACTCAAGTGTGCTGATATAGTATGAGGCTGCAGAAATAACAGATGACTTTTAAGCCATACTATATTTTTAAAGTTAATTTGCACAAATACAATTGTATCTGTTTTGTCCGATATAGAATTTAAAAATTTTTAAGGAGTAATTAAGCTTGGGAGATTTTAATCAAAGTGATTGCTTGTATGCAGATGCTTGGTTTTAGACTTTGTAGTAATTGATGCGCCTCTGTACATTTACCTTGGATTCTTAAAAGAACCTGTGATAGTTTGTCATGTGTGTAAATGTTATTTATTTAGCATAGACATTAAAGATAACTTTCTGGAAAATGACTTGCCTGAGACTCTAATGAAATTCAAAGTACCTTTTAGAATTTGATCCAGATTGTCAAGCTAATCTAATTATTAGAAATAACAAAGTTTTAAGGACAGAATACTATCAACAGTAGAGTGTATTTAAGTTTTAGAAGAAGGAATAGGTGTGCAGAATCCATCACTAAAGATAGTTTTGCAGGCCAGGTGTTAGCATGCCTCATTCAAAGGCGAGGGCAGGACAGAACCACACTGCACACCACGCAACAACCAGGCAGTGTGAGTATGTGGGAGGAACTGAAAGTCATCAGAGGTTTGCTTTACCAAGTCCTCCTTGATAGCGGTACATCTTATTTAAAAGCTATTTCCTATTTCTATAATCACTACCTAGGAATTGACCCTTTCTCAGAATTAGGAAGTATTACTTATTATATATAAAGACTAAAATCTACAGATAGAAACATCATGTTTATCTGACATCAAAACAGGTTTTTAATACAGGTATGCCTTTCTGTTGATGGTATTTCTAATAGTAAATGGATATAGAAAATATTCATAAATTCTGAGATGTTTGTTGCTGCAAGCAGTTTTTTTAAACTTTATTTTAAAAATGTATTAATGTCCTTTGATTTCCATGGGAGTAGGTGAAATGTTGAATTGGAAGCCTAATTCAGTAAGAAGACAAGAAATTAACTGTACAAATCACCTGGATCAGTGGATTTTCTAAGAGACTAATCATTAATAATAAAAGATGTTTATTAAGGAAAAAAACTACCCACATGTCACTCCGTTTTTTGTTAGCTGAAAGCTGCAGTGCAGAGTAAAGGATTATGAAGGTGCAAAGCTTGGAGATGTGGGAACTGGAGAGTTGGGAAAGTTGAGTTTTAGACTTGATTTCGTATTCATGTTTTCATTTTTTCTTATACAATATAGAGATAATATTTTTAACCTCATGGGGATATTTAATCATATGATATACAAACATACTTAAAAGTCTGGGCATGTGCAGTAACTCCAAAAACTATTTTCATTTTATTCTTACAAGTAAATAAAAATCTAGTATTAATTTGGTTATTATGGGCAACAAACAACACAGTTATGCATAGAACTTAATAGATAGCAACATTCTAAAATCACTAAAAATTTTTGATACAAGATTTTGAAAATCATCAAGCCCAGGATGTACAATGTTTTGTTTTTAGAATATAAAATTTCACATGAAGCATAAACAGTGTAGTTTGGTCAGATTTCCATTCAACACAAAGGCAGTCAATTATAATGGCATTTCTGTTTTTCCAGGCACAAAATGAAGATAATAGTGAAATAGTAAAGTAAAATTTAGAATTGGAAAAAGCCCTCATCATGTGTGAATAATAAATATTAAACTCCAGCATGGTCTTTAAGCCTAGAACCAATGGACAATATATTTGTTATTTTGTATTGTTAGCATCCACTGAAATAAAAAGCTGGAAGCATAAGAGCATCCACAGAAGAAAAGGTGCTAGGAAGGAGGTTGGCTTCAAACTAAAAGGTCATGGATGAATTTTGCAGGCCCCCTCTTCATTGCGTAAAATTGCTGTAGATGATAATGGATTTGGGGACAGAACAAGGATACGGAATTCTGGATTCTAACCTCATCAGGGTATTCACTCTGGGATCTCCAAGTACTTTACTCATCCCCAGTCTTGATGAAAGAAATTGAAATACTTATATTCATCCTATGGTTTTACATTTCAATTCTTGTGTTTGAAAAGAATAAAAATGGATACATTTTCCAATGTGCAGAGAGTATGATTTCTCTTCAGGCAAAAGAAATCTTACTTGATAGCTGGTGTGGAAGTTTAGAAATAACAATCAGAACTAATAGTCCTAGAGGTTTTCATGTGGTTTTGGTTTATCACTTTAACAGAAATTTAGAGTATCTTGTATTAAATATCTCCAAAGTTTTCCTGCTCAATGAAAAGTCTTCTGAAAGCACTCA EMBV3_00208 CTGTAAGAAAGGAACGGGGTTCTTCAGGCTCCCAAAGCAGCACCCAAAGGTGATATGTGT Gene GeneID:616646|CLEC4D:XM_002687850:217_cdna Constitutive 0 NULL GeneID:616646 5 GENE CLEC4D NULL C-type lectin domain family 4, member D EMBV3_34750 GAAGGATTCTTAGCGGTGTAGATAGGTGATATTGGGATGGAAAATGCTAATCAACTCCCC Gene GeneID:538540|CLINT1:NM_001105417:17_cdna Constitutive 2 NULL GeneID:538540 7 GENE CLINT1 MGC159872 clathrin interactor 1 EMBV3_29481 CAGAAAAGGGACCAGGGAAGCTTTATAAGGAAGACAAGAATATCCTCCTCAGTGCATGCC Gene GeneID:100336740|LOC100336740:XM_002694095:369_cdna Constitutive 0 NULL GeneID:100336740 16 GENE LOC100336740 NULL heat shock 70kDa protein 5-like EMBV3_14126 TGATGCCTTCTATGGAGTCCTCAACTTCCTGCTCACCCTGGTGTCCTATGGCTGCATTGT Gene GeneID:528422|LOC528422:XM_002698590:202_cdna Constitutive 0 NULL GeneID:528422 26 GENE LOC528422 NULL similar to rCG48404 EMBV3_38008 AAGCAGGACTGTGTGCTGTTGCTCAGTACGGTCGTTCTGGGGTTGGAGTTTTCCCCTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16433 GAAGCACTCTGCCATTCAGGTGTGGACAAGTGGTAGTGAGCATTCCTCCTTCAGCATTAA Gene GeneID:538639|NLRP3:NM_001102219:11_cdna Constitutive 0 NULL GeneID:538639 7 GENE NLRP3 MGC159873 NLR family, pyrin domain containing 3 EMBV3_26692 GGACCCTGCTGAGTGAGCTGCTTCGCATGTACACCGCTCTCCATCCTAATAACATGCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08313 ATGAAGGAGCTGGAGCGGCAGCAGAAGGAGGCGTCTGATGAAGATGAGCGCATGTCAGTG Variant GeneID:616994|LRRFIP1:NM_001102308:17_cdna 277^387 2 EMBV3_30536 GeneID:616994 3 GENE LRRFIP1 MGC151609 leucine rich repeat (in FLII) interacting protein 1 EMBV3_01391 TTCTGACCTGGAGGAGTTGGCAGTGGGTAGACTTATTTTAGTACCTTACAGCCTCCTTCC Gene BVT0101_024027 + 0 NULL GK000026.2:11111042-11117505 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149991 TCONS_00149993 1 XLOC_091789 Coding TCONS_00149993 XLOC_091789 Coding Coding IFIT1 26:11105137-11113870 j TSS112482 5275 1 TCONS_00149993_4 478 0.193175355450237 2 0.396129180027485 5.31086750080323e-05 8.88465348017086e-05 4.56484843428752e-05 5.50919728362085e-05 7.06487083274626e-05 3.38762676880849e-06 0.000443965147961002 0.000204986827465767 1.78822195954756e-10 0.000234673516468291 2.12626736147434e-05 0.000299271467481481 0.000252550150681664 8.52769362628857e-06 8.47735137650761e-05 0.0056838020360472 0.000413066806854587 0.000351966523894257 2.0497397332795e-05 1.16339512464467e-10 6.31058298447306e-06 0.00230012250530046 0.000897722896445367 0.00511130626061356 4.4727915193463e-08 0.000306737713043022 0.000190505593999895 1.50471495185322e-05 5.78521778754634e-05 4.39617921043729e-05 XR_240144.1 LOC100139000 PREDICTED: Bos taurus eukaryotic translation initiation factor 4E-like (LOC100139000), misc_RNA. 0.0 5375 99.97 0.565308056872038 NM_001130679.1 EIF4E Homo sapiens eukaryotic translation initiation factor 4E (EIF4E), 0.0 1451 88.26 0.214597156398104 TCONS_00149993_4 sp|P09914|IFIT1_HUMAN IFIT1_HUMAN Interferon-induced protein with tetratricopeptide repeats 1; 0.0 658 66.67 0.98744769874477 12 coding 0 0 0 0 -0.0277390691241217 0.801223136897772 -0.00313708065398005 0.948186847109244 ATGCTTATCAAGTGCCAGCCTGGCTTCCAAAGTATTATGTAAATTATTACATTTACAAAAGAAACTTATGAGTTATAAAGCTGATGAGGATCAGCTCAAGGATAAGCTGCTACTGTTGAGATGTCACTTTACATGGGATATGATCATTGCAGAGACAGAAATACCGGATTTAGAAAACAGGGTCTTGGAGGAGATTATGTTCCTGGACATCAAATACAATGTGGGAATATACAACTTACTGGCCTATGTGAAACACCTGAGAGGCCAGAATGAAGAAGCCCTGAAGAGTTTACAAAAAGCTGAAGACTTAAGCCAGCAAGAACATGCCAACCAATCAGAAGTGAGAAGTCTGGTTACCTGGGGCAACTATGCCTGGCTGCATTACCATATGGGCCAACAGGCAGAAGCCCAGATTTACCTGGACAAGGTGAAGAACACTTGCAGGAAACTTGGGAATTCCTCCAGCTATAGAATGGCATGTCCTCAGATGGACTGTGAGGAAGGATGGGCCTTGCTGAAATGTGGAGGAAAGAATTATGAACGGGCCAAAGTCTGCTTTGAAAAGGCTCTGGAAGTGGACCCTGAAAACCCCGAATTCAGCACTGGGTATGCAATCGTTGTCTATCGCCTGGAGGGCTTTAACAAAGCACAGATTAGTGCGGAATTTTGTCTGAACACCTTAAAACAGGCTGTCAAGCTAAATCCAAATGATGCATACATTAAGGCTCTTCTTGGCCTGAAGCTTCAAGATGTAGAACAAGAAGCTGAAGGAGAAAAGTACATCAAAGAAGCACTGACCAATGCGTCCTCAAAGGCTTATGTCTTTCGGTATGCTGCCAAGTTTTACCGAAGAAAAGGCGTTCTGGATGAAGCTCTTCGGCTCTCAAAATTGGCCTTGGAGGAAACCCCCTCTTCTGCTTTCCTGCATCACCAGACAGGGCTTTGCTACAAGTCACAAATAAGCCAAATAAAGTTCGCTACAAACTGTCAGCCTAAAGGACAGGATAAAGAAAACATCAACAGAATAATACCATTAGCCATACATCATTTGGAACGTGCTGTGCAACTAAAGCCCACATTTGAGTTAGCTTATACAAGCCTGGCAGAAATGTACGCAGAAGCAGGTGACCACAGAAAAGCTGATGATACTTTTCAAAAAGTGCTCTGCATGAAAGCACTCGACAAAGAAGTGCTGCAACACATACATTTGCACTACGGCCGATTTCTGGAATTTCACAAAAAATCTGAAGTCGATGCAATTAGCCATTATTTAAAAGCAATAAAAATACAAAGCCCATCAACAGATAGGGATAAAAGCATCAATTCTTTGACGAAATTGGCTTCAAAGAAACTCCGGAGAAATCCATCAGATATAGAAAGCTTGAGTATCCTTGGGTTCATCCACAAAGTAAAAGGAGAAATGAATGAAGCCCTGGAGTATTATGAGCGGGCCCTGAGGCTGGCTCCTGGCTTGGAGAACTCTGCTGTGATCCCTAGGCACTGAAATACGGAATCATCTTTTCTGCTTGTGACTTTCAGAAACGCATTATGTAACTCACCACAATGCTGTAATCTTTGAACAATTACTCAAACCTGATAAAACATTAGTTGTATTCAGAAAATAGGGAAACAGCCTTCAGGAGCGACTGTGCGATCAGATCGATCTAAGACGGCGACTGTAGAACCGGAAACCACCCCTATTCCCAATCCCCCGCCTACAGAAGAGAAGACAGAATCTAATCAGGAGGTCACTAACCCAGAACACTGGATTAAATAAACACCCTTTACAGAACAGATGGGCACTCTGGTTTTTTAAAAATGATAAAGGCAAAACTTGGCAAGCAAACCTTCGATTGACCTCTAAGTTTGATACTATTGAAGACTTCTGGGCTCTGTACAACCATATCCAGTTATCTAGTAATTTAATGACTGGCTGTGACTACTCACTTTTTAAGGATGGTATTGAGCCTATGTGGGAAGATGAGAAAAACAAACGAGGACAATGGCTAATTACACTGAACAAACAGCAGAGACGAAGTGACCTCGATGTTTTTTGGCTAGAGACACTGCTGTGCCTTATTGGAGAATCTTTTGATGACTACAGTGATGATGTATGTGGAGTTGTTGTTAATATTAGAGCTAACGGTGATAAGACATGGACACGAGTTTGAGTAAACTCTGCAAGGTAGTGATGATCAGGGAGGCCTGGCGTGCTGCAGTTCATGGTGTTGAAAAGAGTCGGACCGACTAAACGACTGAACTGAACTGAAAGGTGATAAAATAGCAATATGGACTACTGAATGTGAAAACAGAGAAACTGTTAGACATATAGGGAGGGTATACAAGGAAAAGTTAGGACTTCCTCCAAAAATAGTAACTGGTTATCAGTCCCATGCAGACACAGCTACTAAGCAGCTCCACCACTAAAAATAGGTTTGTTGTTTAAGAAGACACCTTCTGAGTATTCTCATAGGCAACTGCCTCAAGCAATCAAGATTTGGGAGCTGAAGGAATGCCTCTTCAAAAGCAGAATGGACTGCATTTAAATTTGAGTTCCATCTAAATGTTGCTAAGATAAAAGGAAGTTTCATTAGCCTTTGTCTTGTACTTCTGTATTCATATTTTCTTTTTTTTTTTTAGCTAGAGTGTCCATTATCCCAATCAAAGTATTACAGTACACATCATATCATCCCCAGAATCCATACATGTGTTCCTGGCCCACTTTGTAATAGCTTAATAGAATTAACCATTACAAAAACATTTGACCCATCTACAATATTAAAAAAAGAACTTGCATTTCTATACCTTACAGGAGAATGATTTTGCTTACATTCCTTTATATGAAGGAGCGTATTTTGCTGGTTTGAAAGAGTATAATGCATAGTTTTCTGGCAATTTTCTTTGTTTCTTTTTACAGCATTATCTGTCCTGTACTCTTGCTGATGGCTGCTAGATTTTATTTGCTTCCCTACTTGATAACATTAGTGATTCCGATTTCAGTTTTTCATGTGTTTTGGTTTAGTTTTTCTTTCTCATGTAACATTGGTGAAGAATCTAGGAATATGACATAAAGGTAGAATAAACAGTAGTTTTGTGCATTCTTTGGTAATTTTTTTTGTAACTACAATGCTTTGCTACAAATTTATGCTTTTCATTCAAATCACTGATCTATGTTTGTGTGATTTCCTAAACTTAATTGTGTATTATAAAAAATATAGTATCATAATTACATTCCTAATTAGAATTAGTATGTCTGTTTTTGTATCTTTACGCTGTACTTTAACACTTTGTATTACTTAGGTTATTTTGCTTTAAAAATTGCCTCAAGTAGAAAAGCAATCCCACTCATATTAAGACAGTGTACAAAACTGTAAATAAAATGTGTTCAGTGAGTTGTCTTTAAAAAAAAAAAGAGTCAATCAGAACATACATGCCTCTACATGTGAGAGAGAGAGAAGAGAGAGAAGAACCATTTCTCTGTGAATGTTATAGAGTAGGGAAAAAAAGAAAACAAATAGTAGTTTGTTGAGTAGATTTAAAGCAAAAAAAAAAACAACACTGGACTTACATAAAATAAAATGTTCAATTCATTCACTTTATCAATAAATAGCTTTCAGTGCTAGATACCAAAAGTACTAGGGTGAAGGAGCGAAGAGAAGGTTCTTTCAGCTCTACCCATCTTAGGGTTACTGGCTACAGCCTGAAATTAAACTGTCAAAAGACAGATTAACAAGAGAACAACCAGTTTATTAACACATGCATCAGGCATATACATGAGTACCCAGTGATGGGTAACTCAAAGGTGTGACCAGAATGTGGGCTTATATAGCATCCTAACAACCAAATGATACATTTTTAGAGAAATGATAAGGCAAAGGCAAAGAACTTCAAATTTCTGAGTCGCAAATTGTATGAAGGCAAATATCGGGGAAACTAATGGAAAGTAAGAGTTTGCCTATAAGGTTTGTTACATGTGTCTTTCTGTCAGTGTCTCTGGGCTGTTTAGGGACTAGAGCTGTCTCAGGTGATTAACTTCTGTCCTTCCTGGTAGAGAGAGGAGAGACATTATTTTCCAGGCAGATGGGGGAGAACAGAGAGCTTTTCTTATATCTGCTTCTTTTCAATTGCCTTCAGCTCAAAATAACCCTTATGGCAAGGTGGCATATTTGGGGATGGCATATTCTGCTACCCCTCAGTGAACAAAGCAGACATTTTCCTCCAAACCTCAAGCAGCTTACCATCTAGTGAGAGAGACAGACAGGAAAACAAATACATAGTCAAAAAAAAGAAAAAAACAAATACATAGTCAATGAAAGGTCAGTTTTCTACATGAAGATGTTTGAAATGTAATTCATTGTCAAATTGTTCCAAGCAATTTCTATTGCTTTATGCCATTTTGCTCGAAGCACTATTGATTCAGTCATTTGCTAGCACTGATTTAGTTAGATGAATAAATAGGAAAAGGATGCTAAAGAGTCTGAGAGACCATCTGTAGCAATCACCTTTGATTATAACATTTTGTTAAAAGACAATGCCCTATAAATAACATTTTTAAAAGGAAAATTAAGGAAACAATGTCATTGTTTTTTCATTCTTGTCCGTCTTTGGGGGGAAGATGTATGCATTCCTATTGTGGCTCTCTAATAAATTACCATGAACTGGGTGGCTTAAAATCACACTCATTTATTATCTTACAGTTCTAGAGGCTAGAAGCCTGAAATGGGTTTCACTGGCCTGAAATCAAGGTGTTGGCACATCCAAATCCCTTCTGGAAGCCCTAGGAGACAATCCTTGTGGTACCTTTTCCACATTCTGGAGGCTGCCTGTGTTTCCTGGTGGGAATCCTAAATCCACAGAAAAGACAAGTCCCCAAGGAATTCACAGACCTACTGGACAAGGCTTTGGATTTCTACTGAAATTCTATAGGAACTGAAGTGAGTAAGGTTTGTATCAGGAGCAGGCCTGAGAGTTACAGAGAAGCAATCTTCACAATTTCCGTATCACTAAAACTAGAGGTTTATTAGATTAACAAAAACATGACTTAAAGCGCTTGTGTTTGAGGAAGGAGGCTGTAAGGTACTAAAATAAGTCTACCCACTGCCAACTCCTCCAGGTCAGAAATATGAAAATCAAATAGTTATTGGATAAGTGTCAATTCTTGAATGGCTAACTCTTCTCCAATATTGTTATACACCATCTGTACCCAGAAAGCAGAGCTCATTAAGGCAAAATAAATCTCTGGATTATGCAATGTGTTTGTGTGATGTGTTTGACA EMBV3_27169 TAGGCACATACAGAAGAGGCTCTACTCTGGTATGCCCGGGCCTCCACCGTGCTCTCCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03872 GGTAGGTTCTTCACAACTGAGCCACCAGGGAAGCCCATTAGGTACTGTTTTTTAACCCTC Gene BVV0102_039180 + 0 NULL GK000016.2:42767966-42806427 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30851 GATACAGTAGTGAAGCATCAGTAGATGAAGGATGTGTCAGCTCAAGGATCGTCTTCACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26383 TACACGGAGACAAAGATCTTACAAGAGAGAGAACGGAAAGAACTTGGTAGACTTTACCTT Variant GeneID:616694|NSDHL:NM_001035482:112_cdna 624^766 1 EMBV3_18170 GeneID:616694 X GENE NSDHL MGC127609 NAD(P) dependent steroid dehydrogenase-like EMBV3_32990 ACAGTTGCCCCGTCCTAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCGGCGATTCC Gene GeneID:615572|MID1IP1:NM_001076383:49_cdna Constitutive 0 NULL GeneID:615572 X GENE MID1IP1 MGC139575 MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish)) EMBV3_37826 AAAAGAGCTAAACTCATTTTATTAGTTGAGGATGTTAAAACATACTTTATATTACTTGGT Gene GeneID:531339|HPCAL4:NM_001099382:209_cdna Constitutive 1 NULL GeneID:531339 3 GENE HPCAL4 NULL hippocalcin like 4 EMBV3_23026 GAAGGGAACCTGGAACAGGCCAATGAGGAGCTGCGGGCCATCATCAAGAAGATCTGGAAA Gene GeneID:408015|caV1.2:XM_002687917:94_cdna Constitutive 0 NULL GeneID:408015 5 GENE caV1.2 NULL voltage-gated calcium channel alpha 1C subunit EMBV3_11786 TTCGAAGGAGTGACCGCCATCATCTTCTGTGTGGCGCTGAGTGACTATGACCTGGTTCTA Gene GeneID:281790|GNAI1:NM_174324:5_cdna UTR3_Alt 2 NULL GeneID:281790 4 GENE GNAI1 MGC128528 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 EMBV3_18636 ATCCAGGCCATTGTCACCTCATCCCAATTTCGCAGGAATGCTAGGTTGCCGGTTGGAAGT Gene BVT0102_218389 + 0 NULL GK000009.2:88256960-88262038 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25930 ACTGGTAACGCCTGGAGTTCAAGAGCAGAGTAAATGACAGGTTTGTGGAGAGGCCACAAC Gene GeneID:540599|MEAF6:NM_001024572:280_cdna UTR3_Alt 3 NULL GeneID:540599 3 GENE MEAF6 C1orf149 C3H1orf149 FLJ11730 MYST/Esa1-associated factor 6 EMBV3_37467 CTGCGTACAACGAGGAATGAGGAATTTAAGGCGAGCCCAGCTCAGGTGGAATGTTCAAGT Gene BVV0102_310786 + 1 EMBV3_19180 GK000005.2:1321240-1361979 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193821 1 XLOC_117599 NonCoding TCONS_00193821 XLOC_117599 NonCoding NonCoding - 5:1361121-1361799 - TSS144777 590 1 TCONS_00193821_1 86 0.305084745762712 2 0.131462333825702 0 0 0 0 0 0 0 0.000120299275152884 4.01194129171791e-05 0 0 0 0 0 0 0 0 0 0 0 1.02905727099273e-05 0 0 8.52438625544291e-05 0.00051669888435957 0 1.98615533326948e-05 0 2.46844377800924e-05 0 0 noncoding 0 0 0 0 0.0747056883811401 0.596493125157233 0.0268214087530427 0.586750657614948 GCGGGCCGCCACATCTCTGCAGCTGGTGGGAGCCTGCGTACAACGAGGAATGAGGAATTTAAGGCGAGCCCAGCTCAGGTGGAATGTTCAAGTACACAATGTTCTCGTTCTTGCCCAGGGGATGTTCAGAGGCTAATGACCTCTCCCTTCCGGAGGTCCCGTTCTCCAGACCACCTGGACTCCTCCTTAAATTTCAGTGTCTCACCTTAAACCAGAAGGTTTCCTGGATCATCCCATCTTTTTCCCTGTCATTTCATCTCTCTCCCCACCGGTGTATCTTCTCTAGCCCAGCTTACCATACTTCGTGGAAATTACCATGTTCAATATTTGTCTTTCCTTATTAGGCTGTAGACTTCTTAAAGACAAGAACTGTGTGAGACTTGCCCACCCTTGAGTTTCTGACCTCAGGTGCCAGACACATTATTAGTATTCTATAAGTATTTGGGGAAGGAATGAATAAATTGTACCTCTCAGGCAGTTATGCCTTGGTTTCCCATTTTTTGCTGTCTTTCATGAAGCTTTTTCCACCATGAAACTTTTGACATTCCATGTTGACTCCGCCTTGACAAGCTTGTCTGATTTGATGATTT TCONS_00190712 r 5' 367 TCONS_00190712 r 5' 118 EMBV3_01754 GCTGCTGGAGCTCTTTGACCTTGTCAGATACTTTGTTCATCGGGAAATCTATCCAGGCAG Gene GeneID:613626|MDP-1:NM_001037486:258_cdna Constitutive 3 NULL GeneID:613626 10 GENE MDP-1 MGC133592 magnesium-dependent phosphatase 1 EMBV3_33787 CATCTGATTGATCTCACCGGCCTGTCCTGAGCACACCTCGCTGCTCTCACGTTTCTGAAT Gene GeneID:537453|PATL1:XM_002693813:60_cdna UTR3_Alt 2 NULL GeneID:537453 15 GENE PATL1 FLJ36874 protein associated with topoisomerase II homolog 1 (yeast) EMBV3_32512 CATGGATCCCAATGCCCTGTATAGCCTGTCCCTACTGACCCCCTCCAATTGTGTCTCCCA Gene BVT0102_188512 + 1 EMBV3_13847 GK000007.2:8651747-8701375 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04785 CGCATCCAGGCGGAGTTCCATGTGCTATACAGTAGGTCCTTGTGGGTTATCCGTCTTAAA Gene BVV0102_266623 - 0 NULL GK000015.2:82081167-82099120 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066314 1 XLOC_041028 NonCoding TCONS_00066314 XLOC_041028 NonCoding NonCoding - 15:82092145-82093221 - TSS50057 1076 2 TCONS_00066314_4 111 0.752788104089219 1 0 1.26446972896375e-05 0 0 7.71761326885637e-06 0 0 4.33584655657556e-05 0 0 0.000103244330140465 2.1274964795329e-06 4.98467703694309e-05 2.39995652652998e-05 1.31151802771858e-05 0 0.000245460805434698 0 0.00307806536683835 0 0 0 0.0010413772888905 0.000127890968923882 3.11610087253561e-05 1.28782096232515e-05 0 0 3.57069854719006e-05 0.000144374910530466 3.91130805642935e-05 XM_005200075.1 ZBED1 PREDICTED: Bos taurus zinc finger, BED-type containing 1 (ZBED1), 6e-61 239 73.96 0.336431226765799 0 noncoding 0 0 0 0 0.201127246537138 0.333270889413374 -0.0567022990629988 0.244775911381524 ATGGCTTAAAGCAACCTTTATTATCTCGGCTTCCTAGGCTGGGAGTCAGGGTGCAGGTCCATTCAGTCCTCTGCTTCAGGGGCTCTCACAGGGCTGCAAAGTGCCAGCCAGAGCTGGTGTCATCTGATACAGGAGAAGGACCTGCATCCCAGCTCACTCGGGTGGGTGCTGGCGGGATTCAGTTCCGCGCTGACTGTGCGCCGGAGGCTGCCTGAGGTCCTCACCATGCGGGTCTCTTCCTAGGGCAGCTGACAACATGGAAGCCCGCCTCCTGAGGGTTTCCAAGTGAGAGGAGAGGGGATGGTGGGGGCAAGAGGAACGCTACAGGGACGGCCATTACGCTCTTCTGTGCCTGGGCCTTGGTCGCAGTGTTCATCACCTTTGCCGTGTTCTGTTCGTTAGATGCAAGCCTCTACGAGGAGGAGTGAACACTGTATTTAAGACGGATAACCCACAAGGACCTACTGTATAGCACATGGAACTCCGCCTGGATGCGAGGGGTATTTAGGGGAGAATGGATACGTGTATATGTATGGCTAAGTCCCTTTGCTGTTCACCTGAAATTATCATATTGTTAACCAGCTATGTTTTGTTTAGTTGCCAAATCACATCCGGTTCTTTTGCAACCCCATGGACTACAGCCCACCAGGTTCCTTTGTCCATGGGATTTCCTGGGCAAGAAGACTGGAGTGGGCTGCCATGTCTTTCTCCAGGGGATCTTCCCAATCCAGGGATCAAACTTACATCTCCTGCATAAGCAGGCGGATTCTTTACTGCTGAGCCACCAGGGAAGCCCATCAATCAGCTATACTCCAATGCAAAATAAAAAGTTTAAAAAAGGAAAAAAAAAAAAAAATCCAACAACCAAAAGCCTCTCTCAAGGTCAGGTGCACATTGGAAGGAGATTGTACTGGGGATGAACAGCAGTGAGCAGAGTGGGTGGGTCGTTAGAAGCCACCTTGGAGACAGCTCGCTCCTGGACAGGACGACCGGATGACGTGTTTTCGTGTTTTCTCATTCAGCTTCCGGCTAGGCTCGGCTGAAAACCCAGGGAGCACATGGTGCAGCGCTGAGGA TCONS_00062584 . 5' 10965 TCONS_00062584 . 5' 10965 EMBV3_38699 ATGATGTTGTGCTCCCAGATGGCCGAGTCATCCCCAAAGGGAACATCTGTGTCATCAGCA Gene GeneID:534967|CYP4F3:NM_001046391:95_cdna Constitutive 0 NULL GeneID:534967 7 GENE CYP4F3 MGC137988 cytochrome P450, family 4, subfamily F, polypeptide 3 EMBV3_33238 TCTTCAGTGGAAGAGCGACACCCACAATTTGGTCCACGATCGAAGCATCTAAGTGGCGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31721 CGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCTAAAACCATGTGTGAGTGTTATGA Gene GeneID:508345|APIP:NM_001075352:33_cdna Constitutive 2 NULL GeneID:508345 15 GENE APIP MGC142303 APAF1 interacting protein EMBV3_17997 TGAAGGTGACTGAGATCATCCCACACCCTGATTACAACCACCTCCTGTCTGCCAAAGGGG Gene GeneID:617663|LOC617663:XM_002697975:718_cdna Constitutive 0 NULL GeneID:617663 25 GENE LOC617663 NULL similar to mastin EMBV3_20824 AACAACTTATTCTGCAAGTATACTATCGAACTGCTGACACTCAAGCTCTGATGGGGAATG Variant GeneID:281053|CD3D:NM_001034033:2_cdna 296^427 1 EMBV3_00101 GeneID:281053 15 GENE CD3D MGC127796 CD3d molecule, delta (CD3-TCR complex) EMBV3_14710 TCCCCATCTGTAGAATGGGAAGGGCAGACACTGGACCCTAGATCAGGTCCTTTTACCTTA Gene GeneID:505206|EHD4:XM_002690806:25_cdna Constitutive 0 NULL GeneID:505206 10 GENE EHD4 NULL EH-domain containing 4 EMBV3_30650 GGAAGCAACAGGAACATTCAAACTACAGAAGTTTCAGTTGGTGGAAGAAGGATTTAGTCC Gene GeneID:537062|SLC27A6:NM_001101169:40_cdna Constitutive 0 NULL GeneID:537062 7 GENE SLC27A6 NULL solute carrier family 27 (fatty acid transporter), member 6 EMBV3_34716 GGGTAATCTGCATTGGAGGCAAGGATAAGTGGACAGGATGAGTCTACAGGAACTGACTAC Gene GeneID:518834|UBA6:NM_001083438:35_cdna UTR3_Alt 2 NULL GeneID:518834 6 GENE UBA6 MGC140422 ubiquitin-like modifier activating enzyme 6 EMBV3_00646 ATGTCTTTGCACGTGGTTGTGTTCCCCACGGAGAAGTTCCAGCAAGGCTTTGGAAGCACT Gene GeneID:444865|ZIM2:NM_001002888:13_cdna Constitutive 0 NULL GeneID:444865 18 GENE ZIM2 NULL zinc finger, imprinted 2 EMBV3_27791 GGAGTGTCTTTCTCAATTGTGCTGTTTATTGCCATAGCCCCTCAGAGTGTCCCAACTGCC Gene BVT0101_029855 + 0 NULL GK000011.2:62950981-62992546 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028064 TCONS_00028065 TCONS_00028063 TCONS_00028066 1 XLOC_015393 Coding TCONS_00028063 XLOC_015393 Coding Coding SERTAD2 11:62988605-63001235 o TSS19750 5424 1 TCONS_00028063_4 320 2 0.57067067859688 0.000304977195483329 3.08468071146856e-05 0.000105195036913409 7.15260562663812e-11 8.1453497681457e-19 1.14359485064195e-53 4.47929061806877e-05 0.000101594169152862 1.30667073543452e-05 9.00508131683835e-06 2.22263861496632e-05 1.00640312170177e-05 1.91748553762895e-06 2.26470288488705e-06 3.11904319939405e-06 0.000989957130735287 9.2703037318336e-10 0.00236770332334252 2.86655696458591e-05 1.72201180283259e-05 8.76229788059676e-06 1.44143451468429e-09 0.000480397119774552 0.00144894060140099 8.44800675655698e-05 1.61901006560725e-09 2.21503482381746e-05 0.000147113403183032 7.77088279631489e-10 0.000241583690701733 XM_005212833.1 SERTAD2 PREDICTED: Bos taurus SERTA domain containing 2 (SERTAD2), 0.0 9470 100.00 0.967920353982301 XM_005264669.1 SERTAD2 PREDICTED: Homo sapiens SERTA domain containing 2 (SERTAD2), 0.0 5656 83.83 0.967920353982301 TCONS_00028063_4 sp|Q9JJG5|SRTD2_MOUSE SRTD2_MOUSE SERTA domain-containing protein 2; 4e-171 482 79.56 0.98125 1 coding 0 0 0 0 -0.0326093843337075 0.780273520618927 0.0259328235969966 0.599533673666928 CTGACGGCAGACACCAGGACTGAGCTCTGCCCTGTAAACCGACTGTTGAGACAACATGTCACTTAATCGTGAAGCCCGCTATGCTCCTGAGAAAGGAAAACCCTGGATTTCTACTTGTCACTTACTGGTCCAAAAGGAAATTGGAACAAGCTCTTGAAAATGTACACAAGATATATGTTGGGGAAAGGAGGAAAACGGAAGTTTGACGAGCATGAAGATGGGCTGGAAGGCAAAATCGTGTCCCCGTCAGACGGTCCGTCCAAGGTGTCTTACACCTTACAGCGCCAGACTATCTTCAACATTTCCCTTATGAAGCTCTACAACCACAGGCCCCTCACCGAGCCCAGCCTGCAAAAGACCGTGCTCATCAACAACATGTTGCGGCGCATCCAGGAGGAGCTGAAGCAGGAGGGCAGCCTGCGGCCCGCGTTCCCCGCCTCCGCGCCGCCCGCCGCCGCCGCCGACCCGCTGGGCTCCAGCTCCCGGGAGGCGCCGCCCGCCTTCAGCCAGCCCGCTCCCGCGCCCTGCGAGCTGGGCGGCGCCGCGGCCCTGGAGGCCTGCCTCACCCCCGCCTCGCTGCTCGAGGACGACGACCCGGACACCTTTTGCACTTCGTCGCCGGCCGCCCCCGCCAGACTCGCGCCTCCCGCCCTCCTCCCGCCGGAAAAGGACAGCTTCTCCTCCGCCCTGGACGAGATCGAGGAGCTCTGTCCCACATCTACCTCCACGGAGGCCGCGGAGGCCGACGGCCCGAAAGGGGACTCCTCCTCCGGGGGGCCCGGCGCGCCTCAGAGACCCGAGGGGCTGCAGGAGGGCGGCCGGCCCGAGGACCCGAAACTGATGGACTCCCTGCCTGGCAACTTTGAGATCACCGCGTCCACGGGCTTCCTCACAGACTTGACCCTGGACGACATCCTGTTCGCCGACATTGACACGTCCATGTACGACTTCGACCCCTGCACGTCCGCGTCGGGGACCGCCTCCAAGATGTCCCCCGTATCGGCCGATGACCTCCTCAAGACGCTGGCCCCCTACAGCAGCCAGCCCGTCGCCCCGAGCCAGCCTTTCAAGATGGACCTCACCGAGCTGGACCACATCATGGAGGTGCTGGTCGGATCCTGAGCCCCGGGGCCCCCGCACCTGCTCCCCACCCCACCCCCCGCACCCCGACAGCTCTCCGCACTGTGCATGCACCCTTGCTTGCCTTTTTCTGAGAAGAACATTCTACAAAAGGACCACACTAGTTTTTGCTTTGAGCAGAGTTGGAGTGCCTTCATCCAAGTATGACCACTTTTAATATGCTTTTTTTGAGTGGTTCCTCAGAGACCTACTACCCGGGAATAAGAAAGAATACATTTGAAGACGATGTGGCTGTGTTGAATGACAAAAACAGTTCAAGTGAAGCACAAGGAATAAGTTGGGAAAGCTGTAAATTGCATGTGCATATTTGTCTATTTTTTCTATAAGTTTTATTGCAAGAGTTAAAAAAAAAAAAGAATATATATATATATTATTTAGATAATCTCAGTACCTTTTCCGGCATTTTCGCCCTGTATAGGTTGACTTGGCAATTCAGCCTTTTTAGAGGCATTAACTACTCCTCGTAAGTGTTGCATTTACATGGCTGTTTAGAAACTGCTGCCCAAATTTATTTTATATTTTTGTACAGATTCTGCAGTTTATGATATTGTTTTTCTAAAAACAAATGCTGTTTATACATATGAGATAGCTATTTTGATAGGATTTGCTCACATAGTTCCTGCAAACTTCAGATGTACAAGTTGCACTTGTACTTTTATAGAGTTGTAATGTTTTATATGTGTTTGGTGCAAAGAGAAAATTGGATCAAATCAATCCGCAGTTGATGTCCCCAGATGCAAACACACACACACACACACACACACACACACACACACACAGCGCTTTAAAAAGGGCCAGGAGATATCACACCCAAATTTCATGAGCACTGACCCCCTGGCATGAACACCCGCCAGCACTGTGACTTCCAAAGCCAGAGCCACGTGTGCTCATCAAGCTTGCATTAAGCAGTTGGCGGGAGGCAGCCATGGAGCTCTGGGTTTACATGATGGTTCTCTTTCGCTCGCTCTCTGAAGGGGAAGGCTACCAAGTATTCTATTTATGCCAAGTCTGCGCTTTTAATTGTTTTTATTTTTTTTTAAACAAAACCCCAGATCTTTCCGTTTTTGGCATAATTTTTATGAAGACCTGAAATTTTACACAAGAACAGAATTTTATGAAAAGCGACCAACCTCTTCATGGAACTAAACCCTATTGCAATGTTTAGGGCTCACCAAGAAGGAACTCTTCCCCTGGAAGGCATCCATCATGTTGCTCAGTTGTCTTTTCTGGCTTCCCTTCCCTAGAGCTTTCATTCCCTCTGTTGCTAAGTGCTGAAAATGGCACCGTCACGATCACCACAGTGAGCCTGACTCTCCTCGGCCCAGCCTGGGATGCACTCGTGTGACGCCCATGGCTCTTGAACCAGGAGTTGGCCCCGTTACATCACGGCCTCTTATCTGGTTGCTTTCTCGAATCAACTGCTTTAACTTCACTTTACAAGGCTGTTTTACCCAAATACACAGGACTGTCTATGCATGTCCCCCTCTGCCCCCACTTTGCCATCCTCTCTCTGCCAGGAGAACTAGCTTTTTATTCCTAGTGATCTACTTTTAATTTTAGAATGTTTGCGATGTATCATGCTTGTTGCCGAAATTGTTTATGGCCTTTCTGTATCAGTTTTTTCTTTTCTTCCGATGGTACTTCTGCTGGTTACAACCTATATTGTTGAAACGCAGATGGCTTCTTTAGGAGTAACTTTTATATTTATTTAAGAATTTTTAAATTATGGGATTTGTGTTGTTGTTGTTGTCTTTGTTGTTGGTCATTTGTCAATATTCAGTCACCAATTCTGCTCACTTCTTGCCATGGATAAAATTGAGTCTTTCTGGCCAATTAAAAAAAGACAGCTTTATAAAATGGCACTTTATACAAGCCATAGATAGTTTTATTTTTATAATGCACATGGCAAAGCAAATACATTTGTGATGAAGGAACTGCTCATCTAAGCAGAAGATTCATGTATGATATGATTAAATCTTTCTACATTCTGATTTACTCCCCCCCCACCCCACCCCCCCCCCCACCTAAATGTGTTTTTAAAGGCTAATTATCAACTCATTCAAGCAGTGAGGAATCGATCAAATTGCACTGTTCTCCTGTAAGCACCCTCCACCAGACACCTCTTACTACTACAGATGTGTCATTCCCTATAATAGGACCAGGGACCACATAGTTAAGGTGAGGGTTTTTGTAGATGCTTCCAGTGTCACTGTGCCTGTCCATTTGAAGCGCTTCCTTTTCCTGTAGAGAACAAGACCGCCCAGACGCCACGCTTCTGCTAGCTGGAGGACCCAGCAAACCCTCCACATGCCGCACACAGACACATTCGTGTCCGTGCACAATAGTGTTCATTATCCCGGACAATAACAGGGTAAGGCAGCTGATTTGCCATTGTTAAAAACTGATTGATAGTAACTTAGAACAACTGTACTTTGGTTGGATTAGCAAATTGTGTGTTTAAACAAGTCCCATATGTTGGGCAGCAGTTCAAATAAGCACTGCGAAATGTTGCCCACACGTGGTTCTCCCACTCTCCCGCATTGATAAGGCTGGGCTTCAGGATCAAAACAAAAACCCCCAACAGCAGCACGCAAGTGCTTTTTAACTCTGGATACCCTTGCCATGAATTCTTGGTATTCAAGGTCTAATGAGGAAGAACAAGGGAAGTTAGTGGCCCTTTTTCGAAAGAACAAAACCACCAAGTGTTCCAGTTATCTTTGTGTCTTATTTTGACAAAGCGATGTCCCAACAGGGAAGAACGTGAGCCTGTGTGTGATCTCCGAGCCCCAGTTCAAGCATGGGACGTGCGTCCACATGCCACCGGTGGCAGTGCCTTCCCCCTCCTGAAGGACACCACATGGGTTTCAGAGTCAGGCAGGCAATGTGAGGTGCCTTTACGAGAGCGACATGCTGGGTGGGGCTGGGAGAGGACAATTATTGACAGTGATGTGCAATGAAGTGACAAGATGAGAGCAGAATAATAAGAGCTTTGAATTTGAAGTGATTTTTTTCATAAGTTATTTATTCCTTTTTTTTTTCTGTGTAAATATATTTATTTTACTGTGGAGCTCTAACAACATCTGGATGGTAACATGTGCAGAATGTAAGTAGGAATGTATTCTGTAGGAATGTCAATCTGTACTAGAAGGGGGTCTGAGCCAGACCCCTGGGTCTTCTCATCATATGCACAGTCCATATTCATTTTTACTCTCTTCTCTAAAATATGGGTCTATTTGAAATATGCAAAAGGTATGGATGAGGAATGTTTTAATACCTCCAAATTTTTAAGAAAAGCATCAAAGGGTTGATATTTTTTAACTTTTTTTAGTCGCACTTTCTCTCTATGACAGAAGGGGCAACCATACCACTGACACCCTTGTTCACACCAAAGGGTGAGAACTAGCCAAGCCACCTCCACCTGAGGAGTGTCTTTCTCAATTGTGCTGTTTATTGCCATAGCCCCTCAGAGTGTCCCAACTGCCCTGAGATCAATCAAGGAAAATTTCTTAAATAAATAAACTCCAAAGAGCCAAGTGTCAACTTACGGATCATTTTTAAAGCTTAAATTTATTAACCACCCTTGGTGGTAAATAATGAATTATGAATCTGCAGGGCAGCCTTCTCAGATGACAGATGTTAAAAAAAAAAAAAAGAAAACCAACCAGAGAGAGAGACTCTACGTTGTGCAGCGATTGTTATTCTCTATATGAATTGTCTTAATTTCAAAATCTTGCTGTTACAAATTGAACCTTTATACACTTTCTGAAAAGAATTGAAAAGAGCATATTTAACCTTTTCTGGCTGTAAATGGTTAACTTCCTGTAACTGCCAGTGGCAGTGAGGTGTGTGCGTCCTGCTTATGTACAATTGTTTTCAGGGCTTCTGAGAATGAGTCTAAATGGTTCTTGAAAATTAGCCAGGATCAAGTACTATTGCAAACAAAGCCAATAAAAATTGTGGATGTCTTTTGGGGATAACAAGTTTGGAAGAGAAGTGCGGTCCATACAACCAAGATTTGGAACAGATGTACATAGCAACATGTTTGGTGCATGGTTTTTGAGGAGGGCTTTTGTCAAAAAGGAGGTGTAACCTTTCCCCCACAGACCTGAGAGCTGTGCCTTTTCTATGCAATATTACAGACGTTACATCAGAACCCAGATGGTTGTATTCACATGTAGGTTTGGGCTGTAATCTGAACAATTGGACAGATTAAATGTACATGGAAATGAGCAGTCTTACTTTTGTAGTTTTATATTATACAATAAACAGTTAAAAGATGAGAGA TCONS_00028067 s 5' 0 TCONS_00028067 s 5' 0 EMBV3_26807 AGAGGTTTTCTTTTGACCCTTGTGTGCTGGGCCACAGGTCCTTCTCTTCGGGGAGACATT Gene GeneID:786706|LOC786706:XM_002697558:357_cdna Constitutive 0 NULL GeneID:786706 23 GENE LOC786706 NULL similar to butyrophilin subfamily 1 member A1 EMBV3_17515 TGCAGCTCGGACACCCAGCACCTACAAGATCAACTCAAGAGGTCAGAGGAGGAGAAACTT Gene GeneID:505371|TRAF3IP3:NM_001024476:34_cdna Constitutive 0 NULL GeneID:505371 16 GENE TRAF3IP3 MGC140414 T3JAM TRAF3 interacting protein 3 EMBV3_36919 TAGCGAAGACAAAACAGCCTTTCTGGACCCTTCTCCCCAAATCTGGTGCCTGCCACTGAA Gene GeneID:100125578|LOC100125578:NM_001105036:2_cdna Constitutive 0 NULL GeneID:100125578 4 GENE LOC100125578 MGC159769 hypothetical protein LOC100125578 EMBV3_18926 TGTCACCTGCAGTCAACCCCATTGAGTCCCCCAAAATGACAGCATTCACAAACTAAAGCC Gene GeneID:613396|TMEM192:XM_002694306:11_cdna UTR3_Alt 3 NULL GeneID:613396 17 GENE TMEM192 NULL transmembrane protein 192 EMBV3_27309 CCAGAGGTGGAAGGAGGCATCTCATCGGAACCAGCTACGTTACTCAGAGAGCATGAAGAT Gene GeneID:534550|LIN37:NM_001076026:682_cdna Constitutive 0 NULL GeneID:534550 18 GENE LIN37 MGC140066 lin-37 homolog (C. elegans) EMBV3_13468 TAGTCCTGTATACCAGAGCATGACCCAGTTTTCATACTGCCAGTCCCTCCAACAAGAAAC Gene BVT0102_014245 + 0 NULL GK000021.2:68788-736182 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03832 AATCCTGAATTAATCTTTAAACACTTTCAAGTATTGCAGTTGGACACATATATTTTTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43320 CTGAAAGTTGTCATGAAGTAAAAAGGTTTCAGGGGGCAGAATCCAGGGACCATCAAGGGG Gene GeneID:512714|LRRC34:XM_002684932:90_cdna UTR3_Alt 4 NULL GeneID:512714 1 GENE LRRC34 NULL leucine rich repeat containing 34 EMBV3_38052 GGCTTGCTGTATTAATGTTTGCTTTATAAGTAATAAGTTTGCCCGAAGGATGCTAATGTG Gene GeneID:540808|FCHO2:NM_001098119:154_cdna Constitutive 2 NULL GeneID:540808 20 GENE FCHO2 NULL FCH domain only 2 EMBV3_25771 TTCCCCACTTAGTTGGCTTCCAGACACTTACAAAGTCCCCTTTTGATTCAGAGGGATAGC Gene GeneID:540824|BCL10:NM_001078028:83_cdna UTR3_Alt 2 NULL GeneID:540824 3 GENE BCL10 CARMEN CIPER B-cell CLL/lymphoma 10 EMBV3_41980 TCTCTGACCCAAGGAATGATTTAAGGACCAGCGTTTGCAGGCACCTGAGGACGTGACACT Gene GeneID:519689|SEC16A:XM_002691659:400_cdna Constitutive 0 NULL GeneID:519689 11 GENE SEC16A NULL SEC16 homolog A (S. cerevisiae) EMBV3_06129 AGGAAGCAGCGGAATTTCAGGCAGAGTTTGTGATCCTGCCTCACATTGGCAGTGCCACCC Variant GeneID:504764|GRHPR:XM_002689718:25_cdna 624^890 4 EMBV3_31719 GeneID:504764 8 GENE GRHPR NULL glyoxylate reductase/hydroxypyruvate reductase EMBV3_05932 CCGGCCTCCTCTACGCGCTGGTGCAGCTCGGTTGGTGCAGAAGGCGGAGCTGGTGCGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06795 CCCTCTGGCTCGTGTGCTCTTTCACGTCAATCCTATGAAGCGCATTCGTCGGAATAGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01295 AGCACACCTTCAAGCAGGAAATGACTGGAGTGGGAGCCAGTCTGGAGAAGAGATGGAAAT Gene GeneID:517820|ENOX2:XM_002699541:34_cdna Constitutive 0 NULL GeneID:517820 X GENE ENOX2 NULL ecto-NOX disulfide-thiol exchanger 2 EMBV3_30526 CAGTAGGTGGTGGAAGGAGAGAACAGCAGTCAGGAGCTAAAACCCTACAGCACTTGGTTT Gene GeneID:514447|CLSTN1:XM_002694061:173_cdna UTR3_Alt 3 NULL GeneID:514447 16 GENE CLSTN1 NULL calsyntenin 1 EMBV3_41156 TGATCCAGCTTGAGGATGGGACCACTGCATACATTCACCAAGTGACAGTGCAGAAAGAGC Gene GeneID:100300346|LOC100300346:XM_002697199:27_cdna Constitutive 1 NULL GeneID:100300346 23 GENE LOC100300346 NULL similar to zinc finger protein 76 (expressed in testis) EMBV3_33087 CAAGATCTCCCGTTTCGAGAAGCACCTGTACAACGCGGCGGCCTTCAGAGCCAGGACCAA Gene GeneID:767939|IFRD2:NM_001077012:328_cdna Constitutive 1 NULL GeneID:767939 22 GENE IFRD2 MGC129055 interferon-related developmental regulator 2 EMBV3_02228 CGCATTGCTTAGCTCAAGGTTTGTCTGGGAAATTCTTACACGTCAGGAGATGGCTCCGAG Gene BVV0102_057757 + 0 NULL GK000017.2:4436084-4464685 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36851 AGGCAGAGATTGGAGTTATTCTGCCTCAAGCCAAGGAATGCCAAGGATCACTGGCCAGCA Gene GeneID:100138964|LOC100138964:XM_002696393:137_cdna Constitutive 0 NULL GeneID:100138964 20 GENE LOC100138964 NULL hypothetical protein LOC100138964 EMBV3_29804 TAGCTACGCAACTATCCCACATTGTCTGGCTCTGGGTGACCGACCACACCATTGTAGTAA Gene BVT0102_053673 + 0 NULL GK000016.2:29561669-29585791 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30952 CATGTCCCTGCATTGGCAGTCGAATTGTTTATCACTGAGCCACCAGGGAAGCCCTTGAAT Gene BVV0102_415833 - 1 EMBV3_16053 GK000011.2:47384704-47409404 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26486 TCCCGCACCAGTCGTGGGCGTCCTGGTCAGATTTTTACTACCCTTGGATGCACTCCTGAT Variant GeneID:539045|WDR89:NM_001034658:184_cdna 49^173 1 EMBV3_01721 GeneID:539045 10 GENE WDR89 MGC128803 WD repeat domain 89 EMBV3_15185 TTCCACTTTCCGGGTGTGGCCGCGAGTCGGCACAGCATTCTGAAATTTTTTGGTCATTGC Variant GeneID:614078|C18H16ORF61:NM_001113175:62_cdna 131^243 3 EMBV3_05006 GeneID:614078 18 GENE C18H16ORF61 MGC137594 chromosome 16 open reading frame 61 ortholog EMBV3_20420 CCTAAGCCTCAGGGCTCAGGGCTTGCTGTAATGTCCGCAGCTTCTCAGAGAGAAAATAAA Gene GeneID:617403|TMEM52:XM_002694183:642_cdna Constitutive 3 NULL GeneID:617403 16 GENE TMEM52 NULL transmembrane protein 52 EMBV3_13434 CAAGAGCAAAATGCTGTCTGAGTACCTGAGGGGGCAGATGCGTGTTCATGTCAAGGAGCT Gene GeneID:523042|FNIP1:XM_002688971:137_cdna Constitutive 1 NULL GeneID:523042 7 GENE FNIP1 NULL folliculin interacting protein 1 EMBV3_13116 TACCATAGGGGACCTGGTTTTGGACTCTGACGAGGAAGAAGATGGCCAGAGGGAAAGAAG Gene GeneID:540420|TINF2:NM_001098114:243_cdna UTR3_Alt 2 NULL GeneID:540420 10 GENE TINF2 NULL TERF1 (TRF1)-interacting nuclear factor 2 EMBV3_39166 ATCTCATTTACAACTGCAGCCTATGTACATGTCAAAATAACACAAATGGCTTCAGTACAT Variant GeneID:787444|NKAIN2:NM_001102345:21_cdna 347^435 1 EMBV3_00990 GeneID:787444 9 GENE NKAIN2 MGC140156 Na+/K+ transporting ATPase interacting 2 EMBV3_13808 GTTGTAGACCCGCAGGCAGAAGCTCCCCCTTCTGTATCCTATGTACGCAGTGTGCTTTTT Gene GeneID:282326|HTRA1:XM_002698550:9_cdna Constitutive 0 NULL GeneID:282326 26 GENE HTRA1 PRSS11 HtrA serine peptidase 1 EMBV3_28253 CTCTTTTCTTGGGGCCGCGGTTCCCGGCGGAAAAATTGATGTTTTGAAAGCAACTGCAGA Variant GeneID:509952|DECR1:NM_001075423:27_cdna 70^272 1 EMBV3_22492 GeneID:509952 14 GENE DECR1 MGC139401 2,4-dienoyl CoA reductase 1, mitochondrial EMBV3_27804 CTCCTGCTGAATCATGAGCCTCCCTCAGTTATCACCACCACTGGGAAACTTTGTGGGATA Gene GeneID:538876|SDR9C7:NM_001083737:19_cdna Constitutive 0 NULL GeneID:538876 5 GENE SDR9C7 MGC151815 SDR-O short chain dehydrogenase/reductase family 9C, member 7 EMBV3_36776 TCCCTTCTGTGTTCATGTCTGCAGCCGAGGCTGTAGGAAGGATGGGCTACAGGAGCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08648 ACAAGGTCAACTACTGCTCCACCTTCTGCCAGCGCAAGGACTGGAAGGACCACCAGCACA Gene GeneID:100336582|LOC100336582:XM_002699407:47_cdna Constitutive 0 NULL GeneID:100336582 29 GENE LOC100336582 NULL deformed epidermal autoregulatory factor 1-like EMBV3_00461 GACATATCTATATAAATTGTCTAGCTGGGGCAGGGCCTTCAGCTATCATTTGGTTAATAA Gene GeneID:510604|PCF11:XM_002699067:88_cdna Constitutive 2 NULL GeneID:510604 29 GENE PCF11 NULL PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) EMBV3_38779 AAATGAGTATGTTTAAATTCTGAATATTATGGTGGCCTAAAGTAGGCTTCTTGGTACACC Gene GeneID:529366|SLMAP:XM_002696995:372_cdna Constitutive 2 NULL GeneID:529366 22 GENE SLMAP NULL sarcolemma associated protein EMBV3_32608 GAAGATGCTCTTGCTGAAGCCATGTATGAGGAGCTTGATGACCTTGCAACACGGAAGGAG Gene GeneID:100137765|LOC100137765:XM_002707819:153_cdna Constitutive 0 NULL GeneID:100137765 5 GENE LOC100137765 NULL similar to BoWC1.1 EMBV3_34424 GGGGGGAGGGAGAGTTTTGTCTAATCCTTCGTTTTTTCTTATCTGGTCTTGCTGCCTCCG Gene GeneID:506122|MTMR11:NM_001035030:58_cdna Constitutive 1 NULL GeneID:506122 3 GENE MTMR11 MGC126934 myotubularin related protein 11 EMBV3_18506 ACTTGACGTGAGAGAGAGGACAGTGGAGCATAGAAATGTTGAGAGATGGTCCAAGGCCAC Gene BVV0102_232971 + 0 NULL GK000018.2:64860146-64870964 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02759 GAAGTAAGGCTTTCCCGTGGAATTACAGCGTCTAGGGTCACAAAACAGAGGATTGTCCCC Gene BVV0102_106195 + 0 NULL GK000030.2:139928581-140120254 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248530 TCONS_00248531 TCONS_00248532 1 XLOC_151624 Coding TCONS_00248531 XLOC_151624 Coding Coding GYG2 X:140117317-140143285 j TSS185849 4692 1 TCONS_00248531_2 439 0.303282182438193 9 0.819655716871414 7.98344201313872e-06 4.71780986292038e-11 0.000106274440281507 3.32588605837124e-11 2.27683505151908e-11 1.53270611444385e-11 3.18308286037404e-11 3.32427114357902e-11 4.65120142180967e-06 2.16199588430981e-11 0.000130491494454813 3.36491139816567e-13 1.25553013818829e-11 1.77368194267644e-11 2.71028103896917e-11 0.00175626099817871 0.000942314146380629 0.00111808517285915 3.42265972530876e-11 3.08638455099414e-11 1.86602684916367e-11 0.000216324799478157 0.000130936637474502 0.000246084652197384 4.18123184359707e-11 3.21580783806043e-11 1.06035468970983e-05 5.22645683928251e-05 5.77928140794737e-05 0.000288302496656977 XM_005228483.1 GYG2 PREDICTED: Bos taurus glycogenin 2 (GYG2), transcript variant X6, 0.0 7515 100.00 0.887894288150043 NM_001184703.1 GYG2 Homo sapiens glycogenin 2 (GYG2), transcript variant 4, mRNA. 0.0 897 77.01 0.248721227621483 TCONS_00248531_2 sp|O15488|GLYG2_HUMAN GLYG2_HUMAN Glycogenin-2; 3e-172 497 68.04 0.817767653758542 1 coding 0 0 0 1 -0.03212466359134 0.784185813427088 0.0098008053936988 0.864056983533361 CCGGGAGCGGATTTGGGGCGCACTTGGGCTGCTGGAGCGCAGAGACTCAGAGAGGCGCGGGGCGCAGGGCTAGACACGCGGTGAAAGGAGTGATCGGGTGGGGGGCGCAGCGAGGCCGCTGAAGTCTCGGCCGTGGATGGGGGCCTTGAACTCGGAGCGGGTGGGGCCCCTGGAGACGCAGCCGACGCCTCCGCTCGGCTGGGCGGCTGGAGCCCGGGAGAGAGGCAGCCCGCCGCGCCTGGGCGCCCTCGGCCACGTGGTGCCCATCGCGCGCTGCGCCCACACCATGCCTGTGTCCGACCAGGCGTTTGTCACGCTGGCCACCAACGACGTCTACTGCCAGGGGGCCCTGGTGCTGGGGCAGTCGCTGCGGGAGCACAGGGCCACCCGGAGGCTGGTGGTGCTCGTCACGCCTCAGGTGTCCAACCCGCTCAGGGTTATCCTCTCAAGGGTGTTCGATGAGGTCATCGAGGTGAACCTAATAGACAGTGCGGACTACGTCCACCTGGCCTTTCTGAAGAGACCTGACCTCGGGATCACCCTCACCAAGCTCCACTGCTGGACGCTCACCCGTTACAGCAAATGCGTCTTCCTGGATGCAGACACACTGGTGCTGTCCAACATCGATGAGCTGTTCGACAGGAGGGAGTTTTCTGCGGCCCCGGATCCCGGGTGGCCGGATTGCTTCAATAGCGGGGTGTTTGTCTTCCAACCCTCGCTGGAGACGCACAGCCTCCTGTTACAGCACGCCACCGACCACGGCAGCTTTGATGGGGCAGACCAAGGCTTGCTGAACAGTTTCTTCAGTAACTGGTCCACCGCCGACATCCAGAAGCACTTGCCCTTCATCTATAACTTGAGCAGCAACACCACGTACACCTACAGTCCTGCTTTTAAACAATTTGGCTCCAGTGCGAAGGTGGTCCACTTTCTGGGGTCCTCAAAGCCTTGGGACTGCAAGTACAATCCCCAGACGGGCTCCGTTTTGGAGGAGGGCTCCGGGCGGGCCGACCAGCATCAGACGTCCTTCCTTAACCAGTGGTGGGGAATTTACCACCGTAGCATCTTGCCCCTTTGTGAAGATATCCGGAACAAGGACCACCACGCGCCCCCAGGTCACACGGCTCACCTCGGAGGCGCTGGGGTGCCGTGTTCCAGTGCAGCGGCCGCGGCAGAGGGGTCGTGTGCGAATCCAGCAGAGGGGCCCAGGCAGGCTTGCTCTGCTGACGCCTCGGAGAGGATCATGGGGGTGGAGGAAGACATCCCTACTCGGGCAGCGTGCCCTTCCGAAGAGGTGGACCTGACCATTTCCGTCTCCCAGATCTCCATCGAAGAGAAGCTCAAGGTCCTGAGTCCCGAGGAGGAGCGGAGGAAGTGGGAGGAGGGACGGATGGATTACCTGGGGAAGGACGCCTTCGCCCGCATTCAGGAAAAGCTGGACCGCTTCCTGCAGTGACCACACTGTTCTGATGAGCGGTCCTGTTCCATCAACGTCCCAACGTTCCGAGGAGGAGCTCTTCACCCACGTGCCTCTGTTTACGGTCAACCCACCTGAGTGCCTTCTGCCCACCCCGTGGTCCATCCAAAACCCAGCTTGAAGCCCCGTGTGACCCAAGCTCCCCATGCCTCTCAGGCTTCCCCAGGGACGTCCTGTCTCCTTTATGTCTTGTTAGCAAATCACTGAGGATGGTGCCTGCAGCCATGAAATTAAAACACACTTTCTCCTTGGAAGAACAGCTTTGACCAACCTAGACAGCGTATTAAAAAGCAGAGACATCACTTTGCCCACAAAGTCCGTCTAAGTCAAAGCTATGGTTTTTCCAGTAGTCATGTGTGGATGTGAGAGTTGGACCATAAAGAAGGCTGAGCGCCAAATTGATGCATTGAATGATGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAAGACTGATGCTGAAGCTGAAGCTCTAATACTTTGGCCACCTAATGGGAAGAGCTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGAGATGGTTGGATGCCATCACTGACTCGATGGACATGAGTTTGGGTAAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCAGTCCATGGGGTCGCAAAGAGTCAGACACGACTGAACAAGTGAACAACAGCAGTGAAAGAGAACATGAGTATAGCTTTCTGGTCAACCCTGGGTCTCTGGACTTGCTTGAAGGAGCTCAGGATTTTCTCCTGGACTGATAAAACCACGTCCGTCCTCTGTAGGATTAGCTTGAAGCACTGCAGAGCTTCAAACGCATAGCACTCAGAAAGGTACTGAGCTCCCTGAGAACCTTCCAGAATGATTAAGTCCTTTTCTTGAAGATGGGGTCAACGTTCGGATGTCTTGAGTGTGACTGTGGTGTGAATTTTGCCAAGAGTGGCTGACAGACACCACGGCTGTGCTTTCTCTTCTGCAGAAATACTCAGGGGGACTTCAAAGTGTCTTGACATAGTCCCCGTGGCGACACGTCAGAAATATTTGGAAGGAGATTCTAGCTGGCTTGGGAGAGATGACCTCTTCCAAACTGGTTTACCTACTGGTGTAGAAGACGTCCCAGATGGCGCTAGTGGTAAAGAACTCTCCTGCTAACGCAGGAGATATGGGTTCGATCCCTGGGTCCGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTTTTTTTTCTTTTTTTCCATTTTGAACTTTTTATTTTGTATTAGGATGTAGCCGACCAACAATGTTATGATGGTTTCAGATGGACAGTGAAGGGACTCAGCCTGATACATAGGGGTATCCATTCTCCCCCAAACTCCCCTCCCATCCAGGCTGCCACGTGGCACTGAGCACGCAGGAATAAGCACCCAGGGTTTACGCCCAAGGGTCATGTGCTCATGGCGAGTGGATCTGGGGAGGCTGTTTCTCTGGAGGCGAATCCGCGCGGGGTCGAGGACACTGGACTGCCCTTGGCTGGGTCTCACTACCTCACCTCACAGCTGCACTCGCGGGCCTCGGTGAGCCAATGCAACTCAGCTATGTGGGGACAATCCTCTGTTTTGTGACCCTAGACGCTGTAATTCCACGGGAAAGCCTTACTTCAGAAGCATCCAAGTTCTGGAAATGAATGCAGTGTGTCAGACCCTCTCAGGGAGTCAGTGTTTGTGGCCACCGCAAGGATAATTAAAGCCAGGTGTCAGCTGCTGTCCTAAGAGGAGGAGATGCTGGCCACCACAAAGATGATTAAAGCCAGACATGGGTCGCTGTACTAAAGACAAGATGTGGGTTTTAAATGTTTGAGTGGTTTATTTATAGCTTCCCCAGGTGGCTGAGTGGTAAAGAATCTGCAGGAGGTCTCAGGTTTGATCCCTGGCTCGGGCAGATCCTTGGGAGGAGGAACTGGCAACCCACTCCAGTGTTATTGCCTGGAGAATCCCGTGGACAGAGCAGCCTGGGGGGCTACAGTCCATGAGGTCGCAGAGTCAGACATCACTGAATGGCTGAGTACGTCCTATTGAAAATTGTGACATGGGTTTGTAAGAAGGTTGAGAGGGCTTTGTTTAAATCCACGTGGGATCCGAGTGGACTTCTGGGGTTTGTTGTAGCGTTTGCTGTGAGAGGCGCCCGCTATGGAGGGGCTTTTATTTCTTCTCTGTGGATGAATGATCTGGCGTCTTGGTTGGTCTCCTACATATGATGCTTCAGGGGCTACTACCAAAGAGCCGTGGGGACGAACTCCTTGGGTGGGCTGGGTGGGGGGAAGGTGATGGTTGCCAACCATCACAGTAATCCCTTAGGCTTGTTTTGGGGAAACATGATGTTGGACTGTAAGATACAAAAGGCCAATTCTATGTCCATGAGAGGAGAACCCCGGATGGTGAACATCGGAGTCCAGCTTCTCCGAAGAGGACCCTCCGTACGAATGCTCCGACAGCTCACTGGCTTCAAGTCTAGACTCAACTCGGATCTCTCTCCCATATTATGAAGTCTGTCCGTCTGGATGAAGGCTAGCGCATGGCAATTAAAATCCTAGGACGGCAACGCGGTCTCCTTCTTGGGTTTTTGGATGTGTTCTGAGTCTTCAGAACGCCATTTATAGGAATGTGACTGGCTTCGTTTGTCTTACTATCAATTAAAATAACCAAATGGGTTTTTCAGAATTGATAGTAACCTAAATGGGAAGGAAATCCAAAAGAACAGGGGATACATGTATTCATTGCTCAGTCACGAAGTCGTGTCTGAGTCTCTGTGACCCCATGGATTGCAGCATGACAGGCTTCCCTGTCCTTCACCATCTCCCAGAGTTTGCTTCAACTCATGTCTGTTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGTCTCCCTCTTCTGATCTCAATCTTTCCTAGTATCAGGGTCTTTTCCAGTGAGTCGGCTCTTCCCATTAGGTGGCCAAAGTATTAGAGCGTCAGCTTCAGCATCCGTCCTTCCAGTGAATATTCAGGGTTGATTTCCTTTAGGATGGACTGGTTGTATCTCCCTGCAGTCCAAGGGACTCGTATAGCTGATTGACTTTGCTGTACG EMBV3_38382 GAAACCTGGCTAGGACTCTTTCATATTACTACACTGGGCATAAATGGGCATTATCATGGC Gene BVV0102_169059 - 1 EMBV3_05347 GK000010.2:47957475-48071763 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33822 GAAAATGAAAGAGAAGTGCTCTTAGAAAAGTTTTTTGGACCATATACAAACAACACTCTT Variant GeneID:521533|MMADHC:NM_001034541:94_cdna 713^799 3 EMBV3_24506 GeneID:521533 2 GENE MMADHC C2H2ORF25 MGC127500 methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria EMBV3_40455 CCCCTGCGCTATGCCTCTGTCCTCACAAACAATGTCATCATCAGGATTGGAGTGGGTATT Gene GeneID:526621|LOC526621:XM_002693403:68_cdna Constitutive 0 NULL GeneID:526621 15 GENE LOC526621 NULL similar to olfactory receptor Olr60 (predicted) EMBV3_23834 TGCGGGGATGAGCAGAATCCCCAAAGCATGAATGTGTGTGTCTCCTTGGCTTATAGGGCA Gene GeneID:506115|CTDSP2:NM_001045935:944_cdna Constitutive 1 NULL GeneID:506115 5 GENE CTDSP2 MGC128840 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 EMBV3_03764 TCTGCTTACCTCCCTTCGGGCCAAGCATACCCAGGAGAATTGTGAGACTTGGGGTGTAAA Gene GeneID:504735|CCT3:NM_001017934:73_cdna Constitutive 0 NULL GeneID:504735 3 GENE CCT3 NULL chaperonin containing TCP1, subunit 3 (gamma) EMBV3_02603 TCCGTGGAGCACTTCTTTGAGACGGTGGGCGTTTCTCTGGCCGAGCGACAGTGTGTTCCA Gene GeneID:506598|CARS2:NM_001045944:45_cdna Constitutive 1 NULL GeneID:506598 12 GENE CARS2 MGC137370 cysteinyl-tRNA synthetase 2, mitochondrial (putative) EMBV3_20176 CCTCATGAAGTACTCAGCCTTTCAGACCTTGGATGGAGAGATTGACCTGAAGCTCCTCAC Gene GeneID:513228|C10H14orf179:NM_001040521:108_cdna Constitutive 1 NULL GeneID:513228 10 GENE C10H14orf179 C14orf179 MGC133507 chromosome 14 open reading frame 179 ortholog EMBV3_18942 ATGCACAACCGGCCAAACAGCGACGTGCGAGGCACACAGCAAAGTGTTATTATTCACGAG Gene BVT0102_250550 - 0 NULL GK000025.2:39089919-39119536 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35903 GGCATGTCTTTAAAAATATTAAGGAGGTAGATACACTTGGGTACTTATTGAAATGGATGG Gene GeneID:537161|ACSL1:NM_001076085:67_cdna Constitutive 0 NULL GeneID:537161 27 GENE ACSL1 MGC139933 acyl-CoA synthetase long-chain family member 1 EMBV3_32583 GCCAAATAACACATTCTGGGTGGAGAGGACTGTGGTTGTAAACCTCCTGTTGGACATAGG Gene GeneID:100296543|LOC100296543:XM_002696336:34_cdna Constitutive 0 NULL GeneID:100296543 20 GENE LOC100296543 NULL similar to Ras-GTPase-activating protein SH3-domain-binding protein EMBV3_19581 CTCAGCAGAGAAGGTCAGCTTGGAGCACAGGGAGTATAACAAGTACACAGTGGAGTGTCA Gene GeneID:281857|IL12B:NM_174356:7_cdna Constitutive 0 NULL GeneID:281857 7 GENE IL12B IL12p40 interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) EMBV3_17638 TTGCTCAGTACGATTTCCCTGGGGGAGAAAGCCAAAGAGGAGGTGAACGTCGTGGAGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07397 GAAACCAGCAAGCAACTCTGAGATGTTCCCCTCACTCTGGACACTTCTCTGTGTACTGGT Gene GeneID:100297263|LOC100297263:XM_002687088:325_cdna Constitutive 0 NULL GeneID:100297263 4 GENE LOC100297263 NULL hypothetical protein LOC100297263 EMBV3_38141 GGCCGACCGTGGGGCCAGCTAGAATGGCAATAAGGACCTCGAATACATATTTAAACGCAA Gene GeneID:540380|DUSP4:XM_002698687:33_cdna Constitutive 0 NULL GeneID:540380 27 GENE DUSP4 NULL dual specificity phosphatase 4 EMBV3_28821 GTACGTTTTTAGGCAGACTTGTGTGTGACTCTGGTAGGAAACTCAGCTTGGCCAGCAGTG Gene BVT0102_301559 + 1 EMBV3_03635 GK000029.2:50747162-50768652 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29963 GTTAGGGTTCAATGATGCAGACACTGTAATCCTTCCCACTTGGCAAGACCCACTGCATGC Gene BVV0102_029597 - 0 NULL GK000009.2:76410751-76766556 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21660 CCCAACTCCTCATACTGTTTGCTGCAACTGGAATACCTGGGAAGCCCTTCTGGCCTACTT Gene GeneID:536818|SLC7A8:XM_002690505:481_cdna Constitutive 0 NULL GeneID:536818 10 GENE SLC7A8 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 EMBV3_25076 CAAGAAAGAGCTGCCCTCGCTGCTGGTGATCGTGGCGGTGAGCGTGTTCCTTCTGGTGCT Gene GeneID:617436|ISLR2:XM_002696684:359_cdna Constitutive 0 NULL GeneID:617436 21 GENE ISLR2 NULL immunoglobulin superfamily containing leucine-rich repeat 2 EMBV3_31725 GTATGTTATCTGCCTGTCCAAGCCTTATTGCCCTCACTATGTTTGATTGTCCAGTAAGCC Gene GeneID:523789|LRRIQ3:NM_001105391:40_cdna Constitutive 0 NULL GeneID:523789 3 GENE LRRIQ3 LRRC44 MGC179274 leucine-rich repeats and IQ motif containing 3 EMBV3_28834 CATCCTGGCGACCTATCATCCAGCAGACAAAGACTACGGTTTAATGAAGATAGACGAGCC Gene GeneID:532726|PPP1R2:NM_001035392:96_cdna Constitutive 1 NULL GeneID:532726 1 GENE PPP1R2 MGC127677 protein phosphatase 1, regulatory (inhibitor) subunit 2 EMBV3_09487 GGATCCAGGAGAAAGTGTGGCTCTCCCAAGAGGTGGATAAACTGAGAGTGATGTTCCTGG Gene GeneID:504585|SPAG5:XM_002695746:443_cdna Constitutive 0 NULL GeneID:504585 19 GENE SPAG5 NULL sperm associated antigen 5 EMBV3_06621 AAGTGTTCCTAAAGTATAGCTTTTAGATATTTGTCAGGGGCAGGAAACTAACTCCAGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42702 CTGCTGGCTGGACCTGTCCTGATGAGTGCATCCTAACACTGAAGAGAAGGCTCAAGACAA Gene BVV0102_068827 + 0 NULL GK000001.2:144701620-144751325 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34629 CTTAGAACAAAGGACAGGCCAAAGACCAGACGAACATAGACTAAGCTGCGGAGCACTGAG Gene GeneID:780784|TMOD1:NM_001079640:50_cdna Constitutive 0 NULL GeneID:780784 8 GENE TMOD1 NULL tropomodulin 1 EMBV3_09989 AAACAGATGACCTGCTCCGGGATCCCAAAGGGTTCAGCACCTTGGCCCAGCTGAAGCGGC Variant GeneID:509801|LOC509801:XM_002696068:400_cdna 167^478 1 EMBV3_22082 GeneID:509801 19 GENE LOC509801 NULL similar to CD79B antigen EMBV3_31509 GGAGCCAGGGTCCTGCAAGCCGCACAGCACTTACCTCATTAAAATTGATCAAGTGCTTGA Gene BVV0101_079567 - 0 NULL GK000017.2:71470128-71497411 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078150 TCONS_00078152 TCONS_00078149 TCONS_00078151 1 XLOC_047234 Coding TCONS_00078151 XLOC_047234 Coding Coding SF3A1 17:71496320-71517136 j TSS58221 3761 1 TCONS_00078151_4 793 0.0271204466897102 17 0.820129714148451 2.42493958386794e-07 2.27295766689968e-11 2.44301496277536e-07 1.43684964677695e-19 1.07212738486947e-09 6.02179957423135e-06 4.47789718736559e-09 3.55934377453539e-05 0.000295830574973503 1.43522980019217e-09 2.97158376340561e-09 3.30254003454285e-05 2.42121478283606e-06 1.39844653028372e-05 6.88136642522751e-11 0.000225039253469194 0.000233831057330643 0.000617180725482113 5.71309485173771e-05 0.000436359018984653 0.000304360831356208 8.14951220108429e-05 0.000187672217894391 0.000325711859892598 0.000379201316402154 3.43418002688945e-08 9.77123838026431e-05 0.000124701433984486 0.000244835722812981 0.000731019359469582 XM_005218033.1 SF3A1 PREDICTED: Bos taurus splicing factor 3a, subunit 1, 120kDa (SF3A1), transcript variant X1, mRNA. 0.0 4800 100.00 0.707258707790481 NM_005877.4 SF3A1 Homo sapiens splicing factor 3a, subunit 1, 120kDa (SF3A1), 0.0 3517 90.96 0.668971018346185 TCONS_00078151_4 sp|A2VDN6|SF3A1_BOVIN SF3A1_BOVIN Splicing factor 3A subunit 1; 0.0 1581 100.00 0.998738965952081 3 coding 0 0 0 1 -0.153361821323441 0.475662120793086 0.0186963844847868 0.694895997887099 CGACAATTCGGTCGGCTGCCGCCATCTTGAGAGCTTGTCGTACTGTTGGTGCGGGGAAGGCGCTTTGACGCCGCACCGCTCACCTACACCGAGGCGGACTGGCAGCCCTGAGCGTCGCAGTCATGCCGGCCGGACCCGTGCAGGCGGTGCCCCCGCCGCCGCCCGCGGCCACCGAGCCCAAACAGCCCACAGAAGAAGAAGCATCTTCAAAGGAGGATTCTACCCCATCCAAGCCCGTGGTGGGTATTATTTACCCTCCTCCGGAGGTCAGGAACATCGTTGACAAGACTGCCAGCTTCGTGGCCAGAAATGGACCTGAATTTGAAGCGAGGATACGACAGAACGAGATCAACAACCCCAAGTTCAACTTCCTGAACCCCAACGACCCTTACCATGCCTACTACCGGCACAAGGTCAGCGAGTTCAAGGAGGGCAAGGCTCAGGAGCCCTCGGCCGCCATCCCCAAGGTCATGCAGCAGCAGCAGCAGGCCTCCCAGCAGCAGCTGCCCCAGAAGGTTCAAGCCCAAGTGATACAAGAAACCATTGTGCCCAAAGAGCCCCCTCCCGAGTTTGAGTTCATCGCAGACCCCCCTTCCATCTCAGCCTTCGACCTGGACGTGGTGAAGCTGACAGCTCAGTTTGTGGCCAGGAATGGGCGCCAGTTTCTGACCCAGCTGATGCAGAAAGAGCAGCGCAACTACCAGTTTGACTTCCTGCGCCCGCAGCACAGCCTCTTCAACTACTTCACGAAGCTGGTGGAGCAGTACACCAAGATCTTGATTCCACCCAAAGGCTTATTTACCAAACTCAAGAAGGAGGCAGAGAACCCCCGGGAAGTTTTGGACCAGGTGTGTTATCGCGTGGAGTGGGCCAAGTTCCAGGAGCGTGAGAGGAAGAAGGAGGAGGAGGAGAAGGAGAAGGAGCGGGTTGCCTACGCTCAGATCGACTGGCATGACTTCGTGGTGGTGGAAACAGTGGACTTCCAACCCAACGAGCAAGGGAACTTCCCCCCGCCCACCACCCCGGAGGAGCTGGGGGCCCGGATCCTTATTCAGGAGCGCTACGAGAAGTTTGGGGAGAGCGAGGAGGTCGAGATGGAGGTTGAGTCCGATGAGGAGGACGAGAAACAGGAGAAGGCGGAGGAGCCTCCGTCCCAGCTGGACCAGGACACTCAAGTACAAGACATGGACGAGGGTTCGGATGATGAAGAAGAAGGGCAGAAAGTGCCGCCACCCCCGGAGACACCCATGCCACCTCCTCTGCCCCCAACTCCAGACCAGGTTATTGTCCGGAAGGACTATGACCCAAAAGCTTCCAAGCCTCTGCCTCCAGCCCCCGCTCCCGATGAGTATCTTGTGTCCCCCATTACTGGGGAGAAGATCCCTGCCAGCAAGATGCAGGAGCACATGCGCATTGGGCTTCTCGACCCCCGTTGGCTGGAGCAGCGGGATCGCTCCATCCGTGAGAAGCAGAGCGATGACGAGGTGTACGCGCCAGGTCTGGATATCGAGAGCAGCTTGAAGCAGCTGGCCGAGCGGCGTACAGACATCTTTGGTGTGGAGGAAACGGCCATCGGTAAGAAGATCGGCGAGGAGGAGATCCAGAAGCCGGAAGAGAAGGTGACCTGGGACGGCCACTCTGGCAGCATGGCCCGGACCCAGCAGGCCGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCATCCACAAGGCGAAGGGCCTGGTGCCGGAGGATGACACCAAAGAGAAGATCGGCCCGAGCAAGCCCAACGAGATCCCCCAGCAGCCGCCGCCGCCGTCCTCAGCCACCAACATCCCCAGCTCGGCCCCGCCCATTACATCGGTGCCCCGGCCGCCCGCGATGCCGCCTCCCGTCCGCACCACAGTTGTGTCCGCAGTACCTGTCATGCCCCGGCCCCCGATGGCATCCGTGGTCCGGCTGCCCCCAGGCTCAGTGATCGCCCCCATGCCGCCGATCATCCACGCGCCCAGGATCAACGTGGTGCCCATGCCTCCCTCGGCCCCTCCTATCATGGCGCCTCGCCCACCACCCATGATTGTGCCGACAGCTTTTGTGCCCGCCCCACCCGTGGCACCTGTCCCTGCTCCAGCCCCCATGCCGCCTGTCCACCCCCCGCCTCCCATGGAAGACGAGCCTGCCTCTAAGAAACTGAAGACCGAGGACAGCCTCATGCCCGAGGAGGAGTTTCTGCGCAGAAACAAGGGTCCAGTGTCCATCAAAGTCCAGGTGCCCAACATGCAGGATAAGACAGAATGGAAACTGAATGGACAGGTGCTGGTCTTCACCCTCCCCCTCACAGACCAGGTCTCCGTCATCAAGGTGAAGATTCATGAAGCCACAGGCATGCCAGCAGGGAAACAGAAGCTGCAGTACGAGGGCATTTTCATCAAGGATTCCAACTCGCTGGCTTACTACAACATGGCCAACGGTGCCGTCATCCACCTGGCGCTCAAGGAGAGAGGCGGGAGGAAGAAGTAGGAGAAGCCTGCTCTCAGGCAGCCTGTTAGGAGACGTGAAACCAGGAATGCCCTGTAGGATGCGATCACAGCGCCAAGTGGCTCGTAGAGAGTGGCTGTCGTCATCATCGTTGATCATTTGGTATTTTGCCACGGGCTAATAAACCTCTTCAACCCTTCTTGTGAAATCAGTGTCATGAGACTTGTCTCCTGGCCACCTTGCCCTGTCTGGACCTAGGACTATGGAGTATGGCACGGTGCCTGTGGCTCCTCTTCTGCTCTGAGAAATGCTGGGCTTCTAACTGAATTCTTGCCTCCATCCAGTCTTCTATGACTCTTTCTTAGGTATGTTTTTATTGCCTTTTTGAAGCACATGGATCTTCAAAAGGCATAGCCCTGTGTGTATAACAGACTAACACGGAACACCTTCAACATGCCAGGACCCCAGAAGAACACAGAGCGCTGGGCTGCAGTTCCTGGGTCAGTGGGCAGCACGCAGATGAGACCAGAGGGTGGCAGTTTGCCAGGCCAGGGCTCACTCATCACCTGATAAGTGACCTTGAGCAGGTGGCTTATGCGGAGTGAGCACAAGTGTATGATGAGGTGTTTTTTTTTTTTTTTTCAAAAATGTATTTATTTTAAAACTACTTCATTGTTCCAAGGCCATAAACTGTTTTTGTTAAACTTTATAAAATTATCCAACTATTTACTGTTTCAAGCACTTGATCAATTTTAATGAGGTAAGTGCTGTGCGGCTTGCAGGACCCTGGCTCCTGGCCAGGGATTGAACCAGGGCCAAGGCAGTGAGAGCCCAGAACCCTAACCACTAGGCCACCAGGGAACTCCCTGAGTCATGTGATCCTGATGTGGGCGTTCCTGTTTAACACGTGAGTGAACTGGGCACAGAGGCTGAATCACATGCCCACAGTCGCACAGTGAGAAGATAAAAAGAGAATGTGTGCAAAACACTTGCCACAGTCCTCGCCCCCTCGTGGGGGCCAGGCTCAGGCGGTTATTTTCAGAGTTGTGCTGTCACAGGGAGGTAGGTGCTGCTGTGCGTGGGTGTTCACAGGGAGGAAGTTGAGAGCCTGTTGATAACCATTTCCTGGTTTTCAACCTAATGTTGATTTCATTCTGAAGATCTTGTGTGTTTCCCCCCTGAGAGTTCCCAGTGCCTTTTCTTTCATTGCTTCCATTTCATCCTGAGAAGTCATTTCCCGGGCCCAGAGGGGTGAGGCCATCCCTGAAGTCACAGTGTTCTAGTCACCATTCCCTCCAC EMBV3_43439 CACCTACACCATGCCTGCCCACCTTCAGACAGGTGTAGACGATGTCAAGGGCATCTTCTT Gene GeneID:281413|PNMT:NM_177505:24_cdna Constitutive 0 NULL GeneID:281413 19 GENE PNMT NULL phenylethanolamine N-methyltransferase EMBV3_40391 CTGTAATAGCACCGGCTAAATCTGGCGAAGCCATGAACACCTGGACCTCAAGTTCACTTC Gene GeneID:510065|ACOX3:NM_001103236:4_cdna Constitutive 0 NULL GeneID:510065 6 GENE ACOX3 MGC139222 acyl-Coenzyme A oxidase 3, pristanoyl EMBV3_42801 CAGGGAACCCCAGCAAAATCCACCTTTGAAATAGGGTCAAGGAACCCCAGCAAAATCATT Gene GeneID:540328|FBXO25:NM_001076211:69_cdna Constitutive 3 NULL GeneID:540328 1 GENE FBXO25 MGC137945 F-box protein 25 EMBV3_29898 TGTCGCGGCCTGGAGCTCATTGCTTCAGAGTCTCACCCACGGCTACATGTCTGATGTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12092 GGTCCGGAGTGTGGCCTTCAGAGCGCAGGGAACAGATGACTCAAGGGACACACTCAAGGA Gene BVT0102_047955 - 1 EMBV3_40721 GK000015.2:77193644-77236629 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37789 GGTCACAAATTACCTTCACATCTAAGACCTCACTTAATATCCCCAGCGACCTGACCAGGA Gene BVV0102_344553 - 1 EMBV3_08279 GK000008.2:104587024-104797257 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226561 1 XLOC_138036 NonCoding TCONS_00226561 XLOC_138036 NonCoding NonCoding - 8:104620871-104624338 - TSS169370 2260 4 TCONS_00226561_3 55 0.324778761061947 2 0.348528563185228 2.40808827679785e-05 0 2.04734704049764e-05 7.34881273138225e-06 0.000308028125828324 0 0 2.87883805062559e-05 1.74559652483618e-05 0.000737331649842412 8.60978114335812e-05 0.000139230193868065 0.000300893651957751 0.000258095445832869 0.000123740346960942 0 0.000359961266712589 0 3.17298490131024e-05 0 0 7.88035404193958e-05 0.00023544017720547 0.000185449435269167 0 0 7.77763670375902e-06 0.000357006679455908 0.000264210986482277 5.32056972013167e-06 XM_005218393.1 SDR42E1 PREDICTED: Bos taurus short chain dehydrogenase/reductase family 42E, member 1 (SDR42E1), transcript variant X1, mRNA. 2e-15 89.7 77.59 0.0508849557522124 NM_001202515.1 CFLAR Homo sapiens CASP8 and FADD-like apoptosis regulator (CFLAR), 4e-10 71.6 75.25 0.0411504424778761 0 noncoding CTAGACAGACGTGGTCTCCACCGGGCTCTGATGGGTGGACCTCCGCCTTCCGCTTCTAGTGATTCTGTGCGCATCCTCCCCTCCTCCTTCACCCTTCCTCCTCACTCCCCATCCCCATCCTGCTGCCTTCTCTGGGCCCGGAGGCACCCTCTAGAATTAGCTCTCCCGCCCCAGGCTCCCTCGTAAACTCTCCCCGAGGGTCCCTCTCTCCCTCTGAGGAGGCGGAGCCACTGGGGACGTCCCCAGGCAGCCGTGCTGAGTGCTCTGCCCCGGGGTACAGGCTGGAGGTGCCTAGTCAGCGCTGCCGCGGCGCTGGGTCCTGCGGGCTGGGCGGGGGTGCCCGGGGCGGGTGGGGGCGGTGCTGGTGGTGAGCTGGGCTCTGGTACCACCCCACCCTCCAACCGGGGAAAGCTCGCTGGGAAACCGACATTGGCTTTACATCTGACTTGCGGTTGACCTTGGACCCTCTCGGATCTGTTTCCTCGTTAGTAAAATACGGAGATCATAACAGTACTAACCTCCAGAATGAATGCGTGCTGGCCAAAACCGCTAGGATCTAAACTCCGGTGATACTTATGGAGACGGAAGATGCTGGCGGTGACCTGCCCACGTCTGCTCGGCACTTGCCGGATCTGTTCACACCTAAGGCTTCCTAACTCACACACCTGGAACTCTGCCTGAGAGCTTGCTCTGGCTGCAGGAGCAAACTTGGCCTGCACGTGGGGATGACCAGAAAAGTCAGGGAGTTAATGCCGCAGGAGCGATCGTCAAGCACTGAAGGATGAGAACTGGTGAATGTATATCCTGACTTCCTCACTTCCCGGTGGGCAGCTTTGAGACCTTTCAGTTGTATGCCTCCTGTTGTTGCCCAGCTGGAGGGAGCCCCAGTTGCCCACAGGAGCGACCTGCTCCTCACATCCCCGATGTGGCTTCCTTCCCTCCCGAGCCAGGTCCCTGCCCCTTAGTGATGCCTCCCGGATCGGCTGCCATAGAAACTGTGTGCTCGGCGCTGGAGCTTAGTGTCTCCCGGAGTGGTCCTGGCATGGTGGTCATCATCAGCCCTGGAGGCTTTGAGAGGCACAAGCCTGGGTGGAAAACAAATCTCCCTTCCCCGAAGATCAAGTCCAAAGGATGACTCTTCCAGGAGCACTGAAGAGATAGACATCTGTCTGTCTTGTACCACCTTGGTGCTGGTACCATCTTGAAAGACTGTTTGAAATGCATCCTGAGTGAAACGACCAGGGCTGGGAATGCTGAGTGCAGGAATGAGTGAATGAGCATTGACCCACGGATCTCCCTCCACATCGCTGCTGCCTCCAGGCTCACGACAAGGAAGGCCTGGCAACACTTAGGGTTGTGGGGAAGGAGCACGTTGTTTGAACAAGGGAGTCATGATTCACAATCAAAGCAGTAATAAGAGCCCAGACATCATGAGTTCACCTGTCTAGGTCACAAATTACCTTCACATCTAAGATCTCACTTAATATCCCCAACGACCTGACCAGGAAGATTTTCTTCTAATTACTATGATTATTAGTTGTATCATCATTACCCTCATTTCATCTTACTGTAGGATGCAGCCAGCGCCTCCTGAGTCCTGACAGACATGAATAATCAATCAAGGTGTTCTCACCCACTGAGCCTCAGCTCCTTCTCCATCTAGCACTGTAGGCAGGGGCTACCAATCAACTGACATGAAAGCCGAAGCCCATTTTTCTTCCCTGGCTAGCAGCTTTCCTGACAACAATAAATTCTTATTAAATTAAATTGAAAGGCTCAAGGAAGAAGAAGCAAGCTAGGCTCTGGGCCTGTGTCTCCTGATGCCCACCCAGTCCAACACTCTGAGTGCAGACATCAGTTAGAAGGCTGCTTCATTAAGAAAGTTTCCTTCATTTCTCTAACTTAGTGAGACAGCCCCAGATACTGTGATGATACATATACACACACTGACAGATACACACACCCTTTCTCCAAGGCAGACTTCCCTTAAAACTTAAAAAAGAAAAAAATCAGAACTTTTCTGGCAGCCCAGCAGTTAAGACTCCTTCCTTCCAATGCAGGTGGTATGGGTTCGATCTCTGGTTGGAGAAATAAGATTCCATATGTCTTGCAGCCAAAGGAAAAAAAAAAAAAAAAAACCAACCCTATTCCTGTGGTGATAGTTACACAACTCTGTAAATATACCAAAAACCATTGTACATAAAGCAAGCAAATTGTATGGTGTGTAAATTACAACTCAATAAAAAATTTAAAAAGTCAC TCONS_00226558 TCONS_00226559 s 3' 77845 TCONS_00226558 TCONS_00226559 s 3' 77845 EMBV3_31276 TAGTAAAGCCTCAGTAAGTTGACGCTGCAGGTGCTAGACCCTGCTCTTGGCAGTTCAGGA Gene BVT0102_413692 + 0 NULL GK000019.2:27622204-27622772 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096140 TCONS_00096139 TCONS_00096138 TCONS_00096141 1 XLOC_057889 Coding TCONS_00096138 XLOC_057889 Coding Coding YBX2 19:27622306-27628375 j TSS71503 1809 1 TCONS_00096138_3 164 0.0574903261470426 9 0.70336189848385 0.00692700727027752 6.07624264035027e-09 3.07052065181347e-08 0.000127823516378212 7.99948907547256e-11 3.37365125045166e-09 3.04284482236863e-09 1.67672953352445e-10 0.00181785860231474 7.36425623329349e-05 1.84019585905018e-08 0.000235092665012022 1.86021792976462e-05 0.000973294480462596 1.47000886815238e-12 0.000304783569253871 3.11370231112038e-09 4.50393226873984e-09 0.000683661212373356 2.14631753335432e-08 1.17786924969596e-05 9.26683552782205e-10 2.28215850535873e-09 2.91763571159483e-10 4.87938399173738e-09 0.000102454103469429 1.35429564864119e-11 3.67847772449353e-05 1.14075089386446e-08 1.43162661262878e-05 NM_001098126.2 YBX2 Bos taurus Y box binding protein 2 (YBX2), mRNA. 0.0 2232 100.00 0.683250414593698 NM_016875.2 Ybx2 Mus musculus Y box protein 2 (Ybx2), mRNA. 0.0 1631 89.34 0.679933665008292 TCONS_00096138_3 sp|Q9Y2T7|YBOX2_HUMAN YBOX2_HUMAN Y-box-binding protein 2; 6e-73 227 86.47 0.99390243902439 0 coding 0 0 0 0 -0.102777370822329 0.588423654151249 0.049269798094402 0.382168651323516 GTGGAGCCCGGCGGGGTCCGGAAAGCCGAAGGCCGGTACGGCTCGAGGCTCAAAGGACCAGCGGACCGTAGTGAGTTTCCCTGGTGGGAAATTCTGCAGTGTCTTCCTGGCAATCCAAGTCCTGGGCACTGTCAAATGGTTCAACGTGCGGAATGGTTACGGATTCATCAACAGGAATGACACCAAGGAGGATGTTTTTGTTCACCAGACAGCTATTAAGAGAAACAACCCCAGGAAGTTTCTGCGCAGCGTTGGGGATGGGGAGACCGTGGAGTTCGATGTCGTGGAAGGAGAGAAGGGCGCAGAAGCTGCTAACGTAACTGGGCCTGGGGGAGTGCCAGTGAAGGGCAGCCGCTATGCCCCCAACCGACGCAGGTTCCGCCGATTCATCCCCCGGCCCCGCCCAGCTGCCCCGCCACCCATGGTGGCAGAGGCTCCATCGGGTGGAACAGAGCCAGGCAGCGAAGGGGAGCGTGCCGAAGACTCCGGGCAGCGGCCCAGACGACGGCGCCCACCACCCTTCTTCTACCGACGGCGCTTCGTGCGAGGCCCTCGGCCCCCCAACCAGCAGCAGCCTATAGAGGGCACAGACGGGGTAGAACCCAAAGAGACAGCCCCGTTGGAGGGAGACCAGCAGCAGGGGGATGAGCGGATACCCCCACCCAGATTCCGGCCCAGGTACCGAAGGCCTTTCCGCCCCAGGCCACCCCAACAACCCACCACAGAAGGTGGGGATGGCGAGACCAAGCCCAGCCAAGGCCCCACTGATGGCTCCCGACCTGAGCCCCAGCGTCCACGAAACCGCCCCTACTTCCAGCGGAGACGGCAGCAGCCCCCGGGACCCAGGCAGTCCACAGCCCCAGAGACCTCAGCCCCCATCAACAGTGGGGACCCCCCAACCACCATACTGGAGTGATTCCAACTCAAAGGACACCCAGAGCCACCGTCTGGTATCTGCCAGTTTTTCCAACTGACCTGTATTCTACCCAACACCTCCCTCCCCTCTTTCCCATAATTTGTGACATCAAAACACCGGCTTTTCCCCCCATTCCTTGAGACTCAGGAGGGCCAAAGCAACAGCCTTTTGCTTTTTTTTTTTTTTTTCCTTTCTCCCTTACCAAGGGTTGAAGGAAGGGATCCATCCTTATTGTTCAGAGGCATCAACTCCCTCCCCTAAATCAGGCTGAGAAGGAACCAGCCAGCTCTTCCCTCCTCCTGGTTGTTTTTCTTTCCCACCCCAGTTTATTTTTTGTTTCCCTGCTCCCCCTACCTCTGAAGCCATTTTATGAACTGTCATGTGCCACCTGAGCCTCCAGTAAAAACAAAAACGGGCTTTCCTGTTGTCTTGGTCTCTGCCTCTTTTCTGTTCAGAGCCTTGTTGGTAATGCACTGTTGAGGGTGGCAGGAGGGAGAGGGGTTCGTAGGCAGGGCCTACTCTCGGATCCTTGTTCCCACGGTTCTAGCTGTGCAGCTCTGCAGAAGTGCCTTCATCCCTGGGACACTGACTTTTCCCATCTGTGAAATGGGACTGTTGCCTCCCTGGTAGAATGAGTGATTCCTGAACTGCCAAGAGCAGGGTCTAGCACCTGCAGCGTCAACTTACTGAGGCTTTACTACTGTTAACAAAGGCAATGATTCCAGATCTTAAGTGGAGGCATGAGTGACAGCATCCAGTCCAGAGGATTCTGTGGCCTGGAACTGAGGCAGGATGGAGAAGAGGCGGGGGTGGGGAGGCTGTGGTCTGGGTCTCAGCCCGTCTTGGAGTGCCTCCACACAACAGCATGCATATCTCATACAGTAACTTTATAT EMBV3_06664 AGCACGGTTCCAACAGGAGGAGGGATCACAGGAACGTCAGGATAAAGCAGCCAGACTATA Gene GeneID:781720|MRPL23:XM_002690417:104_cdna Constitutive 0 NULL GeneID:781720 10 GENE MRPL23 NULL mitochondrial ribosomal protein L23 EMBV3_38305 GTCAACTACACACAAGTAGTCTTTGCAGCCCCTGGAGATCGAAGAAATGACTCTGTCCTG Gene GeneID:616928|LOC616928:XM_002693869:133_cdna Constitutive 0 NULL GeneID:616928 16 GENE LOC616928 NULL hypothetical LOC616928 EMBV3_25126 GTCTAACAGTCTGAATGAATCCATTTTCAGAAAGCTACTCTTTTACAAGATCCCCTATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18818 TGGTTAAGAATCTGCCTTCTAATCCAGGGGATGAGGGTTTGGTCCCTGGTTGGGGAACTA Gene BVV0102_223051 + 0 NULL GK000018.2:42750805-42959282 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10366 ACAGAAGGGCCATTTCTTTGTGGAGGATCAGATCTACTGTGAAAAGCATGCCCGGGAACG Gene GeneID:614675|PDLIM1:NM_001035455:228_cdna Constitutive 1 NULL GeneID:614675 26 GENE PDLIM1 NULL PDZ and LIM domain 1 EMBV3_08515 TAAGCTGCCTCATTCTTCCATCCTCAGAACGCAAAAAGTAGAGAATGGAGACCAGCGGTA Variant GeneID:508288|THAP9:XM_002688390:51_cdna 875^934 1 EMBV3_32715 GeneID:508288 6 GENE THAP9 NULL THAP domain containing 9 EMBV3_35266 TTGGCTGCAGGAAAGGGCCCCTCCAGGTGCCTGCTACCTCAAGTGCCTGCAGTTGCTTAA Gene GeneID:783291|ITPRIPL2:XM_002698040:265_cdna Constitutive 0 NULL GeneID:783291 25 GENE ITPRIPL2 NULL inositol 1,4,5-triphosphate receptor interacting protein-like 2 EMBV3_24213 GCACCTACAGAGATGCCAACATTAAATCACCAGCCCTTGCCTTTTCTCTTGCAGCGACGG Gene GeneID:493722|QKI:NM_001007817:2_cdna Constitutive 0 NULL GeneID:493722 9 GENE QKI BqkI quaking homolog, KH domain RNA binding (mouse) EMBV3_01911 GACCCTTAAGATCCCGACGGCCTAGCTTTTATGTCCTATATTCTTGACACTTTCTCCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07183 TTCTGCATGCCACTGTGCAGATTCTTTTCACCATGGACTTGACCTTCTGTGGTCCCAACG Gene GeneID:618523|LOC618523:XM_002692861:14_cdna Constitutive 0 NULL GeneID:618523 15 GENE LOC618523 NULL similar to olfactory receptor 1231 EMBV3_30401 GGCTCAGCTACAAACCAGCATCTTAGTGCCAGTGTATCCTACTAACAAGCCTCACCAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26564 ACACGGATGAGGCAAAGAGACATTTCAGGATACTGACAACCCACCAATGTTATTAGCTCC Gene BVV0102_284183 + 0 NULL GK000003.2:43331259-43332800 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169707 TCONS_00169704 TCONS_00169706 TCONS_00169702 TCONS_00169703 TCONS_00169701 TCONS_00169709 TCONS_00169700 TCONS_00169708 1 XLOC_103424 Coding TCONS_00169701 XLOC_103424 Coding Coding SASS6 3:43291115-43332670 = TSS126981 4281 1 TCONS_00169701_2 738 17 0.897386533185734 0.000503125410238416 7.40104694928529e-14 0.000746024098869824 0.00109587510483717 0.00150498577741327 2.56291998231151e-05 0.000364709528453299 0.000934207318457139 0.000599776977223217 0.000213910804176776 0.000110254180134759 4.86886527170308e-08 3.36476461212928e-12 0.000403371013964153 0.000542707680584151 0.00291308281323334 0.0016046800428485 1.50205021479116e-10 5.25024600706225e-05 0.000971616298855974 1.26219933516766e-07 0.00103989429860799 3.80332279221607e-27 0.000116949698828227 0.000610773400404986 1.00421200919654e-05 9.29081927457806e-05 3.62544318035097e-19 1.25505318468828e-05 0.000150628987077099 NM_001192026.1 SASS6 Bos taurus spindle assembly 6 homolog (C. elegans) (SASS6), mRNA. 0.0 5218 100.00 0.675543097407148 NM_194292.1 SASS6 Homo sapiens spindle assembly 6 homolog (C. elegans) (SASS6), mRNA. 0.0 3469 81.65 0.839056295258117 TCONS_00169701_2 sp|Q6UVJ0|SAS6_HUMAN SAS6_HUMAN Spindle assembly abnormal protein 6 homolog; 0.0 1187 92.24 0.888888888888889 0 coding 0 1 0 0 2.85487103931792 0.0233148748139788 0.025737372434578 0.60908378061846 AAAGTTCTCAGATTCACTCCTGTCCCGTTCCCGTAACAAATATGGCTGCGTCAGGTCCTTCCACGCAGGAGAATGCCATACCCGGAACTTTACCATCCCAGCTTCGTAAAACCGGAAGAAGTTGATGGTGGCCGGCGAGGTCCAAACCTCCTTTGTATTTCCTCTGTTTCTCTTTCTCCGCTTTCTCCGCCTCCTCCGCGGAAGCAGAGCGGCAAACTCAAACTTTACAGGACCCGGAAGTCTTTCAGCCTAATATCGCGGGCCGGGCCTGTTGTGTTTTATTTTTTCGCACACCGGCCAGGGCAGCGGTTCAGCATGAGCCAGATTTTGTTCCAGCAACTCGTCCCGTTGCAGGTGAAATGCAGAGACTGCGAGGAGAGGAGAGTGAGTATTAGACTGAGCATTGAACTACAATCAGTTTCTAACCCCGTTCACAGAAAGGATTTAGTTATCCGTCTGACTGATGATGCGGATCCATTTTTTCTGTATAACCTTGTTATTTCAGAGGAAGATTTTCAGAGTTTAAAATTCCAGCAAGGTCTTCTGGTAGACTTCTTAGCTTTCCCACAAAAATTCATAGATCTCCTCCAGCAGTGTACTCAAGAATACGCGAAAGAAATTCCAAGGTTTTTGCTGCAGTTAGTTTCTACAGAAGCTATTTTGGATAACTCACCTGCTCTTTTAAATGTGGTAGAGACAAATCCTTTTAAGCATCTGACACACCTCTCACTAAAACTTTTACCTGGAAATGATGTGGAAATAAAGAAGTTTCTAGCAGACTGTTTGAAATGTAGTAAGGAAGAAAAATTATCATTAACACAATCGCTGGATGATGTTACCAGGCAACTGAATTTCACCCAAAAGACATTATCAGAAAAGATCCAAGAATTAGATAAGTTACGGAATGAATGGGCGTCGCACACAGCAACATTGTCAAATAAGCATTCTCAGGAACTAACGAATGAGAAGGAAAAAGCTTTGCAGGCCCAGGTTCAATACCAACAGCAACATGAACAACAGAAGAAAGATTTAGAAATCCTTCATCAACGGAACATGCAGCAGCTACAGAACAGATTGTCTGAGTTAGAAACGGCTAATAAAGACCTCACTGAAAGGAAATACAAAGGAGACTCCACCATCAGAGAACTTAAAGCAAAGCTGTCTGGTGTTGAAGAGGAGCTCCAGCGGGCTAAGCAAGAAGTCCTCTCTTTGAGAAGAGAAAATTCTACACTCGATGCTGAATGCCATGAAAAAGAAAAGCATATTAATCAGCTACAAACAAAAGTGGCTGTTTTAGAACAGGAAATCAAGGATAAGGACCAGCTTGTTTTAAGAACAAAAGAAGCGTTTGATACAATCCAGGAACAAAAGGTGGCTCTGGAAGAAAATGGTGAGAAAAATCAGGTACAACTAGGAAAACTTGAAGCTACAATAAAATCATTATCAGCTGAACTTCTTAAGGCAAATGAAATTATCAAAAAACTGCAAGGGGATCTGAAGACTTTAATGGGTAAGTTGAAATTGAAGAATACAGTAACTATTCAGCAAGAGAAACTCTTGGCTGAAAAGGAAGAAAAATTACAAAAGGAACAAAAAGAATTACAAGATGTTGGACAGTCTCTCCGAATTAAAGAACAAGAGGTATGCAAATTACAAGAACAATTAGAAGCTACAGTTCAAAAACTTGAAGAAAGCAAACAACTTCTAAAAAATAATGAAAAGTTAATCACATGGTTAAATAAAGAATTAAATGAAAATCAGCTAGTGAGAAAGCAAGATGTATTGGGACCTTCTACCACTCCACCTGTACATTCCAGTAGCAACACCATCAGAAGTGGAATTTCTCCTACCTCAAATGTGGTTGAGGGTAGACTGACTTACCCAGCTTGTGGGATTGGTTATCCTGTCTCCTCTGCGTTTGCATTCCAGAATACCTTTTCTCATCCTATATCTGCCAAAAATAGCATCCACACAGTTTCAGGACCAAAGGTTCAGTTTAACTTGCAGTTTACAAAACCAAATCCATCACTAGGAGATGTTCAGTCAGGAACAACTATTAGTATGCCCTGCTCAACTGATAAGGAAAATGGTGAAAATTTAGGACTGGAATCCATATATCTGAAGAAAAGGGAAGATAGCATTCCTTTGCGTGGACTCAGCCAAAATCTATTTAATAATCCAGACCATCAGAAAGATGGCACTTTAGGAGCATTACAGACATCTTCAAAACTCACAGTGCTCCCTTCTGCATCTTCAGCTTACTTTCCCGGGCAGCTACAGAACAGTTAATCCTAGTGTCGTCTGTTGTTTTTTTTTGAAATTTTAGAAATTGACATGGCTTAAAAATATGGTAACAGCATATAGCTCAAATTCTGAACACGCAGGTTTCAGGGTTTACTTGAGTTACTGCTGTATTAGATTGGATCCTTTACTGCCATCATTTATGCAGTTTAGAGGAGCAAATCTGTACTTGGAAATTGGTGAAGATTCTGAACAAATGACACTTTTTAGTTTGGAATGTGGTGTTTTATAGAATAATATGAATTTTATTAAACTAATCCTTAGAACTTCTGAGAATTTCTAAGGAAAGAATTGATCCTTGTAAGGGAGAGCCTGATCATTGAGTATCTTAGTTCATTAAAACCTGCTCAGACATATTAATATTTTAATGAAGCCAAAGAATGCTATCAGTTCACTTTATCATTTTCATTAGTACAATAAAATTTTAAATTTTCCACCTGAGAATTATGAAGGAAAATGATTATCTCTTGAAATATATTATTGATGATATTTAAAGGGAAAAATCCTGAAATTACCTTAAATGAATGAAATTCTTCATAGCAAGTAAATATTTTCCTTGAACCCTTTAAATTATCTTTTGAGTAAGTCTATAATTTTAATATATTATACAAACAATTTTGGACAGTCTAATTACATGACCAGATTAGGTACAAAGTGCTTTAAGTCATTTGAGCCAGTTAATAGGATTTTAATACTTCCTGGAAGCCTGTAGTCATCCAGTTGTTCTCTTTCATTTGAAGTTTTGTTATTCACTTAAATCTGTATTAGTGGAATATTGTTTTAAAAATTAGTACTTACACAAAATATTTACAAGAGCATAATGAATATTAATTTTTATAATATCAAAATAGGTTCATTTTCATGTTGGCTTAGTAAAGTAGGCAAGGTGAATAATTTTAGAAGTGACAGCTTTCTTTTCTTCCCTATAATTAAAAGTTTCAGGTAAGAATTTGTTCCTTGGAAAAAATGAGGTGATTTAAAAAAAACTTATCACAATCACAGGGCTCCATTTTGTTTTCTTAACAGCCATCCAGTAGAGTAGCATTCTCTTAAGAAACCTTTAAAGCATTTTTTGTTTATAGAGTGTTAATGCTCTTGTGATACTTTTTCAAAATATTTTCAAGAATGTTATTACACAGATGAGGCAAAGAGACATTTCAGGATACTGACAACCCACCAATGTTATTAGCTCCATAGTAAACTAGAGAATCTTTGCTAATTCTTTTGTGAAGCCACAATATTGAGTCTTTTCACACTTTGAAACTGCTGGGAATTGCAAACTGTCTTAAAATAGGGATCTATTGTAAAAAAAAAAAAAAGCTTAGTAACCATTATTAGTTTTTATACAGTTTTTTGGTGTGTGTCATTTAGATATACTAGATTAGTAAGAATACTCAGTTACAGTAACTTGAAAACACTAATTTGGAAAGCAACTTCTCGGCAATATTGGACTCTACATTGTAAATACTGTGTAATATAAAACGTTGTGACAAGGGTTTAGATAGGATATATGACATAAGGATACAACAGCTAGGATAGAGATCATTTTGATGTCAACTTCGTAAAGACTTTTTGGTATTAAGTACAGACTTCTGAGTGTGCTAATTATTTTCTCTACCTCTTAAACTTTTATTTGAAATTGTTCTGCTGTGTACAATTGTACATGTGTTAATAATCAAAATACTGCATTTAATGTATTTCTGTAAACTGAGCTTTGTTTTAATAAAGTATTAATATTTTGGGAATATGACATACTTAAATGTGTATAAAAACAGAAATAGGACCGACCTATAACACCTGCACCTGTGCTTAGAAAATTATTTTCAGTTAATTTATGGACTAAGTTTTCATTGCTTTGCTTCCTATAACAACAGTATTGAGGGAAATGAAATGGATTCAAAGGGAGAAGATATTGTTACTGTAAAAGTACAGTAACAAAGCCAAAACAGGCCTTATAAGGGAATCACAGATCAAGACTTT EMBV3_39676 CAAGTCCTCCAGCCTGGATGCCCTGGGTCCTGCTCTGTTCCTGGAACCCGTGCCTGTACA Variant GeneID:616380|C28H1orf198:NM_001040592:108_cdna 398^757 1 EMBV3_43156 GeneID:616380 28 GENE C28H1orf198 C1orf198 FLJ14525 chromosome 1 open reading frame 198 ortholog EMBV3_26109 CTGTCTGGAGGAGTGGCTGTAATCTCTTTGGGGGCATGGGTTTTCTTTGCACATCGTCTT Gene BVV0101_073601 - 1 EMBV3_42389 GK000011.2:21132093-21147965 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118983 TCONS_00118987 1 XLOC_072795 NonCoding TCONS_00118983 XLOC_072795 NonCoding NonCoding LOC100335190 21:28286176-28310751 j TSS89229 1129 1 TCONS_00118983_1 59 0.613817537643933 2 0.954138520387401 0.000301277207224476 6.1899379303545e-05 2.87511624808891e-05 5.37828262717813e-13 7.84672704567805e-14 1.00637412480766e-05 2.48119029064295e-14 2.36692362847849e-13 4.82855305760839e-05 0.000252154452096867 0.000182762221033934 6.00193448308577e-05 3.16787421523142e-12 4.95961814575624e-14 0 0.000393938689325465 0.000304297130650874 5.0651956161532e-13 3.41185331069385e-19 5.79557812802142e-05 2.44431341800243e-13 4.39402239585277e-05 7.79409636619536e-05 4.27112324813466e-13 4.24439472458305e-05 5.66085778960485e-05 7.58123366707729e-14 5.88366474438199e-05 1.13365422188932e-13 1.9702276203273e-13 XR_229176.1 LOC100335190 PREDICTED: Bos taurus uncharacterized LOC100335190 (LOC100335190), 0.0 1645 99.89 0.809565987599646 NM_006791.3 MORF4L1 Homo sapiens mortality factor 4 like 1 (MORF4L1), transcript 4e-51 206 81.33 0.194862710363153 0 noncoding 0 0 1 0 -1.9576423734419 0.00440849576563163 0.033524210832424 0.544455975985398 GACCAGCGGTTGCCTGGGTTGAGGAGATGGGCTCTGCGGGCGGTGGCAAATCCGGCCTAGTATGTGAAGTTGGCGGTGCCTGATGGCGCCTCTGACACGAAGCTGGGTGGGGTAGAGTAGAGGGTGGTAGTTGCGGCAGGTGGGAGAAGGAGGGAGGCGGCGGTGAATCACTTATAAATGACTCCGAAGCAGGACCTGGAGACTAAATTCCAGGAGGATGACACAGATTCACATCAAGATAAAGATGATGTGCAAAGAAAACCCATGCCCCCAAAGAGATTACAGCCACTCCTCCAGACAGATCCAGCAGGAATAACCACAAAAGTCACCTTGGGGCCACTTAATAGAACAGGGTGAGAGCTCCATGACCCCAACTAGGTAGGGTCTGTGAGTCCCATGTCAGCATTAAAGAAGTTACAGAAGACTGCCGTCTGTCCCTTATCACCCCAATAAAGGTTTCTTGGGGTTCACGTCTCAAGGAAAATTTGAAGTAGGAGATAGATGGTTCCTGGGCTGAACAGCTGGTGATTTTCAAACGGAGCAAAACTGAAGTTTGTCCTCAGCCAGACAAGAATGACGTATTTCCCTTCCTCCATTGTTAGGAGGGAATAAACTGATGGGGGAATTGTGCAGTGAAAAGGAAAAAAGAGGAATGAGTTTTTGTTTTTCACTGCTCTGAGAGCAAAGAAGATAAAGAACAGTGAGCAGGCCTGAACATTCCTAGTTTGTTTTACTTTAACTGCTCCTGGTTCTGAATGTCTGTAACTAAGTTTGCTTTTCTGCACCCTAACTCTGCAGGAGCCACACTTCACTTGACTCTGTGCTAAATACATCCTCTATCTGATGTTTACAACAGCCTTCCCCTTGTAGTTACATGTCAGAAAGAAGGCCTCAGAGCCACCAGACTGCCCAATGCAGTTACGGGTTACTGATGCCAGTTTATGACTGCCTTTGAAATGATGCAAGAGGAAGAAATCATGGTCCTGTCACCTTTGTTTCCTCATCACCGGCTCCTGACTCCTCCTGACTGTGAGCACCTGCCTTAGGGACACAGTTGTTGAGGCAGGAGCATGCTGTGTTCCCCTCTCCACTACCTGAGAATAAAAGCCACTATTCTGTTTCTTCCAAA EMBV3_01095 CTAGCTGTGCTCATGAAAGGCAATCCTCGGGTCCAGAATGGGAAACCAGTCATCCTCCTT Gene GeneID:506561|AAAS:NM_001075269:21_cdna Constitutive 0 NULL GeneID:506561 5 GENE AAAS MGC143228 achalasia, adrenocortical insufficiency, alacrimia (Allgrove, triple-A) EMBV3_24173 CAACAGAACCATATCGGGAGTGTGATTAAGGGTACCCCTTGTGCTGAGCAAATTAAGGAG Variant GeneID:512466|BCCIP:NM_001046122:33_cdna 310^399 3 EMBV3_31890 GeneID:512466 26 GENE BCCIP MGC134343 BRCA2 and CDKN1A interacting protein EMBV3_10568 TATTTGCTTTCCTGCTGAAGTGAGGCAGAAGAATGAGCTGGTGAGGCCCGTTGACCAGAG Gene GeneID:100300553|LOC100300553:XM_002687152:17_cdna Constitutive 0 NULL GeneID:100300553 5 GENE LOC100300553 NULL hypothetical protein LOC100300553 EMBV3_34465 AGTAACTTTAACCAAGGTCACACAGTGGAAAGCTATGGCAGAAACTTTGGCCTGCCAGAC Gene BVT0101_046379 + 0 NULL GK000002.2:128797937-128847983 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106791 TCONS_00106790 TCONS_00106788 TCONS_00106792 TCONS_00106789 1 XLOC_062892 Coding TCONS_00106791 XLOC_062892 Coding Coding SRRM1 2:128845642-128877300 j TSS78524 3416 1 TCONS_00106791_2 915 0.0398126463700234 20 0.892725147676659 0.00045501549487806 8.59232586351875e-05 0.000192334962876043 7.94371381995721e-10 2.02218503787201e-39 1.71139978501555e-21 2.04599809175953e-10 1.26030970045025e-24 5.78478133076547e-75 2.87648396515706e-27 1.11935247193731e-06 1.43221916410567e-74 1.13250615680494e-06 9.08408495292113e-05 1.07083989133493e-131 0.00176535244121608 0.00555561545874923 3.93359504937982e-10 4.9285996842885e-05 9.70819904889233e-08 1.20774496089751e-119 0.000300220855293597 8.32801553146745e-51 0.00221152477629604 0.000640338566521222 0.00159776112110757 0.00122958392516223 0.000218435007535269 0.000257212534605963 8.27357609037269e-06 XM_005197596.1 SRRM1 PREDICTED: Bos taurus serine/arginine repetitive matrix 1 (SRRM1), 0.0 5122 100.00 0.831088992974239 XM_005245717.1 SRRM1 PREDICTED: Homo sapiens serine/arginine repetitive matrix 1 (SRRM1), transcript variant X1, mRNA. 0.0 4231 92.95 0.831088992974239 TCONS_00106791_2 sp|Q8IYB3|SRRM1_HUMAN SRRM1_HUMAN Serine/arginine repetitive matrix protein 1; 7e-135 431 100.00 0.268852459016393 1 coding 0 0 0 0 -0.194808270725564 0.117086167342218 0.0547823892291127 0.309685670930281 CCGGCGCTCGGCTTTCCCTGCCGGTCCCGCCCTCCGTCGCGGCGGCGCGGTGCACCTTGGGATAGGGAGCGATCTCCGAGCGAGGCAGCAAGATGGACGCGGGATTCTTCCGCGGAACAAGTGCAGAACAGGATAATCGGTTCAGCAACAAACAGAAGAAGCTACTGAAGCAGCTGAAATTCGCAGAATGCCTAGAAAAAAAGGTGGACATGAGCAAAGTAAATTTGGAGGTTATAAAGCCTTGGATAACAAAACGAGTAACGGAAATCCTTGGGTTTGAAGATGATGTTGTGATTGAGTTTATATTCAACCAGCTGGAAGTGAAGAATCCAGATTCGAAAATGATGCAAATCAACCTGACCGGGTTTTTGAATGGAAAAAATGCTAGAGAATTTATGGGAGAACTGTGGCCCCTACTCTTAAGTGCACAAGAAAACATCGCTGGGATCCCTTCTGCTTTCCTAGAACTGAAGAAGGAAGAAATAAAACAGAGACAGATTGAACAAGAAAAGTTGGCATCTATGAAAAAGCAAGATGAAGACAAGGATAAGAGGGATAAAGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGTCTCGAAGCCCAAGAAGACGCAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCTCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTCGATCTCCCCGTCACAGAACCAAAAGCCGGAGTCCTTCCCCTGCTCCAGAGAAGAAGGAAAAAACTCCAGAGCTCCCCGAGCCATCAGTGAAAGTAAAAGAACCTTCAGTACAAGAGGCCACTTCTACGAGTGACATCCTGAAAGTTCCCAAGACTGAACCAGTACTAGAGCCTAAAGAACCTTCTCCAGAGAAAAACTCCAAAAAGGAAAAGGAAAAGACCCGACCAAGATCTCGGTCACGTTCCAAGTCAAGATCCAGGACACGTTCTCGCTCTCCTTCTCATACTAGACCAAGAAAGCGCCATAGATCTCGATCAAGATCATACTCACCTAGAAGGCGGCCAAGCCCAAGAAGACGGCCATCTCCTCGAAGAAGAACCCCGCCGAGACGAATGCCTCCTCCACCAAGGCACAGGAGGAGTAGATCTCCAGTGAGACGAAGAAGGCGTTCATCGGCATCCTTGTCTGGGAGTAGTTCATCATCATCTTCATCTCGTTCCCGGTCACCGCCAAAGAAGCCTCCGAAGAGGACATCCAGCCCTCCTCGAAAAACTCGTAGGTTATCTCCTTCAGCAAGTCCTCCGAGGCGAAGGCATAGGCCATCACCTCCAGCTACTCCGCCGCCAAAAACTCGTCATTCCCCAACACCCCAGCAGTCAAACCGTACAAGGAAAAGTCGTGTTTCTGTCTCTCCAGGGAGAACTTCAGGTAAAGTGACAAAACATAAAGGTACTGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTCGGAAAGTAGAGTTGTCTGAATCGGAAGAAGATAAAGGTGGCAAAATGGCTGCAGCAGATTCTGTGCAGCAGAGACGCCAGTATAGACGACAGAACCAGCAGTCTTCATCTGATTCTGGCTCCTCCTCTTCCTCAGAAGATGAACGACCCAAAAGGTCCCATGTGAAGAATGGTGAGGTAGGCAGGCGACGGAGACATTCCCCTTCCCGGAGTGCCTCTCCATCACCTCGAAAGCGCCAGAAAGAGGCTTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAATGACTAAAAGTGGTAGACGGAGGAGAAGTCCCTCCCCACCTCCCGCCAGAAGGCGACGTTCTCCTTCTCCTGCTCCTCCACCTCGTCGACGCAGGTCTCCCACACCACCACCACGACGAAGGACTCCGTCTCCTCCTCCACGCCGTCGCTCACCTTCCCCAAGAAGATACTCTCCTCCGATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAGAACGGCTTCGCCCCCTCCCCCTCCTAAACGAAGGGCATCACCATCTCCACCACCAAAGCGTCGGGTCTCCCATTCACCACCTCCCAAACAAAGAAGCTCCCCAGTCACCAAGAGACGTTCGCCTTCATTGTCATCAAAGCATAGGAAAGGGTCTTCCCCGAGCCGATCTGCCCGGGAGGCCCGGTCACCACAGCCAAACAAACGGCATTCGCCCTCACCACGGCCTCGCGCTCCTCAGACCTCAAGTCCTCCACCTGCTCGAAGAGGAGCATCATTGTCACCCCAAAGAAGGCAGTCCCCATCTCCAAGTTCTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCCAAAAAGATAAAAAAAGCTGCCTCACCAAGCCCTCAGTCGGTAAGGAGGGTCTCATCTTCCCGATCTGTCTCGGGATCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCGTCACCTGTCCAGTCTCAGTCACCCTCCACCAACTGGTCACCAGCGGTACCGGTTAAAAAGGCTAAAAGCCCAACACCAAGCCCATCACCGGCAAGGAATTCAGACCCAGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAAGAAGCACAAGAAGCACAAAAAACACAAGAAGGAGAAGGCTGTAGCTGCCGCTGCTGCAGCCGCTGTGACCCCTGCAGCTGTAGCTGCTCCCACAACCACATCAGCACAGGAAGAACCGGAGGCAGAGCCAGAGCCTAAGAAGGAGACTGAAAGTGAGCCTGAAGATAACCTTGATGACTTAGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAATGCGGAAGGCTCAAGTGTCCCCACAGTCCTAGCAGGCTTTCCTTCCTCCACTTGACTGAAGTGCTTGTTAAGGGACTTGGTCTTGCTTGTGACTGTCCCCAGTGCCTAGTAGGCTGTAGAGGCACAAATACTGGATGAACAGATGGGAAAGAAGTTTAATTGACTGTCATTTGCCGGACATTGCTGGGGCTCGAGGTGAGGAACGCGAAGACATGGTGACTCCTGCCAGCTATCTAGGATTTGCCTCCTGGGGATAAAAACATACAATCTGGAGTGGGCAAGAACATAAGTCTGGCAGGCCAAAGTTTCTGCCATAGCTTTCCACTGTGTGACCTTGGTTAAAGTTACTTAACATCTAAGTGCTTCCCTTTCTTGGATCTGAGTCAAATAATGGAACAACCTCCGTTTTTAAAGAGTTTAATGTGTTAGTTAATACATATAAAGTAACGATAGTACAAAGCGAGGTCCCCATTTTCTTAGGTAACATAATATGTGCTCATTCTGTTAACTATGACAAGTTTTAGTTTGGCTGTCTGAAAGGGATTTTAATCGTCTCTTTACAATGTAATTTTTTCTTTAAATAAAATTCACCATTTTAAAGTGTGCAG EMBV3_05682 GATGACACCAACACTGCCCCAGACTGCTTGCCTGAGAAAACTCAAGGCTGCCAAAGATTT Gene BVT0101_057852 - 1 EMBV3_39674 GK000021.2:31140269-31178543 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43097 TGATGGAGGAGACCATGAAGGAGGTGAAGGCCTACAAGGAGGAGCTGGAGGGACAGCTAG Gene GeneID:281004|APOE:NM_173991:26_cdna Constitutive 2 NULL GeneID:281004 18 GENE APOE NULL apolipoprotein E EMBV3_25586 GGAACCAGCAGCCAATATGCAGGCTCCAGGGCCAGGAAGCAGTGCAGCAGTATTAATAAA Gene GeneID:281298|MC1R:NM_174108:29_cdna Constitutive 0 NULL GeneID:281298 18 GENE MC1R MC1-R MSHR melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) EMBV3_14687 GAACCCGGTCGGGGAAGAGGGGCGCCGCAGGAGCTCTGGGGCCCCAGGAACATGGACACT Variant GeneID:533996|PHLDB1:XM_002693125:553_cdna 243^356 1 EMBV3_07040 GeneID:533996 15 GENE PHLDB1 NULL pleckstrin homology-like domain, family B, member 1 EMBV3_30164 AAGGCTGTCCTAGGTATACGGTTGACGGCTTACGTTTTAGTTTCCGCGTCAGCCTCTGGA Gene GeneID:529698|INVS:NM_001077983:63_cdna Constitutive 0 NULL GeneID:529698 8 GENE INVS MGC140477 inversin EMBV3_34955 CACTGTTCCACAAAGCAGCCTCTTGGAGACTTGGAGGGAGTGCAGGGACCTTCTGAGCAT Gene GeneID:505370|PRKAR1B:NM_001075201:83_cdna Constitutive 0 NULL GeneID:505370 25 GENE PRKAR1B MGC140768 protein kinase, cAMP-dependent, regulatory, type I, beta EMBV3_11689 GAATGTCACTACTGCCACTCACCACCTTTGGCAAATGCCTTGTGCACACACCCAGCAAAT Gene GeneID:512672|LOC512672:NM_001076841:93_cdna Constitutive 0 NULL GeneID:512672 23 GENE LOC512672 MGC151529 major histocompatibility complex, class I EMBV3_19440 AAGAGGGGAGGCAGCCAATCCATCATGTGGTGATGATGCTGGACAGACAGGCCTTCAAAA Gene GeneID:511191|GOLGA1:XM_002691583:115_cdna Constitutive 0 NULL GeneID:511191 11 GENE GOLGA1 NULL golgi autoantigen, golgin subfamily a, 1 EMBV3_22374 GGGCCATGCATTTCATATAGTAGAAGCACAGAAACAGGGATTACTAGAACTTGGACACGA Gene BVT0102_157664 - 1 EMBV3_41931 GK000011.2:96038737-96044188 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32200 TGGACTTCATGCTTAATTCAACCATCGACAGCTTCCAAGTTGCATAGTATTCTAAGGAGC Gene GeneID:617437|RGS4:NM_001046600:344_cdna Constitutive 2 NULL GeneID:617437 3 GENE RGS4 MGC137562 regulator of G-protein signaling 4 EMBV3_03400 GTGTATCCCGCGGTGGCAGGTAGATTCTTTACCAATGAGCCACCAGCAAAGCCCCTTTTA Gene BVV0102_161350 + 0 NULL GK000006.2:108863734-108898925 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36465 GTTCTTGCACATTCTGATGTCTTCTCACCTTGCCACTCTTCCTACTGGGCCCTCTTTCAG Gene BVV0102_269756 - 1 EMBV3_33457 GK000023.2:14998188-15000259 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134178 TCONS_00134176 TCONS_00134177 TCONS_00134173 TCONS_00134175 TCONS_00134174 1 XLOC_081323 Coding TCONS_00134177 XLOC_081323 Coding Coding C23H6orf130 23:14998263-15006107 j TSS100080 3226 1 TCONS_00134177_2 152 0.0632362058276503 6 0.589442815249267 0.00123320860367467 0.00056787327593117 0.000951634643370175 0.000376935569350757 0.000255508017721622 3.36365742279619e-05 0.000412694523814759 0.000290440989194516 0.000988043009740276 4.45041646295121e-05 3.90141920897847e-05 1.04197787186111e-05 9.63469163571746e-05 0.000492669780827755 0.00020483328623072 6.39701288003847e-05 3.03218571507194e-05 3.39783109500266e-05 0.00084876806761118 0.00103045773286493 0.000270010058777805 0.000165730343196449 0.000228996624357865 1.25976938059396e-05 0.000841826556648722 0.000950373058681857 0.000266686119469679 5.20599023249593e-12 5.52930585974342e-05 4.56738958283286e-05 XM_005223509.1 OARD1 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf130 (OARD1), transcript variant X2, mRNA. 0.0 2221 100.00 0.381277123372598 NM_145063.2 OARD1 Homo sapiens O-acyl-ADP-ribose deacylase 1 (OARD1), mRNA. 0.0 964 80.83 0.311221326720397 TCONS_00134177_2 sp|Q1LZ74|OARD1_BOVIN OARD1_BOVIN O-acetyl-ADP-ribose deacetylase 1; 1e-111 318 100.00 0.993421052631579 1 noncoding 0 0 1 0 0.0711140929583244 0.555651305006017 0.0124787991154583 0.801914478119773 TGCGGCCCCTGAAGACACACCCCTTGGGACTTAATGCGCAGGCGCCGCTCTACCCAACTTGCATTCGGCTGTCTCGTTACGCATGCCCGGGCGGCGGCGGCGGTCGGACTTCACCGCCGGAAGTTCAGCGGCCATCACCAAAGAGTGCAGGTTCGGCTAGCTAGCTAGAGGGGCTCGTTTCCGCCCGGCTCCCGGATGGTGGGCGGCCATCTTAGCTGAAGAAACACTTAAGTTCTGGAAATAGCGACCCAGTATCATGGCTGGCAGCCCTAATGAAGATTCAGAAGGAAGCCGAATTACTTACGTGAAAGGAGACCTATTTGCATGTCCCCAAACAGACTCTTTAGTGCATTGTATCAGTGAGGACTGTCGAATGGGCGCTGGGATAGCTGTCCTCTTCAAGAAGAAATTTGGAGGAGTGCAGGAACTGTTGAATCAACAGAAAAAGTCTGGAGAAGTGGCTGTTCTGAAGAGAGATGGGCGATATATATATTACCTGATTACAAAGAAAAGGGCTTCACACAAGCCAACTTATGAAAACTTACGGAAGAGTTTAGAGGCTATGAAGTCCCATTGTCTGAAGAATGGAGTCACCGACCTTTCCATGCCAAGGATCGGATGTGGTCTTGATCGTCTGCAATGGGAAAATGTATCCGCAATAATTGAGGAGGTCTTTGAGGCAACAGACATCAGAATTACTGTGTACACACTCTGAACAGAAGAGCATTTTGGATGTGTCTACCTTCTGCATCACCTGGGCCACAGGACTGAGCAAACTGACCTTAAAATGGTCAGAGGACCGTTTCTTGTGAAGTAGTCTGTGTTACAGGCCAGACCTGGGTTGCTGTATTCTCAGGATTGAATGGGACTCTGGAGGAGGGGTTTCTTGTTGCTAGGAATTTTTCTTTTTCAGGAAGGTAAGGGGAGGGACCAAATGTTGGGCCTAGGACCCATTTTGCTGGGGATGCCATGTGATTGGTTTGGGTTGCCACTAGGTGGCAGCATTGCTTTTCCCTGCTGTTTTAAGAGAAATTTCTGGAAGGATGACCGTTTTCAGTTAATTTTGCATCTTGTGTCATTTGTGCACTTACTTAGTATTATCCTTATGGCATCAAATTGATCCTAGGAGAGAATCATGGGTTTGGTTTTTGTTTAAATTACCAAAGTTTTATGTTTACAAGGAATTTGTGGTGACAAAAATGGAAAAATAAATATCTTTTTTTGAGCGGGGGTGGAGCTCCAGTGAGGTTCTTTGCACATGTCTGTGTTGTTCTGTGCTTGGCTAATGGAGGATTCACGTGTAACTTAATCTGAAAGAGGGCCCAGTAGGAAGAGTGGCAAGGTGAGAAGACATCAGAATGTGCAAGAACACTGGAAAGGCAGGCTTTTAGAATCTCCTTGTGCTGAACTCTTTCTCTCCTGTCCACCATATAGTTTCTGTGACTAAACCTGTCTGAATTCAGTCATAAAACAGAATAACATATGTGAAATACCTTGCAAAGTTCTTAGTGTGAACTAATGAATGACTCAATCTACAGTTATCAACAAAATCCATACACATCACTTTAAAATAAAGGTCCACTCCCTCTTAAACAGGAATTCTAATTTGGTAGGTAGAGGTGAGGGAGAATGGCCGGTTTTGTGTTTTTGAGCTCCAGAGGATTCTGATGTGTGTCCAGCTAGGATGGAAAAGAGAAAATTTGTTCCCTTCTAAGTTCAGAGCAGCACTATGTCCACTCTTGATTTCCATGGTGGAAGAATAAGGCTCATGGATTTTAGCCAGTGGTTCAGTATCAGGCTTCCCTGGTGGCTCAGAGGTTAAAGCGTCTGCCTGCAATGTGGGAGACCTGGGTTCGATCTCTGGGTCGGGAACATCCCTTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCTTGGACGGAGGAGCCTGGTGGGCTACAGTCCACGGGGTTGCAAAGAGTCGGACACGACTGAGTGACTTCACTTGCAGTATCAGAGGTGTGGGGAAACAAGGAGACTATTTCCACCCTCTGTTCTCTTACTGTGGTATTGAGATCAGACAGGCCTATTGATTTTCTTCATAGAATGAATTCTTGGTCTGTCAGAGGACTTGATGCTTTCCCAATTGTAAAAGAACCGGATTTTAGAAGGGGCTTGTTGAAACACCAGGAGAGCACTGGTTAAATGTAATCTTTGTACTTTAGACTTGTGTTGTTATTGCGTGGCAGCCTGATATGAGGCAGCAGTTTCAAAAAGTATTTGACTTCTTCTGTATCTCTGTGTAACAGATAAGTTCTCTATGTTGTTGGGGTAGGGGCAGTGCTGGGAGCAAGTTCACTGTCAAACTTTTAGACTAAGGTTTTTCTTGAAGCTTTGTTTCTGTCCACAGACACACAGTGAGGTTGAAAGGGAAGAAAATGTACAAAAAAGGAGAGTGGGGTGGTAAGAGGAAACTTAGAATTAAAGTATTTTGCTTAACTCTGCAAATAAATGTTATCACTGGGTCGAAACATTGGTTTTCTAGGATTAGGGTTAATTTGTTTCATGGAGTATGAGCCTCGTTCACATTTCTCTTAACAAAACCTAGTCTTGTGAAGGTCTGGCTGTAAGTGGAATTCCGCAGGGATGTGATAAAGTGCCCTGTCATTTGCAGATAGTCTTGGGGTCAGATTCCAATGACTTATCACACTTGAAGCCTGGGGAAAGGAGGTATGACCTGATAATCAGAATGGACACATTATTCCTGGAAACCTAGTTAGAGTTTGGCAAACACCCAGAAATTCACATGTGAAATTTTGCTTTTACATAGGACTCAGACAAGAAATGAGACTTCAGACACCATCCTGCCCTCGCCATCAAGTATGACGCACAGACTATCCCTACATTATGTGTATCCAAACATTTAAATCCTACTTCTCGCCCTTTCCTCTTTAATCAAGGAGCTAATTGCTTATGGATTGGCAATTGGGATGTTTATATTCCTTAGGAACAGGTTTCCTGTGCCTTTTGTTTCATCCTCTGCCATACTCCTTGTTTTCAGAGGAGAGAAAAGCCACTCATTTAGAAGTAATCTTGAGACAGTATTTTCTGAAGGTCAAGACAAATGTGTGAAGTCTGCATGGGAGTTGGTACATTCTGTGTAGCCCTGGCAAGTTCTGGTTTAAGCCTTTCTTCCACTTTATAAAACGTGGCTTGGTTCATAACCTGGGAC EMBV3_12471 AGCCGCTGATGCAGAAGCAGGTGGAAGAGATGCAGCTGAAATACTACAACTCCGATGTGC Gene GeneID:505916|SRM:XM_002694044:121_cdna Constitutive 1 NULL GeneID:505916 16 GENE SRM NULL spermidine synthase EMBV3_16234 GTGTCCTCTACATTGGACCCCTGCCTCTGATGATCCGTCTACGGCTGCCTCTTTACAAAA Gene GeneID:513681|LOC513681:XM_002693388:24_cdna Constitutive 0 NULL GeneID:513681 15 GENE LOC513681 NULL similar to olfactory receptor 554 EMBV3_13822 CTGAAGTTCAGCAATTCCTACAGTTTCACTTCAGTTTCTTTTTCTTCTGTACAATTCAAG Gene GeneID:519602|IFT81:NM_001081525:192_cdna Constitutive 0 NULL GeneID:519602 17 GENE IFT81 MGC152137 intraflagellar transport 81 homolog (Chlamydomonas) EMBV3_12427 TGCATTCCACAATTGGTCTAACTGCTGGGTCTGCAGAGCGCTCCCCTCTTCATCAGTGGA Gene BVV0101_048112 + 0 NULL GK000019.2:24731755-24739956 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218428 TCONS_00245188 TCONS_00087259 TCONS_00104274 TCONS_00222867 TCONS_00061482 TCONS_00165977 TCONS_00104280 TCONS_00040258 TCONS_00127738 TCONS_00004714 TCONS_00251792 TCONS_00246739 TCONS_00174808 TCONS_00167520 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00250681 TCONS_00125757 TCONS_00061491 TCONS_00030963 TCONS_00174805 TCONS_00060480 TCONS_00104276 TCONS_00023655 TCONS_00061483 TCONS_00171428 TCONS_00174806 TCONS_00188145 TCONS_00115209 TCONS_00232824 TCONS_00251680 TCONS_00175566 TCONS_00002600 TCONS_00031759 TCONS_00000529 TCONS_00198820 TCONS_00179681 TCONS_00103962 TCONS_00246740 TCONS_00220566 TCONS_00118459 TCONS_00061487 TCONS_00118040 TCONS_00060481 TCONS_00061484 TCONS_00210913 TCONS_00124997 TCONS_00009083 TCONS_00161488 TCONS_00166887 TCONS_00061481 TCONS_00252081 TCONS_00061490 TCONS_00061485 TCONS_00174809 TCONS_00140862 TCONS_00104277 TCONS_00091659 TCONS_00107436 TCONS_00198299 TCONS_00078426 TCONS_00004713 TCONS_00205125 TCONS_00061489 TCONS_00125692 TCONS_00061488 TCONS_00061486 TCONS_00250582 50 XLOC_131748 XLOC_150650 XLOC_052423 XLOC_062340 XLOC_136174 XLOC_036985 XLOC_100817 XLOC_024074 XLOC_077742 XLOC_001092 XLOC_154733 XLOC_151107 XLOC_104695 XLOC_102356 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_153624 XLOC_077299 XLOC_017212 XLOC_036749 XLOC_014322 XLOC_103815 XLOC_114188 XLOC_142307 XLOC_154621 XLOC_105347 XLOC_000643 XLOC_018004 XLOC_000141 XLOC_120473 XLOC_109453 XLOC_062257 XLOC_133883 XLOC_072622 XLOC_072206 XLOC_129423 XLOC_076540 XLOC_004639 XLOC_098377 XLOC_101723 XLOC_155022 XLOC_085291 XLOC_056432 XLOC_063346 XLOC_119956 XLOC_047314 XLOC_124587 XLOC_077234 XLOC_153525 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_13302 TCTTTCCAAGCCCTGGCAGAGGGCAAAGCCTATATTACAAAAGAGGACATGAAGCAGGCC Gene GeneID:505122|SPTA1:XM_002685932:80_cdna Constitutive 0 NULL GeneID:505122 3 GENE SPTA1 NULL spectrin, alpha, erythrocytic 1 (elliptocytosis 2) EMBV3_02163 TCTGCCTGTCATCCAAACTCTTGGTGGGCATCGCTGGGTCCACCCTCGTGTCCAAATTTT Gene GeneID:507138|ISG12(A):NM_001038050:187_cdna Constitutive 1 NULL GeneID:507138 21 GENE ISG12(A) MGC133942 putative ISG12(a) protein EMBV3_38459 TGTGTGAGTGAAACAACTTTATAGGGCTGGTGAGCTGGTAAACATTGGCCTGTCCGCAGG Gene BVV0102_118906 + 0 NULL GK000013.2:81325597-81567714 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08700 CCAAAGTGTGTGCATTCCTACCAACAGCATATGAGGGTTCCAGTTCCTCCCCATTCTTGC Gene BVT0102_166602 + 1 EMBV3_11985 GK000006.2:99518775-99526728 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205956 TCONS_00203930 TCONS_00203932 TCONS_00205953 TCONS_00205954 TCONS_00203931 TCONS_00205955 2 XLOC_124792 XLOC_124305 Coding TCONS_00203931 XLOC_124305 Coding Coding THAP9 6:99498239-99524188 j TSS152660 7913 1 TCONS_00203931_3 799 0.403639580437255 5 0.695236627100354 0.000629702763673437 0.00114064658485418 0.000553899097745634 0.000573895386772935 0.000833002271035048 0.000275321311711445 0.000522218177084709 0.000477724024276073 0.00114361023907666 0.000162499729053305 3.28347437933314e-06 2.62141626608972e-05 9.49628535298325e-05 0.000260936941247815 8.18980263828123e-05 0.000126175927868466 1.9170729589693e-177 9.58657910654439e-05 0.00111070506243803 0.000633938545772669 0.000277943040370487 4.38489102050214e-52 3.08524944576251e-05 5.37761628249831e-05 0.00047323011194016 0.00108253343924346 0.00058832686362895 1.66301255506204e-05 1.13373517252022e-05 2.81182322990359e-182 NM_001244183.1 THAP9 Bos taurus THAP domain containing 9 (THAP9), mRNA. 0.0 3011 100.00 0.210792366991027 NM_024672.4 THAP9 Homo sapiens THAP domain containing 9 (THAP9), mRNA. 0.0 2228 80.05 0.312650069505876 TCONS_00203931_3 sp|Q9H5L6|THAP9_HUMAN THAP9_HUMAN THAP domain-containing protein 9; 0.0 930 81.98 0.692115143929912 1 coding 1 1 1 1 0.0724440576808387 0.619490348817666 -0.00563343423735781 0.914588112472796 AATAAAGGTAGTAGCTGCGGAGTCAGCGGGCGGAGCTAACTTGACCGCGACTCATGCTGTCGCGGGAACACCGGAGGTGGAGCCCCACGTAGCAAGAAGATGACCCGAAGTTGCTCGGCAGTGGGCTGCAGCACACGAGACACCGTGCTGAGCCGGGAGCGCGGCCTCTCTTTCCACCAATTTCCAACTGATACTATACAGCGCTCAAAATGGATCAGGGCTGTTAATCGTATGGACCCCAGAAGCAAAAAGATTTGGATCCCAGGACCAGGTGCTATGCTATGTTCCAAACATTTTCAAGAAAGTGACTTTGAGTCATATGGCATAAGAAGAAAGCTGAAAAAAGGAGCTGTGCCTTCTGTTTCTCTGTACAAGGTTCTCCAAGGTGTACACCTTAAAGGTAAAGCAAGACAGAAAATCCTCAAACAGCCACTTCCTGATAATTCTCAAGAGGTTGCTACTGAAGACCATAACTACAGTTTAAAGAGACCTCTGACAATAGGAGCAGAGAAGCTAGCTGAGGTGCAGCAGATGCTGCAAGTGTCCAAAAAAAGACTTGCTTCTGCAAAAAACTACAGGATGATCAAGAAGAGAAAGGGCTTACGACTAATTGATGCGCTTATAGAAGAGAAGCTACTTACAGAGGAAACAGAATGTCTGCTACGAGCACAATTTTCTGATTTTAAGTGGGAGTTGTATAACTGGAGAGAAACAGCTGAGTACTCGGCAGAAATGAAGCAGTTTGCGTGTACACTCTACTTGTGCAGTAGCAAAGTCTACGATTATGTAAGAAAGATTCTTAAGCTGCCTCATTCTTCCATCCTCAGAACGGCCTCTGGATATTTGCAAGCTCAGCTGCTTCGTCTGACAATTGGCAGACTAAGTGACATAGGGATCACAGTGCTGGCTGTCACATCTGATGCCTCAGCTCACAGTGTTCAGATGGCAAAGGCCCTGGGGATACATCTTGACGGAGACAACACGAAGTGTACATTTCAACATCCTTCATCTTCCAGCCAACAGATTGCCTACTTCTTTGATTCTTGCCACTTGCTTAAATTAATAAGAAATGCATTTCAGAATTTCCAAAGCATTCAGTTTATCAACGGCACAGCTCATTGGCAGCACCTCGTGGAGTTAGCAGCACTAGAGGAACAGGAATTATCACATATGGAGAGAATCCCAAGAAAACTTGCAAATCTGAAGAACCACATACTGAAAACGAATTGTGCCGCCCAAGTCTTCAGTGAGAGCGTGGTCAGGGCGTTAGAATGTTTGCTATCGTTAGGCCTGCCTTCTTTTCAGAACTGTGTTGGTACCATCCACTTCTTACGCTTAATTAACAATCTGTTTGACATTTTTAATAGTAGGAACTTTTATGGAAAGGGATTTAAAGGACCTCTATTACCTGAAACTTTTAATAAAATCAACCATGTGTTAACTGAAGCCAAGACTATTTTTGTTACATTATCTGACACTAGCAATAATCAAATCCTTAAAGGTAAGCGAAAACTGGGATTCCTGGGATTTTTGCTTAATGCTGAGAGCTTAAAATGGCTCTACCAAAATTATGTTTTCCCCAAAGTCATGCCTTTCCCCTATCTCCTGATGTACAAATTCAGTCAGGATCATCTGGAATTATTTCTAAAGATGCTCAGACAGGTATCAGTAACCACTTCTAACCCTACCTGCGTGGCATTCCAGAAAGCTTACCATAATTTGGAGACCAGACACAGATTACAAGATGAGGTCTTTCTAAGTGAAGTAAGCAGCCTTGACATTTCAATTGCTCGAAGGACAGACCTGGCCCTTGGGACAGTTCAGCGTGAGTATGGTGTCAGCGTTATAGAGAGTCTTTTTTACAAAGAGGATATTTGCCCAGACTGGTCTGACTGTTTGCTGAGCGAGGCCTTACTAGACCTGTCAGTTCGTAGGCGAAATCTCACCTCTTGCGCTGGTTATATTGCCAATAAGTTATCAGCTCTTTTAACATGCGAGGACTGCCTCAGTGCGCTGTATGCATCGGATCTCAAAGCCTCTAAAATTGGATCCCTGTTATGTGTTAAAAAGGAGAATGGTGTGCATTTCCCTTCTGAAAGTTTGTGCCGAGTCATAAATACTTGTGAGCGAGTTGTGAGAACCCATTCAAAACCAACAGTTCATGAACCACTGCTTCCCAAACAGAGGGAATATTACCTTCAACAGAAAATATTATATGAGCTTTCTGGGCATATTTATCTTTTTGTAGAGTTAGATGAGCATCTCTTTGATGGAGAAGTATATGCCATCAATCACTTTGTAAAGTTACTGAAGAATATCATAATCTGTTTCTTAAAGATCAGAGCTAAAGATGTAACTCAGTACTCCTTAAAACACCACTCAGAAAGAATTGAGTTGAAAACTTTGTCAAGCAAACACTGGTCATCTTCACAGAATTACAGATGTTCGAGTTTTGCCAATACCAATAAATTCAGGCATTTGCTAAGGAACAATAGATAGACATTCAAATGAAGGACCTAAAATATATTAACATTTTTATTAAAAATAATTGGTCAACATTTATTTTAAAATTCAGCTGACAATATTTTACAAATTCTGCACAGTGGACAAGTTTGTGTCTGTGTCTTAGGAATTTCTGTTATGCACGTTATCAAATCTGCATGGAATTTGGTAGGGCTTGCAAGCATTTCAGAGTTACCTAAAACGTAAAAAGCGAGAAGTCAGTAAGAACACTAGCCAACAGGTGCTGTGTTTGAATTTACGACTATCCAACTGAGTAATTCAACTGGACATACTTTAAAAACAAGTGAGAATGGCAGAAACAAGCACAATATTGTAACACAATTATCCTCCAATAAAAGTTTTAAAAAGAATAATGACAAAGGAGTCACTAAAACATTGACTCCTTTTATAAAGACTACATTCCCAGAAAGAGATTTGGTCTACAACTCTTAAGAATAACACTTGAAAAAAAAAAGAAGACTGTTAACAGAATACCTATCAAACTGTGAATATAGTTTACTTACACATGAAAATTAGGCCAAGTTAAATACCAAACACTACAAAAATCCTTTTGCTGGGGTACCTTTAAATAGAAATAATTAAACTCTATTAGGCAGAAGGTAAACAAACACATGAGCCCTGAAACGGACGATTCCTTGTGCTACAGCCAAGCTCGGAAATGTTGTCTGGGGAGTATGCAGGTGACGCAGTTTTCACAGCCCATTTGTCTGGACTTCATACTACTATGAATAATAGAGTGGGTACTTGACTCCTATTGGAGGAGCACAGTGCTCACCAGAGAACGCAAAGAAGCCTTTTCTCAACTTCTTCTGAAGAGGATAATGATGAAACATTTTCAGTTTGCAATAAGGTTGTTTCATATCATGTGATAAATCAGTTGGGGAAAAAATGGTCAGTTGGGAGAGTATGAAAAAGTTTGTCTTAATCACATAATGAGATTTTTCAGAAATTTGGGAGAAGCTTAAATAATCTGAAGATGGAAACATACTAAGAACAATTTTCTCTCTCGTATCCAGATCTGAAAAGACAAAATAGGATAACATATAGTTATATGTACTTCCAGAAATGGGGGTATTTTAATGGGGAAAAAAAAAAATGAACACAGACATTATTCACCTATGTAAAGTATCTCTTATTGTCATTAATATTCATAGACTACAGTTAATATGAAGACAAAGTTGTAAAAGATTAAGGACAGATAAAACTTGTTTTATTCATCGAAGTTCCCCATAAATAGTATATTTTGATATATTTCTGGTGGGTCTACCTCAAAGGCTTCAGTTTTGAACTGTAACCAGAACTGTCCTGTACTGCATTTTATAAGGAGATATTACTAAGGAGTCTGAATACTGTGGGTTTTGTTTTGTTTGCACTAGAATGAGTTTAGATGCACCAGGATAAATCTTATTTAAAGGAAGCCTGTTTATGTCACCACCTTTAACTTATTGCTTATATAAAGTCAAGTTTTGTACTTATTTTAACTTAAAGCTAGGTTCATATCTGTAGTGTCTTATGTTCTCTGCTGTTACATCTGACCCATGTCTTGTGTAATTTATTAAAATAGTGCTTTGCATTTATTTAAGTGCTGGGTATAAACTGGACAAACGCTGAAGACAAGAATTTTTCCATCACTGCCATTAGCTCAGTTAGTTGTTCTTGCCTTAGTGCAGTGATCCAAGTCTGATGTCAGATTTACGTGATATGATATGCTTCACAGTGAACTTGCTGTCCATACTTGATTAGGGTAATTGATAGTTTACAGTTTCTACTCAGCACCCTTGTTCTTTCTCTTCAGAGAAAACAAATGTTCAGAAATGTATCCTTCCTACTTTCAACAAATAGTGCTGGAATAACTGGATATACACATGCAACATGTTAACTCTAAATGGAGCAAAGATACAAATGGAAGAGGTAAAACAACTCTTAGAATAAAATAGTGGAGACTCGGATTCGGCAATAGCTTCTTAGGACACCAAAAGTACAAGCAAAAACTTCATCAAAACTGAAAACTTTGTGCTTTAAAGGACACCCGTCAAGAAAGTAAAGGACAAGCTATAGAAACATTTTCCAAATCATGTGTCTGGTAAAGCACTTGTATCTGAGTATACAAAGAACTCAATAATAAAGGATAAAACAACACAATTTTTTAAATGGGTAAAGAATACGAAGTTATTCTTCAAAGGAGATATACATGAATATGTGCTCAACATCATTAGCCTTTTGGGAAATGCAAATCAAAACCACAACGAGATATCACTTCACACTCACTAGGATGGCTGTAATAAAATAGACAAGATAACAGGCGTTGGCAAGAATGGGGAGGAACTGGAACCCTCATATGCTGTTGGTAGGAATGCACACACTTTGGAAAACAGCCTAGCAGTTCTTTGCCAAATGACCCAGCAATTCTACCAATGGGCATATACCCAAGAGAAATGTACAAATTTCATAGCAGCATTAAAATAGCTAAAAAGTGACAAAGTCCAAATGTCCAACTCATGAATGGATATTTTACATTGTAACAAACTATCTTTTGCTGTGATGTACCATGCAGTACATTAACCAGAAATACATGAAAAGTTCTAGTTCCTCTACTTTCTCCCCAACACTTGGTATTGTCAGGGTTCTGTTTTGAATCAGCTGTTCTAATGGGTGTGCCGTATTTCATTGTGGCTTTCATTTCTTTTTCTAATGACTAATGATGCTGAACATCTTTTCATAGGTTTATCTGCCAGTCACTGTCGTCTTAGGTGAAATGTCTGTTCAAGTCTTTTGCCTCTATTTTAAGGAAGGTTGATTGTTCTCTTACTGAAAACAGTTAAATAAAAACAGTAAGTTAGTTAAGTATTCTGGATAAAAGTACATTATTAGATGTATCTTGCAAATACCTTCTCCCAGTTTATGGCTTTTAAAATTTGAGGTAAAGTTGTACAGTGTAAGTTGCAAGTGTATAACATAATGAGTGGTTCACAATTTTTAAAGGTTACGATGTGGCTTTTACTTTTTTAGTATGTTTTGAAGAACAGACATTAATTTTATAAGTCTAATTTATTGATTTTTCTAGGGATCACACTTCTTAGTTTCTTATCTAAGAAATTTGTCTAAACCAGTCACAGATTTTTCTTCCTATGTTTTCTTGTAGATATTTTCCAGTTTTAGGTTTTGCATTTAGGTTATGATCCGTTTTCGTTGTCTTTCGTGTGTGGTAGTTCGTATTTTTACATACTGATGGTATCCCAGCACCATTTGTTAAAAGGACTGTTCTTTTCCAGTAAATTACCTTTGATCCCTTGTCAAAAATTGACCACATAAATATTAATCTATTTCTGGGCTCTGTATTCTGTTGCCTTGATCCATGGGTCTTTCATCAATACCACATTACCTTGATTAGCCTTATATAATTCTTGAAGTCAGGTAGGAGTCTTCCAACTTCGTTCTTTCATAAAAAATGTTTGGCTATTCCAGTTGTACCTTCCCATGTAAATTTTATAATCAGCTTGTTTTTACAAAAACTCCTTATGGGATTCTGACTGGAGTTATGTTGAATCTATAGGCTGAGGAGAAATGATATCTTAATATTGACTTCCAAACCATGAAAATTATATATATATAGAAGATCTTCAATTTTTTAATCAATGTTTTTGTTTCACATACAGATCTTGTACATATTTTTGTTACGTTTCATGTTTTGTGGTGCTGCTATAAATGGTAATTTTAGAATTTCAGTTTCTAAATGTTCATTGCTACTATGTAGAAATATACTTTTTTGCAAACTAATATTGCTAAATGCACTTGTTAATCCTAGTACCTTTTTATTAAGACCCTTTGACTTTTCTTATATAGGCAATCACATCACACCATCCACAAATAGACACTGGCATATTTATTCATTCCCAATCTATGGCCGTTTTGTAAAAAAAAGAAAATCTTATTGTACAGTGACCCAAACACAACACTGAACAGGAGTGTTTTGTTCCCAATCTTAGGGGGAAACACAGTCTTCACCATTCATGTGATGTTAGTTGTAGGCTTTTTGGTTGAGGATCTTTTCTATTCCTAAATTGCGGAAGAATTTTTTTAAACCATAAATGGGTGTTGGAACTTTCTCAGATGATTTTTCTGCTGGTTTCAGGGGGAACATTTTTGAGCTCTAATTTACATACCATAGTATTCACCCTTTTAAAGCATGTAATCTAGTAGTAGTTGGTATAGTCAAAAGGTGGTTTTCCGCAGTTTTTGAGATGATTGTTTTTCTTTTGTATGCTGATACACTGAACTACACTGATTTCTTTGAATGTTGGGTCAACCTTTTATTTCTGGGGTAAACCCAACCTGTTCACAATGTATTCTTTTTATTTACTGTCAGATTTTTCTGTTGTTCAGTCGCTAAGTCGTGTCCAACCCATGGACTGCAGCACGCCAGGCTTTCCTGTCTTTCACCATCTCCCGGAGCTTGTTCAGACTCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTGTCATCCCCTCTCCTGCCTTTGATCTTTCCCAGCAACAAGGTCTTTCCTAAGTTGACTCTTTGCACCAGGAGGCCAAAGTACTGTAGCTTCAACTTCAGTCCTTCCAATGAATATTCAGGGTTGACTTCCTTTGGGATTGACTGGTTTGATCTCCTTGCTGTCCAAAGGATTCTCAAGAGTTTTCTCTGGCACCACAGTTTGAAAGTATCAATTTTTCGGCACTCAGCCTTCTTTATGGTCCAACTCTCACATCTGTACATGACTACTGGAAAAACCATAGCTTTGACTATACAGACCTTTGTCGGCAAAGTGATGTCTCTGCTTTCGAATGCGCTGTCTAGGTTTGTCATAGCTTTTCTTCCAAGGAGCAAGCATCTTTTAAATTCATGGCTGCAGTCACCATCCGCAATGATTTTGAAGCCCAAGAAAATAAAATGTCACTGTTTCACTAAATTATAGTTACATTGAAGTCTGTGGCCTTATAATAAACATTACTCTGAATATACTTTTTGAAACTAAAAATGCCTTAAATGCAAAATAAAGTTTTAATTAAAGCCTTTAAAACTTAGTATTTTATAAAATTACTTGGATTAAAAAAGTTCACATTTGGTCTATAGGTAAGGGGGAAAATGTGCATTAAAGAAGCCCTAACAAGAAAAAAAAAATCCTAAGTATTAACATAATGAAAAGTAACTATAGTAATAAAGGCTTCTTAGCTGATTGACTTCCCTCTCCTTTAAGCTGCTGCTCCAGAATTCCTATATAAAATATTAATACTTAAGGATTAATACTTAAGGATGCAGTACGATCACAGGGCTGGAGGTCCTGGTTTGAAGCTGTATTTACATAACAAGTATTCATCATCTTAGTTATTTGTGTTATA EMBV3_18208 GAAGTTGCTAGCAGAGCCTCAGGAACTGCGGCTGCTACGGGCGCCCGGCCGAGGATGGGA Variant GeneID:509263|LOC509263:NM_001031755:85_cdna 188^397 3 EMBV3_01203 GeneID:509263 16 GENE LOC509263 FLJ20584 hypothetical protein LOC509263 EMBV3_36244 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00887 ACATGGACCCAAATGTGTGACATAAGAGATTTTGGAAAACATTTATAAAGAGCTGTCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14623 TTCCACTCACCTGTGAGGTAGCATGGGCTTTTTCACAGCAGATTCACTTCCTTCTCTGCC Gene BVT0101_076972 + 0 NULL GK000023.2:5175680-5381559 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40073 AATCTGCTTGGTTTCTACGTTCCAAACAGCAAGTGACCAGGAGTTCTGTAGAGGAAGGAG Gene BVV0102_263049 + 0 NULL GK000002.2:43643563-43649133 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18903 ACTCCTGTCCCCTGGTGATTTGGGGAGAGCCCAGAACAAGCTCAATTTCTACTTCCTTCT Gene BVT0101_027451 + 0 NULL GK000006.2:72891471-73021621 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31873 TGGACTTTTACATCCATGAATCACTTCAACGCCATGGCCACGGACGAGAACTCTTCCAGC Gene GeneID:786491|MGC165685:NM_001099198:225_cdna Constitutive 0 NULL GeneID:786491 23 GENE MGC165685 NULL hypothetical protein LOC786491 EMBV3_27852 TGGCCAGCCATCTTCATGCGTGTCTCTGTGTTTGTGGACTGGATTCACAAGGTCATGAGG Gene GeneID:514667|MST1:NM_001075677:169_cdna Constitutive 0 NULL GeneID:514667 22 GENE MST1 MGC137619 macrophage stimulating 1 (hepatocyte growth factor-like) EMBV3_04019 GCCAGGATGATCTCGGAGGCTATCAAGACAAATGCTCCCTCGTGCACTGTGGAAATGTGA Gene GeneID:507786|NLRC3:XM_002697946:634_cdna Constitutive 0 NULL GeneID:507786 25 GENE NLRC3 NULL NLR family, CARD domain containing 3 EMBV3_02015 ACATCCAGCTGAAGGACCTGGAGGCGGTGCTGTCTGTCGGAGTCTTCAATAACAAACACA Gene GeneID:533928|TOR1B:XM_002691675:447_cdna Constitutive 0 NULL GeneID:533928 11 GENE TOR1B NULL torsin family 1, member B (torsin B) EMBV3_30075 CGGTGACCCCGGTCTCTAGTAGGTTGTGACACTTGTTTATCCCAGGGCAGATGAGATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21945 TCAAGGTCAAGCACCTAAGGCATTTCCCATCTTACTAGCGTTTCTTGTCCTAAGTCCAGC Gene BVV0102_131928 + 0 NULL GK000018.2:63589348-63602705 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087619 TCONS_00087617 TCONS_00087615 TCONS_00087618 TCONS_00087616 1 XLOC_052549 Coding TCONS_00087619 XLOC_052549 Coding Coding NLRP13 18:63599498-63642109 j TSS65043 7043 1 TCONS_00087619_8 1174 0.194235411046429 18 0.835132597981694 0.000564379093413557 0.000824817369043994 0.000593983795627977 0.000374853781144045 0.000143580609019243 0.000235025593790803 0.000406672184287845 0.000308717896485569 0.000252579111705135 3.3665130692819e-06 3.70834842822732e-07 4.59728351388564e-10 1.20340016541827e-05 6.34667423927233e-244 1.36506992721201e-05 3.61269100125151e-05 4.51299782320337e-07 0 0.000463540766186769 0.000304864532004212 9.03358048998715e-05 4.6953577824235e-43 3.97142773372326e-139 4.11323751651935e-58 0.000253266464768554 0.000684421711516582 0.000352759425378006 0 1.90421788067067e-73 3.18387225173529e-05 XM_002695466.2 NLRP13 PREDICTED: Bos taurus NLR family, pyrin domain containing 13 (NLRP13), mRNA. 0.0 4518 99.96 0.355956268635525 NM_176810.2 NLRP13 Homo sapiens NLR family, pyrin domain containing 13 (NLRP13), mRNA. 1e-54 221 73.83 0.0511145818543234 TCONS_00087619_8 sp|Q86W25|NAL13_HUMAN NAL13_HUMAN NACHT, LRR and PYD domains-containing protein 13; 0.0 727 46.23 0.752129471890971 3 coding 0 0 0 0 0.137151548933702 0.481053888759753 -0.0230850378129895 0.79399876760947 GGGGTGCCATTGCCTTCTCCTAGTCTGTTTCTCAAGTCTACTGTAAATGTGCTATCCTACTTGCATACTTTAAAAGATTTTTTTAAAAAGTGGGGGAAAGGTGGATGGTGGGGCAGACCAAGTGCATTTTCCTTCTGCTTTGGGAGATGTTTATGACAGGAAGGAGTCAAGAAGCCTACTTCCCTCCAGGGGTGAGTTAAATGAGTTATAATTGTTCATTAAAATCACTAATTTAATTGGTAATACAATAGTAAATAGTGGTGGTATAAAGACTAAGCTGCCTTGATCCTGACTTCAGTGGAAAAGCCTCTGTGTATCTGATGGAATGGGTCCACGGGTGGTTTTCCTTGCATTGGGAGAAGAAATGGTTCCAGATGTGGTTGTGATTTTCAGACCTCATGGACTCTTTTTTTTTTTTTTTTATTGAAGCATAGTTGATATACAATGCTGAGTTCATTTCTCTTGTACAGCAAAGTGATTCAGTTACACGCAGACACATACATCCTTTTAAATAGTCTTTTCCATGATGGGTTATCCTGGGAAGTTGAATACAGTCCCCTGAGCTCTGCAGTACGACCTTATCCCTCTATAATCTTTCGCCTCTGCTAATCCAAAGCCCCAGTCCTCCCCAGCCTCTCCCTTGGCAACCACCAGTCTGTTCCCTATGTCGGAGTCTCACAGACTCTTCATTCGTCTCCTCTTTCATCATCCTATTAAGATCTCTGCACACCCCACCCTGCCCTGAAGATGGTTGTTGTTGTTTTTCAGCTGCTAAGTTGTGTCCGACTTTGCGACCCCATGGACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTTACTCAAACTCATGTCCATCCAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAGTCTTTCCCAGCATCAGGCTCTTTTCCAATGAGTCAGTTCTTCTCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGAGTGATTTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGCTCAAAAGCATCAATTCTTCGGCGCTCAGCCTTCTTTATGGCCCCACTCTAGGACAGGTATTCACACCACTGGCCTCCTGCTGATGTGGGAGATTTCATTTACATCAGCTGGGTTTTAATTAGAACCTCCAACTCTGCATCCCTCTCTTAGCCGGGACAACTTACACCTGGAAGAAAAGGACTCCAGGATCACCTATGGCAGGTGGCTTCTCCACCCTCCGGAGACGCGGCTGCGACGGAGGGGGCGGGACACCCGTAGACAGACCTGATAGGAGCTGGAGGGGCCCCGGGGCCAATCACAGGCTGGGGAGGGGTGGGGCAGACTGCTTCGGGTCCGGAGTCTGCGTTCTAGAAACTCGCAAGAGCTGAGAAGACAGCTTGGAGCTGTTCCTATTGCGGCTGGAGACCTCGCTCCCGGGCCGATGGCTTCCCCTGCCGGCATTTCTTGGCATGATGGTGCCCGTGACCAGCTGCTGTCCCACCTGAGGGGCTTGGATCCCTGGCAGCTGGAGGACTTCAAACTAGCCCTGCAGTGCCCGGAGCTGCTGCCGGAGGGCGCCCGCAGGATCCCCTGGGCAGACCTGAGAGCCGCGGGCCCCGCCGACCTGCTCTGCCTGCTGGAGGAGCGCTTCCCCGGGAGGCGGACGTGGGAGGCGGCCCTCCGCGTCTTTGAGGACCTGCGGCTGAGCTCGCTGTGCGAGCGGATGCGAGCAGAGCTAAAAAAAAATCTTGGAAGCCAAAATACACAGGACACTTATTTGACAGAAATAGTGGATGCAATGATTTCCATTCCCACGCACGGTGAAGGAGGGTGCCCTTCTTTCCACACCCTCTCCAGCACTTATGGCTGTCGAATATTTGAGATGTCCATTCGGTCCAGTGGAATGGCCACAAGGCGGCAGCATTTCTTCCTGCCCAACTCCGGTTACCTGGGCAACCAGAGCCTCAGGGCGAGTCCTGTTCCTGGAGGTTGCTTCTGCATCTTGGCTGTTGGACCTGGTGCCGCCGTGATCGTTGTGCTTAGGGAGCTGGTGATGGACGTGCTGAATCAGTACATTGTAGAACCCGGTAGACGGCCCACCCAGGTCACCAGGCGCCAAGATGTGAGCGGAGACTCCGAGGGGATGGAGAGAGCCAAGCGGAAATGGGAAATGTCACAGGTGTGCAGACTCCAAGATCCAAACCAGGAAGAACCAGAGACGCTGGAAGAGACAGCCCACAGAAGAAGATACAGGGAGAGGCTGAGGACCCGGATCCTGGCCCTGTGGGACCGCACGCCCTGGCCCGAGGACCACATCTACCTGCGGCACGTGACGCAGCGGGAGCACGCGGAGCTGCGGGGCCTCCTGCGCCCGCGGGGGGCCGGGGCGCCGCCCCTCACCATGCTGCTGGAGGGCGCGGCCGGCGTGGGCAAGACCACCCTGGCCACCAAGCTGGTGCTGCACTGGGCGGAGGGCGTCCTCTTCCGGGGCCGCTTCTCCTACGTTTTCTACATCAGTGGCCACTGGCTGGCCAAGCTCGGTGACATCAGCTTCGCTGGTCTGCTGGCCCTGGACTGGCCGGACTCGCAGGTCCCCGTGGAAGAGTTCAGGGCGCACCCCGAGCGGCTGCTGTTCGTCATCGACGGCGCGGAAGAGGTGACCCTGGGCTCCAAGGGCTCGGCCAGCCGGCCCGGCGCCGACTGGTACCAGGAGCTCCCGGCGGCCAGCATCCTAGTCCGCCTGCTGAAGAAGGAGCTGGTCCCCGAGGCGACCTTGCTTGTCACCGCTGGGCCCCCCGGAGGCCACGCCCTCCGCGGGCTGCTGCTCAGGCCGTGCCGCGTGGGCATCCCGGGCTTCACCGAAGGGGACCGCCGGGAGTATCTCAGGAGGTTCCTGGGGGACCCGGACGTGGCCGAGGAGGCCTGGCGCCGGATGCAGGGGTCAGAGACCCTGGTCCGCTTGTGCGCCGCGCCGCTGGCGTGTTGGGCCGTGTGCGCCGGCCTCAAGCGGCAGCTGGCCGGCAGCCCGGCACCGGCGCCGGGCGCGCCCACCCCCACCGGCCTCTACGCCCAACTCTTCTGCAGCCTCCTCGCGGGGGCGGAGCCGGGTCTGCGGACCGGCAGCTCGGCCGGACAGTGGAGGGCCTTCTGCTCGCTGGCCGCCGAGGGGCTGTGGCTGGCCGCCTTCACCTTTGCAGGAGACGCCCTGGAGCGCTGGCGCCTGGAAGCCCCTTTCATCGACGGTCTGCTGAGGCTGCAGATTCTTCGAAGGGTCAGCGACTGTGAGCACTGCGTGACGTTTGCTCACCGGAGCTTCCAGGAGTTCTTCGGGGCCTTGTTCTACGTGCTCTGGGGGGCCCAAGGCTCGCTGGGCGGGGTCCCCCGGCATCAGGAGATGAGGCGGTGGCTGAACCACGCCTTTGCCGACGCCAACCCCTACTGGCGTCAGATGGTGCGCTTTTTCTTCGGTCTCTTAGGAACAGACCTGGCCAGGCAACTGGAAGAGGCCGTGGGTTGCCGGATGTCCCCCGGGGTGGCCGACGAGGTGTTGGACTGGGCGGAGGAGCTGGAGAGGTGCGGCGCCGTCTCGGGGCGCTTTGACTTCCTGTGGCTCTTCCAGTGCCTGCACGAGACCCAGGACGAAAACTTGGCCCGGCGGGTTTTGAATCGCCTCCCAGTGGCCGATCTGGACATTCAGGGCTGCGAACACCTCCGGGTCTCTTCCTTTTGCCTCAAGCACTGTCAGAAGTTACGAAAGCTGAGGCTCTCTGTCAGCCACCGTGTCCTGGAAAAGAAACGGACTTCCGGCCTGGGAACTCCGGAGATGAGGGTTGCCGATTTCCGGATGCATCAGTGGGAGGATATTTGCTCGGTGTTTTGCAGCGGGAACCTGAGCCAGCTGGACCTGAGTAACAGCAAACTTAGCACTGCCTCCATGATGAGACTCTGTCTCAAGCTGGGAAACCCACAGTGCAGACTTCAGAAACTGGCCTGGAAGTCCATGGCCCCTGTGGAGGGTCTGAGGAAGCTTGGTCTTCTGCTTCGTGGTGACCGGCACCTGACCCACCTGGACCTGAGCTCCAACAGCCTGGATGCCGCTGTGTCCAGGGGCGTGTTCAGAATGCTGGGGCACTCAGCCTGTGGCCTCAAGTATCTGTGGTTGGAGTCCTGTGGCCTGAGCACTGAGGTTTGCCATCAGCTCTTCACCGAACTCGGCAGGAACTCGAGTCTGAGCTTCCTCAGCCTGGCGGACAACGACCTCTCCCACGTTGAGCTGGAGAGACTGCGGGAGACCCCGGGGACGGCCACCTGTGCCCTGAAGGAGCTGTCGCTGGAGAAGGGGAACCTGTCAGCGGCCGCCTGTGAGGACTTGGCCTCACTTCTCACCAGCACCCCCCGCCTGACTCGACTGTGCCTGGGACTGAACCCGCTCGGAGATGAGGGCGTGCAGCTGCTGTGTGGCTCCCTGACTCGGCCTGAGTGTGTCCTGCAGAGACTGGAGCTCTGGTGCTGCCGGCTCAGCACGCCCAGCTGCAGGCACCTGTCGGACGCCCTCCTCCGGAGCCGGAGCCTGACGCATCTGAACCTGAGGAGGAACAGCCTAGGAGACGGGGGAGTGAAGCTTCTGAGCTCAGCCCTGGGCCGTGCGGACTGCGCCCTGCAGAGCCTGAAGTTGGAGAAATGCAGTTTGACGGCCGCTTGCTGCCGGCCGCTGTCCTCTGTTCTCGGAAGCAGTAAAAGCCTGGAGAACCTGAACCTTTTAGGAAACAACCTGGGGCCAGACGGAGTCAGCAGGCTGTGGATGCCCTTGAGAAAGCTGACGTGCAAGCTGCGGAAACTCGGGCTCGAAAAAGACCTGTGCTCTGTAGTGAGTGCCGAGTTGGAGAAACTACATGAGAAGGGGTGCTTTTTGAGAGTCAAGTCTCAGTGGGACTTTAATGACCCTGAAGAGAGATGGTGGTGGTGACCCATGGAGGCGACACCACAGGTTTACCACGGCCCGTCCTGGGAGAAAAGCCTCCCTGACGCACCGTGTGTTGCTCAGGAATTTCCGTTCATGGGGACGAATGAGCCGTCGCCTCCAGGATGCCCCTTCAGTCTGTGACAGGCAGCACGTTAAATGCCCAGTCTGCAGAATACTAACCCAAGTCTCTATTTGGCCCAAGATCCTACATGGGCTCACCTGTATGTGGGATGCCTTAGCTCCAGGACCAGGGATGGATCCCGTACCCCCTGCATTGGAAGGCGAAGTCTTAACCACTGGACTGCCAGGCAAATCCCAAAAGAAAGATTTTAAGGAACAATCTAACAATCCAGGAACTAAAAGAAAAAAATACTAAGCCCAATGCTCACCAGAAGGAAAGAATTAACAGAAATCAGAGCAGAAGTAAATGAAATACAGACCAGACAAATAAAAGATCAGCAAAGACGAGAGTTGGTTTTTTGAGAAGATAAACTCTCCGCCCGGTAGGAATGTGAGGGATGGTTATAACATTCAAGGTCAGGCACCTAAGGCATTTCCCATCTTACTAGCGTTTCTTGTCCTAAGTCCAGCTGAATTTACTTCCCTTAAAAAAAAAAAAAAAAAGAAACACATTTTCCTTTTATCACAACAATTCACATCCTTCCTTTTTCCTGGAATTCCCTTCTTCCCACTCCTTCAACTGTCTTGCTCCTTCAGACTCCAGCCCACTTGATTTGACTTGCTCACAGTTGCCTGATGATAATCCTCAGTGACCATTTCTGATTCTCTATCTCAGTCTCAAGATGGGATGGGGAGGGAGGTGGGACAGGGGCTCAGGATGGGGGACGCATGTACACCCATGGCTGATTCATGTCAATGTATGGCAAAAACTACTACAATGTTGTAATTAGCCTCCAATTAAAAAAATAATAATATAAGAAAACTTGAAAGAGAAGTTAAGATACTAGAAGAAGCAAAAGTGGCTAAGATCACTACATAAACACAGATGTTACCTTGGGAAAGAAGCTGAAATTCTTGCTCTGTTGGAAAGAAGATGAACTTTCTTTAACATCCCACTGTTCCTATACCCACCTCCCACTGATGCTGCTGCTGAAATGCAAGTCAGTCTATGAGGAGGAAGTGATTTTCCTGTTGCACATTGACACCAGAGAATTTGAATAATAAAATGTCATTTACCCAAAAAAAAAAAACCCACAAAAACTAAATCTATGCTTTTTCTTTTTTTGCTTTTGTTTTTACTCCACCTCTCTCTTTGGGCTTCCCTGGTGGCTCAGATGGTAAAGAATCTGCCTGCAATGCAGGAGACTCATGTTCAGTCCCTGGGTCGGGAAGATCCCCTGGAGAAGGGAATAGCAACTCACTCTTCCTGCCTGGAGAATCCCATGGACAGAGAAGCCTGGCGAGCTACAGTCCATGGGGTTACAAAGAGTTGACTGAGACTGAGCAACCAACACTTTCTCTTCCAATACACTGAGAGTCGTTTGAGGACAAGCACAGCTCACCCTGTTGACTGATAGATTGTCTACCCACAGTGTCTGGACAGTCAACATCCTGTGAGCATCAGCTACTGCTATTCCACAGAGTCTCCAACAACAGAGGGAGGAAACACAAGACTTATGCATTCTTATCTCTGCTTTGAATTACAATTACCTGCAACTTCCATGGCATTCCTAGAAAGCTACATTTCGCCGTGGCCCCAGTCATAACACAGAAGAACAAACCTAACCTCGTATTGGATCTCTTCCGTTAGCTGTGACCTCTGCGCCCTGTTGCCTGTGCTCAGCTGCGCTGGTTTGAGAAACAATGCTGCCTGCATGTGTGCCAAGTGTCTTCAGTCGTGTCCAACTGTTTGCGACCCTGGGTGTGGATGCTCAGAGTGAGGCAGGATCAGCCTGCATCCTGCATAGTCTCAGCTCCAAACTCCTCTCCTGCTGCAGAGCCTGCTCTCCTGTTTCCTGCCCTGAG EMBV3_08896 TTGGCTTCTTGTAGGATCTGCGCTCCCTTCCTTGGCGATCTCGTCCAGTCCCTGATTTTA Gene BVV0102_128156 + 0 NULL GK000017.2:74983352-74987853 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078413 1 XLOC_047308 Coding TCONS_00078413 XLOC_047308 NonCoding Coding LOC100848859 17:74981684-74985367 j TSS58356 2283 1 TCONS_00078413_6 287 0.0464301357862462 6 0.381586094513851 0.000817307270390199 0.000198994394581091 0.000365507416532965 3.79011622603731e-05 5.17179053841039e-11 2.37125881634535e-06 0.000117502460133768 9.53125568620134e-05 4.20122388727312e-05 0 0.000131250722969866 8.20109069080889e-06 0 0 9.19261421087721e-11 0.000567511214742971 0.00016724823638715 0.000190918177731884 1.73612630827616e-11 8.28276570151112e-11 1.35022566305472e-05 0.000727656187182524 0.000420479235385194 0.00172304718969364 3.93731293656835e-06 1.04414754870125e-11 1.55769243767622e-11 3.78652920896553e-05 8.17698512797177e-05 6.27435382744451e-05 XM_005218248.1 DGCR8 PREDICTED: Bos taurus DiGeorge syndrome critical region gene 8 (DGCR8), transcript variant X1, mRNA. 0.0 1966 100.00 0.47700394218134 XM_005261227.1 TANGO2 PREDICTED: Homo sapiens transport and golgi organization 2 homolog (Drosophila) (TANGO2), transcript variant X9, mRNA. 2e-122 444 83.37 0.183968462549277 TCONS_00078413_6 sp|Q29RZ5|TNG2_BOVIN CV025_BOVIN Uncharacterized protein C22orf25 homolog; 1e-86 265 100.00 0.435540069686411 1 noncoding 0 0 0 0 -0.192287948998682 0.130392630697334 -0.0236048631269547 0.634372110973392 GACGCGTTCAAGAGAAAGCAAAGCAAGGAGCTGAGGAAAGGTGGGCAGCGAAGGCCTCACAGCCAACACCCCCTGAAGGCAGAGGAGGGGATATTCCAGGCAACATCGAGAAGAACAAAGGCCCCGGGGTGGGAGCACGGGGTGGCGGATGACAGCAGTGTGCCCGGGGGAAGAGGCCAGGGCAGTGAGGGTAAGGAGACCAGGACTCCGGCTCTTATCTCGAGAGACAGGCCCCTGGACGGGAGGGTCCAAGCGGTGAGGTCACATGATCCAAGGTCAGCAGTCACGACCAGCCCCCGGGCAGGCCCTGCTCTAAGCACGTTGCACACTATCACTCACCAGTTCTCACACAGCACCGTGAGAAAAAGGTTAAGGACAGAGAGGTTAAGCAACTTGCTCAAGGTCATACAGCGAGAAGGTGGTGGAGTGCTTTACCACCCAGGTAAGGTAGCTCCAGTCTGTACTGCCTTGGATTACACTTACGGTTGAAAAGAACAGCTCTGTGTCCTGAAAATCCCTACGTGGGTAGATAATAGGAGGCACAAGGGTGAGAGCAAAGAAACGAATAAAGAGGCTCACCAGACAGCCTGGACCAGCACGTCAAGCTGGAGGTGGTGAGAAACCGCCCTGAGGAGTGCATGGAGACCGAGGAGACTCCACACTCAGGGACAGAGGTGTCGCGCGCAGAGGTGGTGAAGGCAGCGTGGGGAGTGTTCGGGCGGGTGAAGATCATAGCCTAGGTTTAGACACGGCTACTTGGCACCAAAGTAACACGTGGAGGTGTGGAAGAGGCAGCCAGAAGCATGCAGCTGTCAGAAGGGAGGCCGGGGCTGGAGACGGACATGCAGGTCTCAGGAGAGACAGCGTTAAAATCAGGGACTGGACGAGATCGCCAAGGAAGGGAGCGCAGATCCTACAAGAAGCCAAGACTCACTTCCCTACCCTGAGATCACAGTCAGATTATAAAAGCCCGGAGACATGCCCCACATGGTGGCCGGGGCCACAACGGGCTCAGAGGCGGGCCCTCCCGCCATCGCTACTGCTCCAGCTGACGGCACACACGGATGCAAACCCGGGCGTCAAGTGGACGCCTCCCGCCCAACCCAGCGGCAGAATGACCTCACCCCGTCCTTTTCTCATCTTCCCTCCGCCTCGCATCCCACACTCACTGGCGCCACTGCTGACTGGCCGTCCCCCCCCTTCTGGGTCCCGGGCCGGCACCGCCGCGGTAGGGACCTTGCCCGCCCGAAAGCCCCTTATGGCTTCGGGCCCACCGGACGAGGGGTCTCCTCACACCCCGGGGCCGGCCCGCGCGGAAAGCGAGCGGCGCGGCGGCCCCCGGCCCCGGCCCAGACCCCAGCGGGCCCCGCGCCCGCGCCCTCGGCGCCTCACAAAGGCGGACGGGGATTCCGCGTGGCCGGGCCCGCCCGCGNNNNNNNNNNNNNNNNNNNNNNNNNTGCAGGGACCTATGGGCTGAGCAACGCGCTGTTGGAGACGCCCTGGAGGAAGCTGTGCTTCGGGAAGCAGCTCTTCCTGGAGGCCGTGGAGCGGGGCCGGGAGCTCCCCAGGGATGCGCTGGTGGCCCAGCTCCTAGCTGTGCTCAGCAATGACGAGGCGCAGCTGCCAGACCCAGCCATCGAGGCCCAGGGCAGGGAGTACGTGCGACCCATCCTCAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCGGACTACGGCACCAGGACCAGCACGGTCATCCTTGTGGATGCAGATGGGCACGTGACCTTCACGGAGCGCAGCATGCTGGGCTCGGACCCCACCCGCTGGGAGACCACTACCCATGAGTTCCGGCTGCAGAGCTAGCCCGCAGCCGCTGTGGCTGGGGCTCCCGGGAGGCCCTGTCACAGGCGTGCCACCCACAAGAGCCGGCCCCACGACGAGTGCCTCTCACCCTTGTGTGCTTCGTCCTGTGAGTCTCGCCACGATCCAGACACGACAGTGGACGTCCGCTTCAGAGCAGCCCCTCCTATCCTGGCCATGGTCCACGCTGACCCCGGCCCTGCTCCTGGAAGGGGACGGGCCCTCTGGAGGGATGAAAGCCTCTCCCTAGGTAGACACAGCCTGGGGCCACCCACAACGGGTGTCCATGCGCACTGCGCTGCCCGGGGCTCCCAGCTCGAGGCAGGCCCGTCTCAGGGAGGGCACACAGAGGCCCCTGCCGTTCTCCTTTTCCCGAAGAACTAAATGGCATAGGACCCTGTACGTGAATGGGGGATGCTGACAATAAAACTGAGGCCAGTGCAT EMBV3_03599 CAGATTTGGGACACAGCAGGCCAGGAAAGATACAGGACTATCACCACAGCCTATTATCGC Gene GeneID:338100|RAB3C:NM_176873:6_cdna Constitutive 0 NULL GeneID:338100 20 GENE RAB3C NULL RAB3C, member RAS oncogene family EMBV3_15651 ACTGGCCATCGCACTGAAGGCATACAAAAAGAGGCTAGTTCTGTTCCGTGGGGAAACCAT Gene GeneID:529060|KEL:XM_002687110:436_cdna Constitutive 0 NULL GeneID:529060 4 GENE KEL NULL Kell blood group, metallo-endopeptidase EMBV3_37705 TGAATGTCAGCCAGAAGCAGACTGGGACTTCCTGTGGTCCAGTAGTTAGGTCTCAGCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28545 AAACGGATGTGTGGAGAAAAGACAGACAAGTACACTCTTGGGGCTTGTTCAGTCCGCTGG Gene GeneID:520147|LHFPL3:NM_001104984:129_cdna Constitutive 0 NULL GeneID:520147 4 GENE LHFPL3 NULL lipoma HMGIC fusion partner-like 3 EMBV3_07728 TCTGGATTCAGTGGGTCATTGGGCACCTGACCGATAAAGACCTTCTTGCGTTTCTTTCCC Gene GeneID:521303|METTL11B:XM_002694030:34_cdna Constitutive 0 NULL GeneID:521303 16 GENE METTL11B NULL methyltransferase like 11B EMBV3_40355 GCCGAGTGACACAGGCAGGCGACATCATCTGAGTACTAACTTCTACTACATCCAGACAGA Gene GeneID:100295922|LOC100295922:XM_002685030:212_cdna Constitutive 0 NULL GeneID:100295922 1 GENE LOC100295922 NULL hypothetical protein LOC100295922 EMBV3_40241 AGTGAAGCCAGGATCTGAGTAAGTGGATCTTTTTTCCCCCAGTGTCCCTGTGTCTCGGCT Gene GeneID:538638|BBS10:XM_002707818:81_cdna Constitutive 0 NULL GeneID:538638 5 GENE BBS10 NULL Bardet-Biedl syndrome 10 EMBV3_24475 TTTGTGGACTCCCAGTATCACTTGTCAACGGGCTGGGGACCCTGACGGACTGAGAGAAAT Gene BVT0102_161207 + 0 NULL GK000010.2:65609641-65645481 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40395 GGGATTCCAAGCTCTCGCTCTCTCCCAACCATGGGTGATATTAGGCTTGTTCTCAACCTA Gene BVT0101_024079 + 0 NULL GK000019.2:52685499-52718545 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094474 1 XLOC_057457 Coding TCONS_00094474 XLOC_057457 Coding Coding NPTX1 19:52679103-52689914 = TSS70655 6445 1 TCONS_00094474_3 432 5 0.404255319148936 1.23341248057872e-11 4.98264161720986e-12 3.28716118701117e-12 5.20973233683308e-12 2.20932940485673e-12 1.52004822610212e-12 0 3.15716721145552e-12 0 0.000750118798902003 0.000534441144399933 0.000232183765701005 9.80963136234642e-13 4.23322619638376e-05 4.19571303189233e-12 0.00288294113459186 0.000869599296079801 0.000936288097006767 0 3.3474496518893e-05 1.96405371614047e-12 0.000793447861012063 0.00149602770742155 0.00142804953182828 1.55222037064787e-06 2.26031600261457e-12 5.15906206335113e-12 0.000467963136801763 0.000321305466452563 0.000740219966213148 NM_001192354.1 NPTX1 Bos taurus neuronal pentraxin I (NPTX1), mRNA. 0.0 3660 100.00 0.31466252909232 NM_002522.3 NPTX1 Homo sapiens neuronal pentraxin I (NPTX1), mRNA. 0.0 3003 84.16 0.436307214895268 TCONS_00094474_3 sp|Q62443|NPTX1_MOUSE NPTX1_MOUSE Neuronal pentraxin-1; 0.0 854 97.45 0.997685185185185 2 coding 0 0 0 0 -0.0791602676897065 0.600981078071183 -0.0235168706585628 0.668461568977734 GGGGGCCGGACAGCGCGGCGGTGCGGACTGCGCGGCGGAGCAGCCAGCAGCGCGGCGCCCAGAGCGCGGGCCGCCCGCGGAGCCCTAGCCGAGCCGAGCCGGGCCCGGAGCGCCGGATCCCAGCGCCCGCAGCCATGCCGGCCGGCCGCGCCGCGCGCACCTGTGCGCTGCTCGCCCTCTGCTTCTTGGGCAGCGGGGCCCAGGATTTCGGGCCGACGCGCTTCATCTGCACCTCGGTGCCAGTGGACGCCGACATGTGCGCCGCGTCCGTGGCCGCCGGCGGCGCCGAGGAGCTCCGGAGCAACGTGCTGCAGCTCCGAGAGACCGTTTTGCAGCAGAAGGAGACCATCCTGAGCCAGAAGGAGACCATCCGCGAGCTGACCACCAAGCTGGGTCGCTGCGAGAGCCAGAGCACCCTGGACGCGAGCGCGGGCGAGGCGCGGACGGGCGGCGGCCGCAAGCAGCCCGGCTCGGGCAAGAACACCATGGGCGACCTGTCTCGGACGCCGGCCGCTGAGACGCTCAGCCAACTCGGGCAAACTTTGCAGTCGCTCAAAACCCGCCTGGAGAACCTCGAGCAGTACAGCCGGCTCAATTCCTCCAGCCAGACCAACAGTCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCTGGAGAGGCAGGTGCTGTCTCGGGTGAACACTCTGGAGGAGGGCAAAGGGGGCCCCAAAAACGACACCGAGGAAAGAGTCAAGATCGAAAGCGCCCTGACTTCCCTGCACCAGCGGATCAGCGAGCTCGAGAAAGGTCAGAAGGACAACCGCCCTGGAGATAAGTTCCAGCTCACATTCCCACTGCGGACCAACTACATGTACGCCAAGGTGAAGAAGAGCCTGCCGGAGATGTACGCCTTCACGGTGTGCATGTGGCTCAAATCCAGCGCGGCACCGGGGGTGGGCACGCCCTTCTCCTATGCCGTGCCCGGCCAGGCCAATGAGCTGGTCCTCATTGAGTGGGGCAACAACCCCATGGAGATCCTCATCAACGACAAGGTGGCTAAGCTGCCCTTTGTAATCAATGACGGCAAGTGGCACCACATCTGTATCACCTGGACCACCCGGGACGGGGTCTGGGAAGCCTACCAGGATGGCACCCAGGGCGGCAACGGCGAGAACCTGGCACCTTATCACCCCATCAAGCCACAAGGCGTGCTGGTGCTGGGCCAGGAGCAGGACACTCTGGGTGGCGGGTTTGATGCCACCCAAGCGTTTGTGGGTGAGCTGGCCCACTTCAACATCTGGGACCGCAAGCTGACCCCGGGGGAGGTGTACAACCTGGCCACCTGCAGCACCAAGGCCCTTTCCGGCAACGTCATCGCCTGGGCGGAGTCCCACATCGAGATCTACGGTGGCGCCACCAAGTGGACATTCGAAGCCTGTCGCCAGATCAACTGAGGCCTGGGGCTGGGCTGAGCCTCCGGGTCCCCGGGTCCCCAGCCCCCGCCCAACTCCCCCTGCTTGTTCGGTGATGATCCGTCGTCTCTTCTTCTCTCCCTTTCCCCCAGGAATGACTCAAGGCCATCGCCCTCGCACATGCGCACACGCACACAGCCTGGTCTCGTCCTCGTGCACGTGAAGCAGGCCCGGCTCCCATCTGCCGCAGGTGTCCCCTCTTCTCTCTAGGAGCCCGCGCTGTTTCTCAGGCATGCCCTGTTCACCACCGACACTGGCGGCTGAGACATTTTGAAAAATGCACACGTAGGTGAGAGGACCCGTGTGTGAGTGTGACTGTGTGTGTGTGTGTCTACAAGGATCTGTCTCTCAGGGGAGGCCTTCTCTTTTAAAATGAGGTATTCCTTTTCTTCTTTCTCTGTGGCTTTGGGAAGTCTCATGACTGGTCTAATCTCTGCACTTGCCAACTTTGGTGGCTGCCCGTGTGCCTTGGGGCTGGTGCAACTTCTCCTGCCATGCGTTCATCTTTGTTTGCAAACCTTTTTCAGAGCGACATATCTCTATATTGATAGAATAAATATCTTTTAGCGCTTTGTTAAAGGCTAGGGACCTCTCCAAGGAGAATTTGTATTTTGTCGTAGAAGTAAATTCTCTCTGAAGGGTTGAAGGCAGACCGTGTCCTGTGATGGCACCACATGCTGGGAGAGGGCAGAGGAGGTGGCACCAGCCTCAGGAGCCAGGCATCCTGCTGTTGACCTCTGAGGACAGCACTGGGCCTGGGAGGCTGGCCTGCCCACCCAGCGTAGCCAGCTCTGGCCCAGTATCCCATCTGTGGCCCTCAGCCTTCCCACCTCCCCAAACTCCCCTCCAGCGGCCAGCTGGTGACCCCAAGAGAGGAGCATCCCACCCATTGCCCAGGAAGCCAGGACCTCTGGACCCTTCCCCTTGGCCTCTGGCAGTGGACGACTTGAGGCTTCAGTGGGTCAGCTGGAGAACAGACCTTTTAGACCAGGAAACCCACACTCTGATTGATACCCAGCCATGTAAGGCCACAGCCAGTCAATGGGCCAGGTCCATGGTAACTCTGACAGCCATATTCTTTACCCAGGCTGAGGCAAGTCCAGAGACCTCTCCATGGAGAGCTAGGCATGGCCAGGCCGGGGCCTGAAACCCACTCCCCCTCTTACAGAGCTCAAGTTCTGATGCAGCCCCCAACCCGTCACCAGCTGGTGACATTGACACCCAATCAGTGTCCAGAAGCTTTGACATTTTTTCTCCCCATGAAAAACTAACATGTGCGTCTCCTAGTCCTTCCAAGGTGGGGAGAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGCGCACGCACGCGTGTGTTGAATGAAAGAGAGAAGAAGAGCACTCAGACGGATCACGCCCAGGGGAGGGTGAGCTCCCTGCTTTGTTGCACCATCTGGGGGTCGCACACCCAAGGGCCACCTGGACTCCATCACCAAGAGTCTAATTAGCAAAAGGCTGGCAAGTCTTTCTAGAAATTCTACTGCACTGCCTGGCTCATCTACAGCTGCAGACATTTCTTCAGCAGGAGCAGGTGTTCTGTCTTCTGTTTTTTCCAGAGGCACCTGTCTCCTTAAACGCAGGTCCGTGTTGTGTCGGAAACCTAGTGCATCTGTGTGTGTCTGTGTTGGTGTTTCTGTGTCGGTGTCTGCGTGGGTGTCTGCACGGTACCCAGTCGCCATTCTGCAATGCATCACTCTCGTGCCGAGGGTGAGGTCCAGGCGCCGGGCTGCGTGTTGTGGTTCAACAGTGGCTTTTTTTCTGAGACCATTGTGCTTTGTCAGAGCCTGTCCGGCTGTGGCATCTGTGGATCTGCAGGGATCTTCTCGTTTGCATGTTCCTTGGGGCGGTGTGTCCCTTGCTTCCTCATTCTGGTGTGTGTTCCCCTGCCTGCATGAACTTCTCTGGTTCTGTGTTGTGTGCCCAGTGCCACCCCTTGTTCTGTGACCATCCATGTAGCTACTGAAAATGGCTGGGTAAGCAAGCCAAGGGTGTCGGAGGAGGTCACGGGAGAGACAGAGTCCCTCTCCCCCTCCCCACTCCCCAAACACACCAAGAAGTATTTTTAACGTGTAGGTTGAGAACAAGCCTAACATCACCCATGGTTGGGAGAGAGCGAGAGCTTGGAATCCCCCTCTAGACCAGATCAGCCCCACCCCTCACTTCAGCCATCTCGGAGCTGTAGGCAAGGCCCAGAGTGTGCTAGGTGCTCTCCTTCGGCACCTCCCACCAGCCCCTGCCGATCTAGCGATCTATCGGACCCCAGACCACCTTCTGCCCCAGTGGGCGCGGTGGGAGCTGTCCATTCAGGACCACAAGCCATCCTCTGCCCTAACTAAAGGTGGGCAGAGCACACCTGTGTCCCTTTGGCCTCCCCTCCCCGACCTGTTCACCCTCCTCGCCCCTCCCCTGATGCACCCATGGTGCCAGGGACAGAAGCTGATGTTTAACTCCCTCCCCCACCCCAACTGGAGCCTGTGCCAAGCCCCTGGCTCCCTCACTGTGTTAACACTTGGCACTTCGCCAGCCCCGAGAAAGGTAGATGACACAGCCACAAATCTAATCCACATAGTTTCCATCTACTCCTTAATCTGATTGATGTTCCCTCTTGCACTGAATAATACATGCCTATCTCAGGTAAGCCATTTTATAAAATAAGGAGATAAAAAAGCACTGTCGAGACAGTGTTTGCTTTTGCCGAGCTGGCGTCCCACAGCTCCCTGGGTGTCCGAGGCGGCAGAGCTACTGACAGAGGCTCTCCGGGCCCTCAGGGGCTTAGAGCCCACTTGAATCGTAAGCCTTCTTGCTTTTGATAACACAGTATTATTTCTCTTACTCTAGAAGAAAAAGTTTATTACCAAAACAAGAGTATTTTTATGAAAGAAAAGGACAAACCTATAAATTAACTCAACCTATATTTCCCTTGAAAATACTTTTCAGGCTCCGCCAAAACGTAGAACTGAAAGCATGTATTTTGGAAGAAAGAGATACATTTTGTATGCTTTCTGTTCCTTTTGTAGATTCACAGTTTATTTTCTAAGACTGCAAAGATCACTTTGTCACCAGCCCTGGGACCTGAGACCAAGGGGGTGTCTTGTGGGGAGTGAAGGGGAAGGGAGAGGCTGGCATGAGGGTCACAGTTATTCCAACGAGCTCCAGAGAGGGGCCACCTGTTCTCAAAGACATGTTGGGGACTGGATATGCTCTGGTTCCTTGATGGTGGCCCCTCTGTCTTGGAGCTGACTTGTCAAGTGGAATGAGTAGAGAACTTGATGGTCAGTTCCAACCCTGATAGAAGGTACTAGGGTTCTGAATTGTGAACATTAAGAAGATGGTATCCTTTGTAATCTTATGGCAACCAGAACGTGGCTTAAAGCAGTCATGGTTTCATCTCTTAAAACACAGTGTGTAAATTTATTCAACTAATGATGGGAAATGTATCACTTCTATGTACAGCGGACTTAAGTGCCATTTGTTGAAAGGGAACAAGTCATCGAGAACAAAAAAGCCCAATACTTAGAGTCCCAATTTTGTCTTATTTGCCAAAAAAAAAAAAAAAAATCAACAATGACAAAGCAAACCCCCTCTGGTTGATATTGTTATATTGTATATACTGTATAATAGGAAAGAGAATTGATGTATCTTACTTTTTCATTATTTGCTAACCAAAGCTGTACATTTTTCATATGATCCACAGCCTTTTGGGTATCTAATGGGTCAAAACCATGGGACCTGCCACCTCCCATCAGCAGTTCTGGAAATGCACTATTTCTACTGGTATTCTTGCTTTTTTTTCATTTTCTTGCTGAAATGACATGAATTGTTGAGTTTATTTTTACACAGTAAAGAGTGAAGAAAGACTGTGGTCTCCTTGGAATATCTCTTCTTTCCTCAAGCTTGCAAATGTCATCTCAACCTACTGGGTGACCTCAGGGGCCCTCCCAGGATATGCCCGCCTACCCATTGCCCTGTGCCCCTCAAAAATCCCACAGCCACCTGGTGATAGTGGACATCAGGTGTGGGGAGGGGGCCTGCCCAATTCACAGGTGCAGCCAACACCAAGGCAGAGAGCAGTGAAGTGATTCTGCAGTGTGTAGAGACCACACTGGGGCTTGGATTGCAGAGTATCTGCCTGTTTCTCACCTCATCTGCAGCCCTACTCCCTCCTGAACCAATGCACTGCCCACAGCACACCTGGCTACAGGTCCCAGGTGGTCTGGGCTTGTCCTTCCCAAGCAGCCCTGCTCTCCTTTGCCACATCCCTTCTGACACATCCTTAGGGTTCCCAGGCTGTTTCCCTGCACTCAAGCAAGACAGCACCCCCAGGTTCACATAACAAGAAGATGGCTGATGTGGGAACCCTGCGCACTGAAAAGAACTCAGTTCCCTGGCCCCTCATGGGCCAAGCTAGCCACTGGATGGACATGGAGCTGTGGAGCTGTTCCCTTCTGTGGGATAAAATCAATGAGCATGAGTCAAAATAACCTGCCTGGTTGATTGGTCTCCCCCATGCCCCAACACACATGCATGTGCGTGCACACACACTCCATACACACACACACATACTGAGTTAACAGATGGGACTTGGTCAGGACTCAGGAGCTGGAGTTTGGTGGAGTGTAAGTAGGCTGCCCATTGCCTGGAGTAGTATGTACAGAGGGGGTTTGGCCTCAGAGCAGTTGACCACTCACCCTGTTGACCCTGCAGTAGGAACCCCAGTTGGGAGAGAGAAACCCCTGCCAGGCTGAACACCCTGGGCCTGTTAGTTGCCCTTGGTGTGCAGTGTCCACCTGGAGGCTGCACACGTGTGGCTGGGCCCAGGGTTATACTCAGTGCCAGCAGCTCAGGCCAACACACCACCTCTTTGCCTCCCACTCGCGCAAGTGCATAGTTATGTCTGTAATAACATCACTCTTACATTTCTAATTTCTATGAAACAGCTCAT EMBV3_34233 ACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACGACCTCAG Gene BVT0102_032479 + 0 NULL GK000030.2:69691980-69887077 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00250681 TCONS_00220566 TCONS_00118040 TCONS_00238581 TCONS_00207934 TCONS_00210913 TCONS_00174805 TCONS_00171428 TCONS_00206300 TCONS_00175564 TCONS_00207933 TCONS_00174806 TCONS_00253104 TCONS_00219592 TCONS_00118487 TCONS_00250203 TCONS_00002600 TCONS_00123823 TCONS_00001867 TCONS_00242415 TCONS_00001866 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00001865 TCONS_00174807 TCONS_00232829 21 XLOC_105290 XLOC_153624 XLOC_133883 XLOC_072206 XLOC_145248 XLOC_126448 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_124877 XLOC_105345 XLOC_156045 XLOC_132911 XLOC_072644 XLOC_153146 XLOC_000643 XLOC_075375 XLOC_000454 XLOC_149079 XLOC_083377 XLOC_142312 Coding TCONS_00123823 XLOC_075375 NonCoding NonCoding - 21:34656367-34662647 - TSS92582 6280 3 TCONS_00123823_4 92 0.992675159235669 1 0 3.77134517527418e-05 4.21711484909763e-05 6.36514048010475e-05 3.23976139061837e-05 6.15331922129947e-05 3.61700959405924e-05 1.61526940260824e-05 6.0735715796653e-05 3.88954490514635e-05 0.00595356662766109 0.00300315911924533 0.00173409760772519 0.000118225667385741 0.000425361799399912 0.000169227460384902 0.0482497752055065 0.0251893156191683 0.0387135172272996 1.57274342601737e-05 1.68872656173388e-05 1.65937901894413e-05 0.0286143890436025 0.0366562465344312 0.0402979952275959 2.89694279046929e-05 2.21167479186835e-05 1.12648953241591e-05 0.0178434173707148 0.010300482077611 0.0272490970592757 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1490 91.55 0.167197452229299 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 3e-30 140 64.52 0.133917197452229 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 TTGTTGTTGAATCACACGAATACACCAGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTACTTCTGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGTAAAAACAAAACAACCAGAATTAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTACAAAGTGTTTGCACCAGTCCATTCTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCATGGGAAGCCTTTCACTGACGAAGAGGGGAGTGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAAGAGTGAGCCCAGGACAGGAGGACATTGTCTTGAGGATCCAACGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCATAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGGCTAATGAGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCGTTTTTCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTTCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGCCCCAATTACTCGTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGTCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCTTCTGTCTCAGCACAGAGCAAAATATCTACATATTGTAACACCACTGCTTCAGAGCTGTTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTGCCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCCTTAACTTCATGTTTCAGTGGATAGTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTCATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGATGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACACCTCTGGGGGCAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGAGCATTTTTCTCAGGCTATTTAAGAACGTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGACTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCTGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCATTCTCCCTCTTCCCTACTGATTCATTACCAAGCCATTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGATCATAAAGCAAAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCTGGTACGGGGGCAAAGGAAGAGGACAGGAGGGAGCTGAAGGTTTCACACCCAAATCTATACCCTTAGGACGTAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGTAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAGGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCGCCGTACTCGTCCCTCCAGGTTCTACCACCGGGATGGGGTGGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACCGCTGTAGGAAACATTCGTCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGACCACAATAAGACCGACGCAAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCTGGCATTACCAAAGAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTCCGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACGAATCCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATATCTGGTCGGTTCCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAATGCCCCGACAGGTTTCTGCCATAAGCTGTATGAGATCACCATGGAACCGCAGAGCAGGGCCCCTTACTTGCTTCATGCAGGGCATGCCATTCATTCACACAAGCACACGGTAGAGTTAGTAAAGCATGGCAGAAAACGTGTTCGCTAAGAGAACAAAGAACTAAAGCTCCAAGCTTCCTTACCTTGTCCTGAAGGATCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACACGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 4739 TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 11018 EMBV3_04893 ACTTTGGCATCGTGGAGGGACTTATGACCACTTTCCACGCCATCACTGTCACCCAGAAGA Gene GeneID:783612|LOC783612:XR_083602:182_cdna Constitutive 0 NULL GeneID:783612 2 PSEUDO LOC783612 NULL similar to Glyceraldehyde-3-phosphate dehydrogenase EMBV3_42741 CCAGGAGTCAAAAGCATTGCTGAGGGACACAGTCCTGGCTGCCCCCAAGACATGAACCCT Gene BVV0102_456358 - 1 EMBV3_17606 GK000008.2:73088395-73147843 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09613 GAGGTAATGGAGAACAGACAGCTCGTGAACCAGTGTGGATGTACAAATGGCAACTGAAGG Gene GeneID:529962|ZMYM4:XM_002686481:556_cdna Constitutive 0 NULL GeneID:529962 3 GENE ZMYM4 NULL zinc finger, MYM-type 4 EMBV3_06652 AAGTCTTTCCCCTAAGATCGGGAACAGGACGATGGCGCTCGTTCACACCACTACAACATG Gene BVV0102_009245 + 0 NULL GK000021.2:65925081-66063574 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33678 ATGCTTCCCAGAAGTGTTAAGTTATCGTGAGTAGAAAGATGGAACTAGAGGCAAGAGGGG Gene GeneID:521540|CCT6A:NM_001034542:347_cdna Constitutive 0 NULL GeneID:521540 25 GENE CCT6A MGC128096 chaperonin containing TCP1, subunit 6A (zeta 1) EMBV3_05166 TATTAACTGATGCTCTGCAGTCTCCTATGGTCTGTGACCTGTGTGCATGGATCACCAGCC Gene GeneID:767899|B3GNT5:NM_001076979:64_cdna Constitutive 0 NULL GeneID:767899 1 GENE B3GNT5 NULL UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 EMBV3_09524 AGTCCCATGTCCAGAGGACCCATTCTTCAGACAGGAGTGATCACATCTCTAAGCCCCTTT Gene GeneID:528483|DDX10:NM_001076881:11_cdna Constitutive 0 NULL GeneID:528483 15 GENE DDX10 MGC142480 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 EMBV3_09022 AGGTGCCTTTTGGGGGAATGGAGAGCCTAAATTCTTCACCAGCCGTGCTTCAGATGTTAC Gene GeneID:615762|IL1F9:XM_002691347:167_cdna Constitutive 0 NULL GeneID:615762 11 GENE IL1F9 NULL interleukin 1 family, member 9 EMBV3_28970 AACATGTCATCCCCGCCTCTGTCTCCACACAGCCTCCTCTTCTTCACACGGCTCTCCCAT Gene BVT0102_419682 - 1 EMBV3_14224 GK000024.2:54177823-54186471 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42088 TGCTCCGTTATGCCATCCAGAGAGGTGATGCCAAACTTCGAGCCCACGTGATTGACAAGT Gene GeneID:516214|RENBP:NM_001046223:61_cdna Constitutive 2 NULL GeneID:516214 X GENE RENBP MGC137226 renin binding protein EMBV3_43545 TTCCCCTCTCTGCACGGTGCGCAACCGGTACATTAGATTATCCCAGCTGCGGCTGCGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40808 TTATGGAAGGCCACCTCCACTTTGTTCTTTGGCATCTTCTCCAGCTCCAAATCCCATGGC Gene GeneID:529412|FAM26D:NM_001101133:19_cdna UTR3_Alt 2 NULL GeneID:529412 9 GENE FAM26D NULL hypothetical protein LOC529412 EMBV3_37455 GGACTGAATGACTGGCTGCAGTTATGGAAAGAAACAAGGTGAGATTTCGGATCACCTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30545 GAGCTGCGCACCGCCTTGGGCGAGGTGAAGAAGATCTGCCACCTGCGTCTCGCCGACCTG Gene GeneID:518364|PRHOXNB:NM_001099703:46_cdna Constitutive 0 NULL GeneID:518364 12 GENE PRHOXNB NULL parahox cluster neighbor EMBV3_19812 GCTCCTATCTTAAATTCCTTTAGGCAGTTAAGAGGGAAGTTCAAAGTTTCTTCCTGAGTC Gene BVV0102_144407 + 1 EMBV3_03739 GK000018.2:15219205-15282115 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19803 AGGGGTTCATGGGCCTCTAAGCCTATCTATGTGTTCCAGGTTAAGCCCTCTGTTAACGGT Gene GeneID:540919|LOC540919:XM_002693474:89_cdna UTR3_Alt 2 NULL GeneID:540919 15 GENE LOC540919 NULL similar to EMSY protein EMBV3_42519 GTAAAGCAAAACAGAGCCGGAGTGAAAAGAAGGCACGGAAGGCTATGTCCAAACTGGGTC Gene GeneID:781381|LOC781381:XR_083742:25_cdna Constitutive 0 NULL GeneID:781381 8 PSEUDO LOC781381 NULL similar to nascent-polypeptide-associated complex alpha polypeptide EMBV3_22394 ACCTCTGAGGTTGAAGCCAGCTTGGAGGAAAGGGTCATTGCTCCATTTGCAATCAAAGGG Gene GeneID:504800|LOC504800:XM_002698084:95_cdna Constitutive 0 NULL GeneID:504800 25 GENE LOC504800 NULL similar to Apolipoprotein B48 receptor EMBV3_31599 TCGTAAAATCAGCTTTCCTACTTCTGGACCATTTATTTGCAGGGATAAACAGACTACATG Gene GeneID:539474|RBM11:NM_001040567:12_cdna Constitutive 0 NULL GeneID:539474 1 GENE RBM11 MGC127108 RNA binding motif protein 11 EMBV3_34102 CTGAGCCATTGGTCTGTCCCTTTCTGGAAGCCCACCTGCCTCTCTCATGATCACTGCCCT Gene GeneID:509859|TRANK1:XM_002696940:507_cdna Constitutive 0 NULL GeneID:509859 22 GENE TRANK1 NULL tetratricopeptide repeat and ankyrin repeat containing 1 EMBV3_43261 ATGGGATTTAATTGTGTATCCTCATTACTGTATCATTTGTGGGGTACACCCCTCCTCCCC Gene GeneID:508045|PPP2R2A:XM_002689788:19_cdna Constitutive 1 NULL GeneID:508045 8 GENE PPP2R2A NULL protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha isoform EMBV3_24867 GCAGCTGTGTTAGATGTGTGGATGGTTGTTAAGTGGAATACAGAATAGCCTTGCTCTAAG Gene BVV0101_019724 + 0 NULL GK000004.2:49257717-49263404 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181575 TCONS_00181577 TCONS_00181576 TCONS_00181569 1 XLOC_110635 Coding TCONS_00181569 XLOC_110635 Coding Coding DLD 4:49111198-49259913 j TSS135861 4411 1 TCONS_00181569_3 397 0.132396282022217 14 0.970433180467206 0.000287471468721203 0.000430224510527539 7.03815787840168e-05 3.74222936232921e-08 7.10929430457702e-08 0.000126093592362555 0.000274969192557034 9.94949311226581e-07 2.29110844498094e-06 0.000597709485543489 9.66823501434438e-05 2.00758409074499e-08 2.12963582014944e-08 4.12474898148614e-13 1.92200513193471e-07 2.85175792417384e-07 0.00322167750734951 0.00398147379746428 1.7741644990007e-07 0.000616811601364328 4.55906770386128e-08 0.00211348314340327 0.00326829753069616 0.00309276830202838 8.61527523291397e-08 5.87488701318867e-05 8.47662968327675e-05 1.85654670587842e-06 7.95572007019194e-09 0.00127490769454809 NM_001206170.1 DLD Bos taurus dihydrolipoamide dehydrogenase (DLD), mRNA. 0.0 3907 99.86 0.492178644298345 NM_000108.3 DLD Homo sapiens dihydrolipoamide dehydrogenase (DLD), mRNA. 0.0 2924 86.46 0.550442076626615 TCONS_00181569_3 sp|P09622|DLDH_HUMAN DLDH_HUMAN Dihydrolipoyl dehydrogenase, mitochondrial; 0.0 796 98.49 0.997481108312343 3 coding 0 0 0 0 -0.10135132954467 0.492860153939983 0.0356992988557686 0.607843746607749 GCCATGAGCCAGGAAATGTGGGCAGCCTCTAGAAGCTGGCAAAGAGAGGCCATTTCAGTCGAATATCTCATGGTCTGCAAGGAGTTTCTGTAGTGCCACTAAGAACTTATGCAGATCAACCAATCGATGCTGATGTGACAGTAATTGGCTCTGGTCCTGGAGGATATGTTGCTGCTATTAAAGCTGCCCAGTTAGGCTTCAAGACAGTCTGTGTTGAGAAAAATGAAACACTCGGTGGAACATGCTTGAATGTTGGTTGTATTCCTTCTAAGGCTTTATTGAATAACTCTCACTTTTACCATTTGGCCCATGGAAAAGATTTTGCATCTAGAGGAATTGAAATGTCTGAAGTTCGTTTGAATTTGGAGAAGATGATGGAGCAGAAGAGTAATGCAGTAAAAGCTTTAACAGGTGGAATTGCCCACTTATTCAAACAGAATAAGGTTGTTCATGTAAATGGATATGGAAAGATAACTGGGAAAAATCAGGTCACCGCCACGAAAGCCGATGGCAGCACTCAAGTTATTGATACAAAGAACATTCTTATAGCCACAGGTTCAGAAGTCACTCCTTTTCCTGGAATTACGATTGATGAAGATACAATAGTGTCATCTACAGGTGCTTTGTCTTTAAAAAAAGTTCCAGAAAAATTGGTTGTCATTGGTGCAGGAGTAATAGGTGTAGAATTGGGCTCAGTTTGGCAAAGGCTTGGTGCAGATGTGACAGCAGTTGAGTTTTTGGGTCATGTTGGTGGTGTTGGAATTGATATGGAAATATCTAAAAACTTTCAACGTATCCTTCAAAAACAAGGATTTAAATTTAAATTAAACACAAAAGTTACTGGTGCTACTAAGAAATCAGATGGAAAAATTGATGTTTCTATTGAGGCTGCTTCTGGTGGTAAAGCTGAAGTTATCACTTGTGATGTACTGCTGGTTTGCATCGGCCGACGACCCTTTACTCAGAATTTGGGACTAGAAGAGCTTGGAATTGAGCTGGATACTAGAGGTAGAATTCCAGTGAATACCAGATTCCAAACTAAAATTCCAAATATCTATGCAATTGGTGATGTGGTTGCTGGTCCAATGCTGGCTCACAAAGCAGAGGATGAAGGCATTATCTGTGTGGAAGGGATGGCTGGTGGCGCTGTACACATTGACTACAACTGTGTACCATCAGTGATTTACACACACCCTGAAGTTGCTTGGGTTGGCAAATCAGAAGAGCAATTGAAAGAAGAGGGTATTGAATACAAAGTTGGGAAATTCCCATTTGCTGCTAACAGCAGAGCTAAGACAAACGCTGACACAGATGGCATGGTGAAGATTCTCGGGCAGAAATCAACAGACAGAGTATTGGGAGCACATATTCTAGGACCAGGTGCTGGTGAAATGGTAAATGAAGCTGCACTTGCACTGGAGTATGGCGCATCCTGTGAAGACATAGCTCGAGTCTGTCATGCCCATCCGACCTTATCAGAAGCTTTTAGAGAAGCAAACTTGGCTGCATCATTTGGCAAATCAATCAACTTTTAAATTAGAAGATTATATTTTTCTGCAATTTCCTGGGGACTTTTGTAGAGGTCACATTTCTGAACAGGAAATGCTCACAGCTGCAAAAATTTCTAGGACTGAATTAGGAAACTTTTGGAAGGTATTTAATAGGTTTGGACAGAATTGAATAATCTCTTATCTATATTTTAAATAAATTTAATATTGTTTCACTGCATTAATATCTGCAGGAAAAAAGCTACTTATAGTAGCTTCCTGGAAAATTTTCTTCAACCCATATTTTCATGCTGTTTATGAAGGGTTCATTGTCACTGAATTTATGTTAAGTAGCTGTTATCTCTGATACAGGATTTACTTACATGGATGCAACTAGAGTATGGTATGTGAACAGCTCTGTTTGAACCAAGGTGATCAGGTTATTTGAAACTTGGTTTTCACATTGGAAACAGTCATTAGAAGTTGGAAACATGTATAAACTGATGTAAATAAAAAATGATGATCTCAGTTATTTTAATCCCCAATGTCTTGGTGGTTAGAGGTAAAATTTTTGTTCAGATTTTTAAGGTTCTGTTGAGGTCTAAAGTATAGTTATACAGTTAACCAAAGTAAGGCAGTGTATATACAAAAATCAAGTATCAGATGGAGAAGCAATGTATTACAGTGGAAAATGAAGACACAGAAATAAATATGTCTTAAATATTCATTTACTGGTTATTCTGAGTGGATGTCAAGATGGTCCTAGTTTTTTTTGACTACCTCTAGTGTATATTTTTGTTACTCTTTATTATTGCTTTTATAGACCAGGATGTATCTTTTCTTTCCACATTGTAGGACAATACTAAGGTATTTAAAAGGTCATCATCCTTTCATCTGTTTTAGCAATACCTACTAAATGTTTACCATTTATTTTTGGAGAAGCAACCTAAGGGAATCTTTAATCGTCTTTCTTTTCCTAAGTGGATTTCCAGTTTATCCTGTCTGGGTAAAATTGACTTTTTCTTTAAAGAATAATATTTATTGATAAATATTTAAAATGACTGTTTCTTAAATAAGTGTTAAATACTAAAGAGACTTTTGCATAAGTCATTCACATTTATTTGTCAAATTGCAGTGCACTTGATGGCAATTTAAAGGAACATATATTAAGGAAAGTTTGGAGAATATAGTTTATAAGCAGAAGGCTATGCAGAATAAGATATCAGTTGATCGGAGATTAAAGGAAAATGTTTAGTAACCTTCAGGTTTTAATTTATTTACATATAAGTCCATTTTCCTTTTTTTTCCACATGTCCAGTGGTCTTGAATTGTATTACAGTCCTTATAAATCAATACATTCTAAAGACTGGATTCTGTTACCTCTGGAAAATATTGAATTTTTTAGTGAGCAGTTAACTTGATTTGAATGCCAAACTCTTGTTGTCTTTATGTGTGTGGGATGGAGGGGAACGCAGCTGAAATCTCTACTCAATTGTTTTAGCTTCACTTGGGCTGAAGTTTGTACCATGCACGTGTAGTGCACAGGTAAGTCAGAGACTGGACAAGGAATGTGCAGAATTTATTAGACCTGTCTTTTCTGGGGTTCTTCCCCTCATTTCATTTGCTGTTGTTTTCCCCAAACTCTGTCCTCTGATTCCTTAACCAGTAAAACTTGGCTTCTGCTCAAGTTGCCACTTCCTGGGATTTGCCCTCAAGTGAAAAGCTATTAAAAATGAGAATTCCACCCAGTGCTGTTGTTTGAGTGGTACTCTCCCTCCCCACCCCCACCTACTTCTGATTGTTGTCCAGTAACTTTACTTTTTTTAAAATTCAGAGTTTTCAGTTAATCTATAGGAGTGTTGGTCTGAATGTGCTATTCCCTGTTATTGGTAATAAACTGAATCTTTTTAAAATCTGAAATCCCAATATCCTGTGAAGTGCTAATTTATTTAAACTTAAAATGTGTCCTCTACTCTAGGTAGAAAGATCTGATTAAAGAATAGTGAAATATAATTTAATATGGACTACTAGCAGTAGAGACACAAAATAATAGTTAAATGCAACTTTAAAGGTTCTCATTCAGTATGAGAGTGAAAATATATCTGGGAATGAAGTCCTGTATAAAACAAATTTTAAGTGTTCACTTGTTATGTACTAAGTTCTAAGTATTCTCTTGACTTGTGACGATGGGGCTGTTAGTTGCCCAGTTCATTGAGCTGATTAAAATTAGTAATTTCAATGAAAAAGAGTAATTTCAAAGTGAGATTTTTAGTTGTTTGGCTGAAAAGGAATGAGGAGTAGTGAAGGTTTCTACTTCTACTTAATTGTAAGTAAAATACTTATAATCAAGGGGGAAAAAGATTTAGATGTTCTAGCAGATGAGGAGGCACAACCACTTTGTTAGTTATTAGGATTTCTACCTAAATAAGAGTGACAAATAAATGCTTGGAACCAGAAGAAAGTTGCCTTATTGTCGAATTTACAGCTGTTTACATAACCGTAACTTTTGTTTGGGCCCAGCTTCAAATGCAGCTGTGTTAGATGTGTGGGTGGTTGTTAAGTGGAATACAGAATAGCCTTGCTCTAAGGAGAAGGTGTGAAAAAGTCACTTAGGGCCTGGCCTGTTTCCAGCTAACTCAGCTATGAAGTTGACAAAGCCTTGACAGTTATGGTCCATGTATCTTCTTTGTCCTGTGGAATAAGTGATTGTTACCAGATTGTGAAATTAAATAAAATACAATGTAAGATCTGAGAAATGACAGCATCCTTCTGTACTTTTGTAGACCTGCCCCCTTGGCATAAGCAGTGTCCCTAAACGTTGGCTCAGTTTAAACATTCCCCTCAGCAACCCTAGCCCTGTTGTAGGTGACAGCCCTCTGGTTTTTAAATATTTTATTGGAGTCTAGTTGATTTACAATTTGTAT EMBV3_34386 GGCCCAAACTTGATTGGAGCATTTGCAAACTATAGTCCCTCAGCAACAGCCAAAAGGGAA Gene GeneID:504968|ABLIM1:XM_002698530:187_cdna Constitutive 2 NULL GeneID:504968 26 GENE ABLIM1 NULL actin binding LIM protein 1 EMBV3_04569 GTCTCTCTGGGGTTTGCAACTTTCTATAAGAATTTCTTTGGGTTGAGTTCCCTGGAAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05600 CAAGTCCCAGCCCTAGTAACTGTCAACAGGAGAAGCAGAAGATGGTACAGCTGATGGCAT Gene BVT0102_272409 - 1 EMBV3_25182 GK000003.2:3119591-3166688 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00697 GATGGAGACTCCATCCAGTTCGGGCGCTTCGCTGTGCTGAGACCTTGTACCATTCAGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09165 GAGTGGGGAGCCATCACCTTCTCCGAGTATAGTAATAGGAATGAACATTTTGGTACTAAA Gene BVV0102_109776 + 0 NULL GK000029.2:25685431-25949975 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05805 CACAGGCCAACCACATACCTGGGGACAGAAGTGCCACAGAAGGTGAAATTGGAAAAGATG Gene GeneID:532952|MAGI3:XM_002686135:231_cdna Constitutive 0 NULL GeneID:532952 3 GENE MAGI3 NULL membrane associated guanylate kinase, WW and PDZ domain containing 3 EMBV3_01819 AGGGAAACCTGGCCTGCCACTTACTTCTCATCAGGGACCGCATGCCGATTTGTACTTCTT Gene BVV0102_010926 + 0 NULL GK000005.2:110889180-110922858 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201680 1 XLOC_123325 NonCoding TCONS_00201680 XLOC_123325 NonCoding NonCoding - 5:110914998-110915741 - TSS151248 743 1 TCONS_00201680_1 44 1 0 0.00683030417578422 0.0032998867713985 0.00403538488518612 0.00224648174066815 0.0014353040334604 0.000654750514959807 0.00184448308892891 0.0016717216008861 0.00381232315544343 3.32260319795943e-05 0.000101673256545819 7.70001004706202e-05 8.88202618165564e-05 0.000240580885713139 3.30161598118061e-05 0.00085313373645246 0.00418968119980664 0.000574086989785927 0.000704547135296353 0.00164541481007637 3.67719462598253e-05 0.000499371803416821 0.000481544423529645 0.000925100339317204 0.00158525115122574 0.000673254368611088 0.00201876939922838 0.000452464501997811 0.000797120862423653 0.000623072692287548 NM_001080918.1 DNAL4 Bos taurus dynein, axonemal, light chain 4 (DNAL4), mRNA. 0.0 1315 99.46 0.995962314939435 NM_005740.2 DNAL4 Homo sapiens dynein, axonemal, light chain 4 (DNAL4), mRNA. 2e-97 360 76.77 0.678331090174966 0 noncoding 0 0 0 0 0.310882320523803 0.622647304643698 -0.344175863106314 0.0197740729612369 TCAGTTTTTGGTTACTTTAATTGTAAAAACCAAGACATTTATATATAAATAAGACCGCTGTGTAAAATAGGATTCACCCTTCTACTAAAACCCTTCTTCCCACACTCAAAAAGAATATAGAAAACCCAGCAGAGATAAGAAGTACAAATCGGCATGCGGTCCCTGATGAGAAGTAAGTGGCAGGCCAGGTTTCCCTGCTGAAACAGGCCTCGCGGCGAGGGCGCTCCTGGCCCAGGCGTCTCACCGGAGGTCAGTGACACTTCCAGAAACCGCGCAGGCGCGGTTCCCGCACCCTCAGCCCCTGGTTACCAACTGCACACGTGGAGGCAAGGTGGGGGGAGGGCCGGGGACGGGGCGGGGGGCAGGCTGCTTGGTCCTCATGCCAAAGCCAGGGGGTTGTGGAGCTGTCGGCCGGACAAGACGCGGTGGCATGTTCAGCCCGGGGCCAGGCGGGAAAAGGGGCTTCTGGGGGTGGGGTCACCGCTTCTCCAGAAGACGAGGAGAGGGCCCTTAGTGACCCCCTAATAGGAGAGGCTCCCTCGAGGCCATCTGCACACAGGCCCCGTCAAGACGAGAACGGGCGGACGCCTGCCCACAGTGCTGGGTGTGGGAAGGCGTGGGGGCTTAGCAGGTCCCTGTGAGAAAAAAATGCCACCCCCCGCCCCTCCTTTGACCCTGTCACACACACCCCCCCCCCCCAGCCCTCCCCTGCTGCCCCCTCACACCCGGGGACTCAGCGTGAG TCONS_00193407 . 5' 7118 TCONS_00193407 . 5' 7118 EMBV3_38769 TGGAACTTGTGGACCTGTGTGAGTTACACCCAGAAGGAAGGGGAGTTGAAATCAGTTGGC Gene GeneID:534002|LOC534002:XM_002697931:592_cdna Constitutive 1 NULL GeneID:534002 25 GENE LOC534002 NULL similar to serine/arginine repetitive matrix 2 EMBV3_00181 GCAGCCGTAGCTGGGATCGTCGACATAGTAGCGTAGGTATGGACACAGTAAGAGTCCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37013 GTAGCAGCCCCAAGTTCTCAGAGATCTCAGAATCGTGATCGTGCTGAAGAACCGCATCTA Variant GeneID:539190|WDR45:NM_001076151:99_cdna 317^422 2 EMBV3_16004 GeneID:539190 X GENE WDR45 MGC139750 WD repeat domain 45 EMBV3_19277 AAACAGTAACATTTGGGTCACCAGGTTTTCCTGCTACTCCGACTTTTGGCCTTAGGAAAC Variant GeneID:515127|NUPL2:NM_001077923:20_cdna 758^904 2 EMBV3_31424 GeneID:515127 4 GENE NUPL2 MGC134117 nucleoporin like 2 EMBV3_12643 AACCTCAAACCCACCAGTGGCTCTGGATCTAGCCCCAGCCCTGATTCTGCCCTGTCTTCT Gene GeneID:505837|ZNF358:XM_002688853:195_cdna Constitutive 0 NULL GeneID:505837 7 GENE ZNF358 NULL zinc finger protein 358 EMBV3_14901 CCTGGACATAATGGGCAGCGTCTTGGGCTTAATAAGTGAGGAATTCTGGGTTCTGACCCT Gene BVT0102_328382 + 0 NULL GK000025.2:27472845-27475330 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15733 TTGTGTCCAGAAGCCAATGTTCCTCTCCAGTGGCGACAGGGATCTCGGGGTTGCATTCCA Gene BVV0102_276248 + 0 NULL GK000011.2:10814201-10836511 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00178735 TCONS_00240375 TCONS_00149039 TCONS_00148450 TCONS_00033207 TCONS_00178732 TCONS_00149040 TCONS_00149037 TCONS_00218953 TCONS_00050934 TCONS_00098202 TCONS_00123275 TCONS_00063805 TCONS_00230831 TCONS_00117596 TCONS_00167122 TCONS_00168479 TCONS_00185576 TCONS_00098200 TCONS_00207545 TCONS_00186490 TCONS_00206815 TCONS_00098199 TCONS_00240374 TCONS_00154285 TCONS_00066107 TCONS_00131536 TCONS_00098198 TCONS_00185573 TCONS_00149043 TCONS_00178730 TCONS_00161424 TCONS_00253351 TCONS_00101341 TCONS_00088422 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00238291 TCONS_00222176 TCONS_00240373 TCONS_00223049 TCONS_00157045 TCONS_00033186 TCONS_00054136 TCONS_00130054 TCONS_00207410 TCONS_00056187 TCONS_00157046 TCONS_00011614 TCONS_00063809 TCONS_00054134 TCONS_00178734 TCONS_00158779 TCONS_00162571 TCONS_00220551 TCONS_00186835 TCONS_00222177 TCONS_00142474 TCONS_00101073 TCONS_00218948 TCONS_00054133 TCONS_00230354 TCONS_00217533 TCONS_00168478 TCONS_00142472 TCONS_00129561 TCONS_00021875 TCONS_00207544 TCONS_00231774 TCONS_00011613 TCONS_00066112 TCONS_00176791 TCONS_00186489 TCONS_00230829 TCONS_00157808 TCONS_00071703 TCONS_00131535 TCONS_00238280 TCONS_00054140 TCONS_00232767 TCONS_00031770 TCONS_00178886 TCONS_00249554 TCONS_00231772 TCONS_00156869 TCONS_00162567 TCONS_00107100 TCONS_00231775 TCONS_00033206 TCONS_00098201 TCONS_00162570 TCONS_00158314 TCONS_00071451 TCONS_00011296 TCONS_00154284 TCONS_00071397 TCONS_00033205 TCONS_00072307 TCONS_00012044 TCONS_00178731 TCONS_00231776 TCONS_00117597 TCONS_00063811 TCONS_00207543 TCONS_00222175 107 XLOC_090921 XLOC_108508 XLOC_147039 XLOC_090916 XLOC_090330 XLOC_019441 XLOC_108505 XLOC_090917 XLOC_090914 XLOC_132272 XLOC_031050 XLOC_058448 XLOC_074829 XLOC_038531 XLOC_140321 XLOC_071762 XLOC_101958 XLOC_103118 XLOC_111629 XLOC_058446 XLOC_126060 XLOC_112542 XLOC_125335 XLOC_058445 XLOC_147038 XLOC_094045 XLOC_040825 XLOC_080241 XLOC_058444 XLOC_111626 XLOC_090920 XLOC_108503 XLOC_098315 XLOC_156291 XLOC_061582 XLOC_053209 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_144958 XLOC_135485 XLOC_147037 XLOC_136355 XLOC_095505 XLOC_019420 XLOC_031945 XLOC_078765 XLOC_125926 XLOC_033990 XLOC_095506 XLOC_007165 XLOC_038535 XLOC_031943 XLOC_108507 XLOC_097231 XLOC_099452 XLOC_133868 XLOC_112886 XLOC_135486 XLOC_086899 XLOC_061315 XLOC_132267 XLOC_031942 XLOC_139844 XLOC_131531 XLOC_086897 XLOC_078274 XLOC_012548 XLOC_126059 XLOC_141262 XLOC_007164 XLOC_040830 XLOC_106565 XLOC_112541 XLOC_140319 XLOC_096263 XLOC_043473 XLOC_080240 XLOC_144947 XLOC_031949 XLOC_142251 XLOC_018015 XLOC_108659 XLOC_152497 XLOC_141260 XLOC_095329 XLOC_099448 XLOC_063011 XLOC_141263 XLOC_019440 XLOC_058447 XLOC_099451 XLOC_096768 XLOC_043222 XLOC_006847 XLOC_094044 XLOC_043168 XLOC_019439 XLOC_044076 XLOC_007594 XLOC_108504 XLOC_141264 XLOC_071763 XLOC_038537 XLOC_126058 XLOC_135484 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_02761 TGTAGGTGGTGAAGGCATCAGGTGGAGGAACCAAACCCCAGGTCCTAACTTCTGCATTGT Gene BVV0102_084414 - 1 EMBV3_13508 GK000007.2:17885418-17886792 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212179 TCONS_00212180 TCONS_00212176 TCONS_00212182 TCONS_00212177 TCONS_00212178 1 XLOC_130107 Coding TCONS_00212182 XLOC_130107 Coding Coding LRRC8E 7:17880795-17886631 j TSS159275 4779 1 TCONS_00212182_6 796 0.0860012554927809 3 0.181491002570694 6.82131849001272e-16 0.00025212676961158 0.00143837797469455 9.8433742333502e-06 0.000450040235007665 0.000463304633897759 0.00145774376091948 0.00130405883623183 0.000681717352143775 7.79489553666673e-05 3.9736776091291e-10 0.000149112027496253 6.06516376516829e-60 7.00368892886116e-05 3.64019675464854e-17 0.000908221983428349 6.45980335553979e-05 0.000112665335057534 0.00284198986373473 0.000822122413402504 0.000197387438941925 2.88306584598016e-05 0.000147374962770071 0.000784990658840907 0.00108085336938464 0.000741924545438119 0.000292046499122487 0.00034164964437959 2.04377676833375e-05 4.56415100680783e-06 XM_005208732.1 LRRC8E PREDICTED: Bos taurus leucine rich repeat containing 8 family, member E (LRRC8E), transcript variant X2, mRNA. 0.0 6432 100.00 0.745971960661226 NM_001268284.1 LRRC8E Homo sapiens leucine rich repeat containing 8 family, member E (LRRC8E), transcript variant 2, mRNA. 0.0 3034 83.78 0.591964846202134 TCONS_00212182_6 sp|Q6NSJ5|LRC8E_HUMAN LRC8E_HUMAN Leucine-rich repeat-containing protein 8E; 0.0 1511 92.59 0.998743718592965 5 coding 1 1 1 1 0.0558888302059369 0.719952055781394 0.0376729514126256 0.445275873293021 GTTTGGGACTGGCGTCAAGGGTGGGAGATGCCTGGGCTCGGGAAAAAGGCCACACCGACGAGTGGTGGAGCAGCGGCCTCGTGGAATGCCCCTCCTGAACTCTGAGTGGGCAAGCCCAGTCCCATCGGGGCAGGGGTCCCTGGGAACAGAGGTGGAAGGATGATTCCGGTGGCGGAGTTCAAGCAGTTCACGGAGCAGCAACCCGCCTTCAAGGTGCTCAAACCTTGGTGGGACGTGCTGGCCGAGTACCTCACCGTGGCCATGCTCATGATCGGGGTCTTCGGCTGCACCCTCCAGGTGACGCAGGACAAGATCATCTGTCTGCCCAGTCATGAACCCCGGGAGAATTTATCTGAAGCCCCATGCCAACAGCTGCTGCCGCGGGGGATCTCAGAGCCCATGGGGGACCTTCGGGAGTTGAGCGGCCTCAAGAACAACCTGGACCTACAGCAGTACAGCTTCATCAACCAGCTCTGCTACGAGACGGCCCTCCACTGGTATGCCAAGTACTTTCCCTACTTGGTTGTCATCCACACGCTCATCTTCATGGTCTGCACCAGCTTCTGGTTCAAGTTCCCCGGCACCAGCTCCAAGATCGAGCACTTCATCTCCATTCTGGGCAAGTGTTTTGACTCGCCATGGACTACTCGGGCGCTGTCCGAGGTCTCCGGGGAGAACCACAAGGGCCCTGCTGCCACCACAGCTGGGCGGGCGACAGTGACCGTGACCACAACTGCAGGGCCGGGGAAGGCAGGGGAGGGTGAGAAGGAGAAGGTATTGCCAGAGCCCGAGAAGGTGGTGACAGAGCCCCCTGCTGTCACCCTGCTGGACAAGAAGGAGGGAGAGCAGGCCAAAGCCCTGTTTGAAAAGGTCAAGAAATTCCGCGTGCACGTGGAGGAGGGCGACATCCTGTACACCATGTACATCCGGCAGACGGTGCTCAAGGTCTGCAAATTCTTGGCCATCCTGGTCTACAACCTGGTCTACGTGGGAAAGATCAGCTTCCTGGTGGCCTGCAGGGTGGAGACCTCGGAGGTGACGGGCTACGCCAGCTTCTGCTGCAACCACACCAAGGCCCACCTCTTCTCCAAGCTGGCTTTCTGCTACATCTCCTTCGTGTGCGTCTACGGGATCACCTGTCTCTATACCCTCTACTGGCTCTTCCACCGGCCCCTCAAGGAGTACTCCTTCCGGTCAGTGCGGGAGGAAACTGGCATGGGCGACATCCCCGATGTCAAGAACGACTTCGCCTTTATGCTGCACCTCATCGACCAGTACGACTCGCTCTACTCCAAGCGCTTTGCTGTCTTCCTCTCTGAGGTCAGCGAGAGCCGCCTGAAGCAGCTCAACCTCAACCACGAGTGGACTGCCGAGAAGCTGCGACAGAAGCTGCAGCGCAACGCCCGGGGCCGGCTGGAACTGGCCCTCTGCATGCTCCCGGGGCTGCCGGACACGGTCTTCGAGCTCAGCGAGGTGGAGGCGCTGCGGCTGGAGGCCATTGGCGACATCACCTTCCCCCCGGGCCTCTCGCAGCTGGTGCACTTGCAGGAGCTGAGCCTGCTCCACTCGCCCGCCAGGCTTCCGTTCTCCTCGCAGATCTTCCTGCGGGACCGCCTGAAGGTCATCCGAATCAAGTGCGAGGAGCTGCGGGAGGTGCCCCTCTGGGTGTTTGGGTTGCGTGGTCTGGAGGAGCTGCATCTAGAGGGGCTCTTTCCCCCAGAGCTGGCCCGGGCGGCCACCCTCGAGAGCCTCCGGGAGCTGAAGCAGCTGAAGGTGCTGTCTCTGCGGAGCAACGCTGGCAAGGTTCCCGCCAGTGTGACTGATGTGGCCGGCCACCTGCAGCGGCTCAGCCTGCACAACGACGGGGCACGTCTGTTGGCACTGAACAGCCTCAAGAAGCTGGCAGCGCTGCGGGAGCTGGAGCTGGTGGCCTGCGGACTGGAGCGCATCCCCCACGCTGTCTTCAGCCTAGGTGCGCTGCAGGAGCTTGACCTCCGGGACAACCACCTGCGTTCCATCGAGGAGATCCTCAGCTTCCAGCACTGCCGCAAGCTGCTCACACTCCGACTGTGGCACAACCAGATTGCCTATGTCCCCGAGCATGTGCGGAAGCTCCGGGGCCTCGAGCAGCTCTATCTGAGCCACAACAAGCTGGAGACGCTGCCCACCCAGCTCGGCATGTGCTCCAGCCTCCGCCTGCTGGACGTCTCGCACAATGGGCTGCATTCCCTGCCAGCCGAGCTGGGTCTCCTGCAGAATCTTCAGCACTTGGCTCTCTCCTACAATGCCCTGGAGTTTCTACCCGATGAGCTCTTCTTCTGCCGCAAGCTGCGGACGCTGCTCCTAGGTTACAACCACCTGAGCCAGCTTGCGCCCCAGGTGGGGGCCCTCAGGGCCCTCAGCCGCCTGGAGCTCAAGGGCAACCGGCTGGAAGCACTGCCGGAAGAGCTCGGCAACTGTGGGGGGCTCAAGAAGTCGGGGCTCCTGGTGGAGGACACCCTTTATGATGGGCTTCCGGCCGAGGTACGGGACCGGATGGAGGCAGAGTGAAGCCGGGGAGGGAGGACAGGTTGAGGTCAAAGCCTCCTGGATGCTACCGCCCCAGAATCTCTACCATTATCTTCGAGGGAGGTGGCCAAGTGGGCCCCAGCCAGGAGACAAGGAACAAACATGTCAGTTTGATGGAGCCCAGGCAAGATCCTGGGACTGGTTTGTCTGGGAGGCTGTGGATTTGGGGTGGAACATCCTGGAGAGATTAACTCAGTCAGAAGACTCTCAGACCAAAACCACACCTGTGTTTTTGGCTTGGCTGACCTGCCCCTAGCCCTGGGCCAGAGATGCTGCCATCCCCCAGACAGCAGCCACAGTACCGCAGATGGGGGGTGGGGTGGGGGAGGCTCATCCTAGTGGGATTTCAACCCTCTCCCCTGACCAAAACAGCTTACATCTGGGGTTTTCTCCCAACGAGGGGACACAGACACAAGGGACCAACCTCCCCCGCCAATTTTGATATTAATCCCCTATTTATAAGTTGCTTGCTATGGACACCTGAACTCAGAAAGCAATGGTTCTCATATTTGGCTGAAATCAACATCTCCAAAACAAAACATCCGAGGCCCCACCCTTGAAAGGCTGACTCAGGATGTTGGCTGGAGGCCAGGAACTTGCTGGTAAACAGAATCACCCCAGGTAATTCTGATTTGGACCATCCCAGGCCTGAATGTTGGGAAATGCTGACCTACAGAGTAGATATCTGGGTGTTAAGAGCAGGGATTCTGAACTTGGTTTTAGATCTCTAGATTCTTTGAGAAATCTGATGAAAGGTGGGCACCTCCTTCCTTAGGAAAATGCTCATGTTCACATAAGTTAAAAGCTCTGCAGACAACTTCAAGCAATCAACATTCCCCCAGACCCCCCAGGGGGCTATTCATGGATGTGCTAAGGATTGGAACACCTGCAGGGCAGGTACATTTTTCTGTAGGCTGGGACTTTGTCTTTCAATGTTCCCTATGTGAGGGAGTGTTTATCAGTGGGTGCTTAATAAATAACACTATGAGAACCATATATATATTTTTTGGCTGAGCTGGGCCTTCCTCGTTGCACTCAGGCTTTCTCGAGCTGTGGTGCATGGGTTTCTCATTGTGGTCACTTCTCTTTTGCAGAGCACAGGCTCAGTAGTTGCGGCACAAGGGCTTAGTGGCTCCGTGGCATGTGGAATCTCCCCAGACAGGAATCGAACCCAAGTCCCCTGCTTTGGCAGGTGGATTCTTAACCACTGGGCCATCAGGGAAGTCTGAGAATAAGTTTGATCCCTTGTGTCCACTCCTGCCGTTGTCTAAGGCTTCTATTTCACCAGACCAAGTACAGGCAAGTGGCAAGAGTCAGGTTCCAGAATCAAGGCTATAAGCCTCTTCCCTGGGAGCAGAGGCAGAGAGAGACCTTAGTTAACCAGGAGACATCAGGTGGTCGTCTACATAGCCTTTTCCCGTAGAAGTGCCTGTCCTTTACATTCCGTTATTCTCATGGCTCCACAGTTTTGGATCTGCTTCACCTGTAAGTTGTCACCAGGAGAGTCATCAGAAACCTTCAACACCAATCAGTTTTCTCGTGCTAGAGTGGGCAGGGCCTTGGCACAGCCTGCCCAACCCTGACCTCCTGGGCTTCACCACCTCCATGGTGTCTCCAACATGTGAGCCTCCTCCAGGCACCAGAGAGCAGAAGCAAGCTGCTTACCTGGGCGCCCCAGGGTTCCAGATGGGGACATTTTCCCAGCACTCTTCAGGCCAGCTGAAGAAAATGTGTAGGTGGTGAAGGCATCAGGTGGAGGAACCAAACCCCAGGTCCTAACTTCTGCATTGTCCAGGAGCTAAACAGATGAGGGATGCCTTCAAATTTCCCACAGCCAATCTGACTTGGAACTCTCTATCCTTGACCTTGGCCCCACGTCGCTGAGGGCAGGGATCACGCCGCTAGATTCTCACCGTCCAGACAGTGGCCCAAACCCTACCCCGCCCATCCTTCAAGTCCTCGTGGCCAACCCTGACCCCGCTGAAATGGAAAGGGCTTCCCACAGGTGCCTAATTATGGTGAGTAGGCAGCAATTAAGCACTACAGGGACCGTAACGAAGCACTGTCCGAGATGAGAAAGGCAGTTTTGGAAGGCGTGGGTGCCAGCTAGGGCCGGCCGGGAAGAGAAAGAACGAGGCTGAGGATACAGCCTGGCGACCACCGGGGACAGCGGCAGGAAATTTAAAAAAATAAAAAAAGAGCGAGAAACCA EMBV3_21511 TTTCAAAGTCAGGGGCCAGTTTGTGGACAAGAGGCAGTGAGGTCAGAGCGTGGTATGTAA Gene BVV0102_160453 + 0 NULL GK000012.2:36075247-36076446 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24665 AAGGGAAGGACGAGCACTTCGAGTTTGAGGTCAAGATCACTGTCCTGGATGAGACGTGGA Gene GeneID:532276|KIF16B:XM_002692044:10_cdna Constitutive 0 NULL GeneID:532276 13 GENE KIF16B NULL kinesin family member 16B EMBV3_36723 TCATCTACACACATATCCACAGTCACCTTGCCCATCCTCAGGCAGACTCACCCCTGCACA Gene BVT0102_325326 + 1 EMBV3_22412 GK000019.2:48825661-48853112 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05335 GACCTGGTCCGAGCCCACCCGCTTCTGGAGGTAATGGGGCTACCTGCTTGACACACTGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39377 TGGAGCGAAGAGCCCGGACCAAGCGCTCAGTCAAGTCAACATTGCTGCTGTATCAAAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17616 TCCTGAGAAACTCTGAGAAAGGACTAGATAGCAGGGCTTCAGCATTCTGGGCTCCCCACA Gene BVV0102_233192 + 0 NULL GK000019.2:56972760-56975493 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097974 TCONS_00094759 2 XLOC_058391 XLOC_057536 Coding TCONS_00097974 XLOC_058391 Coding Coding ARMC7 19:56957697-56975213 j TSS72479 4221 2 TCONS_00097974_4 150 0.13243307273158 2 0.759120753639737 0.000715708613200663 0.00036810363117356 0.000176825788139165 0.000240123946727452 0.000159548344630517 0.000162139773480416 0.000234716038292487 0.000106144565057258 0.000648241298780535 4.00953890186055e-05 3.32884868480544e-06 1.25616440723999e-39 0.000123678905529401 0.000377869039391024 1.88878989042836e-05 9.76517606245269e-159 8.48313761873459e-113 3.35010978002769e-115 0.000418711637932636 0.000202195927321068 0.000274171254314517 1.86993631798009e-131 3.68531750428669e-171 5.04163929429235e-124 0.000610176747783294 6.05395536654864e-05 0.000682711939933554 1.92417691425409e-26 4.21638916409135e-79 7.31493411902231e-47 XM_005221258.1 ARMC7 PREDICTED: Bos taurus armadillo repeat containing 7 (ARMC7), 0.0 3012 99.94 0.396114664771381 XM_005257667.1 ARMC7 PREDICTED: Homo sapiens armadillo repeat containing 7 (ARMC7), 2e-112 412 70.67 0.220090026060175 TCONS_00097974_4 sp|Q3UJZ3|ARMC7_MOUSE ARMC7_MOUSE Armadillo repeat-containing protein 7; 4e-81 242 62.63 0.993333333333333 1 coding 0 0 0 0 -0.0262197467615435 0.805370412919871 0.0478484594574764 0.320379570874909 GTACAGAGGTGAGGCAAAGGGGTCTGAGCTGGGACGTATCCTGAATTGATGTTTGACTGCCACAATTTGCTGCCTTGACTCTGGGCACGCAGAAAACAGAGAAGGTTGGCCTAGATAAGCTAAGGTCTCTTCCAGTCTGAAAAGTCTGATCCTAAAGACCCCCACTGCCTCCCTGCACCCCATCCTGTCTGCACTTGGTCACCATCCACAGCTTGTACACTGAAGGGAGAATGCACAGCTGGGCACATTTTACCATGTCCTGCCTCCTCCATCTTAACTGAGTGGAAAAGGAGAGAGTTGGGGCTGGTGGGTGGGTGGATACTTTTTTTTTGAAGCACTGCATGCGTGGCATGTGGGATCTTGAAATTCCCTGACTAGGACCAAGGACCAAACCCATGCATACCCCTTGCAGTGGAAGTGCAAAGTCTTAACCACCAGGGAGGCCCCTAGATGAATCCTTTTTGGTGCTAGTAGCCACATGGCTTTGAAACATGCATCCCCTTTTAGGGCCACTCTTGAAAACTTAGTTCTTTTCAAGGAAAAAAGATATCAGTAAACATTTAGGATAGAGAACTTTGACCTCCTCTGCCTGCCCTCCCCGACTCCCTACCCTGGGCAAGAGTGGCAATCATTTCTGGGCAGAATTCCTTCAACAAATATTGAGGAGCTACTGTGTGTCACGAACTGGGCAGAGAGGAGTAAGACCTGCTCACAAAACCAAGGACTTAAGAATTCTTCACAGAGGTGAGGGCCTCAGAAGCCTTAATTCAGTTCAGTTCAGGCACTCAGTTGTGTCCAACTCTGCGACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCCATCTCCCAATTCCTGGAGCTTACTCGAACATGTCCATTGAGTAGGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCTCCTACCTTCAATCTTTCTCAGCATCAGGGTCTTTTCCAAAGCCTTAGGAGGGGACAAGTAATGGAGGATGTGATGGCCCATCAGATTCCAAAACCCACACTTGGCTGATCCTGGGATTCCTCTAGAGAGGGTCTAGAGCAGTTCCTGACCAGTGTGGGGTAGAGCCCACTTCCGTCCTGTCCCTAGGTCTTTAGTGCTCTATCCAAACAGGAGCAGAGAAGCCCCCTGGCCACCTTGGGCTGAGATATACTTCCCCAGGTCGAATCAGCTCTCCTTAGAATGTGAAGGGCCTGGTGAGGGGCCTGGGGTCACTGCCCTGCAAGAAGCAGCCAAGGTCCCCAAGCCCCAGGTGTGTGCGTAGGGCTGGGGCTGATCACAGGCACCTGAGCCCACCAGGTGGGGGCTGCTCCCAGTGGGGCTGTGGCAAGCTGGAGTGTGGCAGTCACTTTGTCCTTGCGCAAGGCCCTTGCCCTCCAGAAACTCACAGCCTAAGCCGCTTCCATCCCCACATTTTCAAGCACGCTGGAGTCCAAGAGGGCCACCTTTCTCCCTGGTGCTCTGTCGCCTGACCCCTTCCTGAGAAACTCTGAGAAAGGACTAGATAGCAGGGCTTCAGCATTCTGGGCTCCCCACAACCCAGAAAGCCACCAAAGTGGTATTTCTGGGGTCGGATGGTGCTGCCCCGGGTGGGCCCCGCCACCTGGCAGGCTCAGCTCGGGACTGAGGAGCAGAGGATACCAGGCTCGCTAATTTCATCTTGGCCTCGCCGCGGGCATACAGGGTCATAGTTCCCCCACCAGGGATTCAATCGTGTCCCCTCCACTGGGAGCACAGAGTCTTAAGCACTGAACCACCAGGGAAGTCCTCACTGGGCTTTTGGGAAGAGCCGACCAGAAGGTAGTGTCAGAAGAGCCACAGAGGGGACACAAGGAGCAGACGCTCGCGTTTCCACGGCGTCCCTTGATGGTGGAGGGGCGGGGACTGCGGCCCATCGCCTAGCGCGGGGTCATCTGAAGGTGCTCCTACCCCGACAGTCCTCCACACAGGCCACCCCGGGCACCTCTGAGCTCCTAAGGGCCCTAGGGGCTCGCCTCAACACAACCGCAGGCTTCAGTTACCACTTCCATCAAGAGGCTGATCGCCGCCTGCAGGAGACAAAACGCTGGAAGCCGGCAGCGCAGGCACGCCGAGCTCAGCGACGGCCCCGCCCCTCGCCTCATGCCTCATCGCCCCGCCCCTTTCGCCCTCTGGGCGTGGCTAAGTGCCGCTTCCCCCGGAAGTCCGGAACGCAGCCGAATGTCCCGCCCAGCTGGGCGCTGGCCCTCCTTCGTACGTCTCCTGCTCCCCGAGTTAGGTGTTCAGTCCCATCTCCTACGAGGTCCTGAGTCCCCACCGCGCCTCCCACAGCCCAGTCTCAGCTGCAAGCTGCTGCAGAGCCTGGAGCCAGGAAAGGAACTCGTTTCCCCTCCCCGGCCCCGCGGAACCAGGTGGGGTCCTCGCCCCGCTCCCCAGCCTCGCCTTCCACACTCTCCCGCCCGCTCCCCGGGGCCCCTCGCCGCCCGCCCATGGCCCAGAAGCCGAAGGTAGACCCCCACGTCGGTCGGCTGGGGTACCTGCAGGCGCTGGTCACGGAATTCCAGCAGACGCAGAGCCAAGGCGGCCTCTGCAACCTGTGCGCCGACAGGGCCAACAGGGAACACATCCTGCAGGCGGGGGGCGTCCCCCTCATCGTCAACTGCCTGTCCAGCCCCAGCGAGGAGACCGTGCTGTCCGCCGTGACCGCGCTCATGGGCCTGGGCTCGCCTGGCGCGCGCCCCCACCCCGAGCTGACAGCCCGGCCCGTGGTCCAGTGCATGCTGCGCTTCTCCCTGTCAGCCAGCGCCCGGCTCCGAAACCTGGCCCAGATCTTCCTGGAAGACTTCTGCTCCCCCAGCCAGGTGGCCGAGGCCCGCAGCTGGCGAGCGGATGCCGCCCTGGGGATCCCCCTGCCGAGGACGGAGGGCCCCCAGCAGCCCTGACCCGCTGCCCGCTGGACAAGGCTGAAACCCTGGTAGGGGCTCAGGGAGAGGCGGCGCCCTCTCCGCTAACGGCGCGCGCTCGGCCCATTTCAAGGTGCGTTTTCTCGGCATGGCAGGTATTTGCACTGTGATGAAAGGCCCCAGACGAGTGAGGAAGCCAGGTCTTGAGACGCGTGGACGGGGAAGTTGAAGATGCTGCCATTTTCACGGGCCACTGCTCTCAACCTCGTTGAGAGGCCCTAGTGCTGGCCCACCCCCCACCCCCGCCGGGTCTCACCCTCGCGGAGGAAGCAGCGTGGTCCCTGGACTCGGAGGCTTCGCAGAAGGTGTTTCTCTTGAGGAACAGCTGGGCTTGGAGCTTAGGACAGTTGTCTGAGCTTGAGGAAGGAAGCATTCTCCCCTAACAGAGGTGTCTGGAGTCATTTTGAGACGCAGAAATGAGAAGCCTTGCTGTTCAAAGTATATTGCGGCTCCGGGAAGCTGAGGGCGGTGTTGTGCCCCCGTCTGTGGAGGCTGGGTACCTGCCCCACAAGCTCTCCAAGCCGGGCGTTTGGCCTGGCGGATGCTGGCCCTGAGAACTCTCTGGCTTAAATGTTGATCTGTACAGACCTGTCAGCCAGACACCACGGTAGGGCGCCTCAAAGACCAGAGCGTGCCCCATGCTGTTGAGAGTCCAGCCCAGTGACTGTTACCGTGTCCGTGAGGGTGATGACATGTCAGAAGACAGGCGCAGACTCTTCGAGCGGTGTCTCCTCCCCTCCCCACCCGGCAGTCCCTGCTTGGAAGCCCTGGCCCACCTTCTCTGCCATCAGGGTTAGTGAGGGGGGTGCTATGCCTGGAAGCACGTCTGGGGCTCAGGCGGGCCTAGGGGATGCAAGAGGGCTGCTGAAGGGAGAGGGGACCAGCTGCTGACATACAGTGCAGGGCTCAGAGTCCAGTGTACACCGCTCAGCATGGGGGAAGGGGTGTGGGTCCCTGTGGAAAGCTGGGGTTCGGGAGCAGGGGAAGGTCCTGGCCCCCCTTAAGGTTGACCTCTTACATGACCAAGGAATGGCGGCTCCGAGAGGAACGGTGTCCAGGTGGACGTGGAGGTGGGCGGATTATGGGATTTATGGACTAGAGCCCAGAGGGAGGGAGGTGAAGGCCTCCTCATCGGCCTGTATTCCCGCCCCCCGCCCCCCGGAGAGTCCCGACTCTTCCCTTTCCCAAATAAAAGGCCTTAAGAGAGCAGCGAGCCAAAGCGTTTTATTTAAAAGGTGTGTGTTCTCCCAGC EMBV3_00397 ACCAGTTGTTCCTGCTCTGCTTCTCCGCAGGGATTTCCCAGATGACCCAGACGTGCGCTG Variant GeneID:507080|PIGL:NM_001100311:475_cdna 249^348 2 EMBV3_30534 GeneID:507080 19 GENE PIGL NULL phosphatidylinositol glycan anchor biosynthesis, class L EMBV3_06096 TCTTATAACAGATATCACCCCATGGGGGAGATCAGCCAACCATCCAGTAACCCCAAGAAG Variant GeneID:508767|CPOX:NM_001075372:23_cdna 222^323 1 EMBV3_16155 GeneID:508767 2 GENE CPOX CPOX MGC151904 coproporphyrinogen oxidase EMBV3_16945 AGGGTTCCCCTCTTTATTATGCACCAGAAATTGTCCCTGATTGCGGAAGACCCCTTGGGA Gene BVV0102_047916 + 1 EMBV3_43542 GK000006.2:109736357-109784687 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12542 TGAGCCCTGAGTTCGCTCTACTGTGACATTTCTGTCCCTTGGATGTAACAGGGGTAGTGT Gene GeneID:510284|LDHD:NM_001075443:91_cdna Constitutive 0 NULL GeneID:510284 18 GENE LDHD MGC139689 lactate dehydrogenase D EMBV3_07163 CCACTGCCTTCGAAAGAAACGATTGAACAGGAGAAGCAAGCAGGCGAGTCGTAATGAAGC Gene GeneID:785455|LOC785455:XM_002691436:116_cdna Constitutive 0 NULL GeneID:785455 11 GENE LOC785455 NULL similar to thymosin, beta 4 EMBV3_42335 GGGGTTGGACATGACTGAGCGACTGAACTGAACCAAAAGATGTGGTGGTATGACTGAGTT Gene BVT0102_071857 + 0 NULL GK000015.2:67911153-68697670 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059946 TCONS_00059950 1 XLOC_036542 Coding TCONS_00059946 XLOC_036542 NonCoding Coding - 15:68257784-68405269 - TSS44888 1412 1 TCONS_00059946_1 79 0.351274787535411 2 0.9904396409102 0.000805132547119401 7.01326047665376e-05 0.000180846455705364 0.000360745794949802 0.000313316042244288 3.53551813771584e-05 9.07757795244814e-24 0.00020798339969297 1.26774944753126e-93 3.06091491190006e-147 7.38306788100155e-24 0 1.80694030954242e-95 8.87360172089315e-56 0 0 0 1.7731500293236e-05 0.00031100122693816 0.000231866971530262 5.8031185787024e-05 0 6.4816589477505e-06 0.000676731741171715 4.83034874754088e-08 0.000385582272994486 0.000364256151207589 2.08017624496053e-32 7.41210960018799e-84 0 XM_592211.6 EGFR PREDICTED: Bos taurus epidermal growth factor receptor (EGFR), 1e-171 607 93.94 0.279745042492918 0 noncoding 0 0 0 0 -1.26175012604223 0.028104992484442 -0.092663053532838 0.20308883804333 TCAGGAGACCAGCTTGAGGTCTGTGCCTGCGTTTTACTCTTTTTCACAGGCACTTCAGCTCTGCAGCTCCTGCAGAAAAAGGCAGTTTTTTTTTTTTTTTTTTTTTTTTTTGGTCCTCCATTTTAAGTATTTTGGGGTTTTTGAATTTAAGGATAGAGAATTGTTTTTTGAAGCCACAGAAGTTATAGTGAGTGGCAGTTCCCACCTCGACAACTGCGGTGGTTCCTGGGAATGGCTGGCTTCTGCTGTGTCTGGATCCCTAACTTCAGACTCATAGCAAAACCTTTTGAATGAAGCTTTTAAAGGAAGAGATTATGACCCCTCTAGACTGAAATCTTGGAGGACAAACATCCAGAAGACTGGTTTTGTCTTTGCTGGACTGGGCCTTATGAGATATAGATGGGAAACGGAAGCCATGCTGCACAAAAACCGGGAACAAGGTTGCCCAAACTTGCACGGTTCCAGACCCTGATGCTGACTTCTCCTGGGGGCAGGTGAACCAAAACAGATCTCAAGTTGCTTCTCAGAAACCGCAAGAAATAAGAGTTTTAATAGAAGGAAATTAGAATAACTTGAAGAAAGCTGAGCACCGAAGAGTTGATGCTTTTGAACTGTGGGGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGACCTAACCAGTCCATTCTAAAGGAGATCAGTCCTGGGTATTCTTTGGAAGGAATGATGCTAAAGCTGAAATTCCGGTACTTTGGCCACCTCATGCAAAGAATTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAAAAGGGGACAACAGAGGACGAGATGGCTGGATGGCATCACTGACTCGAGGGACATGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCATGCTGCGATTCATGGGGTTGAAAAGAGTTGGACATGACTGAGCGACTGAACTGAACCAAAAGATGTGGTGGTATGACTGAGTTAAACACAGAAGGCTGGAAAGTAGAATAATGTCACTTACTACTATCGTTTGAGTTCTCCTATTCTTCCCACATTTTATCTGGTTTTTTTAGATATCATAATTTAGAGGTTCACAATTCATAATTACTTAAATATATGAAGTGTACTTGCCATTCTTTGAAAAGGTTAGTGCTATCACAGGATGTGTAAATCTTCTTTTATGAAAACGATGACAAGCAAAATTATGATTCAAGTCAAGGTTTTATAAAGCATGGACTTGGATGTGCTTGCTTTTAAAGTAATTTTAGTTTAATCCCTCATTTGAGACTCAGTCCTTATTTATGTATGATGATCAAGCTGATCATATGCTTGAGTCATTGATGAATGGACCAATGGAAATAAGGTCAAATATAGAATTTTCTTCCCTTTAGAATTACTG TCONS_00059929 TCONS_00059931 TCONS_00059933 TCONS_00059935 TCONS_00059936 TCONS_00059937 TCONS_00059938 TCONS_00059939 TCONS_00059940 s 3' 346626 TCONS_00059929 TCONS_00059931 TCONS_00059933 TCONS_00059935 TCONS_00059936 TCONS_00059937 TCONS_00059938 TCONS_00059939 TCONS_00059940 s 3' 346626 EMBV3_18281 CACCACGAGCAGGCCGGCTGGGCACCGGGCCCCGAGGACTCAGTTTCTCGTGTTATTAAA Gene GeneID:511899|INSIG1:NM_001077909:640_cdna Constitutive 2 NULL GeneID:511899 4 GENE INSIG1 MGC142724 insulin induced gene 1 EMBV3_26645 TTCGCTGACCGTTCCAACCTGCGGGCCCACCTACAGACACACTCGGACACAAAGAAGTAT Gene GeneID:526694|SNAI3:XM_002694858:809_cdna Constitutive 0 NULL GeneID:526694 18 GENE SNAI3 NULL snail homolog 3 (Drosophila) EMBV3_20784 AGCTTTATGACTCGCTGCTCGCCCTGGAAGGCCTCTGCACTTTGACGGCCGTCTCATGGT Variant GeneID:513034|CLDN19:NM_001101084:146_cdna 407^571 3 EMBV3_10569 GeneID:513034 3 GENE CLDN19 NULL claudin 19 EMBV3_08293 ATGGGACAGAAAGGAAAAGTGAGAGACCCACAGAAGACTAAGATGCTGGAGTTGGCGGAC Gene BVV0102_082454 + 1 EMBV3_02143 GK000025.2:2975116-2988662 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10439 CCACATCCCTCAAGAGGACTGCGCAAAACCAGCAGACCTGGATAAAAAGAACCCAGAAAG Gene GeneID:539369|NRP1:XM_002692084:266_cdna UTR3_Alt 2 NULL GeneID:539369 13 GENE NRP1 NULL neuropilin 1 EMBV3_10204 CCCTTTCCTGTTCTGCACTCTCTCCAAGGCAAAAGGAGGACTAACTGCCAGTATTAAAGC Gene GeneID:100138748|THOC1:XM_002697732:211_cdna UTR3_Alt 3 NULL GeneID:100138748 24 GENE THOC1 NULL THO complex 1 EMBV3_40887 GAGTAATTGTCTCTTTTCTTCTTTGTAATGGAGCAGTGAATGAGCGTGGGCTGGCCGGCG Gene GeneID:100196902|LOC100196902:NM_001143749:5_cdna Constitutive 0 NULL GeneID:100196902 19 GENE LOC100196902 NULL hypothetical LOC100196902 EMBV3_42549 CCTGAAGGGGGCCCGAGGGAACCTGACCAAGAACCAGGAAATCAAGTCCAAGACCTACCA Gene GeneID:616088|MUSTN1:NM_001040589:301_cdna Constitutive 0 NULL GeneID:616088 22 GENE MUSTN1 MGC133612 musculoskeletal, embryonic nuclear protein 1 EMBV3_38160 TCTATTATTACACAATCACCCCCAGCTATGCAGAGTCCAGATCTGAATGACGCTGTATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09647 CCTAAGAAGTTTACCTGCCAGCTGCTCGTTGTCTCTGGCCACTGTGCCACCAGAGGACTT Gene BVV0102_191902 + 0 NULL GK000004.2:77797333-77802983 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184629 TCONS_00184628 TCONS_00184630 1 XLOC_111391 Coding TCONS_00184628 XLOC_111391 Coding Coding YKT6 4:77801078-77810835 j TSS137440 2931 2 TCONS_00184628_3 159 0.0733538041624019 7 0.700287002870029 0.00182692835228105 0.000673150353636116 0.00145078171513973 0.000804241237377954 0.0018538483688982 0.000545144578179576 0.00138052730829448 0.000532013016106334 0.000540821041345157 0.00282098391173903 0.000638870373735438 1.02343755257229e-20 0.000554937274523866 0.00189306049218485 0.000492880499849694 0.00829310265636122 0.00143308366872612 0.0115504378798573 0.00227457535246174 0.00125124230071195 0.00057786478351204 0.00243388914420878 0.00313814687220246 0.00591522757202064 0.00179721142357534 0.00244893887951398 0.0013090671408557 0.000204817470651509 0.00110913697414557 0.00124165362043604 NM_001035047.1 YKT6 Bos taurus YKT6 v-SNARE homolog (S. cerevisiae) (YKT6), mRNA. 0.0 1741 99.29 0.332309791879904 NM_006555.3 YKT6 Homo sapiens YKT6 v-SNARE homolog (S. cerevisiae) (YKT6), mRNA. 0.0 958 80.52 0.349027635619243 TCONS_00184628_3 sp|Q3T000|YKT6_BOVIN YKT6_BOVIN Synaptobrevin homolog YKT6; 2e-116 332 100.00 0.993710691823899 2 coding 0 0 0 0 -0.0633374183886043 0.620206950314374 0.0264769063750986 0.647080545671631 CCTCGGGCGGCAGCCCCTGACCGGAACCGGAAGTGGACCCCGAGCCAGGAGAAGGAAGCCGGTGGCCGACCCGTCAGCAGCCGGCGGCGGCCTCGAGGGGCGGCGCTGCGCTGCTCCCTGCGAACCGGTGCCGCGGCCAGGCGGGTGGCCGGCCCAAGGGCCCGGCGCCATGAAGCTGTACAGCCTAAGCGTCCTGTATAAAGGCGAGTCCAAGACGGTGCTGCTCAAGGCCGCATACGATGTGTCCTCCTTCAGCTTTTTTCAGAGATCCAGGAGTTCATGACCTTCACAAGTCAGCTGATTGTGGAGCGCTCAGCGAAAGGCAGCCGAGCTTCTGTGAAGGAACAAGAATATCTGTGCCATGTCTACGTGAGAAATGACAGTCTTGCAGGAGTGGTCATTGCTGACAGTGAATACCCATCCCGGGTGGCTTTTACCTTGCTAGAGAAGGTGCTAGACGAATTCTCCAAGCAGGTCGACAGGATAGACTGGCCAACTGGATCCCCTGATACCATCAGGTACTCAGGCCTGGACAGTCAACTCAGTAGATACCAGAACCCCCGAGAAGCTGACCCCATGACTAAAGTGCAGGCTGAACTGGATGAGACCAAGATCATCCTGCACAACACCATGGAGTCTTTATTAGAACGAGGTGAGAAGCTCGATGACCTGGTATCGAAATCCGAAGTGCTGGGAATACAGTCTAAAGCCTTCTATAAAACGGCCCGGAAACAAAATTCGTGCTGTGCAATCATGTGACGGCTGCCAGCAGAGGCCCCTGCGCTGGAACGTCACCATCATTCACATCAGAACCACGGCCCCCCAGGAAGCAGAGCCACCTTGTAACAACCCAAGTGGGACAGACTCAACTTTGGCTTTGGAGCTCCTGGGAGAAACCGAAGGGTGGATGGGGACCTGGGGGTGGGGAACGTTCAAATTCACATGTCTAGTTATTTTTGAAAAGATACTGAGGCCCCTAAATGTGTATTTGGGGGCCAAATGGAACCATAAAACTCAGTGACTCCATAGATGCTACAGGGTTCATTTCTAATCCCCTGGGAAGGATGTGGGCCCCCAACTTGTGCAAGGCCCATGGGGGGTTCAGAGCCAGCTCTTTGTGGATCTTCACATGTTTGGGTTTTGTCTGTATACTAATTATTAACACTACAAGGAGCAGGGTGCCCTGACTCCAGGACTGGGGAGGGACAGCCACTGTGGGGCTGCAGTGGGCATGGGGGCGGGGTGGGGGGCTCAGGCCAGTGCTTCTGTGTTAGGAGGAGACAGCTACTGGACTTCATAAATTCTGAGACCTGGTTTGCATTCCTGCTGAGATTGACTTTGACTTTCTGCGGTACCCATCCAGCAAGCAAGTTCCGTAAAGAACGCTAGAAGTAGGGGAGGGGGCGCTTGCCCTGACTTGCAGTTTGGCTTTGAACATCTGGATCAGAGCACGTATGCTGCAGTCTCGTGAATAGTTGTCATTTGCCTCTCTGGTGACAAGAAAGACTGTTCTGACAATCACCTGGGACTTATGTCTTAGCAAGTGACCTTCACTGTGGCCACCATTTCTAGGCACCAAGAGAAGATGCCAGCCAGCCTGGGGGCTCCCAACATCCACTTGTGGTCTGAGCTGTCCACACTCCAGCCCAGCCCCCAGCAGAAGCACTGCTGAGCACCCCGGCCCTGCCCCCAGCAGCATGAGGCCTATGGCTCTGAGGCCCTGCCCTAAAAGCAGGTGCAGGGAGCAAGCCAGGCAGTAGCCCAGGAGGTTCCAGCTCTTCTCAGCCTTGCTGGTCCTGTGGGCCCTGCTGCCGTGTTGTAAACCGCCTCCTAGTGCCCTGCTGCGCTTGCTAAGGACACAGGCTCAGGACACACCCTTGAGAACCAGTCTCCGTGGACGCCCCTGTTGGAGCGGTATCAGTGTGGTCTCATCCTCCGGTGTCCTTCCCTGAGCCCTCTGTTCTTGCCCTGCCGAGGAGGTCCACTGCCCTGACAGGAAGTGCCTGTGGCCTTGAATTCCCTGGCATGGGCCAGAAGTGGGATCTGCGTGGCCTCTGAGGACCCACCCTAAGAAGTTTACCTGCCAGCTGCTCGTTGTCTCTGGCCACTGTGCCACCAGAGGACTTGGCCTAAAAGTAGCCTACCCATGTAAGTTCTGCCATGTTTACCCCTGAAAGGCGCAGACCTGGCCTGCTCACTGGTCTCTGATGTGGCCATGACCACCCCTTAGGGATGATTGAGAGGTGTCTGACTCCTCCCACTTTGGAGGGTACTGGGGGTGGGGGGTGGGGGGTGGCCAAGATTGGGAAGAGGGTGACAAGGGTGAGTAGGGCTGGCCAAGCCCTCTGCATCCACCCTTCCTCCAGCTCCTCTTGTCTTCTCATGTTAAATCATTTGGCAAAGTGTATTTTAATAACTGCTGCCTAACTTTTCTCTGTGTTCTGTTTGGAAGGTTCCTATGTGGATAAAGTTGTCTTTTGAAATTCCAAAATAGTCCTGTGCTTTGTTTTGGGCTTCCCAGGTGGCACTAGTGGTAAAGAATCCACCTGCCAATCCAGGAAACATAAGAGACGGGTTTGATCCCTGAGTCAGGAAAATCCCCTTGGAGTAGGAAATGGCAACCCATTCCAGTATTGTTGCCTGGAGAATCCCATGGACATAGGAGCCTGGTGGCTTACAGTCCATAATCACAAAAGAGTTGGACATGACAAGCAGCTAAGCACACAATGTGCTTTGAGCCACAGGGACCCCTTTCCACGGGAGCCCTGCCCCTCATGCTGTGCCCCTGCCGAGTGTGGGGTTTGCCATATCTTGTGGGGGAAGCAGCCTCTACCTTAATGCCCCCATTCTCCTCTCCCCACCCCCTAGACCTTTCTAGCAGGAAGTGGGGGAGGGAGCCCCAGAGTAGAGAGAAGTCCTGCTCTGAGTCCT EMBV3_26891 GGCCGCCCTGGCTGGTCGTCTGATGATAAGGAAATTAGTTGCAGAGAAATTGAATATACC Gene GeneID:519816|AASDHPPT:XM_002692918:32_cdna UTR3_Alt 2 NULL GeneID:519816 15 GENE AASDHPPT NULL aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase EMBV3_02722 AAAAGCTACCGTCTGCATCATAAGTAGACTCGGTGGGGAGAGGGTCTTTATTTCTGTAGC Gene GeneID:518728|MAGEF1:NM_001102049:81_cdna Constitutive 0 NULL GeneID:518728 1 GENE MAGEF1 NULL melanoma antigen family F, 1 EMBV3_37906 GGGCCCTTCACCACCGGGTGCTCCCTGTCTGCTCCCTGGGCTCCCAGGGCCAGGGTTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00058 TGTGACCCTATGCCTGCTCATTTGTACCTCTACTGCTTCTCTCCACCAAGAGAGGTGGGT Gene GeneID:789206|LOC789206:XM_002687101:383_cdna Constitutive 0 NULL GeneID:789206 4 GENE LOC789206 NULL similar to TCRVB21 EMBV3_28862 TGCTCCTTGTGTGTATTAAGTTGCTTCAGTTGTGTCCAACTCTCCGACCCTATGGACTGC Gene BVT0102_183891 + 1 EMBV3_08796 GK000022.2:21498564-21614842 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130348 1 XLOC_079057 NonCoding TCONS_00130348 XLOC_079057 NonCoding NonCoding - 22:21520250-21520480 - TSS97215 230 0.747826086956522 1 0 0 0 8.04695410880491e-05 0 2.14659562868146e-05 1.55524262781678e-05 2.53552275936206e-05 0 0 0 0 0 0 0 0 0 0 0 0.000218244872426985 0 2.6397646014893e-05 0 0 0 0.000391609862113043 9.18973419959074e-05 0.000254745976897101 0 0 0 XM_005218130.1 SLC5A1 PREDICTED: Bos taurus solute carrier family 5 (sodium/glucose cotransporter), member 1 (SLC5A1), transcript variant X1, mRNA. 2e-14 82.4 96.00 0.21304347826087 0 noncoding GAGCCTGGCGGGCTGCAGTCCATAGGGTCGCAGAGTTGGACACAACTGAAGCAACTTAATACACACAAGGAGCATTTACAAGCATACTTCTTTATAACCTCGAAAGGTTGTACTAACCCTCCTAAGCTTCATTTCTTCATCTGTCAAATAAGGGTAATAGTACTAATTTCAAGGGGTTCTTGAGAGAATTAAATGAGAATTACAAAAAAACAGCTCTTATGTTCCCTGAC TCONS_00126472 . 3' 21700 TCONS_00126472 . 3' 21929 EMBV3_36162 TACCACGTCCACGAGTGTGTAATTACAGCACCAAGTCGAAGAGGGAAGACGGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_32089 GTTGCAGCAGAATGTTCATAATGGGGTCAACCAAGCCGGCAAGGAGGCCAACCAGCTGCT Gene GeneID:540452|SBSN:NM_001104997:721_cdna Constitutive 0 NULL GeneID:540452 18 GENE SBSN MGC159983 suprabasin EMBV3_10914 GTTATGGCTGGAGGTCTCTTTGCCGTGGATCGCAAATGGTTTTGGGAGTTGGGTGGCTAT Gene GeneID:615819|GALNTL6:XM_002689451:1_cdna Constitutive 0 NULL GeneID:615819 8 GENE GALNTL6 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6 EMBV3_22152 GAAAAAGGGGCCAGCGGAGAGGAGGCCTTACAGGGAGGAAGAGGAAGAAGAGGCTTACTA Gene GeneID:508651|LSR:NM_001083394:571_cdna Constitutive 0 NULL GeneID:508651 18 GENE LSR MGC151771 lipolysis stimulated lipoprotein receptor EMBV3_38568 CCAGGTAGCTTTGCTCATTACAAGTCTCACCACTGCATCACCAAGAACTCATTATGCTGG Gene BVV0102_079038 + 1 EMBV3_43277 GK000030.2:63056848-63076961 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41538 GAGATACCTTTTATCTCTAAACACTTCAGTGTGTTTCTGAAGAAGAAAGACGTTCTTTTG Gene GeneID:539564|PGBD1:NM_001076174:31_cdna Constitutive 0 NULL GeneID:539564 23 GENE PGBD1 NULL piggyBac transposable element derived 1 EMBV3_16955 GAGTCCGGCGCACGTCGGCGGACTGTGGTGACATCCGGGAGACGGCCTTCGTGTTCGCTA Variant GeneID:505075|WNT6:XM_002685575:162_cdna 186^406 1 EMBV3_16972 GeneID:505075 2 GENE WNT6 NULL wingless-type MMTV integration site family, member 6 EMBV3_35235 CGGTGTGGACACTGCAGCGGTAGCAGACGTGTACGACATTTCCAACATAGATCGAATTGG Gene GeneID:538944|CKMT2:NM_001034656:5_cdna Constitutive 0 NULL GeneID:538944 7 GENE CKMT2 MGC128593 creatine kinase, mitochondrial 2 (sarcomeric) EMBV3_38939 AAACATGTCTATTTGAATCGGAAGGTTTGGGTATGGTGTGGAGCCTCCTGGTTTGATAAA Variant GeneID:614840|GAS2:NM_001105001:16_cdna 639^702 1 EMBV3_34402 GeneID:614840 29 GENE GAS2 GAS-2 MGC179442 growth arrest-specific 2 EMBV3_26223 TTCCCATTTGCTCAGCCGTGTGTTCTCACACTCTCCTTTACCTTGAGAGCTGACTGTTGG Gene BVT0102_203177 + 0 NULL GK000029.2:7294861-7416801 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164466 TCONS_00164465 1 XLOC_100233 NonCoding TCONS_00164465 XLOC_100233 NonCoding NonCoding - 29:7343266-7345812 - TSS123054 1262 1 TCONS_00164465_2 77 0.354199683042789 2 0.504911591355599 0.000281503664529542 0.000597170591345142 0.000527957823395258 0.000197401408859965 3.90679409632692e-06 0 0.000337332580182528 0.000691298023429356 0.000162546493963699 0 0 0 4.54449263610036e-06 0 0 0 0 0 0.000495767593656172 0.000113960844754254 0.000946561816792896 0 0 0 0.00016743992825978 6.1402619304214e-05 0.0001164201361896 0 3.84146361874652e-06 0.000323949127477381 XM_003581785.2 RIPPLY3 PREDICTED: Bos taurus ripply transcriptional repressor 3 (RIPPLY3), 1e-147 527 86.15 0.358161648177496 0 noncoding 0 0 0 0 -0.0783290753557615 0.687592391033335 -0.0422752956731882 0.481587986495374 CCTTTTCTTCCACCTTCCAGCATAATTTGAAGAAGCTTATCAACCTTATCAAGTCAAAGCTATGGTTTTTCCAGTAGTCATGTACAGATGTCAGAACTGGACCATAAAGAAGGCTGAGTGCTAAAGAAGGCTGATGCTTTTGAACTGTGTTGTTAGAAAAGACTCTTGAGAGTCCCTTGGACAGCAAGGAGATCAAACCAGTGCATCCTTAAGGAAATCAACCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAGTTCCAGCACTTTGGCCACCTCATGCGAAGAGCTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGGGAGAAGAGGGTGACAGAGGATGAGATGGTTGGATGGGACCATCGACTCAATGGATATGAGTTTGAGGAAACTCTAGGAGATAGTGAAGGACAGGGAAGCCTGGCGTGCAGGAATCCATGGGGTCACCAAGAATTGGACATGACTGAGCAACTGAACAACAAAAAAAATCAAAGGAACCCCACATTGGGAGAACTTCTGGTTGCACACAACTCTGAGCCTCTCCTGATAAATAGCCCAGCAGGTGTCTCACCGCTTTGAGTTACGTGTGGTTTGCCCATCTGCGCAGCGTGAGTGACCCAGACAGCAGAAGGACGGGCCTTGTTTCTCAGTGTACGGTCTTGGCAATTTCTTGGCCCTTGTCCAAGTCACCAGACACACTCTCCATCATTACCATTAACAGCAACGTGTTACAATGCAGCCATTACCACTCATCTACGCCAGCGCCTGAGTTGATGAGTTGAGAGGAGAGGAGGACAGAAAGGGGAAATCTAAAGGCAAGGTGCGGTGGGGGCGGGAGACAGCTTCTCCTTTTCTGCCCTTTCTCCAAAAACTTCCCTAGTTTTATTTCCCATTTGCTCAGCCGTGTGTTCTCACACTCTCCTTTACCTTGAGAGCTGACTGTTGGACGCGCACAAGAGAAGAACATGAAGGCCTCCAGATAAAGTAGACACGGAATCAACACAGGGTTCCAGTCACTCGTTTTCTTTGACGGGGCTTTACCAGGCTGGATGGAAGAAGAAAAGACAGCCAGGAAAGCGGGAGTTATAAATCAGCTCTGTGCTCTTCCGAGGATTTATATTCAACTGAAGACGTGTCCAATGCAGGACCTTATGGCTTTCTGTTTTCTTTTTGCTTACATGGAGAAATAACAGTTAATATAGTCAACTATCCCAAGGCAGAAGAGTATTATTAAAAAAAGAAT TCONS_00162989 r 5' 72787 TCONS_00162989 r 5' 70990 EMBV3_03702 AGGCGGTTATGGTAGCGGCGGTGGGAGCTACGGAGGGAGTAGCAAAAGTAGCAGCAAGTA Gene GeneID:100336698|LOC100336698:XM_002687245:75_cdna Constitutive 0 NULL GeneID:100336698 5 GENE LOC100336698 NULL Keratin 77-like EMBV3_42463 GCTTCCAGAGAACAGCCCATCTAAAGGCTTCCAACTCACTCGACAGGAAATAGTTGCTCT Gene GeneID:514361|ERO1LB:XM_002698797:175_cdna Constitutive 0 NULL GeneID:514361 28 GENE ERO1LB NULL ERO1-like beta (S. cerevisiae) EMBV3_28170 TTCTCATGCCGCACCTACATCCTCACTGCCATCTTCCACCTCCTTACCTGCTCCATCTGA Gene GeneID:613777|PTMS:NM_001104999:73_cdna Constitutive 1 NULL GeneID:613777 5 GENE PTMS NULL parathymosin EMBV3_20001 CCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCCGAGAGGGATTGTCA Gene BVT0102_431331 + 0 NULL GK000020.2:55885295-55966891 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179596 TCONS_00048298 TCONS_00013240 TCONS_00243948 TCONS_00098385 TCONS_00098275 TCONS_00031871 TCONS_00099834 TCONS_00252294 TCONS_00154811 TCONS_00169479 TCONS_00140493 TCONS_00162451 TCONS_00174545 TCONS_00199297 TCONS_00025106 TCONS_00025108 TCONS_00230483 TCONS_00252175 TCONS_00174542 TCONS_00172905 TCONS_00202431 TCONS_00174541 TCONS_00056222 TCONS_00187484 TCONS_00132257 TCONS_00252842 TCONS_00013239 TCONS_00174540 TCONS_00169645 TCONS_00174543 TCONS_00039773 TCONS_00221594 TCONS_00161883 TCONS_00174544 TCONS_00238548 TCONS_00140494 TCONS_00160925 TCONS_00162450 TCONS_00169477 TCONS_00171161 TCONS_00013237 TCONS_00088693 TCONS_00137852 TCONS_00187773 TCONS_00178137 TCONS_00226267 TCONS_00029929 TCONS_00243949 TCONS_00000314 TCONS_00222044 TCONS_00135546 TCONS_00169478 TCONS_00154809 TCONS_00226268 TCONS_00164253 TCONS_00094939 TCONS_00115444 TCONS_00107398 TCONS_00042246 TCONS_00154810 TCONS_00171162 TCONS_00117782 TCONS_00013238 TCONS_00174546 TCONS_00031828 TCONS_00202430 TCONS_00154812 47 XLOC_109368 XLOC_028430 XLOC_008038 XLOC_150314 XLOC_058631 XLOC_058521 XLOC_018116 XLOC_060077 XLOC_155235 XLOC_094549 XLOC_103372 XLOC_085141 XLOC_099332 XLOC_104638 XLOC_120950 XLOC_014669 XLOC_139973 XLOC_155116 XLOC_104243 XLOC_123974 XLOC_034025 XLOC_113529 XLOC_080738 XLOC_155783 XLOC_103408 XLOC_023590 XLOC_134908 XLOC_098768 XLOC_145215 XLOC_097818 XLOC_103753 XLOC_053479 XLOC_084061 XLOC_113817 XLOC_107910 XLOC_137960 XLOC_016184 XLOC_000088 XLOC_135353 XLOC_081769 XLOC_100173 XLOC_057600 XLOC_069614 XLOC_063308 XLOC_025624 XLOC_071948 XLOC_018073 Coding TCONS_00179596 XLOC_109368 Coding Coding - 3:99968921-99976242 - TSS134355 7321 2 TCONS_00179596_16 405 0.995082638983745 1 0 2.2899730733807e-05 2.87794733106343e-05 1.46660483268652e-06 6.61670287463767e-07 1.53646147036544e-06 6.28636240086872e-07 5.72528955562941e-06 1.21959670911563e-05 5.74881503638329e-06 0.000780002652451121 0.000524875399509416 0.000765542978596544 0.000139250951259028 0.000374871407518322 4.26007064693583e-05 0.00240846066750101 0.00195592431671475 0.00489058798563395 1.09503770484616e-05 4.87551939026511e-06 1.22570456212253e-06 0.0026724491859505 0.0033515583835469 0.00270820785064512 1.27136386568317e-06 4.52394845141639e-06 5.25248538403041e-06 0.00182989328022288 0.0018967866127545 0.0033944148952754 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2479 90.46 0.246414424258981 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 6e-08 66.2 69.48 0.0208987843190821 TCONS_00179596_12 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 2e-25 110 28.41 0.723287671232877 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACACATAAAAGGAAGAGCCAAAGCGCTCTCATGGACTCTCTCTCCTGCGTTCATGCGCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCTTAAGAGCTGTAGCATGGTTCCAAGACCCAAGAGCTGTGATGCGCTGAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACATACACTCGTGTGACATCTATGGTGCCGTGACTCGGGTTTAACCTGGCTGAAACAACCTTTGCGCAGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGCAAAACTCCCGCACTAGAAGTGGAAAGCGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACTGGGACAGTGAAAATAGAACTCAGCAGAAAGCTCACGTGGCCCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGTAAGAGGTCCTTGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCATTTCTTGTTTCCTCAAACCTCCCACAAACAGGCAGGCAGCAGGGGAACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGGTGGGGGTTCTTCTGTCCTTTATCCTGTGCCAAGGATCAGACCAATAAAATTATGAGGACCGGTCAGATATTTAGCAAATCTTCCAGTGGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCTGGCTAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAAATTTGTTAGGATCCAGAGAGAAGCCACCCTTCAGGGTGTGAACTGTTGGCAAGGTCAAGGGCTGGGGCCATGGAATTAGGCCGGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATAAGTGAGAGGACCATCCCAGCCATTGGGGAACCACCCACTCATCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTAGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACACTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCTCTTCCCTCCTGTTTCATGCTCTTTTCCTGATCCCCATCCAGACCCACAAGCCTGCCTCTACAATCTTCTGGAGAGACAACCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGGATGCCCAAACTCCAGTCCGGGGGGGTCCCAGGAGGTCATCACACCTTGACCTGCCTAGAGATCAGTCTTCGAAAGGTTGTCACACCTTAACCTGTTGGGGATCCTCTAGTCCGAGGGGTCCCATGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGCCATCACGCCTCGACCTGCCCGGGGATTTGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTACACCCTGACCCAGGGACACCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAAAAGATTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAACCTATTACTCGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCATTGCCTTTCTGGAGAGGTTAAAAGAGGCACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGATAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGACAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAAAAAGAGACAAGGCATGCTCAGATGCTGGCCGCCCTCCAGAAAAGCCCTATGGCAAACCCAGAGTCCTTGAAGGACAAGGCACAAGACAAATGCCTAATCTATAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGCAGCACTCTGCCCTGGGGACCCAAGAGCCTCAAGGTCAAGAGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGTGGCCTGCTCCAGCCAGCCCGCCAGTCACAGATAACCATCACGGGGCTGGAGCCAAGAGTGCACCTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTCCAGGAAAAGCAACTACTAAAAGATTGACCTGAGCACTTCTTTGTTGCTGGGATGGACAAATTTTCCCATCAGTTTCTGGTGGTCCCTGAGTGTCCTACTCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAATCCATTACACCTTCAATAGAGAGGGGCCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGCCCACCAAGCTGAACCAGTCATCATTATCCTCCGAGACCCTACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGGCTCAGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGTTTGTGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGAAAACAGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCTATCCCACAGTACCCAATCCCTACGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACTACTGGCTAAAGAATCCCAATATCGTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACACCAACAGATGACTTGGACGGTATTACTTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGAAAGGCCCTTAGCCAGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGTACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCAAAAACAATTGCGAGCTTTCCTGGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGATGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGTCTGTAGCTTACTTATTCAAGAGGCTCGATCCAACTTCCCAAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATTGGAGAGGCCATTTATGGATGTCTGATCAAAGAATTCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCAGGTATGCAGTAGTCTCCAATTTTGAGACCACAGAGGCTAGGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAACTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATATCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCAACTCTTGGAGGCAGTCCATCTGCCCACTGAGATTTTCAGTCTCCCACTGCAAAAGACACCAAAAAGGGAGCAGGGAAGTGACACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTAAGAGACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATATCGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCTTCCAAATATTACTAGAAAGGTCCTTCAGAGGAACAGGCGTCCAAACAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACATGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGACATATACATTCACAGGATGGATTGAAGGCTTTCCCACCCAGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCTAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGTATCGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAAGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGCATTGCCTCTGAGGAACAGGTTGGTCTTAGTCCTTATGATATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACACTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAGCCCACATGGAAGGGCCCCTACCCTGTAATACCTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGACACCTATTCAGAACTACCAGTGAGTGCCTTCTAATGAACACCCCCAAAATCTGGTTTCTGGGTATAAAATTTCTCAGGATAACCCTAAAGAGCCAACACAGCTTGACAGATACTGTACTCCAAAACAGAGAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCCATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATACAAAACTACAACTGACCACGGAAAATATCACACACCCTTGGACACTGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAAGGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGAAAGTAGCCAGAAAGACCTCGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATTTCTTGAGGGGGGAATATTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCAAGGACCAGAGTGAAGACTTCAGGTAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATTAAAAGGAAGAGCCAAAGTGCTTTCTCATGGACTCTCTCTCCTGCGTGTGTGCGCTCTTCCTCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATACAGCTGTAACACTGATTTACTTAAGAGCTGTAGCATGGTTTGTCCAAGACCCAAGAGCTGTGACGTGCCAAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGTAGGAAAGTAGGATACATGTTTTGAGTAAAAAAGGATTTTTATGCATGGCTGGGCTGAGATTAGGTTAAACTTATTCAGGTAAATGGATTTTGTTATTAAAAGTAGACTGGTGCAGGACTAGATTTGGTTCCTCTATTCTAAGAGAACATGTTTACTTAGAATGCTGCTTTTGATAAGATTGTATGAACTTGCCTTTAAGTGATCTGTATTTGTTTTTAAATAGTCACAGTGACCTATGATTCTATCTGACCAAATATTTTTAAAACTTTTTGATATTTTTTATGCACTTCCTATCAAATTCTAATTAAAGTTCTTTTGACTTCAGCTAGCTTGGAGATGCTTCAGAGGGCCCTTCAGAAAAAAATTTAATATAATTTAAAACTACATATATTCATATTAAACTGGCTAGAATTGGTTGATATGTTAAATTACACAGAAGTCAGTGAATGATCAGCCTCCTCAGATTATATGTTATGAATAAATTTTATTAATACAGACATTCTAGAAACTA TCONS_00174208 . 5' 11514 TCONS_00174208 . 5' 11514 EMBV3_13754 AAGTGGCACAGCTGAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGTAACCGCCATGC Gene GeneID:509827|ATF2:XM_002685316:163_cdna UTR3_Alt 5 NULL GeneID:509827 2 GENE ATF2 CREB2 MGC142504 activating transcription factor 2 EMBV3_38075 TCGATGCGAGTTGCTTTGTCTTCTGTAGTCGCCAAGGTGGTTGAGAGTTTAAGCTTGCGG Gene BVV0102_433377 + 0 NULL GK000015.2:59200909-59499806 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062002 TCONS_00062005 1 XLOC_037191 Coding TCONS_00062002 XLOC_037191 Coding Coding BDNF 15:59161854-59224493 j TSS46063 4309 1 TCONS_00062002_2 258 2 0.931239822471982 0.000107543053292213 0.000482795469674279 0.000824813745979476 0.000322258520417456 6.83533919925262e-14 1.22206223809825e-08 0.000470725814685 4.44708511964067e-05 3.11215963775755e-33 8.47285003534236e-41 1.62282136811631e-15 2.57158403276195e-20 7.69386677440246e-25 1.18217872467019e-20 0.00016731869446327 1.50779292659646e-34 2.76692169005481e-146 0.000200215318451991 6.84092691518053e-22 0.000756610061391238 3.09923181560351e-18 9.0031012683217e-05 1.202738696455e-19 2.11792689133216e-21 7.49921478679878e-05 4.75124345974918e-08 0.000331363803016874 4.08571854117085e-62 6.13454674340215e-70 5.52242922505395e-57 XM_005216334.1 BDNF PREDICTED: Bos taurus brain-derived neurotrophic factor (BDNF), 0.0 3380 100.00 0.434671617544674 NM_170731.4 BDNF Homo sapiens brain-derived neurotrophic factor (BDNF), transcript 0.0 4720 84.48 0.999767927593409 TCONS_00062002_2 sp|Q95106|BDNF_BOVIN BDNF_BOVIN Brain-derived neurotrophic factor; 0.0 525 100.00 0.965116279069767 1 coding 0 0 0 0 -0.695925290341953 0.248176447951637 0.04826078641907 0.688881523110069 TCCCGCCCTAGCCTGTCTAGGCGAAGGTTTTCTTACCTGGCGACAGGAAAATCTCCCGAGCCGAGCTCAGCTATGCCAGAGCCCCAGGTGTGACCTGAGCAGTGGGCAAGGGAGCGGTGTGCAGGCTGGGTTATTTACATGAGGGTACCCTGAAACTCCCCACTTTCCCCGGGAACTTTCTGTGCCAGGACCCAGTGACCGGCGGTTGGAAGGCAGCCCTGGGAACCACCGCTATATAGCAGGGCACTTGGGCAGTCATTGGTAACCTCGCTCATTCATTAGAATCACGTAAGAACTCAAAAGGAAACGTGTCTCTCGGAGTGAGGGCGTTTGCGTAAATCTATAGGTTTTTCAACATCGATGCGAGTTGCTTTGTCTTCTGTAGTCGCCAAGGTGGTTGAGAGTTTAAGCTTGCGGATATTGCAAAGGGTTATTAGATTCATAAGTCACACCAAGTGGTGGGCGATCCACTGAGCAAAGCCGAACTTCTCACATGATGACTTCAAACAAGACACATTACCTTCCAGCATCTGTTGGGGAGACGGGATTTTAAGACACTTGAGTCTCCAGGACAGCAAAGGCACAATGTTCCACCAGGTGAGAAGAGTGATGACCATCCTTTTCCTTACTATGGTTATTTCATACTTCGGTTGCATGAAGGCTGCCCCCATGAAAGAAGCCAACCTCCGAGCCCAAGGCAGCTTGGCCTACCCAGGTGTGCGGACCCATGGGACTCTGGAGAGCATGAATGGGCCCAAGGTGGGTTCAAGAGGCCTGACGTCCTCGTCGTCGTTGGCTGACACTTTTGAACACGTGATCGAAGAGCTGTTGGACGAGGACCAGAAAGTTCGGCCCAGCGAGGAAAACAATAAAGACGCGGACATGTACACGTCCCGGGTGATGCTCAGCAGTCAAGTGCCTTTGGAGCCCCCTCTCCTCTTCCTGCTCGAGGAATACAAAAATTACCTGGATGCCGCAAACATGTCCATGAGGGTCCGGCGCCACTCGGACCCCGCCCGCCGCGGGGAGCTGAGCGTGTGTGACAGCATCAGCGAGTGGGTGACCGCAGCGGATAAAAAGACTGCAGTGGACATGTCGGGCGGGACGGTCACGGTCCTTGAAAAAGTCCCCGTCTCAAAAGGCCAGCTGAAGCAGTACTTCTACGAGACCAAGTGCAATCCCATGGGTTACACGAAGGAGGGCTGCAGGGGCATAGACAAGAGGCATTGGAACTCCCAGTGCCGAACTACCCAGTCGTACGTGCGGGCCCTCACCATGGATAGCAAAAAGCGTATTGGCTGGCGGTTCATACGGATAGACACTTCTTGTGTATGTACACTGACCATTAAGAGGGGAAGATAGTGGCTTTATGTTGTATAGATTATATTGAGACAAAAATGATCTATTTGTATATATACATAACAGGGTAAATTATTCAGTTAAGAAAAAAAATAATTTTATGAACTGCATGTATAAATGAAGTTTATACAGTACAGTGGTTCTACAATCTATTTATTGGACATTTCCATGACCAGAAGGGAAACAGTCATTTTTTGCGCACAACTTTAAAAAGTCTGCTTTACATTCCTCAATGTTGTGGTTTGTTGCCGTTGCCAAGAATTGAAAAACGTAAAAAAAAAAAAAAGTTTAAAAAATACTACTAATAAATTGCATGCTGCTTTAATTGTGAATTGATAACAAACTGTCCTCTTTCAGAAAACAGACAAAAAAAGAAAGAAAAAGTCTAACAAAAATTTGAACCAAAACATTCCGTTTACATTTTAGACAGTAAGTATCTTCGTTCTTGTTAGTACTCTATCTGTTTTACTGCTTTTAACTTCTGATAGCGTTGGAATTAAAACAATGTCAAGGTGCTGTTGTCATCGCTTTACTGGCTTAGGGGATGGGGGATGGGAGGGGTATATTTTTGTTTGTTTTGTGTTTTTTTTTTGTTTGTTTTGTTTTGTTTTTTAGTTCCCACAGGGTGTAGGGATGGGGAAAGAATTCCTTCCATCTATATTCTGGTTGATAAAAGATTCATTTGTCAAAGATTCATTTGCAGAGATGTTGGCAGTATCAATCAGATGACTGGAAAGTGAATAAAATTATGACAAACAAATGAAGTGCTCACTCCACTCCCCATGGCGCACCACTTAGGCGCCCACTCACCCTCTGGGCCTTGGTCGGTGGGTGGGGGTGGGGAGGGCATCTTCTTTGGTCAGAAAGATCTTCATTTACTCTGAGCACATTCTTTCCCCCCCACCCCCTCTGGTCCCCTCCTTGTTTTGTTTCCTCTTAAGGGAGAAAAACCAATCGCAAGCCCTGAAGTAGTTTACCACTGCTGCAAATGAGTAGACAGGTTTGTCACACCATGGCACTCAGAAGCCTAGAGAATAGTGATTTCTTTTCTTTTCTTTTCTTTCTTTCTTCTTCTTTTTGTTTAGAGGAGAGAAAAACAACAAAAAATAACTCGAAGATGAAGATTCTTTTAGATGAGGGGTAAACATTTGGGTCAATCATTATAAGGATTAAAAAAAAATCATGGTAAAGTTTAAAACTGCCTTGGAAGCCAAAGGAGAGTTCTATACAGACCCAGAAACACCTAGATAGAGCAGGAGTCCACACTGCCAGTGAAATGAGACTAAACAGCCATCTGGAGGCTGTGTGGAGCGGATGTATCCTGTCCAGGTCGTGCAGGAGAAATTTCTGAGTGGTCATGCTGAGGCCTAGGTGGGGGTGGGGAAGGGTACTTGAGACATTCCAGAAGGGAGACCTCTAAAGGACTCATCAGGGGTGGCTCTGGCATGACACGTGTCAAGTTGCTTGGACCTCAAGCTTTAAGTGCCTACATTATCTAACAGTGCTAAGAGGTTCTCGCTGGAGGATCCCGCTCAAGCTGATTATACCCTCTGCCCCTGAATAATTTTGCGTAAAGCTGGATTAGCCCGGAGCATTTTTGGAACCACATGGGTGGCATTGTGATCATGAAATGGATTCAATGAAATGGGAGATGTTTGCTACATGAACATTGATTGCTTTGAAATTAGACATGAGGAAACCAGGGTTTTGTTTTTTGAGAACTTCGGTAAAGGGGAAGGAAAAACAGGAAAAGGTCCCCCCAAAACTCAGGTTGGATGACCACAGTTACCAATAGAAAATCTTGTCCAGGGACAAGACTTTGGAACAGTGTCTGCCCATCCAAGATACCAAAGGCTTAAAGGCACCTTGCTCGGTGGGAGAGACCAGGACAAGCTGACAAAATGTTGCTCCCTGGTGAAATGATGCTCCCCGCCTCCTGACCACCCTGTCTGTTCATGGAGAGGGTCCCTACCTTCCCTCTGCCATCTTGGGTTAGGAGAAATCGAGTTGGGAGCTGGAATAGTGGTCCTGGGCAAAAGGGATCCCAGTGAAAATTAGTGCTAAGGTGCATTTAGCCCATTGTGTAAACTTGAAAATCTCCTGGGCCAGTTCTGGAGTATCAGAAAGCCTCAAGAAATTTGCTGCATCTTAGGGTAAGAGATAAACAAAAGAGGCTGTCTACCATGACCCAGGGAATGAAGATACCATCAGCAAATAATGTGTAACTTGTTCAGTCTTTCATTTAGAACAAGCCTATATTTTATGGTACCATCCGAATACCTGTCTTTAAAAGAAGGGATAACTTTATGTAGTATAGTTATGTTTTGTGCTGTTTGAAATTATTATCTTTGTAATTATTTTTAACATGTAATGAATTCTCAGAATATCTGCTGTCAATTTTTCCCAGCCTCTTTTTGAGGGGCAAAATTCTAAAACCAGAAAAAGTCCCCTTCACGGTTTCAAAGAGTATTGCAAAGGCCGAATCTGTGGCTGAGTAGGAGACGTTTCAGCAACCATGTGGTCAGTGGCAGTCTCTTACTCAACAACCTACATCACAGTCACATGCTTGGTGGTTTACATTGACCTAAGGTTGATTTTGTTCAAATCTTTCTCTGTTGCTGTTCATTTGTGTTCTGTTTTGTTTGGTTTTGTTTTTTTTAAAAGTCTTGCTGTGGTCTCTTTGTGGCAGAAGTGTTTCATGCATGGCAGCAAGCCTGTTGCTTTTTTTATGGTGATTCCCATTGACAATGTAAGTAAATGTCTGTGGCCTTGTTCTCTCTATGGTAAAGATATTATTCACCATGTAAAACAAACCAACAAAAAAATATTTATTGTATTTTAGTATATTTATATAATTATGTTCTTGAAAAAAATTGGCATTAAAACTTAATCGCATCAGAAGCCTATTGTAAATACAAGTTCTATTTAAGTGTACTAATTAACATATAAT EMBV3_20389 ATAATGAATGTTTCCAATCATTAAGATCTTCTAATTCAGGAAATAGTATCAACAATGCCA Gene BVV0102_410255 - 1 EMBV3_38767 GK000011.2:66933746-66969148 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025217 TCONS_00025224 TCONS_00025219 TCONS_00025221 TCONS_00025211 TCONS_00025209 TCONS_00025222 TCONS_00025212 TCONS_00025218 TCONS_00025215 TCONS_00025223 TCONS_00025214 TCONS_00025213 TCONS_00025210 1 XLOC_014698 Coding TCONS_00025211 XLOC_014698 Coding Coding APLF 11:66840498-66935976 j TSS18355 5156 1 TCONS_00025211_4 509 0.204422032583398 10 0.946102202624716 0.000773627272945204 0.00024028115671405 0.000512110710219684 0.000248048219054239 0.000219470292235402 0.000140092151244233 0.000167445055702623 0.000217053625373396 0.000341378054334543 5.7776662446842e-06 1.36881381504584e-33 3.4356247872345e-43 1.48624170550221e-05 6.52578909258848e-64 2.97658904976123e-05 0.000279325019034125 0.000163230007167634 1.11750314742409e-17 0.000421269415204798 0.000232278590883858 9.98588002614988e-05 3.10377507876576e-26 4.62283167104341e-05 4.89259347985374e-18 0.000421616231125779 0.000489641694344549 0.000570873063210718 1.47959733862818e-12 8.23100618232241e-13 2.20561108069706e-49 NM_001077874.1 APLF Bos taurus aprataxin and PNKP like factor (APLF), mRNA. 0.0 4599 100.00 0.494375484871994 NM_173545.2 APLF Homo sapiens aprataxin and PNKP like factor (APLF), mRNA. 0.0 2818 76.96 0.715865011636928 TCONS_00025211_4 sp|A0JNH9|APLF_BOVIN APLF_BOVIN Aprataxin and PNK-like factor; 0.0 915 95.28 0.99803536345776 1 coding 0 0 0 0 -0.259958735079621 0.164227757824707 0.000972024802389664 0.983472121179968 CGTCACTGGCCGGAGTGGAAGGGCGGGGTTCGGTCCCCCTTGGTGGGGCCCCATCTCCGCGCAGCCGGGGCATACTCGAGGGCAGTCTTTGCTCTACCTCCCCCTGTGTTTCTTGGGGCCTCTCTGGGCCCAGCGCCTGTCGTTGGAAGGTGGAAACGGTTGCAGGGTCTCGCTTCTTGCGAAGGGGTCTGTTTAATCCTCGCCGCCATGTCCGGGGGCTTCGAGCTGCAGCCGCAGGACGGCGGCCCCCGGGTGGCCTTGGCGCCCGGGGAGACGGTCATCGGCCGCGGGCCGCTTCTGGGAATAACAGATAAGAGAGTGTCCAGAAGACATGCCATTCTTGAAGTGGTGGGTGGTAAGCTTCGAATCAAACCGCTACACAGAAATCCATGTTATTATCAGTCTTCTGAGAAGAGCCAGCTCTTACCATTGAAGACAAATATATGGTGCTGGTTGAATCCTGGAGATCACTTTTCTTTATTAGTTGACAAATACATTTTCTGTGTCTTGTCTACACATTCTGAAATGGAAATGGAGTGTACTTTAAGAAATAGTCAAATGCTTGATGAAGATGATATATTGAATGAAATACCAAAATCTTCCTCAGCTGATTTGCCTGATAAAACACCCAGTGCCCCACGGCGGGAAAGAAGTACAGAAACAGCAAAGCCCCAGGCCGCTGCAAATAACATGTCTTTCATAGGTGAAAGTAGAGACTTGAGTAAGCAACAGCCAAATCCTTCCGAGAGGAAAAGAATCCTCCCAGCATGGATGTTAACAGAAAATTCAAGTGATCAGAACCTTTCAGTCATCAGTGGAGGTAATAATGTAACCTGGGAAAGTGAAAAAGAAAGAGTCTGCAAAGATAAAACCCAAGTAAACATAACACAGCCAGGAAAAAAGCGATTAATTTCATCAGGAAGTTCAGAAAGTACATCAGCAAAGCAAGACACAGGAAAAAAGTGCAAAAATGATGATCAGGAAGAGTCTATCATTTCATCCAAGGAAATGCCACAGTCATTTTCTGCAGCCATGTTACATAACACAGAGATAGATAACACTAAGACTAATCCACAGAGAAGCAAAGTCCCAGTAGAGGCACTTGGTAAGGTTTCTGAACATAAAATCATCACTAAGGGAAGTTCAAATGAAGACAGCACGGCGAGAAGTTGTTCTGAGAGTTATTCCAGTACCCAGAGCAAGTCTTTCTGTGACAAGCCTCAAAAATCTCATCCTGAGCCCAGCTCTAATCCGCCCAGTCCTGAATGTGTGCAGGCGAAGGCAACCGATTCAGTTCCAAATGGTTCTGAAGAAAACAAGGTACAGAGAACATCCTGCATGTATGGGGCAAACTGCTACAGGAAAAATCCTGTCCATTTTCAACACTTCAGTCACCCTGGTGATAGTGATTATGGAGGTGTAAACATCACGTGTCAAGATGAAGCTGATGACCGACCTGAATGTCCCTATGGAGCATCTTGTTATAGGAAGAATCCCCAGCACAAGATAGAATATAGACATAGTACATTTCCAGTGAGAAGCATTTCAGATGAAGATGACAATGTTGGGCAACCCAATGAATACAACCTGAATGACAGCTTTATAGATGATGAGGAAGAAGAATACGAGCCAACAGACGAAGATTCCGACTGGGAACCAGAAAAGGAAGACCTAGAGAAGGAAGATATGGAAGGGCTTTTGAAAGAAGCAAAAAAATTTATGAAAAGAAAAAAGTGACTCCTCTGCAGTAATATATGGCTCATATTTACTGTTTCTTTATGGAAAAATAATTCAGGAAGCACTTAAGGGATAATTGTTTTTCTGCTTTTTATGGTTATGACTTTACTATTGACTCTTCACAAATGAAACATTGAAATGTCACCCTTCAGTGTAGTGGATGAAATTTGTTGCTTTGCTTTTTCTATGTTATTTCAAACATCTGGAAATAATAAGCAGACAGAGTTAAAAAGAAATAATTGATATTTTTCATGTACTTTATAATAAAAAGTAAACATCATAGGTTGCAAAAAAAAAAGGTCTTTTTTTCTTTTTTCCAAAGATTCTGTCTTTAGATAAAATACTATGCAAATATAACCAGGCAGATTACGTAACTGGTGGGAAAGCATGCTTCTTTTCATTCCTATTGAAGTAATTCTTAAAGCAGAACCAGACTTTAAAAAATACCAGCTATCATATAATGGCTATTATTTTTTCTAATGTCCTAGATGTGAGCTTTGCAATTTCATTGACTACTTTCGTTCTTTGAAACTTGGGGAAATTAGTACAAAATGGATACTGAAAATAGATTCAACTAGACTACAGAAATGTCCACCATGCAGGGAATGCTATTTTATGTCCCAAGTCTAATTTACTATATGTTTGAGTTTAAAAGTAGAAAACCTGAAAGAATTTGACCATTTCTTTTTCAAACAAGTCCTGCCTGATGCTTTTAACTCTCATTATGCTATTCTTAAGAATATAGGGATTATTTTTAACCATAATTTTCTCAAATTATATTAGTTCTTTTATCCTCAGATGACAGTAGCAAGTTGTCTGCCAGCATTCAAGATTCTGGCCTTTTATTTCAAGAAGAAACCCCTTCTCCAGTTTTATGTAGTATAATATTTCTGCATCTCTGTTCTTAAATTCCTTTAGGCTATGTAATACTCTTCATTTTACATGACTTAGAATCTTTGAAATATAGTTTACAATCTTTAATATGGGTTTGTACAAACAGCAGTAAATATAGCTTTGAAATTGTAAATCATAAACTAAAAGTTCCTCATTAAGCACTAATATTTTATATTCTACGAGGACCTAAAAATGTATATCTTAAAAGAGCAGGACAGATTTGTAATTGTTTTCTTAGTGTTTTTAAGTTTGTTTTCAAATAATTGCATAATATTAAAATTTACTTATATTACAGCAAGGAAAAGATAAATATTTTTCTATTATCTTTTATTCTAATTTTTCTCTCTGTTGTTATTTAGAAGCTAATTTTCTCTTCTAATGTCCCTTTAGTCTTCCGGGCTTGACAAACCTGTGAAAAAAATTCTTTGAACTTACTTTTACTTTCACTTTGCACAAACTTAATCCTTAAAGTGTTTCTTAATCCATTCATAGATATATCCCAAAGGAATTAAAAACATGTGTCCACATGAAAACTTGTACACAGTGTCGGTAGAAACATCATTTGTAACAGTCAAAAAGTGGAAACATCTAAATGTCTTATCAGCTGATAATGTCGATAAGCAAAATGTGGTCTATCTTTACAACCAAGTATTTTTTGGCCAAAAAAAGAAGTGAAGGATTGAAACGTGGTACAGCATGGATAAACCTTGGAAACATTATGGTAAGTGAAAGAAGTCAGACGCAAAGGCCACAAATGGTATAAGCTCAATTATATAAAATATCCAGAACAGGCAAAGCCGTAGAGACAGAAAGTGCATTGGTAGTTGCCGGGGTCTAGAGAGAAGAAGAGTATCTTTCTGAATTGATAAAAATGTTCTAAAATTAGTGGTGATGATGTAAAACTCTGTAAATATACTAAAATCCATTGAATTGTATACTTTCTATGGGGGAATTTTATGGCATATGAATTATATATGTGTCAAGAAGGCTATGATAAAGAATATAAAAGGTGACATTGGCCTTTTAGAAAGAAAGAAAGGCGTTCAGTATCAGAATATATTCTTCTTAGAAGTTATGTGATAGCTCATGTTAATTTTTAAGAATAGTTTGATGTGCTTTGCATAAACATCCTGAAGACACTTTTGAGTATAACGAATGTATAAATATTTAACTTCATTGTAATGAAAATTTCCTACTTGGACTATATTTAAGTGTATGATTTTCAAAATAGAGGCAAAAGTGATGAAATTGGTGGGCTCAAAAGCATTGCTAACAAAACTTGATTTAGTTGCTGTCCTAAACAGTGGATTGAGAAACGACTATCCCTATCATGGTATTCATAGAATTTAAACTATATCCTAACCTCCTCCTTCAAGCTAAGAATGGTCACATACATTTTTCTCACTAATGTGCTTAATTCGAAAAGCAAATGTTTTTTGTCGACTTCTTGAAGTGAGGTGGGTTTTCTGGGACCTTGGGAAGCTGGAGTCATGAAGATTTTCAGTGACACATGGGTATTGATTCTGCTTTTCACCCAGGTTTGAGGATGGCATTGTTGATACTATTTCCAGAATTAGAAGATCTTAATGATTGGAAACATTCATTATAGTGAAAAGAAATAGATTATGAGCATACTTTTTCCAGAATGGTGATGTAAAGTTAAATGGATAGTGACTTTCCTCTGATTTATCTGTGCAAAGTTCAGTGTCACCAACACATCCCATGGAGGCAGAAACCACACACCAGCGCCTACATCTAGCCCTGCTCTTTGAGTTCACCTTTTTGTGCCCATTACTTTCTCTTTCTTGAGGAGGAATCTGTAAGAGAGGCTCTCTGTGTGTGTGCGTTCTTCCTGCCGGTCTGCAAACCTACAAAGCTGCTCCTCCACAGTAGGTATTGAAAGAAAAATGATAATAATTATTGCCAAGATCGTTACTGGCCATCCTGATATAATGTACACAATAAATTTGATTATCATAAGCAACCCCAGTTGTACTCTGTTGTGCCCAAGACCCCGTCTTAGGTGCTGGTGATTCAAAGAAGAATAACATGGAGTTTCTGTTTTCAGTGTCCTTACAGTCTACTGGGGAAGATAGGAATATTTATTCATTCAACAGTGACTACAGAATACTATGGAGAATACAAGGAAGAAAAGGACATAGCTTCTACAATCAGAGAGCTTGCAAAGGCAGTGAGGCAAATATGCAAATAACAAAATGGGTAGAAATGCAATAGTCCGAGAAAGGAATGCTGGAGTATAATTTAAATGGCCTGTCTTGCTGCGTATTGAAATACAGCCTCATTCTTGAGGAAGAGCCTTTGTCTGATTGAGTTGCAAGCTGAACTTGTAGATTTTTTCATGGAACACAACCTTTATCTTCAAAAATGACTGGCAGACATACTACAGTTATTCAGAATGGAGTGTGTGGCTGGCATTTCCTCAAAAATGAACTTAGCCTATTTTTTTTCCCAAGGAAAACAACAAACAGTATATATTATAATTGTAAAAATGAGCTTTCAAACAA EMBV3_15657 TGCACATGAAGCGTTTTGTCAAGGATCTGGGAAATCCCTCAAAGGTGTATGAAGTGGTCT Variant GeneID:100125835|PCYOX1:NM_001105474:2_cdna 355^894 2 EMBV3_24874 GeneID:100125835 11 GENE PCYOX1 MGC157353 prenylcysteine oxidase 1 EMBV3_37925 CCATGTCCACTACCCGCTTCCAATGAGATTTCTCCAGTGTCCCCCAGACCTGACTGGAAA Gene GeneID:616044|PIGB:NM_001078055:4_cdna Constitutive 0 NULL GeneID:616044 10 GENE PIGB NULL phosphatidylinositol glycan anchor biosynthesis, class B EMBV3_23935 TGGTGAAAACAGTGGCAGTCCCTGACACGGGGGACAGTGTGGAACTCTTCATTTTTGACT Gene GeneID:511981|RABL4:XM_002692749:76_cdna Constitutive 0 NULL GeneID:511981 14 GENE RABL4 NULL RAB, member of RAS oncogene family-like 4 EMBV3_10549 CATGGGCAGGGGAGGAGACAACGTTCAAGTCACAGTAATCCCTAACGATAAGAAAGACAG Gene GeneID:539091|TRIM45:NM_001014952:71_cdna Constitutive 0 NULL GeneID:539091 3 GENE TRIM45 NULL tripartite motif-containing 45 EMBV3_16167 CCGGTCTGGAGCTGCTCACACTTCCCCACGGGCATCGCTTGAGATTGGAATTGCTGGAGA Gene GeneID:510173|SH2D3A:XM_002688904:182_cdna Constitutive 1 NULL GeneID:510173 7 GENE SH2D3A NULL SH2 domain containing 3A EMBV3_19782 TTCTATTATGTAAAGGTTATTTCTGTGTATATCTCAACTGTGTTGATTGGTTTTATACCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41473 CTCTAATGTTGCCAAAGAACTGTTGATGGGATTGAGTAGCCCTGCGACTGTCTGTGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39331 GAAACATCCCAGAATGTCCATCTTCACTACAGAGGGGAGTCTTGAGTGGGGTCTTGCTTC Gene GeneID:783071|LOC783071:XM_002690050:19_cdna Constitutive 0 NULL GeneID:783071 9 GENE LOC783071 NULL similar to FtsJ homolog 1 EMBV3_27580 GTGGTTCATAGGGTGGGGGTGTGGTAGAAAGCTACTAGTAATTCTGTGCTCTTTGGTGTC Gene GeneID:509485|PERP:NM_001034350:5_cdna UTR3_Alt 1 NULL GeneID:509485 9 GENE PERP MGC127602 PERP, TP53 apoptosis effector EMBV3_21480 CCCCCCACTCTAGAGCCAGAGAAGACAATGACTGTAGAGGAGCGCCGGACTGTGGTGGAT Variant GeneID:506895|HAX1:NM_001045953:97_cdna 612^718 2 EMBV3_00983 GeneID:506895 3 GENE HAX1 MGC137143 HCLS1 associated protein X-1 EMBV3_14824 TAAGCTTGCAGATAAGTGATTTGCCCTTTCAGGCAGGCCACTTTAATACCACTCGGTAAG Gene BVT0102_315610 + 1 EMBV3_20516 GK000013.2:37291231-37303892 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045101 TCONS_00045104 TCONS_00045105 TCONS_00045102 TCONS_00045103 1 XLOC_026347 Coding TCONS_00045101 XLOC_026347 Coding Coding RAB18 13:37296693-37331321 j TSS32989 8907 3 TCONS_00045101_12 123 0.36319748512406 7 0.742975135010252 7.51716798255872e-05 3.60835282524071e-10 5.1155881075767e-07 2.68800149153374e-08 3.06327661231304e-11 4.9416453687424e-08 2.40144753682438e-09 8.50056310861804e-06 7.42220150827472e-06 0.000177008802847147 6.12016816151723e-09 1.57450325495671e-08 7.99550677975329e-08 7.17890037073341e-05 1.14129889453775e-06 3.81122201615027e-06 0.00173036859544489 0.00270990565495853 5.48573255287933e-07 1.16808624303864e-16 1.90360981036514e-11 0.000476291622862664 0.000348524421240128 0.000520794399464738 1.99486574915657e-25 8.20579594178883e-10 2.45232394224982e-05 6.22923343353104e-05 4.41928922207546e-10 1.20451560188816e-11 XM_005214339.1 RAB18 PREDICTED: Bos taurus RAB18, member RAS oncogene family (RAB18), 0.0 3896 100.00 0.242393622993151 NM_021252.4 RAB18 Homo sapiens RAB18, member RAS oncogene family (RAB18), transcript 0.0 2488 81.09 0.28999663186258 TCONS_00045101_1 sp|Q0IIG8|RAB18_BOVIN RAB18_BOVIN Ras-related protein Rab-18; 2e-60 187 100.00 0.98876404494382 1 coding 0 0 0 0 -0.151583025685487 0.39077826644522 -0.0211623725339976 0.670255471564956 GCAGGAGCTTAAGCTATGGGCCACTTTTGAGAATCCAGTGTAATTGTTGTTTCTTGCTCTGCCACGTCATATAGAGCCTGCTCTTGAGGTTCACAGATGATACTTTTGATCCAGAACTTGCAGCAACAATAGGTGTTGATTTTAAGGTGAAAACAATTTCAGTGGACGGAAATAAGGCAAAACTTGCAATATGGGATACTGCTGGTCAAGAAAGATTCAGAACATTAACTCCCAGCTATTATAGAGGTGCACAGGGTGTTATATTAGTTTATGATGTCACAAGAAGAGACACCTTTGTAAAACTGGATAATTGGTTAAATGAGTTGGAAACATACTGCACGAGAAATGACATAGTAAACATGCTAGTTGGAAATAAAATTGATAAGGAAAATCGTGAAGTTGATAGAAATGAAGGCCTGAAATTTGCACGAAAGCATTCCATGTTATTTATAGAGGCAAGTGCAAAAACCTGTGATGGTGTACAGTGTGCTTTTGAGGAACTTGTTGAAAAGATCATTCAGACCCCTGGACTGTGGGAAAGTGAGAACCAGAATAAAGGAGTCAAGCTGACACACAGGGAAGAAGGCCAAGGAGGCGGAGCGTGTGGTGGTTACTGTTCTGTGTTATAAACTCTGGGAAACGCCATCTCTTGCGTATTTGATCAGATAATGTCATCTTTCTGTATATAAACTCTCTTAACTGCTATTTTAGGGACCTTGCAGTTTGCACATATTTGTTTTGTATCATGGCAGTAAATATTTGTGAGAAAGCCCACTCATTGACTTTTCCAGGTAAAACGTAAGCATGCAAAGTTTGCAATCTGCAGTTTTTTATGTAACATAAAATAGGTGTACCTTTATAAGTACATTTGATTTTATGATTTACATTCATCATGTGATTTTTTAAAAATCCACCTCTCTAGTATATGTTGATACAAGGTCTGGTTTTGGTCTCTTTTTCGCTTAAATACTTATCAATTACTGAATTAATTGGTATCGTAGAACTCCCAGGACTACTGGGAGATAAACAGATGTCATCAAACCTGGCAGATTTCCCTTCAGGAATAACAAAGAGCATGATATTCCACAGCTTTCCTAGGATGTTCGCTGACGGATTCTCTTTAGTACTAAGCAAAATCCTCTTTGCAGGATGTGGTCGAGGCCAATTTATAATTAAATCCCCGTTTGTTCTGACGATACTTCAGAAGTAGCATTAATATGTTAAAGAAGTTTGGTCTTCCTTGACTTGAGGAGCAGCTCATTGCTTAGCTGGAGTTTTAATTCTGTGATGTGTACATGGCTTCATCAGCCTCTGTGCAGCGTTTTGGGTTGTGTGGTATTTGACAGAATCGCAATAAGATTCCCCCATTTTGGTTTCAGAAAGACAGGAGTAGTATGTTTGTGTAACTCATGTAGCACTTATCACCTTTAAAACCAACACCTTTTCCCATAAATGTTGGTGGTGTTTGTTCCGGTACTTCAATTATAGCTTGTGTAATGTTAATGAATATCTGTATCTTATGACTTCCATAAATGACTAGTTGATATTCAAAAACATATTTCTGTGTTTTGAGGGTTGGGGGAAAAAACACTAAACTATAATTTGAAAAAGGCATATTGCTTCCAGATTTCGATGTGTATGGAAAAATACTGTTGCAGTGAAAATCTTGGTACAAACTTGTACAGACTAATAAATCTTTTACACAGTATTCAGTTTTGTAACCTCCTGCTATTGTACATTGTATATTTTTTTCACTCATGTATTATTTAATATACATTGATCTCTGCTATTTTAAGCTTGCAGATAAGTGATTTGCCCTTTCAGGCAGGCCACTTTAATACCACTCAGTAAGATTAATAAGAAATACTAATTTCTGGGCGGTTTGTTCTCTATATACAGTTGCAAACGATAAACATTTTTGTGGGTCACCTTTACAATGCTTGTGATAATAGACTGAAATGTATATCTTCACATAAGAAAACCTTAACATACTACATGGTTCACACTTCTTAGACTATATTACATGGGATTAAAGGTTTTATGCATTACGTATGTTTTTACAGAAAATGAAACATATACTACTACTTTAATGTTAGAGAAAGATAGCTAACACATGTACTTATGATTTGTTGTTACATTAAAACTGTAGATTTGTATATGTGGTTTCTGTATTGACATTTCTGTTTATTGCTATTTGCTCCTTGAGCCATAGAATATTCTTCCTATGCATTGGATTGTCTTTATTTGGTCAGAATTTGGATACATATGAGTCAGTTAACTTTTAACAACTAATTTTGTTTGATTTATATTGTAACCTTTTATAGTTTTTTAATAAATCTAGCCTGCTTTCCCTAGATGCATTTGTGCAGGAAGTATTATACATTTCCTTGTTGCTCTCATCAGCTGAGGAAGTCCTGAATGTTACACTACTTCCTATATTCTGTAGGAATATAGAATATATATTATATATATATAACTCTTGTTGCAAGAGTTATTCTTGTTGCAAGCTTCTTGTTTCATAGTGTAGGTTTTCTAAATGAAGTAGTTGTAATAGCTAAAAATTGTCACTTAAATAACAAGATTTTGTCAGTTCTTCATTTCTGAAATCATTTGAAGTTGAGTGCCTTTTGCAGATGGAGCAAATTAGAACGATTAGAAGTTAGGCTACCACTCCAGTATTCTTGGGCTTCCCTTGTGATTCAGCTGGTAAAGAATCTGCCTGCAATACGGGAGACCGGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGACTACCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTATATATAGTCCATGAGGTTTCAAAGAGTTGGACATGACTGAGCAGCTTTCACTTCACTTCATTCTGAGTTCTGGGAATATTCATATAGAGCTAAACAAACAAATTCGGTTTATATTAAGAGGGATAGTTAACATTTATTGAAGCTTCCTTGATGTCAAGCCCTGTTCTAAGTGCTGGTTTATCTCATTAAACCTCACAGCAACCTTGAGAGATTGGTTGGTACTGCTATTAGGCCCATTTTAAAGGTGAAAATAATAAAATACAAATATTTTAAGGAACTTCCCAAAGATCACAAAGCAAATCAGTGAGAGTTGGATTCCAGTCAAGGCATCTTCACTCCTGAGTCCATGCTCTTAACCACTGCTCCCTTTGCTATGGCTAGTCACTAGCTTTCTGTTTTAAAATAGCAGGGTTATCATTCTTTTGTTATGTGTAATAGGTGTATTTCAGATTTTTTGGTTATAGAGTAAATCCCATTGATGTAAACCAACTGTGTAAGTCATTTTACCTAAAAGTTAAGGTAGAAGAGTAGGTGGTCTCCTAGTTCTTTTACCTCCTCATGGTGGAATGAAAATCTTTGACCTAGAAAAGTCAGAACTTATGGCACCTTAATTTCCTGTTTATAATTGGACATGAGAAAAGTTATTAAATCTGGGAATGGCCTTTTGCTCAAAATTAAAATCTAGGGGATGTTTTCATTTCAGGTACTCAGCTGCCATGTTCAAATTCACACTTGGCTTTCTAATTGAACACAGTGGAATTGGTCTTGATTTTGATTCATTGTGACTCGTGTACTCAAATACACATGATTACATGATTCTGTTCCAAGTGTGGAATAGCACAGACCTACCTCATATCTATAATATATTTAAATACAATTTAATGTGTCTTTTTTCTGATTTTCAAATGAAGTGGGATAATCCTCTTGATCCTATAGGTTGTAGATCTTTGCAGTATTCAATCCTTATGCTTCTATATTTTGAGGTTCATCTCACCAGTCATACTTAGGAGATTTTTATGTCCTTCATTTATTTTCCCAAGTTAGAGATGGGAATAAGATAATTTAATAAGTTTTAGATGATTTTATACTAGTTCTGACCCCAGCTATGCTGAGGGTAATCAACTATAGATTTCATCTTGGATTTTGTCTAGAAATGTTGAAGGAACAGAACGGAAAGAATAAGCCAAGTCAAGATTTGGAGATAAGGAATATAGGTTTACCCAGAAATCTCTGGGGTTTTTTTGTTGTTGTTTGTTTTTAATAGTAACATCTGTCAGGTTGGAGGAAAGGAAACATGACTCAAGTTCTGTTACATTCTGGCCTTTAAGTTTTCCTATTTGTTGCTAGCCTTTTGTTTCATATTTATGAATCAGTAGTGTTTCTAGGGATGGTATAAGCTTGTTTCATTGCCTCTTGGAGTTAGAGCTGTTTTGTCACAGACGTTTCCAGTAGTGGTTGAGCTTTTAGTTTTCGTGGGGCCTGCTTCCTCACCATCTCTCTCACACACAGCAGTGTCTTTTTCTTTCACTAACCTGATAAATAACAAAAGTATGCAATTTTATTGTATTTCTTGGATTACTCGTGTGGTTGAGCACTTCTAGTATTTCATCGGATATTTGTATTATTTTCTTTTATTCCCTTTTCATGTTATGTTGTGTTCGCCCATCCACCTCCTCAGAATACCATCCCCCTTTTCTTTGGATAGTGGCAGCCCATCACACAACGCAGTTTGAATGGGACTGTCACACCGTCGGCTCCAGAGCTGACCTGGTTCTCTTAAACCAGTGCCACTTGCCCCCTCCCCCCAGGACATGGTTCAGGGATGGGTGACAGACCCGGATCAGGCCACTTAGTTACAGCATGTTTGCTAAGCCTCCCTCGGGAACTGCAGAAGGTGACACTTCGTTGGAGATAACGTGGTGTGATAACTCTGAACTTTTTGTAGCCAGTTTTTCTGATTTAAAGGAGCCAGCTTGAGGGCTGTACTAAGAAAAGGAAAGGGAGTCGGAGTTGGAGCTTTGATGAAGTCTGGAGCGTCTGGATCAAACTGCACCTGAAGTTAGCGTTACTTCTGGACTTCTCACTCACGTGAGCCAATAAATTCTCTTTTTGTTTAAGCCAGTTTGAGTTGGATTTTTTTTTCTTGTAATCAAAGCTTTGCTGTGGTGTATGTGGTCTTTGTGGGGACTCTTCCTACATGGAGTTCAGTGTGTTGATCACTATCACTTGAAAAGCCATTATTCTTAAATAACTTGATATTTTAGTGGGGTTACTTTCATATATTTTTTTGTGGGTATATACAAGTATCTATTTAAGGCAAAGAAGAAGAGGGTGGCAGAGGATGAGATGATTAGAGAGCATGACCGACTCAATGGACATGAACTTGAACAAACTCCGGGAGATAGTGGAGGACAGGAAAGCCTGGCTTGCTGCAGTCCGTGGGATCACAAAGAGTTGGACACGACTCAGCAACTGAACAACAGCAATATAATTTTGAGGGCTTGCTTCATAGGGTCTCGTGGTTTTGTTTTTTTTTTTTGGTTTAATTTCCTCTGTCATCCTAACACTCACTGTCCCCCTTTCCTCCCTGAGATAATCATTGTTACAATCTGGCATGTGTATCCTTTCTGCTATATATATGCATTATTTTACTCTTGCTATTTTACAAAAATGAGATTATCTGTATATTCTTCTCTGCATATTGGTGTTCTTACCTAACAGTAGATTCTGAAAATCCCTTCAAGCCAATTTGGATGCATCTAGCATCTATTTCCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCAGGTAGGCTGCAATCCATGGGGTCGCTAAGAGTCGGACACAACTGAGAGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGAATGGTGGAGCCTGGTGGCCTGCCATCTATGGGGTTGCACAGTCAGACACAACTGAAGCGACTTAGCAGCAGCAGCATCTATTTTGGCTCCCCAGGTAGCACTAGTGGTAAAGAATCTGCCAATGCAGGAGACACAGATTCATGGTTTGATCCCTGGGTTGGGAAGATACTCTGGAGGAGTGCATGACAATCCACTCCAATATTGTTGCCTAAGAAATTCCATGGACAGAGGAGCCTGGTGGACTACAGTCCATGGGGCTGCAAAGAGACACAATTGAGCATACACGGCATCTGTTTCAATGATTTCACAATATTAATATTCGATGCTGTGGCTTATCACAGTTTACTTAACCATTCCTCTAGTATTGGGCATTTATGGTGTTTCCATTTTTGCCTTTGCAGATGGTGCTGCAATAAATAGCCCTGTATGTATATACCTTTTTGTTTCTGTGGGATCCAACTTCAAAGAGTTGGATCCATCGGCCAAAGAAAATTTATTTTTTCATTTTGATGTGTCTTGTAAATTGCTTTCAAAAATCTGTAACAATTTACATTTCTATTAGCAGTATGTAAAGATACCTCCACCTGCATTCACCATCAGGAGCAGGAGGTGTCCTCAAGTTTTAAATTTTGCCACTTCGGTATTTCTAAGATATTCGCTTACGTTAGTTTGCATTTTCTGTAGAGCATTTTTTCATGTTTGTAGGCTATTTGGAGTTGCTCTTTTTTGGAATGATTATTCATATCCTTTGCCAATTTTTCTATTCAGTTTTTTTTTTTCTGATTTTATGATGTTATATGAGCTCTTTATATAGTACAGATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTACCGTTTCCTTCTCCAGGGGATCTTCCCACCCAGGGATTGAACCCTGGTCTCCCACATTGGAGGCAGACGCTTTAACCTCTGAGCCACAGGGAAGCCCTAGTACAGATACTAACCCATATGTTTAAGTTTTGAGCATTTGTTTCTACCCCAGTGTTTGCTTTTCAGTTTGTTTATGCTGTGTTTTTTCTTACAACTTTTAAAAATATTTTATTATACCTGGTGGCTCAGACGGTCTGCGTACAATGCCTACCATGTGGGAGACCCGGGTTCAATCCCTGGGTCAGGAAGATCTCCTGGAGAAGGAAATGGCAACGCACTCCAATATTCTTGCCTGGAAAATCCCATGGATGGTGGAACCTGGTAGGGTACAGTCCATGGGGTCGCAAAGAGTTGGACACGACTGAGCGACTTCACTTTCACTTTCGGGTTCCTCAGCTCTTAGACTGTACATGCAAATCTCCTTAACCTCTTCTGAGACTGTTGTTTTAGTTTTTTCTTTTTAAACCCTTAATAACTTAGAGTTCACTTTTGCTTATGACACAAGGTAGGGAACCATCTTCTTTCTCATATGGGAGCCAGCACTTCCCCACTGAGCTGAAATAATCATTTTGCCCTTGATAAAATTCCTGTAAGTAGTGGAGTCTACTCTGGCTTTCTATTTTTATTTTAGTGTCTCTTCACCATGGAAAGTTATGGATTTTAGTGTGTCTAGATTTCTTTAATCCTGTGTGTTTGATTTATGCTTTAAAAGCATTCTAAGAAGGGCTTTGCAGGTTTCATCAGACAACTCCAGAGGCCCGACAAAACCAAGGTTTTCATGGTAGTGGCTCTATAATATGTTCATGACTGATAAGGCAAGTTCTTTCCCATTCTTTTTCAATTTGTTTTTTTACATATGATCCTTCATTTTATTATCCTTTGCCCATTTTTCCTTTTCGTGGTCTCTTTTTTTTAACAGAGGAGTTCTTTATAAAATGTGATATGAGTACTAGTCTTTTGTCACTGATATATATTGCTGGTCTCAAAATAGCAGTTTGTCTTTTGAATTTGTTTGAAAAGTGCAAAGTTAAAAAAAATTTTCAGTAAAAATTTAATTATAAAAACTAGAATGCTTATTGAAATCACTTGATAAATATTTCTGTGTTAATTGTGAGAAAACTGATAATCTAATGGTAAGACTTGCCATTAGGAAACAAGATATCTTTCTATTCAGAGTTTATGCTCTTTTTATATTTATACTTTTGTTTACATAGGTTCTGAACCTTCTTTTTAAAAACTATTCCTAAAAACTTTTTTTTAGTGTGAGTAGATTTGGTCTTCTAATTTTGGAATCTATGTAGTTGATGCTAATAAGGAAAAGCTATTCTATCCAGCTGACTAATCAATGGTACTTTGTTTTAAAATAAGATTTCTTTCGTTTTCTAGGTAAAAGGGAGAAAATATAATTGTAATTTTGTCATCGTTCAGTCGCTAAGCCATGTCTGACTCTTTCCAACCCCATGGACTGCAGCACACCAGGCTTCCCTGCCCTCCACTATCTCCTGGAGTTTGCTCAAGTTTATGTCCATTGAGTTGGTGATGCTCTCTATCTCACCTCTGCCATTCTCTTCTCCTTTTGCCTTCAAAATTGCCTTAAAATTGTAATTTTAATACACATAAATGTTTATTTAGAGGAAATTAACAGCCATCTGTTTCATTTCTTTTTTTTTGTTTGTTTCATTTCTAATACCATTTTGAATTTGTTTTCTGACAAAGTGGAGGAAACCTCCCGTTTCACAACCGCTGCTAAGGTCTGCAACCTTCCATTCAGTTCCTCGGTAAGCCCTCCCAGGCCAGGGCTCTTAAGCAGGCCAAGCTCTCAGGGCCACCATTTTCTGCTTTTTACATATGCAATCATAGACTGGGCTGTCATTTCTATTGATGCTAGCTTCATGTCTTGCAAGATTGATAAACTTGAGGATTCTTTTTCTACATGCTGGAATACTTAATTTTAAAAATGGGTATTGCCTATTTTTTTAAATTATTTTAATTGGAGGCTAATTACTTTACAGTATTGTAGTGGTTTTTGTCATACATCAACATGAATCAGCCATGGGTGTACATGTGTTCCCCATCCTGAACCCCCCTCCCACCTCCCTCCCCATCCCATCCCTCTGGGTCATCCCAGTGCACCAGCCCTGAGCACCCTGTCTCATGCATCGAACCTGGACTAGCAATCTGTTTCACATATGATAATATACATGTTTCAATGCTATTCTC EMBV3_34281 ATGAGAGACCACAGCAACCCTGTGCAGTGAGACCAAGTGCTCAGATCCATTTGGGATTAC Gene BVV0102_254006 + 0 NULL GK000008.2:83392673-83518735 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04646 CCCTGACTCAGCTAAATGATGCTCTTGGTGACAAGTCTGAAACTCTTCTCAGAAGAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29527 CATTCTCGTGGGCACCCTGATAGCAATAGGCATCTTCCTCATCCTCATCTTCACCCACTT Gene GeneID:508777|CDH16:NM_001015550:150_cdna Constitutive 0 NULL GeneID:508777 18 GENE CDH16 NULL cadherin 16, KSP-cadherin EMBV3_22275 GGTTATGGGGTCCACCTGCTCACCCACGTGACTCTTCAGCCATCCTAGACTCCTCTTTTT Gene GeneID:786620|LOC786620:NM_001105641:200_cdna Constitutive 1 NULL GeneID:786620 11 GENE LOC786620 MGC155067 hypothetical protein LOC786620 EMBV3_39526 CAGGGGCCAACATAAAGGCCATATCACTGTTGTCTCAGTAACAGACCGAGTTTACCCCAG Gene BVT0102_247800 + 0 NULL GK000002.2:90340659-90354890 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105797 TCONS_00105798 TCONS_00105799 1 XLOC_062645 Coding TCONS_00105798 XLOC_062645 Coding Coding TRAK2 2:90351533-90424848 j TSS77975 6632 1 TCONS_00105798_5 913 17 0.909771667075865 0.00195636753336935 0.00284080875247972 0.00197135288414123 0.00140219188760282 3.72707954723411e-08 4.60509530226395e-05 0.00127742476496406 0.00118750090977318 0.00189317278577752 0.000744567212362096 1.77488083078935e-11 8.55299892242492e-05 0.000326055439797884 0.000996413963183339 3.98647675200205e-05 0.000810637985112176 0.000113589605089399 0.00135407263327624 0.00106463591754283 0.00182040896189748 3.33952354576436e-08 0.000196840183789507 1.52409869513833e-05 0.000566942375256622 0.00263857620309923 0.0020519128930984 0.000519748641766652 3.40484169698289e-20 0.000267446313363716 2.24043750693721e-09 NM_001206233.1 TRAK2 Bos taurus trafficking protein, kinesin binding 2 (TRAK2), mRNA. 0.0 6024 100.00 0.503468033775633 NM_015049.2 TRAK2 Homo sapiens trafficking protein, kinesin binding 2 (TRAK2), mRNA. 0.0 5002 85.23 0.667219541616405 TCONS_00105798_5 sp|O60296|TRAK2_HUMAN TRAK2_HUMAN Trafficking kinesin-binding protein 2; 0.0 1572 89.73 0.998904709748083 2 coding 0 0 0 0 -0.122705553657679 0.415160887998417 0.0117959610515104 0.807302638319726 ACAATTCCCAGCAGGTCGTGCGCTGGCGCCGTGCAGGCTGCTGGGAGAATGGGTCTCCTCCTCTCTTCCCCGATTGTGTGGGGGCTGTCATTGACCTGGCGTCGCTGCAAAACCGAAGTCGCTGAATGATGATGTTGTGAAGTTGCCCGCCCGTCCCTGCCACGCCCAGGTAGTTTTTGGCAGCGGCGGCCGCGCAGGCTGCTGCTCTCCAGCTGCCGCTTCGTTGGAGACTTTTCCCTGAGGGAGCTTGGGCGTTGGACAGAGGACGCCAGGTCATTCCTGTCATGACCATCCAAGGTGTGATAATCACATGAGAGGACTCTGCTCCAGATGTCATTTGACTCATCAAACAAAAATCTATTTAAAAGCAAATATCCCTTTGACCAGAACCTTTCTTTATTCAATGGCTTGATGGATTTCCTTTACTCTGATTCAAACCAAAGCTATCCTTCTCAACCAAAACAAAAAAGGATCTTGCATGAGTCAATCCCAGGATGCCACTTTTACAGCACCAATGGGTGAAGAAAACCTCATGAATATCAATCACAGAGACTCAGAGAGCATCACTGATGTCTGCTCCAATGAAGATGTCCCTGAAGTTGAGCTTGTGAGCCTGCTAGAAGAACAACTACCCCAGTATAAGCTCAGAGTGGACTCTCTATTTCTTTATGAAAACCAAGATTGGACTCAATCTCCACACCAGCAGCAACATGCATCTGACACCCTCTCTCCAGTACTTGCTGAAGAGACTTTCCGTTATATGATTCTAGGCACAGACAGGGTGGAGCAGATGACCAAAACTTACAATGACATCGACATGGTTACACATCTCCTGGCAGAGAGGGATCGTGATCTGGAGCTAGCTGCTCGAATTGGACAAGCTCTCTTAAAGAGGAACCATGCATTGTCTGAGCAGAATGAAACCCTGGAGGAGCAACTGGGACAAGCCTTTGATCAAGTTAATCAACTGCAGCATGAGCTGTCCAAGAAAGATGAGTTGCTTCGAATTGTCTCCATTGCTTCTGAAGAGAGTGAAACTGATTCCAGCTGCTCTACACCTCTTCGCTTCAATGAGTCCTTTAGCTTATCTCAAGGTTTGCTGCAATTGGACATGCTGCAGGAAAAGCTCAAGGAACTGGAAGAAGAGAATATGCTTCTTCGATCCAAGGCTTGTCACATAAAGACAGAAACTATTACCTATGAAGAGAAAGAACAGCAGCTTGTCAGTGATTGTGTTAAAGAACTTCGTGAAACCAATGCTCAGATGTCCAGAATGACTGAAGAATTGTCTGGGAAGAGTGATGAACTGATTCGATACCAAGAAGAGATTTCCTCTCTCTTGTCTCAGATTGTAGATCTTCAGCACAAACTTAAAGAACATGTGATTGAGAAGGAAGAACTGAGACTTCACCTCCAAGCTTCCAAAGATGCCCAAAGACAATTGACAATGGAGCTTCATGAGTTACAAGACAGGAATATGGAGTGTCTTGGAATGCTACATGAATCTCAAGAAGAAATAAAGGAACTTCGCAGTAGATCTAGCCCTGCAGCTCATCTCTACTTCTCTCAGCCATATGGAGTTTTCTCTGGGGAATCTCTGGCAGCTGAGATTGAGGGGACCATGCGTAAGAAGTTGAGTTTGGATGAGGAATCTTCTCTCTTTAAACAAAAAGCCCAACAGAAACGGGTATTTGACACGGTCAAGGCTGCCAATGACACCCGGGGTCGCTCTGTCCCATTCCCAATTCTACTGCCCATCCCAGGCTCCAACCGCTCGAGTGTCATCATGACAGCAAAACCATTTGAATCTGGCTTAGAACCAACAGAGGGCAAAACAACCCAGAAGAGTAACTTGGAGGAAGATCCAGGGAACATCCAGAAGGCGGATCAACCAGGACCCTCTACAGAGAGCGATTTGGCAACAGCACTTCATCGCCTTAGTCTTCGGCGACAGAACTACTTAAGTGAGAAGCAGTTCTTTGCAGAAGAATGGCAGCGGAAGATCCAAGTTCTGGCTGACCAGAAAGAAGAGGGTAGTGGCTGTGGCACGCCCACAGAGAGCCTGGCCTCCCTCTACACCGACCAATCGGAGATCACAGACCTAAGCAGTGCCAGTTGCCTTCGAGGTTTTATGCCTGAAAAATTACAAATTGTCAAGCCCCTTGAAGGATCACAAACTCTGCATCAATGGCAGCAACTTGCTCAACCAAATTTAGGAACCATTCTTGACCCACGACCAGGTGTCATCACTAAAGGCTTTACCCAGTTGCCCAAGGATGCCATCTATCACCTCTCAGATTTAGAAGAAGATGAAGAGGAGGGTATCACTTTTCAGGTTCAGCAACCTCTTCAAGTGGAACAGAAAACATCAATATCCCAGCCAGTAACAGGAATCTTCCTGCCACCCATGACTTCAGCTGGTGGTCCAGTTACAGTTGCAACCTCAAACCCAGGCAAGTGTCTGTCCTGCACAAACTCGACATTTACATTCACCACCTGTAGGATATTACATCCCTCTGATATCACTCAGGTTACCCCCAGCTCTGGCTTCCCTTCCTTATCCTGTGCAAGCAGTGGTAGCAGTTCATCAAACACAGCAATGAATTCTCCTGCCGTGTCCTACAGGCTCAGCGTTGGTGAATCTATCACTAACCGACGAGATTCCACCATAACCTTCAGCAGCACCGTGAGCTTGGCCAAACTTCTACAGGAGCGAGGCATCTCCGCTAAAGTGTACCACAGCCCAATTTCAGAGAACCCCCTCCTCCAGCCTCTCCCTCGAGGCCTGTCTACCCCTTCCATACCACCAAATTCACCATCTCATTCACCTTGCCCTTCTCCTTTGCCCATGGAGCCTCGAGTGCATCTCTCTGAAAATTTTTTGGCCTCCCGACCAGCAGAAACATTCCTCCAAGAGATGTATGGCCTGAGACCATCCCGAAACCCTCCTGATGTTGGCCAGTTGAAGATGAACTTAGTGGACAGGCTGAAGAGACTGGGGATAGCCAGAGTGATCAAGACCCCCGAGGCCCAGGCAAATGGAAGAAGCCAAAAAGCAGAAAATGGTCTTCAAAGACCAAACTCTGCTGTCTATTTAAATTCAGGGAGCAATTTACTGAGTGGACTGAGGAGGAATCAGAGTCTTCCAGTCATGTTGGGTAGCTTCAGCACCCCAGTTTGCACATCATCCCCCAAAATGGATATCCTGAAGGAGGACTGAAGTTCAGCAGTTGACTGATGTCTTATCAAGTTAGCACATGAAGGAAAGATTTGCACTGTTTATATGTAGTCTTGTCTGAGAGAAAAGGAATGTCGCAGAAGGGTTGTGAATGTAGAAAGGGGAGGGTGAACGAATGGAAACAGGATTAGCATGAGGTCTGTCTGATAACTTGAAAGTATAAATGAATGGGTCATGAGTATTTGGAGGCAAGGGAAAGAAAAAAGGTTGAATGTAGTCCTTCAGTTGGTTTTTCTTGTCTTGAAAATAAAAAGTGACTAGAAAATAAATCCAGTAATATTGAAACACACCAGAAATACTGAACTTCCTAGTACACTTACCTCTGGTGAGCATAAGCAAGAAGGACCTAGGTTAGGAGATGGGATAGAAGAAGGAGCAGCTTGGACCACTGCCTTTAGAAGCTGTTCCAGAAGGTTTCTGGGGTAAACTCGGTCTGTTACTGAGACAACAGTGATATGGCCTTTATGTTGGCCCCTGTTAACGTCTGGTTAAATTACACATCCATCAGAAAGTAAGCTCACTGCATTATCAAACAAGGAATTTCACCTTTTTCGTAAGATCAGAGTAGTGGAGACTCCCTTTTTGCTTTCTGTTTTCAGGACTTTGAACCCCTGGAAGCCCAAACGTCATCCACATTCCTTTTGCATTTGTGATTAATAAGTGTTCAGTTTTTTAATTTGTATTTTTATACAATATCCCCCTCAAACAGTGTAAGTTGGGGATGGGGGTAGGAAAGATTTATTTTAAGAAGGGAAGTGTGGGTACATTGGAACCAAGGAATCTCGTTTTCAGAATATTTATTCTGAATAAATGTAATGACCAAGTTGTATGAACATAGTTACATGTCTTTCAAATTTCCTTGGAGGCTGGAAAGGTTAAACCAGAAGTGCAATCAATAGGAATTTGAGAATGTTGTGTGTTTATGTCTATAAGGGTTTTTGTAAGGAAAGTTGATTGCAAGTAAACTTTTTCCAAAATATGCTATGCATGTTTTTAATGAAGAATGACATGTATTTGCACAAAAATTCTCAGGCACAGTCTAATATTATAAACTGAAGTAAAACCCAGGTGCTTGCTTTGAGATTGTTTTTTAATATAAAATAAAATTAAGACACATTTGCCTTTTTCTTAATATCTAGAATTAGAGAATGACTTTTCATTGGGAAAGTCAAAGCTTTTGTTTTTTCTCTGGGATTCTGTTTTTGTTTTTAACTATGTGAAATGGCATAATAGAGAGAAGCTAGAAGGGGGCTAGTTATTTTTGAAAAGGGGAGGCATGTTACTTGATCTTTTCAGTGTTTCATTAGCAGATTTTTTGCCCCTTTGTTCTGACTTAAAGTGCAAGGCCTTTTCTGAAGTATTCTTGATGGGAGTTTTGCTCCTGGGGCTCCCATCTGTACACCTGTTACAGACCAGAAGAGGGCCTTCTCTCTTCTCGAGCTGCTTCATGTGCTCAAAACACACATGCAGTAGTAAAATGTGTGGGTTTTCTGTGCTTTTTAAAGATCTTTTAATAAGACTTTTCTAAATAAATTTCTCAAAATTAAAAGTGAGAGTGTCCTCTCCCTGTTTTCTCCCCCATGCTCAGTCCTTCTGAAGTCAGAAGACTGTATACATAGATGTTCAGAAAGGATTCCAGCTGGTATGTAAGTGAATGTCAGTGTCCTGAATGTGAACCAGAAGAATTCCTGATGCTTCAATTTCTAAAATATTCCCATTTTAAATGATAATATTTGAGTTTCTACTTCATAAAGTAACTCTGGGGTGCTTATTTTAGACAATTCTTTAAGCTTTTTATTTATTCTCTAAGAAAGTAATCTTCCTATTGCCAGTTGCCGAGAAACATCAGGATCTAGGAAAATGTAGGGCCAGAGAGTAGTACAAAGTGTTAAATTATCAGAGTTTATGTATATTATATAAACAGCTATAAGTTAAGCAAGATTTGGGCATGTTATGTATAATTAGTATATTTGTAAAATAACTGATGCTAAAATGATCGCTTTAGAGGCAGGGCAAGAGCATATTCACAGCCAAATAAACCTGTCTGATTAAAGAAAAGCAGACTTTGGTTCTTGAAAATTAAACTGATGTTGCTGTTCCACCAGAAACACAAGGATTATAAACTGATGCTTGCTTGTCTCTAGAAATGAATCCTGTTTTGAAATTGGGTTTTGTTGTTTTTGAAATTTCCATCTAAAATCATTTTTGAATACTGCCTGAGACTCTCTATTATAATGAAATAGTGTGCAAAGGATAGTAAGAACTGGAGCCTTGTAGCAAGTTCTTTCTTAATTTATCTGTTATGCTTTAGCACTGTTCACATTTTAATTTTCTTATATCCACTGTGTAGGTACTTTAATGCCAGTTTGGAAAACGCCAATCTTTGTTTTTTCTTCTGAAGGCTCTCAATGATTATACCTCAGGTATTTCTGAGTATCCTGTTGCTAGGAGGGATACCTTCCCTGTGAATTCAGAATTAAAAGTTCTCCAGAATTATCATGATCCCAAATCTTATGTAAATAGCTTTACCCATGGGTCTTGGAAAAAAGTTAATGACCATTGTTAAAGTAGTTTTTAAAAAAAATTTTGTACTCTATGTCCTTGATTTGACCTGAATAAACAGACTTTGACAAAGGGAGGCATGTTATCGGCAGCTCACAAGAGCCTGTTCTCTAGAAAAGGTGTATTTTTATACAGTATTCAAAGCCTGTTATTTTTTTCTGGTACTTAACTAGTACTTGTTCAAACATTGACTCTTGACATCTGGAACCAGAGCTCCTGGTGTTCAGTGGCCCACTCCTCTGATGTTGGATGCCTGCAAGCCTGTACCCTGAGCGCAGCACAGCAGAGTCGACACTGAGTGGCCGCTTTGCCTTCACAGCTGTCAGGGAGTGACGTGGGGCCCTCTGTGGCTGCCGGCGAGATACTGTAGTATGATATCTGGGGCTTGACTTTGTCAAACGGCTCTTTGTGCACCTACCTTTGCTTTGTTGAATGTAAATCAGATAATAAACATGAGTATCTTCTTAAATTTTCCTTTGTCTTTCTGTGGTTTTGTCCCAGTTCTTTTCACAGATAATCCTGCATAAAGTCTTTCCTTTCTGTTATGTTGTTTTGGGTACTGAGAACAAGCTCTATTTGCCAAACCAACAATAGTCATGAGTAGTAAACAGATATCACTGTATTTTCTTAGGTTTTTAAAATAGAATAACCATATTGTTTCCTCAGCAAAGCATCAGCAACAAAAAAATAAAACCTAAAGTTGTTGATATGCAGATCCTTAAGACTCAGGAAGTATGAAGCAATTCATTTCTGATGGTCCACAACTGACTACTGATACTTAACTATTTAGAAACTGTTTCCAAGAAATAAAAATTGAAAATTGTTGGATTTT EMBV3_26594 AGTGACCTGAAGGCTGACACCCACCCTTTCGCCCACCCTCTCGAGGACGTGATGCACACT Gene GeneID:100125919|NPDC1:NM_001105489:5_cdna Constitutive 0 NULL GeneID:100125919 11 GENE NPDC1 MGC152274 neural proliferation, differentiation and control, 1 EMBV3_39011 CCAAAGGAATGGTGTGGGTGACTTATTTTGGAGACGAAGGGCAGGGGGTGGTGGAGAAGA Gene BVV0102_131225 + 0 NULL GK000001.2:72045516-72086118 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001108 1 XLOC_000259 NonCoding TCONS_00001108 XLOC_000259 NonCoding NonCoding - 1:72083246-72085736 - TSS538 2490 2 TCONS_00001108_5 127 1 0 0.000595589878726335 3.91574970761907e-05 0.000111493889469 8.33750441834247e-05 5.55184593019972e-05 8.61938834628428e-06 0.000290414748823015 4.09354145008424e-05 6.48090427632452e-05 2.47859918048908e-05 8.27417847345617e-06 1.43601743217067e-06 2.18941295044255e-05 8.69011316559768e-05 7.88146352786384e-06 1.5561363141761e-05 0 1.28220203344639e-30 6.62374907901678e-05 0.000391490272380932 1.77259555365706e-06 0 0 0 5.62220507561659e-05 9.85677417975097e-05 0.000311781602232266 0 2.34549056309709e-05 0 XM_005201520.1 MFI2 PREDICTED: Bos taurus antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 (MFI2), transcript variant 0.0 3101 100.00 0.68995983935743 NM_005929.5 MFI2 Homo sapiens antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 (MFI2), transcript variant 1, 1e-80 306 71.47 0.242570281124498 0 noncoding 0 0 0 0 0.0241665926192939 0.829347089985568 -0.0151537907461315 0.776743806054148 GAGGAGCTGTGGCTTGAATTTAAATAACTCCCCCAAGGGATTAGGGGAGGCAGGGACAGCATCAAGACAGCTGATTGGCCAAACCCGAGCCATGTGGTACAGAGACGTTATCAACTTCTGCTGCCAGGACCCCAGACTTCCTGGCTTCATGGTGATTGGGTGCCGTGCGGAGCCGGGTCCCAGCTCTGTGAGGTGGCCGTGAGGAGGGATGGAGGAAGGGAGGGAGGGAAGAGGCAGGCTTGGGGAAGAATGAAGGGCGGGAGCCCTGGGAGAGGGGAGCACGAAGAACCTCCACTTCCCAAGTGAGTGTGGGGCACCAGCCAAGACCAGCCCACCTGCCACACTTAAGTAAGGCCGGAGAGTGCTCACTGTGAAGACTGACCCCTCCTTCCCTTCCTCCAGTGAGTTAGCAGCCAGCTTGCCAAAGGAATGGTGTGGGTGACTTATTTTGGAGACGAAGGGCAGGGGGTGGTGGAGAAGACTGCACTGCTCTGCACCTGGTTCCCAGAGGAACAGACGCCCAAGAGGCCGAGAGGAAGGAGTCAGCTGGGATGTCTGGGATGGCTGAGGCCAGAGAACCAGTCCATACTAGAGAAGGGAGCTGTGGGCCTCGCTGGATGGAGGCTCGGACTGGTTCCTGACTGAGGTTCTGAGTGGAATCTGTCATTCTGGGAGGCAGGGGGTGACCTGGGGCTTGCAGACCTCTGCCCACCTAAGAAGAAAAAAGTGAACCATCATCAGCAGTTTCTATCAGAATCCAAGCCTCAGCCAGTGCAGGTTGTTTGGCTTTATTTGAAAGAACAAACCAACGTCTTTCATGAGTGCTAACACAGAGGTGGCTCCTTGCTGTCACCTGACAGTCAGAAGCCACCCAGCATTCAGGCAGGTCACACCTTGAGGGGCTCACAGTACAGTGTCACACCCTGGGCAGCACACTGGCCCAGGATGGCCACATGGTAATACACTCCTCACTGCACAAATCTCCCTTTGAAAAATAAAAAAGAAAAAGAAATCAAACAATCATCAAGTCAGAGAAGAATTATTTTGCTCCTTCAGAGAAGAGGGTACACGCTTGGTAGCTGAGGCCGGCTCCTTCTGGCCTCTCACAGTGGGGTGGAGGCCAGGACTCCTCAGGATGGTGTGACCATAGCCAGGACACGGCCAGTGGCCTCCTTCTCCACTGAGGATGGAAGGGATCCATCCCAACGCCCACAGGTGGGGGCGAAGCACTGGGAGCCCAGCCTGTCATCAGCATCCCCGAGGCCCCCGCAGATGAAGATGCAAATAGCTCCAGGCCCACGCGGCTCCCAGCCTGCTGACGAAGGTGGCTTGCTCTCGTTTCTTCTTTTTACTTTTTTAAAGGGAGCAGATTTCAGAGTAAGAGCTGGCAGTTGGGGAACTTTTTCCTGCTTTCCAAACAACCATGACGATAATAGAGACCCTCTCCCAGCAGTTTCCACTGATTTGAAGGGGATGGGGAGGATGGAGCCTTCCTCTGAAATGAGTGGCCCTCGGGCCCAGTCAGAGGATGTCTGGGAGGAAGAGACCCTGTGCTCACACCTGAGGAGCCGGGACTCCCCTCAGCTCCTCGCTGGCCTGAGGCTCCTCTGACAAACAGAATGGCATCTCCCCATCCCCAGCTCTTCAGAGGCACCCCCCACACTTGAGCGCCTGGAGATCACTGGGTAGCCCCGAAGGCTGAACCCTTTAATTTGGAGAAAACCACTGCTGCCAGAGGTACAGGAGCAGCTCCAGAGCGGTGGACATCACAGCAGAGCAGGAGAGGGTAAACTGTGATGGAGCCTAAGAGGAGGAAACTCAGGAGTGGGGATTTCTGCTTGCGGGGCTGAGCCTCAGGACAGAGCCTGGTGCAGCTGAACCACCAAAGGGCAGGGCACACAGATCACACTTTGTTCTGAGGCCTGCCCTTCTTACACAGACAGGTATTTAGGCAAGATTTTAGACCTCCAACCCTGCATCAAGCCCCCTACCTAGTAAAAATTCTGAGAAGCATTTCCGTTGCCCCAGGACCCTTGAGGACTTCATCCCTAGGGTCCAGCCCTGGCCTTCCCAGCCCAGCACAATTAGGGGTCCGGTGGTCCTAGCCATGCCAAGCCGCAGAAGACAAGGACAAAGGGCTGTGAGTGCCCAGAAGCTTTGCCTCCTTGGAGGGCCTGGCTCCAGCCTCATCAGGTACTGCCTCAGTGGACAGACAGACACACAGTATCCTCACGAGGGAGGCTGGAGTCCAGAGACAGACGGAGCGGGGGCTGATGGGAGGTGCTGGGTGCGGTGTCCATTCCCCAGAGGAGGAGGTGGTAACTGGCAGGGAGGGGCCGGCAGGCCTGTCATCTCACCAGGCCCCCCTGGGCGGCTCAGCAGGGCGAGTTCCAGCAGAGAGGGCCATGTGGGAAGCTCAGGTTCAGCCTGTTTCCTTGGCAACCGGTCTTTTCCAAACCCGAGGCTGGTGAGGATCTGCGTGGTGGGAGC TCONS_00003950 r 3' 383 TCONS_00003950 r 3' 2872 EMBV3_22376 TCCAGGTGTCTATCTGCTGCAAGGAGGACAGTATTGGCCTCCTCATCACAGGCTGAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31543 ACTGCAAAGTTTTACACCTGTGAACTATGTCATATAGGACAGGGATTTATGTAGTTTAAC Gene GeneID:538617|TRIM2:NM_001083735:22_cdna Constitutive 2 NULL GeneID:538617 17 GENE TRIM2 MGC137696 tripartite motif-containing 2 EMBV3_14556 TTGGCCGCCTCGATGCAGGAGGACGAACAGTTACATTATTGAACAAGGAGTATGTTATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30340 CGTGCAGTTCAACAAGGTGCACGGCTTCTACATCGAGGTCACGCAGGGCCAGATCGACAA Gene GeneID:100301289|LOC100301289:XM_002683907:2_cdna Constitutive 0 NULL GeneID:100301289 Un GENE LOC100301289 NULL hypothetical protein LOC100301289 EMBV3_25325 TGTGAACTTTGCTAAACAGCAGAATGAAACTTACGACCTCCCTTTGCACCCTCGAGCTGC Gene GeneID:281584|ABCA4:NM_174221:111_cdna UTR3_Alt 2 NULL GeneID:281584 3 GENE ABCA4 NULL ATP-binding cassette, sub-family A (ABC1), member 4 EMBV3_37125 GACAGCTGCTATTGTGTGGAGAAAGATCGGCAGAGTGGAGAAGTCCTGAAGGTGAACATG Gene GeneID:506305|RARS:NM_001105338:4_cdna Constitutive 0 NULL GeneID:506305 7 GENE RARS NULL arginyl-tRNA synthetase EMBV3_16705 GATGAACGGAAGCTGATCCAGTTTGGGCTTTTGAAGTACCTCATGCGGCGAGTACAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36488 GAGTTCATGCTTATGAATTCCCGACTTCAGGTGAAGCCGAGAACATACTGGAAACAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13542 ACAGCCGGCGAGGACGCCGACGGCAGCAGGAGCCAAGCCCTCGGAGCCTGCCTAGTGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10888 CAGGGGGACCTCTCAAAGGCTCTTCACTGCCACGCTTCTGCCAGCACTTTATTAGTCATA Gene GeneID:509875|LOC509875:XM_002692047:28_cdna Constitutive 0 NULL GeneID:509875 13 GENE LOC509875 NULL similar to Coiled-coil domain-containing protein 3 EMBV3_02123 CAAAGATTGCCTTTGCCACGGACCCGAGAGAGAACAAGAAGACACCGAAGAATTCGCCTG Gene GeneID:614529|LRRC27:XM_002698605:32_cdna Constitutive 0 NULL GeneID:614529 26 GENE LRRC27 NULL leucine rich repeat containing 27 EMBV3_27836 CTACCAGTCATAAAGCTACAGTTTTTGGTTGTTGAGACTGATTGGCCTTGGGCTGAAGGG Gene GeneID:506968|RANBP3L:XM_002696377:92_cdna Constitutive 0 NULL GeneID:506968 20 GENE RANBP3L H20C5ORF33 RAN binding protein 3-like EMBV3_27534 CCTGGGGAAAGGATGTACTCAAACTCTAGCACCCTCTAGCCATGTCCCACTTAATCTGTG Gene BVT0102_144057 + 0 NULL GK000016.2:69271400-69289890 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02279 CAGGAACTGAGAACAGTCATCCAGTGGGTCAGAGATCAATTAACTCCTGTTCGGTTCAAC Gene GeneID:100295414|LOC100295414:XM_002697480:139_cdna Constitutive 0 NULL GeneID:100295414 23 GENE LOC100295414 NULL hypothetical protein LOC100295414 EMBV3_07236 ACTCCAAATCAGTCAAGCAGATGGAACAGCCAGCAGCTAAAAGGGAAGTGCCTGATGCCG Gene BVT0101_077166 - 1 EMBV3_37752 GK000013.2:57596871-57655458 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39099 TCCTCCGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGAGGTCGGGGGCCTGGTTCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00608 CTGCCACTGAAGGAAAAAGCCTTGCCCTCTGAAGAAGCAGGAGGTGTAGTGCCTTCTAAA Gene GeneID:280830|IVL:NM_001105320:7_cdna Constitutive 0 NULL GeneID:280830 3 GENE IVL MGC143178 involucrin EMBV3_38752 TCTGGTGTAAGGACAACACTGCCCACGACTACAGCAGGGACCAGAACAACCTCAAATCCT Gene GeneID:751808|LOC751808:XM_002687826:135_cdna Constitutive 0 NULL GeneID:751808 5 GENE LOC751808 NULL WC1 isolate CH149 EMBV3_18976 GGCAAAAATGGCAGATACGTGGGGATGTGTTACGTGATGTGGCTGAGATTGTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_08345 GGATCTCTGCCAGGCAAGGCTGTCTTAGAGTGCTGACTGGTCACTTGAAGCTTTGCTCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29749 CGAGATCTAGCCTTCCGGTCCTCTCCGCTGCAGGCTTATCAACTGGTGTATATTTTTATA Gene GeneID:532663|ENPP2:NM_001080293:58_cdna Constitutive 0 NULL GeneID:532663 14 GENE ENPP2 MGC142749 ectonucleotide pyrophosphatase/phosphodiesterase 2 EMBV3_31210 ACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATT Gene BVT0102_078187 + 0 NULL GK000008.2:13692828-15159559 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00252353 TCONS_00064619 TCONS_00200529 TCONS_00249011 TCONS_00224113 TCONS_00178107 TCONS_00059708 TCONS_00224475 TCONS_00064812 TCONS_00250720 TCONS_00198813 TCONS_00250726 TCONS_00039951 TCONS_00136620 TCONS_00200932 TCONS_00020023 TCONS_00129573 TCONS_00224484 TCONS_00116172 TCONS_00218552 TCONS_00023614 TCONS_00224483 TCONS_00088088 TCONS_00180345 23 XLOC_131641 XLOC_155294 XLOC_039343 XLOC_122181 XLOC_151954 XLOC_137409 XLOC_107880 XLOC_036490 XLOC_137538 XLOC_039536 XLOC_153663 XLOC_120466 XLOC_153669 XLOC_023768 XLOC_082831 XLOC_122582 XLOC_010701 XLOC_078286 XLOC_070341 XLOC_131872 XLOC_014281 XLOC_052875 XLOC_110113 Coding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_39154 CACTTCCCCTGTATTTGATGATAAGGTTGCTGGGATACAAAAACATTTGCTGTGATTTCT Gene GeneID:282184|CLDN16:NM_174519:36_cdna Constitutive 2 NULL GeneID:282184 1 GENE CLDN16 NULL claudin 16 EMBV3_43366 CAACGACTTTGTCATGCTGAAAGGTTGCATCGCGGGCACCAAGAAGCGGGTCATCACATT Gene GeneID:618440|RPL3L:NM_001035501:303_cdna Constitutive 0 NULL GeneID:618440 25 GENE RPL3L MGC128622 ribosomal protein L3-like EMBV3_15224 CACTAACAGGAGTCTGGAGAACTAAGAGTTGGTCGGTTTGGAAGGACAGAGACTGGGTAG Gene BVV0102_349939 + 0 NULL GK000017.2:73924542-73934693 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081928 1 XLOC_050805 NonCoding TCONS_00081928 XLOC_050805 NonCoding NonCoding - 17:73930404-73931582 - TSS61868 1178 2 TCONS_00081928_2 39 0.16383701188455 1 0 0.000300295577686413 0 4.7134213691702e-05 4.22961440571043e-05 4.19114783798959e-05 6.07310074285184e-06 4.95051942725151e-06 3.51468174858078e-05 0.00064969625157642 0 1.9432814562223e-06 0 0 0 0 0.000605358973673262 0 0 0.000188708764452705 0.000537221420047722 0 3.14968369769649e-05 0.00010124164020798 0.00029886016045216 4.70525743926899e-05 5.38278956940547e-05 6.46594881704989e-05 2.44613529488897e-05 2.88474049245017e-05 1.0207545739985e-05 XM_005218318.1 LOC101902613 PREDICTED: Bos taurus DNA topoisomerase 3-beta-1-like (LOC101902613), mRNA. 0.0 2125 100.00 0.999151103565365 0 noncoding 0 0 0 0 -0.21991536579239 0.0941289100097868 0.0119639317171831 0.857134784018303 GTGTGGGGGCCCGCATGTGACCCTGGCACCCCCAGGCCTGTTCCCCTTCCAGTTCTCAAACAGGTGTCCCCTCAGGCAGAGGTGGGCGGCAGCAGACGGCAGGGTCAGGGGCCACACCACCTGCAGGACACAGGGCACCTGCCCGCTTCCCGTGCCCACTCCACCTAAGGGCGCCCCCTCAGCCCACCACAGCTCACCTTGGGACTTTGCCCCCTGCCAGGCCTCCGCCTGAGGGGCCCCCGTGAAACGCCTCTGCAAGCCTGCACGCGGGGCAGGTTGGAGCTGTGGTGCCCAGACACGGACCGCTACCTGGGTCGTAGGTTCGCCCGGGAGGCTGGAACTCCGGCAGGGTGGGCCAGGCCACGTGGGAGGCTCCTTTCCCAAGGGTAGAGCCGGGGCTGGAGCTGAGGTGGGCGGGAACTGGGCGGGAGGAGCTGACACTAGCCACAGGGCCGGTCAGCTCCTGGGCGTGGGGTTGGCCCGGTGCCCACTGGAGGAGGCACACTCCCAGCCAGGCGGCATGCCTTCCCCGCCACCTCCTGGTGCTGGCCTCGGGGCATCAGTGCTCTGAGGGGTCTCGTGGGGGCCCGCCCGGGAGGGCCCGTGGGATGTCAGCTGTCCCAAGAGCCCCTCACCCACACAGCGGTCCTCAAACTTCAGTTCACACTTGTTCTGGGTACACTTTGGGAAACACTGAGGCAGGGTCTCACAACAGCCCTGGAGGGTAGGTTGGCACCTATTGATCCCCTTTTTCCTGATATGGAAACTGGATATGGGACAGCTAAGGAACAACTTGAAGGTCACAGGTCATAAGCACTTAACCACAGGCCTTGCTGGGGTCACCATGCTGACCTGCAGGCGGGGTCGGGCTGCAGGATCTAGGAAGGCCTGAGGAGAAGGGCCCCACCCTGCCTTCTCTGCCCAGATGCCCACTGCCTTCTAGATCCACCCCCTACCCAGTCTCTGTCCTTCCAAACCGACCAACTCTTAGTTCTCCAGACTCCTGTTAGTGAATCTTAGTTCCTGGGCCAGACACAGGCCGTGTGCCCACCTGGAGGTCAGGTGGGCAGGGCCCCAGTGGGGCTTTGGAGGGCTCTTCCAAAAAAGTTTATATTATGCTTTACGACTGCATTGATATAAAGATGAACATATTATATATTAAAACATTTTCTTTGACC TCONS_00076359 . 5' 6516 TCONS_00076359 . 5' 6516 EMBV3_29506 AGGGGTGTGGGTTACCCTGTACACATGATCCAGTCCGTGACTACCAGCCAACCTGAATAA Gene GeneID:527903|VSTM2L:NM_001077976:1171_cdna Constitutive 0 NULL GeneID:527903 13 GENE VSTM2L C20orf102 V-set and transmembrane domain containing 2 like EMBV3_19051 CAGATGCTTCTTCCCTCAAGAGCAGAGGATTCTTTGTTCTAGGAACTACATCCTTAATCT Gene BVT0102_361202 - 1 EMBV3_01499 GK000010.2:38151657-38159316 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020622 1 XLOC_011297 NonCoding TCONS_00020622 XLOC_011297 NonCoding NonCoding - 10:38152120-38157107 - TSS14512 4987 4 TCONS_00020622_4 77 1 0 0 0 0 1.18939929664985e-07 0 0 8.35273342658173e-08 3.55807473438453e-06 1.26571181995657e-05 2.80514821273671e-05 4.1312871887498e-05 4.23031639808649e-05 8.0549166628617e-06 3.49002606327573e-05 2.1643579453328e-05 0.000799708175746344 9.65442271440698e-05 0.000286782060517213 0 0 0 0.000485088867686678 0.000209713679770838 0.000416847196500104 0 1.20085160512356e-05 0 4.42990390990377e-05 3.5044283653693e-05 0.000270050304602881 XM_005211595.1 TTBK2 PREDICTED: Bos taurus tau tubulin kinase 2 (TTBK2), transcript 0.0 7514 100.00 0.835171445758973 XM_005254171.1 TTBK2 PREDICTED: Homo sapiens tau tubulin kinase 2 (TTBK2), transcript 0.0 1746 75.00 0.529977942650892 0 noncoding CCTTGCCTTTCTCAAAAGCTGAGTTTTCAATCCCCTGCCCACTCGTTTTCCAGCACCCACCAACAACTGATCGATCATTTAAGACTTTAAGACGGAGGGGCTTTTTAGGATCCTCAGCCCACAACCCTTAAAAGTGCCGCCACCCTGCACACAGAATCGCCGTCTTTATTATCCCTTATACGTTACACAAGGTTAATAGTTCAGCTACTTTGCAGTTATTAATAGGCATACATATGATTAGTTTCTGGTAGCTTGTTATTTCTTAATTTTTTTTATTTCAAAAAATACGAGAATCACCTCTTTGGATGTTGCTGCTCACTGAGAACTCAAGAAAGGGAAACCGGGCTGAGAAAAACAAATGGCACTAATATTTCAGGCCAAACCAAATCAGGAAGGGTGAAGCAGTGCCCGCATGAAAGCCTCCTGAGAGGTCCCTTGGTTCAAAGGACAAGGAAAAAGAGGGGATGCTGGAAAGCAGAAATCACTCCAGTGATACAGGGACGTTTCCTGCAGAGAAGGGAAAAATACCTCCCAACAGCGATACAATGATGGGTTGAAACAGAGCTTTTAACACTTTCAGTTTTATTACATGGGGAACCCTCTCCTCACATCTCTGAACCCTGGTTGTTGTCTGCAGGGGAAATTGAATACCTAGTTTCTATTCCAGCGCTTCTTTTTCTAGGTCACTTCTGGATGTGGTACTGCATTTATAGAACACTTTCTGCTCCCTGTTGATCCTGTGACCTCCGGTGCATTCAATAACCTTTAAATTAGAAAAATATTTCTCACCTCTGAAATCCAAACCATCACACAAATAGAACTAGAGTTTGCATGCGGAATGAATATTTTATTACTAGATTATAAAAATAAAATACAAAATAATTTTAAAACAGAACTTAAAACACTGTACAAAGCTTTAATATGATACAAATGGGAAAATTAAATAAATAATTACACTTTTATGTACAGATGGCCTATACAAAAGCACTCATGTTTCTGCCAATACTCTATGTCCTTGGTTGCCTGAGCAAAAATGCATAAAGAGGGCTGCTTGGAGGGGAAAGGGATACAATACAATACCTTTGGAGGTATTTCAAAGAGCAGTTTCTCATCAGTGATTTCATGAAGAGAAAAAAGGGAGAAAACTATGGAACTGTTAAATTACTCTAACTTGTCTTACTCGATGAGTGAATTCTTCTGGTTTGTGGTTCCATCTGATTTAAAAAATGCCAGTAGTTAGAAACTTTCAAGATTTACATCTAATTCAAAATTAGGTGCTTCTCAACTCTCTCTTTTTTCCTAAAAGCTGTAAACTTGTAAGTAAATGACCCAATGACATCAGCACTTGGTTATTTTAGGAAAGGAGTCAGGAGGGGAACCAGGAACTGTGCATGAGCAGTGAGGAAGCGTGAGCCTGGGTCATCTGTTTTTTTCGTTACTCAGTTCACAAGTTCACACAATCCAATTTCAGAGCCCCAGTGGTACACGTTGTATTTCCTTTAGCTTCCTCTATTTGTATTTCTGAATTAGTGAACTAATTTATCTAACTGATGAATAGTTTAAAAAGAAAAAAATCCCAAGGGCTTTCCCTTCCCTGTGTTGATCCCTAAAATATACTCTGGTAGGTCTGTTTATCCCTTGTGGATGAGAAGAACACCCAGACAGACCCCAGGGATGCTGAAGTTCCATATAGGAATTTTTAAGGATTTGAACTGTATATTTTAAGGGGTGGGGGGGGAGGAATATATGGCAGGGGTAGTCTATATAAAAATTAGATTTACCCAGTGTTTTTAACTTGGTGAGTGAACACTTATGTACACAACATGAAACAATATTAAACTACTGAAAAGAAAGAGAAAATTTCCTATCATTAGTGTGTAAAATTATGTCAGCAAGTTCTATAGTCACATGGGCTCAAAGGTCTGCCTCATGGAATCCCATTCTCTCAGTCAAGGAACCCAGAATCCCTGACCCAGAGCATCCATACTGTCACTTCAATTAAAGAGGCAGATCCTGTTAAAGTTTCACAGGGCAATGAAGAAAAAGGCTTCACCTCCTTTACATGTCTCCTTAAGACCAAGAATCCAGCAAAATCTATGGAAATAATCATCAAATCATTACTGAGTAAAGGTTTTTACTTGGCTCTTTAGTGTTTTAAGATTGTGGATCAGGTCAAGGTGACTTTGATCTTGTCACATACTCTGATTCTTGGATCTGCTTAAGGGAAGTAATTAAACATCAAGCTTATGTTAGTTTTAAAATTTGGAACAGATAACCACAACTGAACTAGAAAATATACTGATGGGTCAAGAATATAATTTCAAGAATTTGAGGTGTGTAGCATCCAAATTTCCCTTTAAATCAATAGGGGGATCCTTGTCCCATTTGCTGGAGTTACCTAAGAACTATATGAATTCCCCATTTATTGCCTGCAGTTCTCCCTAGCAGTGCTGGCAAGAGATTCTGCAGTATCCTGAGTCTAACTGGCTTAAATTTCTCATGATTCCAGAGAGACAGCCAAACTCTGGAGAATATCCAATGATATGTTTCCACACTACTCCCACATCCTTGAATTCTATACCAGAGTTCATCCCACTGGATGAAGTGGGACGTCCTAACAACCACCTGGGGTTTCCCATGAACTACTCTTTCTGTATGTCTGTGGATTAGAACTGCCTCTTGTTCCCATCTCTAAGTTAAGGTCTAAATATGCACCTGTGATTCCTGAACTTGGGTAAATATTGACATGTGAGGACTACCACAGTGGTTACATGCCTTAATCCTGAATACTTTGTTAGAACACAGATGATGTTCTGCAAACAACTGTCTATAGTACCAAACTCAAGAAAATTAAACACAGTTGTCATCAACCATTCTATCTCCTCAGTGATACAGGTGCTGAAATCTCTCTCCTTTAGGCAAAGTCCCAACACATGTGTGGTAAATACATATAAACAGAAATGGGCAGATTTTAAAACAATGAATGCATACAACTTCATTCCAAAACACATAAACATGACAAAAGAAATAGTTCCCTGACATATGTCACGCTTTAATATCAGGAATGAAAAAGTTTTAAAATGTGAAAATTCTGACCTTCAAGGCTAAATCTAGACTTATCTACAAATAAATGTGTTTTCAAGTAGCCAAAGTAAGATGCATTTTTCCCTTAAGCCACTAAATTCTGAATTCTAGATCCTTTTTCTCCTATCACCAATTCTAATGTTAGATTAAGAATGTAGTTCCTAGAACAAAGAATCCTCTGCTCTTGAGGGAAGAAGCATCTGTTTTTAATTCAAAGCTATTGGATATATAAAAACTAGTTATGGTTTTAACTATCTGTGTCTGGGTTTATAAAACATGCACCAACATTTTCCTTTGTCAATTAAATATAACCATAGAAACATTCACATAAAAATCTGTGGCCTGGAAGGAATCTCTGATGATTACAGAAGAACCTCAAGTTCCTGTAGTGGCTAAGAGTGACACAGAGAGACACTGCACCCTAGTCCACTGGATTCGTAAGCAGCTGAGATTTGTTTAGTGTTTCAAAAGCAAATACAGAGTGGATAATGGCAACAGTGGGTCTCAATTACCATTTTGCTAGTTATTTAGGACTTGATTAACTTGGCAACTTAAAAAATAAGTTTCACTTCACAACATGCAACTTAAAAACCAGAATGTAACTATGCTGCTGTCAGCAAGGCGGGCTTGCACACCACAGCTGAGAGTAACAGTGTCTATTTAAGACTCACCATTCAAGCGTGTTTATAATCTGTGCTTTACAGTTAAATTTGCTATGACCCAATTTTCATTCTTTGTTCACTATACGTTAGAGTTAAATGCCTTTAAGCTGTGCAAAAGACTGCTGTGTGGAATTTTAATATTTCAAACAATCTATACACCCTGGAGATTTGGCAGCATAATTTAGGAGTAAGCTACCTAAAGAGACTGAGCTATGGCTAATTTCATCTTCTGCTCCACCCAAGTAATTCCAGAGACTGGACAAGGGAGGGTAAGGGCAAGTGTGACAAGGTAACTAACCATTTTGTTGTGATAGGAGAATCTAGGAGGCACTTGGTTTTCAAAAGGTAATTTTAACTTTTTCCCCATACTACTCTTAATATAGTTTGGCTTGACTTTAAAGAATAGCCAAGTCCCTCATTTTAGAATAACCAAACTGGTTCAGAATTACTTGGATGACCTATGTCACTGAAGTGTGAAATATGCCACCACTAAAAAAAATAATAAATTTAAAAAGAACAATAACAACAAAACCCAATTCATTTTCTGTATCATACAGAAATAAAAACAAAAACCCTTGTGCCAAAAGTGCTTTGCTCAGGGCTGCCAACTTCTCTTTTTGGCCCAAGACATCTAAAACCATAGAGGTTTTTTTTTTTTTTTTTTTTTTAAAAAGCAGAGTAAATCTCTATACAAGACAGTCCTTTTAAGTGGATATATTGATACATGAGATATAATTAATCTTTTTTGAAAGTATCCAAGCAGAAATATCTTTGGTTAACTCTTTTTCTCTATGTGCAAAATAAAACATTCTTACACAGCAAAGTTTTCTCTCTGGATCTTGAGTTTGTCAGTGCCATTTAGAAAAAGGGGCAACACAGTGGAAAAGTTGGGAGAAAAACGGAAGGACTCAAGAGAGAGAGAAAACATTCAGCTGCCATGTTGTCATCACTATCAGGTTTAACTAGCAGAGACGTGCCCGTAAGAAGTGAAATAGCATACTTCATACTGTTTGCAGCCTCATCAGTTTTTCAAATAGTTACCACAAGCACATTTCTGATTAGAGGGGTCAGGATTTAAAGCTGGCTACTTTTAGCACAATTTTGCTAATACAACAGGAAAAACAAGATAATTTCTTAATTACAGATTACTTCTTACCTCCACCCTGCCCCTGACAAAGTGAGATGAAAAGAGGAAAGCAGAATGGTAATTTTTTAAGAGATTAAAAAAAAAATCTATTTAT TCONS_00016902 TCONS_00016903 TCONS_00016904 TCONS_00016905 TCONS_00016906 TCONS_00016907 TCONS_00016908 . 3' 437 TCONS_00016902 TCONS_00016903 TCONS_00016904 TCONS_00016905 TCONS_00016906 TCONS_00016907 TCONS_00016908 . 3' 5423 EMBV3_40284 AAGCAGCACAGTGATGGGCACCAGCTTTCCGAGGAATAGCAGGGGTGGACGCAGACTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25745 TTCAGCCTACCTGAAAACCAAGGGAGTGTGCAAGGAAGTGTTCCAGCTCAAGGGTGGCAT Gene GeneID:616726|TSTD2:XM_002689731:88_cdna Constitutive 1 NULL GeneID:616726 8 GENE TSTD2 NULL thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 EMBV3_40274 CTTGTTCATGTGCGAGAAGTGTATGTAGATCCCAAATCCTCCAGCTGCACCTCTGCGATG Gene GeneID:540818|GABPB1:NM_001076242:145_cdna Constitutive 1 NULL GeneID:540818 3 GENE GABPB1 GABP2 GABPB2 GA binding protein transcription factor, beta subunit 1 EMBV3_26206 AAGCAGGTCGTGTCAGGGATGAACTATTTCTTGGACGTGGAGCTTGGCCGGACTACATGT Gene GeneID:281102|CST3:NM_174029:2_cdna Constitutive 0 NULL GeneID:281102 13 GENE CST3 MGC133662 cystatin C EMBV3_15523 GGTCTCAGGAGATAGTAACGTGGCCTGGAGTTTTGAGCTCTTGGTTAAAAGGGAATGGCC Gene BVT0102_229755 + 0 NULL GK000022.2:54723223-54785902 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131590 1 XLOC_080295 NonCoding TCONS_00131590 XLOC_080295 NonCoding NonCoding - 22:54770572-54773886 - TSS98457 3314 2 TCONS_00131590_2 170 0.30084490042245 1 0 0.000513190888501787 0.000127348811327981 0.000161958896399384 2.00462440417354e-05 0.000248796311935575 1.51112722288517e-05 9.50248368727881e-05 7.13907406504274e-06 7.61871551403117e-05 9.18747251802837e-05 1.58875342192801e-05 0.000317754756837634 7.79225841597029e-06 2.12914634096055e-05 0 0.00397688203720999 0.00164820536614966 0.00383859132385631 0.000129829742319383 0.000266912780190275 1.28244323219195e-05 0.0011666167336744 0.000362643414521148 0.00132538622159645 0.000756822989273315 0.000312517804969359 0.000401336494084728 6.95607572776656e-05 1.46487721996827e-06 2.17703886105596e-05 XM_612363.6 CDCP1 PREDICTED: Bos taurus CUB domain containing protein 1 (CDCP1), 0.0 5977 100.00 0.999698249849125 XM_005265404.1 CDCP1 PREDICTED: Homo sapiens CUB domain containing protein 1 (CDCP1), 2e-137 495 72.00 0.286964393482197 0 noncoding 0 0 0 0 -0.0135797540586932 0.910018833653857 0.0469119933051188 0.453481114282882 CTTCTGAGTCTGAGAGCGAGCCGTACACCTTCTCCCACCCCAAGGACGGGAAGGTCAGCAACAGAAGCACAGACACTCCTCTGCTGGACGCCCACGAGCCCACGGAGCCCGGGGAATAACAGGGACCCACCCAAAGACTTGGCATACGGCAGGGCACTGAGAAGCCCTTTAGGGTTCCCACCCAGATATCCTGAAGACAAGGAATTGTGTGGAAGGACAAAAGGAGGTTTTTCCTGAATGCCACCAACTTCTGATTTCCACGTGGACTCACTCCGCCGCTGAGACGTTGAACATGATGATTTGTGATCCGGATGCTATCATCTCCGGGCATGTCCTTTAAACTCAGGTTGGGTTGTAACCAGCCCATAATGAGAGGGAAGCGGCTGAATCACCCAGGACAGGGCTGCAGCGAGCCCCACATTTGGGTTTAGACCTCTTCAGGTTGACAGTGTTGATCCCTGGGTCCTTGCTCTCACTGGGGAGCCCCTGGATGAAAATGTCAGTGTGCTTTTTTAACTATTATTATTTATTGGGTGGTCCTGGGTATTTAAGAGGTCAAATGGGTTGCCATGCAGCTCGTCTCACCAGACATAGTGGCAGCTCATGCTCACTGATTAGATGGCTGGGTTTTGACTTCTGCCCACCACTAGATAAACATGTGCCTGTCCTCTGGGAGGTGGGAATAATTTGCAGTCTCTCCAGCCGGAAAACAGTGTGTGTGTGTTTGAGGGCACTGACGCACATCTGCTTTGAGGAGAGACTTGCTGGTTGTCTTGCTCTGCATGTGGTTCTCTCGCTGCAAAAATCCGTCTTGAGTCGCATTGTTGCCCTTGGATCTAGGAATAAGAGAAATGTCCTGGAATTGCGGTGTGTGGCTCCACCCAGCTGCAGCAACGCTTTAACATTTAAACAGAAACGTAGAGAGTATTTTCATCCTCTAGAAGCGTTGAAAGAGGATTTCCGTGGTGGCTCAGTGGTGGGGAGTCTGTCTGCCAGTGCATGAGACACGGGTTTGATCCCTGATCTCTGAAGATCGCACATGCCTCAGGTCCGCCGAGCCCGTGTGCCACCATCGAGCCAGCACTCTAGAAGCCGGGGGACGCAACTCCTGCACACTACAGCAACCAGAAAAGCCCGAGCACCGCAACGAGAGAAAAGCCTGCCCAGCAACAAAGACCCAGCACAGCCAAAAAGATATAAGCAAACAAAAGCATACACTAGAAAAATAACATTGAAAGGTACAGGAGAGAGTGGCCACTCGTATTAGTTGCTAAAGCTACTGCAACAAATTACCGCACGCATGGAGGCTTGAAACAACACGCGTTTCCTATCTGACTGTTCTGGAGATCAGAAGTGCAAAACGGGTTTCCCTGAGCTAAAATCCGCGTGTCAGCAGAGCTGTGCTCCTTCTGGGGGCTCCAGGGGCGAATCCGTCTCCTTGCCTTTTCCAGCTCATAGCAGCCTCTCACATTCCTTGCCTCCAATCATGGCATTGTGACACTGCTGTTGTTCAGTCACTCAGTGGTGCCCAACTCTTCGCAACCCCATGGACTGCAGCACACCAGGCTCTTCTGGCCTCCACTCTCTCCCACAGCTTGCATCTCTCTTCTACTGACAAGGACCTTTCACTTACAAACCTCACCCAGGTAATCCAGGGTCATCTCCCCGTCACAGGATCTTTCATTACACTGAAGATCCCCTTTGCCCTGTAAGGTAACATATCCATAGGTTCCGGGCATTAGCACATGGACCTTTCTCCTGCCTACCACACTCTACCCGCCCCAGGAGAGACTACAGAATGTTCCAGCCTACAGATGTGTTTTGTTAGGCCTGCAGCATCTTTTTAAAGAATTACTCACCAACATTTGAAATGATAAAATGTTTACATAACAAATCTGGATCGGAAGATCTGGCCATGCTGGGACTTGCGTGCTCATCAGAAAATAGCCGTCTGGAGTTGACACACAGCTGCTCTCTAGAGGGGGCGCCTGATTCACCCATTCCCTGCAGGCCACACCTCTCCCTATCGCCTCCCACAGAGGCTGAGGGTCTGTTGCTGTGGGTGAGTGCCCTTCAGGGCTGCTTCTCCCATAATGGAAAGTTCAGGACTCATACCTCAAGTGACATAAAAAGACAAGTCTTGAGGTTGATGTGTGCTTCAGGAAAGTTGTTTTTTCACACCCAGCCCACATCCTTCATTTATACTAATTACCAGCCCAGCTCCTACAGGCGTTTGCCTTCGTGGCCCCTGCTCTCGTCCAGGAGGAAAAGGATTGTGTTATGGCTTGTCAGCACAGTCCCAAGGTCAATATTTCTGTGGCAAAACCTCCTTTAAAAAATAGATGCGGGTTGTCAAATTCAGTGGCTTCACCTTGGAAATGCACTGTCTGGACTTGTCCCCTTGCTACTTTGCCTCCATGAAAAGTTTTGCAATCATCTAAATGCTGTGAGGTCCAAGGTCTCTTGAATTCTTTCCAGAAAGAGGAATATTATTTTTATTGTGTCTTTGGTGCTCCCTGTGACGCTTTTACTCTGAAAGGCTGGCTCTGCCCACGGACCCTCATTGTCTTGGCCTGAGATGCTGGCAAAGCCCCTCCAGGAAGGACCAGAGGAGGTCTGTGGCTCCTTTCCTTTCACTGAAATTGTATCACTATTTAAAACCATCACTGGGGCCCCGCTCCTCCATTCTCTGCCTTCTCCGACCTCTTGGCCTCTTCTGAGGGTCACTCAGCGCTCGGAATTCCACCCCCAAAGCGTGGCTGTCCTCACACACATCATCTTTACCTGCAGGGGCCCCACGTGGCCATTCCCTTTTAACCAAGAGCTCAAAACTCCAGGCCACGTTACTATCTCCTGAGACCTCAAGTCAATCTCCAAAAACATGCCTCCTTGAAGGGGCCAGACCGATATACCCTTGGCTCTTCCCTTTAAAGCTCAGGCCCCATTTCTGTAACATATTTCAGGGTCACTGAAAACCAAACACATTTGTCAAAGCCTAGCTGGTGCCAGCAGATTGCCCTCCAGGCCACGTCTGCCCTCGCCCTCAAGCCCATCCTCTGACGAAGCCTGGCTCGGGCAGGACTGATTAATGCTGCAGCCATTTTGCAAGGTTGGGTGGGGCCGGCGGGGGGGGGCGGCGGGGGGGTTGGTCTCAAGGAAGAGCCAGGGGGAAAAGCAGAAGTCTATGGGACATAACCTTGGTGAGGGTTAGGACAGATTCGTGGGATCTGCAATGCTTAACTCAAAATAATTTATTTGTTGTAGATACTTTTTAGGCAGCATTTTGTTCATTTCCTATACTTTTTTAAATAAAC TCONS_00127463 . 3' 61 TCONS_00127463 . 3' 3374 EMBV3_20017 GACTGTCATCTGGGTGGATCCCGTCAACATCATCGCAGCTACCTATGACATCCTGATTGA Gene GeneID:541295|XYLT1:XM_002698037:256_cdna Constitutive 0 NULL GeneID:541295 25 GENE XYLT1 NULL xylosyltransferase I EMBV3_09047 GTTGACTGCTTTTCCTAGTAGCTGATCTGAGAACGTGGAATGCAAGGAGATAACACTGCC Gene BVT0102_030920 + 0 NULL GK000027.2:15022819-15232458 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155991 1 XLOC_094900 Coding TCONS_00155991 XLOC_094900 NonCoding Coding SORBS2 27:15001214-15057101 j TSS116621 598 2 TCONS_00155991_2 43 3 0.989353326414487 0 0 1.54749209767897e-05 0 0 0 1.9504064797804e-05 0.000138471384289542 6.59710974337128e-05 0 0 7.50599645257399e-38 0 0 0 0.000613208735152936 0 0 3.59744765090574e-05 0 0 3.98269856332936e-32 0 4.6472707443273e-05 0 7.06902478885817e-05 9.79790454577408e-06 0 0 0 NM_001079787.1 SORBS2 Bos taurus sorbin and SH3 domain containing 2 (SORBS2), mRNA. 2e-26 123 100.00 0.112040133779264 NM_001145670.1 SORBS2 Homo sapiens sorbin and SH3 domain containing 2 (SORBS2), 5e-179 630 84.91 0.948160535117057 0 noncoding 0 0 0 0 -0.103601653702283 0.515699650346727 NA NA ATGCCTGCCAGCTGCCGTTTGGACAAGCTGTTGACTGCTTTTCCTAGTAGCTGATCTGAGAACGTGGAATGCAAGGAGATAACACTGCCTATCTGCTATCACACAGCAGGAAAGGTTTTTGTCTTGGGAAGGCTCGCCTGGCCTGCAGTGTTATCTCGGCAGCTCTCTAGCTGCTTACCCTGAAAACTACTGACCCCGCAGGAGGTGTTTCCGGCTGCAAACACCGGTCCGCTGCGTGGCTGTTGCGTATGAGTGGCAGGTCTGAAGAAGCAGGTGTGTGCTCCGATGGGCACTGGACTGTAACGCGGGCGGACGCGCTCGGGTTTACCTGCTTCCTGTTAACAGATTGTTGGCTCAGAGAGCATCTGCCTGCACACTGAGGCCGAGGCTGAGAAGGAGGGTCCCCGTGTAGCCACTTGACTGACAGAGACACTTTGATTGGACTTAATCTTAAACCTCTGGAGTTCAAGACCTTTTAAAAAGGGCTAAATAAACAACCTCCACATGTAAAAGGCCACTGACTCCTACTTCCTCTCTTCAGATCAACTGTTGAACCTGGCTGCCTGTAGGTTCTGTTCCAAAGGGTGGAGCCCCTCAT EMBV3_37939 TGTTACCACAAGAGGCAGAAGAAGAAAACAGATCTGAAAATGAAGCTGAAGAAAAGCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22876 GAACGACTCGGAGCTGGTGGGTTCCGTGGAAAGAGCTAATTTAGAGGATCCTGCGTTTGT Gene BVT0102_016226 + 0 NULL GK000018.2:62353360-62371837 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087504 TCONS_00087503 1 XLOC_052510 NonCoding TCONS_00087503 XLOC_052510 NonCoding NonCoding LOC100848560 18:62353894-62361450 j TSS64972 2489 4 TCONS_00087503_9 131 0.155885897950984 2 0.670814030443415 1.09320054455989e-05 4.84451676790912e-05 0.000153570424503922 4.21021592469334e-22 1.47190132682133e-05 0 0 4.7524462002433e-06 4.6606352039427e-05 0 9.19624604558442e-07 0 5.44711735724845e-89 6.33946938826985e-05 1.57061082640721e-18 0.00010153868192311 5.59855692873047e-05 8.45902409361473e-10 5.16245360631484e-05 0.000247794850865082 4.89520093139568e-06 4.22755215951074e-05 4.21427008052445e-05 9.47419626801121e-05 8.54264820689427e-05 7.76751178554386e-06 2.38821199730576e-06 3.91033094006519e-06 4.32225100246719e-05 1.52901857280171e-08 XM_005221819.1 C21H15orf40 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf40 (C21H15orf40), transcript variant X1, mRNA. 7e-52 210 84.74 0.0751305745279229 0 noncoding 0 0 0 0 0.130646963279697 0.256070933249969 0.0343951607462349 0.569380728752872 GGCAGTGGAAACACTTAATTGGTGTCGCAGGACCTGCATGAAAGGAAGAGACCTTGGAGCTGGAGAGAAAGATACTCCAAGGGTATTTAACCGTTTGCTTTGCCCCTTCGCTCTGTCCTTATCAATCCCTGCTCACTGACTGGACGGGCACAGACGCCGTGAGTGGGGAAGCCCAGTAACACGGCCCCACCCAGCGCGCGGCTGTCCCAGCTGCCCGCCGGCTTCCAGGAACGCGGCCTGTCTCAAGGCCCACGCTCTCGCCCGTCCGGACGTCCTGTGCTTCATTTGTGAAGCTTGTGGCAAGGCCTGCAAAGGACCCCGCTGTCTCTGCCCGCCCCGTCTCACCCACCGAGCTTCCTGCCGCTGCTCCTGCTGCTCCTGGCAGGTCAGCCTTACCAGGGAGCCGGTCAGCACGCCCTGGTGTATCAGGGCAGACTGGGTCTCCTGCTAATGTGGGCACAAAAAGGGAAAGATACAGTGAAAGTCTCTCAGGCGTGTCTGACTCTTTGCGACCCTATGGACTGTAGTTCATGGTATTCTCCAGGCCAGAATACTGGAGTGGGTAGCTGTTCCCATCGCCAAGGGATCTTCCCAACCGAGGGATTGAATACTTGTCTCCCGAATTGCAGGCGGATTCTTTACCAGCTGAGCCATCGGGGGAGCCATCAGGGAAGCCCATGGTGGATGCATAGGGAGGGAAGGGCACAACAGGCATGCCTTTAGGGGGCCACGTCCTGGGAATCCTGCCCCAGGCCGCCAGCATCCAGCTCGAGGGCTGTCAGTTGCAGAGCTAGGCCCTGGCATCTCTGAAGGACAAGGCAGCATCCTTTTCTGTGCTGAGTCTTTCTAACACTGAATGATCTTCAGCCTTCGGGTGTGCTGCGAGTCCGTGGGTGGCAGGGGAAGCAGGAGACAGTATCATGAAAGATGCATTCAACTCCCAGGGCGATTTCTGGTCTCCTTGGCTCAGATGGCAAAGAATCTGCCTGCAATGCAGGAGATCCCTGGGTCAGGAAGGTCTCCAGGACTGGGAAATGGCAACCCACTCCAGTTTTCTTGTCTGGAGAATCCCCATGGACAGAGGAGCCCGACGGACTGCAGTCCATGGGGTCATAAAGAGTTGGACACGACTGAGCGACTAACAACACTTTTTCCTATTGTAGAATGACTGGTTCCTTCTCCAGCCTAGAACGATAAAGTGACTTTTATTTTTTATTTTTATATTTTTTGATAAAGTGACTTTAAAGGCAAGTCACTTTTCGGACAAAAGCTATCTCTTTTGTCTTCCCTCCCTCCGCATCTGCCGCGTCTCCGAATAGTGACTTTATACTGGCTGGGTATTTTCTTTTTTTCAATCCTCCGATGGCAGAGGTGAGGCGCGCAGGCACCCGGAACTGTGGTTCGCGGGTGTTTGTTTCCCGCCGGGACAGATGCCTCGGGCCCCGCCCGGCCGCAATGGGAGCCGGAAGAGGGCTTCGGGCTCTTAGAGTCCATCTCCACCGCGCCGCGGACGGATGTCCCAGGGCCGCGTCTCGGGCCACTTCCCGCCGCGCTCGGACCCGAGAGGCTCCCGCACTGCCAGCCGGCGCCGGGAGGCAGGGCCTGAGCTCCGCACGGCCGGAGAGGCCCGAGCGGCGCGGTGCGTCCGCTGGGGCGCCCGCTCAGACGCAGGCACGCGGGGCGGAACGACTCGGAGCTGGTGGGTTCCGTGGAAAGAGCTAATTTAGAGGATCCTGCGTTTGTCCGCCCCTCAGGCTCTCAGAGGGCTCCTCGACCCCGAGCCTCTTCGGGGGCCATGGGCCCTCCTTCCCTAGGATGGACCCTGCCCACCTCGGGAGGCCCGTCACCCGCTCACCGCCGGGGATGGTGTTGGCCCGGTGTGGCCGGAGCCCAGGCGCTCCTCCTGTCCCCGTCCCTCCCCGGGAGCTCCCCGCATCGCCGGAGCCACAGCACTTCCCGCTCGGAGGTCTTCAAGCACGCCAGCGAGGATTCGGAGGCGTCGCTTCATACACCTGCCCGCTGTGCTCTTGTGTTCTCAGGAGGCCCGGCGGCTGGCCCAGCACGTCCAGGACCGCTCGGCTGGAAGGGATTTCCTGGACGGTGGAGGGACCGCAGGGGCCCCGTAGAGGCTCCCGTTTCTGGTACAGAGGGTAGAGTGCAGGGTCTGGGCCCCCTGCTTACTTGCCTGTGATCTGAGGCTGCCTCGCTGGGCCAGTTTCCTCCTCCTGAAATTACTTGTGACCCCCAGCTATCCTGGCCAGCGGGGAGAAGCAGGAGTCTCTTGTTGGATCCCTGACTCTCCCACAGTCTCTCTTCATAGCCTGGGATCGATCACCACCCATCCTGGACTCAGTTTCTGTGAGATGGGACAGAATGAAGCGTCCTTATCAGCTACCACGCTGGCCCCACGCAGCTCTGGTGCCGGCGGCGCGTGGCGTTCGCTCCCGGATCATCGCGCAACCGGAGGACGAGCTTCGGGCGCGCGGAGT EMBV3_10145 CCACCTCGACCTATTGCTTTCTCTGCACTCATTTATGTTTAGTCTTCCATTCTGTCAGAC Gene GeneID:613327|RGS7BP:NM_001076930:1_cdna Constitutive 0 NULL GeneID:613327 20 GENE RGS7BP MGC142801 regulator of G-protein signaling 7 binding protein EMBV3_37682 CGTTCATTGAAAAAAGTAACCATCATTGTTTTTACGTAAAAGTAAAATCTGCCATAGAAG Gene GeneID:100337484|LOC100337484:XM_002692008:136_cdna Constitutive 2 NULL GeneID:100337484 12 GENE LOC100337484 NULL tumor necrosis factor (ligand) superfamily, member 13b-like EMBV3_30828 CGTCGTGAGCTCGAGATGGCAGCGTCCTAAATCCTGATCTTTCATTCACACTGGCTCAAT Gene BVT0102_096344 + 0 NULL GK000012.2:15832443-15896376 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034630 TCONS_00034621 TCONS_00034627 TCONS_00034624 TCONS_00034623 TCONS_00034629 TCONS_00034628 TCONS_00034625 TCONS_00034622 TCONS_00034626 1 XLOC_020720 NonCoding TCONS_00034627 XLOC_020720 NonCoding NonCoding - 12:15834312-15895726 - TSS25542 794 1 TCONS_00034627_1 43 0.249370277078086 3 0.987119990881409 0.00100024274430412 9.81126202448674e-29 0.000357484877976447 2.60144670225056e-09 6.34996069860211e-05 0.000131071785763847 5.69503058483108e-05 1.94258662233405e-38 0.000220960334199336 1.03638048468131e-05 0 0 2.59038949376351e-07 0 0 0 0 0 0.000839018971260747 0.00283538622776846 0.00103030733837895 0 0 0 0.000856002199970981 0.000457128677258905 0.00047653844467342 0 0 0 XR_227265.1 LOC101902486 PREDICTED: Bos taurus uncharacterized LOC101902486 (LOC101902486), 2e-159 565 100.00 0.392947103274559 NM_198849.2 SIAH3 Homo sapiens siah E3 ubiquitin protein ligase family member 3 (SIAH3), mRNA. 5e-29 132 72.28 0.331234256926952 0 noncoding 0 0 0 0 ATCCAGTATGCAGCGTGGTTGAGGAATCACCGTGGTAAGGTGGGCAACGCTGCCTGATTCTCGGTAGAATGCTCATTTCCTAGTCGTGGCTGTAGGTGAGCAGGCTTATGTGATGGAGAGGAGTTTACCCACTCTGCTGACGGAAAACCAATGACCGTCGTGAGCTCGAGATGGCAGCGTCCTAAATCCTGATCTTTCATTCACACTGGCTCAATTTCTGAGCTTTGAGCAGATTCCAGAAGGTGAGCCGGAGGTGGCAGCCCGTTCCCGCAGAGCTCCTCGCCCATCACTTTTCACTTGCTGTGACCCCTGTATCCTTCGCGGCACCCGTAAGTGCCGAAGTTGATGAACTACAGCCCGTCGGACAAATCCAGTCTGCTGCCTGTTTTGTAAATCGAGTTTTATTGGAGGACAGCCATGCTCATTCATTCAGCTGCATCGTGTGGCTTGTGGGCATCTTAGTTTCCCGAGCAGGAATCGAACCCATGCTTCTGGCATTGGAAGCACAGAGTCTTAACCGCTGGACCACCGGGGCATTTTAGAAGTAAGGAAAGGAAGGAGGACTCTCCCAGGTGTCTGAGTGATGGGGCCAGGCCTCCGGGCCAGAGGGCCAGCTGCACCCTCCGAGTTTCTTGTGTCTGCTGCTGAATCATGGTTCTGAACTGTCCAGAGCAGAGGAATCCTTGCTGGATACAAAAGCACTCCACCCCGAGGGAAAACACTGATGGATTTTATAACTTGATAATAAAGCTCTCTCTGGGGAGAATGCCCTCCCAGAGGTAGGAGATTAATTT TCONS_00036270 r 3' 646 TCONS_00034619 TCONS_00034620 s 3' 1871 EMBV3_11697 GTGTCTTGGGGTGTTTTGCCTTGGCTTTATCCAGTTTGGGACTCTCTGGGTTTCTTGGAC Gene BVV0102_216420 + 0 NULL GK000030.2:74058286-74152251 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141532 TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00249881 TCONS_00207277 TCONS_00251214 TCONS_00214738 TCONS_00249013 TCONS_00185686 TCONS_00137809 TCONS_00197112 TCONS_00238308 TCONS_00152860 TCONS_00160965 TCONS_00022065 TCONS_00032588 TCONS_00040555 TCONS_00251916 TCONS_00091329 TCONS_00006357 TCONS_00108588 TCONS_00129415 TCONS_00056147 TCONS_00021194 TCONS_00187583 TCONS_00189353 TCONS_00019991 TCONS_00091802 TCONS_00231021 TCONS_00190337 TCONS_00152647 TCONS_00250580 TCONS_00175849 TCONS_00019197 TCONS_00230725 TCONS_00117462 TCONS_00250544 TCONS_00020022 TCONS_00232966 TCONS_00048821 TCONS_00245928 42 XLOC_085960 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_152824 XLOC_125795 XLOC_154157 XLOC_130757 XLOC_151956 XLOC_111739 XLOC_084019 XLOC_118775 XLOC_144975 XLOC_092625 XLOC_097858 XLOC_012736 XLOC_018828 XLOC_024371 XLOC_154857 XLOC_056104 XLOC_001920 XLOC_064493 XLOC_078128 XLOC_033950 XLOC_011867 XLOC_113628 XLOC_115392 XLOC_010669 XLOC_056573 XLOC_140510 XLOC_116372 XLOC_092412 XLOC_153523 XLOC_105628 XLOC_009877 XLOC_140215 XLOC_071628 XLOC_153487 XLOC_010700 XLOC_142448 XLOC_028952 XLOC_150855 Coding TCONS_00218178 XLOC_131641 NonCoding NonCoding - 7:99213677-99241810 - TSS162275 5729 2 TCONS_00218178_2 157 0.905568161982894 3 0.796459547845869 0.000886771403701653 0.00102376193620026 0.000637427881539969 0.00060712227498956 0.000861658363640783 0.000240511398755287 0.0006507876490391 0.000334216051602831 0.000730185142003349 0.000214057065001311 4.3941352307135e-05 8.08315428101829e-05 0.000233250163478171 0.000763452724724909 0.000798732785629046 7.35735537230835e-05 3.13399592248213e-05 3.72164237701071e-05 0.000220143769383598 0.000283865233785678 0.000112882883633591 4.31142807595197e-05 6.58079553498174e-05 3.90706298563263e-05 0.000459456809083102 0.000383679264587045 0.000370165826075435 3.40174828754841e-05 6.31436507816371e-05 7.1976296098839e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 3e-131 475 97.51 0.0488741490661546 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-83 315 68.10 0.168964915342992 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 -0.0148602594801673 0.803029043356466 CTGCTCTAATTTTTAAGATTTCTTTCCTTCTACTAACCCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTATAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTAAGGTATGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGCCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGGTTTTTTCCTGTAATTGAGATCTAATCTTACTGCATTGTGGTCAGAAAAGATGCTTGGAATGATTTCTATTTTTTTTTAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGATGAAATGTCCTATAGATAGCAATTAGGTCTAACTGGTCTATTGTATCGTTTAAAGTTTGTGTTTCCTTGTTAATTTTCTGTTTAATTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGTGGCACTCCCGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGATCATCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAACACATGCAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCGTTGCCATTTACTTTATTGTTTTGGGTTTGAATTTATACACCCTTTTTGTGTTTCCTGTCCAGAGAATATCCTTTAGTATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGAAAAGCTTTTGATTTCTCCTTCATACTTGAATGAGATCCTTGCTGAGTACAATAATCTGGGCTGTAGGTTATTTTCTTTCACCATTTTAAGTATGTCTTGCCATTCCCTCCTGGCTTGAAAGGTTTTTATCGAAAGATCAGCTGTTATCCTTATGCGAATTCCCTTGTGTGTTATTTGTTGTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTTGTGTTTGATCTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCTCCTTGGGTTTATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCAACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACCCCTATGATTCGAATGTTGGAGCATTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTTTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCCTTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTCATTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTGATTTCAAGATTTTGGATCAATTTCACTATCATTATTCAGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGAGCATTTATCCTGTTCCTTTATCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTAAATTTCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCGCTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGGACGCTTGTGTTGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTAGAGTGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATTAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTCCAGTTATTGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATCGATAAAACATCTACGTTAAAGATGAAAAGTTTCTCTACCGTGAGGGTCACCCAGAGAGGTTCACCGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAATCACTTCCTCATGTGCACTCCACAACTGGACCTCTCAGAGATGTTCACGGAGTTATACAGAGAAGAGAAGAAGGAGGAAGGAGACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAACTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGAGTCCAAAGGGAGAGAGAGCAGTTAAGCCAGTAATCTCATTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTTTGGAATTTCAAAAATATGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAAAATGAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAATATAGGTACAAAATTGATAACTAATACCAAAAAGCAAAAGTTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTAAAAAAAAGAAGATGAAAAAGAAAGAGAGAAAAACAAAAAACAAAACCAATGTCACAAAAATTATAAAGAAAATACAGGTACAAAATTGATATCAAATACCTAAAAGCATAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGGGGAAAAAAAGTCACAGAAATTATAAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGCTAAAGAAAAGAAAAAAAAAAACAAGGTCAAAAAATTATAAAAATATATATATATATGAAGTTTGCTGAAGAAAAAAAAATAGGGTCTTTTTTTTGTGCAAAGTAATAGGTTATAAAAGTGAAAATTAAAGGAATAATAGAGGACTTAAATTTTTTTTTAATTAAAAAAGAAAGAAAGAAAAAATGATCATAAAAGTAGTAAAAATATATCGAGGACTTTCTCTGGTTTTGTTGTGAGTATTGTGGGTTCAGCTCATTTTTGGCTAATTCCTTGGTCCGATTTATATTTCTCGAGATCTATAGGCCCCTTCCTATGTAGTCGGTAGTAACCACAGGGTTTTAATCTATTGCCTGTAGCTTCCAAGGCAGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGGTTTCCACCCTGACACAAAGAGGATGGTGGAGGACACTTTTTTTTTTTTAGGCTCACTTGTTCAGTTGCGCAGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCACAGTGCCTCAGCCACACTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGTTCCGCCGGGAACCATCCATGGCCAGCCCTGGGCTGCCTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCCCTCGGGTAGTCCTCAGAGGCACAGACTCAGCTGGGCCTGCATTTTGTGCCCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTAAGCGAGCACGATTGCTGCGACTTATCACCTCCCCGCCACTTGGTTATCTAGGTGTACAACCGGCGCACCTTCTCAGGCAGATGTTAACCATCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGAGATTGCCCCCTTCCAGCTCTGGCTGCGTGTCACCCGAAGGGGAAGGTCTGCAGCCGGCTATCTCTGTTTAGTCCTTTGTTCTGTGCGTGGGCCTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGTGTGGTAGATATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCACTCAGATAGCGCTCAGGGTATTCAGGCCAGGTCCTTACTCTAAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCCGCTTGCTAACGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGCAATCTGCGAGTTTTAATTGTTTATTTATTTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTTGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGACTCCCTTCCCGGGACAGAACTCCATCCCTCCCTCTTTTGTCTCTTATTTTGTCTTTTATATTTTTTTCCTACCTCCTTTCGAAGACTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCTGGCATTCAGAAGTTGTTTTGTGGAATTTACTCAGCATTTAAATGCTTTTTTTGATGAATTTGTGGGGGAGAAAGTGTTCTCCCCATCCTACTCCTCCGCCATCTTGGCTTCTCCCCCTTTAACAGTTTTATTTCAAGCCAACACCTGAGGCAAATATAAGGGATAAGGGATGAGGTCTTAAAAGTTGATCATGTGCTGTAGTAGGTACATATGTTGCCTTCAGCCTACCTCCTTCTTTGGAAACAGCCTCTCCTGACCTTCTTTTTCTACATTATTGTTTCCAGCCTGTCTTCTTTCACAGTACTAATTGGACCAGGTGTGGATCACTGAGCCAAGAAATTCAATCAGTGTTCACCTGGAGAAACAGAACTGAAGGAAGCGGACCTGGACCTGGGGCACAGAGGTGTCAGCATGTTCAAACACAAGCAAGTCAAAGTTACTGTCAATAGGAGAACGATCTAATCTCTGTCCTGCCCATGCACTACCAACAATCCTAAACCTACTATATCTACCAGAACAAAGAGGAATCGGATACCAAGACGGTCTTAACGCTGGATCCACTGCTTTGATTTTAGCAACTTCGGGGAAGAACTTAACCCTGATTCCTCTCTCTAAAGAAAAAGAAAAAAAAGAAAATGAAGAAGAAAATCCTGACTT TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178422 TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178503 EMBV3_43616 TCGGCATCCACGAGGAAATGCTGAAAGATGAGCGGAACGACTACGTGCACGCCCTGGTGG Variant GeneID:520388|PRMT1:NM_001015624:259_cdna 185^802 1 EMBV3_16859 GeneID:520388 18 GENE PRMT1 HRMT1L2 MGC134042 protein arginine methyltransferase 1 EMBV3_05731 CTCGGATGTTCCACCGCCCAGAGCTTGCATGCGCCCCTCCTCCCTCGGGACCTGTTGTCC Variant GeneID:506163|MOSPD3:NM_001034265:98_cdna 121^185 4 EMBV3_25568 GeneID:506163 25 GENE MOSPD3 MGC127964 motile sperm domain containing 3 EMBV3_21685 GGATTGGCTGTTTGTGAAACTCCACATGAGGAACCTGATGTTAAAAAACTAGAAGAGCGA Variant GeneID:327714|NDUFA5:NM_175829:16_cdna 70^186 1 EMBV3_15896 GeneID:327714 4 GENE NDUFA5 B13 MGC133631 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa EMBV3_14786 GGCAAAGAGTGAGAATTCATACCAGAGCTTTCCCAGGTTTCTCTCTGTGGTGTGTCGACC Gene BVV0102_133307 + 0 NULL GK000014.2:75904966-75988981 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14547 ACTCGTGGATACTGGAGAGAAGCTTTGACTTGCCTGGAAATGCTGTGGTGCTAGGGCACT Gene BVV0102_296983 + 0 NULL GK000024.2:33951332-34548446 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32677 GGTGTGACCACCACCGCATCCTCTCCACCCATGAGGACAGAGCGGCGTCCTGGGAGACAC Gene GeneID:505490|TMEM40:XM_002697107:10_cdna Constitutive 0 NULL GeneID:505490 22 GENE TMEM40 NULL transmembrane protein 40 EMBV3_30633 ACGCCACCACCAGTATCGGTGGTGCAGCTGCCGCCATCGGAGCCATATTTGGCCTCACCT Variant GeneID:326346|NDUFA11:NM_175718:12_cdna 151^243 2 EMBV3_15104 GeneID:326346 7 GENE NDUFA11 b14.7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa EMBV3_25645 ACCAGGCACTCTTCCAAAAGCTGGGGACACAGCAACCAACACAATAGTAAAAAGCCCCTG Gene BVT0102_342919 + 0 NULL GK000018.2:53093166-53099705 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34222 CTCTAGAAGGAGTCAATAGCAGAATATCTGAAGTGGAAGAATGAATCAGTGAGCTGGATG Gene BVV0101_009804 + 0 NULL GK000021.2:28692944-28932926 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159453 TCONS_00159443 TCONS_00049262 TCONS_00159445 2 XLOC_097421 XLOC_029393 Coding TCONS_00159445 XLOC_097421 Coding Coding P4HA1 28:29105903-29259531 x TSS119479 1755 1 TCONS_00159445_5 98 0.913390313390313 2 0.988589245380044 0 7.80002946271745e-216 0.000166230918177087 2.48071158869189e-50 1.2428904023222e-42 2.64239539273017e-169 3.65563712803053e-18 3.18399444733293e-36 0.000162586726269855 4.01679660115367e-73 6.28277819038237e-05 0 7.12750275674628e-113 1.05152260812265e-08 0.000242747645392227 9.02957855955369e-05 0 2.85936215356255e-05 3.97203763089356e-29 2.09634828606473e-39 1.24789100990526e-53 8.96721656518941e-06 7.17583193998642e-130 2.42780206967043e-08 0.000197501390483944 7.16993950855569e-05 5.51316855821389e-23 2.18921892752597e-05 2.76615861160636e-05 3.42577980003952e-06 XR_240490.1 LOC101904940 PREDICTED: Bos taurus uncharacterized LOC101904940 (LOC101904940), 2e-134 484 99.63 0.153846153846154 NR_033805.1 WAC-AS1 Homo sapiens WAC antisense RNA 1 (head to head) (WAC-AS1), 4e-21 107 68.59 0.191452991452991 TCONS_00159445_5 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 3e-24 95.9 50.55 0.918367346938776 1 noncoding ACACCGCTTAGTAATTGGGAATTTCAACAGGACTAGTTCAATGAAGGAAAAAAATGGAACCCCAGAGACCCCACTCTGTCTGACCTGCACCTCCACAGGCTTTAATCAATGATGGAAATGCTTGCAAAGAGAATGTTCAAAATCAGTTTGAAGACAGGACGGCAGAGTAGGTGGGCGGTGAGTACATCTCTCTCCATGGATGAATCAGGAATACACCTTCAGACACAGAAGTGCACGCAGAACACCAGCTGAGGGCGGACAGGAGAACCTGACCAGATGAAAAGAATATACAGAACCACACAAAGCTCAAGAGCAAGCCCTGAGCCTATGGAGTGGGAACACTGACTCCAAGACCCTAGACTACCAAAGAACTAATCCTAGAGAGTATCAAATAGTGAGAACTCACACAGTGGAAACCACTTGAATACAAGACCTGGCATCACCCAACCACCAGGAGCGCCCTGTGCAGGACGCCTCATCTAAACAACAAATAAAACAACAATACAAACCTAATCAGCAGCAGACAGGATTACCACCTCACTCAGCCTTGCCCATCATAGGAAAAACAAACAAACAAACAAAAACTCAGCATAAATCTCACCCTATATGAAGCTTACACAAACCACTGGACCAACCTTAGGAGGGCAGAAACCAAAAGGAAGAAAGAATTCAACCCTGAAGTTGGGAAAAGGAGACCTCAAACACAATGTTTAAAAAGAAAAAAGGCAGAGAAATACTACATAAATGAAGGAATAAATTAGAAACACAGAAGTCCAAATAAATGAAGAGGAAACAGGCAAACTCCCTGAAAATTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAACTGCAAGAATCAATTAACAAAGACCTAGAAGAATTAAAGAATAAACACTCAGAGACAAACACCACAATTACTGAAATTAAAAATACTCTAGAAGGAATCAACAGCAGAATATCTGAAGCAGAAGAATGAATCAGTGAGCTGGAAGATAAAATGGTGGAAATAACTTCTGAAGAGCAGAATAAAGTAAGAAGAACAAAAAGAACTGAGGATAGTCTCAGAGACCTCTGGGACAATATCAAAAGCACCAACATTTGAATTAAAGGGGTCCCAGAAGAAGAAGAGAAAATGAAAGTGTATGAGAAAATTTTTGAAGAGATTATAGTTGAAAATTTCCCCAACATGGAAAAGGAAATAGTCAATCAAGTCCAAGATGCTCAAAGAGTCCCATACAGGATAAACCCAAGGAGAAACATGCCAAGACACATACTAATCAAGGTAACAAAGACTAAATACAAAGAAAGAACATTAAAAGCAGCAAGGAATAAGCAACAAGTATCATACAAAGGAAACCCCATATGCTTAACAGCTGATCTTTCAGCAGGAACTCTGCAGGCCAGAAGGGAATGGCAGGATATATATTAAGTACTGAAAGGGAAAAATCTACAACCAAGATTACTGTACCTGGCAAGGATCTCATTCAAAACTGATGGAGAAATAAAAAGATTTCCAGACAAGCAAAAGTTAAGAGAATTCAGTACCACCAAACCAGCTCCACAACAAATGTTAAAACAGACTTAATAGTCAAAAAAACAAGAGAAGGAAAAAGATCTACAAAATCAACTCCAAACAATTAAGAAAATGGCAATAGGAACATACATATCAATAATTACTTTAAATGTAAATGGATTAAATGCTCCAACCAAAAGACAAAGACTAGCTGAATGGATAC TCONS_00160503 TCONS_00160504 r 3' 283 TCONS_00160503 TCONS_00160504 r 3' 391 EMBV3_30865 CCTCCTTCTTTGATGTGACCCCCATCCCGGACACAGGATTTTCCACTTTTGTATCCGTGG Gene GeneID:780805|LOC780805:NM_001079644:98_cdna Constitutive 0 NULL GeneID:780805 3 GENE LOC780805 MGC134280 SAMD13 dnaj-like protein EMBV3_03474 GGGCTGAGCCCAGAAGTCTGTCTATAGGAAGTATTCCAAGTTACTCTGATTAATAGCCAG Gene BVV0102_297667 + 0 NULL GK000014.2:50151919-50606042 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11746 GCCAGCTTGATATTAGGGAACCCTTTTCCATGGCTGTTGTTTTCATCGGGTCTGTGTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29500 GTGCGCACAGCACGTGATTCTGACAGGTGGACTTGGAAAGGCTAACTGTGTTAGACTCAT Gene BVV0102_108002 + 0 NULL GK000024.2:55161460-56404065 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140651 TCONS_00140650 1 XLOC_085174 Coding TCONS_00140651 XLOC_085174 Coding Coding TXNL1 24:56402906-56446697 = TSS104922 2353 1 TCONS_00140651_1 289 8 0.946448960949989 0.00793045918807146 0.00689222219772803 0.00767744142190088 0.00572077406438148 0.00445058526567581 0.00157685752019555 0.00616238497693668 0.0067651711707004 0.00971426373637573 0.00262104141160484 0.000272130173587909 0.000267376825330555 0.000964444663906108 0.00294943649863294 0.00236985565977865 0.0124796211978945 0.00651388826254101 0.0247197174882418 0.00881047372273857 0.00872565917773412 0.00462746167848133 0.00185924414112842 0.00404178413034942 0.00781169048387983 0.00743479459185905 0.00934493598485323 0.00712131876319643 0.000930399527311077 0.000450707748292679 0.000568597731431785 NM_001077886.2 TXNL1 Bos taurus thioredoxin-like 1 (TXNL1), mRNA. 0.0 2114 99.91 0.498937526561836 NM_004786.2 TXNL1 Homo sapiens thioredoxin-like 1 (TXNL1), transcript variant 1, 0.0 1793 91.44 0.540161495962601 TCONS_00140651_1 sp|O43396|TXNL1_HUMAN TXNL1_HUMAN Thioredoxin-like protein 1; 0.0 599 99.65 0.996539792387543 2 coding 0 0 1 0 -2.95803424809226 0.0213318252928227 0.0105488462464093 0.862910542113688 CCGCCCCCTCGGCCGCTCCGCTCCCTGGCGTGACTCGGCACTGAGAGAGCGCCGCGGGAGAAGACGCCCCGGCCGCCGCCTCCTCAGTCCAGGCTTGGGCCTTCCCGCGCCTCCCGCCGCTTCCTCCCCCGGGGCCGCTCCTCCGTCAGGTTTGAAGCCGGCGGCGTCGCGGCCGCCCTGCCCAGGCTCCCCGAGAATGGTGGGCGTGAAGCCGGTCGGGAGTGACCCGGATTTCCAGCCGGAGCTGAGCGGCGCGGGCTCCAGACTCGCCGTGGTCAAGTTCACCATGCGGGGGTGTGGGCCGTGTTTAAGGATTGCCCCAGCATTCAGTTCTATGAGTAATAAGTATCCACAGGCAGTTTTCTTGGAAGTAGATGTACATCAGTGTCAGGGAACAGCTGCCACCAACAATATATCAGCAACACCTACATTTCTGTTTTTTCGAAACAAAGTGAGAATTGATCAGTATCAAGGAGCCGATGCTGTGGGACTAGAGGAAAAAATCAAGCAGCACTTAGAGAACGACCCTGGGAGCAACGAGGACACCGATATTCCGAAAGGCTATATGGATTTAATGCCTTTTATTAACAAAGCTGGCTGTGAATGTCTGAATGAAAGTGATGAGCATGGATTTGACAACTGTTTGCGAAAAGACATGACCTTCTTGGAATCTGATTGTGATGAACAGCTTCTTATTACTGTGGCATTCAATCAGCCTGTTAAGCTTTATTCAATGAAATTTCAAGGGCCAGATAACGGTCAGGGTCCTAAATACGTAAAAATTTTTATCAATCTACCGCGATCTATGGATTTTGAAGAGGCAGAAAGAAGTGAGCCAACTCAAGCTCTGGAACTAACAGAGGATGATATTAAAGAAGATGGTATTGTCCCTCTTCGTTACGTTAAGTTTCAGAACGTTAACAGTGTAACCATATTTGTTCAGTCCAATCAAGGTGAAGAAGAAACAACAAGAATTTCATATTTTACTTTTATTGGGACTCCAGTCCAGGCAACAAATATGAATGACTTCAAACGAGTAGTTGGAAAAAAAGGAGAAAGCCACTAAAGGTACAGAAGACACTGGAAGACCATGTTGCAATCAGAGCTACAGCTCCTGGATAATTGCTTGATTCTCGCCAGAGACTTTCAATATTTCATTCATTTCCATTACCAATAAATCATTGCTTTTGTTCAGATGGTATCACTAGTGTTTCTCTTGTAACCTTAATACATGCAGTTGTAAATAAAAATAACTACTTTTGCCAAGCTTAATTTTTGTTGTTCTAAATAAGTATTTTCTCTTTCCATTTATGTGAAAATTGGACACCTTCTGATTTTAGCAGACTTCAGTGTCTGATAGTGTGTTGATCAAAAGCCTGTTTCCCTCCTTAGAGGAGCAGAAGTGCTTTAGGAACTGAGGCGTGTGTGTGCGTTCATGTGCGCACAGCACGTGATTCTGACAGGTGGACTTGGAAAGGCTAACTGTGTTAGACTCATAGTTTGTTCAACAGCAGTTGGGCATCTGGGCTATAGAAAACACCCACATTATAAACTACCAGAAATAGATTAGTTTAACGAGACTTAACTGTTCCCACCTAAGACTGTCAGAGGGAGCACAGATTTGATACCCTTTTGGATAGACTTAAAACTTGAGTCATCTTTATCAACGTATGTTGAAAGGTATGTTGAAAATATATGTTGAAATCCAACAGTAGGAAAAAATAAAAGTACTGTGCATTCATGAAGCAGCAGGAATTGATATCTTTTAATGAAGTATTTATTATTTTAACTACCAAATGATGCAGTGTAAATATACAGAGAACTTGGTTTAAGGTTGAAAATGAATTGGCCACGTGTATGTTTAAAAGGTCTTTTACAAAAGGCTGGCAAGACCATCTGTTCCGTATGACTTAAGAATCTTAAACTATAATCTAGAAAGGATTAATTTTTTAATTTTTCTATTTTTAAAACTAAAATTTGATTTTTAAATTTCTCTGAGTATTTTAAAAATTCAGTGTTTGAAAAGAATATATAAGACTTAATTTTGATTCAGTTAATAGTAAATTTGAGGGCCTATTTGTCTAGGACTATGATCAAGATACTGATTTGCCTTTGAGACACCAATGTATTTATACGTGTTTCTGAAAAATAAAAATTATGTCCAAGTTTTTGTGGTAATCACTTTGTGAAACCCTAGTGTCGCTAAGTAATGTTTAGTTTCTTTGTATGGAAGCACATGAGCTGGTCTGTGGTGATGTCTACATAGTATCTGTATTTCCTGATTATGTTGCCTTGGATCAAATGGAAACAGAAAGGCAAGAAGTAAAATAAATAAAAGTTTATAAAACACTGC EMBV3_40505 CTCTTTCTCCATCTGGCTGGGACTTTTGTGGGGGAACACCTGCTTTTTGGTACTCAGATC Gene GeneID:516135|SLC2A10:XM_002692488:584_cdna Constitutive 0 NULL GeneID:516135 13 GENE SLC2A10 NULL solute carrier family 2 (facilitated glucose transporter), member 10 EMBV3_16242 TTCCTTTATGTTGTGGACACTCGGCCCAAGTGTGTGAACTTAAATCTCCCTCCATGAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26522 CTGACGTGCGTCCGGATGGGATAGAATAAGATACTGGCCTTGGACAGCTATGGTACATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15515 CAGGTGCGCCAGATCCGCAAGAAGATGATGGAAATCATGACCCGAGAGGTGCAGACAAAT Gene GeneID:613970|LOC613970:XM_002700326:43_cdna Constitutive 0 NULL GeneID:613970 X GENE LOC613970 NULL similar to ribosomal protein S3a EMBV3_03586 TAACTTGTGTGAACTGTGTGCCCTGTGGAGTCTTACCAATCATGCACTGTGTACCAAGGC Gene GeneID:504813|NPY1R:NM_001045898:40_cdna UTR3_Alt 2 NULL GeneID:504813 6 GENE NPY1R MGC137850 neuropeptide Y receptor Y1 EMBV3_23481 AATGCCATCTATGCACAGGCTCCGTTTGGTGGCTTCAAAATGTCAGGGAACGGCAGAGAA Gene GeneID:507093|ALDH1A3:XM_002696517:121_cdna UTR3_Alt 3 NULL GeneID:507093 21 GENE ALDH1A3 NULL aldehyde dehydrogenase 1 family, member A3 EMBV3_11880 TTCTAGAAACATTCTGTGCACACATCCTTGCGTCTTCTGCTGAGACAGTGCTTTGCAAAG Gene GeneID:508634|FAM32A:NM_001105004:50_cdna Constitutive 1 NULL GeneID:508634 7 GENE FAM32A MGC166090 family with sequence similarity 32, member A EMBV3_30329 TGAGGCTACTGCAGCTGAGAGATCCTGGGCCCTCTGATAAAGACCAGCAGAAGGGATGAT Gene BVT0102_140725 + 0 NULL GK000006.2:73863781-73951844 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205601 TCONS_00205594 TCONS_00205602 TCONS_00205598 1 XLOC_124680 Coding TCONS_00205602 XLOC_124680 Coding Coding LOC100847479 6:73920488-73945124 = TSS153486 710 1 TCONS_00205602_1 89 5 0.971382179825452 0.000155762961500809 0.000325498156991705 2.49150612927475e-05 0.000100574743937553 1.6066592602472e-05 2.22303623989323e-11 0.000186753700340835 1.76036337314433e-05 0 0 9.67254837895982e-06 0 0 0 1.72726042007905e-06 0.00149040687507366 0 5.68290588936722e-42 4.66986768545086e-11 0.000682648327322722 0.00052568840973779 0.000541000805328581 0.000251244340652288 0.000499900323117475 0.000238144406942922 2.40120574331903e-10 0.000451638301019376 4.82367096788232e-13 9.22961316504387e-05 3.2542174085108e-05 NM_001114858.2 SPINK2 Bos taurus serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) (SPINK2), mRNA. 5e-60 235 82.64 0.333802816901408 NM_021114.3 SPINK2 Homo sapiens serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) (SPINK2), transcript variant 2, mRNA. 5e-54 215 74.77 0.41830985915493 TCONS_00205602_1 sp|P20155|ISK2_HUMAN ISK2_HUMAN Serine protease inhibitor Kazal-type 2; 5e-19 77.0 70.00 0.550561797752809 2 noncoding 0 1 1 1 0.0477231917323779 0.643359514166355 0.00996902548543659 0.837344004316869 CGCGCAGGCGCTGGAGCGCACAGGGACCCGACCGCCGGCCAGGCGGGAGGATGGCGCTCGTGGGGCTGCGCTTGGTGCTGTTATTCTTGGTTGGGGACTCGGCAGCCTCTTTGAATGCTCAATTTAGTCAACATTTAGAACAAAAAACACCAAACTGCGATCAGTATAAATTACCAGGATGTCCCAGGGACTTTAGCCCTGTGTGTGGAAGTGACATGTCCACTTATCCCAATGAGTGTATTCTGTGCATGAAAATCAGTCTAGCCACAAGAACTCAAGAGGGTAGAGGGAGAAATTTCTTCTACCCTGACAGTTGGTGAGCCAGGAGGAGCCTGGTTGGAACCCGCTTCTCACCCTGAGGCTACTGCAGCTGAGAGATCCTGGGCCCTCTGATAAAGACCAGCAGAAGGGATGATGGTCATGATATTAAAATAATCCAAAGTGGACCATGCTGATGGAGCATTTCACAGAAGAGGAATTGGAGAAACCACCTTCCACTGCACACTAAATGAACTTCATTTCCCGCTTTTCTCTTTTCCTGTATTTCTTTGCATGAGATTTTCTGAGATGAGTTGTGTAGGAGGGCAGTGACTGATAAAACAACTACAAAATCCTCGTTTTTGGCTTTTGTCATTTTAGTTAAGCTTATTGCCCAGATGACCTATGCATTGCTTTATTTAGTTGGAATAAAATCAGTACTGTATTTAATC EMBV3_38842 CCCTCAGCCAGATGTGTCCAAATAAGTGAATCAGAGATCCTCGAAGTTTCTCAGGGCTTC Gene BVV0102_318016 - 1 EMBV3_33877 GK000026.2:28630478-29338555 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29031 CGTGCAGAATAAGAACAGCAGCTACTTCGTGGAATGGATCCCCAACAACGTCAAGACAGC Gene GeneID:615087|TUBB2B:NM_001046549:195_cdna Constitutive 0 NULL GeneID:615087 23 GENE TUBB2B MGC128415 TUBB TUBB2A TUBB5 tubulin, beta 2B EMBV3_41846 CACTTGTTAGGAAGCTTTTGTTATGTATTTTCTGTTAATAGTACTTAAAACTGCAACTTC Gene GeneID:533853|SENP6:XM_002690035:31_cdna Constitutive 4 NULL GeneID:533853 9 GENE SENP6 NULL SUMO1/sentrin specific peptidase 6 EMBV3_02990 TGGGAGTTTCTCCTCCCATGAGCTCCGTTGTTGTGGAAAAACATCATCCGGTCACAGTGC Gene GeneID:533555|MGC157319:NM_001102158:24_cdna Constitutive 1 NULL GeneID:533555 10 GENE MGC157319 NULL hypothetical LOC533555 EMBV3_19903 ATAATTAGATACTTTCCTGTGTTCGAAAAGGAGTACACAGTGAAAATCAGTAATATCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36884 ATGCTTCAGATAAAAGCAAAAGGGAGTAGCAGAGAGCAGTAGGGAGAGGACCCTTGCCTC Gene GeneID:507498|CKAP2L:NM_001098901:53_cdna UTR3_Alt 2 NULL GeneID:507498 11 GENE CKAP2L FLJ40629 cytoskeleton associated protein 2-like EMBV3_27523 GACAGGCAGGGACACGCATATCTGTCAGGACACGAGCCTTGGACCTTCTGTTTGTTGATT Gene GeneID:533357|NAGA:NM_001046349:186_cdna Constitutive 0 NULL GeneID:533357 5 GENE NAGA MGC140188 N-acetylgalactosaminidase, alpha- EMBV3_43126 TATAGCCGTTAGTCCCTCTCTCTTGGAGGACTTTGTGCACTGACCTTGTCCTGTTGTGTC Gene GeneID:539022|ZNF2:NM_001046446:83_cdna Constitutive 0 NULL GeneID:539022 11 GENE ZNF2 MGC138038 zinc finger protein 2 EMBV3_15819 AACTATCAGAAGGAGTTGGAAATGTCAACCCAGAGTGGAGGACAGCCTGAAAATGCCCCC Gene BVT0102_068917 + 0 NULL GK000001.2:42531539-42678532 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000419 TCONS_00000421 TCONS_00000422 TCONS_00000420 TCONS_00000423 1 XLOC_000123 Coding TCONS_00000422 XLOC_000123 Coding Coding LOC100848540 1:42566967-42571816 = TSS217 929 1 TCONS_00000422_2 196 4 0.809199669966997 0.112529227945811 0.0937534266293575 0.118096486692272 0.0780439745628905 0.0584120469563059 0.0295010880232089 0.056123536964424 0.0516489789486728 0.0532164158917199 0.00353253887010507 0.00142478830948899 0.000793998305788121 0.00402258082975904 0.010085380531862 0.00757682596739143 8.95936927895458e-10 2.44200731751916e-10 2.02583494074662e-06 0.39668482195587 0.276057888437571 0.143973588388225 1.41805453208228e-11 2.50595864616801e-11 2.08134947893261e-10 0.141452849053397 0.148622587731043 0.129147114127506 0.00171201695311038 0.000250697088160656 0.000206476822552167 XR_228963.1 LOC100848540 PREDICTED: Bos taurus uncharacterized LOC100848540 (LOC100848540), 0.0 672 100.00 0.399354144241119 TCONS_00000422_2 sp|Q9D5H4|FTMT_MOUSE FTMT_MOUSE Ferritin, mitochondrial; 3e-17 78.2 38.46 0.647959183673469 1 coding ATGGCATCCCAGGCAAAGGGCCTTCTTTCTGAAGAATGTAGGGATGCTCTTAATCAAGTAGCATCTTATGAGCTGCATATCAGTGATGCTTATTTATCTATGGCCTGTTATTACATTGAAGATCCAGAAGCACCTACTTTTCATACATTCTTCCAAGACCAAGCTGATGTGAAGAGGGAGCATGCAAAGCAGTTCATAAAATATCTAAGAAAATATAAGTGTAAAATCTGCCTTCCGGTGATTAAGAGGCCTGATATAGATAACTGGGGAACTGGTAAACAAGCTCTACTGTCTGCTCTGCAGTTGGAGAATGAGTTAAACAAGCTCCTGCAAGACCTGAAGGCCTCAGCTTCTAGGAACAGAGAAACCAATCTCTTACGCTTCATGAAAAAGTTCCTGGATGAACAGACCAGGAACATAAAATATCTGGAATACCAGCTTAACTATCAGAAGGAGTTGGAAATGTCAACCCAGAGTGAAGGACAGCCTGAAAATGCCCCCGGAACATCTGCAGCAGCAGGTCAAGAGACAGAATCTACAGGCAACTCTCCAAGTCCTCCTGCCCAGAAGGTCCCAAAGTCATCTCCTTAAGAATCCTGATCTCCATTTGACAGAAGTATGCTTCTCTTTTCATCTCAGATCCTAATCCTCCTGTTGTACATGCAAATAAATGTGTTTTGCATTATGATTATGTGTAGAGAGATTGCTATTGGAGCACAGGAAAGGTTAGGTTCATAAATGGGAGTTTGAAATCTTCTTGAGGTACCATGGATACATTAGACTTAAAAAAAAAAAAAAATTCTCAACACCCAGATGTAGAGTCAGGTTCTAGTAAATTCAGTTAGTCCAAGTGGATACAGATGAAATTAAGTATCATAACCTAATGTCTTGCTAATTCTCCTCCCCACAACTTAATATATTGCTGCTGC EMBV3_29126 GATGTCTTTCCTCGGGACGGCCCACTTTTGCTTTCCATGGCTAGTTCCCAATAAAGTCCA Gene BVT0102_006592 - 0 NULL GK000028.2:15505128-15582049 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160192 TCONS_00160193 TCONS_00160195 TCONS_00160194 1 XLOC_097606 Coding TCONS_00160195 XLOC_097606 Coding Coding LOC522998 28:15577783-15692940 j TSS119871 6090 1 TCONS_00160195_1 325 0.0354679802955665 9 0.947193372468651 0.00942628641416262 0.00676065358853577 0.00744904302859941 0.00480285170654198 0.00457023952955027 0.00337977138986604 0.0030282534504524 0.0061302007906985 0.00579360816000391 0.000920715843441169 0.000140693937768211 0.000294394476376233 0.000571268297768541 0.000616502922287567 0.000868685910339386 0.00595142550831481 0.0028781080795435 0.00138237719808145 0.00325352767498686 0.000888916601770351 0.00215673496613846 0.00250591029265095 0.00229213505975085 0.00293318374279237 0.00611660378248726 0.00565266537789232 0.00289372237455252 0.000742578380890425 0.00054876432683761 0.000935131786844057 XM_003587981.2 CCDC6 PREDICTED: Bos taurus coiled-coil domain containing 6 (CCDC6), 0.0 9564 100.00 0.870607553366174 NM_005436.4 CCDC6 Homo sapiens coiled-coil domain containing 6 (CCDC6), mRNA. 0.0 5876 84.57 0.872742200328407 TCONS_00160195_1 sp|Q16204|CCDC6_HUMAN CCDC6_HUMAN Coiled-coil domain-containing protein 6; 0.0 655 98.77 0.996923076923077 1 coding 0 0 0 0 -1.50027352216896 0.0187881676208286 -0.525731816036076 0.0001015279502345 GTTAAGTCCTCTCTTTGAATGCAGTTGGTGATAAAGCTAAGAGAAAGGCAACTTGTCTCCTGAGTGTTTCTAACAAGCCCGGGCTGAGCAGGAAGAAGAATTCATAAGTAACACTTTATTCAAGAAAATTCAAGCTTTGCAGAAGGAGAAAGAAACCCTTGCTGTAAATTACGAGAAGGAAGAAGAGTTCCTCACTAATGAGCTCTCCAGAAAATTGATGCAGTTGCAGCATGAGAAAGCTGAACTAGAACAGCATCTTGAGCAGGAGCAGGAATTCCAGGTCAACAAACTGATGAAGAAAATTAAAAAACTGGAGAATGATACCATTTCTAAACAGCTTACCTTAGAACAGTTGAGACGGGAGAAGATTGACCTTGAAAATACTTTGGAACAAGAACAAGAAGCACTAGTGAACCGTCTCTGGAAGAGGATGGATAAACTTGAAGCTGAAAAGCGAATCCTGCAGGAGAAATTGGATCAGCCGGTGTCTGCTCCCCCATCGCCTAGAGACATCTCCATGGAGATCGACTCTCCCGAAAACATGATGCGACACATCAGGTTTTTAAAGAATGAAGTGGAGAGGCTGAAGAAGCAACTGAGAGCTGCCCAGTTACAGCATTCCGAGAAAATGGCGCAGTATTTGGAGGAGGAACGTCACATGAGAGAGGAGAACCTGAGGCTGCAGAGGAAGCTGCAGAGGGAGATGGAGAGAAGAGAGGCCCTCTGTCGACAGCTCTCTGAGAGCGAGTCCAGCTTAGAGATGGATGATGAAAGGTATTTTAACGAGATGTCTGCACAAGGATTAAGACCTCGCACTGTGTCCAGCCCGATCCCTTACACACCTTCTCCCAGTTCAAGCCGGCCAATATCACCTGGTCTCTCATATGCAAGTCACACAGTTGGTTTCACGCCACCAACTTCACTGACTCGAGCCGGAATGTCTTATTACAATTCTCCAGGTCTTCATGTGCAGCATATGGGAGCATCCCATGGTATCACAAGGCCTTCACCGCGGAGAAGCAACAGTCCTGACAAATTCAAACGGCCCACGCCGCCTCCGTCTCCCAACACACAGACCCCCGTCCAGCCGCCGCCGCCTCCACCTCCACCACCCATGCAGCCCGCGGTCCCCTCGGCAGCCACCTCGCAGCCTGCCCCCTCGCAACATTCGGTGCACCCTTCCTCCCAGCCTTAACGCATGTGCTTAGTCCAGACCCCACCTGGGGACTCGTTCATACAGTGGAGCCGTCGACTTGACGCCAAAGGCTTCCTTCCCTGGCATATTCGGATCTGACTTATTTGCACTGAGGTTATCTAGGCTTCACCATTCATTGTGTTGTAAATGTGTGTCGGAAACGCAGCCAGTGTTGTGGGTCTACAACACTAAACAGACGACTTTTTTCCATCGGTGTTCTACTTGAATCTACATGTGCGTCCATTCCCTGGCTGGGACCTCGGCTTTTCGACTCTTTGGTAGTTAAGCAGCAGTGTGCAATTTTTCGCTTGGCCCCCAGAGCTTCATTTTCCTGGCTTTTAGGTTTGTAAAATAAAAAGGGATCTCTTTTTTATATTTTTTTCCATGAATTTGCAGGAAATTACTGAGCTGTTATGACTACCCCCCACCCCCCATTATAATGGTGTTTACCAAGCAAACCAATAATTCAGCACTACAGTTCAGACCTTTGAAAATCTAGCTCTCAGTATAGAACAGAAAGTTAGCTGGATCAGTGCCCAAGATCATGTTTAACAGAGCTTTCTAACAGATACACTTTGTATGGGGTATGTTCAGTATATCTCAACACCCACATCTCTTGTAAAAGAGGTCACCTAAAGTATTGGCTCACATGGCTGTATCTTTTCCATATACGTGGGATGGATAATTATTGTATATCTAGGTGTGATTCTGTCTTTACCCTTGATGTTAACCTACCCACACTAGCCCCCTCTCCTGTGAGTTGCTAACTACCCACCGGTGGTTGCGATGGCTGATAAGAACGTGCCGTGTGATTTCTGCTGCCAAAGGCAGTGTGATTGTAACAAAAACAGCTATTTTCCCTTTCCATTCTTTACTTGTGTTCCCCTAAAATAGACTTCGAACAGATATTTTAAAGGTGCAAAAATACTATTAGAAAAGACTTTGCAATGAACATTATAGGAATACCTTGGTATAATGGCCACAAAATACTTTATCTCTTAGCAGGAAAGAGCTGTAGAGGCAAGTAGCACATTAGCCTTGAGGACTGCTTATTTTGCCCAGTAAAAACAAGTGCAGTGTTCAAAGAAATATATCCTGAATGCGTTATTTTCATTCATTCAGCACAAATAAATTGTTTGGTTTCACTTTAAAGTGGAACACTGAGTCACTCTTTTCTTAACACTTGGAACACCTTTATTTTGGCTTTTCAGCAGTTACTGTTTTGTACTTTGGTAGTAAAGTGATTTTTACCACCTGTGTTTGCATATTTATATATGCTGTGGACGGAAATAACTTACTAGAGAATGTATATTTTATGATGAGAATGTGTATCTGTTGGATATAATCGGAGAACTGAAAATTAATTTATCCATAATTTTTAAGAGTCCATGTTTTGTGACTACCACCTCTCATAGCTAGCTCTTTACTGACCACACTCCTAAGTATAAGGAACCATAACATTGTAGATACTTAATATTGTACAGTAGAGAAACCTCCATTTTTGCCTTCAAATGCATATTTAAGAGTTACAGAATGAGAAAAAGTCTTGTTGGCTAATAGTGTTTGACTAGCATCTTAAGAACTTGAAAGTAAAAGCAACAATAGGATTTTTTTTTCCAGCTCTTTCAGTTTCCACCCCCAAACTGAGAGCATTGCTCCTCAATTGTTTGAAAGAAATCATAAGTCTATATAAATTTTATTTATAATGTGTAATATACATAATCATAGTACAGTTCTCAAATACGGGGAAGAAGTTTGGCATTTGATTATTGAGGCTTGAGGTTTTTAATTCAATCAGATGGGGTCCTGTCTGACCTGGGTATTTCACCAATGGCTCACTGTCCCTCCTGGTATCTGGCCATTTTGAGGAATTCTGAGAGCAGGCAAACAGGTGTTGCCTGCATGGTACAGTTCTCAGTTTTTCTTAGAGGAGAAATATGATCTATGTTTACAAGAATTTTCTACAAGACTGTAGGTTTCAGTGCTGTTGGATAGAGGGTCTTGCATTCAAACAAGAGAGTCTAAAATGTAATGATCTTCCCTCTGCTTGCTAGCAATTTAGCGATCTCCGGAAAGCACAAAAGTTAACACATTGTCCTATGGTGACTGAAAAAGCACTTGGAGGAGCAAACAGTTCTGATAAATGCCTTCTAGAGACAGTCCTTAACATTCAGATTTCTACAGGAAGGTGACGCCAGTTTCCCTAGACTCGTCATTTCATTGCAAAATGATACACAGCTCCTTCAAATAGCACTTTTTCACTGTAAATCTGTTGCCTCTCCCAGTGGACATTCTGGATTGATAGAACAAACACTACTCTTCTGAACTGATGCCATTCTGGGTCCTGTTGGAGTGTTTTGTATCCCCGTGGGGAGCCTGTCACACTTGGGGAGTACCTGCTAGGGCAGCTCCTTGGCAGTTGTTTAGCCCCCAAGGACCCCAGAGATTTCCACGTCAAGAGCACAGAGGCAAAAGCCCCCTCGCCCACAGGAAGCTGACATACCTGGAGCATGTCTTTGGGGGGCTGAATGCAGTTTCTGCTGTTCCTGTTGCCCACCCGCAACCCTGGACTGACTCCCAGAGGCCTTGGAAGGCAGGTGGGAGGCACAGCAGGTTCAATAGCTTCGTTTTCCTGTCTCACTGACAGAGACCCTTGGCTATCACTGTGCTGCTAATAGAGTAAGTACTTGTCGCCAGATGACCATGCCTTTTATTCAAAACCAAATTACTTTCCCTGACACCTGATGCCTCTCTGGGCTCTGAACTGCTCTCTGTCATTCAGCATGCTGGCTTTCTAGACAGACTTCTAGTGATGTGGCAGATGGTGGAAGTATTTAAGATTTGATCTAACTCACTCCTTTGTTCTTTGAAAGGAGTTTGAAATTTTGAGCTCCTGAGAGCCTGACCACAACCATGGAATGAATGTGTGACCAGAATGTGGCTTTGACACCAAGTGCTGCTGCCGCCCCTTTGTAATTGGCTTCTCACTGATTTGACCAGAAATAATGGATAATGTGAATTTTTGTTAACTGTTCCAATTGTAGAAAGATAGAATATGTTATCGCCCTTTGTTAGGTAGACATGAACTTTTCCTGCACGAAGCCTTGCTTATAGAGGATGCCCTTACAATAAGGCAAGAAAAAGCATAGTAACTTGTGCTTGGAGAGCTCACTATTTTTATCTTATCGATACAGAAGAAATAATTTCTGCATAACTTGATTCTTCTATCTAGTACTTGTATTATAGGTAACCAACACTGATAACTTTGTAGTGATGACTACCAAAGAAATGCATAGTAAAACAACCTTTTATTTCCAAATTACTAAAGAGCCAGCCATTGACGCTGCTACGTGAGTTCCATGCTCAAGAGCCATTGTAAGAGATTAAGGGGTTTTTAGGTTTTGGGGTTTTGTTTTGGTTTTGCTTTTTTTGTTGTTAGGGGTGTTTTTTTTTTTTTTTTTTTTTTTTAGTTTCTTTCCTTTTTCTTTCTCTCTCTCTTTTTTTCTTTTTTGGATAAAACACACACAGCTGTTAGGATAAAATTTTAGGGAGCATGTTCCAGAGTGCTCAGCAGTTGCGGTTAACTGCCAAGCCCTGGTTGCCTCTTGCTAGGCAATGGAAGGAATCTTCTGTTCATGATAGTGTGGGTGATGTGTGTGTGCAAGCGTGTGTGTGTGCATTCATGCCTTAACTGGGGTTACTGCTCAACTTTAGTTCTTGACCTAGTCTGCACTGTCGTCTAGATTGTATTGTACATCTCGATCTGAACTTCATCCTGGCAAAAACAAAGTTGCAGGCACAACAGTTTGCGAGTGCATTCCTCCAGCAGAGTGTTGGATCAGGTTGACCCTGAGCCTTCTTTGGACTTTATTGGGAACTAGGCATGGAAAGCAAAAGTGGGCCGTCCCGAGGAAAGACATCAGCGAGGAAGAGGAGAGAGCCAAGTGCTAGCATGTCTTCGGCCTCTGCGTATCTGTGCACACTGTATGTCGTTCATAATAGCTTGTCTACAACTTGACTAGGTTGGAGTTCTGCTAATAGTGGCAATCTTGACATTTCTTGGTCAGAATTTAGAGAGATGTAAGACTTCCAATTAATGTCTTATTTACTTCTTTATGTTGATTAGCCTTTGATACATGTGCTGAATCAGAACCTAAATAAAGATAATTTTTTAAAATGAACCTCTTGAGCCTTCTACCCTATCTCTTTCTTTCTGGTCTTTGAGTCAGAAAATGAATATTGTTTCCCTGTGGCTCCTGATAGATATTCGTCTCGGATTCTGAATACTGAAGGCTGCCTTAGAAGGTAAGCTTAAGAAGAGGAAACAAAAGAGACTGGTACTGCTCTGTTTCTTAATCAGGATGCTGGTTATCTGGATGTACTGAGGTTTTGAAACTACATTGAACTGTGAGTTTATGATCTGTGCACTGTACTATATATGTATATGTGTTGCATTTCACTTGAAAACCATAAACCTGGGAGATTATGAAAAGGAAAGAAAAACCGCACTCATTCTCAAAATGTTACCTATAAACAATAGATACATGTATATACACACACGTGCTAAGTAGCTTCAGTTGTGTCTGACTCTTTTCGACCCTATGGACTGTAGCCTACAAAGGTGATCAGTATACTTGAGAGCAAGGATTTGAGTGGGTGTGGCTCTGTAGTGCCTTTCTCTTCCTCAAGAAGATAAAATTTCTGGTCTCAGCAAGAGTGAGGAAGGAACCTCATTGTGGGGCTCCCTGCATTGTAAGTGGAGGGATGGGTGTCCTGAGTCCAAGCAGTCTACTCTGTTAGGGAACCTTTGCAGCACTGTGAGCACACAACCTGGTTATGTAATTTCATTACACACACACACACACACACACAAAATATATGTACTCTGTCGCTTC EMBV3_39918 TTGTGTCAGCCTTCATCAGTTTCCTCACAGGTGCCATCTGCCTCATCCAAGAAATAGCCT Variant GeneID:513111|LOC513111:NM_001098021:167_cdna 759^896 2 EMBV3_27127 GeneID:513111 25 GENE LOC513111 NULL hypothetical LOC513111 EMBV3_34016 CTTCTTGCGGGTGTGGTGATCGGCAGTGGAGACCAGGCACTTTTCCCTCAGTTATGCCTT Gene BVT0102_263949 + 1 EMBV3_26733 GK000025.2:877123-958030 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09671 TCCCTGCCCCGCGTCCCGCCTCTGCAGCAGATTTCAACACTAAACTTGCACAATGTCTTT Variant GeneID:535219|CUL2:NM_001076909:130_cdna 119^294 1 EMBV3_25028 GeneID:535219 13 GENE CUL2 MGC143284 cullin 2 EMBV3_13710 AGACATCGCCAATCTTTTCCAAGTTCCCAAGGCTGATGGCTAAGGGCTGGAGAGATGCCA Gene GeneID:509459|CPT1B:NM_001034349:22_cdna Constitutive 0 NULL GeneID:509459 5 GENE CPT1B NULL carnitine palmitoyltransferase 1B (muscle) EMBV3_08826 GGAAGACATCCTGGACTCCCTCTATGCTCTCAACGGGATGACCTTCGACTTGGACCTGCT Gene GeneID:523588|RUFY4:NM_001102081:98_cdna Constitutive 0 NULL GeneID:523588 2 GENE RUFY4 MGC157327 RUN and FYVE domain containing 4 EMBV3_24710 GGTCACTGGCAAACAGTCAGTATCTGCCTCTTTTAGGTCAGAATATGCTATAAGTAGCAG Gene GeneID:523962|MAP3K1:XM_002696321:56_cdna Constitutive 2 NULL GeneID:523962 20 GENE MAP3K1 NULL mitogen-activated protein kinase kinase kinase 1 EMBV3_00559 CTCAGCTGCCTTGTTTACCGAGCTGATACCCAAACTGTTCATACCTGCTTTATAACATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27369 AAATGTGTGGGACGGGAACAAGGCAGTGATTTCCTGACCCCTGAAGTGAATGTGTGGGGT Gene GeneID:616996|CCL22:NM_001099162:444_cdna UTR3_Alt 1 NULL GeneID:616996 18 GENE CCL22 MGC152608 chemokine (C-C motif) ligand 22 EMBV3_16768 TGCAGAGAGAAACGAGCAGGGTGGGCCAATTGTAACCAAAAAGCTTGCCGGAGCAGTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04835 GCTAGCCCTCGGGGGAATCTCCATGCTCTGCATCACTCTAGAAACCTTGACCTCTAACTT Gene BVT0102_059875 + 1 EMBV3_13845 GK000005.2:115060314-115084015 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33363 GCAGAACCATGCTATCGCCGCCACTGCGTTCTCCTTTATTGCTTCAGTGGTTTACGCCAT Gene GeneID:531169|LOC531169:XM_002707889:43_cdna Constitutive 0 NULL GeneID:531169 21 GENE LOC531169 NULL similar to myeloid-associated differentiation marker EMBV3_21377 CTGACAGCCTCATTGGGCCAGATACACAGGTTGGAGAGAAGTCATCCATTAAGCATTCGG Gene GeneID:534063|EIF2B3:NM_001083474:221_cdna Constitutive 0 NULL GeneID:534063 3 GENE EIF2B3 MGC142785 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa EMBV3_27126 ACCGGACAGAGGAGGAAGAAATCTCGCTGATCCACTTTTTCGGAGAGGAGTACCTGGAGT Gene GeneID:785548|LOC785548:XR_083883:602_cdna Constitutive 0 NULL GeneID:785548 16 PSEUDO LOC785548 NULL similar to Protein-S-isoprenylcysteine O-methyltransferase (Isoprenylcysteine carboxylmethyltransferase) (Prenylcysteine carboxyl methyltransferase) (pcCMT) (Prenylated protein carboxyl methyltransferase) (PPMT) EMBV3_12687 CTATGGGAGAGGCTATAGCGGTAGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTT Gene BVV0102_273130 + 0 NULL GK000005.2:120264938-120500154 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202228 1 XLOC_123873 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_25530 CCACTCACATTTCTGTAAGATAGCGTGGTATAGACCCTCGGTGCAAGCCTGAGAGGCAGA Gene BVT0102_239102 + 1 EMBV3_26496 GK000026.2:18719927-18732856 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00153352 1 XLOC_093116 NonCoding TCONS_00153352 XLOC_093116 NonCoding NonCoding - 26:18727589-18732433 - TSS114522 4844 1 TCONS_00153352_9 151 0.37056151940545 1 0 0 0 4.77600996757972e-07 0 0 0 0 0 1.62884653433541e-06 0.000222967116312154 4.48952548004072e-06 0 7.29758410916096e-05 3.88439289464893e-06 3.44365679106956e-05 0.000880571197047627 0.000226778988144982 0.000176112786459932 0 0 0 0.000350546405158337 9.84826891553247e-05 0.000214576361011515 0 0 0 0.000210339860029262 4.00875619255425e-05 7.13675376779027e-05 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 1e-90 340 82.72 0.0639966969446738 0 noncoding GAACCTCCAGAATCCCACCCAGCTCCATTCAAAGGAGACCCCCCTACCCATCACCCCATGGCCCTTGTTCCTGCAGGCTGGTGGGAGCCATGTGGAGAACAAGCCTAGAGACCCACAGGTGAGAATGTGGGTTCTGGCCTGGCTCACAGAGCTCTAGTAGAGCCCCCTGTCCTGCAGCTGTGGGGGACTTCCTGTTTAGGTACCATCCCAGTGGTGCAACAGGCTGGATTGTGAATCAGGAGACCTAAGTTCTAAATTTGGTACTCATTTCATCAACCAATTGTGTGACCTAAGGCAAGTCACTCACTCTCTCTGAGTCTCAATTACCCCCTCCAAAAAATGAGAAGCCTGGAGCAAATATTCTTTAAGGTCTCTTCCAGCTCAGGCATGCTCTTATAGCATAATGCCAGTACACAGTACATGTTCAGGAAATGTTTATCTAGTAATTTAACTAGATTTAAGGCAGGATTCTCTAGGTGCCTGCACCCATGTACTTTCTTACTATGCTTTTTGCCTCTGCTGTTAGCTGATTTGGGTCAAGTGCCAGCTTAGGGCTTGGGACACAATAGGTGTGAGTTGAGTCTATATATACGGTATGTTTACAGTCGCCCAGAGACTGAAGACAAAACAGAATCTGACTGTGAGCAGCAAGAGCTAGTCCTAGGATGTCAGGGTGGGCTCTGTGGTCCTTCTTGTTACAGGTCGCCTCATTGCATCGGGGCTCAGAGCAACTGTCAAGTGTCACTGCTTGTTCCCTAAACAATCTGGCCTTACTTTGGCTCACAGTGCTCCTTCTGCCTGGAACACCTGTCAGGACTTATATACTCAATTTATAAGCTAATAAGCTAATCTGCTGTTGTTTCATATATACCGGCAGAAGACACAGGATTCCTGGGTCAGAGACAAAGGATTGACCGCTGTTGGCATAGCAAGCAACATTCGCACGGTTGTCACACATCTTTCTCTGGTTTTCAAGTTTCACGGGGGCACCACGGAGGGGCCCAGGTGGATGTTACACATGCAACAGGTTTGTATCATAGCTGAGGAGCACTGAGCTGGGAAAACCCACCACTGTCCCCTCCTACCTCACCACTTTTATCATAAGCAATAAGCAAGTCTGCTCTGTGTCTGGGAGAAAATGTTCCTTCATCCCTCGAAATTCCTGACTGCAAACACAGCACTGAGAAATGATGGGGGAAAGAGCAGTCATGGCCTTGCATTCTCAGCATACATGCCTGGTGATAACACTCAAAGAGGCTCAGGACCTGCCTGATGGGGAACTGCCTCGTCCAAGACACCTACCCTCCACCTCTGCTTGTCAAAATCCCATCCATCCTCAAATGACACTTTGTTTTTGAATCTTTCTCCAGCCCTCCCACCACCAACACTTTCCCTTTTGTATTTTCCTTATAATTCTCGTCTACGTCTCTTTGTTGTGTCCACAACTGTCCCCCTCCTACCAACAGAGTGCAAACACTTGGAGGGCAGGCCTTGGTCCTCTTCATTCCTGTATTCCACACCCAGCTCGTTTGCATCCATTGGGTGCTTAGACTGTATTTGTTGTGTTGGAGGTATCTAGATCTTTGGGCATGGTTATGCTTCTGCAAAGTCTGATGGACTGCCTTTTGGAATATTTTCAACATTCCAGAGGCTAAAAATACCTCCTCAAAGCTGTCAAAGATGTTTCCTTGTAAGGAGTAGGATTTGCCTCGTGAAGCCCAAAGTTTATGTCCACCAGGTGGCGCCCCACCCCCAACTCTCCAGATGCCTTTTTTAGAGGGAAGGGATTCTCTTGTCTGCCTCTAAATGTTTGTTGGCTTAGGTCCCCCACTTACAGAGATAGTTTTGTAGCGTAATTCCCTGTCACTGGTCCAGCACAAAGATTCAGCGTTCAGCTGCGCATTCTAGTCCCAGCCCCACTCAAGACTGGCACCCTGAAGACACTGAAGGATGTCTCTCCAAGGGTTGCTCAGGGATGTTGAGGGAAAAGACCCGAAATCGGGGCTAGAAGACCTAGGTTTGAGTCCCCACACTGAGTAGCTGTGTTTCTTTGGGTAAGTCCTGTAACCTTTCTGGGTCCCTGTGAGAGTAGCTGAGAATTAAATATGAGAAACTATATAAAAGCACACTGAATGTGGACCTGGGGTCAGCCACACCTGGGCTGCTGTTTAAACCTTCACCCATTAGTTCTGTGACCATGGTCCTCTTCCTTATCCCTCTAAGCTTTGGTTGCCCCATCAGTGAATCAGAGTTAACACCAGTTATTTTACTTATTTTATAAAGTATGTTTATTTGGCTGCATTGGGTCTTAGATGTGGCACGTGGGGTCTTCGATCTTTGTTGCAGCAGGTAGGAGCTGTGGTTGAGGCACGCTAACTCTTAGTTGAGATGTGAAGGATCTAATTCTCTGACCGGGAATTGAACCTGGGCCCCCTGCATTGGGTGCTAGGAGTTTTAGCTCCTGGACCCCCAGGGAGGTCCCAATACCAGTTATTTAAAGAGTTGGTATACGGGACTTCCCTGGTGGTCCAGCGGCTAAGACTTCACGCTGCCAGTGCAGGGGGCCTGGGTTCAATCCCTGGTCAAGGAACTAGATCCCACATGACACCACTAAGACCCAGTACAGTCAAATAAAATAAATAAATAAAATTAAAAAAATAAAAATAAAGAGTTGGTATAAGGATTAGATAGCACAATAAATATGATGTAATTTATTACTAAGCACAGTAATGCTTAGCGTATAGTAAGCATTCAATTCATAACAATCACATATATATTATGTATCTCTAACCCCTCAAATAGTGCCAAGCATTACTAAGTGCTAACACCCATCTGCTGAATAAAAGGATTTCACAGATGAGGAAACTGAGGCACAAAGAGGTTAAATCACACACATACACACACACAAACCACCTCCCAGCACTAGGGAGTGGTGAGGCAGTGAGAAGTAGCCCGGCAGTCTGCCTCTCAGGCTTGCACCGAGGGTCTATACCACGCTATCTTACAAAAATGTGAGTGGTATACACACCATTTTTTAATTTAAAATTTACATTTGGAGTTTTCTCAGGTACCTGTAGGTGGGGCTGAGTTGGCAGTGGGAGGCATTAGCTCCCTGAAAACCATGTAGCTTTTCCCTCAAGGGGAGCCAGGGACCAGCAATCTCATCCCATGACTGAGATGAGGGACAAGCTCTGCAGGGTAGATAAGCTGGACGTCTTATCCAGGCACACTCCCCAGGACAACAGGTGTCTTCTCACTTCCACTGCCGTGTCTGCAGCCACCCAGTCATCCACTCCATGGATATTTACTGAATCTCCTATGTGCCAGGCACCCGCAAAGATGGATAAGATGGAGCTGACTTAGAACTATGCTGAGGGACCCTCCAATGAGGTGCCTAGAAGAGCCAACAAACCAAAGGAAAAACATTTAAACTGGGCATTGAAGGTTAAATAGGAGTTTGTCAGCCAAACGGGGTCTGGGATTGAAGCGCTGCTGCTTAGTCGCTCATCCATGTCCCACTCTTCTCGACTCCATGAACTGCAGCCCATCAGGCTCCTCTGTCCATGGGGATTCTCCAGGCAAGAATACTAGAGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGTCTCCTGCATTGCGGGTGGATTCTTTACCATCTGAGCCACCAGGGAAGCCTAAGAATACTGGCATGAGTAGCCTGTCCCTTCTCCAGGGGATTTTCCTGACCCAGGAATTGAACTGGGGCCTCCTGCATTGCACATGGACTCTTTACCAGCTGAGCTACCAAGGAAGCCTGGGATTGAAGAGCCTATTCCGGAACCTTAAGAGGTTTGATGCGGTTGGCATACTGAATGTGAGCATGGGTAAGAAAAGGAAGAGGGAAACCAGGAAATTGGGAGTCCGTTGGGGCCAGATGAAACATGTGAAACATGTCCATAGAAGAGATAGAACCCTATATCCTGTGGTCAGCAGGAAGCAGTGTATATACACAACCAGGTCTGTATTTTAGAAAGATGCCACAGTGCATGAAGGTTAGTTCATAAGAGGAGGGAAGAAAGACCAGCAATAATTACCAGCTTCGTAGTCTTAACCCCTCTAGGCTTCCTTTTTCTCCTCAGCAAGATGAGAAAAATAATGGTATGTATCTTATGTGCATGAGTGCTAAGTTGCTTCAGTCGTGTCTGACTCTTTGTGACCCTATGGACTGTAACCCACCAGGCTCCTCTGTCCTTGGGATTCTCCAGGGAAGCATACTGGAGTGGGATGCCATGCCCTCTTCCAAAGGATCTTCCTGACCTAGGGATGGAACCCATGTCTCTTATGTCTCCTGAATTGGAAAGTGGGTTCTTTACCACCAGCGCCACCTGGGAAACCCCTGTATGTATCTTTGGGGGCTGTCAAATGAGACTTCATAAATGAGAATTTCTGCAAAGCACCGTAATAGCAATAACGTAAAGCATTGTTGGGCTTTGCTATCTCTTAGAGCTGGGTTTGTGTCTTGGTCGTGCTGGGAAGTCTACTTTTAGTACACTTGATGGCAAAGAAGGCTGGAAAAGAGATTGGACTAACTCGGACTTTGCTTTGTGCAGTGGGAAGCAAAGTGGAGGCCTGGAGTGGGTGATGGTCCCTTTCAATGACAGAAGGACTCAGATGGCTGAGTCCAAGTCTGAGCCCAGCTTTAGAAAGAATAAGTTTGAGGTGAGCACTAGCAGGGTATGATACTCCGATGTCCAGGTGAGAATAGGTGGCAGCTTAAGCCCAGCACTGCTCTGCTCCCTCGCCAAGGAAGGGCCGGGAGGCCCCAGCGGGCTGCCGGACAGGAGAGAGGAGAAAG TCONS_00150323 TCONS_00150324 . 5' 424 TCONS_00150323 TCONS_00150324 . 5' 424 EMBV3_10879 TCTTGGTTTTCTGTCCCAGCTGATGTTGCCCTGTTTGGAGGACAGCTAAGGCCCCAGAAT Gene GeneID:407769|C7H19orf10:NM_001001164:173_cdna Constitutive 0 NULL GeneID:407769 7 GENE C7H19orf10 C19orf10 chromosome 19 open reading frame 10 ortholog EMBV3_21934 GTCATACTCCAAAAGGCCATGTTGGAAAGTCTCTGTAAGTACTGAGATGATGCTCCAGCG Gene BVV0102_383525 + 0 NULL GK000014.2:38614753-38717375 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15686 TGGTTCGTCGGAGCCACTATGAGGAGGGTCCAGGGAAGAATATACCATTTTCAGTAGAAA Gene GeneID:100297413|LOC100297413:XM_002695671:184_cdna Constitutive 0 NULL GeneID:100297413 19 GENE LOC100297413 NULL similar to cytochrome c oxidase, subunit VIIc EMBV3_21561 TCTCAAGTGCACATGGAACATTCTCCAGGATAGACCACATCTTGGGTCCCAAATCAAACC Gene BVV0101_049910 + 1 EMBV3_12381 GK000030.2:143387644-143414329 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00255180 TCONS_00064131 TCONS_00197118 TCONS_00110709 TCONS_00089664 TCONS_00056852 TCONS_00238555 TCONS_00200093 TCONS_00175170 TCONS_00148299 TCONS_00039848 TCONS_00030151 TCONS_00125060 TCONS_00098305 TCONS_00240900 TCONS_00047307 TCONS_00150015 TCONS_00091705 TCONS_00198315 TCONS_00188671 TCONS_00234388 21 XLOC_158112 XLOC_038857 XLOC_118781 XLOC_066611 XLOC_054447 XLOC_034655 XLOC_145222 XLOC_121745 XLOC_104953 XLOC_090181 XLOC_023665 XLOC_016406 XLOC_076602 XLOC_058551 XLOC_147564 XLOC_027443 XLOC_091796 XLOC_056478 XLOC_119970 XLOC_114712 XLOC_143866 Coding TCONS_00150015 XLOC_091796 Coding Coding - 26:11532247-11538792 - TSS112494 4178 1 TCONS_00150015_12 124 0.804451890856869 2 0.361858190709046 0.00219104243493564 0.00239427836847623 0.00133228330166534 0.00108337864064317 0.00191634899179236 0.000599557657688176 0.000422547098469683 0.000972850273330613 0.00268063347121649 0.00045951830552785 0.000209851295959926 0.000276757690138394 0.000146966585080107 0.00257225408342361 0.00223750057224574 2.52863210193486e-05 9.93435840833436e-07 0 0.000194377467486132 0.00121598844531343 0.000449104245415371 1.7761303169157e-07 1.97621878965974e-05 8.02520154466831e-06 0.000963712857351226 0.00152854017732444 0.00180612813561353 7.12686678386746e-05 4.76397700842662e-05 0.000115121990512847 NM_001191412.1 RPL21 Bos taurus ribosomal protein L21 (RPL21), mRNA. 0.0 951 91.78 0.159406414552417 NM_000982.3 RPL21 Homo sapiens ribosomal protein L21 (RPL21), mRNA. 0.0 677 88.13 0.128291048348492 TCONS_00150015_12 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-37 136 52.46 0.975806451612903 0 noncoding CTGGTTTCCCTGGTAACTAATGAGCCCACCTGACATCAATTCCACTATAACTGGTAACTTCCCTCCCCTCTTCCCCTGGCGAAGACTGCCACCACATTCTGCCGCTTTCTGCAGCACACTATGAAGTGTCGCTCCAGGACCTTTCTTCAGATGTGCTCTGTGAAATACGTTGCAAGGTATATCTGTCTGCAACAGGACAGTCTGAACATTGCTTGCCATTCAGTGCTCACGAAAGGAAAGTATTAAGACTGAGGAGAGTCAAGATTATGTAATTTTTTCAAATTGAAGATTTGTGACAATCTTGAATCAACCAAGTTCATTGATACCATTTTTTCAAACACCATTTGCTCACCTTGTGTCTCTGTGTCTCATTTTGAGGTTAAGCCCTGAGCCTTTGGAGTGGGAGCACTGACTCCAAGACCCTGGACTACCAGAGAACTAACTCTAGGGAGTATCACATATTGAGAACTCACACAAAGGAAACCACTTGAATACAAGACCCGGCATCACCCAACCACCAGGAGCACCCTGTACAGGAAGCCTCATCTAAACAACAAACAAAACAAAAATACAAACCCAGCAGACAGGATTACCACCTCACTCAGCCTTGCCCATCAGAGGGAAAACAAACAAACAAACAAACAAACAAAAACAACACAAATCGCACCCTATATGAAGCTTACACAAACCACTGGACCAGCCTTAGGAGGGCAGAAACCAAAAGGAAGAAAGAATTCAACCTTCAAGGCTGGCAAAAAGAGACCTCAAACACAATAAGGTAAAAAAAAATAATGAAAAGGCAGAGAAATACTACACAAATGAAGGAACAAATTAAAAACACAGAAGATCAAATAAATGAAGAGGGAATAGGCAAACTACCTGAAAACTAATTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAAATGCAAGAATCAATTAACAAAGACCTAGAAGAATTAGAGAATAGACAGTGGGTGATGTGTTTTCAAATCTAGTGTTTCTTCTTCCTGAAAGATGTAAGATAGTTTGTTATTCAGTATGTTCCATTGGTTAATAAACTGCCAGATATTGCCAAAATAAAATTACTACAATTACTACAATTAAAAATACTCTAGAAGAGATCAATAGCAGAATATCTGAAGCTGAAGAGTGAATCAGTGAGCTGGAAGTTAAAATGATGGAAATAACTTCTGAAGAGCAGAATAAAGTATAAAGAATGGAAAGAACTGAGGATAGTCTCAGAGACCGATGGGACAATATCAAAGGCACCAACTTTCGAATTATATGGGTCCCAGAAGAAGAAGAGAGAAAGGAAGGGTATGAGAAAATTTTTGAAGAGATTATAGTTGAAAATTTCCCCAACATGGAAAAGGAAATAGTCAATCAAGTCCAAGAGGTGCAAAGAGTTCCATACAGGATAACCCAAGGAGAAACACACCAAGACACATATTAATCAAACTAACAAAGACTAAACACAAGGAAGGAATATTAAAAGCAGCAAGGGAGCCTGTCGGCTGGAACCACCATCTTCCAGTAATTTGCCAAAATGACCAACACAAAGGAAAAGAGGAGGGGCACCTGCTGCATGTTCTCTAGGCCTTTCAAAAACATGGAGTTGTTCCTTTGGCCACATCTATGCAAATCTACAAGAAGGGTGATATTGTAGATATCAAGGGCATGGGTACTGTTCAAAAAGGAATGCCCCACAAATGTTGCCATGGCAAAACTTGGAGAGTCTACATTGTCACCTAGCATGCTGCTGGCATCACTGTAAACAAACAAGTTAATGGCAAGATTCTTGCCAAGAGAATTAATGTGCCTATTGAACATATTAAGCACTCTAAGAGCCTAGATAGCTTCCTGAAACATGTGAAGGAAAATGATCAGAAAAAGAAGGAAGCCAAAGAGAAAGGGATTTGGGTTCAGCTGAAGCACCAGCCTGCTCCACCCAGAGAACACACTTCATGAGGACCAGTGGAAAGGAACCTGAACTGTTGGAGCCCATTCCCTATGAATGTAGGGCCTGTTGGGTGTAAGAATAAAGACCTGGACTGTACAAATGTTTCTCTTAATTGAGTAGAGATGTTGTGTCTAAATTCAGTGGGTGATGTGTTTTCAAATCTAGTGTTTCTTCTTCCTGAAAGATGTAAGATAGTTTGTTATTCAGTATGTTCCATTGGTTAATAAACTGCCAGATATTGCCAAAATAAAAAAAATAAATTGCCAAAAAAACCAGCAAGGGAAAAGCAACAAGTAATATACAGGGAAACCCCATGCATTTAATAGCTGATGTTTCAGCAGAAACTCTGCAGGCCAGAAGGGAATGGAAGGATATATTTAAAGTACTGAAAGGGAAAAATCTACAACCAAGATTACTGTACCCAGCAAGGATCTCATTCAAAATTGATGGAGAGAGAAAAAGCTTTTCAGACAAGCAAAAGTTAAGAGAATTCAGTGCCACCAAACCAGCTTTACAATAAATGTTAAAGGGACTTATATAGTCAAGAAATACAAGAGGAAAAAAACATCTACCAAATCAACCCCAAACAATTAAGAAAATGGCAATAGGAACATATATCAATAATTACTTTAAATGTAAGTGGATTAAATGCCCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAAACCCACTTCAGACCTAAAGACACATATAAACTGAAAGTGAGAGGATGGAAAAATGTATTTCATGCAAATGGGAAGCAAAAGCTGGAGTAGCAATCCTCATATCAGACAAAACAGACCTTAAAATAAAGATTGAAAGAGATAAGGAAGGACACTATGTAATGATCGAGGATCAATCCAAGAGGAAGACGTAACAATTGTAAATATCTATGCACCCAACGTAGGAGCACCTCAATACATGACAAACACTAACAGACATAAAAGGAGAAATTGACAGGAACACAATAATAGCAGGAGACTTTAACACCCCACTCACACCAATGGACAGATCATCATAACAGAAAATTAATAGGGAAACACAAGTCTTAAATGATACATTAGATGAGATGACTCTCATTGATATCTTCAGGACATTCCATCCAAATGCAGAAGAATACACCTTCTTCTCAAGTGCGCATGGAACATTCTCCAGGATAGACCACATCTTGGGTCACAAATCAAACCTCAGTAAATTTAAGAAAATTGAAATTGTATCAAGCATCTTCTCTGACCACAATGCCATGAGACTAGATATCAATTACAAGAAAAAAACTGTAAGAAACACAAACACATGGAGAGTAAACAATGTATTTCTAAACAACCAACAGCTTACTGAAGAAATCAAAAGTGAAATCAAAAATTTTCTAGAAACAAATGACAATGAAAACATGACAACTCAAAACCTATGGAATGCAGCAAAAGCAGTTCTAAAGGAGAGTTGATAGCAATACAATCCTACCTCAAGAAACAAGAAAAACATTGAATAGACCACCTAAATTTACACCTAAAACAACTGTAAAAAGAACAAAAAACCCCCAAAATTAGTAGATGGAAAGAAATCATAAAGATCTGAGCAGAAATAAATGAAAAAGAAACAAAACAATAGTAAAGACTAATAAAACTAAAAGCTGATTCTTTGAGAAGATAAACAAAATTGACAAACCTTTAGCCAGACTGATCAAGAAAAAAAGAAGAATCAAATCAACAAAATTAGAAATGAAAAAGGAGAGGTTACAACAGACAATGCAGAAATACAAAGGATTATAAAAGACTATTATGAACAACTATATGGCAATAAAATAGATAACCACAGATTCTTAGAAAAGTTCAATCTTTCAAGACTGAACCAGGAAGAAATAGAAAGTATAAACAACCCAATTACAAGCACTGAAATTGAACCTGTGTTCAAAAATCTCCCCAAAAACAAAACCCAAGGACCAGATGGCTTCACAGGAGAATTCTATTAAACATTTAGAGAGGGGCGAATGCCTATCCTTCTAAAACTCTTTCAAAAAACTGCAGAGGAAGGAAAACTTCCAAACTCATTCTATGAGGCCACCATCACCCTGATACCAAAATCAGACAAAGACAACACAAAAAAAGAAAACTACAGGCCTATCACTGACGAACTATCACTGATGAACATAGATGCAAAAATC TCONS_00149999 TCONS_00150000 TCONS_00150001 TCONS_00150002 TCONS_00150003 TCONS_00150004 TCONS_00150005 TCONS_00150006 TCONS_00150007 TCONS_00150008 TCONS_00150009 TCONS_00150010 TCONS_00150011 s 3' 64536 TCONS_00149999 TCONS_00150000 TCONS_00150001 TCONS_00150002 TCONS_00150003 TCONS_00150004 TCONS_00150005 TCONS_00150006 TCONS_00150007 TCONS_00150008 TCONS_00150009 TCONS_00150010 TCONS_00150011 s 3' 64536 EMBV3_35331 GGAGCAGGATCTCCCTCTTTTCTGACTCACTCCTCCTTTTTCTTCTCCCTCTCAGTGTTG Gene BVT0102_329194 - 1 EMBV3_37996 GK000023.2:28156381-28167349 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134659 1 XLOC_081477 Coding TCONS_00134659 XLOC_081477 Coding Coding C23H6orf136 23:28152660-28160372 j TSS100324 4777 1 TCONS_00134659_10 315 0.0249110320284698 8 0.381532875113474 0.000375898671108985 0.00102417548365326 0.000330659764632556 0.000286829409965631 0.000129618457932225 0.000433560036327499 0.000225438961846682 0.000390760659959306 0.000250274424856827 9.24131231343817e-05 5.69173272396269e-06 1.24046812969169e-05 3.15338707889326e-05 0.000397823466808459 0.000222696966265225 0.000318988556856765 7.71034810888953e-05 0.000239196710500429 0.000427461724011114 0.000315081192807881 4.21136910468172e-06 9.58730331988934e-05 5.80804633282703e-05 0.000215372855589783 0.000900726000318777 0.000341384705324147 0.000483611706235815 0.00013292837816006 2.6938966817607e-05 3.9170929041842e-43 NM_001038178.2 C23H6orf136 Bos taurus chromosome 23 open reading frame, human C6orf136 (C23H6orf136), mRNA. 0.0 2212 99.92 0.25706510362152 NM_001109938.2 C6orf136 Homo sapiens chromosome 6 open reading frame 136 (C6orf136), 0.0 1548 85.92 0.273812015909567 TCONS_00134659_10 sp|Q32KT5|CF136_BOVIN CF136_BOVIN Uncharacterized protein C6orf136 homolog; 0.0 629 99.68 0.996825396825397 0 coding 0 0 0 0 0.0561011392452063 0.855360224934615 -0.00312569220624026 0.946055445519129 AGCAGGAGCTGCTGCGTTCCCTGCGCCTCTGCCCCCCACACCCCACCGCCCGCCTTCTGCTTGCTACTGACCCTGGGGGCAGCCCTGCCCAGCGGCGCCGCACCAGGTAACAGGAGCTGGAGAGTTAGGGAGCCTCAGGACTGTCAGACAGGGCGGTTAGAAATGGCAGAGGGCAGTGTAAATCAGAGACATGAAGCATTGGGACAGGAGGATTGGAGACTTCCTAAGACGTTTTGAGAATATACTGGAAGATACCTGTGGAAATAGTCTGGAAATAAATTACAGTTAAGGAGCAGAATAGGACTTCGGGGGAGCCTAGGGATGCTAGTGCCTAGAGGAAGGTTAGAAAGAACGCAGACCCACTGGTGGGAGGGGCGGGAAATTGTGGTTTAACACTTGCTGGGAGGGGGCAGGGTCTCTGACAGCCTGGGGAGCCACTGGCCCCGGCTCAGTGCCTTGTGTGGCGGGAGCCCACCCCGGCAGGCAGGGACTGGGCCTCTCCTTTATTTCTCTCCCCAGCTTTCTCTTCACCTCTGACTTCTCTTTCTGTTTTTCTCTCCCCTCCATTTTCCCTCTCCCCCTCTCCTGTCCATAACATCCTTCCCCAGTTCTCTTCCCCGCTCTGATGAGAGTCGATACTGATAGACTGCTAACCCCCTCCCCTCCCTGGGAGACCTGGCGAAGGTGGAGACCCTTCTCCCTGAGAACCCCAGACCCAGTCTCCCACTGCATCCCCCAGCATCTAGGGGGACTTGACAAGAACCCGTAGGATTCCCTTTACCCCTTTCTTGGACAACTGGGTGGTCAGGGTCCCAGGTGGCCTAACACTTCATAGCTTTTCTTACCACAGAAAGCAGCCCTTCTCTCCTAACTTGGGCTCTGAACACTCCCACAGACAGCCCGATTTGCTGCCAGGCCTCTTGGTTGGGCAGCTCATACTAATTATCCAGAGAAGCACACTCTTGCTTGCTGTCAGATTCTAGAACATCATGGAAAGTCCAAAGGCCTCCTCTGCCAGGGAAACCTTTGTAAAAGAGTCTTGTCCATGGAATAACTCCTGTAGTCCTCTACACTGTCTGCTGGTAGTTCTAATACTGCTTTGTGCTACCGGCTGCAGCTACCCTATCAGCCTGCTGACGCCAGCCACTGAACGAACTCTGCTTCATAGCAGTCCAGTCAGGTAGGACAGGGACTTACCAGCTCCCCACGGGATCCACTCAACATTGCCAAACTCTTAATCTCCACGTTTCATGTATGTGTTAATCTGTCGGGACCCCTGAGCTGATGTCTGCTGTGGGACTCTAGACTCATCACGCTTCTATAGACACTACCACCTCCCTAGGTCCAGGTTCTCTGAAGGAGTCTGTTTCTTGGCAGTAGATCCCAGCCAACACCCTAGGATCACTCTTAGCCAAGTTTCAGCAGCTAAGCCTGAGTTTCAAGGCTCTATTAGCTCCTGGAATACCCTCTTACATCCATTCCTCCCCGGTAGCTAGATATACTGATAGATTCCTGTCTTGTGAGATTGTCTTGATGATGATGGGGGAACTCTTCCTCTGGCCTTCCTCTCTTCTTTCCTCCATAGCAAGAATCCTCCCCTGCTCCATACCCAGGCTATAGAAATCCTTTCCCTCCCTACCCTCTGGATGTGTGCTAGTTCAGGTACCCCTACTGTGTTCCCCCAAATCCTTGGGAGCAGGATCTCCCTCTTTTCTGACTCACTCCTCCTTTTTCTTCTCCCTCTCAGTGTTGTCTGAATAAAGCGTGAACTCTTTTGTGTTTTTTAAATGGACATTTTCAATGAAAAAACAAACAAACAAACCTTAAGGTCTCAGCCTCGTTTGTGCGTCACCCTGTATTTTCCTGGGATCTCAGGACCTCTGGCCCTCTTCTTCACCTCTGAGATCTGCAGATCTTCCAGCAAGGAGGCTTAGAGCTCCCCTCGCAGGATCTGGTGTCTGCCTGTCCCCATCTTCACTGCTGGATTTTCTCCTGCAGATTCTGTCTCCTCTAATGTAGTCACTGGATCCCTCCATGTAGGCTTCTGTATCTATTCCTCCATTCTCTCCATAAACCTTTAGCTCTCCCTCTAGTAACTCCTACTGTTTACCCAGGCCAGCCCTTGCTGAGATGTTAAGATTTACTAACATCTCTAGGAGCCAATTAATTGCCTTCTGATAACAATCCCCTAATTGTTTCTTGGATTATTCTTCTCTAAATCCTTTGATCTCTTTCTCAAGACAATCCTTTTCCTAAATTCAGCCTTGCCACTCCCTCTTCCCCTCTGGCTAAGATATCCCATAATTAAGGTAAACGTGTTTTCCAACTCAAAACATCAGAGCACCTGGTTCAGCAAAATTTTGCCTTTATGTGAATCCATTTTTTGTTTTTGGCTGCACTGTGTAGCTTGTGGGATCTTAATGTCCCAACCAGGAATGGAACCTGTGCCCCCCGCAGGGGAAGCACAGAGTCCTAACCACTGGACCACCAGGGAATTCTCCTGAATCTTTTTATAACATGATTTCGATCACATTTAACCTTACGGTTAGCACATTGCCTCAACTAGAAATAATAAAGCAGCAAATTAGGACTGCTCCAGAAAACCTTGGGGTATACAGTGCTCTCCCTTCCCTTTTCTGGGGCACAACTTGTATTAAACCCCATAGGAATGATAACTACCCCCTCTCTGTTCCTGTGCTGTTCTTTTATTCTTCTCCCCTGATTGCTCCATACCCACTCATCTTTCATCCTGTAGCCTCTTCCCCATCATTTCACATTTCTTCTACAGCGGGACTCCCCCAGGGCTGGTAGCCCAAAGCTGCAGCTATAGCCGCCACGGGCGGTTGAATTCCTCATGTCCCAATACAGGCAACCAAGAACTGAAGCAGGGGGAACAGGAAACAGAGAATAGGTGTGCCATTGAGGAGCAGGTCTTGTCACAGCATGGGTCTGGGGAGGAACCCATGCACACAGTTCCTCCACAGGCCCAGGTTCCACCAGCCCAGGCTTGGACAATGGGTGGGGACATGTTCAACGCCAGGTTCATTCGAAACTTGCATGAACGTCGCAGCACCAGGCCTTGGTGACCGCAGCCCCCTCTCACACCTTCAAAATCATTATTATTTCTATCTCACACAGGACTTAGTCAAAGCTTGCCCTCGCCGTGTATGTATTCATTCATTCATTTATTCATTCTACAGGCTTTTTTTTTTTTTAAATCAGTGCCAAGTCATTTGTATCTTATTTTTAACCAGAGCAATAAAGTATTTTTTACCACGAGCGTTACTGAGAACTGCGGATGTCGTTATTTCAGTCCCACTCCTCACCCATCAGCGCCCACTTTTGCGCAAGCGTACAGGTGAGAGCCTGAGAACCGTACTCTTAGGCCGCTAATTTACTGCGCAAGCGCCCTGAGGCTGCCTCCGATTCGGCGAGCGCAGGCGCACTTTCTGTAGACCTAGCGCCTCACCGCCTCCCTGGAACCCGCCGCAGTGCGCAAGCGCGCAACATCTCCGTTTCCCTCCCCTCAGCCCCTCACCCCCCCCCCCTTTCCCCTTCAAGAAGCCGGCTCCGGGGCGCGCTCACCCCTGTGAGGAGGCCGGAGGCCGGACACAGGAGACGCTCTCTCCGTTCCCGGAAGATCATGTACCAGCCCAGCCGGGGGGCGGCCCGGCGCCTCGGCCCCTGCCTTCGCGCCTATCAGGCTCGTCCCCAGGACCAGTCTTCTCCATGGGCTCTACCATTCCCACCCCTTTGGCCTCACTCCACAACCACCACTTCTCCATCTTTGCCTCTTTTCTGGTCTCCCCCACCCCCAAGCCCTCCCACCCGACTGCTTCCCCCAGCTCCCCCACTGCCTCTCCCTCAGGTCCAAGCCCTCACCTCACCATGGGTGGTTCTCCCCCCAGGAAAGGGGGAGGAGGGGCCAGGACCCGAGTTACTTAGCGGCTGCCTGGATGGGCTCAGGAGCCTGTTTGAGGGGCCTCCCTGCCCCTGTCCTGGAGCTCTGATACCTTTCCAAGCCCCTGGAACCGCCCACCCTTCCCCTGCCACTCCATCAGGAGATCCAAGTATGGAGGAGCACCTGGCTGTCATGTATGAGAGACTGAGACAAGAGCTTCCCAATCTCTTCCTTCACTCCCACGACTACACTCTCTACTCATCGGATGTGGAATTCATCAATGAGATCCTCAACATGCGTACCAAAGGCCGGACATGGTACATTCTGTCACTGACTCTCTGCCGCTTCCTGGCCTGGAACTATTTTGCACAGCTTCGGCTGGAGATTCTGCAGCTGACACGCCACCCTGAGAATTGGACCCTGCAAGCCCGCTGGCGGCTTGTGGGACTGCCCATTCACCTGCTCTTTCTTCGTTTTTATAAGCGTGACAAGGAGGAGCTTTACCGGACCTATGATGCCTATTCCACCTTCTACCTGAATTCCAATGGCCTCATTTGTCGCCATCGCCTAGACAAACTGATGCCTTCACATTCACCCCCCGCACCTGTGAAGAAGCTGTTAGTGGGAGCCCTGGTGGCTCTGGGGCTGTCGGAACCAGAACCCAACTTACACCTGTGTTCCAAGGACTGATCAGGAACTGGGGCAGAGGCAGCACTGATGACTTTGCTACGCACAAAAAGAGGCGGTGGAGGCAGCTGAGAGCCTCAGAGCCAGTTACCTCCCCAATTCGCTCTCCTCCTCTACTTTCCATCTCATGCTATGTAAAGCTGCTGTGTAATTTAACTTGTAAATAATAAAATCTACATGAATATATGA EMBV3_31814 CAGGTGGTGCCTGGTGGGGGTCACAGCAAGGTCCTAAGGAGTCACCACTTCCCCAGAAAC Variant GeneID:281513|TAC3:NM_181017:902_cdna 115^223 1 EMBV3_15849 GeneID:281513 5 GENE TAC3 NULL tachykinin 3 EMBV3_38277 GATCTGCTTCAGTGTGTATTTAGGGACACTGTGTTTCCCATTTATCGCCTGCTGCTAATC Gene BVV0101_047007 + 0 NULL GK000010.2:28645180-28765086 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32522 GACCATTTATAACCAGGACTTCAAGACCAGTGCTAAGAACTATGACCTGGAGTTCAGTTT Variant GeneID:523206|MOV10:NM_001075839:122_cdna 223^921 1 EMBV3_27410 GeneID:523206 3 GENE MOV10 NULL Mov10, Moloney leukemia virus 10, homolog (mouse) EMBV3_07246 GCTTCAGGAGCCAATTACCGGATGGAGGAACCCTTCTTCGCTTCAACCAAGCCATCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35637 GCTGAGCCCACCTTCCAGGGAACCGGAATCATGGAGAAGAAACAGAAACAGCATCTTAGG Gene GeneID:524215|STAC:NM_001077962:131_cdna Constitutive 0 NULL GeneID:524215 22 GENE STAC MGC152116 SH3 and cysteine rich domain EMBV3_42267 GCCAAAATGCAGTCCAAGCTGCCCGACAAAATGCAACCCATGCTGCCCACCAAAATGCAA Gene GeneID:493777|SMCP:NM_001008417:40_cdna Constitutive 0 NULL GeneID:493777 3 GENE SMCP MGC133638 sperm mitochondria-associated cysteine-rich protein EMBV3_06890 CAGTATGATCTCAGCTGCCAAGACCAAAAAGAAATCCAACAAAATGTCAGCAGTAGTTGT Gene BVV0102_308919 + 0 NULL GK000001.2:42826103-43053241 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07488 CCGTTATCCAGAGCCACGTCGGATACTCACGATGCCTGTGGACCTGGACTCCTTGTCCCC Variant GeneID:506657|MRPL55:NM_001075276:17_cdna 429^789 3 EMBV3_37368 GeneID:506657 7 GENE MRPL55 MGC137378 mitochondrial ribosomal protein L55 EMBV3_03049 ACACCAGCTGTCTGTATTAGACAAGGTTACCACGTATGGCATTGGTTATTCCCAAGGGAG Gene GeneID:515310|DUSP6:NM_001046195:35_cdna Constitutive 0 NULL GeneID:515310 5 GENE DUSP6 MGC128931 dual specificity phosphatase 6 EMBV3_23889 GGACAGAAGAAGACCTAAACAGACATTCTCCAAAGACACACAGATGGCCAATAGGCACAC Gene BVT0102_410691 + 0 NULL GK000003.2:107724384-108508757 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19034 GCTCATCATAGCCTTCACCTCTACCAGCATCATCCTCGCTGCTCTTGTCTGTCACTGGTT Gene GeneID:537065|KIR3DL2:NM_001098089:1_cdna Constitutive 0 NULL GeneID:537065 X GENE KIR3DL2 NULL killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 EMBV3_13374 TCCGTGGAGGAGAAGCTCCTGGAATACCGCTTCCACTCAGGAGCTGCGGCTAGATGCCAA Gene BVV0101_055052 + 0 NULL GK000016.2:50824447-50847257 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22835 ATTGAGCTGGACCACCTGTGGCTGGAGACAGCGTGTCTACAAAGAGCGCCTGGGCCTCTC Variant GeneID:614570|EIF4E1B:XM_002689011:59_cdna 442^581 1 EMBV3_37476 GeneID:614570 7 GENE EIF4E1B NULL eukaryotic translation initiation factor 4E family member 1B EMBV3_16904 AAAACATGACTTTCTTTCGGTCCCGTCCTTTATGGTAGGCCAGCCTTGAGGTCATCGTGC Gene GeneID:511257|RHOT1:NM_001046082:244_cdna Constitutive 0 NULL GeneID:511257 19 GENE RHOT1 MGC128572 ras homolog gene family, member T1 EMBV3_05585 TTTATGATCAGCCGTGAGACCGAGAACGTCAAGTCCAGCGAGGAGATTGAGAGCGCCTTC Gene GeneID:540108|SPTAN1:NM_001114156:181_cdna Constitutive 0 NULL GeneID:540108 11 GENE SPTAN1 NULL spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) EMBV3_06053 AAATTTGACCTGATGTATGCCAAGCGTGCCTTTGTTCACTGGTACGTGGGTGAGGGCATG Gene GeneID:404053|TUBA1A:NM_001166505:23_cdna Constitutive 0 NULL GeneID:404053 5 GENE TUBA1A TUBA1C tubulin, alpha 1a EMBV3_03298 TATTTCTGCTGAGCTGTCCCTGGATTCAGGGATCTGATCCAGACCCCACACTAGCAACCC Variant GeneID:505735|SEZ6L2:NM_001045927:251_cdna 304^435 1 EMBV3_14093 GeneID:505735 25 GENE SEZ6L2 MGC137627 seizure related 6 homolog (mouse)-like 2 EMBV3_41098 TATTGAGAGTTCAAAAGAGGCATTTCCATGGTGCCTACAAGTCCCTTACTCACGACCAGG Gene GeneID:767954|MGC133602:NM_001077024:129_cdna Constitutive 0 NULL GeneID:767954 16 GENE MGC133602 NULL hypothetical protein MGC133602 EMBV3_23103 ACCGCCCAGGTTTGCTGAACGTGAAGCCCATTGAGGACATACAAGACAATCTGCTGCAAG Gene GeneID:281993|PPARG:NM_181024:4_cdna Constitutive 0 NULL GeneID:281993 22 GENE PPARG MGC139055 peroxisome proliferator-activated receptor gamma EMBV3_02638 TATCCCAAGTGCTCACCATCAACACCACACTCACCAGCATCAACCTGTCCTGCAACCACA Gene GeneID:100336942|LOC100336942:XM_002697304:150_cdna Constitutive 0 NULL GeneID:100336942 23 GENE LOC100336942 NULL nucleotide-binding oligomerization domain containing 1-like EMBV3_07861 GATGCTGTCCAGATCTCAGGTCACTTCCATATCCACCACCTTCTGGGGAACCCCGAGTTT Gene GeneID:540675|KALRN:XM_002684811:217_cdna Constitutive 0 NULL GeneID:540675 1 GENE KALRN NULL kalirin, RhoGEF kinase EMBV3_34796 CTGAATTTAGGGGGACCCATCCTGGGCTGACCTTTGTGTATAGCAGACGCTACTGAAATC Gene GeneID:512467|SP5:XM_002685303:126_cdna Constitutive 0 NULL GeneID:512467 2 GENE SP5 NULL Sp5 transcription factor EMBV3_33164 CTGTTCCGAGCACCCACAAAGGCCTCCCTAGCCAAGACTGAAAACTCAGGTGAAAGTCAT Gene GeneID:100337465|LOC100337465:XM_002697258:475_cdna UTR3_Alt 2 NULL GeneID:100337465 23 GENE LOC100337465 NULL alanyl-tRNA synthetase 2, mitochondrial-like EMBV3_15357 TCGACGGGCTCATCCTGCACCACCTTTTCCGTATCTTCAACAAGGACCTGCTGGCCACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05063 GGGACTTCCCTGGTGGTCCTATGGTTAAGAATCTGCCTGCTTAATGTAGGGGACACACGT Gene BVT0102_115418 + 0 NULL GK000016.2:66898320-66960789 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073792 1 XLOC_045553 NonCoding TCONS_00073792 XLOC_045553 NonCoding NonCoding - 16:66923730-66924108 - TSS55636 378 0.53968253968254 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.98717239149088e-05 0 0 0 0 0 0 0 0.000620910971652799 0 0 0 0 0 0 NM_001135640.1 CNGB1 Bos taurus cyclic nucleotide gated channel beta 1 (CNGB1), 1e-25 120 74.40 0.537037037037037 0 noncoding 0 0 0 0 -1.60407578880995 0.0235422959814747 -0.232363855026074 0.0024010093443013 GGGATTTCCTGGCTTTCCTCCTGGGAGTCAGTCGTCTAAAACGCCAAGAGCAAGTGAAAGAAACATAATCTCTGCTGTTTGCCTGTTATCTCTTTGGTGGATTTGTGTTGCTGGGTGACCCTGCAGTGTCCACCGTGAGTCATTTCTTAAATTCTCTAAGGAAAGGAATGAGGGACTTCCCTGGTGGTCCTATGGTTAAGAATCTGCCTGCTTAATGTAGGGGACACACGTTTGATCCCTGGTTTTCAGCTAAGATCCCACATGCCTTGGGGCAACTAAGCCCGTGGGCCGCAACTACTGAAGCCCCCAAGCATGTGGGCTGCAACAAGCCCTGCCTGTGCTCTGCAACAAGAGACGCTGCCAAAATGAGAAGCCCCC TCONS_00068072 TCONS_00068073 . 3' 18641 TCONS_00068072 TCONS_00068073 . 3' 19018 EMBV3_28146 TTGTGGTTTCTTCTGATTTCTGCCATTGGGGGTATGAGTATTATAGAACAATTAGATCCT Variant GeneID:615803|MEMO1:NM_001076395:38_cdna 522^598 1 EMBV3_34420 GeneID:615803 11 GENE MEMO1 NULL mediator of cell motility 1 EMBV3_05191 ACAGCCAGCGTAGCTGCCTTTGAGGGCCAGGCCTATTTGGCACCCCGCTGTTGACCACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11348 AAAATGTACCTTCTTCCAGATCCTCCACCACACCTGCCAGCGCTACCTCACAGACAGGAA Gene GeneID:534718|STXBP6:NM_001076038:121_cdna Constitutive 0 NULL GeneID:534718 21 GENE STXBP6 NULL syntaxin binding protein 6 (amisyn) EMBV3_01276 GTGGGTGAGTTTATGTAGAGGGCGCACAAGGACAAGCGACACCATCAAAGCTACAGCAGA Gene BVV0102_036357 + 0 NULL GK000017.2:66476792-66557187 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077929 1 XLOC_047175 NonCoding TCONS_00077929 XLOC_047175 NonCoding NonCoding LOC100848990 17:66541474-66542869 = TSS58103 1288 2 TCONS_00077929_2 92 2 0.0774748923959828 0.000660213823315492 0.000251600253098253 0.000805095338026877 0.000419076009413888 0.000288768110452014 0.000660402643713082 0.000313544565625313 0.000245533342565538 0.00191474562580232 0.000405699065693391 0.000158003508141327 0.000246522507204876 5.62496445742296e-05 0.00100818063237929 0.000200786875215858 0.0109981363600873 0.00473492486469996 0.0108362640468318 0.000339616846070422 0.000584895442028671 0.000260441197634381 0.00570232649276845 0.00379640426862676 0.00904669306250625 0.00110543728621863 0.000164102495125019 0.000510628018070221 0.000432531617261546 0.000290220963859732 0.000456819922683912 XM_005217827.1 CORO1C PREDICTED: Bos taurus coronin, actin binding protein, 1C (CORO1C), 0.0 1618 99.78 0.701086956521739 XM_005268762.1 CORO1C PREDICTED: Homo sapiens coronin, actin binding protein, 1C (CORO1C), transcript variant X1, mRNA. 0.0 1002 84.92 0.694875776397516 0 noncoding 0 0 0 0 -1.92352118615425 0.0089248210683108 -0.0242781464650337 0.729070713010675 CAGGCATGCGCTCTGAGAAAATGGAAATGGAGAGGGGTTCCTGCTAACCCAGGAGCGGGGCAGGCCTGGAAGCTCAGTGTCTGGCCCAGGACTAGGCAGCCTCTGGGTTTGGATGCAGCCTTGGAGCCGCTGCAGGGGGCGTGGGTGAGTTTATGTAGAGGGCGCACAAGGACAAGCGACACCATCAAAGCTACAGCAGATGTCTGCTTCCTTCTTGGCCCTTCTCAGTCTCGGTATTCAACAGCACCCTCTGGCCGCAGCTCAGCAGAATGCAGTTAGGACCGAAACGCAAGAGGAGGGAAGCCCTGAGAGGGAGAGCTACATACAGAAGAAGGGAGAAAGGAAGGGCAGGAGCTTCAGGGATGCTGGCGGCGGGGTGGGGGTGGTAAGCTCTGCTGAAATTGACAAGAAGGAACACTCCACAGCATGTGTGGCTCCTTGTCCTGGACACCCTTGTCAAGTATTGACCAAAACCTGAAATATGACATCAAAAGGGATGAAGGCCATAGATTCTATGTGTGTAACAAAACCGCAGAAACACATGCTAGTTTAGGTTAGATTATAATCATCTGAAGCACAGGATAACCAAGAAGCAAAATTCCATTCTGGTACAACCACCCAATTTCTAGAAAAGAGAAAGAAAATGATTCAATATGAGCCTTTTTTTTTTTTTTGGATCAGAAGACTCAATGGGAGGGGAAGGGTGGGAATACGAATCCACGTGATCTTTCAAGTCTTCCTTTTGTACAGTCATTAAGATGACCAGGTTTGTGCTGCAGAGAAGTCAGCACCGTGTGGCTACGGCTCTGTTCTCAGATGAATGTTTATACAAAATAATATCTTATCTTCATTTAGTTTATAAACATACACAGTGCTGTCCCTTTCAAATTAAAGGAAAAAAAAAAAAACCCACACACAAATACTGCAAAGTAGCAAAATATAAAGAAAAAAAAAAGCTACTTTTGGTTTTGGCAACATTAAAAAAAAAAGAAATATAAAAAGCAATGTGGCATTGGTCCCTGTTTGTAAAAAAAAAAAAAAAATAGAAAGAAAGGAAAAAAAAGGTGCTTGGGCAGGACACTGAATCAGAATTGGTTGGGTTTCTAAAATTCAGAATATCTGGGATTCTCAAAGTAGCACTTTTGTCTTTTAGAAGTTCACAAGTCACATAACACTTAAAACATCAAAAAAAGTTTTCTGGTAAAAAGCTCAGCTTTTAAATCACATTTTGTTTCTGCAAATTTGGGAGACGAATTGAGTTCTTACTGGAACGTGGCCTGTCGCTGGT EMBV3_23327 ACCTACTACTGGGGCTTCGCTGCGTGGATGGCCTATTACATCAACCACCCTCTCTACACA Gene GeneID:614105|TECR:NM_001034748:40_cdna Constitutive 1 NULL GeneID:614105 7 GENE TECR GPSN2 MGC127748 trans-2,3-enoyl-CoA reductase EMBV3_19067 GATGAAAAGAGCAAGCCGACCAGACACTGATGCAGTCCTAGTTTTTGTGCTGACCATAGG Gene GeneID:614884|SPACA1:NM_001046545:35_cdna Constitutive 0 NULL GeneID:614884 9 GENE SPACA1 MGC134166 sperm acrosome associated 1 EMBV3_17181 ATTGCCACAGTTCCTGATCATACTTTGCAACGGGCCAAAAATAGCCTGTCTGGGGCTGAG Gene BVT0102_177285 + 1 EMBV3_31479 GK000024.2:1304490-2206520 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07312 CTGCCCCGGAAAACTTGAAGAGCCCTCCAGGGGAGAAGAAGCAACAAAATTGCCGAACAT Gene GeneID:538233|SSH1:XM_002694601:708_cdna Constitutive 0 NULL GeneID:538233 17 GENE SSH1 NULL slingshot homolog 1 (Drosophila) EMBV3_25309 TCCTGTTCCAGGTCATCTTTGGAGCTCTCACTATCTCAGCTCGATGTCTTGCACTCCTAG Gene GeneID:532368|LOC532368:XM_002699299:253_cdna Constitutive 0 NULL GeneID:532368 29 GENE LOC532368 NULL similar to solute carrier family 22, member 10 EMBV3_24604 CATCGCTTTACCAGCCGGGGCCTGGTTAAATGTCTGTACTTTGGGATGTCACAGAAATAC Gene BVT0102_146802 + 0 NULL GK000011.2:99249581-99255600 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029094 TCONS_00026217 TCONS_00029093 2 XLOC_015661 XLOC_014942 Coding TCONS_00026217 XLOC_014942 NonCoding NonCoding - 11:99249950-99255566 - TSS18843 2149 3 TCONS_00026217_4 120 0.172173103769195 2 0.617631344612645 0 0 0 0 3.21634951314905e-05 0 1.54261841805952e-39 0 0 6.09854668173229e-05 1.27950808182216e-05 3.23120788934174e-06 0 2.18837473099005e-06 0 0.00113995652942009 2.29100275941117e-69 0.000163013874680787 0 0 0 1.75479173451739e-05 7.72011804656163e-05 0.000235225084555506 0.000257923098448193 0 2.18109050762957e-05 0.000341353374180232 0.000116077268323917 0.0002322082477887 XM_005213353.1 ZER1 PREDICTED: Bos taurus zer-1 homolog (C. elegans) (ZER1), transcript 0.0 2509 100.00 0.646812470916705 NM_006336.3 ZER1 Homo sapiens zyg-11 related, cell cycle regulator (ZER1), mRNA. 8e-171 605 77.00 0.385760818985575 0 noncoding AGATGAGATGCTCGAAGCCTCAAGAGAGGCAGGACTAGCCCAAAGTGACTCCGAGGTGATAACTTTACCTCCGTCTGTTCATTTTCAGATTTTGCAGACAGGATGAGAGCAGAGTGGAGACAGCCGTTGGAAGCAGGGACCCTGTTGGTCTGTGGCCAGCTGGACCCTCAGTGTCTGGGCACAGGGGTGTGGAGAGACCGCAGAGGAAAAGCAGGTGTTCCAGCCCCATCTGCTACTGCCGAAGAACGAATGCTTTTGAACTGTGGTGCTGGAGAAGACTCTTGAGAGCCCTTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTACTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAGCGCCAATACTTTGGCCACCTGATGCGACTCATTTGAAAAGACCCTGATGCTGGGAAAGACTGAAGGCAGGAGGAGACGGGGACGACAGAGGATGACATGGTTGGATGGCATCACCAACTCAATGGACATGAGTTTGAGTAAACGCCGGGAGTTGGTGATGGACATGGAGGCCTGGCATGCTGCGGTCCAAGGGGTCACGAAGAGTCGGACACGACTGAGCGACTGAACTGACCAAACTGCCACCTGTCCCCTTGGGCCGGGCCCACAAACTGACCCGATGCACCCTCCCGTCACTGCTCTCGCCCTCTAGGCCCAGTGCCCAAGCCAGCCCAGGCCCCCTCTCCATGGCCCCATCCCTTCCACAAAAAAAAGACACTCCGCTTTCTCCACTTTGCACAAAAATGTATTTCTGTGACATCCCAAAGTACAGACATTTACCCAGGCCCCGGCTGGTAAAGCGATGCGATGTGAGCTCTGCCTGGGGTCTGGCACAGGCCATGTGAGCATGGAAGGGAGGGCAGATGGGGCCCGTGTGCTGAGCGGAGGGGCCACAGGGCAGCTGGCCTTTCCCAGGGCTGGGGTGTGGGGGGAAGACCCCAGGGGAAGAAAACCGGGTGCCTCTCCCTGGGCTGCTCATCCCGCCTGTTCTGTCTGGAGGCAGGAATGCCAGGAGAATCGGGGGCACAGGCCCAGGGAAGGAGGGACGAAAAGCCACCCCTTAAGGGCCGCCTATAGTCAGCTCTGCTCCCCGGCCCCTTGTTCCAGACAGGGCCTCCTCCCTGCTGTCGGTGCCATGAGAAGCACCGGAGAAGCATCAAAGTGATGTCAAGGGAGGACCACAAGTTGTTTTTGAGATACATTTGTGTGTCTCACACACTTCTCTGAAACCCAGTGCAGAGGTTTCCAAGGGGAAGCCTGGGGGCAAGGCGGGAGAGGGTGGATGCTGGTCTGGAGGTGTCTGCCTGTGGCCGCCAGGGAAGGCTGGCGTGTGGACCCCCCTGCCCGCGGGAGAGGTGTGGGCTCCTCTGGGCCACGGGGCAGGCAGGGGCGAGTGAGGCAGGCTCAGTTCTGCTGGTGGGGTGCCTGGGCACCGTGGGGGCTGCAGGCTGATGAGGGGTGGGGAGTGAGAGAGCAAGCCCCTGGCCCCCGGAGCTGTTGGCTTCCAGGGCGGGAGGCGGGTGGTGGGGTGCGTAGGTTCCGGGTATGTTTGGCGGAAGGGGCAGTGGAGTCTGCCCGGATTCTGACCAGCCCTGGGCTGGGGCCTTCCACAGCCTGGGGCCTGGTGGGAGACTAGGACGCAGCCTCCATAGCAGCGTGGCCTCAGGCAGGCCTGGCCAGAGGGCAGCAGAGCCACTGGGCGCCTTGAAGGCCCTCTGGGGCTGGGACTGCCTGGACCGAGGCAGGTACGGCTCACTTCCTCACCCCAGAGGCCCACAGCCGGGAGCACCAAGGCATTGGGGAGACCCAGTGGGGTTAGTTTTTAATCCCCAAACCCCATCAGCTGCACCGAGGAACCTAGACGGCGTTCTCGGGCTTCGGTGGGTGGGTTAGGAGGCTGGAGTGGGCTCTTGGGGGCCCCACTGCCTCTCTGAATGGGAAGCGAGGCCAGGGTCGGAGATTACAGGGCACGGGCTGGACACTCACAATGTTAGAGGCATTTAGTCTGGCAGGGGTGGGAGTGAGTGTGGCAGCGATGAAGGCTTTGAAAGTAGGGGCTTGAGGATGGCCAGGGAAGCTGCAAGGACTCAGGGGGTTATTTCTTTTGTTTTTGT TCONS_00029093 r 5' 0 TCONS_00029090 TCONS_00029091 TCONS_00029092 r 5' 371 EMBV3_27411 CCATGGACCTAAAGCCAGAGTCTCATAACCAAGGGGGTAAAGGTCCTCCCCAAGATAAGG Gene GeneID:511571|RNF25:NM_001015575:74_cdna Constitutive 0 NULL GeneID:511571 2 GENE RNF25 NULL ring finger protein 25 EMBV3_15435 CCGAAGTCGGACCAAAGGAGCTCCAGCCGCAGCTACTTCCTTAATCCGCTGTTCGGCGAA Gene GeneID:767976|AMN:NM_001077041:330_cdna Constitutive 0 NULL GeneID:767976 21 GENE AMN MGC127013 amnionless homolog (mouse) EMBV3_33920 CATGTCTTGGGCTGGAGGTGCCCGTACTTCCTTTGGCCACACTGCTTTCACCTTACATTT Gene GeneID:785149|LOC785149:XM_002689153:160_cdna Constitutive 0 NULL GeneID:785149 7 GENE LOC785149 NULL similar to olfactory receptor Olr1414 EMBV3_24225 AAGTGACAGGGAGCGTCAGGCAAGATACACACAGGTCCACGGCCCAGGGGCCAAGACTGA Gene BVT0102_157003 + 0 NULL GK000015.2:78356733-78383682 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04790 TGTTTGCATTTTAATAGACGGTATGAGCCAGGACACCTACAGGATGGCCCTTGGTGATCC Gene BVV0102_028433 - 0 NULL GK000005.2:101618951-101647628 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02462 GCAAATGGTATCATATCTGGCCAGCTGTAACCTCCTGCCTTGACCTTCATTCCTAGGGTT Gene GeneID:613274|LOC613274:XM_002698498:589_cdna UTR3_Alt 1 NULL GeneID:613274 26 GENE LOC613274 NULL hypothetical protein LOC613274 EMBV3_09904 AAAAAAATCAGTGTATCGGTGGCATTGCTAAGCTGAGTCAACAATGGAAACTGACCAGCA Gene GeneID:100137987|LOC100137987:XM_002685408:45_cdna Constitutive 0 NULL GeneID:100137987 2 GENE LOC100137987 NULL similar to Uncharacterized protein C11orf70 EMBV3_33094 CAGTGGAATGCAGAGGAGGGAGAGGTGTCCTGTAACTGGGACTCAGAGGAAATGGTGTTT Gene GeneID:526888|EPM2A:NM_001099709:17_cdna UTR3_Alt 2 NULL GeneID:526888 9 GENE EPM2A NULL epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) EMBV3_10266 CAGCTGTACCACCTGGAACCATTCCTCCAGTTTTTCCCCAGCCTACTGCTAATATCATGC Gene GeneID:540834|XRN1:XM_002685037:98_cdna Constitutive 0 NULL GeneID:540834 1 GENE XRN1 NULL 5'-3' exoribonuclease 1 EMBV3_38652 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41171 GCAGTCCCTGGAGTCTCAAATGGTTGGACCGGACTGAGCAACAAGCATACACAGCAATAA Gene BVT0102_185855 + 0 NULL GK000015.2:82512420-82560716 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25971 GCTCCTGCTGAAGCACCCAGAGGTCACAGCTAAAGTCCAGGAAGAAATTAACCATGTGGT Gene GeneID:522146|LOC522146:XM_002698400:316_cdna Constitutive 0 NULL GeneID:522146 26 GENE LOC522146 NULL similar to cytochrome P450, family 2, subfamily C, polypeptide 19 EMBV3_17587 AACTGGAGGTGAAGAGGGAGATGGAGCTTCTGGGTATGATGCCTATTGGAAGAACCTTGC Gene GeneID:533230|ZNF330:NM_001038157:35_cdna Constitutive 1 NULL GeneID:533230 17 GENE ZNF330 MGC134446 zinc finger protein 330 EMBV3_06178 ATGGATTCAGACCCAGACCCAGGCCCTCACAGGAATCGAGACGAAACAGGACGAGTTTGA Gene GeneID:100336687|LOC100336687:XM_002698125:430_cdna Constitutive 0 NULL GeneID:100336687 25 GENE LOC100336687 NULL hypothetical protein LOC100336687 EMBV3_29212 GAGCAGATGCGTTTCTGAGTACCACCATATCATACTCCCTGTGTTTCTGGGCTGCACACA Gene BVT0102_112225 - 1 EMBV3_41480 GK000001.2:105228020-105900096 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009852 1 XLOC_005405 NonCoding TCONS_00009852 XLOC_005405 NonCoding NonCoding - 1:105843802-105843950 - TSS6929 148 1 0 0 0 0.000125054019257962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000826043982570192 0 0 0 0 0 0 3.95888584238897e-05 0 0 0 0 noncoding 0 0 0 0 -0.0195446506471039 0.90945756553377 -0.0558158440108215 0.297242590596457 CTCCAAGAGCAGATGCGTTTCTGAGTACCACCATATCATACTCCCTGTGTTTCTGGGCTGCACACAAGGTAGTAATACTCAGTACAAGGAGAAGGAATACATGATTTTGATTTTGATTGACTTTTCCAATCAGGTCTCATGGCTGCCT TCONS_00004749 . 3' 855177 TCONS_00004749 . 3' 855324 EMBV3_23682 GCATGGAATACCTTTTTCTACCCTCTCACTTTCAGTATCCCTAGATCTGAAGTGGGTCTC Gene GeneID:783805|ACN9:NM_001080352:74_cdna Constitutive 1 NULL GeneID:783805 4 GENE ACN9 MGC143009 ACN9 homolog (S. cerevisiae) EMBV3_14104 CCTTCACAGAGTACCAAATCTGAATCAGCCCATTTTTTTCACGGCCCCTTGTTCTTCTCC Gene BVT0102_121519 - 1 EMBV3_35081 GK000005.2:80789970-81582316 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41553 ATGTGGGAACACCACCTAAGAGATGGCACTTCATTTTTATGGCGGAGACAGTTACCTCTC Gene GeneID:100336179|LOC100336179:XM_002686802:162_cdna Constitutive 0 NULL GeneID:100336179 4 GENE LOC100336179 NULL hypothetical protein LOC100336179 EMBV3_36273 TCTTCTCCTATGCCATTCTGGGCTTTGCCCTGTCTGAGGCTATGGGGCTCTTCTGTTTGA Gene GeneID:338053|ATP5G1:NM_176649:38_cdna Constitutive 2 NULL GeneID:338053 19 GENE ATP5G1 NULL ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) EMBV3_33944 CTCCATTCCAGTGCTTTTCTTCCAGGGGCGAAGGCTAGAGGAAAATACGGAGCTGCTGCT Gene BVV0102_018734 - 1 EMBV3_42941 GK000009.2:71913827-71927083 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01601 AAAGGACCTCGACACCACTCCAGCTGTTACTGGGATAGCTAATGTGCCACCTCCTTACCA Gene GeneID:616593|CYP2C87:NM_001076427:240_cdna Constitutive 0 NULL GeneID:616593 26 GENE CYP2C87 MGC127491 cytochrome P450, family 2, subfamily C, polypeptide 87 EMBV3_03772 TGGTGAGGGGCGGCTGGCTGTGGAGACAGAATGTGCAGCCCCCAGAAGGCCGGAGCCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23157 AGAAGCTGGAGGCCAGGGTACGTGAACTGGAAGGAGAAGTTGAGAGTGAACAGAAACGCA Gene GeneID:281337|MYH1:NM_174117:409_cdna Constitutive 0 NULL GeneID:281337 19 GENE MYH1 NULL myosin, heavy chain 1, skeletal muscle, adult EMBV3_06467 TAGGCCCCACCCCGTGCCTGACTATGAGCTAAGGAGGCCCATGTTGCTGCCCGTGTCTGG Variant GeneID:615639|OCEL1:XM_002688546:165_cdna 376^541 2 EMBV3_36588 GeneID:615639 7 GENE OCEL1 MGC151989 occludin/ELL domain containing 1 EMBV3_15550 GTATGTTCCGAACAAGCCTCCCAACACAGCAAGTGACTCGGTCCGAACAAGCCTGGGGGC Gene GeneID:100298766|LOC100298766:XM_002695148:705_cdna Constitutive 0 NULL GeneID:100298766 18 GENE LOC100298766 NULL hypothetical protein LOC100298766 EMBV3_07817 GCCTAGACCTGCTCCTGGCACACAATAAGCCCTCAGGAATCAAAGGAAGGGCTAAAACCT Gene BVV0101_051729 + 1 EMBV3_05975 GK000013.2:77673995-77822893 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43222 TGCCTGTGCGCACTCAACCTACTCTACACAGCTCAGCTCCTGGAAGTTGGTTGGAACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29357 CTCAGCCTCAGAGCTTTGGTATCAAGTAGCCGACTGGGTTCTACTCAATCCTGTATCTGC Gene GeneID:507126|LOC507126:XM_002685688:341_cdna Constitutive 0 NULL GeneID:507126 2 GENE LOC507126 NULL similar to basement membrane-induced gene EMBV3_30913 AATGTACCTGCATGTCTGGAGGAACCTGTGCCTGCGGAGACAACTGCAAATGCACAACTT Gene GeneID:782851|MT4:NM_001114859:483_cdna Constitutive 0 NULL GeneID:782851 18 GENE MT4 MGC155050 metallothionein 4 EMBV3_23460 GATTCAAAGAGCCACCTGCATTTGGACCAATGTGTGACTTGCTATGGTCCGATCCTTCTG Gene GeneID:790867|PPP3CB:NM_001099214:426_cdna Constitutive 0 NULL GeneID:790867 28 GENE PPP3CB MGC160129 protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform EMBV3_25617 CCACAAAGAAAATACAGCTGTGATCTCATGTATCAGTCTGCCTCCTAGGACATGCCTCAC Gene BVT0102_079646 - 1 EMBV3_31499 GK000024.2:43455154-43500035 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140336 TCONS_00140328 TCONS_00140337 TCONS_00140332 TCONS_00140333 TCONS_00140329 TCONS_00140334 TCONS_00140331 TCONS_00140335 TCONS_00140330 1 XLOC_085106 Coding TCONS_00140334 XLOC_085106 Coding Coding CEP76 24:43498684-43515274 j TSS104772 3828 2 TCONS_00140334_2 362 12 0.769968051118211 1.29213657994424e-30 0.000361668429344009 0.000145369718403689 3.03222775224268e-15 9.81200713940295e-30 9.42739075226203e-24 8.020847687717e-10 0.000239538833551831 0.00060813731980839 0.000135770365719826 6.26655535886414e-05 0.000141635142401469 7.30684179860864e-05 1.07421882936153e-10 8.29609881420143e-26 0.00135337015500527 0.000526149150134851 5.04644676402368e-05 6.13975386905171e-07 2.68633080640904e-08 9.47685978111437e-05 0.000354134875471566 0.000634832012948367 2.26461539452364e-18 3.54487096122046e-23 0.000941294287244281 2.52377519880208e-07 1.16070385970815e-28 2.68723174648368e-14 3.65338363756656e-05 XM_005224166.1 CEP76 PREDICTED: Bos taurus centrosomal protein 76kDa (CEP76), transcript 0.0 5380 98.38 0.792842215256008 NM_024899.3 CEP76 Homo sapiens centrosomal protein 76kDa (CEP76), transcript variant 0.0 3101 85.64 0.685736677115988 TCONS_00140334_2 sp|Q8TAP6|CEP76_HUMAN CEP76_HUMAN Centrosomal protein of 76 kDa; 0.0 715 96.12 0.994475138121547 1 coding 0 0 0 0 0.829780894033229 0.0821547500767182 -0.183910521275722 0.026013433722339 CGCGCGAGGCCAGCGGTCGCGGGCTCTGGCTCCGCCACGGAGACGCTGCGGCCGCCGGCGCGACCGAGGGGGAGCCCAGCATGTCGCTGCCGCCGGAAAAGGCGTCCGAGCTGAAGCAGCTTATCCACCAGCAGCTGAGCAAGATGGATGTCCATGGCAGGATAAGAGAAATCCTTGCTGAGACGATTCGGGAAGAATTGGCACCTGATCAACAACAGCTATCAACCGAAGATTTGATCAAAGCCCTTAAACGCCGGGGAATCATTGATGATGTGATGAAAGAACTTAATTTTGTTACTGATAATGTTGATCAAGAACTCCCTTCCTCTCCAAAACAACCTGTTTGTTTTACTGACAGACAATCAACGTTATTAAAAAAAACTAATATTGATCCAACACGGAGGTATCTTTACCTTCAGGTTTTGGGTGGAAAAGCTTTCTTGGAACATCTGCAAGAACCTGAGCCTTTACCTGGACAAGCTTGTTCAACCTTTACTTTATGTTTACATTTTCGAAACCAACGTTTTCGTTCTAAACCTGTTCCGTGTGCCTGTGAACCAGATTTTCATGACGGCTTTTTACTTGAAGTACACAGAGAAAATTTAGGTGATGGAACTAGAATGGCTGACTCTACCACAATGTTATCAATAAGTGACCCAGTTCATATGGTGCTAATCAAGACAGACATATTTGCTGAGACCACTTTAGTTGCATCCTATTTTCTTGAATGGCGATCAGTGTTGGGTTCAGAAAATGGAGTGACCAATCTTACTGTGGAACTTATGGGTGTAGGCACAGAATCAAAAGTTTCTGTGGGAATTTTAAATATAAAACTTGAGATGTACCCACCGCTCAATCAAACATTATCTCAAGAAGTAGTGAACACACAGCTTGCTTTGGAACGTCAGAAAACTGCAGAGAAAGAGCGATTATTTCTTGTGTATGCTAAGCAGTGGTGGAGAGAATACTTGCAAATTCGACCCTCACACAATTCACGACTGGTGAAGATTTTTGCACAGGATGAAAATGGGATTAACCGACCAGTCTGTTCTTATGTCAAACCACTTCGAGCTGGAAGGCTTTTGGACACTCCAAGGCAAGCAGCAAGATTTGTCAATGTCCTTGGTTATGAACGAGCCCCTGTTATCGGAGGAGGAGGGAGACTGTGAAGACCATGCCAACCTTCTGTGCAGCCTCCTGCTTGGGTACGGGCTGGAAGCTTTTGTCTGTGTCGGGACCAAGGCCAAGGGCGTGCCCCATGCATGGGTCATGACGTGTGGCACTGATGGGACCGTCACTTTTTGGGACAGTTTAACAGGACACAGGTACCTCCACAAACCTATCAACCCTGATGAGCCTCCGGCTGCCGAACAGCCCAAACCATTGTACCCGTATCGAACAATTGGTTGTGTTTTCAATCATCAGACGTTCCTGGGAAACTGTCAGCCCTCTGACTCAGTGGAAACCTGTGTGTTTGATCTGAATGATGAGTCCAAGTGGAAACCCATGAATGAAGAAGCGGTTAAATCCGTGTGTGCTCCAGGGGCCACCACGTCCCTTCCTCCCTTCCCTCCGCTGTGTGCGTCCACGATCGACGCTTCTGTGACAAGCAACGAGATAGAAATGCAGCTCAGGCTGCTCGTGTCGGAACACAGGAAGGACCTTGGCCTCACTACTGTCTGGGAAGACCAGCTTTCTTATCTCTTGTCACCAGCTCTGGCATCTTATGAATTTGAGCGTACGACAAGCATTTCTGCGGGCAATGAAGAGTTTCAGGATGCTATCAGAAGGGCTGTGCCTGATGGCCACACATTTAAAGGGTTCCCAATACACTTTGTGTATAGAAATGCGAGGCGCGCGTTTGCCACGTGTCTTCGGTCTCCTTTCTGTGAAGAAATCATCTGTTGCCGTGGAGACCAGGTGCGCCTGGCAGTTCGCGTCCGCGTGTTTACTTACCCTGAATCTGCTTGTGCTGTTTGGATCATGTTTGCTTGTAAATATCGCTCAGTACTATAGGACTAAGTTTCTATAAGACTATACCTGTGTTTTATTAGAGTTTTACACATTGTATTGATAATAATACTAGGTATTTCGAGGTTGATTACTTTAAAAATCACAATCTGGCTTCGATGTCATATTTAACTTTTGTATAAGCCTCACTAATAATGTTTGAAAAGTATCATGATGTGTGTATAAAAATTAAGGATGAAAAACTTGTATGAATCTGAGAGGATGTTAGTATAAATTAAGTGTTTATCTTATTTTAATAAATACTACTTTGCTTATAAGTAGTCAGTAGTTTAAATATGAAAATAAAATTTACTTAGTTTTCTTTGCATTAACAGGTAATCGGAAAGTTATTTGCCTAAGGATTTGAGCCATAGTGAAGTTAATACTATCATTATTTTTCATAGAGTAATGGGATTATTTTATATAAATTAGGAGAAATTAACTTCACAACATTTATTTATTACATAGGTGAAATACATTTTGATGAATTTACCACTTTTGTGGTTTACTCATAACTACAGGGATATTTGTGACTCTCTAGAGAGTTATGGGAAGACATGGATGCAGGAGCAGAGAATAAACTCATATCAGAAAAGCATAAATATTAATAACAAACCACACATGAAAGTATACAAATAATTTATAAATATTTGTTAGTGTGATTCATTGTAAAAGCAAATTGTGTATTTTATTTTTTTTGGCTTATTTATTTTTGAATTGAGTATTTTAGAAAAAATTTATTATACCCTTTTGTTGTATGTTGAAAATTGTTTTCTGTAATTGATATTGGCAGTCTGTTGCTGATTTTCTGTGGTCACAGCATTCTTTACTAGCCTCTCATGGAGTCTATCTTTTTAAATCACAGTTTTTGTTTGTTTCTTTTCTCTTTATGATAAAAGCATCCATGTGTATGTGGCGAATGTAAATCAGAGAATCATTATGTAAGGCCACTGAAAAATGAGCATCTGTGAGTGCCTCCATGCTGATGTTTGTTTTTAAGTTGAGAACAGTGTACTTTGAAGAGGCTGTAGTGATTTAAACTTTGTGAGAAGCTGCCTGATGGGATTGCCTTGCCATCTACCCACCTCTCTGTACAGCTCTCATTCATTCCTGCACCCACTGAGCTTCTTATGAAAGTGACTATACCAAGTGGCTGTGCAAGTTATGCTTTTCATCGCTAATTCAACATGGCAAATAAAATAATATTTTAGAAATTAAAATCTAAAGATACTCTAAAATTTACTTTTTAATTTTTACATACATAATTATTTATAACTTGTTTTAAAAGTCTGAAAATATCTCTCATATCAATTTTTATTGAAAATGACCAGAAATCAGAAGTTTCTTGAGACTGACATGACTTTAGAGAATCAGCAAGATAAGAATTAAGACTTTTTGGTCTGTTACCAGAGTTATTTGCAAAGCTATCAACAGGGAAAATTGCTTGTAATTTTCAACCTTTGGAACAAACTATTTGTGAGGCATGTCCTAGGAGGCAGACTGATACATGAGATCACAGCTGTGTTTTCTTTGTGGCTGAGCTTCCTGCATTACTGTGCCAGAGTAACACGTGTACTTGTAATGTGCTTTTGGTGTAAATTCTAAAATAAATTTCCTTTTTATGCACTTTAATAGAGCCTGGCATGAATTAGTATTTTCCTTTACAGATGGTATATTTCCAAATATTTTAGTCTTTTTGTCACTAGAATTCTACTACTCTTACTAATAATTTTTCTTTTTAAAAATTAAATTTACATTGTATATTTAGCTCTGTCATAAGTTGTTTTTCTATTAAAATTGTAAACTTTTAAAAAATAT EMBV3_05816 CCCTCCACCAAATCGTGACACCATGAAGGTTCTCTTTGGACACCTAACTAAGATAGTGGC Gene GeneID:616246|ARHGAP15:NM_001105003:154_cdna Constitutive 0 NULL GeneID:616246 2 GENE ARHGAP15 MGC140450 Rho GTPase activating protein 15 EMBV3_30578 GCCAAGAACGCTGACAGAGTTTCTGCTGATGACAGAGAATTTCTTGTTGCAGTTTCTCTC Gene GeneID:506787|PDE8A:XM_002696585:22_cdna Constitutive 3 NULL GeneID:506787 21 GENE PDE8A NULL phosphodiesterase 8A EMBV3_03070 TTCAAGGATCTCTACCGGTTTACATTTCAGTTTGGCCTGGACTCTGAAGAAGGGCAGCGG Gene GeneID:504926|DCUN1D3:NM_001015518:317_cdna Constitutive 0 NULL GeneID:504926 25 GENE DCUN1D3 NULL DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) EMBV3_42192 GGTGCCCATAGGGAGCACGGATTTATCTCTGGGCTTTCTATCTTGTTCCATTGGTCTATA Gene BVT0102_348249 + 0 NULL GK000015.2:14928853-15450241 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28246 TTGGTTCCAAGGCCCACATTCTGCAGTCCTCTGCTGATGGAGAGTTATTTCATATGTAGC Gene GeneID:510809|MIS18A:NM_001098010:28_cdna Constitutive 2 NULL GeneID:510809 1 GENE MIS18A NULL Protein Mis18-alpha EMBV3_23657 TTCCCCAAGCTAGAAACCCCTTCACTGGGTCTGAGAGTGGGATGATACCAGGACAGCCCA Gene GeneID:525426|LRRC29:XM_002694816:682_cdna Constitutive 0 NULL GeneID:525426 18 GENE LRRC29 NULL leucine rich repeat containing 29 EMBV3_39837 CTGGGGACAATAGGTTTCTGGGTTGGAAAACTTGGGCTGAGTTGAATGTCCCAGGAGCTT Gene BVT0102_170517 + 0 NULL GK000030.2:78398024-78628273 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28376 TAGCATGAGATGTGGCAAAAGGATTGTCAGAGATGGAACCTATGCCTGGAAGTGGTCCGG Gene GeneID:618014|LOC618014:XM_002700172:38_cdna Constitutive 0 NULL GeneID:618014 X GENE LOC618014 NULL similar to germ cell-less EMBV3_06593 CTGCAGGGATACAACCCCTTCGACCACGGCTGTGCCAGCAACTGGTATTTAACAATTTGT Gene GeneID:514466|ZDHHC19:XM_002684800:165_cdna Constitutive 0 NULL GeneID:514466 1 GENE ZDHHC19 MGC137377 zinc finger, DHHC-type containing 19 EMBV3_13524 CACAGAGGATGAATTCCCCCGACCGGACCTGCCTGGGAGGGCCTTGGGTCAGTGCTCAGG Variant GeneID:100140180|LOC100140180:XM_002696830:635_cdna 177^530 1 EMBV3_24976 GeneID:100140180 21 GENE LOC100140180 NULL hypothetical protein LOC100140180 EMBV3_22484 AGACAAGATGCCCCATGCCCTTTGGAAACCTTGACATCTCTGTGGTCTAAGTTATAATCC Gene GeneID:281701|CNGA3:NM_174279:8_cdna Constitutive 0 NULL GeneID:281701 11 GENE CNGA3 NULL cyclic nucleotide gated channel alpha 3 EMBV3_30847 AGACTACATTTGTGAGTTCTGCGCCCGGTCTTTCCGCACCAGCAGCAACTTGGTCATCCA Gene GeneID:507847|ZNF692:NM_001024496:2_cdna Constitutive 0 NULL GeneID:507847 7 GENE ZNF692 FLJ20531 zinc finger protein 692 EMBV3_42647 TCTTCAAGTTCCTCAGAACAACAGATGTTAAAGTTTAACTCTCCTGATAATGCAGAAAGC Gene BVT0101_036584 + 0 NULL GK000001.2:46452392-46464543 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000557 TCONS_00000566 TCONS_00000567 1 XLOC_000148 Coding TCONS_00000566 XLOC_000148 Coding Coding CEP97 1:46431438-46455037 j TSS288 4072 2 TCONS_00000566_7 467 0.0618860510805501 12 0.827951521315366 8.73849131782637e-34 3.16670431848723e-93 3.46802823896457e-05 3.20655600847826e-05 2.27877799552848e-21 1.94720515656938e-14 4.08873351650673e-06 1.43157280932627e-10 8.38335477063361e-05 2.51413660785575e-27 1.48328974851217e-06 3.38943799666195e-05 3.64901775857941e-34 4.78161317810365e-07 2.80759478702287e-05 8.06553423747562e-05 0.000660027344191847 8.52438268755226e-14 0.000229360319402289 0.000534948565356124 1.34191586258806e-33 2.40763930078229e-30 0.000157274307306459 7.71162502685912e-05 9.01580973807332e-33 0.000186134555221421 8.00199028548195e-09 2.29924191589811e-13 2.84168555023145e-24 1.80346442298059e-05 XM_005201236.1 CEP97 PREDICTED: Bos taurus centrosomal protein 97kDa (CEP97), transcript 0.0 4675 99.39 0.640962671905697 NM_024548.2 CEP97 Homo sapiens centrosomal protein 97kDa (CEP97), mRNA. 0.0 3036 86.45 0.612721021611002 TCONS_00000566_7 sp|Q8IW35|CEP97_HUMAN CEP97_HUMAN Centrosomal protein of 97 kDa; 0.0 697 77.58 0.9593147751606 4 coding 0 0 0 0 CCGAAGACCTTAGCGCTACCCGGCGCCGCGGATCCCGCGCTCTTAAGGATACCTGGTCTGCGGGTTTCTGGCTCCGGTGACCGTTCTTGGATGTCTACGTTGAGTTCTGGGTACCCAGGATCAGTGGTCAATTGGTCAGGGCAAGGGCTACAGAAATTAAGCCCAAACTTACCCTGTGAAGCTGATATTCATACTTTGATTCTGGATAAAAATCAGATTATTAAATTGGAAAATCTTGAGAAATGCAAACGATTAGTACAGTTGTCAGTGGCTAATAATAGGCTGGTGCGGATGATGGGTGTAGCCAAACTGACCCAACTCAGGGTGTTAAATTTGCCTCATAATAGCATTGGCTATGTGGAAGGCCTAAAGGAACTAGTTCATTTGGAATGGCTGAATTTGGCAGGAAATAATCTCAAGGCCATGGAACAAATCAACACCTGCACCTCTCTACAACATCTCGATTTATCAGACAATAACATACCCCAGATAGGTGATCTATCTAAATTGGTATCACTGAAGACCCTGCTGTTACATGGAAATATCATCACCTCTCTTAGAATGGCACCTGCTTATCTACCCAGATGTCTTGCTATACTTTCTTTGGCGGAAAATGAAATCCGGGACTTAAATGAGGTCTCTTTTCTGGCATCCTTAACTGAACTGGAACAGTTGTCAATCATGAACAATCCATGTGTGATGGCAACACCTTCCATCCCAGGGTTCGACTATCGGCCATACATCGTCAGCTGGTGCCTAAGCCTCCGAGTCCTAGATGGATACATGATTTCTCAGAAGGAAAGTTTAAAAGCTGAATGGCTGTATAGTCAAGGCAAGGGGAGAGCGTATCGGCCTGGCCAGCACATCCAGCTTGTCCAGTATCTGGCTACAGTCTGTCCTCTCACTTCTACGCTGGGCCTTCAAACTGCAGAGGATGCCAAGCTAGAGAAGATTCTGAGCAAGCAGAGATTTCACCAGAGGCAGTTAATGAACCAGAGCCACAATGAAGAGTCGTCTCCTGTTGAATCAAGGGCATCCCTTGTGCCAGAGCATTCCAGCCCCATTCAAGATGGCCAGAACCCGTCATCCAAGTCAATTCTTGGGTTGGGATAAGCAGTCATGATGACCAATCACATGCTGTTAAGAATAACTTTCCAACCCCTGTACACACTGCAAGATATTCTCGAAATGACCTGCATCTGGAAGACATCCAGACCGATGAGGACAAGTTAAATTGCAGTCTCCTCTCTTCAGAGTCTACTTTTATGCCAGTTGCGTCAGGACTGTCTCCAGTATCACCTACAGTGGAGCTGAGGCTGCAAGGCATTAACTTAAGCCTAGAAGATGATGCTGCTGCAGATGAATCTGTGAAAGGGCCTGAAAACCAGGACTTATCAAACAAGGAAGAGGAAAAGGCTTTGGGGGCTGCAAATGAGAATTCTGTTCAGATGACAAAAAGTGCAGTTGGTACAGAGATAAATGAGAAAGATGGACTGTTACCTTGTCCTGAGCCAACAGTCACCAGTGCTGGCTTGAAGGATCACACCCACAGTCTTACGTCTTTTCCTGAGTCGGTTGGACGCAATGTCTTCCATACGCAGCCAGACAGTGAAGAAGCCAGGTCTCAAACAGCTTCAGAGAAAGTTCCCTGCAGGCTGTTAACCCAGAAATCTGTTCCTTTGGGACAAGATAAAGTTGCCCTCCAGAAACTGAATGAAGCAGCCACCAAGCTTCAGGCCTGTTGGCGGGGCTTTTATGCCAGGAACTACAACCCACAAGCTAGAGATGTGCGCTATGAAATCCGTCTTCGCAGGATGCAAGAACACATTGTCTGCCTAACTGGGGAAATAAGGAGATTAAAAAAAGAAAGAGATGAAGAGCGGATTCAAAAATTTGTTCAAGAAGAGGCTGTCAGATTCCTTTGGAACCAGGTAAGGTCTCTACAAGCTTGGCAACAGACTGTGGACCAGCATCTAAGTTCCTGCCATATTGATGTTCCCCCTATATCAAGTACTCTGGTGCCATCTAAACCTCCATTATTCACCCAAAGTCAGCAGCCATCTTCTGATCAAAATTCTGATTGGTTCATTGCTCCTGATGAAGCTCCTCAAGAGAAATCCTTACCAGAATTTCCAGACTCTGGTTTTCATTCCTCCTTAACCGAACAAGTTCACAGTTTACAGGATTCTTTGGATTTTGAAAAAAGTTCCACAGAAGGTAGTGAAAGTTCCACAATGGGGAATTCCATTGACACTGTCAAGTATGGCAAAGAGTCAGACGTAGGGGATGTTAGTGAAGAACATGGTGAATGGGGTAAGGAAGGCTCAAACAATGAGCAGGATAATAGTCTGCTTGAACAGTATCTAACTTCAGTTCAGCAGCTAGATGATGCTGATGAGAGGAGACACTTTGATGAAGGGATGGGAGATAGTAAGCTTCACCTACCTCGTTCCCCTGAAAGGTTAGACGTCTTATCTGATAGCGCTTCTATAGATGTTGCTCAAGGTGTATCTCCTGCTTTGCAATATGAAGTCAGCCAGACACCAGAGAATTGTGAATTAAATGCAGAAGTACAAGGGCAGCAGTCAGAACGTGATTCTACATTTCAGTTAAGTGCCTCATTTGCTGCCCGTAGTTCGACAAAGGAAAACCAACTTGCACTGCACTAGTACCAAAGTGCTGCTTCATGGTGCATTAATTACTTGTTAATTTCTCATAAAAGCTCCTGAAATGTTGTGGTTCAGTATTACCTAGTAGGTTTCTTCCGATGTCTGCTCCCTGTTCTTTTTTTTTGAGAAAGGGCAAAACACAACTGAATTCATTTGAGTATTAGCATTTACAAGCAACATTTCCTTTTTTTACCTTTGCCTTGATTTTCTATCCCATAAATGGTATTCAGCATACTTTTAATTTGAAATTGGCAGAATATGATAATGACTAATATCCTACTCTTCATTCTATTTAACTTTACTAGTGTTTTGAAGTGCAAGAATGTTAAGTAGCCCCCAACCTTGACTGTACAGATTATCTTGAATGTAAATAGGATGAAAATAATGTATATTAGAATGCAGGAAAACTGTGGCATAGATAATATATTTTAATAGGTTTACAGTGTAATTTAAAATTATTTAACCAAGATATTTGGTTTTAACTCTGTGGGCTCTTCATTGGTCTGGCTGACGAGGGAATGGGCCTCGTATGGTTTGGGAAGTTGAGCTTTACCACAGTATTTGTGTTTTTCTAATAGATGTTTAGTTCAGCTGTGGTATTTTAATTCAACTCTCTTGATTTATGGCCAATTCAGCATATCAATTAGATATTTCTTCAGAAGCACAGAATCATACCATGTGAGAATTTTAAGGACCTTAGAGATTGTCTATTCTAATCTCTTTGTTTTAAAGATAAAACTAAAGCACAGAGAACTTAGATGACTTTTCTGAGGTTATAGCTAGTTTATTGGAGAAGGCAATGACACCCCAGTACTCTTGCCTGGAAACTCCCATGGACAGAGAAGCCTGGTAGGCTGCCGTCTGTGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCTAGTTTATAGGAAAAGAAACTGTGGAAACTTAAAAGTTACTTTATTCCAGAATTTTATTATACACATTCTATTATTCTTTACTTTTAGTAAGTCAGTAGAAAGTCTGTACTTATTTTTCATTGTCTTTGAAAGCGGAAAACTACTTCTAAAAGAGCTAGAGCTCTGCCACTCAAGGCAGAGTTGCTTGTAGAAAACAACTGATTTGTTCAGAACCCTGAGTGAATTTTCTCCAAGAAATGTGATTTGATTAAAATGAGTTTTAAAGAGTAATACAGTAGAAACTAACATTTAGAAAGAATAATTACATCTTGGAGTCTATTTCATTGATGACAAGAAGTATAACAGATTGCTGAGATATATAAAATTTTCTAGTGAAAAGCTAGTTTGATTATATTTCATCTTCAAGTTCCTCAGAACAACAGATGTTAAAGTTTAACTCTCCTGATAATGCAGAAAGCTTCAATCATGACAGTTGATACATAAATACTG EMBV3_37137 CTCCAACCCATGCTGGAAAAGAAGACACCTTACCTGAAATCTCACTGCTGGAAGTGCTGC Gene GeneID:615337|C15H11orf63:NM_001038208:228_cdna Constitutive 0 NULL GeneID:615337 15 GENE C15H11orf63 C11orf63 MGC134450 chromosome 11 open reading frame 63 ortholog EMBV3_15746 TCAAGCACAAGGTGGAGCCCGTGTACTTCAAGATCCTCTCTGGAGTCATCCTGGAGGTGA Gene GeneID:510299|CYGB:XM_002696164:118_cdna Constitutive 0 NULL GeneID:510299 19 GENE CYGB NULL cytoglobin EMBV3_09560 CTTGTATATTATTGGCTTTCTTCTGTTCAAGAACCGGACCTGCCGTGGGCTCCACAAGGC Gene GeneID:618034|LOC618034:XM_002697413:112_cdna Constitutive 0 NULL GeneID:618034 23 GENE LOC618034 NULL similar to olfactory receptor, family 12, subfamily D, member 3 EMBV3_34109 AGGTGATTCGAAATCCTCTGTGTGGGATTTGTCTGAAGGGTAAGGTGTCGAGCACGAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17118 GCCCAGGTGTATCTCATTATAAAAACCGTGCTTGGTCTCCAGGGCGCTGCCTCTAAGTCA Gene BVT0102_264165 + 0 NULL GK000009.2:38871641-39107806 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33918 TCCACTCTACTCCTGGCACTTCCAAAACCCAGAAGCCTCACAAGCCCTTTCACCACTCAT Gene GeneID:511821|ZCCHC7:NM_001046100:7_cdna Constitutive 0 NULL GeneID:511821 8 GENE ZCCHC7 MGC137207 zinc finger, CCHC domain containing 7 EMBV3_27822 TGTTTGTGAAGGAGAAACACTATCTCACGGCCTTCTACGTGGTCGAGTGCATTGCCATGA Gene GeneID:281800|PROKR1:NM_174330:11_cdna Constitutive 0 NULL GeneID:281800 11 GENE PROKR1 GPR73 prokineticin receptor 1 EMBV3_12411 CAGGCCATCGATGATGATTGTAACCAAACAGGGCGTGGACCTGACCTCCAAGCTCTCCGT Variant GeneID:617210|ETFB:NM_001038582:41_cdna 431^669 3 EMBV3_08159 GeneID:617210 18 GENE ETFB MGC134248 electron-transfer-flavoprotein, beta polypeptide EMBV3_41423 AATATCTGCAGTTCCGATTTCCAGAAAAGACTAAAATGTGACACAGTGGTGAGTGAAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20952 AGCTGTGCTTTGCAGACTTCCTAGGAAATGGAGTGGAATGCATGGACCTTCAGAGCCTCC Gene BVT0102_032470 + 1 EMBV3_17349 GK000015.2:67741049-67768373 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03611 TCTATAAGGAAATGTTGGCGGTAGATGCCCCGAGGAGACACAAGGTATCCGTCCATGTTC Gene GeneID:523752|IDE:NM_001075849:30_cdna Constitutive 0 NULL GeneID:523752 26 GENE IDE NULL insulin-degrading enzyme EMBV3_00251 CTGCAAAGGCTGGGTCTAGGAAACAACAGGATCACAGATATTGAAAACGGAAGTCTTGCT Gene GeneID:507990|ASPN:NM_001034309:84_cdna UTR3_Alt 2 NULL GeneID:507990 8 GENE ASPN MGC128677 asporin EMBV3_21187 TTCCTGCTGGTCATTGGTGTCGGCTTGTGGGTCGGGGCCTCTCTCTTTGCCAGCAACATC Variant GeneID:399680|SLC5A2:NM_203360:236_cdna 141^212 1 EMBV3_11700 GeneID:399680 25 GENE SLC5A2 NULL solute carrier family 5 (sodium/glucose cotransporter), member 2 EMBV3_05227 CAACCCCATGCAATCTATCTAGGTCACCACATAGCATGAAGTCGAGCTCCATTCGCTGTA Gene BVV0102_208874 + 0 NULL GK000018.2:43572216-43574288 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086260 TCONS_00083300 TCONS_00083302 TCONS_00086261 2 XLOC_052097 XLOC_051223 Coding TCONS_00083302 XLOC_051223 Coding Coding C18H19orf40 18:43568645-43573998 j TSS62629 3137 1 TCONS_00083302_2 215 0.320688555945171 4 0.414611360239163 0.0036959358907604 0.00268874432805603 0.00229014281106903 0.0014197967618385 0.00327510413999309 0.000476060444470119 0.000862496220542251 0.000786055750479174 0.00355788850203198 0.000220395297597498 7.5903002393839e-06 0.000263062678658885 0.000184234905893401 0.000125160301350738 0.000129377807527157 0.000726945260008373 8.38909328827861e-20 8.26414098687398e-05 0.00545407131293743 0.00324219589870064 0.00253642269979843 0.000724719957965768 8.5552424018288e-06 3.04294604773652e-05 0.00344949798276462 0.00287429284377893 0.00233480321512364 0.000145454507912358 2.35006697209703e-05 0.000122277366092781 NM_001046062.2 C18H19orf40 Bos taurus chromosome 18 open reading frame, human C19orf40 (C18H19orf40), mRNA. 0.0 1808 99.70 0.321644883646796 NM_152266.3 C19orf40 Homo sapiens chromosome 19 open reading frame 40 (C19orf40), mRNA. 0.0 715 83.93 0.21102964615875 TCONS_00083302_2 sp|Q2KHY5|FAP24_BOVIN FAP24_BOVIN Fanconi anemia-associated protein of 24 kDa; 7e-157 438 100.00 0.995348837209302 1 coding 0 0 0 0 -0.341557359750999 0.387102148277759 -0.0239960029875096 0.789451242768669 AAGATGAGAGAGTAGCGAGGAGTTCAGGAGGCAACCCAGATGTGTCGCTCAGCAGGTAACGTTGCGGGAGACCCAAACCTGGTGCCGTGGTGGCTAGCTCGCTACCCCCCCGGACTGGACTAAGGTGCCATGGCGCGGACCGAGCCAGGGTTTCAGGGGCAAGACAGGTGACGGAAATAAAGGGCGCTTCTTCCAGGACAGGAATCTCCTGGTTCTTAAACTTTCGCCTGTAATCCAGCCTTTTAAAGAACACCCTGCAGTCGGGCTCCTGCCAAAGGGGCCCGGGCTTCGAGTGAAACGGGCTGTGTGCTGAAGAATCTGCTTAAGTGCCGTCTTGCATTCCCCTCATTAGATCGAGGCCGCCGATGGAAAGCAACCCCCCTGATAGCACTGGCCCCATGCATGTACCATTTGGGCACATTGTGGCCAATGAGAAATGGCGCGGTTCGCAGCTGGCACAGGGAATGCAAGGGAAAATTAAACTCGTTTTTGAGGATGGCCTGACACCGGTAGATTTTTACTTATCTAGCAAATCCTGCATTCTTTACATCACCGAAGCTGAGTTGGTGGCAGGAAATGGCTACAGAAAGAGACTTGTTCGGGTTAGAAATTCCAATAAACTTCAAGGGATTGTGGTAGTTGAAAAAACGCAGATGAGTGAACAGTATTTTCCAGCTGTACAGAAGTTCACTGTTCTGGATCTTGGGATGGTGTTGCTTCCAGTAGCCAGCCAGATGGAAGCATCCTGCCTCATTATTCAGTTGGTTCAAGAGCAAACCAGAGAGCCCAGTAAAAACCCTTTTCTCAGGAAGAAACGGGCTCTGGTCTCTGAGCCGGCGCTCCTCCGAAGTGTGCAGCAGATCCCAGGAGTCGGGAAAGTGAAAGCCCCCCTCCTGCTTCAGAGGTTTCCAAGTATCCAGCAACTAAGCAACGCGTCTCTCCGAGAACTGGAGGCGGTAGTAGGACCAGCAGCAGCCCAGCGCATTCATGCATTCTTCAGCCAGCCCAGGTGAGGGCTCCCCTCATGGGCGTCTCATCTCTGGACTGCAGGATCTTGTTTTCTTTTCACACGAAGAAAAGAGTTCCTTGGAGAAGGAAATGGCAACCCACTCCAGTACCCTTGCTTGGGAAATCCCATGGGGAGTCTAGTGTGCAACGGTCCATGGAGTACAACAGGGCCGGACACGGCTTAGCGACTAACAGCAGCAAATGGCAGTTCCAGCCAATGTGTGAGAACAAAGACTTGTAAGGAGTCGGGGGTTGGGGCTGAAACCAACATCCTATTGTTTACAGATGTGAATGTCTATTTAGGAAAACCAAAATAAACTGCAAGCAAATATTTAAACTAAAAAAAGCGGAGTTCCTTTTACAATTAGGGAAAGGTGAGAAGAGGCCTGAATGGAGCCTGCCAGTGGTCATGGCCTGTTCTCTGGCCTTAGGCATGTACTTCGATTAGTGGGCCTGCGCCAGATGGCACTGCCCTCATCCTGCTAGCATGAAGTGGGCTGGTGGGCACTTTGCTAAGGGAACCTCAGATTCAGCAGAAAGGCAGCCTCGGAGGATTTTAATGTGTGACCTTGACCTTATCTATTATGGAAGGTGGAGGATATGACTGTTTAAAGGAAACAAACCTACAATGAAGCACTGTTACCATAAGCTCCTTGTTCCTGCTGGCAGAGCCACCGTTCTTCAGGTCTGGTCTTAGTGTACCTGTGCTGTGAGGGTAGCTGCCAGTGTCAACAAACAATTGTACTGCCTTTTTTTCCCTTTCTGTCTCCCTTCCTGGTAGTTGCACAGTTTGTTTATAATCACTGAGCACGTCTTCTGAACACAGAAGGCCTGGAGTCTGGAGTTCCCACCGTAAGATAAAAAGCCAGCGTGTGTGAGGGACGGAAGAATGTGTTTGTAAATGGATAGCCCAGCGACCAAAAGATGCACAGGGAAGTGGCAGGGCCAGCTGAGGAGAGCCTGGGGCTAGAGACCAAAATGTACAGTTGCTCATCTGAAAAATAAGTACACTGAACAACAACTACACACACACACACCACACACACACACACACACACACACACACACACACACATGTTGGAATTTACTCGGCCATCACAAAGAATGATGTTGGGTCATTTGTAAAGATGTGGATGGACCTAGAGTCTTTCACGCAGAGTGAAGGAAGTCAAAAGAGAAAAACAAATATCATATATTAACACATGTATGGAATTCAAAATGTTACAGGGCAGGAATAGAGATACAAATGTAGACAATTGACAGGTAGACACAGAGAGGTGGGGATGGGATAAATTGGGAGATTGTGATTGACATATATGCATGTCATGTGTAAAGTAGATAGCTAGTGGGAATTGACTACAGTGAATGGAGCTCGACTTCATGCTATGTGGTGACCTAGATAGATTGCATGGGGTTGAGGGGAGGAGATCCAAGAGAGAGGGGATCTATGTATACATATAGCTGATTTGCTTCATTGTACACAAGAAACCAACATAACATTGTAAAGCAATTACACTCCAATTTTTAAAAAAAGACCAAAAAAAATACAATTAAAGAGGCCATACCTTTTCGAGGACACTAAGACATCTTGAAAGCTCTCAAAGTCCTATTTTGTGAAATGTTAGTAATTTTTTAAAAAATGTATATATTTATATATTTACTTGGTTGCCCCGCGTCTTAGTTGTGGCACACTAGATCTTTACCTGTGGCATGTGAACTCTTAAGTTGCCGCATGTGGAGTCTAGTTCCCTGACCAGGGGATGAACCTGGGCCCAGTGTATTGGGAGAGCAGAGTCTCAGCCACTGGACCACCAGGGAAGTCCCAGTAACTTTTTTTATTACTTTTTTTTGTTTGTTTACATACACACTGCTTATTTATTTATTATTTTTGGCTGCACTGGGACTTTGTTGTCGCACACAGGCTTTCTCTAGTTGCAGAGAGCGGGGGCTACTCTCTAGTTTTGGTGCTCAGGCTTCTCGTGGTGGTGGCTTCTCTTGTGGCGCACAGGCTCTGGGCGCACAGGCTTCAGTAGTTAGAGCACACGGGCTCAGCAGTTGTGATTTGATAGGCCCTAGGGCACTCAGGCTTCCAGAGTTGTGACACAGGGCTCATTAGTTGTGGCTCGAGG EMBV3_37375 ATGAAGCAGAGCCTCAGCAGGCATGCCGTTGTGCATGACCCCAACATGAAGAAAACCAAA Gene GeneID:100135054|GTF3A:NM_001113572:2_cdna Constitutive 1 NULL GeneID:100135054 12 GENE GTF3A NULL general transcription factor IIIA EMBV3_28202 GGATAGCAATGCTCATTTCTTCAGTTGATATGATGTGGTACTTTAGTCCTTTGTGCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26657 GCTGGACCTCATCGGGATAAGAAACTCAAGTACTACATCCCAGAAGTTGCTGACACTGGC Gene GeneID:786239|LOC786239:XM_002685779:610_cdna Constitutive 0 NULL GeneID:786239 2 GENE LOC786239 NULL similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 EMBV3_26192 CCCCTTGTTCTTAAGCTCCCCAGCAGAGGGTCTTGTAGGAGAGAAACTCTGAGAGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19252 GCAGCGGGCGTTAGCCCTTGCGGCCAATTCCATGCCTGAAGTTTTATCTTTATTTTGAAA Gene BVT0102_425237 + 0 NULL GK000016.2:62244561-62252791 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067850 TCONS_00067849 1 XLOC_041553 Coding TCONS_00067849 XLOC_041553 Coding Coding TDRD5 16:62247601-62333195 j TSS50928 5550 1 TCONS_00067849_8 1161 0.122702702702703 18 0.935368546493288 0.000192181165663071 5.18279858446003e-05 0.000142659212169053 0.000164717907509967 6.95064126854603e-07 3.98552838877278e-05 1.00030651708676e-08 0.000197047821446703 3.53256989557201e-05 1.5473446516909e-43 1.13008626069714e-09 2.9662013472914e-93 6.75444082495411e-07 1.21243721771845e-54 2.81128399846804e-23 6.63794553196035e-26 9.03381174730244e-86 1.19631034547183e-21 0.00104033703345728 0.000401950772910373 0.000297306494250098 7.71470768908784e-24 3.87595644582304e-06 1.38157081083591e-60 0.000100022754059368 0.000259703399437525 0.000390433029276808 1.62237343323089e-17 3.99009437377858e-30 1.65621481958178e-06 XM_005217248.1 TDRD5 PREDICTED: Bos taurus tudor domain containing 5 (TDRD5), transcript 0.0 6675 100.00 0.666666666666667 NM_001199089.1 TDRD5 Homo sapiens tudor domain containing 5 (TDRD5), transcript variant 0.0 3901 84.50 0.626126126126126 TCONS_00067849_8 sp|E1BPH3|TDRD5_BOVIN TDRD5_BOVIN Tudor domain-containing protein 5; 0.0 1829 89.06 0.89405684754522 2 coding 0 0 0 0 -0.17988811921878 0.209363167087279 -0.00143966502650594 0.983509742097361 CTTTCCTATGCAAGATCTTTAGCAGCATCTCTGGCCTCTACCCACCACAAGATGCCAGTAGTACCAATCCTGAGACATTGTCAAGTGTCCCAAAGGGACAAAATTGCTCCTGGTGGGAACCACAGATATCTATATGTTACCATGGGGACCCAAAGGAGAGGACAAGTAATCCTGAGTAAAGTCAGAGAAAACCTAGATTAAGCCATATTAAGAGGCGGGCAGGTGATTCTCAGAGGGCTTCAAGAACTGGGCCTTCCAGCAGATCAAACGACTACATGAAATTCCTAATCAAGGGTTTTTGATAAGCTTTAAATATTTTTTGTTACCATGGATGAGAAATGTGTTCACTCAATTTTTAAAAAAGATTTATTTTATTTATGGCTGTGCTGGATCTTGGTGGCTGCCCACAGGCTTTCTCTAGTTGCAGCGATCCCTGGCTACTTTCCAGTTGCAGTGGGCAGGCTCATTGTAATGGTTTCTCTTCTTTCGGAGTATGGTACAAATGGATTTCAAATTCAACCAAACTTTTTCCAAACCAGTATTTCAAAATAAAGATAAAACTTCAGGCATGGAATTGGCCGCAAGGGCTAACGCCCGCTGCGCAGGAACCCCCACCTCGCTCCCGGCCCTTCGTGGGCCTAGTTTTAAGCTGCGCAGCCTCCTTGCGAACCGGAAGCGCTTCGTCTGGCGCTCCTGAACTCAGAAAACTGGCGGCACCCAGCTTCTTGCAGCAGTTCAGTGCAATGTCTGAACAAGAGCGTATACAGGAATGCCTGAGGAAGGAAATAAGGTCACTTCTCATTTCCACCAAAGATGGTTTGACCCCACAGCAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCATTTACCGCTCCGAATCCTTGGGTATCGGTCCACAATGGAGCTGGTGTTGGATATGCCTGATGTTGTCAGTGTCTGCCCCTGTGGGGATGGTACTGTAATACTGAAAGCCATCCCAGATGAGTCCACCAAAGGAATAGCAAATTTAGTTGCAAAACAGAAGAGCAACCATAAGGTTCGAAACTCTATGCAGAAGGGAAGGGCCAGTGTTTGCTCTGGTCCCAGCTCTCGCCGGCGAGTACCTTACCGAGGAAGGGTGCCCCCTATTCTTCCAGCTGTTGTGAAGAGTGAGTTGAAAGATCTCTTGGCGTTATCTCCTGTTCTCCTTTCTGATTTTGAAAATGCATTTGCCAATCGATTTGGACGATCATTCCAGTATGTGCAGTATGGCTTCCTCTCTATGTTCGAAGTGCTGAATGCTGCTTCAGATGTTATTTCTGTGGAGCAGACCAGAGCAGGTTCTTTGTTGACGCTGAAGAAGAGTGTATCAGAGGAAAAGCAGAGAGGATGGCCTGCAGGTAAGATTTTCACCCAGCCTTTTAGAATGAAGCAACAAGGGTCATATCCCATAGGCTTCCCAGTAGCAAAGGCATGCTTTTCACAACCCACTTCAAACATGGAACCACCAAAGCAAATACTGGGCATGGAAAGGAATTCTAGATCAAATGTAATGGAGACTTCAAGGCTGAATCACAGTGAAAAATTAAACCAGTTGGAGAATACCTTCAAATCAGTTATTGCACAAATTGGACCTGGAGGGACTATTAATCCAGAACTAAAACATAAGATAAAATTTGTTGTATCCAGGTTTCCAGAGGGTTTGCTTATTTCTAAATTGCTTAGAGAGTTTGAGTTAATTTTTAAAGAGCAACTTTCACCCAAAAAACTGGGCTTCTTAAATGTAATAGAGCTTGTTGGAGCTCTTAGTGACATTCTCCATGTTGAGTTCAGGGAAGGAGAACAAGACTTGCTGGTGTTTGATGCTGATATGAAGCCTCTAGCCTCTGATGGAGCTGTGTCATCAGTCAGAAATTCATTTTTAGTTCAACCAGATAAGAAAACAGAAGCCAAAGCTTGTGTGTCCAGTCCCCCTAGAAATTCACTGTCTACTGCTGTTATCAAGGAGACTACTTGGGATTGCCCTTCAAAAAACCATAAGGAACCAGAACAGAAGATTTTCAAGAAGCCTAATCTGGTGGTAAAACCTTTGCAGCTGCAAGTAGAAATTAACAAATCCCAGCTCAGCTTGGCAGTGGCAAATCATGACATCCCACCAGATGCTGTGCGGGACAAGAAATTATGCAGACTGCCCCCATTAGATACCAGTACCCTCGTGGGTGTCTTTGTGGAGTATATCCTCTCTCCTAGTCAATTCTACATCCGAATCTACAGCAGGGATTCATCAGAATTACTTGAGGACATGATGATTGAAATGCGGCGCTGTTATTCTAATCAGTTGGTTTCTGATCGATATGCCATGCCAGAATGTTTTATCCAGCCAGGACATCTCTGTTGTGTAAGGATTTCTGAGGATAAGTGGTGGTATCGGGTCATTATCCATCGAATTCTCGGGAAACAGGAAGTTGAAGTGTTCTATCCAGATTTTGGAAACATTGGAACTGTTCAGAAGTCTTCCCTGAGGTTCCTCAAGTGCTGCTACACAAAGCTTCCTGCTCAGGCTATCCCTTGTTCTTTGGCATGGGTGAGACCAGTAGAGGAACATTGGACATCCAGAGCTGTTTTGCAGTTCCAGAAGTTGTGTGGCTTGAAGCCATTAGTAGGGGTAGTGGATGAATATGTAGATGGGATCCTGAACATTTTCCTGTGTGACACGTCCTCAAATGAAGATGTCTATTTCCACCATGTTTTGAGGACAGAGGGTCATGCTATTGTATGCCGAGAAAATGTCCCTTCTAAGGGTTTCAGAGACCTCAACCCTTTAGCTTTATACACTAAATCCAGTGTGACGCCTGAGGACATTGTCCTGAAAGAGCTGGGCTATCATTCCCAGCAGCACTATTTTAATGAAGACCGAGAGATCAGTCCACAATCAAAAGAGAGTGACTTATATACCCTGCAAGATATTAATGATGAAAAGACTTTCAGTCACCTTGGATCAGTCACCTCAGATGAGCCATTAAAGGATTCTAAATTAAATTCTTTGAAAATACAAGATAAGAGCTATGAAGAAGATCCAAAGTGGTCCATCCCAGAGCTAAAGGATCTGAAAGAAGAAAATGAGGATGAGATCCCCACTGGAATGCCATACCTGGAGTCAGTAACCATAGGTGATGATATTTGGGATGAGAACTGGTTACCTTTGCAGGCTAAAATGGGAAAAGAAAGTGATGCTGCCTCCCACTTATTTACCTCAAGCCTTGGTGGAAAGAAACCATATCCATCATGTAAAGAAATACCACAGAAGGATTGGTGTTTTTCTACACCCAAAGATATATGGGATGATTCATGGCAGCCTTCAGGCCTTGTGAATGGAATGAAAGTAGAAGTTCAAATACCAGAAGGACTGGGTGCTCAGGAAAAACATATTGACACCACCAGGATTCAAAAGCAATCAAATGTCAAGAGTGCCTCAGATTCTCCTGCATTGCCCAAACTGGAGGAGTTCTACATCTCTCTTATCCAGTCACAGCAGTCAGCAGAAGGCAGCCAGTTTGAGCCTAGCAACATTCAGACTCCACCAAAGCAAATTCAGCTGTCCTCAACTCCCACATTGGTCAATTCTGGGTCAGTGGAAGGCTCCCCAGAGAGCCTAGAGAATGAAGATTTTTCTAGTAGCTCTGCTATTACAGTGTTCAAAGATACAAGTCAGGGAGCCGTGGACCAGCTCTCTTTGATTTTGTCTCCCGAGCACCAGATTTCTCAGAAGTTCTACATTCCTCGAAGCACAGCCACTGCTGCCTTAGGAGCTGCTGCAAGGCTCGCCACATCCAACAGCCTCCTGCACTGGTACCCCAGTGTGAAAAAGATGGAAACATGAGGGCGGTGGGGAGGAAAGTCAACCAGAGGCTTAGGGCGTGATGCCTTCCCAAGTCAAACCAAGAGGAAGTATTGAGACAAAAACAGTATTTTGTTGACTAAGTTTCAAGACCAAGTTGGTGCCTTTGTCTTTCTGTGCAACCCTTTGTTAGCTTTGTTATGCTCACACTCCCCTTTGTTGTGTAGGTATTGATTTCTAACATTCATTATCATTTTCATTGATGATGTTTATTTTTCTTAGAGTTTTGTTCTCCTTTGTTCAATGTAGAAGTTTAAAGGACTTTTTAGTTTCTGTGTTTCTATAAATGTTTTTCTTGTATATCTCAAGACTGATAAATGTAAGCTGAAAAACTAATGTTTTGTGATCCATACTTAGCAAAAAATTGTCACAGCTCTGTCTCCAGAAAGAGGATGACTGACTTCTAAGGCTGCTTTTCCTCATTTGAAAACTTCTATACCATAGAGAGAATCTACGGCTCCAATCTTCGCCGTCATTAATTCTTTGAAATACTAGGATCACTAAGAAAATCCACACCATGAATCTTTGGTCATGTGAAACCTTTTACATTAAAAAAAAAAAAAAAAAGATGAAGCTGTCTTTCAGTGTAGGCAGTTTCTTGAAGACTTAACAAGAAAATTAGAGACCAGTTGTTGAAACTGAGCTGAGCCATCTCAGTCATCATAGTTCTCTGGCGCCTTAATGTAACAGTAGCTAAACAGTGGTATTGTTTAAGCATTTATAGGGCATGCATTTATAGAGCACTTGTGAAACACTCAGTCATGTCTAACTCTTTGTGACCCCATGGACTGTATAGCCTGCCAGGCTCCTCTGGAGTGGAGAGCCATTCGTCCAGGGATCTTCCCAACCCAGGGATCAAACCCAGGTCCCCCTCATTGCAGGCGGATTCTCTACCATCAGAGCCACCAGGGAAGCCTGCATTACAGAGCATGATGTTCTCTGAAGTCCAGTTTATTATAGGAAATTCTGTTTAGCTGATAGTGTAAACCATCAGGAGAAAAGACTGAAAGGTGAAATTAAAGAATGTGAATGATACCAAATTCTTTATGGTAAAATACAAGACTTATCCCCAGATTAAGAAAAAAATCCAATACAGAAGCATTTCTTAGTGGTAAAATCAGAGAAGGAGGTGTGAACTACTGGCCTGCTGCATATGACTAGATCCTCATGCCCCTAGCCCCTCTTCTAAAGCCTCTGCTTTGACGTTAAGCGGCAGAGCTGGCTCCTAGTTCCTTTCTTTCCTCCTGCAATAAGGAATGTCTCCTCTGTTCTGCTCAGTTAGTCAGCAAAATGTCTACTGAGGAAGGGGGTGAAATGAGAGTAAATATCAGGGTACATTTAAATGTAGAGTATTAATGGTTAAAACTTCTTTCTTAGGATGAAGTGATCATGAACAAACCCAAAGTCTCTTAACTGCTGAGTGTTTTGGTTTAAAAACCTTAGTGCATTTTTAATGCAGTAAAAATTTCAAATCCGGATTCACCTTTCAGTTCAATTCAGTTCAGTTCAGTTGCTCAGTCATGTCCAACTCTTTGCGACCCCATGAATCACAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGCTCACTCAAACTCACGTCCATCAAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTTCTGCCC EMBV3_36785 GATGTGTGACCAGAGGCACAGCCAGCGCAGAAAACCACAGCTTGGCGTATGACATTGAAA Gene BVT0101_014088 + 0 NULL GK000007.2:17936026-17939660 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215809 TCONS_00215811 TCONS_00215810 TCONS_00215812 1 XLOC_131080 Coding TCONS_00215810 XLOC_131080 Coding Coding ELAVL1 7:17936103-17976489 j TSS161101 5418 1 TCONS_00215810_4 466 7 0.866014609384673 0.00251923894449239 0.00110805904555808 0.00169814465372286 0.000435012012111959 0.000517441739871109 0.000694990071601117 0.000974437419438694 0.00138824805148762 0.0013449729313853 1.85292699709171e-09 7.97644180088619e-09 5.51099249403644e-05 0.000167463568576235 0.00019280030789658 0.000596970552002683 0.000156788178095729 2.23290307608641e-13 1.50053313209976e-05 0.000704739551671691 0.000790799075418494 0.000690264727443185 2.84901199504849e-07 4.65670857965316e-07 0.000692899167926533 0.00411434274125724 0.00207787198081402 0.00162333340587199 3.42854331293159e-35 1.03896357057701e-06 6.61426350241915e-05 NM_001076454.2 ELAVL1 Bos taurus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) (ELAVL1), mRNA. 0.0 2024 100.00 0.206902916205242 NM_001419.2 ELAVL1 Homo sapiens ELAV like RNA binding protein 1 (ELAVL1), mRNA. 0.0 1636 92.49 0.205795496493171 TCONS_00215810_4 sp|Q15717|ELAV1_HUMAN ELAV1_HUMAN ELAV-like protein 1; 0.0 656 97.23 0.695278969957081 3 coding 0 0 0 0 -0.0526866506219039 0.687969246312557 0.0101242559343021 0.850414892594838 GGAGCGGGTCGTGCGCGCTGAGGAGGAGCCGCCGCCGCCGTCGCCGTCGCCGCCGCTACCGCCAGCGCTACCGAGGCCGAGCGGAACCGTTAGCGCCGCGCCGCCGCCGCCCGCCTGCCCAGGAGCAGCCCCGGGCCCACCCGCCCGCGTCCAGATTTTTTAAAAAAAATACAATGTCTAATGGTTATGAAGACCACATGGCCGAAGACTGCAGGGACGACATCGGGAGAACAAATCTGATCGTCAACTACCTCCCTCAGAACATGACCCAGGATGAGCTACGAAGTCTGTTCAGCAGTATTGGTGAAGTGGAATCTGCAAAACTTATTCGGGATAAAGTGGCAGGACACAGCTTGGGCTACGGCTTTGTGAACTACGTGACTGCCAAGGATGCAGAGAGAGCGATAAACACACTGAATGGCCTGCGGCTCCAGTCAAAAACCATTAAGGTGTCATATGCGCGCCCAAGCTCTGAAGTCATCAAAGACGCCAACTTGTACATCAGCGGGCTCCCGAGGAACATGACCCAGAAGGATGTAGAGGACATGTTCTCTCGGTTTGGGCGGATCATCAACTCACGAGTCCTTGTGGATCAGACCACAGGTTTGTCCAGAGGGGTTGCGTTTATCCGGTTTGACAAACGGTCGGAGGCAGAAGAGGCAATTACCAGTTTCAATGGTCATAAACCCCCAGGTTCCTCCGAGCCCATTACAGTGAAGTTCGCAGCCAATCCCAACCAGAACAAAAACGTGGCGCTGCTCTCCCAGCTGTACCACTCACCAGCTAGACGGTTCGGAGGCCCCGTCCACCACCAGGCGCAGAGATTCAGGTTCTCCCCCATGGGTGTAGATCACATGAGTGGGCTTTCTGGTGTCAATGTCCCGGGCAACGCTTCTTCGGGCTGGTGCATCTTCATCTACAACCTGGGCCAGGATGCCGATGAGGGGATCCTCTGGCAGATGTTCGGCCCGTTTGGCGCCGTTACCAATGTGAAAGTGATTCGCGACTTCAACACCAACAAGTGCAAAGGCTTTGGCTTTGTGACCATGACAAACTATGAAGAAGCTGCCATGGCCATAGCAAGTCTGAACGGCTACCGCCTGGGGGACAAAATCTTACAGGAAATTGCTTTCCCAAGCAGGTCCCATTGCCACCTGCTGCTCACTCAGCTGAGGGCCCCCGGCTGTGGCAGCGGGCCAGTCTGCCGTGGGCCACCGGCGGGAGGGGGACCGCACGCCGGGCCGGGCCAGGCCCTGCGGAGGACACGAGGGGTCTCCTACGCCCAGGCGCCAATGGGAACGGACCAAAGAGTTTCAGGGGAACTCCAGTGTATTCCAGAGTCAGATCTCAGCTGCAGGCACGCCTCAAGATGCCTTGCTCCTCCGACACCCCGAATTCCTGTCCACACGTTGCATGCACAGTGCCCCCACAACAGCGGATATTGTCGACCCCTGTCTTCGCTCCAGTTTCCGAGCGCATTGACCACAGCTCCAATGCGTCAGATAGCTCTATTTTTTAACGACACAGAAACATTTGAGCATTGTATTTCTCGCATCCCTTCTCGTGAGCGCTAGGCTTTTTTCTATTTTAGTCGGGTTTTGTTTTGAAACTTTGCTCTCCTGTGAACACTCAACAGAAAAGTACTTACTTCCTGACAGTTACCTATTAACAAAAAAAACAAACAACAACAACAAAAAAACACCCTTTGATTTGTAGTTTTAAAGATTAACCCTCAAAGTTCTCTTCATAACTGCCTTGACGTTTTGGGTTGTTCTGTTAATTTTCTTTTGCTTTTTTGTGTTTTTTGTTTGTTTTTACTTTTGCATTTAAGACCATTAAATTTGATTTTGTTTTGCTCGAATTTTGTTTTGTTTTTTATTTTACCTTTTCTTTCTTTTTGGCTAGGTAAGGTACAGACAGCCCAGCATTCAGGGAGGATTCGTAAAATTTTAAGCAACAAATATACTTGCCTCAAGACAAAGCATTTCCGGATCTGTGATGTTAGGATTGCGCCCGCACAGGTGGGGTTTTTCCCCAAACGGGGAGTGGGCAGGAGAGTCCGAGAGAGGGCCTGAGAGGTAAACAGGCAGGGCCCCAGGCTCCGGGCAACCCCTCAGGAGCGTGATGTGATTTTTTTTATAAATAACCAGTGTATGAGAGAGTCAAAACCACCATAATTTAGTACCAGCGGTTTTTAACCTTGACACGAGAGACTAATAAAGCATGTGAACGATAGGCTGTTTTTTAGTTATCGATATCATGGAATTGCGGCTTTATTTATTTATTTATTTATTTAAGTGGAAGTCACTGGGCTGTAGGCACAGCCTTCCGCAGAGTGGGTCAGTGTTCTGAAACACCACCCCACTCCCGCCCTCGACCATTTGAGGCTGCCCGTCCCCCCATCCCTTCCCTCATGCTTTACTGAGGGACTGCCAGCCGCTTACCTGAGCCTCCCCAGTTTACCATGCAGCCCTCTTCTTACCCCACAAAGGGCCAATTTCATCCCTTGAGGTCTTGTCTCACAAGTTGGCCAAGTGCCACGGAGGGCCTCCTCCCTCCTGTAGGATCTTCCAGATTCTAAGTCCAAGCCAGCTTACATGCCTCCTCCTGGATCCAAGGCCCATTTGCCCGGACTTGACATGAAGAGGGTCCCCACTGTGTGTACCCCAGAGCACTCCACACCCCAGGCCTGGGATGCTCTCCTAGAAAAATATACCATGCAGGTGGTGCCAGCCTCGGGCTAACATCTTCTCAGAGCAGGTGAGGCTCCCCGTCCTCAGGGTGGCCCTTAGGCCTCCTCGCTGACACAGCCTGCCAGCCCACGCTGGCATGCAGTCTCCTACGAGAACTCTGTCAGAGGCCTGCACTGCGGAGCGACAGGCTCACAGCCAGCACCATAGCCCGTCCCCTCGTCCCCTCTGTTTTATTGGGATCACATTGGTTTTCCTGATGGTAGTACACATGAGATGGAAACGTGAAGCGCATACGGACCTCTGCGAGTTGCCCAGAGTATCTCAGTAAATGTCTCGTTTTACGCGGTCCCCACTCTGAACAGCCTTCTGGCTAAAAACCCTCATGTGTTTCTTTGGGAGTTTTAATTTGCGAGCGTGCAGGAGGATACTGCCTTTGACACGTTCTACTTCCGAAAAGTAATCGTCACTGCCACGGAAGTCCCAGATGCTGGCCCTGTGTCCGAAAAATTCATTACATCGCTAAGCTTGTTTGCAAAAGGAAGACCTCATTTTTTTTTTTCAAGTCACAATCTGAAAGAAACCATGTTTAAAAAAATTTTTTTTTTAACCTAGATCAGTCATATTTGTATCTTGTGAAATGAATGCTCTCCTTTTCTTTAAGAATTTTGCTGAAAAAGAATTGAGGATAAGATGATGTTAATTTATGAAAACTTTGGTTTGGCACATAAATACCAAAGAGACTCTGACTGAATTCTCTTGGCCTGTGTGACTGGCCCTCCTAGTTGTTCACTCAGCAGCTGCACCTCTGTGTACCTGGTTCCAGTCAAATAATCCACTCTTTACCCCTCAGCTCTGCCTTTCTTCAGCTTTTCAATGTCATACGCCAAGCTGTGGTTTTCTGCGCTGGCTGTGCCTCTGGTCACACATCCCGTGACTGCGACATCCTCCCCCACTGCCCCCCCTCTTGCCAGAATAGCCAAAGGCTGGGCTTTCTCAGCCGGCGGCACCTTCCTTGTTCCCCCAAGGTGAGTCTTTCCCTCGCCAAGGGCAGCTGCCTTAACCTCCGAGAGTCTGCACTTGGCGTTAGTGCTGGAAACCCACCTTCCAGGCTCTGAACCTCGCTGCTGTAGGGAGCCGGTCCTTGTGAGCTGGCAGCTGTGGTGGGGAAGCCCTGCTGGATCAGACAGACGTGAGAAGCCTGAGACAGCCATTGACAATAACTTAGCCAGTTGGCCTCCAGACTAGGGCCGTGGACTGACCCCAGTCTGCCGTTGGCCTTGAAAATCAGAGTTAATGTCCCCCTGGCTGTCCCATTTTGCATCCATCCCTGCCTGACACAACTTCCCTGTGCTTTCCACAGCCGTCCTGGGCTGGATCACAGAGAATGAGACCAAGCCACCAAGGGCCCCTCTTCCCACCCCACGACCCCCACCCCAGCCCTCCTCCATCTGAAATCCCTCCCATCTTCCCAGGACCCACGGTACCTCCTGGGACCTGAGGCAGCACCTCAGGAAACACCTGCTGCTCATCAGATTCCCAGGCCCAGCCCTCACCCCAAGTCCTGAGAGCCCTCCGCTGAGTGGCAGCGGGAACTGACGCTTTCTTGCAACGGCGGTAGGACCCCCAGCAGGGGTCACATTTCCACGCCTTTTGATTTTGCCTCTGACTTCTTAACGATTGTATTTTTCCACAACCTTTTGGTGACAAGAGTCAGTTTTCTGCTTGGTCGTTAAATAACTTAACTCCTCGTAAGTCCCCGTGAGGACTGAAGTTAGGCTGACCGGTGGTCTGCAGCGACCCGGGAGGACTGTGTTTCACTTCTGCCAGGAGAGAAGGCTTGTCCGTTGGTCGGGGCCACGTCTTTACTGTGTAACGTTCCGTGTATAGTGACTTGCTCTGGGCCGGTGGGGGGCACTTTCCCAAGTGGTTCCCACGTTGTACAGTAGATGGGTAGACCTTTTGTATATTAGTATGTTTTAAGTTATTGGTTTGTTTTATATAAAATAATTTATTTTTCAGGTACCATTTTTCATTTTAACTTTGTTTTTACATGGGTTTGTTTTCAATAAAGTGTGACACTGCTGTCCAAAAGCCAACAATAAAATGAATCCCATTGTGTTCTTTGGAGATTGCTTATGTAACTAGCTTTTTTTTTTTTTTTTTTTCTTTTTCTTTTTTTTCTTTCTTTTTTTTTATTTTCAGGGGAAAAAAATGTCCTCCTCAGTTTTCCATCCCCCCAGTTTGCCTTTTTATCCTTGTGAATAAATGTTCTTTAGTGTTTTAGGAGGAAAAAGCAAACCTAGATTTTGATAATCCAGAAGACTTCAGATTAATAAAGAAACTTTGAAAGAAGACCATTTTTCAAAATTTTAGTGAAGTGTGAATATTTTTTGTCAATGGCTTTCTCAAAGAGAATGAAACTTTTGCACCATTTTCAGAGTTTTTATAGAGATGCCAAATTGATATATTTACATGTAATGAAAACATGAAAAAGTTTTATTAAACAATTGTTCATAGCTGTGTAGACATTTTAATTCAGTTTTCAAAGCTCTCAGAGTGTATTTTTGGAGTACGGAGTGCTCACAGTGTGGGGCCTTACGATTCCAAAACAACGCGATTGTCCGAATACATAGTCCTTCCCGCAGGTATCAGGTTTGTGTTAATCTCTGTATGTTAACTATGACTGGAATTCTGTGATATTTTGGTAATAAATGAAGTGGGATCG EMBV3_29288 TTGATGGATATATCTTCATTGATAGTAAAGACCCAGAGTATAAGAAATTTTTAGAAACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18184 TATTTACGAGTGACAGAGTCTGAGAGAAGGAGCGAGGGTGGCTGCGGGACAAAGCTTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42215 AACTGAGCCAAGATGCTACGGAATCTTCTGGAGGATAATGGAATTCCAGTGCATCTGAAG Variant GeneID:327688|COX7A2:NM_175807:5_cdna 98^187 1 EMBV3_34680 GeneID:327688 9 GENE COX7A2 MGC127784 cytochrome c oxidase subunit VIIa polypeptide 2 (liver) EMBV3_40177 CCTGATGCCGGACTCCAGGTCTGTGTCGGGATGTGACGTGGCAGATGGTGCGTCTGTTCT Gene GeneID:526069|SOHLH1:XM_002691613:254_cdna Constitutive 0 NULL GeneID:526069 11 GENE SOHLH1 NULL spermatogenesis and oogenesis specific basic helix-loop-helix 1 EMBV3_20645 GAGTACTAAAGCATTTTAAACAATAACTGTCTTGTACATTTTTTGAATAGAGGTCACTCC Gene GeneID:506574|LRIG3:XM_002687553:563_cdna Constitutive 2 NULL GeneID:506574 5 GENE LRIG3 NULL leucine-rich repeats and immunoglobulin-like domains 3 EMBV3_43521 AATGGAAGACATCCTTCGCTGCTTCATCAAAGAGGGCAACGCCGAAATGATCCGCCAGAT Gene GeneID:536462|ARMC9:NM_001046418:139_cdna Constitutive 0 NULL GeneID:536462 2 GENE ARMC9 MGC137336 armadillo repeat containing 9 EMBV3_31113 ACTCCAGTGCATTTGGGAACCACTGTTTATGGGACTTACTTAAAGGGAATGCTGCCTGCC Gene BVV0102_178039 + 0 NULL GK000026.2:40291245-40293281 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152391 TCONS_00152390 TCONS_00152386 TCONS_00152389 TCONS_00152385 TCONS_00152388 TCONS_00152387 TCONS_00152392 1 XLOC_092325 Coding TCONS_00152390 XLOC_092325 Coding Coding MCMBP 26:40291727-40331120 = TSS113671 3896 1 TCONS_00152390_3 642 0.0585215605749487 16 0.901502843216897 0.000933142072880467 0.00199472092321917 0.00095267445395078 0.000223205833201835 2.21761411811279e-07 5.11101482691219e-07 7.90085404537487e-09 2.12676119132564e-10 0.00176233108321554 6.5085197258983e-06 1.7185093541161e-171 2.51178087983273e-06 1.34351644285625e-13 8.44100967480185e-05 0.000232567766118523 0.00506176286822982 0.00186009075834289 0.00420679397203871 0.00011409902337563 0.00143056964105435 3.20237586490231e-07 0.000111328400907013 0.00267358644811731 0.00353211819925994 0.000380664372639252 0.000379687684711685 0.00344591383167388 0.000548172847134761 0.000813310988602665 0.000282684271291821 XM_005225779.1 MCMBP PREDICTED: Bos taurus minichromosome maintenance complex binding protein (MCMBP), transcript variant X1, mRNA. 0.0 6845 99.92 0.975359342915811 NM_024834.3 MCMBP Homo sapiens minichromosome maintenance complex binding protein (MCMBP), transcript variant 1, mRNA. 0.0 3647 80.62 0.989989733059548 TCONS_00152390_3 sp|A5PJM5|MCMBP_BOVIN MCMBP_BOVIN Mini-chromosome maintenance complex-binding protein; 0.0 1337 100.00 0.998442367601246 2 coding 1 1 0 0 -0.138472591176018 0.712701026570734 -0.15099218809616 0.0605011189808039 GCGGGGAGGCCGGGCGGCCCGTGCCGCGAGGCTTCCCCTGCGTGGGAGGGCGCGGGCGAGGAGCGGCCGAGCCCCCGACGAGGAGCAGAGGCGCGCGGGACGCCCGGGCCGCGCCGGCTCCGGCCCGTCGGCGAGATGCCCTGTGGGGAGGATTGGCTCAGCCACCCGCTGGGCATCGTGCAGGGCTTCTTCGCTCAAAATGGAGTTAATCCTGACTGGGAGAAGAAAGTAATAGAATATTTTAAGGAAAAGCTGAAGGAGAATAATGCTCCTAAATGGGTACCATCACTGAATGAAGTTCCTCTTCATTATTTGAAACCTAACAGTTTTGTGAAGTTTCGTTGCATGGTTCAGGATATGTTTGACCCTGAATTTTACATGGGAGTGTATGAAACTGTTAACCGAAACACAAAAGCACGTGTTCTTCATTTTGGAAAATATAGAGATGTAGCAGAGTGTGGGCCTCAGCAAGAAGTTGATTTAAACTCTCCACGAACTACTACTTTGGAGAGACAGACATTCTATTGTGTTCCAGTGCCTGGAGAATCTATGTGGGTAAAAGAAGCCTATGTTAATGCCAACCAAGCTCGAGTCAGCCCTTCAACGTCTTACACCCCCAGCCGTCACAAGAGAAGCTATGAAGATGACGAAGATATGGATCTGCAGCCCAATAAACAGAAAGACCAGCATATGGGCGCCAGACAAGCAGGGAATGTTGGTGGTCTTCAATGGTGTGGCGAGCCAAAACGTTTAGAAACTGAAGCTTCTTCTGGACAACAGCTGAGCTCCCTAAACCTCTCTTCTCCTTTTGATCTGAATTTTCCATTGCCAGGAGAGAAGGGTCCTGCATGTCTCGTGAAGGTCTATGAAGACTGGGATTGTTTTAAAGTAAATGATGTTCTTGAGTTATATGGCATACTCTCTGTGGATCCTGTGCTAAGTATACTGAATAATGATGAAAGGGACGCCTCTTCGCTGCTGGACCCGATGGAGTGCACGGACATGGCTGAGGAACAGAGGGTGCACAGTCCTCCTGCCTCCTTAGTGCCAAGAATCCACGTGGTCCTGGCCCAGAAGCTGCAGCACATCAACCCCTTACTGCCTGCTTGCCTTAACAAAGAGGAGAGCAAGACCTGTAAGTTTGTTTCCGGTTTCATGTCCGAGTTGTCTCCAGTCAGAGCAGAACTGCTTGGCTTCCTCACTCATGCCCTTCTGGGAGACAGCTTGGCCGCTGAGTACCTTATATTACATCTCATCTCTACAGTATACACAAGAAGAGATGTTCTTCCACTAGGAAAATTTACGGTTAACTTGAGTGGTTGTCCACGGAATAGTACCTTCACGGAACACTTATATCGAATTATTCAACATCTGGTTCCAGCATCTTTTCGTCTACAGATGACTATAGAGAACATGAACCACTTGAAGTTCATTCCCCACAAAGACTATACAGCCAATCGCTTGGTCAGCGGGCTCCTGCAGCTGCCCAGCAACACTTCGCTTGTAATTGACGAGACTCTCCTGGAGCAGGGGCAGCTGGACACACCAGGTGTTCATAATGTGACTGCCCTGAGCAACCTAATAACTTGGCAGAAGGTGGATTATGACTTCAGCTACCACCAGATGGAATTTCCCTGCAACATTAATGTTTTTATTACTTCAGAGGGGAGATCGCTCCTGCCGGCAGACTGCCAGATCCACTTACAGCCACAGCTAATGCCACCAAACATGGAGGAGTACATGAACAGCCTTCTCTCAGCAGTGCTGCCCTCTGTGCTGAATAAATTCCGCATCTATCTGACCCTTTTGAGGTTCCTGGATTATAGCATCTCTGATGAAATAACCAAGGCAGTTGAAGACGACTTTGTGGAGATGCGCAAGAACGATCCTCAGAGCATCACTGCCGACGATCTCCACCAGTTACTCATCGTAGCTCGGTTTCTGTCTCTCAGTGCTGGTCAGACAACGCTGTCAAGAGAACGATGGCTAAGAGCCAAGCAGCTGGAGTCTTTAAGAAGAGCCAGGCTTCAACAGCAGAAATGTGTCAACGGAAATGAACTTTAAAGGTCTGACATCTATAAAGAGTAATGGGCAAATTCTAGCCACATTATTGTAAAATTCAAATATCATTTATATCACATTGTTTTGTAGATAATTTGTATCAAAGAAACTGATGACTTTTCCTGAAATCACGCCTGGTAACATCTAAAGTTTATATAATATTCAGTAAGGGCTTTTACCTTACTGATTTTATGGAGCTTTTGAATTTTGTTTTATAATTATATAAATTAGTAACAATGTACAAAAATGTATTTGATATTAAAAATTTAATATTGATAATGTTGCTGATATACCATTTCCTTAGTTTCCTTAGCTTCAGCTAAGTCATAGGCCAGACTCTGTTGAAATAAGAAATGTGAACATCATTTGAAGAAAACTGTTGCAATTCCAAAGTCAAAGGAATTGCTCACTTCAGATTTTTGTCTCTCCAATGAACAGCGGGTCTGAATGTGCATAGTGGTCCAAGTTTGGGGAATGGAGCATACTTGCCGTTAATCACATATGTAGTATCATTTCCCAGACACTGGACCACACCTTTTTTCCATTTATTTAATAGTTGTTAACAACATGAAAAGCAAGTCTTTAAATGGCAGTGGTTCCCAGACTTTTGGGTTTCATGGACCAGTAATATTTCCAAAAATTGTGGGGGATTGAGAGTTGCCAATTTATTTTGCCAAGTAATGAAAGAAGTCACTGTATTATCGTTTTTTTTTCCATAAAAGAACAGTCTCAGAACAAGAGAGTCCTTTAAATGGAATAAATGTAGCTATTTTGGAAGGAAAAAAACGCACTATATTGTCCTTATTTTTCTCATTTTACTCCAGTGCATTTGGGAACCACTGTTTATGGGACTTACTTAAAGGGAATGCTGCCTGCCCTGTGAAGTTGTTTTGCCCAAAGAGGAAGAGAACAAAATAATTTAACTTTTAAAAAAATGCCTTCTTCAGAAAAAAAATTGGTTTTTATTCTTTTCCTAATAAATGTCATTTAGTTGCTTTGATGATTACCTTGCATTTTGAACTTCTTATATGTTTATCCATTAGTTCAGCTAACATTATCTGCTAGTCCAGGAATGCCCTGATAAAACTGTATGTAGGTAGGTTATCACCAAATTACAGTTTTAACAAATTTTTAAAGGAACAAAAATATTATCCATAGCTAGAATGCAAATTGATACAGCATAGTAGTATAATTGTGGCATCGAGAATCTTTGGAAAGGTTAGAACATTACTTTGTTACACTACCACTGGTTACATATAAAAATTAGTTTCTTTAGTCAGTAATGTAGGAACATTAGAGATCAGTTAAATGATTAGTTAAATTTGGCATTCCCCTAGCCCCGGAGCCTGAACTGAGAAAACAGGGTCAGCCTTGAAAATGGAGCAATCTACTATGCCTCATGAACTGAAGTGGAAATTATTAGTTCTTTAACTTTTCCTAAACTCAAATCTATTTTTATAAACTAATGTAAATAATCTGTTTATACTTAGAATTCTAACTGGTTTTCATTTTTATAACTGGTAGACTAGACTTTCCTTAAACTTTTAGAAATAAAACAAAGGCTCAGCTGGATTTGTGAGAATAAACTTCAACAGAGTAGGTTAGTTCCTGTGCGTTTACTGTGCCAATGTGGATTGTAATTTACCAAAGAGAAGTACAGAATTTGCCTGGTCTTACAGAAAAGTTCCCTTGAAAGGAAAACCCTCTTTCAAATAAATAAAACTTACCAAATTACTAGTACTTTGGGCTGTTTTTCATGAATTATGAGACTCACCCCATGTGATCTGTGTGGAAAATTACCAGAGATGAAACTTCAGTATGAGATGATACAGCAT EMBV3_42406 CTTGCCTGCATCCTCTGATTTATGTGTTGAACAGCAGCTGACTTCTTCCTGCTCCCTTCC Gene BVV0102_336230 - 1 EMBV3_25569 GK000011.2:87652885-87834503 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11829 CTCAGAGACATCTTGTCGAGACCTTTCCAGCTCACCCCCAGGGCCTTATGGTCAAGAAAT Gene GeneID:512665|PRKAB2:XM_002686088:31_cdna Constitutive 0 NULL GeneID:512665 3 GENE PRKAB2 NULL protein kinase, AMP-activated, beta 2 non-catalytic subunit EMBV3_30119 GATTTAGAAGTTAATCCTACACTAGGCCAGGACTTCTACCCCAGACTCGTCTCTCTCCCC Gene BVT0102_235565 + 0 NULL GK000008.2:51501433-51614614 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11341 ACAGAAGGGGACTCTGGGGTTGGGGTGAGGGGATTCTGTGACACGTTTGTGAGTAAAGCT Gene GeneID:614193|MIIP:XM_002694038:103_cdna Constitutive 3 NULL GeneID:614193 16 GENE MIIP NULL migration and invasion inhibitory protein EMBV3_07130 TCTAGTAACCAGAATCCTTCCCCATGTGTTTCCCAGCTTTGAGGGTGGTAGCCACTTCTC Gene BVV0101_044808 - 1 EMBV3_01280 GK000001.2:71623387-71629567 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30461 ATGAGCCCGTGATGACTGCATTGGAGACTGTACCGTCCCGTGTTTGGTATCTGTTGAACT Gene BVT0101_064495 + 0 NULL GK000027.2:14141241-14164062 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09508 GCACTCACAGATGGCTCGCTGGGTGACATGATCTTCTTCCACTCCTATAAGAACCCAGGT Gene GeneID:444988|DHPS:NM_001003657:17_cdna Constitutive 1 NULL GeneID:444988 7 GENE DHPS DYS MGC128506 deoxyhypusine synthase EMBV3_15883 GTCTACATGAGGCCCTGTGTCACCCTCCCTGCAGACAAAATAGTCGCTGTGTTTTACACG Gene GeneID:510452|OR4X1:NM_001075450:16_cdna Constitutive 0 NULL GeneID:510452 15 GENE OR4X1 NULL olfactory receptor, family 4, subfamily X, member 1 EMBV3_25438 AGGGTAGAGACTCATTCCTCCCCTGTTTCCTCATGTCCGACACTGTGTTCAAGGAGAGTG Gene GeneID:100138783|LOC100138783:XM_002691638:339_cdna Constitutive 0 NULL GeneID:100138783 11 GENE LOC100138783 NULL similar to Uncharacterized protein C9orf114 EMBV3_40461 GTCAGTGAACTGCCCCCAACTGGGCCTTTTGAATCTGGGAAAGACATCCATAAAGAGGCA Gene GeneID:617034|CD83:NM_001046590:152_cdna Constitutive 0 NULL GeneID:617034 23 GENE CD83 MGC137575 CD83 molecule EMBV3_37366 TTCATGTACCTGTTGGCTGTTTGTCTTCTTTGAAAAATGTCTATATAGGTTCCTTGTCCA Gene BVV0102_177930 - 1 EMBV3_21435 GK000030.2:15013246-15108750 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34520 TGAAGTGACTGGGAATCTAGCCCTGGGTTTATCCTATTTCAGTGGTCATGGTGAATGGGG Gene GeneID:533087|EZH1:NM_001102151:163_cdna UTR3_Alt 2 NULL GeneID:533087 19 GENE EZH1 MGC157156 enhancer of zeste homolog 1 (Drosophila) EMBV3_24899 TGGGATGGAAGTGGGGGTTAAAGGAATAGAGCTGATGTCCTGAGTTGGTTGAAGCAGCAG Gene GeneID:614984|UTP6:NM_001099140:283_cdna Constitutive 0 NULL GeneID:614984 19 GENE UTP6 MGC137794 UTP6, small subunit (SSU) processome component, homolog (yeast) EMBV3_08541 TACTGGCGAGTTCAAATTCCTGAAGCCGATTCTCCCCAATCTCGCATTCCAGAGCATAGG Gene GeneID:787102|PCDHB7:XM_002689253:154_cdna Constitutive 0 NULL GeneID:787102 7 GENE PCDHB7 NULL protocadherin beta 7 EMBV3_31250 AGGAGAAGACAGTGAAGCCTTAGTACATCACAACAGTTTATTTTAATGACAACAAGTAGC Gene GeneID:512153|MTERFD2:XM_002686595:66_cdna Constitutive 2 NULL GeneID:512153 3 GENE MTERFD2 NULL MTERF domain containing 2 EMBV3_40413 GAAAGACGAGTCAAAGGTGGAAGACGACCCGAAAGGCAAGGAGGAGAGCTTCTCGCTAGA Gene GeneID:507344|GBX2:XM_002686566:11_cdna Constitutive 0 NULL GeneID:507344 3 GENE GBX2 NULL gastrulation brain homeobox 2 EMBV3_22233 GCACTGTGGGTTCCACATGCTGCCACTACATTTAAAAACACAAAGCTTTGTCCACCATCC Gene GeneID:525716|S100B:NM_001034555:63_cdna Constitutive 1 NULL GeneID:525716 1 GENE S100B MGC128275 S100 calcium binding protein B EMBV3_19154 CAACCGCCTCCTAGTCGTGCTGATTAAGGCCAAGAACCTCCACTCTAACCAGTCCAAGGA Gene GeneID:540545|SYT13:NM_001098115:96_cdna UTR3_Alt 2 NULL GeneID:540545 15 GENE SYT13 NULL synaptotagmin XIII EMBV3_09318 TGGGCCAGGCTGAGACAGGAGCGTTCCTGCCCAAGTACTGAGCGGTTTAAATCCTGTAGA Gene GeneID:507008|LRSAM1:NM_001075296:43_cdna Constitutive 1 NULL GeneID:507008 11 GENE LRSAM1 MGC139439 leucine rich repeat and sterile alpha motif containing 1 EMBV3_10382 GTGTCACCTCTACTTACAAATCTTCTCACTATTTTGCCACATAGATGAGTTAGTTCTTGG Gene BVV0102_354466 - 1 EMBV3_27335 GK000002.2:2025068-2181853 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243419 TCONS_00243423 TCONS_00243424 TCONS_00243425 TCONS_00243422 TCONS_00243420 TCONS_00243421 TCONS_00243418 TCONS_00243426 2 XLOC_150080 XLOC_150081 NonCoding TCONS_00243424 XLOC_150081 NonCoding NonCoding - MT:0-10168 - TSS183097 8068 2 TCONS_00243424_11 158 2 0.206648962329104 0.0286635825114442 0.0340900277985004 0.0205294602054705 0.0271408119365501 0.0372387757550663 6.73303897598583e-18 0.0233356593704019 0.0210131216034325 0.0240176462842004 0.0924487000917009 0.0530234659615676 0.0378935946767471 0.0105159701142548 0.0500912092751347 0.034434593750725 0.815023712291691 0.580883829379209 0.800971954054633 0.0170898393775506 0 0 0.327818663652801 0.380232513677686 0.438904894598179 0 0 1.6478895192944e-14 0.0777245261901415 0.0441874955120282 0.101752773194458 XM_005200960.1 LOC101905553 PREDICTED: Bos taurus uncharacterized LOC101905553 (LOC101905553), 1e-93 351 87.32 0.0350768468021815 NM_001190452.1 MTRNR2L1 Homo sapiens MT-RNR2-like 1 (MTRNR2L1), mRNA. 0.0 1032 76.86 0.17835894893406 0 noncoding 0 1 1 1 0.722720652112842 0.0967089894237901 -0.014824743364922 0.766917672903768 ATTCGGTTCATTCTAGTCCTTTTTGAGTTCACTCATAGGCTAGGCTTACAGCTAGGAGGATAATTAGGAAGAGGGCTATGGTAAGCATTGTGTTTAGATTTGCTGTTTGTGAGGCTCATGGCAGTGGTAGGAGGAGTGCAATTTCTAGGTCAAATAAGAGGAATGTGATGGCTACCAGAAAGAATTTTATAGAGAAGGGAAGGCGGGCTGATCCTATGGGGTCAAATCCACATTCGTATGGGCTTGTTTTCTCAGAGTATACATTTAGTTGGGGAAGTCAGAATGCGATGATGACGAGTAGGGTGGCTAGTGTAAAATTGGTCAGGAGGGCTAGTATTAAATTTATTATTCTTTTTCGGACTAGACCGAAACTAGCTGATTGGAAGTCAGCTGTACTAGTTAATACTAAAAGAATAGGAGCCTCATCAATAGATAGAAACATAGAGGAAAAGTCAGACTACGTCTACGAAATGTCAGTATCAGGCAGCGGCTTCAAAGCCGAAGTGGTGGTTAGAAGTAAAATGAAATTTTAATTGGCGGAAGAAGCAGACAATTAAGAAGGTGGACCCAATGATGACGTGGAGGCCGTGGAAGCCTGTGGCTACAAAAAAAGTTGAGCCGTAAACTCCGTCGGAGATAGTAAAAGGTGCTTCATAGTATTCTGAGGCTTGTAGTAGTGTGAAGTAGACTCCTAATGTGATGGTGATAAATAGGGCTTGTAATATATGCTTTCGGTCCCCTTCTATTAAACTATGATGGGCTCAGGTAATAGAAACTCCGGAAGCCAATAGGACAGAGGTGTTGAGCAGTGGGACTTCTAGGGGGTTTAGTGGGTGAATGCCTGTTGGGGGTCAGCAGCCGCCTAGTTCAGGGGTGGGGGCGAGGCTTGAGTGGTAGAAAGCTCAGAAAAATCCGGTAAAGAATAGTACTTCGGAGATAATAAAAAGAATTATTCCATAACGGAGGCCTTTTTGGACAGCTGGGGTATGGTGCCCTTGGAAGGTGCTTTCTCGGATAACATCTCGTCATCATTGGTATATTGTTAGTATATTTGTTGTTAGGCCAATTATTAGCAGGGTCATTGAGTTAAAGTGAAATCACATGGTTAGGCCGGATGTTATTAAGAGGGCAGACAAAGCTCCTGTAAGAGGTCAAGGGCTTGGGTTTACTATATGATAAGCATGAGTTTGGTGTGTCATTATGTGTTGTCATGCAGATATAGGCTGACTAGGAGAGTGAATACATAGGCTTGGATTATAGCTACTGCAAACTCTAGAATTGTTAGTAGGATTAGAATGGTGAATGTAATTAGAGCTGTTGTAGTGCTAATGCTTATTAGTGCAAGTGTAGCTCCTCCGATTAGGTGAATTAATAGGTGTCCTGCAGTGATGTTAGCTGTTAACCGCACGGCGAGGGCTATAGGTTGAATAAAAAGGCTGATAGTTTCAATAATTACTAGTATTGGGATTAGTGGAGTGGGTGTTCCTTGTGGTAAGAAATGGGCAAGTGATGCTTTAGTTTTATTGCGGAATCCTGTAATTACGGCTCCTGCTCACAGGGGGATGGCTATGCCTAGGTTTATTGATAGTTGTGTTGTTGGTGTGAATGAATGGGGTAATAGGCCTAGTAGGTTTGTTGATCCAATAAATAGGATCAGAGATATTAATATTAATGTTCATGTTTGTCCTTTAGAATTGTGGATACTCATTATTTGTTTTGATACAAGTTGAAGTATTCATTGTTGGAGGGTTACAAAGCGATTGCTTACTAGTCGGTTTGATGTTGGGAATAGTAGGCTTGGGAATAGTACGATAAGGGTTACGAGAGGGAGACCTAAAATTACAGGGGTAATAAAAGAGGTAAATAAATTTTCGTTCATTTTGTTTCTCAAGGGGTGTTTTGTTTTAATATTTTTGTTGGTGTCAGTTCTGGATTGTGATAAAAGTTGTGTTTTGAAACTTTTAGTTGAAAGATGATAAAAAGGGTCAAGAATATTGATAAGATCATTGTCAGTCATGTTGACGTGTCTAGTTGCGGCATGTCACCAAGGAGAGTATATGGCTCTCAATCTCTAACTTAAAAGGTTAGTGCTATATAGCTTCTTAGTGATTTTATAATATTGACGCAGATCATTTTTCAAAGTACTTTAGTGGGACTAACTCAAGGACAATGGGCATGAAACTGTGGTTTGACCCGCAAATTTCTGAGCATTGACCGTAATATAAGCCTGGACGGGACGATATAAGGGTTGTTTGGTTTAGACGGCCTGGGATTGCGTCTGTTTTTAGTCCTAGAGAGGGCACAGCTCATGAGTGTAATACGTCTTCAGAGGAGACTAACATTCGGATTGTTATTTCTATTGGTAGTACAACTCGATTATCGACTTCTAATAGTCGTAGCTCCCCTGGCTTTAATTCTGATGTTGGAATTATGTAGGAGTCGAAGCTTAAGTCCTCATAATCTGTATACTCATAGCTTCAGTATCACTGATGTCCTATGGTTTTTACTGTAAGAGATGGGTTATTGATTTCATCTATTATGTATAGAATTCGTAAAGAAGGAAGAGCAATTAGAATTAAGATGATGGCGGGCAGAATGGTTCAGATTGTCTCTACTTCTTGTGCATCTATCGTGCTTGTATGGGTCAGCTTTGTCGTTAGTATTAGTGAAATAATGTAAAGTACTAATGAGCTAATTAAGAAGACAATTATTAGCGTGTGGTCATGAAAGTGAAGTAGTTCTTCTATGATTGGTGATGTTGCATCTTGGAATCCTAGTTGTATGGGATATGCCATATGAGGTGTACAGGACTTTCACTTGTAACTTAACTTTGACAAAATTATATAATGTTTTACTAACACCTCGTTTATTGAGAGAGACATAGAGGTTATGATGTTGGCTTGAAACCAATAGTAGGGGGTTCGATTCCTTCCTTTCTTATTTTAGGTTAACATAGGTGGGTTCTTCAAATGTGTGATATGGTGGAGGGCATCCGTTTAATCATTCTAGATTTGTCGTGGTTAAGTCTACAGTCAAGACTTCTCGTTTAGATGCAAATGCTTCTCAGATGATGAAAACTATTAGTATAACTGCTGTTAGGGAAATGAATGAGCCTATTGATGAGATAGTATTTCATATTGTGTATGCATCTGGGTAGTCGGAGTATCGTCGAGGCATGCCAGATAGTCCTAGAAAGTGTTGTGGGAAGAAGGTTATATTGACGCCTACAAATATAATTGCGAAGTGGATTTTGGCTCATGTATCGTTGAGAGTATAACCTGAGAATAGTGGGAATCAATGAACAAATCCCCCTATAATAGCAAATACAGCTCCTATTGATAAAACATAGTGGAAATGTGCGACAACGTAGTATGTGTCGTGAAGAACAATATCGAGGGAAGAGTTGGCTAAGACAATTCCAGTTAAACCCCCTACTGTAAATAAGAAAATAAAGCCTAGGGCTCACATTATAGCAGGAGACCATTTGATATTACCTCCATGAAGTGTTGCCAATCAGCTGAAGACTTTTACCCCGGTTGGAATAGCAATAATTATAGTGGCTGATGTGAAGTAGGCTCGTGTGTCGACGTCTATTCCGACAGTGAATATATGGTGGGCTCATACGATGAAACCTAGAAATCCGATTGACATTATAGCCCAAACTATTCCCATATATCCGAATGGTTCTTTTTTTCCTGAGTAGTAGGTCACGATATGAGAGATTATTCCAAACCCAGGTAAGATTAAAATATAGACTTCGGGGTGTCCAAAGAATCAGAATAAGTGTTGATATAGAATAGGGTCTCCTCCTCCTGCCGGGTCGAAGAAGGTTGTATTTAGGTTCCGGTCTGTTAATAGCATTGTGATGCCGGCTGCTAATACAGGGAGCGAGAGTAGTAGTAGTACGGCGGTAATTATTACGGATCATACGAACAGAGGGGTTTGGTATTGTGACATTGCGGGGGGCTTTATGTTGATAATTGTTGTAATGAAGTTGATGGCTCCTAAAATTGAGGAAACTCCTGCTAAGTGTAAAGAGAAAATGGTTAGATCTACTGAAGCTCCTGCATGGGCTAGTGTCAGAGGTAGAAAATTTTTTCATAGTAAGTGTATTAGTTGGTCATAGCGAAATCGAGGGTAGGATGCTCGGATTCATAGGAAGGATATTGTGAGCAGTAGGGATTTAATGGTAAAATTGATTGTGTAGAGTTCTGGTATGTGTGGATTGTGGGATGTTCCTAGGAATAAAATTGCTGTAAAGATATTTATTATGATAATATTTGCGTACTCTGCTATGAAGAAGAGGGCAAATGGTCCTGCTGCATATTCTACGTTGAAGCCCGAGACTAGCTCTGATTCTCCTTCAGTTAAATCAAATGGAGCTCGGTTTGTTTCTGCTAGTGTTGAGATAAATCATATTATTGCTAGAGGCCATGCTGGGAGGATTAACCATATTTGTTCTTGTGTAGTAATTAATGTGGAGAGGGTAAAGGACCCACTTATTAGGACCACTGATAACAGGATAATTGCTAGCGTTACTTCGTATGAGATTGTTTGTGCTACTGCTCGTAGGGCTCCGATTAGTGCGTATTTTGAGTTGGAAGCTCAGCCTGATCAGAGAATGGAGTATACGGCTAGGCTTGATATGGCTAGTATAAATAGGACTCCTAGGTTTATGTTGATAAGAGGATAGGGTATTGGTAGGGGAATTCACATGGTTAAGGCTAGGCCTAAAGCTATGATAGGTGCTAGGATAAATATTGAGGCTGAAGATGTAGCGGGTCGTAGTGGTTCTTTAATGAAAAGTTTGATTGCATCGGCGATGGGTTGAAGTAGGCCATATGGACCTACGACATTTGGACCTTTTCGGAGTTGTATATAGCCTAGAACTTTTCGTTCCACTAACGTAAGGAATGCTACGGCCAATAGGATGGGAATAATTAGTATTAAGATGTTAATTATGAACATTTTGTTAAGGAGAGGATTTGAATCTCTGGATATAAAAGTTTAAGTTTTATGCAATTACCGGGCTCTGCCACCTTAACTAAGCCCTGTTCTAGGGCAGGGTTTTGTGTTGTCAGTTGAGATGTTATCATTGGTTGTCTTAAGGCGCTTGATTTAAAGTTGGCCTTATTTCTCTTGTCCTTTCGTACTGGGAGAAATACGTAATAGATAGAAACCGACCTGGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTGATAGCGGTTGCACCATCAGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTATTGTCGATATGGACTCTTGAATAGGATTGCGCTGTTATCCCTAGGGTAACTTGTTCCGTTGATCAAGTTTTTGGATCAATGAGCGATAGAGTGATTTGACTTGTGGGTCTAGTCTTTAAAATCGCTCGGAGGATTTTTTATTCTCCGAGGTCACCCCAACCGAAACTACCAACTCATGGAGATTGTTGTTATTCCTTAATGGTTAAATCTATTCTCTTTGGGTTGGTTAGTTAAAGCTCCATAGGGTCTTCTCGTCTTATTTGTGCATTCCCGCCTCTTCACGGGAAGGTCAATTTCACTGATTGGAAGTAAGAGACAGTAAAACCCTCGTGCGGCCATTCATACAAGTCCTTATTTAGAGAACAAATGATTATGCTACCTTTGCACGGTCAGGATACCGCGGCCGTTAAACAGTTGTCACTGGGCAGGCAATGCCTCCAATACTGGGAATGCTGGAGGTGATGTTTTTGGTAAACAGGCGGGGTTTGTGTTTGCCGAGTTCCTTTTACTTCTTTTAATCTTTCCTTAGATGCACTCCTGTGTTGGGTTAACAGTATAATCAATAAATTGTTTATTGTTGGATTATTTTTATTGACTGTTAGTGGTCAGAGTATTATCAGGCACTGACTTAGACTTATGCAAGGAGAAAATTTTTCTTGTTACTCATATTAACATTATTGCTTCTATTCTATAATAGATTAGTCCAGTATTGGGGCTAGGAGTTAATCATTTGTTGTTGGAATCTATTTAATTTTTGTTGTTGAGCTTTAACGCTTTCTTAATTGATGGCTGCTTTTAGGCCTACTATGGTAGTGTTAAATTTTACTCTCTAGTCAAGGTTGTATCCGTTTCTAAAAGGCTGTACCTTTTTAGACTAACTTTTAAAGCTACAGTGGGGTTTATTTGAATTTTTGGTATCTTTAAAGCTGAACTTAGATTCATTTTCTGGACAACCAGCTATCACCAGGCTCGTTAGGCATGTCACCTCTACTTACAAATCTTCTCACTATTTTGCCACATAGATGAGTTAGTTCTTGGTAAACTGTTTGTGAGTAGCTCGTCTGGTTTCGGGCTGCTTAGCTAAAATTCATTTTGTTAAGTCTTATACTAGTTAATTCATTATGCAAAAGGTACAAGGGGTAATCTTTGCTTTTTTATACTTTTAGTTTTTTTCTTTCATCGTTCCCTTGCGGTACTTTCTCTATAGCGCCGTACTTAGATTTCTATCTCCTATACTTTAAATTGGGATTAAATGTTTTGTTTTATTCTATCTTGGTTGTTTAGTCGAGAGGGTATCTTTGGGCTAGGTCTAGTTCAAGATATTCATAATGAATGAAGTCTTCTAGGTGTAAACTGGATGCTTTGTTTAAGCTATATCTTGATTTATCCAAGCACACTTTCCAGTATGCTTACCTTGTTACGACTTGTCTCCTCTCATGTAGCTAGTGCGTTTAAATAGGGTTAGATGCACTGAATCTATTTGAGGAGGGTGACGGGCGGTGTGTGCGTGCTTCATGGCCTAATTCAACTAAGCACTCTATTCTTAGTTTACTGCTAAATCCTCCTTTGGTTATTGGTTTCATAATAACTTTCGTGCTTGATTCTCTTGGTGTAGAGAATGTAGCCCATTTCTTCCCATTTCATAGGTTACACCTTGACCTAACGTTTTTATGTATCATAATTACGCTTACTTTTTTTCCTTTTTAGGGTTTGCTGAAGATGGCGGTATATAGACTGTATTAGCAAGAATTGGTGAGGTTTATCGGGGTTTATCGATTATAGAACAGGCTCCTCTAGAAGGATATAAAGCACCGCCAAGTCCTTTGAGTTTTAAGCTGTTGCTAGTAGTACTCTGGCGAATAATTTTGTTTATGTAATTATCTGTGTTTAGGGCTAAGCATAGTGGGGTATCTAATCCCAGTTTGGGTCTTAGCTATAGTGCGTCGGCTATTGTAGGGTCACTTTCGTCATTTATTTTTATTTTAATCATGGCTTTTTACAGCTTAGTTAGAATTTAACCCTATTTGGTATGGTGCTTTAACACGTTTTACGCCGTACTCCTGTTAGCTTGGGTTAATCGTATGACCGCGGTGGCTGGCACGAGATTTACCAACCCTAATTAATATAACTTAGTCAAACTTTCGTTTATGGCTTAATTTTTGTCACTGCTGTTTCCCGTGGGGTGTGGTTAAGCAAGGCGTCGTGAGCTACAGGGTGTGTGCTTGATGCCAGCTCCTCTTAGTTTTAATAACCTAGAGGGCATTCTCACTGGGGTGTAGATGCTTGCATGTGTAAGTTTATTAAGAGTTAACAGGAAGGCTGGGACCAAACCTATGTGTTTATGGAGTTGGGAGACTCATCTAGGCATTTTCAGTGCCTTGCTTTGGGTTAAGCTACATCAACGGGGGGGGGGGGCCTGCGTTTATATATTGACTTTGTTTGGAGTGCTAAATTGAGTATTGAAAGCGTGAAAAATTTAAATAAGTATCTAGGGAAAAGTCTGTTAAAAGTGGTGGTAGATATTTAAGGGGGAAATTTTTATGAAGGGGGGATATATAATATAATTTATGTCCTGTGACCATTGACTGTAATGTCCATGCTTATCATTATGCTGGTGCTCAAGATGCAGTTAAGTCCAGCTACAATAGATGCTCCGGGTCAGGGCCTTTGACGGCCATAGCTGAGTCCAAGCATCCCCCAAAATAAAAAAATACCAAATGTATGACAGCACAGTTATGTGTGAGCATGGGCTGATTAGCCATTAGT EMBV3_32018 GTGTATTGGTAGGGTTCTGTGCTCTTTCTACACCACATCTATCTTAGGCCCAGAGTTAGC Gene GeneID:510749|PANK3:NM_001075463:5_cdna Constitutive 0 NULL GeneID:510749 20 GENE PANK3 MGC142994 pantothenate kinase 3 EMBV3_39793 ACATCCCCTTGATCATCCAGTTCTTCGTGCTCCGGACGTATGGCGAGCAGCTCAAGAAGA Gene GeneID:280872|MX1:NM_173940:2_cdna Constitutive 0 NULL GeneID:280872 1 GENE MX1 MGC137984 Mx1-b Mx1B myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) EMBV3_17706 AATACAAAACCCACACCGACAGCATCAAGGCCTGGGAGGAGTTTCATGGCCTGGTGAACA Gene GeneID:519920|EIF4E2:NM_001075795:112_cdna Constitutive 1 NULL GeneID:519920 2 GENE EIF4E2 MGC152103 eukaryotic translation initiation factor 4E family member 2 EMBV3_00079 CTTTAGAGGTGGATGGTGCTCAAAAGAGGCCCCCGTCAGGGGTGTTTTAAATGGACTGAA Gene GeneID:511203|ANK3:NM_001105620:10_cdna UTR3_Alt 2 NULL GeneID:511203 28 GENE ANK3 MGC151492 ankyrin 3, node of Ranvier (ankyrin G) EMBV3_39623 CCTGTGCAACAGCTCTGAAACTGTTCTTGTGAGACAAGACAAATATGTCACTAAGGGAAA Gene GeneID:505423|LGR4:XM_002693488:123_cdna Constitutive 2 NULL GeneID:505423 15 GENE LGR4 NULL leucine-rich repeat-containing G protein-coupled receptor 4 EMBV3_39058 GGGGCACCCTGGACCTGTTCAGCGTTGATGGTGTCTGAGGTCTTGTCTGAAGAAAAGTCA Variant GeneID:514141|OGFOD1:NM_001166613:231_cdna 638^729 2 EMBV3_10615 GeneID:514141 18 GENE OGFOD1 NULL 2-oxoglutarate and iron-dependent oxygenase domain containing 1 EMBV3_22984 GCTCTGACGGCAACATTAAACCTCAGAATGGAAGAAATGGGGGGTCGCATTGAAGACCTG Gene GeneID:100335435|LOC100335435:XM_002697660:76_cdna Constitutive 0 NULL GeneID:100335435 24 GENE LOC100335435 NULL hypothetical protein LOC100335435 EMBV3_34274 GCGGACCCATAATAAACTTCCTCCTGCCAAGCCTCATTTGTGTTTCCTCCTGTGGCCTCA Gene BVT0102_004755 - 1 EMBV3_20302 GK000002.2:122154155-122169393 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34526 AGATCCTGGGGCCCCGGTTAGAGAAGGTGGTGGCCCCTCCCGCCTCCTTCCTCTGTCTGG Variant GeneID:281557|TXN2:NM_174208:161_cdna 377^654 5 EMBV3_40243 GeneID:281557 5 GENE TXN2 MGC137598 thioredoxin 2 EMBV3_07260 GAACTGGGTCATGAAGACCAACTGAAGAGCAACACTCCAGGATTCAAAGAGCTGATGATC Gene BVT0102_407288 + 0 NULL GK000003.2:18224800-18230310 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172285 TCONS_00172284 1 XLOC_104096 Coding TCONS_00172284 XLOC_104096 Coding Coding - 3:18227209-18228586 - TSS128370 1009 2 TCONS_00172284_1 106 2 0.268168604651163 0 0 0 0 0 0 0 0 0 2.85444206360016e-05 0 0 0 0 0 0.000811453642527536 0 0.000497340734262341 0 3.83955848560753e-05 0 0.000234479529899576 1.81840704970581e-05 0.000581528238598193 0 0 5.80660341044892e-06 0 4.8112845571217e-05 2.43157216226937e-10 XM_005197737.1 LOC101907731 PREDICTED: Bos taurus late cornified envelope protein 1F-like (LOC101907731), mRNA. 8e-47 192 77.08 0.23587710604559 NM_178438.4 LCE5A Homo sapiens late cornified envelope 5A (LCE5A), mRNA. 2e-104 383 72.85 0.628344895936571 TCONS_00172284_1 sp|O14633|LCE2B_HUMAN LCE2B_HUMAN Late cornified envelope protein 2B; 5e-09 51.2 55.00 0.669811320754717 1 noncoding 0 0 0 0 -0.187207055501594 0.212262866417071 -0.0375241892540578 0.554097667917066 CTCAGTCCACCTGCCTCCAGGGTAATCTGCTCCAGTGTTGAACCAGCTCCATTCAGTTTCTGCCAAGATGTCCTGCCAGCAAAACCAGCAGCAGTGCCAGCCCCCACCCAAGTGTCCCCCTAAATGCCCACCCAAGTGTACTCCTAAGTGTCCTCCCAAGTGCCCAGCCCCATGTCCCCCTCCAGCGTCTTCCTGCTGTGCCCCCAGCTCTGAGGGCTGCTGCAGCTCTGGGGGTGGAGGCTGCTGCCTGAGCCACCACAAGCTTCGCAGATCTCTTCGACGCCGACACCAGAGCTCTGGCTGCTGTGGCAGTGGCGGTGGCCAGCACTCTAGGGACTCTGGCTGCTGCTCTGGGGGCTCCAGCTGCTGCTCTGGGGGCTGCTGCTGAACTGGGTCATGAAGACCAACTGAAGAGCAACACTCCAGGATTCAAAGAGCTGATGATCTGCCCAGCCTGAGTCTTCTCTTTTTCTGGCTTGGAAGATTGGAAGAAGAGAACGGAAGGGCTTCCGAAACACTCAGAACGTCCCTCTTCTTCCTGCCACGTTCTTCCCATGGTGAGGTCTAGAGGTTTAACCTCTGATACTCACTGGCCTGATTTCCCACTAGATATAGTTCTTTGGAGGACTCAGTATTGGAATTTGGGTTATCACTGTAACCATAAAGCTTTTTATTCGTGGTGTCACTGCCTCTTGATTGTTTCGTTCACCTCTCCCACTCCCCACCCACTGCCTCAAGCCATCTTCCCTCCCTTTCTTCTAAATACAAGTCAACACTTAAAAAATCAGTTTGGGAAACAGATTTTGCACCAAAACTACTCAGACCTCTGGGAAACAATATTTCCTTTTATGATCTGAAGGAGGGGACTTTAAGCTTGAAGGAAAAAATCATGTTGGAGACCATTACTCTGACATAAGCTTCCCATGAGAAGGGTTGGGAACATGCTTTTCCAAAAGGAGTTGGTGGGTCCCAGAAAGGTCACAGTGAGATGACTCTGAGAGGGTTTCCT TCONS_00172283 s 5' 2411 TCONS_00172283 s 5' 3373 EMBV3_23700 AGGTGTACAGAACCCCAAGTCCCTGGACAACCTGTGAAATGCTAGCTGCCTGTGAACAGA Gene BVV0101_064233 + 0 NULL GK000019.2:40199719-40226035 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096848 TCONS_00096849 1 XLOC_058072 NonCoding TCONS_00096849 XLOC_058072 NonCoding NonCoding - 19:40208249-40209614 - TSS71879 1197 3 TCONS_00096849_3 67 0.184628237259816 2 0.123900293255132 7.79753648062245e-08 0.000225804978554533 0.000197364046741856 0.000117798817245066 0.000494951774373584 1.83190173000257e-08 0.000450652482465775 3.28547672262303e-08 0.000124946976049738 1.69687855629897e-08 0 0 0 0 2.12987800759525e-08 0 0 0 3.79734688528413e-08 0.000726848192476849 2.12830717471519e-10 0 0 0 3.80908977353892e-08 8.82837975043912e-05 0.00171808697678026 0 0 0 0 noncoding 0 0 0 0 -0.126627142763692 0.517640556090062 0.0172687620011971 0.781775079618805 AACTCCCTGCTCCACTGACAGGTTCTCACTGGGTGAGGGCTGAATGCTGGGTCTTTAGAAAAGACACCAGAAAAGCACAGGCTCCTCTACAAAATGGATGGGGCTGCCTTGCCAGCCGGAGCCTGAAAATGTGCCCAGGTGTACAGAACCCCAAGTCCCTGGACAACCTGTGAAATGCTAGCTGCCTGTGAACAGATGAAAGGGAGGACAGGCAACTGTCCTGGAAAGAAGGATCTGCAGACGGGACCTCCCTCAACTTTGACCATGTACATCTCAGGGTCTGCTTTCCCGGTCTGACCCCTCCCAGTGACAGCAGAGCTGTGAACCCAGGAACACTGACAGCCAAGAAAAGTGGCATCATCAAACCCCTCCCACCGCCTCTTCTCTCCTCTCATGGCCATTTTCAACATCAAAGAATAATAAACTACTACACTGCACATCTGAAACTCACATAATATTTCAAATCAACTATGCTTCAGTTTTGAAAAATTTATAAAGAATAAAAATGCTGTAAAAGAAATGCCCCCCAGGAGTTTTAGTAAAGGGTCTGAAACCTATAATTTGATCCCCAGTTCCATTCCATCTGCCAAAGCTGTGACGGACCCTGCGGTCAAGACAGTGGGCCAGCCATCTGCTTGCAACCATACCATGATTACAGGTTGTTCCTAAGAGTTGGTATAACTAGAGGGTTAGGCTCAAGGAGACTCACAGTAGCATTACTGATTGCCAACCATGTTCTAGGCTTTGCCCTAAGGGCTTTATGTACTTGCAACAAATTTGTGAGCCTGGAATTATTCTTACAAATGTTTTAGGAATTGGAGACTGGACTCAGAAGCATTAAATGCAAGATTGCCCAGCCAAAAAAATAGCAGGAAGGGATTTGAACCTAGATCTGTCTTGGGCTAAAAATCTGTGCTTTAAAAAAATAAATAAAATTAAACAAAACATAACAAAACAAAACGTTTATTATGGAAAATTTCTAACATACATAAAACCACCGCAAACTAGTAACGTGAACTGCCATATACCCCTCACCAAGTTATAATGACCATTAACACAGGGCCATCTTGTGGCAACTCTACGTTGACCCGTGCTCCTTTATTGGGTTATTTTGAAGCAAACTTAAGTTGTACCATTTTATCTGTAAATAGTTCAGCCTGTGTCTCTACTGGAGAGGGATGCTTAAAATCTGTGCTC TCONS_00096847 s 5' 8532 TCONS_00096847 s 5' 9653 EMBV3_19486 CTGAACTGATCTGCGGAGTCGCGAAGGGCCTACCTTGACCGAGAGACGTAACATTAGATA Gene GeneID:615529|C15H11orf71:NM_001078051:128_cdna Constitutive 0 NULL GeneID:615529 15 GENE C15H11orf71 C11orf71 chromosome 11 open reading frame 71 ortholog EMBV3_37417 CGAAAGAAGACCCTTTGTCCACAGAAATACAGAGGCAGTGTGGAGGCACGGAATATGACC Gene GeneID:100336686|LOC100336686:XM_002699682:5_cdna Constitutive 0 NULL GeneID:100336686 X GENE LOC100336686 NULL hypothetical protein LOC100336686 EMBV3_08149 GGTACAACCTCATTGTCGTGGGCCGATACCCAGATCCTAATTTCAAAAGTTGTTCCCCCC Gene GeneID:519357|DDB2:NM_001075788:72_cdna Constitutive 0 NULL GeneID:519357 15 GENE DDB2 MGC142936 damage-specific DNA binding protein 2, 48kDa EMBV3_41260 GTGCCTGATGAACTATGGACGCGGGTTCCTGATATTGTATAGGAGACAGGGATCAAGACC Gene BVV0101_005271 + 0 NULL GK000001.2:104147389-104259253 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078985 TCONS_00022660 TCONS_00076629 TCONS_00116551 4 XLOC_047870 XLOC_013330 XLOC_046881 XLOC_070718 NonCoding TCONS_00076629 XLOC_046881 NonCoding NonCoding - 17:9311890-9427538 - TSS57494 2548 2 TCONS_00076629_4 90 0.496860282574568 4 0.978002023398791 0.000248297150855918 0.000346018179878913 0.000155917596926066 0.000103106295891128 0.000205429801645925 0.000188765259998551 0.000126872431959786 9.65028619411522e-05 0.000137781428543591 0 0 0 1.85916209410861e-05 5.37560893594757e-05 0 0.000152374844049847 0.000477827440420587 9.84729787725142e-06 0.000188685635615669 0.000716329528343095 3.16214887627963e-05 4.16049719766277e-07 4.80065290900205e-06 1.97385728877364e-05 0.000100311479063658 0.000109963090378377 5.75322520873184e-05 0 3.2071884421401e-05 5.42706724188222e-05 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 0.0 1173 94.24 0.298665620094192 0 noncoding GTTCAATATATATCTATCTGACTTTCAGTTCAGTATATATTTGCATTATAGCTCCATTACGGGCTTCAGGAGTGGCTCAGTGGTAAAAGAATCCACCTGCAATGCAGGCAGGCGACAGAGAGGAGACCAGGACTAGATCCTTGGGTGGTGACTATCTCTTGGAGAAGGAAACAGCAACCCAATCCCAGTATTCTTGCCCAGAGAATTCCATGGACAGAGGAACCTGACGGGCTATATATAGTCTATGGGGTGGTAAAAGAGACAGCACTTAGGGACTAAAGAACAACAATAACAAGTTTATTGCTCAAGAAGTTCCATTCAGCAGAAGAAAAATACGGAAGAATTAAATCTATGAGTTTTGCCTTTCACCATGTGACTGCTACTCTTCACCGGAAAAAAGTCAGCTGTTCCAAGAGAGTCACTTCACACCTGCACTGGGCCTCCCGGAAGGTGAAAGCGAAGTGGAGGCAGCCAATCAGCGGCCAAAGAGGGCGAGCTCCAGCTCCGCCACAGCCACTCGAGCAGGCGCAGAACTTGGGGTGAGCAGGCTGCAAGTCCTGCCTGGCTGGAGAGCCATCATATCCGCACAGCCATCCAGACCAGAGGCATCGTCCAGCCTGTAAGGGCGCAGGGCCCTGAAGCTCAGCCTTGTGTCAGCCTCCCGAGGCTCTCCTCCTGCCCTGGTGCTCTCCGACCATCCGTCCAACCTGTTTCTGACCCATGTGACCCAAGGGCCCACAGGAGGAAGGTTTTGCTGGAGGTTGAAAAGGGATTCAGTCCTTCCTGAGTGCTGAGGAAGACCAAAGAGCACGAGCTGTCAAATGGGATATCGTGCCAGCAGAATTCTCATTGAACACTTGATGTCATATGTCATCTGACACTGGCTTTTCATTCAGGTCATTTCAGGATAAGGAAGAATACAGAGTTGGATCAAAAAGATAATTGGACCAGTGTTCTTGAATGTGGTTTAGATGGTATGTAGAAGAAGCCTTCATGTAGACTTGAAGCTAATGACCTAGTAAGTTTGAACATCTGGAAGTTCACGGTTCACGTATTGCTGAAGCAGGCAGGAATCCCTTAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCCGAAATGCAGTACTTGGATGCAATCTCAAAATGACAGAATGATCTCTGTCTGTTTCCAAGGCAAACCATTCAATAACACAGTAATCCACCTCTAGCCCCAACCAGTAACACTGAGGAAGCTGAAGTTGAATGGTTCTATGAAGACCTACAAGACCTTTTAGAACTAACACCCAAAAAAGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAATATGGAATGAAGCAGGGTAAAGATTAATAGAGTTTTGCCAAGAAAATGCATTGGTCATAGAAAACACCCTCTTCCAACAACACAGGAGAGGACTCTACACATGGACATCACCAGATGGTCAACACCGAAATCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAACAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTGAAGAAAGTAGGGAAAACCACTGGACCATTCAGGTATGACGTAAATCAAATTCCTTATGATTATACAGCGGAAGTGAGAAATAGATTTAAGGGCCTAGATCTGATAGATAGAGTGCCTGATGAACTATGGACGGAGGTTCGTGACATTGTACAGGAGACAGGGATCAAGACCATCCCCATGGAAAAGAAAAAGGAGCTAGGGGTGCAGTATTCACTTAATGATGGGTGTATGAAAATGGCAGCATCCTAGGGAGGGAGTGCCATGGTGTACATATTTTTAAATGAGGATATTAAAGGTTTTTTCTTGACATACTCAAGACAACATATATAGAGAAGAGTTATAACAGTTGCAATTGGGTAAAAAGATAGAACTGGTCTGTTGGAGTATTGTTTTCACATATTTTGGTATTTTTCCCTGAGAGGGCTCAAATAAATGATCAATTAAATATATGTCAAATCTCGCTTTTGAAAAAGCTGTGCATATTTTTATTTATCAGATGGTAATTTTCAAAGATTTTTTTTTTTTTTTAATGTGCTTGAAAGTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTTGGACTCTTTGTGACCCCATGGACTGTAGCCTACCAGGTTCCACCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCTTCTCCAGGAGATCTTCCTGACCCAGGGATTGAACCCGGGTCTCCCACATGGTAGGCATTGTAGGCAGACGCTTTACCGTCTGAGCCACCAGGGAAGATCTTATGTGCTTACTCTTCTCTGAAAACTCTACTTTATCTTCTTTCTTCCTTTCCTAGTATCCCAACTCTGCCATTGGCCTTATTTTCTCAGTCTTCAGTCATTTCAGTTGTTTGTGGTGCACAGAACACCGTGTTGCCCCCCGACCCC TCONS_00074796 TCONS_00074797 r 5' 422076 TCONS_00074796 TCONS_00074797 r 5' 307953 EMBV3_10334 GACCTGGGGGCCCAGATCAGCTGGGTGACGTCGGCACACGGTGGTGCACCTCGCCTGCAT Variant GeneID:614105|TECR:NM_001034748:40_cdna 357^454 1 EMBV3_26827 GeneID:614105 7 GENE TECR GPSN2 MGC127748 trans-2,3-enoyl-CoA reductase EMBV3_10530 GACAAAGAGCAAAGGAGATCACTGAACAAGTGTGGCATAAGACCAAGGTTCCCATGCAGG Gene GeneID:786194|LOC786194:XM_002697395:62_cdna Constitutive 0 NULL GeneID:786194 23 GENE LOC786194 NULL similar to LOC512938 protein EMBV3_15082 GCAGCTACCAGAAGCCCATGGAGACGGACCTGGTGTACATCGAGAAGTCCCCCAACTACT Gene GeneID:100337066|LOC100337066:XM_002687981:33_cdna Constitutive 0 NULL GeneID:100337066 5 GENE LOC100337066 NULL wingless-type MMTV integration site family, member 7B-like EMBV3_22193 TAGTCTCTGGAGATGTGAACAAAGTAGGGCAGGGAGGGCAGGAGTGTTTGCTGGAAGAGA Gene GeneID:280836|LEP:NM_173928:134_cdna UTR3_Alt 1 NULL GeneID:280836 4 GENE LEP NULL leptin EMBV3_00289 AAACGCAGCACCTGGAGAACAGCCTGAGTGCAGAGACAAGAATCAAGCTGGACCTGTTTT Gene GeneID:540726|TMEM57:NM_001038647:257_cdna UTR3_Alt 2 NULL GeneID:540726 2 GENE TMEM57 NULL transmembrane protein 57 EMBV3_11590 AGGGAGAACACGGTAAGAAGTGGTGCTCACTTTCTCCATCCCCCCGACATGATTCTGCTA Gene GeneID:538816|ZCCHC17:NM_001034652:151_cdna Constitutive 0 NULL GeneID:538816 2 GENE ZCCHC17 MGC127582 zinc finger, CCHC domain containing 17 EMBV3_14298 CTCCTAGTTACCAGTCACAAACTAGCTCAGTGGTGTCAGACGTTTGCTGTGACCTAACAG Gene GeneID:532822|QRSL1:NM_001046336:3_cdna UTR3_Alt 2 NULL GeneID:532822 9 GENE QRSL1 MGC137680 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 EMBV3_31222 TATCTGGGTGAAGACAAATCAACTGCAGCGCATCATTCGAACAGGCCGTACAGGTCACTG Gene GeneID:540339|METTL3:NM_001102238:88_cdna Constitutive 0 NULL GeneID:540339 10 GENE METTL3 MGC165887 methyltransferase like 3 EMBV3_24341 GAAGTTCCATCTTCTTCCTCATGCCCACTGCCTGACCAGAGCCGCTTTGCACCCAAGAAG Gene GeneID:511125|RNF135:NM_001098936:241_cdna UTR3_Alt 2 NULL GeneID:511125 19 GENE RNF135 MGC159982 ring finger protein 135 EMBV3_35345 GGCTGCCCCTGAGGAAATAGCCAAGCACCAGGATGAGAACTCCAAAAAAGAGGTCCAAGA Gene GeneID:617503|LOC617503:XM_002699476:64_cdna Constitutive 0 NULL GeneID:617503 X GENE LOC617503 NULL hypothetical LOC617503 EMBV3_27023 TGTGGTTGATCTACATGACAAACCCCACTTCCTGTCTTGGGGAAGAGTCACAAGGAACCC Gene GeneID:528607|LOC528607:XM_002690584:22_cdna Constitutive 0 NULL GeneID:528607 10 GENE LOC528607 NULL similar to TRD@ protein EMBV3_23544 CTCCTGCCCCAACCTCTATGCCAACTGGGTGGTCATTCTCCTGCTGGTCACCTTCCTGCT Gene GeneID:100299596|LOC100299596:XM_002699446:159_cdna Constitutive 0 NULL GeneID:100299596 29 GENE LOC100299596 NULL hypothetical LOC100299596 EMBV3_35747 TCTCTAGTTGAGGTGCACAGGCTTCTCATTGCGGTGGCTTCTCAGTTTCCGCAGGTCCCA Gene BVV0102_150653 + 0 NULL GK000002.2:122915678-122974405 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30031 AATGTAGAACCATGGGACAGTCAATTCTATCATCCTTTCTGGCTCTCTTTGTTTTGCCCC Gene GeneID:534524|DMXL1:XM_002688999:23_cdna UTR3_Alt 2 NULL GeneID:534524 7 GENE DMXL1 NULL Dmx-like 1 EMBV3_01858 GCTCCTCTCGGCAGCTCCCCAGTAACCTGCGTATTCTACAGAATCCTATCTCATCTGGTT Gene GeneID:515639|RASSF8:NM_001024549:28_cdna Constitutive 0 NULL GeneID:515639 5 GENE RASSF8 C12orf2 MGC134553 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 EMBV3_31261 TCTTGACTAGATGGGCTGTAAACCTAGGAGCTGAGAGGGCTGGAGGCACTCTTAACGATT Gene BVV0102_123624 + 0 NULL GK000017.2:54539608-54556010 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075446 TCONS_00075450 TCONS_00075447 TCONS_00075445 TCONS_00075448 TCONS_00075449 1 XLOC_046590 Coding TCONS_00075446 XLOC_046590 Coding Coding SBNO1 17:54487179-54544265 j TSS56892 10618 1 TCONS_00075446_4 1392 32 0.814557239204695 0.00125399146289463 0.000725852437585025 0.000850335096826145 0.000900764809995339 0.000839155963301597 0.00025867165243874 0.000667814692509666 0.000593996757840601 0.000933736333034762 0.00052409601725565 5.78884068486244e-05 0.000219387814336587 0.000453049133718363 0.000403292945735275 0.000507039545314259 0.00199067466506552 0.000131553453364883 0.00200045481521759 0.000591114766635276 0.000562148998619056 0.000230454868959082 0.000699680765556941 0.00019492452229261 0.00134337274695396 0.0026570930086 0.000275967804280792 0.000382047865764448 0.000434846228194035 0.000184416330596399 9.03759841697268e-05 XM_005195024.1 SBNO1 PREDICTED: Bos taurus strawberry notch homolog 1 (Drosophila) (SBNO1), transcript variant X3, mRNA. 0.0 1.915e+04 100.00 0.999811640610284 XM_005253575.1 SBNO1 PREDICTED: Homo sapiens strawberry notch homolog 1 (Drosophila) (SBNO1), transcript variant X4, mRNA. 0.0 8666 87.99 0.646166886419288 TCONS_00075446_4 sp|A3KN83|SBNO1_HUMAN SBNO1_HUMAN Protein strawberry notch homolog 1; 0.0 2720 98.06 0.998563218390805 3 coding 0 0 0 0 -0.0255220457834501 0.834591818529229 0.00416376045734687 0.952218823917406 TTGGGGGAGGGGCGTCAAGATGGCGGCGGGGAGGTAGGCAGAGCCGGACGCCGCTGCTGCCGCCGCCACCGCCGCCTCCGCTCCCGTCGCCTCTGGTTCTTCAAGCTGTCGTCACCTGAGAGAATCTGTTCCGGTGTCGGATCCGGCGGGGAAAATGGTGGAACCAGGGCAAGATTTACTGCTTGCTGCTTTGAGCGAGAGTGGAATTAGTCCAAATGACCTCTTTGATATTGATGGTGGAGATGCGGGGCTTGCAACTCCAACACCTACCCCTCCCATACAGCAGTCAGTGCCACTTAGTGCATTAGAACTAGGTTTGGAGACTGAAGCAGCAGTTCCTGTTAAACAAGAACCAGAGACGGTACCTACTCCAGCACTTTTAAATGTTAGGCAGCCTCCATCTACTACAACATTTGTGCTGAATCAAATAAATCAGCTTCCAACCTTGGGATCTACAATTGTAATGACTAAGACACCACCTGTAACCACGAATAGGCAAACCATCACTTTAACGAAGTTCATTCAGACTACTGCAAACACACGCCCTTCAGTCTCAGCACCAGCAGTACGAAATGCCATGACTTCCGCACCTTCAAAAGACCAAGTTCAACTGAAGGACCTGCTAAAAAATAATAGTCTGAATGAACTCATGAAACTGAAGCCACCTGCTAATATTGCTCAGCCAGTTGCAACAGCAGCTACTGATGTAAGCAATGGCACAGTAAAGAAAGAGTCTTCTAATAAAGAAGTAGCAAGAATATGGATAAATGACATGAAAATGAGGAGTTTTTCCCCAACCATGAAGGTCCCTGTTGTGAAAGAGGAAGATGAACCAGAAGAAGAAGACGAAGAAGAAATGGGTCATGCGGAAACCTATGCAGAGTATATGCCAATAAAATTAAAAATTGGCCTACGTCACCCAGATGCCGTAGTTGAGACTAGTTCTTTATCCAGTGTTACTCCTCCTGATGTTTGGTACAAGACATCTATTTCTGAAGAAACCATTGATAATGGCTGGTTATCAGCATTACAGCTTGAAGCAATTACTTATGCAGCCCAGCAACATGAAACGTTCCTACCTAATGGAGATCGTGCTGGCTTCTTAATAGGCGATGGTGCTGGTGTAGGAAAAGGAAGGACAATAGCAGGAATCATCTATGAAAATTATTTGTTGAGTAGAAAAAGGGCTTTGTGGTTCAGTGTTTCAAATGATTTAAAGTATGATGCTGAAAGAGATTTGAGGGATATTGGAGCAAAAAACATTTTGGTCCATTCATTGAATAAGTTTAAATATGGAAAAATTTCTTCCAAACATAATGGGAGTGTGAAGAAGGGTGTTATTTTTGCTACCTATTCTTCCCTTATTGGTGAAAGTCAGTCTGGTGGTAAATATAAAACGAGGTTAAAACAACTTCTACATTGGTGCGGTGATGACTTCGATGGAGTGATAGTTTTTGATGAATGTCATAAAGCAAAAAACTTATGTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAGTTTTAGAACTTCAGAACAAATTGCCAAAAGCTAGAGTTGTCTATGCTAGTGCCACTGGTGCTTCTGAACCACGAAATATGGCCTATATGAACCGTCTTGGAATATGGGGTGAGGGAACTCCATTTAGAGAATTCAGTGACTTTATTCAGGCAGTAGAACGGAGAGGTGTTGGTGCCATGGAAATAGTTGCTATGGATATGAAGCTTAGAGGAATGTACATTGCTCGACAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCTTCTTTCTCAGAGCTATGTTAAAATGTATAACAAAGCAGTCAAACTGTGGGTCATTGCTCGAGAGCGGTTTCAGCAAGCTGCAGATCTGATTGATGCTGAGCAGAGAATGAAGAAATCCATGTGGGGTCAGTTCTGGTCTGCTCACCAGAGATTTTTCAAATACTTGTGCATAGCGTCCAAAGTTAAAAGAGTTGTGCAACTAGCTCGAGAAGAAATCAAGAATGGAAAATGTGTTGTAATTGGTCTGCAGTCTACGGGAGAAGCTAGAACATTAGAAGCCTTGGAAGAGGGCGGGGGAGAATTGAATGATTTTGTTTCAACTGCCAAAGGAGTGTTACAGTCACTCATTGAAAAACACTTCCCTGCTCCGGATAGAAAAAAGCTTTATAGTTTGCTGGGAATTGATTTGACAGCTCCAAGTAACAGCAGTTCACCAAGAGATAGTCCTTGTAAGGAAAATAAAACAAAGAAGCGGAAAGGTGAAGAAATAACTCGAGAAGCCAAAAAAGCACGAAAAATAGGTGGCCTTACTGGTAGCAGTTCTGATGATAGTGGAAGTGAATCTGATGCCTCTGATAATGAAGAAAGTGACTATGAGAGCTCTAAAAACATGAGTTCTGGAGATGATGATGATTTCAACCCATTCAGAGATGAGTCTAGTGAGGATGATGAAGATGATCCCTGGTTAATCAGAAAAGATCATAAGAAAAACAAAGATAAAAAAAAAAGGAAAAGTATAGATCCAGATTCTATTCAAAGTGCCTTATTAGCGTCAGGTCTTGGATCAAAACGACCTAGTTTTTCTTCTACACCAGTTATTTCACCTGCTCCTAACAGTGCACCAGCTAACAGTAACACCAACAGCAACAGTAGCCTTATAACAAGTCAAGATGCCGTGGAAAGGGCCCAACAGATGAAGAAAGACCTACTTGATAAACTAGAAAAATTAGCTGAAGACCTCCCTCCTAATACCCTGGATGAACTTATTGATGAACTTGGTGGCCCTGAAAATGTTGCTGAGATGACTGGCCGCAAGGGGAGGGTCGTAAGCAATGATGACGGAAGCATATCTTATGAGTCAAGATCTGAACTTGATGTTCCTGTGGAAATACTAAATATTACAGAAAAACAAAGATTTATGGATGGAGATAAGAATATTGCTATCATCTCAGAAGCTGCCAGCTCAGGTATTTCATTACAAGCGGATAGAAGGGCTAAAAATCAAAGGCGAAGAGTTCATATGACTCTGGAGTTACCATGGAGTGCTGATAGAGCAATTCAGCAATTTGGACGAACTCATAGATCAAATCAAGTTACCGCTCCTGAATATGTCTTTCTGATTTCTGAATTGGCAGGAGAACAAAGATTTGCATCTATTGTTGCTAAAAGACTTGAGAGTTTGGGCGCACTTACACATGGAGACAGAAGAGCAACAGAATCTAGAGATCTGAGCCGGTTCAACTTCGATAATAAGTATGGAAGAAATGCTTTAGAAATTGTCATGAAATCCATTGTAAACCTAGATTCTCCTATGGTATCACCACCTCCAGACTATCCTGGAGAATTCTTTAAAGATGTTCGACAAGGACTGATAGGAGTTGGTCTAATAAATGTAGAAGATCGTTCAGGAATTCTTACTCTAGATAAAGATTATAACAACATAGGAAAATTCTTAAACAGAATTTTGGGCATGGAAGTGCATCAACAGAATGCACTATTTCAGTATTTCGCAGACACACTTACTGCAGTCGTTCAAAATGCCAAAAAAAATGGAAGATACGATATGGGAATCTTAGATCTTGGTTCTGGGGATGAAAAAGTGAGGAAAAGTGATGTTAAGAAGTTTCTGACTCCAGGATATTCAACATCTGGCCATGTAGAATTATACACAATAAGTGTGGAGAGGGGAATGTCCTGGGAGGAAGCTACCAAGATTTGGGCTGAGCTGACAGGACCAGATGATGGCTTTTATTTGTCATTGCAAATAAGAAACAACAAGAAAACTGCCATCTTAGTTAAAGAAGTAAACCCTAAAAAGAAGCTTTTCTTAGTTTATAGACCAAATACCGGGAAACAACTCAAATTAGAAATTTATGCTGATCTAAAAAAGAAATATAAGAAGGTAGTCTCAGACGATGCCGTGGTCCACTGGTTAGATCAGTATAATTCATCTGCAGATACTTGTACTCATGCTTATTGGCGTGGCAACTGCAAAAAAGCAAGCTTGGGATTAGTTTGTGAAATAGGTCTTCGTTGTCGCACATACTATGTATTATGTGGCTCAGTACTGAGTGTCTGGACAAAAGTTGAGGGTGTTCTTGCGTCTGTCAGTGGCACAAATGTGAAAATGCAGATAGTTCGCCTAAGAACAGAGGATGGACAGCGGATTGTAGGTTTGATCATTCCTGCAAATTGTGTGTCTCCTCTTATAAATCTCCTTTCAACTTCAGACCAGTCTCAACAGCTTGCAGTCCAGCAGAAACAGCTCTGGCAGCAGCGTCACCCCCAGAGCATTGCCAGCTTGAGCAGCACATAAGAACAGACAGGTTTCAACATGGATGTATCTGAAATGCTGTTGAAGCATATCATTTGCATAAAAATCAGGGACAGTTTCCAAAGAATTATAATTTTTTTTTCAGTTGTGCTCTCTCTAGTTAATTTTCTTGGGAATAAGGACAAACCTGGAATAGATAGCAAAACTGAAAATCAGCAGTGCCGACTGGTACATCTGTCTTTCCTTGTGCTTTTCCCATGGTACTTACCGTATGCTTTTACTTTGGGTGAGCAGAGGGGTATGTGTGTGTATGTGTCAGTCTGTTTGTTTGTTTGTGAGTTTGTTAAAAGCTGCGAACCATAATTGGTTTAAAAATGCTTGGAACTTCCCAAACTGGCTTTACTTTTATGTTATACAGTGCTCAGGGTTAACGCAGTACATCCATGCCATTGCTGTGGGACTTATCCCCAGATGCATGTGTTTTGAGTCTATAAATAGAGAAAATATATATTGGTTTCTTTTCCCAACTTATTAAAACAATAGGTTTATTAAGGCATGAAATGAAAGGTTGCATATCATGCATTCAGGTTCTTTTCTAGTTTTTGTTCTGACAGTGCATGTCTTTGAAAGCATGCGTAAACAAGATTAACACAGAAGTCAAGTAACAGAGCGAAACATTTGTAGATGTACAGCATTGGTTATTGCATTTTTATAGTGTTTATACCTGGGTATTGCTTCAAACCCTGCAAAATCTCCTCCTCCCATTCTTCCTGCCCCAGGTTTCTTGTCAAGGTAATGAGTACACACATTTTTTTGGTGATAAAACTCTTAAAAGTTAATTTTAATGTATTAATAGCATTCCTAACGTGTGCTGCAAAAAAGGCTACAAGCCTGTTTTTTCTTAAAATTACATCTTTCTTAACTTAAAGATAGTTGTAGAAAGGAGTACGGATTGGCTTCTGTCTTGCAAGCAATCTTTTTTTTTTTAACTTCATTATCTTAATTTGCTTTGTCACTCTTAAAAATGAAAACTTTGTACTTGAGTTGTAAACTAGACAATGAGGAAACACTTGAGGCTTCTGCTGTATGTTTATTTCTTGTTGTTATTGTTGTTACCCAGTAACTTGAATATTGTTTAACGTGTTGTAAGACATTGTAGAGTTTATCTCAAGCTGTTAAAAATGGTAATGTACAAATGTGAATAGACACTTATCTATAATATGGGTAAGTTTTGTTTTGCCTATAATAGATGTTTATAAAAACAAGTGAGGGGACAATTGGTCTTTTTGTTTCCTTTTTTTTTCCCCTTTACTTTTTTTGCTTGCACAGGTTGCACTATTAAGAAACTGAGATTGTATAAACCTGGTCAAAAGCTGCAAGATACCACAGTCTTGTAGATGTCAAATAAAAAGTTATTATACTAACCCGAAGTGGACTCTTGTTTAGGCCCTCACCACCTGCAGAAGTAGCCTGTGATGGAAACGCTGCAGAGCTCGGCGTGTTGCTCAACATTCCAGGTAGCCTTAGATTTTGGCTTCAAACCCACCCCACAGAATCAGAGTGGTGTTGAGGAAGGGGTGAAATAATAGTGCTTTCAAATGTTTTGCAAGTTGAACCGTTTGCCTTCTTCTTGCAGGATCTGGTGAGATATGTGTTCAGTGATGGGTAAGCTAGCGCTGTCATCCTCTCGTGTTTTTACAAGCCTGAGTTTAGTTAGGTCACGTTCACCATAAGTTTTCTTTCTTTGGATGTATTTATTCTTGATGCCTAAAAGAACAAATTGAGAATAATTTCGGTTCTTTGGCATATTTTGCCCAGTGGATGCAACTTTTATCCTCAGTCTATCCTTATATCTCAGGCAGTGATCCATGTGAATATCAACCAGTGTCCCTTGTTAGGGCCACTAGACCAGCTGGCAGCCAAGAGCAGAGTTGTCCACCTGCACCAAAACTTCCCACTTAGTTCTGTTTTTAAATCAGGAGCCTAGTCTGCTTCCATCAGCACCCCAAGGGAGATAGAGCTGTGGAGAGGAAGCCTAACCAGCCTGTTGCCTCCAGTGAGACCGAATGGCAGGGTTGTGGAAGAGAGACTCTCATAGGCTTGGCCCAACTTTGCTTTTTTTGTGTGTGCGGGCATCTTTTTTTTTTTAAGCAGGTTATGGTTTTTTCCAAGCAGCTTCAGTATGAGGATTCTTTAACATGAAATTAGTTGACCCTCACAATTCACGATGTAATGTTTGCTCTTGGAATAGCTATCTTATTACAGAGGGGGATGTGTATGTCCTGTTCTTTGTAGAACAGCTTTGTTTTGCATTTTTAAAAAAGGTCCAGAAATAAGTCCTATGAAAACTCTGAGAGTAGACCTCGGAAAGGCAGCCGTGTAAACGGATGGGGCGCTGAGGTGCCGGCTGCCCACGCTCATGGTGGTGGGGTGTCACGTGAGCCCTCGGAGCCTCTGCCCATGCTCCTCTCTGGAGGTGAACATACGACCTTTACACTGTGCCCTTATCCAAGTCAGCAAGTTTTAGGTTGGTCAACATGGGAAACCCAGCATTCAACGTCCTACTCTGTCAAAAAAAAAATCAAGTCTCAAACGAGAGCTAACTTCTGTAAAACAGGTCTTGTATTTCAGGATCTGAATGCCATGTCTGAACCCAAGGACCTTGTTGAACCGTATGTGAGTCCATTTGGCCTCTAATGCCTTTTCTCCCTTTTTAGCAATATGGCTCTGAGCACAAAGATCTGGTTATGAATCATGTTCGTGTTTTCAGAGTTTACAGTACCGATTGTGCTGAAAACCACTTTCCCAGTCCAGAGCTGCTCAGATGGTATTGGGGGAGGTTAGTGTTCCCCTGATCTAGCATCCTCCATACCACAAGGTCTCTAGCTGCAGTTTAGTGGGATTATCCAGATATGTATCAATGATACAAATTCCTAAAAGTATTAATAAGGTATTTTTAAACACAACTTGATGAAAAAGTAACTATCTTAAGCAATTTTCCCTTTCTGCTGCTAAATTGCCGATAAAACTCTTCAGTATCTTTTCTTCACATCTGTATATAAGTTAGCAAGAACCTGCATCCAAAGCATTGTAGGAGTGTGTGTATGTATATATATTTATTCCAATCCAGTTAGCACTTCAGAAACCTTTTTGAGTTGCAACAGTAAAACCTTTTAGTTTTATCTTGCTTCATCTGTAAAGGTAAAAGTTCTAGATTATCAAACTCCAGGGAAATATTAGTATTTTGGAGGCATAATTTTCTGGCTGTACCCCCCGGGACATTCATTTGCTAATCTCCATGTGATGCTATCAGAACAACTTCTAACAGGGATGACAAGCAAGGGTACCAGGACAGCACTTAGAGTTGTATAATGGGACCCTTTCCCTCATTCCCCTCCACTTTCCAAGGAGGGGGAAGAAAGGCGATAGATTAGAAATGGTTGATGGATCTCAATTGATGAAAGTAAGAACAGAGGAAAAGTATTTTTCCCTTGGGTCCTTTTCTTGAAAAGATGTTAAGAGGAAAGTCCCTACCCAATTACTCTCTTAAAAAAAACGTACCTGAATGACATTCGACAGTTTCTACGAATGGTGTTACATAGAGTCTCTGTGAAACTGGTACCCAGCTAACAGACGTTTGGTGAATGCAGGCATCCCAGTGGTAGTGGCATTGGTTGACTATCCTTCCTATATCTGAGGTCTCCTTGGCTAACACCACACCCAGGTGCGTGCACTGTGCATGCCTTGCTCTGGAATATGCAGTAGGCAGTCCATGTTGTGGCTACAGCTGCGAGCAAAAACCATTTGTAAAAAGTCCTTGTTGGATACCAATTGTCTAATACGAGGCAGTGCGTTTTAAGGGCATATACGTGAAGGAAACACATTTAGATACCTGCAGCTCTAGCTAGCTAGTAATTTTTTTCTGAGTACTTGAGGTGAAATCCAAAACCCACCTTCTAATCTTACGCTGTACTTATATATATGTACATAATGTGTATATATAGATATGTTGAGTTCTTTTGAATTCTGAATGTAAATATTTCTTGTAAATTGGGACTCCACCCACTTGTTTGTCTCTTTTCCCTCCTCCAATTCTATTTATTCTTTTCTTGGTTTCCCATAGGGGGCTTCTTATAATATTTTTTTTTTCTTTTTTGCTCTAGAAACGTATGAAAAACTTTAGTTGAATTTGTCACGTATTTTAGAATTCAGCTTTGCATCTTTACTATAGAATTCCTGTGTCTGTTTCGTGTTAATATTTTTCAACATGCCTGATTTATGTTTTGCATTTTTATTACAAATTTTTTACTGTGTGCAATGCATTGTATTGGGGGAATGTACTTGAGTGCAATTTCTGATACTGTCATTATATGACTAGTTATGCTCATTTATGTTGCTCTTTGGAAGCTATAGTGAGCCTGTTTTCACCTGAAAAAATTTCTTCCCAAGACTTCCTTTAAGCTCCTCTAACTTCTTCAGTGCATTTGGGATTAACCTCAACTCTTCAGTAAACCTGACTTGTTTCTACCCTTGCAGTTTTTCAGGCCTGCACCACAAAATCTTGTAGATCTGAACAGTGATGTATGGGCTGCTGCTGCTGCAAATTTTCTGTTTGTTAAAGAAGTTGATCTGTCCTTTCAGCCTTCAAATAATAATCAAAAACTTACTTTCCAGTGAGCATGGGTGATCTGCTTCTGTCCCACCAGTTAAGGGGCGGAGACAGGCCCGGTACGTGCTGGTGTCCGTACTGGCAGGTTAGAGAACGTACTTCCAGGGACAGTTGTCCTCCTGAGTAGAGCAGCACAACTGCTCGTGCAGGCTCCCGTGAGCCTCTGGCTCAAGGGCCGATGCTGTGTGTTACCTGTGGAGGGGACAGGCTGGTGGGATCCCTTGAGCTGTCCCACCACCAGCGAGCTGTTGAGTTGATCTTGACTAGATGGGCTGTAAACCTAGGAGCTGAGAGGGCTGGAGGCACTCTTAACGATTGGATTAGTGTTGCCTGGAGGGCCCACCCAGGAGTGGCTCACAGACGTGGTGGGAATCATTGCCACCACTGTGGTAACAGGCAAACACTGTGTTTCTGTCTGCAGGTTTTGCACTTTTAAGAAAATATTCCTCCGTAACTTTCAGCAAAGACACCATGAGCATTTCTGGGGCGTTTCATTCATGTACACGTTTCATTCGTTGCTCTGAGCTTGGTAGACTTTTAGAGGTTGTCTGTATTTAGGTGAGTCTTAGGAACCTAGTGTGTCTTGAAAGAGGGCCTGTCAGAGGTGAGCTCCTCTGTCAGAGGCTTTCCTTCTCTGACTCCCAGGAAGCAGTTGAACCACACGGTTTGCAGCAGCAGCCGTCAGGCTGAGGCCACACCCTTGTAGTGCAGAGTCGAGCAAGGGGTGCCGCCTGGGACGTAGGCTGTCTTCCGTACTTGCAGGTCAGGCCTCCTTGGGGCTGAGGGTCAGTCCGCAGGCTCCTTAGTGAGAACTCCATGGCTTTTCCACCCATCCCCCTGTCCTGAGGGCCTTTCTTGCTATGACAGTATTTGTGGCACTGAAGAGGGTAAAGAAGCTTGAGCCTTCTTTCTGACTTCCACTTTGCGGGGCAGATAGCTTGTATTTTCTACGTAGCACATTGCAGTCTTGCTGCCATCAGAAAAAAAAAAAAATCATCCTGTTCATGGTTTATACTGAATTTGCAAACTACTGATATTATTTTTCAATAACCACTTGTATCTACCATCAACCATGAGAGGTGGGAAGAGGTACGCTGTATCTCTGCAATAAAACTTTTGCCAGGTTCTACCTCCCGCTGAGCAAAGGATACTTTTGTACTTAGGCATAGATCTTCCTCCTTTACTAATCTGACATGGTGCACCTTGAGACAACATGTGATGGAATCCAAAGACAATTTGAAACAAAGGTGGATGTAAAACTCCTTCAGTTGTTTCTGTTGTGTTCTTTTTTACAATCTCTCTTTTTATATTGCTACTCTGTTTTGAATGTCCGTCAGTGTATGAAGGGTACGCACTGTTCTGATGATACTGCACTGCTTCTTCAGCCTTCTGTGGTGATACAGAACCAAGTGTCCAGAAACAATTGTTCTAACCATTTTGATTTGTAACTTAAAAAATTGGCTCTCATGCAATAAAAAAATGTATTGGCTGCATTTAGCGAGGTTTATGCCCTTGCAAGTAAAAACGATCAACCATGAAGCGTAACAAAATTCTGTATTTAGTTTTTTGTTGTTGTGTTTTCTGATTTTTGTTTCTCTCTCTCTTTTTTTTTTTTTTTCTTTTTTTGTAAGATTCTTAAATAAATTAAACTGGCTAAT EMBV3_19374 TCCTTCAGAAAGCCGAGGAGGTGGTCCCCAATGCCGTGTACCAGTTCAGCCAGTATGTGT Gene GeneID:540962|LOC540962:XM_002688889:139_cdna Constitutive 0 NULL GeneID:540962 7 GENE LOC540962 NULL similar to QIL1 protein EMBV3_26738 TGCCCTTGAAGTGGTCTTTGTGGGTGTGAAACAAATGGTGAGAATTTGAATTGGTCCCTC Gene GeneID:286870|EIF4G2:NM_001099859:51_cdna Constitutive 1 NULL GeneID:286870 15 GENE EIF4G2 NULL eukaryotic translation initiation factor 4 gamma, 2 EMBV3_22882 CAGCAAGTATTCATGACTGATGTTAGTACCGTGGCTCTTGCATCCGCTGTGACGATGAGC Gene BVV0102_129786 + 0 NULL GK000001.2:10227340-10956300 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00006183 1 XLOC_001746 NonCoding TCONS_00006183 XLOC_001746 NonCoding NonCoding - 1:10234723-10235210 - TSS3260 487 1 TCONS_00006183_1 33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000640488285525464 3.44242611443639e-05 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0113946088753462 0.93034015486163 -0.0219079740344026 0.734207783086095 ATTCCTGTTTTTTGGAACCACACTTGGATGCCATAATCTTGTTTTATTTTCCTCATTCTTAGGAGATAACATGCCAAAACATTTAGAAGTGAGATGCTAGGTCTGCTTATAGGTACGGACATACAGAGAGAGGCGGAGAGGGACAGAGAAATAACGCAGACGTGGCAGATGCTAACCATGACTGAATCTCAGTGAAAGGTCTGCTGTTTTCAACCTGCCTGGGTTCCACCCCTGACCCCAGCAATGTGACTAGCTGTGTGCTACTTGGCAGTTGAATTGAGCTCTTTAAGTTTTAGCTGCTGTGTAGATGAAGTGACAAGATGAACGTGAAGCATTTGTCGGGTGCTAGGCTCATCGTCACAGCGGATGCAAGAGCCACGGTACTAACATCAGTCATGAATACTTGCTGAGTGCCCATAAGTCTCTGTACATTTATTACATGTTGCACTTGTTTTAAAAGTACAAGTCAAGATACATTTACTACTGT TCONS_00000207 . 3' 5871 TCONS_00000207 . 3' 6357 EMBV3_32003 AAAAAGAGAACTGTCGGTGTCAATCAGCTCTGCTCAGGACCCCCCAGACATGCTTTCTCC Gene BVT0102_155637 - 1 EMBV3_35975 GK000007.2:41975665-41989219 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13674 CTTCTCTGGTCTTTACTGAGATACTCCCTGTTGGTGGGGGAGGGAAACAAGTATACAGGG Gene BVV0102_174687 + 0 NULL GK000025.2:615348-618417 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145802 1 XLOC_088932 NonCoding TCONS_00145802 XLOC_088932 NonCoding NonCoding - 25:615692-617943 - TSS109173 2088 2 TCONS_00145802_11 121 0.136015325670498 2 0.0728888888888889 0.000762388873233789 1.44374055641674e-05 8.72741015202462e-05 5.94493906859591e-05 1.0307426774694e-11 1.71314942487166e-06 6.14451960930323e-05 2.12254470308245e-05 1.23898334863002e-11 1.97054441798916e-06 1.09635422254969e-06 0 6.87088878643641e-06 2.25287037501614e-06 4.46443321939854e-05 0.000126492151974114 0 0 0.00017474458332253 0.000420189536985765 6.0738615906599e-06 0 8.78741417306276e-06 0.00015337917791992 6.63646881198493e-06 1.01228005417705e-05 0.000370405882725953 4.60018302852784e-06 9.29998624683531e-06 0 XM_005255569.1 METRN PREDICTED: Homo sapiens meteorin, glial cell differentiation regulator (METRN), transcript variant X1, mRNA. 9e-18 96.9 71.96 0.078544061302682 0 noncoding 0 0 0 0 -0.0341431921397255 0.837045159478245 -0.0753729788142686 0.419369749259666 CAGATGGCTGTCTCAGCGCGACGGGAGGGGAGGCGAATACGAGGGGCTGGACCCTCTGGCAACTGGCCCAGCCATGGGGGTGGGAGGAAGAGCCCCAGGAACTGGGGAGACCACCTCCCTTCTCCAGGAAGCATCACACACACAAAGAAAGATGGAGCTCCCAGAAGTGCCCTGGCAGAACTTGGGAACGGGAGAGGGAACTGGCAGGACAGAGCCAGGACCCCCTCCTGAGGCCAGAAGGCCTTGAGTGGTAGAAACTTGTCTGCACACAGGCTCCTCCTCTATCCATGGCCCGTCAGTAGGCCCAGCGGGGACGGACGCTGCTTCAGGCAACGTGGACCTGCCGGATACCACTGTCCGCACCCCCCCCTCCCAAGTGCAGACTGCTTCACACTGGGGCCCCGCTGCCACCAGCGTGGAAGACAGTTCCTCAAATTATTCCTGGTGCCTGGCACAGCACCTGACACCTAGAAGAAACTCAATAAAAGCTGGTCAAGTGAATGACAGCGCCTACCCAGACTCCCCCATGAGCACATTCACAAGTCCTTCACTTTCACACCTGCATCTGCCCCTCACCTTTGGGCACCGGTGCACACCTCTGTAAGTACACGCACCCAGCGGTGCCCCAAAGGCATCTGCTCCCATAGCCCCAGCCCACATGCTCACCCACACCTTTCTCTTTGGCTACTTCCTGGAGAGCAGGCATGAAGCTCCTGGCCCAAGCATTTCTGGTGCCTCCCAGAGCACCCTGGGGCTCCTTTGGTCCTGTTGCCACACCCACTCCTGCTCTTTCTGCTCCTCCTGAACTGGTTGCAAAGCTAACACTTAATCTGGAGGAGGATGTGTGCATCAGAGGTGCTTCATCGGAGGCACTTCCTGGGGCAGGTGGGTAGAGGCCAGTGTCCAGCCGAGGGCCCACCCCAAGGCAGCTGCCCTACATTTTTATGACAGATGGTCCCAGAGACAATCCACAGTGACCACTGGGTGTGGCCGTAGGCCTCTCTCCAAAGAAGAGGAGAGCTGGCCAGACCATCATGCCAAGAGCCAAGGGTAAGGCACCCCTCAGGTCCCGAGGGGAAGCTCTCCTTGGCCAGGGCCTTTGCAGACAGAGAGGAGGAGGGGGCAGGAGAGCACACTCCACTCCTTCTTCTCTGGTCTTTACTGAGATACTCCCTGTTGGTGGGGGAGGGAAACAAGTATACAAGGGTCTGGTCGAGGAGAGAGGTCCATGGGAGATCCAAATGTGGGGTCATCAGCATGTTGGTGGTATTTAAAGGCAGGAGGCTGGCCTCACTCAGGATGTACTCGGAGGGGAGGTCTGGGGCCTGAGCCCCGAGCAATCTGGGGTTGCCAGTCTGAGTCTGGGGGAGCAAGAGGCTCCGCAAGGAGCCTTAAGAACAGCAGAGGTGGGAGGAACCCAGGGGCGCTTGCCCTCCAGGGTGGCTGTACTCCCCCTCACAGTTCTCAGCAGTCCCCGCAGCCACGGCCCGTCTGAGTGAAGAAGTATGTCCCCCCAGCACTGTAGCCTTAGACAGTCTGTCCCATGGGAACTCCAGAGCAGCCACTGGGCGTGGCCACACGAGGCACCTACACCAGCTGAGCCTGGCAGCAGGCGCCCTGAGGAACCTTGCTCCCTTCCTGCCGGCAGGATGGCAGGGCTGCTTCTCCAGTGAGGACTGTAAGGAAAGTTGTTTCTGGGGCTCAGCCCAGGAATCTCCCCAGATATGAGCTATGGGACTGGGTCAGCAGAGCCAGCTCGTTCCAGCTTCCGAAGTCCCCCATGCACAGCCTCCCACCCCCTTCTCTTCCCCCCACCCCCTGCCTGGCACTGGGGCCTTTCAGCCTCAGGGCCTTCAGCATGGTCCAGAGCGTGTGGTCCAAGGCAACGACAATTAGGCCACTGGGGAGAGGTGGTGGAAACGGTCCTTAAGAGACCCCATTGTGTACCCCCCACCCACTGGAAATGGGCAACAAATAGGACCCCTGCAGGAGAGACCCCACAGCTGTGGGGGGAACACATCGGAGGGGCCTGGGGACAGAAGCCCATTCTTCCCCATGGGTGGGGTGGGGCCAGGGTGACCGCTGGGC TCONS_00144072 r 3' 346 TCONS_00144073 TCONS_00144074 r 5' 444 EMBV3_39894 GCCGGGCGTACGCCGAAACTGTGGAGTTCTGAGGTGACCAAAGCCACATCATGTCCGTAG Variant GeneID:508143|MRPS17:NM_001024500:272_cdna 51^103 1 EMBV3_31452 GeneID:508143 25 GENE MRPS17 MGC137051 mitochondrial ribosomal protein S17 EMBV3_14152 GGGAGGCCCCCCAGCCCTGGAAGAAGACATGACGGTCATTAACATCAACAGCAGTGATGA Gene GeneID:787413|PELP1:XM_002695777:275_cdna Constitutive 0 NULL GeneID:787413 19 GENE PELP1 NULL proline, glutamate and leucine rich protein 1 EMBV3_25380 GATCAGGTGTGATGAAGAACTGGAAACACTTCTCCTTGGCCCCGCATTGGAAGGGTCCAT Gene BVV0102_069876 + 0 NULL GK000004.2:107821623-107839214 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29461 CTCTTTCTTTTACACAATACCAACATCACTGGCCCAGAATCTTTTCTGTGCTAGGTTGTA Gene GeneID:521194|MAML2:NM_001098050:11_cdna Constitutive 2 NULL GeneID:521194 15 GENE MAML2 MGC143419 mastermind-like 2 (Drosophila) EMBV3_37842 CACCAGACTATTCATACTGGAGAGAAGCCCTATGTTTGTGCTGATTGTGGCAGGGCCTTC Gene GeneID:100141016|ZNF81:XM_002700089:194_cdna Constitutive 0 NULL GeneID:100141016 X GENE ZNF81 NULL zinc finger protein 81 EMBV3_16994 GGTGTGTGTGGTACTATTTGTAGAATGCTGAACCCAATTTGCAAGTTGTACTGTATGCGG Gene BVT0102_185898 + 0 NULL GK000016.2:37883675-37903416 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069121 TCONS_00069123 TCONS_00069118 TCONS_00069114 TCONS_00069122 TCONS_00069117 TCONS_00069113 TCONS_00069116 TCONS_00069120 TCONS_00069115 TCONS_00069124 TCONS_00069119 1 XLOC_041866 Coding TCONS_00069114 XLOC_041866 Coding Coding SLC19A2 16:37902451-37930228 j TSS51590 3139 1 TCONS_00069114_4 384 6 0.887204781105991 0.00144832390744535 0.00357119407361051 0.00103559334884687 5.98992978066658e-08 0.0018534131494401 5.72415919410028e-13 0.000800854471419137 0.00181823433314235 0.00143254409501651 0.000132668845640639 3.14856149529066e-05 7.48855200257968e-05 5.0392817076549e-17 2.64435902831263e-31 5.33010236653277e-29 1.33299754248469e-98 0.000643051651965347 0.00637661341815969 5.20717583658267e-26 0.00128838647325062 1.17083649648716e-05 2.37267002375031e-185 0.000723558282553052 0.000605287771091512 0.000892608324228253 2.28404438545425e-14 0.0020669795023547 7.68240608452524e-11 3.63424619378135e-05 7.44220076962901e-09 NM_001206010.1 thiamine transporter Bos taurus solute carrier family 19 (thiamine transporter), member 0.0 3883 99.91 0.687161516406499 NM_006996.2 thiamine transporter Homo sapiens solute carrier family 19 (thiamine transporter), 0.0 3079 81.58 0.994584262503982 TCONS_00069114_4 sp|O60779|S19A2_HUMAN S19A2_HUMAN Thiamine transporter 1; 0.0 667 91.67 0.997395833333333 2 coding 1 1 1 1 -0.212549222911559 0.204084992148296 -0.111450565291018 0.0782459562701108 ACACGGTGAGTCAGCCGTCTTCAATGAAATATATCCAGTATGGACTTACTCTTACCTGGTGCTGCTGTTTCCTGTGTTCCTTGCCACAGACTACCTCCGCTATAAGCCTGTCGTTCTGCTCCAGGGACTCAGCCTTATTGTTACGTGGTTCATGCTGCTGTATGCCCAGGGACTGCTGGCCATTCAGTTCTTGGAATTCTTCTATGGCATCGCCACTGCCACTGAAATTGCCTACTACTCCTACATCTACAGTGTGGTAGACCTGAGCATGTACCAGAAAGTCACGAGCTACTGTCGAAGTGCCACATTGGTGGGCTTCACAGTGGGCTCTGTCCTGGGGCAGATCCTCGTCTCAGTGGCATCCTGGTCCCTGTTCAGCCTGAATGTCATCTCTCTCACCTGTGTTTCTGTGGCCTTCGCTGTGGCCTGGTTTCTGCCTATGCCACAGAAGAGCCTTTTCTTTCACCACGTTCCTCCCTCCTGCCAGGGGACAAATGGCATCAAGATACAAAATGGTGGCGTTGCTACTGACACCGCAGCTTCTAACCACCGTCCGCAGTGGGAGGACGTTGAATCAAAAATCCCTCTAAATCGGGAGGAGCCACCGGTGGAGGAGCAGGAATCCAAGCCAGACCGTCTCCTCGTGCTGAAGGTCCTGTGGAATGACTTCCTGGTGTGCTACTCCTCTCGCCCTCTGCTCTGCTGGTCTGTGTGGTGGGCCCTCTCCACCTGTGGCTATTTTCAAGTTGTGAACTACGCACAGGGCCTGTGGGAGCAGGTGATGCCTTCCCGCCATGCTGCTATCTATAATGGCGGTGTGGAGGCCGTTTCAACCTTACTGGGTGCTGTTGCAGTGTTTGCAGTTGGTTACATAAAAATATCCTGGTCCACTTGGGGAGAATTGACACTGTCTCTCTTCTCTCTCCTGATTGCTGCTGCAGTGTATATCATGGACACTGTGGGTAACATTTGGGTGTGCTACGCATCCTACGTTGTCTTCAGAATCATCTACATGTTACTCATCACAATAGCAACTTTTCAGATAGCTGCAAACCTCAGCATGGAGCGCTATGCCTTAGTGTTTGGTGTAAATACCTTCATTGCCCTAGCACTTCAGACTCTGCTCACTCTAATTGTGGTAGATGCCAGTGGCCTTGGCTTGGAAATTACCACTCAGTTCTTCATCTACGCTGGTTACTTTGCACTCATCGCTGTGGTTTTCCTGGCTAATGGTACAGTCAGTATTATGAAGAAATATAGAAAGCAAGAAGATCCAGAATCAAGTTCTCAAGAGACCCCCTCATAACATACTGCAAAAGAGCTTCATATTGCAAGAATTCTGCACAACGGCTGTAACCGGCTGTATTTAATTTTTTAAAGTGTAGACACATATTTATGAGTATGCATTTCATGGCTTCAAAGCAGCCAGTTGACTATACCTTGTCTTCCCAGAGTAACAATACAGTTGAGAAATGAAGTGTACTTCCTGGAATACTTATGAGAGCCAATTTAAGAATCTGTTTTTCCTGCTTCAAAAGTGAACTTGCTTTTGAAAACCAAGAATCAAGAGCAATTAGGCAGCACATGGTAATGTACACATGCTCACAAGTGAGTCTGGTGTTTCATAGGTCAAGTATTCTACTTCTGTGTCTGATTAGCCAGATGCTTGGCCTGTTGGGACCAGGGCTTCACGGGCCACAGGATGTTACAGTCAGAATCGAAATAGTGTTCTAACAGCATCTGCCTCTGTTCAACTTAGTTCTCATGTCTGTGTTACTCATGTGCGTTTGTTTCTACAGATGACAACATTTGCCCTGGTTTGGTGTTCTGTAAAGAATATGTGTTAATTCTGAGTTATCTTTAAAAATTCATTGTGTAAATACTCTCAGTGCCCATCTTGACTGTTGTGTATTTGTGTTGATTTCTTAGAAGTATATTTTTACATTATTCATATGCTTCCCAGAGAAGCTAATTTAGTTAAAAAATAAGGCAAGTTTTGAGGCCTACTAATAATATAAGTGACCTAATGGAAAACTTAAGGTAGGTTTACTTGTCTTGTATTCTTCGGTATGAAGGACTATTAAATCTATGATGAAAAGTTACTAAGTGGGCTAAAGGCATAACTAGTCCATTTTGTATCTGCAGATCTCCAAAATAAAATGGGAAAGTCTTCTTAAAATAACTTCATCTCCCTTTATGGCATTTATACTGTTTGTCCTTCTTATCCAAGATAAAGGTGTCATTAATTGTTGGATTATTCCAAGGTCTTTTTCACAAACTGAGCCTCTTTATTTTGGTGGGACAGGACGTATGATGGACTTGGTTCCTGCATTTTGTATATTAAATTTGCCTTTGTTTATAAAGGTGCATCTTCTTAAATAATCTGCTTAAAATAAGAATTGCTATTGATTCCAAGTTACTTGAAAAATGTTATTCTGTGTACATTTAAGTGGGAGATTAGTCTACCAAGTGACTGCTAGCATATGTGAGACATGATAACTATTTTAAAGCCAATTTTGTTGCCTTATCTTAAAAAAAAAAAAAGCTAGGTCAACTTTTTTAGAATGACGTAGGTAAATACTGAATAGTAATGTCAAGATTCCAAAACTGACTTATTCATTTATGTAAGCAAGAATTCTAGAAGCAAATTAATGAGGATAAGAATAAGTCATTTTCTAGTCACCTTCCTTTCTGAGTAAAAGAAAGGAGAAGAGCACTAGCTAAGGAAGGAAAAAGGAAGCGATATCATAAACATCAGCCTCTAATTTTGTATTTTGTCGTCGTTTTATTTTGCTACATAGGGAATGTATACTCAGAAACAAGTAGAAAAATGGTGTTTGAGGAATTTAATTTTTTTAATAAAATAGACTGTGGCACAATCAAACTATTCATGTAACTAAAGCAGTATTTCCCTGGAATTTAAGTCACAGTTGGTTTTATACAATCAGAGCCTTTACTTAAGACAATAATAAGTTCCTATCTTGGTGTGTGTGGTACTATTTGTAGAATGCTGAACCCAATTTGCAAGTTGTACTGTATGCGGTTTTGGAAAGAAGTGCAAATAATTTGTTGTACTTTTTATTCAATACTGTATAGATTATACAATTATTTTTTATTAAATAAATATTTTGCAGTATAT EMBV3_13068 TTCCTACTGAAGCAGCAAGCGTCCCAGCACTGAAGCGTGAATGAAGAAAAAGGCTGAGTG Gene BVV0102_238308 + 1 EMBV3_08122 GK000001.2:70838108-70841811 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41291 TCATGATTCTCTCTCCTGAATCCTGTTCCCTCCAGAGTCCTCAATTAAGTCAATCGACCT Gene BVV0102_232999 - 1 EMBV3_15762 GK000029.2:46716792-46759817 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35911 CACCTGGGTCCCCTGCAGGTGGCTCGGGTCCTGGATTTCTGGACTGGCCACAGGGCACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28771 CCATGGTCGTATTATGGGACTTGGCCGGTCTTAGGATCTTGTGCCTGAAAATAGCCTGAG Gene GeneID:280710|TNK2:NM_173885:5_cdna Constitutive 0 NULL GeneID:280710 1 GENE TNK2 ACK ACK1 MGC137695 tyrosine kinase, non-receptor, 2 EMBV3_42653 ATGCCACAGCACGTCAGAAGCCTAAGGAGTTCAGGTTGCCGAAAGACCATCAGTTTGACA Gene GeneID:615440|NDUFAF4:NM_001083516:8_cdna Constitutive 0 NULL GeneID:615440 9 GENE NDUFAF4 C9H6ORF66 HRPAP20 MGC139248 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 EMBV3_35111 TGTGGTCTTTGGCAAGGTGAAAGAGGGCATGAATATTGTAGAAGACATGGAGCGCTTTGG Gene GeneID:524595|LOC524595:XM_002695560:68_cdna Constitutive 0 NULL GeneID:524595 19 GENE LOC524595 NULL similar to Peptidyl-prolyl cis-trans isomerase A (PPIase A) (Rotamase A) (Cyclophilin A) (Cyclosporin A-binding protein) EMBV3_31346 TATTCACTGGGTCTCCTCAAGCAGGCCCTAAAGGTCCCTTGACTGAAAGAGGAGAGATCT Gene BVV0102_082035 + 0 NULL GK000029.2:43617818-43623209 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15570 AAACAGCTTCCGGACCCCTATCCAAGAGGAGCACACTGATGCCAACTCCAGCCTGGCCAA Gene GeneID:528782|TNFRSF4:NM_001099043:160_cdna Constitutive 0 NULL GeneID:528782 16 GENE TNFRSF4 MGC152529 tumor necrosis factor receptor superfamily, member 4 EMBV3_24391 TGACTCAGCAGTCCTCGGTACCCTGGTGGGGAACAGGCCATCACCCTCAGTATTTCTCAA Gene BVV0102_299990 + 1 EMBV3_01416 GK000020.2:33774649-34415200 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15143 GTGCTGTGCCAAAGTCAGGTCTGATTCCAAAGTTCCCTCTGTCTTCCTTGGTGACGCCCT Gene GeneID:533726|DHCR24:NM_001103276:85_cdna Constitutive 0 NULL GeneID:533726 3 GENE DHCR24 MGC166411 24-dehydrocholesterol reductase EMBV3_00355 CTTCTCATGGACCTAATGGGCTTGGAAAGGTGGATTGCCCCTGATGGTGATTATCCATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11708 ACCCAAGGCCAGCGAGAACAGCGAGTGCTCCGCCTTTACACTCTATGGGATTTACTACAA Gene GeneID:525923|CLPS:NM_001077967:41_cdna Constitutive 0 NULL GeneID:525923 23 GENE CLPS MGC157391 colipase, pancreatic EMBV3_34215 CACATGCTCAACAATTCGAAGAGATGCACCAAAAACTGCAATGCCTGTGGCCAGCACTGG Gene BVV0102_167382 + 0 NULL GK000003.2:110890550-110912291 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174727 TCONS_00174726 TCONS_00174728 TCONS_00174730 TCONS_00174729 1 XLOC_104676 Coding TCONS_00174730 XLOC_104676 Coding Coding ZMYM4 3:110908434-111074071 = TSS129605 9391 1 TCONS_00174730_5 1550 0.00777340006389096 30 0.943484508198701 4.61335678903897e-06 1.68250873464422e-11 3.17630138203276e-05 5.98218759312096e-11 1.99952253894645e-25 3.31896600474323e-33 6.82633771394461e-12 1.08571024408083e-11 1.96307641772283e-10 1.14309554465803e-30 1.04465110421686e-09 3.38005228617356e-12 1.09879210015108e-10 4.73241138228908e-12 1.83762213168883e-11 0.000949908351641084 0.000874853975959084 0.000632857246626546 1.41195719302576e-05 1.93604491845594e-10 7.46063598650303e-14 1.49495261307388e-38 0.000268900673110165 0.000188731329690384 2.23899954257011e-39 9.92432703006492e-12 2.04658233217693e-11 1.08199401725941e-08 2.09536390704881e-05 3.08070717777861e-26 XM_002686481.3 ZMYM4 PREDICTED: Bos taurus zinc finger, MYM-type 4 (ZMYM4), transcript 0.0 1.290e+04 100.00 0.761260781599404 XM_005271328.1 ZMYM4 PREDICTED: Homo sapiens zinc finger, MYM-type 4 (ZMYM4), transcript 0.0 9945 91.05 0.757320839101267 TCONS_00174730_5 sp|Q5VZL5|ZMYM4_HUMAN ZMYM4_HUMAN Zinc finger MYM-type protein 4; 0.0 3058 97.23 0.999354838709677 2 coding 0 1 1 1 -0.0356333866796178 0.796799996155604 0.040092702087167 0.622566882542453 CCCCCTTTCCCGGGCAGGCCCTACCGCCTACGCTCGCACCCGTGGGATCTCAAGATCTCCGACCCGGCGCGCGGCATCCGCCCCCTCCCCACTCTAAGCGCCAGGCCCGGCCAGGTTCGGGGACGCTGCCGCGAGGCGGCTATTCCTGCAGTGTGGGCGGGGGCCGGGGGCCCGAGAGGTTCCGCCGCCACCGTGCTGGGAGCCGCAGCGGTTCCGAGCGGGGCCCAACATGGCGGAGAGAGAGGTGGAGTCCGGCCCCCGAAAGAGGTTTGAGCAGAAAACTGGTGCAGTTTTTGATGAAATTGTAGAGAACTGTGGTGGTATCATGGATACAGAAATGTCTGAAGATATAGACCACAACTTAACTCCTACCCTTGACAGCATGTCTTATGGAATGCCGAATCAAACAGGATCTGAAAATTCATTGCTGGATGAAGATGATTATTTTTTGAACTCTGGGGATCTTGCAGGAATTCCAGTCGTTGGTAGTGACAATGAGGATGAACAGGATTTTAGTTCAAAGGACAATCTTGTTTCTTCAATTCATACTGATGATAGCTTGGAAGTAGAGAGAAGAGTCACACAGCATGAATCAGACAATGAAAATGAAATACAGATTCAAAATAAATTAAAAAAAGACTTTCCTAAACAGTTTGATCAGGTTTCTGTCTTTAAATCAATACGGAAAGATTTTAGTCTAGTAAGAGAAAACAGCAAAGAGACATTTTCTGGAAAGGAGAAAAATAGAGACCTAACTTATCATGAACGTGAAAAACGGTTGGATAAACCCCATAAAGAGTTGGATTCAAGGTTGAAAAGCAGTTTTTTTGATAAAGCAGCTAATCAAGTTGAAGAAACATTACATACCCATTTACCACAAACCCCAGAAACAAACTTTAGGGATTCCAGCTATCCATTTGCCAATAAAGAATCCATTGGTTCGGAACTGGGAAATTCCTTTGCATCAAATATTAGAATTAAAGAAGAACCTTTGGATGATGAGTATGACAAAGCAATGGCACCACAGCAGGGACTACTAGACAGAATTAAAGATGAACCTGACAATGCTCAAGAGTATAGTCATGGCCAACAGCAAAAAACTCAAGAGGGGGAACTGAAAATTAGCGCTGTGTTTTCAGTCAGTGGCAGTCCTCTTGCTCCACAGTTGACTACTGGCTTTCAGCCTTCACTGGCGTCATCTGGCATGAATAAAATGCTTCCTTCAGTTCCAGCCACAGCTGTTCGAGTTTCCTGTTCTGGTTGTAAAAAAATCCTCCAGAAGGGGCAAACTGCTTATCAGAGGAAAGGGTCTACGCAGCTGTTCTGCTCTACATTGTGCCTCACTGGATATACAGTTCCACCTGCCCGCCCACCGCCTCCTCCCACTAAGAAAACTTGCTCAAGTTGCTCAAAAGACATTTTAAATCCAAAGGATGTGATCAGTGCCCAGTTTGAAAATACCACCACTAGTAAAGATTTTTGTAGTCAGTCGTGTTTGTCAACATATGAACTGAAAAGAAAACCTGTTGTTACCATAAATACAAATAGCATTTCAACTAAATGCAGCATGTGTCAGAAGAATGCTGTTATTCGACATGAAGTTAATTACCAGAATGTGGTACATAAACTTTGCAGTGATGCCTGCTTCTCTAAATTTCGCTCTGCTAACAATCTCACCATGAACTGTTGTGAAAACTGTGGGGGTTACTGCTACAGTGGCTCTGGACAATGCCACATGCTTCAGATAGAGGGACAGTCTAAGAAGTTTTGTAGTTCAACATGTGTCACAGCATATAAGCAGAAATCAGCCAAAATTACACCGTGTGCGCTTTGCAAATCATTGAGATCCTCAGCAGAAATGATTGAAAATACCAATAGCTTGGGAAAGACAGAGCTTTTCTGTTCTGTTAATTGCTTATCTGCTTACAGAGTTAAAATGGTTACTTCTGCAGGTGTGCAAGTTCAGTGTAACAGTTGTAAAACCTCAGCAATCCCTCAGTATCACCTAGCCATGTCAGATGGAAGTATACGCAACTTCTGCAGCTACAGTTGTGTGGTAGCTTTCCAGAATTTGTTCAACAAACCAGCAGGAATGAATTCTTCAGTAGTGCCCTTGTCTCAGGGCCAAGTAATTGTAAGCATCCCTACAGGTTCAACAGTGTCAGCAGGAGGGGGTAACACCTCTGCTGTTTCTCCCACTTCCATCAGCAGCTCTGCTGCAGCTGGTCTCCAGCGTCTTGCTGCCCAATCCCAACATGTGGGGTTTGCACGAAGTGTTGTAAAACTCAAGTGTCAGCACTGTAACCGTCTTTTTGCCACAAAACCAGAACTTCTCGACTATAAGGGTAAAATGTTTCAGTTCTGTGGCAAAAATTGTTCTGATGAATATAAGAAAATAAATAATGTAATGGCAATGTGTGAATATTGTAAAATTGAGAAAATTATAAAGGAGACTGTACGATTCTCAGGGGCTGACAAGTCATTCTGTAGTGAAGGTTGCAAATTGCTTTATAAACATGACTTGGCAAAACGCTGGGGAAATCACTGTAAAATGTGCAGTTATTGTTTACAGACATCTCCCAAATTGGTACAGAATAATTTAGGGGGGAAAGTAGAAGAGTTTTGTTGTGAAGAATGCATGTCCAAATATACAGTTTTGCTCTGTCAGATGGCAAAATGTGATGGTTGTAAGCGACAGGGTAAGCTCAGTGAGTCCTTGAAATGGCGGGGAGAAATGAAACATTTCTGTAACCTGCTTTGTATTTTGATGTTCTGTAATCAGCAAAGTATGTGTGACCCACCTTCACAAAACAATGCAGCAAGTATTTCCATGGTGCCAGCTGCTTCAGCAGGGCCGCCATCTCTAAGAAAAGATTCAACTCCAGTTATAGCTAATGTGGTATCATTAGCAAGTGCTCCTGCTGCTCAGCCCACAGTGAATTCTAACAGTGTCTTACAAGGTGCAGTTCCAACAGTAACAGCAAAAATCATTGGGGATGCAAGTACACAAACAGATGTCCTAAAACTGCCACCTTCCCAGCCTCCAAGACTTCTGAAGAATAAAGCTTTATTGTGCAAACCCATCACACAGACCAAGGCCACCTCTTGCAAACCACATACACAAAACAAAGAATGCCAGACAGAAGACACTCCAGCTCAGCCCCAAATTATTGCGGTGCCAGTTCCAGTACCAGTGTTTGTACCTGTACCTCTTCATCTTTATACTCAGTATGCACCAGTCCCATTTGGAATTCCAGTTCCAATGCCTGTCCCTATGCTTATTCCATCCTCAATGGGTAACGAAGATAAAGTCACTGAGAGTATTGAGGACATTAAGGAAAAGCTTCCCTCACATCCTTTTGAAGCTGATCTCCTTGAAATGGCAGAAATGATTGCAGAAGATGAGGAGAAGGAGAAGACTCTATCTCAGGGAGAATCCCAAACTTCTGAACAGGAACTCTTTTTAGACACCAAGATATTTGAAAAAGACCAAGGAAGTACTTACAGTGGTGATCTTGAATCAGAGGCAGTATCTACTCCACATAGCTGGGAGGAAGAATTAAATCATTATGCCTTAAAGTCAAATACTGTGCAAGAGGCTGATTTAGAAGTGAAGCAGTTCTCAAAAGGGGAAACTGAACAGGATCTGGAAGCAGATTTCCCCTCAGAATCCTTTGACCCATTAAACAAGGGACAGGGAATCCAGGTACGTTCCCGAACGAGAAGACGACACAGAGACGGCTTCCCCCAGCCCAGACGAAGAGGACGGAAGAAGTCTATAGTATCTGTGGAGCCCAGGAGTCTTATTCAAGGAGCCTTTCAAGGGTGCTCAGTGTCTGGGATGACATTGAAATACATGTATGGGGTAAACGCCTGGAGGAACTGGGTTCAGTGGAAAAATGCCAAGGAAGAGCAGGGGGACCTGAAGTGTGGCGGAGTTGAACATGCCTCATCTAGCCCGTGTTCTGACCCATTAGGAAGTACTCAAGAGCATGCACTCTCTCAAGAATCTTCAGAGCCAGGCTGTAAAGTCCGCTCTATCAAGCTGAAGGAAGATATTCTGTCCTGCACTTTTGCTGAGTTGAGTTTAGGCTTATGCCAGTTTATTCAAGAAGTGCGGAGACCAAATGGTGAAAAATATGATCCAGACAGTATCTTATACTTGTGCCTTGGAATTCAGCAGTACCTGTTTGAAAATGGTAGAATAGATAACATTTTTACTGAGCCCTATTCCAGATTTATGATTGAACTTACCAAACTCTTGAAAATATGGGAACCTACAATACTTCCTAATGGTTACATGTTCTCTCGCATTGAAGAAGAGCATTTGTGGGAGTGCAAACAGCTGGGCGCTTACTCACCAATCGTCCTCTTGAACACCCTCCTTTTCTTCAATACCAAATACTTTCAACTACGGAATGTTACTGAGCACTTGCAGCTTTCTTTTGCCCATGTGATGAGGCGGACGAGGACGCTGAAGTACAGCACCAAGATGACATATCTGAGGTTCTTCCCACCTTCACAGAAACAAGAGTCGGAACCAGATAAACTAACCATTGGCAAGAGGAAACGAAATGAAGATGATGATGTTCCAGTGGGTGTGGAGATGGCAGAGAATACTGATAACCCCCTCAGATGCCCAGTCCGACTTTATGAGTTTTATCTGTCCAAATGCTCTGAAAGTGTGAAGCAGAGGAATGATGTGTTTTACCTTCAGCCTGAGCGCTCCTGTGTTCCAAATAGCCCCATGTGGTACTCCACATTTCCCATAGACCCTGGGACCTTGGACACCATGTTAACACGTATTCTCATGGTGAGGGAGGTACACGAAGAACTTGCCAAAGCCAAATCAGAAGACTCTGATGTTGAGTTATCAGATTAAAGTGGAAGTAGGGTTCCTATTTTCATACGTGTTGGTATGCACCAAATTGTGAATGCATCCAGCTTTGGAAAATGATAAGTCCCAAGTCCTCTTGACTTGATTATGAGGTAATGGAGAACAGACAGCTCGTGAACCAGTGTGGATGTACAAATGGCAACTGAAGGAAAGAATGTGAGCTGAGAAACCTTGTTCTCCAGCAGTGATATTGCTCTTAGACATCTTCAGAATGACTAACCAATTTCTCTGAGTGGTGCATAATCTTATTTTGTTTGGGAATAACAAATTGTGGAATATTTTTAAGGAAAACTGTTGTATAAAATTCTACCATAGTAACCTTAGACCTTAGAGAGGTAGCTTTGGAGTGAAGCCTTGGCTGCAGTAGGCTACTTGGGCAAGCCCTCTGTAAGAGTCAGGGCAGAAATCAGTACAGAGCTAAGAGTGGCATCAGATGAGGACTGTGGGGCCCAGACTTGAAGACCCAGTAAAAATACTCAGCCTTTTTTTTTTTTTAAAGGTAGAGAGTGAAGTGGTCTTGATTTTGATTTTCACTGCCAAGCCAATTCTGTGAAGGATAGAAGCCTCTGGTGCTTTTGCCATAGGGTCCCTCACATCAGGGGAAAAGGCCTTCACTGCTGTTCATACAGTAATGTGTCCCCTTCACTTTCTGGGTCTAGCCTTCTCAGCTGTGGGTCTGGATGTGGGTAAATTAAGTTAAAGGGGCTGAAACTTGCAAAATAATTATGCACACAGAAAATCTGTGGCACTTGTTAGACCCCAGGTGTTTTGAAATGTTTGTAGAAAACCCACTAAAATGCCCACTTCTCTGGGTGTCAGCCTTTATTGCTGCTGTCTCACAGCATGAGCTGTGGCGCACAGAAGTGGGGGTTCTTTTGTTTTTATTTTATCCCCAAATGGCAGCTTTCCTCCTGTTGTTTTATCTTCCCGTTTCCCAAATAATTTCTGTTATTTTGTCTTTTGCACCAGTTTCTGGAGGCCCTTGTCATTTCAAAAAGAAGAGTCTCTCCTTTCTCTGGCAAACCTGTGGGTGATTCCACAGAGACACAGTGTTACTTAGCTATCAGAATTATGGTAGAAGAAGAACTAGTATTTTCCTATGTAAAGCATTGGAAGATGACCTTGTTACCCTAAGACACTTAAATAAATAAATAGGATTCTGGGGTTAGTATACAAAGACACTGACAGTCTTGCAAAGACCCACAAGGTCCTCTTACAGCATTATTCCAAACTCTAGCTGTTTTAGTAGTTTGATGAGGATCAAGTCATAGGAGTGTTTGGCAAATGGATCCATTTCCTTCTTCTCCATTCTGTTTCTTCCCCACAAAATTTTGAATCAAAGCTTCTATAATATTGGCCAATCACAGAATTTCCTTAGGTGAGGTTAATTTGATCCTTTAATAGAAATGAGAGAAGTCTAAAAAGCCTCTTAGAAATTTTAACCTTGAAAGACTTTACTATATGTCCCATTTTTTTAGATGGGAGTGGCAGGTGGTTTTTTTGTTTTTTAATAAATAAATTTAAATACAATGAAAATTTTAAAGTAGGCCTTTTGACATTGTGTACTTATGGTTCTGTCCTGTAACAAATCTTGTTTTTGTTACCAAGAACTGTGTGAAAGAAGTAAATCTGCCCCAGTTCTGTATGACTAATTCCATCTGTGTTTGTCATTTCTGACTGGAAAACTTACTTCCAGACCTTGTTTGATATGGAGGAAAAACAATTGGATTGTCTGATAAGTCTGCCAATAAACTATCCAGAAACATCAGGTGTAATAGTCCCCACTAAGAAATTTTATGGTTTATATAAACACTAATGTTTCCCCTTCTGTAGAAATGCAAATTTATGGCATAGTAGATAAACTATTATAAAACACTAGAGAGAGGAAAAAATTCTGTATCTTTTAATTGAGAACAGCCAATATCCAGGTAAATGACTGTATCAAGATGTCAATTGCATGTTAGTCCACAGAGTTGTCCAGATCCTGGAATAATTTGTAAAAGAAAATATTGATTCATTATTGGTCATTCCTCATAAGCATAGCTGTTGATGTGTGTGTCCAGTTATTTGCTTTTTTAAATTTTATTAAAATAATGTAAAATTGGTTCTTTTTCCCCCAGGGGAGGAAAAAATATCAAACAAGAGAAACATTAAATTATCTGTTGTTCTTTGTTTTTTAAACACTTTCGGGTTTTCACCTTGCAGAAACCACAGAAATATTCCCTTAGAATAAAATAGTATATTTGTATTTGATGGGTGAATTATTCATTTTCTTTATGTCTTGAAAGAATTTTAAATATTTTTTTCTGTTTGACCCTATTGGTATGATCCAACAGATGGTATATTACAAAGAAAAAGATCAGTTTTCAGAAAATAAATTATTTGGTTTTTACTCAGTCCAGAAAACATTGTTTCATTGCAAAATCTTTTCAATTGTTTTTTTTCCCCCATCAAAGACTTGTTCTGGTTTTTAATTTATTACTATTTTCAAAGCCCTGAAAGCTAGAAGTATCAAGTATTAGGTTGGTGCAAAAGTAACTGCGGTTTTGCATTGTTGAACTTTGCTGTTTGATATTAATGAGCACATTCTTAAATGTGGTTATATTATACATTATTTTAATGCACATTTCTTTTGCTAATGACTTATTACTTGCTGTTTATTTTAGATTAGGGAAATGATGATGTTAGACAAAAAGCAAGTTCTAGTAATTTTCTTATTTGAGTTCAAAATGGGTCATAAAACAGTAGAGACAACTCACAACATCAACAATGCACTTGGCCCAGGAACTGGTGATTCAAGAAGTTTTGCAAAGGAAACAAGACCCTTGACAATGAGGAGTGCAGTGTTTGGCTGTGGGAAGTTCACAGCAGCAAATTGAGAGGATCATCGAAGCTGATCCTCTTACAACTACGCAAGAAGTTGCCGAAGAACTCAGCGTGGACCACTCTATGGTCATTTGGCATTTGAAGCAAATTGGAAAAGTGAAAAAGCTTGGGAAGTGGGTACCTCACTTATCTTGCGGCTGACTGCAAATCAAAAAAATCATCATTTTTAAGTGTCATCTTAATTCTACACAACTACAACAAACCATTTCTTGATCAGATTATGACATGTGACAAAAAGTGGATTTATACAAGGCAACAACCAGCTCAGTGGCTGGATCGAGAAGAAGCCACAAAGCACTTCCCAAAGCTAAACTTGAACCAAAAAACAGTCAGGGTCAGTGGCGGTCTGCTGCCCATCTGATTCACTGTAGCTTTCTGAATCCCATCAAAACCATTACATCTGAGACACATGCTCAACAATTCGAAGAGATGCACCAAAAACTGCAATGCCTGTGGCCAGCACTGGTCACCAGAAAGGACCCAGTTCTGCATGACAACACCTGACTGCACACTGCACAACCGACACTTCAAAAGTAGGATGATTCTTCAAAAATTGGATGAATTGGGCTGTGAAGTGTTGCCTCATCTGCCACATTGACCCGACCTCTCACCAGCCAACCGTCACTTCTCCAAGCATCTCAACAGCTTTTTACAGAGGAAATGATCCCACAACCAGCAGGGGGCAGAGAATGCCTTCCAGGAGTTCTTCGAATCCTGAAGCACAGATTCTTACGCGATGGGAATAAAACTTGTTTCTCATTGGCAAAAATGTGTTGATTGCAGTAATTCCTATTTTGATTATTAAAGATGTACTTGATCCTACTCACAATGATTTAAAATTCATAGTCCGAAACCGCAGTTATGTTTGCATCAACCTGATCTGTATTTCATTTTAGGCAGACTTTTTTTTAGATTTACACAGCTTAACCTAGTTCAACTTGAATCATTTTGAAATCATGAGATTAGAATAAAGAATATATTCTTAAGTATGAATACATAGTTAATTTGGGAATGTAAGACTAAGTGGTATTTTCCTTAGACTTTCTAGTTATCTTGGTATTGTGCAAATATACCTTCAGATTCCACATAGATTGTTTTTACCTACCTGCCTTGTGGCATTCCTATTTTTTTTAACAAAGTTTTCTGAGAAGTTTTAAGTTAAAATGAAATTATGTAAATGAGTCCCAGTTTTTCTATTAAATTCAAAATTTAATTTTCTATGCAAATAGAAAAAGTCCTTGTGATTCTGAGTTGAAATAAGCAACAGTACCCCCAATTCCTCCTGTCTGTCATCATCATACCTTATTTCATCATTGAAAAATAATTGTGAGCCTTCGTTACAGAGCGGGAAGGTCGGAAGCTCTGGAGCCTGGTCTTTACTGTTTGTATAGCCTTAAGTTAGTTACCTAGCCTCTCTGTGCCTCAGTTTTCTCTTAAACTGGGAATAATATCAACTTCTGTAAGTTGTGCTTGGAACATGCTAGGTTTTCAATGTCAACTCTTTTTTACTATAACACCTGCAAATTCTAGGCATATAGTAAGATTTTAAATATATGCTAATTCCCCCGCTACAGCCTGAATTTTCACTAAATTCAGTGCTTCAGATTC EMBV3_31180 CTTCCGTTCAGTTGTAGATTAATACGAGCAGAGAGAGTGGTTAGAAAAGAGTGGAGCTGG Gene GeneID:531411|ENTPD4:NM_001077985:8_cdna Constitutive 0 NULL GeneID:531411 8 GENE ENTPD4 MGC142312 ectonucleoside triphosphate diphosphohydrolase 4 EMBV3_25605 CTGCGGTCATGGAACGATGCCTCCTGTGACAATACATTTCTTTTTATCTGTAAGCGGTCC Gene GeneID:511000|CD207:XM_002691221:53_cdna Constitutive 0 NULL GeneID:511000 11 GENE CD207 NULL CD207 molecule, langerin EMBV3_02514 CAGGTGGCATCAGAGTCCTCTGTTTGCAGGCCTCCGGGAACTTCCTAGACTAGTTAAAAT Gene BVV0102_053774 + 0 NULL GK000009.2:13209726-13233079 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06915 AAATATAGAGGTAGACCCCAGGCATCCCACCATGCTTCCTGAGTGCTGTTTTCTTGGAGC Gene GeneID:614512|FANCL:NM_001076332:170_cdna Constitutive 5 NULL GeneID:614512 11 GENE FANCL MGC133719 Fanconi anemia, complementation group L EMBV3_41013 GTGCTGTTCTGTATGAGATGCTCTATGGATTGCCTCCTTTTTATTGCCGAGACGTGGCTG Gene GeneID:504480|SGK3:XM_002692686:75_cdna UTR3_Alt 2 NULL GeneID:504480 14 GENE SGK3 NULL similar to Serine/threonine-protein kinase Sgk3 (Serum/glucocorticoid-regulated kinase 3) (Serum/glucocorticoid-regulated kinase-like) EMBV3_35156 GAAGGATATTGGTTACCAGGCGACGAAATTGGCCTGGATTCCTTCTGAGAACATCCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10689 ATCCCGCGGCCCGTGACTTTGTGGAAGAGACTCGGACGACTGCCTTTTCCTGTATTTTTA Gene GeneID:529468|KCNT1:XM_002691614:257_cdna Constitutive 0 NULL GeneID:529468 11 GENE KCNT1 NULL potassium channel, subfamily T, member 1 EMBV3_35452 GTCTTCATAGAGAAGCAGAAAGGGGAAATCCTAGGTGTGGTGATTGTGGAGTCTGGCTGG Gene GeneID:515571|APBA1:XM_002689634:6_cdna Constitutive 0 NULL GeneID:515571 8 GENE APBA1 NULL amyloid beta (A4) precursor protein-binding, family A, member 1 EMBV3_38259 TCTGCAGTATCTTTCCGCCCCACGAGGTGGACAGCATCATGGCCCTGTTCCCCGAGCTCT Gene GeneID:615863|ZC3H12D:XM_002690321:20_cdna Constitutive 0 NULL GeneID:615863 9 GENE ZC3H12D NULL zinc finger CCCH-type containing 12D EMBV3_13655 AGGGGAAAGGAAGGGGTGTAACATGGCCATGAAATTATAAAAGGTAAACTGGTCCCAGAG Gene GeneID:522747|GPR12:XM_002691840:104_cdna Constitutive 1 NULL GeneID:522747 12 GENE GPR12 NULL G protein-coupled receptor 12 EMBV3_14732 GGAAGAGCCTTGATGTTATTGGAGCTGTGTATGAGAAAGCTTGTGGCTGTGATCCTTCCC Gene GeneID:407767|HMGCS1:XM_002696363:39_cdna Constitutive 3 NULL GeneID:407767 20 GENE HMGCS1 NULL 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) EMBV3_13713 GTGGATGGCAGGAGGTGTCAGCGCAGCCTGGAATTAGCTTTGAGGACCTTCATGACATTA Gene GeneID:508208|LATS2:XM_002691865:176_cdna Constitutive 2 NULL GeneID:508208 12 GENE LATS2 NULL LATS, large tumor suppressor, homolog 2 (Drosophila) EMBV3_11299 GAACATGTAAAACCGTTTGGCGGCACAAGGTGGACTTTGTTGCCATCCTTGAGATGAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38083 CCCCTGGTTGCCCAGGCGATGATGAAGGAATCCAGCAAATTTTATCTGCCCTTTCAAGAG Gene BVV0102_137532 + 0 NULL GK000005.2:50711303-50861333 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27978 CCACAAGATGCCCACCCTGGTGACCCCTGTGAGCTGGACAGTCCAGGAACCCAGGAGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28409 CCCTGGATTCGAGAGCTGGTCCTAGGGTCAGACGCGGAGGCCATGCTGCTTGTATCCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04388 AAAGAGGAGAAGGATATTCCTGGACTCATTGATACTACAGTGCCTCGTCACCTGGGTCCC Gene GeneID:100300693|LOC100300693:XR_084120:41_cdna Constitutive 0 NULL GeneID:100300693 X PSEUDO LOC100300693 NULL similar to ribosomal protein S6 EMBV3_04062 AGAATGCCCAGTTCTCTGAACTCCAAGTGGAACAACAGCCCCCTCCCATCAAGTGGTTAC Gene GeneID:506952|METTL7B:XM_002687586:659_cdna Constitutive 0 NULL GeneID:506952 5 GENE METTL7B NULL similar to DILV594 EMBV3_11272 CGTAACGGTCAGTGATATTAGAAACCACACAGAGCCCAGCATGGAGCACTTGCTGAATAA Gene GeneID:613723|PPBP:XM_002688351:142_cdna UTR3_Alt 1 NULL GeneID:613723 6 GENE PPBP NULL pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) EMBV3_21238 AGCCTCCGAGCCACATGGGCATCTTCCTGGATTTTGAAGCTGGAGAGCTGGCCTTCTACA Gene GeneID:618634|TRIM17:NM_001105011:10_cdna Constitutive 0 NULL GeneID:618634 7 GENE TRIM17 MGC134518 tripartite motif-containing 17 EMBV3_10503 TTCGCGGCCTCCCACAGCCTTTGTCCTGCAGATGACGCACTTGCCAACTCAGATTTTTAA Gene GeneID:507207|SMPD4:XM_002694648:157_cdna Constitutive 0 NULL GeneID:507207 17 GENE SMPD4 NULL sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) EMBV3_02432 TTTCACACGACTTGGACAGATCTACCAGTCCTGGCGGTGGGGTCAAGCCCGCAGAGGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29725 GGCCCAATGTTTTAAGCCAAGAAGGCCCTAAGATGGATGGGAGAGGATGGTCTCTAGGCT Gene GeneID:540926|SCMH1:XM_002686454:473_cdna Constitutive 0 NULL GeneID:540926 3 GENE SCMH1 NULL sex comb on midleg homolog 1 (Drosophila) EMBV3_32615 TGTGAAAGACCATGAAGAGTGAATGTCGGAGGACTTGCTGCTGAGAGGTGCTGTGAAAGC Gene BVV0102_128293 + 0 NULL GK000008.2:85579684-85621884 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226082 TCONS_00226085 TCONS_00226083 TCONS_00228537 TCONS_00226078 TCONS_00226086 2 XLOC_137918 XLOC_138514 Coding TCONS_00226082 XLOC_137918 Coding Coding CENPP 8:85382817-85621941 j TSS169115 3527 2 TCONS_00226082_2 283 6 0.985275360379386 5.05617239065807e-13 0.000308246167635492 0.000235233148233216 3.39388827231361e-18 0.000272489348363717 1.62547302763773e-20 0.000234333128066736 1.69691136560111e-07 7.6078423864624e-25 2.65087861980992e-07 0.000102682889236777 9.28738044761282e-09 1.65339655691381e-07 2.96292443118849e-14 1.6518104937004e-13 0.00205290305156972 2.70026824169359e-21 0.000699594572947143 0.000833790687930869 8.39435033932304e-08 0.000184315691129927 7.77464521300587e-35 0.000350016566766602 0.000843373200276339 6.62398711346219e-07 5.36709567226941e-05 8.19609978728612e-05 4.34216654020398e-05 0.000124663431907519 4.69838763625101e-16 XM_599340.3 LOC521083 PREDICTED: Bos taurus inositol-pentakisphosphate 2-kinase-like (LOC521083), mRNA. 0.0 4497 100.00 0.706549475474908 NM_022755.5 IPPK Homo sapiens inositol 1,3,4,5,6-pentakisphosphate 2-kinase (IPPK), 0.0 899 75.02 0.387014459880919 TCONS_00226082_2 sp|Q6IPU0|CENPP_HUMAN CENPP_HUMAN Centromere protein P; 1e-70 223 47.22 0.795053003533569 1 coding 0 1 1 1 0.125116718345736 0.731987546397002 0.0367819226968056 0.542483954769232 CGCGGAACCGCCTCTTCCGTGACTGGGGCTCCAAGCCGCCATCAGGTCGGGGTGGGTAGCTGCGCCGTTGGGCCTCGAGAGGGATTTCAGCTCTCTTGACGCGTAAGGACTGCTGGAGGACAGCTGTGGAAAAGTGCGCAGGGATGGCAACTAGCCGGAGACACTTGCGGGACCGAGTTATAGGCGCGGGAATTGCGCATGGTTCCCTTGCCTCCCCCGCCGAGTTCCAGAATGGTTCGCTCCAGGAGCGCGCGAGGCTTGAAGAGCCAGACCTGGCGCGCCCAAGTCGGGGAGCTTCACGTCAGCACAGCTCCATGAATTCCCAGCGGGCAAAAGCCCGCGCCTTGGAAGCCGAGATCGCTGCCTTGAGGCGGGCGTGCATAGAGACACAGGCGCCCGGGGACGACGACTCTCAAGTTCGGAAATCATTTCAAGAAACACACCAATCAAATTCTGAAGAATGGGGATTGTCAAAAGATCTGAGAAGTCATCTTGGAAGTTTAGAATCTGAACTTCAATTTCTAAGTAGACTTACTGGTATCAGTATAAGAAATTACTGCAAGAACACAGAAGACCTAACTAACACTGAGATGGCAGAAAAGAGTATTAAAAAAGTTTTGCAGAGACACAGATTATCAGGAAATTGCCACATGATTACGTTTCAGCTTGAATTTCAGATTCTGGAAATCCAGGAAAAGTACCCAGAAGCTGTGCAGCTCTCAGAGGGGGCCTCCTCCAGCTGCATGGGCATTAGGAACCCCAGTCAACCTGGATTTGAACTAGTCATTGTTTGGAGGATACAAATAGATGAAGAAGGGAAGGTTTTGCCAAAGCTGGATCTTCTCACCAAAGTGCCGTTGCGAGCCCTGGAACTGGACAAGAACAGAGTCATAGAAACTGCTCCTCTCAGCTTCCGAACCCTACTGGGCGTGCTGGGCATTGAAGCCACTCTAGAAAGCCTGATTAAATCATTTTGCACAGAGGAAAGCAGCTAATTCCCAAACAGTGAACAACTACACGTAGGAGTAAGATGCTGCACCTGGAGGTGTGTGATTTTATTGAATATAAACATTTGCTCTTTTCCACTTAGAAACCTTACCTTTAGAACATGTTTATGCAATTATGGCACATTATATATAAGTTGTCAGGACATGAAAAATAAATACAGTTATTTAAATTCAAAATACCAAACAAGTGACACATATAGTGTATTTTTAAAAGTAAACTCAACATCCGAGAAAGTACATAAGTGGCTATCCATCCTGGGATATGGGGAGCCACCATGCCCCTACCTTGGTATGAATCTAAGGGCAGAGGCGGCACCATCTCAAAGGCTGGCCCTCCTCCTACCATCCACCACTGAAGGACTCCTGGAGGGCTTACCAGTGCAGCCTCATTCTTTTACATTCCTCAGACACCCCAGGGGAGCCACACCACCCTCCTCACCTCCTGGCTCTAGAAGCAGCACTGGAGGCTTTCACAGCACCTCTCAGCAGCAAGTCCTCCGACATTCACTCTTCATGGTCTTTCACAAAAAAGTAGAGTGGTTAACATTAACAAATGCAGTAAGACAGCAAACACGGCATTGTCCCTTCACACAGGGCCTTAGCCCCCCGGCCCCTCTGCACAGAAGAAACAGTGTCTTCATTAAAGTCCCCCAGAGTCCTAAGTGCTGCACTGACCTGAGTCGCCAGTTTAAAGTAGAATGGGTGAAAACACTGTTTCCATCAAATGAAAGCCTCAGGGAAGGGGCTGAGGTGGAGTGTGAGAAGTGCAAAGGGTTGAGTCAAGACCCTCTAGCAAGACATACTCATCTTTAATTTTTTTCCCTCAAATAGAGGGTGATTGTTTTCAGACTGTTCACTCCAGTCAGAATAGGCAACAGGAGGCTGCCCAGCCTACCTCCTTGAGGGGCTGGGGTTTCAGAGCTCCACACACAAGAGATTCAGGATCCCCTGCATACCCTGGTGCTGGGCAAGACCATCCTCACCCCAGGCCAGCAACAAGGAACAACCTCAGGCCAAAACAACTCTGGCAGCTACCTACTTCCATACACTCTGGAGCCTGCAACTTGACCATGAGAACAGGGCTCCATGCACACCCCTATGTGTGGAATCTCCAAAGCCCTGTACCCAGCATCCCACATGAATGAGAGGCATGTGTTATTTGAGTATCTTTTTGAACCTCTGAGTGAAGAAGTAAGAAGTAAATGGTAGGACAGGACTGAAGAATAAATTCTAGAAGAGCTGGCTTGATTCAAATAAGCATAATTCTCAATTTATCACAAAATTCCCCACAAAAATTATAATCAGCAAAATATTCTCATTTTTTGTATAGTATTTTCATACAATCTCATGGTTTCACTATTATATTACAATAAGCCTTCATTAGTCCCTCAAAATGATGATATAAATAATCTATACAACCTACCATAGAATAAAAAACTGAAGCCAAGATTCCCAACAGTTTTCATAGCAGCTGGGCACGCTTTTGTGACCCCAACAAGAACCCTCTTGGTGCCAGCCAGGCGTCGCTCGTCATGCAGAAGCAGGGCTGTGGGCAGCCCCGATGGGGAGGTGGTCCAGAATTACTCAAGGCCACCAACACCACACATCTTAGTGAAACCCGAATCAGGATGCTGGCCCTGGCAGAAGTAGCTGAGGTTTCCCAAACATCCAAAAATGTCAGAACACAGAACTGGCAGACGCACAGGCACCCCACGACACCCACCCTGGGCATAGCAGCTCAGAGTTACAGCTCTGCTTTCAGCTTCCACAGCAGCAATTTCAGGTGGGAAAGGATACCTTGTTTCCCCTAAAGTTAAAGATAAAATCATTCAACACAAAATAGAAAGTCAGTGCTCGCATGAGTGGTGTCTACCCCTGCCCTGAGTCCCACGCTCCCTGCTGACCCTGAGCAGAGCAGTGGGTCCAGCACCTCCACACGGACTGTGAGTCCGCTGCTCAGAACTGACGTCCACATCAGCAACTCAGTGCTCTCCACAGCAGGGAACTACTAAACCTGCGCTGACACACGGCTTGTGTTGGAAGAGTGACCAGGTAACTCAGCTGGGAACGTTCCAGTAGTATCTGTGTTTTCTTCAAAGTCCAACTGTAAGGTGTATGTGACAATTCAAGTTTTCTATGTTAGGATTCTGGTGGTAGGAGATCCAAACCTGGGGTCTTATAAGGCTTTTTAGAGATTAGATGTGAACCCTGGGTGGAAAGGGAGAACTGCCCAGGGGGGCCTCCAGGGACACAGCACACTGCTGGGCTCATGTCCAACATTCCTTGTCCTGGAAGCTGTCTCTAATAGGGCATTCCATGTCTCCTAGAGGCAGTCCCACCTGAACAGGGCTTGAAAAGCAAAAACATTCACAGCCAGAAGTCACCCTACACAACAGAAAATAGCTCTATCATTCAACCTTCACATTCTGTGTTCAAGTTTCAAAGCCACTACAAGAAAAAAGGTTAGACCTTATGGAGAACTAACGTGCAATCTTCGCTTTCCTTGAACCTTGTCGACAT EMBV3_26642 CCCCAAAATGCTTACTTCTCAAGGGAGAAGACAATCAACAGATGCTAATCCATGATGCCC Gene BVV0102_137699 - 0 NULL GK000026.2:29697698-30690129 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36315 TCTTCCAGCTGCAGCAGTCAGGCCAGCTCTACACCTTCAAAGCGGAAAGCGAGGAGCTGA Gene GeneID:512593|FGD2:NM_001075570:26_cdna Constitutive 1 NULL GeneID:512593 23 GENE FGD2 NULL FYVE, RhoGEF and PH domain containing 2 EMBV3_34555 ATGCAGATCTGGACAGAGAAGCAGAATTCTCTAGAGCAGAAACGGAATCAGTGCCTAAGG Gene GeneID:782074|LOC782074:XM_002687301:227_cdna Constitutive 0 NULL GeneID:782074 5 GENE LOC782074 NULL similar to Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut-reactive urinary mucin) (PUM) (B EMBV3_17714 TATTTTGCATATAAGCCATAACCTGCTCTCCTGGCGCAGGCTACGGGGAGGCCCCAAGGT Gene BVV0102_075437 + 0 NULL GK000014.2:2893979-2914965 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28455 TGACATAAGAAAGCGCAAAAAAGGTGCTTCAAATTTTCCATCAGGTAGTTATGAGTGCAC Gene GeneID:511003|CXHXORF23:NM_001083665:2_cdna UTR3_Alt 5 NULL GeneID:511003 X GENE CXHXORF23 NULL chromosome X open reading frame 23 ortholog EMBV3_27870 CAAAAGGCAGAAAAGGCAGAATTAAGGACCAGTTTAAACATACCAATCAATGTCTAGGAC Gene GeneID:525136|WDR51B:NM_001099031:38_cdna Constitutive 4 NULL GeneID:525136 5 GENE WDR51B MGC139093 WD repeat domain 51B EMBV3_34247 TTAGGAAGAGCAAACCATCACAGCCTTTACTACCCAATGTGTCCCCCATGCTGGGCATCC Gene GeneID:535872|SLC16A2:XM_002699994:96_cdna Constitutive 2 NULL GeneID:535872 X GENE SLC16A2 MCT8 solute carrier family 16, member 2 (monocarboxylic acid transporter 8) EMBV3_30081 CTACTCAGACCCCTTCGTCCGCCTTTTCCTGCATCCCAACACAGGGAGGAAATCGAAATA Gene GeneID:618318|DOC2G:NM_001076499:134_cdna Constitutive 0 NULL GeneID:618318 29 GENE DOC2G NULL double C2, gamma EMBV3_06071 ATACTGAGTGTGCCGGAGAGGTGATCGAGAGGAACGGACAGAAGCTCAAGCTCTTCTATG Gene GeneID:533000|GMPR:NM_001075977:119_cdna Constitutive 1 NULL GeneID:533000 23 GENE GMPR MGC143402 guanosine monophosphate reductase EMBV3_36523 AGTTGCTCAGTCATGTCCGACTCTCTGCAACCCCAAATAGGCAAGGTACCCAGTGAAAAC Gene GeneID:513155|MMD:NM_001075601:17_cdna Constitutive 0 NULL GeneID:513155 19 GENE MMD MGC139475 monocyte to macrophage differentiation-associated EMBV3_38284 CAGTAACGACACGGGACAGTACACCTGCGTCTATCACACCTACCCTGACGGGATTTACAA Gene GeneID:100140801|LOC100140801:XM_002684782:8_cdna Constitutive 0 NULL GeneID:100140801 1 GENE LOC100140801 NULL similar to V-set and transmembrane domain-containing protein 3 precursor (V-set and immunoglobulin domain-containing protein 9) EMBV3_16961 CAGTCCTTCTCATGGTGTGCTAATCCTTCTGCAGTGGGTACAGTTTGTGAAGCTGTCAGC Gene GeneID:530661|SLC7A6:NM_001075937:327_cdna UTR3_Alt 2 NULL GeneID:530661 18 GENE SLC7A6 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 EMBV3_24252 CGGGTGGACCGTATCATCCTGCTCTTTGACGCCCACCTACGACGAGATCTTCTACACGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06060 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42981 GTCAGCATGATTTCCAGGCTCCGTACCTTCTACACGGAAAATACGTCAAAGAGCAGGAGC Gene GeneID:100295169|LOC100295169:XM_002685734:465_cdna Constitutive 0 NULL GeneID:100295169 2 GENE LOC100295169 NULL hypothetical protein LOC100295169 EMBV3_21055 TTAAGGTGGTTGCTGAGGCAGACGCTGTTGAACTTTGTGGCGCTCTGAAGAACATTGTGG Gene GeneID:614138|LOC614138:XM_002690077:2_cdna Constitutive 0 NULL GeneID:614138 9 GENE LOC614138 NULL similar to glycerol-3-phosphate dehydrogenase 1-like EMBV3_17493 CCGACATGCCCGTGTTAGCAGGTTAGTTTTGGAACACTTAGTTGGGTGGGAAAAGTGAAC Gene GeneID:523110|NSG1:NM_001077957:13_cdna UTR3_Alt 1 NULL GeneID:523110 6 GENE NSG1 D4S234E neuron specific gene family member 1 EMBV3_00316 TGGTGCTGGGCAAGACCAACCTCAGCGAATGGGCCAACTTCCGCGGCAATGATTCGATCT Gene GeneID:100300687|LOC100300687:XM_002683920:2_cdna Constitutive 0 NULL GeneID:100300687 Un GENE LOC100300687 NULL hypothetical LOC100300687 EMBV3_02911 GAGTGGGATCTGTGGAGAGGGTGAGAAGAGGCAGGCTACAATAAGGACAAACTTGACTCA Gene BVV0101_055855 - 0 NULL GK000001.2:97194666-97220099 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19224 CACTCAGAGGGCTCGCTGGTCGTTCTTACATGCACAAGACCCCTTTCCACAAGCTGTCCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_19969 TGGTACGTCCAGCATCTCAACAAAGCTCCTCAACTCCTCCTGAAGGGCTTAACAGCAGAC Gene GeneID:787105|LOC787105:XM_002690635:27_cdna Constitutive 0 NULL GeneID:787105 10 GENE LOC787105 NULL similar to LOC784904 protein EMBV3_27112 GACGTTCACACAACATTGTCCAGCGAACTTTCACCGGCCGCCCCGACTGTCACGGCTCAT Gene GeneID:618652|LOC618652:XM_002691719:105_cdna Constitutive 0 NULL GeneID:618652 11 GENE LOC618652 NULL similar to 1A6/DRIM (down-regulated in metastasis) interacting protein EMBV3_13447 CAAGACTTAAAGGATCCTAGCTGTTCAGATGGCTGGACAATGTAGTCTAGGATTGCTAAA Gene BVV0102_227579 - 1 EMBV3_39326 GK000001.2:28612241-28659455 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003063 TCONS_00003064 1 XLOC_000777 Coding TCONS_00003063 XLOC_000777 Coding Coding GBE1 1:28657363-28972849 = TSS1595 4479 1 TCONS_00003063_3 669 0.042866711319491 17 0.985856696831862 0.000152369795397571 0.000334608304785515 9.19392516828476e-05 5.59460508215653e-05 0.000174177935843642 7.11415805772896e-05 0.000131705257471791 0.000113316688748595 0.000230692390326278 1.61006287444948e-08 1.008666955341e-11 9.41620100141697e-06 8.73987091724427e-09 1.40924440097672e-05 4.86805022539989e-08 0.0022200939988552 1.30855026678419e-07 0.000716912214990446 0.000149901491306734 0.000246982797466411 8.15355103667081e-08 0.000275776689849973 0.000621506806386373 0.00130210175948202 0.000211148504740552 0.000101509113713576 8.8012566098466e-08 0.000122400983024759 5.17932390213172e-05 0.000112216776606918 NM_001122729.1 GBE1 Bos taurus glucan (1,4-alpha-), branching enzyme 1 (GBE1), mRNA. 0.0 2818 99.75 0.350747934806877 NM_000158.3 GBE1 Homo sapiens glucan (1,4-alpha-), branching enzyme 1 (GBE1), mRNA. 0.0 2531 84.81 0.506363027461487 TCONS_00003063_3 sp|Q04446|GLGB_HUMAN GLGB_HUMAN 1,4-alpha-glucan-branching enzyme; 0.0 1236 85.39 0.998505231689088 3 coding 0 0 0 0 -0.0315005862841344 0.861114424053432 0.0297371542734117 0.554272963049735 AGAATAAGGTCAGGGTGGGTCAAGATCTGCCAGGACCCCCGGCGGAGCCGCTGAGGGAGGAAAGGGCAGGTCTCCACGGCCTCCAGGTGGGAGCCGCGTGAGTAGGCGGAGGGGCCTGTCTGGGCGCCTCCTCCCTTCGCGGGACGTGCGTCTGGGGATCACTCCGGCCCCGCTCCTCCCCGCCGGCGGGGGGAGGAAGGGGGACAGGGGGCCGTCCCATGCGGCTATAAAGAGCCCTGGGCCTCCACAGTTCGCCTCGGCTCGCCCGGGCGTCCTCTGGCTCCGCTCTCGCCGCTTTCTTCCCGGCTAAAGCTCCCGCGGCCGCTCCGGCTCCACTCGACCCTCTCGGGCCTCGGCTGCTCGGGCTGCGGCGGAAGATGGCGGCTCCGGCAGGTCTCCCGGCTGAGGCGGCTGGGGCCGAATGCTCTGAGGAGGCGCTAGCCGCCGCTCTGGCGGACGTGCCCGAACTAGCCCGCCTTCTAGAGACAGACCCGTACCTGAAGCCCTACGCTCCGGACTTCCAGCGCAGGTATAAGCGGTTTAACCAGACTTTGACCGACATTGGAGAGAATGAAGGTGGTATTGATAGGTTTTCCAGAGGTTATGAATCATTTGGCGTCCACAGATGCGCTGATGGTGGTTTATACTGCAAAGAATGGGCCCCAGGAGCTGAAGGAGTTTTTCTTACTGGAGACTTCAATGATTGGAACCCATTTTCATACCCATATAAAAAACTGGATTATGGAAAATGGGAGCTGTATATCCCACCAAAGCAAAATAGATCTGTCTTAGTACCTCATGGATCCAAACTAAAGCCAGAATACTGGTATAAATTTAAACATTCCAAACCAAAGAAGCCAAAAGGTCTACGAATTTATGAATCTCACGTGGGAATTTCTTCCTATGAAGGAAAAATAGCTTCTTATAAACATTTTACATGCAATGTACTACCAAGAATCAAAGACCTTGGATATAATTGCATTCAGTTGATGGCGATCATGGAACATGCTTACTATGCCAGTTTTGGTTACCAAATCACAAGCTTCTTTGCAGCTTCAAGCCGTTATGGAACTCCTGAAGAGCTGAAAGAACTGGTTGATACAGCCCATTCCATGGGTATTACAGTGCTCTTAGATGTGGTACACAGCCATGCGTCAAAAAATTCAGAAGATGGACTAAATATGTTTGACGGGACTGAATCCTGTTACTTTCATTATGGACCTAGAGGGACTCATCTTCTATGGGATAGTCGGTTATTTGCCTACGCCAGCTGGGAAGTTTTAAGATTTCTTCTGTCAAACATAAGATGGTGGTTGGAAGAGTATGGCTTTGATGGATTTCGTTTTGACGGTGTTACATCAATGCTCTATCATCACCATGGAATAGGTGAGAATTTTTCAGGTGATTACCATGAGTATTTTGGACTACAAGTAGATGAAGATGCTTTGACTTACATCATGTTGGCAAATCATTTGGTTCACACACTGTATCCAGATTCTATAACAATAGCTGAGGATGTATCCGGAATGCCAGCTCTATGTTCTCCAATTTCCCAGGGAGGGGGTGGTTTTGACTATCGATTGGCTATGGCAATTCCAGATAAATGGATCCAGTTACTGAAAGAATATAAAGATGAAGATTGGAACATGGGGAATATAGTGTATACACTCACAAACCGACGCTACCTTGAAAAGTGCATTGCCTACGCAGAGAGCCATGATCAGGCACTTGTTGGGGATAAGACGTTGGCATTTTGGTTGATGGATGCTGAAATGTATACCAACATGAGCGTTCTGACCCCATTTACTCCCGTTATTGATCGTGGAATACAGCTTCATAAGATGATTCGACTCATTACTCACGCACTCGGTGGAGAGGGGTATCTCAATTTCATGGGTAATGAATTTGGGCATCCTGAATGGTTAGACTTCCCAAGAAAAGGAAATAATGAGAGCTACCATTATGCACGAAGGCAGTTTCATTTAACTGATGATGACCTTCTTCGCTATAAGTTCCTAAATAACTTTGACAGGGATATGAATAAATTGGAAGAAAGATGTGGTTGGCTTTCAGCTCCACAGGCCCATGTGAGTGAAAAGCATGAAGACAATAAGATCATTGCTTTTGAGAGAGCTAGTCTTCTTTTCATCTTCAACTTTCATCCAAGCAAGAGCTATACTGATTACCGAGTTGGAACAACATTGCCAGGAAAGTACAAAATTGTGCTCGATTCAGATGCAGCAGAATACGGAGGACACAAGAGACTGGACCACAATACCGAATTCTTCTCTGAACCTTTTGAACATAATAACTGTCCCTGTTCTCTTTTGGTGTACATTCCAAACCGAGTGGCCCTCATCCTTCGCAATGTGGACCTGCCCAACTGAAGAGATCTGATTTCAGCTCCCGCAGAGGAAGACCTGTGCTTTGTTTTCCCACGCTCACTGTCCCAGAACTTGTAATGTGTAAGCTTTTCAAAATATATTTGTCTAGACGAAATGTCCGATGTCTGAAATTCAGTATTGGTTTATGAAAATGAATGTCAAACTTTATTCTTTAAAGAGTAGAAGGGGACATGTTTTTGAAATTTTAGCAATCCTAGACTACATTGTCCAGCCATCTGAACAGCTAGGATCCTTTAAGTCTTGTATATCATGCCTTTAAAGAATTTTGCCTTACAGCCCAATTATTTAATCCTTTTAAGTTCAAGTTTGAATCATGTATCCATGTTTGATTATTTCTGTTGAATGTATACAGTATTTTTTTCTAAGGCAAATATTTGGTGACTTTATTTGTTCTGGTTATCTCTTGGTCTAAATTACAAGACACTAGAGATTGTTACTTTCCTTTTTCAAAGTGTGTTTAGAAATACTGTAATAAACATATAGTAATATATAAAACAAAGAATTGTGTCAAATATAAAAGTTGTTGCTTATGAACCCATCCATGCCTTATTTTGCATAAGTTTTATCTTGTCTCTATTTCATTTAATATCTTGGTAGATGCTAGTATCTTCATTTCTGAAGGCTTGACTTGGTAATTGTAACATTTCAGAAAACATCTTTTACTTTCAACCAATAAAAAAAAATATTGCACAGTTGTCTCTGCTAATGTTTATTTTACTGTGATGTTATGGAATTTTTTTAGAGTGAAATTTAAATGCCTATCTCAGCTCTGAGACCTTCCTCACACTTATGCACATATGCATGATGGACTAGGTGTGGGAGTTAATACTTTTTTTTTCTTTAGGTACTATTTTGTAACTTGAAATTATATCAACCAACTCAGATATCTAAGCTCCTCTCCAACTCTAAACCTGAACACTTTTAGAAGCTGAGTTAACTGCTTCAACAGTTAATAGTGAGATACTCCATCATGAAATTGCCCCTTGGTATATGAAATAGCAGGCCACAAATGTGTAATCACTGATATGTAATCCATTTGTAACTGAGAAATTATGATGGGGTCGCTAGGAGTCGGGCACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAGTGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCGGGGAAAGAGGAGCCTAGTGGCCTGCTATCTATGGGGTCGCACAGAGTCGGACACAACTGAAGCGACTTAGCAGCAGCAGCAGCATGAAACATAAAGTATTTGTCACCTTTTTAAAGATTTAATATTTTCCTTTACGTTAATACTGACTGCTGCTTTGTTTTTAGCCTGATTATAGTGACTAATAAGGAGTACATGAAAGTCTTTCTCTTAAAAACTGGTTTAGTAATGGAAGAGATTAGCAAAAGAGACTTCTTTTATAGCTAAACCTGTGTCTTAACCATCTTCTTTATCATTTGAGTAAAACCTTAAATCTAGGGCTGACATGTGTAATTTGCTTTAATTTCAAAGTAGAGTAATAGTTTGATTTCCTGACAGCGAAGCCAGCTGATGGTGATACACCCTAGAAAACAACTGAACGAAAGCCTCCTGTAAATGCTTTTCCCCTTTCAGATATGTTATTAACATCTTAGTGCTGCCACGATCCTGTACCATGCCTGTTACTGATAATAACATAATGTACAACCCTGATGTTTTGTGTTCTAGCTTATAATTTCTTACCTTTCTTTACATTTCTTATGTATAAAGATATATGCTAATTTTCTATCATAGCTCTTTAAAAAATGATAAGGAATTACTTCACACCTAGAACTTGTTTTTTTTTCCCCCCTTCGACCTCTGTGGAAAATCATAAAGACCAGTGCAGTTATATGCTATATTTTCATTATGTTGATTGACCTTACTAATACGGTCTTTAGAATTCACAGTGTAAAGTTCAAATTTATACCTGATATAATGTAAGTTAATTGCCTTTGTCAAGTTTTTCCCCACAAGAAGGATGATAAATAGATATTGCTAGGTGTGGAAAATAAAAATATATGCAAATAAATAAAATATTGAGTCCAAAAT EMBV3_31592 AAGTCTGTCTGAGGGCAATAGCTAAGGGTGGAAGAAAACCCGGAAGTTCCTGTTGAAGCC Gene GeneID:518308|PRUNE2:NM_001105382:32_cdna UTR3_Alt 2 NULL GeneID:518308 8 GENE PRUNE2 MGC166262 prune homolog 2 (Drosophila) EMBV3_21846 TGCACTTGTAGGGGAGTGCCTGGGAAGCTGTTCCTTTTGGCCGACTACTTCCTGGTGCCT Gene GeneID:100313464|MIR2382:NR_030807:22_cdna Constitutive 0 NULL GeneID:100313464 25 GENE MIR2382 bta-mir-2382 microRNA mir-2382 EMBV3_03541 CGAGACCAGCTCATCTACCTGCTGGAGCAGGCTGTGCTTCCTGGTCAGACCTCGCATCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42989 AGAAGCCTTACCACTGCGAGGCCTGCCAGAAGGACTTTCTGTTCACTCCCACGGAAATCC Gene GeneID:506965|DHX34:XM_002695107:577_cdna Constitutive 0 NULL GeneID:506965 18 GENE DHX34 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 34 EMBV3_28723 GATTATTCAGCTCTTTACATCCAGTCAGCTCCAACTTTCCTCCAGCGGCTATGATTGCTG Gene BVV0102_334306 + 0 NULL GK000007.2:15485018-15511710 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39428 TTGAGAGGTTGGCTCTCCCTGCCACCACCGGCCTCAGGTTTTTCTTAACTTGCTTTGCAT Gene GeneID:515661|SPSB3:NM_001034506:180_cdna Constitutive 0 NULL GeneID:515661 25 GENE SPSB3 MGC128873 splA/ryanodine receptor domain and SOCS box containing 3 EMBV3_14367 GATCTTTCGGACCCTGGGAACCCCAGATGAGCAAATGCTGCACTACGACCCTAACAAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14274 TCATTGAGATCATCGAGGTCTTCTTCATTGACTCCCTCTCCATCATTGCCCGCCACCAGT Gene GeneID:617802|SCNN1G:XM_002697996:85_cdna Constitutive 0 NULL GeneID:617802 25 GENE SCNN1G NULL sodium channel, nonvoltage-gated 1, gamma EMBV3_31469 GCCCTGGAAGTGTACAAGCTGTCCCTGGAGATTGAAATCCTTCAGACAAATAAACTAAAG Gene GeneID:281651|C4BPA:NM_174252:13_cdna Constitutive 0 NULL GeneID:281651 16 GENE C4BPA MGC128750 complement component 4 binding protein, alpha EMBV3_13613 CTTTTGGGGCCAGAACTCCTTTGCCAGCGTGGATTCCTCAAGTTGGGACTTCGTAACTAA Gene GeneID:533303|ALKBH5:XM_002695824:194_cdna Constitutive 0 NULL GeneID:533303 19 GENE ALKBH5 NULL alkB, alkylation repair homolog 5 (E. coli) EMBV3_06509 TGCCAAGGGCGTCGGCTTCCACGGTCGCGGCGGCTTCAAGCTCAAGCCCTACGTGAACTA Variant GeneID:506521|MRPL41:NM_001099365:62_cdna 241^297 1 EMBV3_42795 GeneID:506521 11 GENE MRPL41 NULL mitochondrial ribosomal protein L41 EMBV3_13025 GTAGTAGTGGCATCTTACACCACCATTCTCACCACCGTTCTCAGGATCCCTTCTTCTCAG Gene GeneID:520257|LOC520257:XM_002685938:98_cdna Constitutive 0 NULL GeneID:520257 3 GENE LOC520257 NULL similar to Olfactory receptor 6Y1 (Olfactory receptor OR1-11) EMBV3_38448 CCCTCTGCGCTCCTGCTTCTGCCTCCCCATCTTTATCACCAGGAAGAACCGCCAGGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07653 CCCACGCACCTATGGTCAGTTAATCTGTGACAAAGGCAAGACTACACAATGTTGAAAAGA Gene BVT0102_196277 + 0 NULL GK000026.2:31849702-31870224 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20222 CAGAGGTGGCTCTGTACTGGAGACATTGGGGAGTTTGACCCTGATGGTTGTTTGAAGATC Gene GeneID:100138312|ACSL3:XM_002685630:313_cdna UTR3_Alt 2 NULL GeneID:100138312 2 GENE ACSL3 NULL acyl-CoA synthetase long-chain family member 3 EMBV3_31337 GGCTACAAGCCCAACAGGGTGTTTTTCCTGAACGTGCCATTCGATTCTGTCATTGAGCGG Gene GeneID:615606|LOC615606:XM_002691652:380_cdna Constitutive 3 NULL GeneID:615606 11 GENE LOC615606 NULL similar to Putative adenylate kinase-like protein C9orf98 homolog EMBV3_31280 GGAAGACGCTACTCCCGTCATAAACTATGACCTTTTATACGCTATCTCCAAGCTAGGGCC Gene GeneID:539640|RCAN1:NM_001034679:49_cdna UTR3_Alt 2 NULL GeneID:539640 1 GENE RCAN1 DSCR1 MGC128596 regulator of calcineurin 1 EMBV3_17814 TGACAGCCTGGGCGGAAAAGAGGAAAAGCGGGAAGAGACAGAAGAGGAGAAGCAGAAAGA Gene GeneID:317660|HOXC6:XM_002687233:94_cdna Constitutive 0 NULL GeneID:317660 5 GENE HOXC6 NULL homeobox C6 EMBV3_38498 TCTATGAGGAGGAGCAGGTGGAACGTATTGGTGACATAGAGGAACGCGGCAAGATCCTGG Gene GeneID:282044|RPH3A:NM_174454:12_cdna Constitutive 0 NULL GeneID:282044 17 GENE RPH3A NULL rabphilin 3A homolog (mouse) EMBV3_43643 TCTGAATTGGGCTCAAGGAAACGCACTCTCTACACCAAAATGTACTGCAACCGACTCCCC Gene BVT0101_015727 + 0 NULL GK000012.2:90033353-90125056 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035975 1 XLOC_021046 Coding TCONS_00035975 XLOC_021046 Coding Coding SOX1 12:90031871-90036397 o TSS26282 4526 2 TCONS_00035975_2 369 1 0 0.000318390282171377 0.000500644581206525 0.000408005674743752 0.000213750328227136 0.000106630477026212 0.000172122080873462 6.96956653004465e-05 0.000129637636736154 0.000182174310084011 5.38175005165455e-05 7.39070215465719e-13 8.38131273295099e-06 5.12447540352254e-06 5.17411765895662e-05 1.43442463468124e-05 0 0 5.54374456198343e-06 4.18289876786694e-05 0.000117209058348939 1.49789549385831e-05 5.20637151727105e-12 4.37302742432946e-12 4.83799045402754e-06 0.000112438386448906 9.07211880445032e-05 0.000134777436447266 7.96975550104296e-12 1.42699772141811e-06 3.57551700531263e-12 XM_005214013.1 SOX1 PREDICTED: Bos taurus SRY (sex determining region Y)-box 1 (SOX1), 0.0 5223 100.00 0.639637649138312 NM_005986.2 SOX1 Homo sapiens SRY (sex determining region Y)-box 1 (SOX1), mRNA. 0.0 1775 91.18 0.258285461776403 TCONS_00035975_2 sp|O00570|SOX1_HUMAN SOX1_HUMAN Transcription factor SOX-1; 1e-155 448 90.28 0.997289972899729 3 coding 0 0 0 0 0.0962528304836019 0.374178819720651 0.017245587629325 0.722746310055732 CCGAGCCGGGCCCCGCGCACCGCTGCGCCCCGGAAAGTGGAGCTGCAACTTGGCCGCGCCTGCACCTGTTGGCACCGCGCCGCCGAGGGCGACCCGGCTGCGACGACGGCGACCCCGGCCCTCGGCCTCTTCGGCAAGTGGTTGGCGCTTCAGAGAAACTTTCCCCCCGTGAGCCGGACCGGCGCTGAGTGCGTGTGTCCTTGCCTCTTTTGTGTCGTTGTCGCCTCCGCCTCTCCGCACTCTTCTCTCCGCCGGGACCTCACGCCCCCGCCCGCGCCTCGCTCCGTCTGAGCCCCTCTCCATCCCCCTCCCCGGCCGTCTATGCGCCAGGCCCTCTCCGCGCGGCGCCGGTGAACCCGCGAGCCGCCCCGATGTACAGCATGATGATGGAGACCGACCTGCATTCGCCCGGCGGCGCCCAGGCGCCCACGAACCTGTCGGGCCCGGCCGGGGCGGGCGGGGGCGGCGGCGGCGGCGGCGGGGGCTCCAAGGCCAACCAGGACCGAGTCAAGCGGCCCATGAATGCCTTCATGGTGTGGTCCCGCGGTCAGCGGCGCAAGATGGCCCAGGAGAACCCCAAGATGCACAACTCGGAGATCAGCAAGCGCCTGGGCGCCGAGTGGAAGGTCATGTCCGAGGCCGAGAAGCGGCCGTTCATCGACGAGGCCAAGCGGCTGCGCGCGCTGCACATGAAGGAGCACCCGGATTACAAGTACCGGCCGCGGCGCAAGACCAAGACGCTGCTCAAGAAGGACAAGTACTCGCTGGCCGGCGGGCTGCTGGCGGCCGGTGCGGGCGGCGGCGCGGCCGTGGCCGTGGGCGTGGGCGCGGCGGCCGTGGGCCAGCGGCTCGAGAGCCCGGGAGGCGCGGCGGGAGGCGGCTACGCGCACGTCAACGGATGGGCCAACGGCGCCTACCCCGGCTCGGTGGCGGCGGCGGCGGCCGCCGCGGCCATGATGCAGGAGGCGCAGCTGGCCTACGGGCAGCACCCGGGCGCGGGCGGCGCGCACCCGCACGCGCACCCCGCGCACCCGCACGCGCACCACCCGCACGCGCACCCGCACAACCCGCAGCCCATGCACCGCTACGACATGGGCGCGCTGCAGTACAGCCCGATCTCCAACTCGCAGGGCTACATGAGCGCCTCGCCCTCGGGCTACGGCGGCCTCCCCTACGGCGCCGCGGGCGGCGCGCACCAGAACTCAGCCGTGGCGGCGGCGGCGGCAGCGGCGGCCGCGTCGTCGGGCGCCCTGGGCGCGCTGGGCTCGCTCGTCAAGTCGGAGCCGAGCGGCAGCCCGCCGGCCGCGGCGCACTCGCGGGCGCCGTGCCCCGGGGACCTGCGCGAGATGATCAGCATGTACTTGCCGGCCGGCGAGGGCGGCGACCCGGCGGCGGCGCAGAGCCGGCTGCACTCGCTGCCGCCGCACTACCAGGGCGCGGGCGCGGGCGCCAACGGCACGGTGCCCCTGACGCACATCTAGGGGCGCGGGCACCCCGCGGCCGTCCGGCCTCCGCGCAGACCTGTCCACGTTCTCCCGAAAAGGAAGACACTGGCGCTGCATGCCCGGCGCCGCCCAGCCCCCCGACCGCAAGCTCCTGGGGACCGCTCGGCGGGACGGTTGCGCGTCGGAGACTGAACTCCGGTGTTTTCTTGAGACTTTTTGTACAGTATTTATCATCCATCCGCGGAGGAGGCAGAAAGCGTCTTCTTTGCTCGAGGGGACACAGAAACCGAACCAAGCACGAGACGACTCCCAACTTTTCTACCCCACCGTGCTCCCGCTTTCATCCCGCATCGCCTCCTGACGGCGTCGGGTGCTGGCGGCGCGGGGAGTGGGTCTCATCTGTTAGCTGTGTAGGGACACGACGCCAAACACAAGTTTTGGTAGTCGTTACGGCTTTGGGGGGGGTCGGTTTGTTAATTTATACAAAGAGATTTCCCCCCACCCACCCCTTTCGGGCGGCAGCGTTATTCTGGGTTTTGTAAAACTTTCTGTATCTGAGCATTTTCATTTTTTTGGTTTGTTTTGTATTATTTCATGTAAATGCGTTGTGGAATTTTTATTTGCGGCGTCGCGGTGTGGGGAGGGGGATTCAGATTATGTACATAGTTTCCTTAAAGCCTTTCTTCTAAATACGAAAAAAAGAATCCCCCACCCTAAAAAAAAATTGCATCGAGCTTTGAGTCAATAAATTTAAGAGCGAGAAGTCCGTTTTTCCCTATAAATTTGAAACGTGCTGAATTTATAATCATGCTTTATGAGCTCAAGATACAATTAGTTAATCTGACGAAAGAGAAAGAAAAATTATCAGCATGAAATGAAACTGAGGGAAGCCCGGGGGAGAGGGCACGGTGTCCTTGGAGTTGCATTAAAGAGGAAGGGAGGGGAGTAAAAATCGATAGATTATTTTGTAGACTTCACACTGTCATTACGGAACGAGAAATAATTGCCAAAAAAAATAGTTTTATAGTCCGGCCTTGGGTGCGTAGTTTTTAACTGCAGGCAGATGCCGAGGGCTTTGCGATTCCTCCTTTCGAGCCTCTTTCTGCTGGCCCGGGACCTGTGCGCAGTTTGGTCCAAAGAAGGGAGGAGAAAAGACCCCAATGGCGGGACCAGGGCAAGGACGGACGACAAAGACACGGTGGGGGCGCCGGGGGCCCCAATTCCCCTGCAGTTAATGAGACAGCAAGTGGAATTTTCTGAATTGGGCTCAAGGAAACGCACTCTCTACACCAAAATGTACTGCAACCGACTCCCCTGTCTGTCCTCAGCCCCTCCCTCTGGTGTATTTCTCCTTGGAAAAGGACAAAATAGTTTTGTTGGGTTTTCACACACAAAACCGACCACTCCCGGATGCCCCGAGTGAATTGGGATGCAAGTTGCTAACCGATGTGAATGCAAAATGCGGTGTTTATTATTCCTGATGAGATCTGCGGTTGTTTGATGCTTTAATTTTTTTAATTATATTTTTTCTAGGTGTTTATTGGTACATTGCAGTTTTTTCTGGATTTTAAAGTTTTCTGTAAAACTTTGTCTTCAAGTAATCTGACAGCATTAAATATTGCATTTGAAAGTTATACTGTAGCAAATACGTTTTGACATTAGTCACAGCATAAAGATGAAAATTATATTTTTGAAAAGAACAAAGCCTTTGGTCAGATCGAAATACATTGATTTCATCAGCCCCTCATATTTTTCTCAACATTTTTTTTTTCTGGTCCTGGAATGAGCATAGACTGTCCATCCAAACGTGGGCCTGAGCTAGCAGGTTAATGAGAACCACGGTCAGCCTGCGCTAGAGAATAGCTTTAAGTAAAATGCTCACTTGACAATTGACATGTGTAATTTTTTTGGAGTCACTTTGATAATTTTGCTTCAACCACTCATTCCTTAAGGTGATTGCAGAAATTTCAAGAGCTACAGCAGTTGCTTCTTTCTAACAAGATAATAAAGTCTCCCTCTTTTTTCTTTTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTGCTTTAGCAATTTGATGTGTTTGGATACATAGGGACTGCTGGGCAGAACAGCATCTTAGATAGTGAGACAATCTGAAAATAAATGCCACACACAGTCTCCTCTGGGAGACACTTTGAGAAATTCTGTGATGCTCTGTGGACTCCCCAAGCGGTGGAAGGCGCAGGCCTCATCTGCTCTGAAATGTCCAGAGTTCAGTGGACTTCGCCTGGCTTTTTTGCAACATCTCCCTGCACCTGCTAAGGGGGCAGACAGACCTGGGGCTGTGTTCACATATAAACACATTTGTATCTTTGCTGGACTATCGGACACAACATTGTTAGTAATGTGGGATACATTGGAAATGTTTCTGACCACAAAAAGTTTAGCCCATCTCCTGGAAGGTGGACTTTAGTGTGGCATTTCCCCCTGTGGGCCTCATACCAAGCCAGCAGAGACAGTGACTGCCAGGTGGCCCGAGCCACGTTGTTAAAAACCCCCGGAAGATCTGAAAACAGGAATTCCTGAAATTCAGCAATTCTGTTTTGTTGAACAACGAGGAGAAAGCAAATAATTCTTTAATGATTCCATTTTAAAACAACGTGGGACAGGGGGAGTAGAAATTAGCCAGGATGCGTGTTTCAGGATTGAGGTCTTATCTCTCCAGCAGTGTTTCTTCGACTTCAGATCGTGGGGAGAATATTTCACAAGGCCCGGGAGCACCGTATTCAACCGCGAACTGCGCTCCTGCCAAGGCGCACTGGCCCTGTTCACGAACACGGCGTGGCCATCATGGTACTGCCACGGCCTCGTCCACGTCCAGATGGCACTCGGGGTGGGGGTCCTTCTGTGGCTTACTCCAGTTTCTGTGAAAACCGTGTGGAGACTGCCAACAGGACTCTGATGGTCTTGTGCAAAGTTTGCACAACTTCGTGCCTAGAGGACCCGCGAGCTCAGGAAGCGGCCCGTGCGCACTGCCGGCTTCTCCCGGCCCAGGCTAGAAGGGTTTGTTTGCTGGAGACATTTTCCCCTCGTTTCTGTAC TCONS_00035976 s 5' 0 TCONS_00035976 s 5' 0 EMBV3_09268 CCGATCCTGGAAGTGTCTGTGAGCTTCCATTAATAAGTTTAATTATAGCATTATGACTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14598 GTTCATCGGTAGAGGTTTGCCAAGAAAATTCAACCTCAGGAACTTCAGAAACAGCCCCTG Gene GeneID:534282|RNF145:NM_001102168:25_cdna Constitutive 2 NULL GeneID:534282 7 GENE RNF145 NULL ring finger protein 145 EMBV3_35536 ACCATCAGGGTTTCTGCTCCAGCACCTTAGGACCCAACCACATCCCAAACAGGGCAATAA Gene BVT0102_128980 + 1 EMBV3_00814 GK000029.2:8539178-8669605 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07168 GTGAGACCACTATCCGGTCTTCATTTCTACTGTTCATGCAGCCTCAGCATCACCTCCTAC Gene GeneID:100296421|LOC100296421:XM_002688329:200_cdna UTR3_Alt 2 NULL GeneID:100296421 6 GENE LOC100296421 NULL similar to UDP glucuronosyltransferase 2 family, polypeptide B17 EMBV3_16472 CGCATGTACTTGGGTGCCCCCTCAACACTTTGATATGACCAAAAATAGGGATTTGCTGCT Gene GeneID:514595|LETMD1:NM_001083430:71_cdna Constitutive 1 NULL GeneID:514595 5 GENE LETMD1 MGC148411 LETM1 domain containing 1 EMBV3_23478 AATACAAACTTGCAGGTGTTTTCCTTGGAGAACTTGTTGGAGAAAGTGGCACAGAAAATG Variant GeneID:613895|C12H13orf27:NM_001076295:35_cdna 468^673 2 EMBV3_37577 GeneID:613895 12 GENE C12H13orf27 C13orf27 MGC128345 chromosome 13 open reading frame 27 ortholog EMBV3_32589 CAGCTAGTGGTCACGTTTCCCTTTTAACTTTGGCTGTAGGAAGCTCAGTTCGACTTTCTG Gene GeneID:540294|MED20:NM_001103293:335_cdna Constitutive 0 NULL GeneID:540294 23 GENE MED20 MGC155171 mediator complex subunit 20 EMBV3_29046 CCTGCCCCATGCCCACATGAATGTCCCAGAAGAGAGTGATGAGAAATGAACATGGCACTT Gene GeneID:512981|EPB49:NM_001034431:73_cdna Constitutive 0 NULL GeneID:512981 8 GENE EPB49 MGC143115 erythrocyte membrane protein band 4.9 (dematin) EMBV3_19869 TGAGTCAAGAGTAACTTGTTCTGCCCCTACCACCACCCCAACTCCTGAGCAGCTTCTGTT Gene BVT0102_157100 + 0 NULL GK000018.2:36640463-36674603 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41003 AGGACCATCGTCATCCGCCGAGACTACCTTCACTACATCCGAAAGTACAACCGCTTTGAG Gene GeneID:539196|RPS11:NM_001024568:355_cdna Constitutive 0 NULL GeneID:539196 18 GENE RPS11 NULL ribosomal protein S11 EMBV3_02209 ACAGCTTATCATGGAGGCGAAAGAGTCTAGAGTTTAGGGAAACTCGGGCTGCCCAGGACT Variant GeneID:504914|UROD:XM_002686429:405_cdna 70^182 2 EMBV3_02882 GeneID:504914 3 GENE UROD NULL uroporphyrinogen decarboxylase EMBV3_33062 ATTCCCCTCTTGATTTGAGCAGAGTGCTGCTGGGTCTGGCGCTTTACCGGAAGTTCCTGA Gene GeneID:541158|GDAP1L1:NM_001076261:1255_cdna Constitutive 0 NULL GeneID:541158 13 GENE GDAP1L1 NULL ganglioside-induced differentiation-associated protein 1-like 1 EMBV3_38586 GAAGTTATTGAGTGCCTTCATCTCCCTCTGCCAATACCTGCTCTACCTGAGCTTCCACTG Gene GeneID:404115|KERIV:XM_002687248:84_cdna Constitutive 0 NULL GeneID:404115 5 GENE KERIV NULL cytokeratin type II, component IV EMBV3_33058 CCTTTCCCCAAATCAGGGCTCTGTGACCCAATCCCCCTTCAACGTAGACTTGTCTCCAAA Gene GeneID:504795|FHL3:NM_001034223:65_cdna Constitutive 0 NULL GeneID:504795 3 GENE FHL3 MGC128585 four and a half LIM domains 3 EMBV3_19531 ATCTCCTCCTGACAGAGTCAGAATTTCTCTGAGGCCTGGTGCCCCTAATCCGTGATTGTA Gene BVV0102_014788 + 0 NULL GK000019.2:36881129-36915566 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10999 TTCACTCCGGGCAGTGAACCCGCCTCGGGGGGCTTGGCGTGCTTCAAGACCCCGAGAAAC Gene BVT0102_339221 + 0 NULL GK000002.2:70587169-70691656 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05776 AAAGCCTTTGCCTGTTATTGTCAGGATGGGCTAACATCTCCTCCAGGTGGGACACAGGTG Gene BVT0102_123327 + 1 EMBV3_40729 GK000002.2:12360692-12963344 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33103 ATGGGAAACAACAGTTCCCACAAGAGAACCAAAGTGCCCAAGCAGGCCCGCAAGGAGAAG Gene GeneID:784244|LOC784244:XM_002692438:440_cdna Constitutive 0 NULL GeneID:784244 13 GENE LOC784244 NULL hypothetical LOC784244 EMBV3_17458 GGAACGGGTCCCTCCAGTCTGCCTTCCCATGTCCATCCACAGTTACAAGTGAGTTCTTAA Gene BVT0102_332485 + 0 NULL GK000009.2:98232759-98239671 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21386 TTCGTCCATAAACTCACAGGCTGGACTCCCTTTGCTCTGCCCTCTGCCTGGAATACAGCA Gene BVV0102_176813 + 0 NULL GK000015.2:45055127-45129296 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061407 1 XLOC_036970 Coding TCONS_00061407 XLOC_036970 Coding Coding EIF3F 15:45127288-45138883 j TSS45705 4341 1 TCONS_00061407_2 390 0.295093296475466 9 0.626358461273072 0.000162007383862299 3.32076587451319e-06 3.97447598079142e-16 1.63998170815911e-05 0.000416979099743835 2.34800228657073e-05 1.15215194613671e-05 4.00610049001177e-37 2.60630775389632e-06 0.000420340960127892 0.00017267009297486 0.000130173244168026 2.54446446821834e-05 0.000287001383301294 2.43045003237808e-05 0.00235271989459283 0.0017606316591941 0.00128439178487831 1.42455755021074e-21 4.5693103841766e-90 4.00319241506896e-06 0.00122445564325746 0.000550701464812573 0.00101232987578439 2.28231057923896e-05 3.99209313488852e-05 4.63466824894579e-05 8.88053584147591e-05 0.000165243983175213 0.000121010097213423 XM_002705797.3 EIF3F PREDICTED: Bos taurus eukaryotic translation initiation factor 3, subunit F (EIF3F), transcript variant X2, mRNA. 0.0 2834 100.00 0.361667818475006 NM_003754.2 EIF3F Homo sapiens eukaryotic translation initiation factor 3, subunit F (EIF3F), mRNA. 0.0 1413 84.09 0.297857636489288 TCONS_00061407_2 sp|O00303|EIF3F_HUMAN EIF3F_HUMAN Eukaryotic translation initiation factor 3 subunit F; 0.0 609 97.99 0.761538461538461 2 coding 0 0 0 0 0.514928373533721 0.14787587515683 -0.0288669687046516 0.652669712370533 CAGTAAGCAGAAGCACCTAGTTCACGTGGTGCAGGTTCAGCCTATGGCGCTCCTAATGTTCTCCAACTCGCTCCCTTCCGCTCCTCGCTCCTTCTCTCTCGACAAGATGGCCACACCGGCAGTACCGGCGAGCGCGCCTCCCGCCACCCCATCCGAAGCCCCAGCTGCGGCCTCATCTCCGGCCTCGGCCCCGGTCCCGGCCCCAGCCCCAGCCTCAGCCTCGGCCCCGGCTCCATCGCCGGCTCCGGCTGCAGCTCCATCGCCGGCTCCCGCGTCATCCTCAGACCCGGCAGCAGCAGCGGCTACGACCGCGGCTCCGGGCCAGACCCCGGCCTCAGCGCCAGCCCCAGCGCAGACCCCCGCACAGTCTCTGTCAGGCCCTGCTCTCCCAGGCCCCTTCCCCGGCGGCCGCGTGGTCCGGCTGCACCCGGTCATTTTGGCCTCCATCGTGGACAGCTACGAGCGACGCAACGAGGGAGCTGCCCGAGTTATCGGGACCCTGCTGGGAACCGTTGACAAGCACTCAGTGGAAGTCACCAATTGCTTTTCAGTGCCACACAATGAGTCAGAAGATGAGGTGGCTGTTGACATGGAGTTTGCTAAGAACATGTATGAGTTGCACAAGAAAGTCTCTCCAAACGAGCTCATCCTGGGCTGGTACGCTACAGGCCATGACATCACGGAGCACTCAGTGCTGATCCATGAGTACTATAGCCGAGAAGCCCCCAATCCCATTCACCTCACGGTGGACACCAGCCTCCAGAACGGCCGCATGAGCATCAAGGCCTACGTCAGCACTTTAATGGGTGTTCCTGGGAGGACCATGGGGGTGATGTTCACCCCTCTGACAGTGAAATACACATATTACGACACTGAACGCATTGGAGTTGACCTGATCATGAAGACCTGTTTTAGCCCCAACCGGGTGATCGGCCTCTCCAGTGACTTGCAGCAAGTGGGCGGGGCTTCCGCGCGCATCCAGGACGCCCTCAGCACAGTGCTGCAGTATGCGGAGGACGTGCTGTCTGGAAAGGTGTCAGCCGACAATACCGTGGGCCGCTTCTTGATGAGTCTGGTTAACCAAGTACCCAAAATAGTTCCCGAGGACTTCGAGACCATGCTCAACAGCAACATCAACGACCTGTTGATGGTGACCTATCTGGCCAACCTCACACAGTCACAAATTGCCCTCAATGAGAAGCTTGTGAACCTGTGAAGGGGCCTCAGGCAGCCCTCCTGCCATGCTGGGCCCCAGCCAAGCCCAGGACCCAGAATGGAGTGAAGGAGAAATGGTGTCTTTGTGGTCTGAGTCACACTGAGTCAATCAACTGCTTGTGACTCTAAATAAACATAGACTACCTTTTGTTAAGTGAATTCCATCTAATGTGAGTTTCCCTCTGGGTGGAAGAGAAAAGGCAGTTCTGGAGCTCACCCAGGAACTAGGAAGAAATCCGGAAGGGGTGACTGGGACAGAGGAAGTACATGGAAAATTGCTTAACCTGTTTAGAATCTAAGAAGGCAGGAGCCAGACCACAAGGGCCCACAACCTGTGGAGGTTGGATTTTTATCCTGGAAGTTGTGGGAAGGCATTGGATAATTAGATTTGGATTTCAGGAAGATTACTGGGTACTGGGTAGAGGAAGGAGGGAAAGGGAGAAAAACAGTAGGCAGAGAGAGAGGCAGAGGGTCACTGTGATTGTCAAGAGATGATGAGAGGTTCAGGCCGGGCCTTGGGGATGGTGACAGAGACTTGGGTTCAGGAGGCAGATCCAGGGAGGACCTGAAGTCTGGTTGACACTTGGATGGTGAGAGATGGGAGCAGTTTGGGATGTTGCCTGGTTTCTGATAAAGGTATAGAAGGGCTGGTGATACATGAAAACCCTGGCTGCTCGAGAGTGGTGGAAGCTGAGGATGCAGAGGTAGGGTTACAGGGTAGTTTACCAAATGGTGAAGTCTTAAATGCAAATAAATGTGACTTATTTTGTAAACTGGGGCCACACCAGATGTTTTGAGGAAAGGCTGAAGAATTCAAGTTACATGTTGGCTCATGTAATACTTATCAAATGCTAAGTGTGCTAAGCAAGAGGTCCTGGTGCCTGCTTAGAACCTGCAGGGGGGACAAAGAGCCCATCACTTTGGGAATCATAAGATGTTACAGGTCATGGAAGACTTCCAGTTAGAAAATGAAATCTAAGCTGGACTTGAAGAATGAGAAAGAGGCAGATTGAAAAAGAAAAGAAAGGAAAATAGGGTATTCTAGACAAAAAAACAGTATGTGCAAAGGCTTAGAGAAAGACTGTCACTCAGCGTTGCTCTGTTGTTGCCCACCCTGGCCACAGAGTTGTTTATAAGACACGAACAGTCCTCTGTGCCTACAAGGATGCTCAATTTTTTTTTCCCTAGCCTTTGCCTATATGTGCACATTTGTTTTTTCTATGAAATGTGTTTTCACACATTCTCTTTGTATGTGGTTGTGCCTTTGCTGAAAACACTGCATTGTGTCTGGGTGTGACATCATGTGTTACTTGAGTCCTGTGATACCACACTTCCTGATTTTCTCCCAACACTCTTACACACTGGTCCTTCCTCCTCTGATATCCGCCATCCCATCCCACCCCCAACAAGCTCCATTCCCCAGGCTTCCATCTTGAGCCCTCTGCCTGGAGGAGCTGAGAGAAGCTTGGGGCTGATTACTCCCTCTGTGTTAATGATGCCTAGGCTCCAACTCTGGCTGAAATTCAGAACTGGTTTCCTGATTCCAGAAATACCATGTCTCTCACCTGGATGTCTCAGAAGCATCTTAAATTCAGCATGTTTCGTATTCAGTTGACTGTCTTCCTCCCCAGCAAATCACTTCCTCAGGGAATAACACAACCATGTACGCAGTTGTCAAAGCCCAGAAACCCTGGGTGAATCCTTAATTCCCCCACCCACCATCATGCCTCAAACAGTTCATCACAACTCAGCCATCCCTCTTGCCCTCTGTGATACAATAAGAAATAAATTTTTCCATCCACGTTCCTAGATTCCTGGCATGCAGTTCTTAAACCCTTTGGAATTTCCTAGGTAATAAGACCTATAAAGAGAGAATCTTATCCCTAACCAACTTCTTTCAACTGCACCTGAGTTTATGCTAATGGAGCGATGTTTGTATAGCATCTGGATCACCACAGGATGGGGGCTGGTTGCCAGGTAAATCAACCATGTGATTGGAGCTTAGAACATTCAGCTCAGGGAGGGGAGAGGGGCTGAAGTTTGGATCAATCAATGACCACTGATTTAATCACTTGTGACTATGTGATGAGTCCTCCATTGAAAGCCCAAAGTTTGGGGAGCTGGATTGGTGAACAGGCACGTGTCCAGCAACAAGACACATACCAGGAAGACAGGGCACATAAAGTTCACAGGGATAGGGACCTCTGCTCTAGACCCTCCAGACTTCACCCTGTGCCTCTTCATCTGCCATTGAGTCACATCCTTTAATGTCTTGTAACAAAGCAGTAATGGTAGGTAGACTTCCTGAGTTCTGTGAGCTGCTCCAGCAAGTTGACTGGATCTGAGGAGACAGTTGTGGGAACCTCCAGTTCATAGCCAGTGGACAAGAAGCTCTGGTGTCAACCTGGATTTGTGATTGGTATTTGAAATGGAGGTGGGAGGGGAATATGGAGGGGAGGCGGTCTTGTTGGACTGAGACTTTGGCCTTAGGATCTGGTGCTGACTAGGCAGTTGATGTCAGAATTGAGTTAGGTTGGAGAACACTCAGCTGGTGTCTGGGCATCGCTTGATGTGAGGAAATCAGCTGCACTTCCGGTCATAGAAGTGTTTGATGTGGTAGTGTGGAGTAGAGGGAGACAGCTGACCTGTTCCCCCTCTTCCATCCATTCTCAAAGCAGCCACACTGCTCTTATAAATCCAACCAGGACAAACTGCTGATGAAGTTCATAGGTGTCTACTGCCAGGGTGAAGTCACACTTGTGCCATAGTCTGTAGGCTCAGCACGGCCTTGCCTGGCTCTTCGGCTTCGTCCATAAACTCACAGGCTGGACTCCCTTTGCTCTGCCCTCTGCCTGGAATACAGCACCTCTGGCTGGCTTAGTACTGCTGCTCTAGGTTAGTCTAGATGCTGCCTCCTCTTGGAAAGTGCTCCCATGCCATGATCCCACAACTGTCTCCTATTCAGCATCTGTCTCACCATTTTGGACTTGTCTGTTTACCCTCTGTTAGAACATAAGCTCTGTGAGGGCCAAGACTGTCTGTTCTGTTGGCTGTTAGATACCAGAAAATGTGTGTTCTCAGTAAATGTGTGTGACATGAATAAATGAATGGATGGCTTGTAAGATA EMBV3_37442 TCCCCAGATGAGCCGCTGGCCTCGGATAACCATGCAGACGATGCAGCCAATATGTCGTCA Gene BVT0102_033187 - 0 NULL GK000013.2:57217579-57571330 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40209 TCACACCAACCAAAAGATCCTGTGGTACAGGTTACGTGTTCTGTATGTTGCATCGCCTCC Variant GeneID:532641|ZFAND3:NM_001102145:47_cdna 509^676 3 EMBV3_29084 GeneID:532641 23 GENE ZFAND3 MGC155251 zinc finger, AN1-type domain 3 EMBV3_30597 CTGTCACACGTGCCGATCACCAGACACAATCCTGCAAAAGGACACCCGCCTCTATTTCTT Gene GeneID:520094|EIF2S2:NM_001015621:1138_cdna Constitutive 1 NULL GeneID:520094 13 GENE EIF2S2 MGC139724 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa EMBV3_28742 ACGGCACTGCTGGAGGCGAACTCCACGCCGGTGCGTGTCTACAGCCCGTACCAGGACTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28937 TTGATGGATATATCTTCATTGATAGTAAAGACCCAGAGTATAAGAAATTTTTAGAAACTT Variant GeneID:529442|UPF3A:XM_002692003:122_cdna 480^578 1 EMBV3_29288 GeneID:529442 12 GENE UPF3A NULL UPF3 regulator of nonsense transcripts homolog A (yeast) EMBV3_12866 CATCCTCATCAAGTTCAACGCGGTGCCCTTCAGCCAAGAGTACTTCCTGTGCCAGGTGTA Gene GeneID:539509|RXFP3:XM_002696399:160_cdna Constitutive 0 NULL GeneID:539509 20 GENE RXFP3 NULL relaxin/insulin-like family peptide receptor 3 EMBV3_02822 CTGGACTGCATCTCCCTAGTTAAATGTTTCTGGCACGTTAACTCCTGAGAGACACAGTTG Gene BVV0102_335002 + 0 NULL GK000030.2:36577769-36810511 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21264 ACTTTGGGTTGTGTCTGATGAGAACTGAGTTGTTGGCCTCTGTGAAATTTTTGGCTCTTG Gene GeneID:535671|KDM4C:XM_002689595:8_cdna Constitutive 0 NULL GeneID:535671 8 GENE KDM4C NULL lysine (K)-specific demethylase 4C EMBV3_01366 GCTGCATCCGAAACCTGTACATCAACAACGAGTTGCAGGACTTCACCAAGACACGGATGA Gene GeneID:510761|LOC510761:XM_002698413:352_cdna Constitutive 0 NULL GeneID:510761 26 GENE LOC510761 NULL similar to Slit homolog 1 (Drosophila) EMBV3_24789 CGCCCCTGAGGAATGGCCACAGAGATTCCATCACCACTGTCCGATCTTTCTTGGATGATT Gene GeneID:616849|WIPF2:XM_002695964:288_cdna Constitutive 2 NULL GeneID:616849 19 GENE WIPF2 NULL WAS/WASL interacting protein family, member 2 EMBV3_10089 GCAGCAATTTTCCTACCACTACCAAGCTGGTTTCGGGGAATTTCTTGCCATTAGACCCTC Gene GeneID:504799|CLN3:NM_001075174:245_cdna Constitutive 0 NULL GeneID:504799 25 GENE CLN3 MGC139946 ceroid-lipofuscinosis, neuronal 3 EMBV3_27204 TGCAAAAGTGCATTGGGCTTGTGGTGACTTCCTGGACCATTGGCTTTGTGCATGCCATGA Gene GeneID:530485|LOC530485:XM_002690676:265_cdna Constitutive 0 NULL GeneID:530485 10 GENE LOC530485 NULL similar to olfactory receptor 773 (predicted) EMBV3_11151 ACAAACCCCTCAGGACTCCGGGACCAGGTTCTTCTGGCTCATGTTGCGAATGTCTGCAAA Gene GeneID:507318|FLVCR2:XM_002691062:490_cdna Constitutive 0 NULL GeneID:507318 10 GENE FLVCR2 NULL feline leukemia virus subgroup C cellular receptor family, member 2 EMBV3_03213 AGTTTCATTCCTTTTTGAGCTTTATGAAAGTGGTATCAGACTGTATAGTAGCCTATGGGG Gene BVV0102_033568 + 0 NULL GK000003.2:28671400-28695270 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169276 TCONS_00169278 TCONS_00169277 TCONS_00169272 TCONS_00169275 1 XLOC_103329 Coding TCONS_00169278 XLOC_103329 Coding Coding SIKE1 3:28665526-28678017 = TSS126789 8090 2 TCONS_00169278_1 207 0.525834363411619 5 0.352682145716573 0.000292311657443499 0.000287181472493119 0.000268275129067689 0.000179548497875136 0.000449721592190124 0.000150881597023574 0.000195978664744083 0.00015023797915073 0.000514942304071035 7.87697553019749e-05 7.56426736621817e-05 4.22349517084513e-05 1.66118908311418e-05 3.07955648397011e-06 1.36783375117093e-07 0.00411470931754249 0.00162619786278427 0.00323941522125888 2.67449043720357e-07 4.50224327428083e-05 8.65823651566203e-05 0.00204487424575002 0.0015116735472878 0.00173263880050782 0.000320909955480642 0.000301093832299376 0.000149166921366752 0.000365751007251686 0.000639391256478992 0.000284100561604215 XM_005204011.1 SIKE1 PREDICTED: Bos taurus suppressor of IKBKE 1 (SIKE1), transcript 0.0 4857 99.56 0.334610630407911 NM_025073.2 SIKE1 Homo sapiens suppressor of IKBKE 1 (SIKE1), transcript variant 2, 0.0 1514 83.97 0.171199011124845 TCONS_00169278_1 sp|Q0VCF3|SIKE1_BOVIN SIKE1_BOVIN Suppressor of IKBKE 1; 3e-148 415 100.00 0.995169082125604 1 coding 1 0 1 1 -0.0782320088476172 0.650791018193928 -0.00111942509650609 0.980953501299482 GGAAGTGACGTCTGTAAAGCTGAGACTCGCTCAGGGACGCGCTGAGTCCTTGGCACTGGTGAGCGGTGTTCTGACTGCGGTCCTGGGGCCGCTATGAGCTGCACCATCGAGAAGATTCTGACAGACGCTAAGACTCTACTGGAGAGGCTGAGGGAGCACGATGCGGCTGCCGAGTCACTAGTGGATCAGTCGGCGGCTCTGCACCGGCGGGTAGCCGCTATGCGGGAGGCGGGGACAGCGCTTCCGGACCAGTATCAAGAGGATGCATCCGATATAAAGGACATGTCCAAATACAAACCTCACATTCTGCTGTCCCAAGAGAATACACAGATTAGAGACTTGCAGCAGGAAAACAGAGAGCTATGGGTTTCCCTGGAGGAACACCAGGATGCTTTGGAACTCATCATGAGCAAATACCGAAAACAGATGTTACAATTAATGGTTGCTAAAAAAGCAGCGGATGCTGAACCGGTCCTGAAAGCTCACCAGTCTCACTCTGCAGAAATTGAGAATCAGATTGACAGAATCTGTGAAATGGGAGAAGTGATGAGGAAAGCAGTTCAAATGGATGATGACCAATTTTGTAAGATTCAGGAAAAACTAGCGCAATTAGAGCTTGAAAATAAGGAACTTCGAGAATTATTGTCCATCAGCAGTGAGTCTCTTCAGGTCAGGAAGGAAAGCTCAGTGGACACTGCTTCCCAAGGCATCAAATAATTCAACTTCTGAATAATGCCTGGAGGTTGTTTATCAAGGAAGGAAGTTATTAACGCTATTCGAGTATTGTGCATTCATTGTCTTGCCTCAGAATTGATTTAATGTTGATTAAATGTATCAAGTGGCAGTTTACAATTTGCAGTCGAAAGTGGCTGTCCACAAAATAGTTTTAAGGTGTGTTAGTAAAAGTACACACTGAGTTTCACTATTCCTTTCTGTAAGAGACTAATTTTCATTTCTGGGACCGTGATTTATATAAACTGTGTTTTCAGTTCATTTTTGTTCTTTCATATCTCTGAAACTTATAGCATTTTGTTATAAGCCAGCAGTTTTATTTTATATCAGATTATAAATTGCAATTCTAAAAAATCTTAAACATTATCTTTTTAAGTCTATGTAGCATAAAGCTGGATTTTTTTCCATTTGAGAAAAATACAACTCCACAGAAGTTGATTGGCAGATTCTCTAATTTGTAACATAGATTCTCTAATTTGTAACATCATTCACCTTTTATGAAATTTTAAGTCTCTCTGGTGCTAAGAGTTGGCACCTTATGGCCTGGTGTCTTTACTCTTGAGAGAACCTATTGCTAGTCCCCATAAAATATACTTGAAAGTAAGTCAACTGTTTTTGTCCAGTGATAGTATATTCATCATATTGTTCAAAGAATGTTTAAAAATTTGTCCTGTGTATGTGTGTGCACATACATGTGCTTAGTTCAGATGCTGAAAGTAAATTTTATTTATTCTGTTTGATATTATTAGTCAATTCTTCAGTTTTGTCCTACTTGGAAATCTTCAACTTGGATAGTTTATCCAGTGTGAAGAATATATAATAGGTTTATTCACATCATAGTTAAAGGTACTACATTCTACAGTTTAATTTATATATAACTTGTAATTAAGAACCATCACTTGTTTGGATGTCTTTCATCACTGGTACTAGTAGTTGGCTTCTTTTTTAGATCCACTTTTCACAAGGAAGCAAAGTTTTATCACTTAATGAGAGTTTATTTCATGTCTAAAAGCTGTGTTGAGAGTCTAATGCTAAGTGATCAGCTAGGCTCACTCATCATTTCATTCCCCCATCTCAGTTTATTCATATTTCAAATGTATAAATTACTCATGTAATACTATCAATTTAGGTTTACCCCCAAATAATTGAAATAATGAATGCTAAATCTGTCAATATTTCCCAATTACCCTAAGCATTATACTGCATGGGACAGACACATCATTAGAAAGATTTTTGTTAGTGCTTTGAGTGGTGTAAACTTTCTTTTGTAACGCCATAAAGAATTAACACCAATTAAAACAACAGAATTTATCCAAGATATCTTAAAAGCATCTGATCCCAGTAATACTAACAGACTTTGCCTACAATGGTAGGCTGTAACGAAATTGGTATATGTCATTTTTTAATTTGTCAAATTTCTATTCAGAGTCTTGTAAACAATTTGAAAAACATTTCCACCCAAAGTGTGGATGTTCTTATCTCATTTCCTAAGAGTATGTAAATTTTTAGTCTGATCATTTGCCTTGAAGTGTATGTCCTAAGTACCACCGTGTCCCACAGTTCCATTCAGGAGGCAGAAATATGCCATTTGTTAGCTGCCATGGCCAATTTTTGGTGAAAATGATAAATCAAATGACCCACTAAAATATAACATAGTGTCCCTTTATCTGCTCTATGTCCCTTTAGAGATGTTTGTAGAGTTCCTTACATCTCAGATATCAGGATAAATCTAAATGCTGACTTTTCCTTTGGCAAATCAAAAACTTGAAGCTTGAGTCTCAACAGCTCTCAAGATCCTATATAATATAGAGCCTAGCTGGTGTTAATACTATGAAAATAGTGTGTAGTTAAAGAGGAGAAAGAATGTTCTTGACTTTGGTTTGTGTATGAAAGTTTACTTTGCAGTTGATGAAGGAACTTGACTAGCTTCCAAATTTTAGTACAAACTTACCTTTTCTAATAAAAATCTCATTTTGAGAATAACAGCTAATATAACTCAGTAATGAGTCAACTTATTAGAAAGTGCAAAGGTTTATTTTTCACTTATATAGCAAACTGTCAATTAGGGCTTTTCATAAATACTTCCTAATTATCACATTATAGTTAGTATAACCAAAAATAGTTATTTCTGAAATGGTGTTAGAGATGTCCTCATAGTTAGAAGTCGTAAGTTACATGATTACAAGTCAAAATGTAAAATTAAAACAGTTTGGAAGTATCTTGAAAATTAATTATTATTGATACCTACCTTTATTGTGTGTTAGTCATTAGTTATGTCTGACTCTTTGTGACCCCATTGACTGTAGCCCGCCAAGCTCCTCTGTCCGTGAACTTTTATTAGTATCATATGCATAATTTGATTCAACACTGAAAGTCTGTTTCAGTGTTCCTCAAAATGTGGTTCACTGACCTAAAATAAAAGTTGGGGGATGGAATCTAGGAATTTGTATTTTAATAATCATCCCAGATAACCTCTAAGGACATTAGTTTGAGACTGTCAAACTACTTGACAAAAAAATTGAGTGTTTTCAAAGAAAAATCTGGTAGAGGAGGCAAATGTGATAAATAAAAGGATATATTGAGTCCAAGGAGGAACTATTTACAACTTGAGAATCCTGTAGAGACAAAATAATGCTGAATGCTGAAGAAACTGAAATTGAATAGTTCTATAAGACCTACAAGACCTTCTAGGACTAACACCCAAAAAAGATGTCCTTTTCATTATAGGAGACTGGAATGCAAAAGTAGGAAGTCAAGAAATACCTGGAGTAACAGGCAAATCTGGTCTTGGAGTACAGAATGAAGTAGAGCAAAGGCTACTAGAGTTTCACCAAGAGAACGCACTAGTCATAGCAAATGCCCTCTTCCAACAACACAAGAGAAGACTCTATACATGGACATCACCAGATGGTCAATACTGAAATCAGCTTGATTATATTCTTTGTACCAAAGATGGAGAAGTTCTATACAGTCAGCAAAAACAAGACTGGGAGCCAACTGTGGCTCAGACCATGAACTCCTTATTGCCAAATTCAGACTTAAGTTGAAGAAAATAGGGAAAACCACTAGACCATTCAGGTATGACATAAATCAAATCCCTTATGACTATACATTGAAAGTGAGAAATCGATTCAAGGGATTAGATCTGATAAGAGTGCCTGAAGAAATATGGATGGAGGTTCATGACATTGTACAGAAGGCAGGGATCAAGACCATCCCCAAGAAAAAGAAAGGCAAAATAGTTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGTGAGAGGCAAGGGAGTAAAGGAAAGATACACCCATTTGAATGCAGAGTTCCAAAGAATAGCAAGGAGAGAGAAGAAAGCCTTCCTCAGTGATCAGTGCAGAGAAATGGAGGAAAACAATCCAATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAATGGACACAATAAAGGACAGAAATGATACGGACCTAACAGAAGCAGAAGATATTAAGAAGAGATGGCAAGAATACACAGAAGAATTATTTTTAAAAAGATCTTCATGACCCAGATAATCACAATGATATGATCACTCACCTAGAGCCAGACATCCTGGAATGCGAAGTCAAGTGAGCCTTAGGAAGCATGACTACAACAAAGCTAATGGAGGTGATAGAATTCTAGTTGAGCTCTTTCAAATCCTAAAAGATGATGCTGTGAAAGCGCTGCACTCAATATACCAGCAAATTTGGAAAACTCAGCAGTGACCGCAGGACTGGAAAATGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATATTCAAACTACTGCACAATGAACGCATATCAAACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCTGGCTTCAACAGTACATGAACCGTGAACTTCCAGATGTTCAAGCTGGATTTAGAAAAGGCAGAGGAACCAGAGATCAAATTTCCAACATCTGTTGGATCATTGAAAAAGCAAGAAAGTTCCAGAAAAATATCTACTTTGGCTTTATTGACTATGCCAAAGCCTTTGATTACATGGATCACAACAAACTGTGGAAAATTCTCCAAGAGATGGAAATACCAGACCACCTGACCTACCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACATCAAGACTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGAGTACAACATGAGAAACACTGGGCTGGAGAAAGCACCAGCTGGAATCAAGATTGCCGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAATGAAGAATAACTAAAGAGCCTCTTGATAAAAGTGAAAGAGGAGAGTGGAAAAAGTTGGCTTAAAACTCAACATTCAGAAAATGAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGATGGGGAAACAGTGACAGACTATATTTTTGGGGGCTCCAAAATCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGTAAAGCTATGACCAACCTAGACAGCATCTTAAAAAGCAGAGACATTACTTTGCCAACAAAGCTCCATCTAGTCAAAGCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGACGGACTATAAAGAAAGCTGAGTGCTGAAGAATTGATGCTTTTGAACTGTGGTGCTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCAAACCAGTCCATCCTAAAGGAAATCAGTCCTGAGTATTCATTGGAAGGACTGATGTTGTAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGAACTGAATCATTGGAAAAGACCTGGATGCTGGGAAAGACGGAGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGTAGTCCATGGGGTCACAAAGAGTCGGACACTTACTGAGCGACTTCACTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGCGGAGCCTGGTGGGCTGCCATCTGTGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGTTGGGAAAGATTGAAGGCAGGAGGAGAAAGGGACGACAGAGGATGGGATGTTTGGATGGCATCACTGACTCAATGGACATGAGTTTGAGAAAACTCCAGTTGTTGATGGACAGGGAGGCCTGTCGTGCTACAGTCCATGGGGTCGCAAAGAGACGCAACTGAGCGCCTGAACTGAACTGAGAGACAAAAATAAGTAGAAGAACTAGAAAGCTGGGTCCTTTCTAGTTATTGTAAAATCTCCGTTTCCAGTTGTGCTTCATTTTACAGATACGCAGGTACACAAGGAGGTTATTCTAACAGAAACCAAGATTCAAATGCAGATTTGAAACATTGTTAACCATTAAGATTCCTTTACATGCCAAATACTCTTCAGAATTCAAGTGGTTCTTGATAAGCAAAATCTACTTTTATTAACAGTGCAAAAGAAACACCACAGCCCACATATTAGAAAATATCATGAATTTAATAATTGAAGCCTGGAGAAGGAAATAGCAACCCACTACATTACCCTTGCCTGGAAAATTCCATGGATGGAGGAGCCTGGTGGGCTATAGTCCATAGGGTCACAAAGAGTCAGACATGACTGAGCAACTTCACTTTCACTTTCAGTAATGAGACCTAATTGTCATCTGTTTTCCAGGGTGTGCGTGCAACTGAAAGGAACAGTGTTTAATCAGTGCTTAGCAATACTAACTACATACAGGAAGTGTGTGATTCTGTCTTTCAAATCTGCCTCATTAGCATGTTTTTCATCTTTCATGCTATTTTCATGTTGCAGGAAGGTTGCTGCTGTGCCAGAAGTCATGTCCATGTTTGAAAGCAGGAAAAAAAGGAGGGGGGAAATAGCCTATGCCAGCTATACCTATTCTCCTTTATGAGGAAAAGCAAAGCTTCCCCAGAAATCCAGAGTTTCCTTTGTCTTATTTGCCTGACCTGTTAAATTGTTAACTTCTAACAGCAAAAGAGGCTGGGTACATGGCTGCCCCAGATAAAATCAGTATTCTGTTAGGAAAGAGTATTAAGAAAGCAGCTAACGACAGTCTTTACACTGAATAGTTTTTAACCATTGTGTTGATGTTGAATGGCCAAGGAATGGGGTGCAGAAGATACCTGTCATCTCTCTTCTGGCTGCCCATTATCCTAACTCATACTATAGTTAGGGAACCTATCACCTAATGAGGCAGGACCTTACTCCTTCCTGACAAATTTTAAAGTGTCAGATACTTGTTTTCCCAGCCTCTTTGCAGCCAGGGAAGACACCTCTGCCTTAAAAGTTCGTGATAGAAAGAGGGAGAGCTGTGCAGACGTCTTTGAGTAAAGGCAGTGATATACAACACCGGCTTCTCCATCCAGCTCCACAGGAAGCAATAAAAAAATAGCTGCACTGACAACACTCAGTATCCAGTGTCAGCAAAGCCCATGGTGTAAGCTGCAGTGTCTGCCCGCAGTGGAGACGGTGGGGTCTTCACTGAAGCTATTATCTGAAGTGATTATAGAGGTTGTAGAGCCTCTAAATCTGGTTTTCAGGGTATCCAGAGATCCTGAGGGTTACTTATTAGCTTTTACTAATGTCACTTTTTGTTAAAATTAACCTGAATTGACTATAATTAAGACTGGAACCCTGACTGACAAAATAAGCATAGTTTAAAAAGCAACCTTTTGAATATAAATTTTGTCCACACTTGATGCATAATTTTACACTTAATGTTTTAATGTAATTTTTTACTTACAAAAGGATGTGACATGCATATAAATTATCAAGCATAATAATTCATCTCCTAATTTAGGAAATAGAACATTACCCATTTGTTACATTTATTTATTTGAGCTCCTCTCCTGTCTCTATCCCTCTGCTCTGTCTTTTTAATAGTTTTGTCACATGAAGAAAGACCTGAAACATGTATCTCACCCTGAAGTGACATTTTTAGTTTCATTCCTTTTTGAGCTTTATGAAAGTGGTATCAGACTGTATAGTAGCCTATGGGGATTTTATTTTTTTCACTCTTGATTATGTTTCTAAGATTCATGGTATTGTGTATAGTTGTCATTCATTTTCATTGATGTATAAGAGTTAATCATGTGACTACAGTATATTTTGAAGGGGTACATACATATAAAATAAAATTGTACATTTTTTTAA EMBV3_04605 AACTTGGACATAGATCAGAAGCTAAAGATGGTGGTATCGGGCCCCTGAGCTACTGTTCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21306 CGAGAGCGGCCCCCTGGGCTCCGCAACTACGACTGTGAGAAAGAGAAGGAGGAGAGCTAT Variant GeneID:515716|NKAPL:NM_001102498:22_cdna 289^369 1 EMBV3_38695 GeneID:515716 23 GENE NKAPL MGC159917 NFKB activating protein-like EMBV3_04100 TGGCTGAGTTTTGGTGCAGCCGCGTAGAGTGGAACCCTGAGGAGGAGAAGTACCACCTGA Gene GeneID:511919|ATHL1:XM_002683732:8_cdna Constitutive 0 NULL GeneID:511919 11 GENE ATHL1 NULL ATH1, acid trehalase-like 1 (yeast) EMBV3_19017 CTTTCCTGGCTGGAGAAGTTGGTTTCGGCTAGAGCGTTCGTTTCCTAACCTGGATCCACA Gene BVT0102_122762 + 1 EMBV3_28726 GK000011.2:44508088-44509054 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19695 TGCCTACGATCTTTCCTTTTGGTCCGTGGACGAGCGGTGCTCAGCGACCGGGACCAGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18566 TTGAACCATTATATGGCAATAGTCAGAATACAAAAATGTCTCCATGGGGGTTTGGTCCCC Gene GeneID:511575|GPX8:NM_001046088:67_cdna Constitutive 1 NULL GeneID:511575 20 GENE GPX8 MGC133953 glutathione peroxidase 8 (putative) EMBV3_21425 CCGATATTATGAGTTTTAACGTTAAAGACTACTTTTATGTCCATTTTTTTAATATAAATT Gene GeneID:100144618|CTCFL:NM_001123365:665_cdna Constitutive 2 NULL GeneID:100144618 13 GENE CTCFL BORIS CCCTC-binding factor (zinc finger protein)-like EMBV3_16559 GTGCTCATTCTCCCTAACTAGCAAATCCCACTGTATACAAAGCTGTTCTCTTGTTCTGCC Gene GeneID:508722|RBM39:XM_002692451:478_cdna UTR3_Alt 4 NULL GeneID:508722 13 GENE RBM39 NULL RNA binding motif protein 39 EMBV3_36584 TGTATATAGATGAGTGTAACATTTCTGTGTCACATAGGTAGAGACAGGCTTATATAGTCC Gene GeneID:538761|CLDN8:NM_001098096:11_cdna Constitutive 1 NULL GeneID:538761 1 GENE CLDN8 NULL claudin 8 EMBV3_32462 GTCAATCACTTCTTTTGTGAGGCACCATCGCTTGTTCACCTTGCCTGTGCTGACACCATG Gene GeneID:616651|LOC616651:XM_002689091:20_cdna Constitutive 0 NULL GeneID:616651 7 GENE LOC616651 NULL similar to olfactory receptor Olr1455 EMBV3_31801 CTAGTTCTAAATTTTATGATTCTAACTCCTACATTTATCAATTTATCAAGTTTATCAATT Gene GeneID:505251|ELF1:NM_001077853:38_cdna Constitutive 2 NULL GeneID:505251 12 GENE ELF1 MGC139879 E74-like factor 1 (ets domain transcription factor) EMBV3_26120 CCCTCAGCCATCACACCCAACTCTTCCAGTTCTCTTCTAGTTGCAGCCCACTCTCACTTC Gene GeneID:538672|THPO:NM_001166040:49_cdna Constitutive 0 NULL GeneID:538672 1 GENE THPO NULL thrombopoietin EMBV3_02622 GGCAAAGCAATCCTAAAAAAAAGAAAACCTGGAGGTATAACCTTCCCAGACTTCAGACTG Gene BVV0102_459916 - 1 EMBV3_08380 GK000002.2:1104772-1162440 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32253 AACTGCGTCTAGACAGCCCTTTCCCATTCCTGGGCTCTGGTGCCACTGGCTATTCCAAGC Gene GeneID:615643|LOC615643:XM_002695149:708_cdna Constitutive 0 NULL GeneID:615643 18 GENE LOC615643 NULL similar to hCG2040171 EMBV3_06207 CGGCGACCCTATGCCAGTGGGGTCGCCCAGGTATCTAAGTCCTTTGCTGTGGGCACGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25732 TAAATACTGAAGGGAAGTGATGGGGAAGAGGTAGCGGGGAGGTGCGTGTGATCAGAGTCC Gene GeneID:504543|TBC1D20:NM_001038029:847_cdna Constitutive 0 NULL GeneID:504543 13 GENE TBC1D20 MGC134100 TBC1 domain family, member 20 EMBV3_10704 CTCAACAAGCGAGTAGAAGCTATGAAGCAGGAATTACAAGCACATGTTGACCAGATAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41140 CAGGTTGTACGAGGGCACTACAAAAGGCAGCAAATTGGCAAAGTAGTCCAGGTTTACAGG Gene GeneID:782479|LOC782479:XR_083794:498_cdna Constitutive 0 NULL GeneID:782479 11 PSEUDO LOC782479 NULL similar to ribosomal protein L26 EMBV3_30470 TCCTATCGGAGGAGCTGTAACACACACTAGATGCCTTTTGTGCTCTTTTCCTGTGGGTGT Gene GeneID:513180|SDCCAG3:NM_001046140:85_cdna Constitutive 0 NULL GeneID:513180 11 GENE SDCCAG3 MGC128414 serologically defined colon cancer antigen 3 EMBV3_27109 AGCTGCATCCATGAGAAGGCACCTTGTAACAGACAAAAGCCCACTCCCCATTGACCGCAT Gene GeneID:504806|IRG1:XM_002691898:10_cdna Constitutive 0 NULL GeneID:504806 12 GENE IRG1 NULL immunoresponsive 1 homolog (mouse) EMBV3_20770 GGGCTATAGTCCATGGAGTTGCAAAGAGTCAGGCACAACTGAGCAAGTAACACTACTGCT Gene BVV0102_261321 + 0 NULL GK000008.2:31464960-31581487 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224883 1 XLOC_137651 Coding TCONS_00224883 XLOC_137651 NonCoding Coding - 8:31482083-31482874 - TSS168541 791 1 TCONS_00224883_1 95 0.828065739570164 1 0 0.000309610990302751 4.51192375046772e-05 0.000179621278892408 3.14949321879016e-05 0.000131075510503749 4.52219261377323e-06 0 8.97302812134419e-05 0 0 0 0 0 0 0 0 0 0 0.000244773065426797 0 0 0 0 0 0 1.87634260083592e-120 0.000146293580872145 0 0 0 XM_005224063.1 AQP4 PREDICTED: Bos taurus aquaporin 4 (AQP4), transcript variant X1, 7e-59 232 86.50 0.24905183312263 0 noncoding 0 0 0 0 0.906468764987484 0.0152584221908443 -0.0919590660106511 0.0907945144692855 CAAATGAGAGCCATACCGGTCAACTCCTTGATTTAGACCTTCTGAGACCCTGAGCAGAAGATTCAGTTGAGCCCCCCTGACCCTGACTTACAAAACAGTGAGAAAACAGCTTTTGGTGATTTGTTCTGTTTCAATAGCAAAATAATATTGTTAGTTTTAAGTGTATGGACTTCCACTGGATAGATAACCAGAAAATAATAATAGCCTAACTATTCAGAATTAGAAAGGAGCAAAGGACTAATATGGGCTTCCCTATAGCTCAGGTGGTAAAGAATCTGCCTGCCATGCAGAAGACCCGGGTTCGATCCCTAGGTTGGAAAGATCCCCTGGAGAAGGGAATGGCAACCCACTCCAGTGTTCTTGCTGGAGAATCCCATGGACAGAGTAGCCTAGTGGGCTATAGTCCATGGAGTTGCAAAGAGTCAGGCACAACTGAGCAAGTAACACTACTGCTACTAAAAGGACTAATATACACAATAACAGGCATGTGTCTCAGAAACTTTTTGTTGATCCAGAGATGCCAGAATTAAAAGAGATCATATTCTATGATCCCATTTATAAAAGTCCAAGAACAGGCAAAAATAATTTATGGTGATAGAAATCAGAAAACAGCTGCTTGTGAAGGCCAAATGGGAGAGTCAGGGTTAGCTGAAAAGGGTCATGAGTGATCTTTCTGGGGTGATGGACATATTTGATGTCTAGTTTGCTGGTGGTTTCAAGGGTGTATGCAACTGTCACAACTCATAGAACTGAATATTTAAGATTTGTGTGCATCTTTCTGTATCTATATT TCONS_00227270 r 3' 98614 TCONS_00227270 r 3' 99404 EMBV3_23091 GGGGTGGGTCTGGCTGGATACATAACTCAGATCAAACAAGGCCAGGAATCAATCTTTCTC Gene BVT0102_041416 - 0 NULL GK000010.2:4190895-4305630 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015691 1 XLOC_008537 Coding TCONS_00015691 XLOC_008537 NonCoding Coding - 10:4264488-4266501 - TSS11025 2013 3 TCONS_00015691_2 71 0.291604570293095 1 0 0 0.000114810657744531 0.000411171098107403 0 2.45264816904103e-07 0 0 0 8.23113098467084e-05 2.04395944591506e-06 0 0 0 0 6.82430086357564e-05 0 0 0 7.90071355134491e-05 0.000107174941780343 3.02566669891816e-05 0 0 0 0 1.16666062419318e-06 3.81330753859397e-05 4.7715731603995e-05 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 4e-48 197 82.00 0.0968703427719821 0 noncoding 0 0 0 0 0.144322380570551 0.211934577935666 -0.0569962422421118 0.450504894969651 AGCCTTGAAACTTATGAGCCACGGCCCTGACCGATCTTTGGAACTGCTGACCTGTGAGCTGTCCCTGCCTGTACCCTCAGCAGTCTTATCTACCAAAGACTACCACATAACCCCTGCCGAGGGGATTTCCTGCTGTTGTTTAACCTCCATTCATTCCATCTTCTGGTAACATTGCCTCAGTTTTCCTTTGAGGCAGCAGTGTACGTGCATTCAGTCTCTCGCTCGTGTTTGAGTCTTTGCGACCCCACAGACTGTCACCAGGCTCCTCTGTGCATGGACTTTTCCAGGCAAGCATATTGGAGCAAGTTGGCGTTTCCTACTCCAGGGGATCTTCCCAGCCCAGGGACTGAACCCACGTTTCTTATGTCTCCTGCATTGGCAGGCAGATTCTTTACCACTATTGCCACCTGGGAAGCCCTTGGAGTAGCAGGAGGAGGGCCAGACCCAGCCAACCACTCATTTCATTTTTCAGACCTTCTGATTGTTTAAGCAGACAGGACACGCTACGCAGGTCAGTGAGATGAAGCAGTCCTGGGACTAATGTGGAGCTGTTCAGAAGGAGAGAAGCACTCTTTCCTTAGCCTAGCTGAACGAAAGCCTGGATTCTTCAAGCCTTCACATGAGGGTGTGCTGAAAATGAAGGCCGCACAGAGGAATTTGAATGAAGAGTTAGCAAGAGAAAGATTGATTCCTGGCCTTGTTTGATCTGAGTTATGTATCCAGCCAGACCCACCCCTGAAATGTTTAGCACATGCCTTCTGAGCAAGGGGGTTTTTCTCAGTTTGAACTCAGAGTCCCAGCAGATTCATCCACCCAACATGTGGGGCTTCCTAAAGCCATTCTCTAAGCTCACAGCTGCTTGAAAAAAAAAAAATATTATCATCCCCCCAAACAAATGCTGTAGTTCTTCCTTGTTTCCCTCCCTTCTCCCTTCAAGTCCAGAAAAAGGTGGCAGGGCCCAGCATGGGGTCTTGAAAACCCTGGCTTTGAACTTGTCCTCAGACCAGTGACTCCATGCTTAGAGGAAACCGAGGCTGGTTCTCCAGACCTTGACACAGCCGCTCCGGGCCCAGTGAGATGCTTGTGCCAAAGGGCCTCTGCTCTCAGGGGAACCTGGTGCCAGGTCTTTGCTGGAATCACCCAGCATTCCAGACCTTCTGGACAGACTGAGACGACCGGGGCATGTTCTCAGCTTGGCAGCCATTGGAGATACAGCAACAAGAAGGCATTTTCCGAGAAAGATGGTGAATTTTCAGTAGTCTTACTACTCTAGTGGTAGGGATTTTTTAATAAGTTTATATCTTTTGCAGGAATGGCAAGTTCCAGGGCTCTTTCAGTAAAGCAAGAAAGCTGGAGAGGCAAAGCAGAGAGGACGTTGTAGATAGTGAAGCAACATTCAACCGGAAAATGTAGCAATTGCATAAAAACCCAGAAAACAAAAGAAAACAGAACTGATACTTCCTTGCTTGCTCTTACTGTAGAAGCACTTTTTTTTTTGGTAGAACACATTTTTAAACATCGAGTCATCAGATTGTTCCAAGGGCTTACCAAGCAGGAGGAAAATTACTGTCTATGCGTTGATTCCCAGTGACCCCTCTGCCTTGGGTCCCCGTATAGGAGGGACTGGGGAGGCATCCTGAAGTCTCCAGGCTCAAGTTCTCCTCTGGAAGAAGGAAAAGGCTTGGATGAGTGCCCCAGAGCTTGGGCGCCTCCTCCCTTTACTTCATGCAGGTGCCTGGACCTTGAATCCGGGAGGAAGGGCAGTGAGGCTGACAGTGGATTTCTAGGTGAGGCCGGCGGGAGGCTGCCATGCTGGGTGAGGTGGAGGACGCTGCAGGCACAGGCTGCCATGCTGGGTGAGGCGGAGGACGCTGCAGGCACAGGTGGCTGGCGTTCTTTTCAACCAAATGACTCACTGGACAAAGACTTGTCACCGACTGGTTAGACTGGCATCTTGTAGGGCCCGCCTCACCCTGCAAGTCACCTCACTAGTATTTAAATATACAGGCTTTG TCONS_00015684 s 3' 35374 TCONS_00015684 s 3' 35374 EMBV3_13932 GGTTGAGAATTGTTTTACGACCTGTAAGACTTGTCATTCTGATAAGAGTTTTTCATCTGG Gene BVT0102_170958 + 0 NULL GK000012.2:21697384-21767718 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034842 TCONS_00034838 TCONS_00034829 TCONS_00034833 TCONS_00034826 TCONS_00034844 TCONS_00034837 TCONS_00034828 TCONS_00034845 TCONS_00034831 TCONS_00034834 TCONS_00034836 TCONS_00034830 TCONS_00034835 1 XLOC_020763 Coding TCONS_00034845 XLOC_020763 Coding Coding LOC516736 12:21750405-21796575 = TSS25641 1413 1 TCONS_00034845_2 470 17 0.969763261062618 0.000807022813229876 9.59865828755371e-05 0.000196694168771658 5.67029213410716e-05 3.15133083481873e-35 1.40900729663332e-93 0.000131280431037895 0.000344598983331785 5.40829712100794e-101 2.57417469982962e-15 0.000160581220641154 0 5.00393416612743e-06 0.000376505196838335 0.000170624178564143 8.40534966529045e-42 0 0 9.34560504214939e-30 1.04956671394331e-25 3.86215063939949e-272 0.000960838100584906 0.00014832685618805 0.000616957063119679 5.36683318148184e-59 0 0.00010686985695944 0.00017652802352745 8.26300866506959e-11 1.58454372407139e-05 XM_005213725.1 LOC516736 PREDICTED: Bos taurus phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like (LOC516736), transcript variant X3, mRNA. 0.0 2486 99.15 0.985138004246285 NM_199254.2 TPTE2 Homo sapiens transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 (TPTE2), transcript variant 3, mRNA. 0.0 1101 77.85 0.976645435244161 TCONS_00034845_2 sp|Q6XPS3|TPTE2_HUMAN TPTE2_HUMAN Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2; 0.0 606 65.37 0.980851063829787 3 coding 1 0 1 1 -0.254209520513172 0.111934259778052 0.0262248897043212 0.590535248534965 ATGAGAAGCATCGATGAAAGTAGCAAGATAAAGAGAATTGTGTACTTAATTATATCATCCTTCACTTTCAGAATATTTGCAATCTTGCTGATCTTTCTGGACATGGCCCTCATCATCAAAGATGTAATTTTCCTTAGTGGCACGACACAGATTTCTTTGGAATCTCGTTCAGTTTCTTTTGTTATTGCTTTTTTTTTTTTCATGGATGTTTCTCTTCGAGTGTTTATAGAAGGGATACGACCATATTTTTCTGATATATTTAACTCCTTAGATGCTGCCATTATTATTGTGACTCTACTGGTTGATATCACTTATCTTTTGTATGACTCTATACTTGCTAAAATTTTCCCCAGGTTGAGAATTGTTTTACGACCTGTAAGACTTGTCATTCTGATAAGAGTTTTTCATCTGGCTTATCAAAAAAGACATCTTGAAATGCTAACCAGAAGGATGGTTTCAGGAAACAAACGGCGGTACAAGAAGGATGGATTTGACTTAGACCTCACTTATGTTACTGAGCGTATTATTGCCATGTCATTCCCATCTTCTGGAAAGCAGTCTTTCTACAGGAATCCCATTAAGGAAGTTGTGCGGTTCCTGGATACCAAGCACCCAAACCACTATCAAGTTTACAATCTCTGCAGTGAAAGAGCTTATGATCCTAAGTACTTCCATCATAGGGTCCATCGATACTTGATTGATGATCACAACGTCCCCTCTCTGAGTGAGATGCTGGCGTTCTCCATGGAAGTGAAAGAGTGGATGGCTCAAGACAAGGACAATATCATAGTGGTTCACTGTAAGGGAGGCAAAGGAAGAACTGGAACTATGGTCTGTGCCTACCTTCTTGCCAGTGAGATATTTGCCACTGCGGAGGACAGCCTGTATTATTTTGGAGAACGGCGAACAGATAAATCCACTAGCAGTAAATTTCAGGGAATAGAGACTCCTTCTCAGAATAGATTCGTTGGATATTTTGCAATGGTGAAAAATATCTACAATTTGACTCTTCCTCCAATAAAAAAACTCACGATCAAAAAATTCGTGATTTATTCAATTCATGGCAATGGACATGATCTAAAAGTACAAATAATAATGCAACGAAAGACTGTCTTTTTCTGTTCTGCTTCCAAAAACTGTAGGATATTTCATGATGCTGAAACAGACAGAGTAATAATCTTGCTCTCTAAGTGCCCACCTCTGTATGATGAGGTAAAAGTGAGATTTTTCTCTTCTTCGGCTCTTCCTAAATACTACGAAAACTGTGCATTCTTCTTCTGGTTCCATATGTCTTTTATACGAAATAACAGGCTTTATCTTTCAAGAAGTGAATTGGATAATCCCCATAAAATAAAAGCATGGAAAGCTTACAGTCCACAGTTTGCAGTCGAGGTATATTTTGATGACATTTAA EMBV3_05861 GTTGGTTTTGGAGAGCAACCCGCTGGAGTGGTCGGTGACGGATGTGGTGAGGTTCATCAA Gene GeneID:528635|SFMBT2:XM_002692062:17_cdna Constitutive 0 NULL GeneID:528635 13 GENE SFMBT2 NULL Scm-like with four mbt domains 2 EMBV3_13461 AAGATCTGAAATTAAACTCGTCTTCATGCTGATAAGGTCAGAGATGTTAAGGAGGTAAGG Gene BVV0102_311804 + 1 EMBV3_04479 GK000001.2:32837552-33361649 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24455 TTTCTCAGGAGGTTAAGATTTGCATCGAAGGCCGCTCTAACGTAGGCAAGTAGAAGCCGC Gene GeneID:616399|ATXN1:XM_002697578:434_cdna Constitutive 0 NULL GeneID:616399 23 GENE ATXN1 NULL ataxin 1 EMBV3_32474 GGAAACCAGGAAGTCAGTGCTTTTGGTGAGAAAGTGACTGCATGGGTAAGAAGAAAATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24932 TTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGTGATCTC Gene GeneID:100313263|MIR421:NR_031062:6_cdna Constitutive 0 NULL GeneID:100313263 X GENE MIR421 bta-mir-421 microRNA mir-421 EMBV3_23752 ACTTCAAGAGTGCCGAGGTCGCTTTGACGTCATCTTCACCTGTGTGGAGAGTGTCTACGA Gene GeneID:788363|LOC788363:XM_002693443:94_cdna Constitutive 0 NULL GeneID:788363 15 GENE LOC788363 NULL similar to hCG1991759 EMBV3_18989 CCGGAGCCTGAGCCCGAGCTGGAGCAGAAGACCCAGCCTGTGGTAGAGAGCCTGGGGCAT Variant GeneID:507157|TMEM59L:NM_001075301:29_cdna 489^641 1 EMBV3_34711 GeneID:507157 7 GENE TMEM59L MGC140689 transmembrane protein 59-like EMBV3_15928 CGTGTCCTCTGCATTTGGAGCGTGGAGTCTTTTCCACAGGACCACCAGAGAAATCCCTAT Gene BVT0101_041392 + 0 NULL GK000005.2:101690822-101725101 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201321 1 XLOC_122968 NonCoding TCONS_00201321 XLOC_122968 NonCoding NonCoding - 5:101702535-101702780 - TSS150889 245 2 TCONS_00201321_2 66 0.983673469387755 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000107802303444298 0 0 0 0 0 3.0288474524551e-05 0.000112335351810398 0.000239494704416366 0 0 1.19574511157871e-05 0 1.98147176608819e-05 0.000944781804680951 XR_225993.1 LOC101904134 PREDICTED: Bos taurus uncharacterized LOC101904134 (LOC101904134), 9e-13 77.0 72.66 0.46530612244898 0 noncoding 0 0 0 0 -0.0558566744393968 0.715748616078241 0.026377379487547 0.687996572412194 AGGGGAGGATAGAGAAAAGGGACAGTTAGGGAGTTTGGGATCGACATGTACACACTGATATATTTTAAATGGATAGGGATTTCTCTGGTGGTCCTGTGGAAAAGACTCCACGCTCCAAATGCAGAGGACACGGGTCAGGGAACCAGATCACACACACTGCAAGTAAGATCCAGCAGGCCACAACTAAGAGTCTTCAAGCCACAGCCAAAGGTCCCGAATACCAAAACTAAGGTCTGGAAAAGCCC TCONS_00196099 TCONS_00196100 TCONS_00196101 TCONS_00196102 TCONS_00196103 TCONS_00196104 . 3' 5544 TCONS_00196099 TCONS_00196100 TCONS_00196101 TCONS_00196102 TCONS_00196103 TCONS_00196104 . 3' 5788 EMBV3_26820 CGGCTGAGATCCAGGCCATTGCTGACAAAGTGAAGTCTCCGCTGGAAGAGAAGGAAAACA Gene GeneID:787788|LOC787788:XM_002689851:44_cdna Constitutive 0 NULL GeneID:787788 8 GENE LOC787788 NULL similar to Cystatin-B (Stefin-B) EMBV3_43635 TCCCTCTAGGAAAAACCTGACATGTACCGAGCAAGTTTCCAGGACATAATCCACCAGACC Gene BVV0102_128065 + 1 EMBV3_08606 GK000020.2:26280531-27745394 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36661 TCTTTGGGCTTTGACTCTTCCCTTATCATGCTCTCCTACGCCCTGATCCTACAGACCGTG Gene GeneID:618075|LOC618075:XM_002693414:100_cdna Constitutive 0 NULL GeneID:618075 15 GENE LOC618075 NULL similar to olfactory receptor Olr43 EMBV3_06262 GGGTCATAAAACGTCGAACACGACTTAGTGGCGGAACAACAGCAGCGTGGGTGATGTGAA Gene GeneID:505421|NPHP1:NM_001105332:32_cdna Constitutive 0 NULL GeneID:505421 11 GENE NPHP1 MGC139015 nephronophthisis 1 (juvenile) EMBV3_22119 AAAGACTTCTGAATATAAAGGGTCTGAAATGTATTATATTTTTGTCCTGGTTTTAAATCT Variant GeneID:516328|USP1:NM_001046224:60_cdna 463^583 1 EMBV3_10161 GeneID:516328 3 GENE USP1 MGC137005 ubiquitin specific peptidase 1 EMBV3_21431 TTCCAGTACCTTCCAGCGCAAGCTCAGGAACTGTGGGTTCCTGCGAGGCTACCACCGCTT Gene GeneID:319086|OSM:NM_175713:26_cdna Constitutive 0 NULL GeneID:319086 17 GENE OSM NULL oncostatin M EMBV3_04875 TTCTGGACACAAGTTCCACCCTGCAGTCCATCATCTGCTCCAACGACGCACTCTTCTACT Gene GeneID:530939|IGSF3:XM_002686124:171_cdna Constitutive 0 NULL GeneID:530939 3 GENE IGSF3 NULL immunoglobulin superfamily, member 3 EMBV3_38624 GATGGAGACTCCATCCAGTTCGGGCGCTTCGCTGTGCTGAGACCTTGTACCATTCAGTTC Variant GeneID:509150|ETHE1:NM_001034344:160_cdna 419^548 3 EMBV3_00697 GeneID:509150 18 GENE ETHE1 MGC127386 ethylmalonic encephalopathy 1 EMBV3_34513 CCACCTGGTTTCAGGGGCTGTTCTGTAACGAGAGATTGCAGGGTCAGCACCTCAGAGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09176 CTGACACTAAGGAGCGGAGAACGGACCAGGAGAAGAACCAGAAGATGTCACCCAAGAAGA Gene GeneID:539503|ZNF296:XM_002695091:532_cdna Constitutive 0 NULL GeneID:539503 18 GENE ZNF296 ZNF342 zinc finger protein 296 EMBV3_01897 GAGTCTTGGTGGTAATGAAACAGAGCAGGACTCTATGCTCTTGGTCTATCATGTCCTCTG Gene BVV0102_382633 + 0 NULL GK000023.2:30586706-30607404 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33128 GCTCTACTGAGTGAAATTGGGGATAAGTATGGCTGTCAGAAACTGCCGAGGGTCTAATGG Gene BVV0102_063273 + 0 NULL GK000016.2:73151754-73315257 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070171 TCONS_00070169 TCONS_00070170 1 XLOC_042152 Coding TCONS_00070171 XLOC_042152 Coding Coding LOC539953 16:73313507-73364240 = TSS52164 4447 1 TCONS_00070171_5 730 15 0.91263896554443 0.00229251272518559 0.00118613882198842 0.00205582549600103 0.00165436210465589 0.00173919912879195 0.000356269155671566 0.00118657988033967 0.0015821519283025 0.00218256792591726 0.0015795062211075 1.05077760882552e-08 0.000512658092824298 0.000313040735140889 3.42311312589763e-09 0.000800231913356765 0.00464951078764317 0.00384997901549601 0.00721029329338482 0.00179738274162476 0.00163034372537431 0.00122369905833025 0.00195074555698527 0.0013746108716533 0.00351678364905545 0.00263014076948221 0.00298351841969567 0 0.000674484161099585 1.58288704968709e-06 9.15722625238992e-09 XM_003587108.2 DTL PREDICTED: Bos taurus denticleless E3 ubiquitin protein ligase homolog (Drosophila) (DTL), mRNA. 0.0 7651 100.00 0.953676635934338 NM_016448.2 DTL Homo sapiens denticleless E3 ubiquitin protein ligase homolog (Drosophila) (DTL), mRNA. 0.0 4239 81.78 0.957049696424556 TCONS_00070171_5 sp|Q3TLR7|DTL_MOUSE DTL_MOUSE Denticleless protein homolog; 0.0 1285 88.22 0.998630136986301 1 coding 1 1 0 0 -1.32152900479677 0.00295197683562285 0.00526405694753584 0.936228203650979 ACGCGCCCGGACGCCGCGGCGAGAGCCAATCAGAGGGCGTGACGTCAGTTTGGCGGGGAGTTTGGTGACCGGGGCTTACAGTGGCGGGAGTTGGAGGCATTAGCTAGTCGTGGTCTAAGGGGCGCAGGGTACAGTTTCCGCTGAATCTGGAGGCATTTCCACGGCTTTTTCCTCAGTTGAGCGTTTTCCTCCGTCCCAGATGCTCTTCAATTCGGTGCTCCGCCAGCCCCAGTTTGGCGTCCCGAGAAATGGATGGTCTTCACAGTACCCACTACAGTCCCTGCTCACTGGCTATCAGTGCAACTATAATGACGAGCATACTTCTTATGGAGAAACAGGAACCCCAGTTCCTCCTTTTGGATGCACCTTCTCTTCTGCTCCCAGTATGGAGCATATACTAGCAGTTGCCAATGAAGAAGGCTTTGTTAGGTTATATAACACAGAATCACACACCAGTAGAAAGAAGTGCATCAAAGAATGGATGGCTCACTGGAATGCTGTTTTTGACCTGGCCTGGGTCCCTGGTGAATTTAAGCTTGTTACAGCAGCAGGTGATCAGACAGCCAAATTTTGGGATGTAAATGCTGGTGAGCTGATTGGAACTTGCAAAGGTCATCAGTGTAGCCTCAAGTCAGTTGCCTTTTCTAAGTTTGAGAAAGCTGTCTTCTGTACAGGGGGTAGAGATGGCAACATTATGGTCTGGGATACCAGGTGCAACAAAAAAGATGGATTTTACAGGCAAGTGAACCAAATCAGTGGAGCTCATAATACCTTAGACAAGCAAACCCCTTCAAAACCTAAGAAGAAACAGAATTCCAAAGGGCTTGCTCCTTCTGTGGATTTCCAGCAGAGTGTTACTGTGGTCCTCTTTCAGGATGAGAACACATTAGTCTCAGCAGGAGCTGTGGATGGCATAATCAAAATATGGGATTTACGTAAGAATTATACTGCTTATCGACAGGAACCCATAGCATCCAAGTCTTTCCTGTACCCAGGTAGCAGCACTCGAAAACTAGGATACTCAAGTCTGATTTTGGATTCTACTGGCTCCACTTTATTTGCTAACTGCACAGATGACAACATCTACATGTTCAATATGACTGGATTAAAGACTTCTCCAGTGGCTGTCTTCAGTGGACATCAGAACTCTACCTTTTATGTTAAATCCAGTATTAGTCCAGATGACCAGTTTTTAGTCAGTGGCTCAAGTGATGAAGCTGCCTACATCTGGAAGGTCTCCATGCCCTGGCATCCTCCCACTGTGCTCCTGGGTCATTCTCAAGAGGTCACATCTGTGTGCTGGTGTCCATCAGACTTCACAAAGATTGCTACTTGCTCTGATGACAATACACTGAAAGTCTGGCGCTTGAACAGAGATTTAGAGGAGAAATCAGGAGGAGATAAACTCTCCATAGTGGGATGGGCCTCTCAGAAGAAGAGAGAGGTGAAAGCCGACCTTGTGGCAGTGCCCAGCAGCCAGAGCACTCCGGCCAAAGCACCCAGAGCAAAGAGCAGTCCGTGCACCTCCTCCCCGTCGTCGGCAGCCTGTGCTCCGAGCTGCGCCGGGGACCTGCCCCTCCCTTCAAATACACCTACCTTCTCTCTTAAGACCCCTCCTGCCAAGGCCCGGTCTCCCATCAGCAGAAGAGGCTCTGTGTCCTCCGTCTCTCCCAAGCCACCCTCATCTTTCAAGATGTCCATTAGAAACTGGATGACCCGAACGGCTTCCTTATCACCACCCGTCACTCCACCTGCTTCCGAAACCAAGATCACGTCTCCCAGAAAAGCCCTCATACCTGTGAGCCTGAAATCATCCCAGGCAGTGGCTTGCTCTGAGTCTAGAAATAGAGTGAAGAGGAGGCTAGACTCCAGTTGTCTGGAGAATGTGAAACAAAAGTGTGTAAAGAGTTGCAGCTGTGTGACTGAGCTTGATGACCCCGTTGAAAAGCTTCATTTGGATCTGTGCTGCCTTGCTGGTGCCCAGGAAGACCTTGGGAAGGACTCGCTAGGTCCTACCAAACCAAGCAAGATCGAAGGAGCTAGTATGAGTGTCTCTGAGCCTCCTTCTCCTGCCAGTCCTTATGCTTCGGAAGGCTGTGGAACGCTACCTCTTCCTTTGGGATCTTGTGGAGAAGGCTCTGAAGTGGTAGGCAAAGAGAATAGCTCCCCAGAGAATAAAAACTGGTTGTTGGCCATGGCAGCCAAACGGAAGGCGGAGAATTCATCTCCACGAAGTCCATCGTCCCAGACCCCCAATCCCAGGAGACAGAGCGGAAAGACTTCTCCAGGCCCGGTCACCATTACTCCCAGCTCCATGCGGAAAATCTGTACATACTTCCATAGAAAGTCCCAAGATGACTTCTGTAGTCCAGAACAGTCAACAGAATTATAGATTCTCATCTGAGTGAGTTAACTGAAGCTTGATTCATTAAAACAAGATAAAAAATTCAAGAGTGACTCTAACTCTGGTTTTAAGAAAGCTACCATTTCTTCATGTTTAGTGAAAATCGTTTTGACTCCAGAGTTTACCTAGTCTGGTTCCACTACCATAGTTATGTGCAGCTTCCTCAGAGTGAACGCTTTGTTTAAATTTCATGGAGTAAGTTTGCCACTCTGTAACATTTTGAATGATGCATCTCAAATGATGTATCTCCTGTACAGTAGTGACATCCCAGTTTGTAGAGGCAAAAAAACTAACAAGGCTTGTCTCTTCTGCTCTGAGACTGCGCAGCTGAATGCCTCTGCAGGCCACAGCAGGAGGCCTGTCTGTGAAGGTCGACTGCCGAACGGGACCCTGGGTCTCTGCTGCCTCTAACACAGTAATACAGTTTCACATAAAATATATAACCTTTCACTACGTTTTTGTGGATTTTTTTAAGTATGTGGTTAAATACGATTTTTAAGATAAGTACATTTATATTGATTCAGTATTAAAATACAATCTCTTAAGTTAAAATTATCTTTATTTTAAAAACAGCTATAAATGTCAACTTGTTGGCGAAACTAGAACACTAGCAACGTTTGTCTTTTCTCCCCCCAAATATATATCCCGTATATGATCTGAGGTTTTCAATTTTTACTAAGCAATCTACTGCGTTTCCAACCCAACTTCATGTTATGATTTTTGACATTTCCTGGAGGAAGATGTTTATAAAATCAGTAGTCATATGCTGAAGCTGGGGTTTGAATTTAGTCTTTGGTTTTTTAGGGGCTGCTACTTTAAAAAAAAAAAAAGCTATCAAATTTTAAGAAAAAGTATTGATTTCTTATTGATATTTTTATAAAAGTGTAAGTAGTTCCTATACTGAAAATCCAGAACCTAAAAATTAAATCTTTGCTTTAACTTGATCTTTTGGATTCTCTTCATATACTAAAAAGCAGTGATTGTCTAGTAGAGCCCTGAGCCAAAAAGTCGTGGAATTTTCTCTATAGATATTTAACATAGAGTATATAGATGACTCTCAGTTAATAATGTGCAAAATATCTTGAATATCTCTTACCTTAACAGTTATGTATCAATAAGCTTGAAATGAACCATTGTTTTCTATTTTAGCCCTTTGTAACCTCATAGAAACAAGCTTCATGTATTTTCTATGTACTATGTCCTTAGAAGGGAGTCCCCTTCCACTCATGAAACTTGATTCATTTTATCCATTTCCCTAAGGACTGTGTAGACTTTATTCATATATTCTGTCATTTTAAAATGTATTCTTAATTATAACTCTATAATTCCTTTGATTCTTGTAAATTAAGCTGTATCTGCGAAAACTACATAGGTCAATTAAGCATGGATTCTCCTGGTTTTATCCAAGGAGAAAAGTAAATAAAAGGCCACAGAAATGCTGTTTTTGAAACAAAGTATGGCGTAGCATTAACTGAATGTTTAAGAACTCTAGTTATATTTGATGTTTGATTTTTGAGTGTTCAACTATGGGAACGTGTTATTTATGACCAATACCTGCCAATAACACTGTCTCTCTTGATTTGAAAGCCTGTGACCCATGAAGAAGAGAACTAAAGTAGATGATTTTCTTCTTTGTGTCTCTGCTCATCTCCTGACAGCTCTACTGAGTGAAATTGGGGATAAGTATGGCTGTCAGAAACTGCCGAGGGTCTAATGGGTATAACATTCCCACTTGGAAAACTAGTACTTCAAATAGGTGCTGAAGGTCAGTGAGCTAAGGTAATAAGCTAATTATTATCCCTACTTGTGTCCCTGTCAGACTTTGAGCTGCTTCTGAATAAAAAGCCTTTTACCTGATCTGGTGTTCTTTCTGAGCTTTTGCATTAACCTAGAAGCAGTCTGTCTACACAAAAGAACTATAGTAGTAATCAAGAATCCCTTCTACTTGTTCATTGAATAAAATTTATTTATTCCCAAGGACATAATCTATCTAGCTCAGGCTGAAAGAAGTTTTAATACCTCTTGCTTGATCAGACCTTGAGC EMBV3_23511 ATGGGTGGGGAGGGGGCCAGCCACTCTGTTACCGGAATGTACAGCTTGTGGATTTTTAAT Gene GeneID:535188|CARD10:XM_002687694:78_cdna Constitutive 0 NULL GeneID:535188 5 GENE CARD10 NULL caspase recruitment domain family, member 10 EMBV3_42781 CACTGCACTCGGGAGATGAGGCCGTCAGCAGTGAAGAGCAACAGGCTTATTTTTGCTTAA Gene GeneID:506268|LOC506268:XM_002691150:180_cdna Constitutive 0 NULL GeneID:506268 11 GENE LOC506268 NULL similar to Uncharacterized protein C2orf29 EMBV3_16201 CATGGAAGGCCCGGTCTGGCAGGCGCTTTCTGGGCACAAACGGAGCAACACTCTGGCTGT Gene BVV0101_006588 + 0 NULL GK000003.2:1012735-1058466 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048812 TCONS_00166671 2 XLOC_028943 XLOC_101507 NonCoding TCONS_00048812 XLOC_028943 NonCoding NonCoding - 13:49018692-49019337 - TSS35988 645 1 TCONS_00048812_1 97 1 0 1.05470556467492e-05 0 7.41276963642213e-05 0 0 5.77690039552415e-05 0 4.58505571066637e-06 0.000272178487746958 0 8.87282004216321e-07 8.31556057528012e-06 5.93134807224284e-06 3.16030536889996e-05 3.9436128036391e-05 2.04741304973556e-05 1.28699791788864e-05 2.91754561426782e-05 0 0.000111866731292832 1.68651177652844e-05 5.75244607176062e-06 7.11165666945104e-06 0.000356952247466072 0 0.000255784860341289 3.91475823134471e-05 0 1.75618616030724e-05 5.20440340619046e-05 XR_236255.1 LOC101905928 PREDICTED: Bos taurus uncharacterized LOC101905928 (LOC101905928), 6e-08 62.6 72.52 0.178294573643411 0 noncoding 0 0 0 0 0.0425495311291958 0.704658756308425 -0.00959511421808806 0.842321262614134 CCTGGGCGTTTGGGCTCCCTAGCAGAGCCGCAGCGCAGGGGAACCAGCCCATGATCAGTGAGCTCCGGGCAGTTACTTTGGTCCCAGGTTTGGAGCCCAATGCCCGGAACGCGGGAGAGAAGAGGCTGGCTGCCGGCGGGTGCTTGCAAGGCTGTACTGGGAAGGACCGAGTGAGCTTCCACACCGGCGGAGCTCCAGCTCTGCGCCCAGGCGCGATAGCACAGAGCCCCGGCCGAGAGGCTGCTCTGTGCCGAGCGAGCCTCCCCAAGGCCTGCCCAGCTTCTGGCGTTCGCGCCCGGGAAGGAGCAGGCTGCGGGAGTGTGGGAGCCGTGAGTGGTGCCTGACTGCTGCCTCAGCTCAGCTCTCGCCTTCCCTTCGGACCTAGGAGCCAGGCGTCCTTGCAGAGGGCTTAGGGGCTGGGGGTGTGCACACTGCCAAAGCCTCCCTCGGGGAGAGCTCTTTCCGAGGGAAAGGAAGCGCCCCAGGCTGCATTCCCAAGCTGGTGCTTCCCCGCCCAGACTAAGCGCCGCACGGAGGGAATCAGGGTCCCGGTGCCCCTGGCTTGGGGAGGCAGCTCCACAGCCAGAGTGTTGCTCCGTTTGTGCCCAGAAAGCGCCTGCCAGACCGGGCCTTCCCTGGAGCTGT TCONS_00045373 . 5' 339981 TCONS_00045373 . 5' 339981 EMBV3_16461 GCGGACCGCGCAGCCGCTTGTTCTCTTCAGATAAGAGCTGCAGACAAGACCAAGAAAAAG Variant GeneID:787653|C17H5orf52:NM_001145133:77_cdna 352^460 1 EMBV3_17914 GeneID:787653 17 GENE C17H5orf52 NULL chromosome 5 open reading frame 52 ortholog EMBV3_19940 CCTCCATGAAAAAGGAAGCAAAAGTACTGAGAAGTGAAAGGCATTATCAAACAACACTAG Gene BVT0102_218277 + 0 NULL GK000010.2:58120496-58180624 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00021379 1 XLOC_012052 NonCoding TCONS_00021379 XLOC_012052 NonCoding NonCoding - 10:58157592-58158500 - TSS15269 908 2 TCONS_00021379_1 64 1 0 0 0.00021026366354047 0.000163066094704156 9.14554506257151e-06 4.34994076598926e-05 0 0 0 9.55853696513563e-05 0 0 3.15038193770143e-05 0 0 0 0.000785365153811619 1.82844653620247e-05 0.000442130373976187 3.15899098310387e-05 0 0 0.00012258814194087 0.000343520962330864 0.00108933337200736 2.2891343649698e-05 3.1037395939832e-05 0 0 9.62368083624102e-05 6.6214212247933e-06 XM_005211876.1 MYO5A PREDICTED: Bos taurus myosin VA (heavy chain 12, myoxin) (MYO5A), 0.0 1638 100.00 0.998898678414097 NM_000259.3 MYO5A Homo sapiens myosin VA (heavy chain 12, myoxin) (MYO5A), transcript 0.0 827 80.66 0.995594713656388 0 noncoding 0 0 0 0 0.522717744770794 0.0669503694546231 0.0364582829732922 0.509144969600801 TTTCCTTAGTATTGTAATGTTGCTTGAAATATTTGACAGAAAACATTTCTTTTTAGAAAAATGATTTTTGAATTGAAGTTTGTATGTACAATTCAATGCTTAGTAGGTCAGTATACATTTTCATGACATTTTTCAGAGTCAATAGTTTTAAATATCTTATTGTTATTATATGTTATAAAAACTTAGCCTACATTTCAGGGTCTCTACAACACTTGAGCCATTTAATTTTTCCAACATATGCTGAATTTTTCCTTCAAATGTGGATATATGTGTTATAATCTATGATCCTAATTGTGAATTTTTGTGGAACCCAGGAGTTATGTTGATTTTCTTGTGTCCTTGGAGAATTTAAGTTGCTCTAACAGTGTTGCATAGAAATGAACTTATGACATTTAATATTATTTTAATTACTAACTTCAATTGTCAACTTACTGTGAAATGGATATGTCTTTTAACTACCATGGCATTGAACATTGCAGTTTTTCTTTTTCCTTGTTGGATCTGGAAAAGGAATTCTACTTTGACCTACATGGAAAAACATGATCTAGTTAATCTTTGAAAAGTTCTTAAGTGAAATATTCCTCCATGAAAAAGGAAGCAAAAGTACTGAGAAGTGAAAGGCATTATCAAACAACACTAGTTTTAAACTAAACCCACCCCAGCATATGTCACATGAAATTTTAAAAAATAAGTTAATAATGCACCTCATGTCAACAAAAGCCTTTGAAACATGGGTTTTCACTAGATACCACCTAGTGCTAAGATGAAAACCAAAACAATATCAGATAGACATTTATGCTCTAAATTTGTAGTTGTCTGGTGTTGTACTTAGTAAATGTGTGTCATTAATGCTGTATTCTCCTAGCTATTAAAGAAAATTGTTCAAATAAAGATATGGATGTAAAGGA TCONS_00014160 TCONS_00014163 TCONS_00014164 TCONS_00014165 TCONS_00014166 TCONS_00014167 TCONS_00014168 TCONS_00014169 . 3' 96 TCONS_00014160 TCONS_00014163 TCONS_00014164 TCONS_00014165 TCONS_00014166 TCONS_00014167 TCONS_00014168 TCONS_00014169 . 3' 1003 EMBV3_17783 GTCAAAAACTACAGGTTTCACACCAAGAAGGATCCGGGGTGTTGGAACAGCAGCTCTGAA Variant GeneID:281865|IMPA1:NM_174361:9_cdna 508^616 3 EMBV3_35093 GeneID:281865 14 GENE IMPA1 MGC140630 inositol(myo)-1(or 4)-monophosphatase 1 EMBV3_08951 CTCCCTGTGTGGCTGGTGACTCAAAACTTCTCCTGTTGTCCAAGCCATGTTGGCAGTTGT Gene BVT0102_119888 + 0 NULL GK000014.2:49830428-50151654 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053487 1 XLOC_031744 NonCoding TCONS_00053487 XLOC_031744 NonCoding NonCoding - 14:49881327-49884159 - TSS39442 633 2 TCONS_00053487_1 45 2 0.777110561638997 0.00105320543338085 0.000380982104051257 0.000996986381770431 0.000457384066641937 0.000452379539594974 0.00104542781443539 0.000608045578307166 0.00072415524686233 0.00137111352547966 0 0 0 6.34595484180432e-05 7.43126767784499e-06 0 0 0 0 0.000475795162616091 0.00104519996949646 0.000484373232958759 0 0 0 0.000324759622204507 0 0.00044429593136468 0 0 0 0 noncoding 0 0 0 0 -1.25393152440199 0.0315979590004731 -0.0481232945653412 0.351313361486764 AGAACAAAGACTGTCTGGCTAAACTGGGAAAGCTAAGACATCCACATAGATCTTGGGCTGGCTGGGAGGCCAGGACCCACCACCATGCCAGCCCTCTCCTGAGAAGAGGAGAGAAGGCCAGCACCTGGATCCTACCTGGAGACCACAGGGACACCCTGTCCCGGCCTCGAGTGGCCGCCCGCCTCCACCCGTACTGAGGGACTTTCCCCAACCTCCGGCTCCCTGTGTGGCTGGTGACTCAAAACTTCTCCTGTTGTCCAAGCCATGTTGGCAGTTGTCAAGTGTGATGAGAAAGCCCAGTGCTCTCTAAGACACGCTCTCTTTTCTGGACTCTCCCAGGAAGACATGTCCCAGTGTCCCTGCAGCCATGGGTGGTCATGTGGCAGAACTCTGGGACACTAGAATATGGAGAAAGTGTGAATCTGGCCTCGAACATCCCTGGTGAGGACCTCCACGCCCACTGCCTCCCCTCCCAGCCAGATGCAAAGGATCCAGGGAGTACCCAGGACCCCTGAAAGATGGTAGGGCCACTGGGGAGAAGCCTGGTTCCCTAATCACCACAGAGACGGCCAACCTGCCAACACTCTGTTGGATCATGATATGTGGGAAATAAAGTTTTAACTGAGTCCAGCC TCONS_00051917 TCONS_00051920 r 3' 4068 TCONS_00051917 TCONS_00051920 r 3' 4438 EMBV3_38403 CACGTGTCTTATCCCACAGTTCCGGAGGTCAGAAGCCTGACTTGAGTCTTTGGTCTAAAA Gene BVT0101_066191 + 0 NULL GK000021.2:67604768-67941852 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125432 1 XLOC_076974 NonCoding TCONS_00125432 XLOC_076974 NonCoding NonCoding - 21:67788010-67790233 - TSS94191 2223 4 TCONS_00125432_3 52 0.614035087719298 1 0 0.000416188271149438 0.000284772810742497 0.000183165033336541 0.000156893996873586 0.000701820908941668 9.65469993027591e-06 0.000249217913439973 3.72497398261274e-05 0.00014729671577961 0 0 1.12594606096835e-05 1.93608890282896e-06 0.000250399611511424 5.07613902480723e-05 0 0 0 0.000311827256832286 6.14652836819651e-05 0 0 0 0 0.00010596870604795 5.38790242394414e-05 0.000208459385021436 0 0 1.3522815000156e-05 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 3e-56 224 83.11 0.0935672514619883 0 noncoding 0 0 0 0 GGTCAGGCCCCCACTTTTGAGACAGGTCATCTCAGGGGCTTCACCTGGCTTCCCTGAAGCTCACGTCCCTCACCTGTGAAAAGAGGAAGCGATGCTCTCAGAGGCCAGCGATAGGAGCCAGGAAGAAAACGAGTGGAAACGTCCGAGAGAGCATCTGGTCAGATGGGGCGAGCTCCAGGCACCTGCTCCAATGATATAGAACTCCATCATTAAGTTAGGAGTCGTCATTCTTTCCTGCTGTGATGACCTGAGCCAAGAGCTGGGAAGCATCTTGGGAACTGTCTGCCCTCCCTCCCCTCCTCTGGGGAAACCACGTCTCAGGCCAAGAGGCTTCTGTGGTCAACAGAATAAAGCCCCCACTCCAAGACGTGCATATCCTAATTCCAGAATCTGGGAGTATGCTAACTTACATGGAAAAGGTTCGCTGCGGAGGTGATTAAATTAAAGATTTTGAGATGCATTATCATCGTGGATTATCTGATGGTCCTGATCCAATCACACCCCAGCCCTTAGGAGGGGAGAGGCTTTCTTGGCTGCGTAGATGAGATGAAAGAAGAAGGGGCAGAGACGTGTACCCTGCTGGTTTTGAGGCTGCACGAAAGGACCACAAGCCAAGGCATATGGGCACCTATAGGAGCTGGAAAAGGCGAGCAAACAAGTCTTCTCCCCGAACCCCCAGAAGAAGCACAGGCCTGCTGACACCTTGATTTTAGACCAAAGACTCAAGTCAGGCTTCTGACCTCCGGAACTGTGGGATAAGACACGTGTGCTGTTTTAAGCCACAGAGCGTGTGGGGACTTGTTACAGCTGCAACAGGAAACTTGCTTCTCTTTTCTAAGTAACTGACAAAGTCCATGTGCCGTCAGAACCACGGCCAGGCTCCTGGCTCCCAGTCCCAGGCTTGTCCCCCAGAGCTCTGCGTTGTTTTCTCCCCAAAGTGGTTTTAGCAGCTGGCACACCCCCTCTTCTTCCCAGGAGCTTACAGCATAGACACTCATCATTTCTCCCAGCACATGCTCACTCATTCATCCACTCACTATTCAGCAGGTATCTGCTGGGCTTCACTGGTGGCTCAGTGGTAAAGAATCCACCTACCAGTTCAGGAGATGCGGGTTCCATCCCTGGGCCGGGAAGATCTCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCCCACCTGAACAATCCCATGGACAGAGGAGCCTGGTTGGCTACAGTCCATGGGGTTGCAAAAGAGTCGAACACGACTGAGCGGCTAAACAACGCCTGCTGGATATGCCCTCTGCATAGGCGCTGTCCTAGGCACCGAGGTCACACAAAGTCACTTTCCAGCAGCTCTCGATCCTGAATGCCCCTCACGATGAAGCCCTCAAGACACCCAGAGGCTCTGGGCAGGCTCAAAGGCTGGATGGACAAATAAAGGCTGGTCTACCTGTACAACGGAATATGATGTAGCAGTGCAAAGGAAGGAAGTGCCACACGGATGAACGCTGACAACATGATGCTAAGTGAAATAAGCCAGACACAAAAGCCCACATGTATGATTCCATCGATATGAACTCTCCAGAACAGGAATCTCCATAGAGTTAGCAAGTAGATGAATGGGAGCCAGTGGCTAGAGGGAGAAGGTAGGGAGTGAATCCTTAGGAGGAATGGGGTTCTGTAGGCAAGGGTTTCCCAGAGAGACAGCACGAGGAGAACAGAGAGAGAGACAGGGATTTACTATGAAGGCTTGGCTCGCATAATTCTGGAGACCGAGAAGTCCCAAGCCTGATGTGTGTTAAGCTGAGGGCCCAGAAAATGGGTGGCATAGTTCCCAGAAGGGCCAAGAACTAGGAGCATCAATGTCGGGGCAGGAGAGATGGGAGAGCAGGGAGAGTTCACCCTTTCTCTGCCATGATTGTCTTTCCACGCCCTCCCCAGACAGGGAGACGCCCGTGCGCATTGGTGAGGGCAGGTTTCTCCAGTCAAGTCACCCATGCAAACGCTAATCTATTCCAGAAGCATCCTCGCAGACACACCCAGAAATAATGTTTTCAACAGCTGTCCAGGAATCCCAGTTGACACTTAAAATCAACCATCACGGGGGGTTTCATCTGGGGGGATAAAAAAAGTTTTAGAATCAAACAGGCAGAGAAGCAACGTGCATCTGGTTAGCTGTGTCCCAGATGCATTAAGGGGTCCACAGGGGGGGCTGTGGGTCCAGTGGCGGGTGGGCACCCT TCONS_00121890 TCONS_00121891 TCONS_00121892 TCONS_00121893 TCONS_00121894 TCONS_00121895 . 3' 151620 TCONS_00121890 TCONS_00121891 TCONS_00121892 TCONS_00121893 TCONS_00121894 TCONS_00121895 . 3' 153842 EMBV3_34689 ATGCCAAGATCAGGCCTGGGACCAGGAAAGATGATTCCCCCACCACCTCCCATATGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30879 CTCTAAGTGTATGATCAGACGAAACAGTGACAGTACACTCACGGGCGGTTTCGGAGAATG Gene GeneID:535248|CCDC132:NM_001105413:51_cdna Constitutive 0 NULL GeneID:535248 4 GENE CCDC132 MGC159591 coiled-coil domain containing 132 EMBV3_23266 GAGTTCTCTTTTCTTTCTAATCATATACAATGCCAACTTTTTAGATGTAGCCATGTTCCC Gene GeneID:507159|BBOX1:XM_002693487:120_cdna Constitutive 0 NULL GeneID:507159 15 GENE BBOX1 MGC165687 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 EMBV3_21609 TCGGTGAGGGTCAGTAGGAAGTCATTGGACACTCCTGGATCTGAGGCAAGGGACAGAAAA Gene BVV0102_111729 + 1 EMBV3_24164 GK000013.2:56874837-57056585 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045679 TCONS_00045681 TCONS_00045678 TCONS_00045680 TCONS_00045682 1 XLOC_026502 Coding TCONS_00045680 XLOC_026502 Coding Coding CDH26 13:57053912-57103067 j TSS33282 5249 1 TCONS_00045680_5 652 0.195846827967232 16 0.893538674370346 3.92145898463338e-09 3.02163994119475e-11 4.44607007181066e-06 2.66653842717115e-05 3.10822856491435e-05 2.13790150055727e-15 4.41340287034767e-06 7.41489243675697e-06 1.4294035473248e-19 5.14189020540816e-07 1.66300055036594e-05 3.38184146053195e-06 1.15503065079993e-14 1.80907600837138e-11 1.08139547792805e-06 0.00122152227095615 0.000198901561616959 0.000144837029515721 1.56361045078796e-14 6.0010969867981e-06 1.67509029753206e-16 0.000212834279757661 0.00039202870483828 0.000213562175955833 2.04368839299361e-05 6.0996552053788e-05 1.07131472837807e-11 8.37257404930338e-05 9.7747347134912e-05 0.0005700386630835 XM_005194397.1 CDH26 PREDICTED: Bos taurus cadherin 26 (CDH26), transcript variant X1, 0.0 3530 100.00 0.372642408077729 NM_177980.2 CDH26 Homo sapiens cadherin 26 (CDH26), transcript variant a, mRNA. 0.0 1494 77.71 0.358544484663745 TCONS_00045680_5 sp|Q8IXH8|CAD26_HUMAN CAD26_HUMAN Cadherin-like protein 26; 0.0 899 71.64 0.921779141104294 1 coding 0 0 1 1 0.0588222697556163 0.606898069209308 0.0050183743986609 0.92172380894955 GAGCCTGCTGGGAGAGAAGGGCCCAAGCCGGGAGGACTCGCATCGCCCGCAGGCTGCGGGTGCGCACCAGGCAGCATGTGCTCCAGGGTTCACCCCGAGCTGCTGCTGCTTCTCTCGCTGCTGATGCTGGTCAGCACTGTCAACAGTACCCGACAAGAAAACGATGATCTTACTAATCAAACAAAGGGAGACAGCCGGCTTCTACGGCGATCCAAGAGAAGATGGGTTATTACCACGTTGGAGCTGGAAGAGGAAGACCCGGGACCCTTCCCGAAATTTGTGGGTGAGCTGTTCAATAATATGTCCGCTAACATGGAAATAATATATTTAATCAGAGGACCTGGTGTGGATGAATATCCAGAGATTGGTTTGTTTTCTATAGAAGATAATGTGAATGGGAAAATATATGTTCACCGCCCTGTTGATCGAGAGAAAACACCGTCTTTTAAGGTTTATTTTGATGTTGCCAATCGCTTAACAGGACACATCGTAGATAAATCCTTGATTGTCAACATAAGGATCAAGGATGTGAATGATCATGCTCCTGAGTTCCCTGAGAAGGAATTTAACATCAGTGTGAAGGAGGACCACGCTGCAGGTCAACCTGTTTTTCAGATGTCAGCAGTGGATCTGGATCAAGAAAATACTCCAAACTCTCAAGTGCTTTACTTCCTTGTTTCTCAAACACCCGTACTGAGAGAGAGTGGTTTCCGGATTGACCGTGTTAGTGGAGAAGTGCGACTGTCAGGATGCTTAGATTATGAGATGGCGCCTCGGTTTACACTACTCATTGAAGCGAGGGATTGTGGCAACCCGCCGCTGTCATCCACAGCCACTGTTCATGTACACGTGCAAGACAGCAACAACCACATGCCCAGGTTCACCCAGGACCACTATAACGTTCAGATTTCAGAAGGCTGGGCCAGCCAGGGTGTGTTACGTCTCGGGGTTCAAGATGGTGATTCACCATCTACAGCAGCGTGGAGAGTGAAGTTCAACATAACGAATGGCAACGAAGAGGGACATTTTCACATTTCAACAGATCCTGAGACCAATGAAGGGATTTTAAATATTATCAAGCCTTTGGACCATGAGACTCAGGCAGAGTGGAACTTGGTCGTGGCTGTGGAGAACGAAGAGCCACTCTTCTCGTGTGATGCGGGGCAGCTGCAGAGGCCCCGGCAGGCCTCGGCCAGCGCCACCGTGAGTGTGTGGGTGACCAATGTCAACGACCCGCCCACCTTCCACCCGGGGACCTTCATCGTCAGTGAGGTCGATGGCGCAGGGCCGGGGACTCAGCTGGGAATGTTCAACGCTACAGATCCAGATAGAACCGCCGCCGGCCAGATAAGATACAAACTGGCTTATGATCCTGCAAACTGGGTCAGCATAGATGAGCGCTCTGGGGTGGTCATCACTGTGAAGCCGGTTGACCGCGAATCTCCTCATGTCAATGACAGCATTTACGTAATCATCGCTCATGCTGTTGATGATGGTGTCCCTCCGCAGACGGGAACCGGGACCATGCTGCTCTTCCTGTCAGACGTCAACGACAACGCTCCCACACTCCGCCTGAGCTCTCAGCACCTGGAGGTCTGTCAGTCTGCGGGAGATAAGTCCCTCCTCATTGAGGCGGAGGACAGCGACCTAGAGCCCTACTCCGACCCGTTCACCTTCAAACTGGACAGCACGTGGGGAGACACAGAAGACATGTGGAGACTGGGGGAAAACAGGGGTTGTTCAGTGGAACTTCTAATGCAGAGAAGCCTTCCACTTGGTGACTACTCTGTGCCGCTTCTCATCGGAGACAAACAGGGACTTTCCCAGAAGCAGACTGTCCACGTGAGGGTCTGCTCCTGTCCCGATGGATTCACCTGTGCGGAGCCCCTCATCGCGAGAGCTGGGGTCATGAAGGGCGCCCTGGCCCCTCTCTGTGTAGCATTCATGGCTCTGGCAGGGAAGGTCATACCTCGGGGATCACATGCCAGCCCTGTCCATCAGCGCAGCCCAGGCGGGCGCCAAGCTGGGAGCTAAGGGTCATGGTGTGTTTTTTGAACCAAGTGTGAGAAACAAATACTCTACTCCTGTTTGCCTCAATACCGTGGTGCCCAGAGGACCCCTGGAAATGAGAGCAGGAGTGATGGCAAAGGTGCTGAGTCAGCAGCTCTGTGGCACCCGTGACCCTGAGGGTGATCCTGGCTACCCACCTCATGTCTACGCAGAGGAGGGCGAGTGTGAGCAAGCAGACAGCCTCAGCTCTCTCACCTTCTCTGAACATGACCTACCACCCGACGTGCTGGACTCTTTGGGGCCAAAGGCTGCTCCACTAGAAGAAATATATTCTCAGTCAGCCTTTCGTTCCTAAAAAATGCATATTTTGGTGAATTGGAATAATTCACAAGGGGAAATCACTATTCTAGAATGCCTTTTTCCTTTTGTTTTTTAAAAATTACCTTCTAGTTTTTTTTTTTAATTTCTTCTAAGTCCTTGTTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGAGTTTCATCTACTAAAAAAAAAAAAATATTACCTTCTAGTTCTAACAGAATGAGGGTAAACTGAGTCTGGATTAAATGATTCGACATTCTGGGACCTCTTGAACCAAAACAAAACAGCAGGTCATACTTTTTAAAAAATTTGTCAGGCATATTTTCTAGAGAAATTTGAATTTAATTGTGTAATTCCTTGCTTCCATGAGCAGCCCAACTCCGAGACTAAATGAAATATAATCCACAGATTACCCCAATTATTTGAGAACAACAGATAATGCTGGGGAAAACAACAGGTAAAACTGGGAAAAGATTTTTAAGTGCTTACTTAAATTTCTTTATTATGGTTCTGCTTCAGTTTAAGTGAAAAACAATAGGGTAATATTTTGTAGAATATTTGCAATTAGTATTTTTAGTGATTTTTAAAAATATATTAGTCCCATTGCACTTTTTGAGTAGATAAATAGATAAAATTTATTACCATAAGAGAAATAATTAAAACTTAAAACTTTATGAGTGGTAAATATTTAAAAAAACTGACATAATTTAACTTGCATATACTATGTAAATATATTAAAATAACTTAGGAGCCTTTGAGTGACTCAATTCTGATTAAATTCTATTTTTATACAACATCACAAACTTTAATTGATTTTTACATGTCCACTTATCACTAGTGTAAACTGTGGGGGAGGTGATAGTGTCCTTTATCTAAAAAAAAAAAAAAAGTAAATAGTAGGACATGTGTCTTGTATAGACTGTTTTCTTGGCTGTGTAATATATAAGAAACTGGTTAAGCAAAATTTTAAAAGATACCAGGGCACTTTAATGTATATATTAGATATCTAAAAGCCTATGGCAAATTCTAAAAAACATTATATAATTAATGAGCATACTCTTTTGTGCACATCCTCCTGAATTCGAGTCCAACTCTTTGTGATCCTATGAACTGTAACCCACCAGGCTCCTCTGTCCATGGGATTTCCCAGGCAAGAATACTGGCATGGGTTTCCATGACTTCTTCCAGGGGATCTTCCTGAGCCAGAGATCAAACCTGTGTCTCTTACATCTCCAGCACTGGCTGGCAAGTTCTTTAACACTAGTGCCACCTGGGAAGCCCCAAGTTTTAGCTGATGCAGAGTTAAAACTTTTCTTTCTAAAGAAGCTGTGGAAATACTGAAAGAGATCACAAGAATTAGTACATAGTCATTTCATGTGTCACCTAGTGCATTGGGTAACTGAAAAAGAAGAAAACCATCTCCAAAGGATTGGAAAGTCTAAAACTGGCTCACAGTTGTGTAGAATAGCTGTGCTAATTCTGGAATGATTCTGAGGAGAGCCTACGATGTTTTCTGGGGAATTCAGGATTCCCATCTTAGTCCTATCTTAGAACGGTATACTTCTTGAGTCTGAATGATTGGTGAGGGTCAGTAGGAAGTCATTGGACACTCCTGGATCTGAGGCAAGGGACAGAAAACTATGGCCATGGGGAACATCTGGCCCACCATCTGTTTTTGTAAATAAAGCTTTATTGGTACACAGCTGTGCTCATATGTTATTTAAGGGCCATCCATGACCACTTTGTGCTTCCATAGCAGTGCTGAGTAATCATGATGAAGATATATGGCTCACAAAGCCCAACACATTTACTTCCTGGCCTTTTAAAGAAAACAAGAACACTGATCCCCTTGTCTAAGGCATTCTTTTTAGGAACTCCGCATCTTATCTAATATTTAAATATATCCATAAAAACTTAAAAGTGAAAGTGTTAGTTGCTCAGTCGCATCCAACTCTTTGCAACCCCATGGACTGTAATCTGCCAGGCTCCTCTGTCCATAGAATTCTCCAGGCAAGAATATTGGAGTGGGCGACCCTTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCGGGTCTCTTGCATTGCAGGAAGATTCTTTACCTCCTGAGCCATCAGTGAAGCCCAAATATATCTATACTCTGTGTTAAAGTCAAATACATTGCCGTACAACTCTGATAGGTTTTCGATAAGTTTGCTTTTGGCTGTAGGTAACTTGATTCCTTTACTAATGGTTATGAAATCTTGGCAGTTGTGCCTATTAGTGCATTCTTACATTATGAGGCTCTCTCCCACTAATTGTTCTCAAAAGTAGTAAAATACTCATGAAAAATTCAAGAACGTGGAATTGAACAATTAGCAAGAACAAAATGTTATATTTTGTAGATATTTAATTAGACATTTATTAATTTTGATTTTGCTGTTTTCTTTGTGTATTCTGAAGCCTGTATATATGTTTTTGTAGGTCTTGAGCCTTTGGGGTATATTGTCCAGTGGAGACACTGGCCCTGTTGGCATGTTTATGAAGCCCACCTGGTATAATGCTTTGACTTTCCCCTTTAGATTCCAGTCTATGTTGTATATTATCACCTGCCCCAACTGACGTCTGCAGGGAGCATTCTTGAATATTGGCTGGTTCTCCCCATAGGTTGATTCCCAGGTCTATCTCCATGCTTTAAAAGGTTTCCATTAGAAACAGCCTCACCAGGAAGTTTTGGGAAAAAAAATGTTAGCCTCCAGTGGAATTTATGTACACTCGTGAATGAAACCAAGTCTTACTAATGGCAATGAAGAAGGCAATAAAACAGAAATAGTAAATATTTTCCTAGAAAATGTGATTTTTTTTAAGAACATTAGCCTCCAAATTACTTAGCAATCCAAAGATAGC EMBV3_02953 CGAGGCCTGGAACATCAACTCCACCGACCTGGTGGAGGGCAGCTCGGCGCCCGAGCTCAA Variant GeneID:539414|RAI2:XM_002700371:15_cdna 135^284 1 EMBV3_19863 GeneID:539414 X GENE RAI2 NULL retinoic acid induced 2 EMBV3_38926 GTACATCAGAAGACACACACAGGGGAGAAGCCCTATGAATGTTATGAATGTGAGAAGGCC Gene GeneID:100138488|ZNF37A:XM_002698817:17_cdna Constitutive 0 NULL GeneID:100138488 28 GENE ZNF37A NULL zinc finger protein 37A EMBV3_30140 TGAGAGCTTGGCACGGCTCCATTCAAACTACTACAAACACAAGTACCCTCGCCCCAGAGA Gene GeneID:521960|IP6K3:NM_001040542:137_cdna Constitutive 0 NULL GeneID:521960 23 GENE IP6K3 IHPK3 inositol hexakisphosphate kinase 3 EMBV3_07916 GCGGAGTTCATCAGCACGTATGTCATGATGGGGCCCATATGAATGCGGCCTTGACCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06234 TTGCAAGACGGAGCTCTCTGGAAGAACGTGACAAAACCATATACCATCGTTGAAAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00519 GATCCCCCACAACCACCACTAACCTACTTAACAAAGTCAATGTGAGTCTACCAAGCTTTG Gene GeneID:522429|ANKRD40:NM_001101109:109_cdna Constitutive 2 NULL GeneID:522429 19 GENE ANKRD40 NULL ankyrin repeat domain 40 EMBV3_09683 CTGGGTGGGGATTGCCTCACAGATTATCATCGCATTAATCCTCTCCTATGGCCTTGGAAC Gene GeneID:530703|ATP12A:XM_002691870:193_cdna Constitutive 0 NULL GeneID:530703 12 GENE ATP12A NULL ATPase, H+/K+ transporting, nongastric, alpha polypeptide EMBV3_25811 CCGGGACCCCTCCCTCAGTAACCCCACTGCTTCCCCCTCCTTGGTATAAGTGCAATTAAA Gene GeneID:789747|LOC789747:XM_002688751:105_cdna Constitutive 3 NULL GeneID:789747 7 GENE LOC789747 NULL similar to MHC class II regulatory factor RFX1 (Transcription factor RFX1) (Regulatory factor X 1) (RFX) (Enhancer factor C) (EF-C) EMBV3_11183 CCCAAAATGCTACGGGGCAATGACAGCTCACTTCCATGAAACAATAATCCAATCCAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26662 GTCTGTCAATGTTTGGAGAGGTCGTCTTCCATTTGTATGGTGCTAGGGACAGGTAGGACC Gene GeneID:785776|LOC785776:XR_084607:47_cdna Constitutive 0 NULL GeneID:785776 18 PSEUDO LOC785776 NULL similar to WW domain-binding protein 7 (WBP-7) (Myeloid/lymphoid or mixed-lineage leukemia protein 4) (Trithorax homolog 2) (Lysine N-methyltransferase 2D) EMBV3_13297 TGCTCGCATCGCAGAGGCGCTAGCTAGACTGCGTCTGTAGCAGGCTATGTTTGTTTGAGA Variant GeneID:509221|DAB2:XM_002696368:66_cdna 508^614 3 EMBV3_38426 GeneID:509221 20 GENE DAB2 NULL disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) EMBV3_22086 GTTAACTGCCTGAGGAAAAATCAGGTCTGGGGTCTTCTTTGGGATTTGGGAGGAGTCTGG Gene BVV0102_178278 + 0 NULL GK000018.2:52994979-53021417 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083997 TCONS_00083998 1 XLOC_051422 Coding TCONS_00083998 XLOC_051422 Coding Coding PVRL2 18:52984222-53018674 j TSS63009 3865 1 TCONS_00083998_4 539 0.202069857697283 9 0.888072915154858 9.80476752605636e-18 0 4.3754829304734e-08 0 0 0 1.80305401509533e-05 2.02466486434964e-33 9.59358415942029e-12 8.20309763895729e-05 1.06100371838725e-08 1.05953414525282e-25 1.37119387391159e-08 7.69634223522334e-12 2.12527574716365e-15 0.0107947866921501 0.000187820904523848 0.00549651462913806 0 6.9092098150533e-12 0 0.00175373670593678 0.00115693329889814 0.00487632682953878 2.85650300166575e-12 0 3.94133265545938e-05 0.000110742968525729 2.31774608353499e-08 2.85847749901775e-08 XM_005219196.1 PVRL2 PREDICTED: Bos taurus poliovirus receptor-related 2 (herpesvirus entry mediator B) (PVRL2), transcript variant X1, mRNA. 0.0 4785 100.00 0.686157826649418 NM_001042724.1 PVRL2 Homo sapiens poliovirus receptor-related 2 (herpesvirus entry mediator B) (PVRL2), transcript variant delta, mRNA. 0.0 2280 79.61 0.666494178525226 TCONS_00083998_4 sp|Q92692|PVRL2_HUMAN PVRL2_HUMAN Poliovirus receptor-related protein 2; 0.0 725 78.19 0.998144712430427 5 coding 1 1 1 1 -0.00185959498147255 0.990336724080927 0.0507578933264036 0.59688482799681 AGTCCGAAGCCAGAAAGAATCTAAGGGCCAGGGGCGCTGAGCCCGAGAACCGGACCTCGGCAGCAGAGCCGAGAAAGCCGAGCGCCGCGGGAACCGGCCGGCAGCCGAAGCCACTCAGGCACCTACTCGTCTGCCCAGTCGATTGGCGCACGCAGAGTGGCCCTCAGGCCCCTGCCCGGGCCCAGTCCCTCCCCGGGACCCCCATGGCCCGGGCCGCAGCCCTCCGGCCGTTGAGATTGTCGCCGCCGACGCTGCCTCTACTGCCGTTGCTGCTGCTCCTGCTCCGGGAAACCGGAGCCCAGGATGTGCGAGTTCAGGTCGCCGCTGAGGTGCGGGGCAACCTGGGGGACACGGTAGAGCTGCCGTGCCACCTGCTGCCTTCAGCGCCTGAAATCCGAGTGTCCCAGGTGACGTGGCTGCGCCTGGACGCGCCCGAAGGCAAACAGAACGTGGCCATCTTCCACCCCCAGTATGGTCGCAGCTTCCCCAGCCCGAAGCCCGGCAAGGAGCGGCTGTCCTTCGTCAATACTGCGCCGAGCTCGGGGGCCGGGCAAGGCTCGGAGCTGGAGGTGCGGGACGCCACGCTGTCCCTCCGGGGGCTGACGGTGGAGGACGAGGGCAACTACACTTGCGAGTTTGCCACCTTTCCCAAGGGCACCAGTCGGGGAGTCACCTGGCTCAGAGTCATAGCCCAGCCCCAGAACCATGCCGAGAAACAGGAGGTCACATTCAATTTGGATCCTGTACCCGTGGCCCGCTGTGTCTCCGCGGGTGGCCGACCACCTGCCCGGGTCTCCTGGCTCTCACCCTTGGACGGGGAGGCCAAAGAGACCCAGGGGTCGGGGCCCCTGCCTGGCACGGTCACCGTCACTAGCCGCTACACTGTGACACCCTTGAGCGAAGCAGACGGTGTCAAGGTCATCTGCAAAGTGGAACATGAGAGCTTCCAGGAGCCCAAACTGCTGCCAGTGATTCTCTCTGTGCGCTACCCCCCCCAGGTCTCCATATCCGGCTATGATGACAACTGGTACATCGGCCGTAGTGAGGCCACCCTGAACTGTAACGTCCGCAGCAAACCAGAGCCCACGGGCTACGACTGGAGCACGACTTCCGGTGTCTTCCCAGCCTCAGCAGTGGCCCAGGGCCCCAAGCTGATCGTCCACTCAGTGGACCGGCTGTTCAACACCACCTTCATCTGCACCGTCACCAATGCCGTGGGCACCGGCCAAGCCGAGCAGGTGGTCCTCGTTCGAGAGACACCCAACACAGCCGGAGCAGGGGCCACAGGGGGCATCATTGGGGGCATCATCGCTGCCATCATCGCTACTGCTGTGGCCGCCACGGGCATCCTGATCTGCAGGCAGCAGCGGAAGGAGCAGAGGCTGCAGGGGGCAGAGGAGGAGGAGGAACTGGAGGGACCTCCCTCATACAAGCCACCGACCCCAAAGGCAAAGCTGGAGGAACCAGAGATGCCCTCCCAGCTCTTCACCCTGGGGGCCTCGGAGCACAGCCCACTCAAGACCCCCTACTTTGATGCTGGTGTCTCATGTGCCGAGCAGGAAATGCCTCGATACCATGAGCTTCCCACCTTGGAAGAGCGGTCAGGGCCCCTGATCCTTGGGGCCACAAGCCTGGGGTCCCCCATCCTGGTGCCCCCAGGGCCACCTGCTGTGGAGAGAGTCTCCCTGGATCTAGAGGACGAGGAGGAGGAGGAAGACTATATGGACAAGATCAACCCCATCTACGATGCCCTGTCCTACTCCGGCCCCCCTGAGTCCTACCAGGGCAAAGGCTTTGTCATGTCCCGGGCCATGTATGTGTGAGCCACCGTGGCCTTGCCCTTTCACCTCTCATTTTTTTATATCTTAACTTTCGTCAGGGACCTAGGGTCCCTGACCTCGGGCCCAGCCACTGTCAGTCAGCACACATGCGTCTCATCTTTGACTTCTATTTTGGTGGCTCCACTGTGACCTCTAATCAATGATCTCTGATTCAGAGAAATTGGCCATGACAATGGAAACCTGATAACCTTAGGAGGGGCTAGAGAAGGTAGGTTTCTGCACAAACTCTTACCCAAGGATTCACCAGACATAGATTATACCTCTCACGACGCACCATCTCCAGACTCCTCCCAAATCCCAAAGAAGACCCCAGACCTGATTTTTCCTCAGGCAGTTAACTCCTACTAGATATGCTGGGGTGGGTGTTGGGGACATCCTGCTGCTCAGACCTGAGCCCTCCAGGCAGCAGAGCCTCTGTCACCCATTCCCCACCCTGTCCCCTAAAGGTAGAGGGAGGGGATTCCCCAGCCCAAAGAGGAACTTCCCCATCTCCTCCCTCCTGCAGGCAGGAGTCTCAGGGTACTGACCCTTCTTCCCTGTGCCCCCAGTACCCCAATTCCTGTCTCCAGAGAATTAAGACCCAGCTCAGGGCTACATGGGGTGAGCCTCATGCAGAGTGTGCCTTGCTGATGCCAACCTTGGAAGAAGAATTTGCTGTTACTTTGAAGACTACTGAGTCCTTTTACTCCTGCCCAGTGGGATTGGACCCAAACATCTCCCTGGGGTTGGGGGGAGAGTGGATCACCTGGGTTAGGGATAGGGGATGTGGCTGTTAATATAGCATTTCCTACAAAATATGAGTTTGTACTTACCAGATCTCAACTGGTGTTTTCTGTGCGCTGTTTAGGGGATAGGGGTGGAACATAATGGGTAATGAATGGGCAGCAGGGCAGGGTCCAGGCCTTGAGGGAATCAGTAGACTAGAAGTTAAGATAGGTTACAAACAAAAAGAAAAGGACCAAAGATATGAAAAAGATAAGTGAGGGGATAATGAGCAAAAATGCATAAGCCATGGTTAATGGAAGGAGCGGGAGGAGTCCAGGGCATAAGGAAAAATAATCTACAACAGCAGTATAATGGGTAATGGGCAGAAATAAACAGAACAAAGTAGAAATAGCAGTAACTAAGTACAAGGGGCAGGGGTGTAATGATTAAGAGTAGGCCAAAGGCAAAATTATGAATAATGTTTTGATAGGAGCTCAGGGCATGATGGGCAATAGATCTCAATGAATGAGCCAGGGGTCGGTCAGTTCAGTTCAGTTGCTCAGTCGTGTCCGACTATTTGCGACCCCATGAATCGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTTACCCAAATTCATGTCCATCGAGTCAGTGGTGCCATCCAGCCATCTCATCCTCCGTCATCCCCTTCTCCTCCTGCCCCCAATCCCTCTCAGCATCAGTCTTTTTCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTATTGGAGTTTCAGCTTTAGCATCAGTCCTTCCAATGAACACCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGACCTCCTCGAAGACCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTTGGCGCTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGATGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATACTATCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAATCACCATCTGCAATGATTTTGGAGCCCAGAAAAATAAAGTCTGACACTGCTTCCACTGTTTCCCCATCTACTTCCCATGAAGTGATGGGACCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAACCTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTCTTTAGCTCCTCTTCACTTTCTGCCATAAGAGTGGTGTCATCTGCAT EMBV3_04183 AGGCAGGATGAGCAGCTACAGAAGACAAAAGCCAAAGATGTCTCCCGCATGCGTTCTGTC Variant GeneID:281078|CLTA:NM_174022:8_cdna 562^768 7 EMBV3_08894 GeneID:281078 8 GENE CLTA CLTA2 MGC140767 clathrin, light chain (Lca) EMBV3_15896 GGATTGGCTGTTTGTGAAACTCCACATGAGGAACCTGATGTTAAAAAACTAGAAGAGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19507 CCCTCAGGCTCCTGTGCACTTTCTCGTCATTCCTAAGAAGCCCATTCCTCGGATTAGCCA Gene GeneID:281816|HINT2:NM_174340:17_cdna Constitutive 0 NULL GeneID:281816 8 GENE HINT2 MGC140295 histidine triad nucleotide binding protein 2 EMBV3_41718 GATGTTGAAATCCTAGCCAGTGGAATGTGTGATGGTGGGAACCCTGTCCAGTGGTGGTGA Gene BVT0102_025159 + 0 NULL GK000019.2:56455765-56465682 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094694 TCONS_00094695 TCONS_00094697 1 XLOC_057522 Coding TCONS_00094694 XLOC_057522 Coding Coding H3F3B 19:56453714-56457661 j TSS70769 1257 1 TCONS_00094694_3 103 4 0.682463253928028 0.00513243745476913 0.00272525754219862 0.00635504231965849 0.0039064354252181 0.00305508516036944 0.0011805316920487 0.00152627109688319 0.00516981030835449 0.000111513547756483 0.00465814636374306 0.0017267276497064 0.00132709771565704 0.00192221384513197 0.00469058374206974 0.000658345334715517 0.0120549146560041 0.000576511207472494 8.02698947558676e-07 0.00841728349313479 0.0124067889534411 0.00455684636109584 0.00684795937165841 0.00301033853517474 0.0016327597635092 0.0150433956926346 0.0163193236128683 0.00651143725878817 0.00272672060134045 0.00331681718320691 0.00779748194675142 NM_001242571.1 H3F3B Bos taurus H3 histone, family 3B (H3F3B), mRNA. 0.0 753 99.29 0.337311058074781 NM_005324.3 H3F3B Homo sapiens H3 histone, family 3B (H3.3B) (H3F3B), mRNA. 2e-144 517 87.44 0.330946698488465 TCONS_00094694_3 sp|Q5E9F8|H33_BOVIN H33_BOVIN Histone H3.3; 2e-61 187 98.95 0.912621359223301 1 noncoding 0 0 0 0 0.373833257273362 0.299874277862355 0.0446310075722197 0.553422556965617 CTTTGTGTCGGGGGATGTCAGCGCGTCGGCGAAGGTGTCCACCAATAGAAAAAGTCATTGGTGTATGCAAATTAGGGTCCTATGACGCAGAGACGCAGCGTGAAGCGTGGGTATAAAAACGGAGGCATAGGGGGGCTTAGAGCGCAGAGCGGTTTGGTCGTTCGTTGGAGGGAGCTTTTCCCGTCTTTCAGCTACTGCGGCTCTTTCGGCAGCAGCGGCGGCGCGGTGGTCGGAGAAGCGGCCTAAAACTTCGGCGTTAGGTAAAAGAAAATGGCTCGAACCAAGCAGACTGCTCGTAAGTCAACGGGTGGGAAAGCGCCCCGCAAGCAGCTGGCCACCAAAGCGGCCAGGAAAAGCGCCCCCTCTACTGGCGGGGTGAAAAAACCTCATCGCTACAGGCCCGGGACTGTTGCGCTTCGAGAAATCCGTCGTTACCAGAAATCCACCGAGCTTCTGATCCGGAAACTGCCTTTCCAGAGGTTGGTGAGGGAGATCGCCCAGGATTTCAAAACCGACTTGAGGTTCCAGAGTGCCGCCATCGGTGCGCTGCAGAAGGTCCATCATACCAGTTCCGACAGTTGATTCATTGTGTTCCTGAAGGATGTTGAAATCCTAGCCAGTGGAATGTGTGATGGTGGGAACCCTGTCCAGTGGTGGTGAGGCTCCTTGAGAAGCACTCAAGTGGTTGACGCTTGCCCTTGCCTGAAGTCTGCATCCTGAGGTTGAATTTTATTGGGCAACTTGGAATCTGCTGCTTAAACAGTACAGCTTGTGCTTCCAGAGTGTATTTTTAACCTATAAGGCAAAAGTACTTTCTGGTTTTGGGAAACTTCCCATATGTTTTATCCCTGGGTTTAGGTAGTGCAAAAAAAGCAAAAATAAAAGTTTTCAAAGTTTAGACTTCCTTAGCTTTATGGTCTTGATTTGGATGGTATATTTTTTCACAGAGTTCTTCTCTGGGGAAATGTTCTGAAAGCTTTACCTTCCTCAGCTCTCCCCAGTAGCGGTCTGGGGCTCCCCTGTCTGGCCCCTTGTAAGCACTGCTGCTTGCCTGGTGTCAAGTGTTGATGCTGGGACCTGTGCTTCAATGGAGAGCAGGCCCCTTCTGGATCACCTTCAAATAGGGCAGCAGAGAGTAGAGACGGCCCTGTCAGCTGTTTTTGGATCAGCAGGAAACTGGGCTTGCCCTGAAGTTTCTGCAGGCAAAGGCCAGCCTGTACACGGGAACGATAACAGCAGCAGGGCAGCAATTTGCCT EMBV3_21334 CTCTTACATCCCTGGGGCAGCATTTCATACTGCTCATCCTTCCCAGGTCAGCTCATGCAT Gene GeneID:615376|EPDR1:NM_001102288:81_cdna UTR3_Alt 2 NULL GeneID:615376 4 GENE EPDR1 MGC165819 ependymin related protein 1 (zebrafish) EMBV3_07701 AACAGTTTCACAGACCAGGACAGCAAGAAAAGCACCTACAGCCTCAGCAGCATCCTGACA Gene GeneID:100141470|LOC100141470:XM_002691353:184_cdna Constitutive 0 NULL GeneID:100141470 11 GENE LOC100141470 NULL similar to immunoglobulin kappa chain EMBV3_18267 CATCCTACAGAAGTAACCATAAAACTCAAGAGGGGTAGGTGAACAGGCGCCAGAACTGTC Gene GeneID:509056|FHL1:NM_001034341:21_cdna Constitutive 2 NULL GeneID:509056 X GENE FHL1 MGC127148 four and a half LIM domains 1 EMBV3_36555 CCCTGCAGTGGAAGTGCTAAGTCTTAACCAGTAAACCACCAGGGAAGTCCCACAATATTT Gene BVV0102_249260 + 0 NULL GK000029.2:1062581-1067593 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164360 TCONS_00164351 TCONS_00164354 TCONS_00164359 TCONS_00164358 TCONS_00164350 TCONS_00164352 TCONS_00164355 TCONS_00164353 TCONS_00164357 TCONS_00164356 1 XLOC_100208 Coding TCONS_00164355 XLOC_100208 Coding Coding LOC532848 29:1062500-1121251 j TSS122999 13141 1 TCONS_00164355_6 2613 0.0738147781751769 29 0.776817021276596 0.000247197725773287 3.647791131124e-12 8.30750664467587e-05 1.77991457935405e-05 2.45757547504885e-05 7.67703087975097e-05 3.0137300507656e-05 6.13520872333686e-05 0.000104514340391202 5.52815318401852e-05 2.56020329319777e-15 7.63284145969075e-13 1.35934250122196e-10 8.94661902942086e-11 9.92490417499374e-05 0.0010247355080687 0.00103698627610534 0.00113126184705298 9.69580284526362e-08 8.37003347859699e-05 5.50240992263787e-23 0.000107788219320575 0.000110374308227495 0.00037009485902369 0.00011263772786121 9.87862719123476e-05 6.61843830594261e-08 0.000113825485673469 8.02949307848097e-05 0.00019718117064265 XM_003588005.2 KIAA1731 PREDICTED: Bos taurus KIAA1731 ortholog (KIAA1731), transcript 0.0 1.413e+04 100.00 0.596301651320295 NM_033395.1 KIAA1731 Homo sapiens KIAA1731 (KIAA1731), mRNA. 0.0 7133 79.72 0.592648961266266 TCONS_00164355_6 sp|Q9C0D2|K1731_HUMAN K1731_HUMAN Centrosomal protein KIAA1731; 0.0 3266 69.19 0.973593570608496 1 coding 0 0 0 0 -0.124444863450842 0.325468975225164 0.010094895070398 0.860700572588745 TCCCGCGGCCTGGCCGCGCCACTGCCGAGCGGTTTGAATGACGGAAGTGACGGCGGCTCGGAGATGGCCGCCTCGCTCACGTCCGAACGGCTGTTCGGAGGCAGCTGTGGGGCGGGCCGCCGGGCCTTCTGTGTCTGAGCCGCGATTCCTGAGGCCGGGCTTTCGTCTCCCTGAACCTTCATATTTAAAGTACTACATGAAAATGAAAAGAAAGGGAGTGAATGCTGGCAAGCTGAGATTGAGTCCTAATGAGGAAGCCTTCATTTTAAAGGAAGATTATGAAAGAAGACGAAAACTAAGATTGCTGCAGGTTCGAGAACAAGAAAGAGATATTGCTTTACAGATAAGAGAAGATATAAAACAGAGGAGAAATCAGCAATTCACTCGTTTGGCAGAGGAACTAAGGACAGAATGGGTGGAATCACAAACTCAGAAAATCAAGAACTTGGAAAAACTGTATTTGGCAAGTTTAAGAAATATGGGAGAGGGGCATCAACAAGCCAAAGAAAATGAGCCTGATTTAAATGCTCTGGCACACCGGGCAGCAGAAAGGAAAAAAAAGGCAGAAATGAGACATAAAGAGGCCCTGAAAGTACAGAAAAATCAAAAAGAAATGTTAATGAAACAAAAAACCTGGCATATAAAAGCTCGAAAAGAAGCTCTGCTTGTGGAAAAGGAAAGATCTGCCAAAATTGCAAGTCTGCCACCCCCTCCTCCAGCTCTCTTTGAGAATGTTGAAGTAAAGAAAACTAACGTGAAGACGAACAGTTCTACCTACCATCATCTTTGTACTTTTGTGAATAGAGAGGTGGACACAAAGCAGCCAGATCCTCATTTGGCTGCTGAAGAAGAAGCTAAAAGATTAGAAGAACTACAGAAGCAGGCAGCGCAAGAGAAAATGGAACAGAGTGAGAAGGCACATGCCCGGGGATTCCAAGCAATGAAAAAGATCCATTTGGCTCAAAATCAAGAGAAACTAATGAAAGAACTCCAGCAGCTCCAGCAAGAGGACCTGGCACGCAGGAGACTGATGGTAGCACGGATGCCGCCACAACTAGTGGAACTTCCATACAAACGCAGTGAAATGAAAGAAGATTGGCAGAGAGAGCTAGAATTTGCCTTTGAAGACATGTACAATGCAGACAGAAAGGTGAAAGGAAACCTGATTTTGCACCTTGAACCAGAGCCTCTGCCTGCTGTGATTGATCAGATCCAAGACGAAGAACTGGACCTCTCAATGGAACATGAAAGTTTAGGGGAGACTGAAAACATTCCAATGACAGAAGCTGAAACAGTACATTCTAGTGAAGCAGACGTTCCCTCAGCAGTGAAGACCCACCAGATTCCTTCAAAAATTCTTTTTAAAAAATTATTAAATAAGATCCGAAGCCAAAAATCTCTCTGGACAATTAAATCCGTGTCTGAAGAGGAGGGTGAAATGATTACAACTGTCAGTGAAGCTGAAAGTAAAGCCCTGACAGTTGAATCAGGAGCAACTGTGAGTGAAGACAGAACATTATCCTCTGGGCAGGAACAAGTTGTTGAAAGTGACATGCTAACAATTGACTCTGGACCACTTACTAGTGAAGATAAACCACTTTCATTTAGTACTGACTCTGAAAAGGAACAAGAAATGAAAACCACTCAGCCTCTCATAGCTCCAAGTTCAATTCTACTTCATCCTCAGGAAGAAGCAGTCAGAGTTAGAATGGCAGCGAGGCAGAAACAGATAATGGAAATAGAAGAACAGAAGCAAAAGCAGTTGGAATTGCTTGAACAGATTGAACAACAGAAGTTAAGATTAGAAACTGATTGCTTCAGAGCTCAGCTGGAAGAAGAAAAAAGAAAAAAAACTCAACAGACTGGGGTCAGCACTGCTCCAACATCATACACCATATGTTCTGATGAAGATAGGCACAGGCAGATGATTCATATTTATCAGCAACAGCTATTACAGCAAAACAGGTTTCACAAGCAGTCTGTTGAAACAGCCAGGAAGCGATTACTTGAATATCAGACAATGTTAAGAGGAAAGTACCCATCCATGTCAGCTACGCCAGTGATACCTGATTCTGTTACATCAGTGCCACCACCAAAATCTGAAAGACCCAGCGTTCCATCAGAACATGAGGATCAAGGTCAGAGACCCAAACTGAGTCCTGACAAACAACCTGTACAGATCTCCAAATTAGAGCAAGATTCTCAGGTTTCAAGACAGAGTCGCTTTCCACAAAGACAGGTAGAAACAACTGAAGCATTAGTCACTTCAGATGTTTTAGCCAAGCAAGCTTTGGAATCAGAAGAACACCAAAAGCAACTCTCACAGACTGAAGTACAACAGAGAGACTACAAATTGGTCGCTAAAGATTCTCAAATGCTTTCAAGGGCTTTATCACATGATAAGCCACTGACAGTACAGGATGCTAGAGAAAGAGCTGAAACATCTGGGGCAACAGCTTTTCAAAGTTTAGACTCCCAGCAAGTGTTCTCAGAGAACAATGAAAGTGTATCTTCTAAGTTAATTGAACCATCTTCATTCTTACCATTGGTAGCTGAGCATTCTTTTAGTTCTCTGCCTACTAAAGTCGAGTCTGGAGAAATCCAGCAGCCCTCTTCAACTGCGAGCAAAGGTGTAGTTTCTGTAAGCCACTCTGTAGCTGGCCAAATGCAGGATAAGTCTTTGCCATTCTCGGAAAATATCATAGCCCAGCAAAGTAATTTGAAGGCTCTCCAAGAACAGTTAGACCTACAGAAGGAAGTTCTTCGGACAAGACAGGAAGCTCAGGAACAATTGCTTTTGTGTAAACAGAAAGAGTTGGAAGGGCAAACTGGCCTTTCTATATTCCTTCCTTTAGTACCTCTGAATTCATTTGCTTCACTGCCTTCAGCCCAAGCTGAGTCAAGGAGAATCCAGGAATCTTCTCCAACCAATAAAGAGACTGGTGTTTCCTCAGGCCATCCTGGGGTCCCACAACTTCAGGATAGGCTTAATTTAAAATTTTTCCAAGAACAGTTAAAAACGCAGAGGGACAGCCTTCAGGCTAGGCGGGAAGCCCAGGAAGTATTATGTGTGCATAAACAGAATGAGTTGGATGGGAGAGTATGGGCTGAACAGACTGGGTCCTCTTCTCTCCCACCTCAAGTAGCTCAGCATACATTTACTTCACTGCCTTCTGCTGGTCCTCAGTCTGGAAAAATCCAGGACCAGTATTCATCTAAGACTGAGAAGGAGCATTTCTCAATCCAGACTGAAATGCCCACATCTCAGGATGGGTCTTTAGGTTTCCCACAACAGTTCCAACCTTTGCACGATTGTTTGAAGTTGCTCCAAGAGCAGCTGATTACACAGAGGGATGCTCTCCAGGCCAGGCATGAAGCCCAAGTGGAATTACTTTCACGTAAACAAAGGGATTTGGAAGACGCTAAGTCTGTGCAGATGAGTTCTTCGTTCCTGCCAGTGGTCACTCAACATTCACTTGCTTCACAAGTTTCAGCTAAAACTGAGCCTAGGAGAATTCAGAACTTTTATTTCTCTGAGAGGGATAGTGTTATTCCCTCAAATAATTTGGTAATGCCAGCATCTCAGGATGCGTCTCTTAGTTTTCCACAGTATAGTCTGCCACGGCAGGAAAATTTAACAGCACTCCACAATCAGTCACACGTTCAGAGGGTAATACTTGGCGATAAACAAGAAACTCAGGAATTTGTACACAAACAAAGTGAATTAGAAAAAATTTTCCCTTCTGAACAGACTGGCACTTCTTTGTCTCAGGGAGCTGAATCTGAAAGATGCCAGGAATACATGTCATTCAGGAGTGACAGTACTGTTCCCTTGAGCCACTGGAAGATCCCAAGATCTCAGGAAAGACTTCTGGGATTTTCACGACATACACAACCTCTGCAAGGTAATTTGGAAGGACAGCAAGAACAGTTAGACAGAGAAGAGGAGGCCCTTCAGTTCAGCCAGAGATCCCAAGGGAATGTATCTTCTGGACAGATTTGCCCCTCGTTCACACCCCGGTTAGGGCAGCTCTCTCTTACTTCATTGCCTTCTGCTGAATCTCGGGAACCTCTTTCAGCAGAGAGTGAGAGTAGAACTCCTTCAAGCCGTTTTCACATCCCGGTGTTGCAGGATAGACTTTGGAAGTTATCACAGCTTATACAGCCTCAGCAAGATAACCTGAAGTCACTCCAAGAACAGTTAGCTACACAGAGGGAAGCCATCATTCAGTCTAGGCAGGAAGCTCAGCAAGAATTTCTTTTGCACAAACAGGGTGAGTGGAAGGGAAGAGTGTCTCCAGAGCAGGTTGGCACCTCCTCCTTCCTACCCCAAGTCATACAGCCTCTTGCTCCATTACCTCCTAGTAAAGCTGGTAGAATCCAAGAACCTTGTTCAACTAAGAGTGATAATATAGTCTCCTCAGGTCATTCTGAGATACCAAGGTTGCCTGATAGACTTTTAGGTTTACCACAGCCTGTTTTGCCTCAACAAGATTATCCAGTCACATTTCAACAAGAACATTTGTATGCCCAGACAAACCCCCTTCCATGTAGCGAGAAAATCCAAAGAGAGTTGGTTTTGCCCAGACAATATACACTTGAGGGAAAGTCACCTAAGCATTTTGTCCAACCTCACCATGGTGATTTAAAGGCCTATCAACGGCAGTTAGATATACAGAGGGAAGTCCAAGAAGAATTCCTTTTGCAAACACTAAGTAAATTGGAAAAAGGGGTCTCAGCTGAGCAGACCACCACCTCTTCATCCTTATCCCACGTAGCACTGCCTGTTGCTGACTCTAAAGGAATGCCAAAGTGTTTTCCAGCCAGAAGTGACCTTGCTGTTTCCTCAAGTCATCCTGAGATTCTTAGACCTCAGGAGAGGCCTTTGCATTTATCCCAGGCTGTTTTGCCTCAGCAAGACCATGTGTCCACACAGTTGGGCCTTCAGGGTGAAGTGCTACGTTTTAGTGAAAAGGCCCAGGAAGAACTGCTAAGAGGCAATCACACAAAACTGATTGAAGGTGATGCTTCTGGGCAGCCTGTGCCCTCTTTGTTTCTACCCAAGGAAAGAGAACATTCGTTTATTCCACTACCTTTTGCTGAGGTAAAATCTCAAAACATACGTGAATTGTATTCAGCCAAGATTGAATGTGCAGCTCCCTCTAGTGCTTCTGTGAGCCCAAGACTTCAAGATAGAATTTTGAGTTTTTCACAACCCATCTTTGCTCAGCAAGATAACTGGGGACTTCAGAAGCAGTTGGAGCTACAAAAAGAAGTTCTGCCTTTTAGTCAGAAAGCCCAAGAAGTATTGCTTGTACCAACACAGACAGCCTTGCAGCAACAGACACACAAACATCGGGAGACTCTGAAGGATTTCTTCAAAGACAGCCAGGAAAGTAAGCCCACAGTTGAAAATGATTTTGAAACCCAGAAGCTCCAAGAATGGCTTCCTCATCTCCACGATCAAAAAAACATTGGTCCTGCAGACAGGAGCAACTGTGATGATTATCAGCTCCTTTCAGAAGGTGTGCATCAGGACAAAGAACTGGGTAGGAAATCCTCAAAACCACCTGTAGTAAAAATAAGAGGTGGATTGGACTTGAACCAACATGAACTTAGTGCCATACAAGAGGTAGAATCACCAACAAGTGGCAGAACTTCTATACTAGGTAAACCTGATTTTTATCAAGACAGAGACCCCCTAAGGGTCTCAATAAGCCGAGAACAAAGTTTTCTTGGGAGCCCTCTGGACCGTGATCCATTTGGTCATCTTCACCCAGTTGCTCAGGAGAACATCTGTGGTGATGACTCTGATAAAGCAGTCAAAGTCAAGGAGGCTGTGGTTGAGAATTATGCAGTATTAAGCTATGCTGTGGAGAGAGAAGGCCATACGTACCTGGATCCAAATGTGAAGTTAGATGTTAAGGCTGAAACACAAGAAATTTATCATGAGCCACTATCTTCAATAACTGTTTCCACTGGGAGTTTTTTAAGTTACGAAAACATAGATTTGAGCCTTACAGAGCCAGAGTCATTCCCAGAGCATGTGGACCATAGGGAACAAGAACCTCCTGCCGGTAAAGAAGAGGAAACAAATGTTTTAAGTTCTAGAGTTCCTTCAACACAAGATATTTATCAAAGACAGGACTCTCAGGACGTCCATAAACCTCTTTTATGTGCAGTGGAAACATTGACATCTGGTCAGACACACATTCAACAGATGAGAGACAATTACATTAATGAAACAAATTTGATGACTGAAAAAACAGACTTTCGGGTTGACTTTGACTTTCCAGAATTGGAGCACAATTTTCCAAATTTGCATCGTCAGCTATTTAAACCCTTAGAACCACATCCAGATTTTGATTTGTTATCATGTTTCTCTGGGATTTCTCAAGACAGTAAAGACTTTAACCAGAGGTCAGGTTCTTCCTGTGAAAGCCTCCGTGCTACTCCATCCCCCAAAAGTATGGCTTCTTTTACAGCACTGAGGAGGGCCAGCCTGCATTCTTCTAACACCAGTCTGAACCAGCAGCCTGACCCTAACTTGGCTTGTGACACAGCTCAGAGTTTTGCTGTAGAAGATATTGAGGGGTCTGAACAATCTTTTCGACAACTTCGACCAGAATATTCTTCACAGGAAGGGAGCCAGCATGCCGATCTACCAAGCATTTTTAGCATTGAAGCGAGAGCTTCTTCCCAAGATGTGGAAAATCAGAACTGTTCCTCTGAACATGAACTATTACAAAACAAGCAAAAAAGTGTTCATTTCCAACTCTCAGTAGGAAATTTGCAAAGTTCAGTCTTCAATTCATCTGGTGAGGCTAATGTATTTCATCAGTTAAATCTACAGCATGGCACTACATGTGGTTCTACCTCTAGTGAGTGGTCAATAAAAGACCAACCAGAAGGCAGAAAAGAAAGACTGGGTTTTGAAAAACTATCAGAAAGACTTGATACAGTGTTACAAGGTCAAGGACTCACTGATGATAAAAAAGAAACCTGTGATTTAAATCCACACATAGAGGAAACTGATTCTCATTTATGTGTAAGGACAGTAGAGATGGGAACTTCAATTCAGATACCATATTCACTCACTGTTCAGAATGAAAAATGTCTTCAGGACTCAACTATGGCAGGAATTCCAACAATCGTAGGAAACCCATCTCAACTTGCACAATCAGAGCTCTTTGTAAATTCTGGATCATTTTCATTACAGAGATCTATTCCAGTCTGGGAAACAGAATCTGGCCATGGTATAATGGAAGAACCAGAACTTACATTGACAAGCACCAGTGATATCAGTATTGCTGAAATGGATTTTGCAAACTTAACCCTAGAAGAAAAGAGAGAAAATGAGGCAAAGAGCTGTTTTCAGGTGAGTGAATTTCTGCCTCTTCTGTCAGAAACAGAAAACTCAGATTATCCAGCCATGTCAGAACATCCACTGGAGAGACCAACTGTGTGTGGAGAAACCTTTTCAAGGTGTACAGCTGCACCAGAGAGCTTACAAGAAGCATTCATAAAAAGAAAAAAGGCATTTATAGAGAGATCCTCACAGAGACAGAAAGAGATAAAGGACAAAGTTCATGCCTCTGGATATTCTCAAACCAAAACAATAACAGAGAAAACTACAGGTTCCTTTGTGAGTGACCTAAAGGGTATGAGTAAAGTTAGGGTGTCGCTTCCTGAAGATAAAAAGACTGCACAACCCCATACGCACGAAAGGGCAGTAGGATTATACCTTCAATTAGCTGAAATGAGAAAGCAGAAGGAAGACAAAGCAAAGCAAGATGCACATGCCCAAAACAGAGCAAGGACAAAAGAATTTCATAAGGTAAGCAGCATCCCATACATACCCCCAACTTTTCATGTCTAAGGCACATCGGAGCCTGATACTAATAATAACTGATACTATTTCCTCCACAGAAAACATTAGAGAAGCTTCGAGCCAGAAATATATGCTGACTTTCTGCACAAAAGGTTTCTTTTTATTCATTAACATAGGCAAAGTTATTTAAGTCAATAAATTTTTAAGGATTTTTCACACGTCCTGATTCTTTCCACTGCCAATCACCATAGCTCCTCCAGGGTTGTCATCTTCAAGGTAGCCCTGAAGGAGAGTAGATACTGGTTAAATTTTGAAGACTGTATTTACACTCTCCCACATCACCTGTCATGGATATGAGTGGCTTGTATCTCCATCAGGAAAACATAGCACTATCAAGTGACTATTATATCCAATGGAGAATTCAGTCTTTGGTCACAGCGTTAAGGGCTCCAGGATTTGGTCCCATCAGCCCTCTTTGAAATGACCTACAAAAACTATTTCTCTAATGTGTACATACCTTTCAAAAAGTTCTGCTCAATCCACAGCTGTGATGCCTGTATAACAGAAATATTAAAGGTTTCATTTTCAGAGATGGTCCTATAAAGTTCTGAAGCCAACTACCCCAGTAATAAACTAGAAAACAAGTCCAGCAATCTAGGCATAGACTCTTCAATGCTAGGCATAGACTAGCAATGTCTGGGTATTATAAAAGCTAATTAGAAAAATGGCTGTGTTCTATTTATACTAGAACAGTGCTGACTTTCACAAGTAGTTAATTAAGGCTAATAAAATGTTCCCAACAGGCTGTATGCTAACAAAGTAGCAGGAAGAAAAACCTAGTTGGGATTTTGTTTTACGGTCATGTCCACAGCAAATTAGAAACTGCGTTCTAAAAGCCTTGGTAATGACCATCAAAATCTGACAGATAATAATTACCTGCCACGTTGTTTTAGTTGGGCCTCTTAGATCTTCAGTGGAGTTCACTTCAAAGTTTGCCACCTACAGAAAAGGATTTGAACAATAACTGGGACTGATTCGGTTCCATTTTCATTCATACCTAAACTTTGTTGCAAAATATAAATGTCCTCAGGCAACTTTAATCTTAGAGCTGTCATGTTTTAAAATATAGTTTAATGTGGATGTTCAGAAAGGCTATTTTCACTCAGCCCATTCAGAGCAGTTGAACAATTTTGCCCATCATCATAACATCCCTGAAAAAACAGTAGAACACGTAATGGGCTGTTTAACGTCTAGTTTTTTGCATTAAATACAAGGGGGAAAAAACGAAAATCTTACCTGTAATCTTCAAAGACCCAATTTCCTCAAGCAGTTTACTGTAGGATCCTAGAAGTTAAATATAGCAAGTACAATTGTGTTTATTCCTTCATCTTTCCTAATATTGAAAAGCCATATTATATCCAATTTTTACTCATGAGCCTAGTCAAAAAAAAAAAAAAATGTTACAGGTCTCATTGTCACCACTGCAATAAAATTACAGTGATGGAAGCAAAACCTGTGTTCTCAATGTAGCCACATTAACAGTTTTATGGACACCATGAACAAGTGCCCATTTTCAGTAGAATGAGGCTTTGTAAATAAGTTTCCCAAGCTTAAGACAATGTGCAAAAAGCTTCTTCTGCACCTGTACAGCTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGAAGGCTGGCAGGCTACAGTCCATGGGGTTGCTAAGAGTTGGACACAACTGAGCACACTTTTCATTTTCATGCACTGAAGAAGGAAATGGCAACCCACTCCAGTGTTGTTGCCTAGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTCAGACATGACTGAAGCGACTTAGCAGCAGCACCTGTATAGAAGTTCCGCTTTGTTAAGCATGCTATCAGCAAAGGAAAGCTGCTAAAAGCAACAGAAAGTGAAAAGCAAAATACCTGTTTAGGGTCAGGAGATGGGATCTGTCTAGTTCTTAATGACAACCATAGGAAAAAAAAGTATTAGTTACTTTTGAAGATTCTGTCAAACTGACCAGTATAAGAAACTAAAAGGATACTTGTATCAGTAGAAATACCAGGTCTAATATGCACAAAGCAAAAAAACCAACGATGCCAGATACTGAATTTATATCGCACTGTCTTTTGAACAGCCAGCAGGAACAAACTGCTGAATGCAGATACCATGCAGTGCAATTATGATTGAACTGGAACCACTCCAACCTCATTCTGTAATGATACTATCTGAGAAATTTACTTTCACACACACCTCTATTTAACATGTGAAATAATTTTTTCTTGTCATTCCAGTAAGCAACCAACTACATTAACTCTTATAAACTTAACTCGTTACCTTTTTACCCTCTTTATACCTATAAAACTTACGTAGGAAACTATCCAATCATACTTGCTATTTACATACTAGTTTAATAAAGTATACAAGGGACCAGGGCATTTCATGCCCTACATATGCTGTGTCTTCCTTTTTTTCCAATGAGTACAAGTATTACAGCAAATTTTTGGCCAAATTTTTGGCCAAAATCTTGATAATTCTGTTTTACACCTAAATAACTAGCAGTCACAATAGTAATGGAATACCATACTCAAAATTTCATTGTTTTCAGAACTTCTGAATCCTATTTGAATAGAAATTAAATATTCTACTTACCAAAAACTTACCAAGTTCAAATCATATTAATTCCTGTGGATACCAAATAATAGATTATGGGTTACTTACTCATGATTAAAAAACTTAAATATATGCTTATTTAAATATTTTGTTATACTCAGCTCTATCAGAATTAAGTTTTAGTTCATATCTGTATCATTCAGCAGTTGAACATTAAATTCATCATCTGAACTGGAATGGTAACCCCTCCCCCCAAATTATAGTCACTAACTAAAACTCACCTAAGTTATCCCACCCTAAAACTTGACACAGATCATTGGGATATGCCAATACCTAAGATTAAAAAAAAAACTGTTAGGTTTTTCATAGTTTAATTGGCAGCTTTGTCTTGTAGTTTTTTCCCACAGATCTAACAGGTAGTTCTATGAGTAAAGGAAACTACATAGTTACTCTATGAGGCGTTTCCAACGATGTAGGTTTATAGAAAAAGCCCCATCGGGATAGACCTCAATGCTTAATCATTGTTTAATTAATTTTAAATTAAGTAATTTAAAGAAATCATACAATGAATTAATCACGACATGTATTTTAAAGTCAATCCTTAGGAAAGATACTAAGTAGCTATTACAGCTGAACCAAAAAATTACATATGTAAATTTAAGCTTTATTATTAACAACTTCATTACCAGATTACTGCAAAACTATTTAAATGAATTTTTGCCTTTAAATTGAGAACTAAAATGTAAAATATTTTCTCATTGATAACAATTATGAAAATACAGAAAAATGTTAATATGCCTGATGTTCTGACCATTTGGGGATCCCTGAGGACAAATTTGGCATTTGTATATCATTCAGATTTATGAAATTATGTGTCCTGTGTAGTCATTTCTAACATTACACTATATAATCTTCTACTTCATTTTAGTATATGCATCAAAATATTGTGGGACTTCCCTGGTGGTTTACTGGTTAAGACTTAGCACTTCCACTGCAGGGGGTGTGGGTTCTATGCTCATCACTACAGAGAAATGCAAATCAAAACTATAATCAAGTACCATCTCACATTGGTGAGAATGGCCATCGTAAAGTCTACAAATAATAAATGCCAGACAGGGTGTTGGAGAAAAAAAAAGGAACCTTCTCCTACATTGTTGGTGAGAATGTAGATTGGTATTGCCACTACAGAAAACACGAGAGCTACCATATGATGAGCAATCCCACGCAAAGAAAAACATGGTTGGAAAGGATACGTGTACCTGTGTTCACTACAGCACTGTTCCAAGATATGGAACCAACATAAATGTCCACTGAGAGATGAACTGATAAAGATGTGTGGGAGGGGTGTGTATTTTACTCAGCCATTAATATGAAAATGATGCCATTTGCAGCAACATGGATCTAGCGATACAGAAAGCAAACTAAGTCAGAAATAGGTATCACTTACATGTGGAATCTAAACTACCACCCAAATGAACAGATCTATGAAACAAACAGATATGGACTTGTGGTTGGACAAGAGGTGGGGGTGTGGGGGAGCCACAGACTGGGAACTTGGGATTAGCAGATACAAATTCATAAGATAAACAAGGGCTTACTATATAGCACAGGGAATTAATATGCTGTGATAGATCATAAGAGAAAAATTATATAACTGAGTCACTTTGCTGTACAGCAGAAATTAGCATTGTAAATCAACTATGCTTCAATTTTTAAAATGTACAGGGGGTATTAGAAGATTAAAAATTCATATGCTTGAAGAGGGAATATCCAAGATTCTGATAGCTTATAGTTCTGGGACCCCTTCCTGCAAGCAAATCCTGGCACAATGTCACTATAAAACATGCCAATCCTGAGATGCATTTTCTGAAATTACATGATGAATAGAAATTTAAAGTTGGCAAAAATGGCTTTCAAAAATTAAACCTCTGGAGAAGTTCTGACAATGTATCATATTTACACAAATCTGAACAAAACTTACCTAAAGCATTAGACATATCTTTGCAAAATCCAGATACTGTATTCCGAAGATAAAAGCCTAAAAAAAGAAGCCCATCTTTGTTTTATGTCAACATTAAAACTGAGTACTAGGATCAATATAGCTGGTAATTTAGAAGCTTATTTAGCTTTACAGTCCTGGAAGCAATCTTTATGCTCATCAATACACATCCATTTTATGGATCATGTTCCTTCTTATCTGTATCAAAACTCATACTGAACAATGAGTTGTGGGTTGCAAAAGAGGATTTACTTTCGCACTTGTCTGTAAGTCTTTGTCCACAAATTAAACAAAAACAAACACAAGTGCTACTGTAAAATGCATTATATATGTGGTGATGAAAAGGATATTTGAAATACAGGTAACTAGGAAGGGAAAATTAAGTTATTACAGTACTCAGCATTTCACACTAAACTTGTCTAAAGAAAACAAAAACAGGAAATTGTAGATACCCTACCTCAGGAGGGTAGGTGGAAAAAAAAATCATTGTTTATGCAAACTTTTCAAGATTACAATCTGTTATTTGATTCAGTGTTAAAATGGTACCTTTAAGTTCTCTTACCTAGAAATAAACCATAATAGGCAAAAACAGTAGGACTTTTGTTTATTATTTGTCAAGTCAATCTCTGCAGTAACAGCCTCAATTTTTTTCTACATAATTTTTCTT EMBV3_27157 CTTCGTCCTCAGTTCCTTCCTGGTGACCCTCATCTCCTATGGCTACATCGTGAGCACTGT Gene GeneID:519437|LOC519437:XM_002707816:448_cdna Constitutive 0 NULL GeneID:519437 4 GENE LOC519437 NULL similar to Olfactory receptor 6V1 EMBV3_15249 GATGAAATTAGAGAGGCCACGGACTTCAAAGGGAAAAGCAAGGCCAAAGACTGGGAGAAG Gene GeneID:541246|KIF3A:XM_002688960:107_cdna UTR3_Alt 2 NULL GeneID:541246 7 GENE KIF3A NULL kinesin family member 3A EMBV3_00713 GAAATCCACAAGAGCCCCCTGACATGCCAGGATCCCTGCTCAAGAGGCACCCAGAGGGAG Variant GeneID:504653|LTBR:NM_001103228:14_cdna 851^958 1 EMBV3_14423 GeneID:504653 5 GENE LTBR MGC152267 lymphotoxin beta receptor (TNFR superfamily, member 3) EMBV3_24707 CTATAGTAAAAGGGGCTTGATCAGGTACCCAGTGTGAGCTGGGGTGGACATAGGAGGCCA Gene BVT0102_168555 + 0 NULL GK000030.2:82455724-82550471 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28055 TGGTCATGGAATCAACTTCCAGCCCGGGTACCGCATCCGAGACAAAGACCTCAGAAAGAT Gene GeneID:783966|LOC783966:XM_002687151:14_cdna Constitutive 0 NULL GeneID:783966 5 GENE LOC783966 NULL similar to ankyrin repeat domain 26 EMBV3_18874 CCTTGGGTGGCTGGTTGACACAAGGTATAAAGGCCCACCTATCACCCCAAGTCAAATCGA Gene BVT0102_094257 + 0 NULL GK000009.2:32265124-32425924 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235004 TCONS_00234998 TCONS_00234999 TCONS_00235000 1 XLOC_144146 NonCoding TCONS_00234998 XLOC_144146 NonCoding NonCoding - 9:32310222-32320356 - TSS176287 2792 3 TCONS_00234998_3 72 0.679441260744986 3 0.724760682917201 0.00983733749072953 0.0101371979365872 0.0127103245956048 0.00834543299188456 0.00568979495486662 0.00131430353931889 0.00409189422517492 0.00849438165497996 0.00740773868787225 0.00212169905065288 0.000308569706887329 0.000614950409318723 0.0012540190690429 0.00234053253081652 0.00230872456243719 5.95866603644809e-07 3.75442796679508e-07 1.0951381044767e-06 0.00853683431381165 0.0134597738976686 0.00317772525550934 3.65147451458339e-07 1.54985121836703e-07 0 0.00975026396909662 0.00648610014919699 0.00750077646357248 0.000196085124371147 0.000121905713748361 3.0037792632131e-07 XR_240300.1 LOC101902865 PREDICTED: Bos taurus uncharacterized LOC101902865 (LOC101902865), 0.0 825 93.78 0.193767908309456 NM_020066.4 FMN2 Homo sapiens formin 2 (FMN2), mRNA. 2e-52 212 80.60 0.080945558739255 0 noncoding 0 0 0 0 -0.938087904037599 0.00257931357272917 -0.156044335757595 0.0270594298825993 GTCAAAGACAGGAAGGCGGGCGAGAGCCAGAGTGGTGGGGTGTGAGGAAGACAAGACTGGCCATTGTAGGCAAGTAGATGGGAGGGCCGGAGCCAGGAGTGCAGGCAGTTTCTGGAAGCTGGGAAAGGCAAGGAAACAGATTCTTCCCAAGGAGCCTCCAGAAGGGACTCATCCCTGCCCTGGTTTGAGCCCACTGAGATGCATTTCAGGTTTCTGACCTCCAGAACTGAGGGTAACGAATGCGTGGTGTTTTAAGCCTCTGATTTGTGGTAATGTGTTACAGCAACCATAGTAAACTAATACTGGGAAAAAGCTGAAAACCAGTATTCTCTAGAAGCTGTGAACTGGAGATTCCAAGATCATTTTCTCTGAGAGAAGCCAGCTGCCATGTTGTAAGGATGCTCAAGCAGTTTCTCCCCACGGCAACAGCCAACATCAGTTTGCTAGCCATGTGTGTGAGCCACCTTGGAAGCAGACCTTCTAGTCCCAGTCGAGCCTTTAGAAGACTACAGCTCAGCTACTTTCTTTCTTTTCTTTTTTCTTTTATTATGCATTTTATTTTCATATAAATTCACATCCTAGAAAAATTAAAATAGAAACACTAAATACAGCATTGCACAGAGCAATCTCTGTTAAATGCCCCATTGTATCATTGAAGTTCATACCCACGTGGAGGGACTGAAGGAGACAGGAAGATGGCAGAACAGCAACCCGAGAGCCACCACTGTGTCTGTGCACATCAGCTACAGACTGAAAGGTTATTTTCTTCATAGACAATCATATCACCTGCAAATCATATTGAAGGAGGAAACAGACAGAGTTGGACTCCATCTTAGGCCAGGCTGCGAACATTAGGCTACACGCATGGTCACCCTCCCAATGGACTCTGAACTTTGTGCCCGGTGTCTATAGAAGTGGCATACCAATGGAAAACCAGACCCCCCGATAAAAGAGCCTCGGGACTTGTACTTGGACTCTCCATTGCCTAAAAGAATACGCTAATTATCTCTGCAACAGAACAAAGTTGTAAATTCCATTATATTTATCGGGATATGACCACAGGCCTATTGATAAACGTTCACTGTTTATCTAGTCTTGTGACACATGAATCATGGGTTAACTTTGATCGTATCTCTCTTTTACCTTGTCCAGACTAGTTTCAAGAAATTTGGGGAGGTGGGTTTGGGCAAGTACACTTAGGGTATATAAGGTTTTCACAAAAACGGTCGGGGTCCTTGGCTAAGAGGAGACTCTGCCTTGGGCCCACCGGTGTTATAAACTGCACTCCATCTGCATGGTCCTTCTGAGTGAGTTTGTTTCCCGGAATGTGTGGCTACAACAATATTCATTTTATTTCCGTTTTAATCCTTAAACCTTCTGTTTATCCTGTCTCATCACACAGTGCTAAACAGAAGTGGTAATAATGGTTTTCCTTGTCTTGTTTCTCATCTTGAAGGCAATGCTTTCCACATTTTAACATTAACTGTGGCATCTGCTGTAGGCTTTTTGTACATGCCTGTAACAGACTCTGTGATGTACCTCTGAGGTCCCTCTTTTCTGAGCTGAAGTAATTCTTCCAGCAGCTGGCGGTACTACTGGCAAACAGCCCTGGACCGTCAACCTTCTTCAGCTAAAGAGAGTAAACTGCCCACATCACATCCACTTCCTGGGGTAGCTCACCTTGGGTGGCTGGTTGACACAAGGTATAAAGGCCCACCTATCACCCCAAGTCAAATCGACTCCAAAGGGCTACCCTCATTCCAGCACTCTCTTTAGGGTTGGGTGAAGCTTTCCCTGAGTCTACACTGCAGCCTGACTTCTCCCTTCTCTGCCCAGTCTTACTTCCTACTTTCTCTTCCAAAGATCCTAACCTTGGGAACACTCCCTAATCAGTTTCCTCCATGTTAACCTCTATCTCAGACACTTCTTCCTGAGAAACTCAAGCTATGACAGTGACTATTTTCAGTTTTCCAATTTTTCTAATCTAAGTGAATATCAAGTTTTTCTAATGTTTCTTCTGCATCAATTGGAGTAATCATCTGATTTTTCTCTATTGTTTATGAGGCCGTAGACAATTTACAAGTAAACTGATAATTACATTTATGGGATGAAGACATTTTGATCGTAATGTACTATCTTTGTGCATTTTCAGATTCAATTTGCTAATATAAATTTTGTTCAGAATTTGTATTTGTGGTCATGATTGAGATTGGCTTATTTCAGGGTTTTCTGGGTTTCCATTTTGCTTGTAATCTTTTTGTCTAGATTTGACATCAAGATAATCTTGGCTTCATAAAATAAGTTGGGGAGTATTTCCCTCCATTTCTGGTCTCTGAAAGGGTTGGGGAAGACTGGAATTATCTGAAGATCAAAATTGCTCTGTGCAAAGGTTTTTAACTATTTCGTTTCTTTAATGGTTATAAGACTATTCAGGTTCTCTAATTCTTCTTGAAATATATTTTACAATTTGTATTTCTATAAGAAATATTTTCATCCAGTTTGTAAAATAATTTACTTTTCTCATGACTTTGACATTTTTAGTCATAGCATTTTTTTTGTTCATCCCATTTATTTTGAGACTACTCTCCCTTTTTCCCTTAATTTTCACAGAAGTTTGTTTTTGTATTCTTTTTCAAAAAATCAGTTTAGAGACTATGTCGATTTCCCTGTTGTATGTTTGTTTATTTTTCTATTTCATCATTTTCTTCTAAAATTGCATTACTTTTTTCTTTCACTTTATTCTCTTGTTCTTTTTTTAAACTTCCTAAGATAGATATTTAACTTACTAATTT TCONS_00235005 s 5' 40379 TCONS_00234991 TCONS_00234992 TCONS_00234993 TCONS_00234994 TCONS_00234995 TCONS_00234997 s 3' 45100 EMBV3_28815 ACTTGCCCTTCATGTACAGCATCGTCTACTTTGCCTTCGCCATCATCGCCACGCTGCTTA Gene GeneID:524365|TRPV5:XM_002687108:428_cdna Constitutive 0 NULL GeneID:524365 4 GENE TRPV5 NULL transient receptor potential cation channel, subfamily V, member 5 EMBV3_32367 TTCGGTGCTGACCAGCAGAGTCATGAGTGGATGCTGATGTTACCCGAGCTGCGTGTTAAA Gene GeneID:783375|ACBD3:XM_002694001:302_cdna Constitutive 2 NULL GeneID:783375 16 GENE ACBD3 NULL acyl-Coenzyme A binding domain containing 3 EMBV3_02591 AGCTGAGTGTCCTAGTTGCCTATGAAGGTTTGCCACTTCATCTTGCACTGTTCCCCAAAC Gene GeneID:534067|USP34:XM_002691422:416_cdna UTR3_Alt 2 NULL GeneID:534067 11 GENE USP34 NULL ubiquitin specific peptidase 34 EMBV3_22760 GCACCACAGGTCACCTTCTGGATCATCCCATTCTGGTTCCCGTTCAAGTTCAAAAAAGAA Gene GeneID:508905|ZRANB2:NM_001105346:31_cdna Constitutive 2 NULL GeneID:508905 3 GENE ZRANB2 NULL zinc finger, RAN-binding domain containing 2 EMBV3_24841 TGTTCAAGGTTGTCTTCTGGCTGGGCTACTTCAACAGCTGCCTCAACCCCATCATCTACC Gene GeneID:407140|ADRA1B:XM_002689347:40_cdna Constitutive 0 NULL GeneID:407140 7 GENE ADRA1B NULL adrenergic, alpha-1B-, receptor EMBV3_38975 TGGACGGCGGCCTCAAGTGAGCTGAGAGAACACTTTGCACAATTTGGCCATGTACGAAAA Gene GeneID:613614|SLIRP:NM_001037485:138_cdna Constitutive 0 NULL GeneID:613614 10 GENE SLIRP MGC133520 SRA stem-loop-interacting RNA-binding protein EMBV3_22334 GCCCCTAACTATTTTTTATAGTTCTTTCTGGGTGTGAGCAGTTAAGAGGAATAAGGGCAG Gene GeneID:505641|POLR3GL:NM_001075213:53_cdna Constitutive 2 NULL GeneID:505641 3 GENE POLR3GL NULL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like EMBV3_08664 TTGGGATGAAAAGACTGCCAAATTATTGGCCGACCAAGCTTTTTAAATTCAGAAGAGCAG Gene GeneID:510773|PID1:NM_001079584:91_cdna Constitutive 1 NULL GeneID:510773 2 GENE PID1 NULL phosphotyrosine interaction domain containing 1 EMBV3_40895 ATGGGGCTCCGAAACATCCTCAAGGTTTGCTGTACCCACGACATCACGACCGTCAGTATT Gene GeneID:515243|C5H12ORF4:NM_001075704:29_cdna Constitutive 0 NULL GeneID:515243 5 GENE C5H12ORF4 MGC139467 chromosome 12 open reading frame 4 ortholog EMBV3_01321 CCCTGTCTTCCTCAGCGCCTCCTGCTTCGACAGCCAAGACCACTCAGCTTTCGAGATGGA Gene GeneID:618680|ZNF579:XM_002695381:224_cdna Constitutive 0 NULL GeneID:618680 18 GENE ZNF579 NULL zinc finger protein 579 EMBV3_40721 TCCTTGAGTGTGTCCCTTGAGTCATCTGTTCCCTGCGCTCTGAAGGCCACACTCCGGACC Gene BVT0102_047955 + 1 EMBV3_12092 GK000015.2:77193644-77236629 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21788 CTGAAGGTTCCGCCAAAGGAACCAGTTTCACTCCAGAAGAATTTCAGAAGTATCAGCAGC Gene GeneID:517854|MGC151921:NM_001075759:5_cdna Constitutive 0 NULL GeneID:517854 X GENE MGC151921 NULL odorant-binding protein-like EMBV3_09325 CTTGCTCTGGAGGGAAGAGCGATGGGAGAGGGCCCAAGGGATGCAGACAGTGATGAAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17865 ATGCCGGAAAGTCGGCCAAGAAAGACAAAGATCCAGTGAACAAATCTGGGGGCAAGGCCA Gene GeneID:282052|RPS25:NM_001025315:45_cdna Constitutive 0 NULL GeneID:282052 15 GENE RPS25 NULL ribosomal protein S25 EMBV3_13668 GGGTAGAAGTGAGAAAAGAGGGAATGGTAAGTTAAGGCACAGGACATTTGAGGGTACCAG Gene BVT0102_162097 + 0 NULL GK000009.2:39759909-39804096 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237106 TCONS_00237109 TCONS_00237112 TCONS_00237105 TCONS_00237114 TCONS_00237115 TCONS_00237116 TCONS_00237113 TCONS_00237107 TCONS_00237117 TCONS_00237110 TCONS_00237108 TCONS_00237118 TCONS_00237104 TCONS_00237111 1 XLOC_144650 Coding TCONS_00237105 XLOC_144650 Coding Coding RPF2 9:39801004-39825773 j TSS177345 3581 1 TCONS_00237105_1 90 0.245741413013125 5 0.85562015503876 1.54479543804762e-09 6.44869759765121e-05 0.000662277354780709 0.00017875994173623 0.000478554881289515 0.00030995554066559 5.8924785826012e-05 0.000453687312171258 0.000952153018007701 0.00031749904490466 0.000629216834697881 0.000177883069413154 4.92019415703257e-10 0.000410551409858789 6.96446622149247e-37 0.002068055456632 0.00113852652982998 8.66821930121772e-08 0.000839716723571314 0.00134151445166673 4.94665154662268e-12 5.91269141062052e-05 0.000478638209858898 0.00109007003177208 0.000683882777777858 0.000172920886055394 0.00101204061300241 0.000119430656430454 9.14191664824089e-05 0.000807364095671166 NM_001046083.2 RPF2 Bos taurus ribosome production factor 2 homolog (S. cerevisiae) (RPF2), mRNA. 0.0 881 100.00 0.135995531974309 XM_005267160.1 RPF2 PREDICTED: Homo sapiens ribosome production factor 2 homolog (S. cerevisiae) (RPF2), transcript variant X1, mRNA. 0.0 910 79.69 0.284557386204971 TCONS_00237105_1 sp|Q2YDN6|RPF2_BOVIN RPF2_BOVIN Ribosome production factor 2 homolog; 9e-57 181 100.00 0.988888888888889 0 coding 1 1 1 1 -0.598706214735461 0.0519646856703575 0.0182583860129349 0.822456108054909 GGGTGATGATTTTGATGTAACAGAAGACTACAGAAGACTAAAAAGTCTTCTTATTGATTTCTTCAGAGGCCCCACGGTATCAAATATCCGCCTGGCTGGTTTAGAGTATGTTCTACACTTCACTGCACTGAATGGGAAGATTTACTTTCGAAGCTATAAGTTGCTGTTAAAGAAATCTGGCTGTAGAACACCACGGATTGAATTGGAAGAGATGGGACCCTCGTTGGATTTGGTTCTGAGGCGGACACACCTGGCATCAGATGACCTTTATAAATTATCTATGAAAATGCCCAAAGCCCTGAAGCCAAAGAAGAAGAAAAATATCTCTCATGATACTTTTGGTACAACTTATGGAAGAATTCATATGCAAAAGCAAGACCTAAGCAAACTGCAAACCAGGAAAATGAAGGGGCTGAAGAAGCGACCTGCAGAAAGGAAAGCAGAAGATGAGGAGAACAAATCAAAGAGAATTAAAAAGAATTGATGGAATTTAGCCAATAACTGCATTTTTATTGTAGTCTTAAGAGAATTATGAAGCATCCATTGTTTCAGAGTTTCTTATAAGATTTTATTGTATATTTTTATAACTTGATAATTTACCTAAACTATATATATTATATACATTATGAACAGTAACATACTAGTATTAGGTTGAAAGTTACAATCTTACTGTAGATATTATACCCAGGTATGCCTTTTTCTTTCTATGATGTGACATTACCCTCTGCCCACCCCCTACAATGTCCCATGTCTCATTGGGTAGATAAGTGAGGAAGGATCTCTAGAACAACCAGTGGTATTTTAGAGAATTTTGAGTTAAGCCCTAGATAAAGGGAGGAAGTCATGGAAAGTATAAATGTTCCAAAGTAACTGTATACATGCTCAGTGTGAGCTGCCTGGAAACTTTGACCCCATCTCCCAGCATATACCTACAACCTGACTTTCCTGTTCTGCCTCAAATTCTACCAGAGATTCATTTTGAGATTTTAAGTTTTATGTCTTAGAACATAAATCTCTGAGATGTCCACTACCTGACATATTACCTTATTTTGATTAATTTCAAGAGATTCTGCTACTAAATGGAGCCTTATCCATCTTCTCAGAGAGAAAAGAAGTTTTGCTAAGGGTAGAAGTGAGAAAAGAGGGAATGGTAAGTTAAGGCACAGGACATTTGAGGGTACCAGGTAGCCCTAGGTAAAGGGCACACGGAGGCCCTGGGTGTTTACATACTGAGTAGGAATAAGTCAAAGCCAAACAGCTTGTTTTGAAATTTTCTTGAAGACTGGCCCTGTGCCTAGAAAAATGGCAAAAGGCTTTCTACTTCCTATTCTTAGTATTGCAAACTTGTTTTCCCTAAATGTAAATTTTAGTTTCCTTGATTGAGTCCCTGGCAAAGAGGCTCCTTTACACAACCCAATTATGCTGTACAAGAAGAAACGTACATAAACCATGGTGTGTTATATGAAGTGGAAATGCTTTTGTTTTCAATTCCATGTCAAGGAGCTCCTCCATGTCTTTATGTGTGCATGCATTTATGTGAGTTTGCTGACACTAAGCAAAAGCTGGAATCTCAATTTTACTTTCTTTATCCTTTCTCTTTTGTAAACCCATTCCTTAGCCTTCTCTCTCCCCATCGCTTTCCAGATGGCTGATACTCTCCTCTTAAAAAGGAGGGCGTTAGTATCACTTAGGTGCACTTGTTGCTTGATTATACATTGTTTTTCTTTTTTTTTGGCTTCTCGTTGCAGAACACAGGTTCTAGGCACACAGGCTTCAGTAGTTGCAGCACTCAGGCTTAATAGTTGTGGCACATGAGCTTGGTTGCTCCAAAGCACGTGGAATCTTCCCAGACCAGGGATCAAACCTGTGTCCCCTACATTGGCAGGTGGATTCTTAGCCACTGCGCCATCAGGGAAGTCCTTGATTATAAATTTAACCAAGACTACATAATTTTAGACCTGAAAAAAGAAAAGTGAAAGTGAAAGTCACTCAGTTGTGTCCGACTTTGCGACCCCATGGACTGTACAGTCCATGGAATTCTCCAGGTCAGAATACTGGAGTGAGTAGCCTTTCCCTTCTCCAGGAGATCTAGACCTGAGGTAGGCAGATTATGTCTAAATGGAGAGAGAGGGTTAAATTAAAACGATTCATGTCCTGCCATCTGCAGGTAGATGGACAATAGTTGGGGAGAAAGGGAGTCATGAAAGGAGCATCAGTAATGATAGGCATATAGTCCTTGCCCAGCGCTTGACCCTGCCTGACAGGTCCAACTAACACTGATGAAGATAGTGATTCAGGAGGCAAAGCAATGGGCCCTTTACACCTGTCACTTACAAGAAGGACCCTCTGCCATATTGAATGGCTGTTAGTATAACTGATGCCATCAGCGCCTCCTGTCCTTCAACTGACCCTACCTAGGGCTGTACTGTGTAGTAAATCTCTGTTGTCAAGGGCTTTGTAGTGAATAGATACTGTTTAGTGATCATTAGGTCCAGGTGGCCTCTGCACTCTTTATTATTGTTAGGCTCCAAACAATAATGAAGACCTTGGCTGACGTATTCCCAGTACCCAAGAGACTAGTTACCCGTTCATAAATCTTGACTTTGGAACGCACTTCCTGTTTTCCAAGCACATACCCTCGTACCCTAGGTTAACTATAAAAATCTCCAGTGGCAGCTGCAAATGTTTCCGGATGTCATCCATCCCATCCTACCCTCTAAGTAAACTACCCTATAATCTGATCGCTTGGTTGTATGAAGTGTCCTGCCTCATTTTTTGGTCTCAAGATATTTTCTCAGTTTGGTGGGCATGTTTTGTTCCTTCTGTCCAATAACACCTTGACCCCTCTCCATCAGGAAGACCTACCTCAGCATTTCAACCAATCAGTGTAAAGATCACCACATTTTCTGCAGATGTGACGTCTTTAAGTGTTTTGTTGTTTTAATCAGTAACCTTCAGAGGTAGTGAAGGACAGGGAAGCCTGTCATGCTGCAGTCCATGGGGTTGTAAAGAGTTGGATACAATTTAGCTACTGAACAGCAACAAACTACAAGCTTTTGTTTCCTGTGCAGTTTTTTAGTCTTTGAATCTTCTTCATAAGAGAATATTACGTAGTATTACTGAAATCTAACTCAAAGACTTTTTGTTGTAGTTGTCAACTATCTGAAACTCTTGATTCACCATTTATATGGTTTTTGTGGGAAGTGCATTTTAATTTCCATTTGTCCTTGAACTTTAGAACACAATATACACTAATTGGAGAAAATGTATCCATTTCAGTAAAGGTGGTAAGTTGCCTGTCCTAAGTTTTACTTAAATTTGGTTTTTGATAGATGAGGAAAGCAGAATATTATTATTTTTTTAATACAAAACTTGTATATTTTCTAGGATATTAATACCAAGGTATATACAATTTCATGAAGTTTGATTCCTTTTTATAACTTAAATGCTATTTATTTTCTTGGTATTGAACATGATCCAAAGTAGAGGTGTTATTACCCAAATCAATAAAGGAAGCAGGTGGAGGCTAACTTAGCCCAAGTCAGTTTTCAGTTATCTAGCTTCTTCTGATCTCTTCTTCC EMBV3_03188 CTACGAGGACGAAGTGTCCTTTCTGGACACGCACAGTCGCTACCACACGGTCCACGAGCT Gene GeneID:525562|NRTN:XM_002688885:127_cdna Constitutive 0 NULL GeneID:525562 7 GENE NRTN NULL neurturin EMBV3_32539 CACCTATTCTGCTGGACAAAATCTACAACCGGCCCAACGACTCTGTCAGTGAGCTCTGGA Gene GeneID:281443|RBP3:NM_174164:5_cdna Constitutive 0 NULL GeneID:281443 28 GENE RBP3 NULL retinol binding protein 3, interstitial EMBV3_29827 TGAAGTGACCGACTTCACCTCTTTGGAGGAAGTCCTACAGGACAATTTTGCTTCTCCTGA Variant GeneID:533055|ALMS1:XM_002691212:39_cdna 543^611 1 EMBV3_22754 GeneID:533055 11 GENE ALMS1 NULL Alstrom syndrome 1 EMBV3_02486 GAACGTGGTCATTTTAGGCCGCATTGTTGTTTCACACCAAGACCCTGGGACATTGTAACC Gene BVV0102_341028 + 0 NULL GK000018.2:44012658-44018756 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083315 TCONS_00083311 TCONS_00083312 TCONS_00083313 1 XLOC_051227 Coding TCONS_00083313 XLOC_051227 Coding Coding CEBPG 18:44005635-44015439 j TSS62634 2595 1 TCONS_00083313_2 149 4 0.735693155156585 0.00102188893411782 0.000450988627277247 0.000932388149450313 0.000491644680269746 0.0015987786793451 0.000281404730289333 0.00139079111493741 0.00112007667010182 0.000878918081746667 1.77543247805987e-14 6.79679383561664e-05 2.49155575468975e-25 0.000528633194919652 0.000644387388713081 0.00015450701317868 0.00362729754327427 0.000223699632731854 0.000882035693338326 0.0018748896124905 0.00074415633888324 0.000313725544804185 0.000914448882951514 0.000581745899501438 0.000980587356861081 0.00108604721902634 0.00111026722048428 0.00117257429322235 0.000249128382343095 0.000197306369389255 0.00017460853042763 XM_005219025.1 C/EBP PREDICTED: Bos taurus CCAAT/enhancer binding protein (C/EBP), gamma 0.0 2828 100.00 0.603853564547206 NM_001806.3 CEBPG Homo sapiens CCAAT/enhancer binding protein (C/EBP), gamma (CEBPG), 0.0 987 89.11 0.291329479768786 TCONS_00083313_2 sp|Q3T0B9|CEBPG_BOVIN CEBPG_BOVIN CCAAT/enhancer-binding protein gamma; 3e-105 301 100.00 0.993288590604027 1 coding 0 0 1 0 -0.042667200379438 0.699700719645198 -0.00202727754381789 0.969246604071405 GGCGGCTGCGGCGGCTGCGGCGGCGGAACGGGCGGAGGCAGCCGGTTTCGTAACCGTCGCTCCTCCTGGCTGACTCTCGGGCTGCGAGGCCTGGGTCGGGTCGGGCCGCGCGGTGCGGGGCCGCTTGGAGTGGAGGCCGCCTGGGAGCGGGCGGGCTGGAGGGGCCAGGTACATGTGAAGATTTCTTGGCAGTTCAGTGTGGAAACCATTGATCACCTTGTCTTCATTCTGCTTGTTCTGTGTTGACAAGGGAGCGTGCCCAAATGAGCAAGGTATCGCAGCAGAACAGCACTCCGGGCGTGAACGGAATAAGTGTCATCCATACTCAGGCTCATGCCAGCGGCTTACAGCAGGTTCCTCAGCTGGTGCCCGCCGGCCCTGGGGGTGGAGGCAAAGCTGTGCCTCCCAGCAAGCAGAGCAAAAAGAGCTCACCCATGGATCGCAACAGTGACGAGTACCGTCAGCGCAGGGAGAGGAACAACATGGCTGTGAAAAAGAGCCGGTTGAAAAGCAAGCAGAAAGCGCAGGATACGCTGCAGAGAGTCAATCAGCTCAAGGAAGAGAATGAACGGTTGGAAGCAAAAATTAAATTGCTGACTAAGGAATTAAGTGTACTGAAAGATTTGTTTCTTGAGCACGCACACAACCTCGCAGATAACGTGCAACCCAGTAGCACTGAAAATACGACAAATCCTGACAAGGCAGGACAGTAGAGCTCACCCCTTCCAAACTTCACACCTTGTGGCTTGAACATTTAAGGTTGACAAAAGGAATGGGGAACTGGCAAGTCGTGCGGAAGAGTCTTGGTTTTAATGGATATGGTTAATTGGATGAAAGAAAGCTGAATGCGACCTCTGTTCATCTATTTGTGACTCGTTTCTAAATTATGTATTAAAAATGCTTAGGGCTAATAGAAACCAATCACTTTATAATTTGGAGTGATTTTATGCTGGTGACAAGAGGCTGAGTCACATCAGACTTAAACAGTTACCAGCTGTCTTATTTGAACGTGGTCATTTTAGGCCGCATTGTTGTTTCACACCAAGACCCTGGGACATTGTAACCAGGATGCAGTTCAAGTTGCACCCTCAGGTGGATGGAAGAGTGGTGTCTGTGCCCTTCTGGTCAGCAGCAGACATCACAGTGCCCTGCAGCTCAGCAAAGCCATTAACAAAGGCCAAGAATCCCTTCTGCATGTGACACGAGCCCAGTATTGTCCCATGAGAGCCACCATCCCAGGATGGCTAACTCCCGATAGAGCCAGGAGACAGGATAGGGGTTGCTGTTAGGGTCCAACGTTGGTTACCTTGGTTGGAGTATCGATCAACTTGTAGGTTGATAGATGTTTTAAATAACTAGGAGATGCCCCAGAATCCTGCTGAATCTTCAGTAGCACCTCACTGGGGATGCAGTTAGGTCTCCTGAACCTTCAAGCGTCTATAAGAGGTGCTACAGACATTTTAATCTCTCTATTTACTAAACAGTATCTTTCAGAAATGAATGTCCACATGGAATTTATCCTTACCCATTATATGAAGTGACCTAACTATCTTGGAAAAGAAGCTTTAGGGAAATCATCAGGAATGTACTCAGTTATTTCAAATAAGAAAGTAAGATTGGAACTTTTGGAACAATTGATTCAAACTTTTCTTTTACCTATGCAAATCAGAACTAGCACAAGCAGTCGTGCAGTTTTATGCATAATGTAAAAAAATGTTAACCATGGCCTTGACTGTCTTACTGAAGTGTTTGGGAATGAAAGGTTTTCATTTGATAGGTTTATCAGTATAAAATGGAGGGAACCCAAGTATGGGGAATGGGCAAGTGTAGAGCTTTGGGAATTGTAAAGGACTTGTAACTTTTTTGTTCTGTAGGTTTCGTATGAACCATTAGGATATGACCTGCCTTTGCTGGCAGGTCTAGTGGTCTAGGAATTAGGCTTCAGTGTAAATTTCTAGCTGCCTCTGAGTCTTCTGGGGTGGGTGCTTTCTGACCGGTCCTGGCTGCGGGTGGTACCAGTGAACAGTGCTTCCTGCTGTCCGGTCCCTTTTAGTTACTGGGGTGTGAGCTCATGCTTTGGACATTCTTAGCAAGAAGTAGTAAGATTTTAATAAAATATGACCAGAACTTTGAAATTCAGGTCATGAGTGTGAAATTCTCAAATTTACATAAAGAAGTAGAAGTATGTACACTTTAATGTTTGAGGTTAAAAGGAAGGAAATCATAGCAGCTTTTGATGTTTCTTAATCCCCGTTAGAAGGTTTGAAGCTTTGTACCTGAACAACCCCGTTGAAGCACTAGGAGTGTTTTCGATGCCTTAGAAATAGAAAACTTTCGTCTGACAAAAGCTAGGAAGGAATAAAGTCCATTCTATAGCTGTTAGATCTGCCTCTCAGGAAAAAGTACTTGTTCTTTTTGTTCCTGGCTTTCCTCAGTTTGTGAGATAACTCTATTTTTTTAAATATAATTTTATTTCTTTCAATGGATTTGAAATAAAAAAAAAAAAAACTTTGGAATAATGCCTGTATTTCATTGTGGGTTTCTTTGTTAGATGCCAAGAAAGTAATCCAAGTTTGTTCGCCAGCTCTGAGGAGC EMBV3_32490 AGCAGTTCTAAGTGTTTATGAAGGATCTGCATGCTTGCGCCTCCCGACGTCTCAGAACAC Gene BVV0102_094401 + 0 NULL GK000009.2:103926889-103951028 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236524 TCONS_00236523 TCONS_00236530 TCONS_00236526 TCONS_00236520 TCONS_00236532 TCONS_00236536 TCONS_00236518 TCONS_00236517 TCONS_00236535 TCONS_00236533 TCONS_00236527 TCONS_00236516 TCONS_00236534 TCONS_00236529 TCONS_00236528 TCONS_00236531 TCONS_00236519 TCONS_00236525 1 XLOC_144498 Coding TCONS_00236516 XLOC_144498 Coding Coding MLLT4 9:103814950-103928649 j TSS177044 6090 1 TCONS_00236516_5 1432 31 0.946709704656195 0.00307245011416137 0.00191277800838646 0.00170793287063067 0.00138922228972547 0.00152369399669091 0.000992974619572191 0.000903286355419243 0.00124674052275111 0.00111660083526748 0.000298726270425869 2.42469493581015e-05 9.68125972771944e-05 0.000163062723146234 8.49445349124581e-05 0.00012550536935971 0.00735697891503973 0.0047433687648644 0.00488696225341552 0.00132007934560198 0.00204302344621864 0.000405659457434495 0.00212529442866257 0.00175110434625011 0.00265505108337741 0.00274809967859825 0.0021217161890394 0.00143243791094291 0.000847285933332895 0.000761087038257899 0.000917235134114448 XM_005211143.1 MLLT4 PREDICTED: Bos taurus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 (MLLT4), 0.0 6578 99.84 0.601477832512315 XM_005266995.1 MLLT4 PREDICTED: Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 (MLLT4), 0.0 3957 84.06 0.599343185550082 TCONS_00236516_5 sp|P55196|AFAD_HUMAN AFAD_HUMAN Afadin; 0.0 2372 90.94 0.875 4 coding 0 0 0 0 0.0428550235131206 0.695086593925152 0.00571951477482696 0.908048173098035 GGAAATCTCGCTTGCCTTCGGCCTGGGACAATGGATTTGGAGTTCCACGGAGTGATGAGGTTTTATTTTCAAGATAAAGCCGCCGGGAACTTCGCCACGAAATGCATCCGGGTGTCCAGCACCGCCACCACCCAGGACGTGCTGGAGACGCTGGCCGAGAAGTTCCGCCCCGACATGCGCATGCTGTCGTCCCCCAAGTACTCGCTCTACGAGGTGCACGTCAGCGGAGAAGAAAGAAGATTGGATATAGATGAGAAACCCCTGGTGGTGCAGCTGAACTGGAATAAAGATGACCGAGAGGGCAGGTTTGTCCTTAAGAACGAGAACGATGCTGTTCCTGCAAAGAAGGCTCAAAGTAACGGACCTGAAAAGCAGGAAAAAGAAGGCGTCATCCAGAACTTTAAGAGAACTCTCTCAAAGAAGGAGAAGAAGGAAAAAAAGAAGAGAGAAAAAGAGGCAGTGAGACAGGCGTCTGAGAAAGATGACAGACCTTTCTCTGGGGATGACACTGAGAATTCTCGCCTGGCCGCTGAGGTCTACAAAGACATGCCTGAGACCAGCTTTACGCGAACCATCTCCAACCCTGAGGTGGTCATGAAGCGGCGGCGGCAGCAGAAGCTGGAGAGGAGGATGCAGGAGTTCCGGAGCTCGGACGGGCGGCCAGACTCGGGTGGAACATTGAGAATTTACGCAGATAGTTTAAAACCAAATATTCCCTACAAGACGATCCTGCTGTCCACTACAGACCCTGCGGACTTTGCTGTGGCCGAAGCCTTGGAGAAGTACGGCCTGGAGAAGGAGAACCCCAGGGACTACTGCATCGCCCGTGTCATGCTTCCTCCTGGAGCCCAGCATTCGGATGAAAAAGGTGCTAAAGAAGTTATTCTTGATGATGACGAATGTCCTTTACAGATCTTCAGGGAATGGCCGAGTGACAGAGGGATTTTAGTCTTTCAGTTGAAGAGGAGGCCACCAGACCACATCCCAAAGAAAAGTAAGAAGCACACGGACGGGAAGCCCCTGCAGGGGAAGGAGAGAGCCGATGGGTCGGCCTACGGCTCCGCCCTGCCCCCCGAGAAGCTGCCCTACCTCGTGGAGCTGAGCCCGGACGGTTCTGACTCCAGAGACAAGCCAAAGCTCTACCGCCTTCAGCTCAGCGTCACGGAGGTGGGGACCGAGAAGTTCGACGACAGCTCCATCCAGTTGTTTGGTTCAGGCATTCAGCCCCATCACTGTGACCTCACGAATATGGACGGGGTGGTCACGGTCACGCCGAGAAGCATGGACGCTGAGACCTACGTGGATGGGCAGCGCATCTCGGAGACCACGATGCTGCAGAGCGGGATGAAGGTGCAGTTCGGGGCGTCCCACGTGTTCAAGTTCGTGGACCCCAGCCAGGACCACACGCTCCCCAAGAGATCCGTGGACGGGGGCCTGACTGTGAAGGGCCCCAGACATAAGTCTGGAATTGTTCAGGAGACAACTTTTGATTTAGGAGGAGACGTTCACAGTGGAATGGCCTTACCAGCGAGCAAGAGCACCGCCAGGCTGGACAGCGACAGGACGCCGTCCACCTCCAGCACCGCCGAGCGGGGGATGGTGAAGCCGATGGTCCGCGTGGAGCAGCAGCTGGACTACCGCCGGCAGGACAGCAGAACTCAGGATGCTCCCGGGCCTGACCTGATTCTGCCTGCAAGCATTGAATTCAGGGAAAGTTCTGAAGATTCCTTTTTATCTGCCATTATAAATTACACTAATAGCTCTACAGTCCATTTTAAGTTGTCGCCCACTTACGTGTTATACATGGCCTGTCGGTATGTATTGTCCAGCCAGTACAGACCCGACGTCAGCCCCGCGGAACGCACGCACAAAGTCATGGCCATCGTCAACAAGATGGTGAGCATGATGGAAGGGGTGATCCAGAAACAGAAGAACATTGCAGGGGCCCTTGCCTTCTGGATGGCCAACGCGTCCGAGCTGCTCAACTTCATCAAGCAGGACCGAGACCTCAGTCGGATCACACTGGATGCACAGGACGTCCTGGCACACTTGGTGCAGATGGCCTTTAAGTACCTGGTTCACTGTCTTCAGTCAGAGCTGAATAATTACATGCCCGCTTTTCTGGACGACCCCGAAGAGGACAGTCTGCAGAGACCAAAAATAGACGACGTGCTGCACACGCTCACGGGCGCCATGTCCCTGCTGCGTCGCTGCCGGGTCAATGCCGCGCTGACCATCCAGCTCTTCTCCCAACTCTTCCACTTCATCAACATGTGGCTGTTCAACCGGCTGGTGACCGACCCCGAGTCGGGGCTCTGCTCCCACTACTGGGGTGCCATCCTCCGCCAGCAGCTCGGGCACGTGGAGGCCTGGGCCGAGAAGCAGGGCCTGGAGCTGGCGGCTGACTGCCACCTGAGCCGGATAGTGCAGGCAACCACTTTGCTTACGATGGATAAGTACGCACCTGATGACATTCCAAATATAAACAGCACCTGCTTCAAGTTAAATTCACTGCAGCTCCAAGCCTTACTGCAGAATTACCACTGTGCACCCGATGAGCCTTTTGTCCCTGCGGACCTGATCGCGAACGTGGTGGCCGTGGCCGAGAACACAGCAGACGAGCTGGCACGCAGCGACGGGCGGGAGGTGCGGCTGGAGGAGGACCCTGACCTGCAGCTGCCTTTCCTCCTGCCTGAGGACGGCTACTCCTGTGACGTCGTCAGGAATGTCCCCAGCGGCCTGCAGGAGTTCCTGGACCCTCTCTGCCAGAGAGGGTTTTGCAGGTTAATTCCTCACCCACGCTCTCCAGGCACCTGGACGATATATTTTGAAGGTGCAGATTACGAGAGTCACCTTTTGCGGGAGAACACAGAACTGGCACAGCCTCTGCGTAAAGAACCTGAAATCATCACTGTGACCCTCAAAAAGCAGAACGGAATGGGCCTTAGCATTGTTGCTGCAAAGGGCGCTGGTCAAGACAAACTTGGGATTTACGTCAAGTCCGTTGTGAAAGGAGGCGCTGCGGACGTGGACGGGCGGCTCGCCGCGGGTGACCAGCTGCTCAGCGTGGACGGACGGAGTCTGGTGGGACTCTCTCAAGAAAGGGCAGCAGAACTGATGACAAGGACAAGCTCCGTCGTGACGCTTGAAGTAGCAAAGCAAGGAGCCATTTACCACGGCCTCGCCACCCTGCTCAACCAGCCTTCCCCTATGATGCAGAGAATTTCAGAGCGCCGTGGGTCAGGTAAACCCCGACCAAAAAGCGAAGGCTTTGAGCTGTACAACAACTCGGCTCAGAACGGGTCCCCGGAGAGCCCGCAGACGCCCTGGGCCGAGTACAGCGAGCCCAAGAAGCTGCCGGGCGATGACCGGCTGACGAAGCACAGGGCAGACCACCGCTCCAGCCCCAACGTCGCAAATCAGCCTCCCAGTCCTGGCGGGAAGAGTGCGTATGCCTCCGGAACAGCAGCCAAGATCACATCTGTCTCCACGGGGAACCTCTGCGCTGAGGAGCAGACGCCTCCGCCCCGCCCCGAAGCCTACCCCATCCCCACGCAGACGTCCACCAGGGAGTACTTCACCTTCCCGGCCTCCAAGTCCCAGGACCGCGTGGCGCCCCCGCAGAGCCAGTGGCTGGGTTTCGAGGAGAAGCCCCACGTGCTGGCAGACGGAAACCACTCCAGCGCTGCCGTCCAGGATGAGGAGCGGCGGCGGCAGCAGCAGCTGGAGGAGATGCGGACACGGGAGGCGGAGGAGCGCGCGCGGCAGGAGGAGCAGCGGCGCCGGCAGGAGGACGAGCGGGTCAGGCGCGAGGCCGAAGACAAGAGGCGGCAGGAGGACGGCTACTACAGCCGCCTGGAGGCCGAGCGGCGCCGACAGCATGAGGAGGCCGAGCGCCGGCTGCTGGAGCCCGAGGAGCCGGGCCTGGGCCGCCCGCCACTCCCGCGCGGCTATGAGCCCGCCGGCCCGCCGCCACCGCCCCAGCGCACCGCCTCCTACCTGCAGACGCAGGCCTTCTCCCCGGACGCCCTCTACACCGCCAAGTTCGTGGCCTACAATGAGGAGGAGGACGAGGACGAAGAGCCGGCAGGAGCAAACTCTTACGTGGGACCTGCTGGGACAGTTTTTGGAGCCCATGATGTTTATCGGGACCCGAGAGAGAGACCGCCTAAGAGCCACGAAGCAGATGTCCCCGGGGGTCCCGGAGCCCCTGAAAACCTGACGTTCAGGGAGCGCCAGCGCCTTTTCTCCCAAGGCCACGATGTCTCCAATAAAGTCAAGGCCTCTCGCAAGTTAACAGAGCTGGAGAACGAGCTGAACACGAAGTAAGGTGGCCCTGTGCCCAGCCCGGCCCCTCGGGGTCCTGGTGACGGCGCCGCCTGAGGACCCAGGTCCCAGGGAGCCTGCTTCTGGAAGGCTTGGCATGTGGAAGAGTTCCATCACTAAGAAATCGCGCTTTACTTTCCCAAGAGGTTGTCATTTCTACAGTCTCTAGACACTGTCTTCTTAATGACCTGACTCCCAGGAAAGTAGCTTTCTGGTCAGTCTCTTTAGAGTCTGGGTTTGGAAAGGGGCAGAAGACGACCCTGAGATGTGTCTTCGCCCCCGTCTCCCCCCAAGGAGCGCAGAGAAGTCCTGTTTCTGTTCTTTTTCTAAAACTTGCTGTTCACTAATCAGAGTAGCTTGAACTCCGCAGACTGTCGTTCGCGCTATGTAGCGGCAGCTGCAGGAGGGTCAGCGTGGCCTCAGGGAGACGCGCGGACGTGCGCCTGCCAAGGAGTGCTGGCCTGCCGTGCCCGCAGCTGGGAGGCAGGCGGGCCTGAGCGTGACTGCTGCGGCGCCATCCCCACGGGCAGCCCTCCAAATCAGCTCTAGTGTTCGATTAAAACAAGTTTCTCCAAGAAGACAATTTTGAGGATTTAAGCTTAGAAAATTTTATTTTTATAAATACCAGATGATTATTATGCCAATAAGTCATTAGTGATTTTGAAGATGGCGCGTAAGTTAGAAAGTTAGCTAAATGTTTCAACTCTTCCAAGGGAATCTGTACAGGAGGATGTCTGCTAACATGTTGGCGTGAATGGGAACCAAAGTACCTGAGAAGGATGAGAGCTCAGTAGGCAACGCTCGCGCACGGCTGTCGCTCAGAAAGTTAAACTCAGAAGAGAACTGGATTTATACCGATCTGCTGTCAGGGAAGGAAGGGTCCATTGCGTATGGCATCTGTAACTGAAATACTGTAAGAGAGACTCGTGGCAGTTCAGGCTATTTTTTTACATTCGAATAGAGTTATTTAATTTTCATGTATTGAATTATTAGTTAGCACTGTCACTTCCTCAGCTGTGAATATGTGGCTGGTGTTGGGGAGACGGACCTCACTTTGTTTTATATTATGTGATGTTAAAACAGTCAGTGATTTTGTGATCATGAGCAGATTTTCTATCTGACAAGCCCTGCTGCGGCTCTAGGTGACGACTTCACCGTATTGTTCTCTTAACGATAGGTGTGTTAGGAAGATACGCACACTTCCAGAAGGGGGGGCGTCTGCCCTAGAAGTCACTTTCCTCAGAGCTGTGAGATAAGTCATTACAGCGCACGTGTACATATTTTCTGTGTCCGTCAGCGTTCGTATCTGGAAGTGTGCTTCTCTCATTTCCCTCGTCAAGTAAGAGAGTAAGCAGTTCTAAGTGTTTATGAAGGATCTGCATGCTTGCGCCTCCCGACGTCTCAGAACACTGGCAGCCTTACGGAGACTGAATCCACAGCTTCTTTAAAGAGAAAGATGCAGGTGAACTGTTATCCTGTTAATATATAGAAAACAACAGACACACATGAGTACATGCAAATACGTGTGAATATTTACACGCAGGGATATCTCTATGTGTGATTGTAAGCCCGTTCCCGTGGATGTGGCCGTCCTTGGACAATTAGGTCAAATGTGAATATGTGTAAAGTGCTTTTCATGACTGTGCGTTACTATGGAGACGACATCAGACCTGCTGTAGTTTTCCATTTCTACTGTATTTCATTTGCAGCCTATTTTTAATAAACTTTGTATGTATTTAAGGGTATTTGCTATCATATTAACAG EMBV3_23199 GAGTTGTCAGACCATCCGTCCCCCATTGCGCGAATCAGTCCACCATGTTTTCATACGGTT Gene BVT0101_047621 + 0 NULL GK000007.2:16312789-16342923 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18724 CAGACAGGTGGCGTATATCTATGTGCATATGGGCTTGGTCACTTCGGTCATGTCTGACTC Gene BVT0102_311670 + 0 NULL GK000017.2:28168207-28695757 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18513 CCCGCCCACTGCCCTAGAACTTCCTTCTCAGCACCCAACTACTGCAACCGCTGTGGGAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43283 GCAACCCTCTAAAACTGCTGTAATCAAGAGACCCTTTCCCAGGGTAACCAAACAGCCTGG Gene BVV0101_041450 + 0 NULL GK000002.2:119932195-119987530 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39987 CAACCCCACCACCAGAACGTGTCTGTTCCCAGTAACAACGTCCACGCTCCATATTCTAGT Gene GeneID:537290|TWSG1:NM_001076089:161_cdna UTR3_Alt 2 NULL GeneID:537290 24 GENE TWSG1 MGC139157 twisted gastrulation homolog 1 (Drosophila) EMBV3_28653 GAGTGAAGCCAACATTAAACACGAGCGATGATGGCACCGAACAGGCGTTCCACCCCCTGA Gene GeneID:511767|EEPD1:NM_001034409:42_cdna Constitutive 0 NULL GeneID:511767 4 GENE EEPD1 KIAA1706 MGC128525 endonuclease/exonuclease/phosphatase family domain containing 1 EMBV3_10328 TGTCAGGAGCCACCACAGCAACACTTCTTCTCCAAGCATGACAACCGCACTTCCTTCGAT Gene GeneID:768026|MGC137053:NM_001077085:334_cdna Constitutive 0 NULL GeneID:768026 22 GENE MGC137053 NULL hypothetical protein MGC137053 EMBV3_31006 AGGCTCCCAAACCAGTTTAGTCTAGGGTTAAAACACAGAAGAGTATTAAGTGAGTGGGGG Gene BVT0102_283250 + 0 NULL GK000003.2:33944924-33952104 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176844 1 XLOC_106618 NonCoding TCONS_00176844 XLOC_106618 NonCoding NonCoding - 3:33946355-33948181 - TSS131603 1826 1 TCONS_00176844_4 112 0.32420591456736 1 0 0 0 0 0 0 0 0 0 0 0 2.38195827188588e-05 3.91642812158627e-06 0 0 5.37371279413462e-06 0.00250230519028214 0.000254580450961488 0.000288559146374274 0 0 0 8.12779371685435e-06 5.52653399367553e-05 0.000752848238902464 1.51773796395976e-05 0 0 0 1.06344304135967e-05 2.30481007242019e-05 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 9e-68 262 88.04 0.112814895947426 0 noncoding 0 0 0 0 -0.222428917417053 0.136221075137023 -0.0342862814363312 0.574913855073765 TGTTCATAACTGCAATGTTTATCACATAGAAAGGTTGGAAACTTAAAAGCCCAACAACAGGAAAATGTTTAAATTATGTCATATGCACACAATGAAATACAACCATTAAAAATTGTTCTGAAGAATTTCTTAATAAGGTGAAAATGTTTACAACGTAAAATTAGGGTGGAAAAAATGGGTGCAAAAATCTGTACAATACAGTATGGTCCTAATTAAGTGACACATATGCATAGAAAATAACCACATCAACAAATTTAACAAATGATTATCTGTGAGTGGTGGAATTATGGGTTATATTTATTTTCTTCTTTATGTTTACTTGCATTTTAAAAACTGTCTACCATGCATATCCATTATTTTTATAATCAAGGAAATGGAAAGCAACAGAAGTCTATGAAAATCTCTAATAGCCTCTACACCCCACTCACTTAATACTCTTCTGTGTTTTAACCCTAGACTAAACTGGTTTGGGAGCCTTTAAGAATTTTGAGGCTGCTGCACTCTCAACAATGAATAATAAAATAAATCTAAAAAAAAAAAAATTTAAAAATCAAGGACCAGGTAAACCATGCAGAATGTCATCTATATTGTGCTTGCACTAAATCACTTCTGTTGTCTGACTCTTTGTGACCCCATGAACTATAGCCCGCCAGGCTCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATACCCTTCCGCAGGGGATCTTCCCAACCCGGGGATCAAACCCATGTCTCTTATATCTCCTGCATTGGTAGGCGGGTTCTTTACCACTAGCGCCACCTGGGAAGTCCCTGGGAAGTCATCTATATTGATATAATGCAAATTTTGACATAGTTTTATGGGGAGGTATCTTGCATTGAACCAGGTCTTTTTAGGACTCCCCCTTAATCCAGACCTACCTACCTAACCAGCCCGTAGGTGGCAAGGCTAACCAGTCCACTAGTCTCTTCCTTTCCCTCCCTAGTCCTATCTACAGCACACCCTTCACCCTGTAATCCTCCCTATTTCTAGGCCTTTTTGTATGCTGTCCCTGCTAGAAGTCTGCACTGATTACAGTTAAGCAGCATTCTCCCCACCTACACATTATCAGCAAGAATCTTGGTGGGATTTCACTGTCTATCTAGAACAGTTCGGGAAATGAAGGAGTGAGTCATTCTCTCCAACCTCTAGCTGTTTTCATGTTAGGGACCGAATGTTGTCTTTGAGCCTCTGAGATCTTCCTTAGCTTGAAACAAGCTTCCTTACCTCCTAGCCTGGAACCAAGATGGTTTCTTGAATGGCTCTCCCTGAGCCCCAGGCCTCACTGACAATGCACTCATCTCTGAAGAACTGCTTATCTTCTTGCCTGATGCTCATTTGTGATGTCAGCCTCCTACCGAGGACAGACCACTCTCAGCAGATGGTAGGCCTGGGAGAGAACACCGGCAGCCTCAAAGAGATCATTGGCCATGACACTTTCCCAAACCATACCTTATGCCTAGATCCTTCTAGAATCAAGCTGTTCAGCTCTTTTTCTCAGCTTCTATCGGAAGCCAGCCCCCCACCCAGCCACCCAGCATTGTTTATGGCAACATGCAGCAGTATCCAACCATATTTGTTTGTAAGTCTTCAATGAGCTTTAGCCAAACCTTTGTCATTCAAGGCCCTTCACTGGCTAGCCTCACTTTTCCTTGTTTCATCTCCCAGCTCTTCCCTCCATGCACTTTTCACTTTTACTCCAGTCCCATCACATCAAACTTGCCAGTCTTCTCCAAGCACACTTTGTACCTCTTGTCTCCATGCTTTTTCTCATGCTCTTTTTTCCTCC TCONS_00172962 TCONS_00172963 . 5' 1433 TCONS_00172962 TCONS_00172963 . 5' 1433 EMBV3_21827 GGACAGAGGTTCATGACATTGTACAGGAGACAGGGATCAAGACCATCCCCAAGAAAAAGA Gene BVV0102_068565 + 0 NULL GK000001.2:15620356-16570203 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229800 TCONS_00178770 TCONS_00180221 TCONS_00240591 TCONS_00037665 TCONS_00167835 TCONS_00137089 TCONS_00167538 TCONS_00188502 TCONS_00230510 TCONS_00238934 TCONS_00022848 TCONS_00231812 TCONS_00030341 TCONS_00185761 TCONS_00038451 TCONS_00156644 TCONS_00207813 TCONS_00022660 TCONS_00232023 TCONS_00200892 TCONS_00240081 TCONS_00122882 TCONS_00038157 TCONS_00226677 TCONS_00170142 TCONS_00116551 TCONS_00035310 TCONS_00248101 TCONS_00080543 TCONS_00239620 TCONS_00233711 TCONS_00223958 TCONS_00007222 TCONS_00226676 TCONS_00175316 TCONS_00107388 TCONS_00253925 TCONS_00175155 TCONS_00122300 TCONS_00230631 TCONS_00222370 TCONS_00148962 TCONS_00240565 TCONS_00243220 TCONS_00122398 TCONS_00040578 TCONS_00190425 TCONS_00157719 TCONS_00089257 TCONS_00079389 TCONS_00229836 TCONS_00198269 TCONS_00022600 TCONS_00253911 TCONS_00035308 TCONS_00087852 TCONS_00039303 TCONS_00063565 TCONS_00231250 TCONS_00250737 TCONS_00176009 TCONS_00066218 TCONS_00177914 TCONS_00231294 TCONS_00017524 TCONS_00149641 TCONS_00210711 TCONS_00201666 TCONS_00141480 TCONS_00111187 69 XLOC_139294 XLOC_108543 XLOC_109990 XLOC_147255 XLOC_021495 XLOC_102671 XLOC_083299 XLOC_102374 XLOC_114545 XLOC_140000 XLOC_145600 XLOC_013518 XLOC_141300 XLOC_016594 XLOC_111814 XLOC_022275 XLOC_095104 XLOC_126328 XLOC_013330 XLOC_141511 XLOC_122543 XLOC_146746 XLOC_074436 XLOC_021983 XLOC_138059 XLOC_103517 XLOC_070718 XLOC_020884 XLOC_151488 XLOC_049427 XLOC_146285 XLOC_143192 XLOC_137254 XLOC_002784 XLOC_105098 XLOC_063298 XLOC_156863 XLOC_104938 XLOC_073855 XLOC_140121 XLOC_135679 XLOC_090840 XLOC_147229 XLOC_149883 XLOC_073953 XLOC_024394 XLOC_116460 XLOC_096174 XLOC_054042 XLOC_048274 XLOC_139330 XLOC_119926 XLOC_013270 XLOC_156849 XLOC_052641 XLOC_023120 XLOC_038292 XLOC_140739 XLOC_153680 XLOC_105788 XLOC_040932 XLOC_107687 XLOC_140783 XLOC_009057 XLOC_091515 XLOC_129221 XLOC_123311 XLOC_085908 XLOC_067087 Coding TCONS_00122398 XLOC_073953 Coding Coding - 21:7014236-7017701 - TSS91157 3465 2 TCONS_00122398_6 162 0.999134199134199 1 0 0.000585063789679719 0.00133028532566571 0.000609788916453181 0.000624308497602406 0.00073401160528929 0.000200252401671131 0.000626425269143257 0.000349032436503999 0.00159392940138531 7.83712933799993e-05 3.93092567665752e-05 1.24693152206138e-06 0.000143947124633393 0.000278438333232553 0.000169534072105345 4.57343504794127e-05 0 0 0.000637588180278657 0.000974569220305688 0.000302463247050511 5.35402974725164e-06 0 4.83829113148253e-06 0.000540658716267424 0.000418807931195365 0.00054565641174357 1.38603259552188e-05 4.20312405404202e-06 2.31351667898023e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1353 84.88 0.333621933621934 NR_047679.1 UGDH-AS1 Homo sapiens UGDH antisense RNA 1 (UGDH-AS1), non-coding RNA. 3e-58 232 68.22 0.192784992784993 TCONS_00122398_6 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-06 47.8 22.86 0.777777777777778 1 coding 0 0 0 0 -0.771351067419945 0.0405011737901622 0.0376261617141226 0.472326582819497 NNATTTTTTCATTTGTAATTTTTTTGATTTGGGTCCTTTCTTTTTTCCTTGGTTAGTCTAGCCAAAGATTTGTCTAATTTTGTTTATCTTTTCGAAGATCCAGTTTTTAGTTTCTTATCTTTTTAGTCTCTATTTCATTTTATCTCCTCTAATCTTTCTTTCCTTTCTTCAACTAACTTTGAACTTAATTTATTCTTCTTTCTGTAGTTCTTTGAGGTGTAAAGTTAGGTGGTTTATTTGAATTATTTCTTAATGTAGGTGTCTATTGCTGTGTGTTTTCCTCTTAGATCTGCTTTCTCTGCAACACATACATTTTGATACGTTGTGTTTTCATTTTGGTTTGTGTCAAGAAACTTATCTGTCTCTCTTTAAAAAGATCATATACCATGATCAAGTCAGATTTGTTCCAGGAATGCAATAATTCTTCCATATATGCAAATCAATCAATGTGATACACCATGTTAACAAATTTAAAGCTAACCATATGATAATCTCAATAGATGCAGAAAAAGCTTTTGACACAATTCAACCCCATTTATGATTAAAAAAAACTCCTTAAAAAATGGGTACAGAAGGAACCTACCTTAACATAATAAAGGTCATATACAACAAACACAGCAAACCTTATTCTAAATAGTGAAAACCTGAAAGCATTCCCTCTGAAATCAGGAACAAGACAAGGGTGCCCACTCTCACCATTATTACTCAACATAATTTTGGGAATCCTAACTATGGCAGTCTGAGAAGAAAAAGAATAAATGGAATCCAGATTGGAAAGAAAGAAGTAAAACTCTCACTATTTGCAGATGACAGATTCAAATAGATGACTGTTTACAGATACTGTACATAGAAAACCCTAAAGATACTGTCAGAAAATTATAGAGCTAATCGGTGAATTTAGTAGCATTGCAGGATACAAAATCAATACACAGAAATCACTTGCATTCCTATACACTAAAAATGAAAAATCAGAGAAATTAAGGAATCAATCCTACTTACTATTGCAACAAAAAGAATAGAATATCTAGGAATAAACTTATCTAAGGAGACATGTAAAGATGCTGTAAAGAACAATATCGCATAGGAACCTGGAATGTTAGGTCCATCAATCAAGGTAAATTGGAAGTGGTCAAACAGGAGATGGCAAACGTGAAAATGGACATTTTAGGAATCAGTGAATTAAAATGGACTGGAATGGGCAAATTAACTCAGTTGACCATTATATCTACTACTGTGGGCAAGAATCCCTTTGAAGAAATGGGGTAGCCCTCATAGTCAAAAAGAGTCTGAAATGCAGTTCTTGTTTGCAATCTCAAAAACGACAGGATGATCTCTGTTCATTTCCAAGGCAAACCATTCAATATCATAGTAATCCAAGTCTATGCCCAAGCAGTAATGCTGAAGAGCAAGTTGAACAGTTTTATGAAGACATGCAAAACCTAGGACTAACACCCTAAAACGATGTCCTTTTCATCATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAGATACTGGAGTAACAGGCAAATTTGGCCTTGGAATACAAAATGAAGCAGGGCAAAGAGTTTTGCCAAGCAAATGCACTGGTCATAGTAAACACCCTCTTCCAACAACACCAGAGACGACTCTACACATGGACATCACCAGATGGTCAATACTGAAATCAGATTGATTATATTCTTCACAGCCAAAGATGGAGAAGCTCTGTACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGTCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTTAAATTGAAGAAGTAGGGAAAACCACTAGTCCATTCAGGTATGACCTATATCAATCCCTTATGGTTATACAGTGGAAGTGACAAATAGATAAGGGATTAGATCTGATAGACAGAGCACCTGAAGAACTATGGACAGAGGTTCGTGACATTGTACAGGAGGCAGGGATCAAGACCATCCTCAAGAAGAAGAACTGCAAAAAGGCAAAATGGTTATCTGAGGAGGCCTTACAAATAGCTGAGAAAAGAAGAGAAGTGAAAGGCAAAGGAGAAAAGGAAAGATATACCCATTTGAATGAAGAGTTCCAAAGAATAGCAAGGAGAAATCAGAAAGCCTTCCTCAGTGATCAATGCAAGGAAATGGAAACAATAGAATGGGAAAGACTAGAGATCTTTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGCAAAGATGGGCACAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACAAAGAAGAACTATACAAAAAAGATCTTCATGACCCAGATAATCACGATGGTGTGATCAGTCACCTAGAGCCAGACACCCTGGAGTCTGAAGTCAAGTGGACCTTAGGAAGCACCACCACAAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTTCAAACCCTAAAAGATGATGCTGTTAAAGTGCTGCACTCAATATGCCAGCATATCTGGAAAACTCAGCAGTGGCCACAGGACCAGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAGGTTCAAACTACCACACAGTTGCACTCATCTCATATGCTAGCAAAGTAATGCGCAAAATTCTCCAAGTCAGTCTTCAACAGTATGTAAACTGTGAACTTCCAGATGTTCAAGCTGGATTTAGAATAGGCAGAGAAACCAGAAATAAAATTGCCAACATCTGTTGGGTCATTGAAACAGCAAGAGCATTCCAGAAAAATACCTGTTTCTGCTTTATTAACTACGCCAAAGCCTTTGACTGTGTAGATCACAACAAACTGGAAAATTCTGTAAGAGATGGTAACCAGATCACCTGACCTGCCTCCTGAGAAACCTATATGCGGGTTAGGAAGCAACAGTTAGAACTGGGCATAGAACAACAGACTGGTTCCAAATCGGGAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATGCAAAATGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAACCTCAGATACACAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAGAGTCTCGAGGATAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAACATTCAGAAAACTAAGATGGCATCTTGTCCCATCACTTCATGGCAAATAGATGGGGAAACAATGTAAACAGTGACAGACTTTATTTGGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGTCTGCTCTTTGGAAGAAAAGCTATGACCAACCTAGACAGCATGTTAAAAAACAGAGACGTTACTTTGCTGACCAAAGTCCATCTAGTCAAAGCTATGGTTTTACCAGTAGTCATGTATGAATGTGAGAGTTGGACTATAAAGAAAGCTGAGCACCAAAGAAT TCONS_00120438 . 5' 2125 TCONS_00120438 . 5' 2125 EMBV3_01379 GAGAGGAAAGGGTGAAGGGAATATAAACAAGTAGAACATAGGGGTGATGGCTAGGTGGGG Gene GeneID:515314|TOX4:NM_001075707:61_cdna Constitutive 1 NULL GeneID:515314 10 GENE TOX4 MGC139878 TOX high mobility group box family member 4 EMBV3_20305 GGTCCTGCCTAAATTCAATGAGCTAGGCCAATAAAGGCTGAACCAAGGAGATTTCATTCT Gene GeneID:282235|GABRA1:NM_174540:5_cdna UTR3_Alt 2 NULL GeneID:282235 7 GENE GABRA1 MGC137550 gamma-aminobutyric acid (GABA) A receptor, alpha 1 EMBV3_16023 GGGAGCATCACTGGCTGACATGCTGGTCAGACGAGAACCCCAAGCAGCACGTGCCCCTGG Variant GeneID:614320|IAH1:NM_001034758:219_cdna 170^318 1 EMBV3_10256 GeneID:614320 11 GENE IAH1 MGC128806 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) EMBV3_05086 GGCCCAAAAGTTTGTTCGGATTTTTTAGAGATGTAACATAAAGACCTGAATGAACTTTTG Gene GeneID:100313124|MIR2284S:NR_031037:19_cdna Constitutive 0 NULL GeneID:100313124 12 GENE MIR2284S bta-mir-2284s microRNA mir-2284s EMBV3_35078 CTGCCGCCACCACAAGCTATGCATTCTACTCGGTGTTTCCAGTGAGCTTGATGTCTTGCT Gene GeneID:540107|PACSIN2:NM_001046468:198_cdna Constitutive 0 NULL GeneID:540107 5 GENE PACSIN2 MGC137898 protein kinase C and casein kinase substrate in neurons 2 EMBV3_34288 CAAGGAGAATCCAAGAAGATACGATTGTAAATACTTCTGCACCGAACATCAGAGCACCGC Gene BVV0102_131191 + 0 NULL GK000030.2:108332165-108381851 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12855 ACACAGCCTGAACTGAACCAACTGACACAGCGGGGCTTGGCTTCTTCTATGTCAGGATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35187 TTGATCATTTGCAACGAGACAACGATTATGGCTATGTGGCTTGCCAAACATCTGAGCACC Variant GeneID:615606|LOC615606:XM_002691652:380_cdna 188^237 3 EMBV3_25096 GeneID:615606 11 GENE LOC615606 NULL similar to Putative adenylate kinase-like protein C9orf98 homolog EMBV3_13422 GTAAAACTCCAGGGTGTGCCCTGAATTAAACCGGAGGAGGGCTAGGGAAGACGAGTACAA Gene BVT0102_092075 + 0 NULL GK000009.2:73310870-73579949 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241636 1 XLOC_148300 NonCoding TCONS_00241636 XLOC_148300 NonCoding NonCoding - 9:73312049-73312812 - TSS181314 763 1 TCONS_00241636_1 57 1 0 0 0 0 0 0 0 7.64312600881108e-06 0 2.06818331755426e-05 0 0 0 2.63237043756465e-05 0.00212697359868695 0 0.00017307748410926 0 0 0 0 0 0 0 0 0 0 0 0.00044060498019407 0 0 0 noncoding 0 0 0 0 0.0527323077653177 0.66393463715712 0.0400572736468732 0.408781627034272 GGGGAGGGGGCGGAAATAAAATTCGTCTCTGCACTAAGGGGAAAAAAAAAATCTGCATTTCACTTTTTTTTTTTTTTTTCCTAATGTAATCTTTGGGAACATTCTGTCCTTTCAGCATGTAATTTTTCCCCTTGCATTTTTAATCCCCACCATGCTAAGAACACGTGAGGAGGTGGCAACTTAGGGGACCGACCTGGCGTGACCCCGGATTGATGCGCAGCCGGCACCGCGGGCACCATCGACTCCCAAGGTTCCCTCTCCCGCTCCCCGAACTGAAAACTCCGCTAGGTCGCACCCCATAGTCTTAGTTTGTACTCGTCTTCCCTAGCCCTCCTCCGGTTTAATTCAGGGCACACCCTGGAGTTTTACCACCTTGCTCTTTCTCTAGAGTCCCTGGTAACTGTGACTCCTGAAACATTGGCCGGGCGCCTCCTCCGCTCCAAAAAGCAAAGGAGGGAGAGGAGCGCTGCAGAACCGCCGTGCGGTGCCTTTCAGTAACCCCGCCGCTCGGAGATGCCTGGGAGCTGCAGCTTGACCGCCGGTGCGAGGACTCGCGCCAGCGCCGGCAGGGAAGCCAGGAGCATAGCGACTGGGCCAGGAGCCGGGAGGGGGCTGCAAGCTATTAAGTTCGCAGGGTCGAGCGCCTGGCGCTGGTCAGCGATGTCTGCGGCGGCTGCCCTGCCATGACCCCTTACTTGCCAACGGCCTTGCCATTTTAAAGTTGCCTACTGGATCGGACACACTCCGAAATACCAGCTGTCAC TCONS_00237679 . 5' 240 TCONS_00237679 . 5' 240 EMBV3_01775 AGATCTCAGCCTTTAAAACGTGTCTGCCTGGCTTCCCAGGGGCCCCGTGTGCCATTAAAA Gene GeneID:512908|HCFC1:XM_002707908:138_cdna Constitutive 0 NULL GeneID:512908 X GENE HCFC1 NULL host cell factor C1 (VP16-accessory protein) EMBV3_39212 CTTTGGTGTGCAGAAGATCAACCTGCACCAGGCCGGCCGCGAGTTCGAGCCGAAGGCGCA Gene GeneID:100301152|LOC100301152:XM_002683923:2_cdna Constitutive 0 NULL GeneID:100301152 Un GENE LOC100301152 NULL hypothetical LOC100301152 EMBV3_09589 GCACCGGTCAGATATTTAGCAAATTTTCCAGCGGGCTATGAAGGGGATTCCTTGGCAGGT Gene BVT0102_128974 + 1 EMBV3_22908 GK000023.2:43649505-44010441 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00179596 TCONS_00118448 TCONS_00056480 TCONS_00171161 TCONS_00221595 TCONS_00010615 TCONS_00098385 TCONS_00088693 TCONS_00090417 TCONS_00107397 TCONS_00154811 TCONS_00180380 TCONS_00140493 TCONS_00187740 TCONS_00099835 TCONS_00174545 TCONS_00199297 TCONS_00226267 TCONS_00029929 TCONS_00252175 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00073417 TCONS_00056222 TCONS_00000314 TCONS_00137851 TCONS_00136880 TCONS_00132257 TCONS_00222044 TCONS_00174540 TCONS_00169645 TCONS_00174543 TCONS_00226268 TCONS_00154809 TCONS_00117782 TCONS_00154810 TCONS_00171162 TCONS_00132044 TCONS_00150268 TCONS_00161883 TCONS_00174544 TCONS_00174546 TCONS_00110376 TCONS_00102425 TCONS_00238548 TCONS_00130398 TCONS_00154812 TCONS_00110362 38 XLOC_085141 XLOC_109368 XLOC_072614 XLOC_034283 XLOC_103753 XLOC_134909 XLOC_006166 XLOC_058631 XLOC_053479 XLOC_055198 XLOC_063307 XLOC_094549 XLOC_110148 XLOC_113785 XLOC_060078 XLOC_104638 XLOC_120950 XLOC_137960 XLOC_016184 XLOC_155116 XLOC_123974 XLOC_045182 XLOC_034025 XLOC_000088 XLOC_084060 XLOC_083091 XLOC_080738 XLOC_135353 XLOC_103408 XLOC_071948 XLOC_080693 XLOC_091840 XLOC_098768 XLOC_066280 XLOC_061863 XLOC_145215 XLOC_079107 XLOC_066266 Coding TCONS_00179596 XLOC_109368 Coding Coding - 3:99968921-99976242 - TSS134355 7321 2 TCONS_00179596_16 405 0.995082638983745 1 0 2.2899730733807e-05 2.87794733106343e-05 1.46660483268652e-06 6.61670287463767e-07 1.53646147036544e-06 6.28636240086872e-07 5.72528955562941e-06 1.21959670911563e-05 5.74881503638329e-06 0.000780002652451121 0.000524875399509416 0.000765542978596544 0.000139250951259028 0.000374871407518322 4.26007064693583e-05 0.00240846066750101 0.00195592431671475 0.00489058798563395 1.09503770484616e-05 4.87551939026511e-06 1.22570456212253e-06 0.0026724491859505 0.0033515583835469 0.00270820785064512 1.27136386568317e-06 4.52394845141639e-06 5.25248538403041e-06 0.00182989328022288 0.0018967866127545 0.0033944148952754 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2479 90.46 0.246414424258981 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 6e-08 66.2 69.48 0.0208987843190821 TCONS_00179596_12 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 2e-25 110 28.41 0.723287671232877 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACACATAAAAGGAAGAGCCAAAGCGCTCTCATGGACTCTCTCTCCTGCGTTCATGCGCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCTTAAGAGCTGTAGCATGGTTCCAAGACCCAAGAGCTGTGATGCGCTGAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACATACACTCGTGTGACATCTATGGTGCCGTGACTCGGGTTTAACCTGGCTGAAACAACCTTTGCGCAGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGCAAAACTCCCGCACTAGAAGTGGAAAGCGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACTGGGACAGTGAAAATAGAACTCAGCAGAAAGCTCACGTGGCCCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGTAAGAGGTCCTTGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCATTTCTTGTTTCCTCAAACCTCCCACAAACAGGCAGGCAGCAGGGGAACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGGTGGGGGTTCTTCTGTCCTTTATCCTGTGCCAAGGATCAGACCAATAAAATTATGAGGACCGGTCAGATATTTAGCAAATCTTCCAGTGGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCTGGCTAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAAATTTGTTAGGATCCAGAGAGAAGCCACCCTTCAGGGTGTGAACTGTTGGCAAGGTCAAGGGCTGGGGCCATGGAATTAGGCCGGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATAAGTGAGAGGACCATCCCAGCCATTGGGGAACCACCCACTCATCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTAGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACACTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCTCTTCCCTCCTGTTTCATGCTCTTTTCCTGATCCCCATCCAGACCCACAAGCCTGCCTCTACAATCTTCTGGAGAGACAACCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGGATGCCCAAACTCCAGTCCGGGGGGGTCCCAGGAGGTCATCACACCTTGACCTGCCTAGAGATCAGTCTTCGAAAGGTTGTCACACCTTAACCTGTTGGGGATCCTCTAGTCCGAGGGGTCCCATGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGCCATCACGCCTCGACCTGCCCGGGGATTTGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTACACCCTGACCCAGGGACACCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAAAAGATTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAACCTATTACTCGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCATTGCCTTTCTGGAGAGGTTAAAAGAGGCACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGATAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGACAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAAAAAGAGACAAGGCATGCTCAGATGCTGGCCGCCCTCCAGAAAAGCCCTATGGCAAACCCAGAGTCCTTGAAGGACAAGGCACAAGACAAATGCCTAATCTATAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGCAGCACTCTGCCCTGGGGACCCAAGAGCCTCAAGGTCAAGAGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGTGGCCTGCTCCAGCCAGCCCGCCAGTCACAGATAACCATCACGGGGCTGGAGCCAAGAGTGCACCTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTCCAGGAAAAGCAACTACTAAAAGATTGACCTGAGCACTTCTTTGTTGCTGGGATGGACAAATTTTCCCATCAGTTTCTGGTGGTCCCTGAGTGTCCTACTCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAATCCATTACACCTTCAATAGAGAGGGGCCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGCCCACCAAGCTGAACCAGTCATCATTATCCTCCGAGACCCTACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGGCTCAGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGTTTGTGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGAAAACAGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCTATCCCACAGTACCCAATCCCTACGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACTACTGGCTAAAGAATCCCAATATCGTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACACCAACAGATGACTTGGACGGTATTACTTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGAAAGGCCCTTAGCCAGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGTACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCAAAAACAATTGCGAGCTTTCCTGGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGATGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGTCTGTAGCTTACTTATTCAAGAGGCTCGATCCAACTTCCCAAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATTGGAGAGGCCATTTATGGATGTCTGATCAAAGAATTCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCAGGTATGCAGTAGTCTCCAATTTTGAGACCACAGAGGCTAGGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAACTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATATCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCAACTCTTGGAGGCAGTCCATCTGCCCACTGAGATTTTCAGTCTCCCACTGCAAAAGACACCAAAAAGGGAGCAGGGAAGTGACACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTAAGAGACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATATCGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCTTCCAAATATTACTAGAAAGGTCCTTCAGAGGAACAGGCGTCCAAACAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACATGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGACATATACATTCACAGGATGGATTGAAGGCTTTCCCACCCAGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCTAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGTATCGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAAGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGCATTGCCTCTGAGGAACAGGTTGGTCTTAGTCCTTATGATATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACACTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAGCCCACATGGAAGGGCCCCTACCCTGTAATACCTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGACACCTATTCAGAACTACCAGTGAGTGCCTTCTAATGAACACCCCCAAAATCTGGTTTCTGGGTATAAAATTTCTCAGGATAACCCTAAAGAGCCAACACAGCTTGACAGATACTGTACTCCAAAACAGAGAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCCATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATACAAAACTACAACTGACCACGGAAAATATCACACACCCTTGGACACTGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAAGGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGAAAGTAGCCAGAAAGACCTCGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATTTCTTGAGGGGGGAATATTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCAAGGACCAGAGTGAAGACTTCAGGTAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATTAAAAGGAAGAGCCAAAGTGCTTTCTCATGGACTCTCTCTCCTGCGTGTGTGCGCTCTTCCTCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATACAGCTGTAACACTGATTTACTTAAGAGCTGTAGCATGGTTTGTCCAAGACCCAAGAGCTGTGACGTGCCAAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGTAGGAAAGTAGGATACATGTTTTGAGTAAAAAAGGATTTTTATGCATGGCTGGGCTGAGATTAGGTTAAACTTATTCAGGTAAATGGATTTTGTTATTAAAAGTAGACTGGTGCAGGACTAGATTTGGTTCCTCTATTCTAAGAGAACATGTTTACTTAGAATGCTGCTTTTGATAAGATTGTATGAACTTGCCTTTAAGTGATCTGTATTTGTTTTTAAATAGTCACAGTGACCTATGATTCTATCTGACCAAATATTTTTAAAACTTTTTGATATTTTTTATGCACTTCCTATCAAATTCTAATTAAAGTTCTTTTGACTTCAGCTAGCTTGGAGATGCTTCAGAGGGCCCTTCAGAAAAAAATTTAATATAATTTAAAACTACATATATTCATATTAAACTGGCTAGAATTGGTTGATATGTTAAATTACACAGAAGTCAGTGAATGATCAGCCTCCTCAGATTATATGTTATGAATAAATTTTATTAATACAGACATTCTAGAAACTA TCONS_00174208 . 5' 11514 TCONS_00174208 . 5' 11514 EMBV3_35521 CAGAGCTAGGTTTATATTCAGAGCCTGTGTGTTCTTTGCACCCTGTCAGCCTTGAGGTTA Gene BVV0102_121181 + 0 NULL GK000004.2:15227666-15330904 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25862 GGCCCTAGCCAGGCCCCAAGATGTGTGCATGGAGACAAGGCCAGATTTTTCTGTCATTTA Gene GeneID:511736|RABEP2:NM_001083408:293_cdna Constitutive 0 NULL GeneID:511736 25 GENE RABEP2 MGC140362 rabaptin, RAB GTPase binding effector protein 2 EMBV3_10267 AGTCCACAAAAAGAACACGGGAGAAGAAAGCCTTAGGTGTCAATTCCAAAACAGTGATTG Gene BVT0102_126519 + 0 NULL GK000002.2:24908362-24956080 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104762 1 XLOC_062451 Coding TCONS_00104762 XLOC_062451 Coding Coding CYBRD1 2:24953080-24989959 = TSS77502 6361 1 TCONS_00104762_6 285 0.154849866373212 4 0.827620803731222 0.00420517509112178 0.00518996001596314 0.00299879371810901 0.00220970634982645 0.00226480434221292 0.0010906088436415 0.00225591899362884 0.00287018674465088 0.00463980804890268 0.000447945516611424 0.000106762645078351 3.56731920235181e-05 0.000387675309350066 0.000735546624934765 0.00116321207021207 0.000119362678735082 0.000341912037736558 5.6796141061689e-06 0.00258671747245366 0.00335997719743354 0.00195458378119308 1.84117362990823e-05 4.11738906211229e-05 0.000248350256820735 0.00337746532334124 0.00264370113001001 0.00205384519262253 2.18311924695094e-05 1.82884204988992e-05 6.83654011706443e-06 XM_005202340.1 CYBRD1 PREDICTED: Bos taurus cytochrome b reductase 1 (CYBRD1), transcript 0.0 7429 100.00 0.647382487030341 NM_024843.3 CYBRD1 Homo sapiens cytochrome b reductase 1 (CYBRD1), transcript variant 0.0 1627 77.45 0.319761043861028 TCONS_00104762_6 sp|Q53TN4|CYBR1_HUMAN CYBR1_HUMAN Cytochrome b reductase 1; 1e-167 471 81.82 0.996491228070175 1 coding 0 0 0 0 0.0122310122315148 0.926370453311936 0.00606387638641063 0.90616980101974 GTGTGTGTGTGTGTGTGTCTTTTCTGTCTTTGTCTCTCTCTTTCTCTCTCTGGATTTCAGACCTCTCCCATTCAGGTCTGGGCACTGCAAACCCCTTGTGGTTTCCCACACCCTGCCCACAACTTTGTAAATAGCCCTGTTCATTATTAAATTGCCCAACTGGAATGAGCCGTTTTCTTCCTGCCAGCACCCTGACTGACACAGTCAGTCCCATTCTTCTCCCAACATTTACTGTGTAGCTACTATATGTCAAGAGTGTGTTCGTCGCTCAGTCGTGTCTAACTCTTTGTGACCCCAAGGACTATAGCCCGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAATGGGTTGCCATTTCCTTCTCCCACTTTATGTCAATGAAGGATAAAATGATAAAGTAGACAGTGAGTACTCTCAAGGGGGCTGTCTGGGGAGTGGAGACAGCCACAGGAATAGATCGGTATATCACACCTTGGTGAGTGATGCAGAGAAGCACTGGATGGGGAGGTGGTTGTGTGCATGCATGCTAAGTCACTTTAGTCCAACTCTTTGCGATGCTATGGAATGTAGCCCTCCAGACTCCTCTGTCCATGTATAAGATAGGGGTGTAAGCAGACACAGGTAAGGTTTCTCGGTGGAAATGGTGTTGGGCAATTTTAGAGGCAGGGACATGCGTAGGAAGTGGTCAGGAACTGGGAGAGAAGCCATGGACAACAGGGCCAGACCATAGAGAGCCTTACACTGTGGGTGTTGTTAAGTCACATCTGACTCTTTCATGACTCCATGGACTACAGCCCACCAGGCTCCTCTGTCCATGGGGTTTTCCAGGCAAGAATATTGGAATGGGTTGCCACGTCCTTCTCCAGGGGATGTTCCACACCCAGGGATCAAACCTGCGTCTCCTGCATTGGCTGGCAGATTCTTACCACTGAGCCACGGGTGAAGCCCCATACTGTGGTTAGGGGTCCTTTTTTTCCCATTTGTTTACTCTCTTTTTCTTCCTTTCTTTTTACCATCAATGGAAAACTAGTGACAGCAGTGAAGTCTGTAGCCTCTAACTCTTAGACCTTAATCTTGGACCACTACCAGTACGTGACACTCCTACTTCCTTGCCTAAAACCTGTCTTTTCCATCGAAAATCACGCCCATATACCTCCTACACATTCTAAGGGCTTTCACAATGGCAACAAGACAATATGGTAAACAATTAATTCTTTGGAGATGAGCCACAGGAGGAGCTAGAAGTTAAGGTTCCCAAATGCATTCTGGGAGACCTTGCAGCCACAGCCCTGCCTTCTTCAACAGGAATGATAATTCTGTCGCTTTTCTTGTCCAGTGGAGAAGGGTGAACTGAGTGTTGGAAAGAGGGCAGGGAGTGAGTAAGCTCAGGCCACCAAGATGAGGCTTTCGTCCAAATACGTTTGAACAGGTGGCACTTTTAAGATGCATTTTTATCACATATGGGGAAGTCGAGAGTCCAAGAGGTGTCTGCTTTCTCTGTTAGGTGCTCACTGCCAGTAGTTTTCTTGCTAGATGAGACCAGGTACACACTGTCTCACAGGTTCCTCCTTGGCATCAAAGACAGCCAGTCCTCTAGGTCTGCAGCTTAGGAGGCTTCGTAAGTCAAAATCACACACACAAAGCCACCCGACGGACCCCTCTCTTCTGTTAACCGATTGTGCACACCACTGCCTTACTCAGCCTCCTCTCAGAGAAGGAAGAGACACGGGAAAAGTTAAAGTGGTGGGTGTGGAAACTTCTGGACTCTTGCTCTCAACAACTAACCAGATCGGTTACTCGAGCTCTCGGCAAGCGCAGACACCGACCACGAGATCCCCAGGGTGGGGCTAGTTTCTGAGCTAAGGGCCAGCTGCCCCCGCCCCGAGGCCCCGCATCCCAGGCAGGCCCGCGACAAAGCCCCTCCCCGGGGCGGAGACAGCTCCTAAAAGTCGACGCCGCGTCCCGCCGCAGGCCAGTACCCAGGGGCCGCCGCCTCGCCGAGTTCCTTCGCCGCCACCGCGCGGAGTATGGGGCGTTGATGGCCATGGAGGGCTACAGGGGCTTCTTGGCGCTGCTGGTGTCGGCGCTGCTGGTCGGCTTCCTGTCTGTGATCTTCACCCTCATCTGGGTCCTCCACCACCGAGAGGGGCTCGGCTGGGACGGGACCGCGCTCGAGTTTAACTGGCACCCGGTGCTCGTGGTCACCGGCTTCGTCTTCATCCTGGGCATCGCCATCATTGTATACAGACTGCCATGGACCTGGAAATGCAGCAAGCTCCTGATGAAATCCATCCATGCAGGGCTAAACACTGTTGCTGCCATTCTTGCAATTATTTCTCTGGTGGCTGTTTTTGATTTCCACAATGCCAAGAAGATCCCCAATATGTACAGTCTGCACAGCTGGGTTGGACTGACAGCTGTCATTCTTTACATCTTACAGCTTCTCCTAGGTTTTTTTGTCTTTCTGCTTCCTTGGGCTCCACTTTCTCTCCGAGCACTTCTCATGCCCATACACGTCTATTCCGGACTTTTCATCTTTGGAACAGTGATTGCAACTGTACTTATGGGATTGACTGAGAAACTGATTTTTGCCCTGAAAAATCCTTCATACAGTTCATTGCCACCAGAAGGTATTTTCACAAACACCCTTGGCCTTCTGATTCTGGTGTTTGGGGCTCTCATTTTTTGGATAGTCACCAGACCACAATGGAAACGTCCTAAAGAACCAAATTCTGTCCTTCTTCAGCCAAACGGAGGTGCTCCAGAGGGAGTGGAAAGTTCCATGGCAATGAACTTTGGCAACGTGGACAAATCAGATTCAGAGTTAAACAGTGAAGCAGCAGCAAGGAAAAGAAACATCACCCTTGATGAGGCTGGACAGAGATCCACCATGTAAAATGGGGTAGCAATGTAGCCATATAACTCCAGTGTAAAAAACTAGCTCTCCAGTTTAGCTTCTCCTACTTACCCGTGAGATGATTGAGGTCCACAGAGTCAATATTTATTCTAATCAAAAAATAGGATGTCTTGAAAGTGTTTATATTGATTGAGGCTTATAAACTTACCCAAGTTGAGAGGGAGATGATCAGTGTAAATATTAATAACAGTAGATATAAATTGTGCTTATATTACCTTTTTCTCGTTGAGGACCAAAGCATTTAGCAGAGTGCCTTGCATAGAACAAATGATCAAAATGTGTCTACAGTTGGTAAATCTGATAAACTGGCAGTTTCCCTGGCCTCTTATCATGTAGTCATTTTCTGTGTATTCTGGGAATCCAGTTATAAAGTTTTGGAATCAGATCATGACTATCTGGGACAGAGTTAATGCTCCACAGGTATCATGACTAGAGCCCAGAAAAAAATGTAGGAAAGGAACTGGCTCCCTTTTCCCTGTACCTGCCCTTTGCTCCCTCCCCGGCTGGTTTGTCCTTAGATTGGCCTTGGAGAGCAGGATTTATTTTAGGGCACTTTGGAGCAGTGACAAGACTGTAGGTAGCTGAAGGTCTCCTCTGGTCAGACCAGAAGTTTTTCCAAGTTGACTTAATCCCAAGGCTTCCTTGGGTTTGATGTACTTTATGATCCAGATTCCAAACCTAATTATGATGAGAATATACCTGAATACATAAGCAGTATAAACTGCTCTACAAACCTTAAAGAACACTTTCTCCCAAGTTTCTGGTGTTTTTAAACATGGAACTTACTAAGTGCCAGTACTATCCTAAGCACTTTATAAATCTTAGCTCATTCAATCCCCAGATATAACTTTTGCAGTAGGCACCATTAAAATCTTCATTTTACAGATGAGATATCTGAGAGAGGTTAGTAGCCTGCCTGAAGGTCACACAGCTAATGAGTAGTGAAACTGAGACTCCAAAACTGGCATTTTGGCACCTCAGGTCAGTCCATGATTCACCATATTGTTGTCTTCATGCATGCATCCTAAGTTGCTCAGTCGTGTCTCTGCGACCCCAAGTCCCTGCCTGGCTTCTCTGTCCATGGGGTTCTCCAGACAAGAATCCTGGAGTGGGTTGCCATTTCTTTCTCCAGGGGATCTTCCCAACCCAGGGAGCAAACCCAGATCTTCTGCATTACAGGTGGATTCTTTACTCTCTGAGCCACTAGGGAAGCCCTTGCTAATTTACACCTGCTTTGACCCACCCTTGGATAAACCTCATTTGGTGGGATACAGTAGAGTTTTTAAAATTTACCTTCTGGCTCCATTTACAAGGCAGATTCCTCAAATAAACAAGGAAAAGGGCCTACCCTTACCTGGAGATTCACCATGGGCACCCTGCCACTGCCAACAAGCCATGGCTTACCTTGATGCTCCTTTGATCTTAAAATTGTGTCTTGGTAATAAAGAGAGGTTTAGGCAAGAACATCTATAGCTTTCAAAGTTCATCAATTATCAATTCGGTTCTTCAGAATCTTAGCTGCTAAACAGCTTTGGGTTTGGAGGTAGGAGAGATGAACTTCATGGTCTGCCCTTCCCAGGGAGCAAGAGCTAGGGTCCTTCCTGATTTGGATGGAATTCTCGGGGCTATCTTGTGTTTTGGGTTCTCAGTAGTGAATTAAGACTCAGAGATGATAGTTTTCATGCATGAGATCTCTGTATAGACTCTGGCCTGGTAAAACCTAGAGTGGTGCCTATGCTGAAACAATGTATTTTTATCTGAGGGTTAATTTTTGGTTTCCCTGCAATTTTAAACTGTTTCTACCAAATAAACTTAACGTTTTTGGTGTTTAGCGAATTTCCTTTTAGGGTAACTGGTTATTATGCCCATAGACTGAGTACAAGCTACTCTTCATCACATCCCTGAAATTTGATGATAATCATTTGAGTCACTCGCCAAAACACTGTTGTCTTCTTCATTCTGTTTCCAAAATTTTGGCAATAGTCATAGGGATCCCCAGTGCCCAGCCTAGTGCCTGGCATATATGTATGCAATATGCACATAAATTCAGTAGAAGTAGAGCCTGCTGCAATTTGGGTCCTAAGTGGAAGGAGGAATTGAATTGTCACACAGAAACATATTTTGGTAAATGGATGTTTCATTACATAGAGGTGCACAAAATTCCAGGTATTTTGGGGGGCAAGGGGTTAATGACCACCCCAAGAATTGAAGCTGCCATTCCATTTCCTACAGTTCAGGAAAGAGATTATCAATGAAAAGTTAATTATGGGTTTGGCACTAGGCTGTGCTGCCCCATTGAGAAGTATTGGAGCACTCCTCATCTTAGCCCTTTATTTTATCCCTCTTGTGGGTTAATGTGAGGTTCATCTTACAGATATTATAAGAACTTCTTTTCTTTCTTTCTCAACCTTTGTGAAAACAATGCATAGTAAAATATATCTAGAAACCTTTCTGTTTGAGATTCTCTTAATGGACCTTTTATTCTAATGATAATTATACCTTTATCTTTCAAAAGCTGGTATTTCCTACCTAAAGCATCTCCCCCCAAAATATCTCATTAAAAAGTCCACAAAAAGAACACGGGAGAAGAAAGCCTTAGGTGTCAATTCCAAAACAGTGATTGAAATCTTCCCAAATAATTATAGCTTATATCATCTACAGAGATAGTCTGGCTTGCCTTACCCCATAATATAATTTCAGGAAAAAAAGCTATATTTTAACACGCATCTAAATCAACACTAAAGCCTTTTGTCTCGAAGGGTTTATTGAGAAACTCAGATGATTATACTTTTTAAATTAATGTTATCAAAACTGTACAAATTCCTGTGCTCATTGTGTCAAACTGAATCCACCCTCCAAAGTACCTTCCTCCCTTTCTTCTCCTGGTTTCATTTAAGCTGTGCGGGTTAGAAACAGTATCTCAGACCTTATGATCAAATGACAAAGGAGATAATCGCACTTTTTCAGGAATACTGACAAGTGATTTTTGTTTCTAAAGGACAAAATAAAGAGGATGTCTTGCTTTTAATTAGGCTCTTTCCCTGCTGAGTTGGAAATTCCAGTGCAAAACTGATAGACCGCAACTGCCAAATTTGAAAGCCTGAAGTAAAGCTTTTTGCTAATTTTATTGCAGCAAGATGGAATTTTTATCTTTGTATGTCCTTTTTTAGATAACTCTGACAGAAAACTGTTACTGCTATGTCTTCGAGCTACACATAGGAAAGTATAGAAGAATGAAAACTTCTTTATCCTCTACAAAGTACCTGAAAACTTTAAGTGGGAAAGATTCCTCTGTTTAAAATCTACCTTTTTAATCTCAATACATTTATGCAAAAATGTTAAATAGCTTGAATATTTTGTAATTTTGTAGAAAAAATATGCATCTATTTTTTTCTTGTTTTTATATAGTAATAAAAGTTATTTTGGAAGCTA EMBV3_02331 GAATGAAGCTCTTTACGCCAGCCTCTGTTTCCAGCCTGTGAGGTACTGTGAAGAACATTC Gene GeneID:525106|C5H22orf28:NM_001015631:34_cdna Constitutive 2 NULL GeneID:525106 5 GENE C5H22orf28 C22orf28 HSPC117 MGC128918 chromosome 22 open reading frame 28 ortholog EMBV3_23465 CATCATGACTCGGAGGCTCTGTGGAACACTGGTATCTCTCTGCTGGCTCATTGGATTCCT Gene GeneID:100140619|LOC100140619:XM_002690661:221_cdna Constitutive 0 NULL GeneID:100140619 10 GENE LOC100140619 NULL similar to Olfactory receptor 11H4 (Olfactory receptor OR14-36) EMBV3_14644 TGAGTCCTTTGGGGACTTGTCCACTGCTGATGCTGTTATGAACAACCCTAAGGTGAAGGC Gene GeneID:280813|HBB:NM_173917:341_cdna Constitutive 0 NULL GeneID:280813 15 GENE HBB NULL hemoglobin, beta EMBV3_39832 CGTGACTCGGGTCTGTCGGAGCAAGGTGATTCGCCAAGATGACCAACACAAAGGGAAAGA Gene GeneID:326584|RPL21:XM_002691838:99_cdna UTR3_Alt 2 NULL GeneID:326584 12 GENE RPL21 RPL21P16 ribosomal protein L21 EMBV3_17642 TCACCGGCTGGGGCAAGACCCGGTACAACGGGCGACTCAGGTGGCCCCCTGGTCTGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24751 CCCGGCCCCTCTCCCGTTTCCAGAGCCGTGTGGGGTGCTGAGGCTTGGGCAGCATGACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07178 CTAGCAAACTGGACAGACTTGTGTGTGGCCCCTTCCTCTCTGGTACTTTGCCTGCTGTAT Gene GeneID:531776|LOC531776:XM_002697817:455_cdna Constitutive 0 NULL GeneID:531776 24 GENE LOC531776 NULL similar to Ladybird homeobox corepressor 1 (LBX1 corepressor 1) EMBV3_26126 GCTTTGCCAAGTGCTTTGAGATTTCGGATGCGGATCAAGAACAATGAATACAGTATTCCC Variant GeneID:538238|PLK1:NM_001038173:371_cdna 286^851 2 EMBV3_42798 GeneID:538238 25 GENE PLK1 MGC133927 polo-like kinase 1 (Drosophila) EMBV3_05247 CTTACCTGCCAGCGTCGGGTCAAGCACAAGCCACAGCCTCCCATGATGGTCAAGACTGAT Gene GeneID:532553|GRIK3:XM_002686470:519_cdna Constitutive 0 NULL GeneID:532553 3 GENE GRIK3 NULL glutamate receptor, ionotropic, kainate 3 EMBV3_02743 TGAACTGTATCAGGTTCCAGTCGTTGGTGTGACAGTGCCCATCATGTGGTTCTACCTCCT Gene GeneID:613784|SLC35B4:XM_002686963:41_cdna Constitutive 0 NULL GeneID:613784 4 GENE SLC35B4 NULL solute carrier family 35, member B4 EMBV3_19121 GAACATCAGGACCAAGAGCCTGTTTTCCAAGGCAGTGACTCCAGTGGTTATCAAAGTGAC Gene GeneID:512375|TWISTNB:NM_001105622:23_cdna Constitutive 2 NULL GeneID:512375 4 GENE TWISTNB MGC140293 TWIST neighbor EMBV3_01552 TGGTCAACAACGCGGGCATCGCCTTCAAGAGCAGAGTGGTGAACGTCAGTAGTTCACAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32945 GCCAGGACACCTGTAGAATGTTCCACCTCCAGCCAGTTAAAGGTTGTTGCCATGTTTCCT Gene GeneID:615110|ACER3:NM_001102285:59_cdna UTR3_Alt 2 NULL GeneID:615110 15 GENE ACER3 MGC179542 PHCA alkaline ceramidase 3 EMBV3_29610 ATGGAAGCTCCTATCGTAGTACAGTAGTTCCTACACAAATGCCCTAATGTTCTACTTATC Gene BVV0101_010914 + 0 NULL GK000007.2:43157306-43187984 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26345 ACCCGGAGTCGAGCGAACGATTCACACAGCTTGATTCCTGAACCCATGTCCTGGTTGTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32305 TCTTTGGATTGATGGGCAAACGGGATGCTGGACATGGCCAGCTTTCTCACAAAAGGCATA Variant GeneID:281512|TAC1:NM_174193:9_cdna 363^407 2 EMBV3_35973 GeneID:281512 4 GENE TAC1 TAC tachykinin, precursor 1 EMBV3_14247 TGGGGGAGAGTTGTAATAAATGACTGATGTCGATAGGAATTCAAGGAAGGCTGGAGCAGG Gene GeneID:509009|SLC35E3:NM_001083654:28_cdna UTR3_Alt 2 NULL GeneID:509009 5 GENE SLC35E3 MGC151827 solute carrier family 35, member E3 EMBV3_05303 CACTTTTCCCTTTTTCAGTTGGCCTTAGGTGTGTGTCAGTGTGGCATGCAGAAAGTTATG Gene GeneID:528946|PCGF5:NM_001077980:33_cdna UTR3_Alt 2 NULL GeneID:528946 26 GENE PCGF5 MGC142374 polycomb group ring finger 5 EMBV3_18323 TCAGTTTGGATGACTTCCAGCTCCAGCCACCTGTAACCTTCCGCCTGAAGTCAGGTTCTG Gene GeneID:504950|NPM3:XM_002698445:437_cdna Constitutive 0 NULL GeneID:504950 26 GENE NPM3 NULL nucleophosmin/nucleoplasmin 3 EMBV3_07886 GCCGCACTTCACCACCTCTGCTGCACAGAACAACTTCAGACTGATGGAGAATGTTAGCAA Gene GeneID:532067|COBLL1:XM_002685374:289_cdna Constitutive 2 NULL GeneID:532067 2 GENE COBLL1 NULL COBL-like 1 EMBV3_12003 GCACTGGAAAGCGTCAGCCAGTGGAGATGACAGCCATTTCGATTATGTCCATGACCAGAA Gene GeneID:100299445|LOC100299445:XM_002688994:76_cdna Constitutive 0 NULL GeneID:100299445 7 GENE LOC100299445 NULL similar to Protein Tyrosine Phosphatase family member (ptp-1) EMBV3_40639 TGTTGGCAAGAAATGTGCTGCTGATCTGGGCCTGAAGAAGGGCTATCGAATGGTGGTGAA Gene GeneID:782238|HINT1:XM_002700348:6_cdna Constitutive 0 NULL GeneID:782238 X GENE HINT1 NULL histidine triad nucleotide binding protein 1 EMBV3_37007 AGATGGATCTGATGAAATGGATTGTCCTATCAGCCCCCTTCCCCAGCTCTGTGGTCAAAC Gene GeneID:524240|LOC524240:XR_083826:29_cdna Constitutive 0 NULL GeneID:524240 13 PSEUDO LOC524240 NULL similar to hCG2042429 EMBV3_20351 GTAGATGGGACCTTCCACAAATATGTCTTCACTCCTGATGGAAACTGCAACCGAGAGGCT Gene GeneID:539190|WDR45:NM_001076151:99_cdna Constitutive 2 NULL GeneID:539190 X GENE WDR45 MGC139750 WD repeat domain 45 EMBV3_42106 GTATTGAGGATTTTGGCCCTACTTCAATAAATTTGACATCGCAGAAGCAGGATAACTTCC Gene BVT0102_362590 + 0 NULL GK000006.2:72760815-72890967 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35060 CAGCTTCCTTCTGTTTAAGAACCATACCTGTCGTGTGCTCCACAAGGCTCTGTCCACATG Gene GeneID:512579|LOC512579:XM_002697412:109_cdna Constitutive 0 NULL GeneID:512579 23 GENE LOC512579 NULL similar to olfactory receptor, family 12, subfamily D, member 3 EMBV3_01068 ACATCCCCTCGAAGCAGTGGCTTGACTCGCTGTGTTGTTTCCTCAACTGTAGACCAAGGG Gene GeneID:513834|KIAA0141:NM_001024535:229_cdna Constitutive 0 NULL GeneID:513834 7 GENE KIAA0141 MGC139304 KIAA0141 protein EMBV3_01289 ATCCACACCTGGACCGCACCCTCAAGTATCAACAGCTCGATGCTCTCCTGCTTCTTCAAC Gene GeneID:100337213|LOC100337213:XM_002688692:150_cdna Constitutive 0 NULL GeneID:100337213 7 GENE LOC100337213 NULL egf-like module containing, mucin-like, hormone receptor-like 2-like EMBV3_13454 ACCACGGTTCACCATTGTACCCTCAATTTGATCCAACAGAATTACACAACCGAGGGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00374 TGGGTGAAACATATATACGCAGGGTTCGAATGAGGCCAGGGGTTGCCTGTTCAGTATCTC Gene GeneID:507784|LOC507784:XM_002684826:148_cdna Constitutive 0 NULL GeneID:507784 1 GENE LOC507784 NULL similar to 60S ribosomal protein L9 EMBV3_38812 TTGGACTATGACACTGACGTCTCTCTTGAGAAGATCCAGCCCATCACACAAAACGGGCAG Gene GeneID:281125|DRD1:NM_174042:204_cdna Constitutive 0 NULL GeneID:281125 10 GENE DRD1 NULL dopamine receptor D1 EMBV3_22979 AATCAAGAAGGACGGAAAGGAAGGCACTGAGGAAATAGACAGACATGCTGAGCGCAGACG Gene GeneID:100299693|LOC100299693:XM_002686159:299_cdna UTR3_Alt 2 NULL GeneID:100299693 3 GENE LOC100299693 NULL hypothetical protein LOC100299693 EMBV3_20769 AGAAACAGCACTGGCTGAAACTTGCTTCTTTGGAAACAAACCAGGCCCCATTCCAGGAGG Gene BVT0102_080599 + 0 NULL GK000010.2:47321146-47955994 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013825 1 XLOC_008205 NonCoding TCONS_00013825 XLOC_008205 NonCoding NonCoding - 10:47936919-47943666 - TSS10168 1794 1 TCONS_00013825_1 73 3 0.734509338867477 0.00334453768612195 0.00209482966641399 0.00123283541780908 0.00219407860089177 0.00142418573066105 0.000303072903881825 0.00181875560009214 0.00239028488372881 0.000655311432926926 7.56846796830599e-05 1.59502879487295e-05 2.98970289797818e-05 0.000179130170026056 2.09765568670951e-05 0.000443034811365513 0 0 0 0.000647541354602933 0.000629350332217091 0.000331662662802831 0 0 0 0.00106785045707743 0.00264695835394391 0.00392896285735307 0 0 0 XR_226891.1 LOC101902325 PREDICTED: Bos taurus uncharacterized LOC101902325 (LOC101902325), 0.0 1472 100.00 0.454292084726867 XR_248114.1 LOC255177 PREDICTED: Homo sapiens uncharacterized LOC255177 (LOC255177), 2e-51 208 70.66 0.247491638795987 0 noncoding 0 0 0 0 -2.47417464701891 0.083876675716057 -0.0777481591918533 0.269352065689554 ATAGAATCTGTTACCTTATTTGTGAAGTGTAAGAGATTGGACCTTAAAGATTTTCAAGGTTGAATTCTAGGTTGAATTCTCTAGGAAAGTGAGACCAAAGTTTGACTTTGATGGAACCCTACTGAGGACGAAATGAAACAGGCTCTGTGAAAGAGGAAAGAGAGGGAGTGTCCGAGTGAGCATCCCGGAAGCCAACCCTCCATAAAAGTGGAAACGCGGGCCTGCTGAGGTGAAGAGCCACAGTACTCCGGGCAGTAAAAGAGCTGGGGTCTACTTAAGATAAAAGACTCTGATGCACCAGAGGCTTAGCCTTCACCTTTCTCCATGGGACTAACTTGCCAGAACAAGCTGTTCCTCAACAAGAGAACACATCATCTCCCAGAACTTTCAAAACTTCTTCCAGTTCTCACAGGAGCAAATGCCTGGAGTTTTCCCACTTTCCACGTCAGGAGGTTTACCTACTTTCAGAACATGCTGCTCTACAGACATCTGAAGCTACAAACATTGGAATACCTGGCTCCTAAGTTTAGAAACAGCACTGGCTGAAACTTGCTTCTTTGGAAACAAACCAGGCCCCATTCCAGGAGGATTTTCACGTGGAAGGTGAATGGACACCAACCAGAGACTAGAGACATTGAGAACAGGGACCCCCTGTGTTGCTCCATCTCCTGAGTGAGAGGGCAAGTGTGCTTTTAAGCGTGGGATATTTGAATTCTTCTGTGTGAGGTTTCTTTGAAACTCTGCATTTCCACTCACGAAACAAATGGTGCCATAGGATGCCTGGCACTAAGGCATATAAACGATTTACTGAAACCTTGACATTTGTGCTATCTCACAACATGTGTACTTCAAGGCGATACTAGAGCATTGTAATAAAGTGGACTTTTGATGACATATGATCTGACAAAGCGTTTATTTGTGTGAAATATCTTTCAAAGATGACACAAATTAAGTAATATGTAGTACTATATATGTTTTAGATAAGGGTTTCTTCATACTACTTATATACAAAAATGTCATACAACTTGAAGCCCTCACTTGCAAAGGACAGCAATAAGTGTCATGTATTAGCCATTGGAGGGCTCTTCACTATTTAGACTGTACCAAGGCCCAAAGTCTTAACTCTGAGAAAATATTCAAGGGAATGTGGGGAGCTTTTGTTTTTTAGTCCATTGGTTCACTCTGAAGATGCCTAAACTCCACTGACCCTGGGCTGGGCTGGCTGCAGTGAACTTAGCACTGCTACTCTCAAAAGCTATGTCCACGGTATACAGCTTCCCATGGGGCCATTATGTTTTCTCCCTTCCAAGATGCCTCTGTCTCAGGGATGCTGAATGTGAGTAGAGTGATAATATTATTATATTAGCTACCATCCAAACTGGAAAGCCCAGCTACCTCAGTGGATCCAGAATCCATCTTTTCTTCAAGTTGGGCAGTTCATCCTGAGAGCTTTGTTGGGTCTCTGTCTCTAGTCAAACAAAGTGGTGACGAAAGGGGTTATTCAAGCTGGTTTATCTGCACTTGGCTTGAAACATGCACACGGTATCATTCCAACTGTGAACCAGAAAATATGACTCAAGACAAATGTCAGACTGTACTTAAGTATAGAGAGACTTTTAATTTTTAACAAGGCACTCCAGTCATCTCTCTTAAAAAAGACCCCCTTCACAGCACACAGAACTTTAAAAGAAGGCACAGGGACATGGCAGATTATGCTAACAGTATTTGAATAAAATGTATTTAAGGGAAATACTAATTGCAGAGAATGTCTGGCATTTTAAGAGAAAAAATTGC TCONS_00013826 s 5' 12329 TCONS_00013826 s 5' 19075 EMBV3_11006 TGGACAGAAGTTAGGTGTACATCCCTCCAGCTGCCATGGTTGGATTATTGGTGAACATGG Gene GeneID:537256|LDHC:NM_001046422:34_cdna Constitutive 0 NULL GeneID:537256 29 GENE LDHC MGC127715 lactate dehydrogenase C EMBV3_43753 TATATACTGCTGACTGGAGCGCTGCAATTCGTTTGTCTGAGAATACAGATCAACCCACAA Variant GeneID:614538|DAD1:NM_001034761:269_cdna 192^275 1 EMBV3_04669 GeneID:614538 10 GENE DAD1 MGC127140 defender against cell death 1 EMBV3_15571 CGGAGGCGCTGGATCGACTGGGAGGGCCCGGGTGGGTTTTGCAGTTGGTTTTCAATAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01214 GAATGTGGCTTTGGGACGAAGTCCTCTGAATGACAATAGTTGCCCCAGTTACCCGTTTCC Gene GeneID:317779|GCM1:XM_002697286:76_cdna Constitutive 0 NULL GeneID:317779 23 GENE GCM1 NULL glial cells missing homolog 1 (Drosophila) EMBV3_21410 GCAGAGGAGAAGCAAACCCCGGTGGAGTCATAAATGAAGGCTTTGAAGATGAAGATGGTC Gene GeneID:100336768|LOC100336768:XR_083752:46_cdna Constitutive 0 NULL GeneID:100336768 9 PSEUDO LOC100336768 NULL v-ros UR2 sarcoma virus oncogene homolog 1 (avian)-like EMBV3_00588 TTGGGAGAGTTGTGATGTGGTTTGTGGTGGAACGCGATCTAAGGAGGAAATGTAACGCCG Gene BVV0102_156697 + 1 EMBV3_31856 GK000002.2:132058682-132097561 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11351 TCTCCCTCCCCACCCCCTCGGGACAGTGTTACAGTAAACATTTAGCATTCTGTTTTGGGT Gene BVV0101_056676 + 0 NULL GK000019.2:28672343-28680826 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096239 TCONS_00096242 TCONS_00096236 TCONS_00096240 TCONS_00096241 TCONS_00096238 TCONS_00096237 1 XLOC_057921 Coding TCONS_00096237 XLOC_057921 Coding Coding MYH10 19:28679094-28767895 j TSS71555 7700 1 TCONS_00096237_11 1805 38 0.913716216216216 0.00901198840912366 0.00325072505710817 0.00564769117584426 0.0034038814292012 0.00286318446644972 0.00100080119785857 0.00257126482333388 0.00390044266325754 0.00277660139460655 0.000348226467641771 8.98645620552742e-10 1.68779153886208e-08 7.6199200235663e-05 0.000251998599331817 0.000290170669437415 4.87661490923078e-07 3.51705706328769e-19 4.80633741855827e-09 0.00580584343184988 0.00807458473930629 0.0022634583450755 7.79423533155258e-06 5.77711901421147e-05 8.54666645485768e-12 0.010635412992541 0.00978582592024532 0.0059286959170977 9.43326493215449e-08 1.02515339294631e-05 2.66909120538027e-07 XM_005220300.1 MYH10 PREDICTED: Bos taurus myosin, heavy chain 10, non-muscle (MYH10), 0.0 1.232e+04 99.56 0.891168831168831 NM_005964.3 MYH10 Homo sapiens myosin, heavy chain 10, non-muscle (MYH10), transcript 0.0 8857 88.11 0.902207792207792 TCONS_00096237_11 sp|Q27991|MYH10_BOVIN MYH10_BOVIN Myosin-10; 0.0 3595 100.00 0.99612188365651 0 coding 1 1 1 1 0.284137765510169 0.224652186004111 -0.0257875346026779 0.703437836909529 GTGGGGAGGTGCTCGTGGAAGTGGGCATGTCTAAGTGGGGCTTAGGTTGCGAGACAGGCCTGAGAAAGAGGAGCTCGGAGAGGGTGGAGTTGTGTGGATTTCAGAGGATTTCAGAGACTCGGGAAGGAGGAGGAACAGGTTCAGGGCAAAGGGGGAGGAGTTTGGTAGAGGACATTGACTTTGAGCTGCCTGAGGCGCTCCTGGGGGAGCCGTCTCTAGGTTATTCGACGTGGAGTCGGAGCTGTGCCTGGAATGCAGAGCTGGCAGCCTAGATGACGGAAGCCATGCGGGGCGAATCAGGTGCCGGGAAGACAGAAAACACTAAGAAAGTCATTCAGTACCTTGCTCATGTTGCTTCTTCACACAAAGGACGAAAGGACCATAATATTCCTGGGGAACTTGAACGGCAGCTTTTGCAAGCAAATCCAATCCTGGAATCATTTGGAAACGCAAAGACTGTGAAAAATGATAACTCATCTCGTTTTGGCAAGTTTATTCGGATCAACTTTGATGTAACTGGCTATATCGTTGGGGCCAACATTGAAACATACCTTCTGGAAAAATCTCGTGCTGTTCGTCAAGCAAAAGATGAGCGTACTTTTCATATCTTTTACCAATTGTTATCTGGAGCAGGAGAACATCTGAAGTCTGATTTGCTCCTTGAAGGATTTAATAACTACAGATTTCTCTCCAATGGCTATATTCCTATTCCGGGACAACAAGACAAAGATAACTTCCAGGAGACAATGGAGGCAATGCATATAATGGGCTTCTCCCATGAAGAGATTCTGTCAATGCTTAAAGTGGTATCTTCAGTGCTTCAGTTTGGAAATATTTCTTTCAAAAAGGAGCGAAACACTGATCAAGCCTCCATGCCGGAAAATACAGTTGCACAGAAGCTCTGCCATCTTCTTGGCATGAATGTGATGGAGTTCACTCGGGCCATTCTCACCCCCCGGATCAAGGTCGGCCGAGACTACGTGCAGAAAGCCCAGACCAAAGAACAAGCAGATTTTGCAGTAGAAGCTTTGGCAAAAGCTACCTATGAGCGGCTCTTCCGCTGGCTCGTTCACCGCATCAATAAAGCTCTGGACAGGACCAAACGGCAAGGGGCCTCCTTCATTGGGATCCTGGACATCGCTGGATTTGAGATTTTTGAGCTGAACTCATTCGAGCAACTGTGCATCAACTACACCAACGAGAAGCTGCAGCAGCTCTTCAACCACACCATGTTCATCCTGGAGCAGGAGGAGTACCAGCGCGAGGGCATCGAGTGGAACTTCATCGACTTTGGCCTCGACCTGCAGCCCTGCATTGACCTCATCGAGAGACCTGCTAACCCTCCTGGCGTGCTGGCCCTTCTGGATGAAGAGTGCTGGTTCCCTAAAGCCACAGATAAGACCTTTGTTGAAAAGCTCGTTCAAGAGCAAGGGTCCCACTCCAAGTTTCAGAAACCACGTCAATTGAAAGACAAAGCTGATTTTTGCATTATCCATTATGCAGGGAAGGTGGACTACAAGGCAGACGAGTGGCTGATGAAGAACATGGACCCCCTGAATGACAACGTGGCCACCCTCCTGCACCAGTCCTCTGACAGATTCGTGGCAGAGCTCTGGAAGGATGTGGACCGGATCGTGGGTCTGGATCAGGTCACGGGGATGACGGAGACGGCATTCGGCTCCGCCTATAAAACCAAGAAGGGCATGTTCCGCACTGTCGGGCAGCTCTACAAAGAATCGCTCACCAAGCTGATGGCGACGCTCCGGAACACCAACCCGAACTTCGTGCGCTGCATCATCCCAAATCACGAGAAGCGGGCTGGGAAACTGGACCCACACCTGGTGCTGGATCAGCTCCGCTGCAATGGCGTCCTGGAAGGGATCCGCATCTGCCGCCAGGGCTTCCCCAACCGGATCGTTTTCCAGGAATTCAGACAGAGATACGAGATCCTCACTCCAAATGCTATCCCTAAGGGTTTCATGGATGGCAAACAGGCTTGTGAACGAATGATCCGGGCTTTAGAATTGGACCCAAACTTGTACAGAATTGGACAGAGCAAGATATTTTTCAGAGCTGGAGTCTTGGCACACTTAGAGGAAGAACGAGATTTAAAAATTACCGACATCATTATCTTCTTCCAGGCTGTTTGCAGGGGTTATTTAGCCAGAAAGGCCTTCGCCAAGAAGCAGCAGCAGCTGAGTGCCCTGAAGGTGCTGCAGCGCAACTGTGCCGCGTACCTGAAGCTGCGGCACTGGCAGTGGTGGCGCGTCTTCACCAAGGTGAAACCACTCCTACAAGTCACTCGTCAAGAGGAGGAGCTCCAGGCCAAAGATGAAGAGCTGCTGAAGGTGAAAGAGAAGCAGACGAAGGTGGAAGGGGAGCTGGAGGAGATGGAGAGGAAGCACCAACAGCTGCTGGAGGAGAAGAATATCCTGGCAGAGCAGCTGCAGGCGGAGACCGAGCTCTTTGCCGAAGCAGAGGAGATGAGGGCCAGACTTGCCGCTAAGAAGCAGGAATTAGAAGAGATTCTCCATGACTTGGAATCTAGGGTAGAAGAAGAAGAAGAAAGAAACCAAATCCTCCAAAATGAAAAGAAGAAAATGCAAGCACACATTCAGGACCTGGAGGAGCAGCTAGATGAGGAGGAGGGGGCTCGCCAGAAGCTGCAGCTGGAGAAGGTGACGGCGGAGGCCAAGATCAAGAAGATGGAAGAAGAGATTCTGCTTCTGGAGGACCAGAACTCCAAGTTTATCAAAGAAAAGAAACTCATGGAAGATCGCATTGCAGAATGTTCCTCTCAGCTGGCTGAAGAGGAAGAAAAGGCAAAAAACTTGGCCAAAATCAGGAATAAGCAAGAAGTAATGATCTCGGATTTAGAAGAGCGCTTAAAGAAGGAGGAGAAGACGCGCCAGGAGCTGGAGAAGGCCAAAAGGAAACTGGACGGGGAGACCACGGACCTGCAAGACCAGATCGCCGAGCTCCAGGCGCAGATTGACGAGCTTAAGATCCAGGTGGCCAAGAAAGAGGAGGAGCTGCAGGGTGCCCTGGCCAGGGGTGACGACGAGACGCTACACAAGAACAACGCACTAAAAGTCGTGCGAGAGCTGCAGGCCCAGATCGCCGAGCTGCAGGAGGACTTTGAATCTGAGAAGGCCTCGCGGAACAAAGCAGAGAAGCAGAAGAGGGACTTGAGTGAGGAGCTGGAGGCACTCAAGACGGAGCTGGAGGACACGCTGGACACCACGGCGGCCCAGCAGGAACTGCGTACAAAACGAGAACAAGAAGTGGCGGAGCTGAAGAAGGCTCTCGAGGAGGAAACGAAGAGCCACGAGGCTCAGATCCAGGACATGAGGCAGAGGCATGCGACCGCCTTGGAGGAGCTGTCGGAGCAGCTGGAGCAGGCCAAGAGGTTCAAAGCAAATCTGGAAAAGAACAAGCAGGGCCTGGAGACAGACAACAAGGAGCTGGCGTGCGAGGTCAAGGTGCTGCAGCAGGTCAAGGCTGAGTCCGAGCACAAGAGGAAGAAGCTGGACGCCCAGGTCCAGGAGCTCCACGCCAAGGTCTCAGAGGGAGACAGACTCAGGGTGGAGCTGGCAGAGAAAGCCAATAAGTTACAGAATGAATTGGATAATGTCTCAACTCTTCTAGAAGAAGCAGAGAAGAAGGGTATTAAATTTGCTAAGGATGCAGCTGGTCTGGAGTCTCAGCTCCAAGACACACAGGAGCTTCTTCAGGAGGAGACGCGCCAGAAACTGAACCTGAGCAGTCGGATCCGGCAGCTGGAGGAGGAGAGGAGCAGCCTCCAGGAGCAGCAGGAGGAAGAGGAGGAGGCCAGGAGGAGCCTGGAGAAGCAGCTGCAGGCCCTGCAGGCCCAGTTGACGGATACCAAGAAGAAAGTAGATGATGACCTGGGGACAATTGAAAATTTGGAAGAAGCCAAGAAGAAGCTCCTCAAGGATGTGGAGGTGCTGAGCCAGCGCCTGGAGGAGAAGGCCCTGGCCTATGACAAGCTGGAGAAGACCAAGACCCGCCTGCAGCAGGAGCTGGATGACCTGCTGGTAGACCTGGACCACCAGCGCCAGATCGTCTCCAACTTGGAGAAGAAGCAGAAGAAGTTTGATCAGCTGTTAGCGGAAGAGAAGAACATCTCTGCCCGCTACGCAGAAGAGCGCGACCGGGCAGAGGCAGAGGCCCGAGAGAAGGAGACCAAAGCCCTGTCCCTGGCCCGCGCCCTGGAGGAGGCCCTGGAGGCCAGGGAGGAGGCTGAGCGACAGAATAAGCAGCTGCGGGCGGACATGGAGGACCTCATGAGCTCCAAGGACGATGTGGGCAAGAACGTTCATGAACTTGAGAAATCCAAACGGGCCCTAGAGCAGCAGGTGGAGGAAATGAGGACCCAACTGGAGGAGCTGGAAGATGAGCTCCAGGCTACAGAAGACGCCAAGCTTCGCCTAGAGGTCAACATGCAAGCCATGAAAGCCCAGTTTGAGAGAGACTTGCAGACCAGGGATGAGCAGAATGAGGAAAAGAAGCGGCTGCTCATTAAACAGGTGCGGGAGCTTGAGGCAGAGCTGGAGGATGAGCGGAAACAGCGGGCCCTGGCTGTTGCCTCGAAGAAGAAAATGGAAATAGACCTGAAGGACCTGGAGGCTCAAATCGAGGCAGCTAACAAAGCAAGGGATGAAGTGATCAAGCAGCTCCGCAAACTCCAGGCTCAGATGAAGGACTACCAGCGTGAATTAGAAGAAGCTCGTGCATCCCGGGATGAGATTTTTGCTCAATCCAAAGAGAGTGAGAAGAAACTGAAAAGCCTGGAAGCAGAAATCCTTCAGTTGCAGGAGGAACTTGCCTCATCCGAGCGAGCCCGCCGACATGCTGAGCAGGAGAGAGACGAGCTGGCGGACGAGATTGCCAATAGCGCCTCCGGCAAGTCTGCACTCCTGGATGAGAAGCGGCGTCTGGAGGCTCGGATCGCACAGCTAGAGGAGGAGCTGGAGGAGGAGCAGAGCAACATGGAGCTGCTCAATGACCGCTTCCGCAAGACCACACTGCAGGTGGACACGCTGAACACTGAGCTGGCGGCCGAGCGCAGCGCTGCCCAGAAGAGCGATAATGCGCGCCAGCAGCTGGAGCGGCAGAACAAGGAGTTGAAGGCCAAGCTGCAGGAGCTGGAAGGCGCTGTCAAGTCCAAGTTCAAGGCCACCATCTCTGCTCTAGAAGCCAAGATTGGGCAGCTGGAGGAGCAGCTTGAGCAGGAAGCCAAGGAAAGAGCCGCTGCCAATAAACTAGTCCGTCGTACCGAGAAGAAGCTGAAAGAAATCTTCATGCAGGTTGAAGATGAACGCCGCCATGCTGACCAGTATAAAGAACAGATGGAGAAGGCCAATGCCAGGATGAAGCAGCTCAAGCGGCAGCTGGAGGAAGCAGAGGAAGAAGCTACACGTGCCAACGCATCTCGGCGCAAACTCCAGCGGGAACTGGATGATGCCACTGAGGCCAACGAGGGCCTGAGCCGCGAGGTCAGCACCCTGAAGAACCGGCTGAGGCGAGGCGGCCCGATCAGCTTCTCCTCCAGCCGATCAGGCCGGCGCCAGCTGCACATTGAGGGCGCGTCCCTGGAGCTGTCGGACGACGACACAGAAAGTAAGACCAGTGACATCAACGAGACACAGCCGCCGCAGTCCGAGTAAGTCCAAGGAAGCCGGAGGAAGCAATACTGCGGGATATGCAGGAAGTCATATGCAGGCCCCACCTTGGGGCCTCCTGCAGATCTGGGGAACCGGAGAGCTGCGAGACTCCTTCCTGAGAGATCAATTGTGTCTTAAGGCCTCATGGCCTACACACACGTCTCCTGCTTCAGATTTAGGTACAATTGCTCCCCTTTTTTTATATATATATATATACACAAAACCTACACATATTAAACAGATCGCCTCATCATTGCATCTATTTTCCATATATCCACCAAGAGACCATTTTATAATACATGTTAAGAGAACCCTTTTTCAAACTAACTGCAGACCCGCTGCCAGTCGCTGGGTCATGGGGCCGCCTAGCGGTTGCCGCCCCGTCGCTCTGCATGCTCTGTCGTACAGACAGCTACCTTAGTTCTGTGTTCACGTGGCCCCTGCCTCCGCAGCCACATCAAGTCCCTTAGAACGTTATGGAACCTAAACTGCACCTGTAGCTCTCATTTCCTTCAGATGATGATTGATACTATTTCAGTGCGCAAACTGTGAAAGGGGCTTCAGCGAGATGGGGGGGTGGGTTGGGGGAAGCAGCATCCATGGGGGTTGCAGTGCCCCTCTCCCTCAAGTCGTGGGGTCCCCGCATCTCTTCACGTGAACTGTCTTCAGCCAGAGCTGCTCTGTGCCAACAGGACAGTGGCCACGATGCAGCCGAGGCCCAGGGGCAGCCATCACAGTGACTTCTAGATGGCCTGCTCCTCGCAGCCACAGGCCCCCCAGAGCAGAAGCTAGGGGGCGCACTCTTCCTCGCCAGCCAGGCTCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCCCAAAATGGGAAGATTGGTTTTGTGTCCGAGACTTGTTCAAGTCTGTCAGTGAGAGGGACAGCACCTCGGGAACAGAGGCCACCCGCCTGAATGTTGACATGCCAGTGGATGACTCCTTTTTCATTTCTCCCTCCCCACCCCCTCGGGACAGTGTTACAGTAAACATTTAGCATTCTGTTTTGGGTTGATAGTTAATCAAACTGACATTACAGAAAGTGCCTTAGACACTACAGTACTAAGACAATGTTAAATATATTATTTGCCTCTGTAACAATTTAATGTATTAAGTTTTGACTGTGCTTCATATCATGTACCTCTCTAGTCAAAGTGGTATTATAAACATTCAGTGACAATGAATCAGTGTTAATTATAAATCCTTGATCCTCTGCAACGTGCTTGAAAACACAAACCTTTTGGGTTAAAAGCTTTAACATCTGTTGGGAAGAATTTGTCATGTGGGTTTGGAATCTTTGATTTTTCCCCCTTTATGAATTGTACTGGCTGTTGACCACCAGACACCTGACTGCAAATATCTTTTCTTGTATTCCCATATTTCTAGACAATGATTTTTGTAAGACAATAAATTTATTCATTATAGATATTTACGCCTGCTCTGTTTACTTGGAGGAAAAAGCACCCGTGGAGAATAAACAGACCTCAATAAACAAGAATAATCATGTGAATGTGCAATCTGTTTTCTCACCTTCTGTTCTGGTTGGACACTACATAGACTTACGTGCTGATAGCCAGGCCACTTGTTCCGAGGGCACCGCACGCCCAGAAACTGTCAGGTGACAGGTGAGTTCTCTGGGCGGGCTGGCGGCTGTCCTGCTTTGCCGATGAGTGGTCCAGGACTGAGGGATGAAGTCTCTAGGACGGTTTCAGTGTCCAATCAATGAAGCCCATTACTGGATTAGAGTATTTCAAGAGGCCTGAGACGTTTCAGGCTATTTTCAGGCAGGATGCATATTAAAAATGCTTTTGGGAGGATTCGGTGGTGAGATCCACGGGCAGCTGTGGGCCAGGTAGGATGGGCTGGAGAGAAATCTAGGGGAACACAGTCACGTGGCCATGCTGGGGCTTTTTTATGATATGCTCGAGTTAGGCTCGTTCCGGTGGTCTGAAGTACATACTGAAGCTGCTTGGCAGTTGT EMBV3_10363 TTTTCAAGATTTTTTCTTAAAAAGAGGAGAGAAAGATATTTTTTCAGGAAAAACAAACTT Gene GeneID:507934|TOB2:NM_001083387:150_cdna Constitutive 0 NULL GeneID:507934 5 GENE TOB2 MGC139323 transducer of ERBB2, 2 EMBV3_27767 TGAGTGCCTGTGCACGACCCTGAGTATTTCCTGACCACAATAAGACCGACGCGAACATAA Gene BVV0101_052861 + 0 NULL GK000012.2:20358216-20417679 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220566 TCONS_00238581 TCONS_00118040 TCONS_00210913 TCONS_00219592 TCONS_00242420 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00196822 TCONS_00123823 TCONS_00001867 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00132066 TCONS_00174807 TCONS_00055559 TCONS_00198905 TCONS_00174805 TCONS_00170890 TCONS_00206300 TCONS_00171428 TCONS_00205125 TCONS_00165821 TCONS_00174806 TCONS_00056149 TCONS_00160961 TCONS_00125692 TCONS_00001866 TCONS_00110426 TCONS_00206299 TCONS_00218430 TCONS_00246741 TCONS_00170891 TCONS_00103962 TCONS_00001865 29 XLOC_133883 XLOC_145248 XLOC_072206 XLOC_129423 XLOC_132911 XLOC_149084 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_118487 XLOC_075375 XLOC_000454 XLOC_083377 XLOC_104695 XLOC_080699 XLOC_033367 XLOC_120558 XLOC_103679 XLOC_124877 XLOC_103815 XLOC_124587 XLOC_100661 XLOC_033952 XLOC_097854 XLOC_077234 XLOC_066330 XLOC_131750 XLOC_151107 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_34907 AGGCCTCCGTCGTGAAGACCTAGGAAGGATAGCAAATTGTATTTGTTCATTGCTTGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22451 CTTCAACCTGAAATAGAAAACAAATGGCTGGCCTCGACTGTTTGGACCATGGGAATTTGG Gene BVV0102_412557 + 0 NULL GK000025.2:16908661-16974399 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146403 1 XLOC_089091 Coding TCONS_00146403 XLOC_089091 Coding Coding ITPRIPL2 25:16969771-16976065 o TSS109461 6294 1 TCONS_00146403_3 532 0.0428979980934223 1 0 0.00032243509926796 0.000176770757918003 0.000281630696121274 0.000150565475424258 0.000205519954247961 7.69063918974294e-05 0.000116018399791357 0.00015411742124633 0.000124489680397444 0 7.86673728845464e-11 3.01311498994704e-06 6.3710883210073e-05 8.14710630760288e-07 6.96452791399155e-05 0.000814082569120121 0.00024795277408149 0.000179651214863105 9.00961495321412e-05 0.000228515853097177 1.77931354169667e-05 9.66786081671693e-05 3.87632514457231e-05 0.000399537195416322 0.000631464216033073 0.000330410821779576 5.98822079228665e-05 0 0 2.11997655957151e-10 XM_005196929.1 ITPRIPL2 PREDICTED: Bos taurus inositol 1,4,5-trisphosphate receptor interacting protein-like 2 (ITPRIPL2), mRNA. 0.0 1.135e+04 100.00 0.99984111852558 NM_001034841.3 ITPRIPL2 Homo sapiens inositol 1,4,5-trisphosphate receptor interacting protein-like 2 (ITPRIPL2), transcript variant 1, mRNA. 0.0 2740 76.17 0.585795996186845 TCONS_00146403_3 sp|Q3MIP1|IPIL2_HUMAN IPIL2_HUMAN Inositol 1,4,5-trisphosphate receptor-interacting protein-like 2; 0.0 872 88.60 0.99812030075188 1 coding 0 0 0 0 -0.0538643656349969 0.624143713870741 -0.00186352132877021 0.97027827790701 TGGGCCGGGGGCGCCGCCGGGGCTCGCGCCCTGGGCTGCTCCGCCGTCGCTGCCCCCGGCGCCCGGCATGTCGGTGCACTACACCCTCAATCTGCGCGTCTTCTGGCCCCTGGTGACCGGCCTGTGCACCGCCCTCGTGTGCCTCTACCATGTTCTGCGGGGAAACGCGGGTGCCCGAACCGAGCCCCCAGACGGCGCGGACGGCGGCTTCCCGCTGCTCAAGGTGGCGGTCCTCCTCCTCCTTGGCTACATCCTCCTGCGCTGTCGCCACGCTGTCCGACAGCGCTTTCTGCCCGGGCCTCCCCGCATGGGGGGCCACTCCACCTTCTCGGCTAAACACTTCCCCGAGCCCAGCCTAGACATCTTGCTGGAGAGTTACTACGAACACGAGGTGCGCCTGTCGCCGCACGTGCTGGGCCACAGCAAGGCACACGTGAGCCGCATTGTGGGCGAGTTGGTGCGGGCTGGCCGTGCCCGAGGGTCCCCAGGCCCCATACCTGGGGGAGCGCTGGCCTTGGCCTTCCGCGGAGACTTCATCCAGGTAGGGAGCGCCTACGAGCAGCATAAAATCCGCCGGCCCGACGGCTTCGACGTGCTCGTGCCGCTGCGCCTCCCTCCCCTGGTGGCGCTGGAGCCTCGGAGCCTGGGCTCAGAGCCCGAGCTGGCTCCAGCCTTCCACGGCTGCTTCGTGTGTGCACTCAAGGCGCCGCCAGGGGCTTCCGGCGGCCACTGGCTCCGGGACTGCAAACCCTTCTCCGACGGCTTCTGCGTGGATGTCCGCGGGCGGCGCCTCCTCTCGGCCACGCTGGTACTGCGCTGGTTCCAGGCGCACCTGCAGCGCTCCCTGGCCACGGTGCGCTACAGCCTGGAGGGGCGTTGTCGGGTCAGCCTGACCCCGGGCGGTCTGGAGCAGCCGCCCACCCTACACATCTTGCCCTGCCGCACCGATTACGGCTGCTGCCGCCTTTCCATGGCCGTGCGACTCATCCCTGCCGTCCATTTGGGCGACAGCGTCTTCCTGGTGGCGCCACCACCGCCACCCTCACCTGCCGGGCCCCTGTCGGAGCTCCCGGAAGGCCTGCGTGCCGATGCCCTGTGGGGGCTGAACACAGCGCGCCAGGAGCAGAAGCTGCTGAGTTGGCTGCAGGAAAGGGCCCCTCCAGGTGCCTGCTACCTCAAGTGCCTGCAGTTGCTTAAAGCTCTGCGAGACCTGGGCGCCCGCGGGCTGGACCCGACGGCCGCCGCGCAGTGGGGACGCATCCTCTCCTCATACGTGCTCAAGTCGGCGCTGCTGGCGGTGCTGCAGCGCGAGGGGGCTCCGGCACCAGGCTGGGACGAGGCGCACCTGGGCGACCGCCTGGAGGAATTAGTGCAGTTCCTCAGGGACTGCCTGCTGCGACGCCGGACGCTCTTCCACTGCGTCCTGGGCCCTGGAGGGGCGGCCACCGAGGTGGGCCCGCTACCCAAGGTACTGCGTGAAGCTGCCCCAGTTGACCTCCTGGCGGCTTTCGACCGGCAGGTTCGGGAACTCGCAGCGGCGCGGTTGCTGTCCACGTGGCGAAGGCTGCCCCAGCTTCTCCGCGCTTATGGCGGTCCCCGCTACCTCGTCAGGTGTCCGCCACCCCGGAGTCAGCGCACCCAAGGGTTCCCTGAAGATGAACCATAAACCCTGTTAGAGCCCCCACCTGGCCCAGTGCTCCTGCAGCCCCACTCCACAGGTGGGGCGGGGATGGCAGTGAAGCCTGTTTAAGTCAAGGAAGATGACCTGCAGAAGGGGTTGGAATATTCAGAGCAGTGGCATCTGGCAGCTTAAACATCACCCCGGCTCCACCATCCAGATAATCATGGCATCTTCACACCCACCAGAGTGTCCTGGATGAGCTATGGAAAGACAGCCACCATGGGCAACTGAGAGTTGGTCCAAATGTTGGTTTGTGTGGAATGATTCTGTAGAAAGATTTAGCTTTTAGGGAGGTTCAATAAAGCAAGAACTAGCTGCAGAAAAAGTTCCCTCTGCCAGTTATTTAGAAGATCTCTCTTGCCCCCCAGTTTAAAGAAGCTAATGGTTTTTGTTTTTGTTTTGTTTTTTACATAACTACTTGGTAGGTCCTGGTTTCCTGGTTGTCTTTTTAAAAATCTGGACCTTTCTCTACAACTGGAACTGTAATTCATGTTCTGAGGTAGTTTCCACTGTTCAGATAAATATTAAGGTCTTTTTAAAGGGTTCCATCAAGGGTGTTTGACAGGATTGTGAAGGATTAAGTCACAGGTGTTGAGCCGCAGTCAAGAGCTGGTTAGTGAAACTTTCAGAGCAAACAGCACTTTATCGATCAGTTCTTTCATTTTGGGGTAATTGCTAGTGCCACGTGTGGCATTGGAAAGGGAGGCCAGTTACATTTGCTATGAAGGGAGGTGCAGTCTTGAAAAGCAGGCTTGCTCAACACAGCTCCAGGCAGGCGCTGGGATGAGCGCTCATCAGCCCCTGCTGTGAGCCATGCTCAGGGCGGAGTGACAATGCTTCAGACAGCACTGGTGAGGGCAGAAAACATGTTGAGTCTCGAAAAAGATGAAGTTCACTCTGCCTAGCAAGGTGACTCGCCAGGGCTTGCTGCTGGCTAGGGGGAGAAACCTGTTTTTGTTTGTTCATTTTTGTTTTAAAGTCTTTTTAGCAAACTCCTTTTCTTTCTGAGTTTAATGAGATAGTGAAGAGGCAGTGCCTGCTCTCAGCCAATCTCAGTGATCCTTCGTGGTTGGGACGTTTTGCTCTGATTGCCTAAGCAGCCTTTTAGCGGCCCAAAGGCCACCTTTGAGAAGCAGTTGGTTCAGCACAGGTCTTGCGATGCATTTCACTTAGAGTTCAGCATCTCTGGGCTCTATGCTTGAAGATCAGTTATTTCTCAGTCCGTCAACAGGAGAAAGACAGCAGGGGAGGGCAAGCTAAGGGGAGATGGAGGGAGACAGCCCTTGTCAGCTGTACCCTCTTTCTTCTCTTTGAGCATAAACATCACCAGGCTGAGTGTATTTTGCAGGCCGTCCATTCTGAAATCCCTCTGTCCTCCCAATTTTCTAATAGCTCTCAATTGCATCAGTCAACATGAAACTCACTTGACGTTTAGAATGGGCCATCATCTGCTGAATAGAAAATACAACCAGTTCCAGTGATACACTTTAGGTTTTTTAACTTTTTCTTTTTTTAACAGAGACTTTTAAAGGTAAAACTTGGAAGACAGAAGTAGTCACGTGAATTGGGCCATTGTTTAATTTCTGAGCTATTTGGAGGGAACTTTTAAAACTTTTTAGGGGCCCTACTTGGCCACTGTGGGGAAATCGTTGTGAATAGATGACTTATAGGGAATCCTTCTCATCAGAACTGCAGAGATTTCTTAGTCCTTTGCAACCTTGGACTACAAGAGAAACAGTTGCAAATGTTGTGCTGTCTCTTTGGGGTTGCGCTGGGGACATTTCCCCTGGATACCACAAAGTCATTCCTAGTTTTTGAGGTCAGTGTTAGGTCGTAAGGTACTGCATTTAGCAAAGGAATCAGTCTACCAACTTCCTGCAAAGATATAAACTGCACAGTGTTTTTTTTTTTTTTTAATTACTTTTTAAATAAATTTCAAGAGTAAGTAGATCTTTATATAAATATATATTTATAATGTTTCCATACTCAGCTACAATTTCCCCTGTAGTTGGAATAGGGGAAAGCGAGGCTATTGGGGGGGGGGGTATTATAAAGCTTTAAAAGCTGAATTTTCCAAATATTTCTAGTTAAGTTGATAGGTTCCTTTTTTGAATAGCATTTTGATGTTTGAATCTAGTAACACACTTACTGTTCTTGTAGTTTGTTTGTTTTGTTTTTTTTTTTTAGGTTAATTACCCAAAGCCTCATCCATCCTCAAGATTTTTTAATTTTATTTTTTTTAATTAATGGGGCATTGTGTTTGTGAATTTTTAAACTATTAATGTTTTATTTAAATGCCATGCTGAACAACTGTTCTCTGTACATGGTAACCAAAAACTTGGAGATTTCGATCAATTTTGATCAATGTTTAGTAATCCAAAACATGTACTGTGTACAAACGAAATAATATGGCATGTTAGCCAGGTGTGATGGTTGCCCATGGCACTTAAATTAAGCTCAATTCTCTATTTTATTAGGGCTCCATCATGTCCTTGATCTGAAATATATACATTTTTGGTGTATACTTGGTACTGGAGATTCATAAATGCAAATATTCTCATTCCAGAAGGCTCAAAATTGTTCATGCTCTGAAAAAAAAGATTAACTGTCCAGCCGGTGTCTGAAGAAAATATTTTGGGGAGATGACTCAGCCTTTTTGCCGTAAGACACACTTTAGTAACTCCCACTGACCAGTCTTGGGAGCCATGTCGAAACGCTTGTGGGCTAAGAGACGGAGATTTTTTTTTTTTTGCAAAATGAAACTGAAGCTGAAAGAAGGGAAAATGTGAGCGAACGAAGAGAAATCTGAAGATTTCAGGAAGGAGGACTTAAGATGGATGTGAAAGGAAGAGCTGGGCAGAAGAATTCACTCCATGGGGTGAAATCACATGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACACGTTGTTTAGATATGTGCTATTTCAAACCAGGGGTCGCAAACTCAGCAGCCTGCAGAAGCAAGACAGGGAGGTAAATAGGGGAGGGGTGGGGGGGTACTCTGCCCGTCTTCATGGGGCACATTGCTCAGTTCTATGCAGGGAAGAGGGTAGGGTGCGGCTGGAAATAAAAAAAGTCAGGATTGTTTTTTAAAAAGGAAGCTTTCTGATTTTTAAACAACATAATTTTAAAAAATCCAAAACACATGTGGGCCAAAAATACATTTGGATGAGCCTGGGGGCTACCAGTTTGCGATCCCTGCCTTACACAGTTAACCCCTCAAGTATGAATAAGGTTATATTTATTGTTATGGGTATGATGTTGTACTATGTGGTTGGGGGTGATATTTCAAGTCTACTTTCTCTCTCAGAACTAAGCTTTATTGTAGAAACAAATCCCCCAAATTAACACTGCCACAGGTAACACTTAACTTAAAATTCCCAGGAGGATTCTCCATCCTAGAGCCGAAAGAGTCAGACTGGATATCAGGCCCCTGGGGACCAGCTCTTGGCATTTCCTTCGTGGTGAGTTGGGCCTGAATTCCTTGGCTCTATCAGAGTCTGCAGATGAGTAATCAGGAAGGATTGTAGAATAACTTGTTTCTTCTTTATTTGTGTGTTATTCTTATTTTTAAATTAAGTTTTGTTTTTTAGTCGTTTCCTAGCCTTTGGGATGATAGTTGGTGGCAGTGAACACCAGAGAAGCATGCCAGGGCCTCCCTGCCAAGCTTCTTAGGCTTGTTACCAGCCCCACTGTTAAGAGCACTGTTCTGATCAGATGTTCCTATCTCTTTCTGACTCAATGGCTCCCACCAAAAGTGACATCCTAGCTGGAGGAATTAAACTAATAGCTTTCCAAAGTGTTTCCTTTAGCCTCAAGAAGTCAGTCACTTTTTCTATAAAATGTGGCTTTTGACCTTGATGATGATTTAATTGATCATATACATGGGGAGGAAGATTATTATTATCCCTCCCCAGTGGTGGAAAAAATAAACTTCATGGACATTTCCATTATCCCTTGGGAGGGAAAAAAGTTCAGTGTTATCATTGTGGCATTTGTTAATTTTTTTTTTTTAATTGCTTGTCTGTTTCCTAGACACTACTGTTAATTTTTTTTATACTTTCATAGCACATGATTCAGTGGGAATAGAGCAAGTATACGTTGGGAGAGGATGAAGATATATGTGATCATCTGTACAGAGAGAATGGACTAAAACGTGCAGCTAAATCACATGTAATCTCGTTTTTTAAGTATCAGATATTCAGGAATATTGTGAGCACCGTTTACTTTTTTTTTTAAGTGCCTTGATTCAGTCACTTGACTTTAAAACATTCCTCTTATTTTATTGTTATTTTTAGTGTGGATTTTGACCCTAAACTGTGTATTATGATGCTGTCTATCGGCTGCGGTCATAGCATATGTTTTGTTCCAATAACAGAGACCAAAGAGGTGATCAAATATGGTTCAGCTGCTACAGTTGTGTGATTAAAAGGTGCTTTAATCACACCAAATTCCCATGGTCCAAACAGTCGAGGCCAGCCATTTGTTTTCTATTTCAGGTTGAAGTAAATTTGCACTTTTAATCATATGGGTCATTGGGGACCTTGTTCTTTCATACTTTGCTTTATTAATAAAGGAACTTATAGAAACCTC TCONS_00146404 s 5' 0 TCONS_00146404 s 5' 0 EMBV3_03964 ACACGCTACCCCTCAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGGGATTTCC Gene GeneID:788252|LPHN1:NM_001113728:52_cdna Constitutive 0 NULL GeneID:788252 7 GENE LPHN1 NULL latrophilin 1 EMBV3_36373 AAGAGCTGACCATATCCGTGGGGGTGGATGGGACCCTCTACAAGCTGCACCCTCACTTCT Gene GeneID:510616|HK3:NM_001101929:8_cdna Constitutive 0 NULL GeneID:510616 7 GENE HK3 MGC152634 hexokinase 3 (white cell) EMBV3_17963 GCAGGAGAAACGTTTCTATTCCTTTTCTGACGCAGGGTTCCCAGGAGTTGTACTCAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40548 ATCATCGACATGGATGCTGTGTGTAAGAGGGTCACTACACTGGGCTTAGATGTGTCAGTG Gene GeneID:615089|PGPEP1:NM_001109983:116_cdna UTR3_Alt 3 NULL GeneID:615089 7 GENE PGPEP1 NULL pyroglutamyl-peptidase I EMBV3_16479 CTGCTGCTAACATGACTGCTTCTCCCAGAGAACACATTGAGGTCCAGACAGATCCAAACC Gene GeneID:534434|LOC534434:XR_083899:436_cdna Constitutive 0 NULL GeneID:534434 17 PSEUDO LOC534434 NULL similar to chromosome 12 open reading frame 51 EMBV3_03086 ATGGCCATGACCGTGGTCACCAAAGAGAAGAACAAGAAAGTTCCCACCATCTTCCTGAGC Gene GeneID:514313|PACS1:NM_001143870:622_cdna Constitutive 0 NULL GeneID:514313 29 GENE PACS1 NULL phosphofurin acidic cluster sorting protein 1 EMBV3_02550 TAAGACAGGGGAAGTCTGAATAAGATTGGATTCTATGTCAAATGTCAATTCCTGAGTGGC Gene BVT0102_024206 + 0 NULL GK000010.2:28578630-28641494 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013346 TCONS_00013347 1 XLOC_008097 Coding TCONS_00013346 XLOC_008097 NonCoding Coding AVEN 10:28616302-28634729 j TSS9932 953 2 TCONS_00013346_1 38 0.273871983210913 4 0.948496689460545 0.00322631425175573 0.00200866655025607 0.00363995691919623 0.000948089648237168 0.00169485337472156 0.000334868108164102 0.00260960116072868 0.00217876454632504 0.00198256827639475 1.10271174510542e-15 6.91955295599934e-05 9.42130760323155e-15 0.000164120854097154 1.02003195387162e-05 6.39387229747277e-08 1.72896784620319e-21 2.68979027189846e-159 0 0.00133338522949653 0.00166761317336843 0.000168819352186098 1.42176887348431e-150 0 7.92122728073273e-234 0.00034734555286471 0.00168365115513181 0.00106916950875592 1.23047984857182e-43 1.08255818366836e-119 0 XM_002700566.3 AVEN PREDICTED: Bos taurus apoptosis, caspase activation inhibitor (AVEN), mRNA. 2e-86 324 100.00 0.186778593913956 XM_005254563.1 AVEN PREDICTED: Homo sapiens apoptosis, caspase activation inhibitor (AVEN), transcript variant X1, mRNA. 2e-66 257 92.09 0.184679958027282 0 noncoding 0 0 0 0 -0.0617438619434094 0.646417535583667 0.0179631280359642 0.740141935193632 TGAGCTGGTGCTCTTGTCAGGAAAGGAAGAGAGACCAGAGCCCTTTCTCCTTGACTTGTGAGGATATAGCGAGAAGGCAGGCATCTAACCAGCCAGTGATACTATCAAGTGGAAGGTGAGAAACAGGCTGGCCCTCAGCTCAGGTGTGTGGCATATCTCATAGTTGAAGAGGTCGAGAGAGCTGCTGCCACCGCGAGCAGCAGCAGAACTACCGGGAAGACGCACCAAGGGAGAGCTGGTGACGATGTGTGCAGCTCAACGCTGTGGACAGGTTACTTGAAGACTTGGAAAAGCAAAGAAGAGCTAACAGGTGGTCCTGGGGGTGAAAACCTGGATTGAAGATGACAGTGATGCAGAAACCTATGGAGAAGAGAATGAAGAACAGGGAAATTATTCTAAAAGGAAGATAGTCTCTAACTGGGATCGATATCAAGATACTGAAAAAGAAGTTGATAATGAAAGTGGAGAATCACAGAGGGGGACAGATTTCAGTGTTCTTCTCAGCTCTGCAGATTGACTCCCTGGAGTGATGCACAGCAGTGTGAAGCTGGAGAGTGGTGACAGGAAATGGAGCAAAGCTGGTTGTATAGAAGGCCATTTGCTACCAGGCTATGGCCTAAGAACTGAAGTGACGAATGACGGATAGACTTGTGGTTTTCAGGAGTTAGTGCTCATATTGATCAATATCTTGATTGTGGTGGTGAACACACAAACTTACACACACACTCATAATACATACAAGTGAGCACAAATAAGACAGGGGAAGTCTGAATAAGATTGGATTCTATGTCAAATGTCAATTCCTGAGTGGCATATTCAACTATATAGTTTTGAAAAATGTTACCATTGGGGCCAACTGTATAGGAGATCTTGCTGTATTATTTCTTATAACTATGTGAATTTATAATTGCCTCAAAAAATTTCCAGATTAAAAAAAGTAAAGGATGAAGCCG EMBV3_18362 AGGTGGATCCTTGTGATTGCCTTTTCATCTCCCCTACTCTGTCTCTGGTTGGAGATGGTG Gene BVT0102_376285 + 0 NULL GK000024.2:22306885-22445691 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036952 TCONS_00139898 TCONS_00139902 TCONS_00139903 TCONS_00139896 TCONS_00139899 2 XLOC_021260 XLOC_085008 Coding TCONS_00139896 XLOC_085008 Coding Coding MAPRE2 24:22104096-22364611 j TSS104544 3187 1 TCONS_00139896_3 304 0.0235331032318795 8 0.987797200918185 0.00501607659952642 0.000119782305051405 0.00218648169472558 0.000185269114228289 0.000955485461387178 0.00120104495933288 1.94740437298086e-05 0.00181409971845728 1.51349773794558e-07 1.93904695177585e-12 3.33394074533375e-06 0.000184551844089398 0.00109254124702814 3.0942389544856e-11 0.000117071387810058 7.94023670990062e-15 3.60372475233608e-16 9.91122526110273e-13 1.42426406664835e-09 0.000612894506320049 0.000751589076363197 3.08342973368629e-15 6.28666068570804e-12 3.41452324661331e-15 0.00140459113824855 0.000501026185512303 0.00207942575162359 0.000233926017738502 6.83131580705956e-08 4.10578689352648e-05 NM_001034374.2 MAPRE2 Bos taurus microtubule-associated protein, RP/EB family, member 2 (MAPRE2), mRNA. 0.0 2803 100.00 0.487292124254785 NM_001143826.2 MAPRE2 Homo sapiens microtubule-associated protein, RP/EB family, member 2 (MAPRE2), transcript variant 2, mRNA. 0.0 1460 89.18 0.351741449639159 TCONS_00139896_3 sp|Q3SZP2|MARE2_BOVIN MARE2_BOVIN Microtubule-associated protein RP/EB family member 2; 0.0 600 98.63 0.957236842105263 2 coding 0 0 0 0 -2.36678651735854 0.00375835472913748 0.0240302088948308 0.808359578889705 TTCAGGAAGGCCTTTCCTAATCTCCTAACCACCCCTTCCCACCACCTCCCACTGGCCCACCCATCCAGGATAGGATAGGTGGATCCTTGTGATTGCCTTTTCATCTCCCCTACTCTGTCTCTGGTTGGAGATGGTGGTGGGCTTGTAGTCATCGCCAGACCCTGGGTCCTCAAGCAGCTCTTGATACATAAGAGCTTCCTATTTGGAATTTTCATCATTTTCCAGCCCCCCTGCTTTCATAGATGAAGAAATGCAGAAGACAAGTTTTTTTCCTGCTGGGAAACGGGGTGCTCAGTTGGGGAATGGCGGTCAATGTGTATTCTACCTCGATAACCCAAGAGACTATGAGCAGACATGACATCATCGCTTGGGTTAATGACATAGTATCTTTAAACTACACAAAAGTGGAACAGCTTTGTTCAGGAGCAGCCTACTGCCAGTTCATGGACATGCTCTTCCCAGGCTGCATTAGTTTGAAGAAGGTAAAATTTCAGGCGAAGTTGGAGCATGAATACATTCACAATTTTAAGCTTCTGCAAGCATCGTTCAAGCGAATGAATGTTGATAAGGTAATTCCCGTGGAGAAGCTGGTGAAAGGGCGTTTCCAGGACAACCTGGATTTTATCCAGTGGTTTAAGAAGTTCTACGATGCTAACTACGATGGGAAGGAGTATGACCCCGTAGAGGCACGACAAGGGCAAGACGCAATCCCTCCTCCCGACCCGGGCGAACAGATCTTCAACCTGCCCAAGAAGTCCCACCATGCCAACTCCCCCACAGCAGGTGCGGCTAAATCCAGTCCAGCATCTAAACCAGGATCCACACCTTCTCGTCCCTCATCAGCCAAAAGGGCTTCGTCCAGCGGCTCAGCATCCAGATCTGATAAAGACTTAGAAACGCAGGTCATACAGCTTAATGAACAGGTACATTCGTTAAAACTTGCCCTCGAAGGCGTGGAAAAAGAAAGGGATTTCTACTTCGGAAAGTTGAGAGAGATTGAGCTCCTGTGCCAGGAACATGGGCAGGAAAACGACGACCTCGTGCAGCGACTAATGGACGTCCTCTACGCTTCGGATGAACACGAGGGCCACCCGGAGGAGCCGGAAGCAGAGGAGCAAGTCCACGAACAGCAGCCCCAGCAGCAGGAAGAGTACTGAACCGTCCCGGCAGCTCTCCACACTTCCGTTTTGGTGGGAACTTCTCTTCCGGAGAATTGGAACACGTGTGGCCTCAAGCTCATCAGAAACCAGTTGTTCCCAGTCTGCTGTTACATCATCGCGCCAGCGCCCACGCCAGCACTGCCCTCGGTTCCCATTTCCTTTGCCAAGACACACTAGCAGCGGCCATGGGCGGCCTCCCCGAGACATCCCGGGGGCCACACACCTTCAACTTCCCCACTTGGCTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCACCACCACCACCACCACCACCACCACCACTCCCTTTTTATCCTGGTGTGAAACAATGGTAATTTGATATATGGTATTTATATTGGCATTTCTCAACCCAGTGTCACTAGATGTCACACACATTTGTGGTGCTTTGATGTTTGCAAGTCTAACCTCTGTGAACATAAATTTGGTCAAATAATAAATTGGAACAAAGGGAAACAGATAACTTGATATGAAAGCCATATGACAGTGACTTGTTTCATGGGGAAAAACACAGAGTCAGTTTCTCCCTCCACTCACAAATGAAAGGGAAGAAAAAAGGAATCAAAACTAGGACTTCAGGGCCTAGCAGTGTTCATCCATCAGCATGTTAGACAGCCACACAATATGTTGTTTTGGAAGACATTCACTCAAGGAGAACACCATCGCGACGTGGCCCTCCTACTGCGTGCCCCTACCCCCTGCCCCCACCCAGGTTCTCATGCTGTTTTCTTTCTCAGGGTCCTCTTTGGTGGGCAGCCACTCTCCCCAAAAGCTGTCATCGGGGGTCTGCAGTCAGAGGGGGTCTGCACAGGCACAGGTCCTTCCTGTCTCTTCATGTGGGTTTTAGCCCCAGCCCTGTCATCCACGCTAGGGATCCTAAAGAATGACTTCAGGGTGTGCAGCCCTGGGCGTGCCACACAATTGCTGGAAGGCCTGCAGTGACGACCTTAGGATAGGAGTGTAAGCCCAAGGGAGAACCCTGCTTCTGAAGTCTGGTGTTGACACTGGAAAGACAGCACAGAAAAATCTGACTCCCAATGCCTTCTGGAATAAGGAATTCCCCCTCTTCAGTACGATGGCCCTCCTTGTCATTGACCTTCGCTAAACCGTGGCAATTCATAAATAGAGGAAACATGAATGAATTAAAAGCATTCCTTATTTTTTTTAAACTAATATTTGCACATTTTCTTAGTATCTTTCCAAATCTTTTTCTCCCCCCACCCCCCCACCGCCCCTTTGAAAGATGGTTTCCCTCCCTGGATCATTCACTTCACTTGGTTTCTAACTTTAGGTTTTCTTTCACTTGTTATTTGACTTAGCAGGTGCAACAAAACACAAACAAGTGTGCCCCCCCCTTTCCTCTTAATTGAAAAAGCTTCAAATAAATTTCTGAATTATGTCTCATAAAGCTTTGACATTTCTTTATTAACTGATGAAATATGAATTCTAAATTCTAGCTTTGAAGCTTTCCACCAAAAGGAGTCTTCTCAGATCTTTGGCGGCAGAGTGGTATTTATCGAGTTACACGTGAAAAGGATTGCTTGTATTTTTGAGGTTGTTGCGGACACTGCAGAAGTGGACAGCTGTTCTGTGGGGCTTGGTCTCCCTTTCTTCTCTCTCCTGCTTGCTCTGCACCTCGGCGACAGCCCGATTCTCTCAGGCTGGAATCCGGCCTGGTTCTCTGCGGTGACATCCTCCCACACCTGGTCGCAGGGCGTGGTCGTGCTATACGCAGCTTTGTGCTTCCCGGCATGTCCCCTCCCAAGCCTGTCGCACTCACTGAGTTTCCTTCTTTTCAGACAGCTCAATCACCAGTTTACGAACAAGTGGGTCTTCACAGGACACTGAATCTGATGATGCTGCGTCCATAACTTTCCAACCTCCAGAACT EMBV3_11022 CTGTGAGAGCTGGAAACACCCTCCACTTTGCCTGATGTCTTGGAGTAGGCATTTCATTGG Gene BVT0102_046391 + 0 NULL GK000006.2:28373875-28503855 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204792 1 XLOC_124525 NonCoding TCONS_00204792 XLOC_124525 NonCoding NonCoding - 6:28469167-28497241 - TSS153115 1663 1 TCONS_00204792_4 113 0.467227901383043 3 0.940868450112207 0.000740475881545641 0.000193918250893411 0.000797690686911527 5.75534149803425e-05 0.000803328075768392 5.08949353666565e-05 0.000236475386164063 0.000319970052489901 0.000251703365385801 6.30808705435216e-05 0 1.33205521960841e-28 1.90217974610823e-22 6.46181076815134e-05 0.000243006136963386 0 9.98332675129542e-06 0 0.000489866824812489 0.000480189768957566 0.000159343121935322 0 5.51655743928341e-06 1.00809633721813e-05 0.000398586811543705 0.00051356945877048 0.000125623480043948 0 0 0 NM_001101046.2 PDHA1 Bos taurus pyruvate dehydrogenase (lipoamide) alpha 1 (PDHA1), 2e-163 580 93.80 0.230907997594708 0 noncoding 0 0 0 0 -0.478210801926853 0.0201893989552637 0.027402815185554 0.667927368736161 GAAGTAAACAGCTATCTGAGAAAGCCCACCTGGCAAGCAATCACTGGTGTTTGATTTGTAGCACCTGAGGGCAACCTCAGTTGAGAGTTGACAGCCAAGAACAAGTCAGGGCCTTTGGACTTACAGCCCCAAGTAAATGAATTCTGATTGGATGTGCTTAAGAGAAGATATATTCCCAGCTGAGCCAGATGAAAATGCAGTTCATAAACTTGTTTGCAACCCTGCTACATCTTGAGCAGAGAACCCAGTCCTGTATCAGGATGCCAGACCAACAGAAACTAAGAGGAATGGCACGGGGCCCTTCCACTGCAGCATGAGGCTGTACATAGGAGAACTCCCCTGCATTGGCTGCCGAGAGATCCCTGCAGGCCATGAGGAATCAGCACCCACTACAGAAGCTGATCATGCTTTGTCTATCTCTGTGAGAGCTGGAAACACCCTCCACTTTGCCTGATGTCTTGGAGTAGGCATTTCATTGGCTACAAACTACCACTTTCTCAATACATGTGATTAAGTATGAAAAGAGGGAAAGGAACAAAGAGATGATAGCTGAGATTCTGGATTCTGCAGCTGCAAGCAATACGAATGCATGCTACACGCAGACACCATGACACGCATTACTGAAATTCTGCAGAAAGAATGGCATAAACATCATTTCCCTTAAAACGCTTTTTCTTTAAAAAGTAGTTCAGAAATGAACAGTGTCCCCTTTGTTTTCTTATTAAAGAATATACTGAATTTGTCTTTGATAGATTTGCCCCCTTGTGGTTCTATTCTTTCTAATTGAGTTTTTCTGACTATGACTTTGTAACTGAAGTTTTGAAGCCAGAAGCAGCAAAGGACAGAATAAGAAAACAAACTAACATTCCATCTGTTGTGACATTTAGTATTAATTTTCCTAAGAAACTGTTTATTGAATCAACTTCGTATCAGCATTAAGAACTTGAAATCTTAGTTCACATGATAGACACGCATGTCTATTTCCGTTGATTCTCGAATTCATCTGCCTTTTTAAATACCTGAACTGCTCTTCCTTGCTGCATGTGTGTGCCATTGGATGAGTTTTTCTATTTTTTGCTTTTTATTGAAGTATCCCTGGTTTGCAATATTGTGTTAATTTCTGATATACAGTAAAGGGATTCAGTTTATACACACACACACACACACACATACACATACATGTATATACTTATTCAAATTCTTTCCCATTATAGATTATTCAGTTCAGTTCAGTCACTCAGTCATGTCCGACTCTTTGCAACCCCATGAATTGCAGCACGCCAAGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACCAAAACCATGTCCATCGAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGCTTCAGCTTTACAATCATTCCTTCGAAAGAAATCCCAGGGCTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTATAAGATACTGAATATACTTCTTGTACTACACAGTAGAATCTCGTTTTCTATTTTATATATATAGTAG TCONS_00202893 r 3' 41839 TCONS_00202893 r 3' 43078 EMBV3_35173 GACCCCCAAATGCCGCACGCTGCCCCTCTATTGCATGAGAATTTTTGCGCCTAATCATGT Gene GeneID:504425|LOC504425:XM_002691002:313_cdna Constitutive 0 NULL GeneID:504425 10 GENE LOC504425 NULL similar to ribosomal protein L18a EMBV3_09108 AGCCCAGGAGAATTTGTTGAAGGAGGACTAGATTTTCTTAGCATTTGCCATGATTTCAAC Gene BVV0102_396410 + 1 EMBV3_40403 GK000003.2:59033224-59081327 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24281 TCGGGAGATGACAAAGGAGATTTGGCTTGGGTGACTGGATAGTGATGCCTTCCACAGAAG Gene GeneID:615847|FAM33A:NM_001038579:51_cdna Constitutive 1 NULL GeneID:615847 19 GENE FAM33A MGC133702 SKA2 family with sequence similarity 33, member A EMBV3_04318 GAGCTCGACTTCAAGCACATGATGCAGAACTACCTGCGCCAGCAGATCCTGTTCTACCAG Gene GeneID:511561|SNX33:XM_002696629:164_cdna Constitutive 0 NULL GeneID:511561 21 GENE SNX33 SH3PX3 sorting nexin 33 EMBV3_00989 GTGATGCTTCAGAAGTTTTGTAGCTTTGGCGTGAGGGACACAGACTGAACAGCTGACTCC Gene GeneID:615982|LOC615982:XM_002707786:583_cdna Constitutive 0 NULL GeneID:615982 24 GENE LOC615982 NULL similar to PH domain leucine-rich repeat-containing protein phosphatase (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory protein) (hSCOP) ( EMBV3_37859 TCCCACTAGAAACCACGTTTTCCCAAGAGATAAGCTATGTTCACTAAAGACTCCTCCAGC Gene BVV0102_249614 + 0 NULL GK000010.2:85740100-85743346 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018239 TCONS_00018241 TCONS_00018246 TCONS_00015175 TCONS_00018250 TCONS_00018243 TCONS_00018237 TCONS_00018245 TCONS_00018238 TCONS_00018242 TCONS_00018244 TCONS_00015173 TCONS_00018240 TCONS_00015172 TCONS_00018249 TCONS_00018248 TCONS_00018247 TCONS_00015174 2 XLOC_009206 XLOC_008427 Coding TCONS_00018239 XLOC_009206 Coding Coding ENTPD5 10:85740071-85759039 j TSS12300 5193 1 TCONS_00018239_2 391 0.116695551704217 15 0.726999525491643 0.000915827638028323 0.00131475006256559 0.00158266968947515 0.000906727728143902 1.35263409739354e-09 1.42445884861361e-07 0.000427336874903053 2.34612774471593e-08 0.000601615177418256 6.97682316808685e-08 2.06783081377724e-08 0.000132405984669435 4.17900517749265e-07 0.00109118691187911 0.000902413199588123 0.000833714815679069 0.000218566432011071 1.52109485033851e-06 0.000980382811941774 0.00277717788222183 0.00133283263913424 3.08104962582548e-08 1.15554091891559e-32 0.000156351675239953 0.00321225426981766 0.00094254190271472 1.40408217474001e-05 0.000209075265538617 1.01052831229794e-07 7.40505101711004e-05 XM_005211989.1 ENTPD5 PREDICTED: Bos taurus ectonucleoside triphosphate diphosphohydrolase 5 (ENTPD5), transcript variant X1, mRNA. 0.0 8960 100.00 0.956479876757173 NM_001249.2 ENTPD5 Homo sapiens ectonucleoside triphosphate diphosphohydrolase 5 (ENTPD5), mRNA. 0.0 1799 90.15 0.255536298863855 TCONS_00018239_2 sp|E1BPW0|ENTP5_BOVIN ENTP5_BOVIN Ectonucleoside triphosphate diphosphohydrolase 5; 0.0 797 98.99 0.997442455242967 1 coding 0 0 0 0 -0.0857618160161678 0.731892229855249 0.0238720310899871 0.716707653728044 AACAGTGAGAGCAAGGAATCACAGGGACTGGGCAGACATGAGCAGTTCTTCTGGTTGATCTACATGACCAGCCTGACTGCTGCAAAGGAAGAACCCACCAAAGGGAGTGACTGAAGACAGAGCAGCAGACTTGGTTTGAGGGCGTCTTCCTGTCTTCCATGTGCCCTGTCAACGTCAGCGCCGGCACCTTGTATGGAATTATGTTTGATGCAGGGAGCACTGGGACGCGAATTCACGTTTACACCTTCGTGCAGAAAGTACCAGGACAGCTTCCAGTTCTGGAAGGGGAAATTTTTGATTCTGTGAAGCCAGGCCTTTCTGCTTTTGTAGATCAACCTAAGCAGGGTGCTGAGACTGTTCAAGAACTCTTAGAGGTGGCCAAAGACTCAATCCCTCCAAGTCACTGGAAGAGAACGCCAGTGGTCCTGAAGGCAACAGCGGGGCTGCGCTTACTGCCAGAAGAGAAGGCTGAGGCGCTGCTCTTTGAGGTAAAAGAGATCTTCAAGAAATCACCTTTCCTGGTACCAGATGACAGTGTTAGCATCATGGATGGATCCTATGAAGGCATATTAGCTTGGGTTACTGTGAATTTTCTGACAGGTCAGCTGCACGGCCACAACCAGGAGACTGTGGGGACCCTGGACCTGGGAGGGGCCTCCACCCAAATCACGTTCCTGCCTCAGTTTGAGAAAACCCTGGAACAAACCCCTAGGGACTACCTCACTTCCTTTGAGATGTTTAACAGCACTTATAAGCTCTATACACATAGTTACTTGGGATTTGGATTGAAAGCTGCAAGACTAGCAACCCTGGGAGCCCTGGAGACGGCAGGAATTGATGGATACACTTTCCGAAGTGCCTGTCTGCCGAGATGGTTGGAAGCAGAGTGGATCTTTGGGGGTGTGAAATACCAGTACGGTGGCAATCAAGAAGGAGAGGTGGGCTTTGAGCCCTGCTATGCGGAAGTGCTGAGGGTGGTGCAAGGAAAACTTCATCAACCAGATGAGGTCCAGAGAGGCTCCTTCTACGCTTTCTCTTACTACTATGACCGAGCCGTGGACACAGACATGATTGATTATGAAAAAGGGGGTGTTTTAAAAGTTGAAGATTTTGAGAGAAAAGCAAGGGAAGTGTGTGATAACCTGGAAAACTTCACCTCAGGCAGTCCCTTCCTGTGCATGGATCTCAGTTACATCACAGCCTTGCTGAAGGACGGCTTTGGCTTTGCAAGCAGCACCGTCTTACAGCTCACGAAGAAAGTGAACAACATCGAGACCGGCTGGGCCTTGGGGGCCACCTTTCACCTGCTGCAGTCTCTGGGCATCTCCCACTAAGGCCACGCCATTCTTCTGAGGCCTGCATTTGCCAATATTTTTAAAGGGAGAACGAGAGAGGAAAGGATTCTGTTGTGTTCTGTGCTAGTCTGGGGGCCACCTGGACTGAAGCCCAGCAGCTGGTTTCACCAAGAGGAAGGGGCTTTTGTAGACAGGTCTTGCCCTTGGGTCTAGAGATTGGGGTTTAATTAATTTTAATTAATCAAATGTGAACTGTTTCCTAACCACTCTTCATGCACAGCTGGTACCAGAATCTAAATCTTTGAGGTTCCTTGTATATCAGAGAGCCAAAAGTAACAGCTTTGGAACTTAATCTTAGGGAACCCAGGGATGGAACCGTGGCAACCAAAGAAAAATCTCATTTCAGCCCTTTTAGTGCCTCATCCCTTTGAACATTTTAATTATCCTCTTAGATGTTAAACTGATGACAGTCCCATGACCTTTTGACACCGGTATTTTTCCTACACTTTGCCCTGTCCCACCTTTACTTCCACTCACCTGCCCTTAAAGAAAAAGGTTTTGCTTACCATGTGTAATTCAGAGAAAAACACCATACCTGAAGTTACACGATCCCACTTTGTGTTAGCGCCAACCCAGCCAGCTGAGAGCAGCCATTCTAAATCTCAGCAGGATGGAGAGCAACTCCTCATTGGCCAGAAGTGGGACATCCAGTTAAGAGGACACGTTTTGGGAGGGTGTGTCTGCCTTGTACAGACCACTTTTTAATCAACTTTTTATCAGTCAACCCTCGGATTAATGAACATATCCAATCTTATATAAGGAGTATGTGTGTGTTTCCTGTGCAAATACCTCCTCCTCCCCTTGTCTTTATATTGTCATCCTAAATTTAATTTCTTTGTATTTCTAATACAGCTATACCCCGGTTTCTGGTAAGAGGCCTGTGGGTGTGCTTTCCAAGGATCTAGATTTTGGTAATAGCCCCTTTCAGCTTGCACTTTTAGTCTTCATAGCAGTGTCTCTTTCTGCCCTGCCCCCTGATCATTTCAGCTAGCATCCTCTACATAGCTGTCTAGTCCCAGGGTTTCTGATACCCTTCCTGGTGAGACCTAACATTTGACTTGCTTGGCCATCTTGGCCCACATCCATATAGTGGATGCTCACTTTGAATATTCAGCATTCGATTCTGTGAATTATTTCCCCTGAAGTCCATTATCTTGTTCTCTCCCACATGACCGTCATTTGCTTGTCTACGCACTTGATTGTTCTTGGACTTGGAAGATCTTCCTGAAGTCTGGCTCTTTACCTCCAGCTTCCTTCCAGCAGAATTGTATCTCCACACGCTTGTAGCTTCCACAGTAGACTCAGCTTTTTCACATAAATACACTCGGCCCTCACACCACTTCCTGGGAAACCTTATTTTTAAAGATAGTCCATTGAGTCAAGAAATATTTAATATCTGATATGTGCAGATAAGTCCATTGAGTCAAGAAATATTTAATATCTGATATGCACAAATAAGTCCATTGAGTCAAGAAATATTTAATATCTGATATGTGCAAATAACTAGGCAAATTTCTATATACTTATCCCCCCAAATTTGTTTTTTCAATTCTATGTGGCATTTTTTCATTCTTCACACTAATGTTTAATTATACTGAGGTCACCTTTATACCTATTCTCTTCCTCCAAAAATGCTAAAGCAGAATGAAATAATAGAAACAGCTAAATAATGGAAATAATGGAAACAGCTAAAAAATGTAATCCAGTCTTCTACCCATTGCAGTCCCTTAATGCTTCTAACTCGTTATCACTCAGTTTCTGTTTAGGCATGTTCCCAGACAACTCATTCCACTTTGGGACTGCACTGATGTTAGAAAAAAAAATCCCTCCTCCATAGTCTTACTTCTGCTCTAATCTCTCCTTCCATAGTCTTTTGGGGCTTCCCTGGTGGCTCAGATGGTAAAGTGTCTGCCTGCAACGTGGGAGACCTGGGTTCCCCTGGGTCGGGAAGATCCCCTGGTGAAGGATATGGCAACCCACTCCAGTACTCTTGCCTGGAAAATTCCACGGACAGAGGAGCCTGATAGGCTACAGTCCATGGGGTCACAAAGAGTCAGATACAACTGCGCGACTTCACTTTCATTTGCATAGTCTTTTGGTGTTTTGAAGAAAACACCTTCTACATCCCTTACATTCTCTTTAACATACTACTTAACCTCTGGACCTTCCCATCTTGTCCAAAGAGAAGGCCGTTAGAACCAGTCTTCATACACTAAATGCAAGATTAGGGACAGGGAATCCCCTGGTGGTCCAGTGGTTAGGACTCCATGCTCTCACTGCCGAGGGCCCAGGTTCAGTTCCTGGTTTGAGAACTGAAATCCCATAAATTTCACTGGGGGAGACCATTTCCCACTAGAAACCACGTTTTCCCAAGAGATAAGCTATGTTCACTAAAGACTCCTCCAGCTTGATGGATTCAGAGGAGTAAGATTTCCTGGTCTTTTATCACCAGTTTATCTCTGGAACTTTTTTTATAAAGGCCACACATTGTTCAGCTGACTTCTTTAGTCATCCCAAATACTTTCAGAACTCTTGGGTAGACGCATTATAACTCCAGAAATGTAGCTACATATTTTCTGATAATCTTGATTAGAACATCTGGAGAATTAACCAGTTTATCCATTATAGGAACAATTTGGAATGAGAATTTTTATTTCTTACAAAAAAGTTTGTCTATTCTTTCTGCCGCTAGTATACTTTTTGGGCCTCTTACGAGAGGTCTTACAGGGTCTAGTATTGGTGATGAGGTTTCCTTTCTGTGAATATGTTATGTATTTCAAATACTTGGGACAAGGCCCGGCACACAGTGGATGTTGTGTGTGTGTTTTCAGCAAAACATCCTCTGTGGGTTATGGAGGTCCTTGCAAGGTGTGCCTTAAAATTCATGTCTTGCCTGATTTTGTTTGCGTACTTTTGTAGAGTCCATGTTCTTTTTACCTTTCCCTTTTCTTATGAAAGAGGACCTTTTTCCCCTACAGTGACCTTTCTGGACTTTGCCAGTAATCACCCAGCTTTTCCCAGAGCTGCCATCTTTCATTCTGGGCACATTTTTCCTGAGATTCCAGGAAGACTTGAAACATTCACGTTTTTACTCTAGGATCTTATAAATTTTCTGCATTTACCTGAAAAGCTCCCCTGTGGTAACACATTTCCCACTCCTTCAAAAATATTTCCCAAGAAAAGCTTACCTTGGGTCAAAAGCAGACCGTTATCTTCTTTCATTTTCAAATCAGACTTCTGAGCAAGATATTCTTTATGGCATACAAATCCAATGGATCCAAAAATCTCTTCGATAGGCATCTTGGGTACTGTGAGGTAAGCACTTCAAAACTGCAGAGTAAAGCAACCCGCCCCCTGCCCAGGTCTGCCAGCAGTCTGCAATCAAACATGAACAAATTCTGCTGCTATTCAGATTCTTTTCTTTTGACCTGGTTCCTGAGGTCTTTTAACCTGTGCAATGAAATTATTTATTGTTTTATGACAGAATACAGTGGTGTCCCACAGAGGAGCCATCGATGAAAAATGGTGCTGTGATAAGGAAGTAATAACTAGCATTTTAAAACTTGGTTTCCTTTTAAGAAAGTCTAATATACCTATAATAAAGGTTAAAGCAATTTGTCTTATTCTGCATTCTAGCATTATTAGTTTTAAAATAGCAGTTCTAACAAAAATGCATCAATTGACTTTCTAATTCTTGTCTATCAAAATAAACTATAAATTTACAACCAGCATTTTTTAAAAAGTTGTATAAATCTTCTTTTTCAAAAAAATTGTTAACAAGTAAAAATGAATGAGACGGCACCTTAGCAATTTTTGTTTTAAGTAATAAAAATTTATT EMBV3_26036 CCCCAGCAGCCAGGTCTGATGAGAGGTTTTGACCAAGTTGCAAACTCATACATCTCACAT Gene GeneID:100300267|LOC100300267:XM_002688169:88_cdna Constitutive 0 NULL GeneID:100300267 6 GENE LOC100300267 NULL hypothetical protein LOC100300267 EMBV3_41503 AGGGGGTGCCACGCACAAAGAAAATTAAGCAGGACCAGAAAAAAAAACTTCCTTTTCTTC Gene GeneID:100139116|SGIP1:XM_002686324:100_cdna Constitutive 3 NULL GeneID:100139116 3 GENE SGIP1 NULL SH3-domain GRB2-like (endophilin) interacting protein 1 EMBV3_41696 GATCCACCTTAACCACAGCTCAGGTCACCTCCTAAACTCTGTCCTGATGGGACTTCCTTT Gene GeneID:512897|RAD52:NM_001024525:16_cdna Constitutive 0 NULL GeneID:512897 5 GENE RAD52 NULL RAD52 homolog (S. cerevisiae) EMBV3_30403 ACGGTCTCCCAGCTGTAAGCAGTTTTGTGTCAGCATCCAGCATGGCTCCTTATCCTACCC Gene GeneID:540196|PAX9:XM_002696712:113_cdna Constitutive 0 NULL GeneID:540196 21 GENE PAX9 NULL paired box 9 EMBV3_17001 CAGCTGTTTTCCCCACATTGCACTTGACTGAAAGTCACGTGAGATTAAAGTGCCCCCTTC Gene BVT0101_005375 + 1 EMBV3_06537 GK000024.2:40366292-40384891 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138977 TCONS_00138976 TCONS_00138980 TCONS_00138979 TCONS_00138981 TCONS_00138982 1 XLOC_084780 Coding TCONS_00138981 XLOC_084780 Coding Coding ARHGAP28 24:40265833-40370288 j TSS104042 6370 1 TCONS_00138981_4 708 0.00753532182103611 19 0.939198115917054 7.58336505140759e-10 0 6.47616025594171e-08 7.89830732374057e-14 4.25039985850004e-11 1.93228641672634e-10 3.9597675398807e-10 3.130271747613e-09 1.11041511819606e-10 2.58020697059286e-05 2.89952767150684e-05 9.15621160246328e-06 2.8476920525447e-06 6.98259169544268e-11 1.58986505537105e-40 0.00297343518768221 0.000174362457700416 0.00166033250892689 2.36464176491769e-11 0 0 0.00166509370807816 0.00185548079335339 0.000299409798839882 4.05524898543069e-12 5.96415468972861e-13 6.15941023554773e-10 0.0001141860203646 1.17587267425546e-11 0.000297804666457946 XM_002697796.2 ARHGAP28 PREDICTED: Bos taurus Rho GTPase activating protein 28 (ARHGAP28), 0.0 9771 100.00 0.850392464678179 XM_005258144.1 ARHGAP28 PREDICTED: Homo sapiens Rho GTPase activating protein 28 (ARHGAP28), transcript variant X1, mRNA. 0.0 3458 74.32 0.84756671899529 TCONS_00138981_4 sp|Q9P2N2|RHG28_HUMAN RHG28_HUMAN Rho GTPase-activating protein 28; 0.0 1159 80.62 0.997175141242938 1 coding 0 0 1 1 -0.0207935035965186 0.873924877695045 -0.00713716640016768 0.884436243205207 CCTTTGTTTCTCGGGCCCGCAGAGCTGGAGGCAGCTGCGGGACAGGTCCTGGCTCCCACGTGGAGAGGGAGACAGAACTCTGCAGGTGGCGGGGTGCAGTGGGCCAGAGGATGGCCTCCCCATCCCTGGGCCATGAGGACACCGGGCCACAGAGATGTTTTGAGTGTCCATCTCCCTTGATAGCATTCGTGACCCTCTTAACCTGCTAAGAGAAAGTCCATCCCTCGCTGCCGAAGAATCAACAGGATGCTCTCCAATGAGTCCCTTCAGTCCCCGGCGTTCAGCCGCTCCAACTCTCAAGCCTCCGTAGACAGCGCCTCCATGGAGAATTTCTGGCGGGAAATAGAAAGCATCAAAGAGACCAGCCTCGGGGCTCAGGAGGAACAGACGCCTGCCGAGGCCAAGCCCCTGGACGAAGGAGAACTTGAAGCAGAGTGGTTGCAAGATGTTGGTTTATCAACCCTGATCTCGGGTGATGAGGAGGAAGATGGCAAAGCCTTGCTCTCTACTTTGACTCGAACCCAGGCAGCTGCAGTGAAGAAGAGATACAATACTTACACACAAACCTTGAGGAAAAAGAACAAGCAGTCTGTCAGGGATGTCAGAGACATCTTCGGAACCAGCGAATCTCCTCCAGATGAGTTTTGCTGTGTCCCAGCTCCTCTTCTGGATGTGAGCCCGGATGAAGAAAGGATGCCAACGGTCCCTTGCAGAAATGGTCAGCTGCCAGGTGATACCTGTGACAGCCACGCTAGCGAGCTGGATGGCGCCCGGGAGGGGAAAGCGCTGCCAGGAATCATCAAAGCCAGCGGCCCCTTGCCAGATGGTGCTTCTCTCAACAGTAGTACCCTGTCAGATGGGTCCCAGGATGAAGAATGGAGTTTTACTGTTCCCAGGAGTGGCTCCATGTCCATCCTGGAGGCCATTCCAGACGTGCCAGTTCATTCCAACGTCGCGGCAGACCCTGGACGGTCGGCGCGGAACGCTGCAAGTGATGATGAATATCTGGAAAAAAACATTCCGGTAGAAGCTGAAGAGCTGTCCTTTGAAGTATCATATTCAGAAAAGCTAACACAGGCTCCAAAAAGGAACAGATTTAAGAAGTTAGATTTTAAGAAAGAAGACTATGTTTTACCTAAATTTGTTGTTCAGAAAACCAGATTTGGCCTAACCAAAGCAGAAGATCTGTCTGCGGAAGACATGAAGAAAATCCGCCATCTCTCTCTGATTGAATTGACGGCCTTTTTTGATGCCTTTCGAATTCAGCTGAAAAGAAACAAAACAGAGAAAGTCAAAGGACGAGACAGTGGGATTTTTGGAGTTCCCCTCACAGTCCTGCTAGAAAATGACCGAAGGAAAGACTCTGGGGTCAAAGTTCCCCTTGTGTTACAAAAGTTCTTTGAGAAAGTTGAGGAATCGGGTCTGGAATCTGAAGGGATCTTTCGACTTTCAGGATGTACTGCCAAAGTCAAGCAATACCGTGAAGAACTGGATGCCAAGTTTAATGCTGACAAGTTTAAATGGGAGAAAATGTGCCATAGAGAAGCTGCAGTGATGCTGAAAGCCTTTTTCAGAGAACTGCCCACCTCTCTCTTTCCCGTGGAATATATACCTGCCTTCATCACTCTAATGGAAAGAGGGCCTCACATCCGAGTACAGTTTCAAGCCTTACACCTCATGGTCATGGCACTGCCTGATGCCAACAGGGACACAGCCCAGGCCCTCATGACATTCTTCAATAAAGTCATTGCCAATGAATCAAAAAATCGCATGAGTATATGGAACATTTCTACTGTCATGGCACCCAATCTTTTCTTCAGTAGAAGCAAACATTCTGACTGTGAAGAATTACTCTTAGCAAACACTGCTGCCCACATCATCCGTCTGATGCTCAAGTACCAGGAGATGTTGTGGACGGTTCCGTCTTTCTTAATCTCTCAAGTCAGAAGAATGAATGAAGCCACCATGTTGTTAAAGAAGCCGCTCCCAAGTGTCAAAAAGCTGCTAAGGAGGAAGACCATAGAACGAGGGGTTACAAGCCCCAAGACATCAAAGGTACTGCAAAAATCACCCTCTACAAGAAGAATGTCCGACGTGCCAGAGGGCGTCATAAGGGTCCACGCGCCCCTTCTCTCCAAGGTGTCCATGGCCATTCAACTCAACAGTCAAACCAAAGTCAAAGACATCCTGGCAAAATTTCAATGTGAGAACAGTCATGGTTCATCGGAATGCATTAAGATCCAGAACCAAAGGTTATATGAAATTGGAGGTAATATAGGACAGCACTGCTTGGATCCGGATGCTTATATACTGGATGTTTATCATGTGAATCCCCAGGCAGAATGGGTGATTAAACCCCAACAGAGTGTTTGAAATCACCCCCCAAGATGGCAGCTATCATATATTACACGCCAAGGAGTCCTACATTCAGTAGGGAAAAAGCAAGCTTCCGACATGTCTGTCCCTAGACCCTCTCAGTGTTTCTCAGCCCAACTGGTGTCTCCCGGAATTGTCAGCATGAATCGTGGATGAGGAGCTGGTTGACCATCTGAGCTGAAGCCGTCTCATGGTGGTTCCTTGGTAAGAGTGAAGGAAAGAGGGTGTGATCCTTCCAGAAGAAAGGCCAGCATAGAATATGGAGCTCTCATCATTTCTGATACTTTGACTCACAACAGAAATGAGCTTGGTCTTTATACCTGGGGATAAGAGGCACTTCTCGACGTAGCAAATGCTGCCAAACACAGGAGGTAGAAGAGACTTTTTTATACCTATGTTTTATATATATATATATAGAGACCTTTTTGAATAAGAATGCAAGAAAAAAACACAAAAATTTCTTCTCTGAACAGTAATTTAGATCTCCTTTCCAAAGAGAATCTGTTTCCAAAGTCACACATACAATATTTATGCTCTGACTTGCTCCTGAATTGGAGGAGGAGGAACTTCTGTGTACAGCCCACTGTACTGTTCTGAATGCTGTACCGTGTTGTGACTGCCTGCTTTCTGGTGCAAGTGAACATTTCCCCATCATGGACTATTGAGAACGGATACTTTTAAAGCTTACTCTGTTACGAACACATAGTTAAGGTCAGGTTTACAAAGGATTTTCTTGTGCTTCCATAACCTTCGGTGTAGTCAGCAGTCCTGGAGCTTCTGTTTCTCATCATGATGATGGTGCTCAGTGAATAGCTCTCCATGTGCCAGGCCCAGATTGTCTTTCCTCCCCAAACAGATCGTTTTTTAAGTTTCATGACTGTAGATAATCACTTCTGCAGCCCCAGTGTTCAAATGCAGAACTGCCTTTATCCAACTGCTCTTTATCCAAGAGTGCCGAAAAACACCATTCTATCCAGACTTCCTATGCTATAAAAACAGATTTTGTTTGTGTTCATCCATCATAGACTTGGCCAGGCTCCATGGATTAGCATCAGGCTTTAGAATCAGATGCATGTTGGGTGACCTGAAAGCTGACTTGCTCCCAGAAGCCCACAGGGCCATTTTTCCAGGCCTGCAGTTGGTGAGAAAGCACAGTTCTCCACGATTCTGAGAGCAGATCTGACATGTGCTGAGAGGTCAGGGAGCCCTGCCTTTCCTCTGGGGACTGCAGCATGTAGAAACAGGGATAGAGGTCTCACTTATCCCACATGTGTGCTTTGGATTAGATCTACAGCTTGAGATTTTGACAAGCTTATGTGAGTTTTAATGAAATTTAACATCCAAATGACTCTCCTTTGCAGTTCAAACAACAGACAAAGTTGCTTACAAATGCAGAAAACACTTTATCTACTTGCATTGGTAGGTGGGTTCTTTACCACTAGTGCCACCTGGGAAGCCCTTTATCTACTTACCAAGTCTCAGAACATAATGTGATGATAATTTAAGCCTGTATTCTAGAAGAAATCTTTTCCATGCTCATTATGCCTTGATATCTATAAAACCTTGATTTATATGCAACGTTCCTGCCCATTGGAGCTGTGTTACATTTTTGTGGAAAGCTAATATCCATTCATTTTGTTTATTTGAGAGTTTTTATTTCCTTTGCTTGAAAACCCAGTGGAAGAAAAACATGCATTCTGTTGGTTTATATTTATTCCTATATTTCATCAGTTTTCAATGTATGGCTAATTGACAGCGTGTGAGTTTGCATAATGAACTTTGAGGGTCTGAGAAAATGCAGTTATCATTCTTGCAGTTCAAACAACAGGAGTAAGCATTTTACTCCGTGTATTAGTTGCTAAGTTCCAAGACATAAGATGGCTGTAACTGATGCCCACATACAAGGAAGTTCTTCAAATTAGGTGCCTTACACTTCTGTGTATATATTAAAACAATGACTGATTTCTCTAACTGAATTTCCTCTCATTTAGAGTAAATTCTGTTGTGCTTAGAAAGTTCACCAACCTAGCCAATTTTTTATTTTTAATTTTGGAATTTTTATTTCTTTTGACTGAAAACACATTAGCACTGATGGAAGACTTCTAAAAGTTTTAAGATTTACCCCATTAAGTCATTAGTTTTAAATAAATGGCTAAAAAATGACAGTTAAAAAAATTAAGTTTCTGAATTTCTTATCCACATTTGATGTGGATAAGATGTGACGTCGTTTAGATGTCAAAGGCTCAGCCCAGTCAATAATCTTAAATTAATCACTGCCTTCAAGGATGTGTGACAACTTTAAAATAACTATATAATATGGAAGCCCATGTCAATACCAATATATTGGATGTAACTTGAATTCTTAGTCATACAATTAACTAATCAGAGAAGAATTTCCAGTAGACACAAACTAATTTTTGTGAGGTTAAAAAAGTTCTTTTTACTGATTTTATTACTTTTTTTAAAACTTGAGTTTATTCTTAGTGAATAAACAAACCCATACAACTAAAACTCAAAAATGGCAGTCACCTAAGTGTTGAAAAAACTATACTTGCCTTATGAAGAGTTGTTTTGGCAATAGTTACAGTCATCTGTAAAAATGAATAGTGTAAAGGCAAACATATGAATAGTGTATCTGCAAACAAAAGACAAGTCAGACCCTGGGCTTCTAAATTCTGTTCTTGGTAGCTTCCCCCTCACCTTGTCCCATGCGCTCTTCGTGTGCAGTTAGGAAAATGACATCTAGGAGAGCGTTAGAGAAAGTTAACGTTTTAGGAAGACTTATTCAGAAAAAAAACACTAGAACGCGCTCCTTCTTGCCTCCAGTCTACAAAAGAAGATCCCTTTGCTAAACAGCTCCCTTGAGGATATGATTCTACAGGTCACTGAACAATGAGTTCAGTGAGTTCAAGGGGAGATCTTTGAACAAACTGGAATATTAATCTCTTTACAATGTATATACAGTATAAACTACCTCACTTGTCTTTCCTTGGGGGGGGGAATGACGGACGTTAACAATTTTTGTTACAAATGGTCCCTGATCTTATTATTTAAGTCACTTCAGTTAGCTTTCAATGTACATTTAATAATATGCATTTAATGATGTAAAATATTTTTAGCAAAAGCTTTAAAACCAAAAATACTCTGTAACTGTGATGTGTGTTGTAGAGGCCGAGAGAATCTGTCCTTTAGTCATCGTCTTGTGTGTTTAACCCTGTGGAGTCACAGGTTTTCAAATGTAGGAATTCACTTCATCAAATTTCACGCATTTTCAGCTGTTTTCCCCACATTGCACTTGACTGAAAGTCACGTGAGATTAAAGTGCCCCTTCTTTCTATGAAACATATTTCAACTGTTTTTCATAAATGTATTACACATCTGAAAGGAATATATATTCTGGGACTCTAGTTTTCTATTTTCTGTCTGGCACTTTCAGCTGTTTTTTTTTTTTTTTCATAAACATGTCACTTAATAAAAAATAATATGACATGGATTAAAATGTTCAAACATTTTTCAACAGTTGTACACACACACACCACCTTAATTTAAAAATGACATCTTTTCTTTCAGGTATTTTCCAGCTGTTCTTGGAAATGATGTGATTTGATTGAAAAGTCATGTTGTCCCTAGGATGCCAATTTTTATGTTGTCTCCCATCTCAAGAGTTAATGTTCTTTCATCCCATCAGTTTCATTGCCAAGTATAATATGTATGTTGCATTTTATTCATAAAAATAAAGAGGAAAAAACCAAAAGCATCATCATGAGATGTCTTATGTTCAACTAGTCCGAAGACACCATGGTGCGCTGGTGAAAGAAAAGGAGCCTTACAGTCAGAAGGTTTGTGTTTTGAGCCCAGTCTTTGCCATCTATCATAAATGGTGATGTTATAGGCACTGGGGTAATGGTGGATGTTTGTGCAAAGCTATTTACTAAACTTGTTTGAGTTAGTGCCTTTTAATATGTGCTTTTGAAAATATATATATAGTTTCAAT EMBV3_05184 GGCCATCAGCAAGAAGTTTGGAGACATGAGACGAAAGTAGGTGGTGCGAACCACGGCGGC Variant GeneID:534629|TPD52L1:NM_001076033:15_cdna 730^844 2 EMBV3_17383 GeneID:534629 9 GENE TPD52L1 NULL tumor protein D52-like 1 EMBV3_04097 CGGGCCCTTGCTGCCTTGCGAACAGAATAAAGGAGGAAGATGAATGAGAAGGAGGAGTGT Gene BVT0102_113707 + 0 NULL GK000025.2:34356207-34393879 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146953 TCONS_00146956 TCONS_00146963 TCONS_00146966 TCONS_00146959 TCONS_00146960 TCONS_00146975 TCONS_00146968 TCONS_00146954 TCONS_00146969 TCONS_00146955 TCONS_00146967 TCONS_00146965 TCONS_00146957 TCONS_00146970 TCONS_00146964 TCONS_00146971 TCONS_00146974 TCONS_00146961 TCONS_00146958 TCONS_00146972 TCONS_00146973 TCONS_00146962 1 XLOC_089257 Coding TCONS_00146953 XLOC_089257 Coding Coding HIP1 25:34388649-34412484 j TSS109755 6477 1 TCONS_00146953_2 457 0.0775050177551335 17 0.728958630527817 7.02209948552887e-23 3.34840294820123e-20 2.0525860861153e-12 8.01517134352642e-50 0.000218629386068137 9.60984290845055e-05 0.000303360059916705 1.41835022968984e-33 7.69748065823747e-26 0.00051688812570277 0.000384122296120374 8.65240992271302e-05 0.000108267530443081 0.00198599930779253 4.99380421553091e-14 0.00444527644512469 0.00415835401629693 0.0140321084623657 1.17292552126307e-73 8.66103046509606e-162 0.00142944755949496 0.00364971231934029 0.000437233340315436 2.9261959987384e-48 4.14058631251019e-101 1.04875306593627e-16 1.31397989256344e-129 2.27937438488229e-05 0.000401517827593859 0.00170819631157769 XM_005225025.1 HIP1 PREDICTED: Bos taurus huntingtin interacting protein 1 (HIP1), 0.0 9012 99.98 0.771807935772734 NM_005338.6 HIP1 Homo sapiens huntingtin interacting protein 1 (HIP1), transcript 0.0 1748 84.75 0.241778601204261 TCONS_00146953_2 sp|O00291|HIP1_HUMAN HIP1_HUMAN Huntingtin-interacting protein 1; 0.0 778 84.25 0.99781181619256 1 coding 0 0 0 0 -0.521512699395699 0.116184699774256 -0.10036290071791 0.15011260435737 GTGGAGTTGGCATTAGACGGCAGGTTCCGTTGGCATAAGAGATGGCAGACTCAAGAACAGACAGAAGTACTAGAGAATTTGAAGCAAGAACTTGCCACCAGCAAACAGGAACTCCAGATTGTCCAAGGCAGCCTGGAAAATTCTGCCCAGTCGGAGGCAAAGTGGACTGCCCAGATCACAGACCTGGAGAAGGACCGGGACAGCCTGATGAGCGCCATGGCTTGTCGGGAGGAGGAGCTGTCCGCTCTTCGGGAGCAGCTGGAGTACACGCAGCTCAAACTGTCCAGCGCACAGGAATCTATATGCCGGCTCGAGAAGGATCAACACAAGATGCTTCTGGCCGAGGCGAGGAGGGCTGCAGAGCAGGTGGTGCAAGAGGCCCTGAGGCTGTTTGAGGAGCCCACTCTCTCAAGCTGCGCTGGATCTGCAGATCATCTGCTGTCCAAGGTCAACTCCACTTCCAGCTGCATTGAGCAGCTGGAAAAATGCTGGAGCCAGTACCTGGCGTGCCCGGAAGATATCAGTGGGCTCCTCCACTCCGTAACACTCCTGGCCCACCTGACCAGTGACACCATCGTTCACGGCAGCGCCACCTGCCTTAGAGCCCCGCCGGAGTCGGCCGACTCTCTGATTGACGCCTGTAAGCAGTACGGCAAGGAGACCCTCACCTATCTGTCTTTCCTGGAGGAAGAAAGAATCTTCGAGAATGCCGACAGCACAGCCATGAGAAGCTGCCTCACCAGGATCACAGCCATTAGCGAAGATCTCCTGCCCAGAGGCCTGGACATCAAACAGGAGGAACTGGGGGACCTGGTGGACAAGGAGATGGCTGCCACTTCCGCTGCCATTGAAGCCGCTACGGCCAGAATAGAGGAGATGCTCAGCAAATCCCGAGCTGGAGACACAGGAGTCAAATTGGAGGTGAACGAAAGAATCCTTGGTTCCTGTACCAGCCTAATGCAGGCCATTCAGATCCTGGTCCTGGCTTCGAAGGAGCTGCAGAGAGAGATAGTGGAGAGTGGCCGGGGTACAGCATCCCCTAAAGAGTTTTATGCCAAGAATTCTCGATGGACAGAAGGACTTATCTCAGCCGCCAAAGCTGTGGGCTGGGGAGCCACTGTCCTGGTAGACGCAGCTGATATGGTGGTGCAAGGCCGAGGGAAGTTTGAGGAGCTCATGGTGTGTTCACGTGAGATCGCTGCGAGCACCGCCCAGCTTGTAGCCGCCTCCAAGGTGAAAGCTGATAAGAACAGCCCAAACCTGGCTCAGCTGCTGCAGGCCTCTCGGGCCGTAAACCAGGCCACTGCCGAGGTTGTGGCCTCAACTATTTCCGGCAAATCACAGATCGAGGACACAGACAGCATGGACTTCTCAAGCATTACGCTGACCCAGATCAAACGGCAGGAGATGGATTCCCAGGTTAGGGTGCTAGAGCTGGAAAATGAACTGCAGAAGGAGCGTCAGAAACTGGGAGAGCTTCGGAAAAAGCACTACGAGCTGGCTGGGGTTGCCGAGGGCTGGGAGGAAGGAACCGAAGCACCACCATCTACACTGCAAGAAGCGAAAACCGAAAAGGAATAGAGTCACACCGATGCCCCACATGTCAGAGTTCTTTTCCGTTTCATCATTTGCACAAACTTGTGAGCACCAGAGGGCTGATGGATTCCAAACCGGGACCCGACCCTGAGTCTGCGCAGAGTCGGAAGTGGAGCAGAAGCGTCCTGGCAGAGAATGCCAAGGCTGTGTCCCCTCTTTGGGCAGTTCCATGGATTCCCACTGCTTCTTATGGTGGTTGGCTGGGTTGTTTTTTTCTTTTTTTTCCCCCAAGTTCTACTCACATAGCCAACTCTCCCAGGGGATACCCCTGAAGCCCTGGGCTATTGCGGGCCCCCTAACCACAGCAGCTCACAGCGACGGTGCTGACCAGGCTTCGCCGTGGTGCTCCCCGCCAGCCCCCGAGCCGAGTGTCCTGCTGAGCGAGTGTGGGTCCACTGAGGCCACTCCCCGGGGTTGAGCGGAAGGAGAGCGAGTGCCTTGCCTTCTAAAGCTGGAGCCCAGCCGAAAGCCTCTGCCCACCTTCACAAGGGAAGGGGATGACAGAGAGAGGGAGAGGAAGGATGCATACAGCCCAGGTCTTCAGGAGTCCCGCCCATCTTAGAAACTCCCTATGACTGGGCTAAAAAACCTTTACCCCATGCTTGAACCCAGCCGGTGAGAGTTGCCACACTTCCTGCCCCCCCACCCCCAAAGGAATGTTCCATGGTCCCTCAAGTTGGCACCTCCCTTCAGACATAGCCAGGGCCCTAAGGGGGAACATGTGAGGGGTTTCCAATCCCTTTCTGCCTTGGCATCCTCTTGAATCTCAAGGAGAGAGTTCCATGTTCTACCTAATCAATAGACCCAGAAGATCAGGCCATCTTGCTTCCAACAGGAAAGAACCCTGGGCTTGGTTTGGTACCTTGAATATTTATGACTAACCTCCGTTAGCAGCAGCAGCAATCGCAACCTACAAAAAAAAATGCTGGCAGCAACTGAGATTTCAGGTGTGACTATGGCAAGGCATGCATCACTGCCCTGGGACATCTGTCTTTAAGAGGCAGAAACAAGGTCAAGATCTGGTCTGTTACCAGTTTGGATCTCGAAGCAAGAAAGTTCTCAGAGAATCTGGGTCAGGGAAAACCAGAGGGGGGAGGGGACCCCTGGCTCCGACCCCTTCCAACCACACGTCCCGGGCCCTTGCTGCCTTGCGAACAGAATGAAGGAGGAAGATGAATGAGAAGGAGGAGCGTGAACAGTGTCCTGGAGACGGGCAGCTCGCCAGCACTTCACCTCCAGATGGACTCCGGAGTTTAAGTGACCTTCCCATCTTGGACAGATGATGTCTTCCTTCCTTTATCTGTAGCAGCTCATAGATTGTAGCCAACAAGCACGTCCCAGGACCTGTCCCCAAGGACCATAGCTGAGTGCGGCTACGTGACAGGTTGTGAGACCCCTGTTTGATCACTGTGAATCCACTCTCCTTCCTACCCACCCACCACCAACTCCCTCTCTCTCCGTTTTCTCAGGCACTTGAAGAGCTGCCTCCCATTAACTCAGATTATCAGACTCAAATGTGTGCTCTCCAAACTGGGCTAAAGAGGCGGCAGCCATAGAAACTGACCCGGTCTTATGTTGACTGCTTCTTTGTGCTCAGCTATGGATATTTTTCCATCCAAGGCTCAGATGGAATGATGTGTATGTAGCTTCCTTAGCCCCGCTGTACCAGTTAAGCCGATTGGTGTGTTCTCAGCGTGGGTCAGCATCCAAAGGTAGCTGGTCCTTGCTTCCAGCATCCCAGCCATTCAGATGATGTGCTCCAGATTACCAAGGGGCAGAAAATCTAGTGTATTGAGCCACATTAGGCTTCTCTAAATGACTCTCCCTCTAAAAAGCCACAGTAATTTTTAAAACTTGGACGAGCTTTTCCAGAGTAATAAAACAATTATGAAATTACTTACACAGGAACACAGGCTAGTTCAGTCTCCCATGAAGAAATATATGTCGGAATTGGTATAATTACTTTCATAATCACTTGACTTAGAAGCTAGCCCGTTCTCCAGCTGAAATCAAAATGTCGTACCTTGGCTGTTCTAAAAATGAGCGTGTTATTCTGGGTGTGAAACACCTTGATTAAACCATTAATCACATCCTAGGGCTAAAGATGAACCTCACAGTCTTTTAGTCACTGAGTAATATCATTCGTGACTGGAGTCTCATGGGTCAGTGTAAGTGGGTCACAGCAAGGCAGGACAACAACAGAGATGGCTTAGGGCTGACGAGAGGTCGAAATAGAGCTGTATCCATCATCTTAATTCTGTGACACAGTGTCTCTCATCTCTAGAATTAGGATATGAGTGCACCCGATAAGGGAAAAAAAAATCAAAAGACCTGCTTTTGTGGGGTTAAATCTGTATCTGAGCGCGGAGTGTAAGGGAGACTCGAATTTAGATTGTTTGCTAATTCTGCTGCACACGGGAGGATCCCTGGGATCCCACCTGATTTTGAGTCCCTAGCCCAGTGGCTGGAAGAACCACTGCCCAGAGCATCCTTTCTTGGAAGTGTCTGAGCTGCCAAGGCAGACAACAGGCTTTACACTGGGTACCGTGGGGGTCACGAGCACGTGTCAGTCCGGTTGGTTTGCTTCTGCCTCCTGCTAAGGAGCTGGTTCTGAGCTCGCACCTGGCTGGTGCCTGCTTCTTAGCCAGCTCCTTAGTCTAGAGGGGTCTCCTGGCTCCACTTACCTTGGTCTTTAATGAGTGGTGAAGTTCTTGCTACCTTCTGCCACCGTTCCATGGTCTCTGGAAATCCTTCCCACCAATGAAAGCCTTCGGTCCTGGCATTGGCCTTCCACCTAGACCGGCTTTGCCCTCTCTCTGCCATCCTCGGTCCTCCAGAGACCACACTGCCTGTCACAAAGAAAACCACCACCTCGGGCCTGCCAGCCATCAACTTGGAAAATCGGGCCAGCTGTCTGCTGCTCACGTCTCCCAGGTCCAGACCAAACGGGATCAACAACCCACAGTGGTGACTCAGTCTCTTACCCCAGGAGCCAAAGCAACACAAAACAATTGGTCAAACATCGTTGGGTCCGATTCTGAGAGTAGGTGATTTCTAGACATGTCTTTCAGGTGACCCTCAACTACCTCAGGTTTGAAGGCCCTAAATTAAGCTGATACTACTCATGGGGACAGACCGAGGAGGGTTCGGAGAAATCTTGGTGATAACGCACTTGTCTCAAACTTACAACAAACTCTCACGTTTCGGTTTGCAGGGGTGGGGTTGGGTTTGTTTTTCTTCTGTTTTTAACCTTTCCCCCCAATTTTCCATTAGAATAGTTCCTACAAATGAATTTCATTTCTCACTGAGTGCCTACCTTCCCAGGGCAGGTAGCCACTGGCTTTGTTTCCTTCCAGCAGTACTTTTATTATGGGTATTAAGACTTTTCTTTGTATAATACATTGCATCTGTGTTTTCAATTTTTCAATAAATACTTCAACCTGGCAATGGAGAGTATTGATAACTGACCAACCAAACTGGTTTTGAGATCTGGAATTCCAATGAAAAGCCGCCATTCACATCCCAAGGTTCACTGACGCATACAACGATCACATTTCCTTTGCTCCTTTATTTATTTATTGGCTGTGCTGGGTCTTTATTGCTGCCCGCGGGCTTTCTCCAGTTACAGCGAGCAGGGGCTATTCTCTAATTGCAGTGTGCAGGCTTCTCAATGCAGCGGCTTCTGGTTGCAGAGCACAGGCTCTAGAGTATATGGGCTTTAGTAGTTAGGGCACACTGGCTTAGTTGCCCCACAGTATGTGGAATCTTCCCCGACCAGAAATCAAACCTGTGCCCCCTGCATTGACAGGCAGATTCTTAACCATTGGACCACCAGGGAAGTCTTCCTTTGCTACTTTAGAGAAAAGAGACTTTAATTCGCACCCCTTAGAACTTTTCCATCCTCTCTCTGCTCTCTTGACCTTGGGAATGGTCAGAGAGCATCAAGTGTGCAATATAGTACTGGAATTTATTTGGAAGACCAGGTCTCTGCCTGAAATCTCGGGTCTCAAGCTATGGATATTTTTCTTCTTCATCCTAGGATAGGTTATGTTCAGGCTCTTCTGCCCATGGAATTTCCCAGGTAAGAATACTGGAGTGGAGTACCACTTCCTACTCCAGGGCATCTTCCCAACCCAGGGATCAAACTTGATTCTCATCTCCTGCAGCAGCAGGCAGATTCTTTACCATTAGCGCCACCTGGGAAACCCCTGTCCATCCTAAACCTGTGAAAATCATCTGCCATCTTAAAATTGCATGGGATGAATTCTGCTCAGGGCCAGAGCTGCCAGTCATAAGGGGATTGAGAGCAAGCCAGTCACAGCTACCAGAGGATTTACAGAGGGAGCTGACAGAATGGGACCGACTGCATGAGGACTTTCCTGTCTGTAACTTAATGCTGCCAGTGTATTAAGCCAAGGGGACCTATCAGGGAGGGAGGAAGATGGGGAAGACCTGGGGTCGGTAAGGAGGAGAATTGCCCAAGATGATTCATCAAGAACAGAGAGAAGGAAGCAAGTAGTTTTTGTGTTTAGTCAATCTGTCCAACTCTTGGCGACTCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGACAGGAGGGCAAAGAATCAGGATAAGAGGAGGAAAGTGGTGGAAGTGCACAGGGTGGGAGATGATCTGGATAAATACAGAGGGACCCTTGCCTATGAATGTTTTGTGGTTTTTGCTGCATTTTTGCAGCATTTGCATGCTGGTGGCCACACAGTGTGGCCAAAAATTTTAAAACAAAGCCAGTGAGGCTTAATCTTGCTCACCATGGTTGTCATCAGCCTCTAATACATTACCCAATGTAAGTTTAAGCATTATGGAGTGAATGAACTCTCTTTTTATACCACTCT EMBV3_20752 TGCCTGGCAGTGTCCCGTAGTCTGATTTGGGGGTTTGCCCTTCACAGGGCCAGATTTTCT Gene GeneID:525741|CAMKV:NM_001075876:211_cdna Constitutive 0 NULL GeneID:525741 22 GENE CAMKV MGC142730 CaM kinase-like vesicle-associated EMBV3_06013 CGAGCCATGGTAGGGGAATCTGGCCTCGAGACGTGTTGAAGAAGGTCTCTCGAGGTCTTT Gene BVV0102_307634 + 0 NULL GK000020.2:2986575-3000669 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063808 TCONS_00162571 TCONS_00054133 TCONS_00142473 TCONS_00162568 TCONS_00010832 TCONS_00231771 TCONS_00218950 TCONS_00131534 TCONS_00186556 TCONS_00117596 TCONS_00240372 TCONS_00167122 TCONS_00210949 TCONS_00255144 TCONS_00231774 TCONS_00063807 TCONS_00186493 TCONS_00186490 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00149043 TCONS_00033204 TCONS_00131535 TCONS_00149042 TCONS_00231768 TCONS_00186557 TCONS_00217532 TCONS_00158314 TCONS_00230833 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00230828 TCONS_00178734 37 XLOC_038534 XLOC_099452 XLOC_031942 XLOC_086898 XLOC_099449 XLOC_006383 XLOC_141259 XLOC_132269 XLOC_080239 XLOC_112608 XLOC_071762 XLOC_147036 XLOC_101958 XLOC_129459 XLOC_158076 XLOC_141262 XLOC_038533 XLOC_112545 XLOC_112542 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_090920 XLOC_019438 XLOC_080240 XLOC_090919 XLOC_141256 XLOC_112609 XLOC_131531 XLOC_096768 XLOC_140323 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_140318 XLOC_108507 NonCoding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_06929 GCTTCTAGAGACCTTCCTTTTAGGTTGTACAGACGACCTTCCCTTTAGATGACCAAGTGC Gene GeneID:100140050|ITGAE:XM_002695790:316_cdna Constitutive 0 NULL GeneID:100140050 19 GENE ITGAE NULL integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) EMBV3_41354 TTCCGGGACCTCGGCCGCCTCATGACGCTTTACCTGTTTGCCAACAACCTCTCCGCGTTG Gene GeneID:100299284|LOC100299284:XM_002694660:192_cdna Constitutive 0 NULL GeneID:100299284 17 GENE LOC100299284 NULL similar to reticulon 4 receptor EMBV3_40611 ACTACAGCGTGTCTGCTGCTATGGCTGCTGTGCCAGTCAGGAGAGTATAAATGTGTCTGC Gene BVV0102_146933 + 0 NULL GK000003.2:73263915-74448728 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173702 TCONS_00173707 TCONS_00173701 TCONS_00173703 TCONS_00173700 TCONS_00173706 TCONS_00173704 TCONS_00173705 1 XLOC_104420 NonCoding TCONS_00173703 XLOC_104420 NonCoding NonCoding - 3:74229129-74297627 - TSS129065 243 2 TCONS_00173703_2 63 0.872427983539095 2 0.996481597734207 0.00642353199720374 0.00178973049403057 0.00411858972799188 0.00305341840630273 0.00100914491186099 2.42981775029489e-09 0.00204357374891009 0.00248105536849817 5.32176297975091e-05 0 0 0 0 0 2.5863469775611e-09 0 0 0 0.00581284039095306 0.0119755953099317 0.00129206605307866 0 0 0 0.00322770780132201 0.00466858893483261 0.00581663380298012 0 0 0 XR_235824.1 CEP57L1 PREDICTED: Bos taurus centrosomal protein 57kDa-like 1 (CEP57L1), 5e-29 131 78.62 0.650205761316872 0 noncoding 1 0 1 1 -1.06795118694347 0.0288673742376086 -0.00742755437622357 0.873070899299305 GGCTGCGTTATGGCTGCTTTATGGCTGTGTCTGCTGGGTCAGCCACGAGAGGAGAGACTACAGCGTGTCTGCTGCTATGGCTGCTGTGCCAGTCAGGAGAGTATAAATGTGTCTGCAGTTCCTACCACTCCTTGGAGTTTTCTTCCAGCTTTCCTGCTCACGCCTTGCCTACCATGGGTTCAACAAACAGTGTGAACAGTAAGATACAGTGAGACAAAAGCCACTTTTGTGCCATATTGCTGC TCONS_00170257 r 3' 81917 TCONS_00170257 r 3' 81939 EMBV3_20713 TCCGGAGAGGCAGAGGCGAGGGCTAAGCCTGACCAAGTGACAAAGCGCAAGAAAGGTTGT Gene GeneID:100295228|LOC100295228:XM_002696117:214_cdna Constitutive 0 NULL GeneID:100295228 19 GENE LOC100295228 NULL hypothetical protein LOC100295228 EMBV3_12331 TCTTCTCGCGCAGCCAGGTGTACCAGCTCGAATCCACCTTCGACATGAAGCGCTACCTGA Gene GeneID:525631|HMX2:XM_002698562:78_cdna Constitutive 0 NULL GeneID:525631 26 GENE HMX2 NULL H6 family homeobox 2 EMBV3_09802 GTGTCTGCTCCCAGGAACCCCTTCCTTCACACGCCTCTTTTGAGGATGCAGAGTATTTCA Gene GeneID:508137|DNAJC11:NM_001045993:73_cdna Constitutive 1 NULL GeneID:508137 16 GENE DNAJC11 MGC134157 DnaJ (Hsp40) homolog, subfamily C, member 11 EMBV3_23698 TTTCGCAAGCACAAGCTGAAAGAAAGCACGGACGGGGTGCCCCAGAGGTCCCCAAATTAA Gene GeneID:790892|PARVG:NM_001083805:240_cdna Constitutive 3 NULL GeneID:790892 5 GENE PARVG MGC148449 parvin, gamma EMBV3_37512 GCCTGCAGCCTTCTGAAAGGAAACTGCAATCACAGAAAGTCAGACAAAATAAATTGGCAG Gene BVV0101_010121 + 0 NULL GK000030.2:102432272-102494993 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253083 1 XLOC_156024 NonCoding TCONS_00253083 XLOC_156024 NonCoding NonCoding - X:102465784-102466075 - TSS190304 291 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000315259118790931 0 0 0 0 0 0 0 XM_001788594.4 LOC538808 PREDICTED: Bos taurus kinesin family member 7-like (LOC538808), 2e-09 66.2 70.59 0.463917525773196 0 noncoding GGCTACAGTGCTGGGATGCCTCAGTACAAACAATCAACAGGTGAGGTATCATAGCCCCATCCATTAGCAGAAAGACTGCTTAAAGTCTTCTTGAGCACACAGCTTCCCAGGGAAAGCAACTGTTCACACAGCTCTGCCACCCGAGGAACAAAACTCAGCTTCATCCACCAGGGTGCAGACAGCAGAAGCAAGAAGAATTACAAGCCTGCAGCCTTCTGAAAGGAAACTGCAATCACAGAAAGTCAGACAAAATGAATTGGCAGAGGAATATGTCCCAGATGAAAGATCAAG TCONS_00245339 . 3' 33514 TCONS_00245339 . 3' 33804 EMBV3_18027 CGTCAAAGGAAGCTGGGGTAGTTGGTACTGGGGGCCATGTAGCTGCTTTTGTTACTCTAT Gene GeneID:614312|DVL2:XM_002695783:292_cdna Constitutive 0 NULL GeneID:614312 19 GENE DVL2 NULL dishevelled, dsh homolog 2 (Drosophila) EMBV3_09547 CCTGGTGTTTCTTGGGGGCAGTCAAGTCGGGGAAATCTACTGGGATAGGATCTTCATACA Gene GeneID:100336796|LOC100336796:XM_002694295:384_cdna UTR3_Alt 2 NULL GeneID:100336796 16 GENE LOC100336796 NULL hedgehog acyltransferase-like EMBV3_22132 CCTGCTACTGTTGCAACTTCCTCCAACTACTATTTGGGGCCCCTGGATCAGATATCCTCA Gene BVV0101_013557 - 1 EMBV3_12086 GK000009.2:6777135-7083343 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251625 TCONS_00246740 TCONS_00218428 TCONS_00175509 TCONS_00118459 TCONS_00220566 TCONS_00166913 TCONS_00118040 TCONS_00238581 TCONS_00210913 TCONS_00087260 TCONS_00087259 TCONS_00071091 TCONS_00252081 TCONS_00040258 TCONS_00176420 TCONS_00233473 TCONS_00110425 TCONS_00123823 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00211020 TCONS_00238380 TCONS_00118491 TCONS_00140862 TCONS_00167521 TCONS_00174807 TCONS_00115210 TCONS_00132066 TCONS_00251851 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00078426 TCONS_00174805 TCONS_00170890 TCONS_00171428 TCONS_00010280 TCONS_00205125 TCONS_00231489 TCONS_00174806 TCONS_00161822 TCONS_00125692 TCONS_00002600 TCONS_00207485 TCONS_00031759 TCONS_00006385 TCONS_00000529 TCONS_00198820 TCONS_00170891 TCONS_00103962 45 XLOC_154566 XLOC_151107 XLOC_131748 XLOC_105290 XLOC_072622 XLOC_133883 XLOC_101749 XLOC_072206 XLOC_145248 XLOC_129423 XLOC_052423 XLOC_042864 XLOC_155022 XLOC_024074 XLOC_106198 XLOC_142955 XLOC_066329 XLOC_075375 XLOC_104695 XLOC_129530 XLOC_145047 XLOC_072644 XLOC_085291 XLOC_102357 XLOC_069472 XLOC_080699 XLOC_154792 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_103679 XLOC_103815 XLOC_005831 XLOC_124587 XLOC_140978 XLOC_098707 XLOC_077234 XLOC_000643 XLOC_126001 XLOC_018004 XLOC_001948 XLOC_000141 XLOC_120473 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_35951 TTTCTTTCCATTTAGAAATGGATGCAAAAAGTCATAAATATGAACCTACATCTACCCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25272 GATGATAAAAAGAGAAAGTGGCCTCCAAGACCTAGAAAAGATACTCAATCCCGTCTTTGA Gene GeneID:281110|CYB5A:NM_174033:52_cdna Constitutive 2 NULL GeneID:281110 24 GENE CYB5A CYB5 MGC128769 CYB5 protein EMBV3_27544 TTCTGTTGAATCTGCGTTAATGGGTGAATGACTTGGGCAGAGAGAACTCAAGGTTGTTGG Gene BVT0102_069076 + 0 NULL GK000009.2:97460621-97466439 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35770 CATCATACCAGTATTCTCCCAGGAACTTACAAGAGGGGCTACACTTTGCCAAGGACCGTG Gene BVV0102_305048 + 1 EMBV3_06534 GK000024.2:58751842-58770278 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20390 AATGACAACTCCCCTCAGTGCATCACAGAACACCGCAGGCTTAAGGTCCCAGAGGATCTA Gene BVT0102_044254 + 0 NULL GK000007.2:64769031-64878193 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213945 1 XLOC_130582 Coding TCONS_00213945 XLOC_130582 Coding Coding FAT2 7:64773692-64778702 = TSS160152 3564 1 TCONS_00213945_6 1188 2 0.288880015971252 0.000481008541646209 8.7402144673195e-05 0.000576426993901599 3.72800667706021e-05 8.31174349311011e-05 9.73555777218582e-05 0.00034198301354558 6.80425214910982e-05 0.000487045014884626 0.000136226541372564 8.99229642487398e-06 9.02951569320972e-06 1.61014554993224e-06 1.31986098181675e-06 1.72399688687755e-05 0 0 0 0.000164987712573094 0.000897920775130274 0.000322823157522876 0 0 0 0.000730949754130381 0.000711663948054644 0.000471822936965156 5.12060559673222e-05 7.35544415856144e-05 3.37388044584135e-06 NM_001192572.1 FAT2 Bos taurus FAT tumor suppressor homolog 2 (Drosophila) (FAT2), 0.0 6428 100.00 0.999719416386083 NM_001447.2 FAT2 Homo sapiens FAT atypical cadherin 2 (FAT2), mRNA. 0.0 4336 86.88 0.999719416386083 TCONS_00213945_6 sp|Q9NYQ8|FAT2_HUMAN FAT2_HUMAN Protocadherin Fat 2; 0.0 2176 87.33 0.999158249158249 2 coding 0 0 0 0 -0.134039017295177 0.356083363566901 -0.00914419867973221 0.846974727601313 ATGATTATTGCCTCGTTGGGATTTGCCATTCTCTTGTTCCACTGTACAACTTGTGAGAACCCCCTCATCTCCTCAGCCTGGCACTTCACACACCCCCTATATAATGCAACCATCTATGAAAACTCTGCTCCCAAGACCTATGTGGAAAGCTCTGAGAAAATGGGCATCTACCTCATAAACCCCCAATGGGCAGTGAGGTACCGGATTATCTCTGGAGATGTGGCCAACGTGTTTAAAACAGAGGAGTATGTGGTGGGCAACTTCTGCTTTCTGAGAATAAGGACAAAGAGCAGCAACACGGCCCTTCTGAACAGGGAGGTGCGAGACAGCTATACCCTCATCATCCAAGCCACAGAGAAGACCCTGGAATTAGAAGCGCTGGCCCGCGTGGTGGTCCGCATCCTGGACCAGAATGACCTGAAGCCCCTCTTTTCCCCACCTTCATACCGGGTCACCATCTCTGAGGACATGCCCCTCAAGAGCCCCATCTGCAAGGTGAGTGCCACCGATGCAGACCTGGGCCAGAACGCCGAGTTCTATTATGCATTTAACACAAGGTCAGAGATGTTTGCCATCCACCCTACCAGCGGGGTGGTCACCTTGGCTGGGAAGCTCAACGTCACCTGGCGAGGGAAGCATGAGCTCCAGGTACTGGCTGTGGACCGCATGCGGAAGATCTCGGAGGGCAATGGATTTGGCAACTTGGCTGCACTCGTCATCCATGTAGAGCCTGCCCTCAGGAAGCCCCCAGCCATTTCCTCGGTGGTCTTGGATGCGCTTGACCGCAGCGAGGATGCCACCTACGCTACTGTCATGGTAGATGCAAACAGCTCAGGGGCGGACGTGGACTCGCTGGAGATTGTTGGTGGTGACCCTGGAAAGAACTTCAAAGCCATCAAATCTTATGCCCGGAGCAGTGAGTTCAGCGTGGTTTCTGTCAAAGACATCAACTGGATGGACCACCCTCATGGATTCAACCTCAGCCTGCAGGCCAGGGCTGGAAGCAGACCTTCCGTTTACTCCCAGATCAGGGGCTTTCACCTACCCCCTTCCAAACTGACTTCCCTGAAATTTGAGAAGGCCACATACAGAGTGCAGCTTAGTGAGTTTTCCCCCACTGGCAGCCGTGTGGTGATGGTGAAAGTAACCCCAGCCTTCCCCAACCTGAAGTATGTTCTAAAGCCATCCTCAGAGAGTGCAGCATTTAAACTGAATGCCCGCACGGGGCTGATCACCACCACAAAGCTCATGGACTTCCATGACCAAGCCCAGTACCAGCTGCGCATCAGAACCTCACCGGGCCTTGCCTCCACCACTGTGGTCATTGACATCATGGACTGTAACAATCATGCCCCAGTGTTCAACAGGTCCTCCTACGATGGCACTTTTGATGAGAACATCCCTCCAGGCACCAGTGTTCTGACTGTTACTGCCACAGACCAGGATCATGGAGAGAATGGATATATCACCTACTCCATCACTCGTCCAAATGCTGTCCCCTTTTCTATTGACCCTTACCTGGGGATCATCTCCACCTCCAAACCCATGGACTATGAGCTCATGAATAGAATTTACACTTTCCGGGTACGGGCATCAGATTGGGGATCCCCATTTCGCCAGGAAAAAGAAGTGTCTGTTTCTCTTAGGCTCAAGAATCTGAATGACAACAAGCCTATGTTTGAGGAAGTTAACTGCACTGGGTCTATCCACGAAGACTGGCCAGTAGGAAAATCAGTAATGACTGTGTCAGCTATAGATGTGGATGAGCTTCTGAACCTAAAATATGAGTTTGTATCAGGCAATGAACTTGAGTATTTTGATCTAAATCACTTCTCTGGCGTGATATCCCTGAAACGCTCTTTTAGGAACCGTACTACTGGTCAACCCATCAACTATTCCCTGAAAATTACAGCTTCGGATGGGAAAAATTATGCCTCACCCATGACTTTGAATGTTACTGTAGTGAAGGACCCTCATTTTGAGGTCCCTGTAAAGTGTGAGAAGACAGGGGTACTGACACATTTCACAAAGACCATCTTGCACTCTATTGGGCTTCAGAATCAGGAGTCCAATGATGAGGATTTCACTTCCTTAAGTGCATATCAGATCAATCATCATACCCCTCAGTTTGAGGACCACTTTCCACAGTCCATTGACATCCTTGAGAGTGCTCCTCTCAACACACCTCTAGCCCATCTGGCAGCCACTGACCCTGATGCTGGCTTTAATGGAAAACTGGTCTATGTGATTGCAGATGGCAATGAAGAGGGTTGCTTTGACATTGAGCTAGAAACAGGGCTGCTCACTGTAGCTGCCCCCTTAGACTATGAAGCCACCAGTTTCTACGTCCTCAATGTAACAGTATATGACCTGGGCACTCCCCAGAAGTCCTCCTGGAAGCTGCTGACAGTGAATGTGGAAGACTGGAATGACAACGCACCCAGATTTCCTCCTGGTGGGTACCAGGTAACAATCTCAGAAGACACAGAAGTTGGAACCACTGTTGCAGAGCTGAAAGCAAAAGATGTTGACTCAGAGGATAATGGGAGGGTTCGATACGTGCTGTTAAGCCCCACAGAGAAGTTCTCCCTCCATCCTCTCACTGGAGAAATGGTTGTCACAGGACACTTGGATCGGGAATCAGAACCTCGGTATATACTCAAGGTTGAGGCCAGGGACCAGCCCAGGAAGGGCCACCAGCTTTTCTCTGTCACTGACCTGATAATCACATTGGAAGATGTCAATGACAACTCCCCTCAGTGCATCACAGAACACCGCAGGCTTAAGGTCCCAGAGGATCTACCCCCAGCGACTATTCTAACATTTCTGGATGCCTCTGATCCCGACCTGGGCCCTGCGGGAGAAGTACAGTATGTCCTGTTGGATGATGCCCACGGGACCTTCCACGTGAACCCGATGACCGGGGCACTCAGTCTGGAGAAAGAGCTGGACTTTGAGAGGAGGGCTGGATATAACCTGAGCCTATGGGCCAGCGACAGTGGGAAGCCCCTGGCCCGCAGGACCCTCTGCCACGTGGAGGTGACCGTCCTGGATGTGAATGAGAATCTCCACCCTCCCCGCTTTGCCTCCTTTGTCCACCAGGGCCAGGTGCAGGAGAACAGCCCCTCAGGAACTTCAGTGATGGTAGTGGCCGCCCACGATGATGACACCGGCTTGGACGGGGAGCTCCAGTACTTCCTGCGCGGTGGCACCGGCCTTGCTGCCTTTAGCATCAACCAAGACACAGGAATGATTCAGACTCTGGCACCCCTGGACCGAGAATTTGCATCCTGTTACTGGCTGACGGTACTGGCAGTAGACAGGGGTTCCATCCCCCTCTCGTCTGTAACTGAAGTCTACATTGAGGTTTTGGATGTCAATGACAACCCACCCCAGATGTCCAGACCTGTGTTCTACCCCACCGTCCGGGAGGATGCGCCCCTGCACACCTCTGTGCTTCAGTTGGATGCCTGGGACCTGGACTCCAGCTCCAAGGGGAAACTGACCTTCAATATCACCAGCGGGAACCATATGGGATTCTTTGTCCTTCATCCTCTCACAGGT EMBV3_00347 AGCCTGAACGCTGATAATGAGGACTACTCCAGCACTTCCAGGTGGAGGGAGACTGCCAGC Variant GeneID:786612|PJA1:XM_002700048:9_cdna 303^866 1 EMBV3_07000 GeneID:786612 X GENE PJA1 NULL praja ring finger 1 EMBV3_25914 TGATTCCATTTCACTGGAGTGTCTGCTTCACTTACTCTGAACTGTTCTCTTGTGTATGGG Gene GeneID:281477|SCG2:NM_174176:22_cdna Constitutive 0 NULL GeneID:281477 2 GENE SCG2 NULL secretogranin II (chromogranin C) EMBV3_17697 TGAGTTGCTAAAGTGAGCCTGGCTTTAGAGCTGCCTTGGGGTGTGGCGTGGGGGGCACAG Variant GeneID:535455|TEX264:NM_001038169:244_cdna 211^369 2 EMBV3_18071 GeneID:535455 22 GENE TEX264 MGC134080 testis expressed 264 EMBV3_19615 TACTCGGGCTTCAGTAGTTGGAGCACACAGGCTCAGTAGTGGTGGCACACTGGCTTAGTT Gene BVT0102_002645 + 0 NULL GK000007.2:12919315-12934834 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21096 TCTTCCCATCTCAGAATGTCCCTAACAGTCGGGCTACCGGAACTGACTTGGCCTTAAAGC Gene BVV0102_163208 - 1 EMBV3_37755 GK000019.2:42903082-42921866 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01460 TGACAGCCATGTCCCTCTTTTATAGGACTGTCTTTGTCATGTATGCCCAGCCGGGAGCTG Gene GeneID:789457|LOC789457:XM_002686611:117_cdna Constitutive 0 NULL GeneID:789457 3 GENE LOC789457 NULL similar to olfactory receptor Olr1353 EMBV3_09431 AAGCAAGTATGCGTGTTTGACCCCAGTAAAGAAGGGACCATAGAACAGCGGACCAGGAGA Gene GeneID:540246|KLHL15:XM_002700327:46_cdna Constitutive 0 NULL GeneID:540246 X GENE KLHL15 NULL kelch-like 15 (Drosophila) EMBV3_42446 CTTCTCCGGGACCAAATTCCACCTCTCTAAAAATTCCACAGAGAAGGTTCCAAGGCCAAG Gene GeneID:100138545|PML:XM_002696685:362_cdna Constitutive 0 NULL GeneID:100138545 21 GENE PML NULL promyelocytic leukemia EMBV3_28958 TAAGAGCAGGGACTTGGCTCTGACAGTGTGGGGCATGGAGATGGAAGACAGTAAGCACAA Gene BVV0102_252273 - 0 NULL GK000010.2:45432865-45438771 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017094 TCONS_00017093 1 XLOC_008967 Coding TCONS_00017093 XLOC_008967 Coding Coding ZNF609 10:45435444-45636954 j TSS11767 7468 1 TCONS_00017093_9 1411 10 0.96298924613789 2.32642928422508e-07 0.000423559335968029 0.000249298585971638 4.34176142604719e-07 4.85905427065851e-09 1.08535992407318e-08 1.62639419082388e-08 2.63758396603114e-07 1.2749305673498e-09 1.28842346231191e-08 1.59242169041955e-08 8.66825157067794e-09 8.28115623060359e-09 1.45298142076983e-08 3.29292967730971e-90 0.000593198776467799 1.60177333223427e-78 0.00228465497273926 2.13397534648281e-08 1.72108118516359e-14 8.27192072686793e-11 0.000239226014229702 8.86028639644867e-09 0.00108245687861173 1.65129671020387e-09 2.6442341302901e-09 3.59233309825732e-08 3.00947347285341e-08 0.000378273123767779 0.00107196866428414 XM_005211662.1 ZNF609 PREDICTED: Bos taurus zinc finger protein 609 (ZNF609), transcript 0.0 1.347e+04 100.00 0.999866095340118 NM_015042.1 ZNF609 Homo sapiens zinc finger protein 609 (ZNF609), mRNA. 0.0 8662 86.50 0.959292983395822 TCONS_00017093_9 sp|O15014|ZN609_HUMAN ZN609_HUMAN Zinc finger protein 609; 0.0 2604 97.31 0.999291282778171 0 coding 0 0 0 0 0.0363055645476644 0.806093671097789 -0.016625038494402 0.746623004392461 CCTGGGCCCCGTAGCAGCAGCGGCTCTACGGCCCGGGGCCCAGGCGGGCGGAGGTGGCGGCTCCCGGGACCGGCCGCGCGCAATGATGTTGTCCACTGGGCATGTACTGACCAATGTGGCAGGTCTGAGAACGTAGCTGAAGCTGAAACTAGGAAAGCTGGGGGCAAGGAAGAGCCTTGAATCTTGAGGTGGGACGTTGACTCTAAGATGTCCTTGAGCAGTGGAGCCTCCGGAGGGAAAGGAGTGGATGCAAACCCGGTTGAGACATACGACAGTGGGGATGAATGGGACATTGGAGTAGGGAATCTCATCATTGACCTGGACGCCGATCTGGAAAAGGACCAGCAGAAACTGGAAATGTCAGGCTCAAAGGAGGTGGGGATACCAGCTCCCAATGCTGTTGCCACACTGCCAGACAACATCAAGTTTGTGACCCCAGTGCCAGGTCCTCAAGGAAAGGAAGGCAAATCCAAATCCAAAAGGAATAAGAGTGGCAAAGACACTAGCAAACCCACTCCAGGGACGTCCCTGTTCACTCCGAGTGAGGGGGCAGCTAGCAAGAAAGAGGTACAGGGACGCTCAGGAGATGGTGCCAATGCAGGAAGCCTGGTTGCTGCTATTGCTCCCAAGGGCTCAGAGAAGGCGGCTAAGGCATCCCGCAGTGTAGCGGGCTCCAAAAAGGAGAAGGAGAACAGCTCGTCTAAGAGCAAGAAGGAGAGAAGCGAAGGAGTGGGGACTTGTGCAGAAAAGGATCCTGGGGTCCTCCAGCCAGTGCCCTTGGGAGGACGGGGTGGTCAGTATGATGGAAGTGCGGGGGTGGATCCAGGAGCTGTGGAGCCACTTGGGAGTATAGCTATTGAGCCTGGGGCAGCGCTCAACCCTTTGGGAGCTAAACCGGAGCCAGAGGAAGGGGAGAATGAGTGTCGCCCGCTAAAGAAAGTCAAGTCTGAAAAGATGGAGTCCCCTGTCTCCACACCGGCAGTGCTGCCACTGCACCTTTTGGTGCCAGTGGTCAGTAACGACATCTCATCCCCCTGTGAGCAGATCATGGTGCGCACCCGATCTGTTGGGGTCAACACATGTGATGTGGCTCTGGCCACAGAGCCTGAGTGCCTGGGCCCCTGCGAACCTGGGACAAGTGTCAACCTTGAGGGCATCGTGTGGCAGGAAACCGAAGACGGGATGTTAGTGGTGAATGTAACGTGGAGAAACAAGACTTACGTAGGTACACTTCTTGACTGCACACGGCATGATTGGGCACCCCCAAGGTTCTGTGACTCTCCCACCAGTGACTTGGAAATGCGCAATGGTCGGGGTAGAGGCAAACGCATGCGTCCCAACAGTAACACGCCTGTCAATGAGACAGCCACAGCCTCTGACAGCAAAGGGACCAGCAGCAGCAGCAAAACCCGAGCGGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAACATCGCCCACCTGCCAGTAGCACCTCCGAGGATGTCAAGGCCAGCCCTTCCTCAGCTAATAAGCGGAAAAACAAACCCCTTTCAGACATGGAGCTGAATTCTAGCTCAGAGGACTCCAAAGGGAGCAAACGTGTCCGTACGAATTCCATGGGCTCAGCCACTGGCCCCCTCCCTGGGACCAAGGTGGAACCCACTGTTCTAGACAGAAATTGTCCTTCCCCAGTCCTGATTGATTGTCCCCACCCTAACTGCAACAAAAAGTACAAGCACATCAATGGACTTAAGTACCACCAAGCTCATGCCCATACAGATGACGACAGCAAGCCAGAAGCAGACGGAGACAGTGAGTACGGAGAGGAGCCCGCCCTCCATGCAGATCTCGGGAGCTGCAATGGCGCATCTGTCTCACAGAAGGGTTCCCTATCCCCTGCCCGGTCAGCTACCCCCAAAGTTCGGCTCGTGGAGCCCCATAGCCCTTCTCCTTCAAGCAAATTCAGCACAAAAGGCCTCTGTAAGAAAAAGTTGAGTGGGGAAGGGGACACAGATCTTGGGGCCTTATCCAATGATGGCTCTGATGATGGACCCTCAGTAATGGATGAAACAAGCAATGATGCTTTTGATTCTTTGGAAAGAAAGTGTATGGAAAAGGAAAAATGTAAAAAGCCCTCTAGTTTGAAACCTGAAAAGATTCCTTCCAAAAGTTTAAAGTCAGCCCGGCCCATCGCCCCTGCCATTCCCCCACAGCAAATTTATACCTTCCAGACAGCCACCTTCACGGCAGCAAGCCCAGGCTCCTCCTCAGGCTTGACCACCACTGTGGTCCAGGCCATGCCCAACAGCCCCCAACTGAAGCCCATTCAGCCCAAGCCCACTGTGATGGGAGAACCTTTCACAGTCAACCCTGCCTTGACTCCAGCCAAGGACAAGAAAAAGAAAGAGAAAAAAAAGAAGGAATCTTCAAAAGAACTTGAAAGTCCTCTGACCCCTGGGAAGGTATGTCGAGCAGAAGAAGGCAAAAGCCCATTCAGGGAATCATCGGGAGATGGGATGAAAATGGAGGGCCTCCTGAATGGCTCCTCAGACCCCCACCAGAGCCGACTGGCCAGCATCAAGGCAGAAGCTGACAAGATCTACAGCTTCACAGACAATGCTCCCAGCCCTTCAATTGGAGGCAGTAGCCGCCTAGATAGCACTACCCCTACCCAGCCCATGACCCCGTTACACGTAGTGACCCAGAATGGAGCTGAAGCCAGCTCAGTCAAAACCAACAGCCCTGCATACTCTGACATTTCTGATGCTGGGGAGGATGGAGAGGGCAAAGTGGACAGCGTCAAATCCAAGGACCCTGAACAGCTGGTCAAGGAAGGGGCCAAGAAAACTCTCTTCCCCCCTCAGCCACAAAGCAAAGACTCACCATATTACCAAGGCTTTGAAAGTTACTACTCTCCAAGCTACGCACAGTCTAGCCCAGGGGCTCTGAACCCCAGCAGCCAGGCAGGAGTGGAGAGCCAGGCTCTGAAGACAAAAAAGGATGAGGAACCTGAGACCATAGAGGGAAAAGTGAAGAATGATGTCTGTGAAGAAAAGAAGCCTGAGCTGAGCAGTTCCAGCCAGCAGCCCTCCGTCATCCAGCAGCGTCCCAACATGTACATGCAGTCCCTGTACTACAACCAGTATGCCTACGTGCCGCCCTACGGCTACAGCGACCAGAGCTACCACACCCACCTCCTGAGCACCAACTCCGCTTACCGACAGCAGTACGAAGAGCAGCAGAAACGGCAGAGCTTGGAGCAGCAGCAGCGAGGACTGGACAAGAAGGCCGAGATGGGCCTGAAGGAGCGGGAGGCAGCCCTCAAGGAAGACTGGAAGCAAAAGCCGTCAATTCCACCAACTCTCACTAAGGCCCCCAGCCTCACGGACCTGGTGAAGTCAGGACCCAGCAAGGCGAAGGAGCCAGGGGCGGATCCTGCCAAGTCAGTCATTATTCCCAAGTTAGATGACTCCTCCAAACTCCCCAGCCAGGCCCCAGAAGGACTTAAAGTAAAGCTGAGTGAGGCCAGCCACCTAGGCAAGGAGACTTCTGAGGCCAAGACAGGTGCCGACTGTGGCCGACAGGCAGAGGTGGATCCAATACTCTGGTACCGACAGGAAGCAGAGCCCCGGATGTGGACGTATGTCTATCCTGCCAAGTACTCGGACATCAAGCCAGAGGATGAGCGGTGGAAAGAGGAGCGGGACCGCAAACTGAAGGAGGAAAGGAGTCGGAGTAAGGACTCTGTTCCCAAGGAGGATGGGAAGGAAAGCACAAGCAGTGACTGCAAGCTGCCCACATCAGAGGAACCCCGCCTTGGGGGCAAGGAGCCCCGACCCAGTGTCCACGTGCCTGTGTCCTCCCCCCTCACGCAGCACCAGCCCTACATCCCCTACATGCACGGCTACTCCTACAGCCAGTCCTATGACCCCAGCCACCCCAGCTACCGTGGCATGCCTGCCGTGATGATGCAGAACTACCCAGGTTCCTACCTGCCTTCCAGCTATTCTTTCTCCCCATATGGCAGCAAGGTCTCGGGGGGTGAAGATGCTGACAAGGCCCGAGCCAGCCCCAGCGTCAGTTGTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAGCATGCCAGTCACTACAAGAGCAAGTCTCCCACGATAAGTGATAAAACTTCTCAGGAGAGAGATCGGGGAGGCTGTGGGGTGGTTGGGGGTGGTGGCAGCTGTAGCAGCGTCGGGGGAGCAGGCGGGGGTGAAAGGAGTGTTGACCGGCCCCGCACCTCCCCTTCTCAGCGCCTGATGTCCACGCACCATCACCACCACCACCTGGGGTACTCACTGCTCCCAGCACAGTACAACTTACCCTATGCAGCAGGGCTTTCTTCTACAGCCATTGTTGCCAGCCAGCAAGGCTCGACTCCTTCACTCTACCCACCCCCCCGGAGGTGAGAATGAACACCAAGTGCCCGGATAAAGTCAGCCTCACGGGCCCGGACTGGCTTACCCAAGGAGGTGCTGGAGGTGCCGTTTAGACATCAGTTAAATGGTGTTGATCATCCTGTTTGCCGTTCCCACCATGACTGAAGGCAGACCCCCGGACTCCCCGACCCTCCCTCTTCCTCAGGAGCTGGAGAGCTGGTACTTAGCAAAAATATTTATTCTCTTGGCCACGGCCGTGACTGTCGTGGCCTCTGTGGAGATGAAGGCACGGGGAGCGACCAGGGGAACATGGCCTCAGCCCAGAGAAGCCACTGCTCCGTTCCCCAAGCCCCGGTAAGCCGCCGGAGCAGCACCACCCCCCAGGGAGGGCCCCCCAGCACTGGGCAAGGTCTGAAGACAGCACAGCAGCCATACCCCTCACCATCATTACCACCATCACCAGACCCTGCATCTCCCCAGTGGTTTGGGCCCTGGGAACTGGCAGCACGTGGAGGAATTAGAATCTCAGGAAAGAAATTCGGGGCTGTTTTCTCTGCAGTTGTGAAAACAAGGTCTTCAAACGTGAAGACTTCTCCCCTCTCACATGAGCACATGTAAACGCTCAGAGCCCAGCCTGGAAAGGGAGACCAAGGCATCTGCCCACCGTGGCCTTGGGCTGCCTGTCAGGCAGAGGGCCGGAGTCCCAAGGCCAGCGCCGGGCTCCCCGGGGATTCCAGGCGAGAGCTGGAGCATGAACGGAGTCTGTGAACAAGACGCTGCATCCCACCAAGTCCTGCTGCTGCTTAGCCTCCCCCTTGCCCTTTCCTCATCTCCCTCCCGACCCCTTGGTGCCTTTCCCAGGGGCATCTCATCTCTCTTCTTCTTTTCTACTGCTTGGCTTTTAAGACTCAGGCAGGTAAAATCGTATTCCCCCAGCATGGGGAGCTTTGGAGTCTGCCAGGAGGCAGGCCCTGGGACCGCCTAGCCCTCTGAGAGATGTCCTGTCCAAGCAGCTATCCAAGTGTCGGCCTCATCAAGGGGTCCAATTCTGTCCAGCCCAGTTTCTCTGTACACAACCACACGACTTCCTATAGCTCAGCCTGTAGCCCCACGCGTGCCAATATGAGCCGTGTTTCTTTGTAACACACGTTTTTGTTTTAGGGAACACTGCACCTTGGAGGGTGTCCGTCTGTCCCTTAGACCCTAGGACAACACATGCAAGCCATTACTCCTCAGAGCCACCGGGTGTAGTCAGTGGAGCTGTGCTCTGAGGCAGAGGCAGTTCTCTGCTCTCCTTAGAGATGCAGTCCAGTCCAGGCTTTATGCTGTTTGTCCTGGGAAAGTGACAATGATCTGGTAGCTTTACTACAGTTGCTTCTTCCCCAAGGTGTGGGGAGCTTTAGCTCTTACTTTGTTTTTGAGATATCATCCCTTTGTCCTCCTCTCCTGTCTTCCCTTGACCCTCTGGATTGAGAGATGAAGACTTACAGACACCAACCTAGGTTAGAGACGAGTCTTTGTGACCAGAGTGCCAAAAATGACCATTTAAGAGCAGGGACTTGGCTCTGACAGTGTGGGGCATGGAGATGGAAGACAGTAAGCACAACGCCCAGCAGAGGCTACTTTCCAAGATCCCCGGAGCCCTATTCTAGAGAGGCTTAGGGTCTTTTGCCCAAGAGGGGCCCCTCTGATCTATAGACCTTTCCTCTAGGTTCCCATGTCCTTGTTTTTGTTCAAGTTGAGTTCTGAGCCCTCTCCCAAGCCCCGCTGACTTAGACCTCTTAGTAGGCCCTTGAGCAGCCTCCCTGTCCCCCCCAGTCCTTCTGCCCCCCGCTGTCCTTTCGGGCCGTGCTCTGAGCAGTGACTTCCCTTTTACCCATGGAAGTCGTGGGTGTGGACACCTTCACCCCACCTCACCTGAGTCGTCCCCACCCAAAAGATGGCTCTGAATTTCAGCCTGCTTATGCCCTCCCGGCTCCTGTTGGGTGGAGTCATGGGCCCATCTCTGTTCCTGTTTGTTTTTAAATATTGTTGTGTGTTTTGTATCTGTGGCGCTGTCTTACAGCGTGCTCTGTACATATTGTGAAGAAACCGTTTGGAGTAATTTTCTTTTCCGTTGGGCAGGCATAGCCCGGGATTCCTGCCCTTTCCACTTTGTTCTGTAACAGAGAAGAGGAACTTCTGTATTAGCAGGGCAGCCTTGGGTTCTGCAGAAGGGAACAGCTTTTTTTCTCTTTTTCTCCCCCTTAAAAAAATTTGGCTTTTTGATCCTTACATCCTGAAAAGCAGGAGCTGAACTGCCCAGAAGAGCAGGTGAGAGCATCAATGGCAGAACAGCACTGCCCATTTCCTGATCCTCCTGGTCCCTGACCCTTGCCAGGCCCGTCGTCCCTCCCTGAAGTAACATGAAGCAGCAGCAGTGACGGGTGAAACAGAGCCTTGAGGAGCACTGAGTGAAGGGCTTGCTGTCCACCTCTAGCCTCTCCCCCTGGGGAGGAGGACCACAGGTGGGGAACCCATGGCACTGGCAACCCAGTCATAGGGATGAGACTCTCAAGGATCCCCACCCTACTTCACCCCAGCAAAGGCTGGATGAGTTTGCTGCTAAGGGCCAAGGTCACCAGACCAAGGCTCTGTCTGAGCTATCCCTGGCCCAGTTCTCTTGACAGGCACGGCTCATCCAAGCCCCACAGAGAAGCTGGAGGGAGGCAGCCTCGTGCCTAAGTAGGACAGCCAAGGCTTGGAGACCTGCTCTTTAGGACTCAAATCTGCTTCCTCCTCATTTAAGTTGTGCCAGTTCCCTTCATCCCCTTTCCTTGCCTGTACATGTATGTATACATGTATGTTTCCTTCTCTTACCTCACCCCCTCCACACATCTCAAGGTCAACGGACCACATGCAGAAGGCTTAAGAGGGCACCCATGAAATGAAATGATGCTTCTTGAATCTCTTCTCTCCAGGCTCCAAGGTGGGGGTGGGAGGGCTTGGTCTTGGGAGCGGGAGGAAAAGGCTACAGAAGGGCTAGTGTCATTGTATATGGGCCACTTGTTACCCC EMBV3_17996 TGGCCTCATTTCATAGAGGAGTGCTATTCGTTGCCAGGTGATTCCTTGGAGTTAGAGCCC Gene BVT0102_327807 + 0 NULL GK000018.2:56796325-56811420 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084332 TCONS_00084336 TCONS_00084340 TCONS_00084333 TCONS_00084335 TCONS_00084337 TCONS_00084334 TCONS_00084339 1 XLOC_051530 Coding TCONS_00084334 XLOC_051530 Coding Coding LOC784785 18:56784859-56798440 j TSS63192 5067 1 TCONS_00084334_5 649 0.05249654627985 5 0.627245949926362 0.000589380442648381 0.00332978322629315 0.00115358785411682 0.00147265009548328 0.00118366636020549 0.000365383123284172 0.00148862581048752 0.000672417980926818 0.00118675418497513 0.00198482263685995 0.000130012062069239 7.93118628395245e-05 0.00026860879893102 0.00108045488186106 0.00081332923091211 0.00115455052286724 0.000347631289074702 4.31909148610409e-13 0.00207531750600113 0.00117295408930726 0.000165052962104457 4.31300718597501e-06 0.000972349692114583 0.000775402054801272 0.000538416125378997 4.48136765126233e-06 0.000733905167423947 9.92760047361387e-09 0.000235950581565939 1.49692616182906e-05 XM_005228567.1 ZNF473 PREDICTED: Bos taurus zinc finger protein 473 (ZNF473), mRNA. 0.0 5514 99.93 0.60410499309256 XM_005258717.1 ZNF473 PREDICTED: Homo sapiens zinc finger protein 473 (ZNF473), 0.0 1106 75.28 0.313992500493389 TCONS_00084334_5 sp|Q8WTR7|ZN473_HUMAN ZN473_HUMAN Zinc finger protein 473; 0.0 725 57.21 0.998459167950693 5 coding 0 0 1 1 -0.284335167869289 0.264160412895942 0.0243431604624456 0.665409107010202 GCCCGGCACCGGAAGTGGATACGAGGAGGCGCGTGAGAGCAGTTGCGTCTCCGCCTCCCGCCTGGCTCCCGTCGTGTCTGTTAATCCAGTGGATTGCAGTCTCGAGGAAATTGCGACCCTCAAGGACATAGCCATGGACTTCACCTCAGAGAACTGGGAGCAGCTGGGGCAGGGGCAGGGAGACCTGTTCTGGGACATGGCGTTGGACAACTACTGGAACCTCTTCCTGCTGAACCCCCCTGGACCCAACCTGACCTTCCATCCAGATGGTGGGGAAAAGCTGGAGGCCCTGGTGAAAGAAAGCCCAGAGTCAACAGACACTGGCATAGCTGAGACTTCTCCTCTGCCTCAGGACTTCTTGGAAGCAGGACTCTTCCAAGAGATTACTGAGACTTTTTCCAAGGATGATCTCTGGAACTCCCATTTGGGAGAAGCCTCCATAGGCCAAACCTGGTTAGATAGTTTGCTAGGAGATTCAGAAAGTCTTCTGAGGTCTGATATTATCAGTCTGGAAAGTCCCACAGAATGCAAAAGCCACAAATTCAAGAGCCATGAACTCAAGATAGACCTCAGTCCTGAGTCCCACCTTTCCCCAGGAGCGGGTTCCATGACACTTGATCTCCCTGAAAAGAGCCTGGCACCAGCTAAGTCTCAGGAATGTGGGAATGACTTTGGGTGCTACTCAGACCACAGCCAGCACGATACCATCCAGGGAGGGGAGAAACCATATGAGTGCAGTGAGTGTGGGAAGAGCTTCAGCCAGAGTTACCATATGATCCAGCACTGGATTCTTCACAACAGGGAGCAGCATCCCACAGTGCTTCAAGAGTATGAGAAAGATGTCAACCAGCGTTCCTGCCTTTCCATGCAACCAGTGACTCACACAGGCTACAAATCCTATGTGTATAACAAGTTTGGGGAAACTTTTAGTGAGAATACACACCTTCTGTGTCATCAGAAAGTTCACACTGAAGAAGAACCATGGGAGAGTCAAGATGGTGACTGTCCAGCAGATCACAACTCACAGCCTTTTGAGTGTCATAAACCACCCCCAGGTAAAACCTACAATTGTAAAGAATGTGGCCAGAGTTTTAGCCAAACCTTTCATCTCTCTGTGCATCAGAAGACCCATACTCAGAAATGCTATGAATGTGCCAAATGCAAGGCAACCTTCAACTCCAACAGATACCTCCTCCAACATCAGAAAATTCATGCTGCAAAAATGATCCCTGAGGATCAGGAGTGCGGGAAGGCCTGCAAGCAGAGCTCCTTTCTTGTCCAACAGCAGTCTGTTCACACTGCAGAGAAGCCTTATAAGTGTGATGAGTGTGAGAAAACCTTTAGCCATAGCCTGGCCCTAAAGATCCACCAGAGGGTTCACAGTGGAGAGAAGAATTACAAATGCAACGAATGTGGGAAAGCCTTTTACCGGAACAGTCACCTTAGTGAACACCAGAGGGTTCACACGGGTTACAGGCCCCACAAATGTCACAAATGTGTCAAGAGTTTCAGCCGGCCCTCCCACCTGATTCGACACCTGTCCATGCACGCTACAGAAAAGCTCTACAGCTGTGCCAAATGCAAGAAGACCTTCAGCCACAATGAACACCTTAGCATTCACAATAGAGAAAAAGGACTCAGTGAGAGCCAGGAGATCTTATATGAGAAACCCGAGCACAGAGAGCATCCAAGGATCTGTGGGAAGCGCTTTAAGTGTAACAAATGCGAGAAAACCTTCCACTGCAGAAAATACCTGACTCAGCACAAGTTGATTCATGCCAGGGTGAAGCCCTTTGAGTGTAACCACTGTGGGAAAGCCTTTGGGCAAAGTTCACATCTCATCTGGCACCAGAAGATCCACTCTAGATTGAGATCATACAGATGTGGGGACTGTGGGAAGGCCTTTATCTACAGGACCTCCCTCATCAAACATCAGTCCCTCCACGTGATCGAGCACCCCTTTAAATGTAACGAATGTGGAAGGATCTTCAGCCAAAGTGCATGTCTCTTAGAACATCAGTTAATCCACACTACGAAGAAGCCCTTGATACCTAACAAGTGTGACAGTCTTGGCCCACAGTAACCACCTTATTCAGCATCAGGGAACTCAGGCCGGAAAGAGGCCCTTTGAGCAGAATGAATGTGGGGAAATTATCCAGGAGAGCTCATGCTTTTCTAAGCACCAGGGAGTTTACACAGATGAGAAGCCCTATATGTGTGGTGACTGTGGGAGAACCTTCAGCCTGCGTGCTCAGCTCGTTTACCACTAGAGAGTTCACACCGGAGAAAAGCCTTATATTTGTCAGGAATGTGGGAAAACCTTCAGCCAGAGCTCGTGCTTCTCTAAGCATCAGAGAATTCACAAAGGTGAAAAGTCTTATAAATGTGACAGTGGTGGGAAAGCTTTCATTCGGGGCACTCCGCTCATCCAACACCAGAGGATTCATACTGGAGAGAAGCCTTACGTTTGTCAGGAGTGCGGGGAAGCCTTCCAGCAGGGCTCATGCCTTTCTAAGCATCAGAGAGTTCATACCAGGGAGAAGCTTTATGTGTGTGCTAAATGTGGGAAAGCCTTTGCGCAGAAAACAAATCTGATGCAGCATGAGACAACTCACACAGGGGAGAAGCCTTATGCTTGTGGTGTGTGTGGGAGAGCCTTTCGCCTTAGGGCCCATCTCAGTCAGCACCAGAGAATTCACACCCAGGAGAAATCATATCAGTGTCAACATTGTCAGAAAGCCTTGTGCTGTTGCTCAGGTCTCAGCCGACAGCAGTGAGTTCACACCCCAAAGTAGCAGGTAGCAATCCTCCCCATGACCCCTGGGTAGCAGCAGGCTCCCAGACATCTGAGAATGTTCCTCCGAGGCCCAGAGTTGAAACCATCCCAGTGTAAGCCCCTCCCTGCCGTGAGTAATTAATCTCTCTGGTGATAAATTTTGATTAGAAAATTTACACACGTTTCATTAAAACAATGAAAACTGGAGCTTTGGAAGTCAGATAGACTGGACCCTGTTTACTGACTTCAATCCCAGTTCTGCCATCTGCCAGGTGATCTACAGAGAGTCATGGAACCTCTCAGGGATTCAGTATCCTCATCTGTAAGATGGGCACAATCCTAGTTACTACCTCAAAAGACTACTGTGAACATAAATAGATGCAAAACACTTAGAACCAAGTACCTATCAGATAGTGAGTACTCACCAAGTGTGAGCTACAAATACGCATCAGATATAACAAATACACTCTTTTACATTAAAACAAAGAGATGATTCAGTAACCCTCTATTTGTATTCAATTGCAGTTACTGTTACTAATATTACTCATGGCTTTAATTTTCAAAGTTTTCCTTCAGTATACCCTTGGTTTAATTGTTTGCAAAATATCAGCACTTTGTTCTTTATTGAAACGAAAAAAAAGTCTAGCCTTTTCCTTCCCTTCATCTCAGGTCTGTCCTAGTACTTTCTTAACTAACCCACAAAAAGCCAAGAAGAATCTGTAACATCTAACATCTCACAGAAAGAACTTTCCACTCCTAGTTTCCCAAACGTCTCACTCAAAAGGATCCCTCCCACATCCACATGCTACCCCTTCCCATAGTCTCCCATTTCAAATGGTTGGTTAAATGACGAGACCAAATTTATCATGAAAGTTAAAGCTGTAAACAGCTGGATTCAGTTATGAAAGCTGCAGTGGATTATCATTGTCTCCACATGGTTCACACGATCTATGCAGAAGATGTGCTTGGTGCAAAAATAGTGATGCACAGAAATGACTTCTGGAATGTTCCTCCTCCATCATTTGTCCAACCTGGCCACTCACAAGCACTTTACTATAGGCTCCAAGTTGGGGAACACCAATACTTTAAAGTGCTGCCCTTGCCTTGAAGCTTCTGGAATCGGGGAAATGAATGGCCTCATTTCATAGAGGAGTGCTATTCGTTGCCAGGTGATTCCTTGGAGTTAGAGCCCTTGCATTCACTGCTCACCATGGCCAGGCCTGTTCTACAACTGAGTCTCACTTCAGGGAAGCACGTGACCAGCTCTTTTGATGGCACCTCCTCAGCTCTGAGCTTTTGTGTTCCACTTGCTACATGATCCAGTCACCTGTTTCCTGAAGCACAAACAATCTTACAAAGATACTGGACTCTGGCACTTTTAATATTCTTTCATATTTTTGTTTCTTTTTTTTAAATATAAATTTATTTATTTTTGGTGCTAAAAAATGTTCAAGAGTCTATGCTCTGGGCCCCTGGGATATTTAAAACCTTGCACCTTGAGTTGCACCAGTTGGTTTGTTGAAAATGGGAACTTAGCAGCTGACCACACCACAGTGGGGAGTGTACTGGTTTTCAAATGGCTGAAAACGCCCAACTTCTGCCTTATTTGTATCTGAGCAAGGGGCCTGATATATACCCAAGGGTGGGGTAGGGGTGGGAACTCAAATTGCTAAGTGTATTCAAGCAAGAGTTTTGACACCAAAGGTAGAAGTCAGAGGCCCTGTGGAGAGCTGGCAGCCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTATCTGTGTAACTAATGATCTGTGTTCTGTGGACCAGGGTAGAAACGCCTACCCTCATGTTTGAGTGTTTGTTCTCTGATTAAAAGTTTTTTAATTTCTAAGGGTTGATTGCTTTTCTCAGCTCAGTGCCACACACCCAGCCAGGGGCTGGGCATGTACAGTCACTAACTGTCAAGTGCTCACAGTTCTGGGAGGGGAGGGCTCCTGATGGTGAAAACCATCCCATGATGAGATGGTTAATTCTGTTTTTCCAAAGCCCGGGAGGGTCAAGGACAACTAGGGAGCCACTCATTTTCAGTTGTTCGTCAGCACATCATCAGCCAGCAATTTTCCATCCTCATTAGTTCTGCCTAATCAAGGAGGAAGTGTGGACTGCATGTTGTTTATTCTTTTCTAGTTAAAAAGATACAGTTGGGCTCAGGCAAGAGTTGTTGCTAGAATTTAACATTATTTTGCTCTCCTGGTACTTATTTTACTTTCCTTCTCCCCCTTTATCCTCT EMBV3_07491 AGCTTAGGCACCACAGCCCATCCACCCACCTACCCACCCTCACAAGATGAAAACAAAGAT Gene GeneID:615430|PARVA:NM_001099144:231_cdna Constitutive 0 NULL GeneID:615430 15 GENE PARVA MGC159519 parvin, alpha EMBV3_23803 CCTCTTCCTGACGATGCACCTGAAACGCATCCTAAAGTTATGGAACTGCGCGAGCTGGTT Gene GeneID:100300290|LOC100300290:XM_002683959:2_cdna Constitutive 0 NULL GeneID:100300290 Un GENE LOC100300290 NULL hypothetical protein LOC100300290 EMBV3_27653 AAAATGCAGAGCCATTGATCAATTTGGATGGCAATTCGCATTTTGGTCCAGGAGCGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04821 TACCAGCGGGAGATCCAGGGCGGCTACATGGACATGTATCGCCGCAACCAGGTGTTGGAA Gene GeneID:513032|LOC513032:XM_002689025:74_cdna Constitutive 0 NULL GeneID:513032 7 GENE LOC513032 NULL similar to NEDD4-binding protein 3 (N4BP3) EMBV3_15304 TGTCGAGGCTTAGCTAGGGACACAGACTCCAGGGGAGCATGGAACAGGGGTTGCTTCAAA Gene BVT0102_420513 + 0 NULL GK000008.2:29170381-29353417 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05988 TGATGTGGTCAGCTTCAGAGGGTCTAGGGTGCGATGGGGAGGAAGGTTGTAAGCAATAAA Gene GeneID:537690|EXOC4:NM_001102207:21_cdna Constitutive 2 NULL GeneID:537690 4 GENE EXOC4 MGC160074 exocyst complex component 4 EMBV3_10895 AAAGTTGAAGGCTTTATATTTTACCTACTCTGTAAGTGAGAGAGACAAGAAGCAAAACCT Gene GeneID:534069|TGFB2:NM_001113252:8_cdna Constitutive 0 NULL GeneID:534069 16 GENE TGFB2 MGF transforming growth factor, beta 2 EMBV3_35393 CCCATCAGCCTTGCTCCCACTCAGGTCTTCATAGGTTGACCACCAAGTTAGCTGTCCATA Gene GeneID:618101|IQCA1:XM_002686568:17_cdna Constitutive 1 NULL GeneID:618101 3 GENE IQCA1 IQCA IQ motif containing with AAA domain 1 EMBV3_14118 GGAAAGGAACCGCCAAAGATTTCCAACAAGGTTGACGTGTGGTCAGTTGGAGTCATCTTC Gene GeneID:537517|TLK1:XM_002685281:67_cdna UTR3_Alt 2 NULL GeneID:537517 2 GENE TLK1 NULL tousled-like kinase 1 EMBV3_01191 CCGACTCTGCGGTCTCCTGGTTCTGATATCTTGGATCGTGGGTGTCATGTACTCCTTGTT Gene GeneID:788289|LOC788289:XM_002688700:61_cdna Constitutive 0 NULL GeneID:788289 7 GENE LOC788289 NULL similar to Olfactory receptor 7A10 (Olfactory receptor OR19-18) (OST027) EMBV3_12497 TGCCCCTGAGGTCGGGACTCTCCCATCTGGACACTTGAGGCACTTGCTTTATTTTTGAGA Gene GeneID:504854|CRELD1:NM_001014851:47_cdna Constitutive 1 NULL GeneID:504854 22 GENE CRELD1 MGC134226 cysteine-rich with EGF-like domains 1 EMBV3_28850 GGTACCAAAGGTGAAAAGGGAGACATCGGTGTTGGCATCGCAGGAGAAATTGGTCTTCCT Gene GeneID:507010|COL16A1:XM_002685618:281_cdna Constitutive 0 NULL GeneID:507010 2 GENE COL16A1 NULL collagen, type XVI, alpha 1 EMBV3_05562 GTGGGTAGAAGAAAATGTTCCTTCTTCTGTGACAGATGTAGCACTTCCAGCCCTTCTGGA Gene GeneID:615333|TMEM87A:NM_001083515:187_cdna UTR3_Alt 2 NULL GeneID:615333 10 GENE TMEM87A MGC142736 transmembrane protein 87A EMBV3_29752 AAAAGGGACTGGGAAGGGGGACCCGCCTGTGTGATTCCACCCAGAGCTGACGTTTCTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02192 TCCTGGATGCAGAAGACATCACACTGCTTACTGCCACAATAAAAAAGCACCCTCAGTCTA Gene GeneID:539780|NAIP:XM_002696280:24_cdna Constitutive 0 NULL GeneID:539780 20 GENE NAIP NULL NLR family, apoptosis inhibitory protein EMBV3_14131 CACAGCAGTGGTGTGTTCCAATAATTCAAGAAATGGAATATCTGACTTGCCAATAACCCC Gene GeneID:615569|LOC615569:XM_002707810:153_cdna Constitutive 0 NULL GeneID:615569 3 GENE LOC615569 NULL similar to Uncharacterized protein C1orf168 homolog EMBV3_21835 GATGGTCTTCATCTACTCACTGTTGGCACAGATAATCGAATGAGGCTCTGGAATAGTTCC Gene GeneID:518857|ERCC8:NM_001110181:12_cdna Constitutive 1 NULL GeneID:518857 20 GENE ERCC8 NULL excision repair cross-complementing rodent repair deficiency, complementation group 8 EMBV3_25154 GCCAGGTAAAGGCTACCTAGACTTCTGTCAGATCAACCCAGAACCTCACAGACAAGGTAA Gene BVT0101_041814 + 0 NULL GK000002.2:55186373-56934962 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18293 TGGACTGTGTGCAGCCCTCTCTCAGGAACACCTCTGTCTTTCCTGCCTTGAGCTTAGTTT Gene BVT0102_045350 + 0 NULL GK000024.2:61841567-61914059 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140776 1 XLOC_085214 NonCoding TCONS_00140776 XLOC_085214 NonCoding NonCoding - 24:61882941-61884333 - TSS104991 700 0.0671428571428571 2 0.498202731847592 0 0 5.28799670038403e-05 3.55892590349444e-05 0 0 0 8.44959681868816e-06 0.000529765827908011 0 0 0 0 1.34399629209398e-05 0.00299979159866639 0 0 0 0.000184395333525568 0.000102734821709592 0 0 0 0 0.000781928119891772 4.02598800455218e-05 0.000133923476961188 0 0 0 0 noncoding 0 0 0 0 0.0207118051273998 0.925404629742672 0.0221940308252529 0.713861413098048 GCTCCCCTCCTGCCCCGGAGTCCCGTGATCCTGGAAGTCCTGCGGGGCCATCCTGTGCTTGAAGATAAACACAGCCCCCCACCCTCGGGGGTTTAAAATGAAGGCATTTCCTCACCTGTAAAGTGACTAGAAGATTGCCCAGGTCCCTTCCAACAACTGCAGACTGTGTCATCGGCTGGATTTGGGCCCGAGCTGGACTGTGTGCAGCCCTCTCTCAGGAACACCTCTGTCTTTCCTGCCTTGAGCTTAGTTTCTGTCTAGAAAGTTGTAAGAGTTGAGACAATGAGAGGAGGCTGAGGAGCTGTTTGCTCCCCTGAATCAGGGGTTCGGATCCAGTTGAGGGATGCGGGGGTGGGGAGGAGAAGGTTCAGTCGATGCCTAGACCTGACACATTAACCCCTGGATGAATTATTTTCACTTCTGTGAAAAAGGCTTTGGCTATGGCTTCACGGAGAAGCCCGCCGCATCGTAAAACCACCGGTGTCACGAGCTGTCTTCTGGAGAGTGGAAACGGGCAGGATGTGGTTTGAACTGACAGAAAGATGAGGCAGTGCGTTCCTCCTTGGGGAGCTTGGAGCGACCATCAGGGGCAAGAACCAGAGGCTGCGACTTTCTGACTTGGAGCCAACAGTCAATTCAGGATCAGGGAAACCAGTTGCTTAGTGCCAAGGTGTTCAAAAAACAACAAGGAAACATACAC TCONS_00140777 s 3' 29758 TCONS_00140777 s 3' 28977 EMBV3_14902 CAGGTCTACGAGCAGGGGAAGATGACCTGTAGGAACATCACGGCCCAGCTGCCTACTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31984 GGTGCATCTCTTGCGGCTGACTTAGCACCTGTCACTGTGGCGTTTGGAGGTCAATTACTT Gene BVT0102_415060 + 1 EMBV3_11888 GK000011.2:88329065-88418179 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08788 ACTTCGCATGCTGGGAGTTGTAGTTCGATGCAGTTTAGGGTTTTGGGCGTGGGCTCCAAA Gene BVT0102_399628 + 1 EMBV3_10216 GK000019.2:45367550-45375504 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097298 1 XLOC_058213 NonCoding TCONS_00097298 XLOC_058213 NonCoding NonCoding LOC100847653 19:45373629-45375480 = TSS72124 540 1 TCONS_00097298_1 38 2 0.709189189189189 3.76321526909996e-05 9.1642317314428e-06 3.31909536965015e-06 0 2.05134474156498e-05 2.97715981853243e-05 3.62977369473492e-05 5.37004574033068e-05 4.37439621885482e-05 0.000107052645771727 7.6230512733666e-05 5.08378984150479e-09 2.31220357684396e-05 9.00232024043479e-05 0.000193462741724711 0.00103086548725952 0.00553408194383174 0.00120807489238059 1.65901010096034e-10 2.84639257135376e-05 0 0.000496083135151444 0.00102075333144573 0.000467418137654892 0 0 0 8.52402040415203e-05 0.000291057993383187 0.000451101958564361 XM_005220832.1 DCAKD PREDICTED: Bos taurus dephospho-CoA kinase domain containing (DCAKD), transcript variant X1, mRNA. 2e-146 522 100.00 0.533333333333333 NM_024819.4 DCAKD Homo sapiens dephospho-CoA kinase domain containing (DCAKD), 1e-22 111 74.68 0.238888888888889 0 noncoding 0 0 0 0 0.0245858901575672 0.826589412517144 -0.0232836305575418 0.686980359837623 AGAAGGGCCCGGGGTTGTCGAGGCCCACGCTCCGCCACCCGGGCGGTCGCTTCGCATGCTGGGAGTTGTAGTTCGATGCAGTTTAGGGTTTTGGGCGTGGGCTCCAAAATCCTAGATTTGACCTCTGCCGGCTCTGAGCCGTTATTGGCTGCCGTTAAGGACCGTTACCATTCTCAGATTTGCGGAGGCTGAATGAAGGCTAATGAAATGGAGCTTATGAAGAGTGATTATGGAGGATGATGGTGCTGGTGTCTGGCCCCTTGCCATTCTTGCAATCTAAAGCTTAAGTAAGACACCCTGCATGGTATTTTACTGCAAACCAAGCAGTTTTGGCTCAGTGGAGAGCTTTTCTGGTAGATAGGCAAGCAATGTGACTAAGGTGACCAAGCTCAGAATGCAAGTATGAGTCCAAGGTTCTGGAATCCAAGTTAGAATCTTCTAAAATCTTAGATTTCGTAGGATTCCTGATTTCTCTATAGTAAAAATTTAAATTTTTACGTTTTTTAAAAAAAATTAAAAAAAAAAAAGAAATTGAGTATA EMBV3_40544 GAGCCTCCAGATTTCCTCAGGCTTAGTCAACACCACTTGGAGTGTTAGCATTCCTCAGCT Gene BVT0102_089194 + 0 NULL GK000017.2:12917049-13286958 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074872 TCONS_00074870 1 XLOC_046448 Coding TCONS_00074872 XLOC_046448 NonCoding Coding - 17:13009535-13162077 - TSS56615 536 1 TCONS_00074872_1 81 3 0.996505857441606 0 0.000446066403934268 0.000303090786796386 1.21119355459077e-193 0 6.67360882219025e-06 0 0 3.24279324218424e-05 0 0 0 0 0 0 0 0 0 3.58197593234904e-321 7.17222115963122e-158 0 0 0 0 7.55049033585834e-157 0.000631480965177614 1.02759230849551e-244 0 0 0 0 noncoding 0 0 0 0 CCCAATCCCGCTTCAGTGAGAGGCAGCAACGCAAAGCAGTGCGGTGTCTGCTGTCTCTGGGGGCCGTAGGAGTCAAAGCAGCCGGGCTGCCGGGACTGGTGAGGACAGCGCAGCGCACGGCGGGTGCGGAGGGATGCCTGGCCGACTGCCGAAGGTTCTGCGAGCCCAGAGCTTCCAGGACACCATGCAAGAAAAGGCCAGGAGTGCTGAAAGTGAAAGCTGGATGAAAAGCTGTGAAGGAGACCAGGAGACCGCTGCCTTCCCACTGGGACCAGTTTCCGCATCTGCTGCCACCCCTCCTGGTGCTTCCCAAGGACGGAAACCGAAACCCTCCCTTCACACTGCCTTAAAACAATCTGCCCGAGAGTCTCCGAGTTGATTGGGATCAGCTGAGGAATGCTAACACTCCAAGTGGTGTTGACTAAGCCTGAGGAAATCTGGAGGCTCCACAGTGCCAGCACTTCCCAAGCGTCTCTTTCTTACGGCTTGCAGTTGGTGATGGCTGCTAGCCGGGAGGTCAGCTGAGGCTGTGAACT TCONS_00074874 s 5' 0 TCONS_00074867 TCONS_00074874 s 3' 100940 EMBV3_08183 CGCCTGAGGGAACAACAAGTAGAAAATGCAAACTAACGCAGCGACAGAAGTAGACTGCGG Gene BVT0102_052454 + 0 NULL GK000022.2:52862344-52871076 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129106 TCONS_00129103 TCONS_00129105 TCONS_00129108 TCONS_00129104 TCONS_00129107 1 XLOC_078025 Coding TCONS_00129105 XLOC_078025 Coding Coding KLHL18 22:52864458-52922356 j TSS96107 6595 1 TCONS_00129105_2 574 0.237149355572403 12 0.886298081075013 0.000294078590612013 0.00225276444736557 0.00067423317682194 3.89133815950414e-06 0.00179103687496255 4.86733247592386e-05 0.000894019474807851 0.000316233889121011 0.001661034113411 8.38880935616377e-05 0.000348352288620554 8.65125441427323e-05 0.000148904961626857 0.00116159881084066 0.000602897967314589 0.000300623089006751 0.000107407979589834 0.000235268515883775 0.00183674258017991 0.00203962982361318 0.00114406347052478 0.000147993275933298 0.000494873967723984 0.000223907585149678 0.00196088169599922 0.00225891440928544 0.00135319628092321 0.000352450435912093 5.26324272282627e-06 0.000116797366907244 XM_005223102.1 LOC100847139 PREDICTED: Bos taurus kelch-like protein 18-like (LOC100847139), 0.0 8219 100.00 0.690826383623958 NM_025010.4 KLHL18 Homo sapiens kelch-like family member 18 (KLHL18), mRNA. 0.0 4183 80.92 0.689613343442002 TCONS_00129105_2 sp|O94889|KLH18_HUMAN KLH18_HUMAN Kelch-like protein 18; 0.0 1154 96.69 0.998257839721254 9 coding 0 0 0 0 0.911399965165203 0.0364810883259035 -0.598551204471024 1.54599731050811e-05 GCCCTCGCCCCGCCCAGTTTAGTTCCGAGCCAGCACAGCCAGGCCTGCGCAGTCTCGGCGGCCGAGGAAGATGGTGGAGGACGGCGCGGAGGAGCTGGAGGACCTGGTGCACTTCTCCGTGTCCGAGTTGCCTAGTCGCGGCTACGGCGTCATGGAGGAGATCCGGCGGCAGGGCAAGCTGTGCGACGTGACGCTCAAGATCGGGGACCACAAATTCAGTGCTCACCGGATCGTCTTAGCAGCCTCTATCCCGTATTTCCATGCTATGTTTACAAATGACATGATGGAGTGCAAGCAGGATGAGATTGTAATGCAAGGAATGGACCCAAGTGCCCTGGAAGCTCTGATCAACTTTGCCTACAATGGCCACCTCGCCATTGACCAGCAGAACGTGCAGTCCTTGCTGATGGGGGCGAGCTTCCTGCAGCTGCAGAGCATCAAAGACGCCTGCTGCACGTTCCTCCGAGAACGGCTTCACCCCAAAAACTGCCTGGGCGTGCGCCAGTTTGCCGAGACCATGATGTGCGCCCTGCTGTACGACGCGGCCAACAGCTTCATCCACCAGCACTTTGTGGAGGTGTCCATGTCAGAGGAGTTCCTGGCCCTGCCCCTGGAGGACGTGCTTGAGCTGGTGTCTCGGGATGAGCTGAACGTGAAATCGGAGGAGCAGGTCTTCGAGGCTGTGCTGACCTGGGTCAGGTACGACCGGGATCAGAGGGGGCCCTGCCTGCCCGAGCTGCTCTCCAATATCCGCCTGCCCCTCTGCCGGCCCCAGTTCCTGTCGGACCGAGTGCAGCAGGATGACCTGGTGCGTTGCTGCCACAAGTGCAGGGACCTGGTAGATGAAGCAAAGGACTATCACCTCATGCCAGAGCGCCGGCCCCACCTGCCGGCTTTCAGAACTCGGCCTCGCTGCTGCACATCCATCGCTGGGCTCATCTATGCTGTGGGGGGCCTCAACTCAGCAGGTGACTCCCTGAATGTGGTGGAAGTGTTTGACCCCGTCGCCAACCGCTGGGAGAAGTGCCATCCCATGAGCACAGCCCGCAGCCGCGTCGGCGTGGCCGTGGTGAATGGGCTCCTCTACGCCATCGGCGGGTACGACGGCCAGCTGCGGCTGAGCACCGTGGAGGTCTACAACCCGGAGATGGACACGTGGACTCGAGTGAGGAGCATGAACAGCAAGAGAAGTGCCATGGGGACGGTCGTGCTGGACGGACAGATCTACGTCTGTGGTGGCTACGATGGCAACTCTTCTCTCAGCTCTGTGGAGACCTACTCACCTGAGACAGACAAGTGGACAGTGGTGACCCCGATGAGCTCGAACCGCAGTGCTGCGGGGGTTACAGTCTTTGAGGGCAGGATCTACGTGTCGGGCGGCCACGACGGTTTGCAGATCTTCAGCAGCGTGGAGCACTACAACCACCACACGGCCACGTGGCACCCGGCGGCCGGCATGCTCAACAAGCGCTGCCGCCACGGGGCCGCCTCCCTGGGAAGCAAGATGTTCGTGTGTGGGGGCTACGACGGCTCGGGCTTCCTCAGCATCGCCGAGGTGTACAGCTCAGTGGCGGACCAGTGGTGCCTGATCGTGCCCATGCTCACGCGCCGGAGCCGGGTCTCCCTGGTGGCCAGCTGCGGGCGGCTCTACGCTGTAGGGGGCTATGACGGACAGTCCAACCTGAGCTCGGTGGAGATGTACGACCCAGACACGGACCGCTGGACGTTCATGGCCCCCATGGCCTGTCACGAGGGCGGGGTCGGTGTGGGCTGCATCCCTCTGCTCACCATCTAAGGCGCAGGGGTGGGCCGTGGTGGGGCAGGGATCTGGTACAAACACGGGCAGCACTCCCTCCCGGGGACCGTCCCCCTGGGGAGAGGTGCTGGCCAGACGACAGGGTGAAACGGGAGCTCGCCGGAGGTCCAGGGTTTCAGGTGCTTGAGTCCTCCCTGGCTGTGCAGCCCTTGTGATCTTCAGGCCTGGGTGACCAGGATACACAGCGGGGGACAGAGCCCCTGTGGGTCCCGCCGCCGGCCGGTGACAGAGCGGCTCGGCCGGTCCACACATCCACGGGCTCCATCCAAGCCCACCTCCAAGGTGCCATAGCTCCGTGGGCCGCCCCTCTGCAGAGGGCTTTCCATCTTGACAGTCCTCGCCCACCGCACGCCAGCCGTATCGTGGCCAGTTTGCGATGGGGCAGCTGCAGTGGCCGAGGCCACTGGAAACTGTGGGATGTGGCCGGGGGAGAGGGACACAGGCCAGAGGTCCTCACTTCGAGCCTGCAGCATGGCAGGGCCAGCTGCACACGGGCCCCTGTGCCTCCTTCCATCCAAGGGCCCCGAGGATTCTTGTCTACATTGCTGAGCAAGCAGGGAGAACAGAAGCTTTTCCTGTGTCTAATTTTGGGATTGCCATGAGGTCTTTTTCATCTTATTCGAGAGAAACCGAGGGAGAAGGAAAAAAAAAAGATACTTGAAAGAAACTGAAGGAAAGTTAAAGCAACATTTGAAAGAAACTGGAAGGAAGAATACTTTTTTCAAGTGAGCTTTTTTTTTTTGCAAGAAGAAAACATAAAAGACACTAAAGGCAGTTACGTGTTTAAATGGAAAACCGCCACCCGCCATGAAAAGGGTGGTATCTGCTCCCACATTCTTCGGATCCCAGGGTCCCGAGGCCTCGCAGGGCACGCGGGGTTCCCTCTGAGCCCCTCCGCGCGTCTGGAACCAGTGCACTCTTACCCAGTCCTGCAGCACGGTGCTCACGGGGTTTGTCTCCACACCCACTGTCAGAGGACTCTTTTAATCGTAGGCTTAGCGAGTTGGCTGAGTTATCGCCGCCTTTCTAGGTGGGAGCTCCCAGCTCATCGCCGGGGCTCCGCGTGCCCGGTGGCCCCCTCCCGCTGCCACCGTGGAGCCCGTGCAGAGCGCCGCCCCCCCGCGCCCCTCCCTCCCTTGGCCGGCAGGAAGCAGCAGGTCTGGCCAGATGCTCATTTGCCCACCTGTCCTCCTCGGATAGTTTTCCTCTTCGTGACGCTTCTGGGGCACGTCGACCGTTCGTACCTCGAGAACCTAACCAGGGACTTGGTCCTTCCACCAGCCCAGGGCTGGCTTGGTCCAGCCGCCGCCTCTCCCCCGCCAGTCGGCTGCTCCCCCATCCACTCGCCAACTCCAGGGGTCTGGCCTCCCCTCCAGCCCTTGGCAGACCAACCAGCAAGGTGGACCTTTACACTCTCACAAAGCCGGCTTTACGACCCAAGGAAGTAAAAGCCGAAAGAATCTCTTGCTGCTGCAAAGAACAGATTTTATATTTCTTCCTATGATCTTAGCAAACGACCTCTTGAAGAGACTCCACGCTCCTCCTTCGTCCTCCCTGGATAGGACCTTGACGTTGCACAGCGGAAAACCGACGGGAGGACACTTCTGTGATCGGTGCGCTGGGCAGGGGAGCTGTTCCTCAACTGCTGCTGCCAAAAATCAGGTTTTCCTAAAATGCTTCCAGTAGAGACTTAAGAGAGGATACGTTTCCAACGCGAGATTGGGTCTCAGGGTCCCAGTCTCTACTTGGTTGGTCTCCTGCCCATCGCCGCATCTGCCCGGGTGTCCTGGAAGCCCATTCAGAAAGGCACAATGTGGCATTCTGAGACATCTCTCCTACCCTGGGACCAGGAGGCTTACCAATGTGTGCAATCGCCATGTTTCCAGAGGAAGTACCTTTGACACCTGCCACTTAGGTGGAGCTGGGCCTTTGCTAAAAGCACCCGAAAATGATGTTTTTATTTTAAAAGACTAAACAGTCTGATCCAGTTTAAGCCCAGGCTCACGGTGGAGCTCCAGCATTTCTCACTCCCTGTTTGCCTCTCAAGGTAGACTTGGAAGGAGGGTGGGGTCCGTGTTTCCTGTTAAGAGAGGAGTTTCCGATGCACATCTTCTTATTATAAGCCCCTTCCTTTTGTGAATTTGCAACAGCACTGACAAGCCTGAGTTGTGAATGTGTTAAGAATCAGCAAGGGGGCCTCGCCAGGTCCTTAGGATGCTGACCCAGATTTTGCCATCGGGGTTGAGAGCTCAGTTTCCCACCCATCTGCCACTCTTGCGGTGACCTTCCTATGCCTACCCCCACTTCCCTGGGGCGGAGTTACACTGCCGCACCTGGGCTCAGTGTTTCCAAGTAAGGTGGAGCCAGTGCTTTGACTTGGGTTCTGAGCACAAGCGAGCCGACACCAACATTTCACGCTCTCCACAGTAGGTTCCTCGGTCCGACGGTCATAACTTTTCACAGGTGGCTGGTCTGACCCTTTGGTGTTGGAGCCTTTCCAGGAAAACCATGAAAAGACATCACCCAGAGATACTGTGGAAGGGATGTGGGACAGACACTGTGAACAGTAAGCCTTGGGGTCCAGCCCAGCTCTGAGCAGAGGGCTGTGGCCTCAGCTGTCCTTGGGTATTTCCCCTTAGGTAATAACACAAGGAGCCTTCTCTTCTGGGTTTCATCTGAGAGCAAAGCCAGGATGGGAGCTGAAGACCAGCCTTTTGACTTGGCCACAGAGATGTGAGTAGCGTGGGGCTTTTATGAACAGTACTGCTCTGACGTACAAGATTCTGTGCACATACATTTTCATTCCTCAGGTAGATTGCTAGGAGCAGAATTGCTGGATCATACATACGGTGCCCTGAGGGTGGATACCCACTTCTCTTAGGAGATTGGAATGATTGATGTTTCGATACAGCATGAAAGAATCTCGAAATAATGATGCTTAGTGAAAGAAGCTGGTCAAAAAAGGAGGACATTGCTGTGTGCTGTGTCTTGGTCTGTTCAGGCTGCTATAAAAATTACCAAAGACTGACTGGCTTATAGACAGCAGAAATGTATTTCTTGCAATTCTGGAGGATGGGAAGTTCAAGATGAAGGGACTGGCAGATTCAGTGTCTAGTGAGGCCCCGCTTCCTGGCTCACAGACAGCCGCCTTTTTGCTGTGTGTCTTCACATGGCGGGGATGGCACGCGAGCTCTCCACAGTCCCTTTTATAACATCAGTTATTCCAGAGCCCTCATGACCTAATATCAGTACATCCCAAATGCCCAGTCTGCAAATACCATTACTTTAGAGGTTAGAATTTCAGCATGTGAATTTTGAGGGAACACAAACCTCCAGTCTATAGCAGATTTCCATTTATACAGAACTCCACCCAGCACTTCATGGCAAATAGATGAGGAAGCAATGGAAACAGTGACAGACTTTATTTTCTTGGGCTCCATAATCACCATGGACAATGACTGCAGCCATGAAATTAAAAGACACCTGCTCCTTGGAAGAAAAGCAGTGACCAACATATTAAAAAGCAGAGACATTACTTTGCCGACAAAGGTCCAGACATCTAGTCAGAGCTATGGTTTTTCCAGTAGTCGTGTATGGATGTGAGAGCTGGACCATAAAGAAGGCTGAACCCCGAAGAATTGATGCCTTCAAACTGTGGTATTGGAGAAGACTGTTGAGAGTCCCTTGGACTGCAAGGAGATCAAACCAGTCAGTCCTACAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATGCTAAAGCTCCAATCCTTTGGCCACCTGATGGGAAGGGCTGACTCATTAGAAAAGGCCCAGCTGCTGGGAAAGATTGAAGGCAGGAGAAGGGGACGACAGAGAATGAGATAGTTGGATGGCATCAGCGACTCAATGGACATGAGTTTGCACAAGCTGCGGGTTGTTGAAGGACAGGGAAGCCTGGCGCGTTGCGGTTCACAGGGTCACAGAGAGTCAGAGACGCCTGAGGGAACAACAAGTAGAAAATGCAAACTAACGCAGCGACAGAAGTAGATTGCGGATTGCCTGAGGACAGCAGGGCGATGAGGACTCAGAGTTTAACGGGTGTGAGGAGACTCTGGAGGGGTGGTGGGTATGTGCACTATCTTGTGGGGATGGTTTCACAGATGGACATTATGTCAAACTTACCAAATGTATACTTTGAATATGTGCAAGTTATTCTGTGTCAACTGCAGCTCAATAAAGCTGTTTAAAAAAAAAAGTTGGACACTGATTTGCATTGTGGCCTCTAAGGCCCCAAGGTTTACTGTCTCTTCTGGGGCTCCAGATCCTGGGGTGCAGTTCAGGCCGAGATGATGAGGGGACCTGTGGACTCCAAGGGCTCTGTGGTCTCCATCACGTGGAGATAAACCCAACTTAGCAGGTCCTTTGCTCAAGTCTAACACAAGCATTTTCCTTGATATAACGTTGTCTTCAGATTTACCTTAAAGGCTGTACAATATGCAGTCCAGTGAGTATAACACAGATTACTTAACCATTCCTCTGTTGGCTGGGCACTCAGGCCATTCCCTATTTCCAAGTAGCATAAATAAAACTGCCAGAACAGCAATATTTCTTAATTACTGTCTACAATCCTAGATAGTAATTTACCAATACATTAAGTTCTTAACATGTTCATACACTCTGATACTATTTCCATTCTAGGAACTTATTTTTATCTCAACATTGTTTAAAAACAAAACAAAAAAACGGGAACAACTTCAACAGCAGGAGTAACTTAAATAAATGGAAACCTAGTCACC EMBV3_06135 CTTGGAGTCCAGGCCGGCTGACAAGGACAGAAAGGCTGGCAGGGACCCTCTGGTGGACAG Gene GeneID:100301323|LOC100301323:XM_002694922:811_cdna Constitutive 0 NULL GeneID:100301323 18 GENE LOC100301323 NULL similar to low density lipoprotein receptor-related protein 3 EMBV3_22658 AAATGCATGTTGAGAATATGGGACATCACCTGGGAAGCCGTGTGCCCCTTGCACGTCCTG Gene BVT0101_066714 + 0 NULL GK000017.2:6082122-6083205 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074733 TCONS_00074731 TCONS_00074735 TCONS_00074730 1 XLOC_046422 Coding TCONS_00074735 XLOC_046422 Coding Coding PET112 17:6057311-6083675 j TSS56548 2689 1 TCONS_00074735_3 189 0.0189661584232057 5 0.89819064598111 0.00342900816637169 0.000564016189442737 1.79438312222936e-07 0.00155966368106546 9.43551122103883e-78 3.54732640670357e-18 0.00137516883087493 0.00207658634579092 0.00121340461950094 0.000142158406056261 1.16768887558799e-05 2.94767221034231e-10 1.1274565080153e-43 5.28314041087531e-25 0.000450830892474645 0.000884298124007044 7.13688486686673e-05 0.00127610030777879 0.00232784942163346 2.53450142853625e-06 0.000252790605364916 0.000344916534641409 6.29926150766852e-75 0.00238245690268337 2.72962859360489e-22 1.47725568000398e-07 2.5409920006163e-20 3.7101960634837e-05 0.000250713278286835 5.14470096120735e-23 NM_001046343.1 PET112 Bos taurus PET112 homolog (yeast) (PET112), mRNA. 0.0 1865 99.81 0.386017106731127 NM_004564.2 PET112 Homo sapiens PET112 homolog (yeast) (PET112), mRNA. 1e-151 542 84.13 0.18631461509855 TCONS_00074735_3 sp|Q99JT1|GATB_MOUSE GATB_MOUSE Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; 1e-80 254 78.34 0.825396825396825 1 coding 1 1 1 1 -2.08168841278312 0.0302944634400756 -0.0783825859762587 0.260295735942978 AGGAATGATGGGGAAGCACAGAGTTCATGTGCAGATTCAGGACCATCTTCTCCGTAGGAACACCCCTCTGCTCAGTGACACGCGAGAGCCCAGCCCGAATGAAGTTGGCCTACTGGAGTTCTTCCAAAATGTGATCAAAGAAACTAGGGCAGAGCCCAAAAAAGTGACTAGTTGGGTCCTCAACACTTTTCTGGGCTTCTTAAAGCAACAGAACCTTGCCGTCAGTGAGAGTCCTGTCACGCCCTCCGCCCTGGCTGAGCTGCTGGACCTGCTGGACAGGAAGGCCATCTCTGCGCCCGCAGCCAAGCAGGTGTTTGAGGAACTGTGGAGGAATGAAGGCAAGACCCCAGCACAGATCGTTGCAGAAAAGAAGCTTGAACTGCTGCAGGACCCAGAGGCCCTGGAGCAGCTCTGCCGCTCCACGCTGGAGGCACACCCCGACGTGGTAATGGATCTAAAGAGGGGAAACCCCAGAGCTATAAACAAACTGATTGGGTTGGTCCGAAAAGCGACTCTGGGCCGAGCAGATCCAACAGCGATCAAGGAGGTGCTGGAGAGGCAGCTGTCATCCTGATGGGTTCGGGTCCCCCTGCCAAGGCCCGGCCAGAGCCTGTGCAAGCTGATGTCCGGGTCCCTGCCCACCTGCGCCTGGAGATGCCGCCTCCACAGAAGGCTTCATGGACATCACAGGGTTCCAGGAGAGGTGTGGCGACGGTGAGAAACGCAGTGACGCTGAGCGCGCACACTCTCAGATGCTGTACCTCCTAGGACGACATCTCACTCTGCAGGGCCCTCATCCATTTGTAAGCACGTCCTCTGGGCCCAGCATCATTCTAGGCGCTGGGGATGGGCAGTGGTGGAGAGAGACGGTGGTCTGGACGCAGTATTTTGTTTGGGGAGCTCTCATGGTTGGGGAGGAGGGTATGAGCCTTAGTTAATACCATGAAGTAGTGGTATTCTCCCATCCACTGAGTAAAACTGTTGTTGCTCACTCAGTGCTCTGGGATCCCAGAAAGCAGAGATCTGAGCATAAGGGATTTTTTTCCTCCATAAAAAAGACAACATCAGTTTTCAAATAGATTTAATGAATAAAATATACTGAAATATCACATAAAAAATTAACTTATATGTCAAAGATTGTGCAGTTGATTGATAACTCCCCCTCCCCACCCTCAGGCCAAAAAGTTTGATAAGGAGATAAAAAAGCTGTAACATTAAACTGATTTGTTTTGCCTGGGAAGAGTAAGAGGACAAACCAGTAAATGGAAATTGTGACCTTTAGCGGTCTCTGTGGTCCAGTTAAGAGCACCTCCCAGGGTTGCCCTCCACCCCCACTCCCCCCTGCCCCACCGCAATTCCCGGGACAGTATTAGTGTTTCTCTGCTTCCCCGGGGGGCCCCCTGTGTTCCCCTCGTGCCTCTGTTACCTCTGACTCAGTGCGAAAGACCACATTTGCAAGTTCTGATTTTTAAAAGCACATGTCAAGTAAGCTGACATAAGAGGACGAAATCTTTGGCAGCCCTGACTTTACACTGAGTTCTGTCTGTGCTGAGAAGAGGACAAGTGTCTTCATCATGAGCGGTGCTCCCAAGGCAGCGGGGACCCGGAGAAGAGCAGACTGTCCCCCGCCAGTGCCTCAGCTGTTCACACTTCTGGTTGTGGACGCTGGCTCAGGATTTCCCTAACTGGGAGTATTGGGAGGACTGTCCTTCTTCCCAGCCAGAAGAGCAGGGGCAGAAAGGAAACGAGCCATCTGGTTTATTTCAGACAGGCATGAAGAGGTAAGGTTTTACTTTGTAAAAAATGCATGTTGAGAATATGGGACATCACCTGGGAAGCCGTGTGCCCCTTGCACGTCCTGTTAACGGTTCTGAAAACCACTGGGCCTGACAGTAAACTTCTCATCAAGCTGCTTTCGAGACAGAAAGTCAGAGCCAGTCCCCAACCCCTGACCCCCAACCCCTTTGCTCCTGAGACTGGAATCTGGCAGCAGCATGATTTTGTAAGAAACAGTAAGAGTTCAGTTTTGTTTTCCAAACTCCATTTTCACCAAAGATCTGGCTTCTTGGTCATCAGACTTTACAGAAAGCACTAGCCAACCTTTGCAGACCATTTTAAATCAAGGGCTGACTTGAATGGGACTGGAGAGGGGTGGGGACAGTTGAATGAAGACCATTTACCAATAATATCGTGTCATATATAAACTGTATTATGGACTGATCATTTTGGAGAAAAATGCCATTGCTGGGGTGAGGGTGGGGGGCAGAGAGAAGGAAATGGGTAAAAGGGGGTCAGCTGTCTGGCAGCAGCAGAAACAGCCCTTGGTGGTGAACACACTGTAACGTTTAGTGAAGCAGAAACGTGTCATCCACATGAAACATACAGGGTTATAAACCGGTTGCCTCAGTTTAACACTGTGATCTGCTGATTATCGTCTGGCTCTGACAACTGCCCGTTATCTTGAATGCCCACTTCCAAAATCCAAAAAATCAGATTATGTTGTTACAACTGCTAATAGGAAAAAAAAAAACACAGCTGATATCTTACTTGGAGCCTGACTAGAGATTTGAAATATGTCTTTATGTAACGCCCTAAGAAATTCACATGTGGCTCTACTTGTAAAAAGGGCTTCAACGAAATACAGTGTTAAATGCACTTTTGCATGAGTGTGAATTTAGTCTGGTGGTCT EMBV3_04274 CTTTGTCCTCCGGGAATTAGGTACAGGGGTTCATAGGTTCTATTTCTTCCCAAGAGCCCC Gene GeneID:497012|UBTF:XM_002696042:328_cdna Constitutive 1 NULL GeneID:497012 19 GENE UBTF UBF upstream binding transcription factor, RNA polymerase I EMBV3_32393 CACGATCAAGTTCCAGATGAAGAAGGTGCTGTGTCTGGCAGTGGCTGTTGGCCATGTGAA Gene GeneID:787484|LOC787484:XM_002685616:275_cdna Constitutive 0 NULL GeneID:787484 2 GENE LOC787484 NULL similar to ribosomal protein L10a EMBV3_39827 TTTCCTGGGAAGTTACCCAATCGAAAGCGAACCTAAGGGTTCTCCTGTGCACTGTGGGAT Gene BVT0102_075394 + 0 NULL GK000018.2:5254091-5283871 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33323 TTCCCGCGAGCAGTTCACCGCGGCGTCCGGCATGGGTCAGTAAGATACAAGCTCTGATGG Variant GeneID:282311|PLA2G7:NM_174578:213_cdna 312^454 2 EMBV3_11441 GeneID:282311 23 GENE PLA2G7 NULL phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) EMBV3_32577 CCAGGTCCCGAGGACAAGTTACATGGACAGCCTGTACAGATTCGACTGGGACCACTGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04554 CCGCGCAAACAAGTGCGAACAGTGGGCAAGAGGACCAGTACGACTACGAGAACTAAAGAT Gene GeneID:100337308|LOC100337308:XM_002684003:5_cdna Constitutive 0 NULL GeneID:100337308 Un GENE LOC100337308 NULL hypothetical protein LOC100337308 EMBV3_38325 ATGGGTTTTTAACTTTTCCAGTGAAGGTCTACATGCTGTGAGGAGCAGGGTGAGGGCTGC Gene BVT0102_110913 + 0 NULL GK000016.2:29734497-29758138 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27073 CGAGAAAGACGCAAAGTTGTTCATTGGGAACAACTGACAATCTATAGTCAACTGCCAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42811 GCAGGACAACCTTGCGAGTGTGAAGGAGACTGACAAGAAGTGGGCCGAGCAATACCTTAA Gene GeneID:613357|ERP29:NM_001076271:255_cdna Constitutive 3 NULL GeneID:613357 17 GENE ERP29 MGC140608 endoplasmic reticulum protein 29 EMBV3_41165 CCAAAGGATACCAATAAACTCCAGTAACCAACCCTAGAGAATGGAGAGCCATAAACTGCT Gene BVV0102_041260 + 0 NULL GK000003.2:6847223-6900265 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31794 TCAGGCAGCCATTCTTGTGATCCTGCATCTCCCCTGAGGCTTCTGCATTTCTCTGGAACA Gene GeneID:540005|PIP4K2C:NM_001076196:28_cdna Constitutive 0 NULL GeneID:540005 5 GENE PIP4K2C MGC140500 phosphatidylinositol-5-phosphate 4-kinase, type II, gamma EMBV3_11608 ATAGCCATCTGCAACCCCCTGCTTTACACCGTTATTATGTCCAAGAGGATTTGCTGCCAG Gene GeneID:789936|LOC789936:XM_002683802:2_cdna Constitutive 0 NULL GeneID:789936 24 GENE LOC789936 NULL similar to olfactory receptor 1160 EMBV3_07120 ACAATGTCTCCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCT Gene BVV0101_008318 + 0 NULL GK000022.2:54115739-54136283 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00218428 TCONS_00175509 TCONS_00061487 TCONS_00166913 TCONS_00061484 TCONS_00210913 TCONS_00009083 TCONS_00161488 TCONS_00061482 TCONS_00165977 TCONS_00166887 TCONS_00071091 TCONS_00253740 TCONS_00061481 TCONS_00148960 TCONS_00250903 TCONS_00223765 TCONS_00176420 TCONS_00061490 TCONS_00123823 TCONS_00251792 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00061485 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00061491 TCONS_00107436 TCONS_00198299 TCONS_00174805 TCONS_00170890 TCONS_00147537 TCONS_00171428 TCONS_00061483 TCONS_00207933 TCONS_00205125 TCONS_00174806 TCONS_00061489 TCONS_00188145 TCONS_00115209 TCONS_00232824 TCONS_00125692 TCONS_00061488 TCONS_00002600 TCONS_00000529 TCONS_00198820 TCONS_00061486 TCONS_00250582 TCONS_00170891 36 XLOC_151107 XLOC_131748 XLOC_105290 XLOC_036985 XLOC_101749 XLOC_129423 XLOC_004639 XLOC_098377 XLOC_100817 XLOC_101723 XLOC_042864 XLOC_156679 XLOC_090838 XLOC_153846 XLOC_137064 XLOC_106198 XLOC_075375 XLOC_154733 XLOC_104695 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_063346 XLOC_119956 XLOC_103679 XLOC_089424 XLOC_103815 XLOC_126448 XLOC_124587 XLOC_114188 XLOC_142307 XLOC_077234 XLOC_000643 XLOC_000141 XLOC_120473 XLOC_153525 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_32834 AGATAGTGAAGGACAGGGAAGTGTGGCGTGCTGCAGTTCATGGGGTTGCAGAGAGTCAGA Gene GeneID:536810|MTMR2:NM_001102194:17_cdna Constitutive 1 NULL GeneID:536810 15 GENE MTMR2 MGC142907 myotubularin related protein 2 EMBV3_19367 AGGTCACCCTCAAGAGCAACTTCTCGTTTGACTGGTACATCAAGACTTCACACAACCACC Gene GeneID:407124|ITGAM:NM_001039957:239_cdna Constitutive 0 NULL GeneID:407124 25 GENE ITGAM CD11B integrin, alpha M (complement component 3 receptor 3 subunit) EMBV3_05627 AAGTACTTCAAGGTCTTCGAGGTCACCAAGACTACGGAGAGCTTTGCCAGCAAGGTCCAG Gene GeneID:525035|LOC525035:XM_002697813:444_cdna Constitutive 0 NULL GeneID:525035 24 GENE LOC525035 NULL similar to lipoxygenase homology domains 1 EMBV3_39196 CATTTTCATAGCTCTCAGACTCTGTATCTGTTACCAGTTACTCTCCATTTCCCCTGCCCC Gene BVV0102_355587 + 1 EMBV3_06466 GK000008.2:44619119-44631682 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225152 TCONS_00225153 1 XLOC_137694 Coding TCONS_00225152 XLOC_137694 Coding Coding CBWD2 8:44573002-44625301 j TSS168645 1908 1 TCONS_00225152_1 398 0.293501048218029 16 0.963822708325366 0.00268787786513401 0.00121110296701685 0.00166336498943734 0.00062601751381618 0.000916508450203549 0.000604692094648635 0.00054663266902311 0.000248654089689223 0.000588626385474065 0.000278014156473653 0.00138094085874782 2.14926060780349e-05 4.59120188740453e-05 0.000733690858482038 2.04394652562239e-05 0.00341764849037537 0.00041699996927319 0.000258176464523866 0.00372216844691995 0.00233945201853583 0.000385898500112648 0.000452435618688491 0.000737150253504227 0.00228472470271338 0.000873353132532818 0.00104082123213845 0.000389760259046057 0.000470290818478342 0.000231117828901504 0.000424406000902983 XM_005210001.1 CBWD2 PREDICTED: Bos taurus COBW domain containing 5 (CBWD2), transcript 0.0 2760 100.00 0.801362683438155 NM_201453.2 CBWD3 Homo sapiens COBW domain containing 3 (CBWD3), mRNA. 0.0 1636 89.50 0.640985324947589 TCONS_00225152_1 sp|Q8IUF1|CBWD2_HUMAN CBWD2_HUMAN COBW domain-containing protein 2; 0.0 699 88.16 0.994974874371859 2 coding 0 0 0 0 -0.0290997299641351 0.875703810019422 -0.0365972222098855 0.745679462621281 GCGTTTTGCGTGCGCAGCTGCGGGTTGTGGGGGTCTTGATCCCAGGTCCTGAGTGTGGTGGGGAGAGGTGAGCTGTGGTGTTTGCAAGATGTCTCGTGCTGTTGACTCGGCGGATGAGGAAGAGGAGCAGGCGGAAGAGGATTGTCCTGAATTGGTCCCCATTGAGGCGAAGCAAAGAGAGGTGAAGGAGGAGGAGGAAAAGTCTGGCCCCGGCGCTAAGATCCCAGTCACAATTATCACCGGGTATTTAGGTGCTGGGAAGACAACACTTCTTAACTATATTTTGACAGAGCAACATAGTAAAAGAATAGCAGTGATTTTAAATGAATTTGGGGAAGGAAGTGCAGTGGAGAAATCCTTAGCTGTCAGCCAAGATGGAGAACTCTACGAAGAATGGCTGGAACTTAGAAACGGTTGCCTCTGCTGTTCTGTAAAGGACAATGGCCTTAGAGCTATTGAGAATTTGATGAAGAAGAAAGGGAAATTTGATTACATACTGTTAGAGACCACTGGATTAGCAGATCCTGGTGCTGTAGCTTCTATGTTTTGGGTTGATGCTGAATTAGGGGTTGATATTTATCTTGATGGTATCATAACTGTTGTAGATTCAAAATATGGATTAAAACATTTAGCAGAAGAAAAACCTGATGGACTTATCAATGAAGCTTCTAGGCAAGTTGCTTTGGCAGATATCATCATCATCAATAAAACAGACTTGGTTTCAGAAGAGGATTTAAACAAGTTAAGAACAACTGTTAGATCAATAAATGGACTGGGAAAAATTTTAGAAACACAGAGATCAAGAGTTGACCTTGCAAAAGTATTAGATCTTCATGCCTTTGACAGTCTCTCTGGAATAAGTTTGCAGAAAAAACTTCAACATGTGCCAACAACACAACCTCATCTTGATCAGAGTATTATTACAGTCACATTTGAAGTACCAGGAAATGCAGAGGAAGAAAGTCTAAATGTTTATATTCAGAATCTTCTGTGGGAAAAGAATGTGAGGAACAGGGATGACGCCTGCATGGAGGTCATACGACTGAAGGGGCTAGTGTCAATCAAAGACAAACCGCAACAAGTGATTGTCCAGGGTGTCCATGAGCTATATGATCTGGAGGAGACACCAGTGAACTGGGAAGACGACAGTGAGAGAACAAACCGATTGGTCCTTATTGGCAGGAATTTAGATAAGGATATTCTTAAACAACTATTTATAGCTACTGTGACTGAAACAGAAAAGCGATGGACAACACATTTCCAAGAAGATCAAGTTTGTCCATAACACTAGAAGTATCGCCAAAAGGACTGGATGATAAAAGCTTCCTAGGTGGTTCAGTGGTAAAGAATCCACCTGTGGAGGAGACATGGAGGTGATATTGAAAGAAGTGAATCCGCAATGCAGGAGACATGGGTTCAGTCTCTGGGTTAAGAAGATCCCCGAAGGAGGAAATGGCTTCCCCACTCTAGTGGGATTGCCTGAGAAATCCCGTGGACAGAGGAATCTGGCGGGCTACAATCCACTGGGTCACAAAGAGCCACTGACACAACTGAACAACTAAACAACATTATTTTGTACATCAATTTTATTTAGATATAATTCACAGAAAACTTACCCTTTGAAGTATACAATTCTTGGCTTTAGTATATCCCCAGGTAAAGGAGAAACCATTACAACTATCTAGTTCCAGAACATTTTCATAGCTCTCAGACTCTGTATCTGTTACCAGTTACTCTCCATTTCCCCTGCCCCTATTTCCCAGCAACCACTCATCTACTTTCTGTCCCAATAGGTTTGCCCATTCAGACTCCTTTCACTTACCATAATGTTTTCAAGGTTCATCCATGTTGTAGCATGGATCAACATTTTGTTTCTTTTTATTGCTGAATAAAATTCTATAGACCACA EMBV3_10310 GCCTTCTAGAACAGTAGACACAAAACAGGCTCAGGACTTAGCAAGAAGTTATGGAATTCC Gene GeneID:541140|KRAS:NM_001110001:46_cdna UTR3_Alt 3 NULL GeneID:541140 5 GENE KRAS KRAS2 p21ras v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog EMBV3_36999 TTGGGTTCTTGATTAGACTGGTGCCCCTGCTTCTGCTGCTTGGCTATTCTCTGAACAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35298 TTCCCTTTCTTCATAAGCCATGAGCAAGTGTCACCCGAGACTCGAGACCTGAGCGTGTTT Gene BVT0101_032778 + 0 NULL GK000025.2:3344130-3373124 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147728 1 XLOC_089615 NonCoding TCONS_00147728 XLOC_089615 NonCoding NonCoding - 25:3344740-3345938 - TSS110263 1198 1 TCONS_00147728_1 103 0.297996661101836 1 0 0.000522423240157212 0.00140912966055793 0.00085742380549585 9.01117509650195e-05 7.41812914075804e-05 5.97171523332971e-06 0.000121696346689193 7.40573624384052e-05 5.26887137036535e-05 0 6.36946536774217e-07 2.08929717467134e-05 0.00029219754466335 0.000180620723610538 3.68579368072087e-05 0 0 0 0.000610546876944612 0.00170481327244971 0.00139369922956535 0 0 0 0.000404836804906559 0.00134087472685409 0.000254320908433127 8.01768156270392e-06 0 0 XM_005227454.1 THOC2 PREDICTED: Bos taurus THO complex 2 (THOC2), transcript variant X5, 8e-16 89.7 76.47 0.0984974958263773 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 2e-24 118 81.10 0.104340567612688 0 noncoding 0 0 0 0 -0.0648163930390604 0.664004709191442 -0.0201928237088125 0.69959467410054 GCTGTCACTGACAGACTCGCGCCCGCGCCGCCCCTCGCCCCGCCGCAGCGCGCACGCGCGGCCCGCGCACGCCGCCGCCAGATCCGGGGCACGCGCACGGTGCGCGCGCCGGGACGACAGGGCTGCGGGACAGAGGCGGGCCGTGTGCTGAGGCCCCGCCCTCCGCCCTGCGCCCGGGGCCGCGCCGCGCCCTGACCGCGGGCTGCGCGCGATGCGGGGATTACGGACGCCGCTGAGAGACCGCCGTTCCTCGCAGGTCGGCCCCCAGACCCGCTCGGGGAAACCTGAGGGCATCTACTAGTTAAGGAGCTGCTGAGGTGCGACGTTTGGGACGTGGAAATGTTTGCCCTCCCGCTCAACACACCTTGTTTATAAATGGAAGTTTGCGACTATTGCCTGTGCCTAAAGGGAGGCTTCCCTTTCTTCATAAGCCATGAGCAAGTGTCACCCGAGACTCGAGACCTGAGCGTGTTTGTGGCGACCATCGCGGTGCAGTCCGAGCCCCAGCCTCTGCTGGCCAGACAGAGCCTCAAGGAGGCCGTGGTTGACCCTGGAAAGCTGGTGCCACTGAGACGCAGCTTCTGCAGCCCCAGGGAGGGTTTCCCTTCCCGTCCTTGGGTCGTCTTCCCCTCCTCCTGGACAACTGTTTTTCCGTTTCCACAGAGGAAGTTTTCAAAGCAAAAGTGACCTGGTGAGTGCTGTCTGCAAGGTGAAATACAGCCCTCTGCTTCCCAGGGCACCAGTCCTGACTTTGTCATCCACACACCTCACAGTACCTCCTGCCAGTCACCAGGGTCTGCGACCACTTTGCCTCACCAGGTTTCACTGCTAAATTAGAAAATAAAGTAAAATGCCGTTTGTCTGCATGGTGGAATATTATTTGGCCGTGAAAAGGGGGTGGTGGGCTGATTCACTGCTGTAACCTGGGTAAATCTTGAAAACATGATGCTAAGTGAAAAAAGCCCATCAGTAAAGACTTCATATTGTACAATTCCAGTGTATGAGATGTCCAGAATAGGCAAATCCAAAGAGACAGAAAGCAGATTAGTGATTGTTGGGGATTGGTGGTGATGAGAATGTTCCGGAACTACATGGAGGTGGCAGTCACACAATACTGTGAAAGTACTCAATGCCACTGAATTGTACACTTTGAAATGGTTCAAACGGTAGATTTTATCTTATGTGTATTTTATCACAA TCONS_00146006 . 5' 125 TCONS_00146006 . 5' 125 EMBV3_08583 GCGATAAAGCTGGATAGAGAGCAAGGCCAGAATCATGACAGACTATAAAGACCGCTGAGG Gene BVT0102_002833 + 1 EMBV3_38060 GK000016.2:75213791-75228236 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32646 GTCAGGATGACCATAACTGGAGGAGTGAGTTTTGTGCCCAGATAGCCTCTGAACGGTTAC Gene GeneID:512541|ACOT4:XM_002691000:307_cdna Constitutive 0 NULL GeneID:512541 10 GENE ACOT4 NULL acyl-CoA thioesterase 4 EMBV3_08716 CAAGCGGTCCTTGTGCCAAGTCCCCAAACTACAGGATTTAGGAGTTCGGTGCAGAAGCTT Gene GeneID:523101|ANKRD58:XM_002699470:48_cdna Constitutive 0 NULL GeneID:523101 X GENE ANKRD58 NULL ankyrin repeat domain 58 EMBV3_19854 GCTTTCATCATAGCTCGGAATGCTTTGCTGCTTTCACCTGTTCCTATTCTCTCTGCCCGG Gene GeneID:512316|LOC512316:XM_002693180:151_cdna Constitutive 0 NULL GeneID:512316 15 GENE LOC512316 NULL similar to olfactory receptor, family 56, subfamily A, member 1 EMBV3_03152 CGTCCTTGGACAGCTGCCGCCTTGATTTGCATCCCGAGTCTCTTCTGTAAACTCTTGTAT Gene GeneID:509706|ZNF74:XM_002694650:163_cdna Constitutive 0 NULL GeneID:509706 17 GENE ZNF74 NULL zinc finger protein 74 EMBV3_20487 GAGTGAAGTAGAGACTTTGTTCCATGCCCTGCTGAAGTGCAGATAAGTGTTTTCTATTGC Gene BVT0101_043779 + 1 EMBV3_25843 GK000008.2:102217722-102489019 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226458 1 XLOC_138007 NonCoding TCONS_00226458 XLOC_138007 NonCoding NonCoding - 8:102303412-102305273 - TSS169315 585 0.105982905982906 3 0.687096774193548 9.30302898216531e-05 5.64113020065878e-05 0.000149671134826652 2.83903149821073e-05 0.000118154777405765 0 0.000189405750158838 0.000161769869811973 0 0 0 0 0 0 0 0 0 0 0.000551609158098813 0.000356498153201823 0.000518923656587336 0 0 0 5.92174297990875e-05 0.000457653781238552 0.000420625122405008 0 0 0 0 noncoding 0 0 0 0 -0.0493775831974264 0.749604383609768 0.0122088243646694 0.832950061008755 ACACACAGCTTCAGAAGGCTGATAGCCCCGGGGTGTGTCTCATCTTCTGAGGCAGAACCTACCTGAGTTCTGTCTTTATCTGTTTTAGCTCTCAGGGGCTGTAATTCAGAGACTGCAATTCCACAAAAGAATCCTAAACCCATGTGAAATAACCCTGAAATATCTTGCCCTTTGGGACAGACTTGAGGGCAGGATAAACATATGGCCCAGGTGAACACATGAGAATTGTAGAAAAAAATATCTGAAGCAACTATAACATATTACTAAGTCTGGTTGGACTGTAGAGACCATTAACTGTGTCAAGAGCAGTCACAGAAACCTTAGAAATAAAGCCAGTGCTAAATTCATGTGAACTGTAAAGGCATAAAACATGAAAACATTCATGATAGGATGATCAGAGAAAGGCAATAGAAAACACTTATCTGCACTTCAGCAGGGCATGGAACAAAGTCTCTACTTCACTCAATAAACAACTGTCGAATACTATACTCTGCAAAGCCCACCTTGATATGTAAATAGCCCATTCCATCCATGCTTCATACAGCACACTCACCAGCATCTGCTCACATATTTCCAACAGTGCCC TCONS_00226457 s 3' 79881 TCONS_00226457 s 3' 79881 EMBV3_18623 TCATTCAAATCTCCATGACGAAGCCCTAAGGAGTCCAGGAAGAAAGGAGTAGAGGGGCAG Gene BVV0102_126711 + 1 EMBV3_14649 GK000014.2:2293396-2301586 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054146 1 XLOC_031955 NonCoding TCONS_00054146 XLOC_031955 NonCoding NonCoding - 14:632754-633635 - TSS39823 881 1 TCONS_00054146_1 36 0.30533484676504 1 0 0.00154592808751462 5.13256769870586e-05 6.6671454646987e-05 5.10565726388185e-06 0.000111369706053923 0.00024385083482633 5.26193419635488e-05 4.59033655516513e-05 0.000176592077604925 0.00293238722409138 0.000707872756171944 0.00127091391335698 0.000841183502049305 0.000983725524537984 0.000771989087276517 0.00487288798227137 0.000610550483823116 0.0196590540373616 4.06976182636799e-06 5.68772938325574e-05 3.44577927359288e-06 0.00220905820540651 0.00174233582246591 0.00242193585252357 0.000202731130723959 0.000409776537560464 0.000472692951195377 0.00158733294678468 0.000489293136344245 0.00100724407966801 XR_139643.2 LOC100847137 PREDICTED: Bos taurus uncharacterized LOC100847137 (LOC100847137), 1e-119 434 81.08 0.502837684449489 0 noncoding TTTACTGTTAAGGCTAAGTGAACAAGGCAAGAGAGAAACCCCAGAATTGAAAAGCAATTGACGGTTTTGAAAGAAACATGTGCAGGTGAAGCTCTCTTCCTTTTTGAGAGATGGTTAAATGCAAAATCTTGATTCAACACATATGACTTTTGTGCACTTTCTTTCAAATCTCCATGACAAAACCCTAAGGCGTCCAGGAAGAAAGGAGTAGAGGGGCAGACAAAAAGAGCAACCTTTCCCCTTGGTGCCATCGCAACCAGCTGCTTAGTTCCTTCATCTCAAGGACTATCATCTGGGCTTCTCTGGTTTGTCTGATTCTTGTTTCGGGGACCGTTTCTCGTCACAAGGCTGTCAACAGTGGGGGTGGGGGTGTGTGTGTGTGGGGGGGGAGCCCTTCTTTCCATTCCACATGAGACCCAGTGGACAATCCAGGCCCTGCCCACTGCATTGAGTGTGCAGCAACAATATCAACGGTAATGCCGGTGAACAATGCGTATTCCTGGAATCCACTCCGTTGACTACTGACTGTGTGTGGTGGTGGTCTGGAACCTAGACCTGGAAGCTTTCTGGATGATTGCAAATGACACCAAAGTCTGAGGACGATGGAAGATTGCCGGGGTCCTGCCCCGGCTGATCCAGGGTATTCGAAGCGGGGACGGTGTCGGCGACCTATTTATTTATTTAAATATTTTATCAAAGGATATAAAGAGTAATAGGATGAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCTGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCATTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGG TCONS_00050930 TCONS_00050931 . 3' 95370 TCONS_00050930 TCONS_00050931 . 3' 96250 EMBV3_05606 CCACACCCGACCCTAATGCTTAATAAAAAGCCGTGACACCACAGTGCAGACCCTTCCTGA Gene GeneID:532677|KLK6:NM_001101140:301_cdna Constitutive 1 NULL GeneID:532677 18 GENE KLK6 NULL kallikrein-related peptidase 6 EMBV3_14165 TGTCCCCAAAGAATGGTTTCTGGGCCATTAGGTTCTATGAGGGGGAGTATTGGGCCCTCA Gene GeneID:615257|LOC615257:XM_002697375:389_cdna Constitutive 0 NULL GeneID:615257 23 GENE LOC615257 NULL similar to enterocytin EMBV3_01679 TTGTCGTAAGGTATCAGTTAGGTCTTGGATGAGTTGGAGGGTGGAGACACTGGCCTGCGT Gene BVT0102_116603 - 0 NULL GK000010.2:17082746-17516708 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012869 TCONS_00012871 TCONS_00012870 TCONS_00012873 TCONS_00012868 TCONS_00012872 1 XLOC_007941 NonCoding TCONS_00012871 XLOC_007941 NonCoding NonCoding - 10:17379393-17383742 - TSS9659 1676 3 TCONS_00012871_2 67 3 0.615225390984361 0.000254697627143971 5.53941770026819e-09 2.34199336559807e-06 0.000297277061936917 3.52692522716249e-09 0.00016693148263367 0.000173971522597762 1.80602152738941e-08 1.18407145318105e-09 7.36145751265104e-06 1.36981390489473e-29 1.37752261299102e-05 8.9020717571539e-05 0 0.000635222986059167 6.08396356402309e-32 0 0 0.000346028781648587 0.000276751377565913 7.788315520922e-05 0 0 0 6.79518755345638e-12 0.000939420889963512 3.27466322748273e-10 0 0 0 XM_003583439.2 LOC100847456 PREDICTED: Bos taurus biogenesis of lysosome-related organelles complex 1 subunit 3-like (LOC100847456), mRNA. 4e-09 68.0 70.24 0.0859188544152745 0 noncoding 1 1 1 1 -0.0513145379072105 0.63649400159947 0.0213003765241991 0.8001015427029 CTCCTCCCACAGAAAAGCCCAAACACTGGATTCAGGAATAAAGAGGAAGAGGGAACTGCTTCCAGGTGGGGAGACTGGAGAAGCCTTGGGTTACTGTGCTGCATGGATGCGAGCCTCCCTGGAGTGAGGCTGCACTTCCTCCTGGCTGAAGACTGAGCTCAGCAGGACTCCAGCCCCACCCTTCAGATAAGCCAGGAACACCCACACCTGGAGCTGCCCCTGAGCCAGCAAGCAGCCTCACAGCCCTGGTGTCATTGGCTGAGACCCAGGAACCCTCAGGGAGAGCAGCTGCTCACCACATACCACACATCCTGCACACCAGCATCCCTAGTCAGACTGAACCAAAAGCTCCACACAGGGGATCACCGCCTACCAGCTCATAATCTGATTCTCCAGCCACCGCACCCACCACCCTCCTTAGTGTGTCTTCTCAGTCCTGGACGCAGGCCAGTGTCTCCACCCTCCAACTCATCCAAGACCTAACTGATACCTTACGACAATTTTACTGAAGGTGGAAACTAATTGCAACTGCTACCAGATGTTTTTGGTCTTAAAGCTCATAGTCAAAATCTGACCTAGAGTCTGCCCAGCTCCTAGCAGGATTCCAGGTAGGGGGAACAGTCCTAGGAGTCTCCAGGAGTCTGCACACCTCAAAGACCACTCATTTTGGCCCCAGAGAGAGAGAAGAAAATCCGCCTCTCCCCAGTGCAAAGCCTGTGTCCTTTATGGCCTCGGGACACACCTCTCCTTTTGGACAGCTCTGAGCCACACACATGTGGCCTGAACAGCAGGGCCCAGATGTGACAATCAGAAGGACTCTAAAATACAGCACAAATGAATGTATCTGAGGAAACAAAAACACAACAGACTTGTGGTTGCCTGGGGGAGGGAAGGATTGGGAGTTTGGGATTATCAGATGCAAACATACACAGGATGGGTGCTGCTGTGCAGCGCGGGGAACCATTCAGGATCTTTAATAAACCATAATGGAAAAGAAAAAAAAAGAATGACTTCCCGTTTTCGGAATAACTCTGTTGGGTGAGGGAAGCTCAACAGTAACTCATGCCCAGTTCCACGCACAGTCACCCCGCCCCCAAGAAGATCTGTAGGTTTGGGGGAACGCAGCTCCCACACCTAGTGATGCCTGGTTCTTGGCTCCAGATATCTCGGGAGAAAACGTAAGAGAAGAGGACAGGAACAAGCCACTGTGAGAATATCGTAAATCCAGGTGTTGGATGGGGAGTGGGGTGTAGGCAGGATCCTAACTGCACGGGACCAGACTCTCCTAACGTACCAGGTACAAGCCAGAACCTTGCAGGCTGCAGATGCTGATGCTGGTACACTTCACCCATGTTTCAGAGATTCCCCAAGAAAAATGGACAGGCACTTGCTGCCCTGATGAAGAGGTCACTCCCAGAACTGTCCAAGAGATGAATTCCAGTCTTACACTACACTGCTTCAAACGTTCACAAGCCCCCAGAGGAGTTTTTCCAGCTCCAACTTTATTTTAAAATCCAGGCTCTACCTACCGGGTACCCCATTATAAACATGGAGAATTGAGAAACCCCTCATCAAAAGTAGGGAGGGAAGAGGCAGTCCACCAAAATTCTTTTGTTCTTCATCATCTAGCTTTTTTCCATCTGGGATTCTCCTCTGGATCCCAATCTATCCATCAC TCONS_00016160 TCONS_00016161 TCONS_00016162 TCONS_00016163 TCONS_00016164 TCONS_00016165 r 3' 131847 TCONS_00016160 TCONS_00016161 TCONS_00016162 TCONS_00016163 TCONS_00016164 TCONS_00016165 r 3' 136195 EMBV3_28587 AGACACCACAGAAGATGGACGAAGGACAGCGAGAAGGGGATCCGGAGATTTTGTTGACCT Gene GeneID:781181|UPF2:XM_002692050:36_cdna Constitutive 0 NULL GeneID:781181 13 GENE UPF2 NULL UPF2 regulator of nonsense transcripts homolog (yeast) EMBV3_40328 TATCTAAATGCCTGATCCTCGCCATTCTCCCCAACTAGACTGTGAACTTCTAGGCAGCCC Gene BVT0102_227119 + 0 NULL GK000003.2:85167848-85974295 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170460 TCONS_00170461 TCONS_00170458 1 XLOC_103589 NonCoding TCONS_00170458 XLOC_103589 NonCoding NonCoding - 3:85590522-85610994 - TSS127362 3526 2 TCONS_00170458_9 85 0.445263754963131 3 0.827902887010893 0.00116901506588297 1.49006392306626e-06 0.000909566306841753 0.000617915457923531 0.000216540332669238 5.44945853652709e-07 0.000189669708983099 8.20505414617588e-07 1.15458047910856e-06 6.44674231601105e-07 0 1.36342168257895e-12 4.67540095548026e-07 1.9611773733336e-12 6.86730053543657e-07 0 0 0 0.00102652970082701 0.000861139006587701 0.000344345900463141 2.06311411079876e-07 0 0 0.000782620785579024 0.000240612119034655 0.000378537228378529 0 0 0 XM_003582318.2 FAM184B PREDICTED: Bos taurus family with sequence similarity 184, member B (FAM184B), transcript variant X1, mRNA. 3e-109 401 87.93 0.0893363584798639 0 noncoding 0 0 0 0 0.281821814335601 0.353357348348522 0.035586832054005 0.46844890136907 CTTAGTCTCCCCCAAGGAGCAAAGACTGCTGGCACGTCCTTCATGCTGTCTGCTGCACACAGTGGGGTGTTGCTCCAGGACTTTTCTTCAAGGTTTAACAGAGAGAAAAGGGGCTCCAAGCCATTGCTGACAAATGAGCTTGTAACATCTCGACAGCCAACCCAAGCTAATATATCAGTCCTGGATATTCATTGGAAGGACTGATGCTGAAGCTGAGACTCCAATATTTTGGCCACCTGATGTGAAGAACTGACTCATTGGAAAAGACCCTGATGCTAGGAAAGATTGAAAGCAGGAGGAGAAGGGGACGATAGAGAATGAGATGGTTGCATGGCATCACCAAAACAATGGACGTGAGTTTGAGTAAACTCTGGGAGTTGGCGATGGACAGGGAGGCCTGGCATGCTGCAGTCCATGGGGTTGCAAAGAGTAGGAGATGACTGAACAACTGAACTGAATATATCAAGTATTAGTAATATGAAAGCTGTCATATATTGAATACTTTGTGTACTCAAGCACTTTGTATACTCTGTTTAATTCTAACCACAAACCTTGAAGTACATAATATTAGTGTTCCTATTTTACAGAAGAAGGAACAGACTTAGATTAAAAGACTTTTTTGGCTTCTTGGTATAGTCCATGTGTATGTGGTGGCATAACCAGTCTTCAAATCTAGGCTTGTCTGTCTCCAAAAGACATGTTTTTAATCATCATTCTGGTTTATAGCAGATGGACAGTAGTCTTTGTATGTGGGGTAAGAAAGGGGTAAGAAAATTGGATAGAGCTCATGCTTTCAGGTCTGGCAGAACTGGATTGGGGTTTGAGTTTTTGGTTTCCTACCACTGCGATCCTGGACAACTAATTTAATCTCAAGGAATTGGTTTCTGTTCAAATGGGATAACTTAAAACCATTCCATTATGAGTAGGAAATGAGATGTTTTTAAAAGTCTAGGTCTTTGCTTGGTGAAACTATTCTGCAAATAATTTATTTCTCTTCTTTCAATCTTTTCCTCTTACCCTTCTGTTTACTTGAAATGTGGTGGCAGTAAATGACTGTTTTTTAGTACACATAGGTGCACTCCCCTTCACACTTTAATTGATCCCCCTTCAGACGTAACAAACTACATGGTCATGCTCTGGATATCGGTAGCATTCTCCTTACCTTCGTTCTCTGCATCCAGTGAAATCTTTCCAGTTGCAAATGTGATTGCATCATTCCTTTGCTTAAAACTCCTTACTTCATTGCCCTAGAGATAAAATGCAGCACCTTCACCATGGAGTGTGAGGCCTTTGATGATCTAAGGCTGCTGCATCTGTATCCCCTTCTCATACTCACCCCAGACTTTCATTCTAAGTGCTGTTCATAGCAAACTAACTGCAGTTTGTTGAAATATCTTTGCTCTTTATTGCTTCTATGTCTTTGCAAATGTCTTTCTGTGCCTGGAAAATTTTTCATCCCTGTCATTGTTTATCTATCGATAGAACCCTTTTCTAAGTATAGGGAAACTTCCACTTTGTGATCATTGTGGGACAGATAGTTTTACTGCGTAGGGGATGAGATATTGTTGGTTCATTACAACCCTCTCTGTAGCTAAGACATATGCATATGATTTAGGCTCTGTCAAACATAATTTGGCTCAGGGAATTGTGACACAAGTAGGAAGGAACAGGCATTGTCTATTAGTTTCTGACAGAGACAGAAACAGTAGAAGCTTCAAGGTCAGAGAGACTGAGTCCAAAGACTCTCTACCTTAGTTATTAGTTATGTAACCTTACTCTAGCAAAATAACTTCTTTACATCAGTTTCTTCATCTCTAAAATTGGCTAACAATAGTGCCTACTTCAAATAGTGCTTGCAAAGATTAAACATAACATACAGTATGGTTGAAACAATGCCCGGCTCATGGTATCTGCTCAAAATGTTACGTCTTATTACTATTGTTGTTGATAATAGTAATAATCATAGCAAGGAGATCAAACCAGTCAATCCTAAAGGTAATCAACCCTGACTATTCACTGGAAGGACTGAAGCTGAAGGTCCAATATTCTGGCCACCTGATGTGAAGAGCTGATTCATTGGAAAAGACCCTGATGCTGGGAAAGATTAAAAGCATGAAGAAAAGAGGGAGACAGAGGATGAGATGGTTGTATGGCATCATCAACTCAATGGACATGAGTTTAAACAAACTCTGGGAGACAGTGAAGGACAGGGAAGCCTGGCATGCTGCAGTCCATGGGGTTTCAAAGAGTTGGACATGACTTAGCGACTGAACAACAACAACAAAACTGAAAGAAGAAGAGTAGAAGGAGCAGGGGGAAGTGGCGGGGGAAGAAGAAGAGAAGCAATAATGGTAAACTACTTTCTGTAGCATTAATTTTTATTTTTCATGCATCTAAAAATTGTGACCAATAACATTTCCCTCCAACTAGATTAACCTGGGCTCAGGGTTAACATCTAACTTAAGACTTTTTTTTCCTCCCAGAAACTTTTCTTGAATCTACTGCTGCATTAGAGACCACTGCTCTGGACTCACATTTTGTTCTTATTAGGAGCAGAACACTTAGCATACTTTATCTAAATGCCTGATCCTCGCCATTCTCCCCAACTAGACTGTGAACTTCTAGGCAGCCCTGGCCACTCCCTAAACCTTGTATCCCTAGGATCTAGTGTAGGCAGTACCTCGACACTTTGTATGTGTTCAGTAAACATTTGCTGGATGAATGAGCAAATCTCCTGCCACCCTTTGAGATCCTGCCATGGGAGAGTCAGCCAAACAAGGGAATCACTGATTTCTATTCACATGCTCCAGCTCTTCCTCTGGGTTCTCTCCCTGTAACCCCATTTAAGATAATGCCAATCAACATTCATATCTACTCTAATGATCCTGAAATGTCCTTGACAATCAGTATATTTCATTGCTGAAGTGCTCCTGCCTCCCAGGTTTGGTTTAGGAAATGGAACTCTGCCCAGAGATTTGATCCCAATCAGTGCTATTGTGCTTCCCTTGAAGAGCTTCTTATTAAAGTCAGGAAGATGCAAAACAGTTCTCCAAATCTGGGAGTTCAGTGTGTAATAAGAAGAAACTGGGTGATCCCCTTTGTTCTTTTTTGAGTCAGTGACCTGAGGTAACACCATGCTATCTTCTTTTAACCAAATAGGATTACTTGCTGTTCTACTTAGATCTGGGCTGAACATCTTCTTGCCTTTGTGTATGCTGTTTTATCAGTTTCCTGTGCTTCCTCACTAGTTAAGGTTTAAAGCCAATGACCTAGCAGGTCATTCAAAGCTTCTCACAAATAGCCCCATCTACCTTTCCAATATTATTCCTACCACATCCTATTAGATCCTCTAGCCTGTAGTGCGGAGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCAGGAAGGTCCCATGGATAGAGGAGCCTGGTAGGCTGCAGTCCATGGGATCGCTAGGAGTCGGACACGACTGAGTGACTTCACTTTCACCTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCC TCONS_00173925 r 5' 418944 TCONS_00173925 r 5' 418944 EMBV3_20373 TTTTCCCCCCTTTTTGAAGGATAGGGCAGTGAGGTACCTATCACTGTGAGTTTGGGGGTG Gene GeneID:527786|SLC25A25:NM_001038145:142_cdna Constitutive 0 NULL GeneID:527786 11 GENE SLC25A25 MGC127973 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 EMBV3_03320 TGGTCCGCCACCAGGCTTCTTTACCTTCAGCAAGTTTGCAGCCGTGAGGTTACACAAAGT Gene GeneID:100296900|LOC100296900:XM_002686768:73_cdna Constitutive 0 NULL GeneID:100296900 4 GENE LOC100296900 NULL hypothetical protein LOC100296900 EMBV3_33791 ACCAATATACAGATGTGGTAGAAATTGTTACACCAGACACCATGCACTCCAGGCGGGCTG Gene BVV0102_187819 + 1 EMBV3_22505 GK000004.2:83247970-83276465 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182229 1 XLOC_110799 NonCoding TCONS_00182229 XLOC_110799 NonCoding NonCoding - 4:83260778-83261308 - TSS136213 415 2 TCONS_00182229_1 57 2 0.219281663516068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000190927205501254 0 0.000665059473566573 0 0.000259930910611065 0 0 0 0 0 0 0 0 0.000140374330351633 0 XR_242089.1 TARP PREDICTED: Homo sapiens TCR gamma alternate reading frame protein (TARP), transcript variant X3, misc_RNA. 1e-78 297 78.43 0.857831325301205 0 noncoding 0 0 0 0 0.0245143656285782 0.823745414284252 -0.00273918349659305 0.968372908061696 CTGTTCCAGATGTTAACTCTGATTGTCCTCAGGGCTTTGTGTGTGTATTGTACAGGTCATCTAGAACAACCTCAAATTTCCAGTACCAAAAAGCTGTCTAGAACAGCCCGCCTGGAGTGCATGGTGTCTGGTGTAACAATTTCTACCACATCTGTATATTGGTATCAAGAAAGACCTGGTTAAGCCATACAGCGCCTGCTACACATTTTCTCTAACAACGCCATCAAAACGGAATCAGGCATTCTGTTGAGCAAGTTTGAGGCAGATATGATACCCGAAACTTCTACATCGACCCGCACTGTTTACAATGTAGGGGAACAAGACTCTGCCACCTATTACTGTGCCCTCTGGGATGTGCACGGTAGAAGACATTACAGTCACGTCATTCAATAAATGATCCTTGGGTTTTCATTCA TCONS_00182225 TCONS_00182226 TCONS_00182227 TCONS_00182228 s 3' 11838 TCONS_00182225 TCONS_00182226 TCONS_00182227 TCONS_00182228 s 3' 11838 EMBV3_27177 CTGAACCAGATTGCAGAGTCATCCAGGGCTGTAACAGTGAAACATACCACAGGGAAGAAG Gene BVT0101_024160 + 1 EMBV3_19592 GK000001.2:128221734-128268870 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005166 1 XLOC_001196 NonCoding TCONS_00005166 XLOC_001196 NonCoding NonCoding - 1:128261152-128264221 - TSS2552 433 1 TCONS_00005166_1 60 0.66743648960739 3 0.859843546284224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.26614439957003e-05 0 5.47748583975559e-06 0 0 3.32167870105544e-05 0 0.000257067668924814 0 0 0 0 6.76575969624455e-05 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 4e-52 208 76.68 0.644341801385681 0 noncoding AGAGACCTTCTGGGAGGCTGTTGTCACTCAGATGAGCAGTGGTGGTGAGAGCCAGACAGAGAGGAAGTTCACCTCTGAACCAGATTGCAGAGTCATCCAGGGCTGTAACAGTGAAACATACCTCAGGGAAGAAGAGAAAAAAAGGACTTCCCTGGCAGCTCACAGGGGTAAAGAATCCACCTGCCGATACAGGAGACATGGGTTCAATCCCTGATCCGGGAAGATCCCATATTCGGAGAAAGAACTAAACCTGTGCACCACAGCTACTGAGCCTGTGCTTTGGAACCCGGGAACCACAACTGAAGCCCTCGCGTTCTATGGCCCATGCTCAGCGACAAGAGAAGCTCCGGCAATGAGAAGCCCACGCGCTGAAACTAGGGAGTAGCCCCCGCTCACCACAACTAGAGAAAAGTCCATACAGCAGGGATGAAGA TCONS_00005167 s 3' 7430 TCONS_00005167 s 3' 4650 EMBV3_19543 TTCCACTTTCTCCGCTGGGTCTCCAGAGCTGAGAGGGATGAGCTGCATGCAAAGGCTCAT Gene BVV0101_024122 + 0 NULL GK000019.2:18824302-18850764 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095466 TCONS_00095467 TCONS_00092525 TCONS_00095470 TCONS_00095471 TCONS_00095468 TCONS_00092524 TCONS_00095472 TCONS_00095469 2 XLOC_057721 XLOC_056911 Coding TCONS_00095466 XLOC_057721 Coding Coding LOC100848380 19:18842690-18897172 j TSS71163 10433 1 TCONS_00095466_2 535 0.160835809450781 13 0.808740661882124 0.00104038132441564 0.000602718179129237 0.000240570176001747 0.000507336947433974 9.7632625600953e-35 0.000114245722472728 0.000647364114417141 0.000342254670450941 4.58670834138183e-05 0.000280410462198868 5.9025531909632e-06 1.40910154041662e-10 4.46327745140032e-06 1.65229995548719e-10 2.4216280050092e-05 0.0105190317428802 0.00353300316471347 0.00941101733596765 0.000221432376018434 0.000205139676817795 0.000159176746060178 0.00361373607359796 0.00308065155547745 0.00256000393308049 2.70585392975204e-05 2.89036181518616e-34 0.000561059791981264 0.000246845359042154 0.000753240223769804 0.000919578408144151 XM_003583539.2 RAB11FIP4 PREDICTED: Bos taurus RAB11 family interacting protein 4 (class II) (RAB11FIP4), mRNA. 0.0 4194 100.00 0.222754720598102 NM_032932.3 RAB11FIP4 Homo sapiens RAB11 family interacting protein 4 (class II) (RAB11FIP4), mRNA. 0.0 2415 84.30 0.212211252755679 TCONS_00095466_2 sp|Q86YS3|RFIP4_HUMAN RFIP4_HUMAN Rab11 family-interacting protein 4; 0.0 966 93.92 0.981308411214953 1 coding 0 0 0 0 -0.0519149311343864 0.726326885515256 0.00575920632178567 0.910771731368685 GCAAGGAATGACATTCCAAGCAGAGGGAGCAACAAAGGGCAGCGAGGTGCCAGACCCCACCTTTGCTGATGGCGAGCTCCTGCCCACAGAGCCAGACTTCTTTCCCGAGGATGAGGATGAGGCCATGACGCTGGCCCCACCCGAGGGCCCCCAGGAGTCGGACATGGAGGGCCCCATGGAGAGCACTCGGAGCCTGGAGGGGCCAGTTGGAATTCCCGCCGAGAAAGATGCGGGTCTAGGAGGCCTGTTCCTGCCCGAGGACAAGTCCCTGGGCCACCCTCCGTCCGTGACCACGTCAGACCTCTCCACGCACTCCACCACCTCGCTCATCAGCAACGAGGAGCAGTTTGAGGACTACGGGGAGGCGGATGATGTGGACTGTGCCCCCAGCAGCCCCTGCCCGGATGACGAGACCAGGACCAATGTCTACTCGGACCTGGGGTCGTCAGTGTCCTCCAGCGCGGGGCAGACGCCTCGAAAGATGCGGCATGCATACAACAGCGAGCTGCTGGATGTTTACTGCTCTCAGTGCTGCAAGAAAATCAACCTGCTTAATGACCTGGAAGCCCGGCTGAAAAACCTGAAGGCCAATAGCCCCAATCGAAAGATCTCCAGTACAGCCTTCGGACGGCAGCTCATGCACAGCAGCAACTTTAGCAGCAGCAACGGCAGCACCGAGGACCTGTTCCGGGACAGCATCGACTCCTGTGACAACGACATCACGGAGAAGGTGAGCTTCCTGGAAAAAAAGGTGACAGAGCTGGAGAACGACAGCCTGACCAACGGGGACCTGAAGAGCAAGCTGAAGCAGGAGAATACACAGCTGGTGCACAGGGTGCACGAGCTGGAGGAGATGGTGAAGGATCAGGAGACCACGGCCGAGCAGGCCCTGGAGGAGGAGGCGAGGCGCCACCGCGAAGCCTACAGCAAGCTGGAGCGCGAGCGCAGCACGGAGATCGAGCTGCTCACCACCAGGGTGCAGCAATTAGAGGAAGAAAACACCGAGCTTAGAACAACGGTGACTCGGCTCAAGTCACAAACAGAGAAGCTGGATGAGGAGCGGCAGCGCATGTCCGACCGGCTGGAGGACACCAGCCTGCGGCTCAAGGATGAGATGGACCTGTACAAGCGCATGATGGACAAGCTGCGGCACAACCGCCTGGAGTTCCAGAAGGAGCGGGAGGCGACGCAGGAGCTCATTGAGGACTTGCGGAAGGAGCTGGAGCACCTGCAGATGTACAAGCTGGACTGTGAGCGGCCGGGCAGGGGCCGCAGCTCGTCCTCCAGCCTCGGCGAGTTCAACGCCAGGGCTCGAGAGGTCGAGTTGGAACATGAGGTCAAGCGGCTCAAGCAGGAGAATCACAAGCTGCGAGATCAGAATGATGACTTGAATGGACAAATCTTGAGCCTCAGCCTCTACGAAGCCAAGAACCTCTTTGCCACCCAGACCAAAGCCCAGTCCCTGGCAGCGGAAATAGACACAGCCTCTCGCGATGAGCTCATGGAAGCCCTCAAGGAACAGGAGGAGATCAACTTCCGGCTGAGGCAGTACATGGACAAGATCATCCTCGCCATCCTGGACCACAACCCCTCCATCCTCGAGATCAAACACTGAGACCAGGGTGGCTGGCTGCAGAGCAGCCGCAGGACCCCCAGACCCCAGGATTCAGGGGCAGAACCCCGCTCGAGGATGCGGCCCGGGCCGGGCCTCCCACGCACACTGTAAATGTGTTTCTGGCCACCGCTGTGTAATGTGTACTGGTGTGTATGTGGGGAGGCCGTGCACACAGCAGAGCGTGAGCCTGGGCAGCAGCCGTGGCGCCATCTGCGCCGTCAGCTGTCCTTGTGTTTTGCGGTCCCTTTGCGAGGGGCAGAGGGTCGTGGAGGTGGGCGGGGGCGAGGTCAGCCGTCAGGAGTTACTGTAATGACGAGAGCTACGGGAAGCTTGCATTTCAGATACTGGACAAAATGATTCTACCTCTGGGGACAAGGATTGAAAAGCATTCTAGTGCGACAGGCTCTTTGACCCCCATTCCTGTTTCCCCCTGGGAGCGGGGGCAAAGTGACGACCCCTTCCAGGAGCTTGAATGCCTCACCAACCTCTTCGGCCACCTTTCAGGCCCAGGTGCTTGAGTTCGGAGAGAAAGAAGGAGGTGGGGGAGGGGGGACGTGTCGGGGGTCCTCACAAGCCCTTCCTGCAGCCAGCAGCCCCCTGTGAGGCTTGTGCACAGTATATCCAAAGGACTCAGGCCTACAGGGGAGCTGGAGGTGCGGGGGGTTGGGGATGGGGACAGCCGTCATCCTGAGGGTTCTTGGCACTTTGAGAGTTCTCCGTAAACCTGCCCATCCCTGCTCACCTACCTCTCCTTTCCTGTCTTGGTTTTGTTTTTTAAGACCATGAAAAGCAAGCGGCATTCACTTGGGTGTACATGAAGGATTCAAAGAAAAGGGAAGCGGGTGGGGACAGTCTAGGGTACATGTTGACATTGGGCAGCCAGAGACACGGTCACGTCCCTGTCAGCCTCGTTTCCGGGGGCTGCCTTGTAGGAGAGAGGCGTGGATGGACCCTCTCAACAGCTCCCAAGGGCTGGGAGGGGGCCTTGCTCACCTGTCCCTGGTCACGGCCTTAGGTTTGGGTTTTCAGAATCCATGCTCTGGGTTTGGCTCTGCCGGACAGTGAGGCCCCTCTGTCCCAGCCTCTAGAAACATGCCTGTATTTGGGTCTCAGCTGTGCTGGTGTGAGAGACAGTCAGGGAAGCTGCAGGGAAATTTTAGTCTTCCATTCTGGTGGTGGTGGTTGGTGGTTTAGTCTCTCAGTTGTGTCCAACTCCTTGCAACCCCAAGGACTCTAGCCACCAGGCTCCTCTGTCCATAGGATTCTCCAGGCAAGATACTGGAGTGGGTTGCTATTTCCTCCTCCAGGGCATCTTTCTGACCAGGGATCAAATCCACGCCTCCTGCCTCTGCAGGCAGATTCTTTTACCACTGAGCCACCTGGGAAGCCCAGTTACAGACTTTAAGGGAACAAAAAGGTCAAAAGACATAGCTATGACCAGGCCATGGCTGTACTTGAACCGCAACAGAAACAGTAAATCAGTGCGGACTCCCAGTTCTGTTTCAAAGGTAAAGATCAGCCTGGTGACACAGTGGAAACACCCTCTGGATCTTTCACGTGATCTTTTGTTCTAGGCGGCTGGGAGCAGATATGGTACTCTTCTTTGAGTTTTCCAGTTTGTCTCAATTTTGTGTGGCTTGTGAACCGTATCCTTAATCCAAATACAGATAAATGCGCATGGTCTTATTTCCAACATTCTCCCCCCTCCACCTGCCACTGCCGTTTGTTTCCTTCAGCACTTCTTCTATGAAAGAGAAGGCTTGGGCACGTTGGGGACACATGTGTGCAGAGGAGAGAGGGCTGGGAGGGTGAGCAGGGACCTGGGGATTCGGGTGTGTTCCCAGTGACAGAGCAGGGCTGCGGCCAGGACTGGTCTTCATCCCGTTCCAGTCACTCTCGTTGGATTTTGTGACTTCTGTTTAAGCATGTGCATGGATCTGATCCCAGGACTTTGGGGCCACCCGCACCAGGAAGACGAGGATGGGGGGCGGGGCGTCAGTCTCCTGGGAGTCTCTCCACCCCGCAGGACGCTGGTCTCTTTGGGGCCCCCAGGGGTCTAAGCAGAAGCGGCAGTGGAAGGAAGGGATGGGAAGTGGGTCTCTTGAGAATTTGCTAAGAGGAAGGAATGGCATGAATGAAGACCGGAAAGCTGATGACTCACGCTGCGGCTTGGGTCTGGGTTTTATATGAGAAGGCATCCTGTAGAGAGGCCAGCCGGATCCGGGTCCTGGCCCATGGGGCTGGGGCTCGCCCTGGGGGAGGAGCATTTTATGGGTGATGGTGTATATGCTCTTTAGCCGCACTGATGTGGAATTCCAGGGGAGGCCGCAGAGGCCTGAGTTTATAACAGAGTCAGAATGTGGCATGGAATCTCCACCCAGGGGAAAGTGGGTGGAGAAAGCTGTCAGCCTGAAGGGGGCTCCAAGGGAGCCGACTCCCCCAGGAAGCTCTGGTCAGAAAGCCGCCTCCGGACCTGGTCTGAGAACCGGGCTGACTTTAAATTGAGGCTGAGTTCCATTTAACACATGCCCCAAGTTAAATCCAACCTTCTTCAGCCATAATACATCCAGTAGGCTTGTTCAGATCCTGTAGCTTTTTAGCCTGAGAGGGGGCAATGCCACAGGGGTTCCAAGCCACAGCCCCTGTGCAGGTTCTAGAACGGGGTCCCGGTGGGCAGACCCTGCTCCCCCTGCGTTTTCTCCTGTTTCCTGGTTGAAGGTTGTGCTTTTATCTCTCAGTGGTGGGGCTGCTGGAGAATATACAGGATTCCCCCGTGAAATGTGAATTTCAGGCAAAACAAATAATTTTCAGTAGGTGTTCCATACAATACTTGGGATCTATGCTTGTCTGCAGGTTTTAGAGGTGGTTTCGGGGTGAGGGGAGGGGGTTCTGCTGCAGGCTCACATTTGACATGACCCTGGGCAGTCCTCACATTTAATCAGAGCCCCAGCAAAATTTGTTGAACCAGCAAGTCAGTGTCTAAACACAAATTAACTTTGAATTGCCAGAGTTAGATAAGTTATTTTAAATTTGCAGATTCTTTGAGAATTGTCAAAGAGAAATTATCCTTTATCTGTAAACTCCTAATCTATTTCTGACCCGTTAAAAACAGAGTTTGACAACCTCCCAAAGTACCCAGACCTGAAATAGTAATAGTGATTCTCAACGTGGGCTGTGTATTGGAATCACTGGGGAGCTTTTTTTAAATGCTGCTGCCTGGGCCTCCAGAGATTTGGATTCCATTGGTGTGGGTATGGCCCAGGCACCTGACTGTTCAGAGAGCTCCCCAAGTGATGGTAATGTGCAGCCAAGGTTGGGACTTCTAGGAAGCGGTTGGCCAGAGGCAGAGAAAACCTCTGCTGGGCTTGTTAACCTAGGTGCTAGGTAAAATTGAATTCCCTTGCTGAGACGGTGGCTTTTCCTTTAATGATGTCAGACGGTGAGACGTTAGCAGACGCCCTGACACCCACAAGGGGAGGCCAGATGCCTTCAGGAGTGGGTAGATCCAGCTGTTCTCAGGAGCCTGGAAAATGAAAGTCGCTCAGTCATATCTGATTCTTTGGGACCCCATGGACTATACAGTCCATGGAATTCTCCCCTTCTCCAGGGGATCTTCCCAACCCGGAGATTGAACCCAGGTCTCCCACATTGCAGGCGATTCTTTACCGGCTGAGCCACCAGCCTAGGGGTTAGCAAACCTGAGTGGGCAGGTTGGTCTCTGCCTGTTGCTCATGGAGTTGGTGGGTGGCAGGTGTTGGGATGTATCAGTCACAGGCCCAGTGATTAAAGCGAGAGCAGAACAGAGTGGGGGTGGGTGCTGAAAGCAGCCCCAGAAATAGCAGCTACCTTCTGGCATAGCTGAGCCCAAGGCGATTCCCGCTTTCTGATCTGTTTTCAGGTTGGGTGGATAAAGGTCACCACACCAGCATCCCTCCCCAGCCCTGGAGGCTCCAGGCTCTAGTCTGCTGAACTCCTGGCCCAGCCAGGTTCTGGGGATCAGGAAGGCAGGCTCTTTTGTTCCAATGAGGGACTTAGTAGCAGGGAAGAGACCCGCAGGGGCCAGTGGGGCCTGGTGGACCAGGGAGAAATTAAGTCCTCTTTTCGTGCTGCATAGGTGTGTGGGTTTAATGCATTATCAAATTTATAAACCTAAGAGCTAATTATAGACGCGAACAGAACAGGGGATGTGTTGGGATGGTTGCGGTGCCCAGGCAATGACTTTGTTTGCCTGGAAGATCTACAGCGACTCTCTTAAGGGCTGAGGTGGGTTGTAGACTGAGGAGGGGGCAGTGCAGAACTTCAGAACTTTCCTCTAGGGCAGCCCCTCTCCTGTGATGCTTCAGGCTGGTGAGGGGCAACCTGGGTGACTTTGAGCAAGTCCCTTCCCTCTGCAGACCCTGCCAGCCCATTCTGAGCAGGCCCGAGAGTGGGCAGGGAGCACGAGGGGCGGGAGCCATGGGCCTGCCTGCCTGCCTGCCCGCCCGCCCGCCCGCCCGCCCGCCCTTCTGCCACACTCCTCTTTCTTGGGGAAACAGGCTGCCTTCTAGAAAGGTCTGTTTCTAAAAGCGTAGACCCTGCGAAGCTAGATGTCACGTGACATTGGTGCTCCGACCTCGTAGGTTTCTCTTTCCATTTTTGTTGTGACCGTAAAGGAGGGCCGTCTGCCCGGCGCCACCAGCAGGGGGTGGCTGAGCTGGGCATCCCGGGGCCACCCCATCGGGGGTTTAGGCGCTGCAAGCTCTGGAGACAGGCTTCCCTCCCGGCCCTCGGCTTTGCTGTGCTGCACAGGCTGTGTGTTGTCTGCATGGTTTGGGGTCCTTGTCTTTGTGCCTTCTCCCCCCTCCACCCCCCATCACCCTGTACAGGAGTTCCCACGTTTCCATTGCCCCCTTTTCTACGTCCTCTCGGTTACCCTGGCCCTGTTCCTGCCCGAGCCCTGCAAAGTGTACAAAGCAGCCCTTCTGTGTCCACGCACCTCCGCCCCACGAGGCTGACCCCCCTGCATGCCGTCCCCAGGCCCTCCACTTGCTCAGCCACTCAGACTCGCTAATCTGGGACATGTTTCATTCCGGTCCCTAGCTTGGGGGTCCTGGGCCCACTCAGCGCCTCACCCAGCCTGCCGCTCTTTAGGAACCCTGCACACTATAAAAGGCTCTCTGTGTGCAAAGCAGCTTCTCCCACAAACTGCTCCCCGAGTGGGTGTCAGTACCTGTAGCTGGCAGAGCGTACCTTTCTCACTTGGAGCATTGGCCTGGCAGTGATTGTCATGGGTCTGCAGCCACTCTGTGGGCCCCTGGGAGGATGCACCCGGGGCCCCCAGAAGAAGCTCCAGCTGCGTGGCTCCCAGGGCTTGACGCCGGGCCTGGGTTCAGGGCCATCGCCATCTGCTGTCTGAACAGCTTCAGACCCCAAGCGGGCAGAAGGAAGAGGCTTCAGGCTGCGTCCCCCCAACACCTGCCATTAACAACCGCCGAGCTCTTCCGCCCAAGGTGCTCAGACCCGGGTGCCGTTAAATCCCCCGTGATGTCAGGACCTCGCATCACTGAGGCGCCCAGCTCCTTCCACTTTCTCCGCTGGGTCTCCAGAGCTGAGAGGGATGAGCTGCATGCAAAGGCTCATCCAGGAGGTCGTCAGGTGCCTCTGACGCATCGTGGGATTTCACCCGAGTCTTCTGCCCCTGGAGCCTCCATCCAGAAGCAGGCTTAGCTCTGGGGCTGGGGCGAGACCTCCACATCCAGGCCCCAGCTTGGGGAGAGGGGGTTGAGGCTCCAAGGCTGAGTCCTAGGGTCCCGAGCCCTCTGCCTCCCGCCTGCTCCCGGGCCAAAAAGGAGCAGGCTTGCAGAGGCAGGCTCCCTGGGGAACTCTCGTGTACAGACCAAGATGTAAATAAACACTTTGCTTTTCTTGCCTGACTTGATGGTGTCTCTGTGCTGGGGGAGGGAGGGTGAAAGAGGGGAGGCCTGGTCTCGGAACTTCTGGGGCCAACCTCTCATAGGAAGAGCGGGCCTCACCAGGTAACAGTCTCCAGGGCAGGGCCTCACCCTGCAGACCCTCCTGTGAGCCTGCTGTCCCTGGGAGAGGAGATGAGGGTCCCATCATCATCCCTGGTGATGTTTGAAAACTGTCCTCTGGGCAGCCATGTTCGCTTTCTCAGCTGGGGCCTCCCAGGGTTTCAACTTGCTCTGGTCACTAGCTGGGTCCTGGTGCCAGCTCCCGCCTGTGTCCCCTCCTGTTCCTCCCCTGGGTCCCAGGCCCACATCCTCCACTTGAGCCTGGCTGAGTCCTGCCAAGCCTTGGAGGTGAACGGCCAGAGTCCCGCCCTCTCCTTGTCTGCTCCTGGTTGTTATGCGATTCCGAGTGTTGACGGGGTTCACAGGCGCCCAGCCTCTGGAGGTAAGTTGTTGGCCCAGGCCCCCACACAGACCCTGGTGCCATGGGTCTGCCCGGGTGGGTGGACGGTGCCCCATTCAGTGCATTCACACAGCCTCCTGGGCTCACGGCAAAGTCATCTTCCAGCACTGGAAGTCGTGTGTTCTAGACCTTTCCTCCCCTCCATCCTGCTAACCTGCCTTTCCCTTCCTAACTAGGGTTGCCAGACTACAAGTCAAAATACAGAACACCCAGTTAAATCTGAATTTGAGATAATTTTTCAGTATAAGTATGTCCCAAGCAATACTGTTATTCATCGTTTATCTGAAATTCAAATATAACTGGGCCTCCTGTTCTATCTGGCAACTCGATTCCCAACTCCTTTGAGGAGCCCTCTCCTGCCAGCCAGGTGTCTCCAATTCCCGAGCACTGGACCCACACCCCAGTTGCAGAAACAGCTTCCTTCTTGGTGTGCCATTACTTTTTTTTGAGACTGGTTCTGCCCTCTACCCCAGCCATCCAGAAGCAACTGCCGGCCTTTACAGAATCTCTAACCCCCTTGCACCCTGGGGTGTGTGTTGAGACCTGAAGTCCTGAAAACGTGAACTCAGTGTTGTCAAGGAAGCAGAGGAAAGCACAGTGAGGTCTTGAGATCCAGGGTAGGGACAGGGGGTGTCACTGAGAACCCCAGTATTAAACTTTCAACGTGCTGATGTTTCACAAGAATTAGGCCATTAAGCACCAACTCTGTGTTCATGGAAAAATTCTTACACTTGAAATCAGACCTCCACTCTCTGACTTCCATGTGACTGAGCAAGTTATCTGAGTTTCAGTTGCCTCATCTATAAAACAAGGGAAGTTAACAGTTCCTACCCCAGGAGTCAAGTCACCGGATGGGATCCGGTACGTACTTGCAGAATCAGAATCTGGATTTGGGAGGCAAAACTCCTCTTCCCCCAAAGGCTCCTAATCAGAATGTCTCCTCTATAAAATTAGTTTTCCAGCGTGGCTGTAAAAATATACCACAAGCCAGTGGAGGGGTTTAAAACAACAGAAATTAATTTTCTCAGTTCCAGAGGCCAGAAGTCTGAGGTTAAGGTATCAGCAAGATTAGTTCCTTCTAGAGCCTCCACTGTGTACTCAGTCATGTCCAACTCTTTGTGACTCTATGGACTGTAGCCTGCCAGGCTCTTCTGTCCATGGGATTTCCCAGGCAAGAATACTGGAGTGAGTTGCCATGTTCACCAGGAGATCTTCACGACCCAGAGACTGACCCCACGTCTCTTGCACCTCCTTCACTGGCAGGCGGGTTCTTGACCAATGTGCCACCCCTGGAGGCTCCAGCTGAGGGTCTACTCCATGCCTCTCCTGGCTGATGGTTACCAGCAGTCCCTGGTGCTCCTCGGCTTGTGGCTACATCACTCCAATCTCCCTTTGTTGTCATGTGACCGTCTTCATCTATGTATCCAGGTTTTGCTGCTTTTTTTTTCTGGTTGCACCGAGTCTTAGTTGTGGCATGCAGGATCTTCAGTTGCAGCACATGGGATCTTGTTCCCTGATCAAGGTTTGAATCCCATCAACTCACCATCCCCTCAAATTTAGGGCCTCTTAGAGTCCTCTGGGCCCAGGATAAAGTCTCCTGAAGGGTCAAAAATACCTGGATACCAAAATCACTTAACCAACAGACTTACTCTGCCGGCTCCAGCTCTGTGACAAGTTTTGTGCCAGGCCCTGGGGATTTGGTACCAAAAAGCAAAGACTCTTCCTCTTGGAAGGAGAGACGTAGGTGACTTGCGTGATGAGAGGTACCAAGGAAGATGTCAAGGCAGGGATGGGAGCTGGGGGCAGGAGGATTGAGGCCAGTGGGCATCAGGGACAATTTCCCTGAGGACAGGGCATTTCAGCAGAGCCCTGGAGGATGGTAGGATCTGGGAATCACACGTGGAGGAGGCTTGTGGAAAGCTTGGCCCTTTCAGGGCACTGTGGCTGGGCGGTGAGTAGAGAGGTGGGGCTGGGGGAATGGGACAGCTGAGGCCATTCCGAGTGTGGTGGGTCAAGGGTGGGTCTCATCATCCATTAAGCGAGTGTTTTATCAGCCACCAGCACCTGACAGACAGGGGGTAGGGCAAGGAAGACAGATCCGTCCCCCACGCTCACGGCAGAGCAGCTTCTAGAAAGGGAGGTTATCAAACCTGGGTGCATATTTGAATCACCTGGAGGAACTTGAAGCCCCATGGATATAGGGACCCAGCCCAGTGATTTGATTTGAATCTACCAGGTGAAGGGTGGGGTTGGACACGGGTTTTTCCAAATTCCCCCAGGAGATTCCAGCGTGTTGAGGGCTGAGAGTCATTGCATCATCATTCTGGCAATCATCTGATGAATCAGGGGAAGCCTTAGGAGGAAAAGATGGAGATGGCCAGGTGAAGGAGGTTGGGAAGGACATGGA EMBV3_32986 CTCCACCCACTTTGTTAGGAGCTGTACCTCTAATTCCGAGTATGTAAAAACAACCCTTTC Gene GeneID:506096|HSPA4L:XM_002707745:119_cdna Constitutive 0 NULL GeneID:506096 17 GENE HSPA4L NULL heat shock 70kDa protein 4-like EMBV3_05431 GACCTCTTCCTCTCTTCCACTCCCCTACTCCAGTCCACTCCATCATCTTCTTACGTGTAA Gene BVV0102_291030 - 1 EMBV3_25255 GK000010.2:21448396-21457271 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019860 1 XLOC_010539 NonCoding TCONS_00019860 XLOC_010539 NonCoding NonCoding - 10:21454709-21455382 - TSS13750 673 1 TCONS_00019860_1 69 0.184249628528975 1 0 0 0 0 0 0 0 0 0 0 0.000293455346549259 1.36058406804506e-05 0 0 0 0 0 0 0.000111846682888214 0 0 0 0 0.000354421432412339 0 0 0 0 0.000114177306535207 0 0 0 noncoding 0 0 0 0 0.0312997712242345 0.806666876425312 0.0462923497928621 0.429660619437755 TTGCAGTTTGAATTTTTTTTTTTTAATTCTACAAAAACATATTAACACATTGCTGAGACTCTTCCAGTGCTTTGGAAGAGATCTGTGCAAGAGAGGACTCTTAACTTCCTCCAGCTTCCTTAGCTATTGGGTAATTGTGTATCTGGTCAGTCCTGCTAATGTTACTGAGCCATGCAAAGCGGGAGGGAGTTTTCACTAAAGATTGAGGATGACGTGGTAGGTCCACATTCTTCAGCACTAGTTCCTGGAACTGCTTCGATGATCACTGACTTGCTAACTTCCTTCTCTGATAATGTCAAGTCTGGACCTCTTCCTCTCTTCCACTCCCCTACTCCAGTCCACTCCATCATCTTCTTACGTGTAAGGGTGAAACCAACATAAAAGAGGGAGTCTTCAGCCTGCTTTCCAGAACCAGGGCACAGGAATTTCTTTCCTTGGATGATTCTTCTCTTAAATCTTGGGTCTTTGACTCTTCTGCATACCCCTGACTTGGAAGTGTGTATCCTTCTGAGGCAAATGTGACTGAGTAGTCTACATTTCATAATTCCCAGCCCATGATCTGTGATGCCCAGAAGGACTGACTTAACCCCCCAGGAGCAGCCACTAAATTTTCACAGTTCCTGCCTGGCTTTCTAGCCAAACAAACTGAGTTCTTCCCACTCAATATCCAGCC TCONS_00013061 . 5' 1861 TCONS_00013061 . 5' 1861 EMBV3_24598 GCAGTTCCTAGGCCAAATGTGTTGTCCATGTTGCAAGTTGTTCTTGCTGCCTGATGACCC Gene GeneID:508235|FBXO7:NM_001038059:19_cdna UTR3_Alt 2 NULL GeneID:508235 5 GENE FBXO7 MGC134509 F-box protein 7 EMBV3_02548 TTTTGTCAACTTTACAGACATCTGTAAACTTGGTTCTATAGATGGTAATAATCAACTTGT Variant GeneID:520094|EIF2S2:NM_001015621:1138_cdna 808^864 1 EMBV3_16418 GeneID:520094 13 GENE EIF2S2 MGC139724 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa EMBV3_20938 GCTGGTTAGAGAGCACAGGCCATGCAAAGGCTCAAGGACAAGGTCAAGTGATCATGAGAC Gene BVT0102_077972 - 1 EMBV3_21064 GK000023.2:52143600-52288935 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133746 TCONS_00133745 1 XLOC_081196 NonCoding TCONS_00133745 XLOC_081196 NonCoding NonCoding - 23:52144147-52145303 - TSS99825 1063 1 TCONS_00133745_3 67 0.417685794920038 2 0.0813852813852813 0.000243185881361188 2.32161505502782e-09 6.94877416118424e-09 5.8630295918401e-09 3.33396757170166e-09 2.50584428214945e-09 4.14035842475381e-09 0.000784547912450459 0 0 0 0 0 0 0 0 0 0 0 0.00018224312656782 1.14231877215841e-05 0 0 0 0.000208282057528525 0 4.31230427678846e-09 0 0 0 XR_226417.1 LOC101904603 PREDICTED: Bos taurus uncharacterized LOC101904603 (LOC101904603), 0.0 998 100.00 0.51928504233302 XR_242456.1 NKAIN3 PREDICTED: Homo sapiens Na+/K+ transporting ATPase interacting 3 (NKAIN3), transcript variant X3, misc_RNA. 4e-06 57.2 78.48 0.070555032925682 0 noncoding 0 0 0 0 0.062858536548161 0.582554825711207 -0.0322881008071992 0.52261965518735 GGCTCCCCTGGGATCACGGTCACCAAAACTCCCGCAGGCCTTTCCCCGGGGAGACTGGGGGCCTGTTACCAGCAGTCACCGCCCTGCCTTGACTGCCTGGGTGAATCAGGTGCTAATCAGAGCCTTGGTCTTGGCAGCTCCCCTGTCTGGGTTTTCTGAGTGCGCCCGATTTAGGCCGGGTGGGGGGATTCCTACGGCCCTGCCCCACCCACGAAGACCGAGAAGGCTCACCCGGTGGCGAAAGGTGGGCTCGGTGACTCATCTCTGGGATGACCTCACCTCCCGACCCCAGCAGAGCAGATGTCCGGATTTGAGACCTCATACCGTGACTTTGGACGGCTAGTGCGTTCCCTTCTTCAGATTATATACTGGCTCGAGTAGGTGCATGGGTGTGTTGGTTCAGGTGCTTCTGGAAAGCCCCTGCCCTTGCTCAGCACATGGTCATGTCCGCACCGTGTCTCTGCCCGGAGTGGAGTACTCTCTAACACAATTGTCAGTGCCCTGCGCCTAGTGGACGCTTGATACTTGCTAAGTGGACAGATGCATCTCTCTGGTACGGCTGAGCTCACCGGGATGACCTCATTTCATCCGCTCCTCCTTCCTCCCAGAGTCACAGCCACGCAGACTTTCTGTGTTTCCTTGAACCTGCCACCCTTGGTCTCATGATCACTTGACCTTGTCCTTGAGCCTTTGCATGGCCTGTGCTCTCTAACCAGCTGTCTCACTGTGTCACTGGCTCTTCTCTTCGAGGTCTCAGCTCAAATGCCGCCTCCTTAAAGAGGTTTTCCTAACCACCCAGTCCAAAGCAGATCCTCCAGTCACTCCCATATTACTCTGTGCAGTTTTCTTCATAGCACTTAACATGATTAGACACTCTCATGTTTATTTATTTTCCTATATCTCACTAGAACACCCTCCAGAGGAAAAGGGCCTGTCTTTTAAGGGTCGGTTTTATTCATATGGCCAGGAGCAGCGCCTGGAACAAAACAGGTGCTCGAAAATATTGTTGAATAAATTAACGAATTCCAGAGGGCTGAGAAAACAGTCGTGTGGTTCTAAGGAG TCONS_00135517 r 5' 501 TCONS_00135517 r 5' 501 EMBV3_21985 CAACTGACTAATTCTAGCAGCAACATGAAACCTTAGGAAAGGATAGGGCAGCTCTGTAGC Gene BVT0101_057493 + 0 NULL GK000014.2:36627378-36897621 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053246 TCONS_00053242 TCONS_00053253 TCONS_00053244 TCONS_00053251 TCONS_00053249 TCONS_00053243 TCONS_00053245 TCONS_00053248 TCONS_00053252 TCONS_00053241 TCONS_00053247 TCONS_00053250 1 XLOC_031686 Coding TCONS_00053243 XLOC_031686 Coding Coding EYA1 14:36896158-37090333 j TSS39331 4227 1 TCONS_00053243_4 588 18 0.978323565461905 0.00131139917187962 0.00183698585542782 0.00101916634130904 0.000762067821330832 0.000665675932946129 0.000412066106704216 0.000568226313440438 0.00106222208481542 2.57186751250625e-06 1.73344376243264e-08 5.22375174887194e-07 1.71921018608474e-08 2.25061316357638e-07 7.93326520115207e-08 0.000537939467330017 1.06227457203872e-12 3.44498570723731e-71 3.10735746660305e-19 1.08619626957939e-06 0.00119185726070884 0.000952065710608474 2.62244403522087e-07 1.3942234762985e-170 1.19882807401656e-23 0.001780116525855 0.00165857842714123 0.000387064591053298 2.03559411532909e-14 0.000107872112376393 9.96892370359022e-05 XM_002692699.2 EYA1 PREDICTED: Bos taurus eyes absent homolog 1 (Drosophila) (EYA1), 0.0 6812 99.92 0.894724390820913 NM_000503.4 EYA1 Homo sapiens eyes absent homolog 1 (Drosophila) (EYA1), transcript 0.0 4525 83.93 0.999526851194701 TCONS_00053243_4 sp|Q99502|EYA1_HUMAN EYA1_HUMAN Eyes absent homolog 1; 0.0 1169 97.30 0.998299319727891 0 coding 0 0 1 0 -0.0497919259108453 0.750564468659699 0.0196576422425934 0.712676305409425 GTTTCTTTGTCTGGGCTTCTCAGATGCTATCAGCTGCTGCCGTTTAGAGAACGAAAGAACGCGGGGCTCAAGGCGCTGGCTAAACAGACCGGTGGGAGCTGATGGCTCCGAGTTTGGGGCGAGGTAGAAACTCTCCAGTGCCACTTCCGACTCGGAGCCTTCCTGTTGCCGTCCGGTGTGGCGGTTTTCTCGCCGGGGCCAGCGTGTGCGCTCAGTCGCTCGGCAGCCCGAGCCTGCAGCAGCGCCCAGGCGGCGGTCCCCGCGGCCCGGCTTCCCCCAGCGGACGCGCTCCGCTTCCAACAGCGCCGGGCTCCGCCGGGAGCCCTTAAGACCCTCTCGCGTCCTCCTCCAGGAGCAAAAACTATGTCTGGAATGGAGGTTTGCTAAACCAGAAAATTCGAAGGAGCCCAGGAAACTGGTGGATGCAGCAGATGTAAAGCGCTGTGCAAACATCTCAAACCAGTTCAGATGTTGCTGTTTCCTCAAGTTGCAGGTCTATGGAAATGCAGGATCTAACCAGCCCGCATAGCCGTCTGAGTGGTAGTAGTGAATCCCCCAAACTCGATAACTCTCATATAAATAGTAATTCCATGACTCCCAATGGCACCGAAGTTAAAACAGAGCCAATGAGCAGCAGTGAAATAGTTTCAACAACAGCAGACGGGTCTTTAGACAATTTCTCAGGTTCAGCCATTGGGAGCAGCAGCTTCAGCCCAAGACCAACTCATCAGTTCTCCCCACCACAGATTTATCCTTCCAAACCATACCCACATATTCTTCCTACCCCTTCCTCACAAACTATGGCTGCATATGGGCAAACACAGTTTACTACAGGAATGCAACAAGCTACAGCCTACGCCACGTACCCACAGCCGGGACAGCCCTATGGAATCTCCTCCTATGGTGCATTGTGGGCAGGCATCAAGACTGAAGGTGGATTGTCACAATCTCAGTCACCTGGGCAGACAGGATTTCTCAGCTATGGCACAAGCTTTGGGACCCCTCAACCTGGACAGGCACCGTACAGCTACCAGATGCAAGGTAGCAGTTTTACAACATCATCAGGATTATATACAGGAAATAATTCACTCACAAATTCCTCTGGATTTAACAGCTCACAGCAGGACTATCCATCTTATCCCAGTTTCGGCCAGGGTCAGTATGCACAGTATTATAACAGCTCACCGTATCCAGCACATTACATGACGAGTAGCAACAGCAGCCCAACAACGCCGTCCACAAATGCCACTTACCAGCTTCAGGAGCCACCATCCGGCATTACCAGCCAAGCAGTTACAGATCCCGCAGCAGAGTACGGTACAATCCACAGCCCCTCAACGCCTATTAAAGATTCAGATTCTGATCGATTGCGTCGAGGTTCAGATGGGAAGTCACGTGGACGGGGCCGAAGAAACAATAACCCTTCTCCTCCTCCGGATTCTGATCTTGAGAGGGTGTTCATCTGGGACTTGGACGAGACAATCATTGTTTTCCATTCCTTGCTCACTGGGTCCTATGCCAACAGATATGGGAGGGATCCACCTACTTCAGTTTCCCTTGGACTGCGAATGGAAGAAATGATTTTCAACTTGGCCGACACACATCTATTTTTTAATGATTTAGAAGAATGTGACCAAGTTCATATAGACGATGTCTCTTCCGATGACAATGGACAAGACCTAAGCACATATAACTTTGGAACAGATGGCTTTCCTGCTGCAGCAACCAGTGCTAATTTATGCTTGGCAACCGGTGTGCGGGGCGGTGTAGACTGGATGAGAAAGTTGGCCTTCCGCTACAGACGAGTAAAAGAGATCTACAATACCTACAAAAATAATGTTGGAGGTCTGCTTGGTCCAGCCAAGAGGGAAGCCTGGTTGCAGCTAAGGGCTGAAATTGAAGCCCTGACAGACTCCTGGTTGACACTGGCTCTGAAAGCCCTCACGCTCATTCACTCCCGAACGAACTGTGTGAATATTTTAGTAACAACTACTCAGCTTATCCCAGCGTTGGCGAAAGTCTTGCTATATGGTTTAGGAATTGTATTTCCAATAGAAAATATTTACAGTGCAACTAAAATAGGAAAGGAAAGCTGTTTTGAGAGAATAATTCAGAGGTTTGGAAGAAAAGTGGTGTATGTTGTCATAGGAGATGGTGTGGAAGAGGAACAAGGGGCAAAAAAGCACGCCATGCCCTTCTGGAGGGTCTCCAGTCACTCGGACCTCATGGCCCTACATCATGCCTTGGAACTGGAGTACCTGTAACAGTCACCTAGCACTTTGAAGCTGCACAGCCGCCCTGTGACCGGGGGACACATCCACCAAGCTGAGTCCCAACTGGGCGCCAGACTCCAAATTAACATTTCAGCATTTTGACACCCAGCTGCTGTGGGTCCTCGCCTCCACCTCTGTGGGAAATGAAGGACACCACACCCCTTTCTTCAGAACGGCTGTTGACTCCTAGTACTGTGAATCCATTGCAAATAAGCCATGAGAATGTTCTAGCACAGTGTAGTGTGTCTTGGCCACATTAACTAACCATGGTTCGAACCTGTGAAGAAAGGACCTGCAGACGCTTTATGTTTCTAGCATCTTCAATGTGACATAAAACAGCTTCTCCAATACAGCAAACTTGATTGCACAACAAAGACTGAAATGGGTTTCCTGAGTACCAGTGGGGGGATTTTTCTTGTAAAGGTTTACTTTTTCTGGTGTCTCATACCCAGGGTCTTCTGTACATCTCTACTTATTTATGAACAGACTTTAAAAAAAAAAAAACAGCTTTATCGAGGTATAATTGAAGAACCATACAGTTCACGCAAACAGACTTTTGACATCAGATAACTGAAGAGACAGTAGCATGACAGAAGCGATCGAAGGCCCTGGCCTCATGACACAGCAAGTACTTTGAATTTTAGCACATTGCAAAGTAGTTTAAAATATGTCTAATTTAAACGTATAATATGTACATCACTGAGACAATCATGTACAGAAAGAATTTTTGGTGTAAATTTGTAATAATGGATGATTTCTTTTACATATTGTTTAGAAAAATGATATTGAAAGGTAGCAATGCCTTGATAGTGAAGTATGAGGAGGACCGGCACAGACACGCAGGGCCTTCTCCAAGTACTGGGTATAAATATGTAGATAATGGATTTTTTTTTTTTTTTTAGATCATGTTGTCAAGACCAAAAGCATGGATGTCAAGTGTCAATAGGATTTTGTTTTCTAATAATTTTTTTCCCCAATCTGTACTTTTTTTTTTTTTTTAATGCTGTTAGGAGGGCCTTGGTAAATAACACATCAGTGTCTTAAACAACTGGGGTCGGGGTGGGGAGACAAGTCCTCTTACAACCTCACTTTTTCATTTTTAGCATTAATGCAGTGTAACTATTTGGCAAAGGAGAGTTATTCAAATGCTTCTTCCCATAGAAAGAAGGTAGATGATGGATAGATTTTATAAATGGCTCATGAATTGGACACTAGCAAAGGGACACTATCATGTGTCCAGATGATATTTTCTTGTTTAAGGAAGGCCATGACCACATATCTGCAAATCAGCACAACTTTGTATTACTTCCTTACATTCATGTTCTTTCTCTTTCCCTCCACGTCCCACCATCACCGCCCACCAGAAAAGTTCATTGCCAGCAGTGGGACATGATCCAGTCATCATCACCAAGAAAATAATGCTACTCTTTTCACCCCATCCTAACTATATGACAAGCGTAAATCTGAGAAATGAAGCTTGTCACCTTTGTAATACCCTCAAAAAAGTTCAGCCAGAAGTAATCCATCAGTTTATCTAGACACTAGTTTCTCTCATCTAAAGGCCTTCCATTGTCATGAGATTACTTTTTGGATGAATTTTCTTTAATAGTATATTGGAGGGAAAAAAACCCACCAGCTTTGACCCAAAGTAGCTACAGAGCTGCCCTATCCTTTCCTAAGGTTTCATGTTGCTGCTAGAATTAGTCAGTTGTGAATATCTCCAAATTGTTGAATCATTGAATTCAGTTGTTTTTTCCTCTCTTGCTTGAAGCAAACAGAAGTCAACAGTTTTTTAGCCTTTCCATTTTATGTTTTTGTACTCTGCAAACTGAAAAGACAAAAGTTTATCATCTTGGCCTTACTGTATAAAGGTGTGTTGTGTCCACAACTGTGTACAGACTTTTTCTTCAATTTGTGTTTAAATTAATAAAACTGATTTGTGAAGTACTGTAAG EMBV3_41616 GTGATGGATCGGTCCGTGGAGCATGACAAAGCTTCAAAGGATGCTAAGTATGAACTGGTG Gene GeneID:515021|PSMD5:NM_001075693:5_cdna Constitutive 0 NULL GeneID:515021 8 GENE PSMD5 MGC142666 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 EMBV3_33190 TTTTGAACGATTTTGTACCTGTGTGCGCCCGTGTAGCCCATTTCACTGCTTCACACGCAC Gene BVV0102_107543 + 0 NULL GK000008.2:907900-943472 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224190 TCONS_00224193 TCONS_00224189 TCONS_00224188 TCONS_00224192 TCONS_00224191 TCONS_00224187 1 XLOC_137470 Coding TCONS_00224191 XLOC_137470 Coding Coding PALLD 8:897838-926930 j TSS168177 4253 1 TCONS_00224191_2 493 11 0.85418170568217 0.00236887595225046 1.70170540568184e-06 2.24629079946772e-05 0.00214303751262804 0.000349717486849067 8.2063149366341e-10 6.04505358024696e-07 0.000516759972228525 0.000910446683393842 2.33077296983234e-26 9.68609921469858e-05 2.48906582037432e-05 1.41465528292605e-07 0.000620011289681723 0.000322121214712559 0.0239030915286533 0.0125420482308645 0.0128260754297082 0.000623123910932581 0.00183729430364176 5.72346500431584e-07 0.00791978602121059 1.05165462426723e-05 0.009434717318171 7.67914784370816e-07 0.000495935045799864 6.97678019521259e-05 0.00049584412317303 0.000464074856136944 7.57883112917764e-05 XM_003582498.2 PALLD PREDICTED: Bos taurus palladin, cytoskeletal associated protein (PALLD), transcript variant X1, mRNA. 0.0 5813 100.00 0.757582882671056 NM_001166110.1 PALLD Homo sapiens palladin, cytoskeletal associated protein (PALLD), 0.0 1279 78.31 0.364448624500353 TCONS_00224191_2 sp|Q8WX93|PALLD_HUMAN PALLD_HUMAN Palladin; 0.0 909 88.44 0.997971602434077 6 coding 1 1 1 1 -0.531746378961458 0.120054406619547 -0.242426824856034 0.0159043039650636 GCCACCACCGTCTCCACCGGGGTCTCCGCCCTCGGCCTGCCGCGCGCCGCCCCCGCTGCGGGGCTTCCCAAGAAGGCCAGCAGACCTGCCAGGATGGCCTCTGACGAGGAGATCCAGGGCTCCAAGGACGCGGTCATCCAGGACCTGGAACGCAAGCTGCGCTTCAAGGAGGACCTGCTGAACAACGGGCAGCCGAGGTTGACCTACGAGGAAAGGATGGCTCGGCGGCTGCTGGGTGCCGACAGTGCGACTGTCTTCAACGTCCAGGAGCCAGAAGAGGAGGCGGCCAACCAGGAGTACAAGGTCTCCAGCTGCGAGCAGAGGCTCATCAGTGAAATCGAGTACCGGCTGGAGCGGTCCCCGGTGGAGGAGTCAGGGGATGAGGCACCCTGCGGGGACACGTCTGTGGAGAGCGGAATGGCCCCCTTCTTTGAGGTGAAGCTGAAGCATTACAAGATCTTTGAGGGTATGCCTGCGACGTTCACATGCAGAGTGGCTGGCGACCCAAAGCCCAAGATTTACTGGTTTAAGGATGGAAAGCAGATCTCCCCCAAGAACGATCACTACAGCATCCGCAGCGACCCCAGCGGGACCTGCTCCCTGCACACTGCAGCCTCCACGCTGGAGGACGACGGCAATTACACAGTCATGGCCGCGAACCCTCAGGGCCGCGTCAGCTGCACAGGGCGGCTGATGGTCCAGGCCGTGAACCAGAGAGGCCGCAGCCCCCGCCCGCCGGCCGGACACCCTCACGGCAGAAGGCCGCGCTCACGGTCCAGGGACAGTGCTGACGAAGGGGAGCCCATCCAGGAGCGCTTCTTCCGCCCGCACTTCCTGCAGGCGCCCGGGGATCTGACAGTGCAGGAAGGCAGGCTCTGCAGGATGGACTGCAAGGTCAGTGGGCTGCCCACGCCCGATCTCACCTGGCTGCTGGACGGCAAGCCAGTGCGCCAGGACAGCGCCCACAAGATGCTGGTGCGGGAGAACGGCGTGCACTCGCTCGTTATCGAGCCCGTCTCAGCCCGGGACGCCGGCATCTACACGTGCGTGGCCACCAACCGGGCGGGGCAGAACTCCTTCTGCCTGGAGCTCGTGGTCGCAGCTAAGGAAGCGCACAAGCCACCGGTCTTTCTGGAGAAGCTGCAGAACACGGGCGTGGCGGACGGCTACCCCGTGAGGTTGGAGTGCCGGGTGTCGGGGGCACCCCCACCACAGATATTCTGGAAGAAGGAGAACGAGTCACTGACTCACAGCACGGACCGCGTGAGCATGCACCAGGACCACCACGGCTACGTGTGCCTGCTCATCCAGGGTGCCACGAAGGACGACGCGGGCTGGTACACGGTGTCAGCTAAGAACGAGGCCGGGATTGTGTCCTGCACGGCCCGACTCGACGTGTACACCCAGTGGCAGCAGCCTCCGCCGAGCGCCAAGCCGAAGCGGGTGCGGCCGTCGGCCAGCCGCTATGCCGCGCTTTCCGACCAGGGCCTGGACATCCGGGCGGCGTTCCAGCCCGAGGCCGGCCCATCCGCGCTGGCGCTGAGCCCCGGCCTGGTGGAGAGCGAGGACCTGTGATCAGCGCCCTCGCGGGAGCACAGACCCAAACCGTGCCACCCGGACCCGCCTCCTGCCGCGGGACGCAAGTGCACCTCGACTCCGAGAGACAAAAGGGCACCTCAACTCTCCTTTTCTTCCTGTAAAACAAAACAGAGGCTGTGCACACGACGCCAGTAGACGAACGCCTTGCACAGAATTCACACTCATCAGCCAATTCAAACTCCGGGAGTCGCTGTGTTTCAAGGGGTCTGAAAAGCCAAAGCCCTCATGGAAAAGTGCCCCCTCTCCGTGTTGTCCTAAGTGCCTTCAACACTGGCTCAGCACTGCCACCCAGCGTGAGCGGAGGCGCTTCCCGGAGGCGGCCCCACAGCAGGAGGGCACGACCAAGAAACCCACGCAAGTGCCTTGTCTGTGCAAACCGTTTTCTACTAAGTCGTACGAAGGAACCACTTGCTGCAGTTCTAGCAACATCCTGAGTTTCTGTCAAGGTTAAGACCTTCATTGTTAGCTTTTTTTTAATGTGTATTTTCCTTTTGTGTTGCCTTGGTAGGGAGCTTACATGCTGAAATGCGTAACGTACTCTGAGGAAAGCAGAAACAGATCACAGACCATTCCACAGAGGGCGTCTCGACCACCCAAGTGACCGCGGCAGGCGGGGCGTGTCGGGGGTGAGGGGCTAGGGAGGAGCAGAGGGGAGAAGGGCGAAATGCAGGGTGCACGGTGACGGTGTCCACGCAGAAGGCAGGGGGGGCGGGAGCCAGTGGAGGCCAGGCTTCCCTTGGTTCTCTTCAAATTCCGCCTACAACACTGCCGTTCCTAAGTCAGGGAGTTGGGGTTCCAGCGGTGGGGGACCCTCGGGACACCGCAGGGTCAGAGCCGGAGGTGGGATGCACAGAGCAAGTTGGTAATGGGCTGAGCGGAGAGGTCGTCAAGGTCGGAGGCAGCCTGTGGGCACTCGTCTGCTGGGGGGCACAGGGCTGAGCTAGAGCCAGGTGGGCGCCAGCGTGCATGTTCCCCACCGCGCCCGCGCGGCGGGTGGGAGCGTAATTTCACTTCCCTGCAGCCATGGGGCCTCTGACTGAAGAAGGTGCTGGGCTCCCAGTCATCCCAAGGCCATCCTGAGTGCCCCTGACCCTGGTCAGCTGGACGGGGCGGATTCTGACCAGACTTGACAGTTTTAAGTCGGAACCAATCAACTTTAAACACGAGAAAATGGGGCCTGCTATGATATGATAATGGTACTTTGCTATGAAGAGAACACACTGTATTCCTTATGCAAAACACATTTATCTTTCATTATTTATGACAAAGATGTCAAACTCTCTTAGCTCAGTTACTCGATATGTAGTATTTTTGAACGATTTTGTACCTGTGTGCGCCCGTGTAGCCCATTTCACTGCTTCACACGCACAGCTCTCCACTTCTTCTAGACACACCAAGCAAGCTCTGCGTGCCCAGTGTGAGCGCCGGTACCCGCAGCCTGGGCAGACGAGCACGCGAGGCTCTCCTGGACCTCTCTCTCTTGCAGAATTACGACTGATGTCTTCTCATACTTGCCAAATTTTCCCGAATGTGACATTTTGCTGATTTGCTGGGTTTGGGATTAAGCAGCATTATTTTGCCACCTTTCATGTATTTATAAAACAATAAGTACTATCCTACTACTTTGGGTTGTTGTGCTGGTGTAATGTGGATTTAACAACAATAAATATTTAACAAATCAGAGCTGCAGTTTTGTGAAGCGCATGCTCAGTTTCCAGTCTCTCTCACAGCCTTGATGAACCCGTGCAGACCAGACCCACTGATAACTGCACTGCACGCTCTCCTGGGTGCAGGAGACCGGAACGGGCTCCAACTCCACGCGGCCACTGGACAGGGCTCACAGGGCCTGTCAGCGAGGGGCGCTCAGCTCCCACGGGCCACCCGCACCCCTTGGCATGGCAGCCCGTCCGTCCCCAAGCCCAGCACCAAGACCCTCGGCACACGTCTTCACACACACTAACTCTTGTTGGGAGAACCCGTGCTTCAAGGGACCACCAGCTGTGGGGACTGCAAAGTCCCATCCACACAGAGCCTGGGTGTGGTGTCGGGGAGAGGCAAGGTGGGTGCACCCACGAGGGGCCTTGGGAGCCCTCTCGAAACCACGCCCACCTCAGCACTTTACCTGATACGTGCGTGACACTGGTTTCTGTGACCCCACAGGGAGCACCTTCGCACCATTTAACCATCACCTTTCTCAGGAACTAAGTGCACGGCGCTGTGGCTCAAGATGTCAATACAAGATGCTGAACACACTCCTTCCCACAGGCACACCAGATCTACTGCTACACACACAGAAGTTTCCTCTAAAGTGACCTCAGGTGAATGGGGAAACCCACGTCAGCCCCACAGTGAACCCCACCGCCTGGCACAGTGACCCACATCAAGGGGACTGACCCCGAGCTGCTCCCTGGGGAGTGAAGGGTGTGGACGCCTCGTCAGGACCCCAGCTATTCAACTGTGAGTCCAGCACCAGACTCACTCAGCTTTGAAAGCAAATGAGCATTTCTGTCACCAGAGTTACGAGTATAAACACAGAAATCCTTACAAGGCTGCACACTCGTCCAGGCCACAGGAAACTGAAGAGCCAGCCAGCGGAGAAGGGCACAGACTGAAAGATGGTCGGGAATGAAACTGCTGTTTGTAGAGACTTAGGT EMBV3_27498 CTGCTCAAGGAGGATGCCAGCCTGGCTGTGAGGAAATACTTCCACAGACTCACTCTCTAT Gene GeneID:540442|LOC540442:XM_002689528:169_cdna Constitutive 0 NULL GeneID:540442 8 GENE LOC540442 NULL similar to interferon alpha H EMBV3_16422 CGCCCAGAAGAAGTTAAAACTTGTGCGCACGTCTCCTACGGGGAGATGATTGGCTGTGAC Variant GeneID:532483|ING4:NM_001035389:55_cdna 514^622 1 EMBV3_24101 GeneID:532483 5 GENE ING4 MGC127324 inhibitor of growth family, member 4 EMBV3_42593 GAAGCCAGGAATTGGGTGTCGAAGAGGTTATTGTTTCAGAAAGATGTGGACGTCAACCTG Gene GeneID:100336628|LOC100336628:XM_002683965:2_cdna Constitutive 0 NULL GeneID:100336628 Un GENE LOC100336628 NULL alpha 1,2-mannosidase-like EMBV3_07095 GGAAAAGCAGAACAGGGGGAGTTGGTGTTTCCTCCTTGTTTGGGCTCTTGCTTACACCGT Gene BVT0102_207247 + 0 NULL GK000024.2:22767027-23121226 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141857 1 XLOC_086284 NonCoding TCONS_00141857 XLOC_086284 NonCoding NonCoding - 24:23004620-23005123 - TSS106068 503 2 TCONS_00141857_1 55 0.988071570576541 1 0 0.00524751464061592 0.0019777231142487 0.00332997338803187 0.00161790213626975 0.00053003512576239 0.000696921155590452 0.000892726869578316 0.000470355404045247 0.000501956980429099 0.00130060659369612 9.10211545141037e-06 0 1.71130302185985e-05 7.48150411283746e-05 0.000477939810421746 0 0 0 0.00235229990649958 0.00341699990027688 0.000199162714496166 0 0 0 0.00106062204485602 0.00215705213353443 0.00200352503740887 0 9.65131198491986e-06 0 0 noncoding TTGTAAAGGCTTTGCCTGGCAGGCTCATGGGGGCTCCTGCCCTGCCCACACCACCCTTTAGTCAGCAGGCAGTCACTGGACCCTGAGCAGAGTTGTGTCGAGAACTCATGTTCCCCTGTCTCTCATACTTTTTGAAGGATATTTCCTTTTCTAGCCCAGGTGCCTTCATTTCTAGGTCTCTTTTCTCTGAGGCCTTGGGCAGAGGTCTTCCTCAGGTGCCTGTACTTATAGGGGAGGAGGGAAAACCCTTGGAGACACTCCCCGCCCTGCTCTGACCCAGTACCAGTACTTTTCCACTCACAGCCTCACCCTGAGCCCTCTTTCCTGACCTCGGGGGTCCATAAAATGGCTGGAACCTTTTGTTCAGGGCTCCCTCACCAGTGAGATGGACCCAAGTGTCTGTGCTTGTCCACCTGACTCTGGTGAGCCTTTCCACAGGAAAAGCAGAACAGGGGGAGTTGGTGTTTCCTCCTTGCTTGGGCTCTTGCTTACACCGTCTCTCG TCONS_00138646 . 5' 33213 TCONS_00138646 . 5' 33213 EMBV3_05561 ATCAAGGGAAGCTGGGCGTCGACCTGCCAGCTCTGCGCCCCCACACCCTGGGATCTGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00495 GAAGAGGTGATGGGGCTGTGCATTGGGGAGGTTGACACCGTCAGAATTGTTCACATTCAT Variant GeneID:519513|BRCC3:NM_001075790:5_cdna 138^209 1 EMBV3_19418 GeneID:519513 X GENE BRCC3 CXorf53 BRCA1/BRCA2-containing complex, subunit 3 EMBV3_35351 CTGTGAGAATCACCGAAATGTGACAGAGACGCAGTGAGCAAATGCTGTTGAAAATGGCAC Gene BVT0102_253134 + 1 EMBV3_25917 GK000030.2:60170264-60196557 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06536 CTAAAAATACGCTCCACTGAGGGGCGAAAGAAAGTCTTCTCCACTTGCAGCTCTCACCTG Gene GeneID:788535|LOC788535:XM_002687510:419_cdna Constitutive 0 NULL GeneID:788535 5 GENE LOC788535 NULL cOR9K3 olfactory receptor family 9 subfamily K-like EMBV3_28593 AAGGAAGACGACATGCAAAGTGTTCATGATGCTCTCCAAACAGAAATAGAATTTTTGGAG Gene GeneID:522573|LOC522573:NM_001075833:51_cdna Constitutive 0 NULL GeneID:522573 26 GENE LOC522573 NULL hypothetical LOC522573 EMBV3_37506 TTGCCTATGGCACCTTCCTGCTGTTCGCCATCTTCTGGAACATCTTTGCCTACGACCTGT Gene GeneID:100336895|LOC100336895:XM_002697968:697_cdna Constitutive 0 NULL GeneID:100336895 25 GENE LOC100336895 NULL rhomboid protease 1-like EMBV3_16618 ACCCGTTCAGTTCAAAACATAATGTTATTGGAGGGTACTGGTCCTCGTGTTATTTCTGCT Variant GeneID:281729|SMC3:NM_174295:9_cdna 92^198 1 EMBV3_39819 GeneID:281729 26 GENE SMC3 CSPG6 structural maintenance of chromosomes 3 EMBV3_30904 CTCATCTGACTCCAAAGCCCATGGTAGTGATCTGTCTCCCATTGCCTAGTCTCAATGATA Gene BVV0101_082028 - 1 EMBV3_03520 GK000006.2:63416349-63982703 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20155 GGTTTCAACATAAACCAGGCCAGTCTCCACGGCTATTGATCTATCAGATTTCCAACCGTT Gene GeneID:100299426|LOC100299426:XM_002691401:346_cdna Constitutive 0 NULL GeneID:100299426 11 GENE LOC100299426 NULL similar to pre-B lymphocyte 3 EMBV3_21395 CCATGGGCCAGAGTGGCTAGAGAAAGAATCACAGAGAAGCTGGGACTTGCAGTTTCAGAA Gene BVT0102_166010 + 0 NULL GK000004.2:105110530-105153962 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15637 GTAAGAATGGGCAAGTGAAGAAGAGCCGATGGGGAAATGAGAAACAGGACCAGAGCAACG Gene BVT0102_008522 + 0 NULL GK000003.2:115924615-115992206 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12701 CACGGGTACAACCTCAAGTCTTGGACTGCTGGCCTCGTGGGGTTTTCCACGTTTTCTTTT Gene GeneID:493708|CDC2L1:XM_002694126:477_cdna Constitutive 0 NULL GeneID:493708 16 GENE CDC2L1 CDC2L2 CDK11 cell division cycle 2-like 1 (PITSLRE proteins) EMBV3_22303 CCTCAAGGCCGGGGGCAAGATCCTCACCTTCGAGAGGTGTACAGGCATTTCGGCAAGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01719 TCCCGTAGTTCTTAGATCAGTGGGTGGACTCCGATCAGCTCCTCTATCAGCACTTCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15241 TAACCTCCAGAAGGGAGTCCAGTTTACCATCAGGCACCAGTCGCTAGGCCATTCTGTCTA Gene GeneID:614890|PTPMT1:NM_001076353:102_cdna Constitutive 1 NULL GeneID:614890 15 GENE PTPMT1 MGC134593 protein tyrosine phosphatase, mitochondrial 1 EMBV3_37809 ACACACAAGAAGAAATAGAGGCTTTCCCAAGAGTTTGGTCTCCACCTGAGGATTATCGGC Gene GeneID:617901|MRPL13:NM_001034805:97_cdna Constitutive 1 NULL GeneID:617901 14 GENE MRPL13 MGC127837 mitochondrial ribosomal protein L13 EMBV3_36283 GGTGCTATTATGAGGACCAATGCTCAAAGTGGATTTTGTTCTTGAACAGCGTCCCAGTAG Gene BVV0102_261652 + 0 NULL GK000009.2:39856801-39903106 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237122 TCONS_00237124 TCONS_00237123 1 XLOC_144652 Coding TCONS_00237122 XLOC_144652 Coding Coding AMD1 9:39899292-39924437 j TSS177352 5498 1 TCONS_00237122_1 218 0.0878501273190251 7 0.781617881005409 0.00143964026153172 0.00232179661244621 0.000955090013914956 0.00205625332519536 0.00107157714312601 0.000422830351909498 0.000627955777175775 0.000701300243113051 0.00138412832969076 0.00161343082640903 0.000545743686547109 0.000710902339180599 0.000331371342796432 0.000462667125830755 0.000534205837285507 0.00933651671924167 0.00445979183517837 0.010521636362877 0.00120482776757408 0.00128448056351487 0.000351717700725608 0.00311768955549053 0.00300240066798449 0.00742017836973719 0.0006440556437736 0.000698141533541186 0.000839968923325087 0.00122003414558708 0.000793537447829365 0.00157713958830402 XM_005210772.1 AMD1 PREDICTED: Bos taurus adenosylmethionine decarboxylase 1 (AMD1), 0.0 8015 100.00 0.808112040742088 XM_005266926.1 AMD1 PREDICTED: Homo sapiens adenosylmethionine decarboxylase 1 (AMD1), 0.0 2949 81.63 0.553292106220444 TCONS_00237122_1 sp|P50243|DCAM_BOVIN DCAM_BOVIN S-adenosylmethionine decarboxylase proenzyme; 3e-100 298 87.88 0.752293577981651 1 coding 0 0 0 0 0.0667753800480172 0.628544399059963 0.00795056836054046 0.862995555731015 TCTCGCTCCCACAGTATGGCCGGCGACATTAGCTAGCGCTCGCTCTACTCTCTCTAACGGGGAAACAGCGGACTACAAGAGACTGAGCTGTATCTGCCTCTATTTCCAACAGACTCACGTTCAACTTTCGCTCACCCACACAACAAAGCCGGGGAAATTTTATTAATCCTTTTTTTAAAAAAAGTTAATATAAAATTATAGCAAAAAAAAAAAGGAACCTGAACTTTAGTAACACAGCTGGAACAATCCGCAGCGGCGGCGGCGGCGGCGGGAGAAGAGATTTAATTTAGTTGATTTTCTGTGGTTGTTGGTTGTTCGCTAGTCTCACGGTGATGGAAGCTGCACATTTTTTCGAAGGGACCGAGAAACTGCTGGAGGTTTGGTTCTCCAGGCAGCAACCCGACGCAAACCAAGGATCTGGGGATCTTCGCACCATCCCAAGATCCGAGTGGGACATACTTTTGAAGGATGTGCAATGTTCAATCATAAGTGTGACAAAAACTGACAAGCAGGAAGCTTATGTACTCAGTGAGAGTAGCATGTTTGTCTCCAAGAGACGTTTCATGAAAGATGGTGTTACTGCAAAGGATGTCACTCGTGAGAGTGGAATTCGTGACCTGATACCAGGTTCTGTCATTGATGCCACAATGTTCAATCCTTGTGGGTATTCAATGAATGGGATGAAATCGGATGGAACTTATTGGACTATTCACATCACTCCAGAACCAGAATTTTCTTATGTTAGCTTTGAAACAAACTTAAGTCAGACCTCCTATGATGACCTGATCAGGAAAGTTGTGGAAGTCTTCAAGCCAGGAAAATTTGTGACCACCCTGTTTGTAAATCAGAGTTCTAAATGTCGCACAGTGCTTTCCTCACCCCAGAAGATTGAAGGTTTTAAACGTCTTGATTGCCAGAGCGCTTTGTTCAATGATTACAATTTTGTTTTTACCAGTTTTGCTAAGAAGCAGCAACAACAGCAGAGTTGATTAAGAAACATGAAGAAAAAACGCAAAAAGAGAACACACATAGAAGAAGGTGGTGGCTGCTTTTTAGATATTGATACCAAGGGCCATGCTTTCCATAACCACCACCTCGTAGTTGCAGAAAGCCCTAGATGTAATGATAGTGTAATCATTTTGAATTGTATGCATTATTATATCAAGGAGTTAGATATCTTGCATGAATGCTCTCTTCTGTGTTTAGGTATCCTATGCCACTCTTGCTGTGAAATTGAAGTGCATGTAGAAAAAACCTTTTACTATACGAAACTTTACAACACTTGTGAAAACAATTCAATTTGGTTTACGCACAGTGTAATATTTCTCCAGGTGTCATCCAAAATTCCCCACAGACAAGGCTTTCGTCCTCATTAGGTGTTGGCCTCAGCCTAGCCATCTGGGACTGTTCTATTAATTGCTGCCAGGATTTTACATCCAGTTACCTCCAGTTTCTAGAACATATTCTCTACTAACGTTATTGAAACCAATTTCTACTTCATACAGATGTTTTTGCAACAGCAATTAAAGTTTTTCTTCCACGAGTGGAGTCCTCTAAGAAAACTATCCCTTCTGTGTATTTATATTTTAACACTGCTTCCTGTACTTGTATTACTTGGATTCCTACTGTTACCATGGTGTCTCCCCTCCCAACCACACCCCCTCAATAAAGCAATACACTGTTACACTGTGGGTTTTATACGAATCTATACCCCAGAGGGGGAAGGCGGGGGTAGACCCTAGGCTTAATTTTCTTTTAAGGTCAATGGAATTTGACATTTTTCATTGCCATGCACTCTTTTGGAATAAACTATTGTTGATTAGCAAAGACGGCGTAGATTGGTACTAGGGAATATTGGTAGAACTGTATGGAAACTGTGCCATTTGGTGTCCCCCATTAAATGAAATGAGCTTCTCATAAGTACCATGTCGTTATTAACTTGCTCAGTAGTACAAAAGCATTTTTATCACAATTTATTAACGAGATTTAAGATAAAGGTATCGGTTTCAACAAATCAAGTCAGGTCAGATGATTCACCTTAACTTTTACTTTCGTAGCCATTTCCACTAATTTCTGTTAATGATATGCCATGAACTTTGGTTCAAAGCAGAGTCAATGTCTTTTCCATCTTGTGACTTAAAAGTTCCATGACTTTATGCTACATGTAATAGTGTTCTGACTTTCCTCTTGCTTGTTTGTATTCCTTTCACCATGGAATAGGATCAGGTGATGAATGAGAACTGTTAAGGTTATTCAGACATATTCAGTGCAGCAGAATGCTATCCACAAAACGTTACACACAAAATTACAAAATCATTGCTGGGAAATGACCTAAAAATACAGGCATAAAAGAGTTGGCATCTTTTAGCTGTATTTGCTAACATGGACATTTAAGCAGTTGATAAAAGAGCAAAGTTGACTCAATTTTGTATTTCTTCTTGTCCTCAAACAATTTTTGATTCTTTCTGGAGTGATGCAGTGATGCTTTTGTTCCTTCCGTATTTATAATGGAAACACTTCTTTTTTAGTGTTTCTGAACATAAAATCTGCTTGATTTGAAATCAAGTGGTTGGAACACTTGACTTTTATTTTAAATGCATTGTTGATTCAAAGCTTCATTGAAGAAGCTTTCAATCAATGAATCATTCTGATTTTCTATAATTACGCACAGTACCTAATGTTTTGGTGCTATTATGAGGACCAATGCTCAAAGTGGATTTTGTTCTTGAACAGCGTCCCAGTAGATTTGATGACATTTATTGGCTTGAGGTCTGATTTTCCTTCCCCTAATAGATTTAAAAGATTTCTATTTCATGTTGAAGACCTGCACAAATTTTGTATGGAACAAAGCCTAGAAAAAAATGAAAAATAGATTGACTAGTAATCTAAATTAATCCTAATATGTATGATAGAGGAGGGAAAATTTTGGTGCCATAATTTCTCTCTTCATGGTGTTGGACATAAATCACTTGGAATGTATTTCTGTACCCACAATTTAAGATTCAATAAAGGTTTGCTTAATTCATTGTCTAGTGACATTCAGAAAGTTTTCTGTCAATGTATTTTTTTAAATAGTATACATGACCAAATAGTAGACTCTATATAAAGTTTTTATAATTAATTGAAGGAATCAATATTTAATGTTTTTTTTTAAGGTTATGGGAGATGTTATAAAGATCTTTAAGTTCTGGGAGAACAGTTTTAAACGTTTGTTGTTGATAGTAGCTTCATAACTGAAGCTGAAAGGAAATCATCTGGGCTGTATCCCAGGTCATCAGAGTAGGAAAAGTGTAAGTAGAATAAGAATGCTAGAGTTTGGAACTAGAAAAGTTTGGAGATGGAATATTCCAGCATTTATTATGGAATAGGTACTTCCTGGTGGGTGGGGAGCAGAGTTTAATTCAGTTCTTGCAACTAGAACATAGTTAAAAGCTTTTGATCTTTGTGCCATGCAGATACGTATCTCATCATTTGGCGAAATTTCAGTTCTTCAGTCTCATATACAATAAGCTAAAAACTGGAATCTTTATTATATTCAGATCTTTCTTAAAATAAGCTTATCAGAATATTGTCCAAAATCTGAGTTAAAAAGGGTTGATCTTAGGGACCTCCCTGGCGGTCCATTGGTTAAGACTCTGTGCTCCCAGTGCAGAGGGCACAGGTTAGCTCTCTAGTCAGTGAACCAAGATTCCTGAGTGCCACAGAGCCCAGCTCTAAAAAGAAAAGGTTGATCTTAGAAAAGCAAGATGCTAAAGGTGTGTGCAGTCCTACAGTGCCAGATTTTTTTATAGGGACAGGTGGCTTGTTCGGCAAACACCTGGTGTTAACTGATGAGATTCAGGGACATAATCTGAATGTGGTAAATGTGACACACTATGAAAGAGAAAAGACTTGTATCGTCTTAGCCAGATAACACCACTTCCCAGCTACCCACCTTCAAACTTGACGTTTTCATCTGCCTTTCTCTTATTGTTACAGTGGAAGAAGTGTTAGTCCTTTGAATTCCTACCCACCCATTTCTACCTTTAGAGACTACAGGAGGCCACTGCAGGCATGTCCACTGTTGATCCCCATCAGTTTGTTTTACTTCCCTAGTTTCTCCCCACGTCCATTTGCTCCTTAGGATTTACTTTGTTAGTCCTTTACAATGCAAGAAATGTCAGTTCTTATTCCCAAACTGAACCATCTTCAAACTACTTGTAATCCAGCATTTTCCTGAGTGCCCAAACCAGAAACCTAGGATGAAATTGAGGCAGAGTCAGAGAGGTTTGTGATGTAACTCAGATTGGAAGAAAACTTTTGGCAGTGTCAAGAGATGTCCCATATGCTGTTGAAGTAGGACATGGCAGCCTACTCCAATATTTTTCGCCTGGAGGGTCCCATGGACAGAGGAGCCGGGCGGGCTACAGTCCATGGGGTCACAAAGAGTCAGACACAACTGAGCAACTGACAACACACGTGAGTTAGAAGCCCCCCAAATAGGTTGATATTTATAATTAAACATCTAAATTGGATGTATACTCAAATTTCTCCTTGAACCATCACACTCTAGCTTCAGAGTCCTCAGTTCTGCTCTGGTACACTGAACTATCTGCTACACACACCTCATTAGGTCAGATTTACAAAAAGTTGATATATACAAATCTTTTACAAGTTTTAAGAATGTACACTCTTGGCCCACAGCCACATCAGGACCAAAGAAAGTTCCCTTATACCACTACCTAAGCAATGAAGCGTTACTCTAGGTAGTTTAACTACCATCCAGATTTTTTTCACTAAAGAGTAGGGTTTCCTTCCCCATCCCAGCTCTGAAACTAAATTGAATCACTTAATGCTTTCATAAGTACAACGTTTTGAGAGGTTGAACCCATGTATTTCTTATTGCCGAGTAGTATTCCACTGTATGAATGTACTACAATTTGTTTAGCTATTCTGTTAAATGAACATTTTGTTGGTTCTCCATTGTGAGAAAATATTAATAAAGCTGCTATGAACATTTCCTCATACAAGCATTGTGGCTTCTGAGTGTGTAGTAGTATCTTGTGTTAATCTACATTTCTCTAATGAGTATGCGCTCTCATGTGTTCAGTTAGCCATTACTGTATTCTTAGAATGAAAGTTTTGTATATTTAAAAATTGGCTCTTTTCATTAATGAGATATGGAACTATATATTTTGGATACAGTTTTTTGGTGTATTTTGTAAATATTTTCTCCTAGTCTGTCTTCATTTTTCTAATAGTGTCTGGAGTAGTTCTTTTTAAAGTCCTGATGGGCACTATGATGGATTAGGATTGAGTTGAATCCATCTGTCATCTTTTTCTCAGCAATGTTGGGTATAATGTTTTATGTGATTTTGATTGTCATAACTTTAAGATTTTTTGGTAAAAATCTATCAATGGAATTGGTTTTTTTTCCAATTGATAACTCACAGATAACAATTAAAATTTTTTTCTCTTGTATCATGAGAACTTGCTAATAAATAAGCTCACTTAAAATT EMBV3_37263 CTACATTGGCGTCACCTACAAAAATGAGGAAGACAAGCTGAAGGACTGGGAGGGTGGCCT Gene GeneID:282301|PDGFRA:XM_002688255:168_cdna UTR3_Alt 2 NULL GeneID:282301 6 GENE PDGFRA NULL platelet-derived growth factor receptor, alpha polypeptide EMBV3_36170 GATTCAGCTTTCAACAGCCTTACATCCAAAGAAGGTCATACCACCCTGACATTTAAACAC Gene GeneID:616319|LOC616319:NM_001101254:115_cdna UTR3_Alt 1 NULL GeneID:616319 3 GENE LOC616319 NULL similar to SLC25A3 protein EMBV3_13153 GCTATGACAGTGGGGAGCCAAGAGGACACAGCCAGCTGTAACATACAGACCAACTTAGTA Gene BVV0102_399729 - 1 EMBV3_08911 GK000001.2:65620537-65680765 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000845 1 XLOC_000212 NonCoding TCONS_00000845 XLOC_000212 NonCoding NonCoding - 1:65648834-65650335 - TSS411 1222 2 TCONS_00000845_1 69 0.387888707037643 3 0.187333333333333 0.000879582855084452 0.00183371580459218 0.000973108731495411 0.000332981450168142 0.0010464230128028 0.000187341787572408 0.000176573726114188 0.000488860192739734 0.000187244967980515 0 0.000108652127808122 0 0.000117401273965917 5.77413313565379e-05 7.62827751162675e-05 0 0 0 0.000534005975155059 0.00180080111605904 1.98738231182284e-05 0 0 4.11570307165027e-05 0.00174062315155483 0.000882125333928677 0.000887023084873109 7.86021177328743e-06 1.58907167788748e-05 0 XM_005196078.1 LOC101906506 PREDICTED: Bos taurus uncharacterized LOC101906506 (LOC101906506), 0.0 1880 100.00 0.851882160392799 0 noncoding 0 0 0 0 0.232385172373009 0.263794466177879 0.0127800188319447 0.790808160208035 GCTCTGCTGTCAGCGCGGGACGTCGGGTGCCTCAGGGAACACCCGGGCCGGGCTCTGGCGGGGCCGCGCCTCCCGCCCCTCTCCTGGCACCGCCCCGCGCGCTGCGCCGGACCCCGCGCTCGGCCGCTCCCGGCTGTGCGGCCCCGCGCCCCGCGCCTCCTTCGCCTGAACAGGGCTGCCCCGGGGGGTCTCGGCGGCGGAGAGGCAAGAAAGACGCCCATGCTCCAGTTCCCAAGAGCAGGAATTATGTCTGAGATTTTACCCTGGACTTTCCCCGGATCTCTCATTCTCTACAGCCAGACCCTTTCCTGTGGAACATACAGAAAGTGTATCCCCAAGCCCTCAGCTGCCAGGCACAAAAGGTTTAACATCTTCTACCAAGGCCTGCCCTATTTACCTCAAAAAGAACTAAGAATGCTGCTTTCCTGAAAAAACAAACACACAAACCTCCGCGGCCGCCCCCGACCCCCTCCGTAAGCCCCCTCTGCAAGTGGAATACAGTCTGAACTACTTTCACAGTTGGAAACCAGCTTACCATTCTAACCTTCTATCTGCTCAACACCTGTGTTCCAGTTATACTGTGTTGGGCCAATTGCCATTCTTTGAATATATCCTGGATGTTTAATGCCCCTGTGTGATTTGCTCACTCTGTTCATTTATTCTGGATTTCTCTTCATCCCCATCTTTACCTGTTGAATTGTTCCCAAACCTTCAAGAGCCTACTGAGATGCCTTCTTCTTTAACAATGTTCTTCCAGAAATTCCCAGTCAAATCTGAGAGATCAATTAACTTCTCTTTCCCAACATTCTGTGCTTCTATTACAACACTTACTAAGTTGGTCTGTATGTTACAGCTGGCTGTGTCCTCTTGGCTCCCCACTGTCATAGCCTGCAAGGCATAATATGTTTCTGACTCAACTTAAATCCCATGGCAATTGGCAACATGCGTTTTAAAATGAATAACCATCCTTTGGATGTATATAAACTTTGCTTATTGTAAAAATTCAAATAAATAAAAGTATAAGGAAGGAAATAAACCAACACACTGAAATAACCACTGTTAATGTTTTGATGATCATATTTTCATGTATATATTTATGCATATGTCCATCCATCATTTATCCACAAATGGAATTATCTCATGTATGTTATGTTTAGGATACACCCTTTTTTATTATTCTCTTTTCTTACCTGACTCTTCCCTCACTGTTCCCCCTCTCAAC TCONS_00003570 r 5' 108 TCONS_00003570 r 5' 108 EMBV3_04417 AAACTGGGGATACAGCCCATTCCCATGATGGACAGAGACAAGAAGGACGAGGTCCCGCAA Gene GeneID:506061|PDE10A:XM_002690390:11_cdna Constitutive 0 NULL GeneID:506061 9 GENE PDE10A NULL phosphodiesterase 10A EMBV3_16682 TGAAAGCAGTCCTGAGTAATCAAAGCCCTTCTGCCGGGTTGTCCAACATCAGCTTGTTGC Gene BVV0102_350133 + 0 NULL GK000022.2:1119948-1261031 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129461 1 XLOC_078174 NonCoding TCONS_00129461 XLOC_078174 NonCoding NonCoding - 22:1123671-1123951 - TSS96328 280 1 TCONS_00129461_1 34 0.996428571428571 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1.02474206104422e-05 0 0 0.00141490836985032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005272442.1 CPEB1 PREDICTED: Homo sapiens cytoplasmic polyadenylation element binding protein 1 (CPEB1), transcript variant X2, mRNA. 1e-06 57.2 66.96 0.792857142857143 0 noncoding 0 0 0 0 -0.0599510543611268 0.722970707972966 0.0513737645247282 0.323487446371106 TGGAGGGTTCCAAGTTATGGATCCTAGAGAAATTCAAAAGCTAATAGATGGTACATGAGAGGAATTGACAGACAATGACTTGATGGAGAAGAGCATTTCCCAGCCAGGGCCAGGCGATGAGGGAGACAGGGAAGAAGCAGCACCAGGCAACAAGCTGATGTTGGACAACCCGGCAGAAGGGCTTTGATTACTCAGGACTGCTTTCAACTTCTTTTATGACCTGGATTGTCCACGATATAGGCACTGAAACTAAAGCAAACAGTGAAAGAATGATTCGTAC TCONS_00127750 . 5' 15898 TCONS_00127750 . 5' 15898 EMBV3_02166 CTGCATTCAGATGACCACAGGGGCCTACATAGCTGGAAACATTCATCCCATGATTCACGT Gene GeneID:785848|LOC785848:XM_002684700:25_cdna Constitutive 0 NULL GeneID:785848 1 GENE LOC785848 NULL similar to olfactory receptor Olfr177 EMBV3_39065 CACAAAGGGTGTGTTGGGCACTGGTGGCAATCCCCTACCTCTATAGCACATTAGTTTCTC Gene GeneID:514057|LOC514057:XM_002693654:245_cdna Constitutive 0 NULL GeneID:514057 15 GENE LOC514057 NULL similar to olfactory receptor MOR188-3 EMBV3_34488 GAGTGGGGTGCCATTGCCTTCTAGTGACCTGTTAGAGTCAGAAGGACAACCGCTATGAAA Gene BVV0101_038448 + 0 NULL GK000004.2:23127588-23499625 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33775 CAGGGTTAATTTCCTTCAGAATTGACTAGTTTGATCTCTGAGAAGCTTATAGAGGGTAAA Gene GeneID:281118|DSPP:NM_174038:7_cdna Constitutive 1 NULL GeneID:281118 6 GENE DSPP DMP1 dentin sialophosphoprotein EMBV3_21960 CCTTCATACCAACAGCAAGGCCTTTACCGCCAAGACCTGATGAGGGACTCTCTGCTTCTC Variant GeneID:534567|SNX11:NM_001076904:141_cdna 256^806 2 EMBV3_25241 GeneID:534567 19 GENE SNX11 MGC143176 sorting nexin 11 EMBV3_15475 TATTGTGTTGCCATAATGACACCCGGCTTCGCCTGAAGTTAGCTATTCTCGAGTCTAGAG Gene BVT0102_299672 + 0 NULL GK000011.2:24884635-24909397 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048544 TCONS_00196835 TCONS_00091433 TCONS_00135546 TCONS_00166151 5 XLOC_028676 XLOC_118500 XLOC_056208 XLOC_081769 XLOC_100989 Coding TCONS_00196835 XLOC_118500 NonCoding NonCoding - 5:539874-541084 - TSS146403 1210 2 TCONS_00196835_3 92 0.995867768595041 1 0 1.23688090494655e-05 5.0749736509837e-06 0 6.86293311335713e-06 4.08030676814175e-06 4.41958307636823e-05 4.14655522633625e-06 6.11025093370319e-07 0 0.000131819742259286 2.28221648657493e-05 3.28193470984871e-05 3.13492525687902e-06 2.44147569133687e-05 1.40949469580176e-05 0.000913988053926168 0.000620764777925378 0.00183030301876678 0 0 0 0.00102086030141722 0.00216680134197561 0.00105997221852757 6.36223720854383e-07 8.00621694802085e-06 4.84227902606253e-07 0.000204477631305186 0.000132961950916008 0.000130003012668427 XR_229156.1 LOC101907943 PREDICTED: Bos taurus uncharacterized LOC101907943 (LOC101907943), 2e-79 300 80.47 0.278512396694215 NR_037177.1 LOC100294145 Homo sapiens uncharacterized LOC100294145 (LOC100294145), 1e-14 86.0 89.55 0.0537190082644628 0 noncoding 1 1 1 1 1.55657144251834 0.000204121725010461 0.0183185106789647 0.741748851399055 TGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATAGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATATTGTGTTGCCATAATGACACCCGGCTTCGCCTGAAGTTAGCTATTCTCGAGTCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTACTATGCCTTTACCCCAAACTCTGTCTCCAAGTCGGTTCTGCCTCTTGGCCCAGAACCTACTTGACAAACCAGTATGGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGCCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGATTATCCCAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAATTTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGGGACTATATAACATCCAGCTAAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTAAATTCTTCTCCTCCGGGGGCCAAGAATCCTGGTGTATTCGCGTGATTCAACAACAGCCTTTCATTTGAACAAATGCACAATGTCATATATCCACCATTACAGTATCATTCAGAGTATTTTGCTGCCCTAAAAATCCTCTGTGCTCTCTTTGTTCTACATTCCCAGCCCCTGGCAACACCGTTCTCTTACTGTCTCCATAATCTGCCCTCCCCGACACGTCTTCTAGTTGGGGTCACACCAGACATAACATTTCAGACTGGCTTCCTGATCTTTGTTTTCTGTTTGAACCTGTCTTTTCACCCCACATCACTCAGAGAATGTTATTTCAATGCAAAAGACTTTGTCACATAAAAGCCTTGTTGATCACCCAACATGACCATGCTTAGAAGTACATAAGATTTTTTTTTTTTACTATGATCATAAAGTTCTAAGGGTTACATTTATTTCTGAATTATCATTACATTTATGAGTAATTCACCCTCATTAAATTAATATATATATGATTACACATT TCONS_00190695 . 3' 24771 TCONS_00190695 . 3' 25980 EMBV3_12592 TCTGTGACCGAGGATTTATCTTGGAGAACATTTCAGTATGCACGTGAGAAGAATGTGTGC Gene BVV0102_067635 + 0 NULL GK000017.2:7227079-7547409 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03804 TTGCTAGCCAGAGCTGCCCCAAGACGGGCTTACTTATAATGCTCCACCCCACAAAAATGG Gene GeneID:100125414|LOC100125414:NM_001105033:188_cdna Constitutive 0 NULL GeneID:100125414 25 GENE LOC100125414 MGC152428 hypothetical protein LOC100125414 EMBV3_24199 TCAAGGGCCCCCTCCCCATACCTGAGCTCGATGGCGGTGGGACCCCCCGACTGCCCTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07591 ACGTGGTACTGGGCTCCATCGAGAACAAGATGGAAGGCAAGGGCAACTCGCTTCCAAGCT Gene GeneID:613636|NAA10:NM_001046511:70_cdna Constitutive 0 NULL GeneID:613636 X GENE NAA10 ARD1A MGC137401 N(alpha)-acetyltransferase 10, NatA catalytic subunit EMBV3_36089 CTTTAATCTCGTCAAACAGAGGGAAGAATAGGCTAGCATTCCAGAGTCAGGGCACACCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12779 CTTCTCTGCCAACTGGATCTTTGCACTGGCTGGAGGAATGTTCTTGTATATTTCGCTGGC Gene GeneID:515437|SLC39A14:NM_001098036:85_cdna UTR3_Alt 2 NULL GeneID:515437 8 GENE SLC39A14 MGC155096 solute carrier family 39 (zinc transporter), member 14 EMBV3_35888 TTCAGCAGATAAGAGGCAGGAAACCTCCAATTTTTAGGTAGCACCCCTAGAGCTGTGCAC Gene BVV0102_176511 + 0 NULL GK000014.2:43978276-44029073 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051828 TCONS_00051827 TCONS_00051829 1 XLOC_031301 Coding TCONS_00051828 XLOC_031301 Coding Coding PKIA 14:43929498-43980582 j TSS38570 3974 4 TCONS_00051828_2 76 0.048565676899849 3 0.922263766810876 0.000101683983449384 0.000176702169559945 1.24620498231279e-09 2.30450513510728e-05 3.4029809429153e-11 3.25824702158862e-05 3.10750906996011e-08 0.000212685671047678 0.000139128517139352 3.93343583715941e-05 1.07766170350385e-05 5.85250114969432e-12 8.99124396418913e-12 1.36594004847619e-12 0.000690814096982959 1.24658805075896e-07 0.000979294662305259 1.02687415406413e-05 4.77775690762242e-05 2.62774216037267e-11 6.66553017583457e-08 0.000551940147227329 0.000686222112148636 0.00222086381804803 1.58879449054996e-05 0.000139142289415797 7.718937501126e-09 3.13030160967275e-05 1.9312931683507e-05 9.33220322951025e-05 NM_001037620.1 PKIA Bos taurus protein kinase (cAMP-dependent, catalytic) inhibitor alpha (PKIA), mRNA. 0.0 2928 99.94 0.408907901358832 NM_006823.3 PKIA Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor alpha (PKIA), transcript variant 1, mRNA. 0.0 3314 80.21 0.922496225465526 TCONS_00051828_2 sp|Q3SX13|IPKA_BOVIN IPKA_BOVIN cAMP-dependent protein kinase inhibitor alpha; 2e-48 151 100.00 0.986842105263158 1 noncoding 0 0 0 0 -2.11074337963284 0.0128246419243654 -0.0166968286713722 0.780987751290243 CTTCTAAGAAAATGGTCCTTAAGAGGAATTAGGAAGAACTTACTGCCCCTGCTATGTGGATATTTGTTAGCAATGACTGATGTGGAAACTACATATGCAGATTTTATTGCTTCAGGAAGAACGGGTAGAAGAAATGCAATACATGATATCCTGGTTTCCTCTGCAAGTGGCAACAGCAATGAATTAGCCTTGAAATTAGCAGGTCTTGATATCAACAAGACAGAAGGGGAAGAAGATGCACAGCGAAATTCAACAGAACAAAGTGGGGAAGCCCAGGGAGAAGCAGCAAAATCTGAAAGTTAACACTCCACTTTGACCTTCTTCAACACCTGACGATGTCTCCAATCTCCAGGCCTGGCTGGAATGCATTTATGTCCAAGAGTGAAAAGGGGAAGAAGAAAATGGCTGTACTGCTTTGCAGGAACCTGCTTGTTCTGTTAAAAGTGGGGGCAGAGGCTGTGGCTGCAGACAGACTTTTCTCTACCTCTGGCATTAGCAATGGTTGAAATCATGTGGCTTGTGTTTGGATGTCATTTTTGTATGGATCCTTTCACCTGACCATATGATGAAATGCTTGTAGAGAGTAGCAGTGATCTAGATGATGATTCTTCCTGTAGCATCTGGCCCCTCACAATGTCAGAGGATTTAATTGTGTCTAATAGCAAAGGGTTGGTTGAACCCCAGAGTTTAAATATCTCTGGCCTGAGTATTCACCCAGTAAAAGAACCATCCAGAAAGTACTGTTTTTAGCATTATGTATCTGTGTGTTCCTGCTTTGTTATTTACACTGTTTTGTATTGTACAATATAGATGCTCAGCACTGCCCCCCTTCTCCGATTGCTTATGAAAAACAAAAATGATGCACATTACTGTGAATTTTTATACCACTCATTTTTTAAAGGGCTGCCTAAAAATTCTGCTCCATAGCGTGGTGGTGTACACAAGATAGGACACACTTTTTTTTAAAACAATCTGTCCCCTCAATTCACTGCTGATGAATTAAGTCTAACAGATTCATCAGGACTCCTTTGCTTATTATACAGCATTTGAAAATATCCATTAATGTGAATATTACCTGAATTCAGTCTGTTTGGTGTCTGCACAGACCAGAGTTCAGTCTGCAAATTTTGTCTTATTCCCAAATGGAGAACTTTTTCTGACTAATATTTTTATTTCAAATTGTGAGAATTTTTGAGAACTGGGGATATGGGAACGAGAATAGAAAATAATACTAAGCACTGGAAATATTTTCTTCTCTGGAATCAAATTTCTTACAGTGCTGTATGATACTACTAACATTTGGAGGACAGCTTATCTCCATGGAGCTGAAAAACATGGAGAAAATGACCTTGCAATCATGTGGACACCAATCACAAAAGTAAAGCCCTTGTGTTGTATTTTTCATGTCTTTTTTCAGCCCTATCAGATCCAAATGTTATTATGCACTTTTTAATGTTTGTAAACTTTTACTAATAATTAGTGTGAATTGCATTCTGATACAATAATAATCATCATTAGAAGCTGACAAAATCCTTATTAATACTGTTGATGGCCTCTGCTGTGTTTTGACATCGTGTTTCTTAAATGGAAAGTTTCTATGAGCTGTGTAATCCCTCTGGTCAGTATTATGCAATCATTTCTCAGTGGTAATAAATAAGGCACCAGTGATATGCCAATGGCTCATGAATTACTGGACACATAGCAGGCAAAAGGAAGACCTTTACAATAAAGACCCACTTAACTGTCCTCAAGGTCTTAGATACCATTCCATATGAAATAGTTTAAGCAGCTTTTCAATGGGTAATCTACCTGGATACACCAGGAACTCAGCCCTCCTTTGTAGTTACATGAAGGATGCAAGGTAAGTTTGCCCTCATCTCTCTCTACAGTACTTTCTGAATGAGTGGGATAGGGACATGGATATCACTTGGTCCTCAAGCATATAGTAAAAAAAAATTAACAGTGTAAGTCTTTGAGAAAATAGGAAAGATTAAATTTTAGAGTACTTCCTTCTGCTTAACCCAATAGGATCCAAAATATCCAGTTAATATTCAAGCACATCCACCTATTTTACACTCACAAGTGGAAAAAGAAGCTCCTGAAGCTATTGTAGACAATTTCTGGTAGTCCGTTTAACACATTCAACCCATACAATCACTTTTACAGTATCCTTATTTATTATACTCATAGATTTTTTGTGAATGTAGGTAAAGTTCTCTCCATCCTTAAAATTGTGGAATTCCAAAATTGATTTCATGTGATTTTGTAGAGTTTAGGACTAGTGCTGAGTATATGTGGAGGATTTCTATTCCTGTGTGATATATTATTATTAATGCATGTGGTATCATGCTTGTCTTTGAATATCTATAGTTGCTAAATTGTGAAGTCATATGGAGCTTTTGAATTATTTTTGACCTCTTACTGCTACTTTGTATGCTATATTCAAACCCAGAAAAAAACCCCTATATTCCCAAGCCATAAAATTACCAAAAGATTCACATCCTAAAACGTTGCTCAGCAAAAGTTCATATGATCTTCCAAGTTTTACCATAATATCTTTTACTTGAAAGTCAATAATATACATGGAATTGATACTTTAAGGAAAGAATAGGGAAAGAAGGAAAGAGTAGAAAACTAAGACATTGATCTGATAATACACATTGAATGCCTGTTAACCAACTGATTTTATGCTATTCACTTCACAGCACATATTCTCCCATTTAATCCTCAAACAATTCAGTTAAAGAGGTACTATTATTCCATTTCACAAATCAGGAAATTAAGATTGAATAAGGTATAAGTTTTACAAGCTTAAAAAGCTAATAAATGATGAAATAAAAATTGAATCTGTGTTTAACTCCTGAGAGTTTTCTACTACACATGCCATAAATCTGAAGCCAGTTACAGAGCATATTTATCTGGAAGGGAACTTTTAGGGGTGGACCAGATCCATCTTCATATTTTAGAAGAGGAAATAGTCCTGAAAAGGCATTTGTTTTTCTCAAGGTTACCTAGATGAGCAATAACATAGATGTGAATAGCAATTGTATTTTTAAAAAATAATAATAAATTTAATTAAAACATTTTTTGAGTTATTCTTCCCAAAAGACATTTTTTCTGAAATAAAGTCTGCTAACTTAGCATGGTGTAGATTTTTTATGTTCCATGCTACTCATTTTGTTTAACTAGAAATGTGAAAATTTCAGGTTTTCAACTGATGTGCAACAGGTGTAAACTTTTCAAATTTACCCTTTGTCAGTTTTAAGCATCCTGTGCTGACATATTGATATCATAAATTCATAGAAATGTTTTTCAGCAGATAAGAGGCAGGAAACCTCCAATTTTTAGGTAGCACCCCTAGAGCTGTGCACAGTAAATGCTCTACACCTGTGTCTTACTCAGACACAGTGGAAATGCACTGGTTTAGAACATAAATGATATTGTTCTCTCTGGAGAAGCAATAAGAGGTAAAGAAATGTAACTGCAGGCAGTGGTTTCTGACTGAAGTCACTAGTAATAGGGTGGAAATGTCTAATCATCAAGTGAAAACAGGAAAGGAACTATGTTTATGATGTCTTAATAGGCCCTAAACTGTTCTTTAATTATGAGTGGCAGTCTCTGAAGTCATTTGTGAGCTTGTATGACTTTTGTATTTAGCGATGTTGCATGCTCACATACTTGATATTAAAAATAATACATTTTTCTGAAATGTACGCAGTCTATTAAGAGTATTTATTGAACACACATTATGTACACGATGCTCCGGAAAGTGCTGCGGGTGACAGAGGAGAAGGCCAAAGCTCAGTCATCCTATGGCGGACGTACCCAGCATTCCAGCCCCACTTTTCCTGGCCTCTACGCCAATAACGTTCACCTGCATCCCATGCTGGTAGCCCACTTCCTGGACTTCATCACCTATCAGAGACATCCCACCTCTCCAAATACTGAACTCCAACAGCACTGCTGTCTTCTTA EMBV3_03243 CCCTGGCTTGCAGGTCTTCTGTCCTTGCCTCCAAGGGTTTTCGTGTCTAGTGTCAACTTA Gene GeneID:515437|SLC39A14:NM_001098036:85_cdna UTR3_Alt 2 NULL GeneID:515437 8 GENE SLC39A14 MGC155096 solute carrier family 39 (zinc transporter), member 14 EMBV3_41672 GCTAGATTATTCATGACGGTCCTGTGGGTTTAATCATAATTGCACGTGGTGGCCTTGCTC Gene BVV0101_081735 + 0 NULL GK000003.2:11069609-11082614 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175479 1 XLOC_105260 NonCoding TCONS_00175479 XLOC_105260 NonCoding NonCoding - 3:11075125-11075614 - TSS130238 489 1 TCONS_00175479_1 35 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000594125488777404 0 0 0 0 0 0 0.000506542198730418 3.42835440954285e-05 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.122944113727554 0.358016101948049 0.0748229421166182 0.138626738728758 ATAGATTGCATTATTATTACATTGAATATAAAAAATTAGAGGCTTTGAATTTTGGTGAGAGGCAATGGAAAGTTTAGAAGAAACTCTGCCTGCTGAAGTACTAGGCCAAGGTATATGTGAAACAGAATACTCCATTTATGATGCCATCTTTTGAAAGATTACTTTGTCCAGACTTGATTGTGACTCTCATCAAAATTGAGTTGTCATACTTTTCTTTCCAAACATTCCTCAGTTTTCTTTGCTAGATTATTCATGACGGTCCTGTGGGTTTAATCATAATTGCACGTGGTGGCCTTGCTTCAAGTTGATTTATTTGACACCAGCTCATATTTTGCTTGTCAACCCTTTTCAGGAGGAACTCATGCTTGAGAAGGTAAAACAACCAAGTTGTAATACAATAAATGATCCTTATGTCATGCCATAAATATATGTAATACAATAAATATAATGATGATCCTTATGTAATACAATAAATATAATGTGGACACT TCONS_00168431 . 3' 5518 TCONS_00168431 . 3' 6006 EMBV3_29365 GGTAAGTGAGCAACGAAACTAGACAGTTCAGATTCAGAGACTCTTTATGGGTCTAGGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25987 GGACACACACTGCACTCATCCCGAGAACCTTCCAGTCACAACACCGTCTGCACACAGCAA Gene BVV0101_022419 + 0 NULL GK000018.2:1026030-1339477 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12352 ATTATCTACTTTAAACTTGCCCTCACACCCCCTTGCGCTTAGGACGCACCATGGAAGGGC Gene GeneID:504408|RPS6KA5:XM_002691117:47_cdna UTR3_Alt 2 NULL GeneID:504408 10 GENE RPS6KA5 MSK1 ribosomal protein S6 kinase, 90kDa, polypeptide 5 EMBV3_09064 TTGCTGTACGACCTACCGATGAGTCCCTCAACACTGAACCCGAGAAGGTTATTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_36449 TTAAGAGCCAGACTTTTTATCCCGAGAATCCTCTGCAGTCACCACTTGGATGCCACGTCC Gene GeneID:280745|CD5:NM_173899:105_cdna Constitutive 0 NULL GeneID:280745 29 GENE CD5 MGC137790 CD5 molecule EMBV3_31708 GGATGACCACGGGGGTCGCCATTGCTCAACAGCACTATCCCCACGTGGGCTGATGTGGTA Gene BVT0102_046027 + 0 NULL GK000016.2:52212875-52222593 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08687 ACCGTTTGCTTGCGTGTCTCTATGCCCTCTGTGACTCTCTCGTTCTATCTGTGCCTCCAA Gene GeneID:784460|SPIB:XM_002695128:637_cdna Constitutive 0 NULL GeneID:784460 18 GENE SPIB NULL Spi-B transcription factor (Spi-1/PU.1 related) EMBV3_29009 CTCTGAACTGCTCCCTCAGTAGCGTCATAACTCTCTCCTGATCCTTTGCTTTCCACCATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29180 TGATATGCTGGCCAAGAAAAACAAGCTTCAGGGTAGAGGACCAGAGGGACCACCTCCCAA Gene GeneID:407211|GKN1:NM_001001148:26_cdna Constitutive 0 NULL GeneID:407211 11 GENE GKN1 FOV gastrokine 1 EMBV3_17051 CAGTTTGACGTCTGAAAACTGGTTTGGCCCACACACTTGGGACTAAGAAGGCGGCCGTTT Gene GeneID:511060|EXTL1:NM_001100337:129_cdna Constitutive 0 NULL GeneID:511060 2 GENE EXTL1 NULL exostoses (multiple)-like 1 EMBV3_24815 TCAAGATGTCCCTTTGTAAGACCTTGGTTGGAAGAGACTGGATACTATCAACTCTACACC Gene GeneID:507990|ASPN:NM_001034309:84_cdna UTR3_Alt 2 NULL GeneID:507990 8 GENE ASPN MGC128677 asporin EMBV3_08150 AAGCATGTCTTCAAGCTCCAGACCCAGGACGGCAGTGAGTTTTTGCTCCAGGCTAAAGAT Gene GeneID:537578|SPTBN4:XM_002694991:188_cdna Constitutive 0 NULL GeneID:537578 18 GENE SPTBN4 NULL spectrin, beta, non-erythrocytic 4 EMBV3_25242 CCTTAGCCATGAGCAGACCCTGATTTTCAGTGTTGAAAACCACCACTCTTTAGACTTCAG Gene GeneID:507481|CASP8:NM_001045970:79_cdna Constitutive 0 NULL GeneID:507481 2 GENE CASP8 NULL caspase 8, apoptosis-related cysteine peptidase EMBV3_02103 CCCAATGATCACTCAGGGTGGAATTTACATGTTTCAGCTTGTGGACACATACGCCGCCTC Gene GeneID:528050|SLC6A5:XM_002699103:113_cdna Constitutive 0 NULL GeneID:528050 29 GENE SLC6A5 NULL similar to Sodium- and chloride-dependent glycine transporter 2 (GlyT2) (GlyT-2) (Solute carrier family 6 member 5) EMBV3_34984 CAGGGCATCTACCACTTCCAAGCACAGGGTGGATCCTTCTGGTCAATAACATCCTTTGGC Gene GeneID:511917|FSCN3:NM_001075543:167_cdna Constitutive 0 NULL GeneID:511917 4 GENE FSCN3 MGC134271 fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus) EMBV3_23583 GTCCGCCCAAGGAAGGAATAGCTAAGTGATCTTAAAGTGGCACATGTTTGTTTCTCACTG Gene GeneID:516900|C14H8ORF70:NM_001083437:28_cdna Constitutive 0 NULL GeneID:516900 14 GENE C14H8ORF70 FAM164A MGC137953 chromosome 8 open reading frame 70 ortholog EMBV3_31693 TATTCAGGGTAAACCTACTTCGTGGAGAGATGTGAGGGGTTTGGCTTGATCGCTGAGCTG Gene GeneID:510745|ABCG1:XM_002685119:37_cdna Constitutive 0 NULL GeneID:510745 1 GENE ABCG1 NULL ATP-binding cassette, sub-family G (WHITE), member 1 EMBV3_43483 ACCTCGGGGTTTGAGTGACGTGGAAAGCTCAGCATTTAAGAACATCTTTTTGTCTAGGTT Gene GeneID:505757|PPP2R5C:NM_001083376:175_cdna Constitutive 1 NULL GeneID:505757 21 GENE PPP2R5C MGC143298 protein phosphatase 2, regulatory subunit B', gamma isoform EMBV3_37270 TACCTATGCCTCCAGGGAAGCCCAAGTAAATGGGTAGTGTACTTCAAAGTCAGTATACCC Gene GeneID:507234|TRAF5:NM_001105340:45_cdna UTR3_Alt 2 NULL GeneID:507234 16 GENE TRAF5 NULL TNF receptor-associated factor 5 EMBV3_31452 GCCGGGCGTACGCCGAAACTGTGGAGTTCTGAGGTGACCAAAGCCACATCATGTCCGTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12606 TGTGGTCACGGACAACATGTTCTGCGCTGGCTATAGCGACGGCAGCAAGGATGCCTGCAA Gene GeneID:617960|F7:NM_001034806:72_cdna Constitutive 0 NULL GeneID:617960 12 GENE F7 NULL coagulation factor VII EMBV3_22942 GCTGGAGCCCAGGGATATAGCTTTTGTGACCAGTTTCCTGCTGACTCAAAAACAGTCTTT Gene GeneID:100138449|LOC100138449:XM_002695446:93_cdna UTR3_Alt 1 NULL GeneID:100138449 18 GENE LOC100138449 NULL similar to zinc finger protein 211 EMBV3_05115 CTCTGCTCCTCACTGATTCCCAGCTCTGGTCCTCATTCTGACCTGATACTGTTCGTCTCT Gene BVV0102_102242 + 0 NULL GK000018.2:65584486-65611585 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085072 1 XLOC_051779 NonCoding TCONS_00085072 XLOC_051779 NonCoding NonCoding - 18:65594997-65600748 - TSS63620 3524 1 TCONS_00085072_4 112 0.0346197502837684 2 0.387478260869565 0.00102211043001359 0.000481203816306405 0.000346768830089014 1.4138739883661e-05 7.87363293432012e-05 3.75734079074883e-05 0.000498497001886427 9.49555881486089e-06 0.000102988981059545 8.05620433518136e-05 3.90557988812079e-05 8.11733496615671e-06 8.81098680436502e-05 2.5362016109791e-05 0.000229716955735893 0 0 0 0.000113488344333902 0.00180965316922307 0.00016730128474154 0 0 0 0.000209388265205293 0.000403854312226102 6.48403716211758e-05 2.72564226495307e-06 6.73055925513885e-05 3.41216839355752e-06 XR_228400.1 LOC101910129 PREDICTED: Bos taurus uncharacterized LOC101910129 (LOC101910129), 5e-106 390 80.68 0.111520998864926 0 noncoding CTCAGGACCTGCTGGGAGGCGCCTCCCTGGGAGGAAAACTTGAGGAAACTGTGGGGAGATGCTGCTGGCTGGGGGCTGCCGGCAGGAGAAGGGAGGAGGTGCAAATGCCCACAACCAGCACAAGAACGCTAGGGGAGAAAATTGACTTGGAGTTAGCCTTGTGTGCGGTGCGGAAGGAGCTGTGTTTTGGGCTTGTTTTTTTTTTTTTTGGCGGGGGGTGGGTTGTGGTGTTTCGCTTTCTGGGTTTCATCTTAGACTGATGGCGCTTTAATGGAGGTCTCTCCAGTTTGCTGTTAAAAGAATGGACCACATGTCTGTTGCTTCCTCGAGTGCCTTGATGCCTCTTTTTCGACCCATGAGTATATTCCTGGAATATCCTTTCAATTCCAATCATCTTCAAAAGGCCTGACTTTGCTACTCTGAGTCCCGGTTCCGGTACTCATACGTCCCGGCTCTGGTCCACACAGAGGCCTGGCTCCGGACCTCAACGCTGAGAGCTGGCTCTGCTCCTCACTGAAGTCCAGCTGCACCCCTGCCTGAGTCTCGGCTCAGCTCAGCACGCCAGGTCCTCTCCGCACTGAGACCCGGCAAGGCTCTGCCCCTCACTGGGCCTGGCTGTGGTCCTCGGTGAGGCCTGGCCCCACTGCGCAATCACGTGTGCCTCCCTTGCTCCCTGAGGTCCGGCTCCCTCCTCGGTGAGGACAGCTCTGCTCCACACGGGCCTGGTTACGGTCCTCACAGAGGCCAGGCTGTCTTCTCACTGCAGTTCAGCTGTGCTCCTCCTTGAGGCATGACTTTGCTCCTCTGAGGCCTGGCTCTGCTCTCCACTGAGAACCAGCTCCAGTCCACAATGAGGACCGGCTCTGGTCCCCACTGAGGCCTGTCTCCCGTCCTCACTGAGGTTCCACTCCGGTCCTGTGATGTGCTCTGGGGCCCGGGTAGGGTCCTCACTGAGGCCAGGCTCCGCTCCTCTGTGAGGCTCGGCTCCGCTCCCCAGTGAGACCCAGCTCCTCCTGCAGAGGCCTGGCTCCGCTCAGCACCGCCGCACAGCTCCGCCCTGCAATGGGCCTGGCTGTGGTTCTCGGTGAGGCCACAGTATCGTCCTCAATGAAGCACAGCTCCAGTCCACGCTCAGGTCCTTAGTGAGCCCCGGCTCTGGTCCTCACAGAGATTTGGCTTGCTTCTAACCGAGGTTTGGTTCACCTCCGTGAGGCCTGACTGCTACTCTGAGGCCAGGCTCCCCTCCTCACTTGGGGCCAGCGCCACTCCTCAGGTAGGCCTGGCTCTGCTCCGCACCGGGGCCTGGCTCCAGCACTGAGTCCTGCTCTGGGCCTCACTGAGATTCAGCTCCAGCACTGAGTCCTGCTCTGGGCCTCACTGTGGTTCAGCTACCCTCCTCACTGAAGCCCAACGTTCCTTCACTGAGAGTGAAGGTTCACCTCCACTCTTCACTCAGGCCCAGCCTGGTCCTCCTTGAGGACGGAATTTGGTTCTCTGAGGCAAGACTCCATTCTACACTGAGGCCCAGCTACACTCCACATAGAGACTGGACTCGGGTCCTCTCTGAGGTCTGGCTCTGCTCCTCAGTGAGACCCAGCTTCTCTCTGACTGAGGACTGGCTCCACCCACACTGGGGTCTGGCTAGGGTTCTCACTGAGCCCAGCTGGCTTCTCACTGAGGTTCTCTTCTCCCTCTTGCTGAGGATTGACTTGACTACTCTGAGTCCCGGCTCTGGACCTCACTGAGGCCAGGCTCCACTCCACACCGGGGCATGGCTACAACCTCAGTGAGTTCTGGCTCGCTTCTCACTGAGGTTCCATTCTCTTCCTGAGGCCTGACTTTGCTACTCTGAGTCCTGGCTGTAAGGCGAGCATGGAGAAAAGGAGAGTGAGCCGGACAGTCAGGCAGAGAAATATTTATTATAGGAAGAAAGAAAGTGGTTTTAGAGAGAAACCAGTGCTCTCTTGTTACAGCCAACCCTTTTTATACTGTATTGATGGGAAATTGTGCCCCAGAGGGGTTTATCCTTAGCCCACAGCTGGAGTCCTGTGGTCACATAGTCAAAGGGGTCTCATGGTCGGGTGGTCATGTAGTCTTGAGAAACTGGCACCAGCAGGGAAAAACAGGGTATCACCTTAAGGAAAAAACAGGAAGCTGTCAGGGCAACGTGGCCACCGCGATTTCACCCCTTGTTTGTCAGGTCACCACCATGGACCATATTTTAACTACAGCTATGAGCCCCTTGAGAGCCCTAACACTGGCTCTGGTCCTCAACAAGGCCCAGCTCCTCGCCTCACTGAGGCCTGGCTCACTTCTCACCACGGTTCACGTCTGATCCTCCCCGAGACCTGACTTTGCTTCTCTGAGGCCCAGCTCTGGTCCTCCTCGATGCCAGACTTTGCTTCTCTGAGGCAAGGCTCCATTCTGCACTGAGGCCTAGCTCCACTCCACACAGAGGATGGCTCCAGTGCTCAGTGAGACCGGCTCCTCTCTGCCCTGCACTGGGGCCCGGCTATGGTCCTCAGCGAAGCCCGGCTCCACGCCTCACTGAGGGTCGGCTCTTGTCCCCAGGGAGGCCAGGCTTCGGTCCGCACAGAACCTGGCTCACTTCTCACTGAGGTTCTGTTCTCCTCCTCCCTGAGGCCTGAATTTACTTCCCTGAGGCCTGGCTCCTCTAGGGACTGAGAACCGGCTCCGCTCTCCACCGAGGCTCCTATCCGCTCCTCACTGGGACCCACCTCCCTCAGCACTGAGGCCCGGGCCTCACAGAGGCCAGGCTCGCTTCTCACTACCTTTCACCTGCTTCTCCCTGAGGCCTGACTGCTTCACCGAGTCCCGTCTCCGCTACTCAGGAAGGTTCGGCTCTGGTCCTCCCTGAGGCCCAGGTCACACGTTACAGAGGCTCATCTCTGCTCCTCCCTGAGGCCCGACTTCGCCTGTCTTCAGCCCGGCTCCGCTCCACAATGAGGCCCGGCTCTGCTCCTCACCGAGGCCCAGTCTGGTCCTAAGGCTCGCCTCCGGCCTTCACTGAGTCCTCGCTCTGCTCCTCGCTTAGGCCCAACTTTGCTTCTCTGAGGCCTGGCTTGCTTCTCACTGAGGTTCAGCTCTGCCCCTCTGAGTCCAGACTTTGCTACTCTGAGGCCCTGCTCCGCCCCACTCCACACTGAGGCCTGGCTCACTTCTCACTGAGGTTCCGCTCTCCTCACTGAAGCCTGACTCTGCTTCTCTGAGGCAAGTCTCCGCTCCTCACAGATGCCCAGCTGTTCTTCCCTGAGGCCCTGCTCCACTCGTCGGTATGGCCCGGCTCTGCTCCTCACTGATTCCCAGCTCTGGTCCTCATTCTGACCTGATTCTGTTCGTCTCTCAGACCTGACTATAACAGGAGTCTCCATCAATATGGAACTTAAAACCACAACCTTCACATACTTTAAAATTGTTATATTAAAAATAAAGGTAATTTTTGGCAACAATGTATAGAAATTGGAACTTTTAAATGTTAGTCGTCAAAATGTGATATGGCTCAA TCONS_00085069 TCONS_00085070 s 3' 10513 TCONS_00085069 TCONS_00085070 s 3' 10513 EMBV3_22446 TGGTGATAACTGTGGTCCTGAGTACCTCGGGAGTTTTCTCTAGCTCTTGTCCCCCTAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24569 TGGGCTACATGAAGTTTGGGTCGAACACCCAGGCCAGCATCACCCTCAACTTGCCCAATT Gene GeneID:540844|SLC36A3:XM_002689314:3_cdna Constitutive 0 NULL GeneID:540844 7 GENE SLC36A3 NULL solute carrier family 36 (proton/amino acid symporter), member 3 EMBV3_42423 GCCCCATACGAATCAGGTGGTAAAAAGGACCCCTGTTACCATTGTTGATTTTTGTCTCCT Gene GeneID:504847|CCNI:NM_001083373:41_cdna Constitutive 2 NULL GeneID:504847 6 GENE CCNI MGC138097 cyclin I EMBV3_10349 TCCTCTTCTCTATTAGATTGGGTAAAGCAGGGGTCTTCATCCTCTGCGATCTAATGTCTG Gene BVT0102_369746 + 0 NULL GK000022.2:51326275-51335298 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129009 1 XLOC_077997 NonCoding TCONS_00129009 XLOC_077997 NonCoding NonCoding - 22:51333052-51335119 - TSS96057 1393 1 TCONS_00129009_1 53 0.139985642498205 3 0.327202323330106 9.83532389167709e-11 1.08050064675134e-10 0 0 0 0 0 0 0 2.95369386853035e-06 3.28669985995265e-06 0 0 0.000136763309440367 7.04404954530968e-06 0 0 1.80121128841415e-05 0 0 0 0 4.89172150007271e-13 0.000312909013859119 6.47896166395982e-11 0 0 2.64732672328436e-05 0.000118490136795462 0 XR_229469.1 LOC101907966 PREDICTED: Bos taurus uncharacterized LOC101907966 (LOC101907966), 1e-121 441 100.00 0.174443646805456 0 noncoding 0 0 0 0 0.109397849912318 0.479764633091628 0.0328176509798078 0.489065331456196 ACCCGCCCCGGACTCCTCCGCGCGTGCGCAGTGGAGCCGGGAGCGGGGCCGGAAGAGGAGGCGGGCGTCGAGAGAGAGCTGCAGTGTTCTCAGCCAGGCAGGCGTCGCGGAGCCGGCGCCGTCCGGCACACCTTTCTGAGTCCAGCCCGGCGATCTCGAGGAGTCACACCACAGGCTCCACGACCCTTCGGGTACCTCTTCTGGCCTGCGGGGTTATCCTGGTCTTAAATCAACACAGCGCCAGTTCTGCCAGTTTATTGCTACCAACCCATCACCCTCCACCCTCATGCACACATGCTCAGTCATGTAACCCCATGGACTGCAGCCCGTCAAGCTCCTCTGTCCATGGACTTTTCCAGACAGTCAGACATTAGATCGCAGAGGATGAAGACCCCTGCTTTACCCAATCTAATAGAGAAGAGGAGCTATTCCACAAATAAGCACCAAGTCAAGTAGTGTGTGATAAGCACCATTAAAGGGTATAAATCAAAGACTGAGACCCCAAGCTGTGAAACGGAGCCTTTCACTTGAGTACCTTTTGAGTGTGATCTTGAAAGCATAGAAATGATGGTGCATGTTAAAGGGGAGGAGACTAAAGGGGTTAAAGGAAATTTCTGGAACAAGCAGGGAAACTCATAGAGTGAAGATTAGGCCAGTTGAGCTGGACACAGACTACTGAAAGGGCCTGAGATCTCTGGCTAGAAGGGAGGCTGGTCCCATATATCCTACATACAGATATTGCAGGAGGTTTGAGAACAGAGAGAAATAGCTGAGGGTACTTTGCACAGAGGTACAGCCCACAGTAGGTCTGGTACAGCCCAGACCTACTAAGAACCCTTTGGAAAGACGTCTGTGAGGAAAGAGAAAAAACAGGTGCAGAAGAAAGAACTGGCCTGGTGAAGTTGAGGTAGGTCATTTGAACAGAATTACTACTTTTTTTAGGTTGAGTTTTGGCTAATTGAAATTAATATATTAAGCACTATCTGCTAACAGAGGCCCCTTGGCAGCTGGGTAGATAGTGGGGCAAGGTAATTTGGAATTAAAACTGCCTTGAGGGACTTCCTTTGTGGTCCCGTGGTTAAGACTTTGACTCCCAATGTAGGGGGACCGGGTTCAATCCCTAATCAGGGAACTACATGCCACATGCCACAACTCAGACCCATAGCAGCCAAATAAATAATAATTTTAAAAAAATGCCTTGAATAACTACATAGCAGTTAATCCCATGTGCATAAGAGTTACCATCAAATGATGATAATTCTACATCTCGATCTTGACACCCCCAAGTGCCTGTCTGTGGAAATTCTTTTAAATTGTTAAAGTTGTTATCAAACTAGAACCACTGCTTTTAGTCCTATTTATGGAAAATGAAAGCTGGGTTAATGGGCATGAC TCONS_00127202 r 5' 1101 TCONS_00127202 r 5' 68 EMBV3_24124 TCTGTGCTCGAGAAGGAAGGTGTAGACGTGCAAGAGAAGAAGGATGGTGTCGGCTGAGAT Gene BVV0102_315323 + 1 EMBV3_16655 GK000022.2:58754570-58782245 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127635 1 XLOC_077702 NonCoding TCONS_00127635 XLOC_077702 NonCoding NonCoding - 22:58763040-58769390 - TSS95430 562 1 TCONS_00127635_1 84 2 0.911797133406836 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000518945853622169 0 4.69957333008287e-05 0 0.000803624463414434 0 0 0 0 0 0 0 0 0 0 0 0 XM_601821.1 BOSTAUV1R437 PREDICTED: Bos taurus vomeronasal 1 receptor bosTauV1R437 (BOSTAUV1R437), mRNA. 1e-59 233 82.68 0.409252669039146 NM_053224.1 Vmn1r54 Mus musculus vomeronasal 1 receptor 54 (Vmn1r54), mRNA. 9e-24 114 75.00 0.329181494661922 0 noncoding 0 0 0 0 0.00976245555558011 0.932549575387532 -0.0274528341597171 0.664268173660059 GCATAAGACAGCATCTTTACTTCCCTGGTGGCTCAGCTGCGTTCTGAGACCCAAAGATGTCTGTACCTATGAACCCCACGGCTACTAGCATGACTATGTGGATTAGGGCCAAGTGACTAATCGTCAGATCCAGTGGGCTCGGGTCTGTGCTCGAGAAGGAAGGTGTAGACGTGCAAGAGAAGAAGGATGGTGTCGGCTGAGATCCCAATACCAACCTCGCAGAAGAATGCATTTCTTACAGCAAAAGAACTGGAGGGTTTATCTTTATCCATCTCTATGGGGACATATATTTGTAGTAAACATCTGAAGAGAAAAACAAGAAAAATTCTCTTTACCACAAATATTACCTTCACCATTTTCAACCAACTCTATTACCATCATGAAAACACGTGGACTGATCCAAATGCATCCGTGTTCGGGTCCACGCATCCATGGGCTTGATACTCAAGTCTGCCTTCGCGCCTACCTGGATGCCGTTACGTTTCTCTCCCCCAGCCCACCCCTGCGCAGCCCATCCACGGTGGATAATGTACCCCACTACTGGGCTGGGCTCTAGCGGCAC TCONS_00127633 TCONS_00127634 s 3' 7783 TCONS_00127633 TCONS_00127634 s 3' 7783 EMBV3_09966 TCTTAAGAAAAAGTTTCAAACACCTCCAACCGACCGGGTACTGGGGCCCCGGGCGCCGGA Gene GeneID:100296613|LOC100296613:XM_002686806:186_cdna Constitutive 0 NULL GeneID:100296613 4 GENE LOC100296613 NULL hypothetical protein LOC100296613 EMBV3_33970 TGGCAGGGCAAGGTTCGGGATCATGAGTTGGTGGAGAGAGACTTTGAACGAGAGTATGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18107 TTACTAACCTGAATGACTACCGAGAGAGTGTCTTCAAGCTCCTGCCCCAGCTGACCTATC Gene GeneID:100336783|LOC100336783:XM_002689732:91_cdna Constitutive 0 NULL GeneID:100336783 8 GENE LOC100336783 NULL acidic (leucine-rich) nuclear phosphoprotein 32 family, member B-like EMBV3_13651 GGGCAGCTACTGCTCTGTGACCTTAAAATAACCCAGCCTGTGGAGCTCTTGGCCACACTT Gene BVV0101_038646 + 0 NULL GK000021.2:22213773-22264397 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22405 ATGATCTCATTATAACATAAAGCAGCATGAAGACGTGAAGAACAAAGAAGGTGGAAATGT Gene BVV0102_095758 + 0 NULL GK000005.2:71811537-72049627 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21968 GAAAGTCTGCATTGTAGGCTCTGGCAACTGGTGGCTGTCCCTGATGTGGTCCAGGCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36974 TGTGGAAAGGAAGGCAGAATCAAGTACAAGAATGTGAGGAAATCATCAGGAATGGAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29658 CGTCCAGTTCTGCTTACACTTCCCATGATCTATCTCGTCTATCGCCTACCATTTTGCCAG Gene GeneID:785443|LOC785443:XM_002693238:494_cdna Constitutive 0 NULL GeneID:785443 15 GENE LOC785443 NULL similar to olfactory receptor, family 52, subfamily J, member 3 EMBV3_15080 GTGCTGTGGCAATGATGTTGTATTTTTAACGTATTTTTGTGTTTCTTCTGGCTCCCCCCC Gene GeneID:512359|LOC512359:XM_002688360:170_cdna UTR3_Alt 1 NULL GeneID:512359 6 GENE LOC512359 NULL similar to Ankyrin repeat domain-containing protein 56 EMBV3_14950 TGAGTACGACCGGAGGTTTGTGGGCTTTGGCTGGAACAAGGTGGCTCACATCATGGAATT Gene GeneID:506466|LARGE:XM_002687674:57_cdna UTR3_Alt 2 NULL GeneID:506466 5 GENE LARGE NULL like-glycosyltransferase EMBV3_14462 AGGAAGAAGCACTCCAGAGACGACTCAGTGAGAGGCGCAAAAAGGCTTCAGCATGGGAAA Variant GeneID:519337|LMBR1:XM_002687057:178_cdna 758^838 1 EMBV3_07064 GeneID:519337 4 GENE LMBR1 NULL limb region 1 homolog (mouse) EMBV3_14141 AAACCATCTCGCCAGAGCACGTCATACAAGGCTAGACAGCAACAAGCAGAATTGGCCCAA Variant GeneID:613828|DR1:NM_001046519:192_cdna 285^448 2 EMBV3_04319 GeneID:613828 3 GENE DR1 MGC128978 down-regulator of transcription 1, TBP-binding (negative cofactor 2) EMBV3_35809 GCTGTTGGGCTCTTTCCAAATTTTAACACAAAGAAAAAGGGAAGTTAAAAGGCAGCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33878 TGCTCCACAAGTCGGCCTTGGCATCATAATGTTGAGACATGATAGCCTCAGGAGCCATGT Gene BVT0102_243602 + 0 NULL GK000019.2:34386585-34421832 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093395 TCONS_00093399 TCONS_00093391 TCONS_00093393 TCONS_00093390 TCONS_00093398 TCONS_00093396 TCONS_00093400 TCONS_00093389 TCONS_00093397 TCONS_00093394 TCONS_00093392 TCONS_00093401 1 XLOC_057134 Coding TCONS_00093395 XLOC_057134 Coding Coding ULK2 19:34405382-34445364 j TSS70065 1317 1 TCONS_00093395_3 387 15 0.967434531402416 0.0030686997859262 0.00239593255828822 0.00154192911107273 0.00104538170465538 0.000693870382055232 0.000329431984331334 0.00173535367458961 0.00158408960251135 0.00126644710003458 0.0007363236360517 0.000253071972833968 1.06965043527089e-11 0.00120899685949345 0.00167596497522901 0.000408768329674789 0.00055502287228502 5.04866754924853e-92 1.77768696529692e-167 0.000691814613328314 0.00499462055540357 1.18442535850569e-33 0.000142298639019772 0.000614176207724338 0.000483456273104065 0.00152260262594812 0.00124772799272014 0.00168843921592966 2.07535096193421e-57 0.000140862732491366 1.21482976248961e-16 XM_005220405.1 ULK2 PREDICTED: Bos taurus unc-51-like kinase 2 (C. elegans) (ULK2), 0.0 2370 100.00 0.996962794229309 NM_001142610.1 ULK2 Homo sapiens unc-51 like autophagy activating kinase 2 (ULK2), 0.0 1833 90.44 0.996962794229309 TCONS_00093395_3 sp|Q8IYT8|ULK2_HUMAN ULK2_HUMAN Serine/threonine-protein kinase ULK2; 0.0 720 96.63 0.994832041343669 4 coding CGCGGCGCTTCCCGGTTTCTGCCCGGCCTCTCGGCATGAGCGCCCGCCCAGGCCCGGGGCCGCGGCTGCCCCAGCTCGGCGGCCGGCGGGCGCGCTCGGGGCCGGCGGGCCCGCGGTGCTGATCGCCGCCCGCCCGCGCGACCCCGGGGCGCGGCCATGGAGGTGGTGGGCGACTTCGAGTACAGCAAGCGGGACCTCGTGGGACACGGGGCCTTCGCCGTGGTCTTCCGGGGGCGGCACCGCCAGAAAACTGATTGGGAGGTAGCCATTAAAAGTATTAATAAAAAGAACCTGTCAAAATCACAAATACTGCTTGGGAAGGAAATTAAAATCTTAAAGGAACTTCAGCATGAAAACATTGTAGCACTCTATGATGTTCAGGAATTACCCAACTCTGTCTTTCTGGTGATGGAGTATTGCAATGGTGGAGACCTGGCAGATTATTTGCAAGCTAAGGGCACGCTCAGCGAGGACACCATCAGAGTGTTTCTGCATCAGATCGCAGCTGCCATGCGAATCCTGCACAGCAAGGGCATCATCCACAGGGACCTCAAGCCCCAGAACATCCTGCTGTCCTACGCCAGTCGCAAGAAGTCCAGTGTCAGTGGTATTCGCATCAAAATAGCTGATTTTGGTTTTGCTCGTTACTTGCATAGTAACATGATGGCTGCCACACTATGCGGGTCCCCAATGTACATGGCTCCTGAGGTTATCATGTCTCAACATTATGATGCCAAGGCCGACTTGTGGAGCATCGGGACAGTGATATATCAGTGCCTCGTTGGAAAGCCACCTTTTCAGGCTAATAGTCCTCAAGACCTAAGGATGTTTTATGAAAAAAACAGGAACTTAATGCCTAGCATTCCCAGAGAAACATCACCTTATTTGGCTAATCTTCTTTTGGGTTTGCTTCAGAGAAACCAAAAAGATAGAATGGACTTTGAAGCATTTTTCAGCCATCCTTTCCTTGAGCAAGTTCCAGCAAAAAAATCCTGCCCAGTCCCGGTGCCCATGTATGCCGGCTCTGCCTCTGGAGGCTCCTATGGCAGCTCTCCGTCCTGTCGTTTCGTGTCTCCACCATCCCTTCCAGATATGCAGCATATTCAGGAAGAAAACTTATCCTCCCCACCATTGGGTCCTCCCAACTATCTCCAGGTGTCCAAAGATTCTGCCAGTACTAGTAGCAAGAACTCTTCTTGTGACACGGATGACTTTGTTTTGGTTCCACACAACATCTCGTCAGACCACTCATATGATATGCCAATGGGAACTGCTGGAAGACGTGCTTCTAATGAGTTCTTGGTGTTTGGAGGGTGC EMBV3_35594 GACAGCAATGAAAAGCCACAAGTTGACCAAATGGTGGAGGAGAGTGAGGAACGGCTGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34250 AAGCTTTGGGCAAGTATGGCCCTGCTAATGTGGAAGACACCACAGAAAGTGGAGCTACAG Gene GeneID:520875|EEF1B:NM_001014936:26_cdna Constitutive 0 NULL GeneID:520875 2 GENE EEF1B EEF1B2 eukaryotic translation elongation factor 1 beta 2 EMBV3_32529 TTTGGAGAGCCTAGGAAGCTCATCACAGAAGATCTGGTGCGGGAAGAGTACCTGGAGTAC Gene GeneID:100337211|LOC100337211:XM_002700260:2_cdna Constitutive 0 NULL GeneID:100337211 X GENE LOC100337211 NULL melanoma antigen family B, 4-like EMBV3_27253 GTGGAGAAACTACATCACCTGCAGCCCGCGGTCTGTATGCAGTGAAAATTCGAGCTGAGG Variant GeneID:508130|MCAT:XM_002687960:62_cdna 457^544 1 EMBV3_26016 GeneID:508130 5 GENE MCAT NULL malonyl CoA:ACP acyltransferase (mitochondrial) EMBV3_20283 GCTGGAAGCTGGGTTGTTGGGCTGCGGAAGACTGTGGGCTCCTTCAGTGCCATGCATCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16463 CGAGAGGCTTTGGATGGAATCGGGGACTTCGATTCTCACAACTTGGCAATGCCACCGGAT Gene GeneID:100335953|LOC100335953:XM_002696525:150_cdna Constitutive 0 NULL GeneID:100335953 21 GENE LOC100335953 NULL hypothetical protein LOC100335953 EMBV3_09236 CAGTCGACGGCTCCACCATGATGAAGGCAGTGGTCCACGCCATGGACGGCACGGCAGAGA Variant GeneID:786096|PALM:XM_002689163:190_cdna 584^715 1 EMBV3_10083 GeneID:786096 7 GENE PALM NULL paralemmin EMBV3_09710 TTGGCTGCACAAACTGGTGGCTTGAAAGGCTTCTGCCACTTCCCAAGACACCCAAACACA Gene BVV0102_426818 - 1 EMBV3_09329 GK000019.2:20815215-20828075 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36157 CTCTGGGTCCTATTCGCAGTTTGCAGGCTGTTGACATTGCCACCATAACACCTGATCAAG Gene GeneID:538986|FIGNL1:XM_002686633:29_cdna Constitutive 0 NULL GeneID:538986 4 GENE FIGNL1 NULL fidgetin-like 1 EMBV3_06583 TTCATCTGTAGCATCCAAGACTTCAAACTGAGTAAGAGGGACCATCTACTCATGAACGTC Variant GeneID:535394|RERE:XM_002694049:136_cdna 836^961 1 EMBV3_40471 GeneID:535394 16 GENE RERE NULL arginine-glutamic acid dipeptide (RE) repeats EMBV3_28106 GATCGGACACGACTTAGAGACTGAACAACAAGCTCTCAGCACAGTGCCTGACATATCAAA Gene BVV0101_076139 - 1 EMBV3_02767 GK000015.2:73717840-74127287 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31398 ATGTCCCTCATTGCTGCTGGCTTCACAAGGAGAAAAGTCAAGAAGCAATTGAAATTACAA Variant GeneID:506787|PDE8A:XM_002696585:22_cdna 568^685 3 EMBV3_31051 GeneID:506787 21 GENE PDE8A NULL phosphodiesterase 8A EMBV3_20992 GGTGCTCCACCATCAGTTTGTTATCCCGGCTCTGAATGAAGCTGCCACTGGTCTGTGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02115 GAGCTGGTGATCTTTGCTTTCGGCATCATTATGGGCATCAGCCCTCTCACATGTATCCTC Gene GeneID:616125|LOC616125:XM_002688564:226_cdna Constitutive 0 NULL GeneID:616125 7 GENE LOC616125 NULL similar to olfactory receptor 1357 EMBV3_10661 ACACCATTCGCAGAATTCGAAGTAGTAAGGACAGTTGGGACATGCTGGGAGTCAAGCCTG Gene GeneID:540033|DNAJC27:NM_001098109:198_cdna UTR3_Alt 3 NULL GeneID:540033 11 GENE DNAJC27 RBJ DnaJ (Hsp40) homolog, subfamily C, member 27 EMBV3_12739 CCCTGCTCCCACAAACTGACACAGGCAGGGGCTGCTGGACTGCAGAGTTTATTTTTGTAT Gene GeneID:512498|MAF1:NM_001034424:62_cdna Constitutive 1 NULL GeneID:512498 14 GENE MAF1 MGC127274 MAF1 homolog (S. cerevisiae) EMBV3_04075 CATGGCGGTTGTATCTCGGCGGATCTGTCTTCTGCTAGTTTCCCTCACATACCTCTATAG Gene GeneID:100300446|LOC100300446:XM_002693684:332_cdna Constitutive 0 NULL GeneID:100300446 15 GENE LOC100300446 NULL similar to olfactory receptor 154 EMBV3_24205 GGAATATCTAGCCTTGTAGTGTCTTATTGCCCACCGATCACCAGGGAGTAAAGGGATGGC Gene BVT0102_091966 + 0 NULL GK000002.2:121638420-121648040 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106440 TCONS_00106443 TCONS_00106441 1 XLOC_062802 Coding TCONS_00106440 XLOC_062802 Coding Coding S100PBP 2:121646102-121677134 j TSS78346 2735 1 TCONS_00106440_3 231 5 0.912023460410557 0.000757276848639414 2.89660739906447e-07 0.00196356830223681 0.000731861819995433 0.00144519595000102 0.00138330991125697 0.00240767832452152 0.00564010567179045 0.00122692406169012 0.00106203542390375 3.16786093909212e-05 1.52681430341243e-05 0.000106879259575081 0.00139529558369647 7.29186831412654e-16 0.000269461211167292 5.96079710678855e-30 0.00182148676463565 0.00675766310185267 0.00104168554555896 0.000514918044977109 0.000805247703445105 0.000776392813324006 0.000924405774396177 0.00448906801998402 0.0078832518093284 0.00288292747039547 0.000242683416278369 6.99375673972232e-05 0.000603448799011258 XM_005202989.1 S100PBP PREDICTED: Bos taurus S100P binding protein (S100PBP), transcript 0.0 3310 100.00 0.670566727605119 NM_022753.3 S100PBP Homo sapiens S100P binding protein (S100PBP), transcript variant 1, 0.0 978 76.96 0.46508226691042 TCONS_00106440_3 sp|Q3MHH3|S1PBP_BOVIN S1PBP_BOVIN S100P-binding protein; 1e-147 423 100.00 0.896103896103896 1 coding 0 0 0 0 -0.0514640641661706 0.675220087241589 -0.0162342047297404 0.802376745649265 GGATGGGGCAAGATTAGCAACGGGTTGATAGTTGTTGGGGCTGGGCGATGGGTGGGAGTCAATCATTTTGACAAGTCTCCTGAAAGGAACAGCTAGCAGGAGCTGAACCCTTTTTCCATTTGGTCTCGTGGCAAAGGCAGAGATCACACCAGCAGCTCCACACAGTATTTCTGCAAGGTAAATTTCCAGAAGTGAAATTGCTGAGTCAGATGCTATGGCCAAATTACTCTCTACAAAATATTGTACTGACTTACACTCTCACTGATAATATGATGTGCTCACTAGTGCCCTCTGAACAGTCTTCTGGTACCTCTCTCTTGCCTAAAGACAATGCTCCTTTTTCTTGGAGTTCCTTGGATGAGGATGAATTGGATGACTCCTTGCTGGAGCTATCTGATGGAGAAGATGATGGCCATTTCAGTTTCACAGAGGAACAGATTCAGGAACTCTTGAAGGATGATGACCTATCAAATGAGCACTTTCCTTGGGGAGGAGGGTTGCCTAGTGATGACAGCAGGAATGTTGAGAAGGGAGAGAAAGGGAGTCAAATTCCACTTGACACTCCCCAAGAGAAAGATTCACCGTACAACATGGGACCAGAAGCTGAGACCCCTGACACATTCAAACTACCTCAACTAACTACATCAGTTGGTCATGGACCAACTCCTGCTAAATCGTTGAACAGACGCTTTGCACTAGAAAAGAATCTTATAAAAGTTACAGTTGCACCATTTGATCCAACAGTTTGTGATGTTGCACTTGATAAGGACAAGACTTACGTGTCCGAAGTTACATCCAGAGTTACTGAAAAACCCTCCTCCCTTGGGGAAGAGATGAGAGAAGATGATCTTAGCCCAAACGAGAGCACACTTTGCACAGAATCTGAAGGGATCAAAGACTGGTGACTAACAACCTCTTTTGATTTGTGGTATTGTGACTGATTGCCTTCTCTGTCTTTCTTCAAGGATTTTCCTTCCTTCCTTGTTTCCCCAGTGATCTTAGGGCTCTACTGGCATATTCCTGTATCCTGTTTGACATAGAGATGCCTCTTAAGAACAGCCTCATTGCACTCTTTACTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGACAGGCCAGAAGGCAGTGCTATTGAGAGGTGTCAGTTGGTCTTCAGTCTCATCTGCTGAACCCAGCTTTGAGTATGAGTTGGCGAGTTAGTGAGCCTCCATCCTATGGAAGAGACTTTGGGAAGCTGTCCTTTGTCTCCGTTATTAGTTAATAAGAGGTGCCTTTTGATCCAGATGTTACCACCTCCTCACTTGGTCAGAGGATGTACAGTTTTACAAAACTACTAAAGTGGATTTAAAATAGTTTTGATGAAGCCGGTGCACAAAGCATTACCTGATCTTAAGGAATAGTACTCTAAGCTAAGTTGACGAGCTTTGTGCAGCTACCTTAATGTCTTTGGAGTTTGTTATTCTCTTTACAGACAGCTCTAGACATCTCTTGGGAGATTTTGCAGTTTGGCATCTGTGCTCTTGTTCACTCTCTGTGAAGGTAGTACCTAGTTGCTATGGCACAGCCTGTGATACTGGGCTCGCTGCCTGTCAGGTTTTGTTGCTCCATCAGCCCCATCTTTGTCTGCAAGTAATCTAACATAAACATCCTACTCTGCTTTAGAAACTGACTTGGGAGAAACTTAGTCATTGTTATCAGTAAATTTAGATGGATGTCCCTAAGTGTTTACCATTTCTGTCCAGTCAAGGAGTCTCTTTTCTTGGAAATTTGGTTGCGAGTCTGGGGCCAAAATGCAAAGGAGAAGTTCTGTTCAAAGGCAAGAGTCAAAATCTGTTATTTCAGTTGGCATTTACAACGTCAGTCACTTCTCCAAGTTTGCGTAAATCAGCTTGATGGAGTGGGACAGACGAACATCCAACTTTGAAACTATAGCATAGTTAGAACTAAGTATTGCTGGAATATCTAGCCTTGTAGTGTCTTATTGCCCACCGATCACCAGGGAGTAAAGGGATGGCCGTTGGCTTGGGCAGAAGTCTGAAGTCTCACGCTCTTGCCTCCCTGGTGCAGGAAGGTCTAAGACTGACATGTCACGGGAGCATCGCCTTTGCCAAATCTAATGAGTGATGGGTTATCTTGAAAATGTGACAATCACATTTCCTCTTTGCTCAAATAATTCTATTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTCTTGGACTGGGGGAGGAGAGAACTGTTCCCTAGCGGTTAACATGGTATTCTTTAAGAAGAAAAACAAAGCCAAAGAAAACTCATTATCAGGCATGTTCGCCTTAAAGATGGTAGTGCTTAGAATCTGGCGTTTGAATTTGTTTTTAAACGCTACGTATCTCATATTTGGTGTTGGCCTCTTAAATCTAATTTTTGTGTAGAATTCTTGCCATATTGTTTTATTTGAGTAAGGGCTCTGTGCACTGAACTGCCTACCAAGCTTTCTTCATCTGTGATGACATTCTCACCACAGGGGTCTTAACAGTGCAGAGTAGACTTGTGCTGTTTACATAGTTCACTTGTAACTAAAAGAGCCTGAAATAACCTGTAGTTTTGCATCTAATTCGACCCCAGTTTACTTCGGTTGTTGTCAGGATCAATTATGAAACTGAAGTTTGGTGCCTCCTGTGTATCATGTTTTTCCCCTGTAGCAGTTGTGTTTAATGTCATTAAGAAGAAATAAAAGTTCTTGTCAGTGGCTTAT EMBV3_16987 CGAAACGCTGCGGGCGCTGCACGCCGCCAGCGGCATCTTGAATGTCCATCCCAGTTGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42671 TAAACACTTAGATTGAAACGCTCTGGATATAGTTGCCAATTGCCGCACATGACCCTGCAG Gene BVT0102_329325 - 1 EMBV3_26503 GK000009.2:77375548-77491105 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13361 GTCTGCCCTGCTTCCTCAATGCCTGCTTCTCCCCACTGCTGTTTGATAATGGACATCCTA Gene BVT0102_220782 + 0 NULL GK000021.2:70714148-70716851 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121976 TCONS_00120285 2 XLOC_073546 XLOC_073123 Coding TCONS_00121976 XLOC_073546 Coding Coding TMEM179 21:70715724-70727398 = TSS90745 2830 1 TCONS_00121976_1 232 4 0.757902852737086 0.00150322971960768 0.000639122458820797 0.00107253461935862 0.00116720215820886 0.000785062847724891 0.000427223891992617 0.000972582910445925 0.000267520486598742 0.000755555772997143 8.72267933562865e-06 3.2352677583346e-06 0 6.99575282923477e-05 5.87003478163455e-05 0.000178470847522524 9.33262666079918e-05 9.9796227356099e-05 0.00011525534824357 0.00137336701997196 0.000569578280539132 0.000622815048330706 6.03082714886599e-05 3.24042824288339e-06 9.47801487168958e-05 0.000878357242068768 0.00089375263633514 0.000440988654071238 8.48500423304531e-05 3.06105636324834e-05 0 XM_616823.7 TMEM179 PREDICTED: Bos taurus transmembrane protein 179 (TMEM179), mRNA. 0.0 2928 99.39 0.582685512367491 XM_005267633.1 TMEM179 PREDICTED: Homo sapiens transmembrane protein 179 (TMEM179), 0.0 1068 93.04 0.252296819787986 TCONS_00121976_1 sp|Q6ZVK1|T179A_HUMAN T179A_HUMAN Transmembrane protein 179; 1e-150 423 95.28 0.995689655172414 0 coding 0 0 0 0 0.0175143031408204 0.912265856703769 -0.0515815886926307 0.328192772832608 GGCGGCCCCGGGTCCCGGCCGGCGCCCCTCGCCCCGCGTCTCCAGCCGGCCTCGCCGTGTCCTCCGGCCGCTTCCTCGGCCCGCCCGGCCTCGCCATGGCGCTCAACAATTTCCTCTTCGCGCAGTGCGTCTGCTACTTCCTGGCCTTTCTGTTCAGCTTCGTGGTGGTGGTGCCGCTGTCTGAGAACGGCCACGACTTCCGCGGCCGCTGCCTGCTCTTCACCGAGGGCATGTGGCTGAGCGCCAACCTGACGGTGCAGGAGCGCGAGCGCTTCACCGTGCAGGAGTGGGGGCCGCCTGCCGCCTGCCGCTTCAGCCTGCTCGCCAGCCTGCTTTCTCTGCTGCTTGCCGCCGCTCACGCCTGGCGCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTCCTTCCTCTACGCCTTCCTGAACCTGCTGGTCAGCGCCTTCGTGGTCTTCCTGGTCTTCATCGCCAGCACCATCGTGAGCGTGGGCTTCACCATGTGGTGTGACACCATCACCGAGAAGGGCACCGTGCCCCACAGCTGTGAAGAGCTCCAGGGCATCGACTTGGAGCTGAACGTGGACAACTCTGCTTTCTATGATCAGTTTGCGATTGCCCAGTTCGGCCTCTGGGCCTCATGGCTGGCCTGGCTGGCCATCACCGTCTTGGCCTTCCTGAAAGTCTACCACAACTACCGCCAGGAGGACCTGCTGGACAGCCTGGTCCATGAGAAGGAGCTGCTGCTGGCCCGGCCCGCCCCCCGCGCCGCCTTCCAGGAGAAGAGCGCCGTCATCTAGGCCGACTGGCCCCCACCTGGGCTGGGGGCACGTGCTGCCCTGGGCCGCGGCCCCGGTTCTGCCCAGCCCCCACGCCTTGCATGCCTCCCCTCGGCTCTGTGTGCAGTGCTGAGCGACCCCCTCACCGGGCACCCGGTTCCCACCCCGAACCGGCCTGGCAGCTGGCGGGGCTGGGGCCACCCTCAGCCCTGGGCCGGGGGCGCCTCCAGGCTCCATGCAGGGGCCTCCGCCTGTCCCAGGGGTGAGCCTCGGGGAGGCCCCCGGCCAGTGGGTGTGCTGTGGTCACGCCTCCCTGCGGGCCTCGGCTGGATGCCATCTGTGTGACCTGCCAGGTCCCGTGGCAGCAGCCTGTGGCCCCAGGGTGACCCCAGTGGCCCACGATGGCCACACGTCACTCTCGTGACCCACTCCTGAACCGTGCGGGGGATGAGGAGCCCGCCACCTGCGGGCCAAATGCTGCGTGTGGGAAGGAGCCCCTCGCCCTGGTGGCCCCCAGGGCTGAGAGCCCCTCTGCGCCTGCTCCAGAGCCCCTGGGAAAGCACAGGGTGGTGGGTTGGCCTGGAGTCAGGCCGCAGCGGTGGTGCAGACTTCCTGGGGGCCTGGCCTGGGGAGGCCCCAGGGCCCCGCTGTGGGCTGGGCCTGTGCTTGTGGGGTGGAGACATGGGCTCCGCATGTGGGGGTGACATCTTGCAGGGGAGAGGGGCCAGGTGCCACGGCGGGTGTATGAGTGCATGTGAGGCGTGTGAGGGTGTGGACGTGTGTATGATGTGCGTGCACGTGGTCACAGCATGTGCGAACATGCGTGAGTGTGCACGTGAGCTTGCACGGCGAGGTGTGAGCGTGTGTGAATGTATTGTGTGTACGCATGAGTGTGCCTGTGCACAAGTGTGTGTGCGAGTGTGCGTCTGTGGGTAGAGACTGGAGCGGGCAGCTATCTGCACCCCCATCCCCAGGGCCCCCCATACCCCAGAGGAGGGGCCTCTTTCCCATCTCAGGGGGCCCGAAGGGCGCAGTCCCGCCCCCGTGGCAGCAGGTGGAGGACCTGGGGGAGGACCTGGGGCCTGGGATTCGGTGCTGAGCCGCCTGGGGCTGCCTGGCTGTGGACGCCGCTCAGGGCTCCCAGCTCAGGAGGCAGGCCTGGCCTGTGTGATCATTTGCAGTGGCTCCATCTCCCTGAAAGGAGGGGCCCGGGTCTGGGGACCCGTGTGGCAGGCGGCCTGGCCCTGGGGAACGCAGTGCAGGTCACTTGTCTTGATGTGCTCGGCTGGTACCTTTCCGGAGGGGCTCGGGGTGGAGGTGATAGAGGCTCCTGGCATGTTAGATGCTCTGGCCCTTGGCCTGGCTGGGGGTTCTGGCCAGAGGATCAGGGACCTTGGGGAGGGGTTTTGACAGAACCTGAGGCCCCCAAGGGGATCTGCCTGCCCAGTCCACTGGTCCCTGAGAGCTCCTGGTCTGTTCCCCACAGAAGGGGGTGGCTCTGCCTTGTGCCCCAGCAGGCGGCAGCCATCTGGGCCCTGGAGAGCGGAGCAGGCCCTGGATGTGGGCTTCCAGACTGGAGGCTCTGCTGCAGGTGTGGCTGTGCCGGGGCACTTGTGGGTGGCCTGGAGCGTCTGGGCAGCCCTTCGGTCAGACCAGCAGAGACCTGTATCCACGTACAGGGCCACCTGCAGAGCAGAATGGTCGCTGACACACAGGCTGTCGTGGGCCAGCTGCACTGGCACCCCCAGACTTCCCATCCTGGGGGCTCCTGGGAAGGGCACTGCTGGCCTCGGGGAGGGTGCCCTGGGACAGGAGCCGGTGGCCTAGAAGTGGGCTGGGAGGGCCCCCTGGGGCTGGACAGGAGAGGCCGGCCGTGCCCCAGGGCCCCTGAGGAGGGTCTGCCCTGCTTCCTCAATGCCTGCTTCTCCCCACTGCTGTTTGATAATGGACATCCTATTTTAATTCTACTCCAGCTTAACTGAAAGTGAAAGGTCTTCAACGCAAATGTATTTATTTCTCAAGTCAAAATAAAAACAAAAATACCTGAGCCTCTAATG EMBV3_14295 AAGGAGGTCCTGGAGTACAATGCCATCGGAGCTCCAAGCCTTCTTCCTGGTGTCAGATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01497 CGCCACATTCCTGGGCACAAAGTGCCTGATCTCTAAATGAAGATGTTAAAACACGGAAGG Gene GeneID:528668|KLHL5:XM_002688227:141_cdna Constitutive 1 NULL GeneID:528668 6 GENE KLHL5 NULL kelch-like 5 (Drosophila) EMBV3_34504 CTCCTCCTGCACCGCGGCCCCGGGGACCAGGTGGTTTCCTTTATGAAGTCTCCAGTGGGT Variant GeneID:784639|TMEM159:NM_001080361:22_cdna 74^270 1 EMBV3_06624 GeneID:784639 25 GENE TMEM159 MGC128035 transmembrane protein 159 EMBV3_32952 TGTTCTCTAAACAGGTTGGTGCAATACCACCAGTGGGCAGGGTTTTTAGTGGCTACTCAC Gene BVT0102_169060 + 1 EMBV3_43242 GK000010.2:54043421-54105428 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014016 TCONS_00014018 TCONS_00014014 TCONS_00017324 TCONS_00014013 TCONS_00014015 TCONS_00014012 2 XLOC_008233 XLOC_009008 Coding TCONS_00014014 XLOC_008233 Coding Coding MNS1 10:53917123-54044830 j TSS10251 3175 1 TCONS_00014014_3 453 13 0.975240004385072 0.0022582236503214 0.00138472632622185 0.000736007923488568 0.000728858137975419 0.000833165478331837 0.000422075774720526 0.000998651393300296 0.00187551853264052 0.00109769858797887 0.000119064217161758 5.47427043888178e-06 4.89764115930053e-05 1.02822708380737e-11 7.82263405560228e-17 0.000962822494690306 7.01026177063339e-13 2.20606779634448e-29 6.47493755108324e-05 0.00135717489044735 0.00202304648519899 0.000585755496639145 1.0911604487908e-05 4.4088562674942e-24 6.79338614706479e-09 0.000752365239800907 0.00142699177951615 2.93103054189416e-08 5.14228124734707e-13 2.1654401698603e-05 4.86592527569066e-05 XM_005211695.1 MNS1 PREDICTED: Bos taurus meiosis-specific nuclear structural 1 (MNS1), 0.0 3256 99.94 0.569133858267717 NM_018365.2 MNS1 Homo sapiens meiosis-specific nuclear structural 1 (MNS1), mRNA. 0.0 1932 88.67 0.470551181102362 TCONS_00014014_3 sp|Q2KIQ2|MNS1_BOVIN MNS1_BOVIN Meiosis-specific nuclear structural protein 1; 0.0 784 98.46 0.997792494481236 1 coding 0 0 1 1 0.0770934747975375 0.774198680281209 0.0300048869238431 0.536951505954472 TTCACATCGCGCCCCGGAGACAGATGCTGCGGGCTTCTCTCTCAGCTTCTATTCTGCCGTTGCTCCGCCCCAGGGTCTGCTCTTCCGCTAGGGAAGCCAGGCTGGGCCCTGTTTCTGGGAAAAGCAGTGGGTGGCTGAACGAACTCAGACCCGACAGGCCCAGAGCTTCCAAGCTTTCCCCGGCCTGGATTTTCAGCCTCCCACCTTCAACCTGACTTCTAGCTTCTGATGGCCATGTCAAGGGGAGCTCTGAAAGTGGCATCTGGAGGAAAAGGGAGCCTCTTGGGCCCTCCAGCAGCTGGTGTCTAAGGAAACTTTCAAGGCACTGTGCCATGCCCTGTGCAGGAGACAGAGGTTCTCAAGAGAGGGGCCTGGCTCTCCTGGACCTTTCACTGAGGCATGGAAAATAGGATGCATGCCCTAATCACCAAGGGAGGGAACCCAAGAGGAAGGCTTCCATAAGGAGAACTTTGAGCTTCAGTGAAAGGCATCAGAAATTAGTAGATATAAACTATTGCAAAAAATTGCATGTCGAGGCACTACAAAGGCTACAGAATCAAACTAGGGACCAAATGGTGCAGAACGAGAATGATGACCGGGCTGAGCGCAAAAGGTTCCTCAGATTATTACAGGATGAACAATTTGAGCTGGATATGGAAGAGGCCATTCAAAAGGCAGAAGAAAACAAAAGATTGAGGGAGCTCCAGCTTGCACAAGAAGAAAAATTGGCTACGGAACTGGCAAAACTAAAACGTGAAAGTCTAAAGGATGAAAAGTTGAGGCAACAAGTAAGAGAAAACAGTGCTGAGCTCAGAGAATTGGAGAAGAAATTAAAAGCAGCTTACATGAATAAAGAAAGAGCAGCTCAAATTGCTGAAAAGGATGCCATTAAATATGAGCAAATGAAACGTGATGCTGAAATAGCCAGAACTATGATGGAAGAGCACGAGAGGTTAATAAAGGAAGAGAGTGCTGCAGAGGACAAACGAAACCAAGCAAAAGCACAGTACAGTCATGACTTAGAGAAACAACTGGAGGAACAAGAGAAGAAAAAGCAGGAAGCTTATGAGCAGCTGCTGAAAGAGAAACTCATGATTGATGAAATTGTTAGGAAAATCTATGAAGAAGATCAATTGGAAAGACAGCAAAGGTTAGAGAAAATGAATACAACTCGAAGGTATATAGAAGAGTTTCAGAAAGAGCAGGCTCTCTGGAGAAAAAAGAAACGGGAGGAGATGGAAGAAGAAAATAGAAAAATAATAGAGTTTGCCAAGTTGCAGCAACAAAGAGAAGAAGATCGAATGGCAAAAGTTCAAGAAAGTGAAGAAAAAAGACTACAGCTTAAAAATATGCTGACTCAGAGGTTGGAAGAAATGCTGCGGCAACGTGAAGATTTAGAACAAGTGCGACAGGAATTATACCAGGAAGAACAAGCTGAAATATATAAGAAGAAACTAGAAGAAGAAGCAGAAGAGAAATTGAGAAAGCAAAAGGAGTTGAAGCAAGATTTTATGGACCAAATGGCCTTGAAGGAATTAATACTTCAGGCGGCAAAAGAGGAAGAGGAGACATTTAGAAAAGCCATGCTGGCAAAATTTGCTGAGGATGATCGAATAGAATTAATGAATGCGCAGAAGCAAAGAATGAAGCAACTAGAACACAAGAGGGCCGTGGAAAAACTTATAGAAGAGCGCCGCAACCAGTTCCTTGCAGACAAACAACGTGAACTGGAGGAATGGCAGTGGCAGCAAAGACGACAAGGATGTATAAATGCAATTGTTGAAGAAGAAAGACTAAAACTTCTCAAAGAACATGCTACAAAACTACTAGGATATCTCCCTAAAGGAGTATTCAAAAATGAGGATGATATTGATATGCTTGGTGAAGAGTTTAGAAAAGCATATCAGAAAAGGAGTGAAATTTGTGAGAAGTGATACCGTCAAGGAACTTCACTTCCTTGATTTGGCTGGGGAAGACTCTTCCTATTATGAGAGGAGAAAAGTACAGAGTGAGGAATTTCAGAGTGCTTTATTACCTAATGCAGTTATCAATAAGAACATAGAAAGTTTCTCTCAGGTAAACATCGTTTACAAACTAAAGCTAAGTCTCTAGAACATATTTTCTATGCATATGCAGCTGAAAGGGGCTAGAAGGTCATAAAAAAGATAAAAGAATCGAAAGTTCAATTTCTGTTGCTTTATTTTATAAAACATTGCTAATAATTAGGTATCAATTTTATATCCCCAAACCTAAATTTACTTTAAGAGTATATCCACCACACACTAGAGGTTTAAAAGTAGATCACTTATTAATTTCCCCATTCAAGTGCCTTCATAAATTCTTCTTCAGTGAAAGACAGCATCTTGGCAGCTTCAATATGCATCTGTGTTTAAAGAAATCAATATTGTCTAAGAGTAGACCACAGAACAATAGGAAATTTGTGAAAGTGCATGTATAATTCTAATTACAGTAAACAGGTTTAAATAGTAATTTCATTCAGTGAGTAGCCACTAAAAACCCTGCCCACTGGTGGTATTGCACCAACCTGTTTAGAGAACAATTCCATGTTGTAATACCTAATCTTTGCAAAAGGTGACAGTAGCAAAAACATGAATTCACATCCTCTTAACCACAAGGCAAACCTGTGTGGTGACCACAATAAAAGTGGTTTGGAATCAGTTTCACTCCAAGATTTCAAGAGGCAAACTGATCCCTTTTTAAGATTATAGTTATTTTTTATATTTGGTATTATTTTCTTTAGTTAGGGAGTATCCATACTGTATGGAAAAAGAACTAGTAAACGTTTCTAATTTACTTGCATCAATGTATAGATAACATTTTGTGACTAAGCATGGCAATAAAAACTATACCTGAAGGAGAAATACTAAATGTCTTAGTAGAAAGAGCCAAATAATATCCAGGATTTATTTTAACTTTGTTTAAGATAAACTCACCTTCTGCCTTTTTAAAACATCAATTAATTTTAACTGTTTCTTAAATCCTATCATTAATTCTCCTTTTTGTTTTTCTAGCTTCTTGTTTTCTGATTTTAATGCTTCGATTTTTTGGTGTTCTTCATTTGCTATATCCTGCAAAAGGAAAAAATCCTATGTATTCTTTACAGTATTTTAATGGAAAAATTATATCAACAATAAAAACTTAGGTTTAAGTTTCA EMBV3_42300 CTAGTTGGGAATAATTTTAAGTCTCACCTTCCCCTTTAAACTAGTATTTGTAATTGACTC Gene GeneID:615796|SFRS1:NM_001076394:48_cdna Constitutive 2 NULL GeneID:615796 19 GENE SFRS1 MGC139904 splicing factor, arginine/serine-rich 1 EMBV3_03510 CCGGTAGATAACTGTTCACACTGGGATGTTTAGGAGAAGTCATGGGTTGAGGTGTCATGT Gene GeneID:535887|PANK1:XM_002698345:54_cdna UTR3_Alt 3 NULL GeneID:535887 26 GENE PANK1 NULL pantothenate kinase 1 EMBV3_30937 TAGGATAGAGAAGGGGGCTCCTGAACTGGGAAGGAGAAGCATGTGGAGAGGGCTACCTGA Gene BVT0101_050875 + 0 NULL GK000018.2:50840532-50856448 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02396 ACTGATTACACCTTCCCACTTGCTGAAAAGGCCAAGGTTGAAGCAAAGGAGGAGTCGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41389 GGGGGGTGTTGGCGTCTGTGGTCCGGGCAGCTGGGAAGGCTTCTGTCTCTTTGGTTCCCC Gene GeneID:100336642|LOC100336642:XM_002700003:31_cdna Constitutive 0 NULL GeneID:100336642 X GENE LOC100336642 NULL hypothetical protein LOC100336642 EMBV3_16790 AAAGTCGCTCGCAAGTCGCTGGACCCGCTATATAACCAGGTGCTGCTGTTTCCTGAGAGT Gene GeneID:539592|RIMS4:XM_002692328:107_cdna Constitutive 0 NULL GeneID:539592 13 GENE RIMS4 NULL regulating synaptic membrane exocytosis 4 EMBV3_40254 ATCCTATCTGGAGCGGAGTGTGAAGGAAGCTGAGGACAATATCCGGGAGATGCTGATGGC Gene GeneID:616553|PFDN1:NM_001078062:38_cdna Constitutive 2 NULL GeneID:616553 7 GENE PFDN1 NULL prefoldin subunit 1 EMBV3_23171 AAGCCCTTGGTCTTTGTACACTGCCCCTACAAGGAAGAGGCACCTGATTAGTAACTGATA Gene BVV0102_040839 + 0 NULL GK000003.2:30563305-30666886 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169395 TCONS_00169402 TCONS_00169397 TCONS_00169401 TCONS_00169403 TCONS_00169396 TCONS_00169398 1 XLOC_103353 Coding TCONS_00169401 XLOC_103353 Coding Coding SLC16A1 3:30534266-30567360 j TSS126845 7514 1 TCONS_00169401_5 501 0.165956880489752 5 0.773094007796211 2.16203150658765e-12 3.68371932691846e-54 1.54967170062678e-12 1.52595649047332e-05 1.60059727493789e-17 4.141455140723e-15 7.21053941205556e-15 8.69670486268821e-13 1.04059299135374e-37 6.817383057363e-05 2.57091417913663e-05 5.6191257193217e-05 2.39945538714252e-16 6.23150008715048e-13 8.94541236705118e-05 0.00719209063138069 0.00194796696098358 0.00221039425206542 7.26700285256926e-14 6.44244689044511e-06 8.34777013935256e-14 0.00225877728547979 0.00252914329104882 0.00252051596291663 2.96611791817959e-21 1.2606641069255e-37 3.47988872832681e-26 0.000799286893350763 0.000323484117765385 0.000956187224595179 XM_005204092.1 SLC16A1 PREDICTED: Bos taurus solute carrier family 16, member 1 (monocarboxylic acid transporter 1) (SLC16A1), transcript variant 0.0 1.147e+04 100.00 0.846153846153846 NM_001166496.1 SLC16A1 Homo sapiens solute carrier family 16 (monocarboxylate transporter), member 1 (SLC16A1), transcript variant 2, mRNA. 0.0 3398 78.79 0.514240085174341 TCONS_00169401_5 sp|Q3MHW6|MOT1_BOVIN MOT1_BOVIN Monocarboxylate transporter 1; 0.0 1015 100.00 0.998003992015968 1 coding 1 1 1 1 -0.0334012711865571 0.872967721387531 0.0198643822288379 0.76575682053351 TAGTGGTGCCGGTGACCTTGGGAAAGTCGCTTCCCCTCTAGTCTTAAGTAGGCTCTTCAAGAGATGCTTGATCTGGGAAAGGGACGACGTGAGGTTGACTCACGTGGTGCCTTCAAGCTGCTGGCAGTGTTCTCCGAGGGTAGGGATTCAGGGCGGGAGTTATTTTGGACTCGTGGCACGCCCGCCCCAACCTCCTCGGCCAGCCAATCCTTGTCCCACCTGGTGACTTGCGGCAGTGGCTCGGGGGAACTGCAGTCCCCGTAGCCAAGACGTGACTGCAGGGTTTGAGTGGACTTTGCCGAGGGAACATTGCAACTGGCAGACTCCCGGAGTCGTGCTGACGGGAACTCTTTGTCATTCAACCTGTGGCTGCGGAACGTCCGCCGCAGCGCCCTCACTCTGGGACTTTAAGGCGGCCCTGAGGTGAGGAGTCTGAAGCATAGCATTACACTCGATACTTGGATTTGAACTGCATTTTGGAATTTATCAACATTTACAATGCCACCAGCAGTTGGAGGTCCAGTTGGATACACCCCCCCAGATGGAGGCTGGGGGTGGGCAGTGGTAATTGGAGCTTTCATTTCCATCGGCTTCTCTTATGCGTTCCCCAAATCTATTACTGTGTTCTTCAAAGAAATTGAAGGTATATTTAATGCCACCACCAGTGAAGTGTCATGGATATCTTCCATCATGTTGGCTGTCATGTATGGTGGAGGTCCTATCAGCAGTGTCCTAGTGAATAAATATGGCAGTCGTCCAGTCATGATTGTTGGTGGCATCTTGTCAGGCAGTGGCTTGATTGCTGCTTCCTTCTGTAACACTGTGCAGGAACTTTACTTTTCTGTTGGAGTCATTGGAGGTCTTGGGCTTGCCTTCAACTTAAATCCGGCTTTGACCATGATTGGCAAGTATTTCTATAAGAGACGACCGCTGGCAAATGGACTAGCCATGGCAGGCAGCCCTGTGTTCCTCTCTACCCTGGCCCCCCTCAACCAGGCTTTCTTTATGATCTACGGCTGGAGAGGAAGCTTCCTAATTCTCGGGGGCTTACTATTAAACTGCTGTGTGGCTGGAGCTCTGATGAGACCAATAGGGCCCAAACCAACCACTGCAGAGAAAGAGAAGTCTAAAGGATCCCTTCAGGAAGCTGGAAAATATGAGACGAAAAAGGGGGCAAGTGATGCAAATACAGATCTCATTGGAGGAAACCCCAAAGAAGAGAAAAAATCAATCTTCCAAACACTTAATACATTCCTGGACTTAAGTCTGTTCAAGCACAGAGGCTTTTTGCTTTACCTGTCTGGAAATGTGCTCATGTTTTTTGGACTATTTACACCATTGGTCTTTCTTAGCAATTATGGCAAGAGTAAGCATTACTCTAGTGAGAAGGCTGCCTTCCTTCTTTCCATTCTGGCTTTTGTTGACATGGTAGCCAGACCTTCTATGGGACTTGTAGCCAACACAAAGTGGGTAAGACCTCGAGTTCAGTATTTTTTTGCCGCGTCTATTATTGCAAATGGACTGTGTCATCTGGCAGCACCTTTATCCTCTACCTATATAGAGCTCTGTATCTACGCGGGATTCTTTGGATTTGCTTTTGGGTGGCTCAGCTCAGTACTGTTTGAAACGCTGATGGACCTTGTGGGACCCCAGAGATTCTCCAGTGCTGTGGGATTGGTGACCATTGTGGAGTGCTGTCCTGTCCTCCTGGGACCACCAGTTTTAGGTCGTCTCAATGACATATATGGAGACTACAAATACACATACTGGGCATGTGGCATAATCCTTATTGTCGCAGGCATCTATCTTTTCATTGGCATGGGCATCAATTACCGACTTCTTGAAAAAGAACAGAAAGCTGAGAAGCAGCAGAAAAAGGAAAGTAAAGATGAGGAGACCAATGTAGATGTTGCTGAGAAGCCAAAAGAAGTCATCGATGCAGCAGAATCTCCAGAACATAAAGCCACAGAAGAAGACCCCAAAGAGGCGGAGAGTCCAGTTTGAACCTGTGGGACTGAAGGGTAAATGGTGCAGCTCATGACCCAAAATATTCTATTGGCCTGTGATCTACCAGTGGTGCTCAGTGCAAATACTGGACATTTCTGTGGGAATCATACCAGGGGTTTATTGATGGAATTTTTGTTTCACTCCTTACCAGTAGCCTGGATTAAAAATGCCTAGCCTTGGGAAGGGAGTGGTTGAAAATGAATGAGAAAAGGAAGTCAGTTTGTGTGTTTGTTTGTTTGTTTAAATCTTTGCTTTTAACAGTGTCATGAAGATTATAATACGTGCCTTAAGTTTTAGTCTTTAGGGAGCCTTAACTATTAAAACTATTCTGCTTAACTCATCCATTTTCAGTGTTCCGTTACAAATAAAAATAACTGCTTTGAGGCAAATCTAAAATTTTAAATTAATTTTGTTTCATATTATCACTAGAAGATTTGAAAGTTGGTGGTTTTATAAAACCCTGACTAAAATATTTTCCTAGCATCAGTAGTTGCTTGGCATATGTGCCTGCTAGATATGTATTTAGGAAATTTAAGGCATGAAACTTTGAAAACATCTTGGCTTTTCTGGATGCATTGTACTTACTCATCATCAACCCTCCAGTGTCTTTTCTTGGGTTGCTTATTAGAAGTCAAGTGCTTGAGAGTTGATTTCATTAAATTACTATTTTTCTTCCCCTTTCCAAAGATACATTTTGCGTAGTCATAGATAATTGCCCTTTTTGAGATTACATTCTATTTTTTTCAATGTAAAAATTAGTATTAAAATACACAACTATGTATTCGTGCCTCCTCACTAAATTAAATGTAGAAAGCTATTTCATACAGCAGCTGAATTCAGCTTAAACTTTTCCAAAACTTCAGTTAAACTGTGAGACTTGGAATCTTTTTTTGTTGCTGTTTTCCTGGAATTTTACGCCTTTGATTCCCAGTGGTTTCATTTATATCCATATCTAGCTTAGCACTGAGTGTGAGATACTCAGTCTGTGTAGTGTTTGCTAATTAAAGAGAACCATAGAAATTTGGCCCACAGAAACCAATAGGGATAAGATTGGGAGAGAAGTTGCTATTTTGGCTTATCAATAAATAACTCCTTTTCTTTTTCTGATAAGGCCTTAAAGGAAATTATGTTTTGCTTAGAATTATTGGGCATATTCTTATTCTTCACACAACCCTAAAGATTTTGTGACCCTTTTTCACTTTATCTGAAATGTAAAGAAATGGGTTTAGTATACAGATAGGGAGGGGGACAGACCAGAATGAAAACTGTAAATTTTTTTTAACCTAGTATCTTTTAAATTACAGCAGGAAGATAATGTTAGACATTCAATGAATTATATTCAATGCATTTTAAAATATTGCTGTTGACAGTGTGAAAGTATAGACATAAAACCTTATTTAACAGGCTGGCTTTTTAAAATAAAAATTTTCTTTCTTTTTTTTTTTAAGAAATGTTTCTTCTTCCAAATGTTTATTTTCTTGAGGAAAATATTGTCTGTCTTCATTTTCTTTATCAAGATTCAATCTGGCCCTTGCTAATGTTAAAAATTCAGCACATGTGCATTGGAATTTGTGTATATGGCTTATTTTGATTTTTCTCCTTAACCTCTTCTTCCAGGCAAGCAGGAGAGAAATTTTTTAAAACTACTTCTCTGAAAGCGTTTTGAAAGCAGAGCAGTTAATTTTAAGGACACAATGAAAACTCCCTTTCTGTGCTCAGGTATCATGGCAGATGGAGGAGGAATTTTAGGGGAGAAGCCTGCTGTGATTGTTGACAGGCTTGGCTCCAGTTTGGACTCCGCCATTTTCCACCGACCTAACCTCTGTATGCCTCTTTCCCTTTCTAAAAAGTGAGGATCACCCTAAGTAAAAAATGTGGGGTGGGGGAGTAAACCAGGAGTATAAGATTATTTTCCCCCATCCCAGTTGTTAAGCTGCATCTATACATAAGACCCTGCTTAGTATTTTTCCACTACCTGAAACTTGTTAGTGAAGTGATGAAATTTTGGTGCAGAATGATCACCATTTATTAGGAGGAAGGGTTCTCAAGTTGCTGTATTCAGAAGCAAAAGGTTAAAAACTGGCTCAAAGCTGGACTAAACAAAACCTTTTACCACCCAATCCAACTCTGACTTTTTCCCCGCTGAAGACACAGGCTTAAGGGATTTATTCAGGATCAGTTTTGGTAACAGAGCCAACACTAAAGCCCAATATAGGCCTGCTCTGCCATCTAGTCCTTGCTAACAATCAGCTAATCCTCTCGTGCTGCAGTGCTGTTTTCAACACCGGACGCATCTGAGCTTTCTGACTGGGCAGTCTTGTCCCTTGCTCCATGTAAGGACTGACTAGACTTCTTAAGTTTTATTTCACTTGACAGAGTTTCAGTGGCTGCTTTGGGAAAATAGAGTGCCTGCCTATCCTTGCTTCCCTCTGTCCCACATTCTGTTAAGTCACAAAACATATAGCTGTCTAGATTGTTGTGCCCAAAGAGGCGTGGGACTGGTCAAGAGTATGCTCTGAAATAGTCTCAATTCAAAGCTGAAAAATTGTTTAAGAAACTGGTAGACTGGACAGTTGCAGATGATCATGGCAACAAGACCATATTATCACATTATATAGTCATTTTTTGAGAACGGAAATCATCTTAACCTATTCAAAATAATTTCTACAAAAGTATTCAGAAAAGGATGATGCTAAAACAAACTATAGAAAATTCAGGGAGGTATTTTTATCCCTGATTTAATCATACTAATGAATAATCTTATTCTTGTTTTATTATATTGAATTTCAGATTGATAAATTCAGAATTGGTTTATATGAAAAACCTCAATGTCCAAGTTTTACATCTTCCCTAGGAAATGGTTCATAGTATAATACATTTAATTATCAGGCGTGCATCACCCGCCCTCTTGTCGTTGGAAAGATGAGGAAAGGTGAACAGTGTATGTCCACCTTTGCAACACAGCTTGTTTTAATAATCAGATCAGGTACTTGAAGAAAGAGATTAATGACAGACTTCGGCTGCTATGAAAACTTGTAAGGAAGTGATGGCCCAAGCTTGCCTGGCTTGCCCAAATGTGAGCAATTAAGCCAAGTTGCTTCAGATTAGAAGCATCTAAGGCGGTTTCACGGAGAAGGCAATGGCACCCCATTCCAGTACTCTTGCCTGGAAGATCCCATGGACAGAGGGGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAGGAGTCGGACACGACTGAGCTTTTGACTTCACTTTCACGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTTGATGGGGTTGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAGCAAGGCGGTTTCAAATACATCATTCCTGAAATGTGTTTTAGCTTTAGGATTTCAGATTCAGTCATCCTTTCCCCACTTAGTCTGGGCCGTTGTGACAGTCATTCAGTAGAATATCTCTTCTTGGCTATACAGCACTGATTTACTTTTTGCTGGCTTTTTACCATGACTTGCTAGAAGACACTGGAATAGCTAGTAAAGAAATCACAGCCTATTGGTTGTTTAACAGTATAGACTGCCAGGGTTCAAACAAAGGCTTTGTGACCTCAAACCTAAGCATCAGGTGTTTTCTTCTGTAAAGGTGTTAATAATTAATGCCATTTGTTGCCCCAGGGCTGTCATGAAGTTTAGTTGATACGTGACAGCTTGTACTAGGCAAGGGCTTAATAAGTGTAAGCACCTATTTAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATCAAAGATATGTAGTACTTGGGGAAAAATTGAGCTCTTCTAATTCCCAAGGTGGGTGGAGCCTCACAGAGGGTAGTTTGGGAGTGACTCTTAAAGGTAAGACTCTTAGCTAAATGATCAAACTCCTTTCAGACCTATCCTCCTTTTACTCTTAGAAATGTAATGGTTCCTGTTTGGTAATGAATGAAAACTAACACCGCCTGAGAGGGGTGCTCTTTAAGTAGGTAGGTTTGAATCCCAAAGCCCTTGGTCTTTGTACACTGCCCCTACAAGGAAGAGGCACCTGATTAGTAACTGATAATCCTTTTCCTTCAATATTTGTGTTGATTCTAAAAAGAGCAGAAATATAATAAGCAGCCACTCATGATTGAAGTCCTCTCTACCTAGTTCTTAAATGTAAATGTTCTTAATGTAAACTGAAAGACTGATGAGCTTTGAATTTTTCCCTACTACATTGATAACATTTAAATCATAAATTGTCATCAGTTGGTGGCTGAATAAATTGGTACAACATATTGGCAAAGTTTTGCTGCTTTTATTGACTACGCAAAAGCCTTTGACTGTGTGGATCACAACAAACTGGAAAATTCTTAAAGAGATGAGAATAGCAGACCACCTGACCTGCCTCCTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGTTAGAACAGGATATGGAAAAATTGACTGGTTTCAAATTGAGAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGGGTATGTCATGCGAAATGCCGAGCTGGAAGAAGCACAAGCTGGAACCAAGATTGCCGGAAGAAATATCAATAACCTCAGATATGCAGATGACACCACCGTTATGGCAGAAAGCAAAGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGCTGGCTTAAAACTCAACATTCAGAAAACTAAGATCATGGCATCCGGTCCCATCACTTCATGGCAAATAGCTGGGGAAACAATGGAAACAGTGACAGACTTTATTTCCTTGAGCTCTAAAATCACTGCAGGTAGTGACTGCAGCCATGAAATTAAAAGACGATTGCTCTTTGGAAGGAAAACCATGACAAACCTAGACAGCATGTTAAAGAAAGCTGAGCGCTGAAGAAATGATGCTTTTGAACTGTGGTGTGGGAGAAGAGTCTTGATAGTTCCCTGGACTGCAAGACCAAACCAGTCCCTCCTAAAGGAAATCAGTCCTGATTTCCTGGAAAGACTGATGCTGAAGCTGAAACTCCAGTACTTTGGCCACCTGATGCGAAGAACTGACTTATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTGGGAAGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCATCACCAACTCGATGGACATGAGTTTGAGCAAACTCCAGGAGTTGGTGATGGACAAGGAAACCCGGTGTGCTGCGGTCCATAGGGCTGCAGAGTCGGACACGACTGAGCGACTTAACTGAACTACTAGTTCCCAAGCATTGTTCTAAGTTTTGAGAATCCAGCCATGAACATAATAATGTCTTCACATGCATGCATCCTACCTACTTTGTAGTAAGGGAAAGCAGACAGTGAAGAGTAAGTTATAAGGAAAACAGGAATATGGATATAAGATAAAACT EMBV3_30746 TTCCAGCTCCCCTGCAGATTGTAGCCAGCACCCGGATTTTCAAGGGGTAAAAGTTATTTG Gene GeneID:100297399|LOC100297399:XM_002694334:51_cdna Constitutive 0 NULL GeneID:100297399 17 GENE LOC100297399 NULL hypothetical protein LOC100297399 EMBV3_27980 CTTCAGAGCCCCTTCCTGAGAAGATCCCAGGCCACGGCCAGGCTCGACGCTCCTGGTGCT Variant GeneID:510596|CHMP6:NM_001075457:72_cdna 575^902 3 EMBV3_28568 GeneID:510596 19 GENE CHMP6 MGC139458 chromatin modifying protein 6 EMBV3_01264 TGATTAGAAATGCAAAAGCCGTGGTGATTTCCAGATGGTGCTTCCGCCCCAGCTCCACCA Gene BVT0102_271530 - 0 NULL GK000016.2:63568103-63581734 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069910 TCONS_00067950 2 XLOC_042084 XLOC_041563 Coding TCONS_00069910 XLOC_042084 Coding Coding STX6 16:63577172-63628953 = TSS52024 7129 1 TCONS_00069910_2 255 0.0238462617477907 8 0.862475859405176 0.00205776734765245 0.00225439846413107 0.00204998655966379 0.00135332434680561 0.00176352478778955 0.000581181399084216 0.00123116966284143 0.000979475208741847 0.00180760976915184 5.00395438888617e-05 2.65904041708052e-05 4.03932203532825e-05 0.000245919043702905 0.00033823295306669 0.000266267293742673 0.00133549470903326 9.28879242029774e-11 0.000308599427071602 0.00151051713639307 0.00202673092582602 0.000443781116739814 0.000122731634982094 0.000599805631767344 0.000206003445414836 0.00219410429031953 0.00139598300766543 0.000963654672202147 2.23571809962385e-07 1.06238528644931e-07 0.000175796008303473 NM_001082431.1 STX6 Bos taurus syntaxin 6 (STX6), mRNA. 0.0 4486 99.80 0.350540047692524 NM_005819.4 STX6 Homo sapiens syntaxin 6 (STX6), mRNA. 0.0 2489 73.00 0.620143077570487 TCONS_00069910_2 sp|O43752|STX6_HUMAN STX6_HUMAN Syntaxin-6; 1e-171 478 97.91 0.933333333333333 2 coding 0 0 0 0 -0.31505065522861 0.109172029100443 0.0247860030653266 0.617759582614625 CGGCCGGACGCTCCGGGAGGAGTCGGGGGAGGGGACAGCCGCGGGGCCGGCTTCGGAGTCTGGATTTGGTCTGCAGTGCCCATCGAGTGCTGGACCAGCGGCTGGCCGGTGCACCCCGCCCTGCGCGCGCAGAGGCTTCGGGACCCCCAGGCCGAGGCGCGGGCCGCTACGAGAGGCGGGTAGGGTGGGCAGAGGGAAATTTGGAGGGCGCGGGCGCCCTGTGCGCGGAGCAAACGTGAGGCGGCCGGGGGCCGGGACGCCATGTCCATGGAGGACCCCTTCTTTGTGGTGAAAGGAGAGGTTCAGAAAGCAGTCAACACTGCACAGGGATTGTTTCAGAGATGGACAGAGCTCCTCCAGGACCCATCCACAGCCACGAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAACCTCCGGAGCATAGAGTGGGACCTAGAGGACCTCGACGAAACCATCAGCATAGTTGAAGCAAATCCTAGGAAATTCAACCTTGATGCAACCGAATTGAGTATAAGAAAAGCCTTCATCACAAGTACTCGGCAGGTTGTCAGGGACATGAAAGATCAGATGTCAGCTTCATCTGTGCAGGCGTTAGCTGAGAGGAAAAATAGACAGGCCCTGCTAGGAGACAGTGGTGGACAGAACTGGAGCAGTGGAACAACGGATAAATACGGGCGCCTCGACAGGGAGCTTCAGTTGGCCAACTCCCATTTCATCGAGGAGCAGCAGGCACAGCAGCAGCTGATCGTGGAACAGCAGGATGAGCAGTTGGAGCTGGTCTCTGGCAGCATCGGAGTGCTGAAGAACATGTCCCAGCGCATCGGAGGGGAGCTGGAGGAGCAGGCCGTCATGCTGGACGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAATGTGATGAAGAAACTTGCAAAAGTATCGCACATGACCAGTGATCGGCGCCAGTGGTGTGCCATCGCAGTCCTCTTCGTGGTCCTGCTCATCGTGCTGATCCTCTTCTTAGTGCTGTGACAGCGGGGCCCCGGCTCGCTTCCTGCTGCACACACACCCCGGGGGACAGGGAGAAGCAGCGCGCGGCGGCCCGCTCCTCGCGACCCTCTCCTGGAAGCACAGCCTGAGCTGACTTTTCTTTCCGTGACCCCACTGTGGAGACAGCGCCTCCAGCCCAGTGTGGGGAGGGCCGGTGGGCAGAGGAAGTCGAGGACTGCACGCTCCCGGCTCCCCGGCTCCCATTCTGAGGACAGCTGGCTCTGCTTTGCCTCCCCCGGAATTCACTCCCCCCGGAACTTGCTCCCCCTGGAGGGCCTTCGAGGAATCCAGAAAACTTCGCAGACTCGGCTCATGTTGGCTGACGCTTATTCCATCCATCTTTGGCAGCTCTTTTCTCGCGTTCAGACTCTTCGCCCCTCAGACGGCTCGCGCTGGCCACTGCAGAAACACCTATGGGGGGTGTGGGTGCCTGGATAGGTCTCGCACCCTGTCGAGGCAGTGCTGTCTCACCCCAGAGAGCTGGTGGTTAGTGGGGACAGAGAGCTCAGAGCACTTTGTGACAGAAGATGCAGTGGTTGGTTTGCAGGGGTAAGTGCTGGGGTGAAAGTGCTTCTCTAGGCGCTGTTTTTGTGGTAGGAATAACCAGTGGAAAAGAGCGACAAGCACTGGGCTTTGCGGCTGCTGGCGACTTGTGGCTTGAATTAAAGGGAGGACGGAGCAGCAGGGCACAGCTGCGGAGGGCGGGTGAGGTCGCCGGGGTCAGGCCCTTGCTGGATTCATGCCACTGTCATACAGCCACCTCCCCAGAGGGGCAACTTGCATTCCTAGGGGACCCTGAAATGAGCGGCTCAGCGGCTCACGTGAGCGGCCTGAGGTCCCAGGATGGCGTCCGCGGCAGTTCTTTTATTCCAGCAGCACTCCGCCTTGAGGGCTGGGAGTGGTCAGTACATTAATGACACTTACCAGAAACCATAATGTCAAAAAAGGCTAGTTCTGGACCAGATTTTTCTTACCCTGTAATTGCAAGGATGGGTAGGTGAACATGGTTCCTTTTTCCCTGAGACGATGTGGTTTATCATCCATTCAAATAACTGAGCCCTTCCGGATTTAAATGACAGATGCTTTCATTGGGTTTTAGTTGCTGACCCTGCTGAGACACTATACACTCCAAGCTTCTGGTGACTTTTAAAATGCCTCCAGTGTACATGTGTATATATTTTTATAACTTCCCTGATGAAAACCTAGGATTGAAGTAGCAGCTGAGCCCAGAGCCAGCGTGTGGCCGTGGCAGCTGCCGGTCCCTCCCCACCATCTCTCTCTGCACTTGTGAAGCAGCATCTGGGCAGAATTCTGGCTTCGACTCCCGTCTCCTCATCTTTCGGGGTCCATTCCTCAGCACACTAACTTTTTTTTCCCCCTTGTTTTGTTTGTATCTTGTTTTTTTGTTTGTGTCGAGCTTCTGTTTTCCCTTTTTGGTGTGTGTGATTTGCAATGATGTACTTGCCCAGCTAACTCTTGAATTGCACTTTGGAATAAATTCTCATAACAATTTTTTTAAAGAAGGGTATTTTCTCATGTTTAGGATCATGGTAGGTCAGGAAATCTGCCTGTGGATGAAAAGCTGAAAGCAGGTTTATAGAATTAAAAGGGTGGTTGACATCCACGTTTACACTCCACTCTACTTGATATGTAAGTTATTTCTTTTCAAATTAGGGAAAAAAGTGATTTTTACAAATGGCTTCAGATATAGGGTACTAGATTACTTTTCCAAGTTTTGAGCTTGTTAAAATAGTCTCCTACAAGCCAAAGACACAGCTGGTCCTTAAAATGTCTTTGTTAAACATCCATGTGGACCTTGTCTCAGTACTGTGATTCCCCACCTTCCGTGTTACACAAAGCAACCCCTTCTTGATGAATTACACGATTGCCCTGTTTAAATGCCATACTGTTCTCCAGGTGTTACCAGATTGACCATGTCCTTCGAAACTGACATCATGTCTGCAGGGCCTGTTGGGAACACGCTGGTCATTAGTAAGATTCTCCCCAGGCTTCAGGGACCAAGTTTTGTGATACCGAGGCTTAACTACTAACTGTTTGGGGATATTAAGAGTTGGCAAACTTGCTCATTTAAGGTGTTTGCTAGACTGTGGCTGTTGCAGACCAGACTGAAGAGGAAAATATTTAGAAAGTTTACTTAAAATCCGGGCAGTGCAGCATTCTCCCTGTCTTTCTGACCTTGGAGGAGCTGTTCTCTGATAGGCCACCTCTTAATGTGTTTGTCGGACACACAGCCCCAGGTGACCTGATCCTGGGTCTGACCCTGGCTGTTATATATCAGGACTGGGCAGTCACTGCAGACCAATGTTCATTTGAAGGCTCCCCAGTGAAATTCCAGACTGTGGCAGACAGAGCATGCCAGGGGCTTAGATTCATTTCTAAGGATAAATGTTTCCTCATCAGTGACCTAATGCTGTGAGTTCCTTGCAGTGGTCCGCTGACCCTGAGTGGCAGAATGGGGGTGGAGCAGATGCCCACAATACCTCCATGAGGCTCAAAGGCACTTCCAGTAGCCATGGGGCCTTTCCCCTCCTCAGCATGTACTTCATCCGTACTCATCATTGCTAAAAAAGCTGGCAGGATATGATGGATAACAGAAAGAGCTCAATTTCTGTTTATTGGAAGAACATTTTACTGATCAATTGGTTGGGCAGGGTGGGTAGAATGGGGGAGTGATCCACTGAAAGAATTTGCCAGAGCAGGAATCCAGCTGGGAAACCAAAACACCTTTACTTCCTTGTCCTGGTTTTTGATCTTGTCTTTGTGTGAACTGTGAAAAATCACAAACGCGCTCTGTATGCTGCTACTGCGTGGCAATTGGATGTCACAGCATGTGTGTTACATGAGGCTCTTCACGCCAGAGCTGGGGGAGAAGCTTGGTAACTTGCCCATTATTCTCTGCTTTTAGCCAGAGTTAGACAGACTGATGGGTCTGGTAGCCAACGACTTGGCAACTTCCACTCCTTCTCACCTCGTGAGATTAAGGGCTGCGAAGAGAAACGCAGCCTTAACTCCAGCAGAAATCTGTCTCTCTGAAGCGTTTTACCTTCTGTAAGTGAAAGTGGCGGAGCCAAGATTTTTCTTTTGGTTATTTCCCTGGCTGTCAAGTGAGACCATTACCACCTTTCTCGAGAATTCATAGCATCCGAAGATCTAAAACCAACTGATAAATACGAGTTGCTTTTCCACGCTGGAATTTGAACCATTTGGTGTTACCTTGTACACAGGACAAATTTGTAAACAAAATTCGGACTGTCTAGAAAGCTAAAGTTCTAAAATATGGAACACAGTACTGCCAGTGCTTCCTCTTTGTCTTCCTCTCACTGGCATTTCTCCCCCTTCCAGGTTTTTTTAAGGAAAAAAAAAATTTTTTTTTAAGACTGTTCTTTGTCTATCAAGTGCAGAGAGAGGGTGAAGCCACAAGGCCCGTAGTCAGGCAGCCCCGTGCCTGAGCACAGTGCGTGAGTATGGGGCCCAGGGTAGGACCCTGCAGCCTCCCCCTCCCAGCCTTTACGTCTCTGGGGCAACAGGGGGTGGGCACTCCCGGCAGGAGGAGGTAGCCTTTCTGCCCCATCTGGTTACCTGTACCCAGCTCCCAGCCTGTGCTGAAACCAAGGAGCTCCTTTGGTCTGCCTGATAATGCTCCCAGGGAGACTGCTGACTGCTATCGGCTGTTGAGTCCAGAAACCCAGGAAAGTTCTGAGTCGAGAGAACAGCCTTCAGAACAGCCCTGCTGTGAACCTGGAGGCCAAAGCTCCAAGCTAGCCGACTTCTGGGATGTTAGCATCCTTAACAGTAGACTCAGGACTTTGTCACTTAGCTCAGCCCTCATGTTTGGAGAGAGGACACACTTTCAGCTCCCTCAACAGACACAGGAGTCACTGGGTGGGTTGCAGTCCAGACTTGGCACAGGGAGCCCACCCACTGTCTGGGACAGGCTGACCTCAGTGATGGGACGTAGGCTTGTAGTGACCTGTGCTCCCCACTGAGCTCAGCCACTTGACATCTTTTGCTTTTGGGTGAACACGAGGCTCTGAATGTTACAGTGGCACTCTGGTCGTGTTGCTGTGATGTCCGTGGGTGGCAAGTTCTTTGTTAGGTGATATTACCGTCTCTTTACTAGGACAGACACTTGGGGAGGTGAGAAAAAAAGGACAAGAACTTGGCTTCCCTCTGATACAAGCTAACGTGTTGGTGCCGTTTTCCTTCGCATGTGACCTGTGTCCAGAAATGCCCTTCCCCGAGGCCGTGCGGGGAACTGTGCTTAGACAGCATCCAGGCGCCTGCCCTGCTGCTTGGGCTTCACACGAACATTTCATGGTCCTGACCCTTTGTGACAAAGTGTATTTTGCCTTTTTTCTTTTTTTCTTAAAAGTTACGACTTATCCAACCTGAAGCCACTTGATTATCCGGAGGGTATTAGAAACAAGACCACCCAGCTTCGTTGTCTGCTGTTGTCGCAGGCTTGTTCCCTGGCGGCAGCCCAGCGCCCTGCTCCAGCCCAGCTTTCTGGCAGCCCTGGGGGTGGGACCAAATTCAGGGAGGTTCTTTTCCTGCTCTGCAGAAAGTAGGTTTTGGCTGAGACTGGGCTACTGAATGGGAATTGTGACCCCACGGTTGGTCGGTTCCGGGACAGGCAGCTGTCCTAATCCTCAGGAAAACAGTGTGAGTGTACCCTGTTGTCTGTGCGGGGTGAGGGGAGGCCAGGCAGGTGTCCCACTAATAAGGCACTGGAACTGCTTGCGAGCATCACGTGATGACGTCCTGACTGACCCGGGCTGGGAGGCCGCCCAGGGCTGGGGGCGGCCTGGCAACCAGGAGAGGGCCAAAGCAAGCAAGCTGTAAATGATGATGGATTCGGGTTTTGTAAGTGGAAATATGCTTCCACTGGCTCACTTGTAATCAGAAATTAGTGTAATTAAAAGTTGTGTAATACATGGCAATGCTCAGCAGGACTAAACCGTTGTTTTTTTTTTTTCTTTAAAGGATAAATAACCTTAAAGCATTTTATTTTTAATTAGCTAGAGGTACAAATGAAAGAAGTGAGATCAGTGATTAGAAATGCAAAAGCCGTGGTGATTTCCAGATGGTGCTTCCGCCCCAGCTCCACCACCCCAGGAGAACAGTGTCAGAGCCCGGGGCCAGCAGTTCCAGCCTCGCTGTAGGTAGATCTCGCTTCCTCTACGCAGTAGCTCAGCAAGTGTGGAGTGGGACCGGCGGGTTGCGTCCCCTGGGGACTTGCTTGAAATGCAGATTCTTGGGCCCCACCCCAGACCCACAGACTTGGATGGGGCCAGTGGGCTGTTCATCAAGCCCTCCAGGGGATTCTGATGCCCACCCAAGTGTGAGAACCACTGCTCCCTGCATTGTGGAATTTAGGCTGCAGTAAACCACCGCTGCTGTAAAATAAAACAGCTTCATGGCCTTGATTCTAATCCTGACCTTAAAATTTGATGACACAATAAACTTGAAAACTTTTGAAAAATACTTGTGTTTAAAAAAGCCTCCACTAGCCATCCTTAAAAGTGATATTTTTACACCCAGAAGTTTATCAGTAAAGTTTCTTACTTCTACTCTTGAAGTCATGTTACAGCTGTACAAAGAATACTGTTCAGTATTAAAGAGAAATGGAGAGACCATGAACTTTGTCCTGGTTTTTGATTTGGTTGGTTTTTATTTTTAGTTCTTTTCAGACCAAAACACAGCTGCCTCTCCTCCTCCTGCTCGCACTAATAAACATGAACCTGTGCATATGGCTGGGGTAGGAAAAGTTTGTGGCTGGTGTGAGATGTGAGTTCTAAATTGTTTTCTCTGGCTGAGTAAGTTATATATGAATTCTTAAACCCCCAGCCAGTCATACTGTGCATTCATACAGCACCGTTTCAGTTGGGATGAGGCACCTGGGGGTCAGAGAGACTATAACACAAAGGAATCGAGTCCCCGACTTGCCCTTCACTAAAGTGTTGGCATACAAAAATATTGCCCATGCCAGTTGGTAGTCAGAAGAGCTTGCCTTGAGCTCTGTGGGACAAGGTCAGGCTGTGTGAGCTCATGAAGGACGGGG EMBV3_15676 AACCTCAGCTTCCGCCTCTATGACCAGTGGCGAGCCTGGATGCAAAAGTCACATAAGACC Gene GeneID:511086|CRLF1:XM_002688536:136_cdna Constitutive 0 NULL GeneID:511086 7 GENE CRLF1 NULL cytokine receptor-like factor 1 EMBV3_06220 ATCAACGACCTGTGGAAAGATGCCTTTTACGTTACCAGGACCACAGGGCCCAGCTCTGAA Gene GeneID:512120|LOC512120:XM_002687781:38_cdna Constitutive 0 NULL GeneID:512120 5 GENE LOC512120 NULL similar to Uncharacterized protein KIAA1467 EMBV3_24923 CCAAGGTGGAGTTCGTTGAAGTAGATGTGGATGACTGTCAGGATGATGCAGCAGTGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37746 ACCTCTTCCGGGCCATAGACCAAGAGCGGAAGGGCAGGATCGCGTTTGCCGACTTCAAGA Gene GeneID:788450|LPCAT1:XM_002696464:87_cdna Constitutive 0 NULL GeneID:788450 20 GENE LPCAT1 NULL lysophosphatidylcholine acyltransferase 1 EMBV3_20508 CGTTAAAACTTTGCCACGCAAATACCGATTTCTAAACCACAATGATCTGAGTTTCTTTCT Gene GeneID:617976|LDB2:NM_001046611:19_cdna Constitutive 2 NULL GeneID:617976 6 GENE LDB2 MGC127025 LIM domain binding 2 EMBV3_19978 AACTGGGGTAGATACACTGAAACCAGAGGGGGAGGTTGTCCCTCACCCAAGTCAACTGTA Gene GeneID:517259|MICALL1:XM_002687921:130_cdna UTR3_Alt 2 NULL GeneID:517259 5 GENE MICALL1 NULL MICAL-like 1 EMBV3_02153 CCAGCTGATTACTCACAGTCTCAGTTTCTCAACGGTTGGGGGAGCCTTTAGAGAGGATGA Gene GeneID:504258|SIGLEC10:XM_002695229:50_cdna Constitutive 0 NULL GeneID:504258 18 GENE SIGLEC10 NULL sialic acid binding Ig-like lectin 10 EMBV3_18743 AAGGTGGAGAAGACCCGTCACGCCAGACAAGCAGCAAGTGAGGAAGAACTCCCAATCAAT Gene GeneID:781292|TNMD:NM_001099948:14_cdna Constitutive 0 NULL GeneID:781292 X GENE TNMD NULL tenomodulin EMBV3_25350 ACCTCACCGTGGTGCTCTCGTTCTATGGGACAGCTCTATTCAGGTATATCAGCCCCTCTT Gene GeneID:523258|LOC523258:XM_002687344:21_cdna Constitutive 0 NULL GeneID:523258 5 GENE LOC523258 NULL similar to olfactory receptor 282 EMBV3_18451 AGTGTGTTCCAGCCTTATGCTTGGTTCCTACTTGATGGCAGTTTTGGATGCCACGACCCT Gene GeneID:531225|LOC531225:XM_002699187:25_cdna Constitutive 0 NULL GeneID:531225 29 GENE LOC531225 NULL similar to olfactory receptor Olr1242 EMBV3_09880 TTCTAAATGCTGAGAGACAGCAGGGAGCAAATCTCCAGGGCTCCCACCTCCTCAAGTTCA Gene BVV0102_458907 - 1 EMBV3_28047 GK000007.2:44760149-44773997 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27479 CAAGATCACCAACATGACCTTCCAGTACAGGTCGGAGGAGCGGCCTGTGAAGAAGCGCAA Variant GeneID:614978|LOC614978:XM_002688434:61_cdna 477^752 1 EMBV3_30967 GeneID:614978 6 GENE LOC614978 NULL similar to RIKEN cDNA A930005I04 EMBV3_18845 AGGCGAATGCTTTGCCGTCTGAGCCACCAGGGAAGCCCTTTGTCTGCTACAATAATGAAA Gene GeneID:510379|MON1B:NM_001037454:23_cdna Constitutive 2 NULL GeneID:510379 18 GENE MON1B MGC126906 MON1 homolog B (yeast) EMBV3_32740 TTCCTTGAACAGCAGCGAGACCCAGACTCGGCTGATTTAAACTGCAATATTCAAGACGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00402 CTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCCCTTGCTAGTGTTAGCCATGGAG Gene BVT0101_067348 - 1 EMBV3_03278 GK000018.2:228764-351041 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251625 TCONS_00082029 TCONS_00138892 TCONS_00166748 TCONS_00133817 TCONS_00253007 TCONS_00004182 TCONS_00082022 TCONS_00004173 TCONS_00251677 TCONS_00007850 TCONS_00196789 TCONS_00132066 11 XLOC_154566 XLOC_050894 XLOC_084763 XLOC_101584 XLOC_081223 XLOC_155948 XLOC_000983 XLOC_154618 XLOC_003410 XLOC_118454 XLOC_080699 Coding TCONS_00132066 XLOC_080699 Coding Coding - 23:7093311-7102105 - TSS98892 8794 7 TCONS_00132066_11 123 0.945189902206049 1 0 7.13727735132828e-06 2.9873255891193e-06 7.50325315329213e-06 1.46268561336438e-06 2.99085920319495e-06 1.24044425683342e-06 1.71032856545689e-06 2.19236920256603e-06 4.79343649727863e-06 0.000767795012496309 0.000368711369605416 0.000336024836249411 0.000103000976284977 0.000409937210419543 7.39255047263018e-05 0.000476616862090315 0.000612597109439181 0.0013304767496547 5.64730400017029e-06 2.21144063662903e-06 5.06072244393771e-07 0.000433971474245166 0.000500985691697242 0.000853409813723909 3.12131618058053e-06 2.80362095478888e-06 2.43726306322051e-06 0.000466169177175499 0.000330046515576611 0.000716729729457703 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1256 89.60 0.106095064816921 TCONS_00132066_11 sp|Q8N8A4|GAH6_HUMAN GAH6_HUMAN HERV-H_22q11.2 provirus ancestral Gag polyprotein; 5e-13 64.7 29.91 0.861788617886179 0 coding 1 1 1 1 1.55657144251834 0.000204121725010461 0.00720252653094945 0.932219370990892 GCTCCCCCATATCCTAGTGGTCCCCAAAATATCAGACCCTGGTGGGAACTGACAAAAAGACAGGGAAGGGCAAACTCATGAATAGTTATGTATCTCAAAGAACAATCCAAAAACTGATCAGACAGCCAGCAAAATAGTCATGGTGATTATCTCTGGGACACGAAACAGTGCATAATTTTACTTTTCTCCTTCTCCTTTAGATTCTTTTCTCTTTTCTCCTTTAGACTGTCTCTATTGTCTAAATTTACTGTTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATAAAAGGAGGAGCCAAAGCGCTTTCTCTCGGACTCTCTCTCCCGCGTGCATGCGCGCTCTCTCTCTGTCTTTCTCTCTCTCTTTTTCTCCCTCCCCACACACTTCTCCACTCTCTTCTCTTCAAGTCTTGGATTCTCCTCCTATCTTATAAGTAAAATAGAGCTGTAACACTGATTTGCCTAAGAGCTGTAGCACGGTTTGTCCAAGACCTGAGAGCTGTGACGCGCCGAGGGCTTTAAAGTCCGTTGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACATTTACTATACAAATGTATGCTATTTATGTAAGAAAAAAATAGTTTTAAATATCTTCAAGATGCCACAATACAATACTCAGCACCAGGCAAAGCTCTGTTCGTCAAGTAACTGAGAGAGTCATTTCCTAGGCAGGTTGATAAGGAGTCTAGGGGTTCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTTTTTCTTTCTCCACATTCCTTAGGATTAAATAACAATAATGTATCCTGCCTAAGGACAGTCTCTGGATTAAGGACGGTCTCTGGTTTAAACCTTCTGTTATCTTAAAATGTAAATTATGGGAGTAGGTCTGACAAGGTCTTTATAACCTCCAGACATTCTTTGGATTATATAACTTCATTGTTATCACTAGCAAGTGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGACCCCGGATTGAATTCTCCGGGGGCCAAGAATCCCGGTGTCTTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCCGGGATCCTTCAGGACAAGGTAAGGCTGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCAAACACGTTTTCTGCTGTGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGACAGGCTCTGCATGAAGCAAGTAAGGAGCCCTGCTCTGCGGTTCCACGGTGATCTCATATGGCTTATGGCAGAAACCTGTCGGGGCATTATACCGACCTGCCAGTGCCAAGAGGCACCCAATGTCTCCTTCGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACCCTCCTTTCTCAGTCAAACTTTTCAGTCCCTTTGACCATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATTGGATATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTATACTGTGGCTTAGGTCCAAAACTTGGATTGGTAGTCAAGAAAGCGCCTAGCCTCGCTAGGAATCGAAAGTTTGGAAGCTAGATGGAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTTTTCTTTGGTAACGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTGTTGGGGGCCAGAGTGAGGCACTCCGCCGGTGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATTGAGCCTCAGGAGTCCCCCTGGAAATCCTCGAGCATCAACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTCGGAGAAGGAGTTAACTTAGAGCTCCAGTTAATAAAAACTCCTGGGTGTGACAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGACAGGCTTGTCCAGCCACATGTGATTGCTCACAGCCTCCCAACTGTGAGAGGCACGAGATGCTTTAAACCTTCTAAAAACAGGTTCCTTAGAAAAGTTAGAAAACTGTTAGTATAAGTATAATGGGTTGATTAAAAATTGTATTGGTTAATTGTATTGGCTCAAACATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTATACACATTAATGAATATATAGAAGAAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAACTAAAACCCACTATACCCTCACCCTATAGGAATGTAACTTTATTTGGGTGGCATCTGTTTTAAGAATAATCACCCCTGGAGAAATAAGTGTCCTGGTTGACTGACCGCTGTCACAAGGAGAGGGTCATAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGCCCTCTGTATACATTTGTATGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCTGTGTGACTTTTGCCTAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTCCTCCAAATACTGGTCTCCCCATGTCTCTCTCTCTCTCAAACTCTGGCTGAGTCTCCATCTGGACCACGGAACCCACCAAGCTTACTAATTTTGCCTGGGCTTCTAAGATCTGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTTGGGAGAACAGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACCGAGCTATCCTTATTCTATTACTCTTTACATCTTTAATTAATATCTAATTGAAGCTATTGTATCCTGATCCTCGCCGATGCTGTCCCCGCTTCGAATACCCTGGATCAGCCGGGGCTGGACCCCGGCACAGTTTTATATTCGCGTCGGTCTTGTTGTAGTCAGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCCCTAGTAGTCTTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAAGGTGAAGAGCTGGACGTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAATCGGGAGGGATGCAGACTGCGCCTGCGCCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACGTCTGTAACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGCGCTGGTCGCTTTTTTTCTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGGCGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAACCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCATACCTAGGACTCCAAGTTGAGCAAACTGAAAGCCAGAGAACCCCCCTCAGAAGGGCTGCCTTGGTCTCAAACTGCCCACGTGGAGGTCCAAACAACTCCTGTCTCAGTACGACCTCAGACTACTCCGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAAGAACAGGTTTCTCCAATCTATCCCTGGGATTATATGCACAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTTGCCTCTTTATGAAACACCCACTGGGAGAAATAATCAGTCTGTGAGAGTTAATAAGCCTTTCTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGTTTTATGACCTCACTTGGAAGGATGTGATGTATATCTTGAGACAAACGCTGACTCCCGAGTCAAAGACTCGAATTTTGGGAAAAGCGGTTGCTTATGGAGATGAATGACTTGGTAATGCATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCAGTCCCAACTATAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACCTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGGAGGGGAAGGAAGCTCCTGGTAAATTCCTAGATAGACTGAGAGAAGGCCTTCACAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATAGCTGATGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGATAGGGAATATGAGCAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCACCATGGCTATGAAAAATGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATTTAAGCTGCCCCCGGCTCCATGTCCGGTCTGCAAGAGACCACCCTGGAAGAGAGACTGCCCCCAGAGGCATAGGTCTCCAGGGTCGGACTCTCAAGACAATCAGGACTGAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAGCCCCGGGTATCAATAATTGTGGGGGGCCAATACGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTGCTTACTGAAGCCCCTGGCCCACTTTCTTCCTGATCCGCTTCAGTAATGGGGACTGTCTGGACGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTATTTTCACACGAGTTTCTGATCGTGCCAGAATCTCCCTCACCCCTTTTGGGAAGGGATATACTGAACAAGGTCCATGCCTCTGTTTTCATGAATATGAAGCCCTTCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTTCTGTAGTTGTTAAGGTCAAAGACCCACACGTATTTCCACATAAGAAGTAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGGAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAATAAATCAAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATAAATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTCTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTTCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGGTTTGCCCCAGGGATTTCGTGACAGTCCTCACTTATTTGGACAAAGTTTGTCACAGGATCTACAAAACTTTAATAGCTCTGAAGTGGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGGCTGTGGTTACAAGGCGTCAAGAGAAAAGGCTCAGCTTTGTCAACAATTGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAAAGAATTAAACCTATACTAAATCATCCCCTACCTATGACTTTAAGACAATTGAGAGGATTTGGGGGAATCACAGGTTACTGTCGCATTTGGATTCCCGGTTATGGGGAACTTGCCCGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCGGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCGCTGAAAGGAAAGGTGTGGCACTGGGAGTTTTGACACAACCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCATGTGGATGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACCGTACTGACTTCTCATGATGTGAGTGGAATATTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAATACCAGTTATTGTTGTTAGAAGGACCAATAACTAAGCTTAAAGTTTGTGGAAATCTAAATCCTGCCACTTTCCTTCCTGAGAAGGAAAATCAAACACCTGATCACGATTGTTCTCAATTCCTAACTTTAAACTATGCAGCTCGGGAGGATCTAAAGGATACCCCACTAGACAATCCTGACATGGAAATATTTACAGATGGCAGTTCTTTTGTTCGGGATGGAAAGCGTAAAGCAGGTTACGCCGTGGTGACTGCTAAACAGGTTTTGGAAGCAAAATCTCTCCCCTAGGGAACCAGTGGTCAGTTAGCCGTGCTTGTGGCTCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCGGATGGGCCTGATAATCTATGTGAGTCTACTTCTGCTGACTCCAAAAATCCTGAGTCTGCCGTTTGAGCCTCAAGACAATGCCTTCCTGTCCTGGGCTCACTCCTACGCTGCATTCCACAATCAGTCTAACTGCTGGGTCCGTGGAGCACTCCCCTCTTCATCAGTGGAAGGCTTCTGGAGGTGGACATCTCCACTTCAAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCAACAACAGTCACATGCAATGCCTCTTCTTCATCTGATGACATCTACCAACCTTAAAATGGACTGATGCAGCACTTTGCACTTTAACTATGTACATAATGTGACTTTTAATTTCGATTTTAACTTGTTTTAATGACTGTGTTGCCTGCATCCGTAACTGTATAACTGGATTTGTTTCTAGCCGCTTGAAAGCTTTTAAGTTACAAATGGTTGCTCAAACTCCTGCTACTGCTACAGCTTCCTCCAACTACTATTTGGGGCCCCTAGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACATCCCTTGTCAGCTTGGAAGCAGTTATGGAACGAGAACAACACCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGAGAGTCATTTCCTAGGCAGGTTGATAAGGAGTCTAGGGGTTCCCAAGGGGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAACGGACAAACTTTTTTTTCTTTCTCCACATTCCTTAGGATTATATAACAATAATGTATCCTGCCTAAGGACAGTCTCTGGATTAAGGACAGTCTCTGGATTAAACCTTCTGTTATCTTAAAATGTAAATTATGGGAGTAGGTCTGACGAGGTCTTTACAACCTCCAGACATTCTTTGGATTATATAACTTCATTGTTAACACTGCTGCTGCTGCTAAGTCGCTTCAGTTGTGTCCAACTCTGTGCGACCCCATAGATGGCAGCCCACCAGGCTCTCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAATGAAGTCGCTCAGTCGTGTCTGACCTTAGCGACCCCATGGACTGCAGCCTAGCAGGCTCCTTCATCCATGGGAGTTTCCAGGCAAGAGTACCGGAGTGGGGTGCCATTGCCTTCTCCATTGTTAACACTAGCAAGCGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAATTTTATTACACAAAAGCTCTGAGCGATCAAACCTCGTCTCTGGCCCCGGATTGAGTTCTCCTCCTCCAGGGGGCCAAGAATCCCAGTGTCTTCGCGTGATTCAACAACAACCTTTCATAACTAAGGTTCCTGGATGCAGACAGATACCACGCCTCCCGTCCCCCGCCCTCCCACGGCCCCAGCAGAAGTACCCACGGTCTAAATCC TCONS_00133817 r 5' 0 TCONS_00133817 r 5' 0 EMBV3_02738 TCCTCAAGGGCATGGGCAGTGGCCTGTTGCCACCGCGGAGACCTGGGGAATGTCCGTGCC Variant GeneID:515022|CCS:NM_001046187:6_cdna 331^569 3 EMBV3_17139 GeneID:515022 29 GENE CCS MGC137566 copper chaperone for superoxide dismutase EMBV3_32519 ACCTGTGTTTTTCAGGTTCAGCCAGGCCCACCACCATGTCCAGTATTCTACCCAGAAAAG Gene GeneID:522040|MGC143117:NM_001080286:30_cdna UTR3_Alt 2 NULL GeneID:522040 19 GENE MGC143117 NULL hypothetical LOC522040 EMBV3_11986 CTGGAATAAAAACAGAGTCTGACGAAAGGAATGGGTCTGGGACTTTAACAGGGAGTCATG Gene GeneID:530205|LOC530205:NM_001083456:159_cdna UTR3_Alt 2 NULL GeneID:530205 3 GENE LOC530205 MGC137767 hypothetical protein LOC530205 EMBV3_02714 AAACAGAACCACCACCTAAGGCACCGATGGGACATACACCTCGTCCCTTTCTGATCCTGT Gene GeneID:508634|FAM32A:NM_001105004:50_cdna UTR3_Alt 1 NULL GeneID:508634 7 GENE FAM32A MGC166090 family with sequence similarity 32, member A EMBV3_13108 GCACTGTGCTGACCATCACCCACAGGTTGAGCACCATTATTGACAGCGAATGGATAATGG Gene GeneID:100337076|LOC100337076:XM_002691936:2_cdna Constitutive 0 NULL GeneID:100337076 12 GENE LOC100337076 NULL ATP-binding cassette protein C4-like EMBV3_03028 GTACTGGTACTGTATGCGTGCCGGCTAAAAGGAGGGTGCGGGATTCTTTACAGTCTGAGA Gene GeneID:507804|KPNB1:XM_002695920:289_cdna Constitutive 0 NULL GeneID:507804 19 GENE KPNB1 NULL karyopherin (importin) beta 1 EMBV3_42207 GGACTGCAGCACTTGTCTTGCTGGACTTGGAGTCGGGTTTTGGAGTGTTCCCTCTAGATT Gene BVV0102_458068 + 1 EMBV3_38593 GK000003.2:113266325-113369454 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09858 GAAAATGGCACCTCCGAAATTGAGCCCTCTGAAACGGATATGGCAAAAGCGGAGACCTTC Gene GeneID:615633|LOC615633:XM_002699871:85_cdna Constitutive 0 NULL GeneID:615633 X GENE LOC615633 NULL similar to Histone H2B type F-M (H2B.s) (H2B/s) EMBV3_20281 GGCAATGAATTTCTGAATACGGTGGAAGACTATAACCTTGGGTCAAATGAGTGGAGCCCC Gene BVT0101_011949 + 0 NULL GK000016.2:67759858-67774073 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070017 TCONS_00070011 TCONS_00070004 TCONS_00070016 TCONS_00070009 TCONS_00070012 TCONS_00070005 TCONS_00070008 TCONS_00070015 TCONS_00070014 TCONS_00070007 TCONS_00070006 TCONS_00070013 TCONS_00070010 1 XLOC_042115 Coding TCONS_00070017 XLOC_042115 Coding Coding IVNS1ABP 16:67764139-67777311 = TSS52088 3623 1 TCONS_00070017_2 642 13 0.725912990661301 0.00140324949265654 0.00375995326959517 0.00180857853629036 0.0023850095481974 0.00407679392537276 0.000555946264237746 0.00476378838432048 0.00216281284808461 0.00543984133001526 0.00124135119478328 0.00167686820846141 0.000230015882770087 0.000400085203799756 0.00185320807221423 0.000327437874283541 0.0120727963762639 0.000968700549645414 0.00544561125707138 0.00311648445655205 0.00402346732832039 0.000962605847131117 0.00535446457464929 0.00498268165033476 0.00475764943805418 0.00211612339288219 0.00366635100074753 0.0016108871566031 0.00189632533705702 0.00130192899668525 0.00222780002005694 NM_001046184.2 IVNS1ABP Bos taurus influenza virus NS1A binding protein (IVNS1ABP), mRNA. 0.0 6529 99.97 0.999723985647254 NM_006469.4 IVNS1ABP Homo sapiens influenza virus NS1A binding protein (IVNS1ABP), mRNA. 0.0 4525 87.68 0.999171956941761 TCONS_00070017_2 sp|Q920Q8|NS1BP_MOUSE NS1BP_MOUSE Influenza virus NS1A-binding protein homolog; 0.0 1310 97.20 0.998442367601246 8 coding 0 0 0 0 0.00786313312600675 0.957019345477385 0.0595532421572215 0.454552529658658 CTAAATTTAAAAGGAAAAATGATTCCCAATGGATATTTAATGTTCGAAGATGAAAATTTCATTGAATCTTCTGTTGCCAAATTGAATGCCCTGAGGAAAAGTGGGCAGTTCTGTGATGTTCGACTTCAGGTCTGTGGCCATGAGATGTTAGCACACAGAGCAGTCCTGGCCTGCTGCAGTCCCTATTTATTTGAAATCTTTAATAGTGACAGTGATCCTCACCGAGTTTCTCATGTTAAGTTTGATGATCTCAATCCGGAAGCTGTTGAAGTCTTGTTGAATTATGCCTACACTGCTCAGTTGAAAGCTGATAAGGAATTAGTCAAAGATGTTTATTCTGCAGCAAAAAAGCTGAAGATGGACCGTGTAAAGCAGGTTTGTGGTGATTATTTACTATCTAGAATGGATGTTACCAGCTGCATCTCTTACCGAAATTTTGCAAGTTGTATGGGAGACTCACGTTTGTTGAATAAGGTTGATGCTTACATTCAGGAACATTTGTTACAAATTTCAGAAGAGGAAGAGTTTCTTAAACTTCCACGGCTAAAGCTGGAGGTAATGCTTGAAGATACTGTTTGCTTGCCCAGTAATGGCAAACTGTACACAAAGGTAATCAACTGGGTGCAGCGTAGCATCTGGGAGAATGGAGACAGTCTGGAAGAGCTGATGGAGGAGGTTCAAACCTTGTACTACTCAGCTGATCACAAGCTGCTTGATGGGAACCTACTAGATGGACAGGCTGAGGTGTTTGGCAGTGATGATGACCACATTCAGTTTGTGCAGAAAAAGCCACCACGTGAGAATGGCCATAAGCAGATAAGTAGCAGTTCCATTGGATGTCTGTCTTCTCCAAATGCTACAATACAAAGCCCTAAGCATGAGTGGAAAATCGTTGCTTCGGAGAAGACTTCAAATAACACTTACTTGTGCCTGGCTGTACTGGACGGTATTTTCTGTGTCATTTTCCTTCATGGGCGAAACAGCCCACAGAGCTCACCAACAAGTACTCCAAAACTCATTAAAAGTTTAAGTTTTGAGATGCACCCAGATGAGCTCATAGAGAAGCCCATGTCTCCTATGCAGTATGCACGATCTGGTCTGGGGACAGCAGAGATGAATGGCAAACTCATAGCTGCAGGTGGCTATAACCGAGAGGAGTGTCTTCGAACAGTTGAATGCTATGATCCACACACAGATCATTGGTCCTTTCTTGCTCCCATGAGGACACCAAGAGCACGATTTCAAATGGCTGTACTCATGGGCCAGCTCTATGTGGTCGGTGGATCAAATGGTCACTCAGATGACCTGAGTTGCGGAGAGATGTACGATCCAAACATGGATGACTGGACTCCTGTTCCAGAATTGAGAACTAACCGCTGTAATGCAGGAGTGTGTGCTCTGAATGGGAAATTATACATCGTTGGTGGATCAGATCCATATGGTCAAAAAGGACTGAAAAATTGTGATGTATTTGATCCTGTAACAAAGTCATGGACGAGCTGTGCACCTCTTAACATTCGTAGACACCAGTCTGCAGTCTGTGAGCTTGGTGGTTATTTGTACATAATTGGAGGCGCAGAGTCTTGGAATTGTCTGAACACAGTAGAGCGTTACAACCCTGAAAACAACACCTGGACTTTAATTGCATCCATGAACGTGGCTAGGCGAGGAGCTGGAGTGGCTGTTCTTGACGGAAAACTGTTTGTAGGTGGTGGCTTTGATGGTTCTCATGCCATCAGTTGTGTGGAGATGTATGATCCAACTAGAAATGAGTGGAAGATGATGGGAAACATGACTTCACCACGGAGCAATGCTGGGATTACAACTGTAGGGAACACAATTTTTGCAGTGGGAGGATTTGATGGCAATGAATTTCTGAATACGGTGGAAGTCTATAACCTTGAGTCAAATGAGTGGAGCCCCTATACCAAGATTTTCCAGTTTTAACAAATTGAAGACCCTTTCAAACTAACAGGCTTAGTGATGTAATTGTGTTTAGTAGAGGTACACTTTGTGAATAAGGAGGGTGGGTGGGTATAGATGTTGCTAACAGCAACACAAAGCTTTTGCATATTGCATATTATTAAACATGCTGTACATACTTTTTGTGTTTATTGGGAAAGGAATGCAAAGATGAAGGTCTGTTTTGTGTATTTTTAGGACTACTTTGGTTACTTTTTGGAAGTTGATATTGTAAAAGAATAAACCAAGAATTGATTGGGAACGTCATTTCAAGAAGTCCCCTCTCCTCCACATTTGTTTTGCCAGTTTGCACATTAAATGACTCTTTCTCCTCAAATGTGTATTATGGGGCAAGAGGGGTAGGGTAAGATATAGGCAGTTGGGTTTTTTCAAGGGCCCTTTTTCAGTAACTGGAACACTCTACAACAAAGAGACTTATTTAACTAGATGACAGTGACTATTTTTGTTTTTATTAAAAGGAAGCTTACATGCCTACCAAGGTTTAATCTTTTATGATTGCCTTTTTATAACTTTTTGTATTCTTAGCAGAGTACTTTCTTTACCTGTTGAAGTTAACACGTCGCAGGTTCAAATTACTGAAGCAGAGTGGCAGTCTTAAAAGTATGCAGTGAGGTGTTTTATACTCACAGAATACAAACTTCAGAACTTTTGCCTTAGCTACAGGTTTTTTTTTTTTTCGAGAATGCAATACCAATGTTTATTTGAATGGGGTTGCTGAACAGTAACATGGCTGTGATTTTTATTTGATACACTGTTTTTAAATACTTTGACTTCTTGGGGGTGTATTTTATATAGCAAAACACTCAATATTATATATAACAGTAAAGAACAGTGAAGTATTTTATCTTCTAAATAATTCCTATTTTTTATCATTAACAAAACAATCCTAAAATAGCAGTCCTTGATTGTGGGAAAAAAATTACCTTAAACTGTACTGGGTTTATGAATGCAGCCTTATCAGAACTCTGTCTTTGTTCAGTTTGTCTATTCATACGGATAAACACTGGTTGGAGTGGTGACTTGGTATTGTGTAATGCTACACGTGTAACTTATGGTGCCAAAATTAGAACATCCTAATGCTTGCTGTTGATGCAAACGTATTAAAGGTACTTTGCAGGAAATCCTTGCACCATGGGATTATTCTCCAAAAGTTGTTTGTGTTCTTTTTCATTACTAAAAGTTTTGGGGGGTGATTTTTAAAATTTTTTTCCCAGTAACAATGAGCTTAAGTTATTTGTGGGAAAATACTTACCTGGTATCTTACATCTGAAATAAGGACTGTTGTTTGGGGGGGTTTTTTGTTTATTTTTTGCTTTTCTCTGAGAAGGCAAAGAGGCACATGGGAATCTCATGAGCCACCTGGGACCATATGACTTATCCAGTGTCTTAAGTTGGGTTAAGAAGAAAATTAGTTTTTTCCCCAAGTGTTCCACTGGTGCTTTGACACCTTAGTTCACTCCTCTGTTCCACAAAGAACCACTAAGAAAGGAAATCAGTTTGCCTGGTGGCTCTGTAGTTCCTGACTATCACTAGTTTCATTCCAGACTGAAACTAGGTTGGCAGATTTGAATCGGACTTTTTAAAAAGGTTCTGTGTATGTTTTATTTATTTAGCACAAGGAAATAAAATTTTACTGGAGG EMBV3_40106 CAAGCCGGCCTCAGAGCACTATGACGACGAGGAAGGCAACGAACAGGATCAGGACCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00247 TTACAAGGATTCATGGAGCGGGATCAGATTACCAGGAACATAGGAGTGGATTCCTGCCCC Gene GeneID:615796|SFRS1:NM_001076394:48_cdna UTR3_Alt 2 NULL GeneID:615796 19 GENE SFRS1 MGC139904 splicing factor, arginine/serine-rich 1 EMBV3_22757 TCTGACAGTAGGGGTATAGAATAAGGTATGGGGAGGCAGAGAGCAAGAAGCAGGAACCAC Gene BVT0102_035829 + 0 NULL GK000001.2:80649368-80673150 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32604 CAGTTTTACCATAAGTGTTATTTAGCCAGCCCTGTTAGTGGGCATTTAGCGAGCAGCTAG Gene BVT0102_299841 + 0 NULL GK000007.2:21255462-21265024 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22889 AAGGGGGGTGGTGGGAGGGAATGGGCAAGTAAAAGACTGAACCAGTTTAGTAGCAGTATC Gene BVT0102_095918 + 0 NULL GK000002.2:131664176-131706264 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104045 TCONS_00104058 TCONS_00104044 TCONS_00104051 TCONS_00104054 TCONS_00104052 TCONS_00104059 TCONS_00104049 TCONS_00104056 TCONS_00104053 TCONS_00104057 TCONS_00104055 TCONS_00104046 TCONS_00104050 1 XLOC_062282 Coding TCONS_00104056 XLOC_062282 Coding Coding USP48 2:131659550-131696608 j TSS77135 2482 1 TCONS_00104056_6 622 19 0.933534824729471 0.0270753562588343 0.0200139013238798 0.0215778692197233 0.0178114759440761 0.0188711157033901 0.00706989864951701 0.012757934314579 0.0181605103825915 0.0212088417031581 0.00168017319833995 0.000227434173329914 2.69858932008165e-05 0.00212305214926537 0.0023455552337347 0.00445796784549463 0.10909794387716 0.0546059803942671 0.0651081321724458 0.0274292458443219 0.0223295222197785 0.0115462159362852 0.0403618233324018 0.043489101884946 0.040538537191588 0.0252443495635186 0.0244609621135349 0.0143275594777926 0.010779551573358 0.00711944608595871 0.0188343143606234 XM_003585792.2 USP48 PREDICTED: Bos taurus ubiquitin specific peptidase 48 (USP48), 0.0 4444 100.00 0.992344883158743 XM_005246012.1 USP48 PREDICTED: Homo sapiens ubiquitin specific peptidase 48 (USP48), 0.0 3481 91.34 0.999597099113618 TCONS_00104056_6 sp|Q86UV5|UBP48_HUMAN UBP48_HUMAN Ubiquitin carboxyl-terminal hydrolase 48; 0.0 1223 96.78 0.998392282958199 1 coding 1 1 1 1 0.559232730622896 0.0114566687592102 -0.184069450266913 0.0716568275707054 GTTCAGAGCCTGCCAAGTCCCAGACACGGAAGCCTAAGTGTGGCAGAGGAGCCCACTGCTCCCGGAACGCCTACATGCTGGTTTATAGGCTGCAGACCCGGGAAAGGCCCGGCACGCCCATTCAGGTGCCAGCCTTTCTTCAGGAGCTGGTGGATCGAGATAATTCCAAATTTGAGGAGTGGTGTGTGGAAATGGCCGAGATGCGTAAGCAGAGTGTGGATAAAGGAAAAGCCAAGCACGAAGAAGTTAAGGAGCTGTACCAAAGGTTACCTGCTGGAGCTGAGCCCTATGAATTCGTCTCTCTTGAGTGGCTGCAGAAGTGGTTGGATGAGTCAACACCTACCAAGCCTATTGATAATCATGCTTGCCTGTGTTCCCACGACAAGCTTCATCCTGATAAAATACCGATTATGAAGAGAATATCTGAATATGCGGCTGACATTTTCTACAGTAGATATGGAGGAGGACCAAGACTAACTGTGAAAGCCCTGTGTAAGGAGTGTGTAGTAGAACGTTGCCGTGTGCTGCGTCTGAAGAACCAACTAAACGAAGATTATAAAACTGTAAATAATCTGCTTAAAGCAACAGTGAAGAGCAGTGATGGATTTTGGGTGGGGAAGTCCTCCTTACGCAGTTGGCGCCAGCTGGCTCTTGAACAGCTTGATGAGCAAGATGGCGATGCAGACCAAAGCAACGGGAAAATGAATGGCAACACCTTGAATAAAGATGAATCAAAGGAAGAAAGAAAGGAGGACGAGGAGGAATTGAATTTCAATGAAGACATTCTGTGCCCACATGGCGAGTTATGCATATCAGAAAATGAAAGAAGGCTTGTTTCTAAAGAGGCTTGGAGCAAACTGCAGCAGTACTTTCCAAAGGCTCCCGAATTTCCAAGTTACAAAGAGTGCTGTTCGCAGTGCAAGATTTTAGAAAGAGAAGGGGAAGAAAATGAAGCCTTACATAAGATGATTGCAAATGAGCAGAAAACTTCTCTTCCAAATTTGTTCCAGGACAAAAACAGACCGTGTCTCAGTAACTGGCCAGAGGAAACAGATGTGCTCTACATTGTGTCCCAGTTCTTTGTAGAAGAGTGGCGAAAATTTGTCAGGAAACCTACCAGGTGCAGTCCTGTGTCATCGGTCGGAAACAGCGCTCTCCTGTGTCCCCACGGGGGCCTCATGTTTACATTTGCTTCCATGACCAAAGAAGATTCTAAACTTATAGCTCTCATATGGCCCAGTGAGTGGCAGATGATACAAAAGCTCTTTGTTGTGGATCATGTAATTAAAATCACGAGAACTGAAGGAGGAGATGCACACCCTTCAGAAACACAGTATATTTCTGAGCCTAAACTCTGTCCAGAATGTCGAGAAGGCTTATTGTGTCAACAGCAGAGGGACCTGCGTGAATACACTCAAGCTACCATCTATGTCCATAAAGTTGTGGATAATAAGAAGGTGATGAAGGATTCAGCTCCAGAGCTAAATGTGAGTAGTTCTGAAACAGAGGAGGATAAGGAAGAAGCTAAACTGGATGGAGAAAAAGATCCAGACTTTAATCAAAGCAATGGAGGAACAAAGCGGCAAAAGATCTCCCATCAAAATTATATAGCCTATCAGAAGCAAGTTATTCGGCGGAGTATGCGACACAGAAAAGTTCGTGGTGAAAAAGCTCTTCTCGTTTCTGCTAATCAAACATTGAAAGAATTGAAAATCCAGATCATGCATGCGTTTTCAGTTGCTCCTTTTGACCAGAACCTGTCAATCGATGGAAAGGTTTTAAGTGATGACTGTGCCACCCTCGGAACCCTAGGCGTCATTCCTGAATCTGTGATTCTGTTAAAGGCTGATGAACCAATTGCAGATTATGCTGCAATGGACGATGTCATGCAAGTGTGTATGCCAGAAGAAGGGTTTAAAGGTACTGGTCTACTTGGACATTAATCTTTTTGAACACTTGCTGACTGCTCAGAAATGACCCGAAGGGAAGAGGAGTTTGACATGTTAGGGCATTAAAGAAAAGGTGGATTTAAGAATTAAACCATTACATGACTCTTCCAAAAGGCAGAAAACCATTCAAAAAAGTGACTGTCCCAAAATGCCTTATGTCAAATAAAGCAGATTGCACTGAAGGCCATCAGACTTGAAGGAAATGTTTCAAATTTTATATTTAAGGGGGGTGGTGGGAGGGAATGGGCAAGTAAAAGACTGAACCAGTTTAGTAGCAGTATCAGTAAATCATGTTTACATATGAGATTTATAGTCACGGGAGGGAATAAAGTTCCATTCTATTTCCTTGCTCGAGTTTCATACCAGATGCATTGGTCCATGAAGAATTTGTATCACAGTAGATGGGACAACATTCTGCTCTGAACTAAAAGTGATTCTTTAGAGACATAACCTGCTTACCAGTACCTGTCTTTGATTCATATTTTACTTTCAATAAAGCATGAAAGTGAAGAACTTGCTGTAATTGTGGGAAA EMBV3_27197 ACACTCAAAGACACTGAACTCTCAGCCTGAGGCAGAACTGAGCACATTTGAGCAGGGGAT Gene GeneID:616970|LOC616970:XM_002690627:29_cdna Constitutive 0 NULL GeneID:616970 10 GENE LOC616970 NULL similar to TRD@ protein EMBV3_00659 CCATGGTGGAGACGTCCAAGAAGACAGTGAGCGTCCAGGAGTTTGCACGCCATTTAGACT Gene GeneID:100336987|LOC100336987:XM_002688937:139_cdna Constitutive 0 NULL GeneID:100336987 7 GENE LOC100336987 NULL GIPC PDZ domain containing family, member 3-like EMBV3_41304 GCGAGACGGACGCGTGACTTGATGTTTTCTGACTCTTCCTAGATGTCAGCACCTGAACTA Gene BVT0101_080884 + 1 EMBV3_27543 GK000021.2:22183355-22192639 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18311 CTTTCCATACCTTAATATGCCCTCTAACGATAGCACTACATGTTTTAATCATTGGCAGTG Gene GeneID:517111|RDX:NM_001075749:8_cdna Constitutive 3 NULL GeneID:517111 15 GENE RDX NULL radixin EMBV3_07439 GAGGCCAAGTGGCTGGAATCCTGTCCTTCAGCTCTGAGAATTGCACCGACATCTTCAAAC Gene GeneID:512272|GZMM:XM_002689139:119_cdna Constitutive 0 NULL GeneID:512272 7 GENE GZMM NULL granzyme M (lymphocyte met-ase 1) EMBV3_15844 GTCAAACGCCTTCCTATCAAGCGCCACAAGGTTTGAGAACATGTCAGAGAAACTTCAAGC Gene GeneID:751563|LOC751563:NM_001102370:167_cdna Constitutive 0 NULL GeneID:751563 23 GENE LOC751563 NULL prolactin-related protein 12 EMBV3_24587 GTTGTTACTAAACCCTCTTCTTGTCCAGACTCAGGGGAGGACTCTTTGCAGGGCCTTGTA Gene BVV0102_086932 - 0 NULL GK000022.2:7244952-7281241 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18961 CTTTCGCTGTGAACATGGACTCTCCTCGCCCCTCTTATTTGCTCAAACGGGGTGTTGTAG Gene GeneID:281605|ADRB2:NM_174231:16_cdna Constitutive 0 NULL GeneID:281605 7 GENE ADRB2 MGC137344 adrenergic, beta-2-, receptor, surface EMBV3_40364 GGAGACACTTGTTAAGAAAACAGCCGCACCAACAGTGCCACCTAAAAGGCAACCATAGGC Gene BVV0102_291635 - 0 NULL GK000008.2:76152279-76179269 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05012 TGGCCCACCTCTTAGCCTCTCCATGTACCTCAAGACCTATGTTACAGCATCCGACTTACA Gene GeneID:538866|HIPK3:XM_002693498:152_cdna Constitutive 0 NULL GeneID:538866 15 GENE HIPK3 NULL homeodomain interacting protein kinase 3 EMBV3_00944 TAGTGACCAAAATGGTGGCCTACTGACTGGTCTAACTGATGGTGGTCCTTAGCAACAGCC Gene GeneID:617714|EFNB3:XM_002695831:215_cdna Constitutive 0 NULL GeneID:617714 19 GENE EFNB3 NULL ephrin-B3 EMBV3_17910 CCCGGAGTTCAGGTCTTTCTCAACATCAGAGAACTCATACTGCAGGGAAATCTCAGAAAT Gene GeneID:100336984|LOC100336984:XM_002683767:2_cdna Constitutive 0 NULL GeneID:100336984 18 GENE LOC100336984 NULL zinc finger protein 682-like EMBV3_03296 ATTCTCGGAGCGCGAGCGAAGTGCGCGACAACAGGACGAGGCTCCAGCCACTGTCTACTT Gene GeneID:100139031|LOC100139031:XM_002697042:498_cdna Constitutive 0 NULL GeneID:100139031 22 GENE LOC100139031 NULL hypothetical protein LOC100139031 EMBV3_35159 AACCTACCAGAAATGTTTGGGGATGTAAAGCATGGCATGGGCATCCCCTCCATTTCTATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10900 TCAAGACAGACCATCAGCCAAAGCACCTAAGAGTGAGAAGAGGCAGCCCCCCAAAGAACA Gene GeneID:534225|UHRF1BP1:XM_002697198:24_cdna Constitutive 0 NULL GeneID:534225 23 GENE UHRF1BP1 NULL UHRF1 binding protein 1 EMBV3_13801 CCGCCGCAGCCAACTCCGCTCTGGAACTTGTCGGATTTTTACCTTTCGTTTTGTAATTCC Gene GeneID:100335875|LOC100335875:XM_002692007:133_cdna Constitutive 0 NULL GeneID:100335875 12 GENE LOC100335875 NULL transmembrane protein FAM155A-like EMBV3_24888 CCTCTCCTGTGAGTCCAGAGGGGAGTAGAGGCAAACACCGAGCCACCTAAGCTGAGTAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06540 CTGAAGACCCTGATGCTGCAGATTGCAAAGCAGGACTTGTGCCGACAGCTCCACGCTCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05663 ATGAGGAGTTAGGGAACAGTGCCATGGAACATTGCTCGGTTTAGAAAGAGAGGAAACTGC Gene GeneID:538491|TMEM178:XM_002691292:386_cdna Constitutive 0 NULL GeneID:538491 11 GENE TMEM178 NULL transmembrane protein 178 EMBV3_38337 AGGTTCCTGGTTAGAAATCACGCAGGTAAAATGGGGGTGGCCCAAGGCAAACCAAGGTCA Gene GeneID:511097|SLC46A1:NM_001079585:94_cdna Constitutive 0 NULL GeneID:511097 19 GENE SLC46A1 TRPE solute carrier family 46 (folate transporter), member 1 EMBV3_32011 CTTCTCAGTTCATGCTGTTCCCCACTCACACCCCCAGGCAGGGTTGGAAATGAAGGACTT Gene GeneID:537511|PHC2:XM_002685604:239_cdna Constitutive 0 NULL GeneID:537511 2 GENE PHC2 NULL polyhomeotic homolog 2 (Drosophila) EMBV3_05145 TATTGTGGATTTCTGTCTCCCTTTGGAACACCCAGACGGCTCACCAGTGGTTCACTATCC Gene BVV0102_253485 + 1 EMBV3_12788 GK000011.2:4424371-4425379 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023826 1 XLOC_014369 Coding TCONS_00023826 XLOC_014369 NonCoding Coding EIF5B 11:4424900-4450690 j TSS17637 735 1 TCONS_00023826_3 93 2 0.971577028965838 0.00118553916310703 3.47706663869927e-05 0.000265121703518429 0 3.23902755562669e-05 9.21772197608958e-05 2.97371706504502e-207 6.0232056958283e-173 9.74284254695521e-05 1.37966649885001e-05 3.46053227109158e-06 0.000119041970446228 0 9.25640881090597e-05 0 0 0 8.65710356954804e-05 0.00281328289541418 0.00879534364982396 0.00444491586693132 0 0 7.53599932539939e-05 0.0491077112007388 0.0208020138944553 0.0132104092193982 2.41228206769754e-05 7.23569119192402e-124 0 XM_005193822.1 EIF5B PREDICTED: Bos taurus eukaryotic translation initiation factor 5B (EIF5B), transcript variant X2, mRNA. 1e-157 560 100.00 0.420408163265306 NM_198303.2 Eif5b Mus musculus eukaryotic translation initiation factor 5B (Eif5b), 1e-106 390 87.58 0.425850340136054 0 noncoding 0 0 0 0 -0.328831560959009 0.144187871642501 0.0236706490168197 0.614726782222711 GTCTTTTTTAATGGTTTCTGTTTATTTGTTTTGGTAATTCATGGACATGACTACGAGGCTCAATATTGTGGATTTCTGTCTCCCTTTGGAACACCCAGACGGCTCACCAGTGGTTCACTATCCTTCTTTATTGAACTTCACGCAGCTGAGTACAAAGGGACAGAGGTTAAAGGTGGAAGGGAAGCCCAAAGTCTACTTTTGAACTGAGATCCAATTCCCCAACTCTGCGTCCCCCAGCAGGGAGAGACCCGACGGGGGAAATTTCCAACCTCATTGTCCACCTCGGGGTTCTAGAATCTTGAAACCCCGCGGACCTCGGAGCGCCGCGGACGCGTGCCGGAAGGGGGCGCTCCGGTTTCCGCCTGACGGGCGGGGTAACTAGAGACGCTCTACCCGCGGCGCAGCTCTCGATGAGCCGCGCCCTGCGTCCCCACGCCGAGGCGGCGGGGCGATGCGCTTGCGCACTCGGAGCTCACACCATATGTGCCCTGTCCCAGTGCGCGGGTCTGTGGAGAGCCGGGTGCGAGAGGAGGCAGCGCGAGGGGCACGGAGCCGAGCGGAGACCGAAGTCAGCCGAGGGACAGCGGGTCTGTGAGAGACCAAGTAGAGGGGCTGGGGCTGCGAGCGCCGCTGACACACGATGGGGAAGAAGCAGAAAAACAAGAACGAAGACAGAGGAGTGTGGCCTCTGAAAACACTGCCTTGATTGAGTACCATGGAAAATTGCCTTTTATT EMBV3_17298 GGACCAGGCGGGTCTCGGGGCTCGCGGAAGTTGAAGACTTGATCAAATACCTGGATCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00130 TACATATGCAGTGGGCAAGGAGACACTCTGTGCTTCACCGTGGACTTTGCTCTTGGATTC Gene GeneID:615686|SNTG2:XM_002683947:9_cdna Constitutive 0 NULL GeneID:615686 Un GENE SNTG2 NULL syntrophin, gamma 2 EMBV3_19833 TACCCAAGCCCCTCCATCTAGAAACATTCTTTTTTCAACAGCATAGGGGACGCCTGCAGC Gene GeneID:785262|LOC785262:XM_002707907:40_cdna Constitutive 0 NULL GeneID:785262 X GENE LOC785262 NULL similar to hCG2044193 EMBV3_06306 ATCCAGGACACACTGCACTGCGTCAAGCCATCCCTGCTGTCTCACGTGGAACAGCTGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00431 TTGTATTCTCGAGTCAGTCCACTCGCAAACAGACCAAATGAATGAGCAGAGGGAGGCAGG Gene GeneID:616297|LOC616297:XM_002692255:1556_cdna UTR3_Alt 1 NULL GeneID:616297 13 GENE LOC616297 NULL similar to MRG-binding protein EMBV3_33007 GATTAGAGGTGGCTGGTTGCGTGAAGGACATTTGAGAAGTGATCCTGGCTATCACGAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23580 GAAGCCTGCATGCCCCCTCGACACAGACAGGCCAAGTACTTGACCAAGAAAACCCAGGCT Variant GeneID:281991|POLD2:NM_174428:10_cdna 656^854 2 EMBV3_14847 GeneID:281991 4 GENE POLD2 MGC138082 polymerase (DNA directed), delta 2, regulatory subunit 50kDa EMBV3_26284 CCAGGCCTTTCAGAAAACATGGAGTTGTTCCTTTGGCCACATACATGCGAATCTACAGGA Gene GeneID:784061|LOC784061:XM_002699744:195_cdna Constitutive 0 NULL GeneID:784061 X GENE LOC784061 NULL similar to 60S ribosomal protein L21 EMBV3_29014 GACAGAGCCCCCATGTAAAATCAAATATACTCTCAGGAAGCATTCGGAGCCTGTGGAGAG Gene GeneID:616897|C8H9orf21:NM_001076436:11_cdna Constitutive 1 NULL GeneID:616897 8 GENE C8H9orf21 C9orf21 MGC140765 chromosome 9 open reading frame 21 ortholog EMBV3_33112 TCCTAGAGGAGAAACTGGGGTATCGGCATGCATTAGATGTCACTAGCTCTCAAGAGGACC Gene GeneID:782251|LOC782251:XM_002689692:134_cdna Constitutive 0 NULL GeneID:782251 8 GENE LOC782251 NULL hypothetical LOC782251 EMBV3_03904 GAGATCATTCTCACACAGGGAAACCTATTATCCTTTGGGGACCTGCCCCTTTCTGCCATA Gene BVV0102_441918 + 0 NULL GK000019.2:27084644-27085161 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34640 CTTCAGGAAGATGTGCCATTTAAAGACTTTCTGGGAGCAGTGTGAAGAAGAGGCGAGAGC Gene GeneID:781180|LOC781180:XM_002692006:130_cdna Constitutive 0 NULL GeneID:781180 12 GENE LOC781180 NULL similar to high mobility group nucleosomal binding domain 2 EMBV3_35015 TTTCCTGAATGGAACCCTCTAACCTCAGAGACACCAGCGATTCCACGACTGATCCCTGAC Gene GeneID:618894|ZNF581:XM_002695377:213_cdna Constitutive 0 NULL GeneID:618894 18 GENE ZNF581 NULL zinc finger protein 581 EMBV3_34863 GGTTCTTGCTTCTCCTCGTCCCGGGCCAGGGTGTCCGCAGGACGCCGACGGCATGAAAAG Variant GeneID:505928|CES2:NM_001034260:123_cdna 187^391 1 EMBV3_30287 GeneID:505928 18 GENE CES2 MGC127393 carboxylesterase 2 (intestine, liver) EMBV3_11741 CGTGACAACCTCAGTGCACAGCGAATCTATGAGATGGAGATAAGAGCTGCAGACAAGACC Gene GeneID:787653|C17H5orf52:NM_001145133:77_cdna Constitutive 1 NULL GeneID:787653 17 GENE C17H5orf52 NULL chromosome 5 open reading frame 52 ortholog EMBV3_10837 GGTTGCATGCACTGGATATTTGCACACCGTTGTTTTTTGGTTATGCCATCTCCCTGGGGG Gene GeneID:534212|NCEH1:NM_001123034:31_cdna Constitutive 3 NULL GeneID:534212 1 GENE NCEH1 AADACL1 neutral cholesterol ester hydrolase 1 EMBV3_40331 TTGCAGCACATGTTGAAACACCCACTCGTGTACCGCTCCAGCAAGCCCAGGCTGGATACT Gene GeneID:369019|XRRA1:NM_203324:16_cdna Constitutive 0 NULL GeneID:369019 15 GENE XRRA1 NULL X-ray radiation resistance associated 1 EMBV3_13140 GGATGTCAACGGCAAGCTGTTTCTTCCCAAATATGCCCTGTCTCAGGATGTCTGTACATA Gene GeneID:281552|TSHB:NM_174205:5_cdna Constitutive 0 NULL GeneID:281552 3 GENE TSHB NULL thyroid stimulating hormone, beta EMBV3_08280 AGATGTTACAGAACATAAAGACAGGGCTGCATGCTGTGGACCGATGGGCCTCCACAGATT Gene GeneID:506005|LOC506005:XM_002689601:2_cdna UTR3_Alt 3 NULL GeneID:506005 8 GENE LOC506005 NULL similar to KIAA1432 EMBV3_23937 TGCGGCTGAGAAGCAGCAACTGAGGGAACCTGCGGACGCATGACCTTGTTAGCATGACAA Gene BVT0102_156254 - 1 EMBV3_21133 GK000005.2:112711647-112802156 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201786 1 XLOC_123431 NonCoding TCONS_00201786 XLOC_123431 NonCoding NonCoding - 5:112735418-112736181 - TSS151354 763 3 TCONS_00201786_3 45 0.133682830930537 1 0 7.13274675346029e-05 0 2.42567812097949e-05 0 5.39229136814838e-07 0 0.000259866896049642 0 0.000165455012234567 4.90229125684879e-07 0 0 0 0 0 0 0 0 0.000122178373180079 0.000169653614414369 0.000721466049671564 0 0 0 0.000290578970865299 0 1.5358121149443e-05 0 6.36250372000264e-06 0 XM_005217760.1 KNTC1 PREDICTED: Bos taurus kinetochore associated 1 (KNTC1), transcript 1e-18 98.7 82.47 0.125819134993447 0 noncoding 0 0 0 0 -0.465268646027052 0.178267520959401 -0.0189113955593419 0.765489953158751 GGTTTTTTTGGTGGGGGGGGTGCTGGCGGCTGGGAGGCACATGGGATCTCATCTCCCCTACCAGGGTTCAAACCTGCACTCCCTGCATTGGAAGGCGAAGTCTCAACCACTGGACCACCAGGGAAGTCCCACAGACGTTTGTTTTTAATGGTGAGAAAACATTATTGCCAGTCCACACCCTACTCATTCCAAAGGGGTAAATCACGGCAAATTATCTGGAGCCACTGAAGGCTTTTGAGTAGAAAAGCGATTGTTTCACAACAGGCACTGTTCTATATCAGGCATGTTTTATATCTTGTAAGTTGCCTCAGTCTGACACAGTCAAAGGGCCCCTCGTCTCTGGGCCCACCCTCTGAGGCTGGCCCCACTCGCTGCCCCGGAACCCTAGCAGGTGCGGCCACTGGAGTGCTGCCTGAACTTCCTGGGCGATATGTGTGCTGGTAAGGCTGATAGCCTATCGGCGACATCTGGGTTGCTGCGACAGGGCTCTTGTCATGCTAACAAGGTCATGCGTCCGCAGGTTCCCTCAGTTGCTGCTTCTCAGCCGCACTGAGAGGGAAAGAAAGCCAGCTTATCACCAGGTAGCCCATGGCCCCTGCAAGCCAGTGAGCAGAGAAAGGCCCACCTGTTGATCCTAAATTCAAATCATCCTGGAGCGAGACAACCTACAATTAAATCCCAGTGCTGACACTCTGCGTCCTCACAAGTTACTTGGTTCATTTCCCCAACTGTACGATGGCTATGTGAGGAGTAAATGAAATAC TCONS_00193473 TCONS_00193474 TCONS_00193475 TCONS_00193476 TCONS_00193477 TCONS_00193478 TCONS_00193480 TCONS_00193481 TCONS_00193482 TCONS_00193483 . 3' 22987 TCONS_00193473 TCONS_00193474 TCONS_00193475 TCONS_00193476 TCONS_00193477 TCONS_00193478 TCONS_00193480 TCONS_00193481 TCONS_00193482 TCONS_00193483 . 3' 23749 EMBV3_25016 AGTTATCCCGCATTCACCCTGGGCTAAATACCTAGCATTGCATGAGTCGTACAGGTACCC Gene BVT0102_009292 + 0 NULL GK000020.2:39272007-39281676 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113910 TCONS_00113905 TCONS_00113908 TCONS_00113903 TCONS_00113906 TCONS_00113904 TCONS_00113909 1 XLOC_069138 Coding TCONS_00113909 XLOC_069138 Coding Coding RAD1 20:39267516-39274088 j TSS85072 2451 1 TCONS_00113909_1 109 0.167686658506732 4 0.627606148227058 0.00100271695413981 6.39576352366769e-31 3.60974242328671e-05 3.32869618570261e-12 4.92469469107184e-08 0.000615928670613426 0.000421943278498305 5.25594129149704e-33 0.00036380409671402 0.00129690659013492 0.0011587033354953 0.000346581337708576 3.43852008839008e-71 3.27603446385359e-60 0.000207343554018411 0.00390251917808035 0.00362127174189712 0.00223936194421058 0.000947990778493546 0.00233562664302143 0.000411845042673637 0.000874696504545396 0.00129994503729298 0.00100284951562855 0.000459943732487012 5.55198754720818e-16 0.000440188974910596 0.000194295521659579 3.99294923269481e-06 6.39172874040955e-05 XM_005221599.1 RAD1 PREDICTED: Bos taurus RAD1 homolog (S. pombe) (RAD1), transcript 0.0 4414 100.00 0.997960016319869 NM_002853.3 RAD1 Homo sapiens RAD1 homolog (S. pombe) (RAD1), transcript variant 1, 7e-166 589 81.09 0.248470012239902 TCONS_00113909_1 sp|O60671|RAD1_HUMAN RAD1_HUMAN Cell cycle checkpoint protein RAD1; 1e-74 227 97.25 0.990825688073395 1 noncoding AGGTCAGAGGGGCTCCGTGAAGCATTTTCCGAGTTGGATATGACGAGTGAGGTCCTGCAGATCACCATGTCTCCAGATAAACCTTATTTCAGGTTATCTACTTTTGGGAATGCAGGAAGCTCCCACCTTGACTATCCCAAAGATTCTGATTTGATGGAATTATTTCACTGCAATGAGACCCAGGTCAACAGATACAAGATTTCTTTACTGAAACCCTCTACAAAGGCATTAGTCCTGTCTTGTAAGGTATCTATTCGAACAGATAACCGAGGATTTCTCTCATTACAGTATATGATTAGAAATGAAGATGGACAAATATGCTTTGTGGAATATTACTGCTGTCCTGATGAAGAAGTTCCTGACTCTTAGTCTTCAGTATGGCAGTTCACGCACTGTTTATGTACACATGCATAGTAAGTCATGTTCTCATGCTGAGCGCAGTGCCCTTCATGACTTCCTGTTAAGATTTTCTAAGGGGAAGAAGCAGGGAGGAGGAGCAGCACAGTCCCTGTCCCGATAGTTGCTGTAGGTTTTGTCAGTAATGTTGTCACGTAGTCATAGATTATCCAGTATGGACTAGTTTGTGGTTCTGTCTTTTGAACTCACGGAAATTGTTACAAGTCAAGGTGCATAAGTTTTATGTGTTATTCTACTTAAGTAGGACATTCCAAGAGTATAAAAATTTGAAGTTTGGTGAAGCCATATCAGAAATGTTCTTTTATGTATTTACTATTAGAAAAAGCAATAGCATATGGGCATCACTTCCTAGTTGGAATTCTGGAGACTCTGTCATAAAGCAGTGGTTCTCAGAGTGTCATGCCTAGACCACCTGGAAACTTGTCAGGAACTCTGAGGGTGGGGCCAGCAATCTATAGTTTAAACAGCTTCCCCCCTTCACCGCCCCACCCCCCGAGATTCTGATCCTTGCTAAAGTTTGAGAACCACTGTTTTAAAGGATATTTTTTAAAAATAGCATTTTAATTGCATTGAAGTGACTGCTTTTACAGGTGATGTCTTTGCAAGTGTTCTGAAGTTTAGGTGTCACCAAACAAGTCTGAATAATTATATGATTTATTTACATTTTGAAGGCATTTATGAACATGATATAAAACAGTCTTCAGAATTACAGGTTTTCATCTTGTTCTGAAAACCATTCATTGTAGTAAGTACTTATTAGATACCTTCTATTTGCCTATAAGAGTTCCTCAACCAGGGCTTCCCAAGTGGCTCAGTGGTAAAAGAATCCACCTGCCAATGCAGGAGACACAGGTTCCATCCCTGATCCTGGAAGATCCCACATTCTGTGGAGCAGCTATGCCCATGTACCGCAACTGCTGAGCCTGTACTCTAGAGCTTGGGAGCTGCAGCTACTGAGCTCATGTGCCCTAGAGCCCGTGTTCTGCAACTAGAGAAAAGCTTGCACATGACAAAGACCTAGTACAACCAAAAATAAATTTTTTTTTTTTAAGTTTCTCAACCAAACCAAGGCATATCTCAGTGGGCAGGCACGTAGGCGCTGCTCCCGGGTACCTGTACGACTCATGCAATGCTGGGTATTTAGCCCAGGGTGAATGCCGGATAACTAGTTAAGTCTCCCAGGCAATCTCGGGATGCCCAGCTGGTACAAAAGTCGTTGGAGTTTTGTAAAGTTACAGTATGTGTTCAAGAAGGAAATGATTGAATCTGCCAAATGTCCAGATTTTTTTTTGTCTCAATAAGCATTAAGAACAAAACACGTCTAAAACATAATTATGGAAATACTTAATCAGTAAACATTTCAAGAACTACAATTTTCCTTTAAATTTAAAACTGGACAGTTACTTGGTTTTTTTCCATTGGCATGTCTAGTATCTAAAATAGTGCCAGGATAAGGTAAATATTCATCAGATAAAAGGACCTCCACTTTCAGATTATTAGTCACTATGAAAGTTGAACCTATGATTAAATAAGACTGACATTTTTGCACATTTAAGACTACTATTTCAGCTGAACATATCTTGAGTTACTTAGAATTCAGAAGCTAATAAATTTAATTCTTTCTCAGTCACCGTAACATCAAGATATGTTTTAATAAAGAATTTTCTAGTTATGTGTGTTCTGTTTGACTCCCTAATTTGCTAGCCTAACTTTGTTCAAGTTCCTATGAGAGACCACTGGGGGGAGCACTTACTTGGGCAACGCAGATGCTTTGGTGACTGTAAGTTGAGTTCACGTGTCACAAAAGACTAAGATTTAGCTTTACCTTTCTGAAGTTTACCTCATATTCTTTCTAATAAAATTGTAATAAATTTTAAAATTGTAATTCTAATAAAATTAACAGTAGCTATTTTTTTCTATTTTTAATTAGTTTATTCCCAACTTATGATTATGCTTCCACCTAGAACTGATGAAATGATTCAAAACAAAAATGTTAAATTTTACTGTTGTAATAAAAATAAGTCTTGTAATACA EMBV3_21164 TTTGCTATAAAATCTGCCTGGGTGGATGACCCGTAGGCATGCATTGGTTTTGAGGGCTAG Gene BVT0102_043706 + 0 NULL GK000003.2:59969594-60082314 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173565 TCONS_00173563 TCONS_00173564 TCONS_00173566 TCONS_00173562 1 XLOC_104391 Coding TCONS_00173566 XLOC_104391 Coding Coding PRKACB 3:60079677-60222152 = TSS128999 4593 1 TCONS_00173566_2 351 0.0600914435009798 10 0.967832727374819 0.00555655175518873 0.00580313993700086 0.00452993479440796 0.00342260605315413 0.00469802307116002 0.00125628461767062 0.00264715581748512 0.000918991117680483 0.00804970409372274 0.00157993314459533 5.47873648897033e-08 3.09182747937651e-05 2.33096761268728e-05 0.00194230931705296 0.00267829964744448 0.00169358713723997 0.00134545858579291 3.82626860501392e-15 1.07184084181936e-06 0.0057408372281165 0.000214679738008255 0.000119535195896324 0.000670493857267845 0.000674178989578848 0.00202182484635047 0.00588455998123479 0.00385977455521334 8.48167119330252e-10 2.50049483113495e-13 0.000129680328463035 XM_005204378.1 PRKACB PREDICTED: Bos taurus protein kinase, cAMP-dependent, catalytic, beta (PRKACB), transcript variant X6, mRNA. 0.0 7696 99.98 0.929457870672763 NM_002731.2 PRKACB Homo sapiens protein kinase, cAMP-dependent, catalytic, beta (PRKACB), transcript variant 2, mRNA. 0.0 4616 82.96 0.961898541258437 TCONS_00173566_2 sp|P05131|KAPCB_BOVIN KAPCB_BOVIN cAMP-dependent protein kinase catalytic subunit beta; 0.0 731 100.00 0.997150997150997 3 coding 1 1 1 1 -0.0391253798427594 0.737720404812841 0.0254361798912398 0.618073622510462 GGAAGGGGGAGTGTCTGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGTTGCCGCCGGGGCTGAGTTCGCTGAAGCCTTGGCTTCAGAACCTGCCTAGTCTTCCCTCCCGCATTCTCGGCGCCAGCCCCAGGAGCACTGAGTGCTGTGACCGGTGTAGAAGCGGGAGCTGCCGTAGCCTGTGGAGCGGCGGGGACGGTGCCAGCCCCGCTTCCCTTCCCTTCCCTCACCCCTTCCTCCCATCGCCCCAGTCATGGGGAACGCGGCGACCGCCAAGAAAGGCAGCGAGGTGGAGAGCGTGAAAGAGTTTCTAGCCAAAGCCAAAGAAGACTTTTTAAAAAAATGGGAAAATCCTGCTCCGAATAATGCTGGGCTGGAGGATTTTGAAAGGAAAAAAACCCTTGGAACAGGTTCATTTGGAAGAGTCATGTTGGTGAAACACAAAGCCACTGAACAGTATTATGCCATGAAGATCTTAGATAAGCAGAAGGTTGTTAAACTGAAGCAAATAGAGCATACTTTGAATGAGAAAAGAATATTACAGGCAGTGAATTTTCCTTTTCTTGTTCGACTGGAATATGCTTTTAAGGATAATTCTAATTTATACATGGTTATGGAATATGTTCCTGGTGGTGAAATGTTTTCACATCTAAGAAGAATTGGAAGGTTCAGTGAACCCCATGCACGGTTCTATGCAGCTCAGATAGTGCTAACATTCGAGTACCTCCATTCACTAGACCTCATCTACAGAGATCTAAAACCTGAAAATCTCTTAATTGACCACCAAGGTTATATCCAGGTCACAGACTTTGGGTTTGCCAAAAGAGTTAAAGGCAGAACTTGGACATTATGTGGCACTCCAGAATATTTGGCTCCAGAAATCATTCTCAGCAAGGGCTACAATAAGGCAGTGGATTGGTGGGCGTTAGGAGTGTTAATCTATGAAATGGCGGCTGGCTACCCCCCATTCTTTGCAGACCAACCAATTCAGATTTATGAAAAAATTGTTTCTGGAAAGGTTCGATTCCCTTCTCACTTCAGTTCAGATCTCAAGGACCTTCTAAGGAACCTGCTGCAGGTAGACTTAACAAAGCGGTTTGGAAATCTAAAGAATGGTGTGAGTGACATAAAAACTCACAAGTGGTTTGCCACAACAGACTGGATTGCTATTTACCAGAGAAAGGTTGAAGCTCCATTCATACCAAAGTTCAGAGGCTCTGGAGATACCAGCAACTTTGATGACTATGAAGAAGAAGATATCCGTGTCTCTATAACAGAAAAATGTGGGAAAGAATTTTGTGAATTTTAGAGCAACAAGATGACATCGGAGCTCACACTCAGTCTTTGCACTCTGTTAAGAGATAAGGTAGAGCCGAGACCCTCCTTGTCAAAGCAGTTACCGAGTTCCTTCATTCCAGCGACTGAGTGAGGTCTCTATTCCCGTCATCCGTGTGTGCACTCTGCATCCACCTCTGTAACAAGGCACCGCTAAGCAAGCATTGTCTGTGCCATAACACAGAACTAGACACTCTCCTGCTTCCCTTTGGTTCGTCATTCTTCTCTTCTTCCACATCCATTCCGTCCTGTTTCATTTCCATTAATTTTTCTGCAAATAGTGCTCATTTTATTTTCTTGGTGTTTCAAATGGGCAGTGTTATGGCTATGTGACTTGGAAGGGAAGGATAAATGTTGCTTTTAGTAACTCTTAACCAATATTTGTGTTGGTCAGTTGCTTGAGGATATGCTTTCTAATAATTATTTTTACTTTGAATAGCTCATACTCAGTTTTTGCCAAAACGCTGGACAGTTTTTAAAGATAGAATGTCTTTTCACCAAGGATATTTACACAAATAAAACATTAACTTTCCTAGAACTCACTAATGCAGAGTAGCTAGACCCAGCAGTTTGGATTCATACAGATCAGAAGCTCTGTGTCACTTCACTGCCTTTTCTGTCATCCTCCCCTTGAGTAAATACGTGACCAACCTGTGCAGTGTGACAGTCTCATTTGCAGGAAAAACTAATAACATGGATCATAATCATCCAGATTCTCTCACTTGGTACCAGCACTTATGTAGGTATCAAGAGAAGAGGTCTAAGATTTATAAACTTTAACTTTCCATAAGGATTTTAGACAGTATTTTAATAGAACATGACTAATGAAAGTGACAAATTTTTAAGTTTCTCAAAAAGTCCCCATTGTAAACTTTTTAAAGGAAGAGAAATGAACTAAAAAGAACATTGATGTGAACAAATACTCATCTAAGCCAAACAAATGGCTGGATTCTTGTAAATGATACAGAGGCACTTTTGTTTAGAGGTATTTTGTTTGTTTTGCTTTGCTTTGCTTTGTCACAGTTAAGAACAAAATTTGTTGCCAGGTGATTATGCTGGTGTACTGTATGTGTCAGCCTGAGATAGAGGCGCTGCTGCAACTTCAGCTTTCGTCCTGTGCCTCGGCAGTGAGGAAAGGGGACAAAACTGCCACAATTGTATTTTAATTTTGAGGTGTGGTATTTTTAGATATGTCATAATTTCTAGCTTCTTTCAGTAAATGGAATTATGATCATGCAAATACAATTTTAGTATTTGTTTTTTTATGAATATTTTTTTGCCAGCTGACTTAATAACATTGCTATCATGTGGAAATTTCAAGCATTTTTGCCCATTTCGTTCACTGTTTGTTGAGAATCCATGGCTTAACTCAATTTTTAAAATTTTTTTTTTCTTTGCTTTTAAATTTCCTGTCTGGTTTTATCTCTGTGTGTCAGTGACCTATCTTAAAACAACACACCAAAATAGTTGAAAATAAACTGTGTTCATTTTTATGATCAATTTACATGCATATAAGATGGGTTGTGTTTAATCAGATTGATCTTAATGTATATAAACACTCTGCTTCATTATCAGGGCAGGTAGGTCACCGATTCTACTTCTTTTCATGTGTACCACACCTTTGTAAACCCTTTGAAGATGCTGAAGAAATGTGTCTGAGATGTTCTCTGCATCAGTCTGTACGTCTTTGGCTGTCGAGTGTTTCTGCATGGTCATGTCACCTAAAGCTGATGCTGATTTGTTGGCCCACTTATATTTAAAATGTGCAAGGAAAATATGAAATACTTTGCTGTAGCAAATTTTATGTAATAAATATCATGTTAATAAATCTAAAACATCATTTGTATAAAATAATTTAGGTTTTTTGTATTTCATTTAGACCCAAGAACATGCTGATCATGTATTCAATATGTATGCTATAAATGCTATGGTACCTATGTTGTATATTATTGTAAAATTATTACATAATTTTAGTAAATCATGGGGTGACGATTTGATTATTACATTTTTAGTTTTCAGTAATTAAAAAGATTTCTGTGAATTCTTAAAAAAACAAAAAGAAAATCATTGAATTACTGTTACCTGGCACAAATTTGCTATAAAATCTGCCTGGGTGGATGACCCGTAGGCATGCATTGGTTTTGAGGGCTAGTTAGCCATTCCATTGAACTTCCATTTGAAAGATATGAGCAAGCTTTGTCCCAATCCATCAAGGGAGTCTGTTTCCAACCACTCAAATACACTGAATTAGAATATCTTAGAATTATATAAAACTCCCAGTTTCAGCCACAATTTAGCCAAAAATAAGATAAAAACTTGAATAAGAAATAAGTGGAATGAATCAGTATTTAATCTCAGATTACATTATTTGAAACAGAAGACATAGTAAGGAGATGACATTGTCAGGAAAGGAGCCATAGACTGAAAGTCAAGGCATCTGAGTGTCGAGCCTTGTCTGTCACTGTCAGCAGTGATCTTGGCCTCAGTTCTCTTATCTGTGAAATGGACACGTTCCATTAGGCAGTTTCTAAGGTCCCTTCTAACTTCCCCATGTTTGATGATTTTTGACATTCTGAGGGGATAACATGCTTTGAAGTAAGTCTCAGTAAGCCGATATTCTAGGGCATCTTTCTTCTCCTTAATTCTTGCAGTGTTCTTACAGTTCTTTGAATATCATGAGAACCTCATGTCTGTTCTGATTCCTTCCTCCTTCACTGATGCTAATTATCCAATTGATATCAAACTGTCAACCTACCAAAATGATATTGTGGCTTGTGGGCATTGCTGTCTTGTTCTGATATGTTCCTGTGGTGAGTGCCCATTGGCCTGAAAATACTCATTGTAAACCTAAAAAAATCATTTTTCTTTCCTACTGTTTTTTCTGCTTGTTGAAGAATCAAATGAAATAATGTATGTGAAAGCACCTTGTAAACTGTAACCTATCAATGTAAAATGTTAAGGTGTGTTGTTATTTCATTAATTACTTCTTTATTTAGAATGGAATTTCCTATGCACTCCTGTAGCTAGGAAATGCTGAAAACAACTGTGTTTTTTAATTAATAACTGCAAAATTAAAGTATCTTAAAAGGATAGAACAATTTGAGTCTTGGATTCTATTTAGTACCCTTATTTCCTGATTTATTTTCTGTGTATACTTCAGATGCTTATGGATTCCTAGTTCTTATGTATTTGGGTGAGAACAGAGCAATAAAGGGTCAAATGGCCACTAGCCTATTCTAACTGGGTGTTCACTG EMBV3_22843 GATTTGGAACAGTGAGCGGTCCCAGGTCAGAAGCTGAAAGTCTGAGCAAAGGTTTAGAGG Gene BVT0102_024047 + 0 NULL GK000009.2:50623293-50873668 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237342 TCONS_00237341 1 XLOC_144690 Coding TCONS_00237341 XLOC_144690 Coding Coding PRDM13 9:50871752-50881408 = TSS177454 4040 1 TCONS_00237341_3 707 4 0.5819782496116 0.00304081143904995 0.00120040721776911 0.00156658861891894 0.00188883568821347 0.00178413553784119 0.000450605704621134 0.00145637298762611 0.00129116920906509 0.00220870158340711 0.000200499872465522 4.67484747303139e-07 1.91182598810527e-08 0.0006746522057534 0.000140976172056567 0.000481859751813487 1.91024456962316e-05 0 7.1430741263352e-11 0.0011962001282799 0.00174431978214815 0.00034634600828109 3.59975293991567e-06 2.70783205547634e-05 0 0.00186129557278561 0.00140023713953061 0.00112385961242297 5.21189385190962e-05 9.87608490337181e-06 5.83344986316765e-06 NM_001193010.1 PRDM13 Bos taurus PR domain containing 13 (PRDM13), mRNA. 0.0 3831 100.00 0.525495049504951 NM_021620.3 PRDM13 Homo sapiens PR domain containing 13 (PRDM13), mRNA. 0.0 3359 85.41 0.730940594059406 TCONS_00237341_3 sp|Q9H4Q3|PRD13_HUMAN PRD13_HUMAN PR domain zinc finger protein 13; 0.0 1100 90.27 0.998585572842999 4 coding 0 0 0 0 0.00207699666260827 0.991775338522448 -0.0588790269974739 0.614107529594856 ATGCACGGAGCTGCCCGCGCTCCGGCCACCAGCGTGAGTGCCGACTGCTGCATCCCAGCCGGCCTGCGCCTCGGGCCGGTGCCCGGAACCTTCAAGCTGGGCAAGTACCTGTCAGATCGCAGGGAACCCGGGCCCAAGAAAAAGGTGCGCATGGTGAGAGGGGAGCTGGTGGACGAGTCGGGGGGCTCCCCCCTGGAGTGGATAGGGTTAATCCGAGCAGCCAGGAACCCCCAGGAACAGACTCTGGAAGCTATTGCAGACTTACCCGGAGGACAGATCTTCTATCGAGCACTGCGAGACGTCCAGCCAGGGGAGGAGCTGACCGTGTGGTATTCCAACTCCTTGGCGCAGTGGTTCGACATACCCATCATTGCTACTCCAACGCACGACGAGAAAGGGGAGGAGCGCTACATTTGCTGGTACTGCTGGAGGACGTTTAGATATCCCAACAGCCTTAAAGCACATCTACGTTTCCACTGCGTGCTCAGCAGCGGCGGGGGCCGCGCCTACCTGCACCACGAGCACGCGGCTCGCCAAGGCGCTGCCCCGGCCGCGGATGGCCTTCGCCTTTCCCCGAAACCCCCGGCATCAGATTTCGCTGCGGCCGCCCCGGCGAGCACTCTTCGACCGCACCCGCAGGTCCCACCGGCCCCTCAGGCTTGCGGAGCGCGGGAGAGCATCAAGCGCGAGGCCTCCTCCGCGCCCTCCGCCACGTCACCGACCCTGGCCAAGTGGGGGCCGTCCAAGAAGGGAAAGGAGCAGCCGGACCGCGCTCTGGACATGAGTGGTCCCGCCCGAGGACACGGCCACTTCCTTGGCATCGTGGGCGGTTCCCCAGCGGGGGGCGGCGGCCTCGCTTTCTACCCGGGCGTGCGCTCGGCTTTCAAGCCTACTGGCTTGGCCAGGGCAGCCGCCGCCGCGCACGGCGACCCCTACCGGGACGAGGGCGGCGGCAAACCCGGGGCCGGCCTGGCTTTAAGCAGGCTGCTGGGTGGGGGACGGGCAGGCGGACACCCGAGAAGCGGGGAGAACCCGGCGGCTGGCGGCGCTGGCCACCACCATCACCACCATGCGCACCACCATCACCATCCCAAGTGCCTACTCGCGGGGGACCCGCCGCCGCCTCCTGGCCTGCCCTGCTCTGGCGCTCTGCGCGGCTTCCCTCTGCTCTCCGGGCCCCCGGAAGAGGCGTCCGCCTTCAAGCACGTGGAGCGCGCCCCGCCCGCCGCCGCCGACGTACCAGGAGTGCGTTACGCGCAGCTGCCCCCGGCAGCCGGGCTGCCCCTCGAGCGCTGCTCGCTGCCACCCCTCGACGCGGGCGGCCTCAAAGGCTACCCGGGTGGCGAGTGCAGCCACCTGCCGGCCGTCATGCCGGCCTTTACCGTCTACAACGGGGAGCTCCTGTACGGCTCACCAGCCGCCGCCGCTTATTACCCGCTCAAACTGCACTTCGGCGGGCTGCTCAAGTATCCGGAGTCCATCTCTTACTTCAGTGGGCCCGCGGCGGCGGCCGCTCTGAGCCCGGCCGAGCTGGGCTCCCTGGCTAGCATTGACCGAGAGATCGCCATGCACACGCAGCAGTTGTCGGAGATGGCAGCCGGGAAAGGCCGCAGCCGCCTGGACGCGGGGACGCTGCCCCCGGCCGTCGTGGCCGCTGGCGGCGCCGGGGGAGGCGGCAGCGGGGGCGGCAGCGGCGCGGGCAAGCCCAAGACGGGTCACCTGTGCCTCTACTGCGGCAAGCTGTACTCGCGCAAGTACGGGCTCAAGATCCACATGCGGACGCACACGGGCTACAAGCCGCTCAAGTGCAAAGTGTGCCTGCGGCCCTTCGGCGACCCCAGCAATCTCAACAAGCACATCCGGCTGCATGCCGAGGGCAACACGCCATACCGCTGCGAGTTCTGCGGCAAGGTGCTGGTGCGCCGCCGGGACCTGGAGCGCCACGTCAAGTCTCGCCACCCCGGCCAGAACCTGCTCCCCAAGGCGTCCGACGGCCCGGGCGCCGAGCCTCACTATCCCCCGGAGCCGGGAGAGCCCAAGAGCGACAACGACAGCGACGTGGACGTCTGCTTCACCGACGACCAGAGCGACCCCGAGGCCGGGGGCGGTGGCGAGCGCGACTAGTAACGTGTCTTTCAGGGAAGGCGGGGAGTGTGGGGGCGTGGACAGAGAGAAGAGGGGCTTCTGCTGTGGGAGAAGAGGAGCTGCTGGTGGTGAGAAAGACCCGGCGGACAAAACCGGTTTGGTTTTGGTCGCCCGCCAGATTTGGAACAGTGAGCGGTCCCAGGTCAGAAGCTGAAAGTCTGAGCAAAGGTTTAGAGGCGTCTTAAAGAAATTTTGCCTTTCGAGCATCCCCAGGGCGGCGGGTTCCAGCACACTCCAGGCCCCTGAGCACCGCGAATAGGCTACCCTTTCGCCAACCCAGGTGGTTGGCTCTCCAGGTTTAAGATCACATGAATGGGAAGCCACAGCGCCCTCGAGGGCGTCGATTTTAACTGCCGCGTATTTTTAAATTGTTCTTTTTTTGTGAAGAAAATTGTGCCTTTTGAAACGACGTTTTTTTGTGTGTATTTTACATTAGCATTTCACTGCATAGGCAAAATAGTAGCCGCAATTCGGTAGATGTGACATCCAAACACTTGTTTCCATTTCATCTGTTCTCGTGTCAAAGACTCCGCCTTGACGCAATGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTGCAATTATTTATAAGAGAATGATGACAAATGTAAAATATCTAAAGCATGAGTCTTGAGAGCACGCAATATATAATTTTAAAGAAAATGCCCTATTTGGTAGAGAACAAATGTGATGTATGTTGTTTTATAATGAATGATGTAAAGTGGATTCAGTATTTTGGTCTTGGTTCCAGTTTGTGCAATCTTTAATAAAAATAAAGATTAAAAACAAGAGTTTGTTCACTTGGCAGGTTCAGCAGATCTTTTAATGAAATAATTTAATTTGAAAGTGGTTTTTGAGGCGACTCCATAATACAATAAATCAGGGGACATGAATACTTTGATTATTCATGAAATAAATTATAAGTACTGTTATAATAGGGAAACATCATTTTCAATACGTGCATTTCACAGGCTCCCAGATAGCAGGCAAAATAATTGTTTGCTGAAACCATTGTTAATCATGCTGTGTTTTCATCTTTATGGAAAGAAGCTAATGACCTTCAAGAAAAAACACACCCACACACAATATTCCTCATCAAAAAGAACTGTGCAACCTTAGAATCACTATTTTTTGTTATGTACCATTTTGACAGAACCTCAAAAGCAAAAAAAGGAAACTTGAATAGTGCTTTTTATGATTCGTACATTTTCATATTCATTCAACAAATATTAAAGAAGGATCTATTTTATTGGAAGGGCTGATCTATTTGTTTTATGTAGGTTCCCAGGTTCCCCCTATCCGAAGTACATCTTTCAACAATCTCCTGCTGTCTGAATGGGTCCCATTTTACAGAAGAGGAAATAATACTCTTCAAGGTCACTACTGGGAGGCCCATAATTAGGCAAACTTGGAGCAGTGACTTTATTTATGGTTATACAAAATTAATGCTAACTAATGGAAGGATATCATAAAGAATATAATTTTGTGGGCTAAAACTGGAAAACACCTTCTCCCCTACCTCCCATTCCTTTCTCCACATGCTCTCTGGGGTTTCACTGCAGTTATGTAGGAAGAGGAGGATTAGTCACACCCCTTGGCTAAGGGTAGGTACCCTAAGAGCCCCGGTCTGCAGCGCTCCTCCCTGAGATTGGCAGGAAAATTCTAGTGGGTCACCAAAGGGTCTTGGATATGACCTTGATGATTTAACTCAGTTAAAAATGTGCTTTATTTTCTGCATCCTAGTACTTTGGCAGTCTTCAACCTGCAGTCTTCCATTTGGGAACGCAGCCTCAATCACTGGGTGGCTGGCAGGGACTTTTTCTAACCCATCACAGCAGGAGGCATGGCTGGGAGATGAAGGGCATATAAGTTCTGCGCGTTGTGATCAG EMBV3_19572 AGTGATGATGGTCAACGGCGATCACAGGATAGGGATTTTTGCTAAGCGAGCCATCCAGAC Gene GeneID:509106|EZH2:XM_002687034:117_cdna Constitutive 1 NULL GeneID:509106 4 GENE EZH2 NULL enhancer of zeste homolog 2 (Drosophila) EMBV3_27643 GGTCTGTAGAAGACTCATCCTTTGTTGCTGGATGGCTGGCTTGTTAATCATAATCCCTCC Gene GeneID:782338|LOC782338:XM_002687592:676_cdna Constitutive 0 NULL GeneID:782338 5 GENE LOC782338 NULL similar to olfactory receptor MOR114-7 EMBV3_25031 AGCCATCACCCCTCCTCCCATCGGATTTCTCCCCAGGGCTCTGCAATAACCAAAATCAAA Gene BVT0102_250087 + 1 EMBV3_15745 GK000024.2:53505215-54044119 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140565 TCONS_00140567 TCONS_00140564 1 XLOC_085155 NonCoding TCONS_00140567 XLOC_085155 NonCoding NonCoding - 24:53610337-53632736 - TSS104884 733 1 TCONS_00140567_2 87 0.410641200545703 3 0.967407804268238 9.28082905261219e-05 0 3.02836833058431e-53 1.13289853242802e-05 1.46089338324171e-05 1.6612650429809e-313 0.00026703230190136 0.000104899541150109 5.29966989438789e-05 3.94397452251643e-05 3.12301721563889e-06 0 0 0 8.03199322562663e-05 3.60321055236989e-05 0 0 0 1.60821023687168e-06 8.28302744069512e-06 0 0 0 0 0.000512708762021886 0 0 1.32458437991841e-05 4.91988980880335e-05 XM_594211.5 LOC516074 PREDICTED: Bos taurus nuclear pore glycoprotein p62-like (LOC516074), mRNA. 5e-28 129 75.13 0.26193724420191 0 noncoding 1 1 1 1 0.0985347348126411 0.704220148574271 -0.029520475634929 0.568556253417971 CCAAAGCAGAAGAGATACTACAGTATGCAAGGGCTGAAAATGGAGAAGGAAGAGTCCTTACCACGCTTAGCCCTGATCTGGCAAGGGAAAGGTGCCATTACCACAGTCCCACGTAGAGTCATGAATTTGAAAGGAATGGTGACTTTTGGCCCAGAGTTGCCGCTATCCTGATGTGAACACTCAGAAAGAGCTGGAAGACAGATGCTCCAGCCATCACCCCTCCTCCCATCGGATTTCTCCCCAGGGCTCTGCAATAACCAAAATCAAAGATAAATGCAGAAGAATAGAAACCAACATTATGCACCCTTCAGTGAGACAATGGGCCAGGAAGGATTACTGGAGTGAAGAAGTGGTTTCAAGGGGTTGACTGTGCTTAAGAAGGACAGCCCCTCCAGCGTCAGCAAGGCCCCAGATATCAAAACATCAGAGCATAGACAATAAAAGACAAGGCTAACGCAGGGAGAAAAAAGATGGCGGGTTGGAGGAAAATTAAGACGAAAGATACAGGGACTTCCCTGGTGATCCAGTGGCCAAGACTCTGCACTCCCAGTGTAGAGGGCCCGGGTTCCATCCCTGGTCAGGGAACTAGAACCTACATGCTGCGATTAAGAGTTCGTATGCCTCAACTAAGGACCTCAGATGTCATGAATAAAAGACCTCGTGTGCTGCAACTGAAGAGCCTGCATGCCTCAACGAAGATCAGAGATCCAGTGTGCCTCAACCAAGACCCAGT TCONS_00139315 TCONS_00139316 TCONS_00139317 TCONS_00139318 TCONS_00139319 TCONS_00139320 TCONS_00139321 TCONS_00139329 TCONS_00139334 r 3' 100823 TCONS_00139315 TCONS_00139316 TCONS_00139317 TCONS_00139318 TCONS_00139319 TCONS_00139320 TCONS_00139321 TCONS_00139329 TCONS_00139334 r 3' 101195 EMBV3_13256 GGGTGCGGTACCTGGAGGAGGAGAACCGAGGGACCTGTTGCAATGAGAGTGGCAAAATTA Variant GeneID:614716|AUH:NM_001105436:111_cdna 270^1002 2 EMBV3_13100 GeneID:614716 8 GENE AUH MGC140404 AU RNA binding protein/enoyl-Coenzyme A hydratase EMBV3_31522 TGCTAATGTACTATGCCTTTACCCCAAACTCTTGTCTCCAAGTCGGTTCCGCCTCTTGGC Gene BVT0101_029980 + 0 NULL GK000027.2:1-45407902 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30646 AGAGGAGCCGCGGGCTAAGCTTCCTGGGAAATAGCCTCAGGAATTCTGGGAACCCAAAAA Gene BVT0102_226113 + 1 EMBV3_33748 GK000019.2:28134583-28147258 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30580 TGCACACCCCTACTGTGCACTGACCAAAGCTTACAACACCTCCGTGACTGAACACAGCTT Gene GeneID:518130|IFLTD1:XM_002687733:58_cdna Constitutive 1 NULL GeneID:518130 5 GENE IFLTD1 NULL intermediate filament tail domain containing 1 EMBV3_30468 GCTACGCCCGGACCGACGGGAAGGTTTTCCAGTTTCTTAATGCAAAATGTGAGTCGGCAT Gene GeneID:784523|LOC784523:XR_084101:14_cdna Constitutive 0 NULL GeneID:784523 28 PSEUDO LOC784523 NULL similar to Rpl24 protein EMBV3_15367 CTTTGGATGAATGTAAGTGACGGACACCTCACGACAGAAAAGACAGGGAAGTATGCTACC Gene BVT0102_023441 + 0 NULL GK000016.2:67890404-68078642 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068109 TCONS_00068102 1 XLOC_041586 NonCoding TCONS_00068102 XLOC_041586 NonCoding NonCoding - 16:67976822-67993298 - TSS51059 1365 1 TCONS_00068102_1 67 0.422710622710623 4 0.917389984825493 0.000558454078201761 0.000624341667659318 0.00027862724325191 0.000503434311415607 0.000585929739024606 0.000358725851634136 0.000645727116558527 0.000789599510986481 0.00143640084712384 1.07793437083019e-144 1.6693331803633e-06 4.33632497882116e-06 0.000141880211571997 1.70469972694254e-202 2.41425575136876e-05 0 0 0 0.00087755861072102 0.00119039645941591 6.46836127385297e-05 0 0 9.31501762333944e-21 0.000200715999359893 0.000825003496503651 0.000507972104682007 1.38627222583019e-144 0 4.00526196306847e-118 NM_001102171.1 FAM105A Bos taurus family with sequence similarity 105, member A (FAM105A), 2e-18 98.7 75.80 0.113553113553114 NM_019018.2 FAM105A Homo sapiens family with sequence similarity 105, member A (FAM105A), mRNA. 4e-20 104 71.81 0.161904761904762 0 noncoding GAGCCACCTGGGAAGCCCATCGGCTGTTACTAGGTTCCGTAATAGGCAGAACAATGTCTCTGAAGATGCCCCTCTTCTAATCCCTGGAACCTGTGAGTGTGTTAAGTTTACATGGCAAAGAAGAATCAAGGGTGCAGATGGAATTAATGTTGACAATCAACTGGCTTTACAATAGGGAGACTAGCCTGGATTATCCAGGTGGAACCAGTGTAATCACCAGAGTGCTGAAAAATGGAGGAGGAGTTAGAAAAAGGGAAAGTCAAAGGAAGACGTGTCAAGGGAAGAACGGTCAGAGAAATGCAGTGTTGCTGGCTTTGATAATGGAAGAAAGATGCCTCTGAAAACTGGGGAAACCAAGAAATGGATTCTTCCGTGGAGTCCCCAGAAAGGAATGCACACTTGTTGATACCTTGATTTTAGAACTCCTGACTTCTAGAACTTGTTTTACACAGTAGAGGAAACCTATGGCATTTTGATTGAAAAGCTTAAGATTCACTGGTCTGGGATTCCAGCCTGAGAGTCAGAAGAATGGTATTTTTTGTTTGTTTGTTTGAAATTCCAAATGTCTGACTTAAGATGTAAGACTGAAGCTTAGAGAAGAATCAGCAACTGAAGTCTTAAACAGAGCAACTGAAGCCAGAAACAGAGCTGGGACTTAAATCCAGATCAGTCTGGCTCTAAGGAGTGTATTCCTTATCATCTGCCATACTGCCTGTGAGATGCCTGTGGGACCATCTTGGAGAGATGCCCAATAGGCAGCAGAAAATAAGTCTGGAATCCAAGATTAGGTATGAATGTGGCCATTGAGTTGAACTGAAGACAAAGGGAATGACTTGTCACTTTGGATGAATGTAAGTGACGGATACCTCACGACAGAAAAGACAGGGAAGTATGCTACCATAATTGATGTCGAGGTCCAGGAACATATTAGTCATCCGTTATGGTTGAGTTGTTACTGTTTCCAATCAGGTGACCCACTCTGAGACAAGTGTGACAGATAAGAATGTTTTATTTATAGTTTTCCATACATTGTAGCTGCCTTCTACATGTTGAACCCTTTAATGATCCTCCAAACCACCTTCTCTCTTTTGGGAATAATACTGTGTGAAAATACTTGAATCTGGACTAGCACTCACTGGGCACCAGTGCTATATAGGGAAAAAAAAAAAAAAATCAACATCAGAGTCCTGTCTGCTGAAAGCTCAGACCCTATCCCCAGCTGGGATCAGGGCTCTGTACCCTTGATCTTAAGATGAATAAAGTAAAGTGTGAAAATAAAGAATGTATCTTTTATCTGGTTATGTTCTGTTACTTTAAAATAAGTTAAGTCTTGAATGTCAGTGAAGTCCTGTGACTTTTTCAGCC TCONS_00068115 s 5' 63488 TCONS_00068115 s 5' 79963 EMBV3_05350 GCACCCAAAATGTGACGGCCTGTGACTCTCCTATTTAACTCTTCAAAGGTTTAGACCCTG Gene GeneID:514557|OAF:XM_002693029:254_cdna Constitutive 0 NULL GeneID:514557 15 GENE OAF NULL OAF homolog (Drosophila) EMBV3_09798 CACAGCCCTGCAGCTGGGGGCAGAGTTCAGATTTATTATCTAGGATAGATTTGGATGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19499 TTTTTGTCAATGTGGCTGGTAGCTCAAACCCGTTCCTCAGCCGCCTCCTTAACCGTGACA Gene GeneID:326334|CA11:NM_175717:86_cdna Constitutive 0 NULL GeneID:326334 18 GENE CA11 CAR-XI CAR11 MGC143020 carbonic anhydrase XI EMBV3_40139 TCGCCCTAAGTTTGCGGCGCTCCTCCAACCCTGCTACTTGGAGTTGCTTTCAAACTAGTT Gene GeneID:100337133|LOC100337133:XM_002689258:169_cdna Constitutive 0 NULL GeneID:100337133 7 GENE LOC100337133 NULL protocadherin gamma subfamily B, 3-like EMBV3_21185 CTGATGCTGACAGGTCTTGTAACCCACCGTGTAGTCAACCCCACTCATACTGTAGCGAGA Gene GeneID:782187|THSD7A:XM_002686693:122_cdna Constitutive 0 NULL GeneID:782187 4 GENE THSD7A NULL thrombospondin, type I, domain containing 7A EMBV3_08429 CATGTCCCTGGGTTTTCAGTATGAACCTAAATGCCTTCCCTACCCACACTCCTCACATGG Gene GeneID:281749|EDNRA:NM_174308:56_cdna UTR3_Alt 2 NULL GeneID:281749 17 GENE EDNRA NULL endothelin receptor type A EMBV3_24896 TGGAAACCACCACGCTCTTTCCACACGTTTGTTTCAATCAGCCTTAGGTCCTTCGTTCTC Gene BVT0102_044441 + 0 NULL GK000025.2:34861036-34884278 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147002 TCONS_00147003 1 XLOC_089264 Coding TCONS_00147002 XLOC_089264 Coding Coding YWHAG 25:34881802-34906758 = TSS109784 4013 1 TCONS_00147002_1 247 2 0.839270687237027 0.00923753667298479 0.00292900531172359 0.00478398851415014 0.00520951727606793 0.0023110308660844 0.00265925097669376 0.00493537294879499 0.00258869180624031 0.00534099471575372 0.000230507850065732 7.51785098239188e-09 9.21514253289279e-05 0.000521819994545145 0.00208810878884069 0.00240796311646229 0.00597121461206902 0.0122643726143045 0.0181163526854214 0.00660998839278052 0.0127186577256416 0.00683204095033691 0.000726026728723966 0.00485775783881607 0.0113285944039173 0.00962037200754674 0.0106459107055546 0.0022547588478968 0.000908112819410054 0.000323422595285905 0.000154894285573829 NM_174793.2 YWHAG Bos taurus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide (YWHAG), mRNA. 0.0 2558 100.00 0.353102417144281 NM_012479.3 YWHAG Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide (YWHAG), mRNA. 0.0 3999 83.52 0.92225267879392 TCONS_00147002_1 sp|P61981|1433G_HUMAN 1433G_HUMAN 14-3-3 protein gamma; 0.0 509 100.00 0.995951417004049 1 coding 0 0 0 0 1.13710057646843 0.172508350075052 -0.171915178526152 0.152969352699862 GGCGGGGCCGGGGCGGAGGCCGCGCGCGGGCTGGTGGGCGGGGCCGGCTGCGTCACGCGGCGTGGGCGGGGCCGTAGGGGGTTGTCCGCCCGCGGCACGCACAGCCGCCGCAGCCGCCTCGCGCCCGGTCCCGCGGTCGCAGCTCGAGTCGCAGCCTCCGCGCCCGTCGCCTCGAGCCGCTCGCGTCTCGTGTGGGTCGGTCCCTCCGGCACACGGGCTCCAGCCGCGCCGCAGCCGCCCTCCGAGCCTTCCAGGCCGCCCCGGATCATCCTCGTCCGGCCCGACTCAGCCCGTGAAGATGGTGGACCGCGAGCAACTGGTGCAGAAAGCCCGGCTGGCGGAGCAGGCGGAGCGCTACGACGACATGGCCGCGGCCATGAAGAACGTGACGGAGCTGAATGAGCCACTGTCCAATGAAGAAAGAAACCTTCTCTCTGTGGCCTACAAGAATGTAGTCGGGGCACGCCGTTCTTCCTGGAGGGTTATCAGTAGCATCGAGCAGAAGACATCTGCCGACGGTAACGAGAAGAAAATAGAGATGGTCCGTGCTTACCGTGAAAAAATAGAGAAGGAGTTGGAGGCCGTATGTCAGGATGTGCTGAGCCTGCTGGATAACTACCTGATCAAGAATTGCAGCGAGACCCAGTATGAGAGCAAAGTGTTTTACCTGAAGATGAAAGGGGACTATTACCGCTACCTGGCCGAAGTCGCCACCGGCGAGAAGAGGGCGACCGTCGTGGAGTCATCTGAGAAGGCCTACAGCGAAGCCCACGAGATCAGCAAGGAGCACATGCAGCCCACTCACCCCATTAGATTAGGCCTGGCCCTTAACTACTCCGTCTTCTACTACGAGATCCAGAACGCCCCGGAGCAAGCCTGCCACTTGGCCAAGACCGCCTTCGACGATGCCATCGCCGAGCTTGACACCCTCAACGAGGACTCCTACAAGGACTCCACGCTGATCATGCAGCTGCTCCGTGACAACCTCACGCTCTGGACGAGCGACCAGCAAGACGACGACGGCGGCGAAGGCAACAATTAAGGCCCCCAGGTGGACTGGCAGCGCACGCTGATGCTACTACTGCAGTCTTTATTTTTTTCCCATGAGTCGGGGGTCGGGTGGGGGAGGGAAAGGGAGGGATGACCTTCCTAGGGAGAAACCCACGACCTGTCCTGTCTTTGATCGCCTCTTTTGACATTTTTGCCAAAATACCACTAGTGGAAAGTCAGGCTAGCTGTGCTGGTTTTGGAATAGCAGCCTCACACTGGCACATGGACTGTTCTGTAGATTAATGCAAGTGGAGCTGTCTTTAATTTAACTTATTGCTAGAAAATAGGGTTTTAAGATGAAAAGAAAACTTAAAATGGAATGGCCCTCATTCAGTAAGTTCTGTGGTTCCAGTAAGGATTTTTATGTACATATGCTCTCGTCTTTTAAGTTTTGGGTACTTCCTAGCTCATCTGTTTTAGCTGTGCATTTTGTTTTTCAGGGTGTACTCTTAGCAGACATGGAATATTAAATCCCAAGCTGATAGAACGTAAGGTCTGTTTATGGTTTAGGCCATGCCAGTTTTCAGATTAGTTGACAGTATTAACACTAAATTGCAGTTTACAGTATTTCTACATTACAGCCATATGTTAACATCAAGCCATTGATTGTGTGTTTTTCTTTATTTTGGCTCTTAACATCCTTGTTCAGCCTTATCCAGGTCGGTTTTGCTGTTCTCTGTCTCCTAGGCCAACAGGCTTGCCTGAGGAGAATCAGAACTACTTGTTAGGTTTTGGTTAATAGGTGCTTGGCAGGTGGCTGTGGGATTTTTGTCCTTCTTTCTTCTTAAATCCACCACAACAAACGATTAATCACTTTAATAGAAGCATTGAACACCACAAAACTAGAGAAAATTCAGGTCTGTATGTCATTTATCATGCTGATATTTCCAGAGAAATGCTGGGTTTTTTTCAGTTGCCACAGCTTCCTCGGGTGGCACTGCCGTCTGTCTCCTCTCTTGGGTCTTCCTCATTGTACCTCGTTCCCACAGCATGCACACGGATGGGTTGAAAAGCTGTTGGGTTGTAGAAGCTGGCGGTCATTTTGAGAAGGTTCGTGGTGCAGTGTGTGAAAATTCAGGTGCTAGGAGCTTACTGGTAGAAAAATCCTGAAGGAAGAGCTCTCTCCATGAACATTCTGTCCAGTTTTGGGAACCTCGTGTATCTGTTTTTCCTCCGTGAAAACACTCCTTCCCCAAAGAATTGTTGTAGGAAAATAGCATCATTATCAGATAATAAATCCTCAACTCCTATTTGACCACAATTTTTTCTAATTTTTTCCTTTTAATGAAAATATAGAAGTTGGAGATTGGATTGTGCCATCTTGGCACGTTTTAGAATCGATGGAAACCACCACGCTCTTTCCACACGTTTGTTTCAATCAGCCTTAGGTCCTTCGTTCTCATTTTGGATAAGTCTTTCTGAAAACACGACCTGTTGCATGTGCGTTCAGCCTTTTTTACAAGTAATAGCATGAACTGCTGAGATAGGTAACAACACCAGATTTGTTTGTTTCTTTGTTTTATTTAGGCAGGCAGAGGAATGAGTCATAATTGAGGAAAAACCTGACAGTTGCTTTTGTTAAAACCAGAATGGAGCTTCCAGTTGTGAAATGCACAGTGCCCAGGGTCCAGGTGACAGTGAAGACAGAAGAGTGACGATGCCATCACGTGGCACAGTCTACCCAGCATGACTTTCCTTAGAAGGCCCCCTCCATGTGCTCTGGAGCGAGTCCCAATTAACCGAGCCTACCAGAAGAACTAAGAGAAGAGAGCTTTATAGCTTCTGCGCCCTAGCAGGGGCCTAAGGTCAATGCCATGGATGGGAAGAGATTGGGGCGGGCGGGGGGGTAGGTGGGACTTTCCTTAATTCTATCTTCATGTCCAGTGAGCAGTGCTGTGTCCTTCCCTTGTAGCATTTGGGAATGATTTACTGGAATTACAAAACCTATTTTCCTTTTAAATTTCAGCTTTGGCTCTGGCTGCTTTTTAGAATAATGCAAGATAAAAACCACATCTGAGGGCTAAAAAAAAAATGAAGAGGGAATAGGAGACTTGATATTTAAGCAGCTTGAATGGTTTCTTTTCTTTTCTTTATTTTTAAAGAAATGCACTTGCCTATGATACTGTCTCTCCAGTGAAATGATTACTCCTCCATTACTCTATTGATACAATATTGTGCATGCTAGTGTTGTATTTCTATACAGTAGCTTGAAATTTATTAACTTATACTGTAGGTGTTATGTATTCCTATGACAAAAAAAAATTAAGTCTTCAAATTTTTTAAAGTTTTTTTAATTTAATTTTTTCCTTTTGGGGGTAAAGTTTGCTCTACCAAATAGTGATCGTAACAAATTGATCTGTTTTGGATGTTGCTATAGTGACATGCAGTTATACATTTTGTTTTTTTGGGGGGGAGCAAAAGAAACACCAGTGTTAGCTTAATCTTAATGTCTGGTGTTTGTCATGGTGAAATTATAACTATTACAGTGTAGGAGAACACTGAATATGTTCTCTGAATGAGCCTTTGTGCTTTTTGTCATGTTATGCAGTGAACTATTTTTAAGGTCTAATCAGTGGTTCTTTTTTTCCAACTCCGTGTTTCTCTAAGGAATTCTTTCACACACGGACCATTCTTAGCAGTTTTCCTCAGTGATGGAATATCATGAATGTGAGTCATTATGTAGCTGTCGTACATTGAGCAAATAAACTTACAGATCTGATGTCAGTGCTGCTTAGTTTTATTTAACGAGTTGAAATTTTCCTTTGCTTTCGAAGGTTTGATTGGACCTGGTGTTTTTTCCCCCCTTCACCACTCAAAGAAGGTGGTTGGATGGGGGGAGGGGCAAAACTGTATTTTGGAAAGTGCCTCTGTCTGGGAATCAGGCCTGGGTTTACTGACCTCGAAAAAGGATTGCACATTTTGGGGCTCCATCGTTTCTCTTAGGAAATGAACCCTTAATTTAA EMBV3_13285 TATGTGGGCATATGGGTTCTTGACGAGCGTCTCATGGGGGTCCATGGCCCTGCCTGGCAA Gene GeneID:100299302|LOC100299302:XM_002691682:97_cdna Constitutive 0 NULL GeneID:100299302 11 GENE LOC100299302 NULL hypothetical protein LOC100299302 EMBV3_42141 TGATCTACATCGCCCGCAACGCCAAGGATGTGGCCGTCTCCTATTACCACTTCTATCGCA Gene GeneID:282485|SULT1A1:NM_177521:227_cdna Constitutive 1 NULL GeneID:282485 25 GENE SULT1A1 MGC127219 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 EMBV3_28152 GTAAAGAAGTTGTCAGCCGAGGAGATGACTATTAAACTTAGTCCAAAGCCACCGCAACAC Gene GeneID:404150|METAP2:NM_001040493:22_cdna Constitutive 1 NULL GeneID:404150 5 GENE METAP2 MGC127390 methionyl aminopeptidase 2 EMBV3_34618 CAGCCTGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTG Gene GeneID:537533|DGKH:XM_002691824:508_cdna Constitutive 0 NULL GeneID:537533 12 GENE DGKH NULL diacylglycerol kinase, eta EMBV3_30298 ACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTTTCCTACTTCCTGCCCCAGAAA Gene GeneID:534628|NMRAL1:NM_001076032:231_cdna Constitutive 1 NULL GeneID:534628 25 GENE NMRAL1 MGC140806 NmrA-like family domain containing 1 EMBV3_38547 AGACCGAATTGAAATCTTTCCCTCGCGAATACTAAAATGTTGATGGGTGAAGTGATGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31151 AAGGGGTCATGTGGCTGTTGAGGGGGCTTAGTGATACATGACTCAGAGAGAGGCAAACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14682 TTTCCAATTCCGGCTTTTGTTTGAATCAGTGAGGGTAGCCCGAGGAGGCCAAAGTCTCTG Gene BVT0102_038896 - 1 EMBV3_08503 GK000002.2:91227106-91370423 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00110788 1 XLOC_066690 NonCoding TCONS_00110788 XLOC_066690 NonCoding NonCoding - 2:91278517-91280388 - TSS82409 1871 2 TCONS_00110788_3 65 0.103687867450561 1 0 0 8.05592455741292e-05 0 0 0 0 0 0 4.21707402857751e-06 0 0 4.96887266344397e-05 3.83390758861886e-05 2.5141637964898e-06 0.00026746782977483 4.23488702626416e-05 0.000727625630452513 2.68208293088235e-05 0 0 0 0.000174510652637607 0 3.58410533122774e-05 0 0 0 0 7.78399679851989e-06 0 NM_001103235.1 MPP3 Bos taurus membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) (MPP3), mRNA. 3e-48 197 84.86 0.0972741849278461 0 noncoding 0 0 0 0 -0.00680711159714814 0.948671757819243 -0.00122491990247714 0.985790880163263 AAGGGTACACTGTTTCTTAGGAGAATTTTTATGCAAGTAAAAAGAGTAATCAAATACTTAATCCTAATTTTAGAAAGTAAAACAGTATACTACCACTGTCTACACCTCTAACGTGCTTACTTCCTGTTACTCGGAGTGCTCAATCTTATTTATTTCTTGAAAATCAAATGGTAAAACAATTTTGGGTCTTTGGGCAATATATATATATATACACACACACACACATACATATATACATATACACAGATATACATACACACATATACGGCGTTGTGCTCAGCTGTGTCTGATTCTTTGCGACTCCATGGACTCTAGGCCACGAGGCTCCTCTGTCCATGGAATTTTCCAGGCAAGAATACTGGGTTGGGTTGCCATTTTCCTCCTCCAGAGGATCTTTCCGACCCAAGGATCAAATCCTCCTCTCCTGCTTTGGCAGGCAGATTCTTCAGCACTGAGCCCCTGGGAAGCCACGCGTGCGCACGCGCACACACATGCACCATAAAGCTCGTGAATCAAAGCCTTTGCTCCTTTTTTTTCTTCTCTGTTTAGAGGATTTTACTACCAAAAAACCTCTCCGCCTTAAGGGTAAACAGTATAAAAATATTTCCACTAAAAAGGGTCTGAGAATTCTGAGCTGGGATTACCACAACCCCTAATTATATAAGATACTTAGTATGATAACACCAACTAGTGTAAGGAATGTGCAGATTTATTTACATCAAGTTCAGATAAAGAGATAAAAGGGGACTTGAATAAGCAAGCAAAGATTAGGACTTCAGGAGTGTATATTTGAAGGTATCTTTGGAACTGCCCCTCAGCTACAATGAAAGACCAGTAAAACCAGCCTTCAGAATAACCCTTCTGCTTAGTAGGAGAAGGGAAGGCTAGAATTCACCTCTAAGATCGCCCTCCCACGCAGATTTTCCACCTAGCAGCTAAGAATTAAACCCAGACTTCCGATCATGGCGCCACGCACGTCACCTTCTCCCTCTTCGCCTAGCAAAATCCCACCCAAGTCGACCAGATCCTGCAGGAGTGTGTAGAAGCTGGAGGGCGGGGGGAGAATTCCCTTGCACAATCCTGGTAGCTTGGGGTTTTGCAATTCAAAAAACCCTGCTAAATAGATCCGAGCCCGATTCAAAGGAGGCTTAGATACCAGCAAGACCTGCTCTTTCCCTTGGGTGCGTAGACTCGACCCCACTCTTTACCCTGAGAGGCTACTCTTTACCCTGAGAGGCTACTCCTCACCGCAAATTTCCTTTCAAATGCCTTAGGGGCTTCCAAGGCTCCCAGCCTTTGTGAATAAAGGCCCACCCTCGAAGTGGAAACCTCGCTGCATAAGAAATATGCACAGACAGCAGGACAGCGAACAGAATTGCAAAAGAACGAGTTCTTTCTAGCTTTGCATCTTTTCGAATGTTCAATATTCCTGTTAGCCAAGAAGGGTTCCGGTTATGGGTACTTGAGGGAAGCAGGCCACCGATTAGAGCAAAAAACATCAATACAGGGGTGGTCTTTCCAATTCCGGCTTTTGTTTGAATCAGTGAGGGTAGCCCGAGGAGGCCAAAGTCTCTGGTTCTGGGAAAGGCGGGTCCGTCCCGATTCTTTTAGCTGCGGAGAGGCAGGCGCCGGCCCCAAGAAACAAAGGGGGTAGTTCTGCCCCTCCAGGCTTTTACTCCAGGAGTCCCAGAGGAGTCAGAGGCTAAATCACAGAGCTCGGAAGAGTTTGCCAAAGGTTGGACAACAGACGCGGCTGCCCTCTCTTAAGCACACAAATCCCACGCGTGCCCGTCTAGAAGGTATGTGAGCGTCAAGGAGAAAGGCCATTGCTGCCCATCGCGGGCGGCCAGCCCCGCCCTACTCTCGGTGGC TCONS_00102939 TCONS_00102940 . 5' 125 TCONS_00102939 TCONS_00102940 . 5' 125 EMBV3_14568 CAGAGGTGTGGCTGCAGATGGTGTGGCTGGCATTTCCTTTTGAGTCATGATGACAGATGG Gene GeneID:281270|HOPX:NM_174097:80_cdna Constitutive 0 NULL GeneID:281270 6 GENE HOPX HOP LAGY HOP homeobox EMBV3_29036 AGAGATCACGGCCTCCTCTCCCAGCCACCCTGCCAACTCTTTCTACTACCCGAGGCTGAA Gene GeneID:513844|SPON2:NM_001046157:2_cdna Constitutive 0 NULL GeneID:513844 6 GENE SPON2 MGC138085 spondin 2, extracellular matrix protein EMBV3_40979 TTGAGCCCCTATTATGGCTGTGGTTATGGAACCAGATATGGCTGTGGATATGGGACTGGC Gene GeneID:785105|LOC785105:XM_002684621:109_cdna Constitutive 0 NULL GeneID:785105 1 GENE LOC785105 NULL hypothetical LOC785105 EMBV3_07783 TCAGCCAGCTGGAGGAGTTTGGGCGGCAGAAAAAGTGGCTCAAGCGGCAGAACAAACACC Gene GeneID:787081|LOC787081:XM_002686409:349_cdna Constitutive 0 NULL GeneID:787081 3 GENE LOC787081 NULL similar to C05G5.5 EMBV3_06997 TGGTTGAACTCAAAAAAGTAGTTCTAATACTTGGGATCTCATCTAGCCTGGTAATCCCAC Gene GeneID:507828|SFRS6:NM_001035272:934_cdna UTR3_Alt 3 NULL GeneID:507828 13 GENE SFRS6 MGC128807 splicing factor, arginine/serine-rich 6 EMBV3_27827 AGGTGTCAAATCAGACCGTGACCATGACCATCACACTTCTGGAAGACTTCCCACTAAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06390 CCAAGGACAAGCTCGAGGAAGCCAAGAAGAATAATGGGCTCTCAGAGTAATGTCTTAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36055 GTGAGATGAGTTTTATGGCCCCAAAGTCTATAGTTGAGAATGATCTATGGAGTTTAGGAA Gene BVV0102_168008 - 1 EMBV3_35600 GK000001.2:38724394-40547023 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32883 GCTTGGCAGATGTGTGAGTGATGGTTGTGTAGCTAGTGTGTAGCTTTTGAGTTGGGATGG Gene GeneID:781188|MRAP2:NM_001099393:5_cdna Constitutive 0 NULL GeneID:781188 9 GENE MRAP2 C9H6ORF117 melanocortin 2 receptor accessory protein 2 EMBV3_34119 AGCCATTTCAACAATCCAGGAGAGGCGGTCGTTTGGAAACTCGGCTTCTCCTCTTCCCTC Gene BVT0102_144572 + 0 NULL GK000002.2:129723905-129743820 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106842 TCONS_00106843 1 XLOC_062902 Coding TCONS_00106843 XLOC_062902 Coding Coding RPL11 2:129736343-129906164 o TSS78550 3430 1 TCONS_00106843_2 177 4 0.979825697797668 1.97957929644632e-05 0.000169887916186892 5.39339749981425e-05 1.18751536434708e-06 2.7335046114868e-05 3.33623199805578e-05 3.8239023819682e-05 5.66118811300643e-09 8.85412477718763e-05 0.000539837634970841 0.000707433785436745 0.00043087791485951 0.000900650767530327 0.001172095695591 0.000350549735215048 0.00528029631266834 0.00252902657415803 0.00234404542061724 0.000119147718088526 0.000211740127376416 1.76185756474236e-06 0.00150322577645546 0.00187807335141919 0.00275789780685678 0.000100979684279445 0.000110900183833784 2.70938333132676e-09 0.000344142888814635 8.23899331123739e-06 0.000574896527121041 XM_005203277.1 SIII PREDICTED: Bos taurus transcription elongation factor B (SIII), 0.0 4702 100.00 0.759766763848396 NM_003198.2 SIII Homo sapiens transcription elongation factor B (SIII), polypeptide 0.0 1514 72.47 0.756851311953353 TCONS_00106843_2 sp|Q14241|ELOA1_HUMAN ELOA1_HUMAN Transcription elongation factor B polypeptide 3; 1e-76 247 95.73 0.655367231638418 1 coding GGCTTCCTTCCCTAAAGGTGAGGAGGCAGATTCGGATGATGAATTCGAGAAACCCACCATGTCTTTTGAGTCATACCTCAGCTATGACCAGCCCCGGAAGAAAAAGAAAAAGATTGTGAAAACTTCAACCACGACTCCTGGAGAAAAAGGACTTTAAAAAATGATTCAAAAAGCACTAGTAAAAACTTGGGCTCAGTTCACAAATTACCTAAGGTGAATGAAAACAAGCCTGGGAAGCTTCCGCCAGTTGGAGCCGACTCAGCCAAGCTGAAAAAGGTCCCCAGCGATGTGTTGCCAGTATTACCTGACCGCCCATTACCTGTGATCCAGGCCAATTACTGTCCACTTCCTTCCCCTGAATTGATGTCATCTTTCCAACCAAAGCGAAAAGCACTCCTCTCACCCCAGGAAGAGGAAGAAGCTGGATTCACCGGAAGAAGAATGAATTCTAAGATGCAGGTCTATTCTGGTTCCAAGTGTGCCTATCTCCCCAAAATGATGACCTTGCACGAGCAGTGCATCCGGGTGCTTAAAAACAACATCGACTCGATCTTTGAAGTGGGAGGCGTCCCATATTCTGTCCTTGAACCTGTTTTGGAGAGGTGCACACCTGATCAGTTGTATCGAATAGAAGAGTACAATCACGTATTAATTGAAGAAACGGATCAATTATGGAAAGTTCACTGTCACCGAGACTTCAAGGATGAAAGGCCGAAGAGTACGAGTCATGGCGGGAGACGTACCTGCGGCTTCAGGATGCACGAGAGCAGTGGCTGCCAGTCCTCACAAAGAACATCCGGTCTGCACACGCCAATAAGCCCAAAGGATCAAGCCAGCGCCGTACCCCACAGGAAGCAGCCGGGCTTCCTTCAGCAGCGGCAGCAGCAACAGCTTTAACGCCAGCCCCGAGGAGCCGGCCTACGACGGCCCGAGCACCAGTGGCGCCCACCCAGCTCCAGTGGTCAGCAGCACCGTTTCCTACGATCCTAGGAAACCAGCCGTGAAGAAAATTGCCCCAATGATGGCCAAGACGATTAAAGCTTTCAAGAACAGGTTCTCCCGACGATAAATCGAGGACTTACCTTGGAAATGAAATCTGGGGGGAGGAATACAAGGACGGTGGGGGTTGGGGAATGGAACTTCCACAGGAGACCAGAGCCTTTCACTCTGTGGAAGCTTTTGGTCCCCGAGTCCTGCGCCGTCAGCGGGCGTGTGCCCGAGCCGGTGTCCGCAGCCGCTGCCTCCTTGCCTGGCGAGCACTTCAGAGTTCTGAAGACGTGAAGCTTCGCTCTCACCGAGGATTTTAAGGTCGATTGTACCTTTGTTGTTAATTAGCTTCTTTGTAAACTATAAGACATAGTTTTAATTAATAAATATTGCCCCCAGATTGTATTTATATTACCTCCCCCTGCCCCCAATTTTTCTGTTCTGTTCTGTTTTGGTCCTCTCCCACACACTTAGCCTTTTATTTTCAGGGCTCTTTGTTAGAAGCCTAGTGGAAGTCTTTCTCCTGTCCCGGTTCATCTCTCCTGAGCGGACTCTGGTCCGGAGAGAGGACTGCGTGTCCCCGGAGCCTGTGCGGGGCACGCTGCGCTGCGGGTTGCCTGTGCTGGAAGGGGAGCCTGGCCTGGAGACTGGCGTGTTCAGGGCGGCCCCCTCCCTCTGGGAACCCGTCTCAGTGTCACGCTGCGGTCCTGCACAGGTGCATCTCTTCCCTACTCATCACATAGTATTTATTAAGGGACGTTCTAGAGTCTTCCCCCCGCCCCACCATTCTTTTTGCCAGGTCCCACTTCTTTTGAGGCTTAACTTGAGGACACAGAACCCCAGTATTTTTACAGTTTCCAGTTTCTAATTCAAAACTTGGGGCTCCTTTTCCTCCCTGACTTTTCCCTCTCCCCACTGGCATGGGGCAGAAGACAAACACCTGGAGGGGCTTTTTGTAGGCCCCCAATGCAACTTAAAAACCAGCACTTTAATCTCTTACTCCCTGTGAATCGCTGAATGGTTTTAAAAAGTAATGCTATGTTGGAAATCGGTTTTGTTTTTGCCTTTCTTTAAGATCATGTGATTGAAAGAGCACAATTTGCTATGTTTTGTAGAGAACTCTGCAGCTTGAAACTCTCTCTACCTTTGAGTTTTTAAGCCAGAATTTGTAGGAAAGGACCAGTTTAAGGAAAGGGTTTGAGCCACAGGGGCATCCACAGGTTTGGAAGGGAGAATCTCACTTTGGAGTTGACATAGGACGAAAGATTAGAACTAGGAGGACAGCATCAGTGTTCTTGGCTGTTGAAGGGCAGTGACCTAGTAGGAACCCCCTTAGTCATGACCCTGGTAGAAGTAGATACTATAAATTGGAGATGCCCATCCTTTAGAAATCTGAGAAGCAGATTGAGGGTGTGGTTAGTGTGGCAGCCCATGGAGCTTGGCAGTTGGTAGTCCCTTTGACAAGGTCACTCAAAGCTCACAGTATGGAGCCCACTGTTTTTAACCATCCTGTAGACCTCAGGCTAATTCTGAAGATTGCAGAGCAACACAGCAAGAAGTCTGTGCAGCAAAAGCTGCGTTGTTCAGTGTGCATTGCTGTGCAAGGTGCCTGAGGGACGCAAGTATTGCTGTGTTTTAATTTGCTGTATTTTTGAACTGGGTAAAAGCATTCTTTCTCTTGATCATATGTATTACCATTCCACCAGTCCCCCAGCCCGCTCCCCAAATGTGATACTAGGAAGCCTCTTCTCTAAAACCACATGAGCACCTGGGACAGCTTCCTCTCGGTGTCCACACCTTGAATTTGTCTCTTTACCTGTGTGTTGAAGTCTCTGCCACTGAAACCAGTTTTCCATATTTGATTCAGTTGTGTGTGATTTAATTTCCTTCATTAGGAGTCTTTGAGCAGGGAGGGAATAAAAGACACACCCCAGCATCACTCCCCATCTTTGGATCACCCGTTTACATAGAGCCAGATCTTCCTCCCGCCCCCTCTAAGAGTGTCTGCATCAGGGTATGACTTGGTGGGAAGGGTGAGGGAAGAGGAGAAGCCGAGTTTCCAAACGACCGCCTCTCCTGGATTGTAGAAATGGCTGCAGAGCAGACACAGGTTGATGTTGAACCTTTGGTCTCATTTGTGAAAACTTGTGCAATTCCTTTTTTCTGTGCTACACTACACACAAATCACCAAATTGCAAATTAACCCATTGTGATCCTTGGTGTAATGAACAGTTTCTTTGGGGCTTTTTCTTTCTTTCCGGGAAGTGGGAGGGAAAGGAGCAAGGTATTATCTTGCTCTTCATTTGTATTTTGGTCCCAAAATGTAAATACGATTTTCTATGTTACTTTTTTGTGGTAACTACCAAGATGAATATTTTAATTAGATAAGTTATATGAAAAGAAAGGAAAATTCCATGTCTAAATAAAAAAAAAACAATACCCA TCONS_00106844 TCONS_00106845 TCONS_00106846 s 3' 5055 TCONS_00106844 TCONS_00106845 TCONS_00106846 s 3' 2968 EMBV3_32071 CTACCGGGCCCCAAGCCATGACAAGGTGGTCTCTATCTTCTACACAGTCCTTACTCCTAT Gene GeneID:509071|LOC509071:XM_002689052:20_cdna Constitutive 0 NULL GeneID:509071 7 GENE LOC509071 NULL similar to olfactory receptor, family 2, subfamily V, member 2 EMBV3_15445 ACGGGGGTCGCTACAGGACGGTGCACACTGGCTGCTAAGCAGAGAATCTCCTTCAGGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11975 AATTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAAGCCCAGTATTTTGGGATTGCC Gene GeneID:407128|BMPR1B:NM_001105328:2_cdna Constitutive 2 NULL GeneID:407128 6 GENE BMPR1B ALK6 BMP15 BMPR-IB BMPRIB bone morphogenetic protein receptor, type IB EMBV3_13772 GATACTGCTGACCGAAGCGAACTGCTGTACAGTTGTAATTCGTCATGTAATTGAAGACTG Gene GeneID:536154|NCK1:NM_001076072:60_cdna Constitutive 0 NULL GeneID:536154 1 GENE NCK1 MGC139414 NCK adaptor protein 1 EMBV3_22729 ACTCATCTTCTACTCGATGGCCTTCATGCGCTTCGCCTACCGTGTACAGCCTCGCAATTT Gene GeneID:520682|LOC520682:NM_001075809:34_cdna Constitutive 0 NULL GeneID:520682 X GENE LOC520682 NULL brain protein 44-like protein 2 EMBV3_23891 CAGGCGAGCGTCACGCTGAGGTCGGTTTCCCCGTATCCAGCTCCGGGGACCCGTCCGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22832 CAAGACCTCGAGAAATGCTCCTGAAGAGAAGGCGTCTGTAGGACCCTGGTTATTGGCTCT Gene GeneID:528100|SERP1:NM_001114083:38_cdna Constitutive 1 NULL GeneID:528100 1 GENE SERP1 MGC128678 stress-associated endoplasmic reticulum protein 1 EMBV3_31148 TGAGCTGGAAGGAGAGGTAGAGAGTGAGCAGAAGCGCAATGTGGAAGCTGTCAAGGGTCT Gene GeneID:788772|MYH2:NM_001166227:126_cdna Constitutive 0 NULL GeneID:788772 19 GENE MYH2 MyHC-2a myosin, heavy chain 2, skeletal muscle, adult EMBV3_14664 GAAGTGCTTGACATCACAGAGGAAACTCTGCCCCGCTGCTGCCCCTGCTGCCACCACCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31660 CAAGAGGTGAGCAATCCAAGTAGCAGGCAGTTATGCTTTCACATCTGGCCTCTGTCTCTG Gene BVT0102_343202 + 0 NULL GK000018.2:43342667-43351262 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083285 TCONS_00083283 TCONS_00083284 1 XLOC_051221 Coding TCONS_00083283 XLOC_051221 Coding Coding NUDT19 18:43336311-43344907 = TSS62625 3791 1 TCONS_00083283_2 381 0.317858084938011 3 0.559278650378127 3.58893827111152e-06 1.66732851716228e-23 9.51092742086821e-59 2.53215412371725e-63 0 6.2401157473881e-17 3.99495449731222e-21 1.29714870792647e-11 2.65940746141717e-30 2.0618586084419e-05 1.456978224358e-72 8.61875108009579e-12 4.25543849780856e-33 1.73222112907472e-11 6.04474827591153e-45 0.00121602599483418 7.80834757473852e-05 0.00028439193967322 1.94669007448765e-78 3.65607468461849e-24 7.29268628551295e-25 7.33196803654672e-05 0.000287374649264961 0.00113282035232258 0 2.56337601372496e-60 2.90685668428468e-13 6.41167923644495e-07 1.47677156600112e-05 0.000117279163760822 XM_869438.6 LOC617221 PREDICTED: Bos taurus nudix (nucleoside diphosphate linked moiety X)-type motif 19 (LOC617221), transcript variant X2, mRNA. 0.0 6498 100.00 0.950145080453706 NM_001105570.1 NUDT19 Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 19 (NUDT19), mRNA. 0.0 1018 78.49 0.324452651015563 TCONS_00083283_2 sp|A8MXV4|NUD19_HUMAN NUD19_HUMAN Nucleoside diphosphate-linked moiety X motif 19, mitochondrial; 0.0 522 70.68 0.99737532808399 1 coding 0 0 0 0 -0.00712633386559391 0.954448394799892 -0.00842802192664503 0.886983160308676 ACAGCCCGGGTTCACCGATTGCCCCGTGCGCGCCTCGCTGGGAGAGGCGCGAGTTCACTTAGCAAGCTTCCGGGGAGAGCTCCAGTGGCACCAGAACCCCGAGCCCGGTAGCCGCGCTCCGCTGCCCGTCATGAGTGTCCCGGTGCGAGCGGGCCCAAGCAGCTGGAGGCGGGCAGCCACCTTAGTGCTGGCGGCGGGCTGGACGCGCCCGGTCCCCGCCGCCGCATCCAGGCCCCAGCCACCCGCCGAGGGATTTCGGGTGCTGCTGCTGCAGCGCTCCGCGAGCCAAGGCTTCTTGCCCGGGGCGCAGGTCTTCCCGGGCGGGGTGCTGGAGGCGGCAGACCGCTCGACCGATTGGCTGCGCCTCTTCGCGCCGCACCACGGGCCCCCACGCTTTGGCCTGGGTCGCGCGCCGCCCCAGCGCGCCGCCTTCCCGGTGCTGCCCAACGTCCGGCCGGGAGCCGTGGACGAGGACGCGGCGGCGCTGCCGGATGACATCGCCTTCCGCATCTGCGCCATCCGCGAGACTTTCGAGGAGGCGGGCGTGCTGCTGCTGCGGCCCAGGGACCCCCGGCCCCCTAATCAGGCGCCGGGCTGCGCCCTCGCGCCGCCGCCCGCCTTGGCCGATTGGCGCGCCCGCGTCCGCCGGGACCCGCGGCACTTCCTGAGCCTGTGCGCGCAGCTCGACTGCACTCCCGACATCTGGGCGCTGCACGACTGGAGCGTCTGGATCACGCCCTTCTCACGCCCCGGCGGCCGCCGTTTCGAGACCACCTTCTTCCTGTGCTGCCTGAACGAGCCGCCGCCGGTCTTCCCCGACTTAGTGGAGGTGGTGGACTGCCAGTGGTCGTCTCCATCAGAGGCAATTGAAAGGCTCATATCAAAGGAAATTTTGCTTGCACCCCCACAGTTCTACGAAATACGTAGACTAGGAAACTTTGCCTCTCTCTCTGACTTGCACAAATTTTCTTTGGATCGTGAATCAGAAGGAACGGAAAGATGGATGCCGATCATATTGTTAACTGCTGATGGGATGATCCATCTTTTACCAGGAGATGAGATGTACTTAGAAGATGCAAACTTTTTAGAAAACTGCATGTCCACTGAAAAAAAGACTGAAGAAATCATGAACGAAGGCAAGAAATTTCACCGAATAGTGTTGTATAATTCCCACAATTATGGAGATTATACAGATTATAGCATCCATGTGACAGTTCTGCCAAAGTATAAACACGTGTATCCTAAGAGCTGTGTAGTGGGTAAGAGCCGTCTGTAGGGAACAGCTTCTTTATACCTGGCCCACTTGTAGTTGTTCTAGTGAAAAATGAGGGTTGACTAGAGGTGCCTGGAACTTAAGGAACTTTATTCCTGTAAGTTCTAGGACAGTCTCTCCTATCTCAAGTGTATTGTGTAGCTCTGTTATTTTATTCTTTAAACCTTATAGTATCACACTAGTATAAGGTATTAATGTTTTGTTACCAAAAAGAGACAAAAGATTTCACAGAGATTTCCACTCCTGTGTTGTTCTGTTATCAAAAGTTTAAATCAGACGTTCTGCTGCATTGTCTTTTAACTATATTAGCATACTACTCTATATGCTAGCATACTACTTTACCGCTTCCCTGGTGGCTCAGAGGTTAAAGCGTCTGCCTACAATGCAGGAGACCTGGGTTCGTTCCCTGGATCAGGAAGATCCCCTGGAGAAGGAAATGGTAACCCACTCCAGTACTCTTGCCTGGAGAATCCCACGGACGGAGAAGCCTGGTAGGCTACAGTCCACGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTTCACTCTCTTCACTCTGTTATATGCTAGGAGTTTGATCCATTAATTCCTTAGACTTTCTGCTGGAACTAATTTAAGGGTGTCTGATTAGACACATGGTGATCGGAAGACTGAGATGACCTTCAAGTGACAGTGTCATTATTTTCTTATGACTTTAGCTTGATGATTAAGATGTAATTCCGTTAAAACTAAACTGCGTAAGTTATTAGTTTACCAGATTGGAAATTACTTTAGTGATTGTTGTAAAGAAATATGAAGCCATAACAGAAGTCATAATTTTTATTTTGGAGTGCTACTTGACAGAATACAAAGAGGTTATTAGAGAAATGTAGAACTATTCATCATTAATCATGCTTATTAATGGTTATTTATTATCAGTGTTTTTAATATGGGTAATTTTTTTTACCTCCTAAGAGGAATAATAATCTTTATTGATTACAGATGGGAAGTGGTTAAGAAGAAACCAGTTCTATTTCAGATCTTTGACTATATTATGCATTGTATCAATACATTTAATTTCACTTTTCATAAAAAGTATTGATAAATGAAGACTTCCCTGTAGCTCAAATGGTAAAGAATCTGCCTGCGATGCAGGAGACCAGGATTCAATCCCTGGGTTGGCAAGTTCCTCTAGAGAAGGGAATGGCAATCCACTCCAGTATTCTTGCCTGGAGAATTCCACGGACAGAGAAGCCTGGGGGGCTCCAGTTCGTGGGGTCACAAAGAGTTGCACACGACTGGGCGGCTAACACACACACACAGAGGAAAACGTCTAGGTGAGTTGTTCTCAGCCCCAGGCACTGTTGCCCTTTAGGGGCCTCTGGCAGTGTCTGGGACGTGTTGGGTTGTCACAGCTGAGAGTGAGATGCTACTGCCATCTAGTGGAGAGAGGCCAGGGATACAGTTTAATATCCTGGAATGCACAGGACAGCCACCCACCGTGAAGAATTATCTGGTCACGGTTGAGAAACTCTGATCTAGAGTAAAATCTATTGTCTTCAGTAAATGATTCCAACATGTAAATTTTGAGAGCAACAGATAGTGTTCGCATTCCATCTGGCTTCTAAATCTATAGCAGTTCTTACCGATGTTTAGCCTCGGGCATCCTATTCTTTCATTCTCATTGAAAACAGAATGTTACAGCTGAGAGAAGCCTCAGTCAACACCGGGATTTTGCCGATGAGAAAACCGAGAAACAAATTCACACAGCTAGTCAGTGCCACAGCCAAGAGTAGAACCTGATTCTTTTTCTAGCAGGTGGTATCTGTTGCCTGTCAGTAGAGGCCTGATCATGTCTGCCCACCACATCTTGGTATTACAGTCAGCAGGGAAACCACAACACGGCCAAGAATTGGATGGAACAATGCTTTACTCATTTCCTGGAAGCAGCAAGGCCAGCTTTTGAACGACTTCTATAAGAATCTAAAATTGGGCGGGTGTCAGTATTTCAGGCTAACATGTCCTTATCCTCACAGGTCTTTGTCAACATAAAACAAGAGTGCCCTATAATGTGGGAGAAAATAAAGGACTTGAATGTAAGGGGACTTATCTCCTGGAGGATAATTTGTCGGAGGAGCTCACATACATGGGCATATGTAGGTCACATCCTTAAAGGAAACTGCTTGCCTTCCACTTTCTCTTTTCCCTTCTCACTGGCTGGAAATGGTGGCAACTGGAGCAGCTACTCTGGACCCAGAGACAGAGGCCAGATGTGAAAGCATAACTGCCTGCTACTTGGATTGCTCACCTCTTGCTTGTTATGTGAAGAAAAATACACTTCTTTTCATATAAGCCACTGTATTTTAGGATCTCTTTGTTAAAACAGTTTAGCTTGTTCCCTGATCTATAGTTCTCCCTCCTAAGCAGGTTCCCTTGGCATAGCCTTCCCTGGAAGTCTAACAATCACTGAAGCAAAAATCTTAGTCATTTGTGATTCCACCTTTTCCTTCATTCCTATATCCAGGTGACTATCAAGTCCT EMBV3_43570 GAGTCTGCCTCCTTGACAGGTGGTGAAATGTGTGTTAAGCACTGGACGCTTCCGCCAGAT Gene GeneID:540283|CPOX:XM_002684704:24_cdna Constitutive 0 NULL GeneID:540283 1 GENE CPOX NULL coproporphyrinogen oxidase EMBV3_37902 TGATGGAAACACATCTTCTAATTCCAGACAGAGGAGTGGTTGGTCAAGTGGCCGGTTGGG Gene GeneID:534331|DDX50:XM_002698864:454_cdna Constitutive 0 NULL GeneID:534331 28 GENE DDX50 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 EMBV3_32022 TGGGAAGACTGAGGTAGAGGGCACGGCAATTTTTTAGGGTCCAGCTAGAATCTCATGCAG Gene BVV0102_369165 + 0 NULL GK000015.2:79188215-79208320 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37204 AAAGGCTCTCCCAGTCAATGTGAAATGGTTGCTCTGTGGTTGTCTCTGCTGCTGTTGCAC Gene GeneID:615065|CHIC1:XM_002700000:20_cdna Constitutive 0 NULL GeneID:615065 X GENE CHIC1 NULL cysteine-rich hydrophobic domain 1 EMBV3_43172 AGATGATTCTTTGTTTAGAGGGTGAATGGCATTAAAATGTCTGGAGGAAGTTATATTTGC Gene BVT0102_364570 + 0 NULL GK000026.2:25286963-25360583 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150646 TCONS_00150647 1 XLOC_091918 Coding TCONS_00150647 XLOC_091918 Coding Coding CCDC147 26:25182077-25292608 = TSS112784 8801 1 TCONS_00150647_4 883 0.260197704806272 18 0.92053741065774 0.000987295302396951 0.000644889932811608 0.00053859988476061 0.000415819989429424 0.000517887839815666 0.000101358868915261 0.000519966030549813 0.000443915703009602 0.000541936100520072 5.2570409572648e-09 2.9276217985596e-09 4.49377232235957e-09 4.44690434774906e-05 5.95254255316684e-05 0.000102373766828497 0 0 0 0.000773517716056214 0.000946192092586278 5.72702634737298e-05 9.47420242519559e-09 0 0 0.000786191557207691 0.000528043377487659 0.000583657226618237 0 0 7.9108438415985e-09 XM_002698500.3 CCDC147 PREDICTED: Bos taurus coiled-coil domain containing 147 (CCDC147), 0.0 5806 100.00 0.365640268151346 NM_001008723.1 CCDC147 Homo sapiens coiled-coil domain containing 147 (CCDC147), mRNA. 0.0 3710 85.27 0.365640268151346 TCONS_00150647_4 sp|Q5T655|CC147_HUMAN CC147_HUMAN Coiled-coil domain-containing protein 147; 0.0 1456 90.87 0.966024915062288 0 coding 0 0 1 1 -0.0026721383703347 0.982379153710473 0.025446394955451 0.580628176972174 ATGTTGTGTTACTTCTGGGTGTGCAGCAGAGTGAGTCCGGAAAAGACTGAAAAGCTAGTGCTGGAGGAAACTGCATATGAAGAAATCGAAAGGGATTTTCAGGAGGTCCTCAATGAACTTTCAGGTGACAGAAGTTTGGAGAAATTTAGGGTTGAATATGAGAAGCTTCATGCTGTCATGAAAAAGTCTTATGACAATGAAAAGCGTCTGATGGCCAAGTGCAGAGAGCTGAATGCGGAGATCGTGGTTAATTCTGCGAAGGTCGCCACTGCCCTGAAGCTCTCTCAGGATGATCAGACCACCATCGCATCCCTGAAGAAGGAAATTGAAAAGGCCTGGAAGATGGTGGATTCAGCCTATGATAAAGAGCAGAAGGCAAAGGAGACGATTCTTGCCCTGAAGGAGGAAATAGTGAACCTAACCAAACTAGTCGAGCAAGGGTCTGGACTGTCTATGGACCAAGATAGCAATATCCGGGATTTGCTGAAGTTCAAAGAAGAAGTGACAAAGGAGCGAGACCAGCTGTTATCAGAAGTGGTGAAATTGCGAGAGTGCTTAGCTCAGACCATTGAACAGCAGCAAGAAATGGAGCGGTCCAGGGAAGAGGCAGAGCAGGCCATCATCCAGTTCCAACAAGAAATCCAGCAACGTCAGAATGAAGCTTCACGGGAGACCCGGAAGAAAGAAAAACTAGAGAAGGAGCTCAGGCAGATTCAGATGGACATGGACAGCAGGCAGACGGAAATCAGGGCGCTGCAGCAGTACGTGCAGAAGAGCAAGGAGGAGCTTCAGAGGCTGGAGCAGCAGCTGAAAGAGCAGAAGATACTCAACGAGAGAGCCGCAAAGGAGCTGGAGCAGTTTCAGATGAGAAATGCTAAACTTCAGCAAGAGAACGAACAGCACAGTTTGGTTTGTGAGCAGCTATCCCAAGAAAACCAGCAGAAGGCGTTGGAGCTCAAAGCCAAAGAGGAAGAAGTCCATCAGATGCGCCTTGACATTGGGAAGCTCAACAAAATTAGAGAACAAATCCATAAGAAATTGCACCAGATTGAAGATCAAAAGGGAGAGGTGGAACAGCACAAGGAAACCCTGAAAAATCAGATCTTGGGACTAGAGAGAGAGGTGGAGGCCTCAAAGAAACAAGCAGAACTTGATAAGAAAGCAATGGATGAGCTTCTGAGAGAAAGGGACATATTGAATAAGAATATGCTTAAGGCGGTCAGTGCAACCCAGAAACAGATAGACCTGGTAAAGCTCCATGAACAAGCCAAGAGGAATCTGGAGGAAGAAATCCAAAACTACAAAGAGGAAGCTCAGAAGCAGAGAAAGATCATCTTTCAACTGGAAAAAGAGCGAGATCGGTACATCAATGAAGCCAGTGACCTTACCCAAAAGGTCCTCATGAACATGGAAGACATAAAAGTCCGTGAAATGCAGATTTTTGACTATAGGAAAAAAATCGCTGAATCAGAGACTAAATTAAAACAGCAACAGAACCTGTATGAGGCTGTGAGGTCAGATAGGAATCTGTATAGTAAAAATCTGGTTGAGGCTCAGGATGAAATAACGGAAATGAAGAGAAAATTAAAGATTATGACCCATCAGGTAGATCAATTGAAAGAAGAAATCTCAGCTAAGGAGTCGGCACTTGTGAAACTACATCTGGAGCAGCAGCGCATAGAAAAGGAGAAGGAAACGTTGAAGGCCGAGCTGCAGAAGCTGAGACAACAAGCCCTGGAGACCAAACACTTCATTGAAAAGCAGGAAGCCGAGGAGAGAAAACTCCTGCGAATTATAGCAGAGGCTGATGGGGAGAGGCTGAGACAGAAGAAGGAATTGGACCAGGTCATCAGCGAGAGAGATATCCTTGGGTCACAGCTAGTTCGGCGCAATGATGAGTTGGCTTTGCTCTATGAGAAGATCAAGATTCAGCAGTCTGTGCTGAATAAAGGCGAGAGCCAGTATAACCAGAGGTTGGAGGACATGAGAATCCTCAAACTTGAGATCAAGAAGCTTCGCCGGGAGAAAGGGATTCTTGCCAGGAGTGTGGCCAATGTCGATGAACTCAGGCAGGAGCTTTTTCACACGCAAAGAGAGTTCCTGAAGGAGAGGACGAGATGCCGAGCCCTGGAGGAGGAACTGGAGAACCCCATGAACGTGCACAGATGGAGGAAGCTTGAGGCCAGTGACCCCAGTACCTTTGAGCTGATACAGAAAATACATACACTGCAGAAGCGTCTCATCAGCAAGACGGAAGAGGTGGTCGAAAAAGAGCTGCTCCTCCAGGAAAAGGAGAAACTGTATGTGGAACTAAAGCACATCCTGGCCCGGCAGCCTGGGCCCGAGGCCGCGGAGCAGCTGCAGATCTATCGCCACACACTGCGCGAGAAGACCAAGCAGCTTAAAGTTTTGTCTTCAGAGCTGAATATGTATGAGTCACAGAGCCAAGAATACAAGTATGAGATCGAAAAACTTAGCAACGAACTGCTGAATTTAAAGAAGAAATACCTTGCTCAGAAACGTAAAGAATACATTCAGAAAAACAAGGACAGAATAAGCATGGAGGACACCTTTTCAATGGCCAAACCAAGTGGCCCTCGTTTTACTGGGGGTGGATTTCCCCTTAGCAAGTCATCCAAGGCGAAGTCCTAACTTGAAGCTGCTGGCTGGGTCCTTCTGAACAACTCATTGGAATTCACTCTGAAACATTTTGGAGGAATCTCTTGGAAACCCCTTGGATCATGACATTTAGGGAAATCAGTCCTCGGATTCCAGGATGGAAAGAAATGCAGAACTATTATAGTCCTGTACATAGAAGAGTGATGACTTTCTATTTAATCCACATGGATATTAACAGAGTGTAATTAAATCTATTCAATCAGGTTGAATTATATCAATTCAACCATTGCATGAAGCAGATCTTTTGTTACTACCACATTGATTTATTTTGCAATGCACCACATCTAGATACTCCGTGTGGATGAAACTTTCGACCCTAATTTCTCTGCACAGACACTGGTGCATAGATTTTATATTTAAAAATGTTTTTTTTTTTAATGCAGTGCATTCTTATTAATAAGAATCTATTTTAATTTTTCCTCATTAACAAGTCATTGATGAGATGAGAAAGGTGGACACTAAACTATTTAAAAAGTGTTTTGGAGTGATTTCTGTGTGGAATTTCTTTTCAGGCCTGGCGTATGAAAACCTATTCCAAAAAGACATATGAATAAATACTTCATCATAAAAAATAAAAAGAAGCCTTGTAGAGATCTCAATCTTTGTTTTGGTAGAATATGTGAGGTTTAAAACTGCTGTGAGAAATGTTTAACACAAAGGTGTGACTCAGAGGACCAAGACTGTAAAATGAGGGGTTTGGGCTGGTATCCTCTGAAAAGCTGTCCTTCCTAGACCTCACATTTGGAGAGCAGAGTTACAAGGGACAGAGAGCTGTTTGGCTTCCAGGCTACAGGCCAGCATTTTGAGTAACTAAATCCATTGTTATTTTCTTTATTTTGAAACCACAGTTAGGTGGGCATCAGTTCAAAGTTCCCCTGTTTAGAGTGTTCAGTGGTGTGGGACACCCTGGCCATCTTTCTCACAATAACTTGACCTCTGTAATTTTTAAAAAAATGTTTGAGGGGTAAGTAGCTCATGGATAAGCAAGGATAGTATAAGTGGATAATTTCATTTCATTCATCATGAGGAGCAGGAGACTTAAGGATCCCAAGATGTTTGTTTAGATTATCCACAGAGGTGGGAGTTTAGAGGGATCTAAAATCATGTTCTTCTCTCCCTCTTGGCTCACCACCAGAAGTAGACCCAAGGCAATGATGGCCATGAAAGTGATTGATTCTGCAGTGATCCCAGGAAACAACCTAAGCGTGGGGACGTGGGACACCAGGCTAAGGCACGAAGTCAAGTTCTGCAGTTGCAGACTTTTGCTGGGCCTTGCAGGGGCCTCTGAAAACAATGTAATCACATCTCAGAGTTGGTCCCATCAGGGTGAGGGAGCTGGGGTATTTATACCCTCAGGCTTCCAGTCACTGACCAAGGACTGCTCTGGCGGGCTTCTTTTGGTCTTCCCTGCTGGTAGGCAAAGCAGATCTTAGACAAAGAGGTGGCAGTTGCTGACTGTTGAAAGCAGAAGTGGTTAAGTGCCAGGGAACTGAGTCAGGCAGCATCATCCTCTGCTGCTTCTCCTACATGATCCCAATTGAGATCTGCAGATGGAAATCAACCTCCAGGGTAGCTGGTGACCCTGTGATGAGCTGTGATCATCAGCAATTTGTATACCACGTGGGAGCATGAGGATGGTTACATACACGAGAGAATTTGCTTAGAAAACCTTAAACCTAAAGAATCACGATGGGGGCATTTCTATTTTTGAAAATCACAGATGCTGTCTTCCCTCAGAGCCAACCACCTGTATGCTAAGTCCCCTGTGTACACACCCTCAAGTTGTGAACTTTCAAAGATGTGAACATGTGTTCCTTCCGCATCAGACATGAGTGAAATTGCAGCTTGTCCTCTATCTCCTATTGCTGACAATCCTTCAGCTTTACCATCTCCCAGCTCCAGTTAGTAACTCTTCTTGCCTGTTCACTTGATGCCAACCCCTGTATGCCAGCTGTTGTACTGTACTACTGTACTTTTCAAGGTACTGTACTGTAAGGTTAAAAATGTTTTCTTTATTTTTGGTGTTTGTTTTCTATGTATTATTTGTGTGAAAAGTATTATAAATCTGCTACAGTACAGTATCACATAGCCGATTGTGTTAGTTGGGTACCTAGGCTAACTTTGTTGGTTTATGAACAAATTGGACTTACATATGTGTTCTCAGAACAGAACTTGTTGGTGTGTAGGGGATTTGCTGTATTCTGTTGAGACAGAAGACTTTTGCAGGTAAGGTGAGGTAAGGCAGTTATGACATGTGCAGCGTTGGAGGGTTTTCCAGCTATTCAGGGACATTTTGAAGTATAGCTGTAACCAACTTCCTTCTGAGCCCTTGGGTGGCTTTATATTAGGTTCACTTCTCTAGGGATGGGGCTTCCCTTGTGGCTCAGCTGATAAAGAATCCACCTGCCATGCAGGAGACCTGGGTTCGATCCCTAGGTTGGGAAGATCCCCTGGAGAAGGGAACAGCTACCCACTCCAGTATTCTGGCCTGGTGAATTCCATGAACTGTATATGTAATCCAGTCGCAGAGAATCAGACACAACTGTGACTTTCACTTTCACTTTCTCTAGGGTCATGGGGTCTGTGATTCTTGTTCTATCGCAGTGTGGCAGAGACTCTGGAGACAGAGGCCAGGTTCAAATCCTGGCTCATTTTAACAACTGAATTGAAGATGAAATGAGTTAATGCTTGGAGCAATGTCAGGCACATAGTAATTGTTCAGTAAGTATCTACCATTATCATTACGTAAGAAATATCTTAAGTTTTGAAATTGAGAATAATGGTTATTACATAATACTTCACTATATCAATTATAAAGATGATTCTTTGTTTAGAGGGTGAATGGCATTAAAATGTCTGGAGGAAGTTATATTTGCTCATGTAATTTATAGTTTAGTATCTTGCAGAAATGCCATATTGGGGACTTCATGAAAACATCTGTTTATTTTCCTTGTAGTTTTGATCTGGGGACAGATCCTTCACTTTCAGAAGTCAGAGCTTCCAGAGGGAAAGACCCTGGTGGCCTCTTGCTGCCATCTTCTTGTTTCTATCCACGTATGGAGAAGGGTGGTCAGCCTCTGCTGATGACCTCTGATTTTGGTCCCATCAGCTGAGATCACATAGGCTCTGGGAACTGACACGGCAGCTCTGTAAGCTCCTTGTGCTTATGTTCAAGAGGAGGAAGAGTAAATTAAGGCTAGCAAAAGGTGGGAGATACTGCTGCTACCTCTCATTTACTGTACGTCCTGACAGCCCAGGGTATTACAAGCAATAACTATTTAGGTACAGGTGTTGCCACTGTAGCCACAGTATGAAAATGAGCTATTAAAAACACTGAGATTTGCAGATCATTAAAGATAACTGTGAACTCACAGTGGGCTAAGGTGCTTTTAAAATCACAAATTTGAGCTGCACTGTAAAGCAACATTAGGAGATTATACAGTAGCGTCATGTTTATCCTGGGGTTTTGAGCATTTCAGAAAGGAGTCCTGTTGCTAAACCAGTCACTGACTCTCCACTGGGCTGATGGGGAGCTGGTATGGTTTCTCTGTTGGTGGAGAGAGACATGATAAAGGGGACTCCCTGGTCATTATTTGCTGATCATAGCTTCTCAGCAACTGCTGTTATAGCCAGGATTTTATTGTGCTTACCTCTGAAGAAATTGCTCAGAGCAAAGGTTTGTTGCTGTGATAAGCCATAGAGATGGAAGTGGCCATGCTAGGAGGAGACGGCAGCAACTCTCCTTGTGATGGGCTATAATTTTGCTATAAAAATTTATCCAGGGTTGGTAACTATTGTTTGGTTTCCTGGTTTGCTCAACCAGATTCTGAAGTTTGACCTAGGCCAAGATACCCATCAGAAAATACCATGTCACGACTTTAGAGCAGAATGGCATTGCAGAGCCTAGACAATTTGAGGAAAGATATTCTCTCTCATGGGCTTCCCTGGTAGCTCAGTTGGTAAAGACTCCGCCTGCAATGTAGGAGACCCCGGTTTGATTCCTGGGTTAGGAAGATCCCCTGGAAAAGAGATAGGCTACCCATTCCAGTGTTCTTGGGCTTCCTTGGTGGCTCGGACAGTAAAGAATCTGCCTGCAATGCAGAAGACCTGGGTTCGATCCCTGGGTTGGGAAGATTCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCTATGGGGTTGCAAAGAGTTGGACACAACTGAGCCACTAAGCACAGCACATTCTCTCTCATGATTGTATGGAGACCTAGTTGTAATAGGAGCAAAGGGAGGGCATTTTAGAATATTAAGATGGTAAAATAGTTTAAAAATATATCTCTCTATTTTCTTTGTAGTAGATAGGAAATATTTTTATGGCATTATCCATTTTTAACTTCTAATTCAATGCTGTTTTAGTATACCATTTCTCATATCTATTATTTAAAAGTTCCATTAGGGTTTTGAGACCCATTAGAATTTTATAACAGTATGAAATGTGATATCAACAGGTATACCATTTTTCTTTTTTATAATTAAAAATAGATTTCCTCCCCCGACTTTAAAGTACCTGATTAAAATACAGAATAGAAAGTTAGAGAATAAGCAAAAGAAGAAACAAGGCATCAATAATCACACCACCTATTGATAACTATTGTTTTCCTGGGCTAATACACGTCTCATTCACCTAGACTGACTGTACCAGTTATTTTTCCTGTCATCTGTTCTGACTAGTTGGTGCTTGTAATTCTCAATTATTAAATGTTTTGAACATTACTTTGAAATACTATTATTTTATAATTTTGAATGTGTCTTTCTCGACATCTAAAATAAGTATATACAGATACATTTTGTTTTTAAAAATCAGAGATGTAATTGAGATACATATAATGAAAGCACTATTTTAAGTGTATAGTTTGGTGAATTTTGACAAATGCATATGCCCAAGTAACAAGTATCACAATTATCGATGCCCCCTCCACCCCAAGAATGCCCTTATGTCCCTTGGCAGTCAATATTCACAGCCCCATACAGCCTAAGCAATGATGGATCTGTTTTTCCATCATATACTAGTTATATCTTTCTTAGATTTCATATAAATGGAATCATACAGTAGGCACTCTTTTGCACCTGCCTTTTTTCATGTACTTTAATGTTTGTGTGTGTGTGTGTGAGAGAGAGAAAGAGATTCACCCACGTTGTTTCTGTCAGTAATTCATTTTTATTGCTGAGTAATATTCCATTATATCAACAACACAATTTGTCTATTGATTTACCAGTTGATGAGGATTCGGGTTATTTCCAATGTTTAGCTATTATGAATAAAGTCTCTATGAATGTTCATTTTCAAGTGTTTATGTGAACAGATATTATCATTTCCCTTAGTAAATAAGAAGGAATGGAAATGCTGAATCAATTCAAGGGTTTTTATTGTTCAGTTGCTCAGTTGTGTTTAACTCTTTGTGACCGCATGATTATAGCCTTCCAGGCTTCCCTGTCCTTCACTATCTCCCAGTTTGCTCAAACTCATGTCCATTAAATCAGTGACGCCATCCAACCATCTCATCCTCTGTCGCCCCCTTCTCCTCCTGCCTTCAGTCTTTCAAGGGTACACATGCATTTAGCCTGATAAGAAACTGCCAAACTGTTTTCCTAACTGATTGGGCCATTTTACATGCCTACCAACAATGTGTGTAAATTCCAGTTATTCCAATCTTTGTCAATATTCAGAATTCTCAGTATTTATTTAAGCCATTCTATTGGATATATAGTGATATTTCATTGTGGTTAATATTTGTATTAGTATTTTCCAATGATGAATAATGTTAAGCACTTTATTCCATGTGGTTTTGGTCATTTGTATGTGAAGAGTCTTCAAATCTTTTGACTGTTTAAAAAACCTTTTTATTAGGTTGTAAAAGTTCTTTGTATCTTCTGGATACAAAATATTTATAAGATATATGTATTGCAAATATTTTCACTTGGTCTGTGGCATACCTTTTCATTTCTTAATAGTGTATTTTGAAGAGCAGACCTTTTGTATTTTATTGAGGTCTAATTTATCCTTATTTTTCTTTTGTAGTTTGTACTTTTCTTGT EMBV3_20159 ACAAAAGCATGCCAAACCTAGGCTCCAGAAACCACGTCCATCAGCTACACACCTACTACC Gene GeneID:282651|LPHN3:NM_181033:1_cdna Constitutive 1 NULL GeneID:282651 6 GENE LPHN3 LEC3 LPHH3 latrophilin 3 EMBV3_14817 TCCTTGGACAGCAAGCTCATCCCCACCCATGAAACTACCACTTACACTTCAGGCCACAGT Gene GeneID:511671|CXCL16:NM_001046095:75_cdna Constitutive 0 NULL GeneID:511671 19 GENE CXCL16 MGC137250 chemokine (C-X-C motif) ligand 16 EMBV3_21357 CTGTTGTACAGCTCCCTCTTCCAGCCTCTGGGGACCTCTTTGCCTGACTTCAGAACTATT Gene GeneID:100139174|POPDC3:XM_002690141:8_cdna Constitutive 0 NULL GeneID:100139174 9 GENE POPDC3 NULL popeye domain containing 3 EMBV3_07971 GGAAGATGGCAGCAAACCCTTCAGGACAAGCATTGCGCTCTCGAGACCCGCCCTCAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38022 TGAAACAGCTGGTATCACATTTATTTGTAGGTCCCCAAATAGCCCTGAGGTCTAAATAGG Gene BVV0102_152293 + 0 NULL GK000001.2:121887079-122815604 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005091 TCONS_00005093 TCONS_00005094 TCONS_00005090 TCONS_00005087 TCONS_00005095 TCONS_00005088 TCONS_00005092 TCONS_00005089 1 XLOC_001180 NonCoding TCONS_00005089 XLOC_001180 NonCoding NonCoding - 1:122626350-122677048 - TSS2521 2778 3 TCONS_00005089_3 84 0.111591072714183 4 0.94528275834862 0.00171559897767061 1.06325672661372e-06 0.000928604838645494 0.000222239493497066 0.000769960732528681 1.57360304605991e-10 0.00164607215124196 0.00123446085359237 0.000761287142473185 8.11621080319316e-05 1.17139913258463e-05 8.94091428800357e-20 0.000233562706134317 0.000224567492982438 0.000216942906875744 0 0 0 0.00104403570378322 0.00170988021721001 0.000347327176279913 7.42412855919579e-29 1.44117617761045e-242 0 0.00139043378312926 0.000140675158739841 0.000178452303706691 1.13030348741366e-14 1.44153645472687e-23 5.76282309108562e-09 XR_233358.1 KCNMB3 PREDICTED: Bos taurus potassium large conductance calcium-activated channel, subfamily M beta member 3 (KCNMB3), transcript variant X5, 4e-24 118 71.22 0.0953923686105112 NM_001164440.1 ANKRD33B Homo sapiens ankyrin repeat domain 33B (ANKRD33B), mRNA. 1e-87 329 81.32 0.128869690424766 0 noncoding 1 0 1 0 -1.00469763442487 0.0303210998572199 -0.0368388812419902 0.572780594239658 CAGGTGAAGACTTGCTGGCTGAGACCAGGTTCCCGGAAGTGGACGGAGTTACAGGCGGGCTGGCTAGGGGGACTCCCAGAGGTCTCCACCTCTGTGCCCTGGAGCTCTGGGTTTAGAGGCTGGGAAAAGTGATTTAAGTGAGTATAGGCTCCACTTCTGTTTTGGGTTCCCTTGGAGTCTAAAGTGTCACATTATTCCGGCTACTATGAATTTGTGAAATTGTTAGTTTTCTTCTTACTCTTGAGTGGTGGCTGTCTTCTTCCAGTGCTCTGAAAAAGATAGAGAATCAGTGGCTCTTCTAAGGGGATCCTGTGTAGTGAAAACGATCACTGGTGCTCATTTCGTCTCTTCCACTAAATTACTTTGTGACACAGGATGTTGGGGAAGACGGCTTGTAACCATCTACCACTGGCCTTGTGGTCACCTTTGCCTTAAAGCAATCTCTGGGAGATTTTGCAGGTGCACACGTCCTGCTGCTATGCCAAATGCTTCATCCCACCAGGAGTTTTTACCTGGCCGGTGTCATGGCTGCCAAGCTGAGAGAAGGACACCATGTCGGACTGTCAGGAAGATGTGTGCTGTGTGGTTTCCACCCACCAAGTCAGAGAAGCTACATATATGACGGCACAGAGGAGCCTGCCTAGTGACAAGGCAGTTCCTCTACTTCAGCTGACTCTGATTGTGCTCACTAACTGGTCATATGGACCTCCTGCTGCAATGCCTAATAACTGCAGCTCAGATGCCAACATCTTTTCTCACCTTTTTACCAGGAAGGAAGCATTGTCTTTGATTGTCCATCAGGACTAATCCTTTCTCAGCATGATACTTGTTAGCATAATTGCAGAGAAAGAACCAAAAAAGTGCATTAGGAGCTGTTCCTTTAAAAAAAAATATGCAGTTGCTCCTTGGTTTCTGTGGGGGATTGGTTTCAGGAACCCCTCTGAATATTCCCAGATTTGCCAGTTCTCAAATCCTTATGTAAATTGGCATAGTATTTACAGTTAGCCTATGTACATCCTCCTGTATACTTAAAATTATTGGCAGATAGCTTATACCTAATACAATGTAAATGTTATCTAAATAATTACTGGGCATGGCAAATTCAAATTTTACTTTTAGGAACTTTCTGGAATTAAAAAAAAAATATTTTCAATCTGCAGTTGGTTGAATCTGAAAATGCTCATCCAGGGGATATGGAGGGCAGACCATATGTAATTTGCAGGAAAAAAGCACTGTATATAATTCACTGATTCTCATAGTTAAGATTTCTTTCAGTTATCAAATTTTTCAACTATCTTTTCATTAATTTTATGTATTTAGAAACCCTACTCAATTCCCAGAAAACTTTGTAATAATCTCTATTAACCTGATCATAGTGCAGAGAAGCTTCTAGTTAATAATTTTAAAGACTCTTATCTCCAGGAAAGCATGAATTATGAACAATTCCAGTTACTTTTGGAACACATTTCGTCATACAGTTGAGTTGAAAATGAAGAATGAAAGAACTTAGTTTTGAGATCTCTTTCCAAAAGAATTGTGGAGTCACTAAAATGCCTTTTATCCAATCTTCAGAGAATAAACCAAGAAAGAAAAATATATTTGTCCATAATTGGGATTATGTTGTCAGCATAGAGATTAAAAATGAGCAGCAAATATATACTTGGAGAAGTATTATTTCTATTAACTAGAATATTGATATACTTGAAAATTTAAAAAAAGAGAAAAGATTCAACATCATTTTTTAACAAAAGGGAAATAAAACATAATTGGTATCCCTATGTTAAAGAAATTATATCTTGAAAAATTTAGTGTTAATGTTCAAGGTAAAAGAAAAATAGTGATTAAGATTGTAGAAGTGGAGAATCAACATATATCATACATTTGTCCATCTATTTTTTTGTCAACCTATAACACTATTTAATTTTTATGTTTCTGTACAAAGTTCAAAAGCAGACAAAATGTCAGGACAGTGATTGAAGTTGTATGGGGCTTTATTTGACCCAACTCATAAGTAAAGTTTAAAAAAAAGAGGATTTTATTTTTTATTTCACAAGTGATTTTTAATTATGTAGCCACAGTTTCCCCACATTTTTATATGACAACATCTTTTCTCTTACACTTTTTAAACTATAGATACAGTTTATTAGAAGTTAAAAGGGAAAGACATTCTTTCTGCTAACTTATATATCCTATTTAACTTAAAAATGATTAACCTTTTAGATATCAAGAATTGAAACAGCTGGTATCACATTTATTTGTAGGTCCCCAAATAGCCCTGAGGTCTAAATAGGAAAATATCTTTTATAAACTATAACAAAAACTCTCACCCCAAAATAAAGCTCTATGAAACTTACATAATTACAAACTTATTCAGCATTTTTACAATATCCAGAAAGCTACAGGAAAAAAGATTTTAAAAGTTAGAATTAGTACCTGGGACAAATCTTGACTAGTGTGAAAAATATGATTAAAAGACTCCTAATATTACTGAGGTGAGAAATTTCTACTTCCTTTTCACACGCCAATAAAAATGTGGTAGTAACTTTTGGTAATATTACTCTTCCCAGAGTTTTGTTGTTGTTATTGTCAAATATATTTCTTGGCTCTTGATGTTAGTAGACACATTTCATGGTCATAATTTAAAATAACCTTATTGTGAAGAGGGGAAACCTTGATATAAGCATTCTGCTGTTAATTTTGCACAGAGTTTACCGTTTAGCATGGTGGCCATGACACCACATGGTAAGAATCTCAAAGAGGTTCTGATTTAATTCTATC TCONS_00002001 r 5' 186927 TCONS_00002001 r 5' 138557 EMBV3_07821 CTTGGTGGGCAGTAGCAATGGTTCCAGTCACAAAAAGAGCGGGAACCTCTCGTGTTACAA Gene GeneID:528171|ZCCHC14:XM_002694757:516_cdna Constitutive 0 NULL GeneID:528171 18 GENE ZCCHC14 NULL zinc finger, CCHC domain containing 14 EMBV3_19883 TTCAAGATCCTGGTGGACCTGCTGAAGCTGAACGTGGCGCCCCTCGCCGTCTTCCAGATG Gene GeneID:787548|FAM128B:NM_001099204:139_cdna Constitutive 0 NULL GeneID:787548 17 GENE FAM128B MGC148835 family with sequence similarity 128, member B EMBV3_16173 CTTCTCAGAGGATTTGGTTTACACCCAGGAATGTTGGCAGTGGACACTGTTGACCTCAGG Gene GeneID:782821|LOC782821:NM_001101286:19_cdna UTR3_Alt 2 NULL GeneID:782821 25 GENE LOC782821 NULL hypothetical protein LOC782821 EMBV3_26763 TCACAGCCTCATTTTTGGTGGAATGAGAGGTGTTTTGAGCATTTCTTGATTGTCCTGTGG Gene BVT0102_064013 + 0 NULL GK000002.2:35071533-35076258 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02286 ATGAAGATGGAAACAGACAAACACTCACACTGGCACTGGACTTTCTCACTCCCCTGCCCA Gene GeneID:613499|R3HDM2:NM_001078034:43_cdna Constitutive 1 NULL GeneID:613499 5 GENE R3HDM2 MGC142849 R3H domain containing 2 EMBV3_21797 AGCTGTGTGTAGACCCCTGCACTACTCTATCCTCATGCACCCTCGTTTCTGCCATCTGTT Gene GeneID:511103|LOC511103:XM_002697443:37_cdna Constitutive 0 NULL GeneID:511103 23 GENE LOC511103 NULL similar to Olfactory receptor 2J3 (Olfactory receptor OR6-16) (Olfactory receptor 6-6) (OR6-6) (Hs6M1-3) EMBV3_41700 TCCCCCCATAATTGTGCAGGAAAGGGTGTTTGGGGAGGTAGCCTAACATACTGCTAACTT Gene GeneID:511553|LOC511553:XM_002697753:269_cdna UTR3_Alt 3 NULL GeneID:511553 24 GENE LOC511553 NULL similar to Uncharacterized protein C18orf1 EMBV3_34869 TCAGAGGTGTATTTTGTGCTGTGGTGGCTGGTGTCGTCGGTCATCTGGGTCAACCTGTTT Gene GeneID:516679|TPCN2:XM_002699421:86_cdna Constitutive 1 NULL GeneID:516679 29 GENE TPCN2 NULL two pore segment channel 2 EMBV3_25110 TGAAAGAAAGGTTATTGCTTGTTCTGGAGGCTGCGTGGCCTTTGTTGACATCGGGACAGC Gene GeneID:337913|PAG19:NM_176628:143_cdna Constitutive 0 NULL GeneID:337913 29 GENE PAG19 NULL pregnancy-associated glycoprotein 19 EMBV3_01826 CGACACTGAATGGCTTCTTCATACCCAAGGAACGCTGTGTCTTCATAAACCAGTGGCAGG Gene GeneID:503552|CYP1A2:NM_001099364:37_cdna Constitutive 0 NULL GeneID:503552 21 GENE CYP1A2 NULL cytochrome P450, family 1, subfamily A, polypeptide 2 EMBV3_06254 AAGAAGGAGCTGTGTCTTGGTGAGAAGATGAGGGAGAGCAGCATTGACGACCTGATGAAG Gene GeneID:509251|S100A5:XM_002686001:364_cdna Constitutive 0 NULL GeneID:509251 3 GENE S100A5 NULL S100 calcium binding protein A5 EMBV3_00464 CCACCATAAGGGAGGACACTGCAATAAGCCCACACACCACAGCAAAAAATAGTCCCGCTC Gene BVV0102_073732 + 0 NULL GK000019.2:27628781-27648381 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27370 TCAGGCGGGATGTTTTGGGTATTCTTTAGTTGAGTGGCATTTGTAGTTGGGCAGGGGGTG Gene BVV0102_133847 + 0 NULL GK000002.2:132621739-132636461 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106915 1 XLOC_062934 Coding TCONS_00106915 XLOC_062934 Coding Coding CDA 2:132632374-132657795 = TSS78594 5518 1 TCONS_00106915_2 146 0.330373323667996 4 0.783084185680566 0.00122522468343175 0.000832715116743898 0.00130926949402652 0.00080974966044282 0.00152929589285879 0.000606656299392448 0.00116468149376042 0.000917820325799363 0.00132351281118378 5.94655401407394e-05 3.40183234095336e-05 7.83624821956033e-06 0.000162782314618749 0.000335877738065358 0.000393572233300637 0.00173783341487937 0.000104511941563176 0.000409823191629838 0.000577163607623433 0.000838638639965563 0.000274151469075311 1.78106446359639e-05 0.00031954686836337 0.000390901738909006 0.000441186894322338 0.00113953485808669 0.000736710925090828 1.2665442099717e-05 1.86381811914531e-05 1.96484172759003e-12 NM_001193110.1 CDA Bos taurus cytidine deaminase (CDA), mRNA. 0.0 1855 100.00 0.186118158753171 NM_001785.2 CDA Homo sapiens cytidine deaminase (CDA), mRNA. 2e-170 605 74.76 0.168358100761145 TCONS_00106915_2 sp|P56389|CDD_MOUSE CDD_MOUSE Cytidine deaminase; 7e-96 277 90.41 0.993150684931507 2 coding 0 0 0 0 -0.35417404663394 0.226238815893157 0.010120130314496 0.909437728278181 CTCAGAGATTCTCTCCAGCTGAGATCTTTTTACTTTCTGGGTTGGGACAAAGAGGAATTGGAAGGAGGATGAGTGTAAATAAAGCAGCAACTTGGTCTTCTGGCTGCGCCTCACACTCCCTGACTCAGGAAGCCAGTGGGGCTGCCCCAGCCCTGCCCTTTCAGTCTCACCACACCCCTCACTGAAGGAGTCATTCAACAAACAGGGTGGTCAACACTTGGAGCTTGGATTTCCCAGACCACAAGCTGACCACTCCAGGCCTCTTCCCTGAAGCCACCGTGTCCACAGTCACATCCGACACAGTGGCACCCGTCCCGACCCTCTGACTCATCAGAGCGTGTCAGCAGTGGGAGTGGTCCCCACGGGAGCGCATAAAGCACCCGTGGACCCTGGGCATCCACGCTGGGACGAGCGCACACACACACCTTCTGTCCCCAGCCCTCTCCCTCACCCGCCCTGCCCAGCACCCCCAGGGGCGCGCACCTGGCCGCCTCCCGGCAAGGACACACCCCGGGGGGAGGAGCTGCCGTCGCGGTGGGGCCCAGCCCACACCGGCTGCGAGCTCGCGTTCCGCTTCTCCGCCGGCCCCGGTGGATCGACATGGCCCAGGAGCGTCCCAGCCTCGCCCTGGAGCCCCAGCACGTCCAGCGGTTGCTGCTGTCCTGCCAAGAGGCCAAGAAGTCCGCCTACTGCCCCTACAGCCGCTTCCCCGTGGGGGCCGCTCTTCTCACCGGGGACGGCAGGATCTTCTCGGGGTGCAACATAGAGAATGCCTGCTACCCGCTGAGCGTCTGTGCTGAACGAACTGCCATCCAGAAGGCCATCTCAGAAGGGTACAAAGAGTTCAGGGCAATCGCTATTGCCAGTGACTTGCAAGATGATTTTATCTCACCCTGTGGGGCTTGCAGACAGGTCATGAGAGAGTTTGGCACCGACTGGGCTGTCTACATGACCAAGCTGGACGGCACGTATGTTGTCAGGACAGTCCGGGAACTGCTGCCTGAATCTTTTGGGCCCGAGGACCTGCAGAAGATCCAGTGAGGGATGGAGAGCACCCTCTGCCCCGGAGCCCCTGCATTCCTACACAGGCTAAAGGGGACGACCACCTGGAGGACTTCATGAAGACATTCTCACAAACCGGGGGACATCTGCCAAACAGGCCCAACCCCCCAGGCACTGGGAGGAGACTGTTTTTGCAATTAACACTGGAGCACCAGGTTTCTCCTGAAGTGATACAGCGTTTCCATTCCAGCCCCTCCTTGCAACCCTTCTTGTCCTCCCCAGAACTCAGGGCACCCCGGCCTTCTCTCTCCTTCCCATGGGCCCTCTTTCAAATTCCAACCTAGTCTGGACTGCTTCACCATCTGCCTTCCCAAGGTTCTGTCCTGCTCTGGGTGACTTTTCTAATGATAAACATCACAAAACATTCCAGAGAGGCTTTTAGCTCCATCTCTGTCCTTGCTGGAGCTCTCAGGAGGGGCAGTCTTTATATTAAATAGAAAGACCTGGACTCTCTCTGCCAGGAAAAGAATCAGGCACCTTGGATCTGTGTAGCTGGTGTGGAGAGCTGAGTCTTTAGGTCTCTGTGCCTTCTTCCGATGAGGGGCCGCTGGACTGGGTCTTACTGCAAACGGCCATTTCTAGAATCTGTTCTGGGCTAAGTCAGACCTGGGCCCTGCATGCTGTCACCCCCAAGTATAAAGGGGATGGAGGGGGCTGTTTGTCTAGATGGGAGAGCAGACATCTCTCTGAGGACCTACTGTGTGTCCAGTGTTTTTACCTGGATTATTTTGTATTTAAAGTACTCAGTAAAGTAGCTATCTCCCCCTTCTTACAGCTGGGGGCCCTGGGTCTCAGAGAGGTTGAGTAACTTGCTTTAGGACCACAGCAAAGTTTAAACCAAAATCCAGGTCCCATCACTTCCCCCTTGTAAGGTATAGTTCGGGCTGAGGCAGAAAAGGAAAGATGACCTCAACGGAAGTAGGTTACCTTTATTCAGGCAAGAAGGGGTGACAGTCGACCAGGCTGAGCCCCAAGAGGGATCAGGGAGGCTCCATATGTATAGGGAGGTTTGTGGAAGCGATAAGGGAAACGTTAATCAGGCGGGATGTTTTGGGTATTCTTTAGTTGAGTGGCATTTGTAGTTGGGCAGGGGGTGATAAGTCTTCTGGGCAGGTGTACGGGGTGGAAGGTTTCTGGACAGGGGATGATAAGTCCCAGATAGATAAAACCGGCCTGGAGCATCAGGGTGGGACCTAAAGTTCTGTTTTGTTTTCTCCGAAGTTAGATGATTCAGCAAGGGCCTTTGAGACTGTTGTTTTCTTTCCTTCACCCCCAGGATCTAGAAACAGTGCCTGCTCTTTGCCATGTGCTATGATGTAGCAGACCTGGAATCTGAACCAGGTCTGACTCTTGAGTGTCTTTTTCTACTTTTCCCGCAGCTGATGTCTGGCTGCTTTTATTTACTGAGTCTTTTCTATATGCCAAATACTGCAGAGAAAGATGTATAAGAAACAGTCTCTGCCTTTGAGGAATTTGCAATCTGATAGGGAGAGAGGTGTAAATAGGACTCACGCTCAGAAATACACACTGTGATCCAGGCTGGTAGCAAGTGCAGGGGGGCAGCACGCTGCCTTCTGGGGAGTGAAGAGGGTCGCAGAGGGAGTCTGTTTCGTTGGTGCACTTAGGAAGGTGAGGACTGAAAAGGGAAGGAGCTGGGCTGGCTCTGTAAAGGGGGCTGGCAGCTCTGGGTGTCCTCCCTGGAGGAACTGGCCTTGGGGCCAGCCTTTGTCACTGGGATAAGAATACAGCATGGGTTTCCTGTTTCACCCCTTCCCTGGGAGTCCTTTCTTTTGAGATCAGAGCATCTGCAGGGACTACTGGTGCATGCGTGCTAAGTCATTTCCATCGTGTCCGACTCTTCGTGACCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCACCTCCAGGGGATCTTCCCAATCCAGGGATCGAACCCGTGTCTCTTACACCTGCCTATGTTGGCAAGCTAGTTCTTTACCACTAGCGCCACCTAGGAAGCCCTACTGTCTGGTAAGACTGGCTTTTCCATTACCCACCCAGACTTACCCGCTGCCATCGTGAGAGACAGAAAAGTAATATTTCCAACATTCTGCATGATGCAAGACTGCACCCTGCCTTTCTCTAGAAATGGTTGCCGAGAACTTCAGCACACTCTTCTGAATGTTCTCAACCAGGAGAAGTGAAGAAAGAAAAGAGAGGAAGCAGGAAGAAAACGGGCCAAGACATTAACATCAGTTAAAATTCTGATCAATGGAAATTTAGAGTAGTGGGTTATTTTCCTTACTACATATCTAGATTTTTAAAATTCCCAACATATTTCTTTTTCATTTAACAGCAACAACAAAAAGATGGTAGGAGTTAAACAGCCTCCTAACCATGTGATTTCATTACTCTGAGTCTCAGTTTCCTCATCTGTAAATCAGCGGTGACAGCTCCCAGGGAACAGCATTGTCTATGGATCAAAGGAAAGAATGCCTTATTGAGAGCCCAGTGCTGGGCCCTCAGTAAGCTCTTGATACATGCCAGTTGTTCCTCTTATGAAGGGTGACAAATCTGGGTCCTTTGCGGGTGGACGTGATTTTTGCAAACAGGCTTTTACACTCTTTTAATAATTTTTTAATTGAGTTCCTACTGGGTTGGAGGGCTGGGGCCACACCCTGGGGTTGCAGCAGTAAAGACAGATAAAATCGCTGTCCTCACGGGGCTCTGACTACCTGTGGGAAAGACATCTAAGTCAGCGGTTCCCAACCTTTCGGGCACCAGGGACCAGTTTAGTGGGAGACAGTTCTTCCCTAGACCAGGGGGTAGGAGTGGTTTGGGGGTGGGCCACGCCCACCACATTCACTGTGCACTGTATTTCTGTCGGGAGTTCCCAGATGGCGCAGTGGTCAAGAAACTGCCTGCCATTGCCAGGAGACACAAGAGATTCGGTTCAATCCCTAGGTCGAGAAGATCCCCTGGAGTAGAAAGTGGCAACCCACTCCAGTATTCTTGCCTGGAAAATCTCATGGACAGAGGAGCTTGGTGGGCTACAGTTCACGGGGTCAGATACAACTGAGCACGCACGCACTGCACTTATTTCTGTTATTACATCAGTTTCACCTCAGATCATTAGGCATTAGATCCCTGATCTAAATGATTCTAGGGACTTTCCTGGTGATTCAGTGGTTAAGGCTTTACCTTCCAATGTAAGGGGTGCAAGGTCAGTCCTTGGTCGGGGAGCTGAGATTCCCACATGCCTTGCAGCCAAAAAAACCAAACCATAAAAAAAATACAATATTGTAACAAATTCAAAAAATACTTTAAAAAACGGTCCACATTTTTTAAAAATCTTTAAAAAATGGTCCACATTTAAAAAAAATCTTTAAAAAATAAATGATTCTGTCCATCGTGACAAGGGCCACCCAAGGGGAAGTAAGTGCTCTGGGGACAAGTCGCAGGGGGAATGGAGCTAGCCTGAGAATGGGCAGGGCAACCCAACCCTAAGGAGGAGATATTTCAGCCGGGGCACAAGAAAGGTCAGCCAGTTAAGGAGTGGGATAGAAGGAGGGGCAAAGAATGAAGACTGGAGGACTAAGCCTAGTGATCTGTGCATGCATGCTAGGTCGCTTCAGTCGTGTCTGACTCTTTGCAACCCCATGGACTGTAGCCCATCAGGCTCCTCTGTCCGTGGGATTCTCCAGGCAAGAATACTGGGGTGGGTTGCCATGCCCTCCTTCAGCAGATCTTCCTGACCCAGGGAGCAAACCCACATCTCTTACATCTCCTGCATCGGCAGGCAGGTTCTTTACTACTTCATGGGAACAGACTGGGGAAGGCACTTTGCAAAGAAGGATTCCAGAAATTGTTCGAACAATGTCCCCTTGGAAGAACGACACTCATTTGGCTGCAGAGAGGCTGGGATGTTTGTTTTAAATAAAAGCACTTTCATTTTGCAGTCCTGCTGTTCTGAGGGCTGTGATTTCCGAGCAGCACGTGTTCTATTGTTTAAGGCTGTCTGTGTGTTTTAGGACCCTAAAGCTAAGTCCCAGATTCCCATGGACATAAATAGAAGCATGTATGTCTCTGCTGCTCTTGCCAGCTGCTGCTAACTGCTTATGTAAACTACAAGATTCTTTAGGATTTCCTTTTGGCAGGGAGGAGGGAACAAATATGATTCACAGGTGCCGGGTACTTTGGGTGCCTGTGTCTGAAATGAAGCCAGAAAATGCTGTTCAAGAATAAATAATGGATGGCCTAATCAGTCTCACATACGTGAGCGCATGCTAACTGCAGCCCGCCAGGCTCCACTGTCCATGGGATTCTCCAGGCACGAAGGTAGGTTGCTGTGCCCTCCTCCAGAGGAACTTCCTGACCCAGGGAGCAAACCCACATCTCTTACATCCCCTGCATCGGCAGGCGGGTTCTTCAC EMBV3_12833 CTGTAACCGGTGCGTTCACCAGTGTAGGAGGTATGGACTGCTTTCTGTGTGTGCAGTGAT Gene GeneID:507432|MAP1LC3C:NM_001101058:29_cdna Constitutive 0 NULL GeneID:507432 16 GENE MAP1LC3C NULL microtubule-associated protein 1 light chain 3 gamma EMBV3_30027 CCTTTGTACACACCGCCCGTCGCTATTCCCGATTGGATGGCTTAATGCAGCCCTCGCCCT Gene GeneID:100336840|LOC100336840:XM_002698307:1065_cdna Constitutive 0 NULL GeneID:100336840 25 GENE LOC100336840 NULL hypothetical protein LOC100336840 EMBV3_34236 CACATGTATGTTTTGAATTTTGAACCAAGAGTCACCTCCTGCCCCTGACTACCAGCCGCC Gene BVT0102_285929 + 0 NULL GK000029.2:44051755-44063462 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163889 1 XLOC_100063 Coding TCONS_00163889 XLOC_100063 Coding Coding SPDYC 29:44049059-44053347 j TSS122748 2664 1 TCONS_00163889_2 272 0.260135135135135 7 0.380219267553067 0.000915173218336281 0.00082852315768377 0.000291954815405248 0.00100353231349442 0.000698640698187093 0.000134802190741009 0.000340957765751777 0.000585329077154266 0.000807344462265678 0.0021125676316076 0.000681381826586872 0.00103798950402053 0.00120916900661128 0.00413964778564792 0.00323062025323576 0.00214594446551112 0.000538180923120091 0.00132766203648513 0.000792660230002668 0.00044223354302022 0.000209636300668752 0.000756842259825772 0.0015662518062612 0.00110577441524622 0.000806754355415033 0.00056533168226791 0.000613997635001854 0.000257814981019145 0.000564808741881011 0.00069857375596667 XM_002699389.2 SPDYC PREDICTED: Bos taurus speedy/RINGO cell cycle regulator family member C (SPDYC), transcript variant X1, mRNA. 0.0 1923 99.54 0.405405405405405 NM_001008778.1 SPDYC Homo sapiens speedy/RINGO cell cycle regulator family member C (SPDYC), mRNA. 0.0 661 77.66 0.29954954954955 TCONS_00163889_2 sp|Q5MJ68|SPDYC_HUMAN SPDYC_HUMAN Speedy protein C; 6e-118 344 66.05 0.970588235294118 1 coding 0 0 0 0 -0.292041766139975 0.120227632724879 0.0218998658310693 0.785731006721445 GTAGGTTAACTCCTGAGCTCAGGTCTCCCTGTCCCACCCCACCCCACCCACCCCCAACCCCCCAAGAGATGAGCAATGCCCAAGATCCGGCCACAGTCCCTGGAGCTGACACCCAAGTGAAGCTGAGGGGCTGGAGCCAGCAAGGTGAGGGCGATGAGTCTTCCCATCTCCGCCGACACCAGGAGCTCCGGGCCTTCCTCCACCTTCTGGAGCACAGTTTCCTCCAGGATTTCCTCTCCAAAGATCCCTGTTTCCAGATTTCAGACAAGTATCTCCTGGCCATGGTGCTGGTCTACTTCCGGCGTGCCAACCTGCAGCTCAGCGAGTACACCCACAGCAATCTGTTCCTGGCACTGTACCTTGCAAATGACATGGAGGAAGACCTGGAGGACCCCAAAAGCGTGATTTTTCTGTGGGCCCTGGGCCAAGATTGGCATCATCAAGTGTCAGACTTCCTGCATCAGAGGGACAAGCTGTGGGCACGGATGGGCTTCAGGGCTGTTGTGAGACGCCAGAGCTGCGAGGAGGTCATGGCCAAGGAGCCGACCCACTGGGCCTGGACTCGGGAGCGGCACCCCCACCATGGCAGGGCTCAAAGGAGCTACCCAAAGGCCCAGATTCCCCTCCCCCGGGGTCCTGGCCTCTCGCCACCCCACTGTCCTCTCTGTGCCTTGCCCCCTCACAGCAGCCTCTGCTGCCACCACCCCCGCCCCTTGCCTGTCTTATCCAAGTGCCTTTCCTACAACGCTGAGTGGCACCGCCCTACATCCCAAGCTTGGCCCTGGAGTAGGGGCTTCCTCATTGTCCTGCCCACCCAGCTGCTACTGGAGCCAGGCACCTACACCCTCCACATCTTCTCTAAGCTGCTGCTGTGCCCTCGGCGTTGATACTCGCAGGGTGAAGAACAGCCTGTCTGCTTGCCTGCTGGCCCAATGCTCTACTGACTGTGGCCCCTCCAGTCTCCTGTCTTCTTGGCCTCAGGCTGGCAGGGCTGCCTATGCCTCCTGCCCCTTCTTCCCAACCTGCAACTTGTACCCACTCTGACCTGACTCCTCTAATAAATTCATGCCCTCAGGACATTGGCTGTGCTTAGGCCCTGGTCTGGGTCCTTTACCCAGGGTAGGGGTAGGGAGGGAGTTTTGGGGAGGGGGGGTCTGCCAGATTTAGGTACCAGTGGTTGAGACCCCTGAGCACAAGCCCTGTAATAGCTCTCCCTTCCCACTGGCGACCAGTCATCCCACTGTTTCTCCTCTTTAACATCTTAGTGGATGCTGAGACCCACATAGAGCCCACGGAACTGAATGAAATGAACTATATGCAGTCCTTAGAAGAGGGCCTGGGACCTACTGGACCAAAAAGAACTCCAAAGGAAAATGGCTCTATGTCAGTCTAGAAATGCCTGCAGGGTGAGGTCTTTTTCAGAATGAGCCTTAGTCCTTGCTCTGGGCTGCAGTTGCCTCTTGTGACCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGAGATTTCCCATGCAAGAATACTGGAGTGGGTGGCCATTTCCTTCTCCAGAGGATCTTCCCAACCCAGAGATTGAACTCAGGTCTCCTGCATTACAAGTGGATTGGTTACTGACTGAGCCACGGAGAAGCCCATATAATGTGATGAACTATGTCAGGTTTGCCCACGCTCGGGTGGTGGTGGTGAGGAACAGGATTTTTGGAAAGACCATCTAGAGTAGTGATTAAGACTTGGTCTTTGGTGCCAGACAGCTTAAGTTCAAGATCCAGGTTTCTGTATGACTTACAGATTTAATCTCCTCTACTGCCTCATCTGTAAAATGAGTATTACACTAGAAAGGATACTGTTTGAGATTTGGATGAGATAATACTCGAAGGGTTTAGAACTGATCTCAAGAAAGGAGCTCAGATGCGGGTGTTATCAGTAGAGGGAATTGCTGCCCAGAGAAAGGTTAAAGGGGAGTGTACCTGAAACAGAAGGCAGAGACGTCTAAGGGGTCAAGTGGCAGAGGAATCTAAATGTAATTCCCCTCCCTCCTCTCTGAGTGGTTCCCAAGAAGCATGGGGGTGAAGCCTGGAGGCTGCAGACATTAGAAGCCAAGACAAGGACTGTAAAGTATTTTTAAGAGTTTTTCAGATAGGTAATATAGTCACATGTATGTTTTGAATTTTGAACCAAGAGTCACCTCCTGCCCCTGACTACCAGCCGCCTGGTTCTCCTTCCTGGAAACAATGGAAGTGATCATTTATGTCCATCCAGAGAAAGAATCTAAATGTATGTAACCAAATGTGGTATAATAAAAATATACAAATTTGGTCTTTGTCCCTGGTTCCTGGCACAGAGTGCCTAACACCTTTGGAATTTCCAGAGTTATAGGAATGTCTTTTGTTATTCATAATGAGCTCCTATAGATCACACCAGAGTTAATGCTAATGAGGTTATTCAAGATGGTGGCTGTTGCCAAAAAAAGTGATCTCCAGGGTGGGAACTTTCAGCTTCCCCAGCTCTTCCAGGAAGGGCGAGGCACTAGAGATTTGGGATTCCCGGGGAGGGTGGCTCCCTCCCTCCACATGTCTTTCCCTATGAATCTCTCCTATTTGGCTGTTCCTCAATTGTATCCTTTATAATAAAGCAGTAACAGTGAATAAAGTATTTTCCTGAG EMBV3_03769 CACTGACAGATGCGAAGACGCTGATCGAGAGGTCTAAGGGCAAGTTAAAGATGGTGGTTC Gene GeneID:100337077|LOC100337077:XM_002696651:236_cdna Constitutive 0 NULL GeneID:100337077 21 GENE LOC100337077 NULL tight junction protein 3-like EMBV3_39925 CATCCCTTGAGCTGTTGGTTACCAATAAGATTCTTCAATCCCTGGGACCTATGGTCATGC Gene GeneID:525246|JAK2:XM_002689603:8_cdna UTR3_Alt 2 NULL GeneID:525246 8 GENE JAK2 NULL Janus kinase 2 EMBV3_23404 TCTTCTCAAAGTATGGACAGATCTCTGAAGTGGTGGTCGTGAAAGACAGGGAGACCCAGC Gene GeneID:507120|CIRBP:NM_001034278:35_cdna UTR3_Alt 3 NULL GeneID:507120 7 GENE CIRBP MGC127049 cold inducible RNA binding protein EMBV3_21328 AGGCGGAGCCTTGCAGTGTGTCAGAAACTCCTGTGGCAGTTACCTTCAACTCCTCAACAT Gene GeneID:784525|LOC784525:XM_002689540:2_cdna Constitutive 0 NULL GeneID:784525 8 GENE LOC784525 NULL similar to Interferon beta-2 EMBV3_22670 GAAAGCGGAGACCTCCAAACCAGAGCCGTGTGATGCGGAACCAAAAAAGGCAAAGCAGAA Gene GeneID:100336455|LOC100336455:XM_002699853:27_cdna Constitutive 0 NULL GeneID:100336455 X GENE LOC100336455 NULL H2B histone family, member W, testis-specific-like EMBV3_19527 GGGAGCTGAGATCTGCCTAAACATTTCTTAAAAGCCAAATCCATGAGTATATTTGCCCAC Gene BVV0102_132606 + 0 NULL GK000002.2:30818753-30981156 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36479 GTAACAGTGTGTGGAGACATACATGGACAGGGTGATTTTGTAGACCGAGGTTACTATAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19956 GAGGCTCTTTTGCTTTGGGGTCCATATCTGAGGAATTTCTGTGGCCCGTATGCCATTTGG Gene BVV0101_006209 - 1 EMBV3_27291 GK000010.2:80631541-80965357 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018055 1 XLOC_009167 NonCoding TCONS_00018055 XLOC_009167 NonCoding NonCoding - 10:80676768-80679127 - TSS12208 2182 1 TCONS_00018055_1 138 0.293308890925756 2 0.0754877014418999 0.000870619822302291 0.000488145361602796 0.0012710464570106 0.000611367574493743 0.000444013999868132 0.00016530064548384 0.00049711150127668 0.000666196955068978 4.70081548556445e-05 0 1.31140407715542e-07 0 0 7.97652252459905e-05 0 0 0 0 0.000824887057472071 0.00136528546933692 0.00027350934813016 0 0 0 0.00100378688209549 0.000355179542202986 0.000680702803380811 0 0 6.16286936797427e-05 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 0.0 699 94.08 0.207149404216315 0 noncoding 0 0 0 0 0.103794897039727 0.460928228089073 0.0558262536074149 0.474386875475281 GCTTCAGACACACCCATCTTCCTGAGAAGACTCAACTCAAAGTCTAGAGCATCAATGCCTATGCTCCCCACCAGAGCCTAGAAAAAGAACCATCCCACAGGGTCAAATTAATGACAGTAGCCAGGAATCCTCCTGAACAATGACCACAAGACACAGTTTCTAGGAGAATATGAGCATTCTCCACAGAGCTCCTTCAAGATTATGCAGGAGAGAGGCCTCTGATTCCAACACTGCTTGGCTACCCATTCAGGGTTAACTCCAGCTATACACTTTTAGTCTGACCAGATTGAAAAGTTTGGATTTAAAAATTTTAAGCATTGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGCGCTTTCTTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCGTTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGGAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCACGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGAGCAGGAGGAGAAGGGGACAACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGAGTGCTTCGATTCATAGGGTCGCAAAGAGTCGGACGTGACTGATCGACTGATCTGATCTGATTATTATTTAAATTTTCAGTGCTTCTAAGCCACTCCAAAATCATGACAGTAGCTTTCTCTGTCGGTGTCTTACGAGCAAGGCTGATTCCCTCTGTGATTTTGGTCAGGTTACTTGACCTCCCCACGTCTCAGTTTCCTCATCTGTACCTTGAGGATAATAAAAGCACCTGCCTCAAAGGGTTGGAGTCAGGAGCAGATGAGAGACCACACAAAGCCCTTAGAATAGAGCACAGTACTTGGTAAAAGCTCTGATACATCTTGGCTGTTACAATTATCAAAGACTCTAACTACTCCTAACAAGATATGAAGCTAACTCCTAACAAAGACTCTACTCCTAACAAGATATGAAGCTTTTCTCTTATAGCCGGAGAACCAGTCATTTTGATATCTCAAGAACACTGATATTCACTCAATCTTGACTGCAGCCGATATATTCCTGAGCAAAGTTTCCTTTGTATTGCTCTACAGGAATACTGCTCCCATATGGCTGTTTCTTATAGTCAAAGGGAGACATCAAGCCCCATTTCCAGTGGGTGAATGACAGGCAGATGGAGAGCAGAGCAGCTATACCAAGGTCTCTTCTCAGTTTGGAATAGGGGCACAAATACAGCAGAGGGCATTCTCTTGGGGCTCTCTGGTGTCCAGTTTATCTTAATTCAAACTCAAAAGGGAAGCCTCCCAGAGCAATGTCACGTGGCCCTCAAGGTCAGCCCAATCCTACTAATTCAAAAGGCCACCTGGACAATCTTTCTCATGAACAGATTTTGGCCAAACCAGCTTTAATGCAGCTTCAAACCTCCATGCCCCAGCTCCACTCCCATCTCTGTACTTTGTGGCACAGTGTTGAACAACACAGAATGGTCACTGGGTTCTGTAAAGAAGCCTGGGTCCTCGGGCTTCCCGCCCCACCCCAGGACTGTTTGCTGACCTCTGACCTCATGCCTGGTCATCTGCTCTTTCCACTCTCATGGTAGTTCCCCAGCCTGCCTCCAAACAGCCAGATTCTACAACCAAGACCAGAAGGGCTTCAGGGCTGGAGAACTTCAACCCCAAATGGCATACGGGCCACAGAAATTCCTCAGATATGGACCCCAAAGCAAAAGAGCCTCTGGGGATTCAGTTTCTCTTACCAACTTTGAGCTGAGGGAAAAACATTTTAAAGGCATGTGAGGAAAGCTGTCAGAGAACTGTTTTGCTCAACATCAAATGCATTCCAGGCCTTATCTAATCAGGGAGTCTTCTTCACAGCTGATGCAGAGGCCGTTCCTGCAAATTGTTCCCGAGCCAGGGAAAGGGGCCTTGATTTTAAATACAAAATAATGGTCCTTTTGGCACAGGCAAAGTTGGTTGGCAGCTGGAGGTTTGGGGTGACCCCTGACCCTCTCCCACAGTTCCTCCTGAGTCCCGCTG TCONS_00014947 TCONS_00014948 TCONS_00014949 TCONS_00014951 TCONS_00014950 r 3' 45227 TCONS_00014947 TCONS_00014948 TCONS_00014949 TCONS_00014951 TCONS_00014950 r 3' 47222 EMBV3_39261 TTCATCAGGAGGCACGATACCCAGGAAGATGTGTTTGTTCACCATACGGCCATCACTGGG Gene GeneID:523820|LOC523820:XM_002700161:72_cdna Constitutive 0 NULL GeneID:523820 X GENE LOC523820 NULL similar to Y-box protein ZONAB-B EMBV3_43556 GAATCTTGACCTTCCCTCAGGCATAGGAATCAAAGATGGGGGCTAAGGGCCTTTCTTGAG Gene BVV0102_385717 - 1 EMBV3_26225 GK000030.2:59774049-59804946 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247100 1 XLOC_151228 Coding TCONS_00247100 XLOC_151228 Coding Coding PRPS1 X:59801236-59827385 j TSS185130 4051 1 TCONS_00247100_2 299 0.153789187854851 7 0.845341899954107 3.91380730823412e-11 3.28292123930241e-11 8.50235115039549e-12 1.54744822960459e-05 1.03621556215506e-06 8.74459919853836e-12 1.06759335986349e-11 1.67885824603558e-06 2.31120725654745e-06 0.000559556756514324 0.000299267726151614 1.96533721120748e-05 0.000201719314827529 0.000204556630700753 0.000574278816989933 0.00137002838914206 0.000557127905050408 0.00550266883250882 5.79249090156131e-07 0 9.66059270701676e-12 0.00028487602528709 0.000472699991179415 0.00142196983368838 3.31555975630902e-11 4.22775822169387e-12 9.50442382284149e-07 0.000420671006229131 0.000342871254193879 0.000372615772636084 NM_001046189.2 PRPS1 Bos taurus phosphoribosyl pyrophosphate synthetase 1 (PRPS1), mRNA. 0.0 1837 100.00 0.251049123673167 NM_002764.3 PRPS1 Homo sapiens phosphoribosyl pyrophosphate synthetase 1 (PRPS1), 0.0 1433 91.63 0.249814860528265 TCONS_00247100_2 sp|Q2HJ58|PRPS1_BOVIN PRPS1_BOVIN Ribose-phosphate pyrophosphokinase 1; 0.0 596 99.66 0.966555183946488 3 coding 0 0 0 0 0.0206750904888913 0.866205503337608 -0.04031870628135 0.658230730927779 GGGCGATTTAGAGCCGCGCACCGGGCGGGAATGTAAGATGGCGGAGTAGAAACGCGAGTGCTTAGTACTGAGTCTCAGGGCCGACTCGGTTCGGGTCTCGGAGGCAGCACCAGTGATCGTTAAGCAAAGAGAGCCTAGGGTAGTTGGCCAAGATGCCGAATATCAAAATCTTCAGCGGCAGCTCCCACCAGGACCTATCCCAGAAGATTGCCGACCGCCTGGGCCTGGAACTGGGCAAGGTGGTGACTAAGAAATTCAGCAACCAGGAGACCTGTGTGGAAATCGGAGAAAGTGTTCGTGGAGAAGATGTCTACATTGTTCAGAGTGGCTGCGGTGAAATCAATGACAATCTCATGGAACTTTTGATTATGATTAATGCCTGCAAGATTGCTTCAGCCAGCCGGGTTACTGCAGTCATCCCGTGCTTCCCTTATGCCCGGCAGGATAAGAAGGATAAGAGCCGGGCTCCAATCTCAGCCAAGCTGGTTGCAAATATGCTGTCTGTAGCAGGCGCGGATCATATTATCACCATGGACCTTCATGCTTCTCAAATTCAGGGCTTTTTTGATATCCCAGTCGACAATTTGTATGCAGAGCCAGCGGTCCTCAAGTGGATAAGGGAGAACATCTCTGAGTGGAGGAACTGCACAATTGTCTCACCTGATGCTGGAGGAGCAAAGAGAGTGACTTCCATCGCAGACCGGTTGAATGTGGACTTTGCCTTGATTCACAAAGAACGGAAGAAGGCCAATGAAGTGGACCGCATGGTGCTCGTAGGAGACGTGAAGGACCGTGTGGCCATCCTCGTGGATGACATGGCTGACACTTGTGGCACAATCTGCCATGCAGCTGACAAACTTCTCTCAGCTGGAGCCACCAGGGTTTATGCTATCCTGACTCATGGAATCTTTTCTGGCCCAGCCATTTCTCGTATTAATAATGCATGCTTTGAAGCAGTAGTAGTCACCAATACCATACCTCAGGAGGATAAGATGAAGCATTGCTCCAAAATACAGGTCTTTGCTCTGGGGCCAGCTGACATGGAACACTGATGCCATAAATTGCTGATTCTGCTATTTCTTGAAGTATTGGGTCAGTGAATCAGGGTTTGCTAGGTCAGAATTTTTTTGACATCAAGACCCTCTTCTCTGGGCCTTGGGCAATCCAGTTTCTAGGATGAGGTTTTGAGGCCCTCAAGAAAGGCCCTTAGCCCCCATCTTTGATTCCTATGCCTGAGGGAAGGTCAAGATTCAATTCCCTGTGACACCCAGCAGTGCCTGAAGTACTGCCAGGACTGTTTTTTTCCTCCAGTGAGAGAGTCCCAAGTGTCCTGGATGGCAAGCAATTCTTAACTGGAGAACAGTAGCAGGAACAGGCCTGGAGGGGCCAGGGAGGAGGCACAAAAGCTGAATGGAGTTGCAAGGAAAGCACGGTTTAGAAGAAACTGTAGCCTTAATAGCTGTGTAATTACTTCTGAGCAAAAGACATCACCAGGTTTAATTTCACATGCCCTCACCTCCCCTTACCCTTAGAACCAGAGAAAAGGAGATTACTTAGACCAAGGCTGAACTGGGCAACTCTCAAACCTAATGTCTTTATCAGAGGTTTATTTCATCTCAAGTTGGGGCTTTTCCAGATTTGAAATAAAAGCATTTTCTGCTCGAGTTTTTTTAACTTGCCCATCAATAGTATGTAGCCCTTAACCTGAGGGTTATTAGAATCATGTAAAAGTTGAAATTAAAGAAAAAGCTCTCCTATTAACTTGCCCTCCTACCATCTCGCTCTTGGTTGTGGGGGAGGGGGAAGAGACCTCCAGAAAGAAGTCACGTTGTGGGCTGTGGGGGCAGGATAGAAAGCACTGTATTGCCACCCCGAGGCCCCACCGCTTGGACTGGAGACCACTAAAAGTGTAAGTACCCTATTTGCAAGAATAGCCCTTATGTCCGCGGTCAGAAATTGGAGCCAGCCCCCTACCCTGGCTTGAATCTGCACCTCCAGTCTTAAGATGGATGCTTCTTCAGCCCTGATGATTGGCTCTTGCAGCCCTGAGCCCCAGTCTCCTCTGTGTCTGGTTTTCCCTTGCCCCGCCTTTGCCAGGGATTCATTTTCATTACCATGAAAAAAGGCACAGGCCTTTTTCAACCTGTGCATCAAGGACCAAAAGAGGTCCTTATAGGAGGGCCCTGTGTCGGATCCTCTAAGGATTGCAAAGGGGCTTCCCCTGGTGGCTCCGTGGTAAAGAATCCGCCTGCCATTGTAGGAGACTTGGGTTTTTAAATTATTGGTTTGGCGGTGCTGGGTTTGAGTTGTGGCACGCAGAATCTTCTATCTTTGTTGCAGTGTGCAGGATCTTTAGTTGTAGCATGTGAACTCTGAGTTGTGGTATGTAGGATCTAGTTCCCTGACCAGGGTTCAAACCCAGGCCCCTTGCATTGGGAGCGTGGAGTCCTCGCCACTGGACCACAAGGGAAGCCTGAAACAGGTTCTTTTGACGGTCATGATTGAAATGGAGCTACAGCTAAAGATTCTTCCTCCTGCTTTATTCTTTGGCTAGGTTTTGAGGCTTGTTTTCTCTTGGGCTTTTCTTGCAGGTCTTACACGCCTTGTTTAAAAATAAAGCAAATTCTCCAAATTATGACAGATTTTTGATGACTTGATGTTCTGTAAAATCTTGCTTGGTTCAAATATTTCTTCTAAAAAATCACCTTTTCCAAAGTCTAGGTCTTGGTAGGACAACTGCAGGGGAGTTAAGATGCTAATAGGTATGTTCAGGTCCCTTGTACTAGGCACACATGAGAGTTAGGATCCATCAGGCCTTGCCATTGGTTCTTGGGTTGCCCTTCTGGGGTGATTTCTGCTGGGGCAAGTGATGTTAGCTGCCTCAGACCTTTATGCTGTTAAGAAAAACCTGTTGTTAGAAAAACGTATTTCAGGGATAAAATTGAATGTAAGGCCAGGTGTTGTCGAATCTCAAGGAAATTGCAGTGTAAAGTCAGTTTCTCATAAATCTGATAACCAGGAGACTGATTTGAGGTAACATTGGGGCTTTCCTGGTGGCTCAGAGGTTAAAGCGTCTGCCTCCAATGCAGGAGACCCAGGTTCGATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGTAACCCACTCCAGTATTCTTGCCTGCAGAATCCCATGGATGGAGAAGCCTGGTAGGCTACAGTCCACGGGGAAAGAGTCGGACATGACTGAGCGACTTTACTTTCACTTTCTTTTGGTTCATTTGGATGGTGGTGGGCCCACTGTATGCTTTTTTCTTTTGGCTGCACTTTGTGGCTTGCAAGATCTTAGCTCCCCAACAAAGGATTGGACCCAGGCCCGGCAGTGAAAGAGCTGAGTCCTAACCACAGGACCACCAGGAATCCCCTTGAGTGTATGTTTTTGTTTTTGTTTTTATTGGAAGATAATTGCTCTACAATGTTGTGTTGGTATCTGTCATACATCAGCATGAATCAGTATAAATACTTCCCCTCCATCCCTTGAGTGTATGTTAATGAGAAGGATTGAAATGAAGGGCGGGAGATACAGAGGGTGATATCAACCTACAGAGGTTAAAAGAAGCAAGGGTAGGGTTCTTTCCTTAAAGCTTTCAGGAAGTTGAATTGACCTCTAAGATTGCAAAGGCCTTGCAGGGGCTGAACAGGCCCTGCTGCTTCTCCCTTCCCGAGGCTGCTTTCCTGTCTCAGCACTGAGGGCCTGTCCACCACCTTCCATTCCCCCAACCCCCATTCTCCTGCCTGGATGCCCTTAGTCTCTGATGTTCCTAAGGACATTGATTATGCCATGAAGGTCTTTAGGCCCTGTGTTTTTGAGTATGTTGCCTTGGTTTTTAGCTTCCAGAATGAAAGGAAAGGAAACCCAGAGGGGCAGGGAAACTTTCCATCCCAACCCTTGGTAACCTTACCCGCCCCAGAGCCTCAGAAAGCTGGCTGGCTCCTCTTCCAGCTGAGTCCCTGTGGCTAGCTCCTCTTCCAGCTGATCCTCTTTGCTGCTGATCTATTATATGCCCCC EMBV3_10480 AACAAATCTTCTTTCTGTAAGTACCCCCTGAATTATCAAACTCTATTTAAAGCAGGCCTG Gene GeneID:508660|DDX46:XM_002689191:57_cdna Constitutive 2 NULL GeneID:508660 7 GENE DDX46 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 EMBV3_05738 CTGGAGCTGACTACAGAGCCATCCTTCAAAGTGGGTTTGAACTGCTGGTCCTGCTTCCAT Gene GeneID:528175|LOC528175:XM_002688519:87_cdna Constitutive 1 NULL GeneID:528175 7 GENE LOC528175 NULL similar to Uncharacterized protein KIAA0892 EMBV3_15476 GAATTGTCTTAGTCCAGAATGGTTTCTGAGGACATCATGTAGACATCTGAGCACAGCTGC Gene GeneID:518622|CSE1L:NM_001014933:1123_cdna Constitutive 0 NULL GeneID:518622 13 GENE CSE1L Exportin-2 XPO2 CSE1 chromosome segregation 1-like (yeast) EMBV3_15202 CCTGCAGAAGGCCAGCACCTCATTCAAAACAACCCTGTAAGACCGACACACAACCACACT Gene BVV0101_032737 + 0 NULL GK000015.2:48288245-48307546 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182527 TCONS_00182528 TCONS_00185011 2 XLOC_110884 XLOC_111480 Coding TCONS_00182528 XLOC_110884 Coding Coding STRA8 4:99778571-99787302 j TSS136376 1074 4 TCONS_00182528_4 98 0.167597765363128 4 0.877434135166094 4.25883750586924e-19 9.9925370202245e-10 6.8751075808198e-06 2.46554263605621e-06 0 0 1.44390008352691e-12 0 0 0.000266040533838097 6.9840625683895e-05 0.000162961355264173 5.68372400697513e-09 0.000126496867052372 2.31267288237851e-05 5.3131233864927e-09 3.56740656463996e-15 0.00133181731643546 5.60471972962843e-05 9.24188353662501e-05 8.52788776245452e-11 1.4032246292572e-10 2.19941816838932e-29 2.97799971745865e-22 0 0.000225891440928544 6.47851738817892e-10 3.78941566495193e-05 9.16102099713212e-05 0.000102972988849685 XM_005198114.1 LOC514257 PREDICTED: Bos taurus uncharacterized LOC514257 (LOC514257), mRNA. 0.0 1553 100.00 0.80074487895717 NM_182489.1 STRA8 Homo sapiens stimulated by retinoic acid 8 (STRA8), mRNA. 3e-58 230 79.62 0.241154562383613 TCONS_00182528_2 sp|Q7Z7C7|STRA8_HUMAN STRA8_HUMAN Stimulated by retinoic acid gene 8 protein homolog; 4e-30 111 70.93 0.977011494252874 0 coding 0 0 0 0 -0.154665535940891 0.39806253534133 -0.017829461449667 0.711437932049544 TCGGAGTTCAGGCTGTTAACCCCGGTCATGATCCTTTTTGAAGATGCCTTCAATGTGGCAAGTTTCCTGGACAAAAGTGAAGCTCCAGGCACATCTAGCCCCAGTACCTCGCTGGCTGTCTGCAACTCAAAAAAACCCGAGGACAAGTTTCATCTCTACGTGCAGATCGTCGATTTTTTCAAAGACTTTTGCTGTGTTGACACTCAGGTCAAACAGGAACCGGACCTTCCTGTCGACGATGAGATGATAATGTTGAGGTGCACAGAGACGTTTGACGATGAAGATCTGTGATGCGGGAGGGCTGGAAGCAGGAGGGGATGGAGGAGGCTGATGGTCTCCGGCTTTGAGTTCTGGCAGCCCAAGTTGCCCCTGCCTTGGCGTTTTGGAGTGGGCTGCCCCGAAAGCATTTTGATGGTTGTAGTTTCTGGTTGTTATAAAGTATTTAAGAATAGTGTGGTTGTGTGTCAGTCTTTTGGGGTTGTTTTGAATGAGGTGCTGGCCTTCTGCAGGGCACACACCTGCTCCTGCTGTACTCCTCTTCACGGGGTACCAGATGCACCCGAGGACCAGGCCATGAGTCTTTCAAGAACAGGACGGCCAGGATCTGTCCCATGACACTGGGTACTTGCAGCACACCTGCTTCAGGGCATTGTGTTGATGGGTTCTAGGGATCTCTGGCGTCCACCCCACATCCTACAAGCTCTAAAAGCCCAGGAGCAATGCTGACCTCAATCTTGTGCTCCAGGACACCAAGGCAGAATCACCTATATCTGCTTCTTCTGACAATAAAGACTCCTGAATGGAGTCCATGTCAGGTCCCACAGTGCTCGCAATGCTTTTTGCTGAGGCTGCTGGGCAGAATGCATCAGTGCCCTTGGGCCTGTGTACCGGGGGTGACGGTTATTATTACATGTCAGCTTGGCAAGGCCATGGTACCAGGTACTTGGTCAAACATTTTTATAGATATTTCCCTGAAGGTTTTAGGTTGTGTTTTTGTTTTTTGTTTTTTTTTTTAGAAGAGATTACCCTTTAAATCAGCAGACTTTGAGTAAAGCAGATTACCCTCCATAGTGT EMBV3_41421 TAGCTACCTTGGGTGTTGAGGTCCATCCTCTTGTGTTCTGCCAGGTGTTCCATACCAACA Gene GeneID:786258|LOC786258:XM_002699842:54_cdna Constitutive 0 NULL GeneID:786258 X GENE LOC786258 NULL similar to GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like protein TC4) (Androgen receptor-associated protein 24) EMBV3_22061 TTTATCAACTCTTTTGCATCAACGTCTGTGGAAGACGGGTTTGCAAGGGTGCCAGGGCTC Gene BVT0102_194593 + 0 NULL GK000003.2:101176215-101181508 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20232 AAGCCAGGGCACTAAAGTTGGGGAAAGGGCAAAGCTGTCTGCAGCTACACTGACTCTAAA Gene BVV0101_063993 + 0 NULL GK000007.2:22450079-22458602 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00959 CTGCTGTATTCCAGCTGACTAGGACAGTGTTAGGATGGCATCTTCATAAATGGGTGCTAT Gene GeneID:539992|LYPLA1:NM_001034688:47_cdna UTR3_Alt 3 NULL GeneID:539992 14 GENE LYPLA1 MGC126967 lysophospholipase I EMBV3_43429 AAGATGCCGTCGGGCGTTATCACTGCCTCTATCAAAAAGAGTCCACCTGGTCAGCGCTCA Gene GeneID:615295|LAIR1:XM_002695390:250_cdna Constitutive 0 NULL GeneID:615295 18 GENE LAIR1 NULL leukocyte-associated immunoglobulin-like receptor 1 EMBV3_07481 CTCTAGTCCAACATTCCCAAAGGATCGGGTGATCCCCACTTCATTCCCTTGAGACGCGTT Gene GeneID:510161|C28H10ORF35:NM_001098923:293_cdna Constitutive 0 NULL GeneID:510161 28 GENE C28H10ORF35 MGC165833 chromosome 10 open reading frame 35 ortholog EMBV3_05257 GCATGAAAACCTCTCCTTTCTGGAACTTGGCTGAGATGTCTTGGGAACCTGTGTGCTGAG Gene BVT0102_141408 - 1 EMBV3_30447 GK000011.2:78514594-78579469 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025624 1 XLOC_014796 NonCoding TCONS_00025624 XLOC_014796 NonCoding NonCoding - 11:78535942-78537572 - TSS18553 1312 2 TCONS_00025624_1 53 0.147865853658537 2 0.195825659914058 1.03701861399807e-05 0.000145518472568916 0 2.53175267695562e-05 0.000120419006636551 0 0 0.000121720600121852 0 0 0 0 0 0 0 0 0 0 0.000655877453934473 8.770042481948e-05 0 0 0 0 0 0 4.01923639013384e-05 0 0 0 NM_001080432.2 FTO Homo sapiens fat mass and obesity associated (FTO), mRNA. 3e-08 64.4 73.45 0.0815548780487805 0 noncoding 0 0 0 0 -0.116152800318064 0.469589159952521 0.0231390075351244 0.713410233792805 GTTGGAACCTAAGGAAGGAGCCACATGGGGAACAACTGGCTTGCAAAGGGTCTCACAGCCCGAGTAGAGTAAGCTGAAGGTCCATGTTGGAGCTTAAGTGGATGAGGAGGACTTCTTGTGGTGGGACAGCTCAGCACTGAGTGTTGAGCCCAAACAGCATGAGAATGGCCTCAGCACAGGTGAGAGGCAGACAAGTATCATATGTCCTGCCCAGGGCCTGGGGCTATAAGGCGCAGGCAGAGTTAAAGGGCTGTGCATACTCAGCAGAGTGCACACATGGCAGTGCCAACGTGACTTCAGTAGAAGCTGCCTTGGGTTGATCAGAAGCAGATGATTTGAACCACCTGCAAGAGTTAACGACCACATCAGCCCAAGGGCGTTTGAATCAGAGATAAGCAGGTAACTCTGAAGACTCTGGTTCCTGCTCTAGGCTCTGTGTCTGGCACCTCACTGACTCAGACTTGTGTAAACTCAGCACACAGGTTCCCAAGACATCTCAGCCAAGTTCCAGAAAGGAGAGGTTTTCATGCAAGCTCCCAGGATTCACTCTCTATAATGCCATTGGTGAAGAGCTCATTGAAGAGGATTTTGAACTTAAAATGTAAACTCCAAACAACCGCAGATGGAAGGACGGAGTTCTTTGTAAGGGCAAATCAGCAAAGATATTAGGAGGCACTCCTTCCGGGTCAGACGGCATGGGATGAGGGTTGCAGGTGAGAAAGCTACAGAATCGGTGATGAGGAAGATATGGACAGGACTGGAAAGGGATGTTTTCATCAGTCACACCTGAATAAGGGTTTCAGCCATTTCAGAGGTTGGAGGATTCTAGAACAGAGTGGTAATAAATTTTCTCTGCCATGGTGGAAATGTTCTCTGTCTGTACTAATACAGCAGCACTAGGAACACGTAGCTAATGAGCACTTGAAATGTGACTGGTGCAGCTGAGGATCTGTATTTTTTTATTTTTTAACTTTCATTCATGAAAATATTTAAATAGGCCCATGTGGCTAGTGGCAACCACAGCAGACAGCTCAGTTCTACAGAATTGGTGACCATTGTATAATTGACTCCTGATGTACTGGGTGAGTTATGGTTATTTTCAATTGTCTCAGATAATAATAATTTTAAAAAGTATTTCAGGTACAATTTTTAGTTAAAGAATCCTTAATTCACGTAAGTCGAGTCTGCAGAGCTCTGGAGTCACCTGTAGGCAAGTTAAGTGAAGTCATCTGCTGCTTGTAGTCCAGACGGTGGTGTCCAGAGAGCGTGGAGTAAATGAGGAAGTGCTCCCCAATGGGCATTACTGGAGCAC TCONS_00025625 s 5' 14313 TCONS_00025625 s 5' 15942 EMBV3_38882 CAGTTCAACCGTCTTATGGAGCTATACCAGCTCAAGTCTCCCCGAATCCAGAAGCTGATG Gene GeneID:509804|WDR87:XM_002695035:338_cdna Constitutive 0 NULL GeneID:509804 18 GENE WDR87 NULL WD repeat domain 87 EMBV3_40447 AGCCCACATCAAGGCAGACTGCTTTCTCCCAAGAGTGCTATTACTCATATACCTCAGGCC Gene BVT0102_113952 + 0 NULL GK000004.2:103091611-103101293 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182589 TCONS_00182587 TCONS_00182580 TCONS_00182573 TCONS_00185073 TCONS_00182579 TCONS_00182582 TCONS_00182585 TCONS_00185068 TCONS_00182574 TCONS_00185069 TCONS_00182577 TCONS_00182588 TCONS_00185072 TCONS_00182590 TCONS_00182583 TCONS_00182578 TCONS_00185071 TCONS_00182586 TCONS_00185070 TCONS_00182581 2 XLOC_110898 XLOC_111492 Coding TCONS_00182586 XLOC_110898 Coding Coding TRIM24 4:102978403-103100485 j TSS136407 12718 1 TCONS_00182586_5 900 0.255857839282906 19 0.895978899255412 3.95329901965004e-05 3.33732794567952e-05 1.1393344506196e-05 4.15711025308411e-05 2.87311679622573e-05 4.11340330171311e-08 2.74130868394145e-07 7.61067940540862e-05 8.22924075994198e-05 6.15950977459645e-07 3.35688173766895e-06 3.92652950181802e-14 1.2889075515895e-05 1.212258507315e-05 5.8161035358097e-05 0.000301496469869968 1.57242371642108e-13 9.54550337706978e-07 7.95705850812302e-05 2.93513680916448e-07 1.80236334537204e-05 1.75868916113948e-13 0.000316655836405828 1.40247691428137e-18 2.80840502787114e-07 9.67782427089768e-05 3.80251263443692e-05 3.81273605086468e-07 7.33887626277159e-12 0.00017349732336397 XM_002686995.3 TRIM24 PREDICTED: Bos taurus tripartite motif containing 24 (TRIM24), 0.0 1.141e+04 100.00 0.497405252398176 NM_003852.3 TRIM24 Homo sapiens tripartite motif containing 24 (TRIM24), transcript 0.0 4305 88.89 0.255150180846045 TCONS_00182586_5 sp|O15164|TIF1A_HUMAN TIF1A_HUMAN Transcription intermediary factor 1-alpha; 0.0 1641 92.57 0.993333333333333 3 coding 0 0 0 0 0.0193679174690534 0.880940111633211 -0.0196783663154434 0.666484903075925 ATATCGGATTCTGGTTTTTTGTTTTGTCTTGCATGTTTTGGGTTATTTACCTTAATGAGCCATCAGTTCTCTCCGATGGGGACAAAGGAACTAAGAGACGGTGTTTTGTGGTGCTTCTCTTTGGGAGATTTTGTTTTGAGTCGGTAAATGGTAAAGACAAATAGAAAAAAGTGATTCGGAGTGCAGCATTTTCTTGGATTTTGTGGACAGCAGCTGGAAATGTTGAAGTTACTGTTCTTTGTGCTGTTTATTACCGTATAATGAGACTTTTGACAGTTGGAGTCATTCGGTGTCCCGTTTGCAGCCAAGAGTGTGCAGAGAGACACATCATAGATAACTTTTTTGTGAAGGACACTACTGAGGTTCCCAGCAGTACAGTAGAAAAGTCTAATCAGGTATGTACAAGCTGTGAGGACAATGCAGAAGCTAATGGGTTTTGCGTAGAGTGTGTTGAATGGCTCTGCAAGACATGCATCAGAGCTCATCAAAGGGTGAAATTCACAAAAGACCACACTGTGAGACAGAAAGAGGAAGTATCTCCAGAGGCAGTTGGTGTGACCAGTCAACGACCAGTATTTTGTCCTTTTCATAAGAAGGAGCAGCTGAAGCTTTACTGTGAAACATGTGACAAACTGACGTGTCGGGACTGCCAGTTACTAGAACATAAAGAACATAGATACCAATTTATAGAAGAAGCTTTTCAGAATCAGAAAGTGATCATAGATACACTAATCACCAAACTGATGGAAAAAACAAAATATATAAAATTCACAGGAAATCAGATCCAAAACAGGATAATTGAAGTAAATCAGAATCAGAAGCAGGTGGAACAGGATATAAAAGTTGCCATATTTACATTGATGGTAGAAATAAATAAAAAAGGTAAAGCTTTACTGCATCAGCTTGAGAGTCTTGCAAAAGATCATCGAATGAAACTTATGCAACAACAGCAGGAAGTGGCTGGACTTTCTAAACAGTTGGAACATGTCATGCATTTTTCTAAATGGGCAGTTTCCAGTGGCAGCAGCACAGCATTACTTTATAGCAAGCGACTGATTACGTATCGGTTACGGCACCTCCTTCGAGCAAGGTGTGATGCTTCCCCAGTGACCAACAATACCATCCAGTTTCACTGTGATCCTAGTTTCTGGGCTCAAAATATAATCAATTTAGGTTCTTTAGTAATTGAAGATAAAGAGAGTCAACCACAAATGCCTAAGCAGAATCCTGTCGTGGAACAGAATTCACAGCCACCAGGTGGTTTATCTTCAAACCAGTTATCCAAGTTTCCAACCCAGATCAGCCTAGCTCAGTTACGACTCCAGCATATGCAGCAACAGCAACCTCCTCCACGTTTGATAAATTTTCAGAATCATAGCCCCAAGCCCAATGGACCAGTTCTCCCTCCTCATCATCAACAGCTAAGATACCCATCAAACCAGAATACGCCACGACAAGCAATGAAGCCCAACCCCTTGCAGATGGCTTTCTTGGCTCAACAAGCCATAAAACAGTGGCAGATCAGCAGTGGGCATGCGGCCCCCTCGACTGCCAACAGCACGTCCTCCACTCCCTCCAGCCCCACCATTACTAGTGCAGCAGGGTATGATGCAAAGGCTTTCGGCTCACCTGTGATTGATTTGAGCTCACCGGTGGGAGGTCCCTACAATCTTCCTTCTCTTCCAGATATTGACTGTTCAAGTACTATTATGCTGGACAACATTGTGAGGAAAGATACTAGTACCGATCATGGCCAGCCACGACCACCCTCAAACAGAACTGTCCAGTCACCGAATTCATCAGTGCCATCTCCAGGCCTTGCAGGACCTGTTACTATGACAAGTGTACACCCGCCAATACGTTCACCTAGTGCCTCCAGCGTCGGCAGCCGAGGAAGCTCTGGCTCTTCTAGCAAACCAGCAGGAGCTGATTCTACACACAAAGTCCCAGTGGTCATGTTGGAGCCAATTCGAATAAAACAAGAAAACAGTGGACCACCTGAAAATTACGATTTTCCTGTTGTAATAGTGAAACAAGAATCAGATGAAGAATCCAGGGCTCAAAATACCAACTATCCAAGAAGCATACTCACCTCCCTGCTCCTAAATAGCAGTCAGAGCTCTGCGTCCGAGGAGTCTGTGTTGAGATCAGATGCCCCTGACAGCACAGGAGATCAACCTGGACTTCACCAGGAAAACTCCTCAAATGGAAAGTCTGAGTGGCTAGATGCCTCCCAGAAGTCACCCCTTCATGCTGGGGAGATGAGGAAAGAGGATGACCCCAATGAGGACTGGTGTGCAGTTTGTCAGAATGGAGGGGAACTCCTGTGCTGTGAGAAGTGTCCCAAAGTATTCCATCTCTCTTGTCACGTGCCCACTCTGGCAAATTTTCCAAGTGGAGAGTGGATCTGCACTTTCTGCCGAGACTTATCTAAACCCGAAGTTGAATATGATTGTGATGTTCCCGTTCACAACTCAGAAAAAAGGAAAACTGAAGGCTTTGTCAAACTAACACCAATAGATAAAAGGAAGTGTGAACGCCTACTTTTATTTCTTTACTGCCATGAAATGAGCCTGGCTTTTCAAGACCCAGTTCCTCTGACCGTGCCTGATTATTACAAAATAATTAAAAATCCAATGGACTTGTCAACCATCAAGAAAAGACTACAAGAAGATTATTGCATGTATACAAAGCCTGAAGATTTTGTAGCTGATTTTAGATTGATCTTTCAAAACTGTGCTGAATTCAATGAGCCTGATTCAGAAGTAGCCAATGCTGGTATAAAACTTGAAAGCTATTTTGAAGAACTTCTGAAGAATCTTTATCCAGAAAAAAGGTTTCCTAAACTAGAATTCAGGAATGACTCAGAAGATAATAAATTTAGTGATGACTCAGATGATGACTTTGTACAGCCCCGGAAGAAACGCCTCAAGAGCATAGAGGAACGCCAGTTGCTTAAATAAGCACACTTGCCTGTGCTGGTTTTTAGATTTTTGTTTGTTTTCTAAATACATTTTGCCATTAATTTTACATCATTACCAAGAAGAGTTTGTGACCATCTTAAGTTTTCAATGTTTACTAGACTCTAATTTCCTTAATAACCCATTTCTTTTAACCTTATTAAGAAAGAAAGGAAAAGAGGGAGGAAGGAAGGAGAAAGGAAGAAAGAAGCATCAACAACAAAATAAAAAGACATTCTTCCCACTTCCTGGATTTCAAACTGCAGTCCCGAGTGACAGCTACTATAGAAAGGACTTTGTATGAACTCTAAGTTGAAAATTTAATGTGGTCTGGATGTGTGCATTAATCCATTTTTAGAATATACCACTACTCAATTATGGACCAACATGAGTTAGGTGTACTGCATGTAAGTACAGTACTCCATGAATGTCAGTGGTAATGAGTTCTATCCTAGAATGCCCACTGGTGCACCAAGAAAGTAGACTAGATGCTGTTTAAGAAGGTGCCTAATAGCATATCATGTAAAATGGCAACTGTATTAAAGAAAAAGGAAAACAAATGTTTGATTTTTTTTTTTTTTCTTATCTATAGAGGTGTTTGATATAGCAGGTTTTCAAGACCATTTTTCATACGTTTCTAAAACCTCTCCTTCTTCCACCAGGGAAGGAAGTAAGTGTACTTGTTTGGTTTTGCTGTGTGTCTGTGTGTGGACTGGTGTTTGCATTTTAACTGTGCAGATGACCCTTTTATAACAAGACTCATTGTCTGCAGTATGGCTTTTAGTGGAGCCATCCAGAATATGAAATACAGCAGTGTGTGCCATATTTGATGTAAAGATTCTTCAACTTATACCCTTTGGGGCATTAAATACAAATTCCCCTGAAAGGGACCAGTTTTTGTGGTTTTCTTCTGTCTTTATAAATTGGAATGAAAGTCTTTTGTGGAATTTAGAAGCAGACAGTTAGAGGGAATTATAGTGAAATTTAAATTTTTTCTAAAGCATCTATTTTTCAGAATCAGAACCTCAAATTGATTCTTTCTGACTTAATCTGGGCTTCATTTTCATTCTCTTGATGGAGAGATATAGAAAACCTACCTTCTGAGGGCAAGCATATTCTTCCTGGGTCAGCCTTGGCTAGTTTAATTGACTTTCATGTATTCCTTTTACTTGTTGTTCAGTATCAAGGAAGGTAACTAGATTAAGATAGAAGAAAATTGTTGTGCCATTTCCTAATCTAACGTTTGACAGAATACATGAAATTTTTTAGTTTGCCGAAGTAAACCTTTATTTATTAAACATCAGTTGGCTGAGGATATTTTCCTCTTAGGCCAGAAGAATAAAAATACATCTGACTTGACAGAATTTTATCCTTTGGATGGTGTCAGGTCCCATGAATTAAACCTAGAGGACTTACTTTTATCCACATGGCATTATTTCTTCAAATGGATAATTTGAAAATGCCTTGTGGCTAAGTCATTGGGTTTTCAGGTACTGCTGAAGATAAAATGAGAAAATACTGATTATTTATTGGCAAGAGCATCTCACTTTGTGTAGACTTCAGTTTAGTCCATAAGTCAATTATGTATTAAAGGTTAAGAAACCGTAATTCACTTTTCCAAACACGTGTTTCAGGGAAGTTGTTGCTGTTGTATGGTTTTGAGTATGTATTTGGCATTTACTCTCCAAAGACGAACAGATTTTGGTAATAGTGCATTTACCACTTGATTGTCTTCTTTTGCTCCAGCGTCTTTAACACAGCAGCCGTGGAGCTTTTGCTAATCTGTTCATTGTTTCTATGTTAGAATACTTAGGACATTTTCTTCTTCCACATTTGTCTCCTTAGTTAAAAGGGAGGCACTGCAGATAAATTTTAAGGATGATCAAAAAGGGAAGTAGCACTTAAGAGTGAAAATTTATAATTTCCTAAATGCATCTGAGCCAGAATGTCTACTAATGTACCCAGAATTTTCACTGTTATATTCAGTGCCATATGAATCTTTTAAAACGATATTTTTCTTTCACCTTTATATATACACACACATACATAGTTGAATGAGAGGCACTTGACAACCACATATATTAGAAGAGTTTCTCTCTCCAAATAGCATTTTCTTAATAGTCTTTAAAGTCCTCTGACGTATGTGTCCAGGAGGATCCCAGCAGATCCCAGCAAAGTAGTCCTTAAATTATAATAGAAATAAGCTATCAGAAGAGCCTGACTATACCTCATGCCCACTTGGAGAGCATTCCTTTCAAAAGGTCAGTGCAACTCAAGCAACCTTGACCTAAACTTTGAAAACTCCAGTTTTTACCTCTGGTCAAAAACTCCTGGAGATTGCCCTCTAGATTTAGAACCAAGAGCCTCATGTCATATCTGCAGGACTCCCAATGCTGAAGGGGGATCGTACGATGAACAGGCCATGTGGCACTTAAAACTGACTCAGTCCAGCTCATCAAAAGTTTTCCCAGGTGCCAAGCATCTGTTCTTTCCCATCAATAAGAAAACCCAATACACAGTCAGTGACTTACAAGGATAATGCATACCATGATAGTGAAAGTGAAGTCCTGTCTGACTCTTGGCGACCCCGTGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTAGAATGGGCTGCCATTTCCTTCTCCAGTATTAAATTCCAAATACTATCTGGCAATACAGTTATCTTGCCCTTTGAATTAACAGGCCCTGCTTTTCTTTTCTGAATTGAAGGGTAGGAAATTGGAAGGTCCTAGAAGGAAAATGTCCTCTTTTGGTAGCTTTACTTTCTTTTCCAAGCTAAAGAATTGGCTCCACATTTTAGTACTACACAGTAGTGTAGACATAACACAATTTAGGACTGCTTCCAAAAAGAATTCACAAAGGGTGAGTATATGAATTTGCATTTCAGTTTTCTCTTGCTGTTAACACTGCTTAAACTTTTAAATTTAGTTTACATGGAGAGACTAGTTAGACAATGAAAGGAGGAGCTAACTCCTTTTGATCTACAGATGAACGTGAACCCCAGCAGTAGGTTGCTTCACGGGAGCAAAAGGTTTTTAAATTTAAATAGAAGATGTACTTATTTTCTTTTCATCTGTATCTGTTATGAATGAGAGAAATTGAGTGATCTGATTGGCCATTAAAATTATGGACATAACCATGAGTTCAACCATCTAATTGCTTGTTGAAATAGAAAGTGAAAGTCGCTCAATCGTGTCCAACTCTTTGCAACCCCATGGATTATACAGTCCATGGAATTCTCCAGGCCAGAATACTGGAGTGGGTAGCCTTTCCCTTCTCCAGGGAATCTTTAGAAACCCTCCTTTAAAATAACCATGCACATATTTTTAAAAATTTTTTATAATATCATGTAAGTTAAGAATTCATGTCTATGTGTATATTATCCCTTCATCTTGGATGTGAATTAACTAAAATTCACATCCTGATGGCTCATATTCTTGAAAGAGAATAATGCTAACCAATCAGATCACAGTTTCTCTCCCCATGAAGGTTTTGCTTATTGTGAAGGATATCTGAGGCAGTAGTCTTTGTTGTTGTTTTTAATTTGGGAGAGTCAACTGGTGCTTTGATTTGAATAAAAATCAGCTTTGATGAATTTTTACTGTGAGTATTTTACCACAACAAGGACTTTTTAATGGAAAAATCACTGTTTGTCATTCAGTAGAACATTAACTAGTGTGGGTCTCCTTTGTGTCCCTTGTATATTCCTCTATAAAATCGGTCCATTTAGGGACAAGCTGTGCATGCTAAGTCACTTCAGTCATATCCAACTCTTTGCAGCCCTGTGGACCATAGCTGCTAGTCCATAAATAATAGGAAGACTTTTAAACAAACAAAAACAAAACTCTAACACAGGGATTTCACCAACCTTAAAAGATAAGCAAAAAATTAATTTGGCAAATAGGAAGGAAGAGGAGGGTGTCAGTGAGCCATTAAGGGCCATGCTTTGGCAATGATGCTGGTTCTCTAGTCATTGAAAGCATTTACTGCTGAGGGTGTATGTTAAGAAAGCTCAAGATATAATAAGTCCCAAATAAAGGCATTGACATTCATATTACAGGAGGATTTTTTGGCCACTGTAAACTGTGCTTTGAAGAGATTTTAAAAAATCAAATTCTCTTCTATACATAAAACTATAGATCCAGACATTCAACCTTTTATTGCATAAAGCAAAATATGCTTGTACAGAGACTAGAGTTATGTTACTATTGTTAATACCTCAACTAATACTGTCTTAATGGACTGTGAAACCAATCCAAAAAAGTTTTTACAAATAAATGACTTGACGTTTGTTGACTTCCATTTCTACTAGTGCCTGAAACAATTAAGGTAAGCAATATTTATCAGTTTATAAAAGATTTCTGAAATTCAGTATTTGAATTAAAATTATGTTGATAGGGTTTGCTATAGACTAATGTCTTCTAGGAAGCTTGAGTATTAGACAGTTCTAGACAACATTGTGAAGTATCTTAAGCTTGGATACTGCCACATTGAAAGTTCCTGAAAGCCTTAGGAAGGTGCTTAAGTATCAGTTTTACTGTCAGTGGTTTTCAGTCACTGCTATTCTTTAAGTAGTATTTACTGCTAAGGTCAGAGTTAGGGTTTTGAGTTACGGTTTGTCATGGGTTGTTTTTCTTTTTTTTTTTGGTTGCCTCAGGTCTTAGTCATGATGCACAGGCTCTCAAATTGTGGCGTGCGGGCTTAATTGCCCTAGTTGTGGAATCTTCCCCAACCAGGGATCAAACCCACGTTCCCTACATTGGCAGGTGGAGTCTTAACCACTGAACCACTAAGGGTTATTTGGCTAACCCTACATGTGTAGCCAAGACATATTTGCATCAAAAATATTTTGGCCTAAAATTTTCTGGTAACTAGACTAAGGTCTACAAACTATTTAAAAGTATTAAAGATGACAATTTAGGTAATCCAAACAAACTTTTATTCAACACTTCATGAAGAAGGCAGTGGTTCCGAGAACAACAAAATGGGATGGAAGGCAGGAAGTTTTATGGGGTAAAGAACCAGAAAATTAGTACAGAGTCCAGAAATTGCTTGGCATTTGGTGATTGGCTGACTGGATTTATGGCATGTCTGGTCAAGTAGAGCATTTACTGGGAAATGAAAGTTATTAAGTTTTGGTTTGTGTACGTAGCACCCTCACCAGAAGTGGCTTGATGTTGGGCCTAGAATAGGCCTGGTACCACCTTTGGATCATTCTCTTGACCAGTTGAGAGTTTCAATTAAAAATATCAGTCCTAGTATGATTTTCAGTTACTATTTCCACTTTGGGTCTTAGTGTAATGTTCAGAAGAGCTATCAGGCTTGTATTCTTGGAACTGGTTCTGTTCTGTTCTCTTTGGTCGTTTTGGTCAGAGAGTCGTTAGCTGGTCAGTGGCTACCCCACACGCTGTGTACCCACTTTAGTGAGTACACAGCCTAGTAGGGAGGCAAAGATTATTAGCATCAAAATAATACCCATGGTTTGGAAAGTACTCCTGAACCAGGGTTTCCATGTCCAAAACTAACTAGAATCAAATAAGTCAAGAAATATGGATGTGAGGGATACTTCTTAAAGCCAGTTGGTCTATTTATTTGTTTCATATAATTGGTCTATACTTCTCCAGAAGTATTTATCCAGTGAGCTTGTTCCAAAGACACTGAGGCATTGGAAAACAGGGGGGAAGTTTATCATGGGCAAAAATAACTAACTACAGGATCACCAGCATCACCACAGATCTAATGGTTGGAAGTTGGATTATGTTCAATTTGAAATGGCCTGAGGTATATGAGTAATAGCACTCTTGGGAGAAAGCAGTCTGCCTTGATGTGGGCTACTTCTCCTCCTCCTCAGTTTTTGAGGTCTTCCATGTTTACACAGTTGTAAAATAAGGACAAAAACTTTGACACTTTAACAGCAGTGTCGGTGGTCAAGAGTACTTGATAGGGTACTTTGCATGAATCTCATTTTTGTAAAAGAATCAGTAAAATAACAACTGTCTATATAAATGACAAGACTTTAAAATACTAAAGAGAGCTGACGAGTTCAGTTATGGAACTGACAAGAAAATGTGGTTATTTCTATGAGCTACAAATAGATATCTAACATTTTAAGATAATAACTGGAATTATGACTGATACCATTGTACTAGAATGTCAGATTATCGGAAATTTAATATAATTTCTTGATAACATATTAATAACATGCCTGCACAAATAACCTAACAGAATTAAATATCACTTCTTATCTGATAATGCTTTTGCAATAATTTCTGGAAGTATATTCTTCCTCGCAGGAAATTTTTCAGCATGACACAAAACATGTTCCAAATATCTTTTGGTTTTTCTGTAAAAGTAAGTCTATGCTCAGTAATTAATATTTCAGAATTTTCTCTTACTTGGAAATGATTCAATAAATATCCATCATTTAATCTTAGTATGACTTTAAGGTTTCAAGTACCAAAAATATTTTGGAAACAATTTTTAAGTAGATATACCATAAAACATGATTATTTTTGAAAAGCTCCTTTATAAACTTATTCATGTTTGTTAACAATTATGTTTGGATTACTCATGAAAATTTCATGAGACTTTAAACTGCTATTATCTTCATCTAATTTCTGACAAATTCTGTAAAAGAAATAACATGAACTTATTTGACTTTTAGTAAGCCTGGTAGTTAGTCACTAAGTCATGTCTGACTCTTGCATGTCCACTAACTGTAGCCTGCCAGGCTCCTCTGTGCATGGGAATCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGAAATAGAACCCAGGTCTTATGCATTGCAGGCAGATTCTTTACCAACTGAGCTACGAGGGAAGCCATTTAAAGACGTGTCTATTTTAATTAAACTGACAAGACTTAAACTACTTTTTTTTAACCAAAGATTATCCTAGATCACATGAACTTGAAAAATATTTGGCTTAGTTTCTATATTTCTGAGCGTTTACTTGATTTATATAAACTTCTATTTGTCTTTAAGTCAGTTTAATGGAGCTCTTCACAAATTTTGGCCACACCATCCAGAAGAACAAAGTCAAACATCTGTGACATACTGATCTTACAGCTTGTTTTACAATTTTAGCCACGAGATGGGTATGATCATTCAAAACTCACTAGTTCATAAAAACAGTTGGATCCAAATTGTGTTTCTGGCAGATGGAATGAATTAAGGTTACTTGCACAGATAGTTTAAACTTTTTTACTAGTATTTGTGAAGAAGACTTAAGATTTTTTTCATTTGCCTAGTTTCCAAATACTGCCCACCCCCCTTTTTTTTTTTTGTAAAAAATTTCCTCCCTGAAGTTTGCATTCCAAAGAGACAAACCTCAGTTCCTAGCAAAGACACTCAAACATCTCACAGGCATCAACAAAGAATGCAGCTTCCTCCGAGAAAGATGTTACCTGGAGCCTGCATTTTTACAGTACCTACAAGTCTTGGGGCGTCCCTAGAGGCTCAGCTGGTAAAGAATCCGTCTGCAATGCGGGAGACCTGGGTTCAATCCTGGGTGGGGAAGATCCCCTGGAGAAGAGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTAAGGATCAGACATGACTGAGCGATTTTCACTTTTCACTTTCACAAACCTTGTGAGATAGGGGAGAGGTTCTGATTAGTAAAAAGGATAGGTGAACTTTTTCTGGTCTTAGAGACTCAATTTGTGAAACAGGAAATAGGATTGGATTACAGGATTACAACCTGAAAGATACCAAGGGGACCGTCCACCCAACACCAAATTTCAGACTGGACAGTGACTGTTCCTGGCTGTACTGAACAAACACCAAGAGCTACTACCCTCCCTAGATACAGAGTCACTCCCAAAGAGAGCCAAAAGAAAGAAGTACTTGGACAGTTTCTGGAGAAGCTGGCAACAGCTGGTAAGCTGCAAATGGGATGCAACCCACATTTCTGTCCAACCATATTTTGTGGCCTGATAGTTGAACTGCCTCCATACACAAGAACAAACAACCCCCAGGTGTCAGCAGGCAGAAAGGCCAGCCAGTTCTCAGGACACAAGAAGGCAATAGCTATTCCTGGGAGAGAAAGGATCAATAACCAATGAGTTCCCCAAACCAGATTCCCAAGAGTCTTCATTTGGAAAGGGAAGGACGTGAAATTTCTCTCTGGACCAGAAACTCCAGGGACCAGCAAGAGCTGACTTTGGTAAGAATTCTCACTTTTGGCTAGCTTATGTGGGTTTTCCCAGGATCCCGATCTACAGATTCCAGTGAGCAGAAGTTACAGTAAAGAGTGTAAATTCTGGCCTACTAGGATTTTACAAGGTTTTCCATTTGTTTTAGTTTCCCCTTGGCTGTTTAAGGGAATAACTGTTAAGAGTTTATCAGAAAATCCCTCAGAGTCCCATTCACCCTGGAAGGCCCCGCCTTTGAGGATAGATAAGGGGGTATTCAAGTTCAGGAGGAGGGGGTTTTATTATCTTAGTTATCTGGCCTTGGAGCTGTTGCAGTTTTAAAACCAACTTGATGAATGTTTTTGGTCTGGTCTCTTCAAAGTGGAAAGGCAGTTCAGTTAGGATTAGGAGACAGTATTCAGGTAAAGAAAAATAGTTGTTGGAGCCACATTTGTCTTGTTTTCTCAGATTTTTCAATAGCCTTTAGCGTTGAATCTTTCAATGAAGCTGTTTTGGAATTTTGCAGCATTTTGGAGTCTTCTGCATAGCAATTAAAATATATCCCATGCTGGTTGATTTGGGAACATTTTCACAGGTGGTTCTTAAATAAACAGTGTGTCTAACTGGAATGTCCCTGATGATGGCCATGGCAATGCTAGGTTGTCTTAGATTTTTGCCATTTCTGTAGATGTCTGCAGTTTCCAGGACCACAATTATTATGACAGAATAAGCAGGTGTGCCAGAAGGCGGACTGCTCAGTTTTTTGAAACTCAAGGATCTCAAGGAGTCTTAGGTAATAAGCCTTGGGTCTTTGGGAACCAAATTACTCCTTAAGAGGGATGTACTCTGCTAGGCTGGGGATCTGGTGGTATTTTACAGTGTACTTTGTTGCACAGAATTTTAATTGAGGTTGTCAGGTGGCCCAGTGTCAATCTAACTCAGTCCATGACCATCTTAGCACATGAGTCTTAGGTTTTAATCTTTCAAGTGTTTGATCCATGCTTACCAGTTTTACATCTTTGGATTCAAGATTCCCCTTAGCAATTGATCTATTTAATCTTTAAATGAGAAGATTTCTTTATAAAAGCAGCAGTCGCCCTAATGACTTTTAATAGTATGACTTGTGCTACTTAGAGGATGATCTGCCATTAGTTCAAACAGTTGTAATTTCTTATTTTCCAAGTCTCCCCACACTTTTTGCTGTGGCGTTCTCTTTATGCATTACCTAACTGCTGCCACCCATTGTGGGTTCCCAATATAAGCTGTCTTGGAACTTTTCTTGGAAATAAGTATACACACACATATTTCTTTTTCCCCTTACATAAAGTTTGTTTGGATCAGAACTGTGTACAAGGGGTCAGAGCTCAAATCCCTAAGTGGCTTGCCCTTGGTTATGATGAGAAAAACAACGTCAAGGGTTCAGTGGGCTCTTTGCCTATGCATCTTGTCCCACAGGCCATTGGAAGTCAGCTTGGGATTCCATCCTC EMBV3_16774 GCGGGAGGCCCCGAGAACTCAGGAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGAAT Gene GeneID:539539|RCE1:NM_001099097:83_cdna Constitutive 0 NULL GeneID:539539 29 GENE RCE1 FACE-2 MGC166124 RCE1 homolog, prenyl protein peptidase (S. cerevisiae) EMBV3_43303 CCTGTCACCCAAGAACTCAGCTAAAGCCCTGTGGATCCTTCTACACTTTTGGCCAGTACT Gene BVV0102_047376 - 0 NULL GK000021.2:8453731-8924762 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026629 TCONS_00026627 TCONS_00026625 TCONS_00026628 TCONS_00026626 1 XLOC_015084 Coding TCONS_00026625 XLOC_015084 NonCoding Coding - 11:2549865-2557799 - TSS19066 2829 1 TCONS_00026625_2 83 3 0.643766544812807 3.8697849989502e-133 9.7158435146003e-67 6.92089923908108e-70 2.36290130153935e-86 3.75574185726068e-05 9.23039426475934e-107 0.000141638265931533 3.60725345162878e-164 0.000453277624131984 0.000190605525335513 0.000210369663141144 0.000236356642147294 1.42289921712429e-05 0.000382438382233065 5.95648481747332e-73 0.00255026584630534 0.000443737940128466 0.00132817250141588 0.0004461241688191 3.63562794064093e-120 0.000115425286871604 0.00160773768576301 0.000306193467191137 3.15963896801818e-38 1.6217109698593e-62 0.000389759415930322 1.56727941346442e-41 0.000260484680499396 0.000415707933518891 0.000455830748919746 XM_005212359.1 KIAA1310 PREDICTED: Bos taurus KIAA1310 ortholog (KIAA1310), transcript 0.0 5075 99.82 0.998939554612937 NM_001115016.2 KANSL3 Homo sapiens KAT8 regulatory NSL complex subunit 3 (KANSL3), 0.0 1029 68.46 0.99858607281725 0 noncoding 0 0 0 0 -0.487344035373501 0.0367537872346778 -0.0226988560731022 0.661132150298375 AGAGCCTGGGCGCCGTCACCACGGGCGCCGGCAGCATTGTCCGTGCCGTCCCTGTGGCCACCGCCCTCTCCTCCTTGGGTGCTGCTCCTGGCGGGAAGCCCACAGCCATCCACCAGCTGCTGACCAACGGGGGCCTCGCTAAGTTAGCAAGCAGCCTCCCTGGCCTGGCTCAGATCTCTAACCAAGCGTCAGCTCAGGCTTGAAGGTCCCCACCACCATCACTCTGACCCTGCGTGGCCAGCCCAGCCGGATCACCACACTGAGCCCCGTGGGCACAGGAGCAGCCCCTTCAGAGGAGCCCGCCTCCCAGGCACTGCCCTCCAGCTCACAGCGCCTGCCTCCAGCCCCCTGAGGACACTGTGCCACATGTCTTCCTTTGCCAGGCTGGTGACGGCTGCTGCACGGTGAGGCCTGGGCGGCGTGCGGTCCTGCTGAGCTGTCCACTTGTCCACAGACCTCTTTAACACAGTCATTCTTGCCTCTCTGTCAGCTGTCTTCAGGGCTGGACCTCCGGGTCTTTTGTAATCATGAGGCAAGGTGATACAGCACCAGCAACGGGACCCTGTTCCCCAGTCGCTACTGGTCTGATTCCCAGGATCTCCAGGTCCTCAGCAGACCTGGTTGGGCACGAATCTGAGGCACTGCTTCCCCATCAGGAGCTGTAACTTGACCCAGGAAGCAGTGTCAGACTGCTCACTGCATCGTGATAAAGGAGCACCTCTTGGAAGTCTGTGCCTCCCTGCGCCAAGTTAGGAGGAGGCATCTGTGTGGTCCGGGGCTGTAAGAGTTGAGGTCAAGAGCCCTGTGCTGAGGGCAAGGATCATCCCGGCCCCCCAGCTGGCGGCTCAGTGCCAGGGGGCTTGTTCTGTCCGTCATAGTCCACCGAACAGTCGTGGGAGAGGTCTTTCCAGGCAGCACTCACCATGGGAGCCACGCTGGATACCAAGTGCCTGTTGAGGCCTGGGGACTCCACTCCAAACCCACGAGAGGGTACAGAGACCCGGACTGTCCTCTTTGAGTCCCTTTGGCTGCTTACAGACCCGGAGACAGCAGCTGCCGGGAGGAGAGAGCCAGCTTTTCTTTTTTCCATCATGTTTGGGCAGTTCTTGTATTCAGAAAGGCTGAAGAGGACGAAGGGGACAGCAAACAGAGTGACCTGGAGGGCACGTCAGTGATGAAGACGCTCGGGGCTTGAGGCTTTGCATCTGGCACCTAAGGAATTGTGGATGCGACTGGAGACGAGAATTTGCCGGGCCAGAGGAAAGAAGCCCCAGCCCTGAAATTTCTGCGCTCAGTAGTGGAGCAGGGACAGCTGCTAAGTGAACATCTTGGCCGTTCGTCCCATGAAACTCTGACATCAGGACAACAGATGCCATGCTTCAGTGTTTCTGTTTCAGCTCTGTGTGTGATTCTCATCTTCTTGCTCAGAAGTGGGAGGATGATTGGCATTGACTTTCCTATTCAGGGTGCTCAGTACCAACCTGAGTCCTGGAGGTGGAGGTCCCTGGAGAAGTGATTACTGAGGATGGAGCCCTGAGCCCTTCCTTACCTCCTCACGACACTTGTGTGCAAAAGTATTTTTAGATTTGGTTTAGAATCCAGAGCTGACTTCTTTCCCTATTGTACTCTAGAAAGTTTCCAACCCAGGTGTAAGGCATCCCACGTATGACTCTTCAGTATCTGTGGGCAGGGAGGAGCCACAGCATACCATGGCTGGACCTGTGGTGAGGGTCCTGACCTGGGGGCGGTGTGCATCCAAAGCAAGCCACCTGTGTTCAGTCCAGGAGCCTCAGTCCAGTCTGAGAGTGGCAGCCGGGAGGGAGCCTGTGGTATAGAGGAATCTCAGACAAGGCAGACGGGGGTGGGGGGTGGGCGTCCAGGAAGGGCCCGGGGCAGTGCACAGCCCAGGCATGGAGTGGGCAGGTTATACACTGTAACCCCCCTGCCGACCTCCTGCCGAGCTGGTCTCTGAAGTGATTCACACAGAATTAGCCTGCATCTTTGCATTAGTGGGCAGGTAACTGCTTTCTGAAATTCAGGCAGCATTCAGTAAGTTGGAGGAAGATATGAAATGTGAAAAAGACGTCCAGGGTCAGGGGTTTGGTGACTTGACAGGTAAGATCATAACACACCAAGAGGAACTGAGGACAGTGAGACCTGTGTGAAGCTTTTAGCAGTCACTCCCAGCAGGTTCCTGAACAACCCATTCGTGACTTAGGAGTGCATTCTAGACAGCACTGGGGGGCTGCTCTGAAAGATGCTGACCCCGCTGTGGGCTGGGCCAAAGGAGAAGCTGAAAAAACATCCCGCGTTTGTCTGAATCCTAGTAAGCTTCCCACGAATGATTTCCTGAGGTTTGGCTTATACACCGGGAAGGATGCCAAAGCTGGAGAAGGGGAGTAGTGAGAACCTTGGTTCTGCTGCACTGTGGAGGGACGGGCTAAAGGGGGAAGTAGTTGAAGTCCCTAGAATCATGCTCCCCAATTCCATACTTCTGTAGCCACATTTCTTGAAGTGGAGAAGGAGCTTTCCTCTGCCAATCACGTAGCAGACCTAGAGTCCCTGACCTCGGAAGGTGACAGTACTGGCCAAAAGTGTAGAAGGATCCACAGGGCTTTAGCTGAGTTCTTGGGTGACAGGTACGTGCTGATGCCCTGTGAAAGCAGTCTTTGTGTGAAGACGAGGTCGCTGATGGAGGAAGACCTGTCCTCGGCTCCAGCGCTGGGACAGTCCTGGGCTGGATGGGGTATCGAGCTGAGCTGCTGTGACAGTTCTATTTTCCATTAGCCAAAACAATTAAATAAAAACAGATTTTGGACTGCTTCAACA TCONS_00026628 TCONS_00026630 TCONS_00026630 s 5' 0 TCONS_00026628 TCONS_00026630 TCONS_00026630 s 5' 0 EMBV3_27778 TTAGAGATGGGAGGGACTTGCCTGGTTGTCCAGCGATCAAGACTTTGTGCTTCTACCCCA Gene BVT0102_030901 - 1 EMBV3_24912 GK000017.2:68436274-68445519 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081662 1 XLOC_050541 NonCoding TCONS_00081662 XLOC_050541 NonCoding NonCoding - 17:68441935-68442503 - TSS61602 568 0.28169014084507 1 0 0 0 3.2584464179006e-05 0 0 0 0 0 0 0 0 0 0 0 0 0.000883488740879493 0 0 2.52496930836809e-05 0 0 0 0 0 0 0 0 0 0 0 XM_005196580.1 C23H6orf89 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf89 (C23H6orf89), transcript variant X1, mRNA. 1e-16 91.5 76.67 0.200704225352113 0 noncoding 0 0 0 0 0.0453202862508289 0.790586285966614 0.0140961429250627 0.859558775895476 TTCAAGGACGCAAATAATCTCCACTTAGTTTCTTCTTAGACCTGGGCAGGTTGTTTCACTTCTCTACACCTCAGTTTCCCATCTCTACTGGTGTATCATTTTTGTTTGGCTGGATAGCAAGTGGGATCTTAGTTCCTCGACCAAGGATTCAACCTGCACCCCCTGGGGTAGAAGCACAAAGTCTTGATCGCTGGACAACCAGGCAAGTCCCTCCCATCTCTAAAATAGGGATAAAGCTAGTACTGCTCTGAAAGGCGGTTCCCAGGGCCAAAATAAAAGGCGGGAGAGTGAGCTAAGTAACGCACGTAAGAAGCTCCTAGCTGTCAGATCTACTCTGATTGAGGAGACAATCGCGTGTCTGCGTGGACAGCCTCGAGCCTCAAGGACAAGTGGTTTTTCCAGACTTTTGGACTCAAGTGCTCAGCCTCCGGAAAAGCCAGGAGGAAGGTGGCCAGAGGTTTAGTTTGGGAATTCTCAGATCCAGCCTGGTCTCCCAGAATTCCCCAGATAAAACCCTTCATTTGGGGCCCAGGGGCATCCAGGCCCATGTCTAGGTTCCCAATGAGGT TCONS_00078013 TCONS_00078014 TCONS_00078015 . 3' 2950 TCONS_00078013 TCONS_00078014 TCONS_00078015 . 3' 3517 EMBV3_43378 TCACAGGCAGAGCTCAGCTGTCGGATTCTTTTCAAGCTGCTCAAAAATAAATCTGCCTAC Gene GeneID:538532|GOLIM4:XM_002684944:189_cdna Constitutive 2 NULL GeneID:538532 1 GENE GOLIM4 NULL golgi integral membrane protein 4 EMBV3_34061 CACTCTCCAACATCTCTGTCGGAAGACCGTCAACGGCCACCTGGACTCCTACGAGAAAGT Gene GeneID:282081|SOCS3:NM_174466:320_cdna Constitutive 0 NULL GeneID:282081 19 GENE SOCS3 SSI-3 suppressor of cytokine signaling 3 EMBV3_05916 ACCTGGAGAAGGTATTAGGATGGAGATGCACAGATACACAGCTACAGACCCAGGGATCCA Gene GeneID:513010|CREB3L3:NM_001034432:24_cdna Constitutive 1 NULL GeneID:513010 7 GENE CREB3L3 MGC127249 cAMP responsive element binding protein 3-like 3 EMBV3_25092 AAATCCACGTGGTTCCCCCGTCATCGCAAGATGAATCCCTTTCCCGCTACAGTGTCTCAG Gene BVT0102_206564 + 0 NULL GK000017.2:36616304-36905388 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238280 TCONS_00178735 TCONS_00222179 TCONS_00088422 TCONS_00232767 TCONS_00142474 TCONS_00149039 TCONS_00054133 TCONS_00218948 TCONS_00048460 TCONS_00080098 TCONS_00142473 TCONS_00217533 TCONS_00010456 TCONS_00142472 TCONS_00098202 TCONS_00217532 TCONS_00157807 TCONS_00107076 TCONS_00207410 TCONS_00071397 TCONS_00186558 TCONS_00201119 TCONS_00131532 TCONS_00131531 TCONS_00098198 TCONS_00201121 TCONS_00111146 TCONS_00157808 TCONS_00222180 TCONS_00178734 30 XLOC_144947 XLOC_108508 XLOC_135488 XLOC_053209 XLOC_142251 XLOC_086899 XLOC_090916 XLOC_031942 XLOC_132267 XLOC_028592 XLOC_048982 XLOC_086898 XLOC_131531 XLOC_006007 XLOC_086897 XLOC_058448 XLOC_096262 XLOC_062987 XLOC_125926 XLOC_043168 XLOC_112610 XLOC_122767 XLOC_080237 XLOC_080236 XLOC_058444 XLOC_122769 XLOC_067046 XLOC_096263 XLOC_135489 XLOC_108507 NonCoding TCONS_00207410 XLOC_125926 NonCoding NonCoding - 6:23347892-23353722 - TSS154917 5830 2 TCONS_00207410_9 134 0.0926243567753002 1 0 1.72333371503078e-05 3.12579338021033e-05 8.97322537255123e-06 1.0516600452595e-05 2.14811889678482e-05 1.40288715721895e-05 2.88780016705382e-05 1.12801021788367e-05 6.35072155119095e-05 0.00041251086712145 0.000191001510876784 0.000252096903565238 5.14478876342631e-05 0.000111004556234904 0.000136880232340654 0.00165019416274279 0.000591785563680731 0.00199994435028684 1.75275769134447e-05 2.9993852213128e-05 2.91036372079802e-06 0.000433635055153301 0.000511901343491923 0.000521894878950002 1.55748737310143e-05 1.42774587620872e-05 8.1051534842746e-06 0.000129203216094594 0.000149954028011754 0.00014697972206339 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 3e-112 412 93.12 0.0471698113207547 0 noncoding 1 0 1 1 -0.069690739815313 0.656150057551822 -0.417956814901918 0.00586549399704504 GGGAAATCGGGGTCCTTCGGAATGGGACCACCCACGAGGCCACGTCTGGAATGTCGTCGTGAGACCAGCCTCATCCTGAGGTGCGACCGGAAGGTCGGGAACCCATTCCAGACAAAGCAGGGGAGTCGACCCTCCTGTCCAGATCAGGAGGGTAGATAGGGCTCAGAGGAAGTGGTGCGGGAAAACCTCGGTGTTCCTCTTGAGGGAGACCGGGATGTCGGGGCACTTTGTGGGTCGCAATCAAGGGTGACAAGTACCGTTTCGGCCTCCAATACCTAACGTGGGACTTCTCCTGAGACACTGTAGCGGGAAAGGGCTTCATCTTGCGATGACGGGAGAACCACGTGGATTTTCTCGAGTTGCAGCGGGATTCTCGAGTTACGACGGGGAATTCAGGATGCCTCTTGTGTTGGCCCAGGGAAGTCCAATCTTCCATTCGAGTTGCGAAGGAAAGCTAGAGAATGCTCTCGAGTGACTGCAGGGCCAATAGACCTCATCTAGGCTTGTGTCCAGAAGCCAATGTTCCTCTCCAGGGGCGAAAGGGATCTCGGGGTTGCATTCCAGACGCACCCGGGGAGACAGGCATCCATCTCGAGTGGAAGCAAAGAACTCCGCTCTGCTCTTGAGTCGCGACGGGTATCTCTTGGAGCTCACTGGGTGGAATAAAGGGAGTCAAGCCTCTGGAGGCGTTTGGAGAGAGGTCGAGAGACTGGTCTCTAGGCCATACAGGAGACGAAGGCCCTCAAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATGTTTGGCACAGTAGTCTAGTCCCAGGGGACAAAATACAGGGAAACCTGTTATTACCTGTGGGACTCTGTTTTGAGTGAAGGAAGCAAGCATATAAATACATAAGTTGATATTTGTCACCCTGTATAACTTTTCAAAGTTACTATAAATCAACAAACATTTATTTAAGATAAAGGGAATTGTTATTTAAATATCAGATTTATCCATTATTAAAACTAGATTTGTCTAAATATCTTTCTCCACTATATTTTGTTATTGTTGAGTATGTTTTTTCATTTATAACTACTTTAGCCCCCCCTTCCAGAGACAAGCTAGTATTGACAAAATTAATTTTATTTCACTGGAAATTTTGTGCTCTTGATCTAGTTTTGCTATCCAGTTATATAGTGTAACTAAGAATGGATGCGTTTAGTGAGTTTATTATTTGCCAATCTATGTTAGATGAGGTTTGGTCTCAAAATGGTACCCTTGGCCCTGTTATGTGGGGAGGGTAAAAGTTGAAAGAAGTATTTTATACTTGCTCAAACATCTGATTTTTATCTCCAACTATACTGTGAACATGATATATCATTTAGAGACCTCGAACCAGCTTTGTTTAAATTTGTTGTTTTTAACTTTTAGATCTCCTTGTGTTTTACCACTCCTTGGTTACTTGTTCATGCAATACTTCACATTAATTCTAGTCTTGTTATAATTTCATGGCTAATGTATAACTGGATGTTTTCAACTAGTGGGCTGATGTTAATTTTGTCTTCCCTGTCTTTGAAATGCCTTATTTGCTTTCGTAGTTCAAAGCGTAGAAACTAGATTTGGTTCTGTGTCTTTACCCCCATTTAGAGATAATGCTTACAAAAGAATAGCTTTGAGTAATCTTAAGTGAGCTACTTTAATGGTGATTGAAAGAAAGAAAATTATAGTATTATTCACTCAAGCCATTCTTTGTACTTTGTCTGAATGAATAAGCATACTTGTCTCATAATTATAACTAAACAGGAAGTTAATTTCTTGTCAGTGATGTAATGAGACATGGTATGCAGCACTTATCTCTTAATCCTTAAAGTAAAAGAAACTTTTCAGAATTTCTCAGAAGTTACAAATCCCAAGCTAAATTGACTTTTAAAAGGGCTACTCCTTCCATATATGAAATTGTTCAGACCTGAAAATCTTTTTGCCAAACTCCCTTCTTTTGAAATCACTTCCAGTAGCCATGCATTTCTGAAATATTTGTTTTTCTTCCTTACTGTTTGTTTCTATGTACAGTATTTAAATTTCACAACATTGAAGTTTAAAAATTTTTTGTTTACTTCATAGCAGACTTGATGTTTATAAGAATTAGAGCAATTATTGTCTTACTAGTTGGGCAATTAATACTTCATGTTGACCTTTATCATTGGTCTGAGGATATACCTTTATATTTGCTAGATTGTAAAGCCTCTTTGAGGGTGATTCTTATCTCAAAATTTCTTAAGGCACTTATTCTCTTTGCTTCCTACATCATGCCCTCATCTTATCCATCTCCTAGGGTAATATTTTATGTTGGTCAGTATAGGTTTAAGAGGCAAGATCTGTCTTTATCGTGTGGATTTCCATGGTCATACAAATCTTCAAGTGAAAGTGTTGAAAGAAATTGGCTCTTAAATAAAATACAAGAAATAGCTTATACTAAGGGAATGAACTTTGTTTTCCCCAAATTGATGATACAAAATGTGTCTGTGCTACTTTAGTCATTATGACTTTGATGCAAAATGGATGGCAGAGATTGGAATAACATGATTGTGGAATGTGGTGGTAATTATTATACTTAGTATCATAATTATTGTACTTGACCTTACCACAGTAGTCATCTGAGTTAAGTTTTGCCAAGTCCTTGAGAGAATGATGGAACTAGACAAACTAGAAAAGGTTATTTAGAAAGTTACACCTCAACAGCAGAATTGATTAAATAGGAACTTTGTTTTTGTAAATGTTGGCTTTGGTTATGTTGCTCTAATGAGTAAGTAGTGGTGGTCATTAAAAGAATGTTTAGTGGAATGCATAAATAATAGTTACTGGAGGTTTTGAATCTTACTAATAACTCATCCACCCATATGTCTGGTCTATAATTTGGTTATTCATAATCTTATTTTTTCAATTTATAAGCTAGAGAAACAAAAGCAAATATTTAGCATTATGTTTAGACTTCTGCTCTTAGCCAGTATCTCTCATCCTTCTCATGTTTTACCTCTAATAGTCAATTGTCAAAAATACTGTGTCCCATGATGACAGAAGCAAAGATCTTCCTCAAAATAAACTGTAGGCTTTTGAGTCCCACATAAACAATGGTCAGACTCATTACTGTTTAATCATGTACCTCCAGATGAAAACACTCACTGGCTTAAGCTATACCTGTTGGTTGGCTGTTAGAGAAAATTCATTGACTTATTTTTCTATGGGTCTATTTAGGCTTTTAAGGGAAAGGAGAAGCATATTTCCCAGTGGGAGAAGGCCTGGATTCTCACACTGCCAGGTGTTCAGGAGGTCTCAGGAGAAGCAATTCAAAGGGAAGTGATCCTCAAAGGAGATTTCCCCACAAGAGCACATCATGGTGAAAAAGTGTCTTTTTTTTTTTAATGGACAATACAGTTTTCAGCATTGTGCCCTAGTTATATTAGGGGCTTCCCAGGTGGCATAGTGGTAAAGAATCTGCCTGCCGATGCACGAGATGCGAGTTCGATTCCTGGGTTGGGAAGATCCCCTGGAGTAGGAGATGGCAACCCACTCCAGTTTTCTTGCCTGGAAAATTCCACAGACAGGAGCCTGACAGGCTGCGGTCTATGGGGTCGCGAAGAGTCAGAAGCAGCTGAGTACACACACGTAAGCATACGTAGTTAATATGTTGTTGATCCATCTTAGTGCCCTTTCAAGGTGAGTGAAGCCTTTAGCTAATGTGTGCCAAACTCCCTGCCCCCTATTTTCTATTTCAGTGATCTTGATAGTTGGTAAAGAACCCACCTAAGTAGTGCTTTTCTCTATGGTCTGGAGGTATGGTCAAAGTACGAAGACTTCGTTGGTTATATATATGAGCTGTTCTTTCTGATTCTTGCCGCTGTTCCTCTTAAACTACTAAGAAGCAAAAAGCTGACAATTGAAGTTTTTCGTATAATTTTATAAGTTGTTTTTGTCTCTAAAGCCTTTGAAACCTTTAGGTTCTAAAGTCATTTTGTAAGGTGAACAGCAAAGACAAAATAGCTTTTGAAAATTCTTTGAATAGATGCTACATTGGAAACTGATCTCAAATCCAATAAATACGGTTCTTGCAGTGCCACAAATAATTGTTTTCTTACTTGACTTTAAAGTCCACATAACTTGAAAAATGGGTAACCTAGGCTCAATCTGAGTATAGTGAGATACAAACCAACGGTGAATAAGGAGAAACAAGAAAACACCAATTTTCTGTGTCTTGTTTAATTTGTGGCATTTATTCCTTGAGTAAAATGAAGAGTTGGGTTGGTGGGATTGAAATTTTTGTCTCCAGTTTGCAAAATACCGTGTCAAAGTAGTCATTAACTTTAAATACATCTTTGGAGCAAGGACACTTGAGAAGGTAGCCTTAAATGTATCTCTAGACCTATCTTTTAGGTTGTCTAGTAGATAACACTGCTTTGCTCTCCAACCAGTCCTGAAGCTCAGCGTGTCTTACATTTGGTTTGATTCAGTCTTTGCTTTCCCCTCTTAAGGGGGCACTAATGTAAAATGGATAGAAGACCTATTTCCATAAGATTGTAAGGGTAAAGTGATCAGTGTGTTAAGATAATTTTCATCCTTGGTGACTTAAGTTTATGTTCCTAATGTAGTTATCTATTCATCTATCCTTTGTAGCAGGAGTTCCTACAATATGTGGGTGAGGATGGTCTTTGATATCCCGTAAGTTAAGTAAAAGTTATTGTGTGGGCATCTGTATTAGGGATAGAGGGTCAGCAGTTCATCAGATTATTAGAATTCCTAGTCTTTGTCACAAATAATGCCATGTACATGGCTAGGAGTGTATGAAAATGTGAAGAAACTACAGAAACCAAATTTAGGATGGTCAAAAAAATTTAGGATAGTCTTGTTAACTTGTCAGGGAAAGGGATGGGTATGTGGGGAGTACATGAAACATCTGCAACACTTAAAATCTGAAGATCTAGAAAGTCAGTCATTTCTAGTATACTATTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCGGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCTAGTGCAGGAGAGTAGAAAGTGAAAGTGAAGTCGCTCAGTTGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCCACGAGACTCCTCGGTCCATGGGATTTTCCAGGCAAGGGTACTGGTGTGGGGTGCCATTGCCTTCTCCAATACTGTTGCTGGTACATCAAAAAATTCAACCATTTGTCTTGCTCAGAAAGCGATCAATGGCTTCGCATTGCCTGTGGAATAGGCTTTGCCATAGTATTCAAGACTCGAAAGATCCAGCCCTGATTAACCTTTCTAGCCATATCTGCTACTCTCTTAACCTGTACCCCACTGTGTGTCTGGTATACCAAACTACAAGCAAGTTTTTTAACATCCTGTTTTCTTTCACTCCCCTGGATTTTAATTTCTCTATCTTGAATGCTTATCCCTCTATCAAGACCGAGCTCAAATATCACTGGTTTAAACTCAGGCAAGGTTAATGATAACCGTTTCAAAATTCACAAAGCAGTTGAATGCCTTTTAAGTATTCAGGTTGTTTGAAACGTAATTTTTTAATTTTTTTATATTATGTCTGCTTTCTATTAGTCTATTGGGGAAGGCATTCATGGTCTATCTTGTTATTTTCAGATGTAATATGCTTGACACCAAAAAGGCAATCTCCATATAAAT TCONS_00202772 . 5' 97 TCONS_00202772 . 5' 97 EMBV3_00974 GTCATCAGCACCTCCCTCATTCAGCGGGTCATCCTGGCAGCACAAATTTCACACAGACAA Gene GeneID:509670|XIRP1:XM_002696947:527_cdna Constitutive 0 NULL GeneID:509670 22 GENE XIRP1 NULL xin actin-binding repeat containing 1 EMBV3_43356 AGAGAACAGAAGGATGTTTTCCAGCCTTCAAATTGTTTGCAAAGGCAGCAGCTGGCGACC Gene GeneID:100335396|LOC100335396:XR_083635:192_cdna Constitutive 0 NULL GeneID:100335396 3 PSEUDO LOC100335396 NULL coiled-coil domain containing 3-like EMBV3_15833 AGCCTGTCCTATGTGAATTTTTACTCTATGATGTGTGGTACCTTACTAATAAAGACATGG Gene BVT0102_050414 + 1 EMBV3_28501 GK000008.2:100305230-100377460 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28051 ATGAAAACCAGTGTGGCGTTTGCGGTATATATGACTTGTTCTTTTCCAACTCCCTAAATC Gene GeneID:539497|ZNF830:NM_001082612:280_cdna Constitutive 0 NULL GeneID:539497 19 GENE ZNF830 CCDC16 MGC148459 zinc finger protein 830 EMBV3_15692 GCCAGTCTGAGTCAAGGGGTCTGGACTTGAGCTCTTTTCTGTGCAATAAACACTTTCACA Gene BVV0101_053271 + 0 NULL GK000007.2:22338567-22401800 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28789 AGGTGATAAAGAGGCAAAGCCCCAAGCCCCCAACACTACTAGCCTCCAGGTTCTGTAGCT Gene GeneID:505574|CD59:NM_001037446:30_cdna Constitutive 0 NULL GeneID:505574 15 GENE CD59 MGC133675 CD59 molecule, complement regulatory protein EMBV3_20213 TCTTACGAGAGTGCGATGGGTATTGCTTGTGTAGGATCGATGACTAGGCGGAGTATGTCC Gene BVV0102_295655 + 0 NULL GK000001.2:2502547-2739247 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000097 TCONS_00000096 TCONS_00000099 TCONS_00000100 1 XLOC_000018 Coding TCONS_00000096 XLOC_000018 Coding Coding MIS18A 1:2490241-2508176 = TSS36 6780 1 TCONS_00000096_2 235 0.270648967551622 5 0.62222593955615 1.45270600238322e-07 0.000337285268054422 0.000716253522092795 0.000600898416445941 0.000613367217147649 8.88608242147066e-08 0.000608456810295177 0.000609840655896179 0.000730486884299515 4.54973942179604e-05 1.14886657389001e-09 9.59269559697908e-09 1.15101388471727e-06 6.68147407143053e-05 1.16586484767264e-06 0.000719077303094049 3.64214606758245e-08 9.88245793836964e-14 0.0010135347928926 0.000725548459626634 1.16758092530867e-07 1.47981375393994e-10 3.73094939654977e-08 1.46191182680927e-08 0.00045404807305658 5.36906974738087e-07 6.33215928252556e-05 0.000274092414325088 8.44277303274389e-06 1.43783388334341e-08 NM_001098010.2 MIS18A Bos taurus MIS18 kinetochore protein homolog A (S. pombe) (MIS18A), 0.0 2044 100.00 0.166961651917404 NM_018944.2 MIS18A Homo sapiens MIS18 kinetochore protein A (MIS18A), mRNA. 0.0 785 83.72 0.108554572271386 TCONS_00000096_2 sp|A5D7N9|MS18A_BOVIN MS18A_BOVIN Protein Mis18-alpha; 9e-170 472 100.00 0.995744680851064 1 coding 0 0 0 0 -2.98825655439846 0.018618454279672 0.0205224870197105 0.724088240208615 CCGTGATGCTCCGTGGCGCGGGCGATTTGTAGCTAATGGCGGGCGCTTGGTCCTCGGATTGTTGTGAAGGATGTTCCTCTACTAACTGTACGTGTGGCCACAAGAGCAAGTGGGGTGACTCCTCCCTGTTAGGCAGGCGGCTCTCGGAAGACTCGAGCCGCCACCAGCTGCTGCAGAAGTGGGCGAGCATGTGGAGCTCCGTGAGCGGAGACGCATCGGCGGCCTGCCCTGAAAGGAAGCGGCGCGAGGAGGCTGCGGAGCCGGCGGAGGAGGACAGGCCGCTGGTTTTTCTGTGCTCGAGCTGCCGGCGGCCGCTGGGAGACTCGCTGAGCTGGGTGGCGAGTCAGGAAGACACCAACTGCATCTTGCTACGCTGTGTTACCTGTAATGTTTCTGTGAATGAGGAACAGATATTATCCAAACGTAAAAATGAAAATGGTTGCATCCTGGAGACTTTGTACTGCACAGGATGTTCGCTCAACCTCGGCTACCTGTACAGGTGCACACCCAAGGATCTAGACTACAAGAGGGACTTGTTCTGCCTTAGTGTTGGAGCCATTGAAAGTTATGTTTTAGGGTCATCTGAAAGGCAAATTGTGTCAGAAGACAAAGAGCTTTTTAATCTTGAAAGTAGAGTTGAAATAGAAAAATCTCTAAAGCAGATGGAAGATGTTTTGAAAGCCTTGCAAACAAAGCTTTGGGAGGTCGAATCAAAACTGTCCTTTACCAGTTGTAAAAGCTGAATTGGTTCCAAGGCCCACATTCTGCAGTCCTCTGCTGATGGAGAGTTATTTCATATGTAGCAATTCTTATTATAATATCCTTCACTTAGAACTGAAAGAATTGGAAACGGTCATGTACATTGTATCCTCTTGTACTGATCAGCTGGTCACATGAGAAGAACTGTAGAACTTTTCTGGCTGTATTTGATGGTAAAGAGGTGATTGTTTCCTAAACTCCAGTTTTAAAGTCATGATTATTGCTGGAATTTAAGAGTTGTTGTTTTGGTAACAAACTGCTATAATTTTTTGAATAGTTTTCTCCTCTGTACTGGATTTGCTATTTTTTATGTCCTATTAACTATGTTTCACTTCTAATAGTTTGAGCACTGTTTAGTATTGAGTGCTTGAAAATCTTAGAGGTTTTTCCATCCACTGTGTGGTTGAATCTTCTTTGAAAACTAATGAATACAGCTTTCTGGAGAAACTGGTCAGTTGAATTATTTGTCAAAACTCTGAAATCTTGCACAAGAGTAGATTAGCATGTATTATGTTGGTTGGATTCCTTTTGGTCCTGTTTATTTACTCTTCTGTGCTTGCTTAGCCGCTCAGTCTTGTCGGACTTTTCAGCCCCGTGGACTGTAGCCCTCCAGGCTACTCTGTCCATGGGGTTTTACAGGCAAGATTGCTGGAGTGGGGTGCCGTTTCCTTTTCTAGGAATCGAACCTGTGTCTCCTACGTTGCAGGGGGATGCTTTACCTGCTGAGCCATCAGGGAAGCCCTTATTTACTACCATATGCCCCATAATCTGGCAGCATAGTTACCAAAGAGAGTAGTAATCATTCCCAAGGTTGGGATTCTGGGAGAATTTTCAGTTTTCATAATGTAAGACTTCTAGTAAGCACTTGTTATTTTTATAATGAGGGGAAAAATAAAGATTAAAACAAAGTGCTTTACAATTGATTTTTATGAAACAGTTGTTTAAGTGAGCGCAAAAATCCTGCTGTCATAAATACCACACATTTACTGGGCATGGCAGTGTGAGGGGTCCTGCTCAGGACTCTAAAGGTAACCCCAAATTTCCCCAGCCTCCACTCTGTTTTTGAGTATAAATGAGGCCACCTAACATTAGTACTCAGCATGTTTGAGTAACTTAACTCAATTTCTGCCCAGAACCTCCCTAATTATTTCCGAGAATACCTCAAGTTGTCATGGCAAAAGGTCCTAACTCAAATTGACTTGATCATTGATCATTCACAATTACTACGTTCTTTTTGAAAGATTGTCTGCAGCCTCTAATCATTTGAAGTTAGTGAGCTGTCCAGGTCTCTTCTCAACACCTGCTGGCAACAGTCACCCTGCCTCAGTAAGCTTGATGAGGTCCCCAGGGTCTGTCATTGTAGGTGTTTCGGTGGCGCTTGCGTGAAAGTTCATTTGGAACAGATGGGAGAGTTATTTTAACCGAGAGATTCAGCTGACTTTCTAGTCGCACGAGTGAACAGTATTCTCCAGTCACTTTCAGGGCCATTCCAGTTTCGCTCCTTAATTCCTTTTACCCTGTTCATCCTGGGCTCCAATTTCAAGCCAATCCATACACCTTGAAAACAACTCATTTCACCAATGCAAAGTAATTTCTAATATCCAGCAGTGCTAACCAAGCCTCTCTTGTGGTTCAGGAAATAAACAGCCCAAGTGCCTTTGTGGCAGTTTGGGCCTTTGATTATTATTTCCCTGTACACTCTCCACGCTTGGAGTTTTATTTCCAGTGAGGGTTCTTCAGACGAAGTTAGCTTAAACCATGCGGGTGGAGAGCTCACACACATTTATCACACAGTCTTTGTTGAAGCATCTGAAAGCAAATCCCAGGAAACAGTCGTGTCTCCGTGTAAAGCACAGTCTGTGTCTTTGGCCTCTGTGATGTCGCTTAAAGAGTGGGCTTACTATCACCGTGGGGAAGAGAGCTTTGAGACGCCCACGCTGCCTACTCGACAGGTCCACGTGGGGCAGTTTCATCCTCCGCAGGCTGCCCTGTGGCACTCTGGAGGAGAGGGCCTGTTCTCACACTCTGTTTGGGTCAGCCTCTGCTGAAAACAACCACCCGTTTCTCTGAAGCCTAGTGACTTCAGGCTTAGTGACTTTTTAGGCTTTGCCTGATGGCTCATGGGCCTGCTGTTTGTTTGTTTGTTTGACTTGCCCTATGTAGCCACATATTAAAATCAACAATCAGGCCTGGTTCCTACTCCTTGTGGCTGTGTGCTGCTGTTGCTGGTTACCACTGCCCATGAGCAGGAGTGAGGATCCTGGAGCAAGAAACGGACATTCCAGCCTGAATTGCACAGGACCCCAACAAAGAGGCTTCAGGTAGGATCTAACCAGAATTTGTTTCTTCAGCCAATCCTCGTGAAAGGGTGCTCCCCAGTTCTTCAGGGAGAACCTCTGGAAACTAGTATCAGGACCTATTTACAGATTGTTGTGAATGCATGTGTATAGAACATTGTACATGGTTTTCATCCCAGAATGTGGGTTCTGCTGTTCTCAGCAAGCTCTCCTGTTATGTTCACAAGTTTCCAATCTTACGAGAGTGCGATGGGTATTGCTTGTGTAGGATCGATGTCTAGGCGGAGTATGTCCTATGTGGGTGATTCTAGTCAGGCTTCGGGCATTAAAAATGGGCAAAATGAGAGTGCCTCCGTGCAGAGTTGGGTCTAGGTGTTCAGTAGGAACTACTTGAGAGGAGCCATGATGAGCAACATGAGCTTTTGAGAGAATCTTGGGGATATTAACCCCCGGCCAGAGTCCCCAGCTTCAACTGCTCTATTAGCCTTGTGACCTTGGGCAAATCTTTTACCCATTTTGAGCCTGTGTTTTCTTATCTGTAGAATGAGCTATGATAACCTGCTTTTGCATCACAGATAAATTAGTGCTTATGATGGTACTTTGAAAACAGTAAAGCATCACAAAAATAAACGACAAAGGTGTAGCCTTGTTTAATTTGATCTGATTCAGTCTTCTTGTCAGTCTGACTTCTAGTCAGATTGTTTGGATGTCCTGGCACCTCAGAGGCAAAGAATCTGCCTGCAATGCAGGAGATCCGAGTTTGACCCCTAGGTCGGGACGATCCCCTGGAGAAGGGAATGTCCACCTACTCCAGTATTCTTGCCTGGAGAATTCCAAGGACAGAGGAGCCTGGTGGGCTACAGCCCATGGGATCGGAAAGAGTTAGACACAACTGAGCAACTAATTCAAAAGAAAAAATCTGAAACACCATATTTAAAATAAACACAGTGACACTGGATTAAGTTCATCCTCTGATTACAAATACATGAACACTGTAGAAAATTTGAAAAATAAAACAGCACAAAGAACAAAACCCACACACAATTTCACAACTACTTTTTGGAGTTTTATTCCTGTTGTCATTTTATATACAAATTTAGAATTGTTCTGGACATACTGTTTTTACTAAAAATATTTCATAAACATTTCTGCATCATTAAACGTTCTTTTGTAACCCGATTTTTAATGACTACTTAGGATGAAGCATCTGTTTTCAAGCTTGTTTAAATGCGATCCTTTGGTATGAAATTCGTACTTTTTAGTGGCTTAACAACTTAGTTTACTTGTCAGATAGGAGAGAAGGCATGAAAGAAGTCTTTAACCAGCCGCCTTTTTGTCTAACTGCAGGGTGCACAGGAGCAGCCAGCCAATGGTTAAAATTTCAGGAATTTGTGAACTGGCTGTTCAATTCTTGGTAACTTCAAATTGGCCAGGATTAGGAGCACAGACACAAGCAAGAGGAACATTCCAAGTATTGGGAATGAGCAGGACCAAATGTGACAAGATCCCTAAAATTTAGCCTTTGAGAATTAGCGATGAAATCAAAACACACACCATCGTGGGATCTTTGCCTCCAAGATCCTGACTTCCTAGTCTTCTTGACTGAGGTCTGCACTGCCAGAGAAAAGCAGGGCCTTGATGGTGTGGACAGCGAACCCAGATAAATTCAGGCCCCTGGCAGGTTCTGATTCCATGTACCGAGGTAGCGCTAGTTGTAAAGAGCCCTCCTGCCAATGGAAGAGATGTTAGAGAGGTGGGTTCAGCCCCTGGGTGGGGAAGATCCCCTGGAGAAGGAAATGGCCACCCACTCCAGTATTCTTTCCTGGAGAAGCCCACGGAGAGAGGAGCCTGGCAGGCCACAGTCCATGGGGTCACAAAGAGTCAGACAGTACTGAAGTGACTTAACATGCATGTAGGAGTATTTATGGAGAAGGCAATGGCAAGCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCCCTATGAGTCGGACGCGGCTGAGCGACTTCACTTTCACTTTTCACTTTCACGCAATGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCTTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTTGCACAGAGTCGGACACAACTGATGCGACTTAGCAGCAGCAGCAGGAGTATTTATACCAGAGAAATCTGCAGTTGCTAAAAGGCAGGATTACTTCCAGAGAGCTGCTTTCCCGGAATATTACTGTGTATTTTGAACCTCCCTCTCTACTGTTTGACTTAAAGTTTGAGAAGAGAAATTGACTTCTGTATTCAACACTCAAAAGACCAAGTCCTGAGATCTTTTTGTCTAATAAATATCAAATGAAACACTATCTTTTGGACTTTAGTGATTGGACTGTCAAGGTCTTCACCTCTTTTGAGGAAAAAAGCAAAATACCTTAAGCGACAAGATTATATATAAATAGTGACTGTTAGACACATCTGTGTTTGTTCCTGAATTAAGATAAATAACTGGACAGTTGCTTGCCTCTGAACAAGCAGAGAAAGTTCATCTGCAATCACTATTGAACTGAGAGACAACATTTACTCTTTAGCCCAGACATGTTCTGGATATAGCGATGGTTAATTTTGTTTAGTGAGAGCTAAGTTCCGTGTATAGGATGTTTTATTATCCAGGCCTTTGTTCACGATGGTGCAAGTGCAGCCAAGGCCAATCTACATAACTGTAGTCTCTCTGGAGTGTTTACACTTGTCTAAAATGTTATTACTAATCTGGGAGGCAGCATGAAGTGAGGGGATCTGAGGAAGTGATGTACTGGAGTCTGGAGTTTTATTGGCCCAAATGTGGTTTCGAAGAGAACTGGTCTCATTTCATTCAGAATTAGCTCCTACTGACCTCTGTGAGCTTGACAGAATTAAATTAACTCTATAACTTTTCCCCCCTAAACAATTACTACCATGGTTTCTAGATCCTCTATTTAATTTTATGGCAGAGAGATGGACAAAGGAATCTCTCAAGGGTCTTTTGAACCTTATAACTCGTGTAAGCTGAAAGGAAATCAGAAATAAAGGAGGGAAATGAGAATCCAGGAGCCAACTTGGAAGACTTGAGGATAATTTAGTTCTCTTTTTAACACTTTCACCTTCCTGTCTCAGGAGCTGCAAGCTTGTAATTTTGAAGACTTGAGAATCATAGAAGTTGCGGAAAAGTAAATGGGGTTCCCTGGTGGCTCAGCAGTAAAGAACCCACCTGCCAATGCAGGAGATGAGGGTTTGATCCCTGGGTCAGGAAGATCCATCTGCTGGAGAAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTACGGTTCATGGGGTTGCAAATAGACATGACTGAGCGACTGAACAACTACAAGATGTGTGTTTGATTGAATAACATTTTCCAAAGCAAATGCAAGAGTGTTATAATTTTGAAGAGAAATCTTATGAAGCCATCAAACGGTATTACCTGAAGGGGACAGATGGCTTACTTTTGACGGGCACATCGGCCTCGCCGGGGCTGGGTAACCTTTTTGTCCTTAGCGAAGAGCAGTCATTTACTGTGTAATCATTTGCTGTGCTCGGAGCTCCACCTAGCTTGTCTCACTCCATCAGAAAACCTCTCATGGAAAGCCTTCT EMBV3_04480 CTTCGGTTGAAGCGGCGCTGGAATGATGACCCTGAAGCCCTGAGTAAGAATGGCAAGTTT Gene GeneID:538995|ETV3:XM_002685961:7_cdna Constitutive 0 NULL GeneID:538995 3 GENE ETV3 NULL ets variant 3 EMBV3_39094 AGATGCAAAGCCTGGTGATGCAGAGTCGGGCAAAGGCGCAGCCTTCGTGTCCAAGCAGGA Gene GeneID:281646|BGLAP:NM_174249:28_cdna Constitutive 0 NULL GeneID:281646 3 GENE BGLAP NULL bone gamma-carboxyglutamate (gla) protein EMBV3_30097 ACAGTGCGATAGTGGCCAATGCCAGGAGGCTGAAAGACAGAGTTGATGAGAAGTTGACAG Gene GeneID:100140710|LOC100140710:XM_002695009:241_cdna Constitutive 0 NULL GeneID:100140710 18 GENE LOC100140710 NULL similar to fel d I chain 1 precursor with leader B EMBV3_32411 TCAGTGAAGCGCAGAGCAAGGAAAAGAGCTGTTGAACTCACACAACAGGTTAGCTGCGAC Gene GeneID:444881|MYD88:NM_001014382:35_cdna Constitutive 1 NULL GeneID:444881 22 GENE MYD88 NULL myeloid differentiation primary response gene (88) EMBV3_08253 TGGATGTTGGTCCACCGGGTCTGGTGCTCTGCCCTTGGGTGTGGTCGGCGTCCAGCGATT Gene BVT0102_293983 + 0 NULL GK000025.2:42294076-42306344 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145697 1 XLOC_088905 Coding TCONS_00145697 XLOC_088905 Coding Coding C25H7orf50 25:42234891-42305726 j TSS109121 2593 2 TCONS_00145697_6 197 0.0728885460856151 6 0.963477990795381 1.7113880386503e-312 3.18631251967319e-17 6.65720727511099e-51 1.83508483430877e-05 6.7200371299592e-189 4.31093980151707e-83 4.45794733802982e-42 5.82190590759655e-05 0.000276387272533146 3.53943289383449e-148 3.39300330347061e-41 2.36808408672787e-05 8.25066706329038e-06 8.91513778098054e-43 1.8817692840327e-34 0.000169674310400863 9.72803217866575e-56 0.000412329240490815 9.92104662039354e-05 7.63021480235844e-05 8.00132160755921e-88 7.72850773755007e-96 0.000124482240546036 0.000116077132853846 0.000496526996490578 1.79041308530945e-05 2.62898728875202e-05 2.49567341498763e-77 4.66869271915441e-67 3.12131845177361e-05 XM_005225122.1 C25H7orf50 PREDICTED: Bos taurus chromosome 25 open reading frame, human C7orf50 (C25H7orf50), transcript variant X3, mRNA. 0.0 2105 100.00 0.449672194369456 NM_032350.5 C7orf50 Homo sapiens chromosome 7 open reading frame 50 (C7orf50), 1e-111 408 81.95 0.16158889317393 TCONS_00145697_3 sp|Q9BRJ6|CG050_HUMAN CG050_HUMAN Uncharacterized protein C7orf50; 1e-60 191 68.72 0.994594594594595 1 coding 0 0 0 0 -3.28131310676499 0.0141885782552359 0.0467143743511822 0.488082482457532 GTAGGCGAGTGTGGCGCGCTGAGTGGGTGAGGGGGGGGTGTCCCCGCGTGGGCGCGGGGCCTCCGCGGCCGTTGGGAATGCGCGGGGGACCTGGCCGTCTTCCTTTCGGCGGCCTGCCGAGGGCGCGGGGACCAGGGCGCCGGCCTGGGGTCCCCTCAGCCCCCTGTTTGTCTGTTGCAAGATGGCAAAACAGAAGAGAAAAGAGAGCGAAGTGGCAGAGAAGAAGAGCAAAAAACTGAAGAAGGTGTCGGCTGTAGAGATGCCAGCGGCATGCGAGGCCCTGCCGGGCACCGGGACTGCCCCTGCCGAGGGGTCCGCGTCCCCGTCCCCGGAGGAGCAGAGGGTCCTGGAGAGGAAGCTGAAGAAGGAGCGGAAGAAAGAAGCACGGAGGCGGCTGCGGGAGGCGGGCGTCGCTGCGGCTCCAAGCCCAGCAGTCAAGCGCTCAGGGGCCGCTTTGGCCCTGGAGTACCTGTGCAGCTGGGCCCAGAAGCGCGAGGACTGGAGGTTCCAGAAGACGAGGCAGACCTGGCTGTTGCTGCATATGTATGACCGCGATCAGGTCCCTGACGAGCACTTCCCCGCCCTGCTGGCCTACCTGGAGGGGCTCAGGGGCCGCGCCCGAGAGCTGACAGTGCAGAAGGCGGAGGCGCTGATGCGGGAGCTGGACGAGGCAGGCGCCGGCGCCCTGCCTCCCGGGGGGACCCAGCGCGCCCGGCAGGTGCTGCAGCTGCTCTCCTAGCGGGTGGCTTGGGGGCACCTGGGCCCAGTGGACCCCAGCGAGGGCAAGGGCCCTGCGCCCTGGAGGGCCCGCCTCTCTCTCTCTCGATTCCTCGACCAGGGACTCTTTAGAGGGGATGACGAATTACCTCCTCCACGGTAGAACGAGGTCACTCTGAAATGACCTGGTCTCCCGGTGGCCCGCAGGCTCCCACGGACGGTGCTTTTTTCGGGAAATGTCTTATCTTTCTACCAGGACTATCCTAGAGGTCAGAGCTGGCCTTTCCTGTCAGCTGCGGCCCATCCGCGTGGGGGCGTGGCCCCCTCCTCCATCTGATGGTCCCTCCTGTGCCTCTGCTTGGCCACCTGCCTGCCTTCGCTGACGGCCGGGCTGGGGTCCATCGTGCCTACCCCTGGCTGTATTTCAGTAAAAACAGGCCCCTGGGGGCCATGGCTCATCATGTGACTTGTTTTCTGCCCAGGGTCGTGAGTGTGGGCTCTGTGGCCTCCCTGGGGTGATGTCTGGGGGAGCCCCTCGGGTGGAGCTTCTCACCATGAGGCTGACATCTGCTCTGCAGCCCGCATTTCCAGGCGCCGGCAGGGACCTAGCACTGCCCAGTCCTTGGTCCCCAGTGGAGCGCCCGTGTTCAGGGAGTGGCCGGGCCGCCTCAGACAGTTGGATGGATGTTGGTCCACCGGGTCTGGTGCTCTGCCCTTGGGTGTGGTCGGCGTCCAGCGATTGCGGACATGCTGCTGGGGCCGGGGGTGAGGTGACTGAGGACACGAAGCTGTGGTGCTCTGAGCCCTGGGAACCAAGCCCCCAAGATGGGCCACGGGGCATGGAGGTCACAGGTGGAGCTCCCACCTGTTCCCCACAAAGATTCATGCCTACTAGAGCTTCAGCCCAGAAACGGGGTTCCCAACTCTACCACGCAAGGACACCCCTGGGGTCACCGTGGTTCCCAGTCACGTCCGGGGCCTCTGCCCACCCACCCCCCAATCTCTCCGCTGTGCCCAGGGCGAGGCATGTTCTCTCAGCCCCAAATCCAACGCCTAGGTGTTTCAGACCGACAGGAAGAGGACACAGGACTGCCCTGGTGGTCCAGTGGTGAAGCATCCGCCCCGCCATGCGGGGGACGAGGCTGCAATCCCTGGCCAGGGAAACTAAGATCCCACCTGCCTCGCAGCAATTAAGCCCTTGAGCGCTGGAGCCACTGACGAAGCAGTCAGTGCACCACCACAAGTTTCCTCCTGACGGGATGGAGGCCCCGCGAGCTATGTGTGTGCTGACCGCTGTGTCCTGGGTCGTTCCATTTGAACCTCTGGAGGGAAACGCGCCTTGTCACCCAGTTCCTCACCCCGCCCCTGTCCTGCTCACCAGCTCACGCCCCGAGGGCAGCCTCCCCGTGTGGTCACCGACACTCAGCACGGGAAGGCCCTACGGCCCCAGCCGGGAACCAGGACCCCATGCCTCCCTCGGTCCTGTCGGTTCAGTCGGCGAGCTCTGAGCTCCAGGAGGGCGGAAACCATGCCTTGATTGCCTGTGTCCCACTCGCAGAGGTGGTGGTGGGCCGGCAGGGCTGTGATCTCGGCTGACCTCCTGCATGCCGCCCCCTGCCCCTTGACCCTCAGAGTGCGGCCTCCACCGAGAGATTAAGAGCTGGCTCGTGGGGAGGGTCCTGGGGGATTGTAGGTCAGGAGCTCTCAGAGGAGGCCTCCCTGCAGACTCCTACGACCCGCCCCACCCCAGCCTGGCTGACCCACTCTGGGCAGCGGCTCTCCCTCGACTGGCCCATGGCCCACAGGGCACCCAGGAGCCCTGAGAACAGGGTAGGGCCTGCAGGGGTCCTGGTGGGCCCAGGGCCTGGTGCAATGC EMBV3_01540 GCTGTAACTAAAACGAATCGTGCATTCCTTCCGGGACCATTGTCTTTGTTTTCTTTTTTT Gene GeneID:281201|GNB1:NM_175777:16_cdna Constitutive 2 NULL GeneID:281201 16 GENE GNB1 MGC129044 guanine nucleotide binding protein (G protein), beta polypeptide 1 EMBV3_17246 GAGATTTCTCAGGGTCGGAGCATGGCTGGGAAGAGGCATTCAGGCCTTGTTAAATTATTA Gene BVT0102_019370 + 0 NULL GK000012.2:31019184-31029403 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00039207 1 XLOC_023025 NonCoding TCONS_00039207 XLOC_023025 NonCoding NonCoding - 12:31022108-31023999 - TSS28708 1891 1 TCONS_00039207_2 63 1 0 0 5.31382252139713e-06 4.89370852676134e-06 1.31742210267044e-05 0 0 0 0 6.25870749237135e-05 6.74507486810925e-05 0 0 0 0 0 0.0010754568507285 0.00108867298990001 0.000636893259069696 0 0 0 0.000164816519091811 0.000295937135512805 9.75202223642208e-05 3.29752301613604e-05 0 0 1.52382002279716e-05 2.56721434111866e-06 0 XM_005213670.1 SLC7A1 PREDICTED: Bos taurus solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (SLC7A1), transcript variant X1, 0.0 3407 100.00 0.998413537810682 NM_003045.4 SLC7A1 Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (SLC7A1), mRNA. 1e-154 551 71.10 0.605499735589635 0 noncoding 0 0 0 0 0.0522368261098466 0.653549806542662 0.0241400894101474 0.636922320136984 TGAGTTTTTAGAAACCCAGAGGTGGGGTGTGATAGAGCCATGGTCGAACGACTGCTGCTTAGTTGATACAGTATCAGCATCACTTGCATCTCCCCCGCTTTGGGTTTTGTTCCATTGAGCCCCTCGGTCTCCATCAAGTGATCGACCACCTGGTCCCGTGGCGTTTGGATACCCGCAGGTTGACTACAGCCTTGTGGGGCTTCTCTGCCCACCCTGAGCCCCCCGGGGCCCTTGTCACTCCCTTCTGCCCCTTGGTCACATCTGTTCTCACCGGGAGGGCTGCAAGCAGGAGCCTTGCGCTTGTGTTTGCTGTTTTGTGCATGGGGTGAGGGGGGGTGGGGAATGGGAACCCAGGCTGGGCTAGGTCTCCTCCCCGCCACCCCCACTGCCAGGCGGGTACGGTGAGCTGACTGGGTCCTGCCTAGGATGGCGACTAGCCTGACATTGGAAGCAGATCCGTCAGCACAGGATGTGTGGACACAGCTTGTAAAAGCCCCACCCTGTTGCAGGTGAGCCCACGGGTACTCGGGGGCCTCGCTGCTGCAGAGAAGAGGCCTGGCCCCGCGCCAGGGGTGGACACTCCACTTTGACACACTAAGAGCCGCTTGTTCTGTTGACCCCTGAGAACCACCCCCATGGAGACCAGAGGGAGCGGCTTCATGCCGGTCCGTCGCCCCAGTGTGTGAGTATGGACAGAGAGGCAGGGCTGTGGCATGTCCACGCAGGTGTGTGAATTCAACTTCAGATGGAACTAAATATGTGTTGTGTATAATTTTATGTATAATTTAAAATATATTAATATCTGTCTGCCTTGGTAATGAGAGCATTATGTAAGGCTCCTTAGTGGGAGCGAGATGTACAGTTTATCAGACTCTTGTGGACTTTTTGGGGGACAAAATGCTTTATTGATCCAGTGGTGCAAGAAGCTACAAACACTCCGTATCTCATCATCGTAGTTATGATGCCTAATGGGTGGTTAAGGCGAAAAAGAAAAAAAAGTCAACTGACCTTCCTGTTCATCACTATGATCCAGTCTTTCTGTGCCCATTGCTTCACTGGGTGGCAGTGCTCTTTCAAGAGGAAGTGGACCAGCCAGGGGTCTCGGGGCGCAGTTCTCAGGAGCCCCCCCTTCTCCAGGACCACCCTGTGAACGTGCCAAACTGCTGGCTGAACACACCACCGTGAGACCTCGGCTTGAAGTCCAAATGAGATTTCTCAGGGTCGGAGCATGGCTGGGAAGAGGCATTCAGGCCTTGTTAAATTATTAACAAGGTGTGTATGATGTTGTGTTTCTTGATGACAAACTTTTTAAGTTTGGGACTTATTTTCCCATTGGAGAAGTTTATAATATCTATTTAAGATAAGTTTCCTGCTTACGTTGTGCCTTTAAGCGTGGATTAGTCTAAGGAGCACACAGGGGTGACAGTCTCCACGAGGGTTGGTTTATTGTCAAACCTGAAGGTGTGTGGGTTCTCCAGTGTACTTTTTCTTCTACTGAACATGGAGCCATTATTAAGAGGATTGTGTTTTTTATTATGTAAATTGTGTAATATTTTTTTGCTCGTTTGATGTTCTATTTTTCTAATAGTTTTCTTATAGTTTCTTATAATTGCAATACTAGATTTAGATTCTGACAGCTAACTGCAAATCAGATTGGCCTCTGCTGGTCCTCTCGCCGTCCCCTCATACCTCCCCCTACCCCCACCCCCCATTTTTATTTTAAGGACAAAAGTAGACATTGTCCATTGCCTTTTAAAAATGTGAACCTGTGCTCTGTATCCCAGTTTTGCTGGTACATTGATGCCATAATAGTTCATGTTATAAAGTCAAACTTTGTTGGTACATCCCGTCATGCTTCTGCAAATCCTAATAAACTCCCATCTACGGCCCT TCONS_00035053 TCONS_00035054 TCONS_00035055 . 3' 2926 TCONS_00035053 TCONS_00035054 TCONS_00035055 . 3' 4816 EMBV3_04510 AGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTC Gene BVT0102_051712 + 1 EMBV3_02781 GK000016.2:39421013-39505887 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00200933 TCONS_00238445 TCONS_00010779 TCONS_00253025 TCONS_00199803 TCONS_00115687 TCONS_00152859 TCONS_00210177 TCONS_00199063 TCONS_00176249 TCONS_00165813 TCONS_00186108 TCONS_00248863 TCONS_00249283 TCONS_00252354 TCONS_00009883 TCONS_00008225 TCONS_00135547 TCONS_00010052 TCONS_00239219 TCONS_00251930 TCONS_00218899 TCONS_00175545 TCONS_00040583 TCONS_00055867 TCONS_00117484 TCONS_00116666 TCONS_00021596 TCONS_00040195 TCONS_00065249 TCONS_00157488 TCONS_00123618 TCONS_00238457 TCONS_00032143 TCONS_00190323 TCONS_00207068 TCONS_00152628 TCONS_00177280 TCONS_00072815 TCONS_00206861 TCONS_00250580 TCONS_00062743 TCONS_00253665 TCONS_00019962 TCONS_00133066 TCONS_00020724 TCONS_00048558 TCONS_00063180 TCONS_00245928 TCONS_00153219 TCONS_00185807 TCONS_00162783 TCONS_00030942 TCONS_00088087 TCONS_00223462 TCONS_00124584 TCONS_00176254 TCONS_00056728 TCONS_00142124 TCONS_00157440 TCONS_00006827 TCONS_00189890 TCONS_00022065 TCONS_00250881 TCONS_00064461 TCONS_00007719 TCONS_00238326 TCONS_00201733 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00066285 TCONS_00179470 TCONS_00222115 TCONS_00056147 TCONS_00054954 TCONS_00154085 TCONS_00070840 TCONS_00063487 TCONS_00251915 TCONS_00047158 TCONS_00250938 TCONS_00050046 TCONS_00176255 TCONS_00020010 TCONS_00124110 TCONS_00249570 TCONS_00048821 89 XLOC_006139 XLOC_131641 XLOC_122583 XLOC_145112 XLOC_006330 XLOC_155966 XLOC_121455 XLOC_069856 XLOC_092624 XLOC_128687 XLOC_120716 XLOC_106028 XLOC_100653 XLOC_112161 XLOC_151806 XLOC_152226 XLOC_155295 XLOC_005436 XLOC_003783 XLOC_081770 XLOC_005604 XLOC_145885 XLOC_154871 XLOC_132218 XLOC_105326 XLOC_024399 XLOC_033675 XLOC_071650 XLOC_070832 XLOC_012269 XLOC_024012 XLOC_039971 XLOC_095943 XLOC_075170 XLOC_145124 XLOC_018386 XLOC_116358 XLOC_125587 XLOC_092393 XLOC_107054 XLOC_044583 XLOC_125381 XLOC_153523 XLOC_037470 XLOC_156604 XLOC_010640 XLOC_080989 XLOC_011399 XLOC_028690 XLOC_037907 XLOC_150855 XLOC_092984 XLOC_111860 XLOC_099664 XLOC_017192 XLOC_052874 XLOC_136762 XLOC_076128 XLOC_106033 XLOC_034531 XLOC_086549 XLOC_095895 XLOC_002389 XLOC_115927 XLOC_012736 XLOC_153824 XLOC_039185 XLOC_003279 XLOC_144993 XLOC_123378 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_040999 XLOC_109243 XLOC_135424 XLOC_033950 XLOC_032763 XLOC_093846 XLOC_042617 XLOC_038214 XLOC_154856 XLOC_027294 XLOC_153881 XLOC_030177 XLOC_010688 XLOC_075662 XLOC_152513 XLOC_028952 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_32206 AGCGGGTGTGAAACGTACCAAGTACAACCAATATGACTCGATGATTCTGCCCCTACAGCG Gene GeneID:100299659|LOC100299659:XM_002683962:2_cdna Constitutive 0 NULL GeneID:100299659 Un GENE LOC100299659 NULL hypothetical protein LOC100299659 EMBV3_29792 GTTTTGACTTTGAAACAGCAAAGGGTTTGGAGTCAGAAGCCCCAGGTTTCCAGCCTCTGG Gene GeneID:100335289|LOC100335289:XR_083983:331_cdna Constitutive 0 NULL GeneID:100335289 19 PSEUDO LOC100335289 NULL SNRPF protein-like EMBV3_32668 ATTAATTCACACACCATACACCCGCTTTGAAGGTGTGGGTATTGTCCACCCCATGAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11428 GAGCTGGAGGGAGAATTTCAGGAACTGCAGAATTAAAGGCTGGTGGGTGTCTCACCACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41059 TTTAGACACACCAAAACAGAACATGCCAAATGAGTGCCTTTCGGAGGCTGGAGAGGAGGG Gene GeneID:522967|MYO1D:NM_001075838:256_cdna UTR3_Alt 2 NULL GeneID:522967 19 GENE MYO1D KIAA0727 MGC137743 myosin ID EMBV3_11546 TGGGGCCCTAAAGGGAGCTGTTGATGGAGGCTTGTCTATCCCTCACAGTACCAAATGGTT Gene GeneID:784446|LOC784446:XM_002692135:107_cdna Constitutive 0 NULL GeneID:784446 13 GENE LOC784446 NULL similar to 60S ribosomal protein L5 EMBV3_30712 CCAGAGATATTTGGGGCCCTGGTATGTGTACCTGTGTATTTATCTCATGATCCTCCTGAC Gene BVV0101_002349 - 1 EMBV3_01195 GK000001.2:148347074-148566629 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36797 GGGGGTGAGAAAAATGAGAGCAGGTTTCCCGCAAAACATAGGCTGGGCACAGGGACAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23798 ATGGACAGTAACACTCTCATGGCCACCACATATACAGTCTTCACCCCCTTTCTTAGCCCC Gene GeneID:614095|LOC614095:XM_002688592:322_cdna Constitutive 0 NULL GeneID:614095 7 GENE LOC614095 NULL similar to olfactory receptor, family 10, subfamily H, member 3 EMBV3_07402 CCAAGGAAGTAGTCGAAGTCGCCAAGCTCGAAGTTACTAAGTCGACTGGAGAATGTTGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24047 CCTCTGACATTCATTGGCCATCAGGATACACCAGGAATCGGTAACATACACTCAGGTGCC Gene GeneID:785267|CCDC84:XM_002693129:565_cdna Constitutive 3 NULL GeneID:785267 15 GENE CCDC84 NULL coiled-coil domain containing 84 EMBV3_04524 CCTAGGTGAGTTTTTACCTAATGATGACACATTTGGGAGACTGCAGAATTTTCCACGTCG Gene BVT0102_187203 - 0 NULL GK000004.2:49052389-49058938 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181562 TCONS_00181565 TCONS_00181563 TCONS_00181566 TCONS_00181561 1 XLOC_110633 Coding TCONS_00181561 XLOC_110633 Coding Coding CBLL1 4:49037004-49056108 j TSS135855 6283 1 TCONS_00181561_7 452 0.0444055387553716 7 0.671465214887714 0.00165859398849611 0.00177121567196423 0.000999169983989702 0.000393923936059659 0.000108087995904298 0.000516399363374862 0.00113899931974327 0.00103252790984449 0.00072726829980707 9.96012497109733e-05 1.76474633251149e-10 2.37788727123322e-22 5.00221269494914e-09 0.000269951470230549 0.000476308043820998 8.40503595089993e-06 4.08355173342757e-05 0.000372934228727459 0.000163361502661529 0.00175463934779022 0.000623476954515063 6.20130237439689e-39 1.74225340745137e-25 2.7818076780776e-05 0.00131822738577772 0.00110141744175963 0.000593972017474251 6.04489237272418e-09 5.2238251622891e-10 1.30723478494284e-05 XM_005205418.1 CBLL1 PREDICTED: Bos taurus Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 (CBLL1), transcript variant X1, mRNA. 0.0 4937 100.00 0.435460767149451 XM_005250603.1 CBLL1 PREDICTED: Homo sapiens Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase (CBLL1), transcript variant X3, mRNA. 0.0 2975 84.10 0.435460767149451 TCONS_00181561_7 sp|Q75N03|HAKAI_HUMAN HAKAI_HUMAN E3 ubiquitin-protein ligase Hakai; 0.0 637 97.02 0.741150442477876 0 coding 0 0 0 0 -0.0523583104527144 0.766942488717022 -0.0192985711166783 0.825419493319196 AATGGGTTTCAACTGTTAGCAACTTGAGAGATGGGAACCGGGGTAGATACCCAAGTCAGCTCTGCGTGGGTCTGTGCAGCTCATCACGGCAAAGCAAAATGTAGACATATATGCACAGAGCTTTTCTCTCTAGCTGGTAGCCTTACACAGCTCAACCGTCCCCTAGGCAACCTCCCGCTGGAGGACGCTTTCCGGAGCGCGCGTGTTTACACTCTTCCTTGACCGGGGGGTGCCGGAGAACGCAGCTCGCGGACTCTGGGGGATTCCAAACCGTTACTCCGCCCGCCGGGGTGGGGACAGCCCAACGGCTGAGCCTGCGCAGTTGGGCTAGGTCGGCACCAGGGTCCCGGCCGGGGGCACTACAAGTCCCAGAAGGCAAAGCTCCGCGCGGGGTTGGGGGTGCGGCGGTGCGGGGCGCGGCGGCCGCCTTACCTGCCGCGAGCTTAGTCCTCCGGCTACTACCGGCTCTCTCCCTCCCCCGTTCCCGTCAGTCTCCGCTCCACATTAAAAGTCTACTTCCTCTGGAAGCACAAGAGAGGAACCTTTAGCAGCCTCTACACTGACGCTCCCCGCGTACTCGCTTTTTCTCTCTCTGCCCGAACTGAGCCTGACTCCCTCACCGGAGTCGGCTAGCGGACGCAAGAGAAGGGAACTTTTGGAGGGAACCAACCTGGTTTCACCTGACCACACTTCCGCCTCCCGGGCTCCGGAAGGTACCGCGCACGCGCTCCCTGCGACTCCGGCGCGGTTGACTTCCGCTCCCACTGTGCCCTGCGAGTCGAATCATGGATCACACTGACAATGAGTTACAAGGCACTAATAGTTCTGGATCATTGGGTGGTCTTGATGTTCGAAGACGAATTCCTATAAAGCTCATCTCCAAACAAGGGAACAAAGCCAAAGCTTCACCTCGAACTCCAAGGACTATAAACAGGATGCCTGCAAAGGCTCCAGCTGGTGATGAAGAAGGATTTGATTATAATGAAGAAGAACGGTATGACTGTAAAGGGGGTGAACTGTTTGGAAATCAACGAAGATTTCCTGGACACCTTTTTTGGGACTTTCAGATAAACATCTTAGGTGAAAAGGATGATACTCCAGTTCATTTCTGTGACAAATGTGGATTACCTATTAAAATTTATGGGCGAATGATTCCATGCAAGCATGTGTTTTGCTATGACTGTGCTATTTTACATGAAAAAAAGGGAGATAAGATGTGTCCGGGCTGTAGTGATCCTGTGCAGCGAATTGAGCAGTGTACACGAGGTTCTCTCTTCATGTGTAGCATTGTTCAAGGGTGCAAGAGAACATACTTGTCTCAGAGAGACTTACAGGCTCATATCAACCACCGCCACATGAGAGCTGGAAAACCTGTTACCCGGGCTTCACTTGAAAATGTTCATCCTCCTCCTATTGCCCCACCACCAGCTGAAATCCCCGATCGTTTTATCATGCCGCCAGACAAGCACCATATGAGCCATATTCCGCCAAAGCAGCACATCATGATGCCACCACCTCCTTTGCAACATGTGCCCCACGAGCACTATAATCAGCCACATGAGGATATTCGTGCTCCTCCAGCTGAATTGTCCATGGCTCCACCTCCACCTCGCTCAGTCAGTCAGGAAACCTTTCGTATTTCAACAAGAAAACACAGCAATTTAATAACTGTCCCTATTCAGGATGACTCAAATCCAGGTGCTAGAGAACCACCACCTCCTGCCCCCGCACCTGCTCACCATCATCCTGAATATCAGGGTCAACCAGTGGTCTCGCACCCTCATCATATTATGCCTCCACAGCAACATTATGCACCACCCCCACCTCCTCCACCACCAATAAGCCATCCAATGCCACCTTATATGAATCATCCTCCTCCAGGACCTCCCCCACCTCAACATGGTGGTCCACCTGTAACTGCACCCCCTCCTCACCATTACAACCCCAACTCTTTACCCCAGTTCACTGAAGATCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGGGGAATGAGTCCTGGTATATGGCCTGCACCAAGAGGGCCACCTCCTCCTCCACGAATGCAGGGTCCGCCTTCTCAAACCCCACTACCTGGACCACATCATCCAGATCAGACAAGATATAGACCGTATTATCAATGATAATAGTATTCTGAACTGATGATATGATGAGGAAACAAAACTTATATGTATAGTCAATCTTTTCTTTAAGCTTTGACTGTTCGGGGAAGGAAAAGCGCCTCTTACTGAGGTGGCTATACAACACTTAGGGTCTTGTCTCTTAAAATGGTTTTAAATCTTGACCTTAGGATTGATTTCAAGTACTATACTGTAGTGCAGTTAAGTGGCTCAGTTGAGCACAGCTATATTTTAAGAACTTTGTTCCCCTAGTGTGGTAAATTGACCCAGAGGTAACCATTTGTAAGAAGAAAAAAAAATTGAAAACATTTTTCCATTGTTACACTTTCAAAAGTACGTCCTTTGTTAAACCCAATGTTTAAGTTTTTCTTGTGATACATTTTGTTAACCTGTGTAAAAGGATTAAACTTCAATATGGTTGTAAAAATGCTATTTTTATGTGAACTTAAGTGCAGCCACATACTGTTTTTTAAACCATATGTTTTACCACTAATTTCCCAAAGTTACAATAAAATCCTAAAAGTAAAAATCTAATAGAAATTTACTGTAAGGCAGACTGTTAAATGGTAGAAAATTATTTCACATTTTAGGCACTGAAATTTTGAGGTATATTAGGTATATAATGCACTTCACTTGGATGCCTTTTCATTTATAGGCAGCTTCAGGAGCACCAAAATACATTGAAATTCCAGTACTAAGAATATTTATGTCTGTAATGTTAAGAGGCATTGCTTGTATTTTTGGAAAGATAGGGCCAAAGTAATCAACTCTGTAGGCTCCAAGCTGTTGGGGATGCTGTTACTCATTAATGCTTTTTACCGAATGGTTGGAGTCATATGATGCATCACACTTTAATTAACCTTAAGTAACATTTTATAGAACTGTATAAGTGGTATTCTTTAGATGAAGTGTGTTCCTCTCTGCTCATTGTCTGAAACTAAATATTTAGGGCTGAATAGGCTTTATGTAATTCCTCATTTCATGGTAGAATTTGATCCTGTACTTAAGTGGATTCTTGTTTATTGGGTTTTAAAGTATAATTTGAATGCCATGGAGGAATTTGAATACTGTATTAATGAAGGATGTTCTTGTAATCACATACTTGCGTTGCTCAGGTTTCATTACTGTATGATAAGGTGTTTTTCTCTAACTTAACTATTACTGACTTCCTGTTTCTTTTATTGGTTAAGCAGTCTAAAACTTGGAACATTTTTTTAGCAGAGTCAACAGTGAAGACTACCAGATGATTTTGTATTGAAGAGAAAAGTAATGTCTAAATTGTGAATTTCAATGCATTATAAGGTGCCTTCGGAGTCAGCTTTTGCATTATAGGGGCTTGTTACAGTCCAGCTAAGATGACCACTTACAGTTTATACAGAATTCATATGTATAAATCAACATTCTTGGGATATTACTATATATCCTTTGAATACACCCCTGTGAAGTACTTCCTCCCCCCCCAAAATGGTGCATAACATAAACATGAAATGTGTAGTATACAGATACCGTTTATTATTAAATAGTTTATAGTGTATAAATTTAGAACATTTCTTTTTGACAAGAGGTGAACTGATGGCTAATTTACCATTTAATTCTGTCAGAAACAGGCAAAGCAGTTTCTCACTTTGGATAACTGATACAAAGTCATCTATAAATTTAGAGCTGAAATAATATAAATGGCCCTTTCAACCATGACCAGCTGAAAATAATACACTTTTTTTTTAAGTGAAAGTACGTGATTTTTCACACCTAGCAATTTGAGAGTTCAGTGTTAATGTGGTGTTTCTAATGAGAAATTGTTACTAGAAGCATAGGAGTGAAATAGTGTGAAATGGTGGTGAGTGTGTCTATCATATTACTGTAGGTACTTGGACTGGTGCAAACTTGATTACCTTTAATGGCCCTTTTTAGGAGCTGTTAAAATATTATTGAAAATTCAGTACCAATAGTTTGGTTTCATGTAATAGGAAATAACAAAACTTACTTTAAAGCTTCTCAGCTATTTATGAAGAGCTCACCTGACTTAATTGAAATTCACTAGAATGTATTGAACAAAAAAATGTTATCACGGTAAAATTCCACATGTTAAGTCTTGTAGGCTTTAAAATATTTGGTTAGGTTTAAGAAATATGTGTTATGCAGGGAGGCAGTTCAGATGAATGTGTTGTAGCAGACAGTTTTTTTTTTTTTAATGGTGTTAGACTTGAATTCATCTAGTTATTGTTTGAATGAGGGTGGGTGGGTAGAAGGATAACAAAATTACTGTTAGTGTTTCTTTCCTTAAGGAAAAAGATGTGAATCCCAGCCTTATTTCAGGGAAGCCTTTGAAGCTATGATGGACGTAAGTCTAAATTAAATGTATGTATGTTTCATTATATTGCTCTTAAAAGACTACTGAGGTGGCAGTTTAATTCTTAAAAACAATAAAATGAAAGCATAAATACTATTTTGCCTAGGTGAGTTTTTACCTAATGATGACACATTTGGGAGACTGCAGAATTTTCCACGTCGATACAACTTTTACAGCAAAATTTCACGTTTTGGGAGATTAAAACCAGCAAGGTGAACGTTAATATTTCTAAAGTGGCATGCTTGTTCAGAGTATAATATATAGTATTGGAGAAAATTATCAGTTGCAAAGATTGTAAGAAACTACTTAATATTCATTTTGCCCTGTAAAAAACCACTTGCTCAAGTTATTGTATAAGAGACTAACACTAAAACGCAAATGGAAAAGATAATTTGACCGTATTTTTAAACTTGAAATAGGTCATTTTATGATATGAAGTATACAGAGCTGCTTTTGGCTTTGTTCTGATGTACTCGAAGGGTATCTTTCATACGTCTTTTTGGAAAAACCATGTAAACTTATTTTTGAAAAAGCGTTAATGGAAAAAAAAAGTATGTGGAAAAATCTCAAGTACCTGAAACCAAAATACACTTTTCTGATTATTAGATCAACCATCAAATTGGTATATTGATGTTAATTGAGGCTTGACATAATCATACTATATTCTAACTGAAGTGGATTTATTTTTCTTTACTGGTTTGTAATTGTAATCTGTTCAGTTGTGGCCTAGACCAAGCAGACTTTACGTACTACAATATATGCACGATCTAATAAAGCAATATTGGATATACTAGACTTAAAGGGGAAAGAGAGGTAAGCCAGGTAAAATACTTGGTAATAATACTAATAAAAATATTTGAATTTTCAAACATTTTTTGTTTTGATTCATGCCCCTTCAGTTTTCTGACTTTGAGGGGAAAACCGTTAAGGCAGAATTGTTAAAGCAACATTTTAATATTAAACTTTAATTTCCTCATCTCCCTTTTGAAATTTTAGGCATTACAGAATCACAGGATTTAAATGAACAGTGGTGGGTCATGAGTTTTTATCACTTGGGCAGGACCGCGTCTTTCTAAAAATCTAGCCTATGTCTTCAGAATATCCTTTTTCTAGTCTAAGTTAGTTGTAAGCACCAACTTTAATACTGTATTTAAGTCTATTTCTTATTAATCTAGTCTTTTTTGGTGGCTCAGTCAGTAAAGAGTCTGCCTACTATGTGGGAGACCCAGGTTCAATCCCTAGGTTGGGAAGATTCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAGTCCCATGGACAGAGGAACCTGGTAGGCTACAGTCCGTGGGGGTCACAAAGAGTTGGACACGACTGAGTGACTTAACACTTTCACTTTTTCCTGTTAATTTACCTTTGAAATTGTTCTCTGTCTTCACATTGAAAAATCTTACTCCCTTTTACTTTTCTTCCTATGTGTTGCTTTCAAAACCTTTTAATTTTTTGTTTTAAAATTTGTATTCATTTCAGTTATACAAGCAGTAAGTTTTGGGGAGAAATATGTCATATTACAAATAAAGATCCCCTCGACCACCACCATAATTTTCCCTTCCAGAGATAACCACTGTTATAACTTTGGTGTACAAATCATGTTAGTTGCAGAGCTGACAACTAAATAATAGGCTTCATGCTCTGGTTAAGCACCTTAATAATCCATGGTAAGTAGTATTTCGTGGCCTGTACTCAGATACATACTGAACATCCATCATGTGAAATATATTCATTTATATGCTAGATGCCAC EMBV3_03448 GAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTACTTATCTAAGCAGAGAAT Gene BVV0102_121945 + 0 NULL GK000030.2:36820542-37053727 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118459 TCONS_00220566 TCONS_00118040 TCONS_00238581 TCONS_00210913 TCONS_00091313 TCONS_00206511 TCONS_00252081 TCONS_00040258 TCONS_00148960 TCONS_00250203 TCONS_00250903 TCONS_00031886 TCONS_00110425 TCONS_00123823 TCONS_00071631 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00211020 TCONS_00174807 TCONS_00232829 TCONS_00140861 TCONS_00176419 TCONS_00250681 TCONS_00022895 TCONS_00063194 TCONS_00107436 TCONS_00078426 TCONS_00170890 TCONS_00174805 TCONS_00023655 TCONS_00171428 TCONS_00207933 TCONS_00010280 TCONS_00174806 TCONS_00188145 TCONS_00091299 TCONS_00118487 TCONS_00125692 TCONS_00175566 TCONS_00002600 TCONS_00031759 TCONS_00103962 41 XLOC_105290 XLOC_072622 XLOC_133883 XLOC_072206 XLOC_145248 XLOC_129423 XLOC_056088 XLOC_125033 XLOC_155022 XLOC_024074 XLOC_090838 XLOC_153146 XLOC_153846 XLOC_018131 XLOC_066329 XLOC_075375 XLOC_043401 XLOC_151107 XLOC_104695 XLOC_129530 XLOC_142312 XLOC_085290 XLOC_106197 XLOC_153624 XLOC_013565 XLOC_037921 XLOC_063346 XLOC_047314 XLOC_103679 XLOC_014322 XLOC_103815 XLOC_126448 XLOC_005831 XLOC_114188 XLOC_056074 XLOC_072644 XLOC_077234 XLOC_105347 XLOC_000643 XLOC_018004 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_30930 ACCCTATGCATTTTCCCATCTGTGGGTCAAGGGAGATCCACCATTTCTTCTGTGAGGTCC Gene GeneID:522560|LOC522560:XM_002689155:166_cdna Constitutive 0 NULL GeneID:522560 7 GENE LOC522560 NULL similar to olfactory receptor Olr1415 EMBV3_28195 CTGTGGCTCTCTACTGAGAGCTCACTGTCCAGATAAGCTGCATGTGACAGGGGGAGACCT Gene GeneID:504912|TOM1:NM_001035015:10_cdna Constitutive 1 NULL GeneID:504912 5 GENE TOM1 NULL target of myb1 (chicken) EMBV3_42923 CTTCAAAAGGTACCATGGTCTTCAGACTCTGTATCTCAGTCATAACAGAATAACCCTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42622 GTTCTTGCCATACTTTAAAACACAATCATGTGGCCCTTTCAATATTTGAACAGCTGGGCC Gene GeneID:533664|AP1AR:NM_001081532:65_cdna UTR3_Alt 3 NULL GeneID:533664 6 GENE AP1AR MGC155012 adaptor-related protein complex 1 associated regulatory protein EMBV3_13898 CCATAGAGATAGACAAGAAGGTCCTTGAGCAGCCTCTTGAGTTCCAGGAGCATACAACCT Gene BVV0102_173275 - 0 NULL GK000015.2:42754654-42759304 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061328 TCONS_00061322 TCONS_00061325 TCONS_00059133 TCONS_00061320 TCONS_00059132 TCONS_00061321 TCONS_00061324 TCONS_00061326 TCONS_00061323 TCONS_00059131 TCONS_00061327 TCONS_00059129 2 XLOC_036954 XLOC_036269 Coding TCONS_00059132 XLOC_036269 Coding Coding RNF141 15:42719646-42758748 j TSS44413 5673 1 TCONS_00059132_1 102 0.0437158469945355 5 0.85504207053528 0.00380278249048036 0.0055110543969066 0.0020357291568951 0.00193933195587214 0.00226297020306805 0.000793249269907097 0.00155101298839331 0.000798601508701807 0.0022519166295018 0.000992913348827701 0.000286192887375281 3.39088797338156e-05 0.000495098936366635 0.000257045757357835 0.000803544800557528 0.00137960922662864 0.00499838082782314 0.00148593001852 0.00550135909487643 0.00450483826585785 0.00145092353732437 0.00023271046896072 0.000858228753949613 2.89760157276884e-37 0.00592108003255131 0.00410678689886398 0.00311871814604116 3.65349081870938e-32 7.95760891824616e-05 0.000517082078088746 XM_002693100.3 AMPD3 PREDICTED: Bos taurus adenosine monophosphate deaminase 3 (AMPD3), 0.0 6403 100.00 0.625594923320994 NM_016422.3 RNF141 Homo sapiens ring finger protein 141 (RNF141), mRNA. 0.0 987 78.18 0.217521593513132 TCONS_00059132_1 sp|Q32L15|RN141_BOVIN RN141_BOVIN RING finger protein 141; 1e-64 199 97.98 0.96078431372549 0 coding 0 0 0 0 0.0130422277041854 0.946784001868184 0.0040127064184682 0.939001820476886 CTGCCGCCGCAGTTTCTAGGCCTCGGCTTAGGGAGAGGAGCTGGCTTGGGAGGCCCTTCCATGGTCGCACTGTCTCTAACCCGGTGGTTTCCAGTGACAGGGCGTTGAAGTGGCTCGTCCCGTTTGGGGAGGGTGGTTCTGGGGGACCAGGAGAGGCTTTTTCTCCTCGAGCGCGGATCTGCTTTTGAATATTGCCGCCGGCGCAGTCAGTCAGCCAGCGGACGTAGCTGTTGGTTACGAGTGCAGAAACTATGTGAAGCAACACTCTTTGGATTTCATAAGACATCATCTCATCATGGGACAGCAAATTTCGGATCAGACACAGTTGGTTCTTAACAAGTTACCAGAAAAAGTAGCAAAACATGTCATGTTGGTTCGAGAAAGTGGCTCCTTAACTTATGAAGAATTTCTTGGAAGAGTAGCAGAACTTAATGATGTAACTGCTAAAGTGGCTTCTGGCCAGGAAAAACATCTTCTCTTTGAGGTACAACCTGGGTCTGATTCCTCTGCCTTTTGGAAAGTGGTTGTACGAGTGGTCTGTACCAAGATTAACAAAAGCAGTGGCATTGTGGAAGCATCACGGATCATTTCCGGGGGCTTCTGAAACACTGTTACTTTTCAGGGCAAGAGTATTCTGGAATCTATTTAGTTAGGTTTAAAATAAACCTTGAATTTTAAAAAGTTGTAGCCATGTGAGAGAAAATCTTAACTGAAAATGTATAATACATCAGAGTGCATGTTACTACTTAAATTAGTCTTTCTGCTGGGATCTAAGGAATATGTATGCCCCCTTGTGGTTGACTATTGCTCTTTTAATAGTTTGTACTTGAAATAAGCCCTAATTATTTCCTAACTTTAACAGTGTGTTTTGGAACTACATGTTTTTTAACTTAAGTGTTTTTTCCCCCCATGCTGTGTAACTTGGGTGAAGACTATGAATTAGGGCAGGACTTTGCCTTGTAAATGGATTTCTGCTGGGGAGTCTTCTTGGCTATTCTAGAAATGCTTTCTTACAGCTGGGAAACTGTTCTAAATAGCTTTTGGTAATACTTATTCATCCTGGAGATTCAGATGGAAGTTTTTCTTCATCATAGACCCTAAATTTTATGTCCAAATTATGATAAGTCTTTAACATTGGTTATGGTGCTTTTATTTTCTTAATTTGAAGGCATCTTCCTGAGGTCCCAGAGTCTTCAAATTTCCTAGATTAAGAAAATAGTATGTAGCCTTTTAACCATATGTACACAAAACACCCCTGAAAATTAGGAGATGACTTGACTTTCTCTTTCACTGCATTTCATTTGAAACGCCAGGAAAGAGTATAGATATGGTGTTCAGCAGCACTTGAGCCATTTTTTAAAATTTTTGTTGATAAAGTAAAATTTTATTTTATGCTATATATTAACATTTCAGCATATAATAAACTAGGGCCTGATGTCTTTAAAAGTGTTTTAACATTCCACATAATTTTCTGATTTATTATTGGTATGTTACTATTTTCTGAAATACCAAAGCATACAATTTAAGTTGCTGCTTATTGACAGCAGAATTTTTGGATACTGGGGACTTTAATCAGAATGCAAATTAAGTAATTTTTCGGAAAAATGTCTGACCAAATGTAGCTTGGATTTTACCCCCTAATATAGTACTAATAATTGGTTTACTTTCCTGATGGAGGCAGCTGTTTATACAAGAGGAGTACTGGGGTCTCTGTCCTATCGACCTGGCAGTGCACTTGATGGCTGTGAGACCTGAGAAAGCCCCTTCCTCTCGTTTGCAGGCTCTTTAGAAACAGACTTTATCTGTGGTATTCACACTTTCTTTCAGCAGCAGAACTTTTTTCCCAAGTAAAAATTATACTCAAAATCCCTACACACACGTGCTGCACACACACACACACACACACACACACACACACACACACACACACACAGAGTACCCCCCAGTACCCCCCTACCCCACCCCTGCTCTATCATTTTCTCATTATACATTTCCGTATATAAATTTATGTACCACAGTAACTAAATATTTATGAAGTCAGCCAACAAAAACATGTTAATGCATGGTGATTACAAGTATATTGGAATTTGACGAGTAACACAGTTGCATGATGGGACTTGTTATTTTTTTTTTTTTTAATTTTTTTTCCAAAAAAAATTCAATTAAATCCAAGTCAAAATCCAGACCTCTAATTCTCCTCTGTTCCCCAGTACTCCATGGAACATATTTTGAAAATTTTGAGATAAAAGTCTTTGGAGATTAAATCTTCTAAAATATGTTCCATGGAGTACTATTTTATGACTTTGCTGAGTCTCATTCAGATTGCCCAATTTAAGAATGTTTCTGAAAATGAATAAAATTCCTTCATAGATTTTTGGATCTTTCCAGGTATAGCCAATGATTTTATCCCCCAGAATCCTTCACCTTTCAAGGAATTATTTTTCATAGTGAGCCCAGTGACTTGATGTTGCCCAAACCTTTTTATTTTCCAATATAAGCTCCAAGACACTAACTGATACTGTGAAATATATTTTTACTAGCCTTATCAAATAAATGAGCACAGTTTTTTGCTCACTCCATTAAACTGGGTAATAATTCTTTAGATGTGAATGTTAGGTAGGTTCTACTGTAATAACTAATTGCAAAAGTTGTAAATTTGTTTAATGGATGAAATGTGTACTTTTTGTATTCTGTACAGCTTGTCTTTTTTAAATATTAAGTACTTAAATGCACTTACTATGATAGGAAATATGTGTGCCTTCTAGGATTTATGAAGCTGTTTCATGAACTCTTAAGAAATTTGTAAGTTATAAAGTTTCCCTGTCTTAATAACAAAGGTTTACTCATAATACTGTAGAACTTTAGTTTGAGAAAATGGATTTGACTATGTACTGAATTTAGAAGTTGAAGATAATAGTATCTGTTTTGTTTTTGGGGCAAACTGATGTATTGTGCAATAAATAATCTTTAGCAATTAAATTTTAGGTAATTGAGATTTTTTATTATGTAGTTTCACGTTTTTATATACCAAGTGTTTATATTCCTTAGAGGACTGTTTTGTGTTGTGTTCTGGCGGATTGTGCTGTTTTTGTGCTATGTTTTAAAACACTTCAAATTAGACTCGATTTACTTATACCTAATATAGGTAATAAGGCTGCTTGAAAGTATCTTTTGGTTCAGTGATTTTTATCATTAAGAAGTTGGATTCATTAAAAGGCAATCCAAAGAATTTGTACTTTTAACTTTTTTTCTTAAGTCCAGCTTGCTTTCTTTATCTAGGAGTAAGAAAGCTACTTGGAGATTAGAGAAATCAGGTGACCACCCACATTTATAAAGGACATTTATAATGACAATATAACATAAACAGCAACAGCTGTTCATTTGTTTTCATGTCTTTCTATTACCCTACTGGATAGTAAAAATAATAAAATACTTCACCCTGTGGTGGTTTTGATATTTTACCTTGTAAGATCATTTCTAAGATAAAAGAGTGGAATTAGAGAAGCAGGCTAGAATCTTAGTGCTGAGAATGGGAAAACCATTTATAAGAAGGAGTAGCAGTTTATAATTAATGTGTATCATCATGGAGAAGTACACATTTTGGTGTCAAAGACATAAAAGCCCCCTCAGAGATTTATTTTTACAATCTTGCAGCTGTTTATAGTCTTAACTCTGGCATACTCTGTCTCCCTAATATATTTCTTTAGAGGTTGAAGGTATAAAAATTTTCAAGGAACTATGTCTGATAAGTGTTCCTTTTATTGCAGTTAGTTATACCTGTTTTTTATAATAGTCATAGTTTTTAGGTAGAGAATACCTAGGTTTATTACCAGTGTATCACCTTCAGTTGCGTCTGCGATCTCAGAAAATGATCAAAATATTATTTCACCATCACGGCATTCAGAAACAAGTAAAGAGAAAGCCATAGGGATGTGCTTTTAACTCTGCCTTATCCAAGGTAAGACAAAGTAAAGGTGCAGGACAGGCCTGGTAACCACCACCCCAGGAGCTGTGATTGGTTTTAATGAGGCACAGAACAACTGTGATTGGTTTTCATGAGGCACAGAACAATAACATTGATCATTTCAACAGTGCAGTTTCAAGTAACAGTGTGAACTTGAGCCCTTTCGAGTAAGCATGTCTCAAAAACCATTCTGCTAGAAACGTGGGCTAGTGTACAATTGTCTTTGATTCCAACTGTGATCACAAAAGAAAGAGATTCACCCTAAAAAGGCCAATGAGATTGATGATGTAATAAAAGTGCATTGTGCTATAGAAAAAGGTATCTGAAAAGCGTGCAGGTCAGGTAAAATCCAATAGGTGTTGACTGAACAGACTGGAGATATATCCAGGGAAAGGAAATGACCATGTGAGACTTTACTCATGAACTGTTACAGCAGAAGTTAGAAAAAAAGGGCAAAAGTTTCCCTCCGGGGTTTTGAAAGCTTCAGTTCAAATTTTTGAGTTTTCCTAGTGAATGTCATCCATATCTGAATCTTGATTCAGAATAGATAAATTAGTCATTATTATTGATAGCTTTTCATGATGCCTATATCTTTTCTTTAAAACTTAAAAGATTTGCCTAAAATAGTTTAAAACTGTTGAGCCACAGCCCTAACAGACTTTATTTAATAATTAAATGCTTGATACACACAAAATGACAATGAAGAACTGTAAAATACTTGTTATGTTCAGGCAAATGTATACAAATGGCTTTTTAAAAACGAGTGCCTAAAATAAATGCTCGGTTTTCATTCAGTTTCATGGTTAGCTATAAGGTAGCATATGTTTGCCTTGTAAAAAGACTGTATTTATTGTTCCGTATGCTAAGTTGACCAGTGGAGGGAATAATCGTTACAAAGTAACAGGACAAGACAACCTAAAGCCAGGTAAGCATCTTCACAGGCAAAAATAGTGTTCTTCTAACTCTGTGATGATTCACAAGGGCTTACTCTAGTCTATATTTGTCCATAGAGATAGACAAGAAGGTCCTTGAGCAGCCTCTTGAGTTCCAGGAGCATACAACCTTAAAATATTTCCAAAAGAGGAGATTCGTTCATTTTTATATAATATACATTTATTGAGCACCTACTATGTACCAGGCCCTAGTAACACAGATGAAGAGTACATTGGTAAAGCTTAAATTCAGACTGGTCTTTAAAAATGCTTTCTACCTGGCCCCTGGGACCAGGTACATACTGAAGAGGTCTGCATATTAGGTAAAGGAGAGATTTCACCGTGTGGTGGGGGGTGGGAAATGCACCAAGTTACAGTGATAAAAAAAAATTCTAAATGTGTCAGGCCTGAAGGAAGAGTGGGGAAAGGACTAGATTAGGATTAGGGAAACCTAGTTCTGATCCTATTACTTATTAGAGCTGTGTGACCTTAATCAAATTTCACTTCTGTGGCCCTAACTGTTCATAAGTAAAATGATAATTGGGCTACAGTCACAGAATATTAGAACCAAAAGGAACAGAGGTCATCTAGTCCTGTGCTTTTCAAAGTCCTTAGTTCAAATGTAAATACACAGAAGCCCCAGTATAAAACCGATAAAAGCTGAGTCACCTTGAAGTAAAAGCAGCACCTCAGAGCCTCAACCCCCTTCTCATTCCCTGCCCTGAAGTGGTCCAGGAACTGAGCTCACAGAACACCACGGAAAACCACTCATCTGAT EMBV3_30444 CAACACCCACCTGAAGCACCCTGCAATCAGGCAGTTGCAGTTCTGGAGCATGGAGTTTGA Variant GeneID:617640|PUSL1:XM_002694135:503_cdna 397^717 3 EMBV3_30431 GeneID:617640 16 GENE PUSL1 NULL pseudouridylate synthase-like 1 EMBV3_40491 GCCTGAAAGAAAAGGCAGAGAGGACAAATCCAGCAAAGATACTGACGTTACTGCCTGCCC Gene BVV0102_357956 + 0 NULL GK000021.2:70118401-70123916 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120269 TCONS_00120268 TCONS_00120270 1 XLOC_073119 Coding TCONS_00120268 XLOC_073119 Coding Coding TDRD9 21:70120329-70190592 j TSS89864 6197 1 TCONS_00120268_15 819 0.229304502178473 23 0.912128889015399 0.000141285184313785 0.000478639822097829 0.000470574276795957 0.000741533819473722 0.000644417016772956 1.17091947308613e-05 0.000419659411589679 0.000143169561966345 0.00046573056337781 4.75333448954834e-79 1.56527803043692e-91 3.94240842424874e-114 4.22732113522988e-06 3.43761688600967e-06 0.000119049249330662 3.57022662135028e-06 5.01599059731106e-05 1.03758914690966e-83 0.000510556444160647 0.00013700280401501 0.000335606220708274 1.60399817014323e-08 3.6789194965787e-171 7.24605605555241e-122 0.000383409889109181 0.00184381181707428 0.000416768925764204 2.8770014815078e-240 6.02790777896973e-87 1.56594537986969e-37 XM_002696785.3 TDRD9 PREDICTED: Bos taurus tudor domain containing 9 (TDRD9), mRNA. 0.0 4569 100.00 0.408584799096337 NM_153046.2 TDRD9 Homo sapiens tudor domain containing 9 (TDRD9), mRNA. 0.0 2338 84.48 0.34097143779248 TCONS_00120268_15 sp|Q14BI7|TDRD9_MOUSE TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9; 0.0 1345 82.78 0.984126984126984 0 coding 0 0 0 0 AGAATGGGCCATCCCAGAAGATTTATTCAAAGCACAAAGTGCTATATTTTGTGGCTGAGGAGGGTCAGTGAAGATAGGAAAGTCTTGGGCAAAGCTTCTCCTGCTCATGGCATCAACATCATTTGTAATCGTCTTCTGCTGTTTTCCCTTTGGGCCTGCAGCCCCACCAGCTCCGGGAATGCAAATATGGGAAACCTCCACCAAGGCCCACTCTGGGGCCTTCCCAGGTGCCCTGACCTAGGTGTCCACGTGCCTATGCAGAAATATCAAGCTGCCTCTTGTGAACTCTGGACTTTGGGCAGGAATGCTGGATGAGCTGGGCCAAGTGACTAAAGAGGCCAAGAACTACTAGTGAAAGTAAGGGGTCAAAGCAGGCCCTGGGGCAAGCCTGTGGCATCTCCAGACCTGTCATCACTTGTCTGTCATCCTCAAAGAAGGCTCACAACTGAAGCAGCAGATCCAATCCATCCAGCAGTCCATTGAAAGGCTCTTAGTCTAAACAGGTGACCTCGGCCACATGTCCTGCTGACTCCTCCCCCAGGGGTTATGTATCATATTGTCTGTTAGCATGCAGTATCTTCAGCTACCTTCTGTTGTTATAAAATACTGTAGTGCTTTAATCCCGTTTTTGGACTTCCGTGGTGTCTCAATGTTAAAGAACCTACCTGCCAATGCAGGAGACACAGTTTTGATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGAAATGGCAACATGCTCCAGTTTTCTTGCCTCAGAAATCCCAAGGACAGAGAAGCCTGGAGACTTCTGGTCTCCAGTAAACTCCTGGAGTTTACTCAAACTCATGTCCATTGAGTCAGTGATGCCATTCAACCATCTCATCTTCTATTGTCCCCTTCTCCTCTCGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTCAAATGCGTTAGTTCTTTGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAATGAACATTCAGGGCTGATTTCCTTGAGGATGGACTGGTTGGATCTCCTCGTACTGCTGCTGCTGCTAAATCACTTCAGTCACGTCTCACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCCCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGATTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCCTAGCAACCCCATGGACTGCAGCCTACCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTCTCCTTATACTAGTAATGTACTAATAATGTACTAGGGAACACAAATGGGATTTGCAGTTATTGAAGTGGACGACAGAAGATGATGTGGTTGGATGGCATCACCTACTCAATGGACAGGAGTTTGAGCAAACTTTCGGAGACCGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCCATGGGGTCACAAAGAGTTGCACATGACCGAGCAACTGAACAACAGCCTATCTTGCAAAATTAGAACATGTGTTAGCTTTCACCAAACTTGTAGTGTTTTTCAATCAATGCTGAATGACGTACAAAGAGTCTCAATGAGTTTATGATCACATTTTCTTGTCTTTCCCTTGCCCACAAATGTGTACATGTGAGGCGGTTCAGTATTTGGATCAGCCAAAACTCCAAGGCCCAGATCTCATATGTTGGTGGTGTGGCCAAGTTAGGACCTGGAACTGCTAGCTCAGTACCATGCTGGGTTCATTTTTTGTAAGAAACCAGTAGTTCAACCACGTCTAGTCTGACTTCTACCTGCACTGCTCTCAGGCTGACCTCTTAACTGCCACTCATTGCGTATTTCCCAGTCCTGAACTGATTGGCTCTCACACTGTTGATCAGTACATGTTCTTCATGCTGCTCAATTGGCTCTCACACTGTTGATCAGTACATGTTCTTCATGCTGCTCAGGCACTCTTTCACACTGCTCCTGGGAGCCCACATGGTGCCCGACACTGCACTGGGCGCTGATTATATTAAGGTGGGCAGGCAGTAACGTCAGTATCTTTGCTGGATTTGTCCTCTCTGCCTTTTCTTTCAGGCTGTTTCCTAGCTTCTGTCCATCTCCACTCACTCTGGCCTGGACCTTTTCAGCTGCTCTGAGGGTTTTAACCACCATCCATTTGTTGATAATCTCCAAAGGTGAACCTCTTACCACCTGTTTCTGTGCAGCTGTGGGGAGGACATTGCCTCCGAGAAATGGATTTAGGAAGGAAGACGAACTCAGTTCAGTTCAGTCGCTCAGTTGTGTCTGACTCTTTGCGACCCCATGAATCACAGCATGCCAGGCCTCCTTGTCCATCACCAACTCCCGGAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCATCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGACTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTTCTTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAGGAGTGTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTTGGCGCTCAGCCTTCTTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCACTCAAGGAAGACGCAACTCAAGTTGCGGCCAGTCAAGTTCTGGCCCCCTAAATTCCGTCCAGATGCTCTCAGCTCCCAGAGCCCCCTGCCTTCATCAGCGGATTACCTCCCCTCCAAGTCCTCCTTCACCCAGCTTGTTATCGGTTCTCCCGCAGGTGTCCACTTAGGTGTCATTTTCTCCAAGAAGCCTTCCCTAGCTTTCTTGCTCCTTTCCCCAAATTAGGTGCAAGGTGTCTGAGGTTAGCAGGGTCGGTTTGCCTTTCATCTTCCTCACCCTGAGGTCTATCACTGCGACCCTGCACTGGGCCAGGCGCACAGGAGGTCCGCAATAAACTTCTGTTCCTTCTCGGCCCAGATTGCCAGGCCTTAGACGGAGTAGCCCTGAGGGGGAGGCTGGAGAGACACTGGGGGCGCTGGTCTTGCACATCTACGGTCCCCTGATGCTGGGCCCACCTCCACAAGGCCGAGGGACCCTGAAGGCCTCATTTCCCCAATTTTGGTAATGGACGGCCAAACCCCGAGTCACGCAGCCTCTGTGTGGGCTGAAGAGCAGTGCTCCCAACAGGCCTAGCGCAGTGCGTCGGCGCCATGGGGTCCTTCGGCGCCACAAGCTCCCAGCAGCCCCGGTGCGTGGAGGGCTCTGATTGGAGGGCTTGTGGTGGGGCGGGGCCAGCGGCCTGAGGTTGAGCAGTGTGCCTTGTGGAGGGCTCTGATTGGAGGGCTTGCAGTGGGGCGGGGCCGCGGGCTCGCCATCTCTTGATCCTGCAGCCAGGTTTCCGCCTCGCCTGTTCACGCTTCTCTGACTGGCGGTTGAGCGGCGCTCAGGCCCGGCTGCGAACATGCTGCGCAAGCTCACCCTCGACCAAATCAATGATTGGTTTACCATAGGCAAGATGGTGACCAATGTGGAACTCCTCGGCTCGCCACCTGCCTTCCCAGCCGAGGCTGCTCGGGACGAGGCACAGCGCAGGGATGCGGCCCCCAGCTCTGACCCTGAGGCTGAGGGCCAGGCTGAGTCTCCAGCTGAGGCTCCAGCTGAGGCTCCGGTCCTGGCCGAGGCCCAGGCCGAGGCCCAGCACCAAGACCAGGAGCAGGCTCCAGCCCAGGCCCAGGCCACGCTGGCACTACCATGGAGGCTCCTGGGTGAAAAGAGCGCAGATACGGAGTATATTGACAAATACAGACAACTTGAAGCACAAGAATTTTATCTGTATTTCCTTGATCACTTAATCAGCGGGTCAGATAAAACAGGTCCAAGGCCACCTTTAGCTAAATCCAGCCATGTGATGCGCATCCCAGAGACAGCCTATAAATATCCTGAGTTGCCTATAAGCCGGTGTAAGGAAGAGGTCATCTCTTTGATCGAAAGCAATTCCGTGGTGATCATACACGGCGCCACGGGCAGTGGCAAGAGCACCCAGCTCCCACAGTACGTCCTCGACCATTACCTGCAGCGCTCCGCCTACTGCAACATCGTGGTCACCCAGCCGCGCAAGATCGGGGCCAGCAGCATCGCCCGCTGGATCAGCAGAGAGCGCGGCTGGGTTTTGGGTGGATTGGTGGGCTACCAGGTAGGGTTGGAAAAAATAGCGACAGAAGACACCAAGTTAATTTATATGACAACGGGAGTCCTGCTCCAGAAGATAGTGAGTGCCAAGAGCTTGGTGGAGTTCACACACGTCTTCATTGATGAAGTACACGAGCGAACTGAAGAAATGGATTTCCTGTTGCTAGTTGTCCGCAAACTTTTAAGAACAAATTCACGTTTTGTGAAGGTTGTCCTCATGTCAGCCACCATCAACTGCAGAGAGTTTGCAGATTACTTTGCTGTTCCCGTTCAGAACAAGATGAGCCCAGCTTACATTTTTGAAGTGGAAGGAAAGCCCTTCTCAATTGAGGAGTATTATCTTAACGATTTGGAGCACGTTCATCACAGCAGGCTTTCTCCCCACCTCCTGGAGGAGCCAGTGATAACCAGGGCTGTCTATGAGGTTGCCATCTCCCTGATTCAGATGTTTGATGACTTGGACATGAAAGAGAGTGGGGCCAAGACCCCGTCAGGCAGCCCGTTTCTGTCAGAGCGGAGCAGCGTGCTGGTATTTCTGCCAGGTCTGGGTGAAATAAACTATATGCACGAACTTCTCACAAACATGGTTCATAAAAGGTTGCAGGTCTATCCACTCCATTCAAGTGTGACTTTGGAGGAACAGAACAACGTGTTTTTAAGTCCAGTGCCCGGGTACAGAAAGATCATTCTGTCCACCAATATCGCAGAGAGTTCTGTCACGGTTCCAGACGTCAAGTACGTTATAGATTTTTGTTTGACCAGAACTCTGGTTTGTGATGAAGACACGAATTACCAGAGTCTGCGGCTGAGCTGGGCCTCTAAGACCAGCTGTGAGCAGAGGAAAGGCCGCGCTGGACGGGTGTCTAAAGGATACTGTTACAGACTCGTGCACAAGGATTTCTGGGACAACTCCATCCCCAACCACGTCATCCCTGAGATGTTGCGTTGTCCGTTAGGAAGCACGATATTGAAGGTGAAGTTACTTGACATGGGTGAGCCCAGGGCTCTGCTGGCCACGGCCCTTTCTCCACCTAGTCTGAGCGACATTGAACGCACCATCCTTCTGCTCAAGGAGGTGGGAGCGCTTGCGGTGAGCGGGCGGAGAGAAGACGACAACCCCCACGATGGTGAGCTGACCTTCCTAGGAAGGGTTCTAGCCCAGCTTCCTGTCAGTCAGCAGCTCGGCAAACTCATAGTCCTCGGACACGTGTTCGGGTGTCTGGACGAGTGTCTCATCATCGCGGCATCTCTTTCCTTGAAGAATTTTTTTGCGATGCCTTTCAGGCAGCATCTTGATGGATACAGGAACAAGGTGAATTTCGCTGGCAGCAGCAGGAGTGACTGCATCGCACTTGTTGAAGCCTTTAGAGCGTGGCAGACCTGCAGACAGAGAGGGGAGCTGCGGCACCCGAAGGATGAACTTGACTGGGGGCGGTTAAATTACATTCAGATCAAGAGAATTAGAGAGGTGGCCGAGTTATATGAAGAACTGAAGACTAGGGTCTCACAGTTCAACATGTATGTTGATTCCCGGCGGCCTGTCCTAGACCAGGAGTACAAGTACAAGCAGAGATTCATCCTGCAGGTTGTGTTGGCAGGTGCTTTTTATCCAAATTACTTTACTTTCGGGCAGCCTGATGAAGAGATAGCCACGAGGGAGCTGGCAGGCAAAGACCCAAAGACGACCATCGTGACCTGGCCTGAAGAAAGAAGGCCTTGTGGAGTGAAGTAGTCAAGGCTAACCTTGCCTGCCCCATCTCGTTCTGAAGGATTTAACATACTTCTCCATAAATTTAAGAGCAGGTGGTTAATAACTTCATTTTACGCAAAGTGTAAAGGGTTATTTGGTTGGCAACTTTGTACTGTGATTTAAACTCTGATC EMBV3_38214 TTAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGTAGACTGCTCAGTTCCACTAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41077 CCATCGCTATCATGCTGCATGAGCTCATCAAGCAGATTGTCCTTGGGAAGCGAGAGGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06335 GCAACAGATTGTGATGGGAAAATCTGTTTTCTGTAGGTTTTATTTGTTGCATACTTTGAC Gene GeneID:539850|HNRNPH3:XM_002698859:440_cdna Constitutive 3 NULL GeneID:539850 28 GENE HNRNPH3 HNRPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) EMBV3_13032 CTCTGTGGTTCGTCGGAGCCACTATGAGGAGGGTCCAGGGAAGAATATACCATTTTCAGT Gene GeneID:100295873|LOC100295873:XM_002697750:262_cdna Constitutive 0 NULL GeneID:100295873 24 GENE LOC100295873 NULL similar to cytochrome c oxidase, subunit VIIc EMBV3_08451 TACGAATTGACACGGGAACCAACTGAATAGCGTAGATATAGGAAAGCAGGATGGTTATGG Gene GeneID:532870|LMO3:NM_001046337:38_cdna Constitutive 0 NULL GeneID:532870 5 GENE LMO3 MGC137301 LIM domain only 3 (rhombotin-like 2) EMBV3_41341 CCACTGCGTGGGGCAGCTTTGTTTCCACTCTGATGCTCTGTCCTTGGTTTTTCCATCTTC Gene GeneID:506713|CD82:NM_001097990:42_cdna Constitutive 0 NULL GeneID:506713 15 GENE CD82 MGC139594 CD82 molecule EMBV3_16008 CAACTCCATGAGGGTAGCAGCCCTGGTCTCTAAAATGAACACTCAGTTGTGACACTGGAG Gene BVT0102_405811 - 1 EMBV3_03158 GK000025.2:1744985-1746175 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145906 1 XLOC_088969 Coding TCONS_00145906 XLOC_088969 Coding Coding PGP 25:1744510-1747366 = TSS109225 2757 1 TCONS_00145906_1 321 2 0.0350262697022767 0.000463885398704046 0.000182235031020105 0.000229924115364932 0.000144576749983876 0.000224444228899448 5.57901108768337e-05 0.000467599092131523 0.000141592131413227 0.000206769775523859 0.000867326689490747 0.000273174542224001 4.79871472706783e-05 1.38763583640997e-05 0.000288348295394707 7.77510565944455e-05 0.0139146763059042 0.00445015511640334 0.00800871769348598 0.000764691829587451 0.000284319357311657 0.000491089422340252 0.0048932729053113 0.0054671518068807 0.00530241685100528 0.000266383678344288 0.000183332355600712 0.000270205930995108 0.00133086316317807 0.00105121409938579 0.00142182874675596 NM_001038172.2 PGP Bos taurus phosphoglycolate phosphatase (PGP), mRNA. 0.0 4964 99.93 0.999637286906057 NM_001042371.2 PGP Homo sapiens phosphoglycolate phosphatase (PGP), mRNA. 0.0 1876 80.96 0.716721073630758 TCONS_00145906_1 sp|Q2T9S4|PGP_BOVIN PGP_BOVIN Phosphoglycolate phosphatase; 0.0 650 100.00 0.996884735202492 4 coding 0 0 0 0 -0.14062639828546 0.738560087316078 0.00778191944098215 0.886835249980023 CGGCAGCAGGCGGCTGCGAGGAAGAGCGGCCGGCCGGTGGCGGCGGCGGCGGCCGGTGGCGGCGGCGTCGGCGGGCGGCCATGGCGGAGGCGGAGGCTGGCGGCGACGACGGCCGCTGCGTGCGGCTGAACGCCGAGCGGGCCCAGGCGCTGCTGGCCGACGTGGACACGCTGCTGTTCGACTGCGACGGCGTGCTGTGGCGCGGCGAGACGGCGGTGCCCGGCGCGCCCGAGACCCTGACGGCGCTGAGGGCCCGCGGCAAGCGCCTCGCCTTCATCACCAACAACAGCAGCAAGACCCGCGAGGCTTACGCCGAAAAGCTGAGGTGCCTGGGCTTCGGCGCCCCGGCGGGGCCCGACGCCGGTCGCGAGGTCTTCGGCACGGCCTACTGCACCGCGCTCTACCTGCGCCAGCGCCTGACTGGCCCGCCGGCCCCCAAGGCCTACGTGCTGGGCAGCGTGGCCCTGGCCGCCGAGCTGGAGGCCGTGGGCGTCTCCTGCGTGGGCGTGGGGCCCGAGCCGCTGCTGGGCGATGGCCCCGGCGCCTGGCTGGACGCGCCCCTGGAGCCCGATGTGCGCGCCGTCGTGGTGGGCTTCGATCCGCACTTCAGCTACATGAAGCTCACCAAGGCCGTGCGCTACCTGCAACAGCCCGACTGCCTGCTTGTGGGCACCAACATGGACAACCGACTCCCCCTGGAGAACGGCCGCTTCATCGCGGGTACCGGCTGTCTGGTCCGAGCCGTGGAGATGGCCGCCCAGCGCCAAGCCGACATCATAGGGAAGCCCAGCCGCTTCATCTTCGATTGCGTGTCCCAGGAGTACGGCATCCACCCAGAGCGTACCGTCATGGTGGGCGACCGCCTGGACACAGACATCCTCCTGGGCGTGACCTGTGGTCTGAAGACCATCCTGACCCTCACGGGTGTCTCCAGTCTGCGAGACGTGAAAAGTAATCAGGAAAGTGACTGCATGGCTAAGAAGAAAATGGTCCCTGACTTCTATGTTGACAGCATAGCCGACCTTTTGCCTGCCCTTCAAGGTTAAAGATTTAGTGTCTTTAATCTCCAGAATAAAAAAAAAATTGAAACCACTCACCCAAATTAATAGGTGGGGCTTCAGCATCGCTCAGCTAGGTGGCTTCAAGTTTGCTTACTTGGAGTTAAGCAGAGGCGCTAGTTGTTAACCTTGTAAGTAAACGTTTGGGGGGCGACTTTGTTTACAGATACTTATATTTTAAGATGCACTTTTAAGCTTGGAGGGCATTGTGGGGATCCTGGGCCTTAGGTGCCAGTGGGCCTTGCTGTTGGGTTCAGTGTATGTCCAGGATTCAGGTAACCTCAGGGCCTACTGGTGGGACTGAGGTGGGTCTAGGGGTGTCATGTATTTATTGAAAGTTTCAGGAATCAGTGGGGAGGAGGCGCTACTCAATTCCACTGTTGTGAGCAACTTGTGCAAACCAAGCCAGGGCCCCATCAGTGTGGTCCTCAGAGGAACCTGCTGCCGCCTCATGTCCTCACCTGCAGGGTGGGAGCGAAGGAAGGGGCTGCTCTCAGGCGGAGCCTCCCTGTCCATAGGGTCTGGGGTGCTGCCCTCACCACCCCACACTTCCTTCAAAACCACTCCAGTGTCACAACTGAGTGTTCATTTTAGAGACCAGGGCTGCTACCCTCATGGAGTTGTGCATTTCTGTAAACTCAGCCCGGCTGAGCCTCGTCCTTTCCAAACGTGCATGTAAACCCAGGTGGTCTGGACTGAGCCTGTTGCTTGGCGAGCAGCCAGGAGGGCATGAATGCCATCGTTGAACTCAGGGCTGCCGTTTAGGGAGCTCAGAGCAGCATTGATACCAAAAGTTTTTGTTTTTTCGCTTTCTAACAATTTTGTCAGGTGGTGGATTTGAAGCGTAAGCGTATGATTAATAGCTGTGCTCTGTCTTATAGGGGAAATCCCACTGAAGAAGTCTGCGTGCCCCACAGCCAGCAGTTGGGCCAAAGGCACGTGCTGGCCAAAGAATGCTTGTCACCCAAGGCTCCCTCTGGGTAGGGGAGGAAAGAGGTGTCCCCAAAACAGGAATTGAGTCTTTTCCTGTCTTCCCAGACACTTGGTTGGGATAGATGTCATATCCCAGTGGTCCATGAGGCCATCGGTTTTGACCCTGAGGTCCCTTGTCACTTGCCAGCTGGAGGACTGGCTGGGTCCACTGGCCAGCCAAGGGTTCTTGGCAGGGGGCCGTGGCCTTTTCTGCCTGCGCCCTGAGTTGCTGACCTTTGAGGATGGGCCACTGGCTGCACTTGTAGGGGAGTGCCTGGGAAGCTGTTCCTTTTGGCCGACTACTTCCTGGTGCCTCGCCCCACACCCAGCAGCTTCTGCTCAGAGCCCACAGTTCTCTCCTAGCCTCAAGATCACCTTCACCCACCCTCTAAGAGTTCTCAGAGCAATAAAGCATGTCCTGAGCCTTGGCTCCTTCCAGGGCTGAGCGTCTGGGGTTCAGACTCTGCCGGGGGCAACACGAGGGCAGCAGCGCCTGTGAGGTTGGTGGTGCTGACGTTGGCTCTGTGAGGTCGGCTCAAGGTGGGTCTGGATGTTGAGCAGGCCTGTCAGGGCGTTGTCACCCACACCAGGAGCACGCAGCAGGGGCGGTAGCCGGCGACACTTCCCTCTTTGCCTGGGCAGCAGCCCAGGAGCCTGTGCATCCTGTCCCTCACCCCTGTTGCACTGTGTGAACCCAAAGGTGTATTAAACTCTCGACCACAGCTGA EMBV3_13322 TTCACATCTAAGAAGAATTGGAAGGTTCAGGTCACAGACTTTGGGTTTGCCAAAAGAGTT Variant GeneID:282323|PRKACB:NM_174585:14_cdna 468^594 1 EMBV3_06957 GeneID:282323 3 GENE PRKACB NULL protein kinase, cAMP-dependent, catalytic, beta EMBV3_06824 AAACCCATGCCCCCTTCATTGGAAGCACAGAATCTTAACCTCTGCTCCACCAGGGAACTA Gene BVT0102_440211 + 0 NULL GK000001.2:140046220-140061175 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011429 1 XLOC_006980 NonCoding TCONS_00011429 XLOC_006980 NonCoding NonCoding - 1:140053717-140054235 - TSS8506 518 2 TCONS_00011429_2 48 0.438223938223938 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000541440518422085 0.000111349527595101 0 0 0 1.2159483246777e-06 0 0 0 0 0 XM_005203874.1 TARS2 PREDICTED: Bos taurus threonyl-tRNA synthetase 2, mitochondrial (putative) (TARS2), transcript variant X2, mRNA. 2e-24 116 80.58 0.256756756756757 0 noncoding 0 0 0 0 -0.0900022041089711 0.598077358507865 -0.0847381652042309 0.28491070848404 CAGACGTTTTCAAACCTGCCCTCCACACAGTCTCAAGTTACAGCTCAAAGCCATGTCTTCCTCAGGGGCTGTGCACTTCTAGGGATTCAGCTAAGTAAACTCAACAGCTCATGTGTGGAGTTCTGTGGTGCCTAGTGGTTAGGGTTCTGGCCATTCACTGCCGTGGCCAGGGTTCAGTCCCTGCTTGGAGAGCTGAGATCCTGCAAGCTGTGTGACATGGCCAAAAATAGAGTAGTGTTTAGGAACCTAGTTCCCTGGTGGAGCAGAGGTTAAGATTCTGTGCTTCCAATGAAGGGGGCATGGGTTTGATCAGGTCAGGGAACTAAGATCCCACATGCCATGCTGTATGGTCAAAAAAAAAAAAAAAACTAAAAAAAAAAACAGCTCACATGTGAACTTTGCCTTCTGTATTAGTGATCTGTTGCTGAAATGTACTGTAAAAGGTAGTGACTTAACAATAAACACATCTCATGGTGGCTGATGATCAGGAATTACAGAATGGCTCGCTAGATGGTTCT TCONS_00005443 TCONS_00005444 TCONS_00005445 TCONS_00005446 TCONS_00005447 . 3' 7054 TCONS_00005443 TCONS_00005444 TCONS_00005445 TCONS_00005446 TCONS_00005447 . 3' 7571 EMBV3_10182 CTCCTGCGTGCCCTACGACCCCTTCGGTACACTTAGAAGTTGATTTTCCTGTTTTCATCG Gene GeneID:100101492|STK24:NM_001099950:35_cdna Constitutive 0 NULL GeneID:100101492 12 GENE STK24 MST3B serine/threonine kinase 24 (STE20 homolog, yeast) EMBV3_02921 TGATAACTCTCCAGAAGCACTTGTGTGCAAGCAAAATCTAAGAACTGAAGAGCTGATGCC Gene GeneID:514509|AGMAT:XM_002694143:526_cdna Constitutive 2 NULL GeneID:514509 16 GENE AGMAT NULL agmatine ureohydrolase (agmatinase) EMBV3_35162 ATCCAAAAATATATTTTTTAATTTCTGAAGAAGGTAATTCTTAAAAATACATTATATAAC Gene GeneID:539815|B3GALT2:NM_001076188:17_cdna Constitutive 2 NULL GeneID:539815 16 GENE B3GALT2 NULL UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 EMBV3_29683 ATTTGTGCAAGTGTACTGAGTCTCAGTGTTCTCTCTGTAGTTTGCAGAGTAGTGGAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14158 GAGGCAGGCACGCCCCAGGGAGAAGCACAGGGAGAAAGGCGTACACTGTACCAGGCCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13003 TCGAGTCCTTAAACGTCTCCGTGGCCGCAGGAATCCTTCTTCACTCCATTTGCAGCCAGA Gene GeneID:526282|MRM1:NM_001101126:259_cdna Constitutive 2 NULL GeneID:526282 19 GENE MRM1 NULL mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) EMBV3_02859 GCTGAACTGGTTTTCTCCAGTACAAGCATCACAAAAAGGAAGGACGTTCAACCTGACGGC Gene GeneID:505868|PDXDC1:NM_001101859:326_cdna UTR3_Alt 2 NULL GeneID:505868 25 GENE PDXDC1 MGC179380 pyridoxal-dependent decarboxylase domain containing 1 EMBV3_37405 GAAGTTTCCACCAGCGAGAACTACGAAGATGTGTGTGATGCGTTCCGGCATCTGTGCAGA Gene GeneID:505695|RASL11A:XM_002691858:155_cdna Constitutive 0 NULL GeneID:505695 12 GENE RASL11A NULL RAS-like, family 11, member A EMBV3_33140 GATGGGGCTTTGCAGTTTGCTAAAGGAGTGAAGAACATTCATTCTTGGATTCTAAGTCCA Gene GeneID:100140337|LOC100140337:NM_001135578:176_cdna Constitutive 1 NULL GeneID:100140337 23 GENE LOC100140337 NULL hypothetical protein LOC100140337 EMBV3_38747 TCCAGCCTCTCATCATACACCATGCACAGATGGTACAGCTGGGGGTCAACAACCACATGT Gene GeneID:510427|TICAM1:NM_001030301:3_cdna Constitutive 0 NULL GeneID:510427 7 GENE TICAM1 TRIF toll-like receptor adaptor molecule 1 EMBV3_03943 GAGGGTGACAGACTTACACTCGTGTGCTTTGAATTGGGAGAAAGTGGGCCTAAGAGGCAG Gene GeneID:506759|IFI16:XM_002685877:36_cdna Constitutive 0 NULL GeneID:506759 3 GENE IFI16 NULL interferon, gamma-inducible protein 16 EMBV3_42823 CAGCTCAGACTCCTACGCCGTGATCGACCTCAAAAAGACCGTGGCCATGTCCAACCTGCA Gene GeneID:509838|FRS3:NM_001098918:249_cdna Constitutive 0 NULL GeneID:509838 23 GENE FRS3 MGC165816 fibroblast growth factor receptor substrate 3 EMBV3_27338 AACATTTGTAATAATGAAGGTCTTACTGCAACAGTGCAATGCTTGCTGGACAGTGGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43179 GGGACTGATATTAAAGAGAGGTACTCGTGGCCTGCAAACACGATCTTCAGCATTGGGATT Gene BVT0101_053807 + 1 EMBV3_28922 GK000017.2:12064084-12276998 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074855 TCONS_00074856 TCONS_00074842 TCONS_00074852 TCONS_00074857 TCONS_00074854 TCONS_00074847 TCONS_00074853 TCONS_00074843 TCONS_00074840 1 XLOC_046443 Coding TCONS_00074847 XLOC_046443 Coding Coding SLC10A7 17:11923386-12252671 j TSS56602 3517 1 TCONS_00074847_5 257 10 0.989349619173722 0.00039190174957823 0.000574665540683552 0.000545978540611445 0.000285106056367513 0.000173766031713651 0.000144492171474967 0.000239588514271656 0.000360875446686099 0.000808145640086535 6.79789479074257e-06 5.6024117221917e-05 1.82023144329539e-05 7.25603927139165e-05 0.00051379429109729 0.000517432880634791 0.000529431307163692 0 0.00102090600800458 4.90428525140495e-05 0.000374345431478957 2.8791929757575e-16 0.000373715839757274 0.00012579025357949 0.00012036028320018 0.000877061065683714 0.000645188942751549 0.0003923076117834 7.96281711438886e-05 3.24850024744021e-05 4.89203336139967e-05 XR_228259.1 LOC614109 PREDICTED: Bos taurus sodium/bile acid cotransporter 7-like (LOC614109), misc_RNA. 0.0 4798 99.96 0.756895081034973 NM_001029998.3 SLC10A7 Homo sapiens solute carrier family 10, member 7 (SLC10A7), 0.0 2951 80.65 0.901336366221211 TCONS_00074847_5 sp|Q5PT53|NTCP7_MOUSE NTCP7_MOUSE Sodium/bile acid cotransporter 7; 4e-148 422 92.50 0.918287937743191 2 coding 0 0 0 0 -0.105115519242439 0.41159510316352 -0.0238165478676118 0.737477403492916 GGGGCCGTACGGTAGAGATGGCGGCGCTCAGTGAGACTTTCCTGTCACTGGATACTACTACTCCCAGCCCTCCTCCAAGCCGCCGGAGCAACCCCCTGGTCTTTAATTTACAAGTAGCAATTTGACTTGCTCTGCTGCATGTCAGGTGGGAGCTTGGAAAGTGTGGAGAAGCCCCGGGGATTAAGCGACCGTAGCTTAAAAAGAAAAAAAGCCAAGCAAATAAACAAAACCCACCCACCCTAACAAACATGAGGCTGCTGGAGAGAATGAGGAAAGAATGGTTCATGATTGGAATAGTACTGGCGATCGCGGGAGCAAAGCTGGAGCCGTCCATAGGGATGAATGGGGGTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCGGTGATATTAACCAAAGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCATCGTGGTCACACCCCTGCTACTGCTGCTTTTTCTTGGCTCATCGTCTTCTGTGCCTTTTACGTCTATTTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCCCTCGTTATTGGACAGATTGTCCGAAGATACATCAAGGACTGGCTGGAGAGAAAGCAGCCTCCTTTTGGTGCTGTCAGCAGCAGCGTGCTCCTCATGATCATCTACACAACCTTCTGCGACACGTTCTCGAACCCAAGTATCGACCTGGATAAATTCAGTCTCCTCCTCGTACTGTTCATAATATGTTCTATTCAACTGAGCTTTATGCTTTTAACCTTCATCTATTCCACAAGGAATAATTCGGGTTTCACACCAGCAGACACTGTAGCTGTCATGTTCTGTTCTACACACAAATCCCTCACGTTGGGAATCCCAATGCTGAAGATCGTGTTTGCAGGCCACGAGTACCTCTCTTTAATATCCGTCCCCTTGCTCATCTACCACCCGGTGCAAATCCTCCTGGGAAGCGTGCTCGTGCCGACGATAAAGTCCTGGATGGTGTCAAGGCAGAAGGGAGTGAAATTGATGAGGCCAACAGTATAACAGAGGAGGCGGTCGTTCCGCAGCCATGTATATATGTACAGGATTGTACTTAACAGTTCTGAAGACTTGTATTTGTGAACGTTGCTGCGATGCATATTTTATTTTTTTACACACAAAAAATATGATATAACTGTTTAAAGTGCCTTAAAATGTATTTGACGAGAGCATTATTTCCAAAACCTACTTAGTTGGTTACTGCCAGGGGTGGTACAGTATTTTGGAGTTGTTTAATTTCCTTTTTTCCTAACGCAGAAAACGGCCGTTGAAAGGGACAAAAAAACAAACACGTTTTCCTCGTACCATCTTCGTGCACTACAGCTCTCTCCTAGTTACTGTACTGTTTGAAATGAGGTCACATCATCAGGAAAATGCCCTTCCCGTGACAGTGAATATTTCCAAAATCTTATTTGATTTACCACATGATTCTTTCTTTTTCTGCAACTGTGACATGCCTCTTCCTTATCAACTCAGCAGGGGTCATAGATTGAATAGCTGCTGAAAAGCATATAAGTCATCTGCATTTCTTGATATCATTTTTTAAGACATTCCTTCAAATAGTTTCCACACAGAAATTCCTCAGTTCCATTATAAGAGACTGTGGTGTTCTGTGTCTTAAATTTATTATAAGCTGCTTCAAAGAAAGGGCCTGATGTTTGAGTTATGAGTCAAAGTACATGAGGTTTTGAGATTAAACTACAGGATTTGGGTTTCAGGATTTTTTCAAATTATATTTCAAATGTTTTCCCTTTTTCTTCCATCATTTCTTTCTTACCTGTTTTCCAGCACACTTGGCAACTCCCAAAAGCCAAATGTGAGACACCGAAATGTTACAATTAGCTTGACTGGCAAAATTAATGATGGATGATTCCACATTCCATAACTGAGACCAAAATTGTCTTCCTGTTACACTGATGTGCTGAGCACAAATTTCCCCTTTTAGCCAGAAGCAGCCTGTTACATCTTTGAATCAAGTACACTTAAGGCATTTGAAACGTTATTAATGAGAATTTTCCTTGGCAGATTTGACAAATGTTTGCAACATTTTTTAAAAAAATTAAATCACATTGCTGTTATGAATAAATGAAAATATAAAGGTCACAGAGGCAAACAAATGTTACATATACACGTTGTGTCTAGCTATGTGGAAAGAAAAACAGACACAGAAGATGCAAAACCATTCATTAAGCAAAACAGCAAGTACAATTAGTTCCCAAATTGGCATCAGCTTGCCATGGACTAGCCAGTAGTTGCTTCTGCTGTGGCTGGAAGAGCTTTCACGACCCAGTTAGAGAATAAAGTCATTGCTTTGTAGAAATGAGGGAACACTTTTTCTCTGCTTCCTGCACACCATTCTGTCACACCTCTCTACTTTTCATGATTTAACAGATGACACTGGCATCCTGAGTTGCACTGAGGCCACATCATATCTTTAGCAGCTGTTTTGTTGTTATTTTATCAATAACAGAGAGTCATTCCTTAGAAGCTCACCGTGTTTACCAATATCATAAATTTACATTACTGTTACTGCCAGCTCTTATCTTGTGTTACTTCTGAGTCATTTCAATGTCATTGAAACTCATAAATTTCACAAGAGTTAGCCTCAGTGTAAGTTTTAAGGCTAGTGCCAGACCCTGCAAAAATCTATGCTAAACAGGCTATTTGTCAAGAATTCCTATTGTCAAGAAATTCACTTGTGTCTAAAACTACAGCAATTTTGCTTGGTATTTTTGATGCTTACATATGCAGCACAGAAAGGTTTTTATGTTTTTTTCCTACAAACTTCTTTGAATTTCAGAGTAAATGGAATTGTCTGTCTGAGCTATCATAAAAGTCTTCAGCCTAGTATTAGAATTCTGATTTTTTTCCCCTCAACTGATCTACCTCTGTTGTCTTTCACCTATAGTAGGTGTGACTATGGGATAAAATTCGACTAAAAATGCTATAACATTTTATCTTTTGCTTTAAAAAAGTGTCTTCTGTTTTCAAATAATCTTTACATAGTGAGTTTTGGTGGCTTTATTGATATGTTTATGCCTATTTCTTTTTTTACACAAATGCTGTGCATATTTTTCCATAAAGGACAAAAAAATAAAATCAGATTTTATTTTTAATTCCTGCTTACTGGGATTTAATTATTCATATCTTGAAATATGTCCACGCACTGGTTTACACATTTGTTTTGTCTAAGTGTATTTATGAAAGAACTACATTATATTTATGTTTGCTCATTTTTCCACCTGGATTTTTTTAATGGCTCTTATGAAATTCTATTTTTTAAATGGGTGAGAATATTCATCTTTTCCTGTGCTCTTTTCTAAGTTTTCAAATTTTGTGGGTTCTTTTTATTCTTCCCTCTTCTGGTTAAAACTAACACACCTCTGGCTAATGTTCAGTGTTTATGCTAAATACCAAATTTTTTTAAAAGGATTGGTGAAGTAATGAAGTGGATTATTTATGATGAATGGA EMBV3_40692 CTCAATCTACCTTGTGCTACATTATCCTGCTGCTTTGTAATAATGTGCAGTCTGTATGCC Gene GeneID:282011|PSIP1:XM_002689576:12_cdna Constitutive 0 NULL GeneID:282011 8 GENE PSIP1 NULL PC4 and SFRS1 interacting protein 1 EMBV3_06298 CACTAACCCCCAGAACCCGTGAGTGGGAGCTTGTGTGGAAAAAAGGATCTTTGCAGATGT Gene BVT0101_043257 - 0 NULL GK000025.2:28294984-28339034 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42817 CCTTCAACCCCAAGCCATGTCTGGATCCCCATTGTCTCTAGTATCTGCAGGGTTTTTTGC Gene GeneID:509896|ABHD4:NM_001034368:116_cdna Constitutive 0 NULL GeneID:509896 10 GENE ABHD4 MGC137222 abhydrolase domain containing 4 EMBV3_30776 TGCAAGATGTAGATCCTCAGACATTTGATCCCCTGGTTGACCTCTTCAGGGACCATGGCA Gene GeneID:786670|SCML1:XM_002700383:48_cdna Constitutive 0 NULL GeneID:786670 X GENE SCML1 NULL sex comb on midleg-like 1 (Drosophila) EMBV3_23362 CAAGGTCCCTGCAGACTTGGGACAGGAGAGTCAGGCCTCGTCTTGGGTTGAGGCATGGAA Gene BVT0102_040534 + 0 NULL GK000017.2:72841044-72846719 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063808 TCONS_00201120 TCONS_00149038 TCONS_00063810 TCONS_00162571 TCONS_00200854 TCONS_00186491 TCONS_00142473 TCONS_00162568 TCONS_00162302 TCONS_00231771 TCONS_00218950 TCONS_00217533 TCONS_00168478 TCONS_00189709 TCONS_00156651 TCONS_00186556 TCONS_00240372 TCONS_00021875 TCONS_00168479 TCONS_00255144 TCONS_00178728 TCONS_00063807 TCONS_00131539 TCONS_00158397 TCONS_00066108 TCONS_00098199 TCONS_00238289 TCONS_00186558 TCONS_00131532 TCONS_00054137 TCONS_00147823 TCONS_00107104 TCONS_00032734 TCONS_00131535 TCONS_00149042 TCONS_00111145 TCONS_00054140 TCONS_00131533 TCONS_00168480 TCONS_00222182 TCONS_00231768 TCONS_00186557 TCONS_00233458 TCONS_00217532 TCONS_00129560 TCONS_00054136 TCONS_00207145 TCONS_00218944 TCONS_00186834 TCONS_00098203 TCONS_00011614 TCONS_00131531 TCONS_00238281 TCONS_00230828 52 XLOC_038534 XLOC_122768 XLOC_090915 XLOC_038536 XLOC_099452 XLOC_122505 XLOC_112543 XLOC_086898 XLOC_099449 XLOC_099184 XLOC_141259 XLOC_132269 XLOC_131531 XLOC_103118 XLOC_115747 XLOC_095111 XLOC_112608 XLOC_147036 XLOC_012548 XLOC_158076 XLOC_108501 XLOC_038533 XLOC_080244 XLOC_096851 XLOC_040826 XLOC_058445 XLOC_144956 XLOC_112610 XLOC_080237 XLOC_031946 XLOC_089710 XLOC_063015 XLOC_018972 XLOC_080240 XLOC_090919 XLOC_067045 XLOC_031949 XLOC_080238 XLOC_135491 XLOC_141256 XLOC_112609 XLOC_142940 XLOC_078273 XLOC_031945 XLOC_125663 XLOC_132263 XLOC_112885 XLOC_058449 XLOC_007165 XLOC_080236 XLOC_144948 XLOC_140318 Coding TCONS_00238281 XLOC_144948 NonCoding NonCoding - 9:2638-2927 - TSS177959 289 1 TCONS_00238281_1 49 1 0 2.35392749628492e-05 0.00564427719591084 3.55785187604303e-06 0.000148459313664162 0 0 0 0 0 3.25078518011764e-05 0 0 0 7.33102054731705e-06 6.28757612155257e-07 0 0 0 0 0 0 0 0 0 0 0 0 0 3.35959149657186e-06 1.60027897932342e-06 0 noncoding CTGTGAATGAAGTCAACACGAAGGGGCAGTGACTCACCCGAGCATCTTCCGGAAAAACTCCCAGGTTCCATATACAGCTCGACAAGTGGTGTCTCACCCCCTGAACACCTCGAGAGGCTAGGGAAGTTCCATGCCTCAACCCAAGACCAGGCCTGACTCTCCTGTCCCAAGTCTGCAGGGACCCTGCGTTCGGAGTCTGAAATCACAGGAACCCTGAGGTTCCTGCCTCACCTGGAGATGAGGCCCTCTTCCAATGCACAAACCCCAATGGAGTCCCGAGAGGCCCCTC TCONS_00234581 . 5' 242109 TCONS_00234581 . 5' 242109 EMBV3_08850 TTCCTCAAACTGTGATCTATTCTTAAAAGGGGGAAAATTTACAGTGCTTATTATTCAGAA Gene GeneID:317777|PLA2R1:NM_175051:55_cdna Constitutive 2 NULL GeneID:317777 2 GENE PLA2R1 NULL phospholipase A2 receptor 1, 180kDa EMBV3_08237 CCAGCTGGACATACTGACCTACTGGAAGAAAGAATTCGAAAGAGTGGTATCTCTGATGAA Gene GeneID:540528|NR1H4:NM_001034708:34_cdna UTR3_Alt 2 NULL GeneID:540528 5 GENE NR1H4 MGC127466 nuclear receptor subfamily 1, group H, member 4 EMBV3_19070 GAGGAGGTCTCCCGAAGTCTGCGTTTCATTGGGCTCTCAGAGGACGTGGTCAGCTTCTTT Gene GeneID:783429|LOC783429:XM_002691503:465_cdna Constitutive 0 NULL GeneID:783429 11 GENE LOC783429 NULL similar to KIAA2038 protein EMBV3_19914 CGTGCACCTATTGAATAGATGAAGGATTCGTTCCATATTTCTTGTTCATGTCCATTGCAG Gene GeneID:616319|LOC616319:NM_001101254:115_cdna Constitutive 1 NULL GeneID:616319 3 GENE LOC616319 NULL similar to SLC25A3 protein EMBV3_18596 AGTAAACAGGGTGCCCTGTGGAACCGGGTGGCCCAGAAGAGGCGGTATTCTCCGGGAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12130 TCCAAGTTAACAAATCCTGCCAAACCAGCAACACTACGTTAGATCACACCTAATCCTGAC Gene BVV0102_323777 + 0 NULL GK000014.2:23264811-23373835 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07471 AGGTAGGGGGCGAGAATGGCACTGGAAAGGCCTGGCCCTAAAGTATAGTTCTTAGAGCAA Gene GeneID:786565|DIAPH1:XM_002689261:178_cdna Constitutive 0 NULL GeneID:786565 7 GENE DIAPH1 NULL diaphanous homolog 1 (Drosophila) EMBV3_27673 CCTCAGGGCAGAGTTGTCTCCTGCTGTACCAGAGAGCCTGTTCCATATTAAGCCCACAAA Gene BVV0102_029381 + 1 EMBV3_25312 GK000023.2:41523008-41969838 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133470 TCONS_00133469 1 XLOC_081117 NonCoding TCONS_00133469 XLOC_081117 NonCoding NonCoding - 23:41554415-41577347 - TSS99669 1043 4 TCONS_00133469_4 42 2 0.95460293925254 0 0 0 0 0 0 4.47224416361854e-05 0 0 7.49514781226627e-05 2.19180378367118e-06 0 0 6.31392320638639e-05 0 0 0 0 3.42779082865109e-06 0 0 0 0 0 0 0 2.55848402661582e-09 0 0 9.22213858054373e-05 0 noncoding CTGGATGTTTGTGTTGGCCAGCTGTATTCTGTCCAGCTGGACTTGAGATGTGAATGGACCAAATGGTCTGAACACAGCATCCTAAAGTTGGCGGCGCCATGAATCAGAGGAACTGATGCCACCGAGCTGGTAGCTGCCAGACAGCTTTGATTGCTCTCAAGCCTGGACTGTTCTGTGAGAAAGAACAAACTCCTACCTGCCTAAGCCGCTCTCATTTCAGATTTGTTACATCAGCCATACCTAAGTCCTGGCTAATGCATATGCTTACCGGAGCATCTGGGAACAGTCTGTGCATTGTGCAATCGTGACGATGTGTGTGAGAGCCGTGCGCATGGAGCTTGACCTGTTATTGTTCGTGATTTGGAGGAAACTTGCAGCTTTGCTCTTTTTCAGTTTCTCTGACTTACCCTCCGCGCTTCCTTTTTAAGAACCCAGCTCAGTGCTGTTCATTTGGTTCCCTCAGTGTCCTCTGGTATGTGGTCTTCGGACCCTTTGTATGTGTCTCCACAATGGAACAGCTCCCTGTTTAGAGGTTTTTCCCCCATCGTGGCCCTTACCACCCGGGATTGAAGTGGCCCCATTCCTGGGGCCCCTCCCCGCAGGGCTGTGAACTCCCTCAGGGCAGAGCTGTCTCCTGCTGTACCAGAGAGCCTGTTCCATATTAAGCCCACAAAGCATATTTGTGAAGTGCTCATACATGTGAATGAAGGAAGGAATGGAGGAATGCATGAAAACATTGTAAAGTGGGGTGTTTATAATGATGGCCTCCTGTTATGGCTGAAAACTCACTTCTCTATGTGTTTGATGTTGGCCCATGTGGGACTTTGCAATATGGATGTCTGATGTAATAATGAGGTTTTATTTGGGAGGGACACCCTGCACAGTTAAACGCCCTTTATTCTTTATACAATCGGAGCTTTCAAATCAAGTCCTAGTCACATAACTTTCCATCCTACTTTTCTGTCGTTCTCCTTGTCCTTTGCCTTCTACCCTCAGGAAATCCCCTGTATCTGTAGCCCTTTATTTTCAAGAAGTAATCATGT TCONS_00135212 r 5' 158945 TCONS_00135212 r 5' 158945 EMBV3_13701 CACAGCTTTCCTTCGCAGGCCCCCAGCTTCAGGCCCATCAGTTTAGTCCTGCAACATGAT Gene BVT0102_060842 + 0 NULL GK000010.2:71607133-71648924 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29272 AGGTTGTGGAAGGAAAGCACCTTCCACCGGAGGTGTCTGAGCTGACTCTTTCCTGCTTTC Variant GeneID:541250|PSRC1:NM_001046501:182_cdna 44^94 2 EMBV3_16455 GeneID:541250 3 GENE PSRC1 MGC137552 proline/serine-rich coiled-coil 1 EMBV3_38710 TCAGTAACTTCGTGCCTGTCTTCTTGCCAGTGGACACGAGCCGGCTGGACTTCGCCTGCA Variant GeneID:281060|CD8A:NM_174015:2_cdna 421^537 1 EMBV3_09485 GeneID:281060 11 GENE CD8A NULL CD8a molecule EMBV3_20528 TCTCCAGGCATGCTCAATAAACCTTCTGTCCAACTTTCCCATGGCCACCAGAGCCACCTT Gene BVT0102_186501 + 0 NULL GK000019.2:14627734-14653459 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095306 1 XLOC_057680 Coding TCONS_00095306 XLOC_057680 Coding Coding LOC100847724 19:14639859-14641779 = TSS71091 531 3 TCONS_00095306_1 93 3 0.724856696195935 0 0 0 0 0 0 0 0 0 0.00276624283341048 0.00342300218180045 0.00109762119440707 7.02459703519984e-05 0.000292338240297124 1.16193503548105e-05 0.000596871744552045 0 0 0 0 0 0.000121915990326715 1.15092784691732e-09 0.00116815596683302 0 0 0 0.00119385998054815 0.00160906108700983 0.00219090841490228 XM_003583536.2 LOC100847724 PREDICTED: Bos taurus WAP four-disulfide core domain protein 18-like (LOC100847724), mRNA. 0.0 919 100.00 0.95668549905838 NM_001081957.1 Wfdc17 Mus musculus WAP four-disulfide core domain 17 (Wfdc17), mRNA. 7e-19 98.7 68.28 0.612052730696798 TCONS_00095306_1 sp|P62811|WFD18_BOVIN WFD18_BOVIN WAP four-disulfide core domain protein 18; 2e-21 83.2 50.65 0.817204301075269 1 noncoding 0 0 0 0 -0.0962839198557019 0.528133336661644 NA NA AGTATAAATTATAGCTGGGCTCTGCCCCTTCACCACACCAGAAGCCAACATGAAGACAGGCACTATCTTTGTTCTGCTGGCTTTCATCATCATGGGGCTGGAGGTGACCTGGGCTCAGAAGTCTCCTGTCAAAGGACGACAGAGACCTGGATTCTGCCCAGAGGTGCCCAGAGGTATTTTGGGAGCTTGTGTTGAAATGTGCTCCGGTGATGATTCCTGTCCCAGGGGAATGAAATGCTGCAGCCATGGGTGTGGTCATTCCTGCACAACTCCTGTCTTCCGAAAAGGTGGCTCTGGTGGCCATGGGAAAGTTGGACAGAAGGTTTATTGAGCATGCCTGGAGACCAGCCCCAGAAGATTTCTCACGAATCAATGAATTTGATGCTTGTCATAACTACAAGATTTTCACATCCATTCCAGACTCTTTTCTATGCCTGGAATTGTAGCCCTGGAAGATGAAGATCTAAAATGGTGGGATGTCTGCTTTCTAAAGAGCCTGTGTGGAAAATAAACTAAATTTGTGGCATAGTT EMBV3_13527 ATGGGAATGTGCCCCACCAGCAGAACTCTCCTCAACCACTTATTCCCCAGCAGATACCTT Gene GeneID:515548|TREML2:XM_002697232:401_cdna Constitutive 0 NULL GeneID:515548 23 GENE TREML2 NULL triggering receptor expressed on myeloid cells-like 2 EMBV3_10319 CAGCGGCATTCCCACATCTTCTGAGTAGAAGGACCAAAATGTTGTGAACTGACCGAATGA Gene BVT0102_100594 - 1 EMBV3_07747 GK000002.2:108286885-108891116 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103385 TCONS_00103386 1 XLOC_062097 NonCoding TCONS_00103386 XLOC_062097 NonCoding NonCoding - 2:108559514-108560786 - TSS76777 1062 1 TCONS_00103386_1 34 0.163841807909605 2 0.166011014948859 0.000716962078610805 0.00118237654881848 7.80979731099757e-05 0.00161833225780006 0.000790148697963878 1.67147487554178e-05 0.00084545218401433 0.000228129753227769 2.20245863934849e-05 1.92331403065022e-05 4.24553409400646e-06 0 0 0 3.21953411115053e-05 0 0 0 0.000134802053562069 1.44327838859664e-06 6.28802781177784e-05 6.70783052135291e-06 0 7.48064460593571e-10 0.00105012461635484 0.000430960337581474 0.000435649304876279 0 1.315955042665e-08 0 XR_234539.1 LOC101905798 PREDICTED: Bos taurus uncharacterized LOC101905798 (LOC101905798), 4e-06 57.2 76.19 0.0743879472693032 0 noncoding 0 0 1 1 0.00385262437487604 0.97902261441415 0.00519444478049556 0.925643921957931 CCAGAGCCAGGGTTCCCCCATAGAGTGGGGCAGGAGTGCTTGGGCCGGATTCTTAACTTCTCTGAACTTCAGACTGGAGAAGAGGAAATGAAATGATGCAAGTTTTCCTGTTCTGAATCCTCTGGGGCTCTCTGCATCTCGTCAGCTCTGAACATTTTCTGGACCTTGCTTCCTACTTAGCTCAGACTCTGGTGATAACAGAAAGTCAGAAATCCAGTCGACAAAAATTGGGCCGTGAAGACTGTACACGTACGTTTTTACAAAAGGATATAAGGAGACTTAAAACTTTCATTCGGTCAGTTCACAACATTTTGGTCCTTCTACTCAGAAGATGTGGGAATGCCGCTGATTCCTTAACTTCCTGTGTCTCAATTTATTCATCAGTGAAAGGAGGGTAACCACTGGACTTGTTTGATGGGATTGTTGGGAGGATTGAAAAATATAGGTGAAGTGTTCATGCAGACTTGGCACACAGTAAACACTGTCATCTCTTAACTCTTCATGTGATTATTATTTCAGGGTCCCCACGCATGCTGGAATGTATACAGAAGTAGTGTGTACAAAAGTTGAATTATAATATTCTACACATGAAACGTATATAATGTCAGAAACCAATGTTACCTTAATTGAAAAAAAGAAAATTCTGCAGAGCAGTAGTTGTGTAGTCCCTACACAGTTATAGCCTGTAAGTTGCTTAACAGATGAGCTGGGGGATCAGGATGAATCCTCTGGAGAGAGCTGCTCCCTAAAACGCTGGGAGAAAAAGTCTGAATGCAGACCTGACCCACGCTGTTCAACTCTTCTTTTGAGCCCTTAGCTTTTTGCTTGGCACACTCTCCACAATGGCAGTTCTAGGCTTTATTACTTGTATCTTGAAGTCATTTTTGAGGCCGTCTTCTTTGAGTACACAGAGTCTTATCAGCACCCCGATTCTTCCTCTGCTATAGTTCTCAGGCCCAGCTCTCCCTCCCTGTTTCTACTGACTCCAGCTTGCCTTCCTCTCCCCCACCCCCTGGTCTGCTGCAAAGCTGGAGGCCAGCAGCTTTCAACCCTGACCACACC TCONS_00103383 s 3' 272631 TCONS_00103383 s 3' 272631 EMBV3_28142 TACCAGTTCAACGTCATCCTGCCCAGCGGCCCCCAGAGCATCTATTTCCTGGATCTCACT Gene GeneID:540438|STOML1:XM_002696639:193_cdna Constitutive 0 NULL GeneID:540438 21 GENE STOML1 NULL stomatin (EPB72)-like 1 EMBV3_18714 GGACCCAAGAGTCTGCATTTTTAGTGAGCACCCTACATGCTTCTCTTAGAGGCACTCCAT Gene GeneID:100139148|LOC100139148:XM_002691987:5_cdna Constitutive 2 NULL GeneID:100139148 12 GENE LOC100139148 NULL hypothetical protein LOC100139148 EMBV3_38960 ACTGTGATATAGCAACCCTTCCCAGGTTTATTGGCAGGTACAGGTGTGATCTCAGAATAC Gene GeneID:534656|CAPZA1:NM_001083480:146_cdna Constitutive 0 NULL GeneID:534656 3 GENE CAPZA1 MGC138080 capping protein (actin filament) muscle Z-line, alpha 1 EMBV3_31927 CAGCCCATTCCAGCTTGCTTGAGACAAGTTAGGTGTCCTGCTTTGGGCTGCATGACCGAA Gene BVV0102_017818 + 0 NULL GK000020.2:10108492-10114338 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114444 1 XLOC_069295 NonCoding TCONS_00114444 XLOC_069295 NonCoding NonCoding - 20:10111274-10111924 - TSS85368 569 1 TCONS_00114444_1 57 0.585237258347979 2 0.126348228043143 0.000143469435885917 0 0 0.000649446233572292 0 0 0.00010249045340446 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000224078625960316 0 0 0 1.21765827165481e-05 0 0 0 7.67865304418179e-05 0 0 noncoding 0 0 0 0 0.336179184664162 0.177041481135108 0.0213435425213529 0.661075865124481 CTCTGGATTAACTTCGAGGCAAAAGGACAGGGCACTGGAGTCATACAGATGTGGACTTAAATCCTTTCCATGACACAGCAGCTGCACTGGTCCTGTTAGTACCGCGGTTAAAGAGCATGAAACCTGGAGAAGGCCTTGGAGATCTCCCCAGAAAGGCCCTGGGACTAGCAAAACTGAGCACTGAACTTTGTAGACCTGCAGGAGGGATTCCAGGGAGTTTGTTGCCACCCTGTGCTTGTTTATCTCCAGGGAGGCCTGGAGCTATGGCATTGCCTATTGGCCAAGCCTAAGTGAAACATACTAACTACGACGAATGTAGCCCTGTGCTAGAATCTGAGAGGACAGGGGCAGCCCATTCCAGCTTGCTTGAGACAAGTTAGGTGTCCTGCTTTGGGCTGCATGACCGAAGCGGCAGAGAATATCCCTCCTTAGTGAGAGAGTGATTTCCCTGAGACAAAGGTACCTAGCACGTGTCTAGGTGGTTCATTACCTAAAATGAAGCACGGACTGTATAGCGGAGGAAGGCTCCTAGAAGCTGGGCCTGGAGTCTGAGACCACGCTGATGTTGG TCONS_00114442 TCONS_00114443 s 5' 2784 TCONS_00114442 TCONS_00114443 s 5' 3334 EMBV3_12449 GATCTGAAACCATAGCCCCCAGTGCACCCTCTGCACCAGAAAGGCGGCCTGACATGAGAA Gene GeneID:512786|PRAP1:XM_002698504:607_cdna Constitutive 0 NULL GeneID:512786 26 GENE PRAP1 NULL proline-rich acidic protein 1 EMBV3_08076 GAATCACTCTTAAGCCAAAGGCATCAACCTGGCAGCCCCTGGATGGAGTCCCTGTTACTT Gene BVV0102_225387 + 1 EMBV3_40090 GK000023.2:6785245-6922379 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33958 ACTGTCTCAGACCTTAGGTAACAAACCTGCAGCTGCTTTTCTAACAAACTGTTGATCAGC Gene GeneID:614279|MGC133632:XM_002692797:93_cdna Constitutive 3 NULL GeneID:614279 14 GENE MGC133632 NULL hypothetical protein LOC614279 EMBV3_12522 TGACCTGCCTCTGGAAGCTTGGCCAGCAACAGACAAGACCAAGCGGGAGGAAGTGGATTA Gene GeneID:281621|AMELY:NM_174240:8_cdna Constitutive 0 NULL GeneID:281621 X GENE AMELY AMGY amelogenin, Y-linked EMBV3_29302 GTTACTGTGGCAGTCATGGGTAGAACTCATGAAAATGCATCACAAAGGATCTAATTCACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25391 AAATAGTGTGGTCAGGGGAAGGCCTGGCTGGGAGCAAAAAGCTGAAAGGTGGAAAGAATG Gene BVT0102_371612 + 0 NULL GK000025.2:33989663-34018455 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09025 ATCTGCCGTCCCTTGCACTACCCTAATATCATGACTGGGCATCTCTGTACCAAACTGGTC Gene GeneID:509128|LOC509128:XM_002690753:496_cdna Constitutive 0 NULL GeneID:509128 10 GENE LOC509128 NULL similar to olfactory receptor, family 11, subfamily H, member 1 EMBV3_14868 CTCTAGTGTGTGAGGATGAGACCCCTGAGCGCCAGCTCATCCTGCGAGGCATAGTCAGCT Gene GeneID:280789|F12:NM_001075119:2_cdna Constitutive 0 NULL GeneID:280789 7 GENE F12 MGC140488 coagulation factor XII (Hageman factor) EMBV3_27292 TAGCCAGTTCTTTCAGTACTAGTCAATGAATAGTCTGTTTCATTGACCTTCAGTGTCGTC Gene BVT0102_420084 + 1 EMBV3_25258 GK000017.2:11764108-11830251 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076657 TCONS_00076658 1 XLOC_046887 NonCoding TCONS_00076658 XLOC_046887 NonCoding NonCoding - 17:11776048-11784780 - TSS57511 3831 1 TCONS_00076658_1 130 0.501435656486557 4 0.561676783873554 0.0010749397181531 0.00118653824830887 0.000834264024448594 0.000496830512186878 0.000840320175352026 2.22152420544967e-07 4.45683712494924e-05 0.000299321541131964 0.000314883693410196 9.0692779598233e-07 5.07992203319967e-07 0 4.85875676342528e-05 5.78598445714612e-05 4.08243326507592e-05 5.85324545265664e-06 3.67162124324939e-06 1.65923524786079e-06 0.00024086448632777 0.000813511962902543 0.0003174685523304 0 1.34809058749964e-07 0 0.000843447348636382 0.000774925159076292 0.000389803071697104 5.23292685760674e-05 0 0 XM_005205621.1 ASB15 PREDICTED: Bos taurus ankyrin repeat and SOCS box containing 15 (ASB15), transcript variant X1, mRNA. 1e-95 356 87.03 0.0754372226572696 0 noncoding 0 0 0 0 0.00398880941185941 0.981273693548939 0.0171685912647316 0.716136778509583 CTTCAACCATAAGGTAGATGTGAGAAGGTCTCTGGAGGAAAAGACATTTCCTGAAATCATTTTGTGATCTTCCTCTGGCAAAATGTTTATTTGCAAGTGAATTCAGTGGACGAGCATGGAGAACAATGAATGTGCTGGTATTACGTATGTGCCACGAATTTCTTTCTTTCAGGGATCATGTCTTTGCTGCTGCTGCTGCTAAATTGCTTCAGTCATGTCTGACTCTGTGCGACCAGCCCACTAGGCTCCTCAGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGCCACTCGGTCATGCCCGACTCTTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCGCCCAAGGGATTTTCCAGAATTCACCAGGAAGTCTACTTTGTCCAAGTCTATTCTCAAGCAGTGCTATCGCCATGGGGGGAGTACATGGAACATGGGCTGTGGCTCTGTGTGGTGTTTCTTGAGAGGCTGCTATGAAGTTTTATGAGTGGCAGTGCATGCTTGCTAAGTCGATTCAGTCATGTCCAACTCTTTGCAGCCCTATGGACCATAGCCCACAAGGCTCCTCTGTCCATAGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTACCTTGCCCTTCTCCAGCTGATCTTCCCAACCCAGAGAAACTGAAGCTGCATCTCTTATGTCTCCTGCATTGGCAGGCAGGTTCATAGCCACTAGCACCACCTGGAAAGCCCAGCAAGTGGCAGAGGGTTATGGATAAGGAGTCGTCATTATCAACAAGAACAAGAACAACCATCAGATGATCTATTGGGCATCTTTACATTCCATCTCTGTTTTTGTATCTGGGAAAATGTAAAGTTTGGAGATAGAGAATTTCTGTATTACTTGTGTGGATGTGGGATAAGCTTCTGCCCAGGAGATGGATGTGTGGTTACATGCTTCCTTTTGGGGGTGCACTGTAGTTTGTTGTTAACTAAAATATTCGGCCAATATTTTTGTCTTTGGTTCAGGCTAAGGCTTTTGGAAGGATGACTAGAGGAATGTCTACTTCAGTTGTCATCCCTAAACATTCAGCAGTGTGGTCATGTAAGTTACTACCATGTTGAATCAGCAAAACAATGCCAACTACATGAACAAGGCATAGAATTCAGATTTACTACCACTACCTGGATCAATCCTCAAGGAAATCAACCCTGAATATTCACTGGTAGGAATGATGCTGAAGTTGAAGCTCCAATACTTTGGCCACTTGATGTGAAGAACTGACTCATTAGAAAGGACCCTGATGCTGGGCAAGATAGAAGGCAGGAGGAGAAGGGGATGACAGAGGAGGAGATGGTTGGATGGCATCACTGACTCAATAGACATATTGAGCAAGCTCCGGGATATGGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCTATGGGGTCACGAAGAGTCAGACATAACTGAGCAACTGGACAACAGCAACGTGGATATTCACTTTCAAACAGATTACATTCCATTTGTAGTTCGTGATGAAAAAAAATCTCTGTAGATTCTAAATGTTGAGAGTCTATCCATCTGTTGAAGTATAAATGTAAATGTTATTGCCAGAGTGAAATGCACCAATACTTAATGATTGTAGAAATTAAAATTATTAGAATAATCAAAATATTTCAAATAATAAATGTATAAGGAAATAGATCCAAAGTAAAGATTAATATTAAGATAGAACATGTTAGCTAGATAACTTTAGAAAGAATATTATATCATTTTAGAGCCAGTGAATATTTATAGAATTTAAATAGTACAAGAAAGAATAATAGAAATCATAGCACAGAGATTAGAATTAATCTTTGAAGTTGTATTACTATTCAAATATTAATGAAAATAATCTTTAAAACTATTCTTATTGTACAGTATTTTTTAGTTATTTAATTCTGTTTAGGCCATGAGTCATTCAGGAAAAAATTCTCTTTAGAAATTCTTCGTATCTTGAAGGATGGATAAAAAGTAAAATGTTAAGTTTGACCTATTCAATTTGATAAGGTGGGAAAACAACCCAAATCAGGTACACTATCTGTATTAAACCATCTTTGATCTAGACATAACAAAGAATATACAGAAAGGGAGACAGCGTTAACCAAAAAAGAAGAACTCCTAAATGTGCCCCTCTATCAAACTCAGTTGAAAGAATGAATCTATTTAGTTTCACACATGATGTGTATGGTGAACACAGGAGCAACCCATCAGCTGACAGTTTCAAGGAATTGTTCTTCTTATGTTAAATTTTAAATAATTTACTAGTGGTTTTAATGAAAAATTTTAGTAAAAACTACTTTGGGGGCAAAAATCCGAAGATTCTGACATCTAAGAAATTCAGTCTATGGTGGTGACCTAAGGGTTTGGTCTTAGATTTGGCTGAATATTGATTTTAACATTTGTTTATTTTGTGTTACCACATAATTTGGTGCATATCTACTTTTTTTTTAGAGCACTACACCTTCCCTGCTTTATAATAATAATAATAAAAAAAGAGTGAGCTCATAGTGCTACTAATGAGATAGGACATCTTTCCTCTGTGTTTTTCTTTGTTATTGATTCACTTTGTGATTTTTTTTCTTCTCTGAAATGTTTGTTTTTGTTCATTTTCTTTTTGTTTCATTTTTGTTCATTTCTTAGGAGGTGATAGTTATCTTTTGTTTTCTTACAGCTTTGTAAGAGTTCTTCAATTTTGTTTATCTGTGTTTTATCATTCATTTTGTAGCTTTTGTTTCTCCACTCCTTTTTTGATGAACAGAAATTTAAATTTTATTTGTCAATTTTATTGGTATATTTTGTTTGAAAAGTTCTTTCCTAACATGAGGTTACAAAGGTATTCACCTATATTTTTTTTCTAAAAGTTCTGAAGTTTTGCCCTTCATATTTAAATCTTAAATCAGTTCAAAATTTCATTTTTTGTGTGTCTGTATTATGACAAGGATCACATTTTATTTCCATTTGAATAGCCAGTTCTTTCAGTACTAGTCAATGAATAGTCTGTTTCATTGACCTTCAGTGTCGTCTCTGGCATAAATCAAGCTCCGATCTGTGTGTGGGTCTGCTTTTGACCTCTCTTCCACTGATCAATTTATTTATTCATGTACAATTACTAAATTTTAAAACTACCATGGATTTATAATGTCTTGATTTTGGTGCAAAATGTGTGTTCCTAACTTGTTCTCTTTCTCCTTCAACAGTATCTCAACTATTTGTATGCTTTGCTTCTCCTTATAAATTTAAAAGTTCGATCGTCAATTTATTTGAAATTTTTGTTTCTTGAAGTAAACTTTACACACCATAAAACACAGAATTTTAATGTACAATTCAATGAGTTTTGAAAAATGTATAACCGAAAGTGTACAAGTGTATTGTTCAGTTGCTAAGTTGTATCTAACTTTTTTGCAACCTCATGGACTGTAGTCCCCCAGGTTCCTCTGTCCATGGGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTGCCTCCTCCAAGGGATCTTCCCCACCCAGGGGTTGAACTTTGCATCTCTGGCATCTTTAACATTGGCAGATGGGTTTTTTACCACTGAGCCACCTGGGAAGCCACAGAACCATATATAGCCAGTAGCCAATCAAGAAGTAGAATGATTCTCTCACCTCAGAAAGTTCCCTTATGATCCCTTTCAGTTCCTCTCTACTTGCCAGAAGCAAGCACTGTCTGGTTTTCTGTTATCATTAGTTTTGTGTGTTGTTGGAATCTTAAATAAATTCATTTGGTATGTATTC TCONS_00074837 r 3' 24238 TCONS_00074837 r 3' 27655 EMBV3_24251 ATGCCTTCCAATGCAAAGGACACAGGTTTGATCCCTGGTCAGGAAACTAAGACCCCACAC Gene BVV0102_130906 - 1 EMBV3_24821 GK000029.2:43794487-43825076 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14094 CAGAGGAGATGTTGTCAATGGAAGAAACCATCAAGGCCCAAAGCGAGCAAGAGAATCCCG Gene GeneID:353120|BRCA1:NM_178573:52_cdna Constitutive 0 NULL GeneID:353120 19 GENE BRCA1 NULL breast cancer 1, early onset EMBV3_07986 TGCGAACTGGACAGAACACTTGGGAAAGTAAAAACATCCTTGCTGTGTCATTTGCTCCAC Gene GeneID:521261|PCMTD1:NM_001081526:32_cdna UTR3_Alt 3 NULL GeneID:521261 14 GENE PCMTD1 MGC143031 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 EMBV3_22916 GAAGAGTACGGTTTCGTACAGGACAAAGCAGGGAACCCAATGAAGTGATGAAGCCCAGAG Gene BVV0101_011137 + 0 NULL GK000013.2:62814184-62822736 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11136 ACTTCTGGTGATTGTCCGTCACCTGAGGATGCGCCCAAAGACCGCGCCGCTCCTGTTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01205 CCGGGTGTCTCCTCGCCCGTGTTTTCTCAAGTGTAATTCACGCACTTTGTACGCATCCTT Gene GeneID:520505|LOC520505:XR_084704:176_cdna Constitutive 0 NULL GeneID:520505 7 PSEUDO LOC520505 NULL similar to SIN3 homolog B, transcription regulator (yeast) EMBV3_14034 GTTGATCGGCATCCCTAGCCTTGGGGACAGGTGCACTCCCTGTACCGCAGGACAGGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09575 CAAGCTGACAGCCCAGACAGACCAAGGTGACCAGGACAACGTGCAATAATGCCAAATGTT Gene GeneID:539467|PKDCC:XM_002691245:227_cdna Constitutive 0 NULL GeneID:539467 11 GENE PKDCC NULL protein kinase domain containing, cytoplasmic homolog (mouse) EMBV3_41393 TACCATTTCATCTCAGACCGTCAGTTTTAGCCAGATCAAGAAGCCAAGGCCAAGAAGTGC Gene GeneID:506046|CCDC90B:NM_001101863:16_cdna Constitutive 0 NULL GeneID:506046 29 GENE CCDC90B MGC155307 coiled-coil domain containing 90B EMBV3_15689 TCCAGATTGAACTCATGGGAGGGATAAATTGGGAGACTGGGACTGACATATGCATACCGC Gene BVV0102_194936 + 0 NULL GK000010.2:103459381-103508677 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27089 GTCCTTTGCACTATTCGACTGTCATGAACCCTAGAGCCTGCTATGCCTTGCTGTTGGCTC Gene GeneID:505186|LOC505186:XM_002690692:309_cdna Constitutive 0 NULL GeneID:505186 10 GENE LOC505186 NULL similar to Olfactory receptor 4N5 (Olfactory receptor OR14-33) EMBV3_01253 TCTCCACTCGCTTCTCTCCTGATAGTACAAGGAATCTCTGGCATTCTGGACCTGGACCAT Gene BVV0102_093344 + 0 NULL GK000019.2:56818431-56842381 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094725 TCONS_00094722 TCONS_00094714 TCONS_00094723 TCONS_00094717 TCONS_00094716 TCONS_00094726 TCONS_00094724 TCONS_00094718 TCONS_00094721 TCONS_00094719 TCONS_00094720 1 XLOC_057529 Coding TCONS_00094726 XLOC_057529 NonCoding Coding GRB2 19:56815519-56820269 j TSS70787 2282 1 TCONS_00094726_7 127 3 0.520109496736155 0 0 0 0 0 0 1.28085736254994e-05 0 0 0 0.000561206907836609 1.03830633697983e-26 0 0 0 0.00716793462331039 9.79564615990813e-09 0.00526756872234519 1.62118764980814e-168 1.03880197302208e-102 4.4261558628475e-47 0.00332656690592959 0.00289842762068924 0.00379325656891886 0 8.54733567305357e-322 8.378756904935e-276 9.16089240990582e-11 1.21411375229028e-08 8.70183083379817e-90 NM_001034630.1 GRB2 Bos taurus growth factor receptor-bound protein 2 (GRB2), mRNA. 0.0 735 99.51 0.180105170902717 NM_002086.4 GRB2 Homo sapiens growth factor receptor-bound protein 2 (GRB2), 0.0 1058 88.88 0.357142857142857 0 noncoding 1 1 1 0 -0.016666430273132 0.922174562515771 -0.0510785668218014 0.417495248661715 GTTCCTTTTCTCTGTGAAGATGTGGGAGGTGGTTTCAGGTTTGGAAATGATGTACAGCACTTCAAGGTGCTCCGAGATGGGGCTGGAAAGTATTTCCTCTGGGTGGTCAAGTTCAACTCTTTGAATGAGCTGGTAGATTATCACAGATCTACATCCGTCTCCAGAAACCAGCAGATATTTCTCCGGGACATAGAGCAGGTGCCACAGCAGCCAACATACGTCCAAGCCCTCTTTGACTTTGACCCCCAAGAGGATGGAGAGCTGGGATTCCGTCGGGGAGACTTTATCCACGTCATGGATAACTCAGACCCCAACTGGTGGAAAGGGGCTTGCCACGGGCAGACCGGCATGTTCCCACGCAATTACGTCACCCCCGTGAACCGGAACGTCTAAGAGTCAAGAGATTATTTAAACAAAGTGAAAAATTTTAAACACACACAAAAGAATTAAACCCACGAGCTGCCTCTGTCAGCAGCCTGTGAGGGAGCTCAGAACACCTGGTGGGTCACCTGGTGACCGGCTCACTTTGGTTGGAACTCTGGGGGGTGGGAGGGGGAGTTGGATATAACAATGCCAAAACTTACCTATAAATTAAGAAAAGAGTTTTTATTACAGATTTTCACTGCTGCTCCTGTTCTTCCTCCTCTGTCCTTTTTTCATCCTTTTTCCTCTCTGTCCATCAGTGCATGACATTTACTGCCACATATAGTCCTAGCTGATGCCAATAATAAAAGAAAAGAAACCACGTGGGCTGATATTTTCTCTATGCAAAATGTCTGTTTTAGTTGGGAAGACTTCGAATAGCCGCTTCTGTGTTCTGCGTTTTATATACACTCACAGGAGCAGGCAGTCCCTGCCCTTCAGCTTCTGCTAGAGGAGGGCGGGCGGGAGTCGGGGTGACAGGAGGGGTTGGTGCCCCCCAGGGCTTCCTGCGAGCCAGGCCCCAAGCCTGTGTCTTTTCTATATCCATTTCCCTTTCAAGTGGTGTTCCTGAGCATGCTGTTTTTCATAGTGCCTTCTGCCTTATTTCGAGGGTTGCTTCTGAGTGGTGTTTTTTTCCTTGTTTGTTTTATTTTAAAAATAAGTTAAAGACAGTCAGCCAATTTGTCTCCTACTCTGTGTAAATATTTTCCCCCCGGGGAGGGGAGGACAGGGTAGAGAAGAGGAGACAAGCAAGAGGAGGATGTGGGGGTCCTGCCTGTGGGCAGCCAGAGCCTCTAAGGTTCAGCTTTAACATTTGTAGCCCCTGGAGGTTAAGGGAGCCAGGGTGCAGTGGAACCAGGTTGCCGCCTTCCCACGTCTGACTGCATCTGGTGGGGGGTTGGGGTGGGGGCTGGGCCCTTGACCTTGCAGTCTCGGTTGTTATCTGTCCCCACCTTAGTCTCAAACACCCACAGTAACCAGTCTCTGGAGCCAGCCAGTTTCAAGTGCAGGAAAGTCCAAGGAGTTTAAACTGTATCAGGTTCTACCATGTTCTATACTGGGGGAGAAAATGAGCATTTTTGCTTCACCTTTCTTGCTCTGAAAGCTGAGGGTATCCGTTAATGGCTCTCACCTGTTGTGTCCCCTGCCTGACGCACCCAGATGAGCTTCAGGCTGCGTTCGGGAAGCAGCTGGGTGGTTTTTCGTTTCTGCATTCACAGCGGGCTGTGTTCATAGCTGCTCCATCTGGCCCCCCGAGAGGGAAGTGTCTCTGTGACGCAGGGGCAGGCGGAAGGAAGGTTGGAACTAGGAATGTTGAGTCCGTGGCAGAGCTCTGTCCGTCCGCCTCCTGCCGGCTTCTTGTCCCTCATGGTGATGCGCCATGAGCATCCTCTCCCCACCCCCCCATTCCCACAGCAGAGACAGAGCCGCTGGGGGTTGGTGGTGGCCTTCAACTCCTGAAGTGGTCAGTCAGCGTCTCTGCTGGACCTGGTCGTGGACCAGGCTTGGCCTGGAGCGCCTGGGGCCCAGGAGGCGCTGCCCTCCTGGACAGAGCATCCGCCACTCTCCACTCGCTTCTCTCCTGATAGTACAAGGAATCTCTGGCATTCTGGACCTGGACCATTTGATTGTTTTATTTTGGAATTGGTGTATATCATGCAGCCTTGCAGAACTAAGTTTTGTGTGTATATATTTAAAAAAATCAGTGTTTAAAAAGACGTATGTACTTAATCCTTTAACTCTGCGGATAGCATTTGGTAGGTAGTGATTAACTGTGAATAATAAACATACAATGAATTCTTCACTGTATATTTTTTCTTTTTTTTTCACTCCTTTGCCTTAAAGTAAAAAACCTAGAG EMBV3_25040 GGGTCGGGAGTCTTGTGGTATTTGGATTTTGTCGGAGTTTCTATGCAGTGCTCAACTGCT Gene BVT0102_009262 - 0 NULL GK000013.2:12833139-13036989 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041994 TCONS_00041999 TCONS_00042001 TCONS_00041993 TCONS_00041997 TCONS_00041998 TCONS_00041990 TCONS_00041989 TCONS_00041987 1 XLOC_025572 Coding TCONS_00041993 XLOC_025572 Coding Coding USP6NL 13:12700165-12839977 j TSS31359 10062 1 TCONS_00041993_9 814 0.190518783542039 15 0.928138701532784 0.00167207503415218 0.000793135599535186 0.000657912149977898 0.000354739864648207 0.000375742056088479 0.000560496047880032 0.00030250587556695 0.000424691791562958 0.00163105757702284 1.36366477404687e-14 8.24738217292487e-18 2.11914656688383e-17 0.000149064102073561 0.000467656908411453 2.41355245687922e-05 2.33989525030824e-12 8.24677119405718e-14 3.26087860185195e-11 0.000491392550616933 0.000859561878086149 0.000673718871492367 1.74131895088603e-14 1.28604509444536e-13 5.39274035848431e-14 0.0038227373450006 0.000814611965116958 0.00070807996470262 3.2589721929457e-16 1.46658797663452e-16 0.000154783986245441 XM_005214086.1 USP6NL PREDICTED: Bos taurus USP6 N-terminal like (USP6NL), transcript 0.0 8367 100.00 0.460942158616577 NM_014688.2 USP6NL Homo sapiens USP6 N-terminal like (USP6NL), transcript variant 1, 0.0 2917 78.58 0.334128403895846 TCONS_00041993_9 sp|Q92738|US6NL_HUMAN US6NL_HUMAN USP6 N-terminal-like protein; 0.0 1304 79.16 0.998771498771499 1 coding 0 0 0 0 -1.47176736604946 0.000830054157809048 -0.0976700158903235 0.0916066993042276 AGGTACAAGTGTTGGCTTTGGCACCATCTGTTAATTGGCTGGTCATCCTTGGGAACTGAGGCAACTTCCTGGTATGGCAGATGCAAGCTGGGTCCCAGTGCCAGGCAGAGGTTGCAGGGTCAGTTTGGTTTTTGGTCAGTTCAGTCTTTGCCCATGGTGTTCCCATCTATCTCAAGGACATGTATTCCTCTGAGAAACACTGGACAGCAGATTTGGGTGTAGCGCCGGATCGGGACCACATACAGAGACATCTCCAGTCATGGATTCAAACCAGGATGTAGCACTTAAACTTGCCCAGGAGCGAGCCGAAATAGTTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACGGATAGATTTGGCTTCTTACATGAGGAGGAGCTCCCATATCACAATGCAGCTATGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACTAAATGGTTGAAAATGCTAAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGAGAATTTACAAAGGAATCCCACTCCAGCTCAGAGGTGAAGTCTGGGCACTGCTCCTGGAGATCCCAAAAATGAAGGAAGAGACCAGAGACCTGTACAGTAAATTAAAACACAGAGCACGGGGTTGTTCGCCTGATATCAGACAGATAGACCTTGATGTCAACCGCACATTTAGGGACCATATCATGTTTAGAGACAGATACGGTGTGAAGCAACAATCCCTGTTCCACGTTCTTGCTGCATATTCTATTTATAATACGGAGGTTGGATACTGTCAGGGGATGAGCCAGATCACAGCCTTGCTCCTCATGTATATGAACGAGGAAGATGCCTTCTGGGCCCTGGTCAAGCTGTTCTCAGGTCCCAAACACGCCATGCACGGATTTTTTGTCCATGGTTTTCCCAAACTCTTGAGGTTTCAAGAACATCATGAAAAAATACTGAATAAATTTTTGTCCAAGCTTAAGCAGCACTTGGATTCTCAAGAAGTCTACACAAGTTTTTACACAATGAAATGGTTTTTTCAATGTTTCCTTGATCGGACGCCCTTTACACTAAACCTCAGAATATGGGACATCTATATCTTCGAAGGAGAGCGAGTTCTTACTGCTATGTCTTACACAATCTTAAAATTACACAGAAAACATCTTATGAGATTGTCCATGGAAGAACTTGTAGAATTTCTTCAGGAGACCTTGGCAAAGGATTTTTTCTTCGAAGATGACTTTGTAATAGAGCAGCTCCAGATTTCTATGGCAGAACTGAAGCGGGCAAAGCTCGACCTTCCAGAGCCTGGCAAAGAGGATGAATTTCCAAAGAAACCTTTGGGGCAGCTTCCCCCTGAAGGTCAGTCAGCTGGTGTTACTCACCTGAGCAACGGACAGAGGAGCGTGGGCAGGTCGAGTCCCCACCCTGGCGGTCGGAGAGGCAGCGGCTCGCCCCACAAGATCCACGAGCCCTCCCCACCCCACCCACGCCGGACCGGCACCCCCGAGAGGGCGAGGCAGCAGCGGCGTAAGTCGTCGGACGAGGAGGGTAAACGGCTTCGCGACGAGGCGCAGGCGCAGGCGCAGGCGCAGAGGAGACTCCCACCGGGCGCCCAGGACGGCTCCGGGCAGTACAACCACGCGGCGGCCAATCAGAACAGCAACGCCACCTCGCGCGCACGGAAGGAGTTCGCGCCCCGATGGCACAAGCCTTCCGAGGCTGCGGTTCTGGAGAAGACCGCCAAGTCCGCTGTGGAAGGCCGGAGCCGGGCGGCACCCCCCGCGCTCGCCGACCCCCGGGCTCCCCACGTGAGGCAGAAGACGAAGGTGCTGGATGCAGATGAGGGCAAGCGCGGCTCCACGGCCTCTCAGTACGACAACGTGCCCGAGGACGGTCCGGGAGGCGCCGTGGAGGAGGCGCTGGAGCGCGCGCGGGCGCAGAGCCCCCGGAGGCCCGCCGAGCCTGGCGCCAGCCCGTCCAGAGCCCCGCCCAAGTTCGCCTTCAAAGTCCTGCCTTCAAGTTACGCCCAGCACCCGTTCCTGCCAGACGGGGAAGATCGCGGGCCTGCGCACCCCCCTTCGTACAGTAACCCCCCCACCTACCAGGGCAGCTCTCCAAAACGGGTCCCCGCCGCCAACAGCAGCTTCCCGTTTCCCCCCGGGGCACACACAAATCCTTCCCGGAGACCTTACGGCTCCACACTTTCAATCAGTGCTTCTCCAGAGAAATCTTACAGCCGCCCGACTCCTCTGGTCCAGCCGTCGAGTCGAATAGAAGTTCTCCCTGTTGATCTTGGTGCCGGCGGATATTCGGGCAATTCAGGGTCCCCAAAGAATGGGAGATTCATCCTTCCTCCAGGGGATTGTTTGCCAGATAACAGAAAATGGTCAGAAGTTGGTTACACGTGGAGACCAGAGATGCACGGACAGCCGTGGACAAGAGATGTCAACCGTGGCCACTTGAGCAGTTTCCCAAGACACCCCACGTTTCACCACGCCCCCTATCAGGACCACTCACTCCCCTCAGTCTCCGTAGATGGTCCAGTGCGGTATAGAACTTCCCCAGCTCTGGAAGACGCCACTTCACCCGGGTTTCAGTATTCAGGGCCCTCGCCTCCAGCGTATCACTACAGAAATCGGGATGGACTCTCTATGCAGGAGTCAGTATTGCTGTAAGAATTCATTTGTACTTGCTGCAGACAAGAGAATAGAAACCGTATGAGACCTGAATTGCTATGTTTATAATTGCCAAAGCAGTATTTTATACGATTGTAAAGAACTCACACAGTTCTCATGTATGTCAGTAATAAGAATATATGGAAGTGATTTCATCCCCACCTAGATGCTGCTTAAAGACGAGCTTTTAACGTGCATCATCACCGAACCCATTAAAAGGAATTTAACCTGGAAACATAGCAATAGCATTTAGGGATGCACGCACAGTTTCATTAATATCTTTCTCCAAAATCTGAATATTTGTACTCTCTTAGCCCATTCTATTTTGAGTAATGTTACAAAGCACTGAAAAGCAGTAGAATAGATATTTTTAAGGCTCTACCTAGTGTATGTGTTTTTTAATAGCTACTATATAGGCATCTACCCATATACAGTCAAACACAGAACTAAAAAAATGTTAAAAGAACTTTTAATCTAGATCCATGGAATAATTTATTCTCCTTTTCCCTAACTTATCTTTTAGTCAGATTTTGTCCGTCCACCGCCACGTCCCCTCGTTTTATTTTTAACCCAGGTCCTAAAGTGACTTGAGGGTTTGCCCTGACTTGATTCAGCATCTCATGGAATGCTCAGCTTTCTCATTCAGCTTTCAGTCTGAAAATTAAAGACATTGGAGAGAAAGGCTAACCACTTAATGGTGCTTAAAAAAATCAGTGCAGTTTAAGTTTTGTTTTCAGAAGTGCAGCACGCAGTGTGTCCATGTTCACAGAGAAGTCCGCTTTTGTGTGTCTGTGCCCTTTTTTCTGGTCTGACTCCTACAAAGCTCAGAGCAGAGTATGCTTGCCAGACGCCCAGGAAGTGTGTGCATAACTCTCCAGTGGATGCCAGCTGAAGTTGCAAGTTACCGATCACCAGTCACTCATAGCAGAACCAACTGCTTTGAAATTCATTTGAAAGCAGGATTAATAATATGGTCCTTTCTTACTTCTGTCCCTTAAATTCCTGTGAAACCTCCCTACAAAGGGCAGGGAGATACTTACATGGTCTTTTCCTCGCCCTCTTCCTTTAAAGAATGTAGTCAGTGGATATTGCTGCTCTTAGGCCATTAAATTATTGCTTTGTAAAATTGTAAAAAATGATCCTAATTATTACTAGGAATCTCAGATTTTGGTCCTTTTTTTTTTTTTTTAAATAGCGTGGCTATCATTTTTTCAGAAATCTTTTTTTTGGTTGGTTGGTTCAGTGAAAAAAGTTCAGTTTCAAAAGGTAACAAATCAGCAATGTATTTCAGAATATTCTTTTACACTACAATGACCAAAACAGCGACCAAGTTTTGGGCACTCCAAGAAAGTATGTCTTTGGGTTTCACTGGAGAGCTTGTTTTCACCCTTACCTTGCTCTTGTTCGAACAGTAGAGAATAGAAAACCTAACACTGATCGTTCTTCTTGTAAATTGGGGCTTTTAAGCTTTCAAGGTACAGAAGTATATGTTATAAAATGAGAGTAACATTTGTTTAGCTAGTGAATGTGACAATATTTTTTATGTATATAATGAGTCTAATGTAATTTTAATCAACTTGGTAATGATGTTATTAAAGGGCAAAACAAATGCAGTGTATTAGCAGCTGAGCACTGCATAGAAACTCCGACAAAATCCAAATACCACAAGACTCCCGACCCAGATCATGTGGAAGCTGAGAAATAAATGTATATAAAAATGTAGCTGGGGATGTGAACTCCAATTTTAAACCTTGATTCTGTGACTTGTAATAATCCAAGCTGTACAATTTAGTTTATGATAGCAGCATCAAAGCTGCTTCAAAATATATATATATCAACAGTGGTAAATACTGTAGATTTATATATATATATATGCAAAAAATATATACACACACTATTTTCTTATGTCATCTATGACATTTTTTATCTGTATACTTTTTTTGATGTGATTGTTTTTAACATGCTGAAGAAGTATATTTTGTTTGTGTCTTTTATGTGCTCTGTTCATATGGCATCTCTGATTTTTCTAAACCTTGTTCACTTCTAACTGAGTAGATATGACCCAGTATTTGCCTCCATGACTATATATATTGCAGTTCTGTGTTACATGCTTTACTAGCTTCCAGTAATTCTGTATTTAGAACCGTATCACCTGCCTTTATTTAATCAGCCATTTTTAATAGCTTACAAGTCTGTTAGTGTGTGAAATTCACTCAGTTGTGTCCAACTCGTTGCTACCCCCATGGACATATATAGTCATGGAATTCTCCAGGCCAGCATACTGGAGTGGGTAGCCTTTCCCTTCTCCAGGGGATCTTCCTAACCCAGGCAGGGATTGAACCAGGTCTCCCACATTGCAGGCGGATTCTTTACTAGCTGAGCCACAAGGGAAGCCCTTTTAATAGCAGTAAGGAATTATTTTCAGTTTTCCTCCATTGTGAAATGTAGCTGTTGGTTTTTCAAGTAGGAAAATTTAATTTGAAATTATTTTGCCACCATCCACTTTTACTCTTTCAAATTTATCTTTTAATAAAATATAAATAATGAAATGTTAAAAGATGGAATAATATTCATATAGGAGGTTAAGTATATTTATAAAAAATCTGGTAAGGATCTTCATTTTTTTCTCTAGATATATACGAGGTAAATATTTTACCACTGTTAAGTCTTTTCTTCATAGCAGTTTTGCTTAACACAGTAAGCACTTTGATATAGTTTATATATTTTTTTTAATAGTTTGAAAAATTAAACTAGACCTAGTGTCTCAAAGAGTTTTAAAACTTCAGCTCTTTCAGGTGCTTATGTTTCCAGGATGTTTAAAACAGAAGACAGCTTTGGGAGCCGACAGATGCCTATCCTGTCAAACCAGACATACAGGGGAGGAACAGAATGCATTTTCCTCCTGCCCTCTAGGTTCTCCATCCAGACCTCATAGATTGGGCAGATAAAGGACAGACAAGTAGGAGAAAAGCAGCCAGAAGGCCATTCGCACGTGTGTCCTGCCTTCACGGGATCCAGTGATGAGGTGCTCCAGGGGAGGGTTAGCTTGGGGTTTCTCCACCCAGCTTAGCTGGGGAAAGGGAGGGATGGGGAAGAAAGGGCACTTACGTAAAAGCAAATGACTTTCTAGAAAATAAATGGGCCTTCAGCAAAGCAGATAGGAGAAATGATCATGTGTCCTGGGGGCTGAGTGGGGTGCCAGAAGAGGAGATTATATATAAAGTTGCCTGGGGAGGGGATTTATGACAATTGCATTCTTTGGGAAGGCTCTGCTTTTAGGCAGGTAAAGGGTTTCAGGGACTCATAACTTCAGCTCAAAAATCGTTTGTACCCCCAAAGTGGCATGTTTTGGGGTGACAGGTCCTAAGCCTCTTCACCATCAGTGACAGAACGCTTCTCTAAAGAAGGAAAAGAGATTCAGTCTGGGACATCTCCAAAGAAGAAAAATAGATGTTTACAGGATGTGATGTGATTGTTTTAACTTTTTTTCATTTTAAGATCCTAAGTTTTATGTCACAGTGAGTGTCCCTGTATATTTGTAATCATTTCCAATCTTGGTCTCAGGGCTCGTTACACCATAAGCACAAAAGTGATGCCTAGTCAATATTTTGCTAAGATCTCTTTTCTTTTCTTTTTCTATGATTAGAGAAAAACACTCCAGGTCCACAAATAGGGCTTTATTCACACAGGATCTACAGCTTAATCTTCTGGAAATACTATTCTCAGTTATCTTTTACATTCACGCCTTTGTTTTCGGATGCTCTTGATTGTGGGTTATTTAAGATTGGTTTTGGCAGTTTGTTGTAATTGTCCTTTAATGGATTTTACATTTCATTTCTAATAGTAACATTAATACTTATCGATCAGACAGTTTTAATAAGTCAGACTTTACTTTTACAATGACGTAAGGTGTTGAGAACAGGACAAAGGATTCCATTTAACACTTGTGAATTGTACTCTCAGAAGGGTTTTCGGTTATAGATAAATCTAAGCATAACTGCCACCATTTTATCAGTAAGAATCCTGAAAAATAGAGGAAAAAATAACAGATTTCATAAGAGTGGATCTTGACCCCTGCTGCTCGTTAGGACTAACTGGGGAAATTTTTTTTTTAATCAAGTGTATATTACCACTGTGAGCTGTCTCAAAAATTCTTAACAGACCCCTTTCAGAGTTTCGAAACTGATTTCGGGTAAGTTAGGAACATTTCGACTGGAAAGATGAACATCCCCAGCCATCTCACAGTTCTGATGAACTGCTGGCAGTGGTGGGAAGTGGCAGTGACTTCAGCCCAAGGCCAGACCCTGTGCTTCCTCTCATCACCTCTTACAACAGTTCTTCCAAATAGATTGAGCCTTATGAGGATTTCCGTTTTCCTGGATAACTTCTGTCACTTTTCCTTAAGTGACCTGCTGAAAAGAGGCCCAAGCTGTCAGGAAGCCCATGGAGAAGCCGAGAAGGTGCTGCACACTGGTGTCCACCTGACCAGTCAGCATTTCATTGAGCCCCTACAGTGTACTAGTCGCCTTGGGACGGTGCTGGGTTCATACTTCGAGATAGGAGGTGTGTTTTATAGTCTGTGTCTCAGTTCAGTGTTGGCGATGGGACGTGTACAGGTGACCATTGTGGGCACAGAAAAGCCCAGTGCTGGAGGGTCTGGGAGGGACTGTGCGGGAGAGAGAGTAGACGGACTGAAGGGAGGGAGAGGGGCGTTTGTAGAGAAGGGATGCACGCAGCCTCGTGCCGTGTGTGGGGAAGTTCTCGCTTTGGCATGTGTGTCTGGGATGGGGTGGGAGAGTCTGCAAAGACCTGGCCTGGGGGCCTGTGTGCCCTGTGGAGGCGGATGTAGGGGTATAGGCCTGGGGGATGTTTGGATGGTTGCAACAAGTGTTATTTCTAAAAGGTGGTACGGATCCCAGCACCAGGGGAAAAATTACCAAGAAAAGGTAATGAACTTGAGAACTATTTACTAAGTAAAAATTGGCGAAACTTGATAATTGATTGAATGTAATCATAACAATTAAGGATAATAGCTAACATTACTGAATGCTCGCTGTGTGTCTGGCATTGTGCTCGGCATATTACCCGTATTAATTCTCCCAATAACTGAAGTGTATGACCTTAGTTCCCAGTTTACATATGAGAAAACTAAGGCTCAGGGAGTTGAAGTGACTTGGCCCAAGTTACACAGCTGCTAGGAAAAGAGACCCAGGCAGGACTTGAATCTGAGTCTAGAACTTCCATTCCCTCACTGACAATTTTAAGAAAGTAGTATTTACCTACCATAAAATTCACCCATTTAAGTATACACATCAGTGATTTTTTAGTAAATTTACAGAGTTATGCAGCCATCACAGCACACCAATCTTAGAGCATTTCCATTACCTCAAAAAGCTCTTTTCCCCATTTGCAGGATCCATTCCCACCCACAGCTTCAGGCAACTTAATCCACCGTCTTTCTGATTTGTCTTTTCTGGACCTTGAAATGGAATCAGACAATATGTGGGGTTTTTTGCATCTGACTTCTTTTTGCTTTTTGAGGTTCATCCATGGGTAGCAAGTGTCAGTATCCACTTTCTTCTTTATTGCTGACTAGGAGTCTGTTGTCTGGCTATCACACTTTGTCCCTCTAGTCACCAGTTGATAGGCATTTGGGTTATTTCCACTCGCTGCTCTGACCATTTGTGCCAAGTGTTTGGCCTTGTTTTCATTTTCTTTGGGTGTATATTTAGCCGCGCTGTTGCTCGCTTTTATGATAAACTTGTGTTTAACTTTTAAAGAAGCTGCCACACTCTTTTCCATCATATCTGTATCATTTACCTTCCCACCAGCAGTGTATGAGGGGTCTGATTTCTCCACGTCCTCGCCGATGCTTGTTCTGTATTTTTGGTTAAAGCCATTCTAGTGGGTGTGAAGTGATATCTCACTGTGACTTTGATTTGCATTTCTCAAATGGCTAATGATATTGAGCAGCTCTTCATGTTTTTATGACTCATTCGTGTGTATTCTTTGGTGAAATCACTATTGATATCTTTTGCTCACTTGTTTAATTGGGTTTTCTTATTTTTTTAAAGTAAGCATTCTTAGAATACTCTGGATACAATTCCTTTGTAAGACATAAGATCTGCAAATATTTTCTCCCAGTCTGTGACATGTCTTTTCAGTTTCTTAATGATGTCTTTTGAAGTATGAGTGTTTTTAATGAAGTCCAGTTTATTGTTTTTTTTCCTCCATGGATCATGCTTTTAATATTGTATCTCTCTGCCTAACCCAAGGTGACGAATGATTTTTCTCCCGTGTCTTATTTCAGAAGTTTTACAGTTTAGCTCTTACATTGAGATCTATGAGCCATGTCAAATTATTACTGTTATAAGGTGTGAGGGAAGGATCTAAGTTGATATGCATGTTCAATGGTCTCCGAACCAAGTTTAAAAGACAGTGCTTTCCAAAACTGAATTGCCTTAGTACCTCTATCAAGAAATCAATGAATCATATAAGTGTTTAAGTTTCGAAAACAAGAAGTGTACATCCTCCAACTTTGTTCTTTCTCAAGTTGTTTTGACTCTTCTGGTCCAGTGTTATGCTTCTTTTGTTAAAGTTATGCCTGTTGTATTTTTCTTGCACTTGTGACTAGAATTGTGTTCTTCAGAACCTGTATGCTCGCACACATCATTCTGTACTGCTGAGCGGAACAGAAGGCCAGAGGTTGATTTCTGCAGTTCCCTGATTGGGCCGTGGGAGGGACAGTGAGGCCACCATCTGATGAATCCGGGAGAAGGAGTGGGTTTAGGGCTGACGAGGAGACGGCTTCTGTTTGGACCCATAGAATCTGAACAGTGGGGTACGGACACATCGAGCAGATGGGCAGCTGGTGATTGTGGAGAGATTTGGACTTGCTGGCACGTAGGGGTCAAGTCATAGGAGAGCACCTGCCTGGGGAGGAGATGAGCTGAGGAGGGGAGCGTGAAGGACTCGGAGGGACCGGCCTGGACTGGGGTTCCACGGCACACAGGCCCGGTGATTAAGGACGGAGCTTCTGCATCAGACTGAGTCGAGTTTGAAGTCGGCGCCCGAGGCATCCACTGGCCTCCGTCCTGGGGAAGGAGGAGCAGGACCATAGCATCTGTGCCCTTCTCTGGGGTATGCAGGCTGCAGTGCTCGTTTCCTGGAGTTGTGAGGATTCAACAAGCTGATTGGTGCATGGTTTCCAGGAAGGCATCACCACGCAGTAGTAAGGAGGAAGGTTACCTGTCCTCCCAGCCCCCGCAGAGCTGGGCGTTAGTGACCAGGAGGGCCGCAGCCCTGATTACATGGAGCTGAGAGTCTCACGAGCAACACAGCGGCACACGTGTCATGAC EMBV3_23059 AGAAGCAGAATTAGAGCAGTTGAAAAAGCCACGACAGCCCAACCCTGACTGGCGTTACTC Gene GeneID:523226|PCDHA13:NM_001102506:247_cdna UTR3_Alt 2 NULL GeneID:523226 7 GENE PCDHA13 MGC165970 protocadherin alpha 13 EMBV3_22139 GCTCAAGGAAACCTTTCTAATCCAGATGTCCAAGCTGCCAAGAACAAGCTGAAAGCTGGG Gene GeneID:282394|UQCRC2:NM_174630:294_cdna Constitutive 0 NULL GeneID:282394 25 GENE UQCRC2 NULL ubiquinol-cytochrome c reductase core protein II EMBV3_13160 AACCTGTTCCACTGCCTGCACAGGGATTCAGGGAAAGTTGACACGTACATCAAGATCCTG Gene GeneID:519859|PRP9:NM_001038132:98_cdna Constitutive 0 NULL GeneID:519859 23 GENE PRP9 NULL prolactin-related protein IX EMBV3_10632 ACCACTAGGTGTCGCTGTTCCTCCAGTAGTTTGCGATTGGGCTTTCTCTAGGTTCAGCAA Gene GeneID:613472|GDAP1:NM_001101222:67_cdna UTR3_Alt 2 NULL GeneID:613472 14 GENE GDAP1 NULL ganglioside-induced differentiation-associated protein 1 EMBV3_13798 CACCATCCCCACTGGAAACAAGAGAGGTAACGGGATAGGATTTGAGCAGAAACGATAGAG Gene BVV0102_157507 + 0 NULL GK000019.2:40567374-40591894 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09835 CAATTGGCTTCGCCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTAGAGGGGATTCCG Gene GeneID:513830|CBX6:NM_001103094:55_cdna Constitutive 0 NULL GeneID:513830 5 GENE CBX6 MGC143414 chromobox homolog 6 EMBV3_33764 GTTGAAGCTCAAGAGGTGGCTCTGCCACGAGGAGCTGCTGTTCAACAAGGAGAAGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13866 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:615576|LOC615576:XM_002687524:480_cdna Constitutive 0 NULL GeneID:615576 5 GENE LOC615576 NULL similar to histone cluster 1, H2bd EMBV3_26326 GTTCCCCGGGGGAGCGGGTGGCGGACACGGTGGATGCTCGATTTCCTCTGCGTTTCGCTT Variant GeneID:519474|TERF1:NM_001076865:31_cdna 134^255 5 EMBV3_41232 GeneID:519474 14 GENE TERF1 NULL telomeric repeat binding factor (NIMA-interacting) 1 EMBV3_19164 CTGCGTTCCGTGCGCTGCGCCCGCGGCAAGATATTCTCCCAGGAGTACATCAACCTCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08091 GTATCAATGACTGTCAGAAGCCCCTTCACCTTATCGTCTCATGTTGTTTAAATCGTCTCC Gene GeneID:509355|SYAP1:NM_001034348:6_cdna UTR3_Alt 3 NULL GeneID:509355 X GENE SYAP1 MGC127250 synapse associated protein 1, SAP47 homolog (Drosophila) EMBV3_32845 CCAAGCGTGCAGGAGATGGGCCATTCCTGAGGAGAGAATGTATGAGATCAAAAAGAACAA Gene GeneID:100139988|RHOQ:XM_002691305:421_cdna Constitutive 0 NULL GeneID:100139988 11 GENE RHOQ NULL ras homolog gene family, member Q EMBV3_22542 TGGCCAGACGAACCAACTCCACCTTCAATCAGGTTGTCCTCAAGAGATTGTTCATGAGCC Gene GeneID:509163|RPL18:NM_001015556:163_cdna Constitutive 3 NULL GeneID:509163 18 GENE RPL18 MGC129138 ribosomal protein L18 EMBV3_14222 CCTCCAGTCATGCTGAGCTAGAAGGGTAATGAAGGCCACTTTGGTGGTCTCTGATGGATT Gene BVT0102_201774 + 1 EMBV3_01336 GK000015.2:47395048-47410764 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14073 ATCCTAGAGGGTCACACGCGTCCCCAGAACCTGTACTCCCCGATCAGTTTTGCAGATTTT Gene BVV0101_069095 + 0 NULL GK000026.2:21763072-21823911 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150440 1 XLOC_091874 Coding TCONS_00150440 XLOC_091874 Coding Coding KAZALD1 26:21760439-21764931 j TSS112689 1717 1 TCONS_00150440_1 221 3 0.61834780672456 0.00106183118832173 0.000204831062121354 0.00013231449663704 4.35278687460753e-05 3.27409380910821e-06 6.2499511714352e-06 7.12655972260293e-05 0 0 3.35482010930964e-05 3.36214556935451e-254 0 0 1.09586159980108e-05 6.66390036595955e-43 2.95572914748107e-48 6.9193838102147e-26 0 4.50141589504177e-06 4.46454878456289e-05 0.00083098004666575 4.32188681914805e-05 0 0 8.07044680637082e-05 0 7.84859867287073e-05 0 0.000144191422433771 9.56082792252343e-06 XM_869707.4 KAZALD1 PREDICTED: Bos taurus Kazal-type serine peptidase inhibitor domain 1 (KAZALD1), mRNA. 0.0 1184 100.00 0.381479324403029 NM_030929.4 KAZALD1 Homo sapiens Kazal-type serine peptidase inhibitor domain 1 (KAZALD1), mRNA. 0.0 847 88.57 0.37798485730926 TCONS_00150440_1 sp|Q8BJ66|KAZD1_MOUSE KAZD1_MOUSE Kazal-type serine protease inhibitor domain-containing protein 1; 2e-124 360 90.26 0.877828054298643 2 coding 0 0 0 0 -0.0954989315042781 0.435354997341684 -0.0284929997862344 0.56275339255898 GCTCTCGGCTTCCAGCTAATCATGCCACAGCCGCCCGCCGCTGCCTTGGCGCTGCCCGTGCTGCTGCTGCTGTTACTGCTGGTGGTGCGGACGCCGCCTCCGACTGGCGCGCGGCCATCCCCAGGTCCTGATTACCTGCGGCGCGGCTGGCTGCGGCTGCTGGCGGAGGGCGAGGGCTGCGCTCCCTGCCGGCCAGAAGAGTGCGCCGCGCCGCGGGGCTGCCTGGCCGGCCGGGTGCGCGACGCGTGCGGCTGCTGTTGGGAATGCGCCAACCTCGAGGGCCAGCTCTGCGACCTGGACCCCAGCGCCCATTTCTACGGGCGCTGCGGCGAGCAGCTTGAGTGCCGGTTGGACGCAGGTGGCGACCTGAGTCGCGGAGAGGTGCCCGAGCCGTTGTGTGTCTGCCGCTCGCAGCGCCCGCTCTGCGGTTCCGACGGCCGCACCTACGCCCAGATTTGCCGCCTGCAGGAGGCGGCCCGTGCTCGGCCGGACGCCAACCTCACCGTGGCGCATCCTGGGCCCTGCGAAACGGCACCTCAGATCCTGTTGCACCCATATGATGTTTGGAATGTGACAGGGCAGGATGTGATCTTTGGCTGTGAAGTGTTTGCCTACCCCATGGCCTCCATAGAGTGGAGAAAGGACGGCTTGGACATGTATGAGCCACACCCTAGGACTTCCCTATGAATCCGCCCATTTTCCAGCTGAACTCAGACAAAGTCATGTAAAGTCTGTTTTCTCATCTGCCCTAACTGGCATGTCCTCTCTCTGGAGGTCCCTCACAGAGCTGTACTCTTTCGCTCCCGAAAGCTCTCTCCACCTTCTCCTTACCTAGCCAGGGACACTGCTGAGGCGCAGTGTTTATTGACTGCTTGAAGGAGAAAATGAAAGCTTAAGTTCTAGAGGCCAAGACCCTGTGTGTGGATGTCAAGGGCCTCCTACGCGCCTGGGCTCCGCCCGAAGCCTGGCGCCCACAACAGGAGAAGTCGTGGTTGGCTCGGTGTCTGAGCTTGTCCTCTGAGGCCCAACGCAGGGAGCCCGGCCTCTTGGGAGGGGTGTGGCCCAGACCCCAACCCAAGGGCTTGGCTGCACCTCCCGTGGAACCTCATTGCTGAGTCCTGGCTAGAGTCCGGCGTTTCCTGGAGCTGTGCTCAACTGCTCGAGCGGGTTGAATGCATTACTTGGGGCAAATTCTAAGTCGACAGCGAAATCAGGAATAGGGATGTGAGCGGTGTGGCGGCGATTGCGGGGAGGAGCAGCCCATTAAGAGTCTGGACCAGAAGGAGGTCTGCTCTGCGCTGGAAGAGGGGACAGGAGTCTGGGTCCCCGGAATCCGCCTGGGAATCAGCCCCTTATTTGTTCTTCGCCAAGACTCTGGGCCAGCTGGGCTCAAAGACGCCCCCTGGCGGGCCCATCAATCCTGCGCCCGCTTGGAGACCAGAGGCTCTACTAGATCCTAGAGGGTCACACGCGTCCCCAGAACCTGTACTCCCCGATCAGTTTTGCAGATTTTACAGGATGTTCAGGTGCAGTCTCCTTCTAGCCTCAGTTTTCCCCTCCGGCACTGCAGGTTCAGGGCCCACAACCTTGACTAGGAAGAACCCCTGCTGCCTCCCTCCCCCTCCAACCCCCTTCCCCTGCCTCTGCTCCAGCGGACCGGCTTTAATAACGTCGCTGGAAAGTGACATGCGATTTATTATTAAAGTAATGCGGGGAC EMBV3_07864 GGAAACCCTCAAGGCTCTAGCTAAACGCCAAAGCACTTCTCTGCTCAAATTGCATCAAAC Gene BVT0102_101226 + 0 NULL GK000013.2:48575453-48578686 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042879 TCONS_00045361 TCONS_00045363 TCONS_00042883 TCONS_00045362 TCONS_00042878 TCONS_00045364 TCONS_00042881 TCONS_00042880 2 XLOC_025789 XLOC_026421 Coding TCONS_00045362 XLOC_026421 Coding Coding LRRN4 13:48575588-48595342 j TSS33120 4990 3 TCONS_00045362_3 341 0.185971943887776 4 0.747582645674075 4.69797828921764e-10 3.87830853333805e-07 0.000126130423172462 6.15552656983682e-05 0.000445886997893186 0.000159253227726037 3.24994487671687e-56 2.56127780986303e-22 1.56691652927387e-11 9.03694245861536e-15 9.71411699901478e-07 8.00558611768888e-18 6.66140487149651e-05 0.000333418118565165 4.15133144805194e-55 3.64280758274174e-123 0 7.51041804846586e-18 9.32527498875514e-09 0.00019176249523825 0.000314504363765671 2.66427900800521e-95 9.93044536029711e-12 4.86769738658056e-91 0.000406624476746263 0.000373050844186978 4.09807282899183e-08 1.00867585674752e-63 7.82306896969857e-19 5.65372062774973e-05 XM_605741.6 LRRN4 PREDICTED: Bos taurus leucine rich repeat neuronal 4 (LRRN4), mRNA. 0.0 3285 99.89 0.366132264529058 NM_152611.4 LRRN4 Homo sapiens leucine rich repeat neuronal 4 (LRRN4), mRNA. 0.0 1009 74.57 0.306613226452906 TCONS_00045362_3 sp|Q8WUT4|LRRN4_HUMAN LRRN4_HUMAN Leucine-rich repeat neuronal protein 4; 1e-93 298 58.64 0.941348973607038 0 noncoding 0 0 0 0 0.0375676390780508 0.962659522517581 -0.014790357885152 0.809690003436893 GATGGGGGAGGCCTGAAAGGAGGTGCCATGCCTGGAAAGGGGCAGGGACCAGCCCAGGTCCAGAGTAGGAGGAGGAGACAGGCAGTGAGGGTGTTGGCTGAAGACCACAGTGTCTCAGTAGGGAAGGGGGGTTGTGGGAGCTGGGGTATCCGAGGCTCCCTGGTGGGTGGGGCCAGGGCCAGGGGCATCTGGGAAACAGACCTCCTGAAATTCAAAGTTGAGCTGCTAGCCACTGGCTCCTGGAATCTACAAGACAAAATTGAAGACTGCAGACAGGGGCACCCAGGGCTGCCACACTCCGAAAGGACAGCTTCTGGTTCGGTCGGGATGGATCAGAAACCTGCCACGGCTCACGTCGCTCTACCTGAGGAAGATGCCAAGGCTGAGGAGCCTAGAGGGGGACATTTTCAAGATGACCCCTGACCTGCAGCATTTGGATTGTCAACATTCGCCAGCACTTAGCTCTGTCCATACATATATCTTTCAAGACACGCCTCACCTACGAGTCCTTCATTTCCAGACTGCAACTTGAGTTCCTTCCATCCTTGGAACTTGCATTCCTCCCAGGTCCTGTCCATCAACCTCTTCGGCAACCCTCTCACTTGCAGTTGTGAGTTGTCCTGGCTCCTCATGGATGCAAAGAGGATTGTCCTAAGCAGGGCGGCAGACATTGTGTGCAAACCAGCTGCAGGATCCAGTGGTACCTTCTCAGCCCCTCTTTTGCTGTCCCAGCTACCAAGTGTGTGCCATTCGGATCAAAACACCACCCTCCTTGATTCCAACCCACCCTCCTCAGTCATCTCCACCCACACACCATCTGCTCAGGGTTCCTCCACCTTGCGGAGCACAACACCCTCCACCACACCTGCGGGAGGCCAACAGAGCGTCACCAGATTTCCCTCCCTCCCTGTGGATTCCCCTACACGAGCAGCCAGGCTGCGGTACAGCCTTGCCAAGGATGGGGCCACTCCCTCAACTACTGTCTCTCCAACAGGTTCAAGCAACTCTGGCGACCCACCTAAGTCTGTGAGCACAGCCTGGGCAGAGCACCAAGAATATGCTACCGGGCTTATCCTGGAGCCTAGTAGCTCAGCGGCCTCCATCCCATGGGCCAGCAGACACCCTGGTCTCTCCCCTGCCTCCCGGGACTCAGTGAGCCTGCCCCAGCCCGCCTGGGAGACTCGAGCCACCCTGCAGTCTCCCCACCCCCCTCCTTCCGAGGGCGGGATTCCTGTCCTGCTGCAGGACGACTCCAGGGAGGAGGAGGAGGAGGAGAGCGGAAAAGAGGAGGTAGGGGCGCCAGCCTGGGATGTACCCTGCGATTACCACCCCTGCAGGCACCTCCAGACACCGTGCGCAGAGCTTCAGCGGCGCTGGCGGTGCCGGTGCCCCGGCCTCAGCGGAGAAGACACCCTGCCAGAGCCTCCCAAGCTGCAGGCGGTGGCGGAGACCACCGACACGACGGCACTCGTGCGCTGGTGCGCCCCCAACTCAGTGGTGCGCGCCTACCAAATCCGCTACGCACCAGAGGCTGGCCAGGGAACCAGTCGGTGGTGGGGGACGTATGTGCCACCGCGCGCCAGCACGCCCTGCATGGGCTGTTACCGGCCACCGCCTACCGGGTGTGCGTCCTGGCGGCCAACGGCGCGGGGCTGAGCCAGCGCGGGGCGTGCGCCGCCTTCACCACCGGGCGCAGCCCGGTGTTCATCACAGCGGGGCTGGGCTCCGCTGGCGGCCTGCTGCTAGTCAGTACAGCGCTGCTGGCCACCGGTCTCTGCCGCCGGGGCCGGACGCCACGCACCCCGCCCTGCCACACGCAGCTGCTGGCCTACCGCAACCCCGCCTTCGGCCCTGTGCCCGAAGCCCCGCTCTCACAGGAAGCGGTTCACTGAGCGTCCACCGCCAGTGTGGAGGAGGCGGTCCTGGGGTCTGGAAAGACCCGTCTGCCTATTGCTTCCTCGAGGCTTGCGCTCCTTGGGCACATGTGGCACTGGCCGAGCTGGGATCCTCAGCCCCGGGAACCTCTTGCCTTCCCTTCTTGCTGCTTCTCTGTTCCCAGAAAAGTTACGGGTCACCTTGCCGGGCACCCTGTGTTGGTTTTTCCGCAGCCGGTGTCCCTCAGCACCCGATAGAATAGAATTGTGTCAGCCGTTATTGTCCTATTGGAAGCGACATCTTCAAGTCATTTCAGTAAAGTTCCCTCAAGGTCAAGCTCTGGCTAAGGTTCTCCAGCTAAGAGATCGACTCCAGCGGATTCTCTCCCCAACTCCCTGTTCCACACACCCTGACCGCCCCCCTCCCCCTGGACCCCTGCCAGTGGATTCTTAACCTGAGAACCAGTTATGGTCCCTGAAGCCTTCTGTTCATTTCAGGGTATGGCAGCAGGTGTACTTCTAGCTTTAAACTGCAGTCTTCCCAGAACATCTGTGAAACACAGGCAGGGGGAAGGCTGTCTTTTCAAACTTGGTTAGTGCATTTCACTTAAGACCAGGTGGGTAGAGGAACCATGAACTTTTTGAAGGAAGCATGTTCAAGAACTTTTCTGAGAGAAAAAATGAACAAAAGGAAACCCTCAAGGCTCTAGCTAAACGCCAAAGCACTTCTCTGCTCAAATTGCATCAAACTTTCTCTTATTTTACTTCTATACAAACTTAGGAAGGAAAGTGATTTTATTAAATTAAAATGGGGTCATAGTTCTAGATTTTAGTTTTCTACCTTATCATTTATGTAAGTTTCCTGTGGCAGCCGTTAACAGACTACCACAAACTTGGTTGCTTCAAACAACTTAAGTTTATTCTCTTACAGGTTAGGCCAGAAGTCCATAGTCAAGGTATCAACAAGGTTGGTTTCTTCTGGAGACTAAGGGAAAACTGTTCCATTCCTCCCCTCTGCCCTGGTGGGTGCGGGGAGGGGGGTCAAGTAGCCAGCAATACTTGGGTTCCTGAGCTTGCAGGTTCCTTATCCATGCCTCCTTGTCTTCTGACAGTGTCTAAATCCTGCCCCCCTCCTTTTTTTCCATTATCTTTTCTCCAGTCTTGAGATATAACTGATGTATAACATTAAGGTGTACCATGCAATGATTTGAGACTCCTATGTATTATTGAGAGATAATTATAATGAGGTTAGTGAATACATCTGCCACTTCATAGTTATCTTTGTGTACATGTGCAATAAGAACTTTTAAGATCTTAGCTACTTTCCAATATACAGTATGATTAACTGTAGTCATCATGAACTTTCTTATTCCATTTGACCACCTTCACCCATTCCCCATCCCACCTCCCACCACTAGGAACCAACAATCTAATTCTTGAATTGGTTTTGTTAGATTTTGCATGAGATCATGATGAATTTGTCTTTGTCTTATTTCAGTTAGTATAATGCCCTCAGGATCCATCCATTTTGTTCCAAATTGCAGGACTTCCCTCTTTTTATGGTTGAATAATATTCCATTATATATATATATTTTCTTTATCCACTCATCCATTGACATTTAGGTTATTTCCATGTCTTGATTACTGTAAATAACACTACAGTGAACATGGGGAGTGAAGGTATCTTGAGATAATGATCTTATTTCCTTTGGATATGTACCCAGAAGTCAAATTTCCCTCTTCTTGTAAGAACACTAGGCATTGGCTTAAGGCCCACCCAAATCCAGCACAACCATCCTAATTTTGATTACATATGCAAAGACCCTATACCCCAATAAAGTCACTTTCACAGGTACTGGGGGTTAGAACCTGAAAAATATCTTTCTGAGGCACAGTTCAACCCCAAACAGCATTTACTTCTAAGAAAAAAAAAATTAAATTTGATTCTCATGGTACCTTTTGTTTCTACAACATGCTGCAGCACAGAAACCATGCTGCAGAAATTAAGCATATCCAAGTTTATCGGGATAATGGAATTGTACTACATATTTCTAGATGTTTGAAGTTCTGAAAAAGCTTCCCAAAATTCTAAGGTGGGTCCCTAGTTTTATCACATATGTAGCCAAGAAAAATGGACTGATTTAAAAGATCTACCAGCTCCAAATTTAAAACTGCAAGGCAAAAGCCCAAAATGTGACTAATATAAAAGCCCTCAGGCATGTAATTAAATTATCCCAGTGCCTTTTTAAGTTTAATATCAAGATTGAATCTGTTATGTAGAGGCACCAAAATGAATGTCATGCTTGGAGTCTGTATGCATGACTCAAATATACCTAATACAATTCCAGTGTTTTATAAGCCAGCAGAATTTATTTTATAGCAATTCAGTATCCAAAAACCTACAGGTTCGGGGTTGGGGAGTATATTAAGAAGAATCAGATTAAGACTTGACTACTAAAGAGACTATGGATCCAACTATAAGTCACTCCAAATAGTACCAACGCTAGAGCCCAAGTGAGCATAACAAAAAACAAAATTCTAATTTCCCCCCTACTTTATTTCAAGTTCTCCCTTTTAAAAACATACTCATGTGCTCATACTTTGCTAGTACTGAGACATGTTCAGTGTGCCTCTTGGGTAGTCCAGCAATCTGACTTCCACTTCTCACTGCCACCCAGGCCATTAGGAGACATTAAAGGAGGTTCCAGAAGGGGAGAATGACTAGCTTCACACAGCCCTTCTCTCACCCACTTCCACTGGAGTCCATAGCAGTGTCCATGGCTGCAGGCTTCTGTACTTTTCAAGCCAGGGGTGACTCAGCAGCTAATCTGGGAACAAGGAAGCCAGGACCAGCAGACAACAAAGGACACACTGATCCAACAATGCCACAACCGAGAGGCATGGATTCTGCTTGTAACTCCTTATAATTTTTAACACAGCTTAACAGGCTACATTTAGATAACCTCACGGTATGAGGCTATATTACACTTGGGTTAGAACCTAGGACAATGAGCAACAACGGGCCTCCACTCTGAAGGGGAAGCAGCCAGCACTAGCCACACGTCTTCCTCTCCTTGTACCTTCCATTCTCTTAAACATAACAGTGTAGTGAGAAA EMBV3_05215 CATCCGCCCCCAAGTTGTTCAACCCCCTTCCCTCATTTATTTCTGTTAAGCTCTGTGAAT Gene BVT0102_338927 + 0 NULL GK000028.2:29061651-29065819 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159441 TCONS_00159438 TCONS_00159439 1 XLOC_097419 Coding TCONS_00159438 XLOC_097419 Coding Coding MCU 28:28867962-29062932 = TSS119477 3037 1 TCONS_00159438_2 351 8 0.984464196872323 0.00617988651185883 0.0041906074660129 0.00718657084242579 0.00424402347697589 0.00316130979525097 0.00268058506267587 0.00433970964494779 0.00246234726046768 0.00441755924041569 0.000660610336682975 0.000606466699204073 0.000354170791690076 4.99624492819775e-05 2.3860754662656e-08 0.000528802808215808 0.0130736707677894 0.00524177860431034 0.00669916046459157 0.0103432353582805 0.00974924913116676 0.00360876467820028 0.00318787985173208 0.00246210518316613 0.00297894384466732 0.0084392741396418 0.00774275688364623 0.00326652882378365 0.000168316328553313 3.81410770221272e-07 0.000883373240299142 NM_001206102.1 MCU Bos taurus mitochondrial calcium uniporter (MCU), mRNA. 0.0 3036 100.00 0.553836022390517 NM_138357.2 MCU Homo sapiens mitochondrial calcium uniporter (MCU), transcript 0.0 3719 87.88 0.981560750740863 TCONS_00159438_2 sp|Q8NE86|MCU_HUMAN MCU_HUMAN Calcium uniporter protein, mitochondrial; 0.0 717 98.58 0.997150997150997 1 coding 0 0 0 0 -0.0966292838185354 0.606769970228244 -0.011502845549961 0.80322261609739 GCCGGTGAGTGGCGGCCTTAGCTCCGCCCCGGCCGTCCGCTGCGCTGCCTGGGTCGGCGCCGTTTACAGTTGAGAGATGGCGGCCGCCGCAGGTAGATCGCTCCTGCTGCTCCTCTCCTCCCGGGGTGGCGGCGGCGGGGGCGCCGGCGGCTGCGGAGCGCTGACTGCGGGCTGCTTCCCTGCTCTGGGCGTCAGCCGCCACCGGCAGCAGCAGCACCACCGGACGGTACACCAGAGGCTCTCTTCTTGGCCTAATTTGGGAGTTGTTTATTGCAGTACTGTTGTGCCCTCTGATGATGTGACAGTGGTGTATCAAAATGGGTTACCTGTGATATCTGTGAGGCTACCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAACCTATCTCAGACTCTGTTGGTGTGTTTTTACGACAACTACAAGAAGAGGACCGGGGCATTGACAGAGTTGCAATCTATTCACCAGATGGCGTTCGAGTTGCTGCCTCAACAGGAATAGACCTCCTCCTCCTTGACGACTTTAAGCTGGTCATTAATGACTTAACGTATCATGTACGACCACCAAAGAGAGACCTCTTAAGCCATGAAAATGCAGCAACACTGAATGATGTAAAGACACTGGTCCAGCAGCTATACACAACGCTGTGCATCGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGAAAGATTAGAAGATCTCAAAGAACAGCTGGCGCCCCTGGAAAAGGTACGAATTGAAATCAGCAGAAAAGCTGAGAAGAGGACCACTTTGGTGCTATGGGGTGGACTTGCCTACATGGCCACACAGTTTGGCATTTTGGCCCGGCTTACCTGGTGGGAATATTCTTGGGACATCATGGAGCCAGTCACCTACTTCATCACTTATGGAAGTGCCATGGCAATGTATGCATATTTTGTAATGACACGCCAGGAATATGTTTATCCAGAAGCCAGAGACAGACAATACTTATTATTTTTCCATAAAGGAGCCAAAAAGTCACGTTTTGACCTAGAGAAATACAATCAACTCAAGGATGCAATTGCTCAGGCAGAAATGGACCTGAAGAGACTGAGAGACCCATTACAAGTACATCTGCCCCTCCGACAAATTGGTGAAAAAGATTGATCTGCAAAGAGTCTCTGAGTCCCGGCAGAAAGAACACCTGTTTATAACTATGGCCTTTTTAATTAAAGCATTGCAGGTGGAAGCTGGGAGCCATGTTGGGGTAGAGGGTTTTTACCTTTAATTAAAAACAAAAACAAAAAGATCTTAGGGAAGAAAGTGTTAAAATCTGAAGATCACGCTTTGTGGAATATAGCTCAAAGGGCTTCGTGACATACTGTCTTAATCAAGCATCTCAGTTTCTGGATGAAAATGATACTCTATATAGTTGGGAGATTAGATTCACAAAGAAAAATTGATGCTGGGGGTGTTTGTCTCTTGCATCTTCTTTGCAGGGTCAGCAAAACAGTAACACACCAGCACCCCACTCAGCTCTAATTTTCTTTTTTTAATTTAACTTTTCTTAATTTTGACATAGGAGTAAATAAATCCACCAGAAAAGCAAAACCTCAAGATACGTGGGTGGCAAACAGAGTCTGAGCCCATGTCATTAGCTTTTATTTTAGACTGGACCCAGTCTCTGCAAAGTTACCAGGACTCTCTCCCATTTGTGCACATTTCTGACCACCCACACCTGTTGGTATGGTAGTTTTATCCATATGATAATTGGAACCAACTTATGACTGTTTGATAATTGACTCTTTGGATTATGCCTTCATACCTTCTTAAATGTCTATATATTTCAGTGCTCTGAATCACTATCTAGAAATCATTGGCAACACTGCATGAGGTTTCTTTTGTTTTGTTTTTTACTAAGTAATCTTTAAGAGGAAGACAAATTTCCCTCCTTTATTTAACTATCCCATTGATATTCCTCTCTCCCTCCACAGCTCAAGCCAGAGGGGGAATGTTTAGCTGTATTACTGAATCAGGAAGATGTAAGGTTTACAAATTGGCTAAAAATCATGGCTCTGTAGCCATTTCAGAACCCGAATAGTTTCATTGCTGTTAATCTGCTTGTATGACAGCATCCCAGGCCACCCAGATGGCCTTGCCTTGTATGGAGGCTTTGTTAGTCTCGAAGGATACACACTTCCATGCTGCTTGTGAACCCTCCCACCTCCACCACTTAAGCAGTTGTAAATCAAGTGAGTGGATCTCAAAGGGTGCAATTTATCTTTATATAGGAATACATTTCTATGGTTTCTTTCAACCTACCCTCTTCACCCTATTTTTTCTTATCTTAAATTGAGAGAAAGAGGAAATAATCTTATACTCTATCAAAATATTTTCTATCGTATTTCCAGATGACATCTGCACTTGGAGAGTCAAAGGAATCTGTGTCTGATCTGTTTTTATTAATAACGACTTGTGGGGGCAGGATGAAAGGATGATGGGGCTTGTCACACAGCTAGCTGATTCACTTTGTTCTTTCACATGATCCATCCCTCCTCCTTGTGGCAAGGGTTTTCTTTCTCTTTTTCTTCCTTCTTTGGGATCATTGTGTATGAAGAGAAACACTTTAAGTGACAAACCCAGACTCCAGGTGCCTTGCAGAGGTTGAAGGCCGGCCAGGATTGCTGCTGCTGCTCCTGCCACCACCCCTCCCTTGCACTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCCGTCCTCCTCCCACTTCCTTCCTCATCCGCCCCCAAGTTGTTCAACCCCCTTCCCTCATTTATTTCTGTTAAGCTCTGTGAATTATTTTTAAACCATTTATCCTGTTTGTACTGCAGGGGTTTTAAGAAGAAACAGCACAGTGCAATGAGCAAATCCTTTCAGGTTGTGTGGGAGGCTAGGGAGGGGAGAACGTGAAGAAAAGTCCTTTAAACAAATAGCAAAATATTGAACATGTGTAAAATCCTGTATCATTTATGAAATATGTATAAAACGCAATGTACCTCTGGAACAATAAATACTTATTCAATTTTTGA EMBV3_23139 ACGGTTGATGGTCACCGTTTTCCTGCCGAGGAAGGCCCAGAAGAAAACAGTGCCTATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20468 CTGTGTTGTCGTCAGAACAACCAACAAAAATACCAGAAGCCAAAGGAGGTCCTGGTAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10277 TTAAGAACACACATGGGGCGGCAGAAGGGGCTATACCAGAAGCACCTTAGAGTGGGTTCA Gene BVT0102_172624 + 0 NULL GK000002.2:123401325-124734049 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04994 ACACCAAGTGTTGTGTGGATGGTGGGATTGCAGGTGTCATACAAGTGAGGGGTGTCTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28496 AGCCAAGGAGAAGAGACCCCTGAGGCAGAGAAGTGGACTTAAGGCAGGGGATGAGGAGGA Gene BVT0102_201234 + 1 EMBV3_15226 GK000003.2:9372445-9385091 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27995 AAAGTCTTACCCAGGGCGCTCAAGACCTTGGAGACCCACCCCGTTCCATGGAGATTCCTC Gene GeneID:613757|GORASP1:NM_001046518:211_cdna Constitutive 0 NULL GeneID:613757 22 GENE GORASP1 MGC134531 golgi reassembly stacking protein 1, 65kDa EMBV3_20698 CCAAGCCCTTGCTCTGGTGAAATATGACTCCCCATGCACCTACATTCAGCTACTTCAAGC Gene GeneID:100296605|LOC100296605:XM_002697038:487_cdna Constitutive 0 NULL GeneID:100296605 22 GENE LOC100296605 NULL similar to slit homolog 3 EMBV3_30056 GAACCCAGAGAGTGACGGTTGGTCCCCAGTTCTATTTTGGAGGATGGACACTATCAAATC Gene GeneID:615223|BTN3A2:XM_002697365:360_cdna Constitutive 1 NULL GeneID:615223 23 GENE BTN3A2 NULL butyrophilin, subfamily 3, member A2 EMBV3_16313 GTAAGGACCTCGATTATTTTGTGGTGTCTGTGGAGTTCGCCGTGGCTTGGTTCAACAGTG Gene GeneID:515992|MGC133636:NM_001038122:32_cdna Constitutive 0 NULL GeneID:515992 13 GENE MGC133636 NULL cystatin SC EMBV3_11315 GAGTGGAGAAAGCATCAGCTTAGAGAACTCAGAGAAGGGACAGTAGATGAGAAGGGGCTG Gene BVV0102_185264 + 0 NULL GK000004.2:93043888-93220888 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182325 1 XLOC_110832 NonCoding TCONS_00182325 XLOC_110832 NonCoding NonCoding - 4:93200336-93201540 - TSS136267 1204 2 TCONS_00182325_1 57 0.81063122923588 1 0 0 2.31554296803505e-21 0 0 1.76709980476683e-10 9.43041482114913e-07 0 0 0 0 0 0 0 0 0 0.00107489216482556 0.000248206718885692 0.000270914711361283 0 0 0 0.000215717185404074 0 1.3924102330883e-05 0 0 0 0 8.06387011306774e-06 0 0 noncoding 0 0 0 0 0.0800070121410351 0.467933464509449 0.0436933874341595 0.482956025186267 GCTGGAGGTCTGAAACAGTCATATAGAAGAGTGGAGAAAGCATCAGCTTAGAGAACTCAGAGAAGGGACAGTAGATGAGAAGGGGCTGATGTACTCCTGAGAACCCCTGAGAACTGGTCCCCACAGGGCCGGGCATGGCAGAAGGCAAGAATGAGATCTGATGCCAGAGTAGGGAGATTATTTGAACGTCTGCTTATGTAACTGTCAACCCATACCACCAGATTACCAGGTCTCCAGCCCTCACTCACGTGATTGGAGGTTTCTTCTAGGAAAACTGAGTGGCCCCAGAAACAGGCATGTGAAGATCCCCAGAGAACAACCAGCTCCTGCTGAGAACCCAAGAGCCAAACTCAGCTACTGAGGAAACCCCCAACACACACAGAACTCCCAAATGACATTTCAGTGTCTTATTTTTCAATATATGAATCGACACAGCCAAAGATAACTCACCCACCAAGGACAGTCTCCACCATAATGAGACTGAGGGAAACACGGAGAAAGAAGACCCCTGAGGAAATGGAAATAACCGAAGAACAGAAAAGAATTCAAACAAAACGAGCACAGCCTCTAATTAATGTCCACAGAGACAGTACCAAAAGGGAAAACTCAGAGGACAAGAAAGTGCTCTTGGAAATGAAAACATTTTAAGAATGGCTGCCAAAATAATATATTCAGTTAAATTAAAGATAAAATTACGGAAATTTCCTCGAAAGCAGAAGATGAAGATTCAGTAGCATTCAAAGATGAAGTTGAGGAAATAACCCAGAAAGCAGAATAGCAGGATAGATGAAAAAGAAAATAGAAATGAAAAGAGAATCCATTTGGTAGGTTCACATGGGACTAATAGGAGTTCCAGAAAGAGAGAACAAAGAACTCTGAGGGGAAGAAACTATCAAATCAATAACACAAGAAAATTACCAACCCTGAAGTTTAGAGGTCTTTATAAAGAATAAAATCAGCAGTGTATGTCAACCTAAAATTTCAGTGTATCAGGAACAAAGAAAATAACCCAAAAATGTTCAGAGAGAAAATATAAAAGCCCATGAACATTACAGAGGCAAGAGAATTCTTTTTTTTTTTTTCTTCAAGAGACTCCAAAATACAGAGGAACCAGAACTTCAAAATTCAGAGGGAAGGTAATTTCAACCCAGAATTCAACACATGACAAATTATTATCTTCTAGCACAGAATAAAGACATTTTAA TCONS_00182322 s 3' 11009 TCONS_00182322 s 3' 11009 EMBV3_36927 GATTCAAGACCATATCTGGCATGTCTGAGCAGCAAGGAAGCCAGAGTGGCTCATACAGAG Gene BVT0101_020116 + 0 NULL GK000002.2:978168-996055 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26495 GGTGCTCCTTCAGGTAAAGTGTCTTCAGTTAGCAGCTCTTCGGGAAACAAACTTCAGACC Gene GeneID:100337279|LOC100337279:XM_002692738:221_cdna Constitutive 1 NULL GeneID:100337279 14 GENE LOC100337279 NULL hypothetical protein LOC100337279 EMBV3_22536 TGCATCGCTACTTGACTTCCATGAGACAGAAGATGCAAAGCACAGATCAGGCCACTGTGG Gene GeneID:282100|TRPC1:NM_174476:12_cdna Constitutive 3 NULL GeneID:282100 1 GENE TRPC1 NULL transient receptor potential cation channel, subfamily C, member 1 EMBV3_06573 TCTTTGAAATCAAGAAGCCCCCAGCTTCAGGGTGGAGTTCACAGTGGGAGACAAGCCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41973 TCTTGGGGAAAACCTCAGAGCTGGTTTATTTGGTGTCGTGGAACCTCTTACTGCTTTCAG Gene GeneID:785421|LOC785421:XM_002685994:344_cdna Constitutive 0 NULL GeneID:785421 3 GENE LOC785421 NULL similar to ADP-ribosylation factor 1 EMBV3_20884 CAGATTCAGAGGCCGCTACAGAAGTCCTTACAGACGACGTTCTCGAAGCAAAAGTCCGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20792 TAATGTAGGACTTGATGCTGCAGTTGTAGCCTTGTGCTCTTTTGGGCGTTGGACCTGCTG Gene BVT0102_033778 + 0 NULL GK000030.2:126168125-126240221 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248260 TCONS_00248257 TCONS_00248259 TCONS_00248256 TCONS_00248261 TCONS_00248258 TCONS_00248262 TCONS_00248255 1 XLOC_151551 Coding TCONS_00248261 XLOC_151551 Coding Coding EIF2S3 X:126234350-126255138 j TSS185722 6750 1 TCONS_00248261_3 406 0.401037037037037 12 0.675855101746284 0.00010002553292982 4.29024214261526e-05 0.000149017653869456 7.51600097021465e-05 0.000200120124257056 2.73367187197255e-05 3.86490096501542e-05 4.70358133163851e-05 2.78267092355243e-08 1.26748839942716e-05 4.44639183388636e-05 0.000139802356918092 6.15670777693805e-06 9.75109801929278e-10 0.000104893288491051 2.60268124667397e-06 0.000854839735271923 3.86842251275349e-36 1.08360933831096e-08 2.95777587361229e-05 4.2403005203757e-88 2.67141933158765e-05 4.12003501784238e-07 0.000501292459734079 2.40364137577644e-13 0.000222073579662993 5.91476651527466e-21 5.02305427667868e-32 2.47887561597725e-05 6.94533749715159e-09 NM_001046117.2 EIF2S3 Bos taurus eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa (EIF2S3), mRNA. 0.0 1454 100.00 0.119259259259259 NM_001415.3 EIF2S3 Homo sapiens eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa (EIF2S3), mRNA. 0.0 1150 92.17 0.117185185185185 TCONS_00248261_3 sp|Q2KHU8|IF2G_BOVIN IF2G_BOVIN Eukaryotic translation initiation factor 2 subunit 3; 0.0 752 82.42 0.997536945812808 2 coding 1 1 1 1 0.101851077125556 0.525586339269557 -0.0115206039487299 0.825488476020664 CAGGGACGCGGCCGACTTCCTTCCTCTCCGGGCAAGATGGCGGGGGGCGAGGCTGGTGTGACTTTAGGGCAGCCGCACCTTTCTCGGCAAGATCTCGCCACTTTGGATGTTTCCAAGTTGACGCCACTTTCACATGAAGTTATCAGCAGACAAGCCACAATTAATATAGGTACAATTGGTCACGTAGCTCATGGGAAATCTACAGTTGTAAAAGCTATTTCTGGAGTCCACACTGTCCGTTTCAAAAATGAACTGGAAAGAAATATTACAATCAAACTTGGCTATGCTAATGCTAAGATTTATAAACTTGATGACCCAAGTTGTCCTCGGCCAGAATGTTATAGATCCTGTGGAAGTAGCACACCTGATGAGTTTCCTACAGACATTCCAGGGACCAAAGGGAACTTCAAATTAGTCAGGCATGTTTCCTTTGTTGACTGTCCTGGCCATGATATTCTGATGGCTACTATGCTGAACGGTGCCGCAGTGATGGATGCCGCTCTTCTGTTGATAGCTGGTAATGAGTCTTGTCCTCAGCCTCAGACATCTGAACACTTGGCTGCTATAGAAATCATGAAACTGAAGCATATTTTGATTCTACAAAATAAAATTGATTTGGTAAAAGAAAGCCAGGCTAAAGAACAGTATGAACAGATCCTTGCATTTGTTCAAGGTACAGTAGCAGAAGGCGCTCCTATTATCCCAATTTCTGCTCAGCTAAAATACAATATTGAAGTTGTCTGTGAGTACATAGTAAAGAAAATTCCAGTACCCCCAAGAGACTTTACTTCAGAACCCAGACTTATTGAGCATAATGATCTTCAGTATGCTGCCCCAGGAGGTCTTATTGGAGTTGGAACAAAAATTGACCCCACTTTGTGCCGGGCTGACAGAATGGTGGGGCAAGTACTTGGTGCGGTTGGAGCTTTACCTGAGATCTTCACAGAATTGGAAATTTCCTATTTCCTGCTTAGAAGGCTTCTAGGTGTTCGCACTGAAGGAGACAAGAAAGCAGCGAAAGTACAAAAGCTGTCTAAGAATGAAGTGCTTATGGTGAATATAGGATCCCTGTCGACAGGAGGAAGAGTTAGTGCAGTCAAGGCTGATTTGGGTAAAATCGTCTTGACTAATCCTGTGTGCACAGAAGTAGGAGAAAAGATTGCACTTAGCCGAAGAGTTGAGAAACACTGGCGTTTAATTGGTTGGGGTCAAATAAGAAGAGGAGTGACAATCAAGCCGACAGTAGATGATGACTGAAGAATTAAATAACAGATCTGAATGAAGTTGGAATTTCTCTTAACAATCTAGGGGTATATTTTCAGAACAGTAGTGGGAAAATAATTTCACAGCTCATTACCTTAGTAGTAGCTGTAAGATTATTCTCATTTTTTGGTGATGAAAATTTAACCTCTAGTACTGAAATAGAGCCTACAATAAATATAGAAATTAGCATCATGTTGGATTGAATCTACATTTTACCAGAAATTAATCATTCCCAAATAATGTCTAATTTATACATCAGTGCAGATTTGAAAGGAAACTGTTTGCTACAACCAGACTTTGCTGTAGTAGACATACCACTGAATCTGTTTGAAATAAAGTCTTTGTTCTTATTTTTCATGATTCATCTTTGAGTAGCTCCAGGTTTGAAGGATTGTTGTAGCAGTAAAAACGTGCAAATTCTCAAAGACCAACTTCCCTTTCCCCATATTTTATGTTGCTTTATTTTTTAAAATTTTGAGTGAAAGTAGATTCAAATAAAATTATCCTTTCAGGCATGAGGACTTGTTTCCATGGACATGGCCTTTCTCTCCTTTCCCTGTCTGGACTAGAGTATAGGAAACTAGAGCCCAAAGTTTTCAGCTACTCCACCTGGTGCCCTACGATTGTCTCTGCATTGCTTTACGCCTGAAACCCTACAGCCTTCCCCCATTGGAAAGTATTGTAAACACCAGATGATTTTAGTTAAGTAGCAAAGATCTTTCCAGGCTTTATTTTACATTTTATCTTAATAGCCTAATTGATAAGATTATGATGTATATCCTAATATTAGTAATCTTTGGTAGTTTGAGGAGGTAGCAAAGGGTGAGCCCTTTGGGTTTTAACTTACTCTCCCTTTTTCTATACTTTTCCTGTGCTGTGCATTTTAATTTTTGCTTATTTTATCTTTCATAAAATTTTGTTGAAGCAGTGGTTCTTAACGGGCTGATACTAGAATTGTTGGAGAATCTTTATGTTTTGTTGGAAAGTGCTCCACTGAGATTCTGGTATTAATTGGCTTTGGATGGAGCCCAGGCGTTATTTTTTTAAAGCTCCCCTGTGTTGAAAAACAAATTTAGAGAGTTGAGGTTTATCAAATAACACAGACTCTTACTATGTTTGGGTAGTCTGATAATACTCTTTGGTTTACTTTTCTTAAATTTGCATTTAATGTAGGACTTGATGCTGCAGTTGTAGCCTTGTGCTCTTTTGGGCGTTGGACCTGCTGATATGTAGAAGTTTAAAAGCTCTGACTCTGGTTGTTAACGTAAGTTTGTAAGTTTTGAGGAAGCATATTAATGTTACGTAGTTGCTTGACTTTGAAAAGTTGCATTATAGCATGAGAAACACAGTTTAATGAAGCAAAATTTTAATTCAAACATTGATTTTATGTCTAACATAAGCACTTTCTACCTGAAATTCTGGAGTTGACTATTTTATTGTAATTAATCTCATGTCAGAACTATTTCAAACATGCACATGACTTTCAATAAATTTGCAAAGCACTGTACTTAACTGTAAATGGGAATACACAAATATGAAAACAACAGGCCGTATTTTCATAGAACCTGAAGCCCATACAGTGATTGTCAGCAAAAGTTGTACCTGGTTGAGAATCTGTCTATAGTGCGATGTTACTGATGAAAGTATACTGTATATGTGAATCTTCTTGTCTCTCCTGTTAAGATATTTTCACAATCTGACCAGTTCTCACCATCTTCACTGCTATTGTCCTACTCCCAGCCACCAGTGGCTCTCACCTAGAATAGCCCTGTAACAACTCCTGCCTTCCACACTTGTCCCACTGCAATCTGGGGGGTAACACAGCCAGAGTTACCCTTTTTGTAAGAGAATGCTATGTATTCGGTTGGCCAAAATATTCGTTTGGGTTTTTTCATAACATTGTACAGAAAACCCAAACGAAGTTTTTGGCCAACCCAGTAAAACTAATGAAGTGTAAAGTTCATCTCATGAAAATGGGGGACACGAGGACACTAGCTTTGACGTCATCCAAACAATTTCCAGGCTGACCTAGAAAGCTCGCTCTGCTATTTCACTCTTTGTTTGTAACCTCCAAAGATAATGTGTGTGTTTGTGTGTTTCTGATTTGGAGTGCAAATAGCTGCACTCATAAAACTCCTGAAATTGTGTTTCTAGGAAAATTTAACATGGCCGAGGAAAATGGATGCTTTTCTGGAAATATATAAAAGTTTTTCAAATTACCTGACACAAAGCAGATACCCTTAAAATACTGGTAATCAAGAAGCAAAGTTATTAAAAAATTACTTCTGCAGAAGTTTCCACAGACTCATACATTCTGCCAGATTTCAAGGAATAGAGTCTGGAACAAGTCAAAAATATCAGCTGCCACTTCAGTTCTTCAGTATTGTTCTCTGGGGCTTAGCAAATGAGATAGAAATATTGAGAATGGAAGCAACAGAATGTTACTTACAAGGTATAAGATTATCTACCTAGAAAATATAAACCAGAAACTGAAAAACTTGCACTGCTACAAGAGTTCAGTGAGGTGAGGTGACAGTTCAAAATAAACATGAAAAAAATGTTAATTTACTCAATAATTTACTAATTCATTTGCACCACACCTGTACACATACACACACAAATCAAAAAATGCAGTGGGTATAAACTTGCCAGGTATAAATTTAACAAGACTATGCAAGATACATATGAATAAAACTAACATTTCTTGAAGGACAAGAGAGGAGATAGGAGTAATGAGAACATAGACAATATTATTAGATGAGAATACTCAATATTGTACAGATGACTGCCTTTTTCCCCTCTATAAATTCGGTGCAGTATGAATAATAATAGGTTTTTAAAAAGAACTTGTCCAGTTGATATTAAAGATTTGGAAAAGTAAGATTCACAAGAATAGTAAATAAATGGGAATTTCCTGGCAGTCTAGTGATTAGGACTCTGGGCTCTCACTGCTGGGGACCTGGGTTCAGTCTCTGGTCTGGAAACTAAGATCCCACGAATTGTACAGCACAGTCACATAAGTAAAAATTGTAAGTGTCCTTCAGGGTGGTGGAATAATAAACTTCTGTAAAAGAATTATGACGGGAAAGTTGGTGTGTTTTAGAACATATAGTAAAGCTATAATATATGAAGTATGGTATTGAATAGATTTGTATGTGGTATTAAGTGAATAGATCATTGGAACAAAATTTACAACTAGATAAAAAGTTTTAACAATACATGCTATAGGCAGCATTTATGTCAGTGAGGAAAAGGATAGACTTTTAGTTCAAATTATTACCCATATGATGGTGAAAGATATTTAAAGTGTTATTTAAGATTTTATTTATTGGGCCAAAATTATAATGACAAAGATATCTTAGATTATTTTAATAGTTCAGATAAGGAATGCAAAACAAATCCAAAAGTCATATAGGAAAAGTTGGTAGATCTGATACATAAAAAGTTCAAAACTCAGCACCAAAAAGATTACAATTTAAAAGATGATAGAATAAGAAAAAGTAATTAAAGCTTACATGAAATGTGAAAGAATAATATTCCTTTGATGTTGTTCAGTCACTAAGTCCTGTCTGACTGCAACACTGGACTGCAGCATGCCTGGCTTCCCTGTCCTTCGCTATCTTCCGGAGTTTGCTCAAATTCATGTGCATGAGTCCATCTCAGCCTCTGCTGCCTGCTTCTTTTACTATCAGTCATTCACAGCATCAGGGTCTTTACATCAGGTGTCAGCTCTTTACATCAGGTGGCCAAAGTATTGGAGCTTCGGCTTCAGCATCAGTCCTTCCAGTGAATATTCAGGGTTGATTTCCTTTAGGATTGACTGATTTGATCTCCTTGCAGTCCAGGGGACTCTCAAGAGTCTTCTCCAACACCACAATTTGAAACCATCAGTTCTTTGGCACTCAGCTTTCTTTATGGTCCAATTCTCACATCTGTACATGACTACGGGAAAAACTAGTTTTGACCATACGGACCTTTGTTGGCAAAGTGATGTCTGCTTTTTAATATGCTGTCTAAGTTTGTTGCTTTTTAATATGCTGTCTAAGTTTATCATAGCTTTCCTTCCAAAGAGCAAGCATCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGGCCAAGAAAATAAAAACTGTCACTGCTTCTACTTTTTCTCCTATTTGCCATGAAATGATGGGACTGGATGCCATGATCTTCATTTTTTGAATATTGAGGTTTAAGCCAACTTTTTCACTCTTTCATCCTCCTCAAGAGGCTCTTTAGTTCCTCTTCACTTCCTGCCATTAGGGTGGTGTCACCTGCCTATCTAAGATTGTTAATATTTCTCCCAGCAGTCTTGATTCCAGCTTGTGATTCCTCCAGCCTGGCATTTCGCATAATTAAACTCTCCATATAAGTTAAATAAACAAGGTGAAAATATACAGCCTTGTTGTACTTTTTTCCCAATTTTGGACCAGTCAGTTCCATGTAAGATTCTTCTGTTGCTTCTTGACCCCCATACAGGTTTCTCAGGAGACGGGTAAGGTGTTCTGATATTCCCATTTCTTCAACAATTTTCCACAGTTTGTTGTGATTCACACAGTCAAAGGCTTTTGGGTAGTCAGTGAAACAAGTAGATATTTTTCTGGAATTCCCTTGCTTTCTCTATGATCCAACAAATATTGGCAATTTGATCTCTGATTCCTCTGCCTTTTCTAAACCCAGCTTGTACATCTGGAAGTTCTCGGTTCGTGTACTGTTGAAACCTAGCTTGAAGGTTTTTGAGCATAGCCTTACCAGCATGTGAAATGAGGGCAGTTGTACAGTGATTTGAACATTCTTTGGCACTACCCTACTTTGGGATTGGAATGAAAAACTGACCTTTGCCAGTTCTGTGGCCACTGCTGAGTTCTCCAAATTTGCTGGCATGTTGAGTGCAACACTTTAACAGCATCATCTTTTCAGATTTGAAATAGCACAACTGGAATTCTGTCACCTCCACTAGCTTTGATTTTAGTAATGCTTCCAAAGGCCCACTTGACCTCACCCTACAGGTGAAGGGTTTTTTGGCTTTTTTGTATAGTTTTGTGTATTCTTGGCACCTCTTAATACCTTCTGCCTCTGTTAGGTCCTTACTGTTTCTGTGCTTTATCATGCCCATCCTTGCATGAAATGTTCCCTTGATATCTCCAATTTTCTTGAAGAGACCTCTAGTCTTTCCCATTCTATTGTTTTCCTCTACTACTTTGCATCATTCATTTAAGAAGACCTTCTTATCTCTCCTTGCTCTTCTCTGGAACTCGGCATTCAGTTGGGTGTATCTTTGCCTTTCTTCGTTGCTTTTCGCTTCTCTTCTTTCCTCAGATGTTTGTAAAGCCTCATCAGACAACCACTTGGTCTTCTTGCATTTCTTTTTCTTTGGGATGGATTTGGCCACTGCCCCCTGTACAATGTTATGAACCTCCATCCACAGTTGTTCAGGCACTCTGTCTCCCAGATC EMBV3_14254 ATCTCCTCCAGATCACCACCCAACTGGCAGATGTGTTTCTCGTCGTCGTCGTCCTCGGAA Gene GeneID:524768|JMJD2D:XM_002692958:79_cdna Constitutive 0 NULL GeneID:524768 15 GENE JMJD2D NULL jumonji domain containing 2D EMBV3_11123 CCCCTGGATACTGCTAAAGTCCGGCTACAGATGCTGGCATCGGGAGTCGCCTCCTGGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19676 GCTTCTTCTGTTCTGCAGTATGGTTATGAGGTATCCCAGGTATCGAGACAGAAGACAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04960 GGTGTGTGGTGGGATTCTGAATTTCTAACAAGTTCTGAGGCGATGCAGGTGTTGTCAGCC Gene BVT0102_027771 + 1 EMBV3_23485 GK000010.2:37095810-37115365 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34969 CCCTGGGCTCCATTGTTTACATTTGTGGTGTTGTCAGGGGCAGGAAACTAACTCCAGCTA Gene GeneID:535126|PGS1:NM_001046395:431_cdna UTR3_Alt 2 NULL GeneID:535126 19 GENE PGS1 MGC129082 phosphatidylglycerophosphate synthase 1 EMBV3_11731 GAACATGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACC Gene GeneID:407231|MEF2A:NM_001083638:14_cdna UTR3_Alt 2 NULL GeneID:407231 21 GENE MEF2A NULL myocyte enhancer factor 2A EMBV3_11377 CGCAGAGTATTGACTAGTGGTTGCCAAGACGGAGAGTGGTTGGAGAGAGTTGGATTGGGA Gene BVV0102_024001 + 1 EMBV3_01293 GK000011.2:98478916-98498170 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37754 CTTTGGACTTCTGTGGCCCCTGTGAAATAGATCACTTCTTCTGTGACCTCCCCCCTATTC Gene GeneID:784858|LOC784858:XM_002697444:40_cdna Constitutive 0 NULL GeneID:784858 23 GENE LOC784858 NULL similar to olfactory receptor Olfr120 EMBV3_41300 AGTCTTTTGGCTTCCAGCCCTTGAATGTGAAGTGTCGTTGGCATGTCTGGCAGTAGTCTC Gene BVV0102_068596 + 0 NULL GK000012.2:79022948-79189511 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035734 TCONS_00035737 TCONS_00035736 TCONS_00035735 TCONS_00035739 TCONS_00160492 2 XLOC_020988 XLOC_097672 Coding TCONS_00035739 XLOC_020988 Coding Coding - 12:79024160-79041257 - TSS26154 3501 1 TCONS_00035739_4 718 17 0.796209639681797 0.00073655943138865 0.000479727149303512 0.000758875757718962 0.000815349842767486 0.000668402271980109 0.00034875578451992 0.000568586566256382 1.81108404239985e-14 0.000572271606191599 0.00132626153291856 0.00339845417486074 0.001767387433131 0.000288564857928015 0.00108045488186106 0.000492135871385761 0.0694212300501173 0.0171618660996425 0.0510231166438926 0.000852289870359781 0.0016894580809112 0.000274837657144149 0.020106830809033 0.0233659579128094 0.0291253922873275 0.000920056630851438 0.00101715601970234 0.000535307982376019 0.00464513549590848 0.00257904392664679 0.00626437995200511 XM_605078.7 RANBP6 PREDICTED: Bos taurus RAN binding protein 6 (RANBP6), transcript 0.0 1999 80.26 0.624678663239075 NM_002271.4 IPO5 Homo sapiens importin 5 (IPO5), mRNA. 0.0 4305 87.67 0.986860896886604 TCONS_00035739_4 sp|O00410|IPO5_HUMAN IPO5_HUMAN Importin-5; 0.0 1491 99.03 0.998607242339833 4 coding 1 1 1 1 -1.04153714021295 0.0701852779592329 0.463916886125683 0.00385839673891443 GTGAACAGCAGTATGTGACACAGAAGATCCGTATCTTCACTGCCCATACTGACTGGAAGTACCGGCACGCGGGGCTCATGGCCTTGTCCGCCATTGGGGAAGGATGCCACCAGCAGATGGAGGGGATTCTCAACGAGATAGTAAATTTTGTTCTGCTTTTTCTTCAGGATCCTCATCCCAGGGTGAGGTATGCGGCCTGTAATGCTGTGGGACAGATGGCTACTGACTTTGCACCTGGTTTCCAGAAGAAGTTCCATGAGAAGGTGATTGCAGCACTGCTGCAGACCATGGAAGACCAGGGCAATCAGCGTGTCCAGGCCCACGCTGCCGCCGCTCTCATCAACTTCACAGAGGACTGTCCCAAGTCACTGCTTATTCCATACTTAGACAGCTTGGTGAAGCATCTGCATTCCATCATGGTCCTTAAACTTCAAGAGTTGATCCAGAAAGGCACCAAGTTAGTTTTGGAACAAGTTGTGACGTCTATTGCATCAGTTGCAGATACTGCAGAAGAAAAATTTGTCCCCTACTATGACTTATTCATGCCGTCACTGAAGCACATTGTCGAGAATGCAGTTCAAAAGGAACTCAGACTTCTCAGAGGAAAAACTATTGAGTGCATCAGCCTCATTGGTCTGGCTGTTGGGAAGGAAAAGTTCATGCAGGATGCCTCTGACGTGATGCAGCTGTTGCTGAAGACGCAAACAGACTTCAGTGACATGGAAGATGACGACCCTCAGATCTCTTACATGATCTCCGCATGGGCCAGGATGTGCAAAATCCTTGGGAAAGAATTTCAGCAGTACCTACCGGTGGTGATGGGGCCTTTAATGAAGACAGCTTCAATTAAGCCTGAAGTAGCCCTTCTAGATACTCAAGACATGGAGAACATGAGTGATGATGATGGTTGGGAATTTGTGAACCTTGGAGATCAGCAAAGTTTTGGTATTAAAACTGCAGGACTGGAAGAAAAATCAACTGCTTGTCAGATGCTGGTCTGTTATGCTAAGGAGTTAAAAGAAGGCTTTGTGGAGTATACTGAACAGGTTGTCAAACTCATGGTACCTCTACTGAAATTTTATTTCCACGATGGCGTTCGAGTGGCAGCAGCAGAATCCATGCCTCTTCTCCTGGAGTGTGCGAGGGTTCGTGGTCCTGAGTACCTCACACAGATGTGGCATTTTATGTGTGATGCGCTAATCAAGGCCATTGGCACAGAACCAGATTCAGATGTCCTCTCAGAAATAATGCATTCTTTTGCAAAGTGCATTGAAGTCATGGGAGATGGATGCCTTAATAATGAACACTTTGAAGAATTGGGTGGTATACTGAAAGCTAAACTTGAAGAACATTTTAAAAACCAAGAATTGCGGCAAGTTAAAAGACAAGATGAAGACTATGATGAGCAGGTGGAAGAATCACTACAAGATGAGGATGATAATGATGTTTATATTCTGACCAAAGTGTCAGACATTTTACATTCAATATTCAGTAGCTACAAGGAAAAAGTGTTACCATGGTTTGAACAGCTGCTTCCGTTAATTGTCAACCTAATTTGTCCACATAGACCGTGGCCAGACAGACAGTGGGGACTGTGCATCTTTGATGATGTCATAGAACACTGTAGTCCAGCCTCATTTAAATATGCAGAATATTTCTTAAGGCCAATGCTCCAATACGTATGTGACAGCAGCCCGGAAGTCAGGCAAGCAGCTGCATATGGCCTGGGAGTCATGGCACAGTATGGTGGCGATAACTACCGTCCTTTCTGCACAGAAGCACTTCCACTGCTGGTAAGAGTTATTCAGTCTGCTGATGCTAAGACCAAAGAAAACATCAATGCTACTGAGAACTGCATCTCAGCGGTGGGGAAAATGATGAAGTTCAAGCCTGACTGTGTGAACGTTGAAGAAGTCCTCCCACACTGGCTTTCTTGGCTTCCACTGCATGAGGATAAAGAAGAAGCTGTTCAGACTTTCAATTATCTTTGCGACCTCATTGAGAGTAATCACCCAATTGTCCTTGGCCCAAACAATACCAATCTGCCCAAAATATTCAGTATAATCGCAGAAGGAGAAATGCATGAGGCAATTAAACATGATGATCCTTGTGCCAAACGTCTGGCCAATGTAGTTCGCCAAGTACAGACTTCTGGAGGACTGTGGACTGAATGCATAGCGCAGCTCAGTCCCGAGCAGCAGGCAGCCATACAGGAGCTCCTGAACTCTGCCTGAAGGGCCTTACTACCACCACCAGATAACTAACTCCAAATAAACGTTTACCCTTTTGTTTAGGTTTCTTTGTTTTGTTTTTGAGCAAAAGAGAACGGTAGAGTTGTGTGTAGGCCATTCTTCTGCAAAGCCACAACAGCAGAACGAGAAGCCCTGGGCTTCAGGATGGTGTGTAAGTGGATTTCCCCCCACCCGACTACTGAGGAAGTCCCGTGAGCCCTGCAGTAACACTGAAGAGTATTTTTCTATTGGTGTGACCCACCCATGTGAAGGTGAAAGGGAAATAAAATTAATTTTCCTCACTAGATACAAGGAAACTTAAGACAAAACAGCTTTAATTAAGATCCGTTCCTCAGCATAGATGTGTGTTAAAACAAGTTGCTGTACACCTAGTGTTCATTCTCTTAATTGGAGTGTGAGCCTTTTTGTGGGGTAGAAAGAAGCCTTCAACCCAGCAAGCTCATAGATCCAAACATTGAAGAAAAGCTGAAGACAAAAACAACAAGCATGAAAATGTTATTTTACGTCACTCTCGATCCTTTTCCCTAAAAGGCTTATGCAGTGACTCAGTTTGGAAAGCTTTTTGGCTTCCAGCCCTTGAATGTGAAGTGTCGTTGGCATGTCTGGCAGTAGTCTCATTCACTCCTCAATAAACAACGTTGAAATACGAAAGAAGTTTGTGTAAAAATTTAGTACTGTCTGGCTTTGATTCATTTAATGTTTTTAATATAAGAGTAATATTTTTTAAATGGCTAACAATGGCTCTGAGTTTTGTTTCCCCCTGATATTTTCTTCGTGCAATTCAAAGTTAAAAGCATCTAGTTTTTACCATCTTCCACTTTAATTTAAGCTAAGTTATGATACACCTACGCCATTCACAATTGATGTGCAAACTTCAGTCGTTTTAAAGCTAGCATTGTTCTTGTTAGAAAAAAAGAATTTGGCTTAGTATTTTTATTGCAAATTGTAATTGCTATGGAGCCACACACAACTTTTAAACTTTTAATTTTATGATAAGTATTATGGCTAAAAGTATTTACTGATAAATTCAGTAAAATGTGTGAATGTTTTTTTCTTTATGTATTAACCTCATAGCAGTAAATGACTTGCTGTTGTTTCTTTAAGGAATTTTTCTAAGAGGTCTTACTAGATTTCTTTTGAAACTCAAGTGTTAACAATTTTATAGTTTGTACTGAATTTAACCGTGACACAAAAATGAATTTTATGCTTAGATCAGAATTTAAAATTAAAGGTTTTTTTCTTTAAATGA TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 TCONS_00035737 s 5' 0 TCONS_00035734 TCONS_00035735 TCONS_00035736 TCONS_00035737 s 5' 316 EMBV3_30004 GTGGACCTTGCTCACAAATACCACAGGCTGACCAAATGCCCCAAGCATCCTAAGCTTTTC Gene GeneID:100295202|CCDC79:XM_002694897:950_cdna Constitutive 0 NULL GeneID:100295202 18 GENE CCDC79 NULL coiled-coil domain containing 79 EMBV3_04323 CAACATGGGTCTTTTGTAAAGTTTATTTACTTGCAGGTATAACTGGCCATGTCCAGAACC Gene BVV0102_134800 + 0 NULL GK000030.2:38599574-38609348 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246751 TCONS_00246750 TCONS_00246749 TCONS_00246752 1 XLOC_151110 Coding TCONS_00246750 XLOC_151110 Coding Coding VBP1 X:38608050-38633977 j TSS184946 2156 1 TCONS_00246750_1 160 6 0.917071665509527 3.26739167242545e-31 1.36769018846306e-118 2.73774127330506e-05 1.5036618578188e-227 3.30864712537125e-149 0 5.70709565555374e-14 1.19068988486196e-05 0.000205540262374536 5.67652490802083e-05 1.87026344584292e-05 1.44944742219834e-05 1.96686498200521e-11 2.01536424882351e-05 1.76814403922143e-21 0.00131788278314928 0.000945566146592658 0.0020628317214755 3.59002309985736e-293 0 2.16777872693181e-09 0.000325658258056061 0.000346936847802078 0.000789449705498411 3.86470877080235e-44 1.47427285251058e-30 4.87415916086061e-110 0.000315088803161348 6.62192350847768e-05 0.000309359107805209 NM_001038516.2 VBP1 Bos taurus von Hippel-Lindau binding protein 1 (VBP1), mRNA. 0.0 1532 99.31 0.398886827458256 NM_003372.5 VBP1 Homo sapiens von Hippel-Lindau binding protein 1 (VBP1), mRNA. 0.0 1613 82.26 0.73469387755102 TCONS_00246750_1 sp|Q2TBX2|PFD3_BOVIN PFD3_BOVIN Prefoldin subunit 3; 1e-112 322 99.38 0.99375 1 coding 0 0 0 0 -0.574494930323264 0.0765354616306195 0.0362618647441796 0.656338873671881 ACAGGCCGCTCGCGAGGCACGTTAGTCGCGCGCTCGCTTCTCCAAAATGGCGGCCTCTAAGGACGGTTGTGGTGTGGGAGAAGTGGCCGCTGGGAACGGGAGGCGACTCCACCTGGGGATTCCTGAAGCGGTTTTTGTGATGTAGATTCCTTCATGAAACAGCCTGGGAATGAGACTGCAGATATTGTACTGAAGAAGCTGGATGAACAGTATCAGAAATATAAGTTTATGGAACTCAATCTTGCCCAAAAAAAAAGGAGGCTAAAAGGCCAGATTCCTGAAATTAAGCAGACTTTAGAAATTCTAAAATACATGCAGAAGAAAAAAGAGTCCACCAGTTCACTGGAGACCAGGTTCTTATTGGCAGACAACCTGTATTGCAAAGCTTCAGTTCCTCCTACCGATAAAGTGTGTCTGTGGTTGGGGGCGAACGTAATGCTTGAATATGATATTGATGAAGCTCAGGCGTTGTTGGAAAAGAATTTATTGACGGCCACAAAGAATCTTGATTCTCTTGAGGAAGACCTTGACTTTCTTCGAGATCAGTTTACTACCACGGAAGTCAATATGGCCAGAGTTTATAATTGGGATGTTAAGAGAAGAAACAAAGATGATTCTACCAAGAACAAAGCATAAAGATGGCAGTTAAAAATGTGGTTCAGTTTTCCAAACATGTTTATGCTTAAAAGTTGACATAACTTTAAAGGATTTTTAACAGCAAGAATAATTAAAACTTTAAAAACAGATAAGCACCACTTTATTTATTTATAAAAACAAAATTAGTTGCAAATATTTTATGAAACTTACAGTGTTGTTATTTTATTTTTTGCATTTCCAACAAAGTAAATGCTGCTTTCATCATTTTTGTTTGTTTGTCTGTTTTTCATAAGGAAGGTCTTAGCCAAAATGGCTAGAAACTGTGAGATATGTTACAGAAGCTGATTTCTGGACAGTTTAGCGCAGTTTACTTTTTCTGTATTGCCTGGTGTTACTCTCACTTGTGATATGGTTAAATGAGTTTAGAGGTAGAAAAAACAGTTGAAATATTTGAAAATTTGTTTTTCTTTAGTACACGTAGGGCTTTATGGTCCTCTGTTGTTATTTGTCCTTTGTAAATGGAGTTTCATGAATTACTGCTTAGCTAATAACTACGTAATGTTCTATACTTTTAAGGAAATGGAAATTTGCATTCCTAAATTGTAAGAGGGCTATTGAGACAACACTTTTTCTAACCCGATATAGGTACACAGAGCCTTTGCAATGCCAACATAAAGGAGATCTTGGCCAACATAAAATAACAAAATTACCTACTGAAAACTCTTGCCTGAGGTGATTTTGTACTTCTTGACAGTTCTCCAAAGCAGCAAGACAGGAATATTAAGATAAATATAAATCTGCAGTGGTTTAAGAGAGTTGTGAGATTTTTTATTCATGGTAAAACTTCATAAGAGTGGTAGAAAATCCCTGTGGAAAGCCATTGGTACAGTGGCTGGGTGATACAGAATTCTGGTAAAAACACAAATGTATTGTTCCATGTCCCTGTAGCAAAGAGTATACTTGTACAGTGTTTTGTACTGGTATTTCATGATACTAAAGCAGTGAAGTTAACAATTGTAGCACAGCACCTTTATCGTGTTATTCTTTCTAAAATCAACATGGGTCTTTTGTAAAGTTTATTTACTTGCACGTATAACTGGCCATGTCCAGAACCTTTTATGTTTGTAGAAACAACATAAGATCCCTTTGGAAGGAATATAGATAAGCAAACAATTCAGAAGTTAAATCTGAGAGATACCAAAGTTTCCTCTCAGGGTTTCTTTCATGAGTTTAAATTCCCATATTTTAGAATTTGAGCTTTGTAAACATCTTAATATATTTTTGTGTTACTTTTCCCCCAAACTTTATTATGGTAAGTATATTGGTATGAAATGTTCCTGTTAACAGGAATGATTTAGTCAGAAGATCTTCCTTTTGTCTTCCTTTAAGTCCATGAAAATCTAAATAGGAATTTTAGGTTTTCTAAGCACAACAAATATTACCTAAGTATGCAGTATGTGTCAGAGAGAGTATTAGGCTTTGTTAATTAAATAAAAGATATTTAAATCTTGCGTCTGCCAGACTATTTCTCTTGTAACAGTTTACATTTTCAGAATAAC EMBV3_15283 GCTCATAGAGCCCAGTTAGCAGGAGACATTGAGCTGCCTTATATGTGCAACAGTGAATGC Gene GeneID:539132|TMED3:NM_001081609:48_cdna Constitutive 0 NULL GeneID:539132 21 GENE TMED3 MGC148655 transmembrane emp24 protein transport domain containing 3 EMBV3_02198 TTCCCTGACCAGGGATCAAATCAGGGCCACCTGCATTGGGAACTCAGAATCTTAGTCACT Gene BVT0102_308500 + 0 NULL GK000005.2:56106472-56175806 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02255 CTCACAGAACAGGGTGGGGCGGGGGTGATGGCACTGATAAAGCCAATGACAGAATCTATT Gene GeneID:516941|NCKIPSD:XM_002697049:518_cdna Constitutive 0 NULL GeneID:516941 22 GENE NCKIPSD NULL NCK interacting protein with SH3 domain EMBV3_21219 GCCCTGAATGGCTTGGAAAATATCCTGAGGCTTGGAGAACAAGAAGCCAAAAGGAATGGC Gene GeneID:539679|KPNA1:NM_001081733:83_cdna UTR3_Alt 2 NULL GeneID:539679 1 GENE KPNA1 MGC152064 karyopherin alpha 1 (importin alpha 5) EMBV3_32622 CCAAACACTGTATTTAGCACTGTACTGGCTTACTGAATTCTGAGTCCCCAGAGCTATTAG Gene BVT0101_028293 - 0 NULL GK000004.2:98711748-98840893 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184991 TCONS_00184989 TCONS_00184990 1 XLOC_111475 Coding TCONS_00184991 XLOC_111475 Coding Coding SLC35B4 4:98834531-98876431 = TSS137623 7617 1 TCONS_00184991_3 331 0.0989891033215177 10 0.818444354280532 0.000702408791459315 0.000300380696809969 0.00051277858855415 0.000464306155803096 0.000180759075792258 5.0467245624052e-12 8.61332762548621e-08 0.000185825685747015 0.000445695915403011 9.17743191007382e-05 1.12756695039077e-05 8.91948147016868e-05 1.9751892515251e-12 0.000132144115801572 9.46646721430714e-10 0.0023907107072852 0.000281178108680202 0.00107921827761761 0.000440876449491714 0.000568128664554727 0.000332622246904337 0.000742389970267072 0.00112267467864208 0.0010682228078925 3.97807276892376e-05 0.000289389540963566 5.27884574488983e-05 0.000107431168742089 0.000126541486544285 0.000354222772928726 NM_001192941.1 SLC35B4 Bos taurus solute carrier family 35, member B4 (SLC35B4), mRNA. 0.0 1797 100.00 0.130628856505186 NM_032826.4 UDP-xylose/UDP-N-acetylglucosamine transporter Homo sapiens solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 0.0 1728 79.82 0.251411316791388 TCONS_00184991_3 sp|Q969S0|S35B4_HUMAN S35B4_HUMAN UDP-xylose and UDP-N-acetylglucosamine transporter; 0.0 649 93.96 0.996978851963746 2 coding 0 0 0 0 0.02150798043318 0.840780438392639 -0.00929247451485363 0.840940677652839 CTGGGAAGTGTAGTCTAGCCCGGACTCGGACGACCCCTCGTATGAATGGGGCTCCGGTTGACGGCGAACTACAGCTCCTTGACCGGCAGCGTTGGTGGCAGCCGCTGAGAAAAGGGAGACCGTCACGGACCCGGGAGAGCGGCGCTCCAGGACGGTGGTGATGTTCAGTGCCACGGCGAGGCGGTAGCCGGGCTTCCTGGGGTAGTGGTCTAGTTGGGCGCTTCCTCTGCGCTCTCGCTCCCCTTCCCCTGTCTTGGCCATGCGCCCGGCCTTCGCGGTGGGCCTGGTTTTCGCAGGCTGCTGCAGTAACGTGATCTTCCTAGAGCTCCTGGCCCGGAAACACCCAGGATGTGGGAACATTGTGACATTTGCACAGTTTTTATTTATCGCTGTGGAAGGCTTCCTCTTTGAGGCTGATTTGGGAAGGAAGCGTCCGGCTATCCCAATAAGGTACTACGCCGTAATGGTGACCATGTTCTTCACCGTCAGCGTGGTGAACAACTATGCCCTGAATCTCAACATTGCCATGCCCCTGCACATGATATTTAGATCTGGTTCTCTAATTGCCAACATGATTCTAGGAATTATCATTTTGAAAAAAAGATACAGTATCTTCAAATATACCTCCATTGCCCTGGTGTCTGTGGGGATATTTGTTTGCACTTTCATGTCAGCAAAGCAGGTGACTTCCCAGTCCAGCTCAACTGAGAATGATGGATTCCAGGCATTTGCGTGGTGGTTGCTAGGCATTGGGGCACTGACTTTCGCTCTTCTGATGTCCGCAAGGATGGGTATTTTCCAAGAGACTCTGTACAAACAATTCGGGAAACACTCCAAGGAGGCTTTATTTTATAATCATGCCCTTCCACTTCCTGGTTTCATCTTCTTGGCTTCTGACATTTATGACCATGCAGTTCTGTTCAATAATTCTGAACTGTATCAGGTTCCAGTCGTTGGTGTGACAGTGCCCATCATGTGGTTCTACCTCCTCATGAACGTCATCACTCAGTACGTGTGCATCCGGGGCGTCTTCATTCTCACCACAGAATGCGCCTCCCTCACCGTCACCCTCGTCGTGACGCTGCGCAAGTTCGTCAGCCTCATCTTTTCCATCTTGTACTTCCAGAACCCTTTCACCCTGTGGCACTGGCTGGGCACCTTATTTGTCTTCATTGGGACTCTCATGTACACAGAGGTGTGGAACAACCTGGGGGCCACCAAAGGCCAGCCTCAGAAGGAGGAGAAGAAGAACTGAGGCCGGCCTGCAGTAGAGAGACCAGAGGCTAATGGGCTGGGGCCTGGCCACCAATTCACCTTGGTTAATGCTGAATTACCAGCCGTGTACCAGGGAATCCTCAGAGGGAGGGACTTCTCAGATTTCTCATGGCTCTGCAGACCCACATTTGTGGACCCTGAGGAGAAGCCCCTCTACCCTGAAGTAGAGAAGAGAACAGTTCTCCACTATCGGGTAGCCCTGTTCATTTGTTATCTGTTTTGTTTACCAAACACTGTATTTAGCACTGTACTGGCTTACTGAATTCTGAGTCCCCAGAGCTATTAGTTTTATATCTATGGTCTCAGACAAGATTCTCCCTGTTCTGATGATTCTCTTCTGTAACAGCCATCCTCCTCCTGGGGCCTCGTCCCCTTACTCCATCACCCTGCCACCCTCGGCTGCACTTTTCAGTCTGACGCTCCAGGCACCCTCACCAGGAACAACTGAATGGCCGCGAGAACGGAGGTTCTGGAGATGGTGGGGCTGGGTTTTCTCCCCAAGGTTGGGAAAGAAGCGGGTGTCGCTGTGTGCCCTGGGGACACTGGGGCAAGACTGGTGGGGATCCTCTCCCACATTTTTCCTTTTTTCCCCCTCTATGCAACAGTTATGTGCTTTCATACCTTTTGCTTTCTGTACTTAGAACAAACTGCAGCAGTTCTCTGGCACAGTGTTAAAGAGAAGTTGTGTATGAATTGGGAAGGAGAGACTTTTACTCTGTCTTCTCTCAGTTGTCTGAGTCATTTAGCCTCAAGGTTAGATGGTGATGCCAGGAGGACACAGGAGAAACTGGCCAAGAGGGCACTCGGAGAGCCTCGGGCTCTCCCGCCTCTACACCCAGCCAGGCATTCAGGGCAGGTTCCACATGGAAGAGAGGTTAAGTCTTTGAAATGCTGCTTAATCAGGTTCATCTCTGCCTGGCAACTCTTTTCAGAGTTATGACCAGTCAGGCTAATGGGTAAACCAATATATTCAGTACGTGTGGGTGTGGTGTATCAGGCCAAACTACAACTGAAATAGGTTTTTCTTTTTTTAAACAAGGCGTCTTAATGTTCTTGCCCGGTTTGGGGGTGAGTGTGTTTTTTTATATGTAGAAACCTGCCCCCCCCCCCCCCGCCCTTTTGCTAATTGTTTCAAAGGTCTGGTTTCCTCCCATGGGATAATCTTGAGAAAGAACAACAGCGTTAGGGTGGTGTGTGTAGGGGGTGGGTATGCTCTTGTGTAGTTTGTGATCACTGGTGAGAGGAGAACATGAAAATCAGTGTTCTATTTCCTCATCCTTCAACAGCCCTGACCTGCATCGCCTCACCACGGATGTGCTTTGGGGGGGGGTCCATCAGACTTACCAGCCTGTCTCTTTTTGCACATAGAGGCCTCTCCTTCTGTGCTGGGCACAGATTGTGTTCTTAAATAGAGAAGTGGCTATCCAGGTCTCCTGGGCTCACCCAGGGTATGATGTGTTTATTCCACTATCAGGAGCTGTTCTCTGATGGGACCTAAGATGAGTGTCCTAGAAACCCTGGGTCACTTTGGGGGAAGTCAGTTAAGCTGCCTCGGGTTTTTTGTTACATACGGTATGGATACTGTTTCTCCATCTAAGTCCCAGGGTTTTCAGATTGATTTGTTGTTCTGGACATTGACATCTGTGCTGTGCCAGTGAGAGTCTATACTGAAAGATGCTGAATTAAGTGTGAATTTGTTCATGGCCTCAAAAGGTATTTAATTTCTTTGAACTGTGTAGAGTTTCTCAGACTGGTGGTGCTATAAATACCATGTATTAAATAGCCTCTTAAGAACAAAAGCTACTTTTCTTACTGTATAATAAAAGAACCTGTCCCCAGGGGCTGTTTGATTGCTACATGTCTGGAGTCTTGACAGGATAACTATAGAGCTTTATATGAAATAGTATAACTTTTTTTTTTTTATGTGGATGGGAAATATTACAATTTTTAGTAACTGAAACAGTGTTAATGTACACAGACAGCATTTAACTGGGTTCCTGAGGTTTTAGGTTTTGGCTTATGGAGCGTGTGTTTCTCAGTCTAAACACTTCTGCTGGTCTTATTCATAGGAGGAGCTTAGGGCACTCACTCAATGAAATGAGTGCATGTAAGAACATAATGCCCTGGGAATTGGTTTTTCTTTCCAGTAGTTGCATATAAGGAAATAAATCTAATAGATCCTAGTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTTCTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACGCTTACTCTTTGGAAGGAAAGGTATGACCAACCTAGATAGCATATTGAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGAGAGTTGGATTGTGAAGAAAGCTGAGCGCCCAAGAATTGATGCTTTTGAACTGTGATGTTGGAGAAGACTCTTTAGAGTCCCTTGGACTGTAAGGAGATCCAACCAGTCCATTTTGAAGGAGATCAGCCCTGGGACTTCTTTGGAAGGAATGATGCTAAAGCTGAAATTCCAGTACTTTGGCCACCTCATGCGAAGAGTGGACTCATTGGAAAAGACTCTGATACTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATTGCTGACTTGATGGACGTGAGTCAGGGTGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCATGGGGTCGCAAAGAGTCGTTCGCGATTGAACTGAACTGAAAAACAGTTTATTCCCCTCCTTGGTTAACTGTTTTTTCAATCCTGGTTGAACTTGATTTCAATCCCTGTTAAAAGGGCAAATAAACCATTTTATAGAGGATCTGGCTCATCTGTAACTGGAGAAGAAATGTCTGTTAAATGCCTCTCCTCTTTCTGTGGATCAAGACCATGTAATTTTGTGCCCCAGAGAGAGAGGGTATGGTTTGTTTACAAAAGAGATTGATGTTTAAGGCATCCAGAACTCTACCCTTAGAGCAAAGATCAAATGGCAAATGACTAGCTAGAAAACACAAGTTTTGTGTGTGTGAATGTACCTGTGAACTCACTTCATAGCTTGACCAGGGTCATAAATGAGGCAAAAGGAGAAAATTGGTGATATTTGAGTTATTGCATTTAATGTCTGCATATCCTTTACCACAGTTCCATTGTTGTATTATAAATGCTTTTTTATTTTGTTAGGAATTTATTTTTGATCTTTTACTTTCTTTTTCATCCAGCTGAAACCATTAATCCATTTAATAAGTTTCTGTCAAGTTCTGAAGTATTTGGACACAGTCTAGATAGTATTTGCCTTCTTTCTGCATAGTTACCCAAAATGAATACAGTACCTGAAATTTGGTCATTGCATCCTGTGAAGAAAAACACAGAAGCTGAGTTGATCTCTGCCAAGCTCACCAAACTCCTTCCATTCTTCTGGGAAGATTACCTGGTGTTTTGTAAGGATGATAATAGCTTGTGTCATTCCCTGAGCACCTTTCCTCCCTTCTGCATATTTTTTTTTTCACATCCTAACCCCTACCTCCAATTTCTTCAGCAGCCTCTGGTTACTCGCGTAGTTTTCTACTGAGCGACACGTATAATGTTGTATCTATTTATGCCTCTATTCTTTGGGGCCTCTAGGTGTCTTTTGTGGATTTTTATAGGATATACATATCTGTGTAGCATGTATTTGTTATACATGGTTTTAAGCACTGATACTAGGGGTGTGTATATATACAGATGCAAATATTGGGCAGAGCGAATGTATGTGTAGACGGGTAAGAACAAGAAGGGTCAAAGTACAAATGTTTATATACTGTTACAGCTCAAAGTGGGGTGGAGAATCCTGTCAGTCCTACCACATTCTTGTCTGTATTTGGGAAGCAGTAGTTTTCATCTTTTGCTCTTTTTACCCTACCTCTAGCTGACTTCCGTTGCAGTGCCAAATGTCTATGGTGAGGGGAGGTGGGCCGCATTAGGTCAGGAGTAATTATAAACCAGTGAATTAGTTCTGGGCTGGGGGACACACTTACTGGTGGGCTAGCACACAAGCCAATGTAGCAAAGACCTGAGCATCTCCACAAATGCACGGTGAAAGGCACCCTAACATGGAGATGGGAAATCAAGACCCTACATTTGCTGTGGTCTGTTTCTCTTTGGCTAGAACTATGAGCATTTTGGTCTCAATAGTTTTATCCTGAAAAATGTTCATGGAAGTTACCTATGAGAGTTCAGTCTTAGGGTGGAAGAACTGTCAATATAGATAAAATCCATTTTTATTAGATGTGTGACCTTTGGAAATGAATATAAACAGTAAAATTAATAATAAGCATTAGCATCCATGTGGTGTGTAGCAGGCTGGGCTGGGAGACACTATAGCTGTGTGTGCTCTCTGGCGCCTTCCTTACAGTGGGCACTGCAGAGGAGGGAGGGACCAGGATCTGACTTGCATCCCATGAATGCATAAATCCTCGCCAAGATCTCTTATTCCCTCGAGTTTCTGAGAAAGCTTCTAATGGTTCTTGATACCCCTTCCCACCCTTCATCAGTAGGTCAGCAAGAAAGCAAATAAGACAACATTCCTGAGATTCTAAGGAAGGGAGGGTGCACGCCAGGAGTTGTGCAGATGCTGCTTTCTGCTGTCCAGGTGCCAGTGGGAGGAGGGCAGAGCATTACATATTTAGCACCTTGCATCATTTGATGCTCAGCGCAAGCAGAGGCCCTCAGGGTACCATTAAAGATGCTTAAAAGTTTCTGAAGTAGGCTGCTTGGGGTGTCCCCAACATCTCCAAAGCTGGTATAGTGGGTTTGCATTGGCTGATGCCTTAAGCTCATTGTCTTTTGTCTCCTCAGAATCACGTGGAGATTTACCTACTTAAGTCACTCAGCGTTCTACCAAACGCCCTCAATTTCAATCAAGTAAGGCAAGCTGCAAGGGTACCAGAGATAGGTGGGTTGGGGGGAGGAAAGCTTGGTCTCCATTTGTAAGACTCATACTTTTTAAAGTAAACGTTGTAATGGTTCTTTGGCACATTGAATTACTTATAGCTTTTGAGATGTAAAGAAGACTCCCGTGAACCAGGAGAAGCAGTAATTATTCCCCGACGTGATAAAAGTGTTCTTTGTGTGTCACTTGCAATCACAAGTCATTTCTGTGCTAGTTGCTTTCATTCCAGAGAATGGCATCATCCTCCCCAAAAAGAGGATGATTTTTAAAGTAGGATTTTCTAACAGATTATGTGGCATGGGGCTGGGGAAGGATGATGGGGATTTGATTTATCCAGCCTCTGAGCTCTTCATTCATATTGTGATTTAAGAACAAAGATGGCGACGGAGGGTGGGGGGTGGTGGCTAGACAGTAGTAGAGTATGTAGAACAGCTAAGACATTAGTGAGTATCCAGATTTTGAGCTGTGTAAATATCAAATGTCAGCTTCCAGCCTTCTGAGTTATTTGAGCAGAGAGTTACGGAGAAAAGGGAGATTTTGTGAATAAAATGTTTTTGCCAAACAAACTGAATGAGTCTTTTTACCATGATTTCTTATAAAGAGCAAATTTCTGCCTTCTGAAACAACTCATCAGACACCTGGTTTTTAATCTTGAATTGTACAATCATTGTTTCTTAATAAAAGTGATAAATATCTTGCAGGTGTTTCCAATCACCATTACCTTTCAAGTGCTTGGGTGCCGTTTCAAAAGCTCCGCAGTGTTTGCCTTGTACAGTGGTGGGACATTTTACCACAGTCGTAAGCAACCTGTCTTCTGCTGCCTGGCAGCTGGGTCAATCACAAACCACTTCCCCGGCTACAGGTCAGTTTCCACTTCAGAAATTTAAAGAGTCTTGGCTTACTTTGGGAGGTTTTAGAGGTTCGTGGCAGTAAGTTTCTGTAGCAAATCTCTCAAAACCTCTTTGCCTTAATAGAAACACATTGATTTTTGTAACATTGCAATGGCCAGCTCTCTTCCTCTTCCATCTGTTACTTTTAAATGAATCTTAATGTGGAAGCAGCTTTCAAAGCAGTTTACTATACTCAGTCTTTTTTTTTCTTTTTTATTGCAGTATAGTTGATTTACAATAATACTGGTTTCAGTGTACAACCTGGTGACTCAAGTTTTATAGATTATACTCCATTTATAGTTATTATAAAATACTGGCTATATTCCCTGTGCTGTAAGCAATATCCTTGTAGCTTATTTATTTTACACATAGAATTCTGTATCTCTTCATCCCCTACCTCTATCACGCCCCTCCCTGCTTCCCTCTCCC EMBV3_40845 CCTGGAAGCAGAGGACTGGCATCAGAGACGTGGCATCCTGTGCTGCTCATGCTGAAGAAC Variant GeneID:514579|ALKBH3:NM_001037602:63_cdna 522^610 1 EMBV3_14685 GeneID:514579 15 GENE ALKBH3 MGC134125 alkB, alkylation repair homolog 3 (E. coli) EMBV3_02201 AATCAGAAGGGTCTGTGGGAAGAGGGTCTTGCAGTATTAAGTGGATCAGGTAGCCCCTGA Gene BVV0102_133845 - 1 EMBV3_22172 GK000030.2:56020524-56116155 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251167 1 XLOC_154110 NonCoding TCONS_00251167 XLOC_154110 NonCoding NonCoding - X:56645829-56646492 - TSS188388 663 1 TCONS_00251167_1 45 0.423831070889894 1 0 0 0 0 0 0 0 0 0 0 0 4.14331116975743e-06 0 0 0 0 0 0 0 0 0 0 0.00101852367629617 8.30231505982688e-05 0 0 0 0 0 0 0 0 noncoding GAATTCCTTTCATCACTGTGTCACAAGAGTGCCGTGATCCTTCTTCCCTATACCTAGGATGATCAGGATTTTCACTGCAACATAAACACAGGTAACAGAGTGGCACAACAGAAGACTGCTGGGCCCCCAAGCCAGAGAGGCAGAGAGGAGTGGACTAAAACCATCTTCTGCTATGGTGCTGCCACTTTGGATAGCATGGGAACCTTCTTCTTTTTTTTTTTTTTGTCTTCTCTGTCTGTACAGATTGCCTCCGAATATTTTAGATTTTGAGCACTGCAAATTTACAGCTTTGGATTTTATCTCCATTTAAGCATGAGTAGTCCAGACTTTCTGGGTGGTTATGGGGAAAGGTTCTGAGACCCAGTGACTCACCTCTTGGGTAGCCCAGAAAAGGAAGACATTGCAGGACAATGTAGGATACGTGGGGGTTGCATTCTGGAACAAAGTAAATCAGAAGGGTCTGTGGGAAGAGGGTTTTGCAGTATTAAGTGGCTGAGATAGCCCCTGATTCCTGAGCAAGATGTGATTGGTTTCTCTGAATAATTCTGCTGGCTGACAAGGAAACACTATTCAGGAGGAATATGCAGGAATGCATCTGGTGCATTCAATAAGGAGAGTCTGAAGAGGACACTATCTGGTGGAGCAGAGCGAGGAAAGAAACTT TCONS_00247031 TCONS_00247032 . 3' 149765 TCONS_00247031 TCONS_00247032 . 3' 150427 EMBV3_24657 GGATCTGAGGTTTAAGAACCGTAACTTCAGACCTCCAATGGCCGACCAGAGAATGGACAT Variant GeneID:530705|ARNTL:XM_002693049:332_cdna 301^425 1 EMBV3_10201 GeneID:530705 15 GENE ARNTL NULL aryl hydrocarbon receptor nuclear translocator-like EMBV3_07768 TCGTCATAGACTTCCATCTAATTCCTCTACAAAGCCACCAAGTGCTGCTAAGCCTACACC Gene GeneID:515517|LOC515517:XR_083894:244_cdna Constitutive 0 NULL GeneID:515517 17 PSEUDO LOC515517 NULL similar to La ribonucleoprotein domain family, member 2 EMBV3_11285 GCCAAAGGAAAGCCAGAACAGGTTTGGATGTTAGAGAAAGTCATGTGCTGTACTGTTGCC Gene GeneID:531907|EXOC5:XM_002690915:205_cdna UTR3_Alt 2 NULL GeneID:531907 10 GENE EXOC5 NULL exocyst complex component 5 EMBV3_05170 TTAAACAGGCCTTTATGAGAACTTTGCTCTGTCTTCTTTTGCCCGCAGGGCGCCTTCCAG Gene BVV0102_082609 - 1 EMBV3_24523 GK000017.2:74598157-74607592 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081966 1 XLOC_050843 NonCoding TCONS_00081966 XLOC_050843 NonCoding NonCoding - 17:74599972-74600142 - TSS61906 170 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000495126644753858 0 noncoding 0 0 0 0 0.0230555830347774 0.890449966247053 0.0086426797515875 0.87052362116587 TCCCCAGCACCTGCCACGCCTCCCCCCATAGGGCTGCCCTCTAAACTGCAGCTTCCGGAGGGAAAGTTTTGCTAAGAGGTCTCCTGGAAGGCGCCCTGCGGGCAAAAGAAGACAGAGCAAAGTTCTCATAAAGGCCTGTTTAAGAAGAACGACTCAAAGCTATGCTGACC TCONS_00078356 TCONS_00078359 TCONS_00078360 TCONS_00078361 TCONS_00078362 TCONS_00078363 TCONS_00078364 TCONS_00078365 TCONS_00078366 TCONS_00078367 TCONS_00078368 . 5' 1818 TCONS_00078356 TCONS_00078359 TCONS_00078360 TCONS_00078361 TCONS_00078362 TCONS_00078363 TCONS_00078364 TCONS_00078365 TCONS_00078366 TCONS_00078367 TCONS_00078368 . 5' 1818 EMBV3_03739 GACTCAGGAAGAAACTTTGAACTTCCCTCTTAACTGCCTAAAGGAATTTAAGATAGGAGC Gene BVV0102_144407 - 1 EMBV3_19812 GK000018.2:15219205-15282115 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09742 TCTTCCGTATACCTTCATGTCAGAGTAAGGGGGCTTGCTACGTTTATCCTCCAACTGTTG Gene GeneID:510077|MAL:NM_001075428:41_cdna Constitutive 0 NULL GeneID:510077 11 GENE MAL MGC128302 mal, T-cell differentiation protein EMBV3_40624 CACAACAATTTTTTTTACTTCTGCTGTGGACCCAATTATTACCAGAGAGCTAACGGAAAA Gene GeneID:613976|ODAM:NM_001080315:47_cdna Constitutive 0 NULL GeneID:613976 6 GENE ODAM NULL odontogenic, ameloblast asssociated EMBV3_14582 CTGAAGCCACCTAAGAAGCAAGCCAAGGAGACAGACGAGGAGGGTAAGGCATTCAAGCAT Gene GeneID:100296019|LOC100296019:XM_002699236:196_cdna Constitutive 0 NULL GeneID:100296019 29 GENE LOC100296019 NULL hypothetical protein LOC100296019 EMBV3_16643 TTGGGTGACAAGGTCAACTTCTTCCGCATGGTCATCTCAAACCCCGCAGCAACTCACCAA Gene GeneID:512459|GAD2:XM_002692096:299_cdna Constitutive 0 NULL GeneID:512459 13 GENE GAD2 NULL glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) EMBV3_36815 CAGATGAAGCCCTGAAAATCCTGGGGGGTGTTGGACTCTTCTTTAGCTTCACAGAGATCC Gene GeneID:510619|TSPAN31:NM_001037595:989_cdna Constitutive 1 NULL GeneID:510619 5 GENE TSPAN31 MGC133819 tetraspanin 31 EMBV3_19985 CATCTACAAGGTGCTGAAGCAAGTTCATCCAGATACGGGCATCTCTTCAAAGGCCATGAG Gene GeneID:618216|HIST1H2BA:XM_002697533:281_cdna Constitutive 0 NULL GeneID:618216 23 GENE HIST1H2BA NULL histone cluster 1, H2ba EMBV3_18440 CCTGCTGTCATGGAAGGAGAGTAGAAGCGACATTACACCTGATCCAACTTCTGGAGAGTC Gene GeneID:536009|TTC29:NM_001099073:16_cdna Constitutive 0 NULL GeneID:536009 17 GENE TTC29 MGC152376 MGC159406 tetratricopeptide repeat domain 29 EMBV3_34691 CTGAGCTCGTGTGACCCTCAGATCATTTTACAGCAATTAGAGGAGCATATGAATACTGGC Gene GeneID:506353|KNTC1:XM_002694570:618_cdna Constitutive 0 NULL GeneID:506353 17 GENE KNTC1 NULL kinetochore associated 1 EMBV3_14490 GCTCTCACCGTCATCCGTTCCCAGATTTTTCACCTTCCTAAACTGTAACTCTGTCCCCGT Gene BVV0102_273965 - 1 EMBV3_05665 GK000017.2:10828319-11479936 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36937 CCTGCTACAGGTCAAAGACAGACACAATGGGAACATCCTGTTGGATGCAGAAGGCCACAT Gene GeneID:613348|LOC613348:XR_083594:95_cdna Constitutive 0 NULL GeneID:613348 2 PSEUDO LOC613348 NULL similar to phosphatidylinositol 4-kinase, catalytic, beta (predicted) EMBV3_08920 TTACAGTCTCTGAGTTTCCTGTCCCGGCTGAGTCTCTGCTACCCTTGTTCAGTGCATATG Gene BVV0102_257007 + 0 NULL GK000023.2:10283742-10318660 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135956 1 XLOC_082176 NonCoding TCONS_00135956 XLOC_082176 NonCoding NonCoding - 23:10309550-10311349 - TSS101246 1799 2 TCONS_00135956_4 85 0.355197331851028 1 0 0 5.58557363063187e-06 0 0 0 4.77205990565209e-05 1.29666090589089e-05 0 0 3.65935886396242e-05 2.54495383157063e-06 0 0 0 5.18164553673917e-05 0.000234899924192122 0 8.36828537414817e-05 7.57352796928114e-05 0 0 2.47492311915534e-05 0 2.79565988842899e-05 0 0 0 6.407006445433e-05 3.77790118336772e-05 0 XM_005196579.1 LOC101902220 PREDICTED: Bos taurus uncharacterized LOC101902220 (LOC101902220), 0.0 1418 99.75 0.439132851584213 0 noncoding 0 0 0 0 -0.269078743278928 0.066883435951552 0.0236727563074865 0.614470314158139 GCGGACACTTCCAGCTTGGTCGGCTGGCGCAGTGGTTGGACAGCCTGAGAGGAGGTCTGCGGTGTGACTGCCCTTTGTTTCCCCAGAGGCGGGGCTCGGCCCAGAAATGCTGGGCTTGACTCCTGGGCTTGCAGTTTCTAAGCTATAGGCCTGCATGCGTGTTGACATCTGGAAAACGCGGCTGTGGTCGTGAACATGGAGCAGGCAAAAGCGGTAGTATTCTGGTGGGCGTCTGGTGGGCGCTGTGCCCTTTCTCTCAAGAGTTCTCCCCAGACTTTCTTCTTCCCTTCCCATCTGAGCCTCTTCCTCTTCCCTCTTCCCTCCCCTCGCCCCTTTCTAGGTTGATCTGACCTAAAGCCAGGTCATGTGACTTAAGGGTGTATGACTGATTTAAAGCCAGATCATATGACTTAAAAGGTATGACTTCGTTTCTTCCGATTTTTAAAAGAAATTGGGCGATTTTCATGGGCCCCTAAGAGTATGGAGGCCCTCGCACTGTGCCTGCGATGCTTCTCTCCAGAGCTCTTCATCACTTCCTGCCCCCAGCTGCGTGAGAGTGGAAGGTGCTCAGGGCTCATCAGGTCCAGCCTGATGGGTAAGAAAACCGAAGCAGAGGAGAGAAACGACTGTCTGAGGCCACGCCTTGACAATGACAAGGACTAAGCCAACCTCTGACCACCAGGTCCCAAAACAACACAAAAGAGAGAACTAGTTTTCGTGTTTGGGAAAAAAGAGATATGCATCATGCATTCCTTCATTTATTCCAGCTCCAGCCACGTGCCAGGCACCATGCTGCTGCTTGGGACAGGGCACAGAGTGAAGCTGGCAGGAGGGACCCCAGGAACCAATGACTGTCTCGTGACAGTCCCGACCAGCGACACAGACGAAAAGTGCGCTGTGCTACAAACAGAAGGCGGAGCAACAAAACCCAGCATGGGAGGAAGAAGAGGCATCCGTTCTTTATTCGGAGACCTAAGAAAGAAGAAGAAATGTCTGAATTGACCCAAAAATTTTTTAAGGGGAAAAAAAAGGCATAGAAGTGAGAGTTGGCCTTTGTGGACAAAACCACATAATCAGGATCTGATGGTACTAACCAAAGATTGACAAGTATCCCTGGAAAAGAAGAGGGAGCCATATGTGTGTGTGTGACATTAATTTAGTGGGAAAGGTTAGCTAATTTGAGGTGAGATAAAACCACAACTGGCTCTCTATCTGGAAAAATCTGTATTTGGACCCTCACCTCCCACCCGTCACAAAAATCAGTTCCAGATGGATTAAGGCCTAATGAACTGAACAATAAATAGCAACCCTAACAGAAGTGGAAATAGAAAACCATATGCACTGAACAAGGGTAGCAGAGACTCAGCCGGGACAGGAAACTCAGAGACTGTAATAAAAAGTGAAGCACATATTTGGCTGCATTAATTTTTATGTGTCAAAAGATACCATAAACAAAATGAAAAGAGGATGGATTTGGGGGAATTCCAAAATTCCCCGTTGCAATGCAGATGGCAGATGAAATGCCTGCAGGCTTCCCTGGGTGGCTCAGTGGTAAAGAGTCTGCCTGCCAACCCAGGGTTTGATCCCCGATTCCTGGGAAGATCCCGCATGCCGCGGGGCAACTAGGCCCATGTGCCACAGCTACTGAGCTTGTGCTCTGGAGCGGGGGGCCCGCAGCTACTGAGCGCACGTGCCACGACCACTGGAACCTGTGCTCCCTAGAGCCCGGACTCTGCAGCAAGAGAAGCCACTGCAATGAGAAGCCCATCTGCCGCAACTAGAGAGAAGGCCCAGCACGG TCONS_00134017 TCONS_00134018 . 3' 7312 TCONS_00134017 TCONS_00134018 . 3' 9110 EMBV3_33742 GAAGGAAAGAGCCACTCCTAAGCCATATACACTAATGATCCATCCCAAGGGGCAGCACAG Gene GeneID:100138732|LOC100138732:XM_002693717:424_cdna Constitutive 0 NULL GeneID:100138732 15 GENE LOC100138732 NULL hypothetical protein LOC100138732 EMBV3_26275 GGTGACACTCCCTCCCACCTGCCCCCATAAGCAGCAGCACATTTCAAAAGGATTATTAAG Gene GeneID:281052|CD36:NM_174010:2_cdna Constitutive 2 NULL GeneID:281052 4 GENE CD36 NULL CD36 molecule (thrombospondin receptor) EMBV3_08553 TGCTTCTTGCAAAACAACGCCAGATAGCAAGGATGAAGGCGGCTAGGAAGATCCAGGCCT Gene GeneID:783987|LOC783987:XM_002697024:449_cdna Constitutive 0 NULL GeneID:783987 22 GENE LOC783987 NULL similar to IQ motif containing F3 EMBV3_24112 GGGGATGCCCAGAGAAGGGGAAGTGGCCAGCTGGTGAAGAAGCTGAGTGACCTCACAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30170 GTTCAGCTTCTACGAGCAGCCGGACGTAGAGGGGCACACGTCCATCGTGGACCTAATCGA Gene GeneID:615146|SOCS6:XM_002697692:211_cdna Constitutive 0 NULL GeneID:615146 24 GENE SOCS6 NULL suppressor of cytokine signaling 6 EMBV3_24050 ACCGCAGAGTTCAAGGAGGCCTTCCAGCTGTTTGAGCACTTCCTACCCATGCTGCAGACT Variant GeneID:281341|MYL6:NM_175780:893_cdna 85^228 10 EMBV3_43343 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_20686 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40378 CCCAGCTCAACTTGACATTAAACAGAAAAATTTTCACTTATGATTGCACTGGCTGTTGGC Gene BVT0102_113056 + 0 NULL GK000022.2:48548479-48556151 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127002 TCONS_00127004 TCONS_00127001 TCONS_00127005 1 XLOC_077544 Coding TCONS_00127001 XLOC_077544 Coding Coding SFMBT1 22:48439204-48550291 j TSS95101 5199 1 TCONS_00127001_10 865 0.0115406809001731 22 0.953396467601678 0.000716813575680688 0.000800240546508126 0.0003052143999437 0.000218547617028552 0.000949804293103713 1.7157630844098e-05 0.000146585511363067 0.000727913243180051 0.000841432670976889 2.1978495512971e-08 3.08513976689643e-11 1.52124922566852e-11 0.000301326697596378 0.000333693708818915 0.000237839390165175 0.000704928784081449 2.88509862440083e-10 2.07256395006182e-09 0.0003226336714472 0.00131326707352617 0.000240492280540074 2.56346770870817e-06 0.00028171403905552 0.000431078260444786 0.000922022612670038 0.00137503017443246 1.12056456731554e-07 4.77804317872373e-05 1.68512769650755e-05 0.000178431458213695 XM_005222785.1 SFMBT1 PREDICTED: Bos taurus Scm-like with four mbt domains 1 (SFMBT1), 0.0 6327 100.00 0.674552798615118 XM_005265220.1 SFMBT1 PREDICTED: Homo sapiens Scm-like with four mbt domains 1 (SFMBT1), 0.0 5746 85.22 0.974802846701289 TCONS_00127001_10 sp|Q9UHJ3|SMBT1_HUMAN SMBT1_HUMAN Scm-like with four MBT domains protein 1; 0.0 1680 96.54 0.998843930635838 0 coding 0 0 0 0 -0.373585843882416 0.305618517076744 0.000722015665858153 0.98898521198412 GTGAATTTGACCGTCTGGCTATCTCATATAGGTGGAATTTTACAGTATCTGTCTTCTTGTATGATAATGACATTGTGACTATATATGAGAATGTCCTTTTTCTTGGGAGAATCAAACTGAAGAGTTAAAGCACTTTCACTTGGACCCTTCGATGCCCATTGAACAGATGCTTGAGAATTGCAAGTAATCTTCAGATTGTAGCATAACCATAAGGCCTGTCCTCTGTGTGGGGAGGAGCTTACCCATGTGCTGTGGAAATGAACGGGGAGCAGCAGACTGATGCAGATGCTGGATCTGGAGTGGAAGAAGTGGAGTTAAGCTGGGAAGACTATCTAGAAGAGACAGGGTCCACAGCAGTTCCCTACGGGTCTTTTAAACATGTGGACACACGTTTGCAAAATGGATTTGCTCCTGGGATGAAACTGGAGGTGGCTGTGAAAACTGACCCTGAAACCTACTGGGTTGCCACCATCATTACCACCTGTGAGCAGCTGCTCCTCCTCCGCTACGATGGCTACGGGGAGGATCGCAGAGCAGACTTCTGGTGTGACATTAGGAAAGCTGACCTCTATCCCATTGGGTGGTGTGAACAGAATAAAAAGACCCTCGAAGCCCCAGAAGGCATCAGAGATAAAGTGTCTGACTGGGATGAGTTTCTACGGCAGACCCTGACCGGAGCATGTAGTCCTCCTGTTCCACTGCTAGAGGGCCTCCGTAACGGGAGGAATCCTTTAGATCTCATTGCTCCAGGTTCCAGGCTGGAATGTCAAGCTTTCCAGGACTCTTTAAGTACTTGGATTGTTACTGTGGTAGACAACATTGGGGGAAGGCTGAAGCTGCGTTATGAAGGACTTGAGGGTTCTGATAATGTTGAGCATTGGTTGTATTACTTGGATCCGTTTCTTCATCACGTTGGTTGGGCTGCTCAACAAGGGTATGAGCTTCAACCCCCATCAGCCATCAGACATCTGAAAAATGAAGCTGAGTGGCAAGAGATCTTGGCCAAAGTCAAAGAGGAGGAAGAGCCATTACCATCTTATTTGTTTAAGGACAAGCGAGTGATCGGCACTCATTCATTCTCTGTAAATATGAAATTAGAAGCTGTGGACCCCTGGTCTCCTTTTGGCATCTCTCCTGCTACAGTTGTTAAGGTTTTTGATGAAAAGTATTTTCTGGTGGAAATGGATGATTTGCGACTGGAGAATCGTGGGCAGCGATCCTTCGTGTGTCACACCGACAGCCCTGGTATTTTCCCTGTGCAGTGGAGTCTGAAGAATGGTTTACACATCAGCCCCCCTCCTGGCTACCAGGGCCAGGACTTTGACTGGGCCGACTACCTCAAACAGTGTGGTGCTGAAGCTGCTCCCCAGAGGTGCTTCCCTCCGTCAATTTCTGAGCATGAATTTAAGGAGAACATGAAGCTTGAGGCAGTGAACCCTCTTCTCCCTGAAGAAGTGTGTGTTGCCACCATTACTGCAGTGAGAGGCTCCTACCTGTGGCTCCAGCTAGAGGGTTCTAAGAAGCCCATACCTGAATTTATTGTGAATGTGGAATCAATGGATATATTTCCTTTGGGCTGGTGTGAAACCAATGGCCATCCCCTTAGCACTCCTCGCCGAGCACGAGTACACAAACAGAGGAAAATTGCAGTGGTTCAACCAGAAAAACAAATACCATCCTCAAGGACTGTCCATGAGGGTCTGAAGAATCAGGAGCTGAGCTCCACAGACTCAGTTGTGATTAATGGAAAATATTGCTGTCCAAAGATATACTTCAACCACCGTTGCTTCTCAGGGCCATATCTTAACAAAGGAAGGATCGCTGAGCTGCCTCAGTGTGTGGGACCCGGGAACTGTGTCCTGGTCCTCAGAGAGGTCCTCACTTTACTGATCAATGCAGCCTATAAACCCAGCCGTGTCCTTCGGGAGCTGCAGCTGGACAAAGACTCTGTGTGGCATGGATGTGGGGAGGTCCTCAAGGCCAAATACAAAGGAAAGAGCTATCGAGCTACTGTCGAGATAGTGAAAACAGCAGATCGGGTGACTGAATTCTGCCGGCAAACCTGTATCAAACTGGAGTGCTGTCCTAACCTCTTCGGTCCACGAATGGTTCTGGATAAGTGTTCTGAGAACTGTTCTGTTCTTACAAAGACTAAGTATACACACTACTACGGAAAGAAGAAAAATAAAAGAATTGGGAGACCACCTGGTGGGCATAGTAACTTAGCATGTGCCCTGAAAAAAGCGAGTAAGAGGAGAAAGAGGCGAAAAAATGTTTTTGTTCATAAGAAGAAGCGCTCCTCTGCGTCTGTTGATAATACACCAGCAGGCTCTCCCCAGGGAAGTGGGGGTGAAGATGAGGAGGACCCAGATGAAGGGGATGACGATTCCCTAAGTGAAGGCAGTACATCTGAGCAGCAGGATGAGCTCCAGGAAGAGTCAGAAATGTCAGAAAAAAAATCATGCTCCTCCTCCCCCACCCAAAGTGAGATATCTACATCACTGCCTCCAGACAGACAGAGAAGAAAAAGAGAACTTCGCACTTTTTCATTTTCTGATGATGAGAATAAACCTCCTTCACCAAAGGAAATAAGGATTGAAGTTGCTGAAAGGCTTCACCTGGACAGTAACCCCCTGAAGTGGAGTGTGGCGGACGTTGTGCGGTTCATCCGATCCACAGACTGTGCTCCGTTAGCAAGAATATTCCTAGACCAGGAAATTGATGGGCAGGCCCTATTGCTCCTTACTCTTCCCACTGTTCAAGAGTGCATGGACTTAAAACTGGGCCCTGCTATCAAACTTTGCCATCACATAGAGAGGATCAAGTTCGCTTTTTATGAACAGTTTGCCAACTGAGAAGGACAACCAAAGTAGGCTGTATCTTTGAAGCACAAAATGCAGCAAATCCTTCGCCCTGCTCTACAAGTGGAGCTGAAATAGTCCCAGGGCTCTGGGCCTGCAGGTGTCGGCTTGCTCTCTTTGCACTTTCAGGGAAGGAGGACCCACGCTGAGGAAGCAAAAACTGCACAAAAGTGGCTCTCCCACCAGTGAAAATGTGGGCATCTCTTGTTCATCAGATTGCAATTTTAAAAAAAAGATTGTGAAGAAAAGACTCATATAAAGAAGAATAAGCATTTCCACTGGTGTGGCCTGGAAACGAAGAATAATCAAGGCTGCTGGCAAGCAACCTTTTGATTTTCTTTTTGTTCTCTCTGTTCCTTCCCATTGTAGATGGAACTTTGTTCTCTGCTTTCTCTTTCTTGGGAAGAGAGGACATAGCTTTAAGTCGGCACTGATTTGGGACTGTGCCTCAGGCACGTCAGTGCTTCATTGTCATGTGTTTTAAAGCTTTTTTAAATTAAAAACGGTTCATTTTGGGGATGATTATGTGGCTCTAGGGTTTTGAATGTACAGTCACACTTTGATCCATTTTAAAATCTATTCTTAGGAGTTCCTTTGTTTACTACCTCTGTTGATAATTGAGCTCGTAGCCCTGTCTGAGGTTTTTTTAAATGATGCCATTTCTACATGAACACTAAAACTATGACAGAAGTTGGAGGAAAAGACACTGTTTTCTTTCTTAAGAGTAATGTGTGGCACTCACACCAGTTCCTTAAGTGACTGATCTAAGAACTCTACTGTCATCGCTTTCCATCCTAACCTCGGTTGGGCTGCCTGTTTCAAGTAATATCTCAAAGACTGTTGCTGTTTTAAGTTGAATTGCTCTCTCCCCACTAGTTCTCAGAGGGACTTCCATAGCTTTTATTTTGTATTTACTTTTCTCTACAGTTGTTTGTCCAACTTTCATTTTGAGAGTCCTTACTTTGGGTAAAAATCAGTAGGTGTTTCCTGGACCCACAGTAAAGCCCATTTCCCCATTTTTCTCAGTGTCTCTAGACAGATAGTATAGAAGCACAAAAGAGAAAATACGTTTTGGGGGAGGGGGGAAGTGATGCAGAACATCAAGTTTCTGTCACAGTATGTTCTTAGTGGCCGGATAAAGATTGAGAGATGGTTAAGGATTCTAGAAACATCTTTGACAAGTCACATTTACATTTTCTTTGATCGAACCTTTAAATTGAATGTATTCTACAGTCAGTTCCCACTCAAAAACTCAGTTTCCTTTTAACTGTTTCTTTTGACCCAGCTCAACTTGACATTAAACAGAAAAATTTTCACTTATGATTGCACTGGCTGTTGGCTGTAATAGAAGAATAGCATTTACTGTACTGTTTCTGCCATGAGGAATGAGGAAAGATACATACATAGGTTGCTTCTTTTAAATGGTTTGCTTTGCTGAATGGTTTTTATTTTTTTTAATTATCCTAGTTACCTACAAATTTATAACCTAATCATTCCTCTTCAAGATTTGAAAATGTTTTAAAACGACAAACTGGGTAAATTCTAAACAGTTATACAAATATAAGGTAATTTTGTTACAAATTTAAACTGATTGTGATTTTTTTTCCTTTTCTTCCCTGCTGTTCCACCTTTTTTTTTGGACCTTGGCAAACATTTTGTAGTCTGACTCTTCTCTTTATTGGATAATTTATGAACCACTTGAGTTCAAGCCCTCCAACCAAACCCTATATTAAAGCATCAACTCTTTGCTTAGGTTACTACCAGCTATACCTGGAAAGAAGATTTAAGTAAAATTAATCTGTTTGAATGTATTGGGAGATCCAGTTTTTAAAGTTTTGATTGATTCTGTGCCACTGCAAGAGAAGCATATGTAGGATGCTTGGGAACAATTAGTCTTAAGTAGATCAAGTTTGGGGAGCAGGTATCTTGCATAATAATATTTTCTGAGAGCGTAGCAGTCAACACACTATGGCAAGTTCCTTGAAGTAGATCACTGGAATAGAAAAGTCTGGAATTGATTAACATTGTTGTCTTATTTAGGAAAGTGGTATTTATTTTCTAAGAGAGAATTTACCAAATGTAATGTAACAATGAATATATTATCTCTCTTTTGACCTCTTCAGAAACCATAGAATTTTAAACACCTCCCTTCACAAGTGAGAGGGCAGAGCCCCTGAAAGATGAAATGCACGGACCTAAGTACAGTCTCTGATCAGAGTCAGACCCTAGCCAGCTTGTCTGTTTACACCATGATTAATCAAGCTCAGCTTTCTCCTAGAGAGAAGCTGACTTTAAACTGGACAAGTCAGTAGGGTTTTCGTTAATATTGTTTTGCATT EMBV3_36365 GAGAAGATCAACAAGATGGAGTGGTGGAGCCGCTTGGTATCCAGTGACCCCGAGATCAAT Gene GeneID:513277|NUDC:NM_001075607:158_cdna Constitutive 0 NULL GeneID:513277 2 GENE NUDC MGC140706 nuclear distribution gene C homolog (A. nidulans) EMBV3_14189 TCTCAGGGGCCAACTAGGCAGCTAACCTAAGCAAGAATCTGTGGGTTGTGCACTTATTTC Gene GeneID:281237|IFNG:NM_174086:7_cdna Constitutive 0 NULL GeneID:281237 5 GENE IFNG NULL interferon, gamma EMBV3_05057 TTCCTGTGCCCCTTACACAGTTTCTTCCAATGGCAACATCTCACAGAACTTCACCGCCAC Gene BVT0102_003395 + 0 NULL GK000027.2:33072113-33110520 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155475 1 XLOC_094736 Coding TCONS_00155475 XLOC_094736 NonCoding Coding WHSC1L1 27:33102442-33103248 x TSS116318 806 4 TCONS_00155475_2 63 0.983870967741935 1 0 0 7.66382105283304e-238 0.000607035418050308 3.09088199159293e-05 8.05337857051708e-282 0 0 0 0.000402538096295523 0.000107201278393417 6.24834761619544e-05 1.77453294822482e-05 0 8.10066982013652e-05 0 0.002752573982466 0.000411968158134307 0.00141724147578185 0 0 0 0.000524786320526777 0.000284555188241102 0.00169171659888367 2.92832991880579e-05 0 5.42138129241393e-56 0.000143674708258858 0.000132508087712123 0.0031553117660653 NM_001040549.2 TMED10 Bos taurus transmembrane emp24-like trafficking protein 10 (yeast) (TMED10), mRNA. 3e-50 203 73.35 0.433002481389578 NM_001201573.1 NUBPL Homo sapiens nucleotide binding protein-like (NUBPL), transcript 2e-33 147 67.83 0.619106699751861 0 noncoding 0 0 0 0 0.331300528762596 0.438091978596841 NA NA GTGCTGAGCAGCTTGTGGGAATCTTAGTTCCCACCAGGGATTGAAGCCCAGCCCTCAGCAATGCCAGAGTGGAGTCCTAACCACTGGACTGCCAGGGGATGCCCTGTATGGTATCTTTTTAATTAAAGTTTTTGTTCTGAGGTAATTTGTTAGTTCACAGACGAACTAACTCTGCAATAATGCAGAGCTTTCCTGTGCCCCTTACACAGTTTCTTCCAATGGCAACATCTCACAGAACTTCACCGCCACGTCACCACCAGGATGTGGACATTGATACGGAACAAGATGCAGAACAGTCCCATCGCCACCGCCGTTCCTCCTGTTGACCTTTCACAGCCACCCCTGCTTCTCCTTTCCCTCCACACTAAATCCGTGGCAATCACAAATCTGTTCTCCATTTCTGAATTTTGTCATTTTGAGAACGTTACAGAAATAGAATTGTATGGTATGTGATCATTAGAGGTTGGGTTTTTTGCCCACTCAGCAAAATTCTCTTGACATTCATCCAAGTTGTTTCCTGTATCTGTAGTTCTTTTTTATTGCTAATTAGTAGTTTGTGATATGGATGTACCTTTGTTCAACCTTCACCTGTGGAAGGATATCTGGGTGGTTTCAGTTTAGGGCTATTATGAATAAAGCTGCTATGTACATTCATGCACAGGTTTTTGTGTGGACATGGTTTTCATTTCTTTGGGATAAATGCCCAGGAGTGCCATTCTGGGTCATACGATATGTGCATGTTTAATTTTTTAGGGGACTACCAGACTTTCCTAAAAGTGAGGTTGTACCATTTGCATTCCCACCAG TCONS_00155472 s 5' 0 TCONS_00155472 s 5' 0 EMBV3_04336 CTGGCCTGTAGGACACAGAACTTCTAGCACAGACTTGGCAGCAAACAGGACTGAGGTCAT Gene BVV0102_188569 + 0 NULL GK000020.2:71165952-71182949 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114185 1 XLOC_069224 Coding TCONS_00114185 XLOC_069224 Coding Coding LPCAT1 20:71144850-71167619 = TSS85217 3275 1 TCONS_00114185_2 460 13 0.856728742094167 0.000821790045280688 0.000211365111878694 0.000263250044473339 0.00021823219457299 0.00010933769749114 1.27139776194212e-05 0.000143480313348908 3.17592990185808e-05 0.000502863941468727 4.49879321891488e-06 8.07022885274574e-06 1.77592701324574e-05 8.2938951173229e-06 2.49367794076735e-05 2.16242080086159e-05 0.00202976347812472 0.000494209862338136 0.0013161885022939 0.000720086215304669 0.000699453134845639 0.000204156688737654 0.00059354168635608 0.000636443443364311 0.00233817312711242 0.000851393572824122 0.00061322471854689 0.000237168325595481 0.000181108230102095 0.00011766605937295 0.000102744176413134 NM_001206811.1 LPCAT1 Bos taurus lysophosphatidylcholine acyltransferase 1 (LPCAT1), 0.0 5384 100.00 0.911145038167939 NM_024830.3 LPCAT1 Homo sapiens lysophosphatidylcholine acyltransferase 1 (LPCAT1), 0.0 1112 81.77 0.345954198473282 TCONS_00114185_2 sp|Q8NF37|PCAT1_HUMAN PCAT1_HUMAN Lysophosphatidylcholine acyltransferase 1; 0.0 784 80.45 0.997826086956522 3 coding 0 0 0 0 0.193912339692443 0.247072358098785 0.0282387383950677 0.544213204038256 CGCAGGTGGCCGTCATGACGCTGACGCTCTTCCCTGTCCGACTACTGGTCGTCGTCCTCATGATGCTGCTCGCCTGGCCCCTGGCGCTCGTGTCTTCGCTGGGACCCGCCGGGCGGGAACCGGAGCAGCCGCCAGCTTTGTGGCGGAGGGTCGTGGACGTGCTGCTCAGGGCCATCATGCGCACCATGTGGCTCGCCGGCGGCTTCCACCACGTGGCCGTGAAGGGGCGGCGGGCACCGCCAACGGAGGCTGCCATCCTCACCCTGGCTCCACACTCCTCCTACTTCGACCTGATAAAGTACATCCGGCCGGTGTTCGTGTCCCGGACAGACCAGGACTCCCGCAGGAAGACAGTGGAGGAAATCAAGAGGCGGGCACAGTCTGGAGGGAAGTGGCCACAGATAATGATTTTTCCAGAAGGCACGTGTACCAATAGGACCTGCTTAATCACCTTCAAGCCTGGTGCCTTCATCCCGGGGGTTCCCGTCCAGCCTGTGGTTTTGCGGTACCCGAACAAACTGGACACCATCACGTGGACGTGGCAAGGCCCGGGAGCGTTGAAAATCCTGTGGCTCACCCTGTGCCAGTTTCACAGTCAAGTGGAAATTGAGTTCCTCCCCGTGTACACGCCCTCGGAGGAGGAGAAGAGGGACCCCGCCCTGTACGCCAGCAACGTGCGCCGTGTGATGGCAGAGGCCCTGGGCGTCGCTGTGACGGACTACACGTTCGAGGACTGCCAGCTGGCCCTGGCGGAAGGCCAGCTCCGTCTCCCCGCTGACACCTGTCTTCTGGAGTTTGCCAGGCTTCTCCGGGGCCTGGGACTAAAACCAGAAAAACTTGAACAGGATCTGGACAGGCACGCAGAAAGCGCCAGAATGACGCAGGGCAGGAGGGTGACGCTCCCCGAGTTCGCGGCGCAGCTGGGGGTCCCCGAGTCTGAGTCGCTGGAGGACCTGTTCTCCCTGTTTGATGAGGGCGGCGGCGGGGAGGTGGACCTGCGCGAATACGTGGTCGCCCTGTCTGTCGTCTGCCGGCCGGCCCGGACCCTGGACACCATCCAGCTGGCGTTCAAGATGTTTGGGTCCCAGGACGGCAGCGTCGAGGAGCACGCCCTGTCCAGCATCCTCAAGACGGCCTTGGGGGTGGCGGAGCTGACAGTGACCGACCTCTTCCGGGCCATAGACCAAGAGCGGAAGGGCAGGATCGCGTTTGCCGACTTCAAGAGGTTCGCGGAAGCGAACCCCGACTTCGCGGAGGAATACCTGTACCCCGAGCAGACGCGCCCCCGGAGCTGCGCCCGGACGCCCCCGGCTCCCACCCCCAACGGCTTCTGCGCCGACTTCAGCCCCGAAAACTCGGCCACTGGGACGGAGCCTGTTCGCAAGAAGCTGGACTAGGGCGGAAGGGTCTGGAGAGACCAGGCCTGTGCTCAGCCGGCCTCACACTCCCGCGCGAGCTGCCTGTGCCCTGCCCTCGGGCCGGGTCCTGGGCGGAAAGCCGCAGCAGCTCGCGGGGCCGCTCCGCCCGCTTCCAGGCGGCGCTCGGGGGCCCCCCAGTTGCTTTGTCCTCACCTCGAGCCTCGGCTCTGCCCCCATCCTCTCCCTCGGGCCCTCCGGTCCGGTCCAGGCAGTGCGGGCCGGCGGCCTCCACGGGCACTTGAAGGTGTGACTCCCGCCCGCGTGTCGATTCCAGCACAGTCTCCGCCGCCCTCCGCGGAGTCCGCGGGCGGGGCCGCCGTCGGATTTTTAAACGTTTCTATATTTGCAGGAGCTCATGAGTCTTTTGTAAACTTCATTTAGATACTTCAGGAAACATTCAGCCTTTTTTTTTACCAGAAGAGAATCGTTTTTCTACTTCGTTTTCCTTTGAGGGTCGGAGGATATTTATTTATAGGCCCTTTTTTGGTAGATCCTGGGGCTCTTTGGGGCTTTGAGTTGACCTTCTCTCCAGCCCCTTCCATCCGGGCAGCCCCCCTGCCCCGCCCCTGCGTTGGGGAGCCACAGGCGCCCCGTCCGGAGCCGCCTTCGTGCCGCCTCAGCCCTCTTCAGCCCCGCTGCTCTTACACCAGCTTGGGGTTTCTGTTTCGGGGTGACCGGATCCACTTCAGCGAGTGCAGGCTGGGACCAGAGCCCAGAGCGTGGGGAGGGGAGTCCGGCCGCGGTGGAAACCGGCGGGGGCTCCTGTCTCCCCGGCTGGCACCCTGAGGGCACAGTCAGTCCCCAGGAGGCTCCGCCAGCCGCTGACTCCCCCCAGCACCCTCCTTTGCCCCAGGTTTCCCGGGGTATCAGGAGCCAGGGGAGCCTCAGGGAAGGAAGGTGTGGGGAGCCGGTGGTGGGGTTCAGGGAGACCTGGGGGCTGGGGTCCCTGTCTATGCCCGGAGGTGGGGGGCAGCAGCTCCGGGCTCAGGGAGGGGCTCCAGGGGCCTCCTTCACGCTCACGAAATGACCTTGATTCATTTCCTCAGGACATGATTAGAAACGTGTCCTCAAAGCACAATGACAACCACACAGTGTGTTTCTGGAGCAAAGCTTCTGGGTTTGTTTGGGATTTTTTTTTTTTTTTTTTTTAATTTCCAAGGCGATTGGATTTTGTCTTAGGGCCATGGAAAGTGGCCACCAGAGCTGGAATTGCAGAACAAATATTTACTGACTTCCTGAGGCTCGGAGACCTACATGTCGACAGACAGAAGGACAGGCGTCAGGAAAGGAAACCCCCTTCACTTCCGTTCATTCCAGAGCCCCTCCCGCCCCGTGTGGGGCAGGGGGCACCGGACATCATTCCAGGGCGCTGGCCTGTAGGACACAGAACTTCTAGCACAGACTTGGCAGCAAACAGGACTGAGGTCATGACCATAGAGTGCATGAAGGTTCATCTTTACAAGACAAAGCCCCGCGCCCGGCCATGAAGGAGGTGAACGAGCCGAGATGTTCTGAGCAGGGGCCTCGGCCCGCGTCTGTGGATGAAGGGGTTTTGAATGAAACGCTGCTATGCGTTTTCAGGAAAAAATCTCTGATAAACAGACCCTGAATGGATGTTTGTTCCTCCTGATTCTCTTTTCTCTTTCGTAGTGACTTAGGGCCGTGGGTTCAGAGCTGTGAATGTACAGAGCTCAGGGGTGAATCCCCCTTGGGTGGGACCAGGAGCTGCGAGGGGCCCACCGCCTGCAGGGGCCCCACAGGGTGCTGGGGGTGGGGGAGGGAATGGGCAGCTCCAAAACAGCCAGAGGTTTTCAATAGAACGAATAAAACATAGCGTCTTAAATGCTTGAGATTGCA EMBV3_22711 AACCCCCAGTCTGATCTTCAGGCCCAGGATAGATGTCATAGAATTGGTCAGACAAGGCCA Gene GeneID:540933|HELLS:XM_002698391:286_cdna Constitutive 0 NULL GeneID:540933 26 GENE HELLS NULL helicase, lymphoid-specific EMBV3_16657 GAAGTGAGGGAACAGCATCCAGCACCTCTAGGACAGATCATAGGAACCAGACACAGGAAA Gene GeneID:510406|LOC510406:XM_002707809:15_cdna Constitutive 0 NULL GeneID:510406 3 GENE LOC510406 NULL similar to cytochrome P450, family 2, subfamily J EMBV3_09782 TACAGCACGTCGGTCACCGGCTCCCGCGAAGACTATGAGCTCTTCGTGGAGGCTGTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18541 AAAACCTATGGAAAACAATACAAAGAAAAGGGTGCTTGTGGTTCTTGCTGGGCTTTCAGT Variant GeneID:327711|CTSS:NM_001033615:34_cdna 192^464 1 EMBV3_29825 GeneID:327711 3 GENE CTSS MGC127029 cathepsin S EMBV3_17691 GAGTTTGGAAATGATTTGAGCAATGCCAAGGCAGAGAGAAGGAGTTGATATGGAACAGCT Variant GeneID:507032|PDCD2L:XM_002694924:3_cdna 497^702 3 EMBV3_21493 GeneID:507032 18 GENE PDCD2L NULL programmed cell death 2-like EMBV3_36903 ACCACCTCATCGTGGGTGTGCACACTGATGATGACATCACGCTGACCGTAGATGGCCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07073 CCATCGCTGGAAGGTATGGTGCCATCTGTGGATTTGGCCTTTCATTGATCAAATGGATCC Gene GeneID:512310|NDFIP2:XM_002691904:18_cdna UTR3_Alt 3 NULL GeneID:512310 12 GENE NDFIP2 NULL Nedd4 family interacting protein 2 EMBV3_12326 ACTTGAGCACAGGGGGGTAGGAGGGAGCTGTCCATGAGGACATAACTCAGTAGAAAGCAT Gene BVV0101_029948 + 0 NULL GK000004.2:79997769-80866407 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15776 CTGCTCCTGCTTCTTGTGTCCTGGGGCCACCGCACGGCCTCAGGAGTCGCCCTACCTCCT Gene GeneID:617680|PTH2:XM_002695117:605_cdna Constitutive 0 NULL GeneID:617680 18 GENE PTH2 NULL parathyroid hormone 2 EMBV3_37817 GAAGCCCCTTCATTTACAGACGGGACACTGAGGTTTAGAGCTGAATGCCTTGGCAAAGTC Gene BVT0102_276541 - 1 EMBV3_10148 GK000021.2:62772149-62793023 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121836 TCONS_00121834 TCONS_00121835 TCONS_00121837 TCONS_00121838 1 XLOC_073496 Coding TCONS_00121837 XLOC_073496 Coding Coding ATG2B 21:62789368-62870435 j TSS90662 11269 1 TCONS_00121837_8 1765 41 0.861495571509634 4.35780589929653e-06 0.000769414114170393 1.70707502690167e-07 7.64588333498462e-08 4.77881845484662e-08 0.000168195111418638 8.31660618664319e-05 0.000357844760476346 0.000598819725800895 0.000394752431225784 0.000128984488835189 4.7456358877689e-08 2.78943746787149e-06 8.93952704814689e-05 4.61802286511586e-05 3.59992909984502e-07 2.41438101069863e-05 0.000851112014075326 2.01106209823692e-06 0.00133389054537837 0.000132758055745402 9.1534142339932e-12 0.000277675703342885 0.000369920466099796 0.00019805826626419 0.00026212756367439 1.79025687426081e-09 0.000171318242779168 0.000142857895707493 5.96698245434452e-05 XM_005222199.1 ATG2B PREDICTED: Bos taurus autophagy related 2B (ATG2B), transcript 0.0 9972 100.00 0.490549294524803 NM_018036.5 ATG2B Homo sapiens autophagy related 2B (ATG2B), mRNA. 0.0 7319 88.61 0.502262844972935 TCONS_00121837_8 sp|Q96BY7|ATG2B_HUMAN ATG2B_HUMAN Autophagy-related protein 2 homolog B; 0.0 3364 93.33 0.984702549575071 2 coding 0 0 0 0 -0.0169060638465205 0.915928403038665 0.00842749381894264 0.872693431323239 GTGTGGCGTCACTTCCGCCTGTGCCCGGCGGCGCGCCGGCTGTCCGGGTCTCGCGCACGCGCCGCGCCGGGAGCGTCACAGAGCCGGGAGCGCGCGCCCCGCGGATGACAACAAATTCGTCGTGCGGGCGCTGTGGAGGTGTCCACCTCACTGTGGCCTTAGGCCCTGCCGTCTCCCCGCGTGCTCTCTTGTACCCTTCTCTACTGCCGCCAAGGACCCTCCTCGGAAAACCCCCCGGGCTTGGGACTAACGGGGACTCCTCCGCGACTTGTCCCCCCCAGGCCTAACGCGAGCGGCGCCGCACAGGCGATGGGGTCGCCCTGAGGGACGCTCGGAGCCGAACGGGCATGGAGGGGCCTCCCCGGGCTTAGGCTTCGCCGAGGCCTGGGCAGGCCGGCCCCGGGATCCGAGGCGCCGCCACCAACGCCGCCGCTGCCCCCGGCGCGGCCTGGAGCCGGAGCCTGGCCGGAGCCCCCAGGCCGGAGCCGCCCGCTGCCCTGCCAGCCCAGCTGCCAGCCCTCACCATGCCTTGGCCGTTTTCGGAGTCCATCAAGAAGAGGGCCTGTCGGTACCTCCTGCAGAGGTACCTGGGCCACTTCCTGCAGGAGAAGCTGAGCCTGGAGCAGCTCAGCCTGGACCTGTACCAGGGCACCGGGTCCCTCGCTCAGGTCCCCTTGGACAAATGGTGTCTCAATGAGATCCTGGAGTCAGCAGATGCACCTTTAGAAGTCACAGAAGGATTCATACAGTCAATTTCTCTGTCCGTTCCATGGGGCTCCTTGTTGCAGGACAATTGTGCACTGGAAGTGAGGGGGTTAGAAATGGTCTTCCGACCTCGACCCCGCCTAGCATCTGCTTCTGAGCCCATGTATTGGTCAAGCTTCATGACCAGCAGTATGCAATTGGCAAAAGAATGTCTTAGCCAGAAACTAACAGATGAACAAGGAGAAGGATCTCAGCCTTTTGAAGGACTTGAAAAGTTTGCTGAAACCATCGAAACAGTACTAAGAAGAGTAAAGGTCACTTTTATAGACACTGTCTTGAGAATTGAACACGTGCCAGAAAATTCCAAGACTGGAACTGCACTTGAAATTCGAATAGAAAGAACCATGTACTGTGATGAAACTGCTGACGAGTCCTCAGGAATTAACGTACATCAACCCACAGCTTTTGCTCACAAGTTACTTCAGCTCTCTGGAGTGTCTCTCTTCTGGGATGAGTTTTCTGCATCTGCAAAATCCTCCCCAGTGTGTTCAACTGTGCCAGTGGAAACAGAGCCAAAGCTGTCACCTAGCTGGAATCCAAAAATTGTTTATGAACCTCACCCACAACTAACAAGGAACTTGCCAGAAGTAGCACCTTCTGACCCAGTGCAGATAGGAGGGCTCAATGGTAGGCTGGAGTTGAGTCTCACATTGAAACAGAATGAAGTACTTCCTGGAGCTAAGCTGGATATTGATGGGCAGATAGACTCTATACATCTGTTCCTGTCACCCAGGCAGGTGCACTTACTTTTGGACATGTTAGCAGCTATTGCTGGGCCAGAAAATTCAAGCAAAATTGGATTAGCTAATAAAGATAGAAAAAACCGACCCATGCAGCAAGAAGATGAATATCGAATTCAAATGGAATTGAACCGGTATTATTTGAGGAAAGACTCCCTCTCTGCCGGTGTGTCCTCAGAGCAAAGCTTTTATGAGACAGAAACGGCTCGTACACCTTCTAGCCGGGAAGAAGAAGTCTTCTTTTCCATGGCTGATATGGACATGTCGCACAGTCTCTCTTCTCTTCCACCCCTTGGGGAACCCCCAAATATGGACCTTGAGTTATCATTAACTAGTACATATACAAACACCCCAGCAGGATCTCCATTAAGTACTACTGTGCTTCAGCCAACATGGGGAGACTTCCTTGATCATCATAAGGAACAGCCAGTCAGAGGATCAGCGTTACCCTCCAACCTGGTTCACCCAGCATCTTTACAAAAGACTGCTCTCCCCTCTAGGTCTGTTTCAGTGGATGAATCCAGGCCTGAACTTATTTTTAGAGTAGCTGTGGGAACGTTTTCAATCTCTGTGCTTCACATTGATCCTTTATCTCCACCTGAATCATCACTGAATGTTAATCCATTGACACCAATGGCGATAGCTTTCTTTACTTGTATAGAAAAGATTGATCCAGCACAATTTTCAACAGAAGATTTTAAGTCTTTCCGAGCAGTATTTGCAGAAGCTTGCTCACATGATCACCTTAGATTTATAGGCACTGGCATCAAAGTGTCCTATGAACAAAGACAAAGATCGGCGTCCCGATATTTCAGTACTGATATGTCCATTGGGCAAATGGAACTTTTGGAATGCCTGTTTCCAACTGATTCTCATTCTGTTCCTCCTCACTATACAGAGCTTTTGATGTTCCATTCCAAAGAACGAACTGATTCTCACCTCCCTGTGTGTCTTCAGCTTCATTATAAGCATTCTGAGAATAAAGGACCTCAGGCTGGTCAAGCAAGACTTAGTTCCATTCCTCAGAAGGCAGAATTACAGGTTAAGTTAAATCCAGTGTTTTGTGAGCTGGATATCAGTATTGTGGACAGGTTAAATTCCTTGCTTCAACCACAGAAACTCACTACAGTGGAGATGATGGCATCGCATATGTATACTTCATATAATAAGCATATTAGTTTGCACAAAGCTTTCACTGAAGTATTTCTAGATGATTCACATAATCCTGCAAACTGCCGGGTATCAGTACAAGTTGCCACGCCAGCATTAAACCTTTCTGTTCGCTTCCCAATACCTGATCTTCGGTCAGATCAAGAGAGAGGACCATGGTTTAAGAAGTCACTTCAGAAGGAGATTCTTCATTTAGCATTCACAGATCTAGAGTTTAAAACTGAATTCCTAGGAGGATCAACCCCTGAACAAGTTAAATTGGAACTTACATTTAGAGAACTAGTCGGGTCATTCCAGGAAGACAAAGGAGAACCATCTATTAAGTTTTTCCATGTGGCTAGTGGAGGAGATGGAGATACAACGTCATCAGATGACTTTGACTGGCCGCGAATTGTACTAAAAGTGAACCCACCAGCCATGCATTCCATTTTGGAGAGAATAGCAGCTGAGGAGGAAGAGGAAAGTGACGGCCACTATCAGGAGGAAGAGGAGGGAGGCGCTCATTCCCTGAAGGATGTCTGTGATCTGAGAAGGCCAGCTCCGTCTCCCTTCTCTTCCCGTAGAGTAATGTTTGAAAATGAACAGATGGTGATGCCAGGAGACCCTGTAGAAATGACAGAGTTTCAGAATAAAGCAATCAGCAATTCTCACTATGTGCTGGAACTTACATTACCCAATATTCATATAACACTACCTAATAAAAGCTTTTATGAGAAGCTTTATAATAGGATCTTCAATGATTTGCTGCTCTGGGAACCAACAGCTCCTTCGCCAGTAGAGACATTTGAAAATATTTCGTATGGTATTGGGCTTTCAGTAGCCAGTCAGCTGATTAATACCTTCAGCAAGGATAGTTTTAGTCCGTTTAAATCTACAGTTCACTATGATGAGGAAAGTGGATCTGAGGAGGAGACTTTGCAGTATTTTTCTACTGTTGATCCCAATTATCGTTCTCGTAGGAAAAAAAAACTAGACTCCCAGAACAAGAACTCACAGAGTTTTCTCTCAGTTCTTCTGAGTATTAATCATGGGTTAATTGCAGTGTTTACAGATGTAAAGCAAGATAACGGAGATCTGTTGGAAAACAAGCATGGTGAATTCTGGTTAGAGTTCAGCAGCGGCTCGTTACTTTGTGTGACGAAGTATGAAGGCTTCGACGACAAGCACTACGTGTGCCTTCACTGCGGCAGTTTCAGCCTCTACCACAAAGGCATAGTGGATGGAGCAGTTCCTTCTACAGAAACACGACTGCCTAGTTCAACCCGCCCACATTGGTTAGAACCTACTATTTATTCCTCTGAAGAAGATGGCCTCAGTCGAGCTTCTTCAGATGGTGTTGGAGGAGACACTTTGAATATGCTGTCTGTTGCAGTTAAAATAGTGTCTGATAAATCAGAGTCCAATACAAAGGAGTTTCTCATTGCTGTAGGGCTAAAAGGAGCTACTCTCCAGCATAGAATGCTTCCTTCTGGGCTTAGCTGGCATGAGCAGATTTTATACTTCTTGAATATTGCTGATGAACCTGTTCTGGGATATAATCCTCCAACTTCATTTACAACCTTTCATGTTCATCTCTGGAGCTGTGCACTTGATTATAGGCCTCTTTATTTGCCAATCCGATCTCTTCTTACTGTTGAAACATTCAGCGTTTCAAGTAGTGTCGCCTTGGATAAATCATCTTCTACTCTCAGAATAATTTTGGATGAAGCTGCTTTACACCTGTCTGACAAGTGTAATACTGTTACTATAAATTTGAATAGAGATTATGTTCGTGTGATGGATATGGGACTTTTGGAATTAACCATAACTGCAGTAAAGTCTGATTCCGATGGAGAGCAAACTGAACCGCACTTTGAATTGCACTGTTCGAGTGACGTCGTCCATGTTAGAACGTGCTCAGACTCTTGTGCTGCTCTAATGAATCTAATTCAATATATTGCAAGCTATGGGGACTTACATGCCACTAACAAGGCAGACGTGAAGCCAGGAGCTCCTCAAAGAAAGGTGAAGGTAGATTCTGTTGGTCGGTCATCCTCACGTGGTCCAGTACTTCCTGAAGCAGATCAACAGATATTACGAGATTTGATGAGTGATGCTATGGAGGAGATTGACATGCAAGAAGCAGCTTCATCTGTAAAACCACAGTCTAATGGTGTTTCTGATGAAAAATCTCAAGTTCAGGAACCATGTTGTTCAGACCTCTTCCTGTTTCCTGATGAGAGTGGAAACGTGTCCCAGGAGCCTGGCCCCACTTACGCCTCATTCACCCACCACTTGATTAGTGATGCAGTGACAGGCGTGCCCACGGAAAATGACGACTTTTGCATTCTTTTTGCACCAAGAGCAACTGTTCAGGAGAAGGAAGAAGAACCAGTTGTAAAGATAATGGTTGATGATCCAATTGTGATAAAAGAGAATTATTTTAGTCTGCCTGTTAAGAAGACAGATACGAGCAAAGCCCCGTTACACTTTCCCATTCCTGTCGTTCGGTACCTGGTTAAAGAAGTCTCTCTTGTTTGGCATCTTTATGGAGGAAAAGATTTTGGAACAGCCCCTCCTACTTCTCCAGCTAAAAGTTACATTAGTCCCCATAGCTCACCTTCTCACACACCTACAAGACATGGACATAATATGGTTTGTGGGGGAAAAGGAAGAAACCATGACTTTTTAATGGAAATACAGTTAAGCAAGGTGAAGTTTCAGCACGAGGTGTACCCGCCCTGCAAACCAGAATGCGAGTCGAGCCTTGTGGAGCACCCGGTGTCCCGGCAGGTGTTCATCGTGCAGGATCTTGAAATTCGAGATCGTCTGGCAACGTCACAAATGAATAAATTTTTGTACCTGTATTGCAGTAAAGAAATGCCTCGGAAAGCTCATTCCAACATGTTGACAATTAAAGCACTACACGTGCGTCCAGAGTCTGGCAGGTCCCCACAGGAGTGCTGCCTCAGAGTATCACTAATGCCACTTCGCCTCAATATTGACCAGGATGCCTTGTTCTTCTTGAAGGATTTCTTCACAAGTCTTTCTACAGAAGTAGAGCTGCTCATGACTCCAGATCCAGAAGAGAATTTAGATTCACATCAGAAGTTCCTATTCGACTTGATTATCATGGGAAACATGTATCAATGGATCAGGGTACATTAGCTGGGATTTTGATTGGTCTCGCCCAGTTAAACTGCTCTGAACTAAAGCTGAAGAGGCTTTTCTATCGGCATGGTTTGCTAGGTGTGGACAAATTATTCTCATACGCAATCACCGAGTGGCTTACTGACATTAAGAAGAACCAGCTGCCAGGAATCCTGGGAGGTGTTGGGCCTATGCATTCACTAGTACAGCTAGTGCAAGGCCTCAAGGACTTGGTCTGGTTACCAATTGAGCAGTACCGAAAGGACGGCCGCATTGTCAGAGGGTTTCAGAGAGGGGCTGCCTCCTTTGGCACCTCGACAGCAATGGCTGCTCTCGAGCTCACGAACAGAATGGTTCAAACCATACAGGCAGCAGCGGAGACTGCGTATGACATGGTGTCTCCAGGCACCCTTTCTATCGAGCCCAAGAAGGTCAGGAGGTTCCCCCATCACCGGTTAGCCCACCAGCCAGTGGACCTGAGGGAAGGGGTGGCCAAGGCCTACAGTGTCGTGAAGGAGGGAATCGCAGACACGGCTCAGACCATTTACGAAACTGCTGCTCGGGAACACGAGAGCCGGGGGGTGACGGGCGCCGTGGGGGAAGTCCTGCGCCAGCTCCCCCCGGCCGTGGTGAAACCTCTGATCGTCGCCACAGAAGCGACATCGAATGTCTTGGGTGGCATGAGAAACCAGATCAGACCAGATGTTCGGCAGGACGAGTCGCAGAAGTGGCGCCATGGGGACGACTGATGTTTCAGACGAGATTCTTGATGAAGACGAGGGGGGAGATGTGGAGCAGAGGGCCCCACCGGCGACTTCAGAGGGAACTCATTTACTGTTACCGTGCTCATCTCAGGAACAAAACCATTTCTTAGTGAGATAATATAGTATCAAAGCAACATGCAACCAAAACCTTTTGACATTTTAGGGCTAGTTGGTACTTTCCAGTAGACATGTTTGGTGGCTGGTGTCAAAAGTCCGTAAAGCATTTGCTGCCAAGTTAGTGGAATGCTTGCTTTTATTAAAATGACTGTAATCTTCCTTGTTACAGACAAGCTATCATTGGAAACCTCCTTTTACAGTACAGGGTGCTCAGAAACGTTTTGAGTACTTTGAAAGCACTATATTTATGTTGCTCCAAGGAGTTGATTTTTCTCCAGGTTTAAAGAGAATCACAGCTTCGAAACTTTCATTAAAAATGAGAGACAGAAGCCACAGGGAAAATAAAGCAAATAGGATTTTCAATATAAATATCAGTGAGGAAAAAATATCCCAGTCTGTTGGAGTTAGTGTTCACGCAGTCAAGAACGTCGTTTCCATTTGCTCAGAAAATCCTTCCATGGGAGTTTGAGAACATGAATGTCGCAGACTTGTTCTGTTGTGTTGCACTTTATTATGTGTGTGTGTGTGTGTTTGTGTGTTTAGATTAATACAAGTCATGTGCTATATTCTACATGTAATTTACAGAGTTACACAAACTATAAAGAGGACTAAGTCTGAAGGTTTTTGGCAAAGGAAGGTAACTCAAATGCAGTAACTTTCATTTATTCTAAGTATAATGAAAATGTGCATTCTGTGATGAACTGGGGCCCATATAATTGTTTATTTGTTCAAATTTAAGCAGGTATAGTGCAAGCTTATTAGGCGTATGTGGAAAGGGAGATTGAACGTGGTTTTTACTCTTTTGAAATTAGCCAAAAATCCTCCAGATATGCCCTAGTCAGCTATTTCGAAGCACCATTTTTACTTGGTTAACAATGTACATTTTGATATTCTGTCAGGAATGAATAAAGTATTTTTATTTAAAGGTAAAGTTGTTTTATGCTTCCATGAATATTTTGCTTCTCTTAGAGCATATTCATAGATGCAATGCTAGGGTTTACTCCAAAATCCTTGGGAACACTTTCTCAAAATTGATTTTGCTTAATGTTAAGCAGATCATTACCTAGATGTGAGAAGGAAATGGTTCTCCAGAACTCTGTCTTTGACTTTAGATTAATCTAGCAGAAAGAAAACATAGGACTTTGTATTCATCCTCTAAAGTGTCATGATGTGAACGCTCTCATTTCCTAGAATAGGGAGATGCATTCGAGTTGAAGTTGAATTTCAGAACTACTTTCAGTTTGGGGTTTGAAAAATGACATTGAATCAGTTTCATTCTTGAAACTTTCTACAAGAAAGCAAAAATCCGAACATTTAAAATTTGTAAAATTTTGTTAAGTAGCATGTAATTCTGTCTTGTTCTCTTTTTACTGCTGGAAAACTTGAAAGGCTAGTGCTCAGAAAACCACCTACTGAACCATCAGAGGACCATTTGTTACTGGAGCCCAGCTGGATGGAGCCCACCTAGAATGTGGTCCTGAGTACACACGAATCATGGCTGTTTACTGTATGAAGCTTCAGCCTGCTTCTGGGGCGCTCTCTGGGCACCCTTGCATCAATCCCAGCATTTTCCCTTACATGGAACATGCTGGGTATGGTATCTGTGATGAGTAATCAAACTGAAAACCACTCAAATTTAAAAATATAAAATCTCCTTAACTTTTAAATATATTTTCCATATTGTATCTAATTGAACTTAATTAGTATAGGGAGAAATAATCATCCTCTTCTCTGAACTCTGAGTTGCAGATGGACCGATTTTTTGACAAATTGGGTTTATAAGTCCCATTAAGCATATCTTTATTATGTAATTTCCATGGCTGTCTCTTCTGCCCTCCTGCACCTGCTTTTGATAGAATCTACCTGTGTGATCAGAAACCTTGTGTCTCAGAAAGATTTAGTGTCAAGGGTCTGTTCATTGTCACTTTAACCAAGATTCTGTTTACCTGAGGTGTTTACGTGGAAGAAGTGTGTGTGTTTGAACTTTGCCATTGTTAAATATCCTTAATTTTTTTCTTTTTTAATAGCGTCTTTTCAAACTTTTACACCATGCCGATACAGTAAAGAGTGTTGGCAGGATGCTTGTGCGGCCAGGTCTGTGACTTACCAAGTGACTTTGCCAAGGCATTCAGCTCTAAACCTCAGTGTCCCGTCTGTAAATGAAGGGGCTTCTTATGACAGCAGAGATTTTCAGATGATTGGAGCATGCACACGTGTGCGAGCAAGCATGCAAGTGGGAATGACGGTGTGGGATGAAGCACTTAGTCGTGGGCCCCAGGCCTGGGACACCTTGAATAGGTGGCATTGTCTAACAAGAGCCCTGGCTGCATGGCACCCACGGAAGCCCCAGCTCCTCCAGGTCTCTCATCTCTTAGACTAATGTGTTTGTGAACGGTGCCTTCAAGGCTGACCTCTTCATGGGGCAGACTGAGCATGTCTGTGTATCACTGCATTGAGTCTGTGTGTGTATCTCCCCGAGGGTCCAGGTAAACAAGCTTGATCAGGAAGCATCAGTGAGTTTCAGAACCTCCCAGGGTTACAGGAACACAGTAAGACCGCCTTACATTATAAAGGCAGCAGGGGCCATGGTGACGTCTTCTCTTGATTCGGGTTGATTGGGATCCCCTGGTTTCCCTTCCTGTCTGTCCACAGATGGCTATCATTTACAAGTACAATGTCCGCTCAGCACTCGCCTTTTAGGACAGATAGGATGGCATATTTTTTTGTAGATATCATAGCAAAGACTTCCATTTTAGTAAAGCTTGAGTCCAACTTGGATTCCCATTAAGCACATGTATGTAACATCAATATTTTTATAATACAGAACTCGAGAAAAAAAAAAAATCTTCCCAAGTAGCCATGTGCCTAAAATGGCAAAAAGACAAAACACTAGTATCTCTTGCTCCTGCTATGTGTCACTTTTAAATGCTGTTGAAATAGTTTCAGTTTTAAGGGAATAACTTTTTAACCATCTCCTTAAAAACTGTGTCGTGTAGGTTTGGTGCCTTCGTTCAATTCTCGAACAGGCCAAACAACTACGCCCACTACCTGGGGGCCACTCGCCACCCGCGGGCACTGTCGAGTCAGCTCGTGTGCCCCAAGCTTGCCCTCACCAGAGACGAGACAGGGCAGAGGTGGAGTTCAGCAGTTTTAAACCGGAAGTCCACACTTGCACTAAGTAGTTTTAGGATTAACAATTTATTATCTTAACATTAATTTAGATCTTATATATATATATATATAAAAGCCACATGACCTGACTTAAGAATAATCATTTAACTCTGCTTTGCTTCAGTTTTCTCAGACCTTCGTGGGGTGTGTGTCCCCAGCTTCATGGGGACTGTGGCAGGGGTAGTGGTCTGTGGTGAGCAGTCTATTCCCTGCTTCCCTTCACGTCCTCTTGACATGACCTAAGACATGAGAGAAAACGTCTGTAAAGTTCTTTAAGCCTCTTGAAAGTAAAAGGCCCTATGCAAATACAAAGTGATACTTGGTATCGGCAGATGCATCAATTGGAGGGACCCATTGGTACCAAATTGAATAAATCAAATACAAGTTTGTGAGTCTCAGGTAGAAAAGGAAAGTTGTTTAGATAGTGTTTAGATAGTGAAGGGGGAGAAAAAAGATTTTTTTTTCCCCCTTACCACCAAGAAATCTTGTTTCTTTTTATGGAAAATACAGTCAGTCTTTTCATTGAGAATAACTGAGTGCTTTAATGCATTTTATTTTTATCGCAATAGTTTCAGGATCATGCTAGGCACTCTGCTCCCTGTAATAGACTTTATATGCACAGTTGCAAGTCAGTCAGTTTTAATCAAAAGAATTTCCTTTTCATGGTAGTGTCTACAAGTCAAAGAGAAGGCCGTCTAGTACATCACAATTAGTTTCTTTGTGGCGAGGGATAAGAAATTTATGTGAGTTTCAACAATTCATATTTTGAAATGTCAGTAGTTTTGAAAAACAGAGGTGTTACACATTTTTTTGCCTCCTGTACCCAGTGTCAGCCCCTTGGTTTCAAGCACGTAGCCTCATAGAAGACACCAGAGTGCTATCTGATGTATTATTTCAGGAGATTGTAGACTTGATACTGGCTGACTCAAGGACATCTCTAGTGCTGTGTGTGTTGGGAGGGAGGGGAGGTGGGGTTGAAATGGCAGCCCCTCCTTTAAGAGTATGTTTACTTTGCTGTTTCACATGTATTTTGTGTATATGAAATGGCAGCTTCCAATTTCTAGTTGGATTTGTCTTATGTTGTTTGTATAATTTGCCATCACACAGGACTGTTTGCTTTTCCATTGTGAAATTTGGTAGGGACTCCAGTTCAGCTCTTAATGTTAATCCATCCCGATTTATTTTGGACATTGAATTGATCTCACCACAAGTAAAAAACACGTCGTGTATGTTGACTGTCGTCGTTGCTGTTTCCTCATGGAAGTAATTCTAAATGTAAATACTTTAAGAATACTGATGCTGTATGAGTATTTTTGTGGCAATGTTAACTTGTTAGTGTGACTATTTAAAGTATTATGAATTTAAGGATATTCTTGAAGAAAATTAAAATATTTACTCTTTGGAGTTTGCTTT EMBV3_42897 CTCTCTTCGCTCCGTCTCCACCCTGCCTCCCCTGAGCAAGTGAGGATGCAGCAAGGGAGG Variant GeneID:614849|C15H11orf59:NM_001034769:28_cdna 588^682 2 EMBV3_07466 GeneID:614849 15 GENE C15H11orf59 C11orf59 MGC127399 rhoA activator C11orf59 homolog EMBV3_14197 TGGCAACGGTAGATGACTTGCAGTTTGAAGGCCCCTTTTGGATATGTGCCACATTGGTCT Variant GeneID:511748|YIPF1:XM_002686382:193_cdna 192^524 1 EMBV3_14945 GeneID:511748 3 GENE YIPF1 NULL Yip1 domain family, member 1 EMBV3_03618 AGGTACTCTTTAGACTTCCGGTCGATGGAGAACAGGCTGAGGGAAGTCGAGGCCCGATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33830 CTCAGTGGTGTTACAAAGAATAAGTGTTATTTTTTTCTTGGTCTCTTGTTTATGTGGCTG Gene GeneID:100137827|ZNF828:XM_002692005:127_cdna Constitutive 1 NULL GeneID:100137827 12 GENE ZNF828 NULL zinc finger protein 828 EMBV3_36924 GTGGAGTTTGCTGAGATCACTGACACTGGCGTACTACAAGCACGCGTTAATGGGCTCTCC Gene BVT0102_294708 + 0 NULL GK000009.2:105598963-105655747 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243308 1 XLOC_149971 NonCoding TCONS_00243308 XLOC_149971 NonCoding NonCoding - 9:105610403-105610978 - TSS182986 575 2 TCONS_00243308_2 36 0.276521739130435 1 0 0 0 0 0 0 0 0 0 0 0.000722719798171871 3.98119736867991e-06 6.21857367831428e-06 0 0 0 0.000688998367330676 0 0 0 0 0 0 0.00114875035548044 0.000116623463789563 0 1.2252985513038e-05 0 0 0.000160412849523396 0 XM_005193869.1 NAT8 PREDICTED: Bos taurus N-acetyltransferase 8 (GCN5-related, putative) (NAT8), mRNA. 3e-23 113 78.52 0.226086956521739 0 noncoding AAGTGTAGTTGATGTTTACAATGTTGTTAGTTTCTGGTGTACAGCAGAGTGACTTACATGTTTATATGCATTTGTTTTCACATTCTCCATTATGCTTTACCACAGGATATTGAATATAGTTCACTGTTCTATACAGTAGGGTCTTGCTGTTTATCGTCCAGTATGTAGTAGCGTATAGCACGCTTCTAAAGTCAAGCTTTAGTGGGTGTGGTGGAGTTTGCTGAGATCACTGACACTGGCGTACTACAAGCACGCGTTGATGGGCTCTCCCTGACTGCCTGGTGGATGTTCAGCTCCCTCCTGCCTCCTGTCTCTTGTCTCTCTGTTTGAGTCTCCCTCTCCGCGGGGACCACACAAGCCTCCTCTTTACCTGGAATAAATGTTATCGTTTATTTTTCTAGCCGGTGGTGCTCAGGCCTTCTGATGGCTGCTCTTCCCCTGCCTCTGGCCCACGCAGGGTTCCAGTCCCGGTGGGTTCACCGTGGTGGCCAGGATGCCTGAGTTATGTCTGCTTTCTAAAACTTTTACTTCAGTCACAGAATGTCTCTCAGTGATGGTCGTTTCCAATTCAGTAT TCONS_00236558 . 5' 2680 TCONS_00236558 . 5' 2680 EMBV3_08755 CAGCTCTCTGCACTGTTTGTGGAGAAAAGAGTGATGGTATCCATTCAAACCAAATATGCC Gene BVV0102_100810 - 0 NULL GK000024.2:21398838-21448767 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138588 TCONS_00138592 TCONS_00138590 1 XLOC_084687 Coding TCONS_00138588 XLOC_084687 Coding Coding RPRD1A 24:21361831-21430981 j TSS103818 4334 1 TCONS_00138588_1 312 0.023534840793724 7 0.937424980838479 5.24175071332832e-10 7.62468534264705e-09 2.93008623435977e-07 3.16998134101737e-05 4.03263469392728e-05 0.000103368434692381 0.000145828753875487 1.07345513698952e-10 0.00032443539781989 0.000175314549079699 5.11626117580052e-09 3.53638885063113e-05 0.000136519167773663 7.0822368540853e-05 0.000152461906834075 0.00194565665002543 7.67406131115685e-07 0.00100518655055756 7.82973328844263e-05 0.000214373372708582 0.000333831844483088 0.000728006337665894 0.000216877930232465 0.000199402071890528 4.20925851463898e-05 7.64784335228753e-05 0.000143548831233006 0.000194547133483299 0.000210468941972792 6.83508510464739e-05 XR_239761.1 RPRD1A PREDICTED: Bos taurus regulation of nuclear pre-mRNA domain containing 1A (RPRD1A), transcript variant X4, misc_RNA. 0.0 6576 100.00 0.841024457775727 NM_018170.3 RPRD1A Homo sapiens regulation of nuclear pre-mRNA domain containing 1A (RPRD1A), mRNA. 0.0 4495 83.29 0.98084910013844 TCONS_00138588_1 sp|Q0P5J9|RPR1A_BOVIN RPR1A_BOVIN Regulation of nuclear pre-mRNA domain-containing protein 1A; 0.0 639 100.00 0.996794871794872 1 coding 0 0 0 0 -0.184580072485323 0.282474509182136 0.0245899150961926 0.623419213500975 AGGAGGCGAGGCCGCGGCGGGGGCGGCGAAAGTCTCCTCCGCTCAGCCTCACCGCGTGGGACGGCGCAAACGCGGTGCCGGAGGGATGTCCGCTTTCTCCGAGGCGGCGCTGGAGAAGAAGCTGTCGGAGTTGAGCAACTCGCAGCAGAGCGTGCAGACCTTGTCCCTGTGGCTCATCCACCATCGCAAGCACTCGCGACCCATCGTCACCGTGTGGGAGCGGGAGCTGCGGAAAGCCAAACCGAACAGGAAGCTTACTTTTCTCTACCTAGCTAATGATGTCATTCAGAACAGCAAAAGGAAGGGGCCAGAGTTTACAAAAGATTTTGCACCAGTTATAGTGGAGGCTTTTAAGCATGTTTCAAGTGAAACTGATGAAAGTTGTAAGAAGCACCTTGGAAGAGTGCTATCTATTTGGGAAGAAAGGTCTGTTTATGAAAATGATGTATTAGAACAACTTAAGCAAGCTCTTTATGGTGACAAGAAGCCTAGGAAGCGAACATATGAGCAGATAAAGGTGGATGAGAATGAAAACTGTTCCTCTCTAGGATCTCCAAGTGAACCACCACAGACTCTAGATCTCGTTAGAGCATTGCAAGATCTAGAAAATGCAGCTTCTGGTGATGCAGCAGTTCATCAAAGGATAGCTTCTTTGCCTGTTGAAGTTCAAGAAGTATCCCTTCTAGATAAAATAACAGATAAAGAGTCTGGAGAAAGACTTTCTAAAATGGTAGAGGATGCTTGTATGTTGCTGGCAGACTACAACGGCAGGTTGGCGGCTGAAATAGATGATAGGAAGCAGCTCACTCGAATGTTAGCAGATTTTCTTCGTTGTCAAAAGGAAGCCCTTGCAGAGAAAGAGCATAAATTGGAAGAATACAAGCGCAAGTTAGCCAGAGTTTCCCTGGTACGCAAAGAACTCAGGTCCCGGATCCAGAGCCTGCCGGACTTATCTCGATTGCCCAATGTCACTGGCAGCCACATGCACCTGCCCTTTGCGGGGGACATCTACAGTGAAGATTGATGACCAGTCTCTTTCCAGGGCCCAGGACTTTGCAAGAGATGGAGACAGGTTAGGTGGATAGTGCTGTAGTGTTATTTTTGTATATTGTTGAGAGAGTGACATTAACAAAAAGAAATGACAGGTAATTTATAAAATTGTTTAAAATGTTGGTTTGTTTACTATTTTATTGGTAAGTTAACATGACTTAGTTTAAACAAAGTGAATCTATGTGTATTAAGCTCACAAGTAGTGATTATTTTCAAAAGATCTTTTTGTAAATTTTTTTGATCCAGGGCCTTGTGAGAAATTTCCATGTTTCTATTTCTTCATGTATTTTCAAATGTTTTTCTTTATTTTCTTCAGTATCTAATCAGTGTATAGTATGTGATTCCTAAAGGGTAAGAACTAATCAGGTTGGTTGAGACTTTATTATGGTATAGTTAGGACTTGATTGTAGAAGGGACTAGGTGTTTCAACTTGATTTTCACCCTTCTCCTCAACCAAAACATCAGTTCTGTGCCTCTCAACACTTTAGATTCCTTATTCCCCAGAGGTCGGTCATTTAATACTAAAAATGGATGTTGTTTTGAGGGTCAGATCAGAACCTAGAGAACTTTTCCACAACAGGTGTTTCATCCCAACAGCCACAGTGTAGGATAAAAGGAGTGTTATATAGGGACCCCTTGATTAAAAGCTGTTTAGAGTTATTTAGGTAGATAGCTATGAAAATGCTTTTGGAAATGTTTAAAAAAAAATTGACATTGTACCAAGAGAACAACTCTGATTCTGGAATCTCTGTTTGTCAAATCAAGCTCCTTTTAACATAGTTGATCCCTTTAACATAAAAAGCCATCTGTGGGATTAAAAGAAGAGTAAAATAATGGTACCTTAATATTCTCTTAGCCATTTAACTTTTAAAAACAGTAGTATTTTTAGCTCTAATATCTCATGAACTCAATATTCATTAATGTTCAGTAAAGTTGCCTGGAACATTTTTAATGTTTCCTTAAGGTTTTTGAATTACGTATAAATGGGAATTAAGCAGTCCTACACTACAGGGTAGATATGGTAAATATTATATTTGTATATTTAGAATTACCAAAACAAATGTACTTTTACCTTTTATTTCTAACCCTGTGTTAGAGCAATTGCATGCTCTCCTGCTTTCTCTTTAAATCACACTGTTAAGCTGTGGATTTTGTACTCAGTGATTACTTAGGATAAACATTTTTTTTCATTCATTACATATTAGACATTTTTCTTTTTGTTGTAAGAAGATTCATCTTAGTCAATAAAACAGCTTTTTAAATCCCACAGGTCAGTTATGTCTCACTAGTCTGAATGGCTTCACTCTTTCTCAGTATTAGAAATTATAGTCAAAGTGAATTTACTATATGTGAAGGAGAAAGCCAGTATTTCATTTTAGCAGCCAGTAGTTTTCAGAACGGTGCTTTGAACGGTTTGGCCTCTCCAAAACAGACACACGTAGTTCCCACCCATACATGGCTTATATTCCAAAGGTTTTTAGTCAACTTTTGGGACTCGGGGCACATTTTTCCACAGGAACAGTAGTAATTAGGTTCCCTGTGAACACTCCCATAGAGAGCTCACCCAGGAACCTAATCCACTTAACCATGAATGTACTGAACTTGTAATGTGGTTGACAAATTACGAGTAGTAGACCCTGACCAGCATTTGTAACATCACTCTGCACTAAGGAAATGGTGTGTAGCAGCCAGACTTAGACATTGGGGTGCCTCTCTGTCTTGTGTGCCTCTGTCCCTAGGTGTAGGCTGCGTAAGGAGAAGACTCAGCGTGGGGTGGAGGGTGTGGCAAATGCACGATTATCGAAACCTGGTTATACCTGTTACAGAAGCATGCCACTTTGTTAAAGTGAAAACAAAACTTGTATATTGACTTATTTTTTAGCATCTTGACCTTATTTATGAGCTACTAAAGTGGTGACTTATTCAAAATACATTTTTGTTTTCCATTTAATACTAATTTATAAACTATGTACTCCTGGGAAGATTTGAAACCTACTAGAAGTTTGTTGAAATATTTTCACCATTTAAGAAAGACTTCTGGTTTAGATACTGATTTTAATGCCAGTATCTGCTCTAAATATTTATTATAAAAATGCATTATTTTTTTTAAAGAGCTTGATGCAATTTGTGGTAAGTGATTGTACTCAACCTGAATCCTACCCCCGGTTTTCCCCTTTGACCAAGTCTTCACAAGCTTTCAGTTGTTGGTTAATTCACTGACCATGAACACAAATGATATGGTCTGCTTTAGAAGTCTTGATAGTTAATGTGGTAAGCCTTAGCAGTAAATAGCCTTCCTTTTTAAAAGGGGGACTAAAATTTCTCAAGAAACTTTAGCTGGGTTAGCTGGGGGTACTCTAATACCAAATTCTAAATCATGAACATTTTCTTCACTGTGTACGTGAGGCAAATCATGCATTTTGAGTGCAGCTTGGCCTGGCCCCTCAAGAGAAAAGCATGTCACCATACTTGCAGTAGGCATATTTGGTTTGAATGGATACCATCACTCTTTTCTCCACAAACAGTGCAGAGAGCTGTCTGGAGTGGCAATTTGAACAGATTCCCTGGTGTTCCCTCTGCTCCTTCTATCAATACAGTAAGTAAAAGAACCACATGGGGGAGCCTGGGAGTCTGGGAAAATCAGCTGTGCTCAATAGCCAACCTCCCCTTCTAGGAAAACCAGTCCAGGTGCAGCTATTTTGGTACCTCATCTCACATGCACTCTGAATCAGGGTTTTTCTATAAGAACTCTTTCAGGATCAGCAAAAGCTGAGATGACCTGGTCATCTTGATTTGCAAAATTAAAACCAGGTTGTTGGTTGTCATTGTAGATGAGCAACTCATCTATTATTATTGAACTGTTCTGAGAAATCTTCAGAAAGAAAGCTCTCAAAAGTACAAATTAATTAGGAAAGTTAGACTGTCCTTTCTGAATTTTCCATTCAAAAAATTTATATGAAATAAAGCTACTAAACTGCTTTGTATTCTATTAAGAAGTAGCTTCTAAGTGGCAGTCTTAATAGTTGTTACACTGTATCACAGCTTTTTAAAGTGTAAACTCAGTTCTTCTCTGTATAGAAAGGGAGCATTGTGTTACTTACTGAATTTATTTATACAGAGCGTTTGTTGCTATCTGTAATTCCAGCCATCCACACGAGTCTGTTCTGAGGTGGCAGTAGCACATGGGAAGATGAAGTCTCCCTGTTTCTTTACCCCCTTTTCTTTGCTTGTATCTGATGACAATATAAGATGTTCTTAATAAAGTTTTACGTTCTTTTTGAGAT EMBV3_14535 GACTGAAGTGGCTGAGTCGTGGTGTAGTCATAAGGCAGTTTTTGGAAATGGTGGAAGAAA Gene GeneID:539614|NMUR1:XM_002685648:375_cdna Constitutive 0 NULL GeneID:539614 2 GENE NMUR1 NULL neuromedin U receptor 1 EMBV3_06476 GCTGATGATGAGTATGCCAGAGAGGAAGAATTGGCATTGATGGGAGCACAGATACCAAGC Gene GeneID:523251|HDX:XM_002699960:30_cdna Constitutive 0 NULL GeneID:523251 X GENE HDX NULL highly divergent homeobox EMBV3_42292 AGGGAGATCCTCAAATTCAAAGAGCGTGTACTGCCACCCCCTCCGTGTACCTGCTCTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30947 TGACCTACCTATCGTTTCCTGACCCTCGCTGACGCCGTCTCTCCTTCGAATACCCTGGAT Gene BVV0102_364942 + 0 NULL GK000023.2:44988909-45020473 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41172 ATTAGTGCCAGGCCACAACAAGGCTTTTCTCTCCCCTGAGCCTCCCAGCTTTGTTACCAA Gene BVT0102_054968 - 1 EMBV3_17721 GK000016.2:42713219-42719366 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069219 TCONS_00069218 TCONS_00069220 TCONS_00069216 TCONS_00069217 1 XLOC_041893 Coding TCONS_00069220 XLOC_041893 Coding Coding CLCN6 16:42716891-42750170 j TSS51655 4860 1 TCONS_00069220_7 668 0.0279835390946502 20 0.854558567221588 0.000285513243642708 0.0003266480206415 0.000325576690601981 1.30302020009715e-05 5.13063121251541e-05 6.10796393702172e-05 0.00014212426737191 2.30976223931751e-21 4.04561850661193e-05 2.50264920363689e-05 1.12579198176584e-39 1.47048140324917e-05 1.42541256504459e-22 3.59137367365653e-47 5.8327296643126e-12 4.69840631255012e-19 0.000194672391843149 0.000685339720488358 0.000112665812919328 8.72556969526595e-13 0.000158174893493094 0.000133532518683169 0.000209393128740587 1.42325372642119e-15 0.000380618652131842 3.04137856121238e-11 2.59369743210263e-07 6.32173073253671e-05 2.68529972475965e-25 0.000517085598280078 XM_005216965.1 CLCN6 PREDICTED: Bos taurus chloride channel 6 (CLCN6), transcript 0.0 8230 100.00 0.938683127572016 NM_001286.3 CLCN6 Homo sapiens chloride channel, voltage-sensitive 6 (CLCN6), 0.0 3092 80.55 0.688271604938272 TCONS_00069220_7 sp|P51797|CLCN6_HUMAN CLCN6_HUMAN Chloride transport protein 6; 0.0 1293 96.11 0.998502994011976 2 coding 0 0 0 0 -0.095313203587663 0.465086672490888 -0.0294480774783462 0.604817373719841 GTGGCAGTAAAGGAGGAAGATGGCGGGATGCAGGGGGTCCCTGTGCTGCTGCTGCAGGTGGTGTTGCTGCTGCGGTGACCGTGAGACCCGCACCCCGGAGGAGCTGACCATCCTTGGAGAAACACAGGAGGAGGAGGATGAGATCCTTCCAAGGAAAGACTATGAGAGTTTGGATTATGATCGCTGTATCAATGACCCTTATCTGGAAGTTTTGGAGACTATGGATAATAAGAAAGGTCGCAAGTATGAGGCAGTCAAGTGGATGATGGTGTTTGCCATTGGAGTCTGCACCGGTCTGGGCTCTTTGTGGGGAAGGAAGGCCCCATGATCCACAGTGGAGCAGTGGTGGGGGCTGGCCTCCCACAGTTTCAGAGCATCTCCTTACGAAAGATCCAGTTTAACTTTCCCTATTTTCGAAGTGACAGAGACAAGCGGGACTTTGTATCAGCAGGGGCAGCTGCCGGAGTTGCTGCGGCTTTTGGGGCCCCCATTGGGGGCACCCTGTTCAGTCTGGAGGAGGGTTCGTCCTTCTGGAACCAAGGGCTCACATGGAGAGTGCTCTTCTGCTCCATGTCTGCCACCTTCACCCTCAATTTCTTTCGTTCTGGAATTCAGTTTGGAAGTTGGGGTTCCTTCCAGCTCCCTGGGCTGCTGAACTTCGGCGAGTTTAAGTGCTCTGACTCTGATAAAAAATGTCATCTCTGGACAGCTATGGACTTGGGTTTCTTCATCGCGATGGGGGTCATTGGGGGCCTCCTGGGAGCCACGTTCAACTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGAAACGTGCACCCGAAACCTAAGCTCGTCAGAGTCTTGGAGAGCCTCCTGGTGACCCTGGTGACCACCGTGGTGGTGTTTGTGGCCTCCATGGTGTTGGGAGAATGCCGCCAGGTGACTTCTGCGGCTCAAGTCGGGAATGACTCCATCCCGCTCCAGGTCACATCAGAAGATGTGAATTCAAGTATCAAGACCTTTTTTTGTCCCAACGAGACCTACAATGACATGGCCACCCTCTTCTTCAATCCCCAGGAGTCTGCCATCCTTCAGCTTTTCCACCAGGATAGTACATTTAGCCCCGTCACTTTGGCCTTGTTCTTCGTCCTCTATTTCTCACTTGCGTGTTGGACTTACGGCATTTCTGTTCCAAGTGGCCTTTTCGTGCCTTCTCTGCTGTGTGGAGCTGCTTTTGGACGTTTAGTTGCCAATGTCCTCAAAAGCTACATTGGATTGGGCCATATCTACTCCGGGACCTTTGCCTTGATTGGTGCTGCGGCTTTCTTGGGTGGGGTCGTCCGCATGACCATCAGTCTCACGGTCATCTTGATTGAGTCTACCAACGAGATCACTTATGGTCTTCCCATTATGATCACCCTGATGGTGGCCAAATGGACAGGGGACTTTTTCAATAAAGGCATTTATGACATCCACGTGGGCCTGCGCGGCGTGCCGCTGCTAGAATGGGAGACAGAGGTGGAAATGGACAAACTGCGAGCCAGCGACATCATGGAGCCCAATCTGACCTACGTCTACCCGCACACCCGCATCCAGTCCCTGGTCAGCATCCTACGCACCACCGTCCACCACGCCTTCCCGGTGGTCACAGAGAACCGGGGCAACGAGAGGGAGTTCATGAAGGGCAACCAGCTCATCAGTAACAACATCAAATTCAAGAAGTCCAGCATCCTCACCCGCGCCGGCGAGCAGCGCCGGCGAAGCCAGTCCATGAAGTCCTACCCATCCAGTGAGCTGCGCAACATGTGCGATGAGCATGTGACCTCTGAGGAGCCAGGCGAGAAGGAGGATCTCCTGCAGCAGATGCTGGAGCGGAGATACACCCCCTACCCCAACCTATACCCTGACCAGTCCCCGAGCGAAGACTGGACCATGGAGGAACGCTTCCGCCCGCTGACCTTCCACGGCCTGATCCTGCGCTCGCAGCTCGTCACCCTGCTCGTCCGAGGAGTCTGTTACTCTGAAAGCCAGTCGAGTGCCAGCCAGCCACGCCTCTCCTACGCCGAGATGGCTGAGGATTACCCGAGGTACCCCGACATCCACGACCTGGACCTGACCCTGCTGAACCCGCGCATGATTGTGGACGTCACCCCATACATGAACCCCGCACCCTTCACTGTTTCGCCCAACACCCACGTCTCCCAAGTGTTCAACCTGTTCAGGACGATGGGCCTGCGGCATCTGCCAGTGGTAAATGCGGTGGGCGAGATCGTGGGGGTCATCACACGACACAACCTGACGCACGAGTTTCTGCAGGCCCGGCTGCGGCAGCACTACCAGACCCTCTGACAGCGGGCTCAGGCTCAGCCTCACAGCCGCGTGCCGGCTGCCCTCTCCGGAAGCCGCCTTGGAGGGCAGCAGCTCGGGCTCCGCCACCACGGCTGGCCAGACTGTTCCCGGGCACGGAAGATCCCCAGTCACCCACTCGCTTGGAAAGCCTACAGTCATCGAACACTTTGCCGTCAGAGATCCTGGGGGTGGTATGGGACCATCAGAGCCTGGATTTGTCTCACTGCTCAGCAAGTATCTTCCCGTTTTCTGCTTCCTGCGTTCCTCCATCCAGTGCCGACCTAGGCCCCAGCCCCTGTCCCTGCTAGCACCAGGACCAGAGGAGAGTCAGGCCTTGCCCGCTGGAGGGTGACCCTCAGAGCAGGTGTCCCGCCTCCTCTTTGCCACTTTCCTAGGGAAGCCAGCTGTTGCCTTAAAGCATCATGGGAAGGGCTTTGGCCAAGGCAAACACGGGTTGGGGGAGATATGCCAGTTGCGGAACTCAGTGAATGAGGAATTGGGCCCTGAGAAAACCACCCATGTTTCAGAGAGCACCCCCCCCCCCAACTCATTGAGACTCAAGTTGACACCTTCACTAGTTCATTTTAAGGGAAGTTCTTCTGGGTGTGAGGTGGGGCCCTGTGGTGTGAACCTCCTTGGAACCACCAGCTCCAGAAGCACAAAGCGTTTAAATCCTGCTCGTGGTCCCTGAACTTTATGATAAAGCTGATGACAGGGTCAGATTTCCACCTGTCCCAGCTTTGAGCATTTCGGCTTTCTCTCTAATTTCCTGATTACCCATGGTCTCCTTGTGCTGTCTTTTCACCTCGGTCCTTCTCCTCTCCATCAGATTACTAAACTTCCTCAAGTTCTACCTGCCTTTTCGTGGTGAAGCAGCCACAGCCCAGAGGACCTTGCATCACCCCTAAAAGCAGGGCTCCCTTAGATAAAACTGCTTCACTTGACCCTGGGGAACAGTGCCATTATTCATAAGACGGGAGGGAGTGAATCCTGAACCAGGAATGTGGGCGGGTCCGTGATGTGGCTGAGAAAGCCCGAGTGTGACCGCACAGCAGGTGTTCATTCGAGGAAGAGGGTGTCTGCCCTTCATAAGCATCTCACACTCGCCTGCTGCCAGCCGTCCCCACCCTCCTGAGGGGCTCAGCAGCGGCAACCTCAGGAAGGGTTAATGGGTAGTGGGAGGTGCTTCCTGCCAGCTCACACCCCAAGGTTTTAGCGTCAGACATAGGAAGCCTCCCTCTCTGTTTCTGTGACTCAGTTTCCCTCTCGGCTGTTTGGTCATCTCTGAACAGGCACCCAGAATGAGCATCTGTGTGTCAAGCATTTGCACTTACTTTCCTCTTTGTTCTCTCTACATTCAGCAGCATGTTTTTTTCTTTTTTAAATTGGAAGACAATTGCTTTATAATGTTGTATTGGTCTCTGCTGTATTAACAGCTTGGATCAGTCATAATTATATACATATACACACAGCCCCCTCTCTGGAGCCTCCCTCCCTCCCATCCCTTTAGACAGCCCCACAGCAAATGTGCTTGAAGACTCAAGATGGCATCTGTTTGCATTTAGTTAGTTCCCGTTTTTTTTTTTTCTTTAATCATGGAAGTTGCCAGAGGGCATTAGTGCCAGGCCACAGCAAGGCTTTTCTCTCCCCTGAGCCTCCCAGCTTTGTTGCCAAGACTGCTGTTCAGCCTGGGGATGAGTACCCACCCTGCTTTGCCAGCTCTGGTCTTGTGCTCCACGCACTCTAGGGAACAACACCCGCACCCAAGGGCTGTTTCCACATTGTCCCCAGTGACTAGGGCCCCTCTGTTCTTCCCTTTTTCTCATCTCTTTGATCAACATGACTTTGATATATAAATTTTTTGACTCCCTTGGGTGCACTTGACTTATGAAACACAGATGAACATTCCAGTAAGTAATTGAGGAACTCACCAGGAACAAAAGAGCAAGCCCTCCTAAGTGTGATGGTGTTCAGCCAGCTGCCACTGTTCTCAGGCAGCATCCAGAACTGGAACCTGCTCCCCTCTTGCTGCCTTTCTCCCCTTCCTGAAATTGGCAGGACTGAGGTCCTCCCACCTTCAGGGGGCGGGGTCATACAGCTGTCTGGGAGGCTGCCCTGGGTGAGTGTTGCTGGAATTTATCCTTCCCGCACACCATGTTGTGTTTAAGTCACCTGATATTTTGTTCCCATCGGTGCAGCCCAGAGATAGATGGCAGAATGCAGACACCTCCCTCCCCCTGAACAGATGCATCAGACCCAAACCCAGCCCCTCTGGAATGGCACGTCATTGTCCTCTCCTGGCGTCTGCCCTTTCCAGACAAGCCCAAAGACTAGCACAGCTCCACTTGTAACACAATTAACTGTCAGCCTCATTCCTTTGATTTCTGTTAGTTAGAAACCTGCATTTCAACATCTTGCCTGTTTGCAGCACGGTCACCTCCCAGGGATGTGGCCTCAATAGATTCTCAGGGGCCAAGCTTGGGATTGGCTAGAGGTGGTGTCATGTTCCCCAGCTGAGGTGTCAGGGGA EMBV3_25442 GGCTAAGCATTTGGTATTCAACCCTTCTCATAGATCCAGTAGCATCCTGCCACGGGGACT Gene GeneID:535254|POGZ:NM_001163190:130_cdna UTR3_Alt 3 NULL GeneID:535254 3 GENE POGZ NULL pogo transposable element with ZNF domain EMBV3_23878 CCTCTAAAACTTTACCCTTCCCCTTCACGCTGCTGAGTGTCCTTGTGGTCCATCCCTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04454 CTCAAGCAAAGAAGAGTTGAGCACAATCAGGTGGGAGAAAAAACAGAGGAAAGAAGAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21900 TCCAAGGATGAGGACTACTTAGGAAAGGTTGGAATGTTGAATGGAGGCCGTCGAATTGAC Gene GeneID:508557|SEC23IP:XM_002698540:35_cdna Constitutive 0 NULL GeneID:508557 26 GENE SEC23IP NULL SEC23 interacting protein EMBV3_09622 GCCTGGCGTCTACAATCCAGTCTAGCGCATGGGGTCAAACGACCAAGAACAAGCACCGCT Gene BVV0102_233656 - 1 EMBV3_38591 GK000019.2:22431567-22432981 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095731 TCONS_00095730 TCONS_00092694 TCONS_00095729 TCONS_00092693 TCONS_00095728 TCONS_00092689 TCONS_00095727 TCONS_00092691 TCONS_00092688 TCONS_00092696 TCONS_00092692 TCONS_00092699 TCONS_00092695 2 XLOC_057781 XLOC_056957 Coding TCONS_00092688 XLOC_056957 Coding Coding ABR 19:22347419-22433043 j TSS69689 6710 1 TCONS_00092688_7 822 22 0.921890146339185 0.00120193741039032 0.000819590532699052 0.00090291351876161 0.000346903050365917 0.000844945936449588 6.31198778460491e-05 0.000581088924988329 0.000202684815923285 0.000790743433523122 0.000197139826496482 2.94382172725687e-05 0.000182452173430895 1.59096071002312e-05 0.000246899709346905 5.68109567081622e-36 0.00260705442527787 0.000548002842679395 5.57408621581137e-08 0.000226985240506709 2.45461595507467e-15 9.95098605882236e-05 0.000874703370241148 0.000280991823270178 4.38372695502846e-05 0.000620697036538178 0.000517444568214264 0.000107416176967275 5.10569405618362e-05 1.25904674914577e-08 2.39618250541617e-12 XM_005220105.1 ABR PREDICTED: Bos taurus active BCR-related gene (ABR), transcript 0.0 9436 100.00 0.779582712369598 NM_001092.4 ABR Homo sapiens active BCR-related (ABR), transcript variant 2, mRNA. 0.0 4854 81.21 0.752906110283159 TCONS_00092688_7 sp|A6QNS3|ABR_BOVIN ABR_BOVIN Active breakpoint cluster region-related protein; 0.0 1609 98.49 0.963503649635037 4 coding 1 0 1 0 0.0299756486607904 0.849618692219714 -0.0185086664855859 0.738256552159725 AGGGCCGGGAGCCGGCGGCCCGAGAAGGTTCATAATGGACCCTTTCATCGGCAGCCGGTGGCCCGGCGCCAGGACGGACTCCGGGGAGGCCCGCGTGCTGGTGTAGGCCTGCCCCGCGCGCTCTTCCCGTCCCCGCCGGCCCGCCCCGCTCCCTCCCGGGCGCCGGCGGCCACGGCTGCTGCCGTTGCTGCCGCCGGGACCCCGCTTCCTGTTTGCCCTCCGCGGCTCCGGCTGCCATGGAAGAGGAAGAGGAGGCGATAGGCTTTTTGGACAAGGTCCTGGAGGATGAAGATGTGTTTCTGCTGGAGGAGTGCGAGCTGGGAACCCCGACCAGCCCCAGCTCAGGGTCCCCCTTCTTGGTGACTGTGAAGGTGGAAGCAGGGAAGGGCCTGGAGATGAGGAAGCTGGTTCTCTCGGGGTTCCTGGCCAGTGAAGAGATCTATATTAACCAGCTGGAAGCTCTGTTGCTGCCCATGAAACCTCTGAAGGCCACTGCCACCACCTCCCAGCCCGTACTCACCATCCAGCAGATCGAGACCATCTTCTACAAGATCCAGGACATTTACGAGATCCACAAGGAGTTCTATGACAACCTCTGCCCCAAGGTGCAACAGTGGGACAGCCAGGTCACTATGGGCCACCTCTTCCAAAAGCTGGCCAGCCAGCTTGGTGTGTACAAAGCATTTGTGGATAACTATAAAGTCGCTCTGGAGACAGCTGAGAAGTGCAGCCAGTCCAACAACCAGTTCCAGAAGATCTCCGAGGAACTCAAGGTGAAAGGTCCCAAGGACTCCAGGGACAGCCACACGTCAGTCACTATGGAAGCTCTGCTCTACAAGCCCATTGACCGAGTCACCAGGAGCACCCTGGTCCTACACGACCTGCTGAAGCACACACCTGTGGACCACCCAGACTACCCGCTGCTACAGGATGCCCTCCGCATCTCCCAGAACTTCCTGTCCAGCATCAACGAGGACATCGACCCCCGCCGGACTGCAGTCACAACCCCCAAGGGGGAGACGCGGCAACTGGTGAAGGACGGCTTCCTAGTGGAAGTGTCAGAGGGCTCCCGGAAACTGCGGCACGTCTTCCTCTTCACCGACGTCCTCCTGTGCGCCAAGCTAAAGAAGACATCAGCGGGGAAGCACCAGCAGTATGACTGCAAATGGTACATCCCCCTGGCTGACCTAGTGTTTCCATCCCCTGAGGAGTCTGAAGCCAGTCCCCAGGTGCACCCCTTCCCAGACCACGAGCTGGAGGACATGAAAATGAAGATCTCTGCCCTTAAGAGTGAGATCCAGAAGGAGAAAGCCAACAAAGGACAGAGCCGGGCCATCGAACGCCTGAAGAAGAAGATGTTTGAGAATGAGTTCTTACTGCTGCTCAATTCCCCCACAATCCCGTTTCGGATCCACAATCGGAATGGAAAGAGCTACCTGTTCCTACTGTCCTCAGACTATGAGAGGTCAGAGTGGAGAGAAGCGATTCAGAAACTGCAGAAGAAAGATCTTCAGGCCTTTGTCCTGAGCTCGGTGGAGCTCCAGGTGCTCACAGGATCCTGTTTCAAACTTAGGACTGTACACAACATTCCTGTCACCAGCAATAAAGACGACGACGAGTCTCCAGGGCTCTATGGCTTCCTCCATGTCATCGTCCATTCTGCCAAGGGGTTTAAGCAGTCAGCCAACCTGTACTGTACCCTGGAGGTGGATTCCTTTGGCTACTTTGTCAGCAAAGCCAAAACCAGGGTGTTCCGGGACACAACAGAGCCCAAGTGGGACGAGGAGTTCGAGATTGAGCTGGAGGGCTCTCAGTCCCTAAGGATCCTGTGCTATGAGAAGTGCTATGACAAGACCAAGGTCAACAAGGACAACAATGAGATCGTGGATAAGATCATGGGCAAAGGGCAGATTCAGCTGGATCCACAAACTGTAGAAACCAAGAACTGGCACACCGATGTGATTGAGATGAATGGGATCAAAGTGGAATTCTCCATGAAATTCACTAGCCGAGACATGAGCCTGAAGAGGACCCCCTCCAAAAAGCAGAGCGGCGTCTTCGGTGTGAAGATCAGCGTGGTGACCAAGCGGGAGCGCTCCAAGGTGCCCTACATCGTGCGGCAGTGTGTGGAGGAGGTGGAGAAGCGGGGCATCGAGGAAGTTGGCATCTACCGGATATCAGGGGTGGCCACAGACATCCAGGCGCTGAAGGCCGTCTTTGATGCCAATAACAAGGACATCCTGCTGATGCTGAGCGACATGGACATCAATGCCATTGCCGGCACCCTCAAGCTCTACTTCCGGGAGCTGCCCGAGCCCCTCCTCACAGACCGACTGTATCCCGCCTTCATGGAGGGCATCGCCCTGTCAGATCCTGCTGCCAAGGAGAACTGCATGATGCATCTGCTCCGCTCCCTGCCCGACCCCAACCTCATCACCTTCCTATTCCTGCTGGAACACTTGAAAAGGGTTGCTGAGAAGGAGCCCGTCAACAAAATGTCCCTTCACAACCTGGCTACCGTGTTTGGCCCCACGTTACTGAGACCCTCGGAAGTGGAGAGCAAAGCACACCTCACATCGGCTGCCGACATCTGGTCTCACGATGTCATGGCGCAGGTCCAGGTCCTCCTCTACTACCTGCAGCATCCTCCCATCTCCTTCGCAGAACTGAAGCGGAACACACTGTACTTCTCCACTGACGTGTAGCCCGAGGTGGGAGCGGCTGTGGGAGGGCAGCTCCGAGCCAGCCTCTCCAGCCAGGGACCCAACCCAGACTTGAAGGACTGCAATAGAGAACTCCCAAACCCAGCGCTCCACACTCCAAGGGACACAGATTTCCAAGAACTGGAAGACGTGTATCTTTTGTGCCACCTTGTACAAAGCCAGCCGACCCGGCCCCGGCCCCGCCACGCACCCCGGCTCTGCCCTCCGTTCCTCTAGTCGTGTCTAATGCTCCGTGCTGTTCGGGAATTGTTTTATGTCTATTTGTCATGCAGAAAAGGTAGTGGCCGACCCGGTGTGGGCACACAGGCAGCCTGCTTTGTTCTTTGATTTCCTCCAACACTTTCTTTCCTCCTGAGTCCGGTCCAAAGGCTTTTATTTTGCGCTCTGTAACTGCTGCCAGCTTCGCCTCTCTTGGCCCTGCTCCCAGATCGCAGTCTCCTGGCGGCCTCCCCTCGGTCTTCCTCTGCCCCATCCTTCCCCCCCCGCCCCCCCCAAGCCTGCCTGCATGCATTTGCAGCTTTGGTTTTTGACCCATCACCTCGAAAGTTCTGAGGCGGCCCTGGGCAGCGGTGGCGGGGGGCGGCCGGTCCGATGCTGCCGCCCCCCACCTGTGGAGGCGCGCCTGTCCGCCTTGCTGCCTGTGCAAATGTTGGACAAGGAGACAGACTTGCACTGATCCTCGGCTCAGCACAGGCTGGAGAGCAGATTGCTGGGATTTTTTCCACCTGAGAACCTCCGTTTCTGGGGTGTGTCTGTTCTGTCTCCAATCCCCGTGAGGCGCCTTTGACTGTTTCTTCTTCTGCTTTTCAGTTTTTCTCCTGCTGTTCTATTTTGAGTGTAGAGACTCACCAGAGACCTGCTGTCAAGGCAGCTAGAGGGTCAGGAAAGAATCGGGGGAGGTGGGAGAGTCAGGTTGCCAAGGAGACAGAGCAAGTGGGCTGTTGAGAGGAGTGCCAGGGAGTGCTGGGCATCCTGGGCTGGGAGCAAGGAGTTGTCATGGCGGCTTTTCTGGTGGAGCCAGGCTTCTGGGAGGGCAACCACGAGGGCTGAAGCAGACGTCTCGAAACAGGCAGGCTCCGTCCGAGAGGGCTAGCCCTTCCTGGTGCCTCCCATACCTCGTGGTACCTTTGCCTTAGACGTTACACACTCCACAGCCAAGCACTGCCATGGGGCAGCCCCCACGGCCACGTGCGCCCCAGGGCCTGGGAAAGTCAGGCGCGGTCCAGCAGTAGCCAGCCGTCATGGTGCTGCCTCCTGCCCCTGGCTTCTGAACGCAGCCTGGTGGGTGAACTCGGGGGAACTCTAGGAGTTGGGGTGTGCCAGGTACCTGCCTGTCTCGGGACTGGGTTTTGCAGGGGACCCTGGTGGTGGATGCTCGACTCATCCGCAGGGTCCTATCCCCATGTTGAGGGCCGCTGCTCAGTACTGGAAAGGAGAGAGAAGCGCCTGCAATGTGCAGTTTCTTCTCTCCTGAGCAGCGCTGCCAGCCTCCAGCAGTTCACCTGGGAGGAGACAGCCCTGGCAGCAGGGGCTGGAGCTACAGGACAGGGCTCCCTGGCTCTCCTGAGACTAGATTCCAAGCCCTGGGGGTTGGGGAGAAGAGCTCCCCATAGCTTGAGCTCAGGGCGGTTTTAAAGAAGGGTTTGGGGCCCTGAAGCCTTAGTACCGGCTCAGTGAAAGGAAGGCCCCGTTCTTGTCTCGTTTACACCTGTGGCCCCGGCGTGGGCAGAACGGTACACATTCTGTGAACATCGGAGGATAGATGCCCAAGAGGAGAGAGGTACTGACGCCCTGGCTGCCTGCTAAGCAGCTGAGCGAGGAGCCCCACTCCCTAAGATGAAGGGCTTGAGCCACAGGTGGAGAAAGAATGCTGCAGTCTGAACATCCCCCATGTCTGACCATCCCTGGAGCCTGCTCGACACTCGGGAGCCGGCAGGTGGCCTGGAAGGTTCTTGCTTCCACGGCTACTAACTGGAATGAATTGGAGCCCCACCTAGAGCTATTTACAGCCCCTAACAGGTGCCTCCCACCTTCAGCGTCAGGTAGCTACTGCAGCCCCCCAACCTCTTAGGTGATGAGAATGGGAGGAAGGCTGGAAGGGCTGAGAAATGGGAAAGGCTCAGCATATTTATCAACGACCCCCAGAACCAGGAGGGGTGGGTACCAGACCTGGACTAAGCTGCGCTGAGGAACAGCCCATGGGTTCTCCTGAGCGACAGGGACTGTACAGAATCCCAGCCATTGTGCCCAGCAGGGCAGGCTGTGCCGACAGGAGCCCACAGACAGGCTACAAGAATCCACACACCTGTCCTTGCTGGCGATGGCTGCGGGCTGCCGGTGTTGTGCTGTTACAGGTATGATGGGACCCTTCATTAATATTTGACTTTCATAAGTTGGTAAGGATATATTTTTCTTTGGTCTATGTTCTGTTTCAACTTATGTAGATTATTATAAATTGATGTAAGCCACGTGAGAGGAAAATGTTAATAAAAAAAAAAAAAACCTGCAAAGCCCTGATATTTGCACACAACTCAGCCCTGCGGTGTGGACGTTTGTGTTCCCGGGAGTCCAGGGAAGATCACCAATCTAAATATTTAACTCTTCCAGCTGCATCCAGATGTGAGTTTCCAAGAATCTCCTTACTAGTGAATTCCCCCTGGTGCGTCCCTTCGGCCTGTGGGGACCATGGCAGTTTGGGAGATGAGCCCACGCCCTCGCCTTGCTCTTTCACAAATGCCCGCAGCTGTCACCAGCCAGTTCTTTTCATGAAAATACAAATGCCCCACCAGAGACCTGGCCATCAATATGCCTCAGAGATGGCAGGAAGTTGTCTATTCAAGTGGAGTTTATTTTATGCAAACATCTCTACAATTTCCTTGGAAATTGCAGGTCTTTGGGGCAGCCTGCTGGCCTAATCTCTGTTGGGGAGGCTGGATCCTCTAGAGGTCCCAGCCTCCCTCAGGAGAGCTAGCGGGGTTAATGTCGGCTCCCACCAGCCTCAGCCATTGGACACTGTGTTTATTCTGGAGATTGGGAACAGATGTCTCTGAAAATTGGTGTTTGGTTTATGAGCTCATACTGCCTCCTTAGCCATCTAAAACAGGAAACTATTCATCTCCTCTCCTGACTGAATAGTCAGAGTGGACAATGCTTGGCTTATTGAACTGACGGCTACTGACAGCCCAGGACTCGTCATTCCCAAGGCAGCCTCGAGGGCAGCGGTGCTTGTTCTTGGTCGTTTGACCCCATGCGCTAGACTGGATTGTAGACGCCAGGCTTCTGGCACTGCTGACAGGTGGCAGGTAAGAGTGTCTGCGCTTGCTCTAACTGCTTACAGGTGCCTTGTTTAGGGACAGTGGAGGACCCACTCCAACATTTGTTCTCAGACCTGTGAGGATTCTCCAGGCAGCCTAGCAGCAGTGAAGCCTCTTGACCGAGACTGGGACAGGCATTCTATAGAACTACTCCACCTCCTCCCCCTGAGAAGGGCACGAGCCTTGTGCACTAGCTCATGCTCATTCCAAAGGCAACAGCAGACAAGGCCAGAGGAAGGTGTTACCAGCTGGGCTTGACATCATCACTCATGTACACACACACACACACACACACACTCAGGATGTCTAGATGGTTCAGCTGAGTCTGAGTTCTGGTTAAGGTTTAGAAGACAGCCCACAGTGGGGGAGACAGCCAAAAAAGGCACAGGAATGACTCTATGGGATAAAGGAGACAAGACCACTGGCTGCAGGCGGCTGGAATTACAGGCCCCCACCGTGCTCCCTGCTGGTCTTAAGTTCATCTTCACCCCACCACCAAGGCACCAGAGCAACGCAGCATCTGCAGCAGGTCCCGATTGTAAAAGGGCGTTTTTTTTGTGTATAGCACACAATTAGGCTGAGCTGCTACTGTCAGAGAAAGGCTACCAGGTCAAGTCAAAAACACCAATGTTTAAGTAAGGAACAAACCCCTGACATCAGAGGAACAGGGTGC EMBV3_36077 CACATATGGTGTATGCTTGGGATTCTGAACAGTCCTTTTGGCTGTACCAATTGTCAGGAG Gene BVT0102_160355 + 0 NULL GK000016.2:55974107-56000361 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30254 GTTCGCATGCATGTGTGAAGGAAAAGGCTCTGATCTTGAACTAATCCTGCATAGGTATCC Gene GeneID:533337|TMEM35:NM_001014940:20_cdna Constitutive 1 NULL GeneID:533337 X GENE TMEM35 MGC139742 transmembrane protein 35 EMBV3_39475 TTGACTCTTCTCGCTTAACTACGTCGGCGGAGACAATCTTTTAAGAACAGTTGCTACTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32184 GGTAGGAGAGCGTTTACTAGCCCGACAATGGAAGCGTTTACCAGCCACTTTCCACAGCTA Gene BVV0102_016893 + 0 NULL GK000009.2:9608713-9699646 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29165 CTGCTCAGCCTATCAGACAGTTATCACCAGGACATCATTTCAGTTTCCGTCTCTCAGCTC Gene GeneID:507559|B4GALT7:NM_001075321:17_cdna Constitutive 0 NULL GeneID:507559 7 GENE B4GALT7 MGC140582 xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) EMBV3_28282 TACCGTTTTTTGTACTTGATGCCTTCTCTGTGAGCAGTGGCTCTGTTGGAAGGAGGGAGC Gene GeneID:511966|C2CD2L:NM_001105358:107_cdna Constitutive 0 NULL GeneID:511966 15 GENE C2CD2L TMEM24 C2CD2-like EMBV3_25513 AGCAGGCTCAGTTTACAAACCTGTGAGCTACTGTTGGCTGCTGCCCTCCTTCCCAATGAA Gene GeneID:783807|LOC783807:XR_084534:589_cdna Constitutive 0 NULL GeneID:783807 5 PSEUDO LOC783807 NULL similar to Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding protein MBD6) EMBV3_35373 CCAGGCAGTTTCCCACTTACAGGGGAAGGCTTTGCCTAGAGATCAAATTTCCATGGATAG Gene BVT0102_280224 + 1 EMBV3_12902 GK000026.2:16919270-16954142 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37186 AGTCTAGTATGGCTGCGGATCCCTGGCCTGGGTTTTCTATCAGATGATCCATCGTAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35741 AAAATAACTAATGTATGTGAGAACGGGGCTGGCCGACGGGGTGTTGGGTCAGTGGGGAAA Gene GeneID:618617|LOC618617:XM_002696168:130_cdna Constitutive 0 NULL GeneID:618617 19 GENE LOC618617 NULL similar to Family with sequence similarity 100, member B EMBV3_33203 TTTTAATCTCCAGTTAGCTACTGGCATCTTTACATTTGTTACACATTGGACTTTGTACAG Gene GeneID:538713|TTC30A:NM_001099091:35_cdna Constitutive 0 NULL GeneID:538713 2 GENE TTC30A TTC30B tetratricopeptide repeat domain 30A EMBV3_28917 TGAGTTGCTAAAGTGAGCCTGGCTTTAGAGGTGCCCCCTGAAAAGTGCCGCTGTGCAGTG Variant GeneID:535455|TEX264:NM_001038169:244_cdna 211^661 2 EMBV3_13958 GeneID:535455 22 GENE TEX264 MGC134080 testis expressed 264 EMBV3_14207 CGCCTTATTTCCCCCTGAAACTTTTTTGTTCGTGTGGCAGGGAGCAGTAGACAATTACGG Gene GeneID:523661|CTNND2:XM_002696428:41_cdna UTR3_Alt 2 NULL GeneID:523661 20 GENE CTNND2 NULL catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) EMBV3_29867 TCCCCTGAGCTCTGCCCTCGGATGTTCCACCGCCCCTCCTCCCTCGGGACCTGTTGTCCC Variant GeneID:506163|MOSPD3:NM_001034265:98_cdna 105^186 4 EMBV3_05423 GeneID:506163 25 GENE MOSPD3 MGC127964 motile sperm domain containing 3 EMBV3_01957 GCACTGGAGCTATACTGACATCACTGATGGGATGCTTTTTTGAAAATCATTCGAAATGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42150 CTCAGGCCGGACAGAAGGCTTCAGCTGCTTTTTCGTCTGTTGGCTCTGTCATCACCAAAA Gene GeneID:540235|TPD52:NM_001076922:58_cdna UTR3_Alt 2 NULL GeneID:540235 14 GENE TPD52 NULL tumor protein D52 EMBV3_26637 TTCCTGCTCATACTTTCCACCCCTCCAACTTACTGGTGAATTTCGGTGAGCTTTGACTTC Gene BVV0102_034986 + 0 NULL GK000007.2:17265338-17279884 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31182 ATGCCTTAGGATGACAAACACCTTACCCGTATACTCTGGCCCCAGGTTAAAGACTCGGGG Gene GeneID:281937|MYO1C:NM_174396:25_cdna Constitutive 0 NULL GeneID:281937 19 GENE MYO1C NULL myosin IC EMBV3_13121 GCTCTCAGGAGCCGCGGCCCGGGGCAGTGGGGGCCGCAAATAATGGAGCCTTTCACCAAT Gene BVV0102_452979 + 1 EMBV3_06115 GK000007.2:98767731-98824637 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214702 TCONS_00214704 TCONS_00214701 TCONS_00214703 1 XLOC_130750 Coding TCONS_00214702 XLOC_130750 Coding Coding LNPEP 7:98783792-98867218 j TSS160525 2592 1 TCONS_00214702_3 806 14 0.969097992208571 0.00460019288523366 0.00158613402235426 0.00137949870056776 0.00260528912125468 0.00248867812275121 0.00174699739591516 0.00276096398694973 0.00321743979582507 0.00325156804688886 6.07369024755191e-21 0.000106832116968618 4.2892846029818e-05 0.000343452244976494 0.000874628466714702 0.00100481657881618 0.000256511708555271 1.27757151186863e-09 2.63276820201138e-08 0.00192320555869772 0.00240982997975401 0.00104590170418976 1.66583978034992e-38 5.51490913899254e-33 6.09794926141814e-80 0.000438235635569067 0.000831387655414093 0.00371265193793412 4.72236180890308e-14 4.03377533420955e-05 6.98359024295445e-15 XM_599899.4 LNPEP PREDICTED: Bos taurus leucyl/cystinyl aminopeptidase (LNPEP), 0.0 4488 100.00 0.959490740740741 NM_005575.2 LNPEP Homo sapiens leucyl/cystinyl aminopeptidase (LNPEP), transcript 0.0 3119 87.27 0.978009259259259 TCONS_00214702_3 sp|Q9UIQ6|LCAP_HUMAN LCAP_HUMAN Leucyl-cystinyl aminopeptidase; 0.0 1437 86.25 0.991315136476427 3 coding 1 0 1 1 0.0884819627557318 0.716145836865562 0.0415086071898079 0.380435538959695 GGCGGATCCCAGAGAGGGCGGAGGGGCGCCGCCCCTCGCGGCACCTCCCCGGCAGCCCTGGGCGCCGCGCCGGGCATGCTCAGTGCGCAGGGCCGCTCGGAGCTCTCGGAGGAGGAAGCTCGCGCGCTCCCGCTCTCAGGAGCCGCGGCCCGGGGCAGTGGGGGCCGCAAATAATGGAGCCTTTCACCAATGATCGGCTTCAGCTCCCCAGGAATATGATTGAAAACAGCATGTTTGAGGAAGAACCAGATGTGGTGGATTTAGCCAAAGAGCCCTGTTTACATCCTCTGGAGCCTGACGAGGTGGAGTACGAGCCCCGGGGCTCACGACTGCTGGTGCGGGGCCTCGGCGAGCATGAGCTGGATGAGGATGAAGAGGACTACGAGTCGTCTGCGAAGCTTCTGGGCATGTCCTTCATGAACAGGAGCTCGGGCCTCCGAAACAGCGCGGCCGGCTACCGGCAGAACTCGGACGGGACTTGCCCGGCGCCCTCTGCCAGGACCATAGGGGTCTGTGTTTGCATCATCCTACTTGCTGTTGCTATAATCCTGGCGATTTACTTCCTGCCCAGGTGTACCTTTACCAAAGAAGGCTGCCATAAAAACAACCGACCCACGGAACCGATTCAGCCCATCGCAACAAATGGAAAGTTGTTTCCGTGGGCCCAAATCAGGCTGCCCACTGCCGTTACGCCAGTGCGCTATGACCTGACCCTCCACCCAAACCTCACCTCGATGACGTTCAGGGGTTCTGTGACGATTTCGCTTCAGGCCCTTCAGGCCACGTGGAACATCATTCTTCACAGCACAGGCCACAACATTTCCAGAGTGACTTTTATGACCGCAGTTTCAAGCCAGGAAAAAGAAGTTGACGTCCTGGAGTACCCACTGCATGAACAAATCGCCATTGTTGCCCCCGAGACCCTGCTTGAAGGGCACAATTATACCTTGAAGATCGAGTATTCGGCAAACATATCTAGTTCTTACTATGGCTTTTATGGCATCTCCTACAGAGACGAAAGTAATGAGAAAAAGTACTTTGCAGCAACTCAGTTTGAACCCTTGGCAGCAAGATCTGCTTTTCCTTGTTTTGATGAACCAGCATTTAAAGCCACATTTGTCATCAGGATCAAAAGAGATGAGCAATACACTGCTTTATCAAATATGCCTAAGAAGTCATCAGTTGTGCTGGAAGACGGACTTGTTCAGGATGAGTTTTTTGAGAGCGTGAAGATGAGCACCTACCTGGTTGCTTTCATCGTGGGCGAGATGAAGAATCTGAGTCAGGATGTAAACGGAACCCTGGTTTCTATATATGCTGTCCCAGAAAAGATTGGTCAAGTTCAGCATGCCTTGGAAACAACTGTGAAGCTTCTTGACTTTTATCAAAGCTACTTTGAAATTCAGTACCCACTAAAGAAATTGGACTTGGTGGCTATTCCTGACTTTGAAGCAGGAGCAATGGAAAACTGGGGTTTGCTCACCTTCCGAGAAGAGACACTTCTGTATGATGCTAATACTTCTTCAGTGGCAGATAGAAAGCTGGTTACTAAAGTCATCGCTCACGAGCTGGCCCATCAGTGGTTTGGTAATCTGGTAACAATGCAGTGGTGGAATGATGTATGGCTAAATGAAGGTTTTGCTACATTCATGGAGTATTTCTCTTTGGAAAAAATATTCGGAGAGCTCTCCAGTTATGAAGATTTCTTAGATGCTCGATTTAAAACCATGAAAAAAGATTCGTTGAATTCATCCCATCCAATATCATCATCATCTGTTGAGTCTTCAGAACAGATTGAAGAAATGTTTGATTCTCTTTCCTATTTTAAGGGAGCTTCCCTACTGTTGATGCTGAAAACTTACCTTAGTGAAGATATATTTCAACATGCCATTATTCTTTACCTGCATAATCATAGCTATACATCCATTCACAGTGATGACCTGTGGGATAGTTTTAACGAGTTCACAAACAAAACACTAGATGTAAAGAAAATGATGAGAACCTGGACCCTGCAGAAAGGATTTCCTTTAGTGACTGTTCAGAGAAAAGGAAAACAAATTCTGGTACAACAGGAAAGATTCTGTTTGAATGTTAAGCCTGAAATTCAGCCTTCAGATGCAAGCTCTCTGTGGCATATTCCACTATCCTACATCACTGATGGAAAAAATTACTCAAAGCATCGATCAGTATCTTTATTGGACAAGAAATCAGGTGTCATCAATCTCACAGAAGAAGTGCAGTGGATCAAGGTCAACACCAACATGACTGGCTATTACATTGTCCATTACGCAGATGACAACTGGGAAGCGCTGATCAAACAGCTGAAAATAAATCCTTATGTGCTGAGCGACAAAGATCGAGCCAACCTCATCAACAACATCTTTGAACTTGCAGGCCTAGGCAAGGTGTCTCTTCAGAGAGCTTTCGATCTGATTGATTATCTTAGAAATGAGACCTACACTGCACCCATCTCTGAAGCCCTGTTCCAGACAGAACTCATCTATAACCTCCTTGACAAACTCGGGCACGTGGATCTGGCCTCAAGACTGGTGCAGCAGATTTCTACCCTCATTAACACAGATGAGGAGACTG EMBV3_02081 GACAAGGAGCCTGATATAGAGATGCAAGTTGAGAATTTGGAGCTACCGGTTAATCCCTCC Gene GeneID:407134|5htr2c:XM_002699902:151_cdna Constitutive 0 NULL GeneID:407134 X GENE 5htr2c NULL 5-hydroxytryptamine 2C receptor EMBV3_05434 TCAGAAGGAACCAACCCTGCCAACACCTGGATCTCTGCCTTCTAGCCTCCAGAACTGTAA Gene BVV0102_181541 + 1 EMBV3_37447 GK000030.2:34112800-34207610 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13638 GAACTAAAGAGCCTGAAGGCCAGGGGTCTCCAAATAGAGGAAATAGCCTGCAAGTGTCAG Gene BVV0102_172783 + 0 NULL GK000013.2:43538234-43605578 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048544 1 XLOC_028676 NonCoding TCONS_00048544 XLOC_028676 NonCoding NonCoding - 13:43570521-43571416 - TSS35720 895 2 TCONS_00048544_1 45 0.593296089385475 1 0 0 0 0 9.2783809285163e-06 0.000182041418838457 0 3.58373383800546e-05 0 0 7.08734891549199e-06 4.04975314610756e-06 4.43909068103124e-07 0 1.21468520647771e-05 0 0.000129084687697398 0.000123997575266065 6.84843567658467e-05 0 4.01756148542097e-06 3.08352053701558e-07 7.30880775620879e-05 7.91960575808055e-05 6.25565458656046e-05 0 7.87203906269534e-06 6.54654363264736e-06 2.81843365570075e-05 1.45160131650148e-05 3.24950035212652e-05 XM_005212209.1 C10H14orf1 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf1 (C10H14orf1), transcript variant X1, mRNA. 3e-101 372 91.29 0.293854748603352 0 noncoding 0 0 0 0 -0.469385810838145 0.234645864116365 0.0457678804931329 0.378449069842075 GTTTGGGGTAAAGGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAAAAAGGCATAGGTTATCTCTAGACTCGAGAATAGCTAACTTCAGGCAAAGCCGGGTGTCATTATGGCAACACAATATTTTAAGAGAAACCTCCCTTTAAATTTGTATAGAGACGGAAAAAATATTGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGGCTATTTCCTCTATTTGGAGACCCCTGGCCTTCAGGCTCTTTAGTTCTTCACTTTCGGCCATAAGGGTGATGTCATCTGCGTATCTGAGGTTATTGATATTTCTCTCAGCAGTCTGGATTCCAGCTTGTATTTCATCCAGCCCAGCGTTTCTCATGATGTACTCTGCATATAATTTAAATAAGCAGGGTGACAATATACAGCCTTGATGTACTCCTTTTCCTGTTTGGAACCAGTCTGTTGTTTAATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGATATCTCAGGAGGAGAAAAGCTGAGTGCAAAGTCCCTGGATGATGTCCCACAGCCAGCAGACCTGCCCAGTGGGAGGGATGCCAAGGAGTGATCAGACCTGAGCCAGAAGCTCAAGGCCAGTGTCAGCAGAGCGCAGGGCTGAGGCAGGTGCTGGGGGATGGCATGAAGACACAACTCAGTCAAGAACAGCCCTGACCCGGCTGTGGGTCCCAGGGAGAGTCAGCAAGCAGCTGGGAGCATCCGCCCACTTCAGGTCACAGGATCACAGCACTGGGTCCCCACTGCCCACCTGCCAAATCTGAAGTCTTTTTGCTGAAAAGATAATAACCATGCCCAACAGGCAATATAGTAAAAGTTGTACTCTTTTGACACAC TCONS_00045260 . 5' 12884 TCONS_00045260 . 5' 12884 EMBV3_41591 TTCCTACATCTTCATCCTCAATGCAGTCTTCCAGCTTCCCTCCCGAGGAGCTCTGCAAAA Gene GeneID:518464|LOC518464:XM_002693415:103_cdna Constitutive 0 NULL GeneID:518464 15 GENE LOC518464 NULL similar to olfactory receptor 549 EMBV3_35570 GGAGCCACCCTACTTTTGGCAGGAAAAGTCCAATTTGGTTATGTGTATGGCATGAGTGCC Gene GeneID:522186|YIPF7:NM_001103258:17_cdna UTR3_Alt 2 NULL GeneID:522186 6 GENE YIPF7 MGC155290 Yip1 domain family, member 7 EMBV3_19307 CACCGTCCGGGGCAGGGGGAGAAGGTATTTACGAGACAAAGCACTGGCACCACAAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39017 TGGACTGTGCAAAGGTTGGAAGTGGGTTTGCATTTCTAAAATGGTGACTTTTACTCCGCC Gene BVT0102_062205 + 0 NULL GK000010.2:51739158-51758866 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013965 TCONS_00013967 TCONS_00013962 TCONS_00013968 TCONS_00013961 TCONS_00013966 TCONS_00013964 1 XLOC_008225 Coding TCONS_00013968 XLOC_008225 Coding Coding ADAM10 10:51597854-51742443 j TSS10232 5695 2 TCONS_00013968_3 403 0.0100087796312555 15 0.960715965363654 1.39264789364546e-09 0.000824452236902568 2.01999202368478e-06 2.2414493187635e-07 0.00110478127906893 0.000558955932796815 0.00104971553065464 0.000930405656241754 0.0020551771840988 4.76632403196513e-05 2.97862256371611e-05 2.26893773514695e-09 1.55835222041487e-08 2.07129119929444e-09 0.000649554153596174 0.00246847423040811 0.000587852401262128 0.00970999712297972 4.07223019805162e-07 8.66528088233429e-16 5.83354288062741e-08 0.00152217967386246 0.00240914269224102 0.00629275818450624 9.96473886935374e-13 5.06723366283959e-09 3.82093736461999e-07 0.00041630102078859 1.4950448217485e-10 0.0004508942672758 NM_174496.2 ADAM10 Bos taurus ADAM metallopeptidase domain 10 (ADAM10), mRNA. 0.0 2140 99.75 0.209833187006146 XM_005254117.1 ADAM10 PREDICTED: Homo sapiens ADAM metallopeptidase domain 10 (ADAM10), 0.0 4372 89.99 0.571202809482002 TCONS_00013968_3 sp|Q10741|ADA10_BOVIN ADA10_BOVIN Disintegrin and metalloproteinase domain-containing protein 10; 0.0 822 100.00 0.970223325062035 5 coding 1 1 1 1 -0.185036016038033 0.472838946564708 -0.145637928718381 0.0448657099248935 GCGGGGAAGGGAGGAAGGAAACGAACGAGGGGGAGGGAGGTCCCTGTTTTGGAGGTGCTGGAAGCTTTGCCGGCTCTTGAAGTGGGGCGAGAGGGAGGTGCTTCGCCGTTTCTCCTGCCCGGGGAGGTCCCGGCTTCCCGTGGAGGCTCCGGACCAAGCCCCTTCAGCTTCTCCCTCCGGTTCGATGTGCTGCTGTTAACCCGTGAGGAGGCGGCGGCGGCGGCGGCAGCGGAAGATGGTGTTGCTGAGAGTGTTAATTCTGCTCCTCTCCTGGGTTGCGGGGCTGGGAGGTCAGTATGGAAATCCTTTAAATAAATACATTAGACATTATGAAGGATTATCATATGATGTGGATTCATTACACCAAAAACACCAGCGTGCCAAAAGAGCAGTATCACATGAGGACCAGTTTTTACGGCTAGATTTTCATGCTCATGGAAGACATTTCAACCTTCGAATGAAGAGGGATACTTCCCTTTTCAGTGAGGAGTTTAGGGTGGAAACATCAAATGCAGTACTGGATTATGATACTTCTCATATTTACACTGGACATATTTATGGTGAAGAAGGAAGTTTTAGCCATGGGTCTGTTATTGATGGAAGATTTGAAGGATTCATTCAGACTCATGGTGGCACATTTTATGTTGAACCAGCAGAGAGATATATTAAAGACCGAACTCTGCCATTTCACTCTGTCATTTATCATGAAGATGATATTAAGTATCCCCATAAATATGGTCCACAGGGGGGTTGTGCAGATCATTCAGTGTTTGAAAGAATGAGGAAGTACCAGATGACTGGTGTAGAAGAAGTAACACAGACACCTCAAGAAAAACATGCTATTAATGGTCCAGAACTCCTGAGGAAAAAACGTACAACTGTAGCTGAAAAAAATACCTGTCAGCTTTATATTCAGACTGATCATCTGTTCTTTAAATATTACGGAACACGAGAAGCTGTGATTGCCCAGATATCCAGTCATGTTAAAGCAATTGACACAATTTACCAGACAACAGACTTCTCTGGAATCCGTAACATCAGTTTCATGGTGAAACGCATAAGAATCAACACAACTGCTGATGAGAAGGACCCTACAAATCCATTCCGTTTTCCAAATATTGGTGTGGAGAAGTTTCTGGAGCTGAATTCTGAGCAGAATCATGATGACTACTGTTTGGCCTACGTTTTCACAGATCGAGATTTTGATGATGGTGTCCTTGGTCTGGCGTGGGTTGGAGCACCTTCAGGAAGCTCTGGAGGAATATGTGAAAAAAGTAAGCTCTATTCAGATGGTAAGAAGAAGTCTTTAAACACTGGAATTATTACTGTTCAGAACTATGGGTCTCACGTACCCCCCAAAGTCTCTCACATTACGTTTGCTCATGAAGTTGGACATAACTTTGGATCTCCGAATCTGGCCAACCTATTTGTGGAAATGGGATGGTAGAACAAGGTGAAGAATGTGATTGTGGTTATAGTGACCAGTGTAAAGACGAGTGCTGCTACGATGCAAATCAGCCGGAGGGGAAAAAATGCAAGCTGAAACCTGGAAAGCAGTGCAGTCCAAGTCAAGGTCCCTGTTGTACAGCACATTGTGCATTCAAGTCAAAAACTGAAAAGTGTCGGGATGATTCAGACTGTGCAAAAGAAGGAATATGTAATGGCATCACAGCTCTCTGCCCAGCCTCTGATCCTAAACCGAACTTCACAGACTGTAATAGACATACGCAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATCTGTGAGAAACATGGCTTGGAGGAGTGTACCTGTGCCAGTTCTGATGGCAAAGATGATAAGGAATTATGCCATGTCTGCTGTATGAAGAAGATGGAGCCATCAACTTGTGCCAGTACAGGGTCTGTGCAGTGGAACAAGTACTTCCTTGGTCGAACTATCACCCTGCAACCTGGATCCCCATGCAATGATTTTAGAGGCTACTGTGATGTTTTCATGCGGTGCAGATTAGTAGATGCTGATGGTCCTCTAGCGAGGCTTAAAAAAGCAATTTTCAGTCCAGAGCTCTATGAAAACATAGCTGAATGGATTGTGGCTTACTGGTGGGCAGTATTACTTATGGGAATTGCCCTGATCATGTTAATGGCTGGTTTTATTAAGATATGCAGTGTACACACTCCAAGTAGTAATCCAAAGTTGCCTCCTCCTAAACCTCTTCCAGGCACTTTAAAGAGGAGAAGACCTCCCCAGCCCATTCAACAGCCCCAGCGTCAGAGGCCCCGGGAGAGTTATCAGATGGGACACATGAGACGTTAACTCAGCTTTTGCCTTGGTTCTTCCTAGTGCCTACAATGGGAAAACTTCACTCCAAAGAGAAACCTATTAAATCATCATCCCTAAATGAAACCCTCACAAATAACAGTAGAAGAAAAAAAATGGCAAGAGATCATTTCCTCAGATCAGGTGGAATTACTTAAATTTTAAAGCCTGAAAATTCCAATTTGGGGGTGGGATGTGAAAAAAAAAGAAACCCCATTTTCTTATAGACAGATATTTTTAACCTAATGGCACAAAGTCTTAGAATATTATTATGTGCCCCGTGTTCCCTGTTCTTCGTTGCTGCATTTTCTTCACTTGCAGGCAAACTTGGCTCTCGATAAACTTTTATCACAAATTTAAATATATATATATTTTTTTCAACTGCCAATCAAGGCTAGGAGGCTCGACCACCTCAACATTGGAGACATCACTTGCCAATGTACATACCTTGTTATATGCAGACATGTTATTTCTTACGTACACTGTACTTCTGTGTGCAATTGTAAACAGAAATTGCAATATGGATGTTTCTTTGTATTATAAAATTTTTTCCGCTCTTAATGAAAAATTACTGTTAATTGACATACTCAGGATAACAGAGAATGGTGGTATTCAGTGGTCCAGGATTCTGTCATGCTTTACATGGGCAGTTATGAGAAGAGAATCAGTTTACCTTTTCCTCATGATGGAGTTGGTTCTGATATTCATTTTGTTTTATCAAATGGCTGCTAAGAGCACAGGATTGACGACGCTGAAGAACACAGTTAAGTGTTGTGAAAACTGGACATATGCAGCATACTACTACTTCAGACTTAGTTCTTTATGTAAATGTCTGATTTCTGCTTACTTATTTTAAACTTTCTAATTCAATTCCATTTTTGAATTGATAGGTGAAATTTTTATTCATGTTGGTAGCAGTTAGGTCAATGAAATGATTCTTTTTATTTGCAGCCTCTTATTTGTATGTTAATTATGTTTTGGGTTTTGTCCGATATGGAAAAGAAAAGCTGTGTGTCTGTTTTATCAAGATATTTGAACAGAGTTTTCAGCATATCATGATCATTGGTAACCACTAAAGAGGAGTGATTTGCTCAACTAGTAGTTAAAATTGTAGATAGGCCTTCCGACACTTTTTTTCCCTAAGATATTTTATCAGCAATGAAGGTGAAACAGCACAATGTCCCATTCCAAATTTATTTTTTAAACAGGTGTAAATAATTGGCTTTTTAAAGAAAGAAGTCAAAAGCGTTTAATGTATTAACAGGCTTATTGCTATGCAGGAATGGAAGGGGGCATTACAAAAAAAACTTTAAGCTTGTGACATATTTATTGCTTGTTTTCCAACTACATCATGTTAAATTAGAAGTAAACAGCTATGATTTTCCTGGCTTCACATAGGAGGCAAATTTAGGCAAAGTTGAAATGATTTGTGTTTGGCTTTTTTTTTTTCCTTTTTTTCTTAAGAGTATAAGGTTTACACAATCATTCTCATAATGTGACGCAAGCCAGCAAGGCCAAAAATGCTAGAGAAAATAATGGGATCTCTTCCTTGTAAACTTGTACAGTATGTGGTGACTTTTTTCAAAATACAGCTTTTTGTACATGATTTAGAGACAAATTTTGTACATGAAACCCCAGATAGACTATAAATAATTCTAAACAAACAAGTAGGTAGGTATGTATGTAATTGCTTTTAAATCATTTAAATGCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGGTTTGCATTTCTAAAATGGTGACTTTTACTCCGCCAGAGTTCTTAGTAACTTCTTGAGTGTGCTAGACTTTGAACATGTACATTTTTTGCTTGAAATGTTATCCTGTGGTAGGGTTTTGGCAGGTGTACAACTGCCCTATTTTATTTTGAGTCTAAGTTAAATGTTTTCTGAAAAGAGATACGTGCACTGAACTCTCTCCACTCCAAATCAAGATGTGGTAAAACAAGAGGATCGAGACAAGTGAGATCTAATACTACTGTCAGTTTAATGTCCACTGTGTTTTATACAGTATCCTTTTGTTCACTTTGGAAATTTTTACTAAAAATTGCAAAAAATAAAGTATTGTGCAAAGATGTAAGGTTTTTTGAAACTTGAAATGCATTAATAAATAGACTTGATGAAATCAACTTGAAGGTTTCATACTCTTTGAACTTTGAGAACTATCAAAAGAAGCGTCCCGCAAGGCCGCCTTTCCTTCCTAAATGAAAGAGATGGTTAAGCAGAAAGGGAATTGCCTCTTCCCACACAAGTATAGATATCTTTATTCTTAGTTAGGACTCCATGTAAAAATTTTTGTGATTAGATCTCTTTCTATACACAGTGAACATTTGAAAAACATTTAACTAATCTTAACTGCTTTGCATTGTTTCTAATCAGTATTCAGAGTGCCTAAACGTGTCTTAGTGGAAGAGCTGAGTCATTTTGGAAACTGTGGTCTTATATATTTTTTCCAAAGTTTTGAATGCTAAATACTTCATTTATTTTAAAAGTTGAGTTTGATGTTAAGTGTGTTTTAAAAATTTGAGCCATGTTTTCCTGCTTTGTCAAATTCATAGCACGTAAGAAGACTTGACATTTCAGCCTTCCTAGAAAAAGAATTGTAAGCCTGGAATAGTGCCCTGCACAGAATAATCTACCCCAAACACAACTTATTTTTTTAATATATTGAGGCCAGTTTAAATAAGTAGTATTTGTTAAGTGAGTAAAAACATGCAATACTTTTTACTTTAATTCAGAAACCTCAAAATATGTATTATGTTTAATTATGTTTATTAAACTATCAATATTAACTCGGATGATTACAAGTTTACTGTTTTTACTTACAACTGCATATTTAAATTTTGTTTAGATTAAATCAGCAATGGAATAAATTATTACACTTTCTGGACTAGTGCCCTTTATAGTGTCAGAAAATATACAGTTTGGGGAGGGACTTCTTTATGGGAATGGCAGCTTTATCTGATCAGTCTTGTTTTCTGAGGTGTTTTCAGCAGTTTTTGCTTTGGGTACTTTGTTTTTGTTATATTACAGACTAGTGAAAACTGAAGATTTCTCCAAACTGAGCAAACCACTCTCAAGTTCTTATATTTGTCCCTGTGGTCTGTACATTTTAAGACCTAAGGATTATTATTTCTCCAAAGGTGGGATTAGTGTCCATGGCAGCTGTGCAATTACGGGTTCTTGTTCTTGGAAAGGGTTTTAATTTCCTAAGTATTTATAATCGAAAGTATAAGAGGGTCAATTTAGTAAGTCCATTATAAAACTGGACAGCCCGTCTTCAGGGGTTTAGGAAATGATGTTCCTTATCCAGATGGGGAGGGAGGAGGGAGGAGGGTTCAGGATGGGGAGCACACGTATACCTGTGATGG EMBV3_02374 AGTGCCGACGCCGCTGCTTTCCATCAAGGCAGAAAAGAGGAACAGAATAGACATTTTGGA Gene GeneID:510926|TMEM119:NM_001083664:120_cdna Constitutive 0 NULL GeneID:510926 17 GENE TMEM119 NULL transmembrane protein 119 EMBV3_29369 TGTTCCAGATGGTGGAAAACAATTAGGGAACTGATTACTGGCTGGATATGTCTCCCTCCT Gene BVT0102_186769 + 0 NULL GK000030.2:39332193-39350110 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00153219 TCONS_00063037 TCONS_00185807 TCONS_00240878 TCONS_00250197 TCONS_00252056 TCONS_00055302 TCONS_00124845 TCONS_00223462 TCONS_00115687 TCONS_00124584 TCONS_00056728 TCONS_00210177 TCONS_00135701 TCONS_00142124 TCONS_00165813 TCONS_00206539 TCONS_00186108 TCONS_00148465 TCONS_00006827 TCONS_00136848 TCONS_00175865 TCONS_00189890 TCONS_00022065 TCONS_00198816 TCONS_00250881 TCONS_00020016 TCONS_00201733 TCONS_00175818 TCONS_00031911 TCONS_00066285 TCONS_00019263 TCONS_00175545 TCONS_00249780 TCONS_00040583 TCONS_00137302 TCONS_00208127 TCONS_00117484 TCONS_00116666 TCONS_00251706 TCONS_00065249 TCONS_00021596 TCONS_00032143 TCONS_00039853 TCONS_00242007 TCONS_00249989 TCONS_00152628 TCONS_00177280 TCONS_00072815 TCONS_00071079 TCONS_00189806 TCONS_00206861 TCONS_00199595 TCONS_00250580 TCONS_00033746 TCONS_00070810 TCONS_00207359 TCONS_00218553 TCONS_00063487 TCONS_00253665 TCONS_00007555 TCONS_00125001 TCONS_00048558 TCONS_00020010 65 XLOC_006139 XLOC_092984 XLOC_037764 XLOC_111860 XLOC_147542 XLOC_153140 XLOC_154997 XLOC_033110 XLOC_076388 XLOC_136762 XLOC_069856 XLOC_076128 XLOC_034531 XLOC_128687 XLOC_081924 XLOC_086549 XLOC_100653 XLOC_125061 XLOC_112161 XLOC_090345 XLOC_002389 XLOC_083059 XLOC_105644 XLOC_115927 XLOC_012736 XLOC_120469 XLOC_153824 XLOC_010694 XLOC_123378 XLOC_105597 XLOC_018156 XLOC_040999 XLOC_009943 XLOC_105326 XLOC_152723 XLOC_024399 XLOC_083512 XLOC_126640 XLOC_071650 XLOC_070832 XLOC_154647 XLOC_039971 XLOC_012269 XLOC_018386 XLOC_023670 XLOC_148671 XLOC_152932 XLOC_092393 XLOC_107054 XLOC_044583 XLOC_042852 XLOC_115843 XLOC_125381 XLOC_121248 XLOC_153523 XLOC_019979 XLOC_042587 XLOC_125876 XLOC_131873 XLOC_038214 XLOC_156604 XLOC_003116 XLOC_076544 XLOC_028690 XLOC_010688 Coding TCONS_00063487 XLOC_038214 NonCoding NonCoding - 15:19911470-19912752 - TSS47230 1282 1 TCONS_00063487_1 67 0.999219968798752 1 0 0.000127936029395653 9.17062658717937e-05 8.18314929850691e-05 5.31053848615394e-05 3.83862007692534e-05 4.14504082240342e-05 3.66155071199037e-05 9.3342542597709e-05 0.000142868560875806 0.000182105794932418 0.000115314176713717 0.000592086251997118 4.72528536473549e-05 0.000140849193612007 0.000199068739116394 0.0049393326901842 0.0017848333210037 0.00508423071029997 8.89727488761304e-05 7.85121412812907e-05 3.66359677067345e-05 0.00142164529096076 0.0028077711046913 0.00202140642150578 8.09897640299424e-05 8.93525617697323e-05 6.91146032189968e-05 0.000537406910919829 0.000427515932212117 0.000608492059792261 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 6e-49 199 69.48 0.399375975039002 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 TAACATCATATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTGTGTGTTCCAGACAGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATAAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGTACCACACAAGGGCCAATAAGCTCCAGAGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGACAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATTTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAA TCONS_00058453 . 3' 291441 TCONS_00058453 . 3' 292722 EMBV3_09655 CTTCCCTATGGGCATTTCTTCCTGACTTCTCCAGATGGTCTACATCCATTAAAACAGCAG Gene BVV0101_038499 - 1 EMBV3_21722 GK000016.2:65940678-65994214 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069956 1 XLOC_042104 Coding TCONS_00069956 XLOC_042104 Coding Coding - 16:65989208-65990014 - TSS52057 712 1 TCONS_00069956_2 126 2 0.118012422360248 0 0 0 0 0 0 0.000180193247330985 0 0 0.000109796815079619 0 0 0 6.60673549954321e-05 0 0 0 0.000740040569983816 0 0 0 0 0 0 0 0 0 0 0 0 XR_228132.1 LOC101910034 PREDICTED: Bos taurus uncharacterized LOC101910034 (LOC101910034), 0.0 1043 100.00 0.810393258426966 0 coding 0 0 0 0 0.043610957366007 0.761001787225231 -0.000706622051337126 0.990330553035263 TGTTCCATGAACCCTTAACAAGTACTAATTTATTTTGATAATTAACCTACATATTCTGATTGTTTACAAATCTTGTGTACAATAGATGCTTCATAAATGTGTTTCTATTTTGATGAGAATGATTTGTCAATTGCAGTATTCAAGGACACAATGTATAGGAGCCCTTCTCTTCAGTACCACACCTCAGACGTGGAACTAAGTGATTCAATCAATGTGAATTTATTCATTCATTTCCAAGAAGGAGTCACTGAGCCTCCAGAACAGTCAGGAAGCATTGCAGTTCAAGATTTAAGAGAAGAAACTTCTGGTTTGGGAGACAGTGAGATGACAGTGGTAGTCAGAGCTTGCTCCCTCTCCTCCACTCCCCTAATAATTCCCAAAGGAAATCTTATTAATCTTCAGGAGTTTCTCTTAACTCCCAGTAAGAAAACACTTCTGGTAAAGAACTACACCTTAAAATCCTATCTGCTGTTTTAATGGATGTAGACCATCTGGAGAAGTCAGGAAGAAATGCCCATAGGGAAGACTGAAGACTATTAAATTAAAACCTTGGCCTCTTATACTTTATGTTGTCCAAAGGCCTTTGTGTTCATGGATTTCTTTACTACTCCAAGAACTGTACTACGGAAACCAGCATGGGGTCCCTAGTCTAAAATCAATGTATTTCATGTCAAAATATGTGGTATTACGCAGAAGCTGCCTTTTTTTTCCC TCONS_00068018 TCONS_00068019 r 5' 1770 TCONS_00068018 TCONS_00068019 r 5' 1464 EMBV3_39758 GTGGTGGGAATGCTCTACAACCCCTTCTCAGGTTACTGGCATTGGAGTGAAAACACTAGC Gene GeneID:540298|COQ3:NM_001076210:8_cdna Constitutive 3 NULL GeneID:540298 9 GENE COQ3 MGC127187 coenzyme Q3 homolog, methyltransferase (S. cerevisiae) EMBV3_36400 CATGAGTTTTTGTTATTGAGTTGCCTCTCAGAGATCCCTGGGGAAGCTGCCTTATTCCCT Gene GeneID:617512|CCNDBP1:NM_001046604:196_cdna Constitutive 2 NULL GeneID:617512 10 GENE CCNDBP1 MGC133757 cyclin D-type binding-protein 1 EMBV3_36355 GGAAACAGACAAATCCAAATAAAGTTCACTGTGACAGTGAGGGAGATGAAGAGGAGACCA Variant GeneID:532668|ZNF821:NM_001038152:333_cdna 416^541 1 EMBV3_16334 GeneID:532668 18 GENE ZNF821 MGC134567 zinc finger protein 821 EMBV3_08973 TGCTGCCATCCATGGTGTTGCTCCAGGACCTTCCTTCTAACATGGGATCTTCCCAACTCA Gene BVT0102_319740 + 0 NULL GK000007.2:85924687-86158699 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25406 CGCCTCTCTATCCCTTTTCCAGACTGCCTCACCAGCTGAAAGCACACAATGGAACAGTGT Gene BVT0102_319906 + 0 NULL GK000019.2:43162166-43186285 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100233 1 XLOC_060476 NonCoding TCONS_00100233 XLOC_060476 NonCoding NonCoding - 19:43164973-43165673 - TSS74609 700 1 TCONS_00100233_1 46 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000180313752622637 0 0 noncoding 0 0 0 0 -0.161142734447404 0.289643728617687 0.0366078843640064 0.454172544293509 ACTGTTCCATTGTGTGCTTTCAGCTGGTGAGGCAGTCTGGAAAAGGGATAGAGAGGCGGAAACAAACAACCCTTTGGCCCAGAAAAAGAACACCAGGATGCAACCCTGTCAGCAGCTGGAATCTCACAGCTCTCTCTTGTGTTCCTCTATCCATCCATCTGTTCAGCAAAGTGTGACTACTTGCCAGGAGCCAGCTACTGGGCTGGGGACTTCAAAAAAGCCCAGTCCCTCCTGTTAAGAAGCTCATAGGGTAGCAGGGATGACAGATGCATAAATAGTTTCTGATACAAAGTGGAAGGTGCTCCAGCAGCTCAGGGAAGGTTGTCCCCACTTCTGGGAGAGTACGAAAGGGTTTACAGGGTACCGTCTTCCATCCCTTTCCACCTCCGTCCTTTCTGCAGGGACATGAGGTGGGGGCTGGGGGAGTAGCCAGGCATTCTCTTATCAAAGTTCTGCCTTAAATCTTACCAGCTTACATTGAGGGAACACCAACGAGGTGTGAGGGGTGCAGCATGCAGTGTGTTCCCTTCCATTTTGGATACTTTCTGGAGAATCCTAGGGAGACAGTGTGCTTCGTTAATAATAAATGATTGGGATGAATGATGAATGATGTATCTTCATATCAGAGAAACCATCTCAAATGGAAAACAAGTCCTCAGCAGCTGGCTCACAGCTGCCACAGACAGCAGTAATGTGTTTC TCONS_00097082 . 5' 2511 TCONS_00097082 . 5' 2511 EMBV3_29266 AAGCCCCGGTGTTTTAGGGCCGTAGTCCTGGAATCTCAAATTATCCACCACAATGGGAGA Gene BVT0102_164258 + 1 EMBV3_27919 GK000005.2:108549603-108552852 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02981 ATCTGGGTGGCTTGGATGACCATGTACCTCTTTGGCAACGCTGAGCTACGACAGGGAGAT Gene GeneID:516334|GPRC5B:NM_001075741:341_cdna Constitutive 0 NULL GeneID:516334 25 GENE GPRC5B NULL G protein-coupled receptor, family C, group 5, member B EMBV3_24649 CATGCTGAACCTTCTTCATGAGATAAGAAAATTCTATATGAGCAAAGAATCCATGTCCGC Gene GeneID:510924|HERC3:NM_001083663:162_cdna Constitutive 0 NULL GeneID:510924 6 GENE HERC3 NULL hect domain and RLD 3 EMBV3_32444 GGTGGTGAAATACAGTCATCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAACAA Gene GeneID:100336466|LOC100336466:XM_002699304:282_cdna Constitutive 0 NULL GeneID:100336466 29 GENE LOC100336466 NULL HRASLS5 protein-like EMBV3_34939 CAGCTGGTGGCTGGTTCTTATCTCTGTGGCTGGGTCAGTTCCATCCTTCAAATCAGTGTA Gene GeneID:527216|LOC527216:XM_002687622:754_cdna Constitutive 0 NULL GeneID:527216 5 GENE LOC527216 NULL similar to olfactory receptor 827 EMBV3_28036 GAAGGCTATTACTACCGTCAGATCTTTGAAAACCACTACCCAGGCCGTGCCGACTGGCTG Gene GeneID:514209|ASNS:NM_001075653:42_cdna Constitutive 1 NULL GeneID:514209 4 GENE ASNS MGC138980 asparagine synthetase EMBV3_22958 AAGCTGAGGCTACTCCTCATTGCCATGCTCGGGCTTCTCATTGCAGTGGCTTCTCTTGTT Gene BVT0102_266423 - 1 EMBV3_14177 GK000014.2:65075315-65338358 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00057359 1 XLOC_035157 NonCoding TCONS_00057359 XLOC_035157 NonCoding NonCoding - 14:65130896-65131149 - TSS43036 253 0.956521739130435 1 0 0 0 0 0 0 0 0 7.01349367247924e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000602475128310194 0 0 0 0 0 XM_003582781.2 PUS10 PREDICTED: Bos taurus pseudouridylate synthase 10 (PUS10), partial 2e-34 149 73.86 0.857707509881423 0 noncoding 0 0 0 0 -1.04085638364128 0.0261460607344847 0.0123813188879559 0.788550174501436 ACTGAAATGGGGACTTCCTTGGTGGTACAGTGAATAGAAATCTGCTTGCTAATGCAGGGGACACAGATTCGATCTCTGGTCCGGGAAGATCCCACATCCTTGCAGCAACAAGAGCCTGTGTGCCCCAACTACTGAGCCTGTGCTCTAGAGCCTGCGCTCTGCAACAAGAGAAGCCACTGCAATGAGAAGCCCGAGCATGGCAATGAGGAGTAGCCTCAGCTTACTGCAACTAGGGAAAGCCTCAGTGCAGCAG TCONS_00053699 . 5' 53989 TCONS_00053699 . 5' 53989 EMBV3_31646 GCAGAAAACTTGTGCTCACTTTATGTAAATTAGGATTAGCTATAGGATGCCACAATGATT Gene GeneID:508575|G2E3:XM_002696694:67_cdna Constitutive 0 NULL GeneID:508575 21 GENE G2E3 MGC133923 G2/M-phase specific E3 ubiquitin ligase EMBV3_21253 CCCTGCCCTTTGCCTTTCCACAGATTATTTTCGGGGAGGTTTGTGTGTTCTCCTGTCTTC Gene BVV0102_255768 - 0 NULL GK000011.2:100484525-100538521 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39666 CCCTCCCCTTATTCTTGCCTTATACATTCCCTTCTACATGCCTGGTGACGTGTGGACATG Gene GeneID:100126827|BCAR4:NM_001111263:13_cdna Constitutive 0 NULL GeneID:100126827 25 GENE BCAR4 NULL breast cancer anti-estrogen resistance 4 EMBV3_24089 AGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGC Gene BVV0102_373485 + 0 NULL GK000019.2:52979858-53023435 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00152753 TCONS_00063037 TCONS_00230737 TCONS_00152743 TCONS_00218448 TCONS_00210177 TCONS_00117964 TCONS_00098386 TCONS_00232348 TCONS_00186108 TCONS_00110373 TCONS_00252934 TCONS_00124583 TCONS_00109859 TCONS_00251760 TCONS_00009883 TCONS_00199544 TCONS_00218891 TCONS_00175545 TCONS_00011804 TCONS_00040583 TCONS_00208127 TCONS_00251524 TCONS_00021596 TCONS_00234064 TCONS_00011198 TCONS_00207068 TCONS_00066192 TCONS_00089951 TCONS_00189806 TCONS_00206861 TCONS_00115736 TCONS_00130259 TCONS_00062743 TCONS_00007555 TCONS_00078479 TCONS_00063180 TCONS_00030202 TCONS_00111546 TCONS_00153219 TCONS_00185807 TCONS_00080733 TCONS_00252056 TCONS_00229410 TCONS_00007501 TCONS_00124845 TCONS_00107446 TCONS_00176254 TCONS_00141421 TCONS_00199062 TCONS_00209870 TCONS_00047865 TCONS_00006827 TCONS_00022065 TCONS_00142489 TCONS_00218865 TCONS_00197184 TCONS_00117619 TCONS_00071185 TCONS_00031911 TCONS_00119942 TCONS_00129415 TCONS_00222115 TCONS_00040860 TCONS_00233344 TCONS_00188225 TCONS_00221977 TCONS_00037791 TCONS_00250938 TCONS_00251546 TCONS_00046756 TCONS_00010780 TCONS_00223365 TCONS_00249570 TCONS_00209529 TCONS_00010588 TCONS_00218178 TCONS_00206678 TCONS_00156845 TCONS_00222010 TCONS_00218903 TCONS_00007432 TCONS_00115687 TCONS_00251705 TCONS_00109028 TCONS_00030297 TCONS_00177841 TCONS_00165813 TCONS_00209829 TCONS_00161792 TCONS_00153777 TCONS_00252354 TCONS_00023615 TCONS_00007360 TCONS_00057311 TCONS_00148453 TCONS_00135547 TCONS_00009945 TCONS_00251662 TCONS_00251930 TCONS_00073576 TCONS_00040195 TCONS_00218856 TCONS_00123618 TCONS_00019980 TCONS_00039853 TCONS_00238420 TCONS_00030295 TCONS_00187688 TCONS_00177280 TCONS_00148279 TCONS_00231613 TCONS_00239592 TCONS_00187057 TCONS_00039908 TCONS_00125001 TCONS_00229751 TCONS_00245928 TCONS_00080765 TCONS_00070957 TCONS_00088087 TCONS_00088868 TCONS_00056728 TCONS_00110644 TCONS_00206426 TCONS_00037933 TCONS_00006026 TCONS_00231487 TCONS_00251627 TCONS_00066279 TCONS_00179810 TCONS_00117681 TCONS_00219970 TCONS_00116955 TCONS_00056819 TCONS_00148295 TCONS_00007719 TCONS_00238326 TCONS_00038667 TCONS_00019198 TCONS_00156732 TCONS_00040178 TCONS_00040745 TCONS_00201770 TCONS_00185942 TCONS_00056147 TCONS_00088288 TCONS_00239418 TCONS_00190322 TCONS_00116101 TCONS_00070840 TCONS_00063487 TCONS_00071861 TCONS_00030941 TCONS_00123170 TCONS_00176255 TCONS_00124110 TCONS_00040698 158 XLOC_155966 XLOC_092518 XLOC_037764 XLOC_140227 XLOC_092508 XLOC_131768 XLOC_128687 XLOC_072130 XLOC_058632 XLOC_141833 XLOC_112161 XLOC_066277 XLOC_155875 XLOC_076127 XLOC_065763 XLOC_154701 XLOC_005436 XLOC_121197 XLOC_132210 XLOC_105326 XLOC_007354 XLOC_024399 XLOC_126640 XLOC_154465 XLOC_012269 XLOC_143543 XLOC_006749 XLOC_125587 XLOC_040909 XLOC_054732 XLOC_115843 XLOC_125381 XLOC_069905 XLOC_078970 XLOC_037470 XLOC_003116 XLOC_047367 XLOC_037907 XLOC_016457 XLOC_067446 XLOC_092984 XLOC_111860 XLOC_049617 XLOC_154997 XLOC_138905 XLOC_003062 XLOC_076388 XLOC_063356 XLOC_106033 XLOC_085849 XLOC_120715 XLOC_128381 XLOC_027997 XLOC_002389 XLOC_012736 XLOC_086914 XLOC_132184 XLOC_118846 XLOC_071785 XLOC_042957 XLOC_018156 XLOC_073015 XLOC_078128 XLOC_135424 XLOC_024674 XLOC_142826 XLOC_114268 XLOC_135286 XLOC_021620 XLOC_153881 XLOC_154487 XLOC_026895 XLOC_006331 XLOC_136665 XLOC_152513 XLOC_128040 XLOC_006139 XLOC_131641 XLOC_125199 XLOC_095305 XLOC_135319 XLOC_132222 XLOC_002993 XLOC_069856 XLOC_154646 XLOC_064933 XLOC_016551 XLOC_107614 XLOC_100653 XLOC_128340 XLOC_098677 XLOC_093539 XLOC_155295 XLOC_014282 XLOC_002921 XLOC_035110 XLOC_090333 XLOC_081770 XLOC_005497 XLOC_154603 XLOC_154871 XLOC_045340 XLOC_024012 XLOC_132175 XLOC_075170 XLOC_010658 XLOC_023670 XLOC_145087 XLOC_016549 XLOC_113733 XLOC_107054 XLOC_090161 XLOC_141101 XLOC_146258 XLOC_113105 XLOC_023725 XLOC_076544 XLOC_139245 XLOC_150855 XLOC_049649 XLOC_042734 XLOC_052874 XLOC_053654 XLOC_034531 XLOC_066546 XLOC_124948 XLOC_021762 XLOC_001589 XLOC_140976 XLOC_154568 XLOC_040993 XLOC_109580 XLOC_071847 XLOC_133287 XLOC_071121 XLOC_034622 XLOC_090177 XLOC_003279 XLOC_144993 XLOC_022490 XLOC_009878 XLOC_095192 XLOC_023995 XLOC_024559 XLOC_123415 XLOC_111995 XLOC_033950 XLOC_053075 XLOC_146084 XLOC_116357 XLOC_070270 XLOC_042617 XLOC_038214 XLOC_043631 XLOC_017192 XLOC_074724 XLOC_075662 XLOC_024514 Coding TCONS_00223365 XLOC_136665 NonCoding NonCoding - 7:99197616-99198194 - TSS167363 578 1 TCONS_00223365_1 46 0.998269896193772 1 0 0.000120648814424882 6.20409940898881e-05 5.51405551987913e-05 7.67844353482926e-05 2.53681650352793e-05 0.000349004910194905 6.67386467464298e-05 9.48956839952509e-05 0.000136259884344415 0.000309839721293351 0.000106745086248943 9.34329214631254e-05 5.07325207223975e-05 7.83485220371222e-05 0.000264162962598948 0.00439530801700214 0.00120968757694069 0.0042704637380745 3.04795312933588e-05 4.11579086485804e-05 7.71600047162288e-06 0.00131452670583257 0.00344702967144713 0.00588780578812554 6.32849547407575e-05 8.55096297502652e-05 7.47435494178299e-05 0.000452121394965465 0.000429115516678603 0.00059472107130323 XM_001250798.4 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant 2, mRNA. 2e-13 80.6 94.23 0.0882352941176471 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 ACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATGGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATTGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATGGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAG TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 EMBV3_38920 AGGGCCTCTCGAGTGCGGCAGATGTGGGGAAGTCTTTAGTCAAAGGTCTACTCTGATTGA Gene GeneID:528802|ZNF548:XM_002695487:232_cdna Constitutive 0 NULL GeneID:528802 18 GENE ZNF548 NULL zinc finger protein 548 EMBV3_25453 GGGAACACACAGCCTCACAAAATAAACTGTGGTTGTGATTGTAAGGTTCTTATGTCAGTG Gene BVT0101_018378 + 0 NULL GK000002.2:113287684-113372104 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106280 TCONS_00106282 TCONS_00106281 TCONS_00106283 1 XLOC_062761 Coding TCONS_00106283 XLOC_062761 Coding Coding CUL3 2:113368827-113487279 j TSS78256 6297 1 TCONS_00106283_2 702 0.0875019850722566 15 0.946965411858068 9.02892781115229e-05 5.45812032292308e-11 1.40102477922203e-05 0.000112701160241648 1.5501677745853e-05 8.19126659383876e-06 7.1784451910628e-05 1.6385764554404e-09 4.53570695672513e-06 3.56657415927382e-06 7.40654327249264e-06 2.51223190086891e-05 1.83394445409247e-12 1.19027712768995e-07 1.18589640212493e-05 0.00287891931610535 0.0044032585110291 0.00799803132484217 0.000230699459630648 1.89415146391898e-05 2.93115620854576e-05 0.00174579538451656 0.0010272467670653 0.0016786190889443 6.64575007498902e-08 4.89011964383995e-05 1.50283719949799e-08 0.000241584384546189 0.000406221598919735 3.72354105080438e-17 XM_005202940.1 CUL3 PREDICTED: Bos taurus cullin 3 (CUL3), transcript variant X1, mRNA. 0.0 9313 100.00 0.819914244878514 NM_001257197.1 CUL3 Homo sapiens cullin 3 (CUL3), transcript variant 2, mRNA. 0.0 6399 86.10 0.866285532793394 TCONS_00106283_2 sp|Q9JLV5|CUL3_MOUSE CUL3_MOUSE Cullin-3; 0.0 1413 99.71 0.967236467236467 2 coding 0 1 1 1 0.0165244988379991 0.908837669052861 0.0229944763047996 0.721345551193638 CCTGCGCAGTGAGATGTTTGTCCGTCGCCGCCGCCGCCGCCATCGCGGAGGAGCGCGATAAAGGGAGCCGAGCCGGGCGTGAGGGGGACCCCGCGGAGCCGCCGCGCCAGCGCAGTCCCCCAGCCGAGCCCGAGCCGCCGGATACCGAGCCGCCGCTGCCCCCGCCGCGGCCGCCCAGGGGCCGGCCAGCTCCCCAGCCCAGCCCGGGGGTCGCGCCGCCGCCGCCGCCCCCAGCGTCGCCCCTCGCCTGCCCGCCCGCCTTAAATGTGACACCGGCGCCTCGGAGTGCGACCCGAAGCCGCCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGGTGCGAGAAGATGTACTAAATTCATTGAATAACAACTTTCTTCAAACGCTAAATCAAGCTTGGAATGATCATCAGACAGCTATGGTGATGATTAGAGACATACTAATGTATATGGACCGTGTATATGTACAACAAAATAATGTGGAGAATGTCTACAATTTGGGATTAATTATTTTCCGAGATCAAGTTGTACGCTATGGGTGTATTAGGGATCATCTCCGGCAGACGCTATTGGATATGATTGCCAGGGAGCGGAAAGGAGAGGTTGTAGACCGAGGCGCAATAAGAAATGCTTGCCAGATGTTAATGATATTAGGTCTCGAAGGACGATCAGTCTATGAAGAAGATTTTGAGGCTCCTTTTTTGGAAATGTCTGCAGAGTTTTTTCAGATGGAAAGCCAGAAATTTCTAGCAGAAAACAGTGCTTCAGTATATATAAAGAAAGTAGAAGCTAGAATTAATGAAGAAATAGAACGAGTGATGCACTGCCTTGACAAATCAACTGAAGAGCCGATTGTAAAGGTGGTTGAGAGGGAACTCATTTCCAAGCACATGAAAACTATAGTAGAAATGGAGAATTCGGGACTAGTACATATGTTGAAAAATGGCAAGACAGAAGACCTTGCTTGCATGTACAAGTTATTTAGTCGTGTGCCAAATGGTTTGAAAACGATGTGTGAGTGTATGAGTTCCTATTTAAGGGAACAAGGTAAAGCCCTTGTTTCTGAGGAAGGAGAAGGAAAGAATCCGGTAGACTATATCCAGGGCTTGTTGGATCTGAAGAGTAGGTTTGATCGCTTCCTCCAGGAATCGTTCAATAACGACAGGCTCTTTAAACAGACTATTGCGGGTGACTTTGAGTATTTTCTCAACCTCAACTCCAGGTCCCCTGAATACCTCTCATTATTTATTGATGATAAGCTGAAAAAGGGAGTCAAAGGGCTAACAGAACAAGAAGTAGAAACAATATTGGATAAGGCAATGGTCCTTTTTAGGTTTATGCAAGAAAAAGATGTATTTGAACGTTATTATAAGCAACACTTGGCAAGGAGACTTCTTACAAATAAAAGTGTTTCTGATGACTCTGAAAAAAATATGATTTCTAAGTTAAAGACTGAATGTGGATGTCAATTCACATCAAAACTGGAAGGAATGTTTAGGGATATGAGCATCTCAAACACAACTATGGATGAGTTCAGGCAACATCTACAGGCTACTGGGGTATCTTTAGGTGGTGTTGATCTCACAGTCCGGGTGCTCACAACAGGATACTGGCCCACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGACATGCTTTTGAGATATTCAGAAGGTTTTACTTAGCCAAACACAGTGGTCGACAGCTCACACTCCAGCATCACATGGGTTCTGCAGATCTCAATGCCACCTTCTATGGACCAGTTAAAAAGGAAGATGGATCTGAAGTTGGCGTTGGAGGCGCACAAGTAACTGGCTCTAATACACGGAAGCATATATTGCAAGTCTCCACTTTCCAGATGACCATATTAATGCTTTTCAATAATAGAGAAAAATACACATTTGAGGAAATTCAACAGGAGACAGATATCCCTGAACGAGAACTTGTTAGAGCCCTGCAATCCCTCGCCTGTGGTAAACCAACACAGCGGGTCCTCACCAAGGAGCCCAAGTCAAAGGAGATAGAAAATGGTCACATATTTACAGTTAATGATCAGTTCACATCCAAACTACACAGAGTCAAGATTCAAACAGTTGCTGCCAAGCAAGGTGAATCCGACCCAGAAAGGAAAGAAACAAGGCAGAAAGTAGACGACGACAGAAAACATGAGATAGAAGCTGCTATAGTGCGGATAATGAAATCTAGGAAGAAGATGCAGCACAATGTGTTAGTAGCAGAGGTAACTCAGCAGTTGAAGGCTCGATTCTTACCAAGTCCAGTTGTTATTAAAAAACGTATTGAAGGACTTATTGAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGTAGCATAAAATGCGTTCAGAAACTTGATTTATTATTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAATATTAAGACGACCATCTCTTCTATTAAATTACAGTACATGTTCTAGACCATTCAGATCAAGCCTTTACTCCCTTTGAGAGTTTTCAACATCAGTTGATTGAGCTTCAGGCTTTACAGCGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCTGAGTTTTGTTTTCAATACTGTATGAAAACAGGAAAAAATAAAACAAAATTTAGAAAATACAGCTCATTAAAATAAAAATTGTTGGATTTCATTTCCCCAGGTCTTCAGTGTTCATATAATTGTGTTTTTGTAGCGTTGCTTAGCACTTTGCACATTGTATAAGTTGGGTAACAATAATGGTAAAAGCAGTGACACGATTCCCAGTTATCTCGCTCTGCTTAAGGCATTTCTTTAGCTCGTCTTGTTTAATTTAAAGGTTTGATTATATACAGAGACCCAAGCATAAAATTTGAGCATGCTTTATTCTACCACTTGCACTTACTAATCTAATAGCCTTATGACCAGGAACCTTTGTTTTGGGCTCAGTACACACCCTGATTTGATTTTTCCCTACTGTAATTTGAGATGTCCCAAATTCTTAACAATGATTAGGTTTTGTTCTGCATTATTTCTAGAGAAAGAAAATATTTTAGTATGTATAAATTGTACAATAATTTTTTGCTGTTGTACTCACTGCTAATAGTGGATTGTATAGGGCAGTGTTTTATTTCATTTATTGTAGGCAAACATAAATGAGTTTAGTATACATATACTCACTAATTCAAGTATGTCAGAGCACAAAGTTGGCAGCTGGTTATATTTAATTCAGCCCTTCTGAAAAGCACATGTGGTCTACACTTTGTTTCTGAATATCTTAGGTTCCCCCTCTCAAATATATATATTTTGGTGAAGCTGGGATGCACTGTTAATTTTCTGCTTCAGAATGCATTCTAAAGATGCAATAAATATGATTACCTTAATATTTTTTAATAAGATCTTCAGTTCTTACAGCTGCAATTTGGAAAGTGATTAAGCAATATTTTTCAAACATGATGATTCTTGGATATTTAGCTCTTATAATCCAAAGAGTCATCATTTTATGTTTTCAAAGATGTGCTCTGTGCTGAAGATTCACGTCAGTTATCCTGTGCTTCCAACTTTCACCAATATTTTTTACCTGACTGATCTGCCAAGGATTATAGTTTGCTTTATTTTAACTTCAGAGTATTTTTATCTTCAATTTTATTTAATTTTGTTTCATTCTGTTTTCATAAGACAATGTTTCAGATATGTAATTGGGGCAAACCACTATAGATTTCTGTTGATAGAAAGATGAAATGTTACTAATAAGTTTGAGTAACCAACTGACCCTTGGTTGACTATGGTAAACTGTTGATACATTTATTAGAATGTATGTCTCAGAAGATGATATCTGTTTAAATTTATGGTCAAGTTAAAACTGAATTCTAATATGGATTAAAAACTCCACGTCAATATTTTTTCCCCATGCGTCTTGGGTTATAATTTTCCTTTCAGACTTGGAAATATGCTCTTATTGCATTTAATTTCGTCTCCATTTGTGTTGTAGAAATACAGGCCGCCTGCTCTTCTCAGTGCTTTCCAGTTTTGCATGATAGAGTTAAAATACAAGTGAAAGCTATCATGAACATTATTCTCAGGATGCTTTGACCATACTTGAGCGGTAGTCAGTCAGGTGTGACATGGGAAGATGAAAGGTTTCCCTTTCAGACTACACAATTGGAATTTCTATAATGATAGGGTGTTTATCTACAAGAAAATACTGGTATTGCACATTTCATTATTTTTTTTTATTGGTCTCAGTTTCCAATTAAATGATTGATATATATATATATATAAAACTTTAGGGAATAGAATACTGTCAAGTTAATATGAAAGATGTAAAAACTTCCATTTGAAGTCTAAATGAGACATTAAAACAAAAATTTAGGTTGTGGTTTGAATTAAAAATCAGTCAAGTTAAATTTGTGTCATTGTCTCAAGTATGGATATACAAATCACATGTAGAATTCAGAGACACACTTGTTAGTTTTGGAGAACAGGTTTGATATCTATGCTTCTAAATGCTTATAAATACATTAAAACATTTCTCAATTGCAGTTGAACAGTCAGCGAATGCAGCCATTTTGCATTCAGTTGCATTTCAGTCAATTGCAGTTGAGTTGAATGGTCAGAAAATGATGCTGTACTGAAAAACAAAATTGGATCACCCAACATGTTTTAAATGTTTTAGTGCATTAGCTTTATTTTAGTTCATAAAGCTCATAGTGATACATTTTGACGTTGCTTTCTTTTCAGGAGAGGTCATTCATGCTGTTTTTCTTCTTTGTTTTTTAATGTCTTAATCTCAAACAATGATCCTAACCATTCATTTAATCCTGTTGATGTGAATAGATATTGGTGACTTACTTGAAGAATTTTAAGGAGGATGGATACATAGTTTTTCAACTGCAAAAATGATGTACTCTTTGTTCACTTGTTTAATTGTAATTCTCTGCTATCATTTTTGAATCCAGGACAGTGTTTATTTTGAATTGTTATATAGTTATATTATTTAAAGATTGAAAACTCATTGCAATTAGGGAACACACAGCCTCACAAAATAAACTGTGGTTGTGATTGTAAGGTTCTTATGTCAGTGAATTTTAAAAGGGGGCGGGAGAGGGATGTATTTCTTGCTAAAGAATATACTAAAATCACCCATGTAGCACTGTAAACATAGACCGGTATCACCACCACCCCCAAAGACGCTGGTGTATTCTCTTGGCAAAAATCTTGTCAGCAAAACACTGATGATGCTCCACCCGCCAGAATGTACATTGGGTAGCAGGAAAGGCTTAGGTGACAGGCAGTGATCTTACAATTACGTCTGCATCCCTAGGAGACTAGTTTGCATGATCTCAGCTTTCTAAGTATTTAGTTCCCAGTTCTAGAAAATAATTGTATGTTCATTCCAAATAATGCTGTTTTTGTTTGCAGTTTTAAGTACATATTTTGAATAAGCATTACAGGGTTTTATCTTTGCCTGCCTTATAGCCTTGATTATCACCTGGTATCTCATGAATGCTATTTTTGTCCAAGTCTAGGGAGGAGAGCAGTTAACGTACCACAGTTGTAGATCATGTATTCAGTATGATGCATATAGTCAGGCAATAAGTATTTTGTACACTATCAGTAAGAACATTAAACCATTTCAGGTTAGCAAAATCAGTTCAGTTCAGTTGCTCAGTTGTGTCCGACTCTTGCGACCCCATGAATCACAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAAACTCATGCATGTCCATCAAGTCAGTGATGCTTACAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAATTCAAAAGCATCAATTCTTCGGCACTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACCACCGGGAAAATCATAGCCTTGACTAGACAGACCTTTGTTGGCAAAGTACTGTCTCTGCTTTTCAATATGCTGTCTAGGTTGGTTGTAACTTTCCTTCCAAGGAGTAAGCATCTTTTAATTTCATGGCTGCAATCACCACCATTTGCAGTGATTTTGGAGCCCCCAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACCAGATGCCATGATCTTCGTTTTCTAAATGTTGATCTTTAAGCCAACTTTTTCACTCTCC EMBV3_40702 CATAATCGCGGAGACTGCCTGATGCTATAAGCAAGAGAGGGTTTCTGTCCAGATGTCTGC Gene GeneID:523538|TRPV3:NM_001099024:126_cdna Constitutive 0 NULL GeneID:523538 19 GENE TRPV3 MGC159979 transient receptor potential cation channel, subfamily V, member 3 EMBV3_15381 TTAACAGGTAATAAGTACCATCTGGGATTCCTGACTTAACAGCCCAGTCCGGGAGCCACC Gene BVT0102_349214 - 1 EMBV3_15572 GK000007.2:4851459-4859845 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10100 CAAGCTGCAGTTGAAACTAATGCTCTTTTGAGCCCTAATCCACCCACAAGCATCTCCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13860 ATAAAAACGTCTGACACTTGCAGGCTATTTCCTCCATTTGGAGACCCCTGGCCTTCCTGC Gene BVV0102_128192 + 0 NULL GK000001.2:100959580-102337837 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248730 TCONS_00091301 TCONS_00198297 TCONS_00210913 TCONS_00087260 TCONS_00176155 TCONS_00087259 TCONS_00065232 TCONS_00087286 TCONS_00222435 TCONS_00190489 TCONS_00176420 TCONS_00004714 TCONS_00004712 TCONS_00238380 TCONS_00140862 TCONS_00167521 TCONS_00252111 TCONS_00049674 TCONS_00250376 TCONS_00135546 TCONS_00091433 TCONS_00091303 TCONS_00087262 TCONS_00004713 TCONS_00204791 TCONS_00219026 TCONS_00091417 TCONS_00040888 TCONS_00229354 TCONS_00084513 TCONS_00166151 TCONS_00251110 TCONS_00196835 TCONS_00137278 TCONS_00122146 33 XLOC_151675 XLOC_056076 XLOC_119954 XLOC_129423 XLOC_052423 XLOC_105934 XLOC_039954 XLOC_052436 XLOC_135744 XLOC_116524 XLOC_106198 XLOC_001092 XLOC_145047 XLOC_085291 XLOC_102357 XLOC_155052 XLOC_029805 XLOC_153319 XLOC_081769 XLOC_056208 XLOC_056078 XLOC_052424 XLOC_124525 XLOC_132345 XLOC_056192 XLOC_024702 XLOC_138849 XLOC_051600 XLOC_100989 XLOC_154053 XLOC_118500 XLOC_083488 XLOC_073701 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_18404 CCTCGGCCCTGGCACCTGGAGGGAACTCAGGTCCTCATCAACCTGGCGTTGCTGATACAG Variant GeneID:282384|TM7SF2:NM_174622:467_cdna 636^739 1 EMBV3_30651 GeneID:282384 29 GENE TM7SF2 MGC139699 transmembrane 7 superfamily member 2 EMBV3_13971 CACGTGATTTTGAAAAGGAACCCGAACGGCCAAGATGAAAACCCCTGCTTTCTTCACCTG Gene GeneID:617631|LOC617631:XM_002698572:130_cdna UTR3_Alt 2 NULL GeneID:617631 26 GENE LOC617631 NULL similar to Uncharacterized protein C10orf88 EMBV3_12893 CTCATACGTCCCCAGCCCCTGAGATAGAAGAAAATGCATCTTACACGGAAAGTTGTGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42498 GACCACCTTTCTACCTCAGATCCATCTTCATCCATCACGTTGGAAATAGCTTTATGCCGC Gene BVT0102_112952 + 0 NULL GK000009.2:83319037-83434222 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236106 TCONS_00236099 TCONS_00236103 TCONS_00236104 TCONS_00236109 TCONS_00236098 TCONS_00236123 TCONS_00236102 TCONS_00236125 TCONS_00236097 TCONS_00236108 TCONS_00236124 TCONS_00236105 TCONS_00236107 TCONS_00236118 TCONS_00236112 TCONS_00236115 TCONS_00236114 TCONS_00236111 TCONS_00236120 TCONS_00236113 TCONS_00236110 TCONS_00236101 TCONS_00236122 1 XLOC_144375 Coding TCONS_00236123 XLOC_144375 Coding Coding UTRN 9:83236202-83320493 j TSS176810 4413 1 TCONS_00236123_5 590 19 0.947870447265393 6.57452675614838e-05 0.00126287507352268 0.0002282564191645 0.000307562701465119 7.81590418191304e-05 7.50660299747069e-23 0.000199751123477082 9.69811399765049e-05 0.000830290749983374 2.84615658554003e-06 3.78480567888856e-48 9.22472207060334e-06 2.40313168448104e-30 0.000349490767903329 0.000275870965074941 0 2.7547769132012e-172 1.27209769023765e-159 0.000253762214274634 0.000789600010344973 4.43308069656971e-05 0 0 1.14594191645835e-132 0.00116569462895875 0.000531156493938422 0.00112037496843233 0 8.89453152022558e-41 0 NM_001278561.1 UTRN Bos taurus utrophin (UTRN), mRNA. 0.0 7057 99.97 0.887151597552685 NM_007124.2 UTRN Homo sapiens utrophin (UTRN), mRNA. 0.0 4646 86.75 0.863131656469522 TCONS_00236123_5 sp|P46939|UTRO_HUMAN UTRO_HUMAN Utrophin; 0.0 1192 96.11 0.998305084745763 3 coding 0 0 0 0 -0.124832850908105 0.452588545276771 -0.104178410713673 0.16825945203953 TGAGCCTTGGTTTGGTCCTTCACGATGGGGTGTCTGTCTCTAAGCGGTAGTGTTGCCATGGGGATTGAAATTACTCCAAAGAGGAGACAAGAGCTCGAGTGAATCCTAGTAGGCTGTCTTAAAAACTGGGAGCCTGTGATGAATTTCTTTGGATTGTACTCTATTTTCAGCAAATCCTTCTTTAATTCTTTTTCTTCCCTTTTCTTTTAAAATTCTTATTGGTAATAGGGAGGAAGCTGTTTTATTAGCAAAATTTGGAGGGTGTGAGGTCTGAGTGAATCCCCACAGGAGAAGAGGGCACATTTACAGTGAAGAAGGAAAGACTTGAGGCTAAAGAGGAGGAAGACTCAGTGGATTGTGTGATGGAGGTGTTATTCACAGTTCTCCTCATTTCCCTCTTTGGAAATTTGATTAGCACTCCTAAAGTTAAACGACTCTTCAGAGCACTTCTGCTCTCAGAGAATTTATTCTGAATGAGAATCTACATCAGCCGGACACAGTCATCAAACACAGACAACCTGTTGGGATCATCCTAAAATGACCGAACTCTTTCAATCCCTTGCTGACCTGAATAACGTACGTTTCTCTGCCTACCGTACAGCCATCAAAATCCGAAGACTCCAAAAAGCACTATGTTTGGATCTCTTAGAGTTGAATACAACAAATGAAGTTTTCGAACAGCACAAACTGAACCAAAATGATCAGCTTCTTAGTGTTCCAGATGTCATTAACTGTCTGACAACAACTTATGATGGCCTTGAACAAATGCATAAGAATCTGGTCAACGTTCCTCTCTGTGTGGATATGTGTCTCAACTGGCTACTCAATGTATATGATACGGGCCGGACTGGAAAAATAAGAGTGCAGAGTCTGAAGATTGGATTGATTGCTCTCTCCAAAGGCCTGTTAGAAGAAAAATACAGATATCTCTTTAAGGAAGTGGCAGGGCCCACGGAGATGTGTGACCAGAGACAGCTGGGCCTGTTACTGCACGATGCAATCCAGATCCCTCGGCAGCTGGGGGAGGTAGCAGCCTTCGGGGGCAGTAATATTGAGCCCAGCGTTCGCAGCTGCTTCCAACAGAATAACAACAAGCCAGAGATAAGTGTGAAGGAGTTTATAGATTGGATGCGTCTGGAGCCACAGTCCATGGTTTGGCTGCCGGTTCTACATCGCGTGGCAGCAGCTGAGACTGCAAAACATCAGGCCAAATGCAACATCTGTAAAGAATGTCCAATTGTTGGATTCAGGTATAGAAGCCTGAAGCATTTTAACTATGATGTTTGCCAGAGTTGCTTTTTTTCGGGTCGAACAGCGAAAGGTCACAAATTGCATTACCCAATGGTGGAATATTGTATACCTACAACATCTGGGGAAGATGTACGGGACTTCACAAAGGTGCTGAAGAATAAGTTCAGATCGAAGAAATACTTTGCCAAGCATCCTCGGCTTGGCTACCTGCCTGTCCAGACAGTTCTTGAAGGTGACAACTTAGAGACTCCTATCACACTCATCAGTATGTGGCCGGAGCACTATGACCCTTCGCAGTCTCCTCAGCTGTTTCATGATGATACCCATTCAAGAATAGAACAGTATGCTACACGACTGGCCCAAATGGAAAGGACTAATGGATCTTTCCTCACTGATAGCAGCTCTACCACAGGAAGTGTGGAGGACGAGCATGCTCTCATCCAGCAGTACTGCCAGACGCTCGGAGGGGAGTCCCCAGTGAGCCAGCCCCAGAGTCCAGCGCAGATCCTGAAGTCAGTAGAAAGGGAAGAACGTGGAGAACTGGAGCGGATCATTGCCGACCTGGAGGAAGAACAAAGAAATCTGCAGGTGGAATATGAGCAGCTGAAAGAGCAGCACTTGAGAAGGGGCCTCCCTGTCGGCTCCCCTCCAGACTCTGTTGTGTCCCCTCATCACACGTCTGAGGATTCAGAACTTATAGCAGAGGCGAAACTCCTCAGGCAGCACAAAGGTCGGCTGGAGGCCAGGATGCAGATTTTAGAAGATCACAACAAGCAGCTGGAGTCTCAGCTCCACCGACTTCGGCAGCTGCTAGAGCAGCCTGAATCTGATTCGCAAATCAATGGCGTCTCCCCTTGGGCTTCCCCTCAGCAGTCGGCACTGAACTACTCCCTGGATCCAGACCCGGGCCCGCAGTTCCACCAGGCAGGCACGGCGGCAGAGGAGTCGCTGGCACCCCCTCATGACACCAGCACGGACCTCACAGAGGTCATGGAGCAGATCAACAGTACGTTTCCATCCTGTTGCCCAAATCTCCCCAGCAGGCCACAGGCAATGTGAAGTATTCATCTAGCCAACCAACATTTCTTGATTTACAGTGTTGCCCTTTTCAGCAAATGCCAGTGTCAAGTTCCATTTAATCAGAAGCTCCATGGCTCTTTGAATTATGCTGTTGAGTGCTGACTGTGTGTTCTACTGAAGGAGTAAAACACTGACTATCCAAAGAGGAAAGGATATTTTGTTTTTATAATAATCATATGTTATTGTTTTCTTCTTCCCTTTCTATGCAACTGTAAATTAATGAACAGAATGGTATTTGGAAATGGAAATACATTTGTCACTGATTTGTATACTGTATACAGTATTGGGAAAGTGGGTGGGGGGTTTCTAATATGAGACCTTCTTTTTAATAACCGTGAACAAATGCATCAGAATTAGAAGACAATTTTACATTTTTACATTCCTTCATATTAACCTTGTACAATAACTTCATTTGTTTCTTTGACTCTTTTACCATTATGTTTTGGTTATTTATAATTCATAAGCCACATGACCAAATAGATTTTATTTGTTTCCATGATTTGGCCAAATTAATAACTTCATATATGTCAATCAAATATTATATGTTTATGGATTAGGCTACAGCTCTGTGTATACTATTTAACTTTACTTCACATCATACACTTATTTCTTTAGTGACCACTTGGATAACCGCAATAAAAATCCTGTGGGCCTAACAGGCATTTCTATTGGGATTTTTTTCCCCTTGTCTTTTATCTCCCTGCTCTATATAAGTTGGTGTTGATTTCTTTATTTATTTTATGTCCCAATCTGTATGACAGAATTATAATAATCTCAAAGATTATTTTACCAAAGGTTGCCCATTTAAGCATATTTTCATTTTGACACAGAAACAAGATTTGGTCCAACTTTTCCTAGTTCCCAGGTCTTGATTTTCATCATTCAGTACACAGCAGACCTGTACCTAATTGTGATACCAAAATCCATGGCTGTCTTTAGTTCCCTTTGAAGAAATTTTGATGGTTGTTTATGTCTCTAATATATTCAAGCCCTCAATGATTCTTGAAACCCCCGGTTATTTTCCTTCTGAAAGCAGACACAAATTTAATGAATGTCTCATTTTACTTTTTGAAGGAATAGCTTGTTATATTACCCTTCATTTGACCAATGCATTTGGGAACGATGTTTATCAAAAGCCTGTATCACTGCTTCTATAGAAGAATGAAATTAATGCTTAGATGGTGGAATCCTGGCTTACACCTTTGAGTGCATTCAGTTAGGTATTTGGTTCAGCTCCTGATTTAACATTTATTTGGTTCAGTTTAAACATGCCATGTCATTTACCAAATGTAAAGAAACCAAAAAAAAAAAAAAGTAAAAATAATGTGTTTTGATTGAAGCATATGTGCTTTAAAACATCAGGACATTTTAACTTTGAGTTCTCTTTAACTGGGATCTGGCCAGAAGGAGGCTTAAAGTTAGAAATTCCTATTCTTTAGAATAGGTTGGGTGGGTTGGGGGGCAAGGGTGTCTATTTGCAGTAAAGATATTTTGAGAAGAAGAAAATTGTTTTATATAAGAGGAAAGCCATGACCACCTTTCTACCTCAGATCCATCTTCATCCATCGCGTTGGAAATAGCTTTATGCCGCTGCAGTTTGAAAAATCTAGAGCTTCTATCAGATCACATCATACCCAGTAAAAATACCTATTTAAAGAAAAAAAAATTCCCTGAACTCTGAACTACAAGTTGTAGATTTGGTGTCTTCCTTGTCCTTCCTTTGAAAAGTTATGTATTAATTTTTTTTCTGCCTGTAATTGTGTGCAACATGTTCTCTATCTGCTATTAAGGAAAAGCTACATAAAACACTACATTGTAACCTTTTAAGTAACGGTAAATATAAAGAAATATATTGCAGTAACAAGGGGAAATAAGTATGTAGTTCTTTTGAAATATGTGGTAAAGAACTAATCATAGACTATCATCTAAACTGGTTACATGTTGTATTTTTCATCCTGAATAAAAGTAATTTTAACACAAGGTGACTTTGATATTCTTCAGTGGTGTTTACTGATAGACTTAGAACTTTGAATGTATGATTATGAAAATAAAATAGAAAGACAGCCTATATCCTGATAATCT EMBV3_07532 AGATCGGGTGTCTCTTCTTTGCCGCGTGCTTTTGCCCCCTGGTCTCAGCTCGGCTCCAAA Gene GeneID:768319|MT1E:NM_001078134:474_cdna Constitutive 0 NULL GeneID:768319 18 GENE MT1E MGC137031 MT metallothionein 1E EMBV3_06701 AATCTGATGGTGTCTGCTGCTGTTCATTCTCCAGAGAGCTTCTAACACCCCTGCTCAAGG Gene BVV0102_059043 + 0 NULL GK000022.2:11457990-11478278 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36331 AACTGCAGCTCCCAGGCCGTCTTCCCAGCCCCCTACGTGGCCACCCTGCTGCTCTCTGTC Variant GeneID:317756|GPBAR1:NM_175049:41_cdna 716^940 1 EMBV3_37523 GeneID:317756 2 GENE GPBAR1 MGC152072 TGR5 G protein-coupled bile acid receptor 1 EMBV3_11873 GCTCGTTAATTTGGCATATCAAAACGCAGATTGATTTAGAGAAACGCACACCCTTTGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14554 CGGGATCCAAAAACCTGCCCTTCTTTGTCGTCTTCTCCAATGACCGCAGCAATGGGACTA Gene GeneID:540384|GDF2:XM_002698977:144_cdna Constitutive 0 NULL GeneID:540384 28 GENE GDF2 NULL growth differentiation factor 2 EMBV3_04269 CCCAAGCTTGAGCCAGTTCCTGTTCAAAAGCCCACCAAGAAAACACATTATGGATCGTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31665 AGTGAAAGTGGACAGGATCTGGTGGGAAGCAGAGGAGGAAGAAGACGCAAGGAGATACGG Gene GeneID:100298822|LOC100298822:XM_002697358:340_cdna Constitutive 0 NULL GeneID:100298822 23 GENE LOC100298822 NULL hypothetical LOC100298822 EMBV3_17989 TGCCCTGGAACCAGAACAACTGAATGTGGGGTTATGAGGTCTCAGCCTTGAGGATACCCA Gene BVT0102_094559 + 0 NULL GK000003.2:15703045-15715718 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19446 CCTGCTATCTACAACAAGGATGAAACTGGAGGACATTGTGCTAAGTGAAACAAGACAGAG Gene BVV0102_218618 - 1 EMBV3_23711 GK000009.2:51561212-51596387 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14269 TGTTTCCAGAAGGTGGAGAACACAGGGAACTGACTACTGGCTGGATCTGTCTCTCTCCTT Gene BVV0102_177500 + 0 NULL GK000005.2:103207770-103241263 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31067 GTCATCCACAAAGGAGTATATGCCTTTTGTGACCTTATTATGAACTCACAGTTTCTATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26291 GAGTGCAGCCCAGGGGCGACCCCTGAACAGGGAAGCCCTCGCTTCCTCCACGCCTGGCAC Variant GeneID:504668|MATK:NM_001035011:179_cdna 114^224 1 EMBV3_22445 GeneID:504668 7 GENE MATK NULL megakaryocyte-associated tyrosine kinase EMBV3_40800 TGCAAGGAGAACTACTGTCTTATGATCACAGTGAGATCAGAATTTAATAAGGACTTCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25728 TTCGGAAAAGCACTGTTATTTTCCACACAGCGGGAGGAAGCACTGAAACAAAACAAAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20704 TCATGAACACCCACAGGAGGTCACACCTGATCTCAGCTTCCACACAGACCCAGAAGAGAT Gene GeneID:767868|LOC767868:XR_082721:23_cdna Constitutive 0 NULL GeneID:767868 24 GENE LOC767868 NULL hypothetical protein LOC767868 EMBV3_22110 CTTCACCTTGTGCAGTTAGGTCATCGCTTGCATCTCCTGCTGGTATCGTCTGTCACGTAT Gene GeneID:522406|B3GALT6:XM_002694133:497_cdna Constitutive 0 NULL GeneID:522406 16 GENE B3GALT6 NULL UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6 EMBV3_37126 CCCGAAGGCTCTCCGTCGAAGGCAACATTGGCCGGCGCTGCCACCAGCCTTGGAAACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31194 CCATCTTCCTGGATGTGATCTACATTGGCATCTCCTCCCTTCCGGGTAGCCCACTGGTCT Variant GeneID:508521|AGTRAP:NM_001075363:49_cdna 271^721 3 EMBV3_27188 GeneID:508521 16 GENE AGTRAP MGC140564 angiotensin II receptor-associated protein EMBV3_21646 CAAGCTTTTAACACATTTTTAACCTAGGAGCTCTGTTGCTGGAAGTGTGAGTCCCCAGCC Gene GeneID:282514|PAFAH1B2:NM_174664:32_cdna Constitutive 1 NULL GeneID:282514 15 GENE PAFAH1B2 NULL platelet-activating factor acetylhydrolase, isoform Ib, subunit 2 (30kDa) EMBV3_15107 AGAGCATAGTTTGTGAAATGATGAGGGCATTTTTACCTGCTTGCTGTGACCAGCGTGTGT Gene GeneID:539249|G3BP2:NM_001046455:95_cdna Constitutive 0 NULL GeneID:539249 6 GENE G3BP2 MGC129040 GTPase activating protein (SH3 domain) binding protein 2 EMBV3_20731 CTAAGACTGACAAACCTCCAGCTCGAAAGAAAAGTGGGCATCCCGCCCCTGGTGGTGTGA Gene GeneID:539106|CNTROB:XM_002695837:233_cdna Constitutive 0 NULL GeneID:539106 19 GENE CNTROB NULL centrobin, centrosomal BRCA2 interacting protein EMBV3_32965 TGGCCCTCGATGTGCTCTGCGTGTTGCTGGACTCTCCTTTTATTCGGGCCACTCTTCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40273 TCTATAACTACAACTTGACCACAGGGGCTTACTGGCATCTCCAATTCACGAAGCGGGAGG Gene BVT0102_193459 + 0 NULL GK000021.2:27737944-27897954 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35011 CAAGCCAGAGTGAGTCAAACCATACACTTATATCTCATAAAAACATTTTGGGAGTTAAAA Gene GeneID:534697|KLHL7:NM_001076037:32_cdna Constitutive 0 NULL GeneID:534697 4 GENE KLHL7 MGC140732 kelch-like 7 (Drosophila) EMBV3_27146 TACAAGAGACTGAAGAAGAAACCAAAGGGACAACAAGCCTCCACTGCCCAACCTGTCTGG Gene GeneID:616282|TEX101:NM_001101252:382_cdna Constitutive 0 NULL GeneID:616282 18 GENE TEX101 NULL testis expressed 101 EMBV3_00277 AACATCGCTGTGTTTGGTGTCTGCGTTCCTTACAGCAGGGCTCTCCAGTCTCAGTGTCAC Gene BVT0102_032840 + 0 NULL GK000012.2:34757697-34876046 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035170 1 XLOC_020853 Coding TCONS_00035170 XLOC_020853 NonCoding Coding - 12:34852585-34853351 - TSS25838 766 1 TCONS_00035170_2 62 1 0 0 3.9354184279445e-05 1.20809392489787e-05 0 0 0 0 0 1.03004415004579e-05 0 0 0 4.12039864760077e-05 0 0 0 0 0 0.000505522520805858 0.000272261594725325 0 0.000319689679882017 0 0 2.7135121147431e-05 9.19774894454324e-06 3.05960610713018e-05 3.28845761315393e-59 0 0.000149129385569858 XM_005213823.1 SACS PREDICTED: Bos taurus spastic ataxia of Charlevoix-Saguenay (sacsin) (SACS), transcript variant X2, mRNA. 0.0 789 100.00 0.569190600522193 XM_005266338.1 SACS PREDICTED: Homo sapiens spastic ataxia of Charlevoix-Saguenay (sacsin) (SACS), transcript variant X1, mRNA. 7e-33 145 68.17 0.566579634464752 0 noncoding CGTCTGCTGAGATGAGGGCGAGGAGCACGGGGCCCAAGAACATCCACAACATCTTTCCCACTTCCTGCAGAAAGAAATAAGGAAGGTTCTCAGATGAAAATAGCTCCTCTTTTTTGGGGGGGAAAAGCCAGAACCCATTAGCTGATCAGTTTTACCTGAAGAAGGCCCGTGGGCTGCTGATCAGCAGGCGTAACCCAGGGAGGTGACACTGAGACTGGAGAGCCCTGCTGTAAGGAGCGCAGACACCAAACACAGCGATGCTTTCCCACATCAGATGATGAATGGACACTGAGGGGGAAACAGTCTTTCTGCTGGCCAGACAAGCTGGACTGGAGTCCACGCTTATGGGAACGACTTGGAAGGAGGAAAAATATTTTCATGGTTTTCCCAGACAGATATTCGAAGACAAGTGATAATGGAGACCCAGGATAATAGGTAAATGAGTGAATGTTTTAAATTACGGCACTTTGCACTGAGATTCAAGGCTTGCTGGGTTTTCACATAGGAAACATTCGTTGGCAAAAACAGAGGGAAGCTCTCTTGAGGTAAAAGTGAATCAACCCCAGACACATTGGTTCAAATGGGGATTGTGCGGATAACACTTGCCCCATGGGTTGACGATCATTCCTTCCATTTCCCAGATGGTTCTGGGTTCTGTTTCCTGGTGTGGCTCTTACAGTGGACAGTTGACTCGATGTGTCCTATTTTCTCCCTCATAAAATGTATGTATTGGTGCCTTTCACTGGCCTGTGATTATTTGGAAAAT TCONS_00035171 s 5' 0 TCONS_00035171 s 5' 0 EMBV3_40841 TCTCTCCTTGGAGCGCCCGACGATGATCAAATATGGCATCAACAATATCCGGGAGCTGGT Gene GeneID:522024|FARSA:NM_001101107:41_cdna Constitutive 1 NULL GeneID:522024 7 GENE FARSA NULL phenylalanyl-tRNA synthetase, alpha subunit EMBV3_10195 CATCCTCATGGGGGTATATGTGCCCCCTGTGTGTGGGCTTTAGTGACTCTCCCACACTCA Gene BVV0102_386192 - 1 EMBV3_28445 GK000019.2:57126124-57139493 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00576 CCTGAACTACAGTTATGCTTGGATTTTGGGATCCATCAGCACCGTATCCCTCCTGGAAGC Gene GeneID:526844|DOLK:NM_001035365:139_cdna Constitutive 1 NULL GeneID:526844 11 GENE DOLK TMEM15 dolichol kinase EMBV3_04195 CTTGCTTTGGCCAATGGGACATTAGAGAATGTGATGCAAGCAGAGGAATAGTGATGGCTC Gene BVV0101_052228 + 0 NULL GK000007.2:64546889-64561358 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213936 1 XLOC_130579 NonCoding TCONS_00213936 XLOC_130579 NonCoding NonCoding SLC36A2 7:64560379-64563170 x TSS160147 1000 1 TCONS_00213936_2 85 0.376 2 0.642293906810036 0 0 0.000203588912775366 3.32165652998983e-05 0.00121948336725224 3.5770558839294e-06 0 0.00067427787525545 0 0 0 0 0 1.41120080960403e-05 4.90620086683289e-06 0.00301092405734974 0 2.50909256776053e-05 0 0 1.2142920764167e-05 0 0 0 0.000200925856488902 0 5.85915593961008e-06 0 0 0 XR_231763.1 LOC101907059 PREDICTED: Bos taurus uncharacterized LOC101907059 (LOC101907059), 1e-100 370 100.00 0.204 NM_181776.2 SLC36A2 Homo sapiens solute carrier family 36 (proton/amino acid symporter), member 2 (SLC36A2), mRNA. 1e-43 181 77.05 0.241 0 noncoding TGGTGGTCTGGCTGTTCTGGGAGATGGGGCTCAACTGGGATGATTAATTTCTGCTCCACACAGTCTCTCATCCTTCAATAGGCTAGCCCTGGCTTCTACACCTGGTGCTCTTGGCTCCACAGAGCATGATGATGAATGTTCCAATGCATGAGCCATCACCATTCCTCTGCTTGCATCACATTCCCTAATGTCCCATTGGCCAAAGCAAGTTACAAGGCCATAACAGGATTCAAAGGGCAGAGATACAGATTTTACTTCTTGATGGGAGGAGCTGCAACATGACATTGTCAAGAGGAATTTGAGGCCATTTTTGCAATCTATTACAAGAACCTTGAACTTTGCTTGGTGTGTGGTGGGTAAGCAAGAATGCTTGTTGCAAGAATTAAGAGGTTAAAAATAACAAGAATCAAGAGGTAAATAATGAAATAGTGTCATTGTTTAGCTCCTGCCTACCCCCACAACCCTGCCCCCACCATTGGCACATCTACTTTCATGAGGACTGCTTTGTTGAGATCTTTGAACTGGGCCAAAACTTTATCCAGCTGTCGAGAAAGTTTATTGCCCTTGATTTAAACATGATGGCTCTTTTCTGTCTGACAGCTGCAGTTTGCACTGGACCTCTGGATCCTACCGCTTTGATGCTGGAGCTATTCACACTTTGCTGGATTATGGATTATGTCCACTGGAAAAAAGGACACCCTTTACCAAATCACCGTAACCTTAGCAGGCTGCCCCTCCTTCTGTCAGTCGCTGCCTCTTGGATCCCCCCTGTTGGCTTCCTCTTGCATAGCCCCACTCAAGGCCTGGGCTTTTACATTTTTTATTTCACTTGATGGACAATTATCCTGATTACAAGCAAAACACAGAAGCTTCCCCCAGGTCTGCTACAATGGAGTGTGGTATAACAGCACAAATCAGGACTGGAAGGCAGGATTCTCCCTGTGTGGCCTTGAGTTAAGTCTCCAACTCTTTCTCAGCTTTTTTCCTCATCTGCCAAATG TCONS_00217480 TCONS_00217481 r 3' 179 TCONS_00217480 TCONS_00217481 r 3' 979 EMBV3_02425 TGGTTGGATATTTAGAGGACATTATCATGGATTTCTTTGGTAGAAAAGTATATAGAAGAA Variant GeneID:613462|ARL2BP:NM_001076274:406_cdna 355^461 1 EMBV3_27206 GeneID:613462 18 GENE ARL2BP MGC134540 ADP-ribosylation factor-like 2 binding protein EMBV3_03394 CTCTGATGGACATTTAGGTTGCTTCCACGTCCTGGTTATTGTTAAGCGGTGCTGCAATGA Gene GeneID:539093|GZMA:NM_001099095:82_cdna Constitutive 0 NULL GeneID:539093 20 GENE GZMA MGC157236 granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) EMBV3_33587 GGAGCTCTCCGTGCCTTACGAACAGCTGATGAACGAATATAATAAGGCAAAGTGCCCCGA Gene GeneID:782166|KCNK5:XM_002697223:24_cdna Constitutive 0 NULL GeneID:782166 23 GENE KCNK5 NULL potassium channel, subfamily K, member 5 EMBV3_11517 AGCGCCGGCATCCTGCGCACTCCCATCCAGATCCCCCAAGTCCACTGGTGAAACAACTGA Variant GeneID:614434|CDCA3:NM_001035449:76_cdna 239^365 1 EMBV3_12281 GeneID:614434 5 GENE CDCA3 MGC127035 cell division cycle associated 3 EMBV3_30383 TACTGCTCGACGTGCTGTGCGTGCTGGTCGGTCCGGTACATCTCCGACTTCTTCAAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13395 GTTAGCCATGGAGCCTAGTGCCAGGACCAAGGACATGTGGACCATGACCTCAGCAAGTGA Gene GeneID:540175|GPRIN2:XM_002698941:32_cdna Constitutive 0 NULL GeneID:540175 28 GENE GPRIN2 NULL G protein regulated inducer of neurite outgrowth 2 EMBV3_29207 TCGTCGGCAGCTCACAGGGGGCAGGGCCAGGAATGACTTTGCAACTGAAGTTGAAGAACT Gene GeneID:616978|SFTA2:NM_001114523:201_cdna Constitutive 0 NULL GeneID:616978 23 GENE SFTA2 MGC148952 SFTPG surfactant associated 2 EMBV3_26651 ATGCCTGAACCGGCTAAATCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:100295597|LOC100295597:XM_002698752:8_cdna Constitutive 0 NULL GeneID:100295597 27 GENE LOC100295597 NULL similar to histone cluster 1, H2bd EMBV3_15323 TTCCAGCACCGTCAGTTACAGTGTTACCATAGTCGCCGTTAAGGCGGGAAACGATGAACT Gene GeneID:100139164|LOC100139164:XM_002695853:311_cdna Constitutive 0 NULL GeneID:100139164 19 GENE LOC100139164 NULL hypothetical protein LOC100139164 EMBV3_27735 TGGCTGGGATCGGTATCTGACCAACCAAAAGGGAGCCAGGAAGTGGGACGGAAAGTGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14052 CATCTCCTCCTGGACCCGGAGCTGTTCTCCTGGCAGGAAGGTGGGAGTCTACAAGCTTCT Gene BVT0102_140370 + 0 NULL GK000004.2:119447727-119520416 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190616 1 XLOC_116651 NonCoding TCONS_00190616 XLOC_116651 NonCoding NonCoding - 4:119468304-119469202 - TSS142984 898 1 0 0.00881795297043318 0.00401713943926585 0.00518347574067585 0.00368046391057636 0.00322180529992743 0.0017606417067272 0.00267556820938411 0.00388606020821441 0.00444589526983733 0.00113171091831587 0.000405322674062088 0.000276737189182204 0.000335495222641305 0.00128862428445483 0.000393369881903644 0.00579407891860395 0.00306901869816842 0.0041352477798284 0.00201232543807499 0.00170576402367405 0.00166660962454499 0.00327237368079102 0.00117484988929669 0.00276299128294432 0.00212174930131891 0.00160052877441382 0.00137018067120317 0.0012835470695746 0.000897397107267727 0.00191480807479757 0 noncoding 0 0 0 0 0.295981377631018 0.0483281297301255 0.056088378254749 0.355421337004285 CCCGCCGCGCCCGCGTCCCCTCGGTCGGCCGCGGCCCCCCGCTCTCCGGCGCACACGCGGGGTCCTGCCGCCTTGGCCGTCCGCGGCCCGGGTGCGTGTGCATGCTCTGACACGCCCTCTCCTTCTGCCGCTGCGTGTGTGAATCTAGGCTCCATTTAAGCTCAGGGCTGTGTGAAGGTGACCTCCGACCCCGGGTGACCCCTCCCGGACCTTCAGGGAGCCAGACCTTCCCCAGGCGACCTGGCCGCTCGAGGGCTGGAGTCGCCCTCACATTGACGGTTTTCATCCCCGTCCTCTGCACGCAGTCCGCGTTCCACCTCGGCTCGCCCATCTCCTCCTGGACCCGGAGCTGTTCTCCTGGCAGGAAGGTGGGAGTCTACAAGCTTCTGCCCCGCGGGGCCACCTCCGGCTCTTAGTGTGGGTCTGGGCTCATTGGGTCCTGAGCACGTGCGCTGAGCTGAAAACTAGAGCTTAGGGGAGCTCCCCGCCTCGGGCAGGGGTCCCCAGCTTTTTGCAGCCGCCCTGGCAGAGCCTTCCTCAACAGCGGCCCCTCGCCCTCCCCCTGGGCACCGAGGGCTACGTGAGAAGCTTCCGCGGGGTTTTCACAGGCCAGTGGCCCTTTCCCAGGGGCCCGGGCGTGCGGGGTGGCTCCGTGAGCGTGGGCACCTGGAGCAAGCGTGATGTGTGTGGTTTTCGGGTGACCGTGGGGGGAGGTTGTGCGGGGCCCTTGGGGGGTAGAGTGGACAGTGTTTGATGCTTAGTGTGGAAAATGTAACCATGAAAGCATAACGGATTTTAAGTGCTACCCACTTGAATAAACTGTAAGCGTTATTGACTGACACTTGGCATCGTTTGTGAACCCCAGTACTAGTCATTAAACAGAGCAGCTCTTCTCCAT TCONS_00183046 TCONS_00183047 TCONS_00183048 . 3' 5637 TCONS_00183046 TCONS_00183047 TCONS_00183048 . 3' 6534 EMBV3_10399 ATACCTGCAGGAATGTGTGAGGCGGGGCAGAAGGTGGGGTCATCTCCAACTGGTTCCCTC Gene BVT0101_046704 - 1 EMBV3_31340 GK000007.2:12977639-12981641 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39123 TGCCACATTGTCCTTGATCCATAAAGTGATGTGTTTCGGTGCTTCAAAGGAACCCTGGCC Gene GeneID:536981|NOL4:XM_002697681:179_cdna Constitutive 0 NULL GeneID:536981 24 GENE NOL4 MGC142595 nucleolar protein 4 EMBV3_20356 ACATGAATGCCTACAAAGTGGTGCGTGTACTGCGGTCGTGGCTGGAGTTGTCTGAACAGA Gene GeneID:505033|CST9L:NM_001045907:14_cdna Constitutive 0 NULL GeneID:505033 13 GENE CST9L CST9 MGC140113 cystatin 9-like EMBV3_25796 ATGGCATAAGGACTTGAATTTGGTGCATTGAGGTAGGGATCAAGCTGGTGGTCAGGGAGC Gene BVT0102_070185 + 0 NULL GK000016.2:39971283-40005642 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069159 TCONS_00069160 TCONS_00069155 TCONS_00069157 TCONS_00069156 TCONS_00069158 1 XLOC_041877 Coding TCONS_00069159 XLOC_041877 Coding Coding VAMP4 16:40001430-40030845 j TSS51621 4672 2 TCONS_00069159_8 125 0.0258989726027397 10 0.841504045692527 5.30452466378805e-05 6.66809965125057e-11 4.02024764269538e-05 1.11955186134243e-14 2.37774379159091e-05 1.60480135674518e-17 5.9978355382075e-12 5.14504355702311e-05 4.0771280325967e-05 2.75541953239491e-09 1.48105290633106e-09 3.18124519538368e-09 2.90954259923477e-06 5.19306096172293e-11 4.22772526966655e-10 0.00101831063735078 0.00113057231309515 0.00129046965704447 4.29084629803102e-05 2.17229429386498e-05 3.00377702972353e-09 0.000179112041930834 8.37143523123488e-05 4.94100255010715e-09 4.51981506121679e-10 3.57145721013994e-05 2.1420545440135e-09 0.000149035891792841 8.42102429657675e-05 0.000127119975967886 XM_005216916.1 VAMP4 PREDICTED: Bos taurus vesicle-associated membrane protein 4 (VAMP4), transcript variant X1, mRNA. 0.0 7047 98.85 0.846532534246575 NM_003762.4 VAMP4 Homo sapiens vesicle-associated membrane protein 4 (VAMP4), 0.0 1662 82.44 0.34375 TCONS_00069159_1 sp|Q32L97|VAMP4_BOVIN VAMP4_BOVIN Vesicle-associated membrane protein 4; 5e-48 154 96.10 0.76 0 coding 1 0 1 1 -0.0289651586374634 0.845399173942444 0.0590590038750363 0.52407302306713 GAGCGGGGGCGCAGCTGCGGCTAAGCGGCCGACGCCGGGTCCGCGCCCACTGTCTCCCGCTCCCCGCTCTCTTCTTCCGATTCCCACTCCTTCCCCCGCCCGTCCAGCGCCGCCCGCCCGGGAGAGTTGCCGGGAGCTCCCAGGGAGACTCAGGTGGTAAAGATTTATCCTGCTGGGAAGTAGAAGAGTACCTCATTAAAAAAGATGCCTCCCAAGTTCAAGCGCCACCTAAATGATGATGATGTCACAGGTTCTGTGAAAAGTGAAAGGAGAAATCTTTTAGAAGATGATTCAGATGAAGAAGAGGACTTTTTTCTAAGAGGACCATCTGGACCAAGATTTGGACCTAGAAATGATAAAATTAAGCATGTTCAGAATCAGGTGGATGAAGTCATTGATGTCATGCAAGAAAATATTACAAAGAAAGCTTATCGGATAATGCAACTGCTTTTAGCAACAGATCCAAACAACTTCGAAGGCAAATGTGGTGGCGTGGATGCAAAATAAAAGCCATCATGGCTTTGGTTGCTGTTATCCTTTTGTTAGTGATTATCATTCTTATAGTTGTGAAATACCGTACTTGATTTGATGACAGATCTTCATTAAACAAAATCTGGGACAATAATAATAAAAGGTTGCTGCATAATTTAAATGAAACTCATGTATATAACATTCACAGCTTCTTTTTCAAGAAATTATGAGGCAAGTATCACTTCAAATTGGAGCATTGAGAATGTCCAATTATCTTCCTCCCTTCCAACAAAATGTTGCTTTTAATAATTATGTTTGAGGCAAAGATAACCAGCCTTGATTTTGCCATATTCCAAGGGTCTAATTTGAAACTAGATACTTGCCAGTTCACTATTGTATATATAGTTAAACACTGATAAGGATATTTCATACTGTTATTTTAATGGCATAAGGACTTGAATTTGGTGCATTGAGGTAGGGATCAAGCTGGTGGTCAGGGAGCCTCTGCAGAGTACCAAATTATCATGCTGAAAGATGTGTATAACCATTCCATCGATATTTGCAAGATTCCTCTCATATTAACAATTGCTTTGTAAGCAATGTTCACATGTTTATAGATGTAACAAAAGCAAAATGTTGTAAATGTTGCTGCCTTCAGCTATAACTAAAAGCATTCCAGTAAACCTATTTTTGATTGTATAAGGGAATGTGTAGTGATTTTTTGACATTTGGATTATGGAAATGGGAAATTTAAAGTGTGAAAAGCATAGTATGGCATCATAAACTGGAGGTAATAAAATTATTGGAGAGCGTCATTGGAACATTTGAAAATGCCGAACATACAGCTAAAAGTCATGGTCCAGTCTGTTTTCAGTTAGCCTCCAATAAGGAGGACCAGTCCTAATGTGAGTAAATGAAATCCACAGGTAACTTTTCCCTATAATTTTCTGTTTATTAGTAGCTTTCTTCTTTAACTTCAACTAGCTATTTTACCAGAAATGCTAAAAGTAGCAAAATGACCTGCTTAGGATTTTTGATTTTTGCATTCCCTGATTATCTCCTGGGAAATGCATATTATACATACAATCAAATGTGAAATTAGTAAATAATAATGAGTATAAGAAGTCAGGAGCCTAGCTCATCAGTCGGTAACCAAATGCTAGGGTCACCATTAATCTCAGTCTGTTTTAATAATGATAAAGAGTGTTAACTTTAAAGTGTGCCAACTTTCTTGGGTTGTTTAAACATGTGAAAATGAAAATACAGTTTGCTAGTGTGTGTGTGAGGAAGTTTTATAATAAAATTGGAGGTTCTGTAGAGACTTGTGTACATGGACGTCTTCAGAATGTATATATAACTCTAAATTTGAAATAGGGTTAATAGAAAGTAGCAGTATTTAAATAGGAAAAAAAAATAGTCCATATAGGGTTTATTTCTTTGGTCGTTTTCATTCAAAATGTATGAAACATAGGATCTTTTTTTTTTTTTCAATTCTACAGGATTAGTACTAAGATACAAAAATGTTCTCTTTAGAATGAAAAGACGTTTGAAGGGAGAAAGCAGATTAAGAGATATTCAATACACCCGCAAGTTAAGAAGGTCTAAATATATTTGCTTAGCATTATAGTCCACTAAGAACATTTAAAAAGAGGTAAAGGTCTTACATACTATGGAGTGTGTTCTCTGGTTTCTCTGTCCTTTGTAAATGTCAGTTACTGTAAATAACATAATAAATACTAAACCCTTTGACAGAGGATACCCAGGAGAATGAGCATTTTTAGAATTTCATAGCTAATGTAGTTCAGGAATGGAAATGTTTTAACTGAGTGTACAGAATCAGTCCTAACATGTTTATTTTGTGTGTCCTTCATTCAGGATTGAAACTAGACTCACCAATGGTTAATTTTCTATTGGTTAGTATAGAAATTTGGCTTCTTCATATCATCTATCAGTGAAGATGATTATTTCTCAAAAAGAATCCACATTTCCAGTGTTTCTTTAATAAAGTATGCTTTTAAAGAAATAAAAACAATTTTTAAAACTTTTAAAAATGAAAAAATAAAAGGAAATATTTATATGATAATATCATATATATGTAGTTCTCTTTGTATTTAAATATATTGCTGCTGAGAATACTGGTGGTGGATATGTTACTCTGTTAGGGATCTGTTAGTGGTAGCCTGTTTAGTGGTAGGTCAGTTTATCATTTCATCCTCAGTCTTCATTAGTACTAAGACCCTTAAAGTGACGGACATGTTTATGATTTTATTATCATAACCTTGGAGACACGCACCTTAGGAACAAGAAAAATGTGTTCAAATTGATGCCAGGCCTGCCTTCCTTCCCTCCCTTAATCATTCTTTTTCTCATTCAGCTCAGATCATCCTACACTTGAAAAATGAAGTTTCCCCATCATCAAAACTCTCATTACTTAACAACAATGAAGAGGAACAGGAAAATTCCAAGTAGCTTTGTAAATACCAGTTGATACCCCAGTGAAATCAGGTCACCCCTTTTATAATGCCGGAAACAGACCCTTGTGGTTTATGTTTAACTACTGAAACCTGTTGCCCTACAGTAGTTTTGTGATAATGCTGATTAATTAGTTTTTCCTACAGATATGAGCCAGTAATACCTGTGGTCTTTTTGCTCCTCTGTCCTGATAAAGCTCACTGGAAATCACCCTCAGGTTTTTATAAACTTAGGGATTTCTTGACTAAAGAAAAGTTCAGTATTGAGAATGGAACATTATAAAATGGAGGAGGATAGGTAATAGTACACATTAAATTCAGAAATACCTTCTGTTAGCACTCCTGTGGGTGGCTTCTATATAGTCTTTATGTGCAGTTACTCTGCATTAAAAAATTATAACTTCAGCATTTTCTAATAGCAGAATTGGGCATCTTTCAATTTTGTATGACATGTGGGTATCCTGGAAATGATTATACATATACAAACTGAGAAGGAAAAAAATTGAAATTTCTCATTATCAGTACACTCCTAAACATGCTTGATGGCCTGTCAGCATTTTTATCCACACTCTCTATACTTATGTGTATGCATACTATGATTAAAAAATATGCTAGAAATTGTTTTCTCATGTTGAGAATGAGTGCCATTAGAAGCTAACTGTATTGAGTCAGTATTCCTAAGTCTAGGAAAAGCAACTCTTAGTCTGATTATATGTTTTCATGTGGAAATGTGATTGGAGTCATTGAAGTCAATTTTATTTTTCTGTGAGTGAGGAGTTAGAACATAAATCAGTCGAAAAGCATTTATACACTTTTGTTTTAGAATGCAGTAGAGTACTCATATTTGTGTAGGAAGTTGCCACAAGGCTGTGTGAAGATACTGAATCAGAAGGAGCTGGAAGGTGCCCTGTTTCTCAATCCATCCACTGTTTTTCCCATATTGTAGACAAATGGAACCATAGGGGACACAATCTTTTTATTCTGGCTCCTGTTTTAAGAAGCTGCTTGGAACAGCCAGCCCAGTGCCGTGCACCTGGCTAGATGAATGTGCCTAGGAAATCACAGACACCCTGGTGTGCTTGTTCATAAAGCGTCAGCGTCCATGGCCCTCCCTGCAGAGGTGACACGACTGACATAACTGGGGGTCTTTTGCCTTTACCAGGAGATAGTAGTGCTGTTTTATAATGGGGCTACAAAGTAAATTGCATAAATCAGTCAAATGTCAGAAATCAGACTCGAAGAAAACTCAAGCACTTGATCCTCTGCCTGGGGTATGTGTCATTGTTTTAAATTCCACACTCCTTTATTTAATCGTTTTGATAAGTGCCTTTGATGTTTTCAGATGTATGGTGGGAGATGAGCAATGTAAATGGCATGCACCCTGTGCTGTAGACTCTCAAGTCTTCATATCCATTTTCACCAGTGTTGCAAATCTTAGTCCTTGGTGTTCCTGTCAGATACGTATTTGTAGCCCCTCCATAGTAAACAGTAAAATAAACTATTTCATAGAAAACAAAATTAAGCACTTTTTGGCTTATTCAGTCTGTTACCTGTTGCCTTAACTTCATAGCGTAACTTATTTGAAATACCATCTGGCTTACCTGATTTGGGCTTCCCTGGTGATTCAGCTGGTTAATAATCTACCTGCAATGTGGGAGGCTTGGGTTCGACCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTCTGGTC EMBV3_17528 GTGTGCAGAGCATCATGAAGAAAAGCATCTTCAACGTGTGTGGGCTGCTGCAAGGAATCG Gene GeneID:616131|LHFPL2:NM_001099151:48_cdna UTR3_Alt 2 NULL GeneID:616131 10 GENE LHFPL2 MGC157216 lipoma HMGIC fusion partner-like 2 EMBV3_27605 ACCCGTCTCTATGTTACCACATCGCTGTACAGTGCCTGGGACAAGCAGTTTTACCCTGAT Gene GeneID:510154|SELENBP1:NM_001046048:76_cdna Constitutive 1 NULL GeneID:510154 3 GENE SELENBP1 MGC129063 selenium binding protein 1 EMBV3_41130 CCGTTCAGGCTGTTGGTGTGATGTCATTTGGAGACTTGTTTGAAAATTATTGCAGAAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07509 CTTCAAAGAGCAAAAGGAAGAAGAAACTGGAGAAAAGTTAGCTGTTGAAAAAGTTGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18426 CTGCGCCCGGCGGCGCCGGAGCCCGGGCCGATGGTATGGTGTATGCACTGGGGGGAATGG Variant GeneID:527321|KLHDC8B:NM_001035370:217_cdna 57^566 2 EMBV3_33852 GeneID:527321 22 GENE KLHDC8B MGC142469 kelch domain containing 8B EMBV3_02654 AATGATCCAGACTATGACCCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAGCAGTGA Gene GeneID:613882|LOC613882:XM_002688317:169_cdna Constitutive 0 NULL GeneID:613882 6 GENE LOC613882 NULL similar to Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (hNRP) EMBV3_27890 TGTGTAGGTAACTCAGAGAGAGACAGCCCCCCGTGGCTTTCATAATTCTGTGATTCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18503 TTAGGGAAAATGAGGCTGACAATCCCATGCCGTGCGGTGACTTGTACACACCTACAGTGT Gene GeneID:533403|PIAS2:XM_002697814:447_cdna Constitutive 0 NULL GeneID:533403 24 GENE PIAS2 NULL protein inhibitor of activated STAT, 2 EMBV3_16803 AACAAGGAGAAGAAAGAGGCGTTGAGCAAGTTTGTATCCTCATATGTATGCAAGAGCATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29784 GCTTTGTCTGTGGAGACTGATTACACCTTCCCAAGGTTGAAGCAAAGGAGGAGTCGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03663 TATCCCAGTCTGTTGGAGTTAGTGTTCACGCAGTCAAGAACGTCGTTTCCATTTGCTCAG Gene GeneID:519961|ATG2B:XM_002696832:641_cdna UTR3_Alt 2 NULL GeneID:519961 21 GENE ATG2B NULL ATG2 autophagy related 2 homolog B (S. cerevisiae) EMBV3_15602 GGCGGAGTTGGACTCAGACTTCCACAAGAGGCTGGATCATGGGATTCTCACATCAAATTT Gene BVT0102_384188 - 0 NULL GK000018.2:48244439-48250644 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29348 CATGAGGCCCCAGAGAAGCAGAACATAGGCGTAAGCAGTAGTCACAGTTGAGCAGAAGCT Gene BVT0102_093423 + 0 NULL GK000024.2:58101918-58119581 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140681 1 XLOC_085183 NonCoding TCONS_00140681 XLOC_085183 NonCoding NonCoding - 24:58100340-58104359 - TSS104940 3374 2 TCONS_00140681_8 107 0.1443390634262 2 0.160776505724241 0.000221788119330582 0.000703351421532733 0.00075608226660145 0.0001968981666695 0.000395822771014357 1.16620336565505e-05 9.85203087708873e-05 0.000134983161345827 7.2493760069185e-05 0 2.26159249629422e-07 0 5.81115112908339e-06 7.66804015080239e-06 2.90823993002705e-06 0 0 0 0.00099200748205181 0.000780101446348394 0.000334704193666276 0 0 0 0.000212536350742962 0.000762354248766554 0.000128505383068765 8.54046775713114e-06 0 0 XM_003584221.2 LOC788345 PREDICTED: Bos taurus tripartite motif-containing protein 64-like (LOC788345), mRNA. 0.0 1492 86.50 0.368998221695317 NM_001136486.1 TRIM64 Homo sapiens tripartite motif containing 64 (TRIM64), mRNA. 3e-122 444 70.08 0.31031416716064 0 noncoding 0 0 0 0 -0.838487894930803 0.0834630728815982 -0.0320077561189766 0.582970431551221 CATCTTACTCCGCTCTGCCTTTGGAGCTTGAGAACAGCCATCGACAGCAGGTTGACCAGCAGCCTGTGTCCCGGCCTGGAGTGAAAGACGCTCCAACGGGAATACAACCAGTTCTCTGGCTCCGGAATCCAAACTGCGATATGGGGAAGAAGAAGCCACTTGGTAGCATAAGAAAAAATTAAAAAGACCCCCCATGGAGGCAGGCAAGCAGAAACCATGAAGTGGTAGGGCCATGAGGCCCCAGAGAAGCAGAACATAGGCGTAAGCAGTAGTCACAGTTGAGCAGAAGCTGGAGGCGAGGATGGAGGCAGAAAAGGCGGCAGGAGGAGCAGCCGTTGCGATGGCTGAGGCTTGACTCACAGCTACAGCCTGCGGGGCGACCAGGCTCTCCAGGCTCTGGGGTGCCCTTGAGTCCTGACTATCTTTCCACTCTCTGCAAGGCCTTGCCTTATGACTGTTTGGGGGCTTCCGTGTGATTCCTGTCCTCTGGCTGCCATGTAACCCCTTCCAAAAAAGCTCTCCCCAGCTCAGCACCTTACATATAGTAGGTATGTGTGTGATGTGAAATGTGTAAGAATCTCATCACTTGAGACAATCTAAGAAAAAACTGCTTCCTGCAATCAAAACTTCCTACCACACCACTTACATTCTGAGGTCATGATTTGTATCCACTTTCTTGGGGATGAATATAGGGCTCTTTCCATGTCTTCCACAGTTCAGCACATTGATCTCTGTAATTGCTGAGCAAAGGATCCTATCTGGAAGAGCCTGAGCTCGTGGAGAGACACGGGCGTGTGTGTGCTCAGTCACTCAGTAGCGTCTGACTCTTTGCGACCCCATGGACTGCAGCCCACTAGGCTCCTTGGCCCTGAGATTTCCCAGGCAAGAGTACTGGAGTGAGTTGCCATTTCTTTCTCCAGGGGGGATTTCCCAACCCAGGGATGGTACCTGGGTCTCTTGCATCTCCTGCATTGGCAGGCAGATTCTTTACCACTGAGCCACCTGGGGAGCCCAGGAAAAATCTCTGGTACAAGCTGGTAGGGTGCTGGGAGGGGGACCCTAAATACAGCAGCTGCCCATCCAAAGGGTGGGTGACAATCTCTCACTTCTTTGTATCCAGCAGCTATTGAGAGCCAAGTGGGAGACAGAATATGCTGTCTGGAAGATAGGCAGCCTTAAGAAATGAGAAGGACTTTAATTGTCTCTTAACTGGGCTAAATGTGCTGGGAAAGTGAAGAGACTGGTTCTCCAGGTGGAACAAGATTAGTTCTCATCTGGCACGTTTAATGGGTCAGCAGAGTCAATCGAACAAGCTCTTCCACTCCTCTCCCTCTCTGCCGCAAGCCTTTGAAAACTCATTTTATCAAAATTAAAGCTAGATTCTGCTGTCTGCTGCTGCTGCTGCTAAGTCACTTCAGTTGTGTCCGATTCTGTGCGACCCCGTAGACGGCAGCCCACCAGGCTCCCCTATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAGAAGTGAAAGTGAAGTTTTTCAGTCGTTTCCGACTCTTCGAGACTCCATGGACTGCGGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCGAGAGTACTGGAGCGGGTGCCATCGCCTTCTCCTATGCATCACTATGCTACATTAAATACCAGTGTGCTTGGACACAGTCAGGTATCCTGTGGCCTCAAATGAAGTGAAGGGCAGCAATATCCCCAGAGAAGACGCTCCAATAAATGGTCCAAAAAATGGACAATTCATGGAGATTTAAGGCAAAGGAATGGTACCAAAGGGGAGGAAAAGGCGGAAGGAAGGGAACTATATATGAGGGAACTTCCGAAAACATCAGAGAAGCTCACAGCTCCATTATCATAATCCAGAAACACTCCAATCCTACCCGGAGGCCTTTCCACAAACTGAACTAAGGGTGGGGAGGTGGTGGACAGAACATACTGACTGTTCACCTTTGTAGAACACAGAAAAAATGCTTCTTCAGACCAATACTGATACTGGCATCACTTGTGAAGATGCTTTTACAGCCCCCCAGAACCCAGCTGGAGGACTCTGCCATGTCCAGCTCTCAGCAATGCCTCCCGGAGGTGAAGGCCCGAGCTCCCCAGGATACGGCACACGCCCCGCCCATCCACCCTCCCTCCCCCGGGACTGGACGCGTGGGGTGGTCATCCTCAGACATCACACTTGCATCATCGAGGATCGCATGGTGAACGGTCATTGTCTGACTCAGAACATTGTTCATGCTGAAGTTGTTCGGCATGTGTAGGAATGCAGAGACAGGCCAGGAAGGGAGCTCTGGGTTCACGGGCTGAGGCTTCTGCATCTGTGCCAAGTCACTTGTTTCCAGCACATTTTCCAAGCCCTGGAGCAGCTCTGTGTCCAGCTTGAGGCACATCCCATTAGCTCTCCGTACATTTCTTTCAGCCTTTCTCTCTGTTGAGTCATTCTGAACACGGTCTCCTTGAGCTGTAGACGAATGTCCTTGGCCTCTTTCTTCAGGGCCTCCAGATGCAGCTGCTCCTCCTCCTGGAGCAAAATGTATATCCTCTGGTACTAAGCTGTAATCAAGAGCTTCCTTAAGGCCACATATTCCTTAAATGACTGAAGTTTTTCAGCTTCCTGGTTCAGAATTTGCATTTCTCTCATTTTCCATAAAGAGCCCATTCTCTCCAGAAGTTTCTCCCGGGATTCCTCAGCAGCCCTGTGTATCGGCCTGTGGCTGTGAGCTGCGTGCTCGGGGCGTTCAGAGCAGGCCCACAGAGCAGGGTCTGGTCAGCCTCACAGAAGAGGCCTTTGGTGTGTCACACAGACCTGCTCCTCAGAGCTGGGGTCGTGGTCAGCTCTGGCCTGCCGGCCAAAGGCTCAGACAGGGACGGCAGAAGTTGTGCCCACGGTTTATGGAGACAGCGTCCAGGAAGTAGTTCATGCAGATGGAGCAGGTGATCCCTTCTGAGGCAGCTCCTAATGAATTAATTTGGAGTACTCGGGTAATGAAATCCTTGCCGACCGCAGCGGTTGTAATGGGCAGGGACAAGTCCTGCCTGTAGGGGGCAGTATTGCAAGAAGCGAGTGGTCCTGGGCTCAGAGCGCTGGGAGCGGGACTCCGGCCTGAGTGCTTTAGTTGGAGGTCTTAGCACTGGCGTTCTGGAAAGGAAGGGAAAGTCCCAGTTGAATGAGATTTTAAAGGAATTTTACCTAGCTCCTTGGCGAAATTTAAAATTCTGCACATACACGTGCACTACAAATACACATACACAAGCACACGTGTGTGCACACAGACACACACCCCCGCCAAATGGCAAAACGTGTTTCTTTCACT TCONS_00139448 r 3' 4615 TCONS_00139448 r 3' 7938 EMBV3_08468 ACTGTGAGAACCAGCCAATGCTTCCCATCGGCTTTACGGTTTCAAGATCCATCCAATGGC Variant GeneID:539235|CSNK2B:NM_001046454:174_cdna 494^683 1 EMBV3_07566 GeneID:539235 23 GENE CSNK2B CSKN2B MGC134413 casein kinase 2, beta polypeptide EMBV3_41181 CCAGAGCAAGACCCAGTTTTCCCCACTGCCAGTTCCTCCCATCAGGAAGCTTACCCACAA Gene BVT0102_299887 + 1 EMBV3_03933 GK000030.2:81298337-81474016 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31992 GAGTGTGAGGCCCAGACAGCATGTACAATATTCACAGCAAGGATTAGAGACACCTTGTTG Gene BVV0101_011146 - 1 EMBV3_05211 GK000002.2:41115609-41361136 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31554 ACTCAGTTCCCTGGCCCTAAAATGGAAGACTGTCAGAGGACATGAATTCTGGGCTTCAAC Gene BVV0102_054786 + 0 NULL GK000017.2:64827529-64859657 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20833 CACGTACTTGTAAAGGGTCTAAAGGATGATGCTGTAGAGGTCCTAAGGAATTGACACAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12385 TCAGTTGGTTTTTACTCTTCATAGCCGCTTGGTACGCAGTAACTTGGGTGGAGGCAAAAC Gene GeneID:782633|BAG3:NM_001082471:26_cdna Constitutive 0 NULL GeneID:782633 26 GENE BAG3 MGC148719 BCL2-associated athanogene 3 EMBV3_01346 TGCATGGAATGCGGAAGGGTTAGGCCCCTTTCTACGCTTGTGCCTCATGGATCAGAACTT Gene GeneID:613762|LOC613762:XM_002690533:572_cdna Constitutive 1 NULL GeneID:613762 10 GENE LOC613762 NULL hypothetical LOC613762 EMBV3_34372 CCTGGGAGTACCCATCGCGGCCGCTTCACGGTGTTACCTGCATTCATGTCCAGCATGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17759 GCAAGCCCCTCTGTGGCTGAAATGTTGGAGTGGTTGCAGGACATTGAGAGACATTATCGG Gene GeneID:508021|MGC166151:NM_001101892:98_cdna UTR3_Alt 2 NULL GeneID:508021 3 GENE MGC166151 NULL hypothetical LOC508021 EMBV3_05711 GAACAGTGGGTGGAGCCTTTGAGCTCCGGGAAGTCACATTCTTTCTCTTTCCTTTGGGGA Gene GeneID:515669|PLCB3:XM_002699329:176_cdna Constitutive 2 NULL GeneID:515669 29 GENE PLCB3 NULL phospholipase C, beta 3 (phosphatidylinositol-specific) EMBV3_08998 TGAACCACTTCTTCTGTGACATCGCCCCCATCCTCAAACTGGCCTGCATGGACTACTCAA Gene GeneID:515090|LOC515090:XM_002686599:78_cdna Constitutive 0 NULL GeneID:515090 3 GENE LOC515090 NULL similar to olfactory receptor MOR103-2 EMBV3_02679 GATGTCGTTGGCTGGTGCCTGCTCAGTGACTCCAGACTGCTTATAGTTTATTGGACAGAG Gene BVT0102_097904 + 0 NULL GK000025.2:37918786-38042449 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147267 TCONS_00147268 1 XLOC_089327 Coding TCONS_00147267 XLOC_089327 Coding Coding NPTX2 25:38041231-38053193 j TSS109914 2610 1 TCONS_00147267_2 304 0.0298850574712644 6 0.782292450464008 0.00561288218868066 0.00355277608216731 2.42095898065213e-06 0.00615144041529885 0.000574026486845461 0.000234836949493559 0.000493736680085807 0.00086696729429155 0.00158589161090983 0.000129116684102075 4.84906159785311e-05 0.000258917385317288 0.000138507658259159 0.000699238314438991 9.22346046041876e-05 0.000293379423729568 6.31704180183025e-06 7.21649520375846e-05 0.00270531592925259 0.00309629473434432 0.00190960833516088 1.60255408546999e-08 0.000993346001477647 0.000182323291769634 0.00335606812587368 0.00429386999717645 0.0133816139528918 1.01221258225237e-08 7.16639745187785e-05 0.000345512646177356 XM_002698218.2 NPTX2 PREDICTED: Bos taurus neuronal pentraxin II (NPTX2), mRNA. 0.0 2931 100.00 0.622222222222222 NM_002523.2 NPTX2 Homo sapiens neuronal pentraxin II (NPTX2), mRNA. 0.0 1265 90.87 0.347892720306513 TCONS_00147267_2 sp|O70340|NPTX2_MOUSE NPTX2_MOUSE Neuronal pentraxin-2; 0.0 546 92.05 0.986842105263158 0 coding 0 0 0 0 -0.256940470100146 0.136874931398789 0.000630445266530749 0.992752686640839 GAGCGCAGAGGCAACGGCGGGATGCTGGCGCTACTGGCCGCCGGCGTGGTGCTCGCCGTGGCCGCCGGAGCCCAGGACGGCCCGGCGCCCAGCAACCGTTTCGTGTGCACGGCGTTGCCCCCGGAGGCGGCGCGCGCCGGCTGCCCGCTGCCCGCGATGCCCATGCAGGGGGGCGCGCTGAGCCCCGAGGAGGAGCTGCGGGCCGCGGTGCTGCAGCTGCGTGAGACCGTCGTACAGCAGAAAGAGACGCTGGGCTCGCAGCGCGAGGCCATCCGCGAGCTCACGGCCAAGCTGGCGCGCTGCGAGGGGCTGGCAGGGGGCAAGGCGCCGGGCCGGGCAGCCTCGGGCAAGGACACCATGGGCGATCTGCCGCGGGACCCCGGCCACGTCGTGGAGCAGCTCAGCCGCTCTCTGCAGACCCTCAAAGACCGCCTGGAGAGCCTGGAGCACCAGCTCCGAGCGAACGTGTCCAACGCGGTGCTGCCCGGCGACTTTCGGGAGGTGCTCCAGCGGCGGCTGGGGGAGCTGGAGAGACAGCTGCTGCGCAAGGTGGCCGAGCTGGAGGACGAGAAGTCCCTGCTCCACAACGAGACCTCGGCTCACCGCCAGAAGACGGAGAGCGCCCTGAACGCGCTGCTGCAGAGGGTGACCGAGCTGGAGCGAGGCAACAGTGCTTTCAAGTCGCCAGATGCGTTCAAAGTGTCCCTGCCCCTCCGCACGAACTACCTGTACGGCAAGATCAAGAAGACGCTGCCTGAGCTGTATGCCTTCACCATCTGCCTGTGGTTGCGGTCCAGTGCCTCGCCGGGCATCGGCACCCCGTTCTCTTATGCCGTGCCCGGGCAGGCCAACGAGATCGTGCTGATTGAGTGGGGCAACAACCCCATCGAGCTGCTCATCAATGACAAGTCACCTCCTGCTCCCACCCCAGCCTGAGGCAACCACCCATCCGTCTCCTGTCCCTCCAGTCCTGCCTTTTCCAGAGTCGCCCAGCTGCCCCTGTTTGTCAGTGACGGCAAGTGGCACCACATCTGTGTCACCTGGACGACACGGGACGGCATGTGGGAGGCCTTCCAGGACGGGGAGAAGCTGGGCACCGGGGAGAACCTGGCCCCGTGGCACCCCATCAAGCCAGGCGGTGTGCTCATCCTCGGGCAGGAGCAGGACACAGTCGGCGGCAGGTTCGACGCCACGCAGGCATTTGTAGGGGAGCTCAGCCAGTTCAACATCTGGGACCGCGTCCTCCGTGCACAGGAGATCATCAACATCGCCAACTGCTCCACGAACATGCCGGGCAACATCATCCCCTGGGTGGACAACAACGTGGACGTGTTCGGAGGAGCTTCCAAGTGGCCGGTGGAGACCTGCGAGGAGCGTCTCCTTGACTTGTAGCCACCCGCCCCTCTGTCCAGGAGGCAGGGGCCGGGCCGTTCTCCTCATGCCCCAAGTGGAACTGGGCACGAACCTCCTGCCACAGTGGGCGGGGGGCCCCCAAAGCCCCTCCCAGAGCATCTCTAAGCCTGAGGCTCTGTGGCAGCATCTGTCACCAGCTTATCTGTTCCGAACCACGATTTTGTTGGTTTGGGGCAGGGAAGAAGCCCTGAGCCGCAGGTGGACGGATTCCTGACTCCTGCCGTGGAAGGACTCCTGCTCAGAACCCCTGTGAACGCTAGTGCGCCCCAACCCTGCCCGCTGTCACGGATCCCTGGTGTCTCGTGTGCGCCGTCTGTCCGTCCCCTTCGAAGGCCGTGCATCGTCCTGCCGGAGCGGCCGTGTCCCTGGTGTGTCGCATACACCCTTGCTGTCAGCTGAGCACGCAGCGAAGCCCCGCCCTTCTCCCCCTCACCCGCCCAAAAAAGGGTCTTTCTCTTGGTGTTCTTTACGCTGTGACTCTTTCTGTCCCAGGAACTCCTGAGCTTGTAGAGGAAGGCAGGCTGTCCAGACACTGCCCTGCCTGATCTCCGAGGTGGAGGGCGCATCCACAGCTCCAGGGAGGGGGCTGTGAACAGGAACCCTGGACACAGAAGGGCCCGGGCCGCTGTCCCCCCGCCCTCTGTCAGCTTGCCCTCTGACCTGCGCTTTGGCGGAATCCTGGCTGGCTTTGAAAGGTGTCTTTCCCACTGGTGCCAAAAGTGCAGCTTTTACAACCATGCCATGTGGTTTGGAAATTTATTTTTTTTACCACCCCCACTGCCCCAAACAGAAAAGAGCAGCCATTAACCCGCCCCGGTTTTTTGACATCTTGCCCCACTGTGAGGCACGTGCTCATTTTAATTCACGTGGATTCCTGTGAGCATCCGACTGTCTCCACTATTTCCCCCAGAACTACTTCTTCAGGAAACGGATGTCGTTGGCTGGTGCCTGCTCAGTGACTCCAGACTGCTTATAGTTTATTGGACAGAGGACATCATTTATTTTAAAAGATAGATGTGGTTCAGTGGGGAAATTTATACAGCTAAATATTATATATTTTATTTTTCATACATGTTCAAAGTGCAGATCTGTGAAAGTTCCATTTGTAGGACCAAACTGACATGCCCATCCTAACACTGTATGCTACAAGAACTCTTCTGATGATGGAATTTTGATTAAAATGCACTGGAAGACAGC EMBV3_43203 CGCCCGGAACAGGCTTCTGCAGGGCTTGAGCCAAGGCCGCCGCGATGCCGCACTTCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35418 GGCAGACTGGCATCTTTGACTGCTTTGATGACATAGGGATCTGTCTCTGTGGGGCTCTCT Gene GeneID:509228|PLAC8:NM_001025325:10_cdna Constitutive 2 NULL GeneID:509228 6 GENE PLAC8 MGC140273 placenta-specific 8 EMBV3_30664 GGACCAGGAGGTAAGTTGGATTTTCTTAACCTTCTAAAGAACCATTCAGAATGCCAGTGC Gene GeneID:538419|EPS8:NM_001076102:47_cdna Constitutive 2 NULL GeneID:538419 5 GENE EPS8 MGC137738 epidermal growth factor receptor pathway substrate 8 EMBV3_00581 CCCGTGTCACCTCTTGATAAGGCCCCAAATAGTGCGTTCAGAATAAGGGTTTAGAATCCC Gene GeneID:515784|CKAP4:XM_002687658:25_cdna Constitutive 0 NULL GeneID:515784 5 GENE CKAP4 LPC-1 cytoskeleton-associated protein 4 EMBV3_17214 GATCCATCACACGAGGCTGAAGAGAACATACCACGCAGACCCAAAAACGCTGAGTGGACT Gene BVT0101_015004 + 0 NULL GK000014.2:2565615-2624757 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052627 TCONS_00052626 TCONS_00052625 1 XLOC_031526 NonCoding TCONS_00052625 XLOC_031526 NonCoding NonCoding - 14:2612085-2617071 - TSS39003 4986 1 TCONS_00052625_2 146 0.152627356598476 1 0 2.4518085462239e-11 0 1.42557630673871e-06 8.59511854023085e-19 1.27010094458495e-12 3.44436406126175e-20 1.16962080909852e-07 2.79846550773751e-07 3.40668786523438e-18 1.27419267938421e-06 1.42629989567281e-07 0 0 7.61541463989003e-10 5.32002181218259e-18 0.00621881055764562 7.44026886348124e-06 0.00384246513248969 1.5063967049212e-13 6.53177276429896e-07 2.44586026397674e-12 4.23817110227438e-05 4.99369923648954e-05 0.00338989776304962 1.67028672295633e-14 4.97915043136652e-07 1.4124031192758e-06 2.38663073242219e-17 5.55477832493174e-07 3.20047582084911e-06 XR_229807.1 LOC101907467 PREDICTED: Bos taurus uncharacterized LOC101907467 (LOC101907467), 0.0 2654 89.18 0.395707982350582 0 noncoding 0 0 0 0 -1.67301231864029 0.00923726788401088 -0.00810673165131151 0.876317204618118 CTGCTGTGAAATTCTTGACCCCCTCGGAATTCTCAGGCTAGAAGGAGGGGGATACATAAGTGAGCATGAATTGGCTTTTCCGGAGACGGCCTGGGACATGGGATATTTAACCCATCTATGTTTTCATCCGCACCTGATCAAGACCACCAAGGCAGAACGGACTTTAAGGGAGAAATAGTCGTGGACCACATGGTGTTCTGGTTCGGCCTTGCTGACTGGCAGGTGAAGACACGCCGATCCCCCTTCTCCCTCTGGGATCTGGCAGGATTTGGACAAGGATGACCTGCCTCTCCCCCGTACTGGACGCACCCACGGGCCCTGTGCTCCACCAGGACCGGAGGCCACCTTAATGCCCAATCCAGGGCCAGGTGAAGTTCCTGCAGCAGCCGCGGCTCCTCCGCCAGCTCTCCTAGAGGTCGTAGAGCCTCCACCTCGGCGGACTCCGATCCTGGTGGCAGAAGCCTCTGATCAACACTTCCAGGATCCGGCTCCAGCCGAGCCGCCCAAGTTATACCCTCCTCTCCCGGTGAGTACTGACAGGCAGGGGAGGGAGACCTTGGAATTAAGCAGAGCCTGCGCTCTGCCAGAGAGCCAGAGGGAACAAAAGAGAACACACAAGAGATTTGCAATGCTAGCTGCTGCTCTGGGAAAGTCAATCTCGGGCCCTCTGGAAAACCTCCTCTGCCCCAGGGACAGGACAGTCCTTCAACCGGTCCCAACGGAGGCCCTGGGCCCCGTTACAGCCAAACCAGTGTGCCTGGTGCTGAGGTTTTGCCCACTGGAAGAATGAATGCCCTAAGGCAAGGAAGGAAGCTCCCGCAGCTGTGGGGCTTGCTGACTTGGAAAGTAAATAGGGCTGCCGTCCCCGAGAGCCCATGGTAACCTTGAAAGTGGGGGACCAAAACATTGACTTCATGGTGGATACAGGAGCAGAACTGTCGGTAGTAACAAAACCCGTGGCACCACTGTCCGCAAAGACTACTGCTGTAACTGGGGTATCGGGAGAAGAGATGATTAAATCGGTTTGCCAGCCCAGAAAATGTCATATGGCGGGGGCGGGAGGGGCACCAAGTGATTCATGAATTCCTCTACATTCCTGGGTGCCCAGTACGCCTGTTGGGAAGAGACTTGCTCTCCAAACTAGGAGCACAAGTGACTTTCTCCCCTGAGGAGAGGCCCACCTTCCGGATGAACACTGTGACTTATTTGCTCTCTCAGTACCACCCCAAGATGAGTGGAGGTTGCATGAGCTTCCAAGGGAAGAACTGGGTGGGCCGGAAGAGCATGATAGAGAACTAACTCAATTATTCCTTGAGGTCTGGGCGGAAGACACCCCCCCCCTCCCCCGAGGCTGGCTAAACATCAAGCCCCAGTGAAAGTAGAACTCAAACTAGGCACCATCCCGGTTAGAAAGCGCCAGTACCCGCTACCGATAGAGGCCTGGGCCAGCATACTACCCCACATCAATAGATTGAAACAAGTGGGCATTCTAGTAGAGTGCCAGTCAGCTTGGAATACTCCGATCCTGCCAGTCAGAAAGGAAGGAGGACAGGACTATAGGCCTGTACAGGATCTCAGGCGAGTCAACCAGGCTACTGTGACTTTACACCCCACTGTTCCAAACCCCTACACCTTACTTAGCCTCCTCCCACCAAGGACTAAAGTTTATACTCGCCTAGACCTCAAGGACGCCTTCTTCTGCTTACACCTTGCCCCAGCCCATCTTTGCCTTTGAATGGGAAGATCCAGTCGGGGGCACCAAACAATAGCTCACCTGGACTCCCCCACAAGGGTTTAAGAACTCCCCAGCCATCTTTGGGGAAGCCTTGGCTTCTGACCTGAACTCATTCCATCCAAAAGAGTATGGATCTTGGCTCCTACAATACGTGGATGACCTGCTGCTGGCTGCCAAGACCAAGGAAAAATGTTGGGAAGGGACAAAAACACTGCTCCAGCTGCTGATGGAAGCAGGTTGCTGCTGCTGCTAAGTCACTTCAGTTGTATCCGACTCTGTGCGACCCCATAGACAGCAGCCCACCAGGCTCACCCGTCCTTGGGATTCTCCAGGTAATAACACTGGAGTGGGTTACTGGGTGTCAAAGAAGAAGGCACAGATCTACAAGGAGGAGGTAAGGTATCTGGGGTTTGTTTTAAAGAAGAACACAAGGGTCCAGACCCTAGTTGGGTCCTGTATACTGATGGCACTAGCCTGATAAAACAAGGACAGTGGCTGTCAGGTTAGCCAAAGCAGAAGGGGCCATCCAGACTGAAAAGGGATGGTAGGAATTGCCAAGTGGCAAATTATTGGTCCCGGAGGAGCTGGCACACACTCTGGTAAGCCAAACACACCAAGCGACCCACCTAGGCCATGCCGCCTGCCTACAGGTCAATGCTGCCTCTCGGCACAGACAAAAACCTCCGGGTATTCAGCTGAAAGGCACGCTGCCCTTTGAACACCTGGGAGTGGACTTCACCGAAATGAAACCTCACCGACACTACCATTGCCTGCTGGTTGTGGTATGTACATTTTTGGGATGGGTAGGAGCTTTTCGTATTTGGACTGAAAGGACATCAGAAGTAGCCCAGTGCCTGCTTAGCGAAATAGTTCCCAGATTTGGATTTCCTACCAGTATTGGATCAGACAATGGCCTGGCTTTTGTAGCTGACTCCATGGGGTCACTGAGGGTCGGACATGACTGAGCGACTTCACTTTCACTTTTCATTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGTCGGGGGAGCCTGGTGGACTGCCATCTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGTAGTACAAGTAAACAAAAGTTTAAACGTAAAATGGAAACTGCACATTGCATATAGGCCCAGAGTTCTGAGACGGTGGAATGAACCAACCGGACACTTAAAGAGACTCTCCAAGTGGATCATAGAAACTGATTGCTCCTGGGTGGACTTGCTTCCAAGGGCTCTGCTCAGACTCAGGATGACCCCACGGTCCCAAGGCTATTCTCCATACGAAACTGTGAATGGGAGGCCCCCTCCCATAATAAAAGAGGTGTCAACAAATTTGCCTCAGGTAAGGGGGGATAGGATTTCACAGAAGACGGAAGTGGTTAAGGTAATAAATTGGGTAACTAAGTTTGTACAAGAAAGGGTGCTGTTCCCCCTTGGGGAACAGATTCATGAGATTAGTGGCTTGATGACCAAGTATGGGTCAAAGATTGGAAACATGATTTACTAGCCCCTTGGTGAAAGGGCCTTTATGTTATTCTAACTACCCCTACTGCAGTTAAAGTTGCAGGTATTGCCCCGTGGATCCATCACACGAGGCTGAAGAGAACATACCACGCAGACCCAAAAACGCTGAGTGGACTGCACAGAGGGACCCCGCTGACCCTCGAAAGACGAAGACCATCCTTAATAAGAAGGAAAAAAAAGATCCTGGATGAGCCCCTTCAGGATGAAGCCACACAATCAACTCCTGCTGCTTGGCCTCATCAACGAGCACATTCCTACGCCAACTTCCACAATACCTCCACTGTTGTGTGGGGTTATGCCTCTGTCTGTGATGGATGGACTTCCCTGGTGGCTGTCACCGCTCCGCCAAGGAGATTTTAAACCACTCTGCTCTTCTCTGGGACACAATCATAACCTCTCCTTGCTCTCTGGGTGTAAGCCAGACCTACAGTCAATAGACTCGGGTCATAGGGTTACATTTGATATAAATGCCAGTGTAACAAAAGCCTAACCTACAACAACCCCTGGTAAATCTACCTTATTTACATGCTAGGTGGACAAGATCTGTGTTTCAATGGTATGAGTATATTGCTGCCTTATTCATACCCTCTATTAGGACAACAGATATTATGATTAAAGTAGAGGCCTTGACTAATTTCACAAAACAGGCCCTCCTAGATAGAACAAAAGCCATCCAAGCCTTAAATGAAGAGCAAATCCAAATAAGAAAAGCAGTAATTCAAAATAGAATGGCTTTGGACATACTCACAGCTCCTCAAGGAGGGACCTAGGCTATAATTAAGGTTGAATGTTGTGTATGCATTCCTGACTTATCTGACAATGTATCAACTGCTTTAGATGACATGAAAAACCAGGTAAAAGCAATGTCAAATGAAAACATTCCTTTCTGGACTTCGGTCCTATCTTGGGTGAAGGGCGATTGGTGGAAAACTATATTTACCATTGTTATAGTTGCCTTGATAGTTCTGCTTTGTGGATCCTGGATTTTACAATGTATTCAATATATCCTTATGAATGATGCTCATAATATGAGTTAAGAGCATCAAGAGAGGGGAATGAAGAAGGAAGCAGACATAGCTGGACTCCATCTTAGGCCAGGCTGTGAACATTAGGCTACACGCATGGTCACCCTCTCAATGGACTCTGAACTTTGTGCCCGGTGTCTATAGAAATGGTATACCAATGGAAAACCAGACCCCCGGATAAAAGAGCCTCAGGACTTGTACTTGGACTCTCCATTGTCTAAAAGAATATGCTAATTATCTCTATATCAGAACAAAGTGGTAAATTCCATTATGTTAATTGGGATATGACCACAGGCCTATTGATAATTGTCCACTGTTAACTACCTAGGCTTTAGGCAAATGAATCACGGGTTAACATTGATTGTATCTTTCTTTTCCTTTGTTCAGACTAGTTTCAGGGAATTTGGAGAGGTAGGTTTGGGCACGTACACTTAGGGTATATAAGGTTTTCACAAAAAACTGGTCGGGGTCCTTGGCTAAGAGGAGACTGCCTTGGACCCACCGGTGTAATAAACTGCACTCCACTACCTGCATTGTCCTTCTGAGTGAGTTTGTTTCCCGGAACGCATAGCTACAGCCAGCATCTTCTAATTTCATGGCTGCAGTCACCATCTGCAGTGAATTTGGAGCCTGAGAAAATAA TCONS_00052629 s 3' 7687 TCONS_00052629 s 3' 7687 EMBV3_14998 GGCGTTCTTGTTATGCATCCACGCAATGGGTTCACAGAAGACTCCAAACCTGGAATATGG Gene GeneID:535054|PELI1:NM_001078004:113_cdna UTR3_Alt 2 NULL GeneID:535054 11 GENE PELI1 MGC142485 pellino homolog 1 (Drosophila) EMBV3_31683 AGGGGCTGGAAGGATGTTCTTACCCTATCACTTACCATGACCTGCAGTAACGTTGGAAGC Gene BVT0102_083581 + 0 NULL GK000003.2:90272887-90870841 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170604 TCONS_00170610 TCONS_00170614 TCONS_00170608 TCONS_00170615 1 XLOC_103613 NonCoding TCONS_00170615 XLOC_103613 NonCoding NonCoding - 3:90341625-90438043 - TSS127434 1630 3 TCONS_00170615_1 43 0.136196319018405 6 0.983156497298194 5.24368880241629e-19 0.000106808413663821 7.51615080376311e-22 0.000263198533090273 1.93343135552294e-05 1.23486412972031e-34 2.56803614243626e-12 0.000155682570765729 7.52964951212814e-05 5.55731838302979e-39 1.97157789152693e-48 0 2.30557782555331e-10 1.16269929069352e-18 0 0 0 0 5.62388362317214e-05 0.000460355979886987 2.76943885790568e-05 0 4.83719746150361e-19 0 0.000372622135385953 0.000206109234236666 8.58832483181392e-46 0 0 3.95148517349346e-19 0 noncoding 0 1 1 1 0.0667216178000123 0.545565036826356 -0.034358687279447 0.535641701564882 GGATCAGATCCTTTACCAACACCTGCTGGGTTTGAGCAGGTTTAAGAAACTCCTGGCCCCTCTAGGGAACATACTCAGCTGAAAAGGAGTAGAGGCTGGGAACTGCTCCAGGGGCCTGGAAATTGATGAAGACGCATACAAGATGAGACAGCTGAGACTCAGAGAAGTGAGGGTAACTTGCCTGAAGCCACACAGCTAAGCATACCTGAAGGTGAAACTCTTTTAATGCTACTCAGAGGTACGGAAACTGAGGCACAGAGACAATAAGGTGCAAAGAAGGCATATCTCCACCCCAACTCATTTAGAATGGATTAAAAAATTCTTCACGAAGCATGCTCGCGTTCTGGAAAATTCAGATTTTAATTTTCTACCTCTCTTCTGCACCCAGTGGTTGAACATACAACATCCTCAACAATGCAGAAGGCTATCAATTTCACTGCACCCTTGCTAGCACTGGGCATTATTGTTATTACTGGTAAAGTTATTAGAAGAAATAAGGGGCTGGAAGGATGTTCTTACCCTATCACTTACCATGACCTGCAGTAACGTTGGAAGCGCCACTGGGAAAAGGATCACCTGCAGACAATATGCAGGATGAGTGACACACACCATCCTGTCCAATCCCTCCATCATCCTAGATGAAGGCGAACTATTACCTCCATTGTATTTATTTAAGGATTCAACAATAATTATAAGATAGTAACACAACAATGGACTCTGAACCAGAAGAAAACCTTCAATTTACAGAATCCTGGAGCATCATAACCAGAGGGACCTTTGGCCCAGCTCCCAGCACCAACTGTAAAACTCTCTTTCTTCCTCTGCCGCCTGATAATTAGGAAAGCCTCGGCAATTTGCAAAAGAACTTCAAGGTCTGTTCTGGCCCTGAGAATCCAGGACAAGGTGCACCTTGATGGGTTCTGGACCAGATCTGGGGCAGGTCCTAGGAAGGACTTGCCAAGATTCCACCTGTTCTAGACCTCCTCATGACACTTAGGGCCAAATACAATTGTCCTGAAGATTTAGCCTGGTCATTTAACAGGACTCCAACTAAAATGCATTGAGGGAAATAATTGACTTCAAAAATTAACCAGTAAAAAATACATACATATTATCAACAAGTGAATAATGGGCCAAACCAATTCTAGATTACTAATTCCTGGAGTAGAAGCAAAATGGATGGGGCATGAAGAGATACATTTTAGAGCTGAATAGCTTTGAGTAGAAATTTTGGTTCTGTCACATGAAGTGACTTGGCAAGTTAGTCACCTGTCTTTCCCTGTATCCTTATCTATAACTTAGGGAATATTCATGCCCATTTCTCTGAGGAATAAAGTAATTGATGGTGTAGGGAAAGAGTAACTAGCCAAGATGGTGGTAATCAGGCTCTTTCCCCATACTTCCTCTCACTCATGCCCCATGTTCTTTCACTCTCCTCCCACAGTCTGTAAACAATGACTTTATATTTCTATATTCAGTTGAGAGCATTTATAGCACTGCACGTGTGCATCACTCCTATATTAGCGCCACTTGAACAGCCCTTGCTGAGCACTGCGGAGGCATCAGACATTAGAGAATAAAGCATGTCTGCCTTGCTGCTGCAAGTAAAGAATGTCTTCAATTCCTACGA TCONS_00170601 TCONS_00170603 s 3' 67068 TCONS_00170601 TCONS_00170603 s 3' 67068 EMBV3_13402 CGACGTCTTCCAGAAGAGCCGTTTCGCCCTGCGCGGTGCCCCTTACTTCCGTTTCATCAT Gene GeneID:531109|TAF6L:XM_002699295:241_cdna Constitutive 0 NULL GeneID:531109 29 GENE TAF6L NULL TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa EMBV3_01149 TTGGGCCTGCACAAAGTTGATGATTGATGGTGGAGTTCTTGGCTGCTCATGGGAAGGTTC Gene GeneID:538416|ASCC3:XM_002690156:2_cdna Constitutive 0 NULL GeneID:538416 9 GENE ASCC3 NULL activating signal cointegrator 1 complex subunit 3 EMBV3_26932 TCTTCCCGGAGTCGGGTTGCTTGGGGATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAA Gene BVV0101_074719 + 1 EMBV3_43711 GK000018.2:58220106-58234380 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10174 CTGCAGTCCTCTCGGCGGTCACAAGACCCAGCATGTAGAATCCTAGCGAGTAGTGAATTA Gene GeneID:327717|NDUFV3:NM_175830:8_cdna Constitutive 1 NULL GeneID:327717 1 GENE NDUFV3 NULL NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa EMBV3_11441 TTCCCGCGAGCAGTTCACCGCGGCGTCCGGCATGGGTCAGTAAGATACAAGCTCTGATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22668 GACATGGCTGTGTCCAACTCCATCGGGAGCAATGTTTTTGACATCCTCATTGGGCTCGGT Gene GeneID:616407|SLC24A3:XM_002692137:113_cdna Constitutive 0 NULL GeneID:616407 13 GENE SLC24A3 NULL solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 EMBV3_38494 CTCCATCATCAGTTGTCTTTCCACTGGCAAAAACTCCTCAGTGTCATCATGTCACGCCCG Gene GeneID:507661|LOC507661:XM_002696746:372_cdna Constitutive 0 NULL GeneID:507661 21 GENE LOC507661 NULL similar to chromosome 14 open reading frame 106 EMBV3_18188 TTTTTCTCTTTCAAATTCATCCAAATGTGCATGTGCCTTCAAGTTGATATCAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_28233 ACCTTCTGAGGGGAAAGGTTATGTTAACCAGCCTGAGTTGTCCACCCCAAACAATCTCTG Gene GeneID:505510|RABL3:XM_002684805:179_cdna Constitutive 1 NULL GeneID:505510 1 GENE RABL3 NULL RAB, member of RAS oncogene family-like 3 EMBV3_11930 CACTGCCTGGATGACAAGGACAGTTTCTACGTGGCTTTGGACCGGGTTTCCCATGAGTGA Gene GeneID:616779|RABIF:NM_001040596:216_cdna Constitutive 0 NULL GeneID:616779 16 GENE RABIF MGC133500 RAB interacting factor EMBV3_03509 AAACCAATCCAGAATGAGGAGAGTGTGGTGCTTTTTCTGGTCGCATGGACGGTGACAGAG Gene GeneID:615191|PTPLA:XM_002692104:322_cdna Constitutive 1 NULL GeneID:615191 13 GENE PTPLA NULL protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A EMBV3_06480 CCTCCATCTGTGACATGGTGATGTATTTTGCAGGAGTGCTGATCGTTGTTGGTTCCTCCG Gene GeneID:513101|LOC513101:XM_002688661:62_cdna Constitutive 0 NULL GeneID:513101 7 GENE LOC513101 NULL similar to Olfactory receptor 7A10 (Olfactory receptor OR19-18) (OST027) EMBV3_28627 GTGTGGTTTCTGGATCTCATGTTGTATTTAGGGAGATTGTTTTCCATGATGATGTATGGC Gene BVT0102_036072 + 0 NULL GK000018.2:63894096-63903402 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087645 TCONS_00087644 TCONS_00087641 TCONS_00087640 TCONS_00087642 TCONS_00087643 1 XLOC_052560 Coding TCONS_00087641 XLOC_052560 Coding Coding ZNF583 18:63901476-63932983 j TSS65057 4361 1 TCONS_00087641_3 451 0.210731483604678 6 0.861772360820161 3.01010405350028e-05 0.00205022706062986 0.00109745008057851 0.000452206837155411 2.89975844448253e-07 1.44333767866595e-06 0.000907338633163369 0.00153907279113821 0.00232854876782141 9.01844244080935e-05 0.000230551247263512 7.76102834757631e-07 0.000513155256281105 0.000312045294892934 1.38582945315348e-07 0.000206449793544346 8.8526916582734e-07 4.44112122875578e-06 0.00145407305602766 0.00189414475273386 1.50547683779055e-07 0.000119483474321657 7.31066724141207e-07 9.15036664898685e-05 3.67922067224275e-07 3.76049464281276e-05 1.61489319752257e-05 8.15349748607906e-05 1.084123229199e-05 5.72905272224494e-05 XR_228592.1 LOC101904081 PREDICTED: Bos taurus uncharacterized LOC101904081 (LOC101904081), 0.0 3292 100.00 0.418252694336161 NM_152478.2 ZNF583 Homo sapiens zinc finger protein 583 (ZNF583), transcript variant 0.0 1323 81.76 0.302224260490713 TCONS_00087641_3 sp|Q96ND8|ZN583_HUMAN ZN583_HUMAN Zinc finger protein 583; 0.0 701 66.26 0.997782705099778 6 coding 1 0 1 1 -0.22817259677272 0.398952197935909 -0.0122516125908814 0.83168821968135 CTGCCCGCCCGGGCGCCGCGGCCCCTTTGTGAGCCCGCCGCTGGCGGCGAGATCGAGTCCCCGCCCCGGCCGCGGGCCGCTCGGCGCCGGGCGAGGAGAGCTGTGTTTTCTCTGAACACTGCTCAGAGAGGAGCCAGAAGGAGGAGGGCAGAAGAGCTGTCATAATTTCTTAAAGCCATGTCCGAGGATCTGGTGACATTTAGGGACGTGGCTGTCAATTTCTCGCAAGAGGAGTGGGAATGGCTGAACCCTGCTCAGAGGAGTCTGTACAGGACGGTGATGCTGGACAACTACAGGAGCCTGGTATCGCTGGGCGTTTCGGTTTCTAAGCCGGATGTGATCTCATTACTGGAGCAAGGAAAGGAGCCCTGGATGGTGAAGGAGGAGGGGCCGAGGGGAGCATGCCCTGGTTGGGAGTATACATTTAAAAATAAGGAATTTCCATCAAAGCAAGTTATTTATGAAGAATCATCCAAAGTAATGATGATGGGAAGAAGCCATCTTAGTTATAACCTCAACTGCTCCAGTTGGAGAGGAGACTCTAAAAGTAAGGACTGGTTTAAGAACCAGTTGGGAACTCAGGAGGTACATGCTAGTCAGCTGATCGTCACTCATAGAGAAATCCTAAATGAGGATCACAGTAATGAATATACTAAGTCCTGGCAAACTTTCCATCAGGATACAATCTTTGATATAAAGCAGAAACGTAATAAGCATGAGCCACAAAAGAGAAGTTACCGGAAGAAACCTATCGAAATGAAACATAAGAAAGTCTATGTAGAAAAGAAACTCTTGAAGTGTAATGAATGTGAGAAGGTGTTCAACCAGAGCTCATCTCTCACTCTTCATCAGAGAATTCATACTGGAGAGAAGCCCTATGCATGTGTCGAATGTGGGAAAACTTTCAGTCAGAGTGCAAACCTAGCTCAACATAAAAGAATCCACACTGGAGAGAAACCCTATGAGTGTAAGGAATGTAGGAAAACCTTCAGCCAGTATGCACACCTTGCTCAACACCAGAGGGTTCATACTGGAGAGAAACCTTATGAATGTAAAGTATGTAGGAAAGCCTTCAGCCAGATCGCATACCTTGATCAACATCAGAGGGTTCACACTGGAGAGAAACCCTATGAATGTATTGAATGTGGGAAGGCCTTTAGCAACAGTTCGTCACTTGCACAACATCAGAGAAGTCATACTGGAGAGAAACCTTACATGTGTAAGGAATGTAGGAAAACGTTTAGCCAGAATGCAGGCCTTGCTCAGCATCAGCGAATTCATACTGGAGAGAAACCTTATGAATGTAACATTTGTGGGAAAGCCTTTAGCTACAGTGGGTCTCTAACTCTACATCAGAGAATTCATACTGGAGAGAGACCCTATGAGTGTAAGGACTGCAGGAAATCTTTCAGGCAGCGAGCACACCTCGCTCATCATGAGAGAATCCACACTATGGAGTCATTCTTGACTCTTTCCTCCCCCTCAGCCTCTATGTCCAGTCAGCTGCCAAGACCTGTAGGTTTTATCTCCTAAATATGCCTTGAATCTGACTCCATTAATCCATTTCCATTCTATTAATGTTTGTCCAATACACAATAATCTATTTGACACAGACGATGGGAAGGGCTTTCTAACCCACCCCCCTGTATTTACCATTTCCTGTTAGTAATCCATATTGCAGTCAAACTTGTATTTCAAGAGTCTGACCATATCACTTCTTCATTAAAACCCTTCACTGGCATCCCATAGGGCTTAGGGCAAGGTGCACATTGCTCAAAATAGTCTAAAAGACCCCTGCCCCCAGTACCTTGTCCCACTTTACCTTTCAGAGTCCCATTTCATGTGACCATCTCATTCCTGGGCTACTTATCAAAATTCAGAATTCATATTGCAGCAACAACTAGATCAGGGTTCCAGTTCTTACTGTTCCATTTTCTAGCCCTCTAGTTGTGGAGAAACATTTTGTCCCTTGTAAGCATCTTGTCTTTTTATTTCTATTACAGAAATAATAATGGTACTACCTCAAAAGTTAATGGGAGGATTAAATGAGATAATGCATGTAAATTGCTCAGCACAGTGCCTAGCATAATCAATAAACATTAATGTAAAATAAAAAGATAACTGTATACAAAGAAGACCTGATCATCTTAGCAGTGATTATCGATGAAATAACAAAACAGCTCAAGACCCAGGAGACTAAAGACTTTTGAGTAGAAAGAGCAGCCCTTGTTCTGAAGCTGAGTGGAAAGGGCATCCAACACAGTAGAGTTAATGCTGGAGTTCATGATGATAGAGTTAAGATGGTTGCTTCTGTTTCAGTACAAACATGGAAATATGATTTTGTTGATTAAAATTAAAAATTAACTTCATTATATATTCAACACTTTTAAGAAACCAGGTGTTAAACATCAATAAGTAAAATTTACTGAGATGTATTCGTCATTTACATTTAGACAAAGGCAATATAGTCCTCAAAAGACAGAAAACTTTAGAAGATCAATAACCAAAGAAGATTAGAAAACAAAATTTTACTCACCGTTCCTAATTCCAGGTAGATGAATCATGTTAAATCCATGTCATTTAAATAGAAAAGGTGTTAGTTTCTAAGCTGTAATTCCAAGACCAGAGGGAAAAGAAATCAAAACTATAAGTCAAAACTCATAAACATGTTTGATTTGTGTGAAATTTAAAATAAGTACCTTTAGATGGGCATTTGTTTTCCACTTTTCCACAGTTCAAACTACTGCCTGTTGTCTTACATCTGACTTGTTTTACACTTTATTACTTCCTGACTCCTGAAGGCTTCATGCAATCAGTGCTGGAACCAATTCTCATGTGACTATAAGTACAAAGAAAATGAGTGAAGTTTAATGGAGGATGAGAAGAACAGACATTTTATCCTTCTGTAGGGGAAGATTCAGTATTATACAGATGTTAGTAAGCCCCAAATTAATCTATTGATTCTTTGTACCTAACAGAATCCTAAGAATTCAAGGCCTGAAACATCGTGTTTATCAACACAAACACACAACAGACATACACATAAAGGAAACATGTAATAAAGGTGATAGCTCACTGTAGTAGCTTAACAGTATTGGTACATGAGATTCTGCTCAAAGTTATTTCTGTACAAAACAACTGTCTCATTCTTTTATCCAAATGCAAAACAGAGTCATTAGAGGATACCATACATCATCATGGAAAACAATCTCCCTAAATACAACATGAGATCCAGAAACCACACACATGGATTCTTGACTATATAAAAACATTAATGAGCTTTTATATAGTCAAAGATAGTACAAAAGGTTTTTAAACATTAGAATTTGAAAACATTAGTAAAATATGTTTAACCTATGAGATTCATATCCTTAACATGTAAGTACTCCTCCAAATCATTTAGAAAATGACACCTCTTCCCTTATGGGTAAGGGGTATAAAGAGATAACTGATGAAAATGATAAGTACCGACTCTCAAAAGGATCAGAATACAAGCTAAACAAGTGAACTACCATCTTTCAATACCGGATTGATAAAATTTGCACTGCAGAAGCACAGGAGAGGAGGTACTTCTGTGTACTGATGTAAAGGTGACTTGTCAGTATCAGAATTTTCAAGGCTTTCTTTTGCAATTAAACACGAGTTTACCCTACCATATCCTGTAACAGATAAAAGGTATCAGAAAAGAATCAAATTTTGTTAAAAGGGAAAAAAGTGCTTATTCATGAAATGTAGCAGAAACAGCTGTGACTTGAAATGTCTGCCTGATGGATTTCACTAATGGCACGTCAAGTCTGTCCAAAGGTCCCTAGAGAAGCTCATGCTCTAAGTTAGCTTGTGTAGAGGCTGGAGGTAACAATGACAAGACAGTTTATATGATTTTTTATGTGAAAGTTATGTTAGTATCCCTACCAAAGCTTTCCCATTGCACTCGTCTGTAAGTAAAGTAAATTGGATCCGTCTTTCACACCATTCAGAAAGATTAGTTCTAGGTGAATAAAATCCTAAATGTTAAAGTATTGGGAGAAAACAGAATAGGATATGCCTATGACTTTGCTGTTGGATACATCTTCCTAAACTAAACAAAAACGAAAGCCACAAAGTAAAGATTAATGAACAACTTGATTGTATCAAAAGTTGTTCGGTCACTAAGTCTTGTCCAACTCTTTGCAATCCCATGGACTGCAGCATGCTTTTAAAAAGACAAAAGAAACAGAATGGGGAAAAGCTGTAATAAAATACTAAAGGAAGGATGTAAGAATACCTATAAGTAGGTAAAGGACAACCAAGGGAGAATAAAAATGAACAAAGGATAATAATGGGTAAGTCAGAAGAAATGCAGACCGCTGACACTGAGTCCC EMBV3_36128 CCACTGCTTTCCCTTGCGTGTGCAGACACCTGGATCAATAAGTTGGTGCTTTTCACCTTG Gene GeneID:614143|LOC614143:XM_002693703:383_cdna Constitutive 0 NULL GeneID:614143 15 GENE LOC614143 NULL similar to olfactory receptor Olr446 EMBV3_13492 ATTCCGGCCAAGATGTTCATGTAGTGTTGAAGCTCTCCAGCACAGCAGGCAGAAAATGAA Variant GeneID:526612|NSFL1C:NM_001034557:1162_cdna 565^821 2 EMBV3_31263 GeneID:526612 13 GENE NSFL1C MGC128316 NSFL1 (p97) cofactor (p47) EMBV3_31443 AGTTAAGCGCTGGCTTTCACTTTGCCCCTGGTGTCTTTGTCCAGACCTCAGTACATCCTC Gene GeneID:533332|RAB38:XM_002699047:101_cdna Constitutive 0 NULL GeneID:533332 29 GENE RAB38 NULL RAB38, member RAS oncogene family EMBV3_34098 CACAATGGAAGATTTCTTCACAATGGTGACCTAAACTGGGTCTTACAGTTTGAACAAGGA Gene BVT0102_144542 - 0 NULL GK000004.2:34172132-34503663 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181291 1 XLOC_110572 NonCoding TCONS_00181291 XLOC_110572 NonCoding NonCoding - 4:34241556-34243941 - TSS135724 2385 1 TCONS_00181291_1 62 0.113207547169811 1 0 0.000365611696949846 0.000317656893821967 0.000237576721311043 0.000135311071977888 0.000126660519972325 3.44956977984597e-05 0.000112973697061384 8.6798798464945e-05 0.000135605762539161 0 0 0 6.23581894130907e-05 1.34908483568711e-05 0 0 0 0 0.000189014103973569 0.000269892546380441 0.000138609989905201 0 0 0 0.000394869734291327 0.000227903023467116 0.000507799325054564 0 0 0 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 1e-111 408 93.41 0.113626834381551 0 noncoding 0 0 0 0 -0.0903326128987593 0.674521579488412 0.0164648767595564 0.74601103258483 TGCTGCTGCTGCTAAGTCGCCTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACAGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGTCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCAGGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCTGACTCTTAGCGACCCATGGACGGCAGCCTACCAGGCTCCTCTATCCATGGGATTTTCCAGGCAAGAGTACTGGCGTGGAGTGCCATTGCCTTCTCCCTTTCAGAAGCTGGAGACTTACAAAGGGGTAGATGGGTTAACATAAAAGTTCCCTTTAAATTTTTAGCCTGCAAGTTTCTAGGCACTTGCCTTTATAATATAAATTAACCAAATTTCTGTTTGTTTTTTTTTTTAATATTTGGAATTCATATTTTATTTCTCTTCATGGTTTAAATAAATTTTCCTTGTTCAAACTGTAAGACCCAGTTTAGGTCACCATTGTGAAGAAATCTTCCATTGTGTTAGTCTGTATTTATTCCCCTTGACACATTCATGATCATATAGTTCAGACTTCCATTTATAAAAATCCCTTACATTTATTCAGTAGCACAAAATATTTTAAAGCCTATCTACCAGTATTAATCATAAGTGTGGTTTAAAAATTGCTAAATGGTCATTCTGTGCAGACTCAAACTACTTGATTCCTTTTTAATACTACAGTCTAACTGTCTAGTTCCAATTATGCCCCACATATTAACTTAATATATCTCAAGAAACGTTATAATTGTTATCCAAGTTGAATCATTGGAAGAATGTATGATGCCAGTTAATTTAAAAGTCCAGTTCTAAAATCATATACTGCATCTTTAGTCAGGTATTTTGTCTTTCATTTAGCGATACTTTCACTTTCTTCAATGTCTAAAGGCTTTATAATATTAATGCCAAACTTTAGCATAGACTAGGTATTCCAAAGACTTAGGATCAATTAAGTATTTAGCATTTCTGAATCTTGAAATAGCTTGAACCACTATTTTTATTTTAATCTAAATTTTAACAAATACAAATTTATGACTTTATATGAAGACCATGAAAGCATGGAATGACATTGTATTACAAGTCATAGCTATATGGAGTATTGAAGGATCATCAAGAAATTGTATTGCGTAGTACACGGTGCCTGTTTTCCAGGGCTTAAATAGTTTTGTCAAATTTTTTAGATAACTTTCCATATCCAAATATTTGACTCTGTTGGGCTTGATTTGGGGATTAGAAAACTTGAATCCCCTTGGAGGTAAACACAATTATTGTATGAGAACTTCTCACTAAATATATTTAAAAGCATTTTCTGTTCCACTTGAAGGCTTACTAAGGGTTTAGGAACTCTAGCATATGTCTTTTAATGTTCTTGAATAAATACTGTTGTTTTGTCCTCACCCTGAAGAGATAGTCTAACTGTACTTGGTTGATAATGGCTCAATAGAAATGAAAGTAAATAGTCTTCTCTCTTAAGAGTTTTTTTTTTCCCCAGAGAACCAAATCATCATTCCAATGTACTACATAAACTGTGAATATGAATAAATACCTTTAAATCAAAATTTAATCTAATTACTTCAGAATATTCTTGATAGGATGGATCAGTCAATCCCAGCTACAGGCAAATAAATCACATCCTGACTGCCCTGGTCTCTAGTCTTGACAATGTTTTGTGCTGGAAAGTAACTGAAGGACCATGTTTTAACGATGTCTTCTCTTTCTCTTTATTGCTATCTTGTCTGTGCCCTCATTTTCTCCTCTTCATTCAACTTAGAATGAAAGACATTAATTGTTCTGAAGTGGGCTATTATGAATTATCTTTTACTTTGTATTGATCGATAGAGCAGTCTGCATGTTTCTCCTCTACTGAATTACAATCTCTCTTAGTCTCCCAGGATAAAAGGTTTGTATTTTATTACAATAGAAGTGACAGCATTTCAATGTATACTGTTATCTCTTTATTGTTTTTCAGCAAATGATTTCATTAAGAAGCACCTTCTCCACATCTGTTTCTTCCTCATAGGAGGAATCTGTTTTTATCAAGTCACAAGTTTAACAACTTTGGTGATTGTTTTTCACATTAACTCATGAAATGACTCAGGAATGACTTGTGCATGTCTTAGAAATTGACCTAGTCAAGTCACAAGTGATAGAATGGAGTCCAAACTCTCATGTTTTAGACTGTATTTTAGGAATCTTATTTAGAGTTTAGAAAATAATAATTGTCATTCAAAATCTATCTTGATTACTAAATATGGATAGAAAATTATAACTTCATCTTGAAAAAGGTTCATTGTAAAGTTTGCAGTTATTTCTGGTGCTAATTTGAATTTTTAAAATAAAAGTATTCTTTTGTGAA TCONS_00183665 TCONS_00183666 r 5' 220260 TCONS_00183665 TCONS_00183666 r 5' 220260 EMBV3_30270 AAACGCGTGCCTTCACAACCATTTTGATTCTCTTCGCTGTCTTCATCATCTGCTGGGCCC Gene GeneID:517696|GPR63:XM_002690174:14_cdna Constitutive 0 NULL GeneID:517696 9 GENE GPR63 NULL G protein-coupled receptor 63 EMBV3_20368 CCTTCCCTCACCTCTGACGACCAAGCTGCTACAGTAAAGGGCAACAGAGATGGAACAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39320 TGTTGGAGCACTCCTTGAGCTATTGAAGATCCCCTGACTGTTACCTGGGGAGGGGTTCCT Gene GeneID:535933|LOC535933:XR_083830:1470_cdna Constitutive 0 NULL GeneID:535933 13 PSEUDO LOC535933 NULL similar to pantothenate kinase 2 EMBV3_06193 CCGTGACTCCAGCCACTGCCCCAGCGTTATTTTTGTAATAGATCAAGAGGTCAACAGCAG Gene GeneID:504307|NUP188:NM_001101838:25_cdna Constitutive 0 NULL GeneID:504307 11 GENE NUP188 KIAA0169 MGC157277 nucleoporin 188kDa EMBV3_37466 GACATCAATCTTCTGGAAGGGGAGTTGGTGGCTGTGATCGAACAAAAAGATCCACTGGGG Gene GeneID:618404|LOC618404:XM_002688091:148_cdna Constitutive 0 NULL GeneID:618404 6 GENE LOC618404 NULL similar to dynamin binding protein EMBV3_34676 GCCGGTGCCACTGCGCGTCTGTGCGAACAGATCCCTAGGGTTATTTTCAAGATGGACTCA Variant GeneID:510933|AARS:NM_001101075:94_cdna 56^160 1 EMBV3_35627 GeneID:510933 18 GENE AARS NULL alanyl-tRNA synthetase EMBV3_06671 GGCATTTCGATCCCTTCAGCCCTGTGAATGGGTCACACAGCAATGCTTCATACTGGGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38986 CAAACTGCTGATTCCCGTGACCTGTGAGTTTCCACGCCTGTACACCATTTCCGAAGGCTA Gene GeneID:510915|OIT3:NM_001046064:305_cdna Constitutive 0 NULL GeneID:510915 28 GENE OIT3 MGC137297 oncoprotein induced transcript 3 EMBV3_07574 CCGTGAACTCCACACTGGAATCATTCAAACAAGAAAGGGTATGTCTATGTCCTTCCTGGA Gene BVV0102_278820 - 1 EMBV3_39778 GK000014.2:64034796-64169831 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07157 GATACGTTAAAGATGTATACTATAAACCCTGAACACAACATATAGTGATTGCTGGTGAGC Gene BVV0101_046997 + 0 NULL GK000006.2:57388356-57951160 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20957 ACTGGGGTCTTCTGTATAGCGGGCAGATTCTTTACTGTCTGAACCACCAGAGAAGCATGG Gene BVV0102_078711 + 0 NULL GK000004.2:57169720-57586388 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15876 TCACTTTGTGATTAAGGCATAAACTTGGTAGGCTGGGATGAACCGCGCTCCTGGTGGAAG Gene GeneID:513918|DNAJC19:NM_001034458:22_cdna Constitutive 0 NULL GeneID:513918 1 GENE DNAJC19 MGC128642 DnaJ (Hsp40) homolog, subfamily C, member 19 EMBV3_23193 GCCCCGAGCGGGCCTTCCTGTTCCAGACAAACTGCTAGGAAACTTGTGAATGAGAACTTA Gene GeneID:540674|WASF3:XM_002691841:107_cdna Constitutive 0 NULL GeneID:540674 12 GENE WASF3 NULL WAS protein family, member 3 EMBV3_20547 ATGAAGACCTACATCTTGTTATGCGGAGAAAAGCGGTCCTCCAACCTGACTCTGGAGGCT Gene GeneID:510340|LOC510340:XM_002685802:699_cdna Constitutive 0 NULL GeneID:510340 2 GENE LOC510340 NULL hypothetical LOC510340 EMBV3_32272 CGCATTGAGCTCTGGGACACAGCGGGACAGGAAGGCTCTGACTTGGATTTCTGTGGTCAA Variant GeneID:538143|RHOV:NM_001076099:181_cdna 342^781 1 EMBV3_27527 GeneID:538143 10 GENE RHOV NULL ras homolog gene family, member V EMBV3_06513 CGTGCAGGACTCGTTCAGAGACACGGGTTGCAGCGGATGTTGGTATTGTTGCTTGAAAAA Gene GeneID:539136|MEGF10:XM_002688976:4_cdna Constitutive 2 NULL GeneID:539136 7 GENE MEGF10 MGC128464 multiple EGF-like-domains 10 EMBV3_09482 ACTGCTACCAACAAGGTTCCTGAAGTGACTGTGTTTTCCAAGTCTCCCATGATGCTGGGC Gene GeneID:282536|BOLA-DQA3:NM_001079577:5_cdna Constitutive 0 NULL GeneID:282536 23 GENE BOLA-DQA3 NULL major histocompatibility complex, class II, DQ alpha, type 3 EMBV3_36701 ACAGTTGACTGCACCCTTATCCTCTAGCACCCCTCGTTAGCTATCAGTGTCTTCAACTCC Gene GeneID:767967|MGC134150:XM_002694957:97_cdna UTR3_Alt 1 NULL GeneID:767967 18 GENE MGC134150 NULL hypothetical protein MGC134150 EMBV3_35315 ACAGGTGGCTCCGCTGCTCCTGGTCACTCCCTTTATAGCCATCACTGTCTTGTTTCTTGT Gene GeneID:532527|EI24:NM_001075965:29_cdna Constitutive 0 NULL GeneID:532527 29 GENE EI24 MGC143160 etoposide induced 2.4 mRNA EMBV3_16910 ACCACAGTTACATCTACATGCCTGCCTTTTCTATGAAGACGGGAACAGAGCCATCCCTCC Gene GeneID:282352|ST8SIA1:NM_001032299:7_cdna Constitutive 0 NULL GeneID:282352 5 GENE ST8SIA1 SIAT8A ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 EMBV3_09630 AGACCCTTCTTTTTAAAAGATAAAATATTAATATTTAGAAGGGCAAAGAAGAATTATTGC Gene GeneID:281690|CHSY1:XM_002696498:70_cdna Constitutive 2 NULL GeneID:281690 21 GENE CHSY1 NULL chondroitin sulfate synthase 1 EMBV3_03115 CACGTGAATCAAGGGAAGCTGACACGAGTGTACTTGTCACGGTACTGAGTTGTCACCGTT Gene BVT0102_302722 + 1 EMBV3_13917 GK000009.2:103980955-103988907 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17206 TGCCCAGTAATGGCAAACTGTACACAAAGGTAATCAACTGGGTGCAGCGTAGCATCTGGG Gene GeneID:514940|IVNS1ABP:NM_001046184:66_cdna Constitutive 1 NULL GeneID:514940 16 GENE IVNS1ABP MGC134425 influenza virus NS1A binding protein EMBV3_30500 AACCTTGAAGCAGAGGAGCGGCAGGACCAGAAATCACCCCGGACCTCCTGCCTAGGCCGC Variant GeneID:533103|SPHK2:XM_002695198:889_cdna 254^722 1 EMBV3_09645 GeneID:533103 18 GENE SPHK2 NULL sphingosine kinase 2 EMBV3_17442 GTCTCTTGGCCCCCAGACCTCCTGTTTGATTGGATAACTGCATTTTTATACTGAGCACGT Gene GeneID:281063|CDH3:XM_002694831:725_cdna Constitutive 0 NULL GeneID:281063 18 GENE CDH3 CDH15 cadherin 3, type 1, P-cadherin (placental) EMBV3_23060 GCATCTCTGCATATTTTCAAGTTTTTTATCTTGCTGTGAGAGCCTATGTCGTGACTGTCG Gene GeneID:534788|UXS1:XM_002691344:158_cdna Constitutive 0 NULL GeneID:534788 11 GENE UXS1 NULL UDP-glucuronate decarboxylase 1 EMBV3_42220 GCCTTCAAATAGTGTTTTACGTTTTTTATCCTGCTGAAAAAGTATATATAAAATATCTAA Gene GeneID:536676|NAA15:XM_002694340:79_cdna Constitutive 2 NULL GeneID:536676 17 GENE NAA15 NARG1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit EMBV3_04638 CAGTTCCGATCTTTGTTGCCCTCTCCTGCTTTGGCTCCATGAATGGTGGTGTGTTTGCTG Gene GeneID:524078|SLC7A11:XM_002694373:173_cdna Constitutive 0 NULL GeneID:524078 17 GENE SLC7A11 NULL solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 EMBV3_38172 TGGGAATGGGGAACAATTACAGTGGAGGATATGGTACTCCTGATGGCTTGGGTGGTTACG Gene GeneID:539850|HNRNPH3:XM_002698859:440_cdna UTR3_Alt 3 NULL GeneID:539850 28 GENE HNRNPH3 HNRPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) EMBV3_25172 CATTCATTTCCCCCAACTTGCCCTTTACCTGTATTTACCCTCACCATCTTCAACCCCCGC Gene GeneID:535310|FKBP10:NM_001046403:169_cdna Constitutive 0 NULL GeneID:535310 19 GENE FKBP10 MGC138074 FK506 binding protein 10, 65 kDa EMBV3_19931 ACCCAGGCACTGTAACATACCAATGTCCCCTTTTGCCCTTGCCACCAGGAAGTTCACAGA Gene GeneID:616145|ADAMTSL5:XM_002689177:232_cdna Constitutive 0 NULL GeneID:616145 7 GENE ADAMTSL5 NULL ADAMTS-like 5 EMBV3_38948 AACGGCATAGATTAGTGGTACGCTTGCTGCCCAAACTCCCATCCACTAGCAGGAACGCAA Gene GeneID:613384|CD74:NM_001034735:79_cdna Constitutive 0 NULL GeneID:613384 7 GENE CD74 MGC127643 CD74 molecule, major histocompatibility complex, class II invariant chain EMBV3_13805 AAACCCCTCAGATGGCTCTCTAACTCACCTGACAAGTTTACCCGGACTCCTGCAGCTATG Gene GeneID:100137838|LOC100137838:XM_002698140:525_cdna UTR3_Alt 1 NULL GeneID:100137838 25 GENE LOC100137838 NULL similar to tripartite motif protein TRIM4 EMBV3_37249 GTGGGACACAGTAAAAGCAGTCCTAAGGGGAGAGTTCATAGCAATCAGGCACACCTCAAG Gene BVT0102_272099 + 1 EMBV3_07730 GK000010.2:9974920-9993083 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019196 1 XLOC_009876 NonCoding TCONS_00019196 XLOC_009876 NonCoding NonCoding - 10:9980341-9980828 - TSS13086 487 2 TCONS_00019196_1 68 0.997946611909651 1 0 0 0 6.33402614811586e-06 0 0 2.2734805889957e-06 0 1.39140018347525e-05 1.62015150058265e-05 7.04054545164089e-07 7.9055193986253e-06 6.07219685111842e-06 8.41676990453747e-07 1.37987945994574e-06 5.01370621573512e-06 0.000249948176076743 0.00172946456449792 0.000150516071137855 0 0 6.23352847105496e-07 4.9793916156983e-05 5.08025668992202e-05 0.000163665955010042 0 0 0 9.39198316540561e-06 1.95214065416054e-05 1.2345428339463e-05 XR_236034.1 LOC101902035 PREDICTED: Bos taurus uncharacterized LOC101902035 (LOC101902035), 9e-42 174 74.74 0.560574948665298 XM_005262092.1 TIMM8A PREDICTED: Homo sapiens translocase of inner mitochondrial membrane 8 homolog A (yeast) (TIMM8A), transcript variant X1, mRNA. 3e-29 132 71.06 0.5564681724846 0 noncoding TTTTCATTTCTAATTTTATTGATTTGGTTTTTCTACTTTTGTTTCTTGATGAGTCTGGCTAATGATTTGTCAATTGTATTTATTCTTTCAAAGAACCAGCTTTTGGCTTTGTTGATTTTTGCTATGGTCTCTTTTGTTTCTTTTGCATTTATTTCTGCCCTAATTTTTAAGATTTCTTTCCTTCTACTAACGCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTGTAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTGAGGTATGCCTGTTTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGTCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCGTTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGTGTTTCTCCTGTAATTGAGATCTAA TCONS_00015913 TCONS_00015914 TCONS_00015915 . 5' 4245 TCONS_00015913 TCONS_00015914 TCONS_00015915 . 5' 4245 EMBV3_12301 GGTGATTTGGACAGCTCCTATGTCTGAAGGTACGCTCGCTGCATTTTTGTCTGGTGCTAG Gene GeneID:513270|NUP153:XM_002697577:431_cdna UTR3_Alt 2 NULL GeneID:513270 23 GENE NUP153 NULL nucleoporin 153kDa EMBV3_36125 TCATGATTGAGTTCAGACTTTATACTGAAGCCATCTGTAAAGACATGGAGTTTTGAGCAG Variant GeneID:532838|FAM55C:NM_001081529:20_cdna 169^246 1 EMBV3_00605 GeneID:532838 1 GENE FAM55C MGC152085 family with sequence similarity 55, member C EMBV3_06872 GGACCTCCTCGCCAAGGAGGAAGAATATAAACATCCATTATCTGAAGGGACAGTTCATTT Variant GeneID:518432|TEX9:NM_001099006:64_cdna 139^282 1 EMBV3_35350 GeneID:518432 10 GENE TEX9 MGC165753 testis expressed 9 EMBV3_38288 TTCCTGGCTTTTCATCTGTCCGAGAGAAAGGTTTTTCGGCCTTCACCTGAAGATCATGAA Variant GeneID:614151|MRPL30:NM_001035443:98_cdna 193^351 1 EMBV3_13589 GeneID:614151 11 GENE MRPL30 MGC137661 mitochondrial ribosomal protein L30 EMBV3_06626 CAAGGCCAGTTGCCGCATCAACATTTGTGCTTTGAGAGGACCTGACTGCCGTTGAAGAGT Gene GeneID:534796|LOC534796:XM_002699739:182_cdna Constitutive 1 NULL GeneID:534796 X GENE LOC534796 NULL similar to RIKEN cDNA 1810009O10 gene EMBV3_01057 TAAGTGCTTCAGCCAGCGATCCAACCTCATTGCGCACAACCGCACACACACCGGCGAGAA Gene GeneID:514765|ZNF205:NM_001034473:168_cdna Constitutive 0 NULL GeneID:514765 25 GENE ZNF205 NULL zinc finger protein 205 EMBV3_18177 CTGGGCAAGTGGTGAGGATGACCATGTAGTTGCTAGAGCAGAATATGATTTTGTTGCCGT Gene GeneID:540337|PEX13:NM_001076212:164_cdna UTR3_Alt 2 NULL GeneID:540337 11 GENE PEX13 MGC142571 peroxisomal biogenesis factor 13 EMBV3_01156 TTGTTATTAATGAAGATCGTAAAATACCAAATACATATTCAAGAGCGAAAAGAAAGTGGG Variant GeneID:513081|RPF1:NM_001083417:35_cdna 641^905 1 EMBV3_19847 GeneID:513081 3 GENE RPF1 BXDC5 MGC140358 ribosome production factor 1 homolog (S. cerevisiae) EMBV3_15078 AGGATGGAACTCTGGTTAAAGCCACTCTTTTGCTGTGCACAGATCTGTTCTATCTGCTTC Gene GeneID:281124|DPYD:NM_174041:108_cdna UTR3_Alt 2 NULL GeneID:281124 3 GENE DPYD MGC179396 dihydropyrimidine dehydrogenase EMBV3_15567 TCCCCTCTGCCAGTGATCCCGCACCAGAAGGAGCCTTCCTATCAAAGACCTCACCGTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00747 GTGAATGACCTTCCTAGAGCACTTGAACAGGACACTGATGAAATTCAAGTTAACTATCCT Variant GeneID:522230|C13H20ORF7:XM_002692036:36_cdna 549^746 2 EMBV3_04368 GeneID:522230 13 GENE C13H20ORF7 NULL chromosome 20 open reading frame 7 ortholog EMBV3_23948 GGTGTACGTCAATATCAGTCACCCCGACATGGTGGACTACAGGAGAGGAAAGACCTTCTT Gene GeneID:529757|LTB:XM_002697371:378_cdna Constitutive 0 NULL GeneID:529757 23 GENE LTB NULL lymphotoxin beta (TNF superfamily, member 3) EMBV3_29854 CATCTCAGGAAGATGCAGCTCAATGGCAAAGGATTCCAAGATCCCTGTACGAAGGTCCAC Gene GeneID:664639|TAS2R46:NM_001046629:6_cdna Constitutive 0 NULL GeneID:664639 5 GENE TAS2R46 T2R46 TAS2R43 taste receptor, type 2, member 46 EMBV3_14697 TGAGTGCTCAGAGGCTGAAGAGGGTGCAAATGGGATCAAAGAGGAAACAGAAGGCCAGGC Gene GeneID:767947|OGFR:NM_001077019:1363_cdna Constitutive 0 NULL GeneID:767947 13 GENE OGFR MGC128900 opioid growth factor receptor EMBV3_19333 CTGCAATGTGGAGCCCTCGCTCTTCATCGACTGGTTCAGCGGACACCTCAACTTCCAGAT Gene GeneID:515925|FADS3:NM_001083691:94_cdna Constitutive 1 NULL GeneID:515925 29 GENE FADS3 MGC155279 fatty acid desaturase 3 EMBV3_17560 GGAGACAAAGTAGGCGCCAGCGAAGCCACGCTGCTGCCACCACCGCAGCCCCAGCCAAGG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 580^925 11 EMBV3_14209 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_13955 TCTTACAGGGGCTGCTTTGACTATTACAGACAGTGAAATAACTGGTGCCCAGGGTGCTGG Gene GeneID:528041|C16H1ORF14:NM_001046290:26_cdna Constitutive 0 NULL GeneID:528041 16 GENE C16H1ORF14 MGC137580 chromosome 1 open reading frame 14 ortholog EMBV3_18980 TGGGAGCTCAGTATGCATTTCGTTAACTCGTTCTTTTACTCCCTTCTGTGCCTGATTGGC Gene BVT0102_382187 + 0 NULL GK000010.2:48072868-48088908 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013828 TCONS_00013827 1 XLOC_008207 Coding TCONS_00013827 XLOC_008207 NonCoding Coding - 10:48086692-48088720 - TSS10170 2028 1 TCONS_00013827_5 174 0.194773175542406 1 0 0.000160330055851618 0.000969270503027899 0.000191650887492148 0.000247050337103915 0.000209366983386559 5.29144373701197e-05 0.000284642773674477 6.52895230993035e-05 0.000357061717130706 2.43460234327094e-05 2.25758068548818e-06 7.40300710356911e-44 7.07417540513448e-06 0.0006077150733429 0.000440299982881158 0 0 4.2477265805047e-42 9.70349950027712e-35 8.51056569486292e-05 0.000327770366653513 0.000164659752372133 0 0 0.000327640014171294 0.000386861473666708 0.000265183089613252 0 1.91486019027901e-05 5.63236480033831e-05 XR_231371.1 LOC101905358 PREDICTED: Bos taurus uncharacterized LOC101905358 (LOC101905358), 4e-28 131 70.59 0.143984220907298 NM_032811.2 TBRG1 Homo sapiens transforming growth factor beta regulator 1 (TBRG1), 1e-41 176 73.29 0.154339250493097 0 noncoding 0 0 0 0 0.436791101800583 0.360050403965456 0.0450341774458511 0.44420744142406 CCACTTCTCCCAGCAAATTTCCCCTTCTGTTCCATTTCCTTGACCACACTCTTCGGCTTGTGACATCTCTTTTATCCTCTTGTACAGTTATTCATATATCCTTGCATTTTTTGGTTTCTCAACTTTTTCTGGTGCACGCCTATTTCAGTAACAATGTATGGATATCTGTATGGATCTATCTATACATCTTTTTTTTCTTTCTGTCTAGTGCATAGTTGGTGTGTATGTACAAGGGGAGAGGGGTGGTTGGGAGCAGATTAAAAACAAGTTTGGCACAGGTTAGCGGGTGATTGCATAGTTTGGATGATATATAAAGAGAATTTAGGAAATATGCAAAAGCAGAAGAGACATGTTTGGCTGTTAATTGGTTGTGGGTGGTAAAGGAATGAAGTATGAAGTGCTTCAAAATACATCCTAGGTATTTTGTCAGGGTGACTAAGCTAGGAAAAACAAATGGTTAATGTTTTATTTTCTGTGGGCTGGAGTGAGGGATGAAGGTGGTTATTGATAGCATTAGTACTGCTTAGTGTGGATTCTTTTACATCCATTTTATATAACACCAATTCTAGATATTTTGACTTTTTTCTCCAGTGAACTTTGTATTTAAGGAATGATTTTTCTTTTCGATCCTCTTATTAGCCTGTTCAGGCTGCTATTACAGAATACAACAGGCTGAGTGGTTTAAAAATAATACAATTTTCACAGTTCTTGAAGTTAGGAAGTTCAAGATCAAGGTGCCAGTTGATTCAGTCTAGTGAGGCCCTACTTCCTGGTTCATAGATGTCAGTCTTCTTGCTGTATCTTCACATGGCAGAAGGGGTGAGGGAACTCTCTGGGTTCTCTTTCATAGGGGTACTAATCCCATCCATGAGGGCTCTACTTAATTACCTAATGATCTAGTTACCTCCCAAAGGCCCCACTTCCTAATACTCTGACAGTAGAGGTTAGAATTTCAACATTTGCATGTTGACGTCTGACAGAAAACAACAAAATTCTGTAAAGCAATTCTCCTTCAATTAAATAAAAAGAATTTCAACATTTGAATCTGAGGGTTACACAATGTCCATAGAAGTTGTTTAAGAGCAATTCACACACAGTTTTTCAGACATATGCAGCGAAGCATTTAATAAACATGTGACCACAAATAATCTCATTATCCTCAGGTTTATGTTTGCAAACTATCTCAACAGTATTTTCTTTTTCATAAATTTTAAAAAATGTCCTGTTCTCTTAAGAGAATTGGCTTGTCAACGAGTGGCTAAATTTTACTAAAAGTCCTTGAATTATAAAAATCTCACTTTCAAAAAGTCTTGGCACACCAGAAATAGTTCAATGATTAAAAGAGATGAAGTTAACAGCTAACCTACAATTAAAGGGAAAAAAAAGCAAGTACTACGTCGTTTTGTTCTTTATTTCCTTAACTTAGTATGTAATTAAGAAGTGACTCCTGAATTAACTAAGAGCCAATCAGGCACAGAAGGGAGTAAAAGAACGAGTTAACGAAATGCATACTGAGCTCCCATTCTGCCATCTTATGATGCAGTTCTGTTTCCCCTCCTCTCACTTGCAAATTACTGAAGTGTGTTTTGCCTCAGAGAGCTGGTGCCAGGTGCGGCTGATGTGTAGCAGAACTAGGGTGCAGGGTCTCCTATTTTCCCCTCCTGAACGGATGGTTACTTATGAGGCTGCTCAGTGTGGACTGGAGGCCTGGGAAGCGCCGGGTAGCCATTCGGTCGGCTCCGGCGCCGATGCTTCCCACCCGGACGACGGAGCCTTACGGTCCTCAAGGCAAAAGAAAGAGACTCAGAGGAAGCAGAGAGACGGTCAAAGATGTACCCGTGCTCAGCAACTCCTGCCTCCCTTTTCTTTCTCTAACAACTCTTTCCTCTGGTGCTGGCCGCTGAGGCAAGCCACAAAGCAGCTTCTCCGCCGCTCCGCCCGCTGTCAGGTGCCCTGGCGGCCTGCGGCCAGGGGGTCACGAGTTTGCGACGCGCCCCCGAAGCTCCAGCTCCGGGAGGCGGGAGGAGC TCONS_00013828 s 5' 0 TCONS_00013828 s 5' 0 EMBV3_15136 AGTGAAGCAACTTTTTAACAGCCTGGCCACACAGGAGGGTGAATGGAAGGCTCTGAAGAG Gene GeneID:516995|NOP14:NM_001098996:25_cdna Constitutive 0 NULL GeneID:516995 6 GENE NOP14 MGC152436 NOL14 NOP14 nucleolar protein homolog (yeast) EMBV3_11267 GAAGACTGGAATGTGGTGGAGCTCATGGTGAATGGAGAAGTTGTCTTCCGCTGCAACATC Gene GeneID:785781|C28H10orf53:NM_001168003:50_cdna Constitutive 0 NULL GeneID:785781 28 GENE C28H10orf53 UPF0728 chromosome 10 open reading frame 53 EMBV3_32065 TGCACTCCTTCCTGAGAGCTTCGGGTCCTCTGGGCGTGCCTTTACTCGTTTCGGTATCTA Gene BVT0102_107099 + 0 NULL GK000011.2:26567699-26602907 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027369 TCONS_00027367 TCONS_00027368 TCONS_00027370 TCONS_00027362 1 XLOC_015232 Coding TCONS_00027368 XLOC_015232 Coding Coding PREPL 11:26566045-26602647 j TSS19407 3446 1 TCONS_00027368_4 661 0.0281485780615206 18 0.90634135679353 0.0010752316900157 0.000528564077545392 0.00120032933935077 0.00015497135363309 0.000486276917960447 0.000241875829836492 0.000521778623334438 0.000561644421349369 0.00103198639930847 0.00059804390894229 0.00039250091145744 2.87380912891341e-08 8.67808922940132e-05 0.000193095650352817 3.98627933600498e-38 0.00158336672327352 8.67179129898841e-06 0.00184254463570428 0.000342987048038454 2.81435784774777e-07 0.000240095676426893 0.000466695668766127 0.000369011058802726 0.00205251751777361 0.000933393302862736 0.000549602251779846 0.000702159586672012 2.41843620970628e-05 0.000146143411980087 5.10723439146853e-05 XM_003586622.2 PREPL PREDICTED: Bos taurus prolyl endopeptidase-like (PREPL), transcript 0.0 2938 100.00 0.476494486360998 NM_001042386.2 PREPL Homo sapiens prolyl endopeptidase-like (PREPL), transcript variant 0.0 3070 84.88 0.781775972141613 TCONS_00027368_4 sp|Q4J6C6|PPCEL_HUMAN PPCEL_HUMAN Prolyl endopeptidase-like; 0.0 731 90.13 0.580937972768533 2 coding 0 0 0 0 -0.0277548811245862 0.844709963508194 -0.0068352977122047 0.881223081668412 CCTTTTTGTTCTCCTCTCTCCTGTTTCATCTCGAGTTCTGAAGACTAGCAAAGATCCAAAAGATTTGTATTTTGAGCAATAATGATCTCAGAAGGAGAAAAATCCATTCTTGACCACAATAAATATGGTGGAATCTGCTTAGAGCTCGTGCTAGTTGGGAGTTACGTAGAACGCGTGCTGCAAACTAGCTCTCGGCGACACTGGGTAGGCAGTGGTTCTGCTAGCTGCAGAACGCAGACTTCGGCAGGACGCGGTCGAGGTGACAGCTGCACTCCTTCCTGAGAGCTTCGGGTCCTCTGGGCGTGCCTTTACTCGTTTCGGTATCTAGAGCCAGGCTGACTTTCAATTTGCTTTGCCCATGTGTGTACCAGAATGAGTGCTGCATAGTTTGAGCCTGATAAGATTGACCTTACTAAAGAGACATTTAAGTTACATCTGCCAAGAAGTATGACTTGAATGAAACTAACTTGTACAAGTTTTCAATACTTTTAGCCTGAGTTATCAGCTGTCTGCAGTTATTTGTAACCAGTTATTTGTAACCACAGCCCCAAAGGGGAAAGTTAAGAACTGCAGATCTTAGATGCTCTGAGAACCCACACTGTACAGTCATCCCTATGAAAATCATTCATGTGCTGGCAGCCCCTAAGGGAGCGTAAACCAGGGACTTTGATACCATGCAGCAGAAGAGCAAATTGTTTCTCCAAGCTTTGAAGTATAGTATTCCTCATCTTGGGAAATGCATGCAGAAAGAGCACTTGAATCACTGTAACTTCGCTGATCGTTATTACCATAGAATAAAATTGAAAAAATATCACCTAACCAAGTGTCTGCAGAATAAACCCAGCATCTCAGAGTTAGCAAGAAACATCCCAAGTCGGAACTTCTCATGTAAGGACCTATTGCCCTTAAAAAGGGAGGATTTGAGAAAGCTACCCTTGAACTTACCTGGGTTTTTATTGTTGAGGACAGAACTTAAACCAAAACCNNNNNNNGAATACGAAATCATCAATGCAGAGATTAAACATGGTGGTTTTGTTTATTATCAAGAGGGCTGCTGCTTGGTTCGTTCCAAAGATGAAGAAGCAGACAATGATAACTATGAAGTTTTGTTCAATTTGGAGGAACTTAAATTAGAGCAGCCCTTCATTGACTGTATCAGAGTTGCTCCTGATGAAAAATATGTAGCTGCCAAGATAAGAACTGAGGATTCTGAAGCATCTACCTGTATAGTTGTGAAGCTCAGTGATCAGCCTGTAATGGAAGCTTCTTTCCCAAATGTGTCTAGTTTTGAATGGGTAAAAGATGAAGAAGATGAAGATGTTTTATTCTACACCTTCCAGAGGAACCTTCGCTGTCATGATGTATATCGAGCCACTTTTGGTGATAACAAACGTAATGAACGTTTTTACACAGAAAAAGACCCAAGTTTTTTTGTCTTCCTTTATCTTACAAAAGACAGTCGTTTTCTCACCATGAATATCATGAGCAAGACCACTTCTGAGGTGTGGTTGATAGATGGCCTGAGCCCTTGGGACCCACCAGTACTTATCCAGAAGCGAATCCATGGGGTCCTTTACTATGTGGAACATAGAGATGATGAGTTATACATTCTCACTAACGTTGGCGAGCCTACAGAATTCAAGCTAATGAGAACAGCAGCTGATACCCCTGCTATTATGAATTGGGATTTGTTTTTCACGATGAAGAGAAATACCAAAGTTGTAGACTTGGACATGTTTAAGGATCATTGTGTTCTCTTCCTGAAGCATAGCAATTTACTTTATGTTAACGTGATTGGTCTGGCTGACGATTCAGTTCGGTCTCTAAAGGACGGAAAATTAGTGCCAATGACTGTTTTCCATAAAACGGATTCTGAGGACTTGCAGAAGAAACCTCTCCTGGTACAAGTGTATGGAGCTTATGGAATGGATTTGAAAATGAATTTCAGGCCTGAAAGGCGGGTGTTGGTGGACGATGGCTGGATATTAGCATATTGTCATGTTCGGGGAGGTGGTGAGTTAGGCCTCCAGTGGCACGCTGATGGCCGGCTAACTAAAAAACTCAATGGCCTTGCTGACTTAGAAGCTTGCATTAAGACGCTTCATGACCAAGGCTTTTCTCAGCCAAGTCTAACAGCCCTGACTGCTTTCAGTGCTGGAGGGGTGCTTGTGGGAGCATTGTGTAATTCTAGCCCAGAACTGCTGAGAGCTGTGACTTTGGAGGCACCTTTCTTGGATGTTCTCAACACCATGATGGACACGACACTTCCTCTGACATTAGAAGAATTAGAAGAATGGGGGAATCCTTCATCTGATGAAAACCACAAGAACTACATAAAACGTTACTGTCCCTGTCAAAATATTAAACCTCAGCATTATCCTTCAATTCACATCACAGCTTATGAAAATGACGAACGTGTACCTCTGAAAGGAATCGTAAACTATACAGAGAAACTCAAGGAAGCCATCGCAGAGCATGCTAAGGACAGCGGGGAAGGCTATCAAGTCCCCAATATTATTTTAGATATTCAGCCTGGAGGCAACCATGTGATTGAAGATTCTCACAAAAAGATTACAGCCCAAATTAAATTCCTGTATGAGGAACTTGGACTTGACAGCACCAGTGTTTTTGATAATCTTAAGAAATATCTAAAATTCTGAAATGCTGCTTTCATTGGGAACTGGAAACACACTGAAGTCTTTCATAGTCATATTTCCAATTATGTTCACAAAAGTGAGTTTTTTAAGTTAGTAAATAATTTTTTAAAAATTTTATTCTCCATCCAAATTTGGTTTTCATAAACAGCTCACTTGCTTATACCAATGTCTCCACTGAGGCACATGCCCCTTAACCCAGGAAAGTAATTTTCAAACCATGCTGCATAGAAGCACATAGAGAAGGGAGGGAAGGGCTGCTGACAGCAGAAATCTCCCCTTTCTCCTGTCAGAACAGCTTAGTTTTACTATGATTTTCTTTGAACAGTTTACACATCAAGGTCCTATTTCTGCTAGTGAAAAATTTTAGGCACTCTGGCAATTAAGTCATCCTCCAATTGCTATACCTACATTTTATGGACGAAGGTAACGAACATGCTTCCCATTAAAATTCATTAGATCTTTCTAATCATCCGTGCTTCCCATTAAAATTCATTAGATCTTTCTAATCATCTGGAGTCCTAGGTGCTCTGATCATCTTTTATTGATGTTATTTCAAAAAGTTACAAGTTCTTGCAAGTGATAATTTTCTTCTAAACATTTTATTATTCTTGAAAAACATTTAAGAACCTTCCCTAAAGCAGTTTCACTCAAGTTACAGAAATATATCAGAATTAATGACCATTCGGGACTTCCCTGGAAGTCCAGTGGTCAAGATTCCATGCTCCCAATGCAGGAGGCACAGGTTTGATCCTGGGCCAGAGAACTAAGATCCTACATGCCACATGGTGC EMBV3_29772 GAAGAATGCCTGCCATTGCCTTTTGTAAGTCTGTTCCTCCACACCTAATACCAGCTGCAG Gene GeneID:617849|MSRB3:XM_002687541:531_cdna Constitutive 2 NULL GeneID:617849 5 GENE MSRB3 NULL methionine sulfoxide reductase B3 EMBV3_23166 ATGGGCCTGGACACTCCATCCTTGCCAAACCCATCCAAAAGTGGCCTTAAGCACCAGAAT Gene GeneID:515494|LRP10:NM_001100371:149_cdna Constitutive 0 NULL GeneID:515494 10 GENE LRP10 NULL low density lipoprotein receptor-related protein 10 EMBV3_09998 AATCTTCCTCTGAGTTACGCCACAGCAGCCTCTCAGGATGAAGGCAACGTCGATGGACAA Gene GeneID:787344|ATG10:NM_001083531:14_cdna UTR3_Alt 3 NULL GeneID:787344 7 GENE ATG10 MGC138057 ATG10 autophagy related 10 homolog (S. cerevisiae) EMBV3_29809 CCCTGTGTCTAGAAATTGTCAGCTTGGTCCACATCAACAGAAGTCTGATTCCCTGAAACC Gene GeneID:533414|RAD54B:XM_002692818:151_cdna Constitutive 0 NULL GeneID:533414 14 GENE RAD54B NULL RAD54 homolog B (S. cerevisiae) EMBV3_15466 GAAGATGCCCAGGTTCTGCAGCTACAGTAGGAACCAGCTGGGCAGCGTGGACAGCTCTCA Gene BVV0102_228076 + 0 NULL GK000023.2:50802307-51055347 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138330 1 XLOC_084538 NonCoding TCONS_00138330 XLOC_084538 NonCoding NonCoding - 23:51029250-51030221 - TSS103620 971 1 TCONS_00138330_1 54 1 0 2.80240131124138e-05 0 0.000152486022046495 8.552163736737e-06 0.000122031183857785 0 0 6.09136543296344e-06 0.000203145399667603 0 4.7151182665649e-06 3.68247866444033e-05 0 0 0 5.44007732604966e-05 0 0 0 0 0 3.82114874227652e-06 0 5.17959011064181e-05 0 0 0 0 4.99959731141851e-06 1.23835637455548e-05 0 noncoding ACTGACATTCTGCCAGCATCAGCAATTCTCTAGATTTGGGGCTTGTTCCAAAAGAAGGCTTTGATTTTCTTCTTGGCGTTTGACCTTCGATTCCAGTCCTCCTCGAAGATGCCCAGGTTCTGCAGCTGCAGTAGGAACCAGCTGGGCAGCGTGGACAGCTCTCAGCGTGGACAGTCTCGGGTCCTCCCCCTTCAGTCTGCTGGCCTTGGGGTGGGACTCACCCTTGGCTGCTTGTGGAACAGTCCCAGTGACTCAGGAGTGAGCTGGAGCTGAGCGGGTGGTGGCGGCGGCGACTTGAAGATACAGCTTGTCTTTTCCTGAACACTTTCCCCAGTTTTAAAAAGAGTATTATGTGCATACTGTAGAAAAATTGTGAAGTTTAAGAGGGTATAAAGTATCAGGGGAAAGTGCACCACCGTGATGACAGCAGTCGGAGCCCGATCTCACCGCTTGCTTTCGTCGTTCTGTTTCTGAATCGCTTCCCTGCCTTTCAGCAAACCTTACTGCCTAGACTGGGACAGGCTCTCGCAGCAGCTCTGGACTCCCGCTGATCTTCCGTAGGAGTCAGCGAGGGTGGGTAGGGCCGTTCCGGAGCGAGGGACCCCATCTTAAGGTTCCTCACCCCACGGCCCATGCGACGCCTCCTTGCCTGTGCTACAGCTGTCACAGACTCTGCTTGTAGATTTTGGCTTACACGTTAAGTCGTTTGTATGGTTTTCTGTTTTCAGTGAGATTATGTAATTTAGGGGAATACATGCGAGTAGGATCAGAGTTCGTTAATTTTGACGTGTTAAAGGCAAAACCTTGACTCACTGTTATGTCTTGAAGATCGCGCTTTCAGAGACTCAGACACATTCAGAGACGTGTCCGTACCTTTGGTGTCGGGACTGTTGCTCTGGGTATGCTTTTCAGTTCACTTTTGTTAATGGTGTGTTCCACGAGAGGACTTTATTAACTTGATTCATTAACAT TCONS_00133692 . 5' 24927 TCONS_00133692 . 5' 24927 EMBV3_38969 TCTCTAAAGGATGGATATTTGTGAGATGTTGCTTAATATGGTCTGGAATAGTCTGCCCAT Gene GeneID:100296075|LOC100296075:XM_002698915:118_cdna Constitutive 0 NULL GeneID:100296075 28 GENE LOC100296075 NULL hypothetical protein LOC100296075 EMBV3_00728 TATCTACCTGGGATGGAGTGATAGTGACACCTTCAGAAAAGGCTTATGAGAAGCCACCAG Gene GeneID:539760|ILF2:NM_001038187:195_cdna Constitutive 1 NULL GeneID:539760 3 GENE ILF2 MGC134524 interleukin enhancer binding factor 2, 45kDa EMBV3_27166 AAGGAAGACCACAGTCCTTCGGGGAAGACACAGGCCTTGACCTTGTTCTTCAAATGGCTT Gene GeneID:534629|TPD52L1:NM_001076033:15_cdna Constitutive 2 NULL GeneID:534629 9 GENE TPD52L1 NULL tumor protein D52-like 1 EMBV3_22245 CTGTGAGAGAGACCAGATGGATGCCCTCGGCTCCATGACCCTCCAAGAACGAGAAGACAT Gene GeneID:618380|ZFR2:XM_002688935:133_cdna Constitutive 0 NULL GeneID:618380 7 GENE ZFR2 NULL zinc finger RNA binding protein 2 EMBV3_30999 GCAGGGGGTTGACTATGTTTGTATCTTGAGACTTGTACAATTGGGTCCTTAATGGAAGCC Gene BVV0102_089957 + 0 NULL GK000006.2:22004909-22642029 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26813 TCCCAGACAGAGATCTTCGCCTTCCTTTGCTGTGAGGCAATCTTTTGGCACACCTGGGAT Gene GeneID:538426|DNAJB1:NM_001033763:34_cdna Constitutive 2 NULL GeneID:538426 7 GENE DNAJB1 MGC129124 DnaJ (Hsp40) homolog, subfamily B, member 1 EMBV3_31359 TGAAACCAGGGGAAGTGTGCTTGGTTTCAGGTTTCATTATAGACTCAAAACCTCAGCCCA Gene GeneID:516065|ANKRD6:XM_002690181:55_cdna Constitutive 3 NULL GeneID:516065 9 GENE ANKRD6 MGC137780 ankyrin repeat domain 6 EMBV3_28979 TTGCAGAGCCTGAAAGGGAACAGAAACGTCGCAAAATTGATACCCATCCTTCTCCATCAC Gene GeneID:100299503|LOC100299503:XM_002684992:89_cdna Constitutive 0 NULL GeneID:100299503 1 GENE LOC100299503 NULL similar to THO Complex (transcription factor/nuclear export) subunit family member (thoc-2) EMBV3_28427 CGGACCTTAGGATCTGGAGCGCTGGCACAGACGCCTGGCCTCACCAAGAAGAGAGTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10615 GGGGCACCCTGGACCTGTTCAGCGTTGATGGTGTCTGAGGTCTTGTCTGAAGAAAAGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38785 GGAGACCCGTGTGCCCCCTCCTCCTTTCAGAGCGTTGGAGTTTCATTGTCACAGTTTTAA Gene BVT0102_136864 + 0 NULL GK000025.2:41956713-41960219 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01655 TGGGGCAAGACAGTGATCGAATACAAAACCACCAAGACCTCCCGCTTGCCCATCATCGAT Gene GeneID:282187|COL1A1:NM_001034039:32_cdna Constitutive 0 NULL GeneID:282187 19 GENE COL1A1 MGC128258 collagen, type I, alpha 1 EMBV3_36267 TCATCCTGCGTAGCTACCAAGAGGAGGAGGCAGACAGCGCCATCAAAGCCATGGTGACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00323 CCAGAGCACAATCGGCCTGGAGCCATAAAGCCGAAGAAACCTCCGCCTCCCAGGGACAGT Variant GeneID:618441|SEPX1:NM_001034810:306_cdna 359^473 1 EMBV3_22970 GeneID:618441 25 GENE SEPX1 MGC128294 selenoprotein X, 1 EMBV3_36451 ACATTGATGACCTTAAGAAATTTCTAAAGCATAATTGGATTAAAGCCTCAAGGAGAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32801 GGGTTTGAATGATGGGCTTTTGGAAGCATTGTCTCTTCTGTGTGTCTCTGGTCACAGCCC Gene BVT0102_108318 + 1 EMBV3_31902 GK000023.2:45372317-45480545 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00845 CCTCCGTCTGGTCCTGGGGTGACAGATGCGTCCCTTTCCCTTGCACAGCTTCATAAGAAA Gene BVT0102_053987 + 0 NULL GK000005.2:121140070-121176166 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193769 TCONS_00193772 TCONS_00193771 TCONS_00193775 TCONS_00193770 1 XLOC_117587 Coding TCONS_00193769 XLOC_117587 Coding Coding MOV10L1 5:121099142-121165128 j TSS144755 4030 1 TCONS_00193769_6 1184 26 0.939319542320224 4.79128343530995e-09 0.000824532929088519 0.00195377008715033 0.00160042486475472 5.0726693068272e-28 6.8068982584713e-05 5.08440206180583e-06 0.000700990488151497 0.000344048647070732 1.08063821958646e-08 3.43964489836975e-55 8.37124862718504e-13 9.14330725160442e-09 2.20218246110968e-15 2.59782795164047e-12 1.12103955167154e-10 0 1.74785100569945e-12 0.00126677029163474 5.40075910782445e-05 0.000846435915802111 2.65661231441508e-14 1.73001477779165e-05 3.53975540661669e-11 8.25058560556354e-15 0.00118505703015682 7.95602784653564e-05 1.12253728696724e-13 3.0914776103387e-13 8.38419223598115e-23 XM_001788759.4 MOV10L1 PREDICTED: Bos taurus Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) (MOV10L1), transcript variant X1, mRNA. 0.0 7268 100.00 0.999751861042184 NM_018995.2 MOV10L1 Homo sapiens Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) (MOV10L1), transcript variant 1, mRNA. 0.0 3440 81.46 0.881637717121588 TCONS_00193769_6 sp|Q9BXT6|M10L1_HUMAN M10L1_HUMAN Putative helicase Mov10l1; 0.0 2013 81.97 0.998310810810811 5 coding 0 0 0 0 -0.0646016533301591 0.554280582622528 0.0171773370308501 0.720716039714743 ATGCTGCGCCTCGCGGCCAAGGTGGTTTCCTTCTTTTGGAGGAAGGCGGACTGCCCAGAGGAGGAGGCCGGGCCTCTGGGGCCGGAGCTCGTGGAAGGTGACACCAGGTTGAAAACTGTCCAGGGTGTCGTGACAAGGTACTGCAGTGATTATGGCATGATTGATGATTTGATCTACTTCTCCAACGAGGTTGTGACTAGCAAAGTGCTTCTAAATGTCGGACAGGAAGTTATTGCGGTTGTGGAAGAAAATAAGGTGTCAAATGGACTGAAAGCAATCCGGGTGGAAGCCGTCTCGGATAAATGGGACGATGACAGCAAGAGCCACGGTGGGGGGCTGTCTGACCCCAGCCCCCGGGTGCTGATCGGGTGTGTGACCTCGCTGATGGACCGCGCAGGCTACATCAGCCAGACCACGTACTTCTCCCTGGAGAGTGTGTGTGAAGGTTTCGAGCCCTGCAAGGGAGACTGGGTGGAGGCTGAGTACTGGATCCGGCCAGGCACATGGAGCAGCGAGGCCATCTCAGTGAAGCCGCTGAGGTACAAGCGTGTGGACCGGGTCTGTGTGTCCAGCCTCTGTGGGAGGAATGGGGTGATCGATGATTGCATCTTCTTCACCTTGGACTCCCTGAAGCTTCCAGAAGGCTACACGCCGCGCAGGCATGATGTGGTCAGCGTGGTGGTGGTAGAGAGCAGCCAGTCCTGCTACGTGTGGAGGGCGCTGTGCATGACTCCGGTGCAGACGTGGGACTTCTCTCCCGCCACCGAGACTGCCGAAGAGGTCTGTGGAGCCCTTTTGCTCAAAAACAAAGGTGATATTGAAGTCACACGGATGACAAATTTTGGAACTCTGAAAGAAGGAGAAAGCAAAAATATGGTGATTTGGGTAGAGAATAAAGGAGACGTTCCTCAAAACTTAGTCAGCTGCAAGCTGGGTGGCTGGGATAAAGCTAAACAGTTCAGATTTCAGATGCTGGATAAAGCCCAGGTGTGCCCCGAAGTGTATCCTATTTGTGTTCCTGAGAAGGAGAAGGATTTTGCAGATAAAAATATTAACTCACTAGACAGCTGCGGGGAAAGCAGAACCTGGCAGACCCTGGAGAGCAGTTCGGTGAACAGCAAAGAAGTCTCTTCAGGTGACTGTGCCTGTAAAGGAGAAAATGGAGTAAAGGAGAAGAACATACCACAGAAGCAGGTGACAGAGTCCGAACCCGATGGGCTCATCCCTGCAGGGGGAGAAACTCGGATCGTGATCACGTGTGATGCAAAGAATTCTGGCCGCTGCAGGGAGCTCCTTTTGCTTTGCTTCTCCAGTTTCATAATTGGGCGATACCTTGAAGTGAATGTTGTAAGTGAGGAGGAGTCACTGATAGCCGTCCGCGAACCCTTTTCGTGGAAGAAGTCTAAAAGTTCCCAGGTGTTAGCTTCCACCAAAACCACAGTTGTCGTGACCACACAGAAAAGGAACTCGCGACGACAACTTCCCAGCTTCCTCCCGCAGTACCCGATACCAGACAGGCTTAAAAAGTGTGTGGAACAGAAAATCGACATCCTGACCTTCCAGCCGCTACTTGCGGAGCTATTAAACATGTCAAACTACAAGGAGAAGTTTTCAACTTTGCTCTGGCTGGAGGAGATTCATGCAGAAATAGAATTGAAGGAGTATAATATGAGTGGGGTCACTTTGAAAAGAAACGGGGATCTGCTAGTTCTGGAGGTCCCAGGATTGGCTGAAAGTAGGCCTTCTCTGTATGCAGGTGATAAACTGATTTTAAAAACCCAAGAGTACAACGGACACGTGATTGAGTACATCGGCTACGTGGTTGAGATTCATGAAGAAGATGTAACTCTTAAACTTAATCCAGAATTTGAACAAGCATATAACTTTGAACCAATGGATGTGGAATTTACATACAACAGGACCACCAGCAGACGCTGCCACTTTGCACTTGAACAGGTCATCCACTTGGGGGCAAAAGTGTTGTTTCCAGAAGAAATCATTTTACAGCCTCCCCAGGTGACATGGAATTGGACCCATGCGCAAGACACCAAAAGGGATGGACAGTCTACCTCCAAGAATAGAAGAGCTGTGAAGGACCAAACTAAGCATGCCCCAGAGGAGCACCAGGCAGGTGCCCAGGACACACCCGTGCCACGGGCCGCCACCACAGAGGCCAGCAGGCTGGTCAGCGGATCCCCGAAGGCAAGAGAAAAGTTTTTCAACCCCATGCTCAACGAGAACCAGAAGTTGGCGGTGAGGAGGATCCTGAGCGGAGACTGCCGCCCGATCCCCTATGTGCTCTTCGGGCCTCCGGGGACGGGGAAGACGGTGACCATCATAGAGGCCATCCTGCAGGTCTTCCATGCTCTGCCGGACAGCCGGATCCTGGTGTGTGCGCCCTCCAACAGTGCGGCCGACCTTGTGTGCCTGCGGCTGCACGAGAGCCGAGCGCTGCGTCCGGGCACCATGGTCCGTGTGAATGCCACCTGCAGGTTCGAGGAGACCATCACAGAGGCCATCAGGCCGTACTGCAGAGACGGGGAAGACGTCTGGAAGGCCTCTCGCTTCAGGGTGCTCATCACCACGTGCAGCAGCGCGGGGCTCTTCTACCAGATAGGCTTGAGAGTCGGACACTTCACGCACGTGTTTGTGGATGAAGCGGGCCAGGCCAGTGAGCCCGAGTGCCTCATCCCCCTGGGGCTGGTCTCGGACGTCAGCGGCCAGATCGTCCTGGCTGGAGACCCCATGCAGCTGGGACCAGTCATCAAGTCCAGACTTGCCATGGCCTATGGGCTGAACGTCTCCATGCTGGAGAGACTGATGTCCCGACCAGCATACCTGCGTGATGAGGATGCTTTTGGGGCCTGCGGTGCCTACAACCCCTTGTTGGTGACAAAGCTCGTGAAGAACTACAGGTCGCACTCGGCCCTGCTGGCCCTGCCGTCCAGACTGTTCTACCACCGAGAGCTGGAGGTGTGCGCGGACCCCACCGTGGTGGCCTCCCTGCTTGGCTGGGAGAAGCTGCCCAGGAAGGGCTTCCCCCTCATCTTCCACGGAGTGCGGGGCAACGAAGCTCGAGAGGGACGAAGCCCGTCGTGGTTCAACCCTGCCGAGGCCGTGCAGGTCATGCGCTACTGCTGCATGCTGGCCAGGAGCGTCTCCAGCCAGGTGTCCGCCCGCGACATTGGCGTCATCACGCCCTACCGGAAGCAGGTAGAGAAAATCAAAATTCTTCTGCGAAACGTTGATCTGATGGATATAAAGGTTGGATCCGTGGAGGAATTCCAAGGGCAGGAGTACCTGGTCGTCATCATCTCCACTGTGCGGTCAAATGAAGATAGATTTGAAGATGATAGATATTTTTTGGGATTCTTGTCCAACTCAAAAAGATTTAACGTTGCAATCACCAGACCCAAAGCCTTGCTGATCGTGCTGGGAAACCCTCATGTCCTTGTCAGAGACCCGTGCTTCGGGGCTTTGCTAGAGTACAGCATCACCAACGGCGTCTACACGGGGTGCGACCTGCCACCTGAGCTGCAGCCGCTGCAGAAGTGAGCGCCACGTCTCCTGGCGGACGGACTCCGGCCCTGCCCCCTGGGCTGCAGCAGCCACCCTCCGTCTGGTCCTGGGGTGACAGATGCGTCCCTTTCCCTTGCACAGCTTCATAAGAAACTTCAGTGCCCCTCGTAAAGCCACCTTGGGAAGCGGAGCGGCCGCCAGCCCCTCCCCAGTGGTCCCGTGGGCACCTGAGCCCCCACGGGGAGCCCCACCCACTGGCCCCTGCCTCTCCGCGTCTGCAGCCGTGCCTGGGTGTGTGGCCGCCCCTCCCTGCCCAGCAGAACCCTGTTGAAAAAGGGCGGCCAGAGGCCAGCTCCACCCCGGAGGGGTGCTGTCTGGGACTCAGGCTGCCTGGACTCCAGCCTTGGCTGCGGGTGTGGGGCCCCTGGTCTGACACCCGCTCCCCCTGCGGGCAACTCCACACCTGCCTGCCCCTGTCCTGGGAAGCCCTGCAGCTGTCACCAAAATAAAC EMBV3_43461 TCTCTCAGCCCAGTATCCAAGGGAAGAGCTCACCAGAGTGGTACGCAATGCAGGTCAAAT Gene GeneID:521795|SLFN11:XM_002695653:107_cdna Constitutive 0 NULL GeneID:521795 19 GENE SLFN11 NULL schlafen family member 11 EMBV3_40404 ACCTGGATAAGTGCTATGTGATTCCTCTGAACACTTCCATTGTCATGCCACCCAAAAACC Gene GeneID:510575|ITM2B:NM_001035093:88_cdna Constitutive 0 NULL GeneID:510575 12 GENE ITM2B MGC127350 integral membrane protein 2B EMBV3_07914 TGGGTGAAGAGTGTTCTTTAATACGGATACACACCTAGATTTTTCCGGGGACTCTACAGG Gene GeneID:507339|C7:NM_001045966:65_cdna Constitutive 0 NULL GeneID:507339 20 GENE C7 MGC137145 complement component 7 EMBV3_03693 GAAATACTTTTTAAGTTATTCATGAGCTGTATATTCACTTGTGTGGCACTCATGGTTTTT Gene GeneID:781884|MOBKL3:NM_001083526:149_cdna Constitutive 3 NULL GeneID:781884 2 GENE MOBKL3 MGC137798 MOB1, Mps One Binder kinase activator-like 3 (yeast) EMBV3_25468 GCTGGAGAAGCGGGAGCTTAAGACTGAAAGATAACAATGTAACACTATTGGTCCAGAAGC Gene GeneID:513055|RGS2:NM_001075596:8_cdna Constitutive 0 NULL GeneID:513055 16 GENE RGS2 MGC140786 regulator of G-protein signaling 2, 24kDa EMBV3_41316 GGAGTGAATGAATGAATGCAAACTTAACTCTGTAGTGGGAACATTATGGTGTGTAAGCTC Gene BVV0102_107992 + 1 EMBV3_33954 GK000012.2:45221284-46379973 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34707 CAACACCTCCCTCACGAACTCCTAATCAAGACCAACCAAAATCACCACAGAGACCTCTCG Gene BVV0102_073086 + 0 NULL GK000018.2:47476418-47532345 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086432 TCONS_00086437 TCONS_00086431 TCONS_00086429 TCONS_00086436 TCONS_00086438 TCONS_00086435 TCONS_00086434 TCONS_00086430 TCONS_00086433 1 XLOC_052146 Coding TCONS_00086437 XLOC_052146 Coding Coding ZNF585A 18:47468929-47483609 j TSS64318 643 1 TCONS_00086437_2 105 0.0808709175738725 6 0.956604673342871 0.00595124233945458 0.00188772308464883 0.00642213009846486 0.00169108014596021 0.00317274984957827 0.000344165679959139 0.000938556012396563 0.00255591509180615 0.00136253814815469 3.56843997303545e-22 1.05241897766148e-05 0.000132958392252588 0.000595227351078779 0.00118770934136661 0.00104507710371782 0.00264613068976145 0.000491868171065767 0.00200270181505297 0.00595989314810493 0.010594858455403 0.00205296138650127 0.000709587964527584 0.000594914951299034 0.000141122061467248 0.0044610184886884 0.0067434405807261 0.00025852572237532 0.000355746441879959 0.000216466304380371 1.98436705550903e-43 XM_002694957.3 ZNF585A PREDICTED: Bos taurus zinc finger protein 585A (ZNF585A), mRNA. 0.0 1122 100.00 0.965785381026439 XM_005258615.1 ZNF585A PREDICTED: Homo sapiens zinc finger protein 585A (ZNF585A), 3e-113 412 81.78 0.657853810264386 TCONS_00086437_2 sp|Q6P3V2|Z585A_HUMAN Z585A_HUMAN Zinc finger protein 585A; 2e-49 169 80.61 0.923809523809524 1 coding 0 0 0 0 -0.367084432638529 0.06785161607348 0.0534975655284969 0.342173694042228 GCTAGAGGTCTGACTGGAAGCGGAAGTGCCTCGCGGAGGGTTTTTGGTTTTGTTTTTTTTTTTTTTTTGCGGCTGTGTGGGGAGCATTTTCACACTTTATTTCCGAGAGGTCTCTGTGGTGATTTTGGTTGGTCTTGATTAGGAGTTCGTGAGGGAGGTGTTGAGTACTTTACAAGCACCATCTCATTTAATTTTCGTAATTCTATGAGGAGCCTCTGGACTAGATCTTCCTCCAAATTTCACCTCACCACTCTTCAGAGGCTCTGCTTGAGTTTATATGTGCACCAAACTTTAGTTTGCTTAGAGAATAAAGGTTGAGACCCAACATGACCATGCCAGCTAATTGGACCTCTCCTCAGAAATCCCTGGGCCTGGCTCCAGAGGAACCTGGCGGCTCATGTGAGGGATCAGTGTCCTTCAGGGACGTAGCTGTAGATTTCAGCAGAGAGGAGTGGCAGCAATTGGACCTTGATCAGAAAAACCTGTACCGGGATGTGATGCTGGAGACCTGTAGCCACTTGCTCTCAATAGGATATCAAGTTCCTGAAACCAAGGTTTTCATGTTGGAACAAGGAAAGGAGCCATGGGCACTGCAAGGTGAGGGCCCATATCAGAGCTGTCCAGGTGTTTCCTGTCACCCCTG EMBV3_17857 GACTGTGCTGGCTCCTGCCCAGGTGGAAGGGGATGGGAAAGAAGTCTACCCCTCTCCATT Gene BVT0101_044615 - 1 EMBV3_37059 GK000018.2:35124821-35136593 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07105 ATCAAATGTGCTCTAGTGTGGTGGAAGACCTTTGAGAACCTGGATGTGGTAAGCTTTCTG Gene GeneID:338044|SLC38A2:NM_001082424:58_cdna UTR3_Alt 2 NULL GeneID:338044 5 GENE SLC38A2 NULL solute carrier family 38, member 2 EMBV3_00930 CCCTGCTTTCAGGGCAAGAACTTTGCTGTATTACTAGTTGGGCGACAGCTTCCATAGTCG Gene GeneID:535421|ELMOD3:NM_001015661:119_cdna Constitutive 1 NULL GeneID:535421 11 GENE ELMOD3 MGC166404 RBED1 ELMO/CED-12 domain containing 3 EMBV3_02031 AGGGCTGAAAGGCCCCAGAACCTCCAGGATGTATTCTTTGGAATTGTTCCTCTCCAGTCA Gene GeneID:514365|XKR8:XM_002685687:338_cdna Constitutive 0 NULL GeneID:514365 2 GENE XKR8 NULL XK, Kell blood group complex subunit-related family, member 8 EMBV3_14068 ACTGTTTCCCTATTTCCTTATCTGTCTGAGGCTAGGTGTGACTCCATCACTGCCCATCCC Gene GeneID:539324|TMEM30B:XM_002691040:426_cdna Constitutive 0 NULL GeneID:539324 10 GENE TMEM30B NULL transmembrane protein 30B EMBV3_07025 CCAACCCCTTGATCCAGATGGCCGAGTGAAAATTTGGGTTTATGGAGTTTCAGGTGGTGG Gene GeneID:100336727|LOC100336727:XR_083599:52_cdna Constitutive 0 NULL GeneID:100336727 2 PSEUDO LOC100336727 NULL thrombospondin, type I, domain containing 7B-like EMBV3_29480 ACGTTAAAATCGTGTTGTACAAGTTATATTTTGTTAACTTGTTGAAGTTGATACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_31054 CACCTCCTGCCTCTGTAACAATTACCCAAGGAGATTCTTCTGGGATTTGCAAACCAACAG Gene GeneID:613853|PIP:NM_001080913:715_cdna Constitutive 0 NULL GeneID:613853 4 GENE PIP NULL prolactin-induced protein EMBV3_19472 CGGATACAATACCTATGCATCTTTTAACTGGCAGCACAATGGGAGGCAGATGTATGTGGC Gene GeneID:100337333|LOC100337333:XM_002696351:49_cdna Constitutive 0 NULL GeneID:100337333 20 GENE LOC100337333 NULL fibroblast growth factor 10-like EMBV3_36600 TCTCAAACAAAGAGGCGAGCAGTGGCTCCGGGCCAAAATCTATGCAAGACGGCTGGTGTG Variant GeneID:541118|TNRC6A:XM_002698027:226_cdna 344^520 1 EMBV3_15259 GeneID:541118 25 GENE TNRC6A NULL trinucleotide repeat containing 6A EMBV3_20142 AACGTGTACCTGCATGGGCTGAGGAACCTCTGGCAAATCCTCTTCCACATAGGAGTGGCT Gene GeneID:614905|SEC22C:NM_001046546:217_cdna Constitutive 0 NULL GeneID:614905 22 GENE SEC22C MGC134135 SEC22 vesicle trafficking protein homolog C (S. cerevisiae) EMBV3_39501 CCCCCAGCGCGCCCAGCTTCTGCGGATCAGGAGAAAATAATGAATGTCAAAGGAAAAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34932 ACAGAGCAGTAGTGGAGAAGGCCATGGGAAGAGTAGTCATTAGGACTCAGGGCATCTATG Gene BVT0102_117711 - 1 EMBV3_43259 GK000003.2:6995684-7105559 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30512 GGTCAGCCCTGAAATTTGATTAGAAACCGTTGCGCACCACACCCAAGATGAGTGTCCTTG Gene GeneID:614391|SORBS2:NM_001079787:79_cdna UTR3_Alt 3 NULL GeneID:614391 27 GENE SORBS2 Argbp2 MGC157359 sorbin and SH3 domain containing 2 EMBV3_22751 GACTCAAAAGTAGGGCATCCTTGGCCCTCCTGAAGAGATGAAATTAGTGGCAAGTGGACC Gene BVV0102_032033 + 0 NULL GK000007.2:52144489-52218127 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213437 TCONS_00213435 TCONS_00213436 TCONS_00213434 1 XLOC_130454 Coding TCONS_00213434 XLOC_130454 NonCoding Coding SNHG4 7:52205888-52209699 = TSS159892 432 0.243055555555556 4 0.887664041994751 0 0.000209341755315986 9.89695709891801e-05 0.000761402566697282 0.00108723882619692 0.0001651559221871 0.000296985397667279 0.000109531810612624 0.000379567530462043 0.0038653573528314 0.00347444191769215 0.00242696283290526 0.000458121735457047 0.00167896542884492 0.00145312363115334 0.0131390488467744 0.0166459720505624 0.0125062476824401 9.95962707544858e-05 0.000432126498240063 7.02715038878294e-05 0.00937101101803774 0.0087693045580249 0.0107986804572427 0.00113374513838111 2.82841533818874e-05 0.000217005095975225 0.00537642184313437 0.00713504257417783 0.00914882472907861 NR_038087.1 SNHG4 Bos taurus small nucleolar RNA host gene 4 (non-protein coding) (SNHG4), non-coding RNA. 0.0 780 100.00 0.997685185185185 NR_003141.3 SNHG4 Homo sapiens small nucleolar RNA host gene 4 (non-protein coding) (SNHG4), transcript variant 1, non-coding RNA. 5e-57 224 76.52 0.756944444444444 0 noncoding 0 0 0 0 0.145337385412921 0.306626955739411 0.06411184789821 0.222331499441408 CGGGGCGGGGCTCCCCTCGGCTCCCGACTGCCCTTTTCCCCTGCGGTCTCTGCCCCGGCTGCTGTGTCTCTACCGAGCTCCGGACACGTGCAGGAGCATCCAGCCGTGAACTTTCAAGCAGATGCAGCCCCAGGATGACTCAAAAGTAGGGCATCCTTGGCCCTCCTGAAGAGATGAAATTAGTGGCAAGTGGACCATCTATCTGTATGGCGTTATCAGATGCCTTTGCCTGAGTGAGAAACCTTCCTCCATTGGGACCCCAGAGGTCTGATGGCCCTTTGTGACATCCAAATAAGTAATGTATGTAGTCCTTTTGTCCTGAAGGTCCAGGAACATCTTTTGTTCTAATACTTGGTCTTTGAATCTGGTTCCTGACAGTGAGCTCCTAAATCCCCTAGAACTTCCTGGGTGATAGTAAAGTCTTTGTTCTAA EMBV3_24055 CTGGGGACGTGTGATAAGGTCATTTCATTCAGGTCCCTGACAGGTCTAGCTATAGATTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36565 GAATGAAGTGCTTTGGGTGCCATTCTGAGTCACAGCGTATCTGTCTGCACCCTTGAATGG Gene GeneID:768208|AOAH:NM_001078096:10_cdna Constitutive 2 NULL GeneID:768208 4 GENE AOAH MGC142308 acyloxyacyl hydrolase (neutrophil) EMBV3_41110 GGACCCCAAATCTGCACATCGAAAGCTAAAGGTGTCCCATGATAACTTGACAGTAGAACG Gene GeneID:534604|MID1:XM_002700433:14_cdna UTR3_Alt 2 NULL GeneID:534604 X GENE MID1 NULL midline 1 (Opitz/BBB syndrome) EMBV3_31798 TACAGGAAACAGGCTTCGTTTGTGGGAGAGAACTCTGTGAGGACTCTGCAGTCTGGAATC Gene BVV0102_458221 + 0 NULL GK000018.2:14686977-14718471 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082392 1 XLOC_050997 Coding TCONS_00082392 XLOC_050997 Coding Coding SPIRE2 18:14694398-14700128 j TSS62156 1411 2 TCONS_00082392_2 96 0.072289156626506 2 0.754058299877815 0.00394290381454183 0.00162536252855408 0.00157749263256517 0.00042109901434479 0.0029042816181364 0.000621362634396989 0.000342347797843485 0.000230684208241122 0.000289665667715613 2.0412081612157e-05 4.24851146073216e-06 0 3.69705828092812e-05 0.000482228390360588 7.96456332412879e-06 0.000509491620502032 0.00245916193253725 3.69498847450494e-05 0.000702696828333512 0.00132183278279204 0.000543973568080656 5.25914583195413e-05 0 0 0.000988930003212836 0.000523185178638372 0.000609976303849865 0 0 0 NM_001205387.1 SPIRE2 Bos taurus spire homolog 2 (Drosophila) (SPIRE2), mRNA. 5e-165 585 100.00 0.228915662650602 NM_172287.2 Spire2 Mus musculus spire homolog 2 (Drosophila) (Spire2), mRNA. 7e-100 369 86.50 0.219702338766832 TCONS_00082392_2 sp|Q8K1S6|SPIR2_MOUSE SPIR2_MOUSE Protein spire homolog 2; 2e-32 121 89.23 0.666666666666667 0 coding CGCGGCTGTTATGGAAACCGGCCGGGCGCGCAGGCGGCGATGATGGGGCGGCCATGGCCCGGGCCGGCAGCTCCAGCGGCGACGCGGCCGCGGGCGAGCGGGCCGGGGGCGCGGGGCGCTCCGAGCCGTGGGAGCTGTCCCTGGAGGAGGTGCTGAAGGCGTACGAGCAGCCCATCAACGAGGAGCAGGCGTGGGCCGTGTGCTTCCAGTGCTGCCGCGGGCTGCGGGGCGCGCCGGGCGGCCGGCGGCGCATCCGGGACACCGCGGACATCCTCCTGCGCAGAGACGGCTCGGTCAGCGCGCGGCGGGAGTCCGGTGCGGCGGGTCACCTGAGTAACAACTGAACCTCCGTCTGGAACCTGAGACAGGTTTCTGTCTTGGATCTCCCTGGGGCTTGACTCGCTTCCTGGGCCTTGCTGCTGGGTAGGAAGCCACACCCATGGTGATGTGTGAGTTTATGGCAGAAATGAACTGGAGGAGGAAGGACACACCGCAAACACAAGGCGCCTTTGACCCCTGCGCTGAACAGACAGCTTCCGGGTTTGGAGCACGTGTCTCCTCTTGGCTTCAGGTGGCATCTTGCTTTCACCAGCTCCTCTCTCGAGTGAAGAAGTGAGGAGTAGAGAGCGGAGTCCAAGGCTCCTTCCTGTGCTGACCCCAAGCCCAGAGGACGTCATCAGCGGACGATCACCACCCCCCTTCCCCAGCATCCTTGCAGGGCACTGCGTCCACGTCCCCCTGTTCCCTGCGGTCAGGGAGGCAGGACACCAGGGTCCTTACTCACAACAGTGCTCCTCAGCCCCAGCCCTGCAGAAGGGGGAGAGGCTGCCCGGCAGGCACCCCATCCCACCACCCCCTACTGGGCACAGGGAGGCACCGCCCCCGGGATTCCAGACTGCAGAGTCCTCACAGAGTTCTCTCCCACAAACGAAACCTGTTTCCTGTACTATAACAGGGTCATCTCAAAGAAAACGCCCTCACTTCTTGAATTCTTGTCTTTTGTTGTTTCCCAGAAGAAACCAAAACAATTTTCCACCCCAGCACATATCGGAGAGGGTGTCCTTTGGGGTATGGGTGGTGAGGATGCCAGGGAAACCAGGTGGCTGCGTCTAGCTCCCACCTCACCGTGCATCAGTAGAGGCTTGCGTTTATCTCCGTCTCTCTGCTTTTCCCCAGGGAGCAGTTGGTTTGTAAATAAGTATGAGCTAGTGTGCAGGATGCCAGGTGAGCAGCTTGTTATGTCACGCTTCTGTCAAAGTTATGTCGACTCCAGGTGTTCCAGGGGCTCTGGAGGGTGCACCCAGAGTCTGACTGTGCCTGGTGGGGCTCCCAGCACCACCATTCCTTAGCTGTGTGATCTTGGTAAACCCTCTCTGTCTCTAAGCTCCAGCTTCCTTATCTGTGCAGAGGG EMBV3_04967 ACTAGTAACTGTGTCCTGGATTCTCTCCTGTGCCAATGCCCTGTATCACACCCTCCTCCT Gene GeneID:508604|LOC508604:XM_002691558:8_cdna Constitutive 0 NULL GeneID:508604 11 GENE LOC508604 NULL similar to Olfactory receptor 1J4 (Olfactory receptor OR9-21) (HTPCRX01) EMBV3_03823 CGCCCTATAATTCACAACCCCAAAAGTCATAAACTAGAAGGGCCTGGGGATTCCATGACG Gene GeneID:540661|BRWD1:NM_001103174:36_cdna Constitutive 0 NULL GeneID:540661 1 GENE BRWD1 MGC159654 bromodomain and WD repeat domain containing 1 EMBV3_27562 GCTCACCTAGTACCCAAGCCCACCCCTTATACTTTTCTGGTGAGGTACCGTTTGATAGTG Gene BVV0102_266621 + 0 NULL GK000005.2:29979488-29981932 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194493 TCONS_00194491 TCONS_00194490 1 XLOC_117763 Coding TCONS_00194491 XLOC_117763 Coding Coding SMARCD1 5:29967218-30010330 j TSS145122 9607 2 TCONS_00194491_8 526 0.0491308420943062 25 0.777736540558094 0.00322382242292834 0.00150644443681421 0.00171250003864241 0.000985590510726663 0.00117728573207864 0.000362454816578494 0.000511514816691502 0.00124158658226744 0.000838406577259584 0.000265551943624246 0.000100317027830894 0.000131654158694253 0.000722551184916338 0.000438595775066343 0.000937460708317239 0.00196951776656863 0.000902163244148905 0.000609504668719668 0.00137908703403881 0.00195536418333452 0.00065433563237355 0.0013528555966527 0.000387324542560779 0.000534376000106642 0.00141738830827242 0.00176512123498151 0.00125204068966005 0.000199243887526074 0.000283265145982356 0.000307277501331152 XM_005206312.1 ACCN2 PREDICTED: Bos taurus amiloride-sensitive cation channel 2, neuronal (ACCN2), transcript variant X2, mRNA. 0.0 6477 99.92 0.374310398667638 NM_003076.4 SMARCD1 Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 (SMARCD1), transcript 0.0 4594 90.34 0.350785885291975 TCONS_00194491_8 sp|P78348|ASIC1_HUMAN ASIC1_HUMAN Acid-sensing ion channel 1; 0.0 1094 99.43 0.998098859315589 1 coding 1 1 1 1 0.0739188916123435 0.624806574563829 0.0118044320090345 0.850042618979085 ACTGTCTCCGAGAGCTGGAGGGCGCTTCTGCACCTAGAGCAGATGGGGCCATCTGCAAGGGAAGTGTCCGTGGGGAATTTGCCCCATCAACCTCTCAGGGATGAAAATAATACTTACTACTGTTGATGGAACACCTACTGTTTACCAGGAAGACATTTTTTTTCATCCCTGTGGGCATTAGCCAGATTTTATGGTTTGTGGAGAAAAGGAGTCTCAGATGAGTTAAGGAACTTGTCTAGGATCACACAGCACTGGTGTGACCGAGGTGGGATTTGAATTCAGACTGGAGTCAGTTGTCAGCGTGTTCATCTCTCCTTTGACACTGAGAGAATTTGGCCCATGACTCCAGGGCCAGTCCGGGGGCTGAACACAAGAAAAGCCACAGTGGAAGTTTGCTAAAATGTACAAGGATCCATCTCACCTCAAATGAGGAGGAAACAATAGCCGGGGTCTGATATACAGGAGTAAATAACCAAAGCTTTGATCCAGACCTGTGGATTCTGAAGATCTAGATTTCTCAAGACTGACTGGTATATATCACAGATCTCGAGAAGCTGGGAAATCTGGACCCCACCTCTGGAGATTCTGATTTAATTGGTCTAAAGTGGGGCCACAGCAGCAGCATTTGAAAAAGCTACCCAGGTGACTCAGATGTGTAGCCTGGGCTGAGAACCGCTGTCAGATTCTACCCTGATGTGGCTGCACTGGTGGTTTTATTACTCAATTCAAACAGTAATGCTAATAATAAGTTACTACTTATTGAGGATTTACTGAGTACAAGCTAATGTGCTGAGCTCTTTCTATGCATTAGTTCATGTAATTCTCAGAATCTCCTGTGAAATAAATATTATCCCCATCTTACAGATGAGGAAACTGAGCTCAGAGAGGTCAAGGACCTACTCATGCTAATGAATGGCAGAGCCAGGTCTGGGATGTGAGATTGCCCGATTCACACTCTTACTTTCCCCCAAACTCCTCCTGAGGCTGCTCCTTGGCCTCAATCAGTCCTTGCCTGCCTCCACCTCACCTCATCACCTTCCTTCCACCCCCGCTGCTCCCTCAGTAACATCCCAGGTGACTGAAGCAATTTGCAGCCATTTGAAGAAGCTTCCATGTGTCACTCAGCCTGCGAGGGTGGGGAGCTAGGGAAATTACAGATGCTTCAAAATGGCCCACCCCTCCTCCTGAAGTCATCTGGAATTCAGGAATCAGACTCTGCCCAAGATTTCCTCAGATTTCTGCTTGGGGCCCTCCCAGGCTGAAATCCCACTCCCAAATGCCCCTCTTCGTTGATTCTAAGTATCTGGGAGGGTGCTGCCACCCAGTGGCTGCCCGGGCACATGGCAGCTCTCTGGAACAGCCTGGTGCTGCTGGACAGCTCCCCAGTTCAAGAGGAGAATCTAAGATCCTCCCTTCCTCTTGGTAGCACCTTGACCAAGAATCTAGTAACTGGATCCCAGTCTCCCTTCTCCTCAGCCCTAAGCCTACACTCCCTCTTGGGATCTCCAGCGCCCTTCCCTGTAGTTCCATGTGCCCCCTGCCCCCAACCCCTCACAACTTCTCATCCAACTTCTTTTCTCCGTGCCAGCCCCTTCTCATTATACGTTCTCATTCTGACTTAAAGCCCTGGGAACACACCTCTCACCTCCCTCTCCCAGAGCTCCACCAGCCCACAAGTGGAATGAAGGAGGGGCTAGAGATAGAATTCTTGTCCCCCACACTCCCCTCCTCATCATCTGACACCATCAGACCTCAACAGCCTTCGTGCTAAGAGCCCCTAATGAGCATCAGCAAATTAACAACTTCCTTTTGATTGCTCCTACTCTGTTAATTGGATAGGGAGGGCCCCCCAAGGCCTCTTAGAGAGGAGAAAGGAGGAAGAGGAGAGAGATCCCCTCGGCCAGGATGGAACTGAAGGCTGAGGAGGAGGAGGTGGGTGGCCTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAGCTCCACCCTGCATGGCCTGGCCCACATCTTCTCCTACGAGCGGCTGTCTCTGAAGCGGGCGCTCTGGGCCCTCTGCTTCCTGGGCTCCCTGGCTGTGCTGCTGTGTGTGTGCACCGAGCGTGTGCAGTACTACTTCCACTACCACCACGTCACCAAGCTCGATGAGGTGGCTGCCTCCCAGCTCACCTTCCCTGCCGTCACGCTGTGCAACCTCAACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGACCTGTACCATGCCGGGGAGCTGCTGGCCCTGCTCAACAACAGGTATGAGATACCAGACACGCAGATGGCAGATGAAAAGCAGCTGGAGATACTGCAGGACAAGGCCAACTTTCGCAGCTTCAAGCCCAAGCCCTTCAACATGCGCGAGTTTTATGACCGCGCAGGGCACGACATCCGAGACATGCTGCTTTCCTGCCACTTCCGGGGGGAGGTCTGCAGCGCCGAGGACTTCAAGGTGGTCTTCACGCGGTATGGAAAGTGCTACACGTTCAACTCTGGCCGAGATGGGCGCCCACGGCTGAAGACCATGAAGGGTGGGACGGGCAACGGGCTGGAGATCATGCTGGACATTCAGCAGGACGAGTACCTGCCCGTGTGGGGGGAAACCGATGAGACGTCCTTCGAAGCAGGCATCAAAGTGCAGATCCACAGTCAGGATGAACCTCCCTTCATCGACCAGCTGGGCTTTGGCGTAGCCCCAGGGTTCCAGACCTTTGTGGCCTGCCAAGAGCAGCGGCTCATCTACCTGCCCCCGCCCTGGGGCACCTGCAAAGCTGTTACCATGGACTTGGATTTCTTCGACTCCTACAGCATTACCGCCTGCCGCATCGACTGTGAGACGCGCTACCTGGTGGAGAACTGTAACTGCCGCATGGTGCACATGCCAGGGGACGCCCCATACTGCACTCCAGAGCAGTACAAGGAGTGTGCAGATCCTGCTCTGGACTTCCTGGTGGAGAAGGACCAGGAATACTGTGTGTGTGAAATGCCCTGCAACCTGACCCGCTATGGCAAGGAGCTGTCCATGGTCAAGATCCCCAGCAAAGCGTCAGCCAAATACTTGGCCAAGAAGTTCAACAAGTCTGAGCAGTACATAGGGGAAAACATCCTGGTGCTGGACATTTTCTTTGAAGTCCTCAACTATGAGACCATTGAGCAGAAGAAGGCCTATGAGATTGCAGGGCTCCTGGGTGACATTGGAGGCCAAATGGGGCTGTTCATCGGGGCCAGCATCCTCACGGTGCTGGAACTCTTTGACTACGCCTACGAGGTCATAAAACACAAGCTGTGCAGAAGAGGGAAGTGCCAGAAGGAGGCCAAACGGAGCAGCGCGGACAAGGGCGTGGCCCTCAGCCTGGATGACGTCAAAAGACACAACCCGTGCGAGAGCCTCCGGGGCCATCCTGCCGGGATGACGTATGCGGCCAACATCCTACCTCACCATCCGGCCCGAGGCACTTTTGAGGACTTTACCTGCTGAGCCCCGAAGGCCACTGTACCAAAGGCCTAGATGGGGAGGGCTAGGAGAGCAAGGGGGCCCCCAGCTGCCCCCCACATCTGCCCTGGGGACTCACTCCCCTCTCCCAAGGCAGCCCCCCACTCCTGGGCGGTCCTTTCCTCTTGAATGTGGTGAGGAAGGAGTCTGGAACCACAGAGTCCTCTCCCCGCCTCAATCCCTTTCTTTTCTTTTTTTTTTTTAACAAAACTAATCTAAAACAGAAACTTAAAAAGAGAGTATGGGGCAAGTGACCTCAGGCTGCCCCTCTCTGCTCCATGCTGCCTCCCACAGCTCCCAGCCTGAATTCTGTCTGTCCGGCTGTCTGTCATCTGAGTGTCCACCTACATTTTGCTGCCACCAGTCACCAAAGCCCCCTTCCAATGGGGGGTGGAGGGGATCCCTTGGGGTCTGGAGTTTGGCCCTAAACCAGAGAATGTACCTTGAAGGGGAGGGCTAGTAGGGGGGGCTTCCCCAGCCTTAAGAGACCCTCTGAGCCCAGTGGCCCCCCCCCAACCCCAAGTCTCCAGGCAGGAACCCTAGTCCTGTCTGTTCTCCCCCCACCACCTGGTAACCTGTGAAGTCTCTAGGGAGGTGGGGGTGGGGGATCCCCTGAAGAAGTGGAGCTGGGACACGATGTGGCCCTGGTGCTGTAGGCCACATTCTGATAACTGCAAGTTCACCCCCCACCCCAGAGCTGCTGGAGAGAAATCGCAAGAGGCAGCCCTCCTCTGCCGTCCCATAAGAGATCCAGCTGGTTGGCCTCCAGCTCAGGGAGCCGGGCACTGGTGCCTAACCTCACTGGTCCCTCTCCCCCAGGCCCCTGCAGAGGGCCACATCCATAAATTTTCTTATGGAATTCTCCTAAGTCCTCTTCTGAAACATTTGCTTCTCTCAACAACTTCATCTGCATTTTCTATTTCTATACGATACAGACTCTATATTGCTATATCTCTGTATATACTTTCCCCGACTCTGTCTCTATTTCATCCCCTTGTGTCTCTAAGAACAACCCTCTCCACCCCTCCTACAAGTTCCCCTTCTGTGTTTCCACCCCTTCCCTGGTCTCTGAATGCCTTCTCCTGTATAAAGAGTTGGACTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTAAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACATAAAGGAAGCTGTGAATTACAAGCTCTGCCTCTTTCTGGCCTCACCCTGTCCCCCCAGCCTGGGTTTCCTTTGCCTTCCCTGCAGCCTTAACATTCCCTCCCCTGCTCCACCCACCCCACTGTCCTTTGCCTGGCTGACTGCAGCCTCCCCAGGGAAGGGGTTGCTACAGCGAGAGCCCCCACCCATGGGATGGAGATCTGCTCTGCACACTAAGGCAAGAGGGAGCTGTGAGCTGATGACTGCAGCAGAAGCAGCAGGGTGTGGACCGGCAGAGGCCTTCAGTCAGCGGCCTTTGTCTCCTTCTGGATGCCCAGGCCTCTTTGCTCACCTAGTACCCAAGCCCACCCCTTATACTTTTCTGGTGAGGTACCGTTTGATAGTGGAATGAAAGAGACAGGCCTAGAGGGGACATTGAAAGCTCTGCTATTCTGTTCCTCCTTTCCTCCCTTAATGAGAAACCAGCGAGATAGAGGACCTGCCATGCCCCCTCCATCAGGGCCCTCCTCCCAGGCCAGAGCCCTGCCCCTTCCCAGGCCTTCTCTGTCCAGCTGCCTCATAGCCTCCAACCCCAGAACAAGACCTGTGGCAGGTCATCTGTGCATTCGCCTGGAGCTGGAGAGTGAGGCCATAGGATCTTTGGCAACTCTTGGTTCCCAGGAGTTCCTTAGAGATCAAACCTCTCCAGAGGGAAGCAGGAGCAAGGCCAAAGGGTGTGCAGTGGATGGGGAACAGCAGGCAGGGCTATAGGTGACGCATGCCTCTGGTCTAATAAACTGGGTTTTAACCATCTCTTCTTCAATGTCGTTCTTCTCTTATTTGAATAGTATTTAGGCCTTCCCACTAAGTGTCTAGAGCTGATTTTGGCTTGGGGCCACACAATCAGGGGAGGAGTAAGGAGGCGGGAGCAGGGGTGCTCTGGTCCTCCTGGGATGGGACAGGCTGACCATCACACTAGGAATGGTTTGAACCACTGGGCAGGGAAAGAGGAAGAGGTCAAAGGCAACAAAGATCCCCAAAAGAAGTTCTAGCAGAAAGGATTCTTTGGTGAGGAGGAAGGGTCACACTTCGAAATAAGCTTAAAATCTGGTAGCAGTTTAGGTTAAAGGTCAGGGGCAAAGCTGGGTTGAAGTTCCTGTAGTTATTGAGGAACTTTATGGAATGAGCCCCGGACTATGAACCGGAAGATCTGGATCCTAGGTTTCGACTTTACTGCTAACTTGGTTGACTTCACCAAGTTATTTATTGAGTTCACCTCGCCTGTTTGTAAAATGGAATAAACAGTGCGTTCTCTTCAGTGTGCTGGGCTTAGAACCGGAAGAGAAAGGAAAAACGCACTGCGTTTGGAAAGTTAAACGCACTGCGCCAAGATAAAGCATTTACTCCATCACCCTCGCGTAGGGATGGTGCAGTGGTCCCCCTTTCCAGGTCCTTGTCTCCCTCCGTCGGCCTGGGGGCGCCCTTTCGCACGGCTTCTCTATCCCAGAGCTCTTCTCGATGGTTTTCCCTCCCGGATCGTGAAGGCTGGAGGGAGTGGTCACACGCCTTTTCCCCTAGTCGCCCCCCTCTAGCCCACAGTCTCGCTGCCCTGAGCCTCCCGGGCCGGCGGGCCGGCCGGGCGGACAGGAGGGCGCGCGAGGGGCGCGCGGGGGGGGCGGGGGGAGTTCCGGTTCCGGTTCTTTGTGCAGCTGCAGCAGCGGCTCCGGGAAAGATGGCGGCCCGGGCGGGTTTCCAGTCTGTGGCTCCGAGCGGCGGCGCCGGAGCCTCAGGAGGGGCGGGTGCGGCGGCTGCCCTGGGCCCGGGCGGGACACCGGGGCCTCCGGTGCGAATGGGGCCGGCGCCGGGTCAAGGGCTATACCGCTCCCCGATGCCTGGAGCGGCCTATCCGAGACCAGGTATGCTACCAGGCAGCCGAATGACACCTCAGGGACCTTCCATGGGACCCCCTGGCTATGGGGGGAACCCTTCAGTCCGACCTGGCCTGGCCCAGTCAGGGATGGACCAGTCCCGCAAGAGACCTGCGCCTCAGCAGATCCAGCAGGTCCAGCAGCAGGCGGTCCAAAATCGGAACCACAATGCAAAAAAAAAGAAGATGGCTGACAAAATTCTACCTCAAAGGATTCGTGAACTGGTACCAGAATCCCAGGCCTATATGGATCTCTTGGCTTTTGAAAGGAAACTGGACCAGACTATCATGAGGAAACGGCTAGATATCCAGGAGGCCTTGAAACGTCCCATCAAGCAAAAACGGAAGCTGCGAATTTTCATTTCTAACACTTTCAATCCGGCTAAGTCAGATGCCGAGGATGGGGAAGGGACGGTGGCTTCCTGGGAACTTCGGGTAGAAGGACGGCTCCTAGAGGATTCTGCCTTGTCCAAATATGATGCCACCAAACAAAAGAGGAAGTTTTCTTCTTTTTTTAAATCCTTGGTGATCGAACTGGACAAAGACCTGTATGGACCAGACAACCATCTGGTAGAATGGCACAGGACCGCCACTACCCAGGAGACGGACGGCTTCCAGGTGAAACGGCCAGGAGACGTGAATGTGCGGTGCACTGTCCTGCTGATGCTGGACTACCAGCCTCCTCAGTTTAAATTAGACCCTCGTCTGGCTCGGCTCCTGGGCATCCACACCCAGACCCGTCCGGTGATCATTCAAGCACTGTGGCAATATATTAAGACACACAAGCTCCAGGACCCACATGAGCGGGAGTTTGTCATTTGTGACAAGTACCTCCAGCAGATCTTTGAGTCTCAGCGTATGAAGTTCTCAGAGATTCCCCAACGGCTCCATGCCTTGCTTATGCCACCTGAGCCCATTATCATAAATCATGTCATCAGTGTTGACCCGAATGATCAGAAAAAGACAGCTTGTTATGACATTGATGTGGAAGTGGATGATACCTTGAAGACCCAGATGAATTCTTTTCTGCTGTCTACTGCCAGCCAGCAGGAGATTGCTACTCTAGACAACAAGATCCATGAGACAATAGAGACTATCAATCAGCTGAAGACCCAGCGGGAGTTCATGCTGAGCTTTGCCAGAGACCCTCAGGGTTTCATCAATGACTGGCTTCAGTCGCAGTGTCGGGACCTCAAGGTCATGACTGATGTGGTGGGTAACTCAGAGGAGGAGCGCCGAGCAGAGTTCTACTTCCAGCCTTGGGCCCAGGAGGCCGTGTGTCGATATTTCTACTCCAAGGTGCAGCAGAGACGACAAGAATTAGAGCAAGCCCTGGGGATCCGAAATACATAGGGCTTCTCCCACAGCCCTGATTTGGCTGCAACGATTTCTTTATTGGGCCCTGTGCTGCCTGCCTCGTGGCACCTGCCTTGGTCTTGCTTGGGGCTTTCCAGGGGATGCTGTCGGTTCTAAGACAACACCAGAATGAAGAGGGTCTCACGTGACACCGGCTCTCCTCTTCTCCCACCCCATCCCTTCCTATCCCCAGCTTCCCTTTGCCCCACAAAGTTCCCATGTGCCTCTCCCCTCCCCTGGTCTGCATAAGACCTCTAGATAGTATTAGAGAGAGAACCTGTAGTGGTAATCAGTGCATTGAATGGATTGGGCCTAAGGCCAAGTGGTCTTCAAGGGGACCAGCTACACTGATCCTGCCCTTCAGAGACCCAGGAGTTGGGAGCTGTAGCCCCTTCTCCACCACTCAGGCCTGGGGGCACTCTATGAGCTAGTTGATCTTGGCTCTCCTGATAACAGAATCCAGTTTCCTTCCTTCCCTCCACAGGTTTGGAGCAAACTCTCCCTTCACTTGTTGCTCTCTAGCACTAAAGGAACCCTGGCTCTCGGGCTCCACTGAGCCCCAGGTCAGTCCGCAGCCCTCCAGAGGGGCCTGCTGTCTCAGTGCTTCTCTCCTCCCTTACAGGGGGTCCACATCAGTATTAGAGTTTGTTCTAGTAGTATTGCTCCCTCCCAGCACACTCCCTGTAGCTGCTGTTGAGGATTCCCTCCTGTCTGTCCCAACTGAGGGCATTCGGGTGGGGGAATCTTGCCTTTCCGTGTCAGAGCCCCGGGGACCTCACCTAGGGTGCTGTCATTGCCAGCGGAGGCTGTTCCTTTCTGCTGTAGTGTGGAGGTGTGATTCATTCATTCACTCCGCCCTGCCTCCCCCATCCCTTCTTGGAGAAACAGGCCTGCAATCAAACGGGTAAAAGCCCTGGGCCACCCCTGTCTTCCTGTCCCTTGTCTGCCCAGTTGACACCCGCTGGTGACTGCTAGGGCACTGAGGAGTGAAAGCGCCTAGGGCTGGAGAGAGCTCTGACTCGGGTCTGTGACTCTTCCCCTCTCCCTGCCTCACAGGATTGTGACTCCCCAGCCCCTGCCCTCAAAGCTTCAGACCCCTCAGGTAGCAGCAGGACCTTGTTGTGTGATCTTGGCCCCTTGGAACTGAGATGGTTTTGCATCTTTCCAGGAGAGCCTCAAATTCTTCCAGGTTGTATCACCCCCCGAGTTAGCATATCCCAGGCTCGCAGACTCAACACAGCAGGGTGGGAGACAGCTGGGCACAGAGGGGGAATTCCGTTCGGCATGGGCTGTAAACCTGCAGAACTGACAAAGCCCCTGCTTCCCCACCCCCTCCTCAGGCTCCTGCGAGCACATCCCCCAGCCCTGTGTCCCTGCCTGTTCCACGCTGGGTACAGCAGGACTCGCTCCTCATCTTCTTCCACTTATTAATCCCCGCCTCCCTGAAAGGTTCTCCCCACAGTGACACTGGACAACCTCTGTCCCTGAGGCTGGAACCATGAGAAGGAAGCTCAGCACTCCTACAGTGTCCCTGTTGAAGATAACTGTTTTTATTAACTGAATTATTATGTTTTTTTCATGGACCAAAATTTTTTTTGTACTGCCCCCTTATCGATGTCACCCAGTTTTAATAAAAGAATCTTCTGAAGA EMBV3_05996 TGAGGGTGTAAAGGAGGGACAGAAAAGCAACCACTTCTTAAGTGGGATATTCTCATAAGC Gene GeneID:506724|PDCD4:NM_001083647:24_cdna Constitutive 0 NULL GeneID:506724 26 GENE PDCD4 MGC139194 programmed cell death 4 (neoplastic transformation inhibitor) EMBV3_27595 CATTACAGGAGTTGATGGCTCCTACAAGCTTTTCCTCCGGCACTTGGTCATCCACACTAG Gene GeneID:100295702|LOC100295702:XM_002697928:583_cdna Constitutive 0 NULL GeneID:100295702 25 GENE LOC100295702 NULL hypothetical protein LOC100295702 EMBV3_41518 CTATCACAAACTCCACTGGGAAACAGAATTCAGACCGGTGGCACAGCAGCTTCTAAACCG Gene GeneID:520151|ARMC2:NM_001075801:35_cdna Constitutive 1 NULL GeneID:520151 9 GENE ARMC2 NULL armadillo repeat containing 2 EMBV3_29716 CTTCGATTCTTCGATCATTCTGAAGCCATAGCTGCCGGGATCTTCTACGACCTGGGGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40588 CAGAGACCCAAAGATCAAGACATTCCAAATGGGGGACTTCCCTAGTGGCCCAGTGGCTAA Gene GeneID:519937|JUB:XM_002690509:493_cdna Constitutive 0 NULL GeneID:519937 10 GENE JUB NULL jub, ajuba homolog (Xenopus laevis) EMBV3_03226 GGCAACAGAGAAGTTTGATGATTGTAAAGCAAAACGTGACACCCCCACCTCATGCACTGT Gene GeneID:522155|IL6ST:XM_002696322:59_cdna Constitutive 0 NULL GeneID:522155 20 GENE IL6ST NULL interleukin 6 signal transducer (gp130, oncostatin M receptor) EMBV3_34892 GTACAAAGTTGTGTGACAGGGCATAGTCTTTTGGGGTTTGGAATCCTGCCTTTGATGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24799 CCTCTGCGACATATGCATCAAGAAGAAGCTGGACAGAACTACTGAGACTCCTCCATCACC Gene GeneID:615280|GPR62:NM_001101238:295_cdna Constitutive 0 NULL GeneID:615280 22 GENE GPR62 NULL G protein-coupled receptor 62 EMBV3_18083 TAGCCAAGAAGTTGGGAGCTTTTAGAGAAGGCTGTGTGGGGAAAAATTCCTGCCTGGCTG Gene GeneID:540541|LHFPL3:NM_001076226:199_cdna Constitutive 0 NULL GeneID:540541 22 GENE LHFPL3 LHFPL3 MGC137667 lipoma HMGIC fusion partner-like 3 EMBV3_13936 CCAAGCTGGAACCCAAGCCCATCGTGCCCAAAGCCGAACCCAAGGTCAAGGCCCGCAAGA Gene GeneID:614651|JPH2:XM_002692325:98_cdna Constitutive 0 NULL GeneID:614651 13 GENE JPH2 NULL junctophilin 2 EMBV3_02465 TTCCAGAGTGCAGCTATTGGTGCTTTGCAGGAGGCAAGTGAGGCTTATCTGGTTGGCCTT Gene GeneID:781566|LOC781566:XM_002691134:137_cdna Constitutive 0 NULL GeneID:781566 11 GENE LOC781566 NULL similar to Histone H3.3B CG8989-PA EMBV3_18825 TCCCTGTGGTCCCTAAAAAGATTTCCTTGAAGCACCAATTACTTTCCTCTGCCCTGCCCT Gene GeneID:784029|TDGF1:NM_001080358:167_cdna Constitutive 0 NULL GeneID:784029 22 GENE TDGF1 NULL teratocarcinoma-derived growth factor 1 EMBV3_30491 CTCAGTCCAAAATCAAGAGGGTTGGGGGAGAGAGGAAAGAGGCTGCAAAGAGCCAGGTTA Gene BVT0102_142896 + 0 NULL GK000023.2:27007369-27008843 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132816 TCONS_00132818 TCONS_00132815 TCONS_00132817 1 XLOC_080887 Coding TCONS_00132818 XLOC_080887 Coding Coding - 23:27003232-27008341 - TSS99291 2943 1 TCONS_00132818_2 399 9 0.425606891151135 0.00201252177694419 0.00134223583840498 0.00136200388754907 0.00225353573376528 0.00379139876572106 0.000744468158692526 0.00132533385800266 0.000403823586157398 0.00396806726819481 0.000658335783211697 0.000642905087362444 0.00049827014902557 0.000584600135671492 0.00285622491451472 0.00228234484982925 0.00281814029008537 1.27489708698384e-07 0.00521175152898248 0.00322332413485813 9.94669219719081e-08 0.00162967418026299 0.00333105249382112 0.00268549324890269 0.00250541894790158 0.00276181583082105 0.00356940417202403 0.00214612174586303 0.000836676846047036 0.000649871664825539 0.00220075321665952 NM_001256883.1 PBX2 Bos taurus pre-B-cell leukemia homeobox 2 (PBX2), mRNA. 0.0 5227 99.93 0.986748216106014 NM_002586.4 PBX2 Homo sapiens pre-B-cell leukemia homeobox 2 (PBX2), mRNA. 0.0 3324 84.62 0.998980632008155 TCONS_00132818_2 sp|P40425|PBX2_HUMAN PBX2_HUMAN Pre-B-cell leukemia transcription factor 2; 0.0 570 94.89 0.781954887218045 3 coding 0 1 1 1 -0.0562198630361112 0.788539868876154 -0.0163911893699304 0.837555222320533 CGGAGCAGGGAGGGGGCCTCAGGGCCCCCCCCAACTATGGACGAGCGGCTGCTGGGGCCGCCCCCTCCAGGCGGGGGCCGGGGGGCCCTTGGATTGGTGGGTGGGGAGCCTGGGGGCCCTGGCGAACCTCCCGGTGGCGGAGACCCCGGTGGGGGTAGCGGGGGGGTCCCGGGAGGCCGAGGGAAGCAAGACATCGGGGACATTCTGCAGCAGATAATGACCATCACCGACCAGAGCCTGGATGAGGCCCAGGCCAAGAAACACGCCCTAAACTGCCACCGCATGAAGCCTGCTCTCTTTAGCGTCCTGTGTGAAATCAAGGAGAAAACTGGCCTCAGCATTCGAAGCTCCCAAGAGGAGGAGCCTGTGGATCCACAGCTGATGCGCTTGGACAACATGCTTCTGGCAGAGGGTGTGGCTGGGCCTGAGAAAGGGGGTGGCTCAGCGGCTGCAGCGGCAGCAGCTGCAGCCTCCGGGGGCGGAGTGTCCCCTGACAACTCCATCGAACACTCGGACTATCGCAGCAAACTTGCCCAGATCCGCCACATTTACCACTCGGAGCTGGAGAAATATGAGCAGGCGTGTAACGAGTTCACAACCCACGTCATGAACCTGCTGAGGGAGCAGAGCCGCACGCGGCCCGTGGCACCCAAGGAGATGGAGCGCATGGTGAGCATCATCCACCGGAAGTTCAGCGCCATCCAGATGCAACTCAAGCAGAGCACCTGCGAGGCCGTCATGATCCTACGTTCCCGCTTCCTGGACGCCAGACGGAAACGCCGTAACTTCAGCAAACAGGCCACGGAGGTTCTGAATGAGTATTTCTACTCCCACCTGAGTAACCCATACCCTAGTGAGGAGGCTAAGGAGGAGCTTGCCAAGAAGTGCGGAATCACTGTCTCTCAGGTCTCCAACTGGTTTGGCAACAAGCGGATTCGCTATAAGAAAAACATAGGAAAGTTCCAGGAGGAGGCAAACATTTATGCCGTCAAGACCGCCGTGTCGGTCACCCAGGGAGGTCACAGCCGCACCAGCTCCCCGACACCCCCTTCCTCCGCAGAGGCTCTGGTGGCTCTTTCAATCTCTCAGGATCCGGTGACATGTTTCTGGGGATGCCCGGGCTCAACGGAGATTCCTACTCTGCCTCCCAGGTGGAATCACTCCGACACTCAATGGGGCCAGGGGGCTACGGGGATAACCTCGGGGGAGGCCAGATGTATAGCCCTCGGGAAATGAGGGCAAATGGCGGCTGGCAGGAGGCTGTGACCCCGTCCTCAGTGACATCCCCGACAGAGGGACCAGGGAGCGTTCATTCGGACACTTCCAACTGATCTTGCCCCTCAGGGCCACAGGGGTGGGGGCTCACAAGGCAACTCTTGAAGAGGACACAGGCATCCGGAGAAGACCCAAACACGGGAGAAGCACAAGACAAGAGAAGGCCAGATGGGGCCGTCCCCTCCCCGGCCAGATTCTGTCAGTGCTGGGGGTGCCGACGACATGGCAGGGAAGATGGGGTCCCCTCAGGGGAGAGTGGGGTCTGTCTACCCCTTTTTTCTTTCTTTTTTTTCTCCCCCTTTCTCTCTCTCAGAAACACACACACCCTATTTTTCAGATCTTTCCTCTCCTTTCTCATAAACACACCGACAACTGTTCTGTTTCTCTCTCTCTGTCTCTCTGTGGGCTCCCCCACTCTTACCTCCCCCACCCCACTTATCTGCTCTGGGATCTGTGGAGACGCCAGCCCTGCCCAACCAGAGATGCCAAAAATGGGGACATGACTTCTGGACAGAGGACATGGGCCACGCCCCCTGTCCCCCCCCACCTCCTGCCCCTCCAGACGGCTTTTATTACCTCATACGCAGCTCATCTTAAACCAATAGAATCGCTCGGTGGACGAGAGTGTCTGACTCAGATATCTACCTCGGAGGGAGTTTCTGCTACTTTAGGGAATTGTTGACTGGGCTTTGGGGTTGAATTTTTTTTTTTTAAGGAAAGAAAAATTATCCCGGGGTTCCATCTGTAGTTTTTTTAATTCTTATTTTGGGAGTTTTTGTTGGTGGTGGTGGTGGTTCTTAATTTTTAATTTAGTTTGGGGAAGTAGATGTTTTTATAAATAATGTGTTTTTGTTTTTTTTTTTTAAGTTGCTTTCCCATATTAGGGGTAATAGCCAAAGGGGTCATGATAAGAGAAAGGGGAACAAATAGGCCTGCCTGGCTCCAGTCCTGTCCATCGAGAAGTAACATTTAACAGGGCATCAAGCCTGCTTCCCCCACCCCACACACACACACAATCACTTAGGTGTTCTCCTTTGCTTATAAAGTCACTTAGGTGTCCTTTGTTCATGTGGGCAGCTTTCCGCTGCACTGAGCATGGAGGCAGTCGGTCTTGCTCTGTCGGCCTATCCCCCTTCTTCCTACATCCCTTGGGCAGGGCTGGACTCAGTAATTGTGAGCAAATGACACATCGAAAATCCTTTTTTTTTAAACTATTATTTAAAGATTGGAGGAGGAAGAATGGGGAGGGGGTTATTGCCAAATATGTTAAATATGGGTTGGGGTGTTTGTGTGTGTATTGCCCTCAGTTTCCCCAGATATGAGGTATCTTTTTTTCTCAGTCCAAAATCAAGAGGGTTGGGGGAGAGAGGAAAGAGGCTGCAAAGAGCCAGGTTATGAGGGAAGGTAAAATCTCCATCCCCAACCCTGGGCCCTGAACCCTACCATCTGAACCCCTCAAACATCCTCAGGCATTTATAAGACTGTCACAGTGGGGAACCCCTCCCGTCAAAGATCCAGGCAGGATTGGGGGGCAGGTTGGGAGTGTGATGGGTGGGGGTGGGAGGCATGGGCTGGGGGCAGTTCTCTCCTCACTTGTAAACTTGTAGTTTCACAGAAAAAAAAAACAACCACAGTTTTAAATAAAGAAATTTCTTTTTTTCCTGGGTT TCONS_00132819 s 5' 503 TCONS_00132814 s 3' 792 EMBV3_10815 AGTTCTGAGACTTGCCTGCACTGACACTTCTGTCCTCGAGTTCCTCGTGATCTCCAACAG Gene GeneID:514319|LOC514319:XM_002695574:91_cdna Constitutive 0 NULL GeneID:514319 19 GENE LOC514319 NULL similar to olfactory receptor MOR240-3 EMBV3_06744 CATGTTTCCCAGAGTAAAGAACAAAGTTCCCTGTGGTTTTCAGGCAATGTTCCAGGGCCC Gene GeneID:282258|IFNAR2:NM_174553:19_cdna Constitutive 0 NULL GeneID:282258 1 GENE IFNAR2 IFNBR interferon (alpha, beta and omega) receptor 2 EMBV3_09035 CCCACAGTTCAGTGACAGGGTTCAGGATTTTGTGGGTCTGTTTTCCTTTCTTCCTGCGGT Gene BVT0102_054343 + 0 NULL GK000001.2:83764149-83819540 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004371 TCONS_00001387 TCONS_00001389 TCONS_00001390 TCONS_00001391 TCONS_00001383 2 XLOC_001027 XLOC_000349 Coding TCONS_00001391 XLOC_000349 Coding Coding - 1:83813991-83818552 - TSS709 1635 3 TCONS_00001391_1 78 3 0.642105263157895 8.00015488527395e-107 0 5.62511528843073e-14 0 0 0 5.24236952298585e-256 0.000139099081568465 1.05494135778181e-62 1.06883457574698e-163 6.38530648557762e-05 0.000199008372905198 0 0 0 0.00769190039836239 0.00852736607721673 0.00411590736086324 9.36890880316248e-82 0 2.52831974501438e-17 0.00170304269706666 0.00325780046042271 0.00105323403676124 2.00771321173859e-22 0 0 0.000487855720077086 0.000318155947239872 0.000930278616394958 XM_005201585.1 ABCC5 PREDICTED: Bos taurus ATP-binding cassette, sub-family C (CFTR/MRP), member 5 (ABCC5), transcript variant X1, mRNA. 0.0 2931 100.00 0.993272171253823 NM_005688.2 CFTR/MRP Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 0.0 1927 86.68 0.993272171253823 TCONS_00001391_1 sp|O15440|MRP5_HUMAN MRP5_HUMAN Multidrug resistance-associated protein 5; 2e-46 161 98.72 0.987179487179487 0 coding 1 1 1 1 -0.0289354359458275 0.802764533442882 -0.0162081880759773 0.778663261849134 GTAAGGGCAGATTCTGATTCTAGATGAAGCCACAGCTGCCATGGACACCGAGACAGACTTACTGATCCAAGAGACCATCCGAGAAGCATTCGCTGACTGCACCATGCTGACGATTGCCCATCGCCTACACACAGTCCTAGGCTCTGATAGGATTATGGTGCTGGCCCAGGGGCAGGTGGTGGAGTTCGACACCCCATCGGTCCTTCTTTCCAACGACAGCTCCCGGTTCTATGCCATGTTTGCTGCTGCAGAGAACAAGATCGCCGTCAAGGGCTAACTCCCCCAGTGCCGTCCACATCTCTTTTCTTTGGAGCATTGCCATTCCCTGCCTGGGGCGGGCCCCTCACTGCGTCCTCCTGCCGAAACCTTGCCTTTCCCGATTTTATCTTTCGCACAGCAGTTCAGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCCTATTTTGATTATTGTATTTATTCCATATTCATGTAAACAAAATTTAGTTTTTGTTCTTAATTGCACTCTAAAAGGTTCAGGGAACCGTTATTATATATGTATCAGAGGCCTATAATGAAGCTTTATACGTGTAGCTATATCTATATATAATTCTGTACATAGCCTATATTTCCAGTGAAAATGTAAGCTGTTTATTTTATATTAAAATAAGCACTGTGCTAAGAACAGTGCAGATTCCTTTCTATCATTTTTGTACAGTCTGCTGCACTAGAGGTCTGGTTTTGCTATTAGACTATAGGAAGGGTAGCGTGCGTTTTTCCCCAGCTGGCTGTTTCACGGTGCCGGGATTTCTGGGTGTCCGAAGGAAGGAGTGTAGCAGTAGCCGGCTCTCCAGTGGCCCCCTGCTGCCTCCCAGCAGCCACGCCGGGGTGGGGCAGAGCGGGGCCCACGGAGGCCGCGAAGAGCACCGTGAATTCTCAGGGCTCCTGCTTTCTGTCCTCTTGTCACTTCACCGCTTCTGTCGGGAGAGCAGTGGGTCAGAGTCCCAGACCCCTCTCCTCCCCCTCCACCGGGACCGAGAGTCACAGACCCTTCCTCGGCCAAGGGGGAGCATCCTCCTGCCTTCCTCTGTTCTGCTGTTGCTTCTCAGCAAGCATTGAGTCTGCTCCGAGTGTCCCACTGCCTCAGGTTCCCAATGCTGGCCAACGCACAGAGCTCTCTGGCACCTTGAAACCGTCTGTTCTGAGCCCTGGAGCCCACTGCCGCTTGGCCCGATGGTCCTTCTTCATTTGCCTGGCCTCACACCCCCACAGTTCAGTGACAGGGTTCAGGATTTTGTGGGTCTGTTTTCCTTTCTTCCTGCGGTTGCCGCAGAGTCTCTTCCTCTCTCCAAAGTCCGTGACTTTAAGCAGCTCTTGCTAATCAGTGTCTCACACTGGTGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGATTGCCGTGTGGTTCGGTGTGTTCCTGCCAACCCCGATTGTGCCGTGGGGCCAGTAGCTCAGGTGGGCGTGGTCACTGCTGTCATCCGTTGAATGGTCAGCACTGCATGTCGTGACCAACTAGACATTCTGTCGCCTTAGCATGTTTGCTGAACACCTTGTGGAAGCAAAAATCTGAAAAAGTGAATAAAATTATTTTGGATTTTCTAAAACT TCONS_00001387 TCONS_00001387 TCONS_00001387 s 5' 0 TCONS_00001387 TCONS_00001387 TCONS_00001387 s 5' 0 EMBV3_03653 TGTCAGGACTTACTGTTGACACAGAGGAGCGGCTGAAAGGAGTCATTGACCTGGTCTTTG Gene BVT0102_051976 + 0 NULL GK000002.2:132323963-132470749 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104100 TCONS_00104080 TCONS_00104092 TCONS_00104096 TCONS_00104081 TCONS_00104093 TCONS_00104104 TCONS_00104083 TCONS_00104105 TCONS_00104101 TCONS_00104075 TCONS_00104085 TCONS_00104086 TCONS_00104077 TCONS_00104098 TCONS_00104087 TCONS_00104097 TCONS_00104091 TCONS_00104089 TCONS_00104076 TCONS_00104102 TCONS_00104094 TCONS_00104090 TCONS_00104084 TCONS_00104099 1 XLOC_062288 Coding TCONS_00104090 XLOC_062288 Coding Coding EIF4G3 2:132094134-132452282 = TSS77152 6219 1 TCONS_00104090_6 1592 35 0.982733346921795 0.00461136835997469 0.00307203221132082 0.00226672707664808 0.00289209415766693 0.00175343702249278 0.00121113958928459 0.00125835855461079 0.00270814532753781 0.000244657509355193 3.72040101673174e-08 1.38768192238575e-13 8.93659044997079e-05 0.000260283381763677 0.000496766011391174 2.96236892872258e-06 0.00205814208189146 0.00253131176349622 0.00285319363809093 0.00212478211966113 0.00449855212246868 1.89869048043521e-15 0.000210929049186383 1.17286542249912e-14 0.00230927501691332 0.00555639040520087 0.00301962425348416 0.00281239362779424 0.000522151174110204 0.00072349896197896 7.1338906788406e-08 XM_005197628.1 EIF4G3 PREDICTED: Bos taurus eukaryotic translation initiation factor 4 gamma, 3 (EIF4G3), transcript variant X5, mRNA. 0.0 1.014e+04 99.98 0.904003859141341 NM_001198802.1 EIF4G3 Homo sapiens eukaryotic translation initiation factor 4 gamma, 3 (EIF4G3), transcript variant 2, mRNA. 0.0 9048 92.26 0.999839202444123 TCONS_00104090_6 sp|O43432|IF4G3_HUMAN IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3; 0.0 2858 92.40 0.999371859296482 3 coding 0 1 1 1 0.0105568857567241 0.920083263344761 0.0104179256944805 0.852675007398316 ATCCGCCGGCATCGCCTGAGCCCCGCTACCGAGAAGGGCGCCGCTTCCCCCGGGGAGGGGGATAAAGACCCCCCGCCGCCGGCCCATGAGGATATTGCCGTGAAAGGCTCAGCGGCTGCAGCAGGAACCGGACCCGGCACCGGAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGTACCGCCTCCTCACCCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCAGCAGCAGCGGAGGCCCCTCCTCACCCGAACATCAGGGCCCTCCAGACCCAGGCGCCCCAACAAATTCCTAGAGGACCTGTGCAGCAGCCACTCGAGGACCGAATCTTTACTCCTGCTGTCTCGGCAGTGTACAGCACGGTAACACAAGTAGCAAGACAGCCGGGACCCCCGACCCCTTCCCCTTACTCAGCACATGAGATAAACAAGGGGCATCCAAATCTTGCGGCAACGCCCCCGGGACATGCCTCGTCCCCTGGACTCTCTCAAACCCCTTATCCCTCTGGACAGAATGCAGGTCCAACCACGTTGGTCTATCCTCAAGCTCCTCAGACAATGAATTCACAACCTCAAACCCGTTCTCCGGGAGGATTCAGACCCATCCAGTTTTTCCAGAGGCCTCAAATACAGCCTCCCAGAGCCACCATCCCGAACAGCAGCCCTTCCATTCGACCCGGTGCACAGACACCCACTGCAGTGTATCAGGCCAATCAGCACATCATGATGGTTAACCATCTGCCCATGCCGTACCCAGTGCCCCAGGGTCCTCAGTACTGTATACCACAGTACCGTCACAGTGGCCCTCCGTATGTTGGGCCACCACAACAGTACCCGGTTCAACCACCAGGACCAGGTCCTTTTTATCCTGGGCCAGGACCTGGGGACTTCCCCAGTGCTTACGGAACGCCTTTTTACCCAAGTCAGCCAGTGTACCAGTCAGCACCTATCATAGTGCCTACGCAGCAGCAGCCCCCTCCAGCCAAGAGAGAGAAAAAAACAATAAGAATTCGGGATCCAAACCAGGGAGGTAAAGACATAACAGAGGAGATTATGTCTGGAGGTGGCAGCCGAAATCCTACTCCACCCATAGGGAGACCCACTTCCACACCTACTCCTCCTCAGCTGCCCAGCCAGGTCCCCGAGCACAGCCCTGTGGTCTATGGGACTGTGGAGAGCGCTCATCTTGCTGCCAGCACCCCTGTCACTGCAGCGAGCGACCAGAAGCAAGAAGAGAAGCCAAAACCAGATCCAGTGTTAAAGACTCCTTCCCCAGTCCTTAGGCTAGCCCTCAGTGGAGAGAAGAAAGAACAAGCAGGCCCGACGTCTGAGATTACTGCAGTAGAGTCCATACCAGAGCTTCCTCTGCCTCCATCCCCTACTGCTATTTCTCCACTTGCTCGAAGTACAATTACTTCTCCCACCTCTGTTGCTCTTAGTAGCCAACCAATATTCACCACTGCAATTGATGACAGATGTGAACTCTCTTCCTCAAAAGAAGATACAATTCCTATTCCCAGCCCCACATCTTGCACAGAAGCATCAGATCCTTTACCAACAGATGAAATTGATGATGATATATGCAAGAAATCTTGTAGTGTAGCACCAAATGATATTCCACTGATTTCTAGTACTAACCTAATTAATGAAATGAATGGAGTTAATGAAAAATTACCAGCCACGGAAAGCATTGTGGAAATAGTAAAACAGGAGGTGTTACCGCTGACTCTTGAATTGGAGATTTTGGAAAATCCCCCTGAAGAAATCAAAGTGGAGTGTGTCCCAACTCCCATCACCCCTTCGATAGTTCCCTCCTCTTCTCCGTCTCCTCCAGCTCCTCCAGCTTCTCCTTCTCCCACACCAGTTATCGTTCCTGCTGCTGCCACCAGTGTTAATACTGGTCGTGGTTCCACCGGAGTCCAGAGAGCCTTCGAAGAGGGCGAGAACATAAGAACTTGCCTTAGTGAAGATGCAAAAGAGATTCAGAACAAAGTAGAGGTAGAAGCAGATGGGCAAACAGAAGAGATTGTGGATTCTCAGAACTTAAGTTCAAGAAAGAGCCCAGTCCCAGCTCAGACAGCTATACCTGCACCAAAGATGTGGAAGAAACCAAAAGACCGGACCCGAGCCACTGAAGAGTCGTTAGAGGCAGAATCAGAGCCTAAAGCTGAAGAGGAGCTTTCAGGTGACAAAATACTTGAATCTGAACAGGATAAAATGAGCCAAGGGTTTCATCCTGAAAGAGACCCCTCTGACCTAAAAAACGTGAAAACTGTGGAAGAAAATGGAGAAGAAGCTGAGCCTGTACGTAATGGTGCTGAGAGTATTTCTGAGGGTGAAGGAATAGATGCTAATTCAGGCTCCACTGATAGTTCTGGTGAAGGGGTCACATTCCCATTTAAGTCAGAATCCTGGAAGCCTCCTGATTCGGAAGGCAAGAAGCAGTATGACAGGGAGTTTTTGCTGGATTTCCAATTCATGCCAGCGTGTATTCAGAAACCAGAGGGCCTGCCTCCCATCAGTGATGTGGTTCTTGACAAGATCAATCAACCAAAATTGCCAATGCGAACTCTGGATCCTCGGATTTTGCCTCGAGGACCAGACTTTACTCCAGCCTTTGCAGATTTTGGAAGGCAAGCCCCTGGTGGAAGAGGTGTACCTCTGTTGAATGTTGGAGCACGGAGATCTCAGCCTGGCCAGAGGAGAGAGCCCAGGAAGATCATCACGGTCTCCGTGAAAGAAGACGTGCACCTGAAGAAGGCAGAGAACGCCTGGAAGCCCAGCCAGAGGCGGGATAGCCCAGCCGAGGACCCCGAGAACATCAAGACCCAGGAACTTTTTAGAAAAGTTCGAAGTATCTTAAATAAATTGACACCACAGATGTTCAACCAACTGATGAAGCAAGTGTCAGGACTTACTGTTGACACAGAGGAGCGGCTGAAAGGAGTCATTGACCTGGTCTTTGAGAAGGCTATTGACGAACCCAGTTTCTCTGTGGCTTACGCAAACATGTGTCGATGTCTAGTAACGCTGAAAGTACCCATGGCAGACAAGCCTGGTAACACAGTGAACTTCCGGAAGCTACTACTGAACCGTTGCCAGAAGGAATTTGAAAAAGATAAAGCCGATGATGATGTCTTTGAGAAGAAGCAGAAAGAACTCGAGGCTGCCAGTGCTCCAGAGGAGAGGACAAGGCTTCATGATGAACTGGAAGAAGCTAAAGATAAAGCCCGGCGGAGATCCATTGGCAACATCAAGTTCATTGGAGAACTCTTTAAACTCAAAATGCTGACTGAAGCCATCATGCATGACTGTGTGGTGAAGCTGCTGAAGAACCACGATGAAGAATCCCTCGAGTGTCTGTGTCGCCTGCTCACCACAATTGGCAAAGACCTGGACTTTGAGAAAGCAAAGCCACGTATGGACCAGTATTTTAATCAGATGGAGAAAATTGTAAAAGAAAGAAAAACCTCATCTAGGATTCGATTCATGCTTCAGGACGTAATAGATCTAAGGCTGTGTAATTGGGTATCACGACGAGCAGATCAGGGGCCTAAAACTATTGAACAGATTCACAAAGAAGCTAAAATAGAAGAACAGGAAGAGCAGAGGAAGGTCCAACAACTCATGACCAAAGAGAAGAGAAGACCAGGTGTCCAGAGAGTGGATGAAGGTGGGTGGAACACTGTTCAAGGGGCCAAGAATAGTCGGGTATTGGACCCCTCAAAATTTCTGAAAATCACTAAGCCCACAATTGATGAGAAAATTCAGCTGGTACCTAAAGCGCAGCTGGGCAGCTGGGGAAAGGGCAGCAGTGGTGGAGCCAAGGCGAGCGAGGCCGATGCCTTAAGATCAAGTGCTTCCAGTTTAAACAGATTCTCTGCTTTGCAACCTCCAGCACCTTCAGGGTCTGCGTCATCCACACCTCTAGAGTTTGATTCCCGGCGGACCTTAACTAGTCGAGGAAGCACGGGCAGGGAGAAGAATGACAAGCCCCTCCAGCCTGCAGCAGCTCGGCCGAACACTTTCATGAGGGGTGGCAGCAGTAAAGACCTGTTAGACAATCAGTCTCAGGAGGAGCAGCGGAGGGAGATGCTGGAGACCGTGAAGCAGCTCACAGGAGGCATGGACGTGGAGAGGAGCAGCGCTGAGGCGGAGCGAAGCAGGACCAGGGAGCCAGTGACAAAACCGGAAATTCCAGTAACATCAGCCTCTGACAAGCCCGCGTTGTCAGAGGAAGAGATGGAGAGGAAGTCCAAATCTATCATTGATGAGTTTCTACACATTAATGATTTTAAGGAAGCCATGCAGTGTGTGGAAGAGCTGAACGCCCAGGGCCTGCAACATGTGTTCGTGAGGACGGGAGTGGAGTCCACCCTGGAAAGGAGCCAGATCACCCGGGATCACATGGGCCAGTTACTGTATCAGCTGGTGCAGTCAGAAAAGCTCAGCAAACAGGACTTTTTCAGAGGTTTTTCAGAAACATTGGAATTGGCAGATGACATGGCCATTGATATTCCCCATATTTGGTTGTACCTTGCTGAACTGGTGACTCCCATGTTAAAAGAAGGCGGAATCTCCATGAGACAACTCATCACAGAATTTTGCAAACCTTTACTTCCTGTTGGAAGAGCTGGAATCTTGATTTCTGAAATATTGCACCTTCTATGCAAACAAATGAGCCATAAGAAAGTGGGAGCCCTATGGAGGGAGGCTGACCTCAGCTGGAAGGACTTTTTACCAGAAGGGGAAGATGTACATAATTTTCTCTTGGAGCAGAAGTTGGACTTTTTAGAGTCTGACAGTTCCTGTTCCTCCGAAGCACTTTTGAAGAAAGAACTCTCTGCCGAAGAGCTGTATAAGCGACTCGAGAAACTCATTATTGAGGACAAGGCAAATGATGAACAGATCTTTGACTGGGTAGAGGCTAATCTAGATGAAAGCCAGATGAGTTCACCTACATTCCTTAGAGCTTTAATGACAGCCGTCTGTAAAGCAGCTATTATAGCCGACTGTTCGACCTTCCGAGTGGACACTGCTGTTATCAAGCAGAGAGTGCCGATCTTACTCAAGTACCTAGACTCAGATACAGAGAAGGAACTGCAAGCACTTTATGCACTACAAGCATCAATAGTAAAACTTGATCAACCTGCCAATTTGCTACGGATGTTTTTTGATTGCCTGTATGACGAGGAGGTGATCTCTGAGGATGCCTTCTACAAGTGGGAGAGCAGCAAGGACCCGGCAGAGCAGAATGGGAAGGGTGTGGCCCTGAAGTCTGTCACGGCGTTCTTCACATGGCTGCGGGAAGCAGAAGAGGAGTCTGAGGATAACTAAAACTTCAAATACACAAAACGAAAGAAAAGAAACAATTTAAGTATTTTTTTAAAAAGTTTCACGTCTTCGCCAATCACAGTGCAGCAAGGCCAATTCTCGCAGAAACCCCCACGTGTGCACGAGTGGGAAAGGGGAAAGAGAAAAAAAAAGGTGATCATGGAGGAAAAAGGTACTGGAAAAAAAGTAAACTTCAAACCTGAGGGCGGGAGCACTAAAACCAAAATACATGTATTATTTATAGAAAATATTTTCTGTTTTAATCTTTTCTTTTTAAATGAGGACTCATACTTTAAAAAAAAACACATCTGTTTAGCAAAAAAAAAAAACAAAAAAAAAAGTTGAGAACTTTTAATTTATTTTAAGGACTGCAAATGCCAGTGTAATTTTTTAATTTGCAGTTTCTGTAAACAACTTGTATAATAGAAAAGCAGAGAAATAAATTTCCCTCCCCTTCAGATGCACCTCACGTTTGTTTTAAAGCATAGTATTTAGTCCAGATTTGAGAAGGTTTGGGGTGAACAAGGTAAGAAAGATTTTTTTTTTTTTGGCATCAGATCTTTCTGCCTGCCTCTCAGCTTGCTTCAGAAAATAAAAAAATCACAATAGTAATCAAAACATACATAACCTTGGAACAGAAAGAAATGCTGTGGACCAGAGAACTCCAAGAATTGTTCAAAAAAAAAAAGTGCTACCCTGGGAAAAGTACTCTTAATACTTTTGAAATCTTTAGAGCAACTTTAAGGCTTGTAAATACATAGAACAAATATTTAAAAAAAAACAAAACAAAAAGAAATTGACTCAGTACTATTTCTTTTCACTTTCAAAATATAAAGAACAAAATAAAGGCAAACATTGCAAGTTTAAAAGAAA EMBV3_10042 GCTCAGCTGGAATGTTGTCACCTCCACTAGTTTTGTTCATAGTAATGCCTCCTAAGGTCC Gene BVV0102_047264 + 0 NULL GK000027.2:15623328-16625483 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35286 CCAGTATTGTGGCAGAAACATCTGAATGCTGTCACTCAGGCGGAACTTAATAAGAAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39083 ATCTGAGGGCCAGATCGTGACCCCATAAAGGCTCAAGGAGAAAGACGAACACCAGTTCTG Variant GeneID:520302|VRK3:NM_001046251:256_cdna 211^344 2 EMBV3_41311 GeneID:520302 18 GENE VRK3 MGC133825 vaccinia related kinase 3 EMBV3_39717 GGTAGCTGCCGAATGTTCTACTGGTACATCGACAACTGTATGGAGCGATGGACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_25962 TGTGCAACGCACCACAATCTTAGGTCATCTTCTACATGATCCAGGCCGTGAAAAGGCTTG Gene BVT0101_004894 + 0 NULL GK000019.2:40372721-40379411 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096859 TCONS_00096857 TCONS_00096860 TCONS_00096856 TCONS_00096858 TCONS_00096861 1 XLOC_058075 Coding TCONS_00096859 XLOC_058075 Coding Coding FBXL20 19:40375096-40478825 j TSS71886 7370 1 TCONS_00096859_1 291 14 0.929083757519667 0.00256044221510289 0.00087284737542637 0.00246521091939982 0.000530087508910626 0.00045872286319684 0.0005253988483796 0.000915988099357499 0.0020175555103862 9.8942512818881e-07 0.00143143492474478 0.000283755645510718 0.000322194518459049 0.000655310520692477 0.000121769506590433 0.000453839635654929 0.00113794248303293 0.000565374048445196 0.000626784145160672 0.000286688737654356 0.000592740817425751 0.000559377276131836 0.000645050424455476 0.000307980571717029 0.000203837966383997 0.0026433311358698 1.35181307704665e-09 0.00104492837412337 5.20344143739851e-05 2.51368438726212e-05 0.000186080833977157 NM_001035096.1 FBXL20 Bos taurus F-box and leucine-rich repeat protein 20 (FBXL20), mRNA. 0.0 1422 100.00 0.106784260515604 NM_032875.2 FBXL20 Homo sapiens F-box and leucine-rich repeat protein 20 (FBXL20), 0.0 2048 84.52 0.249389416553596 TCONS_00096859_1 sp|Q58DG6|FXL20_BOVIN FXL20_BOVIN F-box/LRR-repeat protein 20; 0.0 559 100.00 0.948453608247423 6 noncoding 0 0 0 0 -0.511673676881646 0.117971361686946 0.0515708951172882 0.481122436171901 GAGAAGAGAGAAGAGCTAGCGACGAGCAGTCGTCGCCACCACAGCGGGAGAAGGAGGAGGCCCTGCTGGAGTCTAGAGGTCTCTCCTCCCCGCCGACGGCCCCATCCCGCTGGTCCTCTGCCTCGTCTCGGTACCGGAACTCCGGGGCCTGCCCGGGGCCCCCAGTCTTTGCACGCCGCAGCGCCCGGCCCCGGCCGCACCCGCCGGCCCCATGAGGAGGGACGTGAACGGAGTGACCAAGAGCAGGTTTGAGATGTTCTCAAATAGCGATGAAGCTGTAATCAATAAAAAACTTCCCAAAGAACTCCTATTACGGATATTTTCTTTTCTGGATGTTGTTACCTTGTGTCGCTGTGCTCAGGTCTCCAGGGCCTGGAATGTTCTAGCTTTGGATGGCAGTAACTGGCAGCGAATTGACCTGTTTGATTTCCAGAGGGATATTGAGGGCCGGGTAGTGGAGAATATTTCAAAAAGGTGTGGGGGCTTTTTACGAAAGTTAAGTCTTCGTGGGTGTCTTGGAGTAGGAGACAATGCTTTAAGAACCTTTGCACAAAACTGTAGGAACATTGAAGTGCTGAATCTCAATGGGTGTACAAAGACTACAGATGCTACATGTACTAGCCTTAGCAAGTTTTGTTCCAAACTCAGGCACCTTGACTTGGCTTCCTGTACATCAATAACAAACATGTCTCTAAAAGCTCTGAGTGAGGGATGTCCACTGTTGGAGCAATTAAACATTTCCTGGTGTGACCAAGTAACCAAGGATGGTATCCAAGCTCTAGTGAGAGGCTGTGGAGGTCTTAAAGCCTTATTCTTAAAAGGCTGCACACAGCTAGAAGATGAAGCTCTCAAGTACATAGGTGCACACTGTCCTGAACTGGTGACTTTGAACTTGCAGACTTGCTTACAAATCACAGATGAAGGTCTCATTACTATATGCAGAGGGTGCCATAAGTTACAGTCCCTCTGTGCCTCTGGCTGCTCCAACATCACAGATGCCATCCTGAACGCTTTAGGTCAGAACTGCCCTCGGCTTAGAATTGCCATGAGCTTGAAAAGATGGACCTGGAAGAGTGTGTTCAGATAACAGATAGCACATTAATCCAACTTTCTATACACTGTCCTCGACTTCAAGTATTGAGTCTGTCTCACTGTGAGCTGATCACAGACGATGGAATTCGTCACCTGGGGAACGGGGCCTGCGCCCATGACCAGCTGGAGGTGATTGAACTGGACAACTGTCCCCTAATCACAGATGCGTCCCTGGAGCACTTGAAGAGCTGTCACAGCCTCGAGCGGATAGAACTCTATGACTGCCAGCAAATCACGCGGGCTGGAATCAAGAGACTCAGGACCCATTTACCCAATATTAAAGTCCACGCCTACTTCGCACCTGTCACTCCACCCCCATCAGTAGGGGGCAGCAGACAGCGCTTCTGCAGATGCTGCATCATCCTATGACAATGGAGGTGGTCAACCTTGGTGAACTGAGTATTTAATGACACTTCTAGAGTTACCGTGGATCTCCATTGGAAGCAACCCCAGTGTTCCGGGCAAAGGTTACAAAGTGAGGGCGGTGTCCAGATCCCCAGAGCCACACATAAATACACATACCCACTCTCACCCTGACCCAGTCTGTCTCTGTGACCAGGGGACTGAGTTCGTGCTGGCTTTATCATGTGGATTGGTAAAACTTAACCATTCCTGTTGGATGTGCCCAGAAGAAAATCATAAGCAAGGTAGATGGAAGGGGGCATTCCAGCAAACCCAGTTTTACTGCTACTGTGGTTTCTTTATTTTGTTAAGGGGTTTCTTTGGCAATTTTGGAACAGCAACTGCAGTCCTCCAGGGTCAAGGAAAGCATAGAAAAACAATACATGTTGTATCAGGGACCAGAGGGAAAATTTCTTTGCATCCTATAAATGGTAGCCATCCATTGTGAGATGACTAAAGAGCTGCTGTGCTTCCTTGTTCCCATGCCAACATGCTGAGCATGCTCACAAAGAAGGCTTGTCCATTCCTCCTACTGTGTTTTAGTATTTGGCCCAGAGGTTTGCTAAATGGTTGCATTGAAATCACTGTGGTCCAGATGTGATGACTTATTCACTCAAATTGTCACTGTCTGTAGCACACTGTGTACCTGTCTTTCATTCTCTGTTGCTCCCTCCTGCACTCTTGCTCAATCTGTCATCTGTTCATAGTCTGCTTACTCACACTCAGTTGTTACTCCTTTGCTGTTGTTGTGTTTACAATTTGCATTTTGGATAATTAGTTGGGGTTACCAAACATTTTTAAAAGAGACATTATCAATAAATATTTTTTTAATTCTAAATTTTACCATTAGGGGACCCTGCCTGAATCTTTGCCAGTCAAGAAAAATTATGAGAAGAAATTGAGCTAAGACTATTTTGATGAAAACAAACTTTGCCTTTTGGTCTTTGTTGTATCTTGTGATAAATGATAATATGCATGATACACCCAGTATTCCCCTCTGCACATTTTTCCTTCCATCTAACTTAATGAGGAGAGAGAAATGCATTATTAGAAAAGAGTGGAATGGCAAATCCCAAAGCTGAAACTGAAAGCCACCGCCACCAAAGCTCAAATATTGTGTGTTGACCAAAATCTAGGTGTGATCAGTGGCATCTCTGATTTGTGCCTGTGAGATTTGTTCTACTTTAGCAGGAATGCTGCTCAAGGAGTTGTGCGATTGAGCTGGGCTGTTTCTCTTTTTTTCCTCCCATTTCAGCTTATCAGGGATGCGAGAATGACCCTATCACAGCTGGTCAACTGTACATCAGTGTTTGGTATCATATCTAATGTTGGAGCCTCAAAGGACTAGAACCTTTTCAGAACCCATCAGCCATCTCTCTCTTGAGCACAGACTTTCCATGAATGAAATATCAGAGAAGCCAGGTAAAGGCATTGGGGTGGCAGAAATAGAACATTGAGAGGAAGTAGGGGGTTCAGTGTGTTGGGCAGCCTGGTCACCAGAACTTAGAGCAGAGTATTCAGTGTCCATGACTCAAAGTCAAAGAAGAAGTTCCCCCCCATCAAAAAAAAAAAAAAAAAAAATCATAGAGGATGAGGGAAATAAAATAAGTTTCTGAAGTGTAAGAAGTAGATTTCTAAACATCAAGGTTAGAAACCTTGTGTGATTTTTTTAATAGGATGACTTTTGGTTTTTTAGGACATTAATGTGCAACGCACCACAATCTTAGGTCATCTTCTACATGATCCAGGCTGTGAAAAGGCTTGTTTTAATGCTGCAGGTGTTAGTAATACTAGCATATGTAAGAATAAAATGTGATTTACTTTTCCATAAGCAATTAGTTGAAAAGGTCCTAGGAACCTACTATCCACCATTAGTTAGCATGTTAAATTTATTTTAAATCTAATTTTATTATTACACCCTTTTAAAAGCTCAAATTATATGTATTTTTCATTTCCTTTCCCTTATCCTCTTTTCAGGTTACCACATAAGGAATATATTTTTTAAAAGTGAGACCCACTCTCCTGGCTATATCCCACATATATACATATACACATTTGCACACACACTTCTAAATGTGGTTGAAAATATTCAGATCCCCAGGTAACTCACTCAAACAAAACTTATATATATATATATGTATGTATATGTATTTAGGGGGCAACAGCTCTAACATACAAAGTTTAAAAAAAAAAAAATAGTGCCTGAATAAAACCTTGATTTATTAGTGAGTGTGGATTTTAATTTCCCAACAGTTGAAGTTCTTGAGGTACTTCTTTATTTAAAAAAGGAACAAACCTATTCACTAGTACATGAATGTCTTGAAAATGCTGTTTCTCTTCTCAAAGAGTGCACCCCTGTGCAAGTCTCTGCGGGCTTGTGCAGGTGAGAACAGAGTCAGTGAGAGCATAAAGGCCCTGGAGTATGCAGCACTGGTGTGTATATGGTCAGGCAGGAGCCTTGTTCCTTTCTCAAGAAAACTTGAGGCCCATAAAGCTTGGAAGGACATGTATTTTTATGCCAATCTGAAACCTGTGTCGGTTAATGATACAGGACTTTGAGAACCCATGGTAAGTTTTGGTCAAGTGGAAAGGGTCCTGTCATTTGAACGTAATATTTCCTGACTCAACATTAGGAAAAACTTATTGGTCTCTTTGTCTGATTCTGGAGTGTGCCTTCAATTAAAAAAAAAACCAGAGTGAAAAGTGAGAAGAGATTTGGGCAAAGTAAGAAGGTATCCTCAAAGTTATTACACATCCAGATCATCTCTTTTCTAAGCATCCTTTTCCCCTTATGGTTTCCAGCATCATCAGTATCTTTTACATCTTCATTGACCCTACCTATGAAGGGAATGATTCCAGCTTTTTTTTTTTTTTGCATAGACTTCTCCCATTTCCTTTATATACCCATCCTTGCCTTCTATTTAAAGCTTCACTCCCAGTGATACTGCTAATTTATTTCCATGTCTTCAATCTGGCTTCCTCTCTGAATTCTTGTCCTGATCTGGGCAACCTTGAATTCAGTAACTGTAAGGCAGCTCAGGCCATTTTTCACTGAGTGATCTTTGGTGTGTGCTTACTGAATTTGAAATCAAACTGTCAGATATAAGGAATAAGGGAATCTGGCTTCTTCCCTTTTTTCCAATATTTGGAATATGAAAGCACATTGTGCTTTTATGTAAAAAATATTTCTCATCTTATTCTGTTCTTTAGTGGATGTAAAAGTATTACTTAAGTGGTTTTTATAAATTTCCACATCCATTAAGTTGATTTAGTAGACATGTAAGTCAGAAATTTTTCATATTCCTTATATCACCTTTTAGAGAGAAATCTGGTGAATATTTTTATGATGCTTTATTTCAGGCTTTCCAAACTGTTTGAATGGTTCAATATAGCTACAGTGCTGTAGCAGTCAAGTTCTTTTATTTCTTCTAATTGCCTTGTAAAATGCACTGTTACTGGTTTGATAACCCACAAATGCCATGGGAGGCTAAACAAAGTATAAGTTGGAACCTGTCTTAGTTTGAAGTTGTTAGGAAGTGTGAGAGTATCCCAGGAAAGAAGAGTTGGTTTCCTACCTGCCTATGGGCAGCGTATCCTTGGTGACTATGTTATTTAGAGCAAGGAGCACTTGGTCATGGTGGACCCTTGTCCATTTAATGTTTATTGAGCTGAAAGTCAGATTGCTCATGACAACTGCCACGAGAGAGGAAGGGTTTAAAGGAAATCGGTCTGTTCTGCTTTTTTACCCTCCCTGTGTGCATGATTTAAGGTTAATTTTCTATCCCTGTTGTGCATCCTGGCTGACACTCCTTCATTGGTATGCTTTGAGCTTCCAGAACATTTTATTAAAAAATTGCCTTCTCTATCTGCCCACCAGTTCTAGGATCTTTAACCACCTCAAACCTAAGCCATGTGAATTAGTCAAGTCTTGTTTGAGAAGACAGATAGGATGTTTCATTGGAGGTCTTGAGGCAGAACCCTCCCCCTTACAATGATCTTGAACCAAAGAACCCTAAAGTGGTAGGAGGGTGAGGGGAGTCACAAAGTCTCAGCCTCTCACCTTTATTTCTATCATAAATGTTAATTAGAAGATTGGAACATACAGAAACCTGTATACAACCATTTCAGTAGGGTATAATTAATCCAGGTAATTTGGCTTGTATTTGCTGTGTCCAGATGTCCAAATGTAACATGTCGACATCTCCAGCAAGAGAGCATGCTGCTCTAACTTGCCCTCCCACTTGAAACAAACTTTCTACCATTTGAGGCAAGTGAGTTTTCTGCATGAAGGGCTTCTGCAGCCCACCCATCCCCCTTCCCCATACCCCAAGGCAAGTCTACCTGTTTTGCCCATTTTTATCCTTAAGAACATCAGTTCCACATCTCGGGAACCTTTGATCCTTAAGAAAGTCAGTAAGAACTTCTCAGCTGAGTCTGAGTGAATCTTTGGAGCCCAAGAGAGGTACATTTAGTTTTCAGCAGGAAAAAAAAATTGTTGGACAGGTTTACATGGGTGTTAAGAAAAAATGCCGTAATGCAATTCTTTCATCTCTGCCTCCTGTTTTTGTTGAGTAAGCCCTTGGTAGAGGTTAGTTCCCAGGTGTCGGGACTCAGTGTTTCCTCAGGCAGGGTGGTTCACTGCCCTTTTAGGAAAAAGAACCATGAACAACCAAAACTATATCAGTTGACCCTTTTGGTTTTCTGTATTTTTCAGTGTCTTGTTTTGAAGAATCAGGGTGGGGAAATGGTAGTTGCAATTCAAAGTGAAGGAGAAAATTGGTTCTGGAACTGGGGTACTTTGCTTCAGGTACGAGCATCGGTCCTGAATATGTAGAAACAACTGCCTCGCCTGTAGGCAGATTTACTTTCCATCTAATGAACTCCATGCCCTTCTTCCTGGCAAGGAGGGCTTCTACTTTGCACACAGCAGACCAGTGTCACCCAGAAAGGGATCGGCACCTCTGAACACCACCAGTGCTTCCCAGCAACTTCTGGGTGTGGTTTCCACCAGAGCAAGAGCAGGTAGGAAGTAAATGAGAGTCCCCATCTCAGGGAGAGATGAGGGAAGAGAGCTGTGCAGACACATGTATTCTCAACTGCCAAAGCCCCAAGAACGCAGGAAAACCTTTGAAGTAATTTCTTTTTTTTTTTTTTTAATTAAAGTGAAGGAAGAAAGCTTTGCCCCACTAAGTTTTGGCTTGCAGCGTCTCTTATACTGCTTATTACTATTAACTCAGATCTGTCCCACACTGCTGCTCACATACATGTATGTGCTTGTTACCTTAGCCTAACCCTTCTCATTCCCTGATGTCATTATTCTTTGTTTTCTTTTTTTTATGGCACTAGTGAATGAGAACCTAAAGTCTTAGAAAATCCTAACTTGAAAAAGGAGTCTCTAACTGGCATGGTTTGATTAATTCCTTTACCTTTCCCTGCCTAAAGACTTGAATGATTTTCTTTCCTAGTGCTATATAATAGACCTATAATAAGTGAAACCTTTGCTGCTACTTTTCTGGGTTTACATCAGTTTTTTGTTTTTTTTCTCCTTCCCTTCTCTTAAGAATAATTTCTTATCTGTGCTTCTCTGATGACTGTTAATTTCTAATAAGTACAGGAAGAGGTGAGCCTGAGATTTCTTCTCTCACTTCCCTCCTTACCCTGCCCCTGAAAAATACACTAACCTCTAACATATACAAGATCTGTGAGATGGGGCTCATCATAAGATACTTGGGGATTTTTTTTTTCCCCTCACCATGCTGCAGCTCTCAGAGTTGGCCCCTGAGGATCTGTGACTACTCAGTCCGAAGAGTTGCTCCAGGGAGAGAAAGGCCTTAATTTTGCCTTTCTCCCTTCCTGTTTTATGATCACCCTTCAGA EMBV3_22075 AGCTTGGGAAGGGAGAGGGCTTGGGTGTGGCCTCGTTGGAGGTTGATCTTGTTTTTGTTT Gene GeneID:281188|GDI1:NM_174064:10_cdna Constitutive 0 NULL GeneID:281188 X GENE GDI1 NULL GDP dissociation inhibitor 1 EMBV3_08649 CTTGATGGGAGATCATCTGTAAAGTGAGATTAATGACCCTACCTAGCAGTGGCGTGAGGC Gene BVV0102_065421 + 0 NULL GK000008.2:63669725-63676508 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39780 GCCAAGAGAGATAGCAAAACTAACATCTGGAAGAAGCGAGAGGAACGCCCACTGATTCCC Gene GeneID:614438|LOC614438:XM_002685251:50_cdna Constitutive 0 NULL GeneID:614438 2 GENE LOC614438 NULL similar to KIAA1946 EMBV3_24396 ATTCATCTCCGCCACGTTCTATCATTGTGTATCGAGATGGAGTGGGAGACGGACAGCTTC Gene GeneID:615479|PIWIL3:XM_002694612:138_cdna Constitutive 0 NULL GeneID:615479 17 GENE PIWIL3 NULL piwi-like 3 (Drosophila) EMBV3_35210 CCGCTGACCGCAAGCTCTCCAAGATCGAGACCCAGCCCAAACAGATCTGCACCTTCTGCC Variant GeneID:615157|SCXB:XM_002692545:166_cdna 353^523 1 EMBV3_16012 GeneID:615157 14 GENE SCXB NULL similar to scleraxis homolog B EMBV3_32918 GGTCATCCCCGACATCCCCAAGGACATCAGCCAGCAGATCCACAAAGAGAAGGTGCTCAT Gene GeneID:532126|ANO1:XM_002699423:92_cdna Constitutive 0 NULL GeneID:532126 29 GENE ANO1 TMEM16A anoctamin 1, calcium activated chloride channel EMBV3_08438 GGATCCACGAACTTCAGGAGACAACTGGAGATATTGTAGAAGGAAAGGTCAACAAAGGCA Variant GeneID:528174|GPR133:NM_001034564:111_cdna 381^476 3 EMBV3_06136 GeneID:528174 17 GENE GPR133 NULL G protein-coupled receptor 133 EMBV3_01863 GCATGAGGAATAGGAGCGTGAACATGGCTGCAGTTTTCCTTGCTTGAGCTTGCTGTGATC Gene GeneID:100296328|LOC100296328:XM_002698664:135_cdna Constitutive 0 NULL GeneID:100296328 27 GENE LOC100296328 NULL hypothetical protein LOC100296328 EMBV3_33171 TCCTCCTGCACGTGGCCCTCGGACGCTGGACCTGACGAAAAAGCAAATTCAAGAGATTTT Gene GeneID:100294775|LOC100294775:XR_083655:61_cdna Constitutive 0 NULL GeneID:100294775 4 PSEUDO LOC100294775 NULL hypothetical LOC100294775 EMBV3_41795 ACTCTGGTCAGTATCGTGAGCTGGGCGGTGCTATTGATTCTGGTGCAGCGTATGTATTAG Gene GeneID:515124|ATL3:NM_001098978:9_cdna Constitutive 1 NULL GeneID:515124 29 GENE ATL3 MGC152382 atlastin GTPase 3 EMBV3_30248 TGAAGAAGTCCGTCCAGAAAAACGTTAAAGGTGATGTTTTGATTAGTGTTGGCTATGCAA Variant GeneID:537386|C25H16orf65:NM_001076094:368_cdna 109^288 3 EMBV3_40267 GeneID:537386 25 GENE C25H16orf65 C16orf65 MGC134002 PDZ domain-containing protein C16orf65 homolog EMBV3_13923 GACCGCTTCTATAACAACCATGCATTCAAGGAATCTCCTGAAGAAGACAAGGACATGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11214 TACGGTAGCAAGTTCCAGCTGCGGTCAAGTGAGCGGTCTGCAAAAAAGTTCAAAGCCAAG Gene GeneID:614870|POP4:NM_001034770:429_cdna Constitutive 0 NULL GeneID:614870 18 GENE POP4 MGC137348 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) EMBV3_33022 GGCAAGAATATTAAGGCTCTCCGTACAGACCATATTGAGTATCAGTGCTGATATTGAAAC Variant GeneID:528135|HNRNPK:NM_001034562:40_cdna 448^491 3 EMBV3_40324 GeneID:528135 8 GENE HNRNPK HNRPK MGC127613 heterogeneous nuclear ribonucleoprotein K EMBV3_42373 AGAGCTGATATCATGAATGACTAGTGACCCAACTAATAAAAGTTTAGATGAAAGGGAACC Gene BVV0102_237704 + 0 NULL GK000005.2:61392803-61446534 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33344 GCTAGCAGCAATCACTTGGGGAAGACACTCCAGTTGCTGATGGACAGAGTGGATGAAATG Gene GeneID:506873|EIF3H:NM_001025322:20_cdna Constitutive 0 NULL GeneID:506873 14 GENE EIF3H EIF3S3 eukaryotic translation initiation factor 3, subunit H EMBV3_00876 GTTTTAACACGTTTGTGTCACTACCTCCACAATCAGGATGCAGAGCAGTTCCGTCCCCTC Gene GeneID:505912|DUSP18:NM_001034259:53_cdna Constitutive 0 NULL GeneID:505912 17 GENE DUSP18 MGC134377 dual specificity phosphatase 18 EMBV3_18349 CACCCGGATATGGACCTTTGCTACCTGTATTAATGCCAGTGGCCTCATTTGCTGTATCAT Gene GeneID:614292|AKIRIN2:NM_001110087:32_cdna Constitutive 1 NULL GeneID:614292 9 GENE AKIRIN2 Akirin-2 C9H6ORF166 MGC128934 akirin 2 EMBV3_00568 CCAAGGTCCCTCAACAGTGGATGCTGCCTTTCTCTGGGATAAAAAGCTCTACCTCATCCA Gene GeneID:534509|HPX:NM_001034612:40_cdna Constitutive 0 NULL GeneID:534509 15 GENE HPX MGC128009 hemopexin EMBV3_35260 ATTGGAGCAAGGATGGAGAGGCAGAGAAGAAACAAAGGAAAATAATGGGGCAGGTGGGGC Gene GeneID:517533|S1PR5:XM_002688842:162_cdna Constitutive 0 NULL GeneID:517533 7 GENE S1PR5 EDG8 sphingosine-1-phosphate receptor 5 EMBV3_32830 CCTCTTGCACTGGCTGACGCACAGAGAAACCTGCTGAACAGTCCCAGAAGTATCCATTTC Gene GeneID:100300734|LOC100300734:XM_002685978:301_cdna Constitutive 0 NULL GeneID:100300734 3 GENE LOC100300734 NULL hypothetical protein LOC100300734 EMBV3_16249 GAACACTCAACTCCTCTCACCACCTCAACCCCACTCAGCCCCACACACCACCATGACCGT Gene GeneID:618938|LOC618938:NM_001099392:234_cdna Constitutive 0 NULL GeneID:618938 19 GENE LOC618938 NULL similar to Keratin associated protein-like EMBV3_41738 AGCCCATACCTACAAGGCTGATAGAGAGAAGTACAACAGACTAGCAAGAGAATGGACACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07967 AACAAGAGCCCTCTAGCCAAGGATCTCAGAGTGTTTTACAGACACATGAACTGGGAAGTG Gene GeneID:510523|TMEM154:XM_002694322:59_cdna Constitutive 0 NULL GeneID:510523 17 GENE TMEM154 NULL transmembrane protein 154 EMBV3_11684 AAAATTCCAACATATGGACGCTAAACAACACGCTGCTGAATAACCAACAAATCACAGAAG Gene BVV0101_014662 + 0 NULL GK000027.2:5833572-5939707 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00010367 TCONS_00240474 TCONS_00031179 TCONS_00187576 TCONS_00019989 TCONS_00022064 TCONS_00224115 TCONS_00152943 TCONS_00124121 TCONS_00135549 TCONS_00250932 TCONS_00166787 TCONS_00249014 TCONS_00199804 TCONS_00206484 TCONS_00090401 TCONS_00198585 TCONS_00148277 TCONS_00023334 TCONS_00251704 TCONS_00007362 TCONS_00048822 TCONS_00152648 TCONS_00141422 TCONS_00207067 TCONS_00254568 TCONS_00055355 TCONS_00065822 TCONS_00252488 TCONS_00233373 TCONS_00071184 TCONS_00023027 TCONS_00166080 TCONS_00123172 TCONS_00220656 TCONS_00253241 TCONS_00055299 TCONS_00123617 TCONS_00251853 TCONS_00130261 TCONS_00206708 TCONS_00231277 TCONS_00165811 TCONS_00070956 TCONS_00198626 TCONS_00198800 TCONS_00206863 TCONS_00221437 TCONS_00251889 TCONS_00019196 TCONS_00017462 TCONS_00059437 TCONS_00198662 TCONS_00071120 TCONS_00055859 TCONS_00056147 TCONS_00189807 TCONS_00190575 TCONS_00066280 TCONS_00251004 TCONS_00007007 TCONS_00007066 TCONS_00249913 TCONS_00176778 TCONS_00197973 TCONS_00166527 TCONS_00032586 68 XLOC_131641 XLOC_005918 XLOC_147138 XLOC_017428 XLOC_113621 XLOC_010667 XLOC_012735 XLOC_137411 XLOC_092708 XLOC_075673 XLOC_081772 XLOC_153875 XLOC_101623 XLOC_151957 XLOC_121456 XLOC_125006 XLOC_055182 XLOC_120239 XLOC_090159 XLOC_014001 XLOC_154645 XLOC_002923 XLOC_028953 XLOC_092413 XLOC_085850 XLOC_125586 XLOC_157500 XLOC_033163 XLOC_040541 XLOC_155429 XLOC_142855 XLOC_042956 XLOC_013697 XLOC_100918 XLOC_074726 XLOC_133973 XLOC_156182 XLOC_033107 XLOC_075169 XLOC_154794 XLOC_078972 XLOC_125229 XLOC_140766 XLOC_100651 XLOC_042733 XLOC_120280 XLOC_120453 XLOC_125383 XLOC_134752 XLOC_154830 XLOC_009876 XLOC_009039 XLOC_036403 XLOC_120316 XLOC_042893 XLOC_033667 XLOC_033950 XLOC_115844 XLOC_116610 XLOC_040994 XLOC_153947 XLOC_002569 XLOC_002628 XLOC_152856 XLOC_106552 XLOC_119632 XLOC_101365 XLOC_018826 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_11670 GAAAGCATTCAACACTTGTGTCGCTCACATCTGTGTCTTCCTCCAGTTCTACTCCCTTGG Gene GeneID:505646|LOC505646:XM_002693292:98_cdna Constitutive 0 NULL GeneID:505646 15 GENE LOC505646 NULL similar to olfactory receptor, family 52, subfamily A, member 1 (predicted) EMBV3_30696 TAAAGGTGATGCAGGAGAAAGAGGGGATCGTGGCCCCCCAGGAAGAGGTCCCAAAGGTTT Gene GeneID:282195|COL9A1:XM_002690002:16_cdna UTR3_Alt 2 NULL GeneID:282195 9 GENE COL9A1 NULL collagen, type IX, alpha 1 EMBV3_17113 CCTCGCTCTGTCAACATAAGAGGATTCATACTGGGGAAAAGCCCTACGGTTGCCACAAAT Gene GeneID:100140915|LOC100140915:XM_002695473:186_cdna Constitutive 0 NULL GeneID:100140915 18 GENE LOC100140915 NULL similar to Zinc finger protein 583 (Zinc finger protein L3-5) EMBV3_42995 ATGGATACCTATCACTCCTCCAAGACAGCGAGGAGATTGAGCAGAAATACGACTGTGGAG Variant GeneID:444990|EIF5A:NM_001003658:39_cdna 456^500 1 EMBV3_29108 GeneID:444990 19 GENE EIF5A MGC128860 eukaryotic translation initiation factor 5A EMBV3_26458 CTCTTTTCTCTGCCTCTGGGTCTCTGCTTCTCCGTGACTGGAATCTGTTGGACATGACTT Gene BVT0102_207591 + 0 NULL GK000008.2:63510842-63546360 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19587 GACAGGGCTGGTTTTGGCGAAGTGTGGGCATGAGAACACAAAAGGGTGCTTTGAAGACAC Gene GeneID:511553|LOC511553:XM_002697753:269_cdna Constitutive 3 NULL GeneID:511553 24 GENE LOC511553 NULL similar to Uncharacterized protein C18orf1 EMBV3_02652 CACATCAAGTTCAAGGAGTCTCTTGTTAATGGGAGCATGTAACGTCAAGGTTTAAAAACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27245 GCCTCAGCAGAGCGCTGGCGGAAAACTCAAGGACAGAGAACAGCATGAAGGAGAGAAAAA Gene GeneID:539451|NKX2-3:NM_001034676:204_cdna Constitutive 0 NULL GeneID:539451 26 GENE NKX2-3 MGC127415 NK2 transcription factor related, locus 3 (Drosophila) EMBV3_00047 TGAACTCGTGGGAAACACAGACTGACACACTCAGAGACATTGGAGACTTGCTCAAGGAGC Gene GeneID:785947|ULBP27:XM_002690329:5_cdna Constitutive 0 NULL GeneID:785947 9 GENE ULBP27 NULL UL16-binding protein 27 EMBV3_29977 CCAGGTCAGAGATGATTAAATGCCCAATTTCAGAAGGGGTGGGCAGGTTTAAGGAAAAGC Gene BVV0102_035711 + 0 NULL GK000025.2:38841169-38842835 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147331 TCONS_00147334 TCONS_00145541 TCONS_00145540 TCONS_00147329 TCONS_00147330 TCONS_00147335 TCONS_00147333 TCONS_00145544 TCONS_00147332 TCONS_00145543 2 XLOC_089345 XLOC_088861 Coding TCONS_00145543 XLOC_088861 Coding Coding RAC1 25:38826002-38842612 j TSS109045 2235 1 TCONS_00145543_1 194 6 0.865795652959239 0.00658718726019058 0.00564480169511952 0.0051500218348806 0.00294132873550334 0.00317397779019221 0.00318197568415748 0.00174475649965985 0.00453821038982855 0.00283160866836753 0.00114414704139658 5.64798833591587e-07 2.52551652047996e-05 0.000409580073720881 9.09846643749396e-05 0.000465097899812606 0.0564746136104899 0.0242293477573509 0.0492231314254523 0.0036358531819832 0.00619728729826773 1.76522105540743e-07 0.0211112592119496 0.0162661429796586 0.0195529947625165 0.00675024429467302 0.00658960090729051 0.00324711022848698 0.00476300093073423 0.00298328439379309 0.0100104150254181 NM_174163.2 RAC1 Bos taurus ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1), mRNA. 0.0 1352 100.00 0.334675615212528 NM_006908.4 RAC1 Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1), transcript variant 0.0 1732 78.19 0.90917225950783 TCONS_00145543_1 sp|P62998|RAC1_BOVIN RAC1_BOVIN Ras-related C3 botulinum toxin substrate 1; 6e-132 373 97.30 0.948453608247423 2 coding 0 0 0 0 -1.25873598155134 0.00247813389823887 0.0337147468651668 0.501234450399741 CAATGCTGTGTTTGAACATTGATGTTGACATTAGAAGTGAAAGAGCTGTGGGTAAGACTTGCCTCCTGATCAGTTACACTACCAATGCGTTTCCTGGAGAATATATCCCCACTGTCTTTGACAACTACTCTGCCAATGTCATGGTGGATGGAAAACCCGTGAATCTGGGCTTGTGGGACACAGCCGGACAAGAAGATTATGACCGATTACGCCCCCTGTCCTACCCGCAGACAGATGTATTCTTAATTTGCTTTTCTCTCGTGAGTCCTGCATCATTTGAAAATGTTCGTGCAAAGTGGTACCCTGAAGTGCGACACCATTGTCCCAACACACCCATCATCCTGGTGGGGACGAAACTTGACCTGAGGGACGATAAAGACACGATCGAGAAGCTGAAGGAGAAGAAGCTGACGCCCATCACCTACCCGCAGGGCTTGGCCATGGCCAAGGAGATCGGTGCCGTCAAATACCTGGAGTGCTCGGCGCTCACGCAGCGGGGCCTCAAGACAGTGTTTGATGAGGCGATCCGGGCTGTTCTCTGCCCACCCCCCGTCAAGAAGCGGAAGAGGAAGTGCCTGCTCTTGTGAACGTCGGCCCCCCACCGTCTGCCCCCAGGACCCTTTGTTTGCTTTGCTCAAACGGTGGAGCCTTCGCACTCAATGCCAAGTTTTTGTTACAGATTAGTTTTTCCATAAAACCGTTTTGAACCAATCAGTAATTTCTAGGTTTTGTTTGTTTAAAGTGTAAGAGTTCAAACTTTTCACATTCTATTAAAGTTCAGCCCTAAAATGACAAGCTTCCTTAAAGCCTTATTTTTCAAAGCCCCTATTCTTGCTCAGAGTTGCCAAAATACCCTGTGCACTAAGTTGCATTGTTGGGCTGAGAACACTAGGCACTACGCTGTGGAAAGGCCTTGGTCTGGAAGAGACTGTAGCTTTGGAGGTGGGAGGTGCAGAGCCTCGCTGGCGAGTTGCAGGCGAGAAGAGCGCGCACAGCCTCCTTGCTGAAACGCCGCAGTAACGAGTCACGGCAGCGGCCCACGTTCACTCCCTAACGCTGTACTGTACGTCAGAGCGCACGAGCCAGCAGCTCACTCTTTGGATCGGTCTTTTTGATTTTGTAGTGAGATTTTTAAAAACGAGTTCGTGTTTTAGCTTTTGTGAGATTCTGAACAGAACTCTTACCCCGTGCTCCCTGTGATGGAGTGTTCTGCTCTGTCTGTGGGTGCCCTGGGGTGGAGTGTGTGGAATACTTGTGATCAAAGAATGGAGACAGTATTTTGACAAAATGTGGAGATTAATTTACACTACACTGTACACGTAATCATTAAAACTATTAAAAGCATCACGGGTAAAAGTTTTAAAAGGTTAATTTCTGTCAAATGCGGTAGATGAAGAAAGGTCGGTATTATCAGTGAGTGTTTTCTTAAGCTTTTCCTTAAACCTGCCCACCCCTTCTGAAATTGGGCATTTAATCATCTCTGACCTGGTCATCCTCATAGTTGCTAACTTAGTAAGTGCTTTTCTTATAGAACTCATTCTTAATGAGCAATATGCCTCCTTGTATTATAAAATCTTTCTGAATATGCATTAGAAAATTTTTTTGTAGGTTAGTAAAAGTGCACTCCTGTTTTCATGTTGCTTTATTCAAAGCTAATAAGTGCTTTCCTTAGTTTTCTAGTAACTAGGTTATAAAAATCACGTGTTGCAGCTTTATGGTTTTTAAGATACTTCAGATATTCCTCAACTGTAAGCCTCAGCGTCACTGGCCAGATGACCGACACTGCCCCGTGAGTAGCGACACTGACCCCTCTGCCTCACTGCGTGCACACGCTTCCTGTCCTTGCCCTAACAATGTTCCTTGGGGTCTGAGGTTCCGCCAACCCTGTGCTCGTGCTAACGAAGTTCTGTACAACTTACCCACTGGCAAGAATACGAGCTTGGACCTTTCAACCACTAGAACAAAATTTTTTAAATTGACAGTTGCAGAATTGTGGAGTGTTTTTACATTGATCTTTTGCTAACGCGATTAGCAGTATGTTTTGCATGTATGACTTAATAAACCCTTGAATCATATGACTGGTAATACTGGAGTTCTTGAGAGCATGGGGAACCGCCCTCTGGTGTCTGCCTGCCTGCCTCACTGTAAAACCCTGGGTTGTTGGAGACGGTCGTGTTTTCATGCTGGGGGGACAGGGAGTGGTCCCTCCACGGGGAGAAGATGGAAGAGCCAGCA EMBV3_15058 ACAGCAAAGGGACTCAGCCATACTTACACATGTATCCATTCTCCTCCAAACTGCCCTCCC Gene GeneID:613879|MED30:NM_001079618:79_cdna Constitutive 2 NULL GeneID:613879 14 GENE MED30 THRAP6 Trap25 mediator complex subunit 30 EMBV3_08834 ACGTCCAGTCTAAGACCTTGGCAACTGCCTTTGGTGGTTCACGGGTCACCTGCCAATCAA Gene BVT0102_107751 + 0 NULL GK000013.2:58049013-58091935 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045738 1 XLOC_026513 Coding TCONS_00045738 XLOC_026513 NonCoding Coding GNAS 13:58018244-58058180 j TSS33315 2841 2 TCONS_00045738_1 64 3 0.928934518592713 2.50009716850016e-159 0 3.08973715119735e-151 6.23704893721534e-06 7.35671656650915e-06 2.88745297504573e-208 2.18895501894187e-05 2.12292677968701e-214 4.99889872285244e-196 2.83919140789597e-175 1.42083375573537e-135 7.48005342437732e-05 9.58568708950891e-301 0.000287726571306896 5.613826169816e-173 3.82935470792251e-171 1.6024513554445e-219 0.000212343869792677 3.27117556072488e-273 6.06315307847618e-05 4.98325423915439e-259 0.000726573695818903 0.000456700634277099 9.91715429470265e-05 4.6984679439187e-05 1.56906399121236e-164 0 7.23239125781551e-06 3.64973474782594e-06 2.26164079272426e-05 XR_227581.1 LOC101909083 PREDICTED: Bos taurus uncharacterized LOC101909083 (LOC101909083), 0.0 2385 100.00 0.464977120732137 NM_019690.2 Gnas Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus (Gnas), transcript variant 4, mRNA. 5e-29 134 68.61 0.0742696233720521 0 noncoding 0 0 0 0 0.00626479289185938 0.956705638360798 0.0208668594429394 0.663101406978759 AGGGTGAATATTTTTATCCGTTTTTGTTTTGGTGGATGACAGTTCCTTTGAGGTTTCTGTCGACAGAAGGTGTATATTTGTGTGGAAAGAGAGGACATATCCAGAGCGTGATCAGAACCTGGCTGATTTGGGAATGGGGGTGGAAGGGCAAACACAGCAACTTTTCTGCAGAGTCCGACAATGTCTGGGCCCCGCTGTCAGGAGAGGTAGCAGATATAGATAGACCATGAGAGTCTGGAGTGAAGATTTCGCTTCCTGTTCTTAATTCCGAGTGTTCTCTGCTGACTTTGAATTGCCCTGCCATCTCTCAGGTTCACGAAGTGAGGCCTTGTAGAAGGGGGGTGGGCGTGGGGTTTGGAGGTGTACCTGATGGGGTCAACAACAAATAATAGGGGGCACCTTCATCTGTCACACTTTTTCTTATTTTGAGTTGAGCAAACTGGGGGAAGGGGGGAATTTCAACAGTCCCGTTGAATGATTAACAGTGCCTTTCTATTTTCAAAGAAAAACTATAGGGACAATTTACTCAAGGCCTCTGACCCAACCAATCAATCACCCCACCCCCTAGGTATGTTAGCTGTGTTTCCATTTACAAATAGACTGTTTTCCTCTTTTTATCCTCCCAACTTTTATCCAAAGTTTTAATGACTGTTTCAAAGTGAAAGAAAATTAAAGAACGGAGAGAGTAGTAGTCGTGACTACTTGTGAATTTGGGTTGATTGGCAGGTGACCCGTGAACCACCAAAGGCAGTTGCCAAGGTCTTAGACTGGACGTCCTGGCTACTCTTGACTCACCTGGGTACCAGGTGGGCTGCTGGGACCAAACATTTATTGAATGAATGAATGAATTGTACCCAAGCAGACACCCGCTTGACTTCAAACGACTCAACCAAGGTCCCAGGAAAAGTGAGCCACCGCCCAGCCGTTGAGGACTGACTCGGTGTCACTGCCCTTAACCCACTGCGCTGGGTCTGCAGTATCCTTAAATGGGACAGTGCTGGGGTGGGGTGGGGGAAACACTTGAAAGTTTTTAAACAATTCTCAAACAAATTCGTGATCAATAAACTACTTTTCCATCTGTTCCAGAACACCCCCAGCCACCGCGGCCCGCGGGCCCAGCCACGGATAACTGGGACACCCTGGCCCACCACCTCGCCAACCCGGGAGGACTCCAAGGGCGCCGACCCCGTGACCTGCCCACCAGCGCTCGGCTCTCGCGTCGCCGGCTTCACCTTGCGATGATGCTCGTTCCGCGCTCATATCACACCGCACATCGCCTATCACGCGCCGCGATTAATTAGTGCCGACACCTACCTCCGCGGGTGCTGGAGAATCTGGTAAAAGCACCATTGTGAAGCAAATGAGGATCCTGCATGTTAATGGGTTTAATGGAGAACTATATAACCCCTAGATGATGGCTTCAATTTCTCATCTTCCCGGCTATGTCCTATCACACTTTGCATGCTGGAATTGCCCGTCTTAGGAACTTCTAATAAGAATACTATTCTGTTGTGGGGGGGTGGGGGGATGGGGCCCCAACACCTAACCTCTAAAGATAACTGAAAAAAAAAAAAAATTTAAAAAACAAACAAAAAGCAACAAAAAAAGTAACCCCTAATTGACAAATATGTAGTGTATCAACCACCCAAAGCATCTACATAAACAGTGATTGACAGCTTACTGTACCAAAAGTTGGCATTTGAGAGCTATGACCCTTCTCTATTGAACCCACTTCCCTATTGAACCACCTCCTGTATACTTCCTAGATGCTATGCTACATCCCTGACTGAATCCTACTAATACCTACTAACGGCCTGCTCTTCTATCTGTGACTCTGTTCTACAAGTAAAACTTAAGTATTAGGCCTGCTCTTCTATCTGTGACTCTGTTCTACAAGTAAAACTTAAGTATTAGGCCTGCTCTTCTATCTGTGACTCTGTTCTACAAGTAAAACTTAAGTATTAACAAATGTGATAAATAAAAATTCTCTGCATGTCTCAGCAATCCCTGTATCTTGCGTCTGTCTTCTGTCTTTCTTCTTTCGTCTGTCTGCCCACCAAAAAAAAAAAAGCATAAAGATAAAAGATATAGAAGTCAGTATACAACATAGCCTTCCCCTAACACACGGGGGAGGGGGTGACCATCTCTTAAAATTTGAACCCAGCATATAAAGCAGCCCTGATCTCAGGCTTTATACATGTTGGAGGGGAGGGGCAGTTACAAAATCCAAACGGTTCTTCCAGCCCCCACTTTTCATCCATCAGAATTCTGTATGTAGTTGATATACATTTTGGCTTTCATTACGTCAAAGACATACGAAGAACTTTATCAGAGAATGTCACAATCAATGTTAAATTCATTAAGCGATAGTAAAAATTACAGTAAACCTGCCAACCCCCAGTATAATATCTCCATCTACATAGTAATTGCTTCAATGGAGGAATTTTTGTTTTAGTATTACACACCCGAATTAGATTTCAGATTTCTATTTTAGCTGTTTTATACTTGATATACTCCCACACCTATTCACATACGTAGATGAATACTGAGCACATTCTCAGAATATCCGTATTTAAGACTGGAAGTTTTCCAATTACCATACTACTACTTAGACCAAAATATCAAACTGAATGAAAGAACCAGGTTCCTGGAAATAACTTTTCTCTTGTTTTGGGCTCATTTGGGCATTAATACCCAGACGTAAATAATTTTAACTATTGTGGGACCTTAAAACCAAAGCTCCAAGGCTCTCATTACCATGGAAATGGAGCTTCTTTCTAATGAATGGGAATGGGACTGTCCTGTGGGGTTTTAACTTTGAATTTCTGTGTGCAACTTGGG EMBV3_42971 GGCCATTATCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGGTATGTAGTGAC Gene GeneID:100336935|LOC100336935:XM_002687372:81_cdna Constitutive 0 NULL GeneID:100336935 5 GENE LOC100336935 NULL PDZ domain containing RING finger 4-like EMBV3_42695 ATGACGGGCCAGTGTGATCACCAGCTCCAGACCTCAAAGAAAGTGAAGCTGTCAGGCAAA Gene BVV0102_327861 + 1 EMBV3_42818 GK000008.2:65321340-65339463 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232291 1 XLOC_141777 NonCoding TCONS_00232291 XLOC_141777 NonCoding NonCoding - 8:65330963-65332309 - TSS173795 1346 1 TCONS_00232291_1 108 1 0 0 0 0 6.16950551957197e-06 0 0 0 0 0 0 0 0 8.10051652162875e-05 0 0.000121196765223745 0 0 0 0 0 0 6.61576154131387e-05 0 0 0 0 0 0 1.08200771937827e-05 0 XR_235611.1 LOC101908166 PREDICTED: Bos taurus uncharacterized LOC101908166 (LOC101908166), 1e-14 86.0 96.15 0.037890044576523 XM_003946131.1 LOC101055654 PREDICTED: Mus musculus uncharacterized LOC101055654 (LOC101055654), mRNA. 0.0 704 86.72 0.444279346210996 0 noncoding 0 0 0 0 0.0299387611351517 0.840481173859999 0.00282582243609694 0.952100754628948 CTGAAAACATTCACTTGGTTTGAGGTCATCTGAAGAAGTGCATATGATTAGGGCCCTAAGTTTAAGCAAGGGGTGGTGTCCCAGTTTGTAAGAAAGCCTAGTCTCTGCTTCCAAGACTTTCCATTTGAGTGCAAAAATGTTGCCACTTATCAGCGACCACTGGAACCTCTCCAACAGTCAGTTCGGCTTCCTACCCAGAGGAGCACTGAGACAGCTGATTGGTTCAGAGCAATCAGACAACAGGCCTCAGCCTCAAAGCGGTCAAGGAACAAAGATTGGTGACCAGATATTCAGGGGAAAAAAGCATGGAAAAGGCAGGAGAGGGGGAAGGGGACGAGGAGAGAACATAATTAACCAACGTAAGCGTCCAGAAAGTCACATCCACTCAACATGTCAAAGAGAAAAATGCGTTACCTGGAGACATTCTGCTAGGGGTGGATTTTTTTTTTTTAATTTAAGATAAATAAGAATATCGAAACTGTCACGGAGGAAATCCAAGTCATATGAACAAACTTAACTAACAAGTTTTACATATTAACATTTACAAAACGTAGTTTACTCAACAAATTCACTGAAAGATGTCCTATTTCCTAAAAACTGTACCTAACAGTTGTCCTTTTGAGTGATTCCAGTCCTGCACGCGATTTCAAATTGAAGGGGGAATAGGTGGGGTGCAGAATACATGAAATTTTTACAGCATGGAAATAAAAAGTATTTTTAAACCTTCCTGGGGTGAAAAGTTAGGCAAAAGGTAATACGTGGAAACTGTCAAGTCCTTCTCTACACACCCACCCACCAGATACCATCGCAGCCGGCTAGGGGAGTCTCCCTCTTTTTGCCTGACAGCTTCACTTTCTTTGAGGTCTGGAGCTGGTGATCACACTGGCCCGTCATGGTATTTTCAGTTAACAAAGCAGTTACTCAACAGGGGAAAAAGCCACAAAGGAGCCGAGCAGCTGCTGCTGCACCCGTGATGCAAGTGCAGGATGAGCCCCGGGCCGCCACCGCCGCCTCGGCTCCTCCGTGACGTCCGGGAGGGGTATCCCCGGCCCTCAGGAAGTGGTGGCCGCGGGCGGCTCCGCCCCCAGGCAACTCTGGGCTGGCGAGGACGCCGGGTGGCGGGAAGGCCGGGCCCGTGACGGACGGGGATCACCGGCCGAAAGCCGAGCACGCCCCGCGGGCCGCGCGCCCCGGGCCCTCCCTCGAGTCACCCTTCATGGCGGTCTCCGCGCCCTGACTCGCCCTCCGCTCCCGTCACAGCCCGCGCGCCCCACTCTCTCCCACAGCTCACACCCACTCACCCCGACCCCCTGCGCCGAGCCTGGCCCAGCGTCGCCGGTCACCAG TCONS_00225675 TCONS_00225676 . 5' 7155 TCONS_00225675 TCONS_00225676 . 5' 7155 EMBV3_32397 TTCAACCAAATTCTCCTAAAGCATCCTCGCCATCTGCCTCTTGAATAGCCATTGCCGCCC Gene BVV0102_264873 + 0 NULL GK000011.2:8946623-9121672 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01576 CGTCAGACCCCCAAGAAGAGAACAGAAATACAGGAGTGGTATTTGGGGCCATTTTAGGTG Gene GeneID:337919|MUC15:NM_176631:14_cdna UTR3_Alt 3 NULL GeneID:337919 15 GENE MUC15 NULL mucin 15, cell surface associated EMBV3_24065 CCCATGGCAGCTGGATCCTGGGTTGCAGGTATTGTTGACTCAGTGGTGCAGACATCTCTT Gene GeneID:789782|LOC789782:XM_002689896:60_cdna Constitutive 0 NULL GeneID:789782 8 GENE LOC789782 NULL similar to Olfactory receptor 13C8 EMBV3_17845 AAAGTGTTCAAGATGTTTTCAGGTTTACCAGTGACCACCATGGCTGTTGCCACCGTGGGC Gene GeneID:506781|CNKSR3:XM_002690349:5_cdna UTR3_Alt 2 NULL GeneID:506781 9 GENE CNKSR3 NULL CNKSR family member 3 EMBV3_16598 AAGGACTGTTTGAAGTAAATCCCTGGAAACTAACTCGGGACGGGAGGAAGATTTACTTTA Variant GeneID:535740|APMAP:NM_001035413:44_cdna 567^641 1 EMBV3_05489 GeneID:535740 13 GENE APMAP C13H20ORF3 MGC127374 chromosome 20 open reading frame 3 ortholog EMBV3_35877 ATTCAATGTGACTACTGTTGACATGACCAGGTATCCTCACTTGAGTCCCAGGAACAAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18263 GACCTGGTCCGAGCCCACCCGCTTCTGGAGGCTCCGTCTCCATTCTGGGTTCTGATGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19097 TCCCTTGCTGTATAAGGTCTCCATGTCCCATCATGTCTGTTTGGTGCTCTCTTTGGCTGC Gene GeneID:617119|LOC617119:XM_002699190:53_cdna Constitutive 0 NULL GeneID:617119 29 GENE LOC617119 NULL similar to olfactory receptor, family 8, subfamily B, member 3 EMBV3_12361 AGCAACCCGGACCTCTCTGGAGACGAGAATGTTACCTTATATGAATGTCATTCACAAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13591 TGGACCGCTATGTTGCCATTCAGAACCCCATCCATCACAGCCGATTCAACTCCAGAACTA Gene GeneID:407230|HTR2A:NM_001001157:32_cdna UTR3_Alt 2 NULL GeneID:407230 12 GENE HTR2A 5HT2A 5HTR2A 5-hydroxytryptamine (serotonin) receptor 2A EMBV3_22292 AAGGACTTTCTGCTCACAGCCCGCCGCAAGGACGCCAAGTCCGTCAAGATCAAGAAAAAT Gene GeneID:615300|RPL38:NM_001113309:32_cdna Constitutive 0 NULL GeneID:615300 19 GENE RPL38 MGC133564 ribosomal protein L38 EMBV3_19691 AGAACTGGCCACAAACTGGACACCTGAGAACAGCTGTGAGTCACTCTTCACTCCCACTTT Gene BVV0102_315130 + 0 NULL GK000017.2:4495905-4669853 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00394 TTTCCTGGACAAGATTGCTGACAAGCTGCTGAAGTGGTCTCTCCAAGTCCCAGCTGAGCC Gene GeneID:516318|PER1:XM_002695858:326_cdna Constitutive 0 NULL GeneID:516318 19 GENE PER1 NULL period homolog 1 (Drosophila) EMBV3_03844 AGGAAGCAGGTGGTAGACTTAGGAGAGACATGGAGTGGACGGACCTCCTTAGAAGACACT Gene BVT0101_031289 + 1 EMBV3_03043 GK000013.2:68097052-68119516 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35575 TCTTTGGTAGAAAGCAGCCAGACCTTGATTAGGCAGATGAAGCCATCTCGTGAGACAGTC Gene BVT0102_057492 + 0 NULL GK000002.2:92057924-92066962 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105852 TCONS_00103005 TCONS_00103000 TCONS_00103002 TCONS_00102996 TCONS_00105853 TCONS_00102992 TCONS_00102993 TCONS_00102995 TCONS_00102999 TCONS_00105855 TCONS_00105857 TCONS_00103003 TCONS_00102994 TCONS_00105856 TCONS_00105854 2 XLOC_062657 XLOC_061988 Coding TCONS_00105853 XLOC_062657 Coding Coding LOC523153 2:92062553-92166448 j TSS78009 3378 1 TCONS_00105853_4 659 15 0.967630469517008 0.000503054934271581 0.000498350905820883 0.000435392685728316 0.000641156357944739 0.00113566009962141 0.000262339415988954 0.000283389818912105 0.000979636226739483 0.00152703452164603 0.00131337476837848 3.27463389043991e-06 2.5088063774619e-11 0.000503438507852556 0.000242756449729945 0.00048584817187921 0.00087037547935562 3.68267051037907e-241 0.000120902903243807 0.00118469984855393 0.000672943953649344 8.61639073474064e-160 0.000568857221561124 3.64387142723596e-100 9.24550099574572e-229 0.00253529357686158 0.00304497137791522 0.00085390291221789 5.06531634923426e-05 0.000123174479969923 0.000294846532342332 XM_003581853.2 RAPH1 PREDICTED: Bos taurus Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 (RAPH1), mRNA. 0.0 3204 100.00 0.525458851391356 NM_213589.2 RAPH1 Homo sapiens Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 (RAPH1), transcript variant 1, mRNA. 0.0 2587 92.29 0.525754884547069 TCONS_00105853_4 sp|Q70E73|RAPH1_HUMAN RAPH1_HUMAN Ras-associated and pleckstrin homology domains-containing protein 1; 0.0 1144 97.13 0.896813353566009 2 coding 0 0 1 0 -0.219348194642834 0.20915958101902 0.0232050880904956 0.633582951468785 GTGTAGATGGGGATGGGGGCATTCCGAGTGGGGGTGGTGTTCTCCTTTGAGAGAGGCATTGAGGAGGAAGAGCAGTGGGGGAAGGGCAAGATTAGAGACGCTTAGAGGTGTTTTAGCTCTCGTTCGTCTGACCTTCAAAGATTGTCTGTTATTTTGCTTTCTGTGTTGTGAATTTCCCAGAAAACAGACCTAGCCTATTCAGATGGAGCAGCTATCGGATGAAGAAATTGACCATGGTGCTGAAGAAGACAGTGACAAGGAAGATCAGGACCTAGACAAAATGTTTGGAGCCTGGCTAGGGGAGCTAGACAAACTCACTCAGAGTTTGGATTCTGACAAGCCCACGGAACCAATAAAAAGATCTCCTCTTCGCCAGGAAACAAACATGGCCAATTTTTCTTATCGCTTCTCCATATACAACTTGAATGAAGCTCTGAATCAGGGAGAAACTGTGGATCTGGATGCCCTAATGGCCGATCTTTGCTCAATAGAGCAGGAGCTCAGCAGTATCGGTGCTGGAAATACTAAGCGTCAAATCACAGAAACAAAGGCCACTCAGAAGTTACCCACTAGCCGACATACATCAAAGCATGGCACCTTGAAAGGACTGTCTTCTTCGTCCAATAGGATAACTAAACCGTCTCATGCCAACTACTCCCTGGATGACATCACTGCACAGCTAGAACAGGCCTCCTTGAGCATGGATGAGGCTGCTCAGCAGTCTGTGCTAGAAGATACAAAGCCCTTAGTAACTAATCAGCACAGGAGAACAGCGTCAGCGGGCACAGTGAGTGATGCTGAGGTACGCTCTATTAGTAACTCCTCTCGTTCAAGCATCACTTCTGCAACCTCCAGCATGGACTCTTTGGATATTGATAAAGTAGCACGCCCTCAAGAACTGGATTTGACACATCAGGGGCAGCCAATTACCGAGGAAGAACAGGCAGCAAAATTGAAAGCTGAGAAGATCAGAGTTGCCCTAGAGAAAATTAAAGAGGCACAAGTGAAAAAGCTGGTGATTAGAGTCCACATGTCTGACGATAGTTCTAAAACAATGATGGTGGATGAGAGGCAGACAGTGAGACAAGTGCTGGATAACCTGATGGACAAATCCCACTGCGGTTATAGTTTAGACTGGTCTCTGGTGGAAACCATTTCTGAGTTACAGATGGAGAGAATCTTTGAAGATCATGAAAACTTGGTTGAAAATCTTCTTAATTGGACAAGAGATAGCCAAAACAAGCTTATATTTATGGAGCGTATAGAAAAATACGCACTTTTCAAAAATCCACAGAATTACCTTCTGGGGAAAAAGGAAACAGCTGAGATGGCAGATAGAAACAAAGAAGTGCTGTTGGAGGAGTGTTTTTGTGGAAGTTCTGTAACTGTACCAGAAATTGAGGGAGTCCTTTGGTTGAAAGATGATGGCAAGAAGTCCTGGAAAAAACGTTATTTCCTCTTGCGAGCATCTGGTATCTACTATGTCCCTAAAGGAAAAGCAAAGGTCTCTCGGGACCTGGTCTGCTTTCTTCAGCTGGATCATGTAAACGTCTACTATGGACAGGACTATCGGAACAAGTACAAAGCTCCTACAGACTATTGTCTGGTGCTCAAGCATCCGCAGATCCAGAAGAAATCTCAGTACATCAAATACCTTTGCTGTGATGACATGAGGACCCTGCACCAGTGGGTCAATGGTATCCGCATCGCAAAATATGGGAAGCAGCTCTACATGAACTATCAGGAAGCTCTGAAGAGGACAGAATCGGCTTATGATTGGACTTCCTTATCCAGCTCCAGCATTAAATCAGGATCTAGTTCTTCCAGCATCCCAGAATCTCAGTCCAATCACTCCAATCAGTCTGACAGTGGAGTGTCTGACACCCAGCCGGCAGGACACGTCCGTTCCCAGAGCATGGTGAGCTCCATCTTCTCCGAGGCCTGGAAGCGAGGCACGCAGCTGGAAGAGTCCAGCAAGATTGCTGATTCTTCAGAAGTTACAGGAAACAGTTTTCATCAGAACATCTCAGAGGAATGTCCCACAGACCGTCCCACAGTCCTCGGACATCAAGGTGCTCCTGCCCACTGCCGGCATAGCCTGCTAAGGAAGGGCTGCGAACTATTTCGGCAGTCCCATCTCCATTGCCTTGAACTCTTGGAGGAACAACATAAAAAAATCTAACAAGCAAACTTTGAGGTGCTAATGAAAGAAGGAAGGTGTTTCTAGTTTGTGCAGAAACAGAAAAAGTGACTGTCTCACGAGATGGCTTCATCTGCCTAATCAAGGTCTGGCTGCTTTCTACCAAAGATATTTAGAGTAGTGAGTCAGGTCAGGGTGATGGTGAATACTACATGTTTAAAAGATGGCCAAGTTCAGAATGAACGTAGAACATGGATGGCTACTGATACCAAGCGCATAAGTGAAGCCTCAGCCTCTTCTCAAGCAGAAGTGCTTGTGGCACTTGAACAAACCCACATTCTGCGAACTGTCCGTTGTTTGTCAAGTTTATTGTAACCCAATACCAAAAACTGCCATTTTTTCATGATTACCACCTCCTATATCTCTGTACTTGTAAATAATTTCTCCTAGGGAAAAAAAAAAGCATTAACTGGAATGTTTCAAATGACTTCACTTAATTTTATTGTCAGCCACTAGTGAACTCCTTTTATAGAAATGTACATTTAGAATATCAGCTTGTGTAAATGTCATAAAAGCATTGTTTACTGTTTTAAAGAAAAATTGCACATTTAACTGAGATTGCTCCCTCTCTTCCCATTTCTTAAAAAAAAAAAAATGGAGTAAAGGCTCACGGATATACAGTGTAGGAATATACCTTTTTAAAGCATGAAAAAGGCAAAGGGAACTGCATTAAAAGTACAGGATAGAGGACATTATTCAGATGATTATGCACAGCTCGGTAAAGATGAAGTTACAGTTTTTCTTTCAGCTTTGTTGCTATTATTTTATTCTACTTAAAATGTACACTCATTTCATTATGTGCCTTGCTCCCTGATTGTGCTAAACCTATATATAGATATATATATATGAGAGATATATTCAGTACTACTGATGTTTTTGTTCTACTGCTGGATTAAGTTATTTTCCAAGTTACTTTATTCTTGCCAAGTTACTGTCAGTAAACTATTGTAATGGCTTAGGACAGTAGTCATGCAGTCAGTGTAATTTACATGTTACCATTATGTCAGCTTATCCAGTCCTTAATAAAAAGAATACATAGATTCATTTAAACATCTGAACTGTACTGGACTGTTTGTGGATCGGCACTGTAAGAACCTGGTTTTGCTATTTATGTTGAGGTACCCAAGACAGATTGCAAGATGCACATAAAGCGTGAAGGTAAACTATAATTTGGTGTG EMBV3_26149 TGGCATCCGAGGACCTTTATCCAGAATTGGGCAGGGGCCAGTGGTCGCCCAGGACAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29929 CTGTGTCAGGCACTGGGCTGGAAACTAACAGGTTGATACTGAAGCATAAGACACCATCTG Gene BVT0102_300646 + 1 EMBV3_19908 GK000003.2:14715263-14744311 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15970 CCTCGGATTGAGGATGGGAATAATTTTGGAGTGGCTGTCCAGGAGAAGGTGTTTGAGCTG Gene GeneID:510041|PSME1:NM_001024509:122_cdna Constitutive 0 NULL GeneID:510041 10 GENE PSME1 MGC128361 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) EMBV3_18687 GGCCTCGCTCGCATGGAAAACCAGGCCTTTGACCCTGAGAAAGGGAACTTCAACACATTA Gene GeneID:617287|TRAM2:XM_002697284:66_cdna Constitutive 1 NULL GeneID:617287 23 GENE TRAM2 NULL translocation associated membrane protein 2 EMBV3_01452 ACAGGGCAGAGGCCCTAAAGTGGGAAAGTGTGGGAAGCTTCCAGCAGGGCTGTGGTCACT Gene BVV0102_306169 + 0 NULL GK000017.2:74912978-74924012 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02046 AGGAACCTGTCGGTGACACCAAGAAAAAAATTTATTTACGTGAATCAGTCCTTTGCCCCC Variant GeneID:767903|ATG12:NM_001076982:63_cdna 133^269 1 EMBV3_07625 GeneID:767903 10 GENE ATG12 MGC127276 ATG12 autophagy related 12 homolog (S. cerevisiae) EMBV3_33072 CAAGTGTAAAAGTAGGTAATTAAGTATACTGACAGCACCAAATAAGATATAGGAAGCTGC Gene GeneID:540195|RNF19A:XM_002692784:57_cdna Constitutive 2 NULL GeneID:540195 14 GENE RNF19A NULL ring finger protein 19A EMBV3_34140 ATCATGAAAAACAGAAGCCCTGTCCTGCAACCACTATGTAAAGCTGTATGGAGATTCCAC Gene BVT0102_276431 + 1 EMBV3_20372 GK000026.2:18787377-18858543 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151682 TCONS_00151681 TCONS_00151683 1 XLOC_092162 NonCoding TCONS_00151681 XLOC_092162 NonCoding NonCoding - 26:18850267-18858289 - TSS113324 2508 5 TCONS_00151681_5 66 0.621212121212121 3 0.687694801146989 8.70164245516677e-08 0.000382480961405288 2.78073344154164e-08 2.35709466088014e-10 0.000481212828694365 0.00148607785227034 2.9916730623177e-05 1.47839083897805e-09 0.00111835926451066 8.88593803977143e-05 1.82381652492201e-06 1.14524305191291e-97 8.791591562423e-06 3.18814656859622e-05 1.29262442553871e-207 0.000126351607927159 0 0 9.63193615744958e-08 3.0781969051563e-05 0.00114338897373366 0 0 0 0.00100910874915794 0.000216850176918086 6.42637769529572e-17 1.54657400979938e-08 3.86786431783576e-06 0 XR_229924.1 LOC101905123 PREDICTED: Bos taurus uncharacterized LOC101905123 (LOC101905123), 0.0 1326 100.00 0.292663476874003 NR_038877.1 LOC286189 Homo sapiens uncharacterized LOC286189 (LOC286189), non-coding RNA. 8e-45 187 76.75 0.105661881977671 0 noncoding 0 0 0 0 -1.04280238687904 0.104924074262615 0.020422496755842 0.669718788152622 CACTACCGAGGCCTCCCAGGGCTTCCAGACTAGGAGGAAAGAGAGGTAGGACCGTTCTGGGACAAGACATTCCAGCTTGCCAAGGCTGACGGTCCTAGACTCGTTCGCGGGCCCCTAGGTTGGGAAGACAAAGGATTCTAAGAGTGGCCAGTGAAGTAGAAGGAGACCTGAAGGAGAGTGGTATCCTGGAACCAAGAAGTGGAGTGGGAGGCAAGTTTCCGTAAGAATTCACAGCTACCCCAAGAGAAACTGCCGATACTGGGATTCTTAGCTGCAGTGCATTCCTGTCTTGATGACAGCCACCAAGCTGGAAGCCCGGCAGAATTCCCAAAGAACCCCTGTTCTGAGAATGGTTCCAAAGGCCCTCTGCAGGAGCAATTATCAAAGGACTGACTGCAGGGTCTCACCTCCAAACTGGCAACAAATTCACCAATTACTTCCAACCATAGCCAACTGAGGGGAAGACTGCAAGGCTTCTAAGTGATGGAAGTTCTTTAGAGAAGTAAATAGGCAGGAGCATAAAGGGTAATGGGTGCTTATAAAGCATCATTAATCATGAGAGCCAAAAGGAGTTCAATCCAATTTCACTGGCAGAAACCTTTGTTCAAAAGAAACCTTGCATAAAAGTCAGAGACATAAAACAAATCAGAGAAAGTGGATTTGCATGAATGGGGGGAAGACTTACCTACTTTCCCACCCTCTCACTCCCTACAAAAACCCCCAACACACCCCTCTCCAGACCTCCCAGGACTCAGTAGAATATGGGGTCTATTTTTAATCGTGAAAGTAACACATGCCTATGATTTTAAAAATCCAAACATACAGCTGCTAAGTCGCTTCAGTCGTGTCCAACTCTGTGCAACCCCATAGATGGCAGGCTACCAGGCTCCCACATCCCTGCGATTCTCCAGACAAGAACACTGGAGTAGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCTTCGCAACCCCATGGACTGCAGCCCACCAGGCTTCTCCGTCCATGGGATTTTCCAAACATACAGAAAGGCATATGATAAAAAGCAAGAGTCCCCTATCTACTGTATCCTACATGTTCCTACCTTCAAGTCATTTCTCCCCTGGAAGAAATGACTTTTCACTCTTTAGCTGTTTCTGCTTTGAATTCTGATTTTTCAGAAGTTTTCTTTACATTGCTAAATGATATGCCTGTAGTTCTATTTCTTGTTTTATTAACTTTAGAAACCTTTTTCCTGTTTTCTGCTGTGGCAACAGAGAACTTAACTCACCCTGCCACCCTCAAATACCAATATAATTACAGCACTATTTGAATTTAACTTTTATTTTTATCAAACTAATACACATGTAGTTAGTTTAAAATTCCAGCCAGGGACAAGGGTTTATCATGAAAAACAGAAGCCCTGTCCTGCAACCACTATGTAAAGCTGTATGGAGATTCCACAAAAGACTAAAAATAGAACTACTGTATAATTCAGCAATCACACTCCTGGGTATACATCTGAAGAAAACAAAACATTAATTTGAAAGTATACATGCACTCCAATGTTCATAGCAGCATTATTTAGAAGATCCAAGATACAGAACCAACCTAAGTGCCCATCAACAGATGAATGGATAAAAAAGATGTGGCTTATATACACAATGAAATAGGAATACTGCTCAGCCATAAAAAAGAAAGGAAGTTTTGCCATAGCTAGAACTAGAGGGTACTGCTGCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGCGAACCCATAGACGGCAGCCTACCAGCCTCCCCCGTCCCTGGGATTCTCCAGACAAGAACACTGGAGTGGGCTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACCCTCAGCGACCCCATGGACTTCAGCCTTCCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCTGAGAGGGTACTATGCTTAGTGAAATAAGTCAGACAGAGAAAGACAAATACTGTGTGTTATCATCTAAAAACTAAAATAAATGACTGAATATAACAAAACAGAAATCAACTTACAGATATAGAGAACAAACCAGTGGTTATCAATGGGGAGAGGAAAGGGGTAAGGGCATAATAAACAGAGAGGATTAAGAGTTTTTCTATACAAACTACCACATATAAAATAAGAAAGCTACAAGGATATACTGTATAGCACAAGGAAGGAATATAGTCGATATTTTATAAGAAATGTAAGTGGAGTGTAATCTATACAGTTTTTGAATCACTGTTGTTCACCTGAAACTATATTATTAATCAACTAGACCTCAATTAAAAAAGTTGTCTTCTTGTAAAAAAATGAAATAAATAAGCTACAAGGATATATTGTACAACACAAGGAATTAGCCAATATTTCATAAAAATTTTAAATGGGGTATAATCTAAAATTTTTTGAGT TCONS_00150328 r 5' 5387 TCONS_00150328 r 3' 219 EMBV3_06952 CAGAAATTTCAGATGGCCAGGAAGAAAGGATCTACTACGTTTTAGCCTTATGAAAGAATC Gene GeneID:528398|AHI1:XM_002690265:58_cdna Constitutive 1 NULL GeneID:528398 9 GENE AHI1 NULL Abelson helper integration site 1 EMBV3_02754 TCTCCGATGTCTGGGGGGAAAACATCCTCTTAAAATGGGTCCTTGTGCTTGCCTTCTGGG Gene GeneID:505228|THRAP3:XM_002686473:527_cdna UTR3_Alt 3 NULL GeneID:505228 3 GENE THRAP3 NULL thyroid hormone receptor associated protein 3 EMBV3_16279 TCATGAGGCAATACCGGCATCACTGAGCGCAAGAGTCACAGAGGTGACGAAGCCAGATGA Gene GeneID:513432|PAK7:XM_002692030:67_cdna Constitutive 0 NULL GeneID:513432 13 GENE PAK7 NULL p21 protein (Cdc42/Rac)-activated kinase 7 EMBV3_29884 CTCCTAGAGGTGAAACCCTCCGAGCTCAGCAAAGAAGTTGGAATATCTAAAGAGGAAGCC Gene GeneID:540886|RAD51C:XM_002695600:165_cdna Constitutive 0 NULL GeneID:540886 19 GENE RAD51C NULL RAD51 homolog C (S. cerevisiae) EMBV3_07733 AAACAGGTGATCTTCAGGACGATGAAGGAACTCCAAGAGGTGGAGAAGCTCAAGCTGAGG Gene GeneID:782076|LOC782076:XM_002687912:76_cdna Constitutive 0 NULL GeneID:782076 5 GENE LOC782076 NULL hypothetical protein LOC782076 EMBV3_29575 GTGTTGGGCTACACATCCTGTCGTCCTGAAGAACTGGCCTACTGAACAGTCATATTTGAA Gene GeneID:529052|LOC529052:XM_002690233:31_cdna Constitutive 0 NULL GeneID:529052 9 GENE LOC529052 NULL similar to F55A4.8a EMBV3_27007 ACATCCGGCGGGAGTTCATCGAGAAATATGACAAGTCTCTCCACCAAGCCATTGAGGGTG Gene GeneID:327685|ANXA6:NM_001103224:31_cdna Constitutive 0 NULL GeneID:327685 7 GENE ANXA6 MGC166185 annexin A6 EMBV3_16096 CAGGCCTCGACTGGTGGAGTCGCGGGGAAGGTGCTGAGGCCAAGACTGTTCTGCCCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13875 ATAGGAGTGTCCTTTACTCTAGAACAGGCTTCTGCCAACCACTTCTGGGGGTCAGGAAGA Gene GeneID:529775|MGC155141:NM_001081528:35_cdna Constitutive 0 NULL GeneID:529775 21 GENE MGC155141 NULL hypothetical LOC529775 EMBV3_12475 CCACAACCTGGAGCTGTACGAGAATTGGCTGCTGTCAGGGAAACAGGGAGACATCTTTCT Gene GeneID:100336880|LOC100336880:XM_002699395:406_cdna Constitutive 0 NULL GeneID:100336880 29 GENE LOC100336880 NULL F-box and leucine-rich repeat protein 11-like EMBV3_02459 AACCCGTCCAGTCAGACAGGGGTCCACACTTGTTTCAATGCTCTGCTGTCACCATCTTTA Gene BVV0102_185802 + 0 NULL GK000006.2:116105091-116193193 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30336 CTTTCTTGACATCACCTTGCCAGCTCTGGAGAGCATCTGAATTTATTGTAGCAGCTGATG Gene GeneID:532333|SDPR:XM_002685467:40_cdna Constitutive 0 NULL GeneID:532333 2 GENE SDPR NULL serum deprivation response EMBV3_31234 GTACAGGCCCGTGAAGGTCAGGGGGCACTTTGACTTCAAGAGCACAGTCCCTGGAGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08349 TACACTGAAAACTGGACGTTATAACATTAAATAACTTCATTCAGAGGACCAAGCAGCGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43391 CGAGAAGATATTTACAGCTCTGCAAAGAAGACTACAAAGGCATTTCTTCCTGAGATGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24530 TTCACAATAATAGAACAAAAATGCGTACTGAGCCAGGGGTCCTGCAGGGCTTGGGGGCTT Gene GeneID:509041|NAPG:NM_001046022:71_cdna UTR3_Alt 2 NULL GeneID:509041 24 GENE NAPG MGC137662 N-ethylmaleimide-sensitive factor attachment protein, gamma EMBV3_04203 AGTTTGCTGCATCTGACTTCCATTTTGTAAATAAGCCTTTGTCCACCTCCCCCCCACCCC Gene GeneID:614872|RPL22L1:NM_001098131:37_cdna Constitutive 0 NULL GeneID:614872 1 GENE RPL22L1 NULL ribosomal protein L22-like 1 EMBV3_25289 CTGGGGTAGAAACACCCGCGTTCAACACACACTTCTGTTACATGGCACGGCATTTCAGGA Gene GeneID:524648|HOOK3:XM_002698711:127_cdna Constitutive 0 NULL GeneID:524648 27 GENE HOOK3 NULL hook homolog 3 (Drosophila) EMBV3_40294 TCTGGTGCCACGCAGGTGTTTACAGCTTGTGGATAGTAATCTCATACCTTAACCATACAC Gene GeneID:536604|DPP8:XM_002690470:381_cdna Constitutive 0 NULL GeneID:536604 10 GENE DPP8 NULL dipeptidyl-peptidase 8 EMBV3_10673 GCGGCCCAGATGCTGCAGTCCAAGAAGAACGTCCATCTCTTCATTACCGGAGAAAGATGA Gene GeneID:510385|LOC510385:NM_001105352:54_cdna Constitutive 0 NULL GeneID:510385 16 GENE LOC510385 NULL hypothetical LOC510385 EMBV3_26511 ACCCATGCTGCAGACTGTGGCCAAGAACAAGGACACTGCACCTTCCTTGTGGGAGATTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07771 TGAGCAATTAGAAACCCTTCACGAAGCACTGAAACTGCTGCCGCCTGCTCACTGCGAAAC Gene GeneID:508266|CHN1:NM_001075349:214_cdna UTR3_Alt 2 NULL GeneID:508266 2 GENE CHN1 MGC139749 chimerin (chimaerin) 1 EMBV3_02004 GTGTTCAGTGAGTCTGGGGAATGAGATCCGGAATACACGAGAGAGCGTGATTTCTACACT Gene GeneID:782799|LOC782799:XR_083709:228_cdna Constitutive 0 NULL GeneID:782799 7 PSEUDO LOC782799 NULL similar to intercellular adhesion molecule-1 EMBV3_37516 GAAGGCAGCTTCCACCTGCACCACCCACATCATCGTTGTGTCTATGATCTTCATTCCCTG Gene GeneID:788693|LOC788693:XM_002695575:94_cdna Constitutive 0 NULL GeneID:788693 19 GENE LOC788693 NULL similar to olfactory receptor Olr1522 EMBV3_24528 GACGTGGTCTATGCTCATCCATTTCTCGAAGAACTCCTCGTTACCTTCGACCATCTGTGC Gene GeneID:513822|LOC513822:NM_001014922:11_cdna Constitutive 0 NULL GeneID:513822 12 GENE LOC513822 NULL similar to RIKEN cDNA 4832428D23 EMBV3_31269 CCGTCTGTGTGCCTTGATGGCTTCTGCTTCGTGGGTCACTGGTTTTGCCAACTCCTTATT Gene GeneID:616658|LOC616658:XM_002697453:60_cdna Constitutive 0 NULL GeneID:616658 23 GENE LOC616658 NULL similar to hCG1805526 EMBV3_18654 AGGAGATCCGAGGAGGATGAAGAGAAGGAAGAGGATATTGAAGTTCCAAAGGCCATGGGG Gene GeneID:337871|DICER1:NM_203359:145_cdna Constitutive 0 NULL GeneID:337871 21 GENE DICER1 NULL dicer 1, ribonuclease type III EMBV3_08503 CAGAGACTTTGGCCTCCTCGGGCTACCCTCACTGATTCAAACAAAAGCCGGAATTGGAAA Gene BVT0102_038896 + 1 EMBV3_14682 GK000002.2:91227106-91370423 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00110788 1 XLOC_066690 NonCoding TCONS_00110788 XLOC_066690 NonCoding NonCoding - 2:91278517-91280388 - TSS82409 1871 2 TCONS_00110788_3 65 0.103687867450561 1 0 0 8.05592455741292e-05 0 0 0 0 0 0 4.21707402857751e-06 0 0 4.96887266344397e-05 3.83390758861886e-05 2.5141637964898e-06 0.00026746782977483 4.23488702626416e-05 0.000727625630452513 2.68208293088235e-05 0 0 0 0.000174510652637607 0 3.58410533122774e-05 0 0 0 0 7.78399679851989e-06 0 NM_001103235.1 MPP3 Bos taurus membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) (MPP3), mRNA. 3e-48 197 84.86 0.0972741849278461 0 noncoding 0 0 0 0 -0.00680711159714814 0.948671757819243 -0.00122491990247714 0.985790880163263 AAGGGTACACTGTTTCTTAGGAGAATTTTTATGCAAGTAAAAAGAGTAATCAAATACTTAATCCTAATTTTAGAAAGTAAAACAGTATACTACCACTGTCTACACCTCTAACGTGCTTACTTCCTGTTACTCGGAGTGCTCAATCTTATTTATTTCTTGAAAATCAAATGGTAAAACAATTTTGGGTCTTTGGGCAATATATATATATATACACACACACACACATACATATATACATATACACAGATATACATACACACATATACGGCGTTGTGCTCAGCTGTGTCTGATTCTTTGCGACTCCATGGACTCTAGGCCACGAGGCTCCTCTGTCCATGGAATTTTCCAGGCAAGAATACTGGGTTGGGTTGCCATTTTCCTCCTCCAGAGGATCTTTCCGACCCAAGGATCAAATCCTCCTCTCCTGCTTTGGCAGGCAGATTCTTCAGCACTGAGCCCCTGGGAAGCCACGCGTGCGCACGCGCACACACATGCACCATAAAGCTCGTGAATCAAAGCCTTTGCTCCTTTTTTTTCTTCTCTGTTTAGAGGATTTTACTACCAAAAAACCTCTCCGCCTTAAGGGTAAACAGTATAAAAATATTTCCACTAAAAAGGGTCTGAGAATTCTGAGCTGGGATTACCACAACCCCTAATTATATAAGATACTTAGTATGATAACACCAACTAGTGTAAGGAATGTGCAGATTTATTTACATCAAGTTCAGATAAAGAGATAAAAGGGGACTTGAATAAGCAAGCAAAGATTAGGACTTCAGGAGTGTATATTTGAAGGTATCTTTGGAACTGCCCCTCAGCTACAATGAAAGACCAGTAAAACCAGCCTTCAGAATAACCCTTCTGCTTAGTAGGAGAAGGGAAGGCTAGAATTCACCTCTAAGATCGCCCTCCCACGCAGATTTTCCACCTAGCAGCTAAGAATTAAACCCAGACTTCCGATCATGGCGCCACGCACGTCACCTTCTCCCTCTTCGCCTAGCAAAATCCCACCCAAGTCGACCAGATCCTGCAGGAGTGTGTAGAAGCTGGAGGGCGGGGGGAGAATTCCCTTGCACAATCCTGGTAGCTTGGGGTTTTGCAATTCAAAAAACCCTGCTAAATAGATCCGAGCCCGATTCAAAGGAGGCTTAGATACCAGCAAGACCTGCTCTTTCCCTTGGGTGCGTAGACTCGACCCCACTCTTTACCCTGAGAGGCTACTCTTTACCCTGAGAGGCTACTCCTCACCGCAAATTTCCTTTCAAATGCCTTAGGGGCTTCCAAGGCTCCCAGCCTTTGTGAATAAAGGCCCACCCTCGAAGTGGAAACCTCGCTGCATAAGAAATATGCACAGACAGCAGGACAGCGAACAGAATTGCAAAAGAACGAGTTCTTTCTAGCTTTGCATCTTTTCGAATGTTCAATATTCCTGTTAGCCAAGAAGGGTTCCGGTTATGGGTACTTGAGGGAAGCAGGCCACCGATTAGAGCAAAAAACATCAATACAGGGGTGGTCTTTCCAATTCCGGCTTTTGTTTGAATCAGTGAGGGTAGCCCGAGGAGGCCAAAGTCTCTGGTTCTGGGAAAGGCGGGTCCGTCCCGATTCTTTTAGCTGCGGAGAGGCAGGCGCCGGCCCCAAGAAACAAAGGGGGTAGTTCTGCCCCTCCAGGCTTTTACTCCAGGAGTCCCAGAGGAGTCAGAGGCTAAATCACAGAGCTCGGAAGAGTTTGCCAAAGGTTGGACAACAGACGCGGCTGCCCTCTCTTAAGCACACAAATCCCACGCGTGCCCGTCTAGAAGGTATGTGAGCGTCAAGGAGAAAGGCCATTGCTGCCCATCGCGGGCGGCCAGCCCCGCCCTACTCTCGGTGGC TCONS_00102939 TCONS_00102940 . 5' 125 TCONS_00102939 TCONS_00102940 . 5' 125 EMBV3_05364 TCGCTCCGAGAACCTCAAGATCCACAAGAGGACCCACACAGGTGAGAAACCTTTTAAATG Gene GeneID:541035|ZIC3:XM_002699593:94_cdna Constitutive 0 NULL GeneID:541035 X GENE ZIC3 NULL Zic family member 3 (odd-paired homolog, Drosophila) EMBV3_35030 CTTTTTGAGGGAGACATCATACTTGATGAGAGATGAATGCCAGGGGGGTTATCCTCAAGG Variant GeneID:540701|MEP1B:NM_001144098:118_cdna 172^250 2 EMBV3_24692 GeneID:540701 24 GENE MEP1B NULL meprin A, beta EMBV3_24459 CCGAGGAAGATTATAACTTTGTCTTCAAGGGTACTATCGTGGTGCTGTGGGGGCCCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11736 CAGCTAGGATATCGGCACTGAACATTGTGGGGGATCTCTTACGGAAAGTAGGAGCTTTAG Gene GeneID:100138755|LOC100138755:XM_002689981:18_cdna Constitutive 0 NULL GeneID:100138755 9 GENE LOC100138755 NULL similar to nudE nuclear distribution gene E homolog (A. nidulans)-like 1 EMBV3_32775 TTTAGGTCACCCCAAAAGGTCGGGGCTTTAATTTTCCTCGTGGTTGGCATCATCTTCATG Gene GeneID:527476|SLC38A4:XM_002687320:129_cdna Constitutive 0 NULL GeneID:527476 5 GENE SLC38A4 Ata3 solute carrier family 38, member 4 EMBV3_40890 GCCCCGAGGAGATCCGCCGCCTCTTCCAGGACTGAGGCATGGCGGGACACAGGAAACTTG Variant GeneID:507313|MPST:NM_001034291:179_cdna 799^984 1 EMBV3_20650 GeneID:507313 5 GENE MPST MGC129095 mercaptopyruvate sulfurtransferase EMBV3_30191 CTACTCCTGACACACCTGTGAGGTCTTCTCCAGCGCCGTGCGTTCCATTTTCGCTTCTAT Gene BVV0102_369264 + 0 NULL GK000007.2:5325140-5335659 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215229 1 XLOC_130871 Coding TCONS_00215229 XLOC_130871 Coding Coding MAP1S 7:5334206-5367540 = TSS160792 4773 1 TCONS_00215229_6 1066 7 0.857018570185702 0.000874614299422563 0.000597894803714047 0.00101981622292192 0.000742901605940115 0.000856480806444552 0.000188279968943811 0.000426412452582895 0.000266428839157138 0.000391779422701162 0.000192234159381683 0.00043932572892431 0.000125107644265832 3.54677767255524e-05 0.000329664259511525 8.03785401303953e-05 0.000924102205876638 0.000316533252298086 0.00211850579382959 0.000581425921877121 0.00176885363785953 0.000449667225403696 5.75244607176062e-05 0.000355583917880638 0.000277478685950358 0.00148389564437539 0.00144363520678081 0.00113058425668398 0.000126780771523367 3.45809222424497e-05 0.000230489221021792 NM_001102114.1 MAP1S Bos taurus microtubule-associated protein 1S (MAP1S), mRNA. 0.0 5970 99.88 0.695369788393044 NM_018174.4 MAP1S Homo sapiens microtubule-associated protein 1S (MAP1S), mRNA. 0.0 3285 82.07 0.685941755709198 TCONS_00215229_6 sp|A6QQ70|MAP1S_BOVIN MAP1S_BOVIN Microtubule-associated protein 1S; 0.0 2093 99.72 0.99906191369606 0 coding 0 0 0 0 -0.118314898882044 0.500566439793855 -0.047125057028058 0.370506212107887 GACAGTAGGGCGGGCGCTCGGAGCGTCAGGGCGGCGCTAAGATGGCGGCGACGGTCGCAGGGTCCGGGGCGGCCGAGGTCCCCAGCTCGCTGCTGCTCGTAGTAGGCGGCGAGTGCGGATGCAGGGGGCTGCTTGCCTACGTGCTGGAGGAGCTTGAACGAGGCATCCGGTCTTGGGACATTGACCCTGGCGTCTGCAGCCTCGATGAGCAGCTCAAGGTCTTCGTGTCCCGGCACTCAGCCACCTTCTCCAGCATTGTGAAAGGCCAGCGGAGTCTGCACCACCGTGGTGACACCCTGGAGACGCTGGTCCTCCTGAATCCATCAGACAAATCCCTGTGTGACGAGCTCCGGAACCTTCTGCTAGACCCTGCCTCTCACAAGCTGCTGGTGCTGGCGGGGCCCTGCCTGGAGGAGACAGGGGAGCTGCTGCTCCAGACCGGGGGCTTCTCACCCCGCCACTTCCTCCAGGTCCTGGGGGACAAAGAGATCCGGGATCTCCTGGCCTCCACACCCCCGCCTGCAGCGCCGCCCAAGCTCACCATCACCTGCCCGACCTTTGGTGACTGGGCCCGGCTGGCCCCTGAAGTGCCCGGCCTGCAGGGCGTACTCCACCTGCGGTTGAACCCTCCGGTGCAGCTGCCGGCTTCCGAGGGCCTGCGCGAGTTCCTGGAGTACGTGGCCGAGTCACTGGAGCCGCCCTCGCCCTTCGAGCTGCTCGAGCCTCCGGCCTCTGTGGGCTTCCTCAGGCTCGCCCGGCCCTGCTGCTACATCTTCCCTGGTGGCCTAGGTGATGCCGCCTTCTTCGCCGTCAATGGCTTCACCGTGCTGGTCAACGGCGGCTCCAACCCCAAGTCGAGCTTCTGGAAGCTGGTGCGGCACCTGGACCGGGTGGACGCTGTGCTGGTGACCCACGCTGGCGCCGACAGCCTCCCGGGCCTCAACAGTCTGCTGCGACGCAAGCTGGCGGAGCGCGACGAGGCGGCTGCTGGCGGGGGCTCCGGGGACGACCGGCTCCGCCGGCTGATCTCCCCCAACCTGGGCGTCGTGTTTCTCAACGCCCGCGCTGCTGCCTCTCGGCTGGTGCGTGGCGAGGATGAGGCCGAACTGGCCCTGAGCCTCCTGAGCCAGCTGGGCATCACCCCTGTGCCCCTGAACCGAGGGCCACTGCCTGCTGAGCCCACCGTGCTCTTCCAGAAGATGGGCGTGGGCCGGCTGGACATGTATGTGCTGCACCCGCCCTCAGCCGCCACCACTGACCACACCCTGGCCTCCGTGTGCGCCCTGCTGGTGTGGCACCCTGCGGGCCCCTCAGAGAAGGTGGTGCGTGTGCTATTCCCTGGCTGCACGCCCCCCGCCCGCCTCCTGGATGGCCTGGTCCACCTGCAGCACCTGGGGTTCCTGCGGGAGCCGGTGGTGACGCCCCAAGACCTGGCGGGGCCTCGGCGAGCTGAGAGCAAGGAGAGCGTGGCCTCCCGGGACAGCTTGAGGAGAGAGGGCCGCACGACAGTGCCCTCCAGGCCCACCCAGGAGCGCCCTGGGGTGGCCCGGAAAGACTCTCCACGGACTGAGGCCCCTCGCAGGGCTGAGAAAGAAGCCAGGCCCTCCCGGGAGGTGAAGAAGGACCCCAGACCCAGTGCCCCTCGCACCCAACCCCGGGAGGTGCGCCGGGCAGCCTCTGCCGTGGTTAGTGGCAAGAACGTGGGTGCCCAGGTGGCTCCCAAGACCCGCAGAGCACCCAACACACCCCGCCCAGGGGTCCCACCAGCTGAGAATGGGCCCCGCAGCCCCCCCAGCTTCCGGAGCGGAGAGGCCAGCCCCCCGACAGAGGCCTGCAGCTCCCCGGCCCCCCAGCTTGTGGCCACACCCAGCCAAGAGAGCAGCCTGGATCTGGGGCTCAGCCCGGCAGGGGAGGAAGGCGGCAGCTTAGAGGAGAAAACCCTGGAGCTGCTGTTGGCCGCCAGCACCCCCGAGCCGTGCACACCCTCTCCCGCCGGGGCCCAGCAGGGCCCAACAGAGAGCAGCGGGCCGCTGTCGCTGAGCCCCCTGCGGGGTGGGGAGCCCGGGCCAGATGCCTCCCCCACAGTGACCACGCCCTCGCTGCCCGCGGAGGTGGGCTCCCCACACTCCACAGAGGTGGACGAGTCCCTGTCCGTCTCCTTTGAGCAGGTGCTCCCGCCACCAGCTGCAGCTGCGAGTGAAGCTGGGCTCAGCCTCCCGCTCTGCGGCCCTCGGGTGCGGCGCTCGGCCTCCCCGCACGACGTGGACCTGTGCCTGGTGTCGCCCTGTGAGTTCGAGCACCGCAAGGCCGTGCCCATGGCGCCAGCCCCCGTGTCCCCCGGTAGCTCCAATGACAGCAGCGCCCGGTCGCAGGAGCGGGCGGGAGCTCCGGGAGGCGCCGAGGAGACACCACCCACATCTGTCAGCGAGTCCCTGCCCACCCTGTCTGACTCGGACCCCCTGCCGGCTGCCCCTGGCACTGCCGACTCAGACGAGGACACGGAGGGCTTCGGGGTCCCCCGCCGTGACCCGCTGCCTGACCCCCTCAAGATCCCCCCACCGCTGCCCACCCCACCTAGTATCTGCATGGTGGACCCGGAGATGCTGCCTCCCGAGCAGGCCCGGCTGAAAGGAGGTGGCAGCCGTACCCGGAAGCCCCTTACCCGCCCCAGCTCTGGCACTACTCCCCCCAAAGCCACTCCAGTGACTGCTGCCAAAATCAAGGGGCTGGCCAGTGGGGACAGGGCCAGTCGGCCACTCAGCGCCCGCAGCGAGCCCAGTGATAAAGGAAATCGGGCATCCCTGTCCAGAAAGCCCTCGGTCCCCAAGACAACCACTCGAGGTCCATCTGGGTCAGCTGGCAGTCGGTCAGGAGGGTCAGCGGCCCCACCGGGCTCCCCTGTCTACCTTGACCTGGCCTACCTGCCCAGCGGGGGCAGTGCCCGCCTGGTGGATGAGGAGTTCTTCCGGCGGGTGCGTGCGCTCTGCTACGTCATCAGCGGCCAGGACCAGCACAAGGAAGAGGGCATGCGGGCTGTCCTGGACGCGCTCCTGGCTGGCAAGCAGCAGTGGGATCGGCAGCTCCAGGTGACCCTGATCCCCACCTTCGATTCGGTGGCGATGCATGAGTGGTATGAGGAGACACACACGCGGCACCAGGCGCTGGGCATCACGGTGCTGGGCAGCAACAGCACCGTGTCTATGCAGGACGAGGCCTTCCCCGCCTGCAAGGTGGAGTTCTAGGCCCCCCCCAACAGCACCCCCAGCACCCGCCACTGTCCTGGGACGCGCCTGCATCAGAAATAAACAGGGTGCGACTCAGCCGTGGTCTCAGTTCCTTCTGCCGGCAGGAGACTCGGCCGCACTCCAGACGCCACTGCTGCCAAGGGGTGGTCCCCAGTGTGGGGAGGGACAGCTTCTGCGGAATCCCCAGCAGCCTCCAGGTCACATGTGCCCTGGCCCCCATGTCACAGATGGAAAACCCAGGCCCAGGGAGGCAGTGCCTCCCAGGCCAGCAGAGCTGGCTGCCGACATCAGCCCTCCAGCCCAGCAACTGTGCCTGTGGGTCCCCCGGTTTATAGACAGGAAGGCAGCTGCCAAACCCCAGCTGCACAAACCAAGGTGAGATCCGAGCCCTGACTCTGCTCCCGATCCATTACAATAGAAATCACCCTCTGTTCCTAGAGATGATTGACACTCATGGCAGGACAGTCTTATACTCTACAGCAAGCTCTCAACTCATTATCGACCGGGAGGTTTTTGCAGACACTAATGCTCGTGGCCAGCATTTTTATTTTGGCCGGCCAAAATTTTCTTCTGTTGTTTCACTAACACTGTGTGGGTTATTACGTTCAGTAGTTACTCCTGACACACCTGTGAGGTCTTCTCCAGCGCCGTGCGTTTCATTTTCGCTTCTATGTCCGAGTCAGTCACTGGGGTTTCTCGTCTTGCGTCGGTCTGACGCTCACGCCGTCTGAATCGGAGCTGTCGTCTGAAGAGCTGCCGCCTTTGGCGACACGACTGCGTATCTCACTTGGACAGTCAGAGCCGGCATCTCGTAAAACCCGCGGACAAGGTCTCCTCAGAATGTAGCAATACGTCATTTTTGAAAAATTTACGGTAACAAACTTGTGTTTATAAAATACACAAGGTTGGAACTAATGGAGGAAAACGTGAATGGTAACGACAATCGTACATTGTATAATGAACCCTTGACCAGTTTTAAGCTCTGACAACTTTGCCTGGTGTTGTTAATTGTATTACTGTCTAAATATTGATACGTCTTTGGTCAATAATGTTCAGGTAACAAAAGATGTATTAATATGTCTTCAGTCAGCAATGTGTTTAAAACGCAGTCTGAAACCTAAAAGCTACAAAACACCAATCTCCCGATGAACCCCCCTCCCTAATCTCCCTGTTCTGCATGTATAGGAACACCTAGATTTAATTTTCAGTAAGATGCCATCTCACTGGATTGGATGGCGACCTAAGAAAAATGTGACAAGTGCTAACCCCTCAGTACCTACGCTCGTTTTCCTGTAAGGAGAGACCTCTTAGTCTGGGGTCTGAAGAAGGCTTACTGTTTATGCCGTGTCGCCCTGATTTTTCATCTTGTTGAGTACAGGTGCAGCCTCCTGTTCTCATTTCATTTCTTTCTAGGAACATTTTCTTATATTTATTTTTAATTAGTTCAATTTTTTTATTTAGACGTTGTCTTTTTCTCATTCAGATATCATAATTCTTTTTTTTTTCTAAATAGGGACAATAAACTTGT EMBV3_15565 AGGATGGCTCTCTTTGCTGGCGGCAGACTGTATCGTGAAGAGCGCTTCCGTCTGATCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14942 GAGCCACATGGTTCCAGAAAACCTTACTAGTTGGGGAACACATGAGCTAGACTAAGCCCA Gene BVV0101_075421 - 1 EMBV3_03785 GK000007.2:105360592-105587468 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00306 AGGCAGTCAGTCTCAATGCTCTGTGTTCCCATGAGTCCAAGCGGGGCCTGTAAGTGGACA Gene GeneID:507686|SLC25A29:NM_001077871:190_cdna Constitutive 0 NULL GeneID:507686 21 GENE SLC25A29 NULL solute carrier family 25, member 29 EMBV3_02614 AGTGTCGATCTAACAGGTGTCCTGCTGGTGATGCTCAACTTCACGGTGCTGGAGCTCTTA Gene GeneID:767975|MS4A7:NM_001077040:30_cdna Constitutive 0 NULL GeneID:767975 15 GENE MS4A7 NULL membrane-spanning 4-domains, subfamily A, member 7 EMBV3_02097 GGTCTGTGCCAGCAGCTTAGTGTTGTAGCTGCTTATGTTATAAAAATGTCTTCCTGTCTC Gene GeneID:509871|NMD3:NM_001075420:121_cdna UTR3_Alt 3 NULL GeneID:509871 1 GENE NMD3 MGC142487 NMD3 homolog (S. cerevisiae) EMBV3_08385 AGCTGACGGCTGCGAGGGATTGAGACCAGAAAATGAGTTGCACCATTGAGAAGGCACTTG Variant GeneID:532881|FGFR1OP2:NM_001102147:14_cdna 182^299 4 EMBV3_05261 GeneID:532881 5 GENE FGFR1OP2 MGC143105 FGFR1 oncogene partner 2 EMBV3_07286 AGTCAAGAATTTCCAGATTGTCCACGCTGATGACCCCGACTACATCGTGCTGCAGTTTGG Gene GeneID:613862|TULP1:XM_002697211:108_cdna Constitutive 0 NULL GeneID:613862 23 GENE TULP1 NULL tubby like protein 1 EMBV3_08401 ACCAGATAAGAACATTACCAGAAACAAAAGCTATAGGCCAGTGCCCTTGATGGACACAGC Gene BVT0101_071365 + 1 EMBV3_15882 GK000009.2:27992015-28046279 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234943 1 XLOC_144132 Coding TCONS_00234943 XLOC_144132 NonCoding Coding - 9:27990852-27994962 - TSS176260 2610 1 TCONS_00234943_4 105 0.446360153256705 2 0.365295692382575 2.35068811880932e-54 4.38868660947485e-05 3.5509931254825e-200 6.40135536179464e-05 0 3.24044821613881e-134 0 0 0.000184961090945735 0 1.75416522922477e-06 5.479980138491e-05 1.13849305101386e-06 1.80229441885077e-06 0 0.000293462244328666 0 0 0.000130727879764266 9.06826517775206e-06 2.32623151310285e-06 0 1.89553449042157e-05 1.71521153521659e-128 2.68955456886062e-05 6.12677899741017e-06 6.35651662292524e-05 3.68014424436492e-06 0 1.6124823092728e-05 XM_617403.7 TRIM24 PREDICTED: Bos taurus tripartite motif containing 24 (TRIM24), 5e-22 111 83.84 0.0375478927203065 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-33 149 69.41 0.126053639846743 0 noncoding 0 0 0 0 0.040004942971656 0.728078561087096 0.0208692941243262 0.686390822790419 CACTCCAGTATTCTGGCCTGGAGAATCCCATGGACTGTATAGCCCATGGGTTTGCAAAGAGTGGACACGACTCGGACACGACTGAGCGACTTTCACTTTAATCCAATGATTTACAGAAACTGTGAAAACCTCTAAGCAGTAGCTGGAGACCATAAGAGATTGCTCTAAGATTCCGCAACAGCATTCTGAGGCATAGATTATTTAATATGACTAAGACATCTATGTTACCTCTGTTTTGAGGTGAAAAATTTGTTAAGTCTATTACCAGGAACGCGGTGCCAGGACCCCTTGTTGCCCTGATCATCCTTGTTGACCCGGAAGCAGTTTCCGGCCTCAGCCTCCCAGTCCTCGCGATGCAAGAGCTCTGAACCCTGGAGCGTGCCAGGGCCTCCTGATCTTGCGCGGGATATTGTGAGCTGAATGGGCATGTGCACGCCGCCCGGCTCCGCCCCTGCCTTGGTACCCTGGACCTGCTGGCGGGTGGTGTCCGTGTGCTCCTGGCCCTGCCTCGGGTCGCATCCTCTTCTGGCCGCATCACGGAGGTGTCCACGTAGGCGGGACCAGGTGATTTCACTGATCAAGTCTATCCAACATTTAAAGAAAAATTAACAGCAGTCCTTCTCAAACTCTTCCAAAATATTGAAGAAAATAGACTGCTTTCAGATTCATTTCTTGAGGCCTGCAATATCCTGATACCAAAACCAGATAAGAACATTACCAGAAACAAAAGCTATAGGCCAGTGCCCTTGATGGACACAGCTGCAAAAATTCTCAAGAAACTATTAGTAAGCTGAATTCAACAATAGGTTAAAAGGCATACACCATGATCAAGTGGGATTCATATCTTGGATGCAAGGATGGTTTAACAACCTCTACATTAATAAAATAAAAGATAAAAGTCATATGATCATCTCAAAATGTGCAGAAAAAGCATTTGACAAAATTCGGCAGTAATTTTGAATTCCTCCTACAGTAGATGAGAGCCCATTTGTGTTCTATCAGGAAGGCCAGCTGGCTTTCATACTTGATTTTCAATTGCATATTAATGACTGTAAGCCTTTCATTTTCTTTTTTTTTTTTTGAAAATGTTACTTCACGCAATTTCTTATAATTACAATTTCCCACATACTTGTCAAATATCTGATAGAAGCCAGCTAGTGAATTCCCTAACTCAATTATACAATTCCAGTTTACCACAGATGGAAATTTTATCAATTAGGCTGCCACCAGTATTAATCTGTTCTCCACCTACAATTAGTGATGAAGCTCTTATTGCTATAGCCAGGCTACAACTGATGATTGGTGTTGCTCTAAAGCCTCAGTCCTGGTTATCAGCAGTTATAGGTGGCATGCACTGGGAAGCAGATTCTGGGATGGAATTTACCATTTATGGTATTGATTAGGAATTATCCTCAAAATATATACCCCTGGAAGGCAGAGGAGGGAAGCAGGATTGAGCAGAGAGAAAAGGCAAGCTGTGATGCAGGCCACTGTGAGTTTTGGCCAACGTGACAGAGAGCTCTGAAGCTTAAGTGGACTATCAGTGTTGTCACATTGAGCTCAAAAATCCAGGCATTCATGTGCTGACTTTGATCAGTCATAGTGTATGGGCTTCCTTGGAAGTGTGTCCCTTTCACTGAGACAACCCTTTACAACTGAGGCATTTCTGCAGGGTACTGGAGCAGTTGGGTGAGACATTGACTACAGGTGTCAGTTCTGTGTAACATGAATTTATAGGCTCCTGGAGTTACCAGTAAGGTGCTGATGTAATCCACTTGCCAAGTGTGTTCTCAGGGAATTCTTCCTAAAGCGATTTTCATGTGGTTTCTTTGTCTTCATATGAAGTACAGTCCTTTGACCCATTGGTGATTTCAGCAGGGGCAATGGAATTACATCATCATTTGATCCGCCTTTGCTTTGCTTGGGTGTCTTGTGCCATTTTGTCTTACGAACACAGAAAAATGTGGATTTTATTGGGGAACTCCTATCAGTGAACTAAGTAGCCTCTTTTACCTTGGTTTGAAAAGAATCAGAATTCAGAGCATGGAATGATGGGGGTAGCTGGATACTTAGTGGGCTCTACCACTGGTAGTGAAGCAGCCTGCTTACGCATATGTACTGAGGAACTCCCTCTGAACGTCAGCCCTGTCCCTTGTTTTCAAATGTACCTTTTGCCCTTTATCAGTGGGCTCTGTTTCCTCCGTCACTTTACCATTCCTCTGATCGTATCCAAATTATTATAGACCATTTTAATCTCAGGGTTATCTGATGTTCTCCTGTAGTGGGAGGGGTCTAGCAGTACTCAGTGGCAAGCTGGCTGTATTCCTTTGTAAAGGACATGAAAACATCTGCATCAGATTGCTCTCAAATCTGAAACTCCAGGAGTTTCCAGTGAAGAACAGTATTCAGTTTCTATCATATGTCCCAAATGACATGTGATCTGTTTGCGAGCACTTTTAAAATCAGCTGGGCATTTGAGCATCTTATCTTTCAGTATGATTTGATGAGTAATGCCTGGAACCCAAGCACGTGTAAATCTTTTTAACTTTTCCCTTCTCATGATCTCATTCAAAAGGGAATTCTTTCTTAATCCCTGTTAGTCTGTCTGTC TCONS_00234948 s 5' 0 TCONS_00234944 TCONS_00234948 s 3' 1501 EMBV3_02594 TTTTCATGCTCCTCATCTCGTACACAGTCATCCTGAGCTCCCTGAAATCCCATGGCTCTG Gene GeneID:518869|LOC518869:XM_002692881:74_cdna Constitutive 0 NULL GeneID:518869 15 GENE LOC518869 NULL similar to olfactory receptor 1231 EMBV3_23689 CTCTGGAAGAGTTGAAGCACATCCTCTATCATGCCTTCCGGGACCACTTAACGATGAAGG Gene GeneID:538163|CALN1:XM_002698077:74_cdna Constitutive 0 NULL GeneID:538163 25 GENE CALN1 NULL calneuron 1 EMBV3_15980 AGCTGGAGTGAGAAGCAAGGTGGCTATGGTCACAGCAATATCTCTGGGCTTTAACAATGC Gene GeneID:782657|LOC782657:NM_001110094:14_cdna Constitutive 0 NULL GeneID:782657 9 GENE LOC782657 MGC152035 hypothetical protein LOC782657 EMBV3_34637 CCCTGCCAATGCCGTCTACTTCTGTAACAGCCTGGCACTATCCAGCCTGAACAAGCACAC Variant GeneID:504701|SGTA:NM_001038030:8_cdna 536^640 2 EMBV3_17104 GeneID:504701 7 GENE SGTA MGC134165 small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha EMBV3_00066 CCAAGCTGGAAACTCGGGGAGTTGGGCCCAGAATAAAAACTGGCATACTTGGACTCAACT Gene GeneID:506207|CCKAR:XM_002688160:46_cdna Constitutive 0 NULL GeneID:506207 6 GENE CCKAR MGC166046 cholecystokinin A receptor EMBV3_05602 ACAGAACCTGACCCTTCAGTGTCACTCTGACGTCGGCTACACCAGATTCGCTCTGTCCAA Gene GeneID:510520|LOC510520:XM_002683985:1_cdna Constitutive 0 NULL GeneID:510520 Un GENE LOC510520 NULL similar to leukocyte immunoglobulin-like receptor, subfamily A, member 6 EMBV3_23318 AAGACCCTGAACCCTTACTTCAACGAGTCCTTCAGCTTCGAGATCCCCTTTGAGCAGATC Gene GeneID:100300626|LOC100300626:XM_002694256:236_cdna Constitutive 0 NULL GeneID:100300626 16 GENE LOC100300626 NULL hypothetical LOC100300626 EMBV3_16695 GACTGTCTCCTGACTCAGCTTTTTCAGAAGTGTTACGTTCCATCTATGCTGACTGCAGTG Gene BVT0102_114323 + 0 NULL GK000002.2:94383130-94455657 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103043 TCONS_00103049 1 XLOC_062002 Coding TCONS_00103049 XLOC_062002 Coding Coding PARD3B 2:93222593-94387190 j TSS76602 7861 1 TCONS_00103049_9 894 0.0259508968324641 22 0.993268910420438 0.000678930226507896 0.000447912237687885 0.000174199466568843 4.03462597863551e-07 0.00020154391362714 3.95801656206416e-06 0.000189559820545532 0.000542072547280714 0.000404176869110911 2.54493044091319e-05 7.03101335137169e-16 4.41728511853835e-10 1.99915595581835e-05 0.000192672388870948 2.11963088349755e-17 0.000327609428308345 0.000102104645267225 1.34564280586838e-09 0.000349105500054236 0.000388933310852885 0.000235725836549459 8.00581318898756e-05 1.28972557548958e-07 5.26095342996214e-05 0.000271851851030442 0.000340910927297399 0.000386754199333201 4.80731075319714e-33 2.5059347135311e-08 8.81256431911769e-06 XM_002685529.2 PARD3B PREDICTED: Bos taurus par-3 partitioning defective 3 homolog B (C. elegans) (PARD3B), transcript variant X3, mRNA. 0.0 1.119e+04 100.00 0.789339778654115 NM_057177.6 PARD3B Homo sapiens par-3 family cell polarity regulator beta (PARD3B), 0.0 3418 78.72 0.513039053555527 TCONS_00103049_9 sp|Q8TEW8|PAR3L_HUMAN PAR3L_HUMAN Partitioning defective 3 homolog B; 0.0 851 79.82 0.544742729306488 2 coding 0 1 1 0 0.0261727935375293 0.882347881951914 -0.00697560604286206 0.883008863829649 ATGAAAGTGACCGTGTGTTTCGGCAGGACCGGAATCGTGGTGCCCTGCAAGGAGGGCCAGCTGCGCGTCCGGGAGCTCACACAGCAGGCTCTGCAGCGGTACCTGAAGACCCGCGAGAAGGATCCTGCCTACTGGGTGAAGATTCATCACTTAGAATACACAGATGGAGGAATCCTAGATCCAGATGATGTCTTGGCAGATGTTGTTGAAGACAAAGATAAGAGTGCTCCAGGAGGAAGGGACTGCATGCTTTGTGACCATTCAGCCTCAAGTCCCAGGACAGAGATCTACTCCATGGCCCATGAGAGCCGTGCATGCCCTGCTTCATGCTCTGAGCTTACTCAGCTAATACTCTTCCTGGGCCGTGTGCCATATGGTCTGGGAGTCACACTAGAAACAGCTGGTGACTTCTCTGTTTATTAGTAGCAGTGGTGTCTGAGTAAGCTGATTGCTGTGTTTGACGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAATCCGGCAGGCCGGCAGAGCCCAGATGCTTTTGAGACGGAAGTGGCTGCCCAACTGGCTGCATTTAAACCAGTCGGTGGGGAAATTGAAGTAACCCCTTCTGCTCTGAAATTAGGCACTCCACTGCTGGTGAGGAGAAGCAGCGACCCAGCGCCAAGCCCACCTGCTGATGCCCAGTCAAGCGCTTCACACCCTGGTGGGCAGAGTCTGAAACCTGTGATTCCAAATTCCACGGAGGAATTAGAAGATGGAGAAGTTATGAATGGTATGCAGACAGAACTACTGACATCACCAAAAACTATGGATGTGTTGAGTGATATGACAAGAACGGTGGAGATTTCTGGGGAAGGAGGCCCCTTGGGAATACATGTAGTGCCTTTCTTTTCATCTCTGAGTGGAAGGATTCTAGGACTCTTCATTCGTGGCATTGAAGAAAACAGCAGGTCCAAACGGGAGGGACTGTTTCACGAAAATGAATGTATCGTAAAAATCAACAACGTGGACCTCGTAGACAAAACCTTTGCTCAGGCTCAGGACCTCTTCCGTCAGGCAATGAAATCTCCAAGTGTACTCCTCCGCGTGCTTCCACCTCAGAACCGGGAACAGTATGAAAAAGTAGTCATTGGACCTCTAAGCATTTTTGGCAACAATGATCACGTGTTGAGAACAAAGGAGCCGCCTCCTGTCCATGGAAAATCAGGAATAAAGACAATAAATCTCACAGGAACAAGCAGTCCTGAAGAAGATGCATCAACTTCTCTGCAACAGAGCAGGAGCCCCCGAGTACCAAGACTAGGTAGAAAACCATCCTCTCCCTCACTCTCCCCACTCATGGGGTTTGGCAGCAAGAAGAATGCAAAGAAAATTAAGATTGACCTAAAGAAAGGGCCTGAAGGACTTGGTTTCACTGTGGTTACCAGAGATTCTTCCATACATGGTCCGGGTCCCATTTTTGTAAAAAACATTTTACCAAAGGGAGCAGCGATAAAAGATGGCCGCCTGCAATCAGGGGACAGAATTTTGGAGGTCAATGGCAGAGATGTCACTGGACGAACTCAGGAAGAGCTTGTGGCCATGCTGAGGAGCACTAAGCAGGGAGAGACTGCATCGCTGGTCATAGCCCGCCAAGAAGGAACTTTCCTACCCCGAGAGCTGGATGGCCGTCTGCGGATGAATGACCAGCTGATTGCGGTTAATGGGGAATCTCTTCTGGGAAAGTCCAACCACGAAGCTATGGAAACACTTAGACGATCCATGTCCATGGAAGGAAACATCCGAGGGATGATCCAGTTGGTGATTCTGAGGAGGCCAGAGAGACCAATGGAGGAGCCTGCAGAATGTGGGGCATTTTCTAAGCCCTGCTTTGAGAACTGTCAAAATGCTGTAACCACCTCCAGGAGAAATGATAATAGTACATTGCATCCATTTGGCACGTACAGTCCACAAGACAAACAGAAAGACCTATTGCTTCCCAGTGACGGATGGGCTGAGAGCGAAGTACCACCTTCTCCCCAACCACATCCCGTTCTGGAATTGGGCCTTGAAGATTACAGCCACAGCTCTGGGGTGGACTCAGCAGTATATTTTCCAGATCAGCATATCAACTTTAGATCTGTGACACCAGCCAGGCAGCCTGAATCAATGAATCTGAAAGCCTCAAAGAGCATGGACCTCGTGCCAGATGAAAGCAAAGTCCATTCATTGGCTGGACACAAATCGGATGGTCTGTCTGATAGGAGCTCTCACTCTGGTCAAGGAGCTCTGAATTGTGAATCTGCCCCTCAGGGGAACTCTGAGCTAGAAAATGCAGAAAATAAAGCCAGGAAAGTCAAAAAAACGAAAGAAAAGGAGAAGAAGAAGGAAAAGGGCAAATTAAAAGTCAAGGAGAAAAAGCAGAAAGAGGGAAATGAAGATCCAGAAAGGAAAATAAAGAAGAAGGGATTTGGTGCCATGCTAAGATTTGGAAAGAAGAAAGATGATAAGGGTGGAAAGGCAGAGCAAAAAGGTCCTCTGAAGCAGGGTGGCCTGAGAGAAGAGGAACTGGAAAAAATGAAAGAAGAACGTGAGAGGATTGGAGCAAAACATCAGGAGCTAAGGGAAAAGCAGGCAAGAAGTCTTATTGATTATGCTACTGGTGCAATTGGATCACTGCATGATATGGACGATGATGAAGTGGACCCCAACTATGCCAGAGTGAACCACTTCCGGGAACCATGTACATCAGCAAATGTCTACAGGTCTCCATCTCCACCTCGGGCTGGACCACTGGGCTACCCTCGAGATGGCCGTCCACTGTCTCCAGAGAGAGACCACTTGGAGAGTCTCTATGCCAAGGTCAACAAGCCATACCATCCACCAGTGCCAGCTGACAGTGGCCGGTCCATGAGCGGAAGTGCTGACCGCATCCAAAAGCTGCGGAAAGAGTATTATCAGGCTCGGAGAGAAGGTTTCGCTTTATATGAGGATGACGAAGGAAGAGCAAGACCTGAGTATGACCTTCACTGGGTGTCTGGAAAGGGTCCAGATGGGAACGCACACAACCTCCGCTTTGAGGGGATGGAGCGACAGTACGCCTCCTTACCCAGGGGAGGACCAGCAGATCCTGTAGACTACCTGACAGCCGCATCTCGAGGGCTCTACAAGGAAAGGGAGCTTCCCTATTACCCAGGGGCTCATCCTGTGCATCCACCCAAAGGAAGCTATCCTCGCCCCCCAGATCTGAGAGTCACGGATCTCCGGTATCCCCAGTACTACCCACCCCCACCAGCCCCCCAGCACAAAGGACCTTTCCGACAAGATGTCCCGCCTTCCCCTCCTCAGCACCACAGAGTACCAGCCTACCCAGAAATGGGCAGACCAGGGCCCCGAGGGAGCAGCCCAGATCAGTACCCCTACCGAACCCAGGATCCTCGGCAGAAGAACCCCATGACTGCAGCCGTGTAGCTCAACACCACCAAGCTCAGCCCAGCCCAGGACGGAAGACATCCAACATCACCTTTGTTCTTCCTACACCTTAAGGCCTTCTTCCTATGGAGAATTCTCTGTGGTACAGATTAGATTTTTCTCACTGAAGCTGCAGCACTTGACCACTAATCAGAAAGAATGGAGTAGGAGTTTGGGGAGGGAAATCAGAAGGAAGAGGAAGGATAGGGTCATAAAAACAAAACTGCCTGATATTTGAAATACGTTTAGAATTGTTCAGTTCACCGAGAGTGGCAATTGAACAGGCAGAGAGCAGTGGAGATCTACAGCATGGCCACCTCTCTGGAACACAGACATGCATAGCATTGGCGTCATGGCGGGGAGAGGGGCCAGTCTCTGTCTGGGACATCATCCATTCAGAGGCTAAGCTTCAGCCACCTCCTTAAGTTGTTAAGTCTGTGAAGAGTAGCTGCAAATATGGGCATCCTAAGAGAGTAGTCTTTGCATTGAGAAAACAACAACAAACATGAAGAGTGAGCTCCTTGAAATGTTTTGTACCCAGAGAAAGGCTGCATTTATTTGTAGAATTTCTCAGGTTCTCAGTACCACTTACTTGGTATAAGCATTTCATGTTTCCTCGATTTTTATATAAAAGATGTGAATGCAGTATTAGTGTCCTGGGAGAATTCACAAAGCTAGTCAGAGCTTCCAGAAGAACTCTATGCCTAGGATCAAGGCAATCAAGTTAAAAGGCTAAAATTCCCGTGGTCCTCACCTTCCTTTCTCCCACATCCCAGGCAAGATAGCATAGAGATATCTGGCTTCAGACTCATCCCCAGATCTCCTGCTTGTCATTATTGTAACTGGGGCCTTTACTTTAAGACTCCCACTTGAGAGCTGAGATGTACTCAGGAAAGAGAGGGCCCTCTGGTTAGGTCACCCAGGAAGCAGTGCTCTGGAGATGCCAATTCTAGACTCAGTGCCAACCAGCACCATGTGCAACCAGGGTCAGGAAAGGGCTGACGGTGCTCTTTGGGAATGATAAGCAAGCAGTAGTAGTGTGTGCGTATGTGTGCGTGTGTGCGTGTGTATGAAGGTGTGTGATTACCAGTATGGAGAATGGAAAATAAAAATACTTTCTGGAAAGTTTGATGAAGAGAATAAAAAGGAAAACAACAAACAAAACAGAAGGGAAGGGAGAAGGAGCATAAAACTAAATCACTCTACATCTGCTATATTTCATTAACACGAGTCACAGCAAGACCAAGGCCAAGGTCTCCAGTTGGAAAAAGGTCTTATGGCTTTGAAAAGCTAAAACCCCACCCTCCAAAATCCATCACAATTTCTTTAGAGCTTTGCACATATATTCTACTTATTTCAACATAGATTAGAACCTCTAAACCCTGACCCAAATGAGAACACAAGAGAAGATGAGAAACAGCAAAGCATGGGAGCAGCAACTCAAATTGCTCAGTGACCCTTGCAGTCCTCTAAGCCTTTTTACATTCCTTCTTCATTCCCTCCCCCCAAAAATGCCTTGAGTTCAGTTCAGACATATTCTGTCTGAGATTAGAATACCTCTGACTGCTAGGATTTCATAAATTATAATATTGATGTTATTGAATACATAGAGTATCTATCCTGCCCAGTTTAGTATTTTTTTAAAATTTTAAAATATAGTTCTGTTACCAAGAATGATGCAACTGCTGGGTTTAGACTTAACTAGTGTTATTTACTGAACTTAAAGAGGTATCATTTTCTAAACTACAGTTTACTTACGGCCCTCTTGAGAATAGGTTGTCGAGTTGTCTTTGGCCCTCTATCATCTCTTTTAAGCCAGGCACCTTTAGATTCTTTGCAATTTGTTCTGAGGTTGAGGACTGGGCCCTTCTCACCTCAAGGTGGAGTGTAGGTGAACCATAGGGTTTCCCTGCCAACAAGCTGCAAGCTGCCTTCCCTTGAGCTAAATAAACTTTCAAGAAGACAATGGTGAGATGAGAGAAGTATGATGTATTTTGAATAAAAGCCAGCTCTTCAGGATGTTCCATAGTTTAACCAAATTTCTGTAGACTACTGGATATAGCCAAGTCAGAGGTTTCCTTCTGGATTAAGGCCAAGTTCCCCTAAGGGGCAGTGATGGAAGGTGAGACACTCAGAGCAGCCCCAGTAGAAAGAATGCCCATATTTTCACCACGTTGCCAGCTTGTGAGCATGGTATCTCCTGCACTAAGGCTCAAGAAAAGCTGCTCCAAGCATGGTTTTGAGTGTGTGTGTGCTCAGTCGTGTCCTACTTTGCCACCCTATGGACTGTAGCCCACCAGGCTCCTCTGTCCACGGACTTTTCCAGGCAAGAATATTGGAGTGAAGTTGCCATTTCCTCCTCCAGGGCATCTTCCTGACCCAGGGATCGAACTGGCCTCTCCTGCAGTGGCAGGTGGATTCTTTACCGCTGAGCCACGTGGGAAGCCCTTTTGTGTTGTATACACAGGCAGTAAAGCAATTGCTAATTCTGAGGGGCAGTCAAGGATGTGAATGTACTATTAAAAGTAATGGGAAAAGATTATAGCAGTTTTCTTTTCTTGCTTGAAGTATAACACATGACCTATTTGACCTTACCCAGAAGAAGCCAACATTGTGTGTATTACAGTCTTCATCAAATCAAGTAACAATAAAGAACAGCTTGAATGTAAGCTTTATAAATGCCTGTGATCCAACCCAATTGTCACCACCCAGAGGTTATGGAACTCTTTCCCAGTATTTCGAAGACCAGGATATAATCAGTGGGCTCCTAGTAGCAGGAAGTAGTTCCTGATTTATTTTTGGCCTTGGACAAACTCAGTCTCAGAATGCAAATAGCCCCCCAGGAAAAGGTGGCACTGAGAGCTTGGTGAGCTGAAAACCCACCAATGTATACCTGCCTGGCTCCTGATCTGACCACTAGGTCATCCAGAGCTTGAAGTGATGTGTTGACCTCAAGTCACTAGATATTTTAAGGAGCTCTTTTTCTGTCCCTTTTTGCAGGAGTAGAGAGATGCAAGAGAGCAGACCACAGAATGCATTTAGATGCAGGCAAACTCAGTCCTCTACAAGGGAGAGAAGAAACACAGCGTCTCACTAACCCTTCGTGGCCTTGGGCTGTGTCAGTATCACTCTTGGTATAATATTGCTTCCCCACAATATCACGTCACTGGATGAAAGGAAAGTCCAGAGTCAGGAGTATTTTCTCAAATCATGGTTGAGTAACAACAAAAAGTGGGGGGAAATTTACTGTGAAGCTCCTTATTAGGTTTTTAGATCTGTATGTGTTGACTTCACAGTATAGTACAGAGCAAAGATCTTATAATTAACAGCACTGTCACCCCGAGGAGGAAACTCTGTGCACACGAACTGATAAGAGGAGATTCGAGACTTCACCGTAGCTTGATTTTTGCCGCCAATAACAAAATTAAAACATGGTTCATTATTCCTTCCGAAGATTTATGAACTTCTTGAATGAAATCTATTTTCTGAAGGAAATCCACCTGATGAGTTTTAGAGTTGCCATGCATAGGGTTGGTATGTCCCTTCCTTTTCTTTGGAGGAGCATCTTAGCATTTCAGGGGGACAGACAGAGCTGGAGAGTTCAGTGTGGACAGCAAGGTGTGTCTATAAAATTCCCATCAGCATTAAACTCTGAAATTTACAATGAACAGCCTTCACATTGGTGCTAAATTGGGTAGACATCCTGCTGCTTTCTGAGTCCGTGAGCAAAATATATCTCAGATCTAGTGCAATTAGGCAGGAGGGTGTTGGGAGTCAGAAACAGCCCACGATGGTATTTCTCTGTACTCCCAGTTCACACCGACTTAAGTGGAAATGATGCCACAATGAGACCAGAAAGAGAAGTCTCCGTAAGATATCCCTACAAAGTCACCTTTCTGATAAAAAAGAGAATGAAAGTGAGGTATCTAAAATAAGCCTAGAATCTCATATGCAGCTCAGCTTCTAAGGGGAACTCTTTCTCCCTCGTGTCCTTAAATAGTACTAGAATCTCACACAGCCTGACTTTTGAAGGTGGGCTTCACTACAGCGCAGAATGGAGAGTGAACTAACCACCGAGACTGTCTCCTGACTCAGCTTTTTCAGAAGTGTTACGTTCCATCTATGCTGACTGCAGTGCTGTTTACTACTGGGAACATACAAACAAAACCTGCTGTTTATACAGTCACTTTTTCTAGTGTTTTCCTTTGCTTATATGATACCAAGTCTGTTCATAAGTTCTGAAGATAAATTATGTGAAATCATATTTTGGCATATGATTGAGGGTGGAGAATGAATTCTTTACAGTCTTTTTTGGATGATCCCATTTGTACCACAGAAACATTTTGGATATTGTTATATATGAATATATAAATTTTTCTTGTTTATTTTGCATTAAAATAAAGCTTTATTCAGTCAG EMBV3_03097 CACGCCCAGCTCCCCGAGACCTGAGGCAGGGATGGTGCTCTGGGGCTGTCGCTGGAAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41723 GTCCCGCCCAAGCTTGCTGGTCACTGGGAGGTGGCCTTGTACAAGTCGGTGCCAACGCGC Variant GeneID:505332|PISD:NM_001024475:50_cdna 313^478 1 EMBV3_03748 GeneID:505332 17 GENE PISD MGC179415 phosphatidylserine decarboxylase EMBV3_29951 TTGCAATCAATTACACTGGTGCCAGCATGAACCCCGCCCGATCCTTTGGACCTGCAGTTA Gene GeneID:281008|AQP4:NM_181003:4_cdna UTR3_Alt 3 NULL GeneID:281008 24 GENE AQP4 NULL aquaporin 4 EMBV3_35719 CCTAAGAGATGTCCTCTAGGCTTGGCTCTAGGGCTCCAGTGATGAAATGGCAGATGATAG Gene GeneID:512144|VPS53:XM_002695680:210_cdna Constitutive 0 NULL GeneID:512144 19 GENE VPS53 NULL vacuolar protein sorting 53 homolog (S. cerevisiae) EMBV3_30131 CACAGCTTCATTGCAGGACTTTGTGGCTGTTTCTCTGATTAGAAGCTTCCATTGCTACTC Gene GeneID:509327|TAF7:NM_001046028:214_cdna Constitutive 0 NULL GeneID:509327 7 GENE TAF7 MGC128346 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa EMBV3_33154 TTGGACCTGGCAGACACATTGTACACCAAGATGAAGCCCAGGAAGCAGAAGCTATTCAGA Variant GeneID:512257|ZMYND12:XM_002686450:461_cdna 783^894 1 EMBV3_21032 GeneID:512257 3 GENE ZMYND12 MGC133869 zinc finger, MYND-type containing 12 EMBV3_06813 CAGTTCCCTCAGCACAGCTTTCCAGACACTACCCAGTGCTGCCAGGGCCAGTAACTGCCT Gene GeneID:506040|STRN4:XM_002695181:839_cdna Constitutive 1 NULL GeneID:506040 18 GENE STRN4 NULL striatin, calmodulin binding protein 4 EMBV3_43130 TCCTGACCCTCAGAAAACCACTAAGAAGAAAACCAAAGTGGCCCGGAAAACCTGCAACCC Gene GeneID:537396|PIK3C2B:XM_002693882:180_cdna Constitutive 0 NULL GeneID:537396 16 GENE PIK3C2B NULL phosphoinositide-3-kinase, class 2, beta polypeptide EMBV3_06490 TCCACATCAAGGCACTGAGAGTGTTTGTGGAGTCTGTGCTCAGGTATGGATTGCCAGTGA Gene GeneID:508327|ATP6V1C2:NM_001083653:78_cdna Constitutive 0 NULL GeneID:508327 11 GENE ATP6V1C2 MGC151808 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 EMBV3_00104 TTCGGGGTTCTGCCACTCCCTGAGGCCGGGGGCTTTCGTCCCCGCCATGGCTGAGCTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01574 CAGCCTGTTTGTCGGCCTGGTGATTCTCTACATCATCTGCTGCCTTCTGTCACCCTACAT Gene GeneID:100141222|LOC100141222:XM_002707748:127_cdna Constitutive 0 NULL GeneID:100141222 18 GENE LOC100141222 NULL similar to Uncharacterized protein C19orf15 EMBV3_18908 GCTGGATCATCTCAACAAGGGATCTGTGAACAAGGTCATGGGTATTCCTAGCCTCAACTT Gene GeneID:515053|C1H21orf62:NM_001163694:31_cdna Constitutive 0 NULL GeneID:515053 1 GENE C1H21orf62 NULL chromosome 21 open reading frame 62 ortholog EMBV3_23280 GGGCTGCTGGTCTTCCCCTACACACACCAGGATGATCCTCAGTGTCCTCACGGGCCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10912 ACAGTCATCGCCCACACTGCCACCACCCACGCCTCAGTCATCCAGACTGTGAACCACGTT Gene GeneID:618576|MNT:XM_002695690:259_cdna Constitutive 0 NULL GeneID:618576 19 GENE MNT NULL MAX binding protein EMBV3_42134 AAAAAACCTGAAACACCTCTACCACAGCCTCCGCCCCAGGTGAAAAAGCCAAAACCACCC Gene GeneID:100125949|LOC100125949:NM_001105512:8_cdna Constitutive 0 NULL GeneID:100125949 22 GENE LOC100125949 MGC148353 hypothetical LOC100125949 EMBV3_37044 AAACAAAGATCCTATTCTTAACGGCAAAGAAGCCAGCCTTGGGGCTGAGCAGGATGGCTC Gene GeneID:515476|ORC6L:NM_001046201:249_cdna Constitutive 2 NULL GeneID:515476 18 GENE ORC6L MGC128736 origin recognition complex, subunit 6 like (yeast) EMBV3_22936 GATTCCTAAGTTGTAGGGTGTACCTCGCAGGGTTTCACGCTGACCACCGCCAGCCAGGAA Gene GeneID:352958|CTSC:NM_001033617:5_cdna Constitutive 0 NULL GeneID:352958 29 GENE CTSC MGC126959 cathepsin C EMBV3_42476 TTCTACAAGGCTGGACAAGTACAGTGAGCCCTCTCCAGGCCGACAGCCAGTGGAATGCTT Gene BVT0102_231352 - 0 NULL GK000013.2:70737855-71326364 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28318 CTCCCGGCTCGACTGGCGGCGCGCGCGGCGTTGCCGTGCAGACCGTCTACGTGCAGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40958 GTTCGTAGACCGGTCAGGCCAACGGATTCCGGGGCCTGCGAAGCGTCCTTGGCGTGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11526 GCTCTTCCCAAGTGCCACCGATGCTACAAGAAACAGATAAATCCAAGTCAAATACTAAGC Gene GeneID:509788|MTDH:NM_001046038:27_cdna UTR3_Alt 3 NULL GeneID:509788 14 GENE MTDH MGC137491 metadherin EMBV3_06355 CCTATAAGTAATGGAACACCAAGTCCTGGGAGACAAGGAGGAACACCCACTGACACCATC Gene BVT0102_116747 + 0 NULL GK000001.2:73022686-73416456 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001178 TCONS_00001179 TCONS_00003996 2 XLOC_000268 XLOC_000951 NonCoding TCONS_00001179 XLOC_000268 NonCoding NonCoding - 1:73239450-73242414 - TSS576 1446 3 TCONS_00001179_2 66 0.0968188105117566 2 0.512656091798853 0.00508041108925179 0.00870009027785562 0.00730552917211853 0.00563688602858624 0.0021184928865296 0.00177227717177853 0.00197802586233611 0.00296185783855957 0.00278050323464319 0.000360058573047102 2.3254875496551e-05 0.000129414708789 0.000666358540165567 0.00253528924734041 0.00354178488011116 0 0 0 0.00269264365887683 0.0100334007088506 0.00188270040984028 0 0 0 0.0056536607847142 0.00511020927801593 0.0017338053358078 0.000212561886524452 0.000184648928742504 8.31521995382495e-06 0 noncoding 0 0 0 0 -0.752558963275136 0.0809707565431117 0.0124710082145769 0.812551285993821 AGCACAGATTACTTTTCCCTTGACTGGGGAAGGGAGGGAGCAGGTTGGAGCTTGTCCTTTTTGCTCTGAGCCCTCCGGGGGTGCCACCAGGTGCAGCTGTCCCTACCGGGTGGAGACGAGCAGGGCCCCCTTCACCTTGGAGGGCTGGGAAGTATTCAAAACTCCACTGATGGCAGCTGGAAAAAACACATGTGCAGCCCTGAACAAGTCACCTCAGCCTCCTGGGCCTGCCTTCTCATCAATAGAAAGGAGGTGATATTGGTAAGTAATTGAAGTGAGAATTCATGAAGGGAGTTTTGCAGAGGGCTTGGAAGAGTGAGGGACGGAACATAATTGCATAAAGGCATTGTGGGCAGGGGCAGGTACCAGAGTCCAGAGGTGCTGAGATTTTTCCCAGGGGCCACGGTGGAGAAGTAAAATGTGATGGCAGGGCCACAGCCAGAGTCAGGGCCTGCGGGCTGGCGCACTGATAACCGAGGCCTTGGCTGGAGCGGCGGATGGTGTCAGTGGGTGTTCCTCCTTGTCTCCCAGGACTTGGTGTTCCATTACTTATAAGTAACTGAATTAGGCAATAAAATAAGCAAGTTCAAGTCTTAGCATTTCTCAGGAGAGAGATTCACTTTTGTGGTTGAAGCTCCCAGCCCTCTGTGGCTTTTACCCAGCATTTCATGGCTTTATTCAGCTTCTATCAAACCCAGCTGCTGGCTCCTTTTTCCAGTGTCCCTGTCCCAGGCCTGGAATTCCATTTTGAATTCCTGGGTGAGGCAGCCAGCACACCAGCGACAGACAGTGGTTCATTTGGAAAAGATCTGATCTGGTCCACCACCATCCTCCTGCCCCTGGGACTCAGATTTGGGTTTGGTGGGTAGAAATGTTTCCCTAAGCCTGAATGGACAAATAGACACAGGCTGACTGACTCGAAGCTTTTCTAGGTGACCACTTGGTTCTAATAGCAAAGACTGATGCCTGGAGAATTATTGGAGCTCTGCGTCAGAGGTGACCCCAAACTTCATGGAGCTTGACTCCTGTTCTGTTTTCTGTCCTCTTCCCAGCAAGTGGTTGTCAAGCTTCTCCTTGGATGTCTTCACTGATAGAGAACTCCCTACATCTCTAGGCCAGCTCAGATGGAGGTGGCAGCTTTCCAGTGTTTTCACAGCCAGACCCTAACTGCTCCAGCAGAAACCCCCTACCATGGAAATCAAAATTTGAGAACTAGGATCACCTGCTCAGTGAATCCCAAGCCAGGGGCTCAGCAGTCAGGTCATATGCATCAGCTCTGAGGGGTCCTTGGAGATGAGCTGGTCTGACTGCCTTATTTTATGGAGATGGATGCAGGCCCCCTAAGAAGCATTATTGGTGGTAGTTCCTCTCTCCTTCTAATGACAGCTGACAGCAGTTGAGCATTTATTCTGTTCAGGAGCACTGATGAATGCTTGCAGCTGCATA TCONS_00001148 TCONS_00001149 TCONS_00001150 TCONS_00001151 TCONS_00001152 TCONS_00001154 TCONS_00001157 TCONS_00001158 TCONS_00001160 TCONS_00001164 TCONS_00001165 TCONS_00001168 TCONS_00001169 TCONS_00001170 s 3' 132234 TCONS_00001148 TCONS_00001149 TCONS_00001150 TCONS_00001151 TCONS_00001152 TCONS_00001154 TCONS_00001157 TCONS_00001158 TCONS_00001160 TCONS_00001164 TCONS_00001165 TCONS_00001168 TCONS_00001169 TCONS_00001170 s 3' 132234 EMBV3_08257 GAAAAGCCGCCCTGAGACTGTGGGGCAGAAGAGGAAAAGAACAGAGGAAGCAAAGGACCT Gene GeneID:508336|CCDC71:NM_001046000:115_cdna Constitutive 1 NULL GeneID:508336 22 GENE CCDC71 MGC137942 coiled-coil domain containing 71 EMBV3_11011 CGCCCCGAACCAGACAGAAATACAAAAAGGAAACTCACACGTGATGCAAGTGATGTGGCG Gene GeneID:532359|FOXK2:XM_002696128:244_cdna UTR3_Alt 2 NULL GeneID:532359 19 GENE FOXK2 NULL forkhead box K2 EMBV3_39727 CCCAGTGACTTCCAGCTCACGGACAAGGAGGCTGCCTTGGGGACACGCAGTTCAGTTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07672 AATGGAGAGCTGGAACACATCCGGCCCAAGGGCCTGCTTCCTCGGGGCCAGCACCCCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09255 TCAGAAAACTGGTCACCGTCAGCACCTGAAAGTAAAAGTGCGTGGTCTCCTGAACTCTTC Gene GeneID:618360|LOC618360:XM_002699055:56_cdna Constitutive 0 NULL GeneID:618360 29 GENE LOC618360 NULL similar to Nitric oxide-inducible gene protein EMBV3_13419 TGGTAAATTGGTGGCTGAAGAAGCTCATAGAAAAGGCTATTTGCGGTACGTGCACTCCAG Gene GeneID:526436|ABCD2:NM_001099037:4_cdna Constitutive 0 NULL GeneID:526436 5 GENE ABCD2 MGC166322 ATP-binding cassette, sub-family D (ALD), member 2 EMBV3_22874 CCAGCTGGTAAAAATCACAGAAAAGGGAAAGGGAGCAGATACCTTGTTTAGGCTCTGGAA Gene BVV0102_027267 + 0 NULL GK000005.2:112513887-112564967 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196516 TCONS_00196515 TCONS_00196513 TCONS_00196514 TCONS_00196512 1 XLOC_118358 Coding TCONS_00196513 XLOC_118358 NonCoding Coding SLC25A17 5:112564046-112571370 j TSS146219 1992 1 TCONS_00196513_3 69 0.0707831325301205 3 0.728390004096682 0.00733025565051623 0.00799431607343972 0.00859745382580625 0.00647016046926027 0.00404824042021073 0.00249569925104963 0.00467765624093611 0.00356910037354473 0.00801878417912128 0.000346045204858575 7.36661602127364e-05 7.33356477378406e-05 0.00157151191119999 0.00239409862279969 0.00232957045787738 1.0247982509468e-15 3.15644916332831e-11 2.64671772965177e-20 0.00806189627868569 0.00974088252039257 0.00293561688065773 1.45185664083636e-16 1.1946641938459e-20 2.17784890133714e-14 0.00692210768202465 0.00648594222318807 0.00408740024669492 4.80544817216441e-05 3.42743891867938e-05 7.55813240414811e-21 NM_001045948.2 SLC25A17 Bos taurus solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 (SLC25A17), mRNA. 0.0 1608 99.89 0.448293172690763 XM_005261306.1 SLC25A17 PREDICTED: Homo sapiens solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 (SLC25A17), transcript variant X1, mRNA. 0.0 798 73.05 0.701305220883534 0 noncoding 1 1 1 1 -2.43694849063163 0.0289560495437588 -0.80289394250832 0.00412347919351012 GAGGAGAGAGCGAACAAGTAAATCAGCATAAATAAGTAACTGCAGGTTGAGGAAGGAGCTATCAAGGAAGTAAGCCACATTCTGTGATTTAGTGGAGAGGGCCACAGTGGGGGTCTTCTAAGATGGCACGATTGGGGTGGGTCCTCTGAGGAGCCCTGTGTAAATCAAGACTTAAAGGAAGTTTGGACGTCACAGACTCAACCCAGAAAACAGAACACTGGGGAGTCTTCGGAACATTCTCTATCTCCTTCACCAGCGAGTAAGGCGTTTTGGAATTGCGGGACTCTACAAAGGCCTTGAAGCCAAGCTGCTGCAGACAGTCCTGACTGCTGCTCTCATGTTCCTCGTTTACGAGAAACTGATGGCTGCCACCTTCATGGTCATGGGGCTGAAGAGCACGCGCAAGCACTGAGGCACCTCTCAGCCCCCGGCGCTCAGAAGTGCTCCAGACGGGGGGCGTGCGTGATTCCACTGTACTTGCCCCTTCCTCTGAGAAGTCTACCCTCATTGGCTTGAGATACATCCAGGGTTGTAGCCAGCTTGACTCATTACCAACTTAACTCTTTTGATGGTTGGTTGAGTTTTGTGGAGGAGGTTGGACCAATGGCCATATGAAAAGAACACATGATCGAAAACCTAAAAATGAAACTTGATGGGGATTTATTGATTTTCCTGAAGGGAATGGACTATTGCTCTCATGTATAATCTTCTCCAGTTAAAGTCTTTTTGAAATTTACCAGCTATTCTCTTTCCCTGAACCACCCCCCGGCTCCAGGTTCTACAGCCGATTTGCTACCATGTAATTCTCTTGGTATTCTCCTCCTATATACTTTTGCACGTCTCCATCTTGGTATTTTCCTCACTAAAAATGTTATGACTATGCCACAGGCATGCCTATTATTCTTGAGCTTTTTTTCTCCTGATTCAGGAAAGATATCTTCTTTAGTGTGTGAGCTATTTATTTTGTGGGGGAAATGAAAATGATTAATTCCAAATGATTCTCTTATAAACTGTAAGCATCACTTATTCTTTCGTATCTGACATAATTAAAAAATATTTATTTTGAATCAACCTTTTCACTACAGAATTTGAGGTTTTGTGTTCATCCATATGGGCCCCAGTAAATTGTAAGCACAAAAGCGATTCTTCAAATTTGCCCTTTAGAGTATTACATTGGGTTTACAACCAGCTGGTAAAAATCACAGAAAAGGGAAAGGGAGCAGATACCTTGTTTAGGCTCTGGAATACTGTCTTCTTTTGTAAACTCATGGTAGAGGCTGTATATTTTGAGAATAAACTTCTGGTTAAGGTTATTTCTGTTTGAAAATGTTGCTTAGAGTCCTGCTACTCAAAGTGTGGATCCCAAACAGTAGCATCAATATCACCTTGGGAGCTTGTTGGACATGCCATCCCAGACTTTCTGAATCATCTTCTGTGTTTTAACAAGATACTCACGTGATCTGTACTCATCAAAGTTCAAGAGAACTTAGAGCTCCTGACTCCACCGAAGATGCAGTTGGTTTCAATTATGGAAACCAAACATCGATATCGAAGGAAAGGTAGAGTAATGTATTATATTAGAGCATCCTGTGAAAAGACCAGAAGTTCTGTCATCATTTACGTTCACCTCACAGCACATGTTCAGGTTGGTAGGACTTTCATTATGTGGTCAACAATGAATTTTGACGTCTCAAGGCACTCAAGAAGCAAACCCTCTTGACATGAGTAGAACAGCAGCTTTTTTAGACCTTATTTTAGCCCCTATATCAAAATGACAGGTTTTTCATTTATAAGTCTTATTCAGTCAATTAAAGTAATAATGAAGTGTCTGTGTCTATTCTATACTAGTATTTAAGTTCAATTTTGAGAGTGGAAATTTATTTTCTCTCATCCTGGTGGTAATTTCAAAATACATGATTATTAGACTAGTAATAATCAAAAGATCATTGTGTTGTTCTAGAAAACAAAACCTAAGAGGAACTCGTAATCAGA EMBV3_08441 CCCATTGACCTGGACGAGTGGTGGGCACAGCAGGCGCCAGCCACACCTGAAGTGCCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40351 GGCAGCTAGGTCCTGCACTTATTAACCCCACTCCCCACTTATCCTGGGGCATACACTATT Gene GeneID:767601|BCL2L2:NM_001076533:278_cdna UTR3_Alt 2 NULL GeneID:767601 10 GENE BCL2L2 NULL BCL2-like 2 EMBV3_17026 CCATACCGGGAGATGGAGCATTTGAGACAGGTACCTGTTTCCTAGGCAACTGCTGATCCG Variant GeneID:514595|LETMD1:NM_001083430:71_cdna 404^486 1 EMBV3_35855 GeneID:514595 5 GENE LETMD1 MGC148411 LETM1 domain containing 1 EMBV3_38633 CTCTGGGGCTTTGGGCTGACATTGCATTTGACTTTTTATATAGTGCCAGGGCAAAGATGG Gene GeneID:100137875|LOC100137875:XM_002685670:446_cdna UTR3_Alt 1 NULL GeneID:100137875 2 GENE LOC100137875 NULL similar to MGC127538 protein EMBV3_24272 CTGAGCCCTCTGGATTAATGAGATACACTAATTCAATTCAGAGGAGCAAAACTTCATAGC Gene BVT0102_012975 + 0 NULL GK000003.2:38699156-38838086 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23568 CCTCACAGTGGCCGTGGGGCCCTTGGGAAGATTTTATTGTCAAGACATTCGAGCCTATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23224 TTCCTTCAATGCCAGCCAAGGGAGTTTGGCCATTGGTTCTGTCACATGGTACCGGGACAA Gene GeneID:513769|NCR3:NM_001040524:102_cdna Constitutive 0 NULL GeneID:513769 23 GENE NCR3 MGC133750 natural cytotoxicity triggering receptor 3 EMBV3_21981 GTTCTTAACTGGTAGGTATCATTTTTGGTTTCCTTTGTTCCCTGGGTTAATCCACTGTAC Gene BVT0102_134637 - 1 EMBV3_17763 GK000030.2:47828192-48002300 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16917 CTTCCCTGTTTCACCTAAGTCTTTCTGGCAGAGGGCTCTATTTATGGTCAGCACCAGGGT Gene BVV0102_029951 + 0 NULL GK000010.2:19300707-19317483 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012898 TCONS_00012905 TCONS_00012901 TCONS_00012906 TCONS_00012900 TCONS_00012903 TCONS_00012899 TCONS_00012904 TCONS_00012908 1 XLOC_007949 Coding TCONS_00012908 XLOC_007949 Coding Coding ARIH1 10:19235654-19303996 j TSS9682 5356 1 TCONS_00012908_3 412 14 0.921833160182028 0.00117336947383386 0.00401709909317288 0.00469928394454542 0.00383003150405029 0.00453531316803742 0.00299663626219817 0.000294470425178612 0.000100171616080522 0.00505836276501082 0.000823875365618169 9.60151146259409e-08 0.000750972389915397 0.00154551004542485 0.00375491250443992 0.00204033751442602 0.00394173975118358 0.00524190416416409 0.00521475707016355 0.00670438903268094 0.00505947297421206 0.00212358569717731 0.00169686814802005 0.00207105027678917 0.00383054057333764 0.00955746058935152 0.00449050761902836 0.00378485241587971 0.000347813589446395 0.000382839818692006 0.000669420704755869 XM_005211286.1 ARIH1 PREDICTED: Bos taurus ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) (ARIH1), transcript variant X1, 0.0 8208 100.00 0.849514563106796 XM_005254278.1 ARIH1 PREDICTED: Homo sapiens ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) (ARIH1), transcript 0.0 5990 89.35 0.851008215085885 TCONS_00012908_3 sp|A2VEA3|ARI1_BOVIN ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1; 0.0 872 100.00 0.997572815533981 2 coding 0 0 0 0 -0.314232594310691 0.144429977323499 -0.135100844379047 0.0381865259027303 GGCAGACACTTCACCGTTTGAGCCACCCGGGAAGCCCTCTTAAGGAGAATCCAGCAACTATCACAAGAATACTCCTTAGCCACTTCAATTGGGATAAAGAGAAGCTAATGGAAAGGTACTTTGATGGAAACCTGGAGAAGCTCTTTGCTGAGTGTCATGTAATTAATCCAAGTAAAAAGTCTCGAACACGCCAGATGAATACAAGGTCATCAGCACAGGATATGCCTTGTCAGATCTGCTACTTGAACTACCCTAACTCGTATTTCACTGGCCTTGAATGTGGACATAAGTTTTGTATGCAGTGCTGGAGTGAATATTTAACTACCAAAATAATGGAAGAAGGCATGGGACAGACTATTTCGTGTCCTGCTCATGGTTGTGATATCTTAGTGGATGACAACACAGTTATGCGCCTGATCACAGATTCAAAAGTTAAATTAAAGTATCAGCATTTAATAACAAATAGCTTTGTAGAGTGCAATCGACTGTTAAAGTGGTGTCCTGCCCCAGACTGCCACCACGTTGTTAAAGTTCAGTATCCTGATGCTAAACCTGTTCGCTGCAAATGTGGGCGCCAGTTTTGCTTTAACTGTGGAGAAAATTGGCATGACCCTGTTAAATGTAAGTGGTTGAAGAAGTGGATTAAAAAGTGTGATGATGACAGTGAAACCTCTAATTGGATTGCAGCCAACACAAAGGAATGTCCCAAATGCCATGTCACAATTGAGAAGGATGGCGGTTGTAATCACATGGTCTGTCGTAACCAGAACTGTAAAGCAGAGTTTTGCTGGGTGTGTCTTGGCCCTTGGGAACCACATGGATCTGCCTGGTACAACTGTAACCGCTATAATGAGGATGATGCAAAGGCAGCAAGAGACGCACAGGAGAGATCTAGGGCAGCCCTGCAGAGGTACCTGTTCTACTGTAATCGCTATATGAACCACATGCAGAGTCTCCGCTTTGAGCACAAACTATATGCTCAGGTGAAACAGAAAATGGAAGAGATGCAACAGCACAACATGTCCTGGATTGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGTGCCACACTCATGTACACTTATGTCTTCGCTTTCTACCTCAAAAAGAATAACCAGTCCATTATCTTTGAGAATAACCAAGCAGATCTAGAGAATGCCACAGAGGTGCTCTCGGGTTACCTCGAACGAGATATTTCCCAAGACTCTCTGCAGGATATAAAGCAGAAAGTACAAGATAAGTACAGATACTGTGAGAGTCGACGAAGGGTTTTGTTACAGCATGTGCATGAAGGCTATGAAAAAGATCTGTGGGAGTACATTGAGGACTGAGAATGGCCCTGCATAAAATGAACTCTGAAAACTTTACCATCTAGAGTGCTCATGCAATTAAAACAAACAAAACAAACACAAACAAGGAGGCACTAAGCCTATTCTGACACCGCTGGTCTGTAGTACCAGAATTCTGTTTTGTTAACGGAAAGTTTAAGTAAATTATATTGTAATAAAAAAAAAAGGTAGATAAACCATTGTACAACAGTATTCTAGGCCGCCAACAAAAGTGTGACAGACACACTAAAAGCCCTCCAACTTTAACTTGTAACGTAGCTTCATTCTCCAAGCTGACTCCTTTTTTTTTTCATTTTCTTTTTCCTGAGTGTAGTACAGTTAAAATTTAAAACTGCTCCTTGACACTGCTTTTCATGTCCAAACCAGCCATTTTGTTGTACTTTGGTAAAGGACCTCTCCCGTTTCTCCCCGACACATACAGATATACCCACACACACAGACTGTCTCTCTCTCATACCCCAAGGTCATGAGTGAATAATGATTAGTTCCTTGTAAAGAAAATTCTTGGGGCGGGGAAGAGGGTAGGCAGAAAGAGGAATTAAAAAAAAAACAAAAAAAACTTTGTATATGACTTTTAAAACAAGAGGACAACACAGTATTTTTCAAAATTGTATATAGTGCATATGCATGGACAAAGCAAGCGTGGCACGTGTTTGCATAATGTTTAATTACAAAAAATATTTATTCTTTAAAAATCTTCAAGATTATGTCTATTTGCTGTGCATTTTCTTTCAGTTTGCTTTATCTTTCCAGGGCTGAGGGTTGGGATAAAAGGTGTGTTGGTTTAGCACCTCTGGAAGACCTAACTAGAGTTCTTTGATTTCCCTTTCCTGAAATTACTTTGCCCTCTCTGGTTTTGATGTATTTGTTGCTGGCCCTGGGTCTCATGCCCAGAATTGCCAGCTCCTGGTCGAGCACAGAGAGGTCAAGCTCTGACTAAATGCCGTGGCCTGATAAGGGCTGCAACAGGGAGCTTTGTTGCTGCCATTGAAGAATGACCCAGTCTCCAACCTCATCCCTCTCAGCAGCCTCATACATTTACGTAAGCCTTTGTGGGCCCGTGTCATACACACAGCTGAAGGCTTCCTAGGCTTCCTGTCACATCCAGAGGACACATTTCAAAAATTTGTCCCTTTAATTGCTGCTTTGAGCCTTTTAAGATTTTAGTTATGGCTCTTCTCTCACCCCTTCTTTATGTTAGGGTGTCAAATAGGACGTTTTTGCTTTAAATATAAATATAAATAAATAGCCATTCACTTAGATTCAGATTGTGAATTAAAAATGGCAGATACTGAAATTGCTTGTGTGTGTTGCTGTGGGTTCAGTTTGAAGGCAAACATCCTAGAACTTGATATTCCCATCTAGTGCATTTAAATAGAAATCTTTGCTTCTTTTCTATTTGTCAACAGATAGGAGAATTAATAAGGCGTTTTAGCTGTGATGTCCATTTTTATGAAATTTCTACTAAGAGCTATGTTAAAAGTAAAGGATGGTGGTGGTTTTATTAACTATGTATCTGTTTAGGCCATTCTGGCTGTGGTATTTTTCATCCCTAAATCTGTCAGTTTTATACAGGAGTACAGAGTGAACTAGGCAACTAGATGAGGTCTTAATACTAAATACCACTTCTGGCTGAAGGACCTCTTTGTCTTCCTCTAAATGTCTTGCGCCTAGGGAGTGTTTACCTTTTGTGAGGCAGCTCTGTCTGCTCTTGCACCGTACATCTTACTACTCCATTGGGAAGTAGTTTCACTTTCCTCTGGCCTTTTGCCTAAGTTAGGCTTTGCTAAATCAACCCTACTTTTCCTTTTAGAAAAGGTTGTTACATGAGATGTACTTGCAACTGTTCTTTTCCCATCAGAAATCAGTGAATGTTTGCTGAGTATATTATGCTGCTTCCTTAAACCACTTGTCGCTCTAGGATCAACTTTATCTATACCTTTTATCCTCCCCTCCCTTGCCACCTCAGGTGCAAATCTGAACTCAGTGTCTGCTTCTTCCTTATTCTCTTCTCCTTCCTTTTCCCTGTCAAACATTTGATTTTATTTTAAATGACTGCATCAATCTTAAAAGACATTTATCAAAACTAAGGATTTTTTTTTTTAAGAAAGCTTGAATAAGTTCCTTTCCTTGGTAACTTTGAAAAGCAGCCAGAGTTGCTATCTAGATATATGTGGCCCCCTTAAAATGTTTTGTGTATATGTGGTGTTTTAAGAAATATCTTACATGGTTAACTACAGTATCTAGATTTCAGTGTCATAAACCCTTTTTACACGCTCCCCTTACAAGAGGTATCCAGAAACAGTGTGTGCACTTCATAATAACAGCCCCCACCCATGGAAGAACAGTGCTTTTTAGAGCTGTTTTCTAGTTTCAGTGTTGGCATATTACCTGAGGGTATTGCAGTTGTGGGTGCATTCCCTAATATGTATGGATCAAGATGAATTGGCCTTTTCCATTTCAAGCTTTTAACAACTATCTCCATATCTGACAGAATTCCCATCAGTTAATCACTTTCATTGTCAGTAAGTAACTTCAGTGATCTCAGCTGGGCTAGGTCTTAAGCCAAATGATATGATGGCTTCCCTGTTTCACCTAAGTCTTTCTGGCAGAGGGCTCTATTCATGGTCAGCACCAGGGTCTCCCTTGTCTTTTTGAGGTCTTCTGAAAACTGCATGCATCATTTGAACAATTCATTGAGCAGTAGATGGACTTAAATAATTTACAATAAAATTGTTGATCCAAAGCGCAGGACTACAAACCACAGTGGTAAAATTGAGTAGCATATATCATTAGACTCTAAATTCTATGTAATCCGCTGCAACCCAGATTGTATGTTTTATGTGTGTTTAAATAAATACATTAAATACACGTGTATACATACACACAAATACAGCAGATCCAAGACTGACTGACTTGATTTGAAATGGTTGAATCTGCAGTGTAAAATGTGGATCAGCCATGATTAGGAACTGAAATTTAGCATAAGAGAGAAAAGGACTTGATGTACAAAAATCCCGGTATAGAGCACTTGGGGGATGGGAGGGGGCGGGTTGGTGAGACAATCAGATCGGTAAATTGATTAAATGCTCCTAACCCTGTAATTTTGTGCGTAGAGCACACTGTGCTGTGGAAATAACTGTTCTTAGATTTTCATTGTAACTGGACTGTTCAGGTTGCCCAGAGGGAAAGAACATTCCTAATTCTAATAAAATAAACTTTTATTTTGTTATTCCATTAGTTACTTATGTTTATTTTTATATTAAGAAAAAGACATTGGTGGCCTAAGAGTCACCTATATTATGTGCCTTATTCACTGTTCCTACTTAACATAAAATGTCAAGATTTGGTTCAGTTTCTTTGCAGGGAACTGTGAATGAGACTCTCCCCAACAATCAACTTGGTTAATGAAGCCTTCAGAGCATTTTCTGGAAGCTTTCCAAGTTCTGTGTCTTGAACATTGAATTTAGGTTGCTATTCGTTTTATAAGAGTGATATTAGATGCCCAGTAGATCTTTGTCAGTTTATAGACATAAATTTAAAAGTCATTCTCAAACTTGAAACTCCGTCACATTACTTCCACTTGGTTCACTTTTAGAAGCTGATATCTCCTACCAAAATGAGGGGAGAGTTGTCTTAAAGAAGGTCCCAAGTTGAGATCTTTGTCATTAATATTCAAGGCCAGAATTTAGGACAGTTTAATTTGGTCTTATTTGGATTTATAATTACCAGAGTTCATTTATCACTTAATATCTTCAGAACACTTTAACTTCTATCATTATCTAAAAGAAAGATAAGGTTACTCAACAAGATTAAGCAACTAGTCCAAGATCTCACAGTTTCTCCTATCGAACTTAAGCTTTATTCTTTCTGAGCAGCATCATGCTACCTCTTTGTATCATATTTTGTTAATCTGGTTTCAGAATGACGTGGCATTTGATACGAAAGGTGGTTCTTATCTAATCTGTAGTGTACTGAACCTATCAAAGACT EMBV3_06897 GGCTGACTGAACAGGTGTGGTAAGTGGATCGTTGTTGTTTAGACACACTGAGTCCTATCC Gene BVT0102_410214 + 0 NULL GK000018.2:65264673-65278552 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091951 1 XLOC_056720 NonCoding TCONS_00091951 XLOC_056720 NonCoding NonCoding - 18:65275297-65276003 - TSS69297 706 1 TCONS_00091951_1 87 0.400849858356941 1 0 0 0 0 0 0 0 0 0 0 0.00103153411249538 1.29699056849357e-05 2.02588212600612e-05 0.000231656081167077 0.000499715673629264 8.33916017856144e-05 0 0 0 0 0 0 0 1.29943970312486e-05 2.37459418723538e-05 0 0 0 1.36051196768742e-05 0.000309429469229385 0 XM_005203908.1 GOLPH3L PREDICTED: Bos taurus golgi phosphoprotein 3-like (GOLPH3L), 2e-39 167 84.87 0.213881019830028 0 noncoding 0 0 0 0 0.0346918645760428 0.751850931936883 -0.000602464645146836 0.991026809036689 AGTGGAGCAGTGGAGTCTGACCTGAGCAGATCAGCATTTTAAAAAGGCTGACTGAACAGGTGTGGTAAGTGGATCGTTGTTGTTTAGACACACTGAGTCCTATCCAGCTGTTTTGAGACCTAGTCATCTGTAGCTTACCAGGTTCCTCTGTCCATGGAATTCTCCAAACAAGAATATTGGAGTGGGTCACCATTTTCTTCTCCAGGGGATCTTCCCAACCCAAGGATAGAACCCAAATCTCTTCTGTCTCCTGCATTGGCAGGCAGATCCTTTATCACTGAGCCAGAAGCCCTGATTAGGGGGAGGGCAAAGATGTGTTTAGTGTTCTCCTATAGGGTTTTTCCTAGAATTATCTTTGCCTCATTCATTGATGAGATCAGGGTGGCTAATCTGATCAGATCACTAGGGTTAGGTTGACACAAAGCATGATATCAGTTAACAGAAATTAATTAGGTATTTGGAAGCCCACATATTAATCCCAACAAACACCCCCACTTTCTGATCTTGTGGCATGAATTTACTTTACAAAAAAAAAAAAAAAAAAAACCCTCAAATCCAGAGACTTCCCTTGTAGTCCAGTGGTTAACACTCTGCACTTTTACTGCTGAAGGCATAGGTTCAATTCCAAGACCCATGGCGGAGCCAAAAAAATAAATGAATAGTCTTTGAAATGTCAATCGTATAGAAAAATAAAAGAAAACATCAG TCONS_00084993 . 5' 3976 TCONS_00084993 . 5' 3976 EMBV3_25009 GGCTTACAACCCTGATCGCCCTTTGAATGTGCTAAACACTGAATGACTATCCATACTGGA Gene GeneID:281127|DSC1:NM_174044:55_cdna UTR3_Alt 2 NULL GeneID:281127 24 GENE DSC1 dg3 desmocollin 1 EMBV3_40339 CTGGCATGGACAGAAAAGTCAGAGGACTTGGACCCAGGCTTTGTAGAACCAGAGGCTGTT Gene GeneID:536316|POLR1A:XM_002691362:210_cdna Constitutive 0 NULL GeneID:536316 11 GENE POLR1A NULL polymerase (RNA) I polypeptide A, 194kDa EMBV3_00796 GGAAAAAGGTTCTGGTAGTAGAAGAGGGAGAGAGTGGACCTTGAGAGTCAGCAGGCAGAC Gene BVV0102_144079 + 0 NULL GK000025.2:21574825-21587068 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144760 TCONS_00144762 TCONS_00144758 TCONS_00144761 1 XLOC_088639 Coding TCONS_00144758 XLOC_088639 Coding Coding DCTN5 25:21541006-21578035 = TSS108617 5076 1 TCONS_00144758_1 182 0.237391646966115 6 0.863076590688128 1.42535125925586e-08 1.08043407569793e-09 0.000313570877667451 7.40791142964716e-06 0.000192817763492154 1.39385815154174e-08 1.19738746481799e-09 1.77043382079312e-47 7.15727524054253e-06 1.24776295309126e-05 1.91179771166643e-20 8.97513224760779e-08 1.62564261602832e-06 1.66042657593907e-119 1.18589023287502e-11 0.000898145477204742 2.93332302522844e-08 0.00042530315992243 1.21712103599842e-08 1.51393821958957e-07 5.24325026890663e-10 0.00136864211975261 0.000124550992018695 0.000487277883556989 1.0326730986767e-08 4.03678619541183e-39 1.60139192221e-05 1.51325450465827e-09 3.29430211440063e-09 1.22769019482088e-41 NM_001024484.2 DCTN5 Bos taurus dynactin 5 (p25) (DCTN5), mRNA. 0.0 3341 99.84 0.366233254531127 NM_032486.3 DCTN5 Homo sapiens dynactin 5 (p25) (DCTN5), transcript variant 1, mRNA. 0.0 1445 77.18 0.362884160756501 TCONS_00144758_1 sp|Q9BTE1|DCTN5_HUMAN DCTN5_HUMAN Dynactin subunit 5; 5e-132 372 99.45 0.994505494505495 1 coding 0 0 0 0 0.00531126286702779 0.96949573638159 -0.0100342013698612 0.869572897003672 CAGTCAGAAAGACCGGCGGACGGACTTTGACAGGAGCCAGAGCTGGGCATAGAAGTTGGTGGTCATGGAGTTGGGCGAGCTGCTCTACAACAAGTCCGAGTACATCGAAACGGCATCTGGAAACAAAGTTAGTCGCCAGTCTGTGTTGTGTGGAAGTCAGAACATTGTTCTTAATGGCAAGACCATTGTGATGAATGACTGTATTATCCGAGGCGATCTGGCAAATGTAAGAGTTGGACGTCATTGTGTTGTAAAAAGTCGGAGTGTCATAAGGCCACCATTCAAGAAATTCAGCAAAGGCGTTGCATTTTTTCCTTTACATATTGGGGACCACGTCTTTATTGAGGAAGATTGCGTGGTCAACGCAGCTCAGATTGGCTCTTATGTTCACGTTGGCAAGAATTGTGTGATTGGGCGCCGGTGTGTGCTGAAAGACTGTTGCAAAATTCTCGACAACACAGTATTACCCCCAGAAACTGTGGTCCCACCGTTCACCATCTTCTCAGGCTGCCCAGGACTCTTCTCAGGGGAGCTCCCAGAATGTACCCAGGAGCTGATGATTGACGTCACCAAGAGCTACTACCAGAAGTTTTTGCCCTTGACACAGGTCTAATGTCTCTGCCTTGTGTCTCGAATTTGCTTGAGCTCTGAGATGAACTTGGGGACAAAGTGAGCCAGACAGCATCTACAAAGAGCTCTTGTGTCTTTGACATCTCCCACCCTCTTTATTTTTTATTTTGGTTTCATTCTTTAGAATTTCTCAGTCCTCCCAGGCTCTAAGTTCTTAAGACTTTACTAACAGAATGACTGGAGGGTTGTCTCCAAATGCTGTGCTTAAACTGTATCTATTCACTGTCACTCTGTACCATGATGTGGGGAGCACAGACTCATCTGTTCCCAGCACTCCCACCCCTTGGCCCTGCGGACAGCCGGATGGAGCAGGGCATCTGTCCCAGCGGGGAGGTTGTGTGTGGCCCGTGGCCATGAGCTGCCACAGTGAGCATCACTGTTGGCGTCCCTGCTGCTCATGCAGTTGGCCAGTTGCTACAGCTGCTTGTCATCTGCAAAAACACTGTTTGCCACTTTTCAGAGCCCAGATTCCTCTTGGCTACTAAAACTTGAAGGGAGGGTGGTTAGTATTTCTCTTCTTTCCAAAATAACCTGATCATCTTAATTCGGGGTGAATAATTAAAGACTTTCTAGCCTTCTATTCTAGGGCCTTGGCTTTCACTAAAAGCTTAGTGAAAGCATCCAGAAAGCATCCCTTAGCATCCAGATTTTATTTTTGCAAAGTCCCAGGTTTAAGTCTCCCATGTGGATGGACTAGACTGGCAGCCACTCCTTGTCTCATGGTATTTAGGGGAAGCAGTGTATGCCTTATTTCACTGGAGATGTAGCATTTTTGACACTTGCTCCTTGGCCTGGAACCATTCAAACCACACTACATTTGCCATAAACCTCACAGTTCAGACCAAAATATCTATACTTGGGCCCAATCTCATATGTACATGGGGGCCTCTTAAAATCATTCTGGGGGCATGGAACCCCAAGGAGTAGACAGAGTTGCCAGTGCTATCCATATCTTCTAGGTAATATCTCAGCCCTTCCCATTCTGCTCTAGTAGGAAGACTTAGAAGTGAAGGCCTGAAAAGGTTGGCCTTGCTCGATGCTCTAGTGCTGCTGTGAATGGGGTAGGACAGTTCAGCCTCAAAGGTTAGAATATAGCAGCAGCTGTCTTGACTTAACATCGGTCTGGGGTTTGCAAAAAGAACTGTATGTAGTCATCTTTGCTAGTTGAATGTAAGACTGCTTTCTGGTTTCTTATTTTTTATGTTTGTACATTAAAGGCGTGGCACATGAAACAAGTCATTTGAAGATGATCACTGTTCACCTCCAGCAATGGCGACCTGTCTTCCTTGGGCACCTCACTGTGTTCCCGGTGTCCTCCTACAGACTTTGTAGTCACTTGCCTACTTAGAGCTTATAAGCTGGATGTTATCGCCACTTCACTGGTGAGGATAAAAACTCAAAAATGTTAGATAACTTGGTCTACTTGGCATGGTGAAGGAGTCACACTCATGTGTTTGGCTCCACAGCCCACGTTCTTAAGCTCTGCCCCAGTGAAATGGGACAGTCCACTGCATCCTGTGTCATGCCAGCAGTCTGTGATGGTTGCAGCTTTTTGGGGAGCCATATACCCTAGCTCCTTTCTCTTTTTGGACCACCAAAAAGGAGGATCTTGGAGTTGGCAGAGCTTAGATGTGCCCTTAGCTAACCTCTTGCTCCCTAGAGAAATTTTCCAGGGCGTGTCTGATAGATTCCCTTCCAGTGCATGTTTGAATACCTCCAAAAGGAAGCTTGCCACTTGACATGACTAACTGTCCGTTTTCTTCTTTTATTTACTTACTTTATAACTGACATGATTTTTTGACTATCCATTTTGTTGATGAACAACCAAAATTAACAGAAAGTGGGGTGTTTCTTTTCCTGAGCCTTCTAAAAATCTTTAGGTAATTTGAGCTGTTGTCGCTAAGTCGCTAAGTCATGTCCAACTCTTTCGCAGCCCCGTGGACTGTAGCCCGCCAGGCTTCTCTTGTCCATGGGATTTCCCAGGCAAAAATACTGGAGGGGATTACCATTTCCTTCTCCAAAGGACCTTCTTTCTCTTCCTGACCCAGGGATTGAACCCGCATCTCCTGCATTGCAGGTGGATTCCTTACTGCTGAGCCCCTAGGGTAGCCCAAGTAATTTGAGTACACAATTCCAAAAATCCTATCCAGTTACTAAAGAAAGGACATACAATGTAATAGATTTTGCCAATCCAGAATCCAGTCCTATGCTCTACTTCCCACAGGCAACCACTCAGAATAATTTTCAGACTGTTGTACCATTAGTCTGTTCTTGACATGAACAGATACACACGTCCACACCAGCCTCTGTACTCATACGGATGCACTATCCCACATCTTTCTCCTTTTACTTAACAATATATCTTAGAGGTTGTTCCATTTTGGCACATACAAGTGATAAAAATGGCAATTGTTAACATATATGTTGTTTACCATATACCAAGTACTCTTCTGAGTTCTTTTTTTGGCTCTGCCGGGTCTCAATTGCAGCACGCATGTGGGATCCTCGGTCTTCGTTGCAGCACGTGTGGTTTTTAGTTGCAGCATGTGAACTCTCAGTTGTGGCATGTGGGATCTAGTAGTTCCTGACCGGGAATTGAACTGAGGCACTGTGCATTGGAAGCTTGGAGTCTTAGTCACTGGACCACCCAGGAAATATCCCTCTTTTGAGTTCTTTACCTTTATTGACGCCTTTAATCCTCACAGTATCTATGAGATAGGTCCAGTTTTTCTCCCTAAGGAGCAGAGATAAATTGTCCAAATTTCTACATCTACAATGGTGAATTTAGGCATTCTGGCCCTAGAGCTCATACTTTAAATCATTATGCAGAATCCTTCCATGTTCTAATAACTTTTGCAAGTGCAAGTGAAAATCACTCAGTCGTGTCCAACTCTTTGCGACCCCCTGGACTATACAGTCCATGGAATTCTCCGGGCCAGAATACTGCAGTAGGTAGCCTATCCCTTCTCCAGTGGATCTTCCCATACCAGGAATTGAACTGGGGTCTCCTACATTGCAGGTAGATTCTTTACCAATTGAGCTATCAGGAAGCACAGTACCTTTCATTGCCCCAAATGGAATCATTTGGCGAGCCTTTGCTGCACAGAAAGCATTTCAGGCAGGCAAGGAAAAGAGGGTTGGGACTGGGTATTGTTGGCCCATCTGCAAATATCTGCCATAGGCAGGAAGCCTAGTGTCCCCTCTGAGAAGATGGTCTCCTGGCCCTGGGCCCTGTTGTAGCTACAACTGTGTTCTGACTAGTTAAGTGGGAGCTGGTTTCTTGAAAGAATTGTCCTGCTTGTGGCCATTAAATGGTGTCTTACAGTTCCGTAGCACAAGTTAGCAAGCTATAAAAGAATATACAAACTAGATTAGATAAAAATCGAATTTCAACGCTTTGTTGCAAGTGGCAGAAATCCAGCTTGAATCAATTTAAGCAAAAAAGGGGTTTTATTGACTTACATAACAATCACAGAAAGGACCAGCTTGAGAAGCAATGTAGTGTGAACCCTGGGCGAGTTACTTAATCTCTCTGTGCTTTCGCATCATAGGCTATACAATGGGGATCATAGGCTGTAACAGTGGGGATCCACAGAGTTGGAATGGATTAACGGAGGTTTTTACTACCTCAGTTAATGGATTAACTGTAGTATTTACTACGTGTAAACAGTAAGGGCAATTCCTGGTGCTTAGAAGCACTCTGTAAGTGATCAGCTATCATTGTAGGGACAACCCTATCCAGAGATACAGGGCTCTTTCCTTTTATATGTTTTTCATCTTTACTTTAGTGGAGGTATAGACTGCGCTGTGGTGACAAAGAAACCATCAAAATACAGAAGACTATTTGAATATGAGAAAGAAGGTAATTTCGCTGACCTCACAGTGCAGGGATAGGCAAGTGGTGCAGCAGAGGTAGGTGGCTGGGCTCCACAATGTCATCAGGTACCCAGGCTCCTACTTTCTTGTCACATGACCACATGTAACTGCACAGGAGGCTGTAAATTTAGTGTCTAGCTGGGCAGCCAAAACTCGGAGGAAAAAGGTTCTGGTAGTAGAAGAGGGAGAGAGTGGACCTTGAGAGTCAGCAGGCAGACTCTCTAGGCCTGTGTGTTGGTTCCTTTTCTCCTGCTGCACATGGTCTTGCTCCACACATTAGGGCACATGGCAGCTGACAGACCCAGCCTTGCATCCTCCCAGCTTGGTGGCCCTGAAAGTTTTCTTTCCTCGAGTTCTAATTTGGACGTGAGTCTGAGTGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCTTGCTGCGATTCATGGGGTCGCAAAGAGTTGGACACGACTGAGCAACTGAACTGAACTGAAAGAAACTTTCTCATCGGGCTGTCATGAGCCCCCTGTGACCAAGAGTGTATGGCACTATAATTAACCTGATCTGGGTCATGACCTTTCCTCCCCT EMBV3_01904 ACAGAGGGCAGATTGATATTGCTGGGAATGGGAGTTATGGGGGTATAAGAGAAACTGATG Gene BVV0101_060323 + 0 NULL GK000002.2:74060959-74646309 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05496 ATCTATGTACCAGTGCAGTAAGCCCAAACACGACCAAAGCCACGCGGTATGCCCTGAATG Gene GeneID:509630|LOC509630:XM_002689928:67_cdna UTR3_Alt 2 NULL GeneID:509630 8 GENE LOC509630 NULL similar to without children CG5965-PB EMBV3_28345 TCGACCTGATGACCATAAGGAAGCGATACAAAGAGCGATATGGGAAGTCCCTTTTCCACG Gene GeneID:505322|ANXA10:XM_002689440:7_cdna Constitutive 0 NULL GeneID:505322 8 GENE ANXA10 NULL annexin A10 EMBV3_38356 TCTTGGATTTTCCTACAGAGGAATCTGGGGCAGAACAGTGTAAAGAGGAACCTAAGCGCT Gene GeneID:100300893|LOC100300893:XM_002690596:38_cdna Constitutive 0 NULL GeneID:100300893 10 GENE LOC100300893 NULL hypothetical protein LOC100300893 EMBV3_42530 TAGTCAGCTCTGTTGTGGAAGGAAGTCCTATGGAGAGAGATCCACCAGCTACCTACTCAG Gene GeneID:539776|NMBR:XM_002690287:5_cdna Constitutive 0 NULL GeneID:539776 9 GENE NMBR NULL neuromedin B receptor EMBV3_06678 GAAGCAATGCTTGAGGCTCCTTACAAGAAGGAGGAAAAAAAGCAAGAGCAGAAGTCGTAG Variant GeneID:508722|RBM39:XM_002692451:478_cdna 406^455 4 EMBV3_25027 GeneID:508722 13 GENE RBM39 NULL RNA binding motif protein 39 EMBV3_38317 CGATGCCAAAGAGGAGCAGCAACAGCAGCTGCGGCGCAAGATCAACAGCAGAGAGAGGAA Gene GeneID:539307|OLIG1:XM_002684580:81_cdna Constitutive 0 NULL GeneID:539307 1 GENE OLIG1 NULL oligodendrocyte transcription factor 1 EMBV3_02119 TGGCGAAGAAATGTATGTGGAAGAGTCTAAAGCCAGCAAGAGGCTGACCAAGCGTGTGCA Gene GeneID:513324|LETM1:NM_001075614:3_cdna Constitutive 0 NULL GeneID:513324 6 GENE LETM1 MGC142585 leucine zipper-EF-hand containing transmembrane protein 1 EMBV3_15674 CTTACAGGCAAACCCAGTGGAGGTGCAAAGTTACCAGCCGCCTTGGAAAGTACTCAGTGA Gene GeneID:614040|ISL1:NM_001099130:11_cdna Constitutive 0 NULL GeneID:614040 20 GENE ISL1 MGC166050 ISL LIM homeobox 1 EMBV3_15152 AGATAATAGAACTGGAAAAGGGTGGCTGCCCCTGGAAGGAGCACCTCTATCAGCTGGAGT Gene GeneID:506560|C12orf10:NM_001035038:18_cdna Constitutive 4 NULL GeneID:506560 5 GENE C12orf10 MGC134440 MYG1 protein EMBV3_13312 GCCGCCTGGATCGGAGCATCTTCCATGGGGCTATTATGTCTGTCTTCCCCATCATTATGT Gene GeneID:509065|RGSL1:XM_002694224:110_cdna Constitutive 0 NULL GeneID:509065 16 GENE RGSL1 NULL regulator of G-protein signaling like 1 EMBV3_01335 ATGGCAAAACATTCCCCTTCCAATCTGGTGCTATATGCTCTCCAGGCACCATGTGTGTGG Gene GeneID:785611|NUDT11:NM_001101296:126_cdna Constitutive 0 NULL GeneID:785611 X GENE NUDT11 NULL nudix (nucleoside diphosphate linked moiety X)-type motif 11 EMBV3_10907 GTGAGGCCATGGAACAAGGTTTACGAGACTGCTGTCGATCCATACGAATTGGAAAGATCC Gene GeneID:540851|UPRT:NM_001076245:10_cdna Constitutive 0 NULL GeneID:540851 X GENE UPRT NULL uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) EMBV3_39420 CCCGAAGAGGTACAGAGCGAGGTACAGCGCCCGTTAGGATCCTGTGGTCCCTGACAGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38345 GGAGGGGGGTGATCAGGAATGTTCACCCAAATCTAAGGATTTCTTGAGTTAGTTATCAGC Gene GeneID:534793|INPP4B:XM_002694335:65_cdna Constitutive 0 NULL GeneID:534793 17 GENE INPP4B NULL inositol polyphosphate-4-phosphatase, type II, 105kDa EMBV3_37317 GGTATACTTTTCCTGCTAAGTCAGTGGTGGCACAGGAGCCCTAACACTTGACCTTTCCCC Gene BVT0102_107947 - 0 NULL GK000010.2:81776053-81860043 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014979 TCONS_00014986 TCONS_00014976 TCONS_00014983 TCONS_00014974 TCONS_00014982 TCONS_00014980 TCONS_00014977 TCONS_00014984 TCONS_00014981 TCONS_00014975 1 XLOC_008399 Coding TCONS_00014983 XLOC_008399 Coding Coding KIAA0247 10:81724718-81803806 j TSS10686 4853 1 TCONS_00014983_4 300 6 0.938713062829542 3.23117205946973e-08 8.23514190240894e-16 0.000160316595572747 3.37728558124356e-13 7.44351176129675e-19 2.11532898636425e-23 0.00020145609356512 1.32721813670545e-13 2.11921938523351e-56 0.000289092820982868 8.95481214122479e-06 5.00897998864457e-05 4.58909786707551e-20 0.000377171128236476 2.72412483576342e-05 0.000466768112514227 0.000909935399095801 0.000777834057660688 0.00175109396995771 0.00278180859994979 0.00189190054607122 0.000207930113281756 0.000230126577583581 0.00051466057938294 0.00036279679834369 0.00266468554844477 1.68851566709225e-68 6.93438918486497e-05 7.70083351704703e-05 6.81169930023478e-05 XM_005212085.1 KIAA0247 PREDICTED: Bos taurus KIAA0247 ortholog (KIAA0247), transcript 0.0 8643 100.00 0.987224397280033 XM_005268241.1 KIAA0247 PREDICTED: Homo sapiens KIAA0247 (KIAA0247), transcript variant X1, 0.0 2004 80.11 0.450855141149804 TCONS_00014983_4 sp|Q92537|K0247_HUMAN K0247_HUMAN Uncharacterized protein KIAA0247; 0.0 526 91.75 0.996666666666667 1 coding 0 0 0 0 0.0367312608072588 0.742494895268824 0.00813606545498821 0.86164859370843 CGGAGATGGGTCTCTGACCCAGTACCTGGAACTGATGAACACGCAGCTCACGAGTAAAGATCAGGTGAATCTACCTGAGGCTGACTTCAGAGTTGTTCCTTCTGGCTTTTACATTTTTCCTTTTAAAAATAACTTGGACGGATAAAAGATGTGCCATGGCAGGATAGCACCAAAGAGCACCTCAGCGTTTGCCGTGGCCTCCGTGGGACATGGAGTGTTCCTTCCCCTGGTGATTCTTAGCACCCTCCTTGGAGACGGACTTGCCTCAGTGTGTTCCCTGCCACCGGAGCCAGAGAATGGTGGCTACATCTGCCACCCCCGGCCCTGCAGAGACCCCCTGAACTCCGGCAGCGTCATTGAGTACCTGTGTGCCGAAGGCTACATGTTGAAGGGTGACTACAAATACCTGACGTGTAAGAATGGCGAGTGGAAACCAGCCATGGAGATCAGCTGCCGTCTCAACGAGGACAAAGATATCCACACTTCGCTCGGGGTCCCCACGCTGTCCATCGTGGCTTCCACTGCCAGCTCCGTGGCGCTCATTCTCCTCCTCGTGGTGCTGTTTGTGCTGCTGCAGCCAAAGCTGAAGTCTTTCCATCACAGCCGGCGTGACCAGGGAGTGTCCGGGGACCAGGTCTCCATCATGGTGGACGGAGTCCAGGTTGCGCTCCCGTCGTATGAGGAGGCTGTATACGGCAGTTCTGGTCACTGTGTGCCGCCAGCAGACCCCAGAGTGCAGATTGTGCTGTCAGAAGGGTCTGGGCCCAGCGGGAGGAGCGGGATGAGGGAGCCGCACCCGCAGGACCAGGGGGCCTGTTCTTCTGCAGGCAGCGAGGAAGAGGCCCCGGGCCAGTCTGGACTGTGTGAAGCCTGGGGCTCTCGGGGCTCAGAGACTGTGATGGTGCACCAGGCAACCACCTCTTCCTGGGTGGCCGGCTCAGGGAACAGCCGAGCGGCACACAAAGAAGCCCCGGATTCAGAGAACAGTGACATACAGAGCCTCGCGTCAGAGGACTACACAGATGATATCCCACTGTTGAAAGAAGCATGAGGGCTGCCACGGGCTTCTCTCCTCTCTGCCCTTCCTCCTCTCCCTGTGGGTTTGAGCACCACGTCCTCCAGCCGCCCTGCCCGGAGACCTGAGCTGCCCACCTGTGTGTCTGTATCTCCGCACCTCTGAGGGCCCACAGGCCCACTATGCTGGAAACTCCAGGAAGAATCTCGCCATCTGCCTGCTGGACGTCTGGAGGAGCTGGCTCCCTGTGCGCCCCAGCTTTTCCACCTGTGTCGGGGACGTTATCTGAACGTGTGGGTTGACCCCTTCCCTCCCCGGAGCCCTCCAGTCCCCTGCAGCCAGCTCCTGGGTGGCAGCCCCCCGGCTCCCGTGGCCCGAGCGCACCGTGTTTACTTGTGCCTTCCTCCCCCCGGTCCGGTCTCCCTGTCACGCGGGCTGGTTGCTGTCCTACAAGCCTTCACGGCTGCGCTGCTGCTCCCCCAGGGGGGCCAGGCCTGGGTCTGGCCCATTTGCTTTGGAGACTGGCTCCAGGGCCCTTAGCAGGAGCAGATCCCAAAGTGGCTTCAGGTGGGGCCAGAGTGTGGGGCCCTGGGCCTGCCATTGGCTGACAGCAGTGGTGCGCTGCCTCGACTGAGGACGGAGGCTGTGAAAAGTCACCCCGCAGCCATCCTCACTCCAGCTGTCTAGCTCAGAGGTGGCGGCTCCTGGCCCTGGTGAGTTTCTGAGAAGCGTCCAGAAGATCCCAAGGGAGGGAAGGAAGGTGGCTGTTAATGATTTGTCTTCCTAATATGCAAGTCCTCACTTCCTGCTTCCAGCATCTGGCCTTCCTGGCCTTGTTTTTTTTTTTTTTTTTCTCTTTCCCTGGAGCCTAAGGGGAAGGTGCCTGCTGCCTCCTGGGTGTGACGCCGTGTGGCCCTGGCTTCCTTGCTGGCCAGGGCCAGCGGCGTCCCCCATGGGACTTGAGAGTTCTGAGATGCCGTGGGATGCCCCACTGGTCACTGGCAGTTGGGGGCCAGTGGCCTCGTCCTGGGTTCGTGGTGATGGAAGGGGGCCTGCGGGGCACCGACCGAGCCCCCAGACGGCTGCAGGCAGCTCCGGCCCGGTCCTGAGGGTCCTCGTCACCGCAGTCACGTGCCTTAGTAACTGTGCCCGGGAAGCATGCTGCCGCTTGCTCGCTGCTGCTTCTCCTCCTCCTCCCGCCCTCCCCTGCTGCCTTCCACTCGTCACAGCTGACAGACAACACCCCTGGAGACATCAGCACACACCCCCACCCGCTGCGTGCGCTTGCTGGTGGGGACGGTTTGGGAGCAGCCTGGCTCCAGGGCCCTGGTGTGGAAGGAGTGGCCAGGGCCCTCGCTGGGGCTGCTCCCTCGGCGGGCTGCTGCCTCTTCATGAGATGTGGCATTAGGGAGTGCTTGTTGTTGCTTTTGTTCCTGAAGCGCTGCCCCTCTGCTCCCCGCTGAGCCTGAAAATACTCGAGCCTGGGGCGTTTTCAGTTCCTGACCTACCAGGGTAGCTCCGGTGGTCTTCTCTCAGCCTCCCACCCCCTTGCTCAACACTCGCACTTTATTCCCGCTTATCCTGGCCTCTCACCCCTGTAGTCTTCCTTCCTCTCAGGTAAGGGCAATGCCTGCCGAGCGTTTCTCTCTCTCTCCTTCCCACCTGGTGCCCACAGCCCTGGCCCGCAAGGAGGAGGTGCCTAAGGGAAAGTGCAGAACGGAGTAGGCCTGCCCTTGGCCTCCAAAGAGGCCGTGTCCAGAGATGCGCCTGCCAGCTGTGGCTGGCCCGGGGCCCATCTGGAGGGCAGGGTCCCCACGACCCCAGTCACTTCAGCCCGCACAGGTTCTGCTCCGCCCGTGGTACCCTTGTCTTCCTCCGGAAGGGAGCAAGGCCCGGTAGGGGGATGGGCTGGGGGTGCCTGCAGAGTCTCACTGCTGAGCCCGCAGCTTTCGTTTCCCCATCTTCCAGCACCTGAACTCGCGTCTAGAATATTTTTTTAAACGGGGCTCTTACCCTTTTTTTATATAAATACTCTGGGGGTTTTCCCCATGAGATTGCACTTTTTGTTTGCGGTTTATCCAGCCACAGAGATGATCCGCCTGCCGCTTGAAAAAAATGAAAAAGCCTGCCTTCTGAACCCTTCTTTCACCTTGCCCGCCCACCCTGCGGGGATCACAAGCCCAGACTTGCCACCTGGGAGGGAGGAGAGAAAAGTTGGGAGGCTCCCCTCCCCTGCTCCCCTGTCCCTGGCTTTGATGAAGCCTGCCTCCTGGAGGCCCCTGGCATGTGGGTACCGGGCCAGCCTCACCTCCCTGCTTACCCGCCGTGATGGCTTCCCGCAATTAGTTCTCGTCTCCCAAATCAGCCATGAACTGCTGTTTCTAGAGCTTCTGGCCCTTGTTTCAGATGTGAAGGATCAGGGCCTCCACGGTGGCCTTGGGGTGGGGGCTGGCTGAGAGACAAGGTGGTGTTGGGGGCCACCAGAGGGGCCTGGAGCAGTGGGGAAAGCTGCCCTGGTGTGGCTTCCCTGGGCTCACCTCTAGGGGAACCCAGCAGAGGACTTGTACAGGAGAACAGTTGGCACCAAAGGACTTTTAAGAAGCGTTTTTTTCTTTTTATTTGCGTACACGGGCTGACTCAATGTAGGTTTTATATCTTGGCAACTTGCAGTCACATTCCAGTGACTTTCAAGGGCCAGTATATGGTGAAAAATCACTTAAATTTTCTAACATTTTCAATGCCTTAGTTCAGCAGGTAGGCTCTATCTTTTGCCATTTTTGAGTTTTGTGTGCTGTGTTCCCATTTCACTGGGTGTGAACTGTGAAATGGGCCAAGTCCTGGCCACTTTGTGAGTTCTTCTGGTTTTATAAGGCATTTCAACGTACATCCTCCCAACACTCCATTTGCAAACAGAACTTAACTCCTGTCTCATCCCCATTCTTCCTGCCAGCCATGAAGCTTCATGGAGAAGCTGATGGCCAGACAAAGGTATACTTTTCCTGCTAAGTCAGTGGTGGCACAGGAGCCCTAGCACTTGACCTTTCCCCTCCCCACCCCTGTGGAGCTCAAACCACTGCTTCCCATATAACTGTCACTTCCATTCCCAGGGAGCATCGCTACATAGAGAATGAAAAATGCTGCAGACATTTCTAGATCCTTGCCTGTTTGTTATTTCCCCCCCTCTCCTTGAAAATATAGGGCCCAGAAGGGAAAGGACACAGGCTTGACAGCTTCATTCCAGATGTGCTTGCTGAGGACAGAGTCCAGGAGCTTCCCTGAAGCCTGCCGGGGCTCCTGGCCTTCAGCACAAGGCCTGTTGTTACTGGAGTCCGGTGAGGGGCTCGGAGAGGATTTTGTGTGGCAGGTTTGTAGACCGAGTGGTAGAGTAGCCAGTTCCCCAGAGAGTGAAGGGCAGGCTCAGCTTTCCTGGGAAGCAACTCCTCTTAACCGCCAGTTGAAAATCTAGTAGAATTTTGAACAAGAACCCCAAGGTTGAGCCCTGTGCTAGGAGCTGGGGGATGTGCCTGGGCAAAGCACTTGGACCATCATGCAGGGAGAAGAGAGGGTTGAGGGTGGCCTGGCGGCTCATCACGCCACTATGGAACCTCAGCAACAGTTTCACATGACACGCGCATCATTGACTGTGCAGGATGTCACCCAATCAGTTTGGGTTTGCTTTATTTTATTTTATATATATATTTTTTGGTATCCTGTACATTGCAGTGGGTGTGAAGATAGTATTTTAATATTTGTACAAAGTTTAATTTAATTTTAATTGTTCTCTGTATATAACTGCATTTCTAAATAATAATAATAAAAAAAAAAGTTCTTTTGAAGG EMBV3_35596 GAGCTTCTGTCTCGCACCTTCACCACAAATGGGACCCAGAAGAAGATCCTTGACATCGCC Variant GeneID:506198|GOSR2:NM_001098885:209_cdna 386^526 2 EMBV3_31673 GeneID:506198 19 GENE GOSR2 MGC148480 golgi SNAP receptor complex member 2 EMBV3_02837 GGTGCAAAAAGAACAAGTCTATAAAAACAAGGAACAGCTCTAAAAGGACTGTTTCTGAAT Gene GeneID:540702|C3AR1:NM_001083752:58_cdna Constitutive 1 NULL GeneID:540702 5 GENE C3AR1 MGC139631 complement component 3a receptor 1 EMBV3_36440 CTGCATTTATGGTTTTTCTCTCTGAACTGCTGAGATGCTACCTCGTGAGACTTGACTCCC Gene BVT0101_054791 + 1 EMBV3_30405 GK000001.2:83846620-83860273 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009009 1 XLOC_004565 NonCoding TCONS_00009009 XLOC_004565 NonCoding NonCoding - 1:83850352-83851071 - TSS6086 719 2 TCONS_00009009_2 36 0.171070931849791 1 0 0 0 0 0 0 0 0 0 0 8.01153548876941e-05 3.18384710812703e-06 0 0 6.54240916010986e-06 0 0 0 0 4.98673275283744e-05 0 0 0 0 0 0 0 0 0 0 0 XR_239284.1 CCDC13 PREDICTED: Bos taurus coiled-coil domain containing 13 (CCDC13), 1e-22 111 79.37 0.173852573018081 0 noncoding 0 0 0 0 -0.0223386018721699 0.891848399643133 0.0268373870599343 0.599836951305769 GAGGAGGTCCTGTAGCCCTCTGGAGTCTGGAGACTTGTCGCCCACAAAGACCTGCCTCAGTCTCTCAGCTCCTGAAAAGTTGGAGAAGAACAGAGTTTACCAGTTTAGTGGCCTATGGTTCTCCCTAACACAAGCTCTGATGCGTGACATTGGAGGGTATACTTATTAAGGATTCTACCAATGTGGTTCAGTTGGGTAGCTCAGTCCCTAGGATTTTATAAGGTTGGTTAAGAGATGTGGCCTTGAATCACTTTAGAAGATTAATCTGGGGAGTCAAGTCTCACGAGGTAGCATCTCAGCAGTTCAGAGAGAAAAACCATAAATGCAGTAATGCATCTTTATACTATTGATGCAGGCCCTGACAGTCCAAAACCTGGGAAGCTCATTTTTCTGTCCTCTCCTGCCCTCTCCTGACCAGAGGCAGGAAGTGCATGCCCCTGCAGCCACATGACTAGGAAAGATCTCCCCAGCAACCTAGGATGCCTCAAGTTTTAAAACATTGTTTCCAGGGACTTCCCTGATTGGCCAGTGGTTAGGACTCCACGTTTCCACTGCAGGGGGCATCTGTTCAATCCCTGATCAGGTAACCAAGATTCTGCATGCCTCATGGCACGGCCAAAAAACAAAACAAAAAAACACCCCACTGTGTCTCTAGACAAACATTGCTTATTAAAAAAGAATAATTTGATTAGGAAATTCAAATTAAAGTCAAAATGAGA TCONS_00001394 . 5' 8940 TCONS_00001394 . 5' 8940 EMBV3_23909 CTCAACCACCCACTGGACGCACCCAGATGGGCCCAAGGAGAGGCCATGAAGGCAGTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19722 ACGGAGTAGCTGCTGCCTCTTTCTCAAGAGCTGTGGAAACTGTTGAAGCCAATGTACGCT Gene GeneID:100336818|LOC100336818:XM_002687170:111_cdna Constitutive 0 NULL GeneID:100336818 5 GENE LOC100336818 NULL thyrotropin-releasing hormone degrading enzyme-like EMBV3_21726 AACTTGGAAAAGTTCAAGACAGCCACACTGCAAAGGGAACTGAAAGAAGCCCAGCAGGCC Gene GeneID:520049|WEE2:XM_002687075:235_cdna Constitutive 2 NULL GeneID:520049 4 GENE WEE2 NULL WEE1 homolog 2 (S. pombe) EMBV3_12024 CCAGGAGCGCTGGCGGGTTATTGCTCTTATTTCTCTGTGCTTACTACTAACATTCCAAAG Gene BVT0102_081906 + 0 NULL GK000017.2:74033721-74049770 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076364 TCONS_00076365 1 XLOC_046804 Coding TCONS_00076364 XLOC_046804 Coding Coding MAPK1 17:73983861-74038113 j TSS57337 4222 1 TCONS_00076364_2 263 9 0.922342445300547 0.00332830304376168 0.0021979744531052 1.29413425117151e-08 0.00116291384655165 0.001480108322317 0.000566226658421091 2.27475862988403e-08 0.00226579613860691 0.000377252438706971 1.60187226827554e-08 5.72914066487533e-05 0.00018311975911337 0.000196727048410499 0.000949770547881401 1.55478670039239e-08 0.00185771623207394 0.00347135327652404 0.00463217823386603 8.15097145526869e-08 1.34759478537909e-06 0.000882615923678045 0.00347189079935437 0.00343724831051051 0.00428651793383016 0.00272297625977683 5.17926242541459e-08 0.00138201531117138 0.000426087740425494 0.000454266877697698 0.000983580180140204 NM_175793.2 MAPK1 Bos taurus mitogen-activated protein kinase 1 (MAPK1), mRNA. 0.0 1779 99.60 0.23567029843676 NM_002745.4 MAPK1 Homo sapiens mitogen-activated protein kinase 1 (MAPK1), transcript 0.0 1510 86.44 0.301515869256277 TCONS_00076364_2 sp|P46196|MK01_BOVIN MK01_BOVIN Mitogen-activated protein kinase 1; 0.0 548 100.00 0.996197718631179 2 coding 0 0 0 0 -0.137819451044469 0.361832338937518 -0.0272218024564641 0.611659458145935 CTAATCCTCATGTAGAAGATACAAAGATGAAGAGTGGAGTTTGAATTGGGCCTTTAAGACTCTGCTTATGACAATGTCAACAAAGTCCGAGTCGCCATCAAGAAAATCAGCCCTTTTGAGCACCAGACGTACTGCCAGAGAACGCTGAGAGAGATAAAGATCTTACTGCGCTTCAGACATGAGAACATCATCGGAATCAATGACATTATTCGAGCACCGACCATCGAGCAGATGAAAGATGTGTATATAGTACAGGACCTCATGGAAACAGATCTCTACAAGCTCTTGAAGACGCAACACCTCAGCAACGACCACATCTGCTATTTTCTCTACCAGATCCTCAGAGGGTTAAAGTATATTCATTCAGCCAACGTGCTGCACCGTGACCTCAAACCTTCCAACCTGCTGCTCAACACCACCTGCGATCTCAAGATCTGTGACTTTGGCTTGGCCCGTGTTGCAGATCCAGACCACGACCACACAGGGTTCTTGACAGAGTACGTGGCCACTCGCTGGTACCGGGCTCCAGAAATCATGTTGAATTCCAAGGGCTACACCAAGTCCATCGACATCTGGTCCGTCGGCTGCATCCTCGCGGAGATGCTCTCCAACAGGCCCATCTTCCCCGGGAAGCACTACCTTGACCAGCTGAACCACATTCTGGGTATTCTTGGATCCCCGTCGCAGGAAGACCTGAATTGTATAATAAATTTAAAAGCTAGAAACTACCTGCTCTCTCTTCCACACAAAAATAAGGTGCCATGGAACAGGCTGTTCCCGAACGCGGACTCCAAAGCTCTGGATCTACTGGACAAAATGTTGACGTTCAACCCTCACAAGAGGATCGAGGTGGAGCAGGCTCTGGCCCATCCTTACCTGGAGCAGTACTACGACCCGAGCGATGAGCCCGTCGCCGAAGCACCCTTCAAGTTTGACATGGAATTGGATGACTTGCCCAAGGAAAAGCTCAAAGAACTCATTTTTGAAGAGACTGCTAGATTCCAGCCGGGATACCGATCTTAAATTTGTCAGGACACGGGCCGAGCACGGCACGCAGACCCCGCGGCTCTCCTGCAGCTCCCGACCCGCCCGTCCCCTCCCGTCTGCGTGTCCACCTGACTCCTCTGAGCCGTCGGAGGGGCGGCTCCTGGTGGTTGTGGCTTCTGTGCTTTCAAAGAACTCCCTCCTGCCAGAGCGCTGTTCTGGCCCCGTGCGCGTCGCCTCTGGTGGCCTGCGGCTGTGCGTCCCTCAGGGCTCCTCCCGCCCACCTTGCTTCAGTCACTAGCCGCCTTCTGCTCTGAGAGACGCAGTGGCCCCTCCCCTCCTGAGTCCTGCCCCGGTGCCCTGCCGGTCGCGTCCCCTGGGCGCTTTACGGCAGCGACCGCCCCCTTGCACTCCCGCCGCCTCACGTCACGCGGATCCCATACGGGCACAGGTGTGGCTTGTAGAGCACTGTCTCTTCTCTAAACGGGAGGAGGCCCACGTCGGGCAGCTCACCTGCCCCGTCGGGGGCACAGCCCTCGCAGGACGCGTCCCACGCAGCCCTGCCTGCTTGCGGGACTCCCGCCAGCAGAGGCGGCTCCCCGGGATCAGGTGAGGGGCGCAGGCCGCGGGGCGCCGGCCCGACGCCTGAGGGCCAGGCGGGGGCACATGCGTCCTCCGGGAGCGCCTGTTGTACACTTCTTCCCTCCTGCAGCATGTCAGCATCTCAAGTTCATCCTCCATCCCCGGTGTGACGGTGTGTGCTAAAGCCCGGTGAGCCTTGGCTGAGCGCCGCCCTGCGCCAGGGCCCAGTCACGCGTGGGGCGCCCGAAGAAGCCCGCCCGCCCCCGGCCCTGGCACCGGCTGCCCCGCCGCGTGGCGCGGCCTCCTGCCCCTGAGCTCTGCGCGCAGCACTCTGCCTGTCCAGCCGTCACTGTCCCCTCGCATGACTGTTACAGCTTCTGTGCGGAGATGAGTCCACGTGCCACGCACCTGTGGTTGAAACGAGACTCTGTTGTTACCTCTGAGTTGTGTTCCACGGAAAATGCTCTCCAGCAGATCACTTAGGAAAAGTTCCTCAGTTCTCAGCTTTTCATTTCTCAGCTGTCCTTTCTTTCTTGTTTGGATTTTGATAGCAGTGGAGAGTGGGTTATATAAAGACTGCCTGCTAACACAAACGGAAATGCGCTTGTCATTCCTGAAAATAAACGGGCGTCCTCTATCTCCTGCTCACATTAAGATTCAGTGTCGATTTCCTCTGGATCGTGGGGTCCGAACCAACAGTCAGGTCAGGCTGTGCTTAGACCAGGAAGCCCAGCGGGCCCGCTCCCTGCTGGGCGCTGCCCGAACACCTGGGTTTGTGTAAGGCCATGTAGACAGCGTTGTGGAGGGGTTTTTTCCTCCACACGGCAGAGCATCAGTTCTGACATGCTCCTCAGATCACAGGTCTGCGGTGTTCTGTCAGACTCTGATGACACAGCCCAGAAGTCACAAGTTGGGTTCTTTGGTTCTTCCTAGAGGGTGGCCTGTGTCCCAGTCAAGCGCCAGGAAGGGCTTGCACCCTCGGGCCGGAGCGGGTGCTGGACTCCCCCGTCAGACCAGAACCACACCTGAGTGTCGGCCCCGAGAGCCGTGGCTTCGCCTCCATGCACGGAGCTGTCCAGTGGAGGCCCGTGGGGCAGCGAGAGGCGAGCGTTGCTGTCCCGGGTACATTTTACCAGGAGCGCTGGCGGGTTATTGCTCTTATTTCTCTGTGCTTACTACTAACATTCCAAAGTAGTGTTAGGAGGTTAACCTGTGGTTCACTAACCAGACAGACAGCCACAGCCTTGGTTACTAACCCCTGGGGGCCGGGAGCTTCCCCGCCCCTCGCTGTCCACGGGTCTGGTGGGCAGGAACCACTAACCCTGTGTGGGAGTCCCTGTAGCCTTTCACTAACCATGCCAAGCTTGGTTCAGCGGGTCAGGGAGCTGTCTGAACAGGCGCCTGTGGTGTGTGAGGCTCACCCTTTGGGTCTGCCTGTGTCTCTCAAAACGTGCACATTAGGTCACATGAATTCATGCTGGTGACCCCGACCACCGCTGCGACTGCTTCCTGCACATCAGCTTGGGGCCGATGGCTTTCTTGGTGTCTAAAATGTAAGCAAAAAATTCCTGTTGAAACATTCCAGTCTCTTGAGTGAGCATGAGACAAGACCCCTCACGAAGCAGCAGGTGGGCCTGCAAGGGCTCGAGACGGCCGCGTGCGCGGGGACGCAAGGCCCTCGCGTCTGGCTGCGTGACTTCTGCTGCGGCCGCGTGTGGGGGGCCTGGGGTCGGTCTGTCCCCGCGTCAGGTGGGGGCACAGCCTGCGACACGCATGTGCCAGTGACGTGCGACACGCGTGTGCCAGTGACGTGCGACACGCGTGTGCCAGTGACGTGCAGACGGTGCCGAGGAGACTGGCCTTCGGTTGCTTAGGTGTCAATACGGTTTTAAATTGGTGACTTTTCTGCAGTACGTGACGGTGTGTTAACACGTACATATGCACACATGCTTTAGGCCCTTCCACGATACTTTTATATTTGTAAGTCAATGTTTTGGACAATCCCAAGTTTTTAAGGGAAATATTTTTGTAAATGTGGTGGTTTTGAAAATCTGAGCAGTCCTTCTGCTTACACGTTTTAAAGCATCTGTGCTTTAAAATTGTGCTGGTGTCTGAAGTGACCCTCTTAGCGCAGACGAGAGGCGTGTCCAGCAGAGGGAACCCAGGGCCTCTGCGTGGCGTCCACCTGGCGTCGCAGGTCAGCGGCGGGAAGCCCGGGGCTGTTCCGGCCTGCGCCGGCTCCCCTGGAGCGCGGCCGTCCCTGCGTGCGTCCTCCGCGTAGAGCAGTTGAGAAAGGTTCAGAGCTGCTTCCTGTCTGCTTTGTACTGTTGGTGCCTTCTTGGTATTGTACCCCAAAATCCTGCATAGATTACTTAGTATAATGGTAAGTTAAAAACAAATGTTAAAGGAAGATTTTATTAAGAATCTGAATGTTTATTCATTATATTGTTACAACTTAACCTTTATTTGTGGTATTTGTGATTTGGTTAATCTGTATAAAAATTGTAAGTAGAAAGGTTTATATTTCATCTTAATTCTTTTGATGCTGTAAACGTACTTTCTAAAAGATGTATTATTTGAATGTTTATGGCACCTGACTTTAAAAAAACAAAAAAATTAGAATCATTAAATTGTGTCCGTGTTACCAGAAGTAGCA EMBV3_24025 GATGACTTCATTGTGTGGATGCGGACCGCCGCCTTTCCCAATTTCAAGAAACTATACCGC Gene GeneID:531379|TMEM30C:NM_001038150:1_cdna Constitutive 0 NULL GeneID:531379 1 GENE TMEM30C MGC134142 transmembrane protein 30C EMBV3_19668 TCTGCAAACTCCTTGTGTTCTGAAGGAATCATTTGCCCACTTCTGGGCCAGCTGTATATG Gene BVT0101_021447 + 0 NULL GK000028.2:31336992-32004680 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159563 TCONS_00159565 TCONS_00159559 TCONS_00159561 TCONS_00159553 TCONS_00159556 TCONS_00159558 TCONS_00159560 TCONS_00159564 1 XLOC_097442 Coding TCONS_00159560 XLOC_097442 Coding Coding - 28:31338750-31348994 - TSS119532 1778 2 TCONS_00159560_4 77 3 0.826710924533828 2.48512102554766e-58 4.62422710026431e-21 0.000248076808539427 0.000172832867048526 0.000534820985446327 2.55703024814567e-13 8.50832185973193e-05 0.000630419574729714 0.000979443354299522 1.28440721913009e-09 7.04166316312131e-152 9.64361251726163e-10 0 1.18920486526921e-05 1.68680247918035e-144 1.31691026853866e-15 0 0 0.00231945307070964 0.000623462385811298 0.000626325129631719 0 0 4.34557098599022e-09 1.40203536188437e-06 0.00174881142641068 7.65785302222032e-11 0 1.43017638285793e-09 0 XR_232246.1 LOC101907017 PREDICTED: Bos taurus uncharacterized LOC101907017 (LOC101907017), 0.0 2085 100.00 0.649606299212598 0 coding 0 0 0 0 -0.426950826190003 0.167657139736611 -0.0257562330672153 0.625942551259397 GTGATTGGTGTGGGGTGGGAATTTGGGGATTCTTTTATCCCCTGCATCTCAAAGGCTGACAGGCTCTTGAGGGGTGGAAATGACTGGTAATTAGTGAACCTTCTACGCACGCACTAAAGACGCACTTCACAGTCTGCATGACCTCTGCAGCCCGGTGAGGCTTTGTTATGTAGATGCTCTTAATTGGTTTATAGATCACCTCTTCTGGGCAAGGCTGAGAGTATTTTGAAATATAACTGGGTTCCCTACAGTCAAGGAACTGACCACCTAGTTGGGAAGATAGTGGCAGAAATCAATGCACATAACAACGTCAAGTTGCAGGCATCAATGCCAAGCACACAGGAGAGCCTTTTAATGATGTTTCAGACCCCAAAGCAGTCATCGAGGGTTGGAACATTGGAGATCCTTGTCAACAAGCTGCTGATGCATGGAGTTGGAAGATTTAAGGAATCAGTTCCTGTTTCTCTGGTTCTGGCCGACCCTAGAATCAACTCCCTTGATTGGAAATAAACAGGATTTTCCTTTCTGTCCCCAGGAATGTGACGGAGGAAGGACTCTAGGGGAAAAGGCCTCGTCTGCCAAAGAATAATAATAATAACAAAGATGACAGTAGGAATAAAATATCGCCCTCTTCATGGAGGGCAATAAGGAAGTATCCCGTTATATGTGTTGAGCCTTCTCACTCTCCATATACATATGTTAGAACTTCAGAATGTAGCTCAGGTTTGATTTGAACTTTCTGTCCTGTGGCTGTCTTGAGTGTACTGAACAAATTGGGCTACATGTCTCACCTTTGGTTTCAGAAAATAGGACCCCAATTACAGCACTTCGTGTTGACATAGTACCTTAAATGCCTGAGTATGAACCTCTTTCCTGGAGGGTGTGTCTGTGTCATGAGTGCCCCCAGTGCCCGGCATGGGGCCTAGCCTTTGGAAACTGGGGCAGAGGGGCTGTGATAATAAATGGGTGAGGCAGGGAGTCCTCCAGCTCCCTCTCTCTTGGCTGAGGAATGGGATGAACCCGGATGACTGCATGAACCTTCCCTTCCCCTTGGTGCTCCTGGGGCAGGGAAGGAAGAGCTTTATGCAGGGAGAAACCCCAAGAAGACTCAGCCTCTCTGTTGATTTCTGCAAACTCCTTGTGTTCTGAAGGAATCATTTGCCCACTTCTGGGCCAGCTGTATATGAGTTTGCTCTCTCCCCTCCCAAGGGGAGGTCCATGTTACCTGAAGAAACTTACCTTTTGCTATTTCTATTAAATTTCCCTTTTTCGTTAAGAAGGTGGTGAGGTAGAAGAATGTCCCTGCCCTGCTCACTCTTCTGATCTTCCTTGGTTCAGAGATATAGATAATTTTTCTCCTTCTCCTCTCCCTCCCGCTCCTTCTCCTTGTTCCTCTGTTCTGAAGACTGACTTCCCAAAGCTGAGGGGAGTAAGGAGAGGTGAATCCAGTCTGTTCCTAGAGGAGCCCTCCTCCACTACGTTAAACAGACTTTTACTCTGCTGAATAACTTTCAATAGCTCCCTATTGTCATCAGTTTACATTTCTAACATTAAAGCCCACTTTAACATGAGCTGTCTTGAACTTTGTGCTTTGTGATTTCCCAATGCTCTCTCCCCGAGTCAAATAGCCTTCCTAGTGTGTTCACTTAGTGGAGACGAGTGGTTGGAGAGGCATTTGAGGCAAAACCAACAGCCAAAAGGCAAGCAGAGGAAAGGAGGCCGGAGAGGCAAAGGTTGATGGGATATAAAAGGTCTTGAGGGACGTAAGTATGATGATT TCONS_00159551 TCONS_00159552 s 3' 11726 TCONS_00159551 TCONS_00159552 s 3' 11726 EMBV3_38290 ACAGGTTGTCAAGAATATTTGCAAAAGGAAACCATTTCTGGTTATTGGCAATATAAAGTG Gene GeneID:519882|SPRED1:XM_002690783:205_cdna Constitutive 2 NULL GeneID:519882 10 GENE SPRED1 NULL sprouty-related, EVH1 domain containing 1 EMBV3_20632 GTGCATGATGGTGAGAACCCAAGTTATCTTTCCTTCGTCGGTGTTCTTCTCTCTGCAATG Gene GeneID:532565|RTN1:NM_001075966:148_cdna Constitutive 0 NULL GeneID:532565 10 GENE RTN1 MGC140760 reticulon 1 EMBV3_41127 AACGACGCACCAGGGTGTCCCAGAGCAAGCCACCCTTGCTCCAGTTGCTGGGAATAATAA Gene GeneID:511774|C1QTNF1:NM_001083409:386_cdna Constitutive 1 NULL GeneID:511774 19 GENE C1QTNF1 MGC143272 C1q and tumor necrosis factor related protein 1 EMBV3_35301 GCTTCGGGATTGCCCCGAGAAGCCGCAGAAGTGCAATGAAGGTTTAACCCAGAAGAATTT Gene GeneID:100295594|LOC100295594:XM_002696274:87_cdna Constitutive 0 NULL GeneID:100295594 20 GENE LOC100295594 NULL hypothetical protein LOC100295594 EMBV3_36289 CATCCAGACCATGGGTGCTCACGCTTTGTTACACTGGATTTTCCCAAGAGGTTTTCCAGC Gene GeneID:615389|TMEM170B:XM_002697591:47_cdna Constitutive 0 NULL GeneID:615389 23 GENE TMEM170B NULL transmembrane protein 170B EMBV3_41608 TGGCTTATCACTCGGGCTACGGAGCCCACGCAATGGCCTTCATCACCTACGTGCTGCTGG Variant GeneID:506336|YIF1A:NM_001034269:521_cdna 199^594 4 EMBV3_08371 GeneID:506336 29 GENE YIF1A MGC127000 Yip1 interacting factor homolog A (S. cerevisiae) EMBV3_23638 GCAGCTACAGAAGACAAAAGCCAACAACAGCAGAAGAAGCCTTTGTAAATGACATTGAGG Variant GeneID:281078|CLTA:NM_174022:8_cdna 573^667 7 EMBV3_36060 GeneID:281078 8 GENE CLTA CLTA2 MGC140767 clathrin, light chain (Lca) EMBV3_01328 CCTCTGGCAGGATGAGGCGTGCAGGCCTGGCTTTCCATTGAAATAGGGCATGAAGTTAAA Variant GeneID:616526|BET1:NM_001099157:63_cdna 128^252 1 EMBV3_35940 GeneID:616526 4 GENE BET1 MGC166065 blocked early in transport 1 homolog (S. cerevisiae) EMBV3_30109 ATTGCCTACTGGGATCCAGGAAAGCTCCAAACAAAGGTGCGGTTGGATAAAGGGAACTGG Gene GeneID:531877|PTPN12:XM_002686751:30_cdna UTR3_Alt 2 NULL GeneID:531877 4 GENE PTPN12 NULL protein tyrosine phosphatase, non-receptor type 12 EMBV3_24579 CATCTGCCGCCCATTGCACTACCCAACCATAATGACCAGGAAAGTCTGTGGAACCCTTGT Gene GeneID:784100|LOC784100:XM_002690669:244_cdna Constitutive 0 NULL GeneID:784100 10 GENE LOC784100 NULL similar to Olfr736 protein EMBV3_26797 GCTTCCACAGGGAGCCAGGCCTCGGATATAGACAAGATTTTGGGATTCTTCAGTGATGGC Gene GeneID:540626|FAM118B:NM_001015677:29_cdna Constitutive 0 NULL GeneID:540626 29 GENE FAM118B FLJ21103 MGC140716 family with sequence similarity 118, member B EMBV3_33219 GTCACTGGATACATTTTTTGCCATTGTGGACTTTGTTGTCACCCCCGTCTTAAATCCTGC Gene GeneID:785683|LOC785683:XM_002690707:353_cdna Constitutive 0 NULL GeneID:785683 10 GENE LOC785683 NULL similar to olfactory receptor Olr758 EMBV3_15238 CCTTCACCCACTGTTTGATGAGACCTTTGAATTCCTGGTGCCTGCTGAGCCGTGCCAGAA Gene GeneID:506146|UNC13D:XM_002696175:151_cdna UTR3_Alt 2 NULL GeneID:506146 19 GENE UNC13D NULL unc-13 homolog D (C. elegans) EMBV3_16829 GCCTAGCCCTACCGGACTACGAGTATCTGGTTTTAACAGTGTATGTCAGGGAACTCATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07110 GTGGCCTATGCCTTCCCCCGCGTTAGAATCATCACCACAGCAGTAGACAAACGCGTCAAT Gene GeneID:534046|UCKL1:XM_002692400:337_cdna Constitutive 1 NULL GeneID:534046 13 GENE UCKL1 NULL uridine-cytidine kinase 1-like 1 EMBV3_19830 GGAGTACTACCAGAGCAACTATGTGTTCGTGTTTCTGGGCCTCATCCTGTACTGTGTGGC Gene GeneID:512653|RABAC1:NM_001075575:196_cdna Constitutive 2 NULL GeneID:512653 18 GENE RABAC1 NULL Rab acceptor 1 (prenylated) EMBV3_32815 GCTATAATGGGTATGGAGGAGGACCTGGAGGAAATTACGGGAGTGGAAATTACAATGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19822 TGATCAAGGGAACGAGGACGACAAAATAAAGGCGACCCAGAGGCTTCTAGACCAGCTGCC Gene GeneID:100337360|LOC100337360:XM_002688053:1_cdna Constitutive 0 NULL GeneID:100337360 6 GENE LOC100337360 NULL T-cell activation Rho GTPase-activating protein-like EMBV3_40162 CCCTCTGCACTCTTGATTAGGTTGTCATCAGGTGCCTTTTGATAAATGTTTAAAATACAC Gene GeneID:522946|ILDR2:NM_001102073:26_cdna Constitutive 2 NULL GeneID:522946 3 GENE ILDR2 C3H1ORF32 MGC148927 immunoglobulin-like domain containing receptor 2 EMBV3_22790 AGTACGGCCAGACTGCTGTTGATTACCTGGCCAAAAATGTGAGCCTGTCCACACAGCGTC Gene GeneID:536229|PAX7:XM_002685738:477_cdna Constitutive 0 NULL GeneID:536229 2 GENE PAX7 NULL paired box 7 EMBV3_05772 GGTACCTAAAAAGAGGGTCTTCACCGTATTTTGCCATGGGGAATGAATAGGGGAAGGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29542 GCACTAGTTAACCCTGGTCAGGGGTCCCTATGTTTCCTTCCAGTGGTGGAGTTGAATAAA Gene GeneID:613607|ZBTB4:XM_002695788:306_cdna Constitutive 2 NULL GeneID:613607 19 GENE ZBTB4 NULL zinc finger and BTB domain containing 4 EMBV3_23065 TGAAATCGGGTTGCAATGAGAAAGCATTTGTTTTTCCACCAGGCTCCCAAGTGTGGTCGT Gene GeneID:510763|MYBPC1:NM_001110773:992_cdna UTR3_Alt 2 NULL GeneID:510763 5 GENE MYBPC1 MGC155210 myosin binding protein C, slow type EMBV3_16509 CACAATAGATAGAATGTGCTTGAATCATCCTGACACCATGCCCCACCTCCGGGTCCATGG Gene GeneID:100296248|LOC100296248:XM_002690517:514_cdna Constitutive 0 NULL GeneID:100296248 10 GENE LOC100296248 NULL hypothetical protein LOC100296248 EMBV3_15001 CTCATGGGGGGCATCTCTTGTGCTTACTTCCATGCTCATCTTACCCCTGAGGCTTCACTT Gene GeneID:786155|LOC786155:XM_002699534:15_cdna Constitutive 0 NULL GeneID:786155 X GENE LOC786155 NULL similar to Olfactory receptor 13H1 (Olfactory receptor ORX-1) EMBV3_40569 CTCATGGATGGGGACTTAGCTATTGGAAAGGTCCTGCCAGGTGCGGACTCTGATGACTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37500 ATGCATAGTAAATGATTGGGGCAAAGAGTGAACCTTATTAATGACAAGGGAAACCATGAT Gene GeneID:326580|VAPB:NM_001082423:782_cdna Constitutive 2 NULL GeneID:326580 13 GENE VAPB NULL VAMP (vesicle-associated membrane protein)-associated protein B and C EMBV3_33783 CATAACAGTGGCTGTTAAGTCATCTTCAGACCTCTGCCCATTCAGCCCACCTCCTCCAGG Gene BVT0102_086144 + 0 NULL GK000007.2:21535944-21539980 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212422 TCONS_00212423 TCONS_00212430 TCONS_00212427 TCONS_00212420 TCONS_00212424 TCONS_00212421 TCONS_00212431 TCONS_00212426 1 XLOC_130179 Coding TCONS_00212420 XLOC_130179 Coding Coding PIP5K1C 7:21487829-21537927 j TSS159405 4950 1 TCONS_00212420_6 695 19 0.901570952352436 0.00122543359433344 8.27702114691724e-19 0.000476051279065724 0.000664937777355706 0.000251802434906908 4.83488133669964e-23 0.000222538813391282 4.61192388332285e-10 1.44682829785287e-05 2.11652853285581e-05 8.63501241779001e-06 3.32787921639356e-07 5.03736896190125e-09 9.46328021162201e-07 4.11279214387472e-10 1.77442506139001e-17 1.1641532959796e-12 1.28592317967057e-36 0.000357511568976808 7.63475603761823e-05 0.00142068809450089 3.82275073795206e-11 4.46862884120002e-08 3.63182284333467e-14 0.000707131655795497 1.75567725964831e-08 0.00164258380861098 1.3564818215932e-10 1.35244219036376e-22 9.94070350308228e-12 XM_005208921.1 PIP5K1C PREDICTED: Bos taurus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), transcript variant X3, mRNA. 0.0 8875 100.00 0.993939393939394 XM_005259523.1 PIP5K1C PREDICTED: Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), transcript variant X1, mRNA. 0.0 2704 88.37 0.424242424242424 TCONS_00212420_6 sp|O70161|PI51C_MOUSE PI51C_MOUSE Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma; 0.0 1196 88.79 0.998561151079137 1 coding 0 0 0 0 -0.304010836704605 0.305820066013914 0.0102536949441128 0.821834913659256 GCCCCCTCCCTCCGCTCTCCAGCCGGCGGCGGTTGTTGTTCAGCGACGGCGGCCGCAGCTCGGGTCGCAGCCTCCGGCCGCCCGGCCGCCCGCCAGCCCGCCGGCGGGTCCGCGCGCGGCCATGGAGCTGGAGGTGCCGGACGAGGCGGAGAGCGCCGAAGCCGGGGCCGTGACCTCGGAGGCGGCCTGGGCAGCGGAGAGCGGCGCGACAGCAGGTTCGGCCCAGAAAAAGACCCCAGCAGAGGTCCCACTGATGACTGGACAGCCCGGCCCTGGCCATGGGAAGAAGCTGGGTCATCGGGGCGTGGACGCATCTGGCGAAACCACCTACAAGAAGACCACGTCCTCTACCCTGAAGGGGGCCATCCAGCTGGGCATCGGCTACACCGTGGGCAACCTGAGCTCCAAGCCGGAGCGCGACGTGCTCATGCAGGACTTCTACGTGGTGGAGAGCATCTTCTTCCCCAGTGAAGGCAGCAACCTCACTCCTGCCCATCACTTCCAGGACTTCAGGTTCAAGACCTATGCGCCTGTTGCCTTCCGCTACTTCCGGGAGCTCTTTGGGATTCGGCCAGATGACTACTTGTACTCGCTGTGCAACGAGCCGCTCATTGAGCTGTCTAACCCCGGTGCCAGTGGCTCCCTGTTCTACGTCACCAGCGACGACGAGTTCATCATCAAGACGGTGATGCACAAGGAGGCCGAGTTCCTGCAGAAGCTGCTGCCCGGCTACTACATGAACCTCAACCAGAATCCCCGGACACTGCTGCCCAAGTTCTATGGGCTATACTGCGTGCAGTCGGGAGGCAAGAACATCCGCGTGGTGGTGATGAACAATGTGCTGCCACGCGTGGTCAAGATGCACCTCAAGTTCGACCTCAAAGGCTCCACCTACAAGCGGCGGGCCAGCAAGAAGGAGAAGGAGAAGAGCATCCCCACCTACAAGGACCTGGACTTCATTCAGGACATGCCCGAGGGGCTAATGCTTGACGCCGACACCTTCTCTGCACTCGTCAAGACGCTGCAACGCGACTGCCTGGTGCTGGAGAGCTTCAAGATCATGGACTATAGCCTGCTCCTGGGTGTCCACAACATCGACCAGCAGGAGCGTGAGCGGCAGGCTGAGGGTGCCCAGAGCACAGCTGATGAGAAGCGGCCGCTGGGCCAGAAGGCACTCTACTCCACAGCCATGGAGTCCATCCAGGGTGGCGCCGCACGCGGGGAGGCCATCGAGACAGATGACACGATGGGGGGGATCCCCGCCGTGAATGGTCGAGGAGAGCGTTTGCTTCTGCACATTGGAATCATCGACATCCTGCAGTCCTACAGGTTCATCAAGAAGCTGGAACACACCTGGAAGGCTCTCGTCCACGATGGGGACACAGTCTCCGTCCACCGGCCCAGCTTCTATGCCGAGCGCTTCTTCAAGTTCATGAGCAACACGGTTTTCCGGAAGAACTCCTCCCTGAAGTCCTCACCGTCCAAGAAGGGCCGTGGTGCCTTGCTGGCCGTCAAGCCCCTGGGACCCACGGCCGCCTTCTCGGCCAGCCAGATCCCCAGCGAGCGGGAGGATGCACAGTACGACCTGCGGGGGGCCCGCAGCTACCCCACACTGGAGGACGAGGGCCGGCCGGACCTCTTGCCCTGCACGCCGCCGTCTTTTGAGGAGGCCACCACCGCCTCCATCGCCACGACCCTGTCCTCCACGTCCCTCTCCATCCCAGAGCGGTCCCCCTCAGAGTCATCGGAGCAGCCGCGGTACCGGCGGCGCACACAGTCCTCGGGACAGGATGGCCGGCCCCAGGAGGAGACGCACGCGGAGGAAGACCTGCAACAGATCACAGTGCAGGTGGAGCCCGCGTGCAGCGTGGAGATTGTGGTCCCCAAGGAGGAGGATGCAGGGGAGGGGGTGTCCCCAGCCTGTGCCTCTGCCGCTGTCGAAGCGGAAACCGCCAGCCAGGCCTCCGAGCCCGCCAGCCAGGCCTCCGAGCCCGCCAGCCAGGCCTCGGACGAGGAGGACGCGCCCGCCACGGACATCTACTTTTTCACCGATGGGAGGTACTGGATTTACTCTCCCCGGCATCGCCGACTGCGGGCCGTGACGCTGAGCTCCTCAGGGACTCCCACCGATGAGAGGAGCTGGGTGTACTCCCCGCTTCACTATAGCACGCAGGCCCAGCCTGCCTCCGACGGCGAGAGCGACACATAATTCCTATGCAGACACTGACCCGGAGCCGAGTGCCCGCTGCTGCCCCGGCCACTTCCTGGAGGCACTGCCCACCTCGCTCAGCCCAGAGCTTGGGAGATGCCCGCCTGGCAGCCAGCCCTCGCCCTCGTCCTCCCCTGACGACACCAACACTCCTGGCTGCTGAGCGACCCCCATCCGGACGGCCTGCCCCGCTCTGGCTCCCCGACAACTACCTACGCCTGATACTGTGAACCCTCCTGCATTTCCGATCATGTATTTATTTTGGGTCCTTATTCTTTGCACAGACATGGTAGCACACATGGGTGTGTTTTTTTAGAAAAAGGAAAAGGCAAAAAAAAAACCCACAATGGAAAAGAAGAAACTCTATTTTACTGCACTTTTGGTTCATTGCTGTGCTTGCATGTTTTGCTGAGGGAACCTGCGCCCCAGCGGAATCCACTCTAGGTCTGGGCCGGGGTGGACAGGCCCCTAGGACAGAAGGGCCACTGCGTTCCCCAGGGTGCCTCTGGAGGCTGCACACTGCACCTGCCAAGCACTGTCGGCTCAGGTTTTGGGGCCGAGAGAGCTGGACACCATCCTTGAGGGCAGCACAGTGGTGGCTGGGGATGGCTTTTCACCAGTGGCCCTGCCATCTCTCAGCATCTGTCTCCCACCACCTGCCTCCCATGTGACCGCGAGCAGGAATCCCCAGGCGTAATGAGAACCTCCATGTGGACACATAGCTGCCCTGACTCAGTGGAGCTCAGGGCTGTGGGCTTCTCTCTTCTCTGGAAGACGGGCCTAGGCAGGAGGAGGCAGCCAGGCACTGAGGCCCTGGGACTTCCCAAGGTCTGTGTCCTGAAGGGGAGCCCCCACGGGCAGGCCGCCAGGGCTAGAAGACCAGACCCCCTCCTGTAAAAAGACGGAGGTAGGCATCCTCTCTCTTTTAAATGATGGAGACACCTGTGCCAATTGAAGGATAGGAAAAGAAATTATTGGTGAAAAAAACAATTTTTTTTGGATGGTCCCACTTCTGGGTCCAGAGCCCCACAGGGCAACTGCCAGGGGCCCTGCTGCGTCCATAGGCGGCTGCTGGAGCTGACAGCTTTGCAGGGTCTCTCCTGCCTGCCTCCGGAGAGGGACGCATCAGGGATTGTTCACTTGGCCCACCCGGCCCTGCGTGGGAGGAGCTGGGAGCCAGTGTGGAGTGGAAGTTGCACTTTGTGGAAGAACTCCCACCTTTGCCTCCCTGGTGGAGCCTGAGATGGCTGGAGAACCTGCCAAGCCAGGACCTGATTTTCAAGTTCGTTGCAAGCTGTGTACACTGCTGTCTTTTCCTACAAGGGCCCCTCGTCACCTCCCCTGGCACAGCCTGCTTTGTGCACCTGGACAGAGCCTCTTGGCTGGCTGTACCCCTCCTCGGGCTGTGCCCCAGGGGCTCTCCACTCACAGGGCCACCAAGGATGCCGCAGCACGAGGCTTGGGGAAGAGGATCCATCAGAAAAATCCTACAGGCGTTCTGCTCCCTTCCTACCTGCGAGGGGGTGTCCAGACCCTAGAGCATCCTCACCGGGACTTCCACCAAGGCACCATCCACAGTGCCCCATGCACACAAGTCCCCAGTTGGTGCCTGCCCTGTCCCGCCTGGAGGAGGTGGGCTGAATGGGCAGAGGTCTGAAGATGACTTAACAGCCACTGTTATGTTGCCCCAGTGCCGACATCAGAGCCCCTGCCCCAAGGCCAGCTGCAGAGATGCGGTGCATCCCGTGGGGACGACCAGAGCAGCAGGCCCCACTTCCAGGGCGCCCTCGGCCACCTGGAGCTGGGGAGTGGGGCCCTGGGGCTTTCCTGAGTGAATCACAGACAGATGCTTACTTGGAGAAGTTTGCAAACCTCCTGGACATCATGATGTTTTCATTCCCGTGCTAAGTCATGAATACCCCTTCAGAGTCCCCTTTGTGTTGGTTGCATTTTTTTGTCCCTTTTTCAGAGAACTGTCACATGGATGCAAGGTGGTCCTCGGATTAGGCTGCCGGGAAGTGTGTGCTTATGGTCAGGGTGAGAGGGTGGGAAGGCAAGACCTTATTTGTAACATGCAGTGAACTCATGGCCTTCCCCAGACCCCCAACAGGAAGGGCCCTGGACCCACCCAGCTGTCATCCCACCCCCAGGATAGCAGTCTGCCAACTCCTTGGTGGTGATGCCCCAGTTCCGTCCCAGCTTGTCCTTGACAGCTGCTGTCACTGAGAACATGGGCACTGTCTGCCGTGCCATACTGTACACGGGAAAGGTGTGTCCTGAGACTGACAAGGTGGGATCTCCCACGTGTCCCCTCCCAGCCTCCATCCTCTGCCTCCTCTCGCCCCCTTCCTCCCACCACCTGGCTCAGTGCAATACTCCCATCCCCATGGGGTCCCCTGCCATGGTACTGTCGCCGCAGCCCCTCGGTCCCCACCCCAGAACAAGCACCCTCGGTCACCTCTGGTAATTCAGTTGCATCGCCTGTCCCCACCCCAACCCCATTTTTATGGCCCATCTGATTTCCAAACACAACAGAACTGCAAACCTTGTGTGTCTTAATCTCACTGGGGGTTCCGTGTGCTCAGCCCCCGTGGTCTGGTGTGTGACAATCCGGGGCTCAGCCTCCTCGGGCGCAGGACGCCAGCCCGCTCAAACCCAGAGCCGTGGGCGCCTCTGTGACCGCAGCCACTGCTGGCCCCATAACACTCGTATGCAGCCCCAGATCCTCCCCACCCCAGCCC EMBV3_31248 AGCCTCTATCCGGCCGACTTCAACATCCAGGTTTGTGAATTTCCCAGATCAGCCGGTGGT Variant GeneID:534094|INTS10:NM_001099061:88_cdna 200^267 2 EMBV3_31788 GeneID:534094 27 GENE INTS10 MGC152159 integrator complex subunit 10 EMBV3_37654 GAAATTTTGACTTACTGTTTCTGTGGATATGCATTCCTAATGAGATGGTTAACTTTTTGG Gene GeneID:281865|IMPA1:NM_174361:9_cdna Constitutive 3 NULL GeneID:281865 14 GENE IMPA1 MGC140630 inositol(myo)-1(or 4)-monophosphatase 1 EMBV3_12194 ACATCAGCAGGAGGACCACGGGCTTCCAGTTTGGCTGCGCCCCACGCTTCAAGGATTTCC Variant GeneID:534297|METRNL:XM_002696106:183_cdna 602^940 5 EMBV3_33495 GeneID:534297 19 GENE METRNL NULL meteorin, glial cell differentiation regulator-like EMBV3_03363 CCTGAAGAGAGAGCCATTCTTCAATTCCAATTCAGTGTGGGTGACAAAGTGAAATTTAGA Gene GeneID:530506|SMARCAD1:XM_002688136:22_cdna Constitutive 0 NULL GeneID:530506 6 GENE SMARCAD1 NULL SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 EMBV3_16147 CACTTAATTGGCTTGTTTTTGAAGTCCCCACACTCTTAACTCCTCACTGGGACGGGTCAC Gene BVT0102_093908 + 1 EMBV3_33558 GK000001.2:71280649-71396748 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43167 GGGCAGCGGATGGGCCTGATAATCTATGTGAGTCTACTTCTGCTGACTCCAAAAATCCTG Gene BVV0102_030805 + 0 NULL GK000002.2:8068231-8776556 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056145 TCONS_00218428 TCONS_00175509 TCONS_00118459 TCONS_00220566 TCONS_00222867 TCONS_00091490 TCONS_00165977 TCONS_00253647 TCONS_00253740 TCONS_00040258 TCONS_00250903 TCONS_00223765 TCONS_00031886 TCONS_00133817 TCONS_00110425 TCONS_00123823 TCONS_00174808 TCONS_00174809 TCONS_00211020 TCONS_00174807 TCONS_00132066 TCONS_00030963 TCONS_00063194 TCONS_00107436 TCONS_00198299 TCONS_00078426 TCONS_00170890 TCONS_00174805 TCONS_00023655 TCONS_00171428 TCONS_00147537 TCONS_00207933 TCONS_00205125 TCONS_00174806 TCONS_00188145 TCONS_00175566 TCONS_00002600 TCONS_00000529 TCONS_00198820 TCONS_00170891 36 XLOC_033948 XLOC_131748 XLOC_105290 XLOC_072622 XLOC_133883 XLOC_136174 XLOC_056264 XLOC_100817 XLOC_156586 XLOC_156679 XLOC_024074 XLOC_153846 XLOC_137064 XLOC_018131 XLOC_081223 XLOC_066329 XLOC_075375 XLOC_104695 XLOC_129530 XLOC_080699 XLOC_017212 XLOC_037921 XLOC_063346 XLOC_119956 XLOC_047314 XLOC_103679 XLOC_014322 XLOC_103815 XLOC_089424 XLOC_126448 XLOC_124587 XLOC_114188 XLOC_105347 XLOC_000643 XLOC_000141 XLOC_120473 Coding TCONS_00123823 XLOC_075375 NonCoding NonCoding - 21:34656367-34662647 - TSS92582 6280 3 TCONS_00123823_4 92 0.992675159235669 1 0 3.77134517527418e-05 4.21711484909763e-05 6.36514048010475e-05 3.23976139061837e-05 6.15331922129947e-05 3.61700959405924e-05 1.61526940260824e-05 6.0735715796653e-05 3.88954490514635e-05 0.00595356662766109 0.00300315911924533 0.00173409760772519 0.000118225667385741 0.000425361799399912 0.000169227460384902 0.0482497752055065 0.0251893156191683 0.0387135172272996 1.57274342601737e-05 1.68872656173388e-05 1.65937901894413e-05 0.0286143890436025 0.0366562465344312 0.0402979952275959 2.89694279046929e-05 2.21167479186835e-05 1.12648953241591e-05 0.0178434173707148 0.010300482077611 0.0272490970592757 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1490 91.55 0.167197452229299 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 3e-30 140 64.52 0.133917197452229 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 TTGTTGTTGAATCACACGAATACACCAGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTACTTCTGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGTAAAAACAAAACAACCAGAATTAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTACAAAGTGTTTGCACCAGTCCATTCTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCATGGGAAGCCTTTCACTGACGAAGAGGGGAGTGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAAGAGTGAGCCCAGGACAGGAGGACATTGTCTTGAGGATCCAACGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCATAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGGCTAATGAGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCGTTTTTCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTTCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGCCCCAATTACTCGTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGTCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCTTCTGTCTCAGCACAGAGCAAAATATCTACATATTGTAACACCACTGCTTCAGAGCTGTTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTGCCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCCTTAACTTCATGTTTCAGTGGATAGTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTCATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGATGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACACCTCTGGGGGCAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGAGCATTTTTCTCAGGCTATTTAAGAACGTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGACTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCTGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCATTCTCCCTCTTCCCTACTGATTCATTACCAAGCCATTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGATCATAAAGCAAAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCTGGTACGGGGGCAAAGGAAGAGGACAGGAGGGAGCTGAAGGTTTCACACCCAAATCTATACCCTTAGGACGTAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGTAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAGGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCGCCGTACTCGTCCCTCCAGGTTCTACCACCGGGATGGGGTGGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACCGCTGTAGGAAACATTCGTCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGACCACAATAAGACCGACGCAAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCTGGCATTACCAAAGAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTCCGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACGAATCCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATATCTGGTCGGTTCCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAATGCCCCGACAGGTTTCTGCCATAAGCTGTATGAGATCACCATGGAACCGCAGAGCAGGGCCCCTTACTTGCTTCATGCAGGGCATGCCATTCATTCACACAAGCACACGGTAGAGTTAGTAAAGCATGGCAGAAAACGTGTTCGCTAAGAGAACAAAGAACTAAAGCTCCAAGCTTCCTTACCTTGTCCTGAAGGATCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACACGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 4739 TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 11018 EMBV3_13101 AGAGAGAAGCACACAGGGAAAATACCACACGAACATGAAGGCAGAGAAATGTGCTCGCGG Gene GeneID:100337310|LOC100337310:XM_002689370:36_cdna Constitutive 0 NULL GeneID:100337310 7 GENE LOC100337310 NULL hypothetical protein LOC100337310 EMBV3_33632 AAACCCTGTGCTCTTCTCACTGGGAAAAGGGCCATCATGATCGGGGATGACATCGTGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11057 CCTGAGAAGGCTCAGGGCCATTAGCATGAGAATGATTTGGTCCATCCTCCTCTTCCAAAG Gene BVV0102_148068 + 0 NULL GK000008.2:25137855-25150023 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224743 TCONS_00224742 TCONS_00224744 1 XLOC_137625 Coding TCONS_00224744 XLOC_137625 Coding Coding PLIN2 8:25129154-25143156 j TSS168470 1678 1 TCONS_00224744_3 447 9 0.880794228983644 0.00201358646744317 0.00196190139388846 0.00285871923508705 0.00251608191586791 0.00237493040866531 4.08344341923875e-09 0.000591468284421285 0.000538208115337436 0.000872923121299261 4.02515323312844e-06 7.9380795757666e-06 1.34084453864401e-09 6.9524482653721e-05 0.000714128653371134 6.61898822662704e-06 0.00204898789597599 0.000117278239692831 0.00211898286385833 0.000476236359759542 8.01355769601221e-05 4.55845616010399e-09 0.000761215708020021 0.00223696037633009 0.0016860127475625 0.000857490402487155 1.34561053304646e-08 0.00168278182989835 0.000384188381018394 0.000186546951201557 0.000163576250794546 XM_005209905.1 PLIN2 PREDICTED: Bos taurus perilipin 2 (PLIN2), transcript variant X2, 0.0 3027 100.00 0.999404052443385 NM_001122.3 PLIN2 Homo sapiens perilipin 2 (PLIN2), transcript variant 1, mRNA. 0.0 1590 88.81 0.728843861740167 TCONS_00224744_3 sp|Q9TUM6|PLIN2_BOVIN PLIN2_BOVIN Perilipin-2; 0.0 824 96.65 0.932885906040268 1 coding 0 0 0 0 -0.174205115789629 0.17926226517317 0.0213477327583876 0.672069992651593 CTGTGAACGCCTCACAGACTCAGCGGATCTTCGCGCTTGGGCGTCTGCTGGCTGATTTCTTCTTTCTCCAGCAAGAAAGATGGCATCTGTTGCAGCTGAACCACAACTGAGTGTGGTGACCAGGGTGGCCAACCTCCCCTTGGTGAGCTCCACGTATGATCTGGTCTCCTCGGCTTACATCAGTAGAAAGGATCAGTATCCTTACTTGAAGTCTCTGTGTGAGATGGCAGAGAAGGGCATGAAGACCATCACTTCTGTGGCTGTGACCAGCGCGCTGCCAATCATCCAAAAGTTAGAGCCACAAATTGCTGTTGCCAATACCTATGCGTGTAAGGGGCTAGACAGGATTGAGGAGAAGCTGCCTATTCTGAATCAGCCAACAAACCAGGTTGTGGCCAATGCCAAAGGGGCTATGACTGGGGCAAAAGATGCTGTGACGACTACTGTGACCGGGGCCAAGGATTCTGTGGCCAGCACAATCACGGGGGTGGTGGACAGGACCAAGGGAGCTGTGACTGGTAGTGTGGAGAAGACCAAGTCCGTGGTCAGTGGCAGCATTAACACAGTCCTACGAAGTCGGGTGATGCAGCTGATGAGCAGTGGAGTAGAAAATGCACTCACCAAATCAGAGCTGCTGGTAGACCAGTACCTCCCTCTTACCAAGGATGAACTAGAAAAAGAAGCCAAAAAAGTGGAAGGATTCGATATGGTTCAGAAGCCGAGTTACTATGTTAGACTGGGATCTCTGTCCACCAAGCTGCGCTCACGGGCCTACCAGCAGGCCCTTTGTAGGGTTGAAGAAGCTAAGCGAAAAGGCCAGGAGACCATTTCTCAGCTCCATTCCGCCTTCAACCTGAGTGAACTTGCCAGGAAGAATGTGCATAATGCCAACCAGAAAATTCAGGATGCTCAGGATAAGCTCTATCTGTCCTGGCTGGAGTGGAAGAGAAGCATCGGCTACGATGATACAGATGAATCCCACTGTGCTGAGCACATTGAGTCACGTACTCTTGCTATTGCCCGGAACCTGACTCAGCAGCTCCAGACCATGTGCCACACCCTCCTGTCCAACATCCAGGGGTTACCACAGAACATTCAAGATCGGGCCAACCACTTGGGGGTGATGGCTGGTGACATCTACTCTGTGTTTCGCAATGCTGCCTCCTTTAAAGAAGTGTCTGATGGCCTCCTCGCTTCCAGCAAGGGGCAGCTGCAGAAAATGAAGGAGTCTTTAGATGATGTGATGGATTATCTTGTTAACAACACACCCCTCAACTGGCTGGCACTTGATTTCAGTATCACAGACTTCACATCTGAGACTGATGAAATTCCAGATATTATAGCTTTGGAAGAGGAGGATGGACCAAATCATTCTCATGCTAATGGCCCTGAGCCTTCTCAGGGCAAAATGTTGAATAACTAACAAGAAAAATCTCCATTTGCTGAATACGCAGTTTGTGTCACATTAAACTTCATGTTTGCTTGTGTTCATTCCTGTGGCTTTAGGGATTAATTGTTAGGGGTTAATCTCTTTTTTTGACTACTTGGTCTTAATTGTAATGAAACCCTGATTGACCCAATCTTTTGTAACAGATTCTAGTTCTGCATTATATATTATTTTATATAATTCTTCAAAGTTTAATCATAAAAATGCCTATAATAAAAAATGGGCTCTTGA EMBV3_27717 ACGCAGGGAAGTGATGGCACGTGGCCCCATCGACCTCCGACCGGTCCCGGACCATCAAGA Variant GeneID:512506|RANGRF:NM_001037460:18_cdna 73^196 4 EMBV3_00149 GeneID:512506 19 GENE RANGRF MGC133973 RANGNRF RAN guanine nucleotide release factor EMBV3_07062 TTGCAACTGTGCTTGGTTTACTGAGCCCGGAGTCCTTGTTTGTCAAGGTGCCTTCCTCTG Gene GeneID:785849|DCAF5:XM_002691041:429_cdna UTR3_Alt 2 NULL GeneID:785849 10 GENE DCAF5 WDR22 DDB1 and CUL4 associated factor 5 EMBV3_42745 CTGCGGCAAGGACGAGCCGGGGCGCTGAAGAGCCTGTGTCGGCCGCTCCCACAGAGCCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35246 GGGAAGCCCAACCTCCCCCATTTTAAGCCACCAAGATTGTTGTAATTTGTTAGGGCAGCC Gene GeneID:538631|TUBAL3:NM_001103285:6_cdna Constitutive 2 NULL GeneID:538631 13 GENE TUBAL3 MGC165684 tubulin, alpha-like 3 EMBV3_04354 GGAAAGCTGTGGGAACTTCATCTCTGGCTTCAGATTGTGTTTCCTGATGTGGAACCTGCC Gene BVT0102_044561 + 0 NULL GK000023.2:17135699-17138205 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40523 ATATCTTCCTGTTTGTGCCTAACCTCATCGGGACCCGGTTTGGGGCCATGCTGGACATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19550 GTTCATTTGAGTTTTTTGTAAGATGTTATGGGGGGCGGGAGGAGGGGGCAGAGATAACCC Gene GeneID:516840|SLC43A3:NM_001038126:22_cdna Constitutive 0 NULL GeneID:516840 15 GENE SLC43A3 MGC134127 solute carrier family 43, member 3 EMBV3_16411 GCGTGGATTCGTGCCCATTGCACCTGCCTCCACCCAGAACTACACCCAGGAACAATTCCA Gene GeneID:515122|ABHD14A:XM_002697067:571_cdna UTR3_Alt 3 NULL GeneID:515122 22 GENE ABHD14A NULL abhydrolase domain containing 14A EMBV3_43524 GGTGTCGCATCATCTCACGTCATCACATGAATGGTTGTCAAAATATCATCTCTACTTGGC Gene BVV0102_283505 + 1 EMBV3_32974 GK000014.2:31154011-31695679 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053113 1 XLOC_031655 NonCoding TCONS_00053113 XLOC_031655 NonCoding NonCoding - 14:31602723-31667098 - TSS39251 1006 0.944333996023857 2 0.984403641221611 0.000182851657853366 0.000179793083742779 4.70816232719521e-05 0.000173347579146466 0 2.84457599832503e-05 0.000127532895455684 0 0.0001555157250479 0 0 7.10872519607959e-06 1.43457844269609e-05 0 0.000199954643403227 0 0 0 1.18569108442688e-05 2.03781332950926e-11 0.000135400284508501 0 0 0 6.85080655071982e-05 0.000220748975263207 3.49452148084564e-05 0 0 0 NM_001035051.3 CHMP3 Bos taurus vacuolar protein sorting 24 homolog (S. cerevisiae) (CHMP3), mRNA. 9e-27 125 70.93 0.285288270377734 NM_024332.3 BRCC3 Homo sapiens BRCA1/BRCA2-containing complex, subunit 3 (BRCC3), 2e-23 114 76.65 0.160039761431412 0 noncoding 0 0 0 0 0.0220276410974516 0.859178948258429 0.0120694032185292 0.826480844084796 GTGCAGAAAGTCTGCGCAGAACCGCCAATTCTTGTACCTTTTTCTGATCCCTCTTCCCCACGCTCCTGGTCATCTGCTGCTTTATTCTTTTTTTTTTTTTTTTTTTTGCTGCTTTATTCTTTATCCCATAAATTCCCCAAACCCTTTGCCTGCGGGGAGGTGGGCTTGAGATGTGTTCTTCCCTCCCTCGCTGGTCTTGCACATAAACCATCTCTTTGCTGCATATCTCTGCGTCCACATTTAACTTGCTGAGTGGCCGAGCAAAAGGAAATAACAGCAACCTCCCGCTAGATCACAACGCCTACGTCATCCACCTCACATCATCTCATCATGCAGGTGTCGCATCATCTCACGTCATCACATGAATGGTTGTCAAAATATCATCTCTACTTGGCAGCATGAAATAGAGACCCAGAATAGCTAATACTGAATACTGAAGGAAAAGAATAAAGTTGAAAGACTAATATTAGCTGACTTCAAGACTTACCATGAAGCTCAATCATAAAGATAGAGTGGTATTGATGAATGATTAGACAAGCTAATGGAACAGAATAGAGATCCCAGAAATAAATCCATATAACTATGATCAACTGATCTTTAACAATGGAGCCAAGGTAGTCTTTTCAATAAACACTGCTAGGACAACTGGACATTCATATAAAAATATCTAACCACAGGCTTCAACAAAAAATAACTCAAAATAGATCATGGGACTAAATGTAAGCTGCAAAACCATAAAACTGCTTGATAATGACAGAAGAGAGAATCGACATGACCGTGAGTATGGTGATGACTTTTAGATGCAATACTAAAGGCACACTCCAGGAAAGAAAGGATTGGTAATTTGGACTTCATTAAAATTAAAGTCTTCTGCTCTGCCAAATACAATGTTCAGAGAATGAAAAGACAAGCCACAGACTGGAATGGAGAGAACACTCACAAAAGACACATCCGATAAAAGACCGCTAGCCAAAATATGCTAAGAACTCTTAAAACTCAACAACAG TCONS_00053115 TCONS_00053116 TCONS_00053117 TCONS_00053118 TCONS_00053119 s 3' 92302 TCONS_00053115 TCONS_00053116 TCONS_00053117 TCONS_00053118 TCONS_00053119 s 3' 28565 EMBV3_13442 CAGACTACGGCACCCTACGTCCTGACATCCTCCTCCATGCCTCATACTTAACTACATCCA Gene BVV0102_279723 + 0 NULL GK000022.2:59877344-59916189 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06526 CATACAGCAACATAGTCGTCACAATCCTGCATCTCCCATCAGCCAAGGAGCGACAGAAAG Gene GeneID:618139|LOC618139:XM_002698956:78_cdna Constitutive 0 NULL GeneID:618139 28 GENE LOC618139 NULL similar to olfactory receptor 212 EMBV3_03484 TCCCTTTCTCTCCCAAGAAAGTCAGATACACTTGGATCCACAGAGGTGAACATTCTGAGG Gene BVV0102_119607 + 0 NULL GK000012.2:21268129-21275898 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038709 1 XLOC_022531 NonCoding TCONS_00038709 XLOC_022531 NonCoding NonCoding - 12:21272799-21273262 - TSS28210 463 0.138228941684665 1 0 2.9385961171506e-05 0 5.99610770577639e-05 1.79354943186495e-05 0 0 0.000113359552750411 0 0 0 2.96654514279288e-05 0 0 0 0 0.000171133709745578 0.000322723353087779 5.41918157747912e-05 0.000402686657986599 0 0 1.60273717069005e-05 0 0 0.000239429153201123 0.000182603921884586 0 0 0 0 XM_005266254.1 WDFY2 PREDICTED: Homo sapiens WD repeat and FYVE domain containing 2 (WDFY2), transcript variant X1, mRNA. 5e-26 122 77.92 0.326133909287257 0 noncoding 0 0 0 0 -0.105449816535548 0.561044455327335 -0.0543001049058385 0.411241052022515 CCTTGTTTATTTATAGTGGAAAAGATGTGGAAAGGAGATTAAAAGCCTTGAGGAAAAGTTGAATTCGATAATCATGCTTAAGATCCCTTCCAATCTGTGATGCTACGATTCTATGACTGTTGTTACTCACTGGACTAACCTGACCATTACCAGTGACCTGCCTGCTCGTGGCTGACTTAACTCAGGTAAATGGGAGTGTGCCCCACTGCCTTTGTCTGGTGTCACATCAAGTAAACCGCTGCCTGTATTTTCCCATCTAGAGCCCAGGAGGTTTGAAAAAGGTTGGAGAAGGCAGAGGTCAATCATGGTACCATCTCATTAAAAACAGATACCTCAGAATGTTCACCTCTGTGGATCCAAGTGTATCTGACTTTCTTGGGAGAGAAAGGGAATAAATGCAGGTTGGCTTAAAGGTTAGATTTGGAATGCAACCTTGATATTTAGGATCCTTTCTCCTCCCCCG TCONS_00034790 TCONS_00034792 TCONS_00034795 . 3' 210 TCONS_00034790 TCONS_00034792 TCONS_00034795 . 3' 672 EMBV3_41756 GGATTCTCTACCAGAAGAATTTTTTGTGAGGCATCTTCCTCTGGAAGAGCAGGCTACAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33382 GGGATCAGTCCCGACTCGCCCCAGAGATCATCACAGCCACACAATATAAAAAGTGCGATG Gene GeneID:786652|LOC786652:XR_084636:298_cdna Constitutive 0 NULL GeneID:786652 21 PSEUDO LOC786652 NULL similar to Tyrosine-protein kinase SgK269 (Sugen kinase 269) EMBV3_16600 TTACGGAAAGAAGGAACATAGATGGGCCCTCCTTAAGTGGAGGCAGGCAACGGAGGCCGT Gene GeneID:781085|LOC781085:XM_002687071:223_cdna Constitutive 0 NULL GeneID:781085 4 GENE LOC781085 NULL hypothetical LOC781085 EMBV3_37164 TAAGCTCCTGGCGTCTAAGGTGTAGGAGTTCATCCTGCTGTGTGTTTTAGAATCCCTCCC Gene GeneID:404148|PGAM1:NM_001034054:63_cdna Constitutive 0 NULL GeneID:404148 26 GENE PGAM1 MGC128234 phosphoglycerate mutase 1 (brain) EMBV3_23034 CCTCTGGAAATGGGTATCAGAAGATTTGGCCTTAATATATTTCCAGTGTGACCAGCAGGC Gene GeneID:282120|VDAC2:NM_174486:233_cdna Constitutive 0 NULL GeneID:282120 28 GENE VDAC2 NULL voltage-dependent anion channel 2 EMBV3_05792 CCTCCACAGTGACCCCCAAAATGCTGCTCAACTTCTTTACCATGAGCAAAATGATCTCTC Gene GeneID:783917|LOC783917:XM_002683600:2_cdna Constitutive 0 NULL GeneID:783917 1 GENE LOC783917 NULL similar to olfactory receptor, family 5, subfamily H, member 2 EMBV3_10578 CACAAGCCCTCTGATGAAGTACGACCACTGTGTGCAGGAGAAGTACCACTGGGTGGAGAA Gene GeneID:532399|NT5C:NM_001046322:425_cdna Constitutive 0 NULL GeneID:532399 19 GENE NT5C MGC134470 UMPH2 5', 3'-nucleotidase, cytosolic EMBV3_29142 GGACCATAAACATGGAGATTGAACCAGAGGCAAATTATGGGGAAATCAGAATAACTGAGG Gene BVT0102_417896 - 1 EMBV3_17166 GK000028.2:41979530-42075888 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159750 TCONS_00159754 TCONS_00159755 TCONS_00159746 TCONS_00159747 TCONS_00159752 TCONS_00159748 TCONS_00159753 TCONS_00159749 TCONS_00159751 1 XLOC_097494 Coding TCONS_00159750 XLOC_097494 Coding Coding FAM35A 28:42057151-42096559 j TSS119647 3235 1 TCONS_00159750_3 906 0.0327666151468315 9 0.91813637171061 0.00200874124472324 0.000521174690616977 0.00268317121418059 0.000856065146826849 0.000927844362731951 0.000149454524515423 0.00143934594415554 0.00129953122846777 0.00126048682260973 1.27118840298836e-81 2.5762887077902e-09 7.25756213801825e-05 2.68131760140059e-05 0.000414410613992361 0.000507710759704283 2.18553522159516e-08 3.52025883955822e-21 2.06466367038586e-08 0.000425102193913541 0.000476330837517599 0.00104014599823882 1.63171040676498e-23 7.08513204766503e-09 1.80823512624144e-18 0.000365306854200461 0.0017753923477864 0.000734082534121144 2.68373963785995e-05 9.53172091954423e-13 1.07823577825141e-12 XM_005226547.1 FAM35A PREDICTED: Bos taurus family with sequence similarity 35, member A (FAM35A), transcript variant X4, mRNA. 0.0 5205 99.90 0.894281298299845 XM_005269918.1 FAM35A PREDICTED: Homo sapiens family with sequence similarity 35, member A (FAM35A), transcript variant X1, mRNA. 0.0 2830 80.59 0.937557959814529 TCONS_00159750_3 sp|Q3UEN2|FA35A_MOUSE FA35A_MOUSE Protein FAM35A; 0.0 1096 63.88 0.984547461368653 0 coding 1 1 1 1 0.0280998072776601 0.896175272819177 -0.00921312943364461 0.890346074855897 AATGACAATTACCTAGGGAGTGAGTCCAGAGAGAGACCCAAGTACTGGGCCGCTGAGCGAGAAGCTGAGGAGACGAGGAGGAGGCAGCAAAGGAGACTGAGAAGGAGCATATGAAACTATGAGTGGAGGATCTCAAGTTCACATTTTTTGGGGTGCTCCAGTCAGTCCACTGGAAATGACAGTCTCACAGGAACCAACTTCTGTAGCGTCCACTGCTGAGACCTGGAAAGAAATTCAGGTTTTGTACAATCACCATTCCTTATACCTGAAGGATGAAAAATGCAGGCACAAAAATCTTGAGGACTGTCAGGCCCTGGAACCTCTGGGCCTTCCAGATCTTCCTCATGGTCATTTTCCAGCAAACTCTATGAACAGATCTGTTCACATGAAAGATGACACCACACATCGCATTTCTGAAGCACAAACTGTAAAGTCCCAGAAGGCTTACCCCTTGGGAATGAGTGACAGAACCAGCTCCAGTGAGCAAGTACGTGGATTTAAGGGAGGCGTTCAGCATTTTACTGAAGAAGAAAAGTATCAAAAGCTTTCCAGTGAACTTAAGAAAACCAGAAACGAACAGCATGATCAATCAAACATGTGTGGTCAAAACATTCCAAAAAATCCCTTTCATTTAGCTCATAAGTGTGCAGCTATATTGGATGCGGTCTGTGGTGCTGAGCAGACTAACACGCCAGAAGCCATCAAAATAAACAGTGCACCAGCAGAGCATCATGAAATACAGAACCAGTGTCTGGAGTTCTTTCTCGCTAACACAGGAGACAAACCAAGGCCTGAAGGAACAGTAGGGAAGGCGTCAGGTGTTAAAATATCCACTGACACTGAATTTCTTAGTATAATGACCTCCAGCCAGGTTGCTTTTTTAGCTCAAAGGAAATATAAAGGGCAGAAGTCTATAAATAAAGGGACCATAAACATGGAGATTGAACCAGAGGCAAATTATGGGGAAATCAGAATAACTGAGGACAATTTGATTCAGTCCAAAGATGATTCTGCAGGAGGAAATGAAGATGGACAGAACCAAGCCTGTTCCCTTGAACTTTTTAGTCCTGTTTGTCCTGAAACAAAAAGTAGCCACACTCTCTTGAACACTGATAAAGATCTTGAAGAAAATATAGGATCTCAAGGACTTTTCAATTGTGATGATAAGTTTCAACCAAATGAGATACTCATTGAGTCATGTAACTCAGGAATACTGTGTTCTCAACTAAATACCTTCTGCAAAAGTTCTGGTAAGAGAAGTTGGACCTCTGAAGATAAATCAGGCCATCCTCAGGCTCTATCTGAAGTCCCCCATGTAGCTAAGAAAATTAAATTGTTTTCTAATGAGAGAGATCATACTGTAACAGTGGACCGGAGGAACATGTTTGGATTTAAGGGCATTAAAAAAACCTCATTAATAAAAAACTGTGATTCTGAACATCAGAAATACAATTGCTTAGTCATGGTGTTATCTCCATGTCACATGAAAGAAATAAATATAAAATCTGGACCAAATTCTGGCTCTAAAGTGCCTTTAGCAACAATTGTGGTAACTGACCAATCAGAAATTAAGAAGAAGGTGTTTCTGTGGAGGACTGCAGCATTCTGGGCACTTACTGTGTTTCTGGGAGATATAATTTTACTCACAGATGTCACTATCCATGAGGATCATTGGGTTGGTGAGACAGTCCTGCAATCAACATTTACCAGTCAGTTATTAAATCTTGGGAGTTATTCATCTGTCCAGCCCGAAGAATATTCCAGTATGATTAGTAATGTTGTACTTCAAGACTTACTGGCATATGTATCTTCAAAACATTCCTATCTCAGAGATCTTCCTCAGAGGCATCCTCAGAAAATGAGCAGTATAGAATTTATAGAATTGGAGCAGCTTCAGCCAGACATACTAGTCCATGCAATTCTAAGAGTTGTTGATATCACTGTACTGACAGAGGCGTTATACAGTTATAGAGGACAGAAGCAAAGGAAAGTTATGTTAACAGTGGAACAGACCCAAGGTCAACATTATGTGCTTGTATTATGGGGTCCTGGAGCAGCCTGGTACCCTCAACTTCAAAGGAAAAAAGGTTATATTTGGGAATTTAAGTATCTTTTTGTTCAGCGCAATTGCATCCTAGAGAACCTAGAATTGCATACAACACCATGGTCATCCTGTGAGTGCCTGTTTGATGATGATAGAAGGGCAATTACATTTAAAGCAAAATTTCAAAAAAACACACCCTCCTTTGTGAAGATGTCAGATTTAGCAACACACCTAGAGGAAAAGCGTTCGGGAGTGATTCTAATGAAAGCCCAGATTTTAGAGCTAGTGTTTCCCATTGCAGCAGTTCAGAAAATAGCTCTAAATGCTCGCAGTTCTCTGAAGAGTATTTTTTGTTCTCTGCCCAATATTATATACACTGGCTGTGCAAAATGTGGATTGGAACTACAAACAGATGAGAACAAGATCTACAAACAATGTTTTAGCTGCTTGCCATTTACTATGAAGAAAATATACTATAGGCCAGCTTTAATGACCATAGTTGATGGAAAATATAAGGTCTGCATCCATGTAGGATCAAAGCTGATAGAGAAGATTCTGCTCAACATTTCTCCTGACTGGCTCAACAGAGTAATAGCCCCTCCCTCTGACGTCACCTACGGAATGGCCGCCGCGGACCTGCTCCATGCCTTGCTGGCGGGCAGCGGGGCGCCTTGTGTCCTGAAGGTGCAGAGCCTCTTTGTGTTAGATGAAAACAGCTACCCACTGCAGCAGGACTTCTCCCTCCTGGATTTTTATCTCAACGACTTGAAGCACGCATCCCATGCTCTTCTCTGAGACCAGAGGAAGAAAATGCAGGCACTTCAAGAGCAGTGAGATGGTTTGTCTTTGGAAATGAACGACAGGGCTTTTGCTCGGGGTTTAAAATAAGTATGTTTTATAAAGAGAACTGTGCTAAATACATTAATTAAAACTCCCCCCCCCCCCTAAGAAAATTCTGTGAAGTTTATTGTTCGTTTATTTTTTGGTCTTTCCCTTTCTTGCTTCTAGAGAAATCTGGCAATGAGGCAACATCCAGCAGGTCATTAGGATTAAGTCTCTCTGTTTAGTCCCTGCTCCATTCTGGGCACTGTCCCAAGTACTGAGACATGGACCTGAGGAATTGCTTTTCTGTATGGTCACAAACTTAATTTTTTTTCTTACTCCTTCATTAATAAACTGTAGACATGACAT EMBV3_01091 GCTCTTCCGAGATCTGGTGAGTCTGCAGGTGCCAGACATGACCATATTGTGTGATCCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36240 ATGTGCTTCCAGATAATAGTGGTCCATGTCCTTCGGAGTAACTGCCTGTTGCCTCTGCTG Gene GeneID:532844|ATP1B3:NM_001035393:51_cdna Constitutive 2 NULL GeneID:532844 1 GENE ATP1B3 MGC127417 ATPase, Na+/K+ transporting, beta 3 polypeptide EMBV3_28129 CCAGGACAGAGCATTTGTGTCATCGATGAGGTGGAAGAGATCAGAACCCGAAAGGACGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05961 GGAAACACATCTTTACACACTGACAATAAGCTACCTGCTGTGGGGAGTACACGCTGACTC Gene GeneID:493713|NR1I2:NM_001103226:41_cdna Constitutive 0 NULL GeneID:493713 1 GENE NR1I2 MGC154979 nuclear receptor subfamily 1, group I, member 2 EMBV3_31718 TGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCGGAG Gene BVV0102_110607 + 0 NULL GK000002.2:75408759-75992884 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218428 TCONS_00175509 TCONS_00166913 TCONS_00238581 TCONS_00035449 TCONS_00104274 TCONS_00222867 TCONS_00061482 TCONS_00165977 TCONS_00104280 TCONS_00071091 TCONS_00253740 TCONS_00040258 TCONS_00148960 TCONS_00250903 TCONS_00176420 TCONS_00031886 TCONS_00127738 TCONS_00004714 TCONS_00251792 TCONS_00174808 TCONS_00167520 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00250681 TCONS_00061491 TCONS_00030963 TCONS_00023661 TCONS_00087263 TCONS_00174805 TCONS_00060480 TCONS_00023655 TCONS_00147537 TCONS_00061483 TCONS_00171428 TCONS_00207933 TCONS_00174806 TCONS_00252497 TCONS_00188145 TCONS_00115209 TCONS_00232824 TCONS_00251680 TCONS_00002600 TCONS_00000529 TCONS_00198820 TCONS_00179681 TCONS_00056145 TCONS_00220566 TCONS_00118459 TCONS_00061487 TCONS_00118040 TCONS_00060481 TCONS_00061484 TCONS_00210913 TCONS_00124997 TCONS_00009083 TCONS_00161488 TCONS_00166887 TCONS_00061481 TCONS_00223765 TCONS_00061490 TCONS_00253008 TCONS_00123823 TCONS_00061485 TCONS_00004712 TCONS_00174809 TCONS_00104277 TCONS_00107436 TCONS_00198299 TCONS_00078426 TCONS_00087262 TCONS_00004713 TCONS_00205125 TCONS_00061489 TCONS_00125692 TCONS_00061488 TCONS_00061486 TCONS_00250582 59 XLOC_131748 XLOC_105290 XLOC_101749 XLOC_145248 XLOC_020908 XLOC_062340 XLOC_136174 XLOC_036985 XLOC_100817 XLOC_042864 XLOC_156679 XLOC_024074 XLOC_090838 XLOC_153846 XLOC_106198 XLOC_018131 XLOC_077742 XLOC_001092 XLOC_154733 XLOC_104695 XLOC_102356 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_153624 XLOC_017212 XLOC_014328 XLOC_052424 XLOC_036749 XLOC_014322 XLOC_089424 XLOC_103815 XLOC_126448 XLOC_155438 XLOC_114188 XLOC_142307 XLOC_154621 XLOC_000643 XLOC_000141 XLOC_120473 XLOC_109453 XLOC_033948 XLOC_133883 XLOC_072622 XLOC_072206 XLOC_129423 XLOC_076540 XLOC_004639 XLOC_098377 XLOC_101723 XLOC_137064 XLOC_155949 XLOC_075375 XLOC_063346 XLOC_119956 XLOC_047314 XLOC_124587 XLOC_077234 XLOC_153525 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_18820 TTCTCCTCGACATGACTCCCTGCCCTTGACTCCTAGCCCACTTTACCAGCTATAAACCAC Gene BVV0102_128126 - 1 EMBV3_08795 GK000009.2:85918332-85948709 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42323 CAATTCGAGCTGCGCGGCGTCTCGGCGGTGGACTCGGGCAACTACAGCTGCGTCTACGTG Gene GeneID:518955|A1BG:NM_001046243:40_cdna Constitutive 0 NULL GeneID:518955 18 GENE A1BG MGC127797 alpha-1-B glycoprotein EMBV3_22264 CAAGTGGCAGCTACTGAAATTACACGCACCGTGCTTAGGAGGAAATTAAGAGACCAAAGG Gene BVT0102_205034 + 0 NULL GK000024.2:49179664-49193604 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143154 1 XLOC_087576 NonCoding TCONS_00143154 XLOC_087576 NonCoding NonCoding - 24:49190927-49191184 - TSS107365 257 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00348842941663353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0996643135614926 0.54719879064411 0.0379675418833566 0.466071153130901 GATCAGTCTCTAATATCAAGTGGCAGCTACTGAAATTACACGCACCGTGCTTAGGAGGAAATTAAGAGACCAAAGGGTTGACCTTGCAAACTCAGTCTATTAAGTATCAGCAAGTACCACAGCTCTAATTTATGGCTCTTGGAAAGCAGTGACTCAGTTATGTAGAGAACTGAAATGCCTGAGGCAAGACCCCAGCGGCACAGAACCTAAAGGACAGTATGTTGCCTAAAGAATGATATATTAAGAAACTTAGGGCC TCONS_00140462 TCONS_00140463 TCONS_00140464 TCONS_00140465 TCONS_00140466 . 3' 1755 TCONS_00140462 TCONS_00140463 TCONS_00140464 TCONS_00140465 TCONS_00140466 . 3' 2011 EMBV3_10958 GGCACTGGTGGCGGGACTCGATCTGGAAAGCCTATGACCTTCTACTTTGGCTTTAAGAAC Variant GeneID:518976|SLC31A1:NM_001100381:32_cdna 79^236 2 EMBV3_23826 GeneID:518976 8 GENE SLC31A1 NULL solute carrier family 31 (copper transporters), member 1 EMBV3_26501 AGACTGCTCCTAGAACCCACTCTGTGCCAAACCCGCTCTCTTTCAAAATTCACTGTCAGA Gene GeneID:539683|KRT75:NM_001076917:48_cdna Constitutive 0 NULL GeneID:539683 5 GENE KRT75 MGC151863 keratin 75 EMBV3_19389 CATCCCCCTCATCAGCAAGTGTGGCTCGTACCCCCCAGGACCTGGCTGTGGCCTACCTGC Variant GeneID:515742|TMEM150A:XM_002691366:221_cdna 399^685 7 EMBV3_09408 GeneID:515742 11 GENE TMEM150A TMEM150 transmembrane protein 150A EMBV3_09894 GAGCAAACACATGCTCACACTTGCACATTCACACATAGACCTCCCTTTCTAAGTACCGCC Gene BVT0102_191555 + 0 NULL GJ058422.1:53412-116595 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16756 CTTGACCCAAAGCAGGAACAGCAACTGTTTCGGCGCCTGGAAGAGGAGTTCCTAGCCAAC Gene GeneID:518935|GAS2L1:NM_001083698:62_cdna Constitutive 0 NULL GeneID:518935 17 GENE GAS2L1 MGC140405 growth arrest-specific 2 like 1 EMBV3_33221 CCGAATCCGGAAGAAACCCAAGGCTTTTCCCTACAGGCGGGAGCACAGTCCTGGAGATCT Gene GeneID:100337359|LOC100337359:XM_002699203:92_cdna Constitutive 0 NULL GeneID:100337359 29 GENE LOC100337359 NULL roundabout 1-like EMBV3_08260 AGAAGTATTCAAGTCCAAACACGTGCGTGAGCTGCAGTGTGGGCACAGGCTTCACAAGGG Gene GeneID:506569|TTC3:NM_001109767:12_cdna UTR3_Alt 2 NULL GeneID:506569 1 GENE TTC3 NULL tetratricopeptide repeat domain 3 EMBV3_25292 ACCATGAAGGACGAGGTAGCTCTTCTGGCCTCTGTCACCCTCCTGGGCGTCCTGCTGCAA Gene GeneID:511749|LTC4S:NM_001046098:16_cdna Constitutive 0 NULL GeneID:511749 7 GENE LTC4S MGC136991 leukotriene C4 synthase EMBV3_21369 GGGGCCAGTTCTAGCTCATCCGGAGACCTTTACAGACACTACTGATTTGTCAAAACTCAC Gene BVT0102_143933 + 1 EMBV3_00372 GK000012.2:34638186-34673860 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24110 CACATCACCTAAGACAGTGCTTGTTTTACTATGCTCTTCTCCCTCCGTCTGCAAATTCAG Gene BVT0102_114785 + 0 NULL GK000014.2:24977097-25007290 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053009 TCONS_00053014 TCONS_00053010 TCONS_00053016 TCONS_00053013 TCONS_00053007 TCONS_00053012 1 XLOC_031625 Coding TCONS_00053014 XLOC_031625 Coding Coding PLAG1 14:25000457-25052456 j TSS39205 8432 1 TCONS_00053014_2 417 3 0.837897611446594 0.00143883230491193 0.00174766767479923 0.0013279540903057 0.000363492837790063 0.0011041331129474 0.000193139359638825 0.000271539993582623 0.000507262639486571 0.00183070866216874 0.00069459739930958 2.02113196182569e-07 0.000164621559970897 7.92469693195311e-06 0.000589617352959262 0.000768386245330063 3.99400456864475e-18 5.36140575496714e-11 9.59273330991515e-05 0.000908766991920961 0.00027457919065101 0.000502591840951567 1.8501219200388e-08 9.80005613202447e-20 1.51621116840593e-07 0.00144256430567736 0.00106812861315519 0.000707783334191789 5.1359855056107e-09 2.64636786800785e-18 3.06941909757544e-38 XM_005215434.1 PLAG1 PREDICTED: Bos taurus pleiomorphic adenoma gene 1 (PLAG1), 0.0 1.506e+04 100.00 0.99027514231499 NM_001114635.1 PLAG1 Homo sapiens pleiomorphic adenoma gene 1 (PLAG1), transcript 0.0 6448 80.70 0.820801707779886 TCONS_00053014_2 sp|Q6DJT9|PLAG1_HUMAN PLAG1_HUMAN Zinc finger protein PLAG1; 0.0 761 94.50 0.997601918465228 4 coding 1 1 0 0 -0.00720141142179363 0.948709074881219 -0.0387082132759138 0.65077750928322 CCGGGGGAGGCGGCGGCGGGCGCGACGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCTGCAAGTTGGGCTGCAGGGGCAGCGCATACACTACAATGGCTGCTGGAAAGAGGCGTAAGGAAACAATTTCCAGGCCCGCCGCGTCCAGCCCGAAATATGAGAAAAAAATTATTAGAAATTCCGCGGGCGGTGTAAAGGCGGCGGACGGGCCGGAGGGAGGATGTTAAAGCCCCGCGGTTGGCCAAAATGGGAAGGACTGGATTCCGCTCTCTTCCACGAAGAGTCAATGGGACTGGCTAAGATCAAGGTCTGAGGCTTCGTCCATCCATCATCAGGCACATGGCTACGCACTCTCCCGAGAAAACCCACAAGTGTAACTATTGCGAGAAAATGTTTCACCGGAAGGACCACCTGAAGAACCACCTGCACACACACGACCCCAACAAAGAGACGTTCAAGTGCGAAGAGTGCGGCAAGAGCTACAACACCAAGCTGGGCTTCAAGCGGCACCTGGCCCTGCACGCGGCCACGAGCGGCGACCTCACCTGCAAAGTGTGCCTGCAGACGTTCGAGAGCACCGGCGTGCTGCTAGAGCACCTGAAGTCGCACGCGGGCAAGTCGGCAGGCGGCGTGAAGGAGAAGAAGCACCCATGTGAGCACTGCGACCGCCGCTTCTACACGCGCAAGGACGTCCGCCGACACATGGTGGTGCACACGGGAAGGAAGGACTTCCTCTGCCAGTACTGCGCTCAGAGGTTTGGGCGCAAGGACCACCTGACGCGGCACATGAAGAAGAGCCACAACCAGGAGCTCCTGAAGGTCAAGACGGAGCCCGTGGACTTCCTGGATCCCTTCACCTGCAACGTGTCGGTGCCCATCAAGGACGAACTCCTCCCGGTGATGTCGCTGCCCTCCAGCGAGCTGCTGTCCAAGCCGTTCCCCAGCACGCTGCAGCTGAACCTCTACAACACTCCGTTCCAGTCTGTGCAGAGCTCGGGCTCTGCCCACCAGATGATCACCACCCTGCCTTTGGGCATGACGTGCCCCATAGACATGGATGCTGTCCACCCCTCCCACCACCTTTCCTTCAAGTACCCGTTCAGTTCTACCTCATACGCCATCTCTATTCCCGAAAAAGAACAGCCCTTAAAGGGGGAGATTGAGAGCTACCTGATGGAGCTGCAGGGCGGCGTGCCCTCCTCCTCCCAGGACTCTCCAGCATCCTCGTCCAAACTGGGGTTGGAGCCGCAGCTCGGGTCCCTGGAGGACAGCACGGGGGACCTCTCCCTGTCCAAAAGCTCCATCTCCATCAGTGACCCCCTGAACACACCAGCATTGGATTTCTCTCAGCTGTTCAATTTCATACCATTAAACGGCCCTCCCTATAACCCGATCTCGGTGGGGAGCCTGGGGATGAGCTACTCCCAGGAGGAGGCACACTCTTCAGTGTCTCAGCTCCCCCCGCAGAGCCAGGACCTGCCGGATCCTGCCAGCACCATAGGGCTGGGCTCTCTGCACTCGCTGTCCGCAGCCTTCACCAGTAGTCTGAGCACGAGCACAACCCTGCCCCGTTTCCACCAGGCTTTCCAGTAGAGTCCCACGGTGCGCATCGATGGCCGAAACGTACGTGCAGCCCTGCCTTAGCTGACCGTTCTGGTTGTAGTGCCTACTTTAAGACAGTATCACAGTTTCTGCTTCTGTATAGTACCAATTTTCATTAAGCCAGTATAAAATAGAAACTAGCTTTTTAAATGAGCTACAGAACCATTTGTGTTCAGCTATGTTTACCTGGGTATTTTGTCCTGATTCACTGCCAACTGTCATATTTTAAGACGATTTCTCACATAGGAAAGCCATTATTAGCAGTCAAGTCTTACAAATCCCATGTTCTGACTTACTGTTAGATCTTAAACTTTGCATTTTTGTCCGAGATCAATGGCTCTACCTTTTGACATTTGGCTCCTTAAAAATTTTTGCTACAGAATGTAAGTTTTCTAAAACGTACATGAACGACCTGAGAGTTTAAAAAAATTTTACTAGCCTCTAAATGGATTAATAAGGAAATGCTTCAAATGAATTTAGAATCCAGTCTGGGGACATAGCATATGTTTCTTAGATATAACCATAATTTCAGGTCAGTATATTTTGAAGACTTGCTATTGTCTGGCTCAAATGTTTGCTGTCTTTTTTATGCACATATAAGAAAAACAAGTCTAGACACAAAGCGCACCAGTATTTGTAGCAAACACACCCCCTAGGAAGGTGACACGGCAGTCCATGTTACTTAAGAGTTGGCCTTAAATTAGTACACAGGATGTTTGCCACGTTTTATCCTTGTTGCTGTCTTTCTTGCATTCATGCTAATAGTTTATGGCGTCAAGAGTATTCAGCGTCAGTCTTTAGGTGCATCTCTTTCATCTTCTCCATCTTTCATGGCCAGAGGGTAGGTCGAGGACAGCCAGCCACTTCCCTTGGCTTCTCACTGCACAATTGGTCCAGAGTCCACAGCTGTTGGGGAACACAGGTGTGCTTATCCCAGGGGTGGGGCTGTCCCATCTTGTAGGGTGAGAGACCCCAAGTAGAGAGACCAGTGCGAGACCTGCCACTCTGCTAGGGACTTGTCTGGGGACCACGTCCCCTGTTGCCAGGGTGGAAATGAGGGGTCAAGTCACAGCATATCACTTACATCACTCTTGCTCCCTTTGATTCAGTTTTCTCTCCCTGAGCACCAAAAGCAGAAAACAGAACAACCCGGCTCACCAACCACCACCACCCCCCGCACTGTGGTATCTTTCTCATTCAGTGTTTTTTTTTTTTTTTTCCATTCAGTGTTAATTCATTTTTCCCTGCTGTTTTTGGACAGAGACTTTAAAGTTAAATGCATTCAAAAACTATTTGAGGAAAGATCACAAAATTTAAGTGACTAAAAGTATATACAGTAAACCCCACTTTTACAAGTCCCTGGGAAAGTGGGAGGGACATCACAAAGAAGCTGAATTTGCAGACGGAGGGAGAAGAGCATAGTAAAACAAGCACTGTCTTAGGTGATGTGAAAAATAACAAGAGCGTGGTGTTCAGTGAATACAGTAGTTATTACAGGCTTTCCTCACTTTAGACAACCAGCACATTTTCTCAAAGGTCAAACTATTATTCTATTTTTCTAATAATCGGTTGGGGCGTCAACCTAAGAAACATATCTTATTAAGCACTTGTTAACACCTTATTTGGGGACCCTGTCTGTCGGGGTGGGTTTGAGGAGGGAGGGTTTATAGAAGAGTATATATCTCTTTAAAAAAAAAAAAAATATTTCTGAGCACTCATGAGCCCTGTGTGGAAGGTTCTCTTCCCTTTGACAGGGCCAGCTATCACTGCGGATTTCCATGTTTACCAAGAAGTTCTAAAGATGAGTGCAGATTACTGAATATAATACATTATTTAAACTATTGGGGAGTAGTATAATTTGTGGAGAGATGTAAATTGTAATAATGTAAATGGGGTTTCACTATATATTATATATATGTACACACACGTGTATCGCACTTCATAGAATCAGAGTTGCTCTCGTACGGAGCTTTGGCTCCAGTATTTTTATCATGCTCCTATTTGTTTTTGTTTTTTTAAATCCCAGGAGCAGTAGTTTTTATACGTATGTATTTAAATTTTATTATTAAAAGTTACATTTTATTAAAAAAGTGTGTTCCAAAGGCATTAAAATTATATATGTTAATAAGGAAATACATTTAAAAATTTTTCAAACTGCTCCTGAGCGTTTGCCTAGGAGACTGTTTGCTCTCAAAGTAGGCTTTTAGCTCTGCTGTGTTGCTGCCCGCTTTAGTTTCTATGAAACAGATTGCTTACTTAAATCATTAGTTGAATGATTAGTGTTCAATATTGCTTTAATCACCGTCGAGAGGAAAAGAAAAAAGAAAAAAAATTTTGGTGACAGAGCACAAATAAATAGAAAACCTGTTTTTAAATAGAAATCACAAATCACAAGTGTGGAAGCACTACTTTATTTTTGTCTAAAATTTGCTTAAAGAGAAGTCAGATGAACGAACTGAGATGTTGGCCTTTTCGTGGGCTGTATTTCACTGCTAATAAAAAAGTAAAAAGGGAGTACCAGGATTTATTAAATAAAGCATTTTGGAAATGGGGAATGGCGCCATGTAGGTGTATATATATATTTTTAGCCTAATTCTCGCCCAGCATACCTTCCAGGGCACCAGGGCTGAAATTGTGGACTCTATTTTCACGTGTACACACCCCTTTGCCTGTTGCTTTCCCACAGACTTGAAATCACACTTCCAAGTAAGAGGGAATTCTGCTCATTCATTTTTTAAACTGACTATAGTGGTCACTAAACCCCCTTTGAGAGAATCTCTATTAAACGTGAGGTAGACTCATTTTATTTTAATTGCACAATGGTCTGACAAGGCTGTAACACCGAACTGGCTCTTTTTTTTTTTTTTTCCTTAAAAAGAAAATTGACACTTTTGATGTCAACTGGATGTGATTAAAAATAATGATTGCCAATTCTGTTTTCATTCTCCAGTGGCCAGAATCATCATCCTCGAAATTTCTAGTAGTGCCTTTGCTTGGGGTTTTTTTTTTTTTTTTTCATAAAGGGATTGTTACTAAGTTAAAAATATTTCAGTTTAGAATTTGGACCTCAGACAAGATACTGAACCTCATTCGGTTTGACCTTCCATGTGTTTGTACAAATTAAGGTCACCAGATACCGAAGCACGAGCACGGAAGGATACTGACACTATAAGCAATATTCTCCGCGGATGGACCCAAACATCACCTTGATAGCTACTGGTCACTGCTACAACGTGCATCTTAAACCCCTGTTACCGAGTTCCGTTGTTCATGTCCTGACTGATACGCGCTACTCCTTGTGCAGCTTGTTAATTTCATGTAGGTGTTTCTTCCAAACTATGTATTTTTGCCGATGTGTTGCTTGTGTTTCATTCTTCTTAGTCACTTGTGCAACATAGTGATATATTGTGTTGATTTGGACAGTAGCGGTTTTTAAAAACCATATACTGACTGAAAACATGAGCCAGAGCTGACTGCTTTATTAAGCTAATAATGAATGTTAAAGAGTACATATTTTCAGGATTATTCATCTAGTAAGCAATACACATATATAGGCCAATATTTTTTTAAAAAATAGAGCTTGGTCAACCTCTATACTACACATATTACAAGATATAGCACTTTCAAAACGAATCTAAACCTTTACAGAAAAACTTTCTTATAGGTTATGCCTTTTATTTTAAGACTTATTATAATTTGTTTCAAGTGCCATTAGAGGATAGATATATAGGCCTTTGATGTATAATGCTTTGTGTTCAAGAATGGTAGACGGTATTTTAAACAGGTACAGTTTTACAGTGTTTTCTTATCAATTTGCTATATTGCACAGAATCAGTGTGTCTTTTCATAAGGTTTTACAATGGTTTATTTTTTTTACAAGGTTTACGTGTCTCAAAACACACTGTCTTCCCAGTATGTAAGTTAAAATACAAAAAAAAATATTGACCCAAGTTGCTTCCAGCCTACTGAGATCCAGGCGACATTGGAGGAGATCTTTTAGACGTCATGTATTCTTCATTAGCAATGGCAGACTGTTACCTCTGAGAAGTGAGTGCCTACGTTGAGCCCTTGTCTTATTTTTCTCACGCTGTGTCAGCAGCCACATCAATCACACAGATGGTCTGTGGTGATCCCATAGATCCACGTTAGGCTGTGTTGTGTAGCTCTGTGCTGAGAACCCATGCAGAGCTCCCTTCTGATCCATCCAAATGGATCCTTTCTTACACATCCAAATGATACGACCCACAACGGGCAAGGCACGTTCCTATCACCCCCCGGCCCTTCTGCAATATTGTCAACCTCTGAGGTTGGAAGGCAGTGTCTTTTGATAAGTTACCTAGCTTAGAAAGGACAGAACTATTGCTAATGTGTAAAACACTTCATTGTATAAGCTTCAGTGGTACAGATGACCCAGAATGAATGTGTATCTTCTCAGAAACACTCCTTCAATATTCTGTCGGATCATGCTGCTAATGTAACTTGGGATACAACTCTTCATGGTGCTACAGACTTCTCTGTCTCGTTCAGTCGTATTTTTTTTTTATCCATAGGAAAAAAAAGGACTACATTAGGTGTAAAGGTGTACAATATATTTTTATACTGTGACTTCATTTGTCTTTAACAAGACTTTTACACCACCCACCACAATGTATTCATGTGCACTTGCAAAAGGAAACCTTGGACGTGCAAATGTTATACCAGAACAAACCCAGCTTTGTCCACAAAGGTGACCGTGACTCGGAAAGAAACATGGGCTTTATAATATGGTGTGGAGTGAAGAACATGCTGTACGTTACTAACAGCCCTTTGAATTTAACAAAAACTGGGCATCCATTCGGAAATGGATTGCATCATGCCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAGCTGACGAAAAAGTGTTTGGACTAGTACTCTAAAAATGTTCTGATGATAAAGTTTTGAGTCAAAATAGAAAAGAGAAACTGCATTCCAGGCTGCATTTTGTATATTTTTATTGCATTTAAAATTCGCTCTTCTGTGATACCGGGAAATCAAGTGGCTTATCCTGTATATCATGTACTTAAAATGTATTCACAAACTACTGTTGTGTTTGTATAAAATATAGACAAAGATCATATTTTCTGTGTGTGTATAAGCTCTGTAAAATAGCAATCACATTATGAAGCTGCAGCAAGACTACATTTTAAACATCCACATCCAAAGAAGCAGGCTATTTATTGTCCAGTTACCCAGTTATAAAATACTCATTTGCTGCTAATTAAACAATAGTACTGCAGCTTCTCATGGCCTACAGTGTTATGTTTGCTGTAAGAAAAAGATATGTGAACTCCACAAAAATATATGAATAAAAATTATAGAATGGCTTTAGATAATGTAGATCTTCCTGAAATTATAACAGATGATAAATTTCTATTTGGTATAACATTTTTTTCCCTTTGAATTTGAAATATTTTCTCATTTGATAAATATAAGATTCTAATAGCTGCCTCTAGGACAATACTTGGTTGTTGAAATGTAAAGTTCTAGGGTTTCTTTTGTTTTGTCTTAACTTTTGTACCTTGAAAGGAAGGATAGAAATTGTAAATAAAAAAGTCAAAATGTTGTGCATCAAAACTTTAATCCAGGTGAAAATTCAAACAAAGAATCTCCCAAAGGCTGTTAGAATGTATAGAGCAATCATGTTTTTATTCATATGAGATAAAATGGGCATTAAGTATTTCTTTGGCACTTACTGTCCATCAGTCCTGTAAATTATCTTTTTAGACGTTCTCTTTGGGCTATTTGTCTAAAACTTGGCTGAAAATCCTCCCTTGACCATTTACCTGGACCAGAGTAATGAGCTCACAGATGTCATTTTGTCTCAAATTCATCAGTTAAACAGTGATGCATCTTTGAAAGAAAGAGATTAATTCTGAAAATCCAGTTAATAATCTGGCCAGGAACCAGTGGCAGGAAAAAAATTTTTTTTGGATTTCTCATAGCACCTCTTTCATTATGATAGGAAAAATTGCTTCTTAACCTTTGACTTTCCTGTCCTAAGGTTCTCTACCTTCAGAAAGGTAAAGAAGATGCACAGTGACTCCCCATTTGGCAGTTCCTCTTTTCACATACCTAATTCCAGCAAATCTAAAAGCATTTCTTTGTTGATTCTTAGCATTAACACTACATACATTTTTATTTAAATTCACGCATATGAAATATTTTAAGGACTATTTATAGAAAGGAAAATGCTATTGCTTTTTATAGTCAGAATACTCTGAAAAAGGATGTTTGGGGTTAATTCACTTAAGGTGTATTCTCCCTTATGGAAAAGCAATTAGAAGTGCAGTTTAAGCAAAGCATTAAGCATAAGCATTGCACCATAGATCCAGTGGGGCTAAAAGACTTCTTCATGCAGGTTTTTGTTAGATGAAAAGTTAGTACTGATGATTTATCATTAAGGGGAGGAAAACTTCAGTCTGACTAAAGACAGCCTGAGTTTTTGCTGCCACTTTTCCTTAAATGAGCATTTCTTAAGCAGAAGGCACCTTTTCATGCGAAGTCCTGGGCTGTTCCCAAGGAGTCAGCTTTACAGAAAGAGGCTGGTTTCCTGATGAACCGTTGCAATGAAGATGACACCATCATTACAACAGTGGGAAGGTGTAAATGCTGTATTGAGTTGTACCCAGTTACCCTTTTTTGTAGATCAAAAATGATCAAATATTGGCGGTTTCAGACTAAAACTAAAAACAACCAAGCCCAGAATGTCTCAACTTCACCTGCTTTCTATTCAACACAGAGGTCAATAATAAATCTGTCTACTGAAGATGTTTGAC EMBV3_23486 CTATTGCCTGTCGCTTCCAAGGCGGTTCCCTCTGGTTATAGCTTCTTCTGTTTGCTGTTC Gene BVV0102_206901 + 1 EMBV3_09433 GK000020.2:2610137-2680573 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15302 GTCCTAAGAGGTCAGCAGTATGGTAGGAGCTGTGATGTATGGAGCGTTGGCTGTGCTATT Gene GeneID:523962|MAP3K1:XM_002696321:56_cdna UTR3_Alt 2 NULL GeneID:523962 20 GENE MAP3K1 NULL mitogen-activated protein kinase kinase kinase 1 EMBV3_08526 TACACTGAAAACTGGACGTTATAACATTAAATAACTTCATTCAGAGGACCAAGCAGCGAT Variant GeneID:532730|SEC22A:NM_001083462:71_cdna 196^359 1 EMBV3_08349 GeneID:532730 1 GENE SEC22A MGC140086 SEC22 vesicle trafficking protein homolog A (S. cerevisiae) EMBV3_40804 CCAGGTGTGTTTCTCCTTGGGTTTATCCTGTATGGGACTCTTTGTGCCTCTTGGGCTTGA Gene BVV0102_254335 - 0 NULL GK000026.2:814263-1088744 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190034 TCONS_00187495 2 XLOC_116069 XLOC_113540 NonCoding TCONS_00187495 XLOC_113540 NonCoding NonCoding - 4:52832388-52833206 - TSS139863 818 1 TCONS_00187495_2 83 0.998777506112469 1 0 0 0 0 0 0 0 7.12923329696025e-06 0 0 0 0 0 0.000294060559027407 1.35138925931062e-05 0 0 0 0 0 9.76830889688764e-07 0 0 5.60760434219235e-06 0 0 0 0 0 0 0 XM_005213678.1 ZAR1L PREDICTED: Bos taurus zygote arrest 1-like (ZAR1L), transcript 2e-46 190 73.10 0.363080684596577 NR_033805.1 WAC-AS1 Homo sapiens WAC antisense RNA 1 (head to head) (WAC-AS1), 6e-15 86.0 66.86 0.415647921760391 0 noncoding TTGTAGATTTTTCCCTTTCAATACTTTAAATATATCCACCCTCCCTTCTGGTCTGCAGTTTCTGCTGAAAGATCTGCTGTTAAGTGTATGGGGTTTCCCTTGTATGTTACTTGTTTCTTCTCCCTTGCTGCTTGTAATATTCTTCCTTTGTATTTAGTCTTTGTTAGTTTGATTAGTACGTGTCTTGGTGTGTTTCTCCTTGGGTTTATCCTGTATGGGACTCTTTGTGTCTCTTGGACTTGATTGATTTTTTCCTTTTCCATGCTGGGGAAAATTTCAACTATAATCTTTTCAAAAATTTTCTCATACCCTTTCTTTTTCTCTTCTTCTTCTTGGAGCCCTATAATTCGAATGTTGGTGCGTTTGATATTGTCCCTTAGGTCTGAGACACTCCTCAGTTCTTTTCATTCTTTTTACTTTATTCTGCTCTACAGAAGTTATTTCCACCATTTTATCTTCCAGTTTACTGACTCGTTCTTCTGCTTCAGATATTCTGCTATTGATTCCTTCTAGAGTATTTTTAGTTTCCGTAATTGTGTTGTTTGTCTCTGTATGTTTATTCTTCGATTCTTCTAGGTCTTTGTTAATTGATTCTTGCATTTTCTCCTTTTTGGTTTCAAGATTTTTGATCATCTTTACTATCATTATTCTGAATTCTTTTTCAGGTAGTTTGCCTATTTCCTCTTCATTTATTTGGATTTCCATGTTTCTAGTTTGTTTCTTCATTTGTGTAGTATATCTCTATCTTTTCATTATTTTTTTTTTAACTTATTGTGTTTGAGGTGTCCTTTTCCCAAGCTTCAAGTTTGAATTCTTTC TCONS_00181625 . 3' 19579 TCONS_00181625 . 3' 20396 EMBV3_06973 TGTGACCACATCCAGCAGAGAGAGGGAAAGATGCTGAGCCCCCATGAAAATGACTATGAC Gene GeneID:537223|SIM1:XM_002690159:23_cdna Constitutive 0 NULL GeneID:537223 9 GENE SIM1 NULL single-minded homolog 1 (Drosophila) EMBV3_00386 GTTGGGTCTTAGCTGTGGCATGTGGGATCTTTTGTTGCGGTGTGCCAGCTTCTCTCTTGT Gene BVV0102_341412 + 0 NULL GK000023.2:45499036-45845634 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11464 CCTGACTGCCTACTATCCAATGTCAGTTAACCGTGTCCTCCCCTTCATTTTCTCAGTCCC Gene GeneID:783373|RAB10:NM_001101288:267_cdna UTR3_Alt 2 NULL GeneID:783373 11 GENE RAB10 NULL RAB10, member RAS oncogene family EMBV3_35661 GAGCCCCGAGTGCATCAGTTACACCAACAGCCTCTTCCAGAACTACCAGAACTTGTACCT Gene GeneID:511273|KIF5A:XM_002687561:586_cdna Constitutive 0 NULL GeneID:511273 5 GENE KIF5A NULL kinesin family member 5A EMBV3_23852 AGTGTTATCAGGTGACGACAGTGCAGGAAGTGAGCCACCACTATCACCCCCAGAAAGGCT Gene GeneID:539913|KCNC2:XM_002687157:51_cdna Constitutive 0 NULL GeneID:539913 5 GENE KCNC2 NULL potassium voltage-gated channel, Shaw-related subfamily, member 2 EMBV3_14420 GCAGAAACTGAATTACAAAGAGCTACAATGGATGCTACCCGAACAACTCGTCATCTGGAG Gene GeneID:614070|FAM92A1:NM_001035442:79_cdna Constitutive 0 NULL GeneID:614070 14 GENE FAM92A1 MGC127958 family with sequence similarity 92, member A1 EMBV3_38929 CAAGACAGTGTGTGCAGTCAGATGCTCTACCCCTAGCAATACCCCCAAGCACACGTAACA Gene BVT0102_031032 + 0 NULL GK000017.2:64494177-64500815 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00948 CTAAGAAGCCTGTTCCCTATATGCTTTGAAAAATTTTGGCAATGTATTTAACTAGAGAGT Gene GeneID:505538|STX12:NM_001101053:78_cdna Constitutive 2 NULL GeneID:505538 2 GENE STX12 NULL syntaxin 12 EMBV3_25194 CAGCCTACGGGGTCTTGGTGCTGCTCCCAGTGATCGCTTTCTTTGCAGTATTGACGATTT Gene GeneID:338038|ATP6V0A2:NM_176637:36_cdna UTR3_Alt 2 NULL GeneID:338038 17 GENE ATP6V0A2 NULL ATPase, H+ transporting, lysosomal V0 subunit a2 EMBV3_28336 AACCTGAAGCACCAGCCAGGAGGTGGCAAGGTGCAAATAGTCTACAAACCAGTGGATCTG Variant GeneID:281296|MAPT:NM_174106:179_cdna 864^956 4 EMBV3_31464 GeneID:281296 19 GENE MAPT MGC134287 tau microtubule-associated protein tau EMBV3_12706 GGGAAGAAAAATGAAAACTCAATCTTTATGTCAGCTCCAAGGTGTCAGGGCATAGAGGGC Gene BVV0102_173124 + 0 NULL GK000003.2:80375750-80491322 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173807 TCONS_00173808 TCONS_00173805 TCONS_00170381 TCONS_00173809 TCONS_00173804 TCONS_00173806 TCONS_00173803 2 XLOC_104446 XLOC_103572 Coding TCONS_00170381 XLOC_103572 NonCoding NonCoding AK4 3:80486447-80491415 x TSS127324 4463 6 TCONS_00170381_10 79 0.107775039211293 2 0.101872357559895 1.94726858265115e-11 0.000238649157253201 0.000422361059663304 0.00178767110428402 0.000979211139274677 0.00029262690592609 0.000282041703028541 0.000580734605984416 2.12298249317996e-63 9.84967828359735e-05 0.000258917154458409 1.89709884666776e-11 3.06918035983451e-05 9.99104025045883e-08 0.000148950986711255 0.00492997145277098 0.00168720111772691 0.00197070949892559 7.46493905119926e-19 3.14260191162392e-132 0.000339080328847094 0.0025909991486751 0.000850301730840223 0.00306814281846469 8.55979339717277e-52 1.6168287126091e-48 1.25717056266952e-72 0.00018915000540307 0.000908735592301761 0.00282944765450355 XM_005204457.1 AK4 PREDICTED: Bos taurus adenylate kinase 4 (AK4), transcript variant 0.0 4194 99.96 0.521398162670849 NM_001005353.2 AK4 Homo sapiens adenylate kinase 4 (AK4), transcript variant 1, mRNA. 0.0 1168 74.34 0.410934349092539 0 noncoding 1 1 1 1 0.0238499954668807 0.855577165327353 -0.010942050452247 0.877492261788303 ATGAGACTGGGGGGGTCATAAATCTTGGATTTGGGGTCTTGCTCTGCCACCAACTATCACATTATCCAGGGAACACTATATTCTCTGTTTTCCCCATCTTCAAAGTGGAGAAAACACTGTTGATAATGGGAAGGTTGCAGAGTGGCATAAATGAGAGCATTTGTGAAGGTGTGTACTGCCAAGTATAAAAGGCTATATAGAAATGTTAAATGAATTCACTAGTTATAAGCAGAAAAAACTTTATTTCTATCAGATTAAAAAGTTTGAATCGATCTTCAAGCCAGATAAAATCATCAATAACACAATTAACAGAGCATGTACAGATTAGACTACAGGTTTAGATACTTTGAATTAAGCACATACACCAAAATCAAGAGGGCTGATAACTTTCACACTGAGGAAAAGCACTGACTCATCGTAAACACACAACTTCTGGGAAAATGGAGCTGACATTTCACAGGAGAGTAAACCAGAGGCAAGTTGTCATTAGGTTAGAGAACTGATTTGAGCTTGAGAGGAATCACAGTGAAATGCCATTGTAATGCAACAATTTCCCAAGATCTACTCATCTCAAAAACAAGAATCTATAAAAATCAGTAGTACAAATTCTCATAAAACTAGGAAAGCCCTCTATGCCCTGACACCTTGGAGCTGACATAAAGATTGAGTTTTCATTTTTCTTCCCTTTATTCTTCTCTAAATGAAACAAAAAACTTTGTCCTTATTTAGCACATTTCTGTCTCAAGAGAAAGGTTTCATGAAGTGATATTAGACACATCAACCCCAGTGAGAATCTTCAAGGTGCAATGCTCTTTTGACATGTGTTTAAACAGGAAATCTTTTATTTCAAGAATGACACTGTGCTTTCTAGAATAGCCTAATTATCACCAAAGAAGGAATGAATATATCCAACACTACCCTTCCCAAAACACACACTACCTTTCTTTCTCTCACACTCACTCACACACACCAATTTAGGGAATTTCCTGAAGCATACAGATAATGACATTTATTTTGGCAAGAACTGTGCAATTTGTTAAAAGAAAGATAAGGTATGGCATTTATCAGCAACTGTAATTATGTCTCAACAGACGCAGGAAGCAAATTTTCCTCACAGTTGAAATATGGCTTCACAGTTCCCCGTCATCTGGGTCTTGCACACGTTGCATCTGCAAACCAGACTGGGTCAGTTATATAAGGAAAGGGACCTTATGACCAGACCACATTCCCACATTAAAAGGCGTCTGTTACTGGGTTCCTCTTCTGAAACACCGAACAGACAAGGAAGTTGCTGAAGATGGAGGGGAATAGAACGCAATTCATACTATAGACATGACTCTATCTTACGAATTGCCTTTCTGGCAAAATTACTGCAGCAAGAAAAGATATTGTCTATTAAGTGAAAAGCAACACATGAAATCCATCAGGTAGATATGAATGCCTCCAGACATCCCGTGACCCAGCAGAGGACAGACGAAACACCGTCCTCTGCATATGCAGTGTGCGGCTACCGCCAGGACCCGCTGATGCCCACTTCCTGTCTTGGCACTAGAGCCAAAAGCAAAGATTCCAGGTGGGAGCAAATACATTGTTTTACCTATCCATGAGAATAGGGAGCTCAAACTAGAGAAACATATTTAAAAAGCCTTTTTGAATTTCCTGATTAATCCCCATATAGGAAAAGGTTAAGTAAACGAGCATTTCAGTTTTAAAACACAAGGAGGCAAGATAATTGAGATAATACTATTACTTAGGCTAATTGTTGAGGATTTAACTAGATAATGGATGGAGTGCACATAGCACCAATAAACAGTGACTACCAAGCCCTTTTGATACCTGAACATACTTGGAAATTTGCTGTCTTTATGATTTAAGCAAAGACTTCTCCCTCCCTTCCTGCTCCCAACACACACCACAAGCGGGTAGTTAAAACTTCTTTAAACAAATAACCGAAATCAGATACTGAACTCAGTTTCCAGTGATTTAAAAAGTATAAAAACTCTATTTATGGGTTTACATAGGCATCTTTCTATCAAAATTTATCCTGTCAACAACCTATAGGGCTTCCCTGGCAGTCCAGTGGTTAAGACTCCGCACTTCCACTTCAGAGGGCACAGGTTCGATTCCTGGTTGGGTAATGTCTGGAGGGCTCCCAGGAGTCTAGGGGAGTGTGTGAGCACCATGGCTGGGGTGGCGCAAGCATCAGGGTCCCTTCAGGGACACAAAACCATGGACACCGAGAGAACAAAGGAGGACCATGAGCTTGCCGCCGCCACAGAGTAGCCTGGACCCAAGCCAGGTCTACTTTGACAGCCTTTCATTTTACTTATGTACAAAAGTAAAAGTCGCTCAGTCATGTCCCACTCTTTGCGACCCCCGTGGACTATACAGTCCATGGAATTCTCCAGACCAGAATACTGGAGTGGGTAGCCGTTCCCTTCTCCAGGGAATCTTCCCAACCCAGAGATCGAACCCAGGTCTCCCACAAAGCAGGTAGATTCTTTACCAGGGAAGCCCTCAATTTACTTATAAGTGAGCAATTATGGATGATCAAGGGCTCAGACTCTCCTCTAGCAGCTTCCTTTGCTTAAGCAAAAGGGAAAAAGGAAAAGGAACACTCTCACACAGAGGTGGATGTCACCAGAGTGAACCCTGCCATTCTGGATGTGAGGCCACTTGGAAATACAAGCAAGCTCAGAGCCCTGTGTTGCTTGGGACAGGATGCAGGTAGTCAACATCTAGGAGCAGAGCCAGGAAGCCCGCGTTCAAGTGTGTCTACACTGCGCGTTGGGAGAAGCCAGGGCACGATGCTTTACTCTGCCGACCCTCGCTTTGTTTATAAGCATGGGATCATGCCTGTCTCAAAGGATGCTGGCAAGATTAAATGAGATGTCTGCAAATGTCCTAAAACTGTACACATATGACACTCAGCAGGCCTTCAATATATGGTACCTATTATATGCTTGCTTTAGTGTTAGAGTATATGAAACACAGCAGTGTTTTCAAGTTCTCAATAAGCAGGAAGCTGGTGGGGATAAGAGAAAGCAAAATGAACGCAGAGCTGGCTAGAATCAGAGAAGGAGGGGATATGTAAGAATTTTAGAAACCACCCAAACTACTCTTTGTGCCTAGCTTCGATGGAACCTCATGTGTGGCAGTAGAAGGAAAACTAAATAGGTCCCTTTAATTTTATCTTGGTCAAAATATTTTCAAGAAAATTTTATTTATTTTAGTGTAAAATCATTGAAGGAAAAGCTAGACTTTGTTGAAGAAAACCAGAAACATTTTTTTTAGGCTATCGAACATCATCAAACAAGCATCATCTTTCAAAAGCCCGTGGGAACAGTGTTTGGCTTTCATTATGGTCTCACCCAGCAAAGGTGACTGCCCTCTACTGCGGGCAACCTCAGAAATAGCACACACTATTGAGAGGCATTGAGCAACACTGACACTGGCTTTAAGTGTCTATTTTGCTGGAAGGGAGAAGGGAGGGGAGGATGAAGGAGCAGAGTATCGAGTCAGGGATCACCTAGGCCATTTCCCATACTTCTTCCCAAAACTCCAAAGGCCATGATTTCATTGGAGCATCTGCTAAACATCAACAGAAGGGAGGAAAGTTTTGAAGATTTTTCTGCTTCCAAAAAAGCACACACTTTCCTCTCCTGAATGATCCCTATAATAACCTTAACTTTCTACTTTTCCTACTTTATGGAAATTGTCTCCATGGCAAAACTACTCTAAATTGTGCAATTTTTCTCAAATAAGACTTGTTTTTCTCTATGCCTGGTTCCCCTGGAAACCTGAGCTGTATCTGCATGTCTGGTTTTTACCCTATCCCCATCAACTGGCATTCAAACACAACTCTTTTCAAAAGTCACTATCATGCACCGATGTTTCACAAATCTGAACTGGGCATTTTAACTGCATAAACCTAGAAAGTAAATAATCTTACTTCACTTGGATTCAGAGGATGAGGAGGAAACTGGTCTGTGTTTCCACTAAGGTAGCCAAAGAACATTCACATGAAGGGACAAAGCGAGAGGGACTGGCCAGAGTAGGGGCAGTATTTGTAGAGAAGATGCATGGCTACCATTCAGAATCCATGGGTCAGTGAATGACTGGAAATTCACTGTGACATCTTCAGAAAATAAATAATGTGTTCCAACATCACCTATGCTGAAAGGCTTTTGTTTTCTCAGCAGTATCAGGAGTTAGACAGAAGTCACTCCTGGAAATACTAAAGGACCCTTGCTGGTACAATCACGATGCATGAAGAGGATATCTATTTTTAAGGCAACAGGAATAAATTTCATTGTCTTTCCCAGAGGAGGGCGAGCATTAGTGGCCACCAAGTCTGGAAACGAGGCAAATCCTTAATAAATGGTTTATTGATGCTACATTCTAATGAATGACAAAATAGTGTGATCTATATTTCTAGACCTAATGGCCATCCTATAGAAAGC TCONS_00173809 TCONS_00173810 r 5' 0 TCONS_00173809 TCONS_00173810 r 5' 0 EMBV3_09354 CTGGGGCCAGCTTCCCAAACAGATGTTCTTTGTCACAACATTACCCCACATCTGGAGACT Gene BVT0102_267157 + 0 NULL GK000013.2:61727285-61745509 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049488 1 XLOC_029619 NonCoding TCONS_00049488 XLOC_029619 NonCoding NonCoding - 13:61743052-61744970 - TSS36664 1918 4 TCONS_00049488_6 69 0.0719499478623566 1 0 0 5.23902086502103e-06 0 0 0 0 0 0 0 0.00102754949327562 0.000313897666471601 0.000477254805207636 8.82625051547916e-05 3.92408541583751e-05 0.000199522178984654 6.88521521457081e-05 0 0 0 0 0 6.57724498814318e-05 0.00017697583341472 0.000332146357429387 0 0 0 3.00474622040776e-05 7.84632878430909e-05 0.000131655155800035 0 noncoding 0 0 0 0 -0.0592072732659618 0.586863117213857 -0.00634142449711025 0.897286361881787 GGTCCACTCCTACTCTCAGGCTCCGGCTACCCGCCATATCCCGCCCAGTCCTTGGCCTCGTCCCGCGCCCTTCCTCGTCTCAGGCTCCCCATTTTCAATCGGCTCCAGGACCTCCCACTGGGGCTGGGAATACGAGTCCGCGACGCTTTGTCCAACACAACAGCCCTCCTTATTTTCGCCTTCGGGTGCTTTCTCTGTATCTCCTCCAAGCTGGGAGAATGAAGGTGGTCCTGCATGAAGTCTGAATTGGGCGAGGGGAGAAGGTCGTACCAATGGGATACGGAGGTCGTGGCTCAGGTCTTTGTGTCTGGGCAGAATCTCAGGGGCTCCCTGAATCTGATCGAGTGAGAGCTGTTCCTTTCTGTAATATGGGCTCCCCCTGGGAGGGTTGGAGCGGCAGAGCCTCTCACCTCCCATTCCAGCTGTTTCCGAAATCTCAGCCTGCATTTACATAGAGGACCCCTTGCCCTGAGTGGGCTGTAATACTCTACCTGGAGCCCGCCTTGTGCCCACCAAGGTTCCCAGGGAGGACTCCTACTCCCTGGCCCTGACACCTCCAAGAGATCTGTTTTACAGAAGAGTCTGACTATTCCCAGGTTCCAGGCCTTGAGACACTGCTGGGCATCAGCCCCCAGAAGGTCCTGCTGCCCTATGTCAACCTTGAGCCGCCTGGAGCCTGCCATCACCCCATCACCCTCAGCCCTGGGGCCAGCTTCCCAAACAGATGTTCTTTGTCACAACATTACCCCACATCTGGAGACTGGAGTTCCCATAGAGGCAGGAGTGGGAGATGGTAGAGGAGAACAGAGGGTCAAGTTCTCTAGATGACTTCTCTTGGGAGGCTTGTGAGCTCTGGGGAAACAGGCTCAGAAATGGCGCTGCTTGGTCGCCATTGAGGCAGCAATAGAGCTGCCACTCACACATCAGCCACTCACTCCAGTGCAACCAGCCTGGAGAGTTCTGATGAGACACCAAGTGTATCCTCCCCAGGCTGCCTGAAGGCGGGTCTTCCCTCTTCTTCTGTCCTTAGGCTTACTCTTCAGGACATCCTGACAGCATCCAAGAGGTGAGGTGATCCTCTTGGGATTCTCTCAACTCTGGAATCCCCTTGATCACGGGGAAGGGGGAGCAGCAGTCTCCAGGAGTAAGCAGGGCCAATCCTGGGCACTGGGGTCGCAGACATCCAGGAGACTCCCACACTGCTTTCTCATCTCGCAGAATGGAGGGGGCCTGCATCCTGCTCACTGGAGGATCTCTCTCTTCAAGGCTCATCTGCCTCCGGAGCAGTAAGCCCCTTCTTCCAGGCAGTGGATAGAGTGGGTCTCTATGGCCTCACTGGGCTACAGGAACCCTGATGGATGGGTGGGTCCTCCACACACCTCACTGGACCAGAGCTTGGACACCTAGAAAGCTTTGGCCCCAGGCCACAGAAGGGACTCACAGCCTTCATCCATCAGTCCAGCATCAGTATTCTAACAATCCCAAGCCACATTTACTGAACTCATGTTCTGCTCCAGTAACCACATCATTCCCCCTTTTACCTTTATTGGCCTCCCGTCTTTAAAATAAAATCTGAGATCCACACCATGACTTCCAAAGCCCTGCTTGGTGTTCCAGTCTCTCTCCAACTTTCTCCTTTGCCCATTACAATCTGACCAAGATGTTCTCTCTCTATTCTATGAACACATCTGTGTTTTTCTGCCTTTGGGTCTTTGTCCAGGCCTCTCTCTACTTGGAACTAGATTGTAAGCCCTGTAATGGCAAGGACTGTGTTCACTTTTGTTTATCTCTAAATCCTCACATGTTTAAACAATAGACAATAATGCCAGCTCTAACAGGTCTTAATAAACAGTCCTGGAATAAATGTGCCTGATGCTTTTATATTGACATATTTAATCTTTACACAAAGAGACTCAGG TCONS_00043339 . 5' 608 TCONS_00043339 . 5' 608 EMBV3_43497 TTGTGTTGGGGGGACCTCAGGGCTACGATGAGCGAATGGTTGTGGGAGTCATTCCTGATG Gene BVT0102_275740 - 1 EMBV3_06968 GK000007.2:12401645-12402302 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38703 GAGGAGCCTCTGGAGCAGAAGAGACAGAGTTTAGGTGAAGACCGTGTGATTCTGGAAGAG Gene GeneID:783330|RC3H2:XM_002691574:78_cdna Constitutive 0 NULL GeneID:783330 11 GENE RC3H2 NULL ring finger and CCCH-type zinc finger domains 2 EMBV3_17031 TAGGCCATGGTCAAGGATGAGCTTAGGATCACAGTGGACATAGAAGGGCGGGTGTATCCA Gene GeneID:512740|PRKDC:XM_002692634:102_cdna Constitutive 0 NULL GeneID:512740 14 GENE PRKDC NULL protein kinase, DNA-activated, catalytic polypeptide EMBV3_12767 GTCTGGTTTTATAAGATCCAAGAGTTAACAGGCTACTGATGATAGTCAGGTGTATGGATC Gene GeneID:534254|FAM54A:NM_001017948:32_cdna Constitutive 2 NULL GeneID:534254 9 GENE FAM54A NULL DUF729 domain containing 1 EMBV3_22696 GAAATAATTCAAGAGTGAATGTGGGCAGCAGGCGTGCATTGGGTCAAGTGGTGTGCAGTG Gene GeneID:534505|CPXM2:XM_002698575:142_cdna Constitutive 0 NULL GeneID:534505 26 GENE CPXM2 NULL carboxypeptidase X (M14 family), member 2 EMBV3_28509 TTTCACGCGGGGTTCCGTGACCGACTCCATAAAATCTGGGACTCTTGCGCAATCGAGAGT Gene BVT0102_215209 + 0 NULL GK000015.2:42801252-42911042 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059135 TCONS_00061337 TCONS_00061338 TCONS_00059136 2 XLOC_036270 XLOC_036956 Coding TCONS_00061337 XLOC_036956 Coding Coding ADM 15:42910398-42960531 j TSS45668 2864 1 TCONS_00061337_3 188 5 0.942970557727599 0.000976072004678429 0.000919933283233126 0.00278163327762101 0.000495500002919779 0.00093838133668369 0.000176069930803934 0.000874586214415696 0.000637086811479309 0.00053161096470756 7.68018752027895e-05 1.60248366309768e-10 1.8512885281998e-05 8.39374044566351e-05 0.00027348805505683 4.03137038358483e-05 9.49996191670431e-11 7.27776302277008e-05 3.55320326196308e-05 0.000473303467735458 0.00166833127017552 0.000295068064232618 4.00075534315804e-05 3.05562341685027e-11 1.25971826542661e-05 0.000636879810135707 0.00186612281398393 0.00215002075515489 4.52921978040938e-05 1.88964676710956e-11 2.5151297705093e-11 XM_005215893.1 ADM PREDICTED: Bos taurus adrenomedullin (ADM), transcript variant X1, 0.0 2598 99.93 0.503840782122905 NM_001124.1 ADM Homo sapiens adrenomedullin (ADM), mRNA. 0.0 1231 79.83 0.49231843575419 TCONS_00061337_3 sp|O62827|ADML_BOVIN ADML_BOVIN ADM; 3e-135 381 100.00 0.99468085106383 1 coding 0 0 0 0 -0.0157543285140234 0.89364531423754 0.0115745987624984 0.868122128569055 CCTACGCCCGCTGGCTTAGGCACTGGAGCTCCGTGGAATCTCCACTTCTGGGTCGGGTTTGCTTGTTGAAGCCCCTAGTAGCTCAAAACTAAGTCTGCACCAAGAGCAGGCTTCGCGGTCCTTCAGCGGGAGTGAGAGCTCAGCGCCCTCCACCCTCTTTCCTTCCCCCATCCCCTCCACCCTCCCTTTCTCCTGGAATCAGGGCTCTCCTAAAGGACACAGCGGGGAGGCCACGAGGTGCAGCTGAAGAGTCCTCTGCAGACCAAACCCCCCAGGGCTGGAGGGAACTGGAAGGAACGAGTCCAGACCACGGGACCTTCCCTGGCTGTGGGCCGGCGCCCAGCTGTCCTTGACCTCCCCAGCAGTCGGAGGCGCGCGCCGGGGAAATGAAAGTAAAAACCTGTCTTGGCACGGACCCAGCTGGAAGCTGGCGACGAGTAGGTCGCATCCGAAGACAAGAGTGACAGACAGCGGGTCCTACACAGGGTCGCTGCGAAAAGTCAGACTCGCAGCGGACAAACTGAAAGAAAGCGATGAGAAACGGGAGACGAGCGAGAAAAACAGAATAGTTGGGACTGGGGCGGCTCCTGGAAACAGAGCAGGCGTTCAGTAATAACCTGCAGTCTGCGGTGCGGGCCGACCGGCCGCCAAACCTCATCTACTGCGGCGACTGCCCAGAGGCCAGACATGCGGCCCGAACCTTCCGACCCTCAGCGTGTCCAGCCCAAGTCCGAGCCCAAGCCAGGAATCTGTCCCCTACCCGGAGCTGGAACTCAGGTCCACTCAGCTTCGACGTCGGGGTTTTGCCACTGCCAGAACGCCGTCTCAGACTTAATACTCCAAAGAATTTTGGCAGATCACCCCCTCAGCAGGGTCTGCGCATCGCCGCCGGGATGAAGCTGGTTCCCGTCGCCCTCCTGTACCTGGGGTCGCTCGCCTTCCTAGGCGTGGACACGGCACGGCTCGACGTGGCGGCAGAGTTCCGAAAGAAATGGAATAAGTGGGCTCTAAGTCGTGGAAAAAGAGAACTTCGCGAGTCCAGTAGCTACCCCACCGGGCTCGCCGACGTGAAGGCCGGGCCTGTCCAGACTCTTATTCGGCCCCAGGATGTAAAGGGCGCCTCTCGAAGCCCTCAGGCCAGCAGTCCTGACGCAGCCCGCATCCGAGTCAAGCGCTACCGCCAGAGTTTGAACAACTTCCAGGGCCTGCGGAGCTTCGGTTGTCGCTTCGGGACATGCACGGTGCAGAAGTTGGCGCATCAGATCTACCATTTCACGGACAAGGACAAGGACGGATCCGCCCCCAGGAGCAAGATCAGCCCCCAGGGCTACGGCCGTCGGCGCCGACGTTCACTGCCTGAGGCCGGCTTGGGTCGGACTCTATTACAGCCTCCAGAGCCAAAGCTGCGAGGGGCCCCGGACTCCCGGGTGCATCAAGTACTTGCCACCCTCAGGATTTAGGCGCCTGGGCAGCAGCGAACAGTCGCGCACGCATCTCGCCGGCACCTCTTCGGGCGGGAGGGCTTCCGCGAGCCGAGCCCCTCACTCAGCCTATGGGCCCGGGCTGAGAACAGCCCTGAGAGACCGAGAGTCCAGGAGGCACCGTCCGGCAGCCAGCGAGCACTGGCTTTGCAGGAACCCGTCCTCCTCGGAGGGGAGGCAGTGTTCTCTTCACTCTAATTGGGGCCAGGTGCAGTTTCTCCTCTCCGTGAGCCTGGCAGACGCTCACGGAGAGGAGAAACTGCGAAATAAATGCTGAGACCCTCAGGGGCAAGGGTCTGAGCCACTGCCGTGCCCGCCCACAAACTGATTCCTGATGGGGGTGTCACCCCACCGGGGTGCAAGCCTCACTATTACTTGAACTTTCCGAAACCTAGAGAGGAAAAGTGCAATGAGTGTTGTATATACAGAGATAATTATCAATATTTAAATTTGTTGTTGTCAAGATTTTTTTTGTAACTTCAAATATAGAGATATTTTTGTACGTTATATATTGTATTAAGGGCATTTTAAAGCAATTGTATTGTTCCCCTCCCCTCTATTTTAATAAGTGAATGTCTCAGCGAGATGCAACGTTGTTTGCTGCGTGGAATGTGAGAGTGTGTGCGTGAAAGAGATGAGTTGCCTCTTGTGGAAGAAGAAAACACCGTGTCTGTATAATCTATTTACATAAAGTGGGTGATTTAAGAAGTAGCAAATCAATAAACTGTCTCAATGCTGATTCATTCTTGGGTCACGAGTCTTGGGAGGGAGAGTGTCCCGGGTCTCGGTCTGCCCGGGAGCCTTGGGGTCTGGCCGCCTGGCGTAGGAAGGTTAGGACTGCTGCGCTGGCTGGTGCTGGCGGCTCTTCGCGCTGGCTAAGCTGCCGGAGTAACCCTCTACGGTGGGACGCGCAGAGCGCGTCTTGCTTGCCGGTTGGGGCTTCACGGAGATGTTCCAGGTCCCATCCTCGTGGGGCAGGGGGGCCGGGTAGAGTAGAGTGAGCCCTTAGTGGGGAGGTGAACTTGGACTCTCGATTGCGCAAGAGTCCCAGATTTTATGGAGTCGGTCACGGAACCCCGCGTGAAAGCGCCCCTCGGAGAGTTGGGGTGGTCTCCGAGGCTTTCCAGCTGAGGAGTTTCCCCCTGTCACAGCGGTGCTAAAGTGGTGCTTTTTTGACTCCAGCAAAAAGTGCGAGCTCCTCCGGGAAGTGCTCAGCCGGGCCAGTTAACCCCAGTTCTCTCCCGGCCCGGTGCCCCAGCGAGTCGGCGGGCTCATAAGCGATGCTTCGGCGCCCCCAGCCGGCCGCCTCCGACGTGCCAGAGAGCCATCAGGAGGTACGTGCGGTTTAATAAGTCCTCCTACGTGGGAGTCAGCACACAGCCT EMBV3_14023 GCAGATGGCTCAGGCGAGGATCAGCGCTAAGGTCAGCAAGTTTCTGGATGACCTGGGAAA Variant GeneID:506107|BAG2:NM_001034264:86_cdna 194^526 3 EMBV3_07233 GeneID:506107 23 GENE BAG2 MGC128966 BCL2-associated athanogene 2 EMBV3_39521 AGGGGTCTTCATCGTAATCAGATGCTCCACTGTCCTCCCTGTTGTTCTTGTTCGTATCCC Gene GeneID:100337362|LOC100337362:XM_002693335:226_cdna Constitutive 0 NULL GeneID:100337362 15 GENE LOC100337362 NULL olfactory receptor 78-like EMBV3_22002 GATAGGTGGGAGATAGATAGATGTATGAAATAGAATGAAAATGTACAAAGGTGGATCAAT Gene BVT0102_313604 + 1 EMBV3_05093 GK000015.2:34139762-34207051 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018481 TCONS_00018482 TCONS_00018480 TCONS_00018479 1 XLOC_009264 Coding TCONS_00018482 XLOC_009264 Coding Coding GTF2A1 10:93614166-93647863 = TSS12427 5142 1 TCONS_00018482_5 337 8 0.847637701804368 0.00206711044725576 0.00196409823865097 0.00159080220799693 0.00178055976164952 0.00210019812573715 0.000905449425782621 0.0026511548503162 0.00268041748252107 0.00411097866260346 0.000862274761551413 0.000437138509521969 0.000280738975830472 0.000534704249941741 0.00114853413976698 0.00113857208607827 0.00221668078628631 0.00089208392688942 0.0016936415383336 0.00189838773347868 0.00251852880796734 0.00120883314905386 0.00131258371393465 0.00156870039971961 0.00125265535200889 0.00300152845116811 0.00190170156971766 0.00184742705364213 0.000383828935555937 9.37964166763604e-05 0.000234397806796925 XM_005212232.1 GTF2A1 PREDICTED: Bos taurus general transcription factor IIA, 1, 19/37kDa (GTF2A1), transcript variant X1, mRNA. 0.0 9274 100.00 0.999805523142746 NM_201595.2 GTF2A1 Homo sapiens general transcription factor IIA, 1, 19/37kDa (GTF2A1), transcript variant 2, mRNA. 0.0 5790 85.16 0.99902761571373 TCONS_00018482_5 sp|P52655|TF2AA_HUMAN TF2AA_HUMAN Transcription initiation factor IIA subunit 1; 0.0 667 99.11 0.997032640949555 1 coding 0 0 0 0 0.18532412056065 0.40235974883031 -0.045496957325361 0.625134090249204 ATGGAACTAAAAACTTTATGGGAGAATAAACTAATGCAGTCTAGAGCGGTAGATGGATTTCATTCAGAAGAGCAGCAGCTTTTATTGCAAGTTCAACAGCAACATCAACCCCAGCAGCAGCAGCATCATCACCATCACCACCATCAGCAAGCTCAGCCTCAGCAGACAGTGCCTCAGCAAGCGCAGGCCCAGCAGGTCCTTATTCCTGCTTCACAGCAAGCTGCAGCACCACAAGTTATTGTTCCTGATTCTAAGCTGATACAACATATGAATGCATCAAACATGAGTGCTGCTGCTACAGCTGCAACCTTGGCACTCCCTGCTGGTGTGACTCCTGTTCAACAGATATTAACAAATTCAGGCCAGCTTCTGCAAGTGGTCAGAGCAGCCAATGGTGCCCAGTATATCTTTCAGCCTCAGCAGTCAGTGGTTCTGCAGCAACAGGTTATACCACAAATGCAGCCTGGTGGAGTACAAGCTCCTGTTATACAGCAGGTCTTGGCCCCTCTTCCTGGAGGGATTTCACCACAAACAGGTGTCATCATCCAGCCCCAGCAAATCTTATTTACAGGAAACAAGACTCAAGTCATACCTACAACAGTGGCAGCACCTACACCAGCACAAGCGCAGATAACTGCCACTGGCCAGCAGCAGCCACAGGCCCAGCCTGCTCAACAGCAGGCTCCGCTGGTGTTGCAAGTTGATGGAACTGGGGATACATCATCTGAAGAAGATGAAGATGAAGAAGAAGACTATGATGATGATGAGGAGGAAGACAAAGAGAAAGATGGAGCTGAAGATGGGCAAGTAGAAGAGGAACCCCTCAATAGTGAAGATGATGTGAGTGATGAGGAAGGACAGGAACTCTTTGATACAGAAAATGTTGTTGTGTGCCAGTATGATAAGATACACAGAAGTAAAAACAAATGGAAATTTCATCTCAAGGATGGCATTATGAATCTTAATGGAAGAGATTATATATTTTCCAAAGCCATTGGAGATGCAGAATGGTGAAAAGAGTTGGTTCATTTTCTTTTATAAATAAAACAAAAGAAACTTAAAAAAAAAATTTAAAGTGGACAGTTTGAAACTTGGGACATATACCAACCAAAACTTAACTTCTGCATGTCAGAAAAGTGCAGTAGAAGCAGAGCTACTGGAACAAAGAGACCTTGACAACACAGACACTACTTCTAACTGGCAAGCCATGGAACTGTAGCACCTGGGGTTGTTGGGGTGGGGAGGGTGGGGATTTGTGTAAGAAAACCAGAGTTGTCGATTTTAAATACAGGTACCTGCCACTGGTGATTAGCATGTAAAGCTTTGTTTATATTCCTTCCTCCAACTTGAGTTCAGCCAGAAGATACTTGTTGGAATGAACTGAAGAAACTTCCCTTTTGATAGATTGAACTGAAACTGCTTATTGTACGTGGTTATATTTGGTAAAAATTGCGTGTTGAGCTTTTTACAAAAGGGTAAGAATTATGGTGTTGAATTTTAATTCACTTGTATAAGGAAACAGTTTAGAACTCTTATAGGTCTTAAATATTTTTACTTGCTGTTCTCCCTCAGTAATATATACCTCTTCCTTCCCTGCTTGATGAAACATCTATTTACAAGTTAAAGGAAGTGTATAATCAGTAATTACATTTTGGAGACAAAATTTACCTAGGCGTGGATGTTTATTTTAATTAGGTTTTCAGACTCATTATAAAGACTTGGGTCTTGTCTGAGTTGAGCAGAATTAAAATGACAACTTCAGTTTCCTAACAGAATTGTATTTGTTTCTTTTAGTCCCACACCTTAAAAAGAAACCCCAAGTGGCTCCTCAGGAATGCAGTTTTGTTGCACACAGGTACCATCTAGCTGGAATTATATACATATGAATAGATAATTTTCCTGTTGGGCTGAAGTGTATGCTTATATATATGTTTAGTCTTTAAGCTAAACAAACATTTAGATAACATTCTGTGCATTGATTGATGCATTGGGCAGGTGGTGAGGACCTGGATTTTTATCAAACAGTTTAGTAATTTTAAAAGTTTCTTGTGTTTACTAGTAAAGAATTTTAAAACTCTTATTCTAATTGAACACATTTTTTAAAATGCAACTTTGTAATTTGAGGAAGAAATTTTTGGGGTTAGAGGAGGGTGGGCCACTAAGTACATACTTACCTCTCTTGCACTGGCCCTTCCAGGCCGCTGATAATACAGACATGGGCTCCAGTTTGCACATCGGGAAGACAGCATAGAAATTTGACTTGTATATTAAAAACAGTAGAAATGTAATATGTATATGAAGAATGCATAGCTTTGTATTCTGTAAGGGGCTCTAAAGAACGATGTGGCAGTGCTCTATGTTCAGTGTGAACGAGTTGCTTGGGAGAATTGCAGGAACACGTGTCCTCACCTTTGTTCTTAACACCTAATTCTTTTCATGGTTTATTTTGACAAAATTCACATGTGTTTAACTTGTATATTGATTTTTTTTTAAGTCTTCCACTTTTGTCTTCCTTTTATTTGCCTTTGTGTTTCCAGAAGTAACAGAGAAACACTTTAAAGTACGTTGCAGAGAAAAACTGTGAGCTGTTTTATATTGTTTTTTTTTGTTTTTTTTGTTTTTTTTAGCACAAATCTTTAAACTTCTTGAAAAGGCTAATTTTTTTTTTTTTCTTTTGCCTACTTCCCTCCCAAAATACCACCTTGGTCCCTTTAACTTATGTTCTGAACTTTGATATAAATGGTGGTTTCTAGCATGCTAGTAGTTAGATTTATTTCGATGCCATATCTGGTGATACGGTTTTAATTTTTACTATATTAGTTTTTTGGAGGTTTATTTGTTTACCCCACTATGCTCAAAGCACACGCAGGTTTTTTGCTTTGTTTTTTTTGAGCCTGGGAGGAGAGAGGAAGGGAGTAAAATCACAGAAGTCCTGTTGTTCGTTTGTCCTTCAGTATAGTTGCTAGTAGGTTTATATTTACCTGGTGAAGAAGTCAGTGACCTGAACTACCTATAAAAGTTTAGCATTGCTGCAGTGTTGATTGAAACCCTTTGGCTATCTAGTAGTTCTTACGCTACTGAACCTTGGATTACTATATGATACTCAGCTTATATTTTGGACTCTATGTAGACAAAAACATTGTATTCATAATAGAATTGTATACTAGCCTGTTTTTATAACATTGAAATATGAACAACCACTGCTTTCAGTGTGACTTAGTAGGGTTGTTTTGAAGCAGGAAATAACCATTTATATTTGCACCTGTGTATATTGCATATCAATTATAACATACTTGGTAAGCGCTTTTCTTTTACCTGTGAAAATTCTGAAAACTGGTCCAAACAACACTGCATACCAAATTGTGCTCTTATATATCACTGCATTGTGTTCCTTTACAGTCAAATAGCATGTTTTAGTTTTATTATAGTGGCTTGCTGTAAGAATGCCACTTGCTTATCTTTTATTGTACTTGAATTGTTAATCATGCTTTTAACATTTTATTTAACATCATTTCATTAGGTTCCATTAAAAATGTCATTCCTTTGAAAATGCAAGGATTCCCACTTTCAAAATTTTGAAGTAAAGATAACGTTTATTCAAAGAAGGAAAATAGTTCAGACTTGGTATTATGAAATAAGTGAAGGTTTCAGAAAAGGATTTGTTTAGATTTGCACAGATGATGATGGCACCTTTTATTAAAAAACAATCAACAGTGCTAAGGAAAATTTACACAAAAGTACTAGGTTTAAGTGTGAAAATGTGTGCCTTTCAGTGTATGTACTCTTTTTTTTTTTTTTTGGTGGTCATTTGGATAATCAGACCATTTGAATGGCTGAGAGCACATTTAAATTCTGTGGAGTGCCACATTTGGCTAAAACAACTCTAATGTGCAATTAGTTTCTGGACTAAAATGTCTGTTATATGAGGGGGATCTTTATATTGGGCTTTTATATTTTTTTAAATGTTCACATTTCTTTCTATTAAATGCCATCATAGCACCACATTTATATTGTTGCCTCTTAAAATCAAAGCCACCTTGATGATGTTCTTTTTGGCATGCATCAAGATTTGAGCAGTGTGTATAGCGATTAAAATGTGTTCTTGAAGAGCATAGTCTAATAGACTCTGGTTTAGACTGCAAGAACATAAAAATAAAAGTATAATAGCTTTTGTATAAAGATTTTCTTTTGCTATATGAAAATCAAGGATTTGGTTTGCTTTTTTTCTGGCTTTTATGGAGGAATGAAAAGTGTTATCTCCTTCTAAGAGTAATTTTTGATTATCTTATAGCAATAATGTCACCATTCTTTTCAGAAATAAATAAACCTTGTATAAGAAATCAGACATAATTTTCTTGGGAGCTCCCTTTATATCTTAGCTTTTTCTTCCTCTTAAGAAAATTCCTGTATTTTCAGATTATTTCATCTTGAACTTTTTGAGCTTTTGTGCAATGTAATATTTTATTGATCCACCTTTGTACATTTTCATTTTATTTCATACATCTATCTATCTCCCACCTATCCGTCTGAATCGGCTGTTTCAGGTTTTTAATTCATTGGTTAAAAAATAGTTGCTTTATATATTTCCTCATGGGTTTATGTTAAATAGTTTTGCATTTTAATCTATTATGCTATGGAAATTATTCTGAAGTTTGTATTCCCTTTTTAAGTCTGCCTTAGTCTATTTTTTGTCATTTTTTATGGTTTAAGGAAGAACACACAGAACTTGAAATTTTTATTTTGAGGAACAAGAAAAATTGTTTTTTTCTTTTAGGAGAAGAACTACACTGAGTTATTAACTACTATTTCAAGTTAAGTTTCCTTAAATCATCCGGTATGCTTCAGGGCTACAATTTGGGGGGAGGAGCTAATTCTTTTTGCTGTTCTGAGCTACTATTGTCAACTGCTGTTGTACATACTGTTATGTGTAAGGGCGTAAATATATTTATTATGTTTGTAAAATTCATTCTGTACAATTGCAGATCAAGGTTGCTCTTCTGTGATATACGGGATATTATGTTTTAAAGACCATCTTGGAATACAATTAGAGAACTTAGTATTTTGATGTACTAAGACCTATTTTAAGTTTAATATTTTACCTTTGCAAAAACTTTAATTAAAGATGTTATTTAAAAAAAGTAA EMBV3_29874 GCACTACCCAGTCCTACCCTGGTGTCCAGCTTCTGGGTCTTAGTTGGGACCATCTTTAAT Gene BVT0102_031994 + 1 EMBV3_25206 GK000019.2:43365354-43366277 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097099 TCONS_00097100 TCONS_00097098 TCONS_00097097 1 XLOC_058170 Coding TCONS_00097098 XLOC_058170 Coding Coding PLEKHH3 19:43365353-43374706 j TSS72033 2688 1 TCONS_00097098_1 506 8 0.713430282292558 0.00184875324901065 0.0011507169696608 0.000603226111980975 0.00133459398789894 0.00120783036626151 0.000144428810031619 0.000287342404053077 0.000629318375372996 0.0012063882440395 8.11257404755609e-05 1.36257279633235e-05 1.39849322745e-05 0.000113646554051499 2.05022218330808e-05 0.000118155941943939 9.93188388957677e-10 9.03330950788745e-08 0.000147735229940323 0.000985735485655708 0.00186235163179194 0.000898841618485344 7.07931043286017e-08 4.8937818754363e-08 0.000570929358309791 0.0012475366232468 0.00146254882042365 0.000651743102993486 5.36793675176303e-08 5.56600347908252e-05 3.31482336926901e-08 NM_001192826.1 PLEKHH3 Bos taurus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (PLEKHH3), mRNA. 0.0 2731 99.93 0.563988095238095 NM_024927.4 PLEKHH3 Homo sapiens pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (PLEKHH3), transcript variant 1, mRNA. 0.0 2224 92.39 0.563616071428571 TCONS_00097098_1 sp|Q7Z736|PKHH3_HUMAN PKHH3_HUMAN Pleckstrin homology domain-containing family H member 3; 0.0 665 94.27 0.857707509881423 1 coding 1 0 1 1 -0.103582118871431 0.376497624567573 -0.00349800014411306 0.9654696041862 TGCCCGCACCCCCATCCCGCGGCTGCTCGCCCGGATGCCTCTCCCCGGGGGATTGTGGTGGCTCCTCTGCTGCCGTCGAGGCTTTACTCTTCTGCATCGGGACTACGGGGACGGCGAGCTTAGCGGGGACGGGGACGAAGACGAGGACGAGGAGACCTTTGAGCTACGGACCCCGAGTCCAGCGGGCGGCGGGAGGGGCCCCCTAGATGTGACGTTGACTCAGCCTATGAGGAGTGGGCCAGTCTCAGACAGGACTGAGCAGGCGCTCCCGGACTCGGAACTGGCGGAATATGCGCGCTTCATACGGAGAGCGCTGGGCCGGACGCGCGGCCGGGAGCTAGTGCCATCGCTGGCCGAGATTTCCGCGCTGAGCCGACGGCAGGAGTTGTTGTGCACCGTGCACTGTCCGGGGGCTGGTGCCTGCCCTGTGGCCATAGACTCCCACACCACGGCGGGAGAGGTGGCTCGAGAGCTGGTGGGGCGGCTGGGCTTGACCCGGAGCCGTAATACATTCGCGCTGTACGAGCAACGAGGGGCGCAGGAACGAGCCCTGGCCGGGGGGACTCTCGTGGCCGACGTGCTCACCAGGTTTGAGAACTTGGCGGCGGAGGAAGCCGGGCTGGAGGACCCGCCGGACACCGGTTGGAGACTATGTCTGCGTCTTCACGGACCTCTGCACCCTGAGGGGCTGTCCCCAGACGGTCACGAACTGCCCTTCCTCTTTGAGCAGGCTCACGCTCTGCTGCTGCGCGGCCGGCCGCCCCCGCCCGACGACACGCTGCGCGCCCTGGCGGCGCTGCGCCTGCAGAGCCTGCACCGGGACTTCCCCCCGCGGGCGCCCCTGCCGCGCCTGGACCGCTTGCTGCCCACCCCGGCCCGGCCGCGTGAAGACCCTCCCCGCCCGGTGCCCAGGCCTCCCCCCTCCGCCGCCCTGCTGGCCGGGGCGATCTGGAGCCCGAGCCTGGCCAAGAGGCGGGCGGAGCGGGCCCGGCACGGCGGGGCCGGCCGCACGGCTGGAAGCGTGGCCCGCGAGGGAGGTGGCGGCGCCGGCAGGGCGGCTGCTGTGCTGGGAGGCTGGAAGCGGCTACGGGGCATGGGCCGAGCTGAGGCCATGGCTGCCTACCTGGCTCTGGCGGCGCAGTGTCCAGGGTTCGGCGCTGCTCGGTATGACGTTCTGGAGCTGAGCACGGAGCCTGGTGGGGGCGCTCCACAGAAGCTATGCCTGGGCCTGGGAGCCAAGGCCATGTCCCTCTCGCGGCCGGGTGAGACAGAGCCCATCCACAGTGTCAGCTATGGCCGTGTGGCCGCCTGCCAGCTAATGGGTCCCCACACCCTGGCCTTGAGGGTGGGAGAGAGCCAGCTCCTCCTGCAGAGTCCCCAGGTGGAAGAGATCGTGCAGCTGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGAGGCCCAGCAGCAGCCCTCCTCCATGCCAAGACCTGCCAGACACCTCCCCTCCCAGCCAGCACCCGGGTCTGGACGAGCCCCAGGGACAGTCGGGCTGTTTGGGGCAGCTGCAGGACTGAGCTTGCCAAGAGGTCACGACCTCCCTCTTGCCTCCAGCCTGGATCTGGACTACTCTGAGATTTCAGGGAACCATGGACCCTTTTGGCCCTGCAGGGACAGGGCATACCCCACACGCAAGGGCTGCAATGGGTGCAGACAATTTTCTAGTTTGTTTCTTAATTTATTTGTAGAAGAGAAGCAAAAAAAAAAAATCCTTATTTACACAAACCCTTCCTGTAGGAGTGTTGTCAGTGGGACAAGTTGGAGCCCCAGAGCTCAGAGCTCCACCCCCAGGGACGCCCACACTCCCAGGCTTTTACCAGCACTGAGAGGAGTCTGAACACCGCAGGGCTCCACCCTCCTTGACCTTCTAGATTTAACCTCCTCATGGCCAGTATGCTGCCCTAGGGTAGTGGGTGGGGCAGGCAAGAGGGCAGTTTTGGAAGCTGGCAATTACTCATCCTTCTTCCATTGAGTGGCATGGGGGTGGCCTCTTGGCGTCCCTGAGGCCCAAGGACAGTGAGTCACCAGGACTGGCACTACCCAGTCCTACCCTGGTGTCCAGCTTCTGGGTCTTAGTTGGGACCATCTTTAATGTGCCTACTGCTTTGGGCCTGGAACAGAAGAAGCCTGGAGCAGGATCAGACCCAAGAACTTCTCTGGCACAGACAATGCATTGATCGGGATGGGCTCAGCTTTACTCCTGAGCTCTGTTACTGCTTTATCAGATCAAGCTGAATTGGGTTAACTCCTGAGGATCTAAATGCCTTGGGCCTGGGAATCCAGAGTCTTGGCTTTCTTGACTTGCTCAGAATGCTGCAAGCCTTCTTTTAGCAGCCTCCACAGCCTCTGCCCTGAGTGGAGGAGGCTGGGGCAATATGGGCAATGTAGATCCACCCTCGGGCAGGACCTTAGGCACAGAGGAGACAGCAGACATCAGTAACGCTGGCTCCAGTCACACAGCCTGGTTCTAGGCAGGGATGCTCATGGAAACAATGGACACACGGACTGGGACTACCTGGTAAGACTAGAGCAGGTAAAGCCTACCCTACCAACACATGCCTGGGAACTGTGAGGCACCACGGAGATCCTTTCATTGTCCCCTGTATTCGCCTACCAAGGCCTGACAGCTATTCACAGACCAAGGCCTGAC EMBV3_21716 CCTGCATTGCCATATTGGGTGCTGCTATAGGGCCAAAGTCCTGGAAGTAGAGAAAATGGG Gene GeneID:527528|IFIT2:XM_002698356:117_cdna Constitutive 0 NULL GeneID:527528 26 GENE IFIT2 NULL interferon-induced protein with tetratricopeptide repeats 2 EMBV3_11818 CTGGTGAAGATGCGGGGATTCTTCCAACAAAGAAATCTATCCAGGCTCAGTGCTCTAGGG Gene GeneID:338074|AOX1:NM_176668:67_cdna Constitutive 1 NULL GeneID:338074 2 GENE AOX1 MGC128959 aldehyde oxidase 1 EMBV3_06161 AACAAGGAGCTCAAGGTCAAGCTGCAGGAGATGGAGGGCACCGTCAAGTCCAAGTTCAAG Gene GeneID:404108|MYH9:XM_002687685:52_cdna Constitutive 0 NULL GeneID:404108 5 GENE MYH9 NULL myosin, heavy chain 9, non-muscle EMBV3_22811 GCTGCAGATCGCCCTCATTGCCCTTTTCTCTGAGATGCTCTATCGCTTCCCCAACATGGT Gene GeneID:100137723|GTF2H4:NM_001101057:8_cdna Constitutive 0 NULL GeneID:100137723 23 GENE GTF2H4 MGC166318 general transcription factor IIH, polypeptide 4, 52kDa EMBV3_42276 GTTCACACTCCTCTGGACACTCACTCGTTTCTGAGTGGAAGTGTCTTGAAAGGTGCTTCA Gene GeneID:513654|GPSM2:XM_002686157:294_cdna Constitutive 0 NULL GeneID:513654 3 GENE GPSM2 NULL G-protein signaling modulator 2 (AGS3-like, C. elegans) EMBV3_22286 TTGCCAAATAAGACGGGATAGTTTGTGGAGTGTTTTGCGGAGCGTCAGGACTCAGAGCCA Gene GeneID:504458|MLLT1:XM_002688914:213_cdna Constitutive 1 NULL GeneID:504458 7 GENE MLLT1 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 EMBV3_20968 GCCCAATAAGCTGGATGAATCTGCCACTCAGGCTCCAGACAGCTGCAAATCATTGCTTAC Gene BVT0102_173716 - 0 NULL GK000017.2:71253677-71304830 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078124 TCONS_00078125 TCONS_00078122 TCONS_00078121 TCONS_00078123 TCONS_00078126 1 XLOC_047225 NonCoding TCONS_00078126 XLOC_047225 NonCoding NonCoding - 17:71261517-71283421 - TSS58204 1762 1 TCONS_00078126_2 149 0.162883087400681 3 0.919691366479478 0 0 0 0 7.88261710741955e-36 0 1.57021514320542e-45 0.000208122584741774 0 0.000320546804248343 0.000325199063477728 4.9047978567341e-06 6.67563569990367e-05 9.64612917178932e-05 4.7057927835614e-05 0.000770620577457025 0.00125059811628758 0.000156262856704071 0 1.6325606535233e-05 0 0.000107559820508547 3.01853666030565e-05 0.000158282926533354 0 0 0 0.000141939566980996 3.3050739450184e-05 2.93107557824545e-05 0 noncoding GGCGGTGGTTCGCAGCCCGGGAGCCGAGCCCTCAGCCCGCGGGCGCGGCGTTGTTTCTGCGGCGTTTCTCGCTTTTCTGAGGGCTCGCTCCGGCTTAAGGGACCCGCGCCGAGCTCGAGGCGCCGCACACGGACCTCGACGGGGCTCTCGGCTCGGGGCCGCTCCGCGCGGTACACCTTCCGTCGAGGAGACGCCTGCCGGCAAGGGTGAGAGAGAGGCGGTGTTTACTAAAGTAAGCAATGATCTGCAGCTGTCTGGAGCCTGAGTGGCAGATTCATCCAGCTTATTGGGCACAGGGGTGGGTTACACCCCAAAGGCTGCTGCTGCGGGACGCCTGGACAACATGTGGACCTCCTCCACACCTGAGAGCCGAAGGGAGCTCAGTAAATGATCCAGCGGGTCAAGGCGGAGCCTGCAGCACGTCCTGCCCTTCTGCCTCAGCAGTGCTCGCTGAGTCCTGTCACTTCCCCTCCAGGTCCCTGCTGGGCCTGCACGTCTGCTTCTCTCTGGATCCACTGAGGCCACCACCACTTCTGGCCTTGTCTGTGACAGCAGCCGCCTCACTGCCTGGCTTTTGGATCACCAGACTGGAGTTTGAGTCTGCATTCTGCTGCAGGTTAGCTGAGCGACCTTGGATAGGGCTCTTCAGCTCGCTGAGCCTCAGCTGCTTCATCTGTAAAATGGGGTAACACCTGTCTTAAACAATGGTGGTCTGGACAAAAGGGGCTTAGCACATAGTACGTGCTCAACGAATTGGCTTGTCTCCCTCTTCATCCCTCAGACCCTGGTTTACACACTGCTTCCCTAGGGACCTCTCCTGACTCGCTGCAGTTTCCCACAGACCCCTAGACTGCTCCGCAGCGTTCTCTCACTTACCCGTCTTGTCAACAGTCTTCTCCGTGAATACAGGGTTCTGGCTTTCTCTGCCTCAGCTACTGAGGTGCCTGACATGAAGTAGGGGTTCGTTTTTTGCTATGTGACTGCTCTCCCTGTACATAATCAAAGGTTTCCAGGCGTGGGGAGGTCCCTGTAATGTTCCCCCACCAACTCCAGGTAAGTGGACAGATGACCACATTATATAAACAAACAGTGGAAACCAAGAGTAGCCCACCTGATTTACGTTAGACCTAGGGTGCTGGGGCAACTCATCATAGCAGACCCCGTTCATGGGCAGCAGACCTGGGTCAGGTAAGACCCACTCAGGGCCAGGCTGCTGCAGCCAGGAAGCCAGTGCTCCGGGCTGACACACACTCCCTCTAAACAGTCAGGCTGGGCAAGCCCACCCCTGGGGGAGTGACGGCGGCCCTCCGCTCACGGACCCAGGGCCACCCAAGCGGTTGAGCCAACGCTGCTTCTCAGGCCTTGACAGCTCCCCACTGAGGCTGACCGATCACGGGAGAGGTGTGCACGCCACGGGGTTGATGCCCTGAGAACCCCAAGGTGTGGAGGGACTGGGTGGTGGTTTTACCTTTGTAAAATAACATGACTAGAAAAGTACGTTAAAAATCTGCAGAGGATGATGAGTTATGAGATGAGCAGTCGTGAAACCCACCACTGTCCAGAAGGTCACATCCTCTCCAGCCTCTAGAGATGTCCAGGGCCCTGGCTTTTGTAGTTACCATGTCTTTGCACCTGAAATAACACTTTTGCCTGGTTTTGAACTTTTAAAGAATGGAATCATTCAGCAGATAATTTCCTTTTCTTCCATTTGGTGTTACATAGATTCATGCATGTGTTTGTGTATGTAACTAGCTCCTTCACT TCONS_00076213 r 5' 0 TCONS_00076213 r 5' 0 EMBV3_11309 TACTAGTCATCCAGTCAACAGGAGGTGGTGAGGAGTATCTCCCAGTTTCCCATACCTGTT Gene GeneID:533336|HERC4:NM_001076894:356_cdna Constitutive 0 NULL GeneID:533336 28 GENE HERC4 MGC142977 hect domain and RLD 4 EMBV3_01706 GTGAATTGATCTTGGGCAAAGTCCCACTGTGTAGGCATGTGAATTTTCATCTGTCCAGCC Gene GeneID:493637|LYSB:NM_001007805:19_cdna Constitutive 0 NULL GeneID:493637 5 GENE LYSB NULL intestinal lysozyme EMBV3_41088 TCTTCGTGGTCCCCTTCTTCTCCCCACCTTACTCCATTCTTAACTCTGCATTCTGGCTTC Gene GeneID:538775|KHDRBS1:NM_001046442:148_cdna Constitutive 0 NULL GeneID:538775 2 GENE KHDRBS1 MGC137309 KH domain containing, RNA binding, signal transduction associated 1 EMBV3_13354 GAGGACAAGCAGTCCCGGCTGCGCTACCAGGGATTCTGGCCAAACATCCATCCGCAGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39141 CCCTGGATCAGTTTGTGCTGCAGTCGCACGCTTGGTTCAACGTCTCCTCCTTTCCCTACT Gene GeneID:515011|ITGA2B:NM_001014929:242_cdna Constitutive 0 NULL GeneID:515011 19 GENE ITGA2B NULL integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41) EMBV3_28267 AAGCCTGTGGAGCAATTCATCTTACCCGAGACTGGGGAGGGTGCCTTGCCTCATGAATTC Variant GeneID:100125310|B3GALNT2:NM_001103343:58_cdna 861^971 2 EMBV3_10282 GeneID:100125310 28 GENE B3GALNT2 MGC166416 beta-1,3-N-acetylgalactosaminyltransferase 2 EMBV3_06799 CTGGAGCGGCTGCTGGCGTGGAAACTAGCGGCAGTGCGTCTGGGCTGTGGACCCCGCACC Variant GeneID:516108|LOC516108:XM_002697903:510_cdna 328^640 2 EMBV3_28420 GeneID:516108 25 GENE LOC516108 NULL similar to CG2446 CG2446-PC EMBV3_00142 AAATCCAGGGGCTTTACAAAGGCTAGGTACTCAGTGCTCTCAGGGTGCTCTTCTCCCTTG Gene BVT0102_037241 + 0 NULL GK000003.2:20394665-20400835 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172443 TCONS_00172448 TCONS_00172450 TCONS_00172445 TCONS_00172451 TCONS_00172449 TCONS_00172446 TCONS_00172444 TCONS_00172447 1 XLOC_104131 Coding TCONS_00172449 XLOC_104131 Coding Coding C3H1orf51 3:20398146-20404391 j TSS128438 3915 1 TCONS_00172449_1 297 0.176500638569604 6 0.373959000640615 0.000556145990287904 9.61166990253822e-05 0.000340178030716561 0.000122980347946895 0.000148111865320189 4.93403479537652e-05 7.86225714776727e-05 0.000198185863904575 0.000772427329315572 2.1739576479596e-10 1.08442948709958e-26 7.45813603848704e-08 0.000160403241450357 2.0705575460592e-05 0.000111128549373381 1.32949648988645e-36 0 8.46513058998262e-27 0.00017684503157331 0.000170501013387969 0.000463146369277534 9.92559903526023e-06 4.17035155303741e-62 4.95029348346635e-28 0.000715299624444171 0.000780642080599062 0.000181938476720583 6.47378705544286e-25 2.79938075052569e-10 3.10338894392491e-19 XM_005203940.1 C3H1orf54 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf54 (C3H1orf54), transcript variant X1, mRNA. 0.0 1981 100.00 0.280204342273308 XM_005244910.1 C1orf51 PREDICTED: Homo sapiens chromosome 1 open reading frame 51 (C1orf51), transcript variant X1, mRNA. 0.0 1274 85.65 0.280204342273308 TCONS_00172449_1 sp|Q8N365|CA051_HUMAN CA051_HUMAN Uncharacterized protein C1orf51; 5e-155 443 81.08 0.993265993265993 0 noncoding 0 0 0 0 -0.263738189284177 0.366460981502939 -0.0376309551067166 0.577703311675744 GTGCGGAGCTGCACGTGTCCTGGAGGGGGAAGGGGCGGGACCCAGTGGGAGGGAGCCGGAGGTGGGTAGCAGAGACTCGAGAGTCTGAGTAGGAGCTGCACACAGCCTGAACTGAACCAACTGACACAGGCAACGACCCAAGGTTTCCAGTAACCAACATGTAGCATCTCACTCGGAACAGCGGGGCTTGGCTTCTTCTATGTCAGGATCTGGGATCAAAAGATCAAGAGATGGTGAACTGGAGACCTGTATAAACATCCAGGGTTGTACCACAGAAGGAGACCTGCTCTTTGCTCAGAAGTGTAAAGAGCTCCAAGGATTCATACCCCCTCTCACAGACCTACTGAAGGGGCTGAAGATGGGTCGATTTGAGAGAGGATTGAGCACTTTCCAGCAGAGTGTGGCAATGGACAGGATCCAGCGTATCTTAGGAGTTTTGAAGAAGCCACAGATGGGAGAACGTTATCTAGGAACTCTGTTACAGGTGGAAGGAATGTTAAAGACTTGGTTTCCTCATATAGCTGCTCAGAAATCATCATTGGGTAGTAGCAGGAACCAGCTGACCAAGTATTTTCCAAGCCACCACAGTTATCCAGCTGCTTCCTCTCCTGCACCTTCCATGGAAAAGATGGACCAGACACAGCTAGGACAGCTAGTATTAAAACCAAAGCAGCCTTGGCACCTCACCGAATGGCCAGCTATGAACCTCACTTGGATCCACACTACTCCAATTTGCAATCCCCCTCTCAGTTCCCCAGGTACCATCTCCTTTAGCCATGGTCCTTTAGGCACTGGAACCAGCATTGGTGTCATCCTTTTCCTCCAGCATGGAGTACAGCCCTTGACTCACTCAGCCCCAATCACTCCAGTTCCATCTACGACAGCATCTCCTGTCATCCCTGGTAATCATCAGAAACTATCTGCAGAGGGGTCTCATTATTACAATTTTCCAGTAACTCTGCCATCAAACTGTAGCTGTGCCCTTTCCCCTCTTGGTCTACCTGCCTCGACCAGAGAGAGGACCACAGGACACCTGGAACAGATGAGAGGCCATCCTGCAGTTGCTCCTGCTGTCCATCCTCTCGACCCCTAATCCAGGACCTGAGACTGTAGTTTCTAATTTGTGTAAATATATGTCTCTCTCTCTTTTTTTTTACTTTTAATGTGTGCATTTGTGTTGAAGAAAGAGAAATCCTTTATGATTAAATACATTTTATACCTAAAGAGTTTACTCACTGGGGGAAATTGAAACCTTTTGCCTCAACCTTTTTTCCTCTGACCTGCAGAAAAGAAAGGGGAGGGAAATGTTTGTGAACCCAAGCTCCACCAAATTAGAGGTCTGGATGGGACAATATTATGTCCTGCGGGAGAGGAAAAGGGACTCTCTGCTGCTAAGTTCCTAGGAAACACCTTTGGGACAGTTAGGGGTTCAAAGCTGGGTCTGTTTTTTCATTCAGGCTCAGAGACTAGTACCTTTCCCTTTGTGTGTCTCATGCTTGTAACCTTCCAGCTGGTCCAGACTAGCAGGTTCTACCACTCAGGGGTAGCTCTTTGCTTCACTGGGAGCTGTTGATTCTTGTGGATAAATGCATAATGTAATGTACTGCTGTCAGGAAAGGGACACCAAAGCCAGAACAGCCACCGTGGTTGCTAGTTTTGAAGAGGAAGGGATGCCTTAGAACTGTCAGAATGGTGAGTCCTCTCAGATGCTGGGCCTAATCATTATTCAAAAGCTTCAGCTGCTAAATGTATGTTACCCAGTGTCATCAGACCACAAAAGTGAAGTCTGTGAATTTACTTACCTCTGCTCTTCTCCATGTATTGTTCTTTCTGATCTATCCCAGTTTCCATCACAACCATGTCCTCTCCCAGCCTTAGCGATGTATCAGGCTACCTTGTCATTTTACTTATATTGCATATTGGCTGCGTAGCATATTTCCCATAGCTAATTGTACATCTTTCACCTGTTTCTCAACTCTGTTCTCAGTAGATTATTGTCTCCTTTTATTTCAGACAACATGCTCTCTCTTCTAAGGCAAACTGCTCCAGTTGTGCTTTTGATTACCTTTCACCTCTGGAATTTCTGCTGAATCACTTGTCCCTTCTTTACTTTGCAACTTCCGATTGTTATTGATTTGTTTATGCTTTCTTCCCTCCTGCAAGTATGATCAGGTACCCTCTTCGTGAAAATATCTCTTGACTCTACTTGCCCTCTTTCCCGTCTTTTTTCTCTAATTCTTTTTATTTATGTATGTATTTATTTAGCTGCACCAGGTCTTATTTGTGGCACCTGGGATCTTCATTGCGTAGGCTTAGTTGCCCCGCAGCCTGTGGGATCTTTGTTCCCCAACCAGGGATCGAATCTGTGGCCCCTGCATTGAAAGGTGGATTCTTAGCCACTGGACCACCAGTGGCTAAGGGGAAGTCCCTTTTCTTTATTCTTTAATCCTTGACAGAGTAGTCTAATCATACTCTTTCTGACTCCTTCCTATCACATAATCCTTAAATCTTACAGCCTAGCCTCCACCGCACCCTCTTAGTCACTAATGATCTTACAGAATTTGAGTATCATAAAGTAGCTTCCACCCAATCAATAGCTAAATCCAGGGGCTTTACAAAGGCTAGGTACTCAGTGCTCTCAGAGTGCTCTTCTCCCTTGGATCCCATGTCAGCACACTATCCTAATTCTCCTCTTACCTATCTGGCAACAACTTCTATATCTCGTAATAGCCTCACTTCTGCCCACTCCAGAGTATGGGTGTTCCCTTAGGCTCAATCCTTGGCTCTTTAACTATGTTCTTTCACTTCAAGCTTTCATCTTCTTCATGGCTCTAATTATTACCTCAACTTAGAAGACTTCTGAAGCTTCCTCTCCAGTCTCAATCTTTCCCATGAGATGACATACTGAATGTATACATTTCTGCTGGACAGTTTCATTTACTCATTACTAATACTTAAAACTTATTAAACGTTTCAGCATTTTAGAGCCAAGAGGGTGACATGAGAGTGTGATTAGTCTATTCAGTTGTGTCCTAATCTTTTCGACCCTGTGGACTGTAGCCTGCCAGGCTCCTCTGCCCATGGGATTCTCCAAGAAAGAATACTGGAGTGAGTTCCCATTTCTTCCTCCAGAGGATCTTCCCAATCCAGGGACCAACCCGTGTCTGCTGTATTGGCAGGCAGATTCTTTACCTCTGAGCCATCAGAGAAGCCCCAAGAAGGTATTATTTGTAATTTTATAAATGAGGACACTTAGGTAGCTTGTGTAAGACAAAACAATGTGTCATACAGGACTCTTGTTTTCCAGTCTGATGCCTTTTCTAGTGTTGACCAATCAAATTAGTGTTCTTCCTGTTCTGCCTTTTTACAGCCTCTTTTTCTTCTGTTAATGCTGCCTATAGTACCATCTTTTTTCTAGATAACTAGGTTTAAAAGTTGGTGCTATTTAGTCACCAAATCCTTTTTATTCTATATTTGGAATGGCTCTTAAAATCTGTTTCTTCCTTTCCATTCCATCACCACCTCTTTGGTCTAAAACTTGGCTATAGCAATAGCTTCTCTTACCTCTAATCCCTTCTCACTTAAAAACAGATTAATTTTCCTGAAACAATGCTTTGCATGTCATTTCCTATTCAATGGCTCTCTGATATTTTGAGAAGAAAATCCAAAGCAAAGTCAAGGCCTCTGTTTCTCTCTCTGCTCCCATGCATGATCCGTCTGTTCTACGCTGTTTTGTTGTTGCTTGCTCCCAGAAACTGTAAGCCTTTTTGCCTCTAAACTCTTGTTCATGCCACTCACCTTGCCCAGCCTTTCTGCCCTCTGTTAACTAAGCCCTCCGCTTCTTTCAGTGACTAACTCAAGTCCTCTCAATTGTTTGCCCCATTAAACACGATCTATATGCTTAGGCTTTGGCCC EMBV3_35025 CGATTTCTACAGGAAGCGGAGAAAGAAGAAGGGTCCCTGGAGGACGAGGACGAGGACCCA Gene GeneID:618753|RNF187:NM_001164265:46_cdna Constitutive 1 NULL GeneID:618753 7 GENE RNF187 NULL ring finger protein 187 EMBV3_09819 CAGCTGAGCAGGGACGCGGAAATGCCTCCTTAAGTTGCTGCTTTACCACAAAAACACCAA Gene BVV0102_144232 + 0 NULL GK000030.2:47629301-47751562 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053517 TCONS_00053522 TCONS_00053525 TCONS_00053523 TCONS_00053521 TCONS_00053524 TCONS_00053520 TCONS_00053519 TCONS_00053518 1 XLOC_031760 Coding TCONS_00053518 XLOC_031760 Coding Coding - 14:56785517-56790680 - TSS39462 4731 1 TCONS_00053518_5 1003 0.0445994504333122 2 0.0838822161952731 0.0914840974492628 0.0469428809071581 0.0736813776688537 0.0484931916920006 0.0414185923435931 0.022228994367769 0.0236169511131658 0.0254390696994851 0.0447147399896641 0.00312338014296214 0.000971365894259545 0.000628615228480934 0.00804986701407206 0.0167751693399586 0.00936196012086035 7.30515329772528e-18 1.31559417457936e-15 0 0.0333354567673074 0.0519503891349438 0.0201230271993227 8.86592466718971e-12 1.68695943914114e-21 2.87028201920844e-17 0.0419984009011266 0.0268519618885277 0.0283922798586169 0.000183238761388659 0.000154470533544826 0.000522903301154022 NM_001083679.1 SMG5 Bos taurus smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) (SMG5), mRNA. 3e-98 365 68.50 0.216867469879518 NR_033609.2 A930017M01Rik Mus musculus RIKEN cDNA A930017M01 gene (A930017M01Rik), non-coding 0.0 1885 74.48 0.620798985415346 TCONS_00053518_5 sp|Q6ZPY2|SMG5_MOUSE SMG5_MOUSE Protein SMG5; 0.0 759 43.36 0.979062811565304 2 coding 1 1 1 0 0.161183840708522 0.354051654904003 -0.140672041884024 0.0405976015879593 GTGGAAGCAAGAATGATAGATGATTATAATGGATGTGCTACGAAGACACAAATCGGTGTTGTGGGAAGAGTCCAGCCCTATGGAGAGCAGCCAGGTAGAAGCCCTGAAGGCCAGACTCCTCTACCAGGATGTGTGCAGGGCAGCTCAGTGTCTCGACCATTTCCTTCTAAAAGGAAATGCCCACGAAGAGCTTTTCAAGCCTCATGTCCTGGCCCTCAGGGATATGGTCCAGCAAGTCTGCATTAAACTCATGTTTCTGCACCCAGTGGAATATGGGAGGAAAGCAGAAGAGCTGCTCTGGAGGAAAACGTACTCTGACGTGGTTCTGCTGCTGCTGAAGCCCAACAGAAAAAACACGGACTCCTCTGAGGAACAGTGGGAAGGCCCCCTGTGGGCGCATCTAAAGGGTGGCCTCAGGTTCTATGAACACCTTTTCCTGTTCCTGCAGGAGCACTACCAGCTGGGCTTGTGGAGCTATATCGACTGGCCTCACAGTGCCATCCACTTCATCGGCTGCAAAAGAGCAGGTCCTGCATCAGAGGAAGAGGTGGACTGGGCACGGATGGCCTGCCACCGCTGCCTGCTGTACTTGGGAGACTTGTTCCGCTTTCAGAATGAGTTCCTGGCCCTGCACACCAAGGACCTGGCAGAGAGGTGTTATTACAGAGCCCTGTCAGTGGCACCACACATGGGCATGCCCTTCAACCAGCTGGGAACTCTCACGGGGAGCAAGTACTATGGTGTGGAAGCCACATACTTCTACCAGCGCTGCCTCCACTCGGAAGTGCCTTTTAAAGGGGCATCTTGGAACCTCAAACAACTCTACCATCATGCGGGAAAAAGATATAGCCGGCTGAAGAGGAACCAGGGGAAGAAGCTCTCTCTCAGCCAGAGGCGGTGTTGGGATAACAAAAGGTTACTGGTTAGTTTCCTCTACCTTCAGAGCCTCTTGCAGCCTCAGAGGAAATTCAGAGCCACCAGGCTCATGGCCTTGTGCCAGCTGGTTCTGGAAGACTTCCGTCTTTGTCTTTCCTATCGGCCCTGCCCATCCAACCAGAGCCAGGCCTCCAGAGAGAGAAAGCCCGCAAGAGGCTACCAGTTCCTCCCCGACCTCCTCATCTTCCACATGGTGGTCCTCTGCCTCATGAGCGTGCACAGCCTGAGGACAGCAGGCTCCAAGCAGCACAGGACAGCGGTCACCTTCACCTTGACCCTTTTCTCCCATTTAATTCAACACGTGACGACACGCCTCCAGGCTGAGCTCCAGAAAGGGAAGCTGACTCCAGAGGTGGACGTCCCCAGGGACAAGGAAGACCAACAGAAGATGGAGGCTGGGGAGGGGCAACAAGATGGTCTAGCCCCCTCCCCTGGGCCCCGCCACAGCAAATCTCAGAAAACCCACAGGTCATCTCACGTTTCCAGTGAGGGTGACAACCCAGAAGCCAGTTTTCATTCTTGCTGTGACTGGGATGAGACAGAAGAAGATGAAAACACATCCTTATGCTCACAAGTCAGCTCAGAACTCAGCAGTGAAACCACTTATTCAGACACAACTGATGATGAGGAAAGTGGCTCCCTGAATCCACAAGCAACGCAGGAGGGTGGAGCTAAATCCAAAGATAGAATTTTCCCTCCCAGGGATAAGCTGAAGACGTGTCAACTTCCCAGTCATCTCCTAGGTCTCTTAAAAACAACCAGTTCCGCTAGCCTATCAGCCCCGTCGAGCCACAAGCTTCCAGGCAAACATGGCTTTCACTTGGCTCCTGTCTTCAGCCACAGTTTCTTTACGCCTCCTAGTCCTGCCTCCAGCAAAGCATCTGTCACAGAGGATGACGTGAGCAGCTGTCTTGAGACAGAGCCTCCTGCTGGCTGCAACTTGGGGCAGAATGCCTCCATCAGCCAACCCTGCAGCAATCTCCAGACCATTCAGAAGAAACTGCAGGTCCTCTCTGCAGAGGGGCTGCTGCCCACGGTCAAGGTGATACTGGGCTGGCTCCGCGCCAACTGCAGTCTCCTCACCGCACATGGGTGGAGCCTGTTTAGCCTGTGGGACCACCTGTCCATGCTGCTGAACCTGCTGCCCTCTGTGCGAGACCTTCAGGAGCCAGGCCTGGGCCTGTCCTACCATCTCCATGAGCTACTGCAGAGCTGCAAGGGCCCACACCTTCCCCAGTTCCTGAAGCTCCCAGAGGACATTGCCCTGGGCCAGCACTGGCTGAAGCAGGCTTCCCAGGAGAGGGTGGGCTTGGAGCAGGACCCACCTCCACTCAGCTCCCAAGATGAAGCTGCTGTACGCGTCTGTTTCCTCAGAAGCTTTGGCCACTTCGCCACGACACTCCCTGGACAGTTCCTGAGGTATGACTCTCATTCAGGGGTCTTTGTGAGCACTGGGTTTGAAGGACCAGACAACCTATCTCAGCAGTTGCTAGAGAAAACTTCCAGGATCAGATTTTTCAAAGACATAGTACAACTGTGGCTTCAAAGTGAGGTGGTGCTGCTGGAGAAAACTCTCAGGCACATCCAGATTCGGTCAGCTTTGACCCTTTACCTGTTCCCTGACCCCCGGGCCCTCTGTGAGCACCTGCCAGTCATCCGGCAGCTTGCCACCAGCGGTCAGTTTCTCCTCATCGTACCCAACATCGTGGTGGACATATTGTATATCCTGAGAAGGGAGGACAAGCGGGCTTCAGCAGCCATCACCTTCCTAGAGGGGGAGCTGAAGAGAGGGAACCAGTACCTTCTCTGCCAGTCCTGTGTGTCTGTGACGTTGGTGAGACCCAGGATGACCAGGCCAGACTCTGATGCCTGGGACCTCTATAACATGCTTGACATCTGCAGAGGTCTGCTGGACTCATCCTGGCTGGGGACCCCCGACCACAGGAATATGATCACCATCCTCACGGGCATCTGTTTAGACAACCCTAGGAATCTCTCATACCCCCTGCAGCTGGTGCTGGGGACGGCAACTGAAGCTGGTGTGGAAGTCAAGAATGTCCTGCGCTTCTACAGGAAGTGGAAGATGGTCAGCTGATGTGGTCATATCTCCCTACTTCTCCCTCGGCACTTACACATCAAGCTCAGTCTGTTCACCTCTCTTGTTCGCACCTAATGTTAAAGGTAGCTGTTGTGTAAACTCATATCTGTACCTACCTACCTATGGGTAGAGTCTCAGTGGACCATCTCCCAGAGGCCTTCATGTTTCCTTCTTTGTTGTCTTGACTTGATATCACATTCTCTGTCTGAAAAATATCTCTAGGTTAAACTAACTCAGTATTTGGTGTTTTTGTGGTAAAGCAGCAACTTAAGGAGGCATTTCTGCGTCCCTGCTCAGCTGGTGGAACTGTAATTTGTTTTGCTCTGTTTTTTTTTTTTTTTGCTTTGCTCTGCTTTGTGACATGAAACTTTTTAATGCTATTTTATTGTAATGGATCATGCCTACTATGTAAGGTAGGCTTGGCCATCTGTGAAAGCTCAATAAATGGAAAGTTAAAATTCTGATTGGAGTGAAGGGTTTTATTGCAATTCCTGGTTACTTCTTCACTATCTTTTATGCTCCATTCAGGTTTTTCCCTTTTGGCTAGGACTAGGTCAGTAGCCCAGAACGCTGTGGTAGGATTTCATTTGCTCCCTCTAATATGATAGCAATAGCCCCAAGGATCAGCTGATCTGGTTCCAGTTATCTTCCATTGGAAGATAACCTACTTCCCAGATTATCTGGGAGTAGGTACTATTTAGTGGTACAGTATTGGTAAAGTTTCTAATTTGGCTACTATGACATTGTCTCTTGCTTTTTCCCTGGCTCTCAGATTCTTTTGGGACCTCTTGTCAACATTGTACTGATGTATACTCTGGAGAGCAGCTCTTTTAGCAAACTCCATTAGCAGAGTTTGAATGTGGACCCTGTAAATACTGGCCACAAGTGAATATCTACCGATTTACTCAGATTGGCATGCATTACAAGTATTGACATTAATCTCCTCCCCTCCTCCCATCCCCAGAGTTCTTCCCTGGTAAACCATCACATTTCAAGGCCAAACTTAATCTTCTTTTAGGATCCTAAGTTCTTGAGGCATCTGAATCCTTCTCTGTCTGGATATGTTCCTCCCTAAGTCAACCTCAGGTCTAATTTATCCAGAAGCAGAAATTACCTTCTGAGCTTTTTCCTGACTCATGGGTTCTCATTTCTCAGTTGTCCTAAGCTAAGCCTTTGTGTTTCAGTTAAACTTCTGTCACTTTCCCTTTTCCATGCTTTTTAAAGTATTTTATTGTATTTATTAAAGAAATTTCAACTCATGGAAGAAAATCTTAAGAGAAAAACCCAAAGGTTGTTATACCCTAATATTAGCATTTTGTTTTCAGTTTATTTATAACTTGTCATTCTTCCTCTGGATACATGTTTTTCTTAGTTATATTCTATAAACACCTTTTTATTTTTAAAAAACCTTTAGTGGTGGAAATCTTTATTGCTTTATTATTATTAAAATTTTAATTTTGTATTGAGATATAGCTGATTAACAAGCAATGTAGTGATAGTTTCAGGTGAGCAGCAAAGGGACTCAGCCGTACATGTACGTGTATCCATTCTCCCCCAAACTCCCCTCCCACCCAGGCTGCCACATAACACTGAGCAGAGTTTCATGAGCTCCACAGTAGATCCTTGTTGGTTATCTGTTTTAAACACAGCAGTGTGTACATAAAAATCTTTTTAACTTCCGTTTCTTCAAATTACAG TCONS_00051977 r 3' 126999 TCONS_00051977 r 3' 131687 EMBV3_12501 GCTCATAACCTTAGGAAGTAATTTTTTGTGGTGATTTATACCACTAACATGAAACAGTGG Gene BVV0102_044897 + 1 EMBV3_30653 GK000006.2:56256471-56817517 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37061 GTCCGACGTGGACCAGCGCTGCCTGGACAGGAACCCCGAATGGGGGCTGCGGGACACCTC Variant GeneID:514636|C25H16ORF13:NM_001038106:165_cdna 379^669 7 EMBV3_28528 GeneID:514636 25 GENE C25H16ORF13 MGC134534 chromosome 16 open reading frame 13 ortholog EMBV3_05486 TAGGACCACCTTCGTGTAGCTCCTCCTCAGGGTGGGCTTTGCGGCCGTCCTCCTAATAAA Gene GeneID:518967|C1H21ORF2:NM_001075781:38_cdna Constitutive 5 NULL GeneID:518967 1 GENE C1H21ORF2 MGC139666 chromosome 21 open reading frame 2 ortholog EMBV3_23670 CCAGTGAATTCCTATTCTGAAGGTCATGATCCGAGCTCCGTGAATCCTGTGTCAATGAAC Gene GeneID:509600|GPNMB:NM_001038065:11_cdna Constitutive 0 NULL GeneID:509600 4 GENE GPNMB MGC133733 glycoprotein (transmembrane) nmb EMBV3_39257 CTGCTTCCTATGATTCAGGTAGAAGAGACTTTTAGAAGCAAGCTGAGGGGCCATCTCTCC Gene GeneID:506133|TMEM194B:XM_002685234:167_cdna UTR3_Alt 2 NULL GeneID:506133 2 GENE TMEM194B NULL transmembrane protein 194B EMBV3_39449 CCAGCACTGCTTCACTTTCTTACAAAAGGCTATGTCATTCGATTGTACCATGAGGCCAGA Gene GeneID:613774|TMEM70:NM_001099126:76_cdna Constitutive 0 NULL GeneID:613774 14 GENE TMEM70 MGC166025 transmembrane protein 70 EMBV3_00483 ATTAATCTGTGTTAAGGTTTGCCAGGCGGGGGGCGGCAGAGAGCACTTGCAAAGAACAGT Gene BVT0101_077475 + 1 EMBV3_25268 GK000002.2:38363856-38541900 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03350 CTGTTTTGAAGGTGGAACCTGGCTCATTGAATCCCAAACATCAGGACTAACGGAGGCTGA Gene GeneID:617437|RGS4:NM_001046600:344_cdna UTR3_Alt 2 NULL GeneID:617437 3 GENE RGS4 MGC137562 regulator of G-protein signaling 4 EMBV3_16114 ATTCTACCCGAGATGGTGGGCAGCATGGTTGGCGTCTACAACGGCAAGACCTTCAACCAG Gene GeneID:514569|RPS15:NM_001024541:56_cdna Constitutive 0 NULL GeneID:514569 7 GENE RPS15 NULL ribosomal protein S15 EMBV3_13212 AACAAGGGCAAGTCAATGTTGGAGTTTCAGGAAGTGTTGGCTCATTATTCACACCGAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10658 AATTTCAGATGGTCTTGCTGATAGCCCAGGCAGTCACTCCAGCTTACGTGGGCATTGGGA Gene BVT0102_201052 - 1 EMBV3_03730 GK000005.2:43445672-43570195 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40869 TGGTGGATTCGGTCATCAGTGTCTTCATGGTTGTTGCCCCACTCTCACTCATTCTGGCCT Gene GeneID:531090|LOC531090:XM_002686527:722_cdna Constitutive 0 NULL GeneID:531090 3 GENE LOC531090 NULL similar to olfactory receptor 1337 EMBV3_40110 AGTGTTTAGCCAACCCAAATTACCTTAACTGTACCCTCAGTGTTTACACATGTTAGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32372 TATAGGTCACATCTAATTACAACAGCCAGAAGGAATTGCCAAACTCTTCTTCTGGGTTGG Gene GeneID:539738|LPAR4:NM_001098105:5_cdna Constitutive 0 NULL GeneID:539738 X GENE LPAR4 GPR23 lysophosphatidic acid receptor 4 EMBV3_32501 AGAGTCTGCTGGAGGCAGTGATAGGGGATTGCCTGTGTCAGGTGGAGGGGAGCCTGAGAA Gene BVT0102_089397 + 0 NULL GK000013.2:60691977-60729757 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043286 TCONS_00043288 TCONS_00043289 TCONS_00043287 TCONS_00043290 1 XLOC_025898 Coding TCONS_00043290 XLOC_025898 NonCoding Coding RSPO4 13:60691071-60693525 j TSS32047 1708 1 TCONS_00043290_2 119 2 0.304525071341215 0.000995369834597225 2.83879144783095e-08 2.64657788028621e-11 0.000736960193868068 0.000681043842882824 0.00101878720757282 0.000366481337900269 4.01940494320632e-33 1.39361413635761e-45 0.000959716094653582 1.906442268697e-09 4.18547521572932e-06 3.22891375772194e-13 0.00178642681618605 1.30310598113293e-12 0 0 0 0.000117553188852901 0.000136793862451826 5.594914909218e-10 0 0 0 0.000357420066672354 3.53252844894208e-43 0.00121885935607476 0 1.3995176805836e-05 2.32812547300617e-09 XM_595960.4 RSPO4 PREDICTED: Bos taurus R-spondin 4 (RSPO4), transcript variant X2, 2e-51 208 100.00 0.0667447306791569 NM_001029871.3 RSPO4 Homo sapiens R-spondin 4 (RSPO4), transcript variant 1, mRNA. 2e-32 145 66.27 0.413934426229508 0 noncoding 1 1 1 1 -0.19901138031384 0.179337861987308 0.00874399087482023 0.876484144069551 GCCGGGAGTCACTCAAAAGTAATGCCCAGAACTCCAGCCCAGGCTGTGCCTCTGAAAAGAAACCCCAATCGGAAGAAGGGCCAGAGAGAGCGGCGCCCTCGCAAGGACCGGAAGCTGGACGGCAGGGGGGATGGGAGGCCCCGGCCAGCGCCCACCTAGGCGCCCAATCTGCAGCCAGGGCCTTGGCCAATTCAGGAGTTCTCTCTCACCCCTTCACTCTCTAGCTGTTCCCCCTCCTCTCCCTTCCCTGTTCTCTTTTTCTCACTCACATCTCCTCTCTCTTTTCTCCTGCATTTCCTACATTTCTGCCACCTCGGTTTTCCCCTCCTTCCTACCCTTTCTTTCTCCTTTTTCTTGCTTTCCTTTTATCTTTTCCTCTCCTCCTGTTTTTCTCCACTGTGTCCCCACCACCACCATGCACATATTAAGACAGAGACCAACTCCTGTGCACCCCACCCCCCCCAACTTCTCACTCTCTATTCCTCCTTAAAGAAAGCACACTTCTTTTTCTAGGTCTTTCCCTGATCCTCCTCAGCCCCATTGCAGAGAAGGTGTTTCTAAGAGCGGGGCCCAGGCCACAGCCAGGCAGGCTGGTTGAGTCCTGAGAGCCCTACTTCCACTCCAGAGGAGACTCTGGAACCCTGAGCTGTGGGTGCCTCCAGCTCTAGCCCATCCCTAGAGGCATCTCCACAGCCCCCAGCTTCCCTGGGAAGCCCCTGGAAGAGGCTCCGCAGGCTTCTGGATACCCCAGCTGGCCATGGAAGAGCCGTGACGGGGCCTCTGGCCGGACAGCCAGCCTTGTGCCGAGTCCACCCTTCTGGAAGCTGCCTGCTGCACGCATCAGTGCTCCCTCAGCACCCTCCCTCTCAAGGTGCCCTGGCCCCTGTTTCCCGAGCTGCTGGTCACCTATGTCCTGCGTCCCAGCTCATCCCAGAAGAGGCCATGCAGGCTGAAAGGAACTTCGAGATTCTCCAGGCCACTCCATTCCCTCCAGCTCCTCCTGCTTGTTGTACCTCTGGTGAGACTGAGGCTGAGAAGGGACTTGTCCAAGGTCACCCAGGGATCCCATGGGCTGTGCCTTCCACTTGCTCACCTGCTCAGCACACCCACAGCTGCAAGGAAGCCTTGGGAGCCTTGGGGAGGTGAGGAAGGAAGTTGTCGGGTCAGAAGTAAGGGAGGATTCCCCTCCTCACCCACCTCACCCCTGACACCCCAGCCTGTGGCACGCCCCCCAACCACCAGCCAAGGCCATACACCAGCAGGAAGAGCAAGACAAGGCACCTCCTCACTGCCTGTCACTCCACCATCAAGTGCCTCCCGTCTCCTTTGCTCTCCTAACTCCCCAGAAAGTGGTGCTTCCTGCATTGGCATTGCCAGCAGCCAAGAACAAGGAGCGCATGAGACCCCAGGGTCCCAGGGTGGCCTGGAAATGGGGGTGTCAGCAGGCCGGAGGAGAGGCTGAAGGTGATGAAGAAGGACAGCCCCACCCAGAGACAGCGCCCATTCTCAGGCTCCCCTCCACCTGACACAGGCAATCCCCTATCACTGCCTCCAGCAGACTCTGGGGGCCCTGTCCCCCAAGGCCTCACTCTTTGTCTCCCTGAGGTCAGCAAGAGCCCCTCACCTGGCCAGACCACTAGCTTCTTTTCTGCAAAAGTTAGTGCCTCTGAAATGCTCTGTTGTTGTTTCAAGACTCTACTTTTTTTTT EMBV3_30756 CCCACCAACTTTTGCAGTCCTGATGGTCAGCCAACACTTCTTCCACCAGAACATGTACAG Gene GeneID:541075|TMEM168:NM_001078031:72_cdna UTR3_Alt 2 NULL GeneID:541075 4 GENE TMEM168 MGC152038 transmembrane protein 168 EMBV3_18728 TTTCTGAGGTCTCCTACTGGGGCGAGAGGCTTCTGTCCTTTCACTCTCAGTTTACAGTCC Gene BVV0102_210129 + 0 NULL GK000019.2:22439071-22457711 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17684 AACCAAGTCAGCTGCTTTCTCAGCAGCCGGCAGTGAACCGGAAACTCCAAAAGAAGTCCT Gene GeneID:521181|SLC15A1:NM_001099378:49_cdna Constitutive 0 NULL GeneID:521181 12 GENE SLC15A1 PEPT-1 PEPT1 solute carrier family 15 (oligopeptide transporter), member 1 EMBV3_26529 TGCAACATTATGGGGTTCAGAAGAAAAGAGAAAAGGAAAATATACTATTGCTATGGCTGC Gene BVV0101_054253 + 0 NULL GK000030.2:15128620-15196880 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15542 ATGGTTTTAAGCATGAAAGTCACTCAGAGTGGTCCACCCAAAAGGCACTCCTAATAGAAC Gene BVV0102_270462 + 0 NULL GK000024.2:26377203-26396996 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11605 TGTCTTGACTCCCAAATCAAGCTCCTGTTGGACTGACCCTCCCCTTAACGTCCCTGTGCA Gene GeneID:515570|LOC515570:XM_002698036:253_cdna Constitutive 0 NULL GeneID:515570 25 GENE LOC515570 NULL NOMO3-like protein EMBV3_22730 CCCAGGGGGTGCTCTTTGTGGATCAAAGGGATTTGTGGGTAGTTCATAGATCTCCAACTC Gene BVT0102_315695 + 0 NULL GK000007.2:39481387-39597616 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212872 TCONS_00212874 TCONS_00212876 TCONS_00212873 TCONS_00212871 TCONS_00212875 1 XLOC_130276 Coding TCONS_00212875 XLOC_130276 Coding Coding TSPAN17 7:39472616-39482842 = TSS159600 2888 1 TCONS_00212875_3 270 0.068213296398892 8 0.718337408312958 6.91225765721841e-31 6.30879752025956e-12 8.63602679907525e-05 1.67864963373419e-15 4.99484274158696e-26 1.92210538480643e-21 2.30030485944233e-25 5.8239118097705e-16 0.000100990718715448 2.58144821110378e-14 1.49160347252316e-15 4.26460890662232e-12 7.05520096725826e-20 4.08138819412137e-23 1.10078543038987e-09 0.0011204183971783 0.000205879864388544 0.00124637884498821 1.61355707718617e-07 1.73236268733852e-08 3.49401928409413e-09 0.000257653541629015 0.000234173588560905 0.000336512194075843 5.55620752317124e-24 1.0885721350094e-07 0.000448352430051458 6.43595814359092e-05 6.57227378819537e-08 0.00059429043456367 XM_005209133.1 TSPAN17 PREDICTED: Bos taurus tetraspanin 17 (TSPAN17), transcript variant 0.0 2742 100.00 0.525969529085873 NM_130465.4 TSPAN17 Homo sapiens tetraspanin 17 (TSPAN17), transcript variant 2, mRNA. 0.0 1436 94.57 0.318559556786704 TCONS_00212875_3 sp|Q58DN3|TSN17_BOVIN TSN17_BOVIN Tetraspanin-17; 0.0 544 100.00 0.996296296296296 1 coding 0 0 1 1 -0.044470390044545 0.720416631671483 0.0156509526802151 0.783769298814069 GAAGCCGCAGCCGCCGGGCTAGGCCCCGGGCGGCTCTAGCCCAGGGCGGCCCGCTGAGGGCTGGGCCCAGCCTCCGGGCCCGGTTCCCGGGCCGGCGTGCGGCCACTCACCATGCCCGGCAAGCACCAGCACTTCCAGGAACCCGAGGTCGGCTGCTGCGGGAAATACTTCCTGTTTGGCTTCAACATCGTCTTCTGGGTGCTGGGGGCCCTGTTCCTGGCCATCGGTCTCTGGGCCTGGAGTGAGAAGGGCGTTCTCTCCAACATCTCGGCACTGACAGATCTGGGAGGCCTTGACCCTGTGTGGCTGTTTGTGGTGGTTGGAGGCGTCATGTCCGTGCTGGGCTTTGCCGGCTGCATTGGGGCCCTCCGGGAGAACACCTTCCTGCTCAAATTTTTCTCTGTGTTCCTTGGCCTCATCTTCTTCCTGGAGCTGGCAACAGGGATCCTGGCCTTCGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCTCTTCATCAACAACAATGTCAAGGCCTATCGGGATGACATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATACTGGTCTTGCTGCGGAGCCCGAGGGCCCAACGACTGGAACCTCAATATCTACTTCAACTGCACTGACTTGAACCCCAGCCGGGAGCGCTGCGGGGTGCCCTTCTCCTGCTGTGTCAGGGACCCAGCGGAGGATGTCCTCAACACTCAGTGTGGCTACGACGTCCGGCTCAAACTGGAGCTGGAGCAGCAGGGCTTCATCCACACCAAAGGCTGCGTGGGCCAGTTTGAAAAGTGGCTGCAGGACAACCTGATTGTTGTGGCAGGGGTCTTCGTGGGCATCGCCCTTCTCCAGATCTTTGGCATCTGCCTGGCCCAGAACCTCGTCAGCGACATCAAGGCAGTGAAGGCCAACTGGTGAGGCTGCCACGCTGGCCATGGCCATTCGCCTGGCTGACCCAGGGACCCTCCACTCTGCCCATAATGGGCAAGGCTGCAGGAGGTGTTTCTGCTTGGACCTGAAGCCCACATGGGGCTCGCAGGCCACTGCACTGTGCGCCCATGGAGAGCCGCATGGCTCTGTCCGGCTGCCTGTCCTGGAGCTGTGTGTACGGAGGGTGGGTGTCACAGGGAGCCGCCGTCTGGGCTGCTGTTGGGTGGTTGGCTCTCCAGGGGACTAGGAAGGGCCCAGCTAGGAGGGAGCAGGCCAGGTGGGGTGGGCTTGGGGACTGCTGTTGCCTGGGACTCAGTCTCACGTATCTCAGAATTCTCTTCACTAGTGATCCCTCCAGGAGCCCACTTCAGCCTCAGTGTCTCAGACTCTAAAATGGGTCCAAGAATCTTCTCTCCCTTGCTTGCCTCTCAGGATCAAATATGATGACGGCTACAAACTACTCAAATAAACAAATCCTTGAAAACCCGTGGCTTCAGCCCAGCGTCCTGAAGGTTCTGTCAGCTGCAGAGCTCTCCACCTTGGGCCCTGGCCAGACCCACTCCGCCAGTGCATTTTCTTGGTCTGGGTAGTATATACATTTGAACCAACCTTTAAAACGTGGTATGTTTCATGTAAAAGTCCAGATCCCAAGCTTCTCGTGAAGATTGGCCATCCGGCCCCCGCTGCTCTTGGGACGTCATCATCTCCCGCGTGCTTCCTGTTCTCTGAGAGACCCACCTGGCCGGTGCTGCTCACCCTGTAGGCTGGGGTTGACCTCCCCTCTGCTGTAGGGTTTTCCCCTGAAAACACCTGGAGGCTGCCATGGGCCAAGCCTGGAGTGAGGCACAGGGATGTGAAAAATGAAGAGGCCACACAACTTGGGTGGGGTCCAACCCCACTGGAGACTGAGATGGGTGCCCAGGAGAGTGGCTGAGGTGTGGAATGGAGATCAGGAAAGTTTGGGGAAGGAAATAATTGGAAGTCAAAAACTTGGCACCCATAGGGTTGGCGGGGAGCCTGCTTTGGGGCCCATGGTGGTTGATGCCGGGTCTCACTTGAAATCAAATGGTGGCCCGCAGAGCTGCCTCATGACCACCAGAGGGCGCTCCAGCACAGCTTTGCTTGGGTCTGGCGACTTAACACTGCAACCTCTTGTACAGCCAAGTGGCTGGTGTGTCCACCCTGCTTACCAGTGCTTCTGATTCAGGGAACTTGAGATCTTTGAAAAGAGTTCAGACTTGGGAAGTCTGACTGTTGCTCTCAGCTCTGCCTCTTAGCTGCATGAAGGGGTGTGTGGCAAGTAAATGGTGCACCCATCCACCCAGGGGGTGCTCTTTGTGGATCAAAGGGATTTGTGGGTAGTTCATAGATCTCCAACTCAGATGCTCTTAAGGTCACGTAGGTCATATAAATGAATGAAGTAGGCCTTTGACTTGTGAGGCCTTTGCAGTGCAACTGACTTTCCTACTGTCCCTGAAGACCACACAAAGAGACATTGCTTTGTGACCAGAGAAATATTTGGGCCATTGAGTTGATGATGTACCTTGAGATACAATAGAGTATGGTGGGGACTGACAGAGCATAGATCCCCATCTGAACTTTGTGACTGTCATTTAGTTGTGGCTAATTGCTATAAAGTGGGAATGCAGGTCTAATGTCAGAAATCCAGAGAAGCCAGGAATTCAGGATTTTATGTGAAATAGACCTATTTTTAAGTTGTTAACTAATGAAAAAAATTTAAATGCTGCAAGCCCAATGAAAGGTACAGCTTTGGTGCCTGTGACACTGCAGATCCCTCTGGGATAGTCGTCTGCTGGAGTCCTGGCTGCTCTGCCATCCAGGGATGCTGAGAGCTGCTGCTGGGAGGGCAGGGTATCGGGTATGCAGCCAGCATTGTGGCTCCCAGATGCCAGCTGGACAGTGTGTACCACAATAAATGCAACTCACAGTAT EMBV3_42936 CAACAAAAAAAGCAACAGTAATCTATGTGTTTCTGTAACAAATTGGGATCTGTCTTGGCA Gene GeneID:524361|PPP2CB:NM_001075857:25_cdna Constitutive 0 NULL GeneID:524361 27 GENE PPP2CB MGC143390 protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform EMBV3_33987 GTTACTGATGACCTGTACATGATATTTCTAGTGTCCATAAGATTGCACACCACCTTGTGG Gene GeneID:523874|LOC523874:XM_002688146:9_cdna Constitutive 0 NULL GeneID:523874 6 GENE LOC523874 NULL similar to hCG40928 EMBV3_08191 GCTATGGCCAGGATAACACCACCAACTATGGGTATGATTCCTACGAGGCCTGTGACTCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09720 CGTCAAGCCATCTTTCGCTGGGATCTATGAACCGGAAGGCTCGTCCTTTACGTGACTCTA Gene BVV0102_063642 + 0 NULL GK000023.2:47871934-47883555 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133606 TCONS_00133605 TCONS_00135403 TCONS_00133607 TCONS_00133604 2 XLOC_081153 XLOC_081706 Coding TCONS_00135403 XLOC_081706 NonCoding NonCoding - 23:47873071-47889652 - TSS100742 1471 1 TCONS_00135403_1 104 0.053025152957172 2 0.911399276236429 0.00106016493510584 0.000747465839591862 0.00166971183325049 0.000120771530514898 0.000141612950762051 0.00023786461846267 0.00063154244514835 0.000164387094553218 0.00141403896833608 7.67919927146452e-196 0 0 0.000475053360868369 3.8364985065228e-05 2.75280567858716e-25 0 0 4.03412801653643e-29 0.000532377238563819 0.00186208765851083 0.000681025920062885 0 1.69496453963273e-113 0 0.00143078441694335 0.000359078340548108 0.000660334684644826 0.000177297018971374 3.62976152882976e-117 0 NM_025965.3 Ssr1 Mus musculus signal sequence receptor, alpha (Ssr1), mRNA. 4e-08 64.4 82.09 0.0448674371176071 0 noncoding 0 0 0 0 0.21822587377518 0.634305759160601 -0.053138531481586 0.370785627348762 TGCGGCTGCGTTTGAGTCCGGGGGGAGCTGAAGCCCTGGGGGTGAATTTTTAAGACTCATTTTGCTTTTTTAAAAAATAATAGCTTTAGGTTCACAGCGAAAGTGAGAGGAAGGGGCTGCGATTTTACCCTCCACCTGCCCCCATCCTCACGCCCCCACCGCAGGAGGGGCCTCTGTTGCAACCACCGCCCCTGCTCGTGCCTGTCCCCCAGATCGCGGTTCACACGAGGGCTCCCTCTCTGCCGGCCGAGGGCTGAGATGTCCACGCACCCAGCAGCACACCTCCCCCCAACACCCAGTGCTACCTAGTCGTCACCCCAACTGCAGTGTGTGTGTGTGTGCACGTGTGAGTGTGTGTGTGTGTGTGTTTGTTTAACTGGGGGAGCAAGAAAAGCCTGGAGACTGGCTTCTTGGAGGCGAGTTTCACAGGATTCCACAATGATTTCAAAGGGGCTGGGAGCCGGGATGAGCATCACCTGGAGGAGGGCGGGTCAGGGGTCAGGGGGCGTGGTGGGCGGGCCTGGGAGGCACGTGGTGGGCTCGGTGACCCCCGGTGGGTGCCCGGGAGGTGAGGGGGGAGGCCGCAGCCAGTGGCCTTTGGAGGGCCCGGGATTAGCGTTGAGAGTCCAGAGCGCAGCCCTGGTGGCAAGTGGGGTCAAGGAAGGCAGTTGTTGGAGCACAGCTGGTTCTGGAAACATCCCGGGCGGAGTGCAGGGCGGAGCGGAGCCGGAGGCCTGTGGAGGAAAGGGCTGAAGTCGTGAAGTCGTCCCGGCCCAGACCCCATTAGGTTTCCACACGACTGTGAACTAGAAGCTGGGGGCAGCAGGCCAGCGGAGGGGCGGACCCGTCCACGAGGTGACCATCACAGACGCCTGCCTGAGGGACAGCAGACAGGGCCGTCAAGCCATCTTTCGCTGGGATCTATGAACCGGAAGGCTCGTCCTTTACGTGACTCTAGGGGATGCTCGGTTTTCCTGGGAACCCCATCTGCACGGTGGACGGGACCCATGACTCCCTGCGCCCCGCCCTGGGCAGAGAGCACGGGCATCTTCACTCTCGCCTCCAACACCAAGATGAGCTTGTCAATCCCTGAAAACAAACATCTATCCTGAAGTGTTTTTAACCACCATGATTTTGAAATAAATAACCGTGAAGTTATCTGTACTTGCTAGCTGCCAGATTCTAGAAAACCCAGTATTTGTAAGCTGCCCCAGTGCTTGGTTTGATGGCTTCCGCCTTGACCCCGGTGCAGGGAAAAGGATGTGAAGGTCGTAGAGTCAGTCGGGCCAACCCCAGAGGCAGTCTGTAACCTCATGCGAACTTCTTCAACTCCGGAGGTTTGGTTTTTTCCTGGTGCGTAAAAGGAACAGCGTCACCTTTCAGCAGACTGTTGTGAGGGTTTAGGAGATGAACGGAAAGGCCCAGCAGAACACAGCATGTGGTTGACATTTTCTAAGTTCTTTCCCTGCCG TCONS_00133604 TCONS_00133608 r 5' 0 TCONS_00133604 TCONS_00133608 r 5' 0 EMBV3_31659 TCTCGTGCCTGGGTCAGATGAGAAGAGGCCAGTGTGTTATTTGGTTTAGGCCTGCCGATA Gene BVT0102_043672 + 0 NULL GK000027.2:112267-216368 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01722 ATGTGAGGAAGCAGGAGAAGGCAAGCAAATTTGCACGAAGGCCTGGACATGTGGGAGCAC Gene BVT0102_195385 - 1 EMBV3_01851 GK000013.2:63692402-63704816 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01746 GCTTCTGGAACTACCTTATTCTGCACCACGTTTTACTACCAAGCTCTGAGTGGAGACCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40368 GACCCTGCTCTTCTCCTTCGCCCAGGCCGTGGCCAAAGCAGCCCAGGCCAGTGACCTGGA Variant GeneID:513453|TALDO1:NM_001035283:272_cdna 584^880 5 EMBV3_36799 GeneID:513453 29 GENE TALDO1 MGC133714 transaldolase 1 EMBV3_26999 AAGTCCAATCTCCCATTCGAGTTGCGAAGGAAAGCTGGGGATTGCTCTCGAGTGACTGCA Gene BVT0102_270821 + 1 EMBV3_34827 GK000011.2:79494240-80245327 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00178735 TCONS_00240375 TCONS_00149039 TCONS_00148450 TCONS_00033207 TCONS_00178732 TCONS_00149040 TCONS_00218950 TCONS_00206816 TCONS_00149037 TCONS_00218953 TCONS_00098202 TCONS_00117596 TCONS_00167122 TCONS_00098200 TCONS_00162301 TCONS_00230834 TCONS_00088420 TCONS_00206815 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00201119 TCONS_00154285 TCONS_00050935 TCONS_00131536 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00178730 TCONS_00178729 TCONS_00161424 TCONS_00253351 TCONS_00233533 TCONS_00088422 TCONS_00218954 TCONS_00106013 TCONS_00238290 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00106012 TCONS_00230355 TCONS_00222176 TCONS_00240373 TCONS_00223049 TCONS_00157045 TCONS_00231769 TCONS_00033186 TCONS_00054136 TCONS_00130054 TCONS_00207410 TCONS_00056187 TCONS_00157046 TCONS_00011614 TCONS_00063809 TCONS_00178734 TCONS_00158779 TCONS_00162571 TCONS_00220551 TCONS_00186835 TCONS_00222177 TCONS_00142474 TCONS_00218948 TCONS_00142473 TCONS_00230354 TCONS_00148446 TCONS_00207147 TCONS_00142472 TCONS_00129561 TCONS_00021875 TCONS_00207544 TCONS_00157807 TCONS_00231774 TCONS_00011613 TCONS_00066112 TCONS_00185570 TCONS_00176791 TCONS_00167922 TCONS_00186489 TCONS_00238284 TCONS_00230829 TCONS_00104289 TCONS_00157808 TCONS_00071703 TCONS_00185581 TCONS_00131535 TCONS_00238280 TCONS_00232767 TCONS_00031770 TCONS_00178886 TCONS_00222184 TCONS_00249554 TCONS_00231772 TCONS_00156869 TCONS_00162567 TCONS_00106011 TCONS_00106016 TCONS_00231775 TCONS_00033206 TCONS_00098201 TCONS_00107076 TCONS_00158314 TCONS_00071451 TCONS_00136035 TCONS_00186834 TCONS_00154284 TCONS_00071397 TCONS_00072307 TCONS_00012044 TCONS_00131538 TCONS_00178731 TCONS_00063811 TCONS_00207543 TCONS_00111146 TCONS_00212984 TCONS_00222175 116 XLOC_090921 XLOC_108508 XLOC_147039 XLOC_090916 XLOC_090330 XLOC_019441 XLOC_108505 XLOC_090917 XLOC_132269 XLOC_125336 XLOC_090914 XLOC_132272 XLOC_058448 XLOC_071762 XLOC_101958 XLOC_058446 XLOC_099183 XLOC_140324 XLOC_053207 XLOC_125335 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_122767 XLOC_094045 XLOC_031050 XLOC_080241 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_108503 XLOC_108502 XLOC_098315 XLOC_156291 XLOC_143015 XLOC_053209 XLOC_132273 XLOC_062697 XLOC_144957 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_139845 XLOC_135485 XLOC_147037 XLOC_136355 XLOC_095505 XLOC_141257 XLOC_019420 XLOC_031945 XLOC_078765 XLOC_125926 XLOC_033990 XLOC_095506 XLOC_007165 XLOC_038535 XLOC_108507 XLOC_097231 XLOC_099452 XLOC_133868 XLOC_112886 XLOC_135486 XLOC_086899 XLOC_132267 XLOC_086898 XLOC_139844 XLOC_090326 XLOC_125665 XLOC_086897 XLOC_078274 XLOC_012548 XLOC_126059 XLOC_096262 XLOC_141262 XLOC_007164 XLOC_040830 XLOC_111623 XLOC_106565 XLOC_102758 XLOC_112541 XLOC_144951 XLOC_140319 XLOC_062346 XLOC_096263 XLOC_043473 XLOC_111634 XLOC_080240 XLOC_144947 XLOC_142251 XLOC_018015 XLOC_108659 XLOC_135493 XLOC_152497 XLOC_141260 XLOC_095329 XLOC_099448 XLOC_141263 XLOC_019440 XLOC_058447 XLOC_062987 XLOC_096768 XLOC_043222 XLOC_082254 XLOC_112885 XLOC_094044 XLOC_043168 XLOC_044076 XLOC_007594 XLOC_080243 XLOC_108504 XLOC_038537 XLOC_126058 XLOC_067046 XLOC_130301 XLOC_135484 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_29475 TTGCCCTCCCACCCATCAGCACACGACTTTTGTGTGGTTCCCCTGACATGCTTTTAGATT Gene GeneID:509707|GPR1:XM_002685535:115_cdna Constitutive 0 NULL GeneID:509707 2 GENE GPR1 NULL G protein-coupled receptor 1 EMBV3_24639 GGGTGGGGGATGAAAGGATAAAGCCATAGTTTCGTTACCTCAGTCACTCCAAAAGTACGC Gene GeneID:100125289|C6orf120:NM_001103331:2_cdna Constitutive 1 NULL GeneID:100125289 9 GENE C6orf120 MGC140336 chromosome 6 open reading frame 120 ortholog EMBV3_06069 AAATCAACAACCTGTATCCGTGTCAGGCCGGGAGACAGATGAGGAGTGAGAAGGAGAAGG Gene GeneID:616227|CAMK2N1:NM_001114520:281_cdna Constitutive 1 NULL GeneID:616227 2 GENE CAMK2N1 NULL calcium/calmodulin-dependent protein kinase II inhibitor 1 EMBV3_22945 CGTGACCAGAGACCATGGAAGCTCTGTGACCCTTCCCATATAACTTGCCGAATGCATCTT Gene BVT0102_244340 - 1 EMBV3_31246 GK000012.2:21463535-21488035 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038735 1 XLOC_022556 NonCoding TCONS_00038735 XLOC_022556 NonCoding NonCoding - 12:21472074-21473729 - TSS28236 1655 2 TCONS_00038735_2 92 0.880966767371601 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000319173020918393 0.000401264180602435 0 0 0 0 0 0.000227272415500966 0 0 0 0 0 0 0 NM_001110063.1 MITD1 Bos taurus MIT, microtubule interacting and transport, domain containing 1 (MITD1), mRNA. 6e-57 226 88.04 0.109969788519637 0 noncoding TTCTCCAATACGTGAAAGTGAAGTCGCTCAGTCGTTTCTGACCCTCAGCAACCCCATGGACTGCAGCCTTCCAGGTTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTAGAGTGGGGTGCCATTGCTTTCTCAAAGATGTCCTAGCCCCAAATAATCTCCCCTTTTTTGTGCTGATACCTTCACTGCCCACCCGTCCACCTGTAAGAGCCTTCCATTTATTTGTCTGCTCCTTGGAGTGTGCTGCCAGTGCCGGGTGAGAGGCCGCCTAACCCTCGTGCTCCTGCTCAGCTGCAGCTGACTCTCTGCGACCCCATGGACTATAGTCGCGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCACACCCGAGTGTCTTGTGTCTCCTGCATGGGCAGGTGGGTTCTTTACCACTGCACCGCCTAGGAAGCCCAGTGCCAAGCAAGATGGACTTTAAAGCAGAGACTGTTATCAGAAACAAAGGGACCTTTTATAATGATAAAAGTCAATCTGCCAGAAAGATAGAAAAGTCATAAACATATGCTCTCTGATAACAGAATACAAATACAGATGAACCAAGAACTGACAGAAATGGAAAGAAAGATAATTCAACAGTATCAGCTGGATACTTCAATTCCACTGTTAATAACAGACAAAAAAACTAGGCAGAAGGTCAAGCAGAAAATATGTGATACTGTTGTCTTATAATAAGACATACGTATTTGGTCTCCATTCCCTTTCTGGCACAGAGGTCCTAAAACTCTTGGAATTTCCAGAGTGCTAGAAAAAATGATAAAGGTGTCTTTTGTCACAGCTAGAGAAGTGACTTCTAAAAGACCCAAGGATAGGGGCTGGTGGCCAGGGGAACCAAGAGGTGATTCCAGGGTTCAAACATTTAGTCCCACCGAACACTCTGGGGAGGATAGAGTGTCTGGAGATCAAGTTCAACCACTGACAGCCAATGATTTAATCATTCATGCCTCCATAACAACCCCAGAGGACTGGTTTTCTAGACTTTCCAGGCTGATGACCACGTGAAGACTTGGGGAGAATGGCGTGACCAGAGACCATGGAAGCTCTGTGGCCCTTCCCATATAACTTGCCGAATGCATCTTTGTCTTCCTGCAGTTCCTGAGTTGTACCCTTTTGTAACACACCGCTAATCTAGTAGATAAATGTGTCTGAGCTGTGGGCCCCCTTAGCAAATGAAACCCAAAGAAGCACAGGTGACAACCTGGACTTGTGACTGGTGTCTGAAGCGGAAGGACAAAGGGGCCCGTCTTGCAGGACTGAGTCCTTAACCCATGGCAGCTGATGCTCTCTCCAGATACACACTATCACAAATGCATTAAATTGTAGGACACCCACTGGTGCCCGAGAATTGTTTGGTGTAGGAGGAAAAAAACACACACTGAAATTGGTATCAGACTCACAAGAGAGAAAATATGAACAACTAACATATCTACAGAACCCTCCTCCCAACAACTGTATAATATTCATTCTTTTCAGGTACACATGAGCGTTCTCTAGGCTTCACCACATGCTAGGCCATAAAACAAACCTCAGTTCACTTAAAATAACAGAAGCAACACAAAG TCONS_00036481 . 5' 8308 TCONS_00036481 . 5' 8308 EMBV3_12883 GTTCCAGAAGAGCCATCTGAGCCTGTGCCGCCTCTTATAGTTGATCATGAGAGACTGAAG Gene GeneID:518785|LOC518785:XM_002691468:332_cdna UTR3_Alt 2 NULL GeneID:518785 11 GENE LOC518785 NULL similar to ATPase family AAA domain-containing protein 2B EMBV3_33976 GGAGCTGAAGAAGGAGACAGACTTCGAGCACCGGATCCCCAAGGAGCAGTGGTGGTTGAA Gene GeneID:507119|PFKP:XM_002692192:86_cdna Constitutive 0 NULL GeneID:507119 13 GENE PFKP NULL phosphofructokinase, platelet EMBV3_13918 TGACACAAACTTCCTTTGAAAATGTGCCTAGCTTACCATAATGAATGGGGAAGGGTGGGG Gene GeneID:617293|ELOVL5:NM_001046597:362_cdna Constitutive 2 NULL GeneID:617293 23 GENE ELOVL5 MGC128086 ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) EMBV3_32092 CAGGGAGCTAATCCTCTAGAAAGGGTTCCCAGCACAACAGTTTCAGTCAACGCTTGGAAG Gene GeneID:525164|TRIAP1:NM_001079776:207_cdna Constitutive 0 NULL GeneID:525164 17 GENE TRIAP1 NULL TP53 regulated inhibitor of apoptosis 1 EMBV3_35813 ACTTCCGGTCAAGCCCTGGAGCCCCCAGCTGAGACCTTCTTATGTGTGATGGAGGCCAAA Gene GeneID:518778|TXLNB:NM_001102051:8_cdna Constitutive 0 NULL GeneID:518778 9 GENE TXLNB MGC155187 taxilin beta EMBV3_08153 GTATCCTTAAAATGACCCATAAGACCCCACAGGTTCTGGCTTCTGGCTTCTCCCTGCTTC Gene GeneID:505624|FBXL21:NM_001034252:10_cdna UTR3_Alt 2 NULL GeneID:505624 7 GENE FBXL21 MGC128882 F-box and leucine-rich repeat protein 21 (gene/pseudogene) EMBV3_27205 AATGGTAAGACGTGAGGATTTATGAACGGCTCTTGCCTTCTTTCACCCAGGGAGCCACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35496 ACTCCACGGAGCACAAGCAGCAGCAGGAAGGGGTGTGTGCACCCAGGCTCCCTGCTACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29002 GGTAAGTTTCATTTTTGTAGGAGTGGATCTGTTTCCTGTGTTTTGAGCTTGATTGGCATA Gene BVT0102_024617 - 1 EMBV3_26990 GK000012.2:73190991-73516166 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037245 TCONS_00037247 TCONS_00037249 TCONS_00037243 TCONS_00037248 TCONS_00037246 TCONS_00037244 1 XLOC_021341 Coding TCONS_00037244 XLOC_021341 Coding Coding - 12:73312668-73497494 - TSS26929 2811 1 TCONS_00037244_1 302 0.255425115617218 8 0.984834302718788 0.000175093009004444 8.03922127492117e-14 0.00010206920633725 2.20541947190767e-09 1.94291292228878e-05 2.97186049781598e-15 0.000168489562294763 0.000705683207591091 0.000228987719768049 2.57615119745847e-08 6.97146601685769e-12 4.57163868141537e-17 2.29444947075856e-05 9.1021817327237e-11 2.68615310257776e-69 1.65229604915929e-28 2.86499963081239e-34 2.87008191710836e-19 5.84498753083268e-40 0.000347737819567671 2.19142208778337e-05 0 0 1.37931572992348e-60 5.34077249225852e-05 6.89204895511634e-07 1.09418738720035e-16 1.00178975306978e-14 0 1.05822818411998e-22 XR_236785.1 LOC101904517 PREDICTED: Bos taurus uncharacterized LOC101904517 (LOC101904517), 0.0 2937 100.00 0.578797580932053 XM_005254025.1 ABCC4 PREDICTED: Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (ABCC4), transcript variant X1, mRNA. 0.0 677 82.47 0.23834934187122 TCONS_00037244_1 sp|O15439|MRP4_HUMAN MRP4_HUMAN Multidrug resistance-associated protein 4; 1e-112 358 74.58 0.791390728476821 1 coding 0 0 1 1 0.224845104753035 0.341445769397516 0.0568783092573673 0.307703324293578 AATGGTTCTTGCAGACATAAAGATGGAAGTCTGAATAATGACTTGATTCTTCACCTATATGATATTGTCACATATATCTTTGAACCCCGGGAAGATTGGCCTGGTGCTCTCTCTCGCCCTCACGCTCACACTCACGGGGATGTTCCAGTGTTGTGTCAGGCAAAGCATTGAAGCTGAGAATATGATGATTTCAGTAGAAAGGGGAATTGAATATACAGAGTGTGAGAAAGAAGCGCTCTGGGAGTACAATTTTCAACCACCACCAGCCTGGCCCCATAGAGGAGTGATTGACTCTTACAATGTGAACTTCAGATACAGCTTAGATGAGCCTCTGGTAATGAAGGACCTGATACCATGCATATTCTCAAGTGAAAAGGTTGGCATCGTGGGAAGAACAGGAGCTGGAAAAAGTTCCCTCATCGCTGCCCTTCTTAGATTATCAGAGCCTGAAGGTAGAATTCTAATTGATGACATCTGGACAACTGAAATTGGACTTCACGATTTAAGGAAGAAAATGACAGTTGCACCTCAGGAACCTGTTTTATTTACTGGAACAATGAGGAAAAATCTGGATCCCTTTAATGAGCATATGGATGTGGAACTGTGGAAAGTCTTAGAAGAGGTGCAACTTAAAGAAGCCATTGAAGGTCTTCCTGGTAAAATGAATGCTGAATTAGCAGAATCCGGGTTGAACTTGAGTTCTGGACAGAGAGAATTGGTGTGTCTTGCTAGGGCTATCCTCAGAGAAAATCGAATATTGATTATTGACAAAGCCACATCGAATGTGGATCCAAGGTTTTGGATTCAGGGAGACTGGAAGAAGATGATGAACCATTTGTTTTGCTGCAAAATAGAGACAGTCTGTTTTACAAGAAGGTGCAACAACTGGGCGAGGTGGAGGCTGCTGCCTTCATTGAAAGGGCAAAACAGGTGCACACTGAAAGGAAATAGCCAGATATTACAGTGACCGTGTGATTATGAATATTTCCGGTGGACAGCCCTCAACCTCAACAATTTTTGAGTCAATGTTCTGTTTCTACCATGAGTTCATGTCTATTTCAAAGGCATTTTTCCAATAGGTTTTTGCACTGCATAAATATATTATACATTTTTTACACCAGCAACAAATATTTACATATTCCAAGATGTTAATCTATAATTTTTTCCTCCAACTTCACTCAGTGATTTCAAGCTCTTGCAAAATGATTTGTTATGTTTATTTATATGTTAAACTATTTTCTTTCTTATCCAAATCAGAAGTTGCAGGCCATCAATAAAAGCTGTCTCCCAGGTTTTGTGTCTTGAGAGACTCCAGAGCCAAATTGATTTTCTAAGATTTGAGACAAAGTTGTCACAGATTATTTTTTTAATATTCCCAGAATTACATGTTATTTCCAATTACATCAGGGATTCTGTTTACTTGAAGACTGTGTGAAGTTGCCATTTTGTGTAACCACTTCCTTTAACAGACCTACTGTCCATTTTTCCACTCAAAGACCTCTAGTTAAAATACTACAGAAAAAACTAATAGGAAAAACACACCTGTAGTTTAAATGACATTATAGAAGAGAGAGGTATCACCCTCCAAAAAGAAGTATGTTTAAAATACAGAGGGACAATATTATGTGTTCTTCTCCTGTGTCTCCTGCATTGCAGGCAGATGCTTTACCACTGAGCCATTGGGGAAATCCTCTAAAAGAGAAGGAAGAGAAAATATGTTTTATCAAAGTAGGAACTCTTCCAGGGTATTTGCTAATGAAGGACAGCCATGTTCTAGACTGTCTTCTAGATAGAAGATTTTATTTTTTTACATTTTTAAAAAATTGTGGTGAAGTATATATAGTATAAAATTTGCCATATAGCCATTTTTGATCATACAGTTCAGTGGCATTAATCACATTCACAGTATTGTGCAGCCACATTGTCTGGGTAACTTTTGGTAATTATGTGCTTCCTATTAAGTGTGTTATTTCTGCAGAGTCATTTTGGTAAGTTTCATTTTTGTAGGAGTGGATCTGTTTCCTGTGTTTTGAGCTTGATTGGCATAAATGTATTCACAATACCTTATATATTTAAACTACAGCATCTCTGTGTTGTTTGGGCTTTTTAATTTTCTTTGAGCCTTCTATTTTTTATTAATAATCTTGCATAACTTTTTTCCTTTTTTCAAAGAATTAGCTTTTTGCTTGATTGATGCTTTCTATTTTGTTTTTCTTTCCCTAGCTCATCATATCATTCTTTCCTTAAACTTTTCCTTTACTTTCATAATTTTTTCTCTAAATTCTTAAATTGGAAACATATTAATAACATCATTATTTTTCTAATATAAGTATATAAAGCTGACATATTTTTCTGAGATCCACTTTAGCTGCAACCTGCAAGTTTTGATACTTACCACCAATCACTAGCCATAGTATTATGTATTTTCTAATTCCTAATTTAATTAATTAACTATATCTTTTACCTATGAGTTATTCAGAAGTGTAATGTTCTCTAAATTTTAAATGCTAATGGATTTTTTCTATTAGAATGAATTATGTCAAACTGCTAACATTCAGTCTTTTTATAAGCTATAAAATGGCACTTTCATATATTCTAACATAATAGTTTTCTTTTATTACTATATAACTTAATTTCATTTTGATCAGACAATGTTAGATTGTGGATTTTAAACCAAAGGTAACCACATTCACACAAAAAGTCTATTTCTACCATTTTGTGTTTTATTTGGGGGTTTTAAAATGTTATAAATATGTGTGTAATTAGTAATTTTCAAATAAAAGTCCTCCCTGAGTACTGGAATGCTTTCTG TCONS_00037249 TCONS_00037250 TCONS_00037246 TCONS_00037246 TCONS_00037246 s 5' 0 TCONS_00037249 TCONS_00037250 TCONS_00037246 TCONS_00037246 TCONS_00037246 s 5' 0 EMBV3_17522 AGTGGTGACAGTGCTGGCGGCAGCAGCGCTGGGGTGCAAGGACAGGCTCCGAAACAATAA Gene GeneID:100297007|LOC100297007:XM_002698091:115_cdna Constitutive 0 NULL GeneID:100297007 25 GENE LOC100297007 NULL hypothetical protein LOC100297007 EMBV3_36890 TGCCATTCGCACGAAGTTGGAGCAGGCCCTGGACCCCCGCCCAATGGAAGGAGAACCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00122 GCCCATGATGGCAGCAGTAGCTCACATCTACCCTTAGAGCTCAAGTAGGCAGTGTCTTCT Gene BVV0101_065039 + 0 NULL GK000026.2:20093248-20206337 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03269 CCCCATTACTGTCAAGAGAATTGGTGCTTAAGATCCCCATCACTGTGCTCCTGGGGACTC Gene GeneID:282195|COL9A1:XM_002690002:16_cdna UTR3_Alt 2 NULL GeneID:282195 9 GENE COL9A1 NULL collagen, type IX, alpha 1 EMBV3_25221 GTACAAGGAAACCATGAACATCATCGCCAAGAGCCACAACGTGCCGGAACTGGCCGGACT Gene GeneID:100300676|LOC100300676:XM_002683911:2_cdna Constitutive 0 NULL GeneID:100300676 Un GENE LOC100300676 NULL hypothetical protein LOC100300676 EMBV3_43228 CACTTCCCAGGAGATGAAGTGTATTCTTCACTGGTAGCTAAGGCAGTACCAGGAAAATTA Variant GeneID:100296216|LOC100296216:XM_002690507:487_cdna 138^186 1 EMBV3_43292 GeneID:100296216 10 GENE LOC100296216 NULL similar to chromosome 14 open reading frame 119 EMBV3_18161 TACTCATCGCCTAAGAGAAAACATACTCTAATCACCCCGCCTCCGGACAGGTCATAAATC Gene BVV0102_055516 + 0 NULL GK000013.2:78404574-78408937 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046428 TCONS_00046426 TCONS_00046429 TCONS_00046427 1 XLOC_026710 Coding TCONS_00046428 XLOC_026710 Coding Coding - 13:78406866-78411506 - TSS33682 2376 1 TCONS_00046428_3 471 2 0.488251778400517 0 0 0 3.97926933768432e-11 2.14721737076446e-07 0 0 2.642933038495e-07 3.58844424489669e-07 1.80498507060639e-07 1.02575627691915e-07 0 1.34431597058128e-11 0 2.0086954316463e-07 0.00204561232913396 7.1139388035946e-07 1.52358992658882e-08 3.27393547237114e-07 3.20141426383073e-07 1.43040084829308e-07 0.000302903053767516 0.000160535122421361 0.00124993722781578 1.54757288106972e-26 0 0 0 4.47694765810765e-17 3.70447334775848e-52 XR_232508.1 LOC101902488 PREDICTED: Bos taurus uncharacterized LOC101902488 (LOC101902488), 0.0 924 78.07 0.48526936026936 TCONS_00046428_3 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 9e-87 279 36.14 0.925690021231423 1 noncoding 0 0 0 0 -0.32705264000874 0.158215302671122 0.0151380831619133 0.821563915197345 CCTGCAATATGTGGACGACGTGTTGCTAGCCGCTGAGCCCTGGGTAGAATGCTGTGAAGGGACCCCAGGCTCCTCCACTTGCGGGCAGAGGCAGGATCCCGAGTGTCGAGGAAAGAGGCACAAATCTGCAAGGAGGAGTTGCAGGCATTGCCTCTTGGATCCATCACACCAGAGCGAAGAAGGCATACAACGCTGACCTGGAAGACGCCGAGTGGACCACCCAGAAGGACCCTACCGACCCAGGGGAAACCAAGATCATTCTGAAGAGGAAGAAGAAAAGGAGGTCCCGGACGAGCCCTCTATAGGATGGAGCTGGGTAAGCGACTCCTGCTACTTGGCTTCACCAACGCAATTCTGAACCTGACCACTGTCCCAGTACAGGGCAACATCTTCATCTCATGGGCACATTCTTACGCGAACTTCCACAACTCCTCCAATTGTTGGGTATGTGGGGCTATGCCCCTGTCAGTAATGGACGGACTCCCCTGGTGGGTATCGCCACTTCATGATGGAGACTTTCTACCACTGTGTTCTTTCTTGGAACAACAGAAAGGAACTTTCATTTCTCTCAGCAATCATGATCTTTCTTTGCTCCCCTGGTGTAAGAAAGAGCCATCAATGGGCCTGGGACATGGGGTTACATTTAGCATGAACGCTAGTCTTAAGGCACTAACAAGTGCTTATAACTCATATATGAGCAATGGACAGAAGAACAGCACCCCTACAAAAGAGGAACAGACCTTCCGGTACCATGAGGTATACTACCAGGTCTGGGATGAATATTTCTGGATGACTTCTGAGAGAGGACAGGTGATTACTCGTGCTACAATTTGCTGGGAACAAAAAGAACACAAAATTGGATTTGGAGACCACCCCCTAAACCCAAAAGATTTAAAATATATGGGTTATTTGTCCGCTGAACAATGTAAACAAATCTTGGACGTAACCTATCACCCCAGTCGGTCTGCTCAGTGGCCCGGTTCCGACTGGAAATATAGTCCCGGAATCCGCTGGGTAGCCCCCAACGGGACCAAGTGGCTCTGTGGGCCTAACTTATGGCCATGGTTACCAGTTGGCTGGGTAGGGCGTTGCACACTAGGGTTTGTTTTCGCCCCTGGCAGAATTAAGCCTAGCCTACACCATCCTCCAGCAAACCTGCCCTATCTGCATGCAAGATGGACACGATCCACGTTCCAGTGGTATGACTATCTTGCTGGCTTCTTTGTACCCTCTATAGGGACAGCGGATATCATGGTTAAGGTAGAGGCCTTAAATAATTTCACTAAACAGGCCCTCTTAGACAGTAAAAAAGCCATTGAAGCTTTGAACGAAGAACAATCTCAGATGAGGAAGGCAGTAATGCAAAATAGGATGGCATTAGACATACTCACAGCAGCCCAGGGGGGAACTTGTGCCATAATTAAAGTCGAATGTTGTGTATACATCCCTGACCTGTCTGGAAATGTATCTGCTGCCATGGAGGATATGCAAAAACAAGTGAAAGCCATGTCTGGTGAAAATATTCCTTTTTGGACTTCGATCCTGTCCTGGGTAAAGGGAGACTGGTGGAAAACTATTGTAAATGTTGTTATAGTATTCTTAATCATACTGGTTTGTGGGCCCTGCTTGTTACAATGCCTTGTGAATTTTGTAACCCAGAGGTTGGTAGCATTCTCTCATGCGGTTGCCCATAGGACTAACGTACAATCTACCTCTAAGTGAATGATGCTCGTTACGGAAACTAAGAGCATCAAGAGGGGGGAATGAAGAAGGAATTCACAGGGCCTGGACCCCATCTCAGGCCTGTTCGTGCTGATCGTGCCCGGCCACCTCTCCAGTGGACTCTGGACTCTGTGCTTAGTGCCTATGGAAACTACAACAGAAGGATAACATCCTCTGGACAGGGGAATCTTGAAGATCACATCCAGGTTACTCATCGCCTAAGAGAAAACATACTCTAATCACCCCGCCTCCGGACAGGTCATAAATCTTTTCTGTATCTATCGGAATGTAACCACAGGCTTATCGATTATTAACTGCTTGGAATGTAACCGCGAGCTTATTGATTATTAACTGTCTGAACACATAAGACATGAATGATGGGTTATTGTGATTGTATTTACCCTTCCTTTGTTTATGTAAGTCTCAAGGAATTTGGGGTGGTGGGTTTCGACATGTACACATGGGGTATAAAAGATTTTCACAAATGCTGGTCGGGGTCCTTGACTAAGAGGAGACCGTGCCTTGGGCCCGCTGGTGTAATAAACTGCACTCCACTATCTGCATTGTCGTTCTGAGTGAGTTAGTTTCCCGGAACGTGTGGCTACAACATTTGGTGCATTGGCCGGGAAACTCCTCACTTTGAGGAGACAGGTC TCONS_00046414 TCONS_00046415 TCONS_00046416 TCONS_00046417 s 5' 38115 TCONS_00046414 TCONS_00046415 TCONS_00046416 TCONS_00046417 s 5' 40352 EMBV3_00348 AGCAAAAATGGCCATGCAGGTCGACATCGTTGGTAATTTACAATAGCTTTTTTGTTTCCC Gene BVV0102_332525 + 0 NULL GK000001.2:85729625-85933306 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36218 AGGGGAGGACGAGGATGAGGGTGGAGAGCTGATGTCCGAGAAACGCCAGCATCCTGGAAA Gene GeneID:613414|TRH:NM_001101221:149_cdna Constitutive 0 NULL GeneID:613414 22 GENE TRH NULL thyrotropin-releasing hormone EMBV3_12235 TATCACAGTGCCAGGGAAAGGCTATGTGAGACGTGGTGCCTGTTGGCTTAACTGGGATGA Gene GeneID:517950|GPR115:NM_001143875:291_cdna Constitutive 0 NULL GeneID:517950 23 GENE GPR115 NULL G protein-coupled receptor 115 EMBV3_15904 TCGTGACATGACTCCTGGAAGTGACATAGGAGCGAGCAGCAGGTGGTTTATTTCCTGGGT Gene GeneID:781721|C16H1ORF21:NM_001081547:132_cdna UTR3_Alt 2 NULL GeneID:781721 16 GENE C16H1ORF21 MGC155149 chromosome 1 open reading frame 21 ortholog EMBV3_14328 TGAAGCCACACTGTTTTATTTATGTGAACTCGCTCCTGCACCTCTGGATAGTGACATGCC Gene GeneID:510557|HSF2:NM_001083405:8_cdna Constitutive 0 NULL GeneID:510557 9 GENE HSF2 MGC137957 heat shock transcription factor 2 EMBV3_01599 TTCCTGGAGTATTATGACTTCTATGAGGTGGCCTGCAAAGATCGCCTGCACCTTCAAGGC Gene GeneID:100138178|UBE2Z:XM_002695907:252_cdna UTR3_Alt 4 NULL GeneID:100138178 19 GENE UBE2Z NULL ubiquitin-conjugating enzyme E2Z EMBV3_19072 CAAATGCCTGAACATCTGCTCCCTGGTCCTGGGCATCCTTCTGACTGTCGTCCTCATCGT Gene GeneID:282255|IFITM3:NM_181867:2_cdna Constitutive 0 NULL GeneID:282255 11 GENE IFITM3 NULL interferon induced transmembrane protein 3 (1-8U) EMBV3_35788 TACTTCAAGCAGTGGATTAACCTGAAAAAGATGACTGCAAGAACATTGCCAACATCATGA Variant GeneID:540516|ERI3:NM_001046479:275_cdna 432^531 5 EMBV3_15135 GeneID:540516 3 GENE ERI3 MGC134375 PRNPIP ERI1 exoribonuclease family member 3 EMBV3_06587 AAACCATCCACCACTACACCTGTGAGCTGCCTGCCCTTTTCCCCCTGTCTTGTTCTGATA Gene GeneID:509508|LOC509508:XM_002687310:102_cdna Constitutive 0 NULL GeneID:509508 5 GENE LOC509508 NULL similar to olfactory receptor Olr1107 EMBV3_05769 AACTGGACTTGGAGGAAATCTTTCAGAAGAGCAAGCCCCGCTACCATAAGCGCACCAGCT Gene GeneID:507693|INCENP:XM_002707799:319_cdna Constitutive 0 NULL GeneID:507693 29 GENE INCENP NULL inner centromere protein antigens 135/155kDa EMBV3_19041 GTGGGTTCTGAAGTTCCTCCCTCATCTGCAGTCCCAGATCAACAAATTCTGGAAGAAGCC Gene GeneID:281612|AKAP5:NM_174236:17_cdna Constitutive 0 NULL GeneID:281612 10 GENE AKAP5 AKAP AKAP75 P75 A kinase (PRKA) anchor protein 5 EMBV3_15049 GATGAGGGACCAGGCCCTCAGATACCGCAGCATCAGGGAGCAGGAGGCGCTCCTGGGTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13280 ACTGAGTTTTGCTTCAGGGCCTTCTCTGCCTGTCTGATTGCCCCTGTTTCACTGTCTTCT Gene BVT0101_003627 + 0 NULL GK000015.2:25182374-25255386 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11775 TGAAGACGGAGGAAAAGTCCAGTGATGCTTCTCCATGCTACGGCTTGCCGACAACCAACA Gene BVT0102_056248 + 0 NULL GK000019.2:52297890-52308518 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01508 GACCACTTCCACACCCGCTACACTAGAGAGGTTTATGAAATGGGTGATATGAGATGGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36648 GCAGCCGTCAACACCATCCAGTCCCATCTCTCCTCATCTTTTAAGTCTGAAACTCTACAG Gene GeneID:531926|RCCD1:XM_002696580:7_cdna Constitutive 0 NULL GeneID:531926 21 GENE RCCD1 NULL RCC1 domain containing 1 EMBV3_35865 GTTAACTCACACAGAAGGCTACCAGGGTCACATAAAGTACACAGAACTGTACACCCACAC Gene GeneID:536956|YARS2:NM_001098088:11_cdna UTR3_Alt 2 NULL GeneID:536956 5 GENE YARS2 NULL tyrosyl-tRNA synthetase 2, mitochondrial EMBV3_24965 AAGTCTACAATGTGAAAATCCGCTTCTTGGAGAGGAATCAGCAGTTTGCCCTGGGGACGG Gene GeneID:100298588|LOC100298588:XM_002688459:7_cdna Constitutive 0 NULL GeneID:100298588 6 GENE LOC100298588 NULL similar to lymphocyte cytosolic protein 2 EMBV3_21433 AGCAGATTTTCATTCTGAATTTTAAGTGGCAATTTTGAGTCTCAGCTGCCAGTGCCAACC Gene GeneID:506562|BZW1:XM_002685506:29_cdna UTR3_Alt 2 NULL GeneID:506562 2 GENE BZW1 BZAP45 KIAA0005 basic leucine zipper and W2 domains 1 EMBV3_12063 ACACTAAGTTTCCTAACATAAGACCCATGCCAAGAATCTGCAACACTGATGCCTGCAAAG Gene BVT0101_041730 + 0 NULL GK000003.2:38167490-38698740 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173085 TCONS_00173086 TCONS_00173087 1 XLOC_104288 NonCoding TCONS_00173087 XLOC_104288 NonCoding NonCoding - 3:38693878-38756278 - TSS128761 1100 1 TCONS_00173087_1 105 0.09 4 0.982435615955384 0.000177048465384242 7.9697453028178e-17 0.000221839588100724 2.2062797149683e-08 0.000273235438863323 0.000309293845592436 0.000282480123908322 8.47639676337954e-05 2.31340962847924e-08 0.000213201636827546 1.12374981356295e-25 0 3.49994983101434e-30 0 0.000104835914466904 0 0 0 6.82786592485459e-45 2.77066803266223e-05 5.06691882112551e-37 0 3.65927002205858e-26 2.30138223371983e-31 5.38800177641235e-16 1.29217626792963e-70 6.50842508298231e-08 0 0 0 XM_003583919.2 LOC788801 PREDICTED: Bos taurus ferritin-1, chloroplastic-like (LOC788801), 1e-43 181 71.32 0.35 NM_000146.3 FTL Homo sapiens ferritin, light polypeptide (FTL), mRNA. 8e-47 192 72.22 0.340909090909091 0 noncoding 0 0 0 0 GAGAGGCTGCAGGCTCAGAAGCTCAGAAGCCCAGAATCCCTGACGCCAGGGAAACGCAGAAACAGACAACCCGCAAAGGCCGCTGGGCTCCAGAGAGGCACCTGGTCGCTTAAAGACGAGCCTTTATAATAGGTGCTCGTCCTGCCCAGCCTGGGGCTAACAGCCTACAGAAGTTACTCAGTTGGCCGCCCATCTTCTAGATGAGTTTCACTTGCTCACCTAGAAAGTCGCTCTCCCGGAAGTCACTGAGATGGAGGTCAGTGCGGGCAAGACGCAAGGTGCACAGATCCAAAAGGGCCTGTTCGGCTTTTATCCAGGGCCTTGGCGGCTTCCCTGGCGGTTTTAACAACCCCACTCATCTTGGGACGGCTTCTGTACTTTCTGGAAGGTGGCGTGGCTACTTCACTGGTTTTCAAGAAATCCTGGCACCCTCAGGCTTCTGCTCAGCCAGTTCGCCAAGTGGCGGTGGAACCAGAAGCCCAGCGAAGGTATACACTGGACCAGAGATTGGGATGTAGAATTTCTCATCAGCACATGATGAAGCACAACTGCACATGATGAAGCACAACTGCAAAGTACCCACTTCCCGAATTTTTATGGAGAAGATGTCAGATAAGGTGCTTGGATCTCTCTGTTAAACATAGAGATGTTCTGGATCATTCAAATGGGTTTTTGCTCTTCATACTTTTAGACGTCAGCAACAATATTCATGGTCCTCTGGGGAATGCTGCATAATATTTCCATCTATTGATATTCAATATCCTTAATTTTTTGCATTTTCTGTTAAAAATGGTAATTTTTGTTTGAAAGCTCATGAGCTCGAAGATTTTTGTTTGAAAGTTCATGTTATGTGAGATTATTTTTCTTCATTATATTTCATCTTCTTGCATGATATTTCATTTGACTCTTTGCAGGCATCAGTGTTGCAGATTCTTGGCATGGGTCTTATGTTAGGAAACTTAGTGTTTTGTACTACATGAGGAACAGTCTACCCACCAAGATTAACTTATCTGTGAGGTATAGGTGGCATAGTGCCCAGATTCTACAGTATTGTTGGGGCCTAGGGAAATGGTTTCATTTTAATATCTTTTAAAATAAAA TCONS_00173091 s 3' 571558 TCONS_00173091 s 3' 509591 EMBV3_14137 GTGGAAGACGTCAGTAGAGTGTAAAAAGCTGGATAATCAGGGAATGGGACATAGACCAGG Gene GeneID:541201|N4BP2L2:XM_002691756:288_cdna Constitutive 0 NULL GeneID:541201 12 GENE N4BP2L2 NULL NEDD4 binding protein 2-like 2 EMBV3_29122 GATGGACGGTAGAAGCTACTCTAACATGCCAGACCAACTGCCTGTCTTCACTGATTCCTC Gene GeneID:786757|ASCL3:XM_002693061:365_cdna Constitutive 0 NULL GeneID:786757 15 GENE ASCL3 NULL achaete-scute complex homolog 3 (Drosophila) EMBV3_39954 CTACCCAGTCAGATTAGGAGGGTTTCCGCTGGGTTAAAGTATTTCTGAGCTAGCCTCCCC Gene GeneID:618766|LOC618766:NM_001110184:140_cdna Constitutive 0 NULL GeneID:618766 14 GENE LOC618766 MGC148499 UPF0598 protein EMBV3_04105 GTGTGGCAAAGCGTTTAGTTGTACTGGAAACCTTGCTGTTCATCGGAGACTTCATACTGG Gene GeneID:100140695|ZNF107:XM_002695312:26_cdna Constitutive 0 NULL GeneID:100140695 18 GENE ZNF107 ZNF91 zinc finger protein 107 EMBV3_02969 CCGACGCGGAGGTTTCCGCGGCTTCTGCGGCAGGCGGGGACTGGCCGCTACCAGGTGCTT Variant GeneID:512310|NDFIP2:XM_002691904:18_cdna 171^340 3 EMBV3_35487 GeneID:512310 12 GENE NDFIP2 NULL Nedd4 family interacting protein 2 EMBV3_30899 TGATCAGCATCCGGGGAGTGGACTCTGGCCTGTATTTAGGAATGAACGAGAGAGGAGAAC Gene GeneID:540758|FGF16:XM_002699985:72_cdna Constitutive 0 NULL GeneID:540758 X GENE FGF16 NULL fibroblast growth factor 16 EMBV3_13010 AAAGCACATTTTGGGGATCATAGACGGCTGGGATTTCAGAAGGGCATTTGTGCGATGGCC Gene BVT0102_019589 + 0 NULL GK000005.2:108724918-108731325 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14003 GCCTTATGTAAAGCACTTGAACATCCTCAGCAAGGTCGCCGTCATCTGGTTAATACTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29857 GTACAGGACGATGTATTTGGAGATGGATTGTTTTACAATGCCGGGCTGGGCACAGTTCCC Gene BVV0101_070607 - 1 EMBV3_33943 GK000020.2:15214006-15558580 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15814 GAAGAAGTTGTAGAGATAGATGGAAAACAGGAGAAAGCGTTAGTTCATTGCAGACCACCA Variant GeneID:506714|MGC133692:NM_001038509:2_cdna 434^590 2 EMBV3_24410 GeneID:506714 9 GENE MGC133692 NULL hypothetical LOC506714 EMBV3_37244 AAGGCAAAATTCAAAGGAAAAGGTCATGAGACCTGTTTAAAACGAATTCGACTTGATCTC Variant GeneID:506176|TIPIN:NM_001105336:71_cdna 446^568 1 EMBV3_31295 GeneID:506176 10 GENE TIPIN MGC127806 TIMELESS interacting protein EMBV3_24320 TCTGTTTCTCAGCTTCAACAATATATCTACGAAGAAGAAAGGCGTATGGCATCTGTTGTA Variant GeneID:511727|LRRC49:NM_001100343:137_cdna 808^955 1 EMBV3_01582 GeneID:511727 10 GENE LRRC49 NULL leucine rich repeat containing 49 EMBV3_32482 AAGAAGAAAGACAGTGGAAGGAGGCACCACCCCATAGGCTTACTACCTCAAATACTGGGC Gene BVT0102_110063 + 0 NULL GK000023.2:30980073-30994409 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133134 TCONS_00133135 1 XLOC_081026 Coding TCONS_00133134 XLOC_081026 Coding Coding ZNF184 23:30960004-30983689 = TSS99495 6452 1 TCONS_00133134_6 752 0.135461872287663 6 0.727833136294545 0.000663178847920206 0.000796478273338185 0.000380792632067866 8.65276916267705e-05 0.000540800589929635 0.000174268449766903 0.000196873632431491 0.00101036337310203 0.000882032617171469 0.000108648074657733 1.17861352118921e-05 0.000198095893982418 9.88774789892554e-05 0.000192968671908257 7.3760168828759e-05 0.000179880066953367 0.000167334558786601 0.00012119725545154 0.000670988941997594 0.000493621087430355 6.05808735903813e-06 0.000126684216026723 0.000256848561641252 0.000209202352858476 0.000593472760401299 0.000379849558870824 0.0006108585502661 3.38567127231851e-05 2.60137011064765e-08 0.000354365927376209 XM_005223723.1 LOC515674 PREDICTED: Bos taurus zinc finger protein 184-like (LOC515674), 0.0 7874 99.91 0.678084314941104 NM_007149.2 ZNF184 Homo sapiens zinc finger protein 184 (ZNF184), mRNA. 0.0 3694 88.26 0.448388096714197 TCONS_00133134_6 sp|A6QLU5|ZN184_BOVIN ZN184_BOVIN Zinc finger protein 184; 0.0 1553 100.00 0.998670212765957 7 coding 0 0 0 0 -0.116633687626087 0.341372386085656 0.00704078165109878 0.899548709802076 GAAACCGGCTGTAGGCATGAAAAGAGGTTGGCCGAGGGCAACCAACTTCAGCGTGTATAAGGGTTCAGACTCCTGCTGGACATCTGGGCTCCAGAAAGAGGACCCAGATACGCTGCTTGGGAAACCCTGGTGTCCAGATTCCAAGAGGAACGAGATGTGCGCCTGAGATGGAAGATCTGTCTGCTCCAGAGTCTGCCCTTTTCCAAGGGGGGCATACTTTACTCCCATCAGCTAGTTTTCAGGAATCAGTGACCTTCAAGGATGTGATAGTGGACTTTACCCAGGAAGAATGGAAACAGCTGGATCCCGTACAGAGAGGTTTATTCAGGGATGTGACATTGGAGAATTATACACATCTGGTCTCTATAGGACTCCAAGTTTCCAAACCTGATGTGATTTCCCAGTTAGAGCAAGGGACAGAGCCGTGGATTGTGGAGCCCAGCATCCCAGTAGGGACCCCTGGAGACTGGGTGACAAGACCAGAAAATAGCATAACAGCCTCAGAGCTGGACATTTCTGGAGAAGAGCCGTCTCCAGGGGCAGTAGCAGAAAAGCACAAAAGGGATGATCCTTGGAGCACCAACTTCTTAGAAACTTGTGAATCCAAAGGCAGTCCAGAGAGGCAGCAGGCAAACAAACAGACACTGCCAAGGGAAATAAAAATAACTGAAAAGACCATACCAACTTTGGAGCAAGCACATGTAAATAATGACTTTGAAAAAAGCATCAGTGTGAGTTTAGACCTTTTAACACACAAACAAATATCTCCAAAACAGACCTCTACTAAAACAAATGTCAAACAGAATTTAAACCCAGTTAAAAAAGAGAAGTCTTGTAAGTGCAATGAATGTGGAAAAGCTTTTACTTATTGTTCAGCTCTTATTCGCCATCAGAGAACGCATACTGGAGAAAAACCCTACAAATGTAATGAATGTGAAAAAGCCTTCAGCCGGAGTGAAAACCTTATAAACCATCAAAGAATTCATACTGGAGATAAACCATATAAATGTGATCAGTGCGGGAAAGGCTTCATTGAGGGTCCATCTCTTACTCAACATCAAAGAATTCACACTGGAGAAAAACCCTATAAGTGTGATGAATGTGGGAAAGCTTTTAGTCAGAGAACCCACCTTGTTCAGCATCAGAGAATACACACTGGTGAGAAACCATATACTTGTAATGAGTGTGGAAAAGCCTTTAGCCAGAGAGGCCACTTCATGGAACATCAGAAAATCCATACAGGAGAAAAACCTTTTAAATGCGACGAATGTGATAAAACATTTACCAGGAGCACACACCTTACTCAACATCAAAAAATCCATACTGGAGAGAAAACCTATAAATGTAATGAATGTGGAAAGGCTTTCAATGGACCCTCAACGTTTATTCGTCATCATATGATTCATACTGGGGAAAAACCATATGAGTGCAATGAATGTGGTAAAGCCTTCAGTCAGCACTCAAACCTCACTCAGCATCAGAAAACACATACTGGGGAGAAACCTTATGATTGTGCTGAGTGTGGGAAATCCTTTAGTTATTGGTCATCCCTTGCTCAACATCTCAAAATTCATACTGGAGAAAAACCTTACAAATGCAATGAATGTGGAAAGGCCTTCAGTTACTGCTCATCCCTTACTCAACATCGGAGAATTCACACCAGAGAAAAGCCTTTTGAATGCAGTGAATGTGGAAAGGCTTTCAGTTATCTCTCAAACCTTAATCAACATCAGAAAACTCATACCCAAGAGAAAGCTTATGAATGTAAGGAATGTGGGAAGGCCTTTATTCGAAGTTCATCTCTTGCTAAACATGAAAGGATTCATACTGGTGAGAAACCCTATCAGTGTCATGAATGTGGGAAAACCTTCAGTTACGGCTCATCCCTTATTCAGCATAGGAAAATACATACTGGAGAAAGACCTTACAAGTGTAATGAATGTGGGCGAGCCTTCAACCAGAACATACACCTTACACAGCATAAGAGAATTCACACGGGAGCAAAGCCTTATGAGTGTGCCGAGTGTGGCAAAGCCTTTCGACATTGTTCATCTCTTGCTCAACATCAAAAAACACACACAGAAGAAAAACCCTACCATTGTAATAAGTGTGAAAAGGCCTTTAGCCAGAGCTCCCATCTGGCACAGCATCAACGAATTCACACTGGAGAGAAGCCCTATAAGTGCAATGAATGTGACAAAACCTTTAGCCGGAGCACTCATCTGACTGAACATCAGAATACTCATACTGGAGAGAAACCTTACAACTGTAATGAATGCAGGAAGACTTTCAGCCAGAGCACTTACCTCATTCAGCATCAGAGGATTCATTCAGCAGAGAAGCCTTTTGGATGTAATGATTGTGGAAAAGCCTTCAGATACCGTTCTGCTCTCAACAAACATCAGAGACTGCACCCTGGCATATGACTCTTCTAGGATCATCCTAAACATAGGGGATGCATTTATTCGGGGATACATTTACTCTGGTTTGTCCTTTTGTTCAACACAGAAGAATCAGGCTGGATTGAGAAACTGCTGAAAATACTTCTACTTTTCACTGTTGTGCTGTGGAATAGAAAGTGCATTGGGCTGAAATAATCCGATTATGTTGTTAAGCAATTTTGTGACATTGGCAAATTCAGCCATTTTAAGCTTCAGTTTCCTCTGTGAACTGAGGGATTTGGAGTAGGTCATTTCAAAGGTCATTTATTCAGTTTTGTATGTTTACAATATATTCTTGAATAGGATTATTATACATCAGCATTTTGCTTTGTTGCTTCTAGAGTATATGTATTTATGCATGTTTTGCTAATAGAAAGCATTTATGTTTCAGCAAGTAGACTGGAGGTCGGTTATGCTCCTGTTCTAACACATTCAAGTTCTTTAAGTAACTGATTCCTAATAAAAAGAATTGTAAAATACCCTCAAATTAACAATTCAGGAGCATATAATGGCTCACTTAAGTCAGTACAAGTATTAAACCTTCCTATTATTTTCTCTTCTAGTATGTTTTAACATTCTAGAAGTTTATCACAACTACATAGACCCACTACTACAGCTTACACCTGTGCTATTTAACCCTAGTTACATAGTGAAATCACTTCAGTAACTTTATAAAATTCTGTTGGCCAAGACTCCACCCCCAGTGACTAATTGGCTCAGGGAGTAGGGTCCAGGCTTGAGTATCTTTTTTAAACTCCTATATGTACCCTGGAAAGAAAAACTGGATTCAGTACTCACTCCCTTAGTACCTTCTTGTAGCTACTCCTAGAAGCTCACAGGTAGCTATTGCATACACATAATGTAATTTTGACTGTTAGTTTGTTTTGTAAATTGATTTCTCAAACTCTGAGAGGTAAGGTCAATTTGTTTCCTTACCAAAGTGCAGAAATTAAATGGCTGTATAAAATAATAGTCATTTTATTTGCTTTTCCTTGGCCACCTGATATCATAAGCAGATGACAGTGAGTGACACCCCTGAAGATGGGTGGCCCATAGGCTGCATGGCCATTTGTGACAACCCTGGTCAAAATAACATTTGAGCCTGAAATAAATGTGAATTTAGCCATAAAGAGATTGGCCCTCATATTTTCTCCAGATACAGTCTGATTAAGTAGTCACCTCTTTTAGGAGCAATTGACAATTTCCTAGCCTGTCCTTGAGAATGGGGAGCTCTAAGAACAAAATGTAGCACTGAAATTGATCATTGTTTATATAAAGGGGTTCCAGACTCTTCCCACAAAGGAAGTTTGGGGGAGTGAGTGCTATAGCTCACTTCAAGTGAAAAAAATCCAGTTATTTTTGCTTATATAATGCCAGTGACCTGCATCAGATTTTTGTCACCTCCTTAAATGAAGATACCAGGCAGTGAAGAACAGAATTCAGGAAATAAAGTAGCCATTTAAATCTCGGGACTTTTTTCTGTTGTTGTTTTGAAACATCCTTGAAGAAATGTCATCTTGGTATTTCTTCATTTCTCAAGGCTTCCCTTATATAGGAGTTTTTTTTAATCCCACAGCAGAGAGGTAGATGCTGGCAGAGAGGAATGGATCTCAGGTTATAGGATACACTTTGGTTGGAACCTGAGCCACTCCCACAGCATGAGGAGATGAAGTTTCTATATCCAGGTGAAGGGTCCTCCTGTTTTAAAGGAGATCCCAAAATAGAAAATACCAGAGTTTGTCTGAAATGAACAAGAAGACTCTGTTCTTTTGCCACACTGATTCCCATATGAGGGAACAGAATTTATTTGGGAATTTCTCACTAACCTTGGAAGACCTTACTTTGTTCCATTAATTTGATCTCTTCATAGATAATGGTCAGGTCAAACTCAGAGCATTGGGAATGTGTGATCACTGCCTAACTTAATTCTTTTATTAAAAACAAATCTGATCTTTCATGCCTTTATATTCTCAGACTGGATGTGTGCTAACCACTCCCAGACAATACAGGCCTAGAGAAGGGATAGGCAGTGTGGTTCTAGAACTTAACACGATCTCACAACTCTCTACTAGCTATCCCAGTTTTCTCAAAGTGGGTGAATTTGCAATTACTGCTGTTTCTCAGAGATACCAATCTACTTATACACTGTGGTAAACTAAGGTTTGGTCCTTTGTCACCTGATCTGTCCCTTAGCCATGTACTTAACCTTCCCTCCTTACTCCTATTTTAAGAGCAGAGTGAGTAATTTTAAGTTTCAAACTTTTTTCTTAATTTTGTCATTTATATGCCATAAACACCAACTATAACACTAACATTACTTCCTTAACATCATACGCAAAAGAGTAGAGCAAAATTAAAATCTAAAGGGGAGATTTTGAAGTTAGAAGTCATAATTTCTTCCTTGAAGTTATAATTAGTCCAGAAAAGGAGAAGAGGGATTCAGCTTATCTTAGAGGCTTCACAGCCACTGAAGCTGCTCAAAAATAAAAGGATCTCAGAAATAACTAAAAAAGCCAGTAGTTCTTTATGAAGCAAAAGATTCCCTATTATTTACCCAAAAAATCTAATACTAATTTTCATATGTATCTTTGGATGTCTCAGTGTCCTAGGTTGAGCCTTTAGAGACTAGATGCAATGAGCTTCAGTATACAAATGGAAAGGTTGACCTTGAAACAGTATAAATGGTATGACTGTTAAAACAGGAGAGAACATAACTAAATCTTCTAGTGGATTTGATAATTTGGGAACATTTTGAATCAAGAATACACAGTAACCACAGAACCTGGGCCTCCTAATTTTACAGTAAAGAGGAAGAAGAAAGACAGTGGAAGGAGGCACCACCCCATAGGCTTACTACCTCAAATACTGGGCACTAAGTATTTATAATTGATTAACTGGTTGAAGGTTAAGAAGGGGAAGTACATTAAAAGGATGGGGGCAGGGAGAGGTCAATACTTCAACATGATCATAATCATGGCCCAAGTCCCTAGGTAAATTATAGCATCCAGGCTGGAGAGAAGGAAATGAAACTAGGAAGGGACAGAGAAAATGGAGGGACACAGGGCCTGTGAATACTGTGATACGAGCTCAGGGGGGCTTAAAGAGCTATGTTAAAAAGTCGAGATGCCTCCCTGTTTGCCTTTCGGGAGTAATAGAGATTGCTGAAGAAAGAGCACTTTGAAAATTTTTACTTGATCTCTCTACAGTTCAAGCAGCTAGGAAAGATGATTGTACAACATGAGACAGCATGTGGTACTCAAAATCATCCTTGACCTGAGCTGTTGGCACTCTGCTTTTGATACCTGGAACATATCCACCTTCATTTCCCTTAGGATGAATTATTTTCCATAAGTTTCTTGACTCTTCATGCAAAACACCACCTGTAATTGAGTCTGTTTATATTTTAATGACTGACTGCTGACATTTCAAGCCCTGTCCTTTCCCCTTGTGCTTCCTATCTGGGCAAGCTAAATAAGCAAGCCTGGGTGCTTCCTCCCTTGGTGTTTGGGTAGAGGGTGTTCAAACCACACAATCCCTGGCTCACATGCATGAACCCCAATCCCAGTCCAACCCCATCCACCATAAACCTGATATGGAACTCCCTCCCTGCTCTCTCTTGGGCTGTTATCAGGCCAGTTTGGGAGCCTGCTGTGCTCTCCCCAGAAAGGTTTTATTTATGGACAATAAAGCGCTTCATACGCTATTGGGGCATGTGGGGAGTCATCAGACTTGACATCTGAACCAAATTTTCAGTGGGGATGATCCACCTGCCTATGTGGGGGTGACCATAGCACCTCCACCCCAGACAGTCTTTGCATGAACTAAAGCTCAGGTTTCAACACATAAAGGTGTTAGGAATCAAATTATTTCCCTGAAGAAATTCTGGTTCAACTACAAAAACACCCTGCAAAATTAAAATCATTGTATAGGTGGGACTTCTCTGGCTGTCCAGTGTTTAAAGACGGCACTTCCAATGCAGGGGTGTGGGTTCTATCCCTGGTTGGTCTGCAT EMBV3_29993 TACGTGCTGAAGCTGGGGCCAGGTGGCTGTTGGAAGAAGCTTTCAGTTCCTTTTTCCTGT Gene BVV0102_378918 - 1 EMBV3_06785 GK000027.2:15604016-15622995 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155088 TCONS_00156016 2 XLOC_094639 XLOC_094903 Coding TCONS_00155088 XLOC_094639 NonCoding NonCoding LOC790088 27:15611099-15623137 x TSS116118 555 2 TCONS_00155088_2 64 0.65045045045045 2 0.954058320179447 0.0202287671007135 0.019000044353505 0.0201991203825551 0.0105565730801454 0.0106380225837802 0.00358594088632627 0.00457763510533955 0.00779286171781929 0.00542345360186137 0.00181979299084172 0.000219312451301361 6.47755666669137e-06 6.02346590773869e-05 0.00105424088741732 0.000618837458302692 1.46635752989614e-09 0 5.57394309480274e-40 0.00791117011800466 0.0162917150504124 0.00810890834238889 0 0 0 0.0183129834787436 0.0158419922509188 0.0186436863127104 1.29478790949145e-09 7.65237107268452e-11 0.000197927451204939 XR_240357.1 LOC101905501 PREDICTED: Bos taurus uncharacterized LOC101905501 (LOC101905501), 5e-147 524 100.00 0.520720720720721 XM_005263638.1 IL36RN PREDICTED: Homo sapiens interleukin 36 receptor antagonist (IL36RN), transcript variant X1, mRNA. 3e-11 73.4 77.27 0.192792792792793 0 noncoding 0 0 1 1 -0.167087719320269 0.337458513186714 -0.0250588539045679 0.810979024070926 CAGGTTTATCAGCTGTGTGAGTTTGACACGTTCCCGAGTGTCTTAAAGAGCAACATGATTGGCTGAAGTCTAAGATGGGCTGGATGATCTCCAGCTTCTCACAGTCACTCCTGTGTGTGATCTCCTCCCATATCTTGCCAACCAGGGTCTGTGTAACAGTAGGATAAGCCAGAAGTGATGGTGTGTCACTTCAGAGATCAGGTTATAAAAGACAATGCTCTCCCTTCCTTCCCTCCCCTGCCCCCTCCGTCTCTCTCTTCCAAAGTATTTACTCTGGAGCAAGTCGAAAGGCCACAGGAAAAAGGAACTGAAAGCTTCTTCCAACAGCCACCTGGCCCCAGCTTCAGCACGTATCTGATTGCGGCCTCATGAGGGACCCTGAGCCAGATTACTCAGCCAAGCTGCTCCCAGATTACTGACCTCAGAAACTCCACAAGGTTTACATACAATACAAACACTTTATTAACAGCAGATCATCCTGGTGGGCCAAGGCGTCAACCCAGACATCCAGCACCCAGTCACAAGTTCAGCGCAGCCTCCGAGCCTCTCGCTCTG TCONS_00156017 r 5' 0 TCONS_00156011 r 5' 2978 EMBV3_03356 GAAACCAAGAGTCTTCTCTGGAAGCTGAAGGAGATGCTCCAAGCAGCTCTGACGAGGCTG Variant GeneID:539820|TRIM6-TRIM34:NM_001046461:353_cdna 110^586 1 EMBV3_18632 GeneID:539820 15 GENE TRIM6-TRIM34 MGC137351 TRIM6-TRIM34 readthrough EMBV3_15486 GGCTTATGATGGGACCACCTGACATTCAAAACATTCTTCGGGACACCTTCACTTCCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34851 AATATTTAGAGTGTCTGCTGCATGTTTGGCACAGAACACAGGCCCTCCCATCTTTGAAAG Gene GeneID:767862|FLJ13868:NM_001076973:416_cdna Constitutive 0 NULL GeneID:767862 25 GENE FLJ13868 NULL hypothetical protein FLJ13868 EMBV3_01261 TGCAAGCCTTTTCGCTTGGACTGGAGCACAGGCTATGTATCAAGGATTCTGGAGTGAAGC Gene GeneID:516084|MRPS30:NM_001079595:8_cdna Constitutive 0 NULL GeneID:516084 20 GENE MRPS30 NULL mitochondrial ribosomal protein S30 EMBV3_21695 GAACCAGACCAGGAACTGCTGGCAGAACTACCTGGGTGTCAACTTGGGACAATCGCCAGG Variant GeneID:614114|LOC614114:XM_002697101:222_cdna 159^259 1 EMBV3_28847 GeneID:614114 22 GENE LOC614114 NULL similar to cytochrome c oxidase subunit VIb EMBV3_06499 AATACTGTGTTCATAACACATAATGCCTATGCCGTTAAAAGTAATCTATGCTTATTGCTC Gene GeneID:280887|OTC:NM_177487:4_cdna Constitutive 2 NULL GeneID:280887 X GENE OTC NULL ornithine carbamoyltransferase EMBV3_42396 CTCTAACCCACTGCTTTACTCCCAGGCCATGTCCCCAAATTTATGTGTCAGTCTTGCTGC Gene GeneID:100301259|LOC100301259:XM_002693700:374_cdna Constitutive 0 NULL GeneID:100301259 15 GENE LOC100301259 NULL similar to olfactory receptor 480 EMBV3_05127 TAAGCCCTGCAGACACATTGCTAAGGGGAATATGGCAGGAACATTAGAGGAAGAGGTGGG Gene BVV0102_150245 + 0 NULL GK000013.2:18475032-18496783 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044656 TCONS_00042120 TCONS_00044657 TCONS_00044658 2 XLOC_026244 XLOC_025606 Coding TCONS_00044658 XLOC_026244 NonCoding NonCoding - 13:18474835-18482317 - TSS32782 2069 2 TCONS_00044658_5 79 0.353310778153697 3 0.723833712070579 0.0015672319654894 0.000403953152086711 0.000624336266402999 0.000274800344501231 0.000554912580858657 0.000140352797181645 3.13108410486513e-08 0.000317318713766105 2.16803573946969e-34 0 0 0 1.25471913398874e-09 2.26284053436683e-09 4.23499264605854e-12 8.46445345646504e-09 0 8.71420885198836e-09 0.00101862702423991 0.000622160415899378 0.00024972479261699 0 0 7.28138565651375e-09 0.000319195436452792 0.000491809228816925 0.000122917720497728 0 0 0 XM_005214275.1 CCNY PREDICTED: Bos taurus cyclin Y (CCNY), transcript variant X2, mRNA. 1e-47 196 99.10 0.0531657805703238 NM_181698.3 CCNY Homo sapiens cyclin Y (CCNY), transcript variant 2, mRNA. 7e-07 60.8 72.81 0.0546157564040599 0 noncoding 1 1 1 1 -0.149508109946371 0.43404207342437 -0.013239686090204 0.859052816764385 CTGACCAGAGGCTGGTGGCAGGGGGCAGCTGAGGGTGGATAACCTAGAACCAGGGATCTTACGTGATTGGTTGGGGGTCAGATTTGACTCCCTCTGGCTGGCTTTAAGTTGGAAGCAGGGGCAAAATTAGGAAGGTGTGTCCGTTATTCATCAAGCCCTAGCCATCTGAGGCCAATTGTTACAGAAGTTACTATTTAGCTTCCTGGCTTGTTGCTAGAGACAGCAATCTTGCTTCCTCTAAGTTTGATTTCAAGGAGGCTGGCTTCTTGGGCTGGTTACTATGGATAAGCGGTTGGTCTCTGGGGGTCACGGTGAGGAAACTGGGCGGTGAGCCCGACGTCTCTTCAGTCACATCATGTCAGGAGCTGAACTGGGACTGGAACTCCCTGCCCTGGAGCTTTCTGCCACCAGGCCTGCGGACCCAAAGTCATATTCTGAATAAGCCCTGCAGACACATTGCTAAGGGGAATATGGCAGGAACATTAGAGGAAGAGGTGGGATGGGGGCGGGTAGTGCACAAAAGTCGCTGTAGACCAGCAGCCATCCATCACTGGGCAACAGCCTGTGGCTGCCTTGCCCCCTGGTCATGTCTGCGCCCTCCCCCAGATGGTGTTCTCAGTTGACAATGCCATTCTCTTCTGCCAATGACCCTTCAGCACGGAAAGCTTGCAGAAGTCATGCTGTCTCCTATGTGCCATTCTGTGTCTCCTTGTAAGCCCTTCAGCCCACATCACTAATATAAATCTGTTAACTGTTATGATTAAATAAAAAGTTCATGTGTCTGCGTGGACATGCCGCACACATAGGGTCGAATGACTGCATGCTTCCTTTCACACAGCACCCACATCACAAAACAGCAACTGGAACAGATCACACAGTAACCATGCACCGCAGCCCTGAAAATCTGAATATTCACTGACTTGCAGTTACATTCCAGTCAAACTTGCCTGGGAAGCAAAAGGGTCGGAACTGCCTTAATAAAGAGAAGTCATTTCATCCTGTTGCTACCTCCACACCTCTATGTGACTGCAGTTCTTTAGAACTTTCCTTCCTCATCTTGGCATTAGCACTTTGCTGTCACTCATTTTCCCAGTACTACTGACCTGGGCCCTTGAACTCTTTCATCAACAGACATTGACATGAGACCAGATGAGAATTTCTGACAAGGTTTTTTGGCAGCTCACACTGCAGCACAAGGGAAGAAAGGCAAGGATCAGGTGTCCTTGCCTATCTGCTCCTTCACAAAGAGCTCCCTGGGTCTTTACATGGGGTGACGGTGAGAATGGATCTGCAGTCCAGGCAGGGGGCATGGCTCAGATGGTCTGTCCCTCCTCCTTGGCAGTGCCATATGAATAAATTGTGCAGTTTTTTGCTTTCTGCATTAGCACTTCAAAATGGCAGACTTGCCGACTACCGCCACTGGGAAGGGTGTGTAGTGGTCAACATCGGCCTACTGCATAGGCGGGAGGTTGTTTTTAATCACTTGCAGTTAACTTATCGCCTTCAGCACCATGTTGTTTAAGGAAGCTTCACCCCTTGGTCAGTCTACGGATGCCAGCTTCCTGTTGTTCAAGGAGGCGCTGTCCAGGGGCAAGTGTCCTGGCAGATGACCCAAGATCCCAGCTGATCTCATTTTCCTTTGAGGGGTTCTACACCCTTTGTTCTTAAGGGTCAAGGAGCCGAATGTCTCTTCTACTGGAGCTTCTTCCTGCCGAGACCCTAGCCTAGCTGAGAGGTGCAGAAGTCCCTCGCTGACTGTTCCAAAGACCTACAGGGACCAGGGTCACCTTCTAGGAATGGGTTTAAATCCTTGGGCCATCAGGAGCCTCACTTGGAACTGTTGAAGCATGGAAGACACAAATCTAACTAAAGATTAAACAGGCAGGCTCTGAATAATAGCAAAAGAACTACTACCACTAGAGGGCCCAGGAGAGGCAAGAACCAAGGAATGTAACACGATGAAGCCTTTGACTGAGTCCCATATAGTTTGGGCAGTGGGGTAGCTGAACCCACATAGCCATTTAACTTGTTCATGAATTTCCTGAGTATTTACTTCAACTTCCGCTGAG TCONS_00042120 r 5' 0 TCONS_00042120 r 5' 0 EMBV3_00378 ATGCAGACACTTACTGGTGCGGGATTGAGAACCCTGGAGCCAACCTGGGCACACAAATTA Gene GeneID:789755|CD300LB:NM_001105023:53_cdna Constitutive 0 NULL GeneID:789755 19 GENE CD300LB NULL CD300 molecule-like family member b EMBV3_12490 TGTCTCCTACGGCAAAATCATCTCCACAGTCCTTAAATTGCCATCAGCCACAAGTCGGGG Gene GeneID:787543|LOC787543:XM_002693622:153_cdna Constitutive 0 NULL GeneID:787543 15 GENE LOC787543 NULL similar to olfactory receptor 1125 EMBV3_27261 TCGGAGGGAAGAGTGAGAGTGTGGCAGCAGAAGCTCCTTTACAGAAGACCTAGCCTGAAA Gene BVT0102_230166 + 0 NULL GK000015.2:29530114-29622642 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063968 1 XLOC_038694 NonCoding TCONS_00063968 XLOC_038694 NonCoding NonCoding - 15:29535487-29535877 - TSS47711 390 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000601805926162726 0 0 0 0 1.24477245456461e-05 0 0 noncoding 0 0 0 0 -0.0203607503183032 0.885560328418073 0.0165650272571662 0.716351844718864 CTATCTGGCTTGTATATCATAGGTTTTCAAACAGTAAATCAGCAAACTCTAACTTACTGTGTTTGGTGCTAGGTTGATAAACAGCAGAGTTTAGTGGCAGTTTGCCACAGAGGGAGATGCAGGCCTGGGGGACTCATTTCCTGAAAGCCTGCAGGCTCAGACTGCTACAAAGCTGATGCCAGCTGAGTCACTCCTGCATCTCAACCTCTAACTCTGAACCTCAGAGGTTTGGACCTCTGATTAGCAGACCTTCACTACCAAGCAAGGTTAATTTAACCCAGGGCTGCCTTCTCATAAGGCCTCGGAGGGAAGAGTGAGAGTGTGGCAGCAGAAGCTCCTTTACAGAAGACCTAGCCTGAAATCTGAAAATCCTAGAAACTCCTTCGGCAT TCONS_00058711 . 3' 5375 TCONS_00058711 . 3' 5764 EMBV3_09312 AGATGTTCAGCCTCTGGGTTTGGGAAGATAAAACTGCCGTGGCGAGAATCCTCAAGCCCT Gene BVT0101_038995 + 0 NULL GK000001.2:130615793-130653070 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002148 1 XLOC_000524 Coding TCONS_00002148 XLOC_000524 Coding Coding KPNA6 1:130554038-130650062 j TSS1087 8942 1 TCONS_00002148_3 533 0.14996645045851 14 0.907022275913063 0.00184732862768105 0.00093850257252498 0.00093144432138484 0.000839016563103704 0.000622259683289839 0.000621690241859758 0.000609249819638451 0.000785018685409651 0.000969813613089095 0.000378838462917357 0.000348637047027909 3.85813085707537e-05 7.53021224772005e-05 0.000252051271871783 0.000167965231853661 0.00307290147234152 0.00121321266983462 0.00236162068047607 0.00138441249735623 0.00158143484533257 0.000780032156380402 0.00160019915182693 0.00134945477287196 0.00169325907422776 0.00199533209833214 0.00190350587436953 0.000949115190101667 0.000988717919751754 0.000472526641673261 0.00113013043886115 NM_001075954.1 KPNA6 Bos taurus karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA. 0.0 3844 99.77 0.239655558040707 NM_012316.4 KPNA6 Homo sapiens karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA. 0.0 5717 80.48 0.682621337508387 TCONS_00002148_3 sp|Q0V7M0|IMA7_BOVIN IMA7_BOVIN Importin subunit alpha-7; 0.0 1099 100.00 0.99812382739212 6 coding 0 0 0 0 -0.469967689376629 0.254899751728717 -0.00387137542814384 0.940376917148435 AAAGATAGGCTCCTGAGGCACAGAGTTTAAAGCAACTTACTGAAGATTGCACAGCTAACAAGAAGAAGCGTCAGTATTGGGACTTCCCTGGTGGTCTAGTGACCAAAGACTTCATGCTCCCGGGCGGGGGGCCCGGGTTCTATCCCTGATCAGAGACCATGGCGAGCCCAGGGAAAGACAATTATCGAATGAAGAGTTACAAGAACAATGCCCTAAACCCTGAGGAAATGAGGCGAAGAAGAGAGGAAGAGGGCATTCAGCTCCGGAAGCAGAAACGGGAGCAACAACTTTTTAAACGGAGAAATGTGGAGCTGATCAATGAAGAAGCCGCCATGTTTGATAGTCTTCTCATGGACTCCTATGTGAGCTCTACCACTGGGGAGAGTGTGATCACAAGAGAGATGGTGGAGATGCTCTTTTCTGATGATCCTGACCTGCAGTTAGCAACCACACAGAAATTCCGGAAACTGCTCTCCAAAGAGCCCAGTCCTCCAATAGACGAAGTTATCAACACTCCAGGAGTGGTGGATCGGTTTGTGGAGTTTCTGAAGAGGAATGAGAATTGTACCTTACAGTTTGAAGCTGCCTGGGCTCTAACAAACATTGCCTCTGGAACCTCTCAGCAGACCAAAATTGTCATTGAAGCAGGGGCCGTCCCCATTTTTATAGAGCTGCTTAACTCGGACTTTGAGGATGTACAGGAACAGGCAGTCTGGGCACTGGGAAACATAGCTGGAGACAGCTCCGTTTGCCGAGATTACGTCTTGAACTGTTCCATCCTCAATCCTTTGTTAACACTCCTTACCAAGTCCACACGACTGACAATGACCCGGAATGCGGTCTGGGCCCTGTCAAACCTCTGCCGAGGAAAGAACCCACCCCCAGAGTTTGCAAAGGTCTCCCCCTGTTTGCCCGTGCTGTCTCGCCTACTCTTCAGCAGCGACTCAGACTTGCTGGCAGATGCTTGCTGGGCCCTCTCTTATCTATCTGATGGCCCCAATGAGAAGATCCAGGCAGTCATAGACTCTGGAGTCTGCCGGAGATTGGTCGAGCTTCTCATGCACAACGATAACAAAGTGGCTTCTCCTGCTCTGAGAGCTGTGGGTAACATCGTCACCGGGGATGACATCCAGACCCAGGTCATTCTTAACTGTTCAGCCCTCCCTTGCCTCCTCCACCTCCTGAGCAGCTCCAAGGAGTCAATCCGAAAGGAAGCTTGTTGGACCATTTCAAATATCACTGCTGGCAACAGGGCTCAGATACAGGCTGTCATAGATGCAAACATCTTCCCTGTATTGATCGAAATCCTTCAGAAAGCAGAGTTCCGTACAAGGAAAGAAGCAGCCTGGGCCATCACCAATGCCACATCAGGAGGAACCCCTGAACAAATCAGGTACCTGGTCTCCCTGGGCTGCATCAAACCCCTGTGCGACTTGCTGACTGTGATGGATTCAAAGATTGTGCAAGTGGCCCTCAATGGACTGGAGAACATCCTTCGGCTTGGAGAGCAAGAGGGCAAGCGCAGTGGCTCAGGGGTCAATCCCTATTGTGGGCTCATCGAGGAAGCCTATGGCTTGGATAAAATTGAGTTTCTGCAGAGCCATGAGAACCAGGAGATCTACCAGAAGGCCTTCGACCTCATTGAGCACTACTTTGGTGTAGAAGATGATGATAGCAGCCTGGCTCCCCAAGTGGATGAGACGCAACAGCAGTTCATCTTCCAGCAGCCTGAGGCTCCCATGGAGGGCTTCCAGCTATAATGTCTGCCTCCAGGGAGGGGAGGGGATGGGAAGCACCACCAACCAGCGGAAGAGCAGCCCTCTGGTGGGCGGGAAACCAGCCCCACCACCATCAGCCACCACACACCTCTGCTGCCCTGGAAACTGTGCTCTTGACCTGCTCCGACCCCTTCCCTGGAGGGAGCACCCTCTGGACAGACAGAACCATCTGAGGCTCACGTTTGGGTTTTGTGACAAGAAGGGGACGTGTTGGGTTTTTCTTCCTTACACTATATTTTGGCTGCACATATGTCTTTAACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAACCAATTTTGCACCTTTTTTTTTTTTTTTTTTTTTTTAATTTTTATTTTTTTCTTCTTTAGTGGTGACTTCCTTCCCTATTATCTTCCTTCATCCTTCCCAGTCCTCTGCCCTGATCTGTGTAACTCTTATCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGTGGGGGGGTGGGAGGGGATGGGAGAAATCCAAAACAAAGTGTTCTTGCTCTGACAGAATATTAATCTTGTATGCTTGGATTGAATTATTTAATTTTTTCTTTTGCACATTTTTTCTTGTATTAAGATTGCTCTTTCCCAGAGCCATGAGTTCCTGGTATTAAGAAACCCAGCTGCCAGCATTGTCTGGGACTAGAGACTGAGGGGGAGGTCACCATGAGAGAAAGGCCCCTCCCTCCCTCTAACCCCTTGCCCAGACCTCTTTAGTTTGGGAGATCCCCTTCACTCTTCTGGGGCATGTGCACCAGTGGGAGTGAGCAAGGAGGAACACAGGTCTTCAGACAGGGCTTCCCATGTGTCGCTACTGATCCCATGTTTCCTACCCACCTTCCAATGGTGCGACCTGATTTCATTTGTTTACTTGAAAATTCCCCTCAGAGTTGAAATGAACCTCTGAGGTAGCTGTATTTTCTCCTAAGCACGCGACAGAGGGCTATGGTCCTTGCTTTCTCCTGAGGAGAAAGTCCTTGCTCGGGTGACCCATAAGTTGCAGAGGAGGTTGGAGTGAGAGTGTCATGTATTGGGATAGCCAGGGGATCCTTGCCTTTGGCCTTTCTTCTCCTCCTTCTTCCTCTTCCATAGGTGGATCATGTATATTTGACTTCCAAAGGAGAGAATGTCAAAAAGTTCTGTATTTTTTTATATTCTATATATTAGGTAGGTCAATCTTATTTGGTCTCAAGAGGAAGAACTGTCCCTGTAATTTCTGTAAGTAGGATACCGTGAGGAAGACCAAAAAGAGATGTGGAAGTTCTTTGGCTCAGGAAGCCTGAACTTGATCCATCTCTCTGCTTGGGTTCCAGGCTACCACCTGGACAAACCCTTAGCCCTGGAGCCTTCATATCACAGGTCAGCCTAGTCTGATTGTCCCAGTACCTGAAGGGAGCAATGGCTCGAGGGCCTGGTCAAGTCTACCACTCTGGTCCTTAGAGCTGAGCATCCTGCTCGCATCAGGAAACCCAGACAGCAGTCTGCCTCCTCAGATTCAGTCTCAAATGCCCTTGTTCACGTGAGTTATCACAGGTGGCTTTCTCTCTCACTACAGAAATACAGCAGCTTCAGGACTTTTTTGAGAGTGACTGATAACTTCCTGGATTGGGATCCCTGTACATGGTTTGGATATTGCCCTTCCTGTGACACTTAAAATCCCAATGCCTTGCCTTTTCCCTTTGAGTAGAGCTACTGCAGTGCCTCACTGGCTTGCCTCTATGCATCAGTGGATTACACAGTAATGAAGTAAAGCCCAGCTGATGGGGTGAGTGGAGCAATTTGTTGGCTAAGTGTAGGCCAGTGGTGGAGCTGAAGGCACACTCTGTCTGCCCTGTCGCTGCTTCCCCACAGAGATCAGTTAGAGATGCCCTGGTCCAAGCTGTATTTTCCCTTCCCCAGAAACAATGCCATTCTTGCTCCCATTCCTACGTATCCCACCTCTGGCTCAGGTGAAATCCATGCCACTCTGCTTACGGATAAAAAGTTCAGGTCCTTTTGCCCATTGGTTTTGAATCTGCCCTCTTTTTCGAGTATTGAGATCCAACTCCAGAGGCGTTTTCTGAGAAAAATGGTTGGGACTAGTGGTTATCACTGAAAAGTGATAGCAGAGCCATACCACCTCAGTGAGTCAGATGCTCCTCTGCAGTTTGGCCATGATAATTACCAAGCCCCACTCTCCCTGGTAGGCAAGGGGCAGGACCCTCTTCACTTGGCCTGCTGACTCCATTACTCCTACAGTTCAAAAGAAAGTCACCCCACCCCTTGATCTTGTCCAACAGCCAGAGCATTTGAGTAAGAACTACTTCTTGTATCTCTAGCAATAGTTAAGTCCCTGACACTGGGGCCATATTCTTCCTGTGAGACGTACACATCCTGCCTTGCCCAGCTGTTCCTACTTTTGCTTCAGATCTGGGACATGTACTAAATAGAAGACTCTTCTGATTATCAGTTACTGCTTGAAGGCTGCTTTCTCCAAGGACTCCAAAGGCTGAAGTGTCTCCCAGGGCACAACCTGAGGACAAATTTCTCATCAGCTAACATGGCCTCTCGGAGCTTTCCTTTGTTTAGTGTCTTCCTCAGACTATGTTTTCCCATTTTATTCCTCTGACCCTCCTTTCAGTTAACAGGTGAAGTTCTTCGAGCCCCCTGAGATGGTAACATCATCTTTTGTGTCCCCCTCTCCTTTGTTCATCTTGCAAAGCAAAATATTGTTTCTTTTTAGCCCAGGCTTGACAGTCACTCTTCGTGGACAGCCCCCCTCTGGACTGCAGACCCTGGCCCAGGTGAAGGCAGAGTTTTCTGACAGATTTCTGAATGGATGTTACAGGGATGAAGGGGCTCCCCAGCCTGCTGTAGGGAACAGCCAGAGAAGACCTGTATTTGAAAGGTTAATGGTTTGGCACATAGTTATTTGCATTTTAAAATCTCTGGTGGGTTGGTGATGTTTAGGTGTGGATTTAGGGGACAAGGAACCGTTTTCTTAGCTAAAGTGTTCAAGTACTGTTTTGAACAGCTATTCATTTTTGCCAGCCCTTCTGGACATCCCACACCCACCCATCTTTGCTAGTCTTAGAAGACTGAGCTATCCCCAGTGACTGGCTGGCCTTGGTATTGGCTGCAACCTTGTTAGAACCACACAGGTTCCATCCTCACCTAGCCAGCCTGTTTACTTCAGGCAGTGGGTACAAAGGACCCTTCCAAGGACAGATGTAAAAGACTTCAGCTTTCAGGGACCCTTTGTGTTCCCCTTTACCTAGAACCCCTAGATCTACTCCCATTCTCTTTTCCCTTGGAAGACTTTCCAACAGCTCTATTTTTTAGAGCTGAACTACACAGATTATAGCTGCTACTATGCTTAGTCAGGGAAGAGCAAAAGAAGGCTCTCGGGTACTGACTTTCTATTTCCCTCAAGCCAGACCAGTTTAATCTGAAAACTCTAGCAGAATGAACTGGACTTCCATTTTCTCACATATGCCTGCCCTCCCCCTACACTCTATTATTATAATAGAGTTACCTTTTCTAGCAAAATAGAAGGTAAGGAGACGAATGCCTATCAATACTTCCTCCTCCCACACGCCCCCTTCTTTGAAGGGCTCTCAGCTCATTTGTTCAGGCCACGTCTCTTCTCCCCAAGACTCACTTAGTTTGGTGTCCGTCATCTTGAATATTCTTCAGTAGATACATCTTTGGGGCTCATGTTCTGGATTCTCAGTTGAAGGGAGGGAGCCAGACTCTACAGGTCTCTGCAGGCACTACAGGGACCCATAGGGTGCTGGCTGGGGGCCTCCTTGGCAGGCTGGGGAAGAGTGCAAGGCTCAGTGCACGAACCATAGGAAAGGCTCACAACCATAGGAAAGGCTAGCAACATCTTCCAGGCAGGACTATCCTAGAAATAAGTACATGTGAGACTTGAGAAACGGCTCAGAGTAGGTTTCTTCCACAGCTGTTTTAGGATTGGACATTTTAGACCAATCTTGTCCAGTATTTTTTCTGTCTTTTCTATTTTTCTGTTAAGCCAGCAAGCTGAGAATTGGGCCCTGCAGGGATCCATGTGGTAGGCAATAGCTGTTCTTTGGCCAAGGCCTTCATAAAGGATTCAGTCATCCCATTGACTGTTCCCTAGCCCCACCCCTAGATGAAGACCATGGTAAGGGAAGAATTTTGAGGTCAGTACAAACCAAATAAGTCTGTAAATTAAAGCTGTTAGTTTTCCTCTGAGAGGGCATTTTGCATCAGGCCTGGGCTATGTTCAGAATCAAACCTGAAAAAAAAAAAAAGAATCAAACCTGGCTGTGAGTTAGAAGAAGCACCGTTAAATTTTAGACCTAGAACACCCCAGGAAAAAGGTTTGTGTAGTGTGTCATAAAGGCCGTGAGTGTGTTTGGGCCACCTTACTACTTCTGGGCCAGCCTGACTGCTGCTGTGCACATTAGCACATACCTGAACCCCTCTGCTAAACTTAAGCCCTGCATCCCTACCTAGGTCAGATGTTCAGCCTCTGGGTTTGGGAAGAGAAAACTGCCGTGGCGAGAATCCTCAAGCCCTGGAGTTGGGTATTGGCTCTTTCAGCCAGTTTTTGTGGGACTTGCCTTTGGTTGGACCACTAAAGAAGCAAATAAGGTGTGAGGTTCCAGTTACCCAAGACAGCAGAGGTCCCTCAGAAACATCTTGGGTTCCCAGCTACAGACCCTCGGAAGGTGAATCAAACCTGTTTCCGCACTGGTTTTTCTCTCCAAATTTATTTTGCTTTTAAGAACTATAAACTCTAGCTATTGTTTTCCATGTTCTCAGGGCCCCTGGGTAGACAGACAAAGCTTGATGATTTCAGAGCAGATATAGGCCAAGAAACCATGGCATTGAGTGTGCTGAGTCCAGACAAATGATATTTATATACACATCCAAATTTGAAGAGAAAATGTATTTCTTTAGGTTTCAAACACTGTAATAGATATAAAGCAAAAATAAAAACCTGTTGCAAAGTTCTAAATAGTGTTCTTTGGAGTGATCCTAGACTGGATTTCTTGGAAGTCAGTGAAGTGAAGGTGTTTAAATTTATGGCCTAACAAGTGGAATTAAGAATTGTTAACAGCCTGCTTCTGCTACAAAGCATTTTTGAAATCAGCTTTATTGAAATATAACTGACATACAGTAAATGGCACATATTTAAAATGAACAATTTGTTAAGTGTTGATAAATCTACATCCATGAAACCATCACCACAATCAAGATAGTGAACATACCTATCACCACATGCCCCTTGGGAATCCCTCCTTTCTGCCTAAAGCTCAGCAACCACTGATGAGAGTTCCGTCTCACTATGGTTTAGTTTGCATTTTCTAGAGTTTCTCTAAGATTTTCACATCATTTCATCACTACTTCACAGCCCAGTGAGCCCAAAGTAGTTCATAAACTACTCACTTTGGTTTACATCAATTCCTAATGTAGCAATTAGACTAGCAGCCACAAAGTTGATACAACTCAAAAGGAAGGTTTTAGTTGGCTTGAGTGCATTTTACGTTTTAATTCATTGCCAACATTAAAAGATGCAGCTGTATTTAAAAATAGCTGGCACTTCCCTAGTGGTCCACTGGTAAAGAATCTGCCTTCCAATGCAGATTTGATCCCTGGTCCAGGAACTAAGATCCCACAGGCTGTAGGGCAACTAAGCCAGCAGGTCGCAAATAGAGTCCACGTGCCACAATTACTGAGACTGTGCTCTAGAGCCCCTGCTTGGCAACCAGTGTGCGCCGCAACTAGAGAGAAAAAAAAAGCCTCCCCACCCCCAAATATCTGGCACTCCTAGGCGTGAGTTTCTGCTTGAAGACAATCTGCAAGAGTTCTATTACTGTTTACCACCATTACCAGTGGGCTCTCTGGCAGATATTAATGTTGTTCCCATTTCCTCTTATAGCAAAGGAAAAAGTAACTTTTTAACCCATTTTTCTATCAAATTTTCTTATTCCTTGCCTGTCTGTTTTACTCATTACCTAGCAGGGCTTCCCTGAGAGCTCAGTTGGTAAAGAATCCACCTGCAATGCAGGAGACCCTGGTTTGATTCCTGAGTTGGTAAGATTCACTGGAGAAGGGATAGGATACCCACTCCAGTTTTATTGGGCTTCCCTTATGGCTCAGCTGGTTAAAAAAAAAAGCTGGCCCTCAATGCAGGGAGGGACCTGACTTCGATTCCTGGGTTGGGAAGATAATCTGAAGAAGGGAAAGGCTATCCTACCCACTGCAGTATTCTGGCCTGGAGAATCTGGCCATGGACTGTATAGTCCATGGGGTCGCAAAGAGTTGGACACAACTGAGCAACTTTCATAGCTGGCCCTTGGAGGCCACTGTTGACCCTTCTCCGTACATCACTCCTCTCACCCCATGCATACTTTGTTCTATTGTTTTTTATCTCTGCCTAGAACACCCTATTCTTAACGCAAATCCATCAAGGCCTGATTCATATGTTACCTCAAGAGATTTCCCACATGCTTTTCTGGAAATAATGAGGGCCTTGGTTTTTAGAGACCTGAATTCCAAACTTTTTTGAGCTTGAGTTCCACCTTTTACCATTATTTCAATACTGCCTCTCAATGTTACTTGGTAGACACTGCCTAAGGGGTGGGGAAGAGCATTGCTCTGAAGTCTCTCCAACTAGGGAAAAATATTTTAACATCTTAAGAGCTCTAATATACCCATCTGAATGCGGACTTCCAAAGAATAGCAAGGAGAGATGAGAAAGCCTTCCTCGGTGATGAATGCAAAGAAATAGAGAAAACAATAGAATGGGAAAGACTAGAGATCTCCTCAAGAAAATAAGAGATACCAAGGGAACATTTCATGCAAAGATGGACACAATAAAGGACAGAAACAGTATGGACCTAACAGAAGCAGAAGACTAGAAACGTGGCAAGATACACAGAAGAACTATACAAAAAAGATCTTAACAACCCAGATAACCTCGATGGTGTGATCACTCACCTAGAGCCAGACATCCTGGTATTCGAAGTCAAGTGGGCCTTAGGAAGCATCACTATGAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAACTATTTCAAATCCTTAAAAATGATGCCGTGAAAGTGCTGCACTCAATATGCCAGCAAAACTGGAAAACTCAGCAGTGACCACAGGACCG EMBV3_19630 GTGTTTCACACTTACTATGGATGCCCCCGCTGTACACCTGACTTGGGTTTGTTCTTGAGG Gene BVV0101_021821 + 0 NULL GK000021.2:68901645-68908372 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120187 TCONS_00120186 1 XLOC_073106 Coding TCONS_00120186 XLOC_073106 Coding Coding TECPR2 21:68837085-68907436 j TSS89828 9642 1 TCONS_00120186_4 718 0.0188757519186891 17 0.86318407960199 7.09539449103758e-07 1.50448159939096e-07 8.9729854162634e-05 8.56697425476409e-06 6.24428008804321e-05 2.7881051119404e-10 2.29513897000615e-05 0.000158232932101176 2.28722394645557e-10 1.00338878626059e-08 1.20416925225147e-05 2.00061003819384e-05 8.91163548592216e-06 9.49366098020948e-07 2.57762365819075e-130 0.000815519381028718 0.000426934892700867 7.79312974749786e-05 5.05335935229773e-05 4.02675580902576e-10 2.97302896933879e-07 0.000116171920403772 5.51354278480405e-05 0.000158132287128404 2.72679392214551e-05 6.89597736458814e-07 4.06816513418845e-05 0.000151366841155443 9.51321020861289e-05 8.14017257287799e-37 NM_001192690.1 TECPR2 Bos taurus tectonin beta-propeller repeat containing 2 (TECPR2), 0.0 6704 100.00 0.385397220493674 NM_014844.3 TECPR2 Homo sapiens tectonin beta-propeller repeat containing 2 (TECPR2), 0.0 2542 82.62 0.258037751503837 TCONS_00120186_4 sp|O15040|TCPR2_HUMAN TCPR2_HUMAN Tectonin beta-propeller repeat-containing protein 2; 0.0 1278 86.76 0.998607242339833 1 coding 0 0 0 0 0.0509160202242012 0.69237770927157 0.0133231658687182 0.854997026417678 CTTTCAGGGGAAAACGGAGTCCATCACGGTGGTGAAGCTGCTGAGCTGCTTCGATGACCTGGTAGCAGCAGGCACAGCCTCTGGGAGGGTTGCAGTTTTTCAGCTTGTATCCTCATTGCCAGGGAGAAATAAACAGGGCGTCTGCCAGTCGCACCTGGTGCTGGAGGAGCCGGCCTCCATCGTGCAGCTGGACTACAGCCAGAAGGTGCTGCTGGTCTCCACGCTGCAGCGGAGCCTGCTGTTCTACACCGAGGAGCGCTCTGTCCAGCAGGTCGGGACACAGCCGAGGAAAAGCACTGGGAAGTTTGGTGCCTGCTTTATACCAGGACTCTGTAAGCAAAGCGATCTAACCTTGTACGCGTCCCGGCCTGGGCTCCGGCTGTGGAAGGCCGACATCCACGGGACTGTCCAGGCCACGTTTATCTTAAAAGACGTCTTCGCCGGAGGAGTCAAGCCTTTCGAGCTTTACCCACGCCTGGACTCCGCCGAGCGGGGAGGGTGCAGCTCACCTGAGAAGCACCTGGGGCTCGTGTCGTGCTTCTTCCAAGAAGGCTGGGTGTTGAGTTGGAATGAATATAGTATTTATCTCCTGGATACCGTCAACCAGGCCACAATTGCTGGTTTGGAAGGATCAGGGGATATCGTGTCTGTTTCCTGCACAGAAAATGAAATATTTTTCTTAAAGGGAGACAGGAACATTATACGAATTTCAAGCAGGCCTGAAGGACTAGCGTCAGTAGTGCGGGACGGCCTGGAGACATCGGCGTGCGCAGAGCAAGTCCACGGGCCGCGTGCGGAGAAGCCGCCAGCGGCCACACCTTCCGAGACGAGGCTCCGGGTCTCTTCGGTGGCCAGCTCCGTGGCCAGCGAGCCCAGGAGCAGGAGCAGCTCGCTCAACTCCACGGACAGTGGCTCTGGGCTGCAGGCAGCCCCCGAGTTGGGCAGGGGCGGCCCGCTCACCTCGAAGAGATTCAGTGTGATCAGCTCGGAGGACTTCGACCAGGAACTAGTGGTGAAGCCTCTCAGAGTGAAAAAGAAGAAGAGGACGAAGAAGACAGTCGAAGGTGGGAGCAGCGCCACGGGCCCCAGCCCCCTTGAGCCGACCCCCGGCCGTGAGTGTCCTGGGGACAGCCCCCAGTCCGTGAGCACGGACCTGCCGTCTGCAGCCTCCAGCTTGGGCAGCATCGTGGACCGGACCAGTACAGGGTCTCCTGACCAGGAGAGCAGTCTCAGCAGGGAGGCCAGTGGTGTGCTGCTGGAGTATAGCGACCCTGAGGCATTCAGTGTCCTGGAGGTCCCCCTGCCCGCCCCTGACCTGCTGAACGGAGGAGCTGAGGGGAGAACTGAAAGCCCCCTGGGCAACGGCGAGGGTGGGACCGAGCCGCCCTGTGGGGCGGGGAGTTCCTCCTGGCACCCGACGGAGTTTGCGGAGGACACTGAGGACATCGTGGAGCTTGAGGAGGAGCCTCAGCCTGCGGACAGTGGGCCGGGCAGCACAGCAGAGGCCCGGGGGGACGGGGCCGTGCAGCCTAACGGCCCCCCGGGTGCTTTCTCAGAAGCCTGCCTCCTGGACTCGGCGCCGGAGCCTTCCCACCTCAGCTGGGCCCCCAGTGCAGAGCAACGGCTTCCGGGGGCCACGGCTGATGAAGGCAGAGCTGAGAAGCCCCCCGAAGAGCAGGGCTTCCTGACGCACATGGGAGCCCCCCACAACCTCAGCCCAAGTCCCCAGCGCACCGCTCCTGACGCTGACACGGGCCAGACGGTGGTCGTCACTTCCAAGCGTGACCTGGGTGGGGGAGGCCGACTACCTCCCCGGACCTCGGCCGCCAGCTCCCAGGAGCAGCCCCCACGGGACCAGGTGCTGACATCCAGCGATGAGGAGGACATCTACGGCCACGGGCTGCCCTCTTCATCCTCGGAGACGAGCGTGACGGAGCTGGGAGGGGGCCGCTCCCTGCAGGACCTGAGGCAGCTGGGCACGGACGACCCCGGGCTGCTCAAGGCCGATCAGTTTGCAGAAAGCTGGATGGGCTACTCCGGGCCCGGCCACGGCATCCTCAGCTTGGCGGTTTCCGAGAAGTACCTCTGGTGCCTGGACTACAAAGGCGGCCTGTTCTGCAGCGCGTTGCCGGGCGCTGGGCTGCGCTGGCAGAAGTTCGAAGATGCCGTCCAGCAGGTGGCAGTCTCGCCCTCAGGCGCCCTTCTTTGGAAGATTGAACAGAAGTCTAACCGAGCCTTTGCGTGCGGAAAAGTGACCATCAAGGGGAAGCGCCACTGGTACGAAGCTCTGCCCCAGGCGGTGTTTGTGGCCCTGAGTGACGACACGGCCTGGATCATCAGGACCAACGGGGACCTGTACCTGCAGACAGGTCTCAGCGTGGATCGCCCCTGTGCCAGAGCCGTGAAGGTCGACTGTCCATTCCCGCTGTCCCAGGTCACTGCCCGCAACAGCGTGGTGTGGGCGCTGACGGAGCAGCGAGCCCTCCTGTACCGGGAGGGGGTGAGCAGCTTCTGCCCCGAGGGGGAGCTCTGGAAGTGCGACATAGTCAGTGAGCGGCAGGCTCTGGAGCCTGTCTGTGTGACTCTCGGGGACCAGCAGAGCCTGTGGGCTCTGGACGTCCGAGGAAACCTGTGGTTCCGGACTGGCATCGTTTCCAAGAAGCCCCAAGGAGACGACGACCACTGGTGGCAGGTGAGCGTCACGGACTACGTGGTGTTCGACCAGTGCAGCCTGTTCCAGACCGTCATCCGCGCCACGCACTCCGTGGCCACGGTGGCCCAGGCACCCGTGGAGAAGGTGGCGGACAGGCTCCGCACGGCATTCTGGTCCCAGCAGCTGCAGTGCCAGCCGAGCCTGCTGGGCGTCAACAACAGCGGCGTCTGGATCTCCTCGGGCAAGAACGAATTCCACGTCGCTCGAGGGAGTCTCATCGGCACTTACTGGAGTCATGTTGTTCCCCGGGGGACCGCCTCTGCCACAAAGTGGGCCTTTGTGTTGGCGTCCACTGCCCCCAGCAAGGAAGGAAGCTCGCTGTGGCTGTGCCAGAGCAGCAAGGACCTGTGCCGCCTGAGTGCCCAGCACGCCCAGTCCCGCCCGTCCACTGTGCAGCTGCCCCCTGACGCCGAGATGAGGGCCTACGCCGCCTGCCAAGATGCCCTGTGGGCGCTGGACAGCCTCGGCCAGGTGTTCATCCGGACGCTGTCCGCCAGCTGCCCCACAGGCATGCACTGGGCCCGGCTGGACCTCTCCCAGCTAGGAGCTGTGAAACTGACGAGTCTGGCCTGTGGAAACCAGCACGTCTGGGCCTGTGACTCCAGGGGTGGCGTTTACTTCCGCGTTGGCACCCAGCCGCTGAACCCCAGTCTGATGCTTCCGGCCTGGATAGCGATTGAGCCGCCTGTCCAGCCTGCCGGGGTCACCTTGGTCAGCGTCCACTGCAGCCCCGACGACCAGATGCTGTGGGCCTTGGACAGCAGGTGGAACGTGCACGTCCGAGCTGGGATCACCGAGGAGATGCCAGTGGGGACTGACTGGGAGCATGTGCCAGGGCTGCAGGCCTGCCAGCTGGCCCTGAGCGCCAGGACCGTGTGGGCCCGGTGCCCCAACGGGGACCTCGCCCGCCGGTACGGCGTCACCGACAAGAACCCTGCCGGGGACTACTGGAAGAAGATCCCTGGGAACGTGACGTGTGTTACAGTGACCGCGTCAGATGAGCTGTGGGCAGTGGGCCCACCCGGCTACCTCCTCCAGCGGCTGACGAGGACGTTCAGCCACTCGCACGGGGCCCAGGGCAGCCACGCCACCACCCCACACCCTGAGGACCTGGAGGACGAGTGGGAGGTCATCTGAAGGTGCCCCCGGGAGGGCAGACGCCGGGCCCCAAGTGGGGACACAGTCGGCTTCAGAGTCACTCGCCCCAGACACACCTCGCCAGCCCCCGTCAGACACGTCTAGCCAGGTCGGACGGCCCACTTTGCTTTCATCCGTGTTCGTCTGTGTCTCGTCCCAGAAGCCACAGCCTCGGCCGAGGGTCCGAGCCGTCACGACAGCAGCAGGGCCTCTGGACTCCCGCGGAGGCCGTCCCGGGTGGGGCCGGCGGCTGCTGCGGTTGCATGCAATAGTCCCCGCTGCACCGCCGCCGCCGCCGCCTCAGCACCGGCCGCCCCCAGCCCGGGTCAGCGCTGCCCGCTCCCGCCGGGGCCGCCTCCATCACGGCGCCCTCACCTCCTCTCTGAGACGCAGTCCCGGCACACGTTCCCTGCGGACGCGCCGGATGGGAAGCCAGCTGTGCCGGGACGGGGCTACACGCACGCACATGGCACGTGCACGCACGCACGCGCGCGCACACCGCCCCCCTCCACCCCCGACCCCGCCTTGGGGCCAGGCCCGCCCCGGCAGACACACAGCTCAGCGGGAACAATAAAGGCCGGTGGGCGAACGAAACCCGACGGGTGCGCGTGAATCCCAGGCGGCGGAGCGGCCGCGGGGCCTGAGCCCCGCTGTGACGTAGGAACGTCTCAATGACACAGCCCACGCTGCTGGGGCATCGCAGAAACTCGGGCACCCTCAGAGGGTGAACCTCCTAGTGATTGCCTTTTCTGTTGTATTACAAACCTACCTGAGATACCTCATCTGAAATCCGATCTTACAAGTTTGAAATGTATTTTCTGGCCCAGTGGAAGGCCTTTCGCCCCTTCACGTGGTCTGTCCTGAGCCCGCGCTGTTCTCTGCTGCGTGTCCTCCTGGGCAGGGCAGCCTCCGTCAGCGGGCATCCACCTCGGGAGGCTAGATGCCCTCACAGGGCCACAGCTGGTGCCTGTGTGGTCCACGGCTGCGTGTGGCTACGTCAGACTTCAGTCCGTGGCCTCGCCCTGCGGGGCCCCCTCGCGTCCCCCAGCTCTGAGAGGCGGCCCCCGCCGCCCGGCGGGAGTCCTGCCGAGCTGCTTTTTTTAGCCTGCCCTTGGCGTGGGGCCCTGTTACTCGAAGCCTATTTTCTACTAGGCAAGTGTGTCCAAGAGCCCCTGGGCCACAGGTGAAAAGCGGTAAGATGCGCTCTGTGACGGGACCCAGCCAGCCAGGAGGACGAGAAGCCACAGTGCCCGCCTGCACCTCACCCCTCACCCCGACAGAGCGCTTCACGCGTGCCAACAGCGGAGGCCCCTGTCCCGCGCCCGCTGTGCCTTGTCTGGCTCCTCTCCCCGCTTGGCAGAGCTCTGCTGAACCCGCGGGACTTCAGTGGATACTTTGCAGTGACTTGTAGCTTCAGTGCTTTGTACAAGTTTCCTTTCTGGTTTCTCAGTTGTGCTTTGAGACAGTGCAATAAACTCGACCTCTCCCCCACCCACCCAGTCCAGTCTGACGTCTGAAGGGGAAAAGCTGCCCTGAGTGGCAGTCGTGCAGGCTGCTCCCACCCATGCCACCGGGACTCTGCTGCTGGTGTTCCTGGCCCAGCCCCCCCGCCAGGAGGGTGTGCCCGGGGGGTGATCCTGGGGGAATGTCACTCCAGAGGTGCCCCTGGGGGCAAGACCACGGGCCTAGTCTCCACCCACGACCCAAAACCAGATACCAGAAGTGCCCAGGTGGAAACCAACACGTGGAGAAAGATCGTGTTCACAACACAGCAGGCCAGCCAGCCGCGTGCCAGCAAACAACCCGAATGAGACACGTCAGATTCGGTCAAGACCTGGCCAGGCTTTATGGAAGACTTCTGTGAAAGCTTGACTGGGAAGGCGTGGCTGATGTTGCCGAGGGAAAGCCACAGACACCATGCAAAGACATCAGTCCTCTCCAAGGCATTTATGGCTTTCTCTCCATTTGTCAAACTTTCCACTGGGGTTCTTTCTGTTGGGGGAGTTAGGGACGACTCCATAAAATAACGTTTGTGCCCACAGATGTGCTCTGAGGGTCTCCCAGCTCACTGGGGCTCCAGTGAGACCCAGCGAGGGGAAGTAAGTTGCTCAAGGCGGCAGAGCGCGCTGGGACTGGACCCAGCTCCAAGGGCTCCAGGCCTGTGCTGGGAAGAAACAGGTGGGCAGTGCTGAGTGATGACGGGCCAAATGAAGCAGGCCGTGGGTGGGAGGGCAGTGACATCAGCGGCCCAGCAAGGACCATGGGGAGTTAGCCAAATGGAGGGGGAGGCGACTGCGAGCTGGCGTGGCCCTCAGCCACACCGCTCCGGTGAAGCAGATACCAAGTGGACGAGAGAACCTTAAAACTAGGGGGCAAAGGACAGTAACTGACTTCTGGATGGCAAGCGCTTTCTAAACCCCAAAGTGGTGGGAAAAGTCAGAGGAAAATAGTATATTATTTCCTCAATTGATTTCCTCAAATTATAACGATCTTATACATAAAACATAAAAGGGGAAACAACTGCAGCAAGTCAGAGGAACAGCTGAGACGCACCTGTGGACAGAGGCGAAAGGGCACTGCCTTAAGAGCCCCCAGGGTGCACGTGGAGCTGGCAGCAGCCTTACAGCCTCACAGCCTGAAAGCCCTACTTCTAGAAACCTGTCCTCAAGAACAAACCCAAGTCAGGTGTACAGCGGGGGCATCCATAGTAAGTGTGAAACACTAAAAACAGCTGACCAACAGCAGCTGACATGTGGGGACATTCCTCTCGTGAAACAGTATGCAGCTGTTAAAACCGTGTGCCCGGGAGGAAATCTGTGCCAAGCAGTCTCTCGGGCAGTTTGACTGTATCATCGCTAAATCTCTTGGGCGTGGTAAGGAGAACGTGGTTTTGTAGGACTTCGTACACAGAGAGGAAGATAACACACGTGTTTGCGTTGCTCTCTCCTAACTTCTGGTGGGTTTGAAACCTTTCATAGTAATTCCAAGGGACACAGAGGGGCAGACACGACACGCAGCTGTCGCCTGTAGCGTGTACCTTTTTGTATCTTTTGAATTTGAGCCATGTAAATGTATTATTTATTCCAAAAATAAATAAAATTTACATTTTAAAGACTCAGTCCTCTCTAACATCAACTCCTTGTCATACCAACACTAGTGGAATTAAATAATCACAAAATAAACACCAGAGGCTGTTTTACACAATGTTTTACAACATATGGAAATGCTTATTCTACAGTAAGTTTTTAAATACTCAATTTGATCTGATGGCAAATCTGTACGTAAGAAATAAGCATAGAAAAAAATTTTAGCATATGTATATGAGTGCATAGAAAAAGCCAGAATACACCAAAATGCGCGCAGCGGTCGCCTGGGTGGTGGGGGGCCCGCAGGCAGGTGGCCCCTTTACTTGGGAGCTGCGCAGGCAGGGCTCTGATCCATCCTGCCCTGAGTTTCCCGGCACAGTCTGACTGTTCTGCCATGAGCCTGCATCTATAAGCAGAAATTCTTTTTAAAAAATCACTGAAGATACAGGAATCCCCTGGCAGTCCAGTGGTTAGGGGTGCAGGACTCCAAGCTTCCACTGCCAGGGTACAGGTTCCATCCCTGGGGGGAAACTAAGATACTCACAAGCCACTGCCAAAAAAGAACACTGAAGATAGAAATCTCTTCACCTCTGACTTGACTGGGATGGTTACACATGTACTGACGGGGGGCTAACTCCTCAAACCACACAACTGAAGTCTGCATTTATTACATGTCAGTCATGCCTCAATTTTAAAACGGAGTGGGACAAAACCGGTCCCCTCATCCACTCGGTCTCCTGGAGCAGAAGCTGGTTCTCCACCGCCTTCCCTAAGCACGCCTCCACATTTGCCTTTCAGGAGGCATCCTTGTTCTGCACAGGACTGGGGAAAACTGCTCTCAGTACAATATTTGAAGGTTGAAATCGGGAGGAAAGGAAATCAGTGGGGAAATCGAGGTAGTGATGGGAGAAGTCAGCACACGAGGAGGTGAAGGCAGGCCCCGGCGCGGGGTTGTGTCACCACCCCCAAAGGGCGCGGTTCAGGGCCGTGTGTCCCTTCCAGGCTCCAGGAACAAGTCATAGCACCTCCCCGACAGGCATCTGGGGTGCCCAGATTCTGGCCCCAGAGTTCTCCTGTTTGGGAGTTCACCAGGCCCAGGGGTGGGCATGCTGGAGGCAATCTGGCCGATGCCAGGTTTCCTTAGACAAGGTCCGTGGAATGAAGGAAGTGAACAGAAGAATTCTGCCCGAGTCGTGGGCCTTGCTCCAGGCAGAGCTGTTGCCTGTGAGAAGCCGCCAAGGCCACCCGCCAACAGCCGAGAGCCGCATCTCCCGGCTGCCTCTGGCCCCCTCCAGGCCGTCAGGTTCATCGCCAGGGCGGCGGTGGTGATGGGGCTGGGGAGGGGCCCCTGCGGGAGCTGGAGGGCCCCGGGTAGTGATAAGACAAGCACCAAGGCCCAGCCACCCTCGTGCAGGCCAGCAGCAGCAGCCAGATAACCCCGAGGTCTCCACCCTGCGCTGGGCTCCAGGTTCTCTGTACTCACACCAGGGCGCCCTGAGCCAGGCGCCCCAGGCTCCGCGGGAGCTGCGCCAGGAATCAGGCCCCGCTCTGCTTCTACAGGGTGTCCTCGGCCTTCCCACAGATCCCTGTCCCGCCCAGCCACGGCGAGGACACCCCCACTGCCCTTCACCCCCCAAGCTACGAAGCTGGGCTCTGGCTAGACACCCCCACCCCGGCCCTGGTGCCCGCAACTCCTGCCCAGATCCTGCCCTGCACACAAGGAGCCTCCCAAGGGTCACCTCCTGCTCACTGGACAATGGATTCTGTGGGGTCCCCACCAGGGAGCCCCCCCAACCCTGTATCACCCCATCCTCAGCCCAGGGAGCTCAAAGGAGTTTGTCACCAACGGGTCAGCTGTAGGTTTAGCAGGGAAGCGAGTGAGGGCCTAGCCCTGGGCCTCGGGCCAGGAGGGCTCAGCCCAGAGTGGCCAGAGCTGGGAGCAGGGAGACGCGAGGGGAAGTCTGCACGCCCTGCAGGTGCCCGGGCTCTCTCCAGGCGGAAGCTCCAGGGCACAAGTGCGCCCCGAGTCCCCAGAACCTCCCGAGCCCAGCCCCCAGGAGCCACGGCACGTGGTCTGCATTCGCCATCTCCTCCAAGGAGCGTGCCTCCCCAGCAACACATTCCCGGTCTTCATACCCCAGGGCTCCTGATGCCCCACATTTTAAGGTAGAAGAGCTGTTAGTATCCACTGCCCGCCAAGTGTCAAGGTTCAGAAAGTCTGTTTAACTGGGCCAGGACACAGGAGGCACCCTCACCCCCACCAAGAATCTAGGGTCAGCACTGGGCAGAACTGACCCCCACTGTCCCCTACCCCACAGGGCTGTGCTCCTGCCCACCCTACACTTCCCAGGAACATCCTTTTAGGTAGGGAGCTTGGAAATGCTCCAAAACCCCTCTGAGGGCAGTTGGGGACACTGAGGCCCAAGGCAGGGATGTGCCCAAAGTCACCCTGAGAAGATATGGCAGATACAGACCAGAACCAGGGCGCTCCCACCCCTCCCCTCTCACAGCCATCACCCTGGCACTGCCACCACCTCCCAAGCCTCTTCCACCCCCAGCCAGACTCCCCTCAGGGACGCCAGGGGCAAGGAGGGCAGTGGGCGCCCCTGGCCAAGCAGTCAGGGTTCATCGGGCAGCTCCTGAGCCCTCAACTCCTGGCAGCACGCCGTGGCTCTCCAGCCCAGCCGGCACGGGTTGAATTTCACC EMBV3_33125 GTTTACAGTTTGTCGCAACAGCCATTTTCTTGGGAGAAAGCTTGAGTGTAAAGCCATTTG Gene BVT0102_028375 + 0 NULL GK000014.2:31794503-31840010 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053127 TCONS_00053128 TCONS_00053130 TCONS_00053126 TCONS_00053129 1 XLOC_031658 Coding TCONS_00053130 XLOC_031658 Coding Coding LOC100849042 14:31801397-31907634 = TSS39263 3080 1 TCONS_00053130_4 483 13 0.971130313641327 0.00500318956559082 0.00591187265756913 0.00520169242219377 0.00678716003710044 0.00657683438469091 0.00211175770501187 0.00516773601507893 0.00568454936825675 0.00813713999356601 0.00245673911671403 0.00108362788836574 0.000682353825824523 0.00171275288314112 0.00354063873069653 0.00314124632981406 0.00556510505924881 0.00413468598386576 0.00251199315353527 0.00680646689159736 0.00730959911889405 0.00216763483428304 0.00278484062541651 0.00154325367957119 0.00192305181920396 0.005122845693692 0.00475343468312289 0.00281618560545847 0.000367245428992569 0.000914315789124794 0.000468620777424384 XM_003583039.2 PDE7A PREDICTED: Bos taurus phosphodiesterase 7A (PDE7A), transcript 0.0 5555 100.00 0.999675324675325 NM_001242318.2 PDE7A Homo sapiens phosphodiesterase 7A (PDE7A), transcript variant 3, 0.0 3887 88.37 0.999675324675325 TCONS_00053130_4 sp|Q13946|PDE7A_HUMAN PDE7A_HUMAN High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A; 0.0 974 97.10 0.995859213250518 1 coding 1 1 1 1 1.12422767003168 0.0876094594650123 -0.486518120100399 0.00350005092251253 ATGGAAGTATGTTACCAGCTGCCGGTGCTGCCTCTGGACAGGCCGGTCCCCCAGCACGTCCTCAGCCGCCGAGGAGCCATCAGCTTCAGCTCCAGCTCCGCGCTCTTCGGCTGCCCCAATCCCCGGCAGCTCTCCCAGAGGCGTGGAGCTATCTCCTATGACAGCTCGGATCAGACTGCACTGTACATTCGTATGCTAGGAGATGTACGTGTAAGGAGTCGAGCAGGATTTGAATCAGAAAGACGAGGTTCTCATCCATATATTGATTTTCGTATTTTTCATGCTCAATCCGAAATTGAAGTTTCTGTGTCTGCAAGGAATATCAGACGGTTACTAAGTTTCCAGCGGTATCTTAGATCTTCACGCTTTTTTCGTGGTACTACTGTTTCAAATTCTCTGAACATTTTAGATGATGATTATAATGGACAAGCCAAGTGTATGCTGGAAAAAGTTGGAAATTGGAATTTTGATATCTTTCTCTTTGATAGACTAACAAATGGAAATAGTCTAGTAAGTTTAACCTTTCATTTATTTAGTCTCCATGGATTAATTGAGTACTTCCATTTAGATATGATGAAACTTCGTAGATTTTTAGTGATGATTCAAGAAGATTACCACAGTCAGAACCCTTACCACAATGCAGTCCACGCTGCCGACGTTACTCAGGCCATGCACTGTTACCTAAAAGAACCTAAGCTTGCCAACTCTGTAACTCCTTGGGACGTCTTGCTGAGCTTAATTGCAGCTGCCACTCATGATCTGGATCATCCAGGTGTTAATCAACCTTTCCTCATTAAAACTAACCATTACCTGGCAACTTTATACAAGAATACCTCAGTTCTGGAAAATCACCACTGGAGATCTGCAGTGGGGTTATTGAGAGAATCTGGTTTATTCTCACATATGCCATTAGAAAGCAGACAACAGATGGAGGCTCAGATAGGCGCTCTGATACTGGCCACAGACATCAGCCGCCAGAATGAATACTTGTCCTTGTTTCGGGCCCATCTGGACAAGGGCGATCTACATCTGGAAGATGCCAGGCATAGGCACTTGGTCTTACAGATGGCTTTGAAGTGTGCCGATATTTGTAACCCGTGTCGGACCTGGGAATTAAGCAAGCAGTGGAGTGAAAAAGTAACAGAGGAATTCTTCCATCAAGGAGATATAGAAAAAAAGTATCATTTGGGTGTGAGTCCACTCTGCGATCGTCAGACTGAATCAATTGCCAACATCCAGATTGGTTTTATGACCTATCTTGTGGAGCCTCTGTTCACGGAATGGGCCCGGTTCTCCAATACCAGGCTGTCCCAGACGATGCTCGGACACGTGGGGCTGAACAAAGCCAGCTGGAAGGGACTGCAGAGAGAGCAGCCCAGCAGCGAGGACGCTGATGCTGCATTCGAGGAGTTGAGCTCACAGTTATTACCTCAGGAAAACCGGTTACCCTAACCCCCAGAACCAGTGGACAGATGCCTCCTAGAGGTTGTTAGAAATGTGAAACGGGGTCTTGAGGTGAGAGAACTTACTCTTGACTGCCAAGGGAAATGAATGATGCCAGCATTATTTATTTCCAAGATTTCCTCTGTTGGATCATTTGAACCCACTTGTTAAGGACAAGACCCGAACCTACAGCAATATGCATTTGGCTTTTTGTGGGAGACCTTGAAGAGGCGCAGCGCCTGGCAGGAGCGAAACGGAGGGAATAAACGAGGAAGTTTTTGCAGGAAGGATTGCAGTGGCTCGTGTGCTCTTCGAAGCATCATCGTGAAGCTTGAACTGAAGCCTTCAGCAGAAATCTTCGGAATTTAACCAGCATGATGCAAACAGTGTGTATCGGTACCTTCCACTGATTCTGTCGGAGAAAATGGAAATGTGAAGTGCCCAGTGTCTGCACCTCTGGCAGGACTCAATGTTTACAAACCAACTCTTGAAATATTGGTTCTCAATTTGCCTTGGAGCATGATTGTGAAGGAACCACTAAGAATTCTGAAGATCAAACCTAGAACTGCAGCTCTTTCTCCCCCTCCCCCGGTTTGCCTTTTTTTCCTTCGGATGCCACCAAAGCCTCCCATTTGCTCTGGTTTATTTCGTGCACTGGAGACTGAGCATTTATCATAGAGTGCCGCCGAGCTTTCACTCCAGTGCTGTTTGGCAATGCAATTTTTTTTTAACTTTGGTTTTTAATTTGGGGCGGGCGGGGCAGAACCCCAGTGTCCTAGCTGTGTGATGATTCCGCGGTGAAGACATTGCATGTTGTCTTCACTACTGTACACTTGACCTGCACATGCAAGAAAACAAAAAAAGGTGGAATGTTTCAAACACCATAATCAGCTCAGGGTATTGCCAATCTGAAATAAAGTGGGATGGGCCAGTGTGTCCTTCAGAGCAAGGGTACTAAAGTCCCTCTCGCTGCAGGGAGTGAGAGGTATGTCGTGTGTGTGTGGATGTGTGTGTGGGGCACGCTCGTGCATGTGTGACTGTGCATGTGTTCTATTTATCCACGTGGCAAGGATCGGAGACGTCGGCTTTTATTTATTATTGTAGAATGTGACGTAGTGAGCAGCCACACGTGGGAGGGGAAGGGAGGTCGGCCGTGAGAGATGATGGCTCCAGACGCCAGATGCCTTAACTATGCACCAAGCTAAGTGACCAAACTTCTTGTTTTGATTTGAAAAAAAGTGCATTGTTTTCTCGTCCCTCCCTTTGACGAAACGTTCCCCTTCGACGGGCCTTTTGATGTGAACAGATGTTTTCTAGGACAAAAAAAAAAATCTAAGGACTAATTTTAAATTTAACAAACATTCCACTTTTGTAATTTGTTTTAAATTGTTTCATGTATAGTAAGCACAACTGTAATCTAGTTTTAAGAGAAACCGGTGCTTTCTTTTAGTTCAATTGTATTTCCCTTGTTACTGTAAAAGACTGTTTATTAATTATGTTTACAGTTTGTCGCAACAGCCATTTTCTTGGGAGAAAGCTTGAGTGTAAAGCCATTTGTAAAAGGCTTTGCCAGACTCATTTTAATATGTGCCTGTTGCTGTTCACTTTTGATGAATAAAACCTATCTTTTCACATTT EMBV3_27926 AGAAGCCACCGAGCTCGAAGGGCGGCCACAAGAAACAGAAAAACAAGGACAAGGAGTACT Gene GeneID:614412|NRXN3:NM_001081740:141_cdna Constitutive 0 NULL GeneID:614412 10 GENE NRXN3 NRXNIII neurexin 3 EMBV3_13381 ATCTGGTCAGGAATCTTCAGGGTGTCCGGAACTGCTGCGTGAAAGTTCTTATGCCTTGGC Gene BVT0102_122175 + 1 EMBV3_32663 GK000011.2:47295737-47302535 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09241 GAAAGTGGAGGGCTGTGTGCCAGGCTTTCCAGTGAGGCCGTCCTTTTACAGAACAAAACT Gene GeneID:514809|OTUD3:XM_002685731:457_cdna Constitutive 0 NULL GeneID:514809 2 GENE OTUD3 NULL OTU domain containing 3 EMBV3_01042 ACAGTGGTTCTTATGGACAGACCCAGAACAGTAGCTACGGCCAAGATCAGCCCTCCATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01496 GGGCAGCAGTTGTGTCGTATTCATATTTGCCTCCCTACATGTTAGGACAATATCTGACAC Gene GeneID:100140857|LOC100140857:XM_002692317:71_cdna Constitutive 1 NULL GeneID:100140857 13 GENE LOC100140857 NULL hypothetical protein LOC100140857 EMBV3_25829 TCCACATTTTAAGGAGGATCTGGGGAGCCTGGGAAAGCAAACCCACTTCTGGACAAGATC Gene GeneID:520189|LGR5:XM_002687166:101_cdna Constitutive 0 NULL GeneID:520189 5 GENE LGR5 NULL leucine-rich repeat-containing G protein-coupled receptor 5 EMBV3_43212 GGTGGTGAAATATGCACATACAAGTATTATATCCCAATGTTAAAACTTTCTGCCACAGTT Gene BVT0102_044457 - 1 EMBV3_08764 GK000023.2:33246915-33268311 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133284 TCONS_00133283 1 XLOC_081078 Coding TCONS_00133284 XLOC_081078 Coding Coding DCDC2 23:33102819-33252049 j TSS99584 6868 1 TCONS_00133284_5 304 0.0337798485730926 9 0.95403708394481 2.52910557984933e-06 3.53080763454229e-06 8.17757031481482e-06 1.54607184070759e-06 7.47417918954101e-06 0 3.28628736204859e-06 8.39976311297895e-13 6.86540026429062e-06 1.67599883534782e-05 3.57222551181042e-06 2.76143034197355e-13 0 0 6.22594531496854e-34 0.000731914495954262 0.00059164744784161 0.00308982037234653 0.000105429985406763 1.92390885870996e-23 4.23164897486821e-28 0.000504587443623357 6.44869294193307e-07 0.000491364090170305 5.44567819650921e-06 5.26369361793147e-25 3.30501433902911e-06 7.67617569650932e-05 3.58778592835631e-08 9.72925734376707e-05 XM_002697540.2 DCDC2 PREDICTED: Bos taurus doublecortin domain containing 2 (DCDC2), 0.0 5954 98.34 0.490390215492137 NM_016356.4 DCDC2 Homo sapiens doublecortin domain containing 2 (DCDC2), transcript 0.0 2367 76.49 0.459231217239371 TCONS_00133284_5 sp|Q9UHG0|DCDC2_HUMAN DCDC2_HUMAN Doublecortin domain-containing protein 2; 1e-165 474 81.13 0.986842105263158 1 coding 0 0 0 0 0.0178008429472429 0.863558769467711 0.0435563504929015 0.453121432363868 CGGGCTTGTCTGTTTCGCGGTCGTTTCAGGACGCGACCCCGCGCCGCGCGTGTGCTGTGAGGCCGCTGGGGCAGCCGCGGTGCCTCCCCCCGGAGAAGCGAGCCGCGCGGGAGTCCCGAGGGGAAGATGAGTCGCACCAGTGCCAGGTCCGGGCACCTGTCGCAGCCGGTCGTGAAGAGCGTGCTGGTGTACCGCAACGGGGACCCCTTCTTCACGGGCCGCCGTGTCGTCTTCCACGAGAAGAAGGTGTCCAGCTTTGACGTCTTCCTCAAGGAGGTGACGGGCGGCGTCCAGGCGCCCTTCGGAGCGGTTCGGAACATCTACACCCCGCGGACCGGGCACCGCATCTGGAGGCTAGACCAGATCCAGAGCGGGGGCAACTACGTGGCCGGGGGCCAGGAATCCTTCAAGAAACTCAAGTGAAACCAGTAACCCACAGCAGGATCAATGTGTCATCTCGCTTTAGAAAGCCACTTCTGGAACCCTGCACTATCTTCTTGATTGCAAATGGAGACCTCATAAACCCGGCTTCTCGACTCCTCATTCCTAGAAAAGCCTTGAATCAGTGGGATCATGTACTGCAGATGATCACAGAAAAGATAACTCTGAGGAGTGGGGCTGTCCACAGACTCTACACTTTAGAAGGAAAACTGGTTGAGAGTGGAGCAGAGCTGGAGAATGGGCAGTTTTATGTGGCTGTCGGCAGAGATAGGTTCAAGAAGTTGCCTTACAGTGAATTACTTTTCGACAAGTCGACGATGAGAAAGTCTTACGGTCAGAAAACTTCTTCACTACCTCCAATTGTAGGATCCAGAAAGTCTAAAGGCAGTGGAAATGATCGCCAGTCTAAGTCGACAGTTGGATCCAGTGACAACTCATCTCCTCAGCCCCCGAAGAGGAAAGGGAAAAAACATGCGAATTCGGAAAAACCCACGAAAGGGAAACAAAATGCCAAGTTAAAGAGTTCACCACAAACAATCCCAAACAGTGATGAAGGCGTTTTCAAAGCTGGAGAGGAGAGATCAGAAACGCGGGGGGCAGCTGAAGTCCAAGAAGATGAAGACACTCAAGTTGAGATTCCAGTGGACCAGAGGCCAGCAGAAATAGTAGATGAGGAAGAAGATAGAGAGAAGGAAAACAAGGAGGTGGAACAGAAGGACGACTTCTCAGGAATGAATGGTGAAGTTAAAGAGGAAGAAGGAGACCAGGAGGAGCCTGAAGCTGCAGAGCAAGCAGAGGAGATCCCAGATCACAGAGAGGAGCAGGCAGGTTCTGCTGCTCGTGTGAACGGAGGGACCGATGAAGAAAATGGCGAGGAACTGGCGCAGGTTAATAATGAGCTTCAAGAAGCGGTGGAGGAGGAAATAAAGTCTCAAGGAGCTGGCAGTGAACATGAAGAGGCTGACTTGGACCCTCAAAGACCACCAAAACCAGAAGTAAAAATCACTAGTCCACAAGAAAATGATGACAACGAACAAAACAAGGATAATTTGTCATAGCATGGATGATTTTTTAAAAGAGAGTATATTGAGTATAAGAAAAATGAAGGATTAAATACTTGAAGAAGAAGTATATAGCTATTGCTGAACATAATGTGGCAATGTGGTTGAATACTACCTACTGAAATTTAAAATTAGAGGCCTGACTAATGGGAAAGACTAGATAACTTTGAATAGCTACTAAAGGAGAGTGACTTCTTTTTATGAGCTGTGTTTTTAAAAGTCATGTAGAAAAATTAAGCGTAATAGCGGGGATTTTGCACGGGAAGACAGTTAGCCACTTGTCTTTGTAAAGATGAAAAAACACAGGACCACACCTGTTCTTGAGAAGTGAGATTATTGGATGGCAGCCGATGCTAAAGCCCTTATCTAAGAGGGCATAGAATTTAAAAAAATGATAATAGGAAAGCATGTACTATTTTTTTTAAAGCAATAAACTCTTGAATAAACTCATTGCAACTTAGTTTCAGAGATAATTTGAAGATGGCAATAGACTGAAATGTTTCTGTGTCCTGTTGACATTCCTTTCTTTCTTCCTCCTTAGCCAAAATCCACCTTAAAAGAACTAAAAGGATAATGCAAGGTATTCATTTTGGAAGGAGGAAGTATTCACTCAATGTATTCCTCGACAATATTGTCATGCCCCTCCCTTAAGTACTGCAGATTTTAATGACACACACTCAGGAAGGAATTACAGAAAGGAACGCCTAATTATATCACTGAGCCTGTCTGGGTGGTTTACAGATTCTGGTATCCTATGGATTTTAGCTGATCCAGTCTACCATTACCAATAATACTCCTCTCTTCATATTATTATATTAGAAAACTCAATATTGGGTATTCCAAAGATTGAATTTTCTCCAAACAGTTTTTTTTTTTAACAAAAAGAGCAAGGTTGTGTAGTAGGAAAAAAAACTTAGGCTATAAGATTTTGTCACACCTCAGTTTCTCTTGCTTTTTATGTTATTTTTTATTAGAACTGCCCTGTCGTATTTTTTCCCTTAGGGGTATCAGCAAATACTTCTTTTCATGGTCACTTATATTTAGACTTTTAAGGAGATTCTTTTCTCTATAATTTGAAGCTATAGGATAGAAATTGTTGAAAAAAGTTTAAAAAGTGTCATAATGAAACCAGTTCCTGATTACAGTTCTAGGGTTAATTAAATTAAAACAGATTGCCTCATCAGGTATATGTGGGGAAAAAAGGTCACGTTAGTTTTGAATTTTTAAGAGATGATGTAGTTCTTCCTTAAATATAGAAATAATATGTTTTCTCATATTAAAGAATATTTTTTGTTAGTTATGTAGAAATTTGCAGTTTTAACTTCTTATGCTTTCATCAAATTCATTATTAATGATGATTTTGAAAGGTTTACCGCCCCCCCCGTCCAGGTTTCATAACCAATCATTTGGAATTAAAGTTATATAAAGCGCTCAATAATACTATAGAAAACTGATATATTTTTCTTAAAAGCTATTTTAATATTTTCCATAAATAGGAAGTATATGCAGTGACTATAACAGTATTGGAAAGAGATACTGATATACAGGTATATTAATTTAGGAGGATGAATTATAAATGGGGTACTATATTTCTAATATAAACTCTAGATTGTTCTTTCTACTAGTAGGTTTATTTTTTTCAAGTGAGACAGTATAAAGCTTTACAGGTGATAGGCAATCATCTTAATAACCTTTATTGCTAGGGCAATAGACTACTATGTTTTTTATTGTTAAATTCCTACACTATTACTGGGTCTGGAGTTAATGATTTCAAATAGTTTATAAAAATAAAAGATTGCATATAAGAAATTATAAGTAATTATCAAGGTGATTCTTCTTTCTTTAATGAGGATTTTATCTGTCTCTTCCTTCTTCAATAAAGATATTGTCTCTCATTTTTTCCTGTTATTTGCTTCAACATTTTGGAGAAGGGAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCTATGGATAGAGGAGCCTGCCAGGCTACAGTCCATGGGGTTGCAAAGTAAGACATGACTGAACGACTAATCACACACACACACACACACATACACACTTAACATTTAGGTTTGGAGGAACTTTTTAAGAGTCATCTTAGTGAAGCACAATGTCACTTTAAATGAAACACAACTTTTGGTATTTAAATATACTTAAGAAAGTGATAGGCTACAATAACTGTGGCAGAAAGTTTTAACACTGGGATATAATACTTGTATGTGCATATTTCACCACCTATCTATAATTGTGACCTAACTTGAGGAATGAACAATCACTAATGACTTTAAAACACTTTGCAAGCATATGTTACTAAGAAAAAAAAAAGAAAAAAAATGTTGTCTTACCAAAGAAGAATCATTAACAGATGATTTCTGTAAACGGTCGTTTTGGAGATGACTTTAACACAAATGATGCAAATTAGTTCACCTCCCAAACGATAGTTTTCTTTGGGAATGGTGGCCTCCGTGGAAGATTAGCTCCACAAATTGAGACTCACTGACTGGTTTGGAGACCATTTATGTGAGTGAGCAGAAGAGATCTTGGTTAGGCTTCAGGTATTGTTTTATAAAGGGTTCTATGAAAAACCGACGGAGCTTTTATGTGGTGACCAGTCATAGAATGTTTTGATCTGTTACTTCTTGTGATAGTTTTCAGTTTTAATTTTATTTTTCATAGTTTTAATCAAATGCTTTTCTTAAATTTAATTGCATTTAACACACTTGTCAATAATGGGTTTGTTAGTTGAAATGGAACACTGGGAGTTACACAGTAAGAGTAAGGAAGATTTTTCAGTTCAGTTCAGTTGCAGTCATGTCCGACTCTTTGCCACCCCATGGACTGCAGCACGCCAGGCTTCCCTGTCCATCACCAACTTACTCGAACTCATGTCCATCCAGTTGAACTAAAGTCATTTTTCATGCAAAGGACAGTTTATCTGGTTTAGCTTCCATTTAAATAGCATTTGAGCATCCATGGATTTCTCATATAAAACAAGATACTCTGGCCATGAGATAACTTTTTACTCATTATATTTCTCTATGATCATAGGATGACTTTTTATTTAAGACATTTTTGGAGGGGTGGTATTAGAAAGCCAGACTCATAGGAAGAGATTAATACCCTCTTGTGCCTTCCATTTTATTCTGTGTTAATTCTTGTTGTCATCTGTAAATGTAGACCCATATAAATATAAATATATATATATATGTGTGTATATATATATATGACTTGGAGTCAGTTAGATCTCTCCGTAGGCTCACAAATGTGAAGCCATACTAATATGAACTTATGTTAACTCTTCTAGTTTACAGTTCATAAACCAACATCCCCCAAAATTTCACTGAATACCCTATCTTCTACCCAAAGGATAAAGCAAATTCACCCAGTTAAAATTGTGACCACTGAACAACAGGAAGTCGTCTTTATTTTGTTAACTGACTCTCCTAAAGGATCAGCTCTGTCCTTTCATTTTTTGCTCAACAAGGAGCCAAGGCAAAAATTTAGAAAGCAGATTAATTGCTAAGCAGAAAGCTTCACATCTGAAGTGTTGCCAATCTGAACAGAAATCGACCGCATAGATACACATAGACACATACCAGACACTCACACAGATGCACTCACACACTTTAAAATGTTGAAAAAGACTTCCTCAGGCACAGCATTAGTAATGCAACAAGGCTCTTGAGAGAAGCAATGGATATAAACTGTTAGGAAAGGCTAAGAAATGATGCATATCATGGTGCTTTAAAAGTTGGTTCCCAAAGACTATAGGATATTTTAAATTCTTCTCAAAATAAAAATCTACCAGCGTTTTAATGGAAAATTCTAGGGGAGGGTGAGATATGTATCTATATAACTTTATTTTCTCAAATTAACTACAGTACAGTTCTTCAGTCATCAGTCTTAAGTACCAAAAACTTTAGGTGCAGAATATGTCCTGCCAACACAGGATCTGTGAAAAGTCATTACTGCTTGTTAATGTGTGTATGATTTCCGTGAACATCTGGAGAGGACTCTGGCATCAAGTAGCCAAGTTCACTACAAATAGAATAAAAGTCTGACTTATTAATCTATTAGTTTATCTAATTTTCAAATTTAGTGCAGAAGATTTTTAGGTTCCTTGTATGAGTGATACATCCTGAAATGGAACAGTTTTTTTTTTTTTTTTTTTTTTAAGGTTAGTCTGCTTTTCTGAGGTGACGAGCATGTACAGTTCTTCATTATTGAATATCATTTTTGTAAATAGTGTAAGATTTTTGCTTTTCAGAAAATATCCCGGTATTTGGATGGGTCTGATTTTGTTCTTACTACATGAAATTTGTATATTTCTTACCATGAAGTCTAAGTGACTTGGATGGAGAACAAATATGTGCCCCCACATGTTGATGAGGAAGAAAAAGACTGTTTTTGAAGAGACATAATGTCCTGTAGGATATGGGGAATTAGGAAAGAATTAAAAAAATGTCTTGATAATAATAAAGCATTTATAAAATCAGGAGATGACTAATGCAGGTTCATTGACTTGAGCCAACAACGACTTAGCTTTAATCTATGAATGGGACCAAATGAGTTCTCTGTAGTTTCATCTGCTTAAACCATATATTTTAATTGAAGGTTTGAGTTATTGTCATAAATGTAATGGCATATGGGAAGAAGAAATGATAGTAGTCAATTTTAGAAGAAGATTGCAGAAAACCTATTTTTCTGCTTCAATATTTTTCCTTTGTCTTAAATCCTTAATATGTCCAAAGATAATGGGTGATTATTGAAGTTTTATGTAAAAATTAAGTTGAGCTCATCATTTTTGTATTATTTATGTTTAGAACTCCTCTTTGTAAGGAAAATTATTTATGTTTTGATCAAATTATGAGAATTTTAGGTTTTTATTTCTGTATCAGTGCTCACTCTAAAATATGTTTGCTGTATTTTTTCTCACTCTAAAATATAAGTTTGCTGTATTATTTTTAGCAAATCTGTGTTTTATATAATTAAAATGTGTTTGAATAGTTGTTTGTTTATAATGTTGTGTTGCTAATATTTCATGTATTAATTTGTATATGATATTTTTCACAAGCATAATAGTAACTTTTCATTTGAACCATGTGGAAATTCAGCACAGTAAAAGATACTTCTGTTTCTATTTGGCATAGGTATTAAACCTCATTTGTAAAGAAATTTTTTATAGCTTCATATACATGTTGTTTAGCTGATAAAAATTTGAGGAATTTTTTTTAAAAATTGTTTTTTTCTTTTATGAAATGATATTAGAGAAACACAGGTTCAGAATTTTTGCTACGATAAATAAACACATCTTTAAAACAGGGAAAGTTACTCACATTTTTGTAGCTAGAGCTATAG EMBV3_30279 GCTTATGCACCATTCAGACTTGTCAGAGTAGATGTGGGTTTATGACTGCCAAGTTTGCCC Gene GeneID:532996|WTAP:NM_001113254:22_cdna Constitutive 0 NULL GeneID:532996 9 GENE WTAP MGC137402 Wilms tumor 1 associated protein EMBV3_29843 GAAAGGCTACACATCGTCAGCTCATGTTCCAGAATAGCACATCCAGGTAAATTGATTAGG Gene GeneID:514230|L2HGDH:NM_001101090:58_cdna UTR3_Alt 2 NULL GeneID:514230 10 GENE L2HGDH NULL L-2-hydroxyglutarate dehydrogenase EMBV3_05188 TCCAACACTGTGCCCTGGTGGAGAAAGCACTGACCTGTCCTGCCCCCCATGTCTCCCTCT Gene BVT0102_120788 + 0 NULL GK000021.2:22204118-22206307 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22346 GTTCCTCCTTTAGCGAGCTTCGATAGAACGGGTCCCATGCAGCCTGAGTTATGGAAAGCA Gene BVT0102_033485 + 0 NULL GK000018.2:60077392-60121919 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013074 TCONS_00087337 TCONS_00136030 3 XLOC_007989 XLOC_052448 XLOC_082249 Coding TCONS_00013074 XLOC_007989 Coding Coding ACIN1 10:21597198-21614390 j TSS9756 6690 1 TCONS_00013074_1 169 0.558445440956652 6 0.611191902739806 0 3.31164765750078e-05 3.67055134589482e-07 0 0 0 2.18221443952405e-06 9.04222492354885e-07 2.49506195907391e-05 0.000166108023124528 0.000161898132846752 3.85388156797419e-05 2.23858199278591e-05 3.53712095749166e-05 4.84466259899749e-05 0.0175405244886943 0.00815200489444215 0.0158138218987052 0 8.36860175910622e-07 1.85132281911715e-05 0.00465821436840327 0.00425148696603939 0.00681467411087809 1.45747604916891e-06 4.00020658359659e-06 1.16246133343556e-06 0.000704791948956776 0.000170835513086571 0.000557952672845172 XR_238500.1 LOC788150 PREDICTED: Bos taurus zinc finger protein 480-like (LOC788150), 0.0 1994 86.66 0.238266068759342 XM_005267415.1 ACIN1 PREDICTED: Homo sapiens apoptotic chromatin condensation inducer 1 (ACIN1), transcript variant X1, mRNA. 0.0 829 97.74 0.0726457399103139 TCONS_00013074_1 sp|Q9UKV3|ACINU_HUMAN ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus; 9e-83 268 96.93 0.958579881656805 1 coding 0 0 0 0 -0.354756730332637 0.0292222273198827 -0.000476812614915501 0.991736035152748 ATCCGAAGATGCCCGAAGCCGTCGGGACGGACCCGAGTACCTCACGCAAGATGGCGGAGCTGGAGGAGGTGACTCTGGACGGGAAGCCTCTTCAGGCGCTGCGGGTGACCGACCTGAAGGCCGCACTGGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGAGTGCCCTGGTCAAGCGGCTCAAAGGGGCTCTAATGCTAGAAAATTTACAAAAACACTCAACCCCGCATGCTGCATTCCAGCCAAATTCCCAGATTGGCGAGGAAATGAGCCAGAACAGTTTCATAAAGCAGTATCTGGAAAAGCAGCAGGAGCTGCTTAGGCAGCGTTTGGAACGTGAAGCTCGAGAAGCTGCAGAACTTGAAGAAGCTTCAGCTGAGTCGGAGGACGAGATGATCCATCCCGAGAGAGTGGCTTCCCTGCTGCCTCCTGACTTTCAGAGCAGCCTGGAGAGACCAGAGCTGGAGCTCAGCAGACATTCACCCATAAGAGCTGCGGAGACATTTTTGGACAGCTGATCGACAAACGAGGCCGTATGCACTTGTTTTGACAAGGCAACAGCAGAAACCATAACTGATGCAGTTATGGCAATCAAAGCTGTTATTCCCACAACCAGAGCTGCAATGAATTGCTTAGGTCGAGAAATTAAATTAAGTTCATATAAAACTTTCAGTGCATAATCTTCAAACCATTGTCCCTCTAATTTTACAGGAACCATCAAATATGGTGGTTGCTTTACAATCATCACAGCCTTATAATTATAATCATTCCCATCAACACAATTCTATATAAAACAATTCACACATATAACATTGTAAACAGTTTCTTCTTCAGAAACTTCCAAATCACTCTGATTTCTGGCCAACAAAAAGGCATAGGGAGAATGCATGCAGGCCCGTACAATATATCTTTGTTCATTTAAAGGTCTATGTAAAATCACAGGTGCCATAGCAGCCAATACTTTCCATAACTCAGGCTGCATGGGACCCGTTCCATCGAAGCTCACTAAAGGAGGAACCCATCCATTAGCATGCCACCTAGTAATTACTAAAGGCATAGGGAGAAATGAATTATTCCATGTGGACCTATAAGGTTCTACATAAATCAAGCCCCATCGTTGATTCAAAAGATTGGGGTACCCTCATTTGGTCAGAAAATGTCTGGTGGCAGCAATGGGAATAGATAACTTTATGGCGTACATGCATTCTTTCCAACTAGGAAAGCCAGAAATTCTGCTTATGCTTTCCCAGGCCTGTAGTCCTTGTTCATCAGAGTCTGAAGTTGGGAGTGCACAACTCGGATAGTCCTTTAAATGAGGGGCTGCTTTTTAAAGGCATCAAATAGTCTTTCTTGCGCCCCTGGCATCAGCAGCTGTAAAGACCAAAAGTCTCTCTTGCCATCGCTTCTTGGAGAATCAGTAAGCATGCCTTTCAAGGAAGTGCTAACGCATCCATTCAAAACTGGAGCTGCTTCTTGTAGAGAGGAAGGTATGGCAAAGCAAATAGGTGGATAAATGGACGCGCCCGAAAAATTGAAGGGAGTGCTGACCACTGTTTTAACATTATTAGGATAGATAGAAGCCCCGCCCAAAAGAAGAGTATCATTAACAAAAACACATTCATTCATCCAATCAGTAGGCTGGGAAGAAGGTGGATTAGGCAAATGAGCCCAATGAACTTTTTCTGTGCTGGAGGGCCTCAGCTGACAAGCTAACACAGCAAGCATAACCACAAACATTACCATAGGAGTGGCCTCATATGTCCCCCTTTCTATTAATTCTTCAGCCCGCTGAGCGAGATGTTTTAGCTGGCCCCAAGTTGGTACAGTGCTGGAGGTGATTGTTTAAGTACAATAACTGTGACGAGGTGGGGCAGAATATGGTTGAACTCAATCAGCATGTCTCTCCTGAAGCGCCAGGTGCCTGAAGCGATGTACTAGCAGTGAAGCCTCAGGCAAAGGGTCACTCGCCCTTTGGCGTTTCCTTGGCTCCCTCAGGTCTGGACTCTACGAGCTTCTGGTCTCTCCATCTTTCCTCGGTTCCGGACTCCAGGACCCCAGGGATTTTAGTAACCTCAGGGGTCCAAACAGTAGAAGTGGAATCCTGTGGAAACACAAAAGCATACCCTCTCCCACAAGTTAGCAGTATATCTGGCCTTCTCCATTCTCCTGTAAGGAGGTCTTTCAACTTAACCAGAGGCCAAGTCGTAGCCCCTTCAGGAGTCCAGTGTCTCGTCATTGCAGTCTGCCCCTGTGTGTCCACGTTTAAATGATTAATTACAAACAAAGCATAGTGTAAAACATGATGCGGAGAGGAATATTTAAATTCTCCCTGTCTTAATTTAGCTATCTGACTTTTTAAAGTCTGGTGCACCCTTTCCACTATGGCTTGGCTTTGGGGATTATAAAGTATTCCGGTTGAATGTAGTATGGAAAATTGTTGACAAATCTCTTAAAAGTGGCAGAATTATAAGCTGGGGCATTATCTGTTTTTATCTGTTCGGGGAGTCTTATTTGGGAAAAGCTTTGAAACAAGTGCTGAATTACATCTCTTGTTGCTTCACCTGATCTAGCAGAGGCTATAATAACACGAAAAAAGGTATCCACAGTAACATGCACTAAGGACAGTTTTCCAAAGGCCGCGATATGAGTTACATCCATTTGCCAGAGAGCATTAGGCCTAAGGCCTCTGGGATTTACTCCTAATGGTGGAGATGGATTAAATGTTGGGCAATTTGGACATAACTATTTGTCTAGCTGCTTCCCTAGGGATATGAAATTCGTACCTTAAACCAGCTGCATTTTGATGATGAATTTTGTGAGAATTTTTGGCCTTGTCAATCTTGTCATGTAAGTTTAAAGCAATGACTTTAGTTAATGCATCTGCCAAAGCACTTCCTTCATGCAAAGGGCCAGGCAAGCCGGAATGGGCTCTAATATGTCCCACAAAATATTTCTTATCTCTATGCTTAATCTCCTTCTGTAAATCAAATAACAGGGAGAATATAGTAATCTCATTTTCTAGAATATTAGTAGTCTCAGTATGAGGAAATAACCCTACAGTATATCGGGAGTCAGTCAAAAGATTGAAGGCGTGGTTTCTTAAATGTTGAAAAGCCCAAATAACCGCCCTCAACTCAGCTCTCTGGGCCGATGTCTCTTCAGTTACCTGAACATGGGATTTTCCATCAATAATTGTGACTGCTTAAACATTAGAGGAACCATCTGTGAAAACTAAAATTGCCCTTTCCAAAGGTTGAATAGAAAATTTCTTCGGAAAAAATCACTGGATGTGTTTTCAAAAAATGCAGTAGGGGGCTTGAGGGCAAATGAAACAAAATTTGACCCCTGAAATCTATCAGGGTAACTTGCCAATCATTACTATTTTGTAAAAGAAATTGCAGTTGATCCTTATTGAATGGAATCACTATATTTGCTACTTCTTTTTCAAAAAGTTCCACACTTCTTTTTCTACCTTTTATAATTAATTGTGCTACCAAGCTAGGATAAGATAAAATTATTTTTCTTGGGGTCACTGGTATATGGAGCCATTCCAATGGGCCTTCTTGCCACAAGCATCCTGTAGGTGTATGCTCTGTGGCGAGAATAATTAAATCTCATCCTCTGGTAATATTAATCCTAATTAACTGATCATTTAAAGCCTCATCCACTTTAACAAGAGCCGACTCTGCCTCACTAGTCAACTTTCTCTTAGAACTGGGATTAGGATCGCTTTTTAAGCAATCAAACAGAGGCTTTAAATCTGCAGTGGTCAGTTTTAAATGTGGGTGTATCCAATTAATATTTCCTAATAATTTCTGGAAATCATTTAAAGTTAGTAAAGGATTTCTCCGAATGACTCATGGTATGGGTATTTAATACCCTCCCTAAATAAGAAAAAGGATTTACTTGCATCTTATCTGGCACTATCTTTAAACCCCAGCTTTCCAAGGCCTCAATCAATTCAGATAAAATTTGTTGCAACAAGGCTCTATCCTTATGAGCTGCCAAAATATCATCCATATAATGTGTCACATATAGATCTTTATACTTTGTTCTAGCATTTTGTAGAGCTTGGTCTACAAAATTCTGACACAAGGTAGGGCTATTTTTCATTCCCTGAGGCAAAACCATCCGTTGAAACCTCCTGTAGGGCTGTTTAAAATTAGCTGAAGGGAGACTGAAACCAAACCGTTTATAATCTTGATCAGCCAGGGGAATGGCAAAGAAACAGTCCTGTAGACCTGTAACTATCACACTATACTGAGAAGGCACAGCCACTGGGGAAGGGAGGCCCGGCTGGAGGGCCCCCATGTCTTCCATAGTTGGGTTTATAGCTCTCAAATCTTGTAACAATCTCCATTTTCCTGATGTTTTCTTAATAACAAAAATAGGAGTATTCAGGGGCTATTAGAAGGCTCTATATGGCCGGCTGCCAGTTGTTCCATAACTAAATCCTCAGCTGCCTGTAACTTTTCAGCTGTTAATGGCCATTGCTCCACCCATACCGAGTCATCAGATTTCCAGGTAATAGGGTCGGCAGCAAGAGCAACAGGCCCTAGGATAAATTTGAATATCCCAGACCTTCTGTATTTTTGTTAAGAACCGTCTCTAATGGAGAAACAATTTCCTGCTGATCTTTACCAAGCCCTTTATCAGGATTATAGCTCATTTTCAGCATTTGATTAGTAACCTTTTCATCTGGGCTATATAAAAGCATTCCCATCTGAGATAATATATCTCTCCCCCATAAAGAAAAAGGTAGTGAAGGAACCACATATGGACAAAGTGCTTTATGCCCCCTTCTCATCTGACCATGTCAAAATTTGTGAGCCCTTAGCAACCGAGGGCACTGACCCTATTCCTACCAGGCCGGCACTGGTCAAGCGTGTCGGCCAGGATGAGGGACAGTCTTTTCCAGCAATGCAAGAGACATCTGCTCCAGTATCTAACAGCCCTGACATTTTATTTCCTTGAATTAAAAGATCTTTTAAAGGCCTAGAAGCTGTAGTTTCCTGCACCCAAAAAGTTAGATCACTAGATCCAAATCCTCTGGGGCCCCTAGCTTGAGAAGTCAAGGTTTTTCCTGTCTGATAATAAGGTGAAAGCAAAAGCTGTGCTATTCTTTGACCTTAATTAATTTGCACAGTTTTAGTAGGTGGCGAGATCAAAACTTTAATTTCCCCAGTATAATCAGAATCTACCACACTAGGCACCACCGAAGTTCCTTGAAAAGAAAGCAAGCTACGCCCCAGCACAAGTCCTACAATGCCCTCAGGTAGGGGGCCAGCCACTCAATGTCAGGGGTTAATATTGTTGCTGTGGTGGAACTGAGGTCCAGTCCTGCGCTACCTGGGGTTGATTGGCACAACTTGTTGTCCCTGCTTGGCGGGACATTGCTGGCAAAAATGCCCCATTTGGCCACAAGAGAAACATTTTTTATTTGTAGAATCGTTTCCATTACGATTAATTTTTTTTTTAAGCCTGGGTGAGGCCCCCTGAGGAGGTTTTCTCCAAGGAGCAGGCTCTGTATATTGTGCATGCATCTGCTTTAAAAGCTCCTTTGTTTCAAAAAAAACTCTATCTTTCTCAGCCTTAGGTAATACTCTGGGAGGCTTTGGAGGCAAAGTGGGGAACTCCTGGGCCCTGGGAGGCACAAGTGGAGGTGGCGGTAGTCACCTTAAATCAGTTGCGTAGAGGAAGAAGGGGCTCGCCAGGGCACCGGCCGCAGCGTCCTGTAAGCCCTCTCCTTCCTCGGGAGGCAGAGCACAGTCTCCCTCCTTTACTTCATCAATGGCAGAAAACATGATCTGCACAGAAGGTGGAGACCCACCACCATCCACCACTATAGCCTCCCCCATAGACTATCTTAACAGCCTCATGACGAGGGTCCAGGACATTTCTAATCATATTCCACAGAGCAAAACCATCTACGGGAACCTTTTCTGGCCTATGCAAAGTATAAAACAAATGTAGAAATTTAGACGGTCTTCCTGTGCTTGCTTTAACACCTCTATGGGCTAACATATGAAATAATATTTCAATAAACATTTGTCTATTCTTAGATGCAGAGAAACCCATTCTTCTAAGACTATACTTTCAGGGATCATTTCTATAGTTCGTTACTAGAGAAGTTTCTCTGATCGTGTAGAGCACCAAGATTAGCAAAGGCCTCAAAAAAAAAAAAAAAGAAACCCATTCTTCTAGAGAATATTCTTACTGATTCTATAGCCTCCTCACCCTGCCTAAACTGCAAAGGGGTGCCGGCCACCCACAGGTACAGTCCTAACCGTCCCGCGTTACATTCCCAGAATCACTTACTCTTCAGTGTCCCCTGTTCTGGGCGCCACTGGCCGGAGTCCAACTCCAGCAACCAGGGATTCAACCTGAAGAGATGGACGGTGTCGGCGAGAGAAATGAGGCAGCCTCTCAGTTTTCTATGGACTGCCTGTTTATTCCAAGTTTAAGATTCTCTTTTATACTTTTACAAAAACATTAGGCCAGAGGTTTGACATTTTCAGTTCCCCCTCTCCCAGATTTATCATCTCCATAAATCACTGTTGCTCTTCAAACAGAGTTCCTGCTTCAATGATTCTCTGGGAATCAGCCTTATCTATTATCTGCCTCTTGTAAGTGTCCCATAGTTAACTTGTGATTACATTGTAACTCATGCTACATTCTTCAGTTTACTAC EMBV3_04658 AGAGGTGGAATGTTACGACTCTCTCACGGCCTGCCTCCTGCAGTCGGAGCTGGTAAACTA Gene GeneID:100125944|TTC9B:NM_001105507:477_cdna Constitutive 0 NULL GeneID:100125944 18 GENE TTC9B MGC142414 tetratricopeptide repeat domain 9B EMBV3_28169 GATTCACAGTCACTTTCCAAGCTCAATAGAAGCAAATTGTAAAGATAGCAACAACCACTG Gene BVT0102_366371 + 0 NULL GK000017.2:44372843-44377628 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075275 TCONS_00075276 TCONS_00075279 TCONS_00075280 TCONS_00075277 1 XLOC_046538 Coding TCONS_00075277 XLOC_046538 Coding Coding CTSO 17:44348247-44374247 = TSS56806 2871 1 TCONS_00075277_3 313 0.0651340996168582 8 0.889880380014616 0.00126044504785769 0.000828488863504741 0.00133747435602544 0.000768812126926129 0.000671414612372272 0.000222077538839192 0.000695053430580609 0.00110835237657899 0.00149367985886171 0.000244748910781103 4.2424803845442e-38 3.3624848304421e-05 0.000297816426589276 0.000465316742707254 0.000973612512779942 0.00142927648893629 1.23253005333349e-09 0.000445637792827492 0.0026875125555345 0.00153072960474226 0.000598034036224781 0.000390273609346697 7.34673465435575e-05 0.00121452343716704 0.00143718528798066 0.00208549191074423 0.00116686644942372 6.01909943772119e-05 9.65260719501419e-30 0.000192311572634003 XM_002694425.3 CTSO PREDICTED: Bos taurus cathepsin O (CTSO), mRNA. 0.0 5178 100.00 0.999651689306862 NM_001334.2 CTSO Homo sapiens cathepsin O (CTSO), mRNA. 0.0 1079 75.88 0.544757924068269 TCONS_00075277_3 sp|P43234|CATO_HUMAN CATO_HUMAN Cathepsin O; 4e-177 498 80.81 0.936102236421725 2 coding 0 0 0 0 -0.318876875409273 0.215114354570409 -0.045207408665906 0.363176087817547 GCTCGAAACCGAAGAGGAAGCGCGGGATGGAGCTGCGGCGCCTCTGGCTGCTCTGCTGCTGCTGCTGCTTCTACTGCTGGGGCTCCTGCGCCGCGCTGACCCCGCCGTTCGGCCGCCACCCCGCCGCCGCCTTCCGGGAAAGTCTTAATAGACAGCGATACTTGAATTCTTTATTTCCTTATGAAAACTCCACTGCCGTCTATGGAATAAACCAGTTTTCATATTTGTTTCCTGAAGAGTTTAAAGCTATTTATTTAAGAAGCAGCCCTTCCAGGTTTCCCCGATTTCCGGCAGAAGAGTACACATCCATCTCCAACCTGTCTTTGCCGTTAAGATTTGACTGGAGGGATAAGCACGTCGTCACCCAAGTGAGAAACCAGAAGACGTGTGGTGGATGCTGGGCTTTCAGCGTGGTGGGTGCAGTGGAGTCTGTGTGTGCGATAAAAGGGCAGCCCTTGGAGGTGCTGAGTGTTCAGCAGGTGATAGACTGTTCTTATAGCAACTACGGCTGCAACGGAGGATCCCCGCTCAGCGCTTTGTACTGGCTCAATAAGCTGCAAGTCAAGCTGGTGAGAGATTCGGAATACCCATTTCAAGCCCAGAATGGCCTCTGCCGTTACTTTTCCGACTCACATTCTGGATCTTCAATCAAAGGTTATTCTGCGTATGACTTCAGTGGCCAAGAAGACAAAATGGCAGAAGCACTTTTGGCCTTGGGACCTCTGATAGTGGTGGTAGATGCCATGAGCTGGCAAGACTACCTGGGAGGCATTATACAGCACCACTGCTCCAGTGGAGAAGCAAATCACGCCGTCCTTGTAACGGGCTTTGATAAAACAGGAAGTATCCCATACTGGATTGTACGGAACTCCTGGGGAACTTCATGGGGCATCGATGGCTATGTCCGTGTGAAAATGGGAGGAAATGTTTGTGGTATTGCAGATTCTGTTTCGGCTGTATTCGTGTAACATGTTTGCCAGATTGAGAGTCGAATACGAAACTGAAGGTTCATAATGAGATCTGACACTTCATTCTTGGCGTTTCATCATTATGCTTTTGCAACTTCCCACAAAGACAGGTTCTAGGACCTGGTCATGTTGAAACTAAGCTATGAAAATTCTCTTAGAGAGAGGTGAAGTGCCCACGCCAGAAGGAAGAAGACCAGCACGAAGGCCTGGGAGGCAGACTGGGAACAGTTTCCTCCTGGGAGGAAGGTCAGATTAGGAAGTGTTTTAGGTCTCTTCATTCTGAAGCAGCTATTATCTGGTTTTGTTTGATTGTTGTTTCTATTTGTTGTTTGTTTATTTTTAATGACATATTTCAAACAGGATTAAAGAGAGGATAAACAGTCCTTTTCCTTTCTGGGATACAGTCACCGGCCTCAGCTGCCCCTACACACAAGAACAGCCCAACTAGAACTGCGTGTGCCTGTCACATGGGTGTTCCCAGCCTCCCAGAGGGAATTTCATAAGAGTTGTGAAATGCCAGTTGCTTTACCCCCCAAAATGGTGCTCACCCCTTGACCTGTGCAGAGGTCATGTAGAAAGAACTGAAAAGACAATCACTTTTTAAGACAAACAATTGATTGAAACTAAGTAACCCATATGGCAACCATGTAATGGGAAAACCTCAAGTAGCCTTGCATGAGAGACAAATTGTTATTTGTGAATTTTCACTATCAGTAGGATTTCAGTGCATTTTTTTTTTTAATGTGGACCATTTTTAAAGTCTTCATTGAGTTTGTTACAATATTATTTCTGTTTTATGTTTTGGTTTTTTGGCCTCATGGCATGCAGAACCGTAGCTCTGGCACCAGGGGTCAAACCTGAAGCCCCTGCTTTGGGAACACCAAGTCTCAACCACAGGACCACCAGGGACGTCCCTCCGGCACATTTGATTTCCTCCTTGGTTCTCCCTGGATTGAGGAGCAGTGGGCCTGCCTATATTTTCTCACATTTTCTCTTACTCTCAACTGTGAAACTTTAAATCTTCCTCATGGTCTGGCTTCCCTGGCTAAAGAAGTCCCATTTTTTACCTTCTATTTCTATTTTATAACCATTCATTTGACTCCAGTTGTCTCTAAGGCTTTGTCCATGTCAGGACCTCACCTGTCTGCTCCTTTGTCGTGTGGAGGCACCACTCCTTTCAAAATTCAGTCTCAGTAATTTGAGACTGTATTAGCCAAAATGTGACTTCCCCAGCCCGTGGTTTTCCAGTTTTCTGCTTGTTTTTCGCAGACTCCCATCCTAGCCACTTTTCTGTGCATCCTTTGGGCTTTCAGCTTGTCCCTGGTTCTTGAGGTCATCTCCTCTCTTGCTAAGTCAGTGTGGCTGTATGAGAACCGCAGAGCATGAGAGCTGCTCTTCTGACTGAATATAAGTACAATCGTATCATAGGAGTTAATACAGCTGCATCAAATACTACATATTTAAGCATTTCCTCTCTAAGATTCACAGTCACTTTCCAAGCTCAATAGAAGCAAATTGTAAAGGTAGCAACAACCACTGAAAACAATTGAGACATCCTCTTTTTTTCTCTCATGGTTGGCCTTTATCAGTCTCCTTATTAGAAAAAGAAAATCCACAACAGGACACTATTTCTTTTCCTTACACCAGCCAGAAGCAATTTCAAATGAATATATGTTGACTCAGGTTTAGAAATGCTTCAGAATGAAAATTGATATTTTATTTGATTAATATTGTAATGTACCAGAAAGGAATATGTCTTGATTGTCCTAGTTTGTGATGATGTACTAATTCTTGTAAAATGTAAATGATTTTCTGATACTCTTTTACAAATGATAGTTTTAATTACTGAATGATGCATTCTTTTCAGCTCTTGTGGATTTTTATAAAATTAATAATGAAACAA EMBV3_12169 TTCTTCCCTGGAGTGGCTTATGCCCAATCGCTGGTTAGCGAGTCCTGTCCTCGGCTCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19362 AACTGGCGCAGGCCACCGGCCTCACTCCCACACAAGTAGGCAACTGGTTTAAGAACCGGA Gene GeneID:616756|SIX3:XM_002691302:412_cdna UTR3_Alt 2 NULL GeneID:616756 11 GENE SIX3 NULL SIX homeobox 3 EMBV3_36708 TTACAGGCATGGTGGTGCTCTACAGCGCTGTGGTTCCTGGGCTTCTCAGTCTTCCTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36426 GTGGTGTTGAAACAGATGATGAACCCATGGACTTGGATGATGGATCAGAGAAGAAGAGGC Gene GeneID:515736|LOC515736:NM_001034509:119_cdna Constitutive 0 NULL GeneID:515736 22 GENE LOC515736 NULL caspase-15 EMBV3_36813 GCAGTCCAGGGAACAAAGAGCCGTTTCGAACACAGGGATCATCACCCTTTCCTGCTTGAT Gene GeneID:100295084|LOC100295084:XM_002698112:369_cdna Constitutive 0 NULL GeneID:100295084 25 GENE LOC100295084 NULL hypothetical protein LOC100295084 EMBV3_31854 CATGCCGTTCAGGGACATGATGATATAAGTGCAAGACACCAAGGCCGACTACCAGAAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17652 CCTTGAACACAGGGATGGCCAGCTCACCCTAACTCCAATGGGAAGAAAGATGGCGGCTTT Gene GeneID:528151|DHX33:NM_001034563:129_cdna UTR3_Alt 2 NULL GeneID:528151 19 GENE DHX33 MGC127095 DEAH (Asp-Glu-Ala-His) box polypeptide 33 EMBV3_20503 GAAAGCGGATCTCCCCGCCGGCTGAGGCAGGTTGTTTTGTGGAAATGAAGGTTTGAGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02316 GCTCTGGCTTGGGAGAAAACCAGGAGCATGGATGAACAGTGGAGGATGGGGAAAATTCAG Gene GeneID:781765|EGFL6:XM_002700407:101_cdna Constitutive 0 NULL GeneID:781765 X GENE EGFL6 NULL EGF-like-domain, multiple 6 EMBV3_07423 AAGATGCACTGCATTTGGCACAAACAAATGATTTTGACCGACTACAGTTTTGTTCCAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33029 ATCCCAGACCACGGAGAAGTCCAGCTCGGTGTCACCATACTCATCACCTTCATAGGAATA Gene BVT0102_046679 + 1 EMBV3_37561 GK000030.2:40443783-40458246 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246884 TCONS_00246885 1 XLOC_151147 Coding TCONS_00246884 XLOC_151147 Coding Coding - X:40446342-40450051 - TSS184998 2058 1 TCONS_00246884_6 676 14 0.448759439050701 0.000238859160397263 0 6.01314460221246e-05 1.61401670511259e-05 0 8.99430088664483e-05 9.72169412716933e-12 9.1465318365941e-12 2.06424679449508e-05 4.41626258392473e-05 0 2.35280155574995e-06 3.76090955967651e-06 6.06754740069593e-06 7.42099071470749e-12 0.000564679001225326 0 0 6.94382108599231e-05 0.000366909438373768 8.18315694915591e-05 0 4.45774138401557e-05 4.88766236959191e-05 0.000464586650014428 3.4233818360298e-05 0.00044128528458207 0 0 3.8998557006307e-12 XM_003582046.2 LOC100851717 PREDICTED: Bos taurus plexin-A1-like (LOC100851717), mRNA. 4e-174 616 67.30 0.999514091350826 XM_005274706.1 PLXNA3 PREDICTED: Homo sapiens plexin A3 (PLXNA3), transcript variant X2, 0.0 2585 87.85 0.999514091350826 TCONS_00246884_6 sp|P70208|PLXA3_MOUSE PLXA3_MOUSE Plexin-A3; 0.0 1300 92.60 0.998520710059172 2 coding 0 0 0 0 0.00803086190614924 0.93995408293944 0.0158470825705491 0.770458022274345 TTTTACAACTGCAGTGTCCTCCAGTCGTGCATGTCCTGCGTCAGCAGCCCTTACCCCTGCCAGTGGTGTAAGTACCGCCACGTGTGTACCAGCCAGCCCCATGACTGTTCCTTCCAGGAAGGCAGGGTGCGCAACCCTGAGGGCTGCCCTGAGATCCTGCCCAGCGGGGACCTCCTGATCCCGGTAGGCGTTGTGCAGCCCCTCACCCTGCGGGCCAAGAACCTGCCACAGCCTCAGTCAGGGCAGAAGAACTACGAGTGCGTGGTCCGGGTTCAGGGCCGGCATCAGCGGGTGCCTGCCGTGCGCTTCAACAGCAGCAGCGTGCAGTGTCAGAACGCCTCGTATTCCTATGAAGGTGATGAGTATGGTGACACCGAGCTGGACTTCTCCGTGGTCTGGGATGGCGATTTCCCCATCGACAAGCCTGCTACCTTCCGAGCCCTCTTGTACAAGTGCTGGGCGCAGCGGCCCAGCTGTGGCCTCTGCCTCAAGGCTGACCCCCGCTTCAACTGTGGCTGGTGCATCTCGGAGCACAGGTGCCAGCTGCGGGCCCACTGCCCAGCCCCCAAGACAAACTGGATGCACCCGAACCAGAAGGGCGCTCGCTGCAGCCATCCTCGCATTGCCCAGATCCACCCAGTCATGGGGCCCAAGGAGGGGGGCACCTGGATCACCATCGTGGGTGAGAACCTGGGCCTCACCTCCCGAGAGGTGGGCCTGCGGGTGGCTGGCGTGCGCTGCAACTCCATCCCCGCTGAGTATATCAGTGCTGAGAGGATCGTCTGTGAGATGGAAGAGTCACTGGTACCCAGCCCTCCACCAGGGCCTGCAGAGCTCTGTGTCGGCGACTGTTCGGCTGACTTCCGCACGCAGTCTGAGCAGCTCTACACCTTTGTGACGCCTACGTTTGACCGTGTGAGTCCCAGTCGGGGCCCGGCCTCCGGGGGCACGAGGCTCACCATCTCTGGAAGGGCTCTGGACGCCGGCAGCAGGGTCATGGTGACCGTGAGAGATGGCGAGTGCCAGTTCGTCAGGAGGGATGCTGAAGCCATCGTGTGCATCTCGCCTGTCTCCACCCTGGGCCCGAGCCAAGCCCCCATCATGCTGGCCATTGACCGCGCGAACATCTCCAGTCCTGGTGTTGTCTACACTTACACCCAGGACCCCACTGTCACACGCCTCGAGCCCATGTGGAGCATCATCAATGGAAGCACTGCCATTACCGTGAGTGGGACCCACTTGCTGACGGTCCAGGAGCCCCGGGTCCGGGCGAAGTACCGAGGCATTGAGACCACCAATACATGCCAGGTGATCAATGACACTGCCATGCTGTGTAAAGCCCCTGGCATCTTCCTGGGGCAGCCCCAGCCACAGGCCCAGGGCGAGCACCCAGATGAGTTTGGCTTCCTGCTGGACCACGTGCAGACTGCCCGCTCCCTCAACCGGTCCTCCTTCACCTACTACCCTGACCCCAGCTTTGAGCCTCTTGGGCCCTCTGGGGTCCTGGACATCAAACCAGGCTCCCACGTAGTGCTAAAGGGCAAGAATCTGATCCCCGTGGCAGCTGGCAGCTCCCGCCTCAACTACACGGTACTGATAGGGGGCCAGCCATGCGCGCTAACCGTCTCCGACACGCAACTTCTCTGCGACTCCCCCAGCCAGACGGGCCGGCAGCCTGTCATGGTGCTGGTGGGTGGTCTGGAGTTCTGGCTGGGCACCCTGCACATCACAGCCGAGCGTGCCCTGACCCTGCCAGCCGTGGTGGGGCTGGCGGTAGGGGGCAGCCTCCTGCTGCTGGCCATCACTGCCGTGTTGGTTGCCTACAAACGTAAGACTCAGGATGCCGACCGCACGCTTAAGCGGCTCCAGTTCCAGATGGACAATTTGGAGTCCCGGGTGGCCCTGGAGTGCAAGGAAGCCTTCGCTGAGCTGCAGACAGATATCAATGAGTTGACGAACCACATGGACGGCGTGCAGATCCCTTTCCTAGACTACCGGACCTATGCTGTGCGAGTGCTCTTCCCAGGGATCGAGGCCCACCCAGTGCTTAAGGAGCTG TCONS_00246882 s 5' 2357 TCONS_00246882 s 5' 2496 EMBV3_04367 CCTTCACAAAGAAAAGTACAGTCTCGGTTTTCACTGAGTGCTGGGAAAAGGAGCCCTCAG Gene GeneID:281802|GRK7:NM_174332:9_cdna Constitutive 0 NULL GeneID:281802 1 GENE GRK7 GPRK7 G protein-coupled receptor kinase 7 EMBV3_16542 GCACCCCTGCGTGCTCCAACATGGATGAACCTTGAGACCAGTGTGTTAAATAAGCCAGAC Gene BVT0102_105398 + 0 NULL GK000018.2:8291318-8302540 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27281 GACCTGCGGGTTTTTACTTCGCAGAACATCAGTATAGACGCGGCGGCATTCAAGAAACTG Gene GeneID:516237|MSLN:NM_001100374:189_cdna Constitutive 0 NULL GeneID:516237 25 GENE MSLN NULL mesothelin EMBV3_23313 GGAACCTAGGAAAGCACAGTGTGACTGGAGATCTCTGGATGACAGGGCGCAGCCGTGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26473 TGGCCCTCGATGTGCTCTGCGTGTTGCTGGACTCTCCTTTTATTCGGGCCACTCTTCATT Variant GeneID:617172|PPAP2A:NM_001080329:7_cdna 444^876 3 EMBV3_32965 GeneID:617172 20 GENE PPAP2A MGC133873 phosphatidic acid phosphatase type 2A EMBV3_14875 GCGTAATATTTGTTTGCAGAAGGATGATCACGATTATGATCCCCTCTAATTGACCTGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34096 TAGCTGTTGTGAGATGTTCCTTGAGTCCTCACAGATAAAATATACAGACTGTGAAAAATC Gene GeneID:613606|AKAP7:NM_001102266:7_cdna Constitutive 2 NULL GeneID:613606 9 GENE AKAP7 MGC139521 A kinase (PRKA) anchor protein 7 EMBV3_21952 TGGGAGATCAGTGGCCCGTGTACTGCCGGGTGATACGTGAGAAGAACCTCTGTCAAGACA Gene GeneID:537961|ADAMTS19:XM_002688969:131_cdna Constitutive 0 NULL GeneID:537961 7 GENE ADAMTS19 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 19 EMBV3_11067 TGTCTTTAGGTTCTAGGACAAATCTGTAGTTCTGTACACCCCTTCTGTCAGCCAGGATGC Gene GeneID:525772|PLEKHG1:XM_002690335:1_cdna UTR3_Alt 2 NULL GeneID:525772 9 GENE PLEKHG1 NULL pleckstrin homology domain containing, family G (with RhoGef domain) member 1 EMBV3_39457 GTGGGCTGCCATTCCCTTCTCCAGGGGGTCATGGAAACTTCAAACAATCGTACATAAGAG Gene GeneID:514162|LOC514162:XM_002691888:24_cdna UTR3_Alt 3 NULL GeneID:514162 12 GENE LOC514162 NULL similar to aurora borealis EMBV3_41773 GCCTCTGCCCTCCTCTTCTGGAGATGGTAATTCTGCTCATATTGCACCTAACTAATAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39739 TGTTGGGGGAGCTGGCATCACGGTCCTGCTTTCTCTCTGCCTGTATCTCATCTTCAGAGT Gene GeneID:618268|LOC618268:XM_002695236:26_cdna Constitutive 0 NULL GeneID:618268 18 GENE LOC618268 NULL similar to Sialic acid-binding Ig-like lectin 5 precursor (Siglec-5) (Obesity-binding protein 2) (OB-binding protein 2) (OB-BP2) (CD33 antigen-like 2) (CD170 antigen) EMBV3_37765 TGTACGGAATCACGGAAATACCGGTCAAGCAGTCTTTCCTGCCCTGTGACTTGACGTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30477 TTACCCAAGTGTAACCTGCCTTCAGAGATGTGCTCACCCCCACTCGCTTGGTGGATTTTC Gene GeneID:507905|JMJD5:NM_001075339:5_cdna Constitutive 0 NULL GeneID:507905 25 GENE JMJD5 FLJ13798 jumonji domain containing 5 EMBV3_04282 TTCCCGATTCCTCCTACCCACACAGAAGGCCAGGAGAATAATGTAAGAAGCAGAAGAGGG Gene GeneID:404034|OPTC:NM_205770:31_cdna Constitutive 0 NULL GeneID:404034 16 GENE OPTC SLRP opticin EMBV3_40127 TTTTGGTGAGGGGACCCTACTCTGTTATCCCAAGTGCCCTTATTCTGGTGAGGAGAAACC Gene GeneID:508424|PIM2:XM_002700100:227_cdna Constitutive 0 NULL GeneID:508424 X GENE PIM2 NULL pim-2 oncogene EMBV3_06415 GGAGGGTGCAAACAAATAACACTGGCGTGGGCTCGCAATGCCTCAGCCACCCTGGGTCTG Gene BVV0102_311469 - 1 EMBV3_26417 GK000023.2:25656503-25855144 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135686 1 XLOC_081909 NonCoding TCONS_00135686 XLOC_081909 NonCoding NonCoding - 23:5564452-5565064 - TSS100976 612 1 TCONS_00135686_1 61 0.998366013071895 1 0 3.03831961022256e-05 3.59015673730887e-05 2.29804137221016e-05 1.01766610698049e-05 3.70362432715272e-05 5.07661964340341e-06 1.10758368817426e-05 5.7040489206824e-05 3.38327682501454e-05 2.20891003202813e-05 2.96715970182216e-05 2.85106052243578e-05 1.82065087110459e-05 0.000683293584126459 9.27953894208531e-05 0.000584880953117464 0.000292600602475138 0.000160776416245991 3.38961852954374e-05 3.65578386659693e-06 1.30267813592569e-05 0.000211907639687618 0.000280607942807698 0.000403316711025548 8.66232163503816e-06 1.60981087558788e-05 7.87532599931056e-06 7.76334666729857e-05 0.000154742527664633 9.01271066425861e-05 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 3e-18 96.9 82.29 0.155228758169935 0 noncoding 1 1 1 1 0.0625517282911949 0.738322173835902 0.00242228869859032 0.963275449168336 TGTGGGTGTTGTGGGTTCAGTTCATTTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCCGTAGTAACCACAGGATTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCCGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGGGAGGGAGGGAGGGTGCAAACAAATAACACTGGCCTGGGCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCGCTCACAGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTACTCTTCCCAGGTCCGAGCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCG TCONS_00133796 . 5' 86657 TCONS_00133796 . 5' 86657 EMBV3_41244 CCAGGCTTTTCCCTTTATCTGAGAAATCAGCACACAGAGGACAGAGAAGAAGGAATGGAT Variant GeneID:100138748|THOC1:XM_002697732:211_cdna 543^625 3 EMBV3_04993 GeneID:100138748 24 GENE THOC1 NULL THO complex 1 EMBV3_12220 GCCAGAAGCAGGTGGTGGAGAAGATCCCGCTGCCTTTCTTTGCTGTGTCCATGAGTCTGT Gene GeneID:100301213|LOC100301213:XM_002697970:703_cdna Constitutive 0 NULL GeneID:100301213 25 GENE LOC100301213 NULL similar to WD repeat domain 5B EMBV3_43653 CCCCTCTCTGGTGTAGAGAGGAGGTGACAAACAATATCTCCTGAGATCACTGTGAGGATT Gene GeneID:511469|ALDH3B1:NM_001075518:598_cdna Constitutive 0 NULL GeneID:511469 29 GENE ALDH3B1 NULL aldehyde dehydrogenase 3 family, member B1 EMBV3_27726 TTGACCTAGCTTAATCCCACCATAGTTACTTTTTATATCAGGAAGTCAGATCCACAATAC Gene GeneID:507498|CKAP2L:NM_001098901:53_cdna Constitutive 2 NULL GeneID:507498 11 GENE CKAP2L FLJ40629 cytoskeleton associated protein 2-like EMBV3_24261 TCTGTGGACATTCCATATGAACACACAAAAGTATCATAGACGTCGTAGGAAACTGAATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26583 TTATTTGGGGATGTCAGTGGAATCCTCCCTTCCACCCCATCTCTGCACCTCTCCATCCCC Gene GeneID:281401|PIGR:NM_174143:10_cdna Constitutive 2 NULL GeneID:281401 16 GENE PIGR NULL polymeric immunoglobulin receptor EMBV3_16451 GCCCTGTAGATGCTTTTCCCCACGTATCTGGCAGTCTTTGTTGTCGTTTATATCCTGGGG Gene GeneID:513420|BTBD3:XM_002692033:28_cdna UTR3_Alt 2 NULL GeneID:513420 13 GENE BTBD3 NULL BTB (POZ) domain containing 3 EMBV3_04824 CCCCCAAACTTTCTTTCACCTTTCCTATCCCAGCACAACAGCAAATCTCTGTATTGCATC Gene GeneID:527048|EXPH5:XM_002707728:69_cdna Constitutive 0 NULL GeneID:527048 15 GENE EXPH5 NULL exophilin 5 EMBV3_05446 TGTACATAGAGAGACCTCTGGGCAGGGTTGGGGTGTTCCTTGATTGTGACAGTGGGAGTA Gene GeneID:528630|TRIM43:XM_002699040:66_cdna Constitutive 0 NULL GeneID:528630 29 GENE TRIM43 TRIM43B tripartite motif-containing 43 EMBV3_24286 TTATCATCATTCGAGGCCACCGCTTCTGCCTCTGGGGTTCTGTGTATTTGGATGCTCATG Gene GeneID:537932|UBR3:XM_002685283:73_cdna UTR3_Alt 2 NULL GeneID:537932 2 GENE UBR3 NULL ubiquitin protein ligase E3 component n-recognin 3 (putative) EMBV3_11197 GTAGTTATGTTCTGACAAAGTGATGAGGCTCTACGTCCACCCCTCTGTGGAACCAGTGAC Gene BVV0102_303343 + 0 NULL GK000008.2:61951513-61954946 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227858 TCONS_00227859 TCONS_00227860 TCONS_00227865 TCONS_00227861 TCONS_00227866 TCONS_00227864 TCONS_00227863 TCONS_00227862 1 XLOC_138354 Coding TCONS_00227861 XLOC_138354 Coding Coding ZBTB5 8:61952032-61981029 j TSS170021 5344 1 TCONS_00227861_2 679 0.0492140718562874 2 0.815767692095461 3.04848828543736e-05 0.00209018986572184 0.00136770284938508 0.000637237950803594 6.63673923438851e-09 0.000823734764354698 2.97669651443474e-07 0.000876167153105666 0.00180412412538577 9.00429071778681e-06 1.0336386644686e-05 7.3069135307372e-12 1.6440164517379e-10 1.59994721308538e-09 0.000142490548207272 0.000439961217844012 0.00189708069125655 0.000833551066317365 0.00156419741791273 0.00252685067750745 0.00116626790488861 0.000302873302419256 0.00020793872061551 0.000229866410952672 5.05620805414292e-08 0.000713835430677243 0.00108253164295259 1.75546628492074e-09 1.36176770304287e-05 0.000116460249917392 XM_005210157.1 ZBTB5 PREDICTED: Bos taurus zinc finger and BTB domain containing 5 (ZBTB5), transcript variant X5, mRNA. 0.0 7975 100.00 0.827282934131736 NM_014872.2 ZBTB5 Homo sapiens zinc finger and BTB domain containing 5 (ZBTB5), mRNA. 0.0 4134 80.84 0.822417664670659 TCONS_00227861_2 sp|O15062|ZBTB5_HUMAN ZBTB5_HUMAN Zinc finger and BTB domain-containing protein 5; 0.0 1307 95.27 0.994108983799705 2 coding 1 1 1 0 -0.139785257884567 0.255709833145925 -0.0280249388260595 0.611112219214995 CCGGAGGCTGACCCTGCACGGATGGAGATCATGGATTTTCCTGGTCACTTTGAACAGATCTTCCAGCAGCTGAACTATCAGAGACTTCATGGCCAGCTCTGTGACTGTGTCATTGTAGTGGGGAACAGACATTTCAAAGCCCACCGCTCAGTACTAGCAGCATGCAGCACGCATTTCCGAGCCCTGTTCTCAGTGGCAGAGGGAGATCAGACCATGAACATGATCCAGCTGGATAGCGAAGTGGTGACAGCAGAGGCCTTCGCCGCACTGATTGACATGATGTACACCTCCACTCTCATGCTGGGGGAGAGCAATGTCATGGATGTCTTATTGGCAGCCTCTCACCTGCACCTGAACTCTGTTGTTAAGGCATGTAAACATTACCTGACGACACGGACGCTGCCCATGTCTCCCCCCAGCGAGCGTGTTCAGGAGCAGAGCGCCCGCATGCAGCGCTCCTTTATGCTGCAGCAGCTGGGACTGAGCATTGTGAGCTCCGCCCTCAGTTCCAGCCAGAGCGGTGAGGAGCAGCCAGCCCCCATGAGCTCCTCGCTGCGCGGTAACCTGGACCAGCGGACGCCCTTCCCCATGCGCCGCCTGCACAAGCGCAAGCAGTCTGCGGAGGAGCGGGCCAGACAGCGCCTCCGACCCACCCTGGACGAGTCTGCCATCTCCGACGTGACGCCAGAGAACGGGCCGGGGGTTCATTCCCGGGAGGAGTTCTTTTCTCCAGATTCTCTGAAAATCGTGGACAACCCTAAGGCGGATGGGATGGCCGACAACCCAGACGACAGCACCATCATGTTTGACCAGTCTTTCAGCGCTCAAGAAGATGCCCAGGTGCCCAGCCAGTCCGACAACAGCGCCAGCAACATGGCCCAGCTCTCCATGGCCTCCCGTGCTACTCAGGTCGAGACTAGTTTTGAGCAGGAAACCACAGCTGAGAAGAGTGCTTTTCAGTGTGAAAACCCGGAGGTGGGCCTTGGTGAGAAGGAGCACATGAGGGTGGTGGTCAAATCTGAGCCCCTGAGCTCTCCTGAGCCTCAGGACGAAGTGAGTGATGTGACCTCCCAAGCGGAAGGCAGCGAGTCGGTGGAGGTGGAGGGGGTGGTGGTCAGTGCTGAGAAGATAGACCTCAGCCCAGAGAGCAGCGACCGGAGTTTTTCAGATCCCCAGTCTAGCACTGACCGGGTAGGGGACATCCACATTTTGGAAGTCACCAATAACCTCGAACATAAATCCACCTTTAGTATTTCAAATTTTCTTAACAAGAGCAGAGGAAGTAACTTTAGTACCAATCAGAACAATGACGATAATCTCCCAAACACAACCAGTGACTGCAGGCTGGAGGGGGAGGCCCCTTATTTGTTGAGTCCAGAGGCTGGGCCTGCGAGCGGGCCCTCCTCGGCCCCTGGTGCTCATGTGGAGAACCCATTCAGCGAGCCCTCGGACTCCCACTTTGTCAGGCCCATGCAGGATGTGATGGGCCTACCGTGTGTGCAGACCTCAGGCTACCAAGGAGGAGAACAGTTTGGGATGGATTTTTCCAGGTCCGGTTTGGGACTGCACTCCTCCTTCTCCAGGGTAATGATGGGTTCCCCTCGAGGAGGAGCCAGTAACTTTCCATACTACCGCCGCATAGCTCCCAAAATGCCAGTGGTAACTTCTGTCAGGAGCTCACAGATCCCAGAGAATTCTGCCAGTTCCCAGCTAATGATGAATGCTGCCACATCCTCATTTGAAAACGGCCTCCCTTCGCAGCCCGGCCCCCCGCAGCTGACGAGGGCATCTGCTGATGTCTTGTCAAAGTGCAAGAAGGCCTTATCGGAGCACAATGTCTTGGTTGTAGAGGGGGCTCGAAAGTACGCCTGCAAAATCTGCTGCAAGACTTTCTTGACCTTGACAGATTGCAAGAAGCACATCCGTGTTCACACAGGTGAAAAACCCTATGCCTGCCTGAAGTGCGGCAAGAGGTTCAGTCAGTCCAGCCACCTGTACAAACACTCGAAGACCACCTGCCTGCGCTGGCAGAGCAGCAACCTCCCCAGCACTTTGCTCTAGCCTGACCTCGAGATAATGCCGATGCCAGTTGTAGGACTGGAACTAAAATCTCTGGTTGGTTGGTGGTTAATGCCATGGGGTTTAAGACTGCAGGCTGTGAGTGGCTCTTGCAGATTTCGAAGACTAATAAGTGGAGAGTTCATAGGTGTAGTGCTTGTGCTGCTGCATTTCTGAGTGCAGTGCACACATTCAGAGGAGGGATCCAGTCCCTGAAACCACGTTCTTCCTTAGAGTTGAGTAATGCAGTCGGAAAGCAGTCTGTAATTGATGTTAGAAGTGGCACATTGAAAAATTAAACGTTGAAGTGCAAAAACATTTTTTAGCAATTTTTGTAAAACTGAAGCATTTAATTAAATTTCCTATATACCTTCTGATGAGAATATTATATACTTGTATACAGTGATGCAAAACGCACTTACGTGTAACCAGTGGCAACTTTGTGCCTGTCTAAAAGGAACACCCTTGAGGACATGCCTGTCTGCCAGAAATGCTTTAAAGTTTATCATGAGCTGGTTCTAGGCTTCAGAAAGTACTGTATTTTTTTTGTCTGATTTGCAGTCACAGATGCTGCACTTTGATGGTGCTGACACTGGGTCCAGAGCGAGCATTCTCTGGACTAACAGGTGTGTATATACTTTTGAAAACATCATTGTTAGATAGATGTTTTAACAATTTTTCCCAGTTTTAAAGACAAAGTTGTAAAAGGAGTATGTACTTATGAATAGGGAGCGACAAGTAAGGTGTTGTTTTTGTATGTGCTGTTTTAGCGGTATTTTAACCAACTTGTATTACACACGTTACAGTTTGGAAGTCAGAAGAGCTAGTGTCGTCTTTGTTCTGATGACGTGCAGTCCTGTTTAGTGGGGTCTTCTACGGCGCGTTTACCCTTTGTTCCGTGCAGATTTCGGGGGCCGGTCCAGCCTGACACATCTCACCCAACAACAAGCCCGTTTTCTGCTTCGCTTCTTCACACTTTCATGCCACTTACAGCATCTTTCCTGGGCCTAGATTACTGTTTTCAGGTAAAAAACTAACCAAAAGTGAAGTCGACCCCCCTCCATCGTGGGCTTTATTACTGTTCTATTCTGTGGTTTTAAAGTACAGACCCTGAGCTTCTGTTGTTGCCCCAGCCCAATACTGAAGGTTTAAAATCCAGACACAGCACTGTTCATGGGTAAATATTTTCCCATCTCTATAAGAGGATTGGGTAGCCCAGAGCATAGAAGCCACCAGGTAGCATCTGAGACAGTCTGAGGAGACCCCTGGGTGACTGACCTGGCCTTCTCTGGGCCATCCCTGTGGCCTTCCAACCCTTTGGGCAGCATCTGTTAGGCTGAGCCCTGGCTTGAGAGCTTCCAGGGGAACAGCACAGGTTAATGTGTCTCTGTAGAGCTCATGAAGTCAGTTTAATTCATACATGAACATGAGTTCATTTTTTTATACAGTTTATTTGAGACACCCCAAACCACTGTGCATAATTGAGCAAAATCCTTCAGTTCTTGTGTTTAGGAAAGTAGTCAGCATGTGTCTTCTCTTAATCTAGCATATGCAGTTACAAGTCTGTCTGTGGATAAACTCATAATGCTCACTGTCAGATTTAGCATCTCGTATGAACTGATTCCCAGGGAGGAAAACCAAAAGGGAAGCCTCTGGTCCGTCTCCTGAAAGGGGAGGGGAGAGGTGGGGAGGCGGGTGGAGGCCGCGGGATCACCTGTGAAGTTTGGTATGTGTGGAAAATTGTTAGTAGTTATGTTCTGACAAAGTGATGAGGCTCTACGTCCACCCCTCTGTGGAACCAGTGACTTGTGAGATCAACCCTGGGAGGCAGGTGGGTCAGCCTGGAGGAGGAGAGGCCCTGCCTGGCCTGGGAAGAGGAGCTGGCGGCACATAACAGTGGTCACCCTCCTCCCCTTCCACCTTGAGGAAGAGGTGCCAGGAGGTGGTCCCCGACCTGAGCTCAGGCTTCAGTGGACTTGCCTCGGGGACTGACACAGTGGCTGGAGCCCCGCCTCTCCGCTGCCCAGTGGAATCTGGAATCTCTCATCTACCTCTTAGTCAATCAGTTTCTGTGTGTGAGAAGCAAGCCTGTGGGCCAGTGTCCTTGTACATGCTGTAGCACTTAAATAATTCAGAGGTTCCCTGGAAGACCAGTCCCAGGGTTCCTACAACTGGTAGTTTCTACCTGAATTTTAACTGGTATTGGGTACCTGGATTTTGATTGGTTAGCCTTAATTATAGCTTGGCATAATCATTTCTGGTGACCAAATCATTAAGTTCTATCAGGGCACCTGGGTCAGTGGTGCTATGCTGGTCAAAATTTGAGACTTTGAAATAAAAGCTTTGTCATATTAATGCCTCTAACTATGTGTTCTTTTTCTTCACCTTGGGTTATTAAGGTTAACAAAAGAGTGAAGTAGTATTGCTTTTTCTGCTAACTCTGCTGTTACCAGTACTCTGTTTTAAACCAGGCATCTTAGAAAATACTCTGATGCTGTCAGTAACAAGTATTGGTTGTTTTTCCCTCTGTGCTGTGGATGGGGGTGAGGCGGTGTCCTCCTAGAGGGCTTGCCAAATTATGTACTTTCTGCTGCTCCCTTACCTGCCTCCTAGGGGAGAAACCCCACTCTTCAGTCTGGCTTGGCTGCGGGGAAAAGCTGGAGCCGAGTCCCTCAGCAGGCGCAGGGCTTTGGCACTGCTGGCAGCCAGGCCTGAGGAGTGAGAAGGTGCCTAGTGAAGGGCACCCACCTGGGAGGGGGAGGGGAGGGGAGGGGCTAAAACTAAGTTAAAATGAAAATGAAAGAAACCTACCAAAAAAAAAAAACAAACCTACCTGCCCTGATTATTCTTGACCAAAAAGTGAGTATTGTGACCTTATCTAGTTCACTTTGCCACATGTATTTAATTTGCTTGACAGTCTAGGTAGCAGGTCCCATTGCTGTGGTCACCACAGGGCTGTGACTGTCCTGTCCTCAGTGAGGGAAACTTGGAGGCCTTTTGGCTGAGGCTAAGGTGGCTTGGCATCTGGTCCCATCATTCATGGCAAATAGATGGGGAAACAGTGTCAGACTTTATTTTTTTGGGCTCCAAAATCACTGCAGATAGTTACTGCAGCCTTGAAATTAAAAGACGCTTACTCCTTGGAAGGAACGTTATGACCAACCTAGATAGCATATTAAAAAGCAGAGATATTACTTTGCCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAATTGGACTGTGAAGAAAGCTGAGTGC EMBV3_30872 CAGGCACAAGTGAACCAATTATGACTATTGCACCAGGCTGTGTGACTGCTGTATGACAGG Gene GeneID:536605|FBXO22:NM_001099074:124_cdna Constitutive 1 NULL GeneID:536605 21 GENE FBXO22 MGC157370 F-box protein 22 EMBV3_23746 CATCTATCACCACCTCTTCTGACAACAACCCCTAATCTCCATTTGGGAAGGCTGTGAGGC Gene BVT0102_102303 + 0 NULL GK000002.2:37620038-37814941 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26943 ACAATCATTTGGGAAACCTGAAGGGCTGATGTACCCATGTGTTCCTGACTGAAGCCCAGG Gene BVV0102_261965 + 1 EMBV3_20239 GK000002.2:36319503-36373938 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102200 TCONS_00102204 TCONS_00102202 TCONS_00102201 TCONS_00102205 TCONS_00102203 1 XLOC_061827 Coding TCONS_00102205 XLOC_061827 Coding Coding ITGB6 2:36340824-36350758 j TSS76175 2558 1 TCONS_00102205_2 107 0.0535574667709148 3 0.74277660324172 1.11175334282928e-09 0.000121027587211085 2.78269308455893e-15 0.000128641607528866 8.95568176847915e-05 1.31973966315166e-05 0.000211199912652966 0.000311328298430304 0.000576270558691373 0 4.92200708263275e-05 8.75826940558449e-11 4.31695240124599e-11 2.84753394542035e-10 0.0001244294521757 1.06978489454784e-16 1.00256090320445e-09 0 1.87353103626463e-10 1.31832283297795e-10 1.60693914175681e-05 1.51599597055484e-10 9.10249978655992e-24 3.01871144486431e-11 2.22468445170025e-05 9.46136693492678e-05 3.1413323999339e-05 1.12648029476753e-05 0 0 XM_005202407.1 ITGB6 PREDICTED: Bos taurus integrin, beta 6 (ITGB6), transcript variant 0.0 4194 100.00 0.90852228303362 XM_005246537.1 ITGB6 PREDICTED: Homo sapiens integrin, beta 6 (ITGB6), transcript 0.0 1977 79.38 0.90852228303362 TCONS_00102205_2 sp|Q8SQB8|ITB6_BOVIN ITB6_BOVIN Integrin beta-6; 1e-56 189 92.00 0.906542056074766 1 noncoding 1 1 1 1 0.10092907241254 0.486228589158456 0.00840073915915905 0.867322765214747 CCACACCTTGGTTTTACAGACGAGGGCACTGGGGCTCAGAGAGATAGAGAGACTTAATGGATTTCAGACAGCTACTGTCCATCAGATAGGAATGGAACCCACCTCTCCTGAACCCAATTCAGGAATTTTCCAAGACACCAGGGCACTGCATTAGAGTGAAAATAAAACTGAAAATCATGATTATTTTCTGTCTATATATTTTAAAAGGAAGAACAAGTAGTATACTTCAAGTGGACTGTCCAAAACCTCCAAATATTCCCATGATCATGTTGGGGGTTTCGCTGGCTATTCTTCTTATTGGAGTCGTCCTGCTGTGCATTTGGAAGCTCCTGGTGTCTTTTCATGATAGGAAAGAAGTTGCCAAGTTTGAAGCAGAAAGGTCAAAGGCCAAGTGGCAAACGGGAACCAATCCACTGTACAGAGGCTCCACCAGTACCTTTAAAAATGTAACCTATAAACACAAGGAAAAACAAAAGGTTGATCTTTCCACGGATGGATAGAACTACTTTATGCACAGACAAATTTTGTTTCACTGATATGAAATGTTATTGCACTATTTAATTTTTCTCTCTTTGTTGTTTTAAGTTTGGTTTAAGATAATAATAGGTCATTTGGAGATCAGTCATTTTCTGTGTGAAGGTTAGAGACAATGTTGACAGTTTCGAAATAATCAAGAAGAGAGATATCCTTAGCAAAGAGGTGACTTTGGGGATCATTTCAAAAATACTAACTCTGTTACATTAATGCCTCAAAAAATCATCAAAATGATTCATGAAGGCCTGATTTGCATTTGAAAAATGTTTGAAATTAGAATCTCATTTGTTACAGAAATACAGCTACCTGAAGTCTGTCTCAGCAAAGTCACAAAGTCCATATGCCACATTATATAGTCAAATTTGCCAACGAATTCTAAACTTTTAGTAAATCTGCCCTTTCCTAAAGGAAGGTTTTTTTCTTAACCAATGAAAAAAATGAGATACTGACTTTTACTTAAGCTATAGGATGTAATTCTCCTAAAGATGCTCCTCATGTAAGAATGTAAATGAAGTATTAATAATTTCTACAGATTTGAATGTCCCTAAAAGTCAATTTTTTTTTGTTTTACAGATGAAGAAAAAGTAATTTATAGATTAGGAAGTCACCAGTAAAACACAAAAATAACAGGCCTATCATTAGGTTATGTTTAATGACCTGAAAAATAAACTTCTACATTCAGTTTCCCGATTGACCCTGCGTTTTCAGACTATTACTCCTTCTGTATTTCTCAACCCATTTAACTCAGTTTCACAGTCATGTAAACCCTGTAAATTTCATATGAAAGTTTTAATTTCTTGTCAAAAATTTTAAATAGTGAGATAGCTTATTCAAATTGAGCTCCAATAACACAAAAGGACCATGCATTAAACAGAATAAAATTTTTAATGGTTTTAAACCAAACGCATCATGAATACACAAGTCTCCTGTGAGTAATAGGCTTACTTAAATCTGTATTCTTTTTCCATTTGCATAACCCGGCTTGCATATTTCAGTTGCATATGGTGAATATGCTACTTGAAAAAGTTGGATTTTACTTGCAAAATACATGTGGGTAATTAGGGATCCACAGGTTAATTGAAGAGATGAACTCCGTAGAATATTATTCCTTATAGTTAATATTGCTTCACACAGCACTTTCATCTCATTGATCCTCGGGAGGAAACTAAGCCTCAGAGAGTGGGTGGAACTGGTCTGGAATTGAGATCTTCTAGCTCCAAGCTGCTGCTTCTTTCCGCAGTGTGAGACTGACTCTTATCAGTGAAATGATAGAAAGATTTTGTTAGTTAAGTGATAATTGCCATTTGTTTGAAAATGTAGTGGCTAGACAAATAGCACTTAAACTACTGGAATATAGATGAGGTCTTGTACTTTTGTGCAATGTTTATTACCTTTGAGAAAATTGTAATGTGAAGCCTTTTACTAGGTGGGTAGTTCATTAGGTAATGGAGGCTTCGTGTTTATCCACTGAACTGGCACAGAATAACCCATGATAAGTCTCTTCAATTCTGTCAGAGAGTTTGGTACACAATTTGATCACTTAGAGACTTATTTTTTTCAGGTTTCTAAATAACTCAGGTAAATTAGACACTTGGGGAGTATGCAGTTATACTAAAAGAATTACTAAACAATCATTTGGGAAACCTGAAGGGCTGATGTACCCATGTGTTCCTGACTGAAGCCCAGGGTTGGTGGGAAATCTCAAGCAATAAGGAAGTTGCAATTCCAATGACACAATGGCGGTATTCATCTCTACGTGTGATATTTTTGTATTACTACTAGAATGGGATTTTAGGATATATAAATTTCCTTTGTGTGTATATTGGGGAAGGTAGAAAAAAATCTGCTATTTCTCTGCATCCTGTTTTGATCCAAGGCTGGACCTTGAAAAGGTCAAAACATTAACAGTAGTACTTCTGTTCACTGAAGAGTTATGTTACATGAAGATACAGTGGTTGTTTTTTGTAAGTTGCTTTATTGTATTTTGCATTGACATAAATAAACATCATAATTTAAACAATGAA EMBV3_40652 TTAAAGACCCATCAGTGTTCATCCCGCCAAGCACATGCCAGACAGCCCAACCAGAGAGGA Gene GeneID:615376|EPDR1:NM_001102288:81_cdna UTR3_Alt 2 NULL GeneID:615376 4 GENE EPDR1 MGC165819 ependymin related protein 1 (zebrafish) EMBV3_28405 GCAGCAGTGCGCAGAGTGATGCAGCCCACAATGCTTTGCAGTATTTAAAGATAATAGCAG Gene GeneID:282875|PRKRA:NM_001045870:8_cdna Constitutive 0 NULL GeneID:282875 2 GENE PRKRA MGC137944 PACT protein kinase, interferon-inducible double stranded RNA dependent activator EMBV3_35506 CCCCTAAGTCTTCCCTCATCCCTTTTTACCCAATTGTGCCACTGCAAAGAGAGCCGCATG Gene BVV0102_299638 + 0 NULL GK000010.2:20785955-20786858 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013007 TCONS_00016261 TCONS_00013004 TCONS_00016262 TCONS_00013003 TCONS_00013005 2 XLOC_007970 XLOC_008680 Coding TCONS_00013007 XLOC_007970 Coding Coding CHMP4A 10:20782604-20786888 j TSS9724 1922 2 TCONS_00013007_2 117 6 0.55265001167406 2.6567425897857e-10 8.76543077542902e-07 9.44541935429006e-27 1.14851337771679e-06 0.000124877363678264 2.77932091183977e-05 6.24478997640767e-15 2.38894761561285e-11 9.5303223262929e-09 0.000218264633153601 4.2060648992068e-05 1.0247011569629e-07 2.91277131406693e-06 0.000220115722774249 8.47395828905804e-107 0.00178591328237097 7.97402380175677e-55 0.00609604853425704 2.23455663359104e-09 0.00022206237749253 0.000766325482255692 0.000542337327435039 3.27228815245301e-09 0.00103700948128998 0.000104147886840374 1.86197528217476e-30 1.66307272018385e-09 0.000227121606211319 7.44254703740453e-10 4.66222353730486e-06 XM_005211387.1 CHMP4A PREDICTED: Bos taurus charged multivesicular body protein 4A (CHMP4A), transcript variant X1, partial mRNA. 0.0 1611 100.00 0.464099895941727 NM_014169.3 CHMP4A Homo sapiens charged multivesicular body protein 4A (CHMP4A), mRNA. 0.0 1173 88.03 0.481789802289282 TCONS_00013007_2 sp|A2VDY3|CHM4A_BOVIN CHM4A_BOVIN Charged multivesicular body protein 4a; 5e-76 228 100.00 0.991452991452991 1 coding 0 0 0 0 -0.0199857885838456 0.844844892197863 0.0419410992936437 0.400651311876132 GGCTCCCACTGTTGAGGCTTTGGGGACGAGTTTCTTGGCATGCAGTCCTTTCCAAAGCACTGGTGCTTCCTTCATGCTGGGCCGGAGGCAATCTGAGGAAAGAAGGAGAAGGGGCCAACCCCTGAAGAGGCAATACAGAAACTGAAGGAGACGGAGAAGATATTGATCAAGAAACAGGAATTTCTGGAGCAGAAGATTGAACAGGAGCTACAAGCTGCCAAGAAGCATGGGACCAAGAACAAGAGAGCTGCCCTACAGGCTTTGCGGAGGAAGAAAAGGTTGGAACAGCAGCTGGCACAAACCGACGGGACATTATCCACCCTGGAATTTCAGCGTGAGGCCATTGAGAATGCCACCACCAATGCAGAAGTGCTTCGTACCATGGAGCTTGCTGCCCAAGGCTTGAAGAAGGCCTACCAGGACATGGACATTGACAAGGTGGATGAACTGATGGCTGACATCACAGAACAACAGGAGGTGGCCCAGCAGATCTCAGATGCCATTTCTCGGCCTGTGGGCTTTGGAGATGACGTGGATGAGGATGAACTGTTGGAGGAGCTAGAGGAGCTGGAGCAGGAGGAATTGGCCCGAGAGTTGTTACACGTGGGTGACGAGGAGGAGGAGCCCCCGGTCGCACTGCCCAGTGCACCCTCTACACATCTGCCTGCGGAGCCAGCTCCCAAAGCGGATGAAGATGAAGCGGAACTAAAGCAGCTGGCTGAGTGGGTGTCCTGATGAGTCTGGGGTTGTCAGCTTGACGCTGCCTTTGTTGCTCTCTTTTCCTTAAGTGCCAAATGCTGAGCTAAAGGAACATGGCCTTGTTGGTAGGTCCTGCTGAGGGTGGTGGTGTGACCCTGCCTGAGAAAAGGGTCTGTGGCCCTCCCTTCCCTGGCTCAACTATGAAGAAGGATTGGTACGGGAAGAGCCCCTGGGCTCCCATGGATAGCATTACAGTGCCCTCATCCCCAATAAAACTGGGTGGACGGAACCCTAGTGCTTATGCTGCCTTGTCTACCACTGAAACTCATCTCCTGGTTCTTGGAGCTTTGTCTCAAGAAATGAGTGACAATGAGAGTGAGAAAGGGGAGCTGTAGCGTAGAACAAATGGAGCTTCCAGTATCTTAACCTGGTGTGTTCCAGGCAGATATTGTTCCATCTCTCAAGCTGGTTTGTCCTAGGGATGCCTAGTGCTGAGCGTAAGGAAACTGCCGTCTAGTGTTATCCCAGAATCATGTGGGGCTGCCCCTAAGTCTTCCCTCATCCCTTTTTACCCAATTGTGCCACTGCAAAGAGAGCCGCATGATTTACTACCCATATTCCTTTTACTAAGCCCGTTCACAGATAGGAAAGGAGAAATACACGGATGACGGGGTAAATAGGTTTGCTTTCTCCAGAACGCATAGTGAATAGGCTTGGTTTGAAACTGTTACTTCCACGTGTAGGAACAATAATGAGGGACCCTAACTCCCGGGACTGTTTCAGTGGTGGTTAAGGTGGCATTTGGAGGAGGAAGGAACCAAAATATTGCCCACCTCCTGATACTGGTTTCTAAAAGAATGAACAGTGCTGTCCCTTTGGACTGTAGACAAACAGAGCAACCAGGGTAGAGCAAGTTCTGCCCCACTACTTGAACATGTGGAGTGCATGGAGACACACAGCAGCGAGCATGTCCTCAGCCAGAACAGTGAAGCGTCTCCGAAGCAGGTGTTCCTCCCATCTCGCCCAGCCCACCTTCAGAACCACAGAAGAGCTACACTGTAAATTACAATCTAGACTTAACTGGTGTCAAGATGACTGGTTACAGGCTCTGGGCAGAAATCCACCTCTCACCCTCAGCACTGTTCCCTGCTAAGGGTCCCCTGAGGAAAGAATGTGACTCCAGCTAATGAAACTAAAACAGAATTAGACTTATTTATTTTTGG EMBV3_17763 GTACAGTGGATTAACCCAGGGAACAAAGGAAACCAAAAATGATACCTACCAGTTAAGAAC Gene BVT0102_134637 + 1 EMBV3_21981 GK000030.2:47828192-48002300 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38109 AGCAGAAACAGATTCTCAGTTCATTTTTACTCCCACTGTATTATAGTTTAACAAAAATTG Gene GeneID:539566|NIPBL:XM_002696375:86_cdna Constitutive 1 NULL GeneID:539566 20 GENE NIPBL NULL Nipped-B homolog (Drosophila) EMBV3_18397 GTCCTCCCGGTTCTTATCCATCATGGGGGAGGGGCACGGGCCTGAAGAGTGTTTTATAGA Gene GeneID:524218|STK32C:XM_002698604:29_cdna Constitutive 0 NULL GeneID:524218 26 GENE STK32C NULL serine/threonine kinase 32C EMBV3_26240 CTGAACAATGGCTCTGCTTACTGGCACCAGCCTGTTGCAGATCTCTGGGGACCTTGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14112 GATTAGAGCCTCTGTTATCCAGTGGTCAAAACTCACTTTCCCCAAGAAGGTGTGAACCCC Gene BVV0102_251936 + 0 NULL GK000019.2:34771508-34796321 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30286 CTTTACAAGGATCATCTTCCTCCCTCACGGGGAAAGCACAGCAGGGATGAGTGGAAAGAA Gene BVT0102_134018 + 0 NULL GK000017.2:64722445-64724240 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075907 TCONS_00075899 TCONS_00075908 TCONS_00075909 TCONS_00075911 TCONS_00075906 1 XLOC_046677 Coding TCONS_00075908 XLOC_046677 Coding Coding CCDC64 17:64643564-64724031 j TSS57099 3260 1 TCONS_00075908_2 553 9 0.959597842567047 0.000693470928665309 0.000686577533378276 0.000318745934941695 0.00021305353134803 0.000147940264505279 7.61251741015945e-07 1.43932328674573e-06 0.000134485643024317 0.000319406359550443 1.86170264656379e-09 5.28192491412792e-07 0.000255214539884735 0.000113970573182168 0.000261302827284364 8.51029517101799e-11 0.00154623548801118 0.000176492266719588 0.00418295478270252 0.000283858856417069 7.72591630206962e-66 3.14381155685158e-05 0.000658063206471434 0.000398630581266455 2.82170757635479e-14 0.000599256404588578 1.07716395494031e-07 0.0001128810589712 4.99973389076592e-06 9.21358494012664e-05 0.000157683450505529 XM_003583329.2 CCDC64 PREDICTED: Bos taurus coiled-coil domain containing 64 (CCDC64), 0.0 2866 100.00 0.487116564417178 NM_207311.2 CCDC64 Homo sapiens coiled-coil domain containing 64 (CCDC64), mRNA. 0.0 2278 89.96 0.518711656441718 TCONS_00075908_2 sp|Q6ZP65|BICR1_HUMAN BICR1_HUMAN Bicaudal D-related protein 1; 0.0 942 93.85 0.998191681735985 0 coding 1 1 1 0 0.0349114361124144 0.818057695331788 0.00727984634256384 0.90248482288397 GCGCCTGCTGCATGGAGCTGCCCGCCGCGGCCGCGGACGCAGTCGGAAATCCAGCCACCGCCACCGCCGCTGCCCTCATCTCCTTCCCCGCGGGCCGCGGGGAGTTGGAACTGGCGTTAGAGGAGGAGCTGGCGTTGCTGGCGGCTGGGGAACGGCCGTCCGAGCCCGGGGAGCATCCTCAGGCCGAGCCCGGGCCTCCAGCCGAGGCGGCCGGACTGCAGCCGCCGCCCGCCCAGGATCCCGAGCTGCTGTCAGTGATCCGGCAGAAGGAGAAGGATCTGGTCTTGGCGGCCCGACTGGGCAAGGCATTGCTCGAGAGGAATCAGGACATGAGCCGGCAGTACGAACAGATGCACAAGGAACTGACTGATAAGCTGGAGCACTTAGAACAAGAGAAACACGAACTAAGAAGACGATTTGAGAACCGAGAAGGCGAGTGGGAAGGGCGTGTGTCTGAGCTGGAGAGTGATGTGAAGCAGCTTCAGGATGAGTTGGAGAGGCAGCAGGTTCATCTACGGGAAGCAGATCGAGAGAAAACACGGGCCGTCCAGGAGTTATCAGAACAGAACCAAAGGTTATTGGACCAACTCAGCAGGGCATCAGAAGTTGAGAGACAACTCTCCATGCAAGTACACGCCCTCAGAGAAGACTTTCGGGAGAAAAACTCATCAACCAACCAGCACATCATCCGGCTCGAAAGCCTTCAGGCCGAGATCAAGATGCTGTCAGATCGGAAGCGGGAGCTGGAGCACCGTCTCAGCGCCACCTTGGAGGAGAATGACCTGCTCCAGGGGACAGTGGAGGAGCTGCAGGACCGGGTGTTGATCCTGGAGAGGCAGGGCCACGACAAGGACCTCCAGCTGCACCAGAGCCAGCTGGAGCTGCAGGAGGTGCGGCTCTCCTACCGGCAGCTGCAGGTGAAGGTGGAGGAGCTGACCGAGGAGAGGAGCCTGCAGAGCTCTGCCGCCACCAGTGCGTCCCTGCTGTCCGAGATAGAGCAGAGCATGGAGGCCGAGGAGCTGGAGCAGGAGAGAGAGCAGCTGAGACTGCAGCTCTGGGAGGCCTACTGCCAGGTCCGTTATCTCTGCTCGCACCTGCGCGGAAGCGACAGCGCTGACTCGGCCGTCTCCACGGACTCCTCAATGGATGAGTCTTCAGAGACGTCATCGGCCAAGGACGTGCCAGCCGGCAGCTTGCGCACTGCCCTGAACGAGCTCAAGAGACTGATCCAGAGCATCGTGGATGGCATGGAGCCCACGGTGACACTGCTGAGCGTGGAGATGACTGCCCTGAAGGAGGAGAGAGACCGACTCAGAGTGACATCTGAGGACAAGGAACCAAAGGAGCAGCTTCAGAAGGCCATCAGGGACCGAGACGAGGCCATCGCAAAGAAGAACGCTGTGGAGCTGGAACTCGCCAAGTGCAAGATGGACATGATGTCTCTCAACAGCCAGCTGCTGGATGCCATTCAGCAGAAACTGAACCTCTCGCAGCAGCTTGAGGCTTGGCAGGATGACATGCACAGGGTCATTGACCGGCAGCTGATGGACTCGCACCTGAAGGAACGGAGCCGGCCTCCCGCCACCCTCGCCCGGGCCCCGGGCCTGGGGCGTGGGGACGAGCCCAGCACCGCCGAAGGCAAACGGCTCTTCTCGTTCTTCAGGAAGATTTAAACCGGGAGGAGTCAGGCCAGCGAGGACAGGCACACTGACGCCGACTCAAATAGAGGCGTGGGCCGGGCCCCAGGGCAGCACGTGTGCCCACCGGTCCTGCCGCGCTGGGCCCGGCTCAGCGGCCGCACTGCCCACTCGCCTGGGGGCCGCGTCCTTGGGAGGCCCCGCCGCCTCTGAAGGCAGCTCTCACCGGGGCGGCCCGAGCCATGTCCCTACTGCCGGGCCCGTCCTGGGGTCCACCACCGCGGACCGGGGCTCAGGCTGCTTCCAGAGTGGCTGCCGTGCCCGGCTCCAGGCACTGCTGCCCTTGAGCAGGGAGAGAAGCGGAGGCCCACTCTACGCACCGAGGCCACAGCTGCCCACCGCGGGGGGCCTCCTCCTGCTGGGTACCAGGCCCGGGCCTGGATCCCGTCCTCCCACAGCCCCGGCCCAGGAGGCGGCCCCTCACCCACGTGCATGCACCTCCAGGCCCCGGCCTGTGGGCCTGACAGCTGGCTCTTCGGCCACAGCGGGCCCGGCCACGGCTGAGGCCGTCCCCAGCCTCAGAGGAAGCTGCCTCCCCGCGCTCTGCTGCAGGCCTTCCTCCTCGGCAGGGCCCTCTGCAGGCTCAGCCCTCTCCCCTTCCCGGTGCCGGGCAGAGGGCATTCCAGCCCCCCCAGCCCCCCGCATACCCAAGTTCTCGGCTCGGCCGAGCACGTCCAGGCCACAGGACGGCTCCAAAGGGGTCTGCGCTCAGCCATGCCGCCAGGCAGCATCAGCTCCACAGGGTGGACGTCTCCAGAAACTGCCCACCAGGCCCACGGAAGGTCACCCCAGCAACCTCCCACTCCTGCTCATCCTCAGCAACCGCTTCACCTTCTCTGCTGAGGCCCTGACTCGGGACTCAGAGGCACCGGGCTGAGGCCGCCCTCAAGCTGCTTTACAAGGATCATCTTCCTCCCTCACGGGGAAAGCACAGCAGGGATGAGTGGAAAGAATGTACCTACAGATATGTACAGACGCAGTGCTGTACAGACACAGTGCTGTAATTTTGTATGTAGCAACCATGTAAATACATGTATGGATTTTATAATATACATATTATATATGAATCTATAAAGGCATATTTTTAGAAAAACAGCACACCACTGCTTCTTTTGAAAATAGTCTAAGAATAAAATGAATTTCTACAGAGCTTCCCGCCTCAGTCACTGGGTACCTGGGTGGTGTCTGGGCAGAAGGCAGAGTATAGTTTCTATCCGCTGGCTGGTTATGCAAAGGCAGAGTCCTCCACGCACCTGGGGGGGTCACCTCATATGTTGGCACCAAGTCAGTGGACTCAGCCAGGAAGAGGCGTGCGCACACCCTCCACCCGGAGAGTGAAGGCAGGCATCAGGGACAGCTGTTCTGTGAGCTGTGACCCAAGGTGCCACGTCCACCCTGGCCCTGGGTTCTTGGCCAGCACTACAGCTGCCTGGCTCCAGGCACCAGGCCCCAGCAGCGCCGCTGACCAAGCCCCAGGCAGACCTGATAGCTCAGCAGAAACCTCGAGGTAGAAGAAGTCACTATAGGCACATCCTTCCAGAAGGAGAAACATGGCGCTTCCCC EMBV3_42486 TATTTCCCCCTCTGTACTCCTGTAGTTGGGACTGTTTGTGGAAACAATGCCTTGTGTGTC Gene GeneID:100337021|LOC100337021:XM_002685308:141_cdna Constitutive 0 NULL GeneID:100337021 2 GENE LOC100337021 NULL low-density lipoprotein receptor-related protein 2-like EMBV3_08928 AGCTGCAGAGCCGCTACAGGCAGATGGAGGAGCGCATCACCTGTCCGATTTGCATCGACA Gene GeneID:538270|MIB2:XM_002694125:474_cdna Constitutive 0 NULL GeneID:538270 16 GENE MIB2 NULL mindbomb homolog 2 (Drosophila) EMBV3_35206 CGTGTGCTCGCTTCTTCAATGAATTAGAAACTCCTCCTTATTATGTAACCTCAGACCACG Gene GeneID:532606|TASP1:NM_001034577:14_cdna Constitutive 3 NULL GeneID:532606 13 GENE TASP1 C20orf13 MGC139584 taspase, threonine aspartase, 1 EMBV3_37287 TGCATTCAAGAGCTATGGAAGATGGCTGGTTAAACAGCCTCGGGGGCCGACACGGCTCCC Gene GeneID:100139148|LOC100139148:XM_002691987:5_cdna UTR3_Alt 2 NULL GeneID:100139148 12 GENE LOC100139148 NULL hypothetical protein LOC100139148 EMBV3_37943 GGGCTACAGTCTGTGGGGTCACAAAGAATCGGACTCAACTGAGTGACTAAGAACACAGCA Gene BVT0102_020772 + 0 NULL GK000003.2:30957521-30987501 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172852 TCONS_00172854 TCONS_00172850 TCONS_00172856 TCONS_00172851 TCONS_00172855 TCONS_00172853 1 XLOC_104226 Coding TCONS_00172853 XLOC_104226 Coding Coding CTTNBP2NL 3:30985624-31039275 j TSS128633 4974 1 TCONS_00172853_2 505 0.0973059911540008 5 0.907381174277726 7.24933413859641e-17 2.90834811212027e-05 1.85813750827061e-08 8.97776899098102e-09 4.20251017455652e-07 6.94763986450986e-09 1.07369386745424e-05 2.84008456644866e-13 6.74196338704262e-12 0.000114228913362546 0.000198703347854277 2.73022415920595e-05 3.20329061560603e-14 2.66514586997775e-21 7.15083926122255e-10 0.00678049735101413 3.38032238255797e-62 6.64100562808803e-08 5.1443392566366e-09 8.08742547348914e-05 6.58452760786575e-14 0.000351413771388384 2.01542447960459e-09 0.000211108347245659 1.53635535457684e-08 3.09345466265253e-07 0.000137869274364542 1.75022709499826e-10 9.29701805703582e-05 7.64699376732759e-11 XM_005204156.1 CTTNBP2NL PREDICTED: Bos taurus CTTNBP2 N-terminal like (CTTNBP2NL), 0.0 8686 99.79 0.970647366304785 NM_018704.2 CTTNBP2NL Homo sapiens CTTNBP2 N-terminal like (CTTNBP2NL), mRNA. 0.0 3999 87.91 0.640530759951749 TCONS_00172853_2 sp|Q9P2B4|CT2NL_HUMAN CT2NL_HUMAN CTTNBP2 N-terminal-like protein; 0.0 806 89.90 0.998019801980198 1 coding 1 1 1 1 -0.161172944389806 0.194020196110827 -0.0171018117191633 0.741009644875588 GGGGCGGGGCCTCGAGGGGCTGTGGATGGAGAGGGTGGCGGAGGCGGCAGGGAGAGGAACCTTGAACGCCGGGAAAAGGCTTTCAGGATGAATCTGGAAAAACTCAGCAAGCCAGAACTCCTAACACTATTCAGTATTCTTGAAGGAGAGCTTGAAGCAAGGGACCTCGTTATAGAAGCTTTAAAGGCCCAACACAGAGATACTTTCATTGAAGAACGCTATGGAAAATACAACATCAGTGATCCTTTAATGGCGCTCCAGAGAGACTTTGAAACCCTAAAAGAGAAGAATGATGGCGAGAAGCAGCCAGTGTGCACTAACCCACTCTCAATTCTTAAGGTGGTGATGAAACAGTGCAAGAACATGCAGGAGCGCATGCTGTCGCAGCTGGCTGCTGCTGAGAGCCGGCACCGCAAGACCTTGAAGAAGAAAGGCAAAGGCATGCACAGGACACAGCTGAAGGCGATGATGTCACCTACATGCTGGAGAAGGAGCGAGAGCGGCTGACTCAACAGTTGGAATTTGAAAAGTCTCAAGTGAAAAAGTTTGAAAAAGAGCAGAAGAAGCTCTCCAGTCAGCTGGAAGAGGAGCGCTCCCGCCACAAGCAGCTGTCCTCCATGCTGGTCCGGGAGTGCAAGAAGGCCACCAGCAAGGCCGCGGAGGAGGGCCAGAAGGCGGGAGAGCTGAGCCTGAAGCTGGAGAAGGAGAAGAGCCGAGTGAGCAAGCTGGAGGAAGAGCTGGCCGCCGAGAGGAAGCGGGGCTTGCAGACGGAGGCCCAGGTGGAGAAGCAGCTATCTGAGTTTGACATCGAAAGAGAACAACTGAGAGCAAAGCTGAACCGAGAAGAGAACCGGACCAGAACTCTGAAAGAAGAAATGGAGAGTTTGAAGAAGGTGGTGAAGAATCTGGAGGCTTTGCACCAGCAAAGTGGCCCCAGTGAGCAAGTGAAGAAACCAGTAACCGTGTCTAAAGGCACGGTAACTGAGCCACCCACGCTAGTGTCTGCATTTTGCCAAACAGAGAGTTTTCAGGCAGAGAAAACACATGGGAGCAGCACAGCCAGGGTGACAACCAGCGAGCTGCCTGGCCCCACCACTCCCACTTACTCTTATGCAAAAACCAACGGACATTTTGACCCAGAAATGCAGACTACCAAGGAGTTGATTGCAGGCAGCAATGTAGAAAACCAAGTGCCTCCACGAGAGAAGCCTGTGGAACTGACCCAAGAAAAAGCAGTGGAGAACGGCGGGTGTCCTGTGGGAATAGAGACACCAGGCCCAGCGCCTAGTCATCTGCCTTCCAGCGGGAGCTCACCATCTCCCAGCAGCACTGCCTCTTCCTCTCTCACGTCCTCTCCTTGCTCGTCACCAGTACTAACTAAGCGCTTACTGGGGTCATCAGCTAGCAGCCCTGGCTACCAGTCATCCTACCAAGTAGGGATCAACCAGCGGTTCCATGCAGCTCGGCACAAATTTCAGTCCCAAGCAGATCAGGACCAACAAGCCAGTGGGCTGCAGAGCCCTCCATCCAGAGATCTGTCCCCCACCCTCATAGACAACTCTGCTGCCAAGCAGCTGGCCCGAAACACAGTCACTCAGGTGCTCTCCAGATTCACTAACCAACAAGGACCAATAAAGCCCGTGTCTCCTAACAGCTCTCCCTTTGGCACAGACTACCGAAATCTGGCCAGCACTGTCAATGCGAGAGGTGACACCAACCATTCACCTACTCCAGGAAAAGGGTCCAGTCCTCTGAGCCCTCTGTCTCCAGGGATCAAGTCCCCTACCATCCCCAGAGCTGAGAGAGGAAACCCTCCACCCATCCCACCCAAAAAGCCTGGCCTCACTCCCTCTCCATCCACTACCACGCCCCTGACCAAAACTCACTCCCAGGCGTCCTCTTTGACCACTGCAGAAGACCTTGGCAGCAGCTGCTCTTCTAATGCTGTTGTTGCCAATGGCAAGGATGTTGAGATACTTTTGCCTACCAGCAGCTAGTGCCTAGGAGGGAGTCTCTGCGTTTGACATTCCATCAGATTTCGTCCAGGAGCTCAAGAGTCAAACCGTTGAGTCAGATCATGTTATTTATTTTGATCTTAGCTGAAACCGTCTTATAATACATTTAGTGTGTTTCACCTTTTTGTATTTTATAAGTAGAAACTAAGTAGTTTGGAATTTTATGATTCCCATCTTTGTGCTAAAGCTAGAAGGGCACCTCAAAGACACCTAAGCTTCACAGTCACCATCACGTTATGATGGAGAAAGCTAACTGAGTACCAGGTGGTGATTTGCTGTCTGTCTGGGGACTCAAATCACTCAACACTCATTTTGAATTATGCAGAAGTGGTTCATGCAGATTTTTTTATTCCAGATGAACATGTTTTAAAAGTGCCTGAAATTAGACTGCCATATGAATGTGATTCTGCAGCAGAAGCACAGAATGGATCATTTAACTGCAAAAAAAAAATGAGATCCTCTGTGAATTCTGAATGTTAAAAACCAACACTGCTTTTAATACTCTTTTACTGTTTTAATACAAGCTTTGTGTTCAGAAATAAGGCTGCATACGTAGAATGGGAATGCTAAAGGTGAATGATAACTCACCACAAAGTGAGTTTTGTAGAGCCCTTGAAAACCCCTCCTGAACATTAAGCAGTTGGGGTGCTGATTTTCTTGTACTTTGAAAAAATTTCATCACTCCCAGTTTCCTGCATAAGTTCTTGAATAGAATGAAATCACATCTCCTTCAAAAATGTCTTCAGGCATCTACTGTTGTGTAAGGAACTTCTGATTCCGATTGCTATTACTTGAATAGGAAATGGTTACTCATTCTGTATAAAGGTTTTGCAACAGAATGAGATCTTTATTCTGTAATCAAAAAGCAATAACTTAAAGTTCACCATCTTTGTAATATTATAAGTCAGAATTATACAGATTTTAGCAAATTGTTCTACACTTATTCTCCAAGCTGCCAGCACTTGGTGTCCGTATCTGTGGAGCCAAATTAACTTTTACCTAAGTGAAAGTATACATATATCTGTATAGATACACACCCCTTTACGTGTTTAACATACACACTTAAACACATAAATATTAGTGTGATTGTATCTTTGGAGTTTGCAATATAGTGTAAAGGATGAGTAGAAATGCATGTTAAGATTACCTACCAAAGCAACTAGATGTAGCTGGGACCCAATCAAAGAAAGAATCTTGTCCATGGGGAGGGGGAAATTTCACATGAAATCAGGTCTTCAGCATCATGAAGACAAGGCCAAACCAACCCAGTGTCACAAAGCTCAACTGGTCATATAAATGAGAAAAACAAGTCAGTCACTCACTCAAATGACACGTAACAGCTGGGACCAGTGAGAGCCCTAGCAAAGTGAAGTGCCCATGCCCCGCTGAAAAGGGCACCTCCTGTGCTGCTTCAGCTGCTTGTTGCTATGCAAGAATGCTAGACCAGGGTTACCAGCTCCTAAGATTTTTATGAAATCCAAATTTTAATGAGAAACATTCTCATTTTTAAATATCAAGAACTGATCAAAATATTTTAAAATACTGCTAAACATTTCTGCAGCTGGATTTAGCTCACAAGCTGCCAAGCTGCAGCCTCTTTAATTCTAGAAACTTCTGTCATTTTCCATCACAGTGAGTTTGTGTGGACAAAAGCCTCCAAACTTTCCAATTTGTTGGCTAGCACAACCGACAAACTCCCTAGAGTATAATGACTGTCCACCTCAGACGTGGTGGTTACCTGATTTTGTGTCCACAAGGATGGAGAGATCTCACATACATTCTTCTAGTCAACACTTATTCCAGCAGCCAGGGCGTCCTTGGTGGCTCAGTTGGTAAAGAATCTGCCTGCAATGCGGGAGACCTGCGTTCGATCCCTGGGTTGGGAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTTTTGTCTGGAGAATCCCCTTGGACAGAAGTGCCTGGCGGGCTACAGTCTGTGGGGTCACAAAGAATCGGACTCAACTGAGTGACTAAGAACACAGCAGGACCTCCTGCTATGATTTAAACCTATTTCCTCATAACCCAATATGAGTTGATGGGAGAAAAGCAGGTGATGGAAATCAAGATAAATCACTCCAAAGTACACTGGTGTCTGCACAGTTTGACTAAAGCCAATGCATCAGAAAAAAAATGAAAATACTGTTAATGCCCTAGCATGTCTACCAAGTGATAAAGAGGTTATCTTAAACTTCCCAGAGCAATCATGCATTAAATTTTATTCCCGTGCATTGTCACATGAACTGGAACTTTCCTAAACAGGAGAGGGGGCTATAATCCCAGAGTACTGTTACCTCTCTTGCTTTAAATGGTAATCTTACAAGTTGCATTGTGCTCTTCTTTTGTTAGGGCATAGATATATATATAGAGAGAGATACTATAAGGAAGTTTATTTCTTAGAAAGTGCACTGAATAATGTATTACTTTTACAGTGTAATATGGGGGTGGGGAAGTGCAAAAGAAATGTGTATTTTTGCTAGTTGCCTATCTTCTGAGATAAACAAGCACAATACTGCAATGGATCAAATAATCCAGTTAGGTATTAGAGATTAGGATTTAAGTTTGCCGTAGACTGTGTGTGTGCTAAGTGAAAGTTCCATGATCCACAATTCTGGTCTTAACCCATGTTTCGAGAGCTGTTCCTGGTCAACAGATCATAGTGACGTGCAGCACACAGCACAAGCACTAACTAGTTACTAACATCTGTAAAGCCAAATGTACCGTGCAGAAGTCTTCATCCATTTCTATAGCAGACGACATTAAAACAACTTAAATCACACTGTCTGGGCAAAAAGTAGTCTTGTTTGTACCAAGTGAAGAATGTTGCACAACAGGGCCCAGTTTGTTGGGGAAGGAGCAGATTGGTAAAAAGGGACCACTGGCTCCTGGCTTTAAAAAAAACAAACGAAGATACACGACCCACC EMBV3_15345 CCCCGGCCCGCACCGAAAAGGTGATTGCCAACCCTGACCCTCGCAGTGACCCAGAGCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04132 AAGCTGTGGAAGCAGTCAATCTAGTCTTCTTTCCCCTCTCCATCCCTAGATACCTGGAGA Gene BVT0101_016241 - 0 NULL GK000004.2:28863761-29045449 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10647 CAGACTGAAGGTTATTCTGGCAGCTTTTGTCCCTACCTAAGGGCTGTGAGGGTGGCTTTT Gene GeneID:617377|ZNF408:XM_002693535:145_cdna Constitutive 2 NULL GeneID:617377 15 GENE ZNF408 NULL zinc finger protein 408 EMBV3_05873 CTGCTGGTAGGAGGCTGGCATTTCTGGAACAGGACTTGGCAAAAACAGGAAGCATTCCCA Gene GeneID:508933|CCL27:XM_002689812:126_cdna Constitutive 1 NULL GeneID:508933 8 GENE CCL27 NULL chemokine (C-C motif) ligand 27 EMBV3_41398 CAAGGCAAAGGGGAAGATAGCGATGTACTCAGTATAAATGCAGACGCTTATGACAGCGAC Gene GeneID:515858|C8H9orf82:NM_001038120:11_cdna Constitutive 1 NULL GeneID:515858 8 GENE C8H9orf82 C9orf82 MGC133601 chromosome 9 open reading frame 82 ortholog EMBV3_04052 GGCGGACACCATCTTTTACCCCCATTCTCTTCCTCACGCTGGTTAGTGGATACCATCTTT Gene BVT0102_063969 + 0 NULL GK000008.2:101668234-101881882 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228872 1 XLOC_138604 Coding TCONS_00228872 XLOC_138604 Coding Coding SVEP1 8:101583430-101750608 j TSS170525 10558 1 TCONS_00228872_27 3115 46 0.937120536915963 0.000614771926699615 0.00057567822761723 0.000688592561012956 0.000586639887716088 0.000308942086690343 0.000132544219305305 0.000225007338189843 0.000398076062377354 0.000756620541789364 8.80758967376393e-05 1.98003666673738e-05 8.50308841271897e-06 0.000369819445190579 0.000249251162023954 0.000293215811192158 1.36551717620634e-22 0 0 0.00021022946705434 0.00109557859907794 0.0002281229087199 2.08445955889283e-16 0 0 0.000978530873802587 0.000747001866624778 0.000629001940170852 6.78109114127033e-32 1.17362224671658e-05 9.65410125883844e-06 XM_002705057.3 LOC781282 PREDICTED: Bos taurus sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like (LOC781282), mRNA. 0.0 1.546e+04 99.93 0.813411630990718 NM_153366.3 SVEP1 Homo sapiens sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 (SVEP1), mRNA. 0.0 1.214e+04 86.63 0.95785186588369 TCONS_00228872_27 sp|Q4LDE5|SVEP1_HUMAN SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1; 0.0 5540 85.37 0.999678972712681 0 coding 0 0 0 0 -0.351020555499462 0.220777196577811 -0.136137891304545 0.0410661016790125 GCTAAAGCCTCTTCCTGTCTCTTGAGGGCGGAAGCGGTTTAAGAACTTTTTCTCCATTGGTTGCTCTTTCTCCTTTGGGACCTACAAGCATAAGTCCCACCCACTTCCAGAGCCGAGCAATCTAGGGGTAGCTGCTACTGAGCAGCCACAAAAACTGGGGCACTGGCCATGTTTGAAAGCTCCCCTTTTGGAGGTACTGTGGCTCTAGAGTATAGCAGAGGGAGAGAATATAGATGGTGCCTGTTGGGAGAAAGAAGGAAATAAGAAAAAAGATGGTATCCACTAACCAGCGTGAGGAAGAGAATGAGGGTAAAAGATGGTGTCCGCCAGCCAGCAGGCCTCTGTGTGGGTCTAAACTCAGACGCTTTAAGATGAGCAAATGAACTTGAGTCGTATCAAATCTGGATGCCTCCGGACCCTCTGTCTCTGCGTTGAGCCCCGTGTCAGCTTGCCCATCCGGGACATACAAACCAGAAGGTTCACCGGGAGGAATCAGCACTTGCCTTCCGTGTCCTGATGAAAATCACACCTCTCCACCCGGAAGTACATCCCCTGAAGACTGTGTCTGCAAGGAGGGGTACCAGGCCTCTGGCCAGACCTGCAAAGTTGTCCACTGCCCTGCCCTGAAGCCTCCTGAAAACGGTTACTTTATCCGAAACACTTGCAACAACCACTTCAATGCAGCCTGTGGGGTCCGATGTCACCCTGGGTTTGACCTCGTGGGAAGCAGCATCTTCCTGTGTCTCCCCAGTGGTTTGTGGTCCAGTTCCGAAAGCTCCTGCAGAGTGAGAACATGCCCTCGTCTCCGCCAGCCCAAACATGGCCGCCTCAGCTGTTCAGCTGGAGAAATGTCCTACAGGACCATGTGCTTGGTCACCTGTGATGAAGGCTACAGACTAGAAGGAAGTGCTAGGCTTACCTGTCAAGTGAACGCCCAATGGGATGGTCCAGAGCCCCGGTGTGTGGAACGCTACTGTGCCACCTTTCAGAAGCCCAAAGGTGTTACCCTGTCACCTCCCAACTGTGGCAGGCATCCAGCCAAACCTGGCACGATCTGTCAGCTAAGTTGCCGCCAAGGATTCATTTTATCAGGGGGCAGAGAAGAAGTGAGGTGTACCACCTCTGGAAAATGGAGTGCCAAAGTTCAGACAGCTGCCTGTAAAGATGTGGAAGCTCCTCAGATCAACTGTCCTGCAGACATAGAGGCTGAGACCCAGGAACAGCAAGACTCTGCTAATATCACTTGGCAAATCCCAACAGCTAAAGACAACTCTGGGGAAAAGGTATCAATCCACGTTCATCCAGCTTTTACCCCACCTTATCTTTTCCCAATTGGAGATGTTGCTGTCACATACACGGCAACTGACCCATCCAGCAACCAAGCCAGCTGCACCTTCCATATCAAGGTTATTGATGTAGAGCCACCTAGCATAGACTGGTGCAGGTCCCCACCTCCTGTCCAGGTCTCTGAGAAGGAGCATGCTGTGACCTGGGATGAGCCTCAGTTTTCAGACAACTCAGGGGCCATGTTGACCATCACCAGAAGCCATACACCAGGAGACCTGTTCCCTCAAGGGGAGACGATAGTGCGGTATACAGCCACTGACCCCTCAGGCAATAACAGAACATGTGACATCCACATTGTCGTAAAAGGTTCCCCCTGTGAAGTTCCATTTACACCTGTAAATGGGGATTTTGTATGTACTCAAGATAGTACTGGTGTTAACTGCTCATTAAGTTGCTTAGAGGGCTATGATTTCACAGAAGGATCTACTGACAAGTATTATTGTGCTTATGAAGATGGTATCTGGAAACCACCATATTCCACTGAATGGCCAGACTGTGCTATAAAACGTTTTGCAAATCACGGGTACAAGTCCTTTGAGATGCTGTACAAAGCAACTCGCTGTGATGACACAGATCTGTTGAAGAAATTTTCTGAAGCATTTGAGACCACCCTGGGGAAAATGGTCCCGTCATTTTGTAGTGATGCTGATGACATTGACTGCAGACTGGAGGACTTGACCAAAAAATACTGCCTTGAATATAATTATGACTATGAAAATGGCTTTGCAATCGGCCCTGGTGGCTGGAGTGCAGCCAACAGGCTGGATTACTCTTACGGTGACTTCCAGGACACAGTGCGAGAAACACCCACGGGTGCTGGCAAAGCCAGGTCTTCCCGGATTGAAAGAAGTGCCCCATTATCCGACCACAAAATTAGGTTAATTTTTAACATCACAGCTAGTGTGCCATTACCCGATGAGAGAAACGATACCCTTGAATTGGAAAATCAGCAGCGACTCATTAAGACGTTGGAAACTATCACAAATCGACTGAAAAGGACCCTTACTAAGGAGCCCATGTATTCCTTTCAGCTTGCCTCTGAAATGCTTGTAGCTGACAGCAACTCCTTAGAAACAGAAAAGGCTTTCCTCTTCTGCAGACCGGGCTCCGTGCTGAGAGGCCGAATGTGTGTCAACTGCCCTTTGGGAACCTACTATTCCCTGGAGCATTCTGTCTGTGAGAGTTGCTTGATGGGCTCCTATCAAGATGAAGAAGGGCAGCTGGAGTGCAAACCCTGTCCAACTGGGACTTACACCGAATATCTCCATTCAAGGAGCAGCTCAGAATGCAAAGCTCAGTGTAAACAAGGCACCTACTCATCAAATGGGCTTGAAACATGCGAATCGTGTCCGCTGGGCAGCTATCAGCCAGCATTTGGTTCCCGGGGGTGCCTCTCATGTCCAGAAAACACTTCAACTGTGAAGAGAGGAGCCGTGGACATTTCTGCTTGTGGAGTGCCTTGTCCAGTGGGAGAATTCTCTCGTTCTGGGTTAATGCCCTGTTATCCATGTCCCCAAGACTACTACCAACCCAATCCAGGGAAGTCCTTCTGTTTATCGTGTCCCTTTTATGGAACTACAACCATCACGGGTGCCAGATCCATCACAGATTGTTCCAGCTTTAGTTCAACTTTCTCAGCAGCAGAGGAAAGTGCAGTGCTTCTTGCTTCTCCTGGACATGTCAAAAAGAAGTATGAAGTCAGCAGTCAGGTTTTCCATGAATGTTTCTTAAACCCTTGCTACAATGGTGGAACCTGCCAGCAGCTGGGCCGTGGTTATGTGTGTGTCTGTCTGCCTGGATATACAGGCTTAAAATGTGAGATAGACATTGATGAATGCAGCTCACTGCCCTGCCACAACAATGGAATTTGTAAAGACCGAGTTGGAGAATTCATTTGTGAATGCCCATCTGGTTATACAGGTCAGCTGTGTGAAGACAATGTAAATGAGTGCATCTCCAGTCCTTGTTTAAATAAAGGAACTTGCGTTGATGGCCTGGCTGGTTATCACTGCACATGTGTGAAAGGATACATGGGCCTACACTGTGAAACAGAAGTCAATGAATGCCAGTCAAGCCCATGTTTAAATAACGCAGTCTGTGAAGATCAGCTTGGGGGGTTCTTGTGCAAATGCCCACCTGGATTTTTGGGCACCCGGTGTGACATAAACATGGATGAGTGTCTCAGCCAACCATGCAAAAATGGAGCTACCTGCAAGGACGGTGCCAATGGCTTCAGGTGCCAGTGTGCAGCAGGCTTCACGGGGACACACTGTGAGCTGAACATCGACGAATGTCAGTCTAACCCCTGTAAAAATCAGGCCACCTGTGTGGATGAATTAAACGCATACAGCTGTAAATGTCAGCCAGGATTTTCAGGCAGCAGGTGTGAAACAGAACAGTCAGCAGGCTTTAACCTGGATTTTGAAGTTTCTGGCATTTATGGTTACATCATGCTGGATGGTGTCCTTCCGACCCTCCATGCTGTGACCTGCACGTTCTGGATGAAATCGTCTGACGACATTAATTACGGGACACCGATCTCCTATGCCCTGGAGAATGGCAGTGACAATACCTTCCTCCTAACCGATTATAATGGCTGGGTTCTTTATGTAAATGGCAAGGAAAAAATAACAGACTGTCCCTCTGTGAATGACGGTAATTGGCATCACATTGCCATCACTTGGACGAGTACTGGTGGAGCCTGGAAAGTCTACATCGATGGGAACTTATCTGACGGTGGCATGGGCCTCTCTATTGGATCACCCATCCCTGGTGGTGGTGCATTGGTTATTGGGCAAGAACAAGACAAAAAAGGAGAGGGATTCAACCCGGCTGAGTCTTTTGTGGGCTCCATAAGCCAGCTCAACCTCTGGGACTATGTCCTGTCTCCACAGCAGGTGAAATCGCTGGCCACCTCATGCCCAGAGGAACTCAGTAAAGGAAACGTGCTAGCCTGGCCTGATTTCCTGTCAGGAATTGTGGGGAGAGTGAAGATCAATCCGAAGAGCATATTCTGTTCAGATTGCCCGTCTTTAGAAGGATCAGTACCTCATCTGCGAACTGCATCAAGAGACGTAAAGCCAGGCTCCAAAATCAGTCTGTTCTGTGATCCAGGCTTCCAGATGGTCGGGAACTCTGTGCAGTATTGCCTGAATCAAGGACAGTGGACACAACCATTGCCTCGCTGTGAACGCATTAGCTGTGGGGTGCCACCCCCTTTGGAGAATGGCTTCTATTCAGCTGAGGACTTCCATGCTGGCAGCACAGTGACCTACCAATGCAACAATGGCTACTATTTGTTGGGTGATTCAAGGATGTTCTGTACGGATAATGGGAGCTGGAATGGCATTTCACCATCGTGTCTTGATGTCGATGAATGTGCAGTTGGGTCAGACTGCAGTGAGCACGCCTCCTGCCTGAATACAAATGGATCCTACGTCTGCTCATGTATCCCGCCCTACACAGGAGATGGGAAAAACTGTGCAGAACCCATAAAATGCAAGACTCCAGGAAATCCAGAAAACGGCCACTCTTCTGGAGAGACTTATACCGTGGGTGCCGAGGTCACGTTTTCATGTGAAGAAGGATACCAGCTGGTGGGGGCGGCCAGAATCACATGTTTGGAGTCTGGAGAATGGAGTCATCTGATACCATATTGTGAAGCTGTTTCCTGTGGTGCACCAGCTCTCCCAGAAAATGGTGGTGTTGATGGATCTGCATTTACCTATGGCAATAAAGTAATATATAGATGTAATAAAGGATATACTCTGGAGGGTGAGAAAGAATCATCGTGTCTTGCTAGTGGTTCTTGGAGTCAGTCTCCTCCTGTGTGTGAACTGGTCAAGTGTTCTAGCCCCGAAGATGTAAATCACGGGAACTATATTTTGAGTGGGCTTACCTATCTTTCTACTGCATCGTATTCATGTGATAATGGATACAGTTTGCAGGGCCCTTCGGTCATTGAATGCTCGGCCTCAGGCAGCTGGGATAGAGCGCCACCTACCTGCCATCTTGTCTCCTGCGGAGAGCCGCCGGCCATCAAAGATGCTGTCACCACAGGGAGTAACTTCACCTTTGGGAACACTGTCACTTACGCTTGCAGAGAAGGCTACACCCTTGCTGGTCCTGACACCATTGAGTGCCTGGCCAGCGGCAAGTGGAGCAGAAGTGACCAGCAATGTCTGGCCGTCTCCTGTGACGAGCCGCCCAGCGTGGAGCACGCGTCCCCAGAGACTGCCCATCGGCTGTTTGGAGACATTGCGTTCTACTATTGCTCAGATGGCTACAGCCTGGCAGACAACTCCCAGCTCCTCTGCAATGCCCAGGGCAAGTGGGTTCCTCCGGAAGGTCAGGCCATGCCCCGTTGTATAGCTCATTTCTGTGAAAAACCCCCTGCTGTTTCCTACAGCATCCTGGAATCTGTGAGCAAAGCAAAATTTGCAGCAGGCTCAGTTGTGAGCTTCAAGTGCATGGAGGGTTTTGTACTGAATACCTCAGCAAAGATTGAGTGTCTGCGAGGTGGGCAGTGGAGCCCTTCCCCCATGTCCATCCAGTGCATCCCCGTGCGCTGTGGGGAGCCGCCCAGAATCCTGAATGGCTATGCAATTGGATCAAACTACAGTTTTGGAGCCATGGTGGCTTACAGCTGCAACAGGGGCTTCTACATCAAAGGGGAGAAGAAGAGTGCCTGCGAAGCCACGGGGCGGTGGGGCAGCCCCACACCCACGTGCCACCCCGTGTCCTGCGCTGAACCGCCGAAGGTTGAGAACGGCTTTCTGGAGCATACAACTGGCAGGACCTTTGAGAGTGAAGTGAGGTACCAGTGTAACCCAGGCTATAAGTCAGTTGGAAGTCCTGTGTTTGTCTGCCAAGCCAATCGCCACTGGCACAGTGAATCCCCTCTGGCATGCATCCCTCTCAACTGTGGGAAACCTCCCCCGATCCAGAATGGCTACACAAAAGGAGAAAATTTTGAAGTAGGGGCCAAGGTTCACTTTTTCTGTAATGAGGGTTACGAGCTTATCGGTGAACATTCTTGGACATGCCTGAAATCTGGCAAATGGAATAAGAAGCCGAACCAAAAGTGTGTGCCTGCCAAGTGCCCAGAGCCACCCCTCTTGGAGAACCAGCTCGTATTGAAGGAGTTGACCACGGAGGTGGGAGTGGTGACATTTTCCTGTAAGGAAGGGCACGTCCTCCAGGGCCGCTCTGTCCTGAGATGCTTGCCATCCCAGCAGTGGAATGATTCTTTTCCTGTTTGTAAGATGGTTCTGTGCCTCCCACCTCCCCTCATTTCCTTCGGCGTCCCTGCTCCTTCTTCTGCTCTTCATTTTGGAAGTACTGTCAAGTATTCTTGTGTGGATGGGTTTTTCTTAAAAGGAGATCCTACCACCTCCTGCCAAGCTGATGGTACCTGGAGCTCTCCACTGCCGGAATGCGTGCCAGTAGAATGCCCGCAGCCTGAGGAAATCCTCAATGGCATCATCGATGTGCAAGGTCTTGCCTACCTGAGCACAGCTTTGTATACATGCAAGCCAGGCTTTGAGTTGGTGGGCAATACCACCACTCTTTGTGGAGAAAATGGTCACTGGCTCGGGAAAAAACCAACCTGTAAACCCATTGAGTGCCCAAAGCCCAAGGAGATTTTGAACGGCAAATTGTCTTACACAAAGCTACACTACGGGCAAACCATTACATACTCTTGTGACCGAGGCTTCAGGCTCGAAGGTCCCAAAGCCTTGACTTGTTTAGAGACAGGAGATTGGGATGTGGACGTCCCATCTTGCAATGCCATCCACTGTGATCCCCCACAACCCATTGAGAACGGGTTCGTAGAAGGTGCAGATTACAGCTACGGTGCCATGATCATCTACAGCTGCTTCCCTGGGTTCCAGGTAGCTGGTCACGCCATGCAGACCTGTGAAGAGTCGGGATGGTCAAGCTCCATCCCGACGTGTGTACCCATCGACTGTGGTCTCCCCCCTCACATTGATTTTGGAGACTCTACTGTGGTCAGAGATGGTCAGGGATATTTTAACCAAGAAGACGACATGATGGAAGTTCCGCATGTGACTCCTCACCCCCCTCATCCTCTGGGAACAGTGGCTAAAATCTGGGGAAACACGAAGGGGTCTCCTGCTATGCATTCGGCAAAATTTCCATACAACACCCTGGTTTCATACAGCTGTAATCCGGGATACGAACTCCTGGGGAACGCTGTGCTGATCTGCCAGGAAGATGGAACTTGGAATGGCAGTGCACCGTCATGCATTTCAATGGAATGTGACCTGCCTGTTGCTCCTGAAAATGGCTTTCTGCATGTTACAGAAACGACCACGGGCAGTGCCGTCCAGTATAGCTGCAAACCTGGGCACACTCTGGTGGGCTCTGACCTCAGACTTTGTCTAAGGAACAGAGAATGGAGCGGTGCTTCCCCACGCTGTGAGGCCATCTCATGCCCCAAACCAAATCCAGTTACGGATGGCTCCATCCGAGGAAGCAACTACTCGTACCTGAGCGTGTTGTACTATGAGTGTAATTCTGGGTATGTGCTGAATGGCAGCAGCAGGAGAACATGCCAAGAAGATAAAACGTGGGATGGAGATGAGCCCGTTTGTATTCCTGTGGACTGTGGTTCACCCCCAAGCTCAGCCAACGGCCAGGTAAAGGGAGAGGAATATACCTTCCAGAAAGAGGTTCAGTACACTTGCAACACAGGCTTCTTGCTGGAGGGGGCCAGCAGCCGTGTTTGTCTTGCTGATGGAAGTTGGAGTGGAAACACTCCCATCTGCGTGCCCGTCCGGTGTGCTCCCCCATCACAGGTGGCAAATGGGGTGATGGATGGCCTGGACTATGGCTTCGGGAAGGAAGTGGTGTTCCACTGTCAGGATGGGTATGCGTTACACGGGGCCCCCAAACTCACCTGTCAGTCAAATGGTAACTGGGATGCCCAGGTTCCTTTCTGTAAACCAGTCAACTGCAGCCCTCCTGAAGATCTTGACCGTGGCTTCCCTAATGGCTTTTCCCTTTATCGTGGGGGGCAGATAGAGTACCAGTGCTTTCCTGGTTATAAGCTCCATGGAAGTCCTTCAAGAAAGTGTCTCTCTAATAGCTCCTGGAGTGGCAGCCCCCCTTCCTGCTTGCCTTGCAAGTGCTCCCCACCAACCATTCAGAGTGGGGCTGTTAATGGGACAGATTTCAGTTGTGGAAAGGCAGCTCAGATTCGGTGCTTCAAAGGCTTCCAACTCCTGGGACTGTCTGAGATCACCTGTGAAGCCGATGGCCAGTGGAGCTCTGACTTCCCACGCTGTGAACACCCTTCTTGTGGTTCTCCTCCAACGATACCAAATGCGTTCATTGTTGAGAGGGGTTCATTGGAGGAAAATGTAATAACTTACACCTGCAAGCCTGGGTATGTCATCCAAGGCAGTTCAGATCTGATTTGTACAGAGAAAGGGACATGGAGCCAGCCTTACCCAGTCTGTGAGCCCCTGTCCTGTGGACCTCCACCATCTGTCTCCAATGCAGTGGCAACTGGAGAAGCACACACCTATGAAAGTCAAGTGAGGCTCAGGTGTCTAGAAGGTTATGTGATGGATACAGATATAGACACATTCACCTGTCAGAAAGACGGTCATTGGTTCCCTGAGACAATTTCTTGCAGTCCTAAAAAATGTCCTCTGCCAACAAATGTAACACATATACTTGTTCATGGAGATGATTTCAGTGTGAATAAGCAAGTGTCTGTGTCATGTGTGGAAGGGTATACCTATGAGGGAGTTAATACATCAACATGTCAGCTTGATGGCACCTGGGAGCCCCCGTTTTCTGATGAATCCTGCAGTCCAATTTCTTGTGGGAAACCTGAAAGTCCAGAACATGGATTTGTGTTTGGCAGTGAATACAACTTTGAAAGCACGATTACTTATCACTGTGAAACTGGCTATGAATTAGAGGGGAGCAGAGAACGGGTGTGTCAGGAGAACGGACAGTGGACTGGAGGGGTGGCGACATGCAAAAAGATCATGTGTGAAGCTCCACTTAAGTTTCTGAATGGGAAAGCTGAAGTTGAAAACAGTACCGCTGGGCCCAGCGTGATATACTCCTGCAACAGAGGCTACAGCCTTGAAGGGGCGCCTGAGGCTTCCTGCACAGAAAATGGGACTTGGAGCCACCCTGTTCCTCTCTGCAAACCAAATCCATGCCCTGTCCCATTTGTGATCCCTGAGAATGCTGTGCTTTCTGAAAAGGAGTTCTATGTCGATCAAAACGTGTCTATCAAGTGTAGGGAAGGCTTCCTGCTCCGGGGCCAGAGCACCATCACATGCAACCCCGACGAGACGTGGACACAGACAAGCGCCAAATGTGAAAAAATCTCATGTGGTCCGCCAACTCATGTAGAAAATGCAATTGCCCGAGGCGTACATTATCAGTATGGGGACGTGATCACCTACTCCTGTTACAGTGGATACATGCTGGAGGGTTCCCTGAGGAGTGTTTGCCTAGAGAATGGAACCTGGACATCACCTCCTGTCTGCAGAGCTGTCTGTCGATTCCCATGTCAGAATGGAGGGATCTGCCAACGCCCAAATGCTTGTTCCTGTCCAGATGGCTGGATGGGTCGCCTCTGTGAAGAGCCGATCTGCATTCTTCCCTGTCTGAACGGCGGTCGCTGTGTGGCCCCTTATCAATGTGACTGCTCACCTGGCTGGACAGGGTCCCGCTGTCATACAGCTGTCTGCCAGTCTCCCTGCTTAAATGGTGGAAAATGCGTAAGACCAAACCGATGCCATTGTCTCTCGGCATGGACAGGACATGACTGTTCCAGGAAAAGGAGGACTGGGTTTTAACCACCGCACAACCAACCAGCTCTCCTGAAATGCAGGATCATCTCTTCCTGGCAGTCCTGGACATCACACAATTTACGTGAAGACTTTCCGACACGGTGCTGGGTCTTGTCTCGTTTCAGTCGACTTGTTACTTTGGGTTGACCCTTTTATTTTGTGTTATAGTTTGTTATTTCTTGTGACATACCTTCTTACATGTTTTCATTTTTAAATATGCCTGTATTTTCTATATAAAAATATATTAAATAGATGCTGCTCCACTCTCACAAAATGTACATACTCTGCTGTCTATTGGAAGGTTCCTGGTATACATTTTTATTCAGTTACTTAAAATGATTTTTCAATTAAAATATATTTTGCTACTA EMBV3_10004 ATACAATGGGGCAAAGATACCCTCTTCAATAAGCGGTGCTGGGAAAACTGGACAGCTCCC Gene BVT0102_031992 + 0 NULL GK000006.2:21052979-21174709 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202685 TCONS_00202682 TCONS_00202680 TCONS_00202684 1 XLOC_124020 Coding TCONS_00202682 XLOC_124020 Coding Coding - 6:21116223-21142470 - TSS152030 2719 1 TCONS_00202682_8 104 0.951452739977933 3 0.89651756458127 0.00469593952017705 0.0025651037261334 0.00438562108363431 0.00326083734560367 0.00336575413569533 0.00169293856447619 0.0013878456516624 0.00130561579839541 0.00300441682821248 0.000433112297206451 1.58801289738341e-05 2.87423033037694e-09 3.91125902689653e-05 0.00051350741387069 0.000372252539467495 3.95603885310363e-12 0 0 0.00316505501432663 0.0037278619947104 0.000133403774006772 0 6.32110148652257e-11 0 0.00394947459153923 0.00229174327838892 0.00165356219555823 3.65422060192104e-10 2.77240800031146e-41 4.51020994163735e-05 XM_002701174.3 LOC100335269 PREDICTED: Bos taurus putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase-like (LOC100335269), mRNA. 0.0 1180 84.31 0.398308201544686 NM_020729.2 ODF2L Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), 2e-153 547 72.18 0.402353806546524 TCONS_00202682_8 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-26 105 52.00 0.942307692307692 0 noncoding AGAGAAACCTTCCCCGTGCCCTTGCTAGTTTCAAAGATGGAGGGGGAGGCTATAAGGCAAGGTTGAGGTCGGCTTCTAGAAACAGAAAGCCCCAGACAGCTCAAGAAACAGGAGCCTTAGTCCGACAAGGAACTGAACTGATTGAAAAGTGAAAAGTTAGTCGCACAGGTGGAAGGACTCTTCGATCCCATGGACTGTAGCCCGCCAAGTCCTCTGTCCTTGGAATTCCCGGAGACAAGACTACTGGAGTTGGTTGCCATTTCTTTCTCCATACAACCTGAATAACTCTGAAAGTGGATTCATCCTTAGAGCTTCTAGAAGAAGTGCGGCCCTGATGACAGCTTGATTCTGGCCTCACGAAGACTCCAAGCAGAGAACCAGCTGAGCCACGCCGGGTCCAGAGGAGAGGCCATGTGAGGACATAGCTAGAAGGCAGCTGTCTGCAAGCCAGGAAGACTACTCTTACCAGTACTTGTCCTGCTCTCCTTGATCTTGGGCTTCTACTAGCCTCCATAATGAACTCTTAAAACTGGCCAGATGAGATAAATGCAACCCGGACTCAGGAAGGTTGGAAGGAGGGAGAGAAGATTCCCCCCAGGACACAGGGCTATTGGAGAGGAAAGTGTTGCTCCTCGTAGGTATCTGAGGCCCACACTCTGCCATGCAGCCTCTTTCACTTCCTCCCAGCAGCCAGTCCTCTCAGCTGTCCCTTGACTGAGGGCCAGGTCTGGGGAAGTTGAGCCAGGAGCACCACTTTTCTGCAGTGACACACAAGAGGACACACAAGCATCTTGAACTCTCCCCTCTGGGAGGAGTATGGTACCTGGACCAGGGCTGAGTGGGTGAGACGCTTTCCCTGCTGAGATGGGCTCTGGCCAGCCATTCACAATTTACACCGTGGTGCCTCCCTCCAGCCTGGTCATGGTCTGCCCTGAGATGCCACCTGGCGTGCTTGTGTGACCCCAGTCCTCCTCCACGACCTGCTTGGAACAGAGGGGAACTGTAATCAGAGGGTGGAAGGCAGGTAGGAGCTGGGTGGGGCCAGGACACCAGGGCTCTGAGGTGCCATGAGCCAGGCTGCAAGTGCTCAGCACATTTTCTATTGTCCCACTGGACTTCATTTACAAAAAGTACTCAAAAAGTTTAAGATTTTCCAGTCTTGAGAAAGAATGAAGCTGGAAGAATCAACTTCCTGGGTTCAGACTATACTACAAAGCTACAGTCATCAAGATAGTATGGACTAGCACAAAACCAGAAATATAGACCGATGGAAGAAGACAGAGAGCCCAAAGATAAACCCACACACCTATGGATAACTTATTTTTGACAAAGCTGGCAAGAATATACAATGGGGCAAAGATACCCTCTTCAATAAGTGGTGCTGGGAAAACTGGACAGCTCCATGCAAAAGAATGAAATTAGAACACTTCCTAACACCATACACAAATATAAACTCAAAATGGATCAAAGACCTAAATGGAAGACCAGAAACTATAAAACTCTTAGAGGAAAACAGAGGCAGAACACTTGATGACATAAAGCAAGATTTTCTATGACCCACCTCCTAGACTAATGAAAATAAAAATAAACAAGTGGGACCTAGTTAAACTTAAAAGCTTTTGCATAGCAAAGGAAACTATAAAAAGGTGAAAGGACACCCCTCAGAATGGGAGAAAATAAGAGCAAATAACTGACAATGATTAATTTCCAAAATATACAAGCAGCTCATACAACTGAATACCAGGAAAACAAAAGACCCAGTCAAAAAGTGAGGAAAAGACCTAAACAGACAGTTCTCTAAAGAAGACATACAGATGACTAAAAACACATGAAAAGATGCTCAACATCCCTCATTGTTGGAGAAATGTATATCAAAAGTACAATGAGATACCACCTCACACCAGTCAGAATGGCCATCATCAAAAAGCCTACAAACAATAAATGCTGAAGAGGGTGTGGAGAAAAGGGAATCCTCTTGCATTGCTGGTGGGAATGTAAATTGATACAGCCAGTATGGAAGATGGTATGGAGATTCCTTAAAAAGTTAGGAATAAAACCACCATATGACCCAGCCAATCCCACTCCTAGGCACATACCCTGAGGAAACCAAAATTGAAAAAGACACATGTACCCCAATGTTCATTGTAGCACTATTTACAATAGCTAGAACAAGGAAGCAACCTAGATGTCCATTGGAAGATGAAGGGATAAAGAAGCTGTGGTACATATATACAATGGAATACTACTCAGCCATAAAAAGGAAGGCATTTGAGTCAGTTCTAATGAGGTGCAGGAATCTAGAGCCTATCATGCGGAGTGAAGTAAGTCAGAAAGAGAAATATAAATGTCATATACTGACACATATATATGGCATCTAGAAAGATGATACTGATGAATTTATTCTCAGGACAGCCATGGAGAAACAGACATAGAGAACAGACTTATGGACACAGGGTGAGGGGAGGAAGGAGAGGGTGAGCTGTATGGAGAGAGTAACATGGACATTTACAATACCATATGTAAAATAGATAGCCAATGGGAATTTTCTGTATGACTCAGGGAACTCAAACAGGGGCTCTGTGACCATCTAGAAGGCTGGGATGGGGAGGGAAATGGGAAGGAGGTTCGGGAGGGAGGGGACATGGATACCCCTATGGCTGATTCTTGTTGATGTATGACTGAACAGAAAACCACTAAATTCTGTAATGCAATTATCCTT TCONS_00204685 r 3' 27656 TCONS_00202671 TCONS_00202672 TCONS_00202674 TCONS_00202675 TCONS_00202676 s 3' 33329 EMBV3_41577 CCCGCCCACTGCCCAAGAACTTCCTTCTCATCATGGATATCCGGTTCATGGATCTTAAGT Gene GeneID:506507|CLP1:NM_001081713:10_cdna Constitutive 0 NULL GeneID:506507 15 GENE CLP1 MGC142985 CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) EMBV3_19396 CTTTGATGGTAACCGTGTGTTCCAAGCACAGATGAAGCTCTGGGGGGTCATAGACGTGGA Gene GeneID:539945|ITGB1BP2:XM_002700021:97_cdna Constitutive 0 NULL GeneID:539945 X GENE ITGB1BP2 NULL integrin beta 1 binding protein (melusin) 2 EMBV3_41669 TGCCTACGGAAGCAACATCTTCATGTATGTGAGACCCAGCCAGAGTCATTCCCTGCAATT Gene GeneID:504490|LOC504490:XM_002699110:152_cdna Constitutive 0 NULL GeneID:504490 29 GENE LOC504490 NULL similar to Olfactory receptor 6M1 (Olfactory receptor OR11-271) EMBV3_08689 ATTTTGATGGTTGGTTCAAGACCCGGAGGAAGGAAATGACCCAGAAACTGGAGGCACTCC Gene GeneID:537662|LOC537662:XM_002696997:377_cdna Constitutive 0 NULL GeneID:537662 22 GENE LOC537662 NULL similar to Protein FAM116A EMBV3_37525 TGTGATCCCCGCCAAGCCCAAACCCAAGCCCAAGTCCAGTAGCCAGAACAGCTCGATGCT Gene GeneID:100298623|LOC100298623:XM_002694854:790_cdna Constitutive 0 NULL GeneID:100298623 18 GENE LOC100298623 NULL similar to scratch homolog 1, zinc finger protein EMBV3_09150 TTGCTCAAACCATCCTCTGCTGTGAAATCGGACAGGTATGGGGGACTTGTGTTCGACTTG Gene GeneID:513552|TMEM186:NM_001014919:156_cdna Constitutive 0 NULL GeneID:513552 25 GENE TMEM186 DKFZp564K2062 MGC139605 transmembrane protein 186 EMBV3_36499 CTTCCAATGCAAGGGGTGCAAGTTCGATCCTTGGTCAGGGAAGCTAAGATCCAGCATGCC Gene GeneID:504278|ABCA9:NM_001101837:13_cdna Constitutive 0 NULL GeneID:504278 19 GENE ABCA9 MGC151508 ATP-binding cassette, sub-family A (ABC1), member 9 EMBV3_35986 TTCAGTCGCAAGTTACTCAGGTGATACAGGGTCCTGAACGAGGTGGTGATCGACAGAGGC Variant GeneID:513419|NADK:NM_001034445:103_cdna 696^850 1 EMBV3_03895 GeneID:513419 16 GENE NADK MGC128269 NAD kinase EMBV3_10984 CAGCTTTGACCACAATTATTTGAAGCCCATCCTCACGCACAGTGGACCCCCATTAACCAC Gene GeneID:522505|SLC9A7:XM_002700063:34_cdna Constitutive 0 NULL GeneID:522505 X GENE SLC9A7 NULL solute carrier family 9 (sodium/hydrogen exchanger), member 7 EMBV3_03934 AGTGTCTGCTGATCCAGACAAGAATGGTGAAATACTGACAATCTCAGATCCAAGCCCTGC Gene GeneID:317657|MYL1:NM_001079578:20_cdna UTR3_Alt 2 NULL GeneID:317657 2 GENE MYL1 MGC155238 myosin, light chain 1, alkali; skeletal, fast EMBV3_25691 GCTTCCTTCTCTGCTCAGAACTTGGTAGGTTGGGCTCAACAATCCAGGGGCAACTTTCAA Gene BVT0102_349238 + 1 EMBV3_10964 GK000015.2:72478870-72759821 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24581 GATGACTGCAATATGCATGAGCACTGAAGGTCTTAGGACAAGTCCATTTTTCCATTAAGG Gene BVT0102_357887 + 0 NULL GK000014.2:1332363-1372655 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054193 1 XLOC_032002 NonCoding TCONS_00054193 XLOC_032002 NonCoding NonCoding - 14:1369410-1370069 - TSS39870 659 2 TCONS_00054193_2 40 0.637329286798179 1 0 2.06459596543903e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.01565364938242e-05 2.51931451947076e-05 0.00201793466107067 0 0 0 0.000213949497604368 6.96057693489561e-05 0.000712304890871596 0 0 0 0 0 0 XM_005222374.1 CCR8 PREDICTED: Bos taurus chemokine (C-C motif) receptor 8 (CCR8), 3e-06 57.2 74.51 0.150227617602428 XR_168653.1 Gm6182 PREDICTED: Mus musculus predicted gene 6182 (Gm6182), misc_RNA. 9e-12 75.2 73.85 0.192716236722307 0 noncoding 0 0 0 0 -0.18600821613054 0.386405426779962 0.0331619675314783 0.497695138311746 GGTTTGTTTAATAAAACTTCAAAGGACAGTTAATCTTCATCTTATATAAACCATTTCAGAGAACAGAAAAGAAGCAAAGTTACACAATTATTTTACAAGACTTATTTAGTTGTGACACCAAAACCAGACAAGATCAGCACAAAAAGAGAAATTTAAAAATCACTCTTGCTTATAAACATAGGTGGAATGACCACTGTAATTTCCAGTTAAATGGACTAAAAATTTCTCTTTTGTGCTTAAAACATTGTTTATAAACATAGATGGAAATATTCTAAATAAAATATAAGCAAACCCAGTCCAATGGTGTATTTAAAAAGAATGATTCCAAAATAGTACAAGGATAGTTAAATATTAGAAGATCTATCAATGTAATTCATGAAATTAACAGATTTAAGAAGAAAGCCACATGATCTTTCTGTGGATGCAGAAAACACATTTGATAAAGGTCAACACTCATTCATGACAGACTCGAAATAGAAGGAAACTTCCTTAATGGAAAAATGGACTTGTCCTAAGACCTTCAGTGCTCATGCATATTGCAGTCATCATCTGTATCCTTACAAGCCAGAAGCAGCTTGTAAGGATACTTCACATCAAAGCTTGACTTTGATGTGAAACCAGCAACATGTTAGGCTTCTTATCTGATTCTTGGTAGTATG TCONS_00052499 TCONS_00052497 TCONS_00052498 . 3' 28579 TCONS_00052499 TCONS_00052497 TCONS_00052498 . 3' 29237 EMBV3_25250 TCCGGTGTGCAGAGGAATTGGAAACTGCCGGGTGAATCTGTAGGGTGGTTGCAAGGATTA Gene BVV0102_416097 + 0 NULL GK000030.2:92650331-92773820 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38002 AGAGTGTCTGTGTCACGCTGGTGCTTGGATCCTGGGTCATTGCTTGTGCTTGTGCTCTTT Gene GeneID:514505|LOC514505:XM_002683725:5_cdna Constitutive 0 NULL GeneID:514505 11 GENE LOC514505 NULL similar to Olfactory receptor 1J1 (Olfactory receptor OR9-18) EMBV3_11131 CTGTACCCAGGACACTTCCCCTGTGAAATCACTACCTTAGGAGCAAACCATTCTGAGTGC Gene BVT0102_013902 + 0 NULL GK000002.2:136317033-136317924 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107054 TCONS_00107053 TCONS_00107051 TCONS_00104254 TCONS_00107052 TCONS_00104255 TCONS_00107050 2 XLOC_062972 XLOC_062332 Coding TCONS_00104255 XLOC_062332 NonCoding Coding SPATA21 2:136315938-136318005 j TSS77246 1941 4 TCONS_00104255_2 67 2 0.0614714424007744 0.0017627423654858 0.000332722124938922 0.00189962595043677 0.000405799591511582 0.00221526704174944 8.58633959344666e-05 0.000486990436315533 0.000459477137289665 0.000781401561399844 0.000149352066826213 6.53993869847262e-05 6.23258887745501e-05 0.000206661849854964 0.000296806940964587 0.000317953886399495 0.00178002172611695 0.00147472559422108 0.000150079552061557 0.000993859732614402 0.000864490125020785 0.000216352490050245 0.00133712628768406 0.000528655448422164 8.94719889265002e-05 0.00296721521035742 0.00119931774876196 0.000940106185102611 6.96892862612109e-05 0.000182219870144779 9.51202633669702e-05 NM_001114608.2 SZRD1 Bos taurus SUZ RNA binding domain containing 1 (SZRD1), transcript 5e-33 147 100.00 0.0412158681092221 NR_073500.1 SZRD1 Homo sapiens SUZ RNA binding domain containing 1 (SZRD1), 0.0 886 77.77 0.590417310664606 0 noncoding 0 0 1 0 0.0127310730069178 0.930828437618447 0.0516480945532788 0.303711704624627 NNTGGGAGGTCTGAGGCCTGGCTCGGGGGTCAGGGAGGAGCTGGGGAAGGGGACAGAACCACGGAGGCAGAAAGGGGCAGCAGCCTCAGGTTTCTGCCCCCTTCACCCTCCCTGGGGTTTTCCAAGCCAAAGCCTGCAGCTTACTTAAAAAAAAAAAAAAAAAAAAAAAGCACTTAAGGAAAGTTACAGACAGCTACAAAAAAAAAAAAAAAAAAAAACCCCACAAACACACACACAAAATCCAAACCGTTCTCCCATCTCCCCGCCCACCTCCCCCCAACACAAGAGTTTCCTATTTCATTTCTTTTCAAAGTTTTGCCCGTCACCTCTCTGTCTGGGGAGCCAGGGTAGACTGCTGGTGGGTGGAGGCAGGCACGCAGCGGGCAGAGCCCATCTTTGGCCGGAGGGAGGCGGGAGCGGCAGTCCCCACAACCTCCTCGATCCAGACACCCGTCAGCCGGCCTCCTGGGCCCCCGCCAGGAGAGGGGAGCGAGGGCAGCTGGTCCCAACGGCAGGGCCCTCAGCACCTCTGGCCTCCCCACCTGCCGACCCCTGTACCTTCTCCAGCTGAAAAGGACAGTCTCATCTTGGGCCAGACACCACTGTCATGTGAGGGATGGACGCTGTCCGTCTCGGACGCGGAAACCTGGTCAGGGCTGCGGGGCCGTGGAGACAGCAGCTCCCTCCTGCCCACCCCGCAGAACAGCCTGTGGCGGCCCTCAGCACCCCGCAGGCTCTCACTGAAGCTGCGTCCAGCTCTGCGCATGCACCGTTTCCGGGCTTCACTCAGAGGTGAACCAAAGGCGGGAGCAAGCCTGGAGACCTGGCCCGCCACCGTGGCCAGTGCAAGCTGCCCCAACCACAGACGCCACAGCACCCGCTCCAACACTCATCTGCCGAGCAGGCAGGCCGTCTGGCTGGCTGAGGGACGCAAGGTGCAGTGCAACGAGAGAGATCAGAGAGCCTGAGAGGAGCCAGATGGTACGCACACAGCTGCTCTGGGTGGAGCCCGCTAAGCCTCTTCCACCTCAAAGAGCCAAAGCCAGTCTCCAGCCTTTAAGGACAGAGGGAAAACTGCCTTCATTCCAGGCCCTTGCTCTGGAAAAAAGGGATGGAGGGTAGCCTAGGCGCAGGGGGAACCAGTCTGTCATTACCAACCTCTGCAATGCACAGCTTGTTTTCCCCAAACGCACTCAGAATGGTTTGCTCCTAAGGTAGTGATTTCACAGGGGAAGTGTCCTGGGTACAGTTACCACGCTGACGCCATCGACAGCGATGGCGCCCCACAGACACGCGAGAGTTAGTTCTAAGTCTTGCGCGGCAGCAAAGTCCACCTACGTTCTGCCCGCACTCAGCAGGAGGCTCAGCATCCTGGAGTCAGACTGTCTCCGGGCTTCCCTTGTGCTGACAGCGAAACACTGAGCAAGTTTCGCAGCCCTTCTCCTAACGCCGGGAGCCGCGGCCTCACCCCCGCCGCCTTCCAGAAGCAGCCAGCCTGGCTGGCAGGGAGCCACCCTGAGGGGTTTTGGAAGGGGACGTCTGTTCACCGTCTCCATCTCCCAGAATACTAGAGGTGAGGGGCTGGCACCCTCCCCAGGCTCTCTGAGCCTACAGAGCTAGCCCAGTCTGCAGGCAGGGCGCAGAGGCCCTGGGCCGTAGCTGGGGGAGGGAGGTACAGGCGTGGCTGCTCCTCTGTCCTGGGGGCTGCAGAGCCCGGCCCCGGCTGGGCAGCAGTAGGAACACAGAAGCTAAGCTCACCAAAGTCCTATTGGTTAATGTTTCTAGTGAATTTCCCAGAAACACTTTTAAGTAGACTACCAAACTACCCTTTCTCAATTAAAAATTCATTAAACTGCTAAAACCTCTCCCATGCACTTTTTTTTTTTTTGCAAATCAAATATTTGTATAAACAAAAATAGGAAGGAAAGAAAAAAAAAAGGA EMBV3_33535 GTCTGCTTTAATTTATTGCGTGCCTTCCTGAGTTTACCCCGCACAGGCCGACAGCGATGT Gene GeneID:539766|FGD5:XM_002697136:88_cdna Constitutive 0 NULL GeneID:539766 22 GENE FGD5 NULL FYVE, RhoGEF and PH domain containing 5 EMBV3_06183 GCCTGGCAGTCAAACCGAATCACTCATTGTCTCCTGTGGACCCTTAGTTTCACCCAGAAT Gene GeneID:615809|LOC615809:XM_002699560:58_cdna Constitutive 0 NULL GeneID:615809 X GENE LOC615809 NULL similar to family with sequence similarity 127, member A EMBV3_06504 CTTTGCAGTAATCTGGTGAAGCCACCGGGAGCCCTACTGACACCTCAGAATCACAGTGTT Gene GeneID:618580|TMED9:NM_001034812:49_cdna Constitutive 0 NULL GeneID:618580 7 GENE TMED9 MGC127155 transmembrane emp24 protein transport domain containing 9 EMBV3_41206 TGCTCCTGGCAGAAGCCTATGGATCTGGAGGCGCCGGCAACCACAGCTACTGCCGGAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23527 GGAACATTGTGAAATGGCTGAAAAAGGAGGGTGGCAGAAGGATCTAAAAATATACGGTTG Variant GeneID:517402|PDHX:NM_001075751:45_cdna 260^360 1 EMBV3_11250 GeneID:517402 15 GENE PDHX MGC143185 pyruvate dehydrogenase complex, component X EMBV3_38708 CGACTGGGCTGCTGGACACCCAACAGGCCCCGAGAGAGGACAACTGTGCCACTTGAGATG Variant GeneID:506760|CARHSP1:NM_001045951:78_cdna 130^560 1 EMBV3_03325 GeneID:506760 25 GENE CARHSP1 MGC137010 calcium regulated heat stable protein 1, 24kDa EMBV3_35569 CCAACAGAAAGAGGAAGGAAGACCAAAGCTAATTATTGATATTTATTGATACTCTTGGTG Gene GeneID:493988|SLC14A1:NM_001008666:35_cdna Constitutive 2 NULL GeneID:493988 24 GENE SLC14A1 MGC127665 RACH1 UT-1 UT-B solute carrier family 14 (urea transporter), member 1 (Kidd blood group) EMBV3_31777 GCGTCCCAATCAGTGACCAAAAACCAATCGGCACCCACAGAACTCGGACAGAAGACCATA Gene GeneID:100337090|LOC100337090:XM_002692045:23_cdna Constitutive 0 NULL GeneID:100337090 13 GENE LOC100337090 NULL ankyrin repeat domain 26-like EMBV3_31700 GCATTGCCCTGCTCATCCTCCTGATTGTGTTGCTGGTCATCTTTCTCCCACAAAGCAGCA Gene GeneID:540406|VAMP5:NM_001046476:131_cdna Constitutive 0 NULL GeneID:540406 11 GENE VAMP5 MGC137745 vesicle-associated membrane protein 5 (myobrevin) EMBV3_01319 ATGTCATGCCGTGGTAAACAGGGTGGCAAGGCTCGCGCTAAAGCCAAGACTCGCTCTTCA Gene GeneID:524236|LOC524236:XM_002685218:99_cdna Constitutive 0 NULL GeneID:524236 2 GENE LOC524236 NULL similar to histone, H2A EMBV3_33277 CAGTAAGTTTGCACTGCCCTACATCCGTGATGTGCCCTGTATGCATCTGAGGAGGAGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09775 ACACGAAACTTCCAGGACTTTGACTGTCAGGAAGAGTTGCAGGCCAACCTGGACCTGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39284 GAGCAGTTCATCTTCAGCCAGTTGACCAGGACACACGACGTTTTGAAGAAGGCAAGGACT Gene BVT0102_186507 - 0 NULL GK000003.2:22900004-22967139 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172573 TCONS_00172574 TCONS_00172581 TCONS_00172585 TCONS_00172584 TCONS_00172583 TCONS_00172576 TCONS_00172582 TCONS_00172586 TCONS_00172572 TCONS_00172575 1 XLOC_104168 Coding TCONS_00172581 XLOC_104168 Coding Coding - 3:22916555-22956902 - TSS128509 4967 1 TCONS_00172581_7 1349 23 0.877459971248699 0.000293404034929446 0.000292507156765851 0.000429717719521088 0.000659010702668003 0.000525392266757545 0.000357265658371507 0.00024476686528323 0.000332680922388075 0.000100674582964923 1.51679590433944e-05 8.7252113610314e-06 8.38817123465815e-73 2.35877893594537e-05 0.000172455539334754 6.75304602713464e-05 9.04306827834619e-78 0 0 3.94890879385804e-19 2.28961028376339e-14 0.000196937774414509 0 0 2.36122306081197e-05 9.80576866509154e-07 0.000320514783245858 0.000156682070648891 2.13032433311669e-35 1.56216368817796e-05 1.71029669240552e-61 XM_005197746.1 PDE4DIP PREDICTED: Bos taurus phosphodiesterase 4D interacting protein (PDE4DIP), transcript variant X4, mRNA. 0.0 4850 97.97 0.554459432252869 XR_246994.1 PDE4DIP PREDICTED: Homo sapiens phosphodiesterase 4D interacting protein (PDE4DIP), transcript variant X8, misc_RNA. 0.0 4843 87.22 0.794040668411516 TCONS_00172581_7 sp|Q5VU43|MYOME_HUMAN MYOME_HUMAN Myomegalin; 0.0 2054 79.84 0.945885841363973 1 coding 0 0 0 0 0.0536227217583169 0.718785598093858 -0.0764644212445231 0.144360668878744 ATCGAGGAGGAGGCTGCACACAACAGCCACCAGCAACTCATCAAGGTGGCGTTGGAGAAAAGCCGGGCAGCTGTGGAGACCCAGAATGTGTCTCCTGCTCCTCCCACCCTGACAGGAGGGGACGGTAACAGGGGTCTTCAGGAGGAAATGCTCCACCTGAGGGCTGAAATTCACCGGCACTTAGAGGAGAAGAGGAAAGCTGAGGGGGAACTGAAGGAGCTAAAGGCTCAAATTGAGGAAGCAGGATTCTCCTCTGTGGCCCACATCAGGAACACCATGCTGAGCCTTTGCCTTGAGAATGCAGAGCTGAAAGAGCAGATGGGAGAAGCAATGTCTGATGGATGGGAGATTGAGGAAGACAAGGAGAAGGGCGAGGCGATGGTGGAGACTGTGGTTGCCAAAGGGGTTCTGAATGAGAATAGCCTTCAGGCTGAATTCAGAAAGGTCCAGGGAAAACTGAAGAATGCCCGCAATATCATCAGCCTCCTCAAAGAACAGCTGGTGTTGAGCAGCAAGGAAGGGACTAGTAAGCTTAATCCTGAGCTCCTTGTGCACCTGGCCAAGGAGATCAACAGAATGAACACAGAGCTGGTTTACTCTCCTGGAAAGCACCAATGCCTAGAAGAGGAGGGTGTGACCACAAGGCCGTGCCCCAGACCCCAGAGCCTTGACCTTGGGGCTGCCCTCACAGTGGATGCTCACCAACTGGATAACCAGCCCCAGACCCATGACCCTGGGCCGCAGTCAGAATTTAGCTTCTCAGGATCCACGAAGCACCTGCGCTCCCAGTTGGCACAATGCAAACAACGCTATCAGGATCTCCAGGAGAAGCTGCTGATATCAGAAGCCACTGTCTTTGCCCAGGCCAACCAGCTGGAGAAATACAGAGTCATGTTTACAGGTGGATCGTCGGTGAAGCAGGACAGCAAGCAGGTGCAGGTGGACCTCCAGGACCTGGGCTATGAGACCTGTGGCCGAAGCGAGAACGAGGCTGAGCGGGAGGAGAGCACCAGCCCTGAGTGTGAGGAGCACGACAGCCTCAGGGAAACAGTCTTGATGGAGGGGCTGTGCTCCAAGCAGGGACACCTGGACTCCACAATGACCAGCCCCCCTGGGAAGAAGCCCCTGGAGAGCCAACCAGGGAAGCAGGAGGAGCTCCGGGCGTATGGAAAGTCAGAAGACATCTCTGTCCTACGTAAGGACATCAAAGATCTGAAGGCCCAGCTGCAGAACGCCAACAAGGTCATTCAGAACCTGAAGAGCCGGGTTCGGTCCCTCTCAGTTACAAGCGATTATTCATCTAGTCTGGAGAGACCCCGAAAGCTGAAGGCCGTTGGTGCCCTAGAAGGAACTTCACCGCACAGTGTCACTGATGAGGACGAGGGGTGGCTGTCTGATGGCACTGGGGCTTTCTACCCTCCAGGGCTTCAGGCTAAAAAGGATCTGGAGAGTCTGATCCAGAGGGTGTCCCAGCTAGAAGCCCAGCTCCCAAAAACTGGAACGGAAGGGAAGCTGGCCGAGGAGCTGAGATCTGCTTCGTGGCCTGGGAAATATGATTCCCTGATTCAGGACCAGGCCCGAGAACTGTCCTACCTACGTCAGAAAATACGGGAAGGGAGAGGTATCTGTTATCTTCTCACCCAGCACTCGAAAGACACAGTAAAGTCTTTCGAGGACCTCCTAAGGAGCAATGACATTGACTACTACCTGGGACAGAGCTTCCGGGAGCACCTCGCCCAGGGCAGCCAGCTGACAGAAAGGCTCACCAGCAAACTCAGCACCAAGGATCATAAAAGTGAGAAAGATCAAGCTGGACTCGAGCCACTGGCTCTGAGGCTTAGCAGGGAGCTGCAGGAGAAGGAGAAAGTGATCGAAGTCCTGCAGGCCAAGCTGGACGCCCGCTCCCTCACACCGTGCAGCAGCCATGCCTTGTCAGACTCTCAGCGCTCTCCCAGCAGCTCCTCCTTCTTGTCTGACGAGCTGGAAGCCTGCTCTGACATGGACATCGCCAGCGAGTACACACACTATGAAGAGAAGAAGGCTTCACCTGGTCACTCAGATTCCATCCATCATTCGAGTCATTCTGCTGTACTGTCTTCCAAACCATCAGCAACCAGTTCATCTCAGGAGGTTAAGGCCGAACCCAGCAGCAACCCCGTCAGCTTCCCAGCTCCCCAGAATCCCCCCAAGGAGGCCAGCCAGGCCCATCCAGGTGTCACCAGTGTTCATCCTGCTTCCCCAGCCACACTGCCAACCAACCACACAGAAGCCAGATCTTCCCACTACCTCAACCCTCCCCAGCCCCTCTGTCCTCCAAGGGGCACCACGGACCTGGGCAGAATCCTGGAGCCTGGGTACCTGGGTAGCAGTGGCCAGTGGGACGTGATGAGGCCTCAGAAAGGGAGCATATCCGGGGACCTATCCTCAGGCTCCTCCATGTACCAGCTTAACTCCAAGCCCACAGGGGCTGACCTGCTAGAGGAGCATCTTGGTGAAATCCGGAACCTACGCCAGCGCCTGGAGGAGTCCATCTGCATTAATGACCGCCTGCGGGAGCAGCTGGAAAACAGGCTCAGCTCCACTGCCCGCGAAAGTGGCTCAACCTCTAACTTCTACAGTCCAGGCCTGGAGTCCACACCTCAGCTCTCCAATGAGAACAGAGTCCTTAGGGAAGAAAACCACAGGCTTCAGGCTCAGCTCAGTCATGTTTCCAGAGAGCACTCCCAGGAAACAGAATGCCTGAGGGAGGCTCTGCTGACCTCTCGATCCCGGCTTCAAGAGCTGGAAATGGAGCTGGAGCACCAAAAGGTAGACCGGCAGCAGTTACTGGAAGACCTGAAGGAGAAGCAGCAGGAGATCTTGCATTTCCAGGAGGAACGACTGTCTCTCCAGGAGAAAGACTCCAGGCTGCAGCGTAAGCTGGCCCTCCTGCAGCAACAGTGCGAAGAGAAACAGCAGCTCTTCCAGTCCCTCCAGTCAGAGCTACAGATCTATGAGGCACTTTATGGTGACTCCAAGAAGACGCTGAAAGCTTATACCTGGGATGCCTGTCACCAAGTCCCTTTGAGCAGTGACTTGAGCCACCTGGTGGCAGAGATCCGAGCTTTGCGAGGGCAGCTGGAGCAGAGCATTCAGGTGAACAACTGTCTGCGATTGCAGCTCGAACAGCAGTTGGATGGTGGTGCCAGCAAAGCTGGCCTCAGCTCCTCCTCCGTTAACCAGAAATTCCCCACCAACACTGACCCTGGAAACAAGCAGCCATTCTTCCAAGATTCGGTTGCCTCCCCTCCAGTTCGGGATGTGGGCATGAATTCTCCAGTTCTCGTCTTCCCCAGCTCTTCTTCTGCGGCTCCTGGCCCAGAGACCACAACCTTCAGTAGGACGAACGAGCTGGGTTTGGATGCTTCTCCAGTAATGAAGAACCCTCGCAAGCTGGAGGGCGACGCTACTGATGGCTCCTTTGCCAATAAGCATGGCCGCCACGTCATTGGCCACATTGATGACTATAGTGCCCTAAGAGAGCAGATTGGGGAGGGCAGACTGCTGGTCAAGAAGATAGCATCACTGGTGAGACCAACCTGCAGCTTCTCTGGTCTTGAAGCTCCAGGCATAGAGGTGATGGGCAGCGAAGGCATCCAGGAGCTGAGGAGCAGCGCCACCGCCCTGCACCACCGGCTGGAGGAGTCGGCCTCCCTCCTCACCATGTTCTGGCGAGCAGCCTTGCCAAGCTCCCCCGGCCCTGTGCTTGTGGACAAAGTGGGAGAGTCTATGAAAAAGGAGCTTCTGGAACTGAGAACCAAACTATCCAAACAGGAAAGTCTCCTTCAGAGTACATCTGAGCGTCTGAAGACCGCCAACCAGCAGAAGGAGAGCATGGAGCAGTTCATCTTCAGCCAGTTGACCAGGACACACGACGTTTTGAAGAAGGCAAGGACTAATTTGGAGAAGACCTCTTACAAGACTGCTTCTGTAAAGCCTTATTCCTGTCCCAGCAAAGGAGACATGCAAGAAGCGAAGCCACCAGAGGTCCTTAAAACAGCAGGAAGGATGGGCCTGTGCCCCTTCTTCACAGCTCCCTGTCTGCTGAGGAGGATCTGGGCCCTCCTCCACACCTACTGGAGGGTCTGGAAGGAGTCAGAGAGATTGCCTCGTGGGCAGGGTGAAAGGCAGAGGGTCTTTCCTGCAGTTGAGGAATAACAAGGCAGGGTGCCCACGGCTCAGCACTAAGGAAAACATGCCTAGTTCATAGAGGACTTTGTGACACTGCTTCTGAATACGCTGGGGGCATGGGAGCCAGCAACAGACATTTCTTGCCTCATCACCTGTCCTCAGAGGGTCAGCTCAGGGGAAACGACCTGCTTCTCCACAATGCAGCATGTGGTCCCCACATTGGCACTCCTCGGCAGATCTGAAAGCACAGGACTGAGCAGCGGTGCCCTGCAGGACAGTGTGGGCAGGGGGGCCCGACTGCCTGACCCAGGGCCCATGCAGCTGGGTCACTGTCAGGCTGGGCATCAGTCGACACTGCAGCACCTGACTACTTTGAATCCATGTGGTGGGAGTGGTGACTCCCATATGCCATCTCATGCATAGCCTAGACTTCCTACTTATATTCTATTGTGATCTCCAAAAGCTGTACTGACTTTACATATACTGTCCCCTTTTGTCATCCCAACTTATCTCTGGGAACGAGGGACTAATGGCCACAGCAAGCCCACTGAAAGTCTTGTGTAAAGCAAAGCAGTGATCATTTTTAAGTGACATGCAAGAGGCCCCCAGTTGTGCTTGTGCTGAAGCCTAGTCTGTGTCTTCACAAAAGTGCTTTAGAAAGTGTGTATGTGTGTATAAATGTATGATATATATTTATATATGTTGCTATAGTGATATGTGGAAAGCTAACATAACTGGTGGACAGGGTCAGTGAAAGGAAATGACACAGTCTTTTTGGTGGCTATTAAAGCAGACTA TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172590 s 5' 0 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172586 TCONS_00172590 s 5' 0 EMBV3_22769 GAGCAGTTGCATTCTTTGAAAATTCTTGCATTTTACCAGGCACTTTGCCTGTGAAGCAGG Gene GeneID:100299906|LOC100299906:XM_002688119:26_cdna Constitutive 0 NULL GeneID:100299906 6 GENE LOC100299906 NULL similar to phosphoinositide-3-kinase adaptor protein 1 EMBV3_21147 CAGGCAGATGGGGACCGCTGAGTCCATTAGCACAGGTCTGGCTTGAGTCTTAGTTTATCT Gene GeneID:541205|THNSL2:XM_002691356:192_cdna UTR3_Alt 2 NULL GeneID:541205 11 GENE THNSL2 NULL threonine synthase-like 2 (S. cerevisiae) EMBV3_11714 GTTTGGTCAGCTTGGCTGGATCCCTGTATGCTATTGGTGGTTTTGCCATGATTCAGCTGG Gene GeneID:505794|KBTBD10:NM_001083377:208_cdna Constitutive 0 NULL GeneID:505794 2 GENE KBTBD10 MGC143407 kelch repeat and BTB (POZ) domain containing 10 EMBV3_07997 CCTCAGAGATGTTCTTTCTTGTTTGGGCCCTTCCCGTCATTTCTATTTTGTCCTGGGGGG Gene GeneID:508156|SSBP4:NM_001035273:32_cdna Constitutive 0 NULL GeneID:508156 7 GENE SSBP4 MGC128808 single stranded DNA binding protein 4 EMBV3_33758 GGGCATTGTACTCTCACCGCTTGTATTTATCCTGGTCTCCTATGGTTACATCGTGAGGGC Gene GeneID:524290|LOC524290:XM_002689082:5_cdna Constitutive 0 NULL GeneID:524290 7 GENE LOC524290 NULL similar to olfactory receptor 216 EMBV3_32214 CACATCACTGTGGTCAGTCTGTTCTTTGGGCCGTGTATCTTCATCTATGCCTGGCCTTTC Gene GeneID:787134|LOC787134:XM_002690689:301_cdna Constitutive 0 NULL GeneID:787134 10 GENE LOC787134 NULL similar to Olfactory receptor 4L1 (Olfactory receptor OR14-28) EMBV3_02776 CTTGTAACGGCAGAACAATGAAGTTAACTGTCCATCAGCAAAGGGATTGGTAAGATAAAG Gene GeneID:615200|N6AMT1:NM_001083513:14_cdna Constitutive 0 NULL GeneID:615200 1 GENE N6AMT1 MGC143380 N-6 adenine-specific DNA methyltransferase 1 (putative) EMBV3_13520 TTGGCAAAGTGCCTCTGGATCCACGCATAGGAATCCAGGAGTTCTGTAGTCAGCGTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03411 CCCGCCCTCCAAGTCCAACCTCCGATCTACTCTGGCGCTGAAATGGATTAATAAGGAACT Gene GeneID:100337459|LOC100337459:XM_002692218:1440_cdna Constitutive 0 NULL GeneID:100337459 13 GENE LOC100337459 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_11125 CCCGACGCACCCGCAGTGCGGATACTGAAATGTGAAAATGTCTTAGGACAAATGAAACAC Gene GeneID:100298485|LOC100298485:XM_002687774:115_cdna Constitutive 0 NULL GeneID:100298485 5 GENE LOC100298485 NULL hypothetical protein LOC100298485 EMBV3_00400 AGGAGTTGTATGCCTGGGACAACAAGAGAGAAACCTTTAGAAAATCTTCACTCAGCAACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32657 AGCAGAAACCATCAAGGAACAACACTGACAACCACCTGTTGAGGCCCTGAGTCAAGACAA Variant GeneID:789618|CDC42SE2:NM_001102537:78_cdna 168^243 3 EMBV3_12075 GeneID:789618 7 GENE CDC42SE2 MGC166112 CDC42 small effector 2 EMBV3_30964 GTCAAAGCTTCGGCTCCACTCACAACTCCTATGGAAACTCATAAACAGGTATGGAAATTC Gene BVT0102_101698 + 1 EMBV3_28925 GK000013.2:74088252-74092648 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043874 1 XLOC_026058 Coding TCONS_00043874 XLOC_026058 Coding Coding STK4 13:74088359-74183088 j TSS32361 7277 1 TCONS_00043874_5 411 0.248316613989281 12 0.923306730850435 7.02720899312442e-05 6.82107186276619e-06 1.34026584750722e-16 9.85583342034491e-05 2.01710229634344e-05 0.000211049767630891 7.73644055110453e-05 7.51499650715205e-06 4.21667517381821e-26 1.42627231293823e-31 7.41814736844921e-166 2.14248038247451e-05 9.37191862408083e-62 1.16959374994262e-25 2.73150942790367e-72 3.04335585104204e-68 4.05410794772407e-61 5.55672086676519e-66 8.60093423359579e-05 1.09998784769717e-05 1.21987690984721e-51 3.83341545202072e-93 3.76202853229739e-55 8.99224037540754e-72 1.51031066753112e-40 1.16114703240689e-63 0.000117371188652162 8.02735391333005e-94 8.89431565187653e-67 1.97148315523555e-92 NM_001015602.1 STK4 Bos taurus serine/threonine kinase 4 (STK4), mRNA. 0.0 3315 99.78 0.253813384636526 XM_005260530.1 STK4 PREDICTED: Homo sapiens serine/threonine kinase 4 (STK4), 0.0 2890 81.76 0.404012642572489 TCONS_00043874_5 sp|Q5E9L6|STK4_BOVIN STK4_BOVIN Serine/threonine-protein kinase 4; 0.0 862 100.00 0.997566909975669 3 coding 0 0 0 0 0.10429246408398 0.896206544419388 0.0125661300870878 0.793897244529025 GCAGCAGCGCTGGGCATCTTGGCGTGGTATCGAGAACCCTGCAGGATATGACACCTGGAGTTGTGGCAGCCATTTTGCATCTGAGTCAATAAGCACAAGGACGAAAAGCCAACATGCTGAATTGGGCCGGGGGGAATGATGAAATCGACCTTGTTGTGTCAATCAACCCTACAACCGACTCCTGGACTTCTTAGTAAAAAACAAGAAATGTGATATGGTTGGGCCACTCAAATGGCTGTTCTCTTGTTCTCTGTACATCCCCTGGCCAAACAGAGCCTGCTTCACCTAACACCCTACTTACATGACTGACCTTCCTATGTACCTGTCCCAAGCCCCAGCTAATGACAGCTTACCAAAGGGGTGGTGAGTGGCTAGCACCTTTGCTGGTTTCCTTGGTAACTAATGAGCCCACCTGAGATCAATTCCTCTATAACTGATAATTCCCCGTTTCCCATTTGGGGAGCAAAGACTGCCACTGTGTCCTGGCTGCCATGCACTGCACATGGGGTTTTGTAGATGGCATACCAGAGGCTGCTTTGAGTAACTTTCTCTACAAGCAAACTGGGATTTTTCCATTTTCTTAATACTCATTGATGGTGGTAGCAACTGAGGATTTATGAATTTCCATACCTGTTTATGAGTTTCCATAGGAGTTGTGAGTGGAGCCGAAGCTTTGACTCTCATGCCCAAGGAGAGGGTCCAAGTGGTTGTCCAGTTTGGTAGTGCAGGCTCTGGAATTCTATCCTGGAAAAGGAAATGGCAACCCACTCCAGTATTCGTGCTTAGAAAATCCCATGGACAGAGGAGCGTGGTGGACTATCCATCTGGATTTAAATCCCCAAACCGATACTTTTAGCTATGTGAGCTCACCTCTCCGGCCTTATGAGCGTAATATTACCTGCCATAAAGTTTTAAAACTACTAAGTGAGTTAGTGGTAGTAGTAGTAATTTAGTTGCTAAGTTGTGTCCGACTCTTGTGACCCCATAGACAGTAGCCTGCCAGGCTCCTCTGTCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTTCCATTTTCAGTTAGTAGTAGAGTATCGAGAACATGATAAGCAGTGGAAAATAATAGATAAGACTGGGATAGTTACAGCCTTGATATAAGGATTAAATAATATAAAATGGCAAGTACATGGTAAAAGCTTAATGTGTGCTAAATCGCTTCAGTCGTGTCCAGCTCTTTGTGACCCTATGGATTGTAGCTTGCCGGGCTCCCATGGTCATGGGATTCTCCAAGCAGGACTACTGGAGTGGGTTGCCATTCGCTCCTTCAGAGGATCTTCACCCAGAGATGTAACCCGAGTCTCTCATGTCTCCTGCACTGGCAGGCAGGGTTTTTTTTACCACTAGCGCCACCTGGGAAGCTCCAAGAGCTTAATAAATCTTGGCTATTTTTATGTTCACAAGCTGACTCAAAGGCAGCTGAAAAAGTTGGATGAAGATAGTTTAACTAAACAACCGGAAGAAGTGTTTGATGTCTTAGAGAAACTTGGAGAAGGGTCCTATGGCAGCGTGTACAAAGCTATTCATAAAGAGACCGGTCAGATTGTTGCTATTAAGCAAGTTCCTGTGGAATCAGACCTGCAGGAGATAATCAAAGAAATCTCTATCATGCAGCAATGTGACAGCCCTCATGTAGTCAAATATTACGGCAGTTACTTTAAGAACACAGACTTGTGGATCGTGATGGAGTACTGTGGGGCTGGTTCTGTATCTGATATTATTCGATTACGAAATAAAACGTTAACAGAAGATGAAATAGCTACAATATTACAGTCAACACTTAAGGGACTGGAATATCTTCATTTTATGAGAAAAATACACCGAGATATCAAAGCAGGAAATATTTTGCTTAATACAGAAGGTCATGCAAAACTTGCAGATTTTGGGGTAGCAGGTCAACTTACAGATACCATGGCCAAGCGAAATACAGTGATAGGAACACCTTTTTGGATGGCTCCAGAAGTGATCCAGGAAATTGGGTACAACTGTGTAGCAGACATCTGGTCATTGGGAATAACAGCCATAGAAATGGCTGAAGGAAAGCCTCCATATGCTGATATCCATCCAATGAGGGCCATCTTCATGATTCCTACCAACCCACCCCCCACATTCCGAAAGCCGGAACTGTGGTCAGATAGCTTCATGGATTTTGTGAAGCAGTGTCTTGTCAAGAGCCCCGAGCAGAGAGCCACAGCCACTCAACTCCTCCAGCACCCGTTTGTCAAGAGTGCCAAAGGAGTGTCCATACTGCGGGACTTGATTAATGAAGCCATGGACGTGAAGCTGAAACGCCAGGAGGCCCAGCAGCGGGAGGTGGACCAGGAGGAGGAAGAAAACTCTGAGGAGGATGAGCTAGATTCTGGCACGATGGTCCGAGCAGCAGGGGATGAGATGGGCACTGTCCGAGTAGCCAGCAGCATGAGTGACGGGGCCAATACGATGATTGAGCACGATGACACGTTGCCGTCCCAGCTGGGCACCATGGTGATCAACACGGAGGACGAGGAAGAAGAAGGCACGATGAAAAGAAGGGACGAGACCATGCAGCCTGCCAGACCATCGTTCCTTGAATATTTCGAACAAAAAGAAAAGGAAAATCAGATCAACAGCTTCGGCAAGAGTGTCCCTGGCCCATTGCAGAACTCCTCAGATTGGAAAGTTCCCCAGGATGGAGACTATGAATTCCTGAAGAGTTGGACGGTGGAAGACCTTCAGAAGAGGCTCCTGGCCCTGGACCCCATGATGGAGCAGGAGATTGAGGAGATCCGGCAGAAGTACCAGTCGAAGCGGCAGCCCATCCTGGACGCCATTGAGGCCAAGAAGCGGCGGCAGCAGAACTTCTGAGGGCAGCCTGGCCCCAGGCCGCCAGTGAACTCTGGCTCACTCGCCCCTCCAGCTCGCCTCCCTCCTTTCTCCAGAGCCCCCTCTGTGAACTCAGGAACCAAGAAAGTGCGCCACTGGCCAGGGCTGCGGAGCCAGTCGGCACGCTGCCCCGCTGTGTGTATTTGAAGTTGGACAGGTATATATATATCATTTCCCAGGACTCATGTGGGCGCTTTGAACCTCAGACTTTCCCACCCCAGAACCAGAGACTCCTCGTCGAGTGAGAGCTGGGAAAGTGTCACGTGGTCTCTTTGTTTTTCTTCTCCCAGTAGCTTTCAGTGGTTCTTTCTGGAAGACTTTTTTTAAAAAAATATATAAATATGCACATATATATATAAATTATAACTAGATTCCCCACGTGGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAAACAGTTGCCTCTTTTCTGTAAGATAACGGTACTGTGGAACACGAGGGAGGAGGACACCAGGAGGCTGCGGGGGCCCTCCAGCCCCTGGAGCCGGCCTCACCCTCCGGCTGGGCTGTGCTGAACAGATGAGGTCGGGGTCAGCTCCTTCACCATGCTTTCAGCCTTACGCGGGCCACCCCTGGCTTCCAGAGCTATTAGTGATGTCCTGGGAAAGACAATTTGCATTGCCTTTCAGAGTCTCAGGAGAAGCCTGGCGCCCTCCTTGCGAGCTTGGCCTTTGCAGTTTCAACACCCTTCATCCACCTCCACTCTCCCAACTGCCTAGAGTCACAGCACAGACACTGCCCAGTGCCTTAAGAGGAGACGTGATCAAGCGAGGGCACAGGCCTACCCGGAACTCCCAGCAAAGTGGGGCTGCATTCAGTCCACAAAAGGGGAAAAGGCTTTCCAAGTTCTCGTCATTCATGTGAAGAGGACACCCGTGGCATTTTGCTCCATGTTCCTTGCAGACAGGGGTAGGGGGCGTTGCTTTTGTGACCCACATTCAAATATGTGACTGTTTTCTTTTCTCATTTTACTGCTTGGGGTCTGGAAAGGGTAAATGAATATCAGACTAAGATTTGTCCTCCAGGAGACTCAACCCAGATGTGTAGGATGCCAAAACTGGAAGGGACCATATAGATACCACCTGGCCTGATGGCGGCCCAGAGCAGGGAAGTGACATGGCCCAAATCACGAAGCAAATGAAGCGCTGGGACTGGATGGTGGGGCCCCTCACTCCTGCTTCACTGGGCTAAGCAGCCCCTTCTCTGAAGGAAGACGCTCGTGTCCGTTTTGGTGAAGTTCCAAGGAACCCTGCTCACGGGAACTTGCCTGGCTTCGTCTCTTCAGTAGGCGGCTGGCTGTGAAGAGATTCCCACGGGGAGCCAAGGTCATTCTGTTGCAGCCATCCCACAAGCTCTCCTGCATCTGCCGGATAGCACATGAGCATCACACAGGTAGACGCAGAGCCGAAAGCAGGTCAGAGGGTTTTGCAACAGACAGCGCTGAGCCATCCCTCTGCAGCTTTGGCTCTAGGCCACGTGTCACTTAGTCACATGGCCGAGAGCAGACAGTTGCGAAAGGCGACTGCCTTTTTATTTTTTAGAACCTCTTCCCCTCAGATAGGGGAGCCGTGACTGGGTTGCACCTAAGGATACTGTAATTTGACTCCATAGTTGCTCTTGCTGCCCAAAGCTGGGAATCAGTGGAGAGCCAGGGATGTTCCTCTTCTGTGGCCAGATTCTGTTCTTTGCAATGACAGCAAGTTATTGAAAAGGCAAGAGGCCATTGCTGGTCTGCAGGGCTTGGCCAGTTATGCAGCTACTTGGCAGATACAGAGAACAGAGGACAATTTGAGGATCCTGCTATAATAATAAAGGGCAGCTAGCAATCATGACCACTTACTATATGCCAGGCACTGAGCTAGGTAGGTAGGCTCTTTATGTCAGCTCCAACCTCCCCAATAACTCTGTGAATTAAGTATTTTATCTCCATTTCATAGAGGATGAAGCAAGTTCAGAGAGAAAAAAAGTTCTTTCCATAGGTGGTACAGCTAGTAAGTGATAGAATCAGGATTCATAGCATCACCATGTAGGACCAGTATTTACAAGGAAGAGGAAAACCACAAGTCTTTTTAAAAATTTCATTTTATTCACATATAGTTGATTTACAGTGTTTTGTTAGTTCTGCTGTATAGTAAAGTGACTCCGTTATACATCCTTTTTCATACTCTTTCCCACTGTATTTTATTGCAGGATATTGAATATAGTTCCCTGTGCTATACAGTGAGACCTTGTTGTTTATCCAACAAGCCTTCTTAAAAAAAAGGAAGTGACCACTTTTCTTGCACAGACTAAAAAACCCAGGCTGGCATTTTTAGGTTGGGAAACCACTGAATCGGTCAAGTCTGACAGTCAAGTGAGTTAAAAAACAAAGTATGGAGCATGAATTTCCCTATACCATCTGCTGTGCTAATTAACAGTCCTGCCTCAGTTTCCCTCTCTCCCTCCCTCCCTCTCTCTCTCTCTGTTTTTTAAAGGATTTTGCACTTGGCCAGACAGGAGAGGAATGCCCATTTTCTCCCTTCCTAAGCTAGATCCAAGTAAAAGAAGGTTCAGTTTTTCCCCATAAATATTCTTGGGTGATGAGTCTTGATCTGAAGTTTATTTTGTTTCAGTTCCTTGTGTGCATCCACCATGCTGGTCCAAAAAGTGCATTGCTCTCCAGTTGAGCTAGACGGAGCCCTTTGGCCAGAAGTCAATGTATTTTGGATGAGATAGATTTTCTGACAAGGTGTGTTTGTTTTCTTATGCCAGAAGGCAGAGAAGTCAATCCTAGTCATTTTTCTCCTTGGATACTAAATTCACATAGGTCAGCTGGCTTCCTGTAGAGCCCTGAGCTTCATCATTTGTGACTCCAGCTTCCACGGGACTCTGAGCCTCTCACTTGTTCTCCCCTAATAAACAATGACCCAGACCTAACTGTGTCTTTTAAAAATCTCAGATCCTCCAGGAACATCTTTATTGCTTCCTCATCAGTAATTTTGCAGCAAATTTCTATTTTTGTTTTTCCTTGTCTGTTCTCCCAGCCACCAGTTGATAGACAGATGAACTGGTGGATAAATGTTTGGTGTGATGGATAGATAGATACAGACGACAGACAGAACCAGTACTCTGAAGCAACTTAAGAACTATGGCCTTGATTTCTTGAAGCTGTAGGTTCTGATCCAGGAAACATTTATTTAGCACCTGCTGCCAGAAATTTATTATACCATTTCAAACTCAATAGCACTTACTGGTATCAGGAATGAGAGAGGTGACACCAGTCTAGACCCTACAGATATTAAAAGGCTAATAACAATTTTATGAACAACTTAAATAGACAAATTCCTTGAAAGATACAAAGTACCAAATCTCACTCAAGGAGAAGGAGATAATCTGAACAGCCCAACATCTACTAAAACTTAATATCTCTGAGAGATACAGGTATCTTTGTCCTCATTTTACAGAAAAGGAAACCAAGGCTCCAAGAGGCAAAGTCTGTTGCTCAAGGTCAGGTAACTAGCATACAGCAGAGCCAGAGTTCATATCCAGGTCTTTTCTTCCAGTGCCCTTTCTAGCATACCATGTTGCCTCTAAAGACTGCAGCTCCTTTTTTTTACCTGAAAATTGTTCCTGCCCAGTGCACATCCTATCTGCCATCTTTCTTAAGCACTGTGTCTGTGTTTTCATCAGGATTATAGTCATTGTATTTGGAATTGATGTACTTTTTTGTGTTTGGGGTGGGGGGCGGGGCGGGAAGAAAATCTCTTCCACCAGCTTGCACTCGGACCAACTTGGAAAAAAAAAGCTTAAATGCTGTTGCAGACGTACAACTTAAAAATGTGAAGTTTGTAGCTTTAACTTTTTGTAACAAAAACTAATAACACTGGCTTAAGTGCTGACTTGAAATGCTATTTTATAAAGTTTGGATGTAAATAATCAATTGAGGTCAGCAGTTTGTATATGTATGAGACATAGCTTCCTCCATTGCCCTTTTTTTTTTTTAAATTGAGATGCTTCCTATGTGCTTTTATGTTAGAATTGTTCTCCCTCCTTCCTCCTTCCTCCACTTTGTCACCTTTGTTTTAAATAAACTGTCCTTTGGATCAGAGACTGTTCTCTTTTTAAAAACAACATCCTCCATCTATAACCTGGATGATGGTATTGTGAACCATTGACTCTGTGCTGTGTTTATTCCAGAATCCAAAGCCAGGGGAGAGGCAGGTGGCGTAGGGATTAAATTTTTGTTGGGACACCTGCTACGTGCCAGGTACTGAGCTAATTGTCAGGGGTTTAAAGATGGAACCAGACACAGCTCTGGCAGGCCACTCAGGGAGTCAGTCCAGCCCACAAGCACACAACATTGAAAATATTATGG EMBV3_30086 CCTCTTGCCCTCCTAGCATCATGACCACAAGAGAACGACTCGGGCCCTTTGGACACAGTG Variant GeneID:532606|TASP1:NM_001034577:14_cdna 638^744 3 EMBV3_08379 GeneID:532606 13 GENE TASP1 C20orf13 MGC139584 taspase, threonine aspartase, 1 EMBV3_07760 GGAACACCAGCTAATCCTGGAGAGAACCTCAAGTTCTGTTTATCAAACAAGGAACCCTCC Gene GeneID:513113|ARL11:XM_002691790:410_cdna Constitutive 0 NULL GeneID:513113 12 GENE ARL11 NULL ADP-ribosylation factor-like 11 EMBV3_00524 ATGCGTTAGCATGACAAACACCTTACCCGTATACTCTGGCCCCAGGTTAATGACACGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26453 TCTCCTGCAGAGGTGTGGTGCAATCGCTGAACAAATCCCGTTTCTCTTGCTGTTCTGTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41049 TACTCTGTGAGCTAAATCTAACACAGGGGCACCAAATTTCTTCTCTAGGGTTTCCAATGG Gene BVV0102_318081 + 1 EMBV3_41011 GK000003.2:66931505-66969544 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170163 TCONS_00170164 1 XLOC_103532 Coding TCONS_00170164 XLOC_103532 NonCoding Coding - 3:66964752-66968725 - TSS127223 3973 5 TCONS_00170164_8 74 0.124087591240876 1 0 1.36981619738964e-05 0 0 0 0 0 6.43814831170748e-06 1.73747971364971e-06 0.000184414833340606 0.000146709094196919 6.64445190481834e-05 0.000188210705652308 5.90812733879351e-05 0.000160335211656174 3.11542801894778e-05 0.00185134155565851 0.00119026660656248 0.00121009289860216 0 0 0 0.000414926034228142 0.000646333245109542 0.000460628840721215 1.74388988180922e-06 0 0 0.000116848095244132 8.18016918612031e-05 0.000210919304012586 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 4e-57 228 88.52 0.0458092121822301 0 noncoding 0 0 0 0 -0.0584537942998188 0.715103650410876 -0.0514886572839718 0.323647981758818 NNAGTCAACAGGGGGATACCATTAACACCAATTATTCGATTTGTTTACCTAATTTTTATTTACTGTTTTTGAACTTGTTTAAAATCGTGACTGAAACGTTAATATAATGACAGCAACACTGTTAGAGGGGTTTTTAGAGAAGACTCAACCGAAATTAATTTATTCAAGCAGCATATTGAATCAGTTTGTTCCATACACTATACTTCGATACTGGAGACTTTTTAAAATGTGTTAATTGGATTTTTTGCTTTCTAGGAAGCCATGATATAGTCAAAGAACCAAATGCAAAAGAGTAGTAGTATCTGATAAATGCTTTCAAAGCGTAGACAAGATTTAGGCACTGTTAATTCGTCCATTTGTTCTGTAAACATTTATAGAGTTCTGCTGTGAATCAGGTACTGTACACATCACAAGGGAGTGGGGTACCCTACTGCCAAAGGACTGATATTTTAAGCAAGGCATTAAAGAATGAGAGTTTGACCAGTGGATAAAGAAGCAGCATGCACTAAGGTATGGGGGTTTGGGGGAAGATGAGAACCTGAGTGAAGTCATTGGAGATAGGGTTGGGTGGGGAAGGAGGGTGGAAAATGAGGTGAGAAAAAGTGAAGGTGGATACCAAGTTAGAATGCTTTTTTAATATAGAAATTGTCCTCAAACTATGAATTTCTTGTCCTTCAATAGAGTTTACAAGTGTCTTTGCTGTGATTTGATTATTTCTACAGAATTGATCTTAAATCTGATATTCTCAAGTTTAGCATTCGAGTTGAATTGCCCCTTCTCATGGTATTTGAGAATGCTTCCATATATATTGGTTGTAGCTGTTTGTCTGATTATTCAGGTGTGGAGTATAGGGAAAGGTGTTTGGGTTTACGGAACAAGTTAGGTTAATATTTGAACTACTTTTTTCCTTATTTATATTAAATGGATTCTGAATTGTATTTCCAAAATCTCCATCTAACCTTAAGTTTCTTTTCTTTGTCCAGAGTATTATGCTATGTTCTTTGGAAGGAAGAGGTATAAGAACAGCTTATTGCCTTCAAAGAGCTACATACTGGTGGGAAATCTATTGGCATTTCAGCTGAACAGTTCTTTGTTATGCGGGAAAGCAGAACAAATGATTAGGGTCCCTGGACCCTATCTAGTTAAAGCTAGTAGCATTTACTCCAGCTGATTGTTGCCATCTGGCAGTGGAGCTCGGTCTTTTTTCCAGAGAATTCTAATAGTTTGTTTTTTTTTTTAATGTGAAGTTTTCAGATTTTATAATACTCTGTGAGCTAAATCTAACACAGGGGCACCAAATTTCTTCTCTAGGGTTTCCAATGGTATAGTTTAGAAATTATATTTGGGTATTTCAAGCTTTATCTGTAGAGGGTGATATTGAAATTGTTTGACTAGATACTTAGTGGTCACACTGATAACAAGTTCTGTCCCTGAAACATTGGAAAATTAATGCATATCTACTTTTTTCCCCTTAAAGTTATATGAAGATAGAAGTAAATCTGAGACTGAGTAGTAGATCGTAGGTTAAGCAAGATTATCAACCCTCATCACTTCCCCTCTAAACTATTAAATTAGTCATTAGGTACTCAATTCTTTAAGTCTCTTCCTTGATAATTATGAAAGTAATTCAGACTATTATGTTTGAATAAAAAGAAAAATTTATAAAATAGAACTCTTGACTTTTTACTTACCATTATTCTCTTTCAGTGAAAACTAGCATTTGAGAGTTTTGTTTTGGGGGCTTTTTTTAGTAACATATTTTGAGATAGGATAGCAAAGCTTGATTATGATAATAAAGACTTAGGACTGTAGAGAGGGGACAATATTAATGAAGTGGCAGCCTAGTAATATTTCTAGCCTCTTCACATTTCTGGTACATGGAAACAATCCATTAGGACCTTTCCTATAGTGGGTACTCAGTATTTATTAAATTGAATGAATATATCTAATGAATTAGTGATGAAATTTTGTTTTGAAAATAATTGCATTCTTTCAAAATGTATGTCTTTGGCCAGTATAAATAAAAGGCTGTTAAAATTTTTGAACCAAACATTTGAAGTCTTGTGAACTCTGCATTGTTGAATTCTAGTGTGCTGAGTTGTTCATAGTAACTGGCAATTTATGTGGTACATACTAGGTCTCTGTGCTAAGCGTATGTGTATTAATTCATTTAATTCCCACAATTATCCTACAAGGTAAGTGGAGAAACTATTTATCTCTTTTGTACACAGAAGATGAATGAGGCACAAAATGCTTAAGGAAATTTGGCAAGGACACAAAGCAGTAAAACCAGAATTACCACTGACCCCAAATCACGGTTGGACCCCAAAGCCTAAGGAAGCATGTAGACTGAAACTTAGGAGATAGTCATTTGGGGCATTTAGGTAATTACTTCTGAAAGTCAATCTTTTGTGTGCTATTGTTTGTGGTTTTATTGTTTTGTTCTTGAAAATGAGGTGGTATGGCTGAATCTGTTAAATTTTCTTTCAACTCCAAAATTCTTAGATTCTAGGAATAATCAATGAAGAGAGGTGGACAATGCTCAAACAGTGAAAATACAAAAAATATTTACCCTTTTGAGAAGCAAGGAGAGTCCAAATAGAACACTCGTATTTTTATTGTAAATTAAAATCAAAGAAGTTGCCTACACTTAGTTCTACTGGTCTCATAAGAATTTTATATAGCTAGAGGTTGAATTTTAAGGATTACTATTTCTCTTAAAGTAATCCTGTGAAGTAACCTAGCAAATATATATTTAACTGATCAAATAGTAGTAGTTTTACTAGAAGATTTTTACTGACATTTTTAGTGATGGGGGCTTCCCAGGTGGCACTAGTGGTAAAGAACCTGCCTGCCAATGCAGGCGATGTGGGTTTGATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGAAATGGCATCCCACTTCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTGGGCTGTAGTTCACGGGGTTGCAAAGAGTTGAACAGGACCAAAGCATCTAAACACAAACAATGTTTTTGTATTGGTTTGGAATTTTTGAGATATGTTAACTGGTTCTTCTGAGTGTACTTAATGATCAGTTTTCATTTGGATATTTTTAGAACTATTCAATAAATAGAAGATATCCAATTAAGTATCCTTTTTCTATGCAGAAGTTCCTTGGAGTTCAAGGAGTGCTGCTTTGCAAACTCAGAGTATTTATAAAAGCTAATTGCAGAAGGTATTGCCAGCCTAAACTATTTCCTTCATGTATATTGTTGTTTCTCAGACCTGAAATACTTATAAATCAGTGCCCAGCAGCTAAGTTCCTTTGCAACAGTTCAGATGCTCATTGCTTTAAACTGAAGTGGAAAAACAACTTTCAGGTGTGATGAGGAAAATTTTCAGAATATTAATCATATCAAATATACAAATAAGCTTTTGAGAAAGTGAAAGATGATTAAGATAGCATCAAGAAATACATACTTCTTTTATCAAGCATTTTTATATTTAATTCTAATATGCTTTGTAGTGGGTGTTTACATTTACAGATGAGAAAAAGGGAAATCTGGGAACCCTAGGAAATATATTTGGTATATGGGAACAGATAATGTAAGTATCAGGACTTATGTGATACATTTTGAATTCAGGTTGTTATATACACTTATCCTTCACAGTTTTCTAGTTACAATGAAGCCTGAGGCACTTGGTTTAGTTCCACATCAAGATCTCTCTTTGGAAGAATTCCAGTCATCAAAAGTTTCATTTTCTCTTTAACTTTTATCATGGAAAATTTCAAACATACTCAAGATTCAAAGAATAACATCAGTACATCACCCATCTTTGGTGACTACCCCTTTAGTAATTTCTGTGGAGCTCTGTAGAAATTGGAACTTCACCATTGACTTGCTATGCCTCTTGAGATGTTTTTCAGTTGTAAAATGATTGTCTCATAAGCACTCTATATCAGAATTGTT TCONS_00170170 s 5' 0 TCONS_00170170 s 5' 0 EMBV3_25809 GTGCTCACCTGTATCAGCTGGCCCCTGTCGGTCTTCGGCTTCCTGGCCACCTTCCTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22380 GCTATGAAGTTCTTTTGTATTATTGTTGGGGGGAGCTGGGAGGAGAAGGGGGAAGACAGC Gene GeneID:613740|HOXC4:NM_001102373:60_cdna Constitutive 0 NULL GeneID:613740 5 GENE HOXC4 MGC137833 homeobox C4 EMBV3_31368 CTGAGGATGGAGAACCGGAAAACCATGAGGCTCCTGCAAAAGGTAAATTCAACTGGAAGG Gene GeneID:537667|LYAR:NM_001031769:28_cdna Constitutive 0 NULL GeneID:537667 6 GENE LYAR FLJ20425 MGC133510 Ly1 antibody reactive homolog (mouse) EMBV3_09388 CGCTATGTGGTGTTCCATCCGTTCCTGGACGAGATTCTGATTGGAAAGATCAAAGGCTGC Gene GeneID:767843|POLR3H:NM_001076962:225_cdna UTR3_Alt 2 NULL GeneID:767843 5 GENE POLR3H MGC134502 polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) EMBV3_17903 TGCAGGAAGGGACTGTTAGTTCTCCGTAGCAAGATGCCAAACCAGTTAATTTTGGAAGAC Gene GeneID:517113|DHTKD1:XM_002692049:33_cdna UTR3_Alt 2 NULL GeneID:517113 13 GENE DHTKD1 NULL dehydrogenase E1 and transketolase domain containing 1 EMBV3_33461 TGGTACATCCCACCCTCATCATCCTCTACAACGGGCTTCAGGAGACGCTGATTCACTACA Gene GeneID:510913|LOC510913:XM_002697838:539_cdna Constitutive 0 NULL GeneID:510913 24 GENE LOC510913 NULL similar to Nose Resistant to Fluoxetine family member (nrf-6) EMBV3_10729 TGGACCGAGAATCAGTGTATTGGGCGTCAGTGTCTTCTGCAAGGGTTGCGACCTGAAACT Gene GeneID:512377|RIP5:NM_001034421:1003_cdna Constitutive 1 NULL GeneID:512377 13 GENE RIP5 MGC127054 RAB5-interacting protein EMBV3_06440 GACTTCAAGGATAGAGTCCAGTCGAAGATTGGGTCCCTGGACAACATCACACACGTCCCT Gene GeneID:281296|MAPT:NM_174106:179_cdna Constitutive 4 NULL GeneID:281296 19 GENE MAPT MGC134287 tau microtubule-associated protein tau EMBV3_33937 TGGCCTGAAGGAGGGTGACTACATCGTGTCGGTGAACGGGCAGCCATGCAGGTGGTGGAA Gene GeneID:618397|RHPN1:XM_002692559:202_cdna Constitutive 0 NULL GeneID:618397 14 GENE RHPN1 NULL rhophilin, Rho GTPase binding protein 1 EMBV3_10227 AATCAGAGATACCAAAGGAACATTTCATTCTCTTCTCCCCCTGCGGCCACACCTCCACAC Gene GeneID:784274|LOC784274:XM_002690314:4_cdna Constitutive 0 NULL GeneID:784274 9 GENE LOC784274 NULL similar to solute carrier family 25, member 30 EMBV3_07392 TGGCAAGTGCTTCAGCCTGGTGGAGTCCACCATCTGGCATGAGTGGGAGATCACCAACAA Variant GeneID:508713|GNPTG:NM_001017428:99_cdna 179^262 2 EMBV3_35361 GeneID:508713 25 GENE GNPTG NULL N-acetylglucosamine-1-phosphate transferase, gamma subunit EMBV3_24680 AACACAACTCATCTCAGTGAACCTGCTTTTATGGCAATGGAAGTCTCATTTTCCCTTGGC Gene BVV0102_351486 + 0 NULL GK000002.2:44818738-44850891 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102387 1 XLOC_061852 NonCoding TCONS_00102387 XLOC_061852 NonCoding NonCoding - 2:44825993-44827371 - TSS76246 578 1 TCONS_00102387_1 48 0.64878892733564 3 0.58242556281772 0 0 0 1.7846172414188e-05 1.33929617535786e-10 0 0.000554919616660314 1.45455198797203e-09 0 0 0 0 0 0 0 0 0 0 2.4812383139732e-05 0 0 0 0 0 1.5496714523598e-09 0 1.40015411400637e-09 0 0 0 NM_001103239.2 FBXO17 Bos taurus F-box protein 17 (FBXO17), mRNA. 6e-45 185 92.13 0.217993079584775 0 noncoding 0 0 0 0 ATGCAGGAGATGTGGGTTCCATCCCTGGGTCAGGAAGCTCCCCTGGAGAAGGAAATGGCAATCCACTCCAGTATTCTTGCCCAGGAAATCCCATAGACAGAGGAGCCTGGTAGGCTACAGACCACGGGTGTGCAGAGTCGGAACTCTGCAAACTCTTTGCACAACTTTGCACAACTGAGTGACTAAACAAAAATAGAACCAAGTCACTATGAGAACACATTCAGCTGATAAACACAACTCATCTCAGTGAACCTGCTTTTATGGCAATGGAAGTCTCATTTTCCCTTGGCAATTCTGGAATTTCCACTAAGATTGTTTTAAAAGCTGATTTTGCATTATTCCAGAAGACAGCTGAGTTCTCAGAAAGTATTCTGCCTTTAATTTATTGTGCTGTGTTGTTTTGTTGAAGAACAGGAAGAAAATCCAGCCTGGCATAGGGTGGTAGTTGGAAGAAGGAACAGTGTTTTTATAGCCTCTTCAAATAATTGTGGATATTCTGCTTTTATGTAACACCAAAACTTGACAAGCAATAGTTTCTTAAAGATTCATTGCAATGTGGAATCTGAAATCAGATGAAC TCONS_00105195 TCONS_00105196 r 5' 6700 TCONS_00105195 TCONS_00105196 r 5' 6700 EMBV3_28369 TTTCCACCACTTAGGGCAAAGTCAGCCAAGCTGCACTCCAATTCTGACAAAGGTGATGGG Variant GeneID:512080|CDH18:NM_001076837:12_cdna 46^529 1 EMBV3_38374 GeneID:512080 20 GENE CDH18 MGC143048 cadherin 18, type 2 EMBV3_03546 TCCTGCCCTCTGTCCCCACAGGCAGCAGCAGTGCACAGCAAAGTCAAGTGTGACACAACA Gene GeneID:508531|MLX:NM_001035061:88_cdna Constitutive 1 NULL GeneID:508531 19 GENE MLX MGC127128 MAX-like protein X EMBV3_36964 GACTTCCTCCCGTGAACTGTGACCTTTGTGGCTTGTTCACTTGTCTTCTGTCGCAGACAG Gene BVV0102_022693 + 0 NULL GK000015.2:85023351-85246726 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060441 TCONS_00060440 1 XLOC_036734 NonCoding TCONS_00060440 XLOC_036734 NonCoding NonCoding - 15:85169389-85173048 - TSS45201 2684 1 TCONS_00060440_3 177 0.381520119225037 4 0.267359212684527 0.00025846809136966 1.28796227413468e-09 7.11338417463702e-30 0.000151864442445801 1.96731629904675e-09 9.94097845158829e-05 3.32179152321742e-45 0.000117068408093527 0.000206747231559203 7.88628088103411e-120 1.02972609922009e-11 1.74329694588458e-187 7.96321963143165e-05 4.73869446384215e-06 3.08421161441172e-54 0 0 0 2.19743387834916e-05 0.000814236770894745 4.5169251443518e-120 0 0 0 5.18827173979474e-05 2.21765623945606e-08 1.82595956718816e-05 0 3.07296150269864e-05 0 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-100 370 90.94 0.0983606557377049 0 noncoding GCAGGGTTCCTAAGGAGGTGCTTTCTTCTCCCCCATGGGGATGGGTTACTTAAGGAAGCTCTTCTATTCCATGGAAAATGTTATGTTTGTGAATATGTTTTGGTTTTGTTTTTCTGAAGAAAGGATCTCTCATGTACTAAGTCTTAGCTTAGTAATCTCCCAAATGGAAAAAAACCATTATGTAAAGACAAGGTGATTTGTAAGGAATAAAAACAAGCTCCCCGACTTCCTCCCGTGAACTGTGACCTTTGTCGCTTGTTCACTTGTCTTCTGTCGCAGACAGACCGTGGGGAGTGGGGCCGGGGCTACTGAACTGAGCTCACAGGCAGAGCAGGTGAGCAGCACGTCATTCAGGTTCACAGTGAGAGGGGAGGCCCGTCGAGGGTTGCCTGGACCCCAGAGGCTCAGGGAGCTCAGAATCAGGGATGGGCTCCCTGGAAGCAGGTTGGCTGCGTCTCTGTAAGCTCCAGGAGTCAAGCCTGGCCGTGAGGTGAAGACCGAGAAACCCCCTCCACACACAGCACTTGTCCGGACCCTCAGGGCCAGGAGGTGGAGATTTAGGAAGGCAGCAGGGTTCACCGTTCTCAAATCTGCATCCCAAGCAAACCACAAGAAACCTTCACATGCAGTTCCTGTTGCTCTCGGATCCCTGCCCAGCCTGACCCATGGCGCCTTTTCGTCAGGAGCACCGCCTTCCACGGGCACTCACCTGGCTCGCGGTGTGGATCCAGGACACCGTGGGGACACGGCTGCTGAGCTGGTGCCTGCCTGCCTCACGCCCTCACCCGAGCTCAGCCCAGCTTGGCCAGGCCCAGCAGAGTCGAGGGAGGAGACGGCCTACAGACAGAGCCTGGAAGGAAGTGTTTAATCTTCAGGAGGAAGAGAAAGTAATGCCTCCGAAGCAATGTGCAGGGAGGGAGCCCCTGAAATTCTCTGAGCTAATGAATACCCCCTGGACAACCTCCCGAACTGCTGTGACATGATAATTGGACCTAATGTTGTAATTTTAACACTTTTGACACATTTGACTTTTACTAATGAGGCTAACTGTGCGGGCGGGGTGACTGGCAGCTGCTGCTGCTTGGCCCTGAGGTTACTCTCGTTTGTCTTTGATGCAAATTGCCTTCCACCAGGGACCCAGCGTGGGAGAGGTCACTCTGTCTGGATGACTTGGAATTACTGTCTGGAAAGTAAGGAAGCCTGGGACCACCGACAGGTGAGGGAGGCTCGGGATCTGGGTGAGGGGAGGATGAAGCTCCAGTCACTGGAAGCTTCGCCCCCTCCCTGCCCCCAGGGCAGTGGGCAGCTTCAGCCCTGTGAGGCTTCCTGTCCAGGAAGGAGGCCCTGGGGTGGGGGTGAGGTGCCCATGCCCCTCTCTCCAGGACCCAGGCAAGAGCTGGTCTGGGCCCCAGGGGCCAGGGGTGGAGGGAGCCCCAGTCTCCAGTTGGCAGTTGGAGACTGTGGCCCCGCCAGGCTAGCCCTCCCGTCTCTGGCTCCCTGGTCTGCACGGTGACCTGCGACTCTGCCCTTGTGTGGTGATGGCTTTCGTCCGCAGGGGCTGCCTGCGTGTCAGGGACGTTTTGTGGGGGGCACCCTTTGAGAAGGGGACCCCACTCTGGGTTCAGGCCTCCCCACTTGCATCGCCCAGACAAGTCCCCGCTTGGCATGCGCTTCCTGTTCCTTTGTGTATTTACTGCACTGCGTTGGCTGATATTTTATTAAGTACTTGCTTCCATTTAATGGAGGATATCTTTCTATAGTTTTTTTTTTTTTTTTTAACTATTTTGTGGTCTTGATATTGTAATGTTGGCTTTAGAGATAAATTGGATAAATGTTCTCCCTGGTCTATTTTAACAAAGAATTTGAGTACTATTTGTATTATTTCACACTTATGTGGAAAAAATTCTTCAGTGAAGCTGTCTGGGTTTGACATTTTATTTGTGGGAAATTTTTTTTTGTAGATTTAATACTTTTAATAGGTGTAGTGCTCTTGCCTGGAAAATCCCATGGACGGAGGAGCTTGTTAGGCTGCAGTCCATGGGGTCGCTAAGAGTCCAACACGACTGAGCGACGTCCCTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGACAACCCACTCCAGTGTTCTTGTCTGGAGAATCCCGGGGACGGGGGAGCCTGGTGGGCTGCCGTCTCTGGGGTCACACAGAGTCGGACACGACTGAAGTGACTTAGCAGTAGCAGTAGGACTATGCAAATTTTATATTTTATATTGATTCATTCTTTTTGTCCTTCCCAAAATTAATCTATTTCACTGAAATCACCAAACTTTTTGGCATGAAATTGTTCATGATGAGTCATTACGGTGTTAATGTCTGCGCAGTCTGAGGGTTTCCACTCTTCCCTTTCTTCCCTTCAGTTTATGTCCTCTGGGTACTTTGATCTTCTTTTTCCACTGTAAAGGCTTAATTTATGCAATTCTAGGTCTTTTTTTTTCAATTATAAGCATGTAAAGACAGAAACTTCCAGGTAGCATTATTTTAACTAGATAGCACAGGTTTCCGTATGCTGTGTTCTCATTTTCAATGTATTTTCTAGTTACCCTTGTGCTTTTCTTTCTGTGACACATGGGTTACTTAGAATTATATTGTTTGATTTTCATATATTTGTATATTTTTACATATATTTTCATAACTCAT TCONS_00062702 r 5' 46364 TCONS_00062702 r 5' 46364 EMBV3_42607 GAGGAGGAAGCTGTTGCCATAGAGATGAATGAACCAGTTCAGCTAACTTTTGCACTGAGG Gene GeneID:515499|PCNA:NM_001034494:35_cdna UTR3_Alt 3 NULL GeneID:515499 13 GENE PCNA MGC128125 proliferating cell nuclear antigen EMBV3_36032 CGCGGGGCTCTCGTCTGTGAGCAATGACTGCTTTCTTCTTCAACGACAAACTTAACTCCA Gene GeneID:613987|TMEM100:NM_001046522:29_cdna Constitutive 0 NULL GeneID:613987 19 GENE TMEM100 MGC137256 transmembrane protein 100 EMBV3_34026 CGTACAGTGGCTCCGTTCCCAGATAGCAATCGTTTCTCAAGAACCTGTGCTCTTCAACTG Gene GeneID:536724|ABCB5:XM_002686705:5_cdna Constitutive 0 NULL GeneID:536724 4 GENE ABCB5 NULL ATP-binding cassette, sub-family B (MDR/TAP), member 5 EMBV3_37831 CATGGCATTCAGAGCCCTATCAAAGCTAGATCCCATCTTTCCAGACACACTTATCTCTTG Gene BVT0102_398414 + 0 NULL GK000030.2:92903881-92927860 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08019 AACAGCCGTTTTTAAAGGCTCAACCCCAATCCCAAGTGCTGAAAAACCAGAGGCTGAGGG Gene BVT0102_401376 + 0 NULL GK000023.2:27225120-27225265 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132843 TCONS_00132846 TCONS_00134522 TCONS_00132850 TCONS_00132847 TCONS_00132848 TCONS_00134521 TCONS_00132849 TCONS_00132845 TCONS_00134523 TCONS_00134520 TCONS_00132844 2 XLOC_080898 XLOC_081436 Coding TCONS_00132848 XLOC_080898 Coding Coding RDBP 23:27219322-27228363 j TSS99310 4483 3 TCONS_00132848_1 132 0.0234218157483828 10 0.505199115044248 0.00203871366661877 0.000676767380871346 0.000268391107940141 0.00159262532767173 0.000623761190420298 0.000402979499714874 2.74139931358069e-07 0.000334186031298187 0.000535568297580276 0.000132488589056888 3.19071795441711e-05 7.03850010251275e-05 8.17476931178549e-06 0.000234095579229839 1.04798282042463e-10 0.00196354464457307 0.0015217791494125 0.000938100963115984 0.0018350730279939 0.000631126559210328 0.0004793010170895 0.00109982495683027 0.000930400449711898 0.000791377047984898 0.000484804258390829 0.00145559217973089 0.000995742754162464 0.000101441935954612 0.000152180710032241 0.000546008663657217 NM_001076204.2 NELFE Bos taurus RD RNA binding protein (NELFE), mRNA. 0.0 2030 100.00 0.25072496096364 NM_002904.5 NELFE Homo sapiens negative elongation factor complex member E (NELFE), 0.0 1712 89.49 0.282400178451929 TCONS_00132848_2 sp|Q0V898|NELFE_BOVIN NELFE_BOVIN Negative elongation factor E; 3e-77 236 100.00 0.990909090909091 3 coding 1 0 1 0 -1.25856367330342 0.0149650014689945 0.00833972478976956 0.876438876152603 GGCCGCCTTGGTTACCGCGTTCTCCGCCCCTCGCTACGTCATCGCTCTGAGCCCGGGATCCGCTGCCCGCGCGGGCGCCGCCCGAGACCGTGGGGCCCCGGTTGCCGCCCCCTCAGAAAAAGGCATTGCTGGCTCTGAAGAAGCAAAGTAGCAGCAGTACAGCCAGCCAAGGCGGTGTCAAACGCTCACTGTCAGAGCAGCCTGTGGTGGACACAGCCACGGCAACAGAGCAGGCCAAGCAGCTGGTGAAGTCAGGAGCCATCAGTGCCATCAAGGCTGAGACCAAGAACTCAGGCTTCAAGCGTTCTCGGACCCTAGAGGGGAAGTTAAAGGACCCTGAGAAGGGGCCGGTCCCCACTTTCCAACCGTTCCAGAGGAGCGTATCTGCTGACGACGACCTGCAGGAGTCGTCCAGACGTCCACAGAGGAAATCTTTGTATGAGAGCTTTGTATCTTCCAGTGATCGGCTTCGGGAACTGGGGCCAGATGGGGAAGAGGCAGAGGGCCCAGGAGCTGGCGATGGCCCCCCTCGAAGCTTCGACTGGGGCTACGAAGAACGTGGTGGTGCCCGTTCCTCAGCCTCCCCTCCCCGAAGCCGCAGCCGGGACCGCAGTCGTGAGCGGAACCGAGATAGAGACCGAGATCGGGATCGAGAGCGAGACCGGGAGCGGGACCGAGACCGTGATCGAGACCGGGAGCGGGACCGAGACAGGGACCGAGATCGAGACCGGGACAGGGAGCGCGACCGAGAGGGCCCTTTCCGCAGGTCAGACTCGTTCCCTGAACGCCGGGCCCCTCGGAAGGGAAACACTCTGTATGTGTATGGCGAAGACATGACGCCCACCCTCCTCCGTGGGGCCTTCTCTCCCTTTGGAAACATCATTGACCTCTCCATGGACCCACCCAGAAACTGTGCCTTCGTCACCTATGAAAAGATGGAGTCAGCAGATCAGGCCGTTGCTGAGCTCAACGGGACCCAAGTGGAGTCTGTACAGCTCAAAGTCAGCATTGCCCGAAAACAGCCCATGCTGGATGCCGCCACGGGCAAGTCTGTCTGGGGCTCCCTGGCTGTCCAGAATAGCCCTAAGGGCTGCCACCGGGACAAGAGGACTCAGATTGTCTACAGCGACGATGTCTACAAGGAAAACCTTGTGGACGGCTTCTAGGGAATGGAGCTGGATTCCGTGTGCCTCGTCTGCCCCAACGCTGGTCTCAGTAAAACACTGAGGTGGAAGCTCACCCATCTCCCTCAGCCTCTGGTTTTTCAGCACTTGGGATTGGGGTTGAGCCTTTAAAAACGGCTGTTAGATGTGATCTCAGTTGTAACCACATGGCTAGTGCACGCTCCCCACTCCTTTACCCCAAAAGGATCTTGAACACAGGTGTTGTCGCAGCTGTTTTAATTTGGTCTCATGCCCCTTTCCAGCAGGAAACCCCTTATAGAAAACCCAGATCCTCATTTTGGAGTTTTTCCTTGAGCCAGGGCAGCACCTGGTAGAGGTTGATGTGAAAGTCTCGAGCATAACCAGGTACTTGCTGTGGCCGCTTGCAAACATCCACGACGCCCCAGCTGATCACGCCAACCTGGAGAGAGCGAGGGGTTGCCAAGAATCATTTAGTAGAACTCCTTAATCCCAGGAAGCACAGCTACTGCCAGTTGCATCTGAAGTGACCTGACCTGGGAGGACTAGGGACCCAGTTCAGTTCTGTCCCCTGGCACACAGACCAGACACATGGCCCTGAATTGGCCAGTTCAAGGAAGAGTCTGAAGGTGAGGCAGGCTCTGCCCCACCCCCCACCTCTTTTCAGCCACATGCAGTGAGCTTTCCTGTTTTGGGGCCCACGCTGACCACTCAGCATCTCTCCAGAGAAAGGAAAGAGAAGACTCACTTGAATGAAGCGACTCCTCTTGTGAATAATCAGGGGGCCACCAGAATCACCTGCAGGGAAGGAGATGCTGTAGGAAAAGACTTAGGCCTCAGAACTCACATCACAACCAAAGAGCCTTCTCTCACCTTTGCAAGTGTTGGGGTCAGCGTAGGGATCCACACCTCCAGTGCAGAGGAACCTGGGGGTGACTACCTCAGAGACGTCCTTGACTTTTTCATAACCTGGGGCGCGTAGAGCATCTCTCTCACAGCTGGCTTTCTGTAGGTGAGATAGGGAAGTGTGGAGAGAGGTGTGAGGAACAAAGCTTGCTTAGGAAGGACTGGGGCCTAAAGGACCTCAGGATCCCACATTCCTCACCTTGTCCCCATTCTTGATGTAGACTGCCTTCCGAGTCAGGGTCTTCTTAGACTCAGACACAAACAGAGCTTCAATGTCCTTTGCAGGGAGTAGCTCTTGCACTTTACAGATGGATAGACTGGGTCATTGCAGCACTCTCCCTCCCCTCCCCGCCTCGTGCTTGTCATCGAGTGGCCCTCCACTCCTTCCCGTGAGCTGGCGGCTGGGCAGGGCATGACCTGCTCTCCCTCCCCCTCATCCCTTCCTTGTCTCAAAACTTCACCCTTAACAAGCTGCTCTCCCTGAATGTCTCTTACTCTGTTGCTGGCATGTGGTTGACCTTGGAAGCCTCAAGGCTTGAATCGATCCCTCAGTGCAGGGGAGACAAATGGGCCTGTTGAGGAGAGATGGGGAAATTCAAGGATCGTGAACCCTGGGCCTGCTACTGTCTCAGTTCTGCCTCTCCCAGCCTTTTCTCTCAGAATCCAGATGGCTCACCTGATGGTGGTCTCATACTTGAGCTTTTCCTTGAGCCTGACGAGGGCCACGTCATAGTCATAAAACTCAGGAATGCCTTTTGCTTTTTTTGCATTGAGGTCGTACTTCGGATGAAATAGGATTTCTTTTACCTCCCACTCCTTCCTCTGTCCTCCTGAAGTACAAGAAGGGGTTCCTCTAGACCACTGAAATCTGTGTAGGCAGCCTCCTGCCTGCATGTCATCCCTAACCCAAATCTTCCCCATCCCTAACTTGTCCAGCATGCAAGGGAAGGGCTGCGATGAGGACAGGTGGAAAGTGGGCCCTGGAGGCAGTGTGGCCCAGAGGGCACCGCAGAAGCTCAGAATTGATGGGTTGCATCCTTACCCAGGCTGACCTTGATTGAGTGTTTCTCATCATCCACAGTGAAACAGTGTGCAGCCGTCAGCACAAAGTACTCAGACACAATAGCACCCATACAGCTCTCATGCCCCTTTGAAGGGCGCTGGGGACAGCAGCAGAGGGAAAGCTCAGCTTTCACAAATCTCACAATCTGATCAAGAGTGCCTTGCCCTTCCTCCGACCTTCATTTCACCCTGACCTCCCTTCCTCTAAGTTCCCACCACCAGGACACTGCACTTACAGTGACCGAGATCTTGGCCTGCCACGGTTGCTTGTGGTAGGCAGTACCATCCTTGTGCTCCCAAACCATGCCACAGAGACCCAGTGTCCGGCTTTCATCTGACAAGAAAGGAGATTGTGCTAAAAGCTGGGACAGTTCATTTCCAAATGGCAGCTGTCTTGCGGAGGGAGGCCAGTGTGTCTGTGGGGAGCAGATGCCCAAAAGAGGGAAGGGAAGGCAAGGAACCACTGGAATCATGGGACTAAGCTCAGAGACCTGGGCATTTTCAGGCCCAACTCCTGCTAACTTGCCATTTCTTGACCTCTTTTGGCCCCAGCTTCCATATCTGTAAAAGGAGGGACTTGAGAAAGGTCTCGGCATCATTTCAGAACTCATGATTCTGAGATCAGGGAGTGGAAAGTACCAGGAAGCAAGAATAGTGACCTGGAGGTAGAGGAGGAAAGAAAGGGCTTCCAGACTTTCCAGGGCTTTAGGAGGAGTGGAAGAATGAGTGACCTTGAGGGGTCTGGGGAGAGCTGAGTTTCCTGACCATCTCCTTATAGCCTTCCATAGCTTCCTACCAAGCATTTGGACGAAAACATCCTCCAGGTTTTCCATGCCTTGGAGTTTGAACACGTGTTTCTCTTTATCCTTCTTGGAAGCCAAAGCATTGATGTTCTCTTGGTTCACTAGAGGTCCAACCCCGAACACATAGATATCTGAGAGAGAAAAAACAGAGTGAGAGTCTTGGCCCTGGCGCAGGCAAGAAGCTAGTAAAGTGGGGTGCTGGGTCCTAGGCAGTAAAACTCACCCAGATAATCCTCCCTGGGGTTTTTGCGATTTCTACCAATGTCTAGCAAGTACCGAATATCGTGAATGACAGTGACTGGATCCCCACCCATGTTGTGCAAACCTGCAGGAGAGACGGACAGTGAGGGTGGGGAGACATGAAGGAAGAGGGTCCAGGAAGACAAAGAGGCTGGAAGGAATGACATACAGGGCTGAGTGAGCAGGTTGGAGAGGAGATCATGAGTGAGAGATCACGGAGTGGAGGGTCCCTCCTTGTAAAGGCACAAGGAAGAGCAGCACGCCATCCCCCACCACAAGTCCAGTGTTACATGTGGACTTGGGGCCACGGGCTGGTTTGAGAGGGTGGGG EMBV3_17940 TGTGTTGTAACTACTACGGCAACTCCTGTGGCTACGGCTGTGGAAAGACCTATAGCTGTG Gene GeneID:781919|LOC781919:XM_002684618:100_cdna Constitutive 0 NULL GeneID:781919 1 GENE LOC781919 NULL hypothetical LOC781919 EMBV3_41899 TGCCCATTTTTATGCCATTTGTGAGCAGATCAGCCCTGTCCTAACCTGGGGCTTTTTGGG Gene GeneID:790477|LOC790477:XM_002686298:172_cdna Constitutive 0 NULL GeneID:790477 3 GENE LOC790477 NULL hypothetical protein LOC790477 EMBV3_10300 GATACAGGCAGTTCCTTGGTGGCCTAGTAGTTAGGATTCAGGACTTTTACTGCAAGGGCC Gene BVV0102_009179 + 0 NULL GK000026.2:17466938-17504713 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02348 CTGTATAGTACATAGGGTCACAAAGAGTCGGATGCAACTGAGAGACTTTCACTTTCTGCC Gene BVT0102_136815 + 0 NULL GK000021.2:50446028-50605950 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121490 TCONS_00121489 1 XLOC_073421 NonCoding TCONS_00121490 XLOC_073421 NonCoding NonCoding - 21:50593512-50638942 - TSS90492 2309 2 TCONS_00121490_1 94 0.168904287570377 3 0.949239472583592 4.01395869110471e-05 0.000251646651105175 0.000129269251380879 6.61734805693314e-26 1.44304161368341e-22 2.96289629361493e-68 0.000152303108728067 1.47421528751392e-53 1.42548783407914e-62 6.05489770809683e-22 0 0 6.08570665456251e-28 6.29320220539624e-28 3.23855390861785e-05 0 0 0 3.59929407066908e-74 2.91498088320848e-05 9.33737384470976e-26 0 0 0 4.81256347015866e-06 9.67081630425202e-05 0.000537647387951131 0 1.32574467229457e-16 0 XM_005228079.1 RP2 PREDICTED: Bos taurus retinitis pigmentosa 2 (X-linked recessive) (RP2), transcript variant X1, mRNA. 1e-60 239 87.24 0.0844521437851884 0 noncoding 0 0 0 0 -0.237927594143296 0.452771566959087 -0.00368070284290331 0.940323596920007 CTTGCACCTGCTAACAAATTTCTTTTGATTAAACAGTCCAAGGGCCCAGGAGGGTATCAAAAGCGAAACTTAAAAATATTCTAACCGAATAAAACTTAAAATACAACTTATTAAATTTACCAAATGCAGCTAATGTGTGGCTTAGAGGGAAAAGTTTAGGAGTTTTGAAAATTCCTAGATCTTTCGAACTCTTGCCGGACCCCAGAAGTCTTAAAAACCAAGTGGCATCTCCGGCACGAATATCTGGCAGCCCCGAGCAAGCCGTCGAGGAAAACGTTAGTTCTTCTTACGTACCTAAGAACTCCCCAGTCCTGGACGGCTCTCTGGGGACGTCTTCTCAAGACAGAAGAGAGACCCACACAGCACGGAAGGAGAAAACTGGCGTGGTGTCTGCGCCTCCACCGCTTGGCCCCTAGAAGGAGCCCACAGAGCTCGGGCCCCTGGCATGCCGCAGCCACTGCGGAGTATACGCCTAGCCCGGAAAACACTGACCTGCCTGCCCTCTGAAGGCCGGAGGGGCCACGCCCCCACGTCCTCAGAAGGAAGAGCCAATGCCCAAGCAGACGACTCTTCCAGGAGTGGGCTCCTAAAGCCAGAATTTGACGTCTCTGAGGACGCTGCCAACAAAAGTCCCCCAACTAACCCCCTCACCAAGGAAACTGGGAAAAGGGGCCCAGCCTCAAACCTCCCTCCTGGAGACCAAGGCAGGAAAAGGCCCCGGAGCAGGTAGAGGAGGGCCTTATTCCCCCTCCTCTGCTTCCCGCGTGGACTGGGACGAGCTGGGTAACCCAAACTTTAACCTGTTCCGAGGTTGCAGAGAGATCCGGCTCCCCACGAAGACTCTCAAACAGGCTGGCGGAGCCTGAGGCTGGAGGGCTCAGAGCAGGGTCTTTGACGACCAAACTCACCTCGGTGGAGCAAGGTGCTTTCCGCCTCCGTTGGATAACACCCCTCAGCTGTAGGCCGGGGCAGGGACCGCCAGGAGCAGCAGGCAAGCCTGGGATTCTCTGGGTGTGCGGGCTTCCGCCAGCAGTGTGGTCGGTGAGCCCGGGGCTCATCCCCTCCTCCGTGTGGCCAGAGCTGCCTTGGATGTGAATGAGGAGCACCTCTGACCCAACTGAGCTTCCTGGTACTGGGCGGGGTGGATGGACTCTGGAGCAGTTTGGGGCATCCCTGGTTAAGGAAGCAGCCTGGAGGAAACAGTCCTTATACTTCAAATTCCACCTTCTCCTTTAAGGAAGGTCCACTAAGACCCGGGCCCGTGAGACCAGCTTGCACGCGCACCGGAGGCCAAGCTCGTAGAACCTGGTTTTCCGCAAGCTCCGGATATTCTCCGGCCTGGCTGGCTTCTCTGTATCCTCCTTGGCGTGGGGATCTGCTGCTGCCTGTGGGGTGCATCATGGACATGCTGCCGCCGCACAACAAAAATGCGTGTTGAGAATTGCAGAGTAAGAAAGGAAGGCCAGAGATACCTGACACGGAAGACCATGCAGGAGAGAAACCAAAGCTGGCAAAAGAGGAGCTCGCCCAGGTCCCAAATCAGGCCCAAACAGAGGGCCTTCAGATAAGTGTGAGGAAAGAGGAGTTAGTTAGTTAGTTAGTTAGTTAGCATCCACTCCCTGGAGACCATGGCAGAAGACAGCAATGACCAGAATCTGTGATGACCTCATTCTCCAAGTTGGAGATATGACATGGGAGTCCGGAAACTGGGAAAGTGGAGCTGAAATCAATTCCATACTATTATCTCTGCTTTTAGAAAGGTATCTCAGATCTTCTGCCGGCTCACTGGTGAATTCTTCTGTCGTGGCCTGCAGAGTTTTTGGAGGTCCACTCTGCCAAAATTGGGCTTCCCTTGTGGCTCAGCTGGTAAAGAATCTGCCTGCAATGTGGGAGACCTGGGTTTGATCTTCCCAAACTGGGTTGGGAAGACCCCCTGGAGAAAGGAAAGGCTATCCACTCCAGTATTCCATCCTGGAGAATTCCATGGACTGTATAGTACATAGGGTCACAAAGAGTCGGATGCAACTGAGAGACTTTCACTTTCTGCCAAAATCTATTAGTATGTCCATATTCTTTCCCCAAACCTCTTTCTCTAGATTCAGTTATATGTATTTTGGGTGTATCATGTTTTAGTAAAATACTACTTTATTCATCCAGCATCACTTTTATCTTGCGAATGGCATTTTGTTCATTTTACAGGCATAATTTTAAGGGATGGTAAATAATTTAAAAGTTTTAATAAAAGATTAGATAACGGGCTTCACTGAATCTTTATCCTGAGATTATTTTTAGTGATAACCTCTGAGTTA TCONS_00119688 r 3' 41526 TCONS_00119688 r 3' 42009 EMBV3_26184 CCTGGCACCTAGTAAGCGCTCCGTACAAATGAACTACTACTGGCTCACTGGCTCCTCTTA Gene GeneID:100296812|LOC100296812:XM_002694496:370_cdna Constitutive 0 NULL GeneID:100296812 17 GENE LOC100296812 NULL hypothetical protein LOC100296812 EMBV3_12314 CTCTGAGTGCTCTCCTCCCCAGTCCGTCCTGATCATCGCTAATCACAATCACCAGAATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09469 GTCACGCCTGCCCCATACAACATGGATATACTTCTACTTTGGTGTCCAGGAACAAGCTGC Gene GeneID:506944|SFT2D2:XM_002685816:16_cdna Constitutive 0 NULL GeneID:506944 3 GENE SFT2D2 MGC155147 SFT2 domain containing 2 EMBV3_25719 AGGGGTGCGCCCAAGCGGGGCTCAGGCAAGGATGGACACCACGCGGCCAGAACCACCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17339 GCTGCAGGTAATTTTCAAGGTGTGATGGAATTTTAATGGAAGCCTTGTATAAGTTAAATG Gene BVT0102_115330 + 0 NULL GK000006.2:26143563-26152252 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202829 TCONS_00202830 TCONS_00202831 1 XLOC_124041 Coding TCONS_00202829 XLOC_124041 Coding Coding DNAJB14 6:26105475-26148105 = TSS152087 6344 1 TCONS_00202829_4 379 9 0.851392244716038 0.000317353278659372 1.27261260306225e-07 0.000125403355620331 0.000122240682288601 1.15010005949922e-06 0.000116632576844334 4.38497914974378e-05 1.61692089931758e-08 4.73882807827695e-05 1.14105579910506e-08 2.62301809683638e-16 1.18505963628027e-05 3.26839665556881e-09 4.58961236411726e-13 2.67283369202572e-08 0.00183693579084568 5.05651504010767e-06 0.00205580925065243 0.000176083723550889 1.56002840188385e-15 3.27470890078254e-08 0.00102774888282208 0.000929263990037666 0.00164246863853083 0.000205424297212905 7.30697980279281e-05 7.18200569605667e-05 8.54348492055843e-09 1.05524544080437e-07 0.000138180417131622 XM_005207700.1 DNAJB14 PREDICTED: Bos taurus DnaJ (Hsp40) homolog, subfamily B, member 14 (DNAJB14), transcript variant X1, mRNA. 0.0 3249 100.00 0.283732660781841 NM_001031723.3 DNAJB14 Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 14 (DNAJB14), transcript variant 1, mRNA. 0.0 5584 80.58 0.941834804539723 TCONS_00202829_4 sp|Q0IIE8|DJB14_BOVIN DJB14_BOVIN DnaJ homolog subfamily B member 14; 0.0 791 100.00 0.997361477572559 2 coding 0 0 0 0 0.045605699758604 0.705981064828297 0.00821363547663496 0.900549476027599 CCGCCTTCGCGGGCCGCGCTGGGGGTTGGAGGGCATCGCGTTGCTGAGGCTGGCGGCAGGGTCCACGCCGCGACGGAACCCCTTCAAGAGAGCCCCTCCGGCGGCCAGCCGGCCTGGTATCGCCCGCACGCCCCCCTCACCCTCCAGCGGCGGCGGCGGCGGCTTCCGCCCCTCGTTGCTGAGCTCCCGCAGGAAACGGAAGAAGGCGCAAGCCATGGAGGGGAACCGGGATGAGGCGGAGAAATGTGTCGAGATCGCCCGGGAGGCCCTGAACGCCGGCAACCGCGAGAAGGCCCAGCGCTTCCTTCAGAAGGCCGAGAAGCTCTACCCACTGCCCTCGGCCCGCGCACTGTTGGAAATTATCATGAAAAATGGAAGCACTGCTGGAAATAGCCCTCATTGCCGAAAACCATCAGGTGGTGGTGATCAAAGCAAACCTAATTGCACAAAGGACAGCTCATCTGGTAGTGGTGAAAGTGGAAAAGGCTACACCAAAGACCAAGTGGATGGAGTTCTCAGCATAAACAAATGTAAAAATTACTATGAAGTACTTGGAGTAACCAAAGATGCTGGTGATGAAGATTTGAAAAAAGCTTATAGAAAGCTTGCTTTGAAGTTTCATCCAGACAAAAACCATGCACCTGGAGCAACAGATGCTTTTAAAAAGATTGGAAATGCTTATGCTGTTTTAAGCAATCCAGAAAAACGAAAGCAGTATGACCTCACAGGCAATGAAGAACAAGCATGTAATCAGCAGAACAATGGTAGATTTAATTTCCATCGAGGTTGTGAAGCTGATATAACTCCAGAAGATTTGTTTAATATATTCTTTGGTGGCGGATTTCCTTCAGGTAGTGTACATTCATTTTCAAATGGACGAGCTGGTTATAGCAATCAACATCAGCATCGACATAGTGGACATGAAAGAGAAGAAGAAAGAGGAGATGGAGGTTTTTCTGTGTTTATCCAGCTGATGCCCATTATCGTATTGATCCTCGTATCATTATTAAGCCAGTTGATGGTCTCTAATCCTCCTTATTCCTTATATCCCAGATCTGGATCAGGACAAACAATTAAAATGCAGACAGAAAACTTAGGTGTCATTTATTATGTCAATAAGGACTTTAAAAATGAATATAAAGGAATGTTACTACAAAAGGTAGAAAAGAGTGTGGAAGAAGATTATGTGACTAATATTCGAAATAATTGCTGGAAAGAAAGACAACAAAAAACAGATATGCAGTATGCAGCAAAAGTTTACCATGATGAACGACTCCGAAGGAAGGCAGAAGCCTTAAGCATGGACAACTGTAAAGAGTTGGAGCGGCTGACCAGTATTTATAAAGGAGGATGAATGGGAATTTTATTTATACCTTTTAGAGTACTTTCTATTTTTTCTGTAAGTTTAGTTTCATCATGAGAGCTAAAGAAAAAGATTTGATATTGAAAACTAAACTGAATAGTTGATCCTGAAATCTTGGACTGTTTATGACCTACTGGCTCCTTTAAATAGTAAGAAAATGAAAACTAAAATTATTATTTTAGTTATGCTTCTGTAATTATTTTTACTTTAAAAGCTTATATGATTCCTAACTAAAAATGTCTTGAGAAAGGATTATCATACCTGTAGCAATTTCTGGTTTTTAGATCCTCCATTTTTTTCCCTTGTCATGTAAATATTTATAGAATGATCATTTTGTGTATATACAGTTTATTGCCTTTTTATTTAAATTCTTTTGGGTTTAACTCCATGAGACACTTTAGTTTAAATTGATGGAATAAATGTTTTATGACAAAATTACATTTTTCTTGTCAGATGTCAAATGTGTGGAGTTTACAATGAAACTTTATCAAAAAGAGAAGAAAAAAAACAGAAGCTGTTTAACTTGTGTAAAATCTTGTAGCATTATCAGCTTAGATAAAATTGATATTTTTAATATTGCCATTATATTCTAAAGTATATATTGAGATAAATGAACTGGTGTAAAGTATCATTTTGCTATTTATTTAGTTTATGAATTGCTAAGCCATGCATAGAAATGAAATGCTATACTGATAGATTCTAAAGAAAATATGAGGAAATGGCTATATAAATATTAACCAAAAAGGGTCTTCAGCAGTAAATTGCAGTTACATCATTTGCAATTCCAATAACTAAAAGGCCCCCACATGTTCATATGTACATCTTTGAAGGCTGCTAAAATTTATGAAGAAAAGGACCTACCTGTTTTACCCCTTGCCCCGTGGAAATCTGCAGTTTCTTCTTAGTGATCATTTAAGCAGGATCCAAAAGTAAATGGGTTCTTACTATTGTCTAAGTAATAAGAAAAATTACTACTAAAATGAAGCTTGTGCCTTTTAACCTGATTGCCAACTGTTAAACATATACGTAGATTACAGCACACTTACTTGATCAGAGCATGATCTGTTTGGCCATACGCACAGTGAACAGAAATATAGCAGCAGGTAGAATAGTGATTTATAGCAGGTTATCTTTACAAAATTTGAGCTCAGATTTATTCACCATTAAGTAATTCAGTTAATCCTATAGGAATAAGCTCCTTACAGTTACATCCAAAAATGTAAATTAGAAAAATTGAAGTTTTTGGTGCCTATATATGAGATATGAAGCTATTTGATTTCTAGTCTTCTATGTTTTAACAAGTTGTAGTATTTTAATGATTTTGCTTTCATACTCATTTAACAGAACATAAACACATCTTTGGTTTTTTTCTGTGTGTAGGAGAATGCTGGTTAGAGCGTGGTGTTCTTTTATTTAAAGTTTTTTTCCTGAGTATAATTTATATAGCATATGTTGAATAGAACTTCTGAAATGACCATTCTTTTTTAAATGTTCTCTTATCAATAGAAATGCCTTGATTGAATTAGTCGTTTAACTAAACAAGATACTGTCCTAGAAAAACTGGACAGCTTAACCAACTTTCTTTAGAAATGTAACCTTAAAAAAAAAAAAATAGCATGCCTAAAAGAAAATATAATCTAAAATGTTTTCTTCAGCCTATAGAATGAGTTTCTTAAAAAAATAAAGTAATAGCATTCTAATTAACTGAAAGTTTATATGCACCAAAAAACTTATAAAAATTTAAATGAAAAAATTCCATCCATTAATTTTCTGGTTTTAATGGGAAATTTACACTATTGTGATTCATGTTTATGTGAATTGAACTCTTGTTGACTGATTGTTTTTCCCTTAATCCTGATTTTAAAGGAACAGGTGAAGTTAATCATGTTAAGTGAAGTTATATATTACAAAGTCATACATGGCTTTTGGACAGTATTATATTTCAGTTGCATTACATCAAATTTCATAAAATGTGTTTGATAAACTGTTCAAATGACTTTGGTAAAGGACTGATCGAGTGCCTGACAATTTAAGCTACATGTAAAGTATGCAAGTAAAGAGTAAGTCCTTAATGTCACCTATGTCATGATGTAAAGGCCCGTCCAAGTAAGTGTCTTAGAATCTTGGGTTAATTCTACAAAGTAAAATGACCTAATCTGTTTGTTTGTTTCTGTAATCAAAGTATAGTTGATTTTCAGTGTCAGCTATCTTAAAACATAAGATTATCACTTTTTCTGCTCTTCTAACAAAAATCCCAATGTTTAGCCGTCGTATTTTTAGCTACCTGAGCTCTCCAATTTAATGTGATAACTTGTCCTCTTTATTCTAATCATTGCCTAAATGCTCTCAGTCTTTGATTGCTTTACTAGCTTCTCTGACTGGTATTTTAGAAGTTTGGAAGCAATTATATTAATGCTTTACATTTTTATCCCTTTTAAACACACACACAGACATCAGTGTTCTTGCAGGAATTTGGGGGAAAGTAAAATAGTACCTTTTCTCCTCTTTTGATTTTTTTGTTTCCCGATAGATGTTAGTCCTTTGTAAGTTTTGGAATTTATTGTGAGCAAATCTGAGAATTTAATTCTTGACAATGAGAAATAATAAGTGAAACTATGTTTTGGGAACAGACTGCATTTGAATGTTTAAATAAGTATTTGTTTCGTAATCATTCCATTCTTATTTATGATCTACAAAGATTTGGTAGAGAAAAGTAAATCCTTAAGGTACATGTGTGCCAGTACATTAGGCCTCTCTGCTTGTATGTCACCTCAGGTTTTATTGGTAAGAACAGGAAGATAGAATTCCAGCTCTTTATGTTAATTGCACTTTAATGCTTAAGTGTTCTTCCTGTTGTATCTTTAGTTACACTAGTATGTAAAATAGATCCTGAGAGAAATGATTAACCTCTTGACTTCCCTTTGTTGATCTGTAGAATTTTTAAATGCAGGTGTTATTTAACAGATGTGACATGTTAATATTACTTAATAATTCATTCAACAGATTTCATTTAAAAACTCCCACCTGTGTAAAGGCAGTGAAATATTCCATGATGTTGGCCTGAGGACCAATAAGCCGTCTTTTAGTTAAGTAAGAATTATGTCAAAAGACCAAAAGATTCAAAAGGAGAATTTGTGCACTTACTTAGCTTCTCCATATGAAGCTTGTGTTCAGTATTACTATACTGTTGTCTGTCTTCATACTGAGTAACCAACTGAAAGGGCATTTATAATCTTTTTTTTTAAACAAAACCTTCTGAAAATGAATAATAGATCTTAATTTTAATCTGTACTAGATAGCTGAAAGACTTTATCTCTTGGCCACATTTGACTACTGCTTAAAGTTTGTAAAATTCTCTATATAGTCTCATAATAACGTCATAGTTTCTGGGTTTTTTTTTTTTTTTTTTTAAAGAAAAAGTGCATAGAATGAGCATCTTCAAGAACTCTTGTACATCCCTTTGATCATCTGGCAGGCAATACAGTCCTCGAATTCAGCCTTCCTTTCTGGTTTTATTACTATTAAATAGACAGTTTCATATAAATGGAAACATTTTCCCTCAAAACACTAGTTCAGAACATATTCCTTATATTAAGGATTATGTAACCACATCTTTTGTAAATTCCTTGTTTGTAACTTTCCTGTTGGTATGTAATTTCTTTTCATTTAATTTTATTATCTGCTGGTTTTGGGGCCAATAGATTTGTGAATATTCTCTGGATGTGTCCATGTATAGGTGTATATATATAGATAAATATATATATATATAAATATATTTTCCAGCTAATACCTCAAATGTGTGATTGTTTAATATATACCACACTATATTTGCACAGTGCAGGGCTTCCATTAGCAGTGGATTTTCTTATTTCTAAATTTGAAAATCAGTCCATAGAATTTCATTGGTGCGAGTTCTTTTTATTGATCTTTTCCATATTTTAACAGAGATTCCTACCATAAGGCCCATACTTCAAATATAATTGTATTTTCTATAGCAGTCTGGAAATATGTAAGGGGTAAGAAGTGTTTTTTGCAATGTTTTAGTAAGTTTTCATTAAAAATTGGGATTATTGATTGCGAAACTGTCTGGTAATGCATAACAGATGACATCTGGCATGAATGTGAATGTCTCATTCACTTCAGTACAGGAGTTGGGAGATTCTAATCTGATATTCTACTTTGCCATTTAATAGTACCACTAAAATAATAGATTTTTCAGTGACATTGGAGTATTTTAAGCATCGATTTTAAAATGAATTGTTTTGGATTCTGGATGGATGACTGTATCAGTGAAAAGAAAGAAACTCACACATAAATGGTATTTTTGTAATTTATTTGTATTAAGAAATGCTTCTTACCTTTTTTGTTTTTTTCAGTTTTTGGATTGCTACATAAGACTTTTCTTTCCATATAAAGCTTAGATCATGTGTTTTTTTAAAAAGCTGCAGGTAATTTTCAAGGTGTGATGGAATTTTAATGGAAGCCTTGTATAAGTTAAATGAAGTGAAATTGGTAAAGATCTTATTTGTCTATAGTGCATTCAAAATTATACAGTTAGATTTAAAAATGAAATGTCTGAGTTGTAAAATATTTAATGTTGTATCAGACTTACATAAAATGAAATTTTCTGTGTGAGAACTCTGTTAAAGAAAATACATTTGATTTTTAATGAATGTTCTGCTGAATGATTTATGATGAATTTTTGTCTTTCAGTCTTTGCAGTTTATCTCAATATATGAATAAAAAGGTCTGTTCTCACTGTAAAGGATTTGTTCTTATCATGTTTTATATTCTTACTATGACTTTTCTTTCATTCATTCAACCAACCAACAAACGTATGCATATTTGCTATGACCTGGGAAGTAATGTGGAAATTAATCACTGAACAAGACCAAAATCTTCATGAAGTTTACATCTAGCAAGGGAAATAAATGTCAAGTAAATAACTACTTATGATAAATGCTATAAAGAAAATTACAAG EMBV3_08562 CTTCATTTGCATATGGAAAGGAAGGCTATGATAAGTCATTACCTGAAAAAGGAATTTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01160 TGATTGGTGGAAATGGTATACAGAATGCTGCGGAAATTGGTGGAGGCCATGAGTGCTGCC Gene GeneID:538459|C3H1orf43:NM_001015666:186_cdna Constitutive 2 NULL GeneID:538459 3 GENE C3H1orf43 C1orf43 MGC140006 chromosome 1 open reading frame 43 ortholog EMBV3_20904 AGAGTGTCTTGGAGAACCTTCCGGGCGTGGATCCCAACAATGAGGCCATTCGAAATGCTA Gene GeneID:282016|PSMD4:NM_001013598:19_cdna Constitutive 1 NULL GeneID:282016 3 GENE PSMD4 MGC139713 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 EMBV3_29256 AAAGCTCAGCAGGTCCCGGCGTGCGGCAGTCGGGTCTCCATCTCTGCTCTCCCAAGCGCT Gene BVV0101_070451 - 1 EMBV3_43138 GK000015.2:17375064-17400718 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058391 TCONS_00058387 TCONS_00058389 TCONS_00058390 TCONS_00058384 TCONS_00058392 TCONS_00058388 TCONS_00058385 TCONS_00058382 TCONS_00058383 TCONS_00058386 1 XLOC_036085 Coding TCONS_00058392 XLOC_036085 NonCoding Coding ELMOD1 15:17375438-17415361 j TSS43999 465 1 TCONS_00058392_1 35 6 0.988502580031061 0.00126524496459894 0.000863660570055908 0.000312027158882398 0.000471410329745421 0.000872663198509984 9.4008941486798e-05 5.6071311634817e-05 0.000231573900906029 5.46727560085065e-05 9.23633153941347e-05 2.73578777014067e-05 2.93940846127449e-34 0 0.00012814664625059 2.42052370927561e-44 0.000273645533708091 0.000351821849193485 0 0.000116195001346983 0.00121291472253169 7.2948896416973e-154 2.73055585766791e-165 0 0 0.000106721494202444 0.000653941991795735 0.000116262493892349 0 0 9.14532800568927e-05 NM_001078108.1 ELMOD1 Bos taurus ELMO/CED-12 domain containing 1 (ELMOD1), mRNA. 1e-40 170 97.98 0.210752688172043 NM_018712.3 ELMOD1 Homo sapiens ELMO/CED-12 domain containing 1 (ELMOD1), transcript 4e-14 82.4 79.17 0.195698924731183 0 noncoding 0 1 1 1 0.0152348063214958 0.901352624669185 0.0247675547077792 0.607748438898676 CAGCGCCGGGCGGAGCGCGCAGCCGGAGCGCTTGGGAGAGCAGAGATGGAGACCCGACTGCCGCACGCCGGGACCTGCTGAGCTTTTGCGGCCGCCGAGTTCACGCAGGTAGAATTGAACAGGCGACTGGGGAGCGACGGCTGACAGAGCTATTAAAAGCAAAACAGCAGATTCTTTACCAGATGAGCCATTACTCAGCCACAAAAAGAAACAAAACGGGGCCATTTGTAGTGAGGGTATTGACCACAAGTCCATGGAGAAAGTCTTACGTCATGTATACTTTTGTCTGAACCTGGACATCTAGAAGCTGGACCAAAACTCTTAGGATTCCTTGGAGGTGGCCAGGCAAGTTTACTTTGACAAAGGCAAATTTGGAGACACTTACGACCAGTTTGTATAACATCTGGATAATCAAAATAGTCACAATGAAGCACTTCTTGAGAGTTCTGTTGGAAGAGTGCTGTC EMBV3_01033 CTCAGCGACAGTGAGTCTATGAGAGGTGACTGGGGGCTGCCGAAGAATGGTCTTCTGATG Gene GeneID:100337157|LOC100337157:XM_002700256:5_cdna Constitutive 0 NULL GeneID:100337157 X GENE LOC100337157 NULL hypothetical protein LOC100337157 EMBV3_37392 TTATTTGCTCCCCTCTGGTCCCATACTTTACAGCACTCTGGTGCAGGAAGAAGCAGAAGC Gene GeneID:782414|LOC782414:XM_002694739:117_cdna Constitutive 0 NULL GeneID:782414 18 GENE LOC782414 NULL similar to C-Maf-inducing protein (c-Mip) (Truncated c-Maf inducing protein) (Tc-Mip) EMBV3_00928 AAAAAGAAAGAGCAACGAAGAGGAAGCCCGCCAGCCCAAGAGAGCCAGCCAAGGAAGACG Gene GeneID:100144618|CTCFL:NM_001123365:665_cdna UTR3_Alt 2 NULL GeneID:100144618 13 GENE CTCFL BORIS CCCTC-binding factor (zinc finger protein)-like EMBV3_15606 TGTGCCTACCATCTTCTGTGGCAAGATCAAAGGCCTCTCGGGGGTGTCCACCAAAAACTT Gene GeneID:539414|RAI2:XM_002700371:15_cdna Constitutive 1 NULL GeneID:539414 X GENE RAI2 NULL retinoic acid induced 2 EMBV3_10291 CGTTGGACAACCTTGGGATTACTCGCTGCCTGCTTACAAATTCAGACCTGACCCATCTGT Gene GeneID:520023|LOC520023:XM_002707741:282_cdna Constitutive 0 NULL GeneID:520023 16 GENE LOC520023 NULL similar to PRAME family member 7 EMBV3_05228 TGTGCCTCCAGCACGCTTGTGGTTGTGTCTGTCACTCCATTCCACTTTTCCTTTTGGGGT Gene BVT0102_130873 + 0 NULL GK000008.2:1503656-1507913 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224211 TCONS_00224212 TCONS_00224204 TCONS_00224207 TCONS_00224206 TCONS_00224205 TCONS_00224210 TCONS_00224209 TCONS_00224203 1 XLOC_137474 Coding TCONS_00224204 XLOC_137474 Coding Coding CLCN3 8:1415959-1505085 j TSS168184 5224 1 TCONS_00224204_5 818 13 0.941531556802244 0.00137530828880516 1.18209009155835e-06 0.00114588925654887 0.00129092948388007 0.000752376312066072 0.000501267498676923 0.000301917915782438 0.000855979862791807 0.00101156503563227 1.97637903898951e-22 0.000110305329768251 1.36357450788873e-05 6.58852925828239e-05 9.22668644906808e-11 8.66668565619368e-05 0.0023581597021245 1.22559287141401e-35 0.00613974814888972 0.000526841866473302 0.000147859040759947 3.43747846641677e-05 0.000201629464289822 5.47161956819544e-10 0.000433258171993464 0.00101358478683331 0.000785395653467442 0.000511329839742754 3.09786437975766e-17 7.50908845600027e-05 0.000503695963851965 XM_005209794.1 CLCN3 PREDICTED: Bos taurus chloride channel 3 (CLCN3), transcript 0.0 9418 100.00 0.999425727411945 NM_001829.3 CLCN3 Homo sapiens chloride channel, voltage-sensitive 3 (CLCN3), 0.0 2798 85.06 0.473774885145482 TCONS_00224204_5 sp|P51790|CLCN3_HUMAN CLCN3_HUMAN H(+)/Cl(-) exchange transporter 3; 0.0 1679 98.78 0.998777506112469 2 coding 0 1 1 0 0.426603110093456 0.546952643430632 -0.0459549911948842 0.442135665749114 CCGACGCACCTGTCGGCCCTGCTCTAGCCGCTCCTGTCCGCTTCCCGGGGTCGGTGGGTCGGACTGGACGATTCGGAACCGCAGCGCTTCCTGCGGTACCGTCAGCCTGTGGCCGGAGTTGGGCCGGGTGCCGAGGAGGGGTGCTGGCGGCCGGCCGCTCCAGTTTCTCTCCGAGTTGGAGCATGGCTGCAGCTGTGGTCCCTCCAGAGGGAGATAACCAGACAGCTAAATGGAGTCTGAGCAGCTGTTCCATAGAGGCTACTGTAGAAACAGCTACAACAGTATAACCAGTGTGAGTAGTGATGAGGAGCTTTTAGACGGGGCAGGTGTTATTATGGACTTCCAGACTTCTGAAGATGACAATTTGTTAGATGGTGACACAGCAGTGGGAACTCACTACACAATGACCAACGGGGGCAGCATCAGCAGCTCCACGCACTTGCTGGATCTTCTGGACGAGCCCATCCCCGGGGTTGGCACCTATGATGACTTCCACACCATCGACTGGGTGCGAGAGAAGTGTAAAGACAGAGAAAGGCATCGACGGATCAACAGCAAAAAGAAAGAATCAGCATGGGAGATGACAAAAAGCCTGTACGATGCGTGGTCAGGGTGGCTCGTGGTGACGCTCACAGGGTTGGCATCAGGGGCACTGGCTGGGTTAATAGACATTGCGGCCGACTGGATGACGGACCTAAAGGAAGGTATCTGCCTGAGTGCACTCTGGTACAACCACGAGCAGTGCTGCTGGGGGTCCAATGAAACCACGTTCGAAGAGAGGGACAAGTGTCCACAGTGGAAAACGTGGGCAGAGTTGATCATAGGCCAGGCTGAGGGTCCTGGCTCGTACATCATGAACTACATGATGTACATCTTCTGGGCCTTGAGTTTCGCCTTTCTTGCCGTCTCCCTGGTGAAGGTGTTCGCACCGTACGCCTGTGGCTCTGGGATCCCAGAGATTAAAACTATTTTGAGTGGATTCATCATCCGAGGCTACTTGGGAAAATGGACTTTAATGATTAAAACCGTCACATTAGTACTGGCTGTGGCATCAGGCTTGAGTTTAGGAAAAGAAGGGCCCTTGGTCCATGTTGCCTGTTGCTGTGGAAACATCTTTTCCTACCTCTTTCCGAAGTACAGCACAAATGAAGCTAAAAAAAGAGAGGTGCTGTCGGCTGCCTCCGCTGCAGGCGTCTCTGTGGCTTTCGGCGCACCGATCGGAGGAGTGCTGTTCAGTCTGGAAGAGGTCAGCTATTACTTTCCTCTGAAGACTCTGTGGAGGTCGTTCTTTGCTGCTTTGGTGGCTGCCTTTGTTCTGAGATCCATCAATCCGTTCGGTAACAGCCGCCTGGTCCTCTTCTACGTGGAGTATCACACTCCATGGTACCTGTTTGAACTGTTTCCCTTTATCCTCCTGGGGGTGTTCGGCGGGCTCTGGGGAGCCTTCTTTATCAGGGCCAACATTGCCTGGTGTCGCCGCCGCAAGTCCACCAAGTTCGGGAAGTACCCGGTCCTCGAGGTCATCGTGGTGGCGGCCATCACCGCTGTGGTCGCCTTCCCCAACCCGTACACGCGGCTCAACACCAGCGAGCTGATCAAAGAGTTGTTCACGGACTGCGGGCCTCTGGAGTCCTCCTCCCTGTGCGACTACAGGAATGACATGAACGCCAGCAAGATCGTGGACGACATCCCCGACCGTCCTGCGGGCCTAGGGGTGTACTCCGCCATATGGCAGCTGTGCTTGGCTCTCATATTTAAGATCATAATGACTGTGTTCACTTTTGGTATCAAGGTCCCGTCTGGCCTGTTCATCCCCAGCATGGCCATTGGCGCCATCGCCGGCCGCATCGTGGGCATCGCGGTGGAGCAGCTGGCCTACTATCACCACGACTGGTTCATCTTTAAGGAGTGGTGTGAGGTCGGCGCTGACTGCATCACCCCCGGCCTGTATGCCATGGTCGGTGCGGCTGCATGCCTAGGCGGTGTGACGAGGATGACCGTGTCCCTGGTGGTTATCGTCTTTGAGCTCACGGGAGGCCTGGAGTACATCGTGCCCCTCATGGCTGCCGTGATGACCAGCAAATGGGTGGGCGACGCCTTCGGGAGGGAAGGCATCTATGAAGCCCACATCCGGCTGAATGGGTACCCCTTCCTGGATGCCAAAGAAGAGTTCACCCACACCACCCTGGCTGCCGATGTCATGAGACCTCGGAGGAGCGACCCCCCGCTGGCCGTGCTGACCCAGGACAACATGACGGTGGACGACATAGAGAACATGATCAATGAGACCAGCTACAACGGTTTTCCTGTCATCATGTCCAGGGAGTCGCAGAGACTCGTGGGCTTTGCCCTCAGGAGAGACCTGACCATTGCCATAGAAAGTGCCCGGAAAAAGCAGGAGGGGATTGTGGGCAGCTCGCGTGTGTGCTTTGCGCAGCACACCCCGTCCCTGCCGGCCGAGAGCCCCCGGCCGCTGAAGCTCCGCAGCATCCTGGACATGAGCCCGTTCACGGTGACAGACCACACACCCATGGAGATCGTGGTGGACATCTTCCGGAAGCTGGGCCTGCGGCAGTGCCTCGTCACGCACAACGGACGCCTCCTTGGTATCATCACAAAAAAAGACATCCTCCGTCATATGGCCCAGACGGCAAACCAAGACCCCGCCTCCATCATGTTCAACTGAGCTCCGCGGCGGAGGACGGGGAGGAGGCCGGGGAGGAGGCCTGCCTGCTCAGCAGCAGCTCGCTCTGACCCGGAGGCAGCAGGACCGGCGGCGGCGGGCTGCTGCGGTGGTGCGGGGAGGGGCGGTGGAGGCGGCCGGGCCTCCCCGCCGGCGCCGGCGAGCCGCGTGGGGCCGTCCCAGCCATGCGCTCAGCGCTGGAGGCGGCCCTGACCGGACCCCGTCCTCTCTGGCCCTGCAGAGAGGCCGGCAGGCCCCCTGTCAGAAGGGATCCCTCTGAATTGAGCCATCTCTAAGACTGTAAGGTCTTGCCCTTTTTTTGTTTGTTTTTGTTTTTTAAATCAAAACTGTTGTGTTTAACTCCTGAACTGTACAGGTAAAGCATTACCTTTCTACATTCCGGACGAGCTTCTTCCTCTCCTCTCCCCTCCCCTGCGAGCTGTCACCAAGCCTCTGAGAGTGGTGTGCACGTGGGGAGCAGTCCTTTCTCATATTGAGATGTGCGTGGTCGTACCGGGGTCTCGTCACAGGGAGGGGAGTGGGTGCTGTGTCCCACACGAGGTGCTTGGGGCAAGCCCGGTACCACAACCCGGGCCGAGGCGCCGCGGAAGCTCTGCTGGGGGAGGGGTTCAGCATCCACCACAGGGGACTTGACTGATAAGGATGGACAGTGTTCTTCTTGCTTTTCTCACCCTCTCTGACTTGATGGATAATGTGAACTGGTCTTAACGCAGATTTTTCTGTTTCTAAAACTCCTATAACACAAGTACCATTGAGCGTAAGGAAATGATGCTGCTTTGATAGTGACAAGAAGGAAGTGTTGTGTCGAGCTGCACCTGCTATGAGTTGCATGTTTAAACACTGGAAATTTTCTTTTTCTTGAAATTAGATCAGTCTGTTTGTTTTGTTTTTTTCCCCTTTCCTTAAGGTATTTTACTGCTGACACTGAAGAAGAAATGTAATTCATAACTTGCACTAAATGTATATTTCTTTCTTAAAAATTTACCATTCTTATTTATATTTTTATGGATTAAAATTTATAAAATACAGATCAGTTAATATCACACTTAAATACTTTTACCTTTTTAATGTGATTTTTATAGACTAACTCAGACTTAGAAATATGGAGATATGAACAAAAAAAGTTTACAGTGGGAACGAGGGTCTAAGATGTGGTGTGGTTGTTTCTTTGTGATCACACGTGTATGGAAACCTTTTCTCATCTCTCACTGCCATCCTCTGGGTTGTGTTTCCAGCTTGTCCATTTTGACTCATTAACTGGAAGCTGAAACACTATGTATCGTTTCGCAGATTAAAAGTTAAATAATGTTAACCTTAAACAGAAAAGAAAACAATAGAATGGCAGAGGTAGCAGTTAAAATGTTGATCTGAACAGAACTTGTGAACCTTCGTGGAGGTCACGTCCAGGTGTCCAGTGACATTTTGAATCCATGCTGCACTTTCTTGCACAGTGGGCTGAAAATGTACCGCATGTGTTTGGAATTTGGGGTTTTGGAAAATACCTGTCTTAATCATGGTCTCAGTTCACATCAGCAAAGGCAGTTCACTTGAAGCACTGGCCTGAAAATTCTGGATTATGCATCTTGGGAGGCAAAATGAATTTTTAGAGACAGACATTTTTCTGAAACACATCTTGCAATGAGCTGTTTTTATATTTTGGAAGTGATTGTTCACCTCTTGATTCTTAATAAACCTGTAAGGTCTGGGAGATCACAGAAGATTTTATGATGCTGAGGATTTATAAGATCTCGAAGCCATATGAGAACGACCACTGAGAGGTGAGCAGACGTTAGGAATTCCACGACACCTGAGCTCTGCTCTGCCTGCAGTTAGTGTTGTGTCCTGTTTCCCCCTTCCGGCCACCTCCGCACTTGCTTCCCAGCGTGTGGAGACAGCCCTTCCTGAACCAAGGTCAGCTGGTCTCCTCTCAACCTCTCGTCCGTGCGTTTGCCTGAGGCCCAGTGAGCGTGCGGGCTCCGTGGCCGCACCGCGTCGCACGTGGCGTCACACGTGGTGTGTTTTGTCTCCCTCGTTTCCTTTCCGATTTTGGGTCCTGCTTCACACTGACATCTCGGGCGGATGCCAATTCTCTCCTCAGTGTGTGCCCTTCCTGCTGAGATGCAGGGGGCGGGCTGTGCCTCCAGCACGCTTGTGGTTGTGTCTGTCACTCCATTCCACTTTTCCTTTTGGGGTGTGGGGTGTCTGCGTGTCAGCCCGACGAGGGGAGCTGGAGACCATGCGGTGGAAGTGCCCGGCCCAGTGGAGCGCAGGTGGAGCCTCATTGGAGTGCCTTTTCTGAGAAGGTATGATGAGAATGGGCAGGGTGTCAGCATCTCTTCTCCTTAATAACTGTGTTCAGTTCTGACTCATGAATGCCTAGTTTGTTCATCTGCGATGTTGCCTAGAGCTGTATTTATCTGTTTATTTATACTAGTGTAGTAAAGCTGCATATCATTACAGTACAAATGGTGACTGTGATGAGTCAATCAGAAAACCTATTAAAATCTCTATGACAACGTG EMBV3_21373 ACTGGCCTCTACGGCTTCATCTTTTACCTGCTCGCCTCCATCTTGCTCTCCCTGCTTTTA Gene GeneID:613551|TMEM93:NM_001078035:168_cdna Constitutive 0 NULL GeneID:613551 19 GENE TMEM93 NULL transmembrane protein 93 EMBV3_19106 CGAAGCCTGGCTTGTCCACAAGACAACCCCGTAAACACCTTTGTAAAGAATCTATAACCA Variant GeneID:509834|DGUOK:NM_001014888:5_cdna 739^838 3 EMBV3_22314 GeneID:509834 11 GENE DGUOK MGC137088 deoxyguanosine kinase EMBV3_18462 AACAACTGGCAGCGGTGGCTTGGGTAACAGGTTTCAGCAACTCTCTGGTGCAAACAGTGT Gene GeneID:618070|LOC618070:XM_002697421:135_cdna Constitutive 0 NULL GeneID:618070 23 GENE LOC618070 NULL similar to olfactory receptor 131 EMBV3_10824 GGAAACCAATCTGGTGACCTCAGGGTACAAACAGATCTCTATCAGGCAGGCTCAGAGAAT Gene BVV0101_006859 + 0 NULL GK000013.2:65343890-65366075 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33415 AAATCACAGCCCATTTTGAGGGGCGATGACAGCTTCTTCCTGTGAGTGACTGCCCGTCCT Gene GeneID:282867|SLC2A8:NM_201528:4_cdna Constitutive 0 NULL GeneID:282867 11 GENE SLC2A8 MGC140126 solute carrier family 2 (facilitated glucose transporter), member 8 EMBV3_22367 GTTCATGTACGGTAATCGACCAGCCCATTCCACTAGACAGATTGCTTGTCAGAGGTCTCG Gene GeneID:519417|PLEKHG7:XM_002687213:84_cdna Constitutive 0 NULL GeneID:519417 5 GENE PLEKHG7 NULL pleckstrin homology domain containing, family G (with RhoGef domain) member 7 EMBV3_07937 AATGTATACAGACTCTGGTGGTCGCCTCCCTGTAATTACCAGTACCAGCCGTGGGTTATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03468 TTCAAGTCACCACAGCCACTGATGCAAGCCCACACATTCAGCTGCCCATCTCAAAGGGAT Gene BVT0102_005462 - 1 EMBV3_40025 GK000003.2:575837-580814 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168185 TCONS_00168186 TCONS_00168188 TCONS_00168182 TCONS_00168184 TCONS_00168183 TCONS_00168191 TCONS_00168190 TCONS_00168189 1 XLOC_103014 Coding TCONS_00168185 XLOC_103014 Coding Coding GPR161 3:523921-579317 j TSS126161 5500 1 TCONS_00168185_4 352 0.0478181818181818 6 0.900821373770196 0.000114869533444506 9.96883369060154e-07 0.000330395812715941 8.64987301103961e-05 0.000430345000173251 0.000138914924427468 7.25773479668522e-05 7.98218067537943e-51 8.60558623760933e-60 1.59121499306079e-36 1.74782878209059e-18 0 7.30909883859794e-05 1.61040647459289e-19 0.000209901325030397 8.84448706914495e-31 1.309809004318e-10 3.08223972958983e-12 0.000111187122228856 7.14448159449755e-05 0.000215942396001241 4.15681260760900e-13 8.89097514528529e-37 2.3601646761704e-20 0.000280792496254335 6.554008333031e-05 0.000435026992412834 2.14607457974436e-17 9.26156168070378e-15 0 NM_001077066.1 GPR161 Bos taurus G protein-coupled receptor 161 (GPR161), mRNA. 0.0 3074 99.88 0.310909090909091 NM_153832.2 GPR161 Homo sapiens G protein-coupled receptor 161 (GPR161), transcript 0.0 2111 88.66 0.297090909090909 TCONS_00168185_4 sp|Q2YDN1|GP161_BOVIN GP161_BOVIN G protein-coupled receptor 161; 0.0 733 100.00 0.997159090909091 1 coding 1 1 1 1 -0.0490805763143595 0.762972934503995 -0.00579067190049044 0.915422963173653 ATCTCCGCGCCCCTTGGAGGTAGGGAGTTATCTTCCTCGCGCACGCCGCTTTGCTTCGAGGATCCGGGGCTCTTTGTGGGAAGATCTTGAAGGCGCGCCCCTCTCCTGCGGCCAGCGGCTTCTGAGAGGCCCTTCCCACTAGCCCGCCTGGCTTCTGCCTCGCTGCCGGAAGCCCCTTTCTCAGACCTCCGGAAAGGGAGGACATCGGTGCGGCCCCGTGCCCCCTGGGCCGAGGGGCTTGAAGGTCCCCTCCGGGACAGATGTGCGGGACGCAGCGGCCTCGACCCTTAGCCGAAATCCGTGAGGACCAGTCGTCCAGCATGCTCTGCCCACCCCCTGCTGAGGTACACTGACCATGAGCCTCAACTCCTCCCTCGGCCACAGGAAGGAGCTGAGTAACCTCACCGAGGGGGCCAGTGACCAAGGGGGCAGCGGCGTCACAGAGTTCGTCGCCATCGTCATCATCACCGTTTTTGTCTGCCTGGGCAACCTGGTCATCGTGATCACCTTGTACAGGAAGTCCTATCTCCTTACCCTCAGCAACAAGTTCGTCTTCAGCCTGACCCTGTCCAACTTCCTGCTGTCTGTACTGGTGCTGCCTTTCGTGGTGACCAGCTCCATTCGGAGGGAATGGATCTTCGGTGTGGTCTGGTGCAATTTCTCAGCCCTCCTCTACCTGCTCATCAGCTCAGCCAGCATGCTCACCCTTGGGATCATCGCTGTCGACCGCTACTACGCTGTCCTGTATCCCATGGCGTACCCGATGAAGATCCAGGCAACCGGGCTGTGATGGTGCTTGCTACATCTGGCTCCACTCCCTCATCGGCTGCCTGCCACCTCTGTTTGGCTGGTCATCGGTGGAGTTTGACGAGTTCAAGTGGATGTGTGTGGCCGCGTGGCACCGGGAACCTGGCTATACTGCATTCTGGCAGATCTGGTGTGCCCTGCTCCCCTTCTTGGTCATGCTGGTGTGCTATGGCTTCATCTTCCGAGTGGCCAGGGTCAAAGCGCGCAAGGTGCATTGTGGCGCTGTGGTCACTGTGGAGGTGGGCGTGCAGAGGACTGGGAGGAAGAACTCCAGCACCTCTACCTCCTCCTCGGGCAGCAGGAAGAGCGCCTTTCAGGGCGTGGTCTATTCGGCCAACCAGTGCAAAGCCCTCGTCACCATCCTGGTGGTCATTGGTGCCTTCATGGTCACCTGGGGCCCCTACATGGTTGTCATCACCTCTGAGGCCCTCTGGGGGAAGAACTGTGTCTCCCCAACCCTGGAGACCTGGGCCACTTGGCTGTCCTTTACCAGTGCCATCTGCCACCCTCTGATCTATGGACTCTGGAACAAGACGGTGCGCAAGGAACTCCTGGGCATGTGCTTTGGGGATCGGTATTACCGGGAACCATTTGTACAGCGGCAGAGGACGTCTAGGCTCTTCAGCATTTCCAATAGGATCACAGACCTGGGCCTGTCCCCACACCTCACGGCCCTCATGGCAGGCGAGCAACCCCTGGGGAACAGCAGCAGCACCGGGGACACTGGCTTCAGCTGCTCTCAGGACTCAGGAACAGATGTCATGCTACTTGAAGACTACACATCGGATGACAACCCTCTCCATGGCACGTGCCCACCCAAGAGGAGGAGCTCGGTGACATTTGAAGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAACCCTATTCTTCACGTGAAAGCTGATGTGCACAAGTCCTTGGACAGTTACGCAACCAGCTTGGCCAAAGCCATAGAGGCTGAAGCCAAAATCAACTTATTTGGGGAGGAGGCTTTGCCTGGGGTCTTGCTTACAGCTCGGACTGTCCCTGGAATTGGCTTTGGGAGCCGCCGAGGCAGCAGAACTCTCGCAGGTCAGAGGCTGCAGCTTCAGAGCATCGAAGAGGGGGATGTTTTAGCCACAGAGCAGAGATGAGGGTGGACGCCCGTTACCATCTGTGCCAGGGCCCCGTGAGCAACATCTGATATGCAGTCATCTGAAAAAACACTGAAAACAGTGTCTGTAAGTGACTTCAGTGTCTGTGTGAGACCACACGAGGGCTTTCTGTGGATCCCAGTGATGGGACCAGAGCACAAAACAGAGCAGATGGAGGTGTGGCTGAGACTCTGGGCGGAGTGGGGTTTAGAGGGGGCTAGAGGCCTCAGCTGGGCAGGAAAGCACCATGTGGGCCACCTCCTCTTCTTCACAACCTGTGTCCTTGGGAGTCCAGCCATGCATTCTACCAGAGACCTCGGGACACTTTGGAGGATGGCGCTTCCTCTGTGTGGCTGATGCGGGCTGTGTGGGGCCATTGGTTCTGCCCTGAACAGTCCCCAGAGGAGAGCCCAGGAGCACAGACCCCAGACCCGTGCGTCCTGGTTACAGCCTTGCCTGTGGGTCTGCTGATTCTAGTAGGGACCGTTCCCTGGCTGCTGGGCAGCGGCAGCAGCTCTGGGGCTGTGGCCACTGAGGACAGGCCTCCCTATGGACTGGCTCCTTAGTATTTTAAAAGAAGGGAGAAACCACTGTAAAGCACAGGAGCAAGGAACAGATACCAGACGTTTCATTTCTAGAAAGAAAAACAACCCGTGTGGTTAGGAAGCACCTTCATCTTCCGGACCTGAACAGGGCCGCGGGGCCAAGCACTGCCGAGTAGTTACTGCTATCACTGGAGGGAATCCCCTTCACACAGGAAAATCCCGTGGAATAGGTTCTGTATGTGATGCCTCATGTACTGTTTAGATTAGCTGGCCTCCAGGGAAAACTCCCATGGCCAGCAGCTACTATTTCCCTGCCCTCAATGTCTTAAGAAAGACTTGAAGAACTCTGGACCTGGCGTCAGGAACTGTGTGCCGGCCCGGCTCTGCCTTATGTTACTCGGGTCACTGGGACTCCCTGTCACCTCTGGGCCATCTGGAAAATGAGCTAGGGATTGTGGGGCTGGACTGTGTGTGTGCTTAGTCATCCAGTCGTGTCTGAGTCTTTGTGGTCCCGTGGACTGAGAGGTGGCCAGGGTCCTTTCTAACTCTGATCTTTGGTGTTCTCTGAATTTGTTAGGGGGAAAAAAGTGACCCATGGATCAATAATTGCACAGCTTTTGGGTGTCATGTCTGATGGGCATGTGAAGCACTTCAGGCCTGACGCATGGGCTGATCCAATGTGTCTGTTTAGAGCACAGTCCTGACAGGATGCCAACCAGAAGGACATACAAATGGGTGCAGAGGGCATGTCCTCAGAGGTGGAAAGTGGGGCCACGGATTGTGATGCGTACGTGAGATCTCTCCCCATCCCTTTGAGATGGGCAGCTGAATGTGTGGGCTTGCATCAGTGGCTGTGGTGACTTGAACCACCTGTTCCTGCCCTTCAGCCTAGATGACAGCAGCCAAGTGCAGGTCTTGCCCCACTTCTAAATTCCAGGTGGTCAGCAGAGGATAGATTCTGAGCTCTCCCACATCTGTTATGAGGCAGCCGTTCCAGAAAGTGCACCACCTTTGCAGTGTTTCACTGTAACTAGTTCTCCAGCAGGCAGTGTGCCTTTGCTGTGTGGCAGAGACCAGTGGTTGGCTGGTCCCTTTGTCTGCAGTTTACAAAAGACTTTTCCTTAGATCTGGGGGCTGCTACCTTCACAGTGATCAAATTCACCCAGTCTGCATTCTGGCTGGAAGAGGGAAGCAGCAGAGGGCAGTTTCACCTGTGGGTTCTGCTGAGGTGATGTGCAGATCAGTCAGATTCTGCTCTCACTACTGGCTGGCATTCCTAAATCTGAGGGCATTTTTGCTTTCTGTACTTTTTCCTAGCACTTGTCCTTATCCAGTTTCTAGAGGGACCATACTCTAGTATGCTCTCAGGGGGAACAGGGCAGGAACCTAAGATGACCGCCCCCCCGACCCCATCCACCCCCATCAGGCCATTTTGAGTGCAACGAAGCGGCCTGCATCCCAGGAGTTGGAAAGTGCCTTCCCTGGACTGTACTTGGCTGGGCTCGAAGGAGTGTCCTGAGACCTCCCAAGTCCTCACAGGCTGATCCCAGACTAGCTGGGATATACTAGATTTCATCTAAGCCAATCTAGAAATACTGTACTTCCCAAAAGCATTCTCTGCGTTTCCTCCTTTGTACTGAAGTCCATTCATTCATTCATCTTCCAAGCACTGCACATCTAGCGTGTGCAAGGCATCAAGCTAGGCTCTGTAATAACATTCAAGTGTTTCACTCTAATGTAGGAAGAGACCTAGAGGAGACTGAGGCTAATAAGCAGCAAAGTCAAGCAATGGCTCTAGGAAGAGCTGCAGGCTCTGTAGGGAGCTGAATATTCCCAATTAGAAGGAGTTAGGGGTAGCACGCTATAGGAGGTGACTGAACCAAGACTTGGAGGGTGTCCGGCAGCTAGAACCATATTCTGCATATTGAGGAATTCAAATACTCCTTACTCAGCCTGAGTGAGAAGGGAGCGCAAAAGGAGGTGAGTGGGGAGAGGACAAAGACATACTCCCCGTACACTGAGGTTTGTAGGGGGGGCAGTTTTGGGGACACTTGTCCTTGGTGCACAAAGTCAAAACCCCAACTGCCCTTGCTGAACGCTGGCCCATTAGCTTTATCCCGCTGTGCGGTGGCAACCTGAAGCCTTCCTGAGGGGGCAGTGTGGGGAGCGGTAAGTGGGACATTTGGCCACTTAACATAAAAACCTCAGTTCTGCATCTTCTAGTTTTGACAGGACCACCTGTAGGACTGTTGCCCATCTCTACTGCTTTCATCGAGGTTACCACTTGACTAAGTACCCCCCATGCTGTCTCCCAGATGCCAGGTTTGCGGGCTAGTGTGACCTGGAAGGCACGAAGTCCCACACTACCAAGCACACAGGTCACTGCCGAGGCCTTTCCCAGGCTCCGATTCAGGGCCTTCGACGCCAGGTGGCAGCAGTGTGGCTGTGCACCACCGGCTGTCCCCAGCGGGAAAGAGTCGAGGATACAGCTGAAGGCTTGTTTGCTCCTGGCTTAGAGCACCTCCTCTGAACGCTGGGTCTCCACCGCTGTCCTCAGCCTTTAAGGACCACCCAGCTAGCTTGCTTACACTGCTCAGCTGTGTGATCTTAAACAAATCCCTGCTGTAGGAATGGGGTTGAGGAATGTAAGAGAAGGGCCATCTGGTGTTAATGTTGTTAATGTTATTTGATTCTCATTTAAGGAGCTGCTGTGTAGTCTTTGAGCAACTGGTGAGACTAACTCAAGTATTTGCAATAGGACAAGGAATCCTGGGGTGGACAGGACAGGAGAGGGAGGAAAAAGGCTTTGATACAGTGAGAGATAAGAAAGCTTTCTTAAAAGTGAACAATGCAAAGAAATACTGTGCATCGAACCTGGACTGGCGACTCGTTTCATACATGATATTATACATGTTTCAATGCCATTCTCCCAAATCTCCCCACCCTCTCCCTCTCCCACAGAGTCCATAAGACTGATCTATACATCGGTGTCTCTTTTGCTGTCTCGTACACAGG EMBV3_14241 CATTTCAACCATATTTCTTACGTTTGCGCCAAAGCAGGGAGCACAGGGCGGAATGCATGG Gene BVV0102_090443 - 1 EMBV3_35886 GK000018.2:17085941-17813466 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085644 1 XLOC_051922 Coding TCONS_00085644 XLOC_051922 Coding Coding CBLN1 18:17812582-17816071 = TSS63895 2076 1 TCONS_00085644_2 193 3 0.405676605504587 1.77599184725083e-10 9.68546290658994e-11 9.01071854252499e-11 1.06595728492708e-10 3.77383455187614e-11 2.76212692016738e-11 7.37563262862013e-11 6.51117210222523e-11 8.59800799718261e-06 0.000150590935539975 3.39885497422766e-05 6.55300018547019e-05 0.000282322038337248 0.000970924216164131 0.000261834070758561 0.000846018694075392 0.0041850982651449 3.97853981678752e-10 7.65119421532645e-11 9.35816600401602e-11 2.5578537111751e-11 3.17444597370997e-05 0.00103285532568661 0.000307169081243357 7.4345431290683e-11 6.17137335417791e-11 7.10690007393283e-11 0.000205891450124185 0.000265171600635565 0.000443310601750527 XM_005199995.1 LOC101909193 PREDICTED: Bos taurus cerebellin-1-like (LOC101909193), mRNA. 0.0 3696 100.00 0.986512524084778 NM_004352.3 CBLN1 Homo sapiens cerebellin 1 precursor (CBLN1), mRNA. 0.0 2219 83.90 0.986512524084778 TCONS_00085644_2 sp|P86437|CBLN1_BOVIN CBLN1_BOVIN Cerebellin-1; 2e-142 399 100.00 0.994818652849741 1 coding 0 0 0 0 -0.0544655463258714 0.693108252130717 -0.0127464996524713 0.839855330899048 ATGCTGGGCGTCGTGGAGCTGCTGCTGCTGGGGGCAGCATGGTTGGCGGGCCCGGCCCGCGGGCAGAACGAGACGGAGCCCATCGTGCTAGAAGGCAAGTGCCTGGTGGTTTGCGACTCCAATCCTACGTCCGATCCTACGGGCACAGCTCTGGGCATCTCTGTGCGCTCCGGCAGCGCCAAGGTGGCTTTCTCTGCCATCAGAAGCACCAACCACGAGCCGTCCGAGATGAGTAATCGCACCATGATCATCTACTTCGACCAGGTACTAGTGAACATCGGGAACAACTTTGATTCAGAACGCAGCACTTTCATCGCCCCGCGCAAAGGAATCTACAGTTTTAACTTCCACGTGGTAAAAGTCTACAACAGACAGACCATCCAGGTGAGCCTCATGTTAAACGGGTGGCCGGTGATTTCAGCCTTCGCTGGTGACCAGGACGTGACCCGGGAGGCCGCCAGCAACGGAGTTCTAATCCAGATGGAGAAAGGCGACCGAGCATACCTCAAGCTGGAGCGGGGAAACTTGATGGGGGGCTGGAAGTATTCGACCTTCTCCGGATTCCTCGTATTTCCCCTCTGACTGGCTCATCTCGGGAATGGAGGCAGGGAGAGGGCGAAGGCAGGAGGGGAAAATTATAAAGAGGCTGAACTTTAGAGGACGAGAAAGCGGCACGACTTGAAACTTCCTACTTGTTCCCCAGCTGTATCCGGTAAACGAAGCGCAGCCCGGCGGTTGGACAACTTAGTCCATTTCCTCTTTAGGAGAAGTAAATTCCGCTTAGCTCTGCGCACTCCCATTTCCAAAATAAACTCGCCCCCAACTCCAGTTGCAGTAATCAAGAAAGACAGACTGCCTTGTCACTGTTTCTTACCCCGTGTTCATGTTCCCTACAATTTATATAAAAGAAACTTTGCATTTCACTGTATAATGTGAAATATCTTCCTCCTCTGAGTCCCGCTCTTAATCTTTTCATCCGCTGAAATCTGATATGTCCCTCCCCCCCCCCCCTTTTTTTTTTATTTTGGAGAGGGGGGAAGGATTTTTTTTTTTTTTTTGGATGGGGAAGTAGTTTTAATTTGGCAAGTACTGCTCTTAAAACACCGCTCGAATTAATTAGCTGAAGGTACTTTGTATGTATCCTCGGCTGCTTGTTAGCAGAGAAAGGACTCACCTTAGTGGTGACTGGTTTAAAAAAAGAAATATATATATATATATAAATATATATCATTTGTACACGAAGAACTGTTCCCAGTGGAAACTGGCTGTATTTCCGTATTTCTATGTCCCATTTGGAGTGATCGTGAAATCTAAGGCTGCTTGATGTTCTGATGCTTGTCAATGCCCTAGTGTTCTGTGGCTCCACTAAACGCCAGGAGGTTCTTCGGGACGCTTCCTCGTCCTCTGTAACATACCTGTGAATAGCCAAGATTTAATTTTGCTTTAATCCAATAAAGTTCAAGTGGAACTTTTATTTTTCTGAAACAGCTTTCTAAACTACGCACCTCCCCTAGTTGCGAGGTCTGGGGGCAGGGGTGCGGAAGGGTGAGATTCAGAGGTGTAGGGGACTTGGCGGCGTGCAAGCCGAGAAAGGCTAAGGCAGTGTCGGCCCTCGCTCCTTCCTGCGCGGGCCTAGGGCCAACCATGCATTCCGCCCTGTGCTCCCTGCTTTGGCGCAAACGTAAGAAATATGGTTGAAATGTTGCTAGGCGAGGCCCGACAGCCGGCCTGGAAGCGAAAAAGGCTTTTCGCAGTCCAAGTGCATCAGGAATAATTCCAACTCGAGGAGCCAGAACCTTTCTGCCCTTTCGTCACGCTTCCCACGCCTCTGCCTCCGGACCGTCCGCTCACAGATTCCGAAGCTGCGTCTGTTTTATTCCGCCTCCTCTGAATCCCGAGTCTGCGCCGGCGGTATTACCGGGCGCCGGGGACTTGTGATCGCGCTCATCGCAGGACTTTTATTCAAGAGGTTCGTCCAGGAGTTTTGATTGTATCGGAACATAATGTGAAAGCAAAATTGAAATAAACGACTTCGTTTTAAGTCTGGAAGTCTGACCAAGTCGCTTCGGCAGAGGG EMBV3_00052 AAGCTGATTGTGACCTGCCCGCCCGGAGAAGGCAACGACACTGCAATTAAGTGGGTTTAT Gene GeneID:504406|HYDIN:XM_002694849:775_cdna Constitutive 0 NULL GeneID:504406 18 GENE HYDIN NULL hydrocephalus inducing homolog (mouse) EMBV3_43289 TCCTGCCTTGGAAGCCCAACCCCTTTCCTTCTGTACATACTGTCACTGGCTTGTTGGGAT Gene GeneID:509942|CHRD:XM_002684892:125_cdna Constitutive 0 NULL GeneID:509942 1 GENE CHRD NULL chordin EMBV3_28465 AAATTGTCAAGCAGATGAGCAGACAGTAATCACGCAGCTCAGCAGGCCCTGATCACGTGA Gene BVT0102_014362 + 1 EMBV3_19029 GK000028.2:2633617-2656887 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087816 TCONS_00199376 TCONS_00201912 TCONS_00167102 TCONS_00167105 TCONS_00070446 TCONS_00201908 TCONS_00167109 TCONS_00152623 TCONS_00070448 TCONS_00062708 TCONS_00167104 TCONS_00199377 13 XLOC_052605 XLOC_121029 XLOC_123557 XLOC_101938 XLOC_101941 XLOC_042224 XLOC_123553 XLOC_101945 XLOC_092388 XLOC_042226 XLOC_037435 XLOC_101940 XLOC_121030 NonCoding TCONS_00199376 XLOC_121029 NonCoding NonCoding - 5:53751904-53753184 - TSS148944 1280 0.38203125 1 0 0.000143270592979489 3.55321988919004e-05 7.07907042547704e-05 0.000132983254255838 0.000133104721227159 0.000238325428959753 0.000187716640257667 0.000438550255834119 0.000783711450701534 7.3319997919907e-05 3.71800578440171e-05 1.71290707391799e-05 6.41863918044307e-05 0.000780329570878623 0.000116541449242934 4.79168614942832e-05 2.49682674966479e-05 6.44154264907136e-05 5.60229022993983e-06 5.94275441754921e-05 1.66092586491844e-05 3.31970121017723e-05 2.64844986868152e-05 0.000143956848512895 1.11994897527035e-05 0.00011864329605095 8.31990479997681e-05 7.45044394608617e-06 2.12494326757787e-05 3.07266940757157e-05 XM_866575.4 NEK11 PREDICTED: Bos taurus NIMA-related kinase 11 (NEK11), transcript 2e-43 181 93.33 0.09296875 0 noncoding 1 1 1 1 0.116881084633565 0.451925179500013 -0.751694190943773 0.000131260366214379 AAGAGCGAGATGGTGGTGGGGGACAGCCCCCAGTGAAATCAGAGGTGAGAGCACAAAGCAATACAGTAGGCAGACTCTGGTTTTTTTGTGGTGGAGATGCTCGAGAATATCCGGGTGGACTCCTGAGGCTCGATCCCGCATTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCCAGAGTGGAATGCCTCCCCGGCTCCCGGCACATGATCAGTGCATGCTCAGTCACGATATCAGCGCCTGCTCAGCCACGTGATCACTGACGGCACAGTCACGTGATCAGCGCCTCTCAGTCACGTGATCACCGTATGAGAAACACGTGATCAGTGAACGACCAGCCACGTGATCACTGCATGTGCGGTCAGGTGGTCAGTTCCTGATCAGGCACCTGATCAGTGCGTGCACAGTCCCCTGATCAGCGCCTGTCAGTCACTGATCACTGCCTGATAAACACGTGATCAGTGCATGATGAGCCATGTGATCAGTGCCCGATCAGCCACGTCATCAGTGCATGCGCAGTCACGTGATCAATGCATGATAGCCACGTGATCAGTGCGTGCACAGTCCCATGATCAGCGCCTGTCAGTCACTGATCATTGCCTGATAAACACGTGATCAGTGCATGATGAGCCATGTGATCAGTGCCCGATCAGCCACGTCATCAGTGCATGCAAAGTCACGTCATCAGTGCATGATAGCCACGTGATCAGTGCATGCTCAGTCACGTGATCTGTACTTGATCAGCCACGTGATCAGTGCCTGCAGAGTCACGTGATCAGGGCCTGCTGAGCTGCGTGATTCCTGCCGGCTCATCTGCATGACAATTGCCAGCTGAGCTGCGTGATTGCTGCCTGGTCACGTGCTTGATTATTGCCAGTTGAGCAGCATGATTCGTCACTGCTGAGCTCCATGCTTATTGCCTGCTGATTGCGTGGTTCGTGTCTGCTCAGCTCTTTGAGTATTGCCTCCTGAGGTCCCTGTTCGGTCGCCACCTGCCGGGGACCAGCCCCAACTGATCCAGGGTATTCGAAGGAGAGATGGCCTAGGCGACTATTTATATGCTAATCAGAGATGTCAAGGATACTAGTATGAGGAGAGCTCAGTAGGAAAATTCGGTGGAGAAAAGAGACTGAGTAGCTTGGTTTACGCGGAAGACCAATCAAACTTCAAGACAAGAAGTTTGCAGCACTTACGTAGGCCGCAGGCGCCCTCTCGCATAGCGGAAGGTGCCTCACACTAGACACCTTCTCGAGTGGGTCTTAGCAGCCCAGGCATAA TCONS_00195023 TCONS_00195024 . 3' 234632 TCONS_00195023 TCONS_00195024 . 3' 235911 EMBV3_27795 GGTCCCGTGAGGGAAGGCTGGAAGATTCAGTGTGTATTTTTGGCAGCACAGTAGGGTCTT Gene BVT0102_170462 + 1 EMBV3_06445 GK000024.2:43596477-43639268 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21048 CACGCCGATGGAAGGCCTGACCACATCGAGCCGACTATTTACCCTGGAACCAACCAAGAC Variant GeneID:539526|LOC539526:NM_001076170:11_cdna 486^688 1 EMBV3_13259 GeneID:539526 8 GENE LOC539526 NULL hypothetical LOC539526 EMBV3_10737 TATTGTGGATAGAGCACCTGAAGGCACAACTTTTGGGGATGTCCTGCTACCAGCGAACAC Gene GeneID:100336736|LOC100336736:XM_002698366:147_cdna Constitutive 0 NULL GeneID:100336736 26 GENE LOC100336736 NULL N-acylsphingosine amidohydrolase 2-like EMBV3_02565 GTTTCCAAGTCTTAGTATATTGGGTTTCCCTAGCGGCTCAGTGGTAAGGAATCTGCCTGC Gene BVT0102_068464 + 0 NULL GK000017.2:73527335-73575322 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081904 1 XLOC_050781 NonCoding TCONS_00081904 XLOC_050781 NonCoding NonCoding - 17:73539637-73541812 - TSS61844 2175 4 TCONS_00081904_4 42 0.409655172413793 1 0 0 0 4.25470493226461e-06 0.00010308593680536 4.53992960300374e-06 0 2.97916617210379e-06 1.35970556456758e-06 0.000290211925320742 0.000356273975387385 8.4199931002789e-06 1.6439940415473e-06 0.000447211433678219 0.000980809723218444 0.00080777690599463 3.64297698851263e-05 0 0 4.28606504264385e-05 0 9.30490806583029e-07 0.000344591558375797 0 5.39550659107022e-05 0 0 0 4.41616873632321e-06 3.34800476293642e-05 0.000138212098853606 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 5e-116 423 94.16 0.12551724137931 0 noncoding 0 0 0 0 -0.116466368510227 0.35366053765724 0.0159753568840298 0.769716991324633 GAGAGTGGATTTTATTTTTGAAAAAACATCAAGAGCTAAATTATTGGATGATGAGGTTGGAGGTTTTAACAGAGTGTGATGGTGAAGTCTGGATTGTAGACTGACCATGAATGCAACTCTGACAGAAGAGTTTCAGAGAAGTGATGAGCAAACACAGCGTTTTTCGAATCGGTTTTGGATAGATAAATTCTTGTGTGTTTCAGCTTTGTTATGTTCTACCTCATTTCTGTAGAAAGGATGATACAAGACAGAATTGATAATAGAGACTAGCAAAATGTGAGGAGAAAATTAAAACACAGAGGCCATCCTACCGGCAGAGAGTTTATTAAAATATTTGAAATTCTTTCATTATGTACAACTCGGCGCTGCGTGCTAACAATGTTAAAAAAAAATCTTGTTTCCAAGTCTTAGTATATTGGGTTTCCCTAGCGGCTCAGTGGTAAGGAATCTGCCTGCCAATGCAGGAGACACGGGTTTGATCCCTGATCTGGGAAGATTCCATATACCGCAGAGCAACCGAATCGAGGGCCGCAGCTGCTGAGCCTGTGCCTTAGAGCCCGGGAGCTGCAGCTGCTGAAGCCTGCGCACCCGGGGGCCGGGCTCCACAGCAAGAGAGGCTGCTACCGCGCGAGGCCTGAGCACCACGGCTAGAGAGCAGCCCCTGCTCGCCAACACCGGAGGAAAGCCCTTGCCGCAACAAAGACCCAGTACAGCCAAGAGGAAACAAAATGCTTTTCAAACACATCTTCCTGTGCTAAGGCCTGTCACGTTCTCCAGCCCTGCTTTGTCTTCAACTCAGTGTCGCCGTCAAATGAACCCATCGCCTCTCACTAACGTCCTCCTCTCGGGCTCCCAGGCGTAAAAACGTGTCTGATTCTCTTACATTAATCGTTTCTAGAATTAGAAATCTAGAATGTTCTGTCTTCTGCCTCTTTTCCGGTCTTACTGCATCCACCATCACTGCTTCACTTGCGGGCTTCTGCCTGGGTGACTGTCTTCTCCAGGAGGCTGATTTCCTAATTTCTCCAATTCTGGTGCTTTTGTCTGACAGAGCCTTTTGCTTTAATCTGATACTTTTACTCCCACATCCTTATGTATTTGTTACAGCACCCGACACATGGCTGTGTGAGTGACTGCTTCTGAGATATTCATTGGCGCCCATCTCTGGACACTGAGCTCTCTGAAAGCAGGAGTGATCTTCTTTGCCTTTGACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGGGGAGCCTGGTGGTCCATGGGGTCGCTAAGAGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGGAGGAAACGGCAACCCACTCTAGTGTTTATGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTTTGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGCATAGTGCTCAGGACTTGCACACAGCTCTGTGGCCCCAAGCACATTACTGAAGGGCTCTAGGTCTCACTTTCTTCATCTGCTAAATGAGGGTAGTAGTGTCTGTCAAAGCACCGCTGCATTGAAAGAGTGTGTGTGTGTGTGTGTGTGTGTGAAAAGGTAGCTTCTGTATTATTATATGGAGAAGGCAATGGCACCCCACTCCAGTGCTCTTGCCTGGAAAATCCCACGGACGGAGGAGCCTGGTGGGCTGCAGTCCATGGGGTCGCTGAGGGTCGGACACGACTGAGCGTCTTCACTTTCACTTTTCACTTTCACGCATTGGAGAAGGCAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCTGGGGCGGGGGAGCCTGGTGGGCTGCTGTCTTTGGGGTCGCACAGAGTCGGACGCGACTGAAGCGCCTTAGCAGCAGCAGCAGTATTATTATAGTTTTTGTATATGACAGTTTCTGTATTGTTAGAGCACTCAAAAAAGTTACTACTTTATCTGGTCAGACTCCTACTTCCTTGACCTTCCAGGGCTTCTGTTTTCTGACTCACCTCTTCTCTCCGGGATGGCCTCACTGGTCCCCAGCATCGCCTCCCATTGCCGCTGGCCCAGGCTTCTTTCTGTGGGCAAACACTCTGCCCTTCCCGCCCCGGAGCGCCCGTGCCTTCTGTGGCTCCCTCGCCGACCTCGCC TCONS_00078276 TCONS_00078277 . 5' 12304 TCONS_00078276 TCONS_00078277 . 5' 12304 EMBV3_38577 TGAAGCACCCTAAGAATTTCACCCTATGCAGCAGGTTCTGGAAAGTTGTTCCAAGTGTTG Gene BVT0102_148220 + 0 NULL GK000002.2:63362057-64102655 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00109728 1 XLOC_065632 NonCoding TCONS_00109728 XLOC_065632 NonCoding NonCoding - 2:63939828-63942316 - TSS81349 2488 1 TCONS_00109728_4 113 0.0293408360128617 1 0 0.00174992832451585 0.000113085257078444 0.00060627155720071 0.000460599941950238 0.000877103991337852 0.000140897129581324 0.00044300334091466 0.000917637474852895 0.000621570054441195 0.000112454018491841 0 2.44319213531449e-05 8.64935978818148e-05 1.51253901417412e-05 9.26812582975494e-05 0 0 0 0.00123358526948815 0.000231236120129641 0.000215966677885721 0 0 0 0.000360625074241747 0.000325655274836084 0.000275531518980803 1.15817684918421e-05 3.9024194438105e-06 0 0 noncoding 0 0 0 0 -0.0674117398677555 0.726997080868336 0.010204690761553 0.83259601849824 CAGGAAATACTCTACTGTTTCTGTGAATTCAATATTTTTAGATTCCACATAGAAGTGAGGTCACAAAGTATTTTTCTTTTTCTACTGCATGTTTAAGTTCACGTGTTTCAGTAAGGCTCTCATGACTAGGCAGGGTAGGAAGGACTGAAATGTTTTATGGATGAGGATCCTGAGGCCAGAGTGAGTGAGGCATGTAGTGACACCATGGGCTCAGGCCTGCCCTTCACACCCACAGTTGTGAGAGGAATATGCTGCATTTCACCAGATTCTTAGAACTTCCCTCTTACTGCTTTGAATTGGAAAATATCCCTGGGAACACAGATTAATTATATGCCTTAAGTAACCACCTGGATGTAATTGCTTACTTGCTGTCCTCTTCAGAGAAAAACAAGTGCCCACCCCCATCCCCTAGCTCTTCAGCTTTCTGTGCAATTGATTTGTGCTAATCCTGGAACGAATTTGCAGATTGGAAGCCTTGTCCTCCAGAGTCCAGGATTCCACTTCCAGCCCTGTCACCATCTGGCCAGACTGTATGGAAATGGAGGGGAGGGGGATAACAGCAGGCAGCAGGCCCTTTGCAGGAGTAATAGTGGTGGGCTTTAACTTGCAGAGGGCCAGGGCATCCCTGCCATGTGCACCAGCATACAGGTCAGTGGGGCAGGTCAAAGGAGAGAGTGCAGGAACCTGGGAACAAAAACCTGTCTCTCATGGCCGTTCATTGTTGCCAGTGGAAGCCATCCATCATACTGCTTTTCCAAGCAGCTGGATGCGCCAGAGCTGCCTCCCGCGGGATCTTTTCTTTCTCTTGCCTGTCCCAGGAGCACTTGATGGCTGTCTTTTCAAAGTTATAAGACCCTTATGCACAACGTTTTGAATGGTGTGAGGCCAGTCGCATTTTGGACTCTTTTGAAGTTTTTGCGTTGTGATGGGTAGGGGAATGCAAACCAGGGATCAACTTGGCTGATCCCTCAGAAGTTTTTCACAACAAAATGGGGGGAGCCTTGAAGTCAGGCTTTTGTGCAAAGATCTGTGATGCTTTGGAGTTCCCCCTTGTCATGATCAAGTAGGAAGAGCAAATTGCATGCATCAGGCTGCCTGTTGCTTGCATGAATCAAGTGGTTCTGCCTTTTTTCCTTGACTGATGTGATAATACGAACGCTGGACTCCCAGTGAATCTTTTATTTCGTGTACGCATCACCCAGTCCTTGTTAAAATGTTATTACAGAACTTTTCCCAGAGTAACGAGTGAAATCTGGTTACAATTCAGTTTTGATGGAAACTTGCTGCATGTGTGTTGCAAGGTAACAGATTAGATTTAGTGACTCAATGAGCTTAGATTTAATAGGACTGTAATTGTACAGCAAATTTTAAATGCCCTTTTGATTATTGCATCAGGGTTATATTGAAATACATACTTGTCATTATATCTTGACATTTTAAAAACAATTACATCAAATCTAATGAGAGGGAACCCAGTAAAAAAAACTCAATTACCTCTCAAGGGTGCCAGGTTTTCCATTTCAGCTCTGTGGTTTTCACTGACCTTGGCGTTTTTCTCCCAGTGGTGATAGAAAGATAATAAATTTGGTTGGTATAATTAGTCATTATTCTTATCATAGTGTTTTCTAATAAGCACCCCAAATTATCCAGTATGCATTTTTCTCCTTCAGGCTGCTTCCAACACCCTACATTTGTTTTTGTCTTCAAAAACAAAGGCTGGTGAAGATATACCATGGTTCCTGGGATAAATGTGCACTTTAGTTTAATCCAACAATTTGAGTGCCTGCAACATGCCAGGTTTTAAACAAGATGTAGAGATACAAAAATGAATTCAGACATTATTTTGTTGTCAATAAACTTTCTCTTTTTGTCCTCCTCCTCTTCTTCCTCTTTCATCATCATAGTAGTCTTTGTCCTTCTTGCATCTATTGAAATTTTACCCTAAAGGAGTCACTGTGTTCATTTCTTATCTCATGTCTCATCTTCTAACAACTGCGTGATTAGGTGCCATTATTCCCCTTTGCAGATGAAGAAATCAAGACTTAAGTTAAATACCTTGCAGAGAAGCTGAGTTCAAGGTGAGGTCTGTATGACTGCAGTTTCCACCCTGAGAACCATAAATGAATATTACTTTTCATGTCATTCTGTTGTTCTCAACACTTGGAACAACTTTCCAGAACCTGCTGCATAGGGTGAAATTCTTAGGGTGCTTCATAATGGAGCCTCAGTTACCTTTCTGAGCTCCAGCTCCACTTCTGTTCTCTGTGAGTTAACGTAGTAGGTGGAACCTACTGTACTCAATTTTATCCTTCAGTGTCCTCACCCACTCTCCAGGCCCCTGTGCACATGGCTTCCTTCGTCAGCAGTGCCAGCAATGCCTTTTTATTCCTTTCTCTACCTGTCAAAACCCTTCCTACTCTTCAAGGTGGCTCCAGAAGTGGTCTTTTCAAGGTGGTCTCCCTGAAGCTCCCTCTTATCCTCTAATGAT TCONS_00102552 . 5' 160083 TCONS_00102552 . 5' 160083 EMBV3_15532 TCTCCATTAGTATGAAATGCCAATTCTTTTAAACACGAACTTCCTATATGCGCATAGCTG Gene BVV0102_070956 + 0 NULL GK000012.2:57534615-57767031 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23170 CAGGCCCGCGGGGAGCGCAGCCCGGCCGAGAGACTGATGGAGAGGCAGAGACGGAAGGCG Variant GeneID:534109|ZC3H7B:XM_002687943:19_cdna 194^389 1 EMBV3_33543 GeneID:534109 5 GENE ZC3H7B NULL zinc finger CCCH-type containing 7B EMBV3_37177 CTTTAAGACAAGACGGCGAGTCTCGCGGAGGTTAAAGCATCTACTGCCAATGTAGAACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13531 TCTTGGGGGCCGCAGCCGAAAACTCTCTCCTGGCTATACCTGCTTAACTTCAGTTCCTTT Gene GeneID:617289|LOC617289:NM_001078073:96_cdna UTR3_Alt 1 NULL GeneID:617289 5 GENE LOC617289 NULL hypothetical protein LOC617289 EMBV3_24075 GTCAAAGGCTATGACAACCTCTTTGCCATGATGTGCAACATGCTGGGCCTCGGCGACATG Variant GeneID:504586|ASNA1:NM_001098864:20_cdna 316^615 1 EMBV3_11877 GeneID:504586 7 GENE ASNA1 MGC159838 arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) EMBV3_30037 ACTTCCGGAACGGCCTTGCAGCACTGGATGCCAACATTGCCAGACTCCAGAAGTCCTTAA Gene GeneID:788769|CCDC14:NM_001105469:119_cdna Constitutive 0 NULL GeneID:788769 1 GENE CCDC14 MGC151938 coiled-coil domain containing 14 EMBV3_19617 ACATGTCAGTGCCTGTCCCAGTCCCGACTTTCCCAGTTTTCCATTTTCAGACTGCTCTAG Gene GeneID:529745|SPATA2:XM_002692500:616_cdna UTR3_Alt 1 NULL GeneID:529745 13 GENE SPATA2 NULL spermatogenesis associated 2 EMBV3_16302 ATCAAGGCAGTTATGTTCATCACTCTTCTGCCTTTTACTCCACCATCACCAAACACTCAG Gene GeneID:784070|LOC784070:XM_002696608:105_cdna Constitutive 0 NULL GeneID:784070 21 GENE LOC784070 NULL similar to Hepatoma-derived growth factor-related protein 3 (HRP-3) (Hepatoma-derived growth factor 2) EMBV3_16102 AGTTTCGTGTGGACCGTGAGGGCTCTCCAGTGCTGCTCAACTGCCTTATGTACAAGATGT Gene GeneID:507815|STT3A:NM_001045980:14_cdna Constitutive 0 NULL GeneID:507815 29 GENE STT3A MGC127291 STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) EMBV3_40433 AGTGATCTGGGCTTTCCAACCTGTTGTCCACGTCACAGTTTTTCTGCTCTGGTTGTTTGC Gene GeneID:535054|PELI1:NM_001078004:113_cdna Constitutive 2 NULL GeneID:535054 11 GENE PELI1 MGC142485 pellino homolog 1 (Drosophila) EMBV3_38690 CAGCAAGGACCCCACGGAAAGCCCAGCCAAAAAGCAACCCAAAAATAGAGTAAAATTGGC Gene GeneID:506615|LOC506615:XM_002698034:247_cdna Constitutive 1 NULL GeneID:506615 25 GENE LOC506615 NULL similar to limkain b1 EMBV3_05532 AGGTGGCCGTGGACCAGTTTTAGTGGACAGAGGTGGATTAAGACCCAGCTATCAGGCAAA Gene GeneID:616485|LOC616485:XM_002685306:135_cdna Constitutive 1 NULL GeneID:616485 2 GENE LOC616485 NULL similar to LOC129881 protein EMBV3_00149 ACGCAGGGAAGTGATGGCACGTGGCCCCATCGACCTCCGACCGGTCCCGGACCATCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40930 CGGTTTGCCACTTCCCTCAGCAACTGGGAGACAACATTTCCCCTTTTTCCGGACGGCTCC Variant GeneID:788135|FOXR1:XM_002693081:421_cdna 523^749 2 EMBV3_36804 GeneID:788135 15 GENE FOXR1 NULL forkhead box R1 EMBV3_31579 AAACTCTGGGAAAGATTGCAGCCAGATGGAGTTCTGAGGGTCATGGGGGAAGCTCTGTCT Gene GeneID:100297857|LOC100297857:XM_002687218:102_cdna Constitutive 0 NULL GeneID:100297857 5 GENE LOC100297857 NULL hypothetical protein LOC100297857 EMBV3_23371 TTCAACCTTTGTCTACCTGTTTGGTTCTTCGCATACAGCACAGCATGGTTGTATCGTCCC Gene GeneID:100336095|LOC100336095:XM_002684757:239_cdna Constitutive 0 NULL GeneID:100336095 1 GENE LOC100336095 NULL hypothetical protein LOC100336095 EMBV3_01124 CTTCCTACCCTGAACAGTTAAAAGTCCCCCAAGATGATTCTGATGCAGCCAGTTATCGCC Gene BVT0102_112120 + 0 NULL GK000028.2:16633923-16655887 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159141 TCONS_00159142 TCONS_00159144 TCONS_00159146 TCONS_00159145 TCONS_00159148 TCONS_00159140 TCONS_00159147 TCONS_00159149 1 XLOC_097358 Coding TCONS_00159149 XLOC_097358 NonCoding Coding CDK1 28:16632214-16638102 j TSS119324 4557 3 TCONS_00159149_4 73 0.130129471143296 2 0.226261253609648 0.000901410268812872 6.3341550396945e-10 0.000290523076221183 1.45242004617426e-07 3.65991585871742e-12 2.82769161370537e-07 3.35875708731886e-08 0.000608740821098763 8.24391167847975e-07 0.000727679226022174 9.27705483222937e-08 0.000535112231022105 4.6052796961514e-05 7.31009261849132e-10 0.000287262485030637 0.00547256558833225 0.000530961231529679 0.00276094260663326 0.00138931814312746 1.2972116816742e-08 4.34139409942948e-14 0.00384982446486884 0.000291287193639609 0.00509705414924702 7.08795882265196e-07 6.34037392446947e-05 4.72208250824586e-07 0.00155908924726494 0.000527393360281314 0.00144906329369106 XM_005226297.1 CDK1 PREDICTED: Bos taurus cyclin-dependent kinase 1 (CDK1), transcript 0.0 4320 99.96 0.526442835198596 XM_005270303.1 CDK1 PREDICTED: Homo sapiens cyclin-dependent kinase 1 (CDK1), 0.0 931 81.41 0.215492648672372 0 noncoding ATTGTCTTCTCCTAAATCTTATGAATCTCAGAAAATGTTAATCTATGATCCTGCCAAACGAATTTCTGGCAAAATGGCACTGAATCATCCGTACTTTAATGATTTGGACAGTCAAATTAAGAAGATGTAGCTTTCTGACAGTTTCCCTGTGTTGTGTCAAGAACAGATAATTGTACTTTTACTGTTCATCTCTGGTTTTGTCTTGTATATTTTTCTTTTCTTTGTTGTAAAACTTAATCTGTACTTCATCTTCTGATTTCAAAACTAAGTTAAAATGTAAATACTGTTCTATATGAATTTAAATATAATAATTCTGTATATGTTTGTAGATTCCACTGTAACAGCTGTTTGTTACTATAATAAAACTTTATAAATCTAGTATTGATGTCAGGAATCAGGAAATTTTCGAGTTAGCTTAAACCATCTAAAATGCTACCCCAGTCTTCTTTTCTTATTGAAAATACTAAAATTTAGGAAAGTGCTAAGTTCAAAGTTCATAATGCTTTGAAGTATTTTTATACTCTGTTTAAATTTTCTTGTCAGTTTCTTGTTATGTGGTAACTATACACCCTGCCTAAAGATGAATATTTTTCTACTGGTATTTCAGTTTGTGACCTAAATGTTTAGGCATTCAGAGTGAGAGAACTATCCAGATTTGAGAGACGATGCTTAATTTATAGAGGTTTTTAGTAACTTGTAAAACTAACATTAGTATATGCCAAAGCTTGCTAAGTTTTACAGTCAGAGATCAAGGGCTGTCCACAGCAGGAAAGAACAGTTTAGAAAATTTATGAGGTATCCTATTTTTAGGTAGGTTATGAAAGTTATTTGTCTGAGTGAATTCTTGTGCTTTGGTCAGAGGTAACAACCATACAAAGGAGTTGCTTATCTTGGCTTTCAAGTCTGACTAAACTCTTTGCAAATTTTGACATAGTTTAGTTTATTAGCAGCCTTCTTAGAAGGTTCTAATGTATAATTATTTAGCCAAGATCACTAGCTTTTGGAATTGTTTAATAATGCTGCTCATTGTGATCTTTACCTGCAATTAGCCTAATTTAGATTGTTATAGCCAAAAGAAGTGTCTCTAAAAATAATTTTTATCATTTTTAATGTACAACTATCCACTGGTCACCCATATGCTCTGTTTTTCATGCTGATAGCCCGTGACCAGAATGAGCCTTCTTGTGTGGCTGATCCAGTTGATTGAGTAATGGGTGATCTACCTAATCTTGTTGTCTTCTAATTTTTTCACTTGAGGAGAAAGTATGGGTCACTTTCTTTGGCAACAGGGCATAAGGTGAGAGTTTTGGTGGCCGCCTTCTAGGTTTTTCGGTGGAAGCCAGCCTGCAGTAAGGGAATGCAACTAGAGATGGAAGTCATTTGAGGTCACACTGTTGAGAGATTTCACGGTGGGAATTTGGTAAGTGAAAGGTCAGTCACACAAAAGAGTTAATTGAGATGGTGAAATGGTGAAATGGAGTATCTGCAGATTGTCTATGAAGTATTGAAATGGGTCTACTTTTCAATTGTGCATTACAGACCTTTGGCGGTGTAGAATCAGCATTGATAACTGATGCCGCTACCCCTCTGCCCCCACAAAACTATCAGTGTGTCTTATAAATTATTTCTTGGTCCTTCTGTTTCAATAACATGTAGATGCACTGGTGTCACCAGTGTTTGGGGCCTTGTGGCTTTGGTAGCAGCCAAGCATGCTCATTGCTATTGTTCAGTGCAGTCTAATTGTTTGAAAAGTCAGTAATTCATCAGTTTACAACCTACTTGGTGGACCAGGGAAATGAGATGGAAGAACCCTGCCATCAGTTGCTGTAAACAGACATACGTTTTGTTCTGCTCCAGCTCTCTGTGTAGTCCTAAGTAAAGTGTTTATGTCAGCTTCAGTGACTAGTTGAAAAGCCACTGAATTGGGTCCTCATCGCATGCATATTTTTAAATTGGCTTGTGCTGTGGCGCTTCTGATTGATTTTAAAGTGGATCTTGTCTGTGGGTTAGTAGCTCTTAAATCTGTTTGTGCTAGAAACACCTGAGACTAACTCTCTTCCTACCCTGAACAGTTAAAAGTCCCCCAAGATGATTCTGATGTAGCCAGTTATCGCCAGTTGGTGGTGACTTTAACAACTTTGGGCCAACATCTAGTTTTAGTTGTCTGAAAACTTTGTTATCTTGCATTATCTCTAACTTGTTCTATTTCCATTTTAGGCTGTACAAAGTTCTTTGGTGAGGGGAGAGGTTTGTGTATTTTATCACCAGTAGGAGACTTCCATATACTGTGACTAATGCTGTATCTTATTGTCTGTAGGCTTTAGAGAAGGATTTGTTGTTGTTGTTAAACATAAAATACAAAGGCAGTAATGATGCAAAGAAGTTAATACATAATCTATAATAAAATCATTAATTTATATGTGGACATGGCCTGTGTGAATTAAATGTTTGAAAAAAACCATTTTTTTTTAGTGAATAAAAGGTATTTTGGGGACTTGGATTAACAATGAAATAATTTTTAATTAGTAAAAAAAGGAAACTTGAAAGTTCTTGGTGAAATATACTTCTACATTAGTGCTTCTCGCAAACTGTACTTAATAACAGGTCAACTTCAGCCCCATCCCTGTTTAAATAGTTGCCATATTCCTAGGACCCTAGGATCATTTTGCATTTTGTGGACAGAATAGAGACATTTAGATATGTTTGTGGGCTGTAGAGCTTGAGAGTAGTGGGCATTGTTTGAATAGGTCTGGGGCAAGATGGATAGAGTATTGAATGACTAAAGAGAAGGCAAAGGATGGAGGGATAAAATGTGAAAGTTCCTGAAGAGGGAGAAAATTCTGACTTAATAATGTCTAGGAAACGGCTCAGGTGGGACAGTAATGGTACTGACAAGGATTGTAACTTTTGACCTTTGGAGAAAGGAGTGATGTTAAATATAATTGGAAGCAAGAGTAGACCTTTTCAGTCCCATACTGAATATTTGGATATTTATTTAGTAGTTTGAATATTGAGTTTCTAAGATGCCTTAAAAACTTTAGAAGAAATGTGTTGAGAGTCATAGACTTGTTTGTTGAGAAGGGAAAAAGGTATCACAATACCTGCATTCTTTAGAATACTGAAAAGTCTGATTTTCAAACTTGAATTAGGATCTGGAGAGCTTCTAAGAGATTTCTTGTGCATCCCCAGATTTGGCAGGTCCTGTATAGCCATGAATACAATTTCTTAGCAAGTTCCAGGTGGTGATATGATGGTCCAAGGACCACTTTGAGAATCACTGCATGGGTAGTTCTCAGAAATCTGGAGAACTGAACAGAAACTTAGTCATCTTGTTATGAGAGGAAGCATGGTGCAGAAGGAAAAACTGACCCAGAGTCAGTATACATGTAGAAGTTGAATTGGAATTTAAACCTAAATCTTACATTGTCACTGTTGAGAATTGAGAAAAGTGAACCGCGTAATATAAAGATTGCAGTTTTAGAGCCATGTTAGGGCTTGGTTCCCAGTTTTGCCAATTCCATCTGTGGCTTTGGGTAGGTCACTCAGAGTCTCTGAATCTATTTCCTTAACTGTACAATGGAAATAATAAATGGCATTTATTTATATAAATACATAAGTAGGATTGTAAAATTGTTAGGGATATAGACAGGGCGGCCAGGCATCATGCATACACACAGACATACGCATACAGATATAGTACATGTCTCTTTGTCAGGATCCTCTAATGTTCTCTTCAATACATTGCAAAAATTGGGCAGTAAGCTATTTTTCTGTCACAGTAATCGGTTCTTAAATCTTAACAGATGGCATTTAACAATGGCATTACAAGGTACACTAGATGGGGAATATGGGTTCCTGGTACATGGTAATTCCTTTCTTCTTTGAAGTCTCCCACTTTTTTCTTATGTTACTCTTAGCACTGTTATTTTCTCCCTTACTGAGGGCTGGGGCCATGTCCCGTTCTTTCATCCCCACAGCCCTCAGTCTAGAACCTCAAGTGCTAGACTAATCCCAGGCCTTTAAGCTTGCTCATAGGTTATGGTACCTTCCGTTCAACTATAACTGAACATCTCTGGTGAGCAGCCACTGCTTCACATACACTTCCTGTTTTTCCCAGCAATCTTGTAAGGGAGTGGCCATCTTCATCTTAGAAACTAAGATTCATAGAGCTTAAGTAATTTGCTAAGGATTGCAAGGCTAGTTAAAAGCAGGAGCAAGGACTTGGGAGCTTTCTTTTTTTTTTTCTTTTTTTTTTTAATTTTATTTTATTTTTAAACTTTACATAATTGTATTAGTTTTGCCAAACATCAAAATGAATCCGCCACAGGTATTCATGTGTTCCCCATCCTGAACCCTCCTCCCTCCTCCCTCCCCATACCATCCCTCTGGGTCGTCCCAGTGCACTAGCCCCAAGCATCCAGTATCGTGCATGGAACCTGGACTGGCAACTCGTTTCTTATATGATATTTTACATGTTTCAATGTCATTCTCCCAAATCTTCCCACCCTCTCCCTCTCCCACAGAGTCCATAAGACTGTTCTGTACATCTGTGTCTCT EMBV3_35252 GTGGAGACTGCAGAGGACATGGCCCAGGAGGTCAACCGAACTTTCCAGGAGCTGGCGCTG Variant GeneID:511762|ABCA7:XM_002689145:137_cdna 580^930 1 EMBV3_13072 GeneID:511762 7 GENE ABCA7 NULL ATP-binding cassette, sub-family A (ABC1), member 7 EMBV3_23012 AGTTACTCAAGACCAGCCAGAGATTGCCAGTCAAGTTGGGGAGGTAGTCACACTTAGCTG Gene GeneID:100295645|LOC100295645:XM_002690542:53_cdna Constitutive 0 NULL GeneID:100295645 10 GENE LOC100295645 NULL hypothetical protein LOC100295645 EMBV3_13688 TCAGCTGCCCTCTCTCCCAACTACGATCATGTTCTTCCACTTGGCCTTTGAAGAAGAGTT Variant GeneID:521747|EIF3I:NM_001015628:121_cdna 764^837 1 EMBV3_11338 GeneID:521747 2 GENE EIF3I EIF3S2 eukaryotic translation initiation factor 3, subunit I EMBV3_25339 TGTGCCGCAGTGCCGTCTGGATCTCTTTGTTAATTTTGTTGGTTTCTGCCACACGGTCAG Gene BVT0102_124829 + 0 NULL GK000004.2:103312361-103454360 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185096 TCONS_00185094 TCONS_00185092 TCONS_00185093 TCONS_00185095 TCONS_00185097 1 XLOC_111495 Coding TCONS_00185092 XLOC_111495 Coding Coding KIAA1549 4:103298302-103380306 j TSS137677 9662 1 TCONS_00185092_11 1871 21 0.882431130568394 0.000528672948216214 3.88770917300128e-05 0.000463711526963961 1.70263607774127e-46 0.000281245031247645 1.53374293806229e-05 1.70365595826849e-14 1.0903865888088e-07 5.26465738312578e-53 5.14399319888526e-05 7.49494816142496e-05 4.53622793890555e-224 2.66473409571643e-09 6.84141047671267e-12 1.34830807521113e-14 1.5052392914576e-05 0.000757279728911046 1.53749174722634e-78 0.000270000990193268 0.000560529365945122 0.000223962612512242 2.60571462323764e-71 2.90701613273115e-10 0.000258815936996576 0.000325184822923413 0.000530418189846738 7.44418731302682e-05 9.93302483241095e-05 1.14104231613568e-17 0.000636197138968683 NM_001080267.1 KIAA1549 Bos taurus KIAA1549 ortholog (KIAA1549), mRNA. 0.0 3564 99.95 0.204719519768164 NM_001164665.1 KIAA1549 Homo sapiens KIAA1549 (KIAA1549), transcript variant 2, mRNA. 0.0 6136 79.53 0.727385634444214 TCONS_00185092_11 sp|Q9HCM3|K1549_HUMAN K1549_HUMAN UPF0606 protein KIAA1549; 0.0 2643 75.93 0.998396579369321 0 coding 0 0 0 0 0.0372326662878085 0.823441396266821 0.00295055226825096 0.953628318891759 ATATAGACAGACAACACAACATGCTTAAGTAAAAAGTGGTGCTCAAATTTATGAATGTTTGCTAGTAGTATGCTGACAGTTAACTGGCAAGTTCTGGCTTTCATTTGGTTGTTTTTGAACCGTGGATATTCAATGAGTGGGTATCTGTTGATGGAGAATATTTTCATATCTGAAACAAAATGTTATCAGTGTGACTTTTCATTGCCTTTCAACTGAACTCGGCTGTTATTTTCTTAGATGAGCTCCCTCTGGAACAGCACAATCTTTCTTTCTCCTCCGTGGAGCTCATGCCGAGGGAAAGTGCTGTGCCCAGCACTGCATACGTGGCCTTAACAGAAACCGCTCCAGGGTCCCTGCAAAGCAGTTCTCTCCACGTCACATCATCTCCATCCACCATGACTTTTGATACAGCCTTTTTTAACCAAGGAAAATGGACCCAAAGTACAGCAGATCCCAGCATCTTTGCGGAAAATTATGTGGCAGTGACGAGCAACGAGGTCCTAGATGACGATGAAATGGACAACTTCTTGCCAGAGACTTACTGGACCACCTCCCGTGTGGTTTCTCCGGTACGATACGTCACAGTCAGTCCTCCAGAGCCGCCCAAAGAAACCTTAGAGTCCGTGCTGACTCCATCGTTACCCGTCATACCTTTACAAGATGAAGAAGTGACGTCAGCCTGGCTAAACACAGAGCAACAACCAACCACGCATGCTGAGCTCCCCGGGCATTTCAATGCTTTTCAGTCAGCTTTTCCCACTTCTGAGGGCATAATTCCAATGCCTAGTAGGAATTTGGTGTTTTATCCTTCTGATGCTTGTGGGCACGTGTCAAGCAGGACTTTGCCGGAGATCGTGGCTTCAGGAGCAGAGGGCTCAGGAACCCTCCTTCTTAGCTCGCAGTCTTCCGAGTCCTGGCCACCAGGTGATGATGTTACTCAGCAGCCATCTCCCCCGTCAGGGCAGGTCTCACCGTCTCCAGAGGATGCTCTGGCCACAGATACGGACAGGTACCCTGATGTCACCACTGCTTTGGGTCAGAGTCTAGACAAAACCGTCTCTCCAGGCACCGTCCTGCACCGTCCTGCAGCTCTGTCGCCGATGGTCCTTGCTTTCAGCAGCAGCAGTGCACGTTGGGCTTTGTTTCCAACTCCTCTGGCATCTGGATCCTTTTCTGCTCAATCAGCTGGTGTGTCACATAACCCCTTTCTTCCTGGCGACTCCAGTGAGGCATCAGAATTGTCTGGCCACTCAGTGGTCCCAAGTGGTGTGGGTGACTCTCATGTCTGGAGCCCGGTGTCTTCGTTCAGACCGTACACGTGGTGTGTGTCCTGTGCTGCGGTGTTGTCCCGGCCTGTGCTGTCAACGAGCCTCACGGAGAAGGACACGGGATCGGGCGATGGTGCTGAGACCCTGTCCCCCACCCCCTTGGAAGCCAGCAGCATCTCTCCATTGAGCAGTGTCGTCACGGACTTCTCTGAATTTGAGGAAGATTCTCAAGAATTTAATACACTTTTCCCCTCCAGGCCGATGGTTCCTCTCTCTTCTCCATCCGGGGAAATCTCAGCCACCAGCATCAGTGTTGCAGCCGAGGGGGAGATGAGCAGTGTTGTAACTGCGCAGGTGTACCCTCCCCACGGCCACCCCTCGGTGCCTGTGTCACCTGATGCTGCTCTGGGCTCCGCCTCTGTCGCTCAAGTGATGCCGTCCAGCGTGACAGCCGTGCCATCCTCGGTCACCCCCGGGGTCCTTCTCGACTCTTCTTACCCCATCACAGCAAACAGAAACACACCGTCGCTCGCCGTCAGCGGACCAGGTCTTTTTACATCTTACAGTTTGGACCCGCCGGCAGAGTCTTCACTTTTCCCGGATCGAGAACCTGTCAATTTTTCCCAACTTGAAACTGCAAGTATTTGGGGTTCTGCATCCAGCTTTTTCTCTACTCCACCGCTGGAATACAGCAGCAGCGTCCCTCCATCTTCGGAAGTATTTGCTTCTCCATCTCTGAGGTCAAGGGATCTGTCTACCTTTGTTTCTCAGGCGTTTTCCAGCTTGGTTGAGACACCTACATTGAGTGACGCAATCAATTCTCAGTCACCGCAGCCCTCTGTTCCCGGTTCCACAAACCTGGAGTTTTCTCAGCCCTGGCCAAGCTCAGACTTTCTTTTAAGCACGTTCACTCTTCTCCCTGGTTACTCTGCAATGTCACGACACTCCAGCTTCCCCTCTGATTCCCTGAAGTTTTCTGAAGCGCCCACAGTGTTGCTTACAGACACTGAAGCTCATTTTACCTCAGCTTTCACTGAAACTACCTCCTCTGTTGAGTCTTCACTCACGTCCCGTGAATCTGCAGTCACCACCCTGGTGCCCTCCATCTCCGAGCCCGTTTTGACTGCTGACTCTCACTTCATGTCACTTTGGACTGCTGTTCCTACTTCCCCTGTTCTAACTGAACCTTCTCTCTTTTCAACCCCGGCACCTTCTGGTGATCTCAGTGCTGTAAACGATCACATGTCTGTCTTACCCTCTTTCTCGGAAGTCACCCCTGCCAGCACAGTGCTGGTCACTGCCGGGCACCTGCCGTCAGCATCCTCGTCTGTTTCTGACGTGACCCCCTCGCCTCTGCCTGCAGAGCCTGCAGGTGGTTCGCATGGGCCGTCCTTCACACCCGCGGATCTACCAAGGAACACCTCCACTGAACCAAGCATATCTGATACCAGTGGTGCCCCTGAGAATTCTGGCCACACCACCCTGAACAGCAGAACTGCCAGTCAGGATCTCCACGAGGGCGGCACAGTTCTCCCCGCACTGTCCCTTCATCCTGTGAGCACCCCCACTCCCGAAGCATCAGTTCATACTCCAGCGCTGGTCACCACCAAGTCGCCATACGTGTGTGATATTACAGTTCCTGATGCCTATTTGATCACAACTGTGCTGGCCCGCAGAGCCGTGCAGGAGTATATCATCACATCCATCAAAGAGGTGTTGAGGACCCACTTTAACCGCGTGGTGGAGCTCAAGGTTTATGAGCTATTTGCTGACTTCACTTTTCTGGTAACATCTGGTCCCTTCGTTTACACGGCAATATCTGTCATCAATGTACTTATAAATAGTAAACTTGTACGAGACCAAACTCCTTTAATCTTGGCTGTGAAACCTTCCTTCCTTGTGCCAGAGTCCAGGTTCCAAGTTCAAACAGTACTCCAGTTTGTGCCTCAAAGTGTGGACACCGGCTTCTGCAACTTCACCCAGCGCATCGAGAAAGGCCTGATGATAGCTCTCTCAGAAGTGAGAAAACACCACCAGGGGAGGTATAACCTCACGGTGCAGATCTTGAATATCACTGTGGGATCTTCGAGGCTGGCTCCTCGCCGGGGCCCAGTGAACATCGTCTTTGCTGTCAGAGGCTCGCAGGGGTTTCTGAATGGATCTGAAGTGAGCGAGCTGCTCAGAAACCTGAGCGTGGTGGAGTTCAGTTTCTACCTGGGGTACCCGGTGCTGCAGATCGCTGAACCCTTCCAGTACCCGCAGCTCAACTTATCTCAGCTGTTGAAGTCCTCCTGGGTAAGAACAGTCCTCCTGGGTGTTGTTGAGAAGCAACTCCAGAATGAAGTGTTTCAAGCTGAGATGGAGCGCAAGCTGGCCCAGCTGCTCAGTGAAGTTTCCACCAGAAGGCGGATGTGGAGAAGGGCCACCATCACTGCTGGGAACAACATGGTGCAGGTGGTAAATGTGTCAAGGCTCGAGGGAGATGACAATCCTGTGCAGCTCATCTACTTTGTGGAGGATCAAGATGGAGAGAGACTCAGTGCAGTCAAGTCTTCAGATCTGATTAACAAGATAGACATCCAGAGAGCAGCCATCATCTTGGGTTACCGAATTCAAGGCGCTGTTGCCCAACCTGTGGACAGGGTGAAGAGGCCGTCCCCCGAGGCCCAGAGCAGCAACCTCTGGGTCATCGTGGGCGTGGTCGTGCCGGCGCTGGTGGTGCTGGTGATCGTCATCATCCTGTACTGGAAGCTCTGCCGCACGGACAAGCTGGACTTTCAGCCCGACACCGTGGCCAGCGTTCAGCAGCGTCAGAAGCTGCAGATCCCTAGTGTGAAGGGCTTCGACTTCGCTAAGCAGCACCTGGGTCAGCACAATAAGGACGACATACTGATCATTCACGAGCCAGCACCACTGCCGGGACCTGTGAAGGACCACACCACGCCCTCTGAGAACGGAGATGTGCCAAGCCCCAAGGCAAAGATCCCTTCCAAGAACATCCGTCACAGAGGAAGAGTTTCTCCCTCAGATGCCGACTCCACAGTAAGTGAAGAGTCCAGTGAGAGGGAAGCGGGGGACAAGACTGCAGGAGCTGTGACCGATGGCAAGTCCCACAGAGCCCCACAGAGTGGGCCAGCACCCAGCTCAGGGAACGAGCAGCACTCATCAGCCTCCATCTTCGAGCACGTGGACAGGATCTCCCGCTCCTCGGAGGCCAGTCGGCGGGTCCCCAGTAAGATCCAGCTGATTGCCATGCAGCCCATCCCAGCTCCTCCGGCTCCGCACCCCATCCTGGCTGACCGTGTGGCAGAAACCAACAAAATTAACAAAGAGATCCAGACGGCACTGCGGCACAAATCTGAGATCGAGCACCATCGCAACAAGATCCGGCTGCGCGCCAAGCGCCGCGGGCACTATGAGTTCCCGGTGCTGGACGAGCTGTCATCGGGCGACACGCGGGAGCGGCACCGCGTGTACCGCAGGGCGCAGATGCAGATCGACAAGATCCTGGACCCCACGGCCAGCGTGCCCTCCGTGTTCATCGAGCCCAGGAAGAGCTCCAGGATAAAACGTTCCCCTAAGCCACGCCGGAAACACCAGGTCAACGGCTGCCCCGGAGATGCTGAGAAGGACAGACTTATCACCACAGACAGCGACGGCACGTACAAAAGGCCACCTGGCGTCCACAACTCTGCCTATATTGGTTGCCCGTCTGATCCTGACCTCCCGGCTGATGTGCCCACGCCGTCGTCGGCGGAGCTGGGGAGGTATCCAGGCCTGCCCTTCCCGGCCTCCCAGTACATCCCGCCCCAGCCGTCCATCGAGGAGGCGCGCCAGACCATGCACTCCCTCCTGGACGATGCTTTTGCCCTGGTGGCCCCCAGCAGCCAGCCCCCGAACGCTGCGGCTGCAGGCCCTGGCGTCCCAGCCGGCCTGCCCGTGAACAGCACCCCTTCCCGGGAAGAGAGACGAGCCACCCAGTGGGGGTCCTTCTACAGCCCAGCTCAGACGGCCAACAACCCGTGCAGTAGATATGAAGACTATGGAATGACTCCCCCATCAGGCCCATTACCTAGACCCAGTTTTGGACCCGGTTTGCTGCAGTCTTCGGAGCTGGTGCCTCCCGAGCCCCCACAGCCCCAAGCATCATCTGAAGCCACCTCATTTGCTGCCCGAGGGATCTACTCTGAGGAGGGGCCGTCAGTGGCCCGGCCTCGGCCTGTTGGGGGCACCACAGGCTCTCAGATCCAGCACCTGACGCAGGTGGGAATTGCCAGCAGAATCGGAGCTCAGCCAGTGGAAATCCCACCCAGCAGAGGCGGCCAGTATGGGGGGCCAGGTTGGCCTGCCTATGGGGAGGACGAAGCTGGCCGGAGAGAGGCTACACATGTGCTCGGACATCAGGAGTATTCATCACCACTGTTCCAGGTGCCAAGGACTTCAGGCCGGGAGCCTTCAGCTCCTCCCGGGAACCTCCCTCACAGGGGGCTGCCGGGTGCTGGATTGGCCTACCCCACCAGCTCCACTGAAGACCTCCAGCCCAGCCACTCCTCAGCCTCTCTCATCAAAGCGATCCGCGAGGAGCTCCTCCGGCTCTCGCAGAAGCAGACCGCCGTGCAGAACTTCCACAGCTGATCAGCCTCACCTTGCACATTTGCCAAGTATCTGCTTCCTGTGGAAGCAAGACTAAAAGGAAGTCAACTGAGCAGGTGTTTTTAATAGAAGGAGCATCTCCGGGGCGAGGGGCCCAACTAAGGGAACAGGTTGCAATTTTAGAAAATGCCCCAAGTCACGTGACAGCCCATGATGCTTTTCATATGTTGGCAGTTTTGTGACCACCTAGGTTCAGTTGAAATGTATGTACTTTTGGCCAAAAGCCAGCAGCACTTCACAAAAGACCAACCACAATTCTAAGCTAATGAAATTCCTAAGTTAGTCTCTTTTTTTTTTTTAAGGTGAAAGATGAAAATGTGTAGATGGTGTAGGGATTAAAGGAACCTAGTATTTCCGTGGGAAGATGTGACTCAGACTGGTTTGTACGATGAACCTGCTGCTTTGTTTTCTGAGAAAAGAGTCTTGAAGACATTTTATTAACTGCTTGATTTTCACCCTCTTTTTCCTCCTTAGGAACTTCTTTTAATAGTAATATTAACAACATGAATACTAAGACTGTTTGGGAATTTAAAAAGCTACTAGTGAGAAACCAAATGATAGATTGTAGAGCCTGATGATTCAAAACGAAGCCATCAACTGCATTTTCCTTCTTCTGGTGCTACAGCTCCAAGAGCCCCTTCACCTTGTCTGTGAAATGCAACTTTGGCTTTCTCAATGGAAGAACATGTGGAAGGTTTCATTTTGTTCTAGAAAGAGGAGGGAAAAAGCCTCTCCACATAGGAAAAGCTTAATATTTATTTGGTTATTCAAAGTACATATCAAAGTTTAGATTTACACTCTTTAATTGTATTTGCCATTTGTTGATTGGCAGAGGTAACTGCCTATTGCATTTCATCTGAGTACATATCTTCATCAAGGCCAGTCCTATCGAATGAAGCTTTGAGGAGGCCCCGACGAATCCTGGCACTTTGCTGATACGTTGCTCCCAACTTTGAATGAGGAATCTTACATAAGCAAAAATGCTTTGTCACAGTTCCTAGGACCACCGAATGGTTAGTTATTTGTGAATGCATCTGTGGTAATCGCATTCCCTATGTTCGAGACCTGGAAATGAGTTCTGTTGAGCCTCTTTGTAATGAGCCAAGAAAGGAAAGAGGAGCTTTGAGACCACGAGGGAGAAAGAGTTGCTCCTAATTTCTGATTTCATTGTGTATAACTGTGCTGAGTGACTGTTGAAACCCCCTTTGGGCCTGACGGAGGGGTCCTCTCACTTGAGATTGCCTCCTGAAGGGACTATCTCTCCACCTCCCGAAGTGGAGTGAGGACTAGAGTAACAAGGGCTGTTCTGTTTTCTGGGACCTGAGTGAAATGAAGAAGAAGAGATGCAGATAACACTTTGCCATGAATCCTTTTTTATTAGCTCAATTAATATCTTTAATTAAACAACAGATACACAGGCAGAATCTGGGGCTCTGACTAATCAAAATCTCTGTATCTGTGTCAAATTTTAAGAATCCCGAAGCAGCTAAAATAGTTCCCCAAAGTGTAACCATTGGGCTCCAGTGTTATGTTTCTGCCCTTCCTGCATTAAGCCTGTTATGTCGACTCGTCTCACAATCCAGGGAGAGTCAGTTCTGGGAAATTAAAATGTAGGCATTTTTTATCTTTATGCCTCTGAAACAGGAGAGGTGAGAAGGATGTCTGTTGAGAATATGAAATAAAGTAATGGGAGCTCCTTTTCAGGTACCCTTCCTGGGCTCCACAGAGCAGGGGAGAGAGGACCCTCATATGGGCTTGATCTCTTACCTCTCAGTCTTGATTTAATACCAGACTTGCCCAGAGTGGAGGGGTCTCTTTGCCTGTCATTCAGAAATACCAGGATCCTGAATGTGTAAGGAAGAATTTCAGAGATTCATGCAAATTTTTATTTCGGACACCTTTTGGCAACTTCAGATTGAGGGCCAGCTGATAGCCCCTCCCCTCCCATCCTGCTCAGTATCCTAAGTGTTCACACTTGGAGTGTACAAATGTGGTTACCTCCTTAACACGTGGCAGAAATGGGCCTCTGTTTTAAATGGGACTGCGACAGCAGTTTTGATGCCTTTCAAACTAGCATAACGGGATTCTGTCTCTATTTTTCTTCTTAGAAGGGATATACTTTTAAACCAACGTCAAGACCAAAGATGACATGTAACAGATAAATGGTGGTATGTGGTGGGTGTGAGCAGACCGGTGAGATCCCCAGCACTCTTGCGTTGGTTGTAAAGCACACTCAGTTTGCACTCAGTTTTACCGTCAACTGACCCAGAACATACCAGCTGTCGTGGGAACACCATCCCGAGTGGGGCTTCAGACACTCAGTGAATGGAATCTACTTAAACGAGAGGTCCTCATGACAGTTGTGTGGCTTTGGCGTTCCATTTATTGAAACACTGCAAAATGAAAACTGAAATTTTATGTCTGTTCTTTTTTTCTGATTTTAAAAGTTCTCATGGTAATAGCAAGAGCTATACATTTGAGTCAGAGTTTTAGAGGAGACTGTTTGTTGAAATGATCATTTTCAGATTCTGCACAGTCACTGCCCGGCTGTGTCAGGCCCCTTGTCTGAGCCTCATTCTCCCCATCAGCCACATGAGAACGGGCCTCCCCCGCCCCGGATTTCTCATTGCAAGGATCAGGTGTGGTCATGTGGGCAGACATCCCTTGAGGAGGGAGCACAACGCACTGAGAACGTGGGCTGTCTGTGTGATGGTGCTGGGATGGACCGTCTGATCTGCGGTGACCTCCCAGTGAGTGAGTTCACGGGGAGGAAACCAGAGCAACACCAGAGGCCCCGTGGGACTCCACTTCCTCCCTCCCGATTTGCTTTCAATTCACTTCCTTCACCATTAACTTTCAGTTCTCATGCATTGTTCGGATTTTCTGCTGTTTCTGGCACCAAACACGAGCCCTGCCTTCTGAGATCTTAGGATCTGAATCAGACAACACCCTCTGGTGTAAAAGATGGAAGAGATGGAAAAATAACATGGTTTAAACATCAGTAAAATGCACCGAAGTACACAAGTACATTGGAAGGAGGAATGGAACTTACACGTTTGGAAAACAGTGGGGTCTTGGGGAGAACTCAACATCAGAAGCCACGGAAGACAAGAGCTTCCCAGGCACATGGTGAGATGGTGTGGGAAGAGCTGAGAGTGGGACTGGGGAAGGATGGAGAAAGTGGTGAAGCTGCTGTTGAAAATAACCTTGAACCTGTTCTCCAATACGGAGACCAAATCCCTAACTGCACCATCAAAGGAGTTTTGTAAAGAGGAAGAAGTGAGGGTCTGAGGAAACGTCTGCAAGAACCTAACAAGAAAATGACCAGGCCTGGGAGGAAGGTCTGCGGAGGAGCACGTCTGTCCTGGAGGGGATGGGGGAGTCCCAGAACTGCCAGAGGGCCAGTGTCAAGTGTGAAAGACGTCCGCCGAGGTCTGCTGCTAAGCGCAGATCTCAAGGGCTCTCCACTAATCAAATTGATGCTTCCACTAAGAGCAGATTCATTTTGGAATTAAAAGATTAGGACTATAATCTAGAAAGATAACTGAGAAGATCCTATGCAAACTTAAAGGGTAATAGGATAAACCTGGAGTTGTTTACGAAACTCAAGAAAATAAAAACCCCTTGAAACTGAGAAAAGCAAGAGGAACTGCAAAACACAGAGGAACTCAACAAAGGAATGAAATGTGGAAACCTGCATAGGATTCTGGACAACAAAAAAGTTCATTCAGTCGCTCAGTT EMBV3_26442 AAGAGACAGATCACCTCGTGACAGAGATCGAAAAGATAAGAAGCGGTCCTATGAGAGCGC Gene GeneID:516355|LUC7L2:XM_002687000:6_cdna Constitutive 0 NULL GeneID:516355 4 GENE LUC7L2 NULL LUC7-like 2 (S. cerevisiae) EMBV3_11919 CTCCATCCGCTGCAGACAGGTGTGCTTCCCTGAACACTAGTTGTGCCTCCCATCAGTTAA Gene GeneID:523045|PSD2:XM_002689215:50_cdna UTR3_Alt 2 NULL GeneID:523045 7 GENE PSD2 NULL pleckstrin and Sec7 domain containing 2 EMBV3_03438 CTGGAAAAGTGGGACCACGCAATGATTGTCTTCTGTGGTGCTTAAGGAAACTTACCACAG Gene GeneID:511566|EFEMP1:NM_001081717:83_cdna Constitutive 1 NULL GeneID:511566 11 GENE EFEMP1 MGC148456 EGF-containing fibulin-like extracellular matrix protein 1 EMBV3_03470 AATGGAGAGAGATGCCTTGTTTGTGGGTTATTAGTTCTCCCCAAGTTGGTCTACAGGTTC Gene BVV0102_146193 - 1 EMBV3_28105 GK000021.2:22123882-22128811 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36653 TGACCCACCACCTAGGCACTCCAAAGAAAGAGGTCCAGGTAAAGGACACTTTCGCTTCCA Gene GeneID:280820|HRG:NM_173919:16_cdna Constitutive 0 NULL GeneID:280820 1 GENE HRG NULL histidine-rich glycoprotein EMBV3_31091 GGGAGTTTCTCATGACACCCGGACCTGGAATAGAAACTGTGACCTGTGGTGGAGAAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16358 ACACTCTGGAGGGAACTAACAGTAGAATAACGGAGGCAGAAGATAGGATAAGTGAGGCAG Gene BVV0102_167458 + 1 EMBV3_42590 GK000003.2:66445669-66701406 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089138 TCONS_00161953 TCONS_00238406 TCONS_00219680 TCONS_00037923 5 XLOC_053924 XLOC_098837 XLOC_145073 XLOC_132999 XLOC_021752 Coding TCONS_00219680 XLOC_132999 NonCoding NonCoding - 7:23927258-23928925 - TSS163678 1667 2 TCONS_00219680_1 73 0.997600479904019 1 0 0.000432573933438646 0.000550544628998304 0.000577704761134305 0.000528065937718158 0.00114813690887213 0.000197414097015665 0.000104949801952048 0.000388046551507619 0.000629665071903876 4.68958848802276e-05 1.23591256211162e-05 2.1756248374637e-05 1.26223239930908e-05 0.000750701267147809 0.000122998186196972 0 0 0 0.00017529423333208 0.00033631090838196 0.00040180673176359 2.22575557747623e-06 0 0.000530494254162719 0.00079423150843562 0.000692612149154003 0.000362198085910791 2.88097716616831e-06 1.35901538159244e-05 9.01657114075221e-07 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 7e-88 329 89.37 0.151169766046791 0 noncoding GAATCCAGCCTCTACTCTAGATTTTTAATCCTTGCTTTTTGGTATTTGTTATCAATTTTGTACCTTTAATAACCCAATCTTCAATACCCATTTTTACGTGGGAGCAAGATCACTGGCTTGACTGCTCTCTCCCTCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTCTATCTCTTCCCTCCTCTTTCTCTTCTCTGCCCGACTCTGTGAATCTCTTTGTGTGTTCTGGACTGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCTCTTCTTTTCATTCCCCCCTTTATCCTCCTGACCACTTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCGTGAACATCTCTGAGCAGTCCAGACTGTGGAGAGCACATAAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCTCTTTTGATTCCCCCTCTTCTCCTCCTGGTCACCTATATCTCCCTCCTCCCTCTTCTCTTCTCCATGTAACTCTGTGAACCCCTCTGGGTGTCCCTCACTGTGGAGAAACTTTTCATCTTTAACTTAGATGTTTTATCATTGGTGCTGTATAGATGGAGAAGTCTTGAAGCTACTGTAAGAATATGAATGAAAACCAGAGGCAGGAGGCTAAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATTGATAGGAGCTCATCAAACGCCTCCATACCTACACTGAAACCAAGCACCACCCAAGGGCCAAGTTCCAGAGCAAGACATACCATACAAATTCTCCAGCAACGCAGAAACACAGCCCAGAGCTTCAATATACAGGCTGCCCAAAGTCACACCAAACTCACTGACATCTCATAACTCATTACTGGACACTTCACTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAATACTGACACAAGCTTCCCTAAGCAGGAAACCTTGACAAGCCACCCATCCAGCCTCTCCCACAGTGAGGAAACTCCACAATAAAGAGAACTCCTGGAAAGGCCTCCCCAAACACAGCAATATAAACAAGATGAAAAGGCAGAGGAATACCCAGCAGGTAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTATCTGATAAAGAATTCCAAATAATGATAGTGAAAATTATCCAAAATCTTGAAAACAAAATGGAGTTACAGATAAGTAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGCAAAATAAAAATGAGTTGATATATAATGAATAATGCAATAAATGAGATCAAAAACACTCTGGAGGGAACCAACAGTAGAATAATGGAGGCAGAAGATAGGATAAGTGAGGTAGAAGATACAATGGTAGAAATAAATGAAACAGAGAGTAAAAAAGAAAAACGAATTAAAATAAATGAGGACAACCTCAGAGACTCTCTGAGGCAATGTTAACAATCTCTGGGACAATGTTAAACACCCCAACATTCGAATCATAGGAGTCCTAGAAGAAGAAGACAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAATCACCCAAATCCAAGAAACCCAGAGAGACCCAAACAGGATAAACCCAAGGCGAAACAC TCONS_00212582 TCONS_00212583 TCONS_00212584 TCONS_00212585 TCONS_00212586 . 3' 10109 TCONS_00212582 TCONS_00212583 TCONS_00212584 TCONS_00212585 TCONS_00212586 . 3' 11775 EMBV3_33627 CTGCTGATCCTGAAATTGCCCGACATTTACGCCCTGGAACCCTCCGAGCAATCTTTGGTA Gene GeneID:534611|NME7:NM_001015656:105_cdna Constitutive 2 NULL GeneID:534611 16 GENE NME7 MGC133731 non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) EMBV3_42507 AGGCCAATAAATGGAAAACACCTTCAGATGATGAAGAACTGCCAGCATGCGAATGCTGAA Variant GeneID:505846|UTP18:NM_001098879:62_cdna 660^748 1 EMBV3_14013 GeneID:505846 19 GENE UTP18 MGC159798 UTP18, small subunit (SSU) processome component, homolog (yeast) EMBV3_34658 GCGCGCCTATGTGCTGTCCGGTCACACGTGGACATGTGAGATGAACACAGTTTTAAACTT Gene GeneID:781355|NEK7:XM_002694272:280_cdna Constitutive 0 NULL GeneID:781355 16 GENE NEK7 NULL NIMA (never in mitosis gene a)-related kinase 7 EMBV3_16429 AATGGGCGGCGCAAGTGCAGAGAGTTCAGGGAAGACGGCGCGCCTAAGCCCGCATACTCA Gene BVT0102_198906 + 0 NULL GK000013.2:54546746-54550375 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045581 1 XLOC_026472 Coding TCONS_00045581 XLOC_026472 Coding Coding LOC100336708 13:54545002-54547789 j TSS33230 888 1 TCONS_00045581_3 151 4 0.682699210337401 0.000328045489627814 5.77776224451943e-05 6.31824902219091e-10 4.65229483354833e-05 6.19662355738082e-05 3.08182140268225e-07 3.1812249527698e-09 5.33702340522216e-07 0.000164621752617853 3.77000320122529e-07 4.68721499635353e-11 6.40707065186393e-11 1.02732044232014e-10 0.000136262920310691 5.44974263000464e-11 0.000835935913563973 2.15299050716957e-10 3.78746372887612e-05 3.73200306165942e-19 6.09089264360986e-07 0 0.00033487888745147 7.61250138809708e-07 1.73162251070995e-10 6.99324879155355e-05 0.000270521331048291 4.61745144713157e-05 1.82623347187786e-10 0.000208458667972231 1.02240906392433e-10 XM_005214921.1 LOC100336708 PREDICTED: Bos taurus regulator of telomere elongation helicase 1-like (LOC100336708), transcript variant X4, mRNA. 0.0 1590 100.00 0.990990990990991 XR_244119.1 RTEL1 PREDICTED: Homo sapiens regulator of telomere elongation helicase 1 (RTEL1), transcript variant X4, misc_RNA. 3e-121 439 79.05 0.584459459459459 TCONS_00045581_3 sp|A4K436|RTEL1_BOVIN RTEL1_BOVIN Regulator of telomere elongation helicase 1; 5e-86 275 100.00 0.860927152317881 0 coding 0 0 0 0 -0.0100302184524732 0.928994521130658 0.0159365568632583 0.775006907130727 CGGCCGGAGCACTGCGCAAGGGACTGGGAATGGCGGCGCAAGTGCAGAGAGTTCAGGGAAGACGGCGCGCCTAAGCCCGCATACTCAGACTGGCTGCCGGCTGCGGACACGGTGGTGGATCTCGCGTGGAGAGAGGCTCCTTGTCCCCGCAGTGCAGGCTGGCATCACTTGCCTGAAACCGCTGAGACTCTGAGATGTTCAGAGGAGGTTTTGTCTCGCAGATCCACACAGCCTGCACTTCAGCCAACCTCTGTGACCCCCCAAGAGTAGACCAGTATGCCCAAGATAACCCTGAAAGGTGTGACAGTGGACTTCCCTTTCCAGCCGTACAAATGCCAAGAGGAGTACATGAGCAAGGTTTTGGAGTGTCTGCAGGAGAAAGTGAACGGCATTCTGGAGAGCCCCACAGGCACAGGGAAGACACTGTGCCTTCTCTGCAGCACACTGGCCTGGCGAGAGCACCTCCGAGACGCGGTCTCTGCCCGCAGGATCGCTGAGAGGGCATCAGGGGAGCTCTTCCCCGACCGCACCTTGGCGTCCTGGGGGAACGCCATCCCGGAAGGAGATGTCCCAGCCTGCTACACGGACATTCCGAAGATCATCTATGCTTCCAGGACTCACTCGCAGCTCACGCAGGTCATCAGCGAGCTCCGAAACACTTCCTACCGGTGGGTCGGGGGGTGGTCTGCCAGGACTCCACCCTGGGACACCCTTACTGGGCTAGAACCCTGAGCTCCTTGTGGCCATCAGGATGTCAGCTGTAGGTGTGGGTGGGGCAGCAGAGGTGGGGCTCTGACGTGTGTCGGAGCTCCCGGCACTTCTACAAGAGGGCTGTGTCCCCTTCTTCCAGTGTCCCATGAGAGGAGTGTGGAGGTGGAGGGGCCTTCN EMBV3_04326 TCTGTGTGCTATTCCCTGGCTCTCTCTTCCAACGCCCAGATCTGTGTGGCTAGTTTCAAA Gene GeneID:505120|LOC505120:XM_002694911:998_cdna Constitutive 0 NULL GeneID:505120 18 GENE LOC505120 NULL similar to Transducin-like enhancer of split 2, homolog of Drosophila E(spl) EMBV3_24840 GGAGAGGATCCGGGAGGAGGAGTTGCAGAGATCCATTGATGAGATGAAACGGTTGGAGGA Variant GeneID:524966|STARD7:NM_001102086:71_cdna 142^212 2 EMBV3_35802 GeneID:524966 11 GENE STARD7 MGC140163 StAR-related lipid transfer (START) domain containing 7 EMBV3_30794 AGTACAAGGACAGCGCTTGGATCTTCCTGGATACGGAGAGATTGTTAACATTAATCTGGT Variant GeneID:534630|LOC534630:XM_002699903:154_cdna 383^434 1 EMBV3_27308 GeneID:534630 X GENE LOC534630 NULL similar to RNA binding motif protein, X-linked 2 EMBV3_24945 CATGAGGTTGTCTAAAACGAAGAAACACGACAGCCGAGCCTATGGTGGTTCCATGTGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30330 CCTGAACTCATATATGAGTACGTGAATAACCCCTCCAGCATCTTTATTGTGAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_32737 AATGTGTCAATTACCAGTGGGTGAAGTTTGATGTGTGCAAACCTGGAGACAGCCCCCCAC Gene GeneID:507460|TBRG1:NM_001075315:8_cdna Constitutive 1 NULL GeneID:507460 29 GENE TBRG1 NULL transforming growth factor beta regulator 1 EMBV3_37324 CGCCACAGTACTACACCGTTCAAACACTCGCACCCATGTTTGGAAACATCCCTACCAGAG Gene GeneID:100336992|LOC100336992:XM_002690607:93_cdna Constitutive 0 NULL GeneID:100336992 10 GENE LOC100336992 NULL hypothetical protein LOC100336992 EMBV3_42510 ACTCCTACCTGGCTCGCTTCTGGCTGTTTCTCCAACGCTACGAGGAGTTCATGGTGCAGA Gene GeneID:523867|FADS6:NM_001081722:416_cdna Constitutive 0 NULL GeneID:523867 19 GENE FADS6 MGC151555 fatty acid desaturase domain family, member 6 EMBV3_08394 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12626 CGGACAACTTGAGGAGAAAATGCCACTGTTTATCACACTCTCCAGCAAGCACTTGAACAC Gene BVV0102_419945 - 1 EMBV3_08946 GK000030.2:102926408-103538140 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00152 TACCTTTGGTTTGACCTGCCATATCTACTTCCAGAGGAACCTGTTTCAGGAAGGTGGGGG Gene BVV0102_267757 + 0 NULL GK000021.2:45953663-45974821 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29048 GAGGGAGCGGGATCACCGGCCCGGAGAGAGCTCTCAGGGCCTGAGTGGTGCAGGAGGATG Variant GeneID:538585|AGBL5:NM_001024564:183_cdna 82^198 1 EMBV3_24477 GeneID:538585 11 GENE AGBL5 FLJ21839 ATP/GTP binding protein-like 5 EMBV3_16057 TTCTGTGAAACCAGTCCCTGGTGCCAAAAAGGTTGGGGACTGCTGTTTTAAAGGAAATTG Gene GeneID:494116|ST8SIA6:NM_001103227:70_cdna UTR3_Alt 2 NULL GeneID:494116 13 GENE ST8SIA6 MGC148307 SIAT8F ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 EMBV3_02541 AAACGGCGACAGCGAAGGGAATCCAAGGAGGTTGGCAAATAAACAGGATAAGGAAGGGGC Variant GeneID:512781|ARL13B:XM_002684668:14_cdna 408^657 3 EMBV3_20400 GeneID:512781 1 GENE ARL13B NULL ADP-ribosylation factor-like 13B EMBV3_30149 GCGTGCTCTGTGAGATCAAGGAAAAGACAGGTCTCCAACTGGTTCGGCAACAAAAGAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15851 AGATATAACTGTGATCTGTCCTTGGGAGGCATTCAGCCACTTGGAGTTGCACGAGCTGGC Gene GeneID:281978|PDE6H:NM_174422:5_cdna Constitutive 0 NULL GeneID:281978 5 GENE PDE6H NULL phosphodiesterase 6H, cGMP-specific, cone, gamma EMBV3_22520 CCCCTCTTCTGCTTTCCTGCATCACCAGACAGGGCTTTGCTACAAGTCACAAATAAGCCA Gene GeneID:100139670|IFIT1:XM_002698357:120_cdna Constitutive 0 NULL GeneID:100139670 26 GENE IFIT1 NULL interferon-induced protein with tetratricopeptide repeats 1 EMBV3_17579 GAATTCCAGTGCATCTGAAGGGTAGGATAGCTGATGCCCTCCTGTATAGAGCCACCATGG Gene GeneID:100335752|LOC100335752:XM_002690163:34_cdna Constitutive 0 NULL GeneID:100335752 9 GENE LOC100335752 NULL Cytochrome c oxidase subunit VIIa polypeptide 2 (liver)-like EMBV3_37562 CGAATAGACTATGCATGCGACTGTTGGTCTCATCATTTGTAGGTGGTGTTCTTCATGCCT Gene GeneID:783734|LOC783734:XM_002684684:58_cdna Constitutive 0 NULL GeneID:783734 1 GENE LOC783734 NULL similar to olfactory receptor, family 5, subfamily H, member 2 EMBV3_21916 AGAGACCGGCAGATCACCATCTTCAGACTGGGGGCTGTAATCCCAACTCTTCTTCCAGAT Gene BVT0102_048873 + 0 NULL GK000029.2:41724966-41730279 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165228 TCONS_00165227 TCONS_00165229 1 XLOC_100461 Coding TCONS_00165227 XLOC_100461 Coding Coding HNRNPUL2 29:41728189-41739870 = TSS123467 4888 1 TCONS_00165227_4 749 14 0.582705479452055 0.000177709932672967 4.63830788671267e-05 0.000136364558848499 8.64018093922324e-11 0.000395741944543566 0.000294782635032753 0.000607517660658644 0.00019393526167883 0.000389452191888197 2.10410031576562e-08 0.000123404216506599 8.91813958939988e-14 4.30723565281744e-05 4.66672120030304e-11 0.000283333906689025 0.000361060793769843 1.13335032485929e-05 0.00099044508666946 0.000687655309861423 0.00133281451869859 0.000999730150514626 5.83405630860358e-12 0.000616499009844764 0.000380832050941387 0.000247103340369778 3.22378310151071e-05 0.000438276166822711 0.00047592866609555 2.47100721465425e-08 4.47640437088335e-11 NM_001206245.1 HNRNPUL2 Bos taurus heterogeneous nuclear ribonucleoprotein U-like 2 (HNRNPUL2), mRNA. 0.0 5047 100.00 0.57221767594108 NM_001079559.2 HNRNPUL2 Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 2 (HNRNPUL2), mRNA. 0.0 6006 87.13 0.999795417348609 TCONS_00165227_4 sp|Q1KMD3|HNRL2_HUMAN HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2; 0.0 1248 97.06 0.998664886515354 3 coding 0 0 0 0 0.0560233379226637 0.64255701071164 0.00888930725000411 0.861897809760445 ATGGAGGTGAAGCGGCTGAAAGTGACCGAGCTGCGGTCGGAGCTGCAGCGGCGCGGCTTGGACTCGCGCGGCCTCAAAGTGGATCTGGCGCAGCGGCTGCAGGAGGCGCTGGACGCTGAGATGCTCGAGGACGAGGCCGGCGGTGGCGGGGCCGGGCCCGGCGGGGCCTGCAAGGCGGAGCCTCGGCCTGTGGCCGCGTCGGGCGGCGGCCCGGGTGGGGACGAGGAGGAGGACGAAGAGGAGGAGGAGGAGGACGAGGAGGCGCTGCTTGAGGACGAGGACGAAGAGCCACCCCCTGCCCAGGCCTCGGGCCAGGCCGCGCAGCCGCCGCCGGAGCCCCCAGAGGCGGCAGCCGTGGAGGCCGAGGCGGAGCCCGATGCTTCCGAGAAAGCGGCGGAGGAGGCCACAGCCGAGTCAGGTGGGGTAAACGGTGGCGAAGAGCAGGGCACCGGCAAGGGGGAGGAAGATGAACCGGAGGAGCGGAGCGGGGACGAGACGCCGGGATCCGAGGCGCCGGGTGACAAGGCCGCAGAGGAACAGGGAGATGACCAAGATAGTGAAAAGTCAAAACCAGCAGGCTCAGATGGTGAGCGGCGGGGGGTAAAGAGACAGCGGGATGAGAAGGATGAACATGGCCGAGCTTACTATGAATTCCGAGAGGAGGCCTACCACAGCCGCTCAAAGTCTCCACCACCCCCAGAAGAAGAGGTGAAAGACGAGGAAGAGGATCACACTCTTGTGAACCTGGACACGTATACCTCCGATCTCCATTTTCAAGTCAGCAAAGACCGCTATGGAGGACAGCCACTTTTCTCAGAGAAGTTCCCCACCCTTTGGTCTGGGGCCAGAAGTACTTATGGAGTGACAAAGGGGAAAGTCTGCTTTGAGGCCAAGGTAACCCAGAATCTCCCAATGAAAGAAGGCTGCACAGAGGTTTCTCTCCTTCGAGTTGGATGGTCTGTTGATTTTTCGCATCCACAGCTTGGTGAGGATGAATTCTCTTATGGTTTTGATGGACGAGGACTCAAGGCAGAGAATGGGCAGTTTGAGGAATTTGGCCAGACTTTTGGGGAGAATGATGTCATTGGATGCTTTGCTAATTTTGAGGCCGAAGAAGTAGAACTTTCCTTTTCCAAGAATGGAGAAGACCTCGGTGTGGCATTCCGTATCAGCAAGGAATCCCTAGCAGATCGGGCCCTTCTACCCCATGTCCTCTGCAAAAATTGTGTTGTAGAATTAAATTTTGGTCAGAAGGAGGAGCCCTTCTTCCCACCACCAGAAGAGTTTGTGTTCATTCATGCCGTGCCTGTTGAGGAGCGCGTGCGCACTGCAGTCCCTCCCAAGACCATAGAGGAGTGTGAGGTGATTCTGATGGTGGGACTCCCTGCATCTGGAAAGACCCAGTGGGCACTGAAATATGCAAAAGAAAACCCTGAGAAAAGATACAATGTCCTGGGAGCTGAGACTGTGCTCAATCAAATGAGGATGAAGGGGCTCGAGGAGCCAGAGATGGATCCCAAAAGCCGAGACCTTTTAGTTCAGCAAGCCTCCCAGTGCCTTAGTAAGCTGGTCCAGATTGCTTCCCGGACAAAGAGGAACTTCATTCTTGATCAGTGTAATGTGTACAACTCTGGCCAACGGCGGAAGCTGTTACTGTTTAAGACTTTCTCCCGGAAAGTGGTGGTGGTTGTCCCTAATGAGGAGGACTGGAAGAAGAGGCTGGAGCTGAGGAAGGAAGTGGAGGGAGATGATGTGCCTGAGTCTATAATGCTGGAGATGAAAGCCAACTTCTCTCTGCCTGAAAAATGCGACTATATGGATGAGGTGACATATGGGGAGCTGGAGAAGGAGGAAGCTCAGCCCATTGTCACTAAATACAAGGAGGAGGCAAGGAAGCTGCTGCCCCCCTCTGAGAAGCGGACAAACCGCCGGAACAATCGAAACAAGCGTAACCGGCAGAACCGAAGCCGAGGCCAAGGCTACGTGGGCGGGCAGCGCCGAGGCTACGACAACCGGGCCTACGGGCAGCAGTGCTGGGGGCAGTCTGGAAACAGAGGGGGTTACCGTAACTTCTACGATCGGTACAGGGGAGACTACGATCGATTCTATGGGCGAGATTATGAGTACAACAGATACAGAGACTATTACAGACACCAGTATACCCGGGATTGGCAGAATTACTACTACCACCATCCCCAGGACAGAGACCGATACTACAGGAACTACTACGGTTACCAAGGGTATCGGTGAAGCCCCTGCCATTGTCGCCTGTCAGCCACGAAGCTGAATCTCTGGGGGTGCCAAGCACCCCTCAAAACACAACCAAGGAAAACAGGGGCTGTCGGGGTGGGGCTGAGCTGCCGGGGAGGGGCGGTGGGGGGAGGGTGCGCAAGCAGGGGTGGGGGAGGGGGGAGGTGGAAACAAACAACAAAACTGTACATTTTTTTTAAAGTTTGTTGAAAAGAATATTGTCTTATTCTATAAAACATTTCAAACCTAGTTAGATATTTGTAATCAAAAAAAAAAACATTTGCTCAGAAAGCAGCACTTAGGGCTGCCTGTCCTATATACCCTGCAGTCGGACAGGAAAGAACTGAATATGTCACCCTTCTGATATTCTAAGGCAGCTGGACTGGCAGCTGAGTAAGGGAGAGTGATGGTGAGGTGATGCGGAGAGGGTGGGAAGCGTTCGAGGGTGCCCACTCTCCGCAGCAGGCAGGAGCGGGGCAGAGAGCAAGCTTGTGACTGGGGCAGTGAAAATAAACGATTGGCTCTTATCAATCACTTGCACCAACTAACCGTTTGTATTTTCTTTACCGACCTTTCCCTCTCGGGATATCTGGTCCGGTGGGCTGGGAGGCCATAGTGTCCCTATCTCCACGTGCCTGTGCCTCTGTGCTGTTCGGCCAAGGCCAAGCTACCAATTGGGTGGTTCTATTATATAGGATCCCCAGGCCAGGGAGGCATGGGGACTGTTGGTGACTGGAGAGTAGAATAGTTTGTAGCCTCTCTGTACCCGTTTATGGATTTCCATAAAATCTGGAAGAAGAGTTGGGATTACAGCCCCCAGTCTGAAGATGGTGATCTGCCGGTCTCTGCTCTCTTGTCTTCCAAGGCTGAGACAGGCGGGAAGTCTCTGAAATCATCTCTGTTAGAGAATCTGTCCTCTTCTAGTTCTAGAGAAGGAACGTTTCTCAGGGTTTCAGCTCACACAGAAACGAAGCAGGATTCTTTTCACTGCAGCAGGATATGTATATAGGTGAATCCTGTGGTGTGGGCTACTGGGCCCAGGTGCTGAGAATAGCGACTATTTTATACAGTGTGGAGGGCCAGGGCCGTGCTGGCTTTTTTGATACACAGGTAGAGAGTGACTAGAAAAGGGGAGGGTGGGGGGGGTGGGAGGCAGCTCAGTGGGGCTGCCGGAACTTGGGAAGAGCGTGAATGTGAGCGTGTGCATGCACAGGAGCACCCTTTCCTGACTTGTGGCAACAGGATTCCTCCTGGGGCATCTTCCCTGCGTGGCCCAGAGAGACATCTAGCCAAGAGACTTCAGTTGGGATAGTAACTTTACCGACACCCTCCTAGTTCTTGACAGCTTCAGGTCGCTGGTTCAAGAATATGGGTGGGATGGGGGAATGCTCTTTGGATACTGAGCTTCAGTTTTCATTCACCTTCCTGCTCAGCATTGCATCAGCCAAGAGCTTACTCAGCAAACACCTCACATTGCTGTACTTCCTGGGAGGGGACTCCCAGGTTGTGCTACCAGAAAACACTTCACTTCCACTTCCTTACCTGGGCAGTCCTCTGCTGAAAATTTTGTGCTGAGATTCGATCTCCTTTCCCTCTCCCACGGTTACTGCCGTGCCCAGGAGGGTGCACAGGCTCTGGTTCTGGCCCTCTAATCACCTGTCTAGGACACCCTTCTGCTCCACCAGGACCTCTGACCCAGAGGCTGGAATGGGTGCTGGTAGGCAATATGTTTGCTTGCTCACCGTGACATCCTCTCTTTCTTCGGACACCTGCTGCTTCTGTGGGTTTGTGTGTGGCAGTGGGTGAAGTGATTGCCTGAAGTTTTCTGTAACCCACTTTTTATTACCATTAAGGGGAGTGTTCGAGAAAGCTTTAGTGCTTATAGTGTCAGGGCAAGGAGATAAAAACTGGAGCCCAAAGAGATTCCCCTTAGGGAGGGCAAGATTATAACAGAAAATGGACTCTCTGGCAGAAACTGCCAGCCCTATTCAAATGTTTAGTCCTGCAGCAAATAGCATCTTTTTATAATCTACAGCACGGTGTGGGAATGCTAGGCCCTCAGGGCGGGGAGGGGGAAGGACAGAATTTAAGCCGCTTTGGGTTTTTTTGGGGGGCGGGGGGTACTTGCTGTTCACTTTTGACACTGGAAAGTCATCTTTTCATAAAAAGCTCTTTCTAGGTGGGTGGAGAGTGAAACTGCCACGTCCTTGTCAGTTTAGTCCAAGAGATCACTCGCAACAACAGTAGATGTCTGGGTTTTGTTTGTGTCTGTCTTTTTATTATGGGGAAAAAAAAAAAAAACAATGTTAAGGGGGGAAATGTGGATTAACAGGAGGGATCCCTAGCCTTGTTTTCCTTAGAAGACTTGTTTAGTGTTTTATCAGACGTCTGTTGTAGGTGGAAAAGCTTGTGAGAAAAACAACCACCACATGGAGCCTGTAAATGTTTTTGCACAACCTGTAAAGCATTCTTGGAAGTGGCCAGTAAAAAAAGGGTTTTACCGTTTTAAAAAAATGTAACTGTGTCATTGTTTACATCTGTAACTTTCTCCTCCCCTGTTCTCATTACAACATTCTGGCAAAAATGTAGGCACGGTAGCTACCAGTTTTAGAATAAATAACCATTTGGATTGAATTCA EMBV3_34973 CCTCATACCTACTGTGAGCATATGGGAATTGCTCGTCTAGCCTGTGCTAACATAAGAGTC Gene GeneID:788640|LOC788640:XM_002686958:1_cdna Constitutive 0 NULL GeneID:788640 4 GENE LOC788640 NULL similar to olfactory receptor Olr87 EMBV3_13644 TGGTGGCCTTCTCCTGCTCATTGCCTCACTTCCACTCACTCCTACATACACTTCTGCTGA Gene GeneID:100337506|LOC100337506:XM_002691547:1_cdna Constitutive 0 NULL GeneID:100337506 11 GENE LOC100337506 NULL olfactory receptor, family 1, subfamily F, member 1-like EMBV3_17627 CACAGCCGACAAGGCTCTGAGTCCAGAGCTGCCAGTACCCGTCGAGAACATCAAACAGGA Gene GeneID:513297|L3MBTL2:NM_001075610:168_cdna Constitutive 0 NULL GeneID:513297 5 GENE L3MBTL2 MGC139186 l(3)mbt-like 2 (Drosophila) EMBV3_17089 GGCCTGGATGGCAAGACTTTCTTTGCCCCTCTCCACCAACTACCGTGACAACGTGTTCTC Gene GeneID:540115|PCDH12:NM_001098111:26_cdna Constitutive 0 NULL GeneID:540115 7 GENE PCDH12 MGC149025 protocadherin 12 EMBV3_19536 GAGTCGAGTCAGCGTCACCGTCGAACCTAAGTGGATGTGTGGGGCGCGCAGGCCGGGCTG Variant GeneID:509858|LOC509858:XM_002690497:458_cdna 149^414 1 EMBV3_11626 GeneID:509858 10 GENE LOC509858 NULL similar to UPF0172 protein C14orf122 EMBV3_16784 GCCGGCTTCTCCCTCTTCTTCTACCCCGCGGCCCCAGAGAGCCCCCGGCTCACAGCGTGG Variant GeneID:513317|TMEM175:NM_001075613:7_cdna 909^987 1 EMBV3_02132 GeneID:513317 6 GENE TMEM175 MGC128440 transmembrane protein 175 EMBV3_26117 CTCAGCTCCTACTTGGAGAAGAAAAGCGAGGCCGTTAATGAAGGAGAAGTTGAGCCAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41371 GGCTTAGGTAGGGCTGTAATAAAGTGGTGGAGCCTGCTTCTGCTCAGGGTTTCCATCCTT Gene GeneID:533725|CGN:XM_002686041:239_cdna UTR3_Alt 2 NULL GeneID:533725 3 GENE CGN NULL cingulin EMBV3_14257 GTGTATTCCTTCCTCTACAAGATAGTGGAGGTACATCACGCAGCAGGGCAACAAGCTGGA Variant GeneID:515766|AP1M2:NM_001034511:41_cdna 287^417 1 EMBV3_24668 GeneID:515766 7 GENE AP1M2 MGC127475 adaptor-related protein complex 1, mu 2 subunit EMBV3_36754 CTTGCTTCATGATGGCTTCTCCTGTAATCTCAGAGCACTTCTAGATAGCTCAGTTCACTG Gene BVT0102_302602 + 0 NULL GK000021.2:32949011-33083548 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123706 1 XLOC_075258 NonCoding TCONS_00123706 XLOC_075258 NonCoding NonCoding - 21:33080551-33082351 - TSS92465 1800 2 TCONS_00123706_3 68 1 0 0 0 0 4.6134118472081e-06 0.000148115440337166 1.98725246883144e-06 0 0 8.32846888745155e-05 3.42874112062853e-05 2.5435376738075e-06 0 1.594044056178e-06 0.000107146292682403 0.00052060202431269 1.46731122164333e-05 0 0 0 0 0 4.12259855710978e-06 0 0 0 0 0 1.06724150409722e-05 0 0 0 noncoding 0 0 0 0 CTGCTAGATGTTGAAAAACATGTATGCAAATAAGCAAATAAAAGTTTTTAAGCTCTCAGACTTAAATATTTACATTATCATAAATGTACAAAGATAAATGTTTATATGAGAACACATATAACACATTCCAGGAACATATTTTTAAACATGATTGTCAGGAACAGTTATGAAGTGGCATTATTTCTTTATGGGCCTCGTGGTAAACTCTTAAAAATAAATTTTGACTGAATGTTAATGGGGTACAAAAATTATGGAGGAGGTTTCTCTGTACTATCACTGGGTAAAATGAATAGTCACAGTAACATAATAGTTCAAAGCAATCTTATCTTTTCCTTTCACCAAAATACTTTTCTTCTCATCCTGGAGCACAGCCAAACATAAAGGTCAAACCCTAAATGGAGGGTCAGAGGTGAAGAAGAGAACTACATATCAAAAAGGCTTATAGAAGATACTTTGACATTTTCCCCACATTAATATAGTCATGTTAGAGTCTCCAAAAATAAAGACATGATAAAATATTTCCCCCTCTTCCCTTCTGACAGTTATGGAAAGATGTTTGTTTTTTCACATAGTTTGCGAGTTGGTCATAGCCAAAACACATAGTAATCGTATGAATTCTGCTTCCATTGTTAACTGTTCATCTCTGGGCAGAGGCTACAACTCCCATTCTGAAGCCAAGAAAATGTACCATACATGCCATTATAGTTTACTAAACGAGTCACCAAAGAGAAGCAGGCACTTCAGAAAGTAATTAAGGTAGTCAGTGAACTGAGCTATCTAGAAGTGCTCTGAGATTACAGGAGAAGCCATCATGAAGCAAGTATTCAAGATTGCTCACAGAAAGTTTTACCCCTGTGGGTAATTCATGGTTTTCACTTCTACACTGCAGAGAGCAATATGGGTTCTCCGACTATACACATTACCACATCATTCCATTTATCAAGGAAAAAAGAAAAAAAAAGACGTTGTGGCTGAATAAAAGTCAAGAGGTAGGCCCCAACACAGAATCCTCAAGGCAATCCCAATTCAGGTGAAAAGCTGATGACAACACCATACAATGACCCAAAATCAGACTTTCATATATAATCTTACCATATTTAACAGACACAGAGAAAAATGTATTGAGTTTTCTATAACAAGGCCAACAGAAATGAAATCATAGTTTTCCTTTAGCTCCTTTCCTATCCCCTCAACGCCAGCCTTCCAGTAACTCCATTCCATAGCTCTCCGATTCCTAAACGAGGATCTTAAAAACACAGCGGACTGCAAAAAAGTAACATTTAATGGTGGGAGGGCTCCTCTTTCCTGTTGCTCTCAGCAGTCTTTCATGTAGTCAAAGGGCGAAAAAAAAAAAAGAAAGAAATCAAGCTCTCAGACGGATGGTGCAGGCGATTGGGAGAGGGTAGAAAAGGGGCTCAGACGGCAAGTCCTCATCGTGGGGGGAAAGAAAAGTTACAAGAATGAACGAATCAAAGGGCAAAGGAGATACAAGACTGACCTCACGAACCACTCAAAACCCCCAAATAACCAAGCAAACCCGCACGTTAGGGGGGCTCACAAACCGCAGAGCGAAGTGAGCAGGCAAAGAGCCACCGGGTTTCGCCCTGGCGCTGTTGGCCAGGCTGCGCCGGATCCTCGGGTTTGGAGGTGGATGGGGATGTCCCTGCAGACTTCGCAGGAACGAGAGGCGTCCTTCCTGCCCTAGCCTCACCGCGTACACCTCCTCCAGGCTTCACTTTCCCCAGCAGCCTTCCAGCTGCGCTCGGGGGCGTCCCCCGCCGCCAGGTCCCAACTTTCCCT TCONS_00121029 TCONS_00121030 . 3' 322 TCONS_00121029 TCONS_00121030 . 3' 2121 EMBV3_18571 CCACCGTCCTGGAGGCCGAGACCCGCAAGCTGGATGAGTCCCTGACTCAAAGCCTGACAT Gene GeneID:507479|CEP250:XM_002692450:475_cdna Constitutive 0 NULL GeneID:507479 13 GENE CEP250 NULL centrosomal protein 250kDa EMBV3_01308 GGGAGGGTGGTTAGTATTTCTCTTCTTTCCAAAATAACCTGATCATCTTAATTCGGGGTG Gene GeneID:506441|DCTN5:NM_001024484:329_cdna Constitutive 3 NULL GeneID:506441 25 GENE DCTN5 MGC3248 dynactin 5 (p25) EMBV3_22644 CATAGTGAAGCAATTGAGGCTTCAGGAGTGTCCATGGCCCTAATCATCTTGTTCATGTGG Gene BVV0102_095606 - 1 EMBV3_10327 GK000001.2:129041631-129089262 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00253103 TCONS_00118040 TCONS_00210913 TCONS_00174805 TCONS_00171428 TCONS_00174806 TCONS_00250277 TCONS_00232824 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00250276 TCONS_00238380 TCONS_00174807 TCONS_00232829 11 XLOC_151107 XLOC_156044 XLOC_072206 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_153220 XLOC_142307 XLOC_153219 XLOC_145047 XLOC_142312 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_05450 GAAGGATATTGGTTACCAGGCGACGAAATTGGCCTGGATTCCTTCTGAGAACATCCAGGA Variant GeneID:506325|ZMYND11:NM_001045940:23_cdna 289^800 3 EMBV3_35156 GeneID:506325 13 GENE ZMYND11 MGC137432 zinc finger, MYND domain containing 11 EMBV3_11509 CAGGTAACCGGACACCTGTTCTTGAACATACTAGCAGTGCTGTGAAGCAGGTATGTTCAC Gene BVT0102_256918 + 0 NULL GK000003.2:54220014-54253046 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32268 ACCAGAGTGGATTTCATATAAAGTGCGCAGCCTGGAATTGTGTCGCCGTTTAAACGAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21042 CTTTGTTGACCCCCCTCCTCCAGAAGATGCCTGAACTAGCAGACTCGGGTGCAGAGAAGA Gene GeneID:515836|CCDC17:XM_002686422:386_cdna Constitutive 0 NULL GeneID:515836 3 GENE CCDC17 NULL coiled-coil domain containing 17 EMBV3_28277 CCCTGCAGGCCTGCGGAGTGCGCTTCACTAGGCTGGCTGTGCCCCCCTCCCCATTTCTTA Variant GeneID:538763|YDJC:NM_001102221:91_cdna 516^687 1 EMBV3_11307 GeneID:538763 17 GENE YDJC MGC159810 YdjC homolog (bacterial) EMBV3_24669 GAGGCTCCACAAACATCTAAGAGACTTAAGTTCCAAGTAAGATAAACAGGGCCACCAGAG Gene BVV0102_269174 + 0 NULL GK000021.2:69647506-69668360 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11460 CTTTGCAACCTGTTCTTCCCACTTGGCTGTCGTGGGGCTCTTCTATGGCACTAGCATGTT Gene GeneID:614090|LOC614090:XM_002689089:14_cdna Constitutive 0 NULL GeneID:614090 7 GENE LOC614090 NULL similar to olfactory receptor Olr1455 EMBV3_09220 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37546 CTTCTGCCAGCGTTGCTTGGTTCTCCCTCTGGGGTTAGTGATCTGTCTCTTTGTTCTCAT Gene BVV0102_046755 + 0 NULL GK000006.2:38608842-38614369 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203030 TCONS_00203035 TCONS_00204978 TCONS_00203032 TCONS_00203034 TCONS_00203033 2 XLOC_124084 XLOC_124560 Coding TCONS_00203034 XLOC_124084 Coding Coding MED28 6:38605458-38613903 j TSS152185 5684 6 TCONS_00203034_2 61 0.240499648135116 4 0.327333017527238 2.36599398860665e-07 5.76154311514338e-08 3.35536876182743e-07 4.22767885882402e-10 0.000309899569498172 7.96510944206758e-07 4.47136052463604e-06 2.17907839496451e-08 2.24229209074476e-05 0.000390189093500301 0.000281102735415383 8.47509528890331e-05 0.000401959694638334 1.32939847387486e-07 1.09861385442214e-09 0.00366197553200272 0.00340728636114999 0.00458210496364936 5.73634030475828e-07 3.29219422779238e-05 5.45093232753923e-13 0.00373287878055378 0.00222008698651038 0.00498357847773375 0.0010373868829906 9.25142404682367e-10 0.000457934818769904 0.000150926792771101 0.0004585599594895 0.00106759306645902 XM_002688146.3 FAM184B PREDICTED: Bos taurus family with sequence similarity 184, member B (FAM184B), transcript variant X1, mRNA. 0.0 5476 100.00 0.533954961294863 NM_025205.3 MED28 Homo sapiens mediator complex subunit 28 (MED28), mRNA. 0.0 731 77.99 0.167663617171006 0 coding 0 0 0 0 -0.0726428028104845 0.664740728832422 0.00468371298534909 0.921413410698338 GTCCGTGCTTTCCTGAGGCTTGCTTTGCTTCTCTGGTGAGTCAAGATTATGTCAATGGTACAGATCAGGAAGAAATTCGAACTGGTGTTGACCAGTGTATCCAGAAATTCCTGGATATTGCAAGACAGACAGAATGTTTTTTCCTACAAAAAAGATTGCAGTTATCTGTCCAGAAACCAGAGCAAGTTATCAAAGAGGATGTCTCAGAACTAAGGAATGAATTACAGCGAAAGGATGCTCTGGTCCAGAAGCACTTGACAAAACTAAGACATTGGCAGCAGGTGCTGGAGGACATCAACATGCAGCACAAAAAGCCAGCCGACATCCCCCAGGGCTCCCTGGCCTACCTTGAGCAGGCGTCTGCAAATATCCCTGCACCAATGAAGCAAACCTGAGGAAAGGCACCCGAACACTAGCTGGTGCCGGAGTCAGCCCAAACACTATTTCACTAAACATCTCTTCTTGTAGACTTGACATTTTGGGAGAACTCTTTGCCAGAGAATGAGATGATTTTTGTTTTGTGCTCTCACCTAAAATTTGCCCCCTATTTTTGTAAGTGTTATTTCTTGAGTACTTTATAAAATGCTTATTGCTGTGGTAAACCAAGTATATTGTCTTTAGCAAAGTTTAAGACTGTTAGTGTGATGCTGTTTACAGATTTCTTTTATGTTGTTTTTTTTTAATGCTTGCTTTTATATTGTTTTTATTTTTGTATGACTCAATCTCTCTGTATTTCCAGTTTTAGATTAGTTTGTATGATATGATCTGAGCGCATATCAGATGATGAGGATTTTGGTTGTAGGCTTTTGTGGTAATTTACTGTTCAATGGCAGTATATAAAAATATGCAACTTTTCTGTTTTTCAAGACTTTGAACTACCTCAAGAAGAGGAGTCTAATGCACAGTGTAAAACTTCCAGAGCCTCACAGTGAGAATATTTTATAAATAGATCAGAAGAGGAAGAGGATTATAATATCGTAGCTTAGTGTAGTGACTGTTACTGTACTGCAGTAACCTAATGCTTTAGAAATCCGGTAGTATCCTTAAATTAATGTTGACTTTTATTTGGGGTAAGTTTATCTTTTGTGTAGTGTTTATTTACCTTTGGGGTGCAGTGGTGGGAGCAGTGATAATGCCAGTGATGTTCACTTCTGCAATAATGAATCAGTTTAACACAGTGGACCCTGCTCTCAACAGAGGCATTGGTGAATATGAACTTGCTGTGATCATCTCTTGAGTTTTAAGTTTTGTGTGTTCTGCTCTTTTGGAGCAGATTTTTTTATTAACAAAGGTTCTTGCTAATGGTGTTGATTCCAAAGGACTAGGACCTTGAAGTGGGAGGTGGGCTGCAGGGTGCATAGGAGACTCGGTGTTGGGAAGATACCTAACCCTCTGTTGGCCACAAAGGCCATCTCAGTTTCTCTGTTGAACTGTTGTTGAGAAATACAAACCAGCATTGTGCCCTGTCTCCTTAGATAAGGCTTTCCTTTCTCTGTTGTTTACAGTCCCTCATTAGATTACACCCCATCACCCACAACCCGTGCAGCACTGTCTTCTGAACAGGCAGTACTTCTGTGACTCAGTGTCTTGGCTGACTTTGTTTTCTCTGGTCTTGAAGGCCCCGCCCCACCCACCTTGACATCCACTCAAGTTTCCGTCTGGCCTGGATGCCACCTGGTCTCCACAGCCTCTGAAGGCCCTCCATCACATCCCCAGGACACAGGACCTCTTGTTTCTTCTGCCAGCATTGCTTGGTTCTCCCTCTGGGGTTAGTGATCTGTCTCTTTGTTCTCATGAAAAGTAGGCATTATTCCCCTCTGAATATAGAGGGACCATGTGTTATTTTTTATACGTAGTACTTGTTTTCCTGTGCTTTCGTGTATGGTACATAGCCTGAGGCCAATGAATTCCTTCAGTCAGAGTGTATAGGTAAAGCTTTTAAAAGTTGTTTTTAATCACATTATCTGATTTCAAGGTTGTTAACCTGATCACCTTATGCCAGTCAGAAACTCTGATTGGCAGCTTTAGATTTCTTGATTAAAAACCTAACCGATAACATTTTAGACATTCTTTCAGTAATGAAGAGGTTCTTAGTGAAAAGTTCAGAAACTGTTCTATTTGGTCCTTACTAAAAATATTTTGAATTAATGTGTGTACCAGTTATTACGATTTCTTTACTAAATTCAAAAAGTTTTCTGTCAATAACATTTCACTAAATATCTTTTTCATTTTTCGTGATGTATTTTGCTGGTCACCTAACACAGAATACCCTCTAGGATGCTGCCTCCTTCGAGCAGAAAATAATGAGGTATCAGCTGGGATTTCTCTCACCTTCTCTCAAGGGATGACAGACCCACCCACATTTTGAGGGCATCTTTATTCCCTTCCTGTTCTATCTGCTGAAGCATTTACACTGTGTAAGACAAGGCTTTCCTCAAGTGATGTGAGGCCAGGCCAGTTGCCTTCTGCTGGATTTAACCCGTTGGGGGCTCTGGTCTGCAGGTCACTCCCTGCAGCTCAGTGTTCTTGGTCTCCCATCTTCAGCATTCCCTTCGTGATACTTGAGCACCACCCGGTTGCCTGGCCCCTCATTCGGTCTCCAGCTCCTCCACATACTCTCACCTGCTTCACTTTGACACTTGATCATCTTTTTTTGAACTCATTCTCTTTAACACATCTTAACTTTTCTCTTTCCTCTTCTGCCCAGCCTATAAATGTCGACATTCCTAAGGGTTTGGTCACGGGCCTCTGGAGGCCACGAAGGAGCCCTGCTCAGTTTTCTCAAAGGCCTTGCTCTTCCCGGATATGACAGGCGTGGTGGGGTAGTGGAGCCACGTTATTTCTGCCCAACACAGACTTCTTTAATGGGCAGTCAGTCCTTGCTCTGAAGCTCCTCAGCCTGACCAAGGCTTTTTCTCCTAACTCTCCTGCTATCTAAGCTTCTTGCCCAAATCTTCTTGGCTCTCTCTACAGGTGTCAACTCTGTATCAAAATATGAAGCCTTTTCCTGCCTCCTGCCTCCTCCCCTTAATTCGACACAGGTGTTTCTCCTGAGACACGGGGAGACTTGGCCCTGACATCAGACACTGATTCAGCACTGCTGGGCTGTGTTATTCTCCTGTGAGACAGAAGCAGTCTAAGGGAACCAGCCTCCTAGACAAAGCTGCTCTGAGACCATGTTAGAGTAAAACAAACCACTTCACAACTCTGTATAAGCACAGGAAAAAAGAAGGGTCACACTGCCACCCCTCAAATACCAAACATTGTCCTGGCTTAAAAACAAAGTGACTGCAACTTTATTTTTTAACCATTTGCAGCCATTTATCTCTAGTCGGCCTTCACTGTTGTTGTTCAGTGGCTAAGTCATGTCCAACTCTTTGCAACCCCATGGACTGCAGCATACCAGGCTTGCTTGTTCTTCACTATCTCCTGGAGTTTGCTCAAACTCCTGTCCATTGAGTTGATGATGCCATCCAACCATCTCATCCTCTGTCATCCCTTTCTCCTCCTGCCTTCACTCTTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGATATTCACATTAGGTGGCCAAAGTATTGGAGTTTCAACTTCAGCATCAGTCCTTCCAATGAATAATCAGGGTTGATTTCCTTTAGGATTGATTGGTTTGATCTCCTTGCTGTCAAGGAGACTCTCAAAAGTCTTCTCCAGCACCAAACTTTGAAAGCATCAATTCTTTAGCACACAGCTCTCTTTATGGTCCAGCTCTCACATCTGTATATGACTACTGGAGTAAGATAAGATCCAGTCATAGAGTTTCCTCTGCTTTCTGACAGCATCCAATTTGGAATGAAGCCCTGCTCTTTTAGAATCTCCTTGAAATTATCCAGTGCCAAAATCTTACAATAGGATCTTTCTGAAACACTTTCTGAGAAGCCCCATGATTTTTCATGATGGACATTCTGCCTCTGTTCCAACAAATAAAAACCCAACTCATTCAACTATAGCTAGGTTTCTGGTGGTCTTTGCTCCTCCAGCTGTCTCAGTGTATGCCTCCTGGAGGGCCTGACTGACATGTTGCTGTGAGCACAGTCTGAGAGAATCGACAGCGGGGGAGGCTGGAGACTGGCTCACTCACTGTCCAACTGGCAGGAAGATCCATCCTGAGTGGGATGTGAGTTCCAGTTACCAGCACAAGAGGGTGGCCTCATTGAGGATTTTACCAGTGCTTCCCTGGGCAAGTTTCCCAGTGGAAGGGAACTTTTGTCAATGCACAGATTCAATGTTGCATATAAGAACGGTGGAATTGGCTGGTTAACACTCCACTGTCTTGACTCAGCAAAGGGACAATGACAGAATAACTGTTTAATACTCAAAGGCCTCTATGAGTTCCTGGAGCATCTTTGGTTTTCCCCTGCAGGGGGAGAACAGACAGCTGAGGAGCTAGTTGGAGGCAGCAGATCAAAACCAGCGTTGCACCTTGGGGATGATGGTGGAGATTAGTGCTCTTCTTAGAAACCTGAAGGATGCTAGGAAACTGGTCCCAGTCATAGCTCTGTTTACTTTTCCAGACTTGCCCTTGCAGAATCCAGGCAGAGGCTGGAGACCGAGTATGTAGCAAGTAGCCTCAGTTGCACCTGCTGTTGCACTGATACTGGAGCACTAAGGGCTCAGGTGTGCAGTGTGCAGCTGCTGGTTGCACAGCTTCACTCTTTTCTCCCCCAGCTAAGAAGCAGTTGGCAACTGGGAAATGTTCCTTTCCAGGTTTGTTCCAGGAATACATTAATTCCTCCTCTCTGTTATAATATAGCCTAAAGAGATACCCTGTTTTTCCTCCTACGTCAATTCTGAATCAGTTCATTTCTCTTCATGTCTGCTGTTAACCTCCAAGTCATCCCCATTATCTCTAATATTATCTATCAATATTATCTAGGGTACAGAGAGGTAGAATTTCATTCCCTGCTGGTGAAGGTGTAAATTGCTAGAAATTTTTGGTAATTTGGTAGTATTACACAGAAAGCCTAGGCATATCCTTTGATGCTTTATTTCAATACTCAAGGAATATATCCTAAAGAAAAAATGATAGATGCATGCCAAGATGTACTTAGCAAAGATAATTATTTGTGTATAATCTTAAAATTTAGCATGATCTTTAAGTCACATGCAACGAGTTAAAACTGATGTGGGGACTCAATAAAATTCTATCTCTGTAGCATATGTTATGCTGAATTAAATAGCCTCCTTTGTTAGTCATCATGGGAAAATACTTCAACAAAAATAGAACTACCTGTATGTACTCTTTTTAAAACACAAAACACTATTCTATAATGTTCACTTTAAGCATGAAATAAAACTAAAAAATACTTGATACTGAAAAGTAACAGGACATGTTACACGGACGGAAACAAGTATTTGCATTTAAAAAAAGTATGTTATTGGGCTACATGTTTTAATTAGGTAGTAAATTTACTTTCAAATTGTGAATCTGAGTTGTAATTGCATTTCTCTCAAAATGACCCAAGTGCATGAGCAGCTACATTTTATTGGAGATGATCTGACTGAGGTTAATGTGAACTCCCTGTTTCCAAGTTCAGCCTTTGTATAATTTCACCTCTGAAAAATCAATACAAGTCACAACCATTTTTATTGCCCAGTTTAAAGTTTTATTCAAAGAGCAAAGATTTGACAGTGCATGGAATAG EMBV3_21838 CCTATGTGGTCCTCGGCCAGTTTCTGGTCCTAAAGAAAGATGAAGACCTCTTCCGGGAAT Gene GeneID:360196|BANF1:NM_182988:497_cdna Constitutive 0 NULL GeneID:360196 29 GENE BANF1 NULL barrier to autointegration factor 1 EMBV3_12260 GACCACTGAAGGCTCTGTGAAGAATGGCAGCTCCTCCCGGGTCAGAATCTTTTCTAGGTT Gene GeneID:515950|HDC:NM_001024551:65_cdna Constitutive 0 NULL GeneID:515950 10 GENE HDC NULL histidine decarboxylase EMBV3_03124 TGAGACAGACGAGAAGCTCTGGGACCCTGTGGGCTACTACTACTCAGATGGCTCTCTCAA Gene GeneID:526028|SEMA4C:XM_002691138:148_cdna Constitutive 0 NULL GeneID:526028 11 GENE SEMA4C NULL sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C EMBV3_34473 GGTACTGAAATGGCAATCCTACCAACTGACCAACTTCTCAGCTCTTTTTGACCAGGATGG Gene GeneID:541211|DIXDC1:XM_002693011:216_cdna UTR3_Alt 2 NULL GeneID:541211 15 GENE DIXDC1 NULL DIX domain containing 1 EMBV3_31995 TTCGATAAGGCCAAGCTGAAGAAGACTGAGACGCAGGAGAAGAACACCCTGCCGACCAAA Gene GeneID:282385|TMSB10:NM_174623:23_cdna Constitutive 0 NULL GeneID:282385 11 GENE TMSB10 NULL thymosin beta 10 EMBV3_24983 TAGAACTGTGAAACTTCACAATACCGCCTCCCTGGTCGTCTCACCCTCCCCGTGTTGGTT Gene GeneID:525344|PRR3:NM_001034554:147_cdna Constitutive 2 NULL GeneID:525344 23 GENE PRR3 MGC128443 proline rich 3 EMBV3_19856 ATCCCCACAGTTTTTGACAACTATTCTGCGAATGTGATGGTGGATGGGAAGCCGGTCAAC Gene GeneID:619066|RAC3:NM_001099179:153_cdna Constitutive 0 NULL GeneID:619066 19 GENE RAC3 MGC166020 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) EMBV3_34270 GCTACCGAGAGGATCCAGGGAGGTGGAACCCCTGGGTGGCTTCATGAGCACAGCCGAGCG Variant GeneID:532242|RFNG:XM_002696134:264_cdna 394^482 1 EMBV3_21924 GeneID:532242 19 GENE RFNG NULL RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase EMBV3_35406 AGAAAGAAGAGCCTGGAGAGTTTCTGAATGTAGAGAAGTTCCATTTAGGGAAGAGGTCCC Gene GeneID:281481|SDHD:NM_174179:17_cdna Constitutive 1 NULL GeneID:281481 15 GENE SDHD NULL succinate dehydrogenase complex, subunit D, integral membrane protein EMBV3_25420 GCTGACAGTAAACAGACTGCGTCAAATCCCTCTTCATCTTATGCAGTATCCAGCCCGAGC Gene GeneID:528075|RNF17:XM_002691869:190_cdna Constitutive 0 NULL GeneID:528075 12 GENE RNF17 NULL ring finger protein 17 EMBV3_43308 TGTTTACTAGCTGTCCTGTGTCCCACTCCCCCTGAATAATTTTTGTCACTGGGGCTGAGG Gene GeneID:534604|MID1:XM_002700433:14_cdna Constitutive 2 NULL GeneID:534604 X GENE MID1 NULL midline 1 (Opitz/BBB syndrome) EMBV3_06991 CTCTTTTTATGAATGCTTACACAATGAGAGGAAAGGAGTTTAAAATTACACATCAAGAGA Variant GeneID:508345|APIP:NM_001075352:33_cdna 522^584 2 EMBV3_41210 GeneID:508345 15 GENE APIP MGC142303 APAF1 interacting protein EMBV3_19132 TGCTGCTCATTGCAGTGGTCTTCCTCCTCAATATCAAGAGGGCTGTATACTAAAAGGGAG Gene GeneID:540509|RGS5:NM_001034707:338_cdna UTR3_Alt 1 NULL GeneID:540509 3 GENE RGS5 MGC127135 regulator of G-protein signaling 5 EMBV3_18333 AACAAGAACATCACCAGGTAGCCGGAGCTCATCTCCCCAAGCCACGTCATCTGCAAGACA Gene GeneID:100335465|LOC100335465:XM_002692175:94_cdna Constitutive 0 NULL GeneID:100335465 13 GENE LOC100335465 NULL hypothetical protein LOC100335465 EMBV3_43033 GTTGAGATGTTTGCTCCAAGGAAGAATTTTTGACTAAAGAGACGTGTTCCTATTTTACCC Gene GeneID:535814|ZDHHC21:NM_001081534:3_cdna UTR3_Alt 2 NULL GeneID:535814 8 GENE ZDHHC21 MGC155155 zinc finger, DHHC-type containing 21 EMBV3_09356 TGCCAAACTCGAGAATATGCTGCAGAACTCCGTCTATGTCAACTTCCTGCTGACGGGGCT Gene GeneID:508334|LOC508334:NM_001102491:22_cdna Constitutive 0 NULL GeneID:508334 15 GENE LOC508334 MGC166197 hypothetical protein LOC508334 EMBV3_23539 GGGATTCTTAAGGGATTCTTCTGGGAAGGATGTCTCCCACCACTCCTCAACTGACCATAG Gene GeneID:282354|SLC1A3:NM_174600:12_cdna Constitutive 2 NULL GeneID:282354 20 GENE SLC1A3 MGC140731 solute carrier family 1 (glial high affinity glutamate transporter), member 3 EMBV3_24299 GGAGACCTGCACAGAGTGTAAACAGAGGTGGGATGACTAGAAACCGTGGTTCAGGAGGTT Gene GeneID:537706|THOC4:NM_001035417:117_cdna Constitutive 0 NULL GeneID:537706 19 GENE THOC4 MGC127512 THO complex 4 EMBV3_40730 TCTGGCCCATCAACACGCTGAAATGCATGCCTATAACCTGCCCTCCACCACCCATACCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17547 CAGAAATCAGACCACACACCGCCCTGCTTAAAATCCTCCTTTGCCTCCTGGCCTCAGCTA Gene BVV0102_100920 + 1 EMBV3_06171 GK000003.2:111483761-111493035 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180209 1 XLOC_109979 NonCoding TCONS_00180209 XLOC_109979 NonCoding NonCoding - 3:111484597-111486892 - TSS134968 2295 1 TCONS_00180209_1 107 0.386492374727669 1 0 0.00117975258283009 0.000227677037268584 0.000604835818745181 1.80917718079963e-05 0.000268909668320811 2.33794365743911e-05 0.000228694831636063 0.000229372866751895 0 1.7928098452127e-06 3.98986226927906e-06 0.000361463540923809 3.75069549735201e-05 5.73907767914435e-05 0.000252257544125889 3.4524958848747e-05 0.000122979912651451 0 0.000484312016724464 6.89375171867639e-05 1.45503347110496e-05 9.70022112936302e-06 0.000487684342113142 0.000168011646267015 8.75492852279574e-05 0.000101307363237185 0.000102120252032663 4.60378837543915e-05 0 3.92957784944011e-05 XR_232437.1 LOC101910063 PREDICTED: Bos taurus uncharacterized LOC101910063 (LOC101910063), 4e-42 178 72.13 0.156862745098039 0 noncoding 0 0 0 0 0.0303107089982576 0.795149869281253 0.0728360443424208 0.448812357522922 GCTGGGGAGTTGAGCATAAAACCAGCCAGATGTGGTCCCTGGCCTGTGACTCTCACTGGCTAGAGGAGACAGGCGGGAACTGTGCCCATCGGCCCTTGGTGAAGAGTAAAGATGCAAAGTTCTCCTGACTTGGGGGGCTCAGTTAGGAATGTTTCCTGGAGAAGACAGCATTAGCCAGGGGGATGGGAATAATCAGGAGTCTATAATAGGAATAGAAAAGAGTTTTATTTGAGCCAAACTGAGTATTCTTGCCCAGGAGACAGCCTCTCAGATAACTCGGTGCAACTGCTCTGGAGAAGCATGATTTTTCAGCACAGTTTATATCTTGTTAGAACAAAGAACGTCAAACAAGTGAGGGATATTTCAAAGTTGCGAAAAAATAAAACCAAAACCCACGAAATCACAGATCAGCAGTACACAGCGAGTCAGTACGGCCTTGGCACCTGGGAAGAAAATCTTATCATTGAAGGAGGAGCAGCATCGGTGTTCCAGAAAGGGAGGCGTGATGTAACCTTTATTTTTAACATGAACATTCTTTACTTCTGGCCAATGCACCCTTTTCTTTCATACTTAAAGCACTGTGCGATGTGTTTGATAGGGCCACAAACAGGATGTTTTAGTTAGCATAAAATTCGAATTAACTCTTGCATAAGCTGTGACTTCCCCATACTTAGATATGTGCAACTCTCATCAGCCAGGTGGAGGGTGGGGAGAATATTCTAGGCAAAATAACTGCAGGAACAAAGGCTGCCAGGTCCTGAGGCTGTACCTGCCTTGGTGGGAGAGGCCATAGGGCCTAGAAGTTGAGGCTGCTGTTGACCCCTGGGCCCTTAGGTAAGTTGCTCACACCCTGCTGCCTCAGTGTATTCCTCTGTAGATTGGGGACATAATAGATCCTACCCGTAGGGCTAATGGGAGATCCAATCAAAGCTCACAGCATAATACAAGTACACCGAAAGGTTTCCAATGGCTGGTGGCTAAAAGCGTTGTAACGAAACATTTCTGTGACCGAAAGGGTCGGTGGGTGGGTCTTGGTGGAGCAGAAAGCGCTGAGAGGGAGGCAGCTCAGGTGGAATACTGCTGAAGGATGGTGCAGCTCAGGAAACGGGATGTGGAAGGTGGTGTCTGAGGCTTGGTGGCAGAAAGGTCCTGCGTTTCTCCACAACAGGATTCAGCTTGTGGACTCCTGGTGTCCCATGACGGGTCCCCAAGGGTCCTGCCTTTGGAGGACCTCTGGGGCACCAAGTGCGGTGGGCTCAGCTCCGACCTCAGAACTTTCAGGATCAGGCTGAGCTGACTTCCCGTTCCAGGCCTGTCCCTGAGGACCATGCTGAGCTGAGCCTCCTGGACTTCCAGAGCTGACAACTGCGCCCACTAAGTTCTGACCTCCGAGGGCATGAGAACCGAGGTCCCTGGAGGCGGGTTCTCACCACGCCCCCACTGCAGCCTCTGCTCCCAGAGTTCCTCTCCTGTGGCTGGCTCTCCCAGAGCCAGATCTGATTTGATCCCATCTACTGGGAAGGAGGGAGGAGCTGCCTTCACCCTTCCCCAGGGGCTCTGGAGGTCAGAGTTTGAATGACCCCACCCCTTCTGGGAAGGGATGAGCTGGGGTCAGCCAAGACAATCCCACACCTGGCCCTTCCACCTGGGAAACATCCTTAGATCTCCACACTCCCCACCGTTCCCACTGCCCTGACCCTGTGTAGGCCACCATCTCAGTGGCCTCCCAACTGGTCTCCTGGCTTCCCGCCCAGCCTCCACCCTTCCCCAGAAATCAGACCACACACCGCCCTGCTTAAAATCCTCCTTTGCCTCCTGGCCTCAGCTACCTCTGCAGCCTCCTCTCTCTTCTTTCTCTCAACCATCCAGCCATACTTGACTCTCGCCTTTGTCTGTGCTGTTCCCTCTTACCTCATGTGCTCAGCTACTCGGGACTTTGCTCCATGTCCCTTCTCCTAGAAGGTCCCCTTGCTGGCCTCCTCTGGATTAGGCGTGCCCTCGGCGGCTCACCTACCGCCCCTGGGCACACTGTTGAGTTGTGTTAAGTTCATTCACATTATTGTGCAATGGATCTCTAGAGCATTTTCAACTTGCAAAACGGAATCTCTAGAGAGATGGAACACTCCCATTTCCCCGACTCACCCAGGGTGCATCGCTTACTTCTGTTTGTTGTCATTCCTCCCCTGGTGGGCCCCTTGAGGGCAGGTGACTGAGTCCTGTTTACATGCCCAGCACCTAGCAGGGAACCAGGCTCATATATAAATTTGTGAATCCAATAAATTATTTACTGAGGAC TCONS_00174762 . 5' 838 TCONS_00174762 . 5' 838 EMBV3_11814 AAATGATTATGGCATTAAGAGAAGCTTTGACATCCACGAATCCAAAAGCTGCTCTCAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32555 TCTGTGTTCAAGCAAGATGAGAAAGACAAACCTCAAGCTAATGTCCCCTCAGCGGTGCCA Gene GeneID:286876|CFDP2:NM_174800:67_cdna UTR3_Alt 2 NULL GeneID:286876 18 GENE CFDP2 MGC128687 bcnt p97 craniofacial development protein 2 EMBV3_31962 CATCAGTGGAACCAGGATGGTTGAAGGCAACTTATGAAGGCAAAACAGGACTCGTCCCAG Gene GeneID:508009|FLJ32810:NM_001075343:14_cdna Constitutive 0 NULL GeneID:508009 15 GENE FLJ32810 NULL hypothetical protein LOC508009 EMBV3_25413 CAGAGTGGGAAGTGAGAGGAGGTTTCCTTGGGACTACTGATTTCTTTGTGCTTTGGAGGC Gene GeneID:533207|GBF1:NM_001081600:177_cdna Constitutive 0 NULL GeneID:533207 26 GENE GBF1 MGC148393 golgi-specific brefeldin A resistant guanine nucleotide exchange factor 1 EMBV3_06116 TGATGGGGCTAAGTAATACCCAAAGCTCACCCTACCAACTATTTCCTCAGTACCTTGCAG Gene BVV0102_143731 + 0 NULL GK000001.2:82550284-82573989 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001347 1 XLOC_000327 Coding TCONS_00001347 XLOC_000327 Coding Coding LOC100140254 1:82540595-82551980 = TSS679 2456 1 TCONS_00001347_2 162 0.187296416938111 2 0.784434293745608 0.00555778508460835 0.00448824059389126 0.00396383791869753 0.00435832110496421 0.00402327747557805 0.00158533931340747 0.00382600952108032 0.00456247225421819 0.00790686206535918 0.00263186471262041 0.000769427904657373 0.000661800685382507 0.00157015003622339 0.00362342867655006 0.00332225212212391 0.0367897885196908 0.0171667315439752 0.0383565734317955 0.0038511651623861 0.00372450640215391 0.00168126868813877 0.0157815111420088 0.0142062013793034 0.0204301911697047 0.0040651246150311 0.00273385714035011 0.00263375784129734 0.00259293064329916 0.00184024529542867 0.00528642386421562 XM_005215615.1 YWHAZ PREDICTED: Bos taurus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ), 0.0 4089 98.93 0.943403908794788 XM_005251060.1 YWHAZ PREDICTED: Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ), 0.0 3303 91.60 0.943403908794788 TCONS_00001347_2 sp|P63103|1433Z_BOVIN 1433Z_BOVIN 14-3-3 protein zeta/delta; 1e-83 251 89.86 0.845679012345679 1 coding 0 0 0 0 -0.0314630382211034 0.823930389401175 0.000339865512311886 0.996082182367029 ATGGGGAAGTGGGAGCTCAGGGCCAGGGATCAGCAGCTGTTCTGCTTGGCTGCTGGCAGGGGTGCAGCCCAGCACACAGACGTCTTTCTTCTTCCTCGGAGAGAGTGGGAGGCCGCTGGTGGCAGCTACCGCTACTTGGCTGAGGTTGCAGCTGGTGATGACAAGAAAGGGATTGTGGATCAGTCACAGCAAGCATACCAAGAAGCTTTTGAAATCAGCAAAAAGGAAATGCAACCAACACATCCTATCAGACTGGGTCTGGCCCTTAACTTCTCTGTGTTCTATTATGAGATTCTGAACTCCCCTGAGAAAGCCTGCTCTCTTGCAAAGACAGCATTTGATGAAGCCATTGCTGAACTTGATACATTAAGTGAAGAGTCATACAAAGACAGCACGCTAATAATGCAGTTACTGAGAGATAACTTGACATTGTGGACATCGGATACCCAAGGAGACGAAGCTGAAGCAGGAGAAGGAGGGGAAAATTAACCTGCCTTCCAACTTTTGTCTGCCTCATTCTAAAATTTACACAGTAGACCATTTGTCATCCATGCTGTCCCACAAATAGTTTTTTGTTTACGATTTATGACAGGTTTATGTTACTTCTATTTGAATTTCTATATTTCCCATGTGGTTTTTATGTTTAATATTAGGGGAGTAGAGCCAGTTAACATTTAGGGAGTTATCTCTTTTCATCTTGAGGTGGCCAATATGGGGATGTGGAATTTTTATACAAGTTATAAATGTTTGGCATAGTACTTTTGGTACATTGTGGCTTCACAAGGGCCAGTGTTAAAACTGCTTCCATGTCTAAGCAAAGAAAACTGCCTGCATATTGGTATGTCCTGGTGGGGAATAAAAGGGATAATTGGTTCCAATCACAGGTGTAGTTGTGGGTACTTTTTAGGTTTGGAGCATTTACAAAGCTGTAGTAGAAATGGATATCCCATGGATATTGCATGTTAAACCATGTGTTATCTGTGGAATACTCAGACTCAGTGTGCACACTGTTGACTGCAGCTATAGAAGTGTTCCTTTAGTTGTGACCCAATTTACTCTGGATAAGGGCAGAAACGGTTCACATTCCATTATTTGTAAAGTTACCTGCTGTTTGCTTTCATTATTTTTGCTACACTCATTTTACTTGTATTTAAATGTTTTAGGCAACCTAAGAACAAATGTACAAGTAAAGATGCAGTAAAAATGAATTGCTTGATATTCATTACTTCATGTATATCAAGCACAGCAGTAAAACAAAAACCCATGTATTTAACTTTTTTTAGTTCTTTTTTTTTTTTGGTTTTGTGATTTTTTTTTTTTTTGATACTTGCCTAACATGCATGTGCTGTAAAAAATAGTTAACAGGGAAATAACTTGAGATGATGGCTAGCTTTGTTTAATGTCTTATGAGATTTTCATGAACAATCCAAGCATAATTGTTAAGAACACGTGTATTAAGTTCATGTAAGTGGAATAAAAGTTTTATGAATGGACTTTTCAACTACTTTCTCTACAGCTTTTCATGTAAATTAGTCTTTTGGTTCTGAAACTTCTCTAAAGAAAATTCTACATTTTTGGAAATTTATTCCTTATTCCCTCTTGGCAGCTAATGGGCTTTTACCAAGTTTGAATACAAAGTTTATCATAACGGTAAAATACTACTAAAATAACTACTACTGTTCCCAACCATGTCCTATACTCCCTCCTCCCCCTGAAAATTTTTTTCAGAGACGGGGAGTTGATTGAAAAAAGTAATGTTATTCCATTTAAAATTTTGGTATATGGCATTTTCTAACTTAGGAAGCCACAGTGTTCTTGGCCCATCATGACATTGGGTAGCATTAACTGTAGGTTTTGTGCTTCCAAATCACTTTTGTTTTTAAGAATTTCTTGGTATTCTTTAGCCTGTCTTCAATTTTGATCCTTTCTTCTTTCTATTTGTCAGGTGCACAGGATTACCTTTTTTAGCCTCTGTCTTGTCACCAACCATTCCTACTTGGCGGCCATGTACTTGGGGAAAAGGCCGCATGATCTTTCTGGCTCCACTCAATGTCTAAGGACACCCTGCTTCCTTTGCTTGCATCCCACAGACTATTTCCCTCTTCCTATTCACTGCAGCTAATCTCTCCTGAGTTGATGAGATTGTGTTATCTCCCTATACACCCTACCCTATCCTGAATGGTCTGTCATTGTCTTTGCCTTTAAATTCCTTCCCCTTCCTCTCTTTAAATAATGATGGGGCTAAGTAATACCCAAAGCTCACCCTACCAACTATTTCCTCAGTACCTTGCAGAAAACACCGAACAAAAATAACCATTTTAAAAGAGGTGTATTTTTTTTTTTTCTTCTAGAATGTAAGCTCCTCAAGAGCAGGGACAATGTTTTCTGTATGTTCTATTGTGCCTAGTACACTGTAAATGCTCAATAAATACTGATGATGGGAAAAAAAAAAATAG EMBV3_18776 TATCATCACAGGGGTAGCTGCAATGCCCAGGCCAGTGTCCTATCACGGATGTGTGACTAT Gene GeneID:533510|KLHL24:XM_002684884:102_cdna Constitutive 0 NULL GeneID:533510 1 GENE KLHL24 NULL kelch-like 24 (Drosophila) EMBV3_42794 GAGGTGCTTGCTCACTGCTTTCTGCTCATTCTCTGTGCACTTGTGGGTGTGCTACAGCCT Gene GeneID:783944|LOC783944:XM_002698966:110_cdna Constitutive 1 NULL GeneID:783944 28 GENE LOC783944 NULL hypothetical LOC783944 EMBV3_18375 TGACCTGGAGATCAATCCCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTT Gene GeneID:509172|SAMD4B:XM_002694984:167_cdna Constitutive 0 NULL GeneID:509172 18 GENE SAMD4B NULL sterile alpha motif domain containing 4B EMBV3_39972 GCACTAAGAGTGCTTGTGAAATGTGTGGGTAAGAAATTCCAACCTGTTTTTGATACTGGA Gene GeneID:528174|GPR133:NM_001034564:111_cdna Constitutive 3 NULL GeneID:528174 17 GENE GPR133 NULL G protein-coupled receptor 133 EMBV3_43386 TGGAGTCCAGACATTGGGGAGACGCAGCTGGACGTAGAGTTTCTCATGGAGCTCCTGGAT Gene GeneID:504464|RINL:XM_002695040:350_cdna Constitutive 0 NULL GeneID:504464 18 GENE RINL NULL Ras and Rab interactor-like EMBV3_28112 GCAGCACAGGAAAGTGAGGAGGAAATAAGCAAGATAAAGAATGGCCACCCAAGTCTGAGC Gene GeneID:520530|MDFIC:NM_001101102:60_cdna UTR3_Alt 2 NULL GeneID:520530 4 GENE MDFIC NULL MyoD family inhibitor domain containing EMBV3_15783 ATTCCTGCCTTAGCCACTGTCTTGCTCAGAGTCCGTGATGGCTTGGTCCTTGGTGTTTCT Gene GeneID:280857|MIA:NM_173936:496_cdna Constitutive 0 NULL GeneID:280857 18 GENE MIA NULL melanoma inhibitory activity EMBV3_42167 TTAAAAGAACTCTGTCATTGAGAAATTGTGGAACTCTTTGAATCTCTCGAAGAAGATTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25183 ATTCACTTTACCAGCATATCAAAGTCCACACAGGGGAGCGGCCATACTGCTGTGACCAGT Gene GeneID:525199|GZF1:XM_002692163:60_cdna UTR3_Alt 2 NULL GeneID:525199 13 GENE GZF1 NULL GDNF-inducible zinc finger protein 1 EMBV3_18530 AATCATCTCTGACACTGACTTCTGTCGGGAGGACGCTGTGTGTAAAAGTATTGTTTGGGG Gene BVV0102_228289 + 0 NULL GK000016.2:78343108-78402076 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070340 TCONS_00070336 TCONS_00070341 TCONS_00070348 TCONS_00070338 TCONS_00070347 TCONS_00070342 TCONS_00070346 TCONS_00070335 TCONS_00070337 TCONS_00070345 TCONS_00070339 TCONS_00070343 TCONS_00070344 1 XLOC_042190 Coding TCONS_00070336 XLOC_042190 Coding Coding DENND1B 16:78396244-78523372 j TSS52237 7728 1 TCONS_00070336_4 324 0.0681935817805383 14 0.939320521997687 0.000339558242210123 1.09779701680983e-06 0.000628907433686199 1.40035526866839e-20 0.000539875748581164 5.34616498354049e-14 0.000386015423766069 0.000187487718976857 1.8790047710667e-06 4.81757856847639e-05 7.82509232566312e-110 2.72759258192048e-05 4.96743897714776e-08 1.98566069860703e-14 0.000203008422107841 2.28891038756039e-16 0.000135685628151674 0.000365707571932088 0.000276686973336308 1.0883238079708e-06 6.0248301705904e-05 0.000274117480043155 5.70537457523511e-05 0.000910712923095927 8.30014663559524e-09 1.61694518304067e-19 0.000933415179353143 2.66521185811329e-33 2.6404962489136e-05 5.52073953321481e-07 XM_002694231.3 DENND1B PREDICTED: Bos taurus DENN/MADD domain containing 1B (DENND1B), 0.0 1.299e+04 99.97 0.93258281573499 NM_001195215.1 DENND1B Homo sapiens DENN/MADD domain containing 1B (DENND1B), transcript 0.0 1393 83.46 0.170807453416149 TCONS_00070336_4 sp|Q8K382|DEN1A_MOUSE DEN1A_MOUSE DENN domain-containing protein 1A; 2e-08 57.0 28.52 0.808641975308642 0 coding 0 0 0 0 -0.839251526074361 0.056358815733853 -0.0711748739674629 0.314257408440099 GCACTTAACTGCCTGTCTGCACGGCTCGGTCGCCCTGCTGTACCCCATGTACTGGCAACACATATACATCCCGGTGCTCCCCCCGCACCTGCTGGACTACTGCTGTGCCCCCATGCCGTACCTGATTGGAATACACTCCAGCCTCCTAGAGAGAGTGAAAAATAAATCACTGGAGGATGTGGTTATGTTAAATGTTGACACAAACACTTTAGAATCACCGTTTAATGACTTGAGCAGCCTTCCAAGCGATGTGGTCTCGGCCCTGAAAAATAAACTGAAGAAGCAGTCCACAGCTACGGGGGATGGAGTAGCCAGGGCCTTCCTCAGGGCACAGGCGGCTTTGTTTGGATCCTACAGAGATGCTTTGAGATACAAACCTGGTGAGCCCATCACGTTCTGCGAGGAGAGTTTCGTAAAGCACCGTTCAAGTCTCATGAACAGTTCTTGGAAACCGCAGTCACCTCCAGCTGTTTAAGCAGTTTATCGATGGTCGACTGGCAAAACTAAATGCAGGAAAGGGTTTCTCTGATGCATTTGAAGAAGAGATCACTTCCGGTGGCTTTTGTGGAGGGAACTCGAAGTCATACCAGCAATGGGTGCATACAGTCAAGAAAGGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAAGCCCTGCTGTACGAACAGCATATAAATTTGCCAAGAATCACGCAAAGCAGGGGATAAAGGAGGTGAAGAGCAAGCTTAGACACAAGGAAAATGAGGACGACTATGGGACTTGTTCCAGTTCCGTGCAATACACGCCCGTTTACACGTTACACAGCGAGAGGGGAGCAAACCTAGCCAGGCGTAAGCTTTCCCAGTCACGACTCAGGCCTCTGAAGAGCCTGGACGGAGCCCTAGATGCTGACGATGAGGAGGACGCCGAGAGAGCCAGCAAGTTGTCCTCTGAAGATGGAGAAGAAGCTTCTGCTTACTTCTACGAAAGTGACGACTCATTTGAACCAAGAGCAAAGGCTCCTTCCCCGGGTGAGATGGACTTGCTGGGTGAGATTCTGGACACGCTGAGCACGCACAGCTCGGACCAGGGGAAGCTGGCAGTGGCCAAGAGCCTGGACTTCTTCAGATCAATGGACGAGATAGACTACAAGCCCACGAACAAATCCAACGCACCCAGCGAGAGCAACCTGGCCCTGCTGTGCAGCGGCTCCGGGGACCAGGCTGGGTGGCACCGGGGCCAGGACGACAGCGCCCTGCTCGGCCGGCAGTTGCCTCCCTCGCCCAGGAAGCGGCTGTCCTCCAGCGCGGGCACCGACCCTCTGTTCATCCTGGAGGAGGAGGCAGGCGAGCGACCCCTCGGCGCAGGGCAGCCGGGCCCCCTTCCGGGCGCTGGAGCGCCCCCTACGGGGAGGAAGGAAACGCTAAGCCCGACTGTGGAAGACCCGCCGGAGCCGGGCCTGGGGCGGCGCCTGTCCACGTGTGTTCCCTGGGAGAAAGAAGGGAAAGAAGCTCCAGAGACCGCAGAGGGGTCTGGGCTGCTTCAGGAGGTGGTGTCCTTGTGTCACATCACGTCTGCTTTCCAACAAGACCTGCACGTCTCAGGAGGGAGGGCGAGCGGAAACCAAGCTTAGTCAGTGAACGAAGTGCCTGTTGCAGGCACCCAGCCTTCCACGGAGACATTCAGGAGCCCACCACCCCGTGTCGTAAACAAGCAGTGGTCGGAAAGGCGACTCTTCCTGCTGTCTGAAGTTGTTTTTCATTTGGGACACTTACTGTCCGCGCTTTCGTCTCATGCTATGTCGATGATCCATTGATTTTTTAAACGTAAAGCTAATTCTCCTCTTGTGCTCTTCAGTCAGGTACGAGTTTGTATGTATGTATGTTGCAAGTATATATTGAACATCCGATTTCCCAGTGTTCGGTGCTTAACGCCACTTATTTAAATTAAGTATGCATCTAACCCGCACACATAACCAGGAGCTACTGTACTAAGCTGGTTGAGCATGACCTGGCCAAGATATCAAAACCTATCAGAACTAGCTTGAAACTGTTGACCCACTAATTGCCTTAATCTTAAGCCTATATTAAGCATACTTAACCTAATTTATGGGATTCCATGTAAATTCTGAAAGATAAGTTATGTGTTCTGCAGAGCAATAATGCCTTTTTCAATTCATCAAATCAAGGACAGAATTCATTTTTTCAAAGTTTAAAAGCTCTCTGGTGGACACTGCAGCCATGTTTTCCAAAAAGTATAAAGGTATACACATTTACCTGCCACTGAGTGAGATCCATGAAGTGCTGAATTACAATGAGAAAGTAATGACTGCTGTTTACAAACGACACTTTAAATTTCTTCACAGCCTCTCTTTGCCTTCGCTAACTAGGAGTCACCCCAGAAAGCCAGATGAAACAAAGTGTCCTAGTTGAAAAATGTGCTTGTCTGTTTTTCCCCTAACTAATAATTCTCTATCAGAATGCTTCATGACATCTCAGACTTACCGCTAAAATGACTGACTTTGTATTCTGCAAGTTGTAGATCTGCAGGCCCCACGCGGAGCCAGGGTAGCGTCCCCGCGTCTCTCCGCTCAGCACGTCCGCGGCGTTTAAGGTCCTGTATCCGTGCAGTACGTCTTCACCGTTCCTACGCCGTGCTTCACGCAGATTTCCTTGGTTCTCCCCTCACATCCCGTTTCTGTCCCGGGATCCCGCCCGGGCCCACCTTACCCATGGCTGTCATACCTCCTCAGGCTCCTCTTGGATGTGACCGTCTCTAGCCCCTCCTGGTCTCTGACGACCTGGGTGGTTCCGAGGAGGACAGGGCGGGTCTGCTGTCGGCCGCGCCGCTCCCGGACCTGTCCAGCGTTTTTGGCTGTGGTCGCGCTGGGGCCGTGGGTCCCGGGGAGGGGCTCATAACAGAAAAGTGCCGTCTCCGTCACCCCAGCCTGCCCCTGGGGCTTGCGAACGTTGCTGCTGGCCGGGGTCAGCCGGCTGAGGAAGCGCTGGTCGGGCTCCTCCCGGGAAAGCCGCGCCTTCCCTCCGGTCCTCCTGCCATCTCCTGGAGGAGACACCACGCAGGGCCTCCCTGGGGTGGGGCTTGTGCTTCCGGTCTGATGCATGGTATCCACACACATTACTTGGAATTCTTCTGCATGGGACGTGGTCTCTCCTCCCTCAAATTCACTGTCACACTGGGAAGTTCTGAGAAGGATTCCTGCATTGATTATTCCTATGAGTCTAGCCAGTCATGAAGCAATCAGGAAAAAAACAAGTGATGTTGTGGTTCCTTGGTTGCTCGCTTGTTCAGTACATGTACTCTGTGCATCCCCAGTCATGATTGTTTTCTTAATTTATCATTTTAGGAAAGGTTTGACAAACCAGTCAAGAACTCCCGTCAAAAACTGTGCTCTAGAATATTTACTGAAATAAGAATTTAATTTTCAGTCAAGATCCTGGAAGAGGCTTTGTTAAAAACATTTCTTAAGATACTTATTCAGATCAGTCTTTAAATAATTTGAGAAAAATGACCAAGGTTTTCTTTTTTAAAGTAGATTCCAAAATCTAAATGGATATACTTTGGGAGGACAGTTATTCATTCATGTATATGAAGGAAGACAGATCTTGTTTTCCTTATAAGGATGAACTCTAAGTATTAAAGGGAAAAGTCTGTGATCCTTTTTTTAACACAAAAGTAAGATTCAAGGTTCTTGTTAAATTTTGCCTTTATATACTCATTACAAAATTCCATTTTATTTAAGTATATAAAAAAGTCCATTTATCAGAAGAGCTATTTTAAATGAGAAGGAAAAACTGTAACTATGGTTGTCAATCTGCTGGGCAGATATTCTTCATAATTTTTGAAAAGAATGTAAAATAGTCCTTGACTACGAATATTGGAATGAGGCGTTTTTTCCTTTAGAATTCTCCATTTGGAGAATGGGATCACTGTGAGTGTAGCCTTGATAGAATCTGGGTTTTAGTCCCACTTACCCAATAAGCTTCAGAGCCTCAGAAATGTGAGTTCTTCTCTTAGTCACCTCCCCGGGTGTTTCACCACGGTGTATGGTGAGGACAGTCACCCACCGACAAATCACATTTGTGTTAAGGTATTTTAAGCTGGACTTGTGCCTTATTTTAACATACAGAATCAGCTCTGATAGTCCACGTTAAAAACAAAAACTCAGCAAGTATTCCTATTTCAAACTGTTAACATTTTGAGTATTCAAACTCTGCTCTGAGACTAGACTTGCCTGTATCACGGTGGCTGTATGGAGAATGAAGGGACATTAAGGTGAGTTCTGAAATAACTGTTATCTCTTTCCTATGTTCATATTTTCTATTATAACTAGACAATATTTTCTATTATGTGTAAACTCCCCTGCTGTTTGAATTTTTCTCCCCCGAAGGAGCAACACCTGTCCTATGCAGAACTGTACAAACGACTCCGACCTTTGGTCCTGGGGCCTGTCTTTATGCAGCCTCTAGACAGTCACCATGCTCCCCAAACCCACTCTCTTTTTTACCCTAGAGGTACTGCATCCATGGTATTTCAGAGGATAGCAGAGTCCCGTGTGAATTTAGGAACTCTTGGTTCATTAAGTGTCGTTAAGTGGTATATTTTAATGGCTACCTACTTTAGCATATTTTAGAAAGGCACCAAAATATAGCATGACTATTTCTCTGATTAAAAATAACTCATTTGTTTAAGAAATGTTTATCCACTCTTGCTACTGTTCATAGGCAAGGTACAGTAACAGTGGACATAAGGAAAGAAAAGAATTGGCCGAGTGCCTGCTGTGCAGGAGCTAGTTAAAAGGAAAAGGAATTGTGAATCTCTGTTAATAACAACAATGATGTTAATATATTTTGCTTAGGAATTATTCAGCCAAGATTCTGTCACGAAAAAAAAAAAAGCCTTTTAAAGCTGCTTAAACTAAAACATGCTCTAAGTACAGAACCACTGTACCATCTTTCTCTGCTGTTACACGACGTGCAAGAATGCTGCTGTCTAGGAGACCTGCTCTTAAAGGACAGACTCAGAGGCTCTGAGAAGCCGGGTGTTCTCGTCCAGCTGGCTGTCCAGCACCCTCTGCTCCCTTGTACCCAGGCAGCGAGGCTTGGTGCTGAACGCGGCCCCTCGGGACCACCCGGGACCAGTCTCCACTCTGTTCAGGATGAACTGAGCATGTGGACGCCTGTCGACGGCAAGGAGTTCTGCTCTCTTTACCCTGATAACAGCATTCTCTGCAAACACTTCCCCTGCACCCCACACACTCGAAAGCTGTCTGTGACAGTGCTGCTGTGGAGTCTGTGCTTGTATCTAACAGACGAGACCCAGGAATGCTAATGAATTCATTGTTTCTGAAGTAAGGTGAAGAGGAAAAAAAACTGTGACTGTTGTCATAATTAGTAGATCTTCCTTCTTTTTCTAGAATATCTGGATTTTCAGGAAAAGATTATTTTCACGAAAAAATTTTCTAATGTGAATTCCATTTTGTTTCACATACAAGATCTTGATTCTGGCTGGATAGCTGTAGATCAGAACATAAAGGATGTAAAATGAACCCCAAACCTAATTCCCCCAAAGCATTTCTTCATATAGGAGATGGTTTTTTACAAACTCTGTCAGCACTGATGTCCTTCCTCTGTCTAGCCCAGGAATTTGTTAGTATCTGTTTCTTAAGTCTTGTTTAAGAGGCAGAGTTCTTTTGAGCAAATCAGTCAATGTTTTGATTTGGTCAAGATAGGGAATTATGTGTATTTAGAAAGAAGCATATTTTATCTTGAAAATAATATAGGATTTTGTGCAATATTTTTTTTCTTGCATAATTTAGTTCATATAAATATGCACATCTGCTTTTCAAGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTGTGTAGAATTGTATGTAGCAATGTTCCAGGTGATTTTAGGGGGAAAAAAAAAACTTTTTACTGTTGGCAGGAAAAATGTTTTTATTTAAAATAATTATGAATATTGCATTATTGTATCATAACTAACTGCCTCAGCAACAATGAATATGCAATAAGAGAATCCTGAACCTTAGATTAGTATTGACAGTAGTGTTACTTTGAAAGAAGTGTATATAGTGCAAAACGCTGATTCTTCATTTGTACGTTTCACACATGCTCAGTTCTGTACCACGTAAATTGAGATGGCATTTGTACGGTGATGACAAACCATTATGTCGACTGTAATATCCTTTGTGATGCATCTCTGGTAAGATTTATAAAGGGCATTGCCAATACTTTTTGACTGTAAATTAAGTTAATTTTTGTATAATGTACAGTTTGTTTAACCTTAGAGCTTCTATAGATTTCTACTTTTTATTATACTTGAATGAGGCAGAAAAGCACTGTGGAAAATCTGTAGCTCTGGATGTGACTTGCAAACATACCAAAAAAACAGAATAAGGTACTGAACTGAACAGCAAACTTAAGCAGACGCTTTCTATCCAGAAAGCTATGTTTTTCAAACCAGACTTAAATGAAGTAATTTCAACTATAGTAGTCTTTTATCATAAAAGATTGCTAAGTCACAAATGATTACCTCTTTGATACGAGAAACCTCTGAGCCTCTTCGCCTCTGTGTTACTCCATGTCTCAGAAGAGAGCCCTGCTGAGGTACGTTGACACCTCTGCCCTTTGCTATATTATATAACTTCCAGGACAAAATTTGACTCTGCATCCTGGGTTCACTGTGTGTGTCGAGTCACCATCCTTCAGATGGTCTAGTTTCCACGTGGTTACTCTGAGAACCACTGAATAATCATATACCAAAAATGAGATTTCTTGAATCTGTTCCAATTTAGTACTTAGAGCAAACAAATGTGAACTGCATGACATCTACATTTTAAAATGCATGAAGCTTTTTACACAAAAGGTACATGTGAGGTTAAAAACTGAACTTTTCCAAAGCTTATTTCTCTTGCTTTAAACGAATAACTGTCTGGAAGGACTGAAACGCTTGAGCCTTGTTTAGATGTGATGACGTACCTGAACACACCTGCCCATCATCGAGACCTCGCATCCTTGAGGCTACAGGATAAATCATCTCTGACACTGACTACTGTCGGGAGGACGCTGTGTGTAAAAGTATTGTTTGGGGGATTTAAAAATGTATGCAAAAGTCAATATTGGATGAACAACACATTACCATGAAGTGCCCAACAATGCAGGTTGAAAATAAAGTTGGTCATAATCAAACCCGCCTGGGGGTGACTCTTCTGTAATGACTGGCCAGCTCTCCCATCAGAGTTCCCGGTGAACTGTCACAAGGACCCCTGGCCCTTCATCTCAGAGCCTTAGGACTGCTGCGGTGTAAACTCAGGTCTAAGCCCTTCTGGCAGGCCTGCTGGGGAGGGAGGCGTCCAGTGTCTCATGTCTGGGCAGCCAACTTCATGAGGCTCATAAATGACAGAAGAGGTACGTCAGTGTCAGTAAGGTCAGCAGAACAGGGCTAGCAGCCAAGCCAGACCAGGACTTACTGACCTTCATGGAAAAGCCGCGGATGGATAGATAAGAGATAGAGGGTTGTCAACAGTGCTCCCCAGCCTGGGAAGGTGTGCTGATTTCCAGGGGCTCTTGGGCCCACCTAGAGCAAAAGTCAAACTTGAATTAAGCATAAAGTTTCCCTTGGGTGCAGAATTTCTGGGAATGATATGCTGAACTTTGCATAGAAGCAAAGGTCTTCCCTTGAGAAGAGAGAGAGTATCCTTCAAAT EMBV3_42618 AAGAAGGTGTATCTCAAAGTGCGGCCAGATGAGATTATGCGTGACTACATCCAGAAGCAC Variant GeneID:497012|UBTF:XM_002696042:328_cdna 832^942 1 EMBV3_04010 GeneID:497012 19 GENE UBTF UBF upstream binding transcription factor, RNA polymerase I EMBV3_18238 CCTACACGTGCTTGGGTTTGCTTCCAGAGCTATTTCACCTCTTGTGAGAGGAATCTTCCA Gene GeneID:513646|HECTD3:NM_001098961:161_cdna Constitutive 0 NULL GeneID:513646 3 GENE HECTD3 MGC157040 HECT domain containing 3 EMBV3_40318 AGGTGTCAGCACCCAGAACAGAGAAGGGCTCTTAGCTTGAGTACCACATGATGCGGAGAA Gene BVT0102_406699 + 1 EMBV3_21126 GK000018.2:14599519-14610727 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28358 AGAACAGGTGCTGCTGTCGGTGTGTGGCACTGTGGTTTAGCTGTGTTTATGCTCCAGAAG Gene GeneID:538640|ESRP1:XM_002692816:145_cdna UTR3_Alt 2 NULL GeneID:538640 14 GENE ESRP1 RBM35A epithelial splicing regulatory protein 1 EMBV3_38045 GTATACGCTGCCGAGAAGATCATTGGAGCTGGAAAGCCCTGGCACAAAAACTGTTTCCGA Gene GeneID:539381|CSRP2:NM_001038183:11_cdna Constitutive 2 NULL GeneID:539381 5 GENE CSRP2 MGC133755 cysteine and glycine-rich protein 2 EMBV3_32028 CTTTCTTCTGCCAGTCGAGAGCACCAAGCCCCAAAGACAGGTCCTGGATGAAGCCCTCCT Gene GeneID:534606|RPUSD3:NM_001038561:155_cdna Constitutive 3 NULL GeneID:534606 22 GENE RPUSD3 MGC133790 RNA pseudouridylate synthase domain containing 3 EMBV3_21203 TGCACTACAGTTTTGCCTCCATCATCTACCTCAAGCCCAAGGGCCCCCATTCTATGGACA Gene GeneID:616450|LOC616450:XM_002688590:316_cdna Constitutive 0 NULL GeneID:616450 7 GENE LOC616450 NULL similar to Olfactory receptor 10H4 EMBV3_34481 CCCAAACTATTGCCTGGAGACAGTTCGATATTCTCTTATAGAACAAATCAACGGCCACAG Gene GeneID:518544|CNO:NM_001080731:38_cdna Constitutive 0 NULL GeneID:518544 6 GENE CNO NULL cappuccino homolog (mouse) EMBV3_21973 CAGGAAAATTGGCAAAATGGAAATATGGCTCCGTGAACAGGAGGCCCGGGGAGAGCTTCT Gene GeneID:614197|LOC614197:XM_002690957:320_cdna Constitutive 0 NULL GeneID:614197 10 GENE LOC614197 NULL similar to Uncharacterized protein C14orf105 EMBV3_31419 CCCGGCACGTGTTCCTGACTGGGCCCCCAGGCAGGGGCCAGTGGTCGCCCAGGACAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25313 AAAGTTGAGGCAACAAGTAAGAGAAAACAGAAACGTGATGCTGAAATAGCCAGAACTATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33808 GGGTCTCAGTTTTCTAGCCAGCTACCTCGGTAACTCCAATTCAGGTTAACTTCCCTAGGG Gene BVV0102_202293 + 1 EMBV3_15586 GK000007.2:21196341-21204176 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215988 TCONS_00215989 TCONS_00215990 TCONS_00215987 TCONS_00215991 1 XLOC_131141 Coding TCONS_00215989 XLOC_131141 Coding Coding PIAS4 7:21202908-21227532 j TSS161200 2653 1 TCONS_00215989_4 358 7 0.892539495593551 0.00185423527243091 0.000602865442368597 0.000748023734601758 0.00143950206288055 0.000513478134091948 0.000239504095809321 0.000319935088061605 0.000119472215759939 0.000101503160373593 0.000482707366308538 0.000338394905491502 2.97241500074023e-05 0.000312663159129119 0.000361012886020867 0.000194586779058006 0.000766021524491954 1.51049131856071e-06 0.000566678092239577 0.000799280130754178 0.00117988898059068 0.000188081181882513 0.000806531588550795 1.59309958165686e-08 0.000348683617453843 0.000768858912848819 0.000621257230175395 0.000137078157734109 0.000448703395386099 0.000300904828125262 0.000184374714578465 NM_001083482.2 PIAS4 Bos taurus protein inhibitor of activated STAT, 4 (PIAS4), mRNA. 0.0 1258 94.64 0.279306445533358 NM_015897.2 PIAS4 Homo sapiens protein inhibitor of activated STAT, 4 (PIAS4), mRNA. 0.0 928 85.40 0.278175650207312 TCONS_00215989_4 sp|Q8N2W9|PIAS4_HUMAN PIAS4_HUMAN E3 SUMO-protein ligase PIAS4; 4e-166 479 90.11 0.692737430167598 1 coding 1 0 1 1 -0.0457685794673692 0.7420966807449 -0.0204018528776709 0.778669246149673 CCGCCCGCGAATGGAGGGCGATCACGTGACGCGACGGCTGGGGGCTCCCGGCGCGGGGGACGCTGGTGGCCAAGATGGCGGCGGAACTGGTGGAGGCCAAAAACATGGTGATGAGTTTCCGAGTCTCCGACCTTCAGATGCTCCTGGGTTTTGTCGGCCGGAGTAAGAGTGGACTTAAACATGAACTTGTCACGCGGGCCCTCCAGCTGGTCCAGTTTGACTGTAGCCCCGAGCTGTTCAAGAAAATCAAGGAGCTCTATGAGACACGCTACGCCAAGAAGAGCTCAGAGCCTGTACCCCAACCCCACCGGCCCCTGGACCCCCTGACCATGCACTCCACCTATGAGCGGGCCAGCTCGGTACCCAGGACTCCCCTCACAGGCCCCAACATTGACTATCCCGTGCTCTACGGGAAGTACTTAAACGGACTTGGACGGTTGCCTGCCAAGACTCTCAAGCCAGAAGTGCGCCTGGTGAAGCTGCCCTTCTTCAACATGTTGGATGAGTTGCTAAAGCCTACCGAGCTGGTTCCACAGAATAACGAGAAGCTTCAGGAGAGCCCCTGCATCTTCGCCTTGACCCCCAGACAGGTGGAGCTGATCCGGAACTCCAGAATCTGCTATTCAGACACCAGCAGCCCTCAGGAAGACCAGTACCCACCCAATATCGCCGTGAAGGTCAACCACAGCTACTGCTCGGTGCCGGGCTACTACCCCTCAAACAAGCCTGGAGTGGAGCCCAAGAGGCCGTGCCGCCCCATCAACCTCACCCACCTCATGTACCTGTCCTCGGCCACCAACCGCCTGGTGGACGGCTCGTGGTGCCCGATTCGCGCCGAGAAGGAGCGCAGCTGCAGCCCCCAGTGCCCTATCCTTGTGCTCGGCACCTCGGACGCCAATGGGCTCCTCTCTACCCCCAGCGTCAACGGCGGGGGCGGCAGCGTGCTTGGGGGTGCGGGCAGCGGAGGCGGCCCAGTGGGCAGCGTGGAGAATGGGAAGCCGGGAGCTGATGTGGTGGACCTAACGCTGGACAGCTCGTCGTCCTCAGAGGAGGAAGAGGAAGAAGAGGAGGATGAGGAGGACGAGGACGAGGAGGGCCCCCGGCCAAAGCGCCGCTGCCCCTTCCAAAAGGGTCTGGTGTCGGCCTGCTGACTGCTGGCCGCTGCCATGCCAGCCGGACTCTCGACTTTCCTGGTGCTCACCACTTGGAGGGGCACAGGCGGGCCTTGGGCACAGAGGGAGGAGTGATTTTTTTTTCTTTTCATTGTTGTTCATTTTGTTTTTTCCACCCCTTTCCCTGGCTCCTGGCACCTGTACCTCTGGACTCTCCCATCGGAGGATTAAAAAAAAGGAAAATGACAAAAAAAAAGTATAAAAAAAGAAAAAGAAAACAAAAAGCAAACTGAAAAACAAGGCAAGCCACCCACACAGCCGCTTCCCTGGCCAGTGTCGGAGCCCAAAGTCGGAGCCGACCCTGAGGGGAGGCCCAGGACGCCTTGACCCCGGACGACCATTCCAGCTGGTGCGAGGGACCGGGTGGTGGGAGTTCAGGGAGGACTGGCAGCCAAGTGGCCTCTCCCTGGCAGCGGTGGCAGCAGTGGCCACAAGTCTTGACATTCATCTGTTCCTTTGCTTTCTCTCTCCCTGCTAACATGCTCTCATGAGAGCCCAGAGCAGGGAGCCTCTTAGCCAAGAAGCCATGGAGTGGGTGGGGGTTGGGATGGGGCCTTGGGGGGGCAGGGGTGGGCAATGGGGGGACGTGGGGGGCCTGGGAGGGTTTAGCCACAGATGTGTTGTATTTTTTGAAAGTGCAATAACTTGGTATTTTGAAGACTCGGCATGTGGCCAGGGCCCCCCCCACCCCCCTGGCAGCAGGCGGGGGCCCCAGGGCGCGGCACCGTGTGGCGTGGTGGGGGGGTGGGTCTCAGTTTTCTAGCCAGCTACCTCGGTAACTCCAATTCAGGTTAACTTCCCTAGGGAACAGTGCAGGTGTCCACGGACACCGCCTCCTCGGTGGGGTGGGGGCTGCCACTTCGGAGGGGTGGCACGGACCTGCCTGGCCTCTCCATTTGGGGTGGTTCCTCCCCCATCTTCTTGCTCTTGGGTTTTCCGACGGGTACAAGGCCTGCCCGGCTCCCCCCTCCCCCGGGAGCCTCACTCTGGTCTTCCAACAGGACTGGGCGTCAGCTCCCCGCCCGGCTCCACCCGCCCCCCAGTGGCTCCCAGCCTGGGGGGTGGTTCAACGACCATGGGGGCTCCCGCAGCGGCCCCAGACGCCTCCACTGGGTGCCCAGCCCCCCGCCCAACACCCTTGTCCCCTGGAGGCCGCACCTGGTTCTCCAAGACCGCCTGTGCCCGCCGCTCTTTTTTTGCTTTTATTCTTCCCTGCACCCCTCACCCTCAGACCCCAGAATAATTTTTCTTTGTATGAACAGAACTCTCCTAGTCAGGAAGCAATATCATTTCAGGTCTAGAGAAGAAAGGGACGTAAATCTGGTCGAGGGCAAATTCAGTTTGCTGTATAAACTCGGTTGCGCAGTTCGGCCCCCCCTCTGTCTGCACCGGCAGCTGAGGGCCACTGTTTTCTAATATTTGTATTCTAATTTAATTGTTTTTTAAAAACGCAAATAAAAAAGTCAAGGTGAAGCTACCAT EMBV3_39208 GGGACCCACTAGCCTGCCTTACACACAAACACACAGGAAAATGATCGATGGCTTAGAATG Gene GeneID:100196901|LOC100196901:XR_082717:113_cdna Constitutive 0 NULL GeneID:100196901 19 GENE LOC100196901 NULL hypothetical LOC100196901 EMBV3_43008 AAGGTTGTATTCTGAAGCAGACTTGCCCATCTCATCGCCCAAAGAGGCTGCTGAGTACCA Gene BVV0102_064195 + 0 NULL GK000023.2:23468245-23795771 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136778 1 XLOC_082989 NonCoding TCONS_00136778 XLOC_082989 NonCoding NonCoding - 23:23791672-23793040 - TSS102068 1368 1 TCONS_00136778_3 107 1 0 0 0 0 0 0 0 0 0 0 0 5.02014567047601e-06 0 0 0 0 0.00102325477614543 0.000230587218509107 0 0 0 0 0.000981828821065096 0.000207891440422956 0.000428919396317957 0 0 0 7.02133141763266e-06 0.000127753047653347 0.000149427428435929 NM_138694.3 PKHD1 Homo sapiens polycystic kidney and hepatic disease 1 (autosomal recessive) (PKHD1), transcript variant 1, mRNA. 1e-109 401 76.01 0.428362573099415 0 noncoding 0 0 0 0 0.0339113899633049 0.830612934677001 -0.0170001600111559 0.715713100326823 CTGAATTGTTCCAAGCAAATAAATCTCCAGTCTGTTTTGAGGTAGGAGAAATGTTTGTAAACAACCAAATCTATGAATTTGACTGTTTAAACCTCATTTAACTTCATAAAAAGATGTTTTGTCCCTTTAAAAAAATTACATTCTGGAAATATAGTTTGTCTTTCAAATATGTCTGTTAATTGCTCATAGTGACATAGTGTAAGCTGAAATCAATTGTTCTACATTCAGTACAGTAATTCCTTCTGCTTATAGTTCTTTCAATATTGACACTGAATACAAGTTCTGGAAACAAAATATGGAATAAATACATGAATTTTAAATGACAGAATTAATTAAAATCCTTTACTTTTATTGACATGTACATGACATTTTATAGAAGCTTGGTTGAATAATATTTGCATGTGATCTATATTCAGTTTCATCATATTCATTTTGCATATAGTTTGCATACATTTCAATGTAAAGTAATTTTATACATTCAGAGTTAGATTGCTAAAAGGAAGGGAATCACTCAACTGAATAATCTATGAAAGGGGAGGGTTCTGAAGGACTAAAGCCTCTTGGTACTCAGCAGCCTCTTTGGGCGATGAGATGGGCAAGTCTGCTTCAGAATACAACCTTGGTTAGATTGGCCAAGGCTTTCTCTCTGAGAGACACATGAAGCTCTGTCAGAGACTGGTACCTTCCCTGTACACATCCCCCAAACTCAAGAGATAATGAAAACTACTCCAGCTTCCATCATCCCTCTCAGCTTTAACATCCATAAATATTTACAAATATTGAACGGTCTAGAATTTTAGTTTGTTCAATATCTTGGGGGAAAGGAGTCCTTCAAACATAGAAAATCAGAAATGGGAGACAAGAAGTTCTTTGAAATTACACAGGAACAAGACATTTTAAATTACTTATTTGAAGAAAGGGTAAGTTTTGATACTGCTGGGAAACATTTACTGGGTCCCCTATGTTAATGGTCTGAGTAAGTTTGGGGTTGGCTTTATCTAATCAGCTCATCTTCAGACATAAATGAACCAAGAACTGCTCTCTTTGCCTCTAGAATTTACCCAATTCTCCCATTTTTGGAGGAGGAAAAAAAAGACTGCCTTAACTATGGGTTGGGGATTCTGGCCAGACTCTGAAATCCCAAGACACATCCAAGAGCCCTCCATGTTACTCTGGATAATCTGGTTGCTATTCAGGTCCAAAGAGTCCATTCTGGACTTGGGGATCCTAGATTTTGGTGGCATAGAGTTAATAGGTCAACTCTGGCTGTTCCCAAACAAGCATAGGATCAAACTTGCCTTCCAGAAAGATCAGGGTTTAGCACATAGGGGATGGAAAAGAAGATAGTAGAAATTGAGAGAAGTGTAA TCONS_00134406 TCONS_00134407 . 3' 80 TCONS_00134406 TCONS_00134407 . 3' 1447 EMBV3_05692 ATCACCACATTTGGGTCTCTCAAGACCATTAAGTCAGCGTCCAGCACCACAGCTGCCCCT Variant GeneID:525329|NCOA4:NM_001075868:26_cdna 555^644 3 EMBV3_36633 GeneID:525329 28 GENE NCOA4 MGC138109 nuclear receptor coactivator 4 EMBV3_03160 AGATAGAAGGGACACCATTAGAAACTGTCCAAGAGAAACTGGCCGCACGAGGACTAAGGG Gene GeneID:338073|NDUFB3:NM_176667:64_cdna Constitutive 0 NULL GeneID:338073 2 GENE NDUFB3 MGC128543 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa EMBV3_28928 ACTATGAGTGGGACTCAGAATTCCCAGGGGACATGGAGTTGCTGGAGACTCTGCACTTGG Gene GeneID:504209|IGSF9:XM_002685870:16_cdna Constitutive 0 NULL GeneID:504209 3 GENE IGSF9 NULL immunoglobulin superfamily, member 9 EMBV3_31034 AGCTCCATGGCAGGAGGGGGCTTCGATCTTTTCTAAAGTGGGTGGTTTGTCTTTTGGTCT Gene GeneID:523701|NCAN:XM_002688521:93_cdna Constitutive 0 NULL GeneID:523701 7 GENE NCAN NULL neurocan EMBV3_36026 CACATTTCATTGTACTCAAGGTACAAAATGAGCGTCAGGAGGGGGTCCTATACGTGCAAG Gene BVV0101_063574 - 0 NULL GK000011.2:62993856-63240040 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05014 GTTTCATGCTCCAGCTCCACTTCTGTGGGCCTAATGTCATCAACCACTTCTTCTGTGACC Gene GeneID:785899|LOC785899:XM_002693808:45_cdna Constitutive 0 NULL GeneID:785899 15 GENE LOC785899 NULL similar to Olfactory receptor 5AN1 (Olfactory receptor OR11-244) EMBV3_23739 TTCCAAGAGAGAGCATCCCAAAAGAGCAAGCTTGTAAAAATTAAAATGAATAAACTACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34314 ACAATGTCATCAACCACTTCACCTGTGAGATCCTGGCTGTCCTGAAGTTGGCCTGTGCTG Gene GeneID:532403|LOC532403:XM_002689713:192_cdna Constitutive 0 NULL GeneID:532403 8 GENE LOC532403 NULL similar to olfactory receptor MOR262-6 EMBV3_33913 GTAGACAAACCACAGTAGAGCCTCAATATCTACCCCTCACAAAGGAAGATGCCAGCGAGG Gene GeneID:617602|EXD1:XM_002690822:71_cdna Constitutive 1 NULL GeneID:617602 10 GENE EXD1 EXDL1 exonuclease 3'-5' domain containing 1 EMBV3_01441 GCCTCCGCCTCAGTATCGGCTCTGATTGGAGTCGGTGAGCTGGTAAAGGTTACGAAGATT Variant GeneID:512841|CRK:XM_002695681:213_cdna 767^937 1 EMBV3_04761 GeneID:512841 19 GENE CRK NULL v-crk sarcoma virus CT10 oncogene homolog (avian) EMBV3_38394 GATGTAGAAATGCTAGCGAGTGGTATGTGAGATGGAGGGAAGCCTGTGCAGTGCTGGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10422 AGCGATTTGCCCAAGCCAGCACATTGACCTACCATGTTCGAAGGCATACAGGAGAAAAGC Gene GeneID:539376|Mynn:NM_001035424:34_cdna UTR3_Alt 4 NULL GeneID:539376 1 GENE Mynn MGC127144 myoneurin EMBV3_28392 CTAAACGGTTCAGTTTCCTCCACGCCTACAGACTGAGTCCCAAGGGCAGAGCGTTTAAAA Gene GeneID:510244|CDKN2D:NM_001046050:17_cdna Constitutive 0 NULL GeneID:510244 7 GENE CDKN2D MGC137547 cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) EMBV3_18219 ACATCTACGCCAACTACCGAGCGGTCCGGGCCCTTGTCATAGAGACCTTGAATGAACAGC Gene BVV0102_284910 - 1 EMBV3_15718 GK000025.2:27781372-27788270 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146753 1 XLOC_089202 Coding TCONS_00146753 XLOC_089202 Coding Coding C25H16orf58 25:27781383-27795501 j TSS109651 1477 1 TCONS_00146753_2 462 13 0.896295246865481 2.76351367954118e-05 6.80327923576411e-06 0 9.55770185030111e-05 0 0 5.91493207572074e-05 0 0 8.35710633419707e-06 0 0 9.71322897636239e-06 0 3.43394022246397e-06 0 0.000989166805806062 1.69877481184285e-05 0 0 5.75105641971812e-05 0.000438081737435574 6.83239989911862e-05 9.66629909400439e-12 2.81444013484917e-05 0 0.000174544120275329 2.17798897989587e-05 1.09411253705145e-05 0 NM_001076973.1 C25H16orf58 Bos taurus chromosome 25 open reading frame, human C16orf58 (C25H16orf58), mRNA. 0.0 1103 99.68 0.416384563303995 NM_022744.3 C16orf58 Homo sapiens chromosome 16 open reading frame 58 (C16orf58), mRNA. 0.0 1709 86.56 0.966824644549763 TCONS_00146753_2 sp|Q96GQ5|CP058_HUMAN CP058_HUMAN UPF0420 protein C16orf58; 0.0 752 83.84 0.989177489177489 1 coding 0 0 0 0 -0.0681687265519049 0.69143418956227 0.0410895124571217 0.395821505540574 TTCCCATCGTGCAGGGCTGAGGGAGGGTCTCGGGATGGCTGATGTGTTGTGCTCCGAGCAGTTCGGCTCCGGGGCGGCCCGGGGGTGCCGTGCCGCCCCCGACGGGAGCCTGCAGAGGGAGGCCTGGGGGCGCCGCTGGTGGGGGTTCTCCGGAGCCTTCACAGCGAAACCCGGAGGACGAGATGGGGGCGGAGGGGTGGCTCCCGGGACTGCCTCCCCACCTTTCTCCCGGCTGTTGGCCGTGTTCCTGCCTCAGGGCTTCCCCGATAGCGTCAGCCCGGACTACCTGCCCTACCAGCTGTGGGATTCCGTGCAGGCCTTTGCTTCCAGCCTCTCGGGCTCCCTGGCCACCCACGCAGTCTTGCTGGGCATAGGGGTAGGGGACGCAAAAGCCTCTGTTTCAGCTGCCACAGCCACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGATGGGGAGCAAAATGGACTGTAATGCCAAGCAGTGGAGGCTTTTTGCTGACATCCTCAACGACATCGCCATGTTCCTCGAGATAATGGCTCCCATCTTGCCCTTCTGTTTCACCATAACTGTCTGCATCAGCAACCTGGCCAAGTGCCTCGTGGGTGTGGCTGGTGGGGCCACTCGGGCCGCATTGACCATGCATCAGGCCCGGAGAAACAACATGGCCGACGTGTCAGCCAAGGATGGCAGCCAGGAGACGCTGGTAAACCTGGCGGGGCTCCTGGTTAGCCTTTTGATGCTGCCCCTGGTGTCCGATAGCCCCAGCTTAAGCCTCGGCTGTTTCTTCTTCCTCACTGCCCTGCACATCTACGCCAACTACCGAGCGGTCCGGGCCCTTGTCATAGAGACCTTGAATGAACAGCGGCTCTGGCTGGTCCTGAGGCACTTCCTTCAGCGGGGAGAGGTACTTGGCCCCACATCAGCCAATCAGATGGAGCCACTGTGGACAGGTTTCTGGTCATCTGTGTCTCTATCCTTGGGGGCCCCCCTACACCACGTGACGTCCAGTGTCTCTGAGCTGCAGCAGCTGGTTGAGGGGCACCAAGAACCCTACCTCCTTCGCTGGGACCAGTCACGAAACCAGGTACAGGTTGTCCTGAGTCAGATGGCAGGACCTAAAGCCATTCTAAGGGCTGCCACTCACGGGCTGGTGCTTGGAGCCCTGCGGGGAGATGGACCCCTCCCAGAAGAGCTGGAGGAACTGAGGAACCAAGCACAGGCAGGTCCTGAGAAAGAGAGCTGGGTCGTTGTCAGGGAGACACACCAAGTGCTGGACAAGCTCTTCCCAAAGTTCTTGAAAGGTCTACAGGATGCGGGCTGGAGCACTGAGAAGCACCAGCTAGAGGTGGATGAATGGAGGGCCACGTGGCTCCTGTGCCCAGAGAAGAAGGTCTTGTGAGCATCCCTGCCAAAGGCCCAGGTCTCAGGACAGGGGCTTGGAACAAGGACACTC EMBV3_22465 ACTCCAATGTTTCTTGGGTGTCCTGGGAAGACGTCCAGTGTACCTATGGGAATCACAGCT Gene GeneID:515202|USP18:NM_001017940:2_cdna Constitutive 1 NULL GeneID:515202 5 GENE USP18 MGC157182 bubp43 ubiquitin specific peptidase 18 EMBV3_34511 AACAACTCTGAAGTGTATTCTGTAGCATCTGCCTCCAAGGGTCCCCACCAGTTGCCCGCA Gene GeneID:515225|GHDC:NM_001075703:142_cdna Constitutive 1 NULL GeneID:515225 19 GENE GHDC D11LGP1 GH3 domain containing EMBV3_01875 CTGCAGGTGAGAAGGCTACTACAGGAGGAGTAAGAACTATTTTGGGGTTAGGGCCAGAAC Gene BVT0102_062557 - 1 EMBV3_35283 GK000022.2:60494235-60502718 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10389 CACAGCAAGCGTGGACCAGAAGACAGACCAGCTACTCCAGCAAACCATCAGCAAACGGTT Gene GeneID:508399|ABCC10:XM_002697300:138_cdna Constitutive 1 NULL GeneID:508399 23 GENE ABCC10 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 10 EMBV3_24634 TCACTGTGTGGGACAAGGCCGGGGATTCAGTTTTTATGATGAATTGTTAGCTGGTGGCAT Variant GeneID:534778|RNLS:XM_002698371:161_cdna 177^282 1 EMBV3_31785 GeneID:534778 26 GENE RNLS NULL renalase, FAD-dependent amine oxidase EMBV3_28434 GCAAAGCTGCAGGTGATACAAACTACTAAGTGTTCTATATTGCATGAAGAGATTTCTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17934 CCCGCACAGTGTTTGTGTGCGACGAGGACGCTACCCTGGAGTTGAAAGTGAAGACTGTCA Gene GeneID:522919|GNPDA1:NM_001080287:241_cdna UTR3_Alt 2 NULL GeneID:522919 7 GENE GNPDA1 GNPI glucosamine-6-phosphate deaminase 1 EMBV3_32863 GCGGGCTGCCGGCCTGGGGCTCCTGGCTCTCTTTGTCTCAGTAAAGGACCTCAGGACCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11853 CAGTAGAACCATCCAAGGGAGCACTGAGTTTAAGATGTCCTCATGTTGGAAACCCAAGTG Gene GeneID:510920|CDK20:NM_001098933:20_cdna Constitutive 2 NULL GeneID:510920 8 GENE CDK20 CCRK MGC154961 MGC166397 cyclin-dependent kinase 20 EMBV3_04957 AACTGAAACTAATTTGGATACAGGAAAAAGGTCTCACAGAAATCTCTTCTTATCTAAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36374 TGTAGTAGAAGCATGTTCCCTCTGACAGGGCATTGTGGTGAACATAAGCACCTTGGTAAC Gene BVT0101_031089 + 0 NULL GK000013.2:55506985-55509691 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045651 TCONS_00045644 TCONS_00045657 TCONS_00045658 TCONS_00045643 TCONS_00045650 TCONS_00045655 TCONS_00045654 TCONS_00045656 TCONS_00045645 TCONS_00045647 TCONS_00045652 TCONS_00045653 TCONS_00045649 TCONS_00045648 TCONS_00045646 1 XLOC_026494 Coding TCONS_00045658 XLOC_026494 Coding Coding LSM14B 13:55508670-55518745 = TSS33268 2119 1 TCONS_00045658_3 397 11 0.790748461385746 0.0129637772294844 0.0077108040781027 0.00791283854026411 0.00475373182778032 0.00614703962626111 0.00265416766089782 0.00132420098751227 0.00153893633520801 0.00322940559548075 0.00171412942760354 0.000152120155148608 0.00023696048849325 0.000568651661577546 0.00291799287343544 6.48203087866253e-05 0.00179533098837448 0.00128786741987583 0.000239115608595543 0.00579161628167341 0.00863036034912972 0.00267035078264417 0.000593546263486582 1.14023775200455e-20 0.000811868216542474 0.0096358255390511 0.00778008664400382 0.00608138417901314 0.000482709114591903 0.000310581126871585 0.00173688587092984 XM_002692257.3 LOC529294 PREDICTED: Bos taurus protein LSM14 homolog B-like (LOC529294), 0.0 2028 100.00 0.529966965549788 NM_144703.2 LSM14B Homo sapiens LSM14B, SCD6 homolog B (S. cerevisiae) (LSM14B), mRNA. 0.0 1541 83.91 0.672015101462954 TCONS_00045658_3 sp|Q9BX40|LS14B_HUMAN LS14B_HUMAN Protein LSM14 homolog B; 0.0 578 90.75 0.869017632241814 2 coding 1 1 1 0 -0.681361185880582 0.13751015436376 -0.0871592611002508 0.253202555130801 ATGGGCTCCCCGGGCCCCGGAGGCGGCGTATTTGTGAGCCGCAGCCCCGCGCTGCCCGGAGTTGGGGTGGGGAGGAAGTTCCTCAAGGAGACAGTGACACTGCTGGTGGGCGTCCATGTTCAGGGCCCCCCTCTCCCATTGTTTCTCTACCAGCTCCTCCCAGTGAGGTCCTTCGGTACTGAAGACCGTCCCACAGATAGGCCTGCTCCCCCTAGAGAGGAGATTTATGAGTACATCATCTTCCGGGGAAGTGATATCAAAGATATTACTGTGTGTGAACCTCCGAAAGCTCAGCACACGCTCCCTCAGGATCCTGCTATCGTTCAATCTTCCCTGGGCTCGGGCTCGGCCTCCTCCTTCCAGCCACACGTGCCTTACAGCCCCTTCCGAGGGATGCCGCCCTACAGCCAGCTGGCCGCCAGCTCCCTGCTTAGCCAGCAGTATGCCGCTTCCTTGGGTTTAGGAGCCAGCTTTCCATCTGTCTCAGTCAGCAAGAGCCCCATGGTGGAGCAGGCCGTCCAGACTGGATCTCTTGATAACTTAAACTCCAAGAAGCTGTTACCTGGCAAGGGCACTGTGGGCATGCAGCTCAATGGGCGCCCGGCCCCACCCGGCACCAAGGCCACCACCGATATAGCTCAGCCAGCAGCTGTGCAAACTCAAGGGCAGGTGAATGACGAGAACAGAAGACCTCAGAGGAGGCGCTCAGGGAACAGACGAACAAGGAACCGCTCCAGAGGGCAAAGCCGTCCAACTAACATCAAGGAAAACACAATCAAGTTTGAAGGTGACTTTGATTTTGAGAGTGCAAATGCCCAGTTCAACAGAGAAGAGCTGGACAAGGAATTTAAGAAGAAACTGAATTTTAAAGATGACAAAGCTGAGAAAGGGGAAGAGAAGGACCTGGCCGTGGTGACCCAGAGTGACGAGGCCCCTGCTGACGAGGACCACTTGGGGCCCAACTGCTACTATGACAAATCCAAGTCCTTCTTTGACAACATCTCCTCTGAACTCAAAACCAGTTCCAGGCGGACGACGTGGGCTGAGGAGAGGAAGCTCAACACGGAGACCTTCGGAGTGTCAGGGAGGTTCCTCCGAGGCCGTAGTTTCCGGGGTGGATTTCGAGGGGGCAGGGGCAACGGTGCAACCCGCCGTAACCCGACTTCCCACAGAGCTGGGACCGGCAGGGTGTAACGAGGCAGCCAAAGGCTCTTGCTGAAGCGGCACGGGTGCCAGGCCGTGTCTACGAGGATGATGGAGAACGCTGCACTTACTGGGGGAGATGTGGTCACTTCGTTTACTGAGTTTGGAAAGTTCCACGCTACTTCTTAAGTTTTGGACTGAACTTGGATGTGGTCTGGGTTAGAACCTCTTGTTTGGGGAAGTGTACATGGGAAACCGCTTTGAGGTTTCCTAGCCTATTTTTCCTTTTTAGTTGTGCACAGCCTGATTCTAAGGTTTTGGTGTTCTGCAAAAAGGTTCTGGAGCGAAAGCGTGATCCTCATTTTGTGACCTTTCTTGGACAGCTTTGACTTTAAGGTGGAACCAAATTTCATTTGGCAAACGCAGCAGCCAAATGCATCTCTCTGTCACTTGGAACGTGGCTTCTGTAGGAATCGGGGTGGGGGTGAACACCCAGGACAAGCCCCTCGGTGGCGTGCCTGTCCTCGCCAGTCCGTGACCCAGGCCAGTCAGTGTTGGACTCAGGCCGAACGCTGTTCGGTGTCTCATCCACTTGGAAATGAGCCAGTCTTTGTTTTTTTGCGAGGTCGATTGACCGAGAGCATATTTCTTCTCAGTTGTAAATAGTTCCATGTTTTTGTTTTACTGGTAGGTGGAGGGGAGGGTGGGAATATAAATTCGTTGCATGAGACCTGTAGTAGAAGCATGTTCCCTCTGACAGGGCATTGTGGTGAACATAAGCACCTTGGTAACTAAATCCCTTTAGGTAGGTATAAAGGTTTTAGTTCTGTATTACGTTACTGTAAAAGCTTAGGTTTATTTTTGTAGGACTTCATGGCTAAGAATTAGAGCATAGCAATGGGGTTGCTCTGTTGGAGTAATGTAAACTTGTAATTATAAATAAACACGCAAACCTTTAAAACTCTTCTTGCTCTAG EMBV3_34903 CAAAGTTCCATAGGTCAAGCCGAAAGTTATGGGAAATCCCGGGGTGGCTGTCCGCTAGTA Gene BVV0102_087710 + 0 NULL GK000026.2:11536672-11812675 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18850 GGCCATTGGTCCTTCCCGTTGCGCCTGCTGGTTGCTCAGTTTCCTAATGAATATCTATGT Gene GeneID:100139097|BOSTAUV1R427:XM_002695464:153_cdna Constitutive 0 NULL GeneID:100139097 18 GENE BOSTAUV1R427 NULL vomeronasal 1 receptor bosTauV1R427 EMBV3_11094 CAGAGAAGCTGCTCAGCCGGAAGGACAGTGTCTTTGCCTCTTTTGTCCGTGCTGACAAGT Gene GeneID:538996|ABCC8:XM_002693040:307_cdna Constitutive 0 NULL GeneID:538996 15 GENE ABCC8 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 8 EMBV3_40538 CAGTTAGTTAAGTTGCGCTGATGACCTTTGTAGACCAGGCACCCTGACACAGGATAGTGC Gene GeneID:534284|SETX:XM_002691649:371_cdna UTR3_Alt 2 NULL GeneID:534284 11 GENE SETX NULL senataxin EMBV3_28600 CACGGTGGAAGAGGATGTTTCTCCTTGTAGCACGTGAGAGCAATAGATGGTGAGCCCTGT Gene GeneID:517111|RDX:NM_001075749:8_cdna UTR3_Alt 3 NULL GeneID:517111 15 GENE RDX NULL radixin EMBV3_43788 GTCCAACCCCACCCACGGCAAGGAAACTCCACAATAAAGAGAACTCCACAAACTGCCAGA Gene BVV0102_294838 + 0 NULL GK000006.2:52148867-52435879 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089138 TCONS_00017462 TCONS_00037791 TCONS_00160965 TCONS_00156835 TCONS_00006151 TCONS_00244653 TCONS_00200007 TCONS_00130259 TCONS_00148196 TCONS_00244651 TCONS_00244654 TCONS_00161953 TCONS_00210172 TCONS_00156829 TCONS_00249264 14 XLOC_053924 XLOC_009039 XLOC_021620 XLOC_097858 XLOC_095295 XLOC_001714 XLOC_150512 XLOC_121659 XLOC_078970 XLOC_090079 XLOC_098837 XLOC_128682 XLOC_095289 XLOC_152207 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_37770 CATTGTCACAGAGAGCCTCAACACCAGCCAGTGGCTCCATCTCCAACATGTATGCAGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24153 TTGGATATGACTTTGCCACCCACTTTCAGTCCTGCGGTGTTTCGGGTGGTGGTTGCTTGT Gene BVT0102_420544 - 1 EMBV3_12890 GK000018.2:25555199-25580586 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02052 GGCTATAACACCCCATCACACCCCTAGAACAAAATCTCCATACAGAGAGGCTTGTGAGTG Gene GeneID:512227|ACSM2A:NM_001101952:338_cdna UTR3_Alt 2 NULL GeneID:512227 25 GENE ACSM2A ACSM2B MGC179444 acyl-CoA synthetase medium-chain family member 2A EMBV3_24304 ATGAATGCAAAGTCCGGAAGACAGAGAAAGCAAGCATGGGACAGGTCGAGCCGGAATCTG Gene BVT0102_107260 - 0 NULL GK000012.2:28794299-29241245 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036647 TCONS_00036645 TCONS_00036644 1 XLOC_021191 Coding TCONS_00036647 XLOC_021191 NonCoding Coding - 12:29095340-29098852 - TSS26624 740 1 TCONS_00036647_3 122 3 0.790088293933352 0 2.35744238558984e-177 0.000590298466974023 0.000104510355939911 0.000231973525524648 6.69377648160161e-05 6.37889918506007e-05 0 0.00080673057276658 2.57767705362794e-35 3.30397622123536e-22 5.72360604695857e-12 1.59365003055275e-05 4.70915081240771e-16 0.00028897877035513 0 2.18791184149276e-20 4.56743506026557e-38 1.42784806458898e-299 0.00082293670386288 0.00290354680656238 2.71890706054142e-14 6.33955811214799e-24 0 0.00160435775127209 2.99625120416454e-05 0.000575191024873537 8.23593031213592e-24 2.28142083709802e-20 5.47575148799758e-21 XM_005213585.1 FRY PREDICTED: Bos taurus furry homolog (Drosophila) (FRY), transcript 0.0 917 99.81 0.690540540540541 NR_027062.1 EEF1DP3 Homo sapiens eukaryotic translation elongation factor 1 delta pseudogene 3 (EEF1DP3), non-coding RNA. 6e-59 232 90.12 0.227027027027027 0 noncoding 0 0 0 0 0.0391488222640565 0.710655553301952 0.00446247498426044 0.940740452199304 GTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACACCCAGGAGGAGCAGGGGAGAGGAAACCCAGCCCTGGGACATGAGAGGATAAATGGTAGAACTATGAGTTCTGCAGAGTCAGAGAAAAGAGGGCAGAGCCTTTCCACATAAATGGAGCAAGGGGGAAGGGAACAAAGGATGTATGAATGCAAAGTCCGGAAGACAGAGAAAGCAAGCATGGGACAGGTCGAGCCGGAATCTGGTGAATGCTGCTTTTTCTCAGACCACCAAACCAGTTGGCCACGTTAGTTGCGAGCCAGGCGGGATCCCGGCAGAGACCTCAGGGTCCTTTCCACTGGCTGAGTGGAGAGTGCCATCTGTGGACGAAGAACAAACTAAATTCATCACAAAATGATTATAAATCAAGACGGAGCAGCCTGCCACCTGAATTACTCATAGGAAATGATATTAAAGCAAGACTTCAAAGAAACTTTAGAAACTTGGAACCCATTCACCTGAGGCGCCCAAAAAAGAGACCATCCATATTTCCAGTTCTGCTGCCATTCCCCACCTTGGGGACAGCAAGAGGGGATGAACTCTTAACAGCCTCCCTGTGTGCCACGGTATCCAGGTGACAAGGTGGAGAGTTACCTGCCTGAAGTTTGAACAATGCTGGCTACTTCTTTTTTGTCTACATTCAATTTCAAATAAACCACAACTTCACT TCONS_00036636 TCONS_00036638 TCONS_00036639 s 3' 1985 TCONS_00036639 s 5' 0 EMBV3_18430 ACTGCTCAGGGGAAAAGCCCCCAGGCTCACAGGTTCTTTCTGCTGCACCTGTTGGATATT Gene GeneID:100138674|BOSTAUV1R432:XM_002695457:125_cdna Constitutive 0 NULL GeneID:100138674 18 GENE BOSTAUV1R432 NULL vomeronasal 1 receptor bosTauV1R432 EMBV3_43775 TCTCCAAACGCCTCAGGAGGCTTGACTCCCTTTCGTCCACTCTGTGAGCTCCAAGAGATA Gene BVT0102_414673 + 1 EMBV3_33596 GK000004.2:1-407813 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00063810 TCONS_00178732 TCONS_00218950 TCONS_00123275 TCONS_00063805 TCONS_00230831 TCONS_00117596 TCONS_00167122 TCONS_00230834 TCONS_00186490 TCONS_00098199 TCONS_00240374 TCONS_00162739 TCONS_00098198 TCONS_00185573 TCONS_00222139 TCONS_00149043 TCONS_00161424 TCONS_00116087 TCONS_00101341 TCONS_00088422 TCONS_00106013 TCONS_00238290 TCONS_00178733 TCONS_00080098 TCONS_00048460 TCONS_00006023 TCONS_00238291 TCONS_00223049 TCONS_00231769 TCONS_00217532 TCONS_00033186 TCONS_00230833 TCONS_00011614 TCONS_00178734 TCONS_00162571 TCONS_00142474 TCONS_00230354 TCONS_00010832 TCONS_00168478 TCONS_00142472 TCONS_00129561 TCONS_00157807 TCONS_00231774 TCONS_00066112 TCONS_00176791 TCONS_00071703 TCONS_00238280 TCONS_00131535 TCONS_00011615 TCONS_00232767 TCONS_00162567 TCONS_00098201 TCONS_00162570 TCONS_00158314 TCONS_00071451 TCONS_00186834 TCONS_00154284 TCONS_00033205 TCONS_00230832 TCONS_00231776 TCONS_00063811 TCONS_00212984 TCONS_00222175 65 XLOC_090921 XLOC_038536 XLOC_108505 XLOC_132269 XLOC_074829 XLOC_038531 XLOC_140321 XLOC_071762 XLOC_101958 XLOC_140324 XLOC_112542 XLOC_058445 XLOC_147038 XLOC_099620 XLOC_058444 XLOC_111626 XLOC_135448 XLOC_090920 XLOC_098315 XLOC_070256 XLOC_061582 XLOC_053209 XLOC_062697 XLOC_144957 XLOC_108506 XLOC_048982 XLOC_028592 XLOC_001586 XLOC_144958 XLOC_136355 XLOC_141257 XLOC_131531 XLOC_019420 XLOC_140323 XLOC_007165 XLOC_108507 XLOC_099452 XLOC_086899 XLOC_139844 XLOC_006383 XLOC_103118 XLOC_086897 XLOC_078274 XLOC_096262 XLOC_141262 XLOC_040830 XLOC_106565 XLOC_043473 XLOC_144947 XLOC_080240 XLOC_007166 XLOC_142251 XLOC_099448 XLOC_058447 XLOC_099451 XLOC_096768 XLOC_043222 XLOC_112885 XLOC_094044 XLOC_019439 XLOC_140322 XLOC_141264 XLOC_038537 XLOC_130301 XLOC_135484 Coding TCONS_00080098 XLOC_048982 NonCoding NonCoding - 17:37120691-37121809 - TSS60038 1118 1 TCONS_00080098_2 78 1 0 4.78753310707479e-05 9.4932339466094e-06 3.43843363013195e-05 6.06723695704804e-05 9.08988479709594e-05 6.51622043694459e-05 5.11705138933887e-05 0.000183253491462736 0.000182535013518509 6.81731190344836e-05 6.83946942535167e-05 9.87829255393725e-05 2.67502466787108e-05 0.000166312604361232 0.000148086674799101 0.00241017982236107 0.000337250628166226 0.00122244424164627 9.19664755724166e-06 7.06056940996818e-05 1.47837106007788e-05 0.000312153434511185 0.000488458609486617 0.000555318184846704 2.63112376039151e-05 3.96200823018996e-05 2.60508865532784e-05 6.2278174362547e-05 0.000192546472292626 0.000120648690903383 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 3e-39 167 74.63 0.237924865831843 0 noncoding 1 1 1 1 -0.069690739815313 0.656150057551822 -1.10078665842033 0.00368417958290911 GCCGTCGTACCTCGCGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACACCAGAGCCTCCCCCGTCATCGCGACTTGAGGGCCTTCGTCTCCTGTATGGCCTAGAGACCAGTCTCTCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCAAGAGCAGAGCGGAGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAATGCAACCCCGAGATCCCTTTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTGGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCAACACAAGAGGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCTGCAACTCGAGAAAATCCACGTGGTTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGTGTCTCAGGAGAAGTCCCACGTTAGGTATTGGAGGTCGAAAAAGGGACTTGGCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTGACGGTTAAAGAGGAACACCGAGGTTTTCCCGAACCACTTCCTCTGAGCACCCTTCTGCCCTCCTGATCTCGACAGGAGGGTCGACTCCGCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTAGCCTCGTGGGTGCTTCCACATTGTGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCACCCTGTGAATGAAGTCAACACGAAGGGGCAGTCACTCGTCCATGTATCGTCCGGAAAAACCCCCAGGTTCCAAATACTTCTCTATTAGTGGCCTCTCTCCCCGGGGAGACCTCTAGAGATAAGCGGAGTTCCATGCCACAACCCAAGACGAGGCCTGACTCTCCTGTTCCCAGTCTGCAGGGACCCTGCGATCAGAGTCTGAAATCAAAGGAACCCGGACGTTCCTGCCTCTCCTGGAGAT TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 EMBV3_24012 TGCAGGACAGAAATGACTTCGCATTCCCACAGGATGCGCTGGGTAGCAGCCAGTTGCAAA Gene GeneID:783912|LOC783912:XM_002689533:184_cdna Constitutive 0 NULL GeneID:783912 8 GENE LOC783912 NULL similar to interferon alpha H EMBV3_14910 AAGGTGGTAAAGATGATGGCAGAGGAAGGGCCAGGGAGGCAGCAGACAAGGCTTAAATGA Gene BVT0102_347184 + 0 NULL GK000016.2:30160575-30175521 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00072082 1 XLOC_043851 NonCoding TCONS_00072082 XLOC_043851 NonCoding NonCoding - 16:30165156-30166060 - TSS53926 904 2 TCONS_00072082_1 78 0.206858407079646 1 0 0 0.000255657052746914 3.07102056074645e-05 0 8.73836736691657e-05 0 0 0.00073934006277504 8.72801730720344e-05 0 2.53228475443909e-06 0 0 0 0 0 0 0 5.55270900029478e-05 0 0 0.000123130531905306 2.02965625132657e-05 0.000203994318660592 0 3.89682427000976e-05 0 0 0 0.000545358601657991 XM_005213558.1 HMGB1 PREDICTED: Bos taurus high mobility group box 1 (HMGB1), transcript 2e-53 214 73.37 0.378318584070796 NM_002128.4 HMGB1 Homo sapiens high mobility group box 1 (HMGB1), mRNA. 9e-52 208 72.92 0.383849557522124 0 noncoding 0 0 0 0 0.0823346434173594 0.605467377572454 0.0811268866173111 0.223180462878094 AGCCTTCCTTTGGCTCAGGATGCAGCAAGATCCTTTCGGTACTTTTCCTGCCACAGTGCAGACTCCTTTTCAGGCTGCCTGCCATCTGCAGCACTGTCTCTCACATCTCTCCCGGTTTCTTTGCATCATTGCCACTAGACGGACCAGGATCCTCTTTGGTTTTGGGGTGGTACACCAAACACAAGAAACTGGCCAAAGGAGGCTTTTTGGGTGGTTGGAAACCCTGAACTTTTTGTTTCCATTTTGGGAGGAATAAAAGTTTTCATATCTGTTTGATAAGGGGCCTTGTCCACTCTTGACTTTTTCCTTTCTCTTCGTCAGACAAGGCTTTCCACATTTCTGAGCATTTTATAAGATTTTTTTTTTTTTTCCCCTTGGTGTGGACCATTTTTAAAGTCTTTATTGAATTTGTTACAATATTGCTTCTGTTTTATGTTTTGGTTTCTTGGGCAATAAGCCATGTGGGATCTTAGCTCCCCAACCAGGGATCCAACCTGTACCCCCTGCATTGGAAGGTGAAGTCTTAACTTGACTGCCAGGGAGTCCCCTTTCTGAGCATTTAAAGAATAACTTGAGAATGACTGAAGCATCTGGATGGATTTTCCTGGGCTCCTTCTGGCAAGTTTATGCAAAGAGCCTATGACGACATTTGACCTCAGGCTTCTCAGGGCCTCCTCTGCCCTGCCTCAGGGAGGCAGAGTCGCTCAGCGCCCCTCGCTCTCACTTGCCTCAGCAGTGTTTCTGGGGGTTTCTGAGTCCCAGTTTTCACATAAGCGCATGAGCCTGAAAGGCCTAGTGACAGCTCATTCCTTGGTCATTTAAGCCTTGTCTGCTGCCTCCCTGGCCCTTCCTCTGCCATCATCTTTACCACCTTGCCCCTCAGTGTTATTCTGCTCACCCTCTT TCONS_00068975 . 3' 964 TCONS_00068975 . 3' 1867 EMBV3_36099 GACAATGTGGTGAATGACCTGAAGGACAAAGCCAAAGAGACTGCAGACACCATCTCCAAG Gene GeneID:617543|REEP5:NM_001046605:57_cdna UTR3_Alt 2 NULL GeneID:617543 10 GENE REEP5 MGC137184 receptor accessory protein 5 EMBV3_16502 ACAGGACCGAGATTAAGTGTCAAACCAAGGAAATTCTCAGGATAGCGTGTACCTCCAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29382 GCTCAGTGGTAAAGAATCTGCTTGCACTGTAGAAGATGCAGGAGATACAGGTTGGGACCC Gene BVV0102_110979 + 0 NULL GK000001.2:88410921-88482653 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004504 1 XLOC_001049 Coding TCONS_00004504 XLOC_001049 Coding Coding ZNF639 1:88404051-88417483 j TSS2244 3315 1 TCONS_00004504_2 485 0.129411764705882 7 0.753704117340481 0.00027382430114331 0.000884854372695802 0.000276025717164664 0.000104436231662854 0.00030268425262489 3.74664854718372e-05 8.04178313437942e-05 9.1024292799533e-05 0.000109616039592887 0.000152819634266263 7.41658234234981e-07 2.70257023302907e-14 8.16520558301724e-06 1.85594516313032e-06 1.21421942845399e-58 0.000491605508240737 4.41138851155917e-12 0.00194011499798242 0.000411306522881769 0.000702202483680259 8.63408053724921e-05 1.09588862459892e-05 3.73962466123857e-05 0.000220047487982515 0.000336640096054818 0.000457104988357568 0.00054941016382651 3.15168316854558e-05 5.05960331574665e-05 3.05215842607973e-05 XM_005201641.1 ZNF639 PREDICTED: Bos taurus zinc finger protein 639 (ZNF639), transcript 0.0 3622 100.00 0.605429864253394 NM_016331.1 ZNF639 Homo sapiens zinc finger protein 639 (ZNF639), mRNA. 0.0 2693 90.60 0.586726998491704 TCONS_00004504_2 sp|A5PK30|ZN639_BOVIN ZN639_BOVIN Zinc finger protein 639; 0.0 1002 100.00 0.997938144329897 4 coding 0 0 0 0 -0.0323533348682774 0.770176184660236 0.0217462518404097 0.692375994308085 CAGTACAACCTAGGGACAAGAGTGATTTGAGGCAGTTTATCTCTAAGCAAAGTGATAAAGCAAAGACTGACACTAAATGGGACGTGTGGGGATCTTCCTGACCCAGGGTCCCAACCTGTATCTCCTGCATCTTCTACAGTGCAAGCAGATTCTTTACCACTGAGCCACCTGACATATTTCACCATCTGTGAAAACTTCCCTGTAATTCAGTTTTCCTCACTCCAGTATTAAGAATTACACCAAATTAAAAAGATATGAATGAATATCCTAAAAAAAGAAAAAGGAAGACTTTACATCCTTCTCGTTATTCAGATTCCTCTGGAATAAGCAGAATTGCAGATGGATTCAATGGAATTTTTTCTGATCATTGTTACAGTGTTTGTTCTATGAGACAACCAGACTTAAAATATTTTGACAACAAAGATGATGATTCTGATACAGAGACATCAAATGAATTGCCAAAATTTACAGATGGAATCAAAGCCAGAAACAGAAATCAAAACTACTTGGTTCCCAGTCCTGTACTTAGAATTCTAGACCACACTGCCTTTCCTACAGAAAAATCTGCTGATATTGAAATTTGTGATGAAGACTGTGACTCCCCTGAATCAGTCCACCAGCAAACCCAAGAGGAGAGCCCCATAGAAGTTCACACTGCTGAAGATGTTCCAATTGCCGCAGAAGTGCATGCAATTTCTGAAGACTATGATATAGAGACAGAAAACAATTCCTCTGAGAGTCTCCAAGACCAAACTGATGAAGAGCCACCAGCTAAACTTTGCAAAATTGTTGACAAGAGCCAAGCTTTGAATGTGACTGCCCAGCAGAAATGGCCTTTACTGAGAGCTAATAGCAGTGGCCTCTATAAATGTGAACTTTGTGAGTTCAACAGCAAATATTTTTCTGATTTAAAGCAGCATATGATCTTGAAGCACAAGCGTACTGATTCAAACGTGTGTCGAGTATGCAAAGAGAGTTTCTCTACCAACATGCTTCTGATTGAACATGCCAAACTCCATGAAGAGGACCCCTACATATGTAAATACTGTGATTATAAGACTGTAATTTTTGAGAACCTCAGCCAGCACATTGCAGACACCCATTTTAGTGATCACCTTTATTGGTGTGAGCAATGTGACGTTCAGTTCTCCTCAAGCAGTGAACTCTACCTACATTTCCAGGAGCACAGCTGCGATGAACAGTACTTGTGTCAGTTCTGTGAACATGAAACGAATGATCCAGAAGACTTGCATAGCCATGTGGTAAATGAGCATGCATGTAAATTAATAGAGTTAAGTGATAAGTATAACAATGGAGAACATGGACAGTATAGCCTCTTAAGCAAAATCACATTTGACAAATGTAAAAACTTCTTTGTTTGTCAAGTATGTGGGTTTCGGAGTAGACTTCATACAAATGTTAACAGACATGTTGCTATTGAACATACTAAAATTTTTCCTCATGTTTGTGATGACTGTGGGAAAGGCTTCTCAAGTATGCTAGAATATTGCAAACATTTAAATTCACATTTATCTGAAGGGATTTATTTATGCCAATACTGTGAATATTCAACAGGACAGATTGAAGATCTTAAAATTCATCTAGATTTCAAGCATTCGGCTGATTTACCTCATAAATGTAGTGACTGCCTGATGAGGTTTGGAAATGAAAGGGAATTAATAAGTCACCTTCCAGTCCATGAAACAACTTGATTATTCTCTTTAACTTCCATAATGTTGATTTGAAATAATAAATTCAACTATTTTGAAAATGTTAAAATGGATGATTTTAAACACAACTTGTGAGAATTGTCTTTAACAAGATCTTTTTAATTGCCCATTTTCTTGGCATTGCTGCCTTTTCAGTATATAGTTGTATCCTAAATGTGGTATTTTCAATGCATTCGTAGTTTTAACCACTTTGGGTGACTGTCATCGTGTTTCTTGCATGTGCTCTGATTTTGTTGATAGGAAACATACACTAAAGAAACTATAGTTTTCCTTCCATAAATACAGGTGTTACAGACTTTTTCTTCTTTAAACTCAAAACAAGATCAATCTTTCATGGATGAAGTCATTAAAGTACTGCACTTCCAGAGCTAAAGTGCTGCATAATGCACAGTTAAGTCCACTGATAATCCCGTTAACAAGATCCAGACCCTGCTTTTGCATTCCCCAGTAGTTCCTATCCCCAAGACAGTGGACTCTCCATCTGTGTGAGTCTTTCAGTGACACTAGGAGCCCCGTGTTACGGTAAGAGGGAAAGATGTGATTTTCTTGGCAATCTTTTTTTTTTTTGTAATCCTTATTTTAGCCCCTATCCATGTGCTAAATAATCTTAGATGGGGAGGAACTGATAAAGGGGTTAAACGATAAAGGACATTTCATAACTCATTTATAAATGAAGTAGGTCATTTATAATCTGTTCATATTTCATTTTCAGTTATGCAATTGCAAAGTCATGCCTGAACTTCTGATACCAAATCATTTGTTTTCTGAGAAAACCCACTGAAGTATTAGAAATAGGAAGGTATGAGAGGTTGGGGTTGCTGTTATGAGAAAGTATAAATTACTTTTGATAATGGTAAATCAGTCTTAGCATCTGTATTTTCTGTGGCTGCCATAACAAATTATCACAAACTGAGTGGCTTAAAAAGTAGAAGTTTATTGTCTCACAGTTGTAGAGGCTAGAAATTCAAAATTGAAATGTTAGCATAGTTGGTTCCATCCAAGAGCTATAAAGGAAGAATCTGTTCTCGGCTACTCTCCTTGACTTATATATGGTCATCTTCACGTTCACATGGTCTCCCTGTGTCCAAGTCTGTCTCCTTTTTACAAGGAACCAAGCAGTCATTGGATTAAGGCCTACCTTGCCAAGCTCATTTTAACCTAATAAAGACACTATCCCCAAATAAGGTCATATTCCATTACTTCAACATATGAACTGGGGAGACTGAGGGAGACACAACCACCACAATTCAGTAACAGCTTCTTGAGTACTATCAAGAAAATGGTATTTTGTGCATCATTGGCCTCAAATATAATAAACATTGCTGCTAGCAAACTATTTGTCACTCAGGAATATTAATATAGTTGAAAAGACTGGTTTATGACCTATGGTTTTCTCATAGGACCCATTGGAGTTTATTCTGTTTTGTAAATAGTGACAGCAATAAGTTTTTCAAAACCATTTTTATTTCCACCCTTTTGTCATATATGCATACTTGTATTTCTAGAAATTACCATTCCATCTGATTATAACATTCCAGGTAGGGCTGTCTGATAAAAACATTTCTTACAAGACTTAAAATTGTAA EMBV3_22038 CCTCCATCCCCTTGTCTTCTGCTTGACCTTGGGAAATCTTATGTGCATCGCTGTGTATTA Gene GeneID:540426|MSN:NM_001046477:121_cdna UTR3_Alt 2 NULL GeneID:540426 X GENE MSN MGC137877 moesin EMBV3_01240 TACTGCCAAAAGGTATGTGATCTTTGAGGTCACGGTGGAAAATACCCTTTCTTTGAGAGC Gene GeneID:768043|MGC137725:XM_002695320:12_cdna Constitutive 0 NULL GeneID:768043 18 GENE MGC137725 NULL hypothetical protein MGC137725 EMBV3_43181 ATGAAAGGAGACTACTACCGCTACTTGGCTGAGGTTGCAGCTGGTGATGACAAGAAAGGG Gene GeneID:287022|YWHAZ:NM_174814:12_cdna Constitutive 0 NULL GeneID:287022 14 GENE YWHAZ NULL tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide EMBV3_11548 CCAAGCTATTGGCAGGAGTTTACATACCTGAGGCCGGCATTGTAGGGACCATGGCTTCAA Gene GeneID:510906|DDIT4L:NM_001081519:5_cdna UTR3_Alt 1 NULL GeneID:510906 6 GENE DDIT4L MGC155271 DNA-damage-inducible transcript 4-like EMBV3_42418 ACATGCTGTCCATCGCTGTGACCTACTTCATCACGCTGTGCCTGTTCCCGGGTCTCGAGT Gene GeneID:618620|SLC29A4:XM_002698162:632_cdna Constitutive 0 NULL GeneID:618620 25 GENE SLC29A4 NULL solute carrier family 29 (nucleoside transporters), member 4 EMBV3_32662 CTTTTACATCTCTTAGCATGGAGGACGAAGAAAGGCTGTACATTGTTGCTTGAGAGTCTG Gene GeneID:493638|PTGES3:NM_001007806:932_cdna UTR3_Alt 3 NULL GeneID:493638 5 GENE PTGES3 CPGES MGC127581 prostaglandin E synthase 3 (cytosolic) EMBV3_21032 TTGGACCTGGCAGACACATTGTACACCAAGATGAAGCCCAGGAAGCAGAAGCTATTCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05887 CCATTCACTCGTTGCTTTGAAGACAGTTCAGAATCAGAGACTCTTAATGGGTCTAGGGAC Gene GeneID:510456|LOC510456:XM_002689653:47_cdna Constitutive 0 NULL GeneID:510456 8 GENE LOC510456 NULL similar to Nicotinamide riboside kinase 1 EMBV3_37848 TGGGCATCAAGGTAAAGATCATGCTGCCTTGGGACCCGACTGGTAAGATTGGCCCTAAGA Gene GeneID:326588|RPS3:NM_001034047:13_cdna Constitutive 0 NULL GeneID:326588 15 GENE RPS3 MGC127206 ribosomal protein S3 EMBV3_31199 GCAATGGACACTTATATGAAACTAAATGGAACATAGGGGTGACACGGGGGTGTTGCCGGC Gene BVT0102_075701 + 1 EMBV3_19431 GK000012.2:31952373-32082250 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29960 CAAGCAAAATGAGAAGGAAAAACCCCAGTCTAACGTCCCTCCAGCAGTGCCATCACTTCC Gene GeneID:281682|CFDP1:NM_174268:58_cdna Constitutive 0 NULL GeneID:281682 18 GENE CFDP1 BCNT craniofacial development protein 1 EMBV3_28787 CTATGTAAAGTGAACGTGAAATCACTCAGTCGTGTCCAACTCTTTGTGACCTGTGGACTG Gene GeneID:618814|PTPLAD2:NM_001076522:96_cdna UTR3_Alt 2 NULL GeneID:618814 8 GENE PTPLAD2 MGC142592 protein tyrosine phosphatase-like A domain containing 2 EMBV3_14579 ACCCATGACCGAGGTGCCTCTGGAGCTGCTGGAAAAACAAACTCCAGAAGTCCTGTACTT Variant GeneID:507185|OSTBETA:NM_001077867:86_cdna 229^375 1 EMBV3_04809 GeneID:507185 10 GENE OSTBETA MGC148361 OSTB organic solute transporter beta EMBV3_07332 AACAGTTTGACTTGCCCCTCACAGTGATGTCCTCAACAGAAGATGATGGGAGACGAGCCC Gene GeneID:506996|USP43:XM_002695882:397_cdna UTR3_Alt 2 NULL GeneID:506996 19 GENE USP43 NULL ubiquitin specific peptidase 43 EMBV3_15259 TCTCAAACAAAGAGGCGAGCAGTGGCTCCGGGCCAAAATCTATGCAAGACGGCTGGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12244 GGGCCCCTACATCACCTCTGTTCAGGGCATAAAGGCCAGCAATAATGACAGAACCTACTG Gene GeneID:616239|TCN1:XM_002693815:66_cdna Constitutive 0 NULL GeneID:616239 15 GENE TCN1 NULL transcobalamin I (vitamin B12 binding protein, R binder family) EMBV3_38680 ATCTGGTCAAGGTCTGGGATTACAATGAGGGTGAAGTGACCCATGTTGGGGTGGGACACA Gene GeneID:505885|WDR16:XM_002695880:392_cdna Constitutive 0 NULL GeneID:505885 19 GENE WDR16 NULL WD repeat domain 16 EMBV3_19144 CAGCTGATTTCTCTGATAGCTGGCAGGTCAGAAGGGAGTGACATGATATATCCAAAGTCC Gene BVV0101_068384 + 1 EMBV3_08300 GK000004.2:45475481-45594204 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187173 1 XLOC_113221 NonCoding TCONS_00187173 XLOC_113221 NonCoding NonCoding - 4:45584799-45585768 - TSS139541 969 1 TCONS_00187173_1 76 0.953560371517028 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00027256572877591 0 2.58935960009622e-05 0 0 0 9.95548769743547e-05 0 0 0 0 0 0 5.00991581850327e-06 0 XR_229369.1 LOC100848246 PREDICTED: Bos taurus uncharacterized LOC100848246 (LOC100848246), 3e-46 190 71.06 0.470588235294118 0 noncoding 0 0 0 0 -0.0999299876242494 0.555835849758017 -0.0230948719419999 0.632047903244333 CTTGCCTTTCTAAGTGGGATTTTCCCTTTCCTGTAGATTCTTCTTTTCCACTTAGAGGAGACTCTTTAACATTTCTTTTAGGGTAGGTTTCCTACTGATGAACTGTTTCAGTTTTTGCTTGTCTGAGAAGTTTCTTACCTCTCCTTTGATTCCAGATGCTAATCTTGCTGGATAGAATATTTTAGGTTGCAGACTTTTTCCCTTTCAGGACTTTGGATATATCATGTCACTCCCTTCTGACCTGCCAGCTATCAGAGAAATCAGCTGATAGCCTTTTGGGGATTCTTGTACACAACACTTTTTCTCTTGCGGCCTTTAGAATTCTTTATTTTAAATTTTTATCATTTTAATTGTGATGTCGTCTTTTGAGCGTGGGTTCATTTCGTTTGGGACTCCTGTGTTTCCTGTACCTAGATATGTTTCCTTGTTTAGGCGTTGGAAGCTTTCAGCCATAATTTCAATAACTATATATTCAACCACTTTCTTTCCCTTCTGGGACCCCAATAATGTAAATATTACTGTGTTGTCCCAGAGATCCCTTCAGCCATTCTCATTTTCCATACTGTTTTCATTTTGGCTGTTCTGAGTGATTTCCATTATTCTATTTTCCAGGATCACTTATGCATTCTCTGTATCACCTAATGTGTAGTTAATTCCTTCTAATGTGTTTTTCATCTTAGTTATTGTATTCTTCAGCTCTGTTACTTTTTAAAATGTATTTTATAGTGCCTTGTTAAGATTTTCACTGCATTCTTCTTTTCTTAATCTCTTTGGCATTCTTATTACTAATGCTTTGATATATGGTAAGTTGTATACTTCCGTTTCTTTTTTTCAGGGGCTTTCTCTTGCTCTGTCACCAGAAACAAAGTCCTCTGTATTCTCATTTTGCTTAACTTTCTCTGTATCTATGGAATTAGGTGAAACAGTTACCTATTGTAGTCTTGAAGGAGTGTCCTTGTGTGGGAACAA TCONS_00183833 TCONS_00183834 TCONS_00183835 TCONS_00183836 TCONS_00183837 TCONS_00183838 . 3' 8431 TCONS_00183833 TCONS_00183834 TCONS_00183835 TCONS_00183836 TCONS_00183837 TCONS_00183838 . 3' 9399 EMBV3_28564 AAGAGATGGCCATCAGTGACTGCAGCAAAGAGATTACCTAAGCAGATTGAAGAACGCAAT Variant GeneID:504602|TTC1:NM_001034217:10_cdna 639^787 2 EMBV3_34035 GeneID:504602 7 GENE TTC1 MGC128644 tetratricopeptide repeat domain 1 EMBV3_12409 GGATAAAGCCCCGCTACCATAGTCCATGGATTTACTTACACGCTGTTTGACTAGCAGTGC Gene BVV0102_129508 + 0 NULL GK000015.2:35935115-35943264 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058948 TCONS_00058949 TCONS_00058954 TCONS_00058952 TCONS_00058950 1 XLOC_036232 Coding TCONS_00058950 XLOC_036232 Coding Coding PIK3C2A 15:35831161-35937985 j TSS44314 8288 1 TCONS_00058950_7 1693 0.0109797297297297 34 0.922731995918482 0.000635924784745468 0.00050242989582068 0.000317430174630083 0.000197916120957905 0.000488302242795838 0.000427888467131378 8.20217493840887e-05 0.000674919218127393 0.000127989891032979 0.000356986305132822 0.000194846131089765 0.000172280344458784 1.92450531454485e-05 4.6002127127854e-09 9.89800624539351e-05 0.00246054980490349 0.00301455083361327 0.00292512148632423 0.000418888505509966 0.000822811428407437 1.99927144192774e-05 0.00203186146373406 0.00187126326863849 0.00478059112786992 0.000131445772994182 0.000398082116600211 0.000235414535925773 0.000541206140535135 0.000366341000773848 0.000845571078986718 XM_002693094.2 PIK3C2A PREDICTED: Bos taurus phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha (PIK3C2A), mRNA. 0.0 7564 100.00 0.505912162162162 XM_005252977.1 PIK3C2A PREDICTED: Homo sapiens phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha (PIK3C2A), transcript variant X1, 0.0 5979 91.42 0.509531853281853 TCONS_00058950_7 sp|O00443|P3C2A_HUMAN P3C2A_HUMAN Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha; 0.0 3167 90.21 0.999409332545777 6 coding 0 0 0 0 0.0215459220182362 0.85782797063967 -0.0261211763872536 0.652551229969254 GTGCGGAAGGCGGTGCTTTCCCGACCGGAAGTGACGTCTATGCTTGGCTGGCCGCGGTGTCCGCCGAAGCTCTCGGCAGCGGCTGAGGCGACTGAGTGGAAAATGGCTCGGATTTTTGCGGCTGTGGCGCCTTGGGTTGTGGTGGAGGCAGAGGCTCAGGCAGCGTGAGGTCTTGCTATTTTGGAAACTACAAGAGAAAACTAGATTGGGGAGGTTTGGATTGGTAAGTGGACATGGCTCAGATATCCAGCAACAATGGATTTAAGAAATGCTCATCTTCCCCTCCGGAATCAACAAGAACAAGGGATGTGGACAAAGAAGAAGCATTACAAATGGAAGCAGAGGCTTTAGCAAAACTGCAAAAGGACAGACAGGTGACTGATAATCAGAGAGGCTTTGAGTTGTCTAGCAGCACTGGACAAAAAGCACAGGTTTATAATAAACAGGATTATGATCTCATGGTGTTTCCTGAATCAGATACCCAAAAAAGAGCAGTAGATATTGATGTAGAAAAGCTTACCCAAGCTGAACTTGAGAAACTATTGCTGGATGACAGTTTTGAGACTAGGAAAACACCTATATTGCCAGTTACTCCTGTTCTGAACCCTGCATTATCAGCACAACTGTATCTTAGACCTGCTGTTCAGAGAGGACAGTGGCCACCTGGATTATCTGGACCTTCCAGTTACACTTTACCTTCTATTTATCAGTCAACTTACAGTACTAAACAGACTGCATTCCAAAATGGCTTCAACCCAAGAATGCCTACTTTTGCATCCACAGAACCAATATATTTAAGACTTCCAGGACAGTCTCCATATTTTTCATATCCTTTGACACCTGCCACACCCTTTCATCCACAAGGAAGCTTACCTATCTATCGCCCAGTCATCAGTCCTGACATGGCAAAGCTGTTTGACAAAATAGCTAGCACATCAGAATTTTTAAAAAATGGAAAAGCAAGGACTGATTTGGAGATAAATTCAAAAACTACAATCAGCAATCTGCAGGTATCTCCAAAGTCTGAAGATATCAGTAAATTTGATTGGTTAGACTTGGATCCTCTAAGTAAGCCTAAGGTGGACAATGTAGAGGTAGAGGACCATGAGGAAGAGAAAAATGTACCAGATTTGCTAGCAGACGATCCCTGGGATGCTGTTCTTCTTGAGGAGAGATCACCAGCAAGTTGTCACCTTGACAGAAAGGTGAATGGAAAATCTCTTTCTGGAGCAACAGTAACAAGAAGCCAGTCTTTAAATATTCGAACAACTCAGCCTACAAAAGTCCAGAGCCAAATATATCAGAAAGACCCAAATGGGACCAGTACTTTGCCAACTGAAAGTTCTCTTCTACAAGAAATTGAAGTACAGAATGAGGAAGTAGCAGCTTTTTGTCAATCCATTACAAAATTGAAGACCAACTTTCCATATACCAATCACTGTACAAATCGGGGCTATTTGTTAAGTCCAGTCACAGTACAAAGAAACATATGTGGAGAAAATGCTAGCGTGAAGGTCTCCATTGAAATTGAAGGATTTCAGCTACCAGTTACCTTCACATGTGATGTGAGTTCTACTGTAGAAATCATTATAATGCAAGCCCTTTGTTGGGTACATGATGACTTGAATCAAGTAGATGTTGGCAGCTATGTTCTGAAAGTTTGTGGTCAAGAGGAAGTGCTACAGAATAATCATTGTCTTGGAAGCCATGAACATATTCAAAACTGTCGAAAATGGGACACAGAGATTAAACTGCAACTTTTGACCTTCAGCGCAATGTGTCAAAATCTGGCCCGAACAGCGGAAGATGATGAAACACCTGTGGATTTAAACAAACACCTGCATCAAATAGAAAAACCTTATAAAGAAGTCATGACGAGACATCCTGTTGAAGAACTTTTAGATTTGTATCACAATCAAGTGGAGTTGGCTCTTCAAATTGAAAATCAGCACAGAGCAGTAGATCAAGTAATTAAAGCTGTAAGAAAAATCTGTGGTGCTTTAGATGGCGTGGAGACTCTTGCCATTACAGAATCGGTAAAGAAGCTGAAGAGAGCAGTAAATCTTCCAAGGAGTAGAAGTGCTGAAGCAACTTCACTGTCTGGAGGAGGAGACATTAACAGGAGTTCAAGTAGGGGCTCACTGAATCCTGAAAATCCTTTTCAAGTAAGCATGGACCAGTTAACTGCGGCAATTTATGATCTTCTCAGACTCCATGCAAATTCTGGTAGAGGTTCTGTAGATTGTGCCCAAAGTAACGGGAACATTAAGGAAGCATGGACTACAACAGAACAGCTCCAGTTTACAATTTTTGCTGCTCATGGTATTTCAAGTAACTGGGTATCAAATTATGAAAAATACTACTTGGTATGTTCCCTGACTTACAATGGAAAGGATCTTTTTAAACCTATTCAATCAAAGAAGGTTGGCACTTATAAGAATTTCTTCTATCTTATTAAATGGGATGAACTAATCATTTTTCCCATCCAGATATCACAATTGCCGTTAGAATCACTTCTTCACCTTACTCTTTTTGGAATTTTAAATCAGAGCAGTGGAAGTTCCCCTGATTCTAATAAGCAGAGAAAAGGGCCAGAAGCTTTGGGCAAAGTTTCTTTACCTCTTTTTGACTTTAAACGGTTTTTAACATGTGGAACTAAGCTTCTGTATCTTTGGACTTCATCACATACAAATCTTATTCCTGGAACAGTCCCCAAAAAAGGATATGTGATGGAAAGAATAGTGTTACAGGTTGATTTTCCTTCTCCTACGTTTGATATCATTTATACCACTCCTCAAGTGGACAGAAGCATTATACAACAACACAACTTAGAAACGTTGGAGAGTGATGTGAAAGGGAGACTTCTTGATATTCTTCACAGAGACTCATCACTTGGACTTTCTAAAGAAGATAAAGCCTTTTTGTGGGAGAAGCGTTATTATTGCCTGAAACACCCAAATTGTCTTCCTAAAGTACTTGCAAGTGCCCCAAACTGGAAATGGGTTAATCTTGCCAAAACTTACTCATTGCTTCAGCAGTGGCCTCCATTGCATCCACTAACTGCCTTGGAGCTTCTTGATTCGAAATTTGCTGATCAGGAAGTGAGGTCCCTAGCTGTGACCTGGATTGAGGCCATCAGTGATGATGAGCTAACAGATCTTCTTCCACAGTTTGTGCAGGCTTTGAAATATGAAATTTACTTGAATAGTTCATTAGTGCACTTCCTTCTGTCCAGAGCGTTGGGAAATATACAGATAGCACACCATTTATATTGGCTCCTCAAGGATGCTCTGCATGATGCACAGTTTGGTGCCCGATATGAACATGTTTTGGGTGCTCTCCTCTCAGTAGGAGGAAAAGGACTCAGAGAAGAACTTTTGAAGCAGACAAAGCTTGTACAGCTTTTAGGAGGAGTAGCAGAAAAAGTAAGACAGGCTAGTGGATCAGCCAGACAGGTTATCCTCCAAAGGAGTATGGAACGAGTACAGTCCTTTTTTCTAAGAAGTAAATGCCGTCTTCCTCTCAATCCAAGTCTTGTGGCAAAAGAATTAAATATTAAGTCGTGTTCCTTCTTCAGTTCTAATGCTGTGCCCTTGAAAGTCACAATGGTGAATGCTGATCCAATGGGGGAAGAAATTAATGTCATGTTTAAGGTTGGTGAAGATCTTCGGCAAGATATGTTAGCTTTACAAATGATAAAGATTATGGACAAGATCTGGCTTAAAGAAGGACTAGATCTGAGGATGGTAATTTTCAAATGTCTCTCAACTGGCAGAGATCGAGGCATGGTGGAGCTAGTTCCTGCTTCAGATACCCTCAGGAAAATCCAAGTGGAATATGGTGTGACTGGATCCTTCAAAGATAAACCGCTTGCTGAGTGGCTGAGGAAATACAATCCTTCTGAAGAGGAATATGAAAAGGCTTCTGAGAATTTTATCTATTCTTGTGCTGGATGCTGTGTAGCCACCTATGTTTTAGGCATCTGTGATCGACACAATGACAATATAATGCTTCGAAGCACAGGACACATGTTTCATATTGACTTTGGAAAGTTTTTGGGCCACGCCCAGATGTTTGGTAGCTTCAAAAGGGATCGGGCTCCTTTTGTGCTGACCTCTGACATGGCATATGTCATTAATGGGGGTGAAAAGCCCACAATTCGTTTCCAATTGTTTGTGGACCTCTGCTGTCAAGCCTACAACTTGATAAGAAAGCAAACAAACCTCTTTCTTAACCTCCTTTCACTGACAGGGGACTTAAACAAAGGAAATGAATCTTCTCATCGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGTGCTAGTCAGTTTGCTTCCTGGTTTTTGGCCTATGGGGCAAAGGAAATCCTGACAAAACTGATTGAATCAAGTTTGGGAAGCATTGCCACAAAGTTTAACTTCTTCATTCATAACCTTGCTCAGTTGCGTTTTTCTGGTCTTCCTTCCAATGATGAGCCGATCCTTTCATTTTCACCCAAAACATACTCCTTTAGACAAGATGGTCGAATCAAAGAAGTTTCTGTTTTCACTTATCATAAGAAATACAATCCAGATAAACATTACATTTATGTAGTCCGAATTTTGAGAGATGGACAGCTTGAGCCATCATTTGTGTTCCGAACATTTGATGAGTTTCAGGAACTTCACAATAAGCTCAGTATTATTTTTCCACTTTGGAAGTTACCAGGCTTTCCTAATAGAATGGTTCTAGGGCGAACACACGTAAAAGACGTAGCAGCCAAGAGAAAAATTGAATTAAACAATTATTTACAGAGTTTGATGAGTGCGTCAATGGATGTAGCAGAGTGTGATCTTGTTTGTACCTTTTTCCACCCTTTACTTCGTGATGAGAAAGCTGAAGGAATAGCTAGGTCTGCTGATGCAGGTTCCTTCAGTCCTGCTCAAGGCCAAATAGGAGGAGCAGTGAAATTATCTCTCTCTTACCGAAATGGTACTCTCTTCATCATGGTGATGCACATCAAAGATCTTGTTACTGAAGATGGGGCTGACCCAAATCCATATGTCAAAACATACCTACTTCCAGATACCCACAAAACATCCAAACGTAAAACCAAAATCTCAAGAAAAACTAGGAATCCAACATTCAATGAAATGCTTGTGTACAGTGGATATAGCAAAGAATCCCTAAGACAGAGAGAACTTCAGCTGAGTGTACTAAGTGCAGAATCTCTGCGGGAGAACTTTTTCTTGGGTGGAATAACCCTGCCGTTGAAAGATTTCAACTTGAGCAAAGAGACGGTTAAATGGTATCAACTGACTGCAGCAACCTGTTTGTAAGTTAGTGAATTTCTGAGCTTTGGAAGCAAGAACAGTTATATAAATATGTGTACACACACATGTGAACTTTTTTATACTTGGACAAAAATATACAGTAAATGTACTTGCTGCATTTCAACACATCTGGTGGACCAACAGTCACTTAACTAACTTTTATGACTTTGTTGACATCATTGCTATTTTAAAGTCATTGTATAGAATGCTGTAAATCTTAAACTTAATATATAATAAGTCCTAAAAAAGACTTTTGAGTTGGTGAAGGAGTTAATCCTTTCTTGAGTAATTGAGTAATAGCTTTAGTGTGGTCTGATACTATTTTGTCAGTTCAGCCATCTATTTCATATTGTTCTTACACAGACACAGCACGTTTGTTTCCCTGTTTTGCACCTTTTACAGCCTTTACCACTGTGTATGTTCATAAACACCAAAGGAGAGCAAAGGTGCAGAATGTTACCATAAGATGCAGCTGCTACTCATAGGGCCGAAAAGCAAAGCACAAATAATAAATAGTTAAGAACTACTAAATAGTGTATAGAGTAGGGAAAATAACACTGCTTTTTATTATATTCATGTCTTTCAAGCCTTTTTCAGAATACGTGCCAGTCACTGAAGTTGTAAATAATGGTGCCTTAACTTCATATGCTTCTCTGGTACTTCATTCTGAGTTTTTTCCTGACTTCATAAATAGTTCAGTAGTTTCCACTCACTTTTTACTAAAATAAGAAGTAATGTACACTTACTAATGTTTTTCCCACAGATAGATAATTTTCTATACTTCAGATGTATAACTTATTTAAACATCAGCCATTTGATACATGTTTTTATTGCCCAGTAACTGAATGAGATTCATCAATATAACTGTACACTAAATTCCATCATTCCATTATAATCCTACTTTTATTCCCAGGAGTGTGAACTGAAATTTGGTAATTTCACCCCCATGTATCTATACTCCACTGTCTCATTAAACAAGAGAAAATGTGTGCACCCAAGTGTCCATTCCTGTTCTGTAGAAGAACTCCACAAGTAGGGCAGACTCTTCACAAGAGGCCCAGGACAAGAGATCCAGGGTCCACGCTAAATTTTAACGTATACCTTTATGGCACAGTTTGTCTGGTTTACTCAAAATATGTGAATATTTTACATTCACATGAATTACTTTCCTTAATACAATATTTAGAGTCATTAGGGACATGATTGAAATCATTCTCTAGTAACCATTAAGAATAGGTTCATTTTTATTAGTTATTCATTCAACTTCACACATAAATTGTTTAGTTTGGATAAAAAGGTATATATAATATTAATTCTCATGGCTAGAATAGGAATTCAGACACTTAAAAGTTACCACTTTTAAGTAGTAAGAGATTGTAGCAATCTAGTTGCTGTGAGATAACTGATAAAATATGCAATGAAAAATACCAAGAAAGGAAGGACAATCTCTGATTCAGTTGCCCAGAACAGAATTTTTATAAACTGTGCAGATATTTAATGTAAATGGTGATACCTGCAGAGCAGACATAGAAGAGTTGAGATGTATCAGTGGGACAGATTAAATAGAAAACTTGAATTTTTGGTGCCTAACACTAATGGTCCATTTGTAGGATACCCCATATATGAATGTCTTTTTTTATATTAAAATGTGTTGTCTATTTAATAAGTTAATTAAAATGCAGATCAAAGCACCACCGTTTATTTGCTTTTTCCATATACAGTTAACATTTCCTTAAAGTGTGTAAGTAACTTTGCAAATGTAAAAAAGTACTAGATATTTTCACTTGTTTTTAAGACCTAATTCCATTCCATGAATTGTCACTTATCCACTGTTTTAAAAAAAAAAAAGTACTGTCTTGGTAAAAGGTCACTGTTACTTGGACTCAGTGTATGCTGCCTACTTGCAGTCTTGTTACGGCAGTGTCTTTTACAAGTAGAGCTAGAGAATGGGATGTCACTTTTCAATTATAAGAAATAGGGATTCTTATCCAAAAGTGTGTATTATATGCTCTGTATAGTTAACCAGAGTTCAAACAAGTGGTAATGTTTCTCTTAATTTAACTCATTATGTGCCTTCTTTGGACATTAAAAAACACATATATTAAATGTATTTTAAATATAAGTTATTTCTTTGTGAACGCTAATCGTCAGCCCTTACCAAAAAAATAAATTGACAGAGGCGCCTCTTTGCACTACTTACTATCAATAAACTTTAAATTGGTTGTTTTTTGAAACATTTTTTTTTAAAGCTTGCATTAAAGTAAATCTGAAACAAATGTTTAAACAAACTAGCTAAGACACTAATTTTTATGTATAATCACAATGTTTCACACCTATCTTTATTGAGTAAAAATAGTTATGCTACATGTAAGACTGTGTGTAAAGAATAATGGAGCTAAAAATACATTTTGTAATGATCATAGTGTAACTTAAGCAGAATTTTTTCCCCTTGCAGTGTTTTAGAATTTGAAAATAATGGTTTCTCAAAGAACCTATTAATTTCTGTACTGAGGAATCCAAGACTTGCACTGATGTTTTTATTACTGCCTTTATAAGAATCTATAGGTATCTCAATGTTAAGGCATGTATGATCTTTGGTAAAATATTCTTTTATCTTTTCAAATTAATGTTATATGAAACTTTCAATATTTTGCCTTAAATTGGTTGACTGTTTTTTCTATGATTCACGTGGCATTTAAAAAAGAAAACATTCAATTTGATACTTAAGATTTAAGATCACAAATGGATAAAGCCCCACTACCATAGTCCATGGATTTACTTACATGCTGTTTGACTAGCAGTGCAAATAGGAATATATATGGCAATTAGTCTCATCTATAAGAACCAAATAATTTAATTATATTAAGGTAGTGAATAAAGATGTATAATATTTTTATTAATACCTTAAAATATTCAGTGGATTGAATGTGACTTCATAACTGTACTATGATTGTATTAAAATATTTCTGGAACAAAGGA EMBV3_06151 ACCTTCTCGGTAGTGGAGGAAGAGCGGCCACAGGACCGAGATAACATGGTGCTGGTCGAC Gene GeneID:100337474|LOC100337474:XM_002691685:106_cdna Constitutive 1 NULL GeneID:100337474 11 GENE LOC100337474 NULL anaphase-promoting complex subunit 2-like EMBV3_26171 ATCTTCCCGCGGCTCCGTCAGCAGCCAAAAAGGAGAAGCGTCCATCGGAAAAATGGCATA Gene BVT0102_375357 + 0 NULL GK000005.2:11308715-11972437 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07799 CTCGCATTCTCCCCTCACCACAACCCCTGGTAAACTCTAAGCTACTTTCTGTTTCTGCAG Gene BVV0102_249070 - 1 EMBV3_36780 GK000010.2:85759040-85776884 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16935 CAAAGAAGAATTGAACCACCCGCTTGGTAGACCTGAGAACTGGGGACAGATCTATTGGCG Gene GeneID:539641|UTP6:XM_002690655:204_cdna Constitutive 0 NULL GeneID:539641 10 GENE UTP6 NULL UTP6, small subunit (SSU) processome component, homolog (yeast) EMBV3_07282 ACAGGAAACGCTGTCAGGGACCATTCCGCGACATTTCGGAAGTTTTGGAACAGCGCTACA Gene GeneID:618365|SPATA17:XM_002693949:37_cdna Constitutive 0 NULL GeneID:618365 16 GENE SPATA17 NULL spermatogenesis associated 17 EMBV3_24168 CAGCCTGAGTCCAAATCCTGGCTTTCGTACATTTCAGCTGTGTGAACTTGGGCAAATCAC Gene BVT0101_008779 + 0 NULL GK000011.2:74483871-74494565 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025495 1 XLOC_014776 NonCoding TCONS_00025495 XLOC_014776 NonCoding NonCoding - 11:74483932-74487155 - TSS18505 2680 1 TCONS_00025495_1 88 0.117910447761194 2 0.168839230291744 0.00101534977119503 0.000536167298766577 0.000656066486197323 0.000151830032723376 0.000670572151849799 0.000286965416959593 0.000184960366354547 0.000556160257514612 0.000644753920863343 6.14103347476199e-06 6.83340017779544e-06 1.33420968373164e-06 4.81782400429714e-05 2.80835874382072e-05 3.66134494333423e-05 0.000542028822229545 6.19487206413509e-05 9.36226077903031e-06 0.0011746417198431 0.00108944905000808 0.000492739691155871 0.000135676446610104 7.1886279554024e-05 5.00435528987357e-05 0.000480856292576034 0.000814961376411686 0.000450367682697208 3.58401981387446e-06 2.53598898442807e-05 0 XM_005192518.1 NFATC2 PREDICTED: Bos taurus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 (NFATC2), transcript variant 9e-07 60.8 78.67 0.0276119402985075 NM_001013031.2 SORCS1 Homo sapiens sortilin-related VPS10 domain containing receptor 1 (SORCS1), transcript variant 2, mRNA. 9e-07 60.8 72.38 0.0354477611940298 0 noncoding 0 0 0 0 -0.650408361726886 0.02510258373779 -0.025911827542628 0.589431950653344 CTATGGGTCATTGCTCAAACAGAAGATTTGGTTAGACTTCTATATAGGGTCAAGGAAATGCCCTTACTTTTTTTGTTAGAATTAATATAGTTCTTTCAATCACCCAGGTTTAAAACTTAGCCTTTAAAGTCCTTATCTCTTACTCATTTTCAGGTCTTATAATCGTTGGATCTAGGACACCATCAGATTTAAGATACACAGTAATTTTTACCTGTTGTTAAGAAAGGGGAAATGCTGCCACTTGAGACATACAGTTAACTGAAAGATGTATTCCAGTTTCAAAGATATAAAATTTGTTTAGTAAAATATGTCAATACCACATCTATTTTCTTATAGCTTCCAGTGCCACTACCCTGAATCGGGCTCTCATTTTCCTCGTGGGTGTCCCACTGGTCTGCCCACCTAGTGTATCCTGGTCACAAGCCAGCAGATGACCTGCCACCAGGCTTATGCAGGATCACTGAGCACGCTTGTCAGTACAGGGTCCTACTTGCCCATGGAAGAAAGTCAGGCTTCCTTAGATCAGCCCTCAGGCCCTCCGTGTTTATATTTCCTAACTAACTTTTTAGGTGACTCTTCAATTCCCTTATTCAAACTTGATGCATCAGTAAAGACACTCCAGTTGCTGCCCTCCAGTCTCTGGCCTGGGAGTCGAATGTTAGGACTCTCCTCCTCCCTTGCCTGCCTCTGGACGTAAGCTGTTTCTGGCTCCAGTGCTGCCACCTTCACAGAGCCTAACCCAGCCACAAATGATAGCACCCATCTCTGAATGTTTATATAATATAGACAGTGCTTAAAAATAGGCAGGGTCAGGGGCATAATGGAGGACTGGCCTTGAACAGGGAGAGAGAGAGAAAACTTAATTTTGAGACTAGAGGAGAGGGAGTGGGGAAAAGTATGAATATATATAAGTTCATAGTGGAAGAAATACCTGTTGACTTAATTTTCTTCTATGAAGTGGGAAGCATATAGTCTTCCAGAACAGTGAATAAACTTTCTGAGCACCTTATTACATGGCATAACATAGTGGTTAAAGCTCAGACTCTGGTGTCAAACAGCCTGAGTCCAAATCCTGGCTTTCGTACATTTCAGCTGTGTGAACTTGGGCAAATCACTCAACTTCCCTGAGCCTAGGCCCTTCATCTGTAAAACAGGGATTTACAGGAGTGCCATGTGGATTAAATGTGTCAGTGTGTACAAATCCTGTGGAACAATGCCAGGGCACTCAGTGCCAGAACCTGAGTGTAAAAATGTAAGACACAGCCCTTAAGAAGCTTTGAGTCACGTAAGCCAGTTGTCTAACTCCTTTTCTGTGAAGTGATGCCATCCACTCCCTGCTACTTCCATTTAAGACAATTAGGTAAATGTTTCCAAATGATACTGAATTTTAAAAAAAATCTATATATTTTTAAAATTCAAATTCTGCAGTAAGACAGTGAGTGATACAGTCAGAGAGAGATGAGTGTCTATACAGCTGGGAGATAACAGCTCAGGCAAATGCCTAAAGCAGCTCCCAAGGGAAGAAAGGATAGGCACTCAAGTGAGAGTAAGACAGTAACGGGGAAGCAGCAGCTTTCCTTAGTAGAATCAGCTAAGCTTATTATCATCTGAACTCAATCAGAGTTTCTCAAAGTGTAGTCCCTAAATCAGCATCATTTGGGTACTGGTTAGAAATATAAATCCCGGGGCCCTACCCCAGACCTACTGAACTGGAAACTCTGGTATTATCTAGAAGCAGCCTGGTCCCAAGAGGCAGCCAATCTAAAATGTGTACGATGAATGTGTGTGATTTCAAGTCAATGATAGTGTATGATGTGCTTACAGGAAGGAGGCAGGAGGGAGAGCAAGAATTTGGCACTAATTACACTATGTGGCCTTGCACACCAAGTTTACAAATAAAGAAATTTTTCTCCAATGGAGCAAGGTTGTGTTGCTAGACCTAGAATAGGCGGCAAGTCCTTGAAAAGGATCTATGCTTTGATTCTGAGATGCCACCCTAGGGGTGTGCGCTGCCTCCTGGTTGAGAACTGTGGCAACAGTGAACCACTGCTGCTGACAAGAAGGTGATAGTGTGGAAAAATGGCTGAAAACCACTGCCCTCAGCTACCTTGGCCTCACAAGTTTTAGCCATCCTCTGAGGTCAAGTCAGCACAGCCCCAGCTTCTCTTCTACTTTGCAAGGGCCAAAAAAGTGGCACCCAAGTTCTTAACCTAGGTTTTTGAGATATAAAAAGCAGATGAAGGAAAAAAATGTCATTTTTACTATCAATAGGTTAGACAATAGAGCTTTATGTGACCCCTGAATGGGCTTGCTACTTTCCTGTCTGAAGGGAAAGCAGATACCAAAGTTTCTGCTTCCGGTCACGGGGAGAAGTAAAGAGAGAATAATAAATCCCCCATATTCAGTCTGTCAACTTTGACTAGTTCCATCCAAATGAGAAACATGGACAAAAGCAACCATCCACCAACTAGGCTAGTCAACCTGCACGAGGAAGAGCGAGGGGAGAAATGGCAGACTCCATATGAACATTATGTTTATTAAACTCACTCTATAAGGAGAGAAGTGGGGAAAAGGCATTCCACCTTCTCAACACTGATGTAAGGAATTCTGAAGAAGAACTAATGATCCAAGAGGAAGACTGTTTTGACAACAGGTTCAAGATAGATTTGCTTGGAATGGG TCONS_00025494 s 3' 63 TCONS_00025494 s 3' 63 EMBV3_03167 AGACTGGGGCATGGCTGTGTAGAAAGGTTGTGTAGTTACATTTATGGTGGCAGTAGTGTG Gene GeneID:614441|RGS20:NM_001076327:53_cdna Constitutive 0 NULL GeneID:614441 14 GENE RGS20 MGC139201 RSG20 regulator of G-protein signaling 20 EMBV3_03796 GTTGAGTCTGTCTCTCCCTTAATCTCCCTTATCAACAAAGTTCACACCCTATCCTCATAT Gene BVT0102_003763 + 1 EMBV3_23955 GK000030.2:92893908-92897951 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43596 AGCTGCTGGGTGCTGAGCGTTCTGCTAGAAATTTTGCTTCTGATTGGTTTTGGCGCACTT Gene GeneID:100337507|LOC100337507:XM_002694067:267_cdna Constitutive 0 NULL GeneID:100337507 16 GENE LOC100337507 NULL hypothetical protein LOC100337507 EMBV3_30888 TGCACGTGATGTCCGAGAACATCCTCACAGAGCCGAACACGGTCAGCTACAGCCAGTCCA Variant GeneID:514788|ACOT7:NM_001075682:121_cdna 454^660 1 EMBV3_05451 GeneID:514788 16 GENE ACOT7 MGC139763 acyl-CoA thioesterase 7 EMBV3_32700 GCTGATGACTCATATCCTTCTGCACTAACCAACCAGTCACTCTGTTCCCTCATGATAGGC Gene BVV0102_338605 + 0 NULL GK000002.2:122328299-122343233 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24483 GTGTCTGACCCCAGCAGATAGGGGATTGTGTCAAGCCAATGTGACCAGATTCTACTACAA Gene GeneID:508763|TFPI:XM_002685241:16_cdna Constitutive 0 NULL GeneID:508763 2 GENE TFPI NULL tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) EMBV3_04127 GTGCATCTGTGGCCCTGTCCTTCTTCATATTTGAGCGTTGGGAGTGCACCACGTATTGGT Gene GeneID:509812|TMEM107:NM_001083657:9_cdna Constitutive 1 NULL GeneID:509812 19 GENE TMEM107 MGC157051 transmembrane protein 107 EMBV3_28633 TGAAGCCCTACATCATTGACCTTGGCTCCGGCAACGGGACATTCCTGAACAACAAGCGAA Gene GeneID:525944|SNIP1:XM_002686469:516_cdna Constitutive 0 NULL GeneID:525944 3 GENE SNIP1 NULL Smad nuclear interacting protein 1 EMBV3_40515 GCACAGAAAACTGAATCTGTAGCTAACGAGGGAGAATGAATGGTCATGAAAATTGGGGTT Gene GeneID:515652|HMGN3:NM_001034504:2_cdna Constitutive 0 NULL GeneID:515652 9 GENE HMGN3 MGC128425 high mobility group nucleosomal binding domain 3 EMBV3_28845 GGGCTTGTGCCTTCACCAATGCACTGACCCACACTATTGCCCTAACCACCCTTAACTTCT Gene GeneID:617122|LOC617122:XM_002695731:399_cdna Constitutive 0 NULL GeneID:617122 19 GENE LOC617122 NULL similar to olfactory receptor EMBV3_21038 TCAGTGGAGCCCACCCAGCCAACCCCCCAGTGAGAGAGAACAACTGGCCGCCCCTGCCCG Variant GeneID:534312|SCAMP2:NM_001102170:118_cdna 320^437 2 EMBV3_43460 GeneID:534312 21 GENE SCAMP2 MGC166390 secretory carrier membrane protein 2 EMBV3_38355 AGGGACCTTTCCTAACAGATCCAATGTCTGAGGCTGTTGTCTCCCCTCAAAGGTGTGGGA Gene GeneID:515022|CCS:NM_001046187:6_cdna Constitutive 3 NULL GeneID:515022 29 GENE CCS MGC137566 copper chaperone for superoxide dismutase EMBV3_08983 AAGACTCACGGTCACGTGAGACCTGCAAGCCATCCTTCAGAGAGGTTTTCCGGGTAGTGG Gene BVV0102_341223 - 1 EMBV3_37228 GK000006.2:119356881-119388903 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22321 GCTAAACATTGCAGGTGTGAAACTGCTGCTCGTCAGATGGCTGGTTTGGGTTTAACTGCG Gene GeneID:444868|SLBP:NM_001045880:45_cdna Constitutive 0 NULL GeneID:444868 6 GENE SLBP MGC134385 histone stem loop binding protein EMBV3_13987 GATCTAGCAGACACAGACAGGACATAGAGGAACTGAATTGCACAACTGACAAGCTGGGTT Gene BVT0102_057728 - 1 EMBV3_17654 GK000009.2:9933802-10012235 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00297 ATATGGCATTGCCAGATTCTTCACAGAATAATTTGCTGACCATGAGGGAGTATCACTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13177 CTGGCCATGAGCAAGGAGGAGGCCGACCAGGAGGAGCGGATCCGCCGTGGGGACGACCTG Variant GeneID:508199|EPN1:NM_001038670:154_cdna 610^684 1 EMBV3_21315 GeneID:508199 18 GENE EPN1 MGC134173 epsin 1 EMBV3_39542 CTTGAAGGCTTACAGAAAATGTGAGTTGATATTAGTTACTTTGGGCATGTATAAGAAATA Gene GeneID:787762|SFRS13B:XM_002690195:44_cdna Constitutive 0 NULL GeneID:787762 9 GENE SFRS13B NULL splicing factor, arginine/serine-rich 13B EMBV3_37800 ATACCTGGAATGGAAGAACAGCTGAATAAGATTCTGGTTCTTTAAATTTGCTGCAGCAAT Variant GeneID:539993|SERINC1:NM_001035427:11_cdna 235^404 1 EMBV3_40045 GeneID:539993 9 GENE SERINC1 MGC128951 SERINC2 serine incorporator 1 EMBV3_31805 TGTTAGATCTCATTCACCTCCGCTTTCAGCACAACAAGGCTAAACGGGTGTTCTCCGCCG Gene GeneID:782125|SIAH3:XM_002691828:520_cdna Constitutive 0 NULL GeneID:782125 12 GENE SIAH3 NULL seven in absentia homolog 3 (Drosophila) EMBV3_41679 TGCACGCTCCACTGCGAACAGATGGGAGAACTGAAGGCAGAGATCAGCAAACTCCACAAA Gene GeneID:508100|CDK5RAP2:XM_002689955:6_cdna Constitutive 0 NULL GeneID:508100 8 GENE CDK5RAP2 NULL CDK5 regulatory subunit associated protein 2 EMBV3_34600 CCACACACCTCAAAGCTGAGGAAAACTGAGACTTGAAACAGGGCAGAAATCCGGCAAGGG Gene BVV0102_249763 + 0 NULL GK000020.2:31656147-31696672 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39575 ACCACACACACCATCCTCATCCCCCACCTGGTCTGATACTGAGGAATGCAGCTCTTCTCA Gene GeneID:353106|PPARD:NM_001083636:8_cdna Constitutive 0 NULL GeneID:353106 23 GENE PPARD PPAR-beta peroxisome proliferator-activated receptor delta EMBV3_33861 CCCGCTTTGTCTTCTCCCTCGTGGACGCGATGAATGGAAAGGAAGGAGTCGTCGAATGTT Gene GeneID:281306|MDH2:NM_001013587:38_cdna Constitutive 0 NULL GeneID:281306 25 GENE MDH2 MGC134027 malate dehydrogenase 2, NAD (mitochondrial) EMBV3_07896 CTATGCTGGGGCCAGATGTGAGAGAGTTGACTTGTTTTACCTAAGAGGAGACAGAGGGCA Gene GeneID:280737|BTC:NM_173896:5_cdna UTR3_Alt 2 NULL GeneID:280737 6 GENE BTC NULL betacellulin EMBV3_05321 CGTACACACACGTTTATAACAGCACTCTTGACCATAATCGCCAGAAGGCAGGAACCACCC Gene GeneID:787967|ATG7:NM_001083795:170_cdna Constitutive 0 NULL GeneID:787967 22 GENE ATG7 MGC140108 ATG7 autophagy related 7 homolog (S. cerevisiae) EMBV3_00099 GTCTGTTATTTCCAGCTAGTTCATTTTTCTCTACAGGCATCTGTGTGTCCCTCTCTGGCC Gene GeneID:533266|GPR120:XM_002698388:277_cdna Constitutive 0 NULL GeneID:533266 26 GENE GPR120 NULL G protein-coupled receptor 120 EMBV3_42258 CCCTGGAGGAAGGAGACGTCAGAATCACTGGTCTTCCGAGGGGTTTAAGGGGTTTAAGAT Gene GeneID:512726|SHF:XM_002690907:180_cdna Constitutive 1 NULL GeneID:512726 10 GENE SHF NULL Src homology 2 domain containing F EMBV3_06282 GTGAGACTAGACTGCTGTATGCCAGGAGCTCCAGGCATCGGGTCCACCTGCCCGCCAGCT Gene GeneID:100335990|LOC100335990:XM_002699570:97_cdna Constitutive 0 NULL GeneID:100335990 X GENE LOC100335990 NULL hypothetical protein LOC100335990 EMBV3_25560 AGCCATTGGGTGTTTTGTGTCCTGGAATGCTGCGGTGGTGGAACCTAGCATCTGGTAGAT Gene GeneID:508704|CCDC120:NM_001101906:48_cdna Constitutive 0 NULL GeneID:508704 X GENE CCDC120 MGC166385 coiled-coil domain containing 120 EMBV3_43093 TTGTTGTAGCTGACCACCAAAAGCAGTCAGTGCAAATCCTTGCATTCTTCCCTATCGCTT Gene GeneID:540111|NUP160:NM_001105630:87_cdna Constitutive 0 NULL GeneID:540111 15 GENE NUP160 MGC159928 nucleoporin 160kDa EMBV3_18193 GCAAGGATGCAATGGCAGCATCCAAGCCCTCCAGAGAAGAGGAGGAAATACTACAGAGAG Gene BVV0102_215540 + 0 NULL GK000016.2:52236397-52240500 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067516 TCONS_00067517 TCONS_00067520 TCONS_00067525 TCONS_00067522 TCONS_00067519 TCONS_00067521 TCONS_00067518 TCONS_00067523 1 XLOC_041472 Coding TCONS_00067516 XLOC_041472 Coding Coding SLC35E2 16:52219740-52240291 j TSS50752 5438 1 TCONS_00067516_2 294 0.0358587716072085 8 0.735766423357664 0.000614754307707906 0.00101064542137401 0.00146869445202639 3.13921331421569e-09 2.42047301624548e-07 3.44712892424424e-05 0.000882512909236957 1.28338439824715e-24 0.00058866280264774 8.60701469438851e-96 8.69780431860766e-05 0.000129353578665088 8.0166234928736e-30 2.61679059712691e-05 0.000848086784895535 0.00246249483412474 0.000543388518054219 0.00204572876094513 0.00078463899383077 0.00148844466440704 4.68065699207471e-20 0.000388646439453389 0.000460532932453376 0.00066376953608709 0.000101973419507987 0.000708266564787832 4.03602506543758e-08 1.23912832424428e-17 1.01187748947952e-19 0.000645207655380345 XM_005217097.1 SLC35E2 PREDICTED: Bos taurus solute carrier family 35, member E2 (SLC35E2), transcript variant X1, mRNA. 0.0 8134 100.00 0.82916513424053 NM_001110781.1 SLC35E2B Homo sapiens solute carrier family 35, member E2B (SLC35E2B), mRNA. 0.0 966 83.85 0.164950349393159 TCONS_00067516_2 sp|Q8C811|S35E2_MOUSE S35E2_MOUSE Solute carrier family 35 member E2; 0.0 528 86.39 0.996598639455782 3 coding 0 0 0 0 -0.105240204935381 0.378759453833188 0.00156323617842988 0.972649404288062 TCACCCAGCAGCACCACACCAGCCTGGGCCGAGGTGCTACAACGCAGAGGGGACCAAGGCCGCGGGGGCCGCCATCGCCCAGCTGCACCACCCTCGCCTGGGCCACGCATTACGGCCCGGAGAGTACCAAGGCCGCGGGGGCCGCCATCGCCCAGCTGCACCACCTCCACCTGGGCTGATGAGGGGCTGTGCAGATGCTCTCAACCACGCTTATTGGCTGTGTTAAAATATTCGTTCCCTGCTGTTTGTATCAGCACAAAACTCGGCTTTCTTACCCACCCAATTTCATCATGACCATGCTGTTCGTGGGCCTGATGAGGTTTGCAACAGTGGTGTTGGGTCTAGTCAGCCTGAAAAATGTGGCGGTGTCCTTTGCTGAGACCGTGAAGAGCTCAGCTCCCATCTTCACTGTGATCCTGTCGCGGACGGTCCTGGGGGAGCACACTGGGCTACTGGTCAACCTTTCCCTCATCCCGGTCATGGGTGGCCTGGCACTGTGCACAGCCACCGAGATGAGCTTCAACTTCCTGGGGTTCTCAGCCGCCTTGTCCACCAACATCATGGACTGTTTGCAGAATGTTTTCTCCAAAAAACTCCTCAGTGGGGACAAATACAGATTCTCGGCTGCAGAGCTGCAGTTCTACACTAGCACAGCGGCCGTGGCTATGCTCGTCCCAGCCTGGATCTTCTTCATGGACCTGCCGGTGATCGGGAGGAGTGGGAGGAGCTTCCGCTACAGCCAGGACGTGGTGCTGCTGCTGTTGGCAGATGGCGTGCTGTTCCACCTGCAGAGCGTCACGGCCTACGCCCTCATGGGGAGGATCTCCCCTGTGACCTTCAGCGTCGCCAGCACTGTAAAGCATGCCCTGTCCATCTGGCTCAGCGTCATCGTTTTCGGTAACAAAGTCACCAGCCTGTCAGCTGTGGGTACCGTGCTGGTCACAGCTGGCGTCCTGCTCTACAATAAGGCCAAGCAACAGCAGCGCGAGGCCATGCAGAGCCTGGCCTCGGCCACCACCCAGCCCCCGGATGGCAGCTCTGAGCTGCTGCTCCCCCAGGACCCCCGGCCACACCACTGAATCCCAAAGCCATGGGGGCACCACACCACCCCCTCTTCGCTGACGGGGGAACCCCTTTGCCTCTCTCTCCCTGTGGACAGCGGGTGTGGGACCACCTGGCTCTACAGGTCACAGTCATTGTGGGAGGCAAGGTGGGCAGCCTTTTCCGCTTTTTTCTGGGGCTGTCAGTCAGAACTGGCAGGAACTTGAATTGGGTTGGAGAACACAGCTGCCACTGAGCCATGGCTGAGCCCCCTGACAACCTCCTCCTGGCAGCCTCTGCGCACCCCAGCATCTGGGCCAGGCCCCAACTCCTCTGTGAGTGATGACCACTTGGGAAGCTGGAGCTGTGTCCAGGTTCCAGCGGGCACCCCCTCACTTGGAGCCAGTGTGGGGTACCGGCTCCTTCATGCCAGCCATCAGCAGCTGCTGGAGTCCACCCTGCTCCTTGGCCATTGGGGATCTGCTGGGCTTGGCCAAGCTGAGGCCCCCAGGGCCAGGGCGTGGAGGCCACTGCAGTGGGCATAGTGGCATGGGACAGATGGGGTGAGAACCTGGGGTTCCCTGCTCCTGAGGACAGGATGTCTATCTCCTCTACCCAAGGCAGAGCTGTCGCATCAGTACCACTTAGGGAAGGTGGGCTGCCCCTCCCCACATCTGCTATGCTGAGCCTCCCACCTCCAGAGTGTCCTGTCCCTTGTGGGCAGCCAGGTTGCGCCCCCCCCACCTCAACACCCAGACCCAGATGTGGTTTCCGGCCTGAAAGCTACAGGTAGATGACCACAAGGCAAGGCGGGGCTGTGTCCCTTCTGTTCCCATACTCGTAGGTTAGAGGCAGGCTCTTCTAAAGGGGCTCCAGGAGCCCGTTTCCACCCAGCCAGTCTCGAGCCTCCTGGTCTCACTGACAAGGGTGTTATGATTTCCCCCTTGTGAATGATGAACAGGACGAATGTGGAGTGTTTACACTTTTGTCATGCTGCATTTTAAATGACAGTGTAAGTTTTAAAAGGAAACACAGGTACAGATGGCTTCTGGAATGCATGGACTGTGCTGGGTAAACCAGAGTCAGACCCACGGCCCAGCCCGGCCCTCCTGCCCCAGGGCAGACAGCCAGCCAGCCAGGTGTTTAAGGCTCCACCTCTCTCTTTACTCCTCGCCCCACATCCTGTTGGAACTTCTGGTCAGGGTGGAGCCCCCCTCCCACCTACCAGACTGGAGCTCTGGGATTTGTCAGGCACAGCCCAACTCAGGGGCCGCGGGCTGGCCACCTGCCCGTCTCTAGCCGGCCTGTGGGATGGAGCGACCCGAGGGCACAAGTGGCCCACGAGTCTCGGGAACAGTCCCTGCTGTCCAGGCCCTGGCGCCTTAATTGCTTCTCTGGTTTTCTGGTTGGCTTCTCAACTGGAAAATATAAACCAGCCCTTCCTGGAGAGCAAGTCTCTTAGAAACAAAGAGCAATAAGTGCATCTCATTAAGTTCTGCCGACTTTGAAAGTCTGTCGTGATGAGGGATTAAAAATGGGGCCTTTTAACTACAAACAACCTTTTATGAAGCTGACCTCCTTGCTCAGAGGTCAGCAGGTCACACGCAGCTTCCCTGTACAGGGTAGCAGGTGTCTTTCCCAGGTTTCCCCCCTTTCCTCTTTTTCTGCTTACCCTTAAACAAAGCTAAAGAGGATGCTGGGGCAGTGGCTGGGGCAGCGCATTGCTCTGTGAGGACCAGAGGGAAAGCACCACTTCTGGGGGGCTCTTGCCTCTGCCCTCAGACTGGGGCCACAACACCTGCAGCTGCCGGCGAGACATGAAGAAGGGGAGCATGTGTGTCGCCAGCTGCAGACTGTCATCTGAGAGTGAGCAGGTGCCAGCTGCTTGTGTCTGAGTGTTGTTAGGGGCCTCTTTTGATTTTCCAGATTTGGGGACCAGAAAAGATTTTCCTAAATTATTAGTAAATGAGGCAGTTTCTAGCAAAGCTGCTTTTGGGGCATCCCCTCATCCCCAGCAGGGAGTCCGGGGCCTGGCACCCACAGGACACATGCTGTGGCTGTATTCCGTCCATTGACTGCCCAAAGTCGTCCACATGGTGGGCGTTTCTGGGAGGAGAGTCAAACCCCACAGCCTGCGTGGGCGTTTGCTTAATAACTGTACAGACATGTTTTTTAATTAACTTTGTCTAGTAGTTTTCTAGTATGTTCCTTTCACTGCACCGTCGCAGGCCAGCTTGTACCAACGCCAACACTAGGTCCATTTCCTCTGGGTCCATGGTCGTTGTCCGTGTCTTTGTAATCAAACTCATGAACCAGGCTTCCAACTCTGGTCATCTGCTTGCTTACGTCAATACTTAGAGATCTCTGGCTTTCAAGGAAATTTCCACTGTTGAGTGGCATGAAAGGCTTTTTTAAAAAAAAAAATTCTGATAGTCATAACTTCCTGCATATTAGCATTAAAATCATCTGCCTTGGAAAGCTGAGAATACTCTTGCATAATCCAAAATGTGTCTTTAATTTGTAAGTTACACAATAAAAATGTGCTGCACGAAGAGTAAGCCACGTGGAACCGCGCTAGCCGCAGGCCCTTGAAATGCTTGCCCCAAACCGAGGGACTTTGCCTCCCGTGTGGCACTGACTGTCCTGTGGATGGTCATATATAGACAGGTCAGCAGAGACCACAAAAAATGCAACACGACTTTCTACATCTGTCCAGGGGATGTGCTTCCTGAGGCCTGGAAGTATTTTCACTATTTACCTAGGTTGGAAAAATTAAACAAGGATGCTATTACAGGTAGAGACCCTCTTCTGTTTGCCTGTGACCAATGTTGTAGTAAGGGCTCTGTTCTTTTCCAGAATATGTTCTTGCCCTGGTTGGGACCTTTTCATTTTCCTAGCTTATAATAAGAACGCTCCTGCTTCCCTGATGAGTCGGCCTGTTTCTCTCTCCTGAAGAGCAAAGAGCAGCCAGGTGGTTGTGCTGACCATCACTTGGCTTGCTCACCCTGATGCTCTGGCTATAAAACCTTCCAGTTTTCTCTCTCTGTAGTATTTCCTCCTCTTCTCTGGAGGGCTTGGATGCTGCCATTGCATCCTTGCCTAGATGTCCAGACTGACTTGGAAACTGTTCTAATTGGCAAAGTCTTTTTTTCTTGCTTTTAACTTGAGGGAAACTGGCATTCAGTTGATGTGCTATTTCTAGACTGTAGATGTGTGAGTTGAGTCTGAACCCACCCAGGGAGTATTGTGAACCCACCATTGCAGAGGGTCACAGTGAGGGTGACTTTCCCATACTGAAAAACTTGAAAATTATATGAATAAATTGTCTATATCAGAACCAAATTATACTTGCTTTACACCAAAAAAAAAACAACAACTGTGGAGAACTAAAAGTACATTACTCAAAATTTTAGTGTTTATTTCACCTATTCCAGTATTTATGCAATTAGATCAATTTTTCCTAGAAAAATGGTGGTTACATAATCTAGTGAGTCACTGTGTATTCTGCTATGGTAATACATCAATGCTGTATAATTAATCCTGTGGATGCCTACTGGTTACTCTGTCCAAATTAAGCTACCATGGTAGCAACTATCTAGGACTCTTGGTCTGCAAAAGTAAAATAAATGTTCAGTGTGTACTTTGCTTTCTCCTTTGTGTAAGACTCAAGTGTTTGGGCTACTGAAATGAACATGGGTGGGTTCTTACTGCCTTCATCTGTTTTTTGAAGGTTTTTCCTGTTACCAAAAACTAAGGAAGCAAAACAAGAGCTTGGGCACAGAAAAAACATTTCTTTCCAGAAGAGAAAGAATTTCACTTCCACACACCCTCTTTGGGCCCTAATTTCTTGTCAGATTTTTCTACATTTTCCACTTCTGGCCAGGTAGTAAACTGGAGGTGACGTTAAGTGGTAAAGAATTCGCTTCCCAAAGTAGGAGATTCAAGAGAGGAAGGTTCAATCACTGGGTTGGGAAGATCCCCAGAAGGAGGAAATGGCAACTCACTCCAGTATTCTTGCCTGGAAAACTCCATGAACAGAGGAGCCCGGTGAGCTACAGTCCATGGGGTCGCACAGAGTCGGACACGACTGAGTGCACACACTGCAAGTGAATGATACTTGTTTACCGTTCTCTTCCTGAGAGTCACGATGTCGCATTACCATTTTTCTGTGACCACAAAAGTTCGAAGAATAATTTGCTTGAACTTCAGCAGGTTTGAGGCCGAACCTCAGGATTCAATGTGTTTAAAAACCTTCGCAGGCGAGCCTGAGTAAGCACTAACAGTCATCCCTGGTCTTCGCACAGCTGAAAATCCTGCGGTAACCGCTCTTCCCGCCCCGCTCCGTAAGCAAGATTCGTCTCCTTTTAGGAAGATTCAGGGTCTTGCCCCGGGGTCAC EMBV3_17363 TGAAGATGGAAGTCGACCAGCTCAAGAAAGAAGTGACGCTGGAAAGAATGCTGGTGTCCA Gene GeneID:281796|GNGT1:NM_174327:12_cdna Constitutive 0 NULL GeneID:281796 4 GENE GNGT1 NULL guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 EMBV3_10348 CCCACCCCCAGCTTAAAAGGAACAGCTTCACTGCCTTCAAAGTTATTAGTAACCTGTAAT Gene BVV0102_155157 - 1 EMBV3_00577 GK000013.2:58023710-58038248 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41106 CAGCATCTCAAGCATCCTGGTGGGCTCCACTCTCATTATTTCCTCCATTGTTATCAGAGC Gene GeneID:786928|LOC786928:XM_002694933:27_cdna Constitutive 0 NULL GeneID:786928 18 GENE LOC786928 NULL hypothetical LOC786928 EMBV3_07153 TGTTAGTGTTTAAGTGATTTAGGGTGGTTAGAGTGGTTACTATTATATCTGTCTTTAAGA Gene GeneID:515282|ALG13:NM_001080275:129_cdna Constitutive 0 NULL GeneID:515282 X GENE ALG13 CXorf45 asparagine-linked glycosylation 13 homolog (S. cerevisiae) EMBV3_01734 TGGGCCATGCCCTAGACCCTTCTAGTTGTCCTGCCTACAGCTTCCATTGCTTTTCTCCAA Gene GeneID:614262|VSIG4:NM_001046529:124_cdna Constitutive 1 NULL GeneID:614262 X GENE VSIG4 MGC137243 V-set and immunoglobulin domain containing 4 EMBV3_22258 TCGTCATGATCGCCACCGGGTGGGTCAAAGCCCCACCAAGGCCAGCCTGTATGGAGCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00962 AATGTACCAGCTGATCCCCACTTCTGATGGGCACTGCAGCCACGGGGAAACCAGCAGTTA Gene GeneID:537773|GFI1B:XM_002691653:383_cdna Constitutive 1 NULL GeneID:537773 11 GENE GFI1B NULL growth factor independent 1B transcription repressor EMBV3_31259 CGTGTACCCCTTCTTCGATGTGTGCTGGCACGACAAGGGCAAAAATGCGCAGCCGCTGCT Gene GeneID:528804|TRIM72:XM_002698073:63_cdna Constitutive 0 NULL GeneID:528804 25 GENE TRIM72 NULL tripartite motif-containing 72 EMBV3_12879 TTCTGCCACTGAAGTCTGCCCCTCAGCCCTGAAGTTCCCTACCTCCAACAGAATGGAATA Gene GeneID:530835|OPA3:NM_001079605:289_cdna Constitutive 0 NULL GeneID:530835 18 GENE OPA3 NULL optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) EMBV3_34112 ACTCCGCCGGCCAAGATATCAACCTGAATTCTCCTGCTGTCGAGGGTCTGACGGAGACCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25834 TCCAGGTCATTACTTAACGCTCTACAAAAGCTTTAAATCTGATTTTGAGACAGTTGAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42965 GGAGAGGAAAGGGAGCAAAGGGGAGAAAGGTCAGTAAAGTCTCTTGTTCCTTAACCCGTC Gene BVT0102_127066 + 0 NULL GK000025.2:3791615-3802676 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31001 AAATCTGGTTTCCCAAAACGAGGCCAGAAGCGGAAAAGCGGTTATGTGCTGACCTTCCCA Gene GeneID:509799|BAZ2A:XM_002687418:157_cdna UTR3_Alt 2 NULL GeneID:509799 5 GENE BAZ2A NULL bromodomain adjacent to zinc finger domain, 2A EMBV3_13888 CAACGGCAAGCCCAAGAGCACTACAACGCCACACTGAGCAGTCTGCTCCAGAGCCAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37358 TATCATAACTGCTCTTCCTACTATTTATCAGATGAGTAGTATGTCAGCACTCTTTCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17266 CAGTGGTGCCTATTTTATCCAAGTGCAATCCGTCCAAAAAAAGGGTTTAAGATACACTCT Gene BVT0102_009574 - 0 NULL GK000011.2:73122619-73134168 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14524 TTGTTGCAAAAAAAAATTATGATGGAAACTCAGCAGCAAGAGATGGCAAGTGTCCGAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02419 GGTTGTCGATTTTCTAAACCTTGTGCTCCTCTTCATTAATCTGGCCCCTAGGACTTCCAG Gene BVV0102_410176 + 1 EMBV3_03305 GK000002.2:18449879-18476152 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37025 CTTCCTCTTTAATTCTGCAAATGCTGAACTGTGCTTATATACACTATAACCAGCTGTGCC Gene GeneID:541125|ELK3:NM_001081542:40_cdna Constitutive 0 NULL GeneID:541125 5 GENE ELK3 MGC155084 ELK3, ETS-domain protein (SRF accessory protein 2) EMBV3_02305 TACAGGCCAAACTGATTTTCTTGAATTTCGGCACACGGTCCCCACTGTCTGGTGGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17700 ATGCCAAGCGCCCGGACTGAGGCTGATGTACACTTGAAAACTGAGACGCGAATCATGGTA Gene BVT0102_138740 + 0 NULL GK000024.2:60354471-60491320 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05167 AAAGCTCTTTCCATGTCATTTGGAAGCAGGTGTCCAGGGAGTGAGCAGGCTCTTGACTGT Gene GeneID:789939|LOC789939:XM_002690605:81_cdna Constitutive 0 NULL GeneID:789939 10 GENE LOC789939 NULL similar to TRD@ protein EMBV3_35112 TCAAAACGTACCAGAAAAGGTAGAGTGAAACCACTATCTTGGTCCTCACCACCCCTGGCC Gene BVT0102_170036 + 1 EMBV3_26154 GK000017.2:63007319-63254161 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075820 1 XLOC_046658 NonCoding TCONS_00075820 XLOC_046658 NonCoding NonCoding - 17:63164853-63172092 - TSS57061 2526 1 TCONS_00075820_1 146 0.406175771971496 4 0.651561204752694 0.000161587800159747 9.94500932269967e-05 0.000205156627189202 0.00022026093445763 5.27726908279232e-05 0.000253481054198949 9.58099161226286e-05 7.02460118519756e-06 0.000235048577958296 0 9.0624935711376e-07 0 1.13589936777191e-06 4.65557531461383e-05 3.88456074351674e-06 0 0 0 0.000616029771841855 0.000192170087880778 3.12466484127419e-05 0 0 0 0.000992916831458929 0.000108778053088971 0.00011713663648535 0 9.6092716239417e-07 0 XR_228327.1 LOC101907408 PREDICTED: Bos taurus uncharacterized LOC101907408 (LOC101907408), 0.0 1308 100.00 0.286619160728424 0 noncoding TCTCCTTTTAATTTAATTTTATTTTTTTCCTTTCATTTTTGGCCCTGCCACTTGGCAAGTGGGCTCTTATTAATTCCCCTACCAGGGATCGCTCTTATTAATTCCCCTACCTGTGCCCCGAGCACTGGGAGTGTGGGGTCTTAACCACTGGACCCCCAGGGAAGCCCCTCTCATCCCCTTTTCAGTTAGCTCACTAGTCTCTTTCCTACTAGTCTTCTCCACTACCACCACCACCACCCCCTCCTTCCCCAGGTTTCTGTCTCCATCTCCCATTTCCTTCAGTTTCTAAAATTATTAGTGCTGAGCCTGGAAGAGTTTCCAGCTGATCCTTACACCCTGGAGAAGATTGCATTTAAGTTACTCCCACCACCACCATCTCCGCCTCCAGTTCCTGCAGGCCTGGGCAGGGGAAACTGAGGCCAGTAGAGGTTGCCCAACTGCCCTCCCCCCCAACTCTGCAGTCTCTCCCAGCCCCCACCCAGCTGCCAGGAATGGGACCACCCATGAGTACAGAACAGAAAAAAAGGGTCCTTTGTTCCAGGAGATGCTAGAGACCCAGCTGAGAAGAGAATGAACTTGCAAACTTGATTCAACCACAGGCCTTGTGCCGTGACCAATAAAGGATGCTCCTGCAAGCAGCTCCCCAGCTCTCCCCAGACCTGCCACCACCACCTCCATCATCTCCACCTGCCAGTCTGCCTGACTCCATCTGCAGAGGAGAGACACGGCTGGAAACTGAGAGAGGAGGCTTCACAGGGCCCCACTGCCTGGACCACGGGCGCTGGGTTAGAGCAAGGCAGCCCTTCATCATTTCTAGCAAACTCCGTTTCCTACTTGGCAGGGGGCACTGCTCCTCTCTGGGCACCTTGGAGTCTCCTGCCTTCCAGGAAAAACATCAGGGAAACCTTGGGTCACCTCGCTTGGCTGACATCACCCATCTAGACCTCATCCAGTCCCAGGTCCCGCAAAAACAAAAGCCGTTGGACCTCAAAGGGTTGCCCTTCTTTCAGCCAGAATACCTCTCGAAAATGATCTTCTTGATGAGAGAGATCTCTCTGTGCTGAGGTGGGCAGATAAATTAAGTTAAAAAATGGAAAATATCAACACACTGCTCAATCCAGCTCCGCGTTTTATTTTTTGGCCGCTCCACACAGCATGGGGGATCTTAGTTCCCCAGCCAGGGATCGAACCCACACCCCCTGCACTGGAAACTTGGAGTAGTTCTGACCATTGGACTTCCAGGAAATCCACCCCCTCTCCAACCTACTTTTTAAAAATACACACTTTAAAAAAAGAAAAAGCTGTCAGAATATTAGCCAAAAGCATTCCCTTTGGTTATGTCTGAGGGTGGGATGACAGAGGACATTCTATGCTCCATGTTTCTACGATGTTTTCATTGAAGGATTGCTTATGTAGTCAGGAATAACAGAGTGTTTGAAAAGGGGAATGGCGAGGGGTTCTTGGGGTCCTTGATGTCTTGAGAAGCCAGGTGGGTTGACAGGCAGGATTCTAGAACAGTTCATTCAAGAGTCTGAGAGACCACTTTCCCCAGGTTGGGGAAATTTCAGCCTTTGGTCCAGGACTGAGTCATCCTGAAGCAGAAAGGAAAATTGAGTGATGCTAAAGAAATCTGAGCACTGAAGAACTGATGCTCATGAACTGTGGTGTTGGAGAAGACTCTTTAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAACCCTGAATATTCATTGGAAGGACTGATACTGAAGCTGAGGTTCCCATACTTTGGCCACCTGATGTGCAGAGCTGACTCATTGGAAAAGACCCTAATGTTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCATCACCGACTCGATGGACATGAGTCTGAGCAAGCTGTGGAAGATGGTGAAGGGATAGGAAGCCTGGCGTGCTGCAGTCCATGGGGTCACAAAGAGTCGGACACGACCGAGTGACTGAACAACAACAGAAGAAATCATCGCTTCATCTCTCTTCTTAAAAGTGTGTGTCTGCACTGCTATAGTTATTAATAAGATGGATAACAAGGACCTACTGTACAACACAGGGAACTCTGCTCAATGTTATGTAGCAGCCTGGATGGGAGGGAGTTTGGGGGAGAATGGATACATGTGTATGTATGGCTGAGTCCCTTTGCTCTTCGCCTGAAAGTGTCACAACATTGTTAATTGGCTATACTCCAATATAAAAAAAGTTCAAATAAATTCCTAACGTGATGCTGTGTCGAGAAGCATACACAAGAACAGGTGCTAGTCTTTCTGTCCAGGAAGTGGAGCCAGGTGGCCAGGGGTGGTGAGGACCAAGATAGAGGTTTCACTCTACCTTTTCTGGTACGTTTTGAATTATAAACCATGTGTATGTATTACCTACTCAAAAAAATAAATAAAATTTAAACGTGAAAATCAGGTACTTTCCAAATAGCACTGTTAAATCAGTGTACCATGTGTTAAATGTACG TCONS_00077701 r 3' 50448 TCONS_00077701 r 3' 57686 EMBV3_27041 TTTGGCACCGACTGGGCTGTCTACATGACCAAGCTGGACGGCACGTATGTTGTCAGGACA Gene GeneID:616377|CDA:XM_002685724:437_cdna Constitutive 1 NULL GeneID:616377 2 GENE CDA NULL cytidine deaminase EMBV3_03914 GTCAGGTGCGGCTTTGTTTACAGACATAGGCAGCTCACAGACCGTATGTCAGGTTACAGC Gene BVV0102_341471 + 0 NULL GK000021.2:34432974-34438145 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121089 TCONS_00119271 TCONS_00121088 TCONS_00119272 TCONS_00119275 TCONS_00121090 TCONS_00119273 TCONS_00121095 TCONS_00121091 TCONS_00121093 TCONS_00121092 TCONS_00121094 2 XLOC_073341 XLOC_072851 Coding TCONS_00119272 XLOC_072851 Coding Coding EDC3 21:34382736-34437854 j TSS89357 3857 1 TCONS_00119272_3 508 7 0.930148592993087 0.00108770845314437 0.00169894371561768 0.000428010030606016 0.00129057248300991 1.70829854726656e-54 3.63161872684955e-06 0.000576315008741825 0.000123947833814584 0.000522626327716524 0.00101184029012154 0.000543514478639662 0.000278906563091753 1.48856377884714e-06 6.16237678425596e-05 3.90017511503468e-09 0.00566082559408528 0.000287889282862942 0.00499745167207196 0.00103229053048863 0.00126481231701041 0.00113608642180842 0.00118218584307548 0.000469858841993834 0.000540849585712579 0.000982062782999956 0.00258591995149776 0.000792196120848762 0.000347282045853428 0.000527807827511497 0.00432258374366565 XM_005221958.1 EDC3 PREDICTED: Bos taurus enhancer of mRNA decapping 3 homolog (S. cerevisiae) (EDC3), transcript variant X1, mRNA. 0.0 6812 100.00 0.978999222193415 NM_025083.3 EDC3 Homo sapiens enhancer of mRNA decapping 3 (EDC3), transcript 0.0 3591 82.06 0.933627171376718 TCONS_00119272_3 sp|Q96F86|EDC3_HUMAN EDC3_HUMAN Enhancer of mRNA-decapping protein 3; 0.0 1006 97.24 0.998031496062992 3 coding 0 0 1 1 -0.0956306892799234 0.504295207154883 0.00655435770017204 0.918944826560286 GGAGACGCAAGGCGCTTCCGGCGGCGGCCGTGGCTGTGGGGGTGGGTGTGAAGAAGACCCTTAGTCTCAGGGTCTTGCGGTGCTTCGGGGCAGGCTTGGTGTGGTGAACCGAGGAGGCGTAGGCTCGGTGGCGTAGAGGTACACTGCATGATTCCTTCTCTCCACGGCAATCTCACATCTGAAACATGGCTACAGATTGGCTGGGCAGTATTGTGTCCATCAACTGTGGAGATAGCTTGGGTGTCTATCAGGGAAGAGTGTCAGCAGTGGATCAGGTCAGCCAGACCATTTCTCTCACCCGGCCTTTCCACAATGGAGTGAAGTGCCTTGTGCCAGAAGTCACTTTCAGGGCAGGTGACATTACAGAATTAAAAATTCTGGAGATACCAGGCCCTGGAGAAACCCAACATTTTGGAGACCTTCATCAGACAGAATTAGGCTCCTCTGGTGTTGGTTGCCAAGTTGGTATCAATCAAAATGGCACAGGCAAGTTGGTCAAGAAGCCAGCCTCTTCGAGCAGTGTCCCTCAGAACATCCCTAAGAGGACAGATGTGAAGAGCCAAGATGTTGCCATCTCTCCCCAGCAGCAACAGTGCTCAAAGAGCTACGTGGACAGGCACACGGAATCCTTGAGTCAGTCCAAAAGCTTTCGTCGTCGGCACAACTCTTGGTCATCTAGTAGCAGGCACCCAAATCAGGCAACTCCAAAGAAAAGTGGCTTAAAGAATGGCCAGATGAAGAATAAAGATGATGAGTGTTTTGGGGATGATATTGAGGAGATTCCAGACACAGATTTTGATTTTGAAGGGAACCTGGCCCTTTTTGACAAGGCAGCTGTGTTTGAGGAAATTGATACCTATGAGAGGAGAAGTGGTACCCGTTCCCGGGGCATCCCAAACGAGAGGCCTACTCGGTACCGCCACGATGAGAACATCCTGGAGTCAGAGCCCATTGTCTACCGTCGGATCACAGTGCCCCACAATGTGAGCAAGGAGTTCTGCACAGACTCTGGCCTGGTTGTCCCAAGTATTTCCTACGAGCTGCATAAAAAGCTGTTGGCTGTGGCTGAGAAGCATGGCTTGACTCTGGAGCGGAGACTGGAGATGACAGGCGTGTGTGCCAGTCAGATGGCATTGACCCTGCTCGGAGGACCCAACAGGCTGAATCCCAAGAATGTTCACCAGAGGCCTGCAGTGGCCCTGCTGTGTGGGCCTCACGTGAAGGGGGCTCAGGGCATCAGTTGTGGAAGGCACCTAGCCAACCACGATGTCCAGGTCATCCTCTTTCTGCCCAACTTCGTGAAGATGCTGGAATCCATTACCAATGAGCTGTCTCTCTTCAGCAAGACCCAGGGCCAACAAGTGTCTAGCCTTAAAGATCTGCCCACTAGCCCGGTGGACCTGGTGATCAACTGTCTGGATTGCCCCGAGAATGCCTTCCTGCGGGATCAGCCCTGGTACAAGGCAGCTGTGGCCTGGGCCAACCAGAACCGGGCACCAGTACTCAGCATAGACCCGCCTGTGCATGAAGGTGAACAGGGCATCGATGCCAAGTGGTCACTGGCTCTGGGCCTGCCTCTGCCTCTGGGGGAGCATGCGGGCCGTGTCTATTTGTGCGACATCGGCATTCCCCAGCAGGTCTTCCAGGAGGTGGGCATCAACTACCACTCGCCCTTCGGCTGCAAGTTTGTCATCCCACTGCACTCTGCCTAGAAGGGCTCTGGGTGGGCTGGACCTCGTAGTCCCCTGCTGCTCCTGACACTGAACTTGACAGCGAACGCCTTAAGGATGTGAAGCTTCATGGACCTGTTGTTAAATTTCTTCTCTTTTCATTTTGTTTCTTTGAAAGAACAGATCATATTTAAAACTGACCTGTCACGTGCCCTGAGCCAGGGAAGGCTTTCCCCTTGGGGGCACGGGGCGAGTGGCAGGCTTAAGTGCACAGTGGCTCCAGGCATCTCTACACTCGGCCCCCTGCATGGTCAGGTGCGGCTTTGTTTACAGACATAGGCAGCTCACAGACCGTATGTCAGGTTACAGCCACTGGGCCTGGGCCGACGCCTCACGGGGTGGGTCAGCCCTGTTTGGGGGTCTGTGCTGGCTCTGGTCCAGAGCTTGTGGCTTTGTCTCCCCTGCTTCCTCCAGCCAAGCAGCCCTTCCTCTGATCATGTAGAACTGGCTGCACTGCCGCTGTCCGCTAGAGGGCAGACTTGCATTCTCGGTTCAGTTTGAGGGCTTTGAGGCCTTCCCTGAGCCCCACCGCAAGATGATGGGGGCTTTGACCCTTTCGCCTGAGCTGATCAAGTTTTATGCTAGGTTTTTTTTTTTTCCCGAGGGTCCTTCCTCGTTTCCACTCCATCACTCTGAGAGGCAGGGAAAGGGGGCAGGGTGGCATCTGAATGGTGTTACTGTATTGGGATTTTTTTTAACTGTTTTTCTGTTGTCTTCAGCACAGGTAGTATAAGCTTATGTTACTGTAGAACCACAGTGCCCATCTTGCCAGCAGTGCCCCCAAATCCCATACTCTCTAGCTGGGGACTGAGCCTTTGCCTAGTCTGGGGCCAGACCCCTCAGGGTGCAGCTTTAATGTTCAGTATTGGGGAGGCCCCTGGGGGAGCCTGGTGCTGAACCAGAAGAGGCTCCCTGGTGCTTCTGTCCTAAGCCACCATTCCCGCCTCCTCTTTGCCTGCACACATACCCCTGCTCTCCTGCCCCCTCTGCCCTTCCCCTGAAATGGTCCCTTGCAGCTGTAGGCGCATGTCCCTCCCACCCCCCCAGCTTTTACAGTGTCTGGGCCTTGAACCCTTTGATGGTCCTCTCTAGATGTGTAGGCTCAGGGCCAGCACCCTGTCTCAAAGATGCCAAAATGAGGCTAGTTCTGGATGAGCTAGCTGGTAGGCCTCAGCCTTAGGAACACAGTGCTGCTCAGATCCTAAGGCACTGAGCCCCCAGATGTTCACAGGCCCTGGAAGTTCCCGAGAGGGGCCCTTGCAGAGGCTTGTGCTTTAAAGCCTTTTTTAGGGCTTCAGGCTTCCTTCTGCTCTGTGCCCACCCAGTATGGTTAAGGGGGTGAGTGGAGGGGCTTGATGGATGCAGGGTAGGCCCTGGTACCCTGGGTTTCAGGATACTTATCACTTTCCTTATAGGAGCATAGCTGGGGCAGATTAGGCAGGGCAGAGAGGGCTGGTCCCTCCTGTCCTCCCAGCCTCCCTCAGATGTTAAATTGTCTCCAGCAGTGGAGGGCACCCAGCGACTGTGAATCCTGTGCTGTGTATCCTTCCTGAACCTCTGCTCACTCTCAGGGCCGAGAAGCTCCTGAATGAGGCCCTCTCTCTAAAGGTGGGGCTGTAGTTTGAGGAGCAATGCTGGGTTACAGGCATTTTAGTAAGCAACCACTCAACAGGCTCTGGCTGCCTGTTAATGCGGTGAGGTCTCCTCATTGGGTCCAGTGAAAAACAAGCTAGAACCCTGGCCCAGAAGACTCTACTTGCTCCATTAAGTCACGGTGACCCTGTGGGTGATGGCCTTGTGTTGAGGGGCTAATGGGAGTTGGTGCCCAAGCCTGTATTTTCTCCCCAGGCGGCACTGGAGCCTCTTCCTGCCCTCAGCCTGGGCCTTCCCAGGTGGTAAAGATAGCATGATTCCTCCATCTTCACCTCTTTTCAGAGGCATCCTACCCACAGTGCCCAGTTCCCACGGGGCCCCAGTCAGGTGGCCAAAACTCATTCATGCAGCTCTTGGGGAACCAAAAACCAGCACTAAAATAAAGCTGACGACAGGAATCCTGTGTCCTGTGGTACATTGCTCTGTGGGCTGCAGTGCGCTGAGGCACTGCATCCCCAGCCTTGGGAACCTGCC EMBV3_13712 GGAGTAAGAAATTCTCAAAGCTGCCGTAGGAATAAAGGCATCTGTGTGCCGATCAGGTGC Gene GeneID:403090|LAP:NM_203435:2_cdna Constitutive 0 NULL GeneID:403090 27 GENE LAP NULL lingual antimicrobial peptide EMBV3_32568 CCAGGGTTACACGCCTGCGGGCTGCACACGTTCAAACCTGGCGGATACTGCAGTGGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11692 CAGACTATCAGCAGCACCTGGATTGGCTCAGTATTTGTGGAGATGGTGTTACCCTGAAGT Gene GeneID:508963|LOC508963:NM_001100328:11_cdna UTR3_Alt 2 NULL GeneID:508963 20 GENE LOC508963 NULL hypothetical LOC508963 EMBV3_00613 GCCCCAATACTAATCCCCCAGAAGGACTGGGGCCTCTTCCTAATCCTACATCTAATAAAC Gene GeneID:100296125|LOC100296125:XM_002691471:340_cdna Constitutive 0 NULL GeneID:100296125 11 GENE LOC100296125 NULL similar to pumilio homolog 2 EMBV3_23561 TTGTGTTTCGACTGGATTGTGTCCCTGTGCTTTAGACTGCAGAGCTGAACCCCTACTGTG Gene BVT0102_017556 + 0 NULL GK000004.2:49304528-49526483 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05910 CCTTTTGGAAGAATATACCCAGCTTGCCAGGGTCAGTAGTGGCCACCTACAGGAAGACGC Variant GeneID:504199|NIT1:NM_001038023:224_cdna 432^535 1 EMBV3_00775 GeneID:504199 3 GENE NIT1 MGC133723 nitrilase 1 EMBV3_20291 GCAGCAGAGAAGATCAATTAGAACTCGTTCTGAATCGGAGAAATCCACTGAGGTTGTGCC Gene GeneID:513054|WHSC1L1:NM_001075595:59_cdna UTR3_Alt 2 NULL GeneID:513054 27 GENE WHSC1L1 MGC137890 Wolf-Hirschhorn syndrome candidate 1-like 1 EMBV3_33723 GTCACATGCAAGGCTGTGGCAAAGTATATGGCAAGACCTCACACCTACGGGCACACTTGC Gene GeneID:540741|SP1:NM_001078027:57_cdna UTR3_Alt 2 NULL GeneID:540741 5 GENE SP1 NULL Sp1 transcription factor EMBV3_30217 TGGCTTATCACTCGGGCTACGGAGCCCACGCTGCACCGTTTTGTGTCCGTGAACAAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34879 GCTGGGAAAGATTGAAGGCACTGACTCAATGGACATGAGTTTGGGTAAACTCAGGCACTG Gene BVT0102_303733 + 0 NULL GK000005.2:78637342-78647084 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22010 ACAATTTTCAACCTATCAGAAAGACAAACAAATCACCAACAACAGGGGACGGGGCCATGG Gene BVV0102_066062 - 1 EMBV3_30579 GK000029.2:40590844-40600099 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35666 AGGACATCGAGGGTATGTGCCAGCAGGAAAACTGGAGGTGTACCATGTGGTCCCCAGTGA Gene GeneID:526631|LOC526631:XM_002689287:116_cdna Constitutive 0 NULL GeneID:526631 7 GENE LOC526631 NULL similar to vav CG7893-PC EMBV3_29389 ACACTGGAAAAAATATAAAGCAAACCACTGCTATAAGTCAATTAAACTGCCTCCTATCAC Gene BVT0102_363678 + 0 NULL GK000024.2:34760608-34811559 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140098 TCONS_00140101 TCONS_00140094 TCONS_00140102 TCONS_00140097 TCONS_00140095 TCONS_00140099 TCONS_00138837 TCONS_00140096 TCONS_00140100 2 XLOC_085062 XLOC_084746 Coding TCONS_00138837 XLOC_084746 Coding Coding - 24:34806262-34811557 - TSS103962 5295 3 TCONS_00138837_4 85 1 0 2.3985765382739e-05 0.000782151375722677 0.000164843370942699 0.000399829504670847 4.83368719367187e-16 0.00044592919809215 0.000333778765454174 0.000457824655974937 6.5619411585077e-07 3.38925069800416e-26 1.41479122813693e-21 5.25957622221671e-05 9.46453377347263e-17 5.70127572590811e-18 1.68457537996344e-05 0.00467750665985346 0.00450116380698778 0.0002986715997735 0.000605165049234415 1.01437549627251e-10 1.46943172927284e-41 0.000796823494756969 0.00141860530770637 0.00226467252324009 0.000982533704226272 0.000988883315956098 0.000466193073352372 0.000349492090833203 9.51482922123079e-18 0.00165918351427139 NM_020774.3 MIB1 Homo sapiens mindbomb E3 ubiquitin protein ligase 1 (MIB1), mRNA. 0.0 2067 77.67 0.518413597733711 0 coding ATCAGATTTTCTAAAATGGGTTTATTTTAAAAACCTATACAGAGTTTCAATTTAATAAAAAATATTGCCAGGAAATGACTAATTATACAGCAATAGAAATAAACCCCCAAATACAGTTAATTAGAGGTTATAAAAAAATTAATTCACAATTTTAAAGGTGGAATACATATGCTTTTTTTTTTTTTCAAATAAACAATTTTAAAAGGTTTTTGTTTTAGATGGTTTTCCTCTTAAACATCTGAGTTATATACATACTTAGTTTTTGAATTAGACAACCTCCCAGTAACTTCACAAATAAGTACTTCTATTAACTTGAAAAATAAAATAACCCACAAACCCTTCTATTACTGATTTAGTCACAAAATGCTAACAAAGTCAAGTAAATCGTTGTTTTAAAATGTTTACCTCTTGAAAATGAAATCTACATTGGAGTTGTGAAGTATAATAAACTTTTTATAGAAGAAGTTGAGTCTTTCGTGACTAGTAGATTTATTTTCTATCAAGTTTATCCTTTAGACTACTTTTACAATATCTCTTAATCCTGAGAATGTGAGGTGTTAAAATAGGAAAACCTTTGGCCCCATTGATAGAGAGGTACCTTAAATGTAAACAATTGCAATGACAGCCTTCTAGACATGAGCACCCATGTCTTGTATAGAGTTGGAGATATAGTCCCTTGTTCCTCAAAGACATGATAATTTCCTTCCCAATAAAAATATTTGATGTATTGAGATTTGTTTTCAAATGCCATAAAGAATCAAAATTCATGTATACATCTAAGGAGAATAGTTTTAAAAGATCAGCGAAAAGCATTACATAATGATATTACATCATACACTTTATTAATGGTAAATGTTTGCATTTATTTTTAAAAGCTTAGCTCTTGCTAAGCACTTTTTAAGAGAAAGCTAATAAATGAGAATCATTTGCCATACAAAAACTATATTCACAAACAAGACTTTAATCAAATGAAAGCTAAAAAACACTGGAAAAAATATAAAGCAAATCACTGCTATAAGTCAATTAAACTGCCTTCTATCACTAAATATAATGTATCTAGAATGACACAAGTTCACTGAACAGAAAATTCTGTGGATTCAGTCTAAGTAAGACCAGCGTTAAAGAGTGTCATGCAATTCATGATTTTCTTAAAAAGAAGTTTTTTTAACTGAATCATTTAAACAAAAGGTCTTCTTTTCATTTGAGGGGAAGACAATCTGTTTTCCAAACAGATTCTCCTTTTTTGCTAAAATAGCAAAAGGTATGAATTCTAGCTCCTCTTCCCAGGTGCTACTGATACAGGACTTGGCATAATGACTTAACATAGAAGTACTTTCCTGGTAACAGTGTCATGGCCATAAATAATCCATTAAAAAAGATGATCAAGTGCAAATCTAAGAAAACTTCCTTTAAAGAATTACCCAAACCCAGCACACAAGCAGTATCGCTATTACATGGGCTAAGAAATACAACTTATCAATGTGTGTATGATGACAAATGCACACCAAAGACCACCTTCTATAAAGTTTTAGTAGTGCTGCCAAGTTAATAATTCTTTCAAGGCACTGAAGAATTATGTAGATGGATTTTCCCAAAATATAACTAACAATTGCTTAAACTGTTAAAAAGCCCTGAGTCAGAACTTTCAATAACTTCCTGAAATTATTGATTTCAGATAAAATGGCACATTTGTTTATTCTATAGAAAATTACAAGACCCTTTTGCTTTTTGGAGGGAAGAAGTCATGTTTATGAAACAAAACTAAATAGACTGAACAAGAAAAAAAAATATTCACCAATATTATCTCTCTTACACATTTCATTATTAATTGTAACTTGCAGTTACGGATTTAGGCACCAAATTGATGTGGCAAGTCATCTTTGCTTCCTCAACAAAATAAAAATCTCCATTTTTAACCTCAGGTTTCCATCTCCTCCTTAGTCACAAATATGAATAAACGCTGGAAAACACTCCGGCAGAAAAGGAGGCAGAACGTACCCATGCAGCAGCTTACACTTTAACTCACCAGTTCTACTATCTACTTCTTATCTTTATGCTCTAGTTTCACCCACTACCAGCCACTTACCAGCAAACTGAGGCTCAACCTAAAATGTCCCCCTCGCTGTAGCAAAGCAATGTATACATGAGACAGCATTAAATAGCTTTTCCTCAATTTTAGTGTTTTAAAGAAGTACAACTGTAATTAATACTGTTATAGTTTTACATCTATGTAAAGGTTCCAAGGCTATACATGATTCATCAAGTAATATCAGTAAGTATTCCTATTATAATACTCAAGCAAATAAAATTAAGATGCCTTTTTGAGAGGAAAAAAACATCTTGAAAACAGTTAAAAGTAGACTTAAAGAAAACTGACATTTTCAACAACAAGGCACATAAAATTTGTGAAGTTCTAATACCTTGTCAATTAGTATAAATTCAAAGCTAACCTAATTACAATGTTTAAAAAGTGTGCTTCTCCCCTCTGACTCAAAATGAAATAAATCCTTCTAATTAACAGATATTTAAAACCTACTCAATTACGACTGATGATGACTGGGAGGGAGAAGAGAAATTCTGTCTTCCCCAAACTTGATTATTCACCATCACTGTAGGTCTTGCAAATACAAACTCTTAAGATATTCAGGTGTTTCTCCATTTATATTTAATCAAAATGCTATTCCACTGGAGGAGGGAGAAGAGGACTGCTGCTTGGGGGGTACAGTTTCAATTTGCAAAATGAGAAAGGTGAATATACTTCTACAGTTACTGCTTTGGTAAAATCTACATGATCTCCATTTTTCTCTAAACTCAAAAACTGACTTTTCTTTTTCTACTTGCTGCAATCCCTATCATCCCCTCTATCCAATTCCATCACCAATTCTCCAAGTTCATAAGTTTAAATAATTCTTAGTCCAAAAGGGTCCAAAATTCACAATAAACAAAAAACAGCATTGGGCAACACATTAGACTACAATACAAGACCAGCTATTTCTGCCACGTAAAAATGACCTAGCAAGCTTTGAAATTTGAATTGGACACATCTTAAGCAGCATGCATTGCAATTTGCTAAATGCTCTTACAGGCTAAAGCCATCAAAGACATAAATTTAAGAAAGTTATTTTCAACATTATCAATTAATTTCGTGCCTCAGTAGCCAGATAGTCAATCTGCAATGTTTAAATTTACAATCAAGCATAATTTGGCCAGCTAAACTAAAACACTTATGTAATATAATATTCCAATACTAATACAAAATGACCTTCTCTTGAAAAACTTCCTTGCTCCCAACAAAATGAAATATGTTTATAGTTTAAACAGCAATGTTAAATTATGGGAAGAAAAACTATTAGAATAGCACCATCTGGTTAAGTTGTGTGTATGTTTTGGGTCACAAAGCTGACAATATTAGAATAAAAGAAAAAATATGGTAGAGGTGAGAGGGTACAGAGAGGGAACCCTAATGATAGCTCTTCCAAAACATTAGGAAGAAATGCTATCAGTATCTTTAGATCCCTTCTTTTTGAAAAGAATACTTCAAATACGCAATGGCTGCATGATAAATTCTGTATGTGCTTAGAAGATGACAATTTTTTCACCGTGTGTATCTTGCTCCTGAAGCCCAATAAATACGTTTTTGAGTGAATGCATGACAGTTTTGGTGGTGGTGTTTTTTTTTCTTTCCTAACGATTCTAGGAAAAGCAAAAGCTCCTTCGAGGCACAAGATAAAAAGATGATCATGACAAGGACACGTCCTAACTGGGAGTACTGCTGAGACATATGATAAGAGGTAGCCATTTCATAGAATTAGAGGAAAGTCACTTAAAAAATGATGCTCTTAAACTTATTCTCTCTCACAAACCAAAAATAAATTTAAAATTATTTTTCAGGTGCTTAAAAACACGAATGAAAAAACATTTTCTTTTCACTAGACAAATTTCGAAGTGGTACAAATGGAGAAAATCCACAAGTGTACACCACTACAGTTACAGTGACTTTGTGACTTTTATAACAGTTTACAGGGTATTATATTTTTAATATGGAGGAAATAAGCTAGTCTGGAAGATGAAACTGCCTTTTAGGGATGTAAGCTTAAGCACTGTAGCTCAGAAGACCTATAACAATAAGTGAAGTAAAGCTCCGGACTATACAATTCTCTGGTTGGTCACGCTAAGCACGAGTCAGCCAGTGCTCCCTCCTTACAGTCGGCCTTGTGGAAAAGAGATGGGCAGCACACGGAGGAAAACCCTGACTGACACTGTTTACAGATCTGAAAGAAAATAGTCTTGTCTCTCTATGTGAACATCACTGGACAGATGTTCTTTTTATAACTTCAAAATATGGCTTCAACAACAGCCTCAGTAGCCTGTTATTAGGTAACTGAGTAGAGTCAATATAAATTTTCAAATTTAAAATTTATAAAAATTTGTACTGTTCTAAATGGTAAGTCACTCCACTAAACACAGATATGGAATTACCGAGACTAGAAAGGCAGCAAAGTGCACCATTGCTCTCACCAGGGCTTGCAGAGGCAGCAGGCATTAATGAGCCAGAAACATGGTATTATGAGGGCTAGAGACCTTGTACTTTCAAATTTAATTGTTACAGCAGGAGAAATGAAATAAGAACCAGAGTCAAAGGGGAAAAAACCCACAAAAAAGATACTTATCCTTAGGAGTCAACTTATACACATATAGTAGATACTACTGTAAACAGGTGATATTTGTATAATCTAGCAGCAATGAACCCCAAAACACTTACTTATGTGTATATTCATTCCAGATGTTGAAAGAGAAAAAAATAATTAGATGCTCCAGAATAAAACAAAACAAAAACACAGATAATCAGACATATTTCTGTAAATGTCCTAGTCATTCTTTCTAAATTCAGTGTCTATCATCAGTTATTTACAAGGTCTTGGATATTGCTGACAGGTTAAATAATATCCCCATTGTTAGGTATGATGAGAGACTGTTTTGTTTATAGTCAGTTCTACTATCTAAAAGATGATGGAAGCGAGGCCTCTGAGGAAGACAGAAACAGTGACGGTGGCAGAACTGACGCAGAGGAGAAAGGCCATCGCCTCACTGAGGACGGTGCTTTTCCTTCCTGGGTTCCTGCTACTCAGCACTTTGGGAAAGGTAAACTGAACCCCGGGGGCCCAAACAGGGCAACACCATTTCACTGGTCAGATCAAGCCTGAGTAAGTGACCACAGGGGAAACTGAGGCCCGTTTTTCACCGTCAGTTTTTCACAAGCTGGCTGAACAGTGTACAAATTAATGTAACAAGGGC TCONS_00140102 r 5' 0 TCONS_00140102 r 5' 0 EMBV3_34791 AGGCTCAGGAGGAAGAAGTGGGAAGGGGATCTGTCCAGGGTTTGAGTTTGGATGACATGA Gene BVT0102_118914 + 0 NULL GK000008.2:22878764-22909808 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227114 1 XLOC_138166 NonCoding TCONS_00227114 XLOC_138166 NonCoding NonCoding - 8:22899548-22902293 - TSS169625 2745 1 TCONS_00227114_3 118 0.358469945355191 1 0 0.000160070049873972 0.000355271556302785 0.000617705474315907 0.000107872759316206 0.000404402811759836 4.35905849764208e-05 6.69080108847432e-05 0.000113376592901953 0.000236754982667653 0 0 0 2.31585309574192e-47 0 0 0 0 0.000182811803803515 0.000637415199900829 0.00078043029441893 0.000315185155860179 0 0 0 0.000328520133938923 0.000604884251200998 0.000312133277580158 0 3.53705146962001e-06 0 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 0.0 841 86.97 0.256466302367942 0 noncoding 0 0 0 0 0.018606826074576 0.905958368473694 0.0290062090624224 0.668920644396297 CTGCTACATACTCTTGAGACTGAAAAAAGCTGGCTTAAAACTCAACATTCAGAAAACTTGGATCATGGTATCTGCTCCTATCACTTCATGGCAAATAGATGGGGAAACAGTGACAAACTTTTATTTTTGGGAGCTCCAAAAATCACTGCAGATGGTGACTGCAGCCATCAAGTTAAAAGATGCTTGATCCTTGGAAGAAAAGTTATGACCAACCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGTCAACAAAGATCCATCTAGTCAAGGCTATGGTTTTTCCAATAGTCATGTATGGATGTGAAAGTTGGACTATAAAGAAAGCTGAGCACCAAACAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTTCAAGGAGATCCAACCAGTCCATCCTGAAGGAAATCAGTCCTGAATAGTCATTGAAAGGACTGATGCTAAAGCTGAAACTCCAATACTTTGGCCACCTGATAAGAAGAGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTGGGAGGAAAAGGGGATGACAGAGGATGAAATGGTTGGATGGCATCACTGACTCAGTGGACATGAGTTTGAGGAAGCTCCGAGAGTTAGTGATGGACAGGGAAGCCTGGCGTGCTGCAGTCCATGGGGTCACAAAGAGTCGGACACGACTGAGCAACTGAACTGAACTGCTACATACTGAACTGACCCAGAGGATGTCTCGGAATATGGGCAGACCAGGATTGTAAGGGCTCTGCAGGTATGTAGGGAGGTGAGGTGTATGGTTAGGCCCTTCAAGATGACTTCTCTTGCTCTTCCTACATCTCCGACTAAACAGGTCCCTGCGGACTTACACTCCACTCACAGGAATGTGCTTGCCCTTACCTCACCTAGTGGCTGTTCTGATACTTAGGCCAAAAGGGCTCCCCATCTGCTAGTTCCTAAAAGGTAAATATTAGCCCTGGCGATGGCGGTAACTTGAGTTGTTTAAAGGAAGGGCCCCATGCTGCTGGTTTCCTTAGTAACTGATGAGCCAATCTGATGGAAATTCTCAGAGTAATAGTATCTTCCTCCCTCAAATAGGTGAGATTGCCTGCATTCCACTGGGTATTGCTGCAGTATTTTGCTTAAGATTCGCTTTCCATTTAGCCATTGATCATTCTGTGTTTGTGCACATACAAGAATTGGTGGTCAGTAAGAGTTGAACACGATAGAAGCAACTGAGCAAGCAGGAGGTACAATGCAACAGAAGCATTCTCACATTTAAAGAGTGAAGTGGATTCAATTTGGTGAGAAATGGCAAAGTTTCCAAGGAGCCTGTGGGATGGCAATTAGCATTGTTGGTATCCTTGGAAGATTAAATCTGTCAGTCTTTTGCTCTGTGGTTTTACAACTTATGCTCTTTGAAGTGGAGACTATGAAATCTTTTATCTTCTCAAAGTTTCAAAACCAGTGCTTTTGATGATATTCTTTCAAGGGACTTGGGTAAAGATGTGTTCACAATGCTGAACGTTTAATGTACAATCTATCTATACTGTGGCTATGAGAATGTTAAGGACACATCTAAACCTCCAGTCCTTTTTTCTTAACCTATTAGTTGAAGGAAATAGAGCTTTTCTCAAATTCTTCAGATTTTTTTTGCATAGTTAAAAATGTTACTAACACACATAAAACGTTGCTTATATGCATAAAATAGAAGAGGCCATGTTCCACCCTCACACCACCCCCCTCCCCAGAAAAAATTAGCACCAAATTTTCTTCTCTCTGACCACTCAGGGAACAGATGGGGCTGGAAGACTGCTAGTTCTGCACGCTCTCCTTTCCTGGTGGTGGTATGAAGCCCAGCAGCTACAGACCCCTAGAAACAGCTCTATAGTTAAACCAAGTCAGGGTTTCTTTTCTTTTTTTTTTTTTTGCAGTGAGAGTCCTCTCTGTGAAGAAGTGTGAGGAGGCTCAGGAGGAAGAAGTGGGAAGGGGATCTGTCCAGGGTTTGAGTTTGGATGACATGATTCTAAGGAAGTCAGGGAGGAGGGTGTCAGTTCAGGGTCAAAATGTTTGAGCTCACATGAGCTATTTTTCTGGAAGTCCTAGGAACACAGTGGAGCTTAGGTAGTCCTTGCTGCTTTCTTACGATCACTCTAAAGCTGAGAGGGTTGTGTTGTTTGCCACATTTCTTTAGAAATGTTAGGAAGATCACCTTTTGTCCCCCAATGCAAAGGGATTAAAGAGAAACCTGTTTCTGTTTTTCCCTGGAAAATGTAATAGATAGATAAGGAAGGCAGTGTATGAAAACCCACTCACTATATGAAGCTTTGCATCTGGTTTGGGAATCAGGATGTTTCTCTGTTGTACCAAAGTGGCTCAGATCCTTCAAGATGATTAGAAATGTATGGGACAAACATAATAAATCTATGATGTGAGAGAACAGTGTTTCTCAGCATTATATTCTTGGTATTAATAAAAGCAGTTTTTATAAGTCAGCTTGAGTAGAAGAGAACTGTGGACAGTGTAGTAGAGATAAGGTCTGGGGTGTAGTCATTCCTCAGGGATGGATGAAGGCTACTCCTAAGAGTTAAACGGGAGTAGTGTGGAGATTTTTCTTTTGACCCTGCTCTTCTGAAAGACAGAAGTCGGATGGTGAAACAGTAAGATTGCTGCTGTCGTTTAGTCACTAAGTCATGTCCAACTCTTTTGTGACCCTGGGGACTACAGCTTGCCAG TCONS_00224640 r 5' 7516 TCONS_00224640 r 5' 7516 EMBV3_25519 TGGCTGACCACCCATGCAGCTGACCTTGGCACCAACATAGAAAGAGTTGAAGAAAGACTG Gene GeneID:526865|PVR:XM_002695088:524_cdna Constitutive 0 NULL GeneID:526865 18 GENE PVR NULL poliovirus receptor EMBV3_10166 CAGGAAGCAGACCCCCACAAGATAAAAACTGCTGACAACAAGAACATAGACCCTAGACTG Gene GeneID:617215|PTPN18:NM_001078069:19_cdna UTR3_Alt 2 NULL GeneID:617215 2 GENE PTPN18 MGC151912 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) EMBV3_40374 CAGAGGACACGGATATCACTGGAGTTCGGCTCTAAGGTTCCAACAGGCAAGGTGACCAAA Gene GeneID:617881|F13A1:NM_001167894:14_cdna UTR3_Alt 2 NULL GeneID:617881 23 GENE F13A1 NULL coagulation factor XIII, A1 polypeptide EMBV3_08708 TGGAGGTAGGATAAAAAGAAAAGCAAGACAAGTTGCAGAGGACCAGCTAGGCGCGCAGAG Gene GeneID:100297037|LOC100297037:XM_002692169:77_cdna Constitutive 0 NULL GeneID:100297037 13 GENE LOC100297037 NULL hypothetical protein LOC100297037 EMBV3_36115 TTCTCTGCCCAGCAAGTGGTTACCCAGGCTACAGCTAAGACTCGTTCTTCCCAGTTTGGT Gene GeneID:281010|ARNT:NM_173993:13_cdna Constitutive 0 NULL GeneID:281010 3 GENE ARNT NULL aryl hydrocarbon receptor nuclear translocator EMBV3_08117 GACTCTCCTGTGTCGCCTGCCCAAGCGGCCTCTCCATTTATTCCAGTAGATGAACTTTCA Gene GeneID:539712|FAM122A:NM_001101196:26_cdna Constitutive 0 NULL GeneID:539712 8 GENE FAM122A NULL hypothetical protein LOC539712 EMBV3_36113 GAGTTACCGACCTGGCGCGTCCCACGAACGATATCTGGGAGGCAATTACATTGCTGTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27858 ATCATTATGAACTACTCAGTCAAACATCCTGCTCCTTACCCAAATGGGTGGTGAATAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26916 TCCCCGTCTTAGTAATTTGAGGGCTTGGCTGTCGCAGGTCGTCTCCTCTTTGTTTGCCTT Gene GeneID:519337|LMBR1:XM_002687057:178_cdna Constitutive 1 NULL GeneID:519337 4 GENE LMBR1 NULL limb region 1 homolog (mouse) EMBV3_29642 GGTGGGCGAGATTGGTTTTGACCAGTTCTACATGCTGGTGTGCATACTGCTGGCACAAGA Gene GeneID:618333|EFCAB9:XM_002696269:67_cdna Constitutive 1 NULL GeneID:618333 20 GENE EFCAB9 NULL EF-hand calcium binding domain 9 EMBV3_30244 TTGGCAAACTGGATGTCTCATTTCAAAAAGGTTTCGGAATTGGTGAAGCAGTACAGACGA Variant GeneID:615890|GDPD1:NM_001076400:57_cdna 474^592 1 EMBV3_09708 GeneID:615890 19 GENE GDPD1 MGC134023 glycerophosphodiester phosphodiesterase domain containing 1 EMBV3_29561 TGCATTAGACTTGAGATGATTTCGTGGTTTGTTTCTGTGTGGTATGGGAAACTGTTGGTC Gene GeneID:519943|LOC519943:XM_002692949:41_cdna UTR3_Alt 2 NULL GeneID:519943 15 GENE LOC519943 NULL similar to CG4452 CG4452-PA EMBV3_13729 GACTGTCAGAGCCTTGGACATCAAGTCTTCATATTACAGTGCACCTAGCAGGGAGGAATG Gene BVT0102_231618 + 0 NULL GK000011.2:67740413-67752711 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29895 ATGGAGTATATGGATCAGAGTGATGACCGCCTGAAACCAGAAGCAGACACCCTCCCCCGA Gene GeneID:521015|HEPACAM:NM_001031759:23_cdna UTR3_Alt 2 NULL GeneID:521015 29 GENE HEPACAM FLJ25530 hepatocyte cell adhesion molecule EMBV3_12848 TTCTAGCTGCTCCTGGCAATGGTGAATTATTATACATATACATTAATGTTTTCCCAGCCC Gene BVT0102_161611 + 0 NULL GK000010.2:44842194-44879975 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013699 TCONS_00013696 TCONS_00013712 TCONS_00013707 TCONS_00013706 TCONS_00013711 TCONS_00013697 TCONS_00013700 TCONS_00013709 TCONS_00013704 TCONS_00013698 1 XLOC_008186 Coding TCONS_00013706 XLOC_008186 Coding Coding GNG2 10:44682215-44844985 j TSS10111 3403 3 TCONS_00013706_1 71 4 0.97911764525186 1.1622040670881e-11 7.97325541290665e-23 1.46155975173485e-05 5.03950457251981e-31 0.000143976036984035 4.03037821043411e-06 5.16574216301585e-06 4.32113629606562e-14 1.29652941964151e-11 7.30927797524947e-09 2.73075296666477e-05 2.47527054058181e-74 0.000121436784956971 0.000130356071185945 7.78306399182627e-05 0.00202896036928498 0.00296460940178568 0.00261449641991059 1.8447560419528e-22 6.34314372138996e-35 1.30674310325354e-05 0.00121579342378325 0.000557969167805614 0.000171367507342159 2.43395407218882e-47 2.8475046445165e-06 3.29128371022878e-05 1.99618582189969e-45 8.94126701779566e-06 1.60565313808959e-10 XM_005211654.1 GNG2 PREDICTED: Bos taurus guanine nucleotide binding protein (G protein), gamma 2 (GNG2), transcript variant X1, mRNA. 0.0 6123 100.00 0.997355274757567 NM_053064.4 G protein Homo sapiens guanine nucleotide binding protein (G protein), gamma 0.0 2091 79.06 0.724360858066412 TCONS_00013706_1 sp|P63212|GBG2_BOVIN GBG2_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2; 7e-46 144 100.00 0.985915492957746 1 noncoding 0 0 0 0 -0.963486135413533 0.279868373940975 -0.0399460517926744 0.515222974113636 GATCTGCCAGTGAGCCTCAGGCTTTGGGAATTGAAGAGTGTATCTGAAACCTACCCAGCATTCCAATGGCCAGCAACAACACCGCCAGCATAGCACAAGCCAGGAAACTGGTAGAACAGCTGAAGATGGAAGCCAACATCGATAGGATAAAGGTGTCCAAGGCAGCTGCAGATTTGATGGCCTACTGTGAAGCGCATGCCAAGGAAGATCCCCTCCTGACACCTGTTCCGGCTTCAGAAAACCCATTTAGGGAGAAGAAGTTTTTCTGTGCTATCCTTTAAGTCTTCAGGAGGAACCTGAGGAGTCTCGGGGCTCCAGGGACACTGATGTAGAGTTTTTAGCAAAGTGGGCGCCTTTCTAGTCCACAGCATTTAAAGAGAGGGAGGAGAACCATCCTGGAGTCTCCAGGCTTATGCATGTTTAAAGAACTGGTCCCCTTTATGAGTATGAAAGCTGATCCACACCCCAAGTTAAGAGATCTGATGTCTGGAGAACTGCCTAGAGGAGGGGAATATGTAAAGATAAAATTGATGTCATTTCTTTCCTGCTATCCCTCCCCAAACCTTATGTTTCTGCTTCATATTTAAAAAAAATAAAAATTAAAACAGACAGCTGTCCTGAGCTCAGATATGTATGACCTTCTTGGAATGAATATTGCCTTTAGAATACCCTTTGACAAGCTGAGTCGCCCAGTGTAGCCATGGTTTGGTTCAATGACGTTGATGTTTCGTCTTTGTTTCTTTTCTTTTTCCCTTTTCCCCCACCCTTCCTTCCACCCCTCTCCATTAGAGTAGTGAAGAGATAGGCTGGATTTGTCTGTAAGACTGAACTCGAAGGATGAGCACCCAAAGGGTTGAGAGAGGTGTTCCCCGTGGTTTATCCTCATGGTAATAACAACAACAAATGCCGGTTGTCTGTGTTCTTTGATCACTATTCCTAACATTTGTACATGATAGCTTTGATTCTGCAAGTAAAAGTAAATCATGTGTTGTGACTGGTGCTTTCATATATTTGTGACAGTTTTTGAGTAATACTGCATGAAAATGTCCCCATGTTACATCCATTCAGAAGTTTTGTTGTTTTACTATAAAGTTTGGAAAAAGAATAAAAGAGAAATAAAGCTAGGGAGGACAAGACTCAGTATCTTGAAAACTGAGATGACTTCAGAGCCTTAGCCACGCCTAAAATACCTCCTAGTTAACAGAGGCGTCAGTGCTTCTTCAACGTATTTTCCAGAATCCAAAGCATTTTGATTTGAACCAGGATCCAGGGCAGCACACGTAGCAGCAAGCATCAGAAGCACAGATTCACCTTGAGTTGGGAAGTGCTGTGGTCACAGAGTCAGAGCAAATTCCCTTTTTCCCTGAGTCGCCAAAATTCTAGAGTGAAGAAGGCTTTCTGTGCTCTTCTTAACAAGAAAAAACATGGCCCTCATTTGTTCAAGTATCAAGAGGAATAACCCTTTACTCCAAATCAAATCCACTCTCAGAATCCAGCTGTTCACATGCCAGCAAGGAAGGGTCAGGTGCCACCCCAAGCAGCTCCACCAGAAGCAGTTCTGGCTCTTTTTTCCACTGAGATAGCCTTTGTTTTTCACCTAAATTCTCAATAGAGTCTTTTCTTTGTGTTTGTTCTCCTGTTTGTTGGTTAGAGTCTCTCTGCCTTTGTTTACAACTTCCTTGCAGCTCTAGCCTTCTCTTCCCAAGAGATGTGTTGAAAGTGATTTTTTTCTTTGTGGCTCCAGTCCACCAGTAATGGGAAACTTGGAAGTCTTTCTCACTTTTTTCAGTGTTGTTTCTAGGCAGATGAGGGCTCTCTTACAACTCTTTTTTTATTTTGAAATTCCAAAAGACGATTTCTGAATTAATTTTATTCTCTTTCCATTCTCTTCCTCCCATTAAAAAAAAATAAAGGAGGGCAAGGAAGGAAGAAAATAAAAATCTGCCCAGGGATGGATTTTGAAAGAAACTTGATAAACACTTTGCTTAGCTTCTTGTATGGGGATGAGGGTAAAACAATAAATACATTCAATTAAAACTCATATCTGGGGGGGGGGGGGCAGGGAGACTATTAAGACATTGTGAAATTCATGAATGCACTCCTGTAACCAAATACTTCTGTTCAGACTTTTGGATTTTGTTACAGTCAGTGGGATTCTGATGAAGATTTAGTGGGGGAAAAACCCTGGCAGAGTGTTAAACTATAGTATTGTACCATTGGCTTACTAATACTGTGGAATCAACTAAAACCCAACCATATTTTTAAAATAAGCCAAAACATGAATTGAATATGTGTTCACATAAAAACAAGTGTGAATAAAGCACTCTTTGGTGGTGATTAAAGCATCATTGTAAGACCCTGATATTTTTTATAATCCACACCATTTATTTTTCTCAGAAGGAGTCTCTATATTTTCATGTAAAGCTAGATCTTTGGAGCAGTTAAAATGGAATTAAAACTCATAGGAATACAGCTCTGTTAATTAAAAGTTAAGGCAGTGTCAAACTGCATGTGACCTTGTTTATTAAGGAAGAAAGAAGGCAGAAAATACACAGGTATTCTGAAATTAAGTTTAAGAAAAATGTTTGGCTCATTCATAATTTCATGTCCTATAAAAGGGAATTATAATCCCAGAGTTTTTATATGAGTTTTAACTTATTGGTATTTTTACTTGTTAATGGGGAAATAATCTTTTGATTACTTATGCCTCTAATGAGTTTTAATTCTTTTAGAAATTTAACAATCATTTTCACCAGCATAATTTTATCTTAAGGGGTGACTAATAGGAAAGCTTAGCTTAATTAGTCAAGGCCCTAATTTATGTATATATTGGGTAGTAATGAAAAATCTGCCATGAAATTCATTAAACAGTAATAATAACCCTCTACTTAGAATGCAGACTCTATTAAGGAAAAAACCAATCTTGTATCATCCTCAGTATTAAATCTTTCTTCTTTTTTTCTTTCAATTTTAAACCAAGTGCTATTTAAGTCAGAGCTTGTGAGTAAGTACTTTGAACTGAGGCTAACTTTGCTCATAATATTTGAAAGAGATTGCTTACCAAGGAAAAATTTAAAACCATTTCTCTGTATACTTATCACAAAAAGAATTTTGAGAAATCAAGCAGGCTATCTTATGGGATTTTTTTGTACTTTTTTTTTTTTAATATTTGCTTCTAGCTGCTCCTGGCAATGGTGAATTATTATACATATACATTAATGTTTTCCCAGCCCTAGAACTGTTCACATTTTTTCCTATATAAGATCTATGGAGTATATCTTTCAAAGAGAGAGAAATACAGAAATGTTAAAGCAGAAAAACCTGAATGTGATGTGTACACTTTCACCCCCTCATAGACAATGTATTTGTTTTAATAAATGGAATTTTCAGATTCATTTCCATA EMBV3_25043 TAAGCCGAAGCCAGAAAGCAATCCAAGCCTTACAGTTGTCCAATAGCTCAGGGCCAGTTG Gene BVT0102_059837 - 0 NULL GK000030.2:16019606-16113421 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246383 TCONS_00246386 TCONS_00246380 TCONS_00246389 TCONS_00246390 TCONS_00246392 TCONS_00246374 TCONS_00246387 TCONS_00246388 TCONS_00246391 TCONS_00246378 TCONS_00246375 TCONS_00246397 TCONS_00246373 TCONS_00246393 TCONS_00246396 TCONS_00246394 TCONS_00246379 TCONS_00246395 TCONS_00246382 TCONS_00246384 TCONS_00246377 TCONS_00246400 TCONS_00246381 TCONS_00246398 TCONS_00246399 TCONS_00246376 TCONS_00246385 1 XLOC_150969 Coding TCONS_00246388 XLOC_150969 Coding Coding MBNL3 X:16104141-16149664 j TSS184723 8363 1 TCONS_00246388_2 251 7 0.816440402442775 2.02489786012023e-31 9.02612705518854e-31 1.84805734454593e-14 3.22674304563425e-07 2.00682800842177e-19 7.17744029927359e-09 1.56558170289973e-08 1.25596630819197e-14 0.000212279173655594 0.000526355549344948 0.00158065345757938 6.78473553934763e-24 0.00017866575535707 4.61368183371953e-06 1.61653472272468e-05 0.00485577799941223 1.334233534868e-16 0.0105294126043455 2.59348119958674e-06 4.09250305251598e-05 3.0771982537601e-06 0.00235127193865548 0.003305210781947 0.00312632390600528 0.000216709032851673 0.000361198497217809 2.88488462015765e-55 0.000916396403476682 0.000140454201640782 0.00159828420423554 XM_005227517.1 MBNL3 PREDICTED: Bos taurus muscleblind-like 3 (Drosophila) (MBNL3), 0.0 1.336e+04 100.00 0.885806528757623 NM_001170702.1 MBNL3 Homo sapiens muscleblind-like splicing regulator 3 (MBNL3), 0.0 6010 75.34 0.995575750328829 TCONS_00246388_2 sp|Q9NUK0|MBNL3_HUMAN MBNL3_HUMAN Muscleblind-like protein 3; 3e-133 385 74.90 0.99601593625498 1 coding TTCCTTAAATTCCTTGCAGCTGGTCAGGGCCGGTGTGCCAGAGAGAACTGCAAGTACCTTCACCCTCCTCCACATTTGAAGACGCAGCTGGAAATTAATGGACGGAACAATCTGATTCAACAAAAGAGTGCCGCCGCCATGTTCGCCCAGCACATGCAGTTTATGTTCCAAAATGCTCAGATGCCATCAGTTAATTCTTTTCCTGTGAATCCTGCAATTGCAGCTAATCCTGCCATGGCTTACAATCCTTACTTACCTCATCATCCTGGGATGGGCCTGGTCCCCGCCGAACTGGTACAAAACGCACCTGTTCTGATTTCTGGAAACCCACCTCTGCCACTGCCAGGGCCTGTTGGTCCAAAACCGATACGTTCAGATAAACTGGAGGTTTGCCGTGAATTTCAGCGAGGTAATTGTACCCGTGGTGAGAATGATTGCCGCTATGCTCACCCTACTGATGTGTCCATGATTGAGACAAGTGATAATACTGTGACCATCTGCATGGATTATATCAAAGGTCGATGCTCCCGGGAGAAATGCAAGTATTTTCATCCTCCTGCGCACTTGCAAGCCAAACTCAAAGCAGCTCATTACCAGATGAACCATTCAGCTGCCACTGCAATGGGCCTACAGCCTGGTACACTGCAACTGATACCAAAGAGATCGGCACTTGAAAAGGTCAGTTGTGCCCCACCAGTCTTTAATCCCAATGTGTTCCACCGCCAACAGGCTCTGCCTAACGTGCCGATGCCGCAGCCGCAGCCACAGCCGCAGTTCATTCCTACAGTGCCCATGATGCACAGTGCTGCACCCACCACTATGTCTGCAGCACCACCACCTGCTACCAGCATTCCCTTCGTTGCAACAGCTCCAGGCAATCAGTTGAAATTCTGAACAACAGAGTTACAGATTACCAGAATCTCTCCGTGAGGACCTCCACATGGCCTTTCTATATTCATTCACGTATGTCCTCTTCTACCAACACAACAATAAGCGTGGTGCAGTCAATATATTAAAACAAACATGCCAACCAACACATTCAGAGAAAAAATAAAGCATTAAACAAAGGAGATGTTAAAACACAAATGGAAAACAAATAACTACCATCTGTCTATCTTATTTGAATTACTATGTAAAACAGCATAACATTTTGTAATTTATCACGTGTTTCTCTGTGATTTCCCAGTAACTGTTATGCTGAGTGAATCTCTACAGTGGACTGTTGGCTTATTGTGCATTCTTGGTGGATAAATATTCCTCTGTTTTGAAGTGTTAACCTTACCAGTTTGTTTACACAGTAGTCTATTGGGCTGATTCAGAATGTAACACGTATGTCCAGTACCATTTTCCTCATTATTGTATCATATTGGATTGTTGTGTGTTGTTAGGTTTTTACATAGTATATAGTGTTTTACTGTAATGTGTGATGTTTGATTTTAACTAAAATGTTATCAATGGGAAACAGAAACACACGTGCTTGAAAAACATGACAGGTTAATATTGATATGCTCTCTCTTTAGAATATTTCTGTAGGTTTCTTGAGGCAGACATTTAAAAGGCCTCTCTTTTGAGTATATCTAAAACCTGTCCATAAACATGCATGTATATAATTTGTACCTGTAGATCTGACTTTGTATAGTACAGTCAACGTTACTAGATTTTTTTGTGAGAGAGGAAAATTACCTGAAAATAGCCGGGAACGTCTTAAAACATTAACCTGAATTTCACTTCTTAAGTAGCTTGCAAAAGCTACTTAAGGTAAATTCTGGATTTACCTTTAAATGGTTTTCTCAGCATTTAGACTATAAATTGTGTAAAGTGCCCATTACAGGTTTTGTGGCTCAAGAATCCTGTCTTCTAGGCTGAGTGTCTAAAACTGAGCGATTTGTAATCTTCAGCTGAAAAAGTGGTTCTTGGAAGCTTAAAGGTATTTTAATTACAGGTTATAAATTAAACAGAGAGAGGGGGGGCGTGGAGATAGTTTTTACATTTTGGAGGAAGTGTGTAAAAACCATTGCAATGTAACCTTTGATACAAGTGCCATTTTCCAAGTGGAAATGGCTCATGCTCTTTACACTACTCTTTGAATAACAAGGAAGATGCAATCTGGAAAAGTCAGTCAGGGTGAAGGAAAATTGGTTCCAAGTGAGGCCTTTCCTCCCCAAATGGACAGTCTTTTCTGTTGATCACAGTTGGAGACTTTGAGTATAGGCTTGGAGAAATGGCGGGGCTGGGGAGAGAGGGAGCCACTTGAAATTACTCTTCGATTCATTTAAACTTTCTTGAAAGGATGGCCACAGTTGTCTTTAGTTTCAGTTCAACTGAGTTTTCCATTTTGTTAAAACATTTCAGTGAAGGAGCAAGCACCTGGGATATATGTTATTAATACATTTTCGCCTTCCCAAACTTTATTAGCAACAGAATCTCTCATATCACAACCAAGCCTCTTTTTTGTTTCTTTGGATTTCTTTTTTTATATGTTTTGAAAATTGTAAGAGTTTGTAACACCCTTTAGGTGAAATGGAGTGGCTGCACTCCACAGAACTGACCTGAATTCACACTACTAATACTTTTGAAATAATTGAATAGCCAAGTAGAAGAGTAATTAATTCCTATGGTATGTCACATACCTCCTCCACCCCACTCAGTTATTAAAGTTACTATTATTGATCAGTGGTAGAACCACGTGATAATTTGCATCGGTTTAGATAGATTTAGTATTTTCTAGTAAATATATGTTCCCTCACTGGAAAGCATAAAGTCATCAAATTTGTTGTATGTCCCAAGTTTACCATTCTCCTTCATGAAAATGACAAGCCAAGGGAAAATCAGGTTTTGGATACCTCAAGCCAGCCAGTAGTATTTGAAGCACAGACCAATGGAACTGGCAGAAACCTTTTCACCACCAGGGCATGTGACTTGTCCAGGACTGCCTAGCTACTTGGTAGAAGTTGGACCCAGAAATATCTCCAGACCCCGGTTGTTCCTCCATTTCATGTTCTCTGTGCTTCAGAACATTTGAGACTCCAGCCCCAAGCAGATCAATTTGGCTCAGAATACAAAAGAGCAAAATTAGCTCTTCAGTGGCTCATATCCTGTTGATCTTAATTACCAATTTGAATTGTGATCATCAGTGATTTCTAAGTGATCTTGCTTGTATTACACCATTGTCATCTGCTAACAGCATTGTCTGGAGTTAGAGAACAGGAGGCGTGTTGAATTTTACCTACTGGTCCTTTGAACCACTTAATTTCTATTTCCCAAAATCTTGACTCTGCACTCTAGCAATGTTACTTGTGTTTGGAGCTGAGTTTTATAAAACCTGTCCTCGGGCCTCTCCAGAAGGGCAGATTTGATCGAGGAAGGATGTATACTCTAGATGTATTCCTTAAAAGAGACAGAGACATCTTCAGTGTGATACAAAGTTTTTTGGGTCATTTGACGTTTTGATACAGCATACTGTCTCATTTTTTAAACTTCTGACAAGGATGTACATGAACAATAAACCTAGAGTACAGCTGTTTGCGTGTTGCCTTAAGCACTGGAAGACATGAATAGTGATGTGTTTTTGAGTAAGAGGTTCAGTGAGAGTTATTCAGGGTAGTGGTATTTTTGGTGCCACAGTTTTTTTATATTGTTGGCATTGTAAAAGTTGCTTTGTGAGTGAATTTAGAGAAAGAAAACTCAAATCACTAAGGTTCTGATGTGAAAGAATTTTGACAAAAATGCAATATTAAGATAGCACTCTTTAGCTGTGCAATGACTTATTCAAATGATCTTTATTCAAGAAAAGACAAGTGATAGACTATAAAGTTCTGGTGAAAAAGAGAAGTCACAAAACTAATCAGTGACTCTAAATGACAATTAGTAGATTAAGTGTATATATGTAAAATTCTAATCACTTGTGATTCTTAGTTAACATTTTATAAGCTTTGTAGTTTACAAGGGCCTCTTTTTTATTTATCCAAAATTATTCTTTTTGTCCCCTTCTCTCAGTCTCTTTCAAAAATACACAACTGTGCTGCAACTTGGAAAATAATCTAAATGTTTAAGAAGGTTTTAGTAATGTCAAATTTCCAAAAGCACTATGTGACCGTAACATACGTACGTTTTAAAGAGGGATTACAATTACATTTAAATGGATTCATAAAATCGCTATGTGAAGTATAGTATTTGCTTTTGCAGTTGGAGCATGATTCCTCAGCTAGCTGTTGCATTTCATTTCACTTGTCTAGAGTCTTTAATTTGTAGTTAATTGCAATGTGTAAAGCCATCTTCTGCCTACTCCATCAATCTTCTCCATCCATTCCTGAACACACTGAAGCACTTTGATCTTGCCGTAAGTGTTGTCCTATACCACTAGGCTGTGTTCACTAATGGGCAGCCTCAGCTCACCAGCTTTCCAATTTGGGCAAAGCAAGTACCTCCTCCCTACCATCAGCAGGAACCAAATAAAAATGAATCATTACAGCATGAATCTCTTTTTCATGATACGACCAAGAAGCACAGTGAGGTCCAATTAAGGACAACATTGGCATTAAATTTTGTTAAATAACGTATAGGGAAGGCCCATGTGCTACTTGGAACGTTATTTCAGCCTTCCGCCACTCCTTTAGAGAGTTTATGAGGATGCTCTTAGATAATGCAGCCACAGGTTTTCAGGTTATTTCAGTCTGTAGGGTAGGCTGTGATGCACAGAATGAATAGAAACTGGAATCTTCTTGCTTTGAATCTCTTTTGCATTTCACACATGTTTAAATAGAAATAGGTACATATGATTTCCCAATTCTGTTGAATAGATTTAGGAAGATGGTGGCCTCACTTTTTATTTTATCAGTGCCTGGCAAAGGCAATAGAATGAACACTAGGTAACAGAGTATCACAACTTTTTTTTGCAAGTTTAACTGATAGCACCTAATCCAACTGTAAATATAATTACAAATAAGGTTCTGAGCACCAACTCACTAATCGGTGCCATGTTTTCCTTTTTCTTGTTTTTAAAGTTTTTATTTTGTTCCTTTTTCATATCTTTAAGTAGTTCACGAATTTAATCTTGAAGGAGAGTTAGAGAAAATTTTAAGATTTTACTACGTGTATTCAACCCGCCTAGATAGATCTTCAACTGACACTGAAGCAAGGTGTAGAGTCTAGTTCATGACTATTTCTTACAGTTCACAATTTAAGAACAAAGTTAACTTTATATACAAATAATAATTTTTAACTAATTATATTTAGTTGTTGCTTCAGCAACAAACCTACAACATGGCTACCTTTAGACATTTTTGTGTGTGTGAAAATTTTACTTGTAAAACTGTGGCTTTTTTGACAGTGTAGCATGTAGCAGATACAACTCAAAGCGCAGATATAGATATGGTTGATTTTTCTTTTTAATCCCAAAGTTCCCTGTGAAAACTGAATTTGCGTCCTTCTGTGACTTTTTGAGCAAAAAGTTTACAACATGTGGATTCTAGATCAGGCTTTAGAGCTGATAGAATTTGTTGTGTGGATAGGGTTATTCCACAGTATTTAGACACAATTGTATTCATAATATGTCCTGATCTCTTTTTATGACCTTATTCAAAATTACTCAAGTGGCATAGCTGTAGCTACAAAAATTTTCTTACTCAAATCTATCCAAAGGAGGGTTAAAGAATGACAAAAGCGCAGATTACATTCATTCACGTTGGTGAACTCATTCATACAGATACTGTGGAATGACCCCATAACAGTGTTGAAGAGACATATGCTGCAGTTAACTGATGGTCTCAGTTAGGGTGCGAACGTGTGAGACACACCTTTTTTGCACTTATGTACATAGTTCATGAAAGTGACCCTTGGAGTTTTGTTTTTTTAATATAAGAAGTCTGTGATAATAGTGGAAAAGTTAGTAAGAGAGAGTTATTTCTAAGACTTTGAGAAGAAGGTGTTTTTTTTTTCCTACAAGACTTAACTAAAGCATGATGTTGCTTTCCTGTTGTGGAGGCTTTCTAGTTTGCTACAGCTCACCATAAGACAAGACTGGTGGCAGGTAACAGGTCAGCTTCAGCCAGTGGCACTAAACAAAAGTTCATGTACTTCACCTTTTAGCAAGATCGCTAGCAAAGATTGTTTTGTGAATTAATCCTCAAATGCACACACACAACCCCAGGCAGGTTTGTGGTGCTAAGGTCTTTTTTCAGTGGTTACAAGCAGTGAAGTACCTTGTAAGCTGCAAGATGGATATTCCCATTCTGATCCAATTAGATTTCATCTTTCACAGAAAATGATCAATTGAGATATATTGGTTACATCAATTAATATATATTTATGTGACAATCAAATTGTTAACCCTGGCCACTATTTCCCCTTCAAGATCCAGAAGCCAAAACCAAATTGGCAACTATTGAAAGATATAATTTAACAGTTAAGTATGGCCAGCACAGAGCATTTGATCCCCTCCAACAAAGGGAAAAAAATGTTCCTGACACAATTTTATATTTACTTTATACCTGTTCAGTGGAAGCTATTTTCTGACTTAGCTTTAGCAGATTAGACAGTGCTTCACTGTGCCACTTCAGCCTCCTACTCTTTTAATGAAACAGAAGAGAACCAGCCAAAATCTTACATATTAATACACTGGAGCTAGAAAAGAATGTCAGACCATCTCTTTCAGCTCCCGCGTCACCTACAAATCACCATTTATCTTTTTGTTGCCTCCAGGCAATGAGGCTTAGAAAAAGGTCAAGATTAGAAAGGTTTAAGGATAGATCATCATACAGACTTTGAGTCCTTCCCATCTTGAGACCCGTTGCCCTTGCCCTGGAAAAGGAGCCCATCTTGGGGTTGACAGAGTTGGTGTTAGTATTGTTACTGATCTTGATAGTTCTCACTTACAGAGACATGAAAATAAGCCAAAGCCAGAAAGCAATCCAAGCCTTACAGTTGTCCAATAGCTCAGGGCCAGTTGGTCAGAAATTTGTTCCCCCCCACCCCCTACTTCAATCCATGATCACTTACAGCTAACAGCCTGACCATCTGATCAGCATTTCCATTGATGTAAAATGTAAGCATTCATTCATTTTGTAGTTACCACCAACGTATTTTCCCAGCTTAACCCATGTTCTTGTGTTAATATTTCCTTGTGAAAATATAAGCCACACGGATATATTTTCATAAGGTCAATAGAAATACAGTAAGATTTTAAGTTAGGCAGAATCAACTATAAAATAGTAAGAGTGAACCTAGAAGCATCACAAAAGATAATCAGTTCACCGATGGCATGTTGTATGTACTGACAGCCACCGGGTCACATTCTTTGGAGCTTAAACACAGTGCTGTCTTTTGAGTAAGTAAAATTAGAGGATAAAAGGACCTCTGTTAAACCCAGAAAAGGATTTAGTTTCGTTAATTCAGTTTCCACCCGCTACACTTCTTCCCTGGAAGAGAACTACCCATCAACACCCCAAAGCAGGATTATCCCAGAGGCATTTTCTCTTTAACCATCCTCAATTATAGCATACTTAGGAAATGTATCACTGTGAAATAAATCAAGCTGCATCGTATTACTTTAGTTGTTTTAAGAAAAAACCTCTATAAAATAACCCAACTTTAAGCAGTCCTCTTTCCCCACACACAACCTAAGCATTTATCTGTCATAGAACTGCATGATTACAAAGCTTTATTTCTGTATACAGATGCTATTTGTTAATGATGGAAACCAAATTATTTTGTTGCTGTGTCTTTTGTCTCTAGCAGTTGAGAGAATTATTATGACTAGTATATCATTGGATTTGAGGGTTGCCATTGTCAAAATCAATTTTCTTGTATTACTGTAGTTGCATTAATTATTAGAAAATGAACCATTCGTTACATGCACCAAAATTACAATAATTTAAATAAGACTTTTAAAAGATGCTCCTAAATATATTCTTTTGTAAGATGCTAACTATGCATTCATATAACAGCAGTCCGGTATAATGTAGAAAATGGAAGCACATATTTTGGACAGAAAAATGCCAATTTACATACAATATAAAATTATTAACCCTGTGCAACAATTATAGATTTAAATAATGGTCATAATATTTAATAAGTATAGACTGTTCCCATAATATTTTGCCTCCAAAATGCAGTAGCTCATTTCCTCAACTGCTATCAGTAGGTCAGATGCTTTGATTTTCTTGTTTTTGTTTTTCCAAGTTATAGTGCTATACTGCTTGTTTGTGTTTAGAAGTGTGCATTATGCGATTCATTTTAGTATGCTATTTCCATGTTGTTTATTTTTTGTTCTTTTAATAAAACGTGTAAATTTCCTGGTTTTGTCTTTTTTTATGAATCCATATTCACACATTAGGAGTTCACTTAAAAGCTATTTGTCTTCGAGT EMBV3_18792 CAGTCTGGTTGGCGTGGAGGGCGGCCACTCCATCTTCAGCCACTCCTCGGCATACAGCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32136 TAGGCTGGCCATCACATCCTGGCTCAGTGGCTCTGTCAACTCTCTCATACATACTGCCAT Gene GeneID:787500|LOC787500:XM_002687020:76_cdna Constitutive 0 NULL GeneID:787500 4 GENE LOC787500 NULL similar to CfOLF3 EMBV3_02250 GCCTTGCTGCGCGCCAACCAAACTAAATGCCATCTCTGTGTTGTACTTTGATGACAGCTC Gene GeneID:507682|BMP5:XM_002697170:194_cdna Constitutive 0 NULL GeneID:507682 23 GENE BMP5 NULL bone morphogenetic protein 5 EMBV3_27416 TGGATCATCAAGGTCCCTCTTCTCGCTCCTTAGAATGCTCAAGTCCCTGGGGAAACCTCA Gene BVV0102_151636 + 0 NULL GK000030.2:91191314-91192242 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25028 TCCCTGCCCCGCGTCCCGCCTCTGCAGCAGATTTCAACACTAAACTTGCACAATGTCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37700 CCCAAGATTGGAACTGCTTGCCGTGATGTCCTGATCATCTGCATTCCTTTTCTGGGTCTC Gene GeneID:518808|HEATR7B2:XM_002696365:44_cdna Constitutive 0 NULL GeneID:518808 20 GENE HEATR7B2 NULL HEAT repeat family member 7B2 EMBV3_16231 CTGCTCAGAATGGTGCAGATGAGGGAACTGGGGCCTGGAAGAATTCTGTGGAAGAGTGGA Variant GeneID:506577|UBAP2:XM_002689799:88_cdna 769^834 1 EMBV3_24155 GeneID:506577 8 GENE UBAP2 NULL ubiquitin associated protein 2 EMBV3_40950 CTACAGTATTTGTACCTTCAGAAATGTCAATTCCCCCAGGAGGATCTGAGGTATAGCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39554 GCCTCTGCATAGTGGATTTCGAGCATTTCTCTCGGGCTTTAATTTGCTAAAGCTGTGCAC Gene GeneID:538774|SUZ12:XM_002695636:57_cdna UTR3_Alt 3 NULL GeneID:538774 19 GENE SUZ12 NULL suppressor of zeste 12 homolog (Drosophila) EMBV3_34951 TGTCACGTCTGTTAACATATGCAGCTAGAGTGTCTACCTTTATTACAACCCACACTACGT Gene GeneID:618738|SULT4A1:NM_001076518:216_cdna Constitutive 2 NULL GeneID:618738 5 GENE SULT4A1 NULL sulfotransferase family 4A, member 1 EMBV3_35796 TTTATTTAAGCCCCCAGAGCTGCTCTTCTCCACCCCGACACACAGGCTCTCTGGCAGGCT Gene GeneID:782742|NAPA:NM_001098151:457_cdna Constitutive 0 NULL GeneID:782742 18 GENE NAPA NULL N-ethylmaleimide-sensitive factor attachment protein, alpha EMBV3_15908 TGCTCGGTGACATCATCTCCTTGTGGCTTTGTAACTCGCTGGCCTACCTCGTCAATACCT Gene GeneID:337927|MTCH2:NM_176634:27_cdna Constitutive 0 NULL GeneID:337927 15 GENE MTCH2 NULL mitochondrial carrier homolog 2 (C. elegans) EMBV3_40492 CATCAACCAGACCCTCACAGACCTTTATCTGACCAACAACGCCCTGGGAAACACAGGTGT Gene GeneID:522018|NLRP12:XM_002695354:46_cdna Constitutive 0 NULL GeneID:522018 18 GENE NLRP12 NULL NLR family, pyrin domain containing 12 EMBV3_12774 TATGAACCTGGCATAAGAGCAAGTTATTTGACATTATTCGTGTCCAGTAGAGTTGCGAGG Gene GeneID:767842|C4orf32:NM_001076961:83_cdna UTR3_Alt 1 NULL GeneID:767842 6 GENE C4orf32 MGC140679 C4orf32 homolog EMBV3_15287 CTGGTGTGCAGCGGTTCAAGAGGTCGCAAAGAGTTGGGCACGACTGAGTGTCTATAATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40149 TCTGGCCATGAGACATGACTTTTAAACAACAAGGAGGTGTGTGGGGGGTGGGTGTTTCAC Gene BVT0102_254178 + 0 NULL GK000007.2:83607999-83618465 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00222656 1 XLOC_135963 NonCoding TCONS_00222656 XLOC_135963 NonCoding NonCoding - 7:83615298-83616406 - TSS166654 1108 3 TCONS_00222656_2 53 0.175992779783394 1 0 0 5.44139686738484e-05 0 0 0.00124320749078454 3.22838794141049e-06 0 0 0 1.8567218725391e-05 0 0 0 0 0 0.000905812656909131 0 0 0 0 0 0 0.00120057421791514 1.51305405512854e-05 0 0 0 8.66893138695601e-06 0.000192782308463967 0 XM_003582294.2 PKDREJ PREDICTED: Bos taurus polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin) (PKDREJ), mRNA. 5e-69 266 74.94 0.391696750902527 0 noncoding 0 0 0 0 -0.0433588578465648 0.710528510495053 -0.175368279431953 0.109721342620911 GAAACTCCATTGCATTAAAACCAGGAAGAATTAATAGGGAAGAGTTTCCTTTCTTAATCAAAAAGCTTTCAGTCCTGTTAGAAGCACTTGAAAACCCTTACCATCAAGAAGGGCATGAAATCTCAAGTGTTCCTGGAGGATATTTTAGCACTCCAAAGGAGAAAGTAAGTCTGACTACATTTTTATGTTCCCTCTGTCCTTAAGTCTCCAGGGGCTTGAGGATGGCTGCTGATGAACCAGCTTCACTGCTTACCCTTGGATCAATCATGTTTGCTTAAAGCCAAGGCACCAAAGAAAGCCGAGGAAGATTGTACTCAAGTCATCTGTTTTTAATTACATTTCGCTCTATTCCAGCTTCTCCAGCATCTGCTTTCCCTGGAATATGCCAGAAACATTCCCATCTCAAAGACTTTGCATGGGCCAGTCATTCTATAGGAAACATGCTACATCCAGAAATCCTCATGGGTCAGTCCCTCTCTGCCTCCAGATCTTCACTCAAATGTCCCGCAGTAGAGCCTACTCTGACCACCCTATTTTTTTTTAATTTTTATTTTTTTCTTAATGTTTTCTTTATTATTCCTAAATAATCTATCAGGCCATCAATAACCAAAGCCCAAATCCTGGATGTGTATATTTCTGTATTCATTATATAGAATATTAACTATCTTTCAATGTGAAACACCCACCCCCCACACACCTCCTTGTTGTTTAAAAGTCATGTCTCATGGCCAGAAAAATGTTATTAAATTTTACATCTTTAACTTGCAGTGTCCGTAAGGAGTAGATTGGAAGCTTCAGACTTCTGACCCCCTAGTCCACATTCCTGCATTCTCAGGTATGAGGGCAACTCCTGGAAGCCCTCACCAGGCCCCTCCAGCCCTGGCCCAGCTGGAGTAAGGGTGGCAGAGGTAAGGAGGGTGGGGGAGGCTCTGCAGCCCCACCTGCAAAGGACACACTCAGTGGGGCTGGGGAACCCCGGCCTCTGCACTGAGCCGCAAGCGCTGGCCTCTCAGCCCCAAGCGCTGGCCTCTCAGCCCCAGGGGAGGGAGGCCAGAAGCTGTAGAAGCATTTTCCTGCTGCTTCTGGCAAGTGACCACCCTGTTTAAAA TCONS_00217830 . 3' 2060 TCONS_00217830 . 3' 3167 EMBV3_16729 AGTGGTACAGGAGGCTGCTTGGCAGGTTTGAATAGTTTTACTCTAACATTTTCCTCAGCC Gene GeneID:515927|CXHXORF15:XM_002700387:3_cdna Constitutive 0 NULL GeneID:515927 X GENE CXHXORF15 NULL chromosome X open reading frame 15 ortholog EMBV3_10716 TGGAACTAATCTGTTGCTCCATGTCTAGTTCTAACTGTCGCTTCCTGACCTGCATGCAGA Gene BVV0102_350364 + 0 NULL GK000016.2:5302726-5486927 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08160 TTTTACAAGACTCACCTTGCCGTACCTAAATAAATACACCTGGCTTTGTGGTATCCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31225 TCCTACTGTAAACGGCTGTCCTCTCCGCAGTCGGGTTAGCGTCACATTAGTGCCTTTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09822 ATGTCCTCTTGGAGTAGATATATCAAAAGAAGTTGGAGAAGCTGCTATAAAAGTGCCAAG Gene GeneID:514738|OSGEPL1:XM_002685221:107_cdna Constitutive 1 NULL GeneID:514738 2 GENE OSGEPL1 NULL O-sialoglycoprotein endopeptidase-like 1 EMBV3_42359 GACCAGCATGGCAGGATTCAAGCGAGGGTAAAAAGTGGCAGTAAAAGTTATTGACAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34364 GAGATTGAAGTGGAGGAGGATGGCAGGAAGCCAGTGCTGAGAAAAGCATTCCAACATCAG Gene GeneID:535403|MYST4:XM_002698885:16_cdna UTR3_Alt 2 NULL GeneID:535403 28 GENE MYST4 NULL MYST histone acetyltransferase (monocytic leukemia) 4 EMBV3_35259 CCTGGACCAAGGAGATATTTTGTATCTTCAAGGGGCCTGCACTGCTTGGAAACAAGTGGA Gene GeneID:282261|IGFBP3:NM_174556:16_cdna Constitutive 0 NULL GeneID:282261 4 GENE IGFBP3 IGFBP-3 insulin-like growth factor binding protein 3 EMBV3_31546 CCCACTCAACAGAGGAAGATATCAACAAGCAGATAAATGACAAAGAGCGAGTGGCGGCTG Gene GeneID:512871|FAM96A:NM_001035110:49_cdna Constitutive 2 NULL GeneID:512871 10 GENE FAM96A MGC127083 family with sequence similarity 96, member A EMBV3_20892 GTGCTCTGCCTGCCATTCAGGAAAAAAGCATCGGTACACTTGTTCAAAGAGCATGAGTGC Gene BVV0102_335530 + 0 NULL GK000004.2:48302662-48368846 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181514 TCONS_00181515 TCONS_00181517 TCONS_00181513 TCONS_00181516 TCONS_00181518 1 XLOC_110626 Coding TCONS_00181516 XLOC_110626 NonCoding Coding - 4:48367818-48411606 - TSS135834 1479 1 TCONS_00181516_1 68 0.289384719405003 4 0.966314202845593 0.00173876040077127 8.53826209893193e-294 0.000429933680180137 0.000117908784982983 0.000108167423455402 6.39880736232082e-05 9.61692626421804e-05 0.00233384671099789 0.00051669726501196 3.06014012482955e-05 0 0 3.4234476518513e-05 0.000240093664718455 0.000116720974415265 0 0 1.84736781369485e-89 0.000186846018451458 0.000891390792015338 0.000541919500519417 0 0 0 0.000298742367463233 0.000130882166926941 0.000273114133219854 0 0 0 NM_001105444.1 DUPD1 Bos taurus dual specificity phosphatase and pro isomerase domain containing 1 (DUPD1), mRNA. 4e-46 190 79.28 0.138607167004733 0 noncoding 1 0 1 1 -0.054984673095394 0.674139315941981 -0.03700722363252 0.496527217636491 TGCAACAGAGAACCTAGGTGGCTTGTGGGTAGTGGGTCAAACACAAATTCTAATCTTGAGTCATGAGACTAATAAAGTTTAGCTCTAAGATATAGAATGAGTGCTCTGCCTGCCATTCAGGAAAAAAGCATCGGTACACTTGTTCAAAGAGCATGAGTGCCTGAGTGGCACTGTGTGAAAAGAAGCTGATAAAATGTTGATGGTGATGCTCTGGAGGAAAGCCGCAAGGCCTGAAGGTATCTTGGCCTTGGTTCTCTGAAAAATGAAGACTTTGGAACTGCATTATCATCAAAGGATGCTAAAGAGAATGAGTCACAGCAAAGGTGCATGAGATGGATGCTCTTCCTGCCCAGTGTCACCAAGCCGCGATAGCCCCGTGCATGTATATGCACCTGACAGTCATCTACCTCACAGGAGATGCTGGTGTTCATGGGTCACGGCACCATCCCCTCTGGCCACTCTTATTAGAGAGGCTGTCCATTCTGTCTTTCTGTTTACTTCTATTTACGCATTCATTCTCTAGGCACAATATAAAATAATTAACTAAATATAATTTTCTTATATATAATCACCATTCAGTCTTGCCCCCCTGAGGTGATACAGATGTTATCCAGATCATATTTGCAGAATTAATAGTCTGTTGGGTCCTCTTTAAGAGGCCTAGTTTTATCTGCAGTGTTTTAATTATTTCTATTTTCATGTTCAAAGTATAATTTTAACTTCATTTTGGAGACTTTGCTGCCTGTTTTCCTTTTATGAAATCTACTCTTTAACTAGGTAAGGTTGTGTTTGGCCAATGAATGGGAGCTCAGCGATTAGAGAGGAGGAAAATGAAATTGAACATTGTCTCCCTTTTCCCCCCTTGGTGTTGAGGTGGTAGCACTGCCCCGGTGTTGCTGGGCCCAAGACAGTGCACTGTCCCTTGTTGGTCTCCCTAAGTCCTGTCTACACCATTGTAAAGTCTCTTCATTAAATACTCCTCAATTATAGACTTTGGACATGCCATCTCTTCCCTGTTGGGACCCTGATATAGGTTGGTGTTGACTCTAAACCCAATAAAAAGCTTTATCTCCTATTACCAATAGGAGGTAAAGGTAAATAAGACTAGAGCACAGATGTGTAGCCAGCTAGTTATATAGTGATAAAAACCCAAAGACCTAGAAATTTAATCTTTAGGCTGTGAAAGAACAAATGTTAGGTACTACTTTCCTAAAAAACAAGAAAGTGAAATAAAATAGAGTTTTTTTCAATTTTTTATTGAAATATAGTGATTTACAATATGGTATTAATTTCTGCTGTATAGCAAAGTGATTCAGATTTACATTTTTAATATTCTTTTCCATTGTGGTTTATCACAGGATATTGAGTATAGCTCCCTGTGCTATACAGTAAGGACCTTATTGTTGATCCATTTTATTTATAAAAGCTTACATTGCTAATCCCAACCTCCCACTCCATTCCTTCCATAACTCCCTCTCC TCONS_00181515 TCONS_00181515 TCONS_00181515 s 5' 0 TCONS_00181515 TCONS_00181515 TCONS_00181515 s 5' 0 EMBV3_04169 TCACAGGGATGTCGTGAGACTTCAGATGAGAGGAGGACAAAGGTTCCTTGAGCTCTCGGT Gene BVT0102_310860 + 0 NULL GK000029.2:8674454-8788701 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162999 1 XLOC_099790 Coding TCONS_00162999 XLOC_099790 Coding Coding FZD4 29:8669600-8678576 = TSS122273 6815 1 TCONS_00162999_2 537 0.0434336023477623 2 0.240891364902507 0.0004636513178142 0.000254614106243504 0.000179231349924681 0.000109665649228391 9.67500627141264e-05 2.04711463246804e-05 6.80933332788385e-05 9.59854210538319e-05 1.88540378872679e-05 8.88166880489312e-06 6.01168513287058e-06 3.72586241518473e-12 1.5566422257111e-05 6.95034857633499e-05 1.04674280119306e-05 0.00160058336902544 0.000591980181454038 0.000337417319227739 5.98288593315788e-05 0.000160252810014269 2.25378156444549e-05 0.00052464900661173 0.000896699215212089 0.000961834103993347 4.957977543974e-05 7.96430733340469e-05 7.26941995535674e-05 0.000116982070371048 5.34657330226964e-05 0.000414637469957927 NM_001206269.1 FZD4 Bos taurus frizzled family receptor 4 (FZD4), mRNA. 0.0 4846 100.00 0.394130594277329 NM_012193.3 FZD4 Homo sapiens frizzled family receptor 4 (FZD4), mRNA. 0.0 4816 82.50 0.673220836390315 TCONS_00162999_2 sp|Q9ULV1|FZD4_HUMAN FZD4_HUMAN Frizzled-4; 0.0 1061 97.58 0.998137802607076 2 coding 0 0 0 0 0.0219165602187008 0.916032584127342 0.0258067057161755 0.668116542650897 TGGCCATGGCCTGGCGGGGCGCAGGGCCGCGCGTCCTGGGGGGCCCCGGGGGCGTCGGGCTCAGTCCACGGCTGTTGCTGCTGCTGCTACTGCTCGTGGAGCCGGTGCGGGGCTTCGGGGACGAGGAGGAGAGGCGCTGCGACCCCATCCGCATCTCCATGTGCCAGAACTTGGGCTACAACGTGACCAAGATGCCCAACCTGGTGGGGCACGAGCTGCAGACGGACGCCGAGCTGCAGCTGACCACATTCACGCCGCTCATCCAGTACGGCTGCTCCAGCCAGCTGCAGTTCTTCCTTTGTTCCGTGTATGTGCCCATGTGCACAGAGAAGGTCAACATCCCCATCGGGCCCTGCGGCGGGATGTGCCTTTCTGTCAAGAGACGCTGCGAGCCTGTGCTGAAGGAGTTTGGCTTTGCCTGGCCGGAGAGCCTAAACTGCAGCAAATTCCCGCCCCAGAACGACCACAACCACATGTGCATGGAAGGGCCAGGTGATGAGGAAGTGCCCTTGCCTCACAAAACCCCCATCCAGCCTGGGGAAGAGTGCCACTCCGTGGGAACCAACTCGGATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTTCTCAAGTGTGGCTACGACGCTGGCTTGTACAGCCGCTCGGCCAAGGAGTTCACCGACGTCTGGATGGCCGTGTGGGCCAGCCTGTGCTTCATCTCCACCGCCTTCACTGTGCTCACCTTCCTGATTGATTCTTCCAGGTTTTCCTACCCAGAGCGCCCCATCATCTTTCTCAGTATGTGCTATAATATTTATAGCATTGCTTATATTGTCAGGCTGACTGTAGGCCGGGAAAGGATATCCTGCGATTTTGAAGAGGCAGCAGAACCTGTTCTCATTCAAGAAGGCCTTAAGAACACAGGATGTGCAATCATTTTCTTGCTGATGTACTTTTTTGGAATGGCCAGTTCCATCTGGTGGGTTATTCTGACGCTCACTTGGTTTTTGGCAGCGGGACTCAAATGGGGTCATGAAGCCATCGAAATGCACAGCTCTTATTTCCACATCGCAGCCTGGGCCATCCCCGCGGTGAAAACCATTGTCATCTTGATTATGAGACTGGTGGACGCAGATGAGCTGACTGGCCTGTGCTACGTGGGGAACCAGAACCTGGATGCACTCACGGGCTTTGTGGTGGCCCCGCTGTTCACCTACCTGGTGATTGGGACTTTGTTCATTGCTGCGGGGTTGGTGGCCTTGTTCAAAATTCGGTCGAATCTTCAAAAGGATGGGACGAAGACAGACAAGTTGGAAAGGCTGATGGTGAAGATCGGGGTCTTCTCGGTCCTGTACACAGTGCCTGCAACCTGCGTGATTGCCTGTTATTTCTATGAAATCTCCAACTGGGCGCTTTTCCGGTATTCCGCAGATGACTCCAACATGGCAGTGGAAATGTTGAAAATCTTTATGTCTTTGCTGGTGGGCATCACTTCAGGCATGTGGATTTGGTCTGCCAAAACTCTGCACACGTGGCAGAAGTGTTCCAACAGATTGGTGAATTCTGGGAAGGTAAAGAGAGAGAAAAGAGGGAATGGCTGGGTGAAGCCTGGGAGAGGTAATGAGACTGTGGTATAAGGCTAGCCAGCCTCCATGCTTTCCAGGGGGAATGCCAGCATTGGGGTGCAAGTGCTACTAAAAAGCTTATGCAGTGAATCTCAGTTTGAACAAACTAGCAACACTTCAGTAACCCCCCCCAATAATCCACCACCGCTCTCCCCCCGCTGCCCATCTCCCCCCAGCATCATAAAACTAGTGATTTTGCTGCAGACTTTGGAATGATCCAAAATGGAAAAGCCAGTAAGAGGCTTTCAAAGCTGTGAAAAATCAAAACATTGATCACTTGAGCAGGTCGCAGCTTGGAGCGTGGAGGTCCTCCCGAGATTCCAGGAAGTCCAGGGGATGCTCCTTTTCCCTGCAGGGTGGGATTTGAGCTGTGAGTAGGCAACTTACAGGGAGAAAGATTAACTTTTTTTTAACCCTTTACAAGTTTTAAATACTAACTGGGTCTTTCAGACAGCAGAGCGATCTATAAACACTGGAAGCACTGGGTTCAGAAAAGTGTTACAAGAGTTTTATAGTTTGGCTGATCTAACATAAACATTTTCTGTGGTACACTGTCTGCTGTTTAGAACTTTGTGGATTGCTCTCCCAAGAGGTGGTGTCAGAATCTTTCAGTGCCTTTGTCATAAAACAGAATTGTTTGAACAAACAAAAGTACTGTACAAACACACATGAGGTATCCCGTGAATTTTTCTTCTCTCTCTCCCTCTTAAATTTCAACAGCTCCCTACTAGACCGCTGCTGTTTTTTCCATTTTACATTAATGACTCAAAATAGGTATTTTTATAGGAATGTTTGCACTGCAGCAGGTCTAATGAGGGGGGAAAGGAAGGGCGATTCACTTTCTTGACAATCACTTAATTCAGAGGAAAATGAGATCTACCAAGTCGACTTACCTTACCCACCCCAGAGACCGATTGCATTGAGCACCAGGGACTTAATATATTTTACTTTGTGTGATTGTATCTATGCAGACGCCAGTCTGGAAGAGCTAAAATGTTACGTTTCTTGGCAACTTTGCATTCACACAGATTAACTGTATAATTTGTGTGTGTCAATTACAATTAAAAGCACATTCTTGGACCATGACTTAATAGTTACTCAACTGAGTTTAAAACTATGGTCAGCTTGCATTCTCAGAATGATGGTGCCTTTTTTTTTCTCTTTAGCATAAGAATGTTATCAGAGTCTGGTCTACTTGGCGCAATGGAGACTTTTTCAATTTTGTAGAGGGAGCTAAGGACAACTAATCCAACTACTTTGGTGCATAATTGTTTCCTAGTAATTGGCAAGGGCTCCGTATAAGATTTCATTGGAGGCAGTGTGGCCTGGAGTATTTATATGGTGCTTAATGAATCTCCAGAATACCAGCCAGGAGCTTGATTGGTTTGTAGGGAATAAAGTGTAGACCATATGAAATGAACTGCAAACTCTTACAGCACAGGTCTTAATTGCATTTTGCAGGGGTATCCAGAGCTTTTAAAATGCATGCTTTATATTCCTTGCAAGAGGGTACCCCCTAGCAGCCTCTCAAAAGTTACAGTTCTTTTAAAGTTATAACTGGCCTTTCTCCTCAACCCCCTGAGGTCTTCTAATCACCAGATCTTTGGGACAGATTGATGTAACAGGTTGCTGTCCTTGAAGTTCATCTCGGTCTTTGCTTTAGCAACTTTGGGATGATTATTTATTTATCCCTGCCCCTCCCCCCCCCCCTTTAAAACAGGTAGGAAAGCTCTTTTATCCCATTTCTTTGTGGAGAAATGTTTCTAGGGACTCAAAATTGCAAATAGGAGTTCAGATTCTGGAAATAAGCATGTCTTTGTTTGTTTGAGCTTCGTGCCCCTAGTTTGACATTTTCCTTTCTTCTCTCTCTGGTCTGGTGTGGTTCTCGAGCTGAGATGAAGATGTGCGTAAGGACTGTTGCCTGTTTTGGAAGGCAAAGTCTTGGGGTTTCGTGCACAGATGCTAAGTGGGCACTGGTGGCCCCCACTGTGTGTTCTGGGCCTGAGTACCTTGGCTGGACTCTGGGTCAGGGCTCCAGGAGCATGAGAAATGCTCCCCAGAAGGGCCAGTTGAACTCCATCTACGACTGCATCGCCCCTGAAACGTAGAATGTGAACTCCCTTTGCTGCTCGCAGATGGTTCCCATAGCTGGCCGGGGTCCTGGAGCATGCACCCAGGGCAAAGCCTGCCCTTACTCACGCTCCTCTCCAGTGTCTTGGGAGTTGCTCGGAGACTCTGGCCCAGGAAAGGGAAAAAGGACCGTGCAGGGGTTTGCAATGCAGTTCTCTTTGTAATGTTTCAGTGACTGGGTGACCGAGACAAGCATCCTAGCAGAGGGCCAGTTGTGGAGAGGGTGCTCCGTGTTTATGAATGATGAAATAGTGACAGTAAGGGTACTTGGGTGAACCTGGATGCCCAAGTTCTGGAGCTTTCTAGGTCTTAGAATGTCTCTTCCGTCAGTCTCTTGCCTTCTCAGGGGAAGTATATTTGATTGGAGCTGGCCATTGGCACACACTGACAATGTCACAGGCTTTTAGGTTGCTCCTTTCACATTCTAGACTTTGGAGGGTGTTTACGGTTTTAGGAAAGGAGCTTTGTGGCTGAAGAGTTAGTTATCAGTTACCTTGAAGTGAGTTATTGTCACCTCTTAAATTGATATTGGTTTGAAAAAAAAGTTAATTATCAGCACATTTATTGAATGCCAGCTGTGTGTCACACCCTGTGTTAGGCACCTTAAGGGACGTCAGGGAGGATCAACTCTGTTCCTCTAACCAATCCAACCTGGTTCTGCTGAACTTTGCCGTTGGTTTCAGAAGGAGCAGGGGCTGCTGAATTGCCACCTGTTTCACTGTCTCCATCCCATAAACCTCTTCCTGGGTCTTTCCAACTTTAACCCATCACTCAGCCCTTCCCGGGGTTCCTTGCAAATTGATGTGCAGGGGTTTTGCCAGAAAGCATCAATTCTGTTACAGGACAGTCTCTATGGAAACCTCCCCAGATGATCATGAACCTTGGCTCCATCTAATGTGGCTTCCGGGGCAGGTTGTTCAGGGCTCGGGGTTTTCTAGTGACTTGCGTGTGCACACTAGGTCGCTTCTGTCGTGTCTGACTCTTTGCGATTCTATGGGCTATAGCCCACTAGGCTCCTCTGTCCAGAAAGATTGTCCAGGCAAGAATACCGGAGTGGGTTGCCATGCCCTCATCCAGGAGATCTTCCCGACCCAGGGTTCAAACCCGAATCTCCTGCATTGGAGGCAGATTCTTTACCACTTAGCCACCTGGGAAACCAATCTAGTGACTCACACAGGTGAATTTGAGGACAGCAGCTTGCTAGGGAAAAGGTTAGGGTTCTTCCTCTTTCTCAGAAATCCAGGAGAAGTAGGTATATAATTGTAACTTCCTACAAAATCCCTTGGCCTCGAAAAGGCCCAAGGGCACCTCTGTCAGCTTCCTCTCTGGCAGGCTCCTTTCTCCTCCTCCGTAAGGGTTGCACCTCAGGGCAGAGGAACCTGGGCAGAGTGAAGCTGACCAGAACCTCCTGATGCAGTGCCTTGGTTGAGTCATATCCTTTTTCCTCTGTGGAGACCCGTTTCCTGATCCCTGAGACTGCTTCTGAACTGGTAGCTTGCTCAGGGACCTCAGCCAGGAGAAAGAGGGACACTCATTTATTTCCCCGAGATGCTCTCTGACTTTGCTTTCCCCTGGGCCTCTGTCTCCTGCGTCCCCCAAACCTGGACCCCAGGAAGCTTCTGTGTCTGGGTTCTGACACCACCAGCACCCCAGCTCTGTCCTCTCTGCCCTGCCCCACTCAGCCTCCTGACCACTGAATTCAGTGGGGGAACCCAGCTGAGACCTGAGGGTGTAAGGAGGGACCCCACAGCCTCAGCCCTGGAAGGCAGACTTAACTGGAGATTTCACCCAGGTGTGCACATGCCGGCTTCTGGCGAGGGGGCCACCGCCGCAGCCAGAAGAGGGCTGTAGAGTGCCCCCTGGAAGGAGCCCCAGAATCGATCTACGTCCTGAACTGCATTCCGTGATGGGGGAAGTTGGAGAGCATTGCTGTCCCAGCCAATTATGTCACGTCTTTGGACCCTCGACGATTCTTTTTGCCTCTTTACTGTACTTGGGCTCAGAGTCCCTGTCTGGGTTTGTATTACATCTGGATAGGGACCTAGGTTCTCATCTTTCTCCAGGGCCTAGGTCGTAGATCTTGGAAACTCCTTGCAGAGCATTTTGCTCCTACCAAGGATCAGATCCCAGAGGCTTAAATAATGGATTTTGCTGCGCTGTGGCCTCGGCAGAGCTGTCTGCTGCCACCTCTTGTCCTTGTGTGTGCGGTGATGCCCACTGGGCATTACCCGGAGGGAAGTGAACCCCGGAGCCCCCTTGCCTGCCCCAACAAGCCTCTACTCCGCGGTAAACCCACCTGCTGTTTCTGTTTCTGATTTACCTTATTTCCCTTCTTCTTTGCACCAGCAAATCCCCAGTATTCACCCAGGCAACTTGTCGAGGGCCTGCTTGGGGACCCATGAGCCATGTCCTCCAAGCTTACGGAGCTCCCTGATTGCCCACAGTATTCAGTATACGACCACTGTCATCCCAGCAGGCTTCCTTGGAGGCTGCAAGCGCCCCTGCCCCCCGGAACCTGGGTCCATCTGCCCTCCCACCATCCTGCCGAGGGCTCGGGCCAGCCTGGCTGGGGCCTTTGGGAAGGCAACGCTGATGTCTCTCCCAGTGGGGCATCTAGGTGGCCCTAAATTTCTTCCTACCTCACAGGGATGTCGTGAGACTTCAGATGAGAGGAGGACAAAGGTTCCTTGAGCTCTCGGTGGGAAAGGTGGAGTGAGTATCAGGTGTGATCTAGACAGAGATGAAATTCCGCCTGCTGGTGTGGCGGACAAGCTCTTGCTGTGTGGCCTTTCTCGGTCCCCCAAGCCACCCGCAGCCGCAGCCCCAGCCCCCTTGAGGCCAACCTGAGGGACTTTCAGATGTTCGACATTAGAGGTACCAGCAAACCCCTACGACGCGCCCTGAATGAATTGCTGAGCGTCAGAAGAAATGGACCCTGCTATCGAGGATGTACAAACGTATGTCTGCATTAATGTCTGTACTGTAAATTTCTAATTTATCACTGTACAAAAAAAAATAAACTTTGCTATTTAATTTTTGTATTAAAGGAAAATAAAGTTTTGTTTATTAGCTGGTGTG EMBV3_06752 GGATGCACAGGGTCTTCCGATGCTGCTCATGGGTTTCTCATTGTAGTGGCTTCTGTTGCA Gene BVV0102_186687 + 0 NULL GK000005.2:90960753-91030822 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35018 CTGACGTCAGAGAAATACTTCATGTGGAATTTAGCAAAGCACTGATCCTTCTATTTCCTC Gene GeneID:509687|KDELR3:XM_002687924:139_cdna Constitutive 0 NULL GeneID:509687 5 GENE KDELR3 NULL KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 EMBV3_33664 CAGTTTTTTGTGCTTTAGTATGTTTTCTGGCCCACTGCTGCCCCGGTACCTTAAGTGCCC Gene BVV0102_323711 + 0 NULL GK000012.2:13266311-13381779 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034550 TCONS_00034554 TCONS_00034556 TCONS_00036199 TCONS_00034552 TCONS_00034555 TCONS_00034553 2 XLOC_020706 XLOC_021107 Coding TCONS_00034556 XLOC_020706 Coding Coding DNAJC15 12:13184224-13268084 j TSS25506 2358 1 TCONS_00034556_1 59 0.149279050042409 6 0.971952920974493 4.87467160606901e-07 3.99454562719972e-08 9.57811518146118e-16 0.000457973333138464 0.00119315880745778 5.46182121814413e-12 0.00192804361630009 0.00136171556041943 0.00192220247565012 0.000875548919626752 0.000665628502898458 2.55241750244768e-06 7.10015049246907e-07 1.64844357309683e-08 1.69591446129492e-06 0.00123274697184907 5.27756316262804e-08 5.13561115239539e-09 0.00182063402544458 1.18818624245204e-06 4.44534754487764e-07 0.00327752295260529 0.00288563160527326 0.00294841906943672 1.65212653741335e-06 1.52179673674371e-07 0.00144623887481281 0.00109770287319747 0.000892194680055538 2.06337188296016e-07 NM_001080332.2 DNAJC15 Bos taurus DnaJ (Hsp40) homolog, subfamily C, member 15 (DNAJC15), 0.0 908 100.00 0.212892281594572 NM_013238.2 DNAJC15 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 15 (DNAJC15), mRNA. 0.0 1108 71.50 0.946140797285835 TCONS_00034556_1 sp|Q9Y5T4|DJC15_HUMAN DJC15_HUMAN DnaJ homolog subfamily C member 15; 6e-32 111 88.14 0.983050847457627 1 noncoding 1 1 1 1 -0.382500031704042 0.471758307802664 -0.007745935274402 0.886734541602847 AGGCCAGGGGAGGCTTCTTGGAGAGAGCGGTGTAACCTTCGGTGTGAAGCTAAGATCTGAAGATTGAGTAGCAGCAAACTCGGCAAGAAGTTTGATAGCTGTGGGGCTGGGTATTGCAGCTCTTGGCTTTGCAGGTCGCTACGCATTTCAGATCTGGAAACCTCTAGGACAAGTAATCACAGAAACTGCGAAGAAGATTTCAACTCCTAGCTTTTCATCCTACTATAAAGGAGGATTTGAACAGAAAATGAGTAGGCGAGAAGCAAGTCTCATTTTGGGTGTAAGCCCATCTGCCAGCAAGGCCAAGATTAGAGCAGCTCACAGGAGGATCATGATTTTGAATCACCCAGATAAAGGTGGGTCTCCTTACTTAGCAACCAAAATTAATGAAGCAAAAGACCTGCTAGAAGCAACCACCAAACACTGATGGACGCTCAAGGACCACTCTGAGGGAGAAGAAGGGGGGCCTTATAAAAGCTGTCCTGCACATTAGTCTAAACCGTGGCATTCACAATTTCATATGTGCACCGACCACAGCCATTTCTTCCGTGTCTGAGCTATGTGATAATAAAAGATGAACAGTCTAGCTTTGTATTCGCTTTCAGAGGAGCACATGGAAACTCTAGCACTGATCTTTCCCCCTCATTTTCTTCCTCTCTCTGATAGTCATACATTTGAAGACTTCTACTACTAAGTTCCCCCGACCCCAGCCCCTGCAGCAGTATCATTATCAGTAATATAATTGGAATTTGGGAGCAAGAGTGTAGAATTTTTTGCTGCTTATATTTATGCTCGCATTGTCCCTTGTTTCTTCAAAGGAATTTAGCACTCTGCCTATGTGAAGTGCTTTAAATGTTATGAGACGAAACCCTGACTGCCACCCCAGGAAAGTGAACTGAAGCTTGATGGAATTTACTAAAGGGTGTTTTGTAAAGCAGTGGTTAGGAAAGAACGCTGCTCTCCCAGAGATCCCAAGGCTGTAGCATGAGAACTTGGAGAGCTGCTAAAATGATTAAAGGTTTACAGAATGAGCCCTGTGAGGAAAGCCTGGAAATTGCTGGGAGAAGTCTGAGGGATTCGTACTTAATTATATAGTCTTCTGGTGCTGTGTACTTATTCAATTATGCATTCTACAAATATTTATTTACCACCTGTAGCGGGTGAGGTACTGTAGGGGTCCTCAGGAGTTCCAGGTGTGAACCAGGCACGGATCGTGACCCAAAGGAACTTGAATTTAGAGGAAAGATAAACCACAGGAGTACTATTAGAGAGGCACAGATGATAGGCAAAGAAGTTCAAAATAAAAGACTATTTTACACTGGGCATCAGGGGGGCGTGTCATAGAATCAGTAGCGTAGAGCTGGGCTTTAAAAACAATGAGATATACCATATGATGGGTGAGTCAGAATTAGCAGAAATAGGGTATATTAGTTCATTGGAGTGCAGGGTTTCTCCAAAGTAACGGATGAACACACAGTCTGGAAGGGCTGGCCCTGTAATGTGCAGTGCATTCAATTATTTTTTTTTTCCCCCTCAACACAGCCCCTGGTTATCATCACTTTTCTAAAAGGGAGAAAAGAGAGAGTCAGAATACCAGCATATTTCTTGTACTGCTTTACGACGCTGGGCTCATCCCAGGTAAACAGAACTACCACGTTTCATCTGTCTTAAACGCTCTTGTAATAGTCTAGAGGCATCTTTCATTTTACGACATCCTGTAGTTGGGAGTTCTCAGCATTGGTGATACTGACTCATTGAGCTGCTGATTCCTGCTTGTGGGGGGCTCTCCTGTGTATGGTAGGATGATTAGCAACATCCCTGCCTGCACCTACGAAAGGCCAGGAGCGCCCCCTCTGTTGTGACAACCGAAAATGTATCTAGATGTTGCCAAACGTTCCTTGGAGGGCAAAATTGCCCCAGGTAGAGAGCCACTGCTCTAAATGTTAACCGTGTTCTCCTTTGGTACATGAAATAATGGATGGCCTGACTTGAAATTGATTCTTAGGTTCACTGAAATACGGCTCTCGCTTTAAAATCCCCTGTGTGTCACAGTTTTTTGTGCTTTAGTATGTTTTCTGGCCCACTGCTGCCCCGGTACCTTAAGTGCCCTCCTGATACCCAGATCTCCACGTGTTCAAAGCCTGGGGATAGTTGAAGGCCAAGCTGAAAAGTCTGTCTCTCCTTTTCTGGTGCTTCCAGCAAAAGTAATCCCATGAATTGTCAGCTCTCAGCAAACAAGGATTGTATCTGTCTTGGTCACTGCTACATTGACACTCAATAAATATTTGTTAAATGAACGAATACATTCCCGTAGCACTTTATTCTTCACATTTGGTAACTTGTGAAACAACTCTTTGT EMBV3_07037 ACAGCGCCTGCAGTTTGGCGTGAGACTCCTTGGTGAACTTGTGGTTTTCCAGGATATGGT Gene GeneID:100138538|LOC100138538:XM_002691034:406_cdna Constitutive 0 NULL GeneID:100138538 10 GENE LOC100138538 NULL hypothetical protein LOC100138538 EMBV3_03581 CCTGGGAGCCAACAACTATGATAGCTTCGAGATGGACTGGCTTGTGCCTGCCACCTGTGA Gene GeneID:507525|VTN:NM_001035050:73_cdna Constitutive 1 NULL GeneID:507525 19 GENE VTN MGC128203 vitronectin EMBV3_10546 GAAAACCAATTTTCCCCTAGAGACTCCCAGAAGAACGCAGCCTGGCCAACACCTTCATTT Gene BVV0102_311373 + 1 EMBV3_36422 GK000025.2:17407208-17411488 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08899 CCTGGGAGACAGCGCTGTGGGCAAGTCCAAACTTTTGGGACACAGCAGGCCAAGAGCGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01423 CTTTGATATCTGAGCCAGAGGATCCGGAATTTACCCTCAAGTGTCTTAACCTGGGCCTGG Gene GeneID:539821|LOC539821:XR_084595:597_cdna Constitutive 0 NULL GeneID:539821 16 PSEUDO LOC539821 NULL similar to espin EMBV3_32329 GGTGCTGTTTGTAGACACTTAACACCCATGAAAGCCCAGCCATCATGACAAATCCTTGAG Gene GeneID:614795|FKBP1A:NM_001035456:1279_cdna UTR3_Alt 2 NULL GeneID:614795 13 GENE FKBP1A FKBP1B FK506 binding protein 1A, 12kDa EMBV3_34429 GGCAAGAGAGTGGGTCAGCCCCCACAGAAGAGGTCTTGGCCGGTTTTCTTGACTTAATCA Gene GeneID:100336519|LOC100336519:XM_002688275:32_cdna UTR3_Alt 2 NULL GeneID:100336519 6 GENE LOC100336519 NULL FIP1L1 protein-like EMBV3_06865 GCTGAGTATTGGGCAGTCTCATCTCTCACTGGTGAAAATGTCCGGGAGTTCTTCTTTCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35535 CAGGGCCGAGCAGTCGGAGAGAAGGTGAATGTCCTATACTCCATAATTCCCAGCCAGTAA Gene GeneID:514243|HECW1:XM_002686917:145_cdna Constitutive 0 NULL GeneID:514243 4 GENE HECW1 NULL HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 EMBV3_24860 CTCCTTCAGCGCGACCCACCGCCTCCACAGGAGGCAATTATGAAGCCCCTTGATCATAAG Variant GeneID:506860|PTS:NM_001113537:47_cdna 126^285 1 EMBV3_08615 GeneID:506860 15 GENE PTS NULL 6-pyruvoyltetrahydropterin synthase EMBV3_30606 CAGGGCAGGACTCTGTCTGGTACTTTCCAGCTTTCTTCTACCAAGGATTCACCACAGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07654 TCTTTTGTAAAGTAGGAGCAGGGGTGTGGTGGGAACTGGGTGCAAAATTCTGGCCTCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06778 ACCTCACCTTCAATGACTTTGTTGACATGTTTTCTGTGCTCTGTGAGTCAGCTCCCCGCG Gene GeneID:100337259|LOC100337259:XM_002696664:281_cdna Constitutive 0 NULL GeneID:100337259 21 GENE LOC100337259 NULL calcium and integrin binding family member 2-like EMBV3_16081 AGGTCCAGGTCCGAAAGTCAAACGAAGTAGGATTCTGCACTGGAACACAGAACCTTGTCC Gene BVT0102_431354 + 1 EMBV3_07206 GK000005.2:112607539-112612769 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38659 AGAAAGAGGAAGAGAATGGCAATGAATGGGCAGATAGCAGGCACTGGCCTATAACCTGGC Gene BVV0102_360529 + 0 NULL GK000010.2:14652698-14878654 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13284 AGGTGGCCCAGAGAGGATGGGCATGCTTATTTCATCAGCCACTTGTCAACTGCTTAAACT Gene GeneID:508530|PSMC3IP:XM_002696029:485_cdna Constitutive 0 NULL GeneID:508530 19 GENE PSMC3IP NULL PSMC3 interacting protein EMBV3_18116 AGGGAGCACCCCCTTACTTTGGGCAGATAGTGGAGTCAAGGGTGGGTAGCACACTTTTAA Gene BVV0102_064834 + 0 NULL GK000007.2:54454316-54624663 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08600 CCCGCCCAGTTCTGGCTCTATCTCCTCAACCTGGGAAAATGTATTGTGATCAAGAGTACC Gene BVT0102_404224 - 1 EMBV3_11683 GK000029.2:18067907-18074820 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13874 GGACTCCACAAGGGAAGAGAAGGAACGGTGGATCCGGGCCAAGTACGAGCAGAAGCTCTT Gene GeneID:522241|AGAP1:XM_002686575:35_cdna Constitutive 0 NULL GeneID:522241 3 GENE AGAP1 AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 EMBV3_12640 GGCATGCGCACTTGTGACCTTTAAAATGTGCAGAGGCCTGAAGCTTAGTTATGCCAGTGC Gene BVT0102_169358 + 0 NULL GK000005.2:10305695-10330468 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193962 TCONS_00193964 TCONS_00193963 TCONS_00193965 1 XLOC_117635 NonCoding TCONS_00193963 XLOC_117635 NonCoding NonCoding - 5:10311053-10318241 - TSS144844 5005 6 TCONS_00193963_1 73 0.461538461538462 2 0.303882009183247 0.000885643788232288 0.00109105316736902 0.00135931437748962 0.00102003320913564 0.000807260594443403 5.09662889920641e-05 0.000657613193743701 0.000512733157728308 0.000315270409111605 0.000214650804889017 8.35945331018967e-06 2.42903529320373e-05 3.32500627889388e-05 0.00050684998105143 5.99875651784507e-08 0 1.72788251034072e-10 0 0.00141679286920596 0.000496773107371754 3.1660879375398e-05 0 0 0 0.00123441712364569 0.00150738796250521 0.000959390226353137 2.98411622932006e-10 3.89216569723046e-10 0 XR_234480.1 LOC101908159 PREDICTED: Bos taurus uncharacterized LOC101908159 (LOC101908159), 0.0 1357 100.00 0.15004995004995 0 noncoding 0 0 1 1 -0.104327168826224 0.422776778577654 -0.000793693130492934 0.989922401145977 GTAACCCATGTAAGGTGGCTCAAGACAGTAAAGAATCTGCCTGCAATTCAGGAGATCTGAGTTTGATCCCTGGGTCAGGAAGATCCTCTGGATAAAGGAATGGCAATCCACTCCCATATTCTTGCCTGCAGAATTCCATGGACAGAGGAGCCTGGAGTTGGACGCGACTGACTAACACTTTGTCTTTCACTTTCTTTTCAATACATTTATGACAACTTTGAAATGATCACAGTAGTCTGTCTAAGGTGCTGTTGAAATAATCAGGCCTCAATAAACTTCTTAGAACAGAACATGTAATAGTGGAACACATAGTAGAGCAGACCTCTCCTTTCATGTGACTTAATTAAGATCTTTTGATGAACTCACTTATTAAATATTTTTTTGTAAATTACATGTAATTCAGGCCTAAACTCTGAGAGTGAAATGGTCGTACTTCTAGCCAATGCCATTAACTCCCCAATTGTCTTATTAAATAGCTTCATGAAAACATATTTATTTATGGTTGAGCTGGGTCTTCATTTTTGCTCGTGGGCTTTCTCTAGTTGCTGTAACTGGGCGGTTACTCTGTTCTGGTTCCCAGACTTCTCACTGCAGTGGCTTCTCTTGTTGCAGAGCACAGGCTCTAGAGCATTTGGGCTTCAATAGTCGTGGCTTGTCGGCTCTAGCACGGGGCTCAGCAGCTGCAGGGCACAGGCATAGTTGCTGTGAGGCGTGTGGAATCTTCCCAGTCCAGGGATCAACCCCGCGTCTCCTCCATTGGCAGGCAGGTTCTCTACCACTGAGCCATCAGGGAAGCCCTAAAGTTCACCGTTTTAAAATGTGTCGGTCAGCGGTTTATAGTATTTTCACAAAGTTGTACAATCATCACCACTATTTCCATCATCCCAAGAAGAACCCTTGTTCCCATGAGCACTCACATCCCACTTCCCACTCCGTTCCTGGCAACCACTAATGAACTTTCTACAGATATGCCTATTTTGGATATTTAGTTTAAGTGGAATCATTGCAATGTGTCTGGCTTCTTTAGAAACCATGGGTGAAATGGCACTTCACTTACCTTCTCTGAACAAGGTTTTAAGATTTTCACGTCTTCCAGGCAGCATGCAGCCTGAACAATAAGATGCCTGCCTGAGTTGTTTTCCAGGAACTTGGAGTCAGCTGCACGTAGTTAAGGCTGAGCCAAGAGTCAGCTGTGTCTAGTTCAAGCTGCGCGCCTTAGGGCTAGAAAGGACCCCTGACCGCTGGTCTGGGCATGCGTAGGCATGCGCACTTGTGACCTTTAAAATGTGCAGAGGCCTGAAGCTTAGTTATGCCAGTGCTGTACAAAGATTGTCTTGGCTTCTCCGAGATGATTTGACACCTATTTGCCCATCTCCTTGCTTTGCTGCAAACTTCAGCGTCTCACCGTTTTGGCTTGCTGCGAGTTGGGTAAAACAAACCGAAAGTGAGGGGTTATTGAAGCCAGCCTGAGTCTGTCTACTTTGTGTCTGCCCCCGAGGAAGGGCGATGCTTCTAAGCCTGGCTGGCCAGTAGGACCCTGACTCCTCGTGACCCGCTTCCCTTCCTCCAGCTTTCCTGGATCTGAGCGGTGCCAGCTCCTGGCTTCTCTTCAGCCTTGCCCCACCTGCCCGCTGTGATGCGATGCCTCCTCCTGGCCCACCCGCGTGTGTCCTGCCTGCCGGACTCACCACCTGCTGTTGCTTACTGTCCTCTCTGGCCCTGGTGGCTGCCTCCGTGTGTGTACAGATTGGCAGCCGAGGCCAGACCCGCCTCTACATCTCAGCACCTGTCTCACCTCGTGGGATATTTGGTTCCAAGTTTCTTTTGAAACTGTGCCTCCCTGCTTTTATAGTCTAATTAGTTTTGATGGAGTCTTTGAGGGGGGGGGAAAAAACATGTTAAACCCCTACCTTTCTCCTTATGGAGTAAATATAATGTAATTAAAAAAATGTTTTGAGTACTTTGGCTGTAATATTTCAGTGGCTGTTGAAATATGTTGAATTTCTATAAGTGATCCCCAAGTTTTATGTTTTGAAGGCTTACATGCTTTTAGGAAGTGAGATGTGTGTTGGTATGCACACAATATAAGGATATTGGCCATTAACTCTGTTTACAAACTGCTGTGTACGGGGAAATCATGTTTGCTGAAGTGTCTATAAGACAAAAAGTACTATTGAACTAGTTTTTAGTATGTCGTCCGATTGTACAGAATTCCTTTTTGTACTTTCAGTTGTTCAAAGGATTTTTGTCTGCATACTGTTAAGATCTTAGTTTCATTCTGGGTAACTGGTGATCCTGAATAAATGACAAATTACTGTCTGCTCAGTGTCCCTGCTCCCCTACTTTCATTTATCTTTGACCCAGTAGTGCTTGTTTGCTCCTTGAGAAGATATTTTAGCAAGTGGAGATTGGTAAGAAAATACACTGCTGCGTAGGCCACATTATTTTACTTCTTCTAAGGGAAACTTTCCAATTGCACGTATTAGTTCAGGTACATCTCATGCAGAAGATGATGTTATACAAAATGCAATGAGGTTCAAATTGTGAGAAAAAGTTTGTCAGCTGCTTGTGAATAAGGACTATCTAGTAAGAGGGGGAACGTGAGTGGAGGATAAGATCTGTTGAGAATACCGGAGCTAAAGCAGGGTATTGATAACGTGTAGGGTGTGTTAAGGCAGGAAGTATCATAGTTTGGCTTAGGTCTGGAAAATTGGAGTAAGACTGGGAAAAACACTTTCTGAGTTTAACTTAATAGGCAATGTCAGGCTGCCAAATTGGATGGGTAAAATAATAGAGCTGAGAGCTAGGGAGAGAAATCTGGCAACGAGTTCCTGAGATTTGGGAAAACAGTACATCTTGGTTTGAATCAATACATATTGGAGGAGGCAGCAAATTGCAGGAAGAATATCAAACGTGATACTTTAATTCAGAGGGTAGCACTACCACTGGCTGACTATATCGCATGAAAAACTTGCATAAAAGGGCTTATTTTAGATATTCAGAAACGTCTGTTCTTAAGGATGAGAGTAATGAGCGTTCACATGTATGTTCTGTGTCCAAATAGGTGAGATCAAAGCCACTGTGTATCTGATGGTCTCTAGGTGATGCAGTGATGTGTGGTAGCTGATGCTGTAGCCTCTAACGTCAGAGTTCCAGTTTCAGTTCTGGGCAGTTTCACCTATTTGATGTGTAAACCTGGGCAGGTTATTTAACCATTTTTTTCGCTGTTGTTTTCTCATTTGTAAAAGGCAAATCATGATACCTACTACCATGAATTGTCAGGAGATTAATATTTATAAAATCCTTAGAAGAATGCTTGGCACATAATGATTCATTAGAGAAAGCTATTATTATTCATGGTAAATGGAATTATAAGTCTATTTCATGCAAATGATTCATATCACAATTGTAAGTGTATTCTTTAAAATATAAATAACAACTCTGAGAAATAGATGTTGATCCTGTTAGTATGCACCAACTTTATGAATGTGGTGCCCTTAGACTGATGAAGCTCTGTTTTCCAGTATAAGAGTCCAGCAAGTGGATTCACATCTTCCATGGCAGTTCACCCGAAACTATAAATACTAAGTGAATACGAATATAGTTTTTAGTGAACTATAAATACTAGGTGAATAAGAACTAGTGAATCCTGTGGAAAGCACTTGCAGTATGTCAGGTTTTATTTTTAATGTTAAAACACTGATTGCTAGTCCTTTGGGAATGGAGTAAATAATAAAGTAAACATTTTGCTTCATATTGCCCTCATTCAAGCAGATGAGCAGGATACTTTGATAGATTAGTGAAAACAGTACATAAACATTTACATCATTGTAATAAGTTACTAAAGTTTAAATTATACTCACTTTTAAAATTATGAAATATTTAAAACACAAAACTTTAAAGAATAATGTTTTTTATTCATTACTTAATTTTAACAAATCTATGTGGCCGTATAAGCTTTAGACTTTAAAACAAAATTTACAAATGCATTTGAAACCCTTGTGGGCCCCTTGATTTCATGGCAGTTCATCTTCCTCCCTGAGTTCCTCCCATGTCAGAGGAAATCACGATTCTGATGCCCTTACATTACTATTTATGATTTTACATACGTACTATAATCAGTGAATCCATTAAATATGCACTGCTTGTATTTTAAAAATGTATGAGTAGCTTACTGTAAATATCTTAATAATTTTTCATTGTTCTATTTTTAATCAAATATTGAATTATAATTTACATGAAAAAAGCATTCATTGTATGTATACAACTTAAACATATTAACAAATAAATATACCTGTATAAATAACTCTCCTACTCAAGATATAGAACTTTCAGCACCCTCCAGAAGTTCCTTTTTGTCCATTGCAGTCAATTCCCCACATAAACTCTACTCCAGGTACCACTGAGTTGATCTCCATCACTATAGATTAATTTCACCCTCTCAAGAACTACATCTAAATGGACTCTTCCAGTATGTATTCCCCTATATGTCTTCTTTTCACTCAGTATAATGGTTTTGAATATTTTTCCTCTTCTCATGTGTATCAATATTTCACTTTCTTGTCAAAAAATGCCACAACTTATTTGCTCATTCCTGCTGGTGGGTATTTGGATTCTTTCCATTTTTGGCCATTGTAAATAAAGTTGCTAAGAGCACTATTAATACAAGTCCATTTCTGGAAATATATTTTAACTTCCCTTGGATAAGTGAGTAGGAGTGGCAATACTGAGTAATATGGCCATAGGGTATTATCTTTGTAAGAAACAGTCTGTTTCAGAGTGGTTGCACCATATACCACAGCAGTTCCAGCTTCTCCAAATTTGTGCTGGCATGACTTGATATTACCTGTCATTTTTAACTTTAATCATTTGTTAGCATGGTTACTTCATTCTGATTTGCATTTCATTTTCTTGAGGACTAATGGTGTTGAGCATCTTTTCATGTATTGTCCATTTGTGTGTGTGCTATTCTGTAAATATACATGCATTCTGAATACCAATCCCA TCONS_00190902 r 5' 2466 TCONS_00190902 r 5' 0 EMBV3_36142 CCGCAGGCTCCCACGGACGGTGCTTTTTTCGGGAAATGTCTTATCTTTCTACCAGGACTA Gene GeneID:522840|C25H7ORF50:NM_001110078:221_cdna Constitutive 0 NULL GeneID:522840 25 GENE C25H7ORF50 MGC139971 chromosome 7 open reading frame 50 ortholog EMBV3_41613 CAGAATTAGATGAAGATGACCTCGAAGCAGGATGGAGTCCTGGTGGATGAATTTGGATTG Variant GeneID:539781|CHMP5:NM_001034682:49_cdna 528^640 1 EMBV3_42931 GeneID:539781 8 GENE CHMP5 MGC128530 chromatin modifying protein 5 EMBV3_25021 AGCTGTTTGCTGCATATACCCAACACGAACATGCATCTTATAACAACTAAACTGAATGGG Gene GeneID:534471|INTS2:XM_002695604:177_cdna Constitutive 2 NULL GeneID:534471 19 GENE INTS2 NULL integrator complex subunit 2 EMBV3_20174 CCAGTTGTCTAGTTCTTTAAGCAGCAAAACTTGAGTCGGTTCTCAGATATTCCAGCCGGC Gene BVV0102_092391 - 0 NULL GK000012.2:34954971-35627726 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42893 TTTGTGAAGCAGACCGACCACATTAAGGGCATCCGCCAGATCACCAGCGACGACTTCTGC Gene GeneID:520966|GFOD1:XM_002697583:448_cdna Constitutive 0 NULL GeneID:520966 23 GENE GFOD1 NULL glucose-fructose oxidoreductase domain containing 1 EMBV3_39061 CATGCCAGCAGGCCTGATTGCAGGTGCCAGGTAACATCTCCAGGGATAGAATGTTAGGCT Variant GeneID:613802|TMEM14C:NM_001035437:235_cdna 369^702 2 EMBV3_28487 GeneID:613802 23 GENE TMEM14C MGC126931 transmembrane protein 14C EMBV3_42946 CCAGGTCCTATTCTAGGCATAAGGGTGCAGCTGAATATGATGGAAGCGCCTGTTCTGGGA Gene BVT0102_355969 + 1 EMBV3_01687 GK000018.2:55063462-55071167 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24119 GAACATGCCGGTCATCGTCAACACCTGCAGCCTCAGGGAGGAGGGCGAGGGCACAGAGGA Gene GeneID:788459|SOX13:XM_002693901:239_cdna Constitutive 0 NULL GeneID:788459 16 GENE SOX13 NULL SRY (sex determining region Y)-box 13 EMBV3_10476 TGACGGGCGAGCTTTTGGCCCGGGTTATACCTGATGCTCACGTATAAGACGAGCAAAAAG Gene GeneID:100313368|MIR208A:NR_030939:18_cdna Constitutive 0 NULL GeneID:100313368 10 GENE MIR208A bta-mir-208a microRNA mir-208a EMBV3_03925 CTGTGTCCCGGGGCTGTGCCATCTGCAGTCTCTTCAATTACCTCTTCCTGGTGTCCGGCT Gene GeneID:530171|KLHDC7A:XM_002685739:480_cdna Constitutive 0 NULL GeneID:530171 2 GENE KLHDC7A NULL kelch domain containing 7A EMBV3_31154 CCAAGGACCTGGTGAGTTCCAGAACCAAGGAGGAAGGGAGGGCCAAGAAGGAAGACATCA Gene GeneID:784038|LOC784038:XM_002687346:27_cdna Constitutive 0 NULL GeneID:784038 5 GENE LOC784038 NULL similar to H1 histone family, member N, testis-specific EMBV3_28531 CCCACTGAACCAGATGCGGAGGAGGTTTACCAAAAAGGGTCAAACAATGCCACTCTTCTC Gene BVV0102_087796 + 1 EMBV3_33785 GK000016.2:81552389-81602564 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08815 CCTCACAGTGGCCGTGGGGCCCTTGGGAAGATTTTATTGTCAAGACATTCGAGCCTATGA Variant GeneID:534337|SH3YL1:NM_001034607:2_cdna 116^244 2 EMBV3_23568 GeneID:534337 Un GENE SH3YL1 MGC128888 SH3 domain containing, Ysc84-like 1 (S. cerevisiae) EMBV3_09543 CGCGGGGAGAGCTCTTTCCGAGGGAAAGGAAGCGCCGCAGGCTGCATTCCCAAGCTGGGG Gene BVV0101_038962 + 0 NULL GK000004.2:41266153-41640775 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048812 TCONS_00006212 2 XLOC_028943 XLOC_001775 NonCoding TCONS_00048812 XLOC_028943 NonCoding NonCoding - 13:49018692-49019337 - TSS35988 645 1 TCONS_00048812_1 97 1 0 1.05470556467492e-05 0 7.41276963642213e-05 0 0 5.77690039552415e-05 0 4.58505571066637e-06 0.000272178487746958 0 8.87282004216321e-07 8.31556057528012e-06 5.93134807224284e-06 3.16030536889996e-05 3.9436128036391e-05 2.04741304973556e-05 1.28699791788864e-05 2.91754561426782e-05 0 0.000111866731292832 1.68651177652844e-05 5.75244607176062e-06 7.11165666945104e-06 0.000356952247466072 0 0.000255784860341289 3.91475823134471e-05 0 1.75618616030724e-05 5.20440340619046e-05 XR_236255.1 LOC101905928 PREDICTED: Bos taurus uncharacterized LOC101905928 (LOC101905928), 6e-08 62.6 72.52 0.178294573643411 0 noncoding 0 0 0 0 0.0425495311291958 0.704658756308425 -0.00959511421808806 0.842321262614134 CCTGGGCGTTTGGGCTCCCTAGCAGAGCCGCAGCGCAGGGGAACCAGCCCATGATCAGTGAGCTCCGGGCAGTTACTTTGGTCCCAGGTTTGGAGCCCAATGCCCGGAACGCGGGAGAGAAGAGGCTGGCTGCCGGCGGGTGCTTGCAAGGCTGTACTGGGAAGGACCGAGTGAGCTTCCACACCGGCGGAGCTCCAGCTCTGCGCCCAGGCGCGATAGCACAGAGCCCCGGCCGAGAGGCTGCTCTGTGCCGAGCGAGCCTCCCCAAGGCCTGCCCAGCTTCTGGCGTTCGCGCCCGGGAAGGAGCAGGCTGCGGGAGTGTGGGAGCCGTGAGTGGTGCCTGACTGCTGCCTCAGCTCAGCTCTCGCCTTCCCTTCGGACCTAGGAGCCAGGCGTCCTTGCAGAGGGCTTAGGGGCTGGGGGTGTGCACACTGCCAAAGCCTCCCTCGGGGAGAGCTCTTTCCGAGGGAAAGGAAGCGCCCCAGGCTGCATTCCCAAGCTGGTGCTTCCCCGCCCAGACTAAGCGCCGCACGGAGGGAATCAGGGTCCCGGTGCCCCTGGCTTGGGGAGGCAGCTCCACAGCCAGAGTGTTGCTCCGTTTGTGCCCAGAAAGCGCCTGCCAGACCGGGCCTTCCCTGGAGCTGT TCONS_00045373 . 5' 339981 TCONS_00045373 . 5' 339981 EMBV3_33347 TTTCTTCGTGGAGCTCAGCGCAGGGAGGTGGACACACGGCCCTTCAGGGCAGCGGTCTGA Gene GeneID:516664|LOC516664:XM_002685745:497_cdna Constitutive 0 NULL GeneID:516664 2 GENE LOC516664 NULL similar to Miro domain-containing protein C1orf89 EMBV3_17085 CATGCGAAAGAGCACAAGAATCTGGCAGAAGCTTTGTTGACCTACGAGACTTTGGATGCC Gene GeneID:505118|YME1L1:NM_001101850:73_cdna Constitutive 0 NULL GeneID:505118 13 GENE YME1L1 MGC166414 YME1-like 1 (S. cerevisiae) EMBV3_30615 TGGGAGGTCCCGGAGGATGCTGGCCCCCAGCAATCTGATCCGCCCAGGCCTGCAGAGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09661 ACCATGAGAGCACGTCTTCCCTTTACCCCTAGCACTTCACCCAGTTCCTGACACCAATGA Gene GeneID:404076|TKDP1:NM_205776:808_cdna Constitutive 0 NULL GeneID:404076 13 GENE TKDP1 NULL trophoblast Kunitz domain protein 1 EMBV3_02993 AGGAATGCTTCCCCCTCCATTCTCCATTTCTCATCAGCGCCCGCACGCAGTCAACTCCAG Gene BVV0102_099555 - 1 EMBV3_35656 GK000020.2:24140819-24231606 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114837 1 XLOC_069366 NonCoding TCONS_00114837 XLOC_069366 NonCoding NonCoding LOC100847494 20:24195118-24221977 = TSS85542 1366 1 TCONS_00114837_1 34 0.0666178623718887 2 0.94921438677489 0 7.35610140171087e-06 0 0 0 0 0 0 0 0 0 0 0 0 1.55638453611865e-06 0 0 0 0.000204732966958841 5.26458916188196e-06 0 1.62972164356205e-05 0 0.000294546942360327 0 5.15774500669974e-06 0 0 0 0 NM_174010.3 CD36 Bos taurus CD36 molecule (thrombospondin receptor) (CD36), 1e-52 212 72.38 0.317715959004392 0 noncoding 0 0 0 0 -5.69025672391144e-05 0.999599670179554 -0.00771337631006368 0.876204376794305 GCGAGTTCTGCGCTGGAGTTGACTGCGTGCGGGCGCTGATGAGAAATGGAGAATGGAGGGGGAAGCATTCCTGGTGGAGCAGGCTAAGGACATAGCAAGAGCTGGGGTGTAAGAGGGATGTGATATGGCTCAAGCCCACCTCTGCCAACTCAGCATTCATGGGAACCCTGGTGTGATTGAAGTCTGGAGACCCAAGTCTTGGGATGCTGCTGTGTGACCAGCAAGAGGCTTCCTGTCTTGCTACCATCTCATCTCATTATTAGCAAGCTGCCTGGACGGCTGGGTTGCATTCAACCCCTCCTTGCATTTTCAGCAGGGCTTTGTCCATAACAGACATTCAGTATCAGTGGAGTTGAATCTTCAAGAGGGAGACTAGGGAAGTCTAACTTCAGTGCCCCAGTAGGGACTAGCAGTGGATTCAGAGGCAAGGCAGAAAGAGTCTTGAGAATTTATCAACCACTCTGCGTGAATGTGAGGAAGACTTACATGATTCTAGGTTCCTATGTCCAGGGGGGGAAATATTAAGAAGAGAGGTGGTTAGAATGGGATTGGTGTTAGGGGCATGATAAATTTGGAGTGCTAAAAAGTCATCAGGTGGCATTGTCCAGACACAGTTTAAAATTGTGGGAACTGGTACTTGAGAAAGAAGCCAATCAGAGATGTCCATTTGGGATTGTTCTTGCCCATCTTGTTGGCCGTGGCTTATAAATCATCCCCAAATTGATCACTCTTTCCTCTGACACTGTTACCCTGGTCCAAGCCACCCCGATTTTTTACAGATGTGTCTTACCAAGTGTTCTTCTTGTTCAGGCCTTTGGCCTGCTTCTGACCTGCCTGGACATTGCCCAGACTCCATGCCTGCCTGCAAGCACAAGTCAAAGTGAGTGGCCCTTAGAAGTCTTGAGCCCTTGGAAGTCTGGTCAACCCCTCAGGGTCTAACGAAATCCTATGACTCACAAGGTGAAACAAACAGCACTGTAAAAAGGTTAAAGTAAAACCAAAGCTGCATTTTTGGCTGAAAACTGATGATGGGATTATAAGCAGGAGCCCCAGAACTGCAATCTGAAGACTCACCCATGGAGTAGACACACTGCTCAGGACCTTTTCCCAGTGGGGACTGCAGATTGCTATTAATGAGGGACTTCCCAGCGCTATTCATCTCGATGTTGGTCGACCTAATTTTGTGATATCTGTGCTGTTACTGTTTTCTATTGTTTCTATTTTCCTTTTCTTTTAATGATTGTATACTTAAGTTAAATAATCCTCTATTAAATATTGAAATTGTTTATTCTGTGTATGTTGAGTAGTTTCTTTTGTTAACGAATCCTTCAAACCTAAAACAAAAATAAAACTTGCAGTAAAACAA EMBV3_19612 AGCGTTACACCACCTGTTCACCTGCCACCCACTGTGTAAGCCAGTCTCAGTCTTGTTCTT Gene GeneID:540449|LOC540449:XM_002696759:416_cdna Constitutive 0 NULL GeneID:540449 21 GENE LOC540449 NULL similar to Uncharacterized protein C14orf152 EMBV3_15454 AGAGATGCCTGGGCCTGCAGGAGTCCAGCATTGCTCAAAAAACGTGTGTTCTAGTGAACA Gene GeneID:618214|HOXB3:NM_001099174:174_cdna Constitutive 0 NULL GeneID:618214 19 GENE HOXB3 MGC151510 homeobox B3 EMBV3_00913 TGAGGACCGCTTCAATGGTACCTACATCATCTTCTTCAGCTTGGGCATTGGCGGCCTGCT Gene GeneID:100336756|LOC100336756:XM_002698909:94_cdna Constitutive 0 NULL GeneID:100336756 28 GENE LOC100336756 NULL solute carrier family 29 (nucleoside transporters), member 3-like EMBV3_00123 CAGTGTCGCCTGTGTTCCTCCACCCAACAGGTCCCCAAAGCATTTGTGAACCTAGTCGAT Variant GeneID:506508|PLB1:XM_002691496:425_cdna 421^483 1 EMBV3_16552 GeneID:506508 11 GENE PLB1 NULL phospholipase B1 EMBV3_08218 AAGAAGTGTAAGGTTATATGTGTGGCAAACACTGGGGATGCCAGGGGCTGTAAGCTTCCG Gene BVT0102_432797 - 1 EMBV3_25734 GK000005.2:110484830-110486530 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17982 GGAACAGTTTCCTTTTTTAAGGAATGGTATAAGACTATCTTTGGAGCCGCCTTTTTTTTC Gene GeneID:615197|PCNP:NM_001038205:26_cdna Constitutive 2 NULL GeneID:615197 1 GENE PCNP MGC128940 PEST proteolytic signal containing nuclear protein EMBV3_43373 TCGGCTTACAGTTCAGGATATACAAGCTCTGGAGCACAAACCAGCTGAGGCCAGCATGAT Gene GeneID:506007|PEX12:NM_001083378:215_cdna UTR3_Alt 2 NULL GeneID:506007 19 GENE PEX12 MGC137914 Peroxin-12 peroxisomal biogenesis factor 12 EMBV3_25727 GAGTGTATGTTAGCTCTGCTGCTACCCACAGCTCCCAGTCAAGTGCAACAGCATCAATGA Gene GeneID:507726|LOC507726:XM_002688610:384_cdna Constitutive 0 NULL GeneID:507726 7 GENE LOC507726 NULL similar to CfOLF4 EMBV3_12661 CTGTGGGCAGCCCTGGACCAGCAAATGCTGCAGGAGGGGATCGAGGCCTCGCTGCTTGAA Gene GeneID:507674|RHBDD3:NM_001080238:47_cdna Constitutive 0 NULL GeneID:507674 17 GENE RHBDD3 NULL rhomboid domain containing 3 EMBV3_42623 TTCCTGGCCTAGTACACTTAGATTTCAAAGTTAAGAAATGGAGCTTTGTTCTTACGGAGC Gene BVT0102_181283 + 0 NULL GK000010.2:70788175-70797327 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23963 GGAGGCTGACGAGCTAGACCGGCTGGTGACAGCCGACCAGAGCCTTACCCAGGAAGTCCA Variant GeneID:615252|NOL12:NM_001046557:97_cdna 303^460 2 EMBV3_21970 GeneID:615252 5 GENE NOL12 MGC137139 nucleolar protein 12 EMBV3_41282 AGGCAGAGAGAGCCAGAGTTTCATAAGGAGGTTTCTAGGGGCAGAACCTAAAGTGGCATG Gene BVV0102_304125 + 0 NULL GK000022.2:54337447-54368492 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22909 AGCAGAGGTTCGCCTAACATTCTAACATTCACCACAGAAGCGCCCGTGCCGGGTTTCTAA Gene BVV0102_093647 - 1 EMBV3_08697 GK000029.2:29621749-29630842 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42766 TGCGGGCGTCATGTCAGACAACGAGGACAAGAGGGCCAGGAGAACGTTGAGATTCTCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16306 CTCCTCCAGGCGTATAAATGGTCAAACAAGATATGTTGACGACGTGATTAGCCGCATCGA Variant GeneID:525389|MED27:NM_001040546:130_cdna 375^505 3 EMBV3_17846 GeneID:525389 11 GENE MED27 CRSP8 MGC134262 mediator complex subunit 27 EMBV3_01583 CCACTGGTTTTGACCTAGGAGGCATTAGAACTATGCTGTTCAATTGGTAGCCACTTTTAA Gene GeneID:540456|C24H18ORF10:NM_001102244:115_cdna Constitutive 3 NULL GeneID:540456 24 GENE C24H18ORF10 MGC152138 chromosome 18 open reading frame 10 ortholog EMBV3_30404 AGGCAGGCGAATCCCTGGCGTTTAGAAGCAACTATAGCCGGCCTGATTGATCATGGCCCT Variant GeneID:523966|CYB561D2:NM_001014937:208_cdna 94^483 2 EMBV3_00019 GeneID:523966 22 GENE CYB561D2 MGC137791 cytochrome b-561 domain containing 2 EMBV3_22599 CGCACCTGCGTGCCGGTCTTTTGTACTGTAACTACCTCATGGTTTGAGTGATGGTTGTAC Gene GeneID:784894|TGFBR3:XM_002686233:245_cdna UTR3_Alt 2 NULL GeneID:784894 3 GENE TGFBR3 NULL transforming growth factor, beta receptor III EMBV3_34992 GGCCTGGGGGTTAATACGGGTGTGAATCTTTACAAAGTGATGGAAGCTGGTGACTTCATC Gene GeneID:535508|HMGCLL1:XM_002697171:197_cdna Constitutive 0 NULL GeneID:535508 23 GENE HMGCLL1 NULL 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 EMBV3_30972 CCGAGTGAGGTATGTTTTCTGCACAGCCCCTATCAACAAGAAGCAGCCTTTCGTCTGTTC Gene GeneID:505988|SUPV3L1:NM_001101862:284_cdna UTR3_Alt 2 NULL GeneID:505988 28 GENE SUPV3L1 MGC151854 suppressor of var1, 3-like 1 (S. cerevisiae) EMBV3_00270 ACAAGAATCATCCATTCCCTTCTCCAGGGGATCTTCCAGCCCAGGCATCAAGCCAGCATA Gene BVV0102_046749 + 0 NULL GK000013.2:43635273-43654788 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02474 GAACATGTGATTAGGTTGGGCTGTTTCAGTAGACGGAGGTACTTGTTAGCAGTAACCACG Gene GeneID:515220|MSL3:XM_002700440:2_cdna Constitutive 0 NULL GeneID:515220 X GENE MSL3 MSL3L1 male-specific lethal 3 homolog (Drosophila) EMBV3_40244 GGATACCGCCTTAGCAGAAACAGGAGCAAATTTGAGTGTTGGACAGAGACAACTGGTGTG Gene GeneID:100337129|LOC100337129:XM_002691940:2_cdna Constitutive 0 NULL GeneID:100337129 12 GENE LOC100337129 NULL CG11897-like EMBV3_31623 TGGACCATGCTCTCACAAGTCTCTTCCCTAAAACCCGTTATGCTGCTGGAAAAGATGCCA Gene GeneID:282851|DHRS9:NM_174733:193_cdna Constitutive 1 NULL GeneID:282851 2 GENE DHRS9 RDHL dehydrogenase/reductase (SDR family) member 9 EMBV3_29697 GTTTGCCAACAAGCAGGACATGCCCAACGCCATGCCTGTGAGCGAGCTGACCGACAAGCT Gene GeneID:511918|ARF5:NM_001083671:170_cdna Constitutive 0 NULL GeneID:511918 4 GENE ARF5 MGC148440 ADP-ribosylation factor 5 EMBV3_02344 TGCACCAACTTCTCCAGCTCGTCGGGGCAGATGTCAGGGCAGTGAGTGAAGCCGAAGTAC Gene GeneID:100138428|LOC100138428:XM_002687987:86_cdna Constitutive 0 NULL GeneID:100138428 5 GENE LOC100138428 NULL hypothetical protein LOC100138428 EMBV3_19792 GTGTCCTGTGTGAGATCAAAGAGAAAACAGGCATGTAATGAATTCACTACACACGTGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03192 AGATATCTCCTGGCATGGGCACATGTTGGCTGCAGTGGTTTCAGAGCTCCTGGGCAGATG Gene BVV0102_236366 + 0 NULL GK000005.2:33654584-34028552 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15841 ACCAGCGTTGGGTGGACTTTGGGCTACATGCTGAACCTGACCAACAAGATTCCAGCTGAA Gene GeneID:282223|ENTPD1:NM_174536:51_cdna Constitutive 0 NULL GeneID:282223 26 GENE ENTPD1 MGC134316 ectonucleoside triphosphate diphosphohydrolase 1 EMBV3_02727 CGACTTCCACTCCGTCACTACAGGAAGTTTGTCTGATCTCTAGGTTGGATACGTGGTAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04976 TATCATCACTGTGGCCATCATCAGCCTTGACCGTCGCCTCCACACCCCCATGTATTTCTT Gene GeneID:530601|LOC530601:XM_002685875:30_cdna Constitutive 0 NULL GeneID:530601 3 GENE LOC530601 NULL similar to olfactory receptor MOR267-8 EMBV3_23350 GACATTGTACTGGTGGTCTTTGCTAGTTTAGTGGAAGCCCTCTGCCTTCTAACAGTTCTC Gene GeneID:529511|LOC529511:XM_002697654:60_cdna Constitutive 0 NULL GeneID:529511 24 GENE LOC529511 NULL similar to olfactory receptor 1160 EMBV3_36359 AGGCACCCAACACGGGAGCACCGCAGTATGCAAGACAAATGCTAACAAGTATGAAAGGAG Gene BVT0101_003099 + 0 NULL GK000017.2:21279075-21513530 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00210178 TCONS_00233373 TCONS_00010367 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00200531 TCONS_00022064 TCONS_00056147 TCONS_00116799 TCONS_00250553 TCONS_00019991 TCONS_00098385 TCONS_00165811 TCONS_00032587 TCONS_00148253 TCONS_00197973 TCONS_00141355 TCONS_00070841 TCONS_00031938 TCONS_00207228 TCONS_00239410 TCONS_00177994 TCONS_00141464 25 XLOC_131641 XLOC_128688 XLOC_142855 XLOC_005918 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_012735 XLOC_033950 XLOC_070965 XLOC_153496 XLOC_010669 XLOC_058631 XLOC_100651 XLOC_018827 XLOC_090135 XLOC_119632 XLOC_085783 XLOC_042618 XLOC_018183 XLOC_125746 XLOC_146076 XLOC_107767 XLOC_085892 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_16220 ACAGGTACAAAAGGTGGAAGAAATCAGTGGGCACAGCTTGACAGTAGTTTGTGAAAAAGC Gene GeneID:527595|MCM10:XM_002692097:302_cdna Constitutive 0 NULL GeneID:527595 13 GENE MCM10 NULL minichromosome maintenance complex component 10 EMBV3_40070 GCCCGCGGTGATGGTGGTTAGCAAGATGAACAAAGATGCGCAGATGAGAGCAGCGATTAA Gene GeneID:614069|ENY2:NM_001034747:50_cdna Constitutive 2 NULL GeneID:614069 14 GENE ENY2 MGC128580 enhancer of yellow 2 homolog (Drosophila) EMBV3_03780 TCGGATACAAATAACTTTCTATGAGGAACACTGAAGAGGAAGAACAAATAATGAAGCAGC Gene GeneID:509227|FRK:XM_002690084:40_cdna Constitutive 0 NULL GeneID:509227 9 GENE FRK NULL fyn-related kinase EMBV3_35334 CCTCCTCCGAGAACAGAACAGGCGTTCCGGCCTGGCTTCCTCAGCTTTGTGCAAAATAAA Gene GeneID:510496|PLAC9:NM_001038521:296_cdna Constitutive 1 NULL GeneID:510496 28 GENE PLAC9 MGC134235 placenta-specific 9 EMBV3_38694 CCGGTCACCAACGGGACCAGCTCGGCCCAGGATGGCAGCACGTGGAAGCGAGATCCTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34572 AGAATTGTGTCCCACTCTACGATGACGCCCTCTCCCTCTGGACTTCGCAGAACCTGAATG Gene GeneID:617215|PTPN18:NM_001078069:19_cdna UTR3_Alt 2 NULL GeneID:617215 2 GENE PTPN18 MGC151912 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) EMBV3_09115 TAAGCGGGTTCCACAAGTGTTGTGATTTGTCTTAGGTGCCCCACCCAGGTAATGAGTGAC Gene BVT0102_291440 + 0 NULL GK000003.2:104181544-104311407 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00991 AAGAGGTGTTAAGTGAAGAAGAAAGAGCCCTGGCTCCGGCGTCTGTGTGGGCAGCTCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36338 CCCTTGGTCTCTGACACAATGATCTCTGAAAATCCCTTCTAGCCTTAAGAGCTTTTTGGC Gene GeneID:615376|EPDR1:NM_001102288:81_cdna Constitutive 2 NULL GeneID:615376 4 GENE EPDR1 MGC165819 ependymin related protein 1 (zebrafish) EMBV3_06405 GCCGACACCATTGGCGTGTCTCTTATTAAGGTAGCAAGAACCAGGCTCATGGACAGCTTC Variant GeneID:525042|GPD1:NM_001035354:83_cdna 397^535 3 EMBV3_17819 GeneID:525042 5 GENE GPD1 NULL glycerol-3-phosphate dehydrogenase 1 (soluble) EMBV3_37608 TGGTCATTGTGTCCACCCTTCGTGTCAGGGTTTATTGGGGGCCTGCTTTTGGAAATGAAG Gene GeneID:539055|TSPAN14:NM_001046448:383_cdna Constitutive 0 NULL GeneID:539055 28 GENE TSPAN14 MGC128839 tetraspanin 14 EMBV3_13488 CGGCGACCCTATGCCAGTGGGGTCGCCCAGGTATCTAAGTCCTTTGCTGTGGGCACGTTC Variant GeneID:282130|ACADVL:NM_174494:21_cdna 142^207 1 EMBV3_06207 GeneID:282130 19 GENE ACADVL NULL acyl-coenzyme A dehydrogenase, very long chain EMBV3_22712 ACTGATGCATGCGTGACTCCTGTGCTGACTTTTGAAGAGGTTACCCATCATGGTCACAAC Gene GeneID:540376|AMACR:XM_002696385:115_cdna Constitutive 0 NULL GeneID:540376 20 GENE AMACR NULL alpha-methylacyl-CoA racemase EMBV3_04564 GAATGGGAGCATTACTGGTGATAGTGCGAAAGCGCAACGCACGGCGTCTAATTAGATGCG Gene BVV0102_458944 + 0 NULL GK000021.2:66558348-66591696 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125324 1 XLOC_076866 NonCoding TCONS_00125324 XLOC_076866 NonCoding NonCoding - 21:66590217-66591035 - TSS94083 818 2 TCONS_00125324_1 58 1 0 0.000182961650701605 0 0.000181007226418212 0 0 0 0.000342202790420716 0 8.68107383618485e-05 0 0 0 0 0 0 0 0 0 0.00130619621258142 0.00690131298723702 3.71116228438357e-05 0 0 0 0 0 0.000279347961017063 0 0 0 0 noncoding 0 0 0 0 0.005240101087153 0.973307452068369 0.0318716480269626 0.632847194503012 GTTAAAGAAGTCTGAGGACAGGTGAATGCTGAGGGAGGGGAATCAGTCTGCATTGTGTGAGAAGGATGATCACCGAAGCAGATGAGGATGGACGGGCATTGGGATTCTGAATCAGAAAAACCTTGGCTTGAGAACTGGTGCCACTACTTCCTGTATCTTGGGCAAAACAACTCGGTTCACAAAGCCACTTCTCACTGCTGGCCAGGAGTAAATAGCGACCCCTTTGCTGCCCTCTTAATGCATGCCAGACACCGCTAAACGTTTCACGTGCCCTTGCTCGGATGCAATTTTTTAGAAGACAAATTTCATTGTTGCTGTGATAGAGGAGAATGGGAGCATTACTGGTGATAGTGCGAAAGCGCAACGCACGGCGTCTAATTAGATGCGGAAAGTCAGACTCGGAGGGTTTAGTACTTCCAGCAACGAGAATGGCTAACCTTCAGGAAGGACTGGGGATTTAGCAATCAGAGAAAAGCTGGACAACCTAGCGCAGCCGCTGTGATTGTTCACAAGTGTTTGGTTTGGGGGCGCCAGGTGGGGCTTTATGGATTGAGAGATCCTTCAGCTGTTGTTGATACTGCCTCCAAGCTAAGACTCCTCGTCCCAGCCTTGACTCTGTATTTACAAAGACAAGAGGTCAGTCGACGCCCCGAGAATCCAGGTGCCTCACTGCTCCGAGAAGGCGGAGCCCACCGCAGGGCGGGGGGAAGATGGAATTCTCCCTCCAAGGCCAAGGACGCCGAAGCTCTACTCTGCCTCTGTGGTTGGGGGAGGCGCCGGGCCTTCCTCCTCGGCCCCGCCTCTCAAGGCTGGCGCAT TCONS_00120019 TCONS_00120020 TCONS_00120021 TCONS_00120018 . 3' 31871 TCONS_00120019 TCONS_00120020 TCONS_00120021 TCONS_00120018 . 3' 32688 EMBV3_19569 TTGCAAACTATGGGAACACTGAGGCAGCAGATGGGAAGGAGCACATCTACACAACAACGG Gene BVT0102_280542 + 0 NULL GK000011.2:35029649-35379125 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024656 1 XLOC_014551 NonCoding TCONS_00024656 XLOC_014551 NonCoding NonCoding - 11:35124006-35194452 - TSS18039 593 1 TCONS_00024656_1 33 3 0.991624671729718 4.6565736587019e-05 6.7780427546081e-05 7.87402561070728e-05 2.86145516732435e-05 8.32576377708189e-06 0 0 0 0.000477893899385361 2.28942463943685e-05 0 0 0 1.58650630958337e-05 0 0 0 0 1.25491044595485e-05 0.000101785412722274 0 0 0 0 0.00103331089975506 0.000111346522216483 0.000363840256883124 0 0 0 0 noncoding 0 0 0 0 0.0691493881672389 0.640765189630477 -0.00982103170583405 0.84687745702284 AGACAGAAAGTGGATAGAGGAGGAAGTTTCAGAATTAACTGCTCAGGCGAAGACCAGAAGCAAAAAGCAGCTTGGAATTTGCAAACTATGGGAACACTGAGGCAGCAGATGGGAAGGAGCACATCTACACAACAACGGGCAGCAAGGTAGAAAATTCACAGCTGGGAATTAAGTCTTTTGGCTTTCTCTCCAGGACTGTTCAAGTGAGGTCCTTTAGCTAGATACACTATCTTCTTTAGATGGCAGCTGTCATCCTAGAAGACAATGGAAACCTCAAGATTTGAATATCCAAGAATCAGAAATCCTAGAATGTTATTTTTGTCACATTTTTTGATCAAAGAAAGTCCAAAAGCCAGCCAGATCTAAGGGGAGTGAAAAACAGAAGAGATAGCAGCAAAGTCACACTGCAAAAAGGACAGGAATTGCTGTAATAACTTTTGGAAATAATCTGTTGTCACAACCTTATGTCCTGGTTTGAGAGGCCTGGGTTGTTCCTGTTGTTTTGATATAATTATTATACAGCATCCTTACTCTCCAAAATATACCTATTTAGATGGTCATCTTGTATCTGAGATATATTTCTATAAACATGC TCONS_00027492 r 5' 94359 TCONS_00027492 r 5' 94359 EMBV3_27185 GTCCGGATTGAGGAGGACGTTGTGGTGACTGACACTGGCATGGAGCTGCTGACCTGCGTG Gene GeneID:615158|PEPD:NM_001080318:739_cdna Constitutive 1 NULL GeneID:615158 18 GENE PEPD NULL peptidase D EMBV3_16315 ATAATCACTGCAGAATCAATCTTCTACAAGGACCAGAGGAGGATCTTCCAAGGAAGATGG Variant GeneID:784921|GATAD1:NM_001081623:19_cdna 587^770 1 EMBV3_35396 GeneID:784921 4 GENE GATAD1 MGC149035 GATA zinc finger domain containing 1 EMBV3_33561 AATACATCCAGAACCTCTTCATCATTGAGTCCATTCACCGAGAGCCAGGGAAGCTCTCCG Gene GeneID:525643|OTOP1:XM_002688428:43_cdna Constitutive 0 NULL GeneID:525643 6 GENE OTOP1 NULL otopetrin 1 EMBV3_12732 GTTTTCACAGCCTTCATGAGAGTCACTGCAACTCTGTTCTTCGGAGCTTTTCCTCGTGGC Gene GeneID:784913|FHDC1:XM_002694321:56_cdna Constitutive 0 NULL GeneID:784913 17 GENE FHDC1 NULL FH2 domain containing 1 EMBV3_20933 TAGCCCTGCTCATGACCTTCTTTGCAGGAATTTTCTACATGTGTGCCTACCGGATGCATG Gene GeneID:281282|LIM2:NM_174102:35_cdna Constitutive 0 NULL GeneID:281282 18 GENE LIM2 NULL lens intrinsic membrane protein 2, 19kDa EMBV3_06976 AATTGGGCAGACTCCTGGGCATATTTGAGCAGAACCAAGACCGAAAGCACAGAACATACG Gene GeneID:614183|NUDT4:NM_001081618:46_cdna UTR3_Alt 2 NULL GeneID:614183 5 GENE NUDT4 MGC155166 nudix (nucleoside diphosphate linked moiety X)-type motif 4 EMBV3_06341 TAACAGCAACAGCGAGAAATAAATCAGAGAGCAAGGCACTGGGGGTGAGTCCTGTCCGAC Gene GeneID:614584|WT1:XM_002693516:255_cdna UTR3_Alt 2 NULL GeneID:614584 15 GENE WT1 NULL Wilms tumor 1 EMBV3_35544 GGAAGACTCATCCTCAGGTGAATATGAAGGACTGAACCAGGGGCTTGTATTGCTTAGCAG Gene BVT0101_030936 + 0 NULL GK000020.2:8022153-8038616 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115766 1 XLOC_069935 NonCoding TCONS_00115766 XLOC_069935 NonCoding NonCoding - 20:8024528-8026285 - TSS86234 1757 2 TCONS_00115766_1 42 0.361980648833238 1 0 3.09749425237606e-05 0 0 1.41789705841296e-05 0.000202321091230897 0 0.000122807692640266 0 0 0 0 0 0 0 0 0 0 0 0.000244881907012846 0 5.18337294043584e-06 0 0 0 0.000110413882380821 2.80695714172724e-05 6.00254774015514e-05 0 0 0 XR_227852.1 LOC101906823 PREDICTED: Bos taurus uncharacterized LOC101906823 (LOC101906823), 2e-38 165 74.72 0.144564598747866 0 noncoding 0 0 0 0 -0.0369191865715726 0.718806850470452 0.011159024588809 0.831613665819622 ATAAAACATTCTGGTGATGAAAGCTTATCTCTGATGAGTTGGAAAAGCAAAGAAAAATAATCCAAAGCTATTCCCTAGTTTAGAAAGATTTTGTTTATCCTGCTCTGTTAGAGTTGGAGCCAACCATTCTGATGGTTTGGATTAGCTGTTAATATTTCCAGCCATTTGAGTATTCCATCAACAGTGCATTTCTGGGAACAGACGACATCACCACGGATGGCAGGCTGTGGCACGACACTTCTCCACACTTAAGTCACAAGTCGTCTTCTCCTTTCACCACCTTGATCAGTGGCCTTTAGTGGAAACTGGGCAAAGCCAAGTTAGTGACCCCGGGGTATCAACACGGCCACACCTGCGTGGTGGCCATCGGACCTCCTCCATCCCCAGGGTTTCCGTGCGCTAAGCTGCCCACCAAGAATCCAGGCTTGCGGCCATTTGATCCTCCCTGTTGTGCATCTTAATCACTTATTTTTTTTTTTAATTATGGAAGGTAAGGCAGTGAAACAGTGATGGAGAGGGGCAGTCCGTGTGGATAAGAGGCTCATACAGTTCTCGAGATTTGAGAGAGATGAGTCCTTTTATCAGGAAACCTATTTTAGACTTGAATAGAATTCATGTGTTCACTTATTCATTCACTTTACAAATCCATTATCTCTTCAAATGACTATATGTATGTTTCATACTATAGTGGAAATAACTGGAGTTTTAGAATCATTCTGACCTGGATTCAGCTCCTGATTTGAACAACGTTTTTTCTGAGCCTGTTCCATCATCACCTGTAAATTTAGAATAATCACATCATCTTTGAGGGTTTTTCTAAAGATTTCCAAAAATGTGTGTAACATTACTGGCACATAGTAAACAATCAATCAGAGCTATAGCTAGTACTATTTTATTATTATCAACTACTTCTGCTAAGCAATACAAGCCCCTGGTTCAGTCCTTCATATTCACCTGAGGATGAGTCTTCCTCTTAGCCAGCTGCTTCAGCCTGACAGAAATTCAGACTCCCACTGGGTTTTGTTAACTTAGCTCAGCCTGGCCATGCTCAGCGTCTAACAGACTTCTTTCCTGACAAACCCTAATCAGCTCCTCCTGTAACTGAGCGCGAGCTCACTTCCCGATGCATGTAGAAGCCGTGGCATTCGCTTTTGAGAAAAGGTTTTATTTCAAGGTCAGTTGACAAGGAGGCAAGGAACCCAGCTCAAATCTGTGCCTCTGAGCCAGTGTTCAGGCAAAATGTAAGGGTTAGGGGAATTTCAAACTTGGAAAGCTGATTGGTTAGTCTGACATCTGTCCTTATATGCTACCGGTGCTTCTGGAAGCCAGATTTTCTCTATTGGAGGACTTCTCACTTTGTAAAGGGCTCTGGTAGAAGCATTTCTATTCTTTGAGTTCCATAGTCTGAAGATTCTTGGTTCTGGGTTCATCCTGGAGACCTGGGTTCTCATCCAGCACGTATGTAGTGCTGTCTCAAAAATAACTTAAGGTTTGATGAATCAATCAACCTATTTCAGGAGCAAAGTCAGTTTAAGCTGGTCAGTATTTTACCCGCTGATTTACTCTCAGCCCTCTTCTTGACTTGACCCTGGCCTGTGCCCTTGACCTTGGGCCCAGTCTTGGCACAGTTCCTCCTAAGCCAGTTTAGTGAGAATCTCCCACTCTTGATAGGTAATCGCCTTGGCCTTCTTTAGCAAGAATCCAGTTTATCAAGAGTCTCTCTACCCTTGATCAAATTCCTCCTAGTAACTTTTCAC TCONS_00114364 TCONS_00114365 TCONS_00114366 TCONS_00114367 . 3' 11679 TCONS_00114364 TCONS_00114365 TCONS_00114366 TCONS_00114367 . 3' 13435 EMBV3_33674 TGATCAAGTACACCCCGCTGACCTACAACAAGAAGTACAAATACCCGTGGTGGGGCGATG Gene GeneID:523784|SLC6A13:NM_001099027:31_cdna Constitutive 0 NULL GeneID:523784 5 GENE SLC6A13 GAT-2 MGC157343 solute carrier family 6 (neurotransmitter transporter, GABA), member 13 EMBV3_30726 AGCAGATGCTCAACGTGCAGAATAAGAACAGCAGCTACTTCGTGGAATGGATCCCCAACA Gene GeneID:533307|TUBB:XM_002698780:126_cdna Constitutive 0 NULL GeneID:533307 28 GENE TUBB NULL tubulin, beta EMBV3_16106 GATCTCAAAGTTTAGGCCCTGAATCAGCAGCACAGGCATCACATGGGAACTTAGAAATGC Gene BVV0102_059107 + 0 NULL GK000030.2:49232700-49737022 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43748 GCTGGCACATGGATTCTTGCACCAATGTAAAAGTTTATCTGAATATATACCAAGAAGCAG Gene BVV0102_107023 - 1 EMBV3_22229 GK000007.2:24436630-24487318 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26033 GCTGGAGCAAAAACTGAGGGAGGCTGGTCATTCCTCTTAAGCAAATACGTCTCTCTAGGC Gene GeneID:521633|LNPEP:XM_002689410:46_cdna Constitutive 0 NULL GeneID:521633 7 GENE LNPEP NULL leucyl/cystinyl aminopeptidase EMBV3_02880 TGATCGAGAACATCATCAAATCGGGCTCGGACGAGGTGCAGGTTAAACAGGAGCGCAAGT Gene GeneID:280677|C3:NM_001040469:6_cdna Constitutive 0 NULL GeneID:280677 7 GENE C3 NULL complement component 3 EMBV3_14108 CATGCATCTGATAGATTTCCCAGGTTTGCAAACAGGTTCATAATCTGGCCTTGCACAACC Gene GeneID:530941|EPB41L5:NM_001035384:20_cdna UTR3_Alt 2 NULL GeneID:530941 2 GENE EPB41L5 MGC128986 erythrocyte membrane protein band 4.1 like 5 EMBV3_15248 CTGGAGTTCAGCCATGCCCAGTACAAGGAGCTGCGTGTCATCTCGGAATACCAGAAGCTC Variant GeneID:540602|NANS:NM_001046482:38_cdna 372^668 3 EMBV3_30887 GeneID:540602 8 GENE NANS MGC137759 N-acetylneuraminic acid synthase EMBV3_15339 TCCCAGTTTGTGGCATTTGCTGTTGAGTTTCTGTTCTCACTGGGAAGTCCATACCCCAGC Gene GeneID:504652|TK1:NM_001097572:344_cdna Constitutive 0 NULL GeneID:504652 19 GENE TK1 MGC148510 thymidine kinase 1, soluble EMBV3_28791 GAAGCCACCACAATGAGAAGTCTATGCACCATAACTAAAGAGTAGCCCCGGCTCTCTGCA Gene BVV0102_424189 + 0 NULL GK000002.2:106733812-106877084 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14827 CTCCTTGCACTTCACGTCCTTGAGGCTGTGCTGCCTGCTTGTGAATCTGGTGTAGAAGAT Gene BVT0102_038155 + 0 NULL GK000010.2:46311619-46461583 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013781 TCONS_00013782 TCONS_00013783 TCONS_00013786 TCONS_00013791 TCONS_00013801 TCONS_00013795 TCONS_00013780 TCONS_00013794 TCONS_00013792 TCONS_00013785 TCONS_00013790 TCONS_00013798 TCONS_00013793 TCONS_00013799 TCONS_00013800 TCONS_00013787 1 XLOC_008198 Coding TCONS_00013793 XLOC_008198 Coding Coding HERC1 10:46241809-46400253 j TSS10150 8421 1 TCONS_00013793_11 2729 41 0.947110317274982 0.00253361100772916 0.00246290707262712 0.00240892117354589 0.00166690731595666 0.0011251915172988 0.00105577445012769 0.00138432242443729 0.0015549289702275 0.00128855752690887 0.000385229665649998 2.65448657284493e-05 6.2737771621638e-06 8.63015582081482e-05 4.14072004806866e-05 0.000353752192842452 0.00888803062654958 0.00312005877871629 0.0029663260247066 0.00266257617073066 0.00188059934411415 0.000854460628958387 0.00224130637835531 0.00192686737766134 0.00211254777166239 0.00314586809305933 0.00327372720183049 0.0017279797572188 0.000362732754595719 0.000241209134548882 0.00040942641339012 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 3023 99.88 0.199501246882793 XR_243129.1 HERC1 PREDICTED: Homo sapiens HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 (HERC1), transcript variant X9, 0.0 1.267e+04 93.46 0.990618691366821 TCONS_00013793_11 sp|Q15751|HERC1_HUMAN HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; 0.0 5216 97.52 0.998900696225724 0 coding 0 0 0 0 -0.113312439975533 0.421698505014824 -0.041826668853468 0.501442662758744 GGGCGAGGGCTCCAAACTGCGCGAGAGTTCCGCCCAAGTGCCGCGAGACTCGCCTGCCGCCGCTGCCGCCGCCTCTTACGTCTTTCCCTTTGACAAGTCGCCGCTGCTGCAGCAAAAATAAAGGACGCGGCCACCGCAGCCGCTGCCGCGGGTCGCCGGAGCCCTGTCCCACCCCCGTCAGCTCTGGAGCCGCGTATGAACTAATGGCTGAAGAGTAAATCAGTATGGCAACTATGGTTCCACCAGTGAAACTGAAATGGCTTGAACACCTCAACAGCTCCTGGATTACAGAGGACAGTGAATCTATTGCTACAAGAGAGGGGGTTGCTGTTTTATATTCTAAACTGGTCAGCAATAAGGAAGTAGTACCTTTGCCTCAACAAGTTTTGTGCCTCAAAGGACCACAGCTGCCAGACTTTGAACGTGAGTCTCTTTCAAGCGATGAACAGGACCACTATTTGGATGCCCTTCTTAGCAGTCAGCTAGCACTTGCAAAGATGGTATGTTCAGATTCCCCATTTGCTGGGGCACTTCGAAAACGATTGCTTGTACTCCAGCGTGTCTTCTATGCACTTTCTAATAAATACCACGACAAAGGCAAAGTGAAACAGCAGCAGCATTCTCCGGAGAGCAGCTCTGGTTCAGCAGATGTCCATTCTGTTAGTGAACGTCCTCGGTCAAGCACTGATGCACTTATAGAAATGGGTGTTCGAACTGGTCTAAGTTTATTATTTGCACTTCTGAGACAAAGTTGGATGATGCCTGTGTCGGGACCTGGTCTCAGTCTTTGCAATGATGTTATTCATACTGCAATTGAAGTTGTGAGCTCTTTGCCACCATTATCTTTAGCAAATGAAAGCAAGATTCCACCTATGGGCTTGGATTGCTTATCACAAGTAACAACCTTTCTTAAAGGAGTAACTATTCCCAATTCTGGAGCAGACACTTTAGGTCGTAGATTAGCTTCTGAGTTGCTGCTTGGTTTAGCAGCTCAGCGAGGTTCTTTGCGGTATCTCCTTGAATGGATAGAAATGGCACTGGGGGCTTCAGCAGTTGTAAATTCCATGGAGAAAAGCAAACTACTGTCAAGCCAAGAAGGAATGATCAGCTTTGACTGCTTTATGACTATATTAATGCAGATGAGGCGTTCTTTGGGTTCATCTGCTGATCGGAGTCAGTGGAGGGAACCAACCAGAACATCTGATGGCTTGTGCTCACTCTATGAGGCAGCTTTGTGTCTCTTTGAAGAGGTTTGCAGAATGGCTTCTGATTACTCAAGAACATGTGCTAGCCCTGATAGCATTCAGACTGGTGATACTCCCATTGTTTCAGAAACCTGTGAGGTTTATGTTTGGGGGAGCAATAGCAGCCATCAGTTGGTAGAAGGCACACAGGAGAAAATACTACAACCCAAACTGGCTCCTAGTTTCTCTGATGCTCAGACTATTGAAGCTGGACAGTACTGCACTTTTGTCATTTCTACAGATGGCTCTGTCAGAGCTTGTGGTAAAGGCAGCTATGGAAGACTAGGCCTTGGCGACTCTAATAATCAATCTACTTTAAAAAAGTTAACATTTGAACCTCACAGGTCCATTAAAAAGGTCTCATCTTCTAAAGGATCTGATGGTCATACTTTAGCTTTCACTACAGAAGGAGAAGTCTTCAGCTGGGGAGATGGTGATTATGGGAAACTGGGACATGGAAATAGTTCAACACAGAAATATCCCAAGCTTATTCAGGGCCCTCTGCAGGGAAAGGTAGTTGTCTGTGTGTCAGCTGGATACAGACATAGTGCTGCTGTCACAGAGGATGGTGAATTATACACATGGGGTGAAGGAGATTTTGGAAGATTAGGTCATGGTGACAGTAATAGTCGTAACATCCCAACATTAGTAAAAGACATTAGCAATGTAGGAGAAGTTTCTTGTGGCAGTTCACATACTATTGCTTTATCTAAAGATGGGAGAACTGTATGGTCTTTTGGAGGAGGAGACAATGGCAAACTTGGCCATGGTGATACCAACAGAGTGTATAAACCTAAAGTTATTGAAGCTTTACAAGGAATGTTCATTCGTAAAGTTTGTGCTGGAAGTCAGTCTTCACTTGCTTTGACATCAACAGGGCAGGTCTATGCTTGGGGCTGTGGAGCTTGTCTAGGTTGTGGTTCATCAGAAGCTACTGCACTGAGACCAAAGCTTATTGAAGAACTGGCTGCCACAAGAATAGTTGATATTTCTATTGGAGACAGTCATTGTTTGGCTCTTTCTCATGATAATGAAGTTTATGCCTGGGGAAATAACTCAATGGGGCAGTGTGGACAAGGAAACTCCACAGGTCCTATTACTAAACCAAAGAAAGTAAGTGGCTTAGATGGCATAGCTATTCAACAGATCTCTGCTGGAACATCACATAGTCTAGCATGGACTGCTCTTCCTAGGGACAGACAAGTTGTTGCCTGGCACCGACCTTATTGTGTAGATCTTGAAGAGAGTACCTTCTCACACCTTCGTTCATTTCTTGAGAGATACTGTGATAAAATAAACAGTGAGATTCCCCCACTCCCTTTCCCTTCATCAAGGGAACACCACAATTTCCTCAAACTGTGCCTGAAGCTGCTTTCAAATCACCTTGCTCTTGCACTTGCGGGAGGGGTAGCTACTAGCATCCTTGGGAGACAGGCAGGTCCGCTTCGAAATTTGCTCTTCAGACTGATGGACTCAACTGTCCCAGATGAAATCCAAGAGGTTGTAATTGAAACTCTGTCAGTGGGAGCAACCATGCTGTTACCTCCTTTACGAGAACGTATGGAATTACTTCATTCTCTTTTACCCCAAGGACCTGATAGATGGGAAAGCTTATCTAAAGGACAGAGAATGCAACTGGATATTATTCTGACAAGTTTGCAAGATCATACCCATGTAGCCTCCTTACTTGGGTATAGCTCACCCTCTGATGCTGCTGACCTCTCTTCCGTATGTACTGGCTATGGAAACCTGTCAGATCAACCTTATGGCACTCAGAGCTGCCATCCAGACACTCATCTGGCTGAAATTTTGATGAAGACTCTCTTAAGAAATTTAGGATTTTATACAGATCAAGCATTTGGGGAGCTAGAAAAGAACAGTGATAAATTTCTACTTGGAACATCGTCTTCAGAGAACAGTCAGCCCGCTCATCTTCATGAACTGCTATGTTCACTGCAGAAACAGCTGCTGGCATTTTGCCATATCAATAACATAAGTGAAAACTCAAGCAGTGTGGCATTGCTTCATAAACATCTTCAGCTCTTGTTGCCTCATGCCACGGATATTTATTCACGTTCTGCAAATTTGCTGAAAGAAAGTCCTTGGAATGGCAGTGTTGGAGAAAAATTAAGAGATGTGATATACGTCTCAGCTGCAGGCAGTATGCTCTGCCAGATTGTTAACTCCCTCCTGTTACTCCCAGTGTCGGTGGCTCGGCCTTTGTTGAGTTACCTCCTCGACTTGTTGCCACCTCTTGATTGCCTTAATAGACTCCTGCCAGCTGCTGCTCTTTTGGAAGACCAAGAGTTACAGTGGCCTCTTCATGGAGGGCCAGAACTGATCGACCCTGCTGGCATGCCACTACCTCAGCCAGCCCAGTCCTGGGTGTGGCTTGTGGATCTGGAAAGAACAATTGCTCTTCTTATTGGGCGATGTCTTGGTGGCATGCTTCAGGGTTCGCCTGTGTCTCCAGAGGAACAGGACACTGCATATTGGATGAAAACACCACTTTTTAGTGATGGTGTAGAAATGGACACCCCTCAGTTAGATAAATGTATGAGTTGCCTATTAGAAGTAGCTCTTTCGGGAAATGAGGAACAGAAGCCTTTTGATTATAAATTGCGGCCTGAAATTGCTGTCTTTGTAGACTTGGCCTTGGGTTGTTCAAAAGAGCCTGCTCGAAGCCTTTGGATCAGCATGCAGGATTATGCTATTAGTAAAGATTGGGACAGTGCAACTTTGAGTAATGAGTCACTCTTGGACACTGTGTCTAGATTTGTTCTTGCAGCTCTTCTGAAACACACAAATTTACTCAGTCAAGCATGTGGAGAAAGCCGATATCAACCTGGTAAAAGCTTATCAGAAGTATACCGTTGTGTGTACAAAGTTCGAAGTCGTTTACTTGCTTGCAAGAACCTTGAACTTATTCAGACCAGGTCATCGTCAAGAGACAGATGGATCTCGGAAAACCAAGACTCCGCAGATGTTGATCCTCAGGAGCATTCATTTACCCGGACCATTGATGAAGAAGCTGAAATGGAAGAACAGGCTGAGCGAGATCGGGAAGAAGGACATCCAGAGCCAGAGGATGAGGAGGAAGAACGAGAACACGAAGTGATGACAGCTGGCAAAATCTTTCAGTGTTTCCTCTCAGCCCGTGAAGTAGCTCGTAGCCGAGATCGAGATAGAATGAACAGTGGGGCAGGGTCTGGGGCTCGAGCTGATGATCCACCTCCTCAGGCTCAGCAAGAGCGAAGGGTGAGCACAGACCTTCCTGAGGGTCAGGATGTGTACACTGCTGCCTGCAACTCCGTGATCCATCGATGTGCCCTGTTAATATTAGGAGTAAGTCCTGTGATTGAGGAGCTTCAGAAGCGAAGGGAAGAAGGACAGTTGCAGCAGCCTTCCACAAGTACCTCTGAAGGGGGTGGACTTATGACCAGGAGTGAAAGTCTTACTGCAGAGAGCCGGCTAGTCCACGCAAGTCCAAATTATAGACTGATCAAATCGAGGAGTGAATCTGATTTGTCTCAGCCTGAATCAGATGAAGAGGGTTACGCACTGAGTGGAAGACGAAATGTTGATTTGGATTTGGCATCATCTCATAGAAAGAGAGGTCCTATGCACAGTCAATTGGAATCTCTGAGTGACTCGTGGACTCGCCTGAAACATAACAGAGACTGGTTGTGCAGTTCCTCTTATTCCTTTGAGTCTGATTTTGATCTTACCAAGTCTTTGGGAGTTCACACTTTGATTGAAAATGTTGTAAGCTTTGTGAGTGGAGATGTGGGGAATGCCCCAGGTTTTAAAGAGCCAGAGGAAAGTATGTCTACAAGTCCCCAGGCCTCCATCATTGCAATGGAGCAGCAACAGTTAAGGGCAGAACTCCGTTTAGAGGCACTTCATCAGATACTTGTTCTGTTGTCTGGAATGGAAGAAAAAGGTAGCATCTCTCTGACAGGAAGCAGATTGAGCTCAGGTTTCCAGTCATCCACTCTGCTCACATCTGTGAGGCTGCAGTTTCTAGCAGGGTGTTTCGGTTTAGGCACTGTTGGACATGCAGGAGCCAAAGGAGAGAGTGGCCGATTGCATCACTATCAGGATGGGATCAGAGCAGCTAAGAGAAATATTCAGATTGAAATCCAGGTGGCTGTGCATAAGATTTATCAACAGTTGTCTGCTACCTTGGAGAGAGCCCTGCAAGCCAACAAGCACCACATTGAAGCCCAACAGCGTCTCCTTTTGGTTACAGTTTTTGCCCTGAGTGTTCACTATCAGCCAGTAGATGTTTCTTTGGCGATTTCCACTGGTCTGCTAAATGTATTGTCACAGTTATGTGGCACAGACACCATGCTAGGACAGCCTCTTCAGTTGTTGCCAAAAACAGGTGTTTCCCAGCTTAGCACAGCTTTAAAAGTGGCTAGTACAAGGCTGCTCCAGATTCTAGCCATCACTACAGGGACCTATGCTGATAAACTGAGCCCCAAGGTAGTTCAATCTTTGTTGGATCTACTTTGTAGTCAGTTGAAGAATTTGTTGTCCCAGGCTGGTGTATTGCTTATGGCCTCTTTTGGAGAAGGAGAAGAGGATGAAGAAGGAAAAAAAATTGACTCTAGTGGAGAAACTGAGAAGAGAGATTTCAGAGCTGCTCTTAGGAAACAGCACGCAGCTGAACTGCATCTGGGGGATTTCCTAGTTTTTCTTCGCAGAGTTGTATCTTCAAAAGCAATTCAATCAAAAATGGCTTCCCCAAAGTGGACAGAAGTGCTTTTAAATATAGCATCTCAGAAATGTTCTTCAGGAATTCCTCTAGTTGGTAACTTAAGAACGAGGCTCCTTGCACTTCACGTCCTTGAGGCTGTGCTGCCAGCTTGTGAATCTGGTGTAGAAGATGATCAGATGGCCCAGGTTGTGGAACGCCTGTTTTCCCTCCTGTCAGATTGTATGTGGGAGACACCCATTGCTCAGGCCAAACATGCTATTCAGATAAAGGAAAAAGAACAAGAAATAAAATTACAGAAGCAGGGAGAGTTGGAGGAAGAAGATGAGAATCTTCCTATACAAGAAGTATCCTTTGACCCAGAGAAAGCTCAGTGTTGCATAGTGGAAAATGGACAGATTTTAACTCATGGCAGTGGAGGAAAAGGATATGGACTGGCGTCAACTGGAGTAACTTCTGGGTGCTATCAGTGGAAGTTTTACATTGTGAAGGAAAACAGAGGTAATGAAGGCACGTGTGTTGGAGTTTCTCGTTGGCCAGTACACGACTTTAACCACCGTACTACCTCGGATATGTGGCTCTATCGGGCCTACAGTGGTAACCTCTATCACAACGGAGAACAGACTCTGACGTTATCCAGCTTTACTCAAGGAGATTTCATTACCTGTGTGTTAGACATGGAAGCCAGGACCATTTCCTTTGGGAAGAATGGAGAGGAACCCAAATTAGCTTTTGAAGATGTGGATGCAGCAGAGTTGTACCCATGCGTAATGTTCTATAGTAGCAACCCAGGGGAAAAGGTGAAAATTTGTGATATGCAGATGCGTGGCACACCACGAGACCTCCTTCCAGGAGATCCTATTTGTAGTCCAGTAGCTGCAGTGCTGGCAGAGGCCACTATTCAGCTTATTCGTATCCTTCATCGAACAGACCGTTGGACTTACTGCATTAACAAAAAAATGATGGAAAGGCTACACAAAATTAAGATATGTATTAAAGAATCAGGTCAGAAGCTAAAGAAAAGCCGCTCGGTTCAAAGCCGAGAGGAAAATGAAATGAGAGAAGAAAAGGAAAACAAAGAGGAAGAGAAAGGTAAACACAGTAGGCATGGCCTTGCTGACCTGTCAGAACCGCAGCTGAGGACCCTTTGCCTAGAGGTGTGGCCTGTGCTGGCAGTGATAGGAGGAGTTGATGCTGGTCTTAGAGTTGGAGGTCGGTGTGTTCACAAGCAAACTGGGCGCCATGCCACGCTGCTGGGAGTGGTCAAAGAGGGCAGCACGTCTGCCAAAGTCCAATGGGATGAAGCAGAAATTACCATCAGTGATACTCCATTGTATAATCTGGAACCCTGTGAACCACTTCCTTTTGACGTGGCACGATTTCGAGGCCTGACAGCTTCTGTGTTGCTGGACCTCACATATCTGACTGGCATTCATGAAGACATGGGCAAACAGAGCACGAAGCGACATGAAAAGAAACACCGACATGAATCTGAGGAGAAAGGGGATGTTGAACAGAAAATTGAGAGTGAATCTGCTTTGGACACACGAACGGGCTTAACATCTGATGATGTTAAGGGTACCACAAGCTCCAAATCAGAAAACGAAATAGCTTCATTTTCTTTAGATTCAGCAGTGCCAGGTGTGGAATCCCAACATCAGATAACAGAAGGAAAAAGAAAAAATCATGAACACATGTCCAAAAACCATGACATAGCCCAGTCAGAAATCAGAGCAGTCCAGCTGTCCTATCTCTACCTCGGTGCTATGAAGTCACTCAGTGCTCTTCTTGGCTGTAGTAAATATGCTGAACTGTTGCTGATACCAAAAGTTCTGGCTGAAAATGGCCACAACTCAGACTGTGCAAGCTCTCCAGTTGTTCATGAAGACGTGGAGATGCGTGCAGCCCTTCAGTTTTTGATGCGCCACATGGTGAAGCGAGCGGTCATGCGGTCACCCATAAAGAGAGCACTGGGATTAGCAGATCTGGAACGAGCTCAAGCCATGATCTATAAATTAGTGGTCCATGGGCTTTTGGAAGACCAATTTGGGGGCAAAATTAAGCAAGAGATTGATCAACAAGCTGAGGAAAGTGACCAAGCCCAACAGGCACAGACCCCAGTTACCACCAGCCCATCAGCCTCAAGTACAACTTCCTTTATGAGCAGCTCACTGGAGGACACCACAACTGCCACGACTCCAGTCACTGACACAGAAACGGTGCCTGCGTCTGAGTCCCCAGGGGTGATGCCCCTTAGTCTTCTCAGGCAAATGTTCTCTAGTTACCCAACTACCACTGTGCTTCCCACGCGTCGTGCACAGACTCCTCCAATATCATCGTTACCAACCTCTCCTTCTGATGAAGTAGGAAGAAGGCAGAGCTTAACTTCTCCTGATTCCCAGTCAGCAAGGCCAACCAACCGCACAGGCCTTGTCAGACCCAAGCAGTAGACTTTCA EMBV3_15352 TTAGGGTACTGGAAAAGAGGTTCCACAGGCAGCTTCCACCTTAACCCAAAGCGAGTTAGG Gene BVT0102_043379 + 0 NULL GK000003.2:90873548-91388036 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170624 TCONS_00174008 TCONS_00174009 TCONS_00174006 2 XLOC_103617 XLOC_104495 NonCoding TCONS_00174006 XLOC_104495 NonCoding NonCoding - 3:90959732-91000523 - TSS129224 15163 1 TCONS_00174006_22 147 0.373672756050913 5 0.628389311105663 0.00113925910588557 0.00217895127026737 0.000750485286187768 0.00056610301838211 0.00119097182968081 2.10016544094464e-29 0.000328267350518425 0.00158202911796532 0.000868622426503321 1.15480431661132e-09 1.94901479573768e-05 1.02468997462316e-09 0.000360190300517547 0.000153651442566931 5.3961195098016e-09 2.23980153686788e-12 0 0 0.00124408265174268 0.0019844996749717 0.000717986545558415 6.76660087699304e-10 2.54213449992029e-09 0 0.000543932304597931 0.00172405060228771 0.000518190567073162 2.37542256936556e-05 1.40396996528283e-09 9.77721408367391e-08 XM_005217529.1 IL15 PREDICTED: Bos taurus interleukin 15 (IL15), transcript variant X1, 1e-166 594 81.02 0.042735606410341 0 noncoding NNAGAACTCCTTCATTGCATTGAGAAGATGCAGGAAATGACTCATGGCCCTTGGTGGGGCAGGTGCCAGCCCCTAATGAAAGAAATTGCCTCCAAGGAGGCAGGAACTTCTTGATAAGAGCTGACTCCTGGAGAGCTATGTTGGAGGAATTTGGGGATGGTGGGGTGGTGAGAACTGCTGGGAATTACCCAGATAGAGAGCTGTGTGACTGGTGGAAAGTGACATGTCTAGCTTCTGATCAGGGTCACAGGCTGACTTGTGAGTGATTCCCTCTATTTTACCAGCTCTGGTGCATCTTAAACTTAGTCTGATTCACATCTTCCAAAGAGAAAGGCAATGGTCAGAATTCCAGCTAGTGAGTCTATCCAGGGTCTAACCTGCAGTCTGGGGCTTCCTCTTGACACCATCCAATAGTCTAAACCACTCCCATTTACAGTGGCCTTTATACCACTGAGAGGTAACCACCTCCCCCCAACACCCAGGCTAAGTGGTCTCTACAGGGACATATATAGTTTCTTCATGTACCTACAGATATTCTAGCTCTTCTGCCCCTAGTAGTTTCCAGATTCTAGTACACTCTCGTTGCTCCAAAAGCCAACTCCATCCTGGACAGTAAACATTCTCAACACTGAACTGAAAACCCACCTGGTTGTTTATGACAAATAGCCTGCCTCTATATCGATTTGTCTGCCTCTCTGAACCTCTAACAGCTGAGATTTCAAGCTATAGGCTCCAGTTCATGTCTGCTTTCTGTCCAGATCAGGTTAAGTCAACTTTGCAAGTCAAAGTCCAAAGGTCATTACTGTGTCTGCATGATCTTCAGTAACTATAATAGTGTGGGATATAGTCACATTTTTTGAAAGTGTGAATTCATTCTGAACTTTGACTCAGCAGATACCTACTGGATTTAGTTAGGTTTACAAACAAAAATCTACATATGATACATGTTATTGACTTAGCTTAAAAAAAAAAAAGCTGTTTAAGTGTGCCATCTTGTTATGCTTACTCCCTTTCCCAGGGAAGACACTATCCTGAAGTTAATCCTTCCCATCTACACGCTAACACTTTCTCCATGTTTGTATCTGTGACAAATGTATAGTATTACTTTTTGGTGCAAATGGTACACTGTAGAAATTTTACAGTTTGCTTTTTCTCCAAGTTCTGTTTTATATTTAATACTCTTGGGCTGGAGTGATCTTATTCTTCATGACTTATACTGTATCTGTAGTCCTTTAAGCTCCAATAAAGTTTTTTTCCCCCCCAATAAAAAGTAGTTTGCCTTTATTCTTGTCCCTTAGGTCCCCAAATAAAAGCAAATGCAGATGTGGTCTGGAGCATACCTTAAACAGACTGCAAACTATTTCCACAAATTAAGCTCTAAAAATGGTTAGAAAATAACACTGTAACAGGCAGCATGACAAACAAGCAAAAAAGCATATAAGACAGCATCATGCACAGAAAATCATTACTGAAATAAGGAACAAACTCCCAGAACAAACTTCAAGTGTACTAACAGGAGAGATACTATCAAGAGTCAGTCACATTTAACAACCAAGCAACTTCCCCCTAAAGTTGTACTAAGATGTCAATTTACAATTATACTGGTGTACAGTGCCTTAAAGGGTTGATTTTCAGTGGAGTATGTATATCACTAAGTCTTAAGAAATACATGGAGGGGTGTGTTATTAAAATAACTGGAGGATGCTATAGACATAGTCTAGAGCCAGCCATGTCTTGAGGGCACATGGCAGAAGTCCTGTAGAATAAGAAGTGTCCTGCATTCCACGTGACTAAGTTGTCTCCGGCCTTGAAGGGAAGAAAACCAGTTAACCAAGTCTAAAATCTCACTCCATCTGGCATAAAGAGTCCTGGGCATGGTCTTAACGCTTGTAGAATTTTCCGGGAACACAATCACTGTCAGTTGACGGTTGCACATTGTTATGTGGAAACTTACTCAGAATTAAGTTACTATTTCTGAAAGTCACCTCATTTATAGCTACCACACTGACTTCACCTATAGTGTATTTTTAGGGAGTGAACTTTGAGGCACTTATGAGTGATACTATTTCACACCCACAAGGTTAGCATAAAAGTCAAACAGAACCTAGTGGTGGTGAGGATGTGAGATGTGGGGAGTGTTTTCTTTCTTTTTTTTTTACACACACACAACTCCTAGTGCTTGTGGGAGTATAAACTGATCACAAGAGCTAATAATAATAAGTTTCTTCTAAAGGCAAGGCATGTGAGACCACAAATAGTCTGATTGGGGCAAATGAACCCAGGAGGGTATTGGGAACATAGGGGGTTCCCTTACAAGTTTAGCGCTTTTTAATCTACAGAAGGTTCTTTGAGATAAGCCATTCTCACCTCACCCCCAACCTGGGCTCTCAAGTGGTGCATTGCAAAATGTGCTCAGATCCAAATGTCCTGAGCAGACTCAGACTAAAATAATCTTCAAAGTTTATTACAAGCTAGTGAAGACAAAGTCTCAAGTTCTACCTTTGGTGACCACTAGTCGACAATTTTTGCCAGTCTTTCCCAAAGCTTTTTTTTTTTTTTTTAAAGGAGAAAAGTAGGGGTTTCCATCTCAGTTTGCTTTAGTGGTTGTTAATTCAGAGACAGTTAATTTACACAGAGAAAGGAATTCCCTGTAGAGATAATATTCATATAGATGAGCTCTAGTTAAGCTGAACACAAACACCAGAATGAGTTTATCACGGTTGCAAGTTGGAATTGAGGGACCCAATGGGACCAACGATACACTACTCTATAGAAGAGCTAGCTTTGCTTTTCCCTGGAAATGGTCTAGGACTGTATAGCTTCATGAAGCAGGTACCTTTCTTCCAAAGGCATAGCATTAGCTTGTTCTAGTTCCCACCTGCCTCTGGACAACCCCAACTGCAATATACTACCCAAGGAAGTCTGGAAGGACCCTAGAGGATTAGTATATGCAGGCAAAGACTAAAGCAAAGATCTAGGATAAAAGAGCTTAGAATATAAACATATCTGCTTCATGTGTGAGGAGACTGGGCTTTCACTGGGTGATAGTTTATATTCTAACACTCTACTCAGTTCAGTCACCCTTAGAGGGTAGCACTCCCTCCTATCGATGTGGGAACTGAAGAATTAATGTGACTTTGCCAAAGCCACATTACTACTAATTGTCAGAGCCATATTTCAGGTCGTTTTGATTTGAAAATAATGGAAATTCTAGTGGGAGGAAGTTTTTAAACAAAGTATGTTCCTTTTATTTTGGAATGGATCTTAAACGTGCCTTTAAAAGCATAGCAATACTCTGTCATCCTTGGACATTCCTCACTGAGACCCATTACTCAAGGTTCCTTTGTTGCCTGCTATTTTTACTCAAGGAAACATGGTTTGCACACAAGCCATCTTAGTTTTCTCCTAGTCGAGTCATACCCTGTGCTCACACTTGAATGGATTGTTTACCCCAACCGTCTTCCCCAATTTTCCTGACCATTTAAGCTCTTTGTAGGTCTAAGTTCCCCCCCGGCAGTAGTCAAAGATCTTAGCTCTGTACCTAGTACTGTACAGTATTGCTGATATACAAATAGATACTGAAATCATTAGTGGATAACTTGGCTTTATAGATGTTTTGAACAGCATTGTCATAAAAATGCTTGGTGAACTTATGTTTATGGTGTTTTAGTCACGTTTGAAGAGTTGGTTAGGGTTTTAAACAGGCTGGGAATATTTAATAGTTTTCCCATTTAAACTATTATGATTCCTGTTATCCTAGTGTTTCTATTATTTGATAAGAGATGAAGACATGCACTGTTTCTCAGGCACAATACTGAACATAGATGTCATATGCTTGTACCCATTTGTTGGAACCCCAGGAGATGACACTACAAACACAGACCTATACAAATGCACTGAAGTGGCCACAAAACCCCCAGTGGCATCATTAAGGTGGCTCATTTGAAGTGCACTTTCATTTCAAAGCTACCAAAAGTCAAACTTATTCCAAGATACTGCCTTCTTGGACAACAGTTCCAAGCTCGACAGTAAGCTTTTTCACCTGCGGTAGGTTTTGAACTCAGTTGGGCTGTTAATTACTGAGATCCAGAGATAGACTGGGCTCCAGAATGCTGCTAGTTGCCATATTGGTACAATGATTGTGACAACTAAAATAGTCCCCATAGTTTTCAAAGTGCCCTGAATAGAATATGGTGTTGTCCCTCTTGGAAGTCTCTGCATTATGCCATCCATCACTGTTGAGATCTTAATTCCACAGTCCCTGCTTTGAGACAGGAAAAATATGCCAAAGTCACAGGTGACAGCACTGTGCACAGCACATCAAATGCATTGATGATGTGAGTTGTCTCGATATTTAACAAATATCAAGTTTCAACAATGTAAAACCCCCACAGTGCACACCCACATACCCCATCACCTCAGCAGTTCCTAGGCCAAATGCATTGATGTTGCAAGTTGTCCCTATATTAAAGAGCATATTCCAATATCAAATGGTAAATTTCAACGATGCAAAACAATGTTTGCACACCCCTCCGTCACTTTTGCACAAACCCGATAGCTTTGAAGTTATGTTTTTTAAGTCCAAGCAACATAAAGAGGCCATTTCCTTACTATATTCAACCCACTCTATTCTGTGCAACCCAAGCTATCTGCTCCTTTCTAGGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACAGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAGTACATAAAAGTGAAAAGTAAAAGTGAAGTCGCTCAGTCATGTCCGACTCTTTGTGACCTCATGGACTGCAGCCCACCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCCCTTTCTAGGCTAGTGGAACCATATTAGGTAATATTAGCAAGACATAGATTATCTAGTAACTCATATGAACTCAAGTTCCCCTGAGTGATTTGTTTCTTAACTAGGCTTATAGATTCCTTCCCTAGAGCTCCAAGTTTTTTATGTAAACTGAGATATGTATATGCTTATTGCTCTAAGTATATTTTCTAGTTTGTTTCCTTCCTTTGTATTCCTAAGGCTCCAAATTTCCAAGAAGTACTTCCTTTGTTATGATTGGACAGTTTTTCCAAAACTTTTGATAGTCATTTGGAAACCTGAACATTTGCATGTCTCTCACTAAGTGTAAGATCAGATCATTGATCAAAACCAAATTAAACTTTTAAAAAGGTGAAAGGCATCTGTTTTATGTTATCTTTTATGACTTGCAATATTTGACTGGTATTTCTATTGCGGTATAAATATTTGAAGAGAAACGTCCACAGTCTTCTGCTTCCCAGAACTGTAAGAACACCAGCTGGGATCATTGCCAGTCCTGGGGTACAGTTTGTACGTGAATGATTAGTCTTTATTCAGTTTTACATGAACTGCACGTTAGATGATGTCTCATCTTATAAGGGCCTTATTAGGGGCCTTTCATTTCTGTCGAGTTTCAAGAATTCCGTATCCTGGATTTATCTTCTGAGCAAGTAGAGAACAGTAATACGATATTTTCCATCCTTTTCCATCATGCGCCAAAAAATAAGGTGCAAATGGAGTAAAACCTTTAAGGTTCTGTTGCATGTCATGTAACTTCTCCTGGCCCCAGAATTTGAACCATAACCAAAACCACACACAGCTCTTGTCATTCAAGTATGTCCAGTTTTTAAACCCTCAATGGACTACTGGTTGTTCCTAGCATTACCTATCATGCATCTTTATAAATGACCTCTTCCTAGTTTTGACTTGTTAATATTTGTCGAAAACTCACTTGCAGCCTCTAAGGGGCCTTCTCAAAAAAACTAAGACTCTTTAGTTAAAACTAATATTCACTCTTTGGTAAACCTTAAGTCATCATACCCTCTATGAATGTAAGTGATAGGCTTGACTTTTTCCTAACCACCTTAAATTACCTCTTCTCATGGAGACTTGTGCTTCAGAGTAAATGCAAATTCCTAAGACATTTCAGCCCATCTTTCCAAATAAGAACAGAATAAGCAGTACTAGTCAACATACTTTGCTGGATATAACCTTATGAATGTAACAAGTCAGAAAATTTTGACTTTCATTTGAAGGGCTTTCAGTGATCTAAAGTTTCCTGGGAAATTCCAAAGTAGTGGAGAGGAGCAGCAGGAATCAAGCATTTCTATACTCAATTATCTAGTACTCCCAGATCAGTTCTTATGACCCTGAAGGTGTGTCATGATGTTTCCACTAGAGCAATCTACAGATGGGCAGGCAGTTGGCTGCATCTTCAGCAACCCACCATGGCATCACCTGCTGCCCTCAGCCAGAGGCAGAAGTGCAGGCTCAGAGAGCAGACTGCTGTGGGACACAGCTCAAGCAGGAACCCTTGAGAAACTCCGGGGCTCCATTGTCTAGCTAGCGTTTCTCAGAACTGAACTATGGTCAGACTCTACCTAATTCTGCATTTCCTTCTATCACACAAATCAGAAATACAGAGTGTGAAAGGCTTTCTCTGCTTATTCCTGTTACCTCTGTTTCATGCCATTTCCCTTAATAAGTCTGCAATCATATCCTGGTTTCTAAGGATCTGAACTAATAAGGGAGGTGCTGGGGATGGTATGAGAAAACAAGCAGTATCGTGGTTTAGGGGTCTTACCGCTCAGCCAAAAAGGAGACTCCACCCGGGGTTAACTAAGCACTGTTTTTGTTGTATCCCACAAGTCTTAAGTTATTTTAATTCAAAAATTAAAAATTCTTCAATAACTCTTTTGACCTCCATTTAGCAGTTTTTAAACTCCAAGTATTGACATCTAGCTTTCTGTTGATTTTAATTCCATCATGTTGAGAACACTTTTTAACATTTCTTTTAAACTGAGGTTGATTTAACCACCTCGAATGTGGTCTTGATGAACACTGGGCATGACCTCTAAGAATGTGTATTCTGTTGTTGGATTAAGTTTATAGAAGTCAATTGGATTCAGTTAACTGATAGCTTGCTTCAGTTCAACTATGTCCTTACTAATTTTCTGCCTGGTAGATCTATTACCCATAGAGGGATGTTAAAAGCTCCAAGGACAGAGAAATCCATTTTTCTTTGTAGTTCTATTGGCTTTTGCTGCTTCTACTTTGATCCTGTTAGGCATATGCACGTTAAGGATTGTTCTCTCTCTTCAGAAAATTGACCCCTTTGTTACATGATGCCTCTCCCCACTTTTCTTTCTTATTCTACAGTCAGGTTTGAGTGAAGTGAATTTTTTTTTAGTATTAACATGGATATTTCTCAACCCCTTTATTTTTGCACAAAGTATTCAAATTGAGTTTCTTATAGACAACATACAGTTGTCTCTTGATCCACACTGGTAGTCTTTTAATGGGTGTGTTTAGACAACTGACATTTGATAAGTTGGATTCATATTTGTTATCTTGTATTAGTGGCCTATATTTTTTTCATTTTCTGTTTCACTCTGCCTTCTCTATTTTAAGCTGCATATTCCTCATTACTGTTTTCTCTTCGTGTATTGTAATTCTGATTTTAGTGATCACTCTTGAGATTACAGTCTACAGTTACAATAGATCCTTCTCTTTTAACGAGCATCATACAACTTCATGGGTAGTACAATCTCCTCATATATGTGCTCAGTCACTCAAGTCCTGTCTGACTTTTTGTGACCCCATGGACTATAGCCCAGAGAAGTCTGTCCATGGGATTTTCCAGGCAAGAACACAGAAACAGGCTGCCATTTCCTTCTCCAGGGATCTTCCTGATCCAGGGATGAAAACAATGTCTGCCTTGGCAGGCAGGCTCTTTTTATGACTGTGCCATCTATGAAGCCCTTATAGAAGTGTATTTCCAATTCTTCCCTCATCTTATAATTGTCATTCATTTCACTTGTTTGGTCACTAAGTCATGTCAGACTCCTTGCGACCCCATGGACTGCAGCACGCCAGGCTTCTCTGTCCTCCACTATATCTCCTGGAGTTTGCTCAGATTCATGTTTATTGAGTTGGTGATGCTATCTAGCCATCTCACCCACTGCTGCCCCATTTCTTGCCTTTAATCTTTCCCAGCATTGGGGTCTTTTCAAATGAGTCAACTCTTCATATCAGGTGGCCAAAATATTGGAGCTTCAGCTAAGCATCAGTCCTTCCAATGAATATTCAGTACTAATTTCCTTTAGGATTGATTGGTTTTATCTCCTTGCTACCCAAGGGACTCTCAAGAGTCTTCTCCAGCATCACAGTTTGAAGGCATCAAGATTCTTTGGCATTCAACATTTATGGTCGAAATCTCACATCCATGACTACTAGAAAAAACCATAGCTTTGATTACATGGGCCTTCGTTGGCAAAGTGATGTCTTTTTTTTAATACACTGTCTAGGTTTGTCATAGCTTTCTTTCTAAGGAGCAAAGATCTTTTGATGTTATGGCTGCAAGTCACAGTCTGCAGTAATTTTGGAGCCCAAGAAAATAAAATCTGTCACTGTTTCCACCCTCTCCCTCATTTGCCATAAAGTGATGGGACCAGATGCCATGATCTTAGTTTTTTGAATGTTGATTGTCAAGTCAGCTTTTTTTATTTTACTTACTCAAATTATAGTTGCCAAATACAGTGTTATTTTGTACACTGTTGAATTAATATTTTGCCTTATACTCTCTAGTGCACTTTTCTTATAGCTGCATTTTGACTCCTTTCTGAAGAATTTAATTTCTTTCAAGTTGGTCTAGTGGCACATCATTTGTCTTTCTCCACTTTTGAAAATAGTCTCACTGGATATAGAATTCTACGTTGTTTCCTTTCAGTATCTTTAAGTGTTTCACTCCACTCTTTGCATGGTTTCTGAGTCTAGAGTAATATTTATCCTTGTTTCTCTATAGACAAAATGGTTTTCCTCCTTGAGGATCTTCAGTTTGATTACATGCCTAGGTGTTGATATTTTTCTGTTTATCCTACTCAATGTTCTGAGTTCCCTGGATCTGTGATTTGGTGTCTAGCATTAATTTTGGAAAATTCCCATTGTTCCTTCAAGTATCTTCTGTTCCCTTTCTTCTGCTATTCCTGTGTATGTTACAGTATCTGTAATTGTTCTGAAGTTAAGCGATATTGCTGTCATTTTTGTTCCCACCCCCTTCATGTTTCACTTTTGAAGCTTCTATTAAGTTCACTGATTCTTCATTCATGTCTACTCTATGGATGAACCCAAAGGCTTTATTTCTGTTGATTGATTTTTTTATTTCTAGCATTTCCTTTTTATTCTTTTCATTTCTGCTTACTCACTTTTTCTTTGTATGCTGACCACTTAGAGCCTTTAGTGTGTCCATTTTAAGTTGCCCATCTGTTAATTTCTTTAATCATATTTGAGTCTAGTTCTGATATTTGTTCTTTTCGGGCTGCTTTATCTTCCTTTTGTCTTGCCTAACTTTTTGCTGAAAGCAAAGTATTGTGAACTGGATAAAATAAAACTGAGTTAAGTAGGCCTTTGGTGTGAGGTTGCATATCTGGCTAGGGGTTGCACTGTGATTATTATTTGCTGTAATTGTGTGTCAGGGTAAGCTTTCCTATGGTGTCTGTTTTTGTTTCTTGTTGTCTTTGGGATTCCCAGAGACTTGTTAAAGAAGGTCTTGGACACGTAGTTTGTAGTTATGTGTGTGTGTGAAGTCACTTCAGTTGTGTCCAACTCTGGGCAACCCTATGGACTGTAGCCTGCCAGGCTCCTCTATGGACTTCTCTAGGCAAGAATACTGGAGTGGATTGCCATGCCCTCCCCTCCAGGAGATCTTCTAGACCTAGGGATCGAACCCATATGTCTTATCTCCTGCACTGGCAGGCAGGTGTTTTTTTTTTTTTTTTTTTTTAACCACTAGAACCACCTGGAAAGCCCCAGTTTTCAGTTATATTCCCCTGCCATTGCATTGGAGATGTAATGCTGTGGGGTTAAGTTGTGAGGGACCAGGAAGCATTCTCGAGTTCTTTGTCCCTATGATTAGGTTTCAAGTCTATTATGGATCCTGTGACTTTGGGCTGTGTTCTTCACAAATGTTCCCTTCTTCCTTATGTGAAGCAGGAAGGCTAGAGAGGGTGGGCATTGGGTATTTCCTTTCCCCCTAACACAGTTAGGGTTTGGTAGTCTCTTCATGTTGATGTATGGAAAAATCAATACAATATTGTAAATTAGCCTCCAGTTAAAATAAATTTATATTAAAAAAAAAGAAAACAGGCTTTGTTAACAGAACACTCTGACATTCCAAGATGGTTACTATTCATTCCCACTTCCACTGCTGAAAGAATATAGGACATTTTTATCTTCACTGGGAGAACCTGTTATGGTTCTAGAGGTAAAACTCAGAAGTGTGGGTTTGGGGGCCCCTCCAAAATTAGGCCCCCTTTAATTCACACTTGTCCACACCAGCAATCATAAGTTAAAGTTTCCTACTTGAGTACTGGGTCCTGAGTCACAGGGTCTCTGCTTAGGTAAATAATTCTGTGTCTGCCTTCTGTTTTGAGAGCAGTTTGCCCCTATGACCTTAGTTTTTGTATCAGACTTGTGATTAGTTGCCAGTTTTTATTTTGCTAGGTTTTCCCAGTTGCATGGAGTGACCACTTCCAAGCTCCTTACACGATAGGTGTCACTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCCTTTCCTTCTCCAATGAAAGGGAAGTCGCTCAGTCGTGTCGGACTCTTAGCAACCCCATGGACTGCACCCTACCAGGCTCCTCCGTCCATGGGATTTGCCAGGCAAGAATATTGGAGTGGGGTGCCATTGCCTTCTCCAGTGGTTATGCTTAGGTATTAGTATCTTTCTCTACTACACACAATTGGTGCTAGAAGTTTAAATAGCTGAACAGAAATGCCAGTTTTGAGCATCTATTTATGCTGAGTAGCAAACAGGCATGGAGCATGATAGATGGCATATGTAAGCAGAGTTTGAGAGTAACCAGTCACACAGTACTTTAGAGCTGCACTGAGATCCAGCTTCAAAGCCCACACTTATCACACCCCCAGCTTTCAATGGCCACAGGCGGGCTGAAGAGGTGGCCACACTGGAAACAGGTGTGATGCTAGGGAGACGTGGTAGAAAGCTTTAAGCAGAGGCAACAGCTTGACCTGAGAAACAGGACTGATGTCATGGCATACTCAAGTCCATAAGGTTAGTTTCTAGGATGGATTCAACTACAAAAACAATGAAAGTAAAGTGGACCCAAAGTTGTTTAAGAACAGAGATGAAAGCATTTTACTACCAGAAAGGGACAACTTTTAGCATTGAGCTTTTAGAACTATTTCCAATACTGTTTTTCAAATTGTATTGCCTTTTGCTGTTAGAGTGAACGTCAGATTGTGCCCTCCCCCCAATTCTTCCTCATTCAGTTCCCAATTCAGCCTCATTCGTACCAGCCATATTCAGCCTTTCTTCATGCATGGTATGTGCCCTGTTCTACCGAGTCGCCAAAACCCAACTAACAGTTCACTGCTTCCCTAAACTGCTTTAACCTGAGCTCTTCTCAAATCCTGTCAGTGTTTACATCAAGCTCCATCAAACAGCCATTTCTCCCTCACATGTTCATGGCAAGTGCTATACTAGGCACTGCTTATTTGAAGTATGTAGCCATTCTAGATGACTAGAAATGTTTCCAGGCAGTTTTCTAGAGTCTAATCAAGTAGCAATTATTTGGGAGCTTTGACTGTTTAGCTGTTATGACTATTGTAAGAAATTTGCCCATCCACTATTTGAAATCCTTCTAGGTCTCCCCCCGCTTCCAGCAGCTGAAATTTACTTGCTTGACTATAGCCCAGATGTCCCTTATTTGCCAAATAACCACCTCCATACAGTCTGTTCACCTTAAAACCTTCATATGGGTGATAAGAAAAATGACTCACATTTCCATGGAGGTCTATAAACTTGTTATAAGTCTTACAACACCTCATGTCATGAGAATCAATTCAGTCCTTCTCAAATGGTTTTACCAGCTGGTCAGCCTAATTCTACTTGGCTGAAATAAATCACAGGGTTGGAAGAGCTCTTGGCCATGGGCTATGGAAACTTGAGTCTGCAAAGTGGGGAGGCAGAGTCAAAGAGGTAAAATCAACTTCTAAGGGTTTGACACTAGATAGAGACTATTGGAAAGCTTTATCCCCTAAAGTTATGCTAATTTTTCTTGAGATCCTGCATTTGTCTTGAGATTTTACAAGATCTCAACTACCATTTCTCAAACAGATTAGAGAAATGTTCTCCAGATTACAGACTGGCTGATTGATTCAAATTGTTTCAATTAGGCTCATGCAACTACCTGGAGTCACAGCTGAAGAGGATTCAGCTAACAGCCCTCCCACTCAAGGAGGGTTGAGCAAGCTGCAGCCCCTTACACATTGCAAAGGAAGCCCCTTTAACAACTTCAGCTGAGTTACTGGCTGCTAGAAAGAGGTACAGAGTAGTTGGTTTAACACAATGAGGTGCCGGGAACTTTTAGGATCTAATACATAGGGTAAAGGAGTGACCTAATGATATGCAAGTTAAAAAGTTCACTCTTCAAGTCTGAGAAGTTGACAGAAGCAGCCTGTATGTGCATCTGCTGCTGCCAAGTTGCGTCAGTCGTGTTGGACTCTGAGATCTCATAGATGGCAGCCCACCAGGCTCCTCGGTCCCTGGGATGCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGGGAAAGTGAAGTCGCTCAGTTGTATCCGACTCTTCACGACCCCATGGACTGTAGCCTACCAGGCTCCTCCATCCATGTCCATAGGATTTTCCAGGTAAGAGTACTGGAGTGGGCTGCCATTGCCTTCTCCCTATGTGCATCTAGCAAGTTAATATGCCCCACCCCAAACGTTTAATTTCCATGTTTGATTTGCTGTTCAGTAGCCTCCACTTAAGCATTAAGGCCAGCATTCAACCTAGAATATCCAAAGTAAACCCACATTCAGCCTCTTTATTCCTGTACATGGCATCTAGGATGCTATTTCACATTCAACTATCTTCATTGGTAAAGTCCAGTGAAATTAAGAGGTTAGTTATCCAAAGTTGCTCAATCCTTTTTCTCTCCATAGAGGTATAGTTTACCCTACCTTCTCTATTTAGCTGATACTTAGCCATCAACTATTGAATAATACTGGGTTCTGGTTCTAGTAGCTTATTAGCATCAGTCCCACCATTTCATCTGGCCAGGACTTCAGCAGAAGAGTTGAGCCTCCAAAAGCATTATGTGTGCTAAGTCACCTCAGTTGTGTCCAATTCTGTGCGACCCTATGGATTGCAGCCTGCCAGGCTTGTCTGTCCATGGGATTCTCTAGGCAAGAATACTGAAGTGGGTTGCCATGCCCTTCCCTCCTGGAATCTTCCTGCTCCAGAAATCAAACCCACATCTCTTATGTCTTCTCCTTTGGCAGACAAGTTCTTTACCACTAATGCCACCTGCCTAGTCACAATCCAAAGTGAGCTCTTGCTTGTTCTCTGTCAAGGAAGTGCTAGCCTTAGGGAACAGAGTGTCCCTGAACAATGTGCTTGGCTCAAAACCCACTGGGGACTTGTGTCTGAGAGAACACAGTCCAGGAGAACAGAACTCTATAAAGGTGTATACAGCTGGAAAACAACCTTCTAAGCCCAATCTCAAAAGTGTCTTCTAATCTGGGGGGCAGGCACAGCTAACCAAATTGCCTGTGAGGTTTTTTTAGGAGAGACTTATTAAGAGATCTGACCTTATCAGGTCCCTATCACTGTGGGAACAACAGCAGTTTCCACAAAAATTCAGAGAGTATCTCCCCAGAAGCCTATTTCTCCTGCTAAAAGGCATAGTGAGCACTGAAGGTGGGCCGCCTTTTTAGGGTACTGGAAAAGAGGTTCCACAGGCAGCTTCCACCTTAACTCAAAGCGAGTTAGGCAAAGACTGAACAGAGAGGAGAAAGGAGTCATGTCAGAGCCCTGTGGCCTCCCCACGTTTAGAGAACTGTCTTATTCAAAATTAAGGCAGAAGGAGGAGGTGAAAAGCCAGGCCTCCCGAAGAGGTGAAAATGCTTCGAAAGAAAAGCTAAAGTGAAGAGAGTCTTTTCAGTAGAACATTCTGGTAGGTCCTGGAGGGAGGAGTGACAAAGTCCTTGCAGAAAGAACAAGAAAGCAGAGGCCATTGCCTCACCACCCTCCATCCAGTTCCCGGCTCACCCAACCGCCATCTGACTGAAAAACCGCTAACCTACAAAGAGCAGCCTCCCCTCCAAGTGCGGCTGGGGCTTAGCTTCTGCTTATAAAGGCCTGTTTCGTTGGCGCATGCTCCCTAGGGAATGGCGTGTCATCAGAAAGGGGAAAAACACCTGTCTTCCCATAGCTGTTCTCGCTCTCCAGCTGAAAGAGCCCCACCTCATCAAGGAAGAAAAGGGGAGGCTGAAAGTAACTGAGGCAGCAGTTTTAAGCGGACCCCAGACCACCCAGAGTACTCCACCTCTCACCCAAATGCTGGTTGATGGTAATGAGGGAAACCAGCCAAGAAGACCCATTCCTGCTGCTCTATTGCACCTGAAACATTGAACCGCCAAGCAGATCCAGCTCTGTCCTGCTCTGAAGAGAGCTGCCCTCATCTTTGGCAGGCTCCAGAGAGTAGTCCAAAGCCTAAGTGCCCCTTGAGGAGGACTTGCTGTTAAACATCCTGTGTGGGCCCAACCCAGTGGGAAATTCAGGAGTCATCCCCGGTGATACAAATCAAAAGAAAGTGGTATAAGAGTGAATTCTCTACTACTCTTCTTCCACAACACGGTTGCCAAATTCAGTGACATACACAGACTATGACTGAAGCTTCTATCCCCATGGAAACATGGCCTGATGATCTAGTAATGTGGAGGACACTTTTGCAACTGGCTGACTTCAGTGTAAATATTCAAAACAGGACACTTTTGCAACTGGCTAAGAGCCCCAAATACACACATGGCACCAA TCONS_00170601 TCONS_00170603 r 3' 685175 TCONS_00170601 TCONS_00170603 r 3' 685267 EMBV3_15823 GGAGGCAGATTTCAGAGGACTGAGTCTGAAATTGTACTGCCACAGTATTTTCATTATAGC Gene BVT0102_420114 - 1 EMBV3_16435 GK000018.2:60363261-60369490 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18214 GCCGAGAATGGGTCCTGGAGAAGAAGGCACGCCGCAAGCGCAAGCCTCGCTTCTGAGCAG Variant GeneID:513878|WBSCR22:NM_001034457:170_cdna 799^846 3 EMBV3_19464 GeneID:513878 25 GENE WBSCR22 MGC133842 Williams Beuren syndrome chromosome region 22 protein EMBV3_38134 AAAGCACCACAAGGACCACCAGAAATCTATAGTGATACGCAGTTCCCATCCCTGCAGTCC Gene GeneID:504871|CDV3:XM_002685093:55_cdna UTR3_Alt 2 NULL GeneID:504871 1 GENE CDV3 NULL CDV3 homolog (mouse) EMBV3_32314 AGGTCCACCCTTTCCCATCAGACATGTTCACACTGAGGGTGGGCACCTAAAAGGAAGTCT Gene BVT0102_039132 + 0 NULL GK000013.2:53449626-53456833 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045511 TCONS_00045512 1 XLOC_026452 Coding TCONS_00045511 XLOC_026452 Coding Coding LOC615595 13:53452415-53478970 = TSS33192 5141 3 TCONS_00045511_2 240 6 0.806620471492054 0.000877858710895803 0.00028230766446171 0.000188120130680273 1.74177713699969e-05 1.35280352211116e-05 0.00024297385484907 1.34543098050219e-05 0.000331080294326824 0.000374706704851954 5.58597759864808e-05 0.000369367535426118 8.19057929145335e-05 1.6847732382567e-05 0.000498256832388423 0.000461396349867619 0.00223057833378649 0.00110165587877737 0.000178940857590309 0.000928204933029549 0.000570081619422606 1.6834900309042e-09 0.00023971576719337 0.000291822891234142 0.0010439821914712 0.000480730561180659 0.00101491741852595 0.000716332103192081 0.000831784030842921 0.00116680620359521 0.000280416094677191 XM_005214824.1 STK35 PREDICTED: Bos taurus serine/threonine kinase 35 (STK35), 0.0 8024 99.96 0.866562925500875 NM_080836.3 STK35 Homo sapiens serine/threonine kinase 35 (STK35), mRNA. 0.0 720 73.45 0.233417623030539 TCONS_00045511_2 sp|Q9XSI3|RL10_BOVIN RL10_BOVIN 60S ribosomal protein L10; 2e-57 186 95.70 0.383333333333333 1 coding 0 0 0 0 -1.91779738698951 0.00825242228320761 -0.013590454251127 0.906522014684485 ATGGGGGTGTACTTCCAAGTGGAAGAGATCGGGGGGCCCAGTGTGCAGTGGCTGCAAATAGCAGCCTCCTTGGTAGTGTATGCAACCTGCTGCCTGTACAGACTCCAGACAGGTATGCGCGGTGCCTTTGGAAAGCCCCAGGGCACAATGGCCAGGGTCCACATTGGCCAGGTCATAATGTCCATCCGCACCAAGCTGCAGAACAAGGAACATGTGATTGAAGCCCTCCGCTGGGCCAAGTTCAAGTTCCCTGGCTGCCAGAAGATCCACATCTCTAAGAAGTGGGGATTTACCAAGTTCAACACGGATGAATTTGAGAACATGGTGGCAGAAAAGCGACTCATCCCAGACGGCTGTGGGGTCAAATACATCCCTAATCCTTCCTCGGACAGACAAGGCAACTGCTTGGCTGGCAGAGAAAGCTGCCAGAAGGCTGCTCACTGCCTGGTTGGCACCACAGCCCCTTTGTGCTCTGGACCCCAGACCCATGCAGAAGAGGTGGGAGACGGGAGTGCAGTGCCGATGGCACCTGACCTGCAGGCCAACCACGTCACCAGTTTTCACTGTGCTCAGAGGGATGGCTTCGCCTACTTGGAAGGCTCTACTATGGTTGACCCTCGGGACCCACAGTCTCATCGTGTCTCGCACAGAATTCAGCAGAGGGCACAGGTGGCGGCTTGGCCGGTTGGTGATCTCCTGACAGCCGGGTCTCCAGCAATGTGAAGCTTTCGTTTGGGTTTTCCCCCTCCTCTTACTTTTGCTTTATTTTTTATTTTTTGTCCCCCTGCCTTTGTTTTTTTTTTTTTTAATTTAAATGATTAAGACTTCAGAAGAGCAGGAAGTTATGCTGTGGACAGGCACCACTTTCTTTAAAGAAACTCAATATGGACAAAGCATATGTATAAATTTCATTTTTAATTTTTATAAGGGGTTAGGGAACTATATTGTTTTTGTCCTTTATTTTCCCTGTCTTTTTTCTTTTACCCATCTCTTAGTTCTGCTTATAACACCTCACTTCCCCAGAGAAGGCCTACCCCTCCGTGGAGAATCTGGGGACCTCTCCTGGATCAGGGAGCATGAGGACAGAAGCAGGCCTCTGTGCCGCCTCCCCACCAGGTGCAGGAACTGCTGGACTCCCTGGTGGGCTGCTCCTGGCTGGCCCTTGGGCCTTGGAGATGATCAGAGGCCAAGAACCACCGAGAAGGGGAAGACCAGAGCTTGGCCAGGAGAACTCAAGAAAGAAGATCCCTGTTTGGAGTTTGTCTTCTTTAAGCGGTTGGAAACCCAGAGTCACACCAGGACTTACAGAGGGAATCGTTTCCCTCTACTGCCCTTCATAACCAGGGGTTCTGACGGGGGAGGGCCAGAAGGTGACCATCTCTTACTCCCCGGTAATTGAGCGGCCAGCCCACCCCAGCTCTACAAGCCTACCTTTCTGTCAGTGATCTTCCTCCCAGACGATGATTCCCTGGGAAAAAATGTCGTGCCAAACCTCTGCCTAGGATACAGCAGGGTCTTCAGCTGGCATCTGTCACTCCTGTGAAGTCAGCACCCACCACCTCCTGCCTCCAGGATCATCTTCCCAGATGTGCCCGCCAGATGTCCAGGGTGTCAGAGCCCCCTGAGACCCAGTTGTGACCACTGCCATAAGAACAGGGTGTCCTAAACTGGCTGTTATCTCCTCACAGTGCAGCGTGTGCCCTGTGAGCCAGGCCCCGTGCTGTCATATATGGTGACAATGCCAAGCGTCGTCTCCCTCCCCGCAGAGACTTCCTTTTAGGTGCCCACCCTCAGTGTGAACATGTCTGATGGGAAAGGATGGACCTGGCTGAGCGGGTGGACCACAGCCATCAGGTGACCGTGGGCTTGGTGGCCATGACTCCCGACCCCACCTCCAGTGTCTGTCTGTGTAGCCTTTCTTCCGCTCTCCATCAGTGCTCACGCAGCCTCCCTCTTGGGCTTTCGAAGAGGCGTGTCCTCTCCCCTGGCCAGGAGGAGAGCTGTTCCTCTTGCCCCATACCCAGAAGCCCCTTCAGCTGCTCCACAGGCTTCTCACCCCAGAACAGCAAGGCAAGGAAGGGAAAAGGAGTTCTTCTTTTGTGTTTATCTTTGTTGTTTTCTCTAAACCCGCGTAGAATGGATAGAGGGAGATGTTGGAGGGCATTTAAGTTGGTATGTGACCAAGGGGGGCTTCCCCCCAGAGCCACAGTCCTTCCACCCTGGGAGTCTGGAAGAGACCAGCACAGCATCAGCCCAGACTTGCAAACTCAGCAATGTGTTTGCTCACATTCTTTCCGCCTTTTCTCAAGGCTTCTTCCTCCTCCTGGGCAGATGGCTGGCTGTGGTTAGCAGGGTCCGGCAAGGCGGCAGGTGGTGACCAGGCCCCTCTCTCCCCTGGGGATGCGCTGAGCTGCAGCTGGAAGAGCGCAGCCCCTGATTGCAGTTGGTCCCCTTTTCTGCCCCACCTCCCTGCCCTCCCCTGGGGGCAGCTGTCTGTCCACGAGCACATGGGGAAGCAGTCCCTGGACTTGGCGCCCCCACCTCTCCCTGGCCACAGCCCGCACTCTGAAATCCTAGCGAGGGTTCAAGTCTAACAGGATATTTACCTTTTGCTTATCTTTCCCCTCTCCCCTCCCCAGGTGTCTTAGCTCTGAGTAAGGTCCCAGGTGGCCATACCTTTTGGGCGAGGTGGGTGGCCTCGGTCAGGTAGCAGCGTCCACGTACCTTGGTCTTGCAGGACTCCCAGCCCATCCTCGCTTGGTGGCAGGACCTCCTTCCCTAGCTCCTGAGGCCCAGCTTGTCAGCCCCAAGTGCCTGTCTCTTCCCCTCCCCTGCTCTCCACTTCGTCTGCCTCAGGCACCCAGCAGCCAGTGGAAGGCAGCCTGAAGTCAAGGCTGGCTCTGCCTGGGTAGCTAGCTGCCTGTGGCTCAGCCACTCTGCATCTCTTCTCGCTGGGGTCAGCCACCTGTCCCTTCCTGCCTTTTCACCTGGGTCTCGGGCCTGGCAGCTGCCCTGGGGCACATCATCTCAGCACCACCAATTTATTAGTTCTGTGCAAGTTGTAGAAATCTCTAGTCCTTAAAATAACTGTCGGTTATTCTCCTGGGATCTGTGGAAAGGAGAGTCTTTGGAGGGAGGATCTGAGCTTCATTCTCCCTCAGTGAGAGGAATCAACAAGACAGATCATAGTGCCTTATTCCATTGCCCTCTCCGCCAGACCGTCTGGCTTAGTACATGGCTTCTGTCTCCCTGTCTGTGTCCATCTGTCCTTTAAACTCACTCCCCCACACACATAGCCACGTGGGAGGATGGCTTCCCCGCGACCTCCCCATCCCTTCCTCAGCTGTAGCCAGCCAAGTGTCCCCACCCACCACAGGGCACCACTAGCAGCTTCGCTGAGGACAGAGCTGTGCTGCAGACGGGTGTGCGCTCTGCTCTACTCCCCAGCAGATCCCCACCTCTTCCCTCCAGCCAGAAGGATGCACGTCTCTTTCTTCTAGGCCTTCAAGGCCAGCTCCATCTGACCCCCTCCTGGGCACAGGGACTAAGGCCGTGGACCTTAGCCTCCTCTCATCCAGAGGCAATGGGTCAAAAGTGGAATTCTTCCCCCTAACCCGCTGTGATCCATGCCCCCCATGGCTGCCTTTCTGAGGGAGTGTATTCAATGTTTACTTAAGAAATACCCTGTTTACAGCTGGAGGAGAAGCTTGCCCATTGCTGGGTAGAGATCTGACTCTCTACGGCTCCTGGCCTCCTTTGTGGCACTGCCCATGGTGACCCCAGAGCGAGTGAAGGCAGGGGGCCAGGGCTGGGGCACAGGCCCCACAAGCCCTCTGCCCCTGACCCTGCGGTGCTAAGACCACTTGCCACCTTCCTCACAGCCTTCATTCCCCGCCTCTCATTCCCTTCCTCCAAGATCTCTCTCCTTAACATATCAGTTATTTCCTAGAAAACCAGTGTTTGGAGCAATAAGATTTTTTTTTTTTTTGCTTGAGTCCTTTTCTAAAAAAAGGAAAAGAGCAGACATTGTGGGAATCTTCTTTCTTTTTCTGGTGTTGCTGTTTACCTTTTTAGAAAACAGCTCTAACTTGGATGGATATCTGGGTTTCAGCCTCAGGTTATCCTTAGGAAGCTTGGAGAGGTAGGATCAAGCCTCCACCCCCTAACTCTCTGCTCCTGCCGCCCAGGCTCCCAGCCCTGCCCACCAAATGCGCGCCCACCTTACTCCTCTGTGCCGACCTCTCCCTGCCTGTCTTGGCTCTGCCTCTAAGTGGGACTTTTAGGTTCTTGCCCCTTCCCCATCCTGAGCCTGGGCAGGGGGCCCAGCCGCTGGAGTCTCCAAGACCTGGTAACCTGAGAAGAGCTGAGTTGTGCGGCTCCAGGCTCCAGACCCCCGGCTTGGGGCTGAGGCGCAGCCTTAGGAACAGTGTGGGCCATTTCCGATCCTGCCCTGCCAGGCTTCAATGGCCAGGCCATCTGGAGAGAAGGCACTGGGAGTGGAGCACCAGGATGTGTCGTGAGGTTGGCTAATGTCAGCACACACAGTCAAGGGCTGAGTCCGCTGCCAGTGGCTCCCGGAGTCCCTAAGATTGGGGGGTAAACAGGAAGGAGACCCCTGCATCTTTTTCCCTGAGAGGCTTCAGGAGGAAGGGAGTCCATTTAGGGACATTTTAAAGAAGTCTTTGTTCTCCAGGTGCCTCTTTCCATCAGAGCAGGGAGGATGTTGGAGTGATTTACACTCGTGTGGGGCCAGCTTGGGTGCAAGGGAGGTTTTAACCCAGGCACAAGGTTAGTTTCAAAGACTAGTTAATCTGTTTTCTTTGTTTTCTTTTTTTTGCACAGAAGCTGGTAATCTAGGACCTACGTGTGAACAACTTTATATATGAATATTTTTTGTACTTGGTTTACTTGGGTTGGTATGATACATTATATTTAAGTTCCTCGAACACTGTGGATCCCCCTAATGTGTATGAATGACTGAGGCTTTGTAAATTAAGGGACGTTTGTGTGAATAAAGTTATTTGATGGGGTCAAAGAAGCCATATGTGATTTGAAACGGAGTGCCTTGTGGTTTTGTCGTCTCCTGTGCAGAGGAACTTGTGTGGGTCCTGGTGGGTGAGCAGCAAGAGAAAAGGATTCTC EMBV3_06818 CCCTTACCTCCGACAAGGTGACTGTTTTTCTGTCCTGCCCCAGTCAAAAAGTAGACTCTG Gene GeneID:505242|SLC9A3R1:NM_001077852:347_cdna Constitutive 0 NULL GeneID:505242 19 GENE SLC9A3R1 EBP50 NHERF-1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 EMBV3_13620 CCTTGGGTGCCATTATGCCCATTTCAGAGCTCCAAGGACGCTGGGCCACTCAAGTATTTA Gene GeneID:788719|FMO5:NM_001101304:7_cdna UTR3_Alt 2 NULL GeneID:788719 3 GENE FMO5 NULL flavin containing monooxygenase 5 EMBV3_39988 ATGCCCACGAGATTCCATATCAACCAGCCTGTGGATAGGCATGTGGACCTGCTAGAAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16026 ATGCCGCCCTGTGGGGGTCGAGAATTCAGGGAGTACTGTCAAGCCCAACAGCCCAAAACT Variant GeneID:527379|ZMYM1:XM_002686484:564_cdna 182^345 2 EMBV3_08593 GeneID:527379 3 GENE ZMYM1 MGC127968 ZNF262 zinc finger, MYM-type 1 EMBV3_36485 GGCTACTTTATTGAATTTAACAAAGACCATGGATATGTTTGGGGTGGATTTGGGGTGTTG Gene GeneID:533853|SENP6:XM_002690035:31_cdna UTR3_Alt 4 NULL GeneID:533853 9 GENE SENP6 NULL SUMO1/sentrin specific peptidase 6 EMBV3_13091 TTTTCATCACAAAGCTTGGAACTATCCCGTGCGTTTCCTCAGCGGTCTCTCCGAGGCTAA Gene BVT0102_359667 + 0 NULL GK000018.2:54373315-54425389 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084087 TCONS_00084086 1 XLOC_051457 Coding TCONS_00084086 XLOC_051457 Coding Coding ARHGAP35 18:54410572-54495869 j TSS63063 4427 1 TCONS_00084086_8 1354 6 0.948168730069405 5.36181155682989e-55 6.77342312696243e-42 6.99076651155485e-50 0.000885921315984261 0.000486635974013382 1.47230393850599e-45 0.000362106192066382 0.000611940712661964 0.00104507750616918 0.000328290721958166 0.00053315095215213 8.45019594574904e-09 0.000545033077011459 2.11447327625576e-05 0.00036317818977736 0.000763060060645414 0.00052623390303613 0.00215838884823235 0.00254947810122673 0.00204738347948038 7.88852775750205e-76 2.28295826591958e-60 0.00187670265959836 0.00170599577122115 4.30115673453172e-40 0.000197646374233864 1.17721793683778e-08 2.22385639936276e-39 2.42763386662067e-05 1.46583113840036e-62 NM_001192398.1 ARHGAP35 Bos taurus Rho GTPase activating protein 35 (ARHGAP35), mRNA. 0.0 7285 100.00 0.912130110684436 XM_005258823.1 ARHGAP35 PREDICTED: Homo sapiens Rho GTPase activating protein 35 (ARHGAP35), transcript variant X1, mRNA. 0.0 5844 91.28 0.937203523831037 TCONS_00084086_8 sp|Q9NRY4|RHG35_HUMAN RHG35_HUMAN Rho GTPase-activating protein 35; 0.0 2706 98.07 0.994830132939439 3 coding GTCAAATTGGGGAGGAAGTATTCTGACAGAATTGTCTTAAAATTAACATGGAGCAATGATTTAGCCTCGGAGAGACCACTGAGGAAACGCACGGGATAGTTCCAAGCTTTGTGATGAAAAGGATACAACTAAGGCCACAGTAGTGGTGTTGGAGAGGAAAATGCAGTCCAAGGAGGAAATGTTGGCTATTCGGCGATGAGAAGTGGCAAAAACTGACCTCGTACTGGTATACAAACACTATGAGATCTGACACTTTTGCTTCGTGGGCAGCCAGCCCCCACTGATAATGTGGGGAAGCCTTTGGGTCCACGGGAAAACACTAATCTGATCTTGGAAGTGGCAGATTGTGGCAGGATGTGTCGACGATGATGATGGCAAGAAAGCAAGATGTCCGCATTCCCACCTACAACATCAGCGTGGTGGGATTGTCTGGGACGGAGAAGGAAAAGGGCCAGTGCGGCATTGGGAAGTCCTGTTTGTGCAACCGCTTCGTGCGCCCGAGTGCAGATGAGTTTCATTTGGACCATACCTCTGTCCTTAGCACCAGTGACTTTGGTGGGCGAGTGGTCAATAATGACCACTTTCTCTACTGGGGAGAAGTCGGCCGTTCCCTGGAGGATTGTGTGGAATGTAAAATGCACGTTGTGGAGCAGACCGAATTCATTGATGATCAGACTTTTCAGCCTCATCGGAGCACGACCCTGCAGCCGTATATCAAGAGAGCCGCTGCAACCAAGCTTGCATCAGCTGAAAAACTCATGTACTTTTGCACTGACCAGCTGGGGCTGGAGCAGGACTTTGAGCAGAAGCAAATGCCAGATGGAAAGCTGCTGATTGATGGTTTTCTTCTTGGTATTGATGTTAGCAGGGGCATGAATAGGAACTTTGATGACCAGCTCAAGTTCGTCTCTAATCTCTACAATCAGCTCGCAAAAACAAAAAAGCCCATAGTGGTTGTCCTGACAAAGTGTGATGAGGGTGTTGAGCGGTACATTAGAGATGCGCATACTTTTGCCTTAAGCAAAAAGAACCTCCAGGTTGTGGAAACCTCAGCAAGATCCAATGTAAATGTGGACTTAGCTTTCAGCACCTTAGTGCAACTCATTGACAAGAGTCGGGGAAAGACAAAAATCATTCCGTACTTTGAAGCTCTCAAGCAGCAGAGCCAACAGATAGCTACAGCAAAAGACAAATATGAGTGGCTGGTGAGTCGCATCGTGAAAAACCACAACGAGAACTGGTTGAGCGTCAGCCGAAAGATGCAGGCCTCTCCTGAGTACCAGGACTATGTCTACCTGGAAGGGACTCAGAAAGCCAAGAAGCTGTTTCTCCAGCACATCCATCGCCTCAAGCATGAGCACATTGAGCGCAGGAGGAAGCTGTACCTGGCAGCCCTGCCCTTAGCTTTTGAAGCTCTTATCCCCAACCTAGATGAAATAGACCACCTAAGCTGCATAAAAGCCAAAAAGCTGCTGGAAACCAAGCCAGAATTCTTGAAGTGGTTTGTTGTGCTTGAGGAGACGCCGTGGGATGCCACCAGCCACATTGACAACATGGAGAATGAGCGGATTCCCTTTGACTTAATGGACACCGTCCCTGCAGAGCAGCTGTACGAGGCCCACTTAGAGAAGCTACGGAACGAGAGGAAACGAGCTGAGATGAGAAGGGCGTTTAAAGAAAACCTGGAGACTTCTCCTTTCATCACTCCTGGCAAGCCTTGGGAAGAGGCCCGCAGTTTTATTATGAACGAAGATTTCTACCAGTGGCTAGAGGAATCTGTATACATGGATATTTATGGCAAACACCAAAAGCAGATTATAGACAAAGCGAAGGAAGAGTTTCAGGAGCTGCTGCTGGAATATTCAGAGTTGTTTTATGAGCTGGAGCTGGATGCTAAGCCCAGCAAGGAGAAGATGGGTGTCATCCAGGATGTGCTTGGGGAGGAACAGCGGTTTAAAGCGTTGCAGAAGCTCCAAGCGGAGCGGGATGCCCTCATTCTGAAGCACATTCATTTCGTGTACCACCCAACCAAGGAGACGTGTCCTAGCTGCCCCTCCTGCGTGGACGCTAAGATTGAGCACTTGGTGAGTTCTCGATTTATCCGACCGTCTGACCGGAATCAGAAGAATTCACTCTCTGACCCCAACATTGATAGAATCAACTTGGTGATCTTGGGCAAGGACGGCCTTGCCCGAGAGCTGGCCAATGAGATTCGAGCTCTTTGTACAAATGATGACAAGTATGTAATAGACGGGAAAATGTATGAGCTCTCCCTGAGGCCAATAGAAGGGAACGTCAGGCTTCCTGTGAACTCTTTCCAAACACCAACGTTTCAGCCCCATGGTTGTCTCTGCCTTTACAATTCAAAGGAGTCTCTGTCGTATGTGGTAGAAAGTATAGAGAAGAGCAGAGAGTCCACACTTGGCCGGCGAGATAATCATTTAGCCCATCTCCCCCTGACTTTAATTTTGGTTAACAAAAGAGGAGACACCAGTGGAGAGACCCTGCACAGCTTAATACAGCAGGGTCAGCAGATTGCTAGCAAACTTCAGTGTGTCTTTCTTGACCCTGCTTCCGCCGGCATCGGTTACGGGCGCAACATCAACGAGAAGCAGATCAGTCAGGTTTTGAAAGGTCTCCTGGACTCCAAGCGCAACTTAAACCTGGTCAGTTCTACCGCTAGCATCAAAGACCTGGCTGACGTCGACCTGCGGATCGTCATGTGTCTGATGTGTGGGGATCCTTTTAGTGCAGACGACATACTCTTTCCTGTCCTTCAGTCCCAAACCTGTAAATCTTCCCACTGTGGAAGCAACAACTCTGTTTTACTTGAACTCCCAATCGGACTACACAAGAAGCGCATCGAACTGTCTATTCTTTCATACCATTCCTCATTTAGCGTCCGAAAAAGCCGATTGGTCCATGGGTACATTGTTTTTTACTCAGCCAAACGTAAGGCCTCCTTGGCTATGTTACGTGCCTTTCTCTGTGAAGTGCAGGATATTATCCCTGTTCAGCTGGTTGCACTCACTGACGGCGCTATAGATGTCCTGGATAATGACTTAAGTCGGGAGCAGCTGACCGAAGGGGAGGAGATCGCTCAAGAAATTGATGGGAGGTTCACGAGTATCCCCTGTAGCCAACCCCAGCATAAACTGGAGATCTTCCACCCCTTTTTTAAAGATGTGGTGGACAAAAAGAACATCATTGAGGCTACGCATATGTACGACAATGCTGCCGAGGCCTGCAGCACCACCGAAGAGGTGTTTAACTCCCCCCGGGCAGGCTCCCCCCTCTGCAACTCCAACCTGCAGGACTCAGAGGAGGACATCGAGACCCCATCGTACAGCATGTTTCGAGAAGACACACCATTGCCCTCTCTGTCCAAAGACCATTCCAAGCTCTCTATGGAACTGGAGGGAAATGATGGGCTGTCCTTCATCATGAGCAACTTTGAGAGTAAACTGAACAACAAGGTGCCTCCGCCAGTCAGACCAAAGCCTCCTGTGCATTTTGAGATCACCAAGGGGGACCTGTCTTACCTGGACCAGGGCCACAGAGATGCACAGAGGAAGTCCGTCTCGTCGAGCACCTGGCTACCTCCAGACGGGTTCGATCCTTCTGATTATGCTGAACCCATGGACGCTGTGGTCAAGCCAAGGAATGAAGAAGAAAACATATACTCGGTGCCCCACGACAGCACACAGGGCAAGATCATCACCATTCGGAACATCAACAAAGCCCAGTCCAACGGCAGCGGGAACGGTTCCGACAGCGAAATGGACACCAGCTCCTTGGAGCGGGGCCGCAAGGTATCCATGGTGAGCAAGCCAGTGCTGTACAGGACGAGATGCAGCCGGCTGGGGAGGTTTGCTAGTTACCGAACCAGCTTCAGCGTGGGGAGCGATGACGAGCTTGGGCCCATCCGAAAGAAAGAGGAGGATCAGGCATCCCAGGGTTATAAAGGAGACAACGCTGTCATTCCATATGAGACCGATGAAGACCCGAGGAGGAGGAATATTCTTCGCAGTCTAAGAAGAAACACTAAGAAACCAAAGCCCAAACCCCGGCCATCGATCACAAAGGCAACCTGGGAGAGTACCTATTTTGGGGTGCCCTTGACAACCGTGGTGACTCCGGAGAAGCCGATTCCTGTGTTTATCGAGCGATGTATCGAGTACATTGAAGCCACAGGGCTGAGCACTGAAGGTATCTACCGGGTCAGCGGGAACAAGTCAGAGATGGAGAGTCTGCAGAGACAGTTTGATCAAGATCACAACCTGGATTTGGCAGAGAAGGACTTCACGGTGAACACCGTGGCGGGGGCCATGAAGAGCTTTTTCTCAGAACTGCCAGACCCCCTGGTCCCGTACAACATGCAGATTGACCTGGTGGAGGCCCACACCTTGGTCTTGGCTTTCTCTTTC EMBV3_39371 CTGAAAGCTTGCTGCCCCAGACCCAAATTACTGCTAAGAATCAAAGACTTCCCCTCCACC Gene BVT0102_354303 + 1 EMBV3_14617 GK000018.2:22541541-22692051 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20486 GGCTGCCCCAGTTGGGAAGTGAGGCGGTCGCTCTCTATTTTCAAATGTTGCTGTAGAAAT Gene GeneID:518136|KLC2:NM_001075768:33_cdna Constitutive 0 NULL GeneID:518136 29 GENE KLC2 MGC143149 kinesin light chain 2 EMBV3_27637 TCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGAGA Gene GeneID:539607|LRRC4B:XM_002695131:648_cdna Constitutive 0 NULL GeneID:539607 18 GENE LRRC4B NULL leucine rich repeat containing 4B EMBV3_12763 GGGTTTGGCTGGTTTTTCTTGCATGGTTTGGAGCCGATCACTTTTCTGTCACCTGCTAGG Gene GeneID:516039|MAP2K3:NM_001083693:39_cdna Constitutive 0 NULL GeneID:516039 19 GENE MAP2K3 MGC151903 mitogen-activated protein kinase kinase 3 EMBV3_42670 AGCATCTGGGACTTCGTCTCTGGCAGCTTCTCTCCCAGCCCATCCCCAATCCTGAACGCC Gene GeneID:522441|LOC522441:XM_002697911:533_cdna Constitutive 0 NULL GeneID:522441 25 GENE LOC522441 NULL similar to zinc finger CCCH-type containing 5 EMBV3_24405 CCCACGTTTCCATGCAGACTTCTTACACAGACATGTGAGAGGGTCACGGTTACATCTGAT Gene GeneID:100337064|LOC100337064:XM_002697630:170_cdna Constitutive 0 NULL GeneID:100337064 23 GENE LOC100337064 NULL hypothetical protein LOC100337064 EMBV3_11448 GCTGGGTACGTGACCAACGCCCACTGAAGTTTCATGAGTATGAGGAAGAGGATCTAGAGA Gene GeneID:538817|RNMTL1:XM_002695710:317_cdna Constitutive 1 NULL GeneID:538817 19 GENE RNMTL1 NULL RNA methyltransferase like 1 EMBV3_33856 ATCCTAGATTCCATCAGTCAGCACAAGGTCTGTGCCTCTGAGAACCACCTGCTGCCGTGA Gene GeneID:100125236|MCPH1:NM_001103315:2_cdna Constitutive 0 NULL GeneID:100125236 27 GENE MCPH1 MGC148665 microcephalin 1 EMBV3_30760 CGAGCCCCGACCACCGCGAGGAGGAGGCGGATGTGAGGTGAAGATCAGCCAGCAGCCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13201 CCATGGCAGAGGAACGTACCAAGAGACAAGCAGCAGAGATGAAACAGGATCTGCTAACAC Gene GeneID:100298387|LOC100298387:XM_002686243:283_cdna Constitutive 0 NULL GeneID:100298387 3 GENE LOC100298387 NULL similar to guanylate binding protein 2 EMBV3_35928 GGAATCTCTGACCGTGGCCTTCGTTGTTACTTTCTATGATGTGTATGTTGTCCTGCAAGC Gene GeneID:513242|TMBIM4:NM_001014914:1007_cdna UTR3_Alt 2 NULL GeneID:513242 5 GENE TMBIM4 CGI-119 MGC129065 transmembrane BAX inhibitor motif containing 4 EMBV3_26446 GAGATGAAGGGTCGCAATGGAAGAGTGTATTGGACTTGGGAGTCAAGACAGCCAGAAGTC Gene GeneID:528646|ABCD4:NM_001015636:139_cdna UTR3_Alt 4 NULL GeneID:528646 10 GENE ABCD4 NULL ATP-binding cassette, sub-family D (ALD), member 4 EMBV3_13364 TAAACTTTCCACAGCACAAAGCCACTTAGTATTTAGACTACGTTTTTGCACACTTCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42312 CTGGTTGACTTCATCTCAGCAGTTGTGACGTTGGTGCTCACTCTGATGCTGGTGATTCTC Gene GeneID:781279|LOC781279:XM_002687424:174_cdna Constitutive 0 NULL GeneID:781279 5 GENE LOC781279 NULL similar to olfactory receptor Olfr227 EMBV3_01273 GGTTCTCTTCAGCGAACAGCACTATAGCAAAAGAAGATCGTTCCATATCGTATGCCCCAT Gene GeneID:781721|C16H1ORF21:NM_001081547:132_cdna Constitutive 2 NULL GeneID:781721 16 GENE C16H1ORF21 MGC155149 chromosome 1 open reading frame 21 ortholog EMBV3_35603 AGGCCCATGTCCATTTCAGCCTGGCCATAACATCAGCACCTATTTGAATGTCCTAACGCC Gene GeneID:515657|HEATR6:XM_002695621:15_cdna UTR3_Alt 2 NULL GeneID:515657 19 GENE HEATR6 NULL HEAT repeat containing 6 EMBV3_14228 ACCCAGAACCCGAGGACGAAAACCTCTATGAGAAGAACCCAGACTCCCACGGTTATGACA Gene GeneID:404161|NDUFB11:NM_001033620:8_cdna Constitutive 0 NULL GeneID:404161 X GENE NDUFB11 ESSS MGC127141 Np15 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa EMBV3_34205 GTTATGAGTCTGCGAGTCTGTTCCCTGCTGCTTGCACTGTGTTGGATCCTCACCCACATT Gene GeneID:506633|LOC506633:XM_002691556:2_cdna Constitutive 0 NULL GeneID:506633 11 GENE LOC506633 NULL similar to olfactory receptor 414 (predicted) EMBV3_16901 CTCTAATGTTGCCATAGAACTGTTGATGGGAAGGCAGGCTCTGTTCTCTTCACAAACCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39797 CTTGGTCGTGCTGATGCCCAAAGTTCCTTAGAAGGGCCAGGAAAGGCTGAGTACCAGTAA Gene GeneID:517520|CCDC21:XM_002685702:374_cdna Constitutive 0 NULL GeneID:517520 2 GENE CCDC21 NULL coiled-coil domain containing 21 EMBV3_15539 TCAACATGATTCCCAGCGTCGTCACTGTGTCTGGCTCCAGGTCCCTGTTCTTCTGCTTTT Gene BVV0102_235797 - 0 NULL GK000020.2:36656529-36707137 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29671 CAGCGGGACTCTGTTGACGCCATAAGTATGGTTTCCTTGGGCCCTCAGAGGAGCGCAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04566 TGTACTTCAGCATGGACGATGGCCTGACTCGCTTCACCGACCTGCTGCAGCTCGTGGAGT Gene GeneID:508847|GRB7:NM_001046014:94_cdna Constitutive 0 NULL GeneID:508847 19 GENE GRB7 MGC138032 growth factor receptor-bound protein 7 EMBV3_05876 GGCAGTCATAAATAGGACGACCCTAGGAGAGAGACGCATGGCAGATGCTTGGAATACTGA Gene BVV0102_033153 + 0 NULL GK000018.2:63356163-63374765 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16556 AGGAATATGAAAGCTATTAAAATGTCTTAGACCCCCTGCCTTTCACGAGAAGAAGAGAGG Gene BVV0101_009780 + 0 NULL GK000013.2:58725284-59023079 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33964 TGGACAGGACCAGCAGCGGCAACTTCGCAGGGAATCAGGGCTTCACCTTCCTGACTCTTA Gene GeneID:508879|LOC508879:XM_002699367:284_cdna Constitutive 0 NULL GeneID:508879 29 GENE LOC508879 NULL similar to aldehyde dehydrogenase 3B1 EMBV3_08862 GAGTCTCCACCTTGACTGGAACAGCCGAGACACGGGAAACGGACAGAGGTTGCAAGTTGG Gene BVT0102_079429 + 0 NULL GJ058430.1:1-38121 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15018 CACACCCTCACCTCCCCTCTGGCCCCATGTAAGTCCTCTCTTGTTTTAGTAGTTTGCAGT Gene GeneID:513605|GTPBP2:NM_001083421:270_cdna Constitutive 0 NULL GeneID:513605 23 GENE GTPBP2 MGC143095 GTP binding protein 2 EMBV3_34310 TCAACAGGGTATATGGTCTGGTGGTGGCCTTGTTGGTTGCTGGGGTAGACATCTCAGCTA Gene GeneID:787988|LOC787988:XM_002707694:534_cdna Constitutive 0 NULL GeneID:787988 15 GENE LOC787988 NULL similar to olfactory receptor 654 (predicted) EMBV3_03295 AGGGAAACCCTATGGCAAACCCCGAGTCGCTGAAGGACAAGGCATGAGGCAAATGCTTAA Gene BVV0102_130219 + 0 NULL GK000028.2:24482787-24556239 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245802 TCONS_00161883 2 XLOC_150831 XLOC_098768 Coding TCONS_00161883 XLOC_098768 Coding Coding - 28:24526889-24535499 - TSS121215 8610 1 TCONS_00161883_14 188 0.835191637630662 1 0 0 0 0 0 7.16780023458786e-08 6.92422493112687e-08 6.7731834305355e-08 0 6.54565747942146e-08 2.30382144816538e-05 9.22647776926075e-06 1.660734004138e-05 1.44418807736243e-06 1.20858083532809e-05 0.000104269577325321 0.00151550402631552 0.00067664519083517 0.00108576844911223 9.25400318589024e-08 4.17621390149196e-07 3.17323760352572e-07 0.000216329147752133 0.000830324765078093 0.000423540276648184 0 9.00117054494467e-07 1.18572848025678e-07 0.000396493397349847 0.000173468027603278 0.000407174664335038 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2908 86.20 0.281765389082462 TCONS_00161883_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 3e-11 63.2 31.58 0.851063829787234 0 coding 1 1 1 1 -0.106278234926035 0.342206570851261 -0.00132455368543817 0.982085910048395 CTCTGGAGAGGCTACTCTTTGGTATGTCCCAAAGGCGCTATTTGCTGAGCCCCAGTAGTGGTTACCCAAGCCAGTGGGGGTTCTTCTGTCCTTAATCTTCTCTGTGCCAAGGATCAGGCCAATGAAAACTGAGCACAGGTCAGGTATTTAGCAGATTTTCCAGCAGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTCCCTCCTGTCCTTCAGCTCTCTCTCCCAGGACTCAAGCCTGGGGAAAACCCAAGCTGCCCGGCTTCAGGACCTAATGAAGCTCAGGTTCTGATGTCTCACAGCAAAAATTCCGTGAGAGACAAAGCAATGAGTAAGAGGTGGATTTGTTAGGATTCCGAGAGAAGCACACTCTCCAGGGTGTGGGCCATTGCCGAGGGCAAGGGCCAGGGCTATGGAATTCAGCCTGGCTAGATTTTGCTAGGAGGGTGAATTCATATGCTGATGAGTGGGAGGATCATCCCAACCATTGGGGAACCGTCCACTCCTCCATCTTTTGACAGTGCCTTACAGCTGTCCTGCCACCTCTGGGTGTGTCTTTTGTCTTATTGATTGGAATCAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATCAGTTTATGTTATACCCTTGTGCTATGTCGTTCTTTCAAAGGTTGTGCCCTGCCCCCTTCCCTCCTGTTTCATGCTCTTTTCCTCAGTCCCATCTGAGCCCACAATGTTGCCTCTACGATCTGGAGGGACAACCAGAAAATAGCTGGCCCTTGGGAGGGAAATACTGTATAATATCCAACCCCTCTAGGTATTCAGCCCTTCATCTTCCATGTTTCCTACCACATGTGCAACACCAGCATTTCTCAGTGAACCCACTAGGGCGGGGGACAGGCACACAACGCCTGCTAGAAGTCCATCTGTTGGCCTCCCTTCAAAGGCAGTTGGGCTTCCAGGGATAACATTTGCCACTTTGGGAGTTAGCCCTGCAGGCCGTTTGGGCCCAACCCCTTACCACCCTTCTCCTAAAGTTACAAACATACCCCTGGATCAAATCTCCACTCCACTTTTATGGAACATCTGGTCTGTTGCCTGTTGACAAATATGTTCTTAAGCCAATTACTAACTCCTACAATCAGGACCCTGTCCCCTTGTAGGCAGCATCGCTCCACCCAGCCTATTATTAAAATACCTTAATGTCCCTAACAGGGCCAGATAACCCACTCCTTTGTCACTACTTCTGTTTTTACCTAAAGTGGGTCTATGACAACAAAATGTTTACCATTGGAGACATCCTGCTCTTATGGAAGACTAGGGAAAAAATCAATGATTTACAATCCCTTAGAACAGTAAGAGGATAAGGCTTATGACTGTTACACTGTTTCCCAGTCTCAGGGCACAGGCTTGGATTACTTTACATCATGATATCTATTCCCATCCACTGTGGACAAACCAGCAATGTGTTAAGATTACAACCCCTTAATCCTACCCAGCCCTGGTCACACTGAAACCTTGGGGATGCCCAACTCCAGTCCAGGGGTCCCAGGAGGTCAACTTGCCTTGACCTGCCTAGGGATCTGGTCCTCGAAAGGTTGTCACTCCTCAACCTGTTCAGGGATCCACCAGTCCAGGGGTCCCAGGAGGTCATCATGCCTTGACCTGCCCGCGGATTCGATCTCCAGGAGGCTGTCATGCCTCAGCCTGCCAGGGAATCTGCACCCTGACCCGGGGATGCCTGGCTCTCAGGCTGCAACAGTACTGGGTAGGATAAGCTTCAGAAAGACTCACCCCTAAGGAAGTCCACCCATGGAAATAGAAGGAAGCCTATTACTTGTGGGACTGTGCCCAGTCTCAGCAATAATTCAGGAGCCAAACGAGAACCCCCATTGCCTTTCTGGAAAGGCTAAAAGAGGCCCTCCAAAAGTTTACCAATCTGGACTTAGACTCTTATGAGGGACAGGTGATTTTAAAGGACAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAACAGTTACAGCAGCAGGACCCGGCTTCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGAGAACAGGAGAAGGAGGCCAAGGCCCACAAGAGGGAGAGAAGGAAAGAGACAAGGCATGCCCAGATGCTGGCCGCACTCCAGGGAAACCCTATGGCAAACCCCGAGTCGCTGAAGGACAAGGCATGAGGCAAATGCTTAATCTGTAGACAGGCGGGGCATTGGGCCAAAGAGTGTCCAAAGCGTGACAAGTCTCCTAAAATGGCTTGCTACAAATGCCATCAACTGGGACATTGAGCGGCACTCTGCCCCGGGGACCCAAGAGCCTCAAGGTCAAGTGCCAAGCCTTCCCTCACGATGGTTCAAGAGGACTGAAGTGGCCCGCTCCAGCCAGCCCACCTGTCACAGATAACTATCATGGGGCTGGAGCCAAGGGTGCAACTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGTCTACCTACTTTGTCCTGACCTCCTACTTCGGAGACTTCTCCTCCCAAACCTGTACCATTTTGGGTGCCACAGGAAAAACAACTACTAAAAGATTCACCCAAACACTTCTTTGTTGCTGGGATGGACAAATATCTTCCCACCAGTTTCTGGTGGTCCCTGAGTGTCCTACCCCCTTATTGGGAAGAAACATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGCTTTTCAGCCCCTAGAGCCCTACAGCTTCTGGTTACTACTGAACACCTTCTCTAATAGAGAGGGACCAAAAACTATGGGAGGACAAAATTATCCCCCAGGTGTGGGTCCAGGGAATTCCTGGACGAGCCCACCAAGCTGAACCGGTCATCATTGTCCTCTGAGATCCCACTCAGTTTCCTAACCAGAAACAACATCCCCTCAAAAGAGAGGCTCGGGAGGGACTATAGCCTTTAATAAATAAATTCCTTGCTTGTGGGCTATTGGTCCCCACCAATTCTCCATGTAACACCCCAATCCTCTCAGTAAAGAAAAAGGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCCATCCCACAGTACCCAATCCCTATGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACCACTGGCTAAAGAATCCCAATACCTTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACCTCAACAGATGACTTGGACAGCATTACCTCAGGGGTTCAGAGATAGCCCCCACTTGTTTGGACAGGCCCTTAGCCAAGATCTCCTAAATCTGGACCTGCGATCTAACGGGAAAATATTACAATATGTAGATGACCTCCTAATCTGCTCTCCAGATGAGAAAAATGCCCAACAACATGCAATTCAGGTTCTAAGCTTTTTGACAGAAAGGGGCTATAAAGTCTCCCGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACTTACCTGAGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCTTCTGATTGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCATGACTCAAAAACAATTGTGAGCTGTCCTGGGGCTAACTGGGTATTATAGAATCTGGATACCCAACTATGGTTTAACTGCCCAGCCCTTATATGAAAGCTTAAAAGGAAGGGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGAAGGCAGAGGCCATACTAAAACAGGCCTTAACTCAGGCACCTGCCTTAAGGTTGCCAAACCCAGAAAAAGCATTCCAACTTTATGTCCGTGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCTATCCAACCACCCGAAGCTGGCCACCCTGCCTTTGAAATCTTGCAGCTATTGCAATCATGATAACAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCAGCAAGTTAACTCCTAAATGGGAGAGGCCATTTATGGATGTCTGATCAACGAACCCTCAGATATCAAGTAATGTTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCAAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTTGGAAGATCCTCTGACAAATTCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTAGATGGAAAAAGAAGAGCCAGATATGCAGTAGTGTCCAATTTTGAGATCATAGAGGCTCAGCCTCTGCCACCAGGTTAACAAGCTACAACATGCAGTGCCAGTTCAACAAAGATATGAAACTACAGCTGACCATGGAAAATATCACTTACCCTTAGATGGACACCGCTACAAGGACTCTGAGGCTTGAGACTAACAAGAGGGGGAGGCCCAATACCCCCTTGCTGTCCCAGTTCAGCAGGAAGTAGCCAGAAAAACCTAGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGAATGTTAGGTAGTTAGATAGGAAACAGGAGTCCAAAATGGCAGTGGCTAAAAGACAAGGAAAGGAAAAGCCCGCAAAAATAGAACAAATGAAAGTCAAAGGAAGGTCCGAGGACCTGAGTGAGGACCTCAGGTAGAACAAACAGCATTCCTGGCTAGACCAATTTACATAGGGCAGGCCCAGGGGGAGGAACAAAAAACATAAAAAGAGGAGCCAAAGCACATGCTCTCTCTCTCTCCCACGTGCTGGCGTGCTCCCCCACTCTCTTCTCTTCGCATCTTTGGGTCAGTATGCCCTCACGCCTTGAGGGTGGATTCTCTTGCTATTTTCTAAGTAAAATAGAGCTGTAACACTGATTTGTCTAAGAGCTATAACATGGTCTGTCCAAGACCTGAGAGCTGTGACGTGCCGAGGGCTTTAATATCCGTCACTCCAAACCTTTGTTGTGACGAGACAGAACCGAGGAGTATACGCTCACCTGACAACATAGAAGGAAACTCCCGTAGGGTTATCTGCCGATTTCTTAACAGAAACTCTACAAGCCAGAAGGGAATGGCACGATATATTTCAAGGGATGGAAGGGAAGAACCTACAACCAAGAAAGTATACTTCACCCAGCAAGAACTCTCCTTCAGATATGATGGAGAAATCAAAAGCTTTCAGTCAAGTGAAAGTTAAAAGAGAACTCTTCACCACAAAACCAGCTTTACAACAAATACTAAACGAACTTCTCTAGCCAGAAAACACAAAAGAAAGAAAAGACCTACAGAAAATAAACCCAAAACAATTATGAAAATGGTAATAGAATCACATACTGTACTATACTTAGTTGCTCAATCATGTCTGACTCTTGGTGACCCCAAAGACTGTGTAGCCCACCAGGCTCCTCTGTCCGTGGAGATTCTCCAGGCAAGAATACTGGAGTGGATTGCCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGGATCAAATCCAGGTCTCCCACACTGCAAGCGGATTCTTTACCATCTGAGTTACCAGGGAAGCCCTCATACATACGTATCGATAATTACCTTAACTCTAAAAGGATTAAATGCACCAATCAAAAGACTGGCTGGCTGGATGAGACATAGACTGACTGGGTGAATGAGAACACGTACATATTTGCGCTTTGATTTACCACATCACTCTACTTAATCCCCCAAATTGTATGTAATTATTTTATATTGTTAGGTTAATCATGTTTACATAATGACTTGCAATTGCAATTAATTTTAATTTTTAGTCTGGCAATTGACTGTAAAAACTGATAAACATCTTTTACTGTTGTGATTATGTAATTACTATTCAATTAATGCCCTAGTTTCATGATTGGTCAACAGAAAATAATAGAATTCTGTATCACCAAAATTACCATTTAATACAAAAACCTATAATCACTTTTTAGATTCCAGATGCGTATCAGAGTCATCTCGGAATTTTTTGAGAAATACAAATGCCCAGATATTGCTATTCTTCTCTAAAGCTCCAGATGTATTTTAATGAGCAGCCATGTTTAAAAACAACTGGACTATATGATGACCTTTTAATTTTATCTAGTTTGTTTCACTTTTTTATTTTATATCCAGCGCTCCCATTTCATTTAGTTTACGTTTTTCAATTTCTGTCTCTTTGTGTTGCTGTTACTGTTCTTTCTCTAGCTTTTATCAAGAGTTGTAGAAAAGCTTTTGTATTCATATATATAGTATATATAATATTTACTTTAGAAAATTTATGCATTTTTGCCTAGCTAAAAAAACTTATGACATTTTGATTCTGCTTGTCTGACTTAGTTTGAATAGTATGCTAGATTTCTAATTTATAGTCACTCAAAATTTTGATACAGTTCCATGTATTTTGACATCTAGTATTACTATTAAAAATCTAGAAAATTTATTATTTTGGCGATTAAAAAAAATTTTTTTGAATGAGGCCTGAAACTTTAATCCAGTTATGAGAATATAAAGAAATACTACGTTGTGGGGAAAAAAATACAGGAAATTAACAAGTGATACAATATTGTTTAAAGTACAAATTTTGTTCAAATTTCACAAAATTTTACACTAATGCCCATTATTTGTTTTCACACCTTATTCAAGACTCCACATTGTATTTAAATGCATTGAGCAGCTTCAGTTGCATGCAACAAATTCTGATAAATTCTCTTTTCATTTTTACTCTATTACAAATAGTTTCTAATTTTCCTTGTTCTAGCTTCTTAGGTACACCTATCATTTTAAAACTGAACATTTTATTTCCAAATACATGGGATTTTGTTTAAACTATCTTCAATATTGATTTCTCATATTGATACTAATTTCTCACTTAAATGCTTCCTTCTCTGCAATCACCCTGTATGTTTTTTTCAGTTTAACTTAACTGAGACTTTTGATGGCTAAGTCGAAGATGTCTCTTGGTAAATGTCACATTGCACTTGAAACTATGTGGGTTATTTTCAAATATCTTTTGATGTTGATTTCTAACATAATTCCACAGTGATAAGAGAACAGACTCTGTGTAATCTCAATACCTTTAGGCCAGGAAATTTTTGCACCTTGCTTTATGTCCCTGGATATGTTCCAGTTTCTGCTAGTTTACAGTCTAAGGGAATTTGAATTTGTATCCTACTCTTGTGTGAAAATTGTAAAAATCTTAATTATGCTGAATTGGTTCACAGTGCTTTTCAGGTCCACCATATTCTTCTACTTCTCTGTATATTCAGTCTATTAATTTTTGAGAGTTTGATACTGAATCTCTATGTTATTAAACTGTTGTTTAATTTTTCTCCTGTTAATCTGTCTCGTGTCAATTTAATTGTTAGACCAACCTGAAGAACTTAGAAGGGCAGAGGAAAGTTCTTCCTCCCAACACTAACTATAGTCACCATTGCTATACTTTATATCCCCAGAATTTATTTATTTTAAAACTGGAAGTTTGCAACTATTGACCACTTTTAAAGATTAAAAAGATTGAAGGCAGGAGGAGAAGGGGACAACAGAGGATGAGATGGTTGGATGGCATCACTGACTCAATGGACATGAGTTTGAGCAAGCTCCAGGAGTTGGTAATGGACAGGGAAGCCTGGCATGCTGCAGTCCATGGGGTGGCAAAGAGTCAGACACTGAGCAACTGAACTGAACTGAAAAGATTATGTGGGTGCTTTTAGCAATCTATTTTATATGTTTTTATAGTAGTTTATAAAGTGTTACGTAGTTTATATAGCTTATAAAATGTTATGATAATAGTTGTCACATTACATATTAACATAATTTTTACTTGAGAAATGAAGACTTTTTCTAACAGAAAGTAAATCTAATTTTGCTGATTAGGTTGATAATGAACTCTAGCTTAGATTTGCACTTCCCAGGTGGCGCTAGTGATAAAGAACCCACCTGCCACTGCAGGAGATGTAAGAGATGCAGGTTCCATGCCTGGGTCAGGAAGATCCCCTGGAGGAGGGCACCGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCATGGACAGAGGAGCCTCGTGAGCTATTGTCCATAGGGTCACAGAGTCAGACATGACTGAAGTGACTGAGCAAGCACGCACACTTCCCAGTACAGTAGCAACTATCCACCTGTGGCTACTGAGCTGTTTCCGTGTGACTAAGGTAACTGAGGAATTAAATTTTTAATTTTAAATGTGAAATCTAAAGCAATGTAAATTTTATGATAAAAATGTTGTTTTGAATTTAGTAATATTTAATATTCTAGCTTTTATTAGATTAAACAAGGCACCTCTAATAGAACAAAACTGGGTACAGTTGGTCCCAGACATTGATAAGTCTTGCTAACCTGCTCATAAAATGAGGAGATGAATGAATGATCATTAAGTAGCAAACCCTTTAGAAAGTCAGTGAAAGTGAAAGTCACTCAGTCATGTCTGACTCTTTGTGACCCCATGGACTC TCONS_00159236 TCONS_00159237 . 3' 132 TCONS_00159236 TCONS_00159237 . 3' 8741 EMBV3_41408 ACAGTGAGGAGGACTGGGAAGAAGTGGAAGTGAAAAGATCAAAATGGAGTTTGAGACGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06008 CTTTGCATTTGATCGCTGAGGAGTTTATCTGTCCTTGCTATTCTTTGGAACTCTGCATTC Gene BVT0102_331733 + 0 NULL GK000029.2:9681440-9706413 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15828 GGGAACTCCCAACCATTAGTCTTGCCTGTCCTTTCCTGAAGGTCCCTATTATTTGTGGGC Gene BVT0102_129814 + 0 NULL GK000013.2:67982706-68002165 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06800 AAGCCTGGGGGAGACAGGAACTGGAAGCGAAATGGCTGACTTTATCCCCAAATGTGGCTT Gene GeneID:519331|CACNG4:XM_002696227:46_cdna Constitutive 0 NULL GeneID:519331 19 GENE CACNG4 NULL calcium channel, voltage-dependent, gamma subunit 4 EMBV3_30706 GGCTGGAGTTCACAGCAATGACCACTCCGTGGTTTAGGAAAGAAACTAAGATGAGAGGCG Gene GeneID:281136|LPAR1:NM_174047:2_cdna Constitutive 0 NULL GeneID:281136 8 GENE LPAR1 EDG2 lysophosphatidic acid receptor 1 EMBV3_15518 TACTGGGGAGCCTTTTTATACTGAAACATCTGTCCTGACTTGAGTCCCCCAGGGTCCAAC Gene GeneID:613794|ABLIM3:NM_001099127:85_cdna Constitutive 0 NULL GeneID:613794 7 GENE ABLIM3 MGC148584 actin binding LIM protein family, member 3 EMBV3_37208 AGAACAAGATCTACTGTGTCCGGGATTACCACAAGGTGTTGGCCCCCAAGTGTGCAGCCT Gene GeneID:617525|LIMD1:XM_002697099:216_cdna Constitutive 0 NULL GeneID:617525 22 GENE LIMD1 NULL LIM domains containing 1 EMBV3_34871 CAAGAAGGTCTTCGCCAAGGCAGCCGTGCAGAGGGTGGTCACCGCCATGAACCAGATGGA Gene GeneID:510550|LOC510550:XM_002688454:24_cdna Constitutive 0 NULL GeneID:510550 6 GENE LOC510550 NULL similar to Uncharacterized protein KIAA1530 EMBV3_25117 AGGACTCTTCCAGTCGTGGGCACACGAAGGGCAAACAGCTGACCTATACCTATCCACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23600 TGACACTGATGCTGAAGATGATGCTCCTACAAAACGTAACTCCAGTCCTCCACCCTCTCC Gene GeneID:282641|ATP2B1:NM_174696:29_cdna Constitutive 0 NULL GeneID:282641 5 GENE ATP2B1 PMCA ATPase, Ca++ transporting, plasma membrane 1 EMBV3_02027 GTACTCCCTGACCTCACTTCTACATCACCTGATCTCTCATGCCAATATGTTTACTCTGCT Gene GeneID:507054|IL33:NM_001075297:47_cdna UTR3_Alt 2 NULL GeneID:507054 8 GENE IL33 MGC142386 interleukin 33 EMBV3_26982 GACAGTTTTGCACCACAGGACCCATGTTTCTTTTGTGATGTTTGCTTCCGAATGCTCCAC Gene GeneID:511366|SNAPC3:NM_001080258:30_cdna Constitutive 0 NULL GeneID:511366 8 GENE SNAPC3 MGC133802 small nuclear RNA activating complex, polypeptide 3, 50kDa EMBV3_25166 TCTGTCATCTGAGTGTCCACCTACATTTTGCTGCCACCAGTCACCAAAGCCCCCTTCCAA Gene GeneID:538244|ACCN2:XM_002687277:155_cdna Constitutive 0 NULL GeneID:538244 5 GENE ACCN2 NULL amiloride-sensitive cation channel 2, neuronal EMBV3_18014 GCCAGCTCCATGCCATTGCACCTTCTTTAGTCTTGATTGCTCTTCCCGCATTTATGGGTG Gene GeneID:614212|LMO4:NM_001034751:195_cdna Constitutive 2 NULL GeneID:614212 3 GENE LMO4 MGC128977 LIM domain only 4 EMBV3_16816 GTAGACACGGCCTCTATCAATACACTGAGGTGTCCTTTATCTTCTTGGAAAGCTGGCTCC Gene BVV0102_075837 + 0 NULL GK000013.2:57874973-57889706 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10032 GAAGTCTACCAACCTTGCCAAGATCTCCTTCTGGCTGTTAGAGAACGGCTTCAGTGTCCT Gene GeneID:281504|SRPR:NM_001075122:2_cdna Constitutive 0 NULL GeneID:281504 29 GENE SRPR MGC128907 signal recognition particle receptor (docking protein) EMBV3_13719 AGGTGGGGATAGTGGGCTACGGCCGCCTCGGCACCCTGACCTTGTGGTGGAAGTGGCCCA Variant GeneID:540860|ASPDH:XM_002695130:645_cdna 116^260 1 EMBV3_16617 GeneID:540860 18 GENE ASPDH JOSD2 aspartate dehydrogenase domain containing EMBV3_05556 TAGTAAATTATTGTTTGGGGGAACCATCTCCATTTGCATTGGACTAGTTAGTCTGGTCAG Gene GeneID:317777|PLA2R1:NM_175051:55_cdna UTR3_Alt 2 NULL GeneID:317777 2 GENE PLA2R1 NULL phospholipase A2 receptor 1, 180kDa EMBV3_00978 ACCAGGGGCAGAGCCAGGATCCGAAGTCAGATATAACCACCTTCCGGAATCATCTCCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38845 CCAGCCTGAAAAATTCCACCTGTGTAACTTGATGTACATTTGCTACAGCCAGCCCGGCAC Gene GeneID:617444|MGC140681:NM_001078077:7_cdna UTR3_Alt 1 NULL GeneID:617444 25 GENE MGC140681 NULL hypothetical protein LOC617444 EMBV3_02744 CAGCCATGATCTCGTTAACGGACACACAGAGGGCTTCTTTCCTGTGGTTGTTGGCTTTAT Variant GeneID:515866|GOLT1B:NM_001046215:31_cdna 143^413 2 EMBV3_36612 GeneID:515866 5 GENE GOLT1B MGC134250 golgi transport 1 homolog B (S. cerevisiae) EMBV3_29292 GACATGCAGGCCACGCTCCAAAAGAAGCAGGCTCAGCTGTCAAATCAAGGGAGAGAAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01238 CTCTGCACAGCTTTTGGGATCCTAGCTTCCTGACAAGGGATCAAACCTGTGACTGCTGCA Gene BVT0102_028711 + 0 NULL GK000016.2:56688620-56696965 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069735 TCONS_00069740 TCONS_00069734 TCONS_00069736 TCONS_00069739 TCONS_00069733 TCONS_00069741 TCONS_00069742 TCONS_00069737 TCONS_00069743 TCONS_00069738 1 XLOC_042046 NonCoding TCONS_00069736 XLOC_042046 NonCoding NonCoding LOC100848315 16:56691007-56694810 j TSS51935 657 2 TCONS_00069736_2 87 0.156773211567732 11 0.83008942661757 1.52745835020614e-17 5.39715737643749e-21 1.0454135599264e-51 3.95525421890855e-11 1.18620617661457e-08 4.09610850774449e-62 0.000187613549043041 1.48157026215173e-21 0.000470463061804472 0.00842549315215518 0.00424186964265175 0.00509810323637192 0.00094962088431531 0.00185576645272686 0.00335402992840162 0.0371755944771563 0.0192951594047556 0.0209828756601154 0.000756779435001603 9.19269054974682e-12 0 0.00789028641512799 0.0159699043786978 0.0129945279110355 5.2273170531223e-19 0 4.23262687514203e-17 0.00798003781972658 0.00432477666215111 0.0113229770332427 XR_228100.1 LOC100848315 PREDICTED: Bos taurus uncharacterized LOC100848315 (LOC100848315), 0.0 836 100.00 0.703196347031963 0 noncoding 0 0 1 1 -0.605746884685201 0.412860690534763 0.757291487683781 0.000213242344633731 ATGACGTCATGGCGCAGAATACTTATATACAGGCGCCTGGGCGCCATCTCGGTCTTTCGTGGCTGCGAGCCGGGTGTTCTCCGTTTTTGTATGCTGCTAAGAAACGCGGCAGGCATGACTCCAGTGTGGATTTTGATGGCTTCTGGTGGGCAGTTGTGTACCAGAAGGATGACAACTACTGCTGTGGTCTTAAAGCTCAAGCTTGATGCTCTATCTATGAGCAGACAGCCATTAAGCAGACTTGACTGGAAGTTGAAGAGGTGAACTTGAATCCTTGACCTGTCAAAAGCAGTTGGCCTTTTTGATGATGGCTACATGTTTTTTTCTATGGATGACTTCTTTGGGGTGTGAAGAGAGGTAGAGACTACGTCCATGCAAGGAACCAAGAGTTCTAACCAAAGGCAGATGTTTTGTTGTCCTGAAGATTTCAAGGGCATTTATGATACCAGTCAGATAGAACAGGCAGCCTGATGGATGCACATGGGATAGAAGAGCAAACAGCTATTAATTGACTGCTGCTCTGCACAGCTTTTGGGATCCTAGCTTCCTGACAAGGGATCAAACCTGTGACTGCTGCAGTGGAAGCTCAGCGCTAACCATTGGACCCCAGGAAATTCTCCAGCTTTCTATTTTAATAAATGTTTATAAATCATTCTG EMBV3_37075 TTCTGGAAAGCTACACAGAGAATTCCATCATGGTCCTGACCCAACTGATACAGCCCCAGG Gene GeneID:506157|ERP44:NM_001035032:54_cdna Constitutive 1 NULL GeneID:506157 8 GENE ERP44 MGC127458 TXNDC4 endoplasmic reticulum protein 44 EMBV3_17506 GCACGAAGATGAACACCTGCTACATCAATAGACCGAACTATATCCAGGAGGGGCCACCGA Gene GeneID:100296992|LOC100296992:XM_002696429:44_cdna Constitutive 0 NULL GeneID:100296992 20 GENE LOC100296992 NULL hypothetical protein LOC100296992 EMBV3_42330 GCATCAGAAACAAATCCCTTGTTCCTTGGGACTTGGACATCGTGGTGTCTGTGAGCAAGG Gene GeneID:616640|TTC7A:XM_002691307:426_cdna Constitutive 0 NULL GeneID:616640 11 GENE TTC7A NULL tetratricopeptide repeat domain 7A EMBV3_32224 AGCTGAGCTCGCTCCGGAACTTGTGATCTCCAACCTTGCCCTGCCCACTTGACTTCCCCA Variant GeneID:538690|ID3:NM_001014950:239_cdna 380^504 4 EMBV3_11185 GeneID:538690 2 GENE ID3 NULL inhibitor of DNA binding 3, dominant negative helix-loop-helix protein EMBV3_12670 GCCCTAGAAAAAGGCTTCACAATCAATGAATACACAATCCGTCCCCTGGGTGTCACTGGC Gene GeneID:614688|POLB:NM_001034764:97_cdna Constitutive 3 NULL GeneID:614688 27 GENE POLB MGC128623 polymerase (DNA directed), beta EMBV3_22928 CGCTGCTACATATTTGGAGGTTCTGGTGTTTGTAGGTCACTGAACAGACATTGAAATCTG Gene GeneID:527459|RICTOR:NM_001144096:36_cdna UTR3_Alt 2 NULL GeneID:527459 20 GENE RICTOR NULL RPTOR independent companion of MTOR, complex 2 EMBV3_05517 TTGATCCTCCTCCAGCATCGGCCTCAGGATGCACACCCACTTCCTGCCTCCTGAGGACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36619 AGCAACCCACAACTTCTAGTCCTCAACAGCCTGGGGAGCAGGGTTCTGAACAAAGTTTGA Gene GeneID:534126|FAM48A:NM_001046370:151_cdna Constitutive 0 NULL GeneID:534126 12 GENE FAM48A MGC129081 family with sequence similarity 48, member A EMBV3_43756 TGGTTCCAGGCTGTGAGTGGGCAGTTTTCCGATTGGCGCATCCTGGAGTAATAACTCAAA Gene GeneID:528311|ALLC:NM_001075909:8_cdna Constitutive 0 NULL GeneID:528311 8 GENE ALLC NULL allantoicase EMBV3_35680 GTCCGCATGGGCCCCGCAGGCCTAGAGTGAATTATTTAAGCTGTTCCTGGTGTTTAAAGA Gene BVV0102_203713 + 1 EMBV3_41717 GK000012.2:80724168-80773603 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041196 1 XLOC_025003 NonCoding TCONS_00041196 XLOC_025003 NonCoding NonCoding - 12:80735308-80736083 - TSS30697 775 2 TCONS_00041196_3 74 1 0 0.000245780403740253 0 0 0 0 0 7.52478635738492e-06 0.000747925869903254 0 0 0 0 0 0 3.16528789670675e-06 0.000920143130268234 0 0 1.85056351800844e-05 0 0 0 0.000426148520859323 2.16317884830817e-05 4.46997970814063e-05 0.00012727296540067 0 0 0 0 XR_236797.1 LOC101906061 PREDICTED: Bos taurus uncharacterized LOC101906061 (LOC101906061), 2e-109 399 100.00 0.283870967741935 XR_141758.1 Gm10837 PREDICTED: Mus musculus predicted gene 10837 (Gm10837), misc_RNA. 6e-47 192 76.21 0.332903225806452 0 noncoding 0 0 0 0 -0.0484110720243536 0.692545684190861 -0.0133060818361279 0.800035486846737 CATCTTCCGGGGTCCGATCTCTCCATGGAGTCCTGAGCAACCGTGGGCCCTCAACACCGGGGGTGGGGGGGACGGGGGCAAGGCGGCCAGGAGGTCTCAAGGCCACACAATGTCCGCTCCGGGCTGCCATCGGGGCCACCGTCCAGGCCGAAACCCGGGGGAGAACGTGGCCAGAGAGGGAACCGTCCGCATGGGCCCCGCAGGCCTAGAGTGAATTATTTAAGCTGTTCCTGGTGTTTAAAGAGGTTTTGCAGTTTTTAAAGAATGTTGTAAAAAAAATATCAGCCCTTGTTAACTCCCTCATTATATGCTTTTTTCCTCCCCTCAGCTGAACAAGCCATATTTCCTGAAACAGAGGAGCTATGTTAAGTGTTTAAACATGTGTCAAGTGTCTTATAAATAATGCAAATTCATAAAGAAGGGGAGGAAATTTCACTGATACCTAAAGTACTTGGCGCAGCCACGTTTCACTTGAGTTGGGTTATTTTTGGCTGCGGAATTGTAGAAAGGAAACTGTTCGGAGATGACTGGGCACCTCCTGGAGCCCTCTCCCTTTCTTAGCCTGCTCCCTTTGAGTCTGTGCTCAATCCCGTCTAGAAATGCTTTTGTCTCCTCCACGAAAGAAAGAAGTTCAGATGCTCTGCAGAGTATGTTTGGTTCAGGGTTAATACTCAATGCAGTATTTTGGAGTCACCTTTTCTGTCTTCTCCTCTCAGCCTCCTCCTATTCAAAGTTTCTGCTGCTGTAACATTTTGCTATGACACCCTCCCACCAC TCONS_00035806 . 3' 10620 TCONS_00035806 . 3' 11394 EMBV3_26071 AGATCGCGCAGCTGGCTCGGCAGTACGCGGGGCGCTACTGGGCTGAGATCTCGGATACCA Variant GeneID:538903|SIGMAR1:NM_001034655:46_cdna 231^431 2 EMBV3_35641 GeneID:538903 8 GENE SIGMAR1 OPRS1 sigma non-opioid intracellular receptor 1 EMBV3_07058 AACCCCAACTGGATGTGAAGAAGCCCTCAGAGCTGGTACTTAAAGTCAGAATTCAGAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06043 ACTGCCCTCTCACGTAAATTGGAACCTCCTCCTGTAAAGCAGATGGAGTTTTGATAACTC Gene GeneID:506231|BCAR3:NM_001024483:120_cdna Constitutive 1 NULL GeneID:506231 3 GENE BCAR3 MGC127863 breast cancer anti-estrogen resistance 3 EMBV3_32729 ATCTTAGTGCTCTGATCAGGGATCGAACCTGGGCCCCCTGCAGCAGATCCACAGTTTCAA Gene BVT0102_097528 + 0 NULL GK000009.2:97524530-97544413 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236439 TCONS_00236441 1 XLOC_144464 Coding TCONS_00236439 XLOC_144464 Coding Coding PNLDC1 9:97502863-97529358 j TSS176992 6520 1 TCONS_00236439_1 531 0.223312883435583 19 0.754623688382275 0.00526022548463443 0.00262919349482457 0.00425404505247307 0.00242092469597848 0.00374113091831004 0.00215785315504813 0.00210969939943417 0.00270274167270187 0.00464627643260786 1.51715167391263e-05 8.75842045143344e-06 1.2976657974615e-09 0.000682421779004731 0.000328715213211068 0.000654637615520622 1.24429793570814e-07 6.33524798062346e-16 8.22587997056894e-09 0.00423555088511838 0.00535941820752846 0.0013713419092622 2.4526324936127e-06 8.76000033664616e-10 6.49917325735696e-09 0.00467695644518262 0.00400932681061151 0.00259560871116726 2.52759870742587e-09 1.80280293028534e-10 2.97802319663725e-05 XM_002690375.2 PNLDC1 PREDICTED: Bos taurus poly(A)-specific ribonuclease (PARN)-like domain containing 1 (PNLDC1), transcript variant X1, mRNA. 0.0 3196 100.00 0.271625766871166 NM_001271862.1 PNLDC1 Homo sapiens poly(A)-specific ribonuclease (PARN)-like domain containing 1 (PNLDC1), transcript variant 1, mRNA. 0.0 1893 85.52 0.252914110429448 TCONS_00236439_1 sp|Q8NA58|PNDC1_HUMAN PNDC1_HUMAN Poly(A)-specific ribonuclease PARN-like domain-containing protein 1; 0.0 943 86.35 0.964218455743879 1 coding 0 0 0 0 -1.13196852092808 0.0115975964168086 -0.0611533299858141 0.24682174464777 AGCCCTTTAAGGCGCCGGCGCGGCGCTTGCGTGTAAGTGCGAGGCGACGCGTGGCCGCACTCACTGGGCGCCCTCCGCCGAGCTGCTGCGTGGCCATGGACATAGGCGCCGATGAGTTTGAGCAGAGCCTCCCTCTGCTGCAGGAGCTCGTCCTGGGTGCGGACTTCGTGGGTCTGGACATAGAGTTCACGGGCCTTCGTTCTAACCTGTCTGGGCCCCAGCAGATCAGTCTGTTTGACTTGCCATCAGAGTGGTATCTAAAGACCCGTCAGAGTGTTCAGCAGTTCACCATCTGTCAGATCGGATTGTCTGTGTTCTCCAGTATTGAAGGCGAGTCGAACAAGTATGTAGCTCATTCATGTAACTTCTTCCTCTTCCCTACGACATTTGGGGTTTTGGACTCAGAGTTCTCTTTCCAGGCTTCCAGTGTTCAGTTTTTGAACCAGTATGGCTTCGACTATAACAAGTTTCTCAAAAATGGGATCCCCTATATGAACGAAGAACAGGAGAAGAAAATTAAGCACAACATTCTGACTGGGAACTGGAAAGTTCGCAGCTCTCTGGACAAAGACCAGATCAAGGTGGTGATTGACGAGGTGACGCGCTGGCTGGACCTGGCGGAGGAAGGGGACTGGATGACCCTCCCTGGTATTGCTGGCTTCCAGGCCTTCGAGGTCCAGCTCGTACTGAGGAAGGCCCTCCCTGACATCTGGACGGTGCTGAGAGACCAAGGGGTGATTGTGAAGAAGGTGAGTACGCAGCACCGCTGGTATCTTGAGACCACCTCCTGTGATCGAGAGAGCTGCTGGAAGGAGAAGATTCTTCTCTCTGCAAGGGGCTTTTCTGTGTTTTTCCAGATGCTGGTGAAAGCCCGGAAGCCCTTAGTGGGACATAACATGATGATGGATCTGCTGCATCTCCATGAGAAGTTCTTCAGACCTCTCCCAGAAAGCTACGATGAGTTTAAGCTGAATATCCACAACCTATTTCCTGTTCTCATTGACACCAAGAATGTGACAAAGGATATCTGGAAGGAACTCAATTTCCCAAGGGTTTCAAATCTCTCAGAAGTTTATGAAGTCCTGAACAGTGACTTGAACCCCACCAAGAACTCTGGGCCAGTGATCATTCACGCCAGCAGGTGTGAGAAGTACGTGGAGACCAAGTACCCCCACGAAGCGGCATACGACGCCTTCCTGTGCGGGTCAGTTCTGTTGAAAGTGGCGCACCTGCTCCTGTGGAAGGTACACAGCGCTGTTCCCATCCCCGAGCCCAGCTTCCCGCTCTACCTGGACGTGCTGGCTCCCTACGTGAACCAGGTGAATCTTATCCGAGCCGGGGTCCCCAAAATCAACTTTGCGGGCCCAGACTCCCCTAGCATCCGCCCCCCCATCCTCATCCTCACCGTCAGGAAGTGGCCTGGGGTCAGCGAGCAGCAGGTCTACCGCGAGTTTCAGAACCTCTGCAAATTTGACGTCAGGAGGCTCACGCGGAGCCAGTTCCTGCTCATGACCAATAAGTTCAAGGACACGCGGAGCATCCTGAAGGAGTACAGGTGCCACCCGACACTGCGGATCTCCCTGTACCGCTACTGGAGACACTCCCCGGACATCAACTGCCTGCTGCAAGTCTGCAGCGTCATTACCACCTGGGCCTTCATTGCGTTTCTCCTGGGAGGAGCTGGCCTGTGAGGGCAGCGAGGCCGCCTGCAGCTCCGTCCTGTCTGCACGCGACCCCCGTAGGGCTGTTTGCCTCACATCCTCCGTGCAAGTGGATCGGTACTGTCCCCACAGGGAACTGTGTTCTGGTTTCAACGTGAAAAAGTCTGTAAATATTATCACCGATAAGTCCTTTGTTTGTGGCCCAAACGTTTCTTTCTATAAATGACTGAGGAGAAGTAACGTCTCCTGGGCGTTTAAGCTCACGTTCCAGAGCATCTTCTGAACGGACAGCTAGGCATCCAGCGGAGCTGGCCACTGAGCGAGCCAAAGGCTCTGTTATTTCTGGCAGAGAAATCATTAGCCAATCGGTTGACAGGGATTTAGGCCTTAGAAATGGCCTACGTTTTAGTAAAGGGGAAAAGTAAAGCCAAGTGTCCATGTGCACAGGTGTTGATCTGTTTTTATTTATTTTGGGGTTTCTCTTTGGGGTTTTTTGGTTTGTTTGTTTTCTGGGTCAAAAATAGTTTTTACTGAGGAGAAAAGACTCCAGCCTACAAATGTGCTACTTGTAGTTAAAATTTTATATGTTTAAGTTGTAGAATATAGTATTTCATAGGTTAGAACAGAGAACAGTTAATATCAGAATCATGGAAAATGCCATGCAGAACAAGTAAATAGGACATCGTATTGTTAGGTTTGTGTAGCTCAACTCTAGTGAGTGTAAAGGTAGGTTGATTTTCCTTATTCATCTGTTCACTGATTCAGCAAATATTTACTGAACTTCTATGATGCCTAAGATGTTAGAACGTGTCTTTTGGATGTTTATGGTAATAGTCATTTAGTTTTTGTTTTTTAATTAGGTTGCCATTTATAAAATCATACACGGCCCCTGATGTTTTGCTAAGAAGCTTCCCCTCGGATAAATAGGGGTAGAGCAGACTATGGTTTTATGGTCCATGTTTGAGATAAACATTATAAACCATAAAGCATTAATACTCACTTTGGAAACAAAGTGACCTGTAGCACAGGTGTGTGCCCCGAAACAGGTAGGATCAGATTCTTTTCTTTCCTCAGCAGTGACGTGCACGTCACTTGGCCTTATCGGGAGCTGTTCTCTGTTGGGGGTTGAACTTGGCTGGGCTGTGTGCTCAGCCTTGAACTTGACTTCATTATTCAGCAAAGCCTTGAGCTCTGTGCAAAAGAGGTTTTTTCCTCTGTAAAAGCAGAAGTGTTAAGAGATGGCAGTCACCCAGAAGAAGAGTTTGGAAGCTGCCATTCTGGAACTCCCCTGTCGTCCTGGGGTGTGAGTGACACGCTGACTGATGGGCTGCTGTCCCTACAGCCTTCCGGGCAGCTCTTGTGTTCAGACCAGTGAAAGGCTTCCCTTGGTCGGGGGAAGGGGGCTTTGTCCATCTGTCCACACAGCGTCTTAGGGGAATTTTTTTCTTTTTTTAATTTATTTGGCCGCACCAGGTCTTAACTGTGGCATGCAGGGAGTCTTAGTTGGCAGCATGTGGGATATCGTTCTCTGACCAGGGATCGAACCCAGGCACCCTGCATTGATAGCACTGAGTCTTAGCCACTGGACCACCATGGAACTCCTGGGGGATTTTGTTTTGTTTTTGTCTTCCTATTGGGTATTCCTTTGTGTATGCTGTGGAAAATTCCCACTGTTTATGGGCTTTTGGGACCCTGTCTCATGGATGTGAGCCATGCAGTCAGTAGGCAAACCTGGGAAGTGAAAACAGATTTCTCAGCTGAGCCTGTGCAGTGGCCATGTTGACCTCCTGGTGTCAGGGCGCTGAGCGCTAAGCTGTCTTAGTTCTGGAGCAAGAGACCCTGTAGTTGTTTTATCAGATGTTACCCATTTGCTCTTTAACTCTTTGTCTCTTCATAAGTTGTTGCGGAGTCCGTGCTAAGGGTGCCCTCACCAGGGCCTCTGTGCTGCAGTCAGCGTCCTGCTGTCCATCCGTCCGTGGGGACCCCGGCTGGCTGCATGGTCTGCTTTCCCTCCTGGAGGAGGCTTTGGTGGTGGGATCTGAGCTGCTCAACCCATGACCTCGATCTGCTTCTGTTTATTAACTTCCCTGAGGATTCTCCACGGGTGCCGCGCTGGAGGTGCCGAGTCCAGGAAGCGCCGTGCTTGTACCACCTCCCACCCTGTGTCCCCAGACAGAGCCTCGGGGGCTTGGGGGGCAGCTCTGGGGCTCCTGCCCCCGCTCTCTCCTCAGCTCAGCTAGTTCTTCACGTCGGTGCATCTTGTGCCGTGCCTTCCCCGTCATCAAAGGAAAGAACCAAAGTGAGAAACAGATAAAGCAGACTCTCCCCTCCAGTCTGTGTGTACATGAGTGTGTGTGTCTCACGTCTTCCATTGTTTCCCTGTCTTGGCTGCGGTGAATAATGCTGCAGGAAACGGTGGGTGTGCATATCTCTCTTTGATAGTTTGTTTTCATTTCCTTTGGATATATACCCAGAGGTGGGACTGCTGGATCATATGGTAGTTTCATTTTTAATTTTTTGAGAAACCTCGATGTCGTCCTCCATAGTGACTGAACCAGTTTACAGTCCCACCAGTCGTGCACATGGGTTGCCTTTTCCCCACAGCTTTGCCAGTACTCAACTTGCAACCTGTCGTCGTCTTGATAATAGCCATTCTTACAGATGTGAGTTTATCTCATTGTCTCATTGTGGGTTTGTTTGTTTGATTTTTTTTTTTTTTGGCTGTGCCACTGGCTTGTAGGGTCTTAGTTCACTGATCAGGGATTGAACCCAGGCCCTGGCGGTGAAAGCGCCAAGTCCTGAATCCCAACCCCTGGACTGACAAGGGGATTCTCTCATTGTGGGTGGTTTTGATTTGCATTTCTCTGACATGGCTCAGTGGTGAAGAACCCACCTGCCATGCAGAAGGTGTAGGTTCACCCCTGGGTTAGGAAAATCCTCTGGAGAAGGAAATAGCAACCCACTCCCAGTATTCTTGCCTAGGAAATCCTGTGGCCAGAAGACAGAGGTGGGCCACAGTCCACGGGGTCGCAGAGGAGTCCGTCACAACTTGGCGCCTCAGCAACAACAAACAGCAACAATTAGTGACGCTGAGCACCTCTCATGTACCTGTTGGTCATTTGAACGTCTTCATTGGAAAAATGTCTATTTGGTTTCTCTGCCTGTTTTAAAATTGGACTGTTTGTTTTTTTCTTCATTGAATTATGTCAGTTCTTTATATACTTTGGGGTGTTAACCCCTTATCTGATACAGATTTCCCCCACTCTCTGAAAGCAGAGCTTTCCTGTGAAACCTTCTGAAAGCCCCAGTGGAGCAAAGTGAAGAAGCAGTTACCTGAGGACACATGTTGCTTGTAAAATGTCCAGATGGATGGGGATAAAGCACAGATGCTCAGAGACAGTGAGGACCATAGAGTGGGGTGCCAAGGTGCTAGAGTGTAGCTCCTGGGGAAGGAGCCTGGTAACGCCAGTCTTGCTCTTGAGGTGACGCTGCCCCTAGGACGTCTTGCTGCAAAACAAATACTGAACACTGTCTCTGCTTTTTATCTTTTTCCATAAAAATGAAAAACTTGATTCCTTTCAGCTAGGAATATCAGGTACTAATGTAGGCCTTTTGAAAAAGCAAAGTGGCTTAAAACCAAAAGTGGGGGAGATCTCTCCATGGTTGTGCAGCTCTTTCTCCCATTCTGCAGGCTGCCTTTTTGTTGTGTTGATTGTCCATTTTGCAGCGCAGAAACGTTTAAATGTGATGTAGTCCCACGTGTTAATTTTTTTTTTTCCTCTTTGTGCTTTTGGTGTCATATCCTAAAATCATTGCCAAGAGCAATGTTGAGAGGCTTCCTCCTTATATTTTTCTCCTAGGAATTTGATAGTTTCAGGTCTTAGGTTTAAGTCTGAGCCCCTTCGAGTTACTTTTTGTGTGTGGTGTAAGATAAGGGGTTCATTTCATTTTTCTACTGTATTCAGTTTTCCTAACACCTTTTGTTGAGACAACCCCTTCCTCATTATATGTTCTTGGCTCCCTTAAGAAATATTAGTTGACCATATTATAAGATCTTAATTTTATCTTTATCATTCATTATAAGAACTCATGCAAGTCCTCTAGAATGTTTTATGTAATTAAGAAGGGTAAGGAACTTTCCTGGCAGTACAGTGGTTGAAACTGTGCATCTGCTGCAGGGGGCCCAGGTTCGATCCCTGATCAGAGCACTAAGATCCCGCATGGCCCCAAAAAAGGGGGAAAAAAACAAAGTAGTGAATATTTATGGATGGACATTTCTTACAATTTCGTGTCTATAGGACTTCACTGGGTACCCCCCCTTCTCCTTGCAACAATGTAACTGCTGTGGAAACAGGACGATATTAATATTCTTACAGATCAGAGCAGACAGGGGTCCCATGAGAACTGGGGATGAGAAGGCAGGGGACTAATGTACAACCAGAACTGTGGGCTTATTTGGCCACGTAGAGTCTTATTTACCTGAAGACCTGAAAACTCCACTTTCCACTCGTGGAAGAAATGAGCTAGTCTTACCTTTAAGATCGCCACATGCTAGTTTTGATCCAGATACTCTGCTTTTGTGTCTTCCAATAAATACAATGTGTGAAATTTCTAATCTGTTTTGTGCAGTATTTTGTTTAAGTCCTCTAGCATCCACATTTGCCTTGAAGATCATTCTGAACTTTTTGGTTGTTGCTGGTGTCAGCGCTCTGATCTCTACTTGACCTTTGGAACAAGTTCAAGGGCAGAGACCCACAAAGCTGAAGGAGTGGTGTGGGTGATGGCTAAATATTGTGACGTTATCTTGGGCAGAAAACAAAGGAATGTCATTAAAATCCCTTTGAGTGCTGCCTCGTAGA EMBV3_16492 GGCGGTGGCTGTGGGTACCTGGACTGAGGTTTTTAAATATATTTCTTTCTCTAACCCATC Gene GeneID:614783|DAZAP1:XM_002689174:223_cdna Constitutive 3 NULL GeneID:614783 7 GENE DAZAP1 NULL DAZ associated protein 1 EMBV3_30192 TCATCACCTGAGCTGCTCGGACCTGAGAAGAGCACAAAACGCAGGCCTAACTGAGTCTGC Gene BVV0101_058718 + 1 EMBV3_02906 GK000016.2:61928737-62068138 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00249639 TCONS_00115686 TCONS_00252353 TCONS_00007677 TCONS_00064812 TCONS_00071186 TCONS_00148672 TCONS_00250720 TCONS_00116100 TCONS_00080603 TCONS_00124846 TCONS_00010366 TCONS_00071860 TCONS_00037672 TCONS_00136620 TCONS_00153678 TCONS_00222766 TCONS_00129573 TCONS_00207069 TCONS_00129528 TCONS_00177296 TCONS_00209711 TCONS_00009933 TCONS_00218945 TCONS_00040883 TCONS_00148280 TCONS_00008224 TCONS_00011362 TCONS_00021569 TCONS_00056146 TCONS_00123620 TCONS_00109898 TCONS_00248864 TCONS_00178107 TCONS_00020400 TCONS_00039854 TCONS_00031939 TCONS_00239419 TCONS_00131137 TCONS_00238933 TCONS_00021878 TCONS_00186525 TCONS_00178417 TCONS_00062744 TCONS_00009259 TCONS_00199639 TCONS_00252226 TCONS_00233560 TCONS_00209636 TCONS_00007431 TCONS_00251707 TCONS_00130084 TCONS_00064462 TCONS_00178325 TCONS_00233372 TCONS_00161667 TCONS_00153218 TCONS_00240534 TCONS_00209032 TCONS_00140840 TCONS_00130290 TCONS_00219749 TCONS_00063080 TCONS_00207755 TCONS_00199802 TCONS_00209558 TCONS_00089010 TCONS_00238327 TCONS_00040179 TCONS_00010471 TCONS_00088088 TCONS_00157613 TCONS_00021595 TCONS_00117619 TCONS_00199424 TCONS_00064619 TCONS_00208264 TCONS_00059708 TCONS_00020345 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00116665 TCONS_00249569 TCONS_00249087 TCONS_00223554 TCONS_00211316 TCONS_00251907 TCONS_00066275 TCONS_00222114 TCONS_00107832 TCONS_00199037 TCONS_00110403 TCONS_00074566 TCONS_00019199 TCONS_00218898 TCONS_00115416 TCONS_00007359 TCONS_00111731 TCONS_00031910 TCONS_00180345 TCONS_00251929 103 XLOC_107421 XLOC_152582 XLOC_069855 XLOC_155294 XLOC_003238 XLOC_039536 XLOC_042958 XLOC_090552 XLOC_153663 XLOC_070269 XLOC_049487 XLOC_076389 XLOC_005917 XLOC_043630 XLOC_021501 XLOC_082831 XLOC_093441 XLOC_136073 XLOC_078286 XLOC_125588 XLOC_078241 XLOC_107070 XLOC_128222 XLOC_005485 XLOC_132264 XLOC_024697 XLOC_090162 XLOC_003782 XLOC_006913 XLOC_012242 XLOC_033949 XLOC_075172 XLOC_065802 XLOC_151807 XLOC_107880 XLOC_011077 XLOC_023671 XLOC_018184 XLOC_146085 XLOC_079842 XLOC_145599 XLOC_012551 XLOC_112577 XLOC_108190 XLOC_037471 XLOC_004815 XLOC_121292 XLOC_155167 XLOC_143042 XLOC_128147 XLOC_002992 XLOC_154648 XLOC_078795 XLOC_039186 XLOC_108098 XLOC_142854 XLOC_098554 XLOC_092983 XLOC_147198 XLOC_127543 XLOC_085269 XLOC_079001 XLOC_133068 XLOC_037807 XLOC_126270 XLOC_121454 XLOC_128069 XLOC_053796 XLOC_144994 XLOC_023996 XLOC_006022 XLOC_052875 XLOC_096068 XLOC_012268 XLOC_071785 XLOC_121077 XLOC_039343 XLOC_126777 XLOC_036490 XLOC_011022 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_070831 XLOC_152512 XLOC_152030 XLOC_136854 XLOC_129826 XLOC_154848 XLOC_040989 XLOC_135423 XLOC_063742 XLOC_120690 XLOC_066307 XLOC_046320 XLOC_009879 XLOC_132217 XLOC_069586 XLOC_002920 XLOC_067631 XLOC_018155 XLOC_110113 XLOC_154870 Coding TCONS_00233560 XLOC_143042 NonCoding NonCoding - 8:92837961-92838349 - TSS175064 388 1 TCONS_00233560_1 87 1.00257731958763 1 0 0 6.47449892410887e-06 1.45753048573501e-05 2.14024172268101e-05 1.06039044869753e-06 1.02436013452191e-06 0 6.24283151548598e-06 1.17319659146115e-05 8.83699995848118e-06 5.89995753792029e-06 9.61796768479136e-06 5.54631235203282e-06 4.45978395891205e-06 1.502533153669e-05 0.000192867842721031 0.0856848692931864 0.000875165884924454 9.24088388757177e-06 1.15841318822913e-06 1.30400914292684e-06 9.09073043177422e-05 6.33333360973377e-06 0.000103798968979324 0 4.8422483223872e-05 5.37684084509171e-06 1.48533757374075e-05 3.22925558412209e-05 5.89741173966195e-05 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-25 120 81.45 0.31701030927835 0 noncoding AAGCTTGTGTCGGTGTTCTGATGGGTGGAGCTGTATTTCTTCTCTTTGTTCAGTCGCGCTGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCGCAGTGCCTCAGCCACACTGGGTCTGCCCCCGCTCACGGCGCATGTAGCCTCCCTGCCCACACTGCTCGGGCTCTAGGTTGTTCTGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGTACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGAGTTTTGTGCTCTTCCCAGGTCTGAGCAGCTCAAGTGATGAGGTGTTTGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCAC TCONS_00228645 . 5' 8495 TCONS_00228645 . 5' 8495 EMBV3_14807 GACCTGTTGATCTTACTCCTGAGCAGCTTGTTATGGATACACCTGATGAAGGTCCCAAGC Gene GeneID:527075|ENAM:XM_002688339:110_cdna Constitutive 0 NULL GeneID:527075 6 GENE ENAM NULL enamelin EMBV3_23618 CCGAGAACATCCGGCTCCTGCTGGAAGGAGTCACGCAGCTGCTGCTGGCCCACGGCGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22186 TCCCAAAGAGGGAACAATTCTCACACTGTGACTGTCAGGGAAGACTGAGCACCCAGAGCT Gene BVV0102_217842 + 0 NULL GK000023.2:50323827-50327341 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135465 TCONS_00135467 TCONS_00135466 1 XLOC_081723 Coding TCONS_00135466 XLOC_081723 Coding Coding PSMG4 23:50326382-50331745 = TSS100774 1584 1 TCONS_00135466_2 184 3 0.70514733308467 3.71589569136769e-11 2.40924676897005e-11 3.22139316778787e-11 0.000164578834881833 1.00540202452129e-11 9.55756971768778e-12 1.6279009085761e-11 5.75400543672879e-06 2.48979013964663e-11 1.63280840916225e-05 7.44227167320104e-12 1.03950657477858e-11 5.43923684474341e-08 0.000331055378915267 6.99130245859362e-11 4.72692295064869e-11 6.94750921745387e-11 5.79754581727371e-11 2.48701080523333e-11 2.22951833226171e-11 9.72624372801958e-12 1.56235543683997e-11 2.03404810407527e-11 0.000205311285913449 1.96056165244736e-11 1.71854490680187e-11 7.47609802828994e-05 2.36166561121152e-11 1.49963202416589e-09 1.43935929958709e-11 XM_001255927.4 PSMG4 PREDICTED: Bos taurus proteasome (prosome, macropain) assembly chaperone 4 (PSMG4), mRNA. 0.0 910 100.00 0.317550505050505 NM_001128591.1 PSMG4 Homo sapiens proteasome (prosome, macropain) assembly chaperone 4 (PSMG4), transcript variant 2, mRNA. 5e-115 419 83.09 0.251893939393939 0 coding 0 0 0 0 0.0240149260637112 0.827821093448471 0.0140317896662473 0.822714503220554 CCACTCGGCCTTTCGGCGCTTTCCTGCTCGCGTCTGGTGGCGGCGGGAGGACTGGCGCGGCCGGGCTCCGGGCTGATGGAGCGGCCGGCGGCTGCCGGGGGCGGGGACGTGTCCCTGCACAACTTCAGCGCGCGGCTTTGGGAGCAGCTCGTCCACTTCCACGTGATGCGGCTGACGGACTCGCTCTTCCTCTGGGTGGGGGCCACGCCGCACCTGCGCAACCTCGCCGTGGCCATGTGCACGCGCTACGACTCCATCCCCCTGTCCACCGCCCTCCTCGGGGACACGTCTGACACCATGTCCACCGGTCTCGCCCAGCGCTTAGCCAGGAAGACCAGCAAGCAAGTCTTCGTCAGCTATAACCTTCCAAACACCAGCAGCAGCTTCGAGTTGCTGGTAGAAAGCCGGATCAAGGAGGAAATGCAGGCCTTTCCGGAGAAGTTCTAGCCGGAGACTCGGGCACGGGACGCTTGAATAAACGGCCAGATCCGCTGCTGCAGCAGGTCCACGTGTCCTGTCTGTCTGTAAAGGGCCGGTCTCCTCCCTCCTGTCGCCAGGGTGGAGTCCCAGGGCTGCACCTGAGGGTCCTGGGAGGAGGGCTCCCGCAGGACGTGTGAGGATGGGGGGCCGCCGGGTCCCAGAGAGGGCGCGGGCCACGACTGTCAGGCCGTCCTGCCGGCTGCATCCCCAGGGTCTCGCTCCGCTGGGCCCTGTCCCCTCACCTGGTAGGTGGGAACCTTCTCACCGGGCTGGGTTATCACCAGAAATGCTCTGCAAACCCTGGGTGCCAGGGTCCCTAGGACCTGGGTCCCGGTTTACCTGCTTTGCTGAACAGATCCCAGCATCAGTCCCTCCCCGTGCTTCCGCCAGCCCGTCTTTCCTCCTGTCTGCTCTCTCCTCCACGGCCTGGGCCCCTCCTGCCCACGTCCCCTCCGGCCCGCGTCTTAATCCTCGGGCTCTCCTGCCGCTCGCGGTGGCATCTGTCTCTCTGGGACATGTGCTGCTCTCCGGAAGCCAGCGTTCCTGGGTCGGTGGTTCCTCACTTGGCTTCCAGTCGCGTCCCTGGGGAGTTTTTACAGCTTCCTCCCCGGACTCGGGAGGCCCCCGCTTTGTGGGGCTGGAGAGCGCCCCATGTGCTTCTCAGCACAGCCAAGGCCGGCACAGGACTCTGTGACGCTTGGGGTCCACGTGGGCCCCTTTTGTCCCGGGAGGCGGTGGTTCGGGACCCGGAGCACGTTTCACGTGGCAGGTGTCGTGTCGGGCCGTTGCCTGCAGCGGAGCTGGGACAGCCGGGATGAAAGGCCCTTCCAGGGACCGGGTCCTGGGCTAAGCCACTAACCTGCGAGCCCCGGCCGGTCACGGCTTGGAGGTACGGTGGGCACCTCTCTGGGCGGAGTAGGTAACAAAATCAGGGCTATGGAGAGGAGAGTTTGGTATAAATACTTTATTAAAGAAATATTGCTTTCTTGTTAAAAAAAAAACACTACATTAAAGAGAGCTCTGGGTGCTCAGTCTTCCCTGACAGTCACAGTGTGAGAATTGTTCCCTCTTTGGGAGGCTCCAGGCCCCGGGTGAGGTCAGCAG EMBV3_41002 CTGCACCCACATTTCCTCTGCACACGTCTCCCCTTCTATACTCTTAAGCCATGACTCTAG Gene GeneID:515033|NDRG4:NM_001075695:240_cdna Constitutive 0 NULL GeneID:515033 18 GENE NDRG4 MGC140660 NDRG family member 4 EMBV3_16859 TCGGCATCCACGAGGAAATGCTGAAAGATGAGCGGAACGACTACGTGCACGCCCTGGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25885 CAACGAACTGGTCCGTACCAAGACCCTGGTGAAGAACTGTATTGTGCTTATCGACAGCAC Gene GeneID:404140|RPS8:NM_001025317:44_cdna Constitutive 0 NULL GeneID:404140 3 GENE RPS8 NULL ribosomal protein S8 EMBV3_24629 GGACCTCTTTCTCCAGGGTCACCCACTTGGCCTGTGGGACCCATCGTTCCTGGAGGTCCT Gene BVT0102_131318 + 0 NULL GK000011.2:106902707-106952347 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029502 1 XLOC_015776 Coding TCONS_00029502 XLOC_015776 Coding Coding LOC100848491 11:106879283-106946486 = TSS20509 3264 1 TCONS_00029502_7 1087 46 0.952114520401178 0 0 0 0 8.31939092073108e-05 0 0 0 0 2.52113340946187e-06 0 9.85943167424254e-06 4.39533672223062e-06 0.000327146323984941 2.2083755434286e-05 2.42753450244482e-05 0 0 0 0 1.86012725056397e-06 2.27349047147708e-05 0 0 0 0 0 2.94275821656399e-06 1.48731673485238e-06 0 XR_236599.1 LOC100848491 PREDICTED: Bos taurus collagen alpha-1(V) chain-like (LOC100848491), misc_RNA. 0.0 5323 99.40 0.918504901960784 NM_000093.4 COL5A1 Homo sapiens collagen, type V, alpha 1 (COL5A1), transcript variant 0.0 3523 86.02 0.920036764705882 TCONS_00029502_7 sp|P20908|CO5A1_HUMAN CO5A1_HUMAN Collagen alpha-1(V) chain; 0.0 988 95.44 0.907083716651334 1 coding 0 0 0 0 -0.0347815277905172 0.766335339662001 0.0372140153011362 0.484900748662346 ATGGCCGCCGGGCAGGTGCAGAAGCTCCTGGGGCCTCTGCAGAGCTTCACTGACCTGGTGGGGCAGAAACACGAAAGCCCCGGTCCCGGGGCTGTGGACATAGCCAGAGCATCTCTGTGTCCCAAGGCGCCTGGCCCAGCACCCGGGCTTGCGGCCCCGCACCAGGGGGAGCTGACCCAGCCCCCGACGGAAGCCCCTTCGGCGCCCAGCACCACCGAGGGCCCCGGGAAGGAGGAGGACCCCGGCATCGGCGACTACGACTACGTGCCCAGTGAAGACTACTACACGCCCCCGCCTTACGAGGACTTTGGCTACGGCGAAGGCATTGAGAACCCGGATGAGAACCCCGACCAGCTCCCGGACCAGGGCGCCCGGGCCGAGGTTCCCACCAGCACGGTCCTCACCTCCAACGACTCCAACCCGGCCCCGCCTCCGGAGGAGGGGATAGATGACCTGGAGGAAGAGTTCACGGAAGAAACCATCAAGAACCTGGACGAGAGCTACTATGACCCGTACTACGACCCCACCATCTCCCCATCGGAGATCGGGCCAGGCATGCCTGCCAACCAGGACACCATCTATGAGGGGATGGGAGGGCCTCGGGGCGAGAAAGGTCAAAAAGGAGAACCCGCCATCATCGAACCGGGGATGCTCCTGGAGGGGCCGCCTGGCCCCGAAGGCCCCGCGGGTCTCCCAGGACCTCCAGGAACGATGGGTCCCACAGGCCAAGTGGGTGACCCTGGAGAAAGAGGTCCCCCTGGACGCCCAGGCCTTCCTGGTGCTGACGGGCTGCCCGGCCCTCCTGGAACCATGCTTATGCTGCCTTTCCGGTTCGGAGGGGGCGGCGACGCGGGCTCCAAAGGACCCATGGTCTCCGCGCAGGAGTCCCAAGCTCAAGCCATCCTGCAACAGGCCCGGCTGGCGTTGAGGGGGCCTGCTGGCCCAATGGGTCTCACTGGGAGACCGGGTCCCATGGGCCCTCCTGGGAGCGGAGGTCTGAAGGGTGAGCCAGGAGACATGGGGCCTCAGGGTCCGCGGGGTGTGCAGGGCCCGCCTGGCCCGGCAGGAAAGCCTGGGAGAAGGGGCCGAGCCGGCAGTGATGGAGCGAGAGGGATGCCTGGGCAGACTGGCCCCAAGGGTGACCGCGGCTTCGATGGCCTGGCGGGGCTGCCGGGGGAGAAGGGCCACCGGGGCGACCCTGGCCCGTCCGGCCCACCGGGACCTCCGGGGGAAGACGGAGAAAGGGGCGACGATGGGGAAGTCGGGCCCAGAGGGCTGCCTGGGGAGCCCGGGCCGCGAGGTCTGCTGGGGCCGAAGGGGCCCCCAGGCCCCCCTGGACCGCCCGGTGTGACGGGAATGGATGGTCAACCAGGCCCAAAAGGCAACGTGGGTCCCCAGGGAGAGCCCGGCCCCCCGGGGCAGCAGGGCAACCCAGGTGCCCAGGGTCTTCCGGGCCCCCAGGGCGCTATCGGGCCTCCAGGAGAAAAGGGTCCCCTGGGCAAACCCGGCCTCCCAGGAATGCCTGGTGCTGACGGACCCCCGGGGCACCCTGGCAAAGAAGGCCCTCCAGGAGAGAAGGGAGGGCAGGGTCCTCCCGGCCCCCAGGGTCCAATCGGCTACCCAGGTCCTCGCGGAGTCAAGGGGGCAGACGGCATCCGAGGTCTGAAGGGCACCAAGGGTGAGAAGGGTGAAGATGGCTTCCCAGGCTTCAAAGGAGACATGGGCATCAAGGGCGATCGGGTGAGTGTCGGGGGCAGGGAGGGGCCCCAGGGGGAGGACGGTCCTGAAGGTCCCAAGGGGCGAGGCGGTCCGAACGGCGACCCCGGTCCTCTGGGACCCCCTGGGGAGAAGGGCAAACTCGGAGTCCCAGGACTGCCAGGCTACCCAGGAAGACAGGGGCCAAAGGGTTCTATCGGATTTCCTGGATTTCCCGGCGCCAACGGAGAAAAGGGCGGCAGGGGCACCCCTGGGAAGCCGGGACCACGGGGGCAGCGAGGCCCGACGGGCCCACGAGGTGAAAGAGGCCCACGGGGCATCACCGGCAAGCCTGGCCCCAAGGGCAACTCTGGAGGCGATGGCCCGGCCGGCCCTCCAGGTGAACGGGGACCCAACGGACCCCAAGGACCCACGGGGTTCCCTGGACCAAAGGGCCCCCCGGGGCCCCCAGGCAAGGACGGGCTCCCGGGGCACCCTGGACAGCGAGGCGAGACGGGTTTCCAAGGCAAGACCGGCCCTCCAGGCCCCCCAGGTGTGGTCGGCCCTCAGGGTCCCACCGGGGAAACTGGTCCCATGGGCGAGCGTGGCCACCCTGGGCCCCCAGGCCCCCCCGGTGAACAGGGGCTCCCGGGCCTGGCCGGGAAAGAAGGGACGAAGGGTGACCCAGGCCCCGCCGGCCTTCCTGGGAAAGACGGTCCCCCCGGGCTGCGAGGCTTCCCTGGAGACCGAGGCCTTCCTGGTCCAGTGGGGGCGCTTGGACTGAAAGGCAGTGAAGGCCCCCCCGGCCCACCAGGCCCCGCGGGATCTCCAGGCGAGAGAGGTCCAGCCGGTGCTGCTGGGCCCATTGGAATTCCAGGGAGACCCGGGCCCCAGGGGCCCCCTGGGCCAGCTGGAGAGAAAGGCGCTCCTGGCGAGAAGGGTCCACAAGGCCCAGCTGGCCGAGACGGTCTCCAGGGCCCCGTGGGGCTCCCCGGTCCCGCTGGCCCTGTGGGCCCCCCTGGAGAAGATGGAGACAAGGGAGAGATTGGGGAGCCAGGACAGAAAGGGAGCAAGGGAGACAAAGGCGAGCAGGGTCCACCAGGGCCTACAGGACCTCAAGGCCCCATCGGACAGCCAGGCCCCTCCGGAGCCGATGGCGAGCCGGGACCTCGGGGCCAGCAGGGCCTCTTTGGGCAGAAAGGCGACGAGGGTCCGAGAGGCTTCCCCGGGCCCCCGGGCCCCGTGGGGCTGCAGGGTCTGCCGGGACCTCCCGGAGAGAAGGGCGAGACAGGCGACGTGGGTCAGATGGGCCCGCCAGGTCCCCCCGGACCCCGAGGACCCTCCGGAGCTCCAGGTGCAGACGGGCCACAAGGACCCCCCGGCGGAATAGGCAACCCTGGAGCCGTGGGAGAGAAGGGTGAACCCGGCGAAGCAGGAGAGCCTGGCCTTCCCGGCGAAGGGGGCCCCCCGGGCCCCGTCGGTTTTCCCGGAGATCCCGGTCCCCCCGGAGAACCCGGCCCCGCGGTAGGTGCCCGAGAGTGCCGAGCCAGGGGTCCCTACAGCCCGTGA EMBV3_07235 GAACCAGTGTGACTTGCTCTTTGGGACCCTCGGTAACTTTTGCTGGGTGCAGAGTAGTTT Gene BVT0102_160480 + 0 NULL GK000019.2:40017503-40029604 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096833 TCONS_00096834 TCONS_00096835 TCONS_00096832 TCONS_00096836 TCONS_00096837 1 XLOC_058066 Coding TCONS_00096833 XLOC_058066 Coding Coding CWC25 19:40018232-40039180 j TSS71869 2990 2 TCONS_00096833_5 181 10 0.857736191340049 0.0074597552395761 0.00397979913021726 0.00490810590403126 0.00402688379108989 0.00593970418513078 0.0030928304534641 0.00450251446312177 0.00474434071798939 0.00394238448999808 0.00162997015856723 0.000159160482313839 9.20697942488263e-05 0.0007523900186733 0.000322935342530882 0.00138154799371711 0.000412693790448509 0.00101832180384595 0.000706450069260153 0.00631491107860135 0.00483708667018475 0.00322920285060798 0.000252820091819359 8.26323299240385e-05 0.000216282404891129 0.00484721961477492 0.00582464680160217 0.00401847187850798 7.37124612919142e-23 1.55543938910494e-10 7.37421414104564e-05 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 0.0 740 100.00 0.136789297658863 NM_017748.4 CWC25 Homo sapiens CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), transcript variant 1, mRNA. 0.0 2345 82.93 0.767558528428094 TCONS_00096833_5 sp|Q9NXE8|CWC25_HUMAN CWC25_HUMAN Pre-mRNA-splicing factor CWC25 homolog; 3e-84 259 89.44 0.988950276243094 1 coding 0 0 0 0 0.264471654759465 0.222733739044325 -0.451525803150595 0.0163220876468929 AAAGGAGGCCGGTGTGGAGGACGTGTCACGCAGATTTTGTTTTAATCTGAAGAAGAGCTGGCACCCGCAGACCCTCCGCAATGTGGAGAAAGTGTGGAAGGCTGAGCAGAAGCATGAGGCTGAGCGGAAGAAAATTGAGGAGCTTCAGCGTGAGCTGCGGGAGGAGAGGGCCCGGGAGGAGATGCAGCGCTACGCAGAGGATGTCGGGGCTGTCAAGAAAAAGGAGGAAAAATTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGTGATGAGTACTTGCTGGGGCGTCCTATTGACAAATACGTTTTTGAAAAGATGGAGGAGAAGGAGGCAGGCTGTTCTTCGGAGACAGGACTCCTCCCAGGCTCTATCTTTGCCCCGTCAGGTGCCAATTCCCTTCTGGACATGGCCAGCAAAATCCGAGAGGACCCGCTTTTCATCATCAGGAAGAAAGAGGAGGAGAAAAAAAGAGAAGTACTGAATAATCCTGTGAAAATGAAGAAAATCAAAGAATTGGTTGCAAATGAGTCTGGAAAAAAAGGAGAAGAAGAAAAAGAAGGAGAAGAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCAGGCAGCGATCGTTGCAGCAGCGAGGACGAGCGCAGCAGGGGGAGATCTCAAAAGAAGATGGCAAATTCTCCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTAAGGAGTCAGGAACTCCGACCATAGCCAGGGCCTGCAGGGTTCTCTGATGGCCGAACGAAAGGGAGCGCATGGGTTGAAAAATTATTCCAGGTCCAGGAGCTCCTCTTCCTCACCTCCCAGACATACCAGCAAGAAGAGCACCAGGGAAGCAGGGTCCCGGGATAGGAGGTCCCGATCCCCTTGCAGAAGGTCTCGGTCCCCAAGGCCAAGCAAACCGCACAACTCTAAGGGAAATAGGAAAGACAGAGGCCGAAGTAAGAGCCCGTCTCCTAAAAAGGAGGTTTACCAAAGGCGGCATGCTCCTGGGTACACCAGAAAGCTCTCATCAGAGGAGCTGGAGCGAAAAAGGCAAGAGATGATGGAAAACGCCAAGTGGCGGGAGGAAGAGAGGCTGAACATCCTCAAGAGGCATGCCAAGGATGACGAGCGGGAGCAGAGGCTGGAGAAGCTAGACTCCCGGGATGGGAAGTTTATCCACCGCATGAAGCTAGAGAGCGCATCTACCTCCTCTCTGGAAGATCGGGTGAAGCGAAATATTTACTCTCTCCAGAGAACCTCAGTAGCTCTGGAGAAGAACTTTATGAAAAGATGAAAGCCATCCCCTCTCTTGCTGGTTTTCCTGAAATTTCCAGGGAGGCTGCTGATCCCTTAAAAATTCTCTTTATAAGAGTTCAAACGGCTTCTTTCACAGATGTCAAACCACCACTGTTCAAAGTGACTTTCCTTCATGGATTCCAGAAACAGCTCAGTTCTTTTGAGAACCAGTGTGACTTGCTCTATGGGACCCTCGGTAACTTTTGCTGGGTGCAGAGTAGTTTTTTCAATGGGTAGGCATTGGAACATCTAGGTGTGAGCACTCATCTTGCTCTGGAGGGAGCCTCCCTATGCCTCTTCCCTCCACCTGTGTGAACAGACTTAACTCTACCACCTCAGAATAGACTGGACCTTTCAGAAACCTCTCCCCTCTGAATCACCCAGAAAGATTGTTCTTACCAAGGTAAATGAATACTTAACTTGATTTAGTAGATGATGTGACAGAATGATGTCAGATTAGGGCAGAGCCAAGGCAGTGACAAAGAATCTGGAAGGGAAAACAATGCAAAAAAAAAAAAAAAAAACCCTAAATGAACTGTTTAACTATTTGAACTATCAAACTGTAAAATATAGTGTGTGCATATGTATAAATTATAATTTTTACATTCTTTTGGAAAAAAAGAAGTTAGCTTTGTGAGAATATCTTGTTTGATAAGTGACTTTACTATGTAATAGAACCTCATTGAATCTTGTTATCCAGTAACACAGTAAGGCAGATTAGCTTTTCTTTCCTCTGCAAATCTGGCGGATTTTGGAGGGGCCCAGGGTTTATTGATAGGATCTAGGGTATCTGTCCTTTTTACACTGCTTATAGTCTCTGATGTGTGGGCAGTGCAGAAATGAAGTCAAATCATTTTAGGAGTCAGGACCAAACTATCAGTTTGCACCCTGGCTCTTAAAAGAAAGTATAGTGGAAGCTGTTTATTTCATGCCTTCCCTTTTATCATGTAGTAATCTTATTACAAGTCTAGGTTTTCAGGAGTTGTTTGGTATTATTTTTTAGTCAGGATTAAAAACAAAACAAAACAAAAAAACCCCCAAACTCATAGGATCAATCTCCTGTCTTCATCCCTTTCCTGTCTCCTACCAGAAGTTCTCATTTGACTCAGGAGTCCTAGGCACTCTTGATCCACACATTAGCTGGGCTAGTTCCTTGTTCTGCTAATTCCTAATTCTTAAACGAATTTGGATTTATGTTTTTTGAGCACTTATGCTGCCGGACACTGTTATGCTTAAAACCCAGTCTTTCCCCAGAGAGAAAGTAACATACACTTGTTATTCAATTTAACACCTTATCCTGCTTCCCTATACTAGGGTTAATTATGTCTTTTATTACTTGGTAATAAAAACTACATTTATTTTTGTAACTGTGTAAAGAGCCACCTGTGCTGAGTACCGAATTCCTATACACAACAATGTTGATCCACGATTTGTGTTCAACATAAAACATAATTCCGAGAGGAATTATGAAGAAAGCGTGGGCAGTTTACTGAAAGATTTCACCGAGTGAGCCAGAGAGTAAGACGATTATAATTCCCTGTCGCATGATAAGTGTCTTAAGGTGCCGGCCTGCCCCTGAACTGGACGCTTTGGCCGGAGGCCGGCCACCGGTGGGTGAGAGAGGGACTCATTCATAAAACCCGAGGCTTCCAGCTGGCTCCTCTCATTGGCCCTGGG EMBV3_33106 CCCCCGCTCTCCAAGTCCAACCTCCGATCTACTCTGGCGCTGAAATGGATTAATAAGGAA Gene GeneID:100337441|LOC100337441:XM_002692216:1434_cdna Constitutive 0 NULL GeneID:100337441 13 GENE LOC100337441 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_19491 CACTGTGTACCCTCTGCCTAATTGCATTTGTGTTCTGGAGTTTCAGTGGGGTGCAGGGAA Gene GeneID:515964|RRN3:XM_002698032:241_cdna Constitutive 0 NULL GeneID:515964 25 GENE RRN3 NULL RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) EMBV3_26023 GTAGCGGGAAAGCTGGTTCACTCCAAGAAGACCAGTAATCGTGGCCCAGCCCCTCTCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25792 TCATGAAGCGGTGCTTTCTGGAAACCTTGAGTGTGTGAAGCTGCTAGTCAAATACGGGGC Gene GeneID:616223|LOC616223:XM_002696113:202_cdna Constitutive 0 NULL GeneID:616223 19 GENE LOC616223 NULL similar to dysferlin interacting protein 1 EMBV3_36804 CGGTTTGCCACTTCCCTCAGCAACTGGGAGACAACATTTCCCCTTTTTCCGGACGGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43540 GGTGGGAAGGGCTAGATTAAGAGTCTGGAGTTAGCAGAGGCAAACTAATATATAGGATGG Gene BVT0102_105644 + 0 NULL GK000003.2:30676242-30743946 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169409 TCONS_00169408 TCONS_00169410 1 XLOC_103356 NonCoding TCONS_00169409 XLOC_103356 NonCoding NonCoding - 3:30685051-30690273 - TSS126852 3729 4 TCONS_00169409_9 89 0.415124698310539 3 0.286343612334802 2.22781578763078e-05 4.70177229096272e-05 1.06871731474636e-05 2.12362469422662e-17 4.41499053142373e-11 1.55095853022672e-08 4.4183988292103e-11 6.97598193726712e-05 0.000152808194892698 6.77781357483348e-26 1.36404621114789e-38 8.37039131447164e-16 6.50930332916615e-23 3.17338885159506e-26 7.40063219001007e-05 0.00280354629663822 0.000252730012616902 0.00393521231677725 2.84714040307458e-10 3.50645999783299e-10 1.55941859449943e-10 0.000317446885936248 0.000531444546019613 0.000891944636355443 5.72418466739308e-10 7.6104543696766e-13 3.50728882499739e-05 1.39126089315762e-05 6.19612318996966e-06 2.0010879643339e-05 XR_233949.1 LOC101902404 PREDICTED: Bos taurus uncharacterized LOC101902404 (LOC101902404), 0.0 2024 100.00 0.300616787342451 0 noncoding 1 1 1 1 -0.00915688364553974 0.93970816673726 0.0499226150884426 0.631909375084082 TAACCATCTTGTCAGGATCTGGAGGCCAGGTTCTCTTATAAAACCAGAGAGAGAAGAGGTGAGGAATTAAAAATAAAAAAGCAGGACAGACAGGGAGAGGCAGTGAGGACGTGGAGGAAAAAGAGGCGCGTCTCGCAAAACATCTCTGGGATGGCCAGCCTGTGGAAGGGATGTGTTAATCTCTTCTTTCTTGCAACATTTTACAGGTGGGCAGGGTCAGATAATCTCTCTGTGAGTTGAGTGAAGGCACTTTAACAGTCCGGCAGACAGGCAGGGTTCTCTGAGGTGGGCCATTATGTGTGATTCTAAGAGCAAAGGCAATGAAAATCAAGTCAAAGAAACAGTTCCCACCTGGAGTCAGAACCGACTCTTCCCTGCAACTGTTATGACCCCATGTCTGTGCTGATCCACATGAACTTCGGGAAAATGCAATGGCGCAGCCCCTGCTTCCTGGATTGTGGCTTCTTATTTACATCACCACAGCAAGTGATTACAGGCTTACCTCTTCCATTTAGGGCTGTGCTTTTTCTGGCTGCCCTTGACACCTGGCCGCTCTCAGGCTCCTGGCTCAGCCAGGCTCTGGACAGGGCTGTGTATTTATTGGATGGGAGACCTGGATGAGAGACCATCTGCATGTTTGTGAGGCAAAAAGATGATTTCAGAGAGGCAGCCTTAGTGGTGGTGTGAAGCAAGATCTTGATTTCCTGCCCAGGAAATGAACCTGGGTAGCCTTGATGAATCCTATTCACCAGACCAGCAAGGGCTAGGGGCTAGAAGCTAATTTTCCTTGGATCTTGCCCCCAGTGAAACCTGCATTTCTCAATGGAGGCAAGGACTGTAAATGCAAGTACAAAGTTTATTATTAGATATAGAAAGCAACAAGTGGGACTGAAGGAGGAAACAGAAAGAGCTGGACTCCATCTTAGGCCAGGTTGCGAACATTAGGCTACACGCATGGTCACCCTCCCAGTGGACTCTGAACTTTGTGTCCAGTGTCTATAGAGATAGCATACCAATGGAAAACCAGACCCCCAGATAAAATAGCCTCAGGACTTGCACTTGGACTCTCCGTTGTCTAAAAGAATATGCTAATTATCTCTGTAACAGAACAAAGTGGTAAATTCCATTATGTTTATCAGGATATGACCACAGGCCTATTGATAAATATCCACTGTTTATCTAGTCATGTAACACATGAATCATGGGTTAACTTTGATCGTATCTCTCTTTTACCTTGTCCAGACTAGTTTCAAGGAATTTGGGGAGGTGGGTTTGAGTAAGGACACTTAGGGTATATAAGGTTTTCACAAAAACTGGTCGGGGTCCTTGGCTAAGAGGAGACTCTGCCTTGAGCCCTCCAGCGTAATAAACACTCCACTATCTGCATTGTCCTTCTGAGTGAGTTTGTTTCCCAGAACTCATGGCTACAACATTTGGTGCATGGGCCGGGAAACTCCTCACTTTGAAGAAATAAGTCCCATTTGGGGCTACTCCGAGGCCTTGCAGCTTGAATCTTCTAGAGTGGGGAAGGTGCCTTGCCTTTCTGGAAGGATTCTGCTTCTCAACGCCCAGACCTTTCATGTTAGCAGCCCACCAAGACAGAACAGACTTTAAGGGAGAAACAGTGTTGGACCACGTGGTGTTCTGGTTTGGCCTTGCTGACCGGCAGGTGAAGACACACGGATCCCCCTTCGTCCTCTGGGATCTGGCAGGATTTGGACGAGGATGACCTGCCCCTCCCCCATACTGGATGATGACGCACCCTCCGGCCCAGTGCTCCACCAGGACCAGAGGCTGCCTTAATGCCCAATCCAGGGCCAGGTGAAGTTCCTGCAGCAGCCATTCCTCCTCCACCAGCTCTCCTGGAGGTCTTAGAGCCGCCACCTCAGCAGGCTCCATCCTGGTGGCAGAAGCCTCTGGCCAGCACTTCCAGGATCTGGCTCCAGCCGAACCGCCCAAGCTATACCCACCTCTCCCGATCTCAAGGACGTCTTCTTCTGCATACACCTTGTCCCAGCATCACAGCCCATCTTTGCCTTTGAATGGGAAGATCCAGTCGGGGGCATCAAACAACAGCTCACCTGGACTCCCCCACAAGGGTTTAAGAATTCCCCAACCATCTTTGGGGAAGCCTTGGCTTCTGACCTGGACTCATTCCACCCGGAAAAGTACAGATGTTGGCTCCTACAATACATGGATGACCTGCTGCTGGTTGCCGAGACCAGGGAAAAATGCTGGAAAGGGACAAAAGCACTGCTCCAGCTGCTGATGGAAGCAGGTTACTGGGTGTCGAAGAAGAAGGCACAGATCTGCAAAGAGTTAAAGTTACAGGTATTGCCCCTTGGATCCATCATACGAGGATGAAGAGAGCATACCACGCAGACCCAGAAAACGCTGAGTGGACTGCACAGAGGGACCCCGCTGACCCTCGAGAGACTAAGACCATCCTTAAGAAGAAGGAAAAGAAGATCCCGGAGCCCCTTGAGGATGAAGCCACATAAACAACTCCTGCTGCTTGGTCTCATCAACATGCACATTCCTACGCCAACTTCCACAATTCCTCCAACTGTTGGGTATGTGGGGCTATGCCTCTGTCTGTGATGGATGGACTTCCCTGGTGGCTGTCACCGCTCTGCCAAGGAGATTTTAAACCACTCTGCTCTTTTCTGGGACATAATCATAATCTCTCCCTGCTCTCTGGGTGTAAGCCAGACCTACAGTCAATAGACTCGGGTCATAGGGTTACATTTGATATAAATGCCAGTGTAACAAAAGCCTAACCTACAACAAGCCCTGGTAAATCTACCTTATTTACATGCTAGGTGGACAAGATCTGTGTTTCAATGGTATTAGTATATTGCTGCCTTATTCCTACCCTCTATAGGGACAACCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAAGAGTCAGACACGACTGAGCGACTTCCCTTTCACTTTTCACTTGCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGCAGAGCCGGGTGGGCTGCCGTCTCTGGGGTCACACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCCTGGGTATTTATAGGCTGTCTGCTACCTCAAAGGTATGAGTGAACACAGAGCATCCCAGAGCCTGGGCCTAAACAACAGTAAATAGATAGACAGCAAAGGTTTATTCTCTGGATAATACTCAACCATAAAAAAGAATGAAATAATGCCATTTGCATCAGTATGGATGGACCTAGAGATGATCATACTAAGTGAATAAGAAAGAGAAAGACAAATATCATAAGATATCACTTATATGTGGCATCAAAATATGATACAAATGAACTTATCTATAAAACAAAAACAGACTCGCAGACTTGGAGAACAGACTTGTGGTTGCCAAGTGGGGTGGGGAAGGGCTAGATTAAGAGTCTGGAGTTAGCAGAGGCAAACTAATATATAGGATGGATAAACAACAAAGTCCTATTGTCCACCAAAGGGAGCTATATTCAAACCTGTGATAAACTACAATGGAAAAGAATGTGAAAAAGGATGTGTGTGTGTGTATATATATGTATAATTAAATCACTTTGCTGTACAGCATAATACAACATTGTAAATCTACTATACTTCAATAAAATTAAAAAA TCONS_00169406 s 3' 7659 TCONS_00169406 s 3' 7659 EMBV3_17128 ATTCAGGAATTAAGTGGAGCAGCAAACTCCTCCCTGGGACTGAGGAATGTATGCATTTCC Gene GeneID:512070|ACAD8:NM_001075551:5_cdna Constitutive 0 NULL GeneID:512070 15 GENE ACAD8 NULL acyl-Coenzyme A dehydrogenase family, member 8 EMBV3_22905 GGATCTTCAGGCCCCAGGTTCAAGGCCAAAAGGCCCAGAATCCAAAGCTTGTCTTGGAAA Gene GeneID:445543|JUP:NM_001004024:61_cdna Constitutive 0 NULL GeneID:445543 19 GENE JUP MGC137835 junction plakoglobin EMBV3_17002 GTCACGGGGAACGCCAAAAAGCTGGAGGAGAAAGTGGTTTCTGGAGAAGTTAAAGCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06093 TGACTGCTCTGGTGGACTCTTACATGAAGCATCAGGGTCTGAACGGGAACATGAACCTGG Gene GeneID:529006|ZFP91:XM_002693769:25_cdna Constitutive 0 NULL GeneID:529006 15 GENE ZFP91 CNTF zinc finger protein 91 homolog (mouse) EMBV3_04910 CCCTGAGGGGGTTTTCTCCAAGGAGCACGCTCTGCATATTGTGCATGCAGTCTGTTTTAA Gene BVV0102_416428 + 0 NULL GK000025.2:27560810-27602221 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241066 TCONS_00011558 TCONS_00066405 TCONS_00185571 TCONS_00173130 TCONS_00122090 TCONS_00034472 TCONS_00156863 8 XLOC_147730 XLOC_007109 XLOC_041119 XLOC_111624 XLOC_104301 XLOC_073646 XLOC_020687 XLOC_095323 Coding TCONS_00241066 XLOC_147730 NonCoding NonCoding - 9:59411083-59412679 - TSS180744 1596 2 TCONS_00241066_3 52 1 0 3.83618306476266e-06 0 0 5.20310846526627e-07 0 0 0 0 0 0.000371602900397673 0.000357601974581728 0.000119595869008014 5.78238343294847e-05 6.3436643798457e-05 0.000423366625732826 0.0434995119042029 0.00915912048134125 0.0335503791342459 0 0 0 0.0119063293741613 0.0103354717804554 0.0203104914748732 0 0 2.62224429621199e-07 0.0015197245229825 0.0010367077463294 0.00443118164624402 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 2e-70 271 86.70 0.143483709273183 0 noncoding ACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGGGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAAAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACATCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGCAGAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAGAAAAATAAAAAGAAAAAAGGAAAAAGTGAAAAAGAAAAAAGGAAAGAAAATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGATCGGAGGAGGAAGGAATCAGGGAATGCAGCAAGATAGAAAAAGAAAAAAAAAAGGAAGTTAGAAAAAGAGACACAGAGAGAAAGAGAAGGAGGAGGAAAGAAAAAGTTAGAGAGAAAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAGAAGAGAAGAGGAAGGAAAAAAGATAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGGAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTTACAAGACACTGTGGCCAGACGCCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCACCTTCCAGGGCCCAAGAGTTCCCCACTTGGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAACAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCCTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAGCCCAATGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTCGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAATAAATAAATAAATAAATGAAAGAGAAAGAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACA TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 EMBV3_06688 TGAAGGTGTTAAAAAAAGCTTCTTTAAAAGGTTCTGTTTACAGAGGAAGATGTGAAATTC Variant GeneID:526227|RPS6KA6:XM_002699935:88_cdna 338^498 1 EMBV3_07789 GeneID:526227 X GENE RPS6KA6 NULL ribosomal protein S6 kinase, 90kDa, polypeptide 6 EMBV3_33364 CAGCTATCAATCAAAGCGGAAGACCTTCATTCTTGTCTACGAGGTGCCTGTGTCAGACCC Gene GeneID:523144|CST11:XM_002692172:85_cdna Constitutive 0 NULL GeneID:523144 13 GENE CST11 NULL cystatin 11 EMBV3_23050 TGCTTCCGCTAACGCTCTCGTCCCCACACCAAGCCAAACAACAAGGAAACGCACATAACT Gene GeneID:280968|TPPP:NM_173976:8_cdna Constitutive 0 NULL GeneID:280968 20 GENE TPPP p25 tubulin polymerization promoting protein EMBV3_12295 ATCGCGCTTGTCCAGCCTACCTACTACCCTCGACCCAGCTGAATACGACATATCTTCTGA Gene GeneID:327706|NDUFB4:NM_175822:17_cdna Constitutive 0 NULL GeneID:327706 1 GENE NDUFB4 B15 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa EMBV3_07742 ACATCCCCCGCAACCTGAGCTTCATCGCCTCACTGACAGAGCGCGCCTACTACCTCAGCC Gene GeneID:527187|LOC527187:XM_002690446:308_cdna Constitutive 0 NULL GeneID:527187 10 GENE LOC527187 NULL similar to FLJ00089 protein EMBV3_04056 ACTTGTGAAACTTGTCAAGAATTAGGGCAGCCAAGTTAGAAATTCCTATGTGCCAATCTC Gene GeneID:511661|SLC6A14:NM_001098461:2_cdna UTR3_Alt 2 NULL GeneID:511661 X GENE SLC6A14 MGC151531 solute carrier family 6 (amino acid transporter), member 14 EMBV3_03706 TTATTTGGCAGACTCGGATAGAGAGAAGAACAGATTAAGTGCCAGGTGAAAGCTCCCAAC Gene BVT0101_020824 + 0 NULL GK000010.2:59813163-59833269 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014246 TCONS_00014245 TCONS_00014243 TCONS_00014244 TCONS_00014242 TCONS_00014247 1 XLOC_008270 Coding TCONS_00014246 XLOC_008270 Coding Coding SPPL2A 10:59757206-59816703 j TSS10346 5812 1 TCONS_00014246_3 676 0.069511355815554 17 0.902598494016404 8.08882875354565e-05 5.20127709504269e-29 1.47021217554693e-08 1.15205757912657e-05 3.25769536166893e-10 1.86181121132882e-05 6.7061514836191e-10 4.6959534451403e-10 2.00925686224537e-05 2.52114131545239e-12 4.86070386517796e-14 1.0285553367266e-05 3.31481134402692e-13 9.25455586619646e-11 6.03962779848763e-13 0.00119603611387003 0.00165858916605448 0.000802198024028498 5.83064376467116e-05 7.46319577551326e-09 1.74574158807975e-06 1.46532942446773e-11 0.000827017320415489 0.00114573745578895 7.54267212909134e-05 5.27723577319604e-13 1.11422982398372e-05 3.11668625124634e-05 2.91552871573392e-05 5.73252597769207e-27 XM_608794.7 SPPL2A PREDICTED: Bos taurus signal peptide peptidase like 2A (SPPL2A), 0.0 7571 99.95 0.722986923606332 XM_005254722.1 SPPL2A PREDICTED: Homo sapiens signal peptide peptidase like 2A (SPPL2A), 0.0 2686 89.07 0.351686166551961 TCONS_00014246_3 sp|Q8TCT8|SPP2A_HUMAN SPP2A_HUMAN Signal peptide peptidase-like 2A; 0.0 895 85.79 0.798816568047337 2 noncoding 0 0 0 0 -0.113181257508683 0.475389805715824 -0.00795108004146319 0.869530130910009 ATGGCTTACTGGGGAAGAGAACAGACGCTCCGCAGCTTCAAGGAAGAAGGCCTTGAAAAAGTCCCTTCGCCTGCCCGGACTTGGGGACAGTTCAGGTCAGGCAGCTGGATAGAGACACGCCCAGACACTCCGCTTGTGCCCGCCAGCGTCGGGAAGCTCCGAGAGCCTGGCGGGAGGCGCGCGCCGCCCCGGACTCCACATGGCTCGTGGGGGTTTCCGCGTCCTCCGGGCGGGGCCGGAAGAGGAAGTCGGCGCTGCAGCGGCGGCTCCAGCAGCCGCGGCGGCCCCACTCAAGGTCCGCGGTCCGACCCTGTCCCGCCCGGCCACCGAGGCAGCGCCGCGACGGGATCCGGAGCCTGCCCCGTTGAGCCTCGACGCGCCGCCCGGCGCCTACCCGTCAGTTCGATGGGTCGGCAGTCGCCGCTGCCCCCCGCCGCGGCCGCCCTGCTCTTGTGTTTCCTGCTCCCTCTGACAGCTGCTCACGAAGCAATCCTCCATGCCTCTGGAAATGGCAGGCCTTCACCATCTAAGGACTACTGCATGCTATATAACCCTCACTGGACATCTCTTCCAAGTACCCTAGAAAATGCAACTTCCATGAGTTTGATGAATCTGACTACCACCCCACTCTGCAACGTTTCTGATATTCCTCCTGATGGAATAAAGAACAAAGCAGTTGTGGTACAGTGGGGAACCTGCCATTTTCTTGAAAAAGCCAAAATTGCACAAACAGGAGGTGCTGAAGCTTTGTTGGTTGCCAATAATAGTGTCCTATTTCCTCCCTCAGGGAACAAATCTGAATTTCTTGATGTGAAAATATTGATTGCATTTATAAACCACAAAGACTTTAAAGATATGAAGCAGACTCTCGGAGATAACATTATGGTGAAAATGTATTCTCCATCGTGGCCTAACTTTGACTATACTATGGTGGTTATTTTTGTAATTGCTGTATTCACTGTGGCATTAGGAGGATACTGGAGCGGGCTAATTGAATTGGAAAACATGAAGGCAATGACAAACACTGAAGATAGAGAAATGAGGAAAAAGAAGGAAGAATACTTTACTTTTAGTCCTCTAACAGTTATAATATTTGTGGTCATCTGCTGTATTATGATGGTCTTACTTTATTTCTTCTACAAATGGTTGGTTTATGTTATGATAGCAATTTTCTGCATAGCATCAGCGATGAGTCTGTACAACTGTCTTGCTGCACTAGTTCGTAAGATACCATGTGGACAATGCACGATTACCTGTCGTGGCAAGAGCATTGAAGTGAGACTTATTTTTCTCTCTGGATTGTGCATAGCAGTAGCTGTTGTTTGGGCTGTATTTCGAAATGAAGATAGGTGGGCTTGGATTTTACAGGATATCTTGGGGATTGCTTTCTGTCTGAATTTAATTAAAACACTGAAGTTACCCAACTTCAAGTCATGTGTGATACTTCTAGGCCTTCTCCTCCTCTATGATGTATTTTTTGTTTTCATAACACCATTCATCACAAAGAATGGTGAGAGTATCATGGTTGAACTTGCAGCTGGACCTTTTGGAAATAATGAAAAGAATGATGGAAACTTGGTGGAAGCCACTGCTCAACCATCAGCTCCCCATGAGAAATTACCAGTAGTCATCAGGGTACCAAAACTGGCCTATTTCTCAGTAATGAGTGTCTGTCTCATGCCAGTTTCAATACTGGGTTTTGGAGACATCATTGTACCAGGCCTGTTGATTGCATACTGTAGAAGATTTGATGTTGAGATTGGCTCTTCTGTATACTATGTTTCCTCCACAATTGCCTATGCCATTGGCATGATTCTTACATTTGTTGTTCTGGTGCTGATGAAAAAGGGGCAACCTGCTCTCCTCTATTTAGTACCTTGCACACTTATTACTGCCTCACTTGTTGCCTGGAGACGTAAGGAAATGAAAAAGTTCTGGAAAGGTAGCAGCTATCAGATGATGGACCATCTGGACTATGCAACAAATGAAGAAAACCCTGGGACTGCTGGTGAACAGATTGTCCAACAATAATATCATGTGGATGTGCAATAATGTGTCGATTGATTTTCTACAAATTAAGAGTTTGACTTTTTAAATTGACTTTTGAATTGACAATCTGAAAGAAACTTCAACGATATGCTTGCAAATATGTATCTATAAGAGCTGGTACTGACAGTTAATTACATGATAAATAATTAAAATACAGTTGCTTTTAACTATGTTAAAGTTGTGCCTTCACATTAAATAAAAGCATATGGTCTGTGTAATTTTCAGGATGTATTATATATAGTATATTTTTATAAGAAAAAAAAAACTCTTCACCTACCCCTATACTTGTCTTATTGAAGTCTGTTTCTTTCAACTCTAATGATAGATAAAAGTATTTGTCAAAGTGAGTTTCTGAGCAGATTTTACTGTAAAGAATTATGCAAACTTTTTGCTCTATAGAACTGTTTAAGATCATTTAAGAAGGCAGTTCAGCAGTGGAATTTTGGACCTTTTATCACTGCAGAGGTTAGAAATATATGATTTGGGAATATAGATAAAAGTGTATTTTTGTAGCATAAGTTTTAAAAAATCCCAATCCTTTTTTAAACTTGAGAACCTAAATTACTTCAGATTGCATATGTGTTATATTAGAATATTTTTCCATTTATAGAGAAACATATAAAACTAGTCATTTGAAAGGAAACAAAAATTGAAATCCACATTTTTCAGTGGTCTTCTGTTTCCTTGAAGATGTAGCTTAAATTTCTAAACTAACCTATAATTCCACTATGGTATTTCTGATCTCTGAAGTTTGGATCTACTAATGTTAAGATTAAGACTTAATATTTTGTAAAAATTATTTTTCTTAGCAAATTATATATTAATACATATGACTTATTGTTTGAGTATTAACATCTCTAATAATCCCTTCCTCTACCTTCCCTCCCCTAATTCCTACTCCTTTCCCCATAGGCGACCACTGTTAGCTTTTTAAAATTTGGGTGAAGCATGGTTTACTAATATACAAACTGTGCTTCAGAGGAAAGAATTGGAGACAGAAAACAGGATACTGGGTGTTAGTCTCAATTTAATTACAAAGTTTGAGTAAATTTTATTAGCTCAATGCAATTGTATCTCAGTTTTCTCATCTGCAAAATGAGTATGTTAGACCAAGTAATCACTCTGGTTCCTTCCAACTTGAAAAAATTTTCTCATTCTTTGTTCAGTCTCATATGTGAACTTGAACATTATCCTGTGAGTCATAGGTCACATTGTCTATTTTCTTTTCTTTTGAAGAAATCTCCAAGTGAAACATGATTGCAAAGACAGCAAGATTTTGTATTTCTGTAAATAATGTATAAGATATGTGAACACATCTACGATTTTTCATTGTAAGGCCAGTTTTACTGATTAAAAGATAAAGCTAACACCTTTCAAAAATGTTTCAAACCTTTGATGTTTGATCTAAATTTAGCATTTGAGGGAATTAGATACTTTTGATTCATTGATATCTTCCCAGATTGTTAAGTTACTGAGTAATTTACAGATGTAGAAGCTCCCTTGAGAGCCCTTCTTTCTACTTAATAGACTTATGGGTCACTTGGTTTATGGCAAATGACAAATAAGTATCTGACAAGTAAGAGTTCATGTTGATTTTGCCTCCATAATATCAAGTTTGAATTTTTTCCAAAGAATCTAATTTATTTGGCAGACTCGGATAGAGAGAAGAACAGATTAAGTGCCAGGTGAAAGCTCCCAACTATATTTTCATTTATAATATCAATAAAATGTTTGCCAAAATACAGCTTTTTTAAGTAAAGTTATCTGCACTCTTATTCCAGCTTTAGGATATTCAAAAACTTCGACCACATTTTGTGAAGAATGTTACAGAAAATTTTATACCTAGAAATCTGGAATTTTAGTTCTTTGATACAAATTCTACTTTATCCAACCACTAGTAAGAAGGTAAAATCTTGTTCTAGTTTGGTATTTAAATCTTACTGATTAAATAGAAAAAACAAAAAGTGAAATTCCTTGAGTTTCTCTGTCTTCAGTATCAACTTTGTATTACTTAATCCTTTCTAGCAACTGAACTGAAAATATTTATAAAAATTACAGTAAAGTGCAGAAATATTTTATTTGGGAAATCAAAGTATGAACAGAAGATAGGAAAGATGAAACTTTGCCTTTAGAAGACTATCATTTCTTTCTCAAACTGTAAAAGTAGATGATTTTTACTTCAGTTCAGCAAAGGTAAATATGAGTTTTCTGGGAAAGGACTTTGATAATCTGCTACATTGTTTTCTTCTAGCTTGTAGATTTTTTTTAGATTAGCAATATCTTATTAGTAGACTCAGCAATTTATTTTTCTTTTGAAGGAAGAGTTTTAGCCATTCTGTTGGCATTCACTGATTTTAGTTACATGTTCATAGAGATTTTGATGAAATGGTACATTTGTAGTAAATACAAATGAGCTTTGCAGTTTTCTTTTGCTCTTTTAATTTCTGCCTTGTGTGCATACGTGCTGAGTCACTTCAGTCATGTCCGACTTTTTGTGACCCTATCGGCCATGGCCCACCAGGCTCTAACCATGAGATTCTCCAGGCAAGAAATACTGGAATGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCCGACCCAGGGATCAAACTTGCATTTCTTGTGTATCCTGCATCAGCAGGCAGGTTCTTTACCACTAGCACCACCTGGAAAGCCCAATTTCTGCCTTAGGTATAAGCAAAATTTATTTTCATATTTGAACTAATTTATTTAATATTTGTCTCTAAAATTTCAACCTAATCTCAGTTAATGAGACTTCAAAAATAGAAATTGCTTTTCAAACTAGTGGATTATACTAGTTTGAAGGCTTTGTATTTTCCCATTAACAAGGGGAAATGCTGAATCTATTCAGAATGATGCCAGATAACCAGTTTTGTAGTTTAAAAATTTGTTGTTTTCAGTGCTCTATTTACCTCAGAGGTAACTCTAAAGGGGATAGGGGAGGGTAATGAAAATAAAATCAAAATCTTGAACAAAAATCATTTTATGCTTCCTGCAAGAAAGATACTCTGTAAATTCAGGAGATCTGAATCAAATCACTGAACATTTTGGAATTTGAAAGAAATTATGTAGTACTTATGATTTGATCATAAGAGTATTATAGTGGCCATATTACAGTAAAGATTATAAATTTCCTTGTTTAATGTTTCCATAATTAAGGACAGCTTTTGTATCTAAGAAAATGTTTATTGGGGGAAAAAATTTTAAACTAGGTTTTTTAGAATAGTCCTACATTGTTGGCAATTAAGGGACAACTAAAAGAAAAAATGTAGAATATTTAATGTCATTATGTATTTCTTTGATTAGGCATAAAATGTATCATAAACAACTGCTTTTCCTTCAGAATATGGATTTTTTTTTTCAATATCTAAAATTTACCTGGTCAGCCTATAGGATTTCCCAGTGAGACAAGTCAGTATAAATTAGGTGGATTTTGCCCCTTTTATACTTTGTTGTCTTTTTATCACATGAGAACCTATTTTAAAATACATGATTGAATTTTTACTTCTTAAATGAAGTTTTGAGTGTGGAATTCTTTTCTTTTAACCCTTTGATATGTTAGTGTAAATTAGTACTTTTATAACACTACTAGGCTTTATTTTTTTATGGAACATGATTTAAAAATTTTCAAAGTGTTAATTTGGCAGTGCTTTAAATCTTCATTATGTGCCAATACTGACAAGAAAAGGTTTTTTTTAATGTATTGAATTCACTATGTATTCAATAAATTCTATTTTAAAATA EMBV3_17115 GGGCACGTTACCACCGGTTATCTGGGAAGCCTCTTAGCTTGCCTTGGGAGTTTTAATGCA Gene BVV0102_070878 + 0 NULL GK000004.2:93266625-93313524 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184859 TCONS_00184855 TCONS_00184857 TCONS_00184858 TCONS_00184856 TCONS_00184854 1 XLOC_111441 Coding TCONS_00184855 XLOC_111441 Coding Coding RBM28 4:93310854-93344607 j TSS137548 5557 1 TCONS_00184855_4 751 0.00827784775958251 19 0.835920834320929 0.000484119552182224 0.000173792409334571 0.000220299868587135 0.000291599457736795 4.75906260015911e-05 8.40835153894862e-09 8.60645110160954e-05 3.87268752705476e-05 0.000508092407117824 0.000269625900536825 3.35330508046128e-05 1.00237002450223e-08 4.87876408400848e-05 7.16203575213362e-05 9.58639743252471e-13 5.34068005855626e-06 1.31006012402549e-18 1.71796733909911e-08 0.000102242481815314 0.000404789604213166 8.6524448365489e-09 0.000122334111198033 2.5691579494259e-08 4.62081112828817e-08 0.000699567197844625 0.000320345012786273 9.21696745152063e-05 3.22559822637088e-08 7.21610113924741e-05 7.18668181484278e-17 XM_005205680.1 RBM28 PREDICTED: Bos taurus RNA binding motif protein 28 (RBM28), 0.0 7270 100.00 0.725211445024294 NM_018077.2 RBM28 Homo sapiens RNA binding motif protein 28 (RBM28), transcript 0.0 3007 84.45 0.476336152600324 TCONS_00184855_4 sp|Q9NW13|RBM28_HUMAN RBM28_HUMAN RNA-binding protein 28; 0.0 1175 84.36 0.99866844207723 4 coding 1 1 1 1 0.490173737061096 0.0344647762113719 -0.0066393397877636 0.902383544804548 ACTTTAGTAAGCGTGGTCCTCTTACTAAAGCCAGTTACTTGACTCGCGTGCGCGACCTTGCGCGCCAGTTTCTCGGCCTCATGGCCGGACTGACCCTGTTTGTGGGCCGCCTCCCGCCCTCGGCTCGCAGCGAACAACTGGAGGAGCTATTCAGTCAGGTGGGGCCGGTCAAGCAGTGCTTCGTGGTGACCGAAAAAGGGAGTAAGGCATGTCGAGGCTTCGGCTATGTCACTTTTTCTATGGTGGAGGATGTTCAGAGGGCCCTCAAGGAGATTACCACCTTTGAAGGCTGCAAGATCAACGTGACCATTGCCAAGAAAAAACTGAGAAATAAGTCCAAGGAAAAGGGGAAAACTGAAAATTCAGAGTCCCCAGAGAAGGAGCTGAAGCCTAAAAAAGCCAAAGTGGCAGATAAGAAAGCCAGATTAATTATTCGAAACCTGAGCTTTAAGTGCTCAGAAGATGACTTGAAAACAGTATTTTCTCAGTTTGGAACTATCCTGGAAGTAAATATCCCCAGGAAACCAGATGGAAAGATGCGTGGTTTTGCTTTTGTTCAGTTCAAAAACCTCCTAGAAGCAGGAAAGGCTCTCAAAGGCATGAACATGAAAGAGATAAAAGGGCGGACGGTGGCTGTGGATTGGGCTGTGGCAAAGGATAAATATAAAAGTACGCAGTCTGCTTCTATCCCAGGTGAGGAGAAGAGGCCTGAACCTGAACATCAGGAATTGGATCAAGAGAATGGCAGGGAAGAAGAGGATATGGAGGAGGGGGAGAATGAGAGTGATTATGATGATGACGAGGAGGAGGAGGAGGATAAAGAATCAAAGCTGCCCAAATCTGTACAGATTCACAAGAGGGCGGTCAAGAGGCCAGCACCTGCAGAAAGCAGTGACGAGGAGCATTCTGATGACGACAGCGACCTGGAGGAAAGAGATAGTATTGATGGTGGAGAGGACCTGGCTCAGAGTGATACCAGCAGTGAAGAGCAAGAGGAGGAAGAAGTCTCAAAGAAGAAGAGGAAGAAGAGGAAACTACCCTCTGATGTGAATGAAGGGAAGACTGTCTTTATCAGAAACCTGTCCTTTGACTCAGAGGAAGAAGACCTTGGAGAGCTCCTGCAGCAATTTGGAGATCTTAAATATGTCCGCATCGTCTTGCATCCAGACACAGAGCATTCTAAAGGCTGTGCATTTGCCCAGTTCATGACTCAAGAAGCAGCCCAAAAATGCCTGGAAGCTGCTTCTCCAGAGGCTGAGGGTGGTGGACTTAAACTGGATGGCCGGCAGCTTAAGGTTGACTTGGCAGTGACCCGTGATGAGGCTGCAAAACTCCGGACAAAGAAGGTGAAGAAGCCAACTGGGACCCGTAACCTCTATCTGGCCCGAGAAGGCTTGATTCGTGCTGGGACGAAGGCTGCAGAGGGTGTGAGCGCTGCTGATATGGCCAAGAGAGAACGATTCGAGCTGCTGAAGCATCAGAAACTCAAGGACCAAAATATCTTTGTCTCCCGGACCAGGCTGTGCCTGCACAATCTCCCAAAGGCTGTGGATGACAAACAGCTCAGAAAGCTGCTGCTGAATTCCACCAGAGGGGAGAAGGCGGTGCGCATCAAAGAGTGTCGGGTGATGCGAGACCTGAAAGGAGCTTATGGGAAAATTAAGGGTCAGTCCTTGGGCTACGCCTTTGCAGAGTTCCAGGAGCACGAGCATGCCCTGGCGGCCCTGCGCCACATCAACAACAATCCGGAGATCTTCGGGCCTCAGAAGAGACCAATAGTGGAATTCTCTTTGGAAGATCGAAGGAAACTTAAAGTCAAGGAACTGAGGATCCAGCGCAGCCAGCAAAAAGTGAAATCCAAGCCTGGAACTGGTGAGCCCCAGCAGGTACCACCAGAACCTGGGAAAAAGCAGCAACAGAAGGCAGCTCAGAACCACATGCAGGAACAAAGCCAGGCCTCCGTGCGGCAGAAGGGGACAGCAGACTCTGTCTCGTGGGCAGGGTTCCAGACCAAGGCCGAAGTGGAGCACGTGGAGCTGCCTGATGGGAAGAAGAGAAGAAAGGTCCTGGCGCTCCCTTCACACCGAGGCCCCAAAATTAGGTTGCGGGACAAAGGCAAAATGAAGCCTCTCCCTCCCAAGAAGCCAAAGCCCCAGACAAACCACCAGAAGCAAGAGAAGCAGAAATTATCTTCCAAGCAGGTACCTAGGAAAAAAGCTAAAGGAAATAAGACGGAAGTTCGCTTCAACCAGCTGGTGGAACAATATAAGCAGAAATTATTGGGACTTTCTAAAGGAGTTCCTCTTGCAAAGCGGAGCAAATGGTTTGACAGTTGATGATGCTAGAAGACTGGGTAAGGAACTGGATTGTGTGCATCTTGGTAAGGCTTCCTCCCCCCGCCGCTTGTCACTTACGAGGGAAGAAGCCCCCTGAGAGCGCTGCCACTTTGGGATGTCAACGTTTGGACTTTGGTTCCTCCTGTGCGTGGTTAGCTAACCACAAAGAGGAATATCAGAAAAACATGGGACGCTTTTTACATATTCTGAGTGAAGTTGTGTCTATTAATTCTTACCCATTTTAATTGTGTTTCTCAAATGGAAACAATTATAAAAAGCATTCTTGACTGCCGAAGTTTTAAGATGTATATTTTGTTAAGTGTCTTCTCTAAGTGAGATAATTTGTGGCTTTTTGAATAACAGACTCTCATTTTTAATATATGTGACTCCTTTATTATAATTTATAAATGTCTTTAATATTCCCAACTCTCATTCAGTCATGTAGGCCTACATACTGCAGGAATTAAGAAAGAGCAGAGAAAAATGATTTCCAACCTAATCTCTGAGGTTGGGAGAAACTTGGAAAGTAATCGAGGGCATGGGGCCTGGCCAGGAGCAGTGCTTGATAATCGTCTGCCAAGTAAGTGGGGAGTAGCTGGTAGTTAACTTGAAGTCATTTGCAGTGGCCCACAGACACCAGCCTGGTTGGTGCTAGCCTGCATTTCCTGTCTTCCAGCACCACCTCCTGTGGACTCAAGAGATGTAGTGGGTAGTGGAGAGAGCAGTGAGCAGGAGGCCAGAGAAAGAGTTGGAAATACAGCATAGAATTCTTAGTTCTCCAGTCCAGTCCGGTGCTATCATGAGAGATGCTTTCTTCAGAACCATTGCTGACCTAGGGATATCACTATTTCATTGAAGTATCTTGGGAAACCCGTGAATGCTCAGAAATACTCTTAAATGGCTTAATAATGGGTAAAAGAGAGACCATGAAAATGCTGAAAGCTTTTGGAGAGAACTTGTCTCCAGAGTTACCTTGAGACTGTGTGACCTGGGGAGTCCTGGCAGCAGCTTGGCAGCCCATCAACCCTAGGATGGGGTCAGACATGTTATTAAGGGTGTATTGATGCATAGAATATCCACAGCCTATCTGTCCTTTGCTCTGTTTTCCCTTCTCCAACTCTCTGCCCACCAGACAGTTTTTCCCCTGTTGTCCAAATATCTATAAATTAACCTTTAAAAATAATCTTAACATTTAGGACAGAGAACAGTTGGTGTTCATTCAGATAGCTTTGCCAGATTTTCTCAGATCCAGATGTTTCTCCTGACGGGTTTAGCAACCCGGTATGTTTAAAACATCATTCAGTTGCCCTAAAAGTTCTTTAAAAAGTTCTAGGGTGAATCATCCACTTTCTCAACACCCAGATTCCTTGTGTGACGTCCTCCTGGGGGGCACGTTACCACCGGTTATCTGGGAAGCCTCTTAGCTTGCCTTGGGAGTTTTAATGCAAGGAGAATTGTGCCCACTTCTGCACTTCAGAGCCTGATGTTTCATGAAATGGAATTTTCTGAATTAAACATGAAAGTGGACTTACGGGCTCCTTGGTTCAAAAACAACATCAAAACAAGCATTTCATTTAACTTCCAAGACTGAAGGCTGTCGGTCAGAACTGTCAAGTGTAGGTAGATTTTCTGGCTCGATTATGTAGCAGCTTGACTCAGAGATACTTCTTGTAAATAAAGAGTCTTAAGATTGTGTACTGGCTGTTTCTTTGCTTTTTTTTTTTTTTTAATAAGAGGGTGGTGTAAGTGGGAGACTCGGTCGATGTGAAGTCTCCGCTTTGATCCACAGTGTACAAGTCCCTTCCTCTAGACTTCGCCTGCGGCAAGGATTCTGCCTCCACTGTCTTGAAGTGAGGTTTCCAGCTCCCTCTATTACAAAGTCAGGGCATGTGAAGTTGTTCTTGGAAATACTTCCAAATGTCCTCTGGTATGTTTTTGTCTTGAAAAGAGGTTTTCCAGCTAAAAATTCAGCGTACAGAACCTCAAGGCTCCAGAGAGCTCCTTCTCAGCATATATTTGACCTTCAGTCATCTGAGGAAGCAGGAGGTCACGTACGCCTCTGTGAGTGCTGACCGCTCAGAATCTTCGGTTCACAGGCCCTCTGGCTGACCCATATAGCCAGTTCATTGCTTAATATTCTTGTCACTCACTTTTTGAGAAGTGACTGATGGGCTTCTGCCAATTTTGTCATGGAACTGGCAACACTGCCCACCCACCTTGGAAAGTTCCTGAGACTCCTCCATGGACTGCTCCCTCATGGCAGTAGCCATATCATCAGACTGAGGATTCCCGAGGTAAGATTGCATTTCCGTTTATCTCAGATGATGCTCAGCTGTGCTTTCTCTCACTCAGTCCTCACTGGCGCTTAAAGGACCAGGATAAGGTTGCTTTGTTACCTTCGGGCAGAGTAAAAATTTCCAAACCTCCCTTTGCCCACGGTTGACTAATTTAGAAGTTACACAGATGCACTGTCTTATTTTGGTTCTTTTGTTCTTGTCCTGACGCCTCTTCCTCTCCAGGATTAATTGCAAAGTCCGAGACTGCTCATTGATTGGGATGTTATTCAGTGGCCCGGCGGTGGATGAGTTATAAGTACATCTACAGTGACTTTGGCTTTTGATTCTGAACTAGTGTTTGGCTGCAGACGGGCTTCTGTGTTTGTGGAGTAATATAGTGGGAAGAATGTGGAGGACAGACTGACTCGAGCTCGGTAACCAATTCTGAGAAGGAAACTGCAGAGTCACCAGAATAACCTTTTGGACCACCCCCAAATGGAGCATCTTGATGGATGGTAAATCCAATTTTCCTCGGGCTTGTCCACGCCACCCAGAGCCTGCTGCCTTTTGTCAGACATAAGACTTCACTGCTGCAGAGTCATCCTGGGATCTCCTTCCCTGGCCTTTTGACAGAAGGGAAATCCTTTTTGTCCTTGAGGGCAGGGACTATATTTTACACTTTTCTATATACCCTGCAATACTTAACAATGATTTACCCATAGTAGGAATTCATTTAACTCCATTGAACTCCCTGGAACAGAAGGCCATCTGTTCCAGGGTTTAGCGGGGTTTGTGAAGGACAGCAGAGTCATTTCCTGGGGTGATGTATGTGAAAGGGATCCAAAATACAAAGTGATAGAAAAAGAATAATAAATTGTTGGTCACAGTCCCTTGAGCATGCCACCTGTGTTCTCTCTGCTGTCCCTTGTCCATGCCAATTTGTCC EMBV3_11102 ATTATACCGGGGTTCAAGATACCCCCAAACTCCGCCTCACGCAGAAAACCTACAAGTCCA Gene BVV0102_225295 - 0 NULL GK000027.2:37521135-37841209 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155634 TCONS_00155635 1 XLOC_094782 Coding TCONS_00155634 XLOC_094782 NonCoding Coding CSGALNACT1 27:37675150-37874799 j TSS116409 2665 1 TCONS_00155634_5 152 0.0559099437148218 5 0.986676550729284 0.000199107443003692 0.000245084359082752 0.000104172423200098 3.11587205250408e-05 1.11154738728724e-05 1.23240167362653e-05 0.000172871505351593 3.5510472539792e-05 2.04395722630455e-05 0.000802829618866204 7.73084721738424e-06 5.36688940925437e-06 4.0912866572302e-05 0.000947861168307637 0.00027715478598086 0 0 0 0.000247552413070561 9.73448452391819e-05 2.27821633486531e-06 0 0 0 0.000174185760525488 3.6731023376287e-05 0.000112126180191832 0 1.86820564333982e-15 0 XM_005226156.1 CSGALNACT1 PREDICTED: Bos taurus chondroitin sulfate N-acetylgalactosaminyltransferase 1 (CSGALNACT1), transcript 3e-127 461 100.00 0.0953095684803002 0 noncoding 0 0 0 0 -0.138932722842725 0.42976999963539 0.0242472193627971 0.705111173702438 GTTTAAGAAAAATTTTTTTGGCCGAGTGGCATATGTGTGGGATCTATAGTATCTTAGTACAGTATGTTTTTATATGACAAGTTTCCCCCCCCCCACACACACACATGAGGATAAAATCACTCTGGCATCACGATCTTCCTTATTTCCAGAACTTTCTGTGTATTTCTGTACTTTAAACAACATTACCAGGACCTGTAAAGGTGGTAGCACTTTTATAAATAGGTTATGGAAATTCACATATTTTGAATCCTAAATCACTCTGTTTGTGAAAAACGTTTACATAAGAACACGTTGGCTAAAAGCTGAAACCCACGTAGAAAACCAAGAAAGTCTAAGGGAACCCATCCTTCCACTGCTGTCACTGTCCCGGTTCTGCTGGGCGACATCCATCGTAGAGGGCGGAGCCACAGGCGTGAGCAGGATGCTCTCTCCCTAGTTCTGTTTCTGTCCCTGGGAGAGACTAAGGATAATCCACGCCACCTCATACCAGTGCCCCCTCTGAAACAGTACCCCCCAAATAATCTATATAATCGAAATAGTATCTACTACATAATTACCAAAATAATATCTACTTTCTTTTCGGGTAGCACACTCACAAAAAGTATTATATTTTCTCACATTATGCTATGACTTAGTTTTGTAGTTTTATCATTGTTCAGCTATCTTATTTTTTCATTATTGTACTAACTACTGTGAAAATACACCTTAGCCAGCCCTTCATGACTCGAGACGTGTGTCGATGTGAAACATATTGATACCTAGATCACTGTGCTGATCTATTAGTATCTAACTGAGAAAGATTGGAAAACTTCTTCAGATACCTTGACAGGTGTGTTACAATCCCTGGAGAAAAGGTGATTAATCCTGACTTGATCTCCGTTTTCCTTGTATAGGACAGGGAAAGAAACACTTGCAGCCACAGGGGGTGCCCCCTATCTTCCCCACGGCCAGTCCCCATGACCTAGAAGTTGAGTCTCCTGGAGTCCAGCACAGCAGCCCCTGCTCAAGTTTTTGGTCCATCCTCCAAACCAGATTCTGCACTTAAACCCTAGTAAATCATTGAACAGAGCGATGGCAGACACCTCAGCAGAGGAAAGAAAATCAATGCTTTAACAATCCACCTGTCACTGCCTGGAGAGGGGGGGATGTTGGTGACAGCTGGAAGGCTCTGAAGAGGTTCCTTATTCCCCAGAGGGCTTGGTGGTGCTGGCTCTAATCTTTACACGCCTCATCACTAACCCAGCCTCCATGGGGGCCTCCATCTTCCCAGGGGGACTGTCATTTGACATGGATGGAGGAGGCTTGACCAATGACTTGTACCCACATATGCGTGGGTGCCCGGTTAGCTATGTATTGACCACCTCCATCGCTTTGCCACGTTTTGGGGGCAGCACACTGACACTTTTTCATTCCTTTGGGAAACGCTTGCTTCCCCCCCTGTTTCCCAAATCACAATTGAGTTCCTGTGGGGACCTCATCACGAGGTAACTCACTCAAGGGTGTGGGGGCTGGGGGCCGAGCCACCGACGTCTCAGGGCATCCTTGGAAGAGGGATGACCTCGCCTGGGCTGGGGGCCATCGAAGCACCCCCAAGAAGCATCCCCAGGAGCCAGCAGTCTGGCAGCCAGCCTGCTTCCTGCAGGCAAACAGGTGCCTGCCTCCGGGACCGCTGCCCTGTGCCCGCAAGTCCTCGGCCTGGGGACTTCCAGCGCTCCGCTTGGCCAGGCGGTGGAAGGGGCACCTGGAGCCAGAGGGCTGCGTTTTAGCTCTGGTCCTGCCTTGGCGCAGCCGCGAGGCCTCTGCAGACGGGATGGCAGGTGGAGAGGCGGCCTTCTCCAGCAGGACACTGGCCTTCCCGAGTCTCCATCATTATACCGGGGTTCAAGATACCCCCAAACTCCGCCTCACGCAGAAAACCTACAAGTCCAGGGCACCCGTGGCCCCGAAGGCATGTGTGTGCGTCGGGGGCGTTCTCAACACTCTACTGCCTGCTTTCCACTCCGCCCCGCCACTTCCCTCCGCGGCCCCCCAGCGGCCGTCAGGGGTCCCTGCAGACCTCACTCCCCGCAGCGGCGGGGCTCGGGGCTCACCGCTTTCCGACCTTCGCGCGCGGCGAGTACACGGTCTCTCCCCGGCGGGCGTCCTAACCCCCCAGGGCCGCGTAGACGGCGACTCCGGGATTAATTCTCCCCAGCGCCGTCTGCAAAGTTTTGATTCCTTTCCATTTCAAGGAGGAAAGTCAAGATATTTTTACTCAGTGGAAGAATGATGTAGTTTCATCCTAACCTTCTTTTCTTATGCTTCCAGCAGCAGACTCACGGTGCCAACCCGTCTGGCTCGTGGTAGCACTGTGTGCTGCCTAAGAGTACTCTGTCTTTCTCCTCTACATTGTCAGACTTGATTCCCTAAAATCTTGCGTATGAGTCAGAACCTACCTTGTACCTGTCTGAGCAGAATTCTTAAATAAAGCATCAAGATACCTTTAGATTTCAAAACCAGTTTTGAATGAGAAGGCTGGGATCTTGAATACAGTGCTGAAGAGAAGTGGTGGTGGGCATCTTTACCTTATTTCTGATCCTCAGGGGAAATCTTTTATCATTTCACTGATAAGTCTGATGCTTGTTGGAGGGGTTTTGTAAATGTTCTTCAAATTAAAGAGGCTACT EMBV3_00191 GTTTCATGCTCCAGCTCCACTTCTGTGGGCCTAATGTCATCAACCACTTCTTCTGTGACC Gene GeneID:619083|LOC619083:XM_002693828:105_cdna Constitutive 0 NULL GeneID:619083 15 GENE LOC619083 NULL similar to Olfactory receptor 5AN1 (Olfactory receptor OR11-244) EMBV3_21469 GGCAAGTACCTTCCTGTAGACCTTGTGGCTGGACACTCCCTCTTCTTTTTATTTTCCTCT Gene BVT0102_311554 - 1 EMBV3_16920 GK000030.2:89908676-89987695 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252498 1 XLOC_155439 NonCoding TCONS_00252498 XLOC_155439 NonCoding NonCoding - X:89973227-89974973 - TSS189719 1746 1 TCONS_00252498_3 174 1 0 0 0 0 3.80488373191137e-05 2.82771408061424e-06 4.60960980510255e-06 0.000103541190784297 2.03255201711523e-05 0.000845048376077508 0.00120654111854403 5.63775840921732e-05 4.91504833482904e-05 0.000299089167613756 0.000546913091181916 0.00042430496864388 3.02538001646505e-05 9.50874189409783e-06 0 0 0.0003418610584704 0 0.000238006208951034 0.000136612429397148 2.88052008655085e-05 0.000130950619898939 0.000143249747500199 8.05380888348229e-05 0.000148533757374075 0.000180727140511075 6.54253373705323e-05 NM_001102968.1 LOC100125049 Xenopus (Silurana) tropicalis uncharacterized LOC100125049 (LOC100125049), mRNA. 4e-40 170 69.56 0.24971363115693 0 noncoding GGAAAGGGTGGAACCTCATGTGGGCTCATAAAATATAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAATGTCTTAGGAGTCATGTTACTAGCTGAACAGGTGATGACATAAAAACCTTGGATTCTGCTTCAATCCAATTATTTCCATGTGTGTGTGTGTCTGTGTGTGTGTGTGCATGTGTGTGTTTGCTGACCCCAATTCAAAAGTTTAAGTTTAATCGCATGATTAAACTGATGTGATGTGCTTATATAAAATGGGTGAATTTTGCTATTTTAACTCTCACCAGGCAGTTTCATGTCCAAATTCTGTGGCTGAGACTTGGCAAGTACCTTCCTGTAGACCTTGTGGCTGGACACTCCCTCTTCTTTTTGTTTTCCTCTTAAAAAGATGGTTTTCTTTTTCCAGCACATGATTTATCTTTCATCAAAATTTCAGTGTCATCTTTGTGCTGTTTATATATAGACCCTTTCCACAGTAGCATAATTTACACTGGTCTGCTGTCTGTGTCCATCCCACTTCCTTCCCTGGGGCACTGCTTTCTCCTTCATAAGTCATTGTTTATTTAAGTCTCTTGTGTCTTTGCACACGAATGCTAAGCTTTATCTTATTCCAGCATCTATCTCTAGGACACCACTGGAAGGGAAGATGACAGAAGAGGGTTTGTCTACCGAATTGTAATAACATTTCATTCCTGTCTCCTTAAGACAGGCAGAAGCAGAGATGGACTATCAAAAGATGCAACAGAACCAGATGTAGAAACAGCCAGAGACAGGACAGCCTGACAGAAAAACAGAGATAGCTGGTCAGGCAGGCTGAGAAAGCCCAACAGATGGACAGACTCAGAAATTGTACCTCCTCCCGCAAAAGAGACAGCTAGAAAGGCATACACAGAAAGGGGCAGACAGAGACAGGTGGAAATAGATGGAGACAGAGACAGGGAGGCAGAGGAAGCCAGGCACAGACAGGGACAAACAGACACCCATTCAAACTAAGGCAAAGAATGGTGGTTGCAGACAGAGACAGGGAGACAGGCAGAGGCTGATTGACACAGAGAGAAAGACAGAGACAGACAGACTGAGAGACAGAGAAAGACAGACGCACACTGAAAGAGAGCCAACAGACATAGAGATAGTGATGGGGAGAGAGAGAGAGTCAGAGAGAAACAAGGTTGGGGGTGGGGAGAAAGACAGAGACAGATCGGGACAGAAAGGGAAAGACAAAGACAGACGGATGGAGAAAGAGACACAGAGAGATGCAGATACAGACGGATACAGGAGCACTGGAGAAATACAGAGACAGAGACAGAAACATAGAGACCCAGACACAAACAGATTGTCAGAAACAGAGAGAAACAGAAAGATAACGGACAGTAAGACAGAGACAGAGAGTGACGAAGATAGGCAGTCTGAGACAGAGACTGAGGAAGACAAAGACAGAGGTAGATAGAAATTAGACAGGGATGCAGACAGACATCATGGAGACAGAGACAGGGGATGACAGAGAGAGTGGCAGGCATACAGAGAGGGAAAGACAGAGACAGGGATAAATCCTCATCATTGTCAAGGACCACGTGGTATCCCATAGGGGTACATCTCTTTTAGTGTGGCGTTTACTTTGCTGTTATTTAGCTTGATGGTTTCCTGTAGCGTTACCATGACTATACATTTTGCCCTGCCTCCCCATCTCCCCATGCCTTTACGAAGAGGCTAACAAAATGAGTATCAACATGGGAAAAGGTTTC TCONS_00247530 . 5' 160769 TCONS_00247530 . 5' 160769 EMBV3_07367 CCGAGGATCTGCTCTACCTGGAATTCCTGCAGAAGTTTGAGAAGAAGTTCATCAACCAGG Gene GeneID:338059|ATP6V1B1:NM_176654:5_cdna UTR3_Alt 2 NULL GeneID:338059 11 GENE ATP6V1B1 NULL ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 EMBV3_15373 ACAACCCTGAGACAAAGAAGACGCGAGTGAAGCTGCCTTCGGGCTCCAAAAAGGTCATCT Gene GeneID:535056|RPL8:NM_001034625:113_cdna Constitutive 0 NULL GeneID:535056 14 GENE RPL8 MGC127227 ribosomal protein L8 EMBV3_33312 CGCCCTGCTGTTCGTGCTTTCGGACTCCGTGCTGGCCTGGAACATCTTCACCTACCTTGT Gene GeneID:518466|TMEM86B:NM_001034528:172_cdna Constitutive 0 NULL GeneID:518466 18 GENE TMEM86B MGC126979 transmembrane protein 86B EMBV3_30807 CCTGACTTAGGCTTTGATTGCCGAGGCATCCACTTCAAAAAGGCATCTGCTCCAGTGATG Gene GeneID:280922|SAG:NM_181000:8_cdna Constitutive 0 NULL GeneID:280922 3 GENE SAG NULL S-antigen; retina and pineal gland (arrestin) EMBV3_31437 TATGACAACCACAAGGTCATCCTCCAGAAAGTGGCCGCCTTGTTCATGGCCTACTACTGA Gene GeneID:508029|TRPM2:XM_002685138:113_cdna Constitutive 0 NULL GeneID:508029 1 GENE TRPM2 NULL transient receptor potential cation channel, subfamily M, member 2 EMBV3_35230 AACCCTTCCACCGGAAATCGACCAAGGGAACAGAGTTCAGAGGCAGCAGAAACTGGTGTT Gene GeneID:533206|PDS5A:XM_002688229:146_cdna Constitutive 0 NULL GeneID:533206 6 GENE PDS5A NULL PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) EMBV3_15375 GCTCAGCCTTACTTAATCAGCATGCAAGCTATCAGGAAGCATGGCTCATGTTCACTTCTA Gene BVT0101_024225 + 0 NULL GK000001.2:711644-922634 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41033 CGAGTCCTTCTTCATTGTAACCACCAAATAAGAATCATTCTCCAAATTGATCCCGACAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13983 TGTGTCTCTTCCTGGCATCTGGCTGCTGGTTTCTGGGCTCAGTGGATGGCTTCTTGTTTA Gene GeneID:788190|LOC788190:XM_002689104:40_cdna Constitutive 0 NULL GeneID:788190 7 GENE LOC788190 NULL similar to Olfactory receptor 2T4 (Olfactory receptor OR1-60) EMBV3_24516 GTCGTGCAGCTGTCCTCCATCAGCTTCCAGCCTCCAGGGATCTGGCCAGCCAACTCGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36407 GCTCCAACACCTCCATCAGGAGAAGATCCTCCCACAGCAGAACCTTGTGGCTAAACTCAA Gene GeneID:520936|PROM2:XM_002691159:206_cdna Constitutive 0 NULL GeneID:520936 11 GENE PROM2 NULL prominin 2 EMBV3_35472 CAAGCTATGTGCGGAGGAACGTGGCTATGAGAATCCTATGCAGTTTGAAGAATCGGACTG Gene GeneID:505369|MAP3K13:NM_001101853:60_cdna Constitutive 0 NULL GeneID:505369 1 GENE MAP3K13 MGC179376 mitogen-activated protein kinase kinase kinase 13 EMBV3_42639 GCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTCCTTATTAGGCCG Gene GeneID:619131|RPS15A:XM_002694842:756_cdna Constitutive 0 NULL GeneID:619131 18 GENE RPS15A NULL ribosomal protein S15a EMBV3_14485 TGGCCAGAAGCTGGAGGAAGATGGCAGAGGATGTAGAAATGTCGATGAATGTGCGGTGGT Gene GeneID:100139843|LOC100139843:XM_002684967:250_cdna Constitutive 0 NULL GeneID:100139843 1 GENE LOC100139843 NULL similar to 6130401L20Rik protein EMBV3_36536 TTCTGCAAGGATGGATGGGGTCTCTGGGTTTGGCAGAGCGAGGCGTACCTAATAACTGAT Gene GeneID:751575|SECTM1A:NM_001076529:159_cdna Constitutive 1 NULL GeneID:751575 19 GENE SECTM1A NULL secreted and transmembrane protein 1A EMBV3_18839 AGCGCCCAAGTGCCACAACTACTGAAGCCGGTGAGCCCTATAGCCCATGCTTTGTAAAAA Gene GeneID:407237|TLR6:NM_001001159:17_cdna Constitutive 0 NULL GeneID:407237 6 GENE TLR6 NULL toll-like receptor 6 EMBV3_14235 CTTTTAGTTGAGGTGGTCTGGAAGGGCCTCTGAAGAGCGTTTAGGTTGAAGAATGGAGCC Gene BVV0102_232253 + 0 NULL GK000001.2:139911370-140044681 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09403 GACTCATATACTAGTATTCAGATCATGAAGGGCTGATGGAATAAATCTTTTGGACAGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08475 TCCTAGCATTTTGCATCTACCCAGTACCACCTAAAAGAACATAAAGTTATCATGACCCTG Gene GeneID:510012|STIL:XM_002686500:620_cdna Constitutive 0 NULL GeneID:510012 3 GENE STIL NULL SCL/TAL1 interrupting locus EMBV3_08245 GCACAGAGCCTTCTGAAAATAACACTACTCCAAGAAGACTCATCTGTTTCTCCAGACTTC Gene GeneID:511461|MKL2:XM_002698031:238_cdna Constitutive 2 NULL GeneID:511461 25 GENE MKL2 NULL MKL/myocardin-like 2 EMBV3_00350 TGGTCATCTCACTGTGGAAAAACATCACACTCATTCTTGCACTCGGTGCCCCCAAAATCT Gene GeneID:507308|PHOSPHO2:NM_001045965:211_cdna Constitutive 2 NULL GeneID:507308 2 GENE PHOSPHO2 MGC137346 phosphatase, orphan 2 EMBV3_39167 CCTGCAGGCGGCCGGGAATTCACTAGTGAATAATCGAATTCCCGGGGCCGCCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_22748 TTCGTGGCATTCGCCTACTCTGTGGAGTCTAGGGACCGGAAGATGGTTGGTGACATCACT Gene GeneID:520748|IFITM3:XM_002697323:234_cdna Constitutive 0 NULL GeneID:520748 23 GENE IFITM3 NULL interferon induced transmembrane protein 3 (1-8U) EMBV3_18688 GGGCCTGCTGTTGTTTCTGTCATGCGGTGAATGTCCCAAGAACTAACAATGATAGCTGTA Gene BVT0102_089407 - 1 EMBV3_08341 GK000030.2:81951479-82023910 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244806 1 XLOC_150558 NonCoding TCONS_00244806 XLOC_150558 NonCoding NonCoding LOC100849028 X:81946752-82029274 j TSS183910 7244 3 TCONS_00244806_3 103 0.190364439536168 11 0.91234958374232 1.62326791011992e-05 1.4385802911252e-05 1.48407764971216e-18 5.50243003821061e-17 3.44252373939446e-05 4.81119999724802e-42 8.49818266884294e-06 4.1896882985035e-76 3.23576993011829e-06 3.43989647324574e-17 2.27340653477632e-47 7.79740822619693e-145 1.08128665101366e-06 9.76012759757265e-06 2.06968463623986e-122 0.00444577838814953 1.01354111241456e-05 0.000671061014528136 2.71433423209669e-06 2.73165367653874e-75 2.16280543725858e-29 0.000328466327618773 0.000478803039887985 0.000462135234770716 4.90926234332937e-57 1.58024317856853e-66 5.87183154236673e-05 6.88112590270085e-40 9.53425737264561e-05 1.0181214708825e-71 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 3e-69 269 89.42 0.0284373274434014 NR_028379.1 FTX Homo sapiens FTX transcript, XIST regulator (non-protein coding) (FTX), non-coding RNA. 8e-76 291 73.87 0.0599116510215351 0 noncoding 0 0 0 0 -0.0233074661742657 0.825452174400281 -0.00113715728862404 0.984334505084538 GCGCATGCGCATTTGAGACGACATTGTGAAGGTTGGATTTAACGCGAGGGGGAGAGGGGCGCATGCGTATTTCAAGCGAAATGACGCGAGGAGGCGCGCAGCGTACGCGTAATTAAGATTGCAAAATGGCGAGGGGGGAGGTGACACCAAACTTGATCAGAAACCATGCCACAGGTGAAGAGGTATATTGAGCCCTGCCTGGCCAGTGAGGTTACTAGAGAATTGGAAGAGGCTCAAGTCAGCATCCTGCACATGGTTATCAAACCATTGTGAAGTCTTATCACCTGGGATACTTGTTAAAAATGCAGATTCTTGGGCAGCTAGAAACCTTGTCACTGGTCAAGAGCAACAAGTAACAAGACCTACTTGTCACTTATCCTGAGGCATCGTGCCCAGTGGGTTTACCAGCAAACCAGAATAAAGCATCATTGCCCTGGATGTCCTTGTGAGATGGTTGGGAAGTCTTGGCTGAACTGTGGAGAATATCTTTGAAAAGTGTTTTAGAGAGTCTACCAGATTGGCCATGTGAGTGCCTGTGCAGCAGAAGAGTGGGTCTTCTCAGTGGTTAAGGTAACAAAGTGATTAAGGGCCCTTAAGCCTGGTTTCTTTCCATGGAAAAGAGCATGACAAAAGACTGAGTGTCGACATGTCCCTGGCAGCAGGCATGAACGAAAGAAAATGGCTGTGCACAGAGGGAGAATTGATCACTGTCTGTTCTTCAAAGACGCTTCCCTGGCAGTGGTTGGGGCTGTTAGCGCTCACTGCCCTAACAGAGACCTGCTTCAACAGGGTACGAAGATCCATCATTTGGCCCAGCTGTATTATGGGATCATCTGACTTCATGGTGTCATTGAAAGGCTTACGTGTGCTAGTGGATGAAAATATTTCAACGCTTCTCTCTGCCGTCTTTTTGCTGCCATACACTGTGCTGGGTGATGGGGATATGGAGATGAATTAAACATGATTCCTGCCCTCAAGGAGTTCTCAGCCTAGTGAGAGTTTGACATGTACACAAAGAATTACAACAGTATGGTATGCTCTACAATGGAGGTATGTACAAGATACTGTGGGATTCAGAAGAGAAATCATTTGACTGAATCTGGACATGCAAAGGTTAGAGAACTGATGATTAAGTTGAATCTCAAAAAAAGTAAAGATTGACTAAGCAGAAAAAGTATGGAGATTAGAAATAGAATGATAAATTGGGAATTACAGTTAATTCATGAAATTAGGTTGTAAATGTGGGCTGGGAATAGACCTTTATATAGTGTGAAATGAATCAAGTGAAAGTGAAGTTGCTCAGTTGTGTCCGACTCTTGTTGTGTGTGACCCCATGGATTGTAGCTCACCAGGCTTCTCCGTCCATAGGATGTTCCAGGTGAGAGAGTATTGGAGTGGGTTGCCGTTTCCTTCTCTAGAGGATCTTCCCGACCCAGGGTTTGAACCCAGGTCTCCCGCATTATAGGCAGACACTTTACTGTCTGAGCCACCAGGGAAGTCTTATTTTGAATCAAAGCAAATTAAATTTGGATTTCATTTTGAGTGTTTTAAGAAGGGGATGCTTTTGATGGTCACTGAGATGGTAGTAAGTTATGGAAGATTTTCAGATCTAGACAGGGAGATCAGTTAGAAGGATACTATAGTAGTTAAGATGATAAGTGATCTAAAGCTGGAAGGAGTGACAATGAAGATAACCTCTTAAATACAATGTTAAACAAATTATAGATATAATTAGAACATGGGAAAATTTAGGCTTTCAGACTGGCAAATGGGTATCCTCCATCCCCACCTTGACCTTCATGAAAGATCCTTGCATGTTTTATTATTTAGGTGTTGCCATTGGTTTCTTCAAGACCAGGGCTTGGCTGCATAGATTTTGCAAGTTCTTTTAGGGGGTGGGGCAGCCATATGTGAAATGTCGACTCTAAGAAAGACAACTGAAGAGCCGCAGACTTCTCATAGTGTTACTAAGTTCTTGATCCTTCTCATCAGTAGCAGGGCTACCCACACTGTCACGTATCTTCCAAAATATTTTTTACCAAAACTGGAGGCTTTTATACCCTCTCAAGGAAGAAATGGCCTTGGTTGTTATTGTCTTAATGCTTTATTTTGCTTAAGGATTTTTGAATGTTTATATCTCCTGGTAAAAAATATTTACAATAATTAAAAATATAAATATATCCTGAATTTATTTTCTTGTTTCTCAAAGCAATATAAATACAATGTTTGGCAAATTCTCTCCTTAAGGCTCAGAGGATTCAGAGAATGGCCTTCTGTGACTAGAATAATTGATTGGAGAGTATGTTTAAGTAGACCTTTTGTATTTTCAGTGAACCTTATGTAACTAGCCATGCTGAAGAGCAGTGGAGGGGAGAAGGGTTGGAAGAGGAAGCCCTGAGCAGGACAGCAAAACAGTACAGTGACAGTTTGGGCCTTGCACTCAGATCTAGTCTCATACTTACCAATGTAGTTTTGAGCATGGTTTTTCACCTCTCTGTGGTACTTTATTTCTTCTTATGTAAAATAGAATTAGTGATATCTTTTTGCAATGATGAGTGGGGGTGGGAATATAAGGATTTAATGGGATTATTTGTGTAAATTGCTTGGAACAGATGTGGGGTATGCTGAATGCTATATGAACTGTAGCTGTTGATAATGATGTTAACCTTGACAAGGATTTAAAAAACATAGTTAACTAAAGGTACTTAACATTTTATATTGTCAATAAGGATGTTGGGGTTTGCAAAAGAAAGTAAAGCTACCTGATCTCAAGGTTTTCAGTGGCATGCTAGAGGGAAGTCACTTTTCTGCTTTTTTTTTCCCCCTCTGCCAAATAGGTTGGGAAACCAGATGACTTTTGTCCATGCCCTGATCACTAATCTATTGCATTTGCTCTTATTTCCAAATATAAAACTGTTGAAATTTTGTATAATACCTAAACTGAATAAAGTTATCCTAAAAAATGTAGAAAAATACTTTGGAATTGGTCAAAACTGGATTTGAAACCTATTACTAGCTATGTGATCTAAGGCATGTTACTTAACCTAATTGAACCTCAGTTTCTTAATCTAATATATAATAATTAATTTGCAGGGTGTTCATGAGGATATTGTAAAGTGTGTGTTATAAGCACGCTATAAATTACAGCTATCATTGTTAGTTCTTGGGACATTCACCGCATGACAGAAACAACAGCAGGCCCTGGTGGCTGGGAGGACTTCATGGATCCAACAGCAACCTGAAGAAATCCTACTCGGATGGATATAATACAACCTGCTAAGTGTCCTAGCACTTATCAGGTTGTATTATCATTGTCCGTGTCTATGGCTCTCGTCTACCAGACTCTAAATTCCTTACAGGCAAGGACAGTGCCTTATTCATCTTTGTATTCGCAGTGCCTAATCCGGTGCACATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGTGATCTCCATGGGCTCATCTTGTCCCCGCCAGTTGCCTACAACGTCCAAGCTGTCTTCAATATGCTTTCTTCTGAAGCTCACTCCTGTCTTCTAATTCTTTTGCCAAGGACTTTTCTGTGTAGTGCAAAGACAGCAAATATACTTCATCTCAAGTACCATCTCCAGTCAATTGATAGTACCTGTCTTTATTATGTTCTATAAAAACAGTTCTGAAGCCAGGTGTCAACTCAGTATGAAAGAGGATTATAACTAATTAGTGATGTTTGCTGGGGGTGGGGGAAGGGGATTAGCAGCATACGTGCCATATATATGTCATATTTAATATTGTGTTTTCCATGAAATACTCTGTTTCCATGCCTGTATTTTAGTCTTGGCTACTTGCAGATGTTGCATTGCTGCTGCTGCCACCACTGCTGTTACTACACTACACTTGCTACGAGTTGTTCCTTGGGTAGGACCAGAGTGATCATTGATCAGAAACTCATCCTCACAGTCTGGGGTTTGCTCCTGTTGCTGGTATTCACAGTTTTCCCCTTTCAACTTTACCTCAGCTAACCCCTTACCTACATTAACAGGTAGGCCTTTGGTTTATGTTCACCACTCAACAGGCTCATATTTCCTTTTTATTATTTACTGTGATTAATCATTGCTTCATGAGAAGCCTTCTATTAGAAGATGTGACAACTAGAATACAAGTTAAACCATTCCATCAAGGCCCTACAGTGAATCATATAAGCTCCCTTTTAATATAGGAGAAAATTGAGCATACTCACACACTATAAGGCAAGGGAGAAGGGAGATATTGTACATATAGGAGAGAGATGATAACATATGGCTCTTAGAACATAGGCGGAGGGCTAGCCTTAGATCAAAGGAGTTACCTCTTTACTGGGGCATAGTGATAAGAATAGGAATTAGAAACAGTACTGATAAGGGTGTTGGAGATTTTTAATTGTAGAGGTGGGTGAGAGGAAGCTGACCAGGGACAGGATTACAGAAACAAGAGTCTTAAGAAATATCCAGGCCATATCAAAGTGAGCAACTAGTTTGAAACTTGATTAGAGACTCAGGAAAAGAAAAGGTAATCTTGGGCCATTGTCACAAGTAGCATTTGGTCGCCTAGAATTGATTTTGCTTGATTGAGGGATAGGGGCTTCTCAGGTGGCTCAGTGGTAAAGAATCCGCCTGCCAGTGCAGGAGCCACAGGAGATGAGCAGGTTCGATCTCTGGGTCGAGAAGATCCCCTGGAGGAGGGCATGGCAACCCATTCCAGTATTCTTGCCTGGAGAATTCCATAGACAGAGGAGCATGGTGGGCTACAGTCCAGAGGGTCACAAAGAGTCAGACATGACTGAATGAGCATGATTGAAGGATGGACAGCTAGCAAGAGAAGAGTTAAACACCAATGGATTTGAGTATCCAGATTGTATATGGAAGGAAGGTCAGAGTCTACATAGAAAAAGTGGCCTTAGTATGATCAGGATGGGTGCTGAGTCTTTGGAAAATGGTATGATAGGATCTATATCAGAGACTGAACTTTGGAATGGTAAAATTTAAAAACTGGAGTGATCAAGATACCCATGATGCTAGGATGTCAGATGGTTGTTTACTTGGGTATTGAAATGACCCAGGATTATAGCAAAAGCTGGATTAGGAATGAACACTGAGGGCTAGATAAAATAGGTTTCAGTGACTGAAGAATGATCTGGGGGTGGCACATGACAACTGTACAGGTGCAAGAGAAGAAAGGATGCAGTGGGTGGAAATTACTAGAAGATGCAAAAACTGTTGTTTTCCATTGCACTGAGGTTTTGGCTGGCAGAATGCACATCTAAAATGATTCCCTTCTCTATCAAGTGCTTATTCTATGCCTGACATTTTGCTGTGTGCCATATGTTTCTCCCTTTTGGTCTGTCACATATCCTGTGTGAAAATAAACAGCAATCCCAGGTGAGGGTTAGGGTTAGACTGCTGGCCCTTAGCACTGGTGCAATCCTGTTGCCATCTCCTAACTCTTTGAAAGAGCAGAAGGCTGGTCATCTGCAAGTGTCAGAAAAAGATTTAGGATCAAAATTTCCCCTTGACCTTGATGTAGCTTGATTACATGGTACATGCTTTTGTTGGCTGTGTTCCATAATATGCTTTGGCCTCTGAACCTCTGAGTTGAGGAGTGAACTAGAACTGTCCTTTAAAAGACAGGCACAGTTCCTTAAAAACACATATTAATTCAGAACGAGACACAGTCCTATTATCTAATTGAGCTTTTAAGATAAAGAGTAGACAAAAGAAAGCCCACATCAGTGGATGAATAACAAAACCACTTTGTAAAAGCCATTTAGGGTCAGGATACATCCAGTTTAGTGGCCCTGTTGTAGATGTTCCCTGTGTTGTTGGGAAGGAGGGCTGGGAATTGATGCAAAGAAATAGCCCTTAGAACTTGGAAGGTAAAGTTTAGGGTGAGTCTCTGTGAGCCCTCTGACACCGCATGCAGTCCTTTTTCTTTTGTTATAGTCTTCAAACGAGTCAATATTCCAATGAAGGTTTAGAGCCAGTGTGTTAGAGTGACCAGGCCTTCAGACAGCCTATCCCCTCCTGTGGGGGCTGCTGTATATTTATTCCTCAGGAGAAGCTGGTAGAAGACTTCATGAAGGAGAAGAAAAGGAAAAAAATCAAAGGATGACTACAGCCTCTCTTCATCTCAGCTTTGCAAAGCATGACTCAACAGAGAGATCACATTCTTGAAGACTCTCCAGACCACAGCCACCACAGACACTAACCACAGCCAGCAACTGGACCTCAGCCCTGGGATTTACTCTTGATGTCTCAACTGATTATGAAATCAGTAGGAGAGCTTGTATCCCTTTCTAACTTGCTCATCAGAGATTTTAAGATTTGCATACATGTGGTAGATTGAAGATAAGTTGTTGTGCTGCACTATTTCTGTTGCTACTCGTGAGAGTCACTACCAGCCTCTCTTCTCAGGATTAATGAATGGGCCAGAAACCGTGGGCAGAATGACTTCAGGCAACCCCAAACACCAGATATTGGCATAAGGAAACAGTACAATGAAAAGTCAATACTTGGACCTTTGTCATTCCACAAAGCATGATGTACTATCTAAAACAAAAAAGAAGAGCTGCTTTGGAGAAGGGTTTTAAAAGTTTGTTTCATCAGAAGAAAGATTTAGAAGAGGGAAAACTTCCAGTTATATAAGATGGGCATTTAGCTTTTAAAGGCATCTGTCCCCTGTGTAGGTCATTGAGATTGATACCAGGAGCAGACTGTGGCTGCCAAAGACAGTTTAACTAAGTGGTTTCATGCTCCTAGAGAGATGGTGTCACTCTCTTGTCTCTCACTTTGGTGGATATTCATCTGCAATGAGTCCAGTACCTGAAGGAGCAAGAGAACAACAAGTATACAGGGGGACAACAGTATGGCCTTCTGAGTGAAGATAGCAGCGGAAAATGTCATGAGATTGACTGCATTGGGCTGGGCTTGTTCTTTTAAAAAAAAAAAAACAAGTCTTATTTTTGATGATAAAAGTAACAGGTGGTCATAGTTAAAAAAATAAAGTGAAAGGTATAAATTAAAAAGTAAAGAATATGATTTTACAACTCAAAATCTTATCATTTGCATGTTTCCTTTTACAACTTTAAAAAAGTGTAACAGTTTAAAATTGACATTGTACTTGTTAATCTCCAACTTGCTCATTTGAAAATAAATAAGCATTTTTCCATGTCATTAGAATTACTTAAAA EMBV3_42667 TCTTTGAGGGTTACAAGTGTAGCGTGGAACAAGGTCTGTACCCCACCTTCCCGCCTGTGA Gene GeneID:526885|DALRD3:XM_002697043:501_cdna Constitutive 0 NULL GeneID:526885 22 GENE DALRD3 NULL DALR anticodon binding domain containing 3 EMBV3_28084 CATCACAGACCTTGTCATGACTGTTTTCCCAGAGATGTTTCCCAGTGGGACTACACTTCC Gene BVT0102_360794 + 0 NULL GK000010.2:36285269-36293814 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020553 1 XLOC_011228 NonCoding TCONS_00020553 XLOC_011228 NonCoding NonCoding - 10:36287657-36288495 - TSS14443 838 2 TCONS_00020553_2 40 0.134844868735084 1 0 0 3.59729799576549e-05 0 0 0 1.28057077089967e-05 0 0 0 0 0 1.28007970449715e-05 0 0 0 0 0 0 0 0 1.44903494630922e-05 0 6.56854172360882e-05 0 0.000132285887317828 1.6814954651101e-05 0.000419508935431263 0 1.15861939645736e-05 9.3268760066285e-05 XM_005216152.1 TRIM21 PREDICTED: Bos taurus tripartite motif containing 21 (TRIM21), 8e-27 125 86.24 0.127684964200477 0 noncoding 0 0 0 0 GGAAATGACAACCCACTCAAGTATCCTTGCCAGAAAATCCCATGGACAGAGGAGCCTGGTGGTCTATAGCCCATGGGGTTGCGAAGAGTCCGGCCTGACTGAGTGACTAATGCATCACATCACAGACCTTGTCATGACTGTTTTCCCAGAGATGTTTCCCAGTGGGACTACACTTCCTAATGGTAAGGAATAGAAGGATTTAACTTATATCATTGCCTACCTCTCAAAACCAACCTTTGCAAGTCTTACAGCCCTGGGTCTGGGTTTTTCTTATAAGAGTTTAAGAAACAACGGGAGGCCGCACACGCACACACACACACATTTCACTTCTTCCTTTAGAACTTTGTGAGGGCTCACACACACACACATTTCACTTCTTCAGAGCTTTGTCTGTGAGGGAGGCTGACACATAAGGGCCTGCCCAGGCAGCAGACCATCACCAACTATACACTGGACAATTTTTTCCAGAGCACCTCATTCTCCATTGAGAATTGGTCTTCTTGAAGTTGGACTCAGAATGGAGATTCATTCCCTGGCACTGAAATAATAAAGAGATCTGGAATATCTTGGTAATGCAATTTGGCTGTACAGTAGTTCTTTATTTCTGGTCTTCCAGAGGTTGAGGGGTCCTGCAACAGTTCAGGATAGGACTTATGAAGAACTGGTGTTGATGGAGAATGATTTCCTTGATCTGTGGCTTGTGACAAATTGGGGGTGGGGGTCAGTAATGGGAATCTTGCAAAATGTATTAGCAGATCAGGCAGAACTGTCTTGTCCAAATCTTCAGTTGTAGCTCCTCCAGTAGATGGCGCCTCTAACTCTTACTGCCTTCATTTAT TCONS_00013457 . 5' 591 TCONS_00013457 . 5' 591 EMBV3_23628 AGCCTTCGGTAAACACTACAGCTCCCAGCCATGCGAAGTTTCAAGACCAACAGAAAAGGG Gene GeneID:515988|STAT4:XM_002685461:22_cdna Constitutive 0 NULL GeneID:515988 2 GENE STAT4 MGC157175 signal transducer and activator of transcription 4 EMBV3_30070 ACCTTTTTTTTTCCAGTCACAGTATTTGTGAAAAGTAATGAGCCATAGTACCCAGTCATG Gene GeneID:524868|MED13:XM_002695603:174_cdna Constitutive 2 NULL GeneID:524868 19 GENE MED13 NULL mediator complex subunit 13 EMBV3_32974 GCCAAGTAGAGATGATATTTTGACAACCATTCATGTGATGACGTGAGATGATGCGACACC Gene BVV0102_283505 - 1 EMBV3_43524 GK000014.2:31154011-31695679 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053113 1 XLOC_031655 NonCoding TCONS_00053113 XLOC_031655 NonCoding NonCoding - 14:31602723-31667098 - TSS39251 1006 0.944333996023857 2 0.984403641221611 0.000182851657853366 0.000179793083742779 4.70816232719521e-05 0.000173347579146466 0 2.84457599832503e-05 0.000127532895455684 0 0.0001555157250479 0 0 7.10872519607959e-06 1.43457844269609e-05 0 0.000199954643403227 0 0 0 1.18569108442688e-05 2.03781332950926e-11 0.000135400284508501 0 0 0 6.85080655071982e-05 0.000220748975263207 3.49452148084564e-05 0 0 0 NM_001035051.3 CHMP3 Bos taurus vacuolar protein sorting 24 homolog (S. cerevisiae) (CHMP3), mRNA. 9e-27 125 70.93 0.285288270377734 NM_024332.3 BRCC3 Homo sapiens BRCA1/BRCA2-containing complex, subunit 3 (BRCC3), 2e-23 114 76.65 0.160039761431412 0 noncoding 0 0 0 0 0.0220276410974516 0.859178948258429 0.0120694032185292 0.826480844084796 GTGCAGAAAGTCTGCGCAGAACCGCCAATTCTTGTACCTTTTTCTGATCCCTCTTCCCCACGCTCCTGGTCATCTGCTGCTTTATTCTTTTTTTTTTTTTTTTTTTTGCTGCTTTATTCTTTATCCCATAAATTCCCCAAACCCTTTGCCTGCGGGGAGGTGGGCTTGAGATGTGTTCTTCCCTCCCTCGCTGGTCTTGCACATAAACCATCTCTTTGCTGCATATCTCTGCGTCCACATTTAACTTGCTGAGTGGCCGAGCAAAAGGAAATAACAGCAACCTCCCGCTAGATCACAACGCCTACGTCATCCACCTCACATCATCTCATCATGCAGGTGTCGCATCATCTCACGTCATCACATGAATGGTTGTCAAAATATCATCTCTACTTGGCAGCATGAAATAGAGACCCAGAATAGCTAATACTGAATACTGAAGGAAAAGAATAAAGTTGAAAGACTAATATTAGCTGACTTCAAGACTTACCATGAAGCTCAATCATAAAGATAGAGTGGTATTGATGAATGATTAGACAAGCTAATGGAACAGAATAGAGATCCCAGAAATAAATCCATATAACTATGATCAACTGATCTTTAACAATGGAGCCAAGGTAGTCTTTTCAATAAACACTGCTAGGACAACTGGACATTCATATAAAAATATCTAACCACAGGCTTCAACAAAAAATAACTCAAAATAGATCATGGGACTAAATGTAAGCTGCAAAACCATAAAACTGCTTGATAATGACAGAAGAGAGAATCGACATGACCGTGAGTATGGTGATGACTTTTAGATGCAATACTAAAGGCACACTCCAGGAAAGAAAGGATTGGTAATTTGGACTTCATTAAAATTAAAGTCTTCTGCTCTGCCAAATACAATGTTCAGAGAATGAAAAGACAAGCCACAGACTGGAATGGAGAGAACACTCACAAAAGACACATCCGATAAAAGACCGCTAGCCAAAATATGCTAAGAACTCTTAAAACTCAACAACAG TCONS_00053115 TCONS_00053116 TCONS_00053117 TCONS_00053118 TCONS_00053119 s 3' 92302 TCONS_00053115 TCONS_00053116 TCONS_00053117 TCONS_00053118 TCONS_00053119 s 3' 28565 EMBV3_14172 GCCAGTGGAGGTTCCTAAATCATGCCTTAGGTTTTGGGGTTCCCTGTATTTCATACGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09803 TTCAGACCTTGGTTCTGCATCTCAGCTTCCCTGTGCCACACTTACCTCATCTGTGCAATG Gene GeneID:512930|PQLC2:NM_001080269:155_cdna Constitutive 0 NULL GeneID:512930 2 GENE PQLC2 MGC137741 PQ loop repeat containing 2 EMBV3_26414 GCCTCCACCACCTGTTGCATCATCCTCAAATACAGGGTGTCAATCTAGACAGATCCAGAG Gene BVT0102_075079 + 0 NULL GK000005.2:109976693-109985807 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193348 TCONS_00193346 TCONS_00193343 TCONS_00193344 TCONS_00193347 1 XLOC_117443 Coding TCONS_00193346 XLOC_117443 Coding Coding GGA1 5:109960752-109982416 j TSS144510 5259 1 TCONS_00193346_3 617 0.0188248716486024 17 0.758020588099525 5.35209594140188e-07 1.31027769815929e-12 3.27724299378078e-08 0.000529168482574192 0.000800270659075211 1.26725046746838e-10 1.01107558396841e-05 3.9584773703718e-20 3.96244861854205e-05 6.37917772106654e-05 3.14720641171678e-13 2.01139726859631e-10 2.34511428028128e-05 5.88864888102607e-06 0.000370480113968838 0.000149140448683552 0.000785612309908899 0.00231971961985173 0.000159636205019011 7.6794972717048e-05 0.0010758133885535 0.000647773817103909 0.000717552830572231 0.00108830505511129 4.95390841881457e-05 2.70177841978898e-10 6.84641567277208e-07 5.65173528280314e-13 6.24215711540532e-16 2.96559692123687e-15 NM_001035408.1 GGA1 Bos taurus golgi-associated, gamma adaptin ear containing, ARF binding protein 1 (GGA1), mRNA. 0.0 2194 96.14 0.241490777714394 NM_013365.4 GGA1 Homo sapiens golgi-associated, gamma adaptin ear containing, ARF binding protein 1 (GGA1), transcript variant 1, mRNA. 0.0 2924 82.87 0.520821448944666 TCONS_00193346_3 sp|Q9UJY5|GGA1_HUMAN GGA1_HUMAN ADP-ribosylation factor-binding protein GGA1; 0.0 1092 90.92 0.99837925445705 3 coding 1 0 1 0 -0.0771844754648353 0.554823868436072 -0.0082255682249093 0.859110783088904 TGGGGGCCTGTGGCCGATGGAGCCCGCGATGGAGCCGGAGACTCTGGAGGCGCGAATCAACAGAGCCACAAACCCCCTGAACAAGGAGCTGAACTGGGCCAGCATCAACGGCTTCTGTGAGCAGCTCAACGAGGACTTTGAGGGGCCTCCACTTGCCACCCGGCTGTTGGCCCACAAGATCCAGTCCCCGCAGGAGTGGGAGGCAGTCCAGGCCCTGACGGTGCTGGAAACATGCATGAAGAGCTGCGGCAAAAGGTTCCACGACGAGGTGGGCAAGTTCCGCTTCCTCAACGAGCTTATCAAGGTCGTGTCTCCCAAGTACCTGGGTTCTCGGACATCAGAGAAGGTGAAGAACAAGATCCTGGAGCTTCTCTACAGCTGGACGGTTGGCCTCCCCGAGGAGGTGAAGATTGCAGAGGCCTACCAGATGCTGAAGAAGCAGGGGATTGTGAAGGCCGACCCCAAGCTGCCAGATGACGCCACCTTTCCCGTTCCTCCACCACGGCCGAAGAATGTGATCTTTGAAGATGAGGAGAAATCCAAGATGCTGGCCCGCCTGCTGAAGAGCTCCCACCCCGAGGACCTCCGAGCAGCCAACAAACTCATCAAGGAGATGGTGCAGGAGGACCAGAAGCGAATGGAGAAGATCTCGAAGCGGGCGAGCGCCATCGAGGAGGTGAACAACAACGTGAAGCTGCTGACCGAGATGGTGATGAACCACAGCCAGGGTGGCGCGGCGGCCCGGAGCAGCGAGGACCTCATGAAGGAATTGTACCAGCGCTGTGAGCGCATGCGGCCCACCCTTTTCCGACTGGCCAGTGACACGGAGGACAACGACGAGGCCTTAGCGGAGATCCTGCAAGCCAACGACAACCTTACCCAGGTCATCAACCTGTACAAGCAGCTGGTGCGGGGCGAGGAGGTCAACGGCGAAGCCACCGCTGCCTCTATCCCCGGCGCCACCTACCCAGCTGTGCCCACCCGCCCTGGCGACCAGGCCAGCCCGGAGCAGCCCAGCACCTCAGTGTCCCTGCTTGATGATGAGCTCATGTCTCTGGGCCTCAGCGACCCCACACCCCTCTCTGGCTTGGATGGTGCTGGGTGGAACAGCTTCCAGTCGTCCGATAGCACGGAAGCCCCAGCCCCGACTCCGGCCCCCAGTGTGGACATTCGGCCCCCAGCGCAGACACCCCCGCCCGCGAGCAGTGGCCTGGATGACCTCGACCTCCTGGGGAAGACCCTCCTGCAGCAGTCACTGCCCCCAGAGTCCCAGCAAGTGCGGTGGGAGAAGCAGCAGCCAGCCCCCCGGCTCACACTCCGGGACCTGCAGAATAAAAGCAGCTGCAGCTTGCCCAGCTCCAGTGCCACCGGCCTGCTCCACACCGTGTCCCCTGAGCCCCCCGGGCCTCCGCAGCAGCCCACGCCCACCGAGGTCTCGCTGGCCAACATCACTGTGCCTCTGGAGTCCATCAAACCCAGCAGCATCTTGCCAGTGACCGTGTATGACCAGCATGGCTTCCGGGTCCTCTTCCACTTTGCACGAGACCCGCTGCCTGGGCGCTCCGACGTGCTGGTGGTGGTGGTTTCCATGCTGAGCACCGCCCCCCAGCCCATCCGCAACATCGTTTTCCAGTCAGCTGTCCCCAAGGTCATGAAGGTGAAGCTTCAGCCACCCTCAGGCACGGAGCTGCCAGCGTTTAACCCTATCGTTCACCCCTCAGCCATCACGCAGGTCCTGCTCCTTGCCAACCCCCAGAAGGAGAAGGTTCGCCTCCGCTACAAGCTCCTCTTCACCATGGGCGACCAGACCTACAACGAGATGGGGGACGTGGACCAGTTCCCCCCACCAGAGACCTGGGGGAGCCTCTAGAACCGAGAAGGCTGGGGAGAGGAGGGGCCACTGGACTGGCTGCTGCCGAGCCTAGGTGGAGGCCGTGGCCGCCTGGGTGTGTTCCCATGGCTATATTCCCCTGGGTCTGGTGCTTCTCCCCTCACCCCTGCAGCCCCCACCATCCTTGCCCCCTCCCCTACGGAGCCAAACCCAGCAGGAGGCTGGGCCTGGGTTTGCACTGGTGGGGACTGTCATCACAGGTGGGAGCCTGGAGCAGGGAGGGCCTACACGGCCCCAGAAGGACTTGGGGTCGTGGGGGAGAAGCATGGCTGTCGGGCAAGGGCCAGGGCCTCAGGCCTAGCCCGGACCCCAGCCTGGGGAGGGGTCCTCCCTGCCTGTCTCTTATGCCTTATGGGAAGGCCCAGCCATAACTTGGGGCCGGGCTGGAGCCGGGACCAGCTCAGGCCTCCTCCATAGGAACCGGGTGACTGTGGGGGTGACGCCTGCACCCCCAGCCCTTTGCACTCTCGGGTTTGTGGTTTGATTCTCTTAGCTTTTCTCTCTGTGTGGCCCTGTGGTCACCATCTCAGGGGGCCCAGTGCGGGGAGCCCCCCACCTGTCCCCCACTCCTGGGGATCTCACTCTACCCGCCTGGCCCCTTTGCTGTCAGGCCTCTGGGTGGGGGGACTATGGGGGTCATGTGACGGCTGGCCCAAAGGTAATGCCCCAGGCGGTGCCCACAGCTGGGGGCTCCCGGGCTCCTGGCCAAGGGAGGTCCTACACTGGAGTTCTTGCGTGTCTCTTTCATTCACTGGGCTTTGTTCACCCACCTATCCATGGGCAGAAGTGGGGTCGGTGCGTGAGTGAGAGCAGGAGTATTTATGGAAATAAAACGTCCATTTTCCTGGACCAGCTGCTCTTCTGGCCCTTCTGAGAGAGAGGGAGTCAGGAAGGATCCAGGCGTGCAAGGTCCCCGGGGGCTGCCCCGCAGACTCCTCTGCCTCTCCTGGGAAATAAGGCCACGGTTCCCCTCCTCTCCGCTCCGGATCCCGGCACCGGAAGAGGCCCTGCTCGGGGGCCTGTGGCCACTGCTGAGTCACCAGAGAGAACCCGGGGGGCTGTGGGGGGCCCAGAGCCATCCCAGCTGGAAGCGAGTGGCTGCCTGGGCCTGCTAGGAGCCCCAGCTGCTGCAGACACTGAAGGGGAGGCCCCTGGCCACTCACGACTTCCTCTTGGTGCGTTCAGCCCTGAAAGCACAGCTGCAGTGCAGCACCACCCGAGGCCCCTGCCTCAGCTTCTCCTTCTCGCCAGAGGCTGCTCCCAGGGCGCAGGCGCCACCAACCGCAGCCTCTTTCCTGCAGGGGCCTCCTGCCATTGCCCGGGATAGCACACTCCCCCTGTGTTTTCGGGGTGTTTCTCTTCACTGGGAGGCTGGGGTCCCGGCCTGGGGCGTGGCTTAGAGACTGGCAGCTGAGGGAGCCAACCAACGTGCAGCAGAGCCATTGCAAGGCACCCCGTGGTAGGGAGCCCTCCGCGCTCTGCTCGCAGACATCTGGGGCAGCCTGCTCGCCACTTCTCTTTCCTAGAAGATGGTAGGAGTTCTGCTTTGAAGACTCGAGTTTTCACTTTTGTGTAACCCAGTGTTTTCCAAGTCTGAATTTGGGCGCTGAACACCGTCCTGTGGATACTGCTGGGAAGGGCTGGAGGCCAGTCCAGCCTGTGTGCTCTTTTCCATCCAGCGAATGAGGGCTCTTCTCTGCGCCAGCCAACACTAATCGCGCAGGGCAAGGGTTTCTCCACGGGGAGGGCGTGCTGTCGGCACAGGAGAGGGAGCAAGGCCTCTGAGTCCGCATCTCCAGCTCCTCACAATCAGGAGCCTCCTGTCAGATCTGCTCGATGTGACCACCATCCCACCTCTGGGCCTGCAGACACCCTGATCTCAGGCTCCTGGCTTCCTTCCCGTTCGCCTCCCTACACTCTGGGCAGGAGTCTGCCTAAACACTTAAATGATGCCTCGGAAAGATAATCTCTCCTTGGAATGTTCTTATAAGAAGAATGTTATTCTTTTACATGAGACAAAACCCTGCTCCCTGTAGCATGCCCCTAGGGTCCCAGAAACTCCCTCTAGGAGCATGTGTTCCCCAGGCCGTGGAAGGGTTGTTGTGGGCCTGGGCGCCAGCGTGACTGCCAGCTGGGAGCCTGGGAGCTCTGGCTGGCTGTGTGACTTTGAAGAAGGTGCTTCCCTCTCTGGCCTTTAGGTTCCTTGTTTGAAAAGGTGGGAGGGACCCAGTGAGCTGTAAGTCCCCTCTGAAGAATCCTTGGGCCAAAGGGCCCCCCGGCTGTCGACTTGCAGTGACCACAGGGACAAGATCTGTTCAGTCTTTTAGACCACCCTTCCCTGATCCAGTCTACCCATCCAGCTGTCCGTCTGTCCATCCCGCCAAGTGCCTCCTGAACAGCCCTGTCCTCAGACCCCTGAGCCAGGAGCATGGCCACCAGAAGCTGGAGGTGGATGGGAGGTGCTCCACGAGCTTGCATCTGTCTGAGGGGCCAGCAGGGGTGCTCTAATCAGAGGAGAGGACCCTTTGCCTCCACCACCTGTTGCATCATCCTCAAATACAGGGTGTCAATCTAGACAGATCCAGAGCCTCTGGAGCCTTCAGGCTGGGAGAGAGGGACACAAGAAAGTGTTCTCTGTCTCCTCAAGGATGACCCCCACCTCCACCCCAGGAGCAGTGGGACTTCCCAGGCCTCGAAGCCACACTTCCACTTCTGTTTGTGCCGCTGGAGGCAGCTGCTTTCCTAAGAGCAAGCACAGGACACTGCTCATCCCTTCATAGCAGCCAAGAGAGACAGAGGCCGCCACTCGCCCAGAGAGCGTGTTTCTGCTGTTCCTGATGCCCCTGCCCCCATCCTCCACAGGCCTCCTGGCAGGGTTCCAGGCCAGCAAGGTAGATAAGAGGGGAGCCGGCCTAACCTGGTGCTGCCTGAGGCCTGGAGCAAGCAGTCCCTCCCTCCAGCACCGTGAAAATAAGAAACTTGAGGCTCGGGGAGCTTATCCAGTGCCTGAGGGCACATGTTAGGGCCCAAGTGTGACCAGCAGTCCTGGGAAGTGACCACCCTGACTGCACATTACCACCCTCCTCACCCCCCGGCAGGTGCTGTCCCCCAGGTCCAGGGTTGAGGGCACACGCTCTCCAGGGCTGTCAGGACTGTGGTGTGTCCCTGCCCCAGCTCCACCCAGGATTTCCTGGTAAGTCCTTTTGGCTTGAGGGCGTTTTTGGAGCCACAGAAATGACTGCCACCCGCCTAGCTGCTTCGGGCAGAAGCCTCCACATGAAGGGCAGCACCAATCCGGCCACAAACACTTTGTCAAGTGTCTAAAAGGGGATGTTTTTGCTCGGTTCTGCGGCCCCACCACTGACCCC EMBV3_26464 GTGTAAGATAGTGCCACCCATGATTTTATGATACCTGCTCATTACGTCTTGGTTTCATGG Gene BVT0102_048281 + 0 NULL GK000010.2:88522556-88763563 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015338 TCONS_00015340 TCONS_00015336 TCONS_00015344 TCONS_00015339 TCONS_00015345 TCONS_00015346 TCONS_00015343 TCONS_00015333 TCONS_00015334 TCONS_00015342 TCONS_00015337 1 XLOC_008459 Coding TCONS_00015339 XLOC_008459 Coding Coding C10H14orf118 10:88467534-88527778 j TSS10842 6753 1 TCONS_00015339_2 275 0.0974381756256479 11 0.888086582673506 0.000128120777108714 0.000312892020241591 0.000134175557612751 5.76491887077587e-05 6.25432122268375e-05 0.000190492579346208 0.00025289634392227 1.13302360875924e-05 0.000166262432999482 3.94521576302734e-05 3.56243837298389e-05 1.61210573605556e-05 3.6772996172929e-29 0.000129971373527979 6.2907224390058e-05 0.0016988198932739 4.01552968266051e-147 5.43244412427812e-05 9.15202250696137e-05 8.58302412346612e-11 1.96729130073787e-08 0.000818715909945969 6.55520350414979e-05 0.00163921530846784 9.17363692965029e-05 0.000267682611038021 0.000156477181533162 0.000279328336561548 4.9064447220932e-05 3.8764816301892e-41 XM_005212162.1 GPATCH2L PREDICTED: Bos taurus G patch domain containing 2-like (GPATCH2L), 0.0 1.194e+04 100.00 0.980156967273804 XM_005267841.1 GPATCH2L PREDICTED: Homo sapiens G patch domain containing 2-like (GPATCH2L), transcript variant X1, mRNA. 0.0 2333 82.72 0.329927439656449 TCONS_00015339_2 sp|Q9NWQ4|GPT2L_HUMAN GPT2L_HUMAN G patch domain-containing protein 2-like; 2e-173 493 85.87 0.996363636363636 0 coding 0 0 0 0 -1.9603957683462 0.133908776158705 -0.0342254143051789 0.502964073479444 CGGCCGGGAGACTCGGCCCCGCAAGCGGCGGCCTTCGGAGGTGGCTGCGGCAGCGGGTAGATGTGGCCTCATGGATGAGCTGGTTCATGACTTAGCCTCAGCCTTGGAGCAGACATCTGAGCAGAATAAGCTTGGCGCCGGCGTAAGGTGAAGCGAGTGACGTCAGAGGTGGCCGCCAGCCTTCAGCAGAAGCTCAAGGTGTCAGATTGGAGCTACGAGAGAGGCTGCAGGTTCAAGTCGGCCAAGAAGCAGCGTCTGTCCCGCTGGAAGGAGAATACTCCCTGGACCTCATCAGGTCACGGGTTGTGTGAATCAGCAGAAAACAGGACTTTCCTAAGCAAAACGGGAAGGAAAGAAAGGATGGAGTGTGAAGCAGATGAACAAAAACAGGGCTCTGATGAGAACATGTCAGAATGTGAAACCAGCAGTGTGTGTAGCAGCAGCGACACGGGGCTCTTTACCAACGATGAAGGCCGGCAAGGGGACGATGAGCAGAGTGATTGGTTCTATGAAGGAGAATGCGTCCCAGGATTCACTGTCCCTAATCTGCTGCCCAAGTGGGCTCCTGACCACTGCTCCGAGGTAGAGAGAATGGATTCTGGACTGGATAAACTTTCCGATTCCACATTCCTTTTACCTTCTCGACCAGCTCAAAGAGGGTACCACGCTCGCTTTAATCGTCTGCCTGGAGCTGCAGCTCGATGCCTCAGAAAAGGGCGAAGAAGGCTTGTGGGGAAGGAGTCCAGCATAAGTAATCTGGGTACTGAGAGGATAGGCCACCTCATTAGTGACCCTCGGCAGAAAGATTTCTGGTTACCATCAGCTGGGAAAAGAGAACGAAATCAGTTTAATCCTCTCTCTCCCCTTTACTCCCTGGATGTTCTTGCTGACGCTTCTCACCGAAGGTGTTCACCAGCGCACTGCTCTGCCAGACAGGCAAACATACACCTGGGGCCCCCATGTTCACGTGACATCAAGAGGAAACGGAAACCTGTGGCCACAGTGTCGCTGTCCAGCCCAAATGCCGTTCACATGGATGCAGTGGAGTCAGCTACAGCAGCGTCACAGGCCCCCAGACCTCCAGACTCGGAGTGGCTGGTCAGGACCTCTGCGGCAGAGAAAGCCACTGACTCAGCTGCAGCTACGTCTTTTAAAATGCCACAGGAAAAGAGCCCTGGATACAGCTAGAACGCAGTATTTCACCCACCAGGAGCTGACTGGATGTTGTTGAAACAAATATCAGACTTTGTATTATATTGTCTTGCATATCTTAATTGACATTCCCAGCCCTTTCACCATCGGACTGACTCCTCTTCAAACAAAGAAGTGAACTCTTTCTCTTAGAAAATCATGTTGTGCAAATCTTTTTTTTTATTATTATTATAAAGGATTGAGACAGCAGTTTTTTTTAAAAAGGCCATCCAATGCTGTATATGTTAAATTGCTGTTGTTGTCCCAACAGTTACCTACAGCTCTGTTTACAGAGCTGTTGATTTTTTGCAGATATGTCCTGTTTTTCTTGAAAAACCAGTACCTGCTTTTGCGTATTTTTTGTGTAGTGCTTTTAATACCATTTGAGGAAGTTCTAAATTTGCAGTCAGTTCCAAACACAGAGTTAAGACCTGTGTGTGGAATTAATTTGCAGGAGATAAGGCTTGCCTTTGAGCTTGGTCTTTATTCAAGCAGAGTGCCAATAAGATAAATCCAGAAAGTTCTTAACTTGAAGCCTCAGAAGAGCCACCAGCAGCACGGGCCTTGGGAACTTACTCCGTTTTTCTAGATGGCCTGTTGGCATCGCCAGCAGCTGCACTGTATGTTGCCTCATCTCCAAAGTCTGTGTTCTACCCAAAGAGGACCTCTATACATATACATACAGATGGGTGTAATGAAGAAGGTCCTTTAGGTGTACAGTGAATTTAACATAGTCGGTGGATTGTGTCTAAATACTTCATGTCATGGTGTAAGCCTTTATGTACTAAACGAGACTTTTACTGTTAGTATTATAGGTCAATAACCTGTAGCAGAAATTCATACTCTATTATAATAATGGCTTCTTGGGCCCATACATTGGGGAGGAAAAATGTCTTTTCAACATGACTTTATACTTGGCGTGTTTATGACGGCTTAGCTGCCTGTGGAGTTATATATACAGCCATGCCTGAAGTTGGATGATCCTTTGTCAAAATGAGGAATACGTGACTGCCTACAGCTACTGGAGAAAAGCCACCCTTTCTAAAAAAGTATCATCAAGAGTGTCTGTCATCCTGGGACCTGGTTGGCAGAAGGGCTCTTTTTCGGTACAAATTGAGTGCTTTTATTCTGCAGTACGCAGGAGCCGTTCTCAAGTGCCCACTGCTCTGGTTGCGCTCTGGAGCAGCGCGCACTCCGGCACCTGGCGGGACAGAGCCTCCTCTCCCGGAAGCGCCATTGTGCCTCTTCTCACACAGAACGTAAGGGTGGGCCGCGCTCTCGTAGTCCTTTGAAAACTGTCATCCTCACCAGTGGTAGCTACAGAATGGCCATATCAGTGTGGTGGGTGTGAATCTGGTGGGAAAGGGGGACCGGAAGCTGTTTACGCAGCACTTTATCGAAGACTGAGAACCTGGCCGTTGTCCGTAACAAGGGATCCTGCGGAGCGAGGGGCAGGTGGAGATTGGAGTGAGGAGTAGTGCTCAAGCCAGCCCGGCTTCCCTGGGAGCCGCCCAGGTGCCCTTGTGGTGGCGCGTGTACTTCCTTGCCATTAGGCTGCACCCATCAGTATAGGGAACAATGTCTGTTGACTATAAAGTGGTTCTACTCTGTTGTTTCAGTGATGAAGTTAGCTTTTTGTTGTCATATGTGCATTCTTACTTAGTCCCAGTAGTGTCCTGAGGCACACATCTCTAATGGAATTTGTTGGATTTCAGGGAGAAATCCATGAACATAATACTTGTATTTTCTTTGCAGTAAGCTCCATGGCTCATGCAGAGATCAGTCTTGCGATAATGGCCTATTGAGACCTCTGTAGTTTGGGTAGCATCTTTTTCTTCATGACACATAACCTAATAATTCTCCTTTTTACCTATGATTAAAAGTAATTTATATGAACAGCTTTACTTACATTTTAAATATTTCTGTGACGAAAAGGTAGGTGATTACTACTTTTACATTTTATAGGGTTAAGAAATAGTCACAGAACTTCGTGACTTGCCCCAAATCACATAATCAAGCCAAGACTAAAATCCCAGACTTTCAGACTTTCTTAGTCCTGGGTTATAATCTTTTGTTTTCCATTAATAGAACTGAGTCACTCTGAGACTCATATTTTTGAAACAGTATGCCAGACAAGCTGTATATCCTCTTTCTTGATCAATCTTTCCTGAATATTTTGAATACTTTCAGCAGGGAGCACCCCAAAATGCCATGCTGTGCTGTGCTTAGCTGCTCAGTCATGTCCAACTCTTTGCAACCCCATGGATTGTAGCCCACCAGGCTCCTCTGTCCATGGGGATACTCCAGGCCAGAATACTGGAGTGGGTTGCCATGCCTTCTTCTAGGGGATCTTCCTAACCCAGGGATCGAACCCAGGTCTCCCACATTGTGGCCAAATTCTTTACTGTCTGAGCCACCAGGGAAGCCCATGAATACTAGAGTGGGTAGCCTATCCCTTCTCCAGGGGATCTTCCCGACTTAGGAATTGAACCGGGGGTCTCTTGCATTGCAGGCAGATTCTTTACCAGCTGATCTACCAGGAAGTCCCAAAATGCCATATCTACCTGTATGTAATAAGCAGAAAAGAAAATTAATTGCCTAAGAGAATAGCCATTAAGCACACAAATACATTTCCAACACAGGGTTGTAAATTGTGCTCCTTCTTTAAAGCTGCTGCATGAGCATGCTTATAGAAGACTCACTGACTTACTCTGCTTGTTTTTTGTATGAGTCCGTTCCAGAGGACTAACCTTAGAATCAAGTGTATTTTGAATCTTAAGCTTTGAATTTCCTTTTTATACAACAAAGTGTGTAATGTTACAAATTAAGAAAAATCTGTTACCTTTCAACAAAAAAATAATTTCAAAATCAAGTTTTGTAATCTGTTGGAAGAAAACCAGATAATAGCTTGACTTCCTTTGAGGATAATTTTTGAGCCCACATACGTATGATCTGCTTAAAAGTAATAACTGAAGCAGAGTTCCCCAGTTCCTCCTTATTTCAGGTTTCAGATTTATCCCAGCATGCTATAGTCTGCCTGTCTAGGTCCTAGTCTTGGGTATTTTTCACAATGGACGAAAGTCAAGACATTGTCTACTTGCCTGAGCATCTTTCATAAAGGATAGTTCTGCTTACAGGTTCAAGGGAATTGAAGATTATATTTCAGATTCAGTGTTTTAAAGGAAACAACTTCATTTGCATCCGAAGTTTTGTTGCATTTTGATAACTATTCAGAAGAAATTAGTAGCTGGTTTTTGGTGCCAAATTTGGAGGAGCAGAGTATGATCTTTGTTGAGTGGTGTGTTCTTGATAAATAGGCCTTGAATTCTATAGAAATCAAGCATAATTGGAAATTTCAGGTGACATTGTTTTGCTGGGCTGTACAGACAGGCTGCAAAAAAGACCTGTTTTGGCAACAAAATGACCAAAAGCTGAAATAAAGATTCTTAATTGGTGATGTTTATGGCATCCTTTGCTAAGTGCAGCTCAACACCTTGGACAGGTAATTAAACTATTTCTGAATCCCAAATGGATGAATCTGAGATATCGCTGCATTTTGGAACCAGAAGTACAGTCTAGACCACAGCACAGCAAGTTTTGATGCTCCAAGTACAGGAGCAGAGTTATCACAGAAGTCGTCTAGAGTCGAACAAATCACAGTGTTGAGCAAGGAAGCCAGGTGAGCACTGTCATGGCTGGTGTGATGGGTTCCCCACTTTGGCTTAAGGCAAAGTCTCCTGGTGATGCATGATTCGTGTCAAGTCTTTGCTTTATTTTGGCTTTTACTACATGATTCTGAGCCACAAGCTTTTGTTTCCTGGGGATCAGGCTAGGTAAAAATCTCAGTGTTAGAATCCGTATTCAGCATTCTATATTTGGTGAACCTTACCTTGAACTGGGATGAGAGCAGAGTGACGTTCTCCGGCAGCTGTGGCTACATTCTATTTGGGGCATAGTTTATAGACTGTATCATGGTCCGTATGATGGTGGGAGGGGTGGTGGAAGCAGATTGCTCTTACTGTCAGCTGCTTCCTTGGTTACTGCCCATTTTAGTTGTCAGTATTTCCTTATCTCCTGATCTCCCACTCTAGTCGTGACAGTGAGTGGAGTGACCAACATGACAGCATTCGGGTTGGGTTTCTACCCCATTAGAAAACTGGCACAGAGTGGGAAGGTGAGGAAGTTGGTGGATTCTGCTGTTAGCACTTGGAGAAGGCAGTGGCCACCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTGGGCTGCAGTCCATGGGGTCACAAAGAGTCAGACACGACTGAGCGACTTCACTTTCACTTTTCCCTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGCGGAGCCTGGTGGGCTGCTGTCTGTGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTCAGCAGCAGCAGCAGCTGTTAGCACTGAACACAAGTGGTCCAGTGATGCCTTCATCTACGCTGAGGTCACAAAACATGAACATCAAATGCCTACAGATAGCAACGTTGAAAAGAAACAAGGATATCGAATAATCTTGGCTGAAGAGTGTGGATTATCAAGTTTGTAAGAAGCTCAGCAAAACAAACTCAATGGCCCGAAGAAGACATTTTCCTGCCACTGCACTAGGTAAAACTGCCAAATGTGAGGAATACATTTTTTAAGCACAGTATTTGAAGAGTGGGGCAGGTCCTGAAGATGTTCACCAAGGAAAAGGATATTGGCAAGATCCAGAGTGAGAAGGTGAGGAGAAGAGAAGGAGACGCATGGGGTAAGCGGACTAGGACCCTGAGACCAACAGCACCCACACATTCTCTGCCAACCAGATCGGCTGAATCAGAAGCTGAGGGTGAGGCCCAACACTCTTCCAAGCCCTCCAGGGGATTCCACATGACGTGTTAGAACTGCAGGCTTTGCCGTAGTTGGAAAGAAGTGTTTTAATATACTGGTATCCCCCCTAAGCTCTGAGGTGCTCTTATACTTTCCTCCATAAGTATAGAAATGTTTTGTGTATGGTTCTTTGCAGAAACTATTAAATGTCTTTATTTACCATACTTTTCCCCTCAAGGTCCTAAAAGATCTGGAAATACTGAGATAGGATGATGTGGAGAAAAATGCCATTGAGGTCGTTTTTAGATGGATGGAAAACAGCTCTTTTAAAAAGTGGATTAAAATACAACTGGATTTTTAGTCTGTGAGTGATAAGTTGTTTTTCGCCATTGACAGTAAAACATTTGTGTAAGATAGTGCCACCCATGATTTTATGATACCTGTTCATTACATCTTGGTTTCATGGGAAAATGTCATGTATTTTCCAGCATCATAATGAAGAAGCCTTTAAAGTGTGGCTCACAAAAATGAAAAAAAAGGGGGGGATCCACCTCTAATACATAGCTATTGTGTAATAAATACCTGTTGGGTTATTGGTTGTCTTTTGCTGGGAATTAATCTCAGTATTTCAGAGCATGTAAAAATCAATTTTCAGTGATCTCAGTTAA EMBV3_22968 CTGCAGCCGACGATCCAGAGAACAAAAAGACCACATCACCCTCCAAGATGGGTTTCATCG Gene GeneID:614777|CDC14A:XM_002686168:323_cdna Constitutive 1 NULL GeneID:614777 3 GENE CDC14A NULL CDC14 cell division cycle 14 homolog A (S. cerevisiae) EMBV3_22718 GCAGTAGGAGAGGGCGCAGTTCTGTATGAAGACCTATATGATGAATGCGCGATCCAAAAA Variant GeneID:281630|APEX1:NM_176609:16_cdna 301^962 1 EMBV3_26199 GeneID:281630 10 GENE APEX1 APEN BAP1 MGC139790 APEX nuclease (multifunctional DNA repair enzyme) 1 EMBV3_05093 ATTGATCCACCTTTGTACATTTTCATTCTATTTCATACATCTATCTATCTCCCACCTATC Gene BVT0102_313604 - 1 EMBV3_22002 GK000015.2:34139762-34207051 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018481 TCONS_00018482 TCONS_00018480 TCONS_00018479 1 XLOC_009264 Coding TCONS_00018482 XLOC_009264 Coding Coding GTF2A1 10:93614166-93647863 = TSS12427 5142 1 TCONS_00018482_5 337 8 0.847637701804368 0.00206711044725576 0.00196409823865097 0.00159080220799693 0.00178055976164952 0.00210019812573715 0.000905449425782621 0.0026511548503162 0.00268041748252107 0.00411097866260346 0.000862274761551413 0.000437138509521969 0.000280738975830472 0.000534704249941741 0.00114853413976698 0.00113857208607827 0.00221668078628631 0.00089208392688942 0.0016936415383336 0.00189838773347868 0.00251852880796734 0.00120883314905386 0.00131258371393465 0.00156870039971961 0.00125265535200889 0.00300152845116811 0.00190170156971766 0.00184742705364213 0.000383828935555937 9.37964166763604e-05 0.000234397806796925 XM_005212232.1 GTF2A1 PREDICTED: Bos taurus general transcription factor IIA, 1, 19/37kDa (GTF2A1), transcript variant X1, mRNA. 0.0 9274 100.00 0.999805523142746 NM_201595.2 GTF2A1 Homo sapiens general transcription factor IIA, 1, 19/37kDa (GTF2A1), transcript variant 2, mRNA. 0.0 5790 85.16 0.99902761571373 TCONS_00018482_5 sp|P52655|TF2AA_HUMAN TF2AA_HUMAN Transcription initiation factor IIA subunit 1; 0.0 667 99.11 0.997032640949555 1 coding 0 0 0 0 0.18532412056065 0.40235974883031 -0.045496957325361 0.625134090249204 ATGGAACTAAAAACTTTATGGGAGAATAAACTAATGCAGTCTAGAGCGGTAGATGGATTTCATTCAGAAGAGCAGCAGCTTTTATTGCAAGTTCAACAGCAACATCAACCCCAGCAGCAGCAGCATCATCACCATCACCACCATCAGCAAGCTCAGCCTCAGCAGACAGTGCCTCAGCAAGCGCAGGCCCAGCAGGTCCTTATTCCTGCTTCACAGCAAGCTGCAGCACCACAAGTTATTGTTCCTGATTCTAAGCTGATACAACATATGAATGCATCAAACATGAGTGCTGCTGCTACAGCTGCAACCTTGGCACTCCCTGCTGGTGTGACTCCTGTTCAACAGATATTAACAAATTCAGGCCAGCTTCTGCAAGTGGTCAGAGCAGCCAATGGTGCCCAGTATATCTTTCAGCCTCAGCAGTCAGTGGTTCTGCAGCAACAGGTTATACCACAAATGCAGCCTGGTGGAGTACAAGCTCCTGTTATACAGCAGGTCTTGGCCCCTCTTCCTGGAGGGATTTCACCACAAACAGGTGTCATCATCCAGCCCCAGCAAATCTTATTTACAGGAAACAAGACTCAAGTCATACCTACAACAGTGGCAGCACCTACACCAGCACAAGCGCAGATAACTGCCACTGGCCAGCAGCAGCCACAGGCCCAGCCTGCTCAACAGCAGGCTCCGCTGGTGTTGCAAGTTGATGGAACTGGGGATACATCATCTGAAGAAGATGAAGATGAAGAAGAAGACTATGATGATGATGAGGAGGAAGACAAAGAGAAAGATGGAGCTGAAGATGGGCAAGTAGAAGAGGAACCCCTCAATAGTGAAGATGATGTGAGTGATGAGGAAGGACAGGAACTCTTTGATACAGAAAATGTTGTTGTGTGCCAGTATGATAAGATACACAGAAGTAAAAACAAATGGAAATTTCATCTCAAGGATGGCATTATGAATCTTAATGGAAGAGATTATATATTTTCCAAAGCCATTGGAGATGCAGAATGGTGAAAAGAGTTGGTTCATTTTCTTTTATAAATAAAACAAAAGAAACTTAAAAAAAAAATTTAAAGTGGACAGTTTGAAACTTGGGACATATACCAACCAAAACTTAACTTCTGCATGTCAGAAAAGTGCAGTAGAAGCAGAGCTACTGGAACAAAGAGACCTTGACAACACAGACACTACTTCTAACTGGCAAGCCATGGAACTGTAGCACCTGGGGTTGTTGGGGTGGGGAGGGTGGGGATTTGTGTAAGAAAACCAGAGTTGTCGATTTTAAATACAGGTACCTGCCACTGGTGATTAGCATGTAAAGCTTTGTTTATATTCCTTCCTCCAACTTGAGTTCAGCCAGAAGATACTTGTTGGAATGAACTGAAGAAACTTCCCTTTTGATAGATTGAACTGAAACTGCTTATTGTACGTGGTTATATTTGGTAAAAATTGCGTGTTGAGCTTTTTACAAAAGGGTAAGAATTATGGTGTTGAATTTTAATTCACTTGTATAAGGAAACAGTTTAGAACTCTTATAGGTCTTAAATATTTTTACTTGCTGTTCTCCCTCAGTAATATATACCTCTTCCTTCCCTGCTTGATGAAACATCTATTTACAAGTTAAAGGAAGTGTATAATCAGTAATTACATTTTGGAGACAAAATTTACCTAGGCGTGGATGTTTATTTTAATTAGGTTTTCAGACTCATTATAAAGACTTGGGTCTTGTCTGAGTTGAGCAGAATTAAAATGACAACTTCAGTTTCCTAACAGAATTGTATTTGTTTCTTTTAGTCCCACACCTTAAAAAGAAACCCCAAGTGGCTCCTCAGGAATGCAGTTTTGTTGCACACAGGTACCATCTAGCTGGAATTATATACATATGAATAGATAATTTTCCTGTTGGGCTGAAGTGTATGCTTATATATATGTTTAGTCTTTAAGCTAAACAAACATTTAGATAACATTCTGTGCATTGATTGATGCATTGGGCAGGTGGTGAGGACCTGGATTTTTATCAAACAGTTTAGTAATTTTAAAAGTTTCTTGTGTTTACTAGTAAAGAATTTTAAAACTCTTATTCTAATTGAACACATTTTTTAAAATGCAACTTTGTAATTTGAGGAAGAAATTTTTGGGGTTAGAGGAGGGTGGGCCACTAAGTACATACTTACCTCTCTTGCACTGGCCCTTCCAGGCCGCTGATAATACAGACATGGGCTCCAGTTTGCACATCGGGAAGACAGCATAGAAATTTGACTTGTATATTAAAAACAGTAGAAATGTAATATGTATATGAAGAATGCATAGCTTTGTATTCTGTAAGGGGCTCTAAAGAACGATGTGGCAGTGCTCTATGTTCAGTGTGAACGAGTTGCTTGGGAGAATTGCAGGAACACGTGTCCTCACCTTTGTTCTTAACACCTAATTCTTTTCATGGTTTATTTTGACAAAATTCACATGTGTTTAACTTGTATATTGATTTTTTTTTAAGTCTTCCACTTTTGTCTTCCTTTTATTTGCCTTTGTGTTTCCAGAAGTAACAGAGAAACACTTTAAAGTACGTTGCAGAGAAAAACTGTGAGCTGTTTTATATTGTTTTTTTTTGTTTTTTTTGTTTTTTTTAGCACAAATCTTTAAACTTCTTGAAAAGGCTAATTTTTTTTTTTTTCTTTTGCCTACTTCCCTCCCAAAATACCACCTTGGTCCCTTTAACTTATGTTCTGAACTTTGATATAAATGGTGGTTTCTAGCATGCTAGTAGTTAGATTTATTTCGATGCCATATCTGGTGATACGGTTTTAATTTTTACTATATTAGTTTTTTGGAGGTTTATTTGTTTACCCCACTATGCTCAAAGCACACGCAGGTTTTTTGCTTTGTTTTTTTTGAGCCTGGGAGGAGAGAGGAAGGGAGTAAAATCACAGAAGTCCTGTTGTTCGTTTGTCCTTCAGTATAGTTGCTAGTAGGTTTATATTTACCTGGTGAAGAAGTCAGTGACCTGAACTACCTATAAAAGTTTAGCATTGCTGCAGTGTTGATTGAAACCCTTTGGCTATCTAGTAGTTCTTACGCTACTGAACCTTGGATTACTATATGATACTCAGCTTATATTTTGGACTCTATGTAGACAAAAACATTGTATTCATAATAGAATTGTATACTAGCCTGTTTTTATAACATTGAAATATGAACAACCACTGCTTTCAGTGTGACTTAGTAGGGTTGTTTTGAAGCAGGAAATAACCATTTATATTTGCACCTGTGTATATTGCATATCAATTATAACATACTTGGTAAGCGCTTTTCTTTTACCTGTGAAAATTCTGAAAACTGGTCCAAACAACACTGCATACCAAATTGTGCTCTTATATATCACTGCATTGTGTTCCTTTACAGTCAAATAGCATGTTTTAGTTTTATTATAGTGGCTTGCTGTAAGAATGCCACTTGCTTATCTTTTATTGTACTTGAATTGTTAATCATGCTTTTAACATTTTATTTAACATCATTTCATTAGGTTCCATTAAAAATGTCATTCCTTTGAAAATGCAAGGATTCCCACTTTCAAAATTTTGAAGTAAAGATAACGTTTATTCAAAGAAGGAAAATAGTTCAGACTTGGTATTATGAAATAAGTGAAGGTTTCAGAAAAGGATTTGTTTAGATTTGCACAGATGATGATGGCACCTTTTATTAAAAAACAATCAACAGTGCTAAGGAAAATTTACACAAAAGTACTAGGTTTAAGTGTGAAAATGTGTGCCTTTCAGTGTATGTACTCTTTTTTTTTTTTTTTGGTGGTCATTTGGATAATCAGACCATTTGAATGGCTGAGAGCACATTTAAATTCTGTGGAGTGCCACATTTGGCTAAAACAACTCTAATGTGCAATTAGTTTCTGGACTAAAATGTCTGTTATATGAGGGGGATCTTTATATTGGGCTTTTATATTTTTTTAAATGTTCACATTTCTTTCTATTAAATGCCATCATAGCACCACATTTATATTGTTGCCTCTTAAAATCAAAGCCACCTTGATGATGTTCTTTTTGGCATGCATCAAGATTTGAGCAGTGTGTATAGCGATTAAAATGTGTTCTTGAAGAGCATAGTCTAATAGACTCTGGTTTAGACTGCAAGAACATAAAAATAAAAGTATAATAGCTTTTGTATAAAGATTTTCTTTTGCTATATGAAAATCAAGGATTTGGTTTGCTTTTTTTCTGGCTTTTATGGAGGAATGAAAAGTGTTATCTCCTTCTAAGAGTAATTTTTGATTATCTTATAGCAATAATGTCACCATTCTTTTCAGAAATAAATAAACCTTGTATAAGAAATCAGACATAATTTTCTTGGGAGCTCCCTTTATATCTTAGCTTTTTCTTCCTCTTAAGAAAATTCCTGTATTTTCAGATTATTTCATCTTGAACTTTTTGAGCTTTTGTGCAATGTAATATTTTATTGATCCACCTTTGTACATTTTCATTTTATTTCATACATCTATCTATCTCCCACCTATCCGTCTGAATCGGCTGTTTCAGGTTTTTAATTCATTGGTTAAAAAATAGTTGCTTTATATATTTCCTCATGGGTTTATGTTAAATAGTTTTGCATTTTAATCTATTATGCTATGGAAATTATTCTGAAGTTTGTATTCCCTTTTTAAGTCTGCCTTAGTCTATTTTTTGTCATTTTTTATGGTTTAAGGAAGAACACACAGAACTTGAAATTTTTATTTTGAGGAACAAGAAAAATTGTTTTTTTCTTTTAGGAGAAGAACTACACTGAGTTATTAACTACTATTTCAAGTTAAGTTTCCTTAAATCATCCGGTATGCTTCAGGGCTACAATTTGGGGGGAGGAGCTAATTCTTTTTGCTGTTCTGAGCTACTATTGTCAACTGCTGTTGTACATACTGTTATGTGTAAGGGCGTAAATATATTTATTATGTTTGTAAAATTCATTCTGTACAATTGCAGATCAAGGTTGCTCTTCTGTGATATACGGGATATTATGTTTTAAAGACCATCTTGGAATACAATTAGAGAACTTAGTATTTTGATGTACTAAGACCTATTTTAAGTTTAATATTTTACCTTTGCAAAAACTTTAATTAAAGATGTTATTTAAAAAAAGTAA EMBV3_26563 AAATACGTCCCACCACGCTTGGTTCCAGTGCATTCGTGAGCTAAAGGAGCAGTACTCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33057 GTCAGCATTTGCTTTACTTACGTCTACAGTTCTATCTGACCACACCAAGGTAGGCCAGGC Gene GeneID:535493|LRIG2:XM_002686138:239_cdna Constitutive 0 NULL GeneID:535493 3 GENE LRIG2 NULL leucine-rich repeats and immunoglobulin-like domains 2 EMBV3_27308 AGTACAAGGACAGCGCTTGGATCTTCCTGGATACGGAGAGATTGTTAACATTAATCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23332 GCCAAGTTATGTTCAAGTCTGGAAGTTCATCTGGAGTTAATGGCATCTCAGTGGGCAGGC Gene BVT0101_002145 + 0 NULL GK000003.2:83946500-84099550 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21214 CATGAACGAGATCACAGAGAAGCTCACGCTGCCAGACACCTGTCGGAGTGACCACGTTGT Gene GeneID:784163|LOC784163:XR_084634:30_cdna Constitutive 0 NULL GeneID:784163 21 PSEUDO LOC784163 NULL similar to AP-3 complex beta3B subunit EMBV3_20056 GGCCTGTTCCATGTGTTAGGTCTCAGGCTTGGTACTGCCTGACTTGAACTCTCAGTGACT Gene GeneID:512371|ANO9:XM_002699414:68_cdna Constitutive 0 NULL GeneID:512371 29 GENE ANO9 TMEM16J anoctamin 9 EMBV3_08573 GGAGCACTTGGGTTCAAGAGAGAGAAAGCTCTGTGGTCACAAATCCACAAGCAGCATCTG Gene BVT0102_052755 - 1 EMBV3_13136 GK000005.2:64856204-64962167 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24630 TGTTGGAGGGCGGTACTTTACCACCACACGGAGCACTTTAGTGAATAAAGAACCCGACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43438 AGAGTTCCCTACATTACTATGATGAGAATACACAGTTCAAGTACCCGCTGGGGAGAGATG Gene BVT0102_295804 + 1 EMBV3_02219 GK000010.2:202004-238869 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33865 TGGGACTCTCTGCTCCCCCTTCTCCTGGGACATTTGCCTTTCTGTATCCCATTTGACAGT Gene BVV0102_313408 - 1 EMBV3_29570 GK000011.2:427686-483847 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21925 CAACAAGCTGCAGTACTGGCTGCACACGAGCCAGAGAATTCATCGCGCCCTCAACACAGA Gene GeneID:616000|GRIN3B:XM_002689168:207_cdna Constitutive 0 NULL GeneID:616000 7 GENE GRIN3B NULL glutamate receptor, ionotropic, N-methyl-D-aspartate 3B EMBV3_04487 AGGGGCCACCAGTCGCACTGTACCAAAGGTGAAGATAGCACACGATCCTCCATAGAAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41657 CGCAGATACGAATACGACCACTGGGATGCGTGCATGTGCTGGACCTAGAACCTCAGGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23246 CACAGTCTAGTTGCCAAGTGGAACATTCTTAAAAAGATCATTCAGAAGTTTAGCAGAATT Variant GeneID:538509|C13H10ORF97:NM_001076107:136_cdna 522^573 3 EMBV3_10775 GeneID:538509 13 GENE C13H10ORF97 MGC139777 chromosome 10 open reading frame 97 ortholog EMBV3_13044 GACTACCAGACTGTCACTCAACAAGAATTCCGAGACCTCTTTTTATATGCTGTGGAGCTG Gene GeneID:521683|PKD2L2:NM_001038552:31_cdna Constitutive 0 NULL GeneID:521683 7 GENE PKD2L2 MGC133828 polycystic kidney disease 2-like 2 EMBV3_10372 CCATATGCCGAGCTCATGATGTATAGAGGTCTGTTTGTCTGTCTTGCTTCTGACAGGTGC Gene BVT0102_085922 + 0 NULL GK000010.2:37025486-37035179 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013514 TCONS_00013510 TCONS_00013511 TCONS_00013508 1 XLOC_008143 Coding TCONS_00013510 XLOC_008143 Coding Coding RTF1 10:36980537-37027438 = TSS10015 4786 1 TCONS_00013510_2 714 18 0.898336886993603 0.000446915792689631 3.2014624775854e-05 5.68118507435415e-05 2.90833841412839e-05 1.38440667219035e-46 1.31884684281356e-10 3.55480032568089e-11 1.22344749546589e-19 2.56663037610152e-08 1.84366117620768e-40 4.18858241253538e-11 0.000987419236269927 0.000331008303652389 1.28794706608384e-16 1.26877410539318e-08 0.0064338429494859 0.00340581103286847 0.0039490998253139 3.55222008470267e-17 0.000103193195652808 2.88449901718102e-11 0.000156723465795464 0.00245997974331737 0.00536444660996974 5.51028127347858e-07 9.28486487921169e-39 0.000485191187254828 0.00118535310460333 0.00157821889663881 1.84442771610875e-11 XM_005211566.1 RTF1 PREDICTED: Bos taurus Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (RTF1), transcript variant X1, 0.0 8421 99.24 0.991015461763477 NM_030112.2 Rtf1 Mus musculus Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (Rtf1), mRNA. 0.0 4488 81.92 0.963643961554534 TCONS_00013510_2 sp|A2AQ19|RTF1_MOUSE RTF1_MOUSE RNA polymerase-associated protein RTF1 homolog; 0.0 1159 96.50 0.99859943977591 1 coding 1 0 1 1 -0.0520868080045877 0.617471439721901 -0.0181506422609464 0.728699453023787 CGGCGAACGGCGTGCGACGAGCGGGGGGCGGGGCCAGGGGCGGAGCGGAGCGCGCATGCGCGGTCGCCTTTGTGTGGGTCGAACAGCAGCAGCGGCGGCGGCGGCGACGGCGGCAGTGGCGGTCCCACTGGCAGGCGGGCAAGAGGGGAGTCCGGGCGGCGTCCGGCGTGGGAGCCGGGGGACCACGATGGTAAAGAAGCGGAAAGGCCGCGTCGTGATTGACTCAGACACGGAGGACAGCGGCAGCGACGAGAACCTGGATCAGGAACTCTTGTCCCTGGCAAAGCGGAAGCGAAGTGACTCTGAAGAAAAGGAGCCGCCCGTGAGTCAGCCTGCTGCCTCCTCAGACTCAGAGACGTCTAACAGCGATGACGAGTGGACTTTTGGGAGCAATAAAAATAAGAAGAAAGGAAAAGCCAGAAAAATAGAGAAGAAAGGAACCATGAAGAAACAGGCGAATAAAACTGCTTCCTCAGGCAGTTCGGACAAAGACAGTTCAGCGGAGAGCTCAGCTCCTGAGGAAGGTGAAGTGTCAGATTCTGACAGCAACAGCTCCTCCTCCAGTTCAGATTCAGACTCTTCCTCAGAAGATGAGGAATTCCATGATGGCTACGGAGAAGACCTCATGGGAGATGAGGAAGACAGGGCCCGTCTGGAACAGATGACAGAAAAGGAGAGAGAACAAGAACTGTTCAACCGCATAGAGAAGAGGGAGGTGTTGAAAAAAAGATTTGAAATCAGGAAAAAACTGAAAACAGCCAAAAAGAAAGAAAAGAAAGAAAAAAAGAAAAAGCAGGAAGAAGAGCAGGAAAAGAAAAAACTGACACAGATTCAAGAATCTCAGGTAACATCCCACAACAAGGAACGACGCTCCAAACGGGATGAGAAACTAGATAAGAAATCTCAAGCCATGGAGGAACTAAAGGCAGAGCGAGAAAAACGGAAGAACAGAACAGCTGAGCTCCTCGCCAAGAAACAGCCATTAAAAACTAGTGAGGTGTACTCTGATGACGAGGAGGAGGAGGAGGATGACAAGTCCAGTGAAAAGTCAGACCGCTCATCCCGAACAACGTCATCCGACGAGGAAGAGGAGAAAGAAGAGATCCCTCCAAAATCACAACCGGTCTCCTTACCAGAGGAATTGAATCGCGTTCGATTATCACGGCATAAGCTGGAACGTTGGTGTCATATGCCCTTCTTCGCTAAAACAGTCACAGGATGCTTTGTACGGATTGGCATCGGAAACCACAACAGCAAACCAGTTTACCGGGTTGCTGAGATCACGGGTGTTGTGGAAACCGCCAAAGTTTACCAGCTTGGTGGCACCAGAACAAACAAAGGGCTACAGCTACGGCACGGCAGTGACCAGCGAGTGTTCCGCCTAGAGTTTGTCTCAAACCAAGAGTTCACTGAGAGCGAATTCATGAAGTGGAAAGAAGCGATGTTCTCTGCTGGCATGCAGTTGCCCACTCTAGATGAAATCAATAAGAAGGAATTATCTATTAAAGAAGCTCTTAATTATAAATTCAATGACCAGGACATTGAAGAGATTGTAAAAGAGAAAGAAAGATTCAGGAAAGCTCCACCCAACTATGCTATGAAGAAAACGCAGCTTCTGAAGGAAAAGGCCATGGCTGAGGACCTGGGGGATCAGGACAAGGCCAAACAAATCCAAGACCAGCTGAACGAGCTGGAGGAGCGAGCAGAGGCCTTGGACCGCCAGCGGACCAAGAACATATCTGCTATCAGTTACATCAACCAGCGGAACCGGGAGTGGAACATTGTGGAGTCTGAGAAGGCCCTTGTGGCTGAAAGTCACAACATGAAAAACCAACAGATGGATCCCTTTACCAGGCGACAGTGTAAACCTACCATCGTTTCTAATTCCAGAGACCCAGCTGTTCAAGCTGCCATATTGGCCCAGCTGAACGCAAAATACGGTTCTGGAGTGTTACCAGATGCTCCAAAGGAAATGAACAAGGGTCAGGGAAAGGATAAAGATTTGAATTCTAAATCAGCCAGTGATCTCTCAGAAGACTTGTTCAAAGTACATGACTTTGACGTGAAGATTGATTTACAAGTCCCCAGCTCAGAATCAAAGGCCTTGGCCATCACCTCCAAGGCTCCGCCGGCCAAGGATGGAGCTCCGAGGAGATCTCTGAACTTGGAAGACTACAAAAAACGACGAGGGCTTATCTGAGCACGCCCAGCCTGCTGCATCTGACCCCGCATGCCCATCACAGTGTCCCACTTTTCCTCCTTTCCTCTGATTTGCCCTCACTGGGCTGGAGCAGCAGGAACTGGGAAGAGACTCTAAACTGCCAGTCATCTGTAATATAAACCATTTGCTGTATAGACTTCCCTGGTCTGCAACATCTCCACCGACCCCCCAGGACCCACCCAATGTGAACCTGGGCTCTCTTGGGCTTTATCCATGTCTTTAGATTTGTGTTTGCCTTTTTCTTTTTTTTTTTTTTTAAACCACAGTTCATTGGCCACTCTGCACGCATTCAGTATTACCGTGGAGCTGGGGTTCCTGCTGGAGCCCCCAGCAGCAGCACTGGGCAGCATCCTGTGCAGGATGGCCCTGGGCCCAACCATTGAACATTTGGCCCCCGGCCCTGGTGGGGGGTGGGGGCTGGGCACCCACAGTCCCGTCTCCTCTCTCTCATCTTTCTCTTCTTCCGATCTTGTGGAAGAAGGGTTTTGAAAACCCAATTTAATTTCCAAAAAGTGTACATTTGTGGGGAGGGAGGGGGTCTATTTGAGAGAGAGTGTGTATGTGTGTATGTGTCTGTAAGTGTGTGGATTTTTTTATCATTTTTTTAAAATGCAGTACTCTTTGTATCTGTCTGTCATGGGGCTATAGCTGTTTCAGATTTTTTTCAGCTGTACTTGAGCATCTGAAACTGCAAGAAAGAAATTCATTAAATGTGATTCTTCTTACTAAACAGTCCTGACTGCTGTAGCTGTGTAACTTCTCCCCCACCTCCTCTTTCCCATCACCCTCCCACCTCGGAGAAATCTCCCCAGTTTGGCCCCTGCCCTGTCAGCTGTGTCCTGGCAGGTGGGAGGGAAGCCCATGGCTAGGTACTAGGGAGGTACAGGTGTCTTGCTCAGCCCATGTGTTCAGCCCACAGCTTCTTGGCTGAATGTAGAGTGTGTCTTTTCCCCGCCCCATGTACTTGTCTCTTCCTAGTGATTCTGTTTTGCCGTTTCAGCAAGAATAATATTTTGTTCTGTTTTTTAAGAGAAAGTATTCAACATGAATGTGGAGAGAACGAACACAAAGATATAGGTTGCAGATGTTACAAGCATGTGCAGTTCTGTGTGTGTGTATACATATATATGGTAAGCATATATATTGTTGTGCAGCTAGGGTGAAGCCAGCAAAGAAGTATGTATGTCTTTATAAAATGTTTGCAAAGAGATAAGCTGACTGCTTGATAATCATTCTCAGGTGTAAAGCTCCAAGTGTAAATAAAAGTGGCATTTAACAAATCTTTTCAGAACAAAGTACAGCTGACTATATAAAACAAGAACTAAGCTAAAGGAAACAGCTGAGAGCTGCTGATTCCCACAAGAGGGAGAGGAATCTCAAAGCCCTGCCTTGTATCTCTTCACCCTACTTTCTATAAGAAAGTGGGATGATGGGAAATCATGGATTAAGTTGTATTTAAACAAAAAGGAACTTGGTAACTCTTTTGGGTTTAGTAGAGCCTCAGTGTTGCTTTAACTTAGTTTACACTTTTTTTATTTAAAAAAAAAAGCAGCAATGTTTTTTTTAAAAGAATTGTGACTGTAAAATGGATAAATATGACTGTAACACAGCTATATGGTGGCTGTGACAGTTCAGTTGGGCAAAGGAGTGGTGGTGGACTCATTAAAATCATATATACTTGAATAGTCCATTGACCAAAACTCTTTATAGACTGTTGTGTAAATGTGGAATCACAGACTGTTAAACATTGCCTGGACTCCAGAAGAGTCCTGGAGGCTGCTGGGACCTCTCGTATCATGACAAACTCGGACTTTTTCTTTCTTGTTTTAAAAGACACGAAATGATAGAATCCATATAATTTGCTGGAGACATTCTGATCCACCATATAGATCTGTATTTAGTATCATTTGGATTTGGAGAAGTGTCGGTTACATTATGGCTGTGTAATAAAGTTTTTATTAAAACTGCATCACACTGTAGCCACTGTGCCACTACCTCCCCACACGCAGCTGCTGAAACTTTCGTTCTGAGACTCCAGAAACAGCAGGGAGCAGAGCCAACCAAAGAAGACCGACAGTTAACTTCTCACCTGAGTAGCCCATTTTGGTGATTGGAATCAAGACTGAGGACTTGTCTGCAGTCTCAACTGAGGCAGGGCCTCTGAACTGAGATCTTGACCAGGCATAATACATGGGCTTTATCCCACCAGCGGAGCTGCTTGGAGGTTCGAGGTGCCGCTTGTGCTGGGGAAGGCAGCAGGGGCCCACAGCTCCACCCCCACCCCACCCCCCAGGTGGTTTCAGTGTTGAAGGGTGTGGCACCTAAAACTGCTTTATACATTTTTCACTTCCTTCCAAGAAGCAAAAAGGCCAATGTCCATATGCCGAGCTCATGATGTATAGAGGTCTGTTTGTCTGTCTTGCTTCTGACAGGTGCAGGGAAAGTCTTCCTGCCTACAGCTTTCCTTCAAAGAGAATGCTTTTGTTTTGTTTCTGTGAAGTCCTGACCTGTCACTCAAACTGTACAGATATTTGTAAATAAACTTTATGCCCTGTTTTAACAAGG EMBV3_29878 TGCCTACAGCCACCTGGCACCTGAGGAAAAGCCCAGAGATGAAAGGAACCTGAAGAACAA Gene GeneID:404192|ASIP:NM_206843:826_cdna Constitutive 0 NULL GeneID:404192 13 GENE ASIP NULL agouti signaling protein, nonagouti homolog (mouse) EMBV3_02030 GTTGTCATTGTGCCTCATGTAATGACTCTCCAGCTGCCTTTCTGCGCCTCCAACATCATC Gene GeneID:788242|LOC788242:XM_002687616:737_cdna Constitutive 0 NULL GeneID:788242 5 GENE LOC788242 NULL similar to olfactory receptor 820 EMBV3_32923 CTCATCCCAATCTGTCTTTTCTGAAGGAGCAAGGGTGTTACCTGGGCCATAACTCAAGCC Gene GeneID:539073|OSGIN2:XM_002692849:246_cdna Constitutive 0 NULL GeneID:539073 14 GENE OSGIN2 NKX1-1 oxidative stress induced growth inhibitor family member 2 EMBV3_42770 AGAGGCTAAGGTAGCTGTTGCTACGGTGAGGTAAAGGGAGCTTGGGGGAAAGTCGCAAGG Gene BVT0102_147781 - 1 EMBV3_22084 GK000003.2:104402293-104477698 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20255 AAACCTACGTGTTTGCAGCTGGAGTCCATAGCCAGTTGCTGCCTTAAGAACCTTTGGTGC Gene GeneID:317776|MYB:NM_175050:8_cdna Constitutive 0 NULL GeneID:317776 9 GENE MYB NULL v-myb myeloblastosis viral oncogene homolog (avian) EMBV3_00819 CCACAAGGTCCGCAAGGCACCGGTAGGCTCCAAGTCTGACTCCAACTTCAGCAACCTGAT Gene GeneID:520157|HIPK4:XM_002694990:185_cdna UTR3_Alt 2 NULL GeneID:520157 18 GENE HIPK4 NULL homeodomain interacting protein kinase 4 EMBV3_19834 ACAGATGTGTGGATGGTGAGTGAGACTCGTTCTGTGCAGGGGTTGTGTTTACCCTGGTCT Gene GeneID:510304|LOC510304:XM_002699230:179_cdna Constitutive 1 NULL GeneID:510304 29 GENE LOC510304 NULL similar to nuclear factor related to kappaB binding protein EMBV3_25778 TGCTCAACTACTGTCAGTGCAAGCTGGTGGCCGAAGAGTATTACGAAGTGCTGGATCACT Gene GeneID:360190|AIP:NM_183082:494_cdna Constitutive 1 NULL GeneID:360190 29 GENE AIP MGC128254 aryl hydrocarbon receptor interacting protein EMBV3_21672 CTTGCTCTGGAGGGAAGAGCGATGGGAGAGGGCCCAAGGGATGCAGACAGTGATGAAAAC Variant GeneID:535450|PUM1:XM_002685620:287_cdna 531^818 3 EMBV3_09325 GeneID:535450 2 GENE PUM1 NULL pumilio homolog 1 (Drosophila) EMBV3_35463 AACAGTGTGGTGTCTGGTTAACATACCAGAGCCATTCTTTGACCCTGAAAGGCAGGGTGT Gene GeneID:505859|PYROXD1:NM_001105334:19_cdna Constitutive 1 NULL GeneID:505859 5 GENE PYROXD1 NULL pyridine nucleotide-disulphide oxidoreductase domain 1 EMBV3_21813 CCCCCACACTCTGACACACTGTCTTTTTGCTCTTGGAACTTTGCTCATCTACTCTCCAAC Gene BVT0102_184775 + 0 NULL GK000019.2:41079136-41084251 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093837 TCONS_00093843 TCONS_00093839 TCONS_00093840 TCONS_00093841 TCONS_00093842 TCONS_00093835 TCONS_00093838 TCONS_00093836 1 XLOC_057271 Coding TCONS_00093836 XLOC_057271 Coding Coding MSL1 19:41068781-41081060 = TSS70309 3792 1 TCONS_00093836_4 413 10 0.691969376119889 0.00167956562262724 0.00242405378509196 0.00237932656471327 0.00135847576900031 0.00128125033448845 0.000283106849062931 0.00167469978853412 0.00107284108530362 3.17040977412676e-06 0.000261445572150552 4.34313828269382e-05 0.000160501240521386 0.000359502477144534 0.00118072082401042 0.00126451115370654 0.00250026604674374 2.4682179369887e-07 3.71631350478967e-07 0.00136481712466782 0.00115167068425228 0.000520385965630494 0.00137252581498319 0.000885371488344691 0.000315085918633247 0.00105715643039439 0.0010794203227927 0.00104179540548062 0.000544502146503 0.000323732366366797 0.00011427327238281 XM_001254563.5 MSL1 PREDICTED: Bos taurus male-specific lethal 1 homolog (Drosophila) (MSL1), transcript variant X1, mRNA. 0.0 6691 100.00 0.978111814345992 XM_005257298.1 MSL1 PREDICTED: Homo sapiens male-specific lethal 1 homolog (Drosophila) (MSL1), transcript variant X1, mRNA. 0.0 5061 90.51 0.977848101265823 TCONS_00093836_4 sp|Q68DK7|MSL1_HUMAN MSL1_HUMAN Male-specific lethal 1 homolog; 0.0 820 99.03 0.997578692493947 1 coding 1 1 1 1 0.0981448585372911 0.537312187510213 0.0347581884329479 0.459577643262052 GCATGCGCCCTCCGGTCGGCGGCGGCTGCGGCTGTGGCGGCTCCGAGCGGCTCCGTTTTTTTAAAGGGAAACGCTGAGGCCGAGGGCCGATGGAAGAGTATGAGGAAGAGCCCTCTCGGAGGTGGCGGCGGCTCTGGAGCTTCCAGTCAGGCCGCCTGCCTCAAACAGATCCTTCTGCTGCAATTGGACCTCATCGAACAGCAGCAGCAGCAGCTGCAAGCCAAGGAAAAGGAGATCGAGGAGCTGAAGTCAGAGAGAGACACGCTCCTTGCTCGGATTGAACGTATGGAAAGGCGGATGCAGCTGGTAAAGAAGGATAACGAGAAAGAAAGGCACAAGCTGTTTCAGGGCTATGAAACTGAAGAAAGAGAGGAAACGGAGCTATCGGAGAAAATTAAACTGGAGTGCCAGCCGGAGCTTTCTGAGACACCCCAGACTCTGCCTCCCAAGCCTTTCTCCTGTGGGCGGAGTGGAAAGGGACACAAAAGGAAATCCCCATTTGGAAGTACAGAAAGAAAGATTCCTGTTAAAAAGCTGGCTCCTGAATTTTCAAAAGTCAAAACAAAAACTCCTAAGCACTCTCCTGTTAAAGAGGAACCCTGTGGTTCCTTATCTGAAACTGTTTGTAAACGTGAATTGAGGAGCCAAGAAACTCCAGAAAAGCCCCGGTCTTCAGTGGACACCCCGCCAAGACTCTCAACTCCCCAGAAGGGACCCAGCATCCATCCCAAGGAGAAAGCCTTCTCAAGTGAGATAGAAGATTTGCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACCGTTACCATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAAGGTGTCTGATGCCATCAAGTGTTGCAGGAGAAACTTCAGTCTTGGCTGTTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCTAAGGGACCCAAATCCTTCAGACCTTTTGGAGAACCTGGATGACAGTGTGTTTTCAAAGAGGCATGCAAAACTGGAGCTGGATGAGAAGAGAAGGAAAAGATGGGATATTCAGAGGATCAGGGAACAAAGAATTTTACAGCGACTGCAGCTCAGAATGTATAAAAAGAAAGGAATTCAGGAATCTGAGCCCGAGGTTACCTCATTTTTCCCTGAGCCAGATGATGTTGAAAGTTTGATGATTACCCCCTTCTTGCCTGTTGTAGCATTCGGACGACCGTTACCAAAACTAACTCCACAGAATTTTGAGCTGCCCTGGTTGGATGAGCGTAGCCGATGCAGGTTGGAGATCCAGAAGAAGCAAACACCTCATCGGACGTGTAGGAAATAGCTGTGCTGGCAAGAACCTTCTGTCTTCAGATAGTTGTAGCATGCCATTCCCAGGGAGTGGCAGAGACCTGTATATGTGACCTATGTCCTTATGTATGTTACCATTTGCTGAAAATGCCCTTCCATACTCCCCTGATCTTGGTTTTGTTTTCATCACTCTGATTTCACAAAAACTCTTTCATTGGGCTAATTGTGAATTGTGGAGGGTGATTGGGATTTCTTTTCCCTTTTTGGGGAAATGAGTTCTCAACTTAAATCTATAGGATGGCAGACTTGGAAGCTTCAGGGGTCTGCTTCTTTACATTTGCCTATGTTAAAGGGGTAAAAGGGCTCTCTTCATTAGACTTGTGGAAGATGAAGCAACCCCTGCCTTTAGAGTTGTGCCTGCATGGCACTCTTCTCGCCCCGTATACCCTTCCTTATAGTATGGGTATAGTGGTTTTTACCCTAAAACAAAACAAAATTTCACCAGGAGCTTAAGGACCAGATGAGGAATAACAAGTGACATGATGAAGCAAGTCATCTTCACAGGGTAGAAAAGATAATGGAGAGTTGGTTGATAAATATCTGAAAACACAGTTGTCTTAAAACTGTTTTGTGATACAGCCATGTGGGAAGGGATGTTTGGCTGTGATTATTTTCTTAAGTTAATGGGTAACTGAATTTCTTTCCCCACCCCTCAAGAATAAAATCTTCTGAAGAGAGAAAGAGGATGGTTAGTCTGGGGCCAGTTATGGCTCTAAACAAAAGCAGTTGGTGTTTGGGAATGGCATGCCAGATCCTGTACAGATGTCTTTGTGTCACATCACCTCTTGAGTATTCCTTAGTTGGGTTTTATCCTTTTAGCTGAGCTCTTGGTGGTGGGTTAGAGATTTAGGGAGGGTGGGGATGTATGTGGAAATATGTGCTTCCTCTGGCTGGCAAATGTCTACATTTTGAAACAAACAGATGTACCTAATGAGCTTCTCCAGTTCATTTTGTAATAATAGATTTGTATGTGTACCATCTTGGTTCCCCCCTCCCAACCCTCACCTCCCCCATTTTGTTAAAAAATTTCAGGACAGCACTCCAGGCCACTTTGGTCTCAGTGTAAGATCCCTGTAACTATCTGGAAGGAAAATAGAGCCAAGACCTCTGGTCTTAAATATATAGGAATTGCCTTTCTTTAGTCTTCAGGACTATTGTATGAAAACAAGTAGGGGTCTAATCTCCTAGAAGGTAGGGGCTTTTATCCTTGAAGAGAATATGTCCCCAGATTATTAGCACTTTTAGAGGAGAAGCCAAGGTATGTAGGGTGTGTGGCCGGCCCGACAGTGGAGCATGAGAGAATGGGATACCATTGTGGGAAGGGAAGAAAAAAGTTCCTCAGGGGCCTCCCACTGCTAAAGCTTTTTGTGAGATGTTGGTCTGTGCTCCCTGAGTTTGACTTTTAAAGGAATTACTCGGGCAGCACATGTAGTATTCTTGGATGATCTTGCTGCTCTTATTTCTCCTTTGTGTGTGTGTGTGGCTATGGGTTTTCATTTGTAACTCCATCTGCTTAGGAGAGTGGGCTCTCCACAAGGGAACCTGCTGTGAACTTCTTTGCAGCAAGAATGTAGAGAGAAATAGGACTTATTCCACTAGGGGCTCTCATCTCACACCTTAAGGAGAGGAAGGAGATTTCTAGAAAAACTAGGCCAGATTTTCTTTGTTCTCCATCATTTTAATATGGCAAACTGTTTGGCTTTCCTACTCTGACCTATGTTATGTTCCTTTAAAATGTGCCCAAGAAGAAAAAAGACCAGTCAGTGTCTCCTTATTTTATTCCTTGATTCCTCTCAGTTTCTTAATTTTCAGCATTTGTTGGATTCCTTTGGATATGGGTTAGCAGATTTCACCTTTGTTTGTTCCTACCCAAGGGACTTCCCAGATTCTGAACTCAAGTTAGATGAAGAGGAATCCATGAGGTGCTATTTGCCCAGACTTAGGTGGATTCTAATTTTCTTGGTTTTCCCTCTACCTAGTATCTATTTTATTGCCCCCTCTTCTAGATCAATTCTCCTTTGATTTGGATATGTTGAAGTTTTTTCGAGGAGGTTGGAGAGTAGATGAGCAAAGTTCCAAGAGCAAAAAGACAGTGTGTCAGAGTGTGGGGGGAAATTAGTCTTGTTTTTTCCCTACATGGGATACAACACTGTGAAATTCAATCTTCAAGTGAAGGCCCTGCCGTTCTCCTAAAACATAGTTCTTTGTTTCTTTCTTTAACAAAGTTTAAGCTAGTGTTAATAAATTAAAAAAAAGAAATTGCTTGTCTGTCTACTTCAGCTTTGTTTTATGCCCATTTCATATTGTTGTCTGTGTTGTAATTCATACTTTTGATACCATTTCTGATGTGTAAAATTGGTTGTCTTGTAAATATCTTATAAAGAGTTCAACTGTAAATAAACTATTGTGGCTGTTAATTTTTGAA EMBV3_08838 ATTGCTTGTTACCACGGTTGTCAGGCCATTGTGGATACTGGGAGCTCATTGCTGATTGGC Gene GeneID:617765|LOC617765:XM_002699309:304_cdna Constitutive 0 NULL GeneID:617765 29 GENE LOC617765 NULL similar to pregnancy-associated glycoprotein 8 EMBV3_29104 GGACCCAGAATAGTGGACAGCTTTTTCTGTGATATTCCCGAAGTGATCAAACTAGCCTGC Gene GeneID:781713|LOC781713:XM_002690702:339_cdna Constitutive 0 NULL GeneID:781713 10 GENE LOC781713 NULL similar to olfactory receptor Olr753 EMBV3_43123 CCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAAAAAGA Gene BVV0102_272203 + 0 NULL GK000020.2:57638164-58304220 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122094 TCONS_00241066 TCONS_00066405 TCONS_00034472 TCONS_00129428 5 XLOC_073650 XLOC_147730 XLOC_041119 XLOC_020687 XLOC_078141 NonCoding TCONS_00241066 XLOC_147730 NonCoding NonCoding - 9:59411083-59412679 - TSS180744 1596 2 TCONS_00241066_3 52 1 0 3.83618306476266e-06 0 0 5.20310846526627e-07 0 0 0 0 0 0.000371602900397673 0.000357601974581728 0.000119595869008014 5.78238343294847e-05 6.3436643798457e-05 0.000423366625732826 0.0434995119042029 0.00915912048134125 0.0335503791342459 0 0 0 0.0119063293741613 0.0103354717804554 0.0203104914748732 0 0 2.62224429621199e-07 0.0015197245229825 0.0010367077463294 0.00443118164624402 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 2e-70 271 86.70 0.143483709273183 0 noncoding ACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGGGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAAAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACATCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGCAGAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAGAAAAATAAAAAGAAAAAAGGAAAAAGTGAAAAAGAAAAAAGGAAAGAAAATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGATCGGAGGAGGAAGGAATCAGGGAATGCAGCAAGATAGAAAAAGAAAAAAAAAAGGAAGTTAGAAAAAGAGACACAGAGAGAAAGAGAAGGAGGAGGAAAGAAAAAGTTAGAGAGAAAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAGAAGAGAAGAGGAAGGAAAAAAGATAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGGAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTTACAAGACACTGTGGCCAGACGCCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCACCTTCCAGGGCCCAAGAGTTCCCCACTTGGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAACAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCCTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAGCCCAATGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTCGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAATAAATAAATAAATAAATGAAAGAGAAAGAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACA TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 EMBV3_07000 AGCCTGAACGCTGATAATGAGGACTACTCCAGCACTTCCAGGTGGAGGGAGACTGCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04442 GCTGAATGGAAATACATGCTGCCTGGGCCCTTCTCCATTTTCCAGCTAGTGCTCAGCCTG Gene GeneID:100298453|LOC100298453:XM_002696592:40_cdna Constitutive 0 NULL GeneID:100298453 21 GENE LOC100298453 NULL similar to myeloid-associated differentiation marker EMBV3_43727 AACTTAATACAAGCAGACTACATTTCACAGGACTGCTGCAGATCAATGATAAAATTGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06171 TAGCTGAGGCCAGGAGGCAAAGGAGGATTTTAAGCAGGGCGGTGTGTGGTCTGATTTCTG Gene BVV0102_100920 - 1 EMBV3_17547 GK000003.2:111483761-111493035 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180209 1 XLOC_109979 NonCoding TCONS_00180209 XLOC_109979 NonCoding NonCoding - 3:111484597-111486892 - TSS134968 2295 1 TCONS_00180209_1 107 0.386492374727669 1 0 0.00117975258283009 0.000227677037268584 0.000604835818745181 1.80917718079963e-05 0.000268909668320811 2.33794365743911e-05 0.000228694831636063 0.000229372866751895 0 1.7928098452127e-06 3.98986226927906e-06 0.000361463540923809 3.75069549735201e-05 5.73907767914435e-05 0.000252257544125889 3.4524958848747e-05 0.000122979912651451 0 0.000484312016724464 6.89375171867639e-05 1.45503347110496e-05 9.70022112936302e-06 0.000487684342113142 0.000168011646267015 8.75492852279574e-05 0.000101307363237185 0.000102120252032663 4.60378837543915e-05 0 3.92957784944011e-05 XR_232437.1 LOC101910063 PREDICTED: Bos taurus uncharacterized LOC101910063 (LOC101910063), 4e-42 178 72.13 0.156862745098039 0 noncoding 0 0 0 0 0.0303107089982576 0.795149869281253 0.0728360443424208 0.448812357522922 GCTGGGGAGTTGAGCATAAAACCAGCCAGATGTGGTCCCTGGCCTGTGACTCTCACTGGCTAGAGGAGACAGGCGGGAACTGTGCCCATCGGCCCTTGGTGAAGAGTAAAGATGCAAAGTTCTCCTGACTTGGGGGGCTCAGTTAGGAATGTTTCCTGGAGAAGACAGCATTAGCCAGGGGGATGGGAATAATCAGGAGTCTATAATAGGAATAGAAAAGAGTTTTATTTGAGCCAAACTGAGTATTCTTGCCCAGGAGACAGCCTCTCAGATAACTCGGTGCAACTGCTCTGGAGAAGCATGATTTTTCAGCACAGTTTATATCTTGTTAGAACAAAGAACGTCAAACAAGTGAGGGATATTTCAAAGTTGCGAAAAAATAAAACCAAAACCCACGAAATCACAGATCAGCAGTACACAGCGAGTCAGTACGGCCTTGGCACCTGGGAAGAAAATCTTATCATTGAAGGAGGAGCAGCATCGGTGTTCCAGAAAGGGAGGCGTGATGTAACCTTTATTTTTAACATGAACATTCTTTACTTCTGGCCAATGCACCCTTTTCTTTCATACTTAAAGCACTGTGCGATGTGTTTGATAGGGCCACAAACAGGATGTTTTAGTTAGCATAAAATTCGAATTAACTCTTGCATAAGCTGTGACTTCCCCATACTTAGATATGTGCAACTCTCATCAGCCAGGTGGAGGGTGGGGAGAATATTCTAGGCAAAATAACTGCAGGAACAAAGGCTGCCAGGTCCTGAGGCTGTACCTGCCTTGGTGGGAGAGGCCATAGGGCCTAGAAGTTGAGGCTGCTGTTGACCCCTGGGCCCTTAGGTAAGTTGCTCACACCCTGCTGCCTCAGTGTATTCCTCTGTAGATTGGGGACATAATAGATCCTACCCGTAGGGCTAATGGGAGATCCAATCAAAGCTCACAGCATAATACAAGTACACCGAAAGGTTTCCAATGGCTGGTGGCTAAAAGCGTTGTAACGAAACATTTCTGTGACCGAAAGGGTCGGTGGGTGGGTCTTGGTGGAGCAGAAAGCGCTGAGAGGGAGGCAGCTCAGGTGGAATACTGCTGAAGGATGGTGCAGCTCAGGAAACGGGATGTGGAAGGTGGTGTCTGAGGCTTGGTGGCAGAAAGGTCCTGCGTTTCTCCACAACAGGATTCAGCTTGTGGACTCCTGGTGTCCCATGACGGGTCCCCAAGGGTCCTGCCTTTGGAGGACCTCTGGGGCACCAAGTGCGGTGGGCTCAGCTCCGACCTCAGAACTTTCAGGATCAGGCTGAGCTGACTTCCCGTTCCAGGCCTGTCCCTGAGGACCATGCTGAGCTGAGCCTCCTGGACTTCCAGAGCTGACAACTGCGCCCACTAAGTTCTGACCTCCGAGGGCATGAGAACCGAGGTCCCTGGAGGCGGGTTCTCACCACGCCCCCACTGCAGCCTCTGCTCCCAGAGTTCCTCTCCTGTGGCTGGCTCTCCCAGAGCCAGATCTGATTTGATCCCATCTACTGGGAAGGAGGGAGGAGCTGCCTTCACCCTTCCCCAGGGGCTCTGGAGGTCAGAGTTTGAATGACCCCACCCCTTCTGGGAAGGGATGAGCTGGGGTCAGCCAAGACAATCCCACACCTGGCCCTTCCACCTGGGAAACATCCTTAGATCTCCACACTCCCCACCGTTCCCACTGCCCTGACCCTGTGTAGGCCACCATCTCAGTGGCCTCCCAACTGGTCTCCTGGCTTCCCGCCCAGCCTCCACCCTTCCCCAGAAATCAGACCACACACCGCCCTGCTTAAAATCCTCCTTTGCCTCCTGGCCTCAGCTACCTCTGCAGCCTCCTCTCTCTTCTTTCTCTCAACCATCCAGCCATACTTGACTCTCGCCTTTGTCTGTGCTGTTCCCTCTTACCTCATGTGCTCAGCTACTCGGGACTTTGCTCCATGTCCCTTCTCCTAGAAGGTCCCCTTGCTGGCCTCCTCTGGATTAGGCGTGCCCTCGGCGGCTCACCTACCGCCCCTGGGCACACTGTTGAGTTGTGTTAAGTTCATTCACATTATTGTGCAATGGATCTCTAGAGCATTTTCAACTTGCAAAACGGAATCTCTAGAGAGATGGAACACTCCCATTTCCCCGACTCACCCAGGGTGCATCGCTTACTTCTGTTTGTTGTCATTCCTCCCCTGGTGGGCCCCTTGAGGGCAGGTGACTGAGTCCTGTTTACATGCCCAGCACCTAGCAGGGAACCAGGCTCATATATAAATTTGTGAATCCAATAAATTATTTACTGAGGAC TCONS_00174762 . 5' 838 TCONS_00174762 . 5' 838 EMBV3_37216 CGAGCACTGGCCCAGGAGATCCTACCCCAGGTGGACATCGCATCAGGGATGGCCATTGAA Variant GeneID:513795|ECHDC2:NM_001038536:52_cdna 735^785 3 EMBV3_11913 GeneID:513795 3 GENE ECHDC2 MGC134069 enoyl Coenzyme A hydratase domain containing 2 EMBV3_06399 GCTTCCTAAGGATTCAATAGTTACATACAACTTACCACTTGACATTCCAACTCATTGTAG Gene GeneID:522144|GPR77:NM_001077947:265_cdna Constitutive 0 NULL GeneID:522144 18 GENE GPR77 C5L2 G protein-coupled receptor 77 EMBV3_28474 CCTAACTGCATGATTTCTGATTTCTCTACCTCTAAAGCATATCTGCAGTGTCCCAAAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04529 AAACAAGACATCTTGAATCCAGGGAGGTAAGCTAACGGGATTATGGCTGCTGTGCCAGGG Gene BVT0102_159120 + 0 NULL GK000024.2:21756831-21896591 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15267 GCATTGTCACACCGGAAAGCTAAAGAAACAGAATGGTTTCAGTTTTGCTGAAGACTGGCC Gene GeneID:509788|MTDH:NM_001046038:27_cdna UTR3_Alt 3 NULL GeneID:509788 14 GENE MTDH MGC137491 metadherin EMBV3_38963 GTCCATCAATAGCTCATTTTCAGTTCAGTCACTCAGTCGTGTCCGACACTTTGCCACCTC Gene BVT0102_287669 + 1 EMBV3_07342 GK000010.2:63967224-64213456 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24176 TCTCATTTTTCAAAATACCATGGGGAGATATCACATTTCTCTCCTGGGATACTACCACTC Gene BVV0101_024217 + 0 NULL GK000001.2:46370618-46382670 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20164 AGCCATTCGGTGTTTTCTGTCCTGCAATGCTGCCGTGGTGGTACCTAGCAACTGGTAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16446 CTCCATGTGACTGAAAGTTCCATGAGGTTAGGGTCCACACCTGTTCGCTCATAGTATACC Gene BVT0102_062781 + 0 NULL GK000021.2:62147190-62403693 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13575 GGGATCACTGGGACGCTGTCTTTGTGAAGGTTTGCTTGGGATGAAAAAGGATATTGCAGC Gene GeneID:538793|ZNF238:NM_001078016:83_cdna UTR3_Alt 2 NULL GeneID:538793 16 GENE ZNF238 MGC142551 zinc finger protein 238 EMBV3_05976 GTCTCTGATTCTCTTCAGCCCTCACCCCTGGCCTTCATCTGTCTTGATTGACATCTTTGC Gene GeneID:281036|CALR:NM_174000:5_cdna Constitutive 0 NULL GeneID:281036 7 GENE CALR NULL calreticulin EMBV3_06010 GGGTCACTCAAGGACCACGTGTTCAAGACTTAAAATCTGCAAAGGAAGTGGAAGAACACG Gene GeneID:509273|FAHD1:NM_001075400:108_cdna Constitutive 0 NULL GeneID:509273 25 GENE FAHD1 NULL fumarylacetoacetate hydrolase domain containing 1 EMBV3_26466 TCTTCGACTCCATCTGCAACAACAACTGGTTCGTCAGCACGTCCCTCATCCTCTTCCTGA Gene GeneID:540047|LOC540047:XM_002694698:303_cdna Constitutive 0 NULL GeneID:540047 17 GENE LOC540047 NULL similar to Guanine nucleotide-binding protein G(z) subunit alpha (G(x) alpha chain) (Gz-alpha) EMBV3_09438 GACCAAGCACGCTCTTAAACTGTCATGCCGAACGGCCTTGTCCAAAATGTTCCCATGTCA Gene GeneID:507041|PRKCE:NM_001111120:59_cdna UTR3_Alt 2 NULL GeneID:507041 11 GENE PRKCE NULL protein kinase C, epsilon EMBV3_25492 ACGTGTATATAACTGAGGTGTCTGTACGGAATGCCCTTTGGTAGCTCTGAGTTGGTCACC Gene GeneID:512457|WWP2:NM_001083414:204_cdna UTR3_Alt 2 NULL GeneID:512457 18 GENE WWP2 MGC142390 WW domain containing E3 ubiquitin protein ligase 2 EMBV3_16579 ATGCCTGAACCGGCTAAGTCTGCTCCTGCTCCTAGAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:781916|LOC781916:XM_002698682:19_cdna Constitutive 0 NULL GeneID:781916 27 GENE LOC781916 NULL similar to histone 1, H2bn (predicted) EMBV3_15858 CTTGATCCTCTCCATAGCCAGTGGGCAGTCCAGGCGAAACTTGCGGCAGAATTCATCAAT Gene BVT0102_004519 + 0 NULL GK000014.2:1692500-1719731 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051005 TCONS_00051010 TCONS_00051007 TCONS_00051009 TCONS_00051006 TCONS_00051008 TCONS_00051011 1 XLOC_031069 Coding TCONS_00051007 XLOC_031069 Coding Coding VPS28 14:1693642-1698621 = TSS38136 931 1 TCONS_00051007_1 172 9 0.81478505423865 0.00256089527488969 0.00173183586791575 0.00150823124971819 0.000820603060391034 0.00130499000157282 0.00046234701208351 0.000119013709367949 0.00250950642994497 0.000559343509536866 0.000930527177670766 0.00128597812874531 9.9857921133039e-05 5.23927840365669e-05 2.02100773524843e-05 1.75634843339674e-06 0.043916250100574 0.0102910111729007 0.0331166270641144 0.00110209685914137 0.00223449579455384 0.00119690804578678 0.010638601539142 0.0156301159489993 0.0158516853593337 0.00051542099617748 0.00346092874464965 0.00156556690742251 0.00336224196353834 0.00384160932988213 0.00342568592827068 NM_001035504.2 VPS28 Bos taurus vacuolar protein sorting 28 homolog (S. cerevisiae) (VPS28), mRNA. 0.0 1236 100.00 0.73469387755102 NM_183057.2 VPS28 Homo sapiens vacuolar protein sorting 28 homolog (S. cerevisiae) (VPS28), transcript variant 2, mRNA. 1e-170 603 92.09 0.446831364124597 TCONS_00051007_1 sp|Q3T178|VPS28_BOVIN VPS28_BOVIN Vacuolar protein sorting-associated protein 28 homolog; 6e-118 337 77.83 0.994186046511628 1 coding 0 0 0 0 -0.00970440094708108 0.927215048023413 NA NA AGGTGCGCCCCGCCCTCGCGCCGTCGCTGGGACCTGCGAGGCGGTCCAGCACGTCTGAACCTCGCCCCAGCCACTGCATCAACTTCTCAAGTGAGCAGGGCTCCTGCTTCCACTGTCTGCTCAGCTCACTGCCCATCTGGGTCCCCGAGGACTTGTCTCCAATTGTCCAGTGACTCCAGCTCGCTGCACCAGGATAAGCCCAGACTCCTCTTGCCTGTCACTCCTCCAGTGGCTGCCGCATCTTCCTCTCTTTCCTGGTCACCTGACTCAGAGCCGGCAGGATGTTTCACGGGATCCCAGCCACTCCTGGCATGGGAGCCCCTGGAAACAAGCCGGAGCTGTATGAGGAAGTGAAGCTGTACAAGAACGCCCGTGAGCGGGAGAAGTACGACAACATGGCGGAGCTGTTTGCGGTGGTGAAGACGATGCAAGCCCTGGAGAAGGCGTACATCAAGGACTGCGTCACCCCCAACGAGTACACCGCAGCCTGCTCCCGACTCCTGGTCCAGTACAAGGCGGCCTTCCGGCAGGTCCAGGGCTCAGAAATCAGCTCCATTGATGAATTCTGCCGCAAGTTTCGCCTGGACTGCCCACTGGCTATGGAGAGGATCAAGGAGGACCGGCCCATCACCATCAAGGACGACAAAGGCAACCTGAACCGCTGCATAGCGGACGTGGTCTCGCTGCAGACCCTGAGTGGCATGTCGGCCTCAGATGAGCTGGATGACTCCCAGGTGCGCCAGATGCTCTTCGACCTGGAGTCGGCCTACAACGCCTTCAACCGCTTCCTGCATGCCTGAGCCCTGGCTCCCCAGGCCCGCCTTCTGCCATGGTTCCTGCTTCCCCGGACACCTGCTTTCCACGACCACCCGTCTGTCTGTTCATGGCGTCTGGAGTCCCCTCTTCCCAATAAAGCTGTTTTCTGACCTGC EMBV3_10732 CCGGCGGCGCCAGCAACATCAGAGCTACTCGTCCTTGGAGTCTCGAGGCTGAAACCACAG Variant GeneID:616283|LIN7B:NM_001046577:385_cdna 618^961 4 EMBV3_27938 GeneID:616283 18 GENE LIN7B MGC137426 lin-7 homolog B (C. elegans) EMBV3_08408 TTCTAGCATGGCCGCTGACAGCCCGAGCAGAGCTCGCTGTGGCCCATGACCTTTGGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06714 GATTATGTGAAGGTGGGTCGTGTGGGTTATGTGTCTGGCTGGGGGCGAAATGAAAACTTC Gene GeneID:280692|HP:NM_001040470:17_cdna Constitutive 0 NULL GeneID:280692 18 GENE HP MGC133752 haptoglobin EMBV3_00780 CAACCTGTATTGCAAAGCTTCAGTTCCTCCTACCGATAAAGTGTGTCTGTGGTTGGGGGC Gene GeneID:508727|VBP1:NM_001038516:61_cdna Constitutive 0 NULL GeneID:508727 X GENE VBP1 MGC133551 von Hippel-Lindau binding protein 1 EMBV3_02912 TTGGCTTTACTTCAGCTTGGAAACCTTGACCAGGAATCTCCCCCTTCTCCTTGCCCACTC Gene BVT0102_403572 + 1 EMBV3_33343 GK000004.2:62349342-62384965 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40090 AAGTAACAGGGACTCCATCCAGGGGCTGCCAGGTTGATGCCTTTGGCTTAAGAGTGATTC Gene BVV0102_225387 - 1 EMBV3_08076 GK000023.2:6785245-6922379 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33503 GAAAACAGCTGCCTGACAATCCTGGAGATTCTGTGTTACAGGCCCCACCACAGGAAGAAA Gene BVV0102_162622 + 0 NULL GK000015.2:67099806-67240026 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062206 TCONS_00062205 TCONS_00062208 TCONS_00062211 TCONS_00062213 TCONS_00062214 TCONS_00062209 TCONS_00062204 1 XLOC_037231 NonCoding TCONS_00062214 XLOC_037231 NonCoding NonCoding - 15:67198067-67209071 - TSS46151 1104 3 TCONS_00062214_3 56 0.343297101449275 5 0.900118149595565 0.00428519048346801 0.00141378156507797 0.00218012285309803 0.00128363892394127 0.0032465817219352 0.000712837838166236 0.00131239647700241 0.0015200098976892 0.00223856366582086 8.55088216172925e-05 1.24411940629144e-05 0.000165181049702552 0.000250142003777817 0.00125394506037372 0.00332659527405936 0 0 0 0.0027132458162362 0.00528942054680001 0.000484436185992597 0 0 0 0.00250994155550311 0.0026704301070191 0.00121125858149053 8.70025760362349e-06 7.03563519943869e-05 2.5087816921414e-05 0 noncoding GTTCCCTGAGAATTCTGGGAAGGAGACTCCCACTCTACCTTGCTGCACTTGAATGAGAGGTGTGAGGCCCGGAGGCTGACAGAACAAGATGGAAGCCCTTCAAGAGAATTGCCAATAAAGAAACTGAAAATGGGCACCGCCTTCCGGAGGTTCCCATACAAGCTGGGAACAGCCGGGACTAACTCTTCTCCAACATTATCGCTAATTGGCAGCAGCAAGACAGCCTGTGAGCTCAAGAAAACAGCTGCCTGACAATCCTGGAGATTTTGTGTTACAGGCCCCACCACAGGAAGAAACTGATGCTATCAAACAGTGCTCCATTCCAGATTCCCAGAGAAGAGAAGCTGATTGGTCCAGCTGGGGTCCACTGTACACACCTCAGCTCCAATCATCTATGACCAAGAAAGCAGCAGCCCACTGTACAGACATGGGCTTACTCCTGCCATCCTGAGGATGAAGATAAAGGAGGAGGTCTCAAAGTGTGGGAGAAGAGGAGTGTCCCCGCGTGGAGGCACCCAAGGTGTCATTCCACTTTACCCAGTAGGGCAGAAAGAGGACTAATGCATTTCAGAATAATTTTAAATAACCAAGGTCACAATCTAGAAGATTTTCTGCACATACCACAGTCAAGCCAAAAACTCAATTTAGCTAAGCGTGTTTTGCTCTGCATCCCAAATGTAGCAGACACAGATGGTTGCCCATCTAACAGCCTGTTCCTCCTTCTCAACTAGCAGGATCCCACATATATTTAGATGTCCATTCCTCCCTCGTGTCAGTCTTAGAAAGCTTACCTTATCCCTGTGTCTAGAAGGAAATTAATCTAATGGTTGCATTGTGACCCGTTTTGGCTTAGGCATGGGCATATGACACAATTGTGACCAATGAAACATGATGACGGATCTTCTGAGGGGCCTTCTGCAAAGATATGTTTCTCACTGATAAAAAGAAACTCATAGGAACACTTTCTAACCTTCTACCACCTTGTGTCTGGATGTGATTCCCAGAACAGTGGCAGCCATCGTATGACTATCAGGGGACCTAGCCTGAGGATAAGAGAGTCGAAATACGGCCCCCCAGGCATCATCTTTCTGCTCTGTCACCACC TCONS_00059923 TCONS_00059924 TCONS_00059925 r 5' 41924 TCONS_00059923 TCONS_00059924 TCONS_00059925 r 5' 30956 EMBV3_27788 GTATCTTTTGCAATCTTTTTTTAACCAGAACGGTTCAAGTTCTAAGCAGGCAGTAGGAAA Gene GeneID:540450|CYTIP:NM_001102243:139_cdna Constitutive 2 NULL GeneID:540450 2 GENE CYTIP MGC179355 PSCDBP cytohesin 1 interacting protein EMBV3_31911 AGCATGGTATTCCCAGCCCAAAGGAGAGTCTAGGCCAGAAGTGGGAAGAGACCCTTGATA Gene GeneID:539804|TRIM7:XM_002689054:26_cdna Constitutive 0 NULL GeneID:539804 7 GENE TRIM7 MGC166434 tripartite motif-containing 7 EMBV3_32635 CTTTGGTTTTGATAAAATGGGATGTGGGAGTTTTTAAATGCTGTGCCCCTGGCTTGTCCC Gene GeneID:514902|VASP:NM_001038110:226_cdna Constitutive 0 NULL GeneID:514902 18 GENE VASP MGC127789 vasodilator-stimulated phosphoprotein EMBV3_01079 CTGGAATCCCCTGATCCTGCCTAGTCCGAGAGCCCCAATAGTTCTATCCCAAAAGGGAAT Gene BVT0102_047469 + 0 NULL GK000002.2:70691887-70972714 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10862 CCTCAAGGCTAGTATGAGGGAGCTAGGGCTGCTCATCTTTTTCCTCTTCATCGGGGTCAT Gene GeneID:538703|KCNA1:XM_002687884:65_cdna Constitutive 0 NULL GeneID:538703 5 GENE KCNA1 NULL potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) EMBV3_42552 CTGTACCTCAGTTCATTGCCAGAGAGCCATTGTTTCTCTCCTGAGGCAAAGCCCAACACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15028 GTGGAGTCGGCGGCCCAGCGAACCCGAACGGGATGCAGGTCACAAATGTCCAGTTGACAA Variant GeneID:539124|TRAF6:NM_001034661:57_cdna 167^487 1 EMBV3_17282 GeneID:539124 15 GENE TRAF6 MGC128039 TNF receptor-associated factor 6 EMBV3_22196 TGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTA Gene BVV0101_046921 + 0 NULL GK000014.2:22543183-22669360 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218607 TCONS_00204180 TCONS_00011558 TCONS_00134878 TCONS_00099337 TCONS_00138407 TCONS_00132405 TCONS_00138406 TCONS_00208740 TCONS_00148378 TCONS_00122163 TCONS_00201404 TCONS_00135618 TCONS_00151311 TCONS_00110358 TCONS_00058128 TCONS_00201274 TCONS_00196907 TCONS_00220245 TCONS_00056822 TCONS_00134877 TCONS_00206255 TCONS_00229178 TCONS_00254829 TCONS_00057018 TCONS_00118116 TCONS_00057884 TCONS_00002708 TCONS_00118479 TCONS_00091893 TCONS_00197076 TCONS_00109280 TCONS_00176835 TCONS_00116161 TCONS_00089192 TCONS_00252994 TCONS_00134876 TCONS_00218367 TCONS_00100335 TCONS_00202228 TCONS_00129603 TCONS_00023551 TCONS_00156814 TCONS_00054728 TCONS_00141021 TCONS_00220136 TCONS_00250272 TCONS_00199292 TCONS_00229177 TCONS_00206254 TCONS_00196654 TCONS_00174930 TCONS_00025023 TCONS_00251038 TCONS_00022175 TCONS_00167486 TCONS_00068428 TCONS_00091564 TCONS_00229179 TCONS_00233185 TCONS_00233406 TCONS_00025022 TCONS_00243110 TCONS_00161056 TCONS_00120346 TCONS_00009827 TCONS_00064874 TCONS_00242271 TCONS_00235856 TCONS_00037742 TCONS_00098489 TCONS_00118516 TCONS_00002801 TCONS_00039279 68 XLOC_131927 XLOC_124364 XLOC_007109 XLOC_081568 XLOC_059580 XLOC_084615 XLOC_080770 XLOC_084614 XLOC_127252 XLOC_090260 XLOC_073718 XLOC_123050 XLOC_081841 XLOC_092080 XLOC_066262 XLOC_035925 XLOC_122922 XLOC_118572 XLOC_133562 XLOC_034625 XLOC_124865 XLOC_138675 XLOC_157761 XLOC_034820 XLOC_072282 XLOC_035681 XLOC_000664 XLOC_072637 XLOC_056664 XLOC_118741 XLOC_065185 XLOC_106609 XLOC_070330 XLOC_053977 XLOC_155935 XLOC_131688 XLOC_060578 XLOC_123873 XLOC_078316 XLOC_014218 XLOC_095274 XLOC_032537 XLOC_085449 XLOC_133453 XLOC_153215 XLOC_120945 XLOC_118400 XLOC_104738 XLOC_014641 XLOC_153981 XLOC_012846 XLOC_102322 XLOC_041687 XLOC_056338 XLOC_142667 XLOC_142888 XLOC_149773 XLOC_097948 XLOC_073143 XLOC_005380 XLOC_039598 XLOC_148935 XLOC_144309 XLOC_021571 XLOC_058734 XLOC_072652 XLOC_000688 XLOC_023097 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_16070 GTCTGGTCAACAAGATGTGTCCCAATTACTTCATCCCTCAGTGCAACATGCTGGAGCACC Gene GeneID:519376|LOC519376:XM_002684833:167_cdna Constitutive 0 NULL GeneID:519376 1 GENE LOC519376 NULL similar to Uncharacterized protein C3orf59 EMBV3_43081 TGGGAGGCCCACGAGGACCCTGATTGAATTCCTGTTTCGGTTCAGTCAAGACAGTGCTTA Gene GeneID:781648|LAP3:NM_174098:6_cdna Constitutive 0 NULL GeneID:781648 6 GENE LAP3 PEPS leucine aminopeptidase 3 EMBV3_24348 GCTGAATTGTAAAAACCTTGCCTCTCTATAATCAGCACCCCCACTGACCAGGCCCCTTTC Gene GeneID:514660|TGFBRAP1:NM_001102008:26_cdna UTR3_Alt 2 NULL GeneID:514660 11 GENE TGFBRAP1 MGC152624 TRAP-1 TRAP1 transforming growth factor, beta receptor associated protein 1 EMBV3_16685 ACACTGGGGTCGTCCTTCATCCCCAGAGAGACCAGCGGAGTCGGATGCTCAGCGTCTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01628 GCTGGTATATCCACCTGGTTTCATGGGATTTGCTGCCTCTCTTTATTATCCACAACAAGC Gene GeneID:513847|APOO:NM_001075639:20_cdna Constitutive 0 NULL GeneID:513847 X GENE APOO MGC140415 apolipoprotein O EMBV3_36259 TAGAAAGGGTTTTTATGGACCAATGCCCCAGTTGTCAGTCAGAGCCTGGTGTTTTCATTG Gene GeneID:515854|SGK1:NM_001102033:23_cdna Constitutive 0 NULL GeneID:515854 9 GENE SGK1 MGC166421 serum/glucocorticoid regulated kinase 1 EMBV3_29140 CAGGCGGTACCTCTGCATGGACTTCACAGGCAACATTTTTGGATCCCATCACTTCAGTCC Gene GeneID:530239|FGF23:XM_002687880:55_cdna Constitutive 0 NULL GeneID:530239 5 GENE FGF23 NULL fibroblast growth factor 23 EMBV3_43578 CAACGAGACCAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGACGACTCCTTTGAACA Gene GeneID:286771|ASPH:NM_174757:15_cdna Constitutive 1 NULL GeneID:286771 14 GENE ASPH MGC137539 aspartate beta-hydroxylase EMBV3_41347 TGTCATCTGGATCCCAGAGAAGCATGTGAGAAACACAAGTTGGAACTTCCAGGGATAATG Variant GeneID:614006|MGC151957:NM_001076305:56_cdna 589^655 1 EMBV3_25818 GeneID:614006 8 GENE MGC151957 NULL hypothetical protein LOC614006 EMBV3_24042 AGGCCTTTGAGCCCTGGGAGGACATTCAGGAGAACTTCCTGTACTATGAGGAGAAGTTGG Gene GeneID:509619|APOBEC2:NM_001034355:246_cdna Constitutive 0 NULL GeneID:509619 23 GENE APOBEC2 MGC128604 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 EMBV3_39157 TTACCCATCGCGGTTGCTTTTGTCTGGTTTGTTGAAGAACTGCGGACCCACTGGCCATTT Gene GeneID:100335790|LOC100335790:XM_002697217:128_cdna Constitutive 0 NULL GeneID:100335790 23 GENE LOC100335790 NULL peroxisomal, testis specific 1-like EMBV3_15225 AGGTCAAAACTCCCGTGCTGGTCAGTAGTGGGGATCGCGCCTGTGAATAGCCACTGTACT Gene BVV0102_286744 + 0 NULL GK000015.2:41402928-41624350 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02519 GGGCCTGGAATCCCTGCAGAGCTGGTGGCTGGCCCCCTGATTTCTATGTGTATTTATAAT Gene GeneID:512682|SBNO2:NM_001077911:47_cdna Constitutive 0 NULL GeneID:512682 7 GENE SBNO2 MGC143321 strawberry notch homolog 2 (Drosophila) EMBV3_05025 ATGGACCGAATGGATCGAAGTGTCTTGGGCCGGAAAGGATCGCGCAGTTACAGGATAACA Gene GeneID:525070|TDRD9:XM_002696785:495_cdna Constitutive 0 NULL GeneID:525070 21 GENE TDRD9 NULL tudor domain containing 9 EMBV3_33004 GGGTTTGATGCAGTCACCGGGGAATTCACTGGAATTCCTGAGCAATGGGCACGATTACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13017 GTGGCCGACGCCCCTGAGGTACCCATCAAAAAGCACTTCAAGGAATGTATCAACTTCATC Gene GeneID:618412|DUSP15:XM_002692285:1645_cdna Constitutive 0 NULL GeneID:618412 13 GENE DUSP15 NULL dual specificity phosphatase 15 EMBV3_01933 ATGATCATCCCTGTTCGCTGCTTCACGTGTGGCAAGATCGTCGGCAACAAGTGGGAGGCC Gene GeneID:617375|POLR2L:NM_001113726:19_cdna Constitutive 1 NULL GeneID:617375 29 GENE POLR2L MGC133494 polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa EMBV3_31675 GCATTAAGATGTGTTAGGACTGCCCATCACTCAGAGGGCAACTATCCATATTCCAGGCTC Gene BVT0102_246957 + 0 NULL GK000012.2:83055384-83066166 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035862 TCONS_00035859 TCONS_00035854 TCONS_00035860 TCONS_00035849 TCONS_00035858 1 XLOC_021010 Coding TCONS_00035860 XLOC_021010 Coding Coding BIVM 12:83016758-83062732 j TSS26214 3373 1 TCONS_00035860_4 473 0.0604802846131041 9 0.926826615622213 4.4944789349807e-78 1.36748240608423e-16 5.06239779710727e-81 0.000105835560374803 5.28818065634907e-51 2.20174535489522e-05 0.000110411823734416 0.000148525457226714 2.17835393867769e-13 1.5619865461254e-23 0 0 1.46274553666436e-14 1.53652383148002e-49 5.00372436938347e-72 0.00161689651733265 0.00222725288266783 0.00124463276868302 6.99439355151031e-275 4.88064226156803e-14 2.59064324851431e-23 6.16315199166632e-05 0.000332499038543746 0.000262903646997167 0.000181414858554512 3.37489855129249e-34 3.7231104569758e-44 2.70371609174318e-33 7.59149619825144e-61 6.15390461404992e-47 NM_001206453.2 BIVM Bos taurus basic, immunoglobulin-like variable motif containing (BIVM), mRNA. 0.0 3660 99.95 0.602134598280462 XR_243042.1 BIVM PREDICTED: Homo sapiens basic, immunoglobulin-like variable motif containing (BIVM), transcript variant X6, misc_RNA. 0.0 1853 85.37 0.482359916987845 TCONS_00035860_4 sp|Q86UB2|BIVM_HUMAN BIVM_HUMAN Basic immunoglobulin-like variable motif-containing protein; 0.0 904 86.88 0.997885835095137 0 coding 0 0 0 0 -0.00436299473726931 0.967798132180602 0.0205381880976868 0.662093272849465 GCGGGCCGCGCGCTGGAAGCTGTGATCCCGGACCCGGGCCGGGCTCCGCCGCGACCGCCGCGGCCGGATTCCGCCGGACAGGCCAGAGGAGCCCATTTTTGCAGCTCTCACGTTTTTGCAGAATGCTGTAAACGGTTGTCACAGCTGTTTCTCAAGAAATAGAAAGCGTGGCACCCTCTTCCTCACAACAGAACTTTCATAGTTGCGTTCAATGCCTAACGTTGCAGAAGCAGAAGGGGCAGATGATTCTGGAAATGGTGAGCACAAATCCGAGAGAAGGTCTCCTGAAGAGAGCCTGCAAGGTGCCGTTCAATCTTTCTGCACCCGTGCCTCCGGAGAACCCCTGGGTCCCAGAGGAGATGGTCATTATCCGTGGAGCTGTCCAGTGACCCACACTCGGGAGAAGATTTACGCCATCTGCTCAGACTATGCCTTTCTCAACCAGGCCACCTCAATCTATAAAACTCCAAATCCAGCCCGTTCTTGCCTCTCTGATAGTACCTCTTTATCTGCGGCAAATAATTCCTCAAGGTACATTGGCATCTCAGCCAGTACGTCGGACATCATCTACAATGAAGAAAACAGCTTGGAGAACTTATCCAACAGCCTGGGCAAGCTACCTCTCGCATGGGAAATTGATAAATCTGAATTTGATGGAGTGACCACGAATTTGAAACACAAATCAGGCAATGGAAAGAAGCAAGTTTCTAAGAAAAAAACTTCAGATAAGAAAGGAAGACATCAAAGGGAGTGGCCTCAGTATTCTCCTCTTGAAGATATTAAGCAGCGGAAAGTATTAGACCTCAGACGATGGTACTGCATAAGCCGACCGCAATATAAGACTTCTTGTGGCATCTCCTCATTAGTTTCTTGTTGGAATTTCTTGTATAGCACAATGGGAGCTGGAAATCTTCCACCCATCACCCAGGAAGAAGCTTTACATATTTTGGGCTTTCAGCCTCCATTTGAAGATATTAGGTTCGGCCCCTTCACTGGAAATACGACACTTATGAGGTGGTTTAGACAAATTAACGACCACTTCCGTGTAAAAGGATGCTCATATGTTCTATATAAGCCTCATGGGAAGAATAAAACAGCTGGAGAAACTGCATCTGGGGCCTTGTCGAAGTTAACTCATGGATTGAAAGATGAATCGTTAGCTTATATCTATCATTGCCAAAATCATTATTTTTGTCCAATTGGCTTTGAAGCAACCCCTGTCAAGGCGAATAAAGCATATAGATGGGCAGACATTGTCACTGATCTAAACACTCAAAATCCAGAATATCTAGATATCCGGCACTTAGAGAGGGGGCTGCAGTACCGAAAGACAAAGAAGGTTGGAGGAAACTTGCATTGCATCATAGCATTCCAGAGACTTAGCTGGCAAAGATTTGGCCTTTGGAACTTTCCGTTTGGAACTATTAGACAGGAATCACAGCCTCCAATGCATGCCCATGGAATTGCCAAATCTGAGAGTGAGGACAATATCTCCAAGAAGCAGCACGGGCGCCTGGGCCGGTCTTTTAGTACTGGTTTCCATCAGGACTCAACATGGAAAAAGATGTCCAGTATCCACGAGAGAAGGAACAGTGGCTACCATGGTTACAGTGATTACGAGGGGAATGACTGACCATGCTGGGTCCCTACGCTGGGGGTCACACACACAGCTGGTCGATGCAGGACTGCGTTAAGGCAGTACAAGATTTTAAGTCTATGTTAAATAGGAACAGATCTTGTGGGGCAAAACATAACCTTGTAGTTCCTCCAGTAAATAAGCTTGTATATGAATAGGATGGGTGATTTCAGACATATAAACAGATAAGCACAGACTTTTTTTTTGTCCTTTTAAAATTAAGAGTATATAAACATTCTGGACAGTTTTGCAAAGTCCAATAAAATTACATATAAACAAATCAGACACAATTTCATTCAATAACATCATGATTTGAAATACTTAAGCATGAAGGGACTTCTCATGACTTGACCCCCAGATATTTGTTGCAGTTTTATTCCTAAGCTCAAAATTTAAGGTACTCACTCTCTGCCCTTTAAAGAAAATTGGGGCTGTTGACTTCTAGTTTTTCTCTTGGGTTAAAGCTCATTTCAAATAACTTAGTGAGTCTAGAAATTCCTTTTTACTTGTAGCAGTATCTTGCCTGCCTCGTATTTTTCCTGATTAACTTTCTCAGGATTCTCAATAAAGAGGCAAAAGAGAAAAGACTCCAGGCACTGATCTTTTCTGCTGGTGCAGATGGATGACTTCCTGCATCAACTCAGGTGTTCTGGACTTTCTTGGTATGTTGTTGTTACATATTGACAAGAACTTTAGGTCTTGAAAGACTTCTATAAGTCTACAATAAACCTTGGTTTAGGGATAGAGTAAACGAACAAGTGGGTTTCCCTGATGGCCCAGTGGTAAAGAACCCGCCTGCCAATGCAAGAGTCATGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGATGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGCGGCTACAGTCCATGGGGTCGAGAAGAGCCAGACATGACTTAGCAACTAAAACAACAGAATAACAAGTGACATCTGAAGTTTCTACACCCAAAGTAACCTTTGAGGTGAGATGTGATATGTGACTGGTCCCCCCATATGGAGTCATGTGTTGATAAAAAAAAGCATTAAGATGTGTTAGGACTGCCCATCACTCAGAGGGCAACTATCCATATTCCAGGCTCTGAGCTCTTTCCTTTTGTAAAACCATATAGACTATTAGCTATTTGAAGAGAGTGTGTAATTGTTCAGAACGTGTGGATTTCATGTATTTGAGCTCCTGTCCAGTTGCTGTCAGTTTTTCTTCTTCTGCCAACCTGTGACTCATGAACAACTAGGATCTCTTGTCCTTTCATTCCAGGGGCTGTTCCAGGACTCCAGTCAGTAACTTGATTATTACAAGGTGCTGAATATGTTGGTAACCATATTGCAATACACCTCAAGGAAAGGGTTCAGATTTTTATTTTGAAAATATTTTCATTTCCTTCTCTTTTGAATTTTATATCCATGTATCCACTCAGATACTCCTAGCCTACAGATGGGGATATTATGAAATGGGCATTTTTCTGAAGAGAATATTTTGCTTGAAAGGTCAAGGACTGAAAGAGATTTGTAGGTCATTGATTTTGTTACTTCATACTGGAAATTTTAAGAAGTTTTCATCAATAAAGTTTTGTTTTCTACTTTTAATCCTGTGAATGTTTTGAACTTTTAAGGATGGAGTGGCCTTATAATTTGAAGTATATGACAGAGGAACATGACAGAATTTGTCAATTCTGCCTGAGTAGT EMBV3_26874 GTCTATATACCATGGCTCGTACAAAGCAGACTGCCCGCAAATCGACCAGTGGTAAAGCAC Gene GeneID:613345|LOC613345:XM_002686707:11_cdna Constitutive 0 NULL GeneID:613345 4 GENE LOC613345 NULL similar to histone H3.3 EMBV3_20945 GCATCACCAAATGTGACGCTGACATCCAGAAAACCCTCTACGGGGAGATTGTGCTGTCCG Gene GeneID:515214|ACTRT2:NM_001038115:127_cdna Constitutive 0 NULL GeneID:515214 16 GENE ACTRT2 MGC134336 actin-related protein T2 EMBV3_36022 TGGCCAGGACTTGGCTTTTCACTACGTGGCGGGCTGAAGCTCTTCTGTGCTATGAAGCGA Variant GeneID:617066|LYPD4:NM_001076442:403_cdna 81^355 2 EMBV3_36694 GeneID:617066 18 GENE LYPD4 MGC133841 Ly6/Plaur domain containing 4 EMBV3_04515 CACACTGAGTATCTGGGGTCTGTTGCCAGAATCTTGTTGCTTCTCTGTTGCAAGCAAACC Gene GeneID:281883|KCNJ2:NM_174373:2_cdna UTR3_Alt 1 NULL GeneID:281883 19 GENE KCNJ2 NULL potassium inwardly-rectifying channel, subfamily J, member 2 EMBV3_24109 GGGTCCACTGAACTCTGAGTGTCTAGAAATTTGAGGAGAGAAAGGATGAGGACCTGTCCC Gene GeneID:616131|LHFPL2:NM_001099151:48_cdna Constitutive 2 NULL GeneID:616131 10 GENE LHFPL2 MGC157216 lipoma HMGIC fusion partner-like 2 EMBV3_42836 GTCTTGAGACACCCCTGAGTTACCCACTTTTGGAGGCCATCGGGGTATAGGTGCCAGTTC Gene BVV0102_095866 + 0 NULL GK000018.2:54718296-54721239 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084107 TCONS_00084108 1 XLOC_051461 Coding TCONS_00084107 XLOC_051461 Coding Coding CCDC9 18:54707620-54720022 j TSS63077 2173 1 TCONS_00084107_5 552 13 0.825820498346908 0.000640613953538831 7.69004601326694e-05 0.000455419037583632 0.000140566726956774 2.82696799011463e-07 4.83434852456239e-05 0.000211063968194119 0.000140673783002978 7.82355344519911e-09 0.000110123332487905 1.93699081473005e-06 3.71333446722942e-05 0.000179269800466073 2.38719475773988e-11 5.29192087885023e-05 4.83552459836004e-08 0.000388227928787225 0.000116387435421772 0.000440660709919366 0.000441638484606869 0.000426154267265086 0.000104156723980631 3.77300274212872e-05 0.000759499224206845 1.22746532049411e-06 7.42222630779948e-09 5.40687086175523e-05 6.67382390144369e-05 1.08232612519313e-05 1.7397489598795e-07 XM_005219359.1 CCDC9 PREDICTED: Bos taurus coiled-coil domain containing 9 (CCDC9), 0.0 3050 100.00 0.77772664519098 NM_015603.2 CCDC9 Homo sapiens coiled-coil domain containing 9 (CCDC9), mRNA. 0.0 1862 84.14 0.77772664519098 TCONS_00084107_5 sp|Q9Y3X0|CCDC9_HUMAN CCDC9_HUMAN Coiled-coil domain-containing protein 9; 0.0 671 80.27 0.936594202898551 1 coding 0 0 0 0 0.14364258906197 0.280517200399938 0.0411765782142868 0.469164727052509 CGGGAGCTGCAGACGCGGAGGCCGACGGAGCCGGAGTAGCGGACGCCGCGGGGTCTCCGGGACAGGAGCCCCCAGTGCTGTGTCCAGATTCTGCAGGGGAGGTTTGCTGGGACCCAGGTCCCACCCTGCCAGTGGAATGTCAGCCGCACTGGATCTGAAATCGAAGGAGGAGAAGGATGCTGAGCTGGACAAGAGGATCGAGGCTCTTCGGCGGAAGAATGAGGCCCTCATCCGGCGCTACCAGGAGATTGAGGAGGATCGGAAGAAAGCTGAACTGGAGGGAGTAGCAGTGACAGGTCCCCGGAAGAGCCGCTCGGTGGAGAAGGAGAATGTGGCAGTGGAGAAGAACCTGGGTCCTTCCCGGAGGTCTCCAGGGACCCCTCGGCCTCCAGGGGTCAGCAAGGGAGGCCGGATCCCCCCTCAGCATGGAGGCCGGGCAGGCATGGGCCGGACATCCCGCAGCTGGGAAGACAGTCCCGGGGAGCAGCCTCGGGGAGGTGCTGGGGGCCGCAGCCGGAGGGGTCGGGGCAGGGGGTCCCCTCATCTCTCTGGAGGTGGCGATGCCTCGACTGCCGACCGCAAATCCAAGGAGTGGGAGGAGCGGCGGAAGCAGAACATCGAGAAGATGAACGAGGAGATGGAGAAGATTGCAGAGTACGAGCGCAACCAGCGGGAAGGCGTGCTGGAGCCCAACCCGGTGCGGAACTTCCTGGACGACCCCCGGCGACGCAGTGGGCCCCTGGAGGAGCCTGAGCGGGACCGCCGGGAAGGCAGCCGCCGGCACGGGCGCAACTGGGGGGGCTCTGACTTTGAGCGGGTGCGCTACGGCCTCGAGCAGGAGCGGCAGGGCCGCCGGGCCGGCCTGGGCGGCGCCGGGGACATGACGCTCTCCATGACTGGCCGAGAGCGGTCTGAGTATCTGCGCTGGAAGCAGGAGCGGGAGAAGATAGACCAGGAGCGGCTGCAGAGGCACCGCAAGCCCACCGGCCAGTGGCGGCGGGAGTGGGATGCTGAGAAGACGGATGGCATGTTCAAGGATGGCCCAGCTGTGGCCCTGGAACCATCCCACCGCTATGATGACCAGGCTTGGGCCCGGCCCCCCAAGCCCCCCACTTTCAGGGAGTTCCTGTCCCAGCACAAAACTGAGGTCAGCCGCAGAAAGAAGAAGAGCAGCCGACCCCAGCCTAAGGCGGCGCCCCGTGCCTACAGTGACCACGATGACCGCTGGGAGATGAAGGAGGCCATGTCCACAGCTCCTGAGCCCCCGCAACCTGCTCTCCCCAAGGAGGCGCCCACGCAGCTGCCTGAGACCCCAGCCCCTGCCCATCGACCTCCTGAGGATGAGGGCGAGGAGGGCGAGGATGAGGGGGAGGATGAGGAGTGGGAAGACGTGAGTGAGGATGAGGAGGAGGAGGAGGAGATCGAGGAAGAAGAGGAGGCTGATGATGAGGAAGAAGAACCAGCCGGAGATCACCAACCCCAGGAGGCTGAGCCCAGCGGGAGCCCCGCCAGGGAACATGGTGACAAAGAGACCGCCAGGCCGGAAGAGCCCCTGCCGCTCCCCCAGGCCCCTGCCACGCCTTCCAGCCCCTTCTCGCCCCCCGGGGGCCACCAGCCTGTGTCCGACTGGGGTGAAGAGATGGAGCTGAATTCTCCCCGGACCGCCCACCCGGCAGATGCTGTCTCTCCGGAGGCGGACCCCGAGGGCCAAGAGACAGCAGAGATCGCCGACTTCCAGAGGGTGCGTTTCTGCAAGGTGGTAGCGGCCGCTTCGCCACCGGGGGCCGCCCGCTGACCGCGCCCGCCGACTGCGGCCTTCGCGCTCTGCACTAACCTTCCGCCGCCTCGCTCCTCTACCCTCTGCTTCCGCCACTCCAGCCAGGAGAGGGTTAAATGTAAGGGCGGGGGGAGGAGCCAGGGATAGTGAACCGGGTGGGGCCAGGGCAATAGTCCAGTCTCACAAATAGGGGGCGCCGTGGCACCAGGGTGTCTTGAGACACCCCTGAGTTACCCACTTTTGGAGGCCATGGGGGTATAGGTGCCAGTTCCCGGGCCGTTTTCCGCCTCCAGGAGCTTACATCTGGGGCATGGCTTAATAACCGGTGACTCTTGACGGACCTGATTTCCCCGGCCGCAGAACTGGTCCTTATTAAACGCAGTGCTTCCGCTAACC EMBV3_33882 TCTTCCTTTTGTGTTTCTGCCCTTTCCCCCGCCCCCAGGTTACGAGAAATCCCGCAGCCT Gene GeneID:617852|LOC617852:XR_083932:929_cdna Constitutive 0 NULL GeneID:617852 18 PSEUDO LOC617852 NULL similar to Shaw-related voltage-gated potassium channel protein 3 EMBV3_34242 CTCAGCTGCCTTGTTTACCGAGCTGATACCCAAACTGTTCATACCTGCTTTATAACATCC Variant GeneID:508901|ERH:NM_001034336:73_cdna 266^612 1 EMBV3_00559 GeneID:508901 10 GENE ERH MGC128307 enhancer of rudimentary homolog (Drosophila) EMBV3_18586 CATCACCCCAAAAAGAAATTCCATACCCTTTAACAATCACCTTCATTCCTCCCAGCCTCC Gene BVV0102_198324 + 1 EMBV3_12358 GK000026.2:22311735-22375028 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06759 CTTCCGCGTGGTGTACCTGCTCTCTTTGGATATGGACTTTTCTACGGTGGGACACTAAAC Gene GeneID:616218|GALNT2:XM_002698765:24_cdna Constitutive 0 NULL GeneID:616218 28 GENE GALNT2 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) EMBV3_03868 GGCCCCCACACCCCGTGCGATGATTTCTGTGAAATTTTGCAGTAGCGACGACATTGTTTT Gene GeneID:100137759|LOC100137759:XR_084728:74_cdna Constitutive 0 NULL GeneID:100137759 29 PSEUDO LOC100137759 NULL similar to beta-1,4-N-acetyl-galactosaminyl transferase 4 EMBV3_23885 CTGGAATGGCCGTTTCTGGTTTGCTGCTCATCTTCTGCATCCTGGAGGTGTTCATTGCAA Gene GeneID:415111|MS4A8B:NM_001034056:152_cdna Constitutive 1 NULL GeneID:415111 29 GENE MS4A8B MGC127193 membrane-spanning 4-domains, subfamily A, member 8B EMBV3_14121 CATAGAGCATTCAGGCTCCAGGATGACCGCCGAGAAGTTTCTGAACAGGCTCCCCAAATT Gene GeneID:515112|LOC515112:XR_084675:372_cdna Constitutive 0 NULL GeneID:515112 2 PSEUDO LOC515112 NULL similar to SOCIUS protein EMBV3_04393 CCCTCCCAGCCCAGGCACCACTCAATGGAGGCTGCTGCTCCTACGGGGGAGTTCAATACC Gene BVT0102_372530 - 1 EMBV3_07539 GK000003.2:102310398-102421542 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18234 CTTGTTCGCAAGGAGCCTTAGAGTGTCGCTTGATTGAACATCACGAGTCCATTTACTCCC Gene BVV0102_189949 + 0 NULL GK000030.2:138472331-138703828 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18140 CCACCCCTAAGAAACCCAAGAAGGCTGCAGGAGCAAAGAAAGCCGTTAAGAAGACGCCTA Gene GeneID:527304|LOC527304:XM_002697465:95_cdna Constitutive 0 NULL GeneID:527304 23 GENE LOC527304 NULL similar to Histone H1.5 (Histone H1a) EMBV3_34404 AGGTTTCCAAATACGGTGACCTGGCTAACTGGATGATACCCGGCAAGAAGGTGACAGGCA Gene GeneID:782973|OXCT2:NM_001098153:334_cdna Constitutive 0 NULL GeneID:782973 3 GENE OXCT2 NULL 3-oxoacid CoA transferase 2 EMBV3_42364 GTACCCGCAGAAACAGAGATTCAGCATCCCTGCTCTATCTCTCCCAGTCAAGTGCGTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41258 GTCTCATTCAAGTAATAAACGGAATGCTTGGAGGTATCTGTGGTCATTGTTCCTCTCGCC Gene GeneID:533038|TM4SF1:NM_001075980:41_cdna UTR3_Alt 2 NULL GeneID:533038 1 GENE TM4SF1 MGC139884 transmembrane 4 L six family member 1 EMBV3_24839 CCTTCCAAGGCAAGCTGATAACTCTCCCCGAGCGACGGTGCCGCAATATTAAGAAACCAA Gene GeneID:518395|ADAMTS18:XM_002694733:100_cdna Constitutive 0 NULL GeneID:518395 18 GENE ADAMTS18 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 18 EMBV3_10574 GAGACGCTGTGCTATGTTGCCTTGGAACCAGAGAAAGAACTCTGTAAGAAGCCAGAGGAG Gene GeneID:539271|ACTRT1:XM_002699513:23_cdna Constitutive 0 NULL GeneID:539271 X GENE ACTRT1 NULL actin-related protein T1 EMBV3_40551 GTCCTTGAGAAGGCAAGCGCAAGCCCATTGATTCATCAGGCTTTTGCCAGCTGTTTTTAG Variant GeneID:511744|PSTK:XM_002698558:68_cdna 219^510 1 EMBV3_00804 GeneID:511744 26 GENE PSTK NULL phosphoseryl-tRNA kinase EMBV3_43146 GTGCTGGTACTGCAATTAAGAGTGAGTAGATATAGTTGGTGGGGAAGTCTTTCTGATCTC Gene BVV0102_264895 + 1 EMBV3_10168 GK000021.2:58441798-58454562 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121742 TCONS_00121740 TCONS_00121743 TCONS_00121744 TCONS_00121747 TCONS_00121746 TCONS_00121745 TCONS_00121741 1 XLOC_073465 Coding TCONS_00121740 XLOC_073465 Coding Coding BTBD7 21:58451278-58476912 j TSS90609 6534 1 TCONS_00121740_2 650 8 0.745406312175711 0.00135489542841108 0.00219674389726945 0.00118468418938412 0.000649404655157695 0.000862401345429974 4.95831374844155e-24 0.000258473465346462 3.97557529842592e-10 0.000775000809588627 0.000772715700993087 0.000275672476564126 0.000104280536500187 0.000350852275748221 0.000912751158096087 0.000610069720333 0.00272875051164966 0.00152144013780739 0.000372216715404232 0.00078010846281146 0.00107634434254412 0.000170729527098564 3.29688421462692e-06 5.11684461874703e-09 0.000471546439111906 0.00119840536598474 0.00105584986596194 0.00100498569971903 1.62506382805595e-06 0.000230941896197025 0.000654017520886109 XM_003585089.2 BTBD7 PREDICTED: Bos taurus BTB (POZ) domain containing 7 (BTBD7), 0.0 1.168e+04 100.00 0.991276400367309 XM_005267846.1 BTBD7 PREDICTED: Homo sapiens BTB (POZ) domain containing 7 (BTBD7), 0.0 3743 89.07 0.434496479951025 TCONS_00121740_2 sp|Q9P203|BTBD7_HUMAN BTBD7_HUMAN BTB/POZ domain-containing protein 7; 0.0 1204 93.15 0.998461538461539 0 coding 0 0 0 0 -0.00175154296576165 0.992936912538881 0.0157291405836126 0.785100013590503 ACCAGCCCCAGTCCTAACCAGCGATTCCCCAAAGGGGTTGTGGCAGTAGGCAAGGCAAGTGAACAAGATATCCTTAAATATCTGATTAAATGGGGTGAGCATCAGTTAATGAAGAGAATAGCAGACAGAGAGCCAAACTTACTGAGTGGCACTGCTCACAGTGTGAACAAGAGAGGTGTGAAAAGACGGGACCTGGACATCGAAGAGCTTAGAGAGATCCTTTCCTCTCTCTTACCTTTTGTGCGAATTGAACACATCTTGCCTATAAACAGTGAAGTCCTAAGTGATGCAATGAAAAGAGGCTTGATTAGTACTCCTCCATCAGATATGCTTCCTACAACAGAAGGTGGAAAGTCAAATGCCTGGTTACGGCAAAAAAATGCTGGAATCTATGTTCGTCCTCGGCTGTTCTCTCCCTACGTAGAAGAAGCGAAGTCAGTGCTAGACGAGATGATGGTGGAACAAACAGACCTTGTGCGTTTGCGAATGGTTAGAATGTCCAACGTGCCAGACACGCTTTACATGGTCAGCAATGCCGTGCCTCAGTGCTGCCACATGATCAGCCACCAGCAGATCAGCAGCAACCAGTCGAGCCCTCCTTCAGTGGTAGCAAACGAAATCCCAGTTCCTCGCCTCCTCATTATGAAGGACATGGTCAGACGTCTGCAGGAGCTACGGCACACTGAGCAGGTGCAGAGGGCCTACGCGCTCAACTGCGGGGAAGGCGCCACGGTCAGCTATGAAATTCAGATCCGCGTGTTAAGGGAGTTTGGGCTTGCCGATGCCGCAGCAGAACTCTTGCAGAATCCTCACAAATTCTTTCCTGATGAACGATTTGGAGATGAAAGTCCACTCTTGACAATGAGACAGTCTGGGAGATGTCGAGTTAACAGCACCCCCACTGCAGAAACCATGTTTACAGATCTGGACTCTTTCGTGGCCTTCCATCCACCCTTACCCCCTCCACCGCCTCCCTACCACCCGCCAGCAACCCCAATCCATAACCAGCTCAAAGCAGGCTGGAAGCAAAGACCTCCCAGTCAGCATCCTTCACGTTCGTTTTCTTATCCCTGTAATCACTCACTGTTTCACTCCAGAACAGCCCCTAAAGCTGGCCCCCCTCCAGTCTACTTGCCAGGTGTGAAAGCGGCAGCCCCTGATTGTACCAACACCACAGGACTGGGGAGACAGACGGTGGCTGCTGCTGCCGCTGCCGCCTCAACAACAATAGCATCTGAAAAACAAGTGTGCACACAACCTGTGCTAAACGATCTAATGCCAGATATTGCCATGGGTGTATCCACGCTGTCACTCAAGGACAGGAGGCTTCCAGAACTTGCTGTGGACACAGAATTAAGCCAGGCAGTTTCTGAAGTAGGACCAGGGCCTCCCCAGCATCTATCGTGTATTCCACAGAGGCATACACACACATCTCGAAAGAAACACACACTAGAGCAAAAAACAGATGCTCGAGAAAATCAGCAGGAATATCCGGATTTCTACGACTTCTCAAATGCTGCTTGCAGACCATCTGCTCCTGCCCCTGGCAGACGGACCCCCTCCCCTTCACAAGGTGGATATTTTGGTCCCGATTTGTATAGCCACAATAAGGCATCACCAAGTGGCTTAAAGTCAGCCTACCTACCAGGCCAGACCTCGCCTAAAAAGCAGGAAGAAACTAGGAAAGAATATCCACTTCCCCCCGACGGGCATCCACACAGACAGAAGAGTGAGCCGATACACCTCGACGTTGTTGAGCAGCCTCCCCAGCGGCCAGATTTTCCCTTGGCAGCCCCAGAAAATGCCGGCAGTGGTTCAGCCCATGTCAGGGGGCGAGCAGCAGTGGAAACTGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACATTCTGCATGTAGCTCTGAAGCTCCAGAAGAGAGATCCGGCAGAAGACTGGCAGATGAGTCCCTGGGCCATGGAGCTCAGCGAAATACAGATTTGGAAAGGGAAGATTCAGTCAGCAGAGGAAGGAGGTCCCCCAGCAAGCCAGACTTCCTCTACAAAAAGTCTGCCCTTTGAGAGCAACCTCCAAGTCGTCCGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTAGAGACCAGTTTATTGATGCCAGCTGATAACTCAGTTTCACGTTATTTTATTCTAGTTTTTGTATATACATGTTTATTAGACATGGCATGCTAAGAGGGTTATTTTGAATGCTGCATCTGCTGTCTGTTTTGTGTTTGAACAATTGTGTGGGGAAGCATTTTTAAGAACAAGCAAGCTGGCACTTTTTTTTTTTTCCCCTCTCTTCACAAACAATGGGATTTTTTTGCACTTGTACCTTTGTTTTATCTGTATTGGTTTTATATCAGTATGTTAAACTTTATTGCCACATTTAAAGGACTGTATTTTCATACTTTTTTGCATTTTACCTTTCATCTACCTATTTCCACGTGCATTGGATTGCACACTAAGATGTATTTTCTTATGAAATAGTTCTGTGTTTATTTTTTAATTATAGAAATTCCAAAGAACAGCACATCAAAAATGCTCCTCTCTTTTCTGTAGTTGTTTCAGTTCAGAAACCTTCCTGCTCAGTCTTCATAAATCTTATGTCATCCTGTTTAAATAAGTCCTGGGAGCTGGTCTGCATTCCTCCAGCAGGAGTCCAATCAGGAATCCTGAAGTTTTCCTGGTTCAGGAAAGAACAAGAAGGAGAAAAAGCCTTCTGCATCCAGGCAAAAGCTTGTTGTTTTATCCACAGTACAGACTCTGTTAGAATCACTGCAGGTTCTGGTCATGTGGATTAGAGTTTCACTAGATGAGGTTTGAAAGAGATCAGCTTTCTTGGAATCCTAAAGCAGTGGAATTAGTAACTTAAGCTTGCACTACGGGATCGCTGCTTCTGAGCATCGACTCAGCAGCTGAGTGGGGAGTGACTGCTTGCTGCCTTCAGTTGTCCTGCTCTCTTGTGGGGGGGAAAAAAAACAAAAGGGCTTCAGTCTTACGGATGTCATTTGTTGTTTGTAAGTAGATGTTTTAAGTGTTTTTCAAAGTGTGTCCGAAGTTTGGTGTCCTTTAAAAAGTTATTGTATAATGCATAATGCTTTGTCACCAAAAAAGAAAAACCATTTTTTTTTCCAGTGAAACACTACATGTCCTACTTGAACTCCACTGGGGATGCTGGTTTGGGATTTTACTGAACCACTGAGCACATGGGGTCTTTTAAGATCCTTTCCCTTAGAAGGGCAATGTGTGAGCTAAGGACTGTTTTTTTCTTACTCTCCAATGTAAATATATTAGCATTTGAGTTTTTAAATCACTTCAACATTATTTGAGCATTCACTTTGTATTTTTACACATAACACACATACAGCCGTAGCACTTAGATTAAAAGAGACTTTTCTGAGCACTCCCCTCACTTGAGGGATGTTCGGGAGCCTCCTCTCTGTGTATGTGTATATACATATATACAACTCTGAATCACTCACACTCACTCTAAAACTATGCAGGGCTAGGGAGCCTTTACAAGCTACCATATAAATGAATTACATGCACTTTTAAGTAAATAGGTTTCTATTGGATGTCAGCAGCTCTGATTTTTCCCGAAACTGTAGTTTCTCTTACAGTCTCTTCCTACTTTACCCTGTGGATACACACTCAGGAATAATCTGACATTTTAAAAAATCCTAACAGTAGATAGTCTCAAAGATGGGAACACGTCAGTTGATCTGTCTACACCGGCAAACCGCCGCCACTCGCTCTGCTGCCTGGCTAGTTAGCTGCTGCCCACGCATCCGTCCATGTTGGCCACGCTGCACACCAAGCCCTGGGTCTCCCAGAGTCAGCACCAGGCCGCTGCGAGGTTGGCTGCATATCATCGCCTCTGAGGCTCCTTTTTGTTTTGTTTTGTTTTAAGATGAAAAACTTTAGGACTCTGTTCTCATTTTTAGGAGGTTTCACCTTTTGTAATAAGATGACAGTGTCTTTTGAAACTAATCTCGGTCTGTCTCCCCTCAGAAACAAAAAATATTCATTCCATCACATTCCTTAAGGTGTATTTATGTACATGTGTTGACATGAATTCTCTTGATACAGTTTTAAACTTCTCTTCTGAATTCAGACTGTGCTGTGCTGGTACTGCAATTAAGAGTGAGTAGATATAGTTGGTGGGGAAGTCTTTCTGATCTCCAACCTGTTTTTTTTTTTAAAGACATAAGAGCTATTGATGCCCCACATGGCGTATTTCTGAAAATTTATTAAATATTCTTTCGAGTCCCCAAAATATAAAAGAAGTGACCCACTGTTTGTAGTTTTATTTAATTTATGAAGTTTGTTTTTAATAATTTGGTAGCATACCTGGCTGAACTGTGTATAGAGAGAAACGTGCTGTGGGACTGTGGACTGCTGTGACTTGCAGAAGGTGAACAGATGTGGGTTTTGTGTTAGGGTAGGGTTAATGGATTTTTAATGTGTCTCGTGAAGTATGGTCAGTAGGGTAGGTTGAATAGCTGTGTGCCTCTGGCTTTTGACCCCATCTCTTCAATCTTTTTTAATGCTTCTTAAGCATTAAAATCTTTCAGTGCTGTACTAAGATAAATGTGAAGTCTGAGTAAGATTGCTCTGAGAAATTAACGTGTATAATATGAGACTTAGGCCCTAGGACCTAGTGTTTTACTCAGTGTAGAAACTTCCTGAGAACCAAATCTCAACACACCAGATCTCCTCTTGAGGCCGTGGACAATCAGGCCATTAGACAATCGCCACTTTTGGTGCCCGCCATGTTGAGGTTGGCGAATGCCAGTTAGATCCTGGAGCGGAAGCAGAGGATCCATGTTTCTTCAAGATGCTGTTGGTCTTGTTCTTATATTTTTGTTTTAATTCTGTGATCTTGATTAATAATTTCAGCTCAGAGTCATAGGTATGACTCCTAAGGGGAAAAGATAGCAGCAAGAAAGGCAAAACTTACTCGTGAAAAAATAATCATTGGCCTTGTCCACGTACCATGCATAACCCTTCTCAGTGCCCCTGTAGCTTTTTCTAGGCACATCCCTAGACCTAAGCTTTCCTGACATTTCGGTAACCAGGTAGATTTTAAGGATTTTAAATGACTTCTTTTTATTTGAGTTTTTTTGTTATTGTTGAACTCTCTGTGAAACTTTACCTAATTCTTGTTTATGCTTCCTTAAAAAAAAAACTTGTTCATTGGGTTTTCTTTGGATTTGTTCTTCAAACTTGAGTAGCAGTGGACAGCACTAGTCCATTGATGGAGGGAAACCAGCACATACGGCCTCAGCAGGGGCACAAAGCTGACCCCTCCCCGTGTGTCAGTCTCTGGAAGTCTCAGTAACGACTTGGCAAAATATGTATTTTCATGTTTAAATCTACCTTTTAGGGAAAATAAGTTTCATGAAACACTTATAAGATACTTGTTTGCAATTCTAAAGCATTTATGTTTTTATCTTAGGACTGAACTCAAAGGGAAATGTTTGACTTTTCATTTTTAATTATTTGGTTGACCTTTAACTTCCTGTTGAAAGTTCCTATTAAAGCAGCAGTGATGGGTGCTACTCCCGTTCTGCAGTGGTTTACTTTGTCTACTAAGGAGTTTACTTTCAAACCTCATTACAGATAACCTTACTAAAAGAGTTACCGTCACACACTAAAGGGTATCGTGCTGTTTTTCCATTAACACTATTGTGTAAACAATGTTCTATGAAATGTTAAGTTGTTTCTTTGTCCTATTGATTGCAATAGCTGTTATGTAATTGTATTGGCAAGTCTGATTTTTTTTTTTCCTCTAGAAAACCCTCAGACCATGAATCAATCTTCCATATTCTGAATATTATAATGCTGTGGCCATTTCTGTAGAAAGATGACTCGCAAGTGTGTATCTTGAAAGTGACCTCTTGTGTTTGCGTGTTTACGTGGGTTCTGTCTTAAGAGCTGAGAGGAGCTCTGGAAGCTTCATGGTGAACCTGCACATGACTGTGTGGGTTCCACGGGCAGGTGGGACGGAACCTCGCTCTTAGGTGGGGTGGCTGAGAGGGAGACTCCTGAACTCCACTTGCTGTTGATGCGCCACGTCTGCACTCGAGAGAGGTGGTGTCTTCTGCAACACTGCATTGCTTGTGGTTGTGCTGTTACTGGTATAAAGTCAAGTGCCTTCAATGCTAAAGGCTCAGAAATTTTTCTTAAAACTGATTTCATGTCCTATGCAAGTGTTTTCTACAACCTGCATAACCAGTACTTTGTAAAACTTGTTTACGCTTCGACTGTACATAGTGTTTTTTAAAGAAATACATAGTATTTTTATTTAGGTACCTCCGAACTTGAACTCGTCTGTGGGAAGCATTGTAAAACGATCGATCCATTTCTCTTTTGAGTACCATTACGGTTGTACAAAGGTTTTCACTGGTTCTATTTTTCTACTGTTACTGACAAGCATGTAACACTGACTTTATCCTACATATAGTTGGCGTTTCAAATAAATGGCTTGGATAGAACTCG EMBV3_19026 TAAAAAGGCAGCAATGCGATTTGTACAGACCCCGCCATCTAGTCCTGTAAGAGCCTCCTC Gene BVT0102_228027 + 0 NULL GK000022.2:47717180-47721359 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128782 TCONS_00128785 TCONS_00128778 TCONS_00128780 TCONS_00128786 TCONS_00128781 TCONS_00128790 TCONS_00128789 TCONS_00128777 TCONS_00128787 TCONS_00128779 TCONS_00128784 TCONS_00128788 TCONS_00128783 1 XLOC_077941 Coding TCONS_00128780 XLOC_077941 Coding Coding CACNA1D 22:47719116-48048364 j TSS95947 8427 1 TCONS_00128780_8 1907 46 0.974544946499133 5.30784710222457e-08 2.83304212958198e-15 0.00015240743636223 4.44338480627564e-07 8.9147555958653e-50 5.20730982047436e-63 0.000105324328936171 5.01648842518123e-06 2.75152556930441e-24 2.90382288035928e-05 8.86392611335439e-30 2.49512292106679e-05 1.52029240540871e-52 0.000139790099326264 8.39246249776925e-12 0.000215950947575735 1.24833803892015e-06 0 3.25253643911391e-31 1.18570310396023e-31 2.90072291333021e-10 2.04768002674748e-19 4.40931171889036e-12 0.000175048701423603 7.82124718073633e-08 0.000333612771610354 0.000209396676274732 1.73181913040575e-05 8.68119962427347e-41 9.25302239249254e-06 XM_005222717.1 CACNA1D PREDICTED: Bos taurus calcium channel, voltage-dependent, L type, alpha 1D subunit (CACNA1D), transcript variant X3, mRNA. 0.0 1.289e+04 98.94 0.865788536845853 NM_000720.3 CACNA1D Homo sapiens calcium channel, voltage-dependent, L type, alpha 1D subunit (CACNA1D), transcript variant 1, mRNA. 0.0 8753 91.08 0.737273050907796 TCONS_00128780_8 sp|Q99246|CAC1D_MOUSE CAC1D_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1D; 0.0 3507 94.89 0.999475616151023 3 coding 0 0 0 0 0.00762547442345634 0.958688684579117 -0.0190255329492766 0.788469779670062 GCCGGGCCTCATAGGCCGCTGGCGTCTAAACGCCGGGTAGCGCGACGCCGGGACCTCCAGGAAAAAGTAGAATATGCCTTCCTGATTATTTTTACAGTCGAAACATTTTTGAAGATTATAGCATATGGATTATTGCTACATCCTAATGCTTATGTTAGGAATGGATGGAATTTACTGGATTTTGTTATAGTCATAGTAGGATTGTTTAGTGTAATTTTGGAACAATTAACCAAAGAAACAGAAGGCGGTAACCACTCCAGTGGCAAATCAGGAGGCTTTGACGTCAAAGCCCTCCGCGCCTTTCGAGTGTTACGACCACTTCGACTAGTATCAGGAGTGCCCAGTTTACAAGTTGTCCTGAACTCCATTATAAAAGCCATGGTTCCCCTCCTTCACATAGCCCTTTTGGTATTATTTGTAATCATAATCTATGCTATTATAGGATTGGAGCTTTTTATTGGAAAAATGCACAAAACATGTTTTTTTGCTGACTCAGATATGGTGGCTGAAGAGGACCCAGCGCCGTGTGCGTTCTCAGGGAACGGACGCCAGTGCACCGCCAATGGCACGGAGTGTAGGAGTGGCTGGGCTGGCCCCAATGGCGGCATCACCAACTTTGACAACTTTGCCTTTGCCATGCTCACCGTGTTTCAGTGCATCACCATGGAGGGCTGGACAGACGTGCTCTACTGGATGAATGATGCTATGGGATTTGAATTGCCCTGGGTGTATTTTGTCAGTCTCGTCATCTTTGGGTCATTTTTCGTACTAAATCTTGTACTTGGTGTATTGAGCGGAGAGTTCTCGAAGGAAAGGGAGAAAGCAAAAGCACGAGGAGACTTCCAGAAGCTCCGGGAGAAGCAGCAGCTGGAAGAGGATCTTAAGGGCTACTTGGACTGGATCACCCAAGCAGAAGACATTGATCCTGAGAATGAAGAAGAAGGAGGCGAGGAGAGCAAACGAAATACCAGCATGCCCACCAGTGAGACGGAGTCTGTGAACACAGAGAACGTGAGCGGGGAAGGCGAGAACCGAGGCTGCTGTGGGAGTCTCTGGTGCTGGTGGAGAAGAAGAGGCGCTGCCAAGGCCGGGCCCTCTGGGTGTCGGCGCTGGGGTCAAGCCATCTCAAAGTCCAAGCTCAGCCGCCGCTGGCGCCGCTGGAACCGCTTCAGTCGCAGAAGGTGTAGGGCTGCTGTGAAGTCCGTCACGTTTTACTGGCTGGTCATTGTCCTGGTGTTTCTCAACACCTTAACCATTTCCTCCGAGCACTACAACCAGCCTGACTGGTTGACACAGATTCAAGATATTGCTAACAAAGTCCTCTTGGCTCTGTTCACCTGTGAGATGCTGGTCAAAATGTACAGCTTGGGTCTCCAGGCGTACTTTGTCTCTCTTTTCAATCGGTTTGATTGCTTCGTGGTGTGCGGCGGAATTACCGAGACGATCCTGGTGGAACTGGAAATCATGTCTCCCCTGGGCATCTCTGTGTTCCGCTGTGTGCGGCTCTTGAGAATTTTCAAAGTGACCAGGCACTGGACCTCCCTGAGCAACTTGGTGGCATCCTTGTTAAACTCCATGAAGTCCATCGCTTCGCTGCTGCTTCTGCTTTTTCTCTTCATCATCATCTTCTCCTTGCTGGGGATGCAGCTGTTTGGCGGCAAGTTTAATTTTGATGAAACGCAAACCAAGCGGAGCACCTTCGATAATTTCCCGCAAGCCCTTCTCACAGTGTTCCAGATCCTGACAGGCGAAGATTGGAATGCTGTGATGTATGACGGTATCATGGCGTATGGGGGCCCATCATCTTCTGGAATGATCGTCTGCATCTACTTCATCATCCTCTTCATTTGCGGTAACTATATTCTACTGAATGTCTTCTTGGCCATCGCTGTAGACAATTTAGCTGATGCTGAAAGTTTGAATACTGCTCAGAAGGAGGAAGCTGAAGAAAAGGAAAGGAAAAAGATTGCCAGAAAAGAAAGTCTGGAAAATAAAAAGAACAACAAACCAGAAGTCAACCAGATAGCCAACAGTGACAACAAGGTTACCATCGACGACTACAGAGAAGAGGATGAGGACAAGGACCCCTACCCACCCTGTGATGTGCCAGTAGGTGAAGAGGAAGAGGAGGAGGAAGAGGATGAACCTGAGGTTCCTGCTGGCCCCCGTCCTCGCAGAATCTCTGAGTTGAACATGAAAGAGAAAATCGCCCCCATCCCGGAAGGGAGTGCTTTCTTCATTCTCAGCAAGACCAACCCGATCCGCGTGGGCTGCCACAAGCTCATCAACCACCACATCTTCACCAACCTCATCCTTGTCTTCATCATGCTGAGCAGCGCCGCCCTCGCCGCTGAGGACCCCATCCGCAGCCACTCCTTCCGGAACACTATACTGGGTTACTTTGACTATGCTTTCACAGCCATCTTTACTGTTGAAATCCTGTTGAAGATGATGACCTTTGGCGCTTTCCTCCACAAAGGCGCTTTCTGCAGGAACTACTTCAACTTACTGGATATGCTGGTTGTTGGGGTGTCTTTGGTGTCATTTGGCATCCAATCCAGTGCCATCTCTGTTGTGAAGATTCTGAGGGTCCTAAGGGTCCTGAGGCCTCTCAGGGCCATCAACAGAGCGAAAGGACTTAAGCATGTGGTCCAGTGTGTCTTCGTGGCCATCCGGACGATTGGCAACATCATGATCGTCACCACGCTCCTCCAGTTCATGTTCGCCTGCATCGGGGTCCAGCTCTTCAAGGGAAAGTTCTATCGCTGCACAGACGAAGCCAAAAGTAACCCCGAAGAGTGCAGGGGGCTCTTCATCCTCTACAAGGATGGGGATGTTGATAGTCCTGTGGTCCGTGAGAGGATCTGGCAAAACAGTGATTTCAACTTTGACAACGTCCTCTCGGCTATGATGGCTCTGTTCACAGTCTCCACGTTCGAGGGCTGGCCCGCGTTGCTGTACAAAGCCATCGATTCGAACGGAGAGAATGTGGGCCCCATCTACAACTACCGTGTGGAGATCTCCATCTTCTTCATCATCTACATCATCATTGTCGCATTCTTCATGATGAACATCTTCGTGGGCTTCGTCATCGTCACATTTCAGGAGCAGGGAGAGAAAGAGTATAAGAACTGTGAGCTGGACAAAAATCAGCGTCAGTGTGTTGAATACGCCTTGAAGGCACGTCCGCTGCGGAGATACATCCCCAAAAACCCCTACCAGTACAAGTTCTGGTACGTGGTGAACTCCTCGCCTTTCGAATACATGATGTTTGTCCTCATCATGCTCAACACACTCTGCTTGGCCATGCAGCACTACGAGCAGTCCAAGATGTTTAATGACGCCATGGACATCCTGAACATGGTCTTCACTGGGGTGTTCACTGTCGAGATGGTTTTGAAAGTCATTGCATTTAAGCCTAAGGGGTACTTTAGTGACGCCTGGAACACCTTTGACTCCCTCATCGTAATCGGCAGCATTGTAGACGTGGCCCTCAGCGAAGCCGACCCAACTGAAAGTGAAAGTGTCCCTGTCCCAACCGCTACACCTGGGAACTCTGAAGAGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTTTCCGAGTGATGCGATTGGTGAAGCTTCTCAGCAGGGGGGAAGGCATCCGGACGCTGCTGTGGACTTTTATTAAGTCCTTCCAGGCGCTCCCGTATGTCGCCCTTCTTATCGCCATGCTGTTCTTCATCTACGCGGTCATCGGCATGCAGATGTTCGGGAAAGTGGCCATGAGAGATAACAACCAGATCAACAGAAACAACAATTTCCAGACCTTTCCCCAGGCGGTGCTGCTGCTCTTCAGGTGTGCGACGGGGGAGGCCTGGCAGGAAATCATGTTAGCCTGCCTCCCGGGGAAGCAATGTGACCCCGACTCGGATTACAACCCCGGGGAGGAATACACATGTGGGAGCAACTTCGCCATCGTTTATTTCATCAGTTTTTATATGCTCTGCGCATTTCTGATCATCAACCTCTTCGTGGCTGTCATCATGGACAATTTTGATTATCTCACCCGGGACTGGTCTATTCTGGGGCCTCACCATTTAGATGAATTCAAACGGATCTGGTCTGAATATGACCCCGAGGCAAAGGGCAGGATCAAGCACCTGGACGTGGTCACTCTGCTCCGCCGCATCCAGCCTCCCCTGGGCTTCGGGAAGTTGTGTCCACACCGGGTAGCCTGCAAGAGACTAGTTGCTATGAACATGCCACTCAACAGTGATGGGACAGTCATGTTTAATGCAACTCTGTTTGCTCTGGTTCGAACGGCTCTTAAAATCAAGACTGAAGGCAACCTGGAACAAGCTAATGAAGAACTCCGAGCTGTGATCAAGAAAATTTGGAAGAAAACCAGCATGAAACTACTTGACCAAGTTGTTCCTCCAGCTGGTGATGATGAGGTAACCGTGGGGAAGTTCTATGCCACTTTCCTGATACAGGACTACTTTAGGAAATTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAATACCCCGCGAAGAACAGCACAATTGCCCTACAGGCGGGATTAAGGACACTGCATGACATTGGGCCAGAAATCCGGCGTGCTATATCATGCGATTTGCAAGATGATGATCCAGAGGAAACAAAACGAGAAGACGAAGAAGATGTGTTCAAAAGAAATGGTGCCCTGCTTGGAAACCATGTCAATCATGTTAATAGTGATAGGAGAGATTCCCTTCAGCAGACCAATACCACCCACCGTCCCCTGCATGTCCAAAGGCCTTCAATTCCACCTGCAAGTGATACTGAGAAACCGCTGTTTCCTCCAGCAGGAAATTCGGTGTGTCATAACCATCATAACCATAATTCCATAGGAAAGCAAGTTCCCAGCTCAACAAATGCCAATCTCAATAATGCCAATATGTGCAAAGCTGCCCCTGGAAAGCGGCCCAGCATTGGGAACCTTGAGCTTGTGTCTGAAAACGGGCATCATTCCTTCCACAAGCATGGCCGTGAGCCTCACAGAAGGTGCAGTATTAAAAGGTCTGACTCAGGAGACGAGCAGTTCCCGACGATTTGCCGGGAGGACCCGGAGATACACGGCTACTTCAGGGACCCCCACTGCCCAGGGGAGCAGGAGTATTTCAGCAGCGAGGAGTACTATGAGGATGACAGCTCGCCCACCGGGAGCAGGCAAAGCTACGGCTGCGGCTACTATAACTGGTACCTGGGCAGCAGCTTGGACTTTGAGTGGCCTCGAGGCTACCATCACCCCCAAAGCTTCTCAGAGGACGACGACTCGCCCGTTGGCTACGATTCCCGGAGGTCTCCGAGGCGACGCCTACTACCTCCCACCCCTACATCCCCCCGCAGGTCTTCCTTCAACTTCGAGTGCCTGCGCCGGCAGAGCAGCCAGGAGGAGGTCCCGCCGTCGCCCGCCTTCCCGCCCCGCACGGCCCTGCCTCTGCACCTGATGCAGCAGCAGATCATGGCAGTCGCCGGCCTAGATTCCAGTAAAGCCCAGAAGTACTCGCCGAGCCACTCCACCCGGTCGTGGGCCACGCCCCCGGCCACGCCGTCGTATCGGGACTGGACGCCGTGCTATACCCCGCTGATCCAGGTTGAGCGGCCAGAGGCCCCAGACCAGGTCAACGGCAGCCTCCCGTCCCTGCACCGCAGCTCGTGGTACACGGACGAGCCCAGCGTCTCCTATCGGACGTTCACACCAGCCAGCCTGACCGTCCCCAGCAGCTTCCACAACAAGAACAGCGACAAGCAGAGGAGCGCGGACAGCCTGGTGGAGGCAGTTCTGATATCCGAAGGCTTAGGACGGTACGCGAGGGACCCAAAGTTCGTGTCGGCGACAAAACACGAAATCGCCGATGCCTGTGACTTAACCATCGACGAGATGGAGAGTGCGGCCAGCAACCTGCTGAACGGGAACGTGCATCCGCGGGCCAATGGAGACGTGGGCCCCGTTTCCCACCGGCAAGACTACGAGCTCCAGGACTTTGGGCCTGGCTACAGCGACGAGGAGCCGGACCCCGGGAGGGACGAGGAGGACCTGGCAGACGAGATGATTTGCATCACCACCCTGTAGCCCCTGCAGGGGGCCGCTGACAGGCTCTGGCCTCAAGGTGGGGCGCCCGAGGGCCAGGGGAAAAGTGCCTCGTAGTTAGGAAAATTTAGGCACTAGCGCGGAGTCCCTGTTCGCAGTTAGAATTTTGTAACAAGTGATGTCATGCCTCAAGGAAGCCATAAACCTGGCAGGGGACAGCCGTGCCCCAGCTGTGTGGGCGAGGGCGGGTCCAGCCCTCCTGGAGAGGACCAGCGAGGAGGGTCAGACAGCCCTGCTGGCTTGTCTGGAGCGTTCGCCTGCAGCCCGCAGGCATGGGGTGGGAAAGGTTTAAAGGTGATGACGATCACCACACCTGTGTCATTACCTCAGCCATCGGTCTAGCATATCAGACGTTCACTGGGCCCAGCATATCCATTTTTAAACCCTTCCCCACCCCAAAAACACACTGCTTCCTGATTCCTGTTCAGCTGTTCTGAAATACAGTGTGTACGTCAGGACCAGCCTACCAGCCGTCATCCTGGGAGGGGAAGCAGGACCCTGTAAGCAGGGTTTTCTGTGACGTGATGCCAGTTTACAGGCAGGAGAGCGTCGCTCCGACAGTCGGATTTCTGACTGTCAGGCTAAGGGCAACTGTAAACTGGAATAATACTGCACTCGCAACCAGGTAAACTTAGATACGCTAGTTTGTTTAAAAATTATAGATTTACTGTACATGACTTGTAATATACTATAATTTGTATTTGTAAAGAGATGGTCTATATTTTGTAATTATTGTACCGTATTTGAAATGCAGCAATATCCATGGGTCCTAATAACTGTAGTTCCCCACTGAAATCTAGAAACTATTAGTATTTTTACTTGGGCTATACAGAAGTATAATAGAAGAAACAGAGCCAATTCTCATTTATTCAGTGAAAAGTCTTTTGGGGGTACAATCTTTAGTTCAGAAGAACTTGACACTACAGAGATTTTTCTAAAATATTTTGAGTCACTATAAATCTATCTTTACACAAGAGATTCCAGAGGACTATTTGCAGTCTTTTCTTTGGGCAGGGGTTCTGTGATTTGATATTGTAACTTTTGATCCACCATGGGTTGCAACTGTCTTTTGTTCTCCTTTAATAACCCCTCCGATGAGTTCACTGCAGAGGAGGTCGAGCTGGTTACTCGGACCCTGTGGCGTTCATTCACAGTCCTGGTTTCCTCAGCTGCCCCACAGGACATTCTGGCATTTCTGGTGCAGAAATAATGGCAGTGGTGAATGAGTCTCTCTGCTGCTGTCCCCCTGGGACTGGTAAGGCTGCGCGTCTGAGGAAACAGAAGAGTGCTGGAGGCTGGGGGACCGAGGAGGCAGAGGAGGCTCTTACAGGACTAGATGGCGGGGTCTGTACAAATCGCATTGCTGCCTTTTTACAGAACAGTGCTGTGCTGTGTGTCCTCTTGGAGGGCTTTTATATGCAACTGAATGAGGGCTGAAGTTTTCACTAGAATGCACTCGCACTCCAATTCTACTTCTCAATGAAAACCCACTTTGGGATCATCAGACCCATCAAGGCTTCCTTTTCTGTTCACAGAATTACACCAACTTTGTTGAGTTACCGTGGCAGGGATTCCCTGCGGTCAAAAAGACGAGTAGCAGTTTTTGGTTCAAAATTTTTAAAGAATACATGACCTGTTAATGTTAGTTTTTTTTCTTTTTGTAAATAACACTTTGTTATGAAGACCTTACAAACCTCTTCTTAAAGACATTCTTACTCCAGATCCAGGCAAAAACTTCAAGGTTTGTAAATGACTATTTCCTGACATAAATTCTTTTTTATTAAAATGCAAAATGATCTTCAGAATAAGGCTGTGTAAGAATTTTATTGTATTTGGGAGCTCTCCATGCACAGAGCTGGTGCTTGCCAGTGACAGCCTCCGGAGGAACAGGTACTCTGTGAGGGCACTGCTGTAATGATGTAGATTCTCTCTTATTCTCGTGGCTCCTTTGGTGCCCGTGGTAACTTAATTCCAGTTGCAGACAGCACCATTCTCCTAAAGGGCTAACCCACGGTCACCGTCATTTTGGACTCCATCTCTCCACTAAGTGTCGGTCTTAGCGTGTGGCTTCCCACTGTTAGTCCAAAACTGTCCTGCCAGGACCGAGTTTCCTGGCATAGTCGGTGATCTTTGCTAGTCAGCACTCAACGTGCCATTTTTACAGACTGCACCACTCCTAATATCTGTCTGCATTACACCTGGTTCAACTGCTCGTCTGACATTAAATTTTTCTGTTAAGAAAAATTTGAAGTTGCAGAACATGGTTTCTTTTCTTCCAGGAAACTTTAAATGTCTCTCCTTTTTAAT EMBV3_10171 TGAGCTAATAATTCACACAGAGCCAGAAGGCGGATCCCAGATACCTGCCCCAAAGAACAG Gene BVT0102_158512 + 0 NULL GK000019.2:22859359-22923515 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092743 TCONS_00095749 2 XLOC_056967 XLOC_057786 Coding TCONS_00092743 XLOC_056967 NonCoding Coding - 19:22893188-22902790 - TSS69715 967 1 TCONS_00092743_1 99 0.233712512926577 2 0.899489636496198 0.00270345808780224 0.000323620046363708 0.00117259839102031 0.000191085791056546 0.000546613878405738 1.49666929353921e-08 0.000829972641633637 0.000697288438765157 0.000254954898749667 0 0 0 1.12897140265219e-12 0 1.15696262005495e-05 0 0 0 0.00775921948948057 0.00569381419109151 0.000187408483749498 0 0 0 0.00368994213123023 0.000870446705569317 0.00178255059707221 0 0 0 0 noncoding GATCTTCATCAGGGTCGCCCCTGACAACCCGTGGTGAGGGAGAGAGGGGACCCGCCTCCTTCTAGACGCCAGCAGGGCCAGGCCCAAGCCAAGACCCCTCGGTTCCTGGCCAGGAGGCAGCTACTCATTTTACCAATGAGTCAACTAAGGCCTAGAGAGATGAAGGAAGCTGCCAAGGTCACTGAGCTAATAATTCACACAGAGCCAGAAGGCAGATCCCAGATACCTGCCCCAAAGAACAGACTCGGAAGGAGTCTGCCCTTTATGTTTTGGCAGAAGAAGAGAATTCATCAGCCACTGGCCGGGCCACCTGGGGTATGTGACCAGGTTGGGGCCTGCTTGGTCAGCCCGGGTATCCATTGCCAGATTCATTTGGAGCTAATAAAACCTGTGGCTGCTGCCCATTTTCTGACTTGGTTTGAAACCAAAGACTGAATGTATTTATGTGGAGACTCTCTGCAGGCCCCTGGCCTTGGCCACGACACTGCCTCTCCTTCCTTCAGACAGAGCCTTGTCGCCTTCAGACACCCGTGGGGAGAAGGAACAGGCGTGGGTGTATTTTTCTGCAGAGGGGCCTCCTAGGCGCATTCTCCCACTGAGGCTGTGAATCTGGTTTACGGTTTGCATGCCCAAAATATTCTTTTGTAATTTTACTTTTATTTAATAATAGTTTATCATGAAAAAATAAAAATATAGAGCAAAGTTGAAAGAAGCTTGTGGTGTCCACCTGTGTGCCCACTGCTTTAGATTCTACTATTAATACTTTACTGCACTTGGTTCCCTTGTGCAGACCCCAGGTCAGCAGCATATCTGGCTGGTGGGTCTGTGAACACACTGTAAATTCTCCCTGAGGAGAACACACTGATAACGTACATAGTGGTAATAAGACAAAATGCCCCCCAGGTTAATGGGGGAGGTCGAGTGTGATGGATGACTCAACTCACTGTTAAAGCAAAACTATAACTAT TCONS_00092750 s 5' 0 TCONS_00092744 TCONS_00092745 TCONS_00092746 TCONS_00092747 TCONS_00092748 TCONS_00092749 TCONS_00092750 s 3' 8636 EMBV3_25891 GTTACTGTAGGGCCTGCGGCTTCCGCCCGTGCTCGCGGACCACCGCCACCGCCTTACCAT Gene GeneID:100313237|MIR2469:NR_031008:32_cdna Constitutive 0 NULL GeneID:100313237 8 GENE MIR2469 bta-mir-2469 microRNA mir-2469 EMBV3_01608 ACAGATATTTTACACTGGGTTTGCCAACAGGACTTCCCAGAAATCATCCTGAAAGCTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42861 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29176 CTTATCAGGGCAGAAGAAGCAGTCAAAGGCTCTGCCAGGGGGCATGGTCAAACCGATGAT Gene BVV0102_005220 + 0 NULL GK000020.2:70996379-71141670 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01938 CAAAGCCCTGTGGGTTTCTCCCTGAGTTGAGAGCCATCCCTGAGTTATTTACTTGCCACT Gene BVV0101_019926 - 1 EMBV3_05519 GK000012.2:24818620-24828340 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21475 ATAACAAGAAGGTTGAGAGAAGTCCTTTGCCGCCCAACACTCATGGCTGCATCGCCCTCT Gene BVT0102_024737 - 0 NULL GK000019.2:54262307-54312023 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094525 TCONS_00094527 TCONS_00094528 TCONS_00094526 1 XLOC_057473 NonCoding TCONS_00094525 XLOC_057473 NonCoding NonCoding - 19:54276377-54282933 - TSS70684 997 3 TCONS_00094525_1 56 0.0381143430290873 3 0.84836003051106 3.71861405008848e-08 5.7685229892281e-09 0.000141989334198855 4.7111497962794e-09 0.00027507579542902 1.24192029045689e-11 5.6646130121641e-47 9.64018845528038e-05 1.14625481954594e-10 2.41375424628186e-09 0 0 0 0 0 0 0 0 0.000824204853959511 8.29426419867137e-09 0.000101366975086454 0 0 0 0 8.15389750710871e-09 4.70121134086007e-05 0 0 0 XR_228788.1 LOC101901951 PREDICTED: Bos taurus uncharacterized LOC101901951 (LOC101901951), 0.0 1373 100.00 0.762286860581745 0 noncoding 0 0 0 0 0.0460818909548043 0.660469971860232 -0.0221654080370153 0.648097404487556 CCCGCCCCGAGGTGCAGGGACACGGACTGAGGTCGAAAGCCAGCAGCAGAGAGGCCCTCTGCCCCCATCCTGGTGCCCCAGCCCAGCCCAGGCCAGGTCCAGTCACAGCTGTCCTCTCCTGGGGCAGGCTTATTGAGAAATCCCCATAACAAGAAGGTTGAGAGAAGTCCTTTGCCGCCCAACACTCATGGCTGCATCGCCCTCTCTGAGGTCTCCCAGTTGGGTTAGCTCCTGGCCGGCTGCCCTTGTGCTGCCCCCACGTTGCTGCGTGAATCATTAGATGCTGGGAGGCGTTTCATTCTCAATCCATCCACCAGTTTTTCTCTGTTCTGAGTGATCTGTGATGAGCCTGCATGGACAAGTCTCGGTGTGGACAAGTGGTCCCATTTAAACCTCTTGTCAACTCAGGACCAGGACCCTCCTTGGAGTTGGATGTTTGCATAGTCAGGACCTATGGTGAGGTAATCACCAGGGTCCCCCAGGCAGCACATGGTAAAGGTGGGATCCGCATGCCGTTCTGGTGATCAGGACTCCCTCAAGTCAATCCTGGACTCAGCTGATAGGAAATCAGAGAGGAGACACTTGGAGATGATGCAAATATGCTATTTCTCATGAACCCTCCTTGTAGACTGACCACAAGAGAGTCCCAGCAGAAGACTCACCTCCAGGCTTCACCTGTCAAGCATTTCTACTTTCTGCTCTTCCCCAGGAATCTCACAAGGGCTGTGAACTCAGGAGGATGCCATCATTAAAAAAAAAAAAGAAAACAATGTTTGTCCTTTTGAGGGTTAACTTCTTAGAAGTTTTCCTGACATTGATACACATCCTGATGTAATACCCGGCAGAAAAGACCAGGTTCTGGCGCAGGCTGATTTGCTTGGATCATCTGAAGGTGACTGTGGTCCTTCATGATTGAAGCTCTTTGTATATTTGCTAAAAGCTATGGTTAAATTTCCCAGAATTTGCACACGTCATGTACTGATAACTTTCATACAAC TCONS_00094517 TCONS_00094518 TCONS_00094519 TCONS_00094520 TCONS_00094522 TCONS_00094523 TCONS_00094524 s 3' 12700 TCONS_00094517 TCONS_00094518 TCONS_00094519 TCONS_00094520 TCONS_00094522 TCONS_00094523 TCONS_00094524 s 3' 12700 EMBV3_10464 ACTATTCTGCGAATGAGGAATTCAGACCAGGTGGTATCCCGCTGCCTGGAGCTGGGGGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33403 AGGTCCGGCTGATGCGGAACAAATCCTCAGCACTCCCTCAACATCCTGGGCCAGAAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05230 CACAGTGGCTGCACCATCTCGAGTCTCTTGTCACATCTAATGAGCATCCTCCTCAACATC Gene GeneID:786299|LOC786299:XR_083971:8_cdna Constitutive 0 NULL GeneID:786299 19 PSEUDO LOC786299 NULL similar to UL16 binding protein 3 EMBV3_15047 GTTCGGGTGACGGTCCGGAGAGTTTCTGCCTCTGGAATACAACCATGAAGATGGACAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09752 CCTCAGCTGTATGTGAAGGGCGAGCTTGTCGGAGGACTGGACATCGTTAAGGAACTGAAA Gene GeneID:511528|GLRX3:NM_001035101:30_cdna Constitutive 2 NULL GeneID:511528 26 GENE GLRX3 TXNL2 glutaredoxin 3 EMBV3_37117 TCTTACTTTTTGGAAGGGCGACTGTGATTGCAGAACAGGATGTGAGAAATCACTGCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38502 CCAGCGTGTGGTGATGTCATGAAATTACAGGTGGAGGAAGCCTTGACCATCAAAAACACA Variant GeneID:514789|ISCU:NM_001075683:5_cdna 292^402 3 EMBV3_20081 GeneID:514789 17 GENE ISCU MGC140639 iron-sulfur cluster scaffold homolog (E. coli) EMBV3_40788 GATGTTGTCCATCGTTGGTATACAGCACACCGGACTCTAACCAGAGAGTTGAGGAGGCCT Gene GeneID:535630|TMLHE:NM_001076064:14_cdna Constitutive 1 NULL GeneID:535630 X GENE TMLHE NULL trimethyllysine hydroxylase, epsilon EMBV3_04126 CTATGGCTACGGGACCAAGAAAGACTATCAAACAGCAGCCACACATTATAGCATCGCGGC Gene GeneID:100139737|SEL1L2:XM_002692041:3_cdna Constitutive 0 NULL GeneID:100139737 13 GENE SEL1L2 NULL sel-1 suppressor of lin-12-like 2 (C. elegans) EMBV3_30359 ACTGAGTGTACAGAAAGGTAATTGCAGGCTATGAAGATACAGAAATGAACAATAGTGAGG Gene BVV0102_114560 + 1 EMBV3_05941 GK000005.2:82656453-82675279 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25558 ATCCACCTTCTTCTCCTACTGACGACAGGATCAAATCAAGATGGTGGGCTCACGAACCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21637 TGCCACAATCTTTCCTGTTGCCTGTGGAGTCTCTGCTGAAATGAATCAGGATTCGAGCTC Gene GeneID:784123|SRRM1:XM_002685707:388_cdna Constitutive 0 NULL GeneID:784123 2 GENE SRRM1 NULL serine/arginine repetitive matrix 1 EMBV3_17140 CACTACCAGTGCCCAGGTGGCCGGTCTGTATATGGGTTATCTCCCCTTCCATCCCTCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42828 ATTGAGATTGACATTGAACCCACGGACAAGGAATGATGAGAAGACAGCAGCTGATTACAA Variant GeneID:286796|NEDD8:NM_174764:50_cdna 51^133 1 EMBV3_43077 GeneID:286796 10 GENE NEDD8 NULL neural precursor cell expressed, developmentally down-regulated 8 EMBV3_23824 CTGCAGACTTGGGACAGGAGAGTCAGGCCTCGTCTTGGGTTGAGGCATGGAACTCCGCTT Gene BVV0102_047551 + 0 NULL GK000028.2:39789075-40732423 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00063810 TCONS_00162571 TCONS_00200854 TCONS_00142473 TCONS_00162568 TCONS_00162302 TCONS_00231771 TCONS_00218950 TCONS_00217533 TCONS_00168478 TCONS_00189709 TCONS_00186556 TCONS_00021875 TCONS_00168479 TCONS_00255144 TCONS_00178728 TCONS_00066112 TCONS_00131539 TCONS_00158397 TCONS_00066108 TCONS_00098199 TCONS_00131532 TCONS_00054137 TCONS_00147823 TCONS_00185577 TCONS_00032734 TCONS_00131535 TCONS_00149042 TCONS_00111145 TCONS_00054140 TCONS_00131533 TCONS_00168480 TCONS_00062418 TCONS_00231768 TCONS_00186557 TCONS_00233458 TCONS_00217532 TCONS_00107096 TCONS_00129560 TCONS_00054136 TCONS_00207145 TCONS_00238288 TCONS_00218944 TCONS_00186834 TCONS_00098203 TCONS_00011614 TCONS_00131531 TCONS_00230828 46 XLOC_090915 XLOC_038536 XLOC_099452 XLOC_122505 XLOC_086898 XLOC_099449 XLOC_099184 XLOC_141259 XLOC_132269 XLOC_131531 XLOC_103118 XLOC_115747 XLOC_112608 XLOC_012548 XLOC_158076 XLOC_108501 XLOC_040830 XLOC_080244 XLOC_096851 XLOC_040826 XLOC_058445 XLOC_080237 XLOC_031946 XLOC_089710 XLOC_111630 XLOC_018972 XLOC_080240 XLOC_090919 XLOC_067045 XLOC_031949 XLOC_080238 XLOC_037293 XLOC_141256 XLOC_112609 XLOC_142940 XLOC_063007 XLOC_078273 XLOC_031945 XLOC_125663 XLOC_144955 XLOC_132263 XLOC_112885 XLOC_058449 XLOC_007165 XLOC_080236 XLOC_140318 Coding TCONS_00186557 XLOC_112609 NonCoding NonCoding - 4:28981025-28981694 - TSS138925 669 2 TCONS_00186557_2 107 1 0 5.04003842825042e-05 1.65220881881981e-05 2.6347800294678e-05 7.67128918004173e-05 8.04618190590629e-05 6.67340001743376e-05 5.02366887481601e-05 3.23543833301851e-05 0.000114776353102677 0.000100904156947909 2.52179144529941e-05 5.85168111144673e-05 9.65431640714993e-05 0.000139283126129092 0.000217891737511642 0.000570913133593805 0.000109102723715775 0.000139862620326037 5.3594374410669e-06 0.000294426402091814 6.63550157869369e-06 4.15164045014223e-05 9.51539900942328e-05 5.25334629035089e-05 1.81238148793375e-05 3.33537756756119e-05 2.66257992959201e-05 1.82949026561345e-05 0.000135697002898516 9.73582836758597e-06 XM_002698950.2 FRMPD2 PREDICTED: Bos taurus FERM and PDZ domain containing 2 (FRMPD2), 3e-11 73.4 78.32 0.212257100149477 0 noncoding 1 0 1 1 -0.00615637206504964 0.968424672851612 -1.02613056179786 0.00497382998682155 CAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGCTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAACACGAAGGGGCAGTTTTTCCGTGCATCGTTCGGAAAAAACCCCAGGTTCCAAATACAGCTCGACAAGCGGCCTCTCTCCCCGGGGACATCTCGAGAGGCAAGCGGAGTTCCATGCCTCAACCCAAGACGAGGCCTGACTCTCCTGTCCCCAGTCTGCAGGGACCCTGCGATCGGAGTCTGAAATCAGAGGTACCCTGCGGTTCCTGCCTCAACTGGAGATGAGGCCCTCTTCCAATGCACCAAGCCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGGCTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGCCCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAATGATGCGCTCCCCCTCGCCACTCGCA TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 EMBV3_21682 CCGGCCGGACTACACGGCGCAGAACCTGGACCAAGGGTGCCAGACAGGGCACCCCTTTGG Variant GeneID:618357|MRPS34:NM_001035500:294_cdna 356^706 1 EMBV3_05536 GeneID:618357 25 GENE MRPS34 MGC127369 mitochondrial ribosomal protein S34 EMBV3_11204 ATCATCAACATCAGTAGCATCATAGGCAAGACACGGGATCCGCTGTAACAGTGTCCTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28396 TTTGGGAGTTGGCTGTGCAGAGATCGTGCCTGGGTCTACTAGAATAGGCTGAGTCATCTT Gene BVV0102_018031 + 0 NULL GK000012.2:14144924-14664055 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034575 TCONS_00034573 TCONS_00034578 TCONS_00034574 1 XLOC_020709 Coding TCONS_00034575 XLOC_020709 Coding Coding LACC1 12:14135014-14148914 j TSS25516 4730 1 TCONS_00034575_4 426 0.175052854122622 7 0.660191380674869 0.000783730506190808 6.07989396176452e-05 0.000590420444753671 0.000913086358100352 0.00147723898260393 0.00052719168921981 0.000472648295907193 0.00203807848228835 0.00190519045309037 0.000155918782548295 3.44212603730783e-09 2.74529049828223e-09 0.000258361454830408 2.47446186949051e-05 0.000157774864855113 0.000263159943919241 6.11988144148511e-05 3.25386090172917e-46 0.00200171338343517 0.00376170873829689 0.000431821838968644 0.000120287218437732 0.000101805315531134 0.000135210442024687 0.00152519269269285 0.00143308180123498 0.000708200757539505 1.08179904532674e-06 8.13591617456435e-05 1.3409347499569e-05 XM_005213663.1 LACC1 PREDICTED: Bos taurus laccase (multicopper oxidoreductase) domain containing 1 (LACC1), transcript variant X1, mRNA. 0.0 8531 100.00 0.999788583509514 XM_005266261.1 LACC1 PREDICTED: Homo sapiens laccase (multicopper oxidoreductase) domain containing 1 (LACC1), transcript variant X1, mRNA. 0.0 2526 81.84 0.536363636363636 TCONS_00034575_4 sp|Q8IV20|LACC1_HUMAN LACC1_HUMAN Laccase domain-containing protein 1; 0.0 753 85.12 0.997652582159624 1 coding 0 0 1 1 -0.207842343775248 0.307109964195678 -0.00485177817760371 0.945928377743131 GGGCGGGGGTTAGGAGGGGCAGAGGCTGACACCGGAGGGGTCACCAGAGACAGAGCGGCAGCCCGGAGGGGCCGGCAGGGGCTGGGGTGAATTTTGGGGGACACACAAACTTCATTCAAGAACTTTGTACAGAATTGAAGGATGGCAGAAGCAGTGTTGATTGATCTCTTTGGTTTGAAACTGAACTCTCAGAAAAACTGTCATCAGACATTATTAAAGATATTGAATGCAGTCCGATATCACCATGGTGCCAAGGCCAAGTTCTTTTGCATAATGTGTTGTAGTAACATCAGCTGTGACCATGATAACTGTGAATTAGAAACAGGCAATGGATTATCAGCTCTCTTGAGAGAATTTGAGATTGTTAGCAATCCCAGCATGGCTGCCTCTTTGTATACAATTAAACAAAAAGTTGATGAAAGGAATTTGAGTTGCATTAAGGTAATTGTGCCTGTGCACCGGAAGACATTAATGAAGGCTTTCATTGATCGACTCTTTACTGATGTTTACAATTTTGAGTTTGAAGATCTACAGATGACTTTGAAGGGAGGTCTTTTGAAACAGTCTACTGAAGTAAACATAATCACATCTCAAGAACTAGAAGCAATCCAGAATGAAATAGAAACATATTTGAGAAGTTTGCCGGCACTGAAGGGAGAATTAACCATTATCACATCTCCTTTGATCCCAGATACTTTCATACATGGATTTACTACAAGAACAGGTGGGATATCTTACATACCAACTCTTAGCTCATTCAATCTCTTCAGTAGTTCCAAACGGAGAGATCCCAAGGCTGTTGTTCAAGAAAATCTGCGTAGGTTGGGGAAGGCTGCAGGATTTAATGTGAATAAATTTTACCAAATAAAGACTGATCATGCCAATGATGTCTGGATTATGGGAAGGAAGGAGCCTGAATCTTATGATGGAATCACCACAAATGAAAGAGGAGTCACAATAGCAGCTCTTGGTGCTGACTGTATTCCGATAGTTTTTGCAGATCCTGTCAAAAAAGCATGTGGGGTTGCTCACTCTGGTTGGAGAGGTACCATGTTAGGTGTTGCTATGGCTACAGTGAACGCTATGAGAGCAGAATATGGCTGCAGTTTGGAAGACATTATTGTTGTATTGGGGCCTTCAGTCGGACCGTGCTGTTTTACTCTTCCAAGGGAATCAGCAAAGGCATTTCATAATCTTGATCCCGGATGTGTACGGCTGTTGGACTCACCAAATCCCTATGTTGACATCCGTAAAGCCACTAGGATTCTTCTAGAACGGGGAGGAATTCTACCACAGAATATTCAGGACCAGAACCAGGATCTCAACCTCTGTACATCTTGTCATCCTGACAAGTATTTTTCCCATGTCCGAGATGGCCCTAACTTTGGTACACAGGTTGGCTTCATCTCAGTTAGAGAATGAGATACTTGACTGGATTTTTGCATAACTATTTCCTGCTTCCTTCCAAACCAACTGTAAGAAAGCAATGTAGCTGTTTGATATACTTAAAACCAAAAGGATTACAATGAATAATTCAACTTTCATATATACTTTCATTATTATCCAAAGCCAAATGATTTATTGATTTTAACAATAACTGACACAAAATCAATATGATATAGTTTGTATGTTATACAGATAAGAATTATTCTTAAAGTTTGTGCTCTGTATTTGTTACATACATCAGGAATAAGTCTATTCAGTTTAGTATTTATTGGGTAGCCTCTATTTGTCAAGCATTCCATGAATCATAGATGAAATCAAGATGAGTAATACTTTTTCCCTTTGAGTCTAATGTAGTGAAAGAGATAAACACTTCTAACACTTAAGTTTAATTTTAACAGCAGAAGAGTACAGGAGAAGGAGGATTAATTCTATCTGGAACGCAGACTGGTGAAGGTATTGCAGAGAAAATGACTTGTCACATGGATCTGAAAGACATACAGACTTTTGACAAAAAAAGAACAACCATAACAGGTTAAGGGAATACCATAAACTGGGGCATGAAACTGAAAGTGTTCTAGAAAGAGGAGGGTGTGGGTAGGAGTTACTGGAAAAACAGGTTAGAAACAAATTAGGGTCTTGACTGCTATGTCAAAGAATTTTGGAGTTTATTTTCCAGGCAAAGAGTAGGCATAGAAAGTAGGAGAGTGTTTTTATGTCCTTGGCATTATATTAACATGATGGATTTGTGAGAGACTAAAGCAGAGAGATTAGTTAAGAAACAATCAGAATACTTTAAAAAAGAAATAATGAAGCCCGAATGCAGTGGAAATTAAAATTGAGAGTAAATGAAATAGTATGACATTTCAGAGACGGAATCTGCAGATCCTGTTCCTAGAGCATGGAGGTGAGAGGTGAGGACCAGTGGGGAAATCCCTGATAACTCTCCAGTCTCTGCTTGATGACTATCTGGAGGGGCAGCCAAGATGGGGAAGAGGTTTGGGACACGGGAGGAATAATGAATTTGACACATAGACTGAAGGGCTTCCAGATGGAAATATGTGATCAACAATTAGATATAGAGACCTGGAACCTGGGAAGGAGCCATGAAGAAAGAGAGATTTGGGAGTTGGCTGTGCAGAGATCGTGCCTGGGTCTACTAGAATAGGCTGAGTCATCTTCACAGAAACACAGAGTGAGAAAAAAGGAGGTCCAAGGATGAAACCTTACACACCTGCATTTGAAGAGCCAGAAACTGAACCAGTAAAAAAGATTAATCTAGAAAAAATATATATACAGTCATTTTGGGGAGAGAAGCCAGCATAAATATGAGAAGTACTCAAAAAGAAATCTTCAGGGAGTTCCTGGTGGCATAGTGGTTAGGATTTGGTGTTTCCACCGTGGAGGCCTGAATTTGATCCCTGGCCAGGGGTGGGAGGGATCATCCTGCATGCCGCTGGTTGCAGCCAAAACACAAAAATAAATAAGAAGCTAGTAGATTACTGTGTTGAGGCTGTTCTATGGGTCATTGTGGTGATGGATTTCAGTGCTTTGAGGAAGAGGATGCACCAGTGTCAACACTACTTTGCTAGTATTTATTGAAGTAAGTGAAGTTGCTCAGGTGTGTCTGACTTTTCGACCCCATGGACTGTAGCCCAGCAGGCTCCTCTGCCCATGAGATTTTCCAGGCAAGAATACTGGAGTGAGTTGCCATTTCCTTCTCCAGGAGATCTTCCCGACCCAGGGATTGAACCCGAGTCTCCCGCATTGTAGGCAGATGTTTTACCATCTGAGCTACCAGGGAAGTCCAGAGGATGTAAAACACTGGGGGCTGTATTTTGACACAAGGGGTGTATATGTATACTGTGTGTGTGGAGGGGCGGGGGTGAGTAGTTTTAAGCATATGTGTAGGCTGAAGAGAAAAGTTAAGGTGTTTTCACTTGGGGAAATGGTATGGTACCTATTTTTACCATGAATTTTGTCACAGTGAACCTTAAAAGGATTTCTTATTTCGTACATGTATTTCTTACCTTAATATGCAGAAAATTACGTTTGTTTGGTACTTCTCATCCATTACCTCATTTTACCCTACAGGTACTCTAAAGTACATAAGTCAGGTGCTATTCCTTTTGTTCAGATGACCCTCGATGAGTTAGAGACTGAAATCACATAAATTGTGATAAAGTAAGATTTGAACCTATATGTCTTGTGACCCCATATCTCATTTCAGATTTTACAGTTAATCAAAGCTATCTAAATTAAAATTTTACAACTTTTTGTTAATGTCAGTATTCTTATACTCAGTCAAAATTTTGTTGAGGTGCTAGGGTAGATTAAAAAATACAGTTGTAGCCCATGTTTTTTTAATATCCAGTGAAAGGTGACAATCAATACAACAATTTCAATACTGTGATATGTGTTGTATGGTTGTGACAACCTGATACCTTGTTTGTTTAATTCTTTTATGAAACTCATGAGAAATTTATATAAAATATCTCATTTCAAAGTAAGAAAGACAAGATAAATGTCGGGTACTAACACATATATCTGGAGAAGGAAATGGCAGTCCACTCCAGTGCTATTGCCTGGAAAATCCCATGGACAGAGGAGCTTGGTAGGCTACAGTCCATGGGATCGCAAAGAGGTGGACACGACTGAACGACTTCACTTTGACTTTCAACGCATATATATGGAATCTAGAGAGATGGTACTGATGAAATTATTTGCAGGGCAGCAGTGGAGAAACAGACATAAAGAACAGACTTATGGACAGATTGGGGGAGGAAGGAGAGGGTGAGATGTATGGAGAGAGTAACATGGAAACTTACATTACCATATGTAAAATAGATAGCCAATGGGGATTTTCTGTATGTCTCAGGAAACTCAAACAGGGGCTCTGTAACAACCTAGAGGGGTGGGCTGGGGAGGGAGATGGGAAGAAGGTTCAAGACGGAGGGAACATATGTATACCTCTGGTTAATTCATGTTGATATTTGGCAGAAAACATTTTGTAAAACAATTATACTTCAGTTAAAAAATAAATACATTTTAAAAAATACCTCATGTCTTCCAATTCAGGGAAGGCATTAAATACAAATTATAAGAGCAATTTCAAACTCATGCAAAATACTCTCTTGTTTCACGATAATAAGATTAAAGAATAATTCCACTGAGAAAAATGAGTAATTTTCCAATTTGTCGCTCTATATTAATCTGTTGAATGCAGAGTATTAGGTAGCCATGTTTTACTTTATGTACCAAAATATTCCAAAGCCAAATAAAAAATT EMBV3_27585 TACAAACAATCTTGTTTCTTTGTACCTAAAACTATGTTAAGGTCAAGAAGAGTAGGCGAG Gene GeneID:514334|ZPBP2:NM_001075661:130_cdna Constitutive 3 NULL GeneID:514334 19 GENE ZPBP2 NULL zona pellucida binding protein 2 EMBV3_42160 CAAAGACGTCAACGCGGCCATCGCCACCATCAAGACCAAGCGCACCATCCAGTTTGTGGA Gene GeneID:534900|TUBA3E:NM_001038163:85_cdna Constitutive 0 NULL GeneID:534900 17 GENE TUBA3E MGC133894 TUBA3 TUBA3D tubulin, alpha 3e EMBV3_28466 AGAGCTCAGGGGCTGCAAGGCAGCTCTACTTAGGGGAACAGTCAGCAGGCCCAAGAGTGT Gene BVT0102_152350 - 0 NULL GK000030.2:40302040-40310749 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29245 GAGAAATGTGCCCTCATACAACCAGGACTTGGGGCAGGATGGACCAGAAGAGGATTTTAC Gene GeneID:509501|SRGN:NM_001025326:290_cdna Constitutive 0 NULL GeneID:509501 28 GENE SRGN NULL serglycin EMBV3_01829 ATAGACATGGATGCTGTCCACCCCTCCCACCACCTTTCCTTCAAGTACCCGTTCAGTTCT Gene GeneID:539210|PLAG1:XM_002692655:81_cdna Constitutive 0 NULL GeneID:539210 14 GENE PLAG1 NULL pleiomorphic adenoma gene 1 EMBV3_29491 AAGAGACAGGAAGAACATTCTCTCCGAGGACAATCTGGACAGGAAGGATGGGGCTTGCAA Gene BVV0102_089607 + 0 NULL GK000018.2:34350508-34367978 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085975 TCONS_00085976 TCONS_00085981 TCONS_00085977 TCONS_00085980 TCONS_00085973 TCONS_00085972 TCONS_00085979 TCONS_00085974 TCONS_00085971 TCONS_00085978 1 XLOC_052009 Coding TCONS_00085981 XLOC_052009 Coding Coding TK2 18:34366714-34393113 = TSS64075 2517 1 TCONS_00085981_4 233 0.0496622963845848 10 0.905030684142738 0.0036199225265309 0.00276217421727097 0.0032493480753203 0.00256977542023523 0.00349636660378276 0.00105606245668836 0.00354649638498633 0.00395965089137153 0.00328044166316 0.000458211445295656 0.00044326501413062 0.000115888177894906 0.000306546580758092 0.00152446558215211 0.000289470459572822 0.00182406722654642 0.000558301889682936 0.000625519909584508 0.00679927557251909 0.00533684625493178 0.00178632830832436 0.00112332852195582 0.000377796933116306 0.000299735432523637 0.00191227622457237 0.00204338488861692 0.00144867613787604 0.000436925565732917 9.86383437456303e-05 0.000804916389298627 XM_867267.5 TK2 PREDICTED: Bos taurus thymidine kinase 2, mitochondrial (TK2), 0.0 4540 100.00 0.999602701628923 NM_001172643.1 TK2 Homo sapiens thymidine kinase 2, mitochondrial (TK2), transcript 0.0 1301 74.62 0.823202224870878 TCONS_00085981_4 sp|Q9R088|KITM_MOUSE KITM_MOUSE Thymidine kinase 2, mitochondrial; 4e-143 406 84.58 0.969957081545064 2 coding 0 0 1 1 -3.2492793388552 0.0178869804594836 0.0123747161696839 0.820411029824143 ATGGGTTCATTCTGCCAGCCTCTGTTTGATAGAGAAAATGAAAAAGAGAAAAAATCAGTGGTCTGTGTGGAGGGCAACATTGCCAGTGGGAAGACAACATGCCTGGAGTTCTTCTCCAACTCAACAGACATCGAGGTGTTAACAGAGCCTGTGCCCAAGTGGAGAAATGTCCGAGGCCATAATCCGCTGGGTCTGATGTACCAGGATGCCTGTCGATGGGGCTTCACGCTGCAGACGTACGTGCAGCTCACCATGCTCGACCAGCACACTCGTCCGCAGACGTTGCCTGTACGGTTGATGGAGCGGTCAATTTACAGTGCAAGATACGTTTTTGTAGAAAACTTGTACAGAAGTGGGAAAATGCCCAAAGTGGACTATGTGGTCCTGTCGGAATGGTTTGACTGGATTGTGAGGAACATCGACGTGTCCATCGACTTGATAGTTTATCTCCGGACCACTCCTGAGACCTGTTACCAGAGGCTGAAGATGAGATGCAGGGAGGAGGAGAAGGTCATCCCACTGGAGTACCTGGATGCTATTCACCACCTGTACGAGGAGTGGCTCATCAAAGGGAGCCTTTTCCCCGTGGCAGCCCCTGTTCTGGTGATCGAGGCCGACCACAACATGCAGAAAATGTTAGAACTCTTTGAACAAAACCGGCACCGAATCCTAACTCTGGAGAATCGGAAGCTTGGTCCATAGGATAGGAAAGATCATGCCCGAGAAATGCCTGCTGCTGCCAAGCTAGCTTTTAGGAGCAGTTTGGAAAGCTCCACTCTCAGGAGGGCTTTGTGTCTGCCCACAGTTGTCTTCCTTCTGGCCTTCTCTCCTTTCCCAGTGTCTTCATCCTGGGATCCTGGGCCTCGTGGGTAAATGGGACCAGTGGGTTTGCCATGCCCTCTGGTGGCACAGCCTTGCGTTCCCCTGGTGCTTCTTCTGGTGGTTTCCCACCGCTGGGTCCTTCTAAGCTAGGGAAGTTCCACCTGACTTGTGCTGGGCTCATGGTCTCTAGCCCTTCAGGTCATCCAGGAGGGCGAGGTAATGGTCTTCCATCCCAGGGGAGGAAGTTGAAGCTCACACAGACTAAGAGACTCTCTGGGGTCACACGGCCAGTGACAGTGGAGTCAGCACCATTCAGACTTCTGGGGACTCCCAGCCCATCTCTTGCCCCAGGCTGCCTCATCCCAGAGCCCCGCCTTGCCTTCTGGAGACCCTCAGACGTGCATGGGGAGGGCCAACTGTGTGTGCAGCTGGCATCATCACTTTCTCATGGTTTGAGCCGTCCTTGAGGGCAGTTGGCATTTGACTTTCACAAAATTGTGCCACGTTTGGCTTGAGCCCAGCGTTCATCCGTTCTCTAGCGTGAGGCTAATATGGTACTTAACACCTCATCAGGACTTCCCCGACTTAGGAGAGCTATGCACTGGCTCCTGAATGGTGCTCGGTCTCCTTGGTGACAGAGGTCATGCCTGAGCAGCTGCTGATGACCTGTCGGGGCAGTGGCTTGTGGCCCCCCAGGCTGGTGTGCCCAGTGCCACGCTGGGGCAAGGGGCTGCCAGCCTGGCTTCTGAGGCTCCCTCCCTCCTTAGTGGCTTGCATGATGAGCTTTATCCTTGGAGTTCCTCAGAGTTTGTGGCCCAGGGGAGAGACACCAGTGGCCTTAAGTCTTTTTGAAATGTTTTTCCATCCAAGGGGACACTGCGGGCCACAGAGCGTGAACTATCTTTATTAGCTCAGAGACTGTCTTAGCTGTGTTCAGCTGTAACAGTGCATCAAAGGCACAGCTGTCTCCTGAGTCAAGTAGCAGCAAGAGACAGGAAGAACATTCTCTCCGAGGACAATCTGGACAGGAAGGATGGGGCTTGCAAGCAAAGGCTCTTGGAGTACTGGAGCTCCTGAACTTCGGAGGTGGGTGGAGAGAGCTTCCAGAAGGCTGAGTGCGGACGTGGGGGTACGGATTGATTATGAACTTGGGGGAACAGGCCTCAGCCTCTCCCGAGTGGCGGTCGGTGTGCCTGAAGGTTGGAAGGCCTCGTCTCAGCCTCCGTGTGAGTGAGGCACCGGTGCACGCAACTTGCTGATGGAAATTGGTGACAGGTGGCCCCGGCCCAGAGGCAGCACCCGGAGGGCAACCGGGCTCAGAGGCAGCGCCTGGAGGGCAACCGGGCCCAGAGGCAGCGCCCAGAGGGCAACCGGGCCCAGAGGCAGCGCCCGGAGGGCAACCGGGCTCAGAGGCAGCGCCCAGAGGGCAACCGGGCCCAGAGGCAGCGCCTGGAGGGCAGCACTCTGGCTCCTGGCCCTTCCTGGAGGGACTGATCCTGGGCCAGTTGCACAGGCGGGGATGTGTCTCAGCCTAGACGCCAGTGATGGACCAGCAGGAAGCGCAACCGCTGCTACCAGGCACCTGGACATGCTGGGACCAGCTTTGGGACTTTGCAGACAGATGGTCCAGTTTTCCCCACAGCTCAATTTGAGAATCTGTACTGGGGGGAAATGTGATTAAAAAAACCCCAAAAA EMBV3_25701 ATATTGGGGCTTCCCTCGTAGCTCAGATGGTAAAGAATCTGCTGCAGTGTGGGAGACTTG Gene BVT0101_029131 + 0 NULL GK000008.2:25030664-25129177 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00230357 1 XLOC_139847 NonCoding TCONS_00230357 XLOC_139847 NonCoding NonCoding - 8:25037814-25039127 - TSS171861 1313 4 TCONS_00230357_4 49 0.633663366336634 1 0 1.03623079336881e-05 0 0 0 0 0.00031738538991464 0 0 0 0 0 0 0 0 0 0.000201154294632313 0.00740969503909401 0.00313875344519451 0 0 0 0.00140162034501641 4.36693305088558e-05 2.55363859135834e-05 0 0 0 4.38926478807262e-05 0 0.000137370773125365 XR_229125.1 LOC101906900 PREDICTED: Bos taurus uncharacterized LOC101906900 (LOC101906900), 1e-57 228 84.75 0.166031987814166 0 noncoding 0 0 0 0 -0.383572535368462 0.0355051472717425 -0.0354906448529301 0.528763224913653 GGGTTAGGGTTGTGGGGTGTGGAGGGCAAGATGCTAGCCGAAGTAACTTTAGAAATGAGTACAGTCTTTAAAAGCAACAGGAACTGCAAACAGGCACTCTAGCTGATAAAAACGGTTTCACACAGGGCTATGAGTTAACAGTTCTGATACTGTTATGCATGTATACTGGTACTGAACAATTACTGGTACTGAACAATAAATGGATGACAGATGGTGGGAGCCACATTTTTTCACTAAGTAGAAATTTACAGAGAGACAAGGGGGGAAGTATCCATGTAATAATGGACTAAAGTTGGAGCTCACTATGAACTCATTTAGTTTAATATAAATACAGATTGTGACATATAGGTAGAGTTACAGACATAGGTATATAATAGGTTAATATACACAAGTGTATTTCCTTGCTCAATCAACTAAGAAGACCTAGAAGTAAGGACACCCCACGGCAATCGGCATACCTAGCACCTAGATCTTGATTTTTAACGCTATTTTCCAATAGAAGGAGCCAAGGCTTCTTGAAGAAATGATTATAGGATTGGAACAGGAAATACAGGTATCCCTTGCTTTTCAAAAGTTTGCTTTATGCCACTTCACTTTTACAAAAGACCTATATAAGCACCTGGTTTTTGCTAATCCAAAGGAAATCTGAAAAAAACACACACACACACTTTTATGGAAAGAGGTGAAAAGCAAAAATAGGATGGCATTTGTTTTGCAGCAAGCAGTTTTAAAGGCAGCAAGCCCCAAGCAGAGGAGGGAGAAAAGCCTAAACAAACTCCCTCCCCAGTAACTACACTCAGCATATCAGCATCAAGCTGACGTAGCTTTGAACTGTGTCTAAAAGCATCTGTGCTTCATCTAAATTTATTGTGCACAACCGTTAGCAAGATGTGTCCTAAGGTAACTGTTTGTTTTACACCGTACTGGTTTATGAAAGGTTTCATAGGAACACTCTACTTTCATAAAGCAGAGGAAACCTCTACACAGAATGAGCCTGCACAGACTTAGAAAATAAACTTACGGTTACCAAAGGTGGTAGAGGGGGTGGAGGGATACATTAGGAGTTTGGAAGTAGCACATATACACTGAATTCAAGTGAAATGAAGTGTTAGTCACTCAGTTGTGTCTGGTTCTTTGCAACCCCATGGACTGTAACTCACCAGGGCTCCTCTGTCCATGGAATTCTTTAGGCAAGAATATTGGAGTGGGTAGCCATTCCCTTCTCCAGGGGCTATTCCTGACCCAGGGATCAAACACAAGTCTCCCACACTGCAGCAGATTCTTTACCATCTGAGCTACGAGGGAAGCCCCAA TCONS_00227159 . 3' 6578 TCONS_00227159 . 3' 7890 EMBV3_00281 GGAGTCATCACAGCAGCCATAAAAAGCGAAAGAATAAAAACCGGCACAGCCCGTCTGGCA Gene GeneID:540599|MEAF6:NM_001024572:280_cdna UTR3_Alt 3 NULL GeneID:540599 3 GENE MEAF6 C1orf149 C3H1orf149 FLJ11730 MYST/Esa1-associated factor 6 EMBV3_43363 GGCTCAGCCCCTTCTCAAGCTGCTTAGTTTCTAGAAAAGGGAGACAATTAGATAAGCCAA Gene BVT0102_263877 - 1 EMBV3_38682 GK000020.2:14459921-14682225 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41193 GGGTTCTGGGTGAAATAAGTTTGGGAAATGCTGTGCCCTTGACCACTGTTTGTAGGCTTC Gene GeneID:617444|MGC140681:NM_001078077:7_cdna Constitutive 1 NULL GeneID:617444 25 GENE MGC140681 NULL hypothetical protein LOC617444 EMBV3_25825 CCCTACTCCACTTCATTATACATCCCATTAGATGAACTAGAGGCTTCTAACTTGAGGGCC Gene BVV0102_059833 + 0 NULL GK000007.2:65112637-65631968 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38889 ATTTGCCCTGATTCTTCCCTATTTGGAGGTTGGCAGGATGGAGAATACTGGTTTGGGGGG Gene BVT0102_005194 + 0 NULL GK000004.2:96016760-96032590 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184964 TCONS_00184966 1 XLOC_111467 Coding TCONS_00184966 XLOC_111467 Coding Coding PODXL 4:96028969-96078516 j TSS137607 5787 1 TCONS_00184966_1 509 0.0492483151892172 8 0.883360917127518 0.00466581104435496 0.00443062637312261 0.00390208916729542 0.00247225253192908 0.00170790995846468 0.000984572028164456 0.00170144686081223 0.00181098852324871 0.0016382647091083 0.000387096270010681 0.000526764882239187 0.000233999777674771 0.000156666883895174 0.000612567531087258 0.00101048611948192 0.00187571716380217 0.00349533520858958 0.000563682092459083 0.00363993474146006 0.0040029534724917 0.00144930474502567 0.00309100488466639 0.000351025066286674 0.00105996620497847 0.00416943595268547 0.00333997716257087 0.00291211652427055 0.000355218165973014 0.000435098847643493 0.000343670412713844 XM_002686960.3 PODXL PREDICTED: Bos taurus podocalyxin-like (PODXL), mRNA. 0.0 1.023e+04 100.00 0.980127872818386 NM_001018111.2 PODXL Homo sapiens podocalyxin-like (PODXL), transcript variant 1, mRNA. 0.0 955 67.81 0.512873682391567 TCONS_00184966_1 sp|O00592|PODXL_HUMAN PODXL_HUMAN Podocalyxin; 1e-106 333 48.72 0.783889980353635 1 coding 0 0 0 0 0.143541479946788 0.75385996444958 -0.130529355276831 0.101708542420772 CTCGGCTCATTGTTCTCCGCCCAGCGCCGCCCCGCCCGCGCGCTCCTGGGGAAGGGGAGGGGAGGGGGCGGGGGCCGGCGCGGACGGGACCGGAGTCGCCGCAGCCGCCGGCCGGGCCGCAGCCGCGCAGACACCGCCCGCGACGCAGCTGCCTGCCGCTCCTCTGCCGCCTGGCTCGGCGCCTCGGCTGGCTCTGCCGCAGCGGCCGCGAGGAGGGGCCACCGGAGCGCGACTCGGGACGCTCGGGCCACCGCCCGGCCGTCGGAGCCACAGCCAGGCCTCCCGGAGAGGCGTCCAGACGCTCCCGCCGCCCGGACCCTTGGCCAAGTCCGCAGCCACCTGCTCCGCGCCCGCGCCTAGGACACGATGCGCTCCGCGCTGTTGCTCTCGGCGTTTTTGCTGCCGCTGCCGCTGGTGCTCTCCGGTAATGGGACAACCGAGGAACAAAGCTCAACTGTCACGAGCACAAAGCAGTCGGTAACATCCACAACCGCCAGTGATCAGACATTGAATTCAACCCCAGGCAAACAAAATGCAGCCCCGACATCCACTGAGACATCCACTGTGACCGCAGCACCGGCCAGCATTGTGGCGTCAACCTCAGCCCAGAAAAGCCCAACTGCCACAGGCAGTGAAGCCACTCTTGTAACTACTGAAGATCCTACAACCACATCAACCACAGTCTCAACCAGTCCTGAAAGCACGAGCAGCCGGAATGCAATGAATGATTCACCCACATCCAGAATCCCAACTACCCACAGTGTGACCACAGACAGCGTGACTGCTAAGGAAGGCAGTCAGAAAATCTCCACATCTCCAGATCCGAATATCACCCCAAACATCTCTCCTATTCTGTCCTCCTCGACCAACCTCTCAAGCACTCAGCAGCCTAGCCCCGGCCCTGTGACTTCGGCTCCTGGGACTTCAGAGCCCACAGGGAGTTTCCCTCAGGGATCAGACAAAATGACCGTAACTACAAGTTTAGGCAGGATGACAAGTCCCACCTTTACAGCTCAGGTGACCACACTGAAAACACAGGTCGCAGTTGAAGGAACTCAACACACCTCCAGTGAGACGCCAGCTGTCACTGTCGCCACTGGAGTTCAGCAACCTACAGGCTCTTCACGGGGACGTGGGACCACATCTCTTGTCAGGAGATCCACCATCTCCAGCACTCAGTTGACATCAAATGCCCCCCAAAGCTCCAGCACGCCTTCTCCCACCTCAGTAATTCTAACAAATATAGGGAAGATCCAGTGCCATCCTCCTGAAAAGCTGAATGAGAGCAAACTCTCCCTGAACATCTCGGACGCCAACAGCTGTAACGCAGTTGCTTCAAATCACAAACTGGTCGAGGTGTTGTGCCAAGCAGTAAAATCCTCCTTCAACAAAACTCAAGATGAGTGCCATATAGAGATGGCTCCTGGTTCACATGCCCAGGAAGTGGACATCAAACAAATTACTATCATCACAAAGCTCCAACCCACGGACATTTATAAGTTGCTGAAAAATGACTGGGACAAGCTAGAAGGCGTGGGAGTCAGAGACATGCAGTTTGGGGGTCAAGGACCACCAGAAGAGATGGAGGACCGGTTCAGCATGCCCCTGATCATCACTATTGTCTGCATGGCATCCTTCTTGCTCCTGGTGGCGGCCCTCTATGGCTGCTGCCACCAGCGCCTCTCCCATAGGAAGGACCAGCAACGACTAACAGAGGAGCTACAGACGGTGGAGAATGGTTACCACGACAATCCGACACTGGAAGTGATGGAGACCTCATCAGAGATGCAGGAGAAGAAGGTGGCGAACCTCAATGGGGAGCTGGGGGACAGCTGGATTGTGCCTCTGGACAACCTGACCAAAGATGACCCTGAAGAGGAAGACACACACCTCTAATCGGGGCTGCCGGCCATCTCCGACGGTGCAGAGCTCCAGCCCAACCACCTCAAGTGCCATTTGTAAGGGGAGGAGGAAGACCCTTCTTCCCCTTAGAGGGAAAGACTGGGGAAGAAGAGCAGACTTGGAGGGTCCCTTCATCCCAGTCCCCACAGGCCTTAATTTTTCCCTTTTCAAGCTGAACAAATCACATTCTGTGTAGAATCCTCTTGTAGAATAACCCACTAGTGCCTGAGTGCAGTGCTGCTGGGAGAACAGGGAAGAGCCATAGAAGGAACTCTTCGAGACCATCTACTAGCCTCCATTCACAGACAAGATGACTGAGGCCTAAAGAGGGTAAAGTCAAGGTCACACAGCCACTGGGTGACATGTCGGAATGAAAACAGAGACCCTTCATTCAGTCCAGTGCCCGTTCCCACCACACCACGCTGCTGGCATCACCCATGCCCTCCCTCCAGAGCTACCCCGGGCAGGGGTGGAAGCTGCCCATCAGTGGATGGGCTGGAGGGCAGAGCGGGGCTGGATCCTGCCTCCACGGGGTCTGGCTCCTTGAAAGGACAGGTCCCGTTCCTGTCTCGTCTGCCGGCCTTGTCTGCCTGCCTGTGTTCCTGTCCTTTGTTCTCCCTCCCTTCATTCAGTTTTTTCATCCCCACTCTGTTCCAGGGCCTCTGGGACTAACAGAGGTCATTCATGACCCTCAGGCCCTTGTTCTGGAGTCTAGTTTCCTGGCATCTGCTGGCACTGACAGAGCACACAAGACTCCCCCTGTGAACATGTCTGCCCACCAGCCATCTACAGATGAAGAGAGAAAGGGAAGCCCCTCTTTCCAGGATGGGTCCCCACATACCCCCAAGGCTCCCCAAGTGCTGCCTGGCCTCCCACTCCCACAGGGACTAAAATCTGCAGCAGCTACCGAAGACAAGATGTTTCCTGTTTCATTGTCATTGCTCAGCCGATGCAATAGAGAGGAGATCCCAGCTCAGTCATTCCCTCTGAGGTTCAGCGTGAATGAGCAGCTTTAGGACAGAGCTTCCTCAGGCCCAGTCAGCAGAGAGGTGTCCAAACAGACAATCGACTGAAACAGGAAGGACAGGCTTTACTTTTCCATTTCATAGGATACTCAGGGGCTTTGCAAGTTGCTCAAGAGTTTTCTCTTTTAATCCAACCCTCTACTGCCAAAGGCCAAAGCTCAAATCATTGAGATGTTTGAAGATTCCAGTCTTCTGTGCACAGGGCAAGAAGAGCCTGGAGGGGAGGTGCACTTCAAGCTGCGTAAGGAGCAGCCAGCCCGAGTAGAATCCCAGCAACCTTTCACTGTCGGGCATGGAGCTAGGCCGTGCCATGTGCCCTCTTCGGTATTCCTAGTGGGGCTGGCTGCCCGGCACTCCTGCAGGTTCTGGTGGCATTCTCAGGGAAGCACAGTGCCGACCGTTGCCCAATGGAGGGGTTTGGAGGGAGCTTAGCAGGTAGCAGCTACATAGACGGCACCTGAGGACTCAGCACAGCGAGCTTTCATCTGATTTTCTGAGGAGAGGGAATTCTGTGTGGAATTTTGAACTCTGCCGACGGTCTCTCTGTTGCTAGGCATAACGCCCCTAGATCCTACTAGGAAGATGCTTCAGGAGAATTAAAATGGTCACTTGGCCTAGGCTGCGATAGATCTGATAGAATAGGCTCTCTGCTTTGGGACAGGTTATTTTTTTTAAAGGAGAGGATCTTAGGGGGACAATCTGTGTCTTTCCTTGGCCATCTAATTCCCTCTTCATAGTCTTTAGCCATTTGATACCAAGGGGAAGAGGAAGGCCAGAGGTTCAAGTAGGGCCCCCAGTGAGTTTCCCACAAGCTAGAAAGATGCTAAGGTAACAAAGACCCTGAAGTATTTGCCCTGATTCTTCCCTATTTGGAGGCTGGCAGGATGGAGAATACTGGTTTGGGGGGAAATAGAGGAAAATGCTGTCTCACTGGGAAAAGATGTTTGCTTCTTTCCTACCCAGCATTTGGTTCTTTCTACCCAGTGGGTTTCTATCATGGCCACCATGGGAGAGGCCAGCCTGGATTACTCCTTTGCTGATTCTGGGTCTCATTCCACCAGCCAGGTTTAGACAGAGACAGCAGATACATTCTGGAAGCCAATCAAAGGCCATAAGCCACAGGCCTCTTGGGGAGCGAGAAGGTGACTGGCAAGGACCAGAGAGTAAAAATGAGGCTTGGTCAAGAGGAATGACTGTGGCTCTGTCCAGAGACAGCCTTGACAAGCTCTGGGCTGGTTCAGAGGCTCCTTCTTTGGGTGCATCTAGTTGCCCAGAAGCTAGAACAACTTGCCCTGGCTTGCTCGTGCCACTAGACACCTATGTCAAAGACCATATTGCCACGTGTCTGTAGTGGTCATCTTCTTCCCACATCTTTGCTGGTCTTGGATGCTATCTAGTTAATTCAGATTCTGGGGCTAAGAGAGGAGAGAGAGAGAGAGAACTCAGCATTGACTTGAAACAATCTGTGCCAGAGAGATTATAAACTCTTATTTCGGTGGCACACTGGTTTCCCTAAACTTCATAAAAGGCCAGAAACCGTGAATCTGATGACTGGACGAAATCCAGGGGGAAGCACACTGTCATGGCAGTGGGGAGAGGCGCAGCAATGCTTATGAAGGGGGGCACAGAATATTCGTGTCATAGGACAAGATACAGGTTTAATCTAGTCTAGATGCAAGCCTGTTCTTTCCCTTCTCGATAAGGAAAGCTAACAGAAAGTTTATTTAAATCACTTCTTGAGCTTTTATCTTTTTGACAATATACTGGAGAAACTTTGAAAAACCAGTTCCAGCTGATACACATATATGTATTTTTTGAAAATGTAAATACAACAGCCACATGTTAATCCACCCCGCACTGCTTTGAGTGAATATACTTCGAAAAAAACCTTTGTTAAGAGAGAAGGCTTTTTTCCCTCTAAACAGGAATGTAAATGTCTATTTTACTAGCTTTTGTTTTTCTTTAATGAAAAATGAAATACGAGACAGGCTGATGATGAAGTATTTGTCTTGCAGACTGGGCATTTTTATTTTTAAATATGATCCTCATCCCCTCCCCATGAAGTCCCAGCACGTTACAATAAGGGTTGTAGTCAATATGCACTGGTTGGGAAGAGACTCTCTAGTCATAGAGGGGTTTTAGAACCCAGTCCAATCTTTTATTTTTTTAACAGAAGAAGAGTCTGAAGCCCAGAAAGATAAAGTGACCTGGTGAAACTCATGTATTTAGTGACAGAAAACAGGCTTAAAACCTGGACTGGAAGACTGTCCAGTGCTCTGTGCTTCAGGAAGAAACCAACAAATTAAGGAGAGTGATACCAAGGACAGATCTGCAGCAAGCGTAGGGAGAGCATGAAGACAAAAACAGGAACCTTACTGGTCTGTGGCTTATTTAGATCTAAGACTTAAATGAACAATTTTGTTCTGCCAAGAATAGTTTTGAATAGTTTCTACATATAGGACTAAGGATCAAAGGGAACAAGATGGGAAGGCACAGGGGGCGAGAGTAAAGCAATGGCTTCCATCATTGTCATTAGCTGATTAACTCAGGTTTGGGGAAAATCCTACCCTGAGTCAAAGGAGGGGATTACTATTTGCTCCATGTCTTTTTAAAAAAATTAGTGAATGTTAAAAGAGTTTGCTCAGGAGACTGGGAGAGCTGTGTCTTGGTGGACAGGGGTCTAAAGTACACTGGAATTTACTGAGAAACTTGTTTGTAAAGATTATTACTTATTGCTGTTTTCTTACAAAAGTATATTTTGGAAAGTTGTATACTGTCAATTAAACTGCTTTTGTCTAAGCTGGCTCAAGCGCTAGTATTTTGCTCTGATTGGCTTCCATTCTTCACTTGCGCACATGGC EMBV3_24104 ACCTGCAAGAATCATGAGAATAACTGCCACCAAAGCCAGAAGCCTGTATCCCTGACCGAG Gene GeneID:538679|RNASE7:XM_002690738:454_cdna Constitutive 0 NULL GeneID:538679 10 GENE RNASE7 RNASE8 ribonuclease, RNase A family, 7 EMBV3_18607 TACCAGGCTCCTCTGTCCATGGAGTCCTCCAGGTAAGAATACTACCTGCTATGTAATGGC Gene BVT0102_240265 + 0 NULL GK000020.2:38163146-38182069 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117125 1 XLOC_071291 NonCoding TCONS_00117125 XLOC_071291 NonCoding NonCoding - 20:38165238-38168664 - TSS87593 3426 2 TCONS_00117125_5 96 0.0291885580852306 1 0 2.38278488770517e-05 0 1.35055397334802e-05 4.8477277195379e-06 3.45862685934431e-05 0 1.53196943544985e-05 1.55378274041382e-05 4.37573151522291e-05 0.000143515074028701 5.14500421611401e-05 6.15777902459478e-05 5.27627090653231e-05 4.11908668343981e-06 0 0.00269049617886925 0.000838353726475034 0.00947685299993393 3.34893898675774e-05 3.77833010676006e-05 0 0.000792752137175824 0.00110324208573917 0.00201606338313061 4.04464182771173e-06 9.4597679340865e-05 3.42040972383542e-06 0.000165413534136802 4.39266725792844e-05 0.000115822625927537 XM_005221596.1 LMBRD2 PREDICTED: Bos taurus LMBR1 domain containing 2 (LMBRD2), 0.0 6179 100.00 0.999708114419148 0 noncoding 0 0 0 0 -0.791245805728151 0.0879476418880526 -0.343665763415336 0.00365831240569765 TTATAATAATTGGAGTGTATGTAATACTTCTATAAAACAGTATAGATCCCCTTTATGACTTTTGAGTTATTTCCAAAATAATTTTGGTTGTTTAAGTGATCCAGAGTATTCAATTGTTTAGGCAGAATTTGTTACAGGATTTCATATATGATCATATAGGAACATTACCTGGCTGGGTAATTTTGTGTTTAGAAGTTAATTATTTAATCCCTGAAGTCTTAAGAGTTTATTGCTGGGGAACTAAGTTAATATTTGTTAAGCAACTTTGTAAAAACTGTAATATGAACAAAAGTTTTCTGTTTTGAGAATATTACTAAAATGACATCTACTGCAAAACATTACTACTAAATTCATATACTTTACATGCAAAGTATATTTCTTGAAGAATTACTTCTGACAATTACCTTTTGAGTGTTTCTTATATTGTAATAGATTCCTATTTAAACTTTCTAAATTATTTTTCTAAATAATTATTAGAATATTCAGTAAGCCATTGCAGAAAATAACAATAAGTAATCTATTAATTTCATGGATCTGTAAGTTGCTATTAACTTTTGTTATTACATCAATAATTTGTTATTATTAGAACATTTAAAAAATCATTATTAAAATAAGACTAATTATTAGAATTTGTTCTCTTACCAAATGAACAGGGGCTTGGGAATAATTTCCTTATACTAGAGGCCCTTATTTCACAAGAGTCATAAGAACTAAATAACTTTCAAGGGTTTTCAGTTTATAAAGAATAGATCAGAGGATTGGACAATCAAAATTTTTTAAAATATTGCTGCCAATTTGTTTTTGGACACTACTATTTGATTAGATTATCAGTTCTTACATGTGTGCTGGTTGTATACTCAAATGAAATTAAACGTGGATAGGCAAGTCAATGTGTGTTTTTTTAAGTATATTTTAGAATATTAATGAAAGAATTCATTGATATACAACAGCAAACCTCATTTTTGTATATGTGTAGTAGATTTAGAGAATGTTCTTGATTTTTATGTAGATTACTGTTTTAAAGGAAAAATAAACTCTCCATAATTTTAATTCACACTGTTCAGTAATGTGAGTTTTATATTTGTGATTTGTGTGGGCCATGCCTGAAAATCACAAGGATAAATATATTTGCACTAAGAGGCAGAACATATCCCTGAGAAATCTTAACGTACTTGAATTTCCAAAGTGTAATGGATTGTATTTATTAAATCCTAAATGTTAATAAGTCAATGGATCGAGACTTTTATCTTTCCTTTCTTTTCTCCCTTTCTCCTTTCATTCCTTTTATACCTTCTTTCCTCTCTGAAGCCTGTCTTTATAGTATAGCTTATAATGAGCTGACATGTTTTTCTTCCGTTTGTTTGGTGTATACGGTTGTTTTTGATGGTCAGTACACTCAAAAGGTAGTAGTTCTGACTACAGATCCCACTACTTGAATAGCAGTATTGCACTTAAAGTAGTACAACAGATTTTGCTAGACAACTAAGCAACATCTGGATATAAATATGAGGCGTGCTAGCTCACTGTGTTGTCTTTTTCGCCACTAAGTAGGACACTTCAGTAAAATGAAATATTCTCAGTGTAGATGTTTTAGCATAAAATTATATTTCTAAAACCAGTGATTATTAAAAACAAGCAAACAAACTCCAAACATTAAAAACCTTGAGACCTCATTTTATGAAAAGGAATTTATAAATAACATACATCGTTGTCAAAGTTTTCATTAGAAGAGGTTGAAACAATGTAAGAGTGTTACAGGGAGCCTTCTGAAATATTAATTCCCTTTGTGTGGGTTACTTCTTTTCAATTCAATGACTTATTTTTCTGCTCAGAGACCTGGAAGACTAGGCAGTGTTATTCCCTTTACTAACTCCTGGAGACCAGGTCCTGTGAGCCGTCTCTACCATCAGAGCAGCTATTAGCCCTGCCCCATCCCCAGTCCTATTGCAGTGGTAACATACCACACCCCTAATTCCTTTTATGTTCAGCTTGGTTTTCCTAACATTTTATATCCATTGTGGTAGATTGAAGCCTCATCACAATTTTAAATTTGTTAATGAAACAAGAATAATGGCATGTTCCTCTTCTCATCGATATCCTAAAAGACTTTTGTTTTTAACACACTCCCTGGAGAGAATTAACCTTTTTTTCTATGAAAATCTTTTCTTTTGTGATTATCCTGATCTCACATCATTTTGCAAAAGGAGATTTTTACTGTACTTAGTGCAAAAGAGTAGAAAGAATGATTTACTGTGGCAGACATATATATAAAGTCATAATTTGTTAATCTGACTGTACAACACCATTTTGAGTTGGTATTATTGACACAAATCTTATCAGTCTAGTCATTTAGAGCTGTATTTCGCAAAAGAATGCTGGCTAGCATCTTCCCTACTTAGTACACCAAATTGTAGGGGAGAGACTATGTATTTTTTTTTTTTTAAGCAATCCAATGGATTTGTTTTTGTCCATATTTTGTAAACAACTTGAAGAACTTTTCTCATTTCGCAGATAGAGAACATGTGGACCTGTCTTTTAAATAATTGTAATCTAATATATATATTTATAAATTATAGCATTGGAAAAAGAGCTCTAATAATGATGTTGTTACTTCCTGGTATTTAATTTTTATAAAATGTTTTTGTAAATAACTAATTGTAGTATTGCTTTTAAGTAGTTTTAAAATCTTTCTAAAATAAGTTCTGCCCAGGACTTATTTCCTATTCGAAAGTTCAGTAGTCTAGTATGAGTTTGAAATATTCCTACATCTCTTCAGTATCTTTTTGTATATACCAGTACTCAAGCAAAGTATACCAAAAGCCTAAGTTCTGTGTTGCATTAATAACGTACTTGTTATTTATCTTATTCAGTGGATTAGGTGAAGTAGAGAGTAAGTCTTTTCAAATGTGCATCTGATCATAAATTTCAAAATGTTTATTATGTTCATTTTTGGTGCATGATGCCAAATTTATCTTTAATCAGCCACTACTACCTGGTTGTTGTTCAGTTGCTATTAATAAGTTGTGTCTGACTTTTTGCAACCCCATGGACTGTAGCCTACCAGGCTCCTCTGTCCATGGAGTCCTCCAGGTAAGAATACTACCTGCTATGTAATGGCAAATGTTTCCCTTTCTGATCAATGGGTTGTAGATATAACTATTTTTCTCTGCAGATTCTCACTAAATATGTATTTGAAAAAAACGTGCAAAGTGCTACCTGTAATTAAGTTAGCATCTTTGGCCTTATCTATGCATAATGTTCTCTCAATTTGGTTTTGACAGACTCATGGACTTGGAATTGCTTTGTAGTATTTTAACTTATTGTAATGTAATGAATTTTTTGAGATGTTTATTTGATTAGCTGTTAAAATGTAGGAAATTATGTAGCTTTGCATGAAATAAAGTACATTTCTATAAGTTACTAAGA TCONS_00113893 . 3' 82 TCONS_00113893 . 3' 3507 EMBV3_02065 ATGATGGGAAGCTGGAATTAACTGAGATGGCCAGATTACTACCCGTGCAGGAGAATTTTC Gene GeneID:539930|CALB1:NM_001076195:73_cdna UTR3_Alt 2 NULL GeneID:539930 14 GENE CALB1 MGC138959 calbindin 1, 28kDa EMBV3_42052 TTTGTCTTCACCCATATCCTCACTGCATCTTCAGCTTCATCCCCCTCCCTACCATCACTG Gene GeneID:503553|TKDP2:NM_001012683:832_cdna Constitutive 0 NULL GeneID:503553 13 GENE TKDP2 NULL trophoblast Kunitz domain protein 2 EMBV3_25073 ATGCCTTTTAAGCACTTAACGTGGTGTCCGGAACACAGAAAGCCCTCAATACGTGGAGGC Gene GeneID:540301|PNMA2:NM_001046473:7_cdna UTR3_Alt 1 NULL GeneID:540301 8 GENE PNMA2 MGC137318 paraneoplastic antigen MA2 EMBV3_07478 GCAGTGCCTGAGGAAAAACTATAAACGATACATCAAAAACCACGAGGGCGGGCTGAGCAC Gene GeneID:407132|SLCO3A1:NM_001001134:11_cdna Constitutive 0 NULL GeneID:407132 21 GENE SLCO3A1 NULL solute carrier organic anion transporter family, member 3A1 EMBV3_23695 CACTTGGAGCTGTCTCAGGGCTATGCTCCTGGCTCCTTTCCTGACAACCTCAGCTTTTAA Gene BVT0102_033627 + 0 NULL GK000017.2:3319248-3829563 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078592 1 XLOC_047480 NonCoding TCONS_00078592 XLOC_047480 NonCoding NonCoding - 17:3720690-3721955 - TSS58532 1265 2 TCONS_00078592_2 67 1 0 0.00228016432899652 0.000111207953372306 8.04695410880491e-05 0.000203500532159794 7.80581641661627e-06 0.000214906175478348 0 0 0 0 0 0 0 0 0 0 0 0 3.96811155939678e-05 0 0 0 0 0 0.000202651119835993 0.00010025162786758 0.000477069015741762 0 0 0 0 noncoding 0 0 0 0 -0.128340076552444 0.424497401754138 -0.00263361969834797 0.960497574346766 CTCTCCCCACACCCTTCCAACCTGTGCTCAAATACTAGCCCCGAGGAGGCCCATCTGACCGTCCTGTTTAATACTGCAGCCCACCTCCACCCAGAACACTGGACTCTCTTCACCCAGCTCCAAGCTTTCATTTTCCAAACTCTTAGCACCTTCAAGAACAGAGAGGCAGCATCCGCACAAAGCCCTTAAAAAGCTGAGGTTGTCAGGAAAGGAGCCAGGAGCATAGCCCTGAGACAGCTCCAAGTGCTGTGGAGACACGAGGGAAAATAGATGTAGAAACGGGAGAGCCAGGCTGGAATAGAATGAGAGCAGGAATCCAGCGTTTGCTCAGAGCCTGGAAGGAAGTGAGAGCTGGGCTGGGTGATGGCGGACGAGGGGCACAGATGTGGCCTCTGGCAAATAGGGCCCGACTCGCCAAGGCATTGCCCTCCCTCCGAGGTCTCCAAACACACCCGCCTTTTACCAGGTCCTCTGTGTGCGGAGCTGTAACTGCACAGGGACCGTAGCTACTTCTGTGTACGACACGCCTCTTTCCTAGCCCCGCCCCCACCGCCCTCTGGGGAGCGCCCGACTTTGGCCAGCCCTGTACCATCACTGTGCATGTTGGACAGATGCCAGCAGAAAAAGCGACGGCACTTGAGTGGCTGCGTGTGTCCAGTGAGTGGTGATGTTCTCTGTGTGCAGGGAATATGGAGAAATCCAACCGCAAACAGCACTGCTCTCCTCCCAGCCCCACATTTGTAGAATATTCTGGAAAAGGCTCACCTCATCCAAAGAAGACCTAAAGTGACGATGCTCCCCTACAACCATCAGGAGACCCTCAAAACAGTCACTTTGGTCAGAAAGGGAAAAGAAGCCTGCTCAGTCATGCTAAGGGGAGAGAGGTGTGTCTGGGATCAAGATAAGTTCAAGTAGTCTCATTCAACAGTTTTGAGAAGGTCACATGGAAGAATGGTATCTCTGACCCAAGCATCCAGGCCTGGGTGTTTTCTTAAACAAGGCCCCTCTCTTCCTAGTAGTCCTCAGAGGAATTAGAAAAATATATGCTGCACAGATTTCTTGAATTCCCCGTGTGGGACAACGGTTAACTGTCTTCTTTGTCCCAAAGGAGAATAGTTGTCTGTAGTATCAGACCACATGTGTTAGCATCTTCCCTGCCCTCCTGAGCTTGTCTGTGGGACTGTCCGCTTGTAAAACATTTCTATCCCACAGTGTCACAGTCAATCACTAGAAATTTAATTTTACTTTTACACTTGTCCAGCTCC TCONS_00074696 . 3' 67700 TCONS_00074696 . 3' 68964 EMBV3_02901 GTTCATGACCTCCGAGAAGAGCCAAACGCCCCTTGTCACGCTGTTCAAAAACGCCATCAT Gene GeneID:281416|POMC:NM_174151:18_cdna Constitutive 0 NULL GeneID:281416 11 GENE POMC NULL proopiomelanocortin EMBV3_41915 GCTCCGGGGCCAGTACCAAACTCTCAGTCAAGATCCAAACAGTCTTTCAAACCTAGATCA Gene GeneID:516399|UGGT2:XM_002691971:32_cdna Constitutive 0 NULL GeneID:516399 12 GENE UGGT2 UGCGL2 UDP-glucose glycoprotein glucosyltransferase 2 EMBV3_09864 CCTCTCCTTCTAGTTGCCCTCGCCAAAGATTTCTCTCAAAAGAGCTGGCACCAAATGGGG Gene GeneID:538004|NAGS:XM_002696039:319_cdna UTR3_Alt 2 NULL GeneID:538004 19 GENE NAGS NULL N-acetylglutamate synthase EMBV3_05631 CACCTGGCTGCCCATAACCATCGAGATAGAAGATCGGCGGCACCGAGGACATGCTCCTGG Variant GeneID:506540|TCL1A:XM_002696765:436_cdna 336^499 1 EMBV3_17830 GeneID:506540 21 GENE TCL1A NULL T-cell leukemia/lymphoma 1A EMBV3_36857 TTTTAAGGTACCAGAGGCTGGAGGTTGCTGTTTAGTAAGGGCTGTAGGGCCTGCTTGTTC Gene BVT0102_011170 + 1 EMBV3_29525 GK000012.2:78546609-79000722 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035729 TCONS_00035731 1 XLOC_020986 Coding TCONS_00035731 XLOC_020986 Coding Coding RAP2A 12:78507479-78549442 = TSS26150 5195 1 TCONS_00035731_2 183 2 0.876245174205233 0.000178952826688084 2.09817839213094e-05 0.000263845935921456 0.000547355454614231 0.00118222236421771 7.6228856463438e-05 0.000891981440795639 0.000916154198891615 0.00152251358965691 0.000297751461795322 6.84527147332996e-05 0.000176113650521637 0.000290942783448955 7.58556059670222e-07 0.000546491898477909 0.00236110234310761 0.00198275017946765 0.00120112875276212 0.000304470731775191 5.21521721006743e-05 0.000240637971846957 0.000553155375375495 0.000415410711990763 0.00088534777299296 0.000219547819156718 0.000739184529183421 1.88095853355206e-05 0.000173319155853514 0.000215274711093595 0.000303307898906272 XM_005213936.1 RAP2A PREDICTED: Bos taurus RAP2A, member of RAS oncogene family (RAP2A), 0.0 7460 98.80 0.816169393647738 NM_021033.6 RAP2A Homo sapiens RAP2A, member of RAS oncogene family (RAP2A), mRNA. 0.0 4388 82.36 0.838498556304139 TCONS_00035731_2 sp|Q80ZJ1|RAP2A_MOUSE RAP2A_MOUSE Ras-related protein Rap-2a; 3e-134 378 100.00 0.994535519125683 4 coding 1 0 1 1 -0.00953454433865695 0.948117333566986 0.0563747948752156 0.434180009931564 GGGCCGCCTTGCCACCTGGCTCGGCCCCTATGCCCAGGGCTGCGCTTGCCTCCGCCGGCGCCCGGGGGGCCGCGGCGGCCGTGAGGTGGGGGCGGCCGCGGGAGGCGGCGGGGCCGGCCGCCGGCGCAGGGTCCGGGCGTGCAGCAAGGCGGGCGTAGGTCTATGTCGCGGGCGGCGGCGGCGGCGGCGGCCGCGGAGGGACGATGCGCGAGTACAAAGTGGTGGTGCTGGGCTCGGGCGGGGTCGGCAAATCCGCCCTGACCGTGCAGTTCGTGACCGGCACCTTCATCGAGAAATACGACCCCACCATCGAGGACTTCTACCGCAAGGAGATCGAGGTGGACTCGTCGCCGTCGGTGCTGGAGATCCTGGACACGGCGGGCACCGAGCAGTTCGCGTCCATGCGGGACCTGTACATCAAGAACGGCCAGGGCTTCATCCTAGTCTACAGCCTCGTCAACCAGCAGAGCTTCCAGGACATCAAGCCCATGCGGGACCAGATCATCCGAGTAAAGCGGTATGAGAAAGTGCCGGTCATCTTGGTGGGGAACAAAGTAGACCTGGAAAGTGAGAGAGAGGTGTCCTCCAATGAAGGCCGGGCCCTCGCCGAGGAATGGGGCTGCCCTTTCATGGAGACATCGGCCAAGAGTAAAACCATGGTGGACGAACTCTTCGCCGAAATCGTGAGGCAGATGAACTATGCCGCACAGCCCGACAAGGACGACCCGTGCTGTTCCGCGTGTAACATACAATAGCACTGACATGTGGCTGCCCGCCCCCCACCATTGGAGGCGACACCAGCCTCTCCTGCTCGACCATGGAGCCTGCAGGGTGTGCGGTGTGAACCTCCAGGGAAGCAGCAGATTGTCCTTCAGAGCCAAGCGGCGATTGTCAGCTGATATCTCTGAGTCACCTTTGGGTCCAGTTACTGCAGTCTTCACCATCGTCCTCAGTCCCCTCCAGGCACCTGCAACTTCAGGCGTCGTGGCCCAGTTGATCCACAGGGCGACCTCCTTCGAAAGCTATGATGGCATTGTCACTTGAGTTGACAGAAGCAACTATGGTCAACGTTAAAAGTAATCACGGGACAGAAACCGGAAGAATTCCTGTGACCGCTTAACCATTAAAATATTTTGTCTTCTTTAAAAAAAATAGATGAGTCAAGGAGAAATATTTTCCTACCAGAGTACTGAATTTCAGGAACTGAGATAGTGCTTCTAACCAATGTATCACATCAAGGAAGTAATAGCAGCTGACCTGCCGACAGCATTCCAGGGAGAGATTCTTTGCTCAGCTGACACACTTCTGTTTTTCAAAGTTGATGCTTAATTGTAGATGTTATCCTAATTTGTGACACAGAACTAACTCACGCACCAGTCTCTGATAGAGCCAGAGTCAGCACAGGTTGGGTGAAAATACAGCCTGATGTTAGAATGTCATCACCTGCTTTGCCCAGAAAGTGGAGACTCTCACAAGGGTTTGAGTCAAATTAAAACCCCAGACCCACCCCTCTGTTCACCAAGCAGGGATGGTCTTTGTTACTTTACTGAACAAGAAGGAAGCAACTGTGATGGAAAAAGATTGCCTAGCCTTACTAACGAGAAGCATTCCAGTAGATGAACTAGTACCATCGTGTAAGGAAAATGAAGCCATGTTGCATCCACATGTTCCCGTTTGCAGAAACCTCGCAGGACAGTACCGATATCTTGCATTTTTATGTTCGTTAAAGCAGCAAATTCCTTCTTGCCTTTAAGGGCTATGGTTGTGGTGTGATTCTTGGCTAACCTGCTTTCAAAATCAAGTTTTCTATAGCAGAGCTTTATTGCAGGCATTAAAAAAAAATTTGAATAACCATGTGAAATAATTGGGGCTTAAAAGTAGAACAGAAATTATAGAGTGGAAAGTAAGAGACAAAAAAAAACCCTTTAATTTTCCTGGAAAATTCTATGAAGATTTTCTTACAACAATTTTGGCCTGATTACTGAAGTGGCAAATAAAGCTAGAGTGAATATTTTGTCTTGAAAAGGTGCTCAAGCCCTGACATTTTTGGTTTTTATAGCCGCCAAGTATTTATCATTTGCATGACTAATGGCACAGGAAAAACGTATTCATAAGTTTTACAATCAAGCGCAGAAGGGTTTTCAACCACCTTCAGAGTTATAAAATGCCGAAGAGAGTGTTTTGAGCTGATCCTCTGGAGATGAATTTGGCCTTCAGAACTGCAGTATCACTGAGCCTGTGATCTGCATACCGCCTCAAATTTCTTGTCGGTTTCACACTCTTGTGCAAGTCACCTTGGGTCTTACGTGTGTTACTGAGTGAGAATGTGTGTTTGCGTGTGCACGTGCGTTAATGTTCTGAAGAATTTGGCACAAGTCAGAGATAGTTGCCTATACTGAGAATCTGTCCTGCAGAATACCATGGAGCAAAAACATTTTTTTTGTCTTTTTTTTTTTTTTTTTAATACATTCTTGAAATCATTGCTAGCCCTCCCCCCAAGTGTTTAGTAAACTGATGTTAATGTTGGAGGAGAGAAAAAAGGTGGATAGTACTTTTCATAAATGAGAAGACAGATGTGTGGGTCAAACCAGGCATGGTTGTCAAAAGTCTTTGAATTGTGAATATTTGCATTCTTCAATATAATTTTTTGAATAATTTCCAATTATGAAGCACCTTTTATAGGCCAGAAAGTTCTAACCAGTTTTACTGCATCAAATTTGGTCATGTAAAAGGTGATTTGACTCAATCATGTAGACAAGTCAGTGATTCAAGAAGTATGATTTTTATCAACTGAAAGAGAAATATTTGTTAGTGCACTGTTTGAGTTTTGAAGCCTCTGACTTCTCAGAATGATTCTGGTTTTTAGAATTCCATATTTAGTAGAAATTTATGGCAAGTAAGATTACATATAAAAAATCTATAAAGACTTTACGGTTTTACATTGTGGATTGCTATGCAGACAAAAATAAGTTAAATAATGTGAAAGGTATGGCAGGATATAAGGTGGAAACGATTATCTAAATATTTGGGTTTTAGTTAGATGTGTTTATGTCAGACAATAAGGTGGTTGTTTTTATTTTTACTGTAAAGATGTTAATAACTGATATGGCTGCCTGATCAGTGTTTCCACCCAGCCCTGCGTATTTAGTGACAAAGCATCAAATATATCCAGAAACTTGGAAACCCTCGTGTGCTCTTACTGTTGGTGTTTCATCTGGTATGAAAATAACTCAGCTTGAATGAATGTGTTTGTTGAGATGTTAATACAGAGCTTAAGAACAGGAAGATGAAATTTGTTGGCACATGATTAATAGTTGGTGACCTTGTGTCGCTATTTATTTTATGCCCTGATCAGAATAGCAACTAGATAAGTGAAAGTTTTTCTAACATGCCTTAAAAATGTTATGGTTTGATCCAAAGACCCACTTTTTCTTTAGCTACTACGATAAGGTTTTCTTCTTTTTTTTTTCCTTTGTTTTGTCTTGTTTTACTTTTATACAAAAGCAGCATTTTTTTTTTGTAAGATTTTTTGTTCTGTGTCGCAACTTTTTTGTTGTTTTTTGGTTCTCTTAAGCTGTGATAGTGATGGTAACTGATGCCTTTCTTTTTGTTCAACTCATACAAAACAAGCCAGCATCTGATCAAAAGTATTACATAAAATCTTCCTTAAACTATGGAAAGGTGCTTTGATGATTTTTCTTCTTTGGTTTGTAGAATTAGGACTGAACTTTTGACTCTAATCACTACAGTTGCCATCACTTTTCTGTGGTCAAACTACTGATATTTGCTTTTCTATATAAAGAAATGTTGCCTGAGGATGTCTGCTGCTTGTTTTCAGGAGTCGTCCAGTAGGAATATTGTCTATGTGTATGAATATGAAAGTGCTTATTTCGCTTGTTGCCATTGGGTTTTTGTTTGTTTGTTTTGTGGTTTTTTGTTCTTCTCGGTAGTCCTGTGTTAGCACTTGGGTAAGCTTTAATGGTCTCCTTAGCCAATCCAATGTTAAAGACTATGGGGTCTTTTTTTTTTTTTTGATTAACGTGTCTGTCATTGTGCATCTCTTAAATCTTGATCAGGGTTTCAAGAATGACTGCAGTGGGTTTTGGAAACAGACTTATCCTTATTGATTTGGGGTTTCCCAGAGATAAATATAGTTCACAGTTAATTGTTGAGCTCTAATACAACTGACCATTTAAAATTGAACAACAGTTTATTGTTTTGTAACAGTGTCAGTTGTTAAACCTTGACCTTTCAGTTAAAACATGAATTGTAGTTATAACTCAATGCAAATTCAACAGTTGTATTTGGAGTTAAATTATTTTAACAAATAAATTTATTTAATGAAATTGCCTCTGGATTTTTTCTTGTTGTTTTATATGTATTCATGGGTGAAATGTATTTTTTCAAAAACTAAAAATTGCTGTAGAATTCTGTTTACAGAAATGGTCAAGCTGAGAATTCATCATATTAAAAAGGTTAGTAGATCATTTTCATAGCTTTTAAAAATAAAAACATGAGAAAGATTTTTAAATTAGTAAGTTTAGATATGAACAGTACTTTATATTTTTGATGATAGCTGGCTAATTTGAAATCTCAACGGTATTCACGTTCACAGAATTGTTCTAGATAATTAACATTAATTAGCAGTTGCTTTGTGGCCCTGCTGGTATCACAGAAATGTATCTGTGTCCTTCCACTGATGGCTTGGGGGTGTCTCTTTGTTTAGGTCTTGTGGATTTTTAAGGTACCAGAGGCTGGAGGTTGCTGTTTAGTAAGGGCTGTAGGGCCTGCTTGTTCTATATAGGGCCCTGTGAATGTTGACAGATGCTGTTAATTATATACAGCCTTCAGCTGCTCTGATAAGGAGCCCATTCATTCCCTAAGCCAATTTAAACTGTGCCTTTTGGTCATGTTGCCTTCAAACTGTGTTGAAATTTCCTGGCAACATTCCACCAGTTTAGAAGCCTCATTGTTTTGGAATAGAATAATTTGAATGAATATAACAGAGGCACTGTAGGCAGAATCTCAAATATTTAAAGGAAAATGTGTCTATATTTTAGTATAATAAACAAGTATCTACTGGTTGGCCTCATAATCTCATTTGAAGCCTTTGTAAAGTATTCAAGCCTATCACATTCTGCTTCCAATTGGGAGAATTTCTTTGTGAGTGGAAAATAAAATTTTGAAATTCTAAC EMBV3_21704 AGGCAAACACGAAGATGGCCAAGAACAAACTAGTAGGGACTCCAAACCCCAGTACTCCTC Gene GeneID:614417|RBPMS:NM_001046535:28_cdna Constitutive 2 NULL GeneID:614417 27 GENE RBPMS MGC137681 RNA binding protein with multiple splicing EMBV3_22108 GTTCTAGACAAATGAGTAAAATGTAATTCTGGTGGGGTCCAAAGTAGACGTTAGTTGGGC Gene GeneID:785123|ZBTB10:XM_002692740:226_cdna UTR3_Alt 2 NULL GeneID:785123 14 GENE ZBTB10 NULL zinc finger and BTB domain containing 10 EMBV3_07387 TCCCCAACTTGCCACTAGAGACCCAGGTACATCAGTCCCAGCTCCATCCTAAACTCATGA Gene BVV0102_097633 + 0 NULL GK000007.2:59690013-59782766 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213785 TCONS_00213787 TCONS_00213784 TCONS_00213788 TCONS_00213786 TCONS_00213782 TCONS_00213783 1 XLOC_130532 NonCoding TCONS_00213787 XLOC_130532 NonCoding NonCoding PPP2R2B 7:59694030-59782908 x TSS160065 2077 2 TCONS_00213787_1 41 0.23736157920077 3 0.976664378860673 7.2702503987536e-05 5.01114613189687e-05 0.0027988901339876 3.0316112447159e-05 2.51275508491561e-05 1.72644812781089e-05 2.92504894877785e-05 0 4.48369976441455e-05 2.40345274064031e-05 9.16639603559086e-10 1.59452337053779e-16 1.41601333241115e-05 2.3741394924769e-05 4.56792238661046e-05 0 0 0 5.04002625800667e-05 0.00197942154490287 4.40409532113244e-06 0 0 0 3.96291642071757e-05 0.000899852528429532 0.000306835212012994 3.38331853838242e-11 0 4.06338032195239e-06 XM_005206391.1 VDR PREDICTED: Bos taurus vitamin D (1,25- dihydroxyvitamin D3) receptor (VDR), transcript variant X1, mRNA. 2e-52 212 96.15 0.0621088107847858 0 noncoding 1 0 0 0 -1.8021573588972 0.0341365825861232 -0.0571008730913403 0.419666304798354 GAAAAGTGAAAGGGAAGTCGATCAGTCGTCTCTGACTCTTAGCGACCCCATGGACTGCAGCCTTCCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTGAGCTCTTACTAGGAGCAGGTAAAGTTTATCCTATAGCTCAGTTCCATCCAGGGAAGGGGGAATAATAAAAACATCCATTTTTTTGAGTGAGTCCTCAGTGCCCATCATTGTGCTAAGCATTCTATGCCCCAAATCTTCACAACAGTTCCTAAAATACTATCATTTTCTCCTTCTTACAGGTGATGACCTTGGGGCATAAAGAGGTGAATAACTGGCCTATTAGGCTTTCCTGGTGATTCAGGGGTAAAGAATCCGCCTGCCAATGCAAGAGATGTGGGTTTGATCTCTGGATCAGAAGGTTCCCTGGAGAAGGAAATAGCAACCCAATCCAGTATTCTTGCCTGGAGAATACCATAGACAGAGGAGCCTGGTGAGCTATAGTTCATGAGTTCTCAGAGTCAGATGTGACTTAGCAACTGAACAACCACAAACACCCCCATGTGAATGTAGGTTGCACAGCTACTAGATGAGGGAGTTGGGACAGAGACCCCCATGGGTCTGACCCCAGAGTCGGGCTTCCAGAGTGAGTATTGGTAAGCTGTATGCTGCTATTCTGCCCCACTAAGAACGTTCTGGGTACTAACTGTTCTCTAAACACTACAGTTGTGAAACTGATCCAACCAAGGCCGATATTCTAAGGCCCAAATAATGGACTATAGGTCACTTCAACAAGCATGTTTTGAGCCCTTGTGCACTGGGAATATAAAGCTCGTGTATTCTTTTCTTCTTTTCTGGGGACCTGGAATCATGAGTTTAGGATGGAGCTGGGACTGATGTACCTGGGTCTCTAGTGGCAAGTTGGGGACCTGGAATACCCTGGGTCTAAGAGGAAGTGGGGTGCTTCCGGTTCCTGAGTCCAAGAGAGGTGCTGGGTATAGGGGATCCCTGAGTAGAGAGGGAGCTGGCCCTCGGATCCCTCAGTCCTAGCGAGGGGACAGGTACGTTGGGCCCCATCGTCTTGAGTGGGAGTTGGAAACCTGCATGATGCTTGGGTTCAGGAGAGAAGCTGAGGGCCTAGGATCAGAGCTTGGACCTTATATGAAGCAGGTGTGAGGTGTGGAATTAGAGTGTGGTTCCCTTGGTCCTAGGAGGGAACTGAAGGCCCTAGCCTCTTGCGTTCTGGAGGGGCGCTGTTCCATGAGTCCTGGAAGAGAAGTCGGGGTTCTAGATCCCTAGGTGGAGAGAGAAGGGGCAGAGGGTATCGCTGGGTTCCCTCTTGCTCTCTGGGTCCCCCCACCCCCACCTTCACTCCCACCCCTGGAAGCGCTTGTCTGCAAGGCCTCAAGCAGGCAGGTGCCTGGCCCACCTGGCGCTAACCCAGTCTCCACCTATTTTTCTTTCAGTGAATATTTGCTGAGCCACTTTCCCTGGGCCAAACCCAACGCCAGCCTCCGGGAACCCACTGTGGTAGAAGAGTCCCATTTTCTCCAGGAGCTACCAGGTAGTCGGAGAGATGGACAAAGGAGAAGTTGCGGAGAGAGTGCTACGAGATACTGGCTGAGGAGCAAATGCCAGAGAACAGCTGCTTCTCATCAGAGAGGTGAACGTGGCTGGCTTGCGGGGTCTGAGAATAACCTCCTTCCACCTGTGGGCTGTCAGGCCCTGGATGTTGCACGGAAGCTCTGGGAGGAGCAGAGTGGGGCACACGGGGCGGTTTGACCAGCTGCTTTTGGTTGGCTTGTTAGACAGCGTTCAGTTCCGTCTCTGCCAGCAGTAGGGAGCTCAGCCCTCGGGTCTACAGTGTCTTTGCCACCCGCGCTCCCACTCTCAAGTTCCTGGTTTTTGTGAAGCATCCTTTGCCGTGGAGTTTCCTGAGTGGCGTGTCCCATTACTTCTCGTCTGGCATCTTGGAGTGTTGTTCCAGACTGCGGGTGCAAAGCTGCGTGACCTTCCATCTCTAACACAACCTCATTTTATCTCAGCAGACACCTAGAAACAAAACAC TCONS_00217284 r 5' 0 TCONS_00217275 TCONS_00217276 r 5' 4019 EMBV3_32174 TCTTCAGAAACCGGTTTGAAGTTAGGAACGGTTCCCCAGGAGGCACTAAGGAGAACCCTC Variant GeneID:616451|TRMU:NM_001163188:52_cdna 524^582 2 EMBV3_28893 GeneID:616451 5 GENE TRMU MGC133954 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase EMBV3_40619 CGATGAGCTGATTGACCACCAAAGGAAGTCACTGAAAAAGTGATCTCAGATATTGCTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40813 TGAACCCCAAGGGCGAGCTGATACAGGAAAGGACCAAAGGAAACAAGTCCTCGTACCACA Gene GeneID:514448|LPIN2:XM_002697792:383_cdna Constitutive 1 NULL GeneID:514448 24 GENE LPIN2 NULL lipin 2 EMBV3_25496 TTTTTAAAACATCTCAATGTACTAAATCTTATCCTGGTATAAAAATGTAATATTCTTTCA Gene GeneID:781153|FAM108B1:NM_001101278:5_cdna Constitutive 2 NULL GeneID:781153 8 GENE FAM108B1 NULL family with sequence similarity 108, member B1 EMBV3_22681 AGAAGCCCGCTTACAATTTTATAGATAATGTCTCTCTGGGGCTGCGATTGCCCCCTTCCG Gene BVV0101_077964 + 0 NULL GK000009.2:29161566-29977334 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00206812 TCONS_00066283 TCONS_00231338 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00220662 TCONS_00153678 TCONS_00129573 TCONS_00175855 TCONS_00177370 TCONS_00218945 TCONS_00250930 TCONS_00175580 TCONS_00008224 TCONS_00166977 TCONS_00021569 TCONS_00137878 TCONS_00244654 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00189806 TCONS_00229819 TCONS_00185881 TCONS_00062744 TCONS_00109027 TCONS_00155780 TCONS_00000305 TCONS_00124585 TCONS_00251707 TCONS_00130084 TCONS_00064462 TCONS_00039226 TCONS_00178325 TCONS_00161667 TCONS_00040836 TCONS_00010054 TCONS_00065823 TCONS_00140840 TCONS_00209032 TCONS_00110323 TCONS_00063486 TCONS_00020756 TCONS_00070839 TCONS_00010471 TCONS_00021595 TCONS_00088088 TCONS_00199424 TCONS_00155778 TCONS_00059708 TCONS_00071033 TCONS_00161835 TCONS_00080066 TCONS_00198813 TCONS_00177281 TCONS_00170823 TCONS_00116665 TCONS_00249569 TCONS_00231612 TCONS_00070810 TCONS_00131550 TCONS_00199037 TCONS_00122479 TCONS_00152645 TCONS_00180345 TCONS_00218178 TCONS_00249639 TCONS_00210234 TCONS_00252353 TCONS_00229957 TCONS_00152736 TCONS_00250720 TCONS_00116100 TCONS_00010366 TCONS_00038381 TCONS_00242885 TCONS_00207069 TCONS_00175546 TCONS_00209846 TCONS_00023373 TCONS_00209711 TCONS_00116172 TCONS_00252107 TCONS_00009884 TCONS_00148280 TCONS_00249011 TCONS_00176735 TCONS_00123620 TCONS_00031939 TCONS_00039951 TCONS_00169199 TCONS_00131137 TCONS_00155779 TCONS_00063181 TCONS_00234065 TCONS_00009259 TCONS_00111497 TCONS_00209636 TCONS_00020017 TCONS_00089952 TCONS_00245928 TCONS_00233372 TCONS_00244651 TCONS_00153218 TCONS_00240534 TCONS_00123168 TCONS_00085967 TCONS_00039904 TCONS_00199802 TCONS_00250246 TCONS_00238327 TCONS_00040179 TCONS_00200529 TCONS_00064619 TCONS_00244653 TCONS_00135546 TCONS_00115148 TCONS_00250726 TCONS_00221884 TCONS_00142649 TCONS_00122313 TCONS_00020023 TCONS_00251907 TCONS_00007359 TCONS_00218552 TCONS_00166449 TCONS_00031910 TCONS_00251929 127 XLOC_107421 XLOC_069855 XLOC_125332 XLOC_040997 XLOC_140827 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_133979 XLOC_093441 XLOC_078286 XLOC_105634 XLOC_107144 XLOC_132264 XLOC_153873 XLOC_105361 XLOC_003782 XLOC_101813 XLOC_012242 XLOC_084087 XLOC_150512 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_115843 XLOC_139313 XLOC_111934 XLOC_037471 XLOC_064932 XLOC_094822 XLOC_000084 XLOC_076129 XLOC_154648 XLOC_078795 XLOC_039186 XLOC_023044 XLOC_108098 XLOC_098554 XLOC_024650 XLOC_005606 XLOC_040542 XLOC_085269 XLOC_127543 XLOC_066227 XLOC_038213 XLOC_011431 XLOC_042616 XLOC_006022 XLOC_012268 XLOC_052875 XLOC_121077 XLOC_036490 XLOC_042806 XLOC_098720 XLOC_048950 XLOC_120466 XLOC_107055 XLOC_103665 XLOC_070831 XLOC_152512 XLOC_141100 XLOC_042587 XLOC_080255 XLOC_120690 XLOC_074034 XLOC_092410 XLOC_110113 XLOC_131641 XLOC_152582 XLOC_128744 XLOC_155294 XLOC_139451 XLOC_092501 XLOC_153663 XLOC_070269 XLOC_005917 XLOC_022206 XLOC_149548 XLOC_125588 XLOC_105327 XLOC_128357 XLOC_014040 XLOC_128222 XLOC_070341 XLOC_155048 XLOC_005437 XLOC_090162 XLOC_151954 XLOC_106509 XLOC_075172 XLOC_018184 XLOC_023768 XLOC_103305 XLOC_079842 XLOC_037908 XLOC_143544 XLOC_004815 XLOC_067397 XLOC_128147 XLOC_010695 XLOC_054733 XLOC_150855 XLOC_142854 XLOC_092983 XLOC_147198 XLOC_074722 XLOC_052005 XLOC_023721 XLOC_121454 XLOC_153189 XLOC_144994 XLOC_023996 XLOC_122181 XLOC_039343 XLOC_081769 XLOC_069449 XLOC_153669 XLOC_135195 XLOC_087074 XLOC_073868 XLOC_010701 XLOC_154848 XLOC_002920 XLOC_131872 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00218178 XLOC_131641 NonCoding NonCoding - 7:99213677-99241810 - TSS162275 5729 2 TCONS_00218178_2 157 0.905568161982894 3 0.796459547845869 0.000886771403701653 0.00102376193620026 0.000637427881539969 0.00060712227498956 0.000861658363640783 0.000240511398755287 0.0006507876490391 0.000334216051602831 0.000730185142003349 0.000214057065001311 4.3941352307135e-05 8.08315428101829e-05 0.000233250163478171 0.000763452724724909 0.000798732785629046 7.35735537230835e-05 3.13399592248213e-05 3.72164237701071e-05 0.000220143769383598 0.000283865233785678 0.000112882883633591 4.31142807595197e-05 6.58079553498174e-05 3.90706298563263e-05 0.000459456809083102 0.000383679264587045 0.000370165826075435 3.40174828754841e-05 6.31436507816371e-05 7.1976296098839e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 3e-131 475 97.51 0.0488741490661546 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-83 315 68.10 0.168964915342992 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 -0.0148602594801673 0.803029043356466 CTGCTCTAATTTTTAAGATTTCTTTCCTTCTACTAACCCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTATAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTAAGGTATGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGCCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGGTTTTTTCCTGTAATTGAGATCTAATCTTACTGCATTGTGGTCAGAAAAGATGCTTGGAATGATTTCTATTTTTTTTTAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGATGAAATGTCCTATAGATAGCAATTAGGTCTAACTGGTCTATTGTATCGTTTAAAGTTTGTGTTTCCTTGTTAATTTTCTGTTTAATTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGTGGCACTCCCGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGATCATCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAACACATGCAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCGTTGCCATTTACTTTATTGTTTTGGGTTTGAATTTATACACCCTTTTTGTGTTTCCTGTCCAGAGAATATCCTTTAGTATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGAAAAGCTTTTGATTTCTCCTTCATACTTGAATGAGATCCTTGCTGAGTACAATAATCTGGGCTGTAGGTTATTTTCTTTCACCATTTTAAGTATGTCTTGCCATTCCCTCCTGGCTTGAAAGGTTTTTATCGAAAGATCAGCTGTTATCCTTATGCGAATTCCCTTGTGTGTTATTTGTTGTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTTGTGTTTGATCTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCTCCTTGGGTTTATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCAACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACCCCTATGATTCGAATGTTGGAGCATTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTTTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCCTTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTCATTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTGATTTCAAGATTTTGGATCAATTTCACTATCATTATTCAGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGAGCATTTATCCTGTTCCTTTATCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTAAATTTCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCGCTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGGACGCTTGTGTTGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTAGAGTGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATTAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTCCAGTTATTGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATCGATAAAACATCTACGTTAAAGATGAAAAGTTTCTCTACCGTGAGGGTCACCCAGAGAGGTTCACCGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAATCACTTCCTCATGTGCACTCCACAACTGGACCTCTCAGAGATGTTCACGGAGTTATACAGAGAAGAGAAGAAGGAGGAAGGAGACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAACTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGAGTCCAAAGGGAGAGAGAGCAGTTAAGCCAGTAATCTCATTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTTTGGAATTTCAAAAATATGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAAAATGAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAATATAGGTACAAAATTGATAACTAATACCAAAAAGCAAAAGTTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTAAAAAAAAGAAGATGAAAAAGAAAGAGAGAAAAACAAAAAACAAAACCAATGTCACAAAAATTATAAAGAAAATACAGGTACAAAATTGATATCAAATACCTAAAAGCATAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGGGGAAAAAAAGTCACAGAAATTATAAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGCTAAAGAAAAGAAAAAAAAAAACAAGGTCAAAAAATTATAAAAATATATATATATATGAAGTTTGCTGAAGAAAAAAAAATAGGGTCTTTTTTTTGTGCAAAGTAATAGGTTATAAAAGTGAAAATTAAAGGAATAATAGAGGACTTAAATTTTTTTTTAATTAAAAAAGAAAGAAAGAAAAAATGATCATAAAAGTAGTAAAAATATATCGAGGACTTTCTCTGGTTTTGTTGTGAGTATTGTGGGTTCAGCTCATTTTTGGCTAATTCCTTGGTCCGATTTATATTTCTCGAGATCTATAGGCCCCTTCCTATGTAGTCGGTAGTAACCACAGGGTTTTAATCTATTGCCTGTAGCTTCCAAGGCAGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGGTTTCCACCCTGACACAAAGAGGATGGTGGAGGACACTTTTTTTTTTTTAGGCTCACTTGTTCAGTTGCGCAGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCACAGTGCCTCAGCCACACTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGTTCCGCCGGGAACCATCCATGGCCAGCCCTGGGCTGCCTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCCCTCGGGTAGTCCTCAGAGGCACAGACTCAGCTGGGCCTGCATTTTGTGCCCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTAAGCGAGCACGATTGCTGCGACTTATCACCTCCCCGCCACTTGGTTATCTAGGTGTACAACCGGCGCACCTTCTCAGGCAGATGTTAACCATCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGAGATTGCCCCCTTCCAGCTCTGGCTGCGTGTCACCCGAAGGGGAAGGTCTGCAGCCGGCTATCTCTGTTTAGTCCTTTGTTCTGTGCGTGGGCCTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGTGTGGTAGATATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCACTCAGATAGCGCTCAGGGTATTCAGGCCAGGTCCTTACTCTAAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCCGCTTGCTAACGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGCAATCTGCGAGTTTTAATTGTTTATTTATTTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTTGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGACTCCCTTCCCGGGACAGAACTCCATCCCTCCCTCTTTTGTCTCTTATTTTGTCTTTTATATTTTTTTCCTACCTCCTTTCGAAGACTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCTGGCATTCAGAAGTTGTTTTGTGGAATTTACTCAGCATTTAAATGCTTTTTTTGATGAATTTGTGGGGGAGAAAGTGTTCTCCCCATCCTACTCCTCCGCCATCTTGGCTTCTCCCCCTTTAACAGTTTTATTTCAAGCCAACACCTGAGGCAAATATAAGGGATAAGGGATGAGGTCTTAAAAGTTGATCATGTGCTGTAGTAGGTACATATGTTGCCTTCAGCCTACCTCCTTCTTTGGAAACAGCCTCTCCTGACCTTCTTTTTCTACATTATTGTTTCCAGCCTGTCTTCTTTCACAGTACTAATTGGACCAGGTGTGGATCACTGAGCCAAGAAATTCAATCAGTGTTCACCTGGAGAAACAGAACTGAAGGAAGCGGACCTGGACCTGGGGCACAGAGGTGTCAGCATGTTCAAACACAAGCAAGTCAAAGTTACTGTCAATAGGAGAACGATCTAATCTCTGTCCTGCCCATGCACTACCAACAATCCTAAACCTACTATATCTACCAGAACAAAGAGGAATCGGATACCAAGACGGTCTTAACGCTGGATCCACTGCTTTGATTTTAGCAACTTCGGGGAAGAACTTAACCCTGATTCCTCTCTCTAAAGAAAAAGAAAAAAAAGAAAATGAAGAAGAAAATCCTGACTT TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178422 TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178503 EMBV3_12958 GTCTACACAGGAAGCTGGAAAGATGACAAGGGTGGAAGGTGAAGGACAATATACTGATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12016 GACTCACTGTCAGAGGAACTCTTGAATCATCTTGGTCAACCCCTGGATTCATCGGATGGG Gene BVT0102_108160 + 0 NULL GK000015.2:59004198-59164518 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09973 CCGGAATGTTTGATGGATGTACTACTGGCTGTCCTTCTCTCTTACCGATTCTGGAGCCAG Gene GeneID:526726|SDR16C5:XM_002692656:84_cdna Constitutive 0 NULL GeneID:526726 14 GENE SDR16C5 NULL short chain dehydrogenase/reductase family 16C, member 5 EMBV3_29947 TCTGGCCAAAACAGCAGTGTTCGGGGAAGAGGGATTACCCGCTTACTAGAGAGCATCTCC Gene GeneID:541073|MAEL:NM_001038193:38_cdna Constitutive 0 NULL GeneID:541073 3 GENE MAEL MGC134223 maelstrom homolog (Drosophila) EMBV3_43182 CCGCCCTGGGGCTCATTCTGATAGGCTACATGCTCATCACGGTCATCTTTATCAGTAGCA Gene GeneID:614821|LOC614821:XM_002696079:24_cdna Constitutive 0 NULL GeneID:614821 19 GENE LOC614821 NULL Ig-like V-type domain-containing protein ENSP00000329499 homolog EMBV3_31011 GATAATGAGTGAGAAATGTCTAGAATTAAAAAGGCATGCATCTCCAGAACTTGGAGGCAG Gene BVT0101_028313 + 0 NULL GK000011.2:84545626-84628304 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26393 TGCTGGCTAGAGGTTGTCTGTGCTTTCCTGTCCTAATGCATGTTATTTTTACATGAATGG Gene BVV0101_004604 + 0 NULL GK000009.2:48775167-49070183 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07529 ACTAGTGAAGAGAAGCACAGGACACATGCAGGGCTCCCCGATGAAGATGGATGGCAGGAC Variant GeneID:617456|HJURP:XM_002686557:44_cdna 474^575 2 EMBV3_41248 GeneID:617456 3 GENE HJURP NULL Holliday junction recognition protein EMBV3_25179 ATGGCCCACACTGGGTGCATGCTGCGACTCTCCTTCTGTGATGGAAACATCATCAATCAC Gene GeneID:790885|LOC790885:XM_002699114:163_cdna Constitutive 0 NULL GeneID:790885 29 GENE LOC790885 NULL similar to olfactory receptor Olr1214 EMBV3_41311 ATCTGAGGGCCAGATCGTGACCCCATAAAGGCTCAAGGAGAAAGACGAACACCAGTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25148 GGCTCAGTATCCTCACGCGGGGGCGCTGTGGCCGGGTCTCGCGGAGGTGGGGCAGGGACT Gene BVT0101_029057 + 0 NULL GK000007.2:97436845-97470513 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214669 1 XLOC_130742 Coding TCONS_00214669 XLOC_130742 Coding Coding RFESD 7:97463067-97473473 j TSS160501 1037 1 TCONS_00214669_1 158 4 0.900720807304181 6.23634279529154e-09 4.66261640773025e-09 3.99505223247302e-09 3.41738724525301e-09 7.02495499101729e-05 5.86381357537229e-05 2.4108163757799e-09 2.61933980816334e-09 0 0 0 0 0 5.44258771400063e-05 1.90494098668832e-09 1.19369580451673e-08 0.00023367410751346 0.00194763839233566 5.19677757791544e-05 0 1.57597524239891e-09 0.000106812375097641 0.00076080770031058 0.00045257369170203 3.07959621756952e-09 3.64149739509432e-09 2.57553263587235e-09 7.09836166946592e-05 0 4.37959910926568e-05 XM_003582492.2 RFESD PREDICTED: Bos taurus Rieske (Fe-S) domain containing (RFESD), 0.0 1871 100.00 0.999035679845709 NM_001131065.1 RFESD Homo sapiens Rieske (Fe-S) domain containing (RFESD), transcript 0.0 895 81.71 0.881388621022179 TCONS_00214669_1 sp|Q8TAC1|RFESD_HUMAN RFESD_HUMAN Rieske domain-containing protein; 2e-97 282 85.99 0.987341772151899 2 noncoding 0 0 0 0 -0.111974013033542 0.515808761950361 0.0154145495100315 0.777304243116415 CCCCGCCCCGCCCCGTCACGCGGAGAGCCACGCGGCCGCCGGCTTCCCGGCCGGCTCAGTATCCTCACGCGGGGGCGCTGTGGCCGGGTCTCGCGGAGGTGGGGCAGGGACTCCGGGGAAGCATGGATCCTGGTGGCTCTGAACAAGATCCTGAAATGAAGGAGCAATATGCTTCTGTCTATGTGGGTAGAGAAGAAGACATTAAAAGATCTGAAAGAATAACAGCTGTTGTCCATGACAGAGAAGTGGTGATTTTCTACCACAAAGGAGAATTTCATGCTATGGATATTCGCTGTTACCACTCAGGAGGACCTTTACATTTGGGAGAAATAGAGGAATTTGATGGACGAGCATGTATAGTTTGCCCCTGGCATAAGTACAAAATTACTTTGGAAACAGGAGAAGGACTGTATCAGTCTATAGATCCTAAAGACCCATCAGCAAAACCCATGTGGTGCTCCAAAGGAATAAAGCAAAGGATTCACACAGTGACAGTGGACAATGGGAATATTTATGTGACTCTTTCTAATGAGCCTTTTAAGTGTGACTCTGACTATTATGCTACTGGAATCTTCAAAGTAATTCCGAGTTCCTTCTGATAAAACTTAATGGCAATGAAAAATGTTGTGTATGTTTCGAAAGTAGTTTTAGAATAACCTTGCTGAGTACCAAAGATGACTAACTTTTTCTAACACAAGCACGTTTTTCATCTTTAACAGTCATATTTATGAAAGGTTCCAAAGCACATGTACTTAGTGTGATGTAAGGATCATCATCGGGATCTATAGAATACTTTTCAGCCAATCCTCTGGATTGATTGGAACCTCAAGGTTATAGGTTTGAAATGTGCATTTGAAGAAGGATAAAAATAATTTGGAGTAACCAGAGTGAAGAAAAGGTTAAAAAAAATTAGATCTACAAAGAAAAATTTAGGGGAAAAATCCCTACTTGATATAGTAGACTTTATCATGGAAAAAATTTAATGTATACAAAGTGAAGAGAATAATAAACTCCCAGCACCCACCTTCAACAGTCAC EMBV3_26086 CCCCCGAGCGTGGGGCAGGTTTGCATATTTATTTGTCTGTTCGTTAGGCTTCTGTGTCTG Gene GeneID:506632|KLHL21:NM_001076811:67_cdna Constitutive 0 NULL GeneID:506632 16 GENE KLHL21 MGC142436 kelch-like 21 (Drosophila) EMBV3_15987 TCCTGCCCTGTTCTGTGGGCACGAGGTCACTGAGGAACTTAAGGACTTGCATAGCGTTAG Gene GeneID:508943|MAP3K3:XM_002696094:147_cdna UTR3_Alt 2 NULL GeneID:508943 19 GENE MAP3K3 NULL mitogen-activated protein kinase kinase kinase 3 EMBV3_22420 CTTCACCGGGAAAGATTTGCTCAGATAAAGGCTAAGCTGAGGGTCGCCCTGGACACAGAA Gene GeneID:100336475|LOC100336475:XM_002699029:2_cdna Constitutive 0 NULL GeneID:100336475 29 GENE LOC100336475 NULL PRAMEF8 protein-like EMBV3_32576 TTCCCGCGAGCAGTTCACCGCGGCGTCCGGGACGATTTATTCTGCTATTGGCATTGATCT Variant GeneID:282311|PLA2G7:NM_174578:213_cdna 312^815 2 EMBV3_24360 GeneID:282311 23 GENE PLA2G7 NULL phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) EMBV3_36764 ACTTCTCAAGAGGAATGTGAAGGCCTACTGTGTGCAAGACCCTGCTCTGGGCTGAGATCT Gene BVV0102_242711 + 0 NULL GK000007.2:45032847-45033879 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29609 GTGGATATAATCTGAACGTCTGTCAATCACTACTTATCTGGGCAACCTGGCTTAAGAAGC Gene BVV0102_343996 + 0 NULL GK000014.2:21245524-21456451 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051507 1 XLOC_031207 Coding TCONS_00051507 XLOC_031207 Coding Coding UBE2V2 14:21225142-21249385 j TSS38388 2002 1 TCONS_00051507_1 145 0.150849150849151 6 0.917663559112284 0.000271574104202211 0.00139201283061318 0.000367169113826202 2.71657589853082e-05 4.77950237113792e-05 5.78459017069422e-05 6.93940951759046e-05 0.000336650425397607 8.40149399142616e-05 0.000212683794448788 6.62758016003937e-05 0.000122523405551931 2.03660751767485e-06 0.000360438190986597 7.7515391247948e-06 0.00202214021843501 0.000351953687039918 0.00119233635213242 0.000125334196095589 0.000514430235404021 5.73886151773458e-05 0.000425762390690604 0.000251036134299757 0.000364430095771676 0.000305223249388504 9.04787716208167e-05 0.000269346619927649 3.46144891117654e-05 0.000125557666543473 0.000464692243898372 XR_232702.1 LOC101902364 PREDICTED: Bos taurus uncharacterized LOC101902364 (LOC101902364), 0.0 1575 100.00 0.435564435564436 NM_003350.2 UBE2V2 Homo sapiens ubiquitin-conjugating enzyme E2 variant 2 (UBE2V2), 0.0 1104 88.64 0.431568431568432 TCONS_00051507_1 sp|Q3SZ43|UB2V2_BOVIN UB2V2_BOVIN Ubiquitin-conjugating enzyme E2 variant 2; 6e-104 298 100.00 0.993103448275862 1 noncoding 0 0 0 0 -0.162824318536133 0.304044959624915 -0.039870237894173 0.495731916187146 AGCGGCTGCGTCTCAGGAAGTCGGAAGCCGCGGGGCGGGCCCGCGGTGACACACCGGAAGCCGAGGAGAGGGAGCCGGGAGCCGGAAGCCGCGGGGCGGGCGGTGGCGCTCCCGGAAGTGGCGCGGACGTCGCGTGCGTCTGAGCGGTGCGTCGGGCTGCAGGAGAAGATGGCGGTCTCCACAGGTGTTAAAGTTCCTCGTAATTTTCGTTTGTTGGAAGAACTTGAAGAAGGACAGAAAGGAGTGGGCGACGGTACGGTCAGCTGGGGCCTGGAAGATGATGAAGACATGACACTCACAAGGTGGACAGGCATGATCATTGGGCCACCACGGACAAATTACGAAAACAGAATATATAGCCTGAAAGTAGAATGTGGACCTAAATACCCAGAAGCTCCTCCATCAGTTAGATTTGTAACCAAAATTAATATGAATGGAATAAATAATTCCAGTGGAATGGTGGATGCACGAAGCATACCAGTGTTAGCAAAATGGCAAAATTCATATAGCATTAAAGTTGTACTTCAAGAGCTAAGACGTCTAATGATGTCCAAAGAAAATATGAAGCTTCCACAGCCACCAGAAGGACAAACATACAACAATTAATTTTAGTGGATCTCAAACTTGTCTTAAATCAGCAACCTTCTACTCATGTTAATGTCTTGATTAAATATCACAATGCAAAATACCCACACATTAAAGTAAGATAATTCCAGCTGGTAAACATGACCTGGACGTTTGTAAGAATATATTTAATATATGTACACCCATTATGTTTTCAGGTAACAGGAAGAAAATTCAGCAGTCTTTTCTTGTTAAGGCACCACCACTTAAGCACGCACCTGGAGTCCTCACTGGAGCTCAGGTTTGCAGGTGAGAGCACAGCAAGAAGTGTCGGCTGGCTGTGCAGGCAGGTGTGTTTCTGACGAGAAAGCCGAGAAGGAAACTCGAGTGGTGTGCTCCATCATCTTGCTTAGAGAAAGAGCTTCAGTTGAAATTGTCTAAAGTAGCAGTCTGAAGATCTGTACAAGATTTTATCTTCAAGTTCATTTGTGAAGTCGGTGATTAAAGCCAGATGGATTTCACTTCTTAGAGTCCAGGAATTGTCCTCCCTCCAGTGGTGACTGACCAGGCACTTAACAGTAGATAACTTTTCCAAGTAATCTGAAGATTAACCATCTAACGTAAAGTGAGGTTTTGACATGACACCTGCATTAGAATGTAAAGTTGGTACAGTACTTACGGTCATGTTTTTGGGTCTGAAGACTCACTGTCTTTCAGTCAACAAACCTGGTCATTGTGAACGCTGTATTACACAGGGCGGAGTCTTATGGCCTGTGTGGTTTGTCCTTAACATGAGAGAAGAGTAGATTCTCTCCACAGTTGATAATTGATAAAGAGAAATGTCTGACTGCTTCTTAAGCCAGGTTGCCCAGATAAGTAGTGATTGACAGACGTTCAGATTATATCCACTAACATAGATTATCTTTTTACTGCTATAATTGAAAAAATCATCTGAATACCCAAGTGAAAAAATTGAGTTCACAAGAAAAGTGCAGTATCTAATTGCCTGGGTTTCTTTACCTTGAGTAACATGTGGACTTCCTTAAGGAAAAAAATAATTCTTTTGGACTCAATATTGTCTTGAATTATTTTTGTTAAAATATTGTTTAATGCATAAAACTGTGTTAATGCAAATGTATATACTTCTTAGTCCTATAAAATTATAAAGCCCAATAAAATTATAAAAGTTACACAGTAATTAAAATGTAAAAGACTTTAATACTGAAAATGTTTTATTGAATTAATCTCTACTTGAAATGTAAATATTGTCTCTCCTTGGCTTTCTGTTGTTGTCATGTCTATACTATGTGCTGCTGGACCTTAGTTTTTTTTTGTTTCTCTTTATCTTTTTTTCTCTTGCCATACTGGTACAAAAAAACCTTTTTTCTGTTGTCTGACCTTCATTTGATACACACACACTTCTGCATTAAGTCCCCCT EMBV3_10804 GCCAGATGCTCACTCATGCTGCTGGTTTCGGGTCACACTTCGAGAATCACAGAAAACTGA Gene BVV0102_210307 - 1 EMBV3_20818 GK000015.2:39367000-39529626 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02582 AGAGTTCATTTGAATGGGAGAAGGCAAGAGAGGTGGCTGCAGCCTTCACAGAGCAGATCT Variant GeneID:530315|EGF:XM_002688103:182_cdna 326^527 1 EMBV3_29115 GeneID:530315 6 GENE EGF NULL epidermal growth factor (beta-urogastrone) EMBV3_07082 ACCTACGAGGACTATGTCGAAGGCCTTCGGGTGGGAGATTGTGTATGTAGCCCGGACGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30789 GACAACTTACAGGTGTATGGTTTGAAATACCACAAAGTGGCCACATATAACCAGCACCAG Gene BVT0102_177901 + 0 NULL GK000022.2:7024066-7045914 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127867 TCONS_00127865 TCONS_00127864 TCONS_00127863 TCONS_00127866 1 XLOC_077770 Coding TCONS_00127864 XLOC_077770 Coding Coding CMTM6 22:7000109-7045851 j TSS95552 5909 2 TCONS_00127864_2 144 0.25672702656964 5 0.87092542795304 0.000135997473202085 1.5266578293948e-34 0.000293158596115872 0.000579425315914317 0.00186521070546513 0.00014049104033077 0.000308174759500863 0.000156865643680567 0.00119391622913127 3.18833576103658e-06 1.95992798992842e-27 4.724203069934e-304 6.43019216479513e-118 2.68569756637515e-05 7.99719865614375e-05 0.000273357543897591 0.000686981905794835 0.00121006427440044 9.06110091061503e-07 1.73625070058064e-09 0.000185831959916375 0.000516279723489613 0.000199154581354868 0.000326604871933919 0.00021482763397178 0.000580763027414144 0.000362343343119703 9.67735018573644e-25 2.33156165787442e-13 0.000471574217951556 NM_001035066.1 CMTM6 Bos taurus CKLF-like MARVEL transmembrane domain containing 6 (CMTM6), mRNA. 0.0 4821 99.85 0.454053139279066 NM_017801.2 CMTM6 Homo sapiens CKLF-like MARVEL transmembrane domain containing 6 (CMTM6), mRNA. 5e-141 508 67.09 0.24775765781012 TCONS_00127864_2 sp|Q9NX76|CKLF6_HUMAN CKLF6_HUMAN CKLF-like MARVEL transmembrane domain-containing protein 6; 5e-61 190 73.48 0.909722222222222 0 coding 0 0 0 0 0.0973072867151918 0.38198452521468 -0.00436762527534884 0.925482282781871 AAGATCTGTCAGTATTTTATTTAACTTCATAGGATTATTAAGCTTTCAACTCTTCTAAGAGACAGGTAAGTACCTGAGATTACTGCCCTGTAAGTCTCCTTAAATTAGGAATTTACCTTGATCAGTACATCTTCCCTATCAGCATGTCTTGAACTATCAAATCTAATGTCAGCCTTCCTCACAGAAACAAATAAAGCCTTCTTTTAGTCATCCTTTAATGGGCAGAAGCTGTTTTAAGAGTTTGGCGCGTTCACACGGCTGCTCTTCCCGGCCCTTCCAGGTCAGGTCACCTGGTGGTGGTTTCCGCTTTGGAACATTGGTAGCGACAGTTAGATTTTCATACTGATGTCAGCTAAAGGGCGTACGTGCATTTGACCTGTTGCTTAATTTCAGATCATTGAGGGGAAACGGTTACTGCTGTTTACATCGGTCTTTGTTATAACTTTATAATATATATTCCTAAGATGTTTTTTCCACAAAATGTTTGAGGGCAGTTCTTCTACTTTCAAACGTAATTCTTTCATTATAACTTTAAAATCTGTTTAGTTTAGTTTTATAGTAGTGTTTGGCTCCTAATGGTTGAATGTAAATACTAAAATATATGAGAGGGTTATAATTTGTTTCAGTGTGGGAAAAACTTAGGGTGTTTGTGGGCATGGAAAAATTAGTTTGCAAAAGCATTTTGTTTGATAAAATGAGGGGGCAAATGCCGTTGATAAAATCTTAACGATTCTGCAGTTCTGGTGTTGTGAAGGCCGGTTTGCCTAAACTAGTTGTACTTGAAGTAAGTGAAGCCGCTGAAGAGAATTGCAGACCGTGCTTCGTGGTATACTGTGGCATGTCTGCTGTGTTGCATGTCTAGACTAACTCATGGTTTTTTGTTTTTTTTTCCTGTGTACATTGGAGATATACTAGAAAACCCTCAGAATTGCTTTGTTACCTGAATTAATGATAACTGTTCACTTTATATGAGGTTCAGTTTTAACTAATTGAAGATCTTTTGTTTACTGTGGTTGGACTTTAAACCTTTTTTGGTCCCAATTTTAGCAAGGAAATTTGTTTTTAAACTACTTAAATTTTTTTGTTTTTTAGCTCTTTTTAATTGAAGTACACAGTACAGAAAAGTAGACAACTTACAGGTGTATGGTTTGAAATACCACAAAGTGACCACATATAACCAGCACCAGCATCAAGAAAGACAACGTTACTGCTTCTAGAGGCTGCCTGATTTCCTTGGTTCCTGGCCCCCTGTCCATCTTCAAAGGCAACAGCGTTGCATCTTCTAGTCTCTGCTCCCAGCACACCGCTTCACCCTGACCCTGCTGCTTCTGCATATCAGGATCCATGGGATTAAATCTGGCCCACGTGCTGTCTCTCCTGGCCTTCATCTGTGAGGAGGTTGTGTCGCAGTGCACTTTGTGTGGAGGACTCTACTTCTTTGAGTTTGTCAGCTGCAGCGCCTTTCTGCTGAGTCTGCTTATCTTGGTTGTGTACTGCACACCAGTGTACGACAGAGTCGATCCCGCGAAAGTCAAGTCATCGGACTTTTTTATCACTCTGGGCACAGGACTGGTGTTCTTTGTGGCATCCCTCACTTTCACTTTGACACATGACAATACCATAGCTGAAATTGCTGCAATCGTGTTTGGGATGTTAGCAAGTCTTACATACCTGGCTGAGTTCTCCTTTATGCTCCGTGAAAAACTTAAAGAGCCCCGGCCGAGAAAAGGGGAGGCCACCATGAGGAGAGAGCACCTCACCGAGCCTCTGAATGCTTGAGGGGACGGGTGCGCGAGGTTGCCGCGGGGCGCGGCAGCTCCTGTAGACCCTGGGTCCGTGTTAAACCGCTGATTTTTGGAGAGCAAGGCAGGACGGCAGTTTGATCAGTATTGATTGGACTGTGTATCAGTCACCATAAATAAGGCCAGAGGGCTTTAAAAAATTTTTTTTGTAACAGTTGAAACTTGTGTCAGATGAAGTTTTGTTTGGAGGTAAGAGCAGCTGTGTCTTTAAATCACATAGCTCAACTGATGATAAATTATTCCATCATTGTTACTAGGGTTAGGTTTGAAATTATGCTTTATAGCTGTATAAACAGCGTGATGAAGTTCATCCATTTATAAATGGTTTCACTTTTAATTTGCTTAGCTGTGACTTTGCTTTTTGATGACTAGATACAGTTTAATGTATATTTGAGATATTATTTTAAATGTTGGTCTACGTTTTTCCCTTACACATGTAAAACCCAGGCTTTTACCATATCTCACTCTGCCTTAAAATTATACTGTAACGTTTTAGGATATAATTATTAACTCTTTCTGAGACCTTTTATAGCCTAATAGAAAATGTATGGGAGATGCTGATATTTTACATGTTATAAAAGCAACAATGTCAGCAACCCCATGTAAAAGTACACATAGAAAAACGGAAGAAGCCGCTACCCTAAGGACCAAAGATCCGCGTTTGCACAGTGCAGTTCTTCACCACTGTTCAGTGTCTGAAGAGATGAGTTCATTCCATGAGACAGAAGATGGTTCACTCCTTTTTGCCATATGATTATTTCTCCTGAAATTAAGGTTCTGTTCAGTGTTTTCTTGGGAGCCCATCTTACTTTAAAACCTCAACCTTTGATTTTTGATTTGAGAGCTTCCCCGCTCTGTCTCCTTACCAGGATGGGCCAGGTACTGCTCCAGCAGCCGGCAGAGGTGGGCCTGGGGCTCTGGCTGCTCGATGGCAGCTTCTTCAGATTCTCAGGCCTGTCCAATTGCAGAGACTCACAGCAGGATCTTTAGGGTTCTTGTTCCCACACAGATGTTGCCCTAGTTTCTCTTCAGAGGAGACCTTAAGGAAGGGAGTGCCGAGACACCTGCCCAGCTCAGTACTGTTGATGGTGGAAGAGAGTGCCAGCCCACCCTCAGGGGAACTTCACAACCAGCTGTAATCGAAGAACTGTTTGCTGCCAGCAGGCTAACTTAGAGCCAGCCAGGGCACTTTGAATGAGACCGTTCTTAAGGGAGGTCTTTTTATAACGGGACCTTTCTAACCAGGTGCTTCCCAGGCTAGACCTTGCTTGTCCTCTCGTGGGGAGTTTTCACTTGACTCCAGCGTGGACTCTCGTTGCCGGTGAGATAGGCTAATGACCCCATCCTTAATCTCATCTGCCGCTGTGTCATGGATGGTTTCAGACAGATGCCCAGACACAAGCTCTGCTGTCTTCCTGATGCAGACCCTTATCCGTTTGTGGCAGTTTGGTTGCTAGTGGCAACGTCACCACTGCCTGCTCGAGAGATCGTGCAACCAGTCGAGGATGCTCTGTGTGTGTTCACAGGGTGTGCTAAATAAGGAAGGAGAACTGGTGTAGGTCTAACCCAGGTTCACAGAGAACCAGCTTGTGGAAGGTAGGTGCCGTGGTCCTTGTATCACCTCTGCCCAGCTGGCACTTGCGGCAGACCATCTGGGCGCCCTCAGGGTCCCCGCTTGGGAGGTTGAGGGAATGGCCTCAGCGGGCCGGTGCGGAGCTTAAGCTCTCCTTGTCCCGAGGTTTCACTTCGCTTGTTTCACTGGCACAGAATGGAGCTCCTGGCTGGCCACCAAAAGATACTACTTTCACGGGTATTTCAGGTCATCCTAGAACCTTTCTTCACTTTTTTTTTTTAAACAGGACCCACGACTAATTAGCCTCCATCTGCTTTGGTAGGAGTTAGAAGTAAAAAGATCTTTGTGGTCAATAAAAATTCAAGGAGAACTTGAAACCAAAGCCACTGTTACAGAAAAGGGCAAACTCAAATGTAAATTAATTTCTTATTAATGGTTATGGTAAATTTATGTAAGTAGACCTTTGAGAACAGTTCTTTTAAAAGGGAAGTGTGCATACAGTGCAGATTTTATAATTGCTGTACTTAAATTATGTTCTGATGGGGGCTGGGGAATGTATTTTTACAGTGTTTATAGCCAATCAGTTTATATTTAATAATTTTAAATCCTGTGGGTCTTTTGTGTCTCTGTGTCAAATTTTATAGTCTTTCTAAATAAATCGACTTCACTGTTTACACCTTTGTAGTTGTTTATTTATTACAGAAGCATAGTGTTTAAATGAATGTGTTCTCCAGACTTCTAGGAGTTGGTTTTACAACCTGGGAGAGAATACTGGACTTTGGATCTGCCAGGGCGTGGGCAGGGAAAACCATGTCCACCTGTGGGCTCTCCCTCTTGGAGAGCTAGAACACACATTCAAACCACATCTCTAGGGAACCACGTGTGAAGAGTTACAAAAGAATGTTGTGAACTAAAGGCCTTCAAATACTTCCAAAGCAGCAAATTTGGACTCAGTCCCGTTTCCTAGTATGGGTAACAGTCCCCCAAACAAGCTCATTCTCGTTCAGGCTGTTCAGTGACTGGGAAAGTGAAGCAAAACTAGGATGGTTCTGGTAAAGCTACAGGTATTCGTGTAGTTTGCAAAATTCCTGCCTCCAGACGTATGAGAATAACAAGATCTTTAGAGTCATCACGAACTCACTGGAATTTGTACATTCTTCAGACCTCTGTGTTTTGATAAAGAGCATGATTTTATCAGCATACAATCAACTACAAGGAGCAGAATATCTAACTAGGTGGGTCTTAAAACACTTAGAAAGTGAAAGTCACTCAAAAAGAGTGTCCGACTCTTGGCGACGCCATGGACTACACAGTCCGTGGAATTCTCCAGGCCAGAATACTGGAGTGGATAGCCCTTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGACTGAACCCAGGTCTCCTGCATTGCAGGCTGATTCTTTACTGACTGAGCTACGAGGGAAGGCCTAAAACACTTCAGCACTAAGGAAAATTTATTTCACGAGAAGGCTGGGTGGTTCAGTTCCACAGGTGATAAACTGAGTGGCCGAGGAGTGTCGCCAGGGACCCGTGCTCTTTCCATGTTTTCCTGCCCATCCTTCTGTTTCTGTCCTCTGGGTTGACTCTCTGGCTGCCCGGGCGCAGGAGGGCCTAGACGAGCTACTCCATGTTCAAGGTCAGGAGGGGCAGCGGTGAGGAGATACCCCTCGTCCAAGGAAAGGAGCAGAGGCTGCGCTTTGCTGGAGCAGCTGTGAAGAGATAACCCACGTCCAAGGTAAGAGAAACCCAAGTAAGACGGTAGGTGTTGGAAGGGCATCAGAGGGCAGACACACTGAAACCATACTCACAGAAAACTAGTCAATCTGATCACACGGACCAGAGCCTTGTCTAACTCAATGAAACTAAGCCATGCCATGTGGGGCCACCCAAGACGAGCGGGTCATGATGGAGAGATCTTACAGAACGTGGTCCACTGGAGAAGGGAATGGCAAACCACTTCAGTAGTCTTGGCTTGAGAACCCCATGAACAGTATGAAAAGGCAAAATGATAGGATACTGAAAGAGAAACTCCCCAGGTCAGTAGGTGCCCAATATACTACTGGAGATCAGGGAACAAATCACTCCAGAAAGAATGAAGGGATGGAGCCAAAGCAAAAACAACACCCAGTTGTGGATGTGACTGATAATAGAAGCAAGGCCCGATGCTGTAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACGAGATGGCAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTAAAATGGACTGGAATGGGTGAATTTAACTCAGACAACCATTATATCTACTACTGAGGGCAGGAATCCCTCAGAAGAAATAGAGTAGCCATCATGGTCAACAAGAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATAATCTCTGTTCGTTTCCAAGGCAAACCATTTAATATCACAGTAATCCAAGTCTACGCCCCAACCAGTAACACTGAAGA EMBV3_20551 TGACAGTGTCTCAGGCTCTTCGGAGTTGCTCCAGAGTCTATATTCACCTCCCACATGCCA Gene GeneID:508637|SUSD4:NM_001101904:32_cdna UTR3_Alt 2 NULL GeneID:508637 16 GENE SUSD4 MGC143199 sushi domain containing 4 EMBV3_27137 TCACTCCTTGTGTTCTCCATCAAGTCTGAGGTCTGAGCAGCACCCTTACCCCGACCACAT Gene BVV0102_249832 + 1 EMBV3_34868 GK000029.2:5671556-5683522 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164438 TCONS_00164439 TCONS_00162932 2 XLOC_100223 XLOC_099766 Coding TCONS_00164439 XLOC_100223 NonCoding Coding - 29:5672353-5673043 - TSS123042 204 3 0.708272859216255 0 0 0 0.00035275126943973 0.000108907141098658 0.000235009033413564 0.000339669692004203 0.00101009864859744 0.00150774729280714 7.30957840288906e-17 2.25662640128123e-09 0.000776934055344967 2.23408704026483e-08 0.00947588399797099 0.00793908432200746 0 0 0 0 0 0 1.8130425858456e-05 5.32463889620547e-05 0.000321520416170036 0 0 0 7.08052010378395e-05 0 0 XM_609030.6 LOC530556 PREDICTED: Bos taurus preferentially expressed antigen in melanoma-like (LOC530556), transcript variant X2, mRNA. 3e-30 134 98.70 0.372549019607843 0 noncoding ACGCAGAAACTTCTCGCTCTGGAGTCACTCCTTGTGTTCTCCATCAAGTCTGAGGTCTGAGCAGCATCCCTACCCCGACCACATCAGACCTGGGTTTCCATCTGGCCCAACTGGAATCTTCTATGATCTAGCATTGCAGAAATGAAGAAGTGGACATTTTAGGGTATATTCAGTATATATTTGGATTTTTCTTCTAAATATTTC TCONS_00164437 s 3' 314 TCONS_00164437 TCONS_00164437 s 5' 0 EMBV3_32998 TCAGGAGACTGGCTACCACTAGGGGCATGGAAGGGAGAGGTAAATAAAACAGGTCAGTGA Gene BVT0101_061286 + 1 EMBV3_36304 GK000008.2:39940911-40047896 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31548 CACGCCATGATGGAAAGGAAGTTGATGAAGGTGATTCTCATCTAAATGTTCAAGTTAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14912 GTGGCAGCACTTCTATCGTCTCTTCACTTATCAGCATAATACTGTAGAAAGTGTACAGCG Gene BVT0102_072715 + 0 NULL GK000029.2:46286002-46321876 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165608 TCONS_00165612 TCONS_00165604 TCONS_00165602 TCONS_00165605 TCONS_00165607 TCONS_00165603 TCONS_00165611 TCONS_00165606 TCONS_00165614 TCONS_00165610 TCONS_00165613 TCONS_00165609 1 XLOC_100573 Coding TCONS_00165606 XLOC_100573 Coding Coding SUV420H1 29:46312996-46336800 j TSS123669 3628 1 TCONS_00165606_5 782 0.0118522601984564 9 0.847960341133471 0.000861118151773603 4.61254690634797e-21 0.000499167068126877 9.25496797988297e-25 0.000568158795937095 0.000250008415093593 9.78564466635186e-05 0.000244795115983153 0.00115038730168252 6.13285868056908e-28 1.93683812925693e-15 1.00116978670348e-27 0.000203656926275978 0.000708770163010676 0.000219963371630853 1.08931047821401e-17 2.68509747236469e-23 4.03024466650248e-25 0.0012919748932042 0.00172980125168706 0.000671344642787607 2.24834829363197e-12 4.75523789835619e-05 1.18324997507352e-32 0.00339518201996235 4.18391401346848e-27 0.000901016705672729 1.4097668883308e-22 7.57589971003232e-09 4.93195233109946e-18 XM_005227196.1 SUV420H1 PREDICTED: Bos taurus suppressor of variegation 4-20 homolog 1 (Drosophila) (SUV420H1), transcript variant X4, mRNA. 0.0 6359 100.00 0.971609702315325 NM_017635.3 SUV420H1 Homo sapiens suppressor of variegation 4-20 homolog 1 (Drosophila) (SUV420H1), transcript variant 1, mRNA. 0.0 4672 89.49 0.971609702315325 TCONS_00165606_5 sp|Q4FZB7|SV421_HUMAN SV421_HUMAN Histone-lysine N-methyltransferase SUV420H1; 0.0 1328 89.39 0.99616368286445 1 coding 0 0 1 0 -0.409124444036923 0.298835034030071 -0.0488215106303109 0.387913710513191 CTTTGAGGTGGGGCCTGAGAGTCTCCGTTTGTCACAAACTCCCAGTTACACTTGGGAAGCAAAGTCCCAAACCATCGAGCCTGCTGAGCCTTGTCGCCATGTGCGCCTTTCCTCCGAGGAGCTCAAGGCATTTTTCAAAATCTGACAGTTTTTCTCACAACAACCCTGTAAGATTTCGGCCTATTAAAGGAAGGCAGGAAGAACTCAAAGAAGTAATTGAACGTTTTAAGAAAGATGAGCACTTGGAGAAAGCCTTCAAATGTCTGACTTCAGGAGAATGGGCACGGCACTATTTTCTCAACAAGAACAAAATGCAGGAGAAATTATTCAAGGAACATGTATTTATTTATTTGCGAATGTTTGCAACTGACAGTGGATTTGAAATATTGCCTTGTAATAGATACTCTTCAGAACAAAATGGAGCCAAAATAGTTGCAACGAAAGAGTGGAAACGAAATGACAAAATAGAATTACTGGTGGGTTGTATTGCCGAACTTTCAGAAATTGAGGAGAACATGCTGCTTAGACATGGAGAAAACGACTTCAGTGTCATGTATTCCACAAGGAAAAACTGTGCTCAGCTCTGGCTTGGTCCTGCTGCATTTATAAACCATGATTGCAGACCTAACTGTAAGTTTGTGTCAACTGGTCGAGATACAGCATGTGTGAAGGCCCTAAGAGATATTGAACCTGGAGAAGAAATTTCTTGTTATTATGGAGATGGGTTTTTTGGAGAAAACAATGAGTTCTGCGAGTGTTACACTTGTGAAAGACGGGGAACTGGTGCTTTTAAATCCAGAGTGGGACTGCCTGCGCCTGCTCCTGTTATCAATAGCAAATACGGACTCAGAGAAACAGATAAACGTTTAAATAGGCTTAAAAAGTTAGGTGACAGCAGCAAAAACTCAGACAGTCAGTCTGTCAGCTCCAACACTGACGCAGACACCACTCAGGGAAGAAACGACGCAACTTCTAACCGAAAATCTTCAGTTGGTGTAAAAAAGAACAGCAAGAGCAGAACATTAACAAGGCAGTCTATGTCAAGAATTCCAGCTCCTCCCAACTCTACCTCATCTAAGCTAACTCCTATAAATAATTCCAGGGTACCAAAGAAACTGAAAAAACCTGCAAAGCCTTTACTATCAAAGATAAAATTAAGAAATCATTGCAAACGGCTGGAGCCGAAGAGTGCTTCTAGAAAACTCGAAATGGGAAACTTGGTACTGAAAGAGCCTAAAGTCGTTCTGTACAAAAATTTGCCCATTAAAAAAGAGAAGGAGCCAGAGGGACCAGTGGAGGCCACGGTGGCCAGTGGGTGCTTAACCAGACACGCTGCAAGAGAGCACAGACAGAACTCGGAGCGAGGCGCCCCTTCGCACGCGGAGGGCGCCCCCTGCGCCTACACAACCAGGCGGTCCATGAGGACGAGGATGACCTTGAAGGAGACCTCCGACATCAAGCTTGAACCAAATACGCTGGAGGGCTACAGAAGTGACTTGACAGAACCTTGCCCAGATGGCGGCGAGCAGCCCGCTCCCGGGGCGCCGGACGAAGAGCTGGCCCACGAAGCTGCACAGAAGGGGGAAGCCAGGTGTCCTAAGAGCGACAGCAGCACGTCCAAAAAGAAGTCACAGCCGGGGAAGCTGGTGCGGCAGCTGGCAAAGGCAGAGGAAGCCAGTCCCGTACACGAGTCCCCGGGCAGGGCCGGCGCGGGGCCAGAGGCGGCTGGGGCCCACCCCGACTCGGGCGAGCACAGCGGCGTGGAGGGCGTGCCCGGGGGCTACGCGGACTGGGCCCCTTCGCCCGTCAGTGCTTCCATGGTGACGTCAGAGAGCTTCAAAACAAAAGACGGCTTCCGAACTGCGAAAAGTAAAAAAAAGAGGCGGATCACGAGGTATGACGCACAGTTAATCCTGGAAAATAACTCCGGGATTCCCAAGTTGACTCTTCGCAGACGTCATGACAGCAGCAGCAAGGCAAATGACCAAGAGAGTGATGGGATGAATTCTTCAAAAATCAGCATCAAGTTGAGTAAAGACCATGAAAATGATAATAACCTCTATGTAGCAAAGCTTAACAATGGATTTAACTCAGGATCAGGCAGTAGTTCAACAAAATTAAAAATCCAGCTAAAGCGGGACGAGGAAAGTAGGGGGCCGTACGCAGAGGGGCTTCACGAAAACGGCGTGTGCTGTAGTGACCCCCTGTCCCTCCTGGAGTCACGTATGGAAGTGGATGACTACAGTCAGTACGAGGAGGAGAGCACAGACGACTCCTCCTCCTCGGAGGGAGAGGACGAGGACGAGGAGTATGACGATGACTTTGAAGACGATTTTATCCCTCTGCCTCCGGCCAAGCGGTTGAGGCTCATAGTTGGGAAAGACTCTATAGATATTGACATTTCTTCCAGGAGGAGAGAAGATCAGTCTTTGAGGCTTAACGCGTAATAAGCTCTTGGTCTTAACTTGACCCGGGATAACTACTTTAAAGAAATAAAAAATTCCAGTCAATTATTCCTCAACTGAAAACGTTTTAGTGGCAGCACTTCTATCGTCTCTTCACTTATCAGCATAATACTGTAGAAAGTGTACAGCGTACTGACTCTTCTTAAAAAAGTCTGATTTGTGCAAATTTTTATTGTACTTTTTAAATAGCCTTCTTATGTGCAATTCTAAGTTAGAGGTAAAGCCCTGTTGTAAAATAAAGGCTCAAGCAAAATTGTACAGTGATAGCAACTTTCCACACAGGACATTGAAACCAATAATGTGGCTACACAGTTTCTTTTTTTTTAACTTTAAAAGCATCAACTGGCTCTTTAATATATGACTAAACAATAATTTAAAACAAATCATAGCGGCAGCATATTAAGGTTTTCTAGTATATGCTAATATCACCAGCAATGATCTTTGGCTTTTTGATTTATTTGCTAGGTGTTTCCCCCTTGGAGTTTTGTCAGTTTCACACTGTTTGCTGGCCCAGGTGTACTGTTTGTGACCTTGGTTAAATAGCAGACCATTGGGTGGGAGTCAAATTGGTTTCTTTAAAAAAAAAAGTACAGTTACATGCGTGACAGCTAATTTTCAGTGCATTACATGTACAAGGATAGCAGTGCGCAGGGTGAGTTTCGATGCAGCGTATTTATTGCTTGTCATGTAAATTAAGACCTTGTATTTAACACTTTTCAATCCTTTTAGATAAAATTGTTCTTTGCAAGAATGATTGGTGCTTATTTTTTCAAAAAATTTGCTGTGAACAATGTGACTACAACAAGCAACATTTATCTAATGAACTACAGCTCTCTTAATTTGGGTCTTCGAGTTTTCTGTTGCACTTGTAAAATGCTACAAGGAATATTAAAAAAAAAACTATTCACTTTAACTTATAATAGTTTATGAAATAAAAACATGAGTCACAGCTTTTGTTCTGTGGTAACCTATAAAAATGTTCGTCTTTGAAATTCAGTGTAAAGAACTGAAAACAGTGTATATGTTGTAAATATTTGTGTTGTGAGAAATTTTTGTCATAAGAAATTAAAAGAACTTACCAGGAAGGTTTTTAAGTTTAGAAATATTCATGCCAATAAAATAGGAAATTATAAATATATAGTTTTAAGCACTGCATCAGTGGG EMBV3_28165 CCTCAGCCAAACGACTCTATGAGTAAGGGAAGTCAAGGACAAGAAGTGATCAGAAGGAGC Gene GeneID:281918|MRVI1:NM_174392:37_cdna Constitutive 0 NULL GeneID:281918 15 GENE MRVI1 IRAG murine retrovirus integration site 1 homolog EMBV3_24085 TTTCCAAATCTGCCCAGTCCTCAACTCCTGGCCCCCACCCAAGGCTAGGAAACCATATAA Gene GeneID:282355|SLC1A5:NM_174601:56_cdna Constitutive 0 NULL GeneID:282355 18 GENE SLC1A5 NULL solute carrier family 1 (neutral amino acid transporter), member 5 EMBV3_11609 GAAGTTCTCACTGGAGAAGCTACATCAAGGCATCACCGTCTCAGACCCTCCCTTCGACTC Gene GeneID:507027|GRAMD1A:XM_002694927:12_cdna Constitutive 1 NULL GeneID:507027 18 GENE GRAMD1A NULL GRAM domain containing 1A EMBV3_20322 AGTCGGTTGTGCTAAACTCTGGAATGAATGGTGTTTTATCACCTGAAATCGAATCCTTCG Variant GeneID:614817|PSMG1:NM_001076347:39_cdna 344^392 3 EMBV3_18420 GeneID:614817 1 GENE PSMG1 MGC140766 proteasome (prosome, macropain) assembly chaperone 1 EMBV3_33846 CCAGTGTTGCCTAGGAGAGCCATGCAATCAAACCAGTAATACCACCGCTTCTCCACATCA Gene GeneID:617425|MGC148293:NM_001082462:8_cdna UTR3_Alt 2 NULL GeneID:617425 7 GENE MGC148293 NULL similar to phospholipase inhibitor EMBV3_01046 AAACCAGAGGTTTGGGAGATGAGTCCCGGCGATATGTCTACAACTTGAGAAGACAGAGGC Gene GeneID:537616|POLD3:NM_001167904:31_cdna UTR3_Alt 2 NULL GeneID:537616 15 GENE POLD3 P68 polymerase (DNA-directed), delta 3, accessory subunit EMBV3_21506 CAAGGATTTTGATTTTGCCCAGCAGAAGCTGACCGACAAGAACCTGGGGTTCCAGATGCT Gene GeneID:516567|SFRS14:XM_002688523:99_cdna Constitutive 0 NULL GeneID:516567 7 GENE SFRS14 NULL splicing factor, arginine/serine-rich 14 EMBV3_13499 GGACCTCGGAGAGCCGGCGCCAGATGAAAGTGCCTATGATTACACAGTACCACCGATGGA Variant GeneID:507945|DUT:NM_001077873:47_cdna 85^223 2 EMBV3_24605 GeneID:507945 10 GENE DUT NULL deoxyuridine triphosphatase EMBV3_20386 AGATTTCACTGCAGGGGAGGCTGTGCCCAGGAGGTAGAAGAGAAAAACCTGGTCAATATG Gene BVV0102_018612 + 0 NULL GK000021.2:69186383-69228046 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03833 TACTAGATATGCTACTTCATAATCTTAGAACTTATTTCAACACTACAAGCTGTATGAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37887 CTGTCGACGGGCGAAGACGCTCACAAACTCATCGATTTTCTTAAACTGAAAAGGAATCAG Gene GeneID:514926|CDC123:NM_001080274:2_cdna Constitutive 1 NULL GeneID:514926 13 GENE CDC123 MGC133958 cell division cycle 123 homolog (S. cerevisiae) EMBV3_04237 AGGGTCATCACAGCTCAGCCACCAAAGTGGACTGGGACCTTCAGAGTTTCAGAGAAGTCA Gene GeneID:768064|C22H3orf24:NM_001077121:247_cdna Constitutive 0 NULL GeneID:768064 22 GENE C22H3orf24 C3orf24 MGC133872 chromosome 3 open reading frame 24 ortholog EMBV3_35585 CATCATGTGCTGCGGCTGAAAGCCCCGTTCTCAGAGTTGCCCTTCCTGCCTTTGCACCAA Gene GeneID:614457|NRIP2:XM_002687902:48_cdna Constitutive 0 NULL GeneID:614457 5 GENE NRIP2 NULL nuclear receptor interacting protein 2 EMBV3_37432 GTCTTCCTGTACAGAGCATACCTGGCCCAGATGCACTTCCGGAGGAGCCGTGGGAATGCG Variant GeneID:338085|COPE:NM_176673:24_cdna 210^959 3 EMBV3_09073 GeneID:338085 7 GENE COPE MGC133960 coatomer protein complex, subunit epsilon EMBV3_25501 GGAAGATGCTCCGTGAGCCCCACATTACTAGCAGGAAACCACAGCTCAGAACCGAAAGTA Gene GeneID:615765|LOC615765:XM_002685640:342_cdna Constitutive 0 NULL GeneID:615765 2 GENE LOC615765 NULL similar to KIAA1486 protein EMBV3_40855 CAAGGTCTACAGCCATAAGAAATTTGACAAGATGGTGGATGCTCCTGAGCGGAGTGCGGG Gene GeneID:527499|P2RX2:XM_002694451:48_cdna Constitutive 0 NULL GeneID:527499 17 GENE P2RX2 NULL purinergic receptor P2X, ligand-gated ion channel, 2 EMBV3_43459 GCCCCTACTGGAGCTGGAAAAACCAACATTGCGATGCTTACAGTTTTACATGAAATTCGC Gene GeneID:100336974|LOC100336974:XM_002690155:5_cdna Constitutive 0 NULL GeneID:100336974 9 GENE LOC100336974 NULL hypothetical protein LOC100336974 EMBV3_13236 GTATTTGGGGTGGGAGGACAGGGGCTGGACCCCCCAGGAACATTACAACACAGGCTCCAT Gene GeneID:617344|SH3BP2:XM_002688432:55_cdna Constitutive 0 NULL GeneID:617344 6 GENE SH3BP2 NULL SH3-domain binding protein 2 EMBV3_21942 ATTTCAGTGGGCCCTAGAATGTCACTCCCTTCTCTACTACACTCTGTCTAGCTCACTCTG Gene GeneID:540033|DNAJC27:NM_001098109:198_cdna UTR3_Alt 3 NULL GeneID:540033 11 GENE DNAJC27 RBJ DnaJ (Hsp40) homolog, subfamily C, member 27 EMBV3_24644 CCTGAACCCTCCATGGCCGCCGTCACTCCCAGTTACCATTTATTGTGAATCTGACCATCT Gene GeneID:618622|FTO:NM_001098142:462_cdna UTR3_Alt 2 NULL GeneID:618622 18 GENE FTO MGC139141 fat mass and obesity associated EMBV3_00669 ACTGCCAGGTGGAACGCTGCAGGCGGCTAGACGGAAAGAATTTACTTTCAGGTTTTCTTA Variant GeneID:533574|ZFAND1:XM_002692835:198_cdna 56^480 6 EMBV3_39161 GeneID:533574 14 GENE ZFAND1 NULL zinc finger, AN1-type domain 1 EMBV3_07858 GCTCTGATGGCCAAGGCGATCCAGCTGGTGGCAAGTCTGACGGTTAATGAAGTCTTTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16568 GATGGCTCATCTATACTCACTTTGTGATGCTGCCCATGCCCAGACAGAAGTTGCAAAGAA Gene GeneID:507707|TOMM70A:NM_001075328:72_cdna Constitutive 0 NULL GeneID:507707 1 GENE TOMM70A MGC139606 translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) EMBV3_12547 ACTGACAGAGGGCCTAGGTTCAACCCCCAGTCAGGGAACTAAGATCATGCAAGCCGTGCA Gene GeneID:539595|APOF:NM_001128502:25_cdna Constitutive 1 NULL GeneID:539595 5 GENE APOF NULL apolipoprotein F EMBV3_18252 CCCAGGAAAGTACACCCACAGTCAGGACAACTATTTCTCGGTGTTGCATAGGTCACGATC Gene GeneID:537560|RAB39B:NM_001076095:17_cdna Constitutive 1 NULL GeneID:537560 X GENE RAB39B MGC139619 RAB39B, member RAS oncogene family EMBV3_41439 TGGGCTACGAAGATGAAGAGCGCTCCAGATTACTGTTGGTAGAAGGTTCTATTGCTGAGA Gene GeneID:281170|FRZB:NM_174059:2_cdna UTR3_Alt 2 NULL GeneID:281170 2 GENE FRZB MGC137621 frizzled-related protein EMBV3_22974 AGCGCTCGCTGCTGGAGGACAAAGAGAATGTGTCAGAACTTGAGGCAGTGATGAAGAAGC Gene GeneID:514504|EPS8L1:XM_002695389:247_cdna Constitutive 0 NULL GeneID:514504 18 GENE EPS8L1 NULL EPS8-like 1 EMBV3_07560 GACCTTTCTGGAGAGCCTGGACCATGGACGGTAAAGAGACAATGGAAATTCATTTTGGGG Gene GeneID:507663|NCOR1:XM_002695817:173_cdna Constitutive 0 NULL GeneID:507663 19 GENE NCOR1 NULL nuclear receptor co-repressor 1 EMBV3_42633 CCTGATTTTCATACCACAATCCCAGCATTTTGTTTGACTCCACCTTACAGTCCCTCTGAC Variant GeneID:522795|KLF10:XM_002692759:103_cdna 456^561 1 EMBV3_22263 GeneID:522795 14 GENE KLF10 TIEG1 Kruppel-like factor 10 EMBV3_18518 CAACTGAGAAAGGTAGCATTTGAGTTTAGCAAAGACACTATTAAGGTATTTGCCCCCTCA Gene GeneID:404136|TACR3:XM_002688094:156_cdna Constitutive 0 NULL GeneID:404136 6 GENE TACR3 NULL tachykinin receptor 3 EMBV3_16986 GGTGACCACAGGTATATCGGATGGGAGCAGCCTATGATCAGGACACACAGCTCAATGAAC Gene BVT0101_064459 + 0 NULL GK000030.2:92832145-92886500 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20978 ACAGACAGATCCATCAACACCACAACAGGAGTCTTCGAAACCATTGGGAGGAATTCAGCC Gene GeneID:511147|CDK13:XM_002686897:83_cdna UTR3_Alt 2 NULL GeneID:511147 4 GENE CDK13 CDC2L5 cyclin-dependent kinase 13 EMBV3_13115 CACTGCCTGACTGTGTCTGTCTTCTTTTCCATGCTGGAGTGTCTCCTCTCTTACAGGATC Gene BVT0102_216415 + 0 NULL GK000004.2:64252101-64260780 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26568 CCAGTATTGTGGCAGAAACATCTGAATGCTGTCACTCAGGCGGAACTTAATAAGAAAGCT Variant GeneID:532277|RXFP1:XM_002694415:17_cdna 346^451 3 EMBV3_35286 GeneID:532277 17 GENE RXFP1 RXFP2 relaxin/insulin-like family peptide receptor 1 EMBV3_26401 TCCCACCACCATCACCCAAAACTACATCTGAGAAGAGACGACCTTCGACATCAGACTGCA Gene BVT0102_290634 + 0 NULL GK000006.2:108501584-108508716 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40314 AAGAGAGCTGGGCGAGGCAAACAGAAGGTCAAGTCAGGGTCTGATGCAATGCCTGGTATA Gene GeneID:533033|LOC533033:XR_084718:107_cdna Constitutive 0 NULL GeneID:533033 8 PSEUDO LOC533033 NULL similar to Deafness, autosomal recessive 31 EMBV3_24917 CAGTTGCTTATTGATGAGAACAGGGTTTTAGGAGATGGCAGACTAACATGTAGGAGCCTG Gene BVT0102_139242 + 0 NULL GK000003.2:32404452-32512634 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169467 TCONS_00169463 TCONS_00169456 TCONS_00169462 TCONS_00169465 TCONS_00169457 TCONS_00169466 TCONS_00169458 TCONS_00169464 TCONS_00169459 TCONS_00169461 1 XLOC_103370 Coding TCONS_00169465 XLOC_103370 Coding Coding DRAM2 3:32377484-32406466 j TSS126879 3492 1 TCONS_00169465_1 179 0.0240549828178694 6 0.879714295572962 1.30941577681297e-15 1.11380231189311e-48 1.40289643826712e-10 3.77441679018091e-17 1.19316968794423e-05 1.01787998690669e-05 3.17050799793071e-13 2.50844207368941e-12 1.72937180688827e-10 5.96714121337601e-24 2.22426089811814e-06 8.7959911649739e-05 2.45572836721494e-05 2.52259140288434e-13 2.31892233253563e-12 0.000305890981052418 0.00343814269520814 0.00105995418985704 2.46916855952022e-18 0.000204944605037177 1.56853779111544e-16 5.87241266220672e-07 8.67255366858308e-11 1.37796568815057e-05 1.85788482293288e-14 4.58490789085808e-09 8.55321845795474e-05 6.48270783828385e-07 6.9509068724352e-10 0.000490591464921709 XM_005204189.1 DRAM2 PREDICTED: Bos taurus DNA-damage regulated autophagy modulator 2 (DRAM2), transcript variant X1, mRNA. 0.0 4953 100.00 0.786082474226804 XM_005270469.1 DRAM2 PREDICTED: Homo sapiens DNA-damage regulated autophagy modulator 2 (DRAM2), transcript variant X1, mRNA. 0.0 859 78.94 0.29524627720504 TCONS_00169465_1 sp|Q6UX65|DRAM2_HUMAN DRAM2_HUMAN DNA damage-regulated autophagy modulator protein 2; 1e-72 224 70.62 0.888268156424581 1 noncoding 0 1 1 1 0.0458019893486158 0.718130229026114 0.0458019893486158 0.718130229026114 ACCAGGGAAGTCCAGTATAGAAAGGAGACCTGTTTGAGATGTGGTGGTTTCAGCAAGGCCTCAGTTTCCTTCCTTCAGCCCTTGTAATTTGGACAGCGGCTGCTTTCATATTTTCATATATCACTGCTATAACACTTCACCATGTTGACCCTGTTTTGCCTTATATCAGTGACACTGGTACAGTGGCTCCAGAAAAATGCTTGTTTGGGGCAATGTTAAATATCGCCGCAGTTTTATGCGTTGCGACCATTTATGTTCGTTATAAGCAAGTTCATGCTCTGAATCCTGAAGAGAATCGAATCATCAGATTAAACAAGGCTGGCCTTGTACTTGGATTACTGAGTTGTTTAGGACTTTCTCTTGTGGCAAACTTCCAGGGTTATGTGCTTCACATGATTACTACGGCAGCAGAATGGTCTATGTCACTTTCCTTCTTTGGTTTTTTCCTGACTTACATTCGTGATTTTCAGAAAATTTCTTTACGGGTCGAAGCCACTTTACATGGATTAACCCTTTATGACACTGCTCCTTGCCCTGTTAACAATGAACGAACATGGCTACTTTCCAGAGATGTATGATGAAACGACAAAATATACCTTTGGTGATTATGATTCTCAGGGATTGGGGAGATATTCATGAAAGTTACTTATTCTGCTCTGAAGTTTTCAACCATTTAATCAAGGCTGACTGTGACATGAAAGAATCCCGATAATCAAGAGACATGAATTAAGACATTTGATGTTGTTTTAAAGGACATCTTCAAGAGGATCATGTAAAAACATTTATGCCTATACTTTTTTAGCCCAGAAAGTATAACCAAAGGACTACAACATTGTATATTTTTTTTCTACTTTTTTTTTTTAAAGAGAAACAACCAGAACTGCACCAAGCAGTCTGCAAAATCCAACTTTTCACATTTTTAAAACCATTAAAACTCATGATTTGTTCGGAGCAGTTATGTAAGAGAAACATTTCAGGACCCCAAATAATCAGCAATGCTCAACAGCTCCTTTAGAATTGGGTTTTGAAGTAATAGTTTTACCATATTAATACATTTCATACAGTCTTTATAAAATTTATTTCTTCTGGAATCCAACTTTAAAGGGAAGTAGACCTGAATTCACATGAGCACTTTAATTGCTTAAGCTTTGCACAAGATATTCTGTGGATATTGATTTGATTGCTGCCACAAGGCCAGATACTATGCTAAATGGTCTGTCACACCTGCTCGCTCGCACTTGTTTCATGAAGGTTAGTCTCTGATGTGAAACTTTAATTACTAATGAATGAAAAAAAACAGCTATAGGTAAATGTACTCCAGTTACATTTTGTATAGAACAGTGATTAATGTTCCGACACAAGGCTGAGAAGTTTCTGAATAACAGCAAGTATAATTAATGTAAAAGTCACCTCAAACTGCACTCAAGAATTCATTAAGATTTCATTTATAGCAAATTATAATTATTTGAAAAAGAAACCTTGAACAGATGTTGGACCTTTTTTAATGGGATGTGATCTTTGTAGAACCCCAATTCTAAAGGATAGAAACAGCAATCCAGAAAAACTAGGTGTAGAATAATGATGATACATGCACCCACCAAAATAATTTTGTTTCTCTCTGGACATGCAAGTAATTGGAGCACTTCTACTTGAATCCTTATCTGTGCAGATAAAGAATGGTTTACAGATCCCAGATAAAATTCAGAAGAAGAAAACACTCATCTGTAAGGTGCCCAGTGATCAAATGATTTGCAAAAGAATCTCTGAAGAAGATTAACAAGGTTTTTCTTTTTAGAAGAAGTGGATCCATAGCCAGAATAAAAGATGGTAAGGAAAGGTTTAAAGTGTAAGAGAGAGCAATTAAGGGAAGATGGTTATATGGTAGAACCATAGATCTCAATTATGAAAAGCTTGCTGGTTGTAAAAAGGTAAATGTTTCTGAAGACTTCTGTACTTATAAGATAGAAAATGGAATACAATACTGTTTAGCTATATAAAGCAACAGTGAACATGGGAAACATTTCAGTAAACACTGGTTGATATCTGACATCACTGAAAAAAATTTTCAGTACAAACCGTGAAACGTCTTTTTAATGCCTCTGAAAATCATGATTTTCATCATGTGCAACCACATCATGTGCAACCACATCTGTGAAACAGTATCTAGTCCTGACTGCTGTCCCTCAAGGAAGCTGTAATCTAAGTTGTGAAGGACCACAGTATGGTAAGAAGGAAACAGATAAAATCAAAGGTCGTAAAATTATAGTTTATGTGGGGGCAAGATGGCACAGGGAAGAACATGGACTTGTGCTTCCATATTAGAACTTAGAGGTACAGTAACAACTTTAAATTATTTTAAAAACAAAAAATATTACTTGAATAGTATTTTAATTTCATTATTTAACTTTTACCCTTAGAAATAACATGGGCTGAAAATATGAATAAGTTTAAAAAGAGATTATAAATAGAAATTTTTGAATGTGCCTTCATCCCTTATCTTAAGCCTGAAGTAATGGAAGCTAACCATACCCTCCCTCAAAGTATGCCTTGCCAACACTATCGGATAGTAGTATTAATAGCTTGGATGAATGGGTAAGGTAGTTCAATTAATTTGGTTTTGAATGTAGACTTTTGAGAATAGGAGGTTAAGCTGACAAAATCAACAGATACTGTTTCCTGAGTTCTTAAAGACACGGCAAGACAACATTTCCCTTTTAGTCAAGTATAGGCAAAAGAATGAATTTTAGTCATGAAGTGTAAATGAAATGGATGTGTCTATTTCAGCATTATGATTTTGAAAAACAAGAATGCTGTTACCCAGTTTTGTCTCCTTACATCAGTTGCTTATTGATGAGAACAGGGTTTTAGGAGATGGCAGACTAACATGTAGGAGCCTGAACTAGTTCTCTTTTAATCAGCTTTTAGAATATCAACCTAGATATCTAATATAATGTGAGAACTCTTTTTAATTATCCTGTTTACCAAGATTATCCGTTTCTAGAATAGTGTCATGCTGTAAATATTCAGTGGATTTATGAAAGAGAAAGACAACTTTTCTTGTGCAGTGTTCTATACAGACTTGCCATGAAATGAAATTGAATAAATGTTGGATTACTGCCCTAATATTGTCTTTTTTTCAACCAACCAGAGTGCTGGTTTTTAAAACAGTGTATTTATTAGGAAGGTAAGAATGTAGAATAGATCTAAGACAAAGGAAAAGTCTTTCTGAGGCATTATTGGTCTTACCAATGTAAACAGTTGTATCCTCCACAAGGCATGGTAATTTGAAATACAGTTTATCTGAGAATTCACCTACTCAGAAGACTTGAACGGAATACAAAGAGAATGCCTCAGAAATTCTAAAATATACAGTTGGAATGTAGGGCAAAGAGAAATTCCCCATGTTTGGATAACTGGCAGCTCAAATGAAAAGCACAAGGATTCCCGTAGAGTCACGTGAATCAAACTAGCAGTAACAAAGCTCGTCTCCAC EMBV3_08448 ATGGACATGAATCACTAGAAAGACAGAGGAGGCTGGTGTGCTATAGTCTGTGGGGTTGCG Gene GeneID:616379|SEPN1:NM_001114976:287_cdna UTR3_Alt 2 NULL GeneID:616379 2 GENE SEPN1 MGC138923 selenoprotein N, 1 EMBV3_27066 CCACAGATTCAGCATGGATTGCATCAGAAAGAGGAGGCTATGTTCACTCAAAAGTCTTGC Gene GeneID:526133|KCNAB1:NM_001025336:136_cdna Constitutive 0 NULL GeneID:526133 1 GENE KCNAB1 Kvbeta1.1 MGC148777 potassium voltage-gated channel, shaker-related subfamily, beta member 1 EMBV3_30313 AGCTACACAGCAGACTTGTGTGGTGGGTCAGCTGTTTCTTTTTTAAAACAACAAAAAACC Gene GeneID:613830|LOC613830:XM_002699213:121_cdna Constitutive 0 NULL GeneID:613830 29 GENE LOC613830 NULL similar to C11orf61 protein EMBV3_02321 ATCACTGAACATCTTCATGTATTCCAGACAAACCGCCCATAATTCCCCGCAAACAGCGCT Gene GeneID:515382|SCRG1:NM_001100370:32_cdna Constitutive 0 NULL GeneID:515382 8 GENE SCRG1 NULL stimulator of chondrogenesis 1 EMBV3_10301 CAGTTCATATGCAGAACGTATTTAGCCATTACCCACGTGACACCACCGAATATATTACTG Gene GeneID:338068|ACVR1:NM_176663:58_cdna Constitutive 1 NULL GeneID:338068 2 GENE ACVR1 ActR-IA activin A receptor, type I EMBV3_28957 CAAACTAGAACTTCAAGTAAAGAAGAAAAAGTGGGGTGGGTCAAAGAGATATTTTAAATC Gene BVT0101_080769 + 1 EMBV3_20642 GK000009.2:14983764-15034320 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236665 1 XLOC_144544 Coding TCONS_00236665 XLOC_144544 NonCoding Coding - 9:15030765-15035429 - TSS177122 3966 3 TCONS_00236665_5 91 0.464195663136662 2 0.149903495603689 0 0 0 0 0 0 0 0 5.968323886089e-06 3.834840229442e-05 4.44547572104768e-06 1.31275077377069e-05 0 5.93040127475974e-07 0 0.000599466162561673 0.000121398486293516 0.00150561392790586 0 0 0 0.000187357971385933 0.000181625341524682 0.000477662218546405 1.34382172582545e-07 0 0 0.000100782407992437 3.21840819958215e-05 0.000161310420974138 XR_227695.1 LOC101908400 PREDICTED: Bos taurus uncharacterized LOC101908400 (LOC101908400), 0.0 1346 75.63 0.461926374180535 0 noncoding 0 0 0 0 -0.106028241539422 0.350594142060291 0.0219780169290835 0.639284267773922 TTTACAACCTTGAGATATTCTTTTGATTTACTGTAATAACCGATTGAAAGAGTGTATAGCTCCCTTGCCAATACTAGTGAGGGGGCCACTCTCCACCACCTTCTGATGTCTGCGTCAGAAGCTTTCTCTGTCACTTTTCATACTTTAATAAAACTCTGCTACACAGAAGCTCTTGTGTGATCAAGACTGGTCCATCATGAATTTGATACTGTTCACCGTAAGCTATTGTTAGCAGTGTTCCGACTCTCCGGATGGCCGAGCCCCGACTGGACTCATTGGAGGGATGGACCAACTCACCAGGAATGGCCACAGGATCAGGTGAGGACCCAGGGCCAGTCCCCAGTCAGGTCCTACCCCAATGGGTAGAAGTGGAGACTGATCACCTCCTTGGAGCTCCCAGGAAGGGAGCATCAGATAGGGAGAACTGGGGACTCAGGGGAAGGGAGGCATTGTGACTGATAACCTCCTTGAAGTTCCCTGGAAGGGAGCAACAGTTAAGGAAACCTGGGGACTTGGAAGAAGGGAGGCATTGTGATAGCCACTGAATGTGACTGTGTGATTTCTGATTGAACAGAGAGAGAAATTTTTCTTTTTATAAACTGCAAAACCAATTTTTGCATATGCAATTAAAAACAACTAGCTTTTAAAAGGCCTGCCTGGGGAAAAGCTGAAAGTCAACCCTTTCCATGCCCTTGAAATACACAGCCAACTTTGCCTGAGACGTCAGCCTTGGGCAAACTAGAACTTCAAGTAAAGAAAAAAAAGTGGGGTGGGTCAAAGAGATATTTTAAATCTCAAACAGAAAAATATAAGATCTCTGTCTGTCTGTATTTATGTATGTCTCAGCATATGTCTTTTGTTTTGTTTTCCGATAATATTGTTGAAATTGTAAATGAGTTCTAATTTAATTGACCTAAAGAAAAGTAAGCACTTACACATCAAATAATTCTAAATACAAGAAAAATAAGCCTAAATAATTTTCAGATTCACATGAACAGGGAAATATTCAATATTAAATATCTAGTATTAATGTTTGTTTGCTAATCTAAAGGAAGTAGGATGTATGTTTTTAATAAAGAAGATACAAAAAATAAAAATTACATTTTATAAAGGGAAAAGAAAGTAGGTCTGACTTACAGGTGGCCGTTACAGAAAGTGATTAAAAAGTTTGTGGAAAGCAGACCCTGAAAAAAAAAATTGTACATGGTTAGGACTAAGTTTAAAATAAATTTAATTAAGTTTACCTGAGTTTAAAGTAAGCTGGTGCAAAACTTGAATTCGGTCTTTCTCTTTGTTAAGAGGACATACCTTCTTCAGATGTTGAACTGCTTTTAATAATAGATTTAAGTTTCTTACCTCTTAATTGACGAGTTCTATATTTACCTTTGAAATCTTTTGTTACCTTGGACTAAGTAAATAACTATTATTTCACAGTGACTTATATGATCCTACCTGACTGAGTTGTTATAAACCCTTTTGATATTTATCGACAAAACGTCCTAAATAACTTGACTTCTAGCTAACTTTGGGATGCTTCAGAGGGCCCCTGAGACACCCCAAAGAGCTATTAAGCTACCTGGGTTCACTGGACTGTTAAATTACATGGGAAGTACTGTTAAAGTGGCGGGGAAAAATATCTTTTCAGGTTATACTGTATGGCTGATGTTACTAATATAGATATCCTGAAATTATGTGAAATTCATATAGATCTGATATGCCCTGATAAAATATGGTCAATTATAATTCTAATTATCATATTAAAGTGTTATGACCAGGTTTATTTGTCAATTGCAATAGAATCAGATTTTAAACATGCCTTCTATGGTTCTACTTTCATGCCTTTAGAAAAATACTGCTAGTTTTTCAAGATTTATGGAAAAAACTTTCTAAGATTAAGCAGATAAACAAATTTTGTTATTAACTGTAAGCTGGTACCAGACTGGAATTTGATCTTCTCTCTGTTTAGAGAACAAAGATTTCTTAAAATGCAGCTTTCAATAACAGATTATGAATTTCTTTGCCTTTAAGTGATTTATATTTGTTTTTAAAAATCTTTTTGTTACTTTGGTAAAGTCAATAAACATTATTTAAGATTATGGTACATGTAGACAAAGCTCATTCTGCTTCAAAAAAAAAAAAAACCCTCATGGTTAGACTTTTGGTATCCTGATGTCCTTAAAACATGGCTATAGTCTGTTCTTAAATTAGGAAATTAAAAATAAATAAACAACAGCTGAAAATCAAAGAGCTAGGGTTATGGGAAATCCAAGAGGGTTGCTTGGCTTTTCCTGGCTCCCTGACAGACCTCATTTTTATTTGATGGGTTAAAGCCTTACCTGGCTACTGTGTTAATGCCCTCACAATGAGTCCTCCAAAAAGAAAAAAAAAAAAAAAATTATGCTTCACTGAATATTAAGTGCTAGTTTTGTTAATTAAGGTCTATGTTTACTAAGACTCACTTCCGAGATAGTTCCTTGTTATGTTATGTTGCTAAAAGTTTTAATTAAGTTATTAGAAAGGACACTAAGATTGTTTCTAGAGCTTATCTCAATAACCAGTCTTTGGATAAAAGTCAGATGCTCCTTGATATACAACCAGGAGATTAACAGTTGGTTATAATCATTTAACTGAGTCAGATGACCTGGGGTATACCCGGCTGTACCCAATGAAAGTTCTTGACTTAAATTCTTGCTTGTAACCTTACTAATAACTGCTTGCTGTATTATTTTCTATGTAGCTTGTTTCAGAAGATTATTTCTTACGTTACCAAATGTGTGGCTGAGCCTGTGATAAAATGCTGATATGCAGTTCCATATGAGATCAATAATTGTAATAATGTAACTCTAGATATGGGAAGAAGCAAAAAGAGGAAATATTTTCCTGGCCCAAGAGGTTAGTAAGGTAGATATGGTCCAGAGACTTTTGCTACTTACAAGGGCTGGCCTACTGACAACGCATTGAGTGGCCTGTCAATGGAATCTTTGTTAGACTGGGAATGAGCCTTCCCAGCACTGTGGGACACAGTGACCATGAAATGCCCCCCAAACATGGTCAAATATGACTAAGAAGGGGCCCTGCTGACTGGAAGTTGGCCCTTGTCAGCTGCCTCTACAAAGATTAAATCATGACCACTGCAAGATGCTGACCTTCAACACCCCCTTGAAAGGAGTTCAGGGTGGAGACAAAAAATAAGGTACCCTGTGCTCTGGGAAAACCCAGAAAAACAGGCCTTCAGATAGTCAGATGTTTTCAGGTAAAGATTTTTATGAGTCCAAATTCTTGCATCTTCTCATACCTAGAGAAACACTAATATCGTGAATGAGTGTCTGGACTTGCTTCTCCTGGCTAGCCCCTCAGCAGCTTTCCTACATCTATTCATCTTTGGACCAAATATCTTTAACTTTCTTGTTGAGTTTGTTTCTCCAAGTAGTACTTCAAGAAGAATGTCCCCCAGCCAACACCCAGACAATGCTAGAACAAGCTGCCTTATCATTCTGTGTACTCTCATCTCCCTCCCCAAAGTCCCCAAATGCACCCCAAGGTCCTCAGGCTATTCTCCCTTTGAGATCTTACATGGTAGACCAACCCCAGTGATAAAAAAAAAAAGCTCAAGGGAGACCACCACCAACTAGCTGACCTGGAGATGTCCCGACACCTCCAGGCCCTGGGAAAGTCTTCTGCCATATTGCCCAAGAAAACTTAGAAAGGACATCCATTCCTTTGGGCAATTGGGTTCATGCCTTTCAGCCAGGAGCTGAGGTATGAGTTAAAAATTAGAAAAAAAAACAACACTTCAGCCAGTTTGGACAGGTCATCCTGGCAACCACTACTGCCGTTAAAGTTATAGGCGTCATCCCTCGGATCCACCACACCAGAATCAAGAAGGCAGCTACTTCCTGTGATGGGGACACCTGGAAAGCAGTTGGTGACACCTGGAAAGCAGTTCCAGACCCCAAAAACCTCCTC TCONS_00236666 TCONS_00236667 TCONS_00236668 TCONS_00236669 s 3' 7339 TCONS_00236666 TCONS_00236667 TCONS_00236668 TCONS_00236669 s 3' 6406 EMBV3_35900 CAAAGACTTTCTGAACTAAGAAGGTTTGATATGGCAGTGATGTTTATGTCAGAATCTGAG Gene GeneID:510621|RPAP3:XM_002687317:121_cdna Constitutive 0 NULL GeneID:510621 5 GENE RPAP3 MGC148395 RNA polymerase II associated protein 3 EMBV3_05693 CAGGATGCTCATTTCAGAGGCTGGAGAACCAAGGACTGGGATCAGCTCAGGAACAGAGTA Gene BVT0102_167844 + 1 EMBV3_08026 GK000011.2:99646486-100030817 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33178 TCTCCGTAAGATCTCCTTTGTGTGATTACACACTAACTGGGGACTTGGTCTTGAGATCTG Gene NW_001496174:1953-1463 NULL 0 NULL NULL NULL GENE ZFY Putative homolog to Homo sapiens Y-linked zinc finger protein (ZFY) gene EMBV3_42244 TGACTGTCCTTTAGTAGGGCTCATAATGATTGTCATCGGTTTAGACCTTGAGCTTGGAGC Gene GeneID:514141|OGFOD1:NM_001166613:231_cdna Constitutive 2 NULL GeneID:514141 18 GENE OGFOD1 NULL 2-oxoglutarate and iron-dependent oxygenase domain containing 1 EMBV3_00377 AAGTATATTCCATTATTTGCATTTTTGACGTGAGTCAGAATTTTGACAGCTTTTATGTGG Gene GeneID:539501|HELZ:XM_002696228:49_cdna Constitutive 2 NULL GeneID:539501 19 GENE HELZ MGC127411 helicase with zinc finger EMBV3_37320 GGTCGCATGAAAGGACAAGCTTTCATTGGCCTTCCAAATGAAAAAGCAGCGGCAAAAGCG Gene GeneID:768060|RNPC3:NM_001077117:209_cdna Constitutive 0 NULL GeneID:768060 3 GENE RNPC3 MGC127854 RNA-binding region (RNP1, RRM) containing 3 EMBV3_42882 TAAGTTAGTTTGGAAAGCCATCAATTACCTGCTGTTTTACCCTCCGGTGTGGGTCCCCGG Gene BVT0102_037874 + 0 NULL GK000030.2:133407293-133528331 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248403 TCONS_00248405 TCONS_00248404 1 XLOC_151584 NonCoding TCONS_00248405 XLOC_151584 NonCoding NonCoding - X:133482407-133503147 - TSS185791 4569 8 TCONS_00248405_8 72 0.372729262420661 3 0.779835093302474 0.00124595971967422 0.000758601361253028 0.00154016943162863 0.00120655541075557 0.00139950878738656 0.001006093318411 0.000924812027607149 0.00126718980845096 0.00179385795071159 0.000615275805869631 0.00013276879828629 4.46227539875873e-05 0.000410318393581791 0.00145320716022683 0.000604854236460514 0.00029424966744888 3.63367077745457e-06 6.5714011108947e-06 0.00160850566143363 0.000984045413685225 0.000672396857781762 0 0 0 0.00135340017212771 0.00137911453583806 0.00169914237869161 1.2887644749236e-05 4.25001065945644e-06 9.73728338000301e-05 XM_005221991.1 C21H15orf17 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf17 (C21H15orf17), transcript variant X1, mRNA. 1e-96 360 87.64 0.0549354344495513 0 noncoding 1 1 1 1 -0.159991736465036 0.294340864006481 0.0195884826560905 0.781441046852407 GGGCAGGAGGAGAAGGGAACGGCAGAGGATGAGATGGTTGGAGGGCATCACCGACTCAGTGGACATGGGTTTGGGTGGATTCCGGGAGTTGATGATGGACAGGGAGGCCTGGCGTGCTGCAATTCATGGAGTTGCAAAGAGTTGGGCACAACTGAGCGACTGAACTGAACTGAACTGAACCGGATTGTATGTCGGCTCCTTTGCTTACCAAGCACATGACTTTAAGCAAATGATGTATGCTGTCTGAGTTTATCCTCTGCTCTGTCAAATGGGGCCAACATCAAGGGAACTAATGCCCAGGCGAGAACTAGGAGGCTGTAGCCCAGTGATTCTTGCCCTTGGCTGCAAAGTGGAATCACCTGGAGACCTTTAAAGTCCACCTCCCTCAATTCCACCCCCTGATGCCTGGGTCCCAGCCCGGGAAATAGTGATGTCATTGGCCTGGGTTGTATTCTGAACAGCAGGTGTTTTTAAAACTCCCAGGTGATTCCACTCTGCAGCCAGGGCTGAGACCCATGACTAGAGCCACTCCCACTCTCAAGGGATTGTTTGTGTCTGCGGCCAAAGAAGCAACAGTCAGCTCCTGCTCTCTGCTCCAAGCTGTCAGGAAATAGCCTGTAAGGATCAGGCCGGAATCAAACCTCTGTCTTAAACTTCAGAGTCAACTCAGTCAGCTAAGTTAGTTTGGAAAGCCATCAATTACCTGCTGTTTTACCCTCCGGTGTGGGTCCCCGGGCAGCGGGGCGTCAGCATCAGACGTGCTGGCAGGGCTGCTTTCCAGTGGAGCCTGCTGCTGCTGCTGTTTTTCTAGAAGCCAGAGCAGATCTTCAGCTCCCTGCTGCCTGTCAGTCACAGCTGCACGACTGAGGCCGAGGGACCAGACGCCTGGCTGCCCGCCACTGGAGCTGGGTAGCAGATTTGCTGAGGTGTCCTTGGGGCCAGGCCAGCCTTCCAACTCTCTGTGAGGGCTGGGGATGAATTTCTCTGAGCTGCCAAACGATGCTCGAAATGAACGTGATCCATCAGTGGAATGAAAGCCTTGGTCCAGTTGCTCTAGCATGACACAGCGGGCCAGCACCAGGTCCTGTCTTTCTCCTGCACCTGATAAATTGCAAGAGAACCACTGGGGCTCACCCGCACAAACTTGACTGAGGAAGCTCCTTCCAATGGCTTCTAGGAGACCTATTAATATTTGAGCTGAGAAGATCTTGGCCCAGAAAGTTTGGCTATAAAGGAAGAATAACACCTACCTTACAGAGTGACTGTGAGGATGAAATGAGAACATCCTTTTCTGTGAGTAATCCCAGTGGAAGCCCAGCTCTACATCTCTAATCTTGGCTGACATCCCACTTGAAGAAACACAATCTGGAAGGCACAAAAGAAATGAATACTTCAGGCTTTTGTTCTGTCTTTCTCCAGGATATGTCAAAAGGGAATTGGGGGCAAGTGAAATTTTACAAAACTTCATCAAAATCCTCTGTCCTATCACTTCCCCTCTGAAACCTCCGCATAGATGATGGTGACCGTGGTGATTCATTGACCCTTGCTGATGTGCTGGGAACAAGTGTTTTACATGCATCATCACATCCTAATTGTTATCCATGTAGTCCGGCTGCAGAACCATTCTTAACCATATTGTCTCTCAGTAACACACCAAAATTCACTCTTTCTCTACCTTTCATGTCCTTGTTACTGCTCTGTTTCCCCCTCACTCTTCTCTTACTCATAATTTTTCTTTGTGTCAAAATATGCTGCTGTCATTCCAGGCTAGAGGTGATCCCAGATGTCTCTTTGTCTGTGGACCACATGGGGCTGCTCTAGTGTGCCGAGCTGTTCTGGAGACATTCTTGGTCCTTCCAGGCTCTCCTCAGGTAAAGCATAAGGAGTCTCAGCATGGCCCTTCTCTTACCATGTCCCACTTCTGTGAGAGATGATTGTGGGTCTGGTGAACAAAATTTGACTTCTCAGACTGCAGTAAAGCTGCAGAAAATGACCACAAATTTTTCCCTTCCGTGTGTCCCCACTCCTGCAACATTTGTAGAACTTGTCTGATCATGTGACTTAGCTGGGGCCAGAAGATGATAGCAATCATGACATAAGAAGACACTTCAAAAGTGTCTGCACAATGGGACTTGCTTCCATCATATAACCAGAGACCAGGGTGGGGAGTGGAGAAGGCAATGGCACCCCACTCTAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCAGGTAAGAGTCGGACACGACTGAATGACTTCACTTTGACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGCAGCCTGGTGGGCTGCCGTCTATGGGGTCACACAGAGTCGGACACGACTGAAGCAACTTAGCAGCAGCAGCAGGTTGGGGAGAATCAAGGTACCCAAACTGACAGTTGGCCAGCCCCAGCTGATCTGGCAGCTGGGTGCACCAGCCAGCCCAGTTCTCTGCCCTGCTGAATCTTCTGCAAATTGCCTTCCTGAAGAATCGTTATTGATCCACAGTCAGCTTTGTGTGAAGCATCCAGGGCATAATATGTGTGTGTGTATGCTCATTCACCAAATCGTGCCCGACTCTTTGCGATCCCATGGGAGCCCATCAGGCTCCTCTGTCCATGGGATTTCCCAAGGAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCGAATCCGTGTATCCAGCACTGGCAGGCAAATTCTTTACCAGTGAGCCACCAGGGAAGCCCCAATAGGTGCTCATAATAGGTGCTCAATAAATACAACTTTATTCCTTCTCTTTCCCCTGTAATCACTCTTTCTCTTAACCTGATGAAATCAGGGCCATTTGTGTAAAGCTACAAATTAAACCAGCTCAGGTGGACTCGTGACTTTCTGTTCCTGGTGGATATCATCTGGGCCAGCACAGGTCATGCTTCAATTGACTGGCTCTTGTCATCTGTGCCAGAGCATATTTTCCCCAAATGGCCATAATAGTTCCAGTCCCACATGTTTTCCCAGAACCTTCTCAGTCCCTCATCCAAAGGTGGAGTCTGTGTTGCTTCGCCTTGAACATCCAGTGGACCTGTCTGACAGCTTCAACTAGTAGACTACAATATTAGTTGTGACTAGCCTGTGACTTCCAAAGCTGGGTCATATAAAAGGCAACACAGCATCTGCCTGGCACATGTGTGCTTTCTCAGGTTCTCTCTCTCTCCCCCCTGCCTCCTCTGCCCTCTTCCCGTCTCCAGGCACTGTTGGCATTCTGAGCTACCATATAAGAAATCTGGGTACCCTGTGGCCATCATATTGGAGAAGCCACAGGGAGAGACTGCATAGAGAGAGAGATGCCTGAGGATTCCCAGCTGCTCAGGTCCTCCCAGCCCAGGCACTAAACATTTGACTGAGTAAGTCTATAAGATGACCTAAATCACAGTCGCTCTCTAAGTACAACCTCACGACTAGCTTTCTGACCACCTCTTTTGAAGAGGCAACTTTTCCACAGCCACGCCATGTCTGGCATAGTCATCATGCAGTGTGCTGTTGATGTGGTTGTCCTTACCTGTGCTATCCACAGTTGAGAACTCAAGGCTGGTGCTGGCCAAGTGGATAGTGAGAGTGAGAGCCAGGCATGAGATGACAACATGTAGTCAGAATTCATAGAGAAAATTAGGAAGGGAATACTGGATTAGGGAAAAACCTGAAATGTGATTTTCTGGGGGGTAACTTTTAGATGAAATGCAATTCTCCACCTTTCAAATAGTCACAGCAGCAAAGACATGTAGCCCAGTGATTGGCATCCTAAAGTCCCCTAGTGTGTACCAGAGCCTATTCTAAGCACGTTCTGTGTGTGAGATAATTTAAATAATAATCACAACACCACCATTTGGGAAATACTGTTATTACCTTATTTTTAAAAACTTGCCAAAGATCACTTAAGTAATAAATTGCAGAGTTAGAATTTGGACCCAGCAGACTGGTTCCAGAGTCCATGATTTTAATCACCGAACTCTACTGTTTATCAATAATTGTCAAACATATGTTTCCAAATTAATGTCTAAGAAAACTAAGATTTTAAGGAAATGATTTATAAGCAAACATTTATCTTGGGAGACGATAATGGGGATACTGGTTTAAAATGTTCAAAATGATTTCTGAATAGAAAAAATTTAATTCTGTTCACCAAATTGTGAATATAAGAATTATGAACAAATACTCCATTCTGTTAATATATACAACCAGATGTTGGATTTATGTTTCATCCACTTTTAAGTATAGGGAAAACCTCATGCACCTATTAATAATTAACAATAAAAACTGGTATAAAATGCAAGTAAATTTAGTACTTATTAAAAACTTCTGAATAAAATTTGTGGGATAAGCATATGGAGAGTAAAAGCAATACCAATGACCTAAACTTTATTAGACATACGGCTCAAATAACAAACTTTGGTTTCAAGCCAGCATATGTGCTGTAAGGATGCTTTCCCTCCAAAATAGTTCCAGAATCTG TCONS_00248406 TCONS_00248407 TCONS_00248408 TCONS_00248409 TCONS_00248410 TCONS_00248411 TCONS_00248412 TCONS_00248413 TCONS_00248414 TCONS_00248415 TCONS_00248416 TCONS_00248417 TCONS_00248418 TCONS_00248419 TCONS_00248420 s 3' 56718 TCONS_00248406 TCONS_00248407 TCONS_00248408 TCONS_00248409 TCONS_00248410 TCONS_00248411 TCONS_00248412 TCONS_00248413 TCONS_00248414 TCONS_00248415 TCONS_00248416 TCONS_00248417 TCONS_00248418 TCONS_00248419 TCONS_00248420 s 3' 39322 EMBV3_13271 CTGTGGTCAGCGCTTTCAGGCACTTGATGTTTGTTGACTGACCGTCTGAAGGACTGAATG Gene BVT0102_413305 - 1 EMBV3_29905 GK000008.2:71457016-71542980 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13347 CTCCTTGTGCACACATGTGAGAGATTCCCAAGAGTACCTACATATGAATGACGTTGCTGG Gene GeneID:613457|MGC133504:NM_001037618:23_cdna Constitutive 0 NULL GeneID:613457 2 GENE MGC133504 NULL hypothetical protein LOC613457 EMBV3_36914 TTTGGCATGTACTGCATGGTATTCTTGGCGGTCCGGTACATCTCCGACTTCTTCAAAGCT Variant GeneID:504545|PPAP2C:NM_001045890:23_cdna 602^778 2 EMBV3_32241 GeneID:504545 7 GENE PPAP2C MGC138011 phosphatidic acid phosphatase type 2C EMBV3_04136 CCATACTGGTACTAATGCGGTTGGTTCTTTCTAGTTCAACAGCTCTGGAAACCCGGTGGC Gene BVT0102_151267 + 0 NULL GK000008.2:25319688-25340758 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00230374 1 XLOC_139864 NonCoding TCONS_00230374 XLOC_139864 NonCoding NonCoding - 8:25338295-25338754 - TSS171878 459 2 TCONS_00230374_1 37 1 0 8.89260715530229e-05 8.75679671153232e-05 2.01611273036483e-05 0 0.000107563867328324 0 5.08210233471033e-05 0 0.000120328931597484 0 0 0 1.25023183245067e-05 0.000860862122162188 0 5.75416189955377e-05 0 0.0012026124405515 0.000156229463375662 0 4.62965604137513e-05 0 0 7.30483849800298e-05 0.000196231274788113 0 0 0 0 0 NM_001040272.5 ADAMTSL1 Homo sapiens ADAMTS-like 1 (ADAMTSL1), transcript variant 4, mRNA. 3e-79 298 75.11 0.984749455337691 0 noncoding 0 0 0 0 -0.0681739491584069 0.629275429365523 0.0173389020209759 0.803111994451742 ATAAATAAGCTGTATTATCTGTACAAAAAAAAAATATATAAATACAGTTTTGTGTTTTAGAGGAGGAGATGCCTCCTCCCACATTCTTCAGCAGCCCTAATGACCTTGTGGTGCTGCTGAGTCACGATTCACAGAACAGACAGTAAATGTACATTCATCTCATGCAAGGAGGACGCTGTTTCCCACCCCACACCTCGGTCCTCTGGGCTCGCTCTGAAGGCCGTCTTCACCTGCTACAGCCTGACACGTGGCCAGGCTAGAGGACCTCCGCTGCTCAGGAAGTGTAAATACTGGCCACCGGGTTTCCAGAGCTGTTGAACTAGAAAGAACCAACCGCATTAGTACCAGTATGGAATCTGTCTTCCGCATTCCGTGCATGACTGTTGTGTCACAAACGAATCCCCTCTTATTGCCCCATCATCCCGTGCCGACTATTACAATGTATTCTGTACACAGTGG TCONS_00227172 . 3' 1939 TCONS_00227172 . 3' 2397 EMBV3_40770 CTTTGGGATTGAAGTAGCTGGTAAACAGAAAGGCACCCAGTTGGGGTTTGAAGACCTGGC Gene BVV0102_295470 + 0 NULL GK000019.2:53362250-53371116 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33636 AGATACACCCAAGTGGATGATTCTGAATGCTCTGCAGAAAACGTTTCAGTGTTGTGGCCG Gene GeneID:781222|TSPAN19:XM_002687183:66_cdna Constitutive 0 NULL GeneID:781222 5 GENE TSPAN19 NULL tetraspanin 19 EMBV3_30343 CCTACTGTTCTAGCAAGTGTGAAATATTCGCAGTGTTTTCCTCATCTGTCCTCGTAGCGG Gene GeneID:524279|LRBA:XM_002694326:70_cdna Constitutive 0 NULL GeneID:524279 17 GENE LRBA NULL LPS-responsive vesicle trafficking, beach and anchor containing EMBV3_05351 CTGGGCATGCAGCCATGTGAGAGGTCAGACAAAGTACCTGAGAACAAGAATTCCCATTCC Gene GeneID:536616|COPG2:NM_001082448:3_cdna Constitutive 0 NULL GeneID:536616 4 GENE COPG2 MGC151542 coatomer protein complex, subunit gamma 2 EMBV3_31584 ACCGGCTCCTGGTTGGAATGAAAAGGGTCTCTGGTTGCACTGAATGCAGCTCTCAAACTT Gene GeneID:100126171|DPYSL5:NM_001109964:8_cdna Constitutive 0 NULL GeneID:100126171 11 GENE DPYSL5 MGC148561 dihydropyrimidinase-like 5 EMBV3_24953 ATCGGCTACACGGCTCCGAAAAGAAGAAACAGAACATTTGGCTTTTAAGAACGCTAAAGG Gene BVV0102_358783 - 1 EMBV3_19598 GK000010.2:11344170-11349898 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015958 TCONS_00015960 TCONS_00015957 TCONS_00015959 1 XLOC_008596 Coding TCONS_00015959 XLOC_008596 Coding Coding STYX 10:11348072-11400000 j TSS11153 2752 1 TCONS_00015959_2 223 12 0.947233616423055 0.00182664393141489 0.00385623922048059 0.00246925018357833 0.00061970476348963 0.0015081364554189 2.10619917839081e-12 0.000691245852862407 0.001236320747921 3.80380847340792e-06 0.000213551872207378 5.06404274399594e-10 0.000678469826488183 4.9011432093262e-05 4.62827024612794e-09 0.00038419929191494 0.0019669829542932 0.00996047485791359 0.00143308020073606 0.00271651106381768 1.25332947928209e-05 0.000499634847019276 0.00263697642456335 0.000371021551394355 0.00285013362294955 0.000894512583361851 0.00295702633169996 0.00253501351970212 0.00060193935294632 0.000247463380291834 0.000779622641184317 XM_005193573.1 LOC101909380 PREDICTED: Bos taurus serine/threonine/tyrosine-interacting protein-like (LOC101909380), partial mRNA. 0.0 3076 100.00 0.619186046511628 NM_001130701.1 STYX Homo sapiens serine/threonine/tyrosine interacting protein (STYX), 0.0 1519 80.17 0.617369186046512 TCONS_00015959_2 sp|Q8WUJ0|STYX_HUMAN STYX_HUMAN Serine/threonine/tyrosine-interacting protein; 4e-164 457 97.31 0.995515695067265 1 noncoding 0 0 0 0 -0.030626610856273 0.820362109579612 0.00893322966154007 0.894608480207824 GGGCTCGTGTTGGTGCCAGAGCCTGGGCGGCCTGAGGGGCGCGGAAGCACGGGGGGGAGGAAGACGGCAGCAGCATGGCGGCCGGATACGAGCCGCCCAACCTTCTTCCCGGCTGTCGCGGCCGCTGTTGCCGGAGTCGCCGGGACCCTATAGTCTGCGTGTGTTAGTTGTAAGCCCGCTGCCTCCCGGTCAGTCCTCCGGTCTACCTTTCCTTTCACCGCCACTGCCTGCCCGAGGGTCGGCCGGCGGGTAACTCCCACTCCTACCCGGCCCCACCCACAAACCCGCGGGCCAGGACCATGGAGGACGTGAAGCTGGAGTTCCCCTCGCTCCCACAGTGCAAAGAAGACGCCGAGGAGTGGACCTACCCTATGAGACGAGAGATGCAGGAAATTCTGCCTGGTTTGTTTTTAGGCCCATATTCTTCTGCCATGAAAAGCAAGCTACCTATACTACAGAAACATGGAATAACTCATATAATATGTATACGACAAAATATTGAAGCAAACTTTATTAAACCCAACTTTCAACAATTATTTAGATATTTAGTCTTGGATATTGCAGATAATCCGGTTGAAAATATAATACGTTTTTTCCCCATGACAAAAGAATTTATTGATGAGAGCTTACAAAGTGGAGGAAAAGTTCTTGTCCATGGGAATGCGGGGATCTCCAGGAGTGCTGCCTTTGTTATTGCATACATTATGGAAACATTTGGAATGAAGTACAGAGATGCGTTTGCTTATGTTCAAGAAAGAAGATTTTGTATTAATCCTAATGCTGGATTTGTCCATCAACTTCAGGAATATGAAGCCATCTACCTAGCAAAATTAACAATACAGATGATGTCACCACTTCAGATAGAAAGGTCATTATCTGTTCATTCTGGCTCCACAGGCAGTTTGAAGAGAACACATGAAGAAGAAGATGATTTTGGAAACATGCAAGTGGCAGCTGCGCAGAATGGCTGATTCAAGAGCAGCATTATAGAGGATGTGAATTTCTATTTGAGGAGAAAAATACTACAGACAGTAATAATGTAAAATGTTTTATTATAAACCAAGAATTTTGGACTTGCAAAGAGGTATTATTGCAATAATGCACTTTTCATACTTGAAATTTATTTGTATGATATAAAGTTGTTACTTTAAACAAAATGCAAGTTAGGGGGGATTTGTTTATAAAATCTGGGTAATTTATAACAAAAGAATTTCCTAAAGTTTGCTAAAAATTCATTTTATGTTCTACATATTACATTTTAAAAATAATTTTACAGTTCAATTTTATGATGGAGCCTCTTACAGAAACATTAACAAATGTAGGAATCTGCCACATTTCTTTTTTAGTATAATTCAATAGTTTATCTTTTTTTAAACTTCTTGATCCCTTATTAATAATCTTTAAATCATGACAGCCAACTGTCCTTATTTTAACATGATCCAAGTATTGCTTCCTTTCCTATTACCTTCCTAATTTTATTCTGTAGAAAGAAAAAGTTTAATGAACAAAGGAAAATGTTTGCTTTATAATACCAGATGTTCACAAATACAAGGAGAGTTTTCAACTTTCAAGTGACTTTCCTTTAGCGTTCTTAAAAGCCAAATGTTCTGTTTCTTCTTTTCGGAGTCGTGTAGCCGATTTTTTCTTTGTCCAAAATGGTTCTAAATATAATAAACCAATGTAGCACTATTTTTCCTAAACAAAGCCCCAAAAAGAAAAGTGCCTTGCTTCATTAGAAAAAATAAGTAAATAAATCCTTATGACCTCTAAATTAGTATGTAGAACAGTGAAAAGTTTTGAACATTTTTCTATAATTTTTTTTAACCATAAATTAATTTAAACTGAAAGTCTTAAGGCTTGAAGAAACCTGAGTAAAATTATTTGGAATATGGAACATTTTACTCCTTCATTTTGTGTTGTCTTAATGATTCTGTGAGATTGTTCTGGCTCAGACAGTAAGTTTTCTTTGAGGATGCATTTTTTGTAGAAAAGTGATTGTGGAAGACTTCAGTGTATACAAATTAGTGTTGTAATCAGTTCTTTCTTTACATTGAGTTAATCCAAATTTCCCCCATAATTTGCATTAGCAAAGTCACTTTATGGATCCTAGGTTCTCCATGTTTTTATTTATACATATAAAAATTGTTCTTAAAAAAACATTTTTACTACTTTAAGTATGATGTTGGGGAGGAGAGGAGTGTTTTAACTTTTTATAGTTGATGATTTAGGGTAGCACGAATGAAACTCCTTTGTATTTCATTTTTCTCAGTCCTCTCTTGAGGTGCTTTACTGATGAGAGTGATTTCCATACCTTCCTTTGGTACCAAGAGGTACCCCATAAAGTAACCTATTATACCAACTTACCTACTTTGCTTTCCTCCCTAAGGTGAAGTAATACAGTAAGTTTTTTTATCCAGCATAACAGGAGAGTGGAAGTGAATCAAAACTGCTTTGTTAATTAAGCGTTAATTCTGTTGACCCAGGTGGTTTTCTTCTGATTCCTCTTCCCTTCCCCTATTTTACCACCCTAAAAACAGCATATTGTCAGTCCCTTGAGGTCTTGTATTCTGTTGTATGATTGGTGTGTTATATCATTGGGTGTGGTGGTCTAGTATAGTCAAGATTTGCATTGAGTGTTCAGAAATTCCAGTTGGTAAAGTGCCAGATAACACAGCTTCCCTGTATATAGATTACTATTGGGTAGGTCAGCAAAAATCTCTTTTGCAAACTAATAATCTATGATGCTCCTTCA EMBV3_24891 GAAAGAGTTGAGTGATAAACAGTCTTCCAGCATGTAAATGCCATTGACTTCTGACCTGAC Gene GeneID:512310|NDFIP2:XM_002691904:18_cdna Constitutive 3 NULL GeneID:512310 12 GENE NDFIP2 NULL Nedd4 family interacting protein 2 EMBV3_04403 CAAGTGCCCATAACAAAGATATTGCTTTAGGGGTGTTTGACGTGGTGGTGACGGACCCCT Gene GeneID:509111|TP53BP1:NM_001101910:196_cdna Constitutive 0 NULL GeneID:509111 21 GENE TP53BP1 MGC160112 tumor protein p53 binding protein 1 EMBV3_12395 CCTCTGCCTGGATCTAGTTGAGCCTATTGGTTCTGACTTTTCTGGGGCGTTCTTCATCCT Gene GeneID:536340|VWA3B:XM_002691167:231_cdna Constitutive 0 NULL GeneID:536340 11 GENE VWA3B NULL von Willebrand factor A domain containing 3B EMBV3_41182 CGCAGATACGAATACGACCACTGGGATGCGTTCTGTGGATCCACCATTGCCGGCCTGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31021 GGCTGTACTTGTGCTTTCAGTGGCAACACAGATCAACTATCTCAACAAGGCACTGGACAC Gene GeneID:539757|NIPAL1:XM_002688246:70_cdna Constitutive 0 NULL GeneID:539757 6 GENE NIPAL1 NPAL1 NIPA-like domain containing 1 EMBV3_17388 TCAGTGATTCCTATGTGGATGGCAGCTCTTTTGATCCCCAGCGTCGTGCTCGAGAAGCTA Gene GeneID:539515|SRRM2:XM_002697930:589_cdna Constitutive 1 NULL GeneID:539515 25 GENE SRRM2 NULL serine/arginine repetitive matrix 2 EMBV3_10749 AGAAGCTTGACTGGGGGGTTTCGCAGCCTGTTTGTGGTTTTAGCCGGATGAGAAGGCACA Gene GeneID:507361|GFOD2:NM_001014863:132_cdna Constitutive 1 NULL GeneID:507361 18 GENE GFOD2 MGC11335 glucose-fructose oxidoreductase domain containing 2 EMBV3_03344 GGTGTTAACAGCTACTCATTTCCCCAAATGCCAACGTCACAATGGAAATTAATACCATGC Gene BVT0102_164411 + 1 EMBV3_17594 GK000028.2:18361521-18363060 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160264 TCONS_00160266 TCONS_00160269 TCONS_00160270 TCONS_00160267 TCONS_00160263 TCONS_00160268 TCONS_00160265 1 XLOC_097619 Coding TCONS_00160264 XLOC_097619 Coding Coding RTKN2 28:18360843-18395660 j TSS119901 3243 1 TCONS_00160264_1 302 0.0289855072463768 5 0.906996783088235 0.000387416457688926 0.000301782723540859 0.000410431232886587 0.000644353594653394 0.000390932769531517 0.000249101194427462 0.00068875580352453 0.000251967239674491 0.000854965986375082 7.00190887599218e-05 2.46799271884811e-05 7.92801795435947e-05 3.37612249641446e-05 0.000510187162690698 0.000171317602253838 4.82598140660032e-06 0 0 2.9674880996493e-05 0.000411961624037244 0.000320371586519401 3.28823343797895e-11 4.65523378465607e-61 5.2986283150724e-25 0.000646645710518337 0.000426277831417106 0.000328819508326034 2.18718206990538e-19 1.96381373513561e-09 3.05241657344404e-05 XR_240462.1 RTKN2 PREDICTED: Bos taurus rhotekin 2 (RTKN2), transcript variant X2, 0.0 1810 100.00 0.308973172987974 NM_145307.3 RTKN2 Homo sapiens rhotekin 2 (RTKN2), transcript variant 1, mRNA. 0.0 3254 83.35 0.934628430465618 TCONS_00160264_1 sp|Q8IZC4|RTKN2_HUMAN RTKN2_HUMAN Rhotekin-2; 0.0 527 81.73 0.996688741721854 1 coding 0 1 1 1 0.0102518960843025 0.932820415279787 -0.000959149040665325 0.984727439217265 TTTATATTCAGTAAATAATTAATTATGGGCGTCAATCAATAGCTTTTTAAAAAAGATTCCATTAAGGGGAAAGAAAATTTGCATTTATACAGGGAAGTCCGTGTTCTGAGAACACAAATGGTAGGAGGTCTAATTCGTTGGAGAAGGTTGTACTGTGTTTTAAGAGGGGGTAAACTCTATTGTTTTTACACTCCAGAAGAAATTGAAGCTAAAGTGGAACCAGCTTTGATAGTGTCTATTAACAAGGAAACCAGAATTCGGGCAGTGGATAAGGATAAAACGAAAAGAATTAATAATTTCTCTGTCATCAACCCTGTTGCTGGACAGGCTGAAACTCATATATTTTCAGCTGACAATAGAGAAGATCTTCAGAAGTGGATGGAAGCCTTCTGGCAGCATTTCTTTGATCTTAGCCAATGGAAGCATTGTTGTGAAGAACTTATGAAAATTGAGATTATGTCACCACGGAAACCACCTTTGTTCTTGACAAAAGAGGCAACCTCAGTCTATCATGATATGAGCATTGATTCACCTATGAAACTTGAAAGTTTAACTGGTATAATACAAAAAAAAATTGAAGAGACAAATGGAGAGTTCCTAATTGGCCAGCATGAAGAAGCCTCATCTCCTTCTTGGGCCACACTGAAAAAGGTATTATCTCCTGCAAGCAAGCAGTTACATGAAGAGAAAGGGAAAAAGAGACGAGCTCCCCTTCCTCCTTCTGATAAAGTGCCATTCAACTTAAAAACACAGAGCAACAAAAATCAATTGGTTCAGGGCAACTGGGAAAAAACAAGTGTATCTCAGACCTCGCCTTTGGATACCAAACTGTCAACCCCAATGCATCACTTACAGAAACCGGTGGCTGCTCCTCGAAAACTTCTTCCTGCCAGGAAAAGTAGTTCAACTGATGGTGAACACACAGACACTAAAACCAGTATTGAAGCCAAGCCAGTACCAGCTCCAAGGCAGAAAACTATCAAAGACATTTTGGACCCTAGATCATGGTGGTGGACGCAAGTATAGAAAACCCTTAATGTGCAAAACATTTTACAAACCTATAACTGTGAAGCTTGATTCAGAAGCACTGTAGATATAGTGATATGAATTATGTAGGTAAATATGATAGTGACTTAAATCAATAATTAATAGGTATAAAATATTTTATAATTAGGAAATGGATTTCTCTTTTATAATTTTCAGAATTATTTCTCTAGCAGAGCATAAGAGGCAGTTTCTAGACAATATCTCAATTGTTGGAAGGGTTAATGTATTCCTAAATTAGTACTAGATGGTGAACAAGCACTAGGCAGAAGAAAGCATTAAAATTTCTTTGGGGAGAGATTGTCTAGTAATTTAAAATGTGTTAAATGAGAGCCATATTCTCATTGTGAGAATTTTAATCCTAATGGAATGTTTCAAAAGTTTCATTCAAACCACAAATTATAGAATCCACCCAAGAAGATTTCTTCTTAGCATTCTGGAATTCTCATCTAATAGTCCACTGGCTCTCATCTATTGTTTTACTCACTAGTTGACTGACCTTTCAAATTCCTGGGATAAATTTTGGAATATTAAATTCTTCATCTTTAAAGGGAATATGTAATGTGTTATTCAAAGTCGTTTCCTTGATGATCCCTGAAATGCTATTGACATTACCTTTCATATGTAAAGCAAAACATTTTTTAAGTTTAGGTAACAGGTAGATGAAATGTTCTTTACTTCCACTTTTCTATGCATGGTATTAATTTCCATTGTGACGTTGGCATTTGGGGAAATGAGTAGCTGTTAACACCTTAAAATTCATTTAATACTTATTTAAAAAGCAGATGACCTATTAAAAATACCAGAAAATTTGGCCGTGATAATTTCAGAATTAATCCTTCTAAAAATATTATTTAGATTTCCTTTTTCTAGCAGGGGTTTGTGTCTGCTATTGATATTTGTCATTAAAGTCATATTATTACAATAATGACATTGGAATCATTTCCATAGAGGTAATTTCCATAGCAACTAATCATAGTGACACAAACAGAATTATGAAATCAAGTGAGGAATAAATAGCAAAAGAATGAATACCTTAAAGGAACAAAAAAAACCTTTTTCTTAATAATTATGCTTCTTATAAATAAGAGCTGGACAGTTTTAAAAATCAGAATTTCCAAATAAAACAGTTTCCGTAAGCTGTCAGCAGCAGCACTAAAAATCTCAAATATCATTGTAAGAAATGAAAATATAAGAATTAAATTACTGCCTTGTATATAATCTCTAGAGATTTTTTAAAGCTCATAAGAACTCTATTTGAATCAGAATTATGTTATTACAAAGTAAAATGACTACTTCACAAAAAATAACATTAATTTAAATGGATCCCTTCATTATTTTTAGATAGCAGAGTCTTTTCTCATTTATGTAGCATGATGTAACTGCCAGGTTACTTTTGTGTTTGCCCAGGACTCCTAGTAAGAATTGGGACTCAAGGGAGTAGTGGTACAAAAGGTCTCTTGTGACTGGAGACACCAGGACAGACACAGCATTTGATGAGGAGGAAATCCTATATGCTTGCATGATAAAATTTAGAGACAATGAAAACCTAAAAAGGTACGATTCATTTGTTTTTTCTAACTAGAAGGCTGTCGTAAATCTCAGTTGTGATTGCCAATTCAGTAAATGACATATTAAAAACGTGAAGGATATTATTGTTTGAATTTTTATTTTTAAACCTCACTGCTGTTTTTGACAGCATTAATGACTCTTGTTGCCACTAAATTACTAAGCTAGAAGATGTGCAGGAAAAATTGTTTCTGAAACTGACATCTACGCATTCTTTTTTTGTTAAGTTAAAGCCTTCCTTAGAATAAACCAGTTTTAAAACTTCCAAATTATATTCTTGTTGTTTCTGCTTATGCATATTATTATCAAGAAGGATTCAAATGGTACAGAAACCAGAATTTGTTCTTAGAGAAATTACCTAGCAGTTGTGCCCTCAGTGGGCACTTTGAAATAAGGCTGAAGCCTTTCTTCCTAGAACCATTTAGATGAAGCCTGACCAAGGGCCATCTCCCCCAAAATTATTCAGACTGTTTCTGGGGTCCCATCTTTCTATATGTTACAAAGCCTTTAAAATCAGGTTGAAGTCTTAAGCTGTACTTCTGAGCTACTGCTCATTAAGTGTTAGTTCTTCCCACTCTCCATTCCCAGCAAAAGGTATGATACAAAGTTGGGGCTCCTTTCATCCCTCTC EMBV3_07275 CTCATGCTTGCTGGCCGGGGCACTGTTGTAGTTTATTTGCGTGTCTGATCTCATTGAACC Gene BVV0102_173384 + 1 EMBV3_34137 GK000018.2:62521683-62537350 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087524 1 XLOC_052518 Coding TCONS_00087524 XLOC_052518 Coding Coding - 18:62529713-62536032 - TSS64986 2220 2 TCONS_00087524_7 95 0.690990990990991 2 0.648939537828427 0 0 4.16846064314631e-06 0 0 0 0 0 0 1.68488516868712e-07 0 0 0 0 0 0 0 0 6.13728549736809e-05 0 0 0.000257383490929422 6.61191804705281e-05 9.06196747721975e-05 0 2.60238373792729e-05 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 2e-128 464 82.08 0.208558558558559 0 coding 0 0 0 0 0.000934047959318285 0.993486804119802 0.0252435755238062 0.603401186802527 ATGAGAGTGATGGTTACTAACTCATGCTTGCTGGCCGGGGCACTGTTGTAGTTTATTTGCGTGTCTGATCTCATTGAACCCTGGAAACAACCCGGTCAGGTGGATGTTATGAGGTTCCTCTCTGGACACTGGCAGTTATTCAGTATGCTTTGGTTTTTTGAGCACCTTCCTTGGTGACTCAGTGGTAAGGAACCTGCCTGTAAATGCAAAAGACTCCCCTTTGAGCCCTGGGTTAGGAAGATCACCTGGAGAAGGACATGGCTATTCACTCCAGTATTCTTGTCTGGACAATCCCATAGGCAGAGGAGCCTGGCGGGCTATGGTCCTTGAGGTTGCAGAGTTGGACAAGACTTAGTGACTAAACAGCAACAGCCCTGTGGCAGGCAGGATGCTTTGGGGATACAGCTGAGAGTAAAAGGGACAAAATCCCTGTGCTCAGGGTGCTGACAACCTCGTGGGGAAGCCAGACAGTAAACAAAGTACATCATGTGAAATGCCACGCTGGGGGAATCACAAGCATCAGCCTGGAGAAGTATCAACAACCTCAGAGATACAGATGATACCACTCTAATGGGCAGAAAGCAAAGAGGAACTAAAGAGCCTCTTGATAAGGGTGAAAGAGGAGAGTGAAAGAGCTGGCTTTAAAAACTCAACATTCAAAAAACTAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGGTTGGGAAACAGTGGAAACAGTGACAGACTTTATTTTCGTGGGCTCCAAAATCACAGGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTGCTCCTTGGAAGAAAAGCTATGACGAACTTAGTATATTAAAAAGCAGAGATATCACTTTGCTGTTAAAGGTCCCCATACTCAAAGCTATGGTTTTTTAGTAGTCATGTACGTACGTGAGAGTTGGACCATAAAGAAGGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCTGACTCTCTGCGACCCCATAGACGGCAGCCTAGCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCTGAGTGCCACATAATTGCTGCTTTGGAATTGTGGTGCTGGAGAAGACTCTTGAAAGTCTTTTGGACAGCAAAGAGATCAAACCAGTCAATCCTAAAGGAAATCAACCCTGAATAGTCATTGGAAAGACTGATGCTGAAGCTGAAGCTCTGATTCCTTTGGCCACCGGATGTGAAGAGCTGACCATTGGAAAAGACCCTGATGCTGGGCAGGAGGAGAAGGGGGTGATGACAGTGGATGAGATGGTTGGATGGCATCACCAACTCAGTGGACATGAGTCTGAGCAAACTCAGGGAGATAGTGAAGGACAGGGAAGCCTGGAGTGCTGCAGACCATGGAGCCCCAGAGTCAGACCCTACTTAGTGACTGGACAACAGTGCCTGCAGTGGATCAGGTGCTCCCTCTAGTGGCAGCGGCAGTGAACCGCGTTGGCTGGCTCTCATCTTGCTCCAAAACCCCAGACTGCAGGATTGACTTCGCCTTGGATAAAAACGTACTTTAGCTGCCAGAGGCTTCCTTAAATGGCTGTAAAACTGACTTCTCTGATGCGCTGCAAGATTAAATAGAACAATGCCTGATGCTGGCGACTGTGGGAGCAAATGAGCATTCTCACATACATGGGCTTGGCAAGGCTTTAGGAACTGCATCTTGGCATCATGTAGCAAGTCTTAAAAACACACCTCCCTCCAACCCAAAAGTTCACCCTCCTAGGAGCTCATCCCAGAGAAAACTACGTAAATGCTCCATGTGGCGTGCAAAAACATATTCCTCAAAGCATTATAGTGGAAAATGGGAAAACCCCAGATATCTACTGGTGGGGACCGAAATAAAAATTATGCTGCTCCTTGGACTCCAAAACTCATGAAAGATACTGAGAAGCTGTTCAAGTCTCGAGAGACACAATAACTACTTACAACACCTAATCCCAGGGTTTAGGGGGATTTTCCCAGGAGCTGAAAAGAGAATTGCTCCAAAGGACAATATTGGGACAGTTGGTGAAACTTGAACATGGACTTCATCAATGTTAAGTCCTTGATTTTTGATAACTGTACTGTAACTCTGTAAGAGAATGTCTGTGTTTTTCAGAAATGTTCCTTAGGAGCTGCTCACCCTCAACTGTCTTAAAAAATATTCATATGGGAAGAAAACTGGAAAGCAGTGTAATGAAATGCTAACAATTGGTGAGTTG TCONS_00084705 TCONS_00084706 r 5' 5896 TCONS_00084705 TCONS_00084706 r 5' 1319 EMBV3_00673 TGACCGGAAGAGAGTTCCTTTCTGTGACCCAGGCGAGCACAGTGCAGGACCGCAGGACTA Gene GeneID:507367|PDK4:NM_001101883:27_cdna Constitutive 2 NULL GeneID:507367 4 GENE PDK4 MGC166250 pyruvate dehydrogenase kinase, isozyme 4 EMBV3_30647 AAAAAGCGGGACAGGGAAGGTGGCCGACCGAATGGGGAGAAAGCTGCCAAAATACTGTTT Gene GeneID:616515|PTPRN2:XM_002686988:830_cdna Constitutive 0 NULL GeneID:616515 4 GENE PTPRN2 NULL protein tyrosine phosphatase, receptor type, N polypeptide 2 EMBV3_34590 GAAGTGAGTCCAAGGAATTCTGCCAGAAATCAATGAAAAGGAGAAAATACATGGAGATGG Gene BVV0102_350878 + 0 NULL GK000018.2:19322426-19640446 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21228 CTTCCTTCCCTGCTGGTTTTTGAGGCCCATGAGGATCCCTGCTGTTTTCTGTTTTATGTG Gene GeneID:533161|KIF2C:NM_001101147:215_cdna Constitutive 0 NULL GeneID:533161 3 GENE KIF2C NULL kinesin family member 2C EMBV3_02011 CCACCAGAGTCTGTTCAACAACCTTTAACATCCCGGGGGGACCCCAGTAGAACTCACCAC Variant GeneID:281557|TXN2:NM_174208:161_cdna 257^614 5 EMBV3_05963 GeneID:281557 5 GENE TXN2 MGC137598 thioredoxin 2 EMBV3_38144 TGTTGTTTGGTCGCTAAGTTATGTCCAACTCTTTTCGACCCCTGGACTGTAGCCCGTAGG Gene BVV0102_073613 + 0 NULL GK000029.2:41896762-41919550 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00167637 1 XLOC_102473 NonCoding TCONS_00167637 XLOC_102473 NonCoding NonCoding - 29:41901573-41902199 - TSS125615 626 2 TCONS_00167637_1 62 0.616613418530351 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.29176015022893e-06 0 0 0 0 4.00813247067033e-05 0 0 0 0 0.000454306261222991 0 0 0 0 0 0 0 XM_608560.5 DGKI PREDICTED: Bos taurus diacylglycerol kinase, iota (DGKI), mRNA. 2e-51 206 79.91 0.370607028753994 0 noncoding CTATCTATGGTTGTTTAACAGAGTTGCAGTGTTGGTGCTCTCACAGGAGGAGACGAGCACGTGCCCTACCAGAGCTGCTGTTTGGACCCGGGCCTTAGCCCCGTAGTCAAGCCCCCTGTGCCACTGGACTTGGTCTTTCCCCAGGGCCTCTAGCTTGTTGTTTTGTTGTTTGGTCGCTAAGTTATGTCCATCTCTTTTCGACCCCTGGACTGTAGCCCGTAGGGTTACAGGCTCCTCAGACCATGAGATTTCCCAGGCAGGAATACTGGAGTGGGTTGCCATTTCCAGGAACATCTCCCAGAGATCTTCCTGACCCAGGGATTGAACATGCATCTCCTGCATTGTCAGGCAGATTCTTTACCACTGAGCCACCAGGGAAGCCCACACTCTCTTGTAGCATCCTATATTTTAAAAAGGTCATGGGCCAATAACTTCAGGGACACCGGATGTGGTTGTTGAGTTGACTGATGCCAGCTGTGGCTGTTTTGAAATTTTGCAAAAGAAAAAAAAAAAAAGCAAGATCTTCATTGGGATATAAAACCTCTCCCTATTCCCCAGGGTGGGGTGGGGCAGTTTTTGAGGCACTAGCCTACTGTGTTCCCTCTTTGCCTGGCAAAGAAATAAAG TCONS_00163747 TCONS_00163748 . 3' 4811 TCONS_00163747 TCONS_00163748 . 3' 5436 EMBV3_05824 GACCGCATTGTTGAGCGCTGTAACCTGCCTGAGATGCATGTGGGTGATTGGATGCTCTTT Gene GeneID:281365|ODC1:NM_174130:15_cdna Constitutive 0 NULL GeneID:281365 11 GENE ODC1 NULL ornithine decarboxylase 1 EMBV3_03753 CACAAGCAGTGGTGGCGACTCTTCACCAAGGGGTGAAGCATCACCTCCTTCCAGCCCAAC Variant GeneID:512905|APOL3:NM_001100351:191_cdna 174^238 1 EMBV3_37288 GeneID:512905 5 GENE APOL3 NULL apolipoprotein L, 3 EMBV3_37550 CTAAGATTCCCTACAGCAGAGTCACATTGTTTTCCATAGGCATGTATGTTAACAGGCTGC Gene BVT0101_006368 + 0 NULL GK000009.2:80955957-81236012 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236052 TCONS_00236058 TCONS_00236053 TCONS_00236057 TCONS_00236051 TCONS_00236060 TCONS_00236054 TCONS_00236061 TCONS_00236049 TCONS_00236059 TCONS_00236055 TCONS_00236050 TCONS_00236047 TCONS_00236048 1 XLOC_144364 Coding TCONS_00236060 XLOC_144364 Coding Coding GPR126 9:80883414-80958890 j TSS176777 5706 1 TCONS_00236060_5 815 0.0429372590255871 21 0.924677045379265 4.31151829107863e-05 1.45429509433906e-05 3.13162951978136e-05 6.91302793425417e-14 3.11987068541864e-06 2.37781816576476e-10 7.83672224691387e-06 8.35098011793227e-42 1.019878556137e-05 2.37685698854654e-48 2.9807067204241e-42 1.45402845404514e-05 1.4633423133395e-11 0 5.56827859774294e-78 0.000110011480182363 0.00703345493734321 0.00843593390422366 3.77015592476927e-05 1.03656491131775e-05 1.30364941130491e-11 0.000965392345433966 0.00360086380254124 0.00422048916471433 5.21529255967365e-15 4.34963761907502e-11 3.27047370377305e-10 7.65720133300627e-05 0.000187240428272891 0.000276319765364375 XM_614057.7 GPR126 PREDICTED: Bos taurus G protein-coupled receptor 126 (GPR126), 0.0 9750 99.06 0.970206799859797 NM_001032395.2 GPR126 Homo sapiens G protein-coupled receptor 126 (GPR126), transcript 0.0 3259 83.92 0.533298282509639 TCONS_00236060_5 sp|Q86SQ4|GP126_HUMAN GP126_HUMAN G-protein coupled receptor 126; 0.0 1261 85.25 0.938650306748466 2 coding 0 0 0 0 -0.100325024948046 0.523589019690068 0.0267859026396884 0.617004932354763 AATCAAACCAGGGTCTCCTGCATTGCAGACAGGATTCTTTACTAATTGAGCTATCAGAGAAGCCCATGATTCAGTTTTAGGTGGCTAACGTCCATCAATTTTCACAAAGAACAGACTGTGCCTTCTATACCAGTTTTATTTATTTTACTGATGACTGGACTTTCCTGAGGAGTGGTTCCTACCTGATTCCACTCCCAGCAGCAGAGCTAGCCAGCTGTGCAGATTTGGGGACCCTCTGCCAAGCTACTGTAAACCCTCCTAGTACTACATCACCCACTGTCACCACTAACATGCCTGTTACTAACAGAACCGATAAACAAAGGAATGCTCAATTCAACCTTCCAGAATTGGAACTACACTGTTTACGTGGTTAATATCAGTTTTCACCTGAGCACTGGAGAGGACAAGATTAAAGTGAGGAGAAGCGTTGTGACTGACCAAAGGTTGGTGATTTTGGCCCTTTTGGTTTATAATGCTACCAACAATCCCACATTAGAAGGAAGAACCATTCAGCAGAAGCTTTTAAGAAATAATGAGTCCCTGGATGAGGGCTTGAGGCTACATAAAGTGAATGTGAGACAACTGGGTGTATGTCATGCTGATGAGAAACCCAAAGGCTATAAATGGCCAAGCATCCAACCTTCTGAGTACAGAACTCCCTGTCTAGGGAAACCGGGCTTCTTTGCTTCACGAACATGTTATGATGACCCTAACAACACTTCTGTAGCCATCTGGGGGCTTCCCGATATCTCCAATTGCTCAAGGGAAGCAAATGAAGTTGCCAATGAGATTTTAAATTTAACTAGTGATGGGCAGACATTAAGCTCGGCCAATATCACCAGCATCGTAGAAAAGGTCAAAAGGATTGTAAATGAAAAAGAAAACATTGATATAACGCTTGGCTCAACCTTAATGAATATATTTTCCAATATTTTAACCAGCCCAGACAGTGATTTGCTTGAGTCGTCTTCTGAAGCTTTAAAAACAATTGATGAATTGGCCTTCAAGATAGACCTACAGAGCACAACACACATGAATATCACAACTCAGAATCTGGCTCTTGGAGTATCATCTGTGTCCCCAGAGACCAATGAAGTTTCAAATTTTAGCATTGGTCTTCCAAGCAATAATGAATCATACTTCCAGATGGATTTTAAAAGTGGACAAATGGATCCTTTGGCTTCTGTCATTTTGCCTCCGAACTTACTAAAGAACCTAAGTGAAGAGGATTCTGTATTAGTTAAAAGAGCACAATTTACTTTCTTCAATAAAACTGGACTTTTCCAGGATGTAGGAACCAAGAAAGGCACCTTAGTGAGCTATGTGATGGCATGCAGTATTGGAAACATTACTATCCAGGGTCTGAAGGATCCTGTTCAGATAAAGATCAAACACACAAGAACTCAGGCAATGGCTCATCCCATCTGTGCCTTCTGGGATTTGAACAAAAATGAAAGTTCTGGATTTTGGAACACTTCAGGATGTGTCGCACACAAAGATTCAGATGCCAATGAGACAGTCTGCCTGTGTAACCACCTCACCCACTTTGGGGTTCTGATGGACCTTCAAGGAACTGCTTCACAGTTGGATGCAAAAAACACTAAAATCCTCACCTTCATTACCTATATTGGGTGTGGAATATCTGCCATCTTTTCAGCAGCTACCCTCCTGACATATGTTGCTTTTGAAAAATTACGAAGGGATTATCCCTCCAAAATCCTGATGAACCTCAGCACAGCCCTGCTGTTCCTGAATCTCGTCTTCCTCCTGGACAGGTGGATCACCTCATTTCATGTGGATGGACTTTGCACAGCCATCGCAGCCCTCCTGCACTTCTTCCTTCTAGCTGCCTTTACCTGGATGGGACTAGAAGCGATTCACATGTATATTGCTCTGGTGAAAGTATTTAACACTTATATTCGTCGGTACATCCTGAAATTCTGCATCGTTGGCTGGGGTGTGCCTATCTTAGTTGTGTCCATTGTTCTAGCGAGCAGAAAGCAAAATGAAGTCTATGGAAAAAAGAGTTACGGAAGAGAACAAGGTGATGAATTCTGTTGGATACAGGATCCTGTCGTATTTTACGTGACCTGCGCCGGGTATTTCGGACTCATGTTTTTCCTGAACGTCGCCATGTTCATTGTGGTGATGGTGCAGATCTGTGGGAGGAACGGCAAGAGAAGCAGCCGGACGCTGCGTGAGGAGGTTCTCCGGAACCTGCGTAGCGTGGTCAGCCTGACGTTTCTCCTGGGCATGACGTGGGGGTTTTCTTTCTTTGCCTGGGGACCTTTGAATGTCCCCTTCATGTACCTCTTCTCCATCTTCAACTCGTTACAAGGCTTATTTATATTTATCTTCCACTGTGCTATGAAGGAGAATGTTCAGAAACAGTGGAGACGGCATCTCTGCTGTGGTAGATTTCGGTTGGCAGACAACTCAGATTGGAGTAAGACAGCTACCAATATCATCAAGAAAAGTTCTGATAATCTAGGAAAATCTTTGTCCTCCAGCTCCATTGGTTCTAACTCAACCTACCTTACATCCAAGTCTAAATCCAGCTCTACCACTTACTTCAAAAGGAACAGCCACACCGACAATGCTTCCATGGACAAGTCCTCATCAAAACTGACTCATGCTGATGGAGAACAAACATCGATCATTCCTGTCCATCAGGTCATTGATAAGGTCAAGGGTTATTGCAATGCTCATTCAGATAATTTCTATAAAAATATTATCATGTCAGACACTTTCAGCCACAGCACAAAGTTTTGATATCTTTAATATAAGAAAGAGGAATCAGTCTGCACAAACATGAAGATGTGCAAGCATCAGACTCTTAACTAGCAGATGTAAACGTGGTCTTACCTAGGTAACTGCATATATATGACCAGAGTGTTTTGTGAAGAAGGCATTTGTGAAATTCACTATCTGTCTTTTCAGTGTGTTTCTTCCATGGGGGAGTTTCCACCATCACTAAAACGTCACTACTGAGAGCAGCATGATTCAGTACCCACAGGGGATAGGGTTTTTTAAATATATAATCGAATTGACCAATCAGAACTTGGGCTGGGAGGTGGAATATTAAGGTTAGAGGACAAGGGACAGGCCAGGCTATGGAAAAGTTTAGTTTAGAGTTTATTCACACTCCACCTAATAATTAGGTTTGGATATGGCCATTTGCTCCATCATCTTTCTCAACAAGCAAAAGCATACTAATAGGGACTTCCCTGGTGGATCCACTGGTGAGGACTTTGCCTTCCAACATGGGGGGTGAGGGTGGGGTGTGGATTCGATCCCTAGTCAGGGAGCTAAGATTCCCCATGCCTCACAGTCAAAACATAAAACAGAAACAATATTGAAACAAATTCAATAAAGACTTTTAAGAGTCCACATCCAAAAAATCTTTAAAAAAGCATACTAATATTTAAAACTATTTTGGATGCCTACAAGTCCCGTCTCTGCTAGTTTCCCTGAATACAGTAGCATTTCCTCTTTTAACTACAGAGACAAAAGAATGATGTCTGACAAAGTTCAGAAAGGTGGATCTTCCATTATCGCAAATATTTAACCATGAAGAGCACTATGTGCCTAAGAAAGAAAGAATTTCACAAATTTTGACCTGGTTAATACGAACTCATGCTGTTCCATTTATCCTATTCAAGACACGACTTAAACATCATTGTTAATTATAATTTAATCCTATACTTTCGAATCAAATTTAGTGTTGGGGTTTCATTACAGTGGACCTCACAGCAGTTGAAGAATGAACTTCTTACACCTCTATTTTTGATCCTCTACTGTATATTGAGCCATGGGTTCATGGGAGGAATGGAATTTCCATTAGGCATGCTGTGTACAACAGTCTTGCCCTTTTGGGAAAAACAACTATTGAGACTCTATGGTCTTGTCATAGCTCCAGAGACTTTTAAGATATTTCCATTTGCACAAATGAAAAGCCTCTTACTTCCTCTTTCAAGAGTTTTGTTCCAAAGAATATAAACTGAGACTTAGGTGGGTGACTTATCATAATCAAAATAATATATAAACATGTGGGTCTACACTTACCAGTCTGAAAACTATTTGTATATAGGTCCTCTGATTATGAGAGCCAGAGGAGATCTGGCAAGATAGATGGGGTGTTATTTATGGATTAGATTTCTGCATATAAGCCATGCATAATATTAAGCAGCTTTTAGCCTAACTTTCAGACTATCCTGAGTAATGTGCTTGCTAGTGAATGTATAGGAGACTACATTTTAATTGTTCTTAAATGATGGATGAGTGTCCAGTTTCTTAGAAATTGATCTCAATATGTGCTGTACCTTTACATTTGCTCTGAGTTATCTGAGATGTTTCAGGTTCTGGAAGCAGCCTAAGTGAGAAGATGAGACATTCTGGCAGAACGAAACTGCTTAAAGGCAGAAGCCAGACTGAGCACCTGGGGACCTTTCCCTCTGTGCCGGAAGCAGGTAGCCCTTAGTTGGAGACATAGGAAAGCTCTCAGACTGCACAGCAACCAAGGGACGTCTCACCTTCCGCTCATCCTCAGTCATGAAGGTTTTTGGCAAACCCAAACAGGTGATGATGTGGTAATAAGTTTTCATACCATTCCATTTTGTAGCATCCTGGAACCCTGTTCTGGGAGATAAAAGCATGGCTCAGCCTGGCCTTCCCAGGAGAAGGGTACAGACAGAAGGGAAAGATAGTAAATCTGAGGTTACTAAGATTCCCTACAGCAGAGTCACATTGTTTTCCATAGGCATGTATGTTAACAGGCTGCTATTTGGGCAGAGGTTACATCTAGATGAAAGTTAACTAGTCACTGAATCTTCATATACTCTCCTCCAAGCCTTAGAGATGATAGAATTTAATTAGCTTTCAACTGTGAGATTTCTACCCAAAGTGCTTATGTAGTTATGAGTAATTAAAGTGAGAACTTTAAAAATATCTTTGGTTTCTACTCATATTCATGCAGATCTTGGAAAAATGTTTTTTTCATATTTGACAACAGTATCAGCTCCACTTTAGAAATTTCGAGTAATCGGGTAAGGATAAAAAAAAAAAAAAATGGAGAAACAGCTGAATAGAAACATTTGCAAGTGGACTTGAGTTCTACACATGTAGTTCTCACCTTCATTTAGCCCCCTCAGAACAGAACTTCAGGAATTTAGCTCTGGAGCCAAAATTATTTTAGCCTAACTTTGAGAATAATATCAACTTAAGACTCTCTGGGGTTGGAAGAGAGTTGAAAAAGAGTTTCAGTTTTTGTTGTTTTTTAATTTTCCTCATTTTCCTTTTTGTAAACTGCATTATGTTAGAGTCAGTCTAGGATCCCGATATGTTTTCCATTGTTGTCACCATGACGTGCATTGTAAAGCTTTGTTTGTTTAATGTTGGCATAGACTCTTTTGTACATATTTATTTATTTGTGTTTATAAATGTGAGCTTGTTTTATATCTTACCTTTATATTGCCTGGCTTTGTTATTTTAATTAACTTTCTATCAGAGAGACTGTATATATTTTTTTCTAAATACTTTGTGAAAGAGTTTTCTGTAGCAGTATCTCTGAATTTGATGAATAAAAAATGACTGTGAGTGCAGATTAGAATAAGCAGTAAAGAAGCTACTATAGCTGATTTGCCGTTTTACTTAAATGGAAAATGTTTTTCAAATAAATGCCTATGTTGTTTGTGATCCAAATTATTG EMBV3_30483 GATAGAAGCTGCTGTACCTAGGACCCTTCTGGAACTCACCCTGTGAACGTCTTTATCTGG Gene BVV0102_094126 + 0 NULL GK000026.2:39509864-39555131 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152354 TCONS_00152351 TCONS_00152355 TCONS_00152356 TCONS_00152350 TCONS_00152352 TCONS_00152353 1 XLOC_092316 NonCoding TCONS_00152355 XLOC_092316 NonCoding NonCoding - 26:39527467-39536103 - TSS113650 996 3 TCONS_00152355_5 74 0.493975903614458 4 0.885118702953098 1.61795200862148e-08 0.000785145055821439 0.00117764547160771 0.000290116972195652 0.000155260500355068 0.000119293757464984 0.000391905217445608 0.000182086793259522 4.19276122977143e-05 5.7745829083832e-99 2.71662956040184e-125 6.37210720294371e-17 1.07581619815821e-35 4.52462761793434e-40 3.87000748298304e-41 1.65916639431175e-31 6.95802485520512e-42 9.90440315969173e-11 0.000636324840440583 0.00033502907202538 1.80060066042457e-38 7.70402008936668e-41 8.09660284589375e-34 9.79754480310758e-17 0.000240261266435973 0.000127918290554604 0.00041921995003669 5.89077740762395e-05 3.62285374166005e-08 0.000282401482588186 XM_003582909.2 LOC100848034 PREDICTED: Bos taurus MAM and LDL-receptor class A domain-containing protein C10orf112-like (LOC100848034), mRNA. 5e-24 116 78.47 0.143574297188755 0 noncoding TGAGAGCTTTGGGGTTGGTGAACAAGAACACAGCAGGTTTGGGACTTCCCTGGCAGTCCAGTGGTTAAGATTCCGCACTTCCAAAGCAGGGGCTGCAGGTTCAATCCCTGGTCGGGGAAGTAAGATCCCACAGGCTGCATTTCGTGACCAAAATAAAAAAATAAAAAGAACACAGCTTGTGTCAGAGGGTTTCACACCCCAAACTCCCCTGAGATAGAAGCTGCTGTACCCAGGACCCTTCTGGAACTCACCCTGTGAATGTCTTTATCTGGCTGTTCATTTGTATCCTTTGTAATTAACCAGTAGTTGAGTAAGTAAACGCTTTTCCTGAGTTCTGTGAACTACTGAAGCACATGTGCGCTGCGACGCTTCAGTCGTGTCCGACTCTGCGACCTCATGGACTGTGGTCCATCAGACTCCCCGTCCACGGGGTTCTCCAGTCTCCTGAGATCTGAGTTGGGGAAGAAGACGGTGAGGGAGAGGGGGTCTCGATATCTGACAGGAAGCAGGAAGCTGGAGCTTGAGGAGAATTATGTCCCTGCCTTGGGGCTGGTTGTTGACCGAAGCCAGGACAGAAGGAGCAGCCCCTTGCTGGGATCTCCCATTCGATGAGACCAACCAGAAATGGAGATGCTGGACTAGGTGGAGAGGCTGAAGAAAGTAACCAAGCAGTGGGGCTTCTGTGGATGCAGCCTGCATTTCCCCCTGAGCAACGGCTGGTACGAAGCCCAGCAGCCCATTTTCACGATCCTGCTGCCTCTGTTTAATCAGAAAATGTCCCTGTCCTGGACAACTTGGTGTGTGGCTTTATTTCCAACTGGATGCCTCCTTTTCTCTAAACGTGAAGCGCCTGAACAGCCCCACATTTGGGGTAACTGTCCCTTGCTCTTTGCTTGTATTTCCCTGTCCTTGAAAGAGCCATTTTCCAGGACTGTCACTAATGGATCTTCACGCAATGACAATAAAATATCCCAGCGCTCGAGAAAAGAAAGGAGA TCONS_00150990 TCONS_00150991 r 5' 27144 TCONS_00150990 TCONS_00150991 r 5' 18920 EMBV3_17885 CGGTGTGCATTATCCTTCCAGAATGTAACCAAGCTCTCCAACAATCACTCTGAAATGAGC Gene GeneID:100139635|PPFIA1:XM_002699424:95_cdna Constitutive 1 NULL GeneID:100139635 29 GENE PPFIA1 NULL protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 EMBV3_38307 CAGTCTGCAAGAACTAGCCCTTTGATCTGTGATGCTTTCAATTCTATAAAGTGCCAGGCT Gene GeneID:527014|SV2B:NM_001083448:29_cdna Constitutive 2 NULL GeneID:527014 21 GENE SV2B MGC139563 synaptic vesicle glycoprotein 2B EMBV3_02293 GAGCACTTCACTATCAAAAATACCAATATCACATGGCTTGAAGAACCACCATCAGAGCTG Gene GeneID:512444|GNS:NM_001075562:1001_cdna Constitutive 2 NULL GeneID:512444 5 GENE GNS G6S MGC137372 glucosamine (N-acetyl)-6-sulfatase EMBV3_02366 GAGGCATCTTACAGATTTTGCCCCTTTTATGAGGATGTGATAGTTGCTGCCAATGAGGGG Gene GeneID:539090|SPRY2:NM_001076147:4_cdna Constitutive 0 NULL GeneID:539090 12 GENE SPRY2 MGC139477 sprouty homolog 2 (Drosophila) EMBV3_04224 GGGCTTCCTCACAGACTTGACCCTGGACGACATCCTGTTCGCCGACATTGACACGTCCAT Gene GeneID:786476|SERTAD2:XM_002691388:280_cdna Constitutive 0 NULL GeneID:786476 11 GENE SERTAD2 NULL SERTA domain containing 2 EMBV3_07964 AAGAATGGCTTAGAGCGAAAGGAAAATGCCCCACACTTTGAAATAGGGAGGAGGGGGAGC Gene GeneID:618459|LOC618459:XM_002695711:320_cdna Constitutive 0 NULL GeneID:618459 19 GENE LOC618459 NULL similar to Protein FAM101B EMBV3_32787 TGCGCCAGGGCAGCTCCCTCAGCGTCTTTGGGTCTTCTTTCACCCAAAAAGAATACAAAA Gene GeneID:512213|COG2:NM_001076839:17_cdna Constitutive 1 NULL GeneID:512213 28 GENE COG2 MGC139920 component of oligomeric golgi complex 2 EMBV3_00734 TGTAATGCAGATAATAGCAAGACGGGAGCGAGTAAAGGAGGGATCCTGTCAAAGGCCTGC Gene GeneID:407240|USF2:NM_001001162:532_cdna Constitutive 2 NULL GeneID:407240 18 GENE USF2 NULL upstream transcription factor 2, c-fos interacting EMBV3_02088 CTTTGTGCAGCTCATAAAACACCGAAAGAGAATGAAACATTTTTGTGTCATCGGTTTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27072 GGCTACTGACTACCACACCAAATGGATAGTGGATTGCTTAGCTGCTCTTCAGAAATTGGC Gene BVT0102_016573 + 0 NULL GK000008.2:86868054-86884871 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233272 1 XLOC_142754 NonCoding TCONS_00233272 XLOC_142754 NonCoding NonCoding - 8:86876945-86884579 - TSS174776 7634 1 TCONS_00233272_14 186 0.319229761592874 1 0 0 0 6.06103587799227e-07 5.43892976295217e-07 0 0 4.58348071706996e-06 5.42350917378323e-06 7.2348611619822e-06 1.50911128155848e-05 2.39893689649602e-06 1.17097361565452e-05 8.26883814795007e-06 4.62142281593238e-05 4.49874041813866e-06 0.000598533803393038 0.000226177242545903 0.000513060191709361 0 0 0 0.000240347411202586 0.000327473891472759 0.000472150800796436 0 1.84581352923729e-07 1.07451038697414e-05 0.000184579601886492 5.08735319201748e-06 0.000356765524467217 NM_174233.2 AGTR1 Bos taurus angiotensin II receptor, type 1 (AGTR1), mRNA. 0.0 751 87.75 0.0776788053445114 0 noncoding 0 0 0 0 0.0441934379449231 0.783163200320082 -0.00464691102160109 0.927360455649957 GTGGCCAGCATGCATTTTAATCACTTAATGTTTTTAAATCTGGAGAAGCTTTTATTTAGACAGTAAAAGCTCTTCACCCCAGAATATTAACTGATGAATGATTTTTCCATGTACATGCCCAGGTGGCGCTAGTGGTAAAGAATCTGCCTGCCAGTGCAGGAGACAATAAGAGACGTGGGTTCGATCCTTGGGTCTGAAACATCCCCTGGAGGAGGGCATGGCAAGCCACTCCAGTATGCTTGCCTGGAGAACCCACGGACTGAGGAGGCTGGTGGGCTCCATTGGATCGCAGAGAATCAGACACAACTGAAGCCACTTAGCACAGCACAGGATGAGAATTTGGATCCCCAGCAATGAGTTGTCAACATTGCCCTAATGTGACCTCGGGTGAAATAAAGAAGGCTTGATCACTGTATGATCTTTGACTGTGGGTGTACTAAACATTGCACAGTCACTTAGGATAAAAAGAGAGCTACTGGCTTTTTTATTTTGCTTTATATTAAGTCTTTGAAATCCAGAGTGTCTTTTACGGTAACAGCACATCTCATTTGGAGCTAGTCACATTTCTGGTGCTCGAGTGACATGTGGCTACTGACTACCACACCAAATGGATAGTGGATTGCTTAGCTGCTCTTCAGAAATTGGCTTTCTCTGGCTAAGTGTGTTTCAGATTATCAGCTGAAAATGTCCCCTCTGTCTGTGGCCTCATCTCAAATGTGAGGCAGTTTCATCAGTTGATTTCTTAGGCTCTTTCTGGGTATAAGATTTAAGGACTCTGAGGCAGATGACAACTATGCTTTCATTAAGTATCACTTTTGCTTCTCTAGGAATGTTTTAGGAGATTTTGAATGATTTGTTTTAAAATAGCAGATATTAATGATGATGTTCCTTTAATCTGCTTTTTCTGCTTTGTGCCAGTATTCATTATGAAGTTAAACTACTTGTTCACTTGGCCGTTTCTTCCCTTCTCCCCAGTTTTTTAGTCAGTTATAGAATATTTTTCTTGTACATTGTAGACTAAGGATACGGTTGGTTATAGTAAACTGGGGAATCTGGATTTAATGACAAGAAGCCACCTTTTCTTGACTTTGGGGATTGTGTGAATTAAACGGTGACTTTTCAACCTGGGTACATATCAGTATAATTAAGGATAGGAAGGTCGAATATGATAGGATTGAGAAATAATTGTGTATATATAAGGACCACTAAGCAGAACAAGTCACCCAAGTGGAGTACTCTGCTTTACCCGAAATTTTTGTGTGCATTATAGGGTGTGTAGCAGAATATAGGGAGGTAGCTTAGAATGTACTTAACAGCAGGGATGTTGGCCCTAGATTAACAATTTGCATTGCAGAATCTTCAGAGGAATATTGGGAATTGAACTGACATTTTTTTAAATTTCAGAATTTAGATAGTTTCATCTAATCTAGAATGCCTTATGTTGTGTGTCTAAGTGAATGAAAGGAAATGGTCCTTTTGGAAAACATGACCTAGTACTTAGCTTTTAAAACTTAACATGAGTCTCAACATGAGTCTCAGGCTTAGTGCAGTATTTGGTAGGATAACAAATTTAGTGGATGTAGCTAGATTACTGTGGTGATCATTTCACAGTTATACAATAACAAATTACATTGTACACCTGGAACTAATACAATGGTATATGTCAATTATACCTCCATTTAAAAAAATTCAGCCCCTCTCAAAAAAGAAATTAAGATCTTAGATTAAAAGTGGGTTAATTTTGTTAGTAAAACTTAGTTATAGCCAAAAACTTAATCTTGTCAATTTCACTTGTCAACTTAACCTTGATGGGGCAATCCATGGCTAAAAATAATGCCTATATTCTGTCAAAGGAATCAAAATACAATTGGAGAATTTGTATATGTATTTATGTTTAAATATTCAGCCATCATCATCAGATAATTTTATTAATATTCAACTGAGTGTTTGAAGGAAATTGTATTAAGTAACCAGTGTTCTAATTTTGATTTGTGTTTATCATCAAGTGAAACTTGGTGATGAGACTAAAGGAAATGCTTCGTTGTATTTGTATAAAAGTTTGACCAAAAAAAAAAAAAATGTTTAGTCACCTGTAAGATGGCATGTAAATGGAGATGGAAATATGTAAAAAGTAGAACTTTAATGAGCTACTTTGTTTATAGGAGTATGTAAATATAAAAGGTGAGAATATTAGATTGCTGGAGAAAACAACATTTTAGCTCAGAATATCAAAGTGTTAATAGATATTAAGTATGTAGAAAAGATGGGGTATGCCTGTGTTTGGACTAAGTAGGAAAATTGATAAATGCAAAGGTGGTATTGATATATTTTAATTAATATGTAGCCTTTAGAATATATATTCAAATGTGTTTTTAATGCCATGGCAGTTAACATTCTTTTGGTTATAGACTTTTTTGCAGATGTGGCAAAAGCTATGGAAACTTGCAGAGAAATTGTATATACAATTTCTGGTGGTTACTGAAGCTGGTTATGGATGCAAGTTAAGAACTCTGGCCAAAGTTGACTATACAAGTATATTAAACTATATGATGTCATACATTATCGTTTACCAAGATATAAGTGAATATTAAAAGTGTTAGAAACTTTTATATAAATATAGATAAACATAAATAAGTAGATTGCCTTTTCACAGGACATTTTTAATTGATGCATGATTTAACTGAAGATAAGTATTTTTGACTGTCACAAGTATACCCAAGAAGGTAAAATAACTGTCTTGCTGTGCGCTGTGTTCAATTGTGTCGAACTCTTTGTGATCCTTTGGACTGTAGCCCACTAGGCTCCTCTGTCCATGGTATTTTTCAGGCAAGAATATTGGCATGGGTTGCCATTTTCTCCTCTAGGGGATCTTCCCAACCCAGGGATTGTACTTGCGTCTCCTGTGTTGCAGGTGGAGTCTTAGTTTTTTTAGTTTCTCAAATAGGTTTAATTTATTAAGAAAAATGGTTACCATTTGTTGAGTATGTCAGCTAAGATGTCATTAAGATGGATCACTGAGATGATCTGTGTGTGTTCCTAATCTTCAGAACAATCCTGTGAGGTGTGGATGTTAGGTTCCAACTGGAGATGAGAACTAAACCTCAAGGAGGTTATTTAACTTGAAAAAGAACACAGCTGCCACGTAGTTGCCTGACCTATAAACTCCTTTCCTGTACTGCCATGTTGCACAGAAACATTTTGTGCAAGTTGAGTTGAGACTTTTGGTCACTAGGGTATTTAATGGGGAGGGGAGGAGTTCAAGCTCCAGACTGAGGTAGTAAGTGAACAGGATAGAAAATGCATGTAAAATTGTGTTACTGTTAAAAAAGAAAATATGTAAAAGGTCACATTCGGATAGTTTTAGCTGATAGTCTTGTCTAAGAATGTTTTAGAATTGTCTAATACTGATGGTTGTAGCTGAAAGTTATTGAGCATCCACTCTGCACTTGGTATACTTTGTGGTTTTTGTATTTTATTTCTAATTCCTCTTAACATCCCTGTAAGATTTGTCTGATTTTTATGAGTTGAAATAACAAAAGCTGAGAGATTATCACTTGATGTGTCTGAAGACAAGGTAAATGAGAAACCGGGATTCAAACTGGATCTCTGATTCTGAAATACGCTTTAGAGGGAAAATCTTAAGGAATGAAAACACGTTAGTCAGCTACATAACTTCTTTCTCCAGCCAAAGATTGTATAGTTGTGATCAGTGTGTATGTTGAGTTTTATTTAACCTTATTTCTTAGTGAACATTCCCATGGGTTCTTAAAATCCATAAATTCTAGTTTATGGATTGTATTCTGAAAGCTTGCTTAACTAAACATTGCTTCCTCTTTGCTATTAGATTTTAGTTTCCAAAATTTGCTGTAATCAGAGTTAATCTGAAAAACTGAAGATTGAAAACCATCAGTGGATCATAAAGTCAATATATGTGTATAATAATGTATAAAATAAAAGAGTAGGAGTTAGTGTTCATTTGTGAACAGTATTGAATATTAGTATCTTACTATATTAGTTTAGTATTTGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCTACCTGACAGTGCAGCAGACATGGGTTCAGTCCTTGGGTTGGGAAGGAGAAAATGGCAACCCATTCCAGTATTCTTGCCGGAAAAATCCCATGGACAGAGGAGTCCGAAGTGTTGCAAAGAGTTGACACAAATGAGCACAGCACAGAGTCAGAGATGACTTGGTGACTAAAGCAACCGTAATACTAGTATTTAGTGTTACATATGTATAGACGTGTATGTGTGCTGTTAAGTCACTTCAGTCGTGTCCGACTGTGTGAACCCACAGATGGCAGCCCACCAGGCTTCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAACGCATAAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGCCGTGTCCTACTCTAGCGACCCCATAGATTGCAGCCTACCAGGCTCCTCTGTCCATGGGATTTTCTAGGCAAAAGTACTGGAGTGGGGTGCCATTGCCTTCTCTGGTGTATGTGTGAGTACTGTTTAAAAATACAAAATATTTTTCTTGTGAATTATGAATGGTGATGCTACATAGTAGATACCTGTTCGCTGTGCTGCTCACCCATAAACTCCCAACTTAAATAGTATGAAATAAGCAGGCCACACTTGCCAGAGTTGAAAAATGAATACATTTTTAGATTCAGTGTTTATTTAATCTTAGATTCCTATGTTTGATGAAGATTCAGACGTTTTAGATGAGAAAACTGGGCTGGGCTTGAGGGTTGTGGTAGAGGTATCAGCTGGTTTTACTGTTGGCTGTCATTTTAAAAGTAAGGACTATGCTGGTTCAGTATTCTCACTTACTGATACTTATATTTAAGATATGGCATTGTATATTGCATTATTACCCTTCATAGTAGACCTAAAATGAGAAGATGAATTTGTTCATTAATTTTCCAGATGATAGATGTGAAATGATGCTTCAGAAAGTTGTCTTTATGTAAGTCCTTGTGTGTGAATGTACATGTATTTGGACATAGATTTTAAGGTATAAACTGGCTCTTTTAGAATACACCTGCCATCTGAAAATGGGAAGTTGGCACCTGAGATCTGCTGAAGAGTCGAAGAACTTGATGCAGGGTTTTTTTTTTAACCCCCACTGAAGTTAATAATGAATTTTTAATTTTAAAAATATATATTCAAAATTCATGTATTGGATTTTGAAAACTTTATTAAAAGTTAAGAAAACAGTAGATATGTACTCAAATTTTCAAGCCCATTACTTGTTATATTCTGCCAAAAATGGAATGGAGTGGGAGATGTAAACTGTTCTGTCTGGACCAGTCTGTCTGACTGTTCTGTCATGGACCAGTATTTGGATTCATTCCTTGGGTTGGGAAGATCCTTAGGGGGAGAAAATGGCAACCCACTGCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCGGGCTACAGTCCATGGGGTTGCAAAGAGTGAGACATGACTAGGCGACTTAATACAACACTTGCTGGTTCTGGAGAAAGATCAGTTCAGTTTAGTTCAGTCGCTCAGTCGTGTCCGACTCTACGACCCCATGAATTCGCAGCATGCCAGGCCTCCTTGTCTATCAGCAACTCCCGGAGTTCACCCAAACTCATATGCATCGAGTCCACCCAAACTCATATGCATCGAGTCGTTGATACCATCCAGCCATCTCATTCCCTGTCATTCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGGGTCTTTTCCATTGAGTCAGCTCTTTGCATGAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTAGATCTCCTTGCAGTCCAAGGGACCCGCAAGAGTATTCTCCAGCACCACAGTTCAAAAGCATTAGTACTTTGGCGCTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAATCCATAGCTTTGACTAGATGGACCTTTGTTGGCAAAGTAATATCTCTGCTTTTGAATATGCTATCTAGATTGGTCATAACTTTCCTTCCAAGGAGTAAGCATCTTTTAATTTCATGGCTGCAATCACCATCTAGTGGCTTGTAAAGCCCTGACTTTTTAGGGGCGGTTTTTTGCATGTTCATGCCTGAATCATCATCTGGCCTTGTAGAATTGAAATAGGCTCAGATATGATAAGTTTGGAGATCTCAATAATTTGGAACAGGTTATTAAACTTCTTGGCACCAGTTTCCACCTATGTAAAACAGAGATGATATGACTTACATAAGATGGCACACATGAAGGGGCTTAATGTTGGGCCATATGTATATCGAGGGTGTGGTAAATCTTTTTCCCTTACCATTACAGATGATTTAGTCCAATTGATGTTACAGAGACCTTAGAAAAGCTTAAGTTACTTGCACATGGCTTCAGTGGCAGTGAGTAGGTTGGGCCAGGGTTTGAACCTTGACTTTTGTTGACTCCAAATGCTGTGAACATTTCATATACAAGTTTTGTGTCTAATTTTCTTAGGAATATAACTATGAGTGGAATTAACTTTCTGATGAACTGCTAAACTTTCCAAAGCACCTGACCCATTTTACATTCCAACCGTAGTTGGGAATATAATTTCTCTATATCCTCAATAATGCTTCCTTTGTTTCTGTTCTCTTTTGATTATGGCCATCCTAATGGATCTGAAAGTGCTGTCCCATTATGATTCAGGTTTCCCTAATGAGTAATAAATGATGTTGAGTGTCTCTCTATGTACTTTTTGGCCATTTTTTGCTTATTGATCATATCTTTGGAGAAATGGCTATTCTTTACCCTTCTTTAAAATAAGTTACTTATTTTAAGTTACTTAAATATGGTGGGGACCCAGATTTATTCTCTTTGCGTGTGGGTATTCAGTTGTCCCAGCACTGTTTGCTGAAAATTATTCTTTCTCCATTGAATTGTTGTGGCACTCTTGTTGAAAATTGGTTGACCCAATGTATAGGGGTTACTTCTGAACTTTCAATTCTAATAACATGGAGCTGTATGTCATAAAAATGGTTTTGATTATAGGTTTTGGTTGTTAGTAAGTCACCACTCAGTAATTTTCCTTGACATTAAATTTGGTGCATTCCTTAACAAATCAAGAAATCTTTGTGGTAGCTGTCTGTTAAGTATGAAATAAGTAAATTGAAGACTGATGTTTAATATGATTTAGCTTTGTAAGATCTAGATTATAAAACTAAGCTGATCATATTGCTTAGTTCGGAGAGTATTGTACCAAAATGTTAAATAGCTTGATTCCACACTTTGATCTTCACAGTGCCTTTCTTTGCCGGCATGGAATACATGAGTACGTTAATTTAAAAATTAGAATCTCTGTATATTTTTTGCCGTTCCTTTAATCATGGATTATGCATACTGTACAGAACTTTTGTGTTTTAGAGGATCTTCTGTTCCTCCTTTGTAATGGAGTTTTTGGGTTTCTCAAGGGAAGGATAAGTGTTCTGATAACTTAAGAAAATTAAAGTTGATAAATAAAGTAAGATGCAATAAAATCATGAT TCONS_00226139 . 5' 203 TCONS_00226139 . 5' 203 EMBV3_39041 GGCAAACATCAGAAACTGGTCCTATGGCTGGCCTCATGCCTTCTCAGTCTTCACAATGCC Gene GeneID:614415|ANXA13:NM_001105435:56_cdna Constitutive 0 NULL GeneID:614415 14 GENE ANXA13 MGC148475 annexin A13 EMBV3_33516 CTCTGTGTCTCTGAACATTATCTAACACATTGCCCAGCACAGAGTAGTTGTCCAAAAGAC Gene BVT0102_159456 - 1 EMBV3_12491 GK000007.2:34649602-35557617 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220178 1 XLOC_133495 NonCoding TCONS_00220178 XLOC_133495 NonCoding NonCoding - 7:35379029-35379909 - TSS164176 880 1 TCONS_00220178_2 70 0.760227272727273 1 0 6.95746295594563e-05 1.14186705416668e-05 0 0 0.000126234626645466 0 1.65673246255653e-05 0.000174753651570548 3.88529623488423e-05 4.2505134927696e-07 0 0 0 0 0 0 0 0 0.000146678225479869 0.000122581138325714 3.99014315048333e-05 1.68651696739075e-06 0 0 9.27296473199703e-05 0.000268207715017667 0.000153691301168553 0 0 6.21100211744768e-07 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 850 88.44 0.75 0 noncoding 0 0 0 0 -0.381776280379304 0.0842310007136355 0.00575540927154883 0.92110738475309 TTGCCTGTGAATTCATATTTATTCCGAGCTCCCCCAAACAATGTTTAATATTCCTTTTTCTATGGTTCAGTTCAGTTCAGTCGCTTGGTCGTGTCCGACTCTTTGTGACCCCATGAACCGCAGCATGCCAGGCCTCCCTGTCCGTCACCTACTGCCAGAGTTGACTCAAACTCGTGTCCATTGAGTCGGTAATGCCATCCAATTATCCCATCTTCTGTCATCCCCTTCTCCTCCTGCCCTCAAACTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAGCTCTTTGATTCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAACAACCAGGACTGATCTCCCCTAGGATGGACTGGTTGGATCTCCTTGTAGTCCAAGGGATTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGTGCCCAGCTTTCTTTATAGTCCAACTCTCACATCCCTACATGACCACGGGAAAAACCATAGCCTTGACTAGACAGACCTTTGTTGACAAAGTAATGTCTCTGCTTTTTAATATGCTGTCTAGGTCATAACTTTCCTTCTAAGGAGTAAGTGTATTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGTCCAGAAAAATAAAGTCAGCCACTGTTTTCATTGTTTCCCCATCTATTTGCCATGAAGTGATGGGGCTGGATGCCATGATTAAAGCACTTCTAAAATGATACTGTAATTTGTCTCTTTCCATGTCAATTACACACATTGCAAAGGCTGACTTTTTATTCATCTCTGTGTCTCTGAACATTATCTAACACATTGCCCAGCACAGAGTAGTTGTCCAAAAGACATTAGCTGTTACA TCONS_00216430 . 3' 194065 TCONS_00216430 . 3' 194944 EMBV3_31887 TGCTGGATCCGGACAGTGATGGTTACAAGTCATCGAGAGCCACGCCGTCGAAAAAGCTGG Gene GeneID:528767|LOC528767:XM_002698168:650_cdna Constitutive 0 NULL GeneID:528767 25 GENE LOC528767 NULL similar to Kinesin-like protein KIF19 EMBV3_26629 TTCTTGGCCCAGCAGGCCTTACATATCCCAGGAGGCTTTTCGTGCATTCACAGCTCTTTA Gene GeneID:613462|ARL2BP:NM_001076274:406_cdna Constitutive 1 NULL GeneID:613462 18 GENE ARL2BP MGC134540 ADP-ribosylation factor-like 2 binding protein EMBV3_18393 GACATGTCTAATTTTGATCGTTTCTCTGAGGATTCACAAGACAGTGATGATGAAAAAATG Variant GeneID:493638|PTGES3:NM_001007806:932_cdna 571^633 3 EMBV3_24036 GeneID:493638 5 GENE PTGES3 CPGES MGC127581 prostaglandin E synthase 3 (cytosolic) EMBV3_21316 CAGTGGTGGCAGTTCACAGGAGTATATTGAGAGGAAGAACAGCTGACATAGAATGTGGCC Gene GeneID:281231|HRH1:NM_174083:71_cdna UTR3_Alt 1 NULL GeneID:281231 22 GENE HRH1 NULL histamine receptor H1 EMBV3_42662 AACCCTGCCACCTCAAAGCCATAATAAGAGCGAACTGAACAGAGGGATGTAAGGAAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18882 GTTGTTTCCACAGGTCACCAACTACAGAAACAGTGGCGTGGTCTGAAAATATGGACACAC Gene GeneID:100295928|LOC100295928:XM_002693930:31_cdna Constitutive 0 NULL GeneID:100295928 16 GENE LOC100295928 NULL similar to regulator of G-protein signaling 2, 24kDa EMBV3_05102 AGTGGTCGTGCACTATGGTTTTGCCTCCATCATCTATCTGAAGCTCAAAGGCCCCCATTC Gene GeneID:617033|LOC617033:XM_002688597:337_cdna Constitutive 0 NULL GeneID:617033 7 GENE LOC617033 NULL similar to Olfactory receptor 10H3 EMBV3_19056 ACATAGCTTGCGAGCCTTCCCCTTCTGCAAACAATGAAATACACGTGGCCATTTCTGCTG Gene GeneID:783681|JAG1:XM_002692032:25_cdna UTR3_Alt 2 NULL GeneID:783681 13 GENE JAG1 NULL jagged 1 (Alagille syndrome) EMBV3_33454 TGATCTGGCTCTCAGCGTCACTTCAGTTTCTGAGGACCTCCTTTGGGCCTGGGAACTTGT Gene GeneID:508633|CD8B:NM_001105344:59_cdna Constitutive 1 NULL GeneID:508633 11 GENE CD8B NULL CD8b molecule EMBV3_34443 GGGGTACCAAGACCTGCTGAATCAAATGAAAGAAACTGAAAGCCAATCCGTCTGTGAAGA Gene GeneID:519522|LOC519522:NM_001046244:32_cdna Constitutive 1 NULL GeneID:519522 9 GENE LOC519522 MGC137434 chromosome 6 open reading frame 182 ortholog EMBV3_13929 CCTTGTTGAAAACAAGCCCCTCACCAGAGCGATCACTCTTCTTAAAATGTAAGACCCCAG Gene GeneID:522632|TRIM14:XM_002689733:94_cdna Constitutive 0 NULL GeneID:522632 8 GENE TRIM14 NULL tripartite motif-containing 14 EMBV3_05203 TTCGGAAGAGCCTCCTTATCGGCAGTCACATATACGGAAAGCTTCTGAGGACCACCATCA Gene GeneID:539250|KCNJ1:XM_002699221:19_cdna Constitutive 0 NULL GeneID:539250 29 GENE KCNJ1 NULL potassium inwardly-rectifying channel, subfamily J, member 1 EMBV3_04041 TCCTGGCGTCTGTTTTTATTGGCAACACGGTATCTTCAGTTTTTAGCTCTCACTTTGGCG Gene GeneID:507983|LOC507983:XM_002685349:219_cdna UTR3_Alt 2 NULL GeneID:507983 2 GENE LOC507983 NULL similar to KIAA1728 protein EMBV3_22240 AGGTGTCATCACCTGAAGAAGCGAACAAAGCCTGGCAGCCGAAGCCAGACAAAGTCACAG Gene BVT0101_073981 + 1 EMBV3_35414 GK000014.2:46354139-46644558 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056439 1 XLOC_034242 NonCoding TCONS_00056439 XLOC_034242 NonCoding NonCoding - 14:46380533-46380732 - TSS42116 199 1 0 0 0.000252473746011168 0.000139507586291952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000469791906155846 0 0 0 0 3.48163949947337e-05 3.54044449013901e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.0425136749126575 0.781117484729892 -0.0129978654664248 0.784743413245976 GGAGTTGAAATATCACACTTTACTGTCTCTGATTCTTTTCCTGAGTTGACCCTTCACAGCGATTAAATATGTCTTTTTCCTGAACAGCTGTGACTTTGTCTGGCTTCGGCTGCCAGGCTTTGTTCGCTTCTTCAGGTGATGACACCTGAATTCTGTGCCAAGGTGCACATGCCCTCGTAGACAATGTGCTTTCCACTAC TCONS_00053441 TCONS_00053443 . 5' 26318 TCONS_00053441 TCONS_00053443 . 5' 26318 EMBV3_07015 CAGAGATGTCAGGCGCAGAGACAGGAGAGGGTCTTAGGAACACAGATCCCATTACCAACA Gene GeneID:100295833|LOC100295833:XM_002694052:146_cdna Constitutive 0 NULL GeneID:100295833 16 GENE LOC100295833 NULL similar to urotensin 2 isoform b preproprotein EMBV3_24302 CAGAAATTCATGGAAGATATGATGCCAAAGGCAGGCGCTAACATGATTGTGTCTGGCAGT Variant GeneID:533764|RPE:NM_001098079:38_cdna 356^442 1 EMBV3_16713 GeneID:533764 2 GENE RPE NULL ribulose-5-phosphate-3-epimerase EMBV3_33234 ACCCCTGCATTACACGACCATCATGAGTGACAGAGTGTGCAACTTACTGGTCTTTGCGTC Gene GeneID:788298|LOC788298:XM_002687495:376_cdna Constitutive 0 NULL GeneID:788298 5 GENE LOC788298 NULL similar to olfactory receptor MOR109-1 EMBV3_18945 GTTGCTGCCAGTATGGACAGAGTGCCAAAGGTTACTCCTAGCAGTGCCATCAGCAGCATA Gene GeneID:539432|EPC2:XM_002685364:259_cdna UTR3_Alt 2 NULL GeneID:539432 2 GENE EPC2 NULL enhancer of polycomb homolog 2 (Drosophila) EMBV3_03090 TTCATCAATGCCTACCTGGTGGATGACAGCTTCAGCCAGGCGCTGGCCATCCGGAGCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43410 CCAAGTTTGCGAAGTTTGGAGAATCGGAGAAGTGCCCTCGATGCGGAAAGTCGGTCTATG Gene GeneID:540407|CSRP3:NM_001024689:42_cdna Constitutive 1 NULL GeneID:540407 29 GENE CSRP3 CRP3 cysteine and glycine-rich protein 3 (cardiac LIM protein) EMBV3_42529 TTCCTACCCAACCTTTCCTTCCCACCTTGTGGACTTGAACTTGGACCCATTGCAGTTGCG Gene GeneID:539774|PHF23:NM_001024570:156_cdna Constitutive 1 NULL GeneID:539774 19 GENE PHF23 MGC2941 PHD finger protein 23 EMBV3_41926 AAAGCCAACCTCATCCAGGCCCGCTTTGAAAAGGAGACTCAAGAGCTGCAGAAGAAGCAG Gene GeneID:504736|CCDC135:NM_001038031:114_cdna Constitutive 0 NULL GeneID:504736 18 GENE CCDC135 MGC134162 coiled-coil domain containing 135 EMBV3_24814 CTCTCTGCTTGACACTTGGAGTTTTGAGGTACCAAGAACTGTATGCTGACTTCACCTCCC Gene BVV0102_171921 + 0 NULL GK000023.2:3058879-3089664 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12067 AAAGCAATGAAGCGACCTCTCGAAGCATCTGTAGACCTGGCCTTCCCTCCTGGTGCTCTT Gene GeneID:527679|MBNL2:NM_001099710:52_cdna UTR3_Alt 3 NULL GeneID:527679 12 GENE MBNL2 NULL muscleblind-like 2 (Drosophila) EMBV3_15559 AAGGCCACCAGAGAATTCACAGTGGAGCAAAGACGTTTGAGTGCAGTGAGTGCGGGAGAT Gene GeneID:100296121|LOC100296121:XM_002695444:87_cdna Constitutive 0 NULL GeneID:100296121 18 GENE LOC100296121 NULL similar to zinc finger protein 551 EMBV3_34044 GCTGGGAACCAAGCCTAGAGAACCAGCATTACCCTTCAGCTGTTTTCCCCACACATGTTT Gene BVT0102_321459 - 1 EMBV3_31050 GK000003.2:15033380-15093503 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14438 GGCTGGCTTTCGGTGTACCATCTTACGAGTCTTTCCCAATTTATCCCCTTTGGGTCCCTA Gene BVV0102_073136 - 0 NULL GJ058430.1:1-167702 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31310 GGGAGATTCTGCTCCCCCTAAACCCTGCATCTCTCTCATCAAACAAGAGCATCTAAAGTG Gene GeneID:510205|SERPINB10:NM_001098925:11_cdna Constitutive 0 NULL GeneID:510205 24 GENE SERPINB10 MGC159890 serpin peptidase inhibitor, clade B (ovalbumin), member 10 EMBV3_00293 GTCCGAGCTCAACCTGGGGACTATGTGCTAGTGAAGATCACCTCAGCCAGTTCTCAGACA Gene GeneID:514086|CDK5RAP1:NM_001075646:1042_cdna Constitutive 1 NULL GeneID:514086 13 GENE CDK5RAP1 MGC142850 CDK5 regulatory subunit associated protein 1 EMBV3_20578 AAAGAAGGCAAAGAAACCAGCTAATACGCTCTCAAACACCTCAGTTCTGTCAGCAGGAGC Gene GeneID:100139725|ZDBF2:XM_002685516:50_cdna Constitutive 0 NULL GeneID:100139725 2 GENE ZDBF2 NULL zinc finger, DBF-type containing 2 EMBV3_22941 ACCATCCTGCCCAACAACTACGTCTGCTATGTCACGGGCTGGGGAAGACTGCAGAGCAAT Gene GeneID:282687|CELA2A:NM_174714:25_cdna Constitutive 0 NULL GeneID:282687 16 GENE CELA2A ELA2A Ela2 chymotrypsin-like elastase family, member 2A EMBV3_39875 GGCTGGGCCTTGCGGGCTGCCCGGTTGGAGACTCACGGGACATAACACCACTGCTGGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43067 AGAACTGTTTGATGGTTGTCAGTGAGCAATAACCTGATGGTATGATTCCTCGTAGCACCG Gene GeneID:514474|TP53BP2:XM_002693966:173_cdna Constitutive 0 NULL GeneID:514474 16 GENE TP53BP2 NULL tumor protein p53 binding protein, 2 EMBV3_25610 CCGCCTACCTAGAGACAAGAACCATTTGTACGTTCCCCGCTTGAGGACTGTGTTTAGCCA Gene BVT0102_171913 + 0 NULL GK000016.2:62915248-62930459 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073620 1 XLOC_045382 NonCoding TCONS_00073620 XLOC_045382 NonCoding NonCoding - 16:62918488-62919928 - TSS55464 1440 2 TCONS_00073620_3 82 1 0 0 0.000104671281118923 1.28527786451478e-05 1.73003481922217e-05 0 5.96175740649433e-05 0.000259187173755407 4.10744630937167e-06 0.000361631205351393 2.8572882201857e-06 1.58971152327179e-06 0 3.98512926790254e-06 7.51332397046329e-05 0 0 0 0 9.46163794727715e-05 9.98810020933794e-05 2.10814421730583e-06 0 0 0 0.000413784308206563 0.0001125317569134 0.000150547629363044 0 4.04550777898061e-05 0 0 noncoding 0 0 0 0 -0.633810578565553 0.124757192941207 -0.0665634586586299 0.328787789517025 CTGCAAGGCTATGGAAGAATCTGTATTTGCTGAAAAGGGGTCAGACCAGGGAGGAAATCCCAAATGCAAGGGCTAAACCGGCCATTGGGTAAACCACACTGTGGGGAAGCCTGGACCCCAGTCCTTCAGGAACTGGCAGTGCCCCCTGAAGCCAACTCCTTTCTGACCTTGTGCTTTTTCTTTTTTGCCTCATCTGACAGTTATAAAATGAAAATCAACTACCAGATTGATAACATTGTTCATGTACACTAATACCATGAAACACCAGGGAAAGAGGACAAAATTAAGACAGAAGAAAAGCATTTGGCAGTGTCGTTCAATAAGGTGTCTTTTTTTTTTTTAGGCCAATGTAAAATATAAACTCTGATAAAGATCCCTGGGGGCCGTTAGATCTTTGTAGTGAAGTTCTCTTTGCAAGAAGTATAAGAAATCTGACAAACAAAAGACGTTAGCGTCTCTGAAGCTCGAGCTGGTTATTCTGATACAACTGCCTCCTGGCCAGAGGGGTTGAAGGCTTCAGCTTAGCAACAGCTGTGTGCTGTGTGACAGGCCACCGTCCACCACCCGCACCCCCGCTCGCCCCCTCCCTCTGACCACTTGGTTATAACCATGGAAATAATGACCGTACCTCCTCAGCCAGCAGGGTCTGGAAGGACCGAGGAGGCTCATTTTTAAACATTGCACTTTAAAAATTGGAAACCGTGAGATGAAGAAAAATTCAATTAAGCGGAAATGAGTTTTGTTTTATTGCCTGCTGCTGAAGGGCGCTGGGCATGCTGAAAGCTAAATAAAAAGCACATCACTGCCTCTCTCTTTCTTGGATTGGTCGATGGGCCCTTTTTGCAGTCGTTGCTCCAACTGCTCTAACACGGTGACTGGAGCCAAAAAGAGAGAGTGCAGCAAAGTCACCCCATCCCCACTGCTTGGTAGGACCACACGGAAAGCACAGTTTCAGCTGCGAGCTCTGGTGAGGAGTCAGCTGCAGGTCTGGGAGGTGCGCCAAGCATCCCTTTGCTTCGGGAGGCAGAGCACAGGTGGACAGAGCCGGACCCCCCACGCTCACCCGCCGCCTACCTAGAGACAAGAACCATTTGTACGTTCCCCGCTTGAGGACTGTGTTTAGCCAAACACGCAGGTTCAGGGCTGCAGCATCTCAGACGCTGCTCTGAACTTGCATTCAGACCTCAAAGCCCCAGATCCCCTAAGCTCTGGATTGTCGCCCTCACCCTTCGCAGTGTAAATTTTGTATAGTTAAAAAGAAATGGAGTCTCATTTCCTGGGAAAAAAAGAAAAAGGAAAAAAAAAAAGGACCCACCCATCCTTATTTATGGCCATGTGACTGGAACACAGAAGCTGGTGCGTTTGTTTGTATGTGCCTCCTGTGTGTTGGCATGATGAGATGTGTATGGTAAAACTATGTCAAATAAATATGGAAATTCT TCONS_00067931 TCONS_00067932 TCONS_00067935 TCONS_00067937 . 3' 880 TCONS_00067931 TCONS_00067932 TCONS_00067935 TCONS_00067937 . 3' 2319 EMBV3_02009 TGAAGTTCAGAATGGGCTTGACCCTCTCCCCAGTCAGCCATTGCCTCTGTGCTGTTCCTC Gene GeneID:530929|LOC530929:XM_002686348:12_cdna Constitutive 0 NULL GeneID:530929 3 GENE LOC530929 NULL hypothetical LOC530929 EMBV3_34802 AGTGCAGTTCGCATCCTAGAAGTTGTTAAGGAACTTAGACCAACTTTGAATGAACTGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22616 CACGTGTTGGAGAGATTTATGTCTTTCTTGGATAGCGTGGGATGAACTGGTAAAAATACA Gene GeneID:540387|CYSLTR2:NM_001102240:178_cdna Constitutive 0 NULL GeneID:540387 12 GENE CYSLTR2 MGC179430 cysteinyl leukotriene receptor 2 EMBV3_13500 TGGGGAAGGACTGGCATCGGCCTTGTCTCAAGTGTGAGAAATGTGGGAAGACGCTGACCT Gene GeneID:574093|CRIP1:NM_001025349:289_cdna Constitutive 0 NULL GeneID:574093 21 GENE CRIP1 NULL cysteine-rich protein 1 (intestinal) EMBV3_35668 TGACCGTACAGAACCCGGACACGGCGCTAGGTTGAACAGTGTTTAAAACGTTTGAAAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24149 AGGTTACCGGTGCTCAACACTCCCTCCTTTAACATCCTCTTCGCTTCAACCCTGTGAGGT Gene BVV0102_419678 + 0 NULL GK000020.2:3968829-4009736 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38456 CCACCACCTTCAAGGGCGTTGACCCTAACAGCAGGGAAGACGCTGAGTCATCTGGACCCC Variant GeneID:613381|HN1:NM_001034734:23_cdna 155^331 2 EMBV3_35384 GeneID:613381 19 GENE HN1 MGC127173 hematological and neurological expressed 1 EMBV3_02266 GCCACCTGGCCGGGGTGAACAAAACTCCCTAAATCTGAATCATCTGCATGGAAATCAGCA Gene GeneID:615392|TIGAR:NM_001076370:43_cdna Constitutive 0 NULL GeneID:615392 5 GENE TIGAR C5H12ORF5 MGC139129 chromosome 12 open reading frame 5 ortholog EMBV3_09077 CTTAAAATGCGTCCTGGCCTTGGGGTTCAAGAGGAACACTACTGCCTTTGGGGAGGAACT Gene GeneID:511723|RPP38:NM_001038085:91_cdna Constitutive 0 NULL GeneID:511723 13 GENE RPP38 MGC134596 ribonuclease P/MRP 38kDa subunit EMBV3_35269 ATGCTTCCAGCTAGAGCTTCGAGGGGATGTGGAGATGAAGGGAAAAGGAAAGATGCGAAC Gene GeneID:100337159|LOC100337159:XM_002689700:158_cdna Constitutive 0 NULL GeneID:100337159 8 GENE LOC100337159 NULL atrial natriuretic peptide receptor B-like EMBV3_12206 TCATGGCTGCAAACGAGCCAGCGTTTTTGCCTTATTGGGTAGCATACTGGACCCCTGGTA Gene BVT0102_143210 + 0 NULL GK000004.2:103863185-103973691 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185115 TCONS_00185120 TCONS_00185116 TCONS_00185119 TCONS_00185121 TCONS_00185118 TCONS_00185117 TCONS_00185114 TCONS_00185122 1 XLOC_111500 Coding TCONS_00185115 XLOC_111500 Coding Coding - 4:103878063-103917217 - TSS137689 11545 1 TCONS_00185115_1 433 0.0164573408401906 6 0.705284397108778 0.000458003172472113 5.12895672338458e-54 2.78411282592861e-07 0.00016511218557942 3.67873910028042e-05 9.11857571757672e-113 0.000250322462168104 4.87656651435366e-06 0.000283920425030552 9.27965636743781e-05 1.42029172230582e-35 2.69383682569217e-06 0 3.64032151258198e-44 0.000122290573232489 2.86776363237834e-23 4.52194396278279e-24 8.52538453461262e-21 1.99502740029213e-154 0.000145716383059541 3.25566111140117e-23 2.58012846373388e-43 1.18953494359865e-36 0.000382729325682375 0.00045468587413494 0.000559930612762972 5.04391132226509e-05 5.95187224395494e-05 0 2.76393689382338e-06 XM_005204016.1 HIPK1 PREDICTED: Bos taurus homeodomain interacting protein kinase 1 (HIPK1), transcript variant X1, mRNA. 1e-18 102 66.17 0.0338674750974448 NM_022740.4 HIPK2 Homo sapiens homeodomain interacting protein kinase 2 (HIPK2), 0.0 2675 82.04 0.229536595928974 TCONS_00185115_1 sp|Q9H2X6|HIPK2_HUMAN HIPK2_HUMAN Homeodomain-interacting protein kinase 2; 0.0 766 95.39 0.997690531177829 0 coding 0 0 1 1 0.044575769154781 0.666455922175084 0.000904999563197728 0.985601655161857 CCCCACATCCACCGCCTCTCATTGGAAGCACTTTCAAGCCAGGAACACGCATGCTCATGGCAGCCATTACAATCCCATCATGCAGCAGCCTGCGTTGTTGACTGGTCATGTGACCCTTCCAGCAGCTCAACCCTTAAATGTGGGCGTGGCCCACGTGATGCGGCAGCAACCTACCAGCACCACCTCTTCCCGGAAGAATAAGCAACACCAGTCCTCTGCGAGAAACGTCTCCACCTGTGAGGTGTCCTCCTCTCAGGCCGTCAGCTCCCCGCAGCGGTCCAAGCGCGTCAAGGAGAACACGCCTCCGCGCTGCGCCCTGGTGCACAGCAGCCCCGCCTGCAGCTCGTCCGTCACGTGCGGCTGGGGTGACGGGGCCTCCAGCACCACCAGGGAGCGGCAGCGGCAGACGATTGTCATCCCCGACACCCCCAGCCCCACGGTCAGCGTCATCACCATCAGCAGTGACACGGACGAGGAGGAGGAGCAGAAGCACGCCCCCACCAGCACTGTCTCCAAGCAGAGAAAAAACGTCATCAGCTGTGTCACGGTCCACGACTCTCCCTACTCCGACTCCTCCAGCAACACCAGCCCCTACTCCGTGCAGCACCGCGCCGGGCACACCACCACCACCTTCGACACCAAGGGGAGCCTGGAGCCACACTGCACGGGGAACCCCCGGACCATCATCGTGCCCCCCCTGAAAACCCAGGCCAGCGAGGTGCTGGTGGAGTGTGACAGCTTGGGGCCAGTCAACACCAGTCACCACTCGTCCTCCTTCAAGTCCAAGTCCTCCAGCAACGTGACCTCCACCAGCGGTCACTCTTCAGGGAGCTCGTCTGGAGCAATTGCCTACCGGCAACAGCGGCCAGGACCACACTTCCAGCAGCAACAGCCTCTCAATCTCAGCCAGGCTCAACAGCACATTGCCGCAGACCGCGCCGGGAGCCACCGACGTCAGCAGGCCTACATCACTCCCACGATGGCCCAGGCTCCATACTCCTTTCCGCACAACAGCCCCAGCCACGGCACTGTGCACCCCCACCTGGCCGCCGCCGCCGCCGCCGCCCACCTCCCTGCCCAGCCCCACCTCTACACCTACACAGCACCCGCGGCCCTGGGCTCCACGGGCACCGTGGCCCATCTGGTGGCCTCCCAAGGCTCGGCGCGTCACACCGTGCAGCACACTGCCTACCCGGCCAGCATCGTCCACCAGGTCCCCGTGAGCATGGGCCCCCGGGTCCTGCCCTCACCCACCATACACCCGAGTCAGTATCCAGCCCAGTTTGCCCACCAGACCTACATCAGCGCCTCTCCAGCCTCCACAGTCTACACTGGATACCCACTGAGCCCAGCCAAGGTCAACCAGTACCCTTACATATAAACACTGGAAGGGGAGGGGATGGGAGGGAGGCTGGCCAGAGGGAGAGGAGGAGGGACGGAGGGGGGATCTGGGGCTTCTGTACTGAAGATGCCGCACAGAAACAATGCAAACGGGCAGGGGTGGGGGGCAGGGGGCAGGGACGGGACACAGATGAAACTTGAACTAGGAAGTAGGAGGACTGAGAGCGGAGGAGAGAACATTTTGAAAAGGAAGGGATTTAAGGAGGGGGGAAAATTATGCTTTTTATTTTAAAAAAGAAAAAGGAAAAAAAATTAAAAATAAAACGTCAGTAACAAAAAAAAACCACAGCTCACGAACCCGTTCGGCACCAAACTGGAAAGAAGAAGAAGAGCCACGGAAGATTCCAGAAGTAGGGGGAGGGGGGCCTCCGTTTTTGAAGAACTTTATGAACTTTGCAAAGATTATTTTCATATGGCAGCAAGTGGAGTTTAAGAATTTGCTGTCAGGGACACCTGATACGGAAATCCAATAGATTTTTAATGATTGAACGTAAGGATTAGGGATTTTTCCAGAACTCTATAAAGGGTCGGGAGCCCTCTGGAAAGGCCAGGCTGTGGCCTGAGGAGTCTGGTGTCTAGGGGTTGGGTCGGGGTTGGCGGAGCCTAGTTCTGGTCCACTTGCCTGGACCTTTGGGGAGGGCGGGCAGGCAGCTGGGCTGAAGGAGGACCCCGGGAGAGGGTGTGTTTTTCTGAGCACTCTGGATAAATCCCTAAGCAATGATATTCCTCAAAATGTCATTAATGATGTGTGTTGCAAACTCGCTTTTTTTTTTTTTTTTGGTCTTTTCTGAAAACGTCTCTTCTCTCTGAGTGCATCCCGCGTCTCATAGCCTAGGGCTCGCGGCGTGGCCAGCACCCTGGTAAATGTAGCAGTGTGCACCTATCTGTGCTGCTTTTCGTTCACCCCATTGATACCAATAGACTATCCTCACTGTAATTGCACAAGAAAGGCGATCTCACGCAGGCACGTCCCCCGCGCGGTGGTCCAGGTGCGCCCTCCCGCCCCCGGCACCGCCTCCGGCTCTCGCAGACTTGGTTTTTACATCCTTTCCTCCTAGTGCCTTAGCGACCGGGGACGCGGTTGAGGGTTTACTTCCACGGTACTCCAAGAAGCCGGCTGAGGCGAGTCTCAGCCTTTCAGCCCTTCTTCTGTGCTGTTGCAACATTTTACTCTGGTCTTTTCCTTTTTTTTTTTTTTTTTAATTTTAATTTTATTTTAATAAGCTGTTGTCTTTCCCCGGGCTGTTTGCTAGCAGAGGAGTGTCAGGGAACTGGCAGGGGCTAGGAGAGCCAGTGGGTCAGTAGACGGCTGCGGGAGGTGGATGGTGGTGGGTGAGGCTGACGCTGGAGATGGCTTGGCGTGGCTCTTCCCCTGGTGGACAAAGCAAGAGAGACTGACTCCCCACCCTGCACCTTCACCCAGTTCTGCCCCCAGCGGGCTAGCTCTGCGATCTGTGGGATCACAGATCCCATCTCAGTTTCAGGAATGTTGGCTTTGCTTCTGACGCAAGGAGCAAAGGAGAGGAGCGGCCTGCAGCCTCCAGGCCCGGCACTGGCTTCGGGTCGGTCGCCACCTGTCCGCAGGGCGGAGAGCAGGCCTGGGGGCCCGCCCCGTGTTCTCAGACCCGCCCCACACTCCACTCCGCCAGCCCAGCCCATCTGGCCTCTGCTTCCACCCTCCCACCCCACCAGGCTGTGTTTTTCTCTCAACCATTTTGCCTGATCCCTTTCTCTGTAGACAACCGCCAACCGTCATTTGCTGCTAAATCTTTCCTCGCGTTACCCAGGCCTACCCCAGGCAGGCCTTCGTTTCTGGTCTTTGAGGTTTCGGGTGGGCAGAAGGCTGGAGGGACATTCACGAGGGTGAGCCGGTGATCTTGGACCGCCCTTGGGAAAACACGCCCACGGGCAGTCAAATTTCCAAGGAAGTTTGCCGTTTGCCCTCTGTGCATCGTTGATAACGTTCTGGAAATTTCCTCAGGCTTTGAACACTGGTGGGGGTGGGGGTGGAGAGGTGTCTCTATCCATAGCAAATTATTGTTACACACGAAAACGTTGGGAGGTGCTGTCTGGTCCCAGACGGGATTTTTAACTGTGGTCCTCACTGTTTGATGGTTGATGCGGAGCCCCTGACCCCAAAGCCAAGCTTCCAAGGTGCAGAGAGATCGCTCCCGGGTACGAACAGCAGTCCGCACCCGCCTCCCTCACTTTCCTTCCCCATCCTGCGGTATCCCTTAACGATCTACTGTGAAAGGTGTTTTTAATCTTGATATCCGACCTAATTCAGTAACGAAGCCCAGCCCTTACCTTAGCTCTTAGCTGTGAAATGTGAAATAACTCTGGAAAATATCCCCTCTCCATGCATCAATTCTACTTAAACGACAAAGAAATCGGTCCCCAGGTTGGAACCAGCTTAGTCCCGGCCTCAGCCTGGAAGGAAGGAAGGACCCCATGTCCGCCGGGGAGCCGCCTACAGCAGGACACAATGGTGTCTTCATGGCGCCACAGTCAATGCATCTTCTATCTGGACGTGGGGAAGTGCCGCCATTCTGAGACAACCAGAAAGTGGTCCATGGGGGTGGGGGCGGGGAATGTGCCAGAGGACTCGTGAGCCCGAGCACTCACGGAGCCACGCCAGCCTGCGGACGGATCTCTGTTCTGGACTCGCGGCATCCAGAGGGCAGCAGTGCCCCGTCCGACCCTCCCCGTGCCCAGTCGCACAAGTCATGGCTGCAAACGAGCCAGCGTTTTTGCCTTATTGGGTAGCATACTGGACCCCTGGTACTGTTCACTTCCAGCGCTTTCTAGATCTGATCTTTTAACAGGAAAAGACAACGTAGCCTTCCACTTTAATGAAAATTATTTTGTCTACTTAAGTTGGAAGTTACTCTTTCACCTGACATTTTCTTTCCTTTCCTTCCTGATCAGGAAATGAAAGTTTCATGCTGCTCATAAAGATAATATTATTGTACTAATTATTTTGGTTATTAACCTTTGTAATTATTATCCTAATCATCATTTTGATATTTTAGTTGGGGGTTTAAAGTGCACATTTATTCCAAGTTATCTTTGTGTTTTCTCTTTAATATTTAAATTTATTTTATTGTATCTGTGAGTATCTGAGTAGACAGGAGGGACATCCAGATGTCCAGTTTTGTCAGACCAAAAAGAAAAGAAAAGAAGGAAGGATTCAGGAATCAGGAAAAAGCTGTCAAGAATGATCCACCAGAGAACAAAAGTCTGAAGAAGAATCAAAGCCTTTATCTCTGTGTAAGCCAACTTGGGCTCTGGACAGCATGGTTCGTGGTCACCATCAAGACTAGATTTTTCTAGACTCTCAGTGGCCTGGGAAGAGATCTGAGGAGGCTCCTTGGAGGCTGAACCCTCAGCATGGTCCTCTCCAACCTTCCCTGTGCTTCTGAAATCTGCTAAATAGACCCTGGGCCTGCCTCGCATCTGATACTGACCTGTCAAGGAAAAAAAAAAAAAAAAGCCCTCTGCCCAGAGCTGACCCAGCCCCCTCCCTAAAAGTCCCCCCTTTTCCCATCAGCCCACCAGAAGTGTGGCTTATACCCTTCAGTGTATAGATAATGTTGCCTCCTAGAAGCCACTGAAGGTAACGAGCTGATGGAAGGTGCTTAGGCAGGTGGTACCTTCCCCTGGGAGATGTCAGCCTCCCTGCCCCTCACAAACCACACTGCCCACTTCTTCAGTCCCTGCCCCCACCCAGTACATCTCTGCACACAATTCTAGGGACAAACTGTGGAGCAAAAAAAATAATAAATAGGGATAGTAGGAGGCCAGAAGAGCACTGACCGTGTCCGGCAGGTCCTCGGACAGTGTGGGCTGCTGCCCCCATGAACTCGTTGGCCAGTGGAGGGGCACAGTGGGGCCTTACAGCGATGCCTACTGGGCTCTGACTGTGCCCTTTAGGCCACCATGCTGGGTGCCATGGGCTTTCTAAATCAGCTTGAGGTGCCCACACACCGCCCACCAAACCCAGAAACTGCCAGGCCCCAGGTGGGTGAAATAAGGCCTGGAATGACAGGCTTCACTGAGGCTAATGAAGGGAGACGCCAGGCCATGCCCAGCCCCCCACCACTCAGCGAACATTAGTATCCTCCCCGCATCCCCACCTGCCTTTTTCTTCCAACCCAAGCACAGAGCTGTGGGTCTGAAGCCCTCGGAGAAGGCCCTAGTGGGAGAGATGAGCCCCTCTGTGGGTTCCTCAGCAGCTGCTTGAACTCCCACCCCATCCTCCAACCCTGAGTCGCCCTGGCAGATAGGCTGAATAAAGGCTGCCCATCCCCAGGACCCAGCTCCCAAGTGGAGAGATGCCAACCTAGTCTTCATGTAGACCACAAATACCCTAGAACATCATCTGCTCTGGAATTGGCTCCATCCTCCTTTACTGAAGCAACATGGTTACGGCTCAGAGGGGCAGGCTAAAAAAGACAGGTCAAGGGGAGCCTCGTAACCAGAGCCCTGGGAACCGCAGGTTGATTTGCTTCTGCTCGTGTCGTCTCGCGGGCACCTCGGGTATTTGCACCGCCATCTCTGTGCTTAGTGCCTCCTTTCATGATGTTTTGGCTGTTTCCAAGGGAAGGGTGAGCAGGCCGATGGGTGGGAGGGTCTGAGGCTTGGTGCCAATTAATACTGTGACGTGGAGCATGTGGTTGGTCGAATTCAGAGGGAAAGGAAGGGTTGGTTGTCTCCTGGACTGTCTTTGCATTCTGGCCTTACTGGTGGTGAGTGGCTGGTGGGCTGTGGGAGCTGGAAGACTTTACCCGCCCAGACACCAGATTGTGGGATGTAAGGAAGGCAAGGAAAGATCAGCCCAGCTGCTGACAGGCAGATTTCCCTCGACCGGATCTCTGGAATTGCAAACACTCATTTTTGAACAAGCTCGTGGTGGAGGATTTGGGTTGTGTGAGTGTGTGTGAGTGAGTGGAGCAGACTTTCTTGGAAACTGGAGGAAGGAGATGAGGAGGCTTAAGGAAATATTGCTGATGGGCTGTGGTTGATGAAACATGGTGGGCTGACTGGCCGGCCCCAGCTCTCGTCCTGGGTTCTCTGGTGCTGGGGGTGGGGTGGGATGTGGGGCTCTCCATGGCCTGTTCAGTAGCTGCGGGGACAGAACAGAAGAGAAAAACGAGGTGCCCTCGAGCAGCAGAGAGGCCAGGGCTCCTTCTGTGGGTCGAAGACCTTGCCCAGCACTGCTCAACACCAGCCCAAGCGATTCTGCCATGAAATATTCCAGCCCCAGGGACCCAACTTGCTTCTCGCCCCTTCTCTGTGTTTTCTTTCTGGTGTGTCTTAGAGATTTCAGATGGGGAAGGCTCAGAGTTGAGCAAGCTAGAGCTGTCCTAACCAAATTGGAAAGGAAAGTGAAAGTGTTCCTTTCTTTAGCCAAAGACCCTCTCCTCAAAGACACCCCCAGATGTGGACAGAATGGCATTCCTCTGTCCTTCCTCTCCCGGCAATAATGACTCTGTCAGTGATGCAATCCCGTTTATATCCTTCTCTTGCCTGACTTGTTTTGGGTTTTTTGTTTTTGACTTTATTTTAAAACTGTGCTCATCTTGTAAGTGGAGTGGAGGTTTATAACCCCCAAATGCTGCTGCTGTCAGGAAACTGGAAGTACTGCATGGATCTGTGGGTGGAACTCACCTTGAGTTACCTCGGGTATCTGCCGGAGCAGACCAGCCAGGAGGTGCGGCTCTGTCTGGGTCAGGTGCACGCCAGGACCGGGCTCAGGGGGGTCAGTATTTTTCCACTTCGATGCCTTAGGACTCTCACTTCTGAGTTCCACAGACGGGACTCAGTGGAGAGATGGAGATGGCAAACTGATATTTAAAGGCAGTAGAAACCCCTTGAAGGCTTTTGGCACCCTCACTCACTTGAGCAACCCAACCTAGGAGAAGTTTTTCCCATCCTTCTGGCAGCTCCCAAAAGTCCAAGAGAGCCAGCTCTGAGCCAGTTCTTCATTTGAGACTCAGTGAGAATCTGCAGAGAAGTGACCCTTCTGCGGGGCATGCTTGCTCAGGGTACCTCTGCCAGAAGGGAGCTTCCTGACGCCCCAGCTGAGTCCCAGAGCCTCTGCGAGCCCCTAATTGCACTCTCATTGCATTAGAATTTCACGTTGACTGTCTCTTTGTAAAACTTGCCATGTCCTTCGAGTAGGAGCCAACATTTGTTGAATGCTTTCAATACACCAGGCTCATCCCAAGCCCTTAGTGAGCACGGCCTCCCGGTACCCTCAGACCCACCCCTATTCACAACACCCCTCTCCTCCATTTACAGAGGAGGAAGTTGATGAGACAGTCGACTCTCTGAGAAAGTAGGCTGTGTTAAGGAAAGGAAATACAAGGATTGGGGGTGGCCCCAAATCCCCGAGCTTCTAGTGAAATTTTGTGTTCTTGAGACCTTTACTAACAGAATTTGTTTCCCTTGTTAAATAATCATCAGTGAGTGGCCTCGTGTTTCTGGTGATCCGTCTATGATGCTCCCATTGACTGTGTGCCAGACACTGTGCTGGAAGTCGCTCCTGTTTATCCCGTTTCATTTCGTCTTCATAACAGCCCTATGAAATCGGCAGTACTAGTCCCTTTACAGATGAGGCAGATGGCTTGGTGAACTGGTAACCAGCCCAGGGTCACACAAGCCAGTAGGGAAGGCCGGCCGTGACCTGGGTCTGCCCAGCTCACAGACGCTGGCCTCAGCTGTCTCCTGGGAGTGTGTGCGAAGAAGGGCCTCACAGGAGCGTTGCCCCGCACCACCCCTGCCCTGTGCGCAGAGCTCAGCAGAAGGTCTGTATGTAGAGGGAGTCCTGAATCTGATCCAGGCAGCAAGGGCAGAATTAGTTTGACTTTTAGAGAAAATCTTAGGGGAGTTTCTTTTGATTAATCATAGTAGGGTTCATTTTCGATTCCTTTTCAGTGCACCAACTAGCTTTAGCAGTGCTGCTGCTGCGACAAACTCTTATAAGAGTGAAGAAAAAAAAAAGTGTTCTTTTCTTCTTTTAAAAAAATATTTTTTTCTTGCTTATAGTTAATTCTAGAAAGGCAATACTAAAAGTATATATTTTCTTCAAAATACTATTTTTTACTGCACTGATAAATATCATAACGACTCTGGTCTCTGTAATCAATCCACCCTTCAGCTCTGGGTAGAACCAAAGGCAGGATTCACACCAAATTTGTAAATAATCACGTGTGAGTCTGGTGTCCAGGAACTGTTTTTTCTTTGTGTTTAAAAAATTAAAAAAAAAAAAAAAGGAAAAAAGAGACAAGATCAAGATGATATTTAGAAAGAGGAACAAAATTAAGTTTTCTTTCAAGATAGCCTTCTCAAAGAAATGGGAAGCAACATGTTGTGCAAACTGAAGAAAAATTAGCCAACTTTCAGGATACAAGGAAGGGGAGCCTCTGGCTGAGGTGGGAGATTAACAGTAACGTAGAAACGTGTTTCCTTTGGTTGAAAGGTGGCAAGAATTTAGCAATGCTTTAGAACTAGATTTTTCATTTTGTGGAAAACCATTACCATTTGTTACGAAATATCTCTGCAGTTGTTTGGAATGGGGTTTTCAGTTTCTTTTTTTTTTCCTTTAAAAATTTCCTTATTGACTGGCTCCAGACATGTTTGCCTCAATTCTTAGGTAGTTAACACAAGTTCTAGAGTCTTCTAGAGCTTTAATTCCATTGGAAGCAAACCCAGCGAATCAGAATTTGAGATCCTGGTTGGTTTGAATAGGTATTCTGGAATTCTTGACAGAACACCTGAAGACTTCTTTTTTTTTTTTTTTTAAGAAGGTTTTAGATACGTTATCTTACACAAACTGTGACCTGATGGCAATAATTACCTCAAATGTGGGCATTCATCCTGGTTTTAGCCTTTTTTGAAATCATGTAGCCAGCTTGCTCTTGGAATTTAAAAGACTATAAATATAAACTCTGTGTGGGCTGAAAACAATGATTACTGCACATCCTGGTCGTTGTTGCTTAAGTGAACTCTGAAAATAGGTAATCTTTACAACAGAAATTAAACCAAGGGAGAGAATATTCTTTGTGTTTTCAAATGTGAGTTTCAAATGCACATGTTTAAGTATATATGTTTTTAGCTACTGTAAAATGCTGTTAGCCTTCTAAGATATCAAGAGAGTCACGTTTTAAGTGCATAAACTATAAACAATTGACTGTGGATAACTAAACATATTTCTGGCCACGTTTTATAGTTAAAGTATTTTATAGTTTACATTTAAACTGGTACTTTTTAAAGAAAATTTCTGTTTATAACTGACATCTTCGGACCCCAGCAATTGCCTCTTCAGTTGGAGGCCACATTCCCCCAAGGCAGGTGTGTTCTGCCCCTACTGTAGCGCACCGTGAGCATTTCCATCCGTATTGCTGGTTTCCATGGGAACTCGAGAGAATGTAAAGGGATTTCCAGGCTGAGCAGGAAGGGGTGAGTCCACAGCCTGGGCCAGGTGCAAAGATGTGCCACGTGATATGCACACTGGTGGTCAAGGCCTTCCTTTTGACATCTTGGAAGAGGCAGAGAGAATAGACATCTGGTTCATTGATTTTGTCTTGATTTGAATGTTTAATTTATTAATCGACCCACTGACTTGCAGGCACCAGGCAGTAGAAGACACTGGGATTCAGGTGGCCCCAAGGGTACAGCTGCTATTTCTGGGGCCCCAGCAATACTCTGATTGGTGTTTTGCAGGGGAGAGTCATACACCCCCGTGCCTATATTTACTGGTTGAGTTTTCCATATATCTGCTGTCATTTAATTCCTTTTGTCCTTTAAAACAAAGTGTAAAAGGATATGTTTACTTTTTACTCTTTATCAAACTTCTGTTTGAAGCCTAGGTCATTAGGAGGTGGGATCTAGATTTTTTTTTTTTTTTTAACAGCTCAGTGTTTTATTCAGTAAACAGAGGGTAAGTAGTACATCCTCCAGGCGTGGGGGTGGGCCGACCCCAAAGGAGAGGCCTAGACTCTTTTTTTCTAGAGATTGTAAGTGCTGCTGAGCAGGAGGAAGGGACTGGAGACTGAAGGGCAGCTAGGGGGGCAGATGATGAGATCTATCCAAGTAGAGGTCACAATTGAGAGGCCCCGTCGCCATGCAGAAGCAGCCTGGAGGGCACCAGTTGCCCTAAATGTTTTGGTTCATTTCTTCTTTTGTGCCACAACCTTAGCGCAGAGGACCTACTGTGATCCAAAGGGCATTCCTTTAGCAAATAACACCTTAAAAGCTGCAGAACACCTGGGACCAGGGAACTGGTGGTGGTTCTTAATGCACTTGCTTTTTCCTTGTGAACTCTGTTGATAGCACGTTCTTATCACAGTATTCGGTTGGAAATGTCACTGTAAAATAGTTTTTGTCTTGCCTCTCCTAATTCAACTATCACTTTCCTCTGGTTTTCTCCCGTGATTTAAATAACCAAATATATTTTATGTCATTGTCTTTGGGGCTTAATCATATTTTTAAAAAAAACAGAGGAATAGAAATTAGCTTTTTTTTTTTTTTTTAGTAAATATGCTGTATCTGAAAAAAGGGCTCTGCCTTCTCTCTCATTTCCTTTCAGCCAGCCTCCACGCAAACCTCCCAGCACCCTTGCCCTCTTGTGTTGGGGCACTGCTCCCCCCACCGCCCCCACACGTGGCCACCTTGGCTTCCGCCCTGATGTCCCCACAGCCCCATCCATGCCCAGGCACCCAGGACGCCCAGGAAGCTCTCAAGAGCCAGGAAGAAGGATCCACTTAGCCTTGCCAATGGTGGTCTTGCCTCCCTGTTAGATATTCGCCTGCTTGGTTGAAGGGGCAATGGATTTATTTTTATTATTATTATTTTAATAGTTTGGCTCAGGTTATAAGGAAGAACTTGGGAAATGGAAAGTGACTTGACCATGCCCATCCTTCGTAGCTTTCTGTGACTTCTGAATGGAACCTAAAGCGTGCCCCACCCCAGTTCCCTCTCCTCCCTTCCGGCAGACTCCTGTAGACGCCTCCATGGCTCGTGGTTTCTCCCTGCCGTCTCATCGTCACTTTCTACCCTTTCACCGTTGCGTTACTGCTCCTTTAAAGCTTTCTCCCATGGCTTTTCCAGGGCACAATCATTTCTGGCCCCCAAAGCACCT TCONS_00185122 TCONS_00185123 TCONS_00185123 TCONS_00185123 TCONS_00185123 s 5' 0 TCONS_00185122 TCONS_00185123 TCONS_00185123 TCONS_00185123 TCONS_00185123 s 5' 0 EMBV3_24093 GACCAGAGGTATAGTAAGTAAAATGCACACTGTCTTTCATTATTCACATAGTTGTCTCTC Gene BVV0102_265702 + 0 NULL GK000012.2:55593474-55683997 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05618 CACTGAAGACATCACGCTCATCATCGCTGTGGACTGGTTCCTTGACCGACTTCGCACAAT Gene GeneID:538673|SLC1A6:NM_001099090:104_cdna Constitutive 0 NULL GeneID:538673 7 GENE SLC1A6 MGC166035 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 EMBV3_24761 TTACCTAGGGCTGCTCAGAGGTTGGGAACGAGAGGAACAGAAAGGCTACAGAGACTAGTA Gene BVV0101_011068 - 0 NULL GK000029.2:45323302-45338334 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165514 TCONS_00165512 TCONS_00165509 TCONS_00165513 TCONS_00165508 TCONS_00165510 TCONS_00165511 1 XLOC_100544 Coding TCONS_00165508 XLOC_100544 Coding Coding RBM4B 29:45337848-45347252 j TSS123615 1764 1 TCONS_00165508_3 369 4 0.81282569392747 0.00747679532155735 0.00383152723853325 0.00429577745019852 0.00459845795533757 0.00548771323433768 0.00147105831013106 0.00411407582937676 0.00362960493299562 0.00616554889380767 0.00445500193745014 0.000592805166497304 0.00199534315617633 0.000140421169111112 0.000228788820828275 0.00202476015840754 0.00722296012740818 0.000983425581493512 0.000170233852495755 0.006076625749143 0.00429996815497542 0.00388672930246808 0.00167586827327885 0.00228278746204867 0.00332371865520629 0.00812160805416185 0.00429276451511404 0.00448444171446561 0.00169275939015207 0.000649110728895126 0.00208960904235132 XM_005227011.1 RBM4B PREDICTED: Bos taurus RNA binding motif protein 4B (RBM4B), 0.0 3117 100.00 0.979024943310658 NM_031492.2 RBM4B Homo sapiens RNA binding motif protein 4B (RBM4B), mRNA. 0.0 2340 89.91 0.969954648526077 TCONS_00165508_3 sp|Q9BQ04|RBM4B_HUMAN RBM4B_HUMAN RNA-binding protein 4B; 0.0 736 98.05 0.970189701897019 4 coding 0 0 0 0 -0.512442168537962 0.0765171530561473 -0.0173504895708797 0.844529489673135 GGGCCTTTTTATTCTTAAAAGTATTTTGAACGGTGATGCTTCACGGAAGAGAGGCTCTTGTCAGGATGGTGAAGCTGTTCATCGGAAACCTGCCCCGGGAGGCCACAGAGCAGGAGATCCGCTCACTCTTCGAGCAGTATGGGAAGGTGCTGGAATGTGACATCATTAAGAACTACGGCTTTGTGCACATAGAGGACAAGACGGCGGCCGAGGATGCCATCCGCAACCTGCACCACTACAAGCTGCACGGGGTGAACATCAACGTGGAAGCCAGCAAGAATAAGAGCAAAGCTTCAACCAAGTTGCATGTAGGCAACATCAGTCCTACTTGTACCAACCAAGAGCTCCGGGCCAAGTTTGAGGAGTACGGTCCAGTCATCGAATGTGACATCGTGAAAGATTATGCCTTTGTACACATGGAGCGGGCTGAGGATGCAGTGGAGGCCATCAGGGGCCTTGACAACACAGAGTTTCAAGGCAAACGAATGCACGTGCAGTTGTCCACCAGCCGGCTTCGCACTGCCCCTGGGATGGGAGACCAGAGTGGCTGCTATCGGTGTGGGAAAGAGGGGCACTGGTCCAAAGAGTGTCCAGTAGATCGTTCGGGCCGTGTGGCGGACTTTACTGAGCAGTATAATGAACAGTATGGAGCGGTGCGCACACCTTACACCATGGGCTACGGGGAATCCGTGTATTACAACGACGCATACGGAGCACTTGACTACTATAAGCGTTACCGAGTCCGCTCTTACGAGGCAGTGGCAGCAGCAGCAGCAGCTTCCGCGTACAACTATGCAGAGCAGACCATGTCTCATCTGCCTCAAGTCCAGAACACAGCTGTGACCAGTCACCTCAACTCCACTTCCGTTGATCCCTACGACAGACACCTGTTGCCAAATTCAGGCGCTGCTGCCACCTCGGCTGCTATGGCTGCTGCCGCTGCCACCACTTCCTCCTATTACGGAAGGGACAGGAGCCCCCTGCGTCGTGGTGCAGCTGTACTCCCCACGGTCGGAGAGGGCTACGGTTATGGGCCAGAGAGTGAGCTGTCTCAGGCTTCAGCAGCTGCACGGAATTCTCTCTATGACATGGCCCGGTATGAACGGGAGCAGTATGTGGACCGAGCACGGTACTCAGCCTTTTAAAAACTGGAGGTAGGATAATTGCGGACTGAACCCTCGGGCTGCGGTCATATATGAGAACTTGCTCCGCGCGGTCCCCTTTGCCGGGATGTTTCCATTGCTTCATGTTTCAGTAAACAAAGGAGTTTGTGACCAACTATGTTTTCTTTCTTAATTTAATTCTTCTACATTCACTTTTCTCTCCTCCTGGTACTAGTCTCTGTAGCCTTTCTGTTCCTCTCGTTCCCAGCCTCTGAGCAGCCCTAGGTAAGGATTATGTTGGCGTCCCCTTTCTCCTGTACAGTGGGATCCCTCTTATCTTGCTTTCCTTAGGAGTTGACCCCTTCTCCCTGTCTACCTGCAACATCTCCTTTCCCTTCCACGTAGAGGCAAGCAACCTTTTACTCTTCTCTGTTAGCTCTTCTCTGTTAGCTCTGGACTCTTAACACTGAAGCTAATCTTCTGAAATTGCTAGGACCATTGGGGTTTTGGTTGTTGTTTTGTTTGTTTTGTTTTGTTTTATGTCTGACCTGTGATCGTGGTACAGCAGTAGCTGAAATTTAGCCTTGTTTTACTCCACTTCTCCCACTTTTTTTTTTTTTATATATATATTTTGACAAATAAACGTTTCTAACACTTAAGT EMBV3_23376 GACCCTGCTTGCCACAACTAGAGAAAAGCCCTGCAGTAATGAAGATCCAGCACAGCCAAA Gene BVT0102_197269 - 1 EMBV3_12602 GK000010.2:30527331-30916468 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013374 TCONS_00013376 TCONS_00013375 1 XLOC_008107 NonCoding TCONS_00013375 XLOC_008107 NonCoding NonCoding - 10:30720219-30732862 - TSS9948 2449 1 TCONS_00013375_5 201 0.347080440996325 3 0.806517956019617 0.000595544572747655 0.000848805138622424 0.000277449457805801 0.000154789268851925 0.000426382948749296 0.000334408017683421 0.00025446197093999 0.0004587525563003 0.000107925415658789 2.92205409448776e-09 0 0 1.28863594169248e-05 2.99132057371653e-09 3.24310681505018e-09 0 0 0 0.000633975028341764 0.000744529928187863 0.000338631563648732 0 0 0 9.8379559023077e-05 0.000218030673834735 0.000833143363529468 0 3.03985269466256e-09 3.8376891217155e-09 NM_001102188.1 SGCB Bos taurus sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA. 4e-169 600 90.13 0.180481829318089 0 noncoding 1 1 1 1 -2.33120419194528 0.03796698752289 0.0125277105832972 0.87945478096033 CTGTGAGTGAAGCAGGGCCTGGTCAAGCAGGGAATGCACAGAGAGCAAGAGAACAGTCAACTTGAGTGTCCTGACCATACAGCAATGCACACTAGAGAAGAAGGAGACCCAAATGGTGGTGCAGGTTGGTTGTCTTCAGAGAGCCTTCTCCTTGCTTGTACGAACACAGTCATCAGATCTTCTGGAGTTCTGTTTAAATCAGGTGAAAAGGAAAACCACAGCAATATTTTTCTTTTGATAAGAATATATCAGATATACTTCAAAAACTCAACAGCCTATTACTTTTGAGATGATCTTAGGGGATTCTAGTGGCTCAGTGGATAGGAGTCTGTTTGCCAATTCAGGAAACATGGGTTCGATCCCTGATCTGGGAAGATCCCACATGCTGTGGAGCAACTAAGCCTGTGGACCACAGCTACTGAGCCCCTACGCTCTACAGCTTGGGAGCTGCAAATACTGAGCCCATTTCCCCTGGAACCTGTGCTTCTGCAGCAAGAAAAGCCACTGCAATGAGAATCCTGTGTACCACAACTGAAGAGTAGACCCTGCTTGCCACAACTAGAGAAAAGCCCTGCAGTAATGAAGATCCAGCACAGCCAAAAATAAACAAGTAAAGATTTTTTTAAAAAAGATGATTTTAGGCAGAAAAAAGATTTAAGGTGACATATAGTTGAGGTGCTAACACTCAGCATTTAGGTCCCATAATTCCTTTGAAAAACAACTAAGTTTAATATGTGATTTTAAAAATGGTCACTGCTTTCTAAACATATGCATCTTTATTTAAACAGGTTTATATTTTGTCTCCAAAGTGCGTTATACTTAAAATACTGAGCCACTCTCTTTCAAAGCACTGTTGGTTGTTCCGTTTTTGTAGAGATCACAAGCCCACTTGATATTAGTGACTTCTACTTTCCTTTGCTTTGTGAGTGTGGGTAATAGCCTTTTTGTATACCAATTTGCTTACACTGCAGTCTATGCTGGTAATATTGTACATTGCCTGACCTCTGAATGGAAAAATAATAACAAGTTAAAACAGTCATTTTACCTGAAGTCGATAAGGCCATAACACTCACCCTGCTTTCAATTCACATGCTCAATTTTCATCCACTCACTCTCGACTTTGAGAGGAAGGAATAATGACAGGTTACAGGCACTTTATTTCAAAATTCACTCACAAAGTTATTGACAAGCATTTTTCACAGAAACAGCTCTTCTCTCTGACCCTCGTGAGCTGTTTACATGAAAAATGCTCTTCCTTGTAGATTAATGAGAGTGGAACCTAATTCCATACCAAACATGTAGCAATTGCTTTAGCATCGCTGTTTTTGATATGGGAACAAAAATAGGGATAATTTGCCTCAAATTGCAGTCACTTCAGTCATAATAAAATCTCAGAGAGTACTGTTTGCTTTCAACTTTCATTAGGTAAGCTGGGGCTGTTATTAAGGTACCAACACATAAATGTTATATTAGCACTTAACAGAAGCATAGCATTCTCCTCTAGGAGATAAATTCTACCCTTGTCAATATAATTCCTCACTGAGTGCAGTAAAAGAGTTTGAAAAGATGAAATAGTGAAGCTTTGCACTAGAGGAAAAGAAATACCTTGTTCACTCAAGCTTAAAGGCCATTTTGCTGGCCCAAGGTGCTAGGGTACTGTTTAGAAAATAAGTCTCACAGAAACCCTCCTAGGTCAAGCCAAACATTGAGACAAACTTTCAGACATGCTCTCTTTGTCCAAGGTTGTTAAATCAGTTACTTTAAATTTCTGAATGCCTTCAAATGGCATTTCAACTCTGTGAAGAAATATAAGAATTTAAGACCAAGATGGATTTCATTTCCAGAGAGCAAATGATAATCATTTTGTGTAAGCCACTGTACACACAAAACCCACATATTTCTTTTCCTTTTGAGTGTAGTAAGTTCTTTCAAAATGTAAGGTATTGTGTATGTCATAGTGGTGGAGCTGTTAAAATTAAATCTGCCTTTATCCTTACTCTTCAGTTCAGTTCAGTTCAATTCAGTCACTCAGTCATGTCCGACTCTGCAACTCCATGGACTGCAACGTGCCAGGCCTCCCTGTCCATCACCAACTCCCAGACTTTACCCAAAGTCATGTCCATTGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCTTTTCCAGCATCAGGGTCTTTTCAAATGAGTCAGCTCTTTGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTTCAATGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCAATGTTCAAAAGGATCAATTCTTTGGTGCTCAACTTTCCTCACAGTCCAACTCTCACACCATACATGACCGCTGGAAAAACCAT TCONS_00016680 TCONS_00016681 TCONS_00016682 r 3' 183606 TCONS_00016662 r 5' 192883 EMBV3_39330 TACAAGATGGATGCCCCCGACGGCTGCCCACCTGCAGTCTACGAGGTCATGAAGAACTGC Gene GeneID:509246|CSK:NM_001075397:49_cdna Constitutive 0 NULL GeneID:509246 21 GENE CSK MGC142896 c-src tyrosine kinase EMBV3_40033 GTAGGAGGCACTGGTAATGCTGAAATACCCTAGTACAAGGTTAAAAGGCCTGGAAATGAG Gene BVV0102_283209 + 0 NULL GK000016.2:44797199-44801764 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33821 CGGTTCTTTGGACCTGGGGAATTTGACCCCTCTGTTGACGTCTATGCCATGAAGAGCCAT Gene GeneID:539211|PIP4K2B:XM_002695925:303_cdna Constitutive 0 NULL GeneID:539211 19 GENE PIP4K2B NULL phosphatidylinositol-5-phosphate 4-kinase, type II, beta EMBV3_09632 ATTTTTCAACAGGTTGGAAGCATGCAATCGGATAGAGGTCCGGTCAAGGCCAACCCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07541 TTCTCGGAAGCAGTAAAAGCCTGGAGAACCTGAACCTTTTAGGAAACAACCTGGGGCCAG Gene GeneID:529844|NLRP13:XM_002695466:159_cdna Constitutive 0 NULL GeneID:529844 18 GENE NLRP13 NULL NLR family, pyrin domain containing 13 EMBV3_01941 TACATGAAAAGGAACTCCCTTACAACCTTGGTATCTTCACTCAAATAACATAGTTGTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33297 CCACGTTTTGTGGGGGCGAGAAAATATAGACGCAAGAGGCAGAATTCAGATGGAAGCCTC Gene GeneID:533531|SYNPO:XM_002689295:138_cdna Constitutive 0 NULL GeneID:533531 7 GENE SYNPO NULL synaptopodin EMBV3_12650 CAGGAGGAAGTACTGGAGAAGTGCTCCATGTGACATTTCAGGGGGCAAACCCCTGGAAGT Variant GeneID:534915|ASCC1:NM_001076041:374_cdna 544^680 1 EMBV3_40712 GeneID:534915 28 GENE ASCC1 MGC139403 activating signal cointegrator 1 complex subunit 1 EMBV3_09878 TCATCTATCTCGTGTCGTCCTTCCGAAAGCTTCAGACGACCAGCAACGCTTTCATCGTGA Gene GeneID:781302|GPR88:XM_002686166:318_cdna Constitutive 0 NULL GeneID:781302 3 GENE GPR88 NULL G protein-coupled receptor 88 EMBV3_31417 CTCCTGGTGGGACCACGACTGCGATCGGCGCCTCTACTACGTCTGCGAGTTCCCCTATTA Gene GeneID:522611|CLEC11A:NM_001098054:268_cdna Constitutive 0 NULL GeneID:522611 18 GENE CLEC11A NULL C-type lectin domain family 11, member A EMBV3_18754 AAGGAATGGAAAACACCACAGCACTCACACCACCACATTGCCCACCAGGGGAGAAGCCTT Gene BVV0102_287285 + 1 EMBV3_11795 GK000013.2:38722811-38757389 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29338 CCTTCTCTCTCACTGCAATGGTAGCTAGGAGCACATTCCTTCACCCTAGCAAGGAGTTCA Gene BVT0102_274195 + 0 NULL GK000015.2:33976120-33993513 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058898 TCONS_00058890 TCONS_00058895 1 XLOC_036218 Coding TCONS_00058895 XLOC_036218 Coding Coding UBASH3B 15:33874711-33980351 j TSS44279 6602 1 TCONS_00058895_3 516 14 0.937636668275921 0.000531444163912131 0.000107139251626218 0.000162676565663575 0.000227687699547689 6.35258755890281e-05 2.49171756034827e-05 6.95615334343843e-05 0.000270540256334078 0.000210380278171097 7.5247557467464e-05 2.88114052340723e-08 6.08815032248074e-09 8.62831958489131e-06 1.20732045669319e-06 8.70931517306011e-05 0.00466957596006103 0.00116172999080229 5.15235631040421e-05 0.000241031635906346 0.000508647430898331 4.63603228437389e-05 0.00134517746023632 0.000177391595474931 5.55844370392937e-09 0.000148798077171241 0.000180267998805203 0.000230556829055101 0.000212353843847696 0.000102004810649119 1.04694714429947e-05 NM_001206128.1 UBASH3B Bos taurus ubiquitin associated and SH3 domain containing B (UBASH3B), mRNA. 0.0 3993 100.00 0.335201454104817 XM_005271712.1 UBASH3B PREDICTED: Homo sapiens ubiquitin associated and SH3 domain containing B (UBASH3B), transcript variant X1, mRNA. 0.0 3386 82.28 0.506967585580127 TCONS_00058895_3 sp|Q8TF42|UBS3B_HUMAN UBS3B_HUMAN Ubiquitin-associated and SH3 domain-containing protein B; 0.0 1035 97.48 0.998062015503876 3 coding 0 0 0 0 -0.116467792149941 0.558116464608552 -0.0198790439237241 0.70183345871974 ATGCGCCTGGGAAGCCGGAAGACCCTATACCCGCCATGATGCTTCTTTGAGCAGTTCTGCTGTGTGAGTGAGAAGTTAGTCCTCGGTGGTTAGCTGGGGAGCCAGAAGTGATTTTCTGCAGATTTGGTTTGAGAGCTGACTCCTCAAGACCTGGAAACAAAAAGCCTTGGCATCCACAGGAGGAAGAAGCGTTCAGGCAGCATGTGACTGGTTGTTCTCCCACGTCGGCGACCCCTTCCTGGATGACCCCCTGCCCCGGGAGTATGTCCTCTACCTCCGCCCCACCGGGCCCTTAGCGCAGAAGCTCTCCGACTTCTGGCAGCAGTCGAAGCAGATCTGCGGCAAGAACAAGGCGCACAACATCTTCCCCCACATCACCCTCTGCCAGTTCTTCATGTGTGAGGACAGCAAGGTAGACGCCCTGGGGGAGGCCCTGCAGACCACCGTCAGCCGCTGGAGATGCAAGTTTTCAGCCCCACTGCCCCTGGAGCTCTACACCTCCTCCAACTTCATCGGCCTCTTCGTGAAGGAAGACAGCGCAGAGGTCCTCAAGAAGTTTGCTGCCGACTTCGCAGCAGAAGCTGCCTCCAAAACTGAAGTGCATGTGGAACCCCACAAGAAGCAGCTGCACGTGACCCTGGCTTACCACTTCCAAGCCAGCCACCTGCCCACCCTGGAGAAGCTCGCCCAGAACATTGACGTCAAACTTGGGTGTGACTGGGTGGCCACCATATTCTCCCGGGATATCCGATTTGCTAACCACGAGACATTACAGGTGATCTACCCGTACACCCCGCAGAACGACGATGAGCTGGAGCTGGTCCCCGGGGACTTCATCTTCATGTCGCCCATGGAGCAGACCAGCACCAGCGAGGGCTGGATCTATGGCACGTCCCTGACCACGGGCTGCTCTGGACTCCTGCCGGAGAACTACATCACCAAGGCCGACGAGTGCAGCACCTGGATATTTCACGGCTCTTACTCCATCTTAAACACATCCTCTTCCAACGCGCTCTCCTTTGGGGACGGCATCCTGGAGAGGCGGCAGTATGAGGACCAGGGCCTGGGGGACGCGACGCCCCTCACCATCATCTGCCAGCCCACCCAGCCTCTGAGGATCAGCAGCCAGCCTGGCCCTCAGAAGAGATGCCTCTTCGTGTGTCGGCATGGTGAGAGGATGGATGTCGTGTTTGGGAAGTACTGGCTATCCCAGTGCTTCGATGCCAAAGGCCGCTACATACGCACCAACCTAAACATGCCTCACAGCTTACCTCAGCGGAGCGGCGGTTTCCGGGATTACGAGAAAGATGCTCCAATCACGGTGTTTGGATGTATGCAAGCCAGACTTGTGGGGGAAGCCTTACTGGAGAGTAACACCATCATCGACCACGTCTATTGCTCCCCGTCCCTGCGCTGCGTCCAGACTGCATACAACATCTTGAAAGGTTTACAACAGGAAAATCACTTGAAGATCCGAGTGGAGCCTGGCTTATTTGAATGGACAAAATGGGTTGCTGGGAACACCTTACCTGCGTGGATACCTCCATCAGAGCTAGCCGCAGCCAACCTAAGTGTTGATACAACCTACAGACCTCACATTCCAGTCAGCAAATTAGTGGTTTCAGAATCCTATGACACCTATATCAGTAGAAGTTTCCAAGTAACAAAGGAAATCATAAGCGAATGTAAAAGTAAAGGAAATAACATCCTGATTGTGGCTCACGCATCTTCCCTGGAAGCATGTACCTGCCAACTACAAGGCCTGTCACCTCAGAACTCCAAGGACTTTGTACAGATGGTCCGAAAGATCCCCTACTTGGGGTTTTGTTCCTGTGAAGAATTAGGAGAAACTGGAATCTGGCAGCTGACAGACCCGCCAATTCTCCCTCTGACCCATGGACCGACCGGGGGCTTCAACTGGAGAGAGACCCTGCTACAAGAGTAACCGGGCGAGCGAACGAGAAGCAGCAGCTTGAGGAAGGCTTGGGGAGAAGTGTCTGTGTGTGTGTTTAGTACCAGTGGGGAAGTCTGCACCACATCCTAAGTGGACAAAGAAGAATTCAGCATCTTTCAGGCTTTAAAGTTCTTAGGATGAGACTGTGTCAAGAAGAGAAAGACTTGATTCAGGGATAAAATTCATTCTCTCTGGACCCTTTTGAGAATTGTCTTCCTACATCAGGGCACCTGCTACCGTGGAGGGTCTTTTCTCACTTCCGTATGTGCTGGCTAAGGAGCCTGGGTCCTCCCAGAGGGAGCCGCCAGCCCACCCTCAGGAAGGATGCAGGAAGGTCCAGCTGGAGAGACTCCAAGCTGCCAGGCTGGGGATGGGATTTTCTTCTAGACTCCGTGCTCCAGTGAAAGCCAAGCTGCAGGATTCCTTCAAGGTTACTAGGAAACTTGTGGCTTCCCATCAGTTTCAACGCTCAGTGCGACCCACACACTAGTGCTGCTGGCTCAAGACCCCTGCTCGGGGACCCTAACCTTTACACCGGTACCACCCCATCACGTTTTCTCTACAGCTGACTGCAGCTTCTTGCTACGGTCCTACCCTCTTGCTTCTGTCTGTGAAATGGAGAGAGAAAGCATTTTTGCTCTCCAAAGCACTTTTGGACTCAGGAGGAAGATAAGATGCACGTGTTAAGCATTCAATTGTAGGCGCAACAAACTTGCAAAACATCAAGTGACTTGGAGTGACTCGTGTTGTAGCCTAACAAGCCACAGCACTTCTGAATCATTTGCGATTTGCTCGCCTTTGCCCCAAGAGTCTAGACCGTGTTAACCGGTTAAGGATGTTGACATTTTCAAAAGATGTATGTCAGATACATCCTTTGAGTCAGCAAGAAGCTCATTCTTGTGCAATATGGACATCTTTCCAAACCATACCAAGGGTCAGGTCATCATACACTCGCAGTACATGTCGACCAGAACATCCACAAACATGTCCATCACAGCCAGGGATGTACTGCGAAGTCAGGGAATGAACTTAAATGATGACAGTCACGACCACACTGCTGCTTGTGCTGTCGTGTTAGTTCGTCTGTTTTGCTATGATAATTTAAAATAGGTAGGTAGGGCTACTTGAGGAAAGTTGGGAGCTACCACATCCTGTGGTAGCTCATCACACCTGCTTCCTGAATTTAGAGGGAGTTTATTTAAAAGAAAAATAAACGACAATCAAACCAAAACATCAGTTATTGATGCCTAGTTAATTGTGTGACTAGCTGACTGTCGACGGTAGCAGACAGTGGTCTGGCACGGTGTAGTTCACTCTGTAGGATATACCTGCAAAATGAAATCCCAGCCCTTTGAAGAGAGCATTCATGTAAAACAGATCAGTGTATATTGTAGCATTAAATAAGCTTCAAAACCCAAATGCAGAAAACACATGGTATATAAAAACAGATCTGCGCTCCCATTTGAAACCAGAATTTGATGATCCTTGAAAACAGGAGGAAGTGAAAGGATGCTGGCTACGCATGTTAATTAGCAAGAGGATCACTGTTGGGTTTAAGTCACTTAGAGAAAGATGTCATGAATTTTATATTTTAAGAAACAAACCTTGATTTCTTCCAGCACTGCACACTGATCCATCTTCTGGATCTAGAAGTAACTGTGCTGACATGATTGATTACAAGTTTCAGCTCAAAACGGGGGAAGTACATTACAGGTGTTAAGAGAAAAGTCCCATTATGGCCAGTCCTTCTTTTATTTGTACTGAGGTAAGTCCACTGTCACCAGATCTATAATGTTTATTAGATTCTCCACAAATTTTCATGGACTTTCAGTGCTCAGAATGATGCTTGAACATCTCATCTCCGATTTCCTTGAAAAGTGTAGCAGTGTGTGCTGGGCAGCATCTGTACTTATACAGAAGACAGTTCAGAACTTACCCTCTCTCTCCCTCTCTGTGGACTTAGGCCTTTGATGACCTGTTAGGTGGTTTAGGTGGGCTGCAGTCCTATGTGTGAGCAAAGGAAGGCAGAAATCTGAAATAATTTTCTGAATAATTTTAGGTGGAAAACCTTGAGTGAAAGAGTTAATTCCTCTGAGGACCCAGATTGTTGATCAGAATGGCCTGAATGATCTCAATTCACATGAAATTCTCCTTTTCCACATTTACCTACTTGAAAAACTAAACTCAGACGACCCTATTTGAGAAATTCTTTGGAAATTACATTGCATCTATGTATATAAGAAAGAGAAAAGACAACTGTATTATGTGATTTCATATCCATTTAAAATTCTCAGTTGCTGTCTATCACAACTCAAAGTTCAGGCTGGTTCTTTTTGATCTGAGGCTGATGCTTATTAACAAATATTTTGGGGAGTTAGAAAGGAGGAAGGGGAGATGGAAGGAAATGCTAGACAGAAGCAGCAAATGGTTGCTTGTAAGAGGAATTTTTTTTTTTTTTTTTAATGTAGAAAGTTATCTGAAATAGACAGATGAAATTAAAGGATTTAATCTGGGCTTGAAAGTCTGAAACAGTCGGCTGCTCTCACACGTGTGCCACATCATCCCGCTGACAACCCAGTATTATTCACAGATAGACTTTGGTTTCAGTGATTTTAAAATGCCACGTTGATTCCTCTGTGGACTAGAATAATTGGCACATTTTAATGCACAAGCTGGGGTTTCATTTTCCCAGGCTCCTTCTCTCTCACTGCAATGGTAGCTAGGAGCACATTCCTTCACCCTAGCAAGGAGTTCAGAATACAGTGTTTTCCATTACATTTAGATTCATAGAATCTGAATGGCTGATTAAATGGCCATCTGATGGCTGAAAGAGAGGGTATTTTTCACCCTGTATTGAAAGGCTTGGAGGAGTTTCTAGTTTTTATTTTCATTATACTTTAACCAAAGAATTATTTTAAAGTAACCTTATATTTGAAAGATGATTTTGCAAAAAAATAAAATAAAAATAAAAAATATCTTCTGGAGTGATGTCAGTTTGGTAAATCACTGTTTTCTTGCATTTTAGGCTGATGTGGTCGTTTTCCTGTCAGTGGAATCTGAAATGCATATAGATTGTCATCCAGTTGTGCTTAGTATTATCATAAATGTATCTTTTCCACTCAACTAGCTGTGTTCATATTAAACCAAGTCTCTTATTTCAGTCACCTACTGTCATCGGGACTAATTGAAAAACTACAGTCAGAGAAGTTCCTATCTCGTTGCCTTTGTAGAAAGGCAGCCCTATGTGATCAACGGGGAGGCATTCCACGTAACCTAGGCACTCAGCAACTCCAGTGTTTAATTTGAAAGCAGTGATGAATTGCTCTTTTGAATATACTCTTAAGTCACGCGTGTGTCAGAATACAGATGAACCCCCTTTAATTTTCGCAGGCAGTCACAACTGTGCTGTGTCTGCACCAACTCCTCAGATAATGCGGCTCAGGGTTATTTGCATTTAAATTGTAGTCCTGCATGCGCGTGTGAAGGCTCAGAGATGCCAGGAGGGCTGCCTCCCCAGGAGGGGTGTGATCTGCAGAGGAGGGTGGGGAAAGAGCAACTTAGTATCTGTGCTGTTTAGCTTAAAGTTCACTTTAGAAAGGTGATGCGGGATATTTTGTTAGTGATGGCAGATGCTTTTCATGTTTAAACTTAGGATTAAAATTGGATCTGCCTCTTTAATACGTCAACATATTGAATTTTCCTAGGGAAGTGACTGGCTATAACAAAACTTTAAGGGAAGGGAGGAAAAACCTCTGTGCAGAGGAAATAACTTGATTTTTAAATACATATAATATTTTGTTCAGTGTATGTAGGCTTAAAATTATGATGATGGATAGTCAAACTTAATATATAATCAGTTCTTACAATGGTTTTATACTGAACCATTTAGTTGCCATTACACAGAAATTTGAATTTTACAACTGCTCAACTATTCTTGGACTCTGTACAGGATACATATATATATACATATACATATATGTATGTATGTATAATGGGAAACATGTACTGGTTGTTCCTTTGGTTACCACTCAAGATGGGAACAGCACCCTGAAGCATTTTGGTTACACAAAGACCATTCTAAACCTGCTGTTAGGGGAGGTGTATTGATTTCTTTCTCCTTTATAAGGCTATTGTATCATTAATTCTCTGTGTGATTCAGGTGTATTTATTTGTGACAAGGCTTTGTAATTATAAAAAAGGGAACCCACACCTGACTGTATTGCCAGCTCCCTTGTAAACTACCTGTGGCGTCTCGTTTCCTGGTCGCGTGCTCGTCCTCTCCTCAACACAGCTCTGGCACCATTGTAATTAGTTCATCCACCCCATTAGCATCTCCATTTAAGTGGTTCCCAGATGATTTAATAAAGAGAAACTGTGTCCTCAGTCGATCCAGAGCAGTCTTATATTACATTGAGTGGTCTCTTCTCCTACCATGTCTTCAGATGTTACTATGGTCATTATTATTTCATCAGTGTCCATTAACAACTTATTGACCAAAGGCGTTTTATTAATAATATGTCTCATTGCCCAGAGACGTTTCAATACGCACTGACATAACAAACCGCCAACCACAGGTGTTAGTTTCTACAAAATCCCCCCTGATCAATAGTGTTTTAAGAGTGAGACCCCTCCCTCAGAGGACCAGAGG EMBV3_08763 GGCTCTTCTTTCCATGGGATTTTGCAGATAAGAGTACTGGTGTGGATTGCTATTTCCTCC Gene BVT0102_222902 + 1 EMBV3_30241 GK000007.2:35635012-35662598 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220215 1 XLOC_133532 NonCoding TCONS_00220215 XLOC_133532 NonCoding NonCoding - 7:35658702-35659041 - TSS164213 339 1 TCONS_00220215_1 35 0.991150442477876 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0111411901221659 0 0 0 0 0 0 0 0 0 1.48450645788835e-06 0 0 0 0 XM_608560.5 DGKI PREDICTED: Bos taurus diacylglycerol kinase, iota (DGKI), mRNA. 7e-48 194 81.68 0.578171091445428 0 noncoding AGGGGAGGGAGAGAGAAATTAGGAGTATGGGATTAACAGACACACACTAATATATACAGAATAGACAAACAACAAGGATTTACCATATAGCATAGGGATGGGGTTCCCAAGTGGTTCAGTGGTAAAGAATCCACCTGCCAATGCAGGAGATGCAGGTTTGATCCCTGGATAAGGAAGATCTCCTGGAGGAGGAAATAGCAATCCACACCAGTATTCTTATCTGCAAAATCCCATGGAAAGAAGAGCCTGGTGGGCTTGGTCCATGGGGTCAGAGTCAGACACAACTGAGCAACTGAGCACACACACAGGGAACTATAATCAATATCTTGTAAAAATCTA TCONS_00216433 TCONS_00216434 . 3' 3517 TCONS_00216433 TCONS_00216434 . 3' 3855 EMBV3_24078 CGGGTCCTCAACCCAATCCGAGACACCGCACCCACTCCCTTTCCATCCTCAGTCCTGGGT Gene GeneID:100336545|LOC100336545:XM_002699603:121_cdna Constitutive 0 NULL GeneID:100336545 X GENE LOC100336545 NULL hypothetical protein LOC100336545 EMBV3_01947 TCTCCTGCAGAGGTGTGGTGCAATCGCTGAACAAATCCCGATTCTCTTGGTGTTCTGTAT Gene GeneID:509995|LRPPRC:XM_002691251:244_cdna Constitutive 0 NULL GeneID:509995 11 GENE LRPPRC NULL leucine-rich PPR-motif containing EMBV3_40767 ACTAAAAATGATTCGCTCGGCCACCCCGTTCCCCCTGGTCAGCCTCTTCTTCATGTTCAT Gene GeneID:529382|CACNG5:XM_002696234:69_cdna Constitutive 0 NULL GeneID:529382 19 GENE CACNG5 NULL calcium channel, voltage-dependent, gamma subunit 5 EMBV3_35310 TCCTCAGCCCAGTAAGATTAACGTTCAGCTCGGGGCCGTCTTAACTCTCTTGTTGTCCAA Gene BVV0102_173680 + 0 NULL GK000011.2:62820737-62911378 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032197 1 XLOC_018440 NonCoding TCONS_00032197 XLOC_018440 NonCoding NonCoding - 11:62874497-62877045 - TSS23196 2548 2 TCONS_00032197_5 82 0.0812401883830455 1 0 1.06795001244233e-05 8.28168112065588e-05 2.90549071485698e-05 6.51817636942747e-06 7.75066789385366e-06 1.40386637952525e-06 0 0.000324984807924768 2.78693693532582e-05 1.45331080050086e-05 0 1.40333145311081e-06 0 0 3.85101853176526e-06 0.000248774884256186 0 0.000531751795435439 9.28731648562038e-05 1.97566775536301e-05 2.38283528381404e-05 0.000398993042952184 2.88038307013654e-05 0.000236862874652837 8.70138980861943e-05 2.76510674936442e-05 3.90916200624347e-05 1.88484486683187e-05 1.90525944545485e-05 2.35959598351024e-06 XM_608560.5 DGKI PREDICTED: Bos taurus diacylglycerol kinase, iota (DGKI), mRNA. 8e-45 187 79.02 0.08712715855573 XM_005275919.1 LOC101927402 PREDICTED: Homo sapiens uncharacterized LOC101927402 (LOC101927402), mRNA. 0.0 996 77.03 0.491365777080063 0 noncoding GTGTTGTAAATCAACATAGTCTTTTGGTAAATAATATGAGATGATGAAGTGCCAATAAAACATTGAGCCTTTTGGCTTAATTGTTTTCATATTGAGAAAAAAATTCCTAAAACTGGACAAAGCCACAAGCACAAGAGCAACACAGTATCATTTGTAATAGTGGAAAATCTCCACAAACAGGATAATGGGTAACTCATGGTATGTCCACTCCATTTAATACTATGTAGGCAATTAAAATCAAAGTTTTATAAAATGTTAAGAAACAGGATGAAATACTTACAACATAATATTGAGAAAAGGGATACAAAATTGGTTTACACGATGATGACAATTTTGTAAAGAGCACAAGAGAAAAAATTAGAACTACAACAAATGGTAACTAGTCATTCAATGTTTCTTGATGCAAAATCTTAAGTAATTATGGCCTTAACTTTTAAAAAGTAAATAAAAACGATCACTGGATCCAAATGCAATGGTTTTTAATAATTCTTCCTCCTCCATTCATCTTAAAAATATTCAGAGGTATTTTCTTTTTGTAATACAATTTCATAAGCATTGGAATGCTGCCTCCAAAATTATGTGTAACATTACTAATTACAAGTTGGTTGATTGCTCTCAAGTCAGCTGGCCAAACAGGGACTCAACAGCTCTACACAATGTTGGACACTGACTTCTCTATTGTTGTCCTTAAGTGAATAGAACTGGCTTCTGCAGTTACCTCACAAAAATCATTCTGTAATACTTTATGTATGAAATAAGTAAGATTTTTTTGAAAGCAGAGTTTTCTTTTTAAAGTTTTGATGTTTAAATTTATTATTTCGTTTTAAACATTTTCTTGATGATGGGTCTGCTTTTTGTCATATGTTCTTCTTCTGCTATTTCTGTTCAGTTGAACTAGCAAATTGCAACAGCTATGAATACATCTAAAATCAATTCATTTCCAGTCTCTGAACACATACATACAAATGCAAATAGTTTTGTTTCCTTCCCAGTCAATAAACATTTATAGTGATATACATACACATATACATATACATATACATATACACATACATATACATATACACACATGGTTTCCCTGGCGGCTCAGTGGTAAAGAACCCGCCTGCCAATGCAAGAGACACTGGTTCAATCCCTAGATAGGGAGGATCCCCTGGAGAAGCAAATGTTAACCTGCTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGAGTCGGGTGGGCTATATAGTACACGGGGTTGCAAAGAGTCGGACTCTGCTGAGAGATTGAGCACGAACAACAAGCTCCCATACCAGCAGGGGGCGAAATACAATAGGGATAAATTTGACAAGCTGTATAGATTTTTCTTGCTTTAGTGACTGAGCAATAACAAAAATCCAGCACCACCATTGCAAAACAATTGATACTCCAATTTAAAGTGATGCAGTCTCCGTATATCTTACAGCCATTGAGTTGTAAAGAGACAAATGAGGGTCTATTTTAGCGCTCCAAGTTAAGTCGTCTAGAACATTGCAGAGGCGGGATAAACCGTGATGAACTGCTTTTGTCCTTATCTTCCCCCTGATTTGTGTAATTCCTCCACTCAAAAGGGTGGACACTTCTCTGTGGCTGAGGAAGGTGTTTTCCATCCTTGTTTCTTTGCGTAGCTGCTGAGCTTTGCTGTTTTGGAACTATTTTAAATTATTCAAATTGCCCGTTCAGGTTTGGCGAAAGTAAGAAGGAGCAGCCGGTAGCGCTCACGATTGCCGGATAGGATCCCAGGCTCATCATCCCAGACGATAATAATCCCCGCAGTCTTGCAGTCTGGTTTTTACAGTGGCTGGTGTTCTAACAGATATTCATTACAAAGGAAGGGGAAAGGTTATAAAAACGCAAACGATCAAGACTGACGATAGAAAAATGTTATGACCGCTGTTATAGAAACGCACAAGTTAATTTTATTTCTTTACTTTAATCGAATAGTCTTACGCAGCATATATGAATAAACGACCACCGTGTCAATCTGTTAGCAGAATCCCCAAAATTTTTGTTATTGTTGGTCTCAAAGACGGTTTTCAGTTCGGCGGGTGCTTTCCCTCTTGCTTCCCATTTTAAATTTGATTTAACTCTTCTTATATATCAACTTCCTCTTCTGTCAGCGTAAATTAAAAAAGAGGAAGGGACTTAGACTGTGAACGAAAAAGTCGTTTTTCGTGGCGAAAAGGGCAAGCTAATAAGTGCTCTCCAGTAGGTTTCTGGTGAAGATACAGTTCCGTACCTCAAAACCTTTGCAAATTTTACTTGGACAACAAGAGAGTTAAGACGGTCCCGAGCTGAACGTTAATCTTACTGGGCTGAGGAGCACCTGCCCCTTGCTCGGAGCGCTGTCTCAGGAACGGCGGAGTGCAGGAGGACGTCTTTCCCCCCACCCCACAGCTCGATGACTCGCTAGGAAGTCAGGAAAGGGCAGCTTGCCCGCACCCAAAATGGCTGCCGGCGCTCTGCACGATGGCGCCTGCGCAGGGGTAAGCATTCTGTGACACTGATTCCCTCTGTGTGTCCTC TCONS_00025121 TCONS_00025122 TCONS_00025123 TCONS_00025124 TCONS_00025125 TCONS_00025126 TCONS_00025127 TCONS_00025128 TCONS_00025129 TCONS_00025130 . 5' 73 TCONS_00025121 TCONS_00025122 TCONS_00025123 TCONS_00025124 TCONS_00025125 TCONS_00025126 TCONS_00025127 TCONS_00025128 TCONS_00025129 TCONS_00025130 . 5' 73 EMBV3_34408 GAACATGACTATCCAGGCTTGGGCAAGTGGAGTGTCAATCCATATCTACAAGGACAGAGA Variant GeneID:508224|SCG5:NM_001045998:40_cdna 526^579 1 EMBV3_15581 GeneID:508224 10 GENE SCG5 7B2 MGC128496 Sgne1 secretogranin V (7B2 protein) EMBV3_10690 TGACAAAGGAGGCAAAAAGATACAATGGAGAAGAGACAATCTTCAATAAGTGGTGCTGGG Gene BVT0101_044421 + 0 NULL GK000030.2:118271532-118469010 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248106 TCONS_00248107 TCONS_00248105 TCONS_00248108 1 XLOC_151487 Coding TCONS_00248107 XLOC_151487 NonCoding Coding - X:118441500-118452793 - TSS185606 2032 4 TCONS_00248107_8 57 0.642716535433071 4 0.820403825717322 0.000484819277852946 0.00158493776069754 0.000966353961992939 0.000699118101631191 0.00109887783799079 0.000171788713279479 0.000943806867119522 0.000232907075344087 0.00173623210874824 0.000407631289775352 5.5922581382297e-06 8.22315717456238e-05 0.000422250101593068 0.00116936801048563 0.000407343232945969 0 0 0 2.58483218069531e-08 0.000933897201459288 0.000451207776074625 0 0 0.000148503091632346 0.00191079945218305 0.00131958432677706 0.0015306134358885 3.91823874023925e-05 1.18272649433791e-05 0 XM_005228560.1 ZFP41 PREDICTED: Bos taurus ZFP41 zinc finger protein (ZFP41), partial 6e-52 210 79.70 0.12746062992126 NM_001178101.1 ZNF37A Homo sapiens zinc finger protein 37A (ZNF37A), transcript variant 2e-19 102 73.23 0.0949803149606299 0 noncoding 1 1 1 1 0.020172607973419 0.872860329984852 0.0725361729181006 0.363570456806551 CAACCAGGGATCGAACCTGAGTTTCCTGCATTACAGTCTGCTTGGTGATCCTGTCTCCTGCGCTCGCTGGGGTGTCACTCTAGGACCTTGCTTCAGACAGGGGAGGATCCAGTGACAAGTCTACAGCCTGGAAAAGGGTCTTCACCTGACCACTGGGCACCTTGATCTCAGACTTTCAGCCTCCAGCACAGAAGTGGATCAAAATAGACTGCTGCAACTTATGTCAAAGAGTGTTCTACCTATGTTTTCCTCTAGGAGTTTTAGACTATCAGGTCCTACATTTAGATCTTTAATTCATTTTCGAGTTTATTTTTATGTACAGTGTTGGATAATGTTCTAGTTTCGTTCTTTTACATGGAACTGTCCAGTTTTCCCAGCACCACTTATTGAAGATTGTCTCTTCTCCATTGTATCTTTTTGCCTCCTTTGTCATCAATTAATTGACCATAGGTATGTGGGCTTTCTGTCCTTTTCCATTGATCTATAAGTCTGTGTTTGTAAAAGTAAATCAATATTTGTTAATTATGTAAAATGAATAATTTCTGGAAAATTCTTACAACTCTACAACAATGACATTGAAGAACTATTGAAGAACTACCACTATTTCAACAATATGGATGAGTATCAAGCCAAATGTTGATCAAAAGACAGTAAAAATTATATACCTATTCATTCTATTTATATAAAATTTAAAAGCATGTAAGATTATATTAGAAGTCAGGATGCTGTTACCTTTGGAGAGGTAATAGTAATAACACAAAGATTGTGCTTCTGTGTTTCTGGTCATGTATTGTTTCACCTATGTCAGGATCATGTGAATCTGTTTCTTTTTTGATAATTTGGACAGTACTCTTAAGATCAGTGAACTTTTCTGTTTATGGTTGTCTGTGGAAGTGCACATGGAACAAATAAAACTGAGGCTGCAAGAGATCACATTAACTGCCCAAGATCATATAAATGTTCAGTTAGCCAGGCTGCCTGACTCCAGTTTCAAGCTCTTAGAATTCCCACAACTATCCTGTGAGGAAGGCATTATCAACATCGTTGAGTGAAGAATCTGAGGTTCAGAGAATTAGGTGCCTTGCCCAATCTCAAAGCTAGTTGGTAAGTGATGGAGCCATGATCTGTATAAACCCAGTTTCTGTGTGCTTTTATTTCATTTTGCCACATATCATGTGGGATCTTAGTTCTGCTCCGCCCCACCCCCCCCCCAGAAAAAGAGATGGAACCCATATCACCTGCATTGGAAGTGCCAAGTCTTAACCACGGGAACGCCAGGGATGTCCCTCTATGTGATTTTAGTTCACCACATAATTCTCCCGAAAATGGGAAAAATAGATGATACTGGTGTCATACAAATAGCACATATAGAAACCATACTGCTGATCTGGAATGATGTCCATGGTATACTTAAATGAAATCAAACCAACAGGGTACAGAGTCTCGTGTATGGTATGCTGCAATTTGTGTCAAATTTGAAAATCTTTGTATATGCATTTGTGTATTTTCTCTCCTAAATATCTCTGGAAGGATCCCCAAGAAAGTGGTAACACTAAATTGCCTCTGGGAAGGTGAGCAAGGTGGCTGAGGGACAGAAATAGAAGAGAGAATTTTACTTGTTGACCCTTTAAATCATTTCAATTTTGAAACATGGGAATATACTATGTATTAAAAAATCATTTAAAAATCTTAATTCTGCCTGCAACCAAAGTTAAAGCTCCCCAGGGTAATGAATGAACAGTACTTAGAGATCAGGAACTCAGGATTTTCTGGGACTCGGTTTACATCTTCATTTTGGGTGAACACTTATTTTCCTTGTATCTCAGGTTCTTAATCTTATAATGAAGTGAGATTGTGTGTTAGCTCCTTCTTGGCACTTTTGGAAGGTCAGTGGCGTAAAAACTACAGTTTTTTTTTTATGATTAAAAGTGCTTCTCCCACATGACATCTCACTAGAACATGATCCTTTGCTTTCTGTCTCTTTCCTAAGTGAACACACCCACCAATGGCCCTGTCTAATCCCTCCTCATTC TCONS_00245567 r 5' 91140 TCONS_00245567 r 5' 81689 EMBV3_43412 GGGCAAACTGTACCATATCAATGCCACCAAGAGCTGCCACACCAATTCCTTCATACTCCC Gene GeneID:282007|PRP14:NM_001097562:26_cdna Constitutive 0 NULL GeneID:282007 23 GENE PRP14 NULL prolactin-related protein 14 EMBV3_27201 CGCACCAGGTCTTGTAGCAGCGCCTCCTCGATGAGATCGTGGGGAACCTGGGTGAAGGCA Variant GeneID:505499|CLK3:NM_001034248:43_cdna 443^539 3 EMBV3_20639 GeneID:505499 21 GENE CLK3 MGC128892 CDC-like kinase 3 EMBV3_26341 ATTGATGAAGCTGGTACCTTAATGGTGGTCCTGGGAGAATGCACCTACACACCAGCCAAG Gene GeneID:618389|BSP30C:NM_001076503:1342_cdna Constitutive 0 NULL GeneID:618389 13 GENE BSP30C NULL common salivary protein BSP30 form C EMBV3_30387 CGCAGCTGCAGCTGGACGAGCGCTCGCACCCGCCGGAGTGGCCGAGGCCGTGGTGGTCGT Variant GeneID:282476|SLC25A1:NM_174656:25_cdna 88^295 1 EMBV3_20750 GeneID:282476 17 GENE SLC25A1 NULL solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 EMBV3_30132 CATGGCCTGGTCCAAACCAAGAAACGTACAGTGGTCTTCGAGGGGCAGCACGAGGTGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22272 ACACAAAGAAACCTGGAGGCAGGAGGAGCAAATGTGGGGTCTGCTTCCTTTCAGGGACAT Gene GeneID:530059|SH2D2A:NM_001105401:156_cdna Constitutive 0 NULL GeneID:530059 3 GENE SH2D2A NULL SH2 domain protein 2A EMBV3_32872 TTATGTCATGTGCGTCTGTCCTCTCTCCTATTCTCTTTCTGACATTCCAAACCAGGCCCC Gene GeneID:768240|HOXB4:NM_001078114:183_cdna Constitutive 0 NULL GeneID:768240 19 GENE HOXB4 MGC142710 homeobox B4 EMBV3_01292 CTTTCTAAAACTTCAGCATTTTTCCTTTCTGATCTTTCTCAGTCATTTTCCCCAAGCTTG Gene GeneID:317721|MFAP3:NM_001166519:17_cdna Constitutive 1 NULL GeneID:317721 7 GENE MFAP3 NULL microfibrillar-associated protein 3 EMBV3_37096 ATATAATAATACCTGCTCTTTCAGCCATCTTGGACCCTGTGAAGGCCTGCTGGGAACGGG Gene GeneID:781576|LOC781576:XR_083634:113_cdna Constitutive 0 NULL GeneID:781576 3 PSEUDO LOC781576 NULL similar to ribosomal protein L35a EMBV3_27942 TCTCTTACACTGAAACAATGGAAGTTCATCTTGAAGAAGGTATTGAGGTGTGCTGGAGGG Gene GeneID:506557|PB1:XM_002697017:430_cdna Constitutive 2 NULL GeneID:506557 22 GENE PB1 NULL polybromo 1 EMBV3_21723 TGCTTCTCAACAAGCTCATGGGCAAAGAAGAGAACACCTCTCGGAACCGCCGCTCGCTGA Gene GeneID:522521|ARHGEF18:XM_002688833:135_cdna Constitutive 0 NULL GeneID:522521 7 GENE ARHGEF18 NULL rho/rac guanine nucleotide exchange factor (GEF) 18 EMBV3_13696 AAGATGGACAACATCAGCCGAGCCGTGGGGGGGAGCACACACAGTCTTCAGTTAAGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05151 AAGCATTTCTGGCTCGTGTGCAGAGTGGGATTCTCGAAGCAGCGAGGGGCCTTCTGAGTT Gene GeneID:509058|CRY2:XM_002693564:237_cdna Constitutive 0 NULL GeneID:509058 15 GENE CRY2 NULL cryptochrome 2 (photolyase-like) EMBV3_22604 GCGGCTCGGCGGTCCGGCCGGCGGTCGCAGACCTTCTTGGAGCAGTCAAAGACCCGATTC Variant GeneID:525394|ARFRP1:NM_001037607:1156_cdna 56^154 2 EMBV3_37207 GeneID:525394 13 GENE ARFRP1 MGC134154 ADP-ribosylation factor related protein 1 EMBV3_19195 TGAGCCCATCAGGACTCAGACGTTCCGTGTGGTGTCTCATCCCTGCCAGACATCCTGCTA Gene GeneID:785155|KRTAP13-3:XM_002684594:29_cdna Constitutive 0 NULL GeneID:785155 1 GENE KRTAP13-3 NULL keratin associated protein 13-3 EMBV3_12355 AAGGGCTCATCACTTGTTCTGTCTTCCACTTGTACTGCCACAAGACCGTCCGTGTTCCTT Gene GeneID:539427|E2F5:XM_002692830:183_cdna Constitutive 0 NULL GeneID:539427 14 GENE E2F5 NULL E2F transcription factor 5, p130-binding EMBV3_22735 CCTGCCAGTATATTTGGCTTTGAACAGTGCTATCCCAGCAGCCAGTCATTATTTTGTCCC Gene GeneID:781884|MOBKL3:NM_001083526:149_cdna UTR3_Alt 3 NULL GeneID:781884 2 GENE MOBKL3 MGC137798 MOB1, Mps One Binder kinase activator-like 3 (yeast) EMBV3_17381 GAAGCTGATGCACATTGCCTTCAATGACATGAACCCCTTTCCCATGAAACAGCTGCGCCA Gene GeneID:513828|TBC1D2:NM_001101981:26_cdna Constitutive 0 NULL GeneID:513828 8 GENE TBC1D2 MGC151506 TBC1 domain family, member 2 EMBV3_21140 AAATGACTATATTTTATATTATGGTGGCAAAAAAAGAAGTAATTTCAGGAAAAGGCCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20099 CTTCACAGCATTGGTCTCAGAAGACTGAGGGAAAGTCATCCTGTGATGGCGGTTCTCTGG Gene BVT0102_270984 + 1 EMBV3_28250 GK000027.2:14319980-14445324 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19012 ATGCACTTCCTGGTCTTCTTCCTGGGCCGTATGGTACACACCGTGGCATACCTGGGGAAA Gene GeneID:282019|PTGES:NM_174443:473_cdna Constitutive 0 NULL GeneID:282019 11 GENE PTGES MGC142507 prostaglandin E synthase EMBV3_31238 CGCAGTGAAAATCTTTCTAAACTCTTCTTTGTGTACCTGAGTGCTCCTGAAGGATGTGTG Gene GeneID:515609|WDR93:NM_001075722:117_cdna Constitutive 0 NULL GeneID:515609 21 GENE WDR93 NULL WD repeat domain 93 EMBV3_18282 ACGACCGCAGCGTGTCCAGCTCGTCATCAGAGGCCAGTCACTCGGACGTCAGCGCCAGCA Gene GeneID:524590|DOK7:XM_002688418:34_cdna Constitutive 0 NULL GeneID:524590 6 GENE DOK7 NULL docking protein 7 EMBV3_40807 CAGGACATTTCTAAAAGGGGCACCAAAAGAAGGGGAAAAATGCAATACAACAGTCGTGGG Gene BVT0102_183155 + 0 NULL GK000001.2:44254836-44261476 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000456 TCONS_00000457 TCONS_00000460 TCONS_00000458 TCONS_00000455 TCONS_00000459 TCONS_00000454 TCONS_00000453 TCONS_00000452 1 XLOC_000130 Coding TCONS_00000458 XLOC_000130 Coding Coding TBC1D23 1:44199283-44255977 = TSS238 3663 1 TCONS_00000458_3 685 18 0.935706348226412 0.00157374595842404 0.000685008070361539 0.00119886960526646 0.000672863483420928 0.00129507321534887 0.000209388689792189 0.000689881876791978 0.000630349982205311 0.00113276832622818 0.00117624536288906 0.000553584085591452 0.000108225665960439 5.38977323955399e-05 1.33430830706453e-07 0.000121523118543895 0.00789343052283455 0.00210808716447355 0.00223203414856911 0.00111943376891925 0.00204609493193869 0.00067087249503382 0.00176806770153719 0.00154458316388475 0.0033628969275915 0.00139827713617532 0.000626350343962946 0.000340582284201413 0.000769646802670804 0.00046163770247613 0.00056742902790971 XM_002684708.3 TBC1D23 PREDICTED: Bos taurus TBC1 domain family, member 23 (TBC1D23), 0.0 6607 100.00 0.999726999727 NM_018309.4 TBC1D23 Homo sapiens TBC1 domain family, member 23 (TBC1D23), transcript 0.0 4679 88.71 0.999453999453999 TCONS_00000458_3 sp|Q9NUY8|TBC23_HUMAN TBC23_HUMAN TBC1 domain family member 23; 0.0 1347 95.00 0.998540145985401 2 coding 1 1 1 1 -0.00118416428771281 0.994989473546912 0.00620880430560507 0.937286248421531 GTCCACTTTTCGGCAAAGTGACGTGGACGTCAACAGCAATGGCGGAAGGAGAAGAGGTCCTGCCACTGCCGACGTCGGGCGACGAAGGCTGGGAAAAAGATCTTGAAGAAGCTCTGGAAGCAGGAGGTTGTGATCTTGAAACTTTGAGAAATATAATTCAAGGGAGGCCACTGCCTGCTGATCTGAGGGCTAAAGTTTGGAAGATTGCTCTAAATGTTGCAGGAAAAGGTGATAGTTTGGCATCATGGGATGGTATTTTAGACCTGCCAGAACAGAACACTATTCACAAAGATTGTCTGGAGTTCATTGATCACCTTTCAGTGCCAGAAGAGAAGGCAGCACAATTACTTTTGGATATTGAATCTGTAATTACCTTTTATTGTAAATCCCGTAACATTAAGTATAGCTCAACCCTTAGCTGGATACATCTCCTCAAACCGTTGGTGCATCTTCAGCTGCCACGCAGTGATTTATACAACTGCTTTTATGCAATCATGAATAAGTACATTCCCAGGGATTGTTCCCTGAAGGGGAGACCATTTCATCTTTTCCGATTACTCATCCAATACCATGAACCTGAGCTTTGTTCTTTTCTTGATACAAAGAAAATTACTCCAGACTCCTATGCACTCAACTGGCTTGGAAGCCTTTTTGCCTGTTACTGTTCCATTGAAGTCACTCAGGCAATATGGGATGGATATCTACAACAGGCAGATCCATTTTTTATTTATTTCTTAATGTTAATAATCCTTGTTAATGCAAAAGAAGTCATTTTAGGGCAGGAGTCTGACAGCAAAGAAGAAGTTATCCAGTTCTTGGAAAATACTCCATCCAGTTTGAATCTAGAAGATATAGAAGACCTTTTCTCTCTGGCTCAGTATTATTGCAGTAAAACACCAGCTTCATTTAGAAAGGATAATCACCATCTGTTTGGCAGTACTTTGTTGGGAATTAAGGACGACGATGCAGATCTGAGTCAGGCTCTTTGCCTGGCTATCTCAGTGTCAGAGATCCTTCAAGCAAATCAGCTTCAAGGGGAAGGAGTCCGGTTCTTTGTGGTGGATTGCCGTCCTGCAGAACAGTATAATGCTGGGCATTTATCGACTGCTTTCCATTTAGATTCAGATCTGATGCTCCAAAATCCATCCGAGTTTGCACAGTCTGTAAAATCTCTGCTGGAAGCACAGAAGCAGTCCATTGAGTCTGGCTCCATCGCTGGTGGGGAGCACCTCTGCTTCATGGGCAGTGGCAGAGAGGAAGAAGACATGTATATGAACATGGTCCTTGCACACTTTTTACAGAAAAACAAAGAATACGTGAGCATTGCCAGTGGAGGATTTATGGCACTGCAGCAGCACCTGGCAGACATCAATGTGGATGGACCAGAAAACGGATATGGCCATTGGATTGCTAGCACCTCAGGTTCAAGGAGCAGCATCAATTCTTCTGTGGATGGTGAATCTTCTAATGGTTCAAATGATAGAGGAATGAAATCATTAGTTAATAAAATGACTGTTGCTTTGAAGACAAAATCTGTTAATGTCAGGGAAAAAGTTATCAGCTTTATTGAGAATACATCAACTCCTGTGGACCGGCATGTGAGCAGCAGTGACAGAGTGGGTAAGCCTTATCGTGGTGTGAAGCCTGTTTTCAGCATCGGGGATGAGGAAGAATACGACACAGATGAAATCGACAGTTCTTCAATGTCAGATGATGATAGAAAAGAGGTTGTGAACATTCAGACTTGGATAAACAAGCCAGATGTCAAGCATCATTTTCCTTGTAAAGAAGTGAAAGAAAGTGGACACATGTTTCCTAGTCATCTGTTGGTTACTGCAACACATATGTACTGTTTAAGGGAGATTCTTTCACGAAAAGGATTGGCCTATATACAGTCTCGACAAGCACTAAATTCTGTAGTTAAAATAACATCCAAAAAAAAACATCCTGAGCTAATTACCTTCAAGTATGGAAACAGTAGCGCTTCAGGAATAGAAATCTTGGCAATCGAAAGGTATTTGATTCCAAATGCAGGAGATGCTACCAAAGCCATAAAACAACAGATCATGAAAGTTTTGGATGCTTTGGAAAGTTAATATAAACGAAAATTATTTCAAAAGAAATTAAGGCAACCAAGAGAAATATGGACATATTTTCCTGACTGAATACTAATTGGAGACTTTCATTTGCTTATGGGGGTGCTTAAATAGCAAGTCTAAGAAAGTATAAAATTATTATAATCAATCTCTGGACAGTTAAATTTTTTTTAAATTTTTTTTTGCATTTTTGGTTTTGTAAAATGATTTCTTATAAAGGTCAGTTATCAAATGACTTGAAAGTAGCTGACCCTGTGCCCTTATAAACTAAGGGTGCAGAATGCAGTTCTGTTTTGAAGAGCTGTTTTAAGAGAACATGCATCAGTTTCAGATTTAAAAACAACCATACACATGTGTATTTGCAATGTCTTCACTGAAAATTAGAGATAGAATTCACTGAAGAGACCCCTTTAATTGCTACATTTAGTTTTACCCACTGAGCAGTATCAGAAACTAAAAAGTATTATATAGATCAATAATTAGTTTGCCATTTCTGTTCTTAAAAAGAGTGAAATCTTTTTAATAAAATGGATGAAGATTCCAGCCAATTCAAATTCAGACCATCTAGTAAAATGTTGAAACATCAGTTTCTAAGTCATCTTTGTACCATTAGCTAATAATCTTAACACTGAGTGCTTTAGATACTACACTTCATCTTAATTGTATCTAAGGAGCAATTAAAAGCATTATAATAAGTAGGTAGGCATGTTAAGATTAAAATTAACACTTGGGGGACAAAATTGTATCTTTACAAGTGTCATTGGTCTCTATTACAAGAGGAGTATTTGATTTAGGATATTTCAAAACAGGTGCTGAGCACACATGGATTTATCTTCTGTGAGATTATGTCTGTGACCACACTAATACTGACTTAAAGAAAAGCTAGATGATCGGAGAGCTGTATAAACTAGTTTTTATCATCACTTCATGAAATATTTTTCTCTTGTTTTTTTGTTTTCTTATTAAAGTTCTAGTGGTTTGAAATGATTTTTATTCTCTTAGTATGACAAAACTGCAAGTGGTCTGCTTTATTTTGCAGCTTTCTCAGTTTAATTCATTGAGTTTTGTGTTAGACACATTTGGTGAAAGAAATCCAGGAACACATTTGGGGCCATGGAATGACTGCTTACAAAAATCTGTTTGGGAAGTAACAAGTCCTCACAACCCGCCATGTCCTAAAATGTCATGGATTATCTCTAGGGGTTGATAGAAATATTCAGATGTATCCTGTTTACAGCCAGTTATTTTAATTTACTTAAAGGAAATCAAGTGAATAAAAGGCAACATAGTTCAAGATATTTTATTCTCGTATCTAAATAAAAACAGTTTGAGTGGTTGAAGACATTTGCATGAAACTGCACCTGGTACAATACTTGATATTTATAACTCCCCACGACTGTTGTATTGCATTTTTCCCCTTCTTTTGGTGCCCCTTTTAGAAATGTCCTGAAGTCTCATTTTTTGCCCATTTCAGCCATGGGACTTTTTTCATAATATTAATGTAAAGATGTTTGTGTTACTCTTTATAAATTACAGTTGTAAATAAATCAGTACAATTTGCTCAAAA EMBV3_42846 AGATTCTGTGCTTTCTACCCAGGAACTGTCGATGGGCTCTGTGGTGACATGACCCTCCTC Gene BVT0102_180786 + 0 NULL GK000012.2:72204485-72290833 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035566 1 XLOC_020941 NonCoding TCONS_00035566 XLOC_020941 NonCoding NonCoding - 12:72257602-72259559 - TSS26051 1957 1 TCONS_00035566_6 95 0.40929994890138 1 0 2.77000753648529e-05 1.02376395350491e-05 2.73448186706201e-05 5.26214981399381e-11 2.49077650228136e-11 1.79003997640825e-05 1.27026502346479e-05 7.98224890334453e-05 6.27296221463854e-11 5.04381639306476e-05 1.3619620544399e-11 1.52260601622363e-07 4.17495015649491e-07 2.94014355765324e-11 4.71657046315122e-07 0 0 0 6.68541949911232e-05 4.3505481201103e-05 7.88491245470162e-05 0 0 0 0.000178166645105617 0.000342898820934633 2.3647720708571e-05 9.38038288002631e-11 5.1384600236559e-06 4.08394997329975e-07 XR_228400.1 LOC101910129 PREDICTED: Bos taurus uncharacterized LOC101910129 (LOC101910129), 2e-134 484 92.49 0.16709248850281 0 noncoding TTATTCAACATCTCATATTTATACAGAAAAGCGTGAGAAAGACAAGACAGTTGACATTTTTTCTTGGTTGGCCTATACATCTTACAGTCACAAGAAATCTTGAGAGCATGGGAATGGCTCCCTGTTATTATTTCTTACACCAGATAACATTTCTCTGTGCGTGAGAAGTTTGCACAGAACTCCAGGTGCCTGCAGTAAATAAGCGCGTAATCTCTGGGGTGGCAGGACAGAGAGCTATGTTTGCAAGCAAACCCTCAAGGACTGAGGCAGCTCCTAGAGCTGTGTCCTTCGGACAAAGGACCCCGTTCTCACGGCAGCTCCCCGCACACCTGGCTTCTATAAGGGAGGGAGAAATGAGTTTCCAAGGGTAAGCATCACGTTTCAAGGGAACAATGCAGACCACACTTGAATTTAAGAATCAAACAATTTTCTTGGCTAGTCTAGTGCTTCTCCCTTATCTAAGTCTCTAGGAGAATCCTACTGTTATTGGGCATAAGAGGATTTTATTTCTTCCTGTTTTGTCACCTATACTTCTGAGTCATACCTCAAAAATGGTCCTTCTGCCAGGAGTCACTTGCACCCATAGAATGAGAAGTTTGATTCAGAATGAGAGGAGAGCTTTATTCCCAATAAAGCGTGAGAGGTAGGAGTTTGGTCTAGAGCACATGCTCTCCCCCAAACCAGCAGGGCTGTTTTATATGATTCCTGTCAGCTGGGAGGGGGCGAGGGTCTCCCAGGAGGGCTCAGCTGTGCTGCTTGAAGCTCCAGATCACAGTGCCGGGTGCGATATCTCTGTGCATGGCCCTCAGAGCTAAGGTGTGGCCATTTCGCATCAGGGCATCTGGTATGAAAGGCTGGGTGGAAGGCCTCTGCTGGAGGCACTCTGTGAACAAGTGAAGCTCAGCTCAGCACAACGAAAAAGAAAAAAGGTTAGACTATTTGATGAGCAGATTCTGTGCTTTCTACCCAGGAACTGTTGATGGGCTTTGTGGTGACATGACCCTCCTCTGTGCCTGTCCTTCTCCTCGCCCAGAAGGTGCAGGTCCAGCTCCTGCAGCTGCTTCCTGTTGAGTGTGGGGTCGTCAGGACCTGGAGAGGAACGAGACCTCTCTCACCTCCTCTGGACGCGTCTGGTGCCCCTGGGTTCAGCCCTAACTGTTCTGTCCCTGAGAGACAGCCGTCTGGAGTTTTCTAGATTCTGAGGATCATGGAGGGGCGCAGGAAAGGACAAACCCAGTGGGGCTCATGTGGCCCCATCACCCTGGTCCCGGATTGTTCCCCAGATGAGGCAGCCTGGTGTCTGCCACCCAGTGTCCATCTACACCTCCTTCAGTGAGGCTACGTGCATCCTCATGAAAATAGCTCCACATGCTGCCCGGTGTGCAGACCCCTCCCCAGGCAGCGAATGGGAGATCAGAGCCAACTCAGTCCCCAGAACCACCCCAGCCAGGGAGGCAGTGGGCTTATGTCACACTAGAAGTCCAGGCGGGTCTCGTCAGACCGTCACAAGGGTGGCTGTTACTTTTTTCATGGTGAATGTTGTATGTGGTTCCTTTGGCCAAGGTCTCTAACTGCCCTGAGTGCAACAACTCCTGCAATTAGTCATTTGCTCTTTGGGGACACACTTTTATTGTTGTCTGGAAGAAAGCTTCAGGTCAGAGAGATATTCACACAAGTAGTCAAGGGGGTCCACTTGCTCGAGGTTGTCTCCTCATAGGTGGGTGCTCAGGGCCCCTTCTCTCAAGTGTGATGTCCCCATGGAGTGACCTTCTACACCTTCTGGTTGATGGTAGTCGGCATCACCAGGTAGGGTCTGCTTCTCTCAGGAGTGATTGGTATTGCGGGCTGCTGGTTTTCGGGTTTTTAGATCCACCTGATCCTCTGGCTGGAACGAGTGGAAGGCAGGTGAGCAGGTGCAGCCTCACCTGGTTACTACCATAGTTTCTCCTACCTGGAG TCONS_00037219 r 3' 23012 TCONS_00037219 r 3' 24968 EMBV3_08800 TCCTGTGCTGCATGTCAGTCTGGTGTTTAAAGGAATGTGTTTGTTGTACCATGTGGACTC Gene GeneID:509305|COG6:NM_001035069:73_cdna UTR3_Alt 2 NULL GeneID:509305 12 GENE COG6 MGC127384 component of oligomeric golgi complex 6 EMBV3_09938 TAAACCAGCAGACCCGTTGGAGCAAGTCCTACTTCCGAGAGTGGCTGTACAATGCGATGT Gene GeneID:504273|LOC504273:XM_002687762:83_cdna Constitutive 0 NULL GeneID:504273 5 GENE LOC504273 NULL similar to hyaluronan synthase 2 EMBV3_07089 CCCTGTTTAGCCATGTGGATACCTACGGAGCACGAGAAATACGGCGTGGGTGGATTCTTT Gene BVT0102_034765 + 1 EMBV3_31720 GK000004.2:56128666-56366862 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42271 CTGAGAAAACAGCTGAATGCCAGGATGAGAACTCCAAAGAAGAGGCGCAGGGCACCAAAA Gene GeneID:100336657|LOC100336657:XM_002699485:2_cdna Constitutive 0 NULL GeneID:100336657 X GENE LOC100336657 NULL cancer/testis antigen family 147, member B1-like EMBV3_02702 GTACAACTTTCCAAAACTGGCCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGC Gene BVV0102_143494 + 0 NULL GK000028.2:10879520-11180347 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15119 GCTGCTCTGCACACGGCCCAGTAGTCCCATTTCCTTCCACACCAAAAAAGTGTTAAATCA Gene BVT0102_201355 + 0 NULL GK000013.2:33518737-33619258 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042502 TCONS_00042507 TCONS_00042506 TCONS_00042509 TCONS_00042503 TCONS_00042510 TCONS_00042508 1 XLOC_025677 Coding TCONS_00042502 XLOC_025677 Coding Coding EPC1 13:33451612-33520066 j TSS31618 4080 1 TCONS_00042502_5 813 14 0.940601580646575 0.00329223445073489 0.00182069410308442 0.00229348220274135 3.35385829522588e-07 0.00176414652987255 0.000485130491082222 0.00184674882990969 0.000811103601026775 0.00256815642909362 0.000175079741161392 1.67555511339264e-12 2.30936189330685e-07 0.000189850344876971 0.000356765221905047 0.000451864858759278 0.0017653649897917 0.000560712638874865 0.00180653061923461 0.00203809757077171 3.85837217454094e-07 3.73855584739378e-08 1.11603257593632e-07 0.000804784785834271 0.00269084974116854 0.000353764712104979 3.82974519772256e-05 0.00112936715417562 3.83543557643319e-06 0.000398132472209828 1.46730961875961e-05 XM_005214214.1 EPC1 PREDICTED: Bos taurus enhancer of polycomb homolog 1 (Drosophila) (EPC1), transcript variant X1, mRNA. 0.0 7310 100.00 0.993137254901961 NM_001272004.1 EPC1 Homo sapiens enhancer of polycomb homolog 1 (Drosophila) (EPC1), 0.0 6049 92.95 0.99828431372549 TCONS_00042502_5 sp|Q9H2F5|EPC1_HUMAN EPC1_HUMAN Enhancer of polycomb homolog 1; 0.0 1447 93.18 0.998769987699877 2 coding 0 0 0 0 -1.1911859545394 0.00770494998572957 0.0289226682263913 0.749603131747081 CCCCCCGCGTGCCCGCGCCGCTGTGCGATGCAGTGTGGGGAATGGCTGGGGTTGGCTGAAGAGCGCACAGTGGAGTTTTAATGTCCGCCATGTTGGCCATGGCGTATTGAGGAGAGCGAGCGAGAGAGGAGCGGAGCGTCTCGGCCTCCCACCTCCAGGCGGCTCTGAGTGCCCGGACGGCGGGCTCCGCGCTCCGCCCCTCCAGTCCCCGGCAGCGGTGGGCGAGTGGGGACCGAACCCCCGGTTCTCCATGATCCCGCTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATCTGCTGCGCCTGAGATGAGTAAACTGTCGTTTCGGGCGCGGGCGCTAGACGCCTCGAAGCCGCTGCCGGTTTTCCGCTGTGAGGATCTGCCCGACCTGCACGAATACGCCTCGATAAACCGGGCCGTGCCGCAGATGCCCACCGGAATGGAGAAGGAAGAGGAGTCGGAACACCATCTTCAGCGGGCTATTTCAGCACAGCAGGTGTATGGCGAGAAGAGGGATAACATGGTTATACCAGTCCCAGAAGCAGAAAGTAACATCGCTTACTATGAGTCTATATATCCTGGGGAATTCAAGATGCCAAAGCAGCTCATTCACATACAGCCTTTTAGTTTGGATGCTGAGCAGCCCGATTATGATTTGGATTCTGAAGATGAAGTATTTGTGAATAAACTGAAGAAGAAAATGGACATCTGCCCATTGCAGTTTGAGGAGATGATTGACCGTCTAGAAAAAGGCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCAAACTACTGCTAAAAGAAGACGATGAATTAATTAGAGAAGTTTATGAGTACTGGATTAAAAAGAGAAAAAACTGTCGAGGTCCGTCTCTTATCCCATCAGTAAAACAAGAGAAGCGAGATGGTTCGAGCACAAATGATCCTTACGTGGCTTTTAGAAGACGTACTGAAAAAATGCAGACGCGGAAAAATCGCAAAAATGATGAAGCCTCTTATGAAAAAATGCTTAAGCTGCGTCGAGACCTAAGCCGGGCTGTTACTATTCTAGAGATGATAAAAAGAAGAGAAAAGAGTAAAAGAGAGCTATTGCACTTAACACTGGAAATTATGGAAAAGAGGTATAATTTGGGTGACTACAGTGGGGAGATCATGTCTGAGGTCATGGCTCAGAGGCAGCCAGTGAAGCCCACATACACCATCCCCCTCATCCCCATCGCCAACAGCAGTCAGTTCAAACACCAGGAGGCGATGGACGTGAAGGAATTTAAAGTTAATAAGCAAGATAAGGCCGATCTTATCCGACCTAAACGTAAATATGAAAAGAAGCCCAAAGTCTTACCTTCGTCTGCTGCTGCTGCTCCTCAACAGGCCAGCCCCACCACGCTGCCGGTCTTCAACGCTAAAGACCTGAACCAGTATGACTTCCCCAGCTCAGATGAAGAGCCTCTCTCCCAGGTTCTGTCTGGCTCTTCAGAAGCTGAGGAAGAGAATGATCCCGATGGCCCTTTTGCTTTCCGAAGGAAGGCAGGCTGTCAGTACTACGCTCCTCACTTAGACCAAACTGGCAACTGGCCTTGGACTAGTCCTAGCGACGGAGGAATAGGGGATGTGCGATACCGATACTGCCTGACCACCCTGACTGTGCCCCAGCGGTGCATCGGATTTGCACGAAGACGGGTTGGGCGCGGTGGAAGGGTCTTACTGGACAGAGCGCACTCAGACTACGACAGCGTGTTTCGCCATCTGGATCTGGACATGCTTTCCTCACCACAACATTCTCCAGTCAATCAGTCTGCCAATACCTCAGAAACAAATACCTCGGACAAATCTTTCTCTAAAGACCTCAGTCAGATACTCGTCAATATCAAATCATGTAGATGGCGGCATTTTAGGCCTCGGACACCATCCCTACATGACAGTGACAATGATGAGCTCTCCTGTCGAAAACTGTATAGGAGTATAAATCGAACAGGCACAGCACAACCCGGGACCCAGACATGCAGTACCTCTACGCAAAGCAAAAGCAGCAGTGGTTCAGCACACTTTGCATTTACAGCCGAACAATACCAGCAACATCAACAGCAGCTGGCACTCATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAGCAAGCAACTAGTAATTCCTCCACCACCGTGCCACAGGGTTTTGTGTCCAAGACTTTGGATTCTGCTAGTGCTCAATTTGCTGCTTCTGCTTTGGTGACATCGGAACAACTGATGGGATTCAAGATGAAGGAGGATGTGGTGCTTGGAATTGGGGTGAACGGCGTCCTTCCAGCCTCAGGAGTATACAAGGGCTTACACCTCAGTAGTACTACACCCACAGCACTTGTCCACACGAGTCCGTCGACGGCAGGGCCGGCTTTGCTGCAGCCTGCAAGCGTGACCCAGACTGCGGGTTCCCACAGTGCGCCGGGTCACCCGGCGACCGCTGCCAACTCCGCCACAACTCAGGTTCTGATTGGGAACAACATTCGATTGACTGTACCTTCATCAGTTGCCACTGTAAACTCTATCACCCCCATAAATGCACGACACATACCTAGGACTTTAAGTGCTGTCCCATCGTCTGCCTTAAAGCTGGCTGCTGCAGCGAACTGTCAAGTTTCCAAGGTCCCGTCGTCGTCCTCCGTGGATGCCGCTCCACGGGAAAATCACGACTCAGAAAAGCCAGCACTAAACAACATAGCAGACAACACAGTGGCGATGGAGGTGACGTAGCTCCTCAGGAGCGGAGCCGCAGCCTGGGGACTCGACTAGGTGCTATGCATCAGTAGCGTTTTGAATGCAAGGGATGGTGGAATGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTCGACAGCAGTGCTCATCTCTCATGCTTCAACTTTTCTTTTCTTACTGTTAATAGGAAAAAAAATCAACATCTGTAAATTAAGAATACAGCAATTATCTGTACAGTACTGCATATTTGTAATACCCTTGTATATACGTTACTTGAATACAGAAATGTTCATTTGTGATGCTTTGCACTTGGGGGCGGGGGGGTGGGAGGGAAATAAATTGCAACAAAGAGTGTGAGATGTGAGATTGTATCGAGATGAAGTGTCATCACATCATGTGCATGGTGCGGAACCTGCTGTTTTATCTATTTATTGTGCCGTGTTTACAGTTTTTTGTACACTGTACCTTCATTGGTTCCTGTGCTGTAGTAAATGTGTTAGGTAGCCGTGGACTCCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCCTGAGTTTTCTGTGTATCATGTGAAAAAAAAAAAAAAATGGTGACATACATACAGAATTTTACAAAAAAAAAAAAGGCATCAGTTTTAAAAAAAAAAAAAAAATGGGGAATGTACTGTTCAATGGGGATCTTCCTGGTCTACTCTCATTAGGACAAGTAACAAGCTAAAAATGAAGTCTCTTGAATCCTCCCCCTCCCCGCCTGCCCGCAAAGCTGCGGGGGTTCTGGTACTTAAAGCACTAATGTTATGTTGCTGCTCTGCACACGGCCCAGTAGTCCCATTTCCTTCCACACCAAAAAAGTGTTAAATCAAGTATGCAAACGGAGTCCTTACAACTGGAGTTTATGTTGTCTTGCCCTTTTTTTAGCACAAGAAGAAAAAAAATGTACTTTTTTATTGTCGAATTGTTGAAAAGACTTCATTCTTTACTTGTTCTTACAAAAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCAGCCAGCTTTTTTCCTTTTAAGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGAAGAGAATGGTACTTACCAGACTACTACTAGTGCTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACGTTATCCTTAAGGTTTTTAATCCCACCTGGAAAAAGTTGTGATAGAATTCTCACAAAATAAACCCAGGGCATTACATGTTGACAAACTAATGT EMBV3_02421 AGTGACCTTTGTCTCGACCATCTGTGCCTTAGCACCGGAGACTTTATATCCCCTTTCTGC Gene BVV0102_210183 + 1 EMBV3_04973 GK000007.2:60998969-61042754 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179596 TCONS_00102424 TCONS_00013240 TCONS_00243948 TCONS_00098275 TCONS_00098385 TCONS_00154811 TCONS_00099834 TCONS_00252294 TCONS_00169479 TCONS_00185628 TCONS_00105301 TCONS_00174545 TCONS_00025106 TCONS_00025108 TCONS_00230483 TCONS_00252175 TCONS_00172905 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00056222 TCONS_00207060 TCONS_00132257 TCONS_00240487 TCONS_00013239 TCONS_00169645 TCONS_00174540 TCONS_00174543 TCONS_00066485 TCONS_00039773 TCONS_00221594 TCONS_00161883 TCONS_00102423 TCONS_00174544 TCONS_00110376 TCONS_00140494 TCONS_00169477 TCONS_00171161 TCONS_00013237 TCONS_00088693 TCONS_00152796 TCONS_00137852 TCONS_00008712 TCONS_00226267 TCONS_00029929 TCONS_00243949 TCONS_00000314 TCONS_00248788 TCONS_00222044 TCONS_00135546 TCONS_00169478 TCONS_00252807 TCONS_00226268 TCONS_00154809 TCONS_00164253 TCONS_00094939 TCONS_00107398 TCONS_00117782 TCONS_00171162 TCONS_00154810 TCONS_00013238 TCONS_00154253 TCONS_00174546 TCONS_00202430 TCONS_00130398 TCONS_00187310 TCONS_00154812 48 XLOC_109368 XLOC_061863 XLOC_008038 XLOC_150314 XLOC_058521 XLOC_058631 XLOC_094549 XLOC_060077 XLOC_155235 XLOC_103372 XLOC_111681 XLOC_062534 XLOC_104638 XLOC_014669 XLOC_139973 XLOC_155116 XLOC_104243 XLOC_123974 XLOC_034025 XLOC_125579 XLOC_080738 XLOC_147151 XLOC_103408 XLOC_041198 XLOC_023590 XLOC_134908 XLOC_098768 XLOC_066280 XLOC_085141 XLOC_103753 XLOC_053479 XLOC_092561 XLOC_084061 XLOC_004269 XLOC_137960 XLOC_016184 XLOC_000088 XLOC_151731 XLOC_135353 XLOC_081769 XLOC_155748 XLOC_100173 XLOC_057600 XLOC_063308 XLOC_071948 XLOC_094013 XLOC_079107 XLOC_113358 Coding TCONS_00179596 XLOC_109368 Coding Coding - 3:99968921-99976242 - TSS134355 7321 2 TCONS_00179596_16 405 0.995082638983745 1 0 2.2899730733807e-05 2.87794733106343e-05 1.46660483268652e-06 6.61670287463767e-07 1.53646147036544e-06 6.28636240086872e-07 5.72528955562941e-06 1.21959670911563e-05 5.74881503638329e-06 0.000780002652451121 0.000524875399509416 0.000765542978596544 0.000139250951259028 0.000374871407518322 4.26007064693583e-05 0.00240846066750101 0.00195592431671475 0.00489058798563395 1.09503770484616e-05 4.87551939026511e-06 1.22570456212253e-06 0.0026724491859505 0.0033515583835469 0.00270820785064512 1.27136386568317e-06 4.52394845141639e-06 5.25248538403041e-06 0.00182989328022288 0.0018967866127545 0.0033944148952754 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2479 90.46 0.246414424258981 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 6e-08 66.2 69.48 0.0208987843190821 TCONS_00179596_12 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 2e-25 110 28.41 0.723287671232877 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACACATAAAAGGAAGAGCCAAAGCGCTCTCATGGACTCTCTCTCCTGCGTTCATGCGCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCTTAAGAGCTGTAGCATGGTTCCAAGACCCAAGAGCTGTGATGCGCTGAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACATACACTCGTGTGACATCTATGGTGCCGTGACTCGGGTTTAACCTGGCTGAAACAACCTTTGCGCAGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGCAAAACTCCCGCACTAGAAGTGGAAAGCGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACTGGGACAGTGAAAATAGAACTCAGCAGAAAGCTCACGTGGCCCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGTAAGAGGTCCTTGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCATTTCTTGTTTCCTCAAACCTCCCACAAACAGGCAGGCAGCAGGGGAACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGGTGGGGGTTCTTCTGTCCTTTATCCTGTGCCAAGGATCAGACCAATAAAATTATGAGGACCGGTCAGATATTTAGCAAATCTTCCAGTGGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCTGGCTAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAAATTTGTTAGGATCCAGAGAGAAGCCACCCTTCAGGGTGTGAACTGTTGGCAAGGTCAAGGGCTGGGGCCATGGAATTAGGCCGGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATAAGTGAGAGGACCATCCCAGCCATTGGGGAACCACCCACTCATCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTAGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACACTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCTCTTCCCTCCTGTTTCATGCTCTTTTCCTGATCCCCATCCAGACCCACAAGCCTGCCTCTACAATCTTCTGGAGAGACAACCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGGATGCCCAAACTCCAGTCCGGGGGGGTCCCAGGAGGTCATCACACCTTGACCTGCCTAGAGATCAGTCTTCGAAAGGTTGTCACACCTTAACCTGTTGGGGATCCTCTAGTCCGAGGGGTCCCATGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGCCATCACGCCTCGACCTGCCCGGGGATTTGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTACACCCTGACCCAGGGACACCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAAAAGATTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAACCTATTACTCGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCATTGCCTTTCTGGAGAGGTTAAAAGAGGCACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGATAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGACAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAAAAAGAGACAAGGCATGCTCAGATGCTGGCCGCCCTCCAGAAAAGCCCTATGGCAAACCCAGAGTCCTTGAAGGACAAGGCACAAGACAAATGCCTAATCTATAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGCAGCACTCTGCCCTGGGGACCCAAGAGCCTCAAGGTCAAGAGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGTGGCCTGCTCCAGCCAGCCCGCCAGTCACAGATAACCATCACGGGGCTGGAGCCAAGAGTGCACCTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTCCAGGAAAAGCAACTACTAAAAGATTGACCTGAGCACTTCTTTGTTGCTGGGATGGACAAATTTTCCCATCAGTTTCTGGTGGTCCCTGAGTGTCCTACTCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAATCCATTACACCTTCAATAGAGAGGGGCCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGCCCACCAAGCTGAACCAGTCATCATTATCCTCCGAGACCCTACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGGCTCAGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGTTTGTGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGAAAACAGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCTATCCCACAGTACCCAATCCCTACGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACTACTGGCTAAAGAATCCCAATATCGTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACACCAACAGATGACTTGGACGGTATTACTTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGAAAGGCCCTTAGCCAGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGTACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCAAAAACAATTGCGAGCTTTCCTGGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGATGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGTCTGTAGCTTACTTATTCAAGAGGCTCGATCCAACTTCCCAAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATTGGAGAGGCCATTTATGGATGTCTGATCAAAGAATTCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCAGGTATGCAGTAGTCTCCAATTTTGAGACCACAGAGGCTAGGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAACTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATATCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCAACTCTTGGAGGCAGTCCATCTGCCCACTGAGATTTTCAGTCTCCCACTGCAAAAGACACCAAAAAGGGAGCAGGGAAGTGACACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTAAGAGACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATATCGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCTTCCAAATATTACTAGAAAGGTCCTTCAGAGGAACAGGCGTCCAAACAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACATGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGACATATACATTCACAGGATGGATTGAAGGCTTTCCCACCCAGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCTAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGTATCGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAAGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGCATTGCCTCTGAGGAACAGGTTGGTCTTAGTCCTTATGATATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACACTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAGCCCACATGGAAGGGCCCCTACCCTGTAATACCTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGACACCTATTCAGAACTACCAGTGAGTGCCTTCTAATGAACACCCCCAAAATCTGGTTTCTGGGTATAAAATTTCTCAGGATAACCCTAAAGAGCCAACACAGCTTGACAGATACTGTACTCCAAAACAGAGAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCCATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATACAAAACTACAACTGACCACGGAAAATATCACACACCCTTGGACACTGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAAGGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGAAAGTAGCCAGAAAGACCTCGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATTTCTTGAGGGGGGAATATTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCAAGGACCAGAGTGAAGACTTCAGGTAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATTAAAAGGAAGAGCCAAAGTGCTTTCTCATGGACTCTCTCTCCTGCGTGTGTGCGCTCTTCCTCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATACAGCTGTAACACTGATTTACTTAAGAGCTGTAGCATGGTTTGTCCAAGACCCAAGAGCTGTGACGTGCCAAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGTAGGAAAGTAGGATACATGTTTTGAGTAAAAAAGGATTTTTATGCATGGCTGGGCTGAGATTAGGTTAAACTTATTCAGGTAAATGGATTTTGTTATTAAAAGTAGACTGGTGCAGGACTAGATTTGGTTCCTCTATTCTAAGAGAACATGTTTACTTAGAATGCTGCTTTTGATAAGATTGTATGAACTTGCCTTTAAGTGATCTGTATTTGTTTTTAAATAGTCACAGTGACCTATGATTCTATCTGACCAAATATTTTTAAAACTTTTTGATATTTTTTATGCACTTCCTATCAAATTCTAATTAAAGTTCTTTTGACTTCAGCTAGCTTGGAGATGCTTCAGAGGGCCCTTCAGAAAAAAATTTAATATAATTTAAAACTACATATATTCATATTAAACTGGCTAGAATTGGTTGATATGTTAAATTACACAGAAGTCAGTGAATGATCAGCCTCCTCAGATTATATGTTATGAATAAATTTTATTAATACAGACATTCTAGAAACTA TCONS_00174208 . 5' 11514 TCONS_00174208 . 5' 11514 EMBV3_07117 AAGCTGGATCCCTGTCACCCAACAGTCAAAAACTGGAGAAATTTTGCAAGCAAGTGGGGC Gene GeneID:518089|LOC518089:XM_002698812:44_cdna Constitutive 0 NULL GeneID:518089 28 GENE LOC518089 NULL similar to EDAR-associated death domain EMBV3_38798 TCCTGCTCTTGACAGCCTCAGTCAGGCCATAGCTTTCCAGCAAGCCAAAATTGAAGAAGA Gene GeneID:504536|ZCRB1:NM_001025318:18_cdna Constitutive 1 NULL GeneID:504536 5 GENE ZCRB1 MADP-1 zinc finger CCHC-type and RNA binding motif 1 EMBV3_30529 CTATTCTCATAGCTCTCAGTGGACTTCAAGTGATTGTCTGCCTCATCAGAGTGGTCATTC Gene GeneID:507280|TM4SF18:NM_001034287:17_cdna Constitutive 2 NULL GeneID:507280 1 GENE TM4SF18 MGC126972 transmembrane 4 L six family member 18 EMBV3_02658 GCCTAAAGGCAACACTTTGACGGGGATGGGTTTCTCTTTCCGCTTAGACTTGGGCAGATT Gene BVT0102_336824 + 0 NULL GK000021.2:9959917-10793102 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39215 TGGACAAAGATGCTCCTTTGCGCTTTGCAGGTGAACGACGTCAACGAATATGCGCCCGTG Variant GeneID:514447|CLSTN1:XM_002694061:173_cdna 491^735 3 EMBV3_34471 GeneID:514447 16 GENE CLSTN1 NULL calsyntenin 1 EMBV3_14748 TGGAGTCTGGGCACGGAATCCCCAATATCGTTAGAAATCCTGTGTTCTGTCAACATTCTC Variant GeneID:541149|LOC541149:XM_002699663:13_cdna 183^390 1 EMBV3_38223 GeneID:541149 X GENE LOC541149 NULL similar to transmembrane protein 185A EMBV3_05285 GCTCTTGCAGTCACGGTTCCAGCCATTTCTAATTTTATTTGCTGTGGTTACCTGTCTCGG Gene BVV0102_218170 + 0 NULL GK000008.2:5758649-6410063 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18620 TGACCAGATTGGCTCAGAAATCATAGAAGAGCTGGGGGAGCAACGTGACCAGTTGGAACG Gene GeneID:780809|VTI1B:NM_001079647:232_cdna Constitutive 0 NULL GeneID:780809 10 GENE VTI1B MGC137210 vesicle transport through interaction with t-SNAREs homolog 1B (yeast) EMBV3_11989 GCAATCTGTTGTTTCTGCCAAAGGTAAATAAGTAAAAGATTTAGTCAGGAATCCCCTTTG Gene GeneID:282605|FAM13A1:NM_174692:150_cdna Constitutive 0 NULL GeneID:282605 6 GENE FAM13A1 PRECM1 family with sequence similarity 13, member A1 EMBV3_02110 ATATGGGCGAACTAAGAGGTCTGAGGCGCAATTACAGATGTACCACCTGCAGTGTCTCTC Gene GeneID:616397|ZMAT4:NM_001076943:103_cdna UTR3_Alt 3 NULL GeneID:616397 27 GENE ZMAT4 NULL zinc finger, matrin type 4 EMBV3_29474 AGCGATTATTTCGAGCAGAATGGTGGTGGAGCGCAATGGGCGGTGGATCCTTCTGTTAGT Gene GeneID:785883|LOC785883:XM_002685627:305_cdna Constitutive 0 NULL GeneID:785883 2 GENE LOC785883 NULL similar to ATP synthase subunit e, mitochondrial EMBV3_09771 GACACTCAGTGGCCCTTGACACCCATCTCCTGGCTTAAAATGTAATTAATCCCGTGAATA Gene GeneID:514889|IFNGR2:XM_002684587:102_cdna Constitutive 0 NULL GeneID:514889 1 GENE IFNGR2 NULL interferon gamma receptor 2 (interferon gamma transducer 1) EMBV3_18273 TAAAACTTGAACTCGGACCTCAGCACCACTTCCGGTCACAGCAGAAAGAGCCCACGCTCT Gene BVT0102_110483 - 1 EMBV3_00226 GK000021.2:70905042-70919233 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43560 TTCTGGTATATGGCTGAGTTTCTGATGGACAGAGGGCTGTACAGATGCTCCCTGGAGGAA Gene GeneID:533996|PHLDB1:XM_002693125:553_cdna Constitutive 1 NULL GeneID:533996 15 GENE PHLDB1 NULL pleckstrin homology-like domain, family B, member 1 EMBV3_16163 TGGCCCCCAGAACATATACAACCTTTACGAGCAAGTCAGCTACAACTGTTTCATCGCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34575 CATGGGGTCTGATCTCAGATACACTAAATACGGGGCGTAGGAACTAAAACCTGATGTATG Gene GeneID:510574|VPS26A:NM_001075455:299_cdna UTR3_Alt 2 NULL GeneID:510574 28 GENE VPS26A MGC139062 vacuolar protein sorting 26 homolog A (S. pombe) EMBV3_34259 AGCCCTGTAGCTTTTTACAGTCTCATAGTATGAAATTATACCCTGCATGCTGACCCTTGC Gene GeneID:523184|SOSTDC1:NM_001046265:32_cdna Constitutive 0 NULL GeneID:523184 4 GENE SOSTDC1 MGC137992 sclerostin domain containing 1 EMBV3_11058 CCTTTCCTCTCCATCTCCAGCGTCAGTGATTTAGTCTAGCACCTTGCCATCTCTCTCAGA Gene BVT0102_270533 - 1 EMBV3_01839 GK000005.2:56683672-56697176 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199519 1 XLOC_121172 NonCoding TCONS_00199519 XLOC_121172 NonCoding NonCoding - 5:56684181-56687484 - TSS149087 3303 3 TCONS_00199519_1 56 0.642143505903724 1 0 0.00081422646383997 0.000465458753522818 0.00064999359247944 0.000354850262507654 0.000570997048546016 0.000159738518780776 0.000595000574610322 0.000668830554521847 0.000435951720218177 1.24568367758572e-05 1.69800369507705e-05 3.46418075548373e-05 4.69093245099991e-05 1.70898877662548e-05 2.67367887926316e-05 0.000151928742186523 0.000120634140683835 0.000243084831234669 0.000388614995790201 0.000744617173594332 9.55842892638773e-05 0.000117574353189453 0.000149984482388462 2.03023130480974e-05 0.000259056967031944 0.000641870522489196 0.000367194933897369 8.86944749357344e-05 3.30695199965517e-05 0.000271215487933625 XM_595033.6 IPCEF1 PREDICTED: Bos taurus interaction protein for cytohesin exchange factors 1 (IPCEF1), mRNA. 3e-65 255 87.26 0.0629730547986679 0 noncoding 0 0 0 0 0.000191552849140908 0.998643690157563 0.000191552849140908 0.998643690157563 TTTAAAATTCAGAGAAGGAGGTAACTGCTGGGGAAGGTTCAAGCTTTCAAAACAGGGATTTTAAAAAAGTGAAAATGAAGCCAAGAAACTGGCAAGAGAAGAAATTTCATTCTCAGAAAGAAAACTCAAGGCCACCTCTGGTGCAACAGTCATCCTCTCAAACACTTCCACCACACACTCCCCTGGCTGACCTAAAGAGGTCAGTATCCACAGTAATACATCTCGTTGCTACTATGTACCCTTGATAGTGTGTGGAGAAAATGGTATTTCTGTGGTTTTCCTCCTCAAAACTCATAAAACTAAGATAAACATTTATTAATAGGTCTCTCAGTTGGGTCGGACTCTTTGCCACGCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATTTTCCAGACCCAGAGATGGAACCTGGGTCTCCTGCATTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCACTTTAAAAATTCAGATAAAGAGGTAAACTAGGGACTTCTCTTGTGGTCCAGTGGTTATGACTCTCCACTTCCACTGCCAAAGGTGTAGGTTCAGTCCCTGGTGGGGGAACCCATAAGATCCCACAAGCCATGTGTGGTACAGAGAAACAAAGAGGCAACCTACAAAATACCTGATCAATACTCCTCATAGTCATCACAAACAGGGCAACTCTGAGAAACTAACAGCCAAGAGGAGCCTAATAAAATATGGAAACCAAATGTAATATGGTATCATGGATGGGATCCTAAAATAGAAAAAAATTAGGTAAAAACTAAGGAAATCTGAGTGAATGATAGGCTTTAGTTAGTGTTATCAATGCTGGTTCATTAATGGTGGTAAACACACAGTACTAATGTTAAGATCATAACAGTAGAAACTGGATGGGGAGTACAGGACAACTCTGTACTATCTTCTCAATTTTTCTGTAAGTCTAAAACTTTTAAAAAATAATTTATACACCTACACCCCTCAACACACAAACACACTTCATTTTCTACCAGGTCCCAAATTCTCAGCATTCAGAACTTGCTCTTTGGTTTTGAACAAAGGCCAGAGAACAGGGCAACTAATTCCAGAGGATCATTTACTTTTTTTTTTTTTCAATCGCCCACCAGGGATTGAACCCAGATCTGGCAGTAAAAGCAATGAGTGCTAACCACTGGACCTCCAGAGAATTCCCACCACTGACTGTTAAAATATGTAAATGCAGTGTACAGTAATAAAACTGGTTGTCCATAAACACATGAAACCTTATCATCTAAATGAGTTCCGTCACTTCCAGGTACTCAAGAAGCTTTTAGCCTTGTTTTAATAATATGAACACTGCTCAAAACACTTTGAGAATCATCTTCAGAGTCTATAGCACACACTTCAATGAATATTCATTATCTGCAGGTGGATCTGATTTATGCAAATAGCCAAAAAAACTCAGGCCAACGCTGATGAGTAAATGGGGCAGGAAATCTGGATCATAAATGTGTTTCAGAATTTTTTTGGATTTTAAAATGTAATATGGTGCATATGCAATAAATAAGACAGCAATCTCAGTGGGGTCTGGGACAGTACCTCATAAACGAATGTTTCTGCAATGAGAGATGAATATTCACATTGGTATAAATGAAAGTGGCATAAATGAAACTATAAATAACCTTATGTATTAATAAGCTATTTCACTCTCCTCTTTCACTTTCAAGAGGCTCCTTAGTTCCTCTTTGATTTCTGCCATAAGGGTGGTATCATCTGCTTATCTGAGGTTATTGATATTTCTCCCTGTAATCTTGATTCCAGCTTGTGCCTCATTCAGTCCAGCATTTCACATGATGTACTCCACATGTAAATTAAATAAGCAAGATGACAATATACAGCCTTGATAAGCTAGGAGGTCCGCCACAAAGTAAGTTCAAGTCAGATTAGGTTTCGTAGTCAAAAGAGATATGAAAATTTTTGGTTTTCATAACTTTTTTTCATAACTTTCTTAACTTAGGTAAAAGACTGCAGATGGTGACTATCTGATGATGATGCTCCATTCTATCCAGTCACCCAAGCTAGAAGCCTGAGAGTTACTCTAAACTCTTCTCTTCCCCCAACCCTTTAGCCAGTCATCAAGTTCTATTCATATTACCCGATGATCTTTTTTTAGTTTTTTTTTTGAAAAATAATTACCTATTTATTTTTGACTTTTCACTATGCTGGGTCTTCACTGCTGTATGGACTTTTCTCCAGTTGCAGTGAACAGGAGATACGCTCTAGTTGCTGTGTGTAGGCTTCTTGCAGTGGCTTCTCTTGTAAAGCACGGCCTCTAGGCACGGGGGCTTCAGTAGTTGTGGCTCCTGGGCTCTTCAACACAGGCTCAATAGTTGCAGCACAAGGTTAGTTGCCCTGCAGCACGTGGATCAGTGATAGAACCCATGGTTCCTGCATTGGCAGGTGGATTCTCTACCTCTGAGCCACTAGGGAAGCCCTGATGACTATCTTTTAAATCTGTCCTTTCCTCTCCATCTCCAGCGTCAGTGATTTAGTCTAGCACCTTGCCATCTCTCTCAGAGCACTTTTGTTTCCTTCAAGTTGGCCTCTCTGCACTTTTAACTTCCATAAAACCTTTTCTCCATACCACTCCTAAATACAGATCTGACCATGTCACTCCCATGTTACAGTCTTTATGGTTCCATGGCATCTCCTGTGATACTTTATGGCCCGTAGTCCTAATATCACCTAAATACAGATGTATAGAAACAAATTTTGGGACTTTCCTGGTGGTCTAGTGGTTAAGAATCCACCTTGCAATACCGGGGATGCAGGTTTGATGCCTGGTTGAGGAACTAAGATCCTACATGCCACAGAGCAGCTTAGCCCATAAGCCACAACTAGAGAGTTCATGCCCCAGAATGAAAGATCCCCTATGATGCAATGAAGATCCCGAGTGCTGCAACCAAGACCCAACACAGCCAAATAAATAAAAACACAAACAAGGCCATCCTCTGTGCTCACAGAGCACCTCATATGCTTATCACTTAAATAAAAGAAACAAATTTTAACTACAACAGTGCCACTCAAAGTTTGTTGTTATTTTTGTTGTTCAGTCGCTCAGTCATATCCAACTCTTTGTGACCCCCATGAACTGCAGCACGCCAGGCTTCCCTGTCCTTCAGCATGTCCTGGAGCTTGTTCAAATTCATGACCATTGAGTCGGTGATGCCATCCAACCATCTTGTCCAAAGTTTGTTACCACTCTGCAATGAAACA TCONS_00191949 TCONS_00191950 . 5' 395 TCONS_00191949 TCONS_00191950 . 5' 395 EMBV3_38921 GCCCCACTGGCTATTCGGGACCATGGAGCGGGAACATCTTACTGCTCTCAGAGCCTAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40562 AATTGACGGGACTTTACTGCGACTACAAGTTATGATGTGAGTCATCTGCACTTCACTCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35613 AGATAAACAGAAGACTAAAGAGACACGCTGCACTGGACATCTGTTGGCTCTGCCTGCCGG Gene BVV0101_003863 - 1 EMBV3_36199 GK000005.2:96154864-96408803 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20667 AGTTAGCAGTGTTTGGGAATGCAAGTACCTCAAAGCTGAAGCATCGTATCTTCTCACTGC Gene BVT0102_002755 + 1 EMBV3_08743 GK000019.2:10812767-10825783 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098704 1 XLOC_058948 NonCoding TCONS_00098704 XLOC_058948 NonCoding NonCoding - 19:10823914-10824900 - TSS73080 986 2 TCONS_00098704_2 39 1 0 0 0 0 0 0 0 5.91451291363929e-06 0 8.00217101132083e-06 1.25187406815927e-05 2.32168949851142e-06 0 0 0.000376891775658442 0.00014429998920538 0.000214292653307428 3.36760944736615e-05 2.54471538680663e-05 0 0 9.23646912475749e-06 0 0 0.000595094805367347 0 2.14364816352766e-05 0 9.74156021607539e-05 0.000123088132630302 1.82927915941197e-05 0 noncoding 0 0 0 0 0.0929532195503553 0.542172453611215 -0.00378012986923931 0.939102440288119 GGTCATTTCAAATGCTGCAGAGTACAGAACATCTTCAAGTATTTAGCTTAACAAAACATAATGAAATTTTGCCAAGCATAAATATTCACTCTGATGACATGGTGGTGGGGCTTTTCTTTGCAGAATAGTCTATCTGCTATTTTAACTGCCAGATTCTTCTCTCATTCTCAGTATGTGAGACATACTTTGGGGAAAACATTAAAAGCAATTTAAATGATTAAGCAAATTTCTCTAGGTAAAACTGCTTGACACACAAAATTACTGTCTCCCTAATAGGGGTTTTATGTTTAACTGAAAAGGGCACTAAAAATAATTAATGTGTACTTGAATAGCTCAAGATCTTTCTGGAAAAACCATTACATCTCTTTTAAAACGAAAGGCACAGAACGAAAATTCTTTTATCCTTTATTGTATTTGTGCTGTTATGAAGCATCCTTATAGCTTATATTTAGCAACAAAGTACTGGGAAGATTATTAACTGATACTGAATACCGTAGACACCTTAAAGCAGTGAGAAGATACGATGCTTCAGCTTTGAGGTACTTGCATTCCCAAACACTGCTAACTTACACTGTTGAGGTGGTCCCACTGAAACACACCGCTAATAGTTAATCTTCTCCAAGAGCGAATCTTAGTCACACGGAGGAAAAACCCACCTAAATCTTTGAGGCTCATTATTTGACATGGCTGAAAAAAAAGTCTTCCTGCTACAATTTCAGTCCTATTCTTGAGCGCATTTAGGACACTCAAAATCTCCAGCAAATTACTAGGCTACACTCATAAACACGTCTGCCAAAATGTCCGCAGAAACGTTAAGAAAGGCCATCACAAGGTCTATTTGAGATACCTCATCAATGGCCTTCACTGCCCTTTGAGTCAATTGTTTAACATCCGAAGAGACTATTAGCTCTGCTAGAATCCAAGCGTCAGCTTCTCCAACCGTCAGAAGGGCAGAGAGGATTTTAAGCCCCATTCCAATGCCCCCT TCONS_00092190 . 5' 409 TCONS_00092190 . 5' 409 EMBV3_36737 GACAGAGCAACCGGAAAGTTGTAGATTTGGTCTCCTCAATGCTGGTGTGAAAATCAGTCC Gene BVT0102_008230 + 1 EMBV3_43381 GK000029.2:5511524-5536299 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164433 TCONS_00164426 TCONS_00164427 TCONS_00164432 1 XLOC_100218 Coding TCONS_00164427 XLOC_100218 Coding Coding LOC100139381 29:5331659-5637035 o TSS123032 787 1 TCONS_00164427_1 82 5 0.997439214081048 0 0 0 5.81704960024972e-05 1.67290587919146e-05 0.000168554399603082 0.000264626084979771 0.00091696747623561 0.00163318017800277 0.00148507707039169 0.000872395170587822 0.000475976291030703 0.00449590889395761 0.013782240372611 0.00798664923880054 0 0 0.00022002803674561 0 0 0 2.5296884856066e-05 0.000509600229533219 5.02407973092092e-05 0 0 0 0.000124425859129935 0.000197066755521806 0.000171152875937156 XM_001787480.2 LOC100139585 PREDICTED: Bos taurus putative upstream-binding factor 1-like protein 3/5-like (LOC100139585), mRNA. 7e-135 484 88.28 0.485387547649301 NM_001076683.1 UBTF Homo sapiens upstream binding transcription factor, RNA polymerase I (UBTF), transcript variant 2, mRNA. 5e-48 196 76.43 0.332909783989835 TCONS_00164427_1 sp|P25976|UBF1_MOUSE UBF1_MOUSE Nucleolar transcription factor 1; 3e-31 117 65.43 0.975609756097561 0 coding TATTTCAGATGCACTGTTTCTTCTGTTCAGAGGTGTTCTGAGTTGGCTGGACCATGGACAGCTCCGAAAGTTACAGCTGCTGACCCATCCAGAGAACACAGAACTCCTGACTGGATGGGACTGATTTTCACACCAGCATTGAGGAGACCAAATCTACAACTTTCTGAGGTGTTCTGAGTTGGCTGGACCATGGACAGCTCCGAAAGTTACAGCTGCTGACCCATCCAGAGAACACAGAACTCCTGACTGGATGGGACTGATTTTCACACCAGCATTGAGGAGACCAAATCTACAACTTTCTGGTTGCTCTGTCAGAGGTGGTCAGAAGACTCTTCTTGTGTGAGTGCAGGAGACACGTGCAGAGAAGGGCTTCCCCTGCCAGTGCCTGAAGTACCTGCGCCTCCTCCACAGAAACAGAGGATCGCACACACTGCAGGACTTCAGAAATAACTCACCTGCTGAATCTTGAGAGTGAAGAAACAAAAATTCTGCTGAGGTGTCTGAACTGCTGGGATCACATAAGTGTCCCAAAGACCTAGAAATGGCGATGCCTAAACGCCAAGATGACTGGTCCAAGGAAGACATTGTACAGTTACTGGAAAGTATGGGGAAAAGCATTCCATCCAGTGACGGGCACACGTTCAAAACAACCCAGTCAGTGATGGACTGGGAAAAAGTAGCTTTTAAAGATTTTTCTGGGGAAATGTGCAAACTCAAATGGTTAGAGGTTTCCCATAAGGTGAGAAAGTTCCACACGCTGAAAGAATTAGTCCTGGAAGCTAAGGAN TCONS_00162934 r 5' 25115 TCONS_00164434 s 5' 130 EMBV3_13731 GCTGCTCGCGGAGGTGCTTCCCTCGCTCGAGGCTTGGAGATTCCGGAAATCTGCTGGCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31519 ACCCCACAGCAGATATCTTAGGAACCTACAACCATAGGAAGAGAGGGTAGATACAGGCAG Gene BVT0102_185196 + 0 NULL GK000002.2:85792739-85799096 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105634 TCONS_00105636 TCONS_00105633 TCONS_00105635 1 XLOC_062620 Coding TCONS_00105636 XLOC_062620 Coding Coding C2H2orf66 2:85796560-85800934 j TSS77901 1558 4 TCONS_00105636_3 67 0.127727856225931 6 0.645094900525955 0.0132437178377495 0.0108199345219143 0.00823348012987968 0.00338062619179565 0.00677055367420342 0.000700949647357914 0.00203613078978823 0.00145455198797203 0.00438740235231028 0.000200766304345891 2.30612321452757e-06 0.000368562835680042 0.000434709727432353 0.000675741658708849 0.000784136340345981 4.41147685668971e-10 0 0 0.00566328039012256 0.00819053164744165 0.00228910720971934 0 0 1.35359578042362e-11 0.00571657220290942 0.00917477071024592 0.0104906285299598 1.21053607154882e-08 5.67037582584988e-11 2.41590731084396e-09 XM_002703679.2 C2H2orf66 PREDICTED: Bos taurus chromosome 2 open reading frame, human C2orf66 (C2H2orf66), partial mRNA. 5e-83 313 100.00 0.110397946084724 NM_213608.2 C2orf66 Homo sapiens chromosome 2 open reading frame 66 (C2orf66), mRNA. 1e-71 275 68.69 0.424261874197689 TCONS_00105636_3 sp|Q6UXQ4|CB066_HUMAN CB066_HUMAN Uncharacterized protein C2orf66; 1e-16 70.9 46.43 0.761194029850746 0 noncoding 1 1 1 1 0.346275136600457 0.0320239296623445 -0.1689709417361 0.040918568926189 CAGTGACTCCCACCTGCAACTGATCTGCTGGTTATAAGTAGCCATGAATCGCCTTGCAGATTGCAGGCAGTGTAGCCAACCAGGGCCAGGCAAAACCAAACTCCTGACTCCTTTAAGCTAATCAGCTGGTTCTGGGGGGACCTCATTAGCAAATGAATGTGGAAAAAAAGAAGACTACAAAATTCAGCTTCCTTCCACCATGCCCAAAGCATTCCTGCTGCTGGCTGGCGCCCTGGTGCTCCCTGGGCTTGTGCAAGGAGTCATGCTGAGAAATGAAGAAAAATGGAAGCCCCTCAACATTCCTAGAAACCGAGATCTGTTTTTTAGAACTCTTCAGGCATATTTTAAACGAAGAGATTATGAACAACAGAAAAACTCCCTCTCCAATTACGTCAAAGGCTGACTGTTTCCTCTGAGTGCAGAAGTCTGGTGGTTTTAAAACTACAGATGAAGCTTCTCACTAGAAAAATTCAGTCTTGATCATGGCTAAGTTTTTGTGTGTGTTTCCCTCTCCACTTTTATCAGTCTGTTATGATTTTATTCTGTATTTCCAGATTTACATGTAAATAGTTTGAGCTTTGGGACATATGTGACTTATGTGCATGGTTTTTTCCCCACTCAATAATCATAGATATCAATATAGCACTGCATATATTTGCAAGGGTTACAAAAACACCATAAAGTCAAAGGAAATTCCTTTCAGCTGTGTTCTATGTTTCTTTTTTATCATCAGTGTTTTTATTTGAAAGGGACATTGATCATTTTTACTTTAGTTAATTATCTGTAACAGGAATTTGGGTTTAAAATGTATCTTTTTCCTACAAAGAATATACATTTCTATTAAAAGACCCCACAGTCTTAGTTTCATGTCAAGAGAGAGTAAGTAATGAATATCCACAATTAAGTTGAAATGGAAGACAAAGAAACATGGGATTTTAGGAGTTGCTCAGGCCTCTGGGAGATGTTCTCTGCCATGATGTTCAGAGGTGGCTATATTGTGCTATAGCAGATATCCTGGTTTAGTCTCTTAAGTCGTGTCTGACTTGCAACCCCATGGACTGTAGCCTGCCAGGCTTCTTTGTCCATGCGATTCCCCAAGCAAGAGTACTGGAGTCGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCAAACCCAGATCTCCTAAATTGCAGGTAGATTCTTTACCAACTGAGCTACAAGGGAAACCCCACAGCAGATATCTTAGGAACCTACAACCATAGGAAGAGAGGGTAGATACAGGCAGATTTCCCTTCTTTCATAACCAGTGCTCTTCCTCCACCAGCCCTCCCCAACTCAGGCTGAATTGGTCTGATTCTCATATTCTTATTTGTAACAGCTACTTTTCTTTATGAAGGGCTGTATCATTTTCTCTGATTTCTGCAAAAACAAAAACCAAAACCATACATCGTGCCAGAAGCAAACATTGTAATCCTAATGACACTAGTCTGTACATTCCAAAGTAGTTTTATGTGGCTTTTTTGGTGGATGATTGAATATGAATAATAAAATATGCAAGAACAGGTTAT EMBV3_27242 GTCGTTTGCTTGCCTGTCTAGGTGAATTGCAGGCGAAAGCCTCAGAAAGTTAGAGAGGAG Gene GeneID:282126|YWHAH:NM_174492:44_cdna Constitutive 0 NULL GeneID:282126 17 GENE YWHAH NULL tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide EMBV3_34539 TTCTGTCCCTCACCTGGAAAGATCCCACATGTTGCAGAGCAACTAAGCCCATGTGTCACA Gene BVV0102_450195 + 1 EMBV3_00136 GK000019.2:40974703-40981689 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14754 AGCAATCCTCAGACACCTCACTCAGGACAGATGAGGAAACTGAGGCTTGGTGAAGTTACG Variant GeneID:512187|NUMB:NM_001101951:100_cdna 136^178 3 EMBV3_22259 GeneID:512187 10 GENE NUMB MGC159835 numb homolog (Drosophila) EMBV3_36841 GAAGGCGGTGGAATCAGTCGTCACTTCCCCGTGGCACAAGTCCTAAGTCCCGCTCCAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16613 GATTGAACCCATGCCCCGTGTAGTGGAAGCATAGTGTCTTAACCACTGGATCGCCAGGAA Gene BVT0102_320799 + 0 NULL GK000030.2:2328498-2410037 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246097 TCONS_00246099 1 XLOC_150903 Coding TCONS_00246097 XLOC_150903 NonCoding Coding - X:2322174-2335182 - TSS184593 231 0.350649350649351 3 0.982470977166141 0.000218084103873623 0 9.18758632301453e-05 0 0 0 0 0.00124340553981701 2.16687385821433e-29 0 0 0 1.02301676437442e-120 0 0 0 0 0 2.9918997125204e-36 0 0 0 0 0 3.36651526181671e-07 0.000182527722585284 6.06876973718656e-05 0 0 0 XM_005203874.1 TARS2 PREDICTED: Bos taurus threonyl-tRNA synthetase 2, mitochondrial (putative) (TARS2), transcript variant X2, mRNA. 9e-19 96.9 84.21 0.402597402597403 0 noncoding 0 0 0 0 -0.231817385097854 0.0762919286443061 0.000737484344766275 0.987575092652343 ATTAGTTCCCTGACCTGGGATTGAACCCATGCCCCGTGTAGTGGAAGCATAGTGTCTTAACCACTGGATCGCCAGGAAGTCCCATAAGCTTATTAATAGCTCTCATCTATTCAGCAATTCGTGTCTATCCCGGGTGTCTAGCATGGCTGTAGGCCTTCAGTGCTGATGAGGATGATGGATCCACCTATATACCTTGTGACCAGCACATGTGTGTGGAATCTTAGTTTCCTG TCONS_00243556 r 5' 87807 TCONS_00243556 r 5' 74821 EMBV3_38531 AATGAGCTGTCCACCCCCAGCATTTGTGGCCCAGCTTTTCCTGCAGAAGGTCAAAAGCAT Gene GeneID:538472|METTL13:NM_001099085:108_cdna Constitutive 0 NULL GeneID:538472 16 GENE METTL13 KIAA0859 MGC157180 methyltransferase like 13 EMBV3_28090 CTCTTAAGTGGCTACATGACTTCGGAATTTTTGCGTTGGAGGTATTCTGTCATCTGTTTC Gene BVT0101_047899 + 0 NULL GK000008.2:98726103-98843682 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226405 TCONS_00226401 TCONS_00226406 TCONS_00226407 TCONS_00226404 TCONS_00226408 1 XLOC_137991 Coding TCONS_00226407 XLOC_137991 Coding Coding RAD23B 8:98691137-98728262 j TSS169280 4597 1 TCONS_00226407_1 336 0.0696106156188819 10 0.876441116259024 0.00184566740846279 0.00168715256994567 0.00130434839049023 0.0014826862645239 0.00252719504479342 0.001118495078879 0.00312300673826865 0.00235322345308636 0.00173683906164283 0.000180806050091688 3.63995297054644e-22 3.5461510332241e-05 0.000125908401979857 0.000436414567563112 0.000337300654111958 0.00654954081671089 0.0157379231882691 1.91466808264936e-08 0.00171473310581818 0.00180308515605916 6.09307125927113e-11 0.0041363757199195 0.00561408910254723 0.00032627412673343 0.00189588999471687 0.00177402826188439 0.00108953915651516 0.000997467693690903 0.000726364614312645 0.000847040172169085 NM_001046310.1 RAD23B Bos taurus RAD23 homolog B (S. cerevisiae) (RAD23B), mRNA. 0.0 4347 99.96 0.52512508157494 NM_001244724.1 RAD23B Homo sapiens RAD23 homolog B (S. cerevisiae) (RAD23B), transcript 0.0 3663 89.90 0.59082010006526 TCONS_00226407_1 sp|Q29RK4|RD23B_BOVIN RD23B_BOVIN UV excision repair protein RAD23 homolog B; 0.0 673 100.00 0.99702380952381 2 coding 1 1 1 0 -0.227844847403184 0.734206184662401 -0.202251976180228 0.0629326350473617 TCTCCGTCCATGGGATTCTCAAGGTGAGAGCACTGAAAGAGAAGATTGAATCCGAAAAGGGTAAAGATGCCTTTCCTGTAGCAGGTCAAAAGTTAATTTATGCAGGCAAAATCCTCAATGATGATACTGCTCTAAAAGAATATAAAATTGATGAGAAAAACTTCGTGGTAGTTATGGTGACAAAACCTAAAGCAGTGACAACACCAGCACCAGCTACAACTCAGCAGTCAAATTCTGCCGCCACCACCACAGTCAGTTCCTCCACAGCGCCAGCTGTGACTCAGGCCCCAGCCCCTGCCCCCGCTTCGGCTCCCACTCCCACACCTGTGTCTGTCACTCCAGCACCGACGACAGCATCTTCTGAGCCTGCGCCTGCTAGTGCAGCGAAGCAGGAGAAGCCTGCGGAGCGGCCAGTGGAAACCCCAGTGGCCACCACCCCAACGTCAACTGACAGTACATCAGGTGATTCTTCTCGGTCAAACCTTTTTGAAGATGCAACAAGTGCACTTGTGACAGGTCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCTATGAACGAGAGCAAGTAATTGCAGCCCTGAGAGCCAGTTTCAACAACCCTGACAGAGCAGTGGAGTATCTCTTAATGGGAATTCCTGGAGATCGAGAAAGTCAGGCTGTGGTTGACCCCCCTCCAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGTGGCTGCAGCCGCAGCAACTACGACAGCAACAACTACAACAACAAGTTCTGGAGGACACCCTCTTGAATTTTTACGGAATCAGCCTCAGTTTCAACAGATGAGGCAAATTATTCAACAGAATCCTTCCCTGCTTCCAGCATTGCTACAACAGATAGGTCGAGAAAATCCTCAGTTACTTCAGCAAATTAGCCAACATCAGGAGCATTTTATTCAGATGTTAAATGAACCAGTTCAAGAAGCTGGTGGTCAAGGAGGAGGGGGAGGAGGTGGCAGTGGAGGAATCGCAGAAGCTGGAGGTGGTCATATGAACTACATTCAAGTAACGCCTCAGGAAAAAGAAGCTATAGAAAGGTTAAAGGCATTAGGATTTCCTGAAGGACTTGTGATACAAGCATATTTTGCTTGTGAGAAGAATGAGAACTTGGCTGCCAATTTTCTTCTACAGCAAAACTTTGATGAAGATTGAAAGGGACTTTTTTTTTAATCTCACACTTCACACCAGTGCATTACACTAACTTTGTTCACTGGATTGTCTGGGATGACTTGGGCTCATATCCACAATACTTGGTATAAGGTAGTAGATTGTTGGGGGTGGGGAGGGAGGGATCTAGGATATAGGGCAGGGATAAATACAGTGCATGTCTGCTTCAGTTAGCAGATGCCGCAAATCCACACAGTGTGTAAAATATTATACAACCAAAAATCAGCTTTTGCAGGTCTTTATTTCTTCTATAAAACAGTAGGTAACTTTTCCTAGGTTTCACTCTTTTTAGTGTACTAGATCCAGAAATTTAGTGTAATGCCCTGCTTTATATTTCTTTGACTTAACATTGGTTTCAGAAAGAATCTTTGCTACCTAGAATCTACAGTCCCTATTTTATGGCAACACTGGATAATGGCTTTGTGAAATTGGGAAAAAAAAAAATGGGAGTGACTGTAAACAGAAATGCCAAATTATTGATGGTTACTGTTGCTGCTTCAAATAAGTATAAAATTAATGTGTAAGAAAGCCCATTCTTTCATGATAATACTTGGGGTTGAAGGGGGGAGATGGGGGAACATTTTCTTAAGATGAAAATAATTAACTGCTATTTTAAATTTCTTGATCATTGAATGTGAGACCCTTCTAACATGATTTGCGAAGCTGTACAAGTATAGGCAGAGTTATTTTTCTGTTTACATTTTTTTTTGGTTTATTTTGGGGGTAAATTGGTAGCTGCCTAATTACTGTTTACTTCATTGTTATATTGCAGTAAAAAGTTATAAAAACCACGGTTGCATGTTTGCTTTTGATGTATCCCTTTGTGGAGTTAGCACTTTGGGGCCAATGAAGAAATGCAGCATTCACTCTCCCTGTCTTCCCCTTCCCTCAGCAGAAATGTGTTTGTCAGCAAGTCGTGAATTCCAACTGCTGCCTTTTTTAAAACCCACAAAATGCTGATTCAGTTCAAGATTAATGCAAATGTCTCAAAACTGGGTTTCTGATATTTGTAAATGTTTTTTCCTTATTAGATAAGAATGTATGACCATTAAAGTTGTTAGGATTATTTTGCTTTTGAAAAGAGAAGGTGGACAGAACTACAATCCAGCATCTTTTATTGCATTGGAAAGACTGGCAAAATCTTTTGGAAGGGTTGGGAGATGCAGCTGGAATAGTACTTTGGAAAATATACAATCAAGATATCTCATGGCATATTAAAAGAAAAATCTTAATAGCAATGTTGGCTTTTATTTGGATTTTTTTCATCTCAGCTTTTTTCTTTGGAATCTCCTTTGTTGGCATTGTTATTTGATCATGAAGAGGGGGCAGGTGTGTCTACTTGTTTTATTTTTTTCAGCTCTCTTCCTGAGTATTAAAAAGACTAAAGAAATAATTTTTTTTCTACCATCTTATACTGAGTTAAGAAGATGAATTTGCACAGATTTTATCCTACATAATCTCTTAATCCTTAGCACAGTTTGGTGATGACTTTTAAGCTTTTACATCATGCACTCATAACCTATCTCTTATGAAAATAAACAAAATTATGATTTTTTTTCCCATGTTAATCATGTAGTTTAATCTTCATGTGTTTATTCCATAAACACAACAAGACCTTTGGACTTTGTATTACCTGTATGTTTTATAATGGATTGTGCAAAAATGTCTCAGAATAAAATGAGGATTTGTAAATATGTTCATCTTTCGAGGTAGAGCAATGAGTTGGGAAGAGGGATGGCATTTCTGGTGAGATAATGGAGTATTCGTTTATTTTCACGATATTTTATCTGCTACTTAATTGCTTAGAGCATAGTGAAAACTAGAAAAGGAGAGAAAAAAACAACCAGCAGCCACCTCTTCTTTTCTCTGGAAAGTGACAGCAGGAGGTGTTCGATCACATGGAGCTTTTCTCCTTGGACAGCAAAACTACAAATAGTGGGATTAATAATCAGCAGAAGACAGCTCAGGCCACGTTTGGCCATTCTTTGCAGTGCTCTGTTTATCTGTGGAAAGAATCAGCCATTACACCATGAAAGAAATAGGCTTTATGTGGCCTTTTGCTGTTATCTTTTAATTTACAAACATTTTGGTAAATCTCTTAAGTGGCTACATGACTTCGGAATTTTTGCGTTGGAGGTATTCTGTCATCTGTTTCTTGAAATCTGTTGATTGTTTAGTTGCTCTGTGGAAGACCTGAAGAAGCTTAAGTTTATACTTGTTAAATTCTTACTGCCGTCTAGTCAAATATATTTTTACATTGTTTAAAAATACTGAAGTGTTCCACCATATGATTTTTTTTCTCCTGTACTCGATGGCTAGGATTCTAGAGAATTAATTATAAAATATTTTCAATATATCCAACATGGCATTTCTCATTTTTTAAAATGATTTTACCGTATAGAATCTTAGATTGGAAATGGACAGTGCCCCATCACTGATCCTTCTGCTTTCTTTGTTGGTGGTGAATTAGGGTGTGGAATGCCCAGCACTAGGTCGGTTTTATTGGGTCTCCTGTTTGTGTTCACAGTGAAAACATCAACACAGAGATGGGACACTTCCTAGAATGTATGTATCAAAGTTCATGGGGGCTTTAGAGATGTCAGGGAGTTCTCCCTTTTCCAAACCTCTTTTTTTTTTTTTTTTAAAACATCAGCCAGCCTAAGATAGCTAAGTACTCAAAAGCAAGCAGTTTACAGGAGTCCTTCCTGACCACATCTGTGTTCTGCTGAACTGTCTCCTGTGCGGCTCAGGTACAGTGTGTTCTTCCAGTTGACTTCCCACTGTCCTTTTTGTTCCACTTTGTTCTAAGCCAGGGGCCAGCAAACTGCAGTCTCATGAGCCAAATCTGGCTCACTGCCTGTTGTATGAGCCATGAGCTAAGAATGGCCTTTACAGTTTTCAGTGTTTTGTTTACAAAAAGGCGGAAAGATTCAAATTCCAGCGTCCATAAATAGTTTTGTTGGCACACAGCCATGCTCCTTTATTTACATATTATCTATAAGCAGCTAGTTTTGTGCTAAAGAGGTTTGCTGTTGAATAGTTGCCACAAAGACTGTGGCCAGCAAAACCTAAATACCTTCTGGCCCTTTACAGAAAGCTTTCCATCCATGTCTTAGATTGCACCCAGCCCTATCATATGTTAAATTATGACGCTTTTCCCCCTTTTATTTGTCAGAGTTCTGGGCCTCTTGAGGTCTTAACTTCAGTTTGCTTTGCTTGTGACCATCATGGGGTCTTTCAGAGGTGTGGTATCACCCCCACATATTCATTATCAAAGGGAGGAGCGCCTGGTGTGCTAGTCCGGCATGTATGTGATGTCTAAAATTATTCTTTGCTATTGCTATACTATTTCTTGTGCTTTAGTAAGATAACTAAATAAAGCACCAAGTGAATAAGAA EMBV3_21616 TGAGAGCTAGAAACCACCTGATTTTGCCAGAGCGATTAGAAAGTGAAAGTGGGCGCCTCC Gene GeneID:100336508|LOC100336508:XM_002698951:64_cdna Constitutive 0 NULL GeneID:100336508 28 GENE LOC100336508 NULL excision repair cross-complementing rodent repair deficiency, complementation group 6-like EMBV3_25270 CCACTTGCCCCTTCCATTTTCCCCACGTATTGATTTAGTCTCACTGCCTAGTCTTTGGAC Gene GeneID:539376|Mynn:NM_001035424:34_cdna UTR3_Alt 4 NULL GeneID:539376 1 GENE Mynn MGC127144 myoneurin EMBV3_28948 TGATGAAATGCTGAGCCTTTCTATAGCTTTCTAAGCTGAGAAGTAGACTGTGGCCCAGTG Gene GeneID:534252|TBC1D15:XM_002687169:108_cdna Constitutive 0 NULL GeneID:534252 5 GENE TBC1D15 NULL TBC1 domain family, member 15 EMBV3_37530 CGTGGAGTGTGAAGGGTGGAGATGCTGTGGCTGATTACCTCCTGCAAGATATGAAGTGGA Gene BVV0102_179435 + 0 NULL GK000025.2:37499272-37500101 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147226 TCONS_00147227 TCONS_00147228 TCONS_00147230 TCONS_00147229 1 XLOC_089318 Coding TCONS_00147226 XLOC_089318 Coding Coding CPSF4 25:37499585-37512137 j TSS109899 1948 2 TCONS_00147226_2 190 8 0.845430642976655 0.00510560624739541 0.00373824707157449 0.0017149855858572 0.00251486323819869 0.00192427620335068 0.000198720926784734 0.000801946558571873 0.00293459394370551 0.00163890287672318 0.000780436691330416 8.26051312361257e-05 0.000486845525257928 0.00028145365176509 0.000238131612604725 0.000399870420532032 0.00321794418365606 1.90949856079206e-07 0.00226663603775371 0.000390865684301724 0.000323331476373445 0.00104511928791205 0.00201261691854022 0.00188108149945003 0.00147501234352319 0.00089200481353045 0.000835442405693019 0.000768432041470736 0.000880162122403644 0.000468172037401979 0.000514639065304649 XM_005225004.1 CPSF4 PREDICTED: Bos taurus cleavage and polyadenylation specific factor 4, 30kDa (CPSF4), transcript variant X2, mRNA. 0.0 2677 99.80 0.764373716632444 XM_005250119.1 CPSF4 PREDICTED: Homo sapiens cleavage and polyadenylation specific factor 4, 30kDa (CPSF4), transcript variant X1, mRNA. 0.0 1187 77.68 0.757186858316222 TCONS_00147226_2 sp|O19137|CPSF4_BOVIN CPSF4_BOVIN Cleavage and polyadenylation specificity factor subunit 4; 4e-141 398 100.00 0.994736842105263 2 coding 0 0 0 0 -0.337295793812522 0.063165803272842 0.0333308516763381 0.646899414521797 AGTCAGGGGCTGCTGTCTGCGAATTCTTTTTGAAAGCTGCCTGTGGCAAAGGGGGCATGTGCCCGTTCCGCCACATCAGTGGTGAGAAGACGGTGGTGTGCAAACACTGGCTGCGGGGGCTGTGCAAGAAGGGGGACCAGTGCGAGTTCCTGCACGAGTACGACATGACCAAGATGCCCGAGTGCTACTTCTACTCCAAGTTCGGGGAGTGCAGCAACAAGGAGTGCCCCTTCCTGCACATCGACCCCGAGTCCAAGATCAAGGACTGCCCATGGTACGACCGCGGCTTCTGCAAGCACGGCCCCCTGTGCAGGCACCGGCACACGCGGAGGGTCATCTGTGTCAATTACCTCGTGGGATTCTGCCCGGAGGGGCCCTCGTGTAAATTCATGCACCCTCGATTTGAACTGCCGATGGGAACCACCGAGCAGCCCCCACTGCCGCAGCAGACGCAGCCACCCACGAAGAGAACTCCGCAGGTCATCGGGGTCATGCAGAGTCAAAACAGCAGCGCGGGCAGCCGAGGACCCCGGCCGCTGGAGCAGGTCACATGCTACAAGTGTGGTGAAAAAGGACACTATGCCAACAGATGTACCAAAGGGCACTTGGCCTTTCTCAGCGGACAGTGACAGCAGCTGGACCCAGCTCAGAGCAGCCTGGGGGGCCCCGTGCTGGGGGCCGCCCTGGGCCATTCCTGGGAGTGTGTGTTTAACTGTTTCACACCAGCGCTGGTGCGGCTCTGGCTGGAGCTGGTAGGCAGGCACGCTGGGGTTTATTCTTACGGGCTACGTCTTGTCAGTATCCCTATTTTGCTGTAATGTCTTTTTTAAAAGGGGGACACGTGTTCCAGTCTGGCCCCTTGGGTTGGCATCATGTTTGTCGAGCTATCAAAGCTGCACACCACCCTCAGGAGGGAGGAAGCTGTGGGAAAGGGCTTGTGCTTACAGCAGTTGTGTATGGAGGGCAGCCCTTCCCCTTGGGCCTCCTTAAACACTGGGGGCTGGTGGACCGTTTGAAGCTGCAGCTGGGTCACGCCTGCTTCCTCCCTGTCCTGCTGCATCAGAGGCTGTATCTGTTGGTGGGATTTGAACAAGGTGGCCCTTCAGGGCAAGCTCAAGTGTGCTTGCCACCTCAGCCGGGTCCTGCTCCCTGGTGGCCGTGGCTGAGGAAAGGTGCAGGGCCAAGGCTGTCACGTGTGATGGCCTTTTTCTTCTGGCCGTATCTGCCTGACGGTGTTTAAGGTATACCTTAAGCTGGAGCTGCCACCAGCCTTTCCACAGACACGCAGTTCACCTGTGCACCTACCTCCCATGCCATCAAGCATCTGTACTGTCACACACCTTGGGCCCAGAGGAGAGGCCTGTCTCTGAGCCTGGAAATGTGAAGCTGGCACCTGCAACCTGCAGGGCAAATGGGCCTATTTGAGTTTAATTACAGGAACCATTTTTATGAAGTTGATTAAAGCTTGTTTTGTAAGCTGTGTTTCATTACGTCAGGACTCCATGACAAGAAGGTTCTTGCTGCCGGCTGCATAAGCTTTGACGGTGCTCCCTTTTCCCCTTTTAGTGAAAGTAATCTCACGACAGGAAGTGACGCTGGGGCCTCGGGGTGGCATCCTGGAAGCCTAGTCATGGACACAGTTGCCTGGCAGGTGTCCGTCATCTCAGATGTCGGGAGACTGGTTCTTTCCACTTCATATCTTGCAGGAGGTAATCAGCCACAGCATCTCCACCCTTCACACTCCACGCGTGTGTATGCTCACTACACACCCCTTAGGAAGAAAGGTTCTGACCTTGATGCCACTTTACCTCTGGTGGAGTGTAAGGAAGAGGCTGCTGGACACAGCAGCCTGAGCTCCTGTCGGGACTTCTGCTTTCCCTTCCCACCGGTGTCATCCCGCTGACCTTCCTGCAAGTGAGGCTTACTCAGCAAGACCAGACGAGCCCAC EMBV3_34682 AAAGGGGGGCAGCGAGAAAGCCTGGGGAAGATGTTCTCAGTGCAACTGAGTCTTGGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08333 CAACAGGTGACTCGAACTCACACCTAGAATTTGTACAGCTCACGTACCTTTCCCGTAGGC Gene BVT0102_351363 + 0 NULL GK000003.2:20712081-20718767 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168998 TCONS_00169002 TCONS_00169003 TCONS_00169001 1 XLOC_103249 Coding TCONS_00169003 XLOC_103249 Coding Coding OTUD7B 3:20709189-20718511 j TSS126634 6009 1 TCONS_00169003_3 415 0.0637377267432185 4 0.355755820190967 0.00203647353767293 0.00172373437244632 0.0011423339042175 0.00114745671249066 0.00181991679471817 0.000562433612016983 0.0015840701493029 0.00155903629372654 0.0024110423369516 7.74073950163631e-05 0.000105984330879159 3.86785949264912e-05 7.49585933398447e-49 0.000725251965114646 0.000228655844751663 0.012307893940522 0.00140658112259661 0.00960380133458195 0.00203658156296602 0.00256828106027161 0.00137064043259943 0.00474929926538447 0.00272930333558112 0.00496223037842946 0.00266027058386495 0.00188696904716088 0.000838259475329678 0.000876683126018527 0.000247187068805046 3.50930220636614e-05 XM_005203897.1 OTUD7B PREDICTED: Bos taurus OTU domain containing 7B (OTUD7B), transcript 0.0 1.019e+04 100.00 0.939923448161092 XM_005245352.1 OTUD7B PREDICTED: Homo sapiens OTU domain containing 7B (OTUD7B), 0.0 2522 87.68 0.339324346813114 TCONS_00169003_3 sp|Q6GQQ9|OTU7B_HUMAN OTU7B_HUMAN OTU domain-containing protein 7B; 0.0 711 91.08 0.997590361445783 0 coding 0 0 0 0 0.00686338619323817 0.975827673794012 -0.0785984771925653 0.268942266450968 ACTGGAGCCAACTGAGAAGATTGGGTTAAAAAATAAGAAAAGAGTTTATGACTTTTTAATGTAATCCTATCCCTAGAGGTCAAATTGCATTTGCTGCATGGCTACATGAACGTGAAGTGGATCGCAGTGTCCTCTGATGCGCAGGCTCCACTGGCCCAGCCTGAGTCCCCGACAGCCTCAGCTGGAGATGAGCCCCGGTCCACTCCTGAGTCTGGGGAATCAGACAAGGAGTCAGTTGGCAGCAGCTCTGCCAGCAACGAGGGCAGCAAGCGGAAAGAGAAGTCAAAGCGAGATCGGGAAAAGGACAAGAAGAGAGCAGATTCTGTGGCTAACAAACTGGGCAGCTTTGGCAAAACCTTGGGCAGCAAGCTCAAGAAGAACATGGGAGGCCTGATGCACAGCAAGGGTTCTAAGCCTGGAGGGGTGGGGACAGGTTCGGGGGTAAGCGGTGGCACTGAGACCCTGGAGAAGAAGAAGAAAAACTCACTGAAGAGTTGGAAGGGTGGCAAGGAGGAGGCAGCTGGGGATGGGCCTGTATCTGAGAAGCCCACATCTGAGTCTGTTGGTAATGGAGGGAGCAGGTATAGCCAGGAGGTGTTGCAAAGCCTGAGCATTATGAGGATTGCAATGCAAGGGGAGGGGAAGTTTATTTTTGTTGGCACCCTGAAGATGGGTCACCGCCACCAGTATCAGGAGGAGATGATCCAGCGCTACCTCACTGATGCTGAGGAGAGATTCCTGGCAGAGCAGAAGCAGAAGGAGACAGAGAGGAAGATCATGAATGGAGGGGTAGGGAGTGGGCCTCCTCCAGCCAAAAAGCCAGAGCCAGATGGCGGGGAGGAGCTGCTGACTGCCCCTCCAGCAGAATCCAAGGCAGTGGCATTCTCTGCTGGCTACCCTGGTGGCTTTACTGTCCCTCGGCCTTCTGGGGGTGGAGTCCACTGCCAGGAACCCCGGAGGCAGTTGGCGGGGGGGCCGTGTGGGGGGGGCCTACCACCATATGCCACCTTCCCCAGACAGTGCCCTCCTGGGCGACCCTACCCCCACCAGGACAGCATCTCTTCTCTGGAGCCAGGCAGTCACTCCAAGGATGGAGCTCACAGGGGTGCACCGTTACCACCCCACTTCCGCGTGGCTGATTCCTATAGCAACGGCTACAGAGAGCCCCCTGAGCCAGATGGATGGGCTGGAGGTCCCCGGGGACTTCCCCCAACCCAGACCAAATGCAAACAACCGAACTGCAGCTTCTATGGACACCCTGAGACAAACAACTTCTGCTCCTGCTGTTACAGAGAAGAACTGAGGAGAAGGGAACGTGAACCGGGTGGGGAGCTGCTGGTGCACAGGTTCTGAACGGGAAACCTTGGAGGGCAAGGGGGCTAAACAAAGAAAGTTAAGCTCAATTAATTGGCTCATAAGACCCAGCTCCCATGTTGATGGGGCGAATGCAGTAATGTTGGTGTGAGCCTGGCTAGAAACTCTTAAGTGTGTATACTCTGAAGAGCTGCCAGGCTGGCAAGAGCAGGTCAGGGCTGGATGGTGCCTCGAGGCTATACTGGTCCTTTGCCGATCTTGACTTGATGGTACTGAGGAGGTACAAGGGGAGAAAGATGGTAATTGTGTGTCATAACCCCTTGGGTCCATCCCAGGCCTAAGGGAAAGTGTAAGGGAAGATTCGGGGTGTGGGGGTGGGTAGGTGGGCAGAAGTCTGGGGGAGGAACTGGCAAAGGAGGTTCTCAGTCAATAAAAGAAAAAACAGACCAAAGTTCTTTTAGGTTGGAAAAAAAGCACACGGTGGTGGAGTTGGGAGTGTGGAGGGAAATTGGGAAATTAGATTTGTTATTGACTTGAATTAAGGTAGATGTTTAGTGTTGGATAAATTTTTCCTTCTGAAGGATCTGGAAAGACAAGGCAGAAATGTGTGCTTCTCGGTGCTTATTAGGAGGGGGATGGCTTAAATGGGTTTAGTGAGATGACAAAGGCAAGAACTTAAAGGGGGAATCTTTTTCCTCTGAAGTTTGATTTCCTTCTAAACAGCCGTCTGTCATCCCTTCTAGTTCGAGAGGAGATTGCCGATTGCCCCCTATCTTTTCCTCATCCTTTTTGAGGACTGAGCTCAGCTAAGTTAAGAAGGTTGTGATTTTTTTTAAGACTTTAATTTTATTAAAAAAAAAAAAACAACAAAAAACACAAAAGAAGTTCCCTCTGGGGAAGGCAAGAGAATGATAAGAGCAGCTGTGTGTGTTGAATTTTTTCTAGGTGAATTGGTGCAGAGGTGATCTTTTTTTAACTACTAGCAATAACCACACATTTGAGTGCGCCTTGGGAGGGGGTGGGAGGAGGACAGACTTTTGGCCAGACTGTTTCAAACAAAACCAAAAACCTAAATAGAGCACTACCATCCTCTGCTGCTGCATATCTGTAGAAAGCAACTTATTTTTTGGATTTTTTTTTTTTTAAGAAAAGAAACAAAAAGACCCTAGCAAGCAAAAAAAACATTTTAAAAAATGAGTTTTTTCCCTCCTATTTAAGTCATTCTTTCTCCTTGCTCTCTACTTTTGGAGAATGAACTTAACATCCCGGCTTCTTTTGTTAAGCCATAGCTGACCTTAATCTGTGGTTAGTTTATTAAAATAATTAAAAAAATACTTTGTAAGAAGAGATATTTTTGATAATAGGACTGATGTTGAAACTTGGGGTAGGGATTAGGGGCAATTTATAAAGAGGTAGCTAGAGAAATATATATTTTAGTGAACTATAACCACAGATCACAGATTACTCCCAATGAGCTGATCTGTCATTGGCTCTCCCGCCTCTCCCCAAACCATCCTTTTCCCCAGAGGGTGGGAGTGTGTCTGTGGACACAGTAGTTGGGGGAGCTCCTTTGCATTTTGCACAAAGCACAAGTCTGGACAGCCTATGCTCTGGCCAGCACCATTTCTAAGAGCTTTAAACTGGAGGACCTATCCTGGGCCAATCTTCCCTTTTCTTTAAATTATTTCTTTCTGGGGGGAAAAAAAAATCAACTATGCAATTGTATACACTCCTGGGTGCATATGAAGAAGGGGAATAAGTGTACTTAATGTGTCTAGAGTGTTAATTGGGGCTATTTTTCTGTATTTGGATTTCTCTTTTGAGGTGTGTACTCTTAAACCATCCTGTGGAATGTAATCTTTACATTTGATCCAAGGCTGACATGGGCTGGGAGTGTGCGTTGGGGGGACTTGTGTTTGCCATATGTTGCTTCTGCCCAATCAGGAAAGTTGTCATCCCACCGCCCCCTTGATAACAAAGTCAGCCAAGACTGTCCTCTTCATTGGAACTGCTCACAATTTAGGAAGTTTCCTTTCTCAACAAACTCAAAAAGCCACTTATTTTCTAAATCTGATTGTTGATTTAATAATTTCCATGGCTATTAATTCTTAGGCTTTTATTTGGAAATGGATGTGTTAAGGAAGCAATGAGGTCAAAGGAGATAGGTTCCAAAGGAGGGTATGTTTGTATTTCCAGGCAGGACTGGGGCTGGTGTGAGAGGAGCATTCCCTTCAGGGTCAAAACTTAAGGAGATGCCAAAAGCTCACTAGTCAAGATAAATAGTGTTTTAATGCAGCATTTTTAAAAAATTAATGCAAAAAATCCATCATGGGCAAAATATCAAAATCTTTAAAACAGGATCCAGCAGGACTGGGGTTAGAGTGAGGGAAGAAAAGCTGAATTGAGCAAGGAGGAGTTGAATCTTGTCTTTATTTAAAATTTCGATACTTTATTCATTGTGGCTCTTTTTATATTAATTTTGATTTTCAGACTATATTGTGTTAAAATAGCATCTTGGTCACTGGCTTTTGAGGCATCCTTAAATTTTGTGCCCAAAGTGAGTGCCTTGCTCACCTCACCCCGTGTCTGGGCTTAGAACACTGGTGGGACCACCACCATACGAACTTCTGTCGCCTGACATGCACCCAAACAACAGGTGACTCGAACTCACACCTAGAATTTGCACAGCTCACGTACCTTTCCCGTAGGCATCCATCTATATCATAGGATTTTGGCCTGGACCAATAGGAATGGAAACAGACCAGGGATTTTCCCAGAGAATAAAACCAGGAAACTTTTAATTCGCCACTGGACTGCTGTGTTTGGATTTGATCTGTTACTAGAGTCTAGTTAATACTTTTGTTTTTAAAAACTGAGGACAAATGAACATAAACGGAAACCTTGTGTCATGTTTGCTTTTGTTTTGATTTATAAATTGACCAACCCCAATCCCTTTTGACTTCTTTTCAAATAAAAAGGTGGAAATTCTGAGGGGTGCCCAAGGGGGTGAAAATGGTAAAAAAAAAAAAAAAGCGGGGGGTGGTGGTGGTTAGGTTATTTAGGCCCTATAGCTTTTTCATTAAGAATTTTTTGTTTTTAATTTGGGAAGGTAACTTTATTGAGGCATTAAAAAAAAAAATAACCTCTGCATTCTAAAGATGAGGGACCCTGAGTCAATGGATATTTTTCTGTAGGGATAAGTAAAGTCTGTCCTGCTTTATTTTTTGAGACGGCTGTAGGATGGGAAGGAAGGTGGTGAAAAATTGCCTGGGAAATGACAGTATTTGGGGAGGGAGTAGAAGAGGCAGCCTCGTGCAATTACTGTGTTGGGGGGAAGGGAGGAGAGGGGTGACATGCACTCAGAAGGAGCCAGATTCCTTAGTTGAGGGTGTGGTTGAAGGGGGGAGGCAGGCCCCCCAATCCTAATTGAGGGATATCATCTCTCAGGCTTAAATAAGTGCATTTAGTTATTGTAACCCCAGGCACTGGGGTACCTACTGAGGCTGTTGTTGGAGAGGGGAGATTTTCAGGGCTTTTATTTTTCCCTTTTTGATTTCAGACAGTGCTACCCCCTCTACTCACCCTAGATTCTCCATCTCAGCCCTGAAGGAGCAAATAGGTCTATAGGACACGCCTCCAGGTTCCTTTTAATTTATGCTGGTTTGATTGAGAGTTACAAGATTTAACCAAACATTTTTCCCTCACACTGGATTCTACAGCAAAATAAAATGATGATATTAAAAGGTTTTTTTTTTTTTTAAAAGATTCAGTCTCTTCATGGAGTGGTATGGTGTTCAACTCAGTGCTCTGTGGGGCCTGGAGGGAAGTTCCTTCCCTCTGCTGTTGGCTGTTTCTTCTCAAGTGAAACTAAAGCTCACAGACCAACTAAACAAAAATCAGCAATGACTTTTTAGTGTATGTTTGGGAGTGATAATGAACTGGAAAGGATGGAGCTGGTTCTGAATGACTTCTGAGAACCTAGCTTTTGCTATTCTTACCACTCTCTAAACAGCCACATGTCCAAAGTTCCAGTCACATTTTATCTTTCCCAATAAAGGAGTTTCAAAGATAATTGTCCCCAAGTTACTCCGACACCTCTGGACTCTGCATTGTCTTCTTTCTCCAAGGAGTCAGTGCCCCAGACCCACCACCACAGGTGAGAAGACAGAATTAGTAGTCCTCGTCCTGGAATCACCTGCACCACAGATTTTTCTAATTTCCTTTTCCCTCCAGGCCCTTCAACTACAGATTCAGTGACTCATACAGGCAGTCTGTTTCTTTCATTTTATAGAAATCACGGGCTGTTTTGCCCCCTGAACTTAAGTGGATTAACAGAATATTATACCCTCCATGGAGACTTTCTCCACAACCCCTCCTTTTACTGGCCACTTGGGGGCTGGGCATCTCTTCCGCCCTCTCCAGAGTCGACTGAAGTTTCCGTGGAGCCTTCTCTAGCTGGACTGGACACACCTTTCAGAAGACCCCACATCGTGCTCCTTGCACCTCAAGTGCTCCTTTCCCTTGAATCTTCCTCCTGCCCCTCTCCCTGACTTCCCTCCAGCTAGCTACAGGATTCAGCCTCTCCCCAAGGGGCTTGAGCATCCTCGAGGTTTTCCACCCTTGACCGCTCCATCCCCGGATGGAGCCAGAGAAATGTGGTGGGGGGGCCGGGGCCAGAGTTTCAACATCGCCCCC EMBV3_27270 CACCTTCGGACCTCTTCAAATGGTGACACATAGGAATCCTTCCAAGAGATACCCGTGTAC Gene GeneID:539238|ANK2:XM_002688100:173_cdna Constitutive 2 NULL GeneID:539238 6 GENE ANK2 NULL ankyrin 2, neuronal EMBV3_23382 TCTGGCTTAGGAGCGCCCATCAAGCTCTGGGTGTTCTGGGAAGATGGTATCATGTCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02965 CAAGGTCACACAGTCATGCTTAGTGGCAGAACAGGCGGGCTCGAGCAATGAACTTTGTAT Gene BVV0102_144130 + 0 NULL GK000003.2:31012918-31464989 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36873 AGGAAGTCCTGGGTTTTGGGGTGAGGAATGAGGAGGCTGAGACCTATGCAAGCCAGAACC Gene GeneID:526769|LOC526769:XM_002694192:684_cdna Constitutive 0 NULL GeneID:526769 16 GENE LOC526769 NULL similar to protein tyrosine phosphatase, non-receptor type 11 EMBV3_41851 CATCTGCAAGCCCCTTCACTACACAACCATCATGAGCCGGTCTCTGTGTCACCAACTGGT Gene GeneID:532501|LOC532501:XM_002693719:430_cdna Constitutive 0 NULL GeneID:532501 15 GENE LOC532501 NULL similar to olfactory receptor Olr737 EMBV3_19734 TCACAGTACTCCAGCTACCAGCAGGGACAAGGCCAGCAGTACGGAAGCTACCGAGCATCT Gene GeneID:768207|SS18L1:NM_001078095:1378_cdna UTR3_Alt 2 NULL GeneID:768207 13 GENE SS18L1 KIAA0693 MGC139314 synovial sarcoma translocation gene on chromosome 18-like 1 EMBV3_12193 GGCACCTTGGGGCAGAGGCAACACAAACATAAGGTCTCCATCAGCGGCTTTGATGCTCAA Gene GeneID:615879|EFNA4:NM_001101249:218_cdna Constitutive 1 NULL GeneID:615879 3 GENE EFNA4 NULL ephrin-A4 EMBV3_40251 CAGTGCTAACTAGGGGTGGGAGATTTCTGTCCATTAGGATATACTGGCCATTGGTCCCAC Gene BVV0102_181274 - 1 EMBV3_43312 GK000006.2:102666723-102687304 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03818 CAGGGGGTGGTGATCCGTACTTGGATGATATTGATGATGAGATGGACCCAGAGATAGAAG Gene GeneID:616051|LOC616051:XR_083787:198_cdna Constitutive 0 NULL GeneID:616051 10 PSEUDO LOC616051 NULL similar to PAIP1 protein EMBV3_30476 CAGGCGATAGGTTAACTGCATGGAGATGTGATCCCTGTACTGCCTCTTGGATTTGTGCTC Gene GeneID:768076|MGC137894:NM_001077132:333_cdna UTR3_Alt 1 NULL GeneID:768076 21 GENE MGC137894 NULL hypothetical protein MGC137894 EMBV3_23197 CTGTACCTCAGTTCATTGCCAGAGAGCCATTGTTTCTCTCCTGAGGCAAAGCCCAACACA Variant GeneID:614417|RBPMS:NM_001046535:28_cdna 652^782 2 EMBV3_42552 GeneID:614417 27 GENE RBPMS MGC137681 RNA binding protein with multiple splicing EMBV3_20452 GTGGTGCACCTCCTCAACGACCAGCATCTGATCGTGACGTCGGCCTCCACGGACCTTCAG Variant GeneID:515216|AP2A2:NM_001075702:281_cdna 537^638 1 EMBV3_29088 GeneID:515216 29 GENE AP2A2 NULL adaptor-related protein complex 2, alpha 2 subunit EMBV3_06768 CCAGTTCCCATTAGACCTTGATGTGAAAATGAAAGCTGTGATGCTCGGCGCATGTTTCCT Gene GeneID:513193|PLSCR1:NM_001034436:32_cdna UTR3_Alt 2 NULL GeneID:513193 1 GENE PLSCR1 MGC128844 PLSCR2 phospholipid scramblase 1 EMBV3_24584 TTACCTTTACTTTGGTGGCTTGCTTCCCTCATGCCCTGGAATACAACTCAGAGCTCCAGG Gene GeneID:100336802|LOC100336802:XM_002698912:103_cdna UTR3_Alt 1 NULL GeneID:100336802 28 GENE LOC100336802 NULL protein phosphatase 3, catalytic subunit, beta-like EMBV3_39485 CCAGCCCTTGATTCCTGTAGTTTTAAACCGCAAGCTGGCATGTTCTGACTTCTGAGCAGC Gene BVV0102_241168 + 0 NULL GK000018.2:57038862-57066163 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33258 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11384 GCTTCACCATCTGGCTGCTGATAGGACTCTTGGTGTATTTCGGCTACGGCATCTGGCACA Gene GeneID:504923|SLC7A4:XM_002694680:250_cdna Constitutive 0 NULL GeneID:504923 17 GENE SLC7A4 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 EMBV3_27784 CCTCCTTGTCTTCATGGCCGACCTCTCCTGATTGTAGCCTTCAGTCTGTACTTTGCCATT Gene BVV0102_132297 - 0 NULL GK000001.2:140348548-140368053 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011432 1 XLOC_006983 NonCoding TCONS_00011432 XLOC_006983 NonCoding NonCoding - 1:140350257-140350981 - TSS8509 724 1 TCONS_00011432_1 42 0.251381215469613 1 0 3.75848331132674e-05 1.3879055983483e-05 1.27817715803068e-05 0 0 0 0 0 0 0 0 6.00886753372454e-05 0 2.59889133934922e-05 0 7.295992837522e-05 2.29313413792851e-05 0.000658461595069083 0 2.97987804325105e-05 0 0 0.000430824488526586 0.000138933430272375 0 9.73130196566697e-06 0 0 2.68210487319366e-05 0 XM_005199316.1 LOC616903 PREDICTED: Bos taurus protein CutA homolog-like (LOC616903), 9e-57 224 91.72 0.215469613259669 NM_203778.1 cops5 Xenopus (Silurana) tropicalis COP9 signalosome subunit 5 (cops5), 1e-05 55.4 85.42 0.0649171270718232 0 noncoding GTGAGACAGTGAAATAATGAGAACATTTTATGATGCAGTTCATCAGATGCAAAATGGCAAAGTACAGACTGAAGGCTACAATCAGGAGAGATCGGCCATGAAGACAAGGAGGCGAAACCTGAGGATTCTCAGACGTGGCTTTTGAGCTTGGCTGAGAGAGAGAGATGTGATTCGGAGGAAGTACAGGTGGGGATGGGAGCATATGTAGAACGTCACATACTCCACTTGGAAAACCTGTTTCCTATGTTTTTTAATCAAGTCTTTAGACCTTGCTCTTTCTGATTCAGTTCTAGATACTGAAATTTCACTTGAGTCTTTGGGGATGTTAAGTCTTCAATTAGCAATTTAAGTAATAAAAAGGAACTTTGGACAGCTAAGATCAATAAATTTTAGGAATAAAGCTGGAGAGAGAAAAACACTATAATGTGATGTTGTTCTCTGTTTAGCTGTGATTAAACTTTTATTTTTACAAGTCCTTTTTGAGATACCTGGACGTGGGAAGTTGAATATATATATCCTTTAAATATAAATTTAAAGGCCTTTTTTTTTTTTTTGTCTTCACACTAATTTATTCTTTTTTTTTTCTTTTATTTTTAAACTTTACAATATTGTATTAGTTTTGCCAAACATCAAAATGAATCCGCCACAGGTATACCTGTGCTCCCCATCCTGAACCCTCCTCCCTCCTCCCTCCCCATACCCTCCCTCTGGGTTGTCCCAGTGC TCONS_00005458 TCONS_00005459 TCONS_00005460 TCONS_00005461 TCONS_00005462 TCONS_00005463 TCONS_00005464 . 3' 14960 TCONS_00005458 TCONS_00005459 TCONS_00005460 TCONS_00005461 TCONS_00005462 TCONS_00005463 TCONS_00005464 . 3' 15683 EMBV3_05461 GATCGCCGGCTCCGTGGAGGCGGTGGCGAGGAGTCCGCTCGGAATTTGATCAGATCGACA Variant GeneID:534183|LHPP:NM_001080912:48_cdna 182^369 3 EMBV3_05010 GeneID:534183 26 GENE LHPP NULL phospholysine phosphohistidine inorganic pyrophosphate phosphatase EMBV3_05264 GAGCTTTGCAGGGGTTTTTTGTATCCTCGCTGCTGGCATTGTCCTCTCCTGCTTTATAGC Gene GeneID:536367|GRID2:XM_002688145:4_cdna Constitutive 0 NULL GeneID:536367 6 GENE GRID2 NULL glutamate receptor, ionotropic, delta 2 EMBV3_35800 CTCCGGAGTTCTACAAAAGCTGCCTTCTTGAAACGTTTTCCAGAGCTTCTTATTACCAGC Variant GeneID:505736|FLJ10803:NM_001034256:25_cdna 109^208 2 EMBV3_43785 GeneID:505736 4 GENE FLJ10803 MGC127762 hypothetical protein LOC505736 EMBV3_35439 TGTCCATGCTGATGATCCCCCAGATCTCTCTCTGTCCAACAGGAACTGACAATACAGCAC Gene BVT0101_051782 + 0 NULL GK000006.2:37679898-37683702 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30274 GAAGAGACCCTCTAGGACATGGCCCCCGGTCTGTGCTTGTGTTGGCATTTTGCTAATAAA Gene GeneID:508652|RFC2:NM_001080903:122_cdna Constitutive 1 NULL GeneID:508652 25 GENE RFC2 NULL replication factor C (activator 1) 2, 40kDa EMBV3_39359 TGTTGGGTGGGTTAAGTTTGCTGTCTGGGCTGAGGATCAAGAAAAGGCTTCCAGGACTTT Gene BVV0101_016218 - 0 NULL GK000008.2:77828222-78188631 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25768 GGGGTGGCTGTTGCACTTGCAGCCTCACCTCCATGGCTTTCTCTCTAAAATCTTAACTCA Gene GeneID:504524|GM2A:XM_002689311:9_cdna Constitutive 0 NULL GeneID:504524 7 GENE GM2A NULL GM2 ganglioside activator EMBV3_42069 TTCAGAAATACAACAGCCTTCGGGAACAAGGAGACTTTGGAAGGAGTAGAGAGAGCCCCC Gene GeneID:789631|FIZ1:NM_001101308:205_cdna UTR3_Alt 2 NULL GeneID:789631 18 GENE FIZ1 NULL FLT3-interacting zinc finger 1 EMBV3_38111 ACTCTCTCACCGGGGACCTCACCGCCACCAATCTATTACAGTCACTCCCTCTAAAGTCCT Gene GeneID:506076|SLC26A10:XM_002687410:129_cdna Constitutive 0 NULL GeneID:506076 5 GENE SLC26A10 MGC155175 solute carrier family 26, member 10 EMBV3_26374 GACAGCGGCGAGCAGAACTACGGAGAGCGGGCAAATCCTGATCCCAACTGTTGTCTTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25459 GTGTGCTGTGTCATTATGCTACTCCTGCCCTTCTCTGTCATCTCTGTCTCCTATCTGCTG Gene GeneID:100299238|LOC100299238:XM_002689061:47_cdna Constitutive 0 NULL GeneID:100299238 7 GENE LOC100299238 NULL similar to olfactory receptor Olr1654 EMBV3_23900 GACAGGAGCTGTGTATCTCATTGGTAGCTGTGTCCTGGTTCTTCTGTTGTATCCATGCCC Gene GeneID:613397|LOC613397:XM_002683719:2_cdna Constitutive 0 NULL GeneID:613397 11 GENE LOC613397 NULL similar to olfactory receptor Olfr335 EMBV3_00440 TTAAGTGATAGTCCAAGAGATGAAGGGAAATGAACCATTCATAATATTTTCTGGTGGACT Variant GeneID:536735|STXBP5L:XM_002684788:131_cdna 670^956 1 EMBV3_41250 GeneID:536735 1 GENE STXBP5L NULL syntaxin binding protein 5-like EMBV3_21905 AAGAATGATAGAAACTGCACAAGTGGATGAGAGGGCAAAAGGCAATGGCTCCAGTCAGCC Gene GeneID:781001|LOC781001:XM_002700133:80_cdna Constitutive 0 NULL GeneID:781001 X GENE LOC781001 NULL hypothetical LOC781001 EMBV3_27583 AGCACGGTTCCAACAGGAGGAGGGATCACAGGAACGTCAGGATAAAGCAGCCAGACTATA Gene GeneID:508825|MRPL23:NM_001077884:251_cdna Constitutive 0 NULL GeneID:508825 29 GENE MRPL23 NULL mitochondrial ribosomal protein L23 EMBV3_26105 GGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCC Gene BVT0102_108879 - 1 EMBV3_26788 GK000015.2:81309912-81366668 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00111527 TCONS_00208613 TCONS_00148278 TCONS_00214738 TCONS_00249013 TCONS_00115729 TCONS_00209773 TCONS_00220662 TCONS_00251890 TCONS_00066215 TCONS_00187806 TCONS_00152890 TCONS_00251713 TCONS_00135528 TCONS_00207978 TCONS_00070841 TCONS_00197486 TCONS_00208128 TCONS_00090409 TCONS_00148452 TCONS_00091329 TCONS_00252237 TCONS_00189889 TCONS_00177994 TCONS_00250442 TCONS_00095034 TCONS_00048822 TCONS_00207077 TCONS_00088289 TCONS_00049393 TCONS_00244654 TCONS_00187583 TCONS_00233691 TCONS_00089425 TCONS_00116799 TCONS_00218396 TCONS_00098229 TCONS_00091802 TCONS_00189806 TCONS_00152647 TCONS_00148253 TCONS_00072406 TCONS_00148670 TCONS_00019962 TCONS_00207846 TCONS_00089139 TCONS_00239410 TCONS_00250939 TCONS_00088086 TCONS_00166140 TCONS_00008700 TCONS_00252006 TCONS_00229974 TCONS_00046648 TCONS_00238893 TCONS_00244651 TCONS_00239411 TCONS_00162783 TCONS_00038382 TCONS_00040697 TCONS_00129427 TCONS_00166330 TCONS_00238308 TCONS_00161836 TCONS_00107533 TCONS_00055678 TCONS_00107833 TCONS_00160965 TCONS_00167528 TCONS_00031280 TCONS_00249573 TCONS_00251994 TCONS_00055304 TCONS_00210178 TCONS_00017462 TCONS_00218852 TCONS_00244653 TCONS_00200531 TCONS_00130850 TCONS_00249090 TCONS_00071379 TCONS_00020171 TCONS_00222057 TCONS_00056147 TCONS_00021194 TCONS_00064858 TCONS_00019991 TCONS_00040834 TCONS_00006828 TCONS_00198434 TCONS_00019197 TCONS_00250369 TCONS_00250030 TCONS_00250581 TCONS_00040896 TCONS_00129450 TCONS_00175881 96 XLOC_131641 XLOC_067427 XLOC_127126 XLOC_090160 XLOC_130757 XLOC_151956 XLOC_069898 XLOC_128284 XLOC_133979 XLOC_154831 XLOC_040929 XLOC_113849 XLOC_092655 XLOC_154654 XLOC_081751 XLOC_126492 XLOC_042618 XLOC_119147 XLOC_126641 XLOC_055190 XLOC_090332 XLOC_056104 XLOC_155178 XLOC_115926 XLOC_107767 XLOC_153385 XLOC_057631 XLOC_028953 XLOC_125596 XLOC_053076 XLOC_029524 XLOC_150512 XLOC_113628 XLOC_143172 XLOC_054210 XLOC_070965 XLOC_131716 XLOC_058475 XLOC_056573 XLOC_115843 XLOC_092412 XLOC_090135 XLOC_044175 XLOC_090550 XLOC_010640 XLOC_126361 XLOC_053925 XLOC_146076 XLOC_153882 XLOC_052873 XLOC_100978 XLOC_004257 XLOC_154947 XLOC_139468 XLOC_026788 XLOC_145559 XLOC_146077 XLOC_099664 XLOC_022207 XLOC_024513 XLOC_078140 XLOC_101168 XLOC_144975 XLOC_098721 XLOC_063443 XLOC_033486 XLOC_063743 XLOC_097858 XLOC_102364 XLOC_017528 XLOC_152516 XLOC_154935 XLOC_033112 XLOC_128688 XLOC_009039 XLOC_132171 XLOC_122183 XLOC_079556 XLOC_152033 XLOC_043150 XLOC_010849 XLOC_135366 XLOC_033950 XLOC_011867 XLOC_039582 XLOC_010669 XLOC_024648 XLOC_002390 XLOC_120088 XLOC_009877 XLOC_153312 XLOC_152973 XLOC_153524 XLOC_024710 XLOC_078163 XLOC_105660 Coding TCONS_00222057 XLOC_135366 Coding Coding - 7:70682995-70686837 - TSS166055 3842 2 TCONS_00222057_5 115 0.997917751171265 1 0 5.05901659931964e-07 4.79493141964255e-06 0 0 5.71135386159485e-07 1.33005749818789e-07 0 1.71054331302813e-07 1.30064629441795e-06 1.07092175724304e-06 1.48958039000441e-07 4.13638474427097e-06 0 2.44871816558218e-07 1.59623789052634e-07 0.00332700385437757 0.000192296171611 0.00859026605852141 1.86645827677117e-06 1.07770000193695e-05 6.58452760786576e-07 0.000464821333825734 0.000262264095623234 0.000504714169171867 5.63546402276529e-06 1.83380325625921e-06 1.6944788577739e-06 4.58341979923324e-06 6.31781897174857e-06 2.73853284638068e-06 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-114 417 93.48 0.0715773034877668 TCONS_00222057_9 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 2e-22 90.9 45.26 0.92156862745098 1 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 CCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGAGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGGATGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCCTGGGGTCGCAAAGAGTTGGACACACTGAGCGACTGAACTGAACTGAACTGAAGACATCACCAGACCCACTCACAGAACAAAGGACTGAGCAGAACTAGCCAGCTGTGGATGGGCCCATCCCCCACCGGAGACAAGCAGGGGAGGGCAGCCAGAGCCGGAAGGGGGCAATCTCGACCTCAGAGAGGCATCCTCTACCAAACTGCAAGCAGGCTTCACTGCTAACCAAGACTTCTTGGGATTCTGGATGGTCAATCCACTGGGAGGATCACAACCAGAGATCAGCCTCCCAGAAGAGACACACAGATCACCTGAGAAGGCGCGGCCGCTGTACACCCAGAACACCGAGCGCCGGACGGGGAGGCCATAAGACACAGCCTCCAACAGGGGGTGGGGGACTGTACTCACCAAACACCTGGTCACCTGAGCTGCTCGGACCTGGGAAGGGCACAAAATGCAGGCCCAACCAAGTCTGAGCCTTTGTGGACTACCCGAGAGCCTGAACCTGAGCGGCTTAGACCTGGGCAGTGCATGCAACCCAGGGCCTGCCACAGACAGTTCCCCGCAGAGCAACCTAGAGCCTGAGCAGTGTAGACTGGGAAAGCACACACGCCGTGAGCAGGGGCAAACCTGGTGTGGCCGAGACACTGCGAGCACTCCCCACACATGCCAGTGATATTTGTTTGCAGTGTTCCTCCCTCCCCACAGCACGATTGAACAAGTGAGCCTAAGAAAAGTGACCTCCACCAGCCCCTTGTGTCAGGGCGGAAATTAGACACTGAAGAGACCAGCAAACAGAAGAAGCTAAAATAAACAGAAGGAACCGCTTTGGAAGTGAGAGGTGCAATAGATTAAAACCCTGTAGTTAACACCGACTACATAGGAAGGGGCCTATAGATCTTGAAGAACTATAAGCCAGAGCGAGGAACTATCTGAAAATGAACTGCCCCAAACTGTCTGCAACAGCTCCAGAGAAAGTCCTAGATATATTTTTTACTATTATCATTTTATAAATTTTCATAAAATTTTTTATATTTTTAAGTCCTATATTACTCCTTTAATTTTTATTTTTATAACCTACTACTACTACTACTCAGTCGCTTCAGTCATGTCCGATTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATTGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTATAACCTACTATTACCTTGCAAAAAAAAAAAAAAAAAAAAAAGACCCTATTTTTAAAGCAAACTTCATATATATCTATATATTTTTTATAATTTTGTGACTTTGTTTTGTTTTTTTTAATATTGTATTTTTGAGAATCTAACCTCTACTCTAGATTTTTAATCTTTGCTTTTTGGTATTTGTTATCAATTTTGTACATTTAAGAACCCAATCTTCAGTACCCATTTTTACTTGGGAGTGAGATTACTGGCCTGATTGCTGTCTCCCCCTTTTGACTCTTCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCCTTCTCTTCTCTACCCAACTCTATGAATCTCTTTGTGTGTTCCAGGCTGTGGAGAACACTTAGGGAACTGATGACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCGCCTATTATCCTCCTGGCTACCTCTGTCTCTCTCCTTTTGATTCCACCTATTATCCTTCTGACTACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCATGAACATCTCTGAGGGATCCAGACTGTGGAGAACACATAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCCCTTTTGATTCCCACTCTTCTCCAAACCCACTGACATCTCAAAACTCACTACTGGACACTTCATTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAGCACTGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCCATCCAACCCCACCCACAGTGAGGAACCTCCAAAATAAAAAGGAACCACAAACTGCCAGAATATGGAAAGGCCACCCCAAACACAGCATTATAAACAAGATGAAATGGCAGAAAAATACTCATCAGGTAAAGGAACAGGATAAATGCCCATCAAACTAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAAATGACCCAAAATCTTGAAAACAAAACGGAGTCACAGATAAGTAGCCTGGAGACAAGGATTGGGAATATGCAACAAATGTTGAACAAGGACCTAGAAGAAATAAAAGAGACAATATATAATGAATAATGCAATAAATGAGATCAAAACCCTCTGGAGGGAACCAACAGTAGAATAATGGAAGCAGAAGATAGGATAAATGAGGTAGAAGGAGTGTTAGAAATAAATGAAACAGAGAGGAAAAAAGAATTAAAAGAAATGAGGACAAACTCAGAGACCTCTGGGACAATGTTAAACAACCCAACATTCGAATCATAGGAGTCCCAGAAGAAGAAGACAAACAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAGTCACCCAAGTCCAAGAAACCCAGAGAGTCCTAAACAGGGTAAACCCAAAGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAGTATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGAAGGGAATGGCAGGACATACTTAAAGTGATGAAAAAGGAAAAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCACTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAGAAAGGGTGTATAAACTCAAACCCAAAACAACAAAGTAAACGGCATTGGGATCATACTTATCAATAATTACCTTAAATGAAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAAAAACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGTGATGGAAAAAGATATTCCATGCAAATAGAGACCAAAAGAAAGCAGGAATAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAGGAAACAAAGAAGGATACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACATAGGACCACCACACTATGTAAGACAAATGCTAACAAGTATGAAAGGGAAATTAACAGTAACACAATAATAGAGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAAATAAACAGAAAAT TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 24667 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 28508 EMBV3_10640 GACCCCTTTTTTGTGATAATGTTTTGCACTTTTTCGTACAGGGGATGGGGGTGGGAGGGG Gene GeneID:523124|PSD:XM_002698453:460_cdna Constitutive 0 NULL GeneID:523124 26 GENE PSD NULL pleckstrin and Sec7 domain containing EMBV3_01990 GGGGCAATCACAGCCCCAGAGAGACATTATCTATAAAACTGTAAGCAGGCTTCTTTGCTA Gene BVV0102_457599 + 1 EMBV3_05471 GK000003.2:54735404-54759287 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00206812 TCONS_00231338 TCONS_00066283 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00220662 TCONS_00153678 TCONS_00129573 TCONS_00078473 TCONS_00177370 TCONS_00175855 TCONS_00218945 TCONS_00175580 TCONS_00250930 TCONS_00166977 TCONS_00008224 TCONS_00021569 TCONS_00137878 TCONS_00244654 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00189806 TCONS_00229819 TCONS_00185881 TCONS_00062744 TCONS_00109027 TCONS_00155780 TCONS_00124585 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00064462 TCONS_00178325 TCONS_00161667 TCONS_00010054 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00110323 TCONS_00130290 TCONS_00063486 TCONS_00020756 TCONS_00070839 TCONS_00010471 TCONS_00088088 TCONS_00021595 TCONS_00199424 TCONS_00155778 TCONS_00161835 TCONS_00071033 TCONS_00059708 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00249569 TCONS_00116665 TCONS_00231612 TCONS_00070810 TCONS_00222114 TCONS_00131550 TCONS_00199037 TCONS_00110403 TCONS_00122479 TCONS_00180345 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00218178 TCONS_00224113 TCONS_00229957 TCONS_00152736 TCONS_00116100 TCONS_00250720 TCONS_00010366 TCONS_00038381 TCONS_00242885 TCONS_00209846 TCONS_00023373 TCONS_00207069 TCONS_00175546 TCONS_00209711 TCONS_00116172 TCONS_00009884 TCONS_00252107 TCONS_00148280 TCONS_00056146 TCONS_00249011 TCONS_00176735 TCONS_00123620 TCONS_00031939 TCONS_00131137 TCONS_00039951 TCONS_00155779 TCONS_00063181 TCONS_00009259 TCONS_00234065 TCONS_00111497 TCONS_00207844 TCONS_00209636 TCONS_00007431 TCONS_00019961 TCONS_00245928 TCONS_00233372 TCONS_00244651 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00085967 TCONS_00199802 TCONS_00250246 TCONS_00238327 TCONS_00040740 TCONS_00040179 TCONS_00064619 TCONS_00200529 TCONS_00244653 TCONS_00115148 TCONS_00250726 TCONS_00221884 TCONS_00142649 TCONS_00122313 TCONS_00020023 TCONS_00251907 TCONS_00218898 TCONS_00218552 TCONS_00007359 TCONS_00166449 TCONS_00031910 TCONS_00251929 131 XLOC_107421 XLOC_069855 XLOC_125332 XLOC_140827 XLOC_040997 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_133979 XLOC_093441 XLOC_078286 XLOC_047361 XLOC_107144 XLOC_105634 XLOC_132264 XLOC_105361 XLOC_153873 XLOC_101813 XLOC_003782 XLOC_012242 XLOC_084087 XLOC_150512 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_115843 XLOC_139313 XLOC_111934 XLOC_037471 XLOC_064932 XLOC_094822 XLOC_076129 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_039186 XLOC_108098 XLOC_098554 XLOC_005606 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_066227 XLOC_079001 XLOC_038213 XLOC_011431 XLOC_042616 XLOC_006022 XLOC_052875 XLOC_012268 XLOC_121077 XLOC_098720 XLOC_042806 XLOC_036490 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_152512 XLOC_070831 XLOC_141100 XLOC_042587 XLOC_135423 XLOC_080255 XLOC_120690 XLOC_066307 XLOC_074034 XLOC_110113 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_131641 XLOC_137409 XLOC_139451 XLOC_092501 XLOC_070269 XLOC_153663 XLOC_005917 XLOC_022206 XLOC_149548 XLOC_128357 XLOC_014040 XLOC_125588 XLOC_105327 XLOC_128222 XLOC_070341 XLOC_005437 XLOC_155048 XLOC_090162 XLOC_033949 XLOC_151954 XLOC_106509 XLOC_075172 XLOC_018184 XLOC_079842 XLOC_023768 XLOC_037908 XLOC_004815 XLOC_143544 XLOC_067397 XLOC_126359 XLOC_128147 XLOC_002992 XLOC_010639 XLOC_150855 XLOC_142854 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_052005 XLOC_121454 XLOC_153189 XLOC_144994 XLOC_024554 XLOC_023996 XLOC_039343 XLOC_122181 XLOC_069449 XLOC_153669 XLOC_135195 XLOC_087074 XLOC_073868 XLOC_010701 XLOC_154848 XLOC_132217 XLOC_131872 XLOC_002920 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00218178 XLOC_131641 NonCoding NonCoding - 7:99213677-99241810 - TSS162275 5729 2 TCONS_00218178_2 157 0.905568161982894 3 0.796459547845869 0.000886771403701653 0.00102376193620026 0.000637427881539969 0.00060712227498956 0.000861658363640783 0.000240511398755287 0.0006507876490391 0.000334216051602831 0.000730185142003349 0.000214057065001311 4.3941352307135e-05 8.08315428101829e-05 0.000233250163478171 0.000763452724724909 0.000798732785629046 7.35735537230835e-05 3.13399592248213e-05 3.72164237701071e-05 0.000220143769383598 0.000283865233785678 0.000112882883633591 4.31142807595197e-05 6.58079553498174e-05 3.90706298563263e-05 0.000459456809083102 0.000383679264587045 0.000370165826075435 3.40174828754841e-05 6.31436507816371e-05 7.1976296098839e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 3e-131 475 97.51 0.0488741490661546 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-83 315 68.10 0.168964915342992 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 -0.0148602594801673 0.803029043356466 CTGCTCTAATTTTTAAGATTTCTTTCCTTCTACTAACCCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTATAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTAAGGTATGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGCCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGGTTTTTTCCTGTAATTGAGATCTAATCTTACTGCATTGTGGTCAGAAAAGATGCTTGGAATGATTTCTATTTTTTTTTAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGATGAAATGTCCTATAGATAGCAATTAGGTCTAACTGGTCTATTGTATCGTTTAAAGTTTGTGTTTCCTTGTTAATTTTCTGTTTAATTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGTGGCACTCCCGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGATCATCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAACACATGCAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCGTTGCCATTTACTTTATTGTTTTGGGTTTGAATTTATACACCCTTTTTGTGTTTCCTGTCCAGAGAATATCCTTTAGTATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGAAAAGCTTTTGATTTCTCCTTCATACTTGAATGAGATCCTTGCTGAGTACAATAATCTGGGCTGTAGGTTATTTTCTTTCACCATTTTAAGTATGTCTTGCCATTCCCTCCTGGCTTGAAAGGTTTTTATCGAAAGATCAGCTGTTATCCTTATGCGAATTCCCTTGTGTGTTATTTGTTGTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTTGTGTTTGATCTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCTCCTTGGGTTTATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCAACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACCCCTATGATTCGAATGTTGGAGCATTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTTTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCCTTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTCATTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTGATTTCAAGATTTTGGATCAATTTCACTATCATTATTCAGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGAGCATTTATCCTGTTCCTTTATCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTAAATTTCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCGCTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGGACGCTTGTGTTGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTAGAGTGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATTAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTCCAGTTATTGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATCGATAAAACATCTACGTTAAAGATGAAAAGTTTCTCTACCGTGAGGGTCACCCAGAGAGGTTCACCGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAATCACTTCCTCATGTGCACTCCACAACTGGACCTCTCAGAGATGTTCACGGAGTTATACAGAGAAGAGAAGAAGGAGGAAGGAGACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAACTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGAGTCCAAAGGGAGAGAGAGCAGTTAAGCCAGTAATCTCATTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTTTGGAATTTCAAAAATATGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAAAATGAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAATATAGGTACAAAATTGATAACTAATACCAAAAAGCAAAAGTTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTAAAAAAAAGAAGATGAAAAAGAAAGAGAGAAAAACAAAAAACAAAACCAATGTCACAAAAATTATAAAGAAAATACAGGTACAAAATTGATATCAAATACCTAAAAGCATAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGGGGAAAAAAAGTCACAGAAATTATAAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGCTAAAGAAAAGAAAAAAAAAAACAAGGTCAAAAAATTATAAAAATATATATATATATGAAGTTTGCTGAAGAAAAAAAAATAGGGTCTTTTTTTTGTGCAAAGTAATAGGTTATAAAAGTGAAAATTAAAGGAATAATAGAGGACTTAAATTTTTTTTTAATTAAAAAAGAAAGAAAGAAAAAATGATCATAAAAGTAGTAAAAATATATCGAGGACTTTCTCTGGTTTTGTTGTGAGTATTGTGGGTTCAGCTCATTTTTGGCTAATTCCTTGGTCCGATTTATATTTCTCGAGATCTATAGGCCCCTTCCTATGTAGTCGGTAGTAACCACAGGGTTTTAATCTATTGCCTGTAGCTTCCAAGGCAGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGGTTTCCACCCTGACACAAAGAGGATGGTGGAGGACACTTTTTTTTTTTTAGGCTCACTTGTTCAGTTGCGCAGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCACAGTGCCTCAGCCACACTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGTTCCGCCGGGAACCATCCATGGCCAGCCCTGGGCTGCCTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCCCTCGGGTAGTCCTCAGAGGCACAGACTCAGCTGGGCCTGCATTTTGTGCCCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTAAGCGAGCACGATTGCTGCGACTTATCACCTCCCCGCCACTTGGTTATCTAGGTGTACAACCGGCGCACCTTCTCAGGCAGATGTTAACCATCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGAGATTGCCCCCTTCCAGCTCTGGCTGCGTGTCACCCGAAGGGGAAGGTCTGCAGCCGGCTATCTCTGTTTAGTCCTTTGTTCTGTGCGTGGGCCTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGTGTGGTAGATATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCACTCAGATAGCGCTCAGGGTATTCAGGCCAGGTCCTTACTCTAAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCCGCTTGCTAACGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGCAATCTGCGAGTTTTAATTGTTTATTTATTTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTTGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGACTCCCTTCCCGGGACAGAACTCCATCCCTCCCTCTTTTGTCTCTTATTTTGTCTTTTATATTTTTTTCCTACCTCCTTTCGAAGACTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCTGGCATTCAGAAGTTGTTTTGTGGAATTTACTCAGCATTTAAATGCTTTTTTTGATGAATTTGTGGGGGAGAAAGTGTTCTCCCCATCCTACTCCTCCGCCATCTTGGCTTCTCCCCCTTTAACAGTTTTATTTCAAGCCAACACCTGAGGCAAATATAAGGGATAAGGGATGAGGTCTTAAAAGTTGATCATGTGCTGTAGTAGGTACATATGTTGCCTTCAGCCTACCTCCTTCTTTGGAAACAGCCTCTCCTGACCTTCTTTTTCTACATTATTGTTTCCAGCCTGTCTTCTTTCACAGTACTAATTGGACCAGGTGTGGATCACTGAGCCAAGAAATTCAATCAGTGTTCACCTGGAGAAACAGAACTGAAGGAAGCGGACCTGGACCTGGGGCACAGAGGTGTCAGCATGTTCAAACACAAGCAAGTCAAAGTTACTGTCAATAGGAGAACGATCTAATCTCTGTCCTGCCCATGCACTACCAACAATCCTAAACCTACTATATCTACCAGAACAAAGAGGAATCGGATACCAAGACGGTCTTAACGCTGGATCCACTGCTTTGATTTTAGCAACTTCGGGGAAGAACTTAACCCTGATTCCTCTCTCTAAAGAAAAAGAAAAAAAAGAAAATGAAGAAGAAAATCCTGACTT TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178422 TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178503 EMBV3_31935 CATTCTATTACAGGTCTCCCGCCTGCCATGCAAAAATATCTATATCCAATCTGAGGTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09272 TCTAGACACAGCCAGTGGTACGAAAGGAGAAGAGAGTCACAGAAAAACCACTCCCTGGGA Gene GeneID:504418|SLC25A19:NM_001045887:341_cdna Constitutive 2 NULL GeneID:504418 19 GENE SLC25A19 MGC137486 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 EMBV3_38328 CTACAACTCGGATTACTCAGGCCTGAGCCACTCAGCCTTCAGCAGCGGTGCCTCTTCGCA Gene GeneID:784504|SP8:XM_002686706:8_cdna Constitutive 0 NULL GeneID:784504 4 GENE SP8 NULL Sp8 transcription factor EMBV3_05835 CACAACTGTACAGCAAGCTTACAGTAAGAGGTTCGTGTTTTATTCGAACTGATCAACTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14411 TGGGAGCCTTGATTTTTGAAAGGTGAGCCCTTAGCTTCCCGACCAGAGCTCCTGTGATCA Gene BVV0102_271939 + 0 NULL GK000016.2:52725749-52742636 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08742 GTACTACCTCAGCTACAAACCCTGGAAAATCAGCAGTGGGCATAAAGAGGAGGTGAAGCC Gene BVV0102_309302 + 0 NULL GK000010.2:61432639-61503725 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09797 CATGAGCGTACCCTTCAAGCGTCTGTCGGTGGTCTTTGGAGAACACACACTGCTTGTGAC Gene GeneID:511903|LOC511903:NM_001166607:149_cdna Constitutive 0 NULL GeneID:511903 25 GENE LOC511903 NULL similar to CG14977-PA EMBV3_09011 GTGCAGGCATGGCCTGCGTCACAAGCGACACAAACGTCATTTGTACGAAGCCGCAATAAA Gene GeneID:615666|MRP63:NM_001034787:70_cdna Constitutive 0 NULL GeneID:615666 12 GENE MRP63 MGC128095 mitochondrial ribosomal protein 63 EMBV3_43105 AGCAGGAGCAGGAGACAGAGGATGAGACCCAAGATGATGACCTGGATGAACTGATGGAGA Gene GeneID:529223|LOC529223:XR_084143:30_cdna Constitutive 0 NULL GeneID:529223 X PSEUDO LOC529223 NULL similar to KIAA2001 protein EMBV3_35135 AGACTTCACCTTCTAATATAGGGGGTGTGGATTCAAGCTATGGTGGGGGAATTAAGTTCC Gene GeneID:509481|HAO2:NM_001035071:41_cdna Constitutive 2 NULL GeneID:509481 3 GENE HAO2 HAOX2 MGC128394 hydroxyacid oxidase 2 (long chain) EMBV3_29826 TAGACCACACAAGTGGTTACATTTAAAGGGATCGTGGTCTGGGACGCCAAGAGAGTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19764 GACTTCATCGGGGCCAGCGGGTTTGTTAGCGACGTCATTGGGCTTAACCAGAAGCTGCTT Gene GeneID:100125761|PLCXD1:NM_001105044:2_cdna Constitutive 0 NULL GeneID:100125761 Un GENE PLCXD1 MGC179363 phosphatidylinositol-specific phospholipase C, X domain containing 1 EMBV3_39651 CTTGGATTTGGAACCTATGCACCTCCAGAGCTTTGGTTAACTTCCCTTCGACCAGAGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01676 ACGCGAAGCTCACCAAGATCGAGACGCTGCGCTTCGCCCACAATTATATCTGGGCGCTGA Gene GeneID:540130|NEUROG3:XM_002698866:460_cdna Constitutive 0 NULL GeneID:540130 28 GENE NEUROG3 NULL neurogenin 3 EMBV3_06317 AGATACACTGCCATTTGCTGCCTAGCAAGGATTCATAGCAATGGCATTGCCTCAAGAGAC Gene BVT0102_012802 + 1 EMBV3_37698 GK000009.2:47900287-48474664 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23113 GCTACTGAAGCATCTGGGGAGGCAGACGAGCCTTTCTGAGTAGTGACAGGAGAATTCCTA Gene BVT0102_097093 + 0 NULL GK000011.2:100057353-100114132 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35377 CAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAG Gene BVT0102_156763 + 0 NULL GK000023.2:29698979-29764538 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00010367 TCONS_00190335 TCONS_00214738 TCONS_00078532 TCONS_00250553 TCONS_00098385 TCONS_00220662 TCONS_00187806 TCONS_00251713 TCONS_00141355 TCONS_00197486 TCONS_00031938 TCONS_00020176 TCONS_00091329 TCONS_00006357 TCONS_00177994 TCONS_00048822 TCONS_00088289 TCONS_00244654 TCONS_00116799 TCONS_00089425 TCONS_00019992 TCONS_00189806 TCONS_00039673 TCONS_00152647 TCONS_00148253 TCONS_00072406 TCONS_00125002 TCONS_00089139 TCONS_00239410 TCONS_00233373 TCONS_00088086 TCONS_00130260 TCONS_00238893 TCONS_00244651 TCONS_00239411 TCONS_00162783 TCONS_00129427 TCONS_00238308 TCONS_00219681 TCONS_00161836 TCONS_00251853 TCONS_00206708 TCONS_00141464 TCONS_00055304 TCONS_00210178 TCONS_00141615 TCONS_00017462 TCONS_00218852 TCONS_00244653 TCONS_00087836 TCONS_00200531 TCONS_00222772 TCONS_00020844 TCONS_00222057 TCONS_00056147 TCONS_00019991 TCONS_00040834 TCONS_00197973 TCONS_00019197 TCONS_00238359 TCONS_00207228 TCONS_00250030 TCONS_00216423 TCONS_00175881 64 XLOC_131641 XLOC_005918 XLOC_116370 XLOC_130757 XLOC_047420 XLOC_153496 XLOC_058631 XLOC_133979 XLOC_113849 XLOC_154654 XLOC_085783 XLOC_119147 XLOC_018183 XLOC_010854 XLOC_056104 XLOC_001920 XLOC_107767 XLOC_028953 XLOC_053076 XLOC_150512 XLOC_070965 XLOC_054210 XLOC_010670 XLOC_115843 XLOC_023490 XLOC_092412 XLOC_090135 XLOC_044175 XLOC_076545 XLOC_053925 XLOC_146076 XLOC_142855 XLOC_052873 XLOC_078971 XLOC_145559 XLOC_146077 XLOC_099664 XLOC_078140 XLOC_144975 XLOC_133000 XLOC_098721 XLOC_154794 XLOC_125229 XLOC_085892 XLOC_033112 XLOC_128688 XLOC_086043 XLOC_009039 XLOC_132171 XLOC_052625 XLOC_122183 XLOC_136079 XLOC_011519 XLOC_135366 XLOC_033950 XLOC_010669 XLOC_024648 XLOC_119632 XLOC_009877 XLOC_145026 XLOC_125746 XLOC_152973 XLOC_131234 XLOC_105660 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_24208 ATTCAAGGTGAGAGGAGTGTACGGGGTGTGTAAACCAGGGATCGGAATCTTGGGAGCCAG Gene BVV0102_188684 - 1 EMBV3_06965 GK000010.2:43178384-43211975 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24378 CTTCCAGCTAAGCCTGTATGAAAATCAGGTTACAAATGGACCACGACTCCAGGGTGTTCT Gene BVT0102_009951 + 0 NULL GK000021.2:31192890-31196236 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119117 TCONS_00119118 TCONS_00119120 TCONS_00119119 1 XLOC_072818 Coding TCONS_00119118 XLOC_072818 Coding Coding DNAJA4 21:31178543-31194565 = TSS89282 2879 1 TCONS_00119118_2 312 7 0.820735284938518 0.00610437654739244 0.00770545822078348 0.00513646430461809 0.00577598733148924 0.00442099034252474 0.00233583400938215 0.00313562691553159 0.00430736789270839 0.00551295314154625 0.000407304772367067 1.35171685919403e-05 4.843742281754e-05 0.000211095211962777 0.00116745863091186 0.000936899306575582 0.00823205383596539 0.00625686724192233 0.0038956679820949 0.00615596349097408 0.00869583914521542 0.00249585396613491 0.00135394495371207 0.00116491888004418 0.00391479039622587 0.00786829358286052 0.00665146842128347 0.00562388513186997 9.67520440524844e-05 0.000231010974068722 0.000194212475953041 NM_001102120.2 DNAJA4 Bos taurus DnaJ (Hsp40) homolog, subfamily A, member 4 (DNAJA4), 0.0 5178 99.90 0.999652657172629 NM_018602.3 DNAJA4 Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 4 (DNAJA4), 0.0 2957 83.00 0.999652657172629 TCONS_00119118_2 sp|Q8WW22|DNJA4_HUMAN DNJA4_HUMAN DnaJ homolog subfamily A member 4; 0.0 608 94.87 0.996794871794872 2 coding 0 0 0 0 -0.318656614717289 0.154349083062195 -0.0376448067548144 0.444385811617319 CCTATCGGAAGCTGGCGCTCAAGTACCACCCAGACAAGAACCCGGATGAGGGCGAGAAGTTTAAGCTCATATCCCAGGCATATGAAGTGCTTTCAGATCCAAAGAAAAGGGACATTTATGACCAGGGTGGCGAACAGGCCATTAAGGAAGGAGGCTCAGGCAGCCCCAGCTTCTCTTCCCCCATGGACATCTTTGACATGTTCTTTGGTGGCGGAGGACGGATGGCTCGAGAGAGAAGAGGCAAGAATGTGGTACATCAGTTGTCTGTAACTCTTGAAGATTTATATAATGGAGTCACAAAGAAATTGGCTCTCCAGAAAAATGTAATTTGTGAGAAATGTGAAGGCGTTGGTGGGAAGAAGGGGTCTGTGGAGAAGTGCCCGGTGTGCAAGGGGCGAGGGATGCAGATTCACATCCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGACCGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCTGCGAAAGCTGCAACGGTGCCAAGGTCATCCGAGAGAAGAAGATTATCGAGGTACACGTGGAGAAAGGTATGAAGGATGGGCAAAAGATACTATTTCATGGAGAAGGAGATCAGGAGCCCGAGCTGGAGCCTGGTGATGTCATAATTGTGCTTGATCAGAAGGATCATAGTGTCTTTCAGAGACGAGGCCATGACTTGATCATGAAAATGAAAATTCAGCTTTCCGAAGCCCTTTGTGGCTTCAAGAAGACGATAAAAACACTGGATGATCGAGTCCTTGTTATTACATCTAAATCAGGTGAGGTGATAAAGCACGGGGACCTGAAATGTGTACGTAATGAAGGAATGCCGATCTACAAATCACCTCTGGAGAAAGGGATTCTGATCATACAGTTTTTAGTTATTTTTCCTGAAAAACACTGGCTTCCCCAAGACAAGCTTTCCCAGCTGGAAGCTCTGCTCCCACCTCGACAGAAAGTCAGGATTACAGAGGACATGGATCAGGTGGAGCTGAAGGAGTTTAATCCCAACGAGCAGAACTGGCGGCAGCACAGGGAAGCCTATGAAGAGGACGATGACGGGCCGCGGGCTGGAGTGCAGTGCCAGACGGCATGACGCGGCCCCGTACAGTGTGGCCTGGCGGGACTAGCACATCATGAATGTAAAGTTGGCACAATGAAAAATGGCATCGCTTTAACGGCCTCGTGTTTGGGGAGTCCTGTGTATGTGTTCAGCATTCTCAACTGCTGAGTGTCTTTTGGTTTTTCTTTTGTTTTTCTTTTGGTTGTAACTTAAGTTATAGCTTAATTTATATTTAAATGTTTTAAGTGTAAATCACTAGTCTGCATATGGAATCTGTTTATTTACATTTTCAGGATGTTTTTGAGATGCCAGTGAACGCACTGACACTTTGTGCTTCTAGTGGCTTTGCCATAATTCAGTTCCACCAATAAAGCACAGCCCAGACAGGAGCACTCAGCCCCCCAGCAAACCTCCAGGCGCGAAGTGGGTGACCTGGCCCACGTCCAGCTCTGCAGTTTCTTCCCCTCCGCACCTGCCTCCCAAGGCAAAGTTACGGAGGGCATGATCTCAGGGCTGCTAATGTTACATTTCCGAATCTAGATTCTAGATGGTTCTCAAGAATAAAAGCACATCTGTGGGCTGGATTTGGCTGCAGTGCCTGGCTCACACTGAGTGGGCTGCAGGGCCAACTTGGTTCCTACTGTCTTACGCCCTTGAGTGTTTGGAGTGGGGTGGGTCTGATCATCTCTTTTGGAAGCTTCCTGAGCCTTCCAGGCCTTGTGGTGAGGACAAACGAGTGTTTTAAATGAAACACTGATGATACTTTTGCCTGCGACCCCTGCACCTTGCCTTTTGTTTTCTGTTGACAGCGTTTGCAGTGCTGTTCCACCAAAGTGCTTACTTGTAAAGAAAATGAAACCATCCACATCCCCAGCAGCCTTAGTGCAGCAACAGAAGCCGTGGGAGATGCTGGTGACTCAGCCCCGTGGCACAGCCAGTCTCCCTGCCTGCCCAGTTATCCTGGATGACTTGAGGCTCTGGAAAGGCAGGGGACATCTCGGTGTTTTCCCTCATTCTCCCAGATTCAGCTCCCTTCCAAAGGATGGATGGTTCATCTCCTTGCACAGCCATATCACAAAGGGCTTCCTGCTCAAGGGATAAAGTTTCAGCGAAAACTTAAAAGTTCTACTCTGGACCGCAGTCTGTATGGGCTACCACTGTAAATGATAACTTGTTCAGAAAGATATTAGTTACTTGTTTACTCCTGGCAGGTAGACTACAATATAAATTTAGATTCCTCAACCTTCAGCTATTACTGCTCCTTTCCTTTGCATAACAGTCACAAAGAAAAACTGCTGCCTTCTCAGCTGCTGGGTTAAAGCAGAGGCCACTTTTCAGATCCACCCTTACTTGGTCATATAGTACCTGCAAGTCTGACTCAGACCAGGGACCTCGCCAGGAGGGCCAAAGGGCAGATCAGACCCATGGCAGGTAGGTTCAGCGGATGGACCGCACTCTAGCAGAACACAGCGGTGGTGGGTGGGCATAATTTACTCAAGAAAGGTACAGAAGGAGCCTGCCTGTCCCACTGACCATTAGTCAGGAAAGAAAATCTACTCTTCCAGCTAAGCCTGTATGAAAATCAGGTTACAAATGGACCACAACTCCAGGGTGTTCTGTTTCTGTGCTGTGACTTCCTGAAGAATTATTGCCAGAAAACTCCTGTAGTTGATGATAAGGCAAAATTGCATTCAGCTCCTTGTCATGTAAATGGGATCTGGAGGGTGTTGCTTAAAATTTATTCCACCTGTACATTTGTCACTTTAAAATTAAAATTGAGCTGGTATGAGA EMBV3_36720 CTCCTCCCCCAACTGCCTCAAACAGTAGCAACAGCCAGTCTGAGAAAGAAGATGGCACTA Gene GeneID:538742|MIER1:NM_001076913:49_cdna UTR3_Alt 3 NULL GeneID:538742 3 GENE MIER1 NULL mesoderm induction early response 1 homolog (Xenopus laevis) EMBV3_36399 CTCTGTGAGTACAGTGTCTTATATGGATGAACCTTGCCAGCCTGAAGATGCCTCTCGCCT Gene GeneID:522474|TCTEX1D1:XM_002686333:126_cdna Constitutive 0 NULL GeneID:522474 3 GENE TCTEX1D1 NULL Tctex1 domain containing 1 EMBV3_40581 ACAGTACAACATTTACAATGTTGGCTCAAGATCGGCTTTACCAGTGCACCTGGACAGGGA Variant GeneID:506530|SSR2:NM_001015533:94_cdna 221^428 2 EMBV3_13537 GeneID:506530 3 GENE SSR2 NULL signal sequence receptor, beta (translocon-associated protein beta) EMBV3_18797 GCCCAGCTTGCAGTCAGCTTCCTCAAAACATTCAGTTTTCTCCATCAGCTAAACTGCAGG Gene GeneID:512647|UBA3:NM_001075574:41_cdna Constitutive 2 NULL GeneID:512647 22 GENE UBA3 MGC140052 UBE1C ubiquitin-like modifier activating enzyme 3 EMBV3_41662 CAGGAAGATCCCATATGCCATGGAGCAACTAAGCCCCTGCACCACAACTATTGAGCCTGT Gene GeneID:538933|TBX21:XM_002695918:283_cdna UTR3_Alt 2 NULL GeneID:538933 19 GENE TBX21 NULL T-box 21 EMBV3_35490 CTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAGCCAAACGGTAAGGGATTTAGCAACAAT Gene BVV0101_031344 + 0 NULL GK000019.2:650054-1767240 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35006 TCCCTTCCCAAAAGGGGTGAGGGAGATTTTGGCAGGATCAGAAACTCGTGTGAAAACAGC Gene BVT0102_031553 + 0 NULL GK000015.2:46371547-46392653 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118459 TCONS_00238581 TCONS_00080711 TCONS_00210913 TCONS_00160959 TCONS_00219592 TCONS_00040258 TCONS_00148960 TCONS_00250203 TCONS_00133817 TCONS_00123823 TCONS_00246739 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00132066 TCONS_00232829 TCONS_00174807 TCONS_00250681 TCONS_00022895 TCONS_00078426 TCONS_00207934 TCONS_00038669 TCONS_00174805 TCONS_00170890 TCONS_00171428 TCONS_00207933 TCONS_00242416 TCONS_00205125 TCONS_00174806 TCONS_00188145 TCONS_00118487 TCONS_00125692 TCONS_00165978 TCONS_00002600 TCONS_00031759 TCONS_00000529 TCONS_00103962 34 XLOC_105290 XLOC_072622 XLOC_145248 XLOC_049595 XLOC_129423 XLOC_097852 XLOC_132911 XLOC_024074 XLOC_090838 XLOC_153146 XLOC_081223 XLOC_075375 XLOC_151107 XLOC_083377 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_153624 XLOC_013565 XLOC_047314 XLOC_126448 XLOC_022492 XLOC_103679 XLOC_103815 XLOC_149080 XLOC_124587 XLOC_114188 XLOC_072644 XLOC_077234 XLOC_100818 XLOC_000643 XLOC_018004 XLOC_000141 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_31975 GAGAACCTGGATGAAGAGGCATGTCAAAGAGAATCAAGCAAACCCAGCAGACAACCCTGC Gene BVV0102_139528 + 0 NULL GK000007.2:73672128-73708739 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214168 TCONS_00214169 TCONS_00214170 1 XLOC_130632 NonCoding TCONS_00214168 XLOC_130632 NonCoding NonCoding - 7:73678482-73688929 - TSS160271 1534 5 TCONS_00214168_7 60 0.60625814863103 2 0.853340991767184 0.00839331010026232 0.00651964620214817 0.00625514051849108 0.00382079822853292 0.0037559750105418 0.00194139462420774 0.00374297011413472 0.00215132325876173 0.00173631881630461 0.00124112192105834 1.19846263269388e-05 1.67851019687793e-05 0.000144377874977115 1.32259807273283e-86 0.00117831439398761 0 0 0 0.00532054601005172 0.00599798747102909 0.00193876458311857 4.35333170569383e-05 0 0 0.00146320254272193 0.005271886029644 0.00319960347605645 0.000185640510615078 1.41901059250313e-09 0 NM_001102497.2 B3GNT2 Bos taurus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3GNT2), mRNA. 8e-49 199 88.20 0.101694915254237 NM_015279.1 TBC1D30 Homo sapiens TBC1 domain family, member 30 (TBC1D30), mRNA. 2e-37 161 73.79 0.190352020860495 0 noncoding 0 0 0 0 -0.713593269262328 0.00329219716632535 -0.0315677507872981 0.51308293184021 ACCTTCGATGTGTTGGTGTTAGGAGGTGGAGCCTTCGGGAGGTAATTAGGTTTAGATGAGGTCAGGAGGGTAGGGCCTCCGTGATGGGATGGGTGCTCTTATAAGAGGAAGCAACACCAGAGCATCCTGTCTCAGTCATGAGAGGACGCGGTGAGAGGGAAGTCACTTGCAAGTCAGAAACAGGGTCCTCACTGAGAACCAGGTCTGCTCGTGCCTTATCTCAGACTTCCAGTCTCCAGAACTGTGAGAAAGAAATGTCTGTTGTTTAAGCCACCCCGTCTGTAGAGTTTGTTTGGCAGCCCAAGCTGATGGATACAGGAGGCTCTAAGAGGCAACAAATGAGAACCTGGATGAAGAGGCATGTCAAAGAGAATCAAGCAAACCCAGCAGACAACCCTGCATGCTTGATGAGGTTTTGAGGAAGGAAAAGTTGTTCTCCGGGCAAAGGAATGCAGAGAAAGGAAAATTCATCCTCCTTCGTTGGACTGAATGGAAAAGGGGAAAGACAATTGCTCCAGGTTCAAGGAGTGTCCAAGGCCTCATTGCTGACTGTTCTGCAGAGTGAAGGTGGAGCTCTCCAACAGGACCAAATAATGACATGAATAAATATGTAACTGCAAACAGGAGAAGGTGTTAAAAAGGCGAAATGCACAGTGCTCTAAGAGCTAAGGACAAGCCCCCTGGCCTGGTGGGGGGTGGCTTTCCTGGAGAATGAAGCCTGAGCTAAGCTTTGAGGATGTAGGAAGGGAGCATTCCAGGCAGAGGGAACTCTCCATGCTCTGGCAAGAGGATGCTTTCTGAAAAGGCCTAGGTGGAATGGTGCCGGTTGAAAGGCCAGACAAGGACCAGGTCAAAGTCTGGAGGACTTGGGATGCTTTTTGTCTTCATCCTAAGAGATTGGGATCAAAAAAGCAGATGATGTGATCAGAGGTGCATTTTGGAAAGATTAATTTGGCTGCTGAGTGGAGAATTAATCAGAGAAGAAATGGAGAGTTAGTGTTCAGTCAAAGTTAGTTAGTCCATCTCTCTAAAATGGCTACAATTTAACAAACAAACAAAAACCCCAGAAAATAACATGTGATGACAATGATACAGAGAAATTGGAACCTTTGTACATCGCTGATTGAAATGCAAAATGGTATAACCAACCCATGTGGAAAATAGATAGGCAGTTCCTCAGTGACTTAAACATAGAGTGACCATTTAACCTGACAATTCCACTCCTAGGTATATACCCCAGAGAACTGAAGACAGGGACTCAAACAAAACTTTGTATATGAATGTTCATAGCAGCATAGAGCAAAAGGTGGAAGTAACCCAAATGTACCTCAGCTGATGAATGGATAGACAAAATGTGGTACACCTGTAAGTGGAATGGTGAAAGTAAAGTCGCTCAGTCGTCTCCGACTCTGCGACCCGGTGGACTGCAGCCCACCAGGCTCCTCCATCTATGGGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAAGAGATCTTCCCAACCCAGGTATTGAACCCGGG TCONS_00214167 s 3' 6356 TCONS_00214167 s 3' 6356 EMBV3_26247 TCTTTCTCTTGGGAAAGGTTTTGGTCACTGCCTCCTGTACAGTATTACAAACCTCTGTCC Gene BVV0102_425488 + 0 NULL GK000023.2:7151202-7186800 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133826 TCONS_00133827 TCONS_00133825 TCONS_00133828 TCONS_00133824 1 XLOC_081226 NonCoding TCONS_00133827 XLOC_081226 NonCoding NonCoding - 23:7166917-7179625 - TSS99879 6534 8 TCONS_00133827_6 79 0.788031833486379 4 0.48611001810026 0 0 0 0 0 0 0 0 0 8.20641815497375e-09 1.47436909974555e-06 3.41575004207004e-10 0 0 0 0.000198387333707898 3.46984655827908e-06 0.00010186256132672 0 0 0 0.000321923319566782 3.39539015838705e-07 0.000448773128670955 0 0 0 0.000150663199431966 7.40110031438626e-05 7.56841136283625e-08 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1106 79.32 0.195286195286195 NR_026777.1 ZNF37BP Homo sapiens zinc finger protein 37B, pseudogene (ZNF37BP), 2e-56 226 71.71 0.0656565656565657 1 noncoding 0 0 0 0 -0.331307398996798 0.0931529552766269 0.0112569247645401 0.841669630288264 TCTGGCCTTGGACAAGACCTCAGTAGCAAGACCAGGAGTATTTGTATGTGAATAACCCATATTTTGGTCTTTTTACTTCCTCCGTTATGAGAAGATCTATCTTTTTGGCGACTGCTGACATAAATATGTATCAATTTGAAGGCACTGGGTTTTCAAATATTCCTTAACTTATAGACCACGACTATACAGTAAAACATGACATCACCAAGAAATTAGGTATAGTTCTGTTGAATCCTGTTCCTAAGTTTCAGGTGTACAGCACAATAATTCAGTTGAAGCTGATCGGTTTTATGAAGACCAACACCCTCGAGAACTAACACCAAAAAAGGATGTCCTTTTTACCATAGGGGATTGGAATGCAAACGTAGGAAGTCAAGAGATACCCAGAATAAAAGGCAAGTTTGGCCCTGGAGTGCAAAAAGAAACAGGGCAAAGACTAACAGAGTTTTGTCAAGAGAACACGTTGGTCATAGCAAGCACCCTTTTCCAACAACTCAAGAGACAACTCTACACATGGACATCACCAGATGGTCAATACTGACATGAGATTGATTATGTTCTTTGCAGTCAAAGATGGGGAAGCTCCATACAGTCAGCAAAAACAAGACCTGGAGCTGCCAGTTGCTCAGCTCATAAGTTCCTTATTGCAAAATTCAGGCTGAAATTGAAGAAAGTAGGAAAAACCAATAGGCCATTCAAGTATGACCTAAATCAAATCACAGTGGAGGTGATGAATAGATTCAAGGGATTAGAACTGGGAAGCAGAGTTATTGAAGAACTAAGGACAGAGGTTTGTAATACTGTACAGGAGGCAGTGACCAAAACCTTTCCCAAGAGAAAGAAACACAAGAAGGGAAAATGGTTGTCTGAGGAGGTTATACAAATAGCTAAGGAAAGAAGAGAAGTGAAAGAAAGGGAGAAAAGGAAAGATATACTCAGAGATCAGAGTTCCAGAGAATAGCAAAGAGAGATAAGAAGGCCTTCCTCAATGAACACTGTGAAGAAATAGAGGAAAACAATAGAATGGATAAAGACTAGAGATCTCTTCAAGAAAATTGGAGGTATCAAGGGAATATCTCATGCAAGGGTGGGCACCATAGACAGAAATGGTAAGGACCTTACAGAAGCAAAAGAGATTAGGAAGAGGTGGCAAGAATACATGGAAGAACTAAACAAAAAGGTCTTAATGATCTGGATAACCATGATGGTGTGGTCACTCACCTAGAACCAGACATCCTGAAGTGTGAAGTCTGGTGGACTTAGGAAGCATCACTTCAAACAACACTAGTGGAGCTGAGCTCTTTAAAATCCTGAGATGATGCTTTCCAGCTGAGCTATTTCAAATACTAAAAGATGATGCTGTTAAAGTGCTGCATTCAATATATTAGCCAATTTGGGAAACTCTGCAGGGTGACAGGACTGGAAAAGGTGTTCTCATTCCAATCCCAAAGAAGGGCAACGCCAAATAATGTTCAAGTGTGTTAATTGCTTAGTTGTGTCTGATTCTTTGCGACCCCACGGACTGTAGCCTGCCAGGCTCCTCTGTCCACAAAATTTTTCAGGCGAGAATACTAAAGTGAATATCCATTCTCTTCTCCAGGGGATTTTCCTGACCCAGGGATCGAACCCCAGTCTTCTGCATTGCAGGCAGATCCTTTACCATCTGAGGCACCAGGGAAGCCCCAAAATGTTCAAACTACTGTACAACTGTGCTCATTTCACATGCTAGCAAAATTATGCTCAAAATCCTTCAAGTTAGGCTTCAGCAGTACATGAACTGAGATATTTCAGATGTACAAGCTAGGTTTCAAAGAGCCAGAAGAACCAGAGATCAAATTGCCAACATTTGTTGGATCATGGAGAAAGCAAAAGAGTTCCAGAAAAACATCTACTTCTGCTTCGTTGACTATGCTAAAGCCTTTGACGGTGTGGATCACAATAAACCATGCAAAATTCTTAAAGAGATAGGAGTACCAGACCATCTTACCTGTTTCCTGAGAAACCTGTATGTGGACCAAGAAGCAGCAGTTAGAACCAGACATGGAGCCACTGACTGGTTCCAAACTGGGAAAGGAGTTTGACAAGGCTGTAAATTGTCACCCTGCTTATTTAACTTACATGCAGAGTAAATCATGCAAAATGCCAGGCTGGATGAATCACAATCTAGAACCAAGATTGCCAGGAGAAATAACAACCTCAGATATGCAGATGATACCACTCCAATGGCAGAAATCGAAGAGAAACTAAAGAGCCTCTTGATGAGGGTGAAAGAGGAGAGTGGAAAAAGCTGACTGGAAACTCAATATTCGAAAAACTAAAAGCATGGCATCCAGTCCCATCACTTCATGGCAAATAGATGGAGAAAAAGTGGAAACAGTGACATTTTATTTTGGGGGACTTCAAAATCATTGTGAACAACAGTGACTGCAGTTATGAAATTTGAAGACGTTGGCTCCTTGGAAGAAAAGCTATGACAAACTTAGACAGCGTATTAAAAAGCAGAGACATCACTTTGTTGACAAAAGTCTGTCTAGTCAAAGCTATGGTTTTTTCAGTAGTCATGTATGGATGTGAGAGTTGGACCATAAAGAAGGCCAAATCCTAAAGAACTGATGCTTTTGAATTGTGCTGTTGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAAATCAAACCAGTCAATGCTAAACAAAATCAACCCTGAGTATTCATTGAAAGGACTCTTGCTGAAGCTCTAATACTTTGGCAGCTGATATGAAGAGATTCATTGGAAAAGACCCTGATGCTGGGAAAAACCGAAGACAAAAGAAGAAGAGGGCGGCAGAGAATGAGATGGTTAGATAACATCACTGACTCAATGAACATGAATTTGAGCAAACTCTGGGAGGTAGTGGAGGACAGAGGAGCCTGGTGTGCTACAGTCCATGGGGTTGCAAAGAGTTGGACATGACTTACCTACTGAACAACAATAGCAAAATATATATATATATATATAAAATACCTATATATCCATCTACCTATTCTTCTTTAGATTCTCTTTCCTTGTAAGTTATATATATCACATCTGTATCCATTCATCTGTCAATGGACATTTAGGTTGCTTCCATGTCTTGGCTATTGTAAACAGTGCTGCAATGAACACTGGGGTGCAGGTATCTTTTCTCTAGTTATATGCCCAGGAATGGGATTGGAGGATCATATGGTAATTCTACTTTAAGTTTTTTAAGGAACCTCCATATTGTTCTCCATAATGGTTGTACCAAGTTACTTTCCCACCACAGTGTAGGAGGGTTCCATTTTTGCCACACCTCTCCAGCGTTTATTATTTGTAGACTTTCTGATGATGGCCATTCTGGCTGGTGTGAGGTGATACCTCACTGTACTTTTGATTTGCACCTCTCTAATAATTAATTCTGTCGAGCATTTTTTCATGTACCTATTTGCCGTCTGTATTTCTCCTTTGGAGAAACGTCTATTTAGATCTTCTGTCCAGTTTTTGATTGGGTTGGTTGATTTTTTATATTGAGCTGTATAGGCTGTTTGGGTATTTTGGAAATTAATCCCTCGTTGGTCACATTATTTACAAATGGGAGAAAATATCAATATTTGCAAATATGACCAATGAGGAATTAGCTTCCAAAATATACAAACGGTCATTGATTTCCTAAAAAAGATTTGAAACAAGTAAGGCAAAATATTAAGATTTAATAAACCTGGGTGTTCAGGCAAGGATGTTTTTTAGTCTTTATGTCTAAATATGTAACTGTTAAAATAAAATAAAAATCATTAAATGGATTTTTATTAAATGGATTTAAATCAGTAAATGGATTTTAAAAAATATTAAGTATAGGAAGAAAATCAGTTGTTACTTGCCCAAAGAACCAGATATAATTAATAATACCTGATTCCATTAGAACTAGACAGAATTAAAACTTATTCTATCATCTCTATATGGATTATGAGAATAAGAAGTTTGATCCGAAGAGTAGCATTCTATAATTGGCAGCATGAGGGATCTAGAGTACATTTTACATTGTTATAATTCATATTAAACATTTCTAACACACAGAAAACATAGAGTCATACTTATGGACTGACTTAAGTTCCACCATTCTTTTCCCTCCTCAGATGTAATTATTATCTTAAAGTCAGTGCATATCATTTCTCACCATGTTTTGAGAAATGTCCTTGTGAGATATCATAAAATATTTAAATCTGTCTAATAACACAATGAATGTTTTTTTTTGGGAATTCAAAGATTCACTAATAATATTCACTGGACTGTCATAACTATTCACAAAACACTTAAAGTTTTTAAAGGCCAAGGATGCTTTCACATTCTACTTGGTACCAAGGGCGGAATCGGTGTGGTATGTGTGAGTTACACCACGTGTGTTGAACAGATGGGCAGTCAGAGGTGAAAACCTCCCTAAGTGTTCAGGACATGGACATTAGAGAATTGGTACTTCTTTGTTTCATCTTAGAGGAAAAAACCCCAGAAGTTCCTGTGTTGAAGGTAGAACTTATTTGCTCTGCTTTATCTATCATGGCCCTGTGTCTGTGCTGGTATTTGTTCCAGGCTCCAAGAGTAGCAGTCTTTAAACTGGGGTTCTTATATTTCTGGGTACCCAGGCACAGAAAATTGTAAGGGAATCTAGATGCCCAACACCTACCTGCACACTGACTGTAACAGTACTTACTGCTCTTACTCTTTCCCACCGCCCTCTCATAATAATTTTCCTCTCACTTTACACAAGAAAGGCATACAGCTTGCCTATCCCAAGTATAACTACAGTACTTTGACCTGAGTACTAAAGGAAAGGACAATTCAAAACCTGCATCCGTGAAGCCTTCTTTCATTGCAGCGCTGTGTCTTCTTTGTCTCATGTCTTATTTCTGTTAAGGGCAATGACCCTGAGACACTTTGCTCCCCAGGAAACATCTGCAGTATCTGTAGACATTTTTGGTTGTCTCTGGGGTCGGAGATGGGTGCTCCTGGCATCTAGTGGGCAGAGGTGGGGGGATGCTACACCATACATCTTACATGGTACGGGACAGCCCCCTACAGTGAAGAATTGTTGAACCTCAGATGTCAATAATACTTGGAAAAAACACCATTTGAAGCAACATGGATGGACCTTAAGATGATCGTACTAAGTGAAGTAAGTCAGACAAAGACAAATATCATATGATACCACTTACATTGTGGAAACTAAAAAAATGATACAAACGAACTTATTTACAATACAGAATTAGACTAACAGACATAGGAAACGAACGTATGGTTACCAAAGGGTAAAGTGGTAGGGAGAGACAAATTGGGAATCTGGGATTAACAGATACATACCACTATATATAAAATAATAAGGATCTACTGCATAGTACAGGGAACTACATTCAGTATTTTATAATCTCTAATGGAAAAGAATCTGAACAAGAATATGTATGTGTGTGTATGTAACTGAATCGCTCTGCTTTACACCTGAAACATTGTAAATCAACTATTCAATTAAAAAGGATAACTAATGCTTCAGGTTGACTGGGAACCTTGCGTTAAGGGTGAGGTGGCTCTTATTAGAAAAAAAAGGAGCTTTGGCCTACCTTACAATATTCCAGAGTGATGTAATCTCTCCGTGGAGAAGCTGGGATGCTGAAAAATTTTCATCTGATGATTTTGATGCTTCCTTTCTGATAGTGATAAAGAATGAATAGCTCCTTGGCATTGGCAAGAAATACTGATCGTAGTGGTGATTTCATTCAAGTGACAAACTCAAGGCAAGGTTCCAATCCTTACCTGTTTCAAGATTAGGATATGTAATTTATAAAACCATGGAAAGAAACAGTAACTTGCGGCAAAGCAGTCTAAGCTAACAAAGACTCACTCGTATCTCACCGGTACTTCACTTGCTTAGTTCGCATGATTTCGAGGCAGTGAAGGCAAAAGTCTCAACACTCATTTCTGACTGATCGACACCACATTTTGTAGTAAAAGAAACACGTATCCGGGGTATTTTAATATATATTTTCTTAAACTTATTCAGACTCATAGGAGAAATGTTTTAACTTCTACCAAATATTACTGGATTGTAGGAATACATTTTTCTGCTTGGGTTCTGGTCTATGATAGACTGTTATTTCTCGGCTCATTTATCTATTATCATATACTGACCAGATTCACATTAATCTGATGAAAAGATCTTGTGAATTCTGCTTTACATAATGCACACAGCAATCAGGGATAGGATTTCTGTAATACACTGATGACCTAATACTTTCTTTTCATTTTGCTGTTGATTTTCATTAAGTAGATTAAATGGTGATCTTAAAAGCAGAAAGCCACTTACGAATAAATACAAAACAAAATGTTCCCAAATACAATTTTAGATGTAATACCTTAAATTTAAAAACGCAGGTTCATTTATTTTGGATTAATTTCTCCATCTTGGATGTTGCCTCACTGTTTTTTATTTGTCAAGTGAAAAATTATAAAACATCATTTTTGACAATGAAATAAAAGGATATACACATGTTAAAG TCONS_00133829 s 3' 13595 TCONS_00133829 s 3' 7176 EMBV3_39995 TCAGTCACAACTGACCCTCTTCAGGACCTCTGGGAACTGGATTTATGTGTGCTTTGGGGA Gene BVV0101_018872 + 0 NULL GK000016.2:49912374-50472097 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21381 GAACTCTGGAAGCTGTTCAAGCCATTCAGAGCATAACTCAGGCCCTCCAGAAATCCAAGG Gene GeneID:540808|FCHO2:NM_001098119:154_cdna UTR3_Alt 2 NULL GeneID:540808 20 GENE FCHO2 NULL FCH domain only 2 EMBV3_42548 CCCTCCGAGCCGCCGTACTGTTTCCCGGTGGGCGTGTGCCGCTTATGGAGGGAGTGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01185 ACCACGAACGCTGGCTGACGCTGTGTGTTCTGGCTTTAAATGATCACCTTTGTAAGTCTG Gene BVT0102_107106 - 0 NULL GK000004.2:118932267-118948750 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185509 TCONS_00185510 TCONS_00185511 TCONS_00185505 TCONS_00185513 TCONS_00185506 TCONS_00185504 TCONS_00185512 TCONS_00185508 TCONS_00185507 TCONS_00185514 1 XLOC_111606 Coding TCONS_00185514 XLOC_111606 Coding Coding LMBR1 4:118948099-119080458 = TSS137906 2900 1 TCONS_00185514_2 383 17 0.978218165883437 0.00547344045429938 0.00818749316660518 0.00487975106935244 0.00475945244413347 0.00312574614810304 0.00122166622907732 0.00305572555984437 0.00371763265356795 0.00508949077774757 0.00148072086961772 0.00067268257175627 0.000462728945885449 0.00101009425406275 0.00240046635664914 0.00193852638318917 0.00463802884095001 0.00110693567062741 0.000139906033698653 0.00386834658418391 0.00339272778078492 0.00118019851194798 0.00237012971632194 0.00235197269794184 0.00232145245384042 0.00624347819054812 0.00549999040877248 0.00357306740528581 0.000319708221968261 0.000133450892726614 5.79916319959834e-05 NM_001075786.2 LMBR1 Bos taurus limb region 1 homolog (mouse) (LMBR1), mRNA. 0.0 5223 99.97 0.999655172413793 NM_022458.3 LMBR1 Homo sapiens limb development membrane protein 1 (LMBR1), mRNA. 0.0 2107 89.82 0.538965517241379 TCONS_00185514_2 sp|Q8WVP7|LMBR1_HUMAN LMBR1_HUMAN Limb region 1 protein homolog; 0.0 683 95.25 0.986945169712794 1 coding 0 0 1 0 -0.00535880810580028 0.972436615573553 0.00332472540640842 0.94223168747144 GCGAGGCGCCAGCCCTCGGCAGACCGAGCGGCTTCTCCTCGGGCGGCGGTTGAGACGGCGGCTGTGGCAGCAGCCTGGGTTGTGGTCACCGTCCGTGTAGCGGCCGACTGTCCGCCTATTCCCGTCCCGGCCGGCGGGGCGGCCGTCCAGCCCTTCGAGCCGGTAGGCGATGGTGCGGCGGAGCGCGCGGGCGGCGAGGCGGCGGGCATGAAGGAGGATGGAAGGGCAGGACGAGGTGTCAGCGCGGGAGCAGCACTTTCACAGCCAAGTGCGGGAGTCCACGATCTGTTTCCTTATTTTTGCCATACTCTACATTGTCTCCTACTTCATCATCACAAGATACAAGAGAAAATCAGATGAACAAGAAGATGAAGATGCCATAGTCAACAGGATTTCGCTGTTCCTGAGCACCTTCACTCTGGCAGTGTCGGCTGGAGCAGTCTTGCTTCTACCCTTCTCGATAATCAGCAACGAAATCCTGCTTTCTTTTCCCCAAAACTACTATATTCAGTGGCTGAATGGCTCCCTGATTCATGGTTTGTGGAACCTTGCTTCTCTCTTTTCCAATCTTTGTTTATTTGTGTTGATGCCCTTTGCCTTTTTCTTTCTGGAATCAGAAGGTTTTGCTGGTCTGAAAAAGGGAATCCGAGCCCGAATTTTAGAAACTCTGGTCATGCTCATCCTCCTGGCCTTGCTTATTCTGGGGATCGTGTGGGTAGCCTCAGCACTCATTGACAATGACGCTGCCAGCATGGAATCTTTATATGATCTCTGGGAGTTCTACCTACCTTATTTATATTCCTGTATATCGTTGATGGGATGCTTGTTACTTCTCTTGTGCACTCCCGTCGGCCTCTCCCGCATGTTCACTGTCATGGGGCAGCTGTTGGTGAAGCCAACAATTCTTGAAGACCTGGATGAGCAAATTTATATCATTACCCTAGAGGAAGAAGCACTCCAGAGACGACTCAGTGGACTGCCTTCATCAGTGGAATATAATGTAACAGAGTTGGAGCAAGAACTTGAAAATGTAAAGATTCTGAAGAAAAAATTAGAGAGGCGCAAAAAGGCTTCAGCATGGGAAAGAAACTTGGTGTATCCTGCTGTTATGGTTCTTCTCCTCATTGAGACATCCATCTCTGTCCTCTTGGTGGCTTGTAATATTCTTTGCCTGTTGGTTGATGAAACAGCAATGCCAAAGGGAACAAGGGGGCCTGGAATAGGAAATGCTTCTCTTTCTGCTTTTGGTTTTGTGGGAGCTGCACTTGAAATCATTTTGATTTTCTATCTCATGGTGTCCTCTGTCGTCGGTTTCTACAGCCTCCGAGTTTTGGAAATTTCATTCCCAAGAAGGACGACACAACCATGACAAAGATCATTGGGAATTGTGTGTCAATCTTGGTTTTGAGCTCCGCGCTGCCTGTGATGTCAAGAACACTGGGAATCACTAGATTTGACCTGCTTGGAGACTTTGGAAGGTTTAACTGGCTGGGAAATTTCTATATTGTGCTATCCTACAATCTGCTCTTTGCTATCGTGACCACACTGTGTCTGGTCAGAAAATTCACCTCTGCTGTGCGAGAAGAGCTTTTCAAGGCCCTAGGGCTTCATAAACTGCACTTATCAGATACGCCAAGGGATTCAGACACAGCAAAGCCTTCTGCAAACGGGCATCAGAAAGCACTGTGAGGCCCCAGCGCCACTCTGCAGTCGAGAGCGAGCACCCCACACTCGTGACATTCCCGCCAGCCAGGCCATCCCGCTGACCACGGTCCATGTGTCGGGCCTGTGCCTGCCCGTGTCCCCGTCTTAGTAATTTGAGGGCTTGGCTGTCGCAGGTCGTCTCCTCTTTGTTTGCCTTTGGGTGGACCTTATAGTTTCCAGCCAAGCGCAGGCTCCTCCAGGCAGCACGTCTTCTGGGGGACATGCTTGCTTGCATCAGCTGTGCAGCCATGAGGATGTGAGAAAAGGCAACTTTAGGGCTTTCTAAGGATTCATGTAAATCTCATTATATAGTCCATTCAAAGTGTAGACACCTACATGAAAGGCATGCTTCCTTAGTCCTCAGATGGGCAGTTTCTGCAAAAAAATGGAAGTTTATAGGTGTTATTGCAGTGGCTGCATTGAAACTGTAATGGTTGCAAATGACATTTTCTACTTCCTTCAAGAAAAAAACAAAAGCATAGTTCTGACTTAAGTTACCAAATATTGACTGGAATTTGAGTTAAGGGAAAAATACACAACTCTTCTAAACCTGAGCCTTGGTAGAATGCACAGGAATCCGTCTGCTGTCCAGTGTGATAAGCTATGGCAGGATATGTTGCGTCGTCATATTTTCTGACAGTTTATGTGTAAATAATTCAATATTACCTCTCAAAACATAGTTGCCAGTGTTGAATACACTTGTAACTTAGATTTTGCCTTATAGGCTATATGTACACTCAGTTTTTTTTTTTAAACATTTTTTTCAGGAATCCCGTAATTCCCTGTAATCCTGTGTCCATTATGGAACCGTAAATCCTCTGTGGTAGAAAGCCCTTCTTTCGCCTTTGGTCACTTCTGCACATGCCAAGTTAAGCCTCAGACTTACAAAGGTGATCATTTAAAGCCAGAACACACAGCGTCAGCCAGCGTTCGTGGTGTCAGGACTGCTCTGCAGTGCATCGTGACCTCACGCTCATTCAGTTATTAAACTGTAAATAATTGTGGGGACAGGTTTTTGACCTCAAGTCCACTGAGTAAAAACTATACCGTGGTAACTCTGTGTCACCTTCGCTAGGTTAGAGCACCAGAAACTGTGCATCAGAAGCAGGAGGCGGGCCCCTCACACGCAGTTCATACCATGAGGCCTAAAGTGCGTGTGCCCACATGCACTGTGTGTGTGGCCGTAGAGTGTCTGT EMBV3_39298 GGAGACTGGCACAGCATTCTCATGGCTGCAGATAACATACAGAAGATTGAGGAAGGAGGC Gene GeneID:100300091|LOC100300091:XM_002700466:15_cdna Constitutive 0 NULL GeneID:100300091 X GENE LOC100300091 NULL similar to odorant binding protein I f EMBV3_40084 TCCTCACTCATCACAGGGGCCACCTCAGTTCTCGTTACTCACAGAAGCAGCATTACCCCT Gene GeneID:616613|C17H12orf24:NM_001035480:276_cdna Constitutive 0 NULL GeneID:616613 17 GENE C17H12orf24 C12orf24 MGC127823 chromosome 12 open reading frame 24 ortholog EMBV3_21420 AGCTGTGCCCAGGAGTGAACAACCAGCCCTACCTCACAAGAGGTGGAGGACCAGTCCCCT Variant GeneID:509188|WBP1:NM_001034346:14_cdna 244^842 2 EMBV3_09143 GeneID:509188 11 GENE WBP1 MGC128715 WW domain binding protein 1 EMBV3_23132 TTCAGTTTGCATAGAATAAGCCTCGGTTTTCCCTTCACCCACAACTGCTGCTCTCCTGCC Gene BVV0102_283353 + 0 NULL GK000019.2:25198118-25229565 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095945 TCONS_00095950 TCONS_00095951 TCONS_00095946 TCONS_00095948 TCONS_00095943 TCONS_00095944 TCONS_00095947 TCONS_00095949 1 XLOC_057841 Coding TCONS_00095943 XLOC_057841 Coding Coding ZZEF1 19:25227601-25246192 j TSS71410 4589 1 TCONS_00095943_2 553 13 0.753846153846154 3.2738603593814e-33 0.000312028613851921 0.000902875525682703 0.000171757563222745 0.000330193231087479 2.27847030265942e-72 4.34442238618781e-64 1.84840473930968e-06 9.35307473956182e-05 0.000158784704110124 2.20424764972988e-34 1.8654006409516e-66 5.49803464921065e-165 0.000139402579925086 9.53469911829306e-05 0.00176348897773637 0.00121921443084369 0.000808857921629724 0.00017367813013922 0.000309132845736071 1.69506439583991e-92 1.08148210634523e-10 1.07921377136737e-23 0.0013316012245911 0.00040793436928354 0.000571932989440611 0.000125359417728378 0.000259047987878241 0.000272390238227914 2.09072376960632e-109 XM_005220201.1 ZZEF1 PREDICTED: Bos taurus zinc finger, ZZ-type with EF-hand domain 1 (ZZEF1), transcript variant X1, mRNA. 0.0 7723 100.00 0.932882981041621 NM_015113.3 ZZEF1 Homo sapiens zinc finger, ZZ-type with EF-hand domain 1 (ZZEF1), 0.0 2836 81.35 0.640662453693615 TCONS_00095943_2 sp|O43149|ZZEF1_HUMAN ZZEF1_HUMAN Zinc finger ZZ-type and EF-hand domain-containing protein 1; 0.0 1100 94.76 0.998191681735985 0 coding 0 0 0 0 0.0248403149607039 0.838426478270334 0.00986044381984258 0.83982430256805 GTCAGAAAGAGGCTTCCTGAAGAGGTTCATGGTTTTGAAGAGACGCATGCTACCTTCCTGCAGACAGATTTGCTGAAGCTGCTGGTGAAAAAGTGCAGCAAAGGGACTGGCTTCAGTAAAACGTGGCTCCTCCGGGACCTGGAAATTTTGTCCATCATGCTGTACTCCTCAAAAAAGGAGATCAACACTTTGGCTGAGCATGGAGAGCTGGAGCTGGATGAGCGAGGGGACCAGGAGGAGGAGGTGGAGCGGTCAGTCAGCAGCCCTGGTGACCAAGAGCAGAAAAAGCTAGACCCTCTCGAGAGCCTGGATGAGCCCACCAGGATATGTTTCTTGATGGCTCATGACGCCCTCAACGCCCCTCTGCACATCCTCCGGGCCATATATGAACTGCAGATGAAGAGGACCGACTCTTTCTTCCTGGAGGTTCAGAAGAGGTTTGATGGGGACGAGCTCACCACGGACGAAAGGATCCGGACCCTGGCTCAGCGGTGGCAGCCCAGCCGGAGTCTGAGACTCGACGAGCAGAGTGCCAAGGCCGTAGATACAGACATGATCATCCTGCCCTGCCTGTCCAGGCCTGTCCGCTGCGAGCAGGCCACCGTCGAGTCGAACCCTGTGACCCAGAAGCTGATCTCCAGCACCGAAAGCGAGCTGCAGCAGAGCTACGCCAAGCAGCGGCGCAGCAAGAGCGCCGCCCTGCTGCACAAGGAGCTCAACTGCAAGAGCAAGAGGGCCGTCCGGGAATACCTCTTCCGTGTGAACGAGGCCACGGCCGTCCTGTACGCCCGCCATGTGCTGGCGTCCTTGCTTGCCGAGTGGCCTGGGCACGTGCCGGTGAGCGAGGACATCCTGGAGCTGAGCGGCCCAGCCCACATGACCTACATTCTGGACATGTTCATGCAGCTGGAGGACAGGCACCAGTGGGAGAAGATCCTGCAGAAGGTGCTTCAAGGCTGCCGGGAGAGCATGCTGGGAACCATGGCCCTGGCTGCCTGCCAGTTCATGGAGGAACCAGGAATGGAGGTGCAAGTGCGGGAGTCGAAACACCCATATAATAACAACACCAACTTCGAGGACAAAGTTCACATTCCTGGTGCCATCTACCTCTCAATCAAATTTGACCCTCAGTGCAACACAGAGGAAGGCTGTGACGAGCTAGCCATGTCCAGCAGCAGTGACTTCCAGCAGGACCGACACAATTTCAGTGGGTCTCAACAGAAGTGGAAAGATTTTGAGCTTCCAGGAGACACTCTGTATTACCGCTTCACCTCTGACATGAGCAACACCGAGTGGGGCTACAGATTCACCGTGACGGCCGGACACCTGGGGCGATTCCAGACAGGATTCGAGATCTTGAAGCAGATGCTGTCAGAAGAAAGAGTTGTGCCATACCTCCCGTTGGCCAAAATTTGGGAATGGCTGGTGGGTGTGGCCTGTCGCCAGACTGGTCATCAACGGTTGAAAGCCATCCACCTGCTTCTGAGGATCGTGCGATGCTGTACCCACAGCGACCTCTGTGACCTCACGCTGTTGAAGCCCCTGTGGCAGCTCTTTACCCAGATGGAGTACAGCCTGTTTGAGGACGTGACCCAGGCCGGCATCCTCCTGCCCCTGCATCGCGCGCTCACGGAGCTCTTCTTTGTCACCGAGAACCGTGCCCAGGAGCTCGGCCTGCTGCAGGACTACCTGCTGGCCTTAACCACTGATGACCACCTTCTCCGCTGCGCCGCGCAGGCTCTGCAGAACATTGCTGCTATCAGCCTGGCCATCAACTACCCGAACAAGGCCACCCGCCTCTGGAACGTTGAGTGTTAGCCCTTGGTGTGGTATGCATGGAACTCGCTAATCTGTCCACGAGGATCTTAGAGCAGATGCCTGCACTCATTCGGGAAGATTCCCGTGGCATCGGTGCCCGGCTCTCCTTGAGCTCCCCCCTTCCACCCCGACTAGAATGCCAAGCAGCCACGTCTCCGAGAACGTCCTGTATCACAGCGAGGCACCTGCGCGTCCCATAGCACGTGAGAATAAGCAGAGCGATGCGAAATCATTCAGAAAGCGCCAGCTGCAGGCCTTTGGGAATGTTGTTCAGAGGCTACGGCCCCTGAAGACAAGGCCACCGCCTCTCTGGGAAGGGCTCTGTCTCCATTGAACTGGAACTGCCTGCACTTGCCCTTCAGGGGACGACAGGGTCTGCCCGGACCCACGTTTCTCAGCAGGACCTTCAGCAGCAGCCTGGCCCGGGAGCTCTTCTTTCGCTTTTGCTTCTTGAGACCGGGTCGTCTAAACCAAAACCAGTGAGAGCCCGGCCCCCACCCGGTCCCCACCATTCAATACAGGACCTGCTGCCACACTGGCCTCTGCGTAGCCTCGGCCGTCCCAGAGAACTCCTTGGTGAGAAGAAGTGCCCTTGGGAACAGCCAGCAGGCCGCCACGCACGTCCACTGTGCACGGCTCCCAGCTCAGCCGCGTTGTTTTAGTTGTTGTTTTAACACGTATTTCAGTTTCCAGCTCACGTTTTTAGAGAGAACCACACTGACTCCCTTGAGAGGGCCTCGGGGGGCACGACCAGGAGATCGGTCATTCAGGGGGACACACTGCTTTGTGTGAAGGAGCAGATCTTGAAGAATACTCTTCAGCGTCTGTACCCAAAGACTCAAAGTGTTATCAGAGGAGATCTTACTTTAGAAGTCAAACAAACAAAAAAACCACACGATTGTATTTCTGCTCCACGGTCGTCATAATCCATCACGTCCGCCTCTGGGACCTCCCATGGTTATCCAGCTGTCACCTGTCTCTAGCAATAACTACATCAGTTCTAATGAATGCTGTTTTCCACTTTCCTTTCTGTGGTGGTAGTCTTGCCCTGAAGTGCTGATGATTATCCTCTTTCCAAAGCCATGCTTTGGAGTGTGAGGCTAGGTTGGCAAGTGGCCCGTGGACAAAGCCTCAGTGGGACTCGTCACTTGAAGCACCATAGAGCCAGCTGCTTCTTAAGGGTGGGGATCTGGGCCCAAGCATGTTGCCCCTCATACAAGGCCAAACCCACGGAAGGCTCATCATAGCCGGGCGGGATTGAGCAGATCCGCATGCCACGGCCCCGGAAGCCCCCCCTCTGCAGAGCCCAAGGCTGCGGGTCCTGGAATCCCCTTATTGCTGGAGCACTTCCGCATTCTGGGTCAGGAAGCTGAGGTGCTGCAACCTTCTGCAGCCCTAGACTGGATTCTCGGCCCAGCCCCAAGCGGCAGGTGGAGCCATTATGGAAGGGAGAATTCACAAGAGGCAGAGACAGAACAGGACCTGAGGCTTGGTGACCGAAAGCCCAAGAAGACCCTGACGCGGGCACAGCCCGGGCCTGGCCCAGTCTCCCGTGGTGTTGGGGTGTGAGTAGATGAGCACTGCTGGCTTGGTAGAAACCCCTTTCTCACCTTTTGCTTTGCTGGCATCCCCAAAGAAGGTCCCAGGCTCCATACCGCCCAGCCCCAGGTGGCTGTCTCCCAGTGACGAGGGAAATCAGAGAGATCACCGTGCTTTGGAGGAGAGGTCCCTGCCATAGCCTCGGGCTCACTGATGCAGAGATGGTGTACTCGCTGCTTACCCTCACCATGCTCTCCCCTAACCTCCCAGACTGGCAGCAGCTGCAGGGGGTCATACCCCTCATGGCAGCAGCCATTGGCTTTGCCCTCCATCCTCCCACTAGGGAGATAAAAGTGTAAATAAAACGCTGAACTCCTCAGAGCTTCTCTGTGTACACCGCCCCTGCTATTCTGTTCTCTCTGTATTCAGTTTGCATAGAATAAGCCTCGGTTTTCCCTTCACCCACAACTGCTGCTCTCCTGCCAGCGCCCTGCCTCCCATCGCCTCTGCTACCAGCCACTGGGTGGCGCTGCTGAGCCAGGCCCACTCCCCTGGTCCACAGCCGGGCCAGCAGTATCCGAAAGTGATTTCCATCCAGACCGACATCCCTCTGATCCTTCCTAGGAGGCGGGACTGCCTGGAGTGAGGTGGGACTGGCAGGAATGAAGGTGTTGTGGAAACATGTGCCTAATCTATAAAGAAATCTGTTCCAAACCATGTATATTGTACAGACAGACGCTGTTCCTTACAGGGAGTGACTTATTTTCATCATCGTTTTTAATTTGTTTTCTTACGGGTTTACGATTTTGAATTTTTCTTATTTGGTTGAAAGAAAGAATTTTGATTATATCAGCTGAGTAAGTTCAGCCTGTAAAAAGGATGTTAAGTTGTGGGTAAAATATGCAAATGAAGAGAAATATATTGTACAAATTCTATATAAAAAGGTACTCTTGTGTGTGGGCTTTTCTTATTTTCCCTTTCCTTGCCTCCTTCTGCCTTGCTTATGAAGATGATGCTTGGAGTTTCTACCAAGTCCGTACTGATGGAATTTCTAGAATCCCAAGGCCTTGGGGTAGGAAGGAATCAGAAAGGTTCTTAGCTCCCACCCCCCCTCCAGTAGCTCCTCCTGCCCCTCCCCTGGGTCTGTGCTCTGGGGTCTTATCCTCAGACCCTGCTCCCTGGGCCTGTCACTGTGCACAGCCACTCAGAGGTCTGCATGCACACACACATAC EMBV3_10214 CAATTACGAGGAGATCACCAAGTGGTACCTGGGCTGGAAGTCCATGTTCTCGGACCAAGT Gene GeneID:509349|TFIP11:NM_001046030:50_cdna Constitutive 0 NULL GeneID:509349 17 GENE TFIP11 MGC137252 STIP tuftelin interacting protein 11 EMBV3_29392 GTGCCGCCATGGGTGTTCTTACAGGGAACGAGCCTCCTATCTTTACATAGTCACACTTTG Gene GeneID:523664|BTAF1:XR_084654:14_cdna Constitutive 0 NULL GeneID:523664 26 PSEUDO BTAF1 NULL similar to TATA-binding protein-associated factor 172 (ATP-dependent helicase BTAF1) (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B-TFIID transcription factor-associated 170 kDa subunit) EMBV3_36185 CCAGTGGGAATTTGGTCTTCATAGGGGGTTGATCTGCTTGGAAACCATTGTATTTTGTAG Gene BVT0102_056759 + 0 NULL GK000024.2:50955056-51013464 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03735 TTCCACCTGACCTCAGACTGCCTTTGACTCCATCCTGTCACTGAACTGCTTTTACTCCTG Gene GeneID:512867|GIMAP1:NM_001083677:646_cdna Constitutive 0 NULL GeneID:512867 4 GENE GIMAP1 MGC148396 GTPase, IMAP family member 1 EMBV3_30014 GGTAACCATACCCTATTCCATAACCCTCATGTGAACCCGCTTCCAACCGGCTATGAAGAC Gene GeneID:282199|COX6A1:NM_001077831:15_cdna Constitutive 2 NULL GeneID:282199 17 GENE COX6A1 VIA_L cytochrome c oxidase subunit VIa polypeptide 1 EMBV3_36239 TGAGGTTCTCCGTCCTCACGTCTGGGTGAGCCTCAGATTTCTAGCGCCTGTATTTCTGAG Gene BVV0102_098307 + 0 NULL GK000014.2:22350057-22477982 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051522 1 XLOC_031212 NonCoding TCONS_00051522 XLOC_031212 NonCoding NonCoding - 14:22473673-22474166 - TSS38397 493 1 TCONS_00051522_1 51 1 0 0.000155412343565804 0.000212613823456278 3.75415611584696e-05 5.05050134631147e-05 6.81807031289713e-05 5.0135174059592e-11 1.63174133953852e-05 9.56225847354289e-49 0 0 0 0 0 0 0 0 0 0 5.90869873066665e-16 0 0 0 0 0 4.21611659075038e-05 0 0 0 0 0 0 noncoding 0 0 0 0 -0.217787620943005 0.10646139944043 -0.000575282506831698 0.991746420583831 GGGAGGGACCGTCAAGGTAAGGTTGGGTCTTGGGTTCTAACCCTCCTCCCACCTGTGAGGTGGAAGGAGAGGATAATAAGGTGAAAAGAGCACCAAAGTGGGTGAGAATTCCCCTCTGGATGGAAGAGATCCTTCTTCTCTCCTTTTCCCTCCATGGATTTCCCACTCCATGAGTGTGAAGAGCCCCCACAGACACACACACTCACTCCCGGTGAAACGTGGACAGAACAAAGGTAAGTGCTACCCTAGTTCCCTGGGGACCATTCCCCTCACCTGCCCTCTTCTGACCCTGAGGGATCCCTCCTCTCAGAAATACAGGCGCTAGAAATCTGAGGCTCACCCAGACGTGAGGACGGAGAACCTCAGATGAGAGGAGCCTCTGTGTAGACGGCCAGTGTTTCCTGGACAAGTGGGGACCAGCAAGTGACGGGGGGGCCAGCATGGGGACAATCTGCCCAGCAGGGGGCAGGGGCATCACCCCTAAAACCAGCTG TCONS_00051519 TCONS_00051520 s 3' 123618 TCONS_00051519 TCONS_00051520 s 3' 123618 EMBV3_18701 AAGAGGTCCCGGACGGCCTACACCCGGCAGCAAGTCCTAGAACTGGAAAAAGAATTTCAT Gene GeneID:513306|HOXD4:NM_001101087:228_cdna Constitutive 0 NULL GeneID:513306 2 GENE HOXD4 NULL homeobox D4 EMBV3_41392 GAAGGTTTTCATAGGAAGTACGGTGCTCGAGTGGCAAGTGGCCAAGAGGAAATACCCTAC Gene GeneID:786270|LOC786270:XM_002689761:12_cdna Constitutive 0 NULL GeneID:786270 8 GENE LOC786270 NULL similar to zygote arrest 1-like protein EMBV3_39681 CAGAGGATCTCCTTAGTGAAGGGAGTCGCGGTTCTCAATATCTCTGTTGCCCCAATTTTG Gene GeneID:788220|LOC788220:XM_002687614:732_cdna Constitutive 0 NULL GeneID:788220 5 GENE LOC788220 NULL similar to olfactory receptor 822 EMBV3_09456 CCGTTTTAACCGTCTAAGCACCCCATGTGTTACCTGATGTGGCTGAGATTCTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_35486 TCACTGACACCATCATTGTCCGCATCGGGGTGGTAGCTATGGTGCGAGGTTCCATTCTTA Gene GeneID:531135|LOC531135:XM_002693250:528_cdna Constitutive 0 NULL GeneID:531135 15 GENE LOC531135 NULL similar to cOR52P3 olfactory receptor family 52 subfamily P-like EMBV3_13782 GACAGCCTGCTTGCGAATTTACTCTGCAGAATGCAAAATCTTTTTCTTCTTTCTGTTGAG Gene GeneID:510801|CA1:NM_001075466:33_cdna Constitutive 0 NULL GeneID:510801 14 GENE CA1 NULL carbonic anhydrase I EMBV3_09322 GCATGTAAAATGCAGTCCAGAATAAGTGCTGTTTGAGATGTGATACTGGTACCACTGGAA Gene GeneID:539487|NEUROD1:NM_001103288:38_cdna UTR3_Alt 1 NULL GeneID:539487 2 GENE NEUROD1 MGC166032 neurogenic differentiation 1 EMBV3_05216 GGAGCAGTCCCTACTGATAAACATTTTCTTTCCAGTCTATTTCAGTTGCAGATATCGCTG Gene GeneID:527379|ZMYM1:XM_002686484:564_cdna Constitutive 2 NULL GeneID:527379 3 GENE ZMYM1 MGC127968 ZNF262 zinc finger, MYM-type 1 EMBV3_04346 TATCTCTTTGCCAGTACCGGGTTCTTTCTCTCAGGCCTCTAGCCCTGTTTCTGCAGCATT Gene GeneID:614042|CDC42SE1:NM_001035112:151_cdna Constitutive 2 NULL GeneID:614042 3 GENE CDC42SE1 MGC127300 CDC42 small effector 1 EMBV3_33770 CATCGTGGAAATGTATCCATCACAGAGAGCCACCCAGAGGAAGAGGATTGATGTCCTTGC Gene GeneID:540722|ADAMTS6:XM_002696296:39_cdna Constitutive 0 NULL GeneID:540722 20 GENE ADAMTS6 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 6 EMBV3_27423 ATGATTGCTCTGCTTATACTGGTTGGACAGGTAGTCAATGCTATCATTGAATCGGGCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32237 CAGAAAGCTCTGGATGGGGAATTCCCTGGTCGTCCAGACGTTAAAACTCTCATGACCAAC Gene BVV0101_068673 + 0 NULL GK000003.2:102894489-102923771 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05899 TTCGTCTGACTTGGTCCCAGTCTTGTCACCACCTGTGCAACAGACCTGCAGACCAAGGCT Variant GeneID:521254|BPNT1:NM_001034539:56_cdna 114^241 1 EMBV3_14479 GeneID:521254 16 GENE BPNT1 MGC126947 3'(2'), 5'-bisphosphate nucleotidase 1 EMBV3_18721 GGAAAACTTCCAGCAGTTGGATTTGGCAGGAAATTGTGTAAGCAGCGATGGATGGCTTGC Gene GeneID:512480|NLRC4:XM_002691218:44_cdna Constitutive 0 NULL GeneID:512480 11 GENE NLRC4 NULL NLR family, CARD domain containing 4 EMBV3_16347 GGGGTGAACACTCTTATCTTCTATGGAAACGTGGTAAGGAAGTCACACTTTCAATACCGC Gene BVT0102_125304 + 0 NULL GK000010.2:933225-979711 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09096 AGACCTACAGCCGAAATCTGCCTTTCTCATTCTTGGCTACAGCAGTGGGACTTTGGAAAC Gene GeneID:511373|STK17B:NM_001038080:94_cdna Constitutive 0 NULL GeneID:511373 2 GENE STK17B MGC134048 serine/threonine kinase 17b EMBV3_36705 CCCACCTGCTCTACTTCTTCTACGACATCATTGACTGCTTCTCCATGCTCCACTGTGTTG Gene GeneID:509554|GPR182:XM_002687413:138_cdna Constitutive 0 NULL GeneID:509554 5 GENE GPR182 NULL G protein-coupled receptor 182 EMBV3_00002 GTAGTGCTGAAGTTTGCATGTTGGTACTAGTGATCATTTTTTGTTTTTGCCTTTCTGCAG Gene GeneID:282179|CHRNB1:NM_174516:27_cdna Constitutive 0 NULL GeneID:282179 19 GENE CHRNB1 NULL cholinergic receptor, nicotinic, beta 1 (muscle) EMBV3_03187 AGTGTGACACCACCGAAACGTCTGGTCTTACTTAGGTTGCCAAGAAGAGGCAAGGGTGTA Gene GeneID:507081|C8H9orf6:NM_001045956:7_cdna Constitutive 0 NULL GeneID:507081 8 GENE C8H9orf6 C9orf6 MGC138004 chromosome 9 open reading frame 6 ortholog EMBV3_07162 GGGCCAGTCTGGGGCAGGGGTAGAGAAGCTGGCAGCCCCCTTTTATAAATATTATACATA Gene GeneID:326576|SLC38A3:NM_001040486:70_cdna Constitutive 0 NULL GeneID:326576 22 GENE SLC38A3 MGC128790 solute carrier family 38, member 3 EMBV3_29019 GTACTATTCCTAACCCGAATGAAATTAGCCTTTGCCTTATTCTGTGCATGGGTAAGTAAC Gene GeneID:100337005|LOC100337005:XM_002685669:443_cdna Constitutive 0 NULL GeneID:100337005 2 GENE LOC100337005 NULL delta-notch-like EGF repeat-containing transmembrane-like EMBV3_22454 CCATGGAGCTTTGGTCCCTGAACAACCAGTGAACCCTTTTCTTTCCCAACCACATCAGCC Gene GeneID:513014|ZNF391:NM_001100352:16_cdna Constitutive 0 NULL GeneID:513014 23 GENE ZNF391 NULL zinc finger protein 391 EMBV3_29653 AGAACTAAACCAGTGTGTAATCCCAGGAGTCCAGCTCAGATCCTTGTACCTGCTTGGGAG Gene GeneID:505401|TADA2A:NM_001034244:212_cdna Constitutive 1 NULL GeneID:505401 19 GENE TADA2A MGC127042 TADA2L transcriptional adaptor 2A EMBV3_26268 AACCGGGGCTGCCGCGGGGAAGAACTACTGGATATTAGTGCTGAATCACCTGGCTCGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08620 TGGTTCAAACTGCTAAAGTTATACAGCATCACAGAGCAAATAAAACAGCCCCCAAAGTAC Gene BVV0102_442276 + 0 NULL GK000024.2:20356567-20573847 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07123 CTGGTGGTTATCAACACGCAGGAGGAGCAGCTTCTGGGATGCAGGGGAGCCCAACAACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34948 CTCCGCAGAACCAGGTGAAGATGGTGATACACTGTGGATTGCAAAACTGGTTCCAACCTC Gene BVV0102_203817 + 0 NULL GK000020.2:35674521-35917478 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40290 AGGCTAAATGATACAGAAGAGTGTATCAGAGAGCTGGAAGACAGTAGTAACTGCTGCTGA Gene BVT0101_019982 + 0 NULL GK000005.2:47705860-47713412 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191762 TCONS_00191764 TCONS_00191757 TCONS_00191763 TCONS_00191761 TCONS_00191756 TCONS_00191755 TCONS_00191765 TCONS_00191766 TCONS_00191758 1 XLOC_117015 Coding TCONS_00191763 XLOC_117015 Coding Coding GRIP1 5:47690169-47711308 j TSS143645 5942 3 TCONS_00191763_8 141 0.254291484348704 3 0.719036805752673 0.000370366307712413 7.59099635501272e-23 0.000673965225633861 0.000529549856997736 0.000984928057727915 8.45925669854818e-06 2.53990696815987e-05 5.59888233527689e-05 0.000966073049107304 4.50541053297626e-05 3.14948524240299e-18 6.62609541290363e-13 3.01801058543283e-05 0.000661853979198199 2.52738128693747e-18 1.99787127318413e-51 6.53724239533783e-13 3.85158194073893e-09 0.000825151387038191 0.000807733632520262 0.000625455478435696 6.72664252771436e-13 1.25594843242374e-13 1.96580514652901e-17 0.000224920893187461 3.04185233923912e-24 1.37813465015855e-25 8.1392612673084e-13 1.13074539588583e-12 1.69305948885202e-14 XM_002687647.2 GRIP1 PREDICTED: Bos taurus glutamate receptor interacting protein 1 (GRIP1), partial mRNA. 0.0 3855 100.00 0.359474924267923 XM_005268754.1 GRIP1 PREDICTED: Homo sapiens glutamate receptor interacting protein 1 (GRIP1), transcript variant X1, mRNA. 0.0 2439 87.32 0.332043083136991 TCONS_00191763_1 sp|Q9Y3R0|GRIP1_HUMAN GRIP1_HUMAN Glutamate receptor-interacting protein 1; 2e-69 227 92.24 0.991379310344828 1 noncoding 0 0 1 1 -0.0250125623294754 0.807962241976025 0.0243166142571198 0.71372176665052 CGATCAGAGCCTGAAGGGAACATAGAGGTTTCGCAACCTTTCCACAAAACCTTCCCCAAAGTATCTCTTCCATCTGGCGTTCCTGAATTATACCATTTTATAATAAACTGGTGATCTGGTGACCCTGTACAAGGGCTCTGACATGGAGGACTTCGGATTCAGTGTAGCAGATGGCTTGCTGGAGAAAGGAGTCTATGTCAAAAATATTCGCCCAGCTGGGCCAGGAGATCTTGGTGGGCTAAAGCCCTACGATAGGCTCTTACAGGTTAATCATGTCCGAACGAGAGACTTTGACTGCTGCCTCGTCGTACCCCTCATAGCGGAATCTGGTAATAAGCTGGACCTGGTTATTAGTAGAAACCCCCTGGCTTCACAGAAGTCCTTAGAACACACTCTACCAGGAGGAGAATGGAGTGAACAGAACAGTGCTTTTTTCCAACAGCCGAGCCACGGTGGTAATTTGGAGATACGAGAACCCACTAATACACTATAGCAACGCTTCTTATAAAGTGGGACAAAAGACAATATCTACATGGTGCTAAAAAACAAATCCCTTTAAGATTTCTGTGACATCTGAAGCACAGATAATCGCGTGGCATTAACCGCAAGCACAGGGGTCTTTTAAATCTCTCATGGCTCATGTTCACTTCCCTTTTCAAGTTGAAGAGGCTTCTTTGTTAGTGATCACTATGGTATATGACAGGCAATCCCCTGCCAAATCCAATGGTAGAGAAAAAGAAAAACAGGCCACCCCTCTCTACAGTTAACATCAGAGGACATTTTTTTCACAAGTCCATCTCCCTGTTCCTTTTTAAAAAGAGAAATGTCTGTTTGAAAATATTCTCTAAAATAATTTCCTTAATTCACTTTGAAATCAGTTTCTTACTACAAAGTTATTCATGTTAAGAATTTAACTGACAAGGCTTTTCATAAAGCTGGCTCTGCTAGAACTAGCCTAGTGAACTGCTGGGACTGCTGCTATGGGAGGGGTACAGGTATAAATTATCTTACGTTTCAGCAACGGTGCACGCAGGAGACCATAATAGGTGGTGGTAAATGTTTTGCCCAAGTATAGGAATGATTTTAACTAAGATGTATGCTATTCCCTATGCAACAAATGATCAAACAGGATATGTCTTGTGACCTGTTTTTTTGGTTTTTTTTTTTTTAAGGACACATTTTTTTAATAGCTGAAAACTCTCTGGTAATGAATTAGGGTGTTTAGTAACACTGAGAATTAGTTAAATTATCTTATTTTTAAAATTCAAGACTAAGAATTTAAGAGAGAATGAAGAGTCTATTAAAATGAGGTTTATCTTAAGGATAGGCAAATGAAACTCATATTGCTTGACATGTTTTGAAAACTGGTTATACTGAGGGGTGTACAGCACATGTACGTAAATGACTCTGGACTGTCTTTTGTTCTGAGCCATGCCACTGACTGAAATTGTAAATACATTTTCACGAAATGCATTGCCAATTATTACCATCCCCCAAAGCAATAAACTGTGACGGTTGCTTTTAATGTCTGTCAGCAACTGTTTTCATTTGTTCAGATATTTTGAATAGTTACACTAATAACTGTTATTTGGTGAATATTAAAAAATAATAGATCTGTATATTGATTGTAGAATCTCCATACTGAAAAATTATTTTCCAAACATTTTTATTTTGGTCAATAATTAAAACAACTGCTTAAGCAAAGCATCTGAACACTGTGTCCTTTGTTTAAGGAAAAAGTTCACCTTTTGTTTCTGTGCAAAGAAATATATTATTTCAATCATATTTCAGAACCGCCAGGGCAAGAAAGTATAAAGCAGAATCATGTTAAGAAAAAGATCATGAGTCACTTAAATATGTATTTTTATTTGTAACAAACAAGTATTAAACTGTAAAGTATTTTTGTACAAATTTAATACTTTAATAGCATGGTATTTATCGTCTATGTATGGTTTTGGGGAATTCAAAATTGTTGCAAATATTTGTATGGGAATAAAAAACCCTCTACCAAATGGAATAAACAGTGATTTTAAAAAGCCAAAAAAAAAAAAATGACCTTTTTTGGTGCTTTGGATATATTTTAGTGTTCTATACTGAGCCCTACACAACACTAATGGTTGCATAATTTTCTAAAGGAGGAAGGTTTTGCCATAAACTTGAAAAGCACCATGGAAGAGAAGAGCTATGGTTTTGATATTTGATCTGGGCTTGAATTCCAGCTCTGATACTCACTGGGGGTATGAAATTTACTTTCTTGAGTCAGTCTTCCCACCTGTGATACTGAAGGTCATATCTACATTCCAATACTTCCATGAAGAGAGGTGTGACACATATGTAAAAATGCTGGAACAGCTGGCAAACAGGAACACCTCTAAGACTAATGATACACTGATATTAGGTGACAAAGCTTGATCTTGAGTCTAACTTAAGGATCATATCTACCCCCTGAGAACACTGTATGTACTCCATAAAATATATTTTCAAAAACTACTAGCATGATTAAAATTTATATATAAAAAAAAAGAAAACTATACCTTATAGTCCCAATGTTTTCATTTTTGCAAGTTGCCTAGCAGGCTTTGTAAATTCACGGGCACAAGGCAGGATGTGCATTCTTGCCACGTCTACTTAACAGGGTACCAGAGGTTCTAGCCAGGGCAGCATCACCAGGAAACGAAATAAAAGGCAACTAAATTGGAAAGAAGTAAAACAAACTCTACTTGCAGATGATACAATCTTGTATATACCAAAATCTAAGGAATCTGCTAAAAAACCTATTCAAATAAATGAGTTTTAGCAAGGTTGCAAGATACAAGATCAATATATAAAAATCAACTGAATTTCCATACAGTATTAATGAACAAAAATAAAATAATTATATTCTCAAAGGATCAAAAATAAAATACTTAGGAATACATTTAATGAAAGTACAGAGTAGGTGTGGAAGACGGCAGAGTAAAGACCCTGCACTCACCTTGTCTCACAAGCACCAAAGTTACAACTATCTGCAGAACAACCATTGACGGAAAAAGCCTAGAACCTACCAGAAGAGATCAGAAGGAACCATCACAAGAAAGGAGGAGAGGATCTGCAGTATAATCAAATCCAGTGACCCGTGAACTGGAGAATAATTATAATGGAAGGAACCGTCACAAGAAAGGAGGAGAGGATCTGCAATATAATCAAATCCAGTGACCCGTGAACTGGAGAATAATTATAATGCAGAGGTTCTCCCACAAGAATGAAAGTTCTTATCCCCCACATAAGGCTCCCCAGCCCAGGCGTCCAGCACTGGGAAGACAAGCCCACAGAGCATTTGGCTTTGAAGGCCAGCAGGGTGGTACTGAGGGCTTCCCTGGTGGCTCAGAGGTAAAGAATCCGCCTGCCTATTCAAGAGACACGGTTTCAATCCCCGGGTCAGAAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTTGTAAATCCCATGAACAGAACAGCCTGGCAGGCTACAGTCCATGGGGTCGAAAGAGTCAGACACGACTTAGCAACTAAACAACAAGGCTGGAACTGCAGAAGCCTCACAGGACTGGGAAATAGAGACTTCACTCTCAAAGGGTACACACAAAATCTCACACACACCAGGATCTAGGGTGAAAGCAGTAATCTGATAGGAGCCTGAGCCAGACCTACTGCTGGTTCTATAGACTCCTGAAGAGGTGAGCTGTGGACACAGACACTGGTGCCAGACATTGGGGAACATTCAACTGCATGAACACTCCTGGGAGCTGATGTGCTGGATCATCAGCACCAAGACTTGGCCCTACCCAACAGACTACAGGCTCCAGTGCTGGGGACACCTCGGGCCAAGAAACTAGCTGGGCAGGGACACAGCACAGTCTGCCTAAAGACACCCTGACTCCACCTCTAGACATATACCTAGACATGGCCCTGCACACCAAGAGGCAGTATTGGCCTCCATACACCAGTGGGCAGGCATCAGCCCTTCCTGACAGGAAGCCCACACAAGCCTCTAGACCAGCGCTCCCCAGTCTTTCTCTCACCAGGGACAGGTTTCACAGAAGACAATTTTTTCACAGACGGGGGCGGGTTTGAGATGACTCACGCACATTACATTTATTATGCTGCTGCTGATCTGACTGGAAGTGGAGCCCAGGCAGTAATTCAACTGATGGGGAGCAGCTATAAATACAGGGGAAGCTTTGCTCGCTCACCCACCACTCACCTCCTGCTGTGTGGCCCGATTCCTAATAGGCCACAAACTGGTGCTCTAGACCAGCCTCACCCACCAGGGTGCAGACACCAAAAAGAAGACAACTATGATCCTGCAACACAGGCCAGACTCCACCCTGGGACTAGCTGGGCCCTCGTCCTGCTCACTAGCAGGCAAATGCAACCTTCCAGACAGTCTGGACCCCATGATCAACAGTCAGGAATGGGCCCGCCAACAACAATCTAAAATGCATTCTAGGATCTCTGGGCCCTGCAGCCAAACTCCAGAAAACATCCCTTAACTGCTAGTAGCTTGGCACTACTCCCAGGATCTGGCTTCACCTGTCAGTGGGCATCTATAGCCCCAGAGTCTTTGGGATCCTGACTCAGCCCACCAGTGAGCCAGCACTAGCCTCGGGGCCCCCTAGGGTTCCGAGACCAGCCACTCTGTGACCAAGCCCAGCTAAAGAGCAGCCAGCAGCATACACACAAGGCAAGGCCAGGCAAACAACCAGACTAGGAACCAACCAAGCCTACCATACCACCCACGTAGCCAGCCACAAAAGAAAGATTCATGCAACCCTCTAAAGGAGCCCCAAGAGAATACAGCTTCAGTGACAAGGGAGTGCACTGCTGGGACACACAGGACATCTACACATGCCACTTCTCCAAGAACCTACCACGTGCATAAAAATATAAATAGCAACAGACAAAACAAGGCCTCAGAGGACTATGTTCAAGACAAAGTAACAAGATAAAACTCCAGAATAAGAGCTAGGTGGAGATAGGTGATCTACTCAAGAAACAGTGAAGAGTAACAATTGTGTAAAGATGATTGAAGAACTTGGGAGAAGAATGGATGCACAGAGCAAGAAGTTACTTTTTAACTAAGAATTAGAAAATATAATGAAAAACCAGAGATGAATATAACAACTAACATGAAAAACACACTAGAAAGAATCAATAATAGGCTAAATGATACAGAAGAGTGTATCAGAGAGCTGGAAGACAGTAGTAACTGCTGCTGATCAGAAAAAAGAAAGAAAAAAAGCAAGGACAGTTTAAGACAGCTCTGGGACAACATTAAACACAATAATATTCACATTATAGGGGTGCCAGAAGGAGAAGAGAGAAAGGACTTGAAGAAAATATTTGAAGAGAGAAAAGCTGAAAACCTTCCTAACCTGGGGAAGGAAACAGTCAACCCATATCCAGGAAACACAAAGCTTCATACAGGATTAACCCAAAGAGAACCAAACCCACCAAGACACACTGTACTCAAAATGCCAAAAATTAAAGAATGAATACTAAAAGCAGCAAGGGAAAAGCAACAAATAATATACAGGGGAATTCCCATAAGCCTGTATGCTGATTTTTCAGCAGAAACTACAGGCTGGAAGGGAGTAGTAGAATATATGGAAAGTGATAAAAGAATCTACAACCAAGAATATCCTACCCAGCAAGGTTCTCATCAAGATTTGATGGACAAATCAAAAACTTCACAGACAAGCAAAAGATAAAAGAATTCAGCACCAACAAAACTAGCTTCACTACAAATGTTAATGGAACTTCTCTAGGCAAGAAAGAAAAGGCCAGAACCAGAAACAAGAAAATTATGGAGGGAAACAATCTACCAGTAAAGGCAAATAAATACACAGTAAAGGTAGGAGATTATCCACATACAAAGCTAGTAGAGATATTAAAAGATAAAAACAG EMBV3_22674 TTGGGGGAGAATAGCCAGATTTTACTTTGAAGCCCCCAGAAGCTTTTCAGTGGTCCTCGG Gene GeneID:513550|FAM18B:NM_001046152:24_cdna Constitutive 3 NULL GeneID:513550 19 GENE FAM18B MGC137873 family with sequence similarity 18, member B EMBV3_39822 GTCCGATGGAATGCCTGTTATGCGATGGGAAATGTATTTAAAAATCCTGCTCTTCCCCTC Gene GeneID:515657|HEATR6:XM_002695621:15_cdna UTR3_Alt 2 NULL GeneID:515657 19 GENE HEATR6 NULL HEAT repeat containing 6 EMBV3_22164 CCTTGGAAGAAGGGATTCCCTTTGATGTTTGGTCTCCTACTTAGGTAATACCTATTGCAG Gene GeneID:510494|ST13:NM_001101926:153_cdna UTR3_Alt 2 NULL GeneID:510494 5 GENE ST13 MGC165934 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) EMBV3_28297 CAGAAACATCTAAAGCTAATGTTGGAGAAGGGGGAAGCATGCGTAAAAGCAGTTGGGTTG Gene GeneID:514697|RFK:XM_002689667:11_cdna UTR3_Alt 2 NULL GeneID:514697 8 GENE RFK NULL riboflavin kinase EMBV3_35759 GCCATCCTTGGAGCATCGCTATGAGGCGTGGTGGGCTTTAGTTTGGTCTAGTTTCTGAAG Gene GeneID:614496|R3HCC1:XM_002689780:20_cdna Constitutive 0 NULL GeneID:614496 8 GENE R3HCC1 NULL R3H domain and coiled-coil containing 1 EMBV3_09925 GTCAGCCATCCATGTCCACACCCGCCCACTTCTGGGCTCTGACCATGTTCTTGACAGCAT Gene BVT0102_066317 + 0 NULL GK000013.2:60107181-60109035 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045802 TCONS_00045803 1 XLOC_026531 Coding TCONS_00045802 XLOC_026531 Coding Coding C13H20orf108 13:60107531-60118983 j TSS33350 4254 5 TCONS_00045802_2 131 0.0270333803479079 3 0.628766046633482 0.000273534846279522 0.000479160286697209 0.000138799515279275 0.000171305935615917 0.000274527108040768 1.78673510112449e-05 0.000141296139043435 0.000510573060353235 0.000743222490179107 8.83628841933479e-06 1.77448766569609e-11 3.41922774972916e-11 5.73165741556164e-05 1.90753603486477e-05 0.000101505753366398 0.000263229588513937 3.50585084634083e-05 2.19343918324396e-10 0.0015162896276532 0.000308370007694895 0.000400826463093822 1.05163234977926e-05 1.32936719748504e-05 1.13005411973667e-10 9.99146250593449e-06 7.64727087050521e-05 5.09190736213617e-11 3.45197262171176e-05 6.96990328715191e-06 6.28253240530482e-11 NM_001080278.2 FAM210B Bos taurus family with sequence similarity 210, member B (FAM210B), 0.0 4850 99.85 0.634226610249177 NM_080821.2 FAM210B Homo sapiens family with sequence similarity 210, member B (FAM210B), mRNA. 3e-167 594 76.67 0.188998589562764 TCONS_00045802_2 sp|Q96KR6|F210B_HUMAN F210B_HUMAN Protein FAM210B; 3e-76 229 87.69 0.984732824427481 1 coding 0 0 0 0 -1.69328892418048 0.0136726176642753 0.0190997271584453 0.711141464621787 TGAAACGCAGGGTTACTTCTTTGTGTATATCTTCACTTGCCTTCTATGCATGGACCCCAGCAAAATCACGGTGACCACAGGCAGCAATATCAAGGGCACAGAGGAGGAAAAGCTAAGCAAGTCGCAGCAGCTGAAAAAGATTTTTCAAGAATATGGTGCCGTGGCAGTGTCACTGCACATTGGAATCTCATTAATCTCCTTGGGAATGTTTTACATGGTTATTTCAAGTGGTGTGGACATGTCAGCCGTCCTGCTTAAACTCGGCTTTAAAGAGTCACTGGTCCAGTCGAAAATGGCGGCCGGCACAAGCACCTTTGTGGTGGCCTACGCCATCCACAAGCTGTTCGCGCCCGTGAGGATCAGTATTACCTTAGTTTCTGTGCCCTTGATTGTCAGATACTTTCGGAAAGTGGGAATTTTTAAACCTCCAGCGGCAAAGCCTTGATGAACTCTTCAACTGTGGGCCTGAAAACCTATTTCTTGTAAATGACACATGCTAGATTGGTTTTAGGATGTAGGTTTTGTGGTGGGTGGGTAGCAGGGGCTAATTGTTGCATTCTCACAAATAGGATTTACTTTTGCCAGCAAAAATTCAGGGTTTCAAATCATTGTAGTTTTTCCACTTTAAAGTTTGGGTAATGCTATTCATCACAGGGCTTGTCTGCATACTCATCAGCAGAACACCACCAATGAGTTGTCATGTCAGACAAAACTGTCAGCCAGGAAGTGTTCCTTCCAGAAGACCATTGGTGAGGGTCTGCCTGCAAGAGCCTCAGGGGTTCATCTTTGCTCAAATTCTTGAAGGGTAGTGATTCATTAAGCTGATTTTTAAAATTCCCCTTCCTCCCATACTTGTCAGGCTGCTGCTGCTAAGTCACTTCTGTCGTGTCCAATTCTTAGCGACCGCATGGACTGCAGCCTACATGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTCCTGGAGTGGGGTGCCGTTGCCTTCTCTGACTTGTCAGGCTGCCTGCAGTTTAATATGCAGTATTGTGCAAAACAGAGTCCAGTGCTACAATTAATGAAGCAGAATTGAGGACTTCCCAATATGTAATCAGGATCTAAATTAGCATCAACACTTTGACATTCATTATACTTGTTTGGGCAAAGAAAACAAATAAGTATTTCTGGTATGTTTCATTGATTCCCAAACATCTTCAAATCTGGACATGTAGAGCCTGCCTCAGCTGGTTTTTCACAAATTTCATTAAAGTAGGTCAGAATCATTTGTCTCTTTAGGTGAAAACTGGAAACTTTGTCCAACAGTAATGGCATCAGTTGGCTCCACTGCATGTATATGGAAAGCTGAGACAATCTTGGCCTAACTCACTCTGTCTCAGACTTCAGACATTCCAGAATCACTGTCACAATGTTTACACTGAATTGCTACTTCTATTTTTTAATTGAGTTAAAATTATGTGTGTAAAAAAAGATTTTGTATCACTCTCTAAAAAAGCAAAGTTACTAGCAGTTGCTGTAAATAAGAGGCCACTACAAAATATATAACACAGTAATAATACAAGCCGGGGAGGGACTGAGCCAGTTTACCAGATAAAGGGGGTGTGACCTGAGACCCCCACATTCTCTGTTAGGGACATTTAAGAATAGAAATCGAAGCACACGCACTCAAATTGAGACTTTCTCTGCGGAATAGTCAGAAGCAGGCAACAGAGAAGGAATGTCTTCCGGTAGGCTTCAGCGTCACTGACAGCTGCCCCACCCCGGGCTGGGCTCCTGCAGGGCACCTGCTCCACACCCAGGAACCCCACTGTAACCCGTCTGCCCCTCTGCCATGGATGAGGGGTTATGTTTATCTTTCTGGCTCCCAGATTTACTTTTTATTTTAGTTTTTTGGTTTGATTAACTACACTTGTGACAATCAGAAAACTGAAGCAACTGTAAACTGATCCTCCTGGTTTTACTGAGCTCGGACTATTGACATTTTCCTAGTTAGACCTTAGTAATACACATCAATCGGTTATTTCAGTTAACTTTTAAAAGTATCTTCATGGGACACATTCTCCACTTGCAAGATCTTTAAAGTGCATCGGGTATTTTCTCCCCTTTTAAAGCAATTAGCCCGTTGCCAAAAAGTTTTAGCCATTTAAAGTTGGAACTGTCTTTCTGGGGTCTAATTCCAAGGACCATGGACACAGCAGAACAAGATGAAGGCACCAGGGCTAGTTAATTCCTTGTGAGGCAGGACCAGCACTTCTGTGTTGCTGTCTCTATGGCAATAGTTAGCTTTGGGCTCCTAACCACCTTCCACACCGGCCTCCCAACCCATTCAGATCCTGAGTAATGCCTATGCAAAAAAGCCCACAGGGATTCCTCCAAGTTTAAGGGCTTAAATCTCAAACTTTGATTCTGTGTTTGGAGAAATGAGAGTGGACTGAAAGGGCAAGCAATAAATTATCGTACCAAATAGCCATAGCGTTCGCTTCTAAGCCCCAATGCCACTCCACTCCTGTGGCCAGTGGTCAAAACAGAACAGAGTTAACTAGAGAGGAGAGAAAGTCAAAGGATCAGGGAACTAGAGCATTATGTGAATTCACCAGCAAGATGTACAGATCACTTGTATTTTGTTTTTATGGAACTAGGGGAATAGAACTGATGATCTATTTTAGAAATGTAAGCCATTGTTCACCTCTAATTTTTTAATCTGACAAAATGAGCAGCTTAAGTTCCATGAAACGAATAAACGTCTTTATAAAGTTTGTGAAGAACCTGTTATTCCTCTTGTGGTAAGCCATCCCTGCTGCCAGTGACAAGCCAGCACTGCGTGTGACTAGTTTGCTAATGTGGCCCCGTTGTAGTGAGCTCTTTTCTGGGCCTGTGTGGGATTGTCTCGGGGAAATGTGGCTTAGCTAATAGCCCTGATGGGGTTAGTCATGTCATGTTGACCACGGCTGGGGTAGATGGATGAACTACTACTTTGGGATATAAAGCTCAAGACTATGGAAACTGGAAGTTCCTTTGTCCTAAGGCAATCGGACACTGCAGTTTTACCCACTTGTTTTGATGTTTCCGTGACTACTTCACCAACTCTGCCATGGAAGTGTATAGCACTTGTGTGGACATTTCTGATCTCTGTACCTCTTGCATTGAAAGTTGGCCATGAAAGCTTATTTCCTCTCCTAGTTCTCAGTAAGTTCAACACTTCCACCTTTGTCTTCATCATGGTCAAGTTCACCACCTTGGTTGATGCACAGGTGTTGGCAGCTAGAAATATGTAATTTTACGTGATAGGAGCACATAGAACCTGAGACCAAAAATGGGAGAGACCAGCTCCTCACGGCATCTCATTTCTAGGCCGAGACTGAACAGCTGGTGGAAAGAATTACCTGTGGACTGCAAGCAGACTTATCTGTGGACTTGGGTTTCAAGTTGACACAGATGCCACAACTCTAGGGTGTCCCATGGGGACCAGGTGACCAGGGTAAGGGAAGCCCCGGCCAGCTGTATTGAGGGGGCAGCAGTGCCCACTTGTATGAACCACTTTGAACACTGGCAGCACCCAGACTCTGATTCGGCTGGGGAGGGAGTCTGGCTGGGTGAACACTTTTACCACAGAATCAAGACCGAGGGCCAAACTGGGAAAATCAGGTTGCCGGGAGCTGGCTCACCCGACACGTGGAGCTCCTCACCATGCTGTCAAGAACATGGTCAGAGCCCAGAAGTGGGCGGGTGTGGACATGGATGGCTGACCCCTCCCCTCTGTCCAGCCAGACCACCTGCAGCTCTAGTGAACCCCCAGCAGCCCCCATGCCGGGATCACTCACTTCTGTGAGCTGTTGCTGACTGGGTAGGTGACTCCTCAGGATGAGGACTCCAGCGGGCTGTGGTCATGCACTATGGTGAATGTCCACCGCCCAGGACAGGGACCAAGGCTCGGGGGCACCAGGGACATTGGAGGGTGCTGGCTGCGCTCACACCCGCTCCTGGTGTTCCCCGGCAGAGCACCCCACTTCCAGTTCCCCCCACCAATGGGCCATATTTCCTGCAGGGCCCTCCCTCAGGCTGCAAGGACCTCTTGCCACACCTGCCTCTACACTTTAAATCCTGTCTTTCAAGTCCAACTGAGAGGCTCCTTCCCCAGGGCCCTGCTCCCTTTCTGTTCCCTAACCCATCACAAGGTGCCTGCTGGTTGACTCTTCCTCCCTCCCCCACCCCCAGGAGTGTAGGACGAGGGATGAGGGAAGGAAGGGAATGAAGGAAGGC EMBV3_25481 CAGCTGGATCGAGACGCCCTCCTCTATCAAGTCCATCGACTCGAGCGACTCGGGGATTTA Gene GeneID:505142|TBR1:XM_002685340:193_cdna Constitutive 0 NULL GeneID:505142 2 GENE TBR1 NULL T-box, brain, 1 EMBV3_39701 AGATGAGAGTGTGTGACGGAGTGCTGGGGCTGGAACAGGTGGGTAGGGGCCCGTGGACTC Gene BVT0102_443788 + 1 EMBV3_18145 GK000011.2:2140974-2221055 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09062 GTGGCTGGGGCTCCTGCTGCTCCTGGTGGCGGTGACCCTGAGGGACTCTCTGAAGAAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33485 ACATGTCAGCTCCTGTATGCACTGACCGCGGCTAGTGCGAATCTGGGAAGAACGAGTATG Variant GeneID:616488|LRRC39:NM_001076425:197_cdna 51^243 1 EMBV3_21031 GeneID:616488 3 GENE LRRC39 MGC128228 leucine rich repeat containing 39 EMBV3_19884 TCCACAACTAGGAACTGATCGCCTAGATACTATCACTCAGGTGCACAAACGCATAAGCAC Gene BVT0102_405388 + 1 EMBV3_32966 GK000022.2:11405984-11457899 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00771 GCAGAACCCAAATTAGTGGGTGTGCAGTATTTATTGTAATTCAAAGACTTACACAGAATC Gene BVT0101_023059 - 1 EMBV3_04030 GK000002.2:44166682-44185983 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102356 TCONS_00102360 TCONS_00102359 TCONS_00102361 1 XLOC_061847 Coding TCONS_00102360 XLOC_061847 Coding Coding LOC100847279 2:44146282-44169219 j TSS76233 3787 1 TCONS_00102360_3 370 0.0213889622392395 10 0.835324380885944 7.99645489701509e-06 9.08420525602641e-05 0.000107025703425995 9.81735188076631e-05 0.00014024356382423 0.000105315359042553 0.000183973636157417 5.77581109437483e-05 0.000422312621601212 1.61864087415868e-11 6.20212208921053e-05 2.73837981232295e-08 7.42363405432659e-06 4.51023672755081e-05 1.46258726051268e-17 8.37316256882276e-06 0.00239733939954891 8.45120014514337e-12 4.73363719327735e-05 0.000246394450238172 2.28825284711725e-05 2.91045997203204e-06 4.50046706260791e-07 0.00031560609063038 0.000164356994445169 0.000289758693009408 2.17240565555987e-06 1.35516385489752e-06 1.04848336477027e-06 7.36359489719546e-05 XM_003585736.2 LOC100847279 PREDICTED: Bos taurus signal transducing adapter molecule 2-like (LOC100847279), mRNA. 0.0 6754 99.21 0.997359387377872 NM_005843.4 STAM2 Homo sapiens signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 (STAM2), mRNA. 0.0 1763 86.41 0.374438869817798 TCONS_00102360_3 sp|O75886|STAM2_HUMAN STAM2_HUMAN Signal transducing adapter molecule 2; 0.0 694 90.19 0.989189189189189 3 coding 0 0 0 0 0.0099523938520788 0.975876212928159 -0.00193812553570513 0.971744635718482 ATGCCCTTTACTGTCTCAGCTGCTGCCAAAAACGGTACATCATCGAACAAAAACAAAGAAGATGAAGATATAGCTAAAGCTATTGAATTATCATTGCAAGAGCAGAAGCAGCAGCACACAGAAACAAAATCCTTATATCCATCTGCAGAAATTCAGTCAAATAATAAAGTTGCAAGGAAAGTGAGAGCTTTATATGATTTTGAAGCCGTTGAGGACAATGAACTCACTTTTAAACACGGTGAAATTATTATTGTTTTGGATGACAGTGATGCTAATTGGTGGAAAGGAGAAAATCACAGAGGAATTGGACTCTTCCCATCTAATTTTGTAACATCTGTGGACAAATTGAATATAATTGATGATGAGGAGGAGGAAATTAAGAAATCAGAGCCTGAGCCTGTTTATATAGATGAGGATAAGATGGATAGAGCCCTGCAGGTACTGCAGAGTATAGATCCAACAGATTCAAAACCAGATTCTCAAGACCTCTTGGACTTAGAAGATATCTGCCAACAGATGGGTCCAATGATAGATGAAAAACTTGAAGAGATTGATAGGAAGCATTCAGAATTGTCTGAATTGAATGTAAAAGTCTTAGAAGCTCTGGAACTTTATAATAAGTTGATGAATGAAGCGCCAGTATATGCAGTCTATTCAAAGATCCACCATCCAGCACATTACCCAACTTCATCAGCTGGAGTTCCAATTCAGACATACCCAGTTCAACCACATGGTGGAAACTATATGGGTCAAAGTATTCACCAAGTCACTGTTGCCCAAAGCTACAGCCTAGGACCAGATCAGATTGGTCCACTGAGATCTCTGCCTCCAACTGTGAATTCCTCAGTGACAACACAGCCTGCTCAAACTCCGTACTTAAGCACTGGACAAGACACTATTTCCAATCCTACTTACATGAACCAGAACTCTAACCTTCAATCAGCTCCTGGTGCAGCTGCTTACACACAGCAGATGGGGATGTCTGTGGATATGTCATCTTACCAGAACGCTACTTCCAACTTGCCGCAGTTGGCAGGCTTTCCAGTGGCAGTTCCAGCTCATTCAGTTGCACAGCAGCAAACAAATTACCATCAACAGCAGCCTCTCCTTTAAAATCAAACCAAGCATTTTCTTGAAAGCCTTCATAAGTGTACTACTCAACCCTTGTGATTATAATCTGAAAATACTAAAAGAAGGAAAAAAAAATTTTCTCAACTGAAAAGACCCATGAATAAATAAAGCACAAAAACCTGTCTTTCTTTTTATGCTATAAAAAGTTCTTTTCAAGTTCCAGCTTGTTTGAAGTCAGACTTTTGATCAGAGGCCGCTTCAAGTTGCTTCCCGTTAGTTTTTTCTTACTTTCAAATCTCTCTACACAAATCTGGACAAACAAACAAATAGCCTTATGACACTAAACAACAAGAGATAGGAGTGTAGGAGTGTATAAGGAAAGCAGCATTTACCCCTAAATTGTCATGGTAATTGGGAAAGCACTGAAACCTTTAAGTACTTTCTGTCTGCTCTTTTTTTTCAGTTTCCCACATACCATTGTTTAAAAAGGCGAACATGTTTTTGTGCAAGCATTTAGCTTCCCTGCGTATTTCCTCTGTTTCCTTAAATTGCAGTTGTGTTTGCAGTACTGTCAGTTTTGCTCTCAGTGATGTGCTGAGTAATAATTAGCATAGAATTGTCTACGGAAGGAAGAGCACTTTGGGAGGAACAGAAATGTTTTCTGTTATTATTAGTGAAGACCATGTAAATGCAGGTGTGTGTTAAAGTGTTTAGCCAGTTCTCCAGTCATGCCAACAGTGGGTTGAGGGATGCCCCATGAAACATTTCCATTCCCTGGGGAAAAAATAGAAAACATTTTTTCCTACAAGGGTCCTTAGCATTTAGAATTGTCACTTAACAACCTTTTCAAGTGGTTTTGGCCAGCATCTAATGAAGATATAAGGTCCATTTGGTTTTGTTTTTTTTTTTTGGTTGGTCGGTTGGTTTTGTTTTTCTGCAGCATGGTGTGCAGAGACACTGCATTTCCTTTTTACTGACTGTGTGAATTTGAGCTACGAGACATTCCTAATAACTTGATGCAGTGTATACCAGGCGTGAATAATGTGTGTTTTTACTGATGTGTTGTTTTTTTAAAAGGTGATTTGAGTACCAATGGTATGCCAGACTGTTGACAATTTTGGCCATTGCTTTCAGAAGTAATCTTGAGCTTGTGGAATAATAACAGGCAGTGGATTTATAGGGAAGCCATCAAGACAGTTTTCCTGAAGCCTATGTTCTAGGTGAGTGTGAGGTGCTAATATATTCCACGTACTTTGGGAGTTAGGTAGTAAACCAATAGGGATTGTTTTCTTTCCTAAGAATTTGCACCACTACTGCATCACCTACCAACCTTTTAGATAGCACAAAATGTGAATACATATGCTTACAGATTCATGGTATTTCAACTGGGAGAAACAATGGATGTAAAGTTAAGTTTTTAAAAATTTAACTAGCAGGAATTCCCTGGCTCTCCAGTGGTTATGACTTGGCCCTGTTACCACTGGGGTCCATATTCAAACTAAGATGCAGCAAGCTGCAAAAATAAATAAACTTGCATGGAAGCAAGATTTCTATATTGTTTTTTAAAGAAAGCCCTTAATCTTTCTACTAAGAATCCATTTGAAGATAGTGCTCTGGAAATATTTGTCATTTCTGTATTTATAGAAATTCCATTATAAATATGTTCCTTTTTCAAAGAAACTATATTCTGGGAAAAAACAGTCTTCTATATACTACTTGGTCTACATTTAAAGGGAAAAACAAGCAGAATTTGAAGAACCCAATTTCTGTCATTGTTTTATTTCAGATATAAGTAACTGGAAAGAAACTTTTAACCTTTGATGTCTGTTTTCTGTTTTTTATCCAGTATTTTCCTTCCATGTGAATTCAGTTATATACTTGTAAGAAATTCTAAAATAGCACCTTACTTTTTTGGAAATGAATCTTCTATAAAGAAAACAAAACAGAAAAAACATTTTCAAAACCTCTTGATAATAATTAACATTTGCATAATATATGAAAAATCTTACATTTTCCTCCCAAACAATATTTAATAGTTATTTTAATGTTTGTGTAAATAATTTATGTATAATTGTGATCTGAGTTGTAAAAGCTTGATTCTGTGTAAGTCTTTGAATTACAATAAATACTGCACACCCACTAATTTGGGTTCTGCCATTTTTAAGTTCAACTAATGTAGTTTTGAAATGATATAACATGAAACATGTATATAGTGTATATTGGCATTTATCTGTGAAATTTTATATATCTGGAAGTTTCTTCTCCCTTTTAAATTAAAAATAATTTTATTTTTGCCATACTGTAGCGAATTTTGTGTTACAGGTTGTTGATAGTATAAAAATGTTATTAAATCTGTGTACTGAGATGATATTTTTGGTGTTAATAAGAAAAACAGGGTTATTTTTCTTTCTTTTTCATGATCTTATGGATGTGTTTAAGACCTGTTTATAATTAAATGTTTTCTGCCAAAAGAATTGTCTAACATCAGATTTCTACATTAGTTTCATACTATTTTATATAAAAAATAAAAATAACTTCTACTTTTTCATATGGAAATCTTGGTACATTAGAAAGAATTCCTGACAATTTATAATACAATTTTCACGAATGTAGGAAAAATCTACCCTAGATCTTAAACTATATTAAGTGAGATATGTTCTTACACTTTGAAAAATACATGCTGTACCAACATTGTCTTGTAATTAGGTAACTTGTT EMBV3_38159 ATTCAAACATCTCCTGAAGAAAACCCAGGACTTCCTTTGAGAGGCTGCTGTGGCGAATTT Variant GeneID:518974|ATP6V0A4:XM_002686997:859_cdna 408^547 1 EMBV3_31903 GeneID:518974 4 GENE ATP6V0A4 NULL ATPase, H+ transporting, lysosomal V0 subunit a4 EMBV3_08485 AGGTTGAAGTTCCGACTAATACCTGCGAAGTCAACTAGTCTGGAGGGGGAGTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_37806 TGGCTGAGCTTGCTGGCGTGGAAGCTGCATTTACCCATCTCCCTGGTTCTCCTGCTGTGT Gene GeneID:616659|LRRC61:NM_001076431:724_cdna Constitutive 0 NULL GeneID:616659 4 GENE LRRC61 NULL leucine rich repeat containing 61 EMBV3_41461 ACTCGAATCCAGACAAAAAAGTACAGGAATGCAGATGGGTGCTATCAGAGCCTCTCCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18665 TGCAGAAGCTCCCAAATGCTCTGAAGGAACTGCCTGAGAATGTAAAAGTGTGTCCTGGAG Gene GeneID:520250|ANKRD32:NM_001102058:2_cdna Constitutive 0 NULL GeneID:520250 7 GENE ANKRD32 MGC166276 ankyrin repeat domain 32 EMBV3_32290 ACACCGACATGGAACAGGGACTCACTGGGGGAATTTGTGACATTCGAGGATGTGGCTGTG Variant GeneID:506436|ZNF655:NM_001075261:101_cdna 376^461 2 EMBV3_36659 GeneID:506436 25 GENE ZNF655 MGC139342 zinc finger protein 655 EMBV3_19871 TGCAGGGCTGGGTCTGCTACGTCACCTTTATCTGCCAAAGACTTCTTCCCTTCCAGACTT Variant GeneID:613305|MIF4GD:NM_001034732:20_cdna 401^821 3 EMBV3_20570 GeneID:613305 19 GENE MIF4GD MGC128193 MIF4G domain containing EMBV3_28254 AATACACTACAGAACATTGTGTCAATGAAGATAAGCTTAAATAGTATGTGCCCTTCTTGG Gene GeneID:537290|TWSG1:NM_001076089:161_cdna Constitutive 2 NULL GeneID:537290 24 GENE TWSG1 MGC139157 twisted gastrulation homolog 1 (Drosophila) EMBV3_39388 CTGCAGCGATTCGTGGGGTCCGAGGCAAATTGGGTCTTCGTGAAATTCGTATCCATTTGT Gene GeneID:327698|NDUFA2:NM_175815:202_cdna Constitutive 0 NULL GeneID:327698 7 GENE NDUFA2 B8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa EMBV3_13560 CGGAAGCGCTGAAAGAGACTAGGACGTGATTTATTAACGACCAACTTCTGTTATTGTGTG Gene GeneID:281730|CTBP2:NM_175712:9_cdna Constitutive 2 NULL GeneID:281730 26 GENE CTBP2 NULL C-terminal binding protein 2 EMBV3_28702 GGAAACAGCAAGAGGAGGAGCTCAGTTAAATGTGGATGGAGTAGAATGAGCCAGGCATCC Gene BVT0102_061013 - 1 EMBV3_25635 GK000003.2:10683412-10821556 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03657 CCCTGGGGGTGTCCTTTGTAAATGTTCCTCCATCCTCACTGTACCAGGAGTGTGTGAATA Gene GeneID:614606|CAMK2N2:NM_001114514:55_cdna Constitutive 0 NULL GeneID:614606 1 GENE CAMK2N2 NULL calcium/calmodulin-dependent protein kinase II inhibitor 2 EMBV3_31195 GAGGGGTGACTGGAGGGACCCTGTACCCAGGGAACATCATTAAGAACGAGGCCCTGTTCA Variant GeneID:444987|NEIL2:NM_001013003:8_cdna 520^719 1 EMBV3_40092 GeneID:444987 8 GENE NEIL2 NULL nei like 2 (E. coli) EMBV3_26607 CACTGTGGTGCCGCTCTCCATCCCTCACATGACCTCAGAGAAAACAGTGCTCCAAGGTTT Gene GeneID:535227|CYP2U1:NM_001076050:68_cdna UTR3_Alt 2 NULL GeneID:535227 6 GENE CYP2U1 MGC140497 cytochrome P450, family 2, subfamily U, polypeptide 1 EMBV3_30728 CCTGATGGGCTGTGTCAAGCTGTGTAAGAAGATTGAAGATTGCGTTGTAGTCAAGAACAC Gene GeneID:615784|LOC615784:XM_002691885:15_cdna Constitutive 0 NULL GeneID:615784 12 GENE LOC615784 NULL hypothetical LOC615784 EMBV3_42227 CATGCACAACAACTACACCGCCTTGTTGGGAGTGTGGATCTACGGCTTCTTCGTGTTGAT Gene GeneID:789734|LOC789734:XM_002687976:113_cdna Constitutive 0 NULL GeneID:789734 5 GENE LOC789734 NULL similar to mCG141069 EMBV3_34751 CAGAAAATCTCTCCCGCAGCCCTGTGTCAAATGGGGACTGTATAAGAACATCTTCTGGAG Variant GeneID:616607|MORN2:NM_001076428:173_cdna 116^166 2 EMBV3_31188 GeneID:616607 11 GENE MORN2 MGC133493 MORN repeat containing 2 EMBV3_17482 CACGGGAAGGATAGAGGTGGCTTCAGCGCAGGAAAAACGAACACCAAACTCAGTGAAGCA Gene GeneID:533289|PIP4K2A:XM_002692089:279_cdna Constitutive 0 NULL GeneID:533289 13 GENE PIP4K2A NULL phosphatidylinositol-5-phosphate 4-kinase, type II, alpha EMBV3_06148 GGAAAGACAAGAAATGAAAGGGGTGACCTGACACTGGTGGTACTACTGCAGTGTGTGTTT Gene GeneID:281062|CDH2:NM_001166492:49_cdna UTR3_Alt 2 NULL GeneID:281062 24 GENE CDH2 NULL cadherin 2, type 1, N-cadherin (neuronal) EMBV3_11949 AGTGTGGCCAGCCTCTCAGCGGGATGTCTTATATCTGTCTGCCATTCGAAAGATACCAGC Gene GeneID:286797|COL4A3BP:NM_174765:210_cdna Constitutive 0 NULL GeneID:286797 10 GENE COL4A3BP NULL collagen, type IV, alpha 3 (Goodpasture antigen) binding protein EMBV3_39546 TCTGCCAAATCTGGAAAAGACATCACCTGGTATCCACAGCTGCACTCGGTTGCTAACTAT Gene GeneID:100336614|LOC100336614:XR_083768:379_cdna Constitutive 0 NULL GeneID:100336614 10 PSEUDO LOC100336614 NULL cartilage intermediate layer protein, nucleotide pyrophosphohydrolase-like EMBV3_00546 TGGGGTGTGTGCTGGAGCCTGCTTGCTTGTGTCCTGGGCTGAGGCCTGGTCCTGTACCCA Gene GeneID:100313358|MIR2438:NR_031051:2_cdna Constitutive 0 NULL GeneID:100313358 5 GENE MIR2438 bta-mir-2438 microRNA mir-2438 EMBV3_31652 GGAAGGTAGTGATGATGACCAGCAGAACAAATCTGGCAGTCACAAGTCTGAGAAGAGCCC Gene BVT0102_273209 + 0 NULL GK000003.2:18690942-18768798 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175880 1 XLOC_105659 Coding TCONS_00175880 XLOC_105659 Coding Coding - 3:18721280-18722122 - TSS130639 842 1 TCONS_00175880_2 210 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000358717318412517 0 0 0 0 0 0 0 0 0 0.000249914810186405 XM_005197739.1 LOC101909330 PREDICTED: Bos taurus trichohyalin-like (LOC101909330), mRNA. 0.0 1260 100.00 0.827790973871734 0 coding 0 0 0 0 -0.00573273286018949 0.963807037303563 -0.00292156735646877 0.955511244047627 GGGAGCAGAATCCACCTGCAAGACTGTATGCAAGAGGGCAACAAAGAGACAATATCCCCACATCAATGGATGATGGAAGACATCGAGAGAGAAGCCTGAGCCCAGAACCCAGTAATGATGGAAGACGGGAAGTAAGACCAGAACCCAGGAATGGTGGGAGAGAAGAGGTTAGAGAGCAAAGGCCACCTTCAAGAAGGGATGAGAGTCATCTCAGAGGCAACAATGAGAGCAGCTCTGGAAGAAGGCTATCTGTTAGGGAATCCAACTATGAGACAGAAGAGAAATTAGGGAAAGTACAAGATCAAAAGCATTTCCCCAAGCAGGAAAAAGCTGATGTTGAAGATCTAGATCTTCAGGAGTCTGCATTCACCAGAAAAATTGGGCCGATTACCTGTGAGGTATACTTTTTTTCCAAACAGCAAGGTAACTGGTTATGCTACTGTTTGCATGATCCATCAGGAATAGGCAATGCAGGAAAGAGGTTCACTTATCCAGATTTGGGGATGTTTAAGGATCACAGGAGTGGAGGAAGCTATGTCAACTCCCCAACCTGGGATCCAGAAGAACAGTTGTACCAAAACAAGGAAGAAAGACAGGAAGGTAGTGATGATGACCAGCAGAACAAATCTGGCAGTCACAAGTCTGAGAAGAGCCCTGAGGTCCCAAGTGAGTCTAGCTCCTCTGAAGATTCATCTTGAAGTCACTTCCAGATGTTCCAAGAAATTCTCCCTTTCCAGTTGATTGAGCTGGTTGATTTGGGATTCTTGGCTTTTTCTTTCTCCATGTATCTCAGACATCTAGCTGTAATGTGTATTGGTGGAACTGCTCAACTTTTGGTTTCT TCONS_00168843 . 3' 30340 TCONS_00168843 . 3' 31181 EMBV3_37568 CAGATCATGCAGGTGCTGCGTAACAACGAGATGCAGAAGTTCAAGGAGATCCAGACTGAG Gene GeneID:538896|BDKRB2:XM_002696831:638_cdna Constitutive 0 NULL GeneID:538896 21 GENE BDKRB2 NULL bradykinin receptor B2 EMBV3_24626 GCAGCTGTGGAAAGAGAACTTGTGAGCCCTCTGCTGGCTAGACCAAAGTAGCATAAACAG Gene GeneID:539399|SLC39A9:NM_001101191:187_cdna UTR3_Alt 2 NULL GeneID:539399 10 GENE SLC39A9 NULL solute carrier family 39 (zinc transporter), member 9 EMBV3_17709 TTTGAACAGCAGTGAACCCCTCTTTCTTGGGCAGACGGGACTGGGCACCACGGAAGAAAT Gene GeneID:281690|CHSY1:XM_002696498:70_cdna UTR3_Alt 2 NULL GeneID:281690 21 GENE CHSY1 NULL chondroitin sulfate synthase 1 EMBV3_12000 GGGTCAGAGAGGTCACTGATTACATGGAGGTGGTTCACAGGGGTGAGAACATGGCAATAA Gene GeneID:536741|MME:XM_002684999:113_cdna Constitutive 2 NULL GeneID:536741 1 GENE MME NULL membrane metallo-endopeptidase EMBV3_14853 GGAGGACCTGAAGTCTGGTTGACACTTGGATGGTGAGAGATGGGAGCAGTTTGGGATGTT Gene GeneID:513793|EIF3F:XM_002693065:376_cdna UTR3_Alt 3 NULL GeneID:513793 15 GENE EIF3F NULL eukaryotic translation initiation factor 3, subunit F EMBV3_11404 GCTGAAGAAAGGAAGCAACCCTAGCCAGAATCCTACCCTTTGACGAAATCTCCCTTTTGG Gene BVT0102_179732 + 0 NULL GK000004.2:107511648-107518110 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182751 TCONS_00182755 TCONS_00182756 TCONS_00182752 TCONS_00182759 TCONS_00182757 TCONS_00182760 TCONS_00182758 TCONS_00182754 1 XLOC_110957 Coding TCONS_00182752 XLOC_110957 Coding Coding CASP2 4:107494880-107513220 j TSS136512 3262 1 TCONS_00182752_4 399 0.167688534641324 11 0.822727520584547 8.57317483562127e-23 1.64358484144635e-16 0.00023589902693195 9.56475584339823e-05 0.00135309574089018 0.00095267530156954 0.000677217517579905 0.000601310795699347 0.000999559507377308 0.000375834186521509 0.00012048868739751 0.000999324700646387 3.84205588552942e-17 0.000873565610104676 5.72439763592266e-26 2.49591796529109e-36 0.000763783729335104 5.88193950535802e-17 0.000393444841171147 0.00274248105518769 0.000987193503490254 1.94458473933016e-07 0.000743825869682257 1.42869598835651e-27 0.00103422073785251 0.00296456729862571 1.89820591583131e-06 0.000527003687853377 1.90775272488642e-56 0.00113066550794354 NM_001144104.1 CASP2 Bos taurus caspase 2, apoptosis-related cysteine peptidase (CASP2), 0.0 2188 100.00 0.37155119558553 NM_032982.3 CASP2 Homo sapiens caspase 2, apoptosis-related cysteine peptidase (CASP2), transcript variant 1, mRNA. 0.0 1335 84.69 0.366339668914776 TCONS_00182752_4 sp|P42575|CASP2_HUMAN CASP2_HUMAN Caspase-2; 0.0 628 84.82 0.954887218045113 2 coding 1 1 1 1 0.115396961810679 0.464216433597958 0.0138665024837724 0.777540418968892 GGCGCGTTGCGCGCAGAAGGACGGGGGAGGGATGCTGGGGACCCGGCTCGGGGTTTGTTTGGGCTGTTGGGGGTGCGCGCACAGCCCGGGAAAAGTGGGAAATGGCGGCGCCGAGCGCGGGCTTCCAGTACCCCCTCCAGCCAAAGGAGCAGATGGCCGCTGATAGGGGGCGCAGGATGTTGAGAGGGTGTGGCATGCATCCTGACCATCAGGAAGCTCTCAAAAAGAACCGAGTGGTGTTGGCCAAAGAGCTGCTGCTGAGTGAACTGTTGGAACACCTCCTAGAGAAGGACATTATCACCTTGGAAATGAGAGAGCACATTCAGGCCAAGACTGGCAGTTTCGGCCAGAACGTGGAACTCCTCAACTTGCTGCCCAAGAGAGGCCCCCAGGCCTTTGATGCCTTCTGTGTGGCCCTGAGGGAGACCAAGCAGAGTCACCTGGAGGAGCTGCTGCTCAGAACCCTGTCTGGTCTTCAGCCTGTAGTCCCGCCGTTGAGCTGTGACTATGACCTGAGTCTCCCTTTCCCGGTGTGTGAGTCCTGTACCCGCCACAAGCGGCTCCACCTGTCTCCAGATGCAGTGGAGCACTCCCTAGACCACGGAGATGGTCCTCCCTGCCTTCAGGTGAAGCCCTGCACGCCTGAGTTTTATCAAACACACCACCACCTGGCCTACCGGTTGCAGTCTCGGCCCCGCGGCCTGGCACTGGTGCTGAGCAACGTACACTTCACTGGAGAGAAAGACCTGGAGTTCCGCTCTGGAGGGGATGTGGACCACAGCACTCTTGTCACCCTCTTCAAGCTCTTGGGCTACAAAGTTCACGTTCTTCTTGACCAGACCGCTCAGGAAATGCAAGAGAAACTGCAGAATTTTGCCCAGCTCCCGGTTCACCGAGTCACTGACTCCTGCATAGTGGCGCTCCTCTCCCACGGCGTGGAGGGCGGCGTCTACGGCGTGGACGGCAAACTGCTCCAGCTACAAGAGGTTTTTCGGCTCTTTGACAATGCCAACTGCCCAAGCCTACAGAACAAACCGAAAATGTTCTTCATCCAGGCCTGCCGTGGAGATGAAACAGATCGTGGGGTCGACCTGCAAGACGGGAAGAACCATGACCGATCCCCCAAATGCGAGGAGAGCGATGCCAGCAGAGAGGAGCTGCTGAAGATGCGGCTGCCCACCCGCTCAGACATGATTTGTGGCTACGCCTGCCTCAGAGGTGAACGCGCTCATCAAGGAGCGAGAAGGCTACGCCCCAGGCACGGAGTTCCACCGCTGCAAGGAGATGTCCGAGTACTGTAGCACCCTGTGCCGCCACCTCTACCTCTTCCCGGGCCACCCCCCCACGTGATGCCAGCCCCCCACCCCCTGCATCCCACCTCGTCACCGGGCCACGTGGAGGGACCTGGCGAATGACACTGTGCACGCAGTATCTTGTGGGTTTCCTCGATGATTGTGTTCAGCTCCTGCCCCCAGCACTCTTGGAGGAAGCACCCTGGTAATTGCTTTTGTTCCAGGAGCTGAGATGTCCCAGAGGTCACACCTCCCGTCTCTCCTTTCATGTCCCGGCCCCATTTGTCCCAAAGTGGGAGTTTCAGTTCAATGCAGACAGTTTTCATTTGATTTCAAAAGGCCAAGCACCCTCTGCTACTGTGGGCGGGCCCGGACCTGTGCGTTTGTCCCCTTCGATTCCAGAGGGTCTCCCCCGGGAAGGACTGTCTTCTCAGCTCAGCTCTTGGCTCCTTGGGGCTCTGGGAATTCCGCCTTTCAGCAGAGGTCAGAATTTGGATGCCTTGTGTCTGTTAACTTGTTGATCTTTGCCCATGGAAGCTTCCAAGATCTTTTCATGGGTTGTGGGTGCCCTGAGCTTTGTTCCTGAAGTGAGCCTTGCAGGGAGTGTCAGCAGAGGAGATAAGGGTGCTGTGCTTGCCCATGCTTGGCAGTCTGCCACCTTATCCTCGTGTTCCTTCCCGTGAAGTGCCCCTCCTAGAAAAGCTTCCTGGCTGTTATCTTTCTGCTTCCTGTTTCTCCCCTCTTTACCTTTGTCTCATTCTGTTTACGGCAGCCACGAAATCGTCTAAAATACAGCTTAATTGGATCGTTTGGCTGCTTGAGGATGTAGTATAGTACTTTGTTCCGGCTTTCTTCTTCTGTATTAAATCCTCTCTGGATTTTATGTGTTATTTCCCCTTCCCATTGTGACTGTCCATTTCAGGGAGGTCAGTGCTCTATATATGTTATTTATTTACCATAGAAGCCACCTTTATATGCACTTACATGAAGCCTTCTATTCTTAAAGGCCTTTTTTGCCGTACGACAATCTAATCTCTGTATGACAGATTTGTTTTTAAGTATAAATCTGATCCTCTCGCTCCCCTGCTTGGAACCCTTTGGTTTCCTGTCACACCTCTAATCAAATCCAGACTCCTTCCATTGGCCTGTAGGGCCTCATAAGTGCTGATTTCCCTGTGAGCGACAGCTCAATGGTGTCCTGGGTTTCTCAAACATTCTGAGGTCTTTCCTGGCCTAGACCATCAGGTACTGTTCCTGGGTCCGCTGAGTCCTACCCCTCGCCACTCTTGGCCCTGGTGGCTTCTTTATCCTTCAAATCAGAGCTCAAAGGCCACCTTTTTGTGGAGGCCTTCCCAAGCCATTCTATTAAAAATAGAGTGTTGTTTTTAACTTTATTTCTGTCTTCTGTTTAATCTCCTCATTGCACTTATCACACTGTATAATCATTCATTATATGCGTGCGTGCTTCACGTGTTCATTCGCATCTCCCCTTTAAACTCCATGAGGGTGGAAACCCTGTCTCTCTCGTTCACTAATACGGACCCAGTGCCTGGCACGTCATAGGTCTTCAGTAAATGTTTGCTGAAGAAAGGAAGCAACCCTAGCCAGAATCCTACCCTTTGACGAAATCTCCCTTTTGGTAAAAATGCCCAGTTTAGTGTGTGTACTCTGTGTCCTCACACGTGTTTTGTTTCATCCACTGGTATTATTAGCTCCTGAGGGCGGAAGTCACGTGCAGGGCGACTTCCTCTGTGTCTCCCGTGGTGCCGGGCGCAGTGCCCAGGCTCTGGTAGTTCAGGTGCTCAGTAAACACTCGTTCTGTGAGCCGGGGGCTTGGAGACTTGTTGCCAAGTCCTGCCCTTGGCTCAGTGTCATCTGGAAGTACTTAGGTGATAGAACCTTTCCAGTTCCCACTGCCAGGATTTTGTATTGCCATCTGGTGCCAAATAAATGCTCATATTTATTACCGA EMBV3_41321 TGCACATGAAGCGTTTTGTCAAGGATCTGGGATCTACCGCTACCAGTCTCATGACTATGC Variant GeneID:100125835|PCYOX1:NM_001105474:2_cdna 355^529 2 EMBV3_11013 GeneID:100125835 11 GENE PCYOX1 MGC157353 prenylcysteine oxidase 1 EMBV3_29518 CTGACCTTTTGGGGACGCAGTTGTGCGTGATTTACTTTTCTTTGACTCGTGCGTGAGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19518 CTCCTCATTTGCTTTTTCAGTGGGGTAGCACATCCCATATTTTAGAACAAGTAGGGGTGC Gene GeneID:527169|GRSF1:NM_001077971:74_cdna Constitutive 0 NULL GeneID:527169 6 GENE GRSF1 MGC152068 G-rich RNA sequence binding factor 1 EMBV3_14656 CCAGTCCTTTCCCTGGATTCCCCGAATTGAGAACCAGAAGGTGGTTAAGCCTGTATTCTC Gene GeneID:338059|ATP6V1B1:NM_176654:5_cdna Constitutive 2 NULL GeneID:338059 11 GENE ATP6V1B1 NULL ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 EMBV3_07430 GCCACCAGTTATGCCAGGAATGCCACCTGGAATGATGCCAATGGGTGGAATGATGCCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05523 TGCTGAAGGACATCAAGGACTTGGCAGAAGACATGAAAACTAATAGAGATACCCTGGTCC Variant GeneID:618054|PROM1:XM_002688467:41_cdna 785^859 1 EMBV3_20777 GeneID:618054 6 GENE PROM1 NULL prominin 1 EMBV3_20567 CCTTTGTTGTCTCCTGTGACGTCTTGACACAGAGCTAGATGAAGAGGTAGAGATGGACGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17607 GCCAGGCGGGGGTCTCTCTTCTGTCCTGATGAGCTAGATTCACTCTTCTCCTACTTTGAT Gene BVT0101_051495 + 0 NULL GK000001.2:72872417-72916629 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001128 TCONS_00001129 TCONS_00001134 1 XLOC_000264 Coding TCONS_00001128 XLOC_000264 Coding Coding ACAP2 1:72758560-72930983 j TSS551 7464 1 TCONS_00001128_6 813 0.027599142550911 24 0.956850053937433 0.00209434185744116 0.00189762401586496 0.00135878047474919 0.00122599403644882 0.000339444753282604 5.69578334770964e-05 0.000992089807419955 0.000752487591649856 0.00147721756220934 8.14585826762587e-24 3.08570470314695e-20 6.66642638489902e-44 1.14641181843398e-05 2.22794497663943e-11 0.000201039197537108 4.32206825539058e-19 2.10792707566003e-08 1.01102588770935e-93 0.00174719122165794 0.00141970646941813 0.000725053473271293 2.49822071340832e-38 9.92114113891837e-05 2.09131092301644e-26 0.00146895189652865 0.00126198278909995 0.00103169314885659 6.88765038245879e-12 3.21067471597731e-41 1.43891340868509e-17 NM_001105337.1 ACAP2 Bos taurus ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 (ACAP2), mRNA. 0.0 1469 100.00 0.108922829581994 XM_005269314.1 ACAP2 PREDICTED: Homo sapiens ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 (ACAP2), transcript variant X1, mRNA. 0.0 4756 87.84 0.508038585209003 TCONS_00001128_6 sp|Q15057|ACAP2_HUMAN ACAP2_HUMAN Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2; 0.0 1571 93.48 0.998769987699877 6 coding TCCTGGTTGGCCTTCGGGAATGCTTGTGGCAAGGCGGCTCCCACGGTCGCGCTGTTTATTGGCTCGCTCTACCGTCGCTCAGGCGCGTTGCCCGAGCGCCCGCAGGCGGTGCGGCCGAAAGCCCCTCCCATTGGCCGCTGGGTTTGTGGCTGGCTGGCTGAGGCTGTCAGTCCTGGGCCGTTTCCCCGAGGCAGGCGCTCTGCTGGGGGCGGGAGGAAGAGGGGCCGGACTGGGGCCTGACTAGCAGTCGCTGCCGCCACGGTCTTCGGGGCTGCTATGACCAGCGGACGACTCGCCCTCCGCAGCTCCGCGCAGCGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCCAGCTCAGCCGCTCCCGCGGCTCCCTCGGCTCTTCCAGTGTCCCCTGCGAGGCGAGGCGGAGGCAGGATGAAGATGACGGTGGATTTCGAGGAGTGTCTGAAAGACTCGCCCCGTTTCAGGGCTGCTTTGGAAGAAGTGGAAGGAGATGTGGCAGAATTGGAACTGAAACTTGATAAGCTTGTGAAACTGTGTATTGCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATGAATGGGATTCGAGACCTGGCACAGTATTCTAGTAATGATGCTGTAGTTGAGACAAGTTTGACCAAATTTTCCGACAGTCTTCAAGAAATGATAAATTTTCACACAATCCTATTTGACCAAACCCAGAGATCAATTAAGGCACAACTTCAGAACTTTGTTAAAGAAGATCTCAGAAAATTCAAAGATGCCAAGAAGCAGTTTGAAAAAGTCAGTGAAGAAAAAGAAAATGCGTTAGTAAAAAATGCTCAAGTGCAAAGAAACAAACAGCATGAAGTTGAAGAAGCCACAAACATTCTGACAGCAACAAGAAAATGTTTTCGACACATAGCCCTCGATTATGTACTTCAGATTAATGTCCTTCAATCAAAAAGGAGATCAGAAATCCTGAAATCAATGTTATCCTTTATGTATGCCCATTTGGCTTTCTTCCATCAAGGATATGATCTGTTTAGTGAACTTGGGCCCTATATGAAGGATCTTGGTGCACAGTTGGATCGACTGGTTGTAGATGCAGCAAAGGAGAAAAGAGAAATGGAGCAAAAACATTCCACCATTCAACAAAAGGATTTCTCCAATGATGATTCTAAGCTAGAATATAACGTAGATGCTGCAAATGGCATTGTTATGGAAGGTTATCTGTTCAAACGTGCCAGCAATGCCTTCAAAACTTGGAACAGACGCTGGTTTTCAATACAGAATAATCAGTTGGTTTACCAGAAAAAGTTTAAGGATAACCCCACTGTGGTGGTGGAGGACCTCAGGCTCTGCACAGTGAAACACTGTGAGGACATAGAACGGCGATTCTGCTTTGAGGTGGTCTCTCCAACAAAAAGTTGTATGCTTCAGGCGGATTCTGAAAAGCTGCGCCAGGCATGGATTAAGGCTGTTCAGACCAGTATTGCTACTGCTTACAGAGAGAAGGGTGATGAATCAGAGAAGCTGGATAAGAAATCGTCTCCATCCACAGGGAGCCTGGATTCTGGAAATGAGTCAAAAGATAAGCTATTAAAAGGAGAAAGTGCATTGCAGCGAGTCCAGTGTATACCTGGGAATGCCAGCTGTTGTGACTGTGGTCTGGCAGACCCACGGTGGGCCAGCATCAACCTGGGCATCACCCTGTGTATTGAGTGTTCTGGGATTCATCGGAGTCTTGGAGTTCATTTCTCAAAAGTACGATCTTTAACTTTGGATACCTGGGAGCCTGAACTTTTAAAGCTTATGTGTGAGTTGGGGAATGATGTTATAAATAGAGTTTATGAAGCTAATTTGGAAAAAATGGGAATAAAGAAACCGCATCCAGGACAAAGACAGGAGAAAGAGGCGTATATCAGAGCAAAATATGTGGAGAGGAAATTTGTGGATAAATACTCTATGTCATCATCACCTCCTGAGCAGGAAAAAAAGATTGTCTCCAAAAGTTGTGAAGAAAAGAGGCTGAGCATTTCTAAACTTGGGCCAAGTGAACAAATTAGAGCATCTCCTCAGAGTTCAGTGGTTGCTGTAAATAGCGACGAGGCCAGGCGGGAGTCTCTCTTCTGTCCTGATGAGCTAGATTCACTCTTCTCCTACTTTGATACTTCTTCAAAACTACGTAGTATCAAAAGTAATGACAGTGGAATCCAGCAGAGCTCTGATGATGGAAGAGAATCTTTACCCTCCACAGTGTCAGCCAATAGTTTATATGAACCTGAGGCAGAAAGGCAAGATTCTTCTGTGTTTCTTGACTCAAAACATCTTAATCCAGGACTCCAGCTTTATAGGGCTTCATATGAAAAAAATCTTCCTAAAATGGCTGAGGCTTTGGCTCACGGTGCAGATGTGAACTGGTCTAATTCCGAGGAAAACAAAGCAACACCACTTATTCAGGCTGTATTAGGGGGCTCTTTGGTTACATGCGAGTTTCTCCTACAGAATGGTGCTAATGTGAACCAAAGAGATGTGCAGGGACGGGGACCATTGCACCATGCCACCGTCTTGGGGCACACGGGGCAGGTATGTTTATTTCTAAAAAGAGGTGCCAATCAACATGCCACTGATGAAGAAGGGAAGGACCCTTTGAGTATAGCTGTGGAAGCAGCCAATGCTGATATAGTGACCTTGTTACGTTTAGCAAGAATGAATGAAGAGATGCGGGAATCAGAAGGACTTTATGGACAGCCAGGTGATGAAACTTACCAGGACATTTTTCGTGATTTCTCCCAAATGGCATCCAATAATCCAGAGAAACTAAATCGTTTCCAGCAAGATTCACAGAAATTTTGAATTTTTTTTAGAATGGGGAAAACAGTAAATCTAGTGACCCCCTAATGTATATATCTGAAAACTCACATATTTTTACTGCTTTAATTCTACTTACTTACTTTTAGTAGCTATTGAGTGGTTTGGAGAAGAGATACCCATTCATTGATATTTTTATAAATCAAAACATAGATCTCTAGCAGTTGGGAGAAGAACCTACTTTAAGACTTATTTTATTTTTGTTTTTTAAAAAAAGCCTGTTTAAAGGGCTGTTTTTTATAGATGAAAGTTGAATCTGGACTTAGGCCATCTCTAGGTTACAAGATGCTAAGAATTTATACAAAATAATCTTTTTTTCCCAATGAATGATGGCATTGATGTTTTTCTTCTGTGCACTGTGCCCAGGATTGTTCAGTCAAGCCTGTCAGCATCAAGTGGGAGCCTGATGTCCTGCCTGATTCCAGAACGTGTCTTTGCTTTAGCTTCCTGGATGTTGGTGGTTCAAAATAGTTTTTGTTTTTATTTTTTCTTGGTAGCTATTATATACACAATATGTAATTTAATTATCAGAACTAGAGGATACATGACCCCATTTCCTCATAAATGTAGTTTATCCCTCACGTCCAGTACTTTAGCATATATACAGTGGCTGTACAGATTGATATAACTCAGTCCTTTAGATTTATTCCATTTTATGAAGCAAAAAAAGAAACCGTTGACATTTTTTTTTTTCAATTACCAAAAGGATCTCATAGAAGTTATAGTTCTTCAATGTTGGGTTGATTTCCTAAAACCTTGACAATTTTATTGATGTAATAAAACTGTGTTTCAAAGGTTACTTGAATGTTGCAAAATTATGCTTTCATCAGATTGTAACTATCAAAGGAAAAGTTGACATAAAATAATGTAGAACATTTTTATATTTGAAATGTGTCCTTTTCAAGGTACATTTTTGCTGTTGCTCCTGGTGAAAGGAAAATCTCTCTGTAAAAGGAGAAAAAAAACCTCGTTTTTTAAGTTTATACTAAAATATACAGCAATAAATTGCTTTTTAATTCTTCTAACATCTATCCTATGTACTTATTGTACATGGTATACATTCTTTTAAATTACAGCATCTATGTAGGCTTCCCTGGTAGCCCAGATGGTAAAGAATCTGCTTGCAATGTGGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGGAGGGCACAGTAACCCACTCCAGTATTCTTGTGTGAAGAATCCCATGGATAGAGGAGCCTGGGGGGGCTATAGGCCAGGGGGTCTCAAAGAATCAGACACGAGTGACCGACTAAGCACAGTACATGTAGCTTTAGTATTTGGTTACATGAATCACAGACCGTTGAATTCCAAAATAATTATGGAATTGGATAGATACACTATACTATGGAAATATTAATTTTCTATGTATATGCTGCAAATTAGTTTGATTCCATCTTTGACTGACCTCTCTTGTCAGGAGTATAAAATAAGTAATTTGCCTTATGGTTAATTTTTAATATTGTCATAATTTAATTTTCTTTTTCAAGTTATATGTAAGTAGTGAGAGATTTTTAAACTTGAGTTACCATATAAGTAGAGAAATTATATTTCATTGGGTATATAATACATTTTCTAACATTTTCCCACCAGTAAGTAGAGTTTTCTAAGTTGACCAAACATCAAATCAGAATCTAAACAGGAATTACACTGAAATAAATTCACATCACAGAAAAGGTTCTGTATTTGTTTGATCATATTGCATGCATATAATGCTTATTTAGTAATAACTGCTGTGTATTAGATAAAGATAAAAATATATGTAAGGATTATTTCTAAGGAAAGGCTAATTTCCAAAACCTTGTATTATAATCGCAACAATAACAGGAACACCCTGTTTCACCTCTGAATCATAGATCACCCAGCTTTGCAAAAGTCTGATTTGTAGCATTTTTCTTAGTGTACTTTGAAATTAACTATCCAGAAAGCTCAAGGAGAAAGAAATATTTTGAGATGAGAAAGAAAGAGACAAAGAGAGGAAGAAAGAAAGAAGAAACAAGAGCCTCACTTTTTGATCCTCGGAATCCTTTTGATCTTTATCTGAAGAAGCCTAGGTAGTTTTCATTTTGGATCCAGGCTTTGGTCTCCAGATCACCTCTGGGGTCTCTCTTTGTAAAAGCAGTTCTTAGATACTCTTTTAACTCCTGTGGCTTCAGTCATGAGTTGTTAATGTGGCAGTAATTAGTGTCTACTTAAATTTAATTGTTAGAGATGTATTTGAAGTACACTAAAGATGATCATGGTTCTGAATATCTTCAGAAAATCTTCAAAGAAAGTGAAAATTAAATCTTTAACAGTGCAGGGAGCTTGTACATTGAAAAATACATTTATATGGCTTGGTTTCTTGACTATGGCAAAACCCAATTTGGATTAAATTTGACAGAAATGATGCAGTAGTAACAGCAAAGTTTTAAAGTAAATTAATGGTTACAAGTAGTTACAGAGTAGGTTGGCTTTTAACCAAGGTGAATTTAACTGTATCAACTAATAGCTTTTCTATAGTATGTAACAAATCTGAGTTTTATTGTGCTGCGAATTATTCAGTACAATATGGTCAATTACAGTGTAAACAATGTTAGTTATAATCTTGGGCTTCAAAAATCAATGTGATTGTCCTTTGTTTTCTTTCCCTAAGTGATCTGCTGGTATTTAGTTTCAGATCCCTTATTATTCCATTAATCATTATTAGCTCATTAGTTTAAAAGTTTGATTTAAAATAGTCTCAAAATAAGAGTATCAGTACTGTGAGGAATTTATACAGTGCAGTTTCATGTTAGAACTAGACTAAAGGTAATTGTGTAGTTATTTGTAATTTTTCATGGTAACAGTTAACATGTTTAAGATTTCTAATGTTTTAAAAAATTACCTTTGGTACAATTCTTAGAAATTCAGAGATTTCCAGGGATTCACTACATACAGTGTTTGCCTAATTTATACTGGTCTTCGTTATGTATTTTAATCAACTTTAGTGTTTACTTTGTAAAACATATATATTTGATTTGAAATATTACTTTGATTCTTCATGAGTGCATTTTGACAAAACATATACTTTTACAGTCTGGACAACTTAAATTTGTGTTAAGCAGTATTTTAAAAATATAATTTTACACATGTGAAGTGTGATCACAAGAAACAGTTGTATTTAAGACTAAATTTACTATCCGTTTTGAATAAGACATTCCCTTATCACTCTTATATTGTTTAATTAACTTTTCTGTTTGATAGCACTTTTGACTGTGGACATGGGCTGGAAAAATGCTGTATTTTTATAGAATGGTCTTTGTAAAATGATTTCAGACCTACATGATATAGTGGAAAGAGCACTGACTAGTAATTATTACTCTTTGAAATCTGAGCGCCTCACAAATAAAACAAGTTGGATGAAACAAGGTGAAACTATAACAGCAGTCTTTCCTGTACTGTTCCCACAGCTCCTCCCAGTGTACCTTGCAATCAGTGTATCTTGCAGGATTCTCACGGTAAGGCTTCTGAGATCACCAACATTGTCTCTTTGATCATGGGCTGCTGCTCTTGTTTCACAGAGCTGGTCTCTGGTTTGCTGGTTGGTGGCATAGCTGACACCAGAACCCCTGTCTGACTCATAGTCAGAGGCACTCATGTCATGAAATGATTTGAAAGCATTATAAATCAGCAAAGTCTGATAATGACTGCCAGCTTTCCTTGTGTTTTGATTTAAAAAAAAAAAAGACTCCAAATATTCTGGAAAACCTGGATATAAAATTATTTTGAAGAAATAGATTAAGGTTTGAAGACATCAAATTGTAGGGAATTTTATATTTTTGCAATAACAAACATTGACAAAGGCAAAATGTTGTAAAGGTAATTTTAATCCACCATATGCTTACCAATTCCTTGATTCTTCTAAACAAAGACAGCTAAAAGGGGCATGGATTCAGTTTGGCCAAGCCTTGACATCTATAAATACAATATTGTGGGCATCCTTTTCTGTTTACATAAACATCTACTAAAATGAGATAGTGGGAGGAAAGCAAGATTTGATTAAATAAACTGTTCTCTACATTGCTCTTTTCACTGTCTTATGTACTAGGTTTTCTTATTTTTCCTCAGCACACTTCCCAACCTTTTGGATATTCATTTTAAATAGGGAAAGCTCCCTACATTATAAAGAATATTGGCACCATTTATTTTATACAAAGGCTAAAGGTTAACTTTTAGAAATGATGAACTACTTTCCTATATGTGTTTACTTGTGCTTCATGATATTTCTGGATCATTCCAGTCATAAAGACTTATTACATGTAATATTTCCTGCTACCTGTGAAAAGATATATTTTAAAGAATGTATAACCAACAATCCATTTAATTTTTACTAGCATGTAGAGGATTTATTTGTATCTAATTCATGAATGTAGTTTTACTGTAGGATGTCACTGTAAATGGAACAAAGTACGTTATCTTTATAGTTATTCTAAGATGTACATTATGTAAGAATTGTAAATATTTGCCTGATTAAATTCTTTGTATGCCAAGAAATTATGTCAAGTCAATAAAAATCTCACTTCTGGCATA EMBV3_03056 CTGTTGTGACACTGCCTCCGCTGCTGCTCATCTTCCTGTCCTACGTGTTCATCCTCACTA Gene GeneID:618717|LOC618717:XM_002689705:171_cdna Constitutive 0 NULL GeneID:618717 8 GENE LOC618717 NULL similar to olfactory receptor MOR262-10 EMBV3_42234 ACTTATTCTGTGCTTACTGAAGCCCCTGGCCCACTTTCTTCCTGATCCGCCTCCGTAATG Gene BVT0102_092909 - 1 EMBV3_35510 GK000009.2:88500754-88612922 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022895 TCONS_00220566 TCONS_00107436 TCONS_00038669 TCONS_00207934 TCONS_00170890 TCONS_00206300 TCONS_00207933 TCONS_00242416 TCONS_00205125 TCONS_00188145 TCONS_00048805 TCONS_00219592 TCONS_00165978 TCONS_00125692 TCONS_00148960 TCONS_00002600 TCONS_00123823 TCONS_00218429 TCONS_00242415 TCONS_00246739 TCONS_00000529 TCONS_00232829 22 XLOC_013565 XLOC_133883 XLOC_063346 XLOC_022492 XLOC_126448 XLOC_103679 XLOC_124877 XLOC_149080 XLOC_124587 XLOC_114188 XLOC_028936 XLOC_132911 XLOC_100818 XLOC_077234 XLOC_090838 XLOC_000643 XLOC_075375 XLOC_131749 XLOC_149079 XLOC_151107 XLOC_000141 XLOC_142312 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_28134 GGTTTAGAGGAGCAGGATGTATCGTGTGAGGGTATCACATTCCCAACCCAGAGATCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19353 AAGAGAGGAGCGTCAACAGCAGCACCATGGGTGAATCTGGACTGGGAAAGTCAACATTAA Variant GeneID:408000|SEPT7:NM_001001168:39_cdna 87^194 3 EMBV3_32617 GeneID:408000 4 GENE SEPT7 CDC10 septin 7 EMBV3_12821 AGGGGCAGGAAAAAGCTGGAAGTGGAAACTGTGGTGAGGAGAGTGTTAACTGGAGTCGAG Gene BVT0102_243751 + 0 NULL GK000011.2:81246333-81977713 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34156 GTATTTAATGTCTGAGGTGAACTGGGGTGTATGGGGTGGGCACTACAGAACATAGTGGGC Gene BVT0102_213469 + 0 NULL GK000013.2:76876374-76879807 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044028 TCONS_00044032 TCONS_00044038 TCONS_00044033 TCONS_00046358 TCONS_00044035 TCONS_00044023 TCONS_00044041 TCONS_00044040 TCONS_00046355 TCONS_00046356 TCONS_00046359 TCONS_00044024 TCONS_00046360 TCONS_00044029 TCONS_00046357 TCONS_00044039 TCONS_00044036 TCONS_00044026 TCONS_00044030 TCONS_00046354 TCONS_00044022 TCONS_00044025 2 XLOC_026098 XLOC_026692 Coding TCONS_00044035 XLOC_026098 Coding Coding NCOA3 13:76761225-76879864 j TSS32439 8589 1 TCONS_00044035_7 1375 22 0.927788735481043 2.09619688556822e-08 1.44700253803379e-11 8.82577223367844e-09 0.000237257903597138 0.00093616793486819 0.000965124385154779 0.000108920626307915 0.00145430636729767 0.000431064882341176 4.14013005319374e-11 6.87283120122682e-06 0.000107593491020474 9.88350160335243e-69 7.35314301410273e-36 2.42759983892044e-22 1.3955898376819e-19 0.00353124532676102 0.00291227876115052 0.000930673304713171 1.18883051622288e-10 0.0003499298345646 0.00280914518837983 3.75140133305361e-21 0.00306513604391479 3.78408065598602e-38 0.000121477673095975 9.75026018125089e-06 1.43093060146882e-07 0.000132648941809881 1.9997150897146e-07 XM_005192502.1 NCOA3 PREDICTED: Bos taurus nuclear receptor coactivator 3 (NCOA3), 0.0 6731 100.00 0.43439282803586 XM_005260565.1 NCOA3 PREDICTED: Homo sapiens nuclear receptor coactivator 3 (NCOA3), 0.0 4901 88.92 0.436604959832344 TCONS_00044035_7 sp|Q9Y6Q9|NCOA3_HUMAN NCOA3_HUMAN Nuclear receptor coactivator 3; 0.0 2414 86.65 0.999272727272727 6 coding 1 1 1 1 -0.012586667349237 0.964189141631295 -0.135054445795279 0.117798259313126 GCGGCGGCGGCGGCGGCGGCGGCTGCTGGCTGAGGAGCGGCGAGTTTCCGATTTAAAGCTGAGTTGCGAGGAAAATGGCGGCGGGCGGATCAAAATACTTGCTGAACAGTGGAGTCAGAGACCAATAAAAACAAACATAAACTGCTTGAACAGCATTTGACTGGTTAGCCAGTTGCTAATGTATATTCACGATGAGTGGGTTAGGAGAAAACGCCTTGGATCCACTGGCCCCTGATTCACGAAAACGCAAGTTGCCATGTGATCCTCCAGGGCAAGGCCTTGCCTGCAGTGGTGAAAAGTGGAGACGGGAGCAGGAGAGTAAATATATTGAAGAATTGGCTGAACTAATATCTGCTAATCTTAGTGATATTGACAATTTCAATGTCAAACCAGATAAATGTGCAATTTTAAAGGAAACAGTAAGACAGATACGTCAAATAAAAGAGCAAGGAAAAGCTATTACCAGTGATGATGATGTTCAGAAAGCTGATGTATCTTCCACAGGACAAGGAGTTATTGATAAAGACTCCTTAGGACCACTCTTACTTCAGGCATTGGACGGCTTCCTATTTGTGGTGAATCGTGAAGGAAACATTGTATTTGTGTCAGAAAATGTTACCCAGTACCTACAATATAAGCAAGAGGACCTGGTTAATACAAGTGTCTACAATATATTGCATGAAGAAGATAGAAAGGATTTTCTTAAAAACTTACCAAAATCTACAGTTAATGGAGTTACCTGGACAAATGAGACCCAGAGACAAAAAAGCCATACATTTAACTGCCGTATGTTGATGAAAATACCACATGACATTCTGGAAGACATAAACACCAGTCCCGAAATGCGCCAGAGATACGAGACGATGCAGTGCTTTGCCCTGTCCCAGCCGCGGGCTATGATGGAGGAAGGGGAAGACTTGCAGTCCTGTATGATCTGTGTGGCACGCCGCATTACCACTGGAGAAAGAGCATTTCCATCAAGTCCTGAGAGCTTTATCACTAGACACGATCTTTCAGGGAAAGTTATTACTATAGACACCAATTCACTGAGATCCTCCATGAGACCTGGCTTTGAAGACATAATCCGAAGGTGTATCCAGAGATTTTTTAGTCTTAATGATGGGCAGTCATGGTCCCAGAAACGTCACTATCAAGAAGCTTATATCCATGGCCATGCAGAAACCCCGCTGTATCGATTCTCTTTGGCTGATGGCACTATAGTGACTGCGCAAACAAAAAGCAAACTATTCCGAAATCCTGTAACAAATGACCGTCATGGCTTTGTCTCAACCCACTTTCTTCAGAGGGAACAGAATGGGTATAGACCAAACCCGAATCCTGTTGGACAAGGCATTAGGCCTCCAGCAGCTGGATGCAACAGTTCAGTAGGCGGCATGAGTATGTCACCAAATCCAGGCTTACAGATGCTGAGCAGCAGGACTTACGGCTTAACTGATGCTGGCACCGCGGGGCAGATGAGTGGAGCCAGGTATGGGGCTTCCGGTAGCATAGCCTCCATGAACCCCGGGCCAGGCATGCAGTCACCATCTTCCTACCAGAACAGTACCTACGGTCTCAACATGAGTAGCCCTCCACACGGGAGCCCTGGTCTCGGCTCCAGCCAGCAGAATATCATGATTTCTCCTCGTAATCGAGGGAGTCCAAAGATGGCCTCACACCAGTTTTCTCCTGTTGCAGGCGTGCACTCTCCCATGGGATCTTCTGGCAATACCGTGAGTCACAGCTTTTCTAGCAGCTCTCTGAGTGCCCTTCAAGCTATCAGTGAGGGCGTGGGGACTTCTCTTTTATCTACACTGTCTTCGCCAGGTCCCAAATTGGATAATTCCCCTAATATGAATATAACTCAACCAAGTAAAGTGAACAGTCAGGATTCCAAGAGTCCCCTAGGCTTGTATTGCGACCAGAATCCAGTGGAGAGTTCAATGTGTCAGTCAAATAGCAGAGATCACATTAACGACAAAGAAAGTAAGGAGAGCGGTGTGGAAGGGTCTGAGAATCAGCGGGCTCCTCTGGAAAGCAAAGGTCACAAAAAGTTGCTGCAGTTACTCACCTGTTCTTCTGATGACCGGGGTCATTCCTCCTTGACCAACTCCCCCCTGGACTCAAGTTGTAAAGACTCTTCCATTAGTGTCACCAGCCCCTCTGGGGTCTCCTCTTCCACCTCCGGAGGTGTATCCTCCACATCCAACATGCATGGGTCACTGCTGCAAGAGAAGCACCGGATTTTGCACAAGTTGCTCCAGAATGGAAATTCACCAGCAGAAGTAGCCAAGATTACCGCTGAAGCCACTGGGAAGGACACCAGCAGTACGACGTCTTGTGTAGAAGGAAACGTCAAGCAGGAGCAACTCAGTCCTAAGAAAAAGGAAAGTAATGCTCTGCTTAGGTATCTGCTGGACAGGGACGATCCTAGTGACACACTTGCCAAAGAGCTCCAGCCCAAAGTGGAAGGCGTGGACAGTAAGATGAGTCAGTGCAGCAGCTCCGCCATTCCGAGCTCAAGTCAAGAGAAAGATGCTAAAATTAAGACAGAAACAAATGAAGAGGGATCCGGAGACTTGGATAATCTAGATGCTATTCTTGGTGATCTGACTAATTCTGACTTCTACAATAATTCCATACCCACAAGTGGTAGTAACCTGGGAACTAAGCCACAGATGTTTCAAGGAGCTAATTCTCTGGGTTTGAGGAGTCCGCAGCCTGTACAGTCTGTCCGTCCTCCGTATAACCGGGCAGTATCTCTAGACAGTCCTGTTTCCGTTGGCTCAAGTCCTCCAGTAAAGAATATTGGTGCTTTCCCCATGTTACCAAAGCAACCCATGTTGGGCGGCAATCCAAGAATGATGGATAATCAGGAAAATTACGGCTCAAATATGGGTGGGCCAAACAGAAATGTGACTGTGAATCAGGCGCCTTCCTCAGGAGATTGGGGCTTACCGAGCTCCAAGGCCAGCCGCATGGAACCTGTGAATTCAAATGCCATGGGGAGACCAGGAACTGATTATAATGCTTCTTTACCCAGACCTGCCATGGGTGGCTCGATGCCCGCCATGCCACTTCGGTCCAATAGCATCCCAGGTGCGAGACCAGTGATGCAGCAGCAGCAGCAGCAGCAGCCACAGCCACAGATGCTTCAGATGCGGCCTGGTGAGATTCCCATGGGGATGGGGGTCAGTCCTTATGGCCAAGCAGCACCATCAAACCAACCTGGTTCCTGGCCAGATGGCATGTTGTCCATGGAACAAGGCCCTCATGGGACCCAAAATAGGCCAATTCTTAGGAATTCCCTGGATGATCTCCTTGGGCCACCTTCTAACCTAGAAGGCCAGAGTGATGAAAGAGCACTGTTGGACCAGTTGCACACACTCTTGAGCAACACAGATGCCACAGGCCTGGAAGAGATTGACAGAGCTCTGGGCATTCCTGAACTTGTAAATCAGGGACAAGCGTTGGAGCCCAAACAGGACGCTTTCCAAGGCCAAGAAGCAGCAGTAATGATGGAGCAGAAGGCAGCATTATACGGGCAGACATACCCGGGGCAGGGGCCTCCGATGCAAGGAGGCTTTAATCTTCAGGGACAGTCACCACCTTTTAACTCGATGATGAATCAGATGAACCAGCAAGGCAGTTTTCCTCTCCAAGGAATGCACCCTCGGGCCAACATCATGAGACCCCGAACAAACACTCCCAAGCAACTTAGAATGCAGCTTCAGCAGAGGCTGCAGGGCCAGCAGGGTTTCCTTAACGCTCAGATGGTTGCCCAGCGCAGCAGAGAGCTGCTGAGTCATCACTTCCGGCAGCAGAGGGTGGCGATGATGATGCAACAGCAGCAGCAACAGCAGCAGCAGCAAACCCAGGCCTTCAGTCCACCCCCGAATGTGACTGCGTCCCCTAGCATGGATGGGGTCCTGGCTGGGCCTGCCATGCCGCAAGCTCCACCCCAGCAGTTTCCATACCCTTCAAATTACGGGATGGGACAACAACCAGATCCAGCCTTTGGTCGAGTGCCTAGTCCTCCCAATGCGATGATGTCATCAAGAATGGGTCCTTCCCAGAATCCCATGATGCAGCATCCTCAGACCGCACCCATGTATCAGTCATCAGAAATGAAGGGCTGGCCGTCAGGAACCCTGGCCCGGAACAGCACCTTTCCCCAGCAGCAGTTTGCCCACCAGGGGAATCCTGCAGCGTACAGTATGGTGCACATGAACGGCAGCGGTGGTCCCATGGGACAGATGAACATGAACGCCATGCCCATGGCTGGCATGCCCATGGGTCCTGATCAGAAATATTGCTGACCTGTCTACGCCATGACGTCCAAGGAAATCACCGTACAAGACACTGCACTAGGATTACCGGGAGTAGTGAATCGTTGTTCTAGGCACCCAGCTTTGAAGAAAGGACCAGCTCCAATCTCCATCAACGGTATTTCAAGTGATGTCATTTGAGCAGGACTGAATTTTAACCTGAAGTGTGATATCTGCCTGTTTTCTTTCCCTCCTCCTATGTATCATGGTGTTTAAAACAAATATTTTTGGCATTCTGCCTTTTGGGGATATGATTCTGGAGGTACGGAGTGTTACTGATCACAAACTGTCCTGTGTCACTTTTTTTCTGCTTGGCTGTCCAGAGTCTTTGGAAAAAATAGAGGTGAGGCCAGAGAACATTGGAGAAATCAAGAGATGAGTTTCTTGATAGTTGCAGTACTGGGTGAAGAGCATGGTCCACATTCGAGGGTTTTTGTCACAGGCTGTCTTATAAAGGTGGCATTTCCAGGTTCTCCTTTAAGGATAGCTCCCAGCCTCCTCTTGGTTGTCCTAGGCTTTTTCCTAAAAAGGGTTTTTATCTGCCCCTAACGTCCTGTAATACTTCACCTCCAGGAATTGTCCTTGGTGTCAGATGGCTTTGCAGAAGGGAAAACAGACGACAGTATTTAATTGCAGCAGTGGCAGTTCTTCACTTGCTGACGTGCAGCTGAGTGCACTTTATTTAAAAAGTAATGGATACATGCAATATTCTCTTGGTCTTGAGGAATGGTGAACCACATTCCTAGTTGTTGTCTAAACTTACCTGTTGGACAAGAACTATGATTTTTGTTGTTGTTATGAAAAGTACTGGTTTCACCCTTTGCCTATATGGTAGAGCAATAATGCTTTTTGAAAATAAACTGCAGAAACCCCAAGGCCAGGTACTGCATTCTGAATCAGAATTTCGCAGTGTTTCTGTGAATAGATTTTCTTTTGTAAATATGACCTTTAAGATTATTGTATGATGTAACATATGTATATACCTTTTTTTTTTTTTTTGTAGGCCACAACAACTCATTTTTACAGAGTTTGTGAAGCTAAATATTTAACATTGTCAGTTTCAGTAAGTTCAGTGTGGTGAGGTTACCAACAGAAGTCGTGCCCTGAATTTTGTGGCCTGGGGTAGGGGCTGCGGCCAACAGGTTTTCCTTGCCCCTAGCCTTAGATGCTCGCTCCTGTTCAGTCTCTTAATCTAAATGCTTTTTAAAGCGATCATTTAAATGTAGGCATTTACATTTTTTAAAAACAATTTCTCTACCAGAACTAAGCACTTCGTTAATTTGGGGGGAGAGAACAGACAAGGGGAAATAAACTTAAGAAAAAATCAAGAATTTTAAAAGATCAAGCAATTTGATTCCAAAGAAGAATGTTGGATTTTTAGGCAGTCCATAAATAGCAAGTCATGGTATATGTATATATTTGTAATTGAACGCGTCATCTTCTCATCCATTTTAGGAGTGCTCTAAGGTTTTGGTTGCTAGGACTTGAATCCCACATTGAGATCTCAGGCGTAGAATCCTTGATGTGTGGTTTCTGCTCAGCTGAAACCACATCTGCTGAGCTGTCTTGTCCTTCTCCTACTGTGATGTCCTGAGAATCGGAGGAAGTAGCATCATGGTTATTCCTAAAGAGTTCAGTCTGCAGAGCAGCCACATTCATGTGATTCGGAGCCAGGGTCTGACTGGGCGCCTTTGTATCCCTCTCCTCCACCACCCCTTCTGCTGCTGCCACTTGTCAGCTGGGAATAGGGAAGAAAGTCAAGTTTGATTCCCTTTACCTAGGGAATCAAGGTAAATCAAGCTTTACCTAGCTTACTTTTTATCAGGTTCAAGCAGTTGAATGAAATGGGGTTTTTAGACTATCTATGATTTTCAAATGTCTGTTAGCCTTGGTGTCATTTCTTAGCAATAACTGAGAGCCAGTTAAATTTTTTTTCATTCATTTAGCCAATCTTTCTAGGTGTCACTGAAGGTAAGATCATTTGATTTCTTTGACTTGCGTATGACCAAGTGAAACCTGTATTTCCAGAAACACCACTAGAGTGGATTTGAGTTTCGCATCCCCCCCACCTGGTTAAAAATAAATCTAAGACTACAAATCCATTAGCTTCCATCCCAGGGGCCTGCACTTTGCAGATAATGCATCCTCCGGTCTGGAGACAGAGGAAGAGCTGAGTAAGAGTCTCTTTTTAGACACAATTGCATCAGGTGTATCTGAACGTTTCTTAAAGTTGCATGTATGTGGGGAGAAATAGAATGGTGCTCTCACCTTTCTTGACTTTAATTAAAAACTCAGTTTTGGTATTCTTTTTCTCAGTCCGTTCTGACTCCAGGCTAAGTGGAAGGCAACACCCCCTTTTTATATGAAAGAAAAGTGAAGTTTATTATAAGTTTTTATATTTTCTACTTGTTCATTGGTGCAAATTTAAGATTTTGATTTTCTTTTAATAGATGGCAGTCTTTGAGATAATTTGTTTTTACCTTAATTCCCCTTTTATTTTTTATGGATAATTTTTTGTATTTCTGCTGCCTACCTCTCCTCCGCCCCGCTCCCACCACTTTTTAAACCTTAGTATCTGTTGGGTGAACAGTATAAGTAACGTTTTCATCTGCTTTTAGAATGTGAGATATTTCCAGTACCTACTTTTTTGCTGAATCCAAAGATATATAAATATAAATATATATATTTTATAAAGATCAAAATGATATAAAGGAGATAACATTTCTTCCTTTTAAAAAACAAATAGAAATCCATTGTTAATGTTCATATTCTGATGCCATTTTTCTAAATCGTGCATCTTGATGGAAAGGTGTAAATATCAGTCAGCAGGATGCTTAATCAGTATTTAATGTCTGAGGTGAACTGGGGTGTATGGGGTGGGCACTACAGAACATAGTGGGCTTGCTGTCCTGTAAGTTCCGTGATCCATGGACTGATGCAGCTGAGAAGGAAACAGAATGGGTTGCCAGTTACCCATATGCCTGTCCAGTTAGCTCCCTTTTTATTTGCAGAAGCCATGCATTTGTTTGCAAGTGGGAAATTCATAGTAGTAAAACTGCTCGGACAGATGAACTGTCCCCTCTGCAGAAGAGCAGGAGCTGCCGTTCAGCTCCAAGGCAGACTGTATAATCACAAGCAGGGTGTTTTCTTTCTCTCTCTCTTTTTTGAAAGGAGAAGATGGAAATGTCATTCTGAGAGCAAGATTTAAATTCTCAGGAATTGACTTACAGTATTGAGAATGAATTCACTTTAAAACAAGTTTACATTAAATGTTGTTTGTAAAAAATCAAAATCATGCTTTACACTGCAGAGAATTCAAACCACATGGGCTAACTTATGAGACAGTTGAGTGGTAAGCTATGACTCCTTTGATCATTTTGGACATCATTGTAAATAAAGGTTTCTATTTAAAATTGAAGGCCAAGAGCGTGCCACTTTTTTTTCCTTTTTTTTTTAAATCCCAGTCGAATTCAGGGTAAAATATAAGAAATTGTGTTTCAGCTAATGGATAAAGGTTTCTGTGAGGGTAAAAGAAATCTTGAGAACCGTGGCCCTCTGCTTACACAAGACAAGTGCCTAGGGGGTCACGTGGTAGGGAGAAATGTGCGGAGCCAGATGCAGTTTCTCTCCCTCCTCCTCCCAGTCTAGCATTCCCACAGCTGCCTTTACTGGTCGGACTGCCTGGTACACGAAGGGCTGGCTAAGGTGAGTGGCTTTGTAGTTGGTCATTATTTTTACAAAGTGTGATCCTAAAGCTGGTGTGATATCAGATAAGGTTCCCAAAGTATGGTAAATTCTAGTCAGTTTATAACCACATATAGCCCTTTTTAAAAAACCATCTAAACCCAAGGTGTCTTCCTTCCAAAAAGATGTTGACTGGTAGTATCTCAAATGCTTTAAAAAAAAAAAACAAAAAACCCAAACACGCCAAAAAACAACTCCCAAGAAATGGCCTTTTAGAAAAATGTCAAAGGTTACCTCATGCCAAGTGCTGGTCATTGGCTGGGCTTTTCAACATTGTATGACAATACGTAGACTACAAAATTCCTTTACAAATACAATTTTGTTAAAACTTGGGGCATACATCAACTTCCTGTCTTTGCAGGACTTTAAAAAACATCAGTTCTGGGACAGATAAACGAAGGAATCCTGGGAGAAATGGCATCTGGTCAGGAAGAGGAATGTCCACAACTGCGAGGGGTTTCTTTTACACGGGCCACACCATTTATTAACACCGCCACTCTTGAAAATTGGGTTTTCT EMBV3_39191 CAGTGCATTATCAGCCAGGTGATCAGTGCATGATCAGGCCAGTGAAGAGTGCATGATCAG Gene BVT0102_090261 + 1 EMBV3_04589 GJ058453.1:1-1004 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23457 TCAGATACTTCACATCCAATCCAGCCTCAACCAATATGTATGTCTTGTGGAGCTTCTCCT Variant GeneID:514191|PARL:NM_001015596:25_cdna 604^666 1 EMBV3_31750 GeneID:514191 1 GENE PARL MGC137354 PSARL presenilin associated, rhomboid-like EMBV3_09890 TCGACGGGCTCATCCTGCACCACCTTTTCCGTATCTTCAACAAGGACCTGCTGGCCACCC Variant GeneID:790892|PARVG:NM_001083805:240_cdna 422^562 3 EMBV3_15357 GeneID:790892 5 GENE PARVG MGC148449 parvin, gamma EMBV3_42534 TAAATTTGTCTCCCACCAGGATGTGAAAGGTCCATCGTCTGCTGAGAAGTGGTACGGGAG Gene GeneID:618855|NUDT3:NM_001082466:173_cdna UTR3_Alt 3 NULL GeneID:618855 23 GENE NUDT3 MGC148951 nudix (nucleoside diphosphate linked moiety X)-type motif 3 EMBV3_12308 TTGAAGAAAGTGAGAGTCGTCCCTCCTACCACTACCTCAGGTGGACTGATCATGACCTCA Gene GeneID:507149|CDK8:XM_002691842:112_cdna UTR3_Alt 3 NULL GeneID:507149 12 GENE CDK8 NULL cyclin-dependent kinase 8 EMBV3_04084 CGCGGCTAAACTCTTGGCCAAAAGGCGGTACTCGTGTGGCGGAAGGGAAACTGCATTAAA Gene GeneID:539430|OSR1:NM_001076916:195_cdna Constitutive 2 NULL GeneID:539430 11 GENE OSR1 MGC142539 odd-skipped related 1 EMBV3_06841 TCTGCTGGATGGAGAATGTGTGTGTTCCTGCCCAAAAGAGTTCAAGGGAGTTGCCTGTGA Gene GeneID:526766|C9:NM_001035364:33_cdna UTR3_Alt 1 NULL GeneID:526766 20 GENE C9 MGC127814 complement component 9 EMBV3_11489 CTTCCAGGTCCAGGGAAGAATGGCCCTGGGCGACTAGTAAAAAGCATAATTGACTTTACT Gene GeneID:613472|GDAP1:NM_001101222:67_cdna Constitutive 2 NULL GeneID:613472 14 GENE GDAP1 NULL ganglioside-induced differentiation-associated protein 1 EMBV3_06635 CGCCTCAGTCACAGGCAGCTTTGGCTTCTGAGTCATCTTCCTTTGAGGGACAAAGTGCTT Gene BVT0102_199435 + 0 NULL GK000021.2:71317467-71321004 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07827 GGCAGCAGGAGAGCAGCCCTGCACCCGAGATGGACAGCCTCATGGACATGCTGGCCAATA Gene GeneID:617132|PCP2:NM_001080328:102_cdna Constitutive 0 NULL GeneID:617132 7 GENE PCP2 MGC148608 Purkinje cell protein 2 EMBV3_36173 TGCTGGTGGTCATCGGCGCCCTCTGCGTGGTCATCATCGTGCTCGGCCTTCTCTATAACT Gene GeneID:532521|PODXL2:XM_002697145:70_cdna Constitutive 0 NULL GeneID:532521 22 GENE PODXL2 NULL podocalyxin-like 2 EMBV3_19171 TATAGGTCACCCCTACCAAAATCGGACCCCCCCAAAGCGGAAGAAGCCGCGCACATCCTT Gene GeneID:539041|TLX2:XM_002691191:110_cdna Constitutive 0 NULL GeneID:539041 11 GENE TLX2 NULL T-cell leukemia homeobox 2 EMBV3_21658 CCTGTCAAGTCTCTTTATGAACAAGTCCACATCCTGTGTCTTCATCCCAATGGCTGACGC Gene BVV0102_043462 + 0 NULL GK000006.2:46155778-46284798 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205079 TCONS_00205082 TCONS_00205077 TCONS_00205078 TCONS_00205081 TCONS_00205076 TCONS_00205083 TCONS_00205080 TCONS_00205084 1 XLOC_124575 Coding TCONS_00205079 XLOC_124575 Coding Coding SEPSECS 6:46250767-46286695 = TSS153236 2692 1 TCONS_00205079_2 504 0.134101040118871 11 0.925376457817241 0.00617535591399085 0.0071562672032045 0.00631255006035489 0.00409911553341367 0.00736806335952401 0.0031178654237509 0.00529671332040987 0.00307817287346246 0.0078381376561805 0.000422050235277319 1.85902579502182e-11 5.1617307494922e-103 0.000385716657698327 0.00169757012242573 0.000945431379198777 0.001304286401464 3.19819781469896e-10 5.6608175470365e-152 0.00772242714619634 0.00512041053503798 0.00241834079489885 0.000844489731800298 0.000217825052254865 0.000545251503653635 0.006672610873092 0.00469225809541894 0.00326730862564202 0.000226664130168191 7.06531709743355e-05 0.000106720349861833 XM_597076.7 SEPSECS PREDICTED: Bos taurus Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase (SEPSECS), mRNA. 0.0 4837 99.96 0.99739970282318 NM_016955.3 SEPSECS Homo sapiens Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase (SEPSECS), mRNA. 0.0 2872 87.52 0.864413075780089 TCONS_00205079_2 sp|Q9HD40|SPCS_HUMAN SPCS_HUMAN O-phosphoseryl-tRNA(Sec) selenium transferase; 0.0 984 94.05 0.998015873015873 1 coding 0 0 0 0 0.0437754470375772 0.71024247660133 -0.000942530699329563 0.985417990338793 GTGAGTCGTCTCCTGGTTCCGGGGTGTATTTGTTGTGTGTCAGTTGTTCTCCGGTCTCCGACAGCTGTCGCCACTACGGACATGAACCGCGAGTTCTTCGCGGCGGGCGAGCGGCTGGTGTCGCCGGCTTACGTGCGGCAGGGCTGTGAGGCCCGCCGCTCGCACGAGCACCTCATGCGGCTACTTCTGGAGAAGGGCAAGTGTCCAGAGGATGGTTGGGATGAAAGTACACTTGAACTCTTTTTACATGAACTTGCAATTATGGACAGCAACAATTTCCTGGGCAATTGTGGTGTGGGAGAAAGGGAAGGAAGAGTGGCATCTGCATTAGTTGCTCGGCGACATTACAGGTTCATTCATGGAATTGGACGATCAGGTGATATTTCTGCTGTGCAACCCAAAGCTGCAGGTTCTAGCCTTTTGAACAAAATTACCAATTCTTTGGTCCTGGACATCATAAAATTGGCTGGTGTCCATACAGTGACCAGCTGCTTTGTAGTTCCAATGGCAACTGGTATGAGTCTAACCCTGTGTTTCTTAACATTGCGACACAGAAGACCAAAGGCAAAGTATATTATATGGCCACGAATAGACCAGAAGTCTTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTGGTGATAGAGAACATTTTAGAAGGTGACGAGCTGCGCACAGACCTGAAAGCAGTGGAGGCTAAAGTCCAGGAACTTGGGCCTGATCACGTTCTGTGTGTTCATTCTACCACATCCTGTTTTGCTCCAAGGGTGCCTGATAGGTTAGAAGAACTGGCTGTGATTTGTGCTAATTATGGCATTCCACATATAGTCAACAATGCTTATGGAGTGCAATCTTCAAAGTGCATGCACCTCATTCAGCAGGGAGCTCGTGTTGGTAGAATAGATGCTTTCGTTCAGAGCTTGGACAAAAATTTTATGGTTCCAGTAGGTGGTGCTATAATTGCTGGCTTTAATGATTCCTTCATTCAGGAAATCAGCAAGATGTATCCAGGAAGAGCTTCAGCTTCACCTTCTTTAGATGTCCTTATTACTTTATTATCACTTGGATCAAATGGCTACAAGAAGCTATTAAAAGAAAGAAAGGAAATGTTTTCCTATTTGTCCAACCAACTAAAGAAGCTGTCAGAAGCCTACAATGAAAGACTGTTGCATACACCTCACAATCCCATATCTTTAGCTATGACACTTAGAACCCTAGATAAACACTGTAGCAGAGCTGTCACTCAGCTTGGCTCCATGCTTTTTACAAGACAGGTTTCTGGAGCCAGGGTTGTTCCTCTTGGGTCTATGCAGACTGTGAGTGGCTACACTTTCAGAGGCTTTATGTCACATACAAATAATTACCCTTGTGCTTACCTCAATGCTGCGTCAGCCATTGGAATGAAGACACAGGATGTGGACTTGTTCATAAAGAGACTTGACAAGTGTTTAAAGACAGTCAGAAAGGAACAAAATAAAGAGAGTGACATATCTGGAGTTGACAATAATGACAAAACTGAAGATGTGGATATAGAAGAAATGGCTTTAAAACTAGATAATGTATGTCTTGACACATGCCAGGATTCTTCTTGATGACATGTGAAGGGTTTCTTTTTGATAATTTGAAAGAAGTGAGGAGGCTACAGTATAAGCTAACAGTTTAAAGACAAAACGTAAGATTTTTGAATTGAGAATTTCATGGAGAATATTTGGTCAAGGAATAGAATATGGTCTGAGCTAGCCATTGATGATTGTTACATTTGTTGTTTTTAGACTGCTTCAATCATTACCATCCTCAACAGGTCATAATATACAATTAACATTTTTCCAATTGTTAAACATTTGCCAATTAAGCATTATGATTCAGATAATTCTTACTAATATGTTGATAGTAAAATTACACATGACCTCTGATTCTCTTTGAAATGTGTAGACTGTGTTCCTCTGACCATTCTCTGTCATTCACAAATTACTTAGTTTCTGACCACACAGAATTTAGAAAGATCACTAATGCTACTATTTACTAGATGTTTGTCGATGTGTGTAAGTCATGGTATGCCTGTAAAATGGATATTTCCCAGGAAAGCAGAGTCAAGGTGTAAGCTTTAATTTTCACTCAATAGAAATGGATCTCAACTTCAGGATGATTTGCTTATATCTAAGAAACATTTGGGGATCTTTTTGATTGTCAAAACTAGCAGAATACTATTGATATCCAGTTAGTGGAGGCCAGGCATGCTGTTCAACATCCTACAATGGGCAAGACAACTTCCCAAAATAAAGATTTATCTAGCCCCAAATCTCACTAGAGCTGTGGTTGAGAAACACTGCTCTAAATTCTCTCGTAGCTCAGTCAGTAAAGAATCTGCCTGCGATGCAGGAGACCCGGATTCGATTCCTGGATGGGAAAGATCCCTTGGAGAAGGAAATGGCAACCCACTCCAATATTCTTGCTTGGAGAATCCCATGGACAGAGGAGCCTGGCAGGCTATAGTCCATGGGGTTGCAAGAGTTGGACATGACTTAGCGACTAAACCACCACCAAAGTAAGAGAACTCCTAAATAAAGAGAAGTTTTCCATAGCAGCTTTACTTATTCACTAGTAACTTAATATAAAGTAGCTCCGTAAATGTTAATGAATTACACAGTATGCAGATTCTTAACTGATAACTGAGGTACCTCTTCTGAG EMBV3_18817 CATGCACGAAGGAGATTATTGAGCTTTGGGTGGCCTCCTTACTCCTTGCTGTTACATGCC Gene GeneID:615596|TSPAN7:NM_001076384:52_cdna Constitutive 0 NULL GeneID:615596 X GENE TSPAN7 MGC139832 TM4SF2 tetraspanin 7 EMBV3_41976 CTCAGTCCACACTCTCTGGGCAATGAGAAGTTACTCGAGATTTGGGATGATCTGGGGTGA Gene BVV0102_154739 + 0 NULL GK000008.2:63105878-63180882 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225618 TCONS_00225609 TCONS_00225605 TCONS_00225615 TCONS_00225612 TCONS_00225617 TCONS_00225613 TCONS_00225607 TCONS_00225606 TCONS_00225619 TCONS_00225614 1 XLOC_137794 Coding TCONS_00225607 XLOC_137794 Coding Coding TDRD7 8:63070979-63174917 = TSS168862 4921 1 TCONS_00225607_4 1098 0.0355618776671408 17 0.952817572183149 0.00159858118573703 0.000918545377634777 0.00097540431331567 0.000244511186336638 6.2322804658412e-63 5.44830651028439e-09 2.09547054607487e-37 5.09606952367415e-06 2.01385236273297e-06 2.05989792279408e-88 5.72566707036202e-20 5.81895413047449e-12 7.94041970204812e-49 5.98626238455571e-100 3.65355934994994e-57 1.00486483857295e-17 3.38490531721971e-12 3.95432374212862e-86 0.00031416735093235 0.00268534649925914 4.79292023798952e-11 9.3183511316172e-16 5.19199409911374e-33 6.49303943727516e-21 0.00452397562739103 0.000369082953212955 3.89329074489075e-05 6.93692708767565e-54 2.09507788148631e-66 1.08722282672086e-83 NM_001100309.1 TDRD7 Bos taurus tudor domain containing 7 (TDRD7), mRNA. 0.0 6608 100.00 0.744360902255639 NM_014290.2 TDRD7 Homo sapiens tudor domain containing 7 (TDRD7), mRNA. 0.0 4998 89.80 0.756350335297704 TCONS_00225607_4 sp|A6QLE1|TDRD7_BOVIN TDRD7_BOVIN Tudor domain-containing protein 7; 0.0 2281 100.00 0.999089253187614 2 coding 1 1 1 1 0.0820169252692924 0.459403617080471 0.0333557416840021 0.569292559870224 GGGCGGGGTCTTGAGGTGATTTCCCAAGCCGCGGCAGCGCCTCAGGCGGTGCGGGGAAACCGAAAGTGGGCGGCTGCTGCGGCTGTGGCCGTGAAGAAGAGGGCGGCGGGAGCCGGGCCCAGAGGCACTGGGACGGGCCGTGGGCCCTCAGGACGAGGTGAAGATGCTGGAAGCAGATCTGGTTTCAAAAATGCTACGGGCTGTTCTGCAGTCTCATAAGAATGGAATAGCATTACCCCGGCTCCAAGGAGAGTATAGATCCCTAACTGGAGACTGGATCCCTTTCAAGCAATTGGGCTATCCTACACTAGAAGCCTATCTGAGAAGTGTGCCAGCAGTTGTCAGGATAGAGACTAGTAGGTCTGGAGAGGTAACCTGCTATGCCGTGGCCTGCACAGAAACTGCAAGAATTGCTCAGCTTGTGGCTCGACAGAGGAGTTCTAAAAGGAAAACTGGTCGGCAAGTTAATTGTCAGATGAGAGTAAAGAAAACCATGCCATTTTTTCTAGAAGGAAAACCAAAAGCAACCCTCAGACAACCAGGATTTTCTTCAGATTTTTCTGTCAGCAAAAAACCTAATTCAACACTATTAAGAAACAAAGGAATCTCTCTTGGAGTTAAATCTGATGCTGAAGTGCTGCCTTACACATTACAAACAACTATTGGAAATGAAGTATTCAAAGATGTTCCGGTGCAGAGTCATATGACCATGTCTACCAACAACAGGTTTAGCCCAAAGGCATCCCTTCCGCCACGTTTTCAGATGCATCTGTCAAGAACCTGTACTAAGGAAATGAGTGATAATTTAAATCAGGCTGTTGAAAAACCAAATGTCACGCCTCCTGCCTCTTACACTTATAAAATGGATGAGGTTCAAAACCGCATAAAGGAAATACTAAACAAGCATAGCAATGGCATTTGGATATCTAAGCTTCCACATTTTTACAAAGAATTATATAAAGAAGAACTAAATCAAGGAATTTTACAACAATTTGAACACTGGCCTCATATTTGCACGGTGGAAAAACCTTGCAGTGGTGGTCAGGATTTACTTCTTTATCCAGCTAAGAGAAAGCAGCTTTTGAGAAGTGAACTAAACACTGAAAAAGTGCCTCCATCCCCACTACCTGCTCCAAAACAAATACCACCACTCAAAGGGTGTCCAGCAGTTATGCCAGGAGACTTTAAAGAGAAAGTTGCAGAGCTGTTGGTGAAATACTCAAGTGGTCTTTGGGCCAGTGCACTCCCGAAAACATTTGAGGACATGTACAAAGTGAAATTACCCGAGGATGCCTTAAAAAATCTTGACTTGCTTTCTGACGTATGCACCGTAGACTACATTTCTGGAAATCCCCAGAAGGCCATTCTCTATGCTAAACTTCCATCGCCCGCTGACAAAATCCTAAAGGATGCAGAGCAAGCACATGGCAATTATGATATCAAGTCTACGGTTGAACAAGAATATTTGCAGATAGAAGAAAACATTGCTGAAAGTACGGACACCTTTATGGAGACTGTGACAATTCCTCCGTTAATCATTCCAACTGAGACATCACCATCAGTCTTGGTGGTTGAACTGAGCAACACAAATGAAGTGGTTATCAGGTACGTGGGCAAAGACTACTCTGCTGCTCAAGAATTAATGGAAGATGAGATGAAGGAGTACTACAGTAAGAATTCTAAGGTCACCCCAGTCCAGACTGTGCAGATTGGCCAGCTGCTGGCTGTAAATGCTGAAGAGGATGCTTGGTTACGAGCACAGGTCATTTCAATGGAAGAGGGCAAGATAAAGGTATGCTATGTTGACTATGGTTTTAGTGAAAATGTTGAAAAGAGCAAAGCATACAGATTGAACCCGAAGTTCTGTTCACTCTCATTCCAAGCTACAAAGTGTAAGCTTGCAGGGTTGGAAGTTCTAAGTGATGATCCTGACTTAGTGAAAGTGGTGGAATCTTTAACTTGTGGGAAGATCTTTGCAGTGGAAATACTTGAAAAAACGGACATTCCACTGGTTGTTCTGTATGATACCTCAGGAGAAGATGACATCAACATCAATGCCACCTGCTTAAAGGCCATATGTGACAAGTCACTAGAGGTTCACCTTCAGGTTGATGCCATGTACACTAATGTCAGAGTGACTAACATTTGCTCCGATGGCACACTCTACTGCCAGGTGCCTTGTAAGGGTCTGAACAAGCTCAACGACCTTCTGCATAAGATAGAGGAATACTTCCACTGTAAGCACATGACTTCTGAGTACTTCGTTTCATTACCCTTCTGTGGGAAAGTCTGCCTCTTCCACTGCAAAGGAAAATGGCTACGAGTAGAGATCACAAATGTGCACAGCAGCCGGGCCCTTGACGTTCAGTTCCTGGATGCTGGCACTGTGACGTCTGTGAAAGTGTCCGAGCTCAGGGAAATCCCCCCACGGTTTCTCCAAGAAATGATCTCAGTGCCACCTCAGGCTATCAAGTGCTGTTTAGCAGATCTTCCACAATCTATTGGCATGTGGACCCCTGATGCTGTGCTTTGGCTAAGAGATTCTGTTTTGAATTGCTCAGACTGTAGCATTAAGGTTACAAAAGTGGATGAAACCAGAGGTATTGCACATATTTATTTATTCACCCCCAAGAACTTCCCCGATCCTCACCGCAGTATCAATCGCCAGATTACAAATGCAGACTTATGGAAACATCAGAAGGATGTGTTTCTGAGTGCCATATCCAGTGGAGCCAGCTCCCCCAACACCAAAAGTGCGAACACCCCCATTTTGGGCAACACTGGAGAGACTTTCAGAAAGAGCCTCACAGATGTCCTCAAGAAGTCTGTGGTCAACCACCCCAGCTCTTTCTTTACAAAGGAACTGCCACCTCCTGTCCACTTATCCAAGCCAGGGGAACACATGGATGTGTACGTGCCTGTGGCCTGTCACCCTGGCTACTTTGTCATCCAGCCATGGCAGGAGATACACAAGCTGGAAGTTCTGATGGAAGAGATGATTCTGTATTACAGTGTGTCTGAGGAGCGCCATGTGGCAGTGGAGAAAGACCAAGTGTATGCTGCCAAAGTGGAAAATAAGTGGCACAGGGTGCTTTTAAAAGGAATCCTGACCAATGGCCTGGTGTCCGTGTACGAGCTGGACTATGGCAAGCATGAATTAGTCAACATGAGAAAAGTGCAGCCCCTGGCGGACATGTTCCGCAAGCTGCCGTTCCAAGCGGTCACTGCTCAGTTAGCAGGAGTGAAGTGTAACCAGTGGTCTGAGGAGGCTTCGATGGTGTTTCGAAATCATGTGGAGAAGAAACCTCTGGTGGCACTGGTGCAGACAGTTATAGAAAACACTAACCCTTGGGACCGGAAAGTAGTGGTCTATTTAGTGGACACATCGTTGCCAGACACAGATATCTGGATTCATGATTTTATGTCAGAGTATCTGGTAGAGCTTTCAAAGGTCAATTAATCACTGATTCTGAGACCTTGACAACTAATTCAGATTTTTTAGCAATAACAAAAATGTAGTAGGCTTTTAAAAAAAAATTACCTCTGCTACATGGCTTTGACTGCTGTGGGAAGTTGAAAAGAATATGCTTTTTTTTTTTTTTTAAGCTTATGTTTGATGAAAGATATTTAACAAGTTTTGTCTTAACAGAGTTGACTTTCAAAGAGAATTGCACTTGAATTACTACTATAATATTAGAATTAAAATGTTTATCAATACAAAAACTGATTATCTTATAATTTCTTGGCTTTATGATCTTAAAGACCCCTTTCCCTTTCCTGTTCATGTTTTCTTCCTTGTTGTGCTCAGTTCTTCTCAAGTTAGCTTGAGAATTTCATGATTTAACCCTGCCTTAGTCTAGTGGTGGGTCCCAAAGCAGGTGGTCACCACACCATGTGAAGTCTCTCCCAAGTCTTCAGCACATCAGCATTACTACTGGTGGTGCTGCTGGAGGAACAGCCCAGGCAAACCAGCACATCCCTCACCCCAGATCATCCCAAATCTCGAGTAACTTCTCATTGCCCAGAGAGTGTGGACTGAGAACCATCTCCCTGCCCAACCGCACTGTCCACTGCTTCTCCCTGCACCAGTCACACTAAACCTTCATCTGGTTCCCAAACCCCATGCGTGCTCATCCAGAACTGCTGATGTTCTAAAGCAAGTCTTCCTCCCCTCCAGACCACTCTTGCTGTCTTCCCTCAGCCTGCAGCTCATTTTGTCTCCACCAGTCTTGTCTGTCGGTATCCTCCCTGACTTCCCAGGCTTATCTGGTTCCACTCCCCGATTCCCCTCCTACTGCATTGTACTTCCAACTCCGCCTCTCATAGTGCCCAGACCTCACTGAGCTTCCTACCATATCAATAGTTGTCTGCACCAATCACTCCAAATAGATTGTGAGCACCTTGAGGGAGGGAGGGAGGGAAGGAGGTATCTTAGCCATCTGTCCAGTCATATCCTGGTAAATATTTGACAACTGGTTCTGCTGGGTATGTGTGGGGATGGGGGCAGTGAGCCTTGATTTGTAGTATCTGATGACCCCCGTGTTATAAATATTCCTACTGTTGTTGAGTTCCAGGTAACAATGTGAGTTGGAAAAAGATGCACCCAAGTGGCTCTTATGAATTCTAGGATGGTGAGCTCAGTTTGACTGGGAAGCTTAAAATTATCATTTTGAACATATACTAAGTTTAGGCTAGTTGACCTCTGTGTGAAGATATGCTTAAATAATTAGAAATATTGAGTGGATTTCAGGGCCAGAGATAAAAATTCTTAAAGTCATTTGCTTATTTTTATTTGTGAACATCTAGGAAAGGTAAGAACAGAAAGAGATGTTTTAAATTTTTCATGTAAAATGTGTTGAAATTATCTTTCTAGCTTTTTAAAATTTACATGTAGTATTTATAATTAAAGTGATTCAAAATT EMBV3_28999 GCCAAATTTACTCTTGAAAGTCTCAGTGTGTACAATCCTTCATCTTGGCCTATCTATGCC Gene BVV0102_261648 + 0 NULL GK000012.2:23717495-23989789 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36349 GCTTCCTGCATGATAGGGAGAGACACAGGAGATGGGAAACTGCTATTCCACAAGGAGTCT Gene GeneID:532053|OGT:NM_001098070:62_cdna Constitutive 0 NULL GeneID:532053 X GENE OGT NULL O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) EMBV3_27916 TCTGGGAAAGAAGGTGCGCGTTAAGTGCAAACGATTTTTAAGGACCATGTGTCTCTGGGG Variant GeneID:614551|UBL5:NM_001037710:8_cdna 249^336 3 EMBV3_10239 GeneID:614551 7 GENE UBL5 MGC127118 ubiquitin-like 5 EMBV3_22336 TTATTGACAGGGCTCCCCAAGAGCAAACAAATCATGACCGTTCGACTTCTGTTGATGGAG Gene GeneID:100337001|LOC100337001:XM_002692130:93_cdna Constitutive 0 NULL GeneID:100337001 13 GENE LOC100337001 NULL ankyrin repeat domain 26-like EMBV3_19977 TGGTCCACGAGCAACCGGTACTGGCTACCCTGGTCTTATGACAATTATCTTACTCCTCAC Gene GeneID:528149|CHSY3:XM_002688967:125_cdna Constitutive 0 NULL GeneID:528149 7 GENE CHSY3 NULL chondroitin sulfate synthase 3 EMBV3_08954 TACCCTCTTTATTTTTGCCGCCACCACCGCCACCAACATCCAGTTCTGAAGATGCAGCCA Gene BVT0102_317001 - 1 EMBV3_22561 GK000008.2:54951362-55837380 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28141 CATCGCACTCCCATGCGAATAGTGAAGCCCGGTTTAATCTTGTGAGAGCTGGTCTTCCAC Gene BVT0102_234063 + 0 NULL GK000010.2:77541595-77832229 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022376 1 XLOC_013046 NonCoding TCONS_00022376 XLOC_013046 NonCoding NonCoding - 10:77831142-77831803 - TSS16266 661 1 TCONS_00022376_2 68 1 0 0.000205835129137766 0.000486458894916431 0.000265999543604748 0.000113067050290101 0 0.00138536195800179 0 0 0 0 3.46321571828154e-06 8.65520550764801e-05 0 4.2698900465243e-05 7.4224096421864e-06 0 0 0 0.00027121574003757 0.000108796364103641 9.18529730153749e-06 0 0 0 2.09636298957989e-05 0.000394374803540901 4.43204208762962e-05 0 0 0 NR_024334.1 FUT8-AS1 Homo sapiens FUT8 antisense RNA 1 (FUT8-AS1), non-coding RNA. 9e-107 390 75.91 0.900151285930408 0 noncoding 0 0 0 0 CTCCCTCCTCCGCCCCATGTTCTCTTTCCCGTACTGAATAAACTTCCGCCTTGGAGGGGTTGTTGCAGCCGCGGGTCGGGGGGAGAGGCCAGGCACCGAACCCAGGCTCTCATGGGGGAGGGGTCTTTCTGTCCGGGCGAATGTGGAAGACCAGCTCTCACAAGATTAAACCGGGCTTCACTATTCGCATGGGAGTGCGATGCCATTCTATGATCGTGTTTTGCAAGCTGCAGTGGAGCGGCCAGACCTGCGCTACGGGGGCTGAGCAGCAGCGATCACTCCTAAAAAGTAGCAAGGAGCCTGCTTCGTATATCCAGTACCAGTGGTACTTAAGGGCCGCGGGCTGAACTGGCACGGGCCGATCCGTTTCCCGGCGGTTGAGAATACGGCATTCCCCGGAGGTGGCGCTCCCGGGAGTGGGGAAGCCCGGCTCCGCTCGCGCCTCCTTCAGCCTTTGGCCTTCAAGCGGTAGAGGGCGGCCTACACTCGTGTCGGAGTCAGCGCCCGTGCGCACAGCGTTGCCGACCCTGCTAGAAGGCTCCCCGTCCCGCTGTGGCCCGCGGCTCAGCCCGGCAGTCGGACGCTGCGGCTACGCGGTCCACGGGCGCGGCGAGAAGGGGGCGGGGAGAAGCCCTGGCACAGGCGGGGGTCGCCGTAGGAG TCONS_00014858 TCONS_00014859 TCONS_00014860 . 3' 24 TCONS_00014858 TCONS_00014859 TCONS_00014860 . 3' 684 EMBV3_20993 GCAGCACGCACAGCCACTTAACATGACTCCCAGCAGCCATTCCCAAGGATCAGAGTTTTA Gene BVV0102_096417 + 0 NULL GK000029.2:41594677-41614572 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165183 TCONS_00165182 TCONS_00165185 TCONS_00165184 1 XLOC_100453 Coding TCONS_00165183 XLOC_100453 Coding Coding EEF1G 29:41613931-41624193 j TSS123444 1942 1 TCONS_00165183_2 392 0.0494335736354274 9 0.811616801481337 3.72334600786171e-17 9.05519641517721e-42 6.95219353828585e-63 1.75806440561418e-09 4.83480632942128e-53 2.74973543789428e-10 0.000213612926797498 2.20755674759735e-05 2.74361784016349e-33 7.60062953772259e-09 6.50630972301952e-05 0.000179172765929828 1.81399069039038e-104 6.97071215651823e-05 1.31113217526365e-30 0.00444511958792943 0.00335903998734797 0.00674634269043407 0.000271379002416644 0.00110146207136033 1.94030243580233e-08 0.00180775371155103 0.0012619430403237 0.00356627515814682 6.25870311951543e-44 4.45868552823173e-34 2.54044155224568e-14 0.000847553883586727 0.000128474047939186 1.93741943711724e-19 NM_001040487.2 EEF1G Bos taurus eukaryotic translation elongation factor 1 gamma (EEF1G), mRNA. 0.0 1588 99.66 0.456745623069001 NM_001404.4 EEF1G Homo sapiens eukaryotic translation elongation factor 1 gamma (EEF1G), mRNA. 0.0 1287 92.21 0.455715756951596 TCONS_00165183_2 sp|P26641|EF1G_HUMAN EF1G_HUMAN Elongation factor 1-gamma; 0.0 773 87.27 0.997448979591837 3 coding 0 0 0 0 -0.116334247050386 0.608410867315896 -0.111877182595057 0.0804891249721158 TTTGCGGCAGCGCGGAGGGCCCCACCCCCTTTCTCTGCGGAATCACCATGGCGGCTGGGACCCTGTACACATATCCTGAAAACTGGAGGGCCTTCAAGGCCCTCATTGCCGCTCAGTACAGCGGGGCTCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCATTTTGGCCAAACCAACCGCACCCCCGAATTTCTCCGTAAATTTCCTGCTGGCAAGGTTCCAGCCTTTGAGGGTGACGATGGATTCTGTGTGTTCGAGAGCAATGCCATTGCCTACTATGTGAGCAACGAGGAGTTGCGGGGAAGTACTCCCGAGGCAGCAGCACAGGTGGTGCAGTGGGTGAGCTTTGCTGATAGCGACATAGTGCCACCGGCCAGCACCTGGGTGTTCCCTACCTTAGGCATCATGCACCACAACAAGCAGGTTCTGGAGCCTTCTTTCCGCCAGGCCTTCCCTAATACCAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTCCGGGCTGTCTTGGGAGAGGTGAAACTCTGTGAGAAAATGGCCCAGTTTGATGCTAAAAAGTTTGCAGAGAGCCAGCCTAAAAAGGACACCCCACGGAAGGAGAAAGGTTCTCGAGAAGAGAAGCTGAAGCCCCAGGCAGAGCGGAAGGAGGGCAAAGAGGAGAAGAAGGCGGCTGCCCCCGCTCCTGAGGAGGAGCTGGATGAATGTGAGCAGGCGCTGGCTGCCGAGCCGAAGGCCAAGGATCCCTTTGCCCATCTGCCCAAGAGTACCTTTGTGTTGGATGAATTTAAGCGCAAGTACTCCAACGAGGATACGCTCTCCGTGGCGCTGCCGTACTTTTGGGATCACTTTGATAAGGATGGCTGGTCCCTGTGGTACTCTGAGTATCGCTTCCCTGAAGAGCTCACCCAGACCTTCATGAGTTGCAACCTCATCACTGGAATGTTCCAGCGATTGGACAAACTGAGGAAGAATGCCTTTGCCAGTGTCATTCTCTTTGGAACCAACAATAGCAGCTCCATTTCTGGGGTCTGGGTCTTTCGAGGCCAGGAGCTTGCTTTTCCGCTGAGTCCAGATTGGCAGGTGGACTACGAGTCATACACATGGCGGAAACTGGATCCCGGCAGCGAGGAGACCCAGACGTTGGTTCGAGAATACTTCTGCTGGGAAGGGGCCTTCCAGCATGTGGGCAAAGCCTTCAATCAGGGCAAGATCTTCAAGTGAATACCTCTTGCCATCGCCCAGCTGCCTGCACCTGCCCTTCGGGGAGAATGGGGGTCATTAAAGGAAACTGAACATTGAACCCTTCCCTGTGCTGCCTCCTTTGTGGGTGATGGCTTCTTCAGAGGGGAGTAGATGTGTTGGAGCAGGGTTCTGTCTGTGCCTGCAGGACCTCCCTGCGCAGGAGAGAAGTCTTCAGAAGAGCAGAGAGGCCGCTCCTCAGTTTTTGTTCTACTGCGTTGCTTCTTCCATGATGACCATCTTCTAGCCTAGCTGGGAAAGATTGGATGTAGTTAGGAGGTGGTGACACGGGGCTTTGTAACTACCTAATTCCAGACCCTCCCCTGTGACAGGGGAGAGTACCTGCTGGTGGGGTGAGAGCGCAGCACGCACAGCCACTTAACATGACTCCCAGCAGCCATTCCCAAGGATCAGAGTTTTAACACTTCAGACCAACAAGACAAGGCACAGACTCCTTGGAACAGATAACTGGCCTATGGGCCCAACTTGGCAGCGGATCGTCTCTGGGGTATCCCTACTTTCTCACAAGGAAGTGGGGTTCCAAGATTTAAGTAACTTGCCTGTGATCACATGTTTTAGGTCGTGGAGGCAGAATTTTGAACCCAGTGGGTGTCCCTGGATCCTGTAGCATAAACACACCCTGCTGCTTCCTGGAATGTAGAGCAGTCATAAATGCCATTTAACAACCCTGCTCAGAC EMBV3_27190 TGGTCCAGTGGTTAGGACTCCACGATTTCCACTGCTGAGGCCCTGGGTTCGATTCCTGAT Gene BVT0102_191285 + 0 NULL GK000017.2:65104916-65154253 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081486 1 XLOC_050365 NonCoding TCONS_00081486 XLOC_050365 NonCoding NonCoding - 17:65123803-65124325 - TSS61426 522 1 TCONS_00081486_2 66 0.71264367816092 1 0 0 0 0 0 0 0 0 0 1.51152080566035e-05 0 0 0 0 0 0 0 0 0 0 0 1.93852176427376e-06 0.000369612442262619 0 0 0 0 0 0 0.0002046000212329 0 XM_005221836.1 RCCD1 PREDICTED: Bos taurus RCC1 domain containing 1 (RCCD1), transcript 1e-21 107 81.65 0.206896551724138 XR_250706.1 LOC440570 PREDICTED: Homo sapiens uncharacterized LOC440570 (LOC440570), 3e-11 73.4 83.12 0.145593869731801 0 noncoding 0 0 0 0 -0.0129961734795812 0.918501004523188 -0.0120526844815513 0.814415422141157 GACACATGCTCAATAAATGTCAGCTACTATTATTAGTGCTCATATTTAGTTATTTACTATTGTGTAACAAGTTACCCCAGAGGAGTCCCTGGTGGTCCAGTGGTTAGGACTCCACGATTTCCACTGCTGAGGCCCTGGGTTCGATTCCTGATCAGGGAACTAAGATCCTACAGGCTGCACAGTGTGGTGTGGCCAAAAAAAAAAACAAAAAACAAACCCAAAACGTTGTCTGATAATTTATACATGTGCATTTTTGCCCCACACAAACCTCCAAGTTACTGAAGAACTTAGTGGCTTAAATACATATTACCTCACATAGTTCCTATGGGTCAGCTGGAACAGCTTCGCTGGACGGTCCTGACTCTGTCTCTCCTGAGGTTACAGCCAAGCTGTCGGCCACTCATCTCAAGCAGTTCACTCCTGAGGCTGGCGAGGCGGTGCTGGCTGTTGGCAGGAGGCTTCAACTTCTTTGCCATCCAGATTTCTCCACAGGGCTGCTTGAGAGTCCTCATGGTGTGGTGG TCONS_00077843 . 5' 18879 TCONS_00077843 . 5' 18879 EMBV3_34300 CTACTTTTAGCTCTGGAAGTCCGGTGTCATGAGAAATCCCTCAATGCCTGTCAAGCGGGA Gene BVV0102_239156 - 0 NULL GK000011.2:99384153-99411392 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034059 1 XLOC_020292 NonCoding TCONS_00034059 XLOC_020292 NonCoding NonCoding - 11:99390694-99391868 - TSS25058 1174 2 TCONS_00034059_1 94 0.314310051107325 1 0 8.11241303244732e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000134982518239236 0 6.41163035826929e-05 0 3.06278355001348e-06 0 8.42780173557962e-06 0 0.000192779049589461 0 0 0 0 0 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 6e-43 179 93.28 0.100511073253833 0 noncoding CAAAAAATAGTAATAATAGTAAATAAGTAAATATTCGAAAAATTGAAGACGAGGTCTCACTGGATCAGCGTGGACCATTGCCAGTACAGTTTGTTTCCTTGTAAGAAGAGAAAAGAACACAGACACACGGGAGAAAGTTCATGTGAAGACAGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCCGTGTGACCCCACAGCCGGCAGCCCACCGGGCTCCGCTGTCCCTGGGAGTCTCCAGGCAAGAACACTGGAGTGGGTGAGGCAGAGACTAATGTGTCTACGAGCCAAGGAACACCGAGGACTCCTGACAGCACAGAAGCTAAGAGAAAAGCATGGACCAGATTCTCCTCCTCTAAGCTAAGAGAAAGCATGGCCCCAATAACACCTTGATTTTGGACTTGCAGCCTTCAGAACCACCCGCTGTGTGGTACTTCGATACAGACGGCCAGGAGACTAACCCAACCGGACACTAGAGGGCGCTGGGGGCACGGCCCCTGAGGGCAGGAGTTCTGGCGGGCTCCTTGGAGGGCGCGGCCTTCAAGCCCAGTCCCAGAGGAAGGGAAAGGATGCCAGGCGGTGCAAAGGCCCATGGGGGCGAGCTGGGAGAATCCAGGGGCTGGGAAGTCAGTCAGAGTTCACCCTCCAATTTACTCCCTGCGGCTAAGAACCGAAAAAGGGCAGTGCGATTATTATCTGAGGAGGGGCATTCCACCCTGTGTCTGGGGGAAAGTGCCCGCCTGCTTCAAGTCCCCTCAGCAGAGGATGGGAGGCACAGGGCCTGGTGTGAGCCCAGTGCTGGCCTTGGAGGGCACAGCCGTGCCTGTTCTGGGGGGACCCATCATCCCGCTTGACAGGCATTGAGGGATTTCTCAGGACACCAGACTTCCAGAGCTAAAAGTAGCACCATCCTGAGAGAACGGGGATGGGTGGTCCCCTTAGACGGGCCGAGTGCAGGGGTGCCTGCTCCCGTCCTGTGCCTGAAACCCTGCTGACTCCCCAGATGGACTTAATCTCAGGGGAACCCCCCTCCTCGACCACCTCCTGACCACTCGGTTCAAAATCTGCGGGTGCCTGGTAGGCTGATCCTCTCTCTGACGTGGTAGCCCACAGCCCTTGATGTCTATCAATTCTGGCCTTTCTCCTAAGGTGGCTACGCCTCCTC TCONS_00029102 . 5' 6543 TCONS_00029102 . 5' 6543 EMBV3_19268 GAAGGATAGTGCACCAAATACTTTATCAGACCTCACGACACAAGCGCTAAGGCTCAATCC Gene GeneID:526704|VNN1:NM_001024556:8_cdna Constitutive 0 NULL GeneID:526704 9 GENE VNN1 NULL vanin 1 EMBV3_11081 GATGTGTTCCCCCTGACTTCGATCATAGCCATAGTTCACATCTTCGGGAAAGTGGTCCTG Gene GeneID:539153|SLC16A14:XM_002685673:454_cdna Constitutive 0 NULL GeneID:539153 2 GENE SLC16A14 MCT14 solute carrier family 16, member 14 (monocarboxylic acid transporter 14) EMBV3_28416 CTAAATTGACATGAGATCAATAATTCCCTGGTGGACCAGTAACTGGGACCCGGCGCTACC Gene BVT0101_064349 + 1 EMBV3_05217 GK000018.2:61145923-61185953 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41991 CCCAAGATGAGGTAAGCTCTTCACTACTGTGCTAAATAAAATGGGGTGAGTGGGTCCCGG Gene BVV0102_422449 + 1 EMBV3_13960 GK000018.2:48326745-48337458 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090591 1 XLOC_055371 NonCoding TCONS_00090591 XLOC_055371 NonCoding NonCoding - 18:48332314-48334730 - TSS67937 2416 4 TCONS_00090591_4 70 0.459023178807947 1 0 0 0 0 0 0 0 0 0 0 0 9.47508789085668e-07 0 1.18761618745914e-06 3.11523272398629e-05 0 0.000634054428974427 0 0.00027001781970725 0 0 0 0.000132073100622744 0 0.000215109161461757 0 0 0 3.97565198365174e-06 8.03742624030869e-06 0 NM_205808.1 KCNRG Bos taurus potassium channel regulator (KCNRG), mRNA. 3e-25 122 71.37 0.0951986754966887 NM_020459.1 PAIP2B Homo sapiens poly(A) binding protein interacting protein 2B (PAIP2B), mRNA. 2e-07 62.6 71.63 0.0554635761589404 0 noncoding 0 0 0 0 0.0545902749079023 0.771355895791164 -0.00662765355651993 0.907569814816529 GAGATCGCAGGCCAGCTGGGAACTGTGTCCTACAAAGGAGAAGGCATTGCTAATACCCTTAGGACCAAGTCATTTTAGGCGAAAACAATGAGGAAACAAGCAGGGGAGAGCGGTACCGTAGGATGCCAGGAGCAGGCAGGGCCTGGGGAGGACAGGCATAAGCTACCGTCTCTGCTTCTGTTAGCCATGGAAGATGAGAAGTGAATGACGGGGAACTCTCCCTCCAAAGAGCAGGTGGACGTGGTCTTGTCTCAGAAGCCCACACCTGTGTTTTTCATCCAAGCCTTTACATCCACCTTCCCAGCTTAAATCTCATCTCCCATTTGTAATCCCTCCAGAGTAGACGAGTAAGGGTCTCTCACAGCCCATTGATAGATGGGCTCCTTATCCCATTTCTCTTTCTTCCTTTCAGTAATAAAAGTCCCCAGATTTTAGCAGGGACGTGGCTGCCCAGCGCGAACTCTTATTTCCCTCTCTTGCAGTTGAATGTGACCAGGTGAATAAATTCAGACTGAAGGGGTGTGTGATGCCTCCAGGTCATCGGGTCTAAAAGGAAGTGGTGAGACTTCCCTGGCAGTCCAGTGGTTAAGACTCTGTGCTTCCACCGCATGGGGTGCAGGTTGCAATCCCTGTTCAGGGGACTAATGCTGTGTGCCAAGTGACACAGCCAAAGAAAAAGTCACAACGTGTTTAATGTATGTGTGAATGGCCATTTGAGATTAGCCAAATTCCTACAGAAAAGAAAAAAGGAAGCGGCGTGCCCTCCACTTTCCTTCCCTTCCTGGGAAGCAGATGGTGGGTACCAGCCTCCCCAGGGGCCTGGGGGCGGCAGCCTGGAGGGATGCAGAGCACCCAGACAGGGAACCTCGTTCCTGGATGACCTCACAGAGCCACCCATCACCTGCTCTGGACTCCCACCAGCTCAGGCTCTTGCTGGAGAGAAAAGTGAAGCTCTCTCGTCAAGCCTCTGTCTTCAAAGTCCCTGTGAAAGCTGCCACATCCTAAATGTATTGTGATGAAGCGAACAGGTGGGGGTCTGGAGGCCCAGTCCAAGGTCTCCCGGGACCCACTCACCCCATTTTATTTAGCACAGTAGTGAAGAGCTTACCTCATCTTGGGTCTGGAAGGTCTCACACTGCTGCCCCACTCCCTACTAGCCCAGTGTCCTACAGTTCCTTTTAGGGCTCAATTACATATACTGTGGGGATTGTGTTATCAGTTTCATAATGAATCATCAGACTGTGTGTAAGGATCACAGTTAAAACTAACATTTATGACTTCCTTCGTGGTGAAGTGGTTAGGAATCGACCTGATAATGCAGGGGATGGAGGTTTGATCCCTGGTCCCGGAAGATTCCACAAGACAAGGAGCAACTCCACAAAGCCCGTGCTCTGCAACAAGAGAAGCCACCGCCACAAGAAGCCCAAGCACCTCAACCAAGAGTAGCCCCCACTCGCCACAACTAGAGAAAGCAACAAAGACCCAGTGTAGCCAAAAAAAAACAAACCACACCCAAAGAAGCCACCAACATTTATCAAATATCTGTTTACCTTGTCCCAGACAGGCTCCGTGCAAAACCATTTGCCTTGTGAGGTAAGTTCCATTTGACAGCGGAGGCCAATGAGGGCCAGTGACTGACCAAATGGTCCACAGAGCAGTAAGGGGTAGAGCGAAGATACACTGAGCTCACAGCCACTCTAGGCTTGCTCAGACCTGCGGACACCACACTGCCCAGCAGCAGGTCGCCTAATTGACCAAATGATAGGGAGCACTGACTCTGAGTCACACCGTTTGGCACTGAGCAATGAAACCCCCACCCTCTTGAAACTTCTGTTCTGCCGGGAGAGACAGACACTGCCTCTCATATCCTGCATGTGGTTGTCGGCAAAGCCACAATCTCCATTCACCTCCTCTTCTCACTCAAAGACCAAATATCTTTGATTACAAGACATTTCCCTCACACAGCCCCCCTGCCCCGGCTGTCATCTGTCCTCATCTCCCACCTCTTTCCCTCCAGCTCTGCAGGCTCACAGGCCTCAGGGCCTTTGCACTGGCCATTCCTTCTGCCTAGATATGCTTCCCTGTGCTTGCGTGGCTTATTTTCTGACCTTCAGATCTTAACAAAAAATACTTCAGTGTGGCTTTCCTGGTAACTCATCTGAAATCCAGTGCCTCCCAAACATACTATGTACTTATTACCTAATTCCCTTTCTTACTGTATTTCTCCTAATACATATTACTTGAAAAAAATCAAGCTGTTACCGGTTACATAAAACCCATTTCAAATATCCAAGGATTTTTAGTAATTTTACCAAGTGGTGCAACTATCACTATAGATCTGTTTTAGAACATTTTCATCGCCTTCACGGAGTAAGATCCCTCATGGCCAATTTAGAGCTAATCACCATTCCCACAC TCONS_00083649 . 5' 2096 TCONS_00083649 . 5' 2096 EMBV3_08616 CCTCCTGACCTACGTCCTGCAGAGGCCTCACAAACTTTGGCCTGTTCAATTCTCACTGCA Variant GeneID:506392|XPO4:NM_001098889:17_cdna 324^462 1 EMBV3_34648 GeneID:506392 12 GENE XPO4 MGC157258 exportin 4 EMBV3_21235 GCCAGGGGTGGGCATGCTCTTGTTTGTGTGAGAGGAAGATGAATGCAGAAGTCCCTGTAA Gene GeneID:540595|BMP7:XM_002692423:399_cdna Constitutive 0 NULL GeneID:540595 13 GENE BMP7 NULL bone morphogenetic protein 7 EMBV3_18020 GGCCAGTCCCAAGCCGAATAGGCAGAAGTACTGGTCTCTGTTTAGGGCTATAATTCCCAG Gene GeneID:530509|SLC26A8:NM_001102130:44_cdna Constitutive 0 NULL GeneID:530509 23 GENE SLC26A8 MGC152160 solute carrier family 26, member 8 EMBV3_04559 CAGGAAGAAGCACAATTTGAAACTAAAAAGCTTTCGTCAGGAGTGATAAACCCAAGCTAT Variant GeneID:614360|SEP15:NM_001034759:92_cdna 169^232 1 EMBV3_13451 GeneID:614360 3 GENE SEP15 NULL 15 kDa selenoprotein EMBV3_34137 GGTTCAATGAGATCAGACACGCAAATAAACTACAACAGTGCCCCGGCCAGCAAGCATGAG Gene BVV0102_173384 - 1 EMBV3_07275 GK000018.2:62521683-62537350 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087524 1 XLOC_052518 Coding TCONS_00087524 XLOC_052518 Coding Coding - 18:62529713-62536032 - TSS64986 2220 2 TCONS_00087524_7 95 0.690990990990991 2 0.648939537828427 0 0 4.16846064314631e-06 0 0 0 0 0 0 1.68488516868712e-07 0 0 0 0 0 0 0 0 6.13728549736809e-05 0 0 0.000257383490929422 6.61191804705281e-05 9.06196747721975e-05 0 2.60238373792729e-05 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 2e-128 464 82.08 0.208558558558559 0 coding 0 0 0 0 0.000934047959318285 0.993486804119802 0.0252435755238062 0.603401186802527 ATGAGAGTGATGGTTACTAACTCATGCTTGCTGGCCGGGGCACTGTTGTAGTTTATTTGCGTGTCTGATCTCATTGAACCCTGGAAACAACCCGGTCAGGTGGATGTTATGAGGTTCCTCTCTGGACACTGGCAGTTATTCAGTATGCTTTGGTTTTTTGAGCACCTTCCTTGGTGACTCAGTGGTAAGGAACCTGCCTGTAAATGCAAAAGACTCCCCTTTGAGCCCTGGGTTAGGAAGATCACCTGGAGAAGGACATGGCTATTCACTCCAGTATTCTTGTCTGGACAATCCCATAGGCAGAGGAGCCTGGCGGGCTATGGTCCTTGAGGTTGCAGAGTTGGACAAGACTTAGTGACTAAACAGCAACAGCCCTGTGGCAGGCAGGATGCTTTGGGGATACAGCTGAGAGTAAAAGGGACAAAATCCCTGTGCTCAGGGTGCTGACAACCTCGTGGGGAAGCCAGACAGTAAACAAAGTACATCATGTGAAATGCCACGCTGGGGGAATCACAAGCATCAGCCTGGAGAAGTATCAACAACCTCAGAGATACAGATGATACCACTCTAATGGGCAGAAAGCAAAGAGGAACTAAAGAGCCTCTTGATAAGGGTGAAAGAGGAGAGTGAAAGAGCTGGCTTTAAAAACTCAACATTCAAAAAACTAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGGTTGGGAAACAGTGGAAACAGTGACAGACTTTATTTTCGTGGGCTCCAAAATCACAGGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTGCTCCTTGGAAGAAAAGCTATGACGAACTTAGTATATTAAAAAGCAGAGATATCACTTTGCTGTTAAAGGTCCCCATACTCAAAGCTATGGTTTTTTAGTAGTCATGTACGTACGTGAGAGTTGGACCATAAAGAAGGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCTGACTCTCTGCGACCCCATAGACGGCAGCCTAGCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCTGAGTGCCACATAATTGCTGCTTTGGAATTGTGGTGCTGGAGAAGACTCTTGAAAGTCTTTTGGACAGCAAAGAGATCAAACCAGTCAATCCTAAAGGAAATCAACCCTGAATAGTCATTGGAAAGACTGATGCTGAAGCTGAAGCTCTGATTCCTTTGGCCACCGGATGTGAAGAGCTGACCATTGGAAAAGACCCTGATGCTGGGCAGGAGGAGAAGGGGGTGATGACAGTGGATGAGATGGTTGGATGGCATCACCAACTCAGTGGACATGAGTCTGAGCAAACTCAGGGAGATAGTGAAGGACAGGGAAGCCTGGAGTGCTGCAGACCATGGAGCCCCAGAGTCAGACCCTACTTAGTGACTGGACAACAGTGCCTGCAGTGGATCAGGTGCTCCCTCTAGTGGCAGCGGCAGTGAACCGCGTTGGCTGGCTCTCATCTTGCTCCAAAACCCCAGACTGCAGGATTGACTTCGCCTTGGATAAAAACGTACTTTAGCTGCCAGAGGCTTCCTTAAATGGCTGTAAAACTGACTTCTCTGATGCGCTGCAAGATTAAATAGAACAATGCCTGATGCTGGCGACTGTGGGAGCAAATGAGCATTCTCACATACATGGGCTTGGCAAGGCTTTAGGAACTGCATCTTGGCATCATGTAGCAAGTCTTAAAAACACACCTCCCTCCAACCCAAAAGTTCACCCTCCTAGGAGCTCATCCCAGAGAAAACTACGTAAATGCTCCATGTGGCGTGCAAAAACATATTCCTCAAAGCATTATAGTGGAAAATGGGAAAACCCCAGATATCTACTGGTGGGGACCGAAATAAAAATTATGCTGCTCCTTGGACTCCAAAACTCATGAAAGATACTGAGAAGCTGTTCAAGTCTCGAGAGACACAATAACTACTTACAACACCTAATCCCAGGGTTTAGGGGGATTTTCCCAGGAGCTGAAAAGAGAATTGCTCCAAAGGACAATATTGGGACAGTTGGTGAAACTTGAACATGGACTTCATCAATGTTAAGTCCTTGATTTTTGATAACTGTACTGTAACTCTGTAAGAGAATGTCTGTGTTTTTCAGAAATGTTCCTTAGGAGCTGCTCACCCTCAACTGTCTTAAAAAATATTCATATGGGAAGAAAACTGGAAAGCAGTGTAATGAAATGCTAACAATTGGTGAGTTG TCONS_00084705 TCONS_00084706 r 5' 5896 TCONS_00084705 TCONS_00084706 r 5' 1319 EMBV3_37751 TATTGGTCCTTTTAGAAGCACAACCTGCTTGTGCATTGCTTACCCCAAGAGGGGCTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14028 TACCACAAAGCACATGACTCCCTTCAACGTAGCCACAGTGGGAGATTTGGATGCCTATCC Gene BVV0102_141408 + 0 NULL GK000024.2:51815937-52093908 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36492 CCCCAGAATGAAGACTACAGAAGCCCGTGAAGAACTTACAGCCTGCCTGACATCATCTTG Gene BVT0101_017515 + 0 NULL GK000009.2:95272736-95289914 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36456 CCTCTATCTGTTCCTCTCAACCCCCAAACTCCAGATCCTTCCCATTCCACACCGTTTAGT Gene GeneID:512027|SIT1:XM_002689697:149_cdna Constitutive 0 NULL GeneID:512027 8 GENE SIT1 NULL signaling threshold regulating transmembrane adaptor 1 EMBV3_13538 TCTATGATGCCTTCGTGGTCTTCGACAAGGTGCAGAGTGCAGTGGCTGATTGGGTGTACA Gene GeneID:282602|TLR9:NM_183081:61_cdna Constitutive 0 NULL GeneID:282602 22 GENE TLR9 NULL toll-like receptor 9 EMBV3_11645 GAATTCTACAGAAAGCAGAGACAGACTCCTACAGTCAGGCAAAGGCGACACCAGCAGCAT Gene BVV0102_141913 + 0 NULL GK000011.2:10481563-10489731 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024041 TCONS_00024040 TCONS_00026893 TCONS_00024039 2 XLOC_014423 XLOC_015138 Coding TCONS_00026893 XLOC_015138 NonCoding NonCoding MOB1A 11:10480925-10483926 x TSS19196 1830 2 TCONS_00026893_4 63 2 0.390666666666667 0.00397398874991383 0.00566592287479206 0.00516931831969376 0.00300084321791422 0.0030075218910195 0.00191970053002478 0.00229254469658316 0.00528267300822331 0.00494068326950577 0.00155864231213739 0.000839147908817508 0.00122425746451535 0.000251989333626693 0.0015114855633748 0.000794654911439652 0.0158963473679617 0.0050458110625758 0.00732307264817922 0.00869226398588982 0.00438589369503869 0.0027992336294923 0.0100856841745526 0.0051739061722376 0.0106047434987741 0.00502534671164163 0.00425894860845484 0.00330584001158503 0.0020931707430427 0.000734993951566058 0.00265424773193222 XM_005212455.1 MOB1A PREDICTED: Bos taurus MOB kinase activator 1A (MOB1A), transcript 0.0 3178 99.94 0.963934426229508 XM_005264399.1 MOB1A PREDICTED: Homo sapiens MOB kinase activator 1A (MOB1A), transcript 2e-57 228 70.32 0.285792349726776 0 noncoding 0 0 0 0 0.00464379483248398 0.967077060968824 0.0191615281619208 0.704271819778606 GATAATCAAGACTAACTTAAGCAAGTTATTTTCAATGTAGACCAAACATAGAATGTTGTCCTATAATAAATCTATAGCACACTGGTAATCCATTCGGATTTACAGAATACTTGTTTGAAACAGAATCTGATGAGAGAAAACCCAAGTGAATTTCAATGCAGTTGCTTCAGTAAAATTACTGCTACCACAGATAATATCATCCCCCAAAGCCCATTACAGTCTGAAATATCAAAATCTAATGCAAAAGCACAGGAAGACTGAAGAGCTACTATTTTCCCTCTTTGCCAGAATTGTACAATAGTTTAAAACCAAGTCCTGAACCAGTTACTGAAGTGGTATTAGGAGGAAATAATGTCCCTATTGAAGCTGCTTAGTTTGGTGTCCCAGCTAGTATTTTCAGGCCAGAATTCTACAGAAAGCAGAGACAGACTCCTACAGTCAGGCAAAGGCGACACCAGCAGCATGACTAAAGCTGCTTAGAAACAAATGTCTAGGACTTACACTCTTTGGGAGTGGTTTGTTTATGCGTATGAGGTAATGATGTAATGTTCAGAAGCTTCTCCACTTCTAATGTGACCTCACTGCTCAGAGAGAGGGCCAAACAGCATTATCATGAAATCTCAAAAATATTTGAAAAATTAATGTCACCATGAGGACTGCTCCTCTTGCCTCTGCTCTACTAGAAAAACTTTCCTTTTGCTGTTATCAATGTCATGATGAATACAGATGTGCATTTCTCAAGTAGGCAGCTACATGAGCTAAGGATCTACAGGTCTTAAGATGAAAGGAAATACTTTGTTAACTGGCAGCCTACTGAAAACCACTTTTTTCACAGTTTGGCAAAGAATAAAGGAGCCATTTGATTGTCAATACAAAAACTGTAGTACAAGGAAGTTTCACTATTTAAACAAAAATCTGCACATCATTGTCCAAAAGTTTTTTTTTAAAGGCCTGGAAATTAAAGCACCATAGGATTAACTGCATAATTCAGCAAGTACTAGCCAACCATGATTTTAGTCGGGTGTGAAGAGCAGTGATGAGACACTGAGAGAGGACTTCTGATTAGGAGGAGCCAGGGGAGTGAATGTTACTCAGGGAGATAAATCAAGATCGAGAGGAGTCAAAGAAAGACTGACTCCGTCCAACTTTAATCAAAGGCTGGCCTTCCAGCCAAGCCAAGAAGGTGCTCTCTTCTCCATGTTCTCTGCCCTTTGCTCCATCTCTCCTGTTCACTCCCTGGCCTTGGATGTAAATAATGTTAACACTAATGTTTGGTTGCACTGTTGGTTAAGCCAGATTAACTGGGAATGCTTTTTTTTGGTATTGCTTTTTTTTTTTTTTTTTAAAGGGACATTTTGAATTACCTGAATTCTTAATTACCAACAAATTTTAAAATTTATGTCCCATTATTAAGCTGGCTCTACTATTGTTAATTTAGTTGCTTAGTTTTAGGGCTCTAAGTCATGAAGAGAGGGAGGATTTCTACCACTGAAAATAAATGAAAGAAAGTAAAAATACTTTTATTTGATGATACTTGAAATATTAGAAATGATAAAAATATAATCTTACTTGAGAAATATTTCATTCCTAGCAGACTTAATTAAAGCCAACACTGTTCAAAGTCAAGAGGCAGTAACATCCTAACATTCTAAAAACCTTCTTGTTTGGAAATGATCAACATAAACATACAGAATGCCTGATGGTTCTTTTGGATAATCTTAAAATGAAGATTATAGAATGTTCATAGAGGACTTTTTTAAATGAGCATACAAACTTCAAACTAAAAGGTTATCCAAAGTGACACAAACGTTTTTAATCTAATTTCAAAAC TCONS_00024042 TCONS_00024041 r 5' 0 TCONS_00024042 TCONS_00024041 r 5' 0 EMBV3_23938 CTTGGAGAAGCTGCTGTTGGTGGATCTGGAGATCTGCTTCCGGGCATTGTTCGGGGAGGT Gene GeneID:100295904|LOC100295904:XM_002697603:82_cdna Constitutive 0 NULL GeneID:100295904 23 GENE LOC100295904 NULL hypothetical protein LOC100295904 EMBV3_17325 CTTGCCCTACTACAGGGCCACCAAGCTCCTGACCCAAGGATTCAACTTTCACTTCCTGGA Gene BVV0101_013305 + 0 NULL GK000022.2:7992812-8092180 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17609 GGTCTTGACCCCCATGTGTTTTGCAGGAGTGTGTAAGCATGGGTAATGAGAACAGGAGGG Gene GeneID:533677|STK38:NM_001081602:53_cdna Constitutive 0 NULL GeneID:533677 23 GENE STK38 MGC155151 serine/threonine kinase 38 EMBV3_24829 ATGTCCTAAGGCAGTGCCCCATAAGATTCTAGGTGGGTGAGAAGCAGCCTTTCTTCTGAG Gene BVV0102_079944 + 0 NULL GK000016.2:2103326-2117056 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066587 TCONS_00066590 TCONS_00066591 TCONS_00066584 TCONS_00066583 TCONS_00066586 TCONS_00066585 TCONS_00066588 TCONS_00066592 1 XLOC_041220 Coding TCONS_00066584 XLOC_041220 Coding Coding MDM4 16:2065900-2106819 = TSS50270 5508 1 TCONS_00066584_2 491 0.315722585330428 11 0.865658145559411 0.00192271022520786 0.000888755839886508 0.000709756705599743 0.000724285946108199 0.000981886184586809 0.00078417706324579 0.00087851614214686 0.000672276066759409 0.00137624487866562 2.85658458702983e-11 8.07515295925362e-17 3.48291117454814e-07 4.41878698517039e-05 7.6530190711014e-05 1.04655772369581e-10 1.00570559313956e-12 1.18272987634136e-08 5.08852434055864e-11 0.000869253608985494 9.03555933563478e-05 2.79057309069425e-05 2.45334194884044e-23 5.40102460179034e-09 1.38976727825894e-06 0.00012195396705347 1.07712249936297e-07 3.36212335748036e-08 7.74225920016774e-12 1.6524344350434e-23 2.23601379983056e-21 XM_005216669.1 MDM4 PREDICTED: Bos taurus Mdm4 p53 binding protein homolog (mouse) (MDM4), transcript variant X2, mRNA. 0.0 3874 99.86 0.391430646332607 NM_002393.4 MDM4 Homo sapiens Mdm4 p53 binding protein homolog (mouse) (MDM4), 0.0 2181 89.70 0.29520697167756 TCONS_00066584_2 sp|Q2HJ21|MDM4_BOVIN MDM4_BOVIN Protein Mdm4; 0.0 1019 99.59 0.9979633401222 4 coding 0 0 1 0 -0.0548634764379948 0.663549181554553 -0.0695626325305336 0.359238585608994 GGGCCGGCTCAGCCTTCTTGCTCTCTAGCCCTCCCACTGGCCCATCTATGATTTCCGGAGGCCTCACCGGAAGCTCCTGTGGGCGATGGGTTGGGGAGGCCGGAAGTTGCGCCTTCAGTACTCGCCGTTTCAAAATGCTGCTAAGACCTTAGGGACAGTTGAGTGACGCCCCCACAACCCTGGGCTCGGCGGAAAGCGACTCATGGAACGGCCGTGAGCAGACTTCACGTCACTTCACTGCCAAAATGACATCGTTTTCCACCTCTGCCCCATGTTCAGCATCTGACAGTGCTCGCAGGATCTCTCCAGAACAAACCAATCAGGTACGACCAAAACTGCCTCTTTTGAAGATTTTGCAAGCAGCAGGTGCACAAGGTGAAATGTTCACTGTTAAAGAGGTCATGCATTATCTAGGCCAGTATATCATGGTGAAGCAGCTTTATGATCAGCAGGAGCAGCATATGGTATATTGTGGTGGAGATCTTTTGGGAGAACTACTAGGTCGTCAGAGCTTCTCTGTGAAAGATCCAAGCCCTCTCTATGATATGCTAAGAAAGAATCTTGTCGCATTAGCTACTGCTGCTACAGATGCTGCTCAGACTCTCGCTATCGCACAGGAGCACAGTATGGATATTCCAAGTCAAGACCACCTGAAGCAAAGTGTAGAGGAAAGTTCCAATTCCAGGAAAAGAACTGAAGAAGGCAATATTCCCACACTGCCTACCTCACAGTATAAATGCAAAAATTCTAGAGAAGATGAAGACTTGGTAGCAAATTTAACTCAAGAAGAGACGTCAAGACTGGACCTCGGGTTTGAGGAGTGGGATGTAGCTGGCTTGCCTTGGTGGTTTTTAGGAAACTTGAGAAATAACTATACACCTAGAAGTAATGGCTCAACTGATTTACAGACAAATCAGGATATAGGTACTGCCATTGTTTCAGACACCACAGATGACTTGTGGTTTTTGAATGAGTCAGTGTCAGAGCAATTTGGTGTTGGAAAAAAAGTTGAAGCTGCTGATCCTGAACAAACAAGTGAAGAAGTAGGGAAATTGATAGACAAAAAGGTGACTGAAGTGGGAAAAAATGATGACCTTGAGGACCCTAAATCCATAAGTGACGATACTGATATAGAAGTTACCTCTGAGGATGAGTGGCAGTGTACTGAGTGCAAGAAATTTAACTCTCCAAGCAAGAGGTACTGTTTTCGTTGCTGGGCCTTGAGGAAGGATTGGTATTCAGATTGTTCTAAGTTAACCCATTCTCTCTCCACGTCTGATATCACTGCCATACCTGAAAAGCAAGAAAGCGAAGGAGTTGATGTCCCTGACTGCAGAAGAACTGTATCAGCTCCAGTTGTTAGACCTAAAGATACATACGTAAAGGAAGAAAGCTCGAAACATTTTGATCCTTGCAACTCGGTGGAATTCTTGGATTTGGCTCATAGTTCCGAAAGCCAGGAGACCATATCAAGCATGGGAGAACAATCAGATAACCTTTTTGAACAGAGAAAAGATACAGAAAACATGGAGGATTGCCAGAATCTTTTGAAGCCATGTAGTCTGTGTGAGAAAAGACCACGAAACGGGAACATTATTCACGGGAGGACAGGCCATCTTGTCACTTGTTTTCATTGTGCCAGAAGACTAAAGAAGGCTGGGGCTTCTTGTCCTATTTGCAAGAAAGAGATTCAGTTGGTTATTAAGGTTTTTGTAGCATAGCTGAATCAGTGAATTACAGACAGATAGTAACAGAGCTGGTCATGTGTCCAAATATCAGTATTGAGCATCTCTACGCAGGGGTGACCCATTTCATACTTTGATTTATTCATGTGAACTTTTATGTTCTAGGTCATTTTTACCTCTAAACTTATAGAATTTGAGAATAAGTTCTTTAGAACTAGATTATCAATTTGGAGACTATTAACATTAAAAGAGAAGTTACCCATTCTGTCTTCAAAGATGAGGATCTGGGAGGGAGCAGTACACACAGAAATACATTCATTTTTATTTAATTTAATTTCTTACTGTTCTTTTCTGGTGGGGAATGTTCTTGGGCATCAAAATCCAAGGTGGCTATTAGAAAGATACTAAAGCTGTCAATGAAAAAGCATAAGTCAGTAATGTATAAAGTAGACTACTTTATGTTGTGTGGTTCAGAGAAATGATTATTTTTGTAATAATGTGCCTAGAACAGTGATATCCAACATTTTTGCTAACATACCTCAAAAAACAATTTTGAAAAAGTACATATGACTTTTTGCACCTTTTAAAAATTGAGGCGTAGTTAGCAAGCAATAAAGTGTTCCCTTCTGCTGAATTGTAGACATCTCAGTAGCCACCTGAAGCAAGCAATAGCACGTTTCTGTCTCCTCAGAATGTTCTCTTGTATCCTTTTCTAGGTAGTTCCTCCATCATTTCATGACTCTCACCCTCGATTAGTTTTCCTTTTGCACATGTTGAATTTGACTTCTAAATTTTTTAAATAAATTTCAGTACTTAAAGAGGATGCATCATCCAGTATATTGTAGATGTGCTTTAGATATATTTTTGCCAAAACCTTGGAGCTGTAGATTTGGCTGGTTGAATTTATGGAGAAAGTCCTGTCATATATACTGGCAAAGCCTATTCTCATTATAAAACTAATCAGCCAAGTCAGACTTCATTTTCAGTTGAAATGTTTGACTTTATATTAATTTATTTTTGGCCGCACAGTACAGCATATGGGATCCCCGGCCAGCATTCAGACCCGTGCCCCTGCTCAGGAGCGTGGAGCCTTGCCGTTGAACCGCCAGGGAGGCCCTGTTTGGCCTCATTTGTAATCCAGTTGCATGTGTTGCCTGCGTCTATGGCATAGCCTTCTCAATTGCAGTTCTAAGACAAGGCGCAGAGATTGGGACCAAAGCCCTCTGTGCTGTACTCTGCCCTCTTTGTTTCCTGGGAGCCTGCTAGGGGTTTTTGTCTTTTTATTTGATGCCTCTAGTGGTTTTTTTAATGTCCTAAGGCAGTGCCCCATAAGATTCTAGGTGGGTGAGAAGCAGCCTTTCTTCTGAGAATAGGGATTATGGCCATTGTGAAAAGGAAAGTATTTAAAGATAGCTCTGAAGAGGTTTTATCTGAGCACATAAATATTAGGATAATACATATGGAAATTGAAGATCTTAAAGTTGCTTTCCTTATAGATATTCCTGTCTACTTTCCCTATTGGAAGAAATTTTGGTGTATGCTCAGGGGTATGAATATTTTGAAGATCAAGGCCCTAAAATTATTAAATTTAAGGATCTTAAGAATGAACTTGGGTTGCTTGCTATAAGCCCAACTCAACTCCCTGCCCCAAACACACACATGCATGCATTCACAGGCGCTGGTACACACACAGGTACAGACAAAAATCCTTTATTTAGCATCGTATTTAGAGAAATTTTGTTAAAATCATAGAAATTAACCAGCACGCACTCATATAGTCAACCTCTTATTTTGCACATGAGGCTGAAAGGGTAAATGACTGCTAAAAGTCACAGCTAGTGATAGAGCTTTCTGGGATCCAGGTCTCCTACAGTAAATCTCTAAACCATGCTTTCTTCCTTCTCATTATTTGTTAACTGTTTAAACTGTGGTTTTTGTTGAATTTGGAATAACTGATGGCCTTAAAATACTGAAGAATATGAGCTGCAGCCAAAACAGGACTTCAGAGAGAATACTTAACTGTTTCTCCTCAAAGAGAAAAGGCAGTACATGTCAGCTCCTCGTACATAATCCGATAAGTTACTCCTCCCACTGGAAAGACAAGTAGAGGCAGCAGAGGAACCTGAACTGTCTGTCCAGTGTTTGTCCTCCTTGGGGGATGAAACTTAGGTCTCTGGCTGTCTCCAGGCATTAGGGACAAGGGTTTTTCCCCTCAGTAAATAGAATCAGTCCTTCAAGTTCAGTGTTTCATTAGACTATGGTAAGTGCTCTAAAAATTTAGGAAGTTAAGTAACTTTATACCCCATTCTCTCCCCACCCCACCCCCATACTACTCTTTTCATGATAGTTTGATAGCTATTGATTTTATTTTAATTTTGCCAGTTAATTGCTTTTGCAAGTAAAATGAGGAATAGGGAGAGCTGGGATCTGCACTTGTACCCTCTGGTCCCTCTTATATGAAGTTGAGTTTTTGAAGAAAGCTTAATAAAAGTCTAAAATTTTTATTTTTGTATATAGATATTTGCTGCTAATTTGGTGCATCCTTGCCTAGCACAGAATCCTCTTATGCTACTCTACTTACTTTTTTCCCCCCTTGGATCACCTTGGTTTTTACTGTCCCCATTAGCAGTAAATACTTTGCTTAGAAGATTTTAAACTGCACATTTGAGCTGAAAATATTTGAATAAATACATTTAGGTTTACTGAACCCCTATCAAGAGTCTTGAACAACTTGAATGTTACAAAGAACTGTATCTGCAGAAGGAGGTAATATTTCTTTTGTAGCTTACCTGAAACCCAAGATGCTGCTTCTGCAGTTTGTTTTCCATTATCCAGGATCTTTGTTTTATTAATTTTTTTAATTTTTTATTTTATATCGGAGTGTAGCCAATTAACAATGTTATGATAGTTTTAAGTGCACAGCAAAGTGACTCAACCATACATATACATGTATCCATAAGAATTGGCCTGTGATGTGGGAGACCTTGCTTGCTTGGAAAATCCCATGAACAGAGGAGCCTGGCGGGCTATAGTCCCTGGGGTCTCAAAAGAGTCAGACACAACTGAGCAACTGACACTTCACTTCATTCTATCCTAAACTTCCCTTGAATCCAGGCTGCTGTATAACCTTGAACAGAGCTCCTTGTGCTATACAGTGGATCCTTTTTGTTACCCATTTTAAATATAGCAGTGTACATGTCGATCTGAGAGTCTCTATCCCTTCCCCCCACTTTTCCCCACTGGTAACTGTAAGTTCTCTAAGTCTGTGAATTTGCTTCTGATTTGTAATTAAGTTTATTTGTATAATTTCCTTTTTGATTCTGCATGTAAGGGATATCATGATATTTCCGTCATATCGTGTCATATGATACCATCTGATCTCTCTGGGTCCATCCATGTTGCTGCATATGGCATTATTTCATTCTTTTTAATGGCTGAATAGTATTCCATTGTGTATATGTACCACATCTTCCTTATCCATTCCTCTGTTGATGGGCACTTGGGTTGCTTCCAGTTTTTGGCTGTTGTAAACAACACTGCAATGAACACTGGGGTGCGTGTCCCTTCCGACCTGTTTTTCTCCACATATATTCCCAGGAGTGGGATTGCAGGGTCCTATGGTAGCTCTATTTTTAGTTTTTTTAAGGAAACTCCATACTGCTCTTTGTAGTGGCTGTACCATTTTACATTCTCACCAACAGCATAGGAGGGTTCCCTTCTCTCCACACCCTGTCCAGTATTTACTGTTTATGGATTTTTTGATAATGGCCATTTTGGCTGATGTGAGTTGATAACCTCATTGTAGTTTTGATTTGCATTTCTC EMBV3_21855 TGGTTTGCGCCAAATGTCGTTTTCTCCCCTAAGTACATTTTCCCAACAGCAAGAGTTGGG Gene GeneID:788063|QSOX2:XM_002691616:263_cdna UTR3_Alt 2 NULL GeneID:788063 11 GENE QSOX2 NULL quiescin Q6 sulfhydryl oxidase 2 EMBV3_22393 ACCTGCCCTGTTACATGACCATAGAAGAGATGAAGTCGTTAATCAGGCTCCCGGACCTCA Gene GeneID:518665|ARL16:XM_002696140:290_cdna Constitutive 0 NULL GeneID:518665 19 GENE ARL16 NULL ADP-ribosylation factor-like 16 EMBV3_12445 CAGTAAGGCGGAAGATGTTGAAGGCTCGCATTTACTGGTGTGGACTCCCATCCCTGGAGT Gene GeneID:497206|PRP-VII:NM_001012286:44_cdna Constitutive 0 NULL GeneID:497206 23 GENE PRP-VII NULL prolactin-related protein VII EMBV3_06545 GCTCTGAGCAGTGATACCTGTTGTATGGTGAAAACGCAATATGAAATCCCCTAGGTGCTA Gene BVV0102_217392 + 0 NULL GK000025.2:20801038-20952033 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13105 AGCCGCATTATTGCAAGTGAAAAAGTCCCCTCATAGGAGATCAGTGGCTCTGCTGTCATG Gene BVV0101_038242 + 0 NULL GK000012.2:83115416-83256884 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23549 CAACATACTTCAATGACAACATCCTTACCCTGATACGGACCCTGGTGACTGGAGGAGCCA Gene GeneID:282573|KCNMA1:NM_174680:245_cdna UTR3_Alt 3 NULL GeneID:282573 28 GENE KCNMA1 NULL potassium large conductance calcium-activated channel, subfamily M, alpha member 1 EMBV3_08002 GAGGCAACTAAGTGGATTCTCCCCTAGACCCACCATGACAAACAACAGCCCACATTTTGA Gene BVT0102_218001 - 0 NULL GK000005.2:84308916-84854034 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192740 TCONS_00192743 TCONS_00192742 TCONS_00192741 1 XLOC_117261 NonCoding TCONS_00192741 XLOC_117261 NonCoding NonCoding LOC100848974 5:84421062-84423545 = TSS144173 1539 1 TCONS_00192741_1 43 0.179987004548408 3 0.381144238517325 0.000115747966031132 3.06914746567309e-05 0.000114246987944727 7.07030904050503e-05 0 2.32427054597099e-06 3.66118819343344e-180 4.26067267339379e-192 2.21973078457735e-183 0 8.92469493165329e-06 1.06304539993117e-05 0 1.80727949852612e-193 9.50082993629643e-06 3.42436899132568e-320 3.77979105725183e-144 2.89079152705602e-197 1.98754454125122e-05 2.74241394333656e-05 0.000228488935645217 7.23262141901019e-05 0.000305952728596023 0.000289457074402254 5.78961071349581e-05 1.22146884558758e-05 8.50256191762569e-05 0.000661564819795932 2.4474343909376e-05 0 XR_138718.2 LOC100849884 PREDICTED: Bos taurus uncharacterized LOC100849884 (LOC100849884), 0.0 2122 100.00 0.763482781026641 NR_038227.1 RASSF8-AS1 Homo sapiens RASSF8 atnisense RNA 1 (RASSF8-AS1), transcript 8e-36 156 88.43 0.0779727095516569 0 noncoding GGTGGGCCCGAGAGCCAGACACGGTGCCTCGCTGACTCTCACGGAGCAAAATCTTCCATCGCCCGGGGGTGAGACTTGTAAAACTGCCCTCCTCGGTCACCCCGGAAAGTAGGAGGCTTTTTCTGCAGACTCTGTTAGAAAAAAAGAAAGAAAAAAAAAAGGGCCCTTCCATCCCCCCAGGACTGAGGGTCTGAATTGCTTTTCATCTGGAGTGGCATGATTCAGCGACCCCCTTCTCAGCAGCAGGCAATGACAGAGACAGGAGACGAAAAACACAGCGAATGAATCAGACAACCTGCCTCCCTTGTATTGCTGGAATAGTCGTCCTTCTTTTATGGAGGTCCTGAAACAGGGGAGGGTGCTGACCTCGATTTTATCATTTGTCCAGAGGTGAATAAGTTGACTGACTCACGACAACCACCTTTCATACGACCAGCATGTAAATCAAGATGAAATTTATTATGATTGAGTAACTGTGTCCACTGTTTAAGAGAAGCACTTACTAGGATCCAGGAACCTGTTGAGGTGTCCTCATGCCCATTGTTGCCCTCTTGGTGGCTACAGATGCCAGTGAACTTACCACTGTCCAGCCTGGATAAACCGAGACAAGTCCCTTCCCTACCTTAGCCCCATGTGGTTAATTCATTCTTTGTTCAGTGTATAGTATAATTTGTTTTGAGCTTTCTTAGCTGTAAATCACATCCCTGTTAAGCCTTCCTGAGATCACACCAAATGTCCTTGGCAGGATTTGTAAACAACCCTTATTTCTGGTCTCTAATTATATTCCCTGAAAGTAACCTAACTCGAATAAGTGAGTATTCATGCACTTAAAGCCCTGTGACACAGTCAGATTTTATATGCAAGAGAAGAATCTAAGAGGGTGGATTCAGAAAAGAGGAGAATCCCAAGGGAGAGAGACATATGTCTCCTCTTTCCTGAATCAGTGCGAATGAACTAGTCAACAGCACCTAGAGTTACGTTGTATGTATTATTAGTTTCCTGCTGCTATCTGTAAACAAGTTAACCGCAAACTTAGAGGCTATAAGAATGTGTTATTACAGTGCCAGAGATCAGAAATCGCAAAATCAAAATGTGGGCTGTTGTTTGTCATGGAGGGTCTAGGGGAGAATCCACTTAGTTGCCTCTTCTAGTTTCTCCATCTCTTGGCTTATGGTCTCTTTCTCCATCTTCAAGGCCCCAGAATGGAATCATCAAATCTCTCTTTTATGACTTCTACTTCATGGTTAGGAAGACAGCTCTTTCTCTGGGCTAGGCAAAGAAAGTAGGAATTGATGTAGATACATTTCTAGCCATATATGTCATGAACTGAATTGAGTTATTTGCAGAAAGAAAAGATACTGTCTTCATTACTAGTAAAATTGTCATCTGAATAACTTTTTTGACTGTGTGGTTGCTAAAATGATGCCTCATTAATCCAATAAAACCTCTTTCCTTTTGGTGACCCATATAACTGAAACCCAAGGTGTTAACACGCTAAGTTCACATGTGCAATTCATGGAAATAAATTCCTTTCTCTGG EMBV3_35731 GAGACAGCAGGTCTTCTTCGACTGCACAGGAGGAATATTCACTCACCGTGAGAAAGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14119 ATGAGCCATTTGAACATGCTTCCTTCACACTCTGTTTCTTGTGCTGCCGAACCACCGGCA Gene BVV0101_031975 + 1 EMBV3_01190 GK000015.2:79360604-79377347 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16763 CAAGCATATGCCACAGAAAGTGGGTCTGTAACTCTGAGTGCTTGCGCATCCAGAAAAGAC Gene BVT0101_000935 - 0 NULL GK000009.2:38846738-38856661 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237072 TCONS_00237073 TCONS_00237081 TCONS_00237074 TCONS_00237076 TCONS_00237075 TCONS_00237079 TCONS_00237078 TCONS_00237069 TCONS_00237077 TCONS_00237071 TCONS_00237080 TCONS_00237070 1 XLOC_144645 Coding TCONS_00237074 XLOC_144645 Coding Coding LOC100849041 9:38846837-38864911 j TSS177327 1472 1 TCONS_00237074_3 130 5 0.91882919271842 0.000912084860789605 0.000779746748581352 0.000874942614143322 0.00063356901415003 0.000350019031759324 0.000317579794343097 0.00051423710447991 0.00112178373378863 0.0019702904864128 0.000242573182191267 3.14868746080598e-05 1.09390865761341e-08 3.38737709242895e-05 0.000354250108121675 0.000294665584920611 0 0 7.0297222875063e-08 0.000878098931451766 0.000595385024360268 0.00063932852843555 0 0 0 0.00199795416943207 0.00112213930820456 0.00159357861339378 1.41013722608e-09 1.00635125974375e-16 9.86443269089866e-13 XM_003582602.2 WISP3 PREDICTED: Bos taurus WNT1 inducible signaling pathway protein 3 (WISP3), mRNA. 0.0 1561 100.00 0.58695652173913 XM_005267196.1 WISP3 PREDICTED: Homo sapiens WNT1 inducible signaling pathway protein 3 (WISP3), transcript variant X3, mRNA. 0.0 1052 88.73 0.552309782608696 TCONS_00237074_3 sp|O95389|WISP3_HUMAN WISP3_HUMAN WNT1-inducible-signaling pathway protein 3; 3e-80 244 90.00 0.992307692307692 1 noncoding 0 0 0 0 -0.029995914271189 0.85873130877282 0.053106845091693 0.348967662001848 CCTGTTACAATGTGGTGGGAGAATTGGGCAGGGCCAGGCTGTGATGGGGTGGTCAGAGGTCAGACTTGCCCCTGTGTTTTGAGGGCCCCGGGAGAACAAGCAAGCAGCAAAGAGAGGGCCTGGGGCGGCAAACACAGAGGAGAGGCTGAGGGTTAAGGCGGGTAGCTGCGTCTAACATCACCATTTTGCTCAAGGCCGGCTCTGATCTCCTGGAGCGGGAAGAACAACAGTTCCTTCAAACAGATGTCACCCTTGGCCTGCCCCCTCTCAGTCCCGGGAGAAGCGCGCTCCAGGCCACCGCGAAGATCTCATCGCTGTGGGATGTGAGTTCAACGGGGTGCATTATCAGAATGGCCAGGTGTTTCAGCCCAGTCCCCTGTTCAGCTGCCTGTGTGTCAGCGGGGCCATCGGATGCACACCTCTGTTCATACCAAAGCTGGCCAAGAGGCACTGCTCTGGGGCTAAAGGTGGAGAGAAGACTGATCAGTCAAAATGTGGCCTGGGGTCGTCACAGAAACAGCTCTCAACAAGCTACAAAACAATGCCAGATGCGCCAGGCTTTTACCCTGCTTCCTGCGCTGATGCCTTTAAACTGCTGCCTGCCTTCCAGCATATAGGAATCTCCCACTGATTTGGAAAAGAAAATGTCTTGTGCAAGCAACAAAGTGGACCCCTTGCTCCAGAACATGTGGGATGGGAATATCTAACAGGGTGACCAATGAAAACAGCAACTGTGAAATGGGAAAAGAGAAAAGACTGTGTTACATTCGGCCTTGTGACAGTGATATATCAAAGACAGTAAAGATTCCCAAAGGAAAAACGTGCCAACCTACTTTCCAACCTGTCAAAGCTGAAAAATTTGTCTTTTCTGGATGCGCAAGCACTCAGAGTTACAGACCCACTTTCTGTGGCATATGCTTGGATAAGAGATGCTGTGTGCCTAATAAGTCTAAAATGATTACTGTTCAATTTGATTGCCCAAATGAAGGGTCATTTAAATGGAAGATGCTGTGGATTACATCTTGTGTGTGTCAGAGAAACTGCAGAGATCCAGAGGATATATTTTCTGAGCTCAAGATTCTATAAAATGAAGCACAAGGAGGAAAAGTTAAGGTTAATCATGTTATTACATCAAAATTTAAAATGGTATTAAGAGGGTAGCAAATTTGCCTTATTAGTTTAAAACAGTAAGAATGCCTGGATTTTCTCAGATAACTATATTTAAAGCATTAGAAGCTTAAAAAAAGGTTCTCCTAAAAATATATGTAAAATATGAAAACCTTAAAATTGAGCTCTTAAAATGTATAGTTATGTAATAGTTGGTTCTGTCTGCATATTCCATGAAATGAAAAATTATACAATTTACAAGAGAACATTTTATCCTATAAGATTTTCTAGATTAAATGTTAAACAGGAGTAAGATTAAGCTGTAAATATATTTATTATTTCCATTGCCCTATCCTGAATATCAN EMBV3_32798 CCCGGCTCTTATCGCTTGCCTGTGCATCTCCACTGGTCTTCACTCAGTATCATTCCAGTT Gene GeneID:510408|PLCL2:XM_002685174:23_cdna UTR3_Alt 2 NULL GeneID:510408 1 GENE PLCL2 NULL phospholipase C-like 2 EMBV3_11747 GGGAAAAGAAACCTTCGTTAATAGTTACTTAGTCTCCCTCACCCCATACCTACCCCCTAG Gene GeneID:538742|MIER1:NM_001076913:49_cdna UTR3_Alt 3 NULL GeneID:538742 3 GENE MIER1 NULL mesoderm induction early response 1 homolog (Xenopus laevis) EMBV3_31457 GAGACTCTACCTTTTCGGAGGAGAAGACATCATGCAGAACCCTGTGCGCCTTATCCAGGT Gene GeneID:516476|KLHL38:XM_002692637:111_cdna Constitutive 0 NULL GeneID:516476 14 GENE KLHL38 NULL kelch-like 38 (Drosophila) EMBV3_05718 GCAAAACAGGCGCTTTTGCAAAAGAAGGAGGATTAATGGGGTGAGTTCACTGGTGCAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31129 ACAACTTTGGGCGTTATTACCAAAGGAACCGTCATTGAGGTGAACGTGAGCGAGTTGGGC Gene GeneID:100300380|LOC100300380:XM_002696624:150_cdna Constitutive 0 NULL GeneID:100300380 21 GENE LOC100300380 NULL similar to TGF beta-inducible nuclear protein 1 EMBV3_38299 ATGCTCTCGCTCTTTGTCTGTGGCACTGCTGGCATCTTCCTCATGGCCCACTACAACCGA Gene GeneID:281689|CHRNG:NM_174273:34_cdna Constitutive 0 NULL GeneID:281689 2 GENE CHRNG NULL cholinergic receptor, nicotinic, gamma EMBV3_23077 CCAAATCATCAGCAGACAGGATCACCACCTCACTCAGCCTTGCCCATCAGAGGAAAAACA Gene BVT0101_050974 - 1 EMBV3_33847 GK000015.2:29233497-29257442 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159453 TCONS_00206742 TCONS_00240951 TCONS_00231120 TCONS_00037299 TCONS_00072364 TCONS_00214408 TCONS_00166385 TCONS_00058878 TCONS_00161700 TCONS_00229190 TCONS_00123553 TCONS_00159443 TCONS_00239057 TCONS_00011258 TCONS_00027491 TCONS_00194598 TCONS_00183431 TCONS_00187664 TCONS_00159451 TCONS_00135611 TCONS_00055226 TCONS_00063227 TCONS_00200658 TCONS_00031794 TCONS_00194599 TCONS_00122098 TCONS_00240898 TCONS_00063950 TCONS_00237211 TCONS_00137503 TCONS_00161069 TCONS_00194597 TCONS_00159445 TCONS_00072230 TCONS_00237210 TCONS_00233091 TCONS_00162553 TCONS_00021091 TCONS_00147522 TCONS_00110254 TCONS_00190035 TCONS_00207519 37 XLOC_097421 XLOC_125263 XLOC_147615 XLOC_140609 XLOC_021352 XLOC_044133 XLOC_130677 XLOC_101223 XLOC_036213 XLOC_098587 XLOC_138685 XLOC_075105 XLOC_145723 XLOC_006809 XLOC_015267 XLOC_117801 XLOC_111152 XLOC_113709 XLOC_081834 XLOC_033034 XLOC_037954 XLOC_122310 XLOC_018039 XLOC_073654 XLOC_147562 XLOC_038676 XLOC_144662 XLOC_083713 XLOC_097961 XLOC_043999 XLOC_142573 XLOC_099434 XLOC_011764 XLOC_089409 XLOC_066158 XLOC_116070 XLOC_126034 Coding TCONS_00037299 XLOC_021352 Coding Coding - 12:76724494-76742065 - TSS26948 5826 4 TCONS_00037299_8 113 0.617919670442842 5 0.668696642003415 0.00108607240391426 0.000584485779713726 1.86850561954068e-07 0.000519542362725803 0.0002411271233417 0.000174010683895097 0.000558189080895581 0.000479976911683683 0.00051400066000886 4.91305130994023e-05 3.62407368134271e-05 1.8669102568165e-08 1.4149919261787e-05 0.000155254192711607 0.000779379848666674 4.34291143949694e-09 0 9.10659895062794e-12 0.000712300154702628 4.242386186706e-09 4.98729222661059e-14 0 0 0 0.000894661175010931 0.000862501053245715 1.71028895819655e-08 1.21022019523332e-05 4.45081679445472e-10 1.53948527502752e-24 XM_003585566.2 LOC100336232 PREDICTED: Bos taurus multidrug resistance-associated protein 4-like (LOC100336232), partial mRNA. 3e-105 389 90.18 0.0487469962238242 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 1e-122 446 66.79 0.277548918640577 TCONS_00037299_4 sp|O15439|MRP4_HUMAN MRP4_HUMAN Multidrug resistance-associated protein 4; 5e-50 172 80.85 0.939393939393939 0 noncoding 1 0 1 1 -0.388417805223429 0.0410679342779144 0.0367615125835988 0.563767249355537 ACAAATTTTGATCTTTCTTCATTTAGGGTGGAAGGGAAGAAAACTGCTGAGCTGGTAAGATGGCCACACAAATAGCTACACACTTATGGGTGGGAGCCCAACGTTTTGTTCATTCAGTCCTGCAGTCATTCATTCATTCAAACAGCACATTCTAGGCAGTTTTGCTGCACACTGTCCATGCACCAGTGAGATAGTCATGCTGGACTTGGGCTTGAGTCCAAATCAGGATTCATCACTTACTGATTCAAAGACCCTGGACAGATGCTGTCCTTGAGCCTCATCTTTCTCATCCATAAAACAGGGATAATACCTTGCTGAATAGGGTGTTGTTAGAGTTAAAGGTGAGGGAAGTTCCCCAGAAATATGCATGACCGGTGTTCTGTAACATATGCCACTGTTACTTGTCTAGGCCCTGAGCTCATGATGAAAGACATCATGAGACAGCCTCTCTCTCCTCAGATTTCCTTTTCCCAGTCTACGAGGGCAGCAACAAGCTCACAGAGGTTCCCTGCACAATGCAGCATGTAAGATGCCAGAAAGCTGCCCCCATTAACACCAGGCATTCATCTTCCAAAATCATCTGAGTTCTTCTTTCTGTTACTTTTCATTAGGTCTTGCAGCTCTACAAACATAATCTGTGCTAAACTCTGTTGTTGTCCGAGGTCAAAAAATCTATTGGAGTTTGGAGCAAAGAAAGGTTTATTGCAAGAGTCAAGCCAGGAGTTCATGCTCAAAAAAATGCAAACTCCCTGATGGATTTCACGGGAGAGTTTTTACAGGGAAGGTGAGGGAGAAAGTGCAGTGTAGGTTTCCCTCATTATTCTCTGATTGGTTGATGATGAGGTAACAGGGTCATGTCACGGGGTTTAACATCTTCAGTCCTCAGGCTCCAGATGGTGTGGGGGCTCCCTGCTCATGGTCATCATGCAGTTAACTTCTTCCATCTGAGAGGACCGCGCTGTGTCTGAGCCTCCAGCCTCCCCGCCGGCGCCTCCAGGAGCAGCTCCATCACCAGAGCAGCGCGACCCCGGCCCGCGGCCGCCTCCACCGGCAAGATGCGGAAGCCCAACCCGCTGCAGGACGCGAACTTCTGCTCGCGCCTGTTCTTCTGTTGGCTAAACCCCTTGTTTAAAATTGGTTACAAACGAAGATTAGAAGAAGATGACATGTACTCTGTACTTCCGGAAGATCACTCCCAGCACCTTGGAGAAGAACTACAAGGGTACTGGGATCAAGAAGTTTTGAGAGCTGAGAAAGATGCGCGGGAGCCTTCTTTAATGAAAGCAATCTTTAAGCGTCACTGGAAATCCTATTTAGTTTTTGGAATTTTTATACTTCTTGAGGTTAAAACATAGTGTTGTGGAAGGAGAAGACATTTTATACCACATTATGATATTATTGATGGTCAGTAAATAACATAAATGCTGAAAGTGATCCTTGACCAAAAGAATATACTACAAGCTCAAGAAATGTGGTTTGGAGGACGTAAACTTGGACCAGAGCCCAGATAACATAAGACGTTTTACAGGTGCTCAGCAAGTAATTGTTAAGTTGCCCAGTTCACATCTGATAAATGCTTTCCTAAGAAGGGATCGTCATCTCTCCCCTCCTGTGATACCGAACCCATGGCCCTGCATTTGGGCTGGAGCTCCCAGAGCTCCCAAGAGTACACCCTTCCCTGGGCTGCCTGCCTCCTTCCCTGTAGGCTGGGTCACCCAGGCCAGAGCTCCCTGTGATGAGGAGCTCCAGCTTCATCATTGAATTGCAGAGACTCCATGCACCATCCATGCTGGTTTCTGTCCCTGGATGTGGGGTGGTTTCCTGCATGAAAGGGGATCCTGGTAGCCTGGCATTAGCAGAAGGTGTAGGAGAGGATGTGGAGTAGACAACCAGAGACAGAAAGCAGTGAGGTCAGTGACCTTCATGACCCTGAAGATCCTGGGTCAAGATCCCTCAGAGAGACAGTTCCAACCTGGGGACACAGTGCCATCAGCCCATCTATTCTGGCTGAGCCTACTCAAGGTCTACTGCAGACCCACTTGGGTGGCTTGTGCTCTCAGTGGTCCCTTAGTTCTGCCATAGGGACATGGGTGGCCTGTGAGTGTGTGAAAGCAGAAGGGATGGAAGATGCAGGTGCTGTGAAAGGGGTGGAGAAGGTGGTGAGTTGTCATAAGTCCATTGTGTTGAGGATAAAGTGGGTGGGCCAGGTGGTTTAGAGTTGGGGGGTGTGGCTCTTGTTTAAAGGTTGTGTTGTACCAGAGGACACTGTGGGTAGCAGGCAGCAGAGTAGGTGAAGTCTGCCCCACACAATTGGAGAGACCAGAGAATCTGTCAGCTCACAGGTGACTTAATGGTCCTGGGAGATGGAGTCTTTGATGACAAAGGTGGGTTGACCATTGTGTCAGAGAGTGGGGACAGGTATGTGGGGTGGAGTGCCACCTTTGAGAGGGCATTGATGACTGAGATACTGCAGTGCCTTGTGAGGGCAGGGTGGAGTGTTGATTTCAAAGTTGTCCAGCCCAAGTAATACTGCCTGCTGGGGATCTAGGAGGGTGAAACCTCTTTCAGGAGGTTGGTTGTTGGTCAATCATGGCAGAGAAGTGGGAAGTTGAGGACCTGGTAAATGTGGGGGCTCATTTTCTGTAGTATTAGAAGTACTAGTAGCAGATAACAAGAAGGTGGAGGAGTAGGTGGACCTGGAGTACATCTCTCTCCATGATACATCAGGAATACACTTTCAGGAATACATCAGGAAGACACAGAAGTGCATGCAGAACACCAGCTGAGAGTGGACAGGAGTACCTGGCCAGTGGAAAAGAATATATAGAGCCACACAAAACTTGAGATCAAGCCCCGAGGCTTTGGAGTGGGTGCACTGACTCCACGACCCTAGTCTACCAGAAAACTAACCCTAGGGAGTATCAAATAGTGAGAACTCACAACAAAGGAAATCACTTGAATACAAGGCCCAGCATCACCCAACCACCAGTAGCACTGTGTGGAGGATGCCTCATTTAAACAACAAACAAAACAAACATACAAACCCAATCATCAGCAGACAGGATTACCACCTCACTCATCCTTGCCCATAAGAGGAAAAACAAACAAAAAAACTCAGCACAGATCTCCCCTATATGAAGCTCACACAAACCACTGGACCAACCTTAGGAGGGCAGAAAACAAAAAGAAGAAAGAATTCAACCTTGAAGCCTGGGAAAAGGAAACCTCAAACACAATAAGTTAAAAAAAAAAATGAAAAGGCAGAGAAATGCTACACAAATGAAGGAACAAACTAGAAAAAACAGAAGTCCAAATAAATGAAGAGGAAATAGGCAAGCTACCTGAAAAAGATTTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAACTGCAAGAATAAATTAACAAAGACCCAGAAGAATTGAAGAATAAACATTCAGAGACAAACAACACAAATACTGAAATTAAAAAATACTCTAGAAGGAATCAATATCTGAAGCAGAAGAATGAATCTGTGAGCTGGAAGATAAAATGGTGGAAATAACTTCTGAAGAGCAGAATAAAGTAAAAAGAATGAAAAGAACTGAGGATAGCCTCAGAGACCTCTGGTACAATATCAAACCCACCAACATTCGAATTATAGGGGTCCCAGAAGAAGAAGAGAAAAATAAAGGGTATGAGAATATTTTTGAAGAGATTATAGTTGAAAATTTCCCAAACATGGAAAAGGAAACAGTCAAGTCCAAGAGGCACAAAGAGTCCCATACAGGATAAATCCAAGGAGAAACATGCCAAGGCACATGTTAATCAAACTAACAAAGACTAAACACAAATAAAGACTATTAAAAGCAACAAGGGAGAAGCAGCAAGTAACGTACAAGGGAAACCCCATACACTTAACAGCTGATCTTTCAGCAGAAACCCTGCAGACCAGAAGGGAATGGCAGGATATATTTAAAGTACTGAAAGGGAAAAATCTACAGGCAAGATTACTGTATCTATCAAGAATCTCATTCAAAACTGATGGAGAAGTCAAATGCTTTTCAGAGAAGCAAAAGTTAAGAGAATTCAGTACCACAAAACCAGCTTTACAACAAATGTTAAAGGGACATATATAGTCAAGAAATACAAGAGAAGAAAGAAGATCTACAAACTCATTCCCAAACAGTTAAGAAAATGGCAATAAGACATACATATCAATAATTATTTTAAATGTAAATGAATTAAATGTTCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAAACCCACTTCAGCCCTAAAGACACATATAGACTGAAAGTGAGAGGATGGAAAAATATGTTCCATGCAAATGAGAAGCAAAATAAAGCTGGAGTAGCAATCCTCATATCAGACAAAATAGACCTTAAAAGGAAGATTACAAGAGATAAGGAAGGTTACTACATAATGATCAAGGGATCAATCCATGAGGAAGACATAACAATTGTGAATATCTGTGTAACCCAACATGGGAGTACCTCAATACATAAGACAAATGCTAACAGACATAACAGGAGAAATTGACAGTAACACAATCATAGTATGAGACTTTAACCCCCTACTCACATCAATGGACAGGTAATCAAAACAAAATTAAGGAAGTACAAGTCTTAAATGATAAATTAGATGAGATGGATGTCATGGATATCTTCAGGACATGCCATCTGAATGCAGAAGAATACACCTTCTTCTTAAGTGCACACAGAATATTCTCCAGGATAGACCACATCTTGTGTCACAAATCAAACAGTAAATTTAAGAAAATTGAAATCATATCAAGCATTTTCTCTGAACACAATGCTATGAGGCTAGATATCAATTACAAGAAAAAAAAAAAACTCTCTAAGAAACACAAGCACATGGAGATTAAACAATACGTTTCTAAATAACCAACAGGTTACTGAAGAAATCAAAAGGGAAATCAAAAATTTCTAGAAACAAATAACAATGAAAACAACAACCCAAAACCTATGGGATGCAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCAATATAATCCCACCTCGAGAAACATTGAATAGATAACCTAACTTTACACCTAACACAACTGGACAAAGAAGAACAAGAAAATGCCCAAATTAGTAGAAGGAAAGAAATCATAAAGATCCGAGCAGAAATACATGAAAAAGAAATGAAAGGAACAATAGTAAAGATTAATAAAACTAAAAGCTGGTTGTTTGAGAAGATAAACAAAATTGACAAGCCTTTAGCTAGACTCATCAAGAAAAAAAGAATCAAATCAACAAAATTAGAAATGAAAAAGAGGTAACAGCAGAGGATGCAGAGATACAAAGGATTATAAGAGACTATTATGAATAACTATATGGCAATAAGATGGATAACTTAGAAGAAATGGACAGATCCTTAGAAAAGTTCAATCTTCCAAGACTGAACCAGGAAGAAATAGAAATTATGAACAACCCACTTATAAGTACTGAAATTACTGAAATTGAAGCTGTGATCAAAAATCTCTCAGAAAACAAAAGCCCAGGACCAGATGACTCCATGGAAGAATTCTTTTAACATTTACAGAAGAGCTAATGCCTATCCTTCTAAAATGCTTTAAAAAAATTACAGAGGAAGGAACACTTCCAAACTCATTCTATGAGGCCACCATCGCCCTGATACCAAAACCAGACAAAAACAACACAGAAAAGAAAACTACAGGCCAATATCACTGATAAACATAGATGCAAAAATCCTCAACAAAATTCCAGCAAACAGAATTC TCONS_00035693 r 5' 29777 TCONS_00035693 r 5' 16689 EMBV3_10458 CTTGCCACCTCTTCTTTATATCTTATGCCTCTTCTGTTAGGTCCATACCATTTCTGTCTT Gene BVV0102_024737 - 1 EMBV3_01810 GK000030.2:44948850-45641082 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131278 1 XLOC_079983 Coding TCONS_00131278 XLOC_079983 Coding Coding - 22:47573955-47574715 - TSS98145 760 1 TCONS_00131278_1 119 0.996052631578947 1 0 0 0 0 0 0 5.22961592859875e-07 0 0 1.03817558468215e-05 0 0 0 0.000742803336955999 6.18946551909556e-06 5.86865937577861e-07 3.47520880674858e-05 2.42723520072591e-06 0 0 9.46241307943774e-06 0 0 1.50888878732269e-06 0 0 0 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 699 87.57 0.734210526315789 0 coding CTTCCTCAGTGATCAGTGCAAAGAAATAGAGGAAAACAACAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATAGACCTAACAGAAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACGGAAGGACTGTACAGAAAAGATCTTCATGACCCAGATAACCACAATAGTCTGATCACTCACCTAGAGCCAGACATCCTGGAATGTGAAGTCAAGTGGGCCTTAGGAAGCATTACTATAAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTTCAAATCCTAAAAGATGATGCTGTGGAAGTGCTGCACTCAGTTTGCCAGCAAGTTTAGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGCTCAGGTACTACACAACTGCACTCAAACACTAGCAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGTAGTACTTGAACTGTGAACTTCCAGATGTTCAAGTTGGATTTAGAAAAAGCAGAGGAACCAGATATCATTGCCAACATCCGCTGGATCATCAAAAATGCAGGAGAATACCAGAAAACATCTACTTCTGCTTTATTGACTATGCCAAAGCCTTTTACTGTGTGGATCACAATAAACTGTGGAAAATTCTTCAAGAGATGGGAATACCAGAC TCONS_00126967 . 5' 6761 TCONS_00126967 . 5' 6761 EMBV3_16185 AGGAGTATTTCACACGGCTCGTGTCTAAGGACAGCACCCAGGACTCAGCAAGCACACAGA Gene BVT0102_242618 + 1 EMBV3_14347 GK000019.2:30262798-30276154 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093223 TCONS_00093222 TCONS_00093225 TCONS_00093227 TCONS_00093224 TCONS_00093226 1 XLOC_057106 Coding TCONS_00093223 XLOC_057106 Coding Coding - 19:30269404-30274871 - TSS69992 4765 1 TCONS_00093223_7 303 0.397691500524659 3 0.128796194657885 0.000564290998455013 0.000279733583729889 0.000458834415413774 0.000946339053608797 0.000300938711726852 7.42509714079926e-05 0.000190730075762105 0.000187298045233879 1.8251420370498e-05 9.83030860683465e-05 6.85458528718984e-17 0 2.5048400271857e-24 1.15848548749625e-20 3.26784550718251e-05 0 0 0 0.000425628909446031 0.000550220985611576 0.000238314105569268 2.39882832456677e-14 3.74803966798671e-19 0 0.000180745281723503 0.000227893153091558 0.000977304262770132 2.77785988759005e-72 1.01880686348414e-06 0 XM_005212209.1 C10H14orf1 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf1 (C10H14orf1), transcript variant X1, mRNA. 0.0 1404 89.06 0.226023084994753 TCONS_00093223_7 sp|Q10126|YSM6_CAEEL YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6; 3e-12 66.6 26.67 0.676567656765677 1 noncoding ATTAACCTTACAAAGCCTCACAGGCTAACCAAACAGCATTTCTCTGCTTTTTGCTGGAATTACAGCCAAGTCAGTGCAGAAACTCCTGGTATCCTAAGGCTGAACAGAAGTTCTGACAGGGAATGATGTATGTCTTTGATTAAATTTTTTAAATGGAGTGATCAGTTACCAGAAAATGGAATCTGCTTACTCGAGAGATGCTTTCAAATTATGTGTTTCATGGAAGCAAAATTAATTAAAGAGCTTCCTGGTCAGGCTTCTGACTGGGGACGCCTGCGTGGAGGCTGACTCTGCATTTCTGGTCAGCTCCCAGGTGACGCTGCAGGTACAGGACCACGTCTCGGTAGCCAGGTTGGAGACAGACTGGCAGACGGGTTCCCCCAGCCCTTCCTTCTTACACAGCAAGGGCAGGCGGGATGCTCTCTACCACGTCTGATACGTGATGACACCACGTCCTCCAAATCACCACAGAGACCTGGGAGCCCAGCAGATGCAGAGCCCAGGGGCATCGAGACTGGGGGGCTTGCGCCCCGACTACAAAGTTCAACTTGGCCTCATACCTCTGAGTCATCCTGAAGACACTGGATAGGGGCCCCCAGCTGCAGACCGCCCCCACCAGGAGTACTTCACACGGCTCGTGTCTAAGGACAGCACCCAGGACTCAGCAAGCACACAGACCACCAGCCCCACGGCAAGACTGACAGTGACCTAGTGCCTCTCACTGCACCTGCAGGGAACCTGCCGGCTCTGTCCTCTGGTTAGTCCCCCCTTGGTGTCCCGGGTCCCAGAAAGCACCCCCAAGCCTCTCAGAGCGGGACCAGCATTCGCCTCGACCTCTGTCTGCTCTCCTGCAACTCTGAGTGGTGCTGAGGAGCCCTCATCTGATGGCCTGTGTCCCCTCCCAGCCCCGTTTTTCCGGCCCCAACCCACCTCTGCTTCGTCAGAGCTCTCGGAGGGTCTCCGTTCAGCCCCTTCTTACCTGTGACCTGGTGGTGCTGGGAGTTCGAGACCCGGTCTAGGCTGTTGCAGCGAGGGCGCATGATGGCCGATGCCTTCTCTACCTCATGCTGTTCTCTCTCAAGCCTGGCCTTCAGGAGAGCTCTTTGTCCCTTCTACAATTTTTTTTTTTTTTTTTTGAGCTATAAACAATCAAATGCATACATCTCAAGTTTATACTTAACACCTCTTGAGCTACACGAGTCACCAGCCAGCTCCAGCTCCAAGCATCTCCACCGCTCCTGGAAGGCCTCTGGGCCCTCTGGCCCCGCCCACCTCCTGCCACAGATACGGAAACCCCCACAGGTGGAAGAAACTGACTGCATGTTGATCACAAGCACACAGACCCCAGAGTAGTTGAAGCCAGGTTGATGGAGTTGACTCCTGATTACCTCACCACCAACCAATCAGAACAATGTCCTCCAGCGGATCACACACCCCATGACACCTTCTCCCTCACCATGTCTTTTAAAATCTTTCTCAGAATTTATCAGGGAAATTTAGGCCTTTAGAGCATGAGCTACCTGGACTCTCTGTTCAGTGCTGCGATAAATGCTGCACTTCCCTTCACCACCAAGGGGTGTCAGTAGACCGGCTTTACTGCCTATGGGTGAGTATTTTCTGCTTTATTGACTATGCCAAAGGCTTTGACTGTGTGGATCACAACAAATTGTGGAAAATTCTTAAAGAGATGGGAATACCAGACCATCTAACCTGCCTCTTGAGAAATCTGCATGCAGGTCAGGAAGCAACAGTTAAAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGACTATGCCAAGGCTCTATATTGTCACCCTGCTTATTTAACTTATATGCAGAATACATCATGAGAAATTCTGGGCTGGAGGAAGCACAAGCTGGAATCAAGACTGCAGGGAGAAATATCAATAATCTCAGATACACAGATGACACCACCCTTATGAAAGAAAGTGAAGAACTAAAGAGCCTCTTGATGGAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAATATTCAGAAAACTAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGATGTGGAAACAGTGGCAGACTTTATTTGGGGGAGCTCCAAAATCACTGCTGATGGTGATTGCAGCCATGAAATTAAAAGATGCTTACTCCTTGGAAGAAAAGTTATGGCCAATCTAGATAGCATATTAAAAAGCAGAGACATTACTCTGTCAGCAAAGGTCCATTTAGTCAAACCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACCATAAGGAAAGCTGAGCGCCAAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCGAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTGATGCACAGAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGACTCAGGGGGGAGGAGAAAGGCTGGCAGAGGATGAGATGGTTGGATGGCATCACCGACTCAATGGACATGAGTTTGACTAAGCTCTGGGAGTTGGTGATGGACAGTGAGGCCTGGCGTGCCGCAGTCCATGGGGTCGCAAAGAGTTGGACATGACTGAGTGGATGAACTGAACTGAGTGGGCCCAAGTTTGATCGGAGTCTGACCTGAATACCGTGGTAGGGGTGCTGCCCGGCTATTTCACTCTAAGCCGCTTGTGTCCTCCCTGACTGGGTGCAAACCCAAACCCAGAGTCACACTCGTGATGTGGACAGGACACCCCTCCACAATGAGGTGTTGTGGCTCCTAGAAAGCAAAGGACCCAATTATAAACTTGACTTTTCACTGACTGGATATTCAGTGATATTAAACAAAAACAGATTAACTTTTTTTGGTGTGATAAGGAGACTGTGGTTATTTTTCAAAGACTAAGCAAGATGTGCACACATGCGGGACTGGGTAGGAGGGGGTGGAGGTGTAGAAGAAATGAGCTCAGCCGTGTTGAGAATTACAGAAGCTTGGTGATGGGCATATCAAGTTCACTAAACTAGGCCACTCTTTAAAATTTCCCACTATAAAAAGAAAAAGCTTTTCTTTCAATTAAACATTCACAAAGATGTTTTCCTGAAATATGATACAGGGTGAGTGACTTTTAACACCCCCTGAGGGGGTGACATTGGCACCCACAGACTCCTGCATGGTCAAAGCAACAGTCACGGTGGGCACCCTGGCGGGTGGATCAGATCAAGCACTGCTCTCAGCCCTTCCAGGGCCCCCTCAACACTCAGAACAGGGTCCCTGCCATGAACTCTGGGGCCTGACACATATGGCTCCCGGCTCCTTCTCCAGCCCTCCTGTCCCTGAGACTCACCAGCCACTGTCACACTGGGCTCCTGCTCTTGAGTGCCACACACTCACTCCGGGGTCAGGGCCTTCAAGCTGGAAGGTCTCCCCAGATATACGGCTCATTCCGTTTCCAAACAGCCCCCTCCCAAAGGAGTCCTTCCATGACCAATCACACCGTCACCCACCCTCGTTGCTCTCCAGCCCTTACCTTCTTTCTTCTTTCCAGCACCTCTGACTATCTGACCTGCTCTATGTATTTCACTGTTGACAGTCTGTCTGCCACACTGAAGATGAGCTCCCCTAGCAGGAAGGTGCTCAGTCCCTACCCTACCCCCTGCCCGTCTCCAGCACAGAGGACAGGCCAAGACACAGCAGGGAGGTGCTCAGCCCCCTCCCGTCTCCAGCACAGAGGACAGGCCAGGACTCAGCAGGGAGGTGCTCAGCCCTCTCCTGTCTCCAGCACAGAGCTCAGGCCTGCACTCGGCAGGGGCAGGGAGGTACTCAGCCCCCTTCTGTCTCCAGCACAGAGGTCAGGGAGGTACTCAGTCCCCTCCTCTCTCCGGCACAGAGGACAGGCCAGGACTCAGCAGGGAGGTACTCAGCCCCCTTCTGTCTGTAGCACAAAGCTCAGGCCTGCACTCGGTAGATGGGGAGCAGATGCACAATCAACACCGAAGAGACAGACACGCAGGCTGCTGAGCAGAGCACCTCTAGAAGGGTGTCCTGGAGCCAGACATGAAGAAATGCTCGCTCATGACCTGTTGATGGACCCTCAAAGGCAAGAAGGTACCACCTTGTGAACCGAGTGTAAGCAGAAATGGCACAGAATCAAACCAACTTTGCCCGCAATGGGAGGAACCAGGCCTCAGGACAATCTGAGCAGTGACACACAGCGACTGGCTCCTGAGGTCAAAGTGGGAGTGACACACCACTGCTAAAACCAGAAACGCTTGACAGAAACGGTCATGGTCTGATAGAGCAGCTACACCCGTGGTCAAAGCCCTCGCGAAGCCAGGAGCGCTCCAGCCACCCACTGTCCTGAGCATCACATTCTAGAACTTGGGAGAACTGCCTCCTCCTTAGCAGACTCAGAGCTGCTGGAAGTCCAACAGCTTCACAAGGCCCCAGCGCCCACCCACTCCTGAAGCAGAACCTGCTCTGACCATGACCATGTGCTCACGCCCTGCTGTTCCTGTCAGGACCAAATGCCTCCAAGGTCCTGGCTTCAACTTGGCTTTTCCCACAACTCTTCTAAATCTGGACACCACTTAAGAAAGCAGGTGTGAACAGTTCAGTAAGGCGAGGTAACCAAACAGCTTCAGGTTCAGCTATGTGTATCGGGGTGGGGAAACAGCAAGAGGTGG TCONS_00096319 TCONS_00096320 r 3' 1267 TCONS_00096319 TCONS_00096320 r 3' 6733 EMBV3_14342 AAGCTTGAGAAGATGGCCCAGGATGGCCTGAAAGCAGAGACGGAAATGCTGGACCTGAGC Gene GeneID:100337338|LOC100337338:XM_002684005:2_cdna Constitutive 0 NULL GeneID:100337338 Un GENE LOC100337338 NULL protein phosphatase 1, regulatory (inhibitor) subunit 12B-like EMBV3_31215 GCTGAATGGAAATACATGCTGCCTGGGCCCTTCTCCATTTTCCAGCTAGTGCTCAGCCTG Gene GeneID:512149|LOC512149:XM_002696563:159_cdna Constitutive 0 NULL GeneID:512149 21 GENE LOC512149 NULL hypothetical LOC512149 EMBV3_28237 GATGACCTGTACCAGGCCCTGGCCAGCGGTCAGCTGACAACCTGCTGGCTGGCCTGCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15274 CCAGGTCTGGAGATGAAACACGAAACCAGCTGTTGACGAGAGAGAAGATGATGCGGGTTG Gene GeneID:788054|LOC788054:XM_002687918:97_cdna Constitutive 0 NULL GeneID:788054 5 GENE LOC788054 NULL similar to Bcl-2-like 13 protein (Protein Mil1) (Bcl-rambo) EMBV3_43622 GTCTTTTTAGATCCCCACCAGGGCGGGCAATGGGATTACTGCCTGCCAAATCGTCAAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07252 GACTCCATTCGAGACCCAAAGAGGCACCAGCGAAGCTTTCAAGAGAGACTGTGGAAGTCA Gene BVT0102_201850 + 0 NULL GK000024.2:58628788-58659024 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10666 TGGGCTTGAGTTCCATCCACCTGATAATACAGACCTGGCTGGGAGAATTAGGGACAAGAG Gene GeneID:531327|LAMP3:NM_001102135:40_cdna Constitutive 0 NULL GeneID:531327 1 GENE LAMP3 MGC148379 lysosomal-associated membrane protein 3 EMBV3_30909 TCCTGGCTGACCTCCACAGCGCAGATCAGTTGAAAACTCAGGCAGTGGATTTCATCAACT Gene GeneID:530618|SPOP:NM_001075936:123_cdna UTR3_Alt 3 NULL GeneID:530618 19 GENE SPOP MGC139890 speckle-type POZ protein EMBV3_04743 GGACGGGACCAACGTGAACAACTGGCACTGGTATCATTAGAGAATCTGGTGCGAAGCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03222 AACATCCACTCGCATGGGCTTTGGAGCAACCTTCGGGAGATCTTTCTACCTGCTACTGCA Gene GeneID:514338|ZDHHC4:NM_001035292:173_cdna Constitutive 1 NULL GeneID:514338 25 GENE ZDHHC4 NULL zinc finger, DHHC-type containing 4 EMBV3_25852 CAGTAAGGACTACGTACCCAATCACTCTCTGCATTGCCGTTTTAAACTGTTGCTTTGACC Gene GeneID:782518|LPAR6:NM_001101284:226_cdna Constitutive 0 NULL GeneID:782518 12 GENE LPAR6 P2RY5 lysophosphatidic acid receptor 6 EMBV3_20481 CGTGCTTTTGTGAGAGCGTTCTTGATGGGGGGTCTCTGACATCTTCGTGGAGTTTAGGGA Gene GeneID:533847|ZNF532:XM_002697837:536_cdna UTR3_Alt 2 NULL GeneID:533847 24 GENE ZNF532 NULL zinc finger protein 532 EMBV3_28433 GCTTGCCGGCTCCCTCCTGAAGAAAGAGGCTTCTATGTTTAATCTAACTCACAGAGGGAG Gene BVV0102_003787 + 0 NULL GK000017.2:4707559-4732240 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10435 ATCCTAAGGGAGCAGGAGAGGACTAAAATGGAGATGCTTTCGGCAACTTGGCACTAAGCG Gene BVT0102_073085 + 0 NULL GK000030.2:32111605-32309002 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250082 1 XLOC_153025 NonCoding TCONS_00250082 XLOC_153025 NonCoding NonCoding - X:32304869-32305679 - TSS187303 810 1 TCONS_00250082_1 64 0.203703703703704 1 0 3.35943831910999e-05 0.000148865786172607 0 0 1.21905591957018e-05 0 0 0 0 5.07962262410896e-06 1.69569432729622e-05 8.82886724380933e-06 0 0 0 0.000782566821448152 0.000543162510317475 3.09764432081788e-05 9.73830937181545e-05 0.000150931197598501 0 0.000109935808951911 0.000226519836289213 0.00014487962762226 5.13219553745721e-05 9.56792750944305e-05 8.6802191292415e-05 0 0 0 XM_005262333.1 IDS PREDICTED: Homo sapiens iduronate 2-sulfatase (IDS), transcript 2e-85 320 72.10 0.725925925925926 0 noncoding 0 0 0 0 -0.160097724490882 0.204927800163228 -0.00140265706973437 0.98492218485008 AGGAGAGGAATATGAATATTTATTAAATCTCTAGATTGGGATGGGTCTCATGTTTAATAGGAAAAGACAGGGAAGAAATCACATAGGAAAAGAGCAATTTGTTTGATTACTTAAGAAAGCAAAACCCGAAATTTAAAGGCAAACTCACATGAGATATACAAATGCCCAACAAATGTACACAGAGAACAATGATCAAGGCCATTAAGAAGCAGAGAATTCAAAGCTCAAATAGGATTCTACTTTCAGCTATTATTGGGAGGGTGGGTTTTTTTGTTTGTTTTTATGGTCTGTATTATCTGTATCCTTGTTTGCTTTATTTTCAGTTTTACTATCCTAAGGGAGCAGGAGAGGACTAAAATGGAGATGCTTTCGGCAACTTGGCACTAAGCGTCCATCCTAAGGGATTAATATGAAACACACAAAAACATTTTATTCATAAAGTTGCTTATCACAACATTATTTACAATACTGAAAATCTGGAAATTGACTAAATTGCCAATAACTGAAAGAAAGTTTAGAAAATTAAGATAAAACTACACCACACAATATACCACCACCAATATAAAGTATCTGTAATAACCACATAGGAAAATAGGAATATAAAACTGCATGATAAAGCACATGGTATGATTACAACAGTGTAAAAAATTTACACCCCAAAAAGGCAAGATATTTAGCGACTATCTTGGTGTAAAATACTGATGTGTTTCCTTATCTTTTATTACATTTCTGTTCTCCATTTTTTTCTAAACTTAACACATTAATTTTACAATCAGAAAAAAAAACCTTTTATTAAAGTAAGGTGCCCAC TCONS_00246654 TCONS_00246655 . 3' 138 TCONS_00246654 TCONS_00246655 . 3' 947 EMBV3_17223 CAGTGAGCTATTGGTATCTAGAGGATCCGTAGAAGAGACTATTCAAAGTTTAGCTTTAGG Gene GeneID:538404|MYOM1:XM_002697737:226_cdna Constitutive 0 NULL GeneID:538404 24 GENE MYOM1 NULL myomesin 1, 185kDa EMBV3_15527 GGGTGAACCTAGAACTTGAAATGCTTCCTACTGATCACGGCACTTTTTACATCCGCTGTC Gene GeneID:282136|ADRBK2:NM_174500:8_cdna Constitutive 0 NULL GeneID:282136 17 GENE ADRBK2 GRK3 adrenergic, beta, receptor kinase 2 EMBV3_15369 TCCGAATGTATTGGACAGCTTTTACTGTGATCTTCCTCGGCTCCTCAGACTGGCCTGTAC Gene GeneID:785623|LOC785623:XM_002690709:359_cdna Constitutive 0 NULL GeneID:785623 10 GENE LOC785623 NULL similar to olfactory receptor, family 4, subfamily F, member 29 EMBV3_00062 TCACAGGAGATGTTTGTTTCAATTGTGGGGAACCAGTTCAAGTGGAATGGGAAAGGGAGT Gene GeneID:523367|SHCBP1:XM_002694769:551_cdna Constitutive 0 NULL GeneID:523367 18 GENE SHCBP1 NULL SHC SH2-domain binding protein 1 EMBV3_02606 TCTGCATCTGTGCTCTTTGAATATCGAGCCCGCCGATTCCTGTCACTGCCTAGTACTCAG Gene BVT0102_067291 - 0 NULL GK000019.2:27052239-27068572 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092953 TCONS_00092954 TCONS_00092957 TCONS_00092958 TCONS_00092952 TCONS_00092962 TCONS_00096032 TCONS_00092951 2 XLOC_057031 XLOC_057862 Coding TCONS_00092962 XLOC_057031 Coding Coding LOC100848357 19:27060740-27068381 x TSS69844 2365 1 TCONS_00092962_4 428 11 0.691884816753927 0.000455541547630509 1.32504033357893e-16 7.61279319868746e-05 0.000277408314713358 0.000356197593709194 0.000130340969116131 0.000154841871497032 0.000197574541337277 0.00010219040446538 5.56717715320248e-05 4.83970961262495e-06 7.55959713439412e-07 0.000675160996123871 0.000182915741423338 0 5.79611178785454e-103 0 0.0003997570140234 0.00124874534754505 0.000353529572320178 3.34562999004667e-05 2.68137459042856e-44 0.000797671068789456 1.40417874867661e-44 0.00102293463059852 1.01111534986129e-05 0.000643408397248433 5.27853286219185e-05 0.000175114023764811 0.000104229227796205 XM_005220176.1 CAMTA2 PREDICTED: Bos taurus calmodulin binding transcription activator 2 (CAMTA2), transcript variant X2, mRNA. 0.0 3873 100.00 0.907399577167019 NM_001171166.1 CAMTA2 Homo sapiens calmodulin binding transcription activator 2 (CAMTA2), 0.0 2711 88.07 0.908668076109937 TCONS_00092962_4 sp|O94983|CMTA2_HUMAN CMTA2_HUMAN Calmodulin-binding transcription activator 2; 0.0 743 91.18 0.997663551401869 1 coding GGGCGTGAGGGGCCCCTTTCTGCATCTGTGCTCTTTGAGTATCGAGCCCGCCGATTCCTGTCACTGCCTAGTACTCAGCTTGACTGGCTGTCACTAGACGACAACCAGTTCCGGATGTCCATCCTGGAGCGACTGGAGCAGATGGAGAAGCGGATGGCAGAGATCGCAGCAGCTGGGCAGGCCCCCTGCCAGGCTCCTGACACCCCTCCAATTCAGGAGTGTGGAGACAGGAAGCCTGGACTTGGAGCAAGAGGTTGACCCACTCAATGTGGACCACTTCTCTTGCACCCCTCTGATGTGGGCTTGTGCCCTGGGCCATCTGGAGGCTGCTGTGCTCCTCTTCCGTTGGAACAGACAGGCGCTGAGCATTCCTGACTCTCTGGGCCGCCTGCCCCTATCCGTGGCTCATTCCCGGGGTCATGTGCGCCTCGCCCGCTGCCTGGAGGAACTGCAAAGACAGGAAGCTTCTTCTGAGCCCCCACCTGCCCTGTCTCCACCCTCCTCCAGCCCCGACACTGGCCTGAGCAGTGTCTCCTCACCTTCAGAGCTCTCGGATGGCACTTTCTCCGTCACATCGGCCTATTCTAGCGCCCCAGATGGGAGTCCTCCCCCTGTTCCTCTGCCAGCCTCTGAGATGACTATGGAGATGGTCCCAGGCCAGCTCTCCTCTGGTGCCCCAGAGGCCCCCCTATTCCTCATGGACTATGAAGCCACCAACTCGAGAGGGCCCCCACCCTCGCCGCCTCCTCTCCCACCAGCCCTGGATGGCGGGGCTGCTCCTGAGGAAGCCGATAGTCCACCAGCTGTGGATGTGATCCCGGTTGACATGATCTCACTGGCCAAGCAGATCATTGAAGCCACACCAGAGCGGATTAAACGAGAGGACTTCGTTGGGCTGTCTGAGGCTGGAGCCACAATACGGGAGAGGACGGGAGCGGTGGGGCTCAGTGAGACCATGTCCTGGCTGGCCAGCTACCTGGAGAACGTGGACCATTTCCCCAGCTCAGCCCCTCCAAGCGAGCTGCCATTTGAGCGGGGTCGCCTGGCTGTCCCTCCAGCACCTTCCTGGGCAGAGTTTCTCTCCGCATCTGCCAGTGGCAAGATGGAGAGTGACTTTGCCCTGCTGACCCTGTCGGATCATGAGCAGCGGGAACTGTATGAGGCAGCCCGAGTCATCCAGACAGCCTTCCGGAAATACAAGGGCCGGCGGCTGAAGGAACAGCAGGAGGTAGCTGCTGCTGTGATCCAGCGCTGTTACCGGAAGTACAAACAGTTTGCACTCTATAAGAAGATGACCCAGGCGGCCATCCTGATCCAGAGCAAGTTCCGAAGCTACTACGAACAGAAGCGATTTCAGCAGAGCCGCCGAGCGGCAGTCCTCATCCAGCAGCGCTACCGCTCCTACCGCCGCCGGCCCCCGGGGACCCTGCCTGCCCGCAACAAAGGCTCCTTTCTCACCAAGAAGCAGGACCAGGCAGCCCGGAAGATCATGCGATTCCTGCGGCGCTGCCGACACAGGATGAGGGAACTGAAGCAGAACCAGGAGCTGGAAGGGCTTCCCCAACCCGGGCTGGCCACCTGACCTCTCCACTGCCTTTCTCATCACCCTGGGGGCCGCTTCTTGCAGTCTTAACAGGGAGAGGGCTCTCTGGGGGAGGGGGAGCCCCCTGTCGGCAGCTTTCCCGTCACTTTTGTGCTAGCCCGTCCTGGGTCTCCACCCCCCACCCCTCCGAAGTGCTGAACTCCCTCTCCCACCCCTGCCTCCTCCTCTTCCCTCCGGGTCGCGCTCCCTTCTCTTAGTCCCCGGCTCCAGAAGACCCATGCCCCACATACCTGCATCTTCAGCTGTGACCTCCGGAGCCCTGCCTGCCCCTTCTCCACAGCTCCCTCCCTGCCTGTGCCCACCTCGGCCCCTTCCTGACTTGCCTTATTTATTTGTTCGACGCGTCTCTGAATGTATCCGCCTCGGTCCCACCTCTGCCTTCGCTACGCGCGCGCCCCTCGTGTTTCAGGGCTGACCGTGCCCCCACCCCGACTCCGCATGTTTGCGTCTTGTTTCCTCCCTTTCTGGCCCTGTCTTTCCCCGTCAACTGACCGACTCCGGCCACCAATCTCGGGGCCAAAGGGGGGCTGTATATAGAAACGCGCTGCGGAGTCCTGCCCCGTCCCCGAGGGGAGGGGCCTTGTACATAATGTAACATACAGAGTATAGTGAAGAATCTATTTAAGGCGCCGCAGGGAGGGCTGCACGGCCGGGCTTGTGGTTCCTGGCGCGGCGGGAGCCTCCTGCCGGCTCCACGAGCACTTTCTACTTGTGCATGGGCTTGGTTTCTACGAATTGCCATTAAACATCGCTGCACCAGCC TCONS_00096032 TCONS_00096034 TCONS_00096034 r 5' 0 TCONS_00096032 TCONS_00096034 TCONS_00096034 r 5' 0 EMBV3_38546 CCAACCTGATGGGTCCAGAAACTCTGAAAGGACATTGCTGGACGGTTCCTGGCTCAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24881 TGCCCACGTTCTGCATTTCCATTATGTGCCAGACTCCTTTACACCACAGCTGAGTAGAAC Gene BVV0101_070686 + 0 NULL GK000030.2:139064461-139567324 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245965 TCONS_00245966 1 XLOC_150864 NonCoding TCONS_00245965 XLOC_150864 NonCoding NonCoding - X:139184769-139254428 - TSS184531 554 1 TCONS_00245965_3 61 2 0.992075569209567 0.000415199090614929 0.000365204764393289 0.000317376184465321 7.49472429184853e-05 4.45593224758966e-05 0.000234596464015395 0.000185968621090994 0.000443781976198005 0.000373253486207197 0 0 0 2.58960526800451e-05 9.55235323902862e-05 9.29872530930016e-05 0 0 0 0.000119426430292802 0.0001203152185254 4.10974492148558e-05 0 0 0 9.43607264217978e-05 2.54349707735262e-05 0.000164195690907778 0 8.76285182730295e-06 0 XR_250631.1 LOC101928302 PREDICTED: Homo sapiens uncharacterized LOC101928302 (LOC101928302), transcript variant X2, misc_RNA. 9e-49 197 74.20 0.546931407942238 0 noncoding 0 0 0 0 -1.00058672528299 0.0309175540948499 -0.0771151694711762 0.177650454172162 AGAGATGCCTATTTACATCTGGAGAATCTGCTCCTTGAAGAAATCTTGAGGAACATTATTCCAAGATGATGGAAACAAAGAGCCTCAAAGAGTTCTAATGGCATACCCAAGGTCATCTGTCTGCTTCCTAGTTGAATGTCTGTGTTCTACTCAGCTGTGGTGTAAAGGAGTCTGGCACATAATGGAAATGCAGAACGTGGGCATTTGATTCAAAGAAAATAATCCAGGTTATTCTCATTATGGTCTTGTTTATGATTAAAGTTTAGAATAAAGTGGTGATATACCAGTTGTGTATTCTTTAAAAATGTGCCGCAATTTATTTTAGATGATAATGATTGAGTACCTACTGTGTGCAGGCCACTGGGTTAGTGGTACATGGTACCCCATAAACCTGTCTGTTCTTTTACATGGGAAACAGGATATTACTCTCTTTGCCTTCAGAAACCATATCTCTCTTTTTGTAAAATTTCTTTCCTCTGAATCACTTGGAGCTCTGGCTCCTGATATTTAAAGAAAAACTTTAAAAATAAAAAGTCCTATTTTCCCCCTCAAAA TCONS_00248524 r 5' 128611 TCONS_00248524 r 5' 128611 EMBV3_06128 AGCCCAAGCCAGAGTTGGCAGCAATGAATGGAGCAGATCCCATATCCCCTCAGCGGGTGA Gene GeneID:504853|PRRT3:NM_001075177:44_cdna Constitutive 0 NULL GeneID:504853 22 GENE PRRT3 MGC143144 proline-rich transmembrane protein 3 EMBV3_41362 CACTTTTGTAACCCCGTACATAGCTGTATTCACAATTCGTCCTGCCCTCTCCTGTGAGGC Gene GeneID:786454|MRPL34:NM_001110187:137_cdna Constitutive 0 NULL GeneID:786454 7 GENE MRPL34 L34mt MGC134251 MRP-L34 mitochondrial ribosomal protein L34 EMBV3_20012 TGCAGAAAATGCCACCTCCCACATCACCAGAAAACCCACAATGAGGACAATATGAGCGCC Gene GeneID:789715|LOC789715:XR_083956:85_cdna Constitutive 0 NULL GeneID:789715 18 PSEUDO LOC789715 NULL similar to zinc finger protein 17 EMBV3_37894 AGGAAGTGCCTGTGAGATAAGCATCGCTGTCTGGACGGTCTCTGTATTGTGTATGGACTG Gene GeneID:532460|ZNF691:NM_001075962:212_cdna Constitutive 0 NULL GeneID:532460 3 GENE ZNF691 MGC139625 zinc finger protein 691 EMBV3_03848 TTTGAAAGGGCAGATGGGTCCGTTGGCAGCAGCGGTTTCACATCTACTTCCCTACTCTCT Gene GeneID:100294908|LOC100294908:XM_002699218:46_cdna Constitutive 0 NULL GeneID:100294908 29 GENE LOC100294908 NULL similar to expressed in prostate and testis EMBV3_10890 TTCTCAGCAGCATCACAGGTCACCAGGACTTAGCCAACATGTGCACCCAGGACTGGAACT Gene BVV0102_366105 + 0 NULL GK000006.2:107897731-107907117 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210729 1 XLOC_129239 NonCoding TCONS_00210729 XLOC_129239 NonCoding NonCoding - 6:107904629-107906072 - TSS158236 1443 1 TCONS_00210729_4 89 0.0859320859320859 1 0 9.42875307300186e-06 0 1.28260635117691e-05 0 0 0 0 0 0 0 3.17281558269463e-06 0 0 6.51974115630311e-06 0.000309400221401621 0.000256245678752108 0 0 0 0 0 9.7708004816972e-05 7.62913620813786e-05 2.32358125022175e-05 0 7.81202717930715e-05 0 3.32819267518557e-05 0.000127841553676459 0.000124994953800739 XR_235052.1 GRK4 PREDICTED: Bos taurus G protein-coupled receptor kinase 4 (GRK4), 1e-154 551 100.00 0.210672210672211 0 noncoding 0 0 0 0 -0.0526808894522093 0.613578132226429 -0.0611301395516808 0.251528105651185 ACTTACATGTGCCTCCTTACCTAAGCTCTACAGCACTGTAAGGCAGTCTGTTTGGTACAATATTCTCTATTGTACAATATTCTCTATTCATTCATTATACCCAGATATAAAAGCAGAGCAGAAAGAAAACAGGTTTAGCCTCAGTCAGATCTGATTTCCATGGAGCATGGTCCACTTCTACGATCAGTGTTGAGTTCAGAGTGAGGGGCGCCAGATGACAATCAACACCCCATCTTACTCAGGACTCCCCACGGCCTGAACAGCAAAGCAGGACCCGGCTTCTCCCTACCCGTCTTCCGTTCTACGCAGAGGGGTTCAAGTGAGCACACAAAAATATTGAGGTCTTGATTTTCAACTCCTAATACAGCAAACACTTTACATAACAAAGTTCACTACGTCTGAACTCAGAATCCCTCCGTTGTAACCCCTAATTCTCTGCATCACTCACTGTGACTTCAAGAATTTCCTGCACAGTGTTTCTGATGCAGTCTCCAAGGTGTGAAAAACCATGCACATTTTAATCAAGATCTTTCTTCTTGAACGGCTGAGGATACAAATGGGAAGGAGGTGGCTTAAAAAGAGAACTCCCCAAGTCTGATATTCCAGTTTAATTTCTCTTACACAATGTTAAGCACTAATCACAAGATGAACTGATTGATGCTTCTCAGCAGCATCACAGGTCACCAGGACTTAGCCAACATGTGCACCCAGGACTGGAACTCTGAAGCCCTGGGAGACAGAACACAAAATACTTCTTCCAGATTGTATTAAATACACATCCTTAGGAGGGCACTTACTCTGTTGCCAGCACAAAGATGAAGCGGCTGACCCCACACCGAATCCCTAAGAGCAAAGGGGCTGAAGAACTATGGGTGGGCTCTGCCTCCAGCTCTCCCATCTCTCCAGGAGCAGCAGAGGGGTCACCTCCCCAAAGAACTATATTCCTAGGGTCAGCAAGCAGAAGGGCTGGCCCAACTGCTGCTTCTACATGGCGACCAGCATGAATTCTTCCTAATGTGTTCAATCTCTCCCTAAAGATTTAGCCCTAAGCCGGGCTAAAACCCACTCTACACAAGTCTGGACACCATCAAACCTCAAACCCAAGAAGAGATGCTATGGTAACAGTCCCCCGCTCTTGCCTGGGAAATCTCATGGACAGAGGAGCCTGGCAGGCTACAGTCCACCGGGTCGCAGAAGAGTCGGACACGACTGAGAGACTGAACAACAACAATAGACACTTAAGTGAAGGGTCTCCCAGGGTGGTTCACAGGATTCTCTTCGGGGGCCCTTTGAAGACCACAAAGGCACGGTTCTTTGCCGCTGGCTTTACTGGTTGGTCTGGCCTCCTCTCTTGGGGACAGATCACACTGCTAGCCCGACGCTGAAGCCACACTGCGTCCCGAGGTTCCGGAAGGAGGGCAGGACAGGGGATCAAGAGCAGAC TCONS_00206148 TCONS_00206149 . 3' 254 TCONS_00206148 TCONS_00206149 . 3' 1696 EMBV3_16719 AAAAGGGACCGGCGCGTCCCTTCTACACCCTCTCCGCTCCACCTACTTGGGACCCTAATA Gene GeneID:100335569|LOC100335569:XM_002699378:331_cdna Constitutive 0 NULL GeneID:100335569 29 GENE LOC100335569 NULL hypothetical protein LOC100335569 EMBV3_35873 TAGAAAGGTTGCCCCAAGGTTTATTCAGTAAGCAACAGAACTGGATTTGCGAGGTCCCAG Gene GeneID:517589|NUDT9:NM_001101096:19_cdna UTR3_Alt 2 NULL GeneID:517589 6 GENE NUDT9 NULL nudix (nucleoside diphosphate linked moiety X)-type motif 9 EMBV3_31603 GGTGACAAAAAACCTCCAGCCACTTACAACATCATTGAAGCCGCTCATGTGGTCTCCCAC Gene GeneID:535207|CCDC65:NM_001038166:92_cdna Constitutive 0 NULL GeneID:535207 5 GENE CCDC65 MGC133899 coiled-coil domain containing 65 EMBV3_30682 AATGTCTGATGCTGGACTAGGGCCTGATGCTTGGGAACATCTGATGCTGGACTTCGTTCT Gene BVT0102_120006 + 0 NULL GK000021.2:60865322-60883714 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121789 TCONS_00121790 TCONS_00121788 TCONS_00121786 TCONS_00121787 TCONS_00121784 TCONS_00121791 TCONS_00121785 1 XLOC_073484 Coding TCONS_00121784 XLOC_073484 NonCoding Coding LOC100848264 21:60875319-60880390 j TSS90637 2913 2 TCONS_00121784_8 92 0.0569859251630621 3 0.42603550295858 0.000401748248944648 2.6423463211345e-64 0.000124259963908812 0.000516044040945929 8.62304975407109e-05 0.000236909156697626 0.000172285811308061 9.25757967259125e-05 0.000145249897203945 7.48687024019666e-06 1.47900310385452e-05 2.51293638827252e-59 3.07672422908691e-05 1.42456646662037e-30 1.17420567354868e-06 0.0014103971569146 0.000580208945165322 0.00159084248854046 0.000356934319850796 0.000411614879473073 2.66286836490796e-35 0.00155907592283559 0.000460762826967629 0.00152568250823812 0.000214251326975885 0.000101274198775313 1.74421798415192e-17 9.405936184721e-08 3.16716645022558e-05 0.000935482632580102 XM_003587596.2 LOC100848264 PREDICTED: Bos taurus liprin-alpha-2-like (LOC100848264), 0.0 3804 100.00 0.723652591829729 NM_003626.3 liprin Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 7e-129 466 82.64 0.163405423961552 0 noncoding 0 0 0 0 -0.0570609256710494 0.626432706588582 -0.103665863845621 0.109834017371026 CACACTCGACAGGCTCTCAGGACAGCCCTGGGAACAACCCCAGCAGCAGCACCAGCAGGCAGGACTCGCTGCACAAAGCCTGGAAGAAGAATGGCATCAAGTCCTCCATCAGCCACTTGTTTCACAAGAAGGAAAAGGGCTGGCCTGAACACCCTGGCAAGGAGGCATTAGGACCAGGCAGGATCTTTACCCCTAGCGCCACCTGGAAAGCCCCAGTGAACGCTGACAACTAGAAATGCAGAAAATAAGGGCTGCTCCTAAGTTAAACTGGAAGAGCAGCAAGCACAGGTTGTAAAGAGGAAAACACACGATGAGCCACAACAGCACCAACAGAAACAAGGGATGCGTTCACCCACATAAAGAAAATATCTGTGCCATTCGGAAGAGGAGCCCGTCAGCCCTTGGAGGGACAGTTGGAACCAGAATGAAAACCGAGGCCATGGTCAGCAGTGCCCACCACATGGCCTGGGTGGCGTGGTGTCACTCACCAGGCTTCCTGTATCCCCAGAGCTGCTGGCAGTAACATCTCTGAGTGCTAGGCTGGGCAGCGTCCCCGTGTGAGCTAAGGCATCACTACTCTCCTTCCAGTGCTGCTGTGGGGCCCTCTGTGGGGGGCCACCCTCATCCCCTGCCCTGCCACCCTCTGGGGCCCAGCTGCCCCCAGGGATCCTTTCAGCCCTTGAGCTTGGGTGTTCCCAGCCCTCTGCCACGCCGGTCTGGGACATGACTCAGGACTTGGGCTTGAGATATCAAGGAGACCGTGAATCTGGAAGGATACCACCCTGGGGCCCATGAGAGAGCAGGAGAGCAAAGCTCCCACGGGGAGGAAGCAGAGCTGGGGAACGTGCCCACAGCCTCCACTGCCTCCTGCACAAGTGCCTCTTCTTTGCCTCTCCTTGACCTGAAACAAAGCCCAGCTGCTGCTGCTCCACAGGTGATTCCTAAAGATGCATCTCCTGCCAGAGCTATTGTCCTGCTGCTCTGGGGCTGCCTGAGTGTGCTCAGGAGCGTCAGACAAGTAGGGTTGCCACACCTCATACTGGAGGTGGGGGGCCTGATACTGGGGAAGGGTTGGGGGGTGGGGGAGGGCCTTATGCTGGACTAGAGCCTGATACTGGACTAGGGTCTGATGCTGGGGGAATGTCTGATGCTGGACTAGGGCCTGATGCTTGGGAACATCTGATGCTGGACTTCGTTCTGATGCTGGGGGATGGCCTGATGCTGTGGGGCACATCTGATTCTGGACTAGGGCCTGATGCTGTGGGAGGGCTTGATGCTGGGGGGAAGGTCTGATGATGGTGGGCAGCCTGCTCCCAGATGTACATGAAGTTGAGGATAAATCTCTATGGGAAATCTTTTTTTCATACTTTCCTGACCAGCTTGCTATGTTCTTTTTAACTTAAGGATCATTTTGTGCAATATCGGTTGATTTCTGCCATACATCAACATGAATTAGCCATAGGTGTACGTATGTCCTGTCCCTCTTGAATCTCCCTCCCACTTCCCCTTGCTACATTCTTGTTTCTATGGATATATGAATAATAAAGACCGTTGACTAAAATAACATGAAAAGCTCCCACACACAAGTGTGCACGTGCACACTCCCTTGTGCATTATTCGGGTCCACGAGAGGGCCCTGTCCCCGCAGATGCTGAAGTGATGGAGCCTCTTGTCTCCGGAGCCAAGGGCATGAACACACTGTCGGTCGTCCTCTAGGGACACCTATGCTTCCGCCTTCTGGCCTTTCCATTGCATCCGTCCGTTTCTCTTAACAGAATGTCCCTGTGATGACACGGGCTCCCGTTACCAGCTCTGGTCTGTTCTCAGTGAGAGTACAGCTTACCCTCAGCACTCTTTATTGGCCCTGGGAAATTTTGCTTCAGTACTTTATTGAAAGAAAGCAATAAATAATACTGTGATAAAAATAGTTCAAAAGTAGACTGTACATACTTTGTCACATATTTGGGAAGTTCACAAAAGATTAATAGGAAAATAGAATGATAACAATGAATTGTACAAGTAAATTAAAGGCGGAACCCACATGTAAAGAGACATGCTGTCTCTGTCTACCGAGATACCAGCTGCATAATAAATATCGCACCATGACCTGAACGCATCTCTTGCTGGCTTTTAATGTGCCGCTGAAAAAGTAAAAGTTACATTTGCTACTTATACAATCCAGTATGGCTATGTCATCACAATCTAAAAATGTATGCTTAGGTCCATTCTTTAAACATGTTTACAAACAGATGTAAAAAGATGATTTACATAAAAATAAGGCCTTTGTCAGAGCTGCACTATGCTGTCTGGAAAGTGGCACCTTCACTGTCCAGCTCGATGGCTCCACAGTGGGTGCAGGGCATCGCAATTGGTACCCGAAGAGTCTCACCAGAGAAGAGGGATCCAGGTCCACAGAGGGATCCAGGTCCACAGAGACTAGGTTATGGGAGAGATTTTCATAGTCTTCTTCTAGTCATCCTTTCAGCCCAAATTTCATTAGAAGCTCACATTTAACACTCAGTACTTTTAAATCACCTCACGCTGCGGACAAAAAGCATTTCTTGCTAGAAAAAGTACAGTTTAGGCCAGTCAAAATCCAATAACAATTGGTTGAAATTAAGTTTGCTTATTTCAGAGTGATTGTTGGAGAGCTTGGTTACATTCTGGAAGGATAATGTACACCATGTCATAATGATTTTACAATTGTAGGAAAACCCCTTCTCTCGTGGTTTAACATTTAAAAATTAAACAATAATTACAATAAATGCACTATTTACAAAAGCCCTATATTTGTTCATAGGATTTATACAGACAAGTACTACAGTACATTCATTTGAAAGACTAAAATCAGGTATCAGAACATGAATTGATCTGAAAGGTTATTTATAGCCTGAATATACAAGAAAAAGTAAG EMBV3_03157 GTTATAAGAAAACAATCGCCCAGGTCTTGGTGCACCTGCACAGAAACGACTATGTGGCGG Gene GeneID:509041|NAPG:NM_001046022:71_cdna UTR3_Alt 2 NULL GeneID:509041 24 GENE NAPG MGC137662 N-ethylmaleimide-sensitive factor attachment protein, gamma EMBV3_13156 CTGATAGTATACAGAGGAAAATAGTAGACATTCTCACAAATGAACTGATACAAACATCCT Gene BVV0102_076793 - 0 NULL GK000008.2:97211921-98079452 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04730 AACGGCCTCTACTACATCCATAGGAACAAGGGGAGCGGGACTACGGCCCCCCCATTGATC Variant GeneID:520580|CDK9:NM_001014935:112_cdna 468^639 1 EMBV3_43592 GeneID:520580 11 GENE CDK9 MGC139578 cyclin-dependent kinase 9 EMBV3_02336 GGTTTCAGAGGGAGGGGGCATGTATATACCCATGGCTGATTCATGTTGATGTATGGCAGA Gene GeneID:617625|RBM43:NM_001099168:160_cdna Constitutive 1 NULL GeneID:617625 2 GENE RBM43 MGC159967 RNA binding motif protein 43 EMBV3_23677 ATACCGGATCTACCGGCTGAAGGCTCGGGGTTCCACCAAGATGTCCATACACCTGATTCA Gene GeneID:510275|HIGD1B:NM_001077896:233_cdna Constitutive 0 NULL GeneID:510275 19 GENE HIGD1B MGC149003 HIG1 hypoxia inducible domain family, member 1B EMBV3_15802 TTACTGATTGTTCGATATGCTAACCGTTCTCAGCCCTGAAGAGAAGGGCTCCGACACCTC Gene GeneID:539959|ITM2C:NM_001081538:160_cdna Constitutive 0 NULL GeneID:539959 2 GENE ITM2C MGC142814 integral membrane protein 2C EMBV3_36977 CTTAAATACAACAGACCCTAGCAGTACATTTTTTGCACAGTAATAAGTTGACTCACACAG Variant GeneID:613808|CLK1:NM_001102271:137_cdna 658^824 3 EMBV3_35225 GeneID:613808 2 GENE CLK1 MGC148790 CDC-like kinase 1 EMBV3_26857 GAGTAGACTCTTTCTCCTTGGAGCCTCTGATGTGGGGGAAATGTTATACAAGCTAAATGC Gene GeneID:529618|GRIA1:XM_002689318:29_cdna Constitutive 2 NULL GeneID:529618 7 GENE GRIA1 NULL glutamate receptor, ionotropic, AMPA 1 EMBV3_32198 GCCCATTTTCAGAAACAGCTGTCCGCAGAGGAAGGCTTTACGATCTTGGGTGGTCAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35294 CCTGATAGCCTTGGTCAGCATCCATAACCCCCTCGATGTTCCCTTGGAAGACTGTGTGAT Gene GeneID:281754|EPB42:NM_174312:115_cdna Constitutive 0 NULL GeneID:281754 10 GENE EPB42 NULL erythrocyte membrane protein band 4.2 EMBV3_37585 ATGTGGATGGTGGCCTTTCCTGTGCCCCTGGCATTGTTGTCCATGTGATTGTGATGTTTC Gene BVV0102_175174 + 0 NULL GK000015.2:24733112-24774074 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07876 GGCCCTCTCCTGAAATCCAAGCCACCCACATCATTCTTCTCCTAGTCAGCTGCTTTGTCT Gene GeneID:100139864|BOSTAUV1R403:XM_002695191:869_cdna Constitutive 0 NULL GeneID:100139864 18 GENE BOSTAUV1R403 NULL vomeronasal 1 receptor bosTauV1R403 EMBV3_34856 AAGGGGAAGAAGACAAGAGGAAGAACAGAGTTGGGAGGGGCAATAAAGCAGTCAGTGAGG Gene BVT0102_130962 + 0 NULL GK000030.2:18629816-18687076 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00554 AGACGATGGTAGCAGAAAGCAGACCAGCTCCTTTTATGCAGACACACCACCTTCTGTTGC Gene GeneID:524074|LOC524074:XR_084719:78_cdna Constitutive 0 NULL GeneID:524074 9 PSEUDO LOC524074 NULL similar to Regulatory factor X domain-containing protein 1 EMBV3_25416 ATGGAAGAGCTAACCCAGCAATATAAGACCTTCAGCAACTGTCTGCACAAAGGCCCACAG Gene GeneID:614404|HAUS7:NM_001102277:82_cdna Constitutive 0 NULL GeneID:614404 X GENE HAUS7 MGC160031 UCHL5IP HAUS augmin-like complex, subunit 7 EMBV3_42954 TTTTACAGTCAGTTCCCATCATGCCTGTGTGCCACCCTCGGCCGCAAGAGACGGCACAAA Gene BVT0102_104554 + 0 NULL GK000005.2:111372219-111423286 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00961 TGTGTAACCAGAGGAGCAGACTGAAGAGACAAAAACTCCTGGCTTTCTGAAGCTGTGGAC Gene BVT0102_017348 + 0 NULL GK000005.2:57527397-57532244 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34589 AAGAAGACCCGAGTTTACTACAGGCTACCCCAGAGCTACCGCCAAGACTTGCTGGCGGAT Gene GeneID:538670|LOC538670:XM_002686378:181_cdna Constitutive 0 NULL GeneID:538670 3 GENE LOC538670 NULL similar to Protein FAM151A EMBV3_05569 TCTCTTTTATTTGGTGCTGAATATGTCCTTGTAGGCTGTTTTAAGAAAACAACATGTGGG Gene BVT0102_031408 + 0 NULL GK000007.2:93053099-93240414 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217986 TCONS_00217984 TCONS_00217985 TCONS_00217983 TCONS_00217987 1 XLOC_131616 Coding TCONS_00217986 XLOC_131616 Coding Coding ARRDC3 7:93234509-93253113 j TSS162191 8397 1 TCONS_00217986_4 194 0.15005359056806 8 0.549051228296511 7.50760338705964e-09 2.29494628757119e-09 5.43476996310796e-09 6.82007867155368e-09 1.29665244023971e-09 1.19139673955022e-09 4.21613613185602e-10 1.3956576084975e-09 1.55329824047043e-09 8.14656980677226e-06 4.67190827767397e-09 4.11469100517548e-09 8.91588178149527e-10 3.87142228168233e-05 1.73569995395362e-05 0.00366213866348579 0.00016156665300513 0.00354382883589831 5.35432577372208e-09 1.47146536607118e-08 8.06386095003231e-14 0.000399821503572967 0.000326506599459958 0.000995630249934236 4.38756849353533e-09 2.1647510264691e-09 1.94305216780387e-09 0.000259713506598124 2.72269351952444e-05 2.11220867069989e-11 NM_001076257.2 ARRDC3 Bos taurus arrestin domain containing 3 (ARRDC3), mRNA. 0.0 3211 100.00 0.211861379063951 NM_020801.2 ARRDC3 Homo sapiens arrestin domain containing 3 (ARRDC3), mRNA. 0.0 4955 90.09 0.432416339168751 TCONS_00217986_4 sp|Q0VCA2|ARRD3_BOVIN ARRD3_BOVIN Arrestin domain-containing protein 3; 3e-140 402 100.00 0.994845360824742 1 coding 0 0 1 1 0.0219579718467376 0.926869134224482 0.0339963322144394 0.622603090526137 TGGCAGCTTCCAGCCGCCCGTCTTTGTAAGGAGACCACTGAGACTCGCAGAAGCGCGGAGCAGCCAGCAGCCTCTGTGCTGCCCCGACTTTTTAAGAAATCTCAATGAACTATTTGTAAAGAAGCGCTGATCTGCCTGCAAGCTTTTTGCACGGCAAAGACATCGATCAGTGTTAAGTGAGGATCACATCATATATGTGATCTTGACTTTTTTGTCTTACATTATATTTTTTATAGATTTTGTTATAAACATGGTGCTGGGAAAGGTAAAGAGTTTGACAATAAGCTTTGACTGTCTTAATGACAGCAATGTCCCTGTGTATTCTAGTGGGGATACAGTCTCAGGAAGGGTGAATTTAGAAGTTACGGGGGAAATCAGAGTAAAATCTCTTAAAATTCATGCAAGAGGACATGCGAAAGTACGCTGGACCGAATCGAGAAACGCCGGCTCCAATACTGCCTACACACAGAATTACACTGAAGAAGTAGAATATTTCAACCATAAAGACATCTTAATTGGACACGAAAGAGATGAACCAGCTGAAGACAAGAGTTTTATTTTACCCAGAGGAAGTGATGGAAGTTGGAATTAGAATTCAGATCTCTCACACTCCAAAGTTTGTGGCCTTACTTAACTATGTGAGCATCTTTGAAGTTCTGACATCATGAAGAGAGTGTGAAGGTTTATTAATAAATTTTTTGTTTTCTGTTTTAGATGATGATAATTCCGAAGAAGGCTTCAACACTATTCATTCAGGAAGGCATGAATATGCATTCAGCTTCGAGCTTCCACAGACACCACTTGCTACCTCATTCGAAGGCCGACATGGCAGTGTGCGCTATTGGGTGAAAGCCGAATTGCACAGGCCTTGGCTTCTACCAGTAAAATTAAAGAAGGAATTTACAGTCTTTGAGCATATAGATATCAACACTCCTTCATTACTGTCACCCCAAGCAGGCACAAAAGAAAAGACTCTCTATTGCTGGTTCTGTACCTCAGGCCCCATATCCTTAAGTGCCAAGATCGAAAGGAAGGGCTATACGCCAGGTGAATCAATTCAGATATTTGCTGAGATTGAGAACTGCTCTTCCCGAATGGTGGTGCCAAAGGCAGCCATTTACCAAACACAGGCCTTCTATGCCAAAGGGAAAATGAAGGAAGTCAAACAGCTTGTGGCTAACTTGCGTGGGGAATCCTTATCATCTGGAAAGACAGAGACGTGGAATGGCAAGTTGCTGAAAATTCCACCAGTCTCTCCCTCCATCCTTGACTGTAGTATAATCCGTGTGGAATATTCACTAATGGTATATGTGGATATTCCTGGAGCTATGGATTTATTTCTTAATTTGCCACTTGTCATTGGTACCATTCCTCTACATCCATTTGGAAGCAGAACCTCAAGTGTAAGCAGTCAGTGTAGCATGAACATGAACTGGCTTGGTTTATCCCTACCTGAAAGACCTGAAGCACCACCCAGCTATGCAGAAGTGGTAACAGAGGAACAAAGACGGAACAATCTTGCACCAGGGAGTGCTTGTGATGACTTTGAGAGAGCACTTCAAGGGCCACTGTTTGCATATATTCAAGAGTTTCGTTTCTTGCCTCCACCCCTTTATTCAGAGATTGATCCAAATCCTGATCAGCCAGCTGATGATAGACCATCTTGCCCCTCTCGCTGAAGGAATACTTGGTTAAATCAAGTTGATGTGGGTTCTGAACTGTATCTCTTCCCTTCCCGGCTGAGGACAGAGAAGTATCTTGGAAACATGTTTTCAGAGGAAGTGGAATAGCTTTTGCCCAGAAAAATGGCAAACATGAAACAACCAGTGATCACGCTTTAGAAGCCTACAGCAACATTCTAGGACTGCTCCAACATGCTTGAAGATCTAAGCTTTTCTCCTTTAAAACTGGCACATACTAAGAGCAGTCTTCTTAGCCTATGGTCATACGTGTCAAGACACCACGTTGTAAAGAGGGATGATTTCCTTCTTTTGATTTGAAAATTTGCACATGCTCAATGCTTACATTGTGCGGTTCAATGTCACTACAGCTTTTTTTTTTTCCATTTATGCCAGACTCTTGATACTCTTTTAAAACTTGTTTGTGGTGAGCACAACAAGGAACAAAAGAAAGCTTTGAAAGAAACTTTAACATGAAAAAAAATGCACTGACATTTTTTATTTAATATAGCCTGGACTTTACCTGCGTATGCACATGCTCAGAATTGTCCTACTAGGCTGACCATGTATCACCTCTTCAGCTTGGATCCTATTGTGGATTTATTTACAAACATCAAATGCCTTCAAGCCAATCCTTCTTGCTGTATGTTTGCAGCCTACTGTGGTAGATAAGCAACAGATATGTGGGAAAAGAGATAAGAGGAGGAAGCTAATAGACTTTGTCAAGATTGTATACCTTCTTGGTTTCTTTTAAGAATTTGTTGCCTTTCTACTATTACAGCAAAGCAGCATTTTGTTATTGACTGCCTAAAATCACTTAATCTCAGGTGAACGCATCACTTGCCAAACTGTTGGAATGCTATTTGTGTTTTGTTGCACTGTTGAGTTATTTTTTGTTTGTTTGGTTGGCTTTTTGGAGAGGGAAATTTGGAAAAGGGACATACACAAAAGTGATAACCCACCCGCATTCCCTTTTTATCATTACATATAAGAAGAAGCTAGCAGAGCTGAGAATGGAGTCAAGAAAGGCAGTATGGCAGGCACCAGCAAAGAGTTAAGGGCTGTTGCTCTTACAAATTATTGTTATTTTTTATTATTATTTTAAAAGTATGGAAGTTTTCCGGTCACTGGAAAGGAGGAGAAAGTGCATTTATTTTTATACAGAGTTACTTAATTACCTCCAAAACACATATGTTGGAAATCATTTTTGCTGGTGCAGGGTATTTTCATGAGCAGGAATATGGATGTTCAGATTATGAGAGAGCTCATTTTATACATTTCCTGTCCTGCTCAAGCTTCACAGCTTGAAAGCCCCAGTATATTATAAAAGTATAGAATGTAAAAATTAGAAATACTAGAATATTTGTTGGAATCGTTATTTTTTTTGTTTTTGTTTTTTTAAACAAAAGTATGTTTTTCCATAACCTAAAGAAGATTTTGCTAAATGAGAGAAATCATTCACTTTGAGTATAGTTATGAAGAATGATCACATCACTAAATTACAACTTGTGTGAAAGATAATTTACAGTTGGCTCATAAATATACCAGCATTCATTAAGACCCTTAAAACTGCATTTTCCAAGGTACCAAGTGTACTGAATGTCTTTATTTTAGAAGGATTTCAGCTCTGATTTTTTTTTTCTTTTTTTAATGAAAATCAGCATCTCTGATGTTGCAGCATATGTGTGAAATGGGTCTTATATCTATCCTGCCATTTAATCCCACAGTTAATAAAGTGGCTGAAAATAATAGTAACTCTGGCTTGGTGCTTGACCTGGTTAAATACTGTCTTAAAGCTTCATACAAAACAAATAGGCTTTTCCATAAGTGGCCTTTAAGAAAACATGGAAGACAATTCATGTTTGAAAAATGCTGACAGGGTGAAGAAAGCCCATGTAAAAATGAATCGCGTTTTAAGTGATTCGGTTAAAGGGTTTGGGCTCCCGTAGCAAACTAATACTAGATAATAAGGAAATGGGGGTGAATATTTTTTTATTGTTGTTAAATCATTTTGTGAATGTCCCCCTCAAAAGAAGCTAATGGAATATTTGGCATAAAGGGCATTTGGTGGTTTTTGTTGGGGGTGGGGGGGGTGGGTTGTCAGAAAATCCCTTTTCTTTTCTCTCTTCTTATGTCTAACTGACTAGGGAACAATTGTTGATATGCATAGCATTGGAATACTTATCACCATATACTCTTATAAATAACACTTGAGGAAGGAATGACCAATATTCTAATAATTGGCACTGGGTCACAAAATGTGATACAATTTTAAATATATAAAACTTTATCAAATAAAGTTTTATTTCCCCCATTATTCCTTTACTTTCTTACTTAGAGGCATTACTCTTTTCTAAATATTGGTCAATTCTTGATATAAGATATGAGCTTCACAGGTGTATTCCAGTATTCAAAGATAGATTCCTGATTTTTCAATTAGGAAAAGTAAAATCCAAAATGTTAGCAAAACGAAGTGCAATATTAAATGTTTGCTTTATAGATTATATTCTATGGCTGTTTGTAATTCCCTTTTTTTCTTCTCTTTTATTTGGTGCTGAATATGTCCTTGTAGGCTGTTTTAAGAAAACAACATGTGGGAAATGATTTAATTTTTCCTATTGCTCTTCCTTGTGGAAAATAAAAGTGTTTCTTTTTTTTTTTTTTTTCTTTTTTATAAAATTGTTTGGAGATTTATTTGAATTTTAATCATTTCAGTAACTCATCATACATGCAAACACTATTAAGACTACAATTAGGGAGTTCCCTGGTGGTCTAGTGGTTAGAATCAGGCTCTTTCAGTGCCGTGGCGCAGGTTCAACCCTAGTTGAAGAACTGAGACCCTGCAAGCCCCAAAAAGTAAAAAAAAAAACAAAAAAAACTTATTTTAAGCCTTGCTGGATAAGAATTGTTTCTAGATCTCTACTAGTGGAGAGGAATTTTTTAATACAAATTATCATTGTTTTACTTAATTCATTAAGTGATAGATGCTTTTTTTTTTTTTTTTAGTTTAGAAGTTCAGTATGTTTCCATGTTATAATATGAACCAGACTGAACCAGGTATGTTTTCACTTCTCAGGTACTAACTCTGATGTGTCCCAAGTTTCTAGTATTTCAAGAGCACATAAATTTAGAAATTGTATTAATCTAAAAATAATTTTTCTAAATTTTAAAACCTTTTTTTCCTCAAAGAATGTCTGGATTTTATAGTGGTTTGTAACATTAAGTAACATTTGGAATCACACTTAGAAGTTACCTTTTTACAGTGTTTATATACTCATGGATGAGCTGTCAAGTTGTACATTACTATATGATTCTCCCCTATTCTCAAATGTATATACACATGGAAGAAGTGTGCTACAAAGTGACATTAAGAGACAGACATTTGTAATCGATTTTATAGCAATACACTATCCTTGTTAAGTAAAACCAATCTGCACAATATCTTAATACAATAAGTAAAAATGACTAGGAGAGGAATCATGAGAAGGGAACATCTATGTTCTGGGTTCTTTGACTTTAGATAAAACTTAACAAGATGTGTGAATTTTGATTTCTTCATCTACAGTGGAACAGTATGCAGTTATAATACAACTTTAGATAAATGATGCTCTGTCAGTTGCTGAAATGTTGGAAATTAACCTTGTTACTTCTAAATTTGCATTTGAGTACTTCTAGTTCAGTACATGTCTCAAGTTACATAAAAGTGAGTTACTTGGGTCTGATTTTTCCTTGTATCACCTCAGTTCAGTTCAGTTCAGTCGCTCAGTTGTGTCCAACTCTCTGCAACCCCATGGACTACAGCACGCCAGGCCTCCCTTTCCATCACCAACTCCGGAGTTTACTCAAACTCAGATCCATTGAGTTGGTGATAACCATCCAACCATCTCATCCTCTGTCCTCTTCTCCCACCTTCAATCTTTCCCAACATTAGGGTCTTTTCCGATGAGTCAGTTCTTTGCATCAGGTGGCCAAAGTATTAAGAGTTTCAGCTTACTTAGCAAATTCCCTGTGTCGTTAATTTATTGAATAGTCAACATTGGTATACTTATCAGGACTTTTGATTGTAAAAGGGAAAACTCAAGCTTTTTTTTTTACTTAAGTAAAATATGTTAAATAGTAATTCCAGGGATAAACTGTATTAAGCACATTTGGATCCAGAAATCCAAATACTATAAGGATACACTTATCTCCGTTCACTCCCTTTTTTTGTATTAGCATTAGTCTTTCTTATCAGACTCGTTGTCTCATGTTAGATGGGTCAGGAAAGATGACCTCAGCTTTTATAGCTCACAGAAGAAATGTTACCTTAAGCCCCCAAGACATTTGTTAGAGAAAATCCTAGTTGGCCAGTACCTTGGTCGTGTTTCATGCTACTTAGAATGGATTTCCCAATAGAATTTGGTTTCCAGAAGAGAGAAAAGTGAAAGTCGTTCAGTCGTGTCCGACTCTTTGCAACCCCGAAAGACAATACAGTCCATGGAATTCTCCAGGCCAGAATACAGGAGTGAGTAGCCATTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCGAACCCAGGTCTCTACCGCATTGCAGGCGGATTCTTAACCAGCTGAGCCACAGGGGAAGATCACTATATTTTTACTGTTCAAGTGTTGTCCAAACCAGCAGTAATGGCATCATCTGAGAAGAGGACGATATCAAGATCTATCTCAGAATATTGACCCAAAACACCTGTTGACATGATTCCCAGGTGATTTGTAAGTACAACAAAGTTTGAGAAACTGCAGCACACCAAACAAAAGTATAAAATGGAAGCAATAGGCAAATTTGTTCTCATGAATACCAAGGTGTAATTGAGTTGAGGGTTTGGGGCACTTAGTGAAAAATAAACTTGCCATTTCAAATCTCACAGAGTATTCATGGCTTGATATTTTTGAAAGATCTTTGTCACTACTGAGATGCTAGCAGTTACTATAGCTTCAGAACCCTCAGGTCTACAATCAGCAATTTTCAAAACTTCCATGACTGATTTTGCCTTTTCATGATATCAAATCAATACAGAGGGGAAATAACATTTTTCATGTCATGAGAAAAAAAAAAAAAACTATTGATAAATTTGACTTTGACTTTTGAGGATTGTAAGTCTGCAATCGGAGAAGGCAATGACACCCCATTCCAGTACTCTTGCCTGGAAAATCCCATGGGTGGAGGAGCCTGATAGGCTGCAGTCCATGGGGTTGTTAAGAGTCAGACATGACTGAGAGACTTTTCACTTTTTACTTTCCTGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGGCTGGAGAATCCCAGGGACAGGGGATCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTCAGGCACGACTGAATTGACTTAGCAGCAGCAGCAGCAGTCTCTGATCTTAACAATAAAAAAAAACATTTTTAGGAAAACAACCAGAAGATGTTAAGCCCATGCACCACAACTATTGAGCCTGGGTTCTAGAGCCCACAAGCCACAGCTCCTGAAGCCTGCACACTCTAGAGCCCGTGCACTACAACAAGAGAAGCCACTGCAAGAGAGCAGCCACTGCTCGCCACAACTAGAGAAAAGCCCGCACAGCAATGAAGGCCCACTACAGCCAAAATAAATTTTTTAAAAATAAGAAAATGTGTTGCCTAATCAAGAAAATTATTTGAAAAAATAACTGATAAATCATAGCTATCAACGGGAAATGGATTTTTGCTAGTTCTGAAATAAGACAATGAGAACATCATTTTGTATAACTTAGAGGTCTGTTTCCCAGTTACATATGAGTCTTACCAGTGAACAGAAGAATGTGAAAGGTTAAAATATACTCTCCTAATTTTTAACCCTATAAGATGGTGTTAATTTTGCCAACTCATAGATCCAACGGTAATGATACAGATCAGATCAGATCAGTCGCTCAGTCGTGTCCGACTCTTTGCGAAATAGTGAAAGTCAAAGTTATTACTCTGTTACTGTTTTAGATATGAATTTTTGCCAAAAGCTATCTGATCCTTATTGAATAGGAATTCGGATTTATTAAGTCATTTTTGTTAAATGAGTTAATAGCTTACACAATGATATAAATGCAAAGAAACAAATGTTAGAATGAGCCAGTTCTGCTCTTTTTTTTTTTTTAGAAAATCAGCATCTCCATCTTCTAGTGCAAGGCCCACTTTGATAATCTAGACATTTTGACAGGTCTGAATCCCACAAAGTGTACCCAAGATGTTTAGACTAATTAGGAAAATAATAGGAAACTCAAATTCAGCACGTGGATCATGCAAACAAACAGTATGCTGGCAGCCTATAAAAGCATACCCAGAACCTACAACAATAAAATCACACAGGCTGTTCTCCAAATCGTCAATTCCAAAATTACAATAGCAGCGTTGGTGGTGTAGTGGTACACATAGCTGCCTTCCAAAATTACGAAAAGCAGAGAAGAAAATGTTCCCTCCCCTTCACTGTTTTTCCTTCCCTTTGGAAAAACCAATTCTACAAAACCCTAGAGAAGAAATAGCCATGGGAGTACATGCTGTGTAGGGAAGCCGTAGACAAATGCCTCAGACTGCTGAGCTTTTATGAGTCCTTGGGCAGACTGATCCGGAAAAGCCAAATAAATTGCCGTGTTACACTGCCAAGTGTATTCATTTCCTATAGCTGCCTTAACAAAGTACCACAAACCAGGAGAC EMBV3_41159 GCTTGTGCAGTACTTGACCATGGAGACCTGTGAGGATGGGGACGACCTTGTCTTCTTCTA Gene GeneID:100139295|MSH5:XM_002697366:363_cdna Constitutive 0 NULL GeneID:100139295 23 GENE MSH5 NULL mutS homolog 5 (E. coli) EMBV3_41061 GGGAGATACGCTGGAAGACATTTACAACCAAGTGAAGCAGATCATAGAAGAACAGTCTGG Gene GeneID:785291|DLG1:XM_002684855:228_cdna Constitutive 1 NULL GeneID:785291 1 GENE DLG1 NULL discs, large homolog 1 (Drosophila) EMBV3_11119 AAATCGAGTCCTCAAGGAGTACAAAGATGTGGGCCTGTGGCAAAAGAACTGAGTGGCTTG Variant GeneID:504519|CAP1:NM_001035010:59_cdna 557^662 2 EMBV3_14575 GeneID:504519 3 GENE CAP1 MGC127425 CAP, adenylate cyclase-associated protein 1 (yeast) EMBV3_20217 CAGTGCCTGAAATTCCTCCTCTTCTTGGGATGTTACTGGCTGGTTTTGCTGTTAGGAATG Gene GeneID:509608|NHEDC1:NM_001077892:8_cdna Constitutive 1 NULL GeneID:509608 6 GENE NHEDC1 MGC152004 Na+/H+ exchanger domain containing 1 EMBV3_31387 CCAAGTTTCTTTCCCAGGACCAAATTAATGACAGAAATGGAGAGCTGGATTTCTCTACTT Variant GeneID:539277|CALML4:NM_001034671:225_cdna 81^221 2 EMBV3_03666 GeneID:539277 10 GENE CALML4 MGC127323 calmodulin-like 4 EMBV3_30769 CTTTTCCGGGAGGCTTATGCTGCCATCGAGTTCTGTGGCACTTGCCCTGGGTGCCCTAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06893 CCTGGACTACATTGTGCCCTGCATGCGGTACTATGGCATCTGCGTCAAGGACAGCTTTCT Gene BVT0102_304998 + 0 NULL GK000018.2:50323664-50331657 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083814 TCONS_00083812 TCONS_00083813 TCONS_00083816 1 XLOC_051352 Coding TCONS_00083816 XLOC_051352 Coding Coding EGLN2 18:50327157-50334397 j TSS62886 1200 1 TCONS_00083816_2 182 4 0.834783809918497 0.00313051727683603 6.31698777713353e-32 0.000765208604081996 0.000170018438501849 0.000307325557274528 0.000250006975060789 0.00042677610401031 0.00181685612824733 6.51168545883579e-07 0.000764790736100461 0.000213002724124974 1.56486407810088e-05 2.82090978650207e-05 2.34302507065419e-44 5.75885906591048e-78 0.00712903403888551 5.8209548196786e-27 9.11408895007917e-05 0.000123405756422762 0.00175048736126699 4.75263928962355e-05 0.000391459086146603 0.0043126258939337 0.00042944558186419 0.000726229111740369 0.000972859748276427 9.48621315591366e-05 0.00103978313845151 0.000446245209846871 0.000649695899328074 XM_005218987.1 EGLN2 PREDICTED: Bos taurus egl nine homolog 2 (C. elegans) (EGLN2), 0.0 1516 100.00 0.699166666666667 NM_080732.3 EGLN2 Homo sapiens egl-9 family hypoxia-inducible factor 2 (EGLN2), 0.0 1020 86.89 0.7025 TCONS_00083816_2 sp|Q96KS0|EGLN2_HUMAN EGLN2_HUMAN Egl nine homolog 2; 6e-120 350 80.63 0.994505494505495 1 coding 0 0 0 0 0.0417784664139013 0.79982116965767 -0.153727356379858 0.175796716618219 GCGCCGGGCTGAGGGAGGAGGTGCTGCCCGCGGCGCCCGAGCGCCTGGCCCTGGACTACATTGTGCCCTGCATGCGGTACTATGGCATCTGCGTCAAGGACAGCTTTCTGGGGGCGGCCCTGGGTGGCCAAGTGCTGGCGGAGGTAGAGGCCCTGAAGCGGGGCGGGCGCCTGCGAGACGGGCAGCTTGTGAGCCAGCGGGCTATCCCGCCACGCAGCATCCGTGGGGACCAGATTGCCTGGGTGGAAGGCCATGAGCCAGGCTGTCAAAGCATCGGTGCCCTCATGGCCCATGTGGATGCTGTCATCCGCCATTGTGCTGGGAGGCTGGGCAGCTACGTCATCAATGGGCGCACCAAGGTGCATGGCGGCCTGCTGCAGATATTCCCTGAGGGCCGGCCCGTGGTAGCCAACATTGAGCCCCTCTTCGACCGGCTGCTCATTTTCTGGTCTGATCGGCGGAACCCCCATGAGGTGAAACCAGCCTATGCCACCAGGTACGCCATCACTGTCTGGTATTTTGATGCCAAGGAGCGAGCAGCAGCCAAAGACAAGTATCAGCTAGCATCAGGACAGAAAGGGGTCCAAGTGCCCGTGTCACAGCCGACTACGCCCACCTAGTGGCCAGTCCCAGAGCTGCATGGACAGACAGCCTGCCCTGGCTTCAGGAGAGCCCTGGGCCCCGGTGCTGCCAGTCTCGGTGCCTGCTCCTTCCCCGCCACCACCACTGCTTCTGACTTTGCCTCCGTCCTGCCTCGTGTGGAGGGCTCTGTCCATTGCTGAAGACCAAGGAGGAGGAGAGACCTCTACTGCCCTGGGATGGGGGCGGGGGTTGTGACCCAGACAGGAGCCAGTGTTGGGGCCTTCCGTTACTGGAGCTGGGGGCCTGTGTCCTGCCCTGTCTGGTCATGCCCCTCTCAGGTTTGGAGAGCTGGAAGGAGGCATCGCCACCTCCCGCCAGGACGCAGGATCTGGGGTTGGGGTGAGTCATAGCCTCTTGCTGGCAAAGGTTTGTGGGGGAATATCCCCAAGTCTCCCACTCCTCCAGCCTGGAATGTGAAGTGACTCCCCAACCCCTTTCACCATGGCACCTTTTGGACTAGGCTGCCACTGCTTGGGCAGGATAAAGGTGCTGGGAGGAGCATGGGTGTGCAAGTCCTATCAGCCAAGAAATAAAAGTTTACCTCAGAGCTGCACACAT EMBV3_29573 CTGCTTTTTCCAAGGGTTTGTCACTGAAGAAGGAGCTGAGAGAGGATGTGCCTGAAGGTG Gene BVT0102_440690 + 0 NULL GK000019.2:47539646-47556654 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32692 CGCAGATACGAATACGACCACTGGGATGCGGGGCTCGGCTCGTTATGACTTCTCCCACGA Variant GeneID:535305|ALKBH7:NM_001046402:72_cdna 222^520 4 EMBV3_41162 GeneID:535305 7 GENE ALKBH7 MGC137333 alkB, alkylation repair homolog 7 (E. coli) EMBV3_09420 TTCCGTGAGCAGAGCTTGCGGCTCTTTTATATGAGGGTCTCCCAGAGGTCTCATTCAGAA Gene GeneID:615089|PGPEP1:NM_001109983:116_cdna Constitutive 3 NULL GeneID:615089 7 GENE PGPEP1 NULL pyroglutamyl-peptidase I EMBV3_37351 TACTAAAAATGGGTCCAGTAGACAAGCGGAAGGGTTTATTTGCACGGCGACGACAGCTGC Gene GeneID:100138102|PDPK1:XM_002697862:368_cdna Constitutive 1 NULL GeneID:100138102 25 GENE PDPK1 NULL 3-phosphoinositide dependent protein kinase-1 EMBV3_39400 GGGCCCAGTTACTCCTTACGTTCCACAACTATGATGATTCGACCTTTGGACTTTTGAAGG Gene GeneID:282140|ANGPT1:NM_001076797:11_cdna Constitutive 0 NULL GeneID:282140 14 GENE ANGPT1 MGC143440 angiopoietin 1 EMBV3_09366 ATTTATTTTACATATCTGAGCTTACTCTATATTGACAATTATTTATCATGCTTTTTTCAT Gene BVT0102_374561 + 0 NULL GK000017.2:45163448-45191288 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23317 GAGGTAAAAGTGCGGCTTGGCCCAGTTTCTTCTGCCCTTCTCTAGAACGGAGCCTATCTA Gene BVV0102_153195 + 0 NULL GK000023.2:27035590-27038199 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134494 TCONS_00132826 TCONS_00132827 TCONS_00134495 2 XLOC_081427 XLOC_080890 Coding TCONS_00134494 XLOC_081427 Coding Coding PPT2 23:27028161-27036747 j TSS100249 1928 1 TCONS_00134494_3 311 9 0.776470588235294 2.08734208373513e-07 6.12707871749907e-44 2.21127717780156e-09 0.000104507201715355 8.52007372157326e-09 2.33279554016702e-24 1.14944438566467e-16 1.85376745736656e-87 5.95091300876995e-20 2.14548817611368e-05 0.00015810962454514 1.78336699661938e-45 1.69367133150269e-63 2.96759911911046e-05 4.10835645319064e-19 0.0013212520757035 5.94271648784908e-05 0.000743752174807422 3.84150547162421e-38 1.51615291067685e-27 2.57995022605235e-17 5.53890004820997e-37 0.000641360149626688 0.000264943142174365 3.68166671938914e-29 0.000148084454855661 1.31206096838254e-07 0.000238012803723773 1.61826247538823e-05 0.000248751973649883 XM_005223656.1 PPT2 PREDICTED: Bos taurus palmitoyl-protein thioesterase 2 (PPT2), 0.0 3472 100.00 0.99792531120332 NM_138717.2 PPT2 Homo sapiens palmitoyl-protein thioesterase 2 (PPT2), transcript 0.0 2044 84.86 0.922717842323652 TCONS_00134494_3 sp|Q1JQA0|PPT2_BOVIN PPT2_BOVIN Lysosomal thioesterase PPT2; 0.0 630 100.00 0.977491961414791 2 coding 0 0 0 0 0.231315714260184 0.384781959022021 0.0332216927934001 0.545485385664492 CCGATAGGGATCAGAGAGAGAGGTGGGAGACGCCTGGAGTTAGAAGTCCAGCCCCGGTGGGAAGGTCTGAGTAAGGAGCCGCCCACAAGGAGCTCCAGGATCAGGGCGGGGGTGTGGGGTCGCTCAGGTAATGAGACTTGTCAGAAACTAGGCGGAGCGTGAGTCAGCGCTGCCCAAGGGGCTCTCCTCCCCTTGGGGGGTGGGTCGTAGATAGGCTCCGTTCTAGAGAAGGGCAGAAGAAACTGGGCCAAGCCGCACTTTTACCTCGAGGGGCCTCGAGGACTCTCCGCGTCTCTGGAGACAAGGGCACTACAAGCACTTCAAGATGAAGAGTTGCGGAAGCATGCTGGGGCTCCCGGAACGGCGGCTCCCTTCGGCGGAGTTCCTGCTCCTGTTGCCATTCCTGCTGCTGCTGCTGCTGCTGCTGCCCGCCGCCCCCGCGCCCCATCGGGCTGCCTACAAGCCGGTCATAGTGGTGCACGGGCTCTTTGACAGTTCGTACAGCTTCCGCCACCTGCTGGAATACATCAATGAGACACACCCTGGGACTGCGGTGACAGTGCTCGATCTCTTCGATGGGAGAGAGAGTTTGCGACCCCTGTGGGAACAGGTGCAAGGGTTCCGAGAGGCTGTGGCCCCCATCATGGCAAAGGCTCTTCAAGGGGTGCACCTCATCTGCTACTCCCAGGGGGGCCTGGTGTGCCGGGCACTCCTGTCTGTGATGGATGAACACAATGTGGATTCTTTCATCTCTCTCTCCTCTCCACAGATGGGACAGTATGGAGACACAAACTATTTGAAGTGGCTGTTCCCCACCTCCATGAGGTCTAACCTCTACCGGATCTGCTACAGCCCGTGGGGCCAGGAATTCTCCATCTGCAACTACTGGCATGACCCTCACCATGATGACTTGTACCTCAATGCCAGCAGCTTCCTGGCCCTGATCAATGGGGAAAGAGACCATCCCAATGCCACTGCTTGGCGGAAGAACTTTCTGCGTTTGGGCCGCCTGGTGCTGATTGGGGGCCCTGATGATGGTGTCATTACTCCCTGGCAGTCCAGCTTCTTTGGTTTCTATGATGCAAATGAGACAGTCTTGGAGATGGAGAAGCAACTGGTTTATCTGCGGGACTCTTTTGGGTTGAAGACTCTGCTTGCCCGGGGGGCCATAGTGAGGTGTCCAATGGCTGGGATCTCCCACACGGCCTGGCACTCCAACCGTACCCTTTATGAGACCTGCATTGAACCTTGGCTCTCCTGAGGGACCCCTCAGGAACTCCCCGCCCAGAGACTGAGTGGAGCCTTGGATGTCAGGCCTTGGTGTGCCTGTGACCACCTCACTGGTCCCACACTGCCCCCACCAACCAGGGCTCCAGGACCCCTGCTCTGTGAATGACACATCCTGGTCTCCTCCATCTCGTGTCCTCCCTTTTGGGGGTTGCTCCACGCTCTCCCATGCCCCCCAAGGCCAAGGCTGGGAAGTGGGAAACAAGATTAACTTGTGGCTGCTCCTGTTGCTGCTGCTCCTCTGTCTCTGGCTCTACACAAGGAGAACCCAGCCCCTGCCCACCACAGGGTCTCCTTCCAAGCCACTCAGGACATTTTTAGCTTGTTTTTCCCACGTTCCCTTTTCCTCTGAACTCCCCTGTTGTGAGCCCTCCCAACCCCTCAGGAAGGACCACCTATGAGAGTGGGGTTCTGAGGTTCCACTATGGGGACAGTTCGTTCTTGAAGTGTCAGTGTTGGGGAATATCTGTGGCCTGTGAGGCCCATCTCAGGTTTGGGGATCCCCCAGTCCCTATGTTCAGTATTGGGGTGCCCTCTGGGAGCCTAGTTTCTTTGAGGCTCCAGCCCCTCTTTTAGCTACCCTGGAATGGGTGTGTTACTACCCCTGTATTTATGAAAATAAAGTTGCATTTACTCAGTGT EMBV3_14737 AGATCTTCACCTACGGCAAGCAACCCTGGTACCAGCTCTCCAACACCGAGGCGATCGAGT Gene GeneID:353111|NTRK1:XM_002685965:263_cdna Constitutive 0 NULL GeneID:353111 3 GENE NTRK1 TRKA neurotrophic tyrosine kinase, receptor, type 1 EMBV3_29025 GCAGACCCAGATTACGGTTCCAAAGCCAGAAAGTACATGTTTCCTGTTGGGAGGACTTGG Gene GeneID:613629|SIRT1:XM_002698855:429_cdna UTR3_Alt 2 NULL GeneID:613629 28 GENE SIRT1 NULL sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) EMBV3_00053 AGAACTTTTACCGGTAGCTCACTGGGAACCTGTGGGACTGGCATGTAAGTCTTCATCCTG Gene BVT0102_111066 + 0 NULL GK000001.2:58575454-58585562 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01854 GACCTGATCTTAATGAATTGGAGATACGGCCCAAACAGAGGCAGCTGGAGGCGGAACTTC Gene GeneID:509044|LOC509044:XM_002699888:140_cdna Constitutive 0 NULL GeneID:509044 X GENE LOC509044 NULL similar to E2F6 splice EMBV3_36625 GTCAGGAGACCTGAGACTGGTTCCTTGCTGCCACTTCTATCGATCTGTCCAGCTTCAATA Gene GeneID:514665|SYPL2:NM_001075676:104_cdna Constitutive 2 NULL GeneID:514665 3 GENE SYPL2 MGC143415 synaptophysin-like 2 EMBV3_11551 TGAGGTCAGGCTCGCTTCAGGGCACCTTATGTAGCGTTTGGAAGAAACATTTTTGAAGCT Gene GeneID:514335|ES1:NM_001034463:48_cdna Constitutive 1 NULL GeneID:514335 1 GENE ES1 MGC127117 es1 protein EMBV3_26679 GTTCGTTTTCCTGTAGATCAAGGCAAAACTATCATTGGCTCTCTTACACTCCTGGTAAGA Gene GeneID:534616|BCHE:NM_001076906:146_cdna Constitutive 0 NULL GeneID:534616 1 GENE BCHE MGC142591 butyrylcholinesterase EMBV3_38019 CAGTGTTGAGAGGCGGAGACTTGGGCAATTGCTGGACGCTGCCCCGGGCATTGCACTTGT Gene GeneID:791066|MIR25:NR_030941:364_cdna Constitutive 0 NULL GeneID:791066 25 GENE MIR25 MIRN25 bta-mir-25 microRNA mir-25 EMBV3_34981 TTATTAGAGTGGAGTCGAGCGGCAGGCAGATTTGGGTTCCAGCAGAGCCGAAGTTTGAGA Gene BVV0102_094967 + 0 NULL GK000013.2:58260727-58398930 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16898 GGACTGCCACGAATGAGGGCATCCTGGTAAATCTCCAGTGTTTCGTGTTGGAAGCCAAGA Gene BVV0101_028472 + 0 NULL GK000022.2:49607503-49629777 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29910 TTAGCAGGCCTTATAGCTTCCTTCGAGACTGCTTGGAAAAGGGTGCAGAAGAGTTTGGCC Gene GeneID:504230|RAMP2:NM_001098860:64_cdna Constitutive 0 NULL GeneID:504230 19 GENE RAMP2 MGC159420 receptor (G protein-coupled) activity modifying protein 2 EMBV3_18051 GGCACTTCTAAGCCGTAAAAGTTGCTGAAAAGAGACCTTTAGAGTCTTGTGGTCCCAAGC Gene GeneID:615287|YIPF4:XM_002691219:47_cdna UTR3_Alt 2 NULL GeneID:615287 11 GENE YIPF4 NULL Yip1 domain family, member 4 EMBV3_41802 GTTTTGGAAATGTACCTCCAGAAATGAAGCCAGTTCGACATTTAGCCTGGGTTGCCAGTG Gene GeneID:781644|LXN:NM_001080340:179_cdna Constitutive 0 NULL GeneID:781644 1 GENE LXN MGC142553 latexin EMBV3_18158 GTACCTTTTCCCCCAGACCCAAGAAGGAAATATCATGGAGAGTTTCAGTGTTTAGGAAGC Gene GeneID:539023|TRIM36:XM_002690428:146_cdna UTR3_Alt 2 NULL GeneID:539023 10 GENE TRIM36 NULL tripartite motif-containing 36 EMBV3_34005 CAGGATTACAGTGATCAGCTAGGTCTAGAGGAGTCTTTCTCTTAGGAATCTGAGGTAGGA Gene BVV0102_332020 + 0 NULL GK000003.2:4527428-5352178 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15993 GGTGTAGCCTTAGGATAGATGCTGACTAGTGGAAACCTCCTGAACTGTTACCGCTTTGGG Gene BVV0102_043232 - 1 EMBV3_42304 GK000024.2:33047757-33072796 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140033 1 XLOC_085046 NonCoding TCONS_00140033 XLOC_085046 NonCoding NonCoding - 24:33064628-33066005 - TSS104620 1377 1 TCONS_00140033_2 155 0.129992737835875 1 0 0.0002528728030027 5.83787792305254e-05 0.000739245333738569 0.000277408314713358 1.79254459951384e-11 0 0.00016424356369678 0.000141747691173656 0.000137518704647791 0.000131472669275661 0 0 0 0 0 0 0 0 0.000213514150633334 8.70780742533358e-14 2.46834349034757e-06 0 0 0 4.34539132545023e-05 2.39176966428628e-25 0.000873700705280988 6.97544221359229e-06 0 0 XM_613406.7 ALG11 PREDICTED: Bos taurus ALG11, alpha-1,2-mannosyltransferase (ALG11), 2e-63 248 90.96 0.127814088598402 0 noncoding 0 0 0 0 -0.136833654649853 0.297328406040044 -0.0174820018765925 0.703267915194889 TTGTTATAGAGCGAATACTTTTATTAAACAGGACATCACATTCCATTCCATTTTAGATCTTCCTAGAAGATGATCCTGTTGCTAGCATCCAAACCAGTTATCTCTCTGACAGAAAATCTGCATTAAATAAGGGTAGGTGTAGCCTTAGGATAGATGCTGACTAGTGGAAACCTCCTGAACTGTTACCGCTTTGGGAGGAACCAGCTGAGTAAAACCAGCTGCTTCTGACGTTGTGTCTCCATGGTTGCATAGTTACCTAGCACAGGTTGCAGTTGAAGCTTTTGAGATATCACTCCTAGGGTGCTAACCATTGACAGCACCTTTTCATGTCTAGTCTCTTCTCACCTTTGACCCTTACCCCAGGCTGACCCTCTGGTGCAGGGGAGGGGAGGCTGACCCCTAGCCTCCCTCTGACCTTGACTGTGTCTTGCTGCCTGCTGTGGGTATTCTTTGCAAAGTAGTTGCCAGTTGCTACAGCTGTTGCACATTAAAGGCTCCGCTTTTAATTCAGAGACTTGAAAGGCTGTAACCAGCGAACTCATAGGATCTACCACTGCCGCATCACCTGAGATGTTGGTTGTGGGATGGAGTCAATTGAGGAGCGGGCACCTGCGCAGCCAACCTCCCTGGTTTCCCACTCCTGAGCCTGCTGTCCCACCGGTGACCATAGGGGGCGCTGTGCGGCGTTATTAACCACGCCTCCCCGACGCCTCCAGATTTCACCAGGAGTCGTGGAGCAAGCAAGGTGTATGCTGGCTGGTGCCTGGTCCGAGCTTGCCTGTCAATCGTTTTGGCCGCAAGAGGTTAGTCTTTGGTGAGGGAGGGACCACCGGAAGGAGCTGCAGTGGGGGCTGCAGTAGCTGAGGATCCAAATCCAGGGCCAGGTGGGCCAGGGCGGTCCCTTTGCCGCGATGATCGAAACTGAAGGATCCATAAGGCGGAGAGTCCTTCAAGCATCTTCTCCCGCGCGTGGGAGCGTTCTCATTTTTTTTGTTGTTCAGTCGCTCAGTCGTGTCCGATTCTTTGCGACCCCATGGACTGCAGCACTCCAGGCTTCCCTGTCCATCACCAACTCCCAGAGCCTGCTCAAACTCATGTCCATCCAGTCGGTGATACCATCTAACCATCTCATCCTCTGTCGTCCCCTTCTCTTCCTGCCTTCAATCTTTCCCTACTGTTTATATTCTGTTGTTGAGTTCTCACTAATATCTCAACCACTAATGCGGGTCCCTTTTGGTTTCGTGCCCCCTACAGACGTAGGAGATGTAGAGGGAAGTGTATGTTGTGAGCTGAGGGGAAGGGCTGGAGGCCTGGCCCTGGTTCTGATTGGAGCTGTCGTCTTTGGCAGGTTTTCTCACCCCGGGGCGGGAAAGGGGG TCONS_00140034 TCONS_00140035 s 3' 5264 TCONS_00140034 TCONS_00140035 s 3' 5264 EMBV3_02985 TTTAGACTAGAATTATCCCAAGAGAGCGGGTCAGAGGCCAGGAGAGAGAGTCCACAGGAT Gene GeneID:505843|LOC505843:XR_082690:124_cdna Constitutive 0 NULL GeneID:505843 3 GENE LOC505843 MGC152327 hypothetical protein LOC505843 EMBV3_42554 TGGTGAAAGCCAAGAATCTCATCTGGGCCAACGACAAGACCACGGCAGATCCCTTTGTCA Gene GeneID:536820|SYT12:XM_002699361:266_cdna Constitutive 0 NULL GeneID:536820 29 GENE SYT12 NULL synaptotagmin XII EMBV3_37776 CCTCCCTTCCGGTTAGTGTCCACCATGCATCTCACTCTGGGTGTCTTGGTCTTTTATTTT Gene GeneID:507342|FSCN1:NM_001035045:110_cdna Constitutive 0 NULL GeneID:507342 25 GENE FSCN1 MGC128189 fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) EMBV3_17257 AGAGGGCTCTACTGAACGAGGAAGATTGTGGAGGAACGCAGTACTCGGCACTGATTGGAT Gene BVT0102_148137 + 0 NULL GK000024.2:35602347-35630927 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140125 TCONS_00140121 TCONS_00140123 TCONS_00140120 TCONS_00140122 1 XLOC_085065 Coding TCONS_00140125 XLOC_085065 Coding Coding THOC1 24:35574926-35605311 j TSS104665 2550 1 TCONS_00140125_5 314 0.165490196078431 12 0.916469194312796 0.00148328502099329 0.000522951936012536 0.000524424467056932 0.000502298790575582 0.000505944174401126 0.000147095030767081 0.000525304116300532 0.000120033459000853 0.00029177786378878 7.56843634434392e-56 3.13865220808564e-84 5.86677727009565e-95 3.84037266926621e-05 6.75439732185116e-09 0.000429002235524068 1.20773766063655e-259 0 2.28296614483752e-80 0.00024673804477494 0.000441810738358102 0.000545039273010633 0 4.87703861458692e-06 1.61954718706761e-319 0.000322276998652181 0.000425709297785007 0.000828348346612116 8.96604029239377e-207 2.86672088201293e-46 3.24073507571095e-120 NM_001205480.1 THOC1 Bos taurus THO complex 1 (THOC1), mRNA. 0.0 1696 100.00 0.368235294117647 NM_005131.2 THOC1 Homo sapiens THO complex 1 (THOC1), mRNA. 0.0 1487 94.46 0.374901960784314 TCONS_00140125_5 sp|Q96FV9|THOC1_HUMAN THOC1_HUMAN THO complex subunit 1; 0.0 628 98.04 0.971337579617834 1 noncoding 1 0 1 1 -0.100479805913716 0.646469921479636 0.0441868434597288 0.356204837288642 GAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAGATCAGTCCTGGGTCTTCATTGGAAGGACCGATACTGAAGCTGAAACTCCAATACTTTGGCCACCTCATGTGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGATGGCTGAATGGCATCACCAACTCCATGGACATGAATTTGGGTAAACTCCGGGAGTTGGTGAGGAGAAGGGGACGACAGAGATAGCTGAATGGCATCACCAACTCCATGGACATGAGTTTGGGTAAACTCCAGGAGTTGGTGATGGACAGCGGGGCCTGGCGTGCTGGGATTCGTGGGGTCGCAAAGAGTTGGACACGACTGAGCGACTGAACTGAACTGAACAATCATCCATAATACGATAACAATCCGATTACATCAGTTACCTATTAAGTCAGTTAATACCAGTTGATTTGGGCAATTTGGCAACGTACGTTGTACAATCAAACCTGAATGATTTTATTCTGAAAAAACCTGCAACGCTCCAGGTAGCCATCACTGTTCACAATTCCCACTTAGGGACAAGATAACGCAAAGTTATATTTTTGTTAGCGTCCCGTACTCTCGCTGGATATCCACGAAGGGAACCAGGTAAAGCGCGCCAGGCTTTCATTTAGGAACACGCGCAGGTGGGTAAGAGCTGGTAGCAGGTGTTTGGGTCAGTGCTTCTTTCCCCACCGCATAATTCCAACGGAAAGACGACTGCCCCTTGGCTTCTTATTGGCCAAGTGAGCGGAGACGAGGGAGGAACCGGGCAGAAGACTAGGTCTTGCAACAGGTGCCTTAACCCTGGGACTTGGCGCCACTGGCTATCCAATCAGTGCCGAGTACTGCGTTCCTCCACAATCTTCCTCGTTCAGTAGAGCCCTCTATCTGCCAGCAAAATGAACGAATCCCCACACATTACATTGCTACACAAGCCACGCTTGCATTCATGACTTCACGCTCCTCAACAGCTCAGGGATACAAGCGTTATTTTTATTTCTCAGAAAGTGGAACTGCACCTGAGCTACAGGGCCCGTGACCTTCGAGGCAGAGGCGCGAATCCGGAGGTGGGACCACTCGTTCGGGAAGAAGGACTTTGAACCGACGGCCACTGCCGTCACCTCCCCAGCCCGGAGCTCCCGGATAAGCCGCCTGACTTGGATTCTCAGACGGCTACCACCTTCCCTTGCGGCCCATCGAGCCGTAACCAGCCGCCATTCACCCGACTTCCCAAACCAGGAGAACGCCGGCCAACAGCCCGAGCGTCCCGGCTTGTAACCCGCAGCGTGTACAGGGCGAGGCCGCGCATCTGCAGTCACCCATGGGTTGTTACCCACGAACCCGGATCGGGCGTTGAGTGGCTAACCCTGGCTCCCAAACGCCCTCCCGACCTCCGTCACAGGGAAGCTCCCTAACACCACCGGACCCGCCCCTGCGCCCACAAGCCACTCTAGCCGCGCACGGAGCCGGCACTCTCGTTGCTCCCGCCCTGACGTCATCAGCGGGCGCCGCGACGAAGTGGCGGGCACGCTCAGCCAAGAAGATGTCTCCGACGCCGCCGCTCTTCAGTTTGCCCGAAGCGCGGACGCGGTTTACTAAATCTACGAGAGAGGCCCTGAACAGCAAAAATATCAAGCCCTTGTTGAATACCTTTAGCCAGTTACCTGGCAGTGAAAATGAAAAAAAATGTACCCTTGACCAGGCTTTTAGAGGTGTTCTAGAAGAAGAAATTATAAATCATTCATCATGTGAAAACGTTTTAGCTATTATTTCTCTTGCTATTGGGGGAGTAACTGAAGGTATTTGTACGGCATCTACACCTTTTGTGTTGTTGGGAGATGTTTTGGACTGTCTTCCTTTGGATCAGTGTGACACAATATTCACTTTTGTGGAAAGAAATGTTGCTACTTGGAAATCAAATACATTCTATTCTGCTGGGAAGAATTATTTACTACGTATGTGCAATGATCTCCTACGAAGATTATCAAAATCCCAGAATACAGTCTTCTGTGGACGAATTCAACTCTTTTTGGCCAGGCTTTTCCCTTTATCTGAGAAATCAGGTCTTAACTTGCAGAGTCAGTTTAATCTGGAAAATGTCACTGTTTTCAATACCAATGAGCAGGAAAGCACATTGGGTCAGAAGCACACAGAGGACAGAGAAGAAGGAATGGATGTAGAAGAAGGTGAAATGGGAGATGATGAAGCTCCAACAACTTGCTCCATTCCAATTGATTACAACCTGTACCGAAAATTTTGGTCACTTCAGGATTACTTTAGAAACCCTGTGCAATGCTATGAGAAAATCTCATGGAAAACTTTTCTCAAGTATTCTGAAGAAGTCCTAGCTGTTTTTAAGAGTTATAAATTAGATGATACTCAGGCCTCAAGGAAAAAGATGGAAGAATTGAAAACAGGAGGAGAGCATGTATATTTTGCAAAATTTTTAACAAGTGAAAAGGGACTGATCAGATGCCTTCATCTC EMBV3_11705 GCCCTGTAGATGCTTTTCCCCACGTATCTGGCAGTCTTTGATGTGGTTTTTATCGTGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17937 CACACAATTAGTGTTCACAGAACTACAACTGTCTATATGGTTCCCTTTCCCCCACTCCTC Gene BVV0102_060678 - 1 EMBV3_05820 GK000003.2:42893790-42934886 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169681 TCONS_00173137 TCONS_00173140 TCONS_00173136 TCONS_00173139 TCONS_00173141 TCONS_00173138 TCONS_00173135 2 XLOC_103419 XLOC_104305 Coding TCONS_00169681 XLOC_103419 NonCoding NonCoding - 3:42917402-42917837 - TSS126974 435 1 TCONS_00169681_1 36 1 0 0 0 0 0 0 0 0 0 0 2.82629673736537e-88 1.20720387602959e-13 0.000105998143884242 3.82133702352587e-05 0 0 0.000299035694190703 0.0133325416800877 0.00444690331750412 0 0 0 0.00183440863102692 0.000266506300056057 0.001608465025146 0 0 0 0.000188211090285985 0.00028161645146646 0.000131469759056573 XM_003585862.2 CDC14A PREDICTED: Bos taurus cell division cycle 14A (CDC14A), transcript 0.0 785 100.00 0.997701149425287 NM_003672.3 CDC14A Homo sapiens cell division cycle 14A (CDC14A), transcript variant 9e-143 509 86.39 0.997701149425287 0 noncoding 1 1 1 1 -0.0574665626632528 0.640528677352288 -0.0389644358481386 0.658454507690484 AGCAGTGTATTCTTCTACACCTTAAAATAGAACAAAATGTCTTTTCAAAGGTAAACTATTCATAACAAAATACATGTCAATCTTTATTATTGGAGTAGAATCACTTTGCTATATACTTTCTATATTATACACATATTCTTCTTGATTTGTCTATGTATGTACATGTGTATAAATAATTTTAAGACATACCCATGTAGATACATATGACTAATATACACATATAATTATGGAAAATTTACAGTAGTCAATTTTACAATCATTTAGTAGCTGCACACAATTAGTGTTCACAGAACTACAACTGTCTATATGGTTCCCTTTCCCCCACTCCTCAAATATCATCTGAATTACTTTTCACCGATAATTTTGAAAAAATACTATCATTTTCCTATACAATTAACTGATCATTTTTTACAATAACTCATTATAAAATATTTT TCONS_00173141 r 5' 0 TCONS_00173141 r 5' 0 EMBV3_41798 GCACAGGGGGTTCCTGCTGCTCCCTCCCTTAATTCCAAGATCAGTTACCATTAAGTATCC Gene GeneID:100125312|UBAC2:NM_001103344:2_cdna Constitutive 5 NULL GeneID:100125312 12 GENE UBAC2 MGC142780 UBA domain containing 2 EMBV3_25096 TTGATCATTTGCAACGAGACAACGATTATGGCTATGTGGCTTGCCAAACATCTGAGCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12142 TTTCTTGAGTCTAAATGCGGAACTCTGGCAACCCATTTCTAACAGGTCCAGGATGGATTG Gene BVV0102_008128 - 1 EMBV3_08449 GK000009.2:51164679-51485364 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235522 TCONS_00235531 TCONS_00235533 TCONS_00235523 TCONS_00235529 TCONS_00235532 TCONS_00235525 TCONS_00235524 TCONS_00235530 TCONS_00235528 1 XLOC_144242 Coding TCONS_00235533 XLOC_144242 Coding Coding C9H6orf168 9:51139495-51172693 j TSS176512 8969 1 TCONS_00235533_1 129 0.0789385661723715 3 0.72991535379703 1.26531040656815e-07 2.35639338717248e-07 0.000143153522121987 0.000159631003544807 0.000393528542728066 2.65740773470543e-05 3.02189804700131e-13 0.00010501634742636 2.38662548907788e-24 2.34552554813405e-08 1.96869977035875e-13 9.69717592461596e-13 3.27319764741048e-11 1.33073409899542e-06 0.000118163345043829 4.93620809485459e-09 0.00244305574229794 0.00123933252066371 5.0880331718535e-05 8.49378773208045e-05 2.27354881707073e-12 2.41953984008636e-10 0.000131459972816854 1.83288466400153e-09 0.000247119342547371 1.66941609950312e-15 0.000247964758775782 5.38578920973174e-13 1.42280447873775e-10 2.78356782748233e-11 XM_002690169.2 FAXC PREDICTED: Bos taurus failed axon connections homolog (Drosophila) (FAXC), mRNA. 0.0 3029 100.00 0.187088861634519 NM_032511.2 FAXC Homo sapiens failed axon connections homolog (Drosophila) (FAXC), 0.0 2533 75.47 0.397145724160999 TCONS_00235533_1 sp|Q5TGI0|FAXC_HUMAN FAXC_HUMAN Failed axon connections homolog; 9e-90 270 99.22 0.992248062015504 1 coding 0 0 0 0 0.562889847340371 0.287985606264612 0.0699035771977667 0.162618530686008 GGTGCTCGGCACTGGACGGTGCAGGTGACAAGAAGTACATCATGGGGCCCAAGCTCTCCACCCTCGATGCTACTGTCTTTGGACACTTGGCCCAGGCAATGTGGACCTTACCTGGGACGAGACCTGAACGGCTGATTAAAGGTGAGCTGATCAATCTCGCTATGTACTGTGAGAGGATAAGGAGAAAATTCTGGCCTGAGTGGCACCATGATGATGACAACACCATCTATGAGTCAGAGGAGAGCAGTGACGGGAGCAAAACACACACACCCCTGCTGGATTTCAGCTTTTACTCAAGGACAGAGACCTTTGAAGACGAGGGAGCAGAGAACAGTTTTTCCAGAACCCCAGACACAGATTTCACTGGACACTCGCTCTTTGACTCTGATGTGGACATGGATGACTACACAGACCATGAACAGTGCAAGTGATGGGCAGCCTCGCTGACCCTCCTCTGTTGGAGCTGCCACTCCCTGGGGTCAGTCCAGTTTCCCAGGCAGAAATCCCATTGAGCTGGGAGGAGATCTTCGTGCTTGGCACAGTTCTCACAAGCTAACTGGAGTAGAGCAGCCTTATTTCTTTTTTGTACAAACAAGACACAGAACCATTCCAATGGCTCCATTTAAAACAAAGAGGCAAAAAAATAAAAAAGTCAGCATGGTTCCTGAAATCCATTTTTGTTTTCATTAGAAAACTAACATTGTGTGGTAGAGCAGTGCAAGTGCGGGTTGTCCACAGACCGCTTATACGTTGATCCCCTGCAACCTGAGGGTTTAGGTGTGAGATGGATCCTTGAACATCCTTCATCCAGTAGGATTCAAAGTCATGAGTGATGTCATCAGAAGGAATGCAGGAGATAAATGTTCTTTGGTGGCCACTTGTATTTTCTGTGTGTATATTGTATGTTGAAATATAAGTCAAATAAAACCCATAGATATTCAGTGAACACCTACTATGTGCAGAGCACTGTGCTAGGTGCTAGCCAGTACTGGTTTTATCCTAAGCCCTGCCAGTGACTAGCTGTGTGATTCTGGGCAAGTCCCTTAATTCTTGTGTGCCTCATTTCCCCCACCGGTGAAGTGGGGGACAATAGTCTCCACCTACCTACCTCACAGGGGTGTTGTGAGGATTCATGTGGTAACATTTGGCGCTTTCAACCTCTAGGAAGAGGTGTGACATAAACACATTTTATTCTTTAATGTGCTTCGTGCGTGTGAAGATCGGCGGGCGGAGGAATTCCACATTCAGGCAACAGCAGCCACGGTCACTCGCCCAAGCCGAGCTGATGGAATACACACCAAGGCACAGTTAGGACGCGCTCATCATCCTCTTTGTGATCTTGCTTGAGTTGAAACCTTTCGTTGAAAGAACCTTGGAAATATTTTTACAGATCATCAACAGCTACAAACAGTCTTCAACTCTACTGTATATTTGCAGAGAAGTCTCTTTTGTTGTCTGAACTCACACTGGAAAGCTGTCCTTTGTTGATTCCGGAGTGTTAAGTTGCCTATGTTTGGATTACCTGGAGGGTATAAAGCTCAGGAATAAGATCTATTTAATAGAAGTGAAGGGGAAAGGATTTGATTGATTTTTTTTTAAGCAGAAGCTCGCCAACTTGTAATGTCTTTTTTGAAAACAAACTTTGCAAGATGTACTGAAAAGATGAAGCAGGAAGAAGATCGTTGTAAATGGTAGCAAAGCACTTTGTGCCGTGTAGACTCTATGCAGTTTTTATTAATGCAACTTTTCTGGTCTTCTCGGCCCTTGTCCAGTGAGGGGAAGGCAATGCTGAGGAGAATCTTAATGTTTCTTAAGGATGTCCCCTCCCCTTCCTGTCCTCTCTTTCCCTCTCCAGTGTTGACTAAGGCACTCTATCTCTGAAGACATGGTTTTGGTTGACTTAGAACATTTTCCAGTGAAATATGGGGTGAAGATCCTAGGGCGATGGCTGTGGATCTGGGCTTCTGACCACAACTGCCTGGGGAAGGGCTATTCCTAATGGGGTTAAAAAGGAACTTCTTAAAAGACAGCAACTTCTGAGAAGTTCATATACTTTATTTGAAAAAGACTGAATATAGTTTTGGCAAAACAGTCCTAGAATGCTGTGGATTCACAAAGATGTAATGGGAGAGAGTTTTTGAGGTGATTTACCGTTTAAGCAATGTATAACTGGGAAGAAGTGCTGAAACACTCTAAGCTAAAGATTTTTATTCCACATAAAACTCATTTGTTAGTATCTTATCAAACCCTTCATCTTTGAGGGGACTGTTTGCTGCCTAACGAGAATGTGTTGGAAGATATATGAATGGATAAGCCTATCTTGTTTCCAGTATCATTTCCAGGATTACCCACCTCTTATCTCTTTCACAAATGCATTCCAAGACCAACTGGTGGTAGTTCTGTGTGACAGGGAAAGTCCTGGCCTGAAAATGTGAATGGAGTCGACAGACTCTGGACCTAGCTCTGCTAAGACTGAGTTGCCCTTTCCCCATCTTCAGCGGAAAAGAGTTGTGTTTGAAATTTTGTCTATAATTTATTCTTCCTGTATAGCACAAAGTATACTGTATCTTCATGACAAGAAGGTTTAAGTTATGAGTATGTGGGGTCACATATTTTTTATTGTGTATTACTTGGAGGGCACATCCATGGAGAACCAATATTAAATATGTGAAACCTTCATTCATTCTCTCCAGGTGCCTCCCACGGGGGCTGAGTCCTGAGTACTGCCCGACCCCTCATGTTTGGGTACTCAGCATTTTGTAGGTATAACTTGATTAGGAACCCCAGAATATACCCAGGCTTTACTTTCCCAAAGTGGGTTATGGAAAAATAATGACTAAGACAAAACCCACAGTGATGTGGGTGACTTACGCAGTCTTGATTAGGTGGGCTTTAATTTTATATGTTTCATTCTTAGGCTGCCCAGATTGAACTGTTCTCCTATTTGATGAACAGGTGCTACTTATAAGAAAAATAACAAGAAATTAGGGGATGTTTTGGTCATCTGACTCTCTTGTTCAAGTTCTGTATTTCTTTTTTATTGGAAGATAACTTAAGGAAGTGTGATCTTTAATGCTAAGAGATGCTTTTGGATGGCCAGAAGACCTGGGGGCTACCTGTTCTTTTTAACCTTTCATTGTAAAAATTAAATTCTGTCTTTTTCTCTACTTCCCTTTGCCCCACCCCACCCTCATCTCCACTTGTCTGGATGAAGGAGCAGCCGAATTATACTTTGCCTTGCATATGTCAGAGTAGATAACAAGGATGATTTAAATTTATGCAGAGGTAAACTGTCTTGCCAGAGGTTCCCATTTTTTTATAACATCATGATTTGTGAATATTAATGCTACCAAAGTGATGGGCTGCCCAACTGACTGATCACAGACTTAGAACAAATGGACTTGAACTAGAATTAGAACCAGACTTTGAACTAGAACATGAGCCCTACTTGTGTGTACTGAGGTATGAGGATATGTGTTTGTGAAACAACTAGGGTTCAAGGAAAGGAGGTGTTAAGGATTGTAGCTGTGGGAGTCTTGCCCAGATTACTCGAGAGAAAGTATAGACTCATAGACATGGATAGCTGGGTGGTGGATTTGCTCTGGAAAGCCATATTTATTTGAAGGGCAGGCCCAGAACTGAGGTCTTTCACCTTGCCTTACAGAGTTGTTGCCATTACATCACCTTGACTTGGATTATTTTTAAAACCACCTCCCTGAGCACTCACTCCATGTTTGTAGAACGAGCTCATCCCAGCCTCTCAGAGAGTGCTCGAAATCTTTCAGTTTTGTCCCCTGTATCTCTTTACCCTGGTCAGTTCAAGGGATCTTTGTTCGGTATCTACTCTGTACAAAGTGCTGCTTGTGCTCTGTGAATGTCACCAAGATGGACATTTAAGTTACCAAGACCCTTGTTCTTGGATTAGATCTTTTAAGGAATCCGTGCCCATGTGATCTCTCACTAGGTATTTAGTTACTCACTGATGAGTTGATAGCCCCTTACCCTAAGCCTGGCCCTGGAATCCACACTGGATATAGAGTGGTGAACAGATGTGGCGTCCTGGTTTTAGGTATTCTCTTTTGCCTAAGCTTCTGTGATAATCTCTTTTACATGCATCGCCACTTCCCTGATCCATTCTACCCATCATCTTAGATTAATATTTCTCAAAACCCCCATAAGGCACTGTATTGCTCTAGGATGAGGTATTCCTTTGGGCCTGGTGTCCACAATTTTTATTCATCTTGTTTGCCAGGGCTCCTCCATGTAAGCCATCCAGTGGATCCAGGCTGGTCCATTTGCTGTTGCCTAGACATGCCTCACGTGCTCTGCTCTGTGCCTCCATTCATGGCAGCTCCTCTCCTGAAATGCCTGCCCTTCCTCTCCTTTGGCTCACACACCTCACATGGCCCAACCTTGTCAATTCTGCAGGACGAGGTCTCAGCTTATTGTAACTCCCACTTCCTCTAGAAACACAGCTCCCATCACTTCCTTCCCTGAAGGTTGCATAGGAGAAGGGATTCCCAGGAAGAGGGTCATACTCTAGAAAGATATTGGGCTTCCTTGGTGGCTCAGCAGTAAAGAGTCTTCCTACAATGCAGGAGACCCAGGAGATGTGGATTCAATCCCTGGCTTGGGAAAATCCCCTGGAGGAGGAAATGGCAGCCTACTCCAGTATTGTTGCTGGGAAAGTCACATGGACAGAGGAACCTGGTGGGCTAGAGTCCATGAGTTTGCACAGAGTTGGATACGACTGAGCACACACACAGTGGTTTTTTAATTTTTGTGTCTCCATTGATAATCTAATGCAAGTCCTATGCCCTAGTCCCAGAAAAATATGGAGATATATGAAATTTTGCATGTAAGTTCAGGAGATGTAGAAATGTCTTGAAACTACCTGTGGATTCCTTAGAGGGTTCATGGACCACAGCTGAAGAAACCTTGTTTGAAAAACAGCCTTTAAAATTCACAGCCTTTAAAATTCAGTGTTCATTCTTGCTTGATTTTATCCCAGCCAGACAGGAGATAAATTAGAATGGGAGGTGCAAGCACAAGTAATCTGTATCGTTATCCACATGGAGAGTGCTCTGTGACAGGGAAGGAAGAAGAGGTGCTTCACACTGATTGAGAAAATATCCTTCTTCTGACAAGTTTGGCATTTTGAAAGTGAAAGGATTTTGTTGTCATCATCATTGTCATCTACCTTCTGACCACCCAAAATGTTGATTTTGCAAAATCAGTTCAGGGACAGGGGCTTCACTTCAGCCCTGAAACGCACCACTTCTGCATGGATAAGCTGACTGGTCTGTGGCTTAAGGTACTAGAGAAGAAGCTGGATTTTTCCTTATAGGAATAAGTTCTGCACAATCAGGTTTTTCTGCATTAATTAATTAATTGAACAATTGTTGAGTGTATTTTCAATAAAAGGATGGTGCCTTTTGTTGATAGGAAACAACTCAGGCTTTTCCTCCTCTTCGTTTTCTTTCCCTTCTCCTTCTTCATCTCCCCCATCCTCTCCCTCTTTCCTCTCCTCCTCTTCCTCTTTTTTTTTTTTTGTTAACGGGTGAGACTATTTTCATTGCTCTTGGCTATTACCCAGGATCCTTTGTTCTCCTGTCTATGCAGTGCTATTTAAGAAGAACAAGGACTGATGAAAGTACATTCAATGACAAATATTTCTTGAGTCTAAATGCGGAACTCTGGCAACCCATTTCTAACAGGTCCAGGATCGATTGCCTGTGACTGTGGCATGCTTGACTTTTATTCATTTACTTTTGATGGTCTGGATGCAATTTGCAAAGTTCAAAAGGACCCCTTGGTGTGTGAGCAGGAGGCTCCTCTGGATGGCAGAACGCTTGCTAGTGCCAGGAGTAAATGCAAATGGATGTGGGATTTTTTTCATTTTTTTAGGTTTTTAGTCCCTGACTTTAAAGAATATCTTAAAGGTAATTAAGGCACTTAATCTTTAAGGTAACTGGAACCAGCAACACATTGGCCTTGCCCCTTAAAGGTTACAGAGAATACTGAAAACATTCTCTGTAAAAGGAAGCAACTCACTGTTTGGGGGCTGACAGTATGACCTCCTTAACCATTCTGGCTCTGGCCAAACAGGGACTTTGTCCCCAGACCAAAGCTCTCTGAAACTTCTGCTGCTGGCTAGACCATTTGGATGCTCAAATGTCAGGTGGATTATTGCCCCTAATTATCAAATTTGTAGACAAATAAAGGGGACCATTGCAATAATAAAACAGCTTATGAATATGGTCCAGCCAGCACCAATACTCTTGACCATTTCCATGGGGAAACAAGTTATCTAGAACCAAACATTGGTACAGTACTTAGGTGTTCCATACACAAATAATTTCAGCAATTAACTTGATTACTGTTATAATGTTCTTCTTAAATATTTTTCAGCTGCTCTTGTCCCTAATTACAGCTTTAAATATTTTGAAACAATTCACTAGCTATAGAGTGATATATATTTATGATGCTATTTCATTTTATGAAAAGTAGTATTACTAAAAGTGACTAATTCACCTCCCATCCCCCATTGGCAAGCATCTTTCCCCTCCCTTTTTTATTTTTTACTTTTAGCTCTAGAATAGAGTAACTTTGATTTATTAGTATAATTTAGACCTTCTTTAGTATTAAAAAAAAGTTACCCCATGGGTTTGAAAACAGTAGGAGTTAGCTCCTAAATTGTCAAGTTAATCAGCAGTGGCTAAACAGATAGCAGAGGGAATGTGATATAATTCGAGGCTAGAAAGGAGTAATGCTTTGGGTACTTACTACCTCCCTCCCTTAAAAAATACTACAATCTATAGACTGTTCCCTTTAATAGTTGTTCAGAATTGGAAGTCTTCTCTCATACTTGTTTCTATCCCCCAATAAGAGATCATGTTTGGCTTATTAAAACATCAACCATGTCCAAATGATTGTATTTTTATCTTTAACAAATTATATCTGAATTTTTTTTTTAGCAATAAGACTAGAGATAATGTTCAAATTTTGGAGGGAATCTCTGCTTCAGTAGGAGCAACATGTTTGTGTGACTCCTGTCAAAATGACTTCACCTAAAGTAAGCAGTCTCGTGGGATCATGTTTATCAGAAACGTGTTTTTCCTAGTTATCTGTATCCTGCTGAGTGTCTGACAACTCCACCCTTGATGAGGGTGACGTTCCCCCCATGGTGGTGGTTGAAAAGATGAGGATCCAAGTCCTTCCTCTGGTGGTGTTTGAATTTCACTGAGTGGGAGGAGAAAAGGAAAGATGAACAGATACTGGACTTCAAGCAATTGTGCGGTGTGGCTGTGTTAGAGAAGTGTCAGGCACGTTGAGAGTGTTCTGAGTGGTGGCATCTTACTAAAGCAATCCAAAGGACTACGGGTTTAAATGAAAGATAAATGCAATCTGTAGGGAAGGACTGTTGTGGTTATTCCAGTGGCCCGTGCAGCAAGCCCTGGAGTAACCTTGATCTTTGTCCTAGTTTCTGGCTTGTTCTCGTCCTACCTGAGTCTGAGCCTGGGAACTGGAGGAGTGGCCCTGGTGTGTTCACTCCTTTGATTCTGGAACTTCCTTCTTGTCTCTCAAAAGTGTTTGTGACATAGAATTTCCATTTTCTAATATAAAAAATGTACAGAGTATATTTGTATATTTGTTTGATAGAAGACCCTTAAATGTTTGGAGACACCCACCTCATCTCTATGTAGGCAGTGGTCTCCAAACCTCTGCGCTCATTGACCTCATCAGTAAGACTTTCTAAGCATGCCCCGCAAGGTATTTATTTAAACTCACACACACTGCTCCAATGATTTGTTATTAAAAACATAGCAAACATAGAAATTTACAGGGAATAGTCTACTCGATAGAGTTTAGAGTATGGGGCAAGAAGGACTTAAAGGTAGCACGTAGAAGGCAGCAGTTGGTTAGAGAGTGTGTCTATATTGTTGGTGGGCAAGTAGATGTAAAATAGGCATGGAAGCATGATTTTAGATCAAGGTTATTCATTCATTCATTCTTAAGAGCCATTTTTGGCTAGAAGAAAAGAGTGAATAATTAGATGTTACCTTTATAAGAACTCTTTTCAATTCTGTTTTGGGGACCACTTGATATAGTACATCTCTTAAATTCCTGAAAATTTTCTCAGTACGCTGATTTAAGCAAAACAAGCAAAGAAAGGAGGGAGGGAAAAACCTCAATAATGCAAATGCTGACTCTCATGCCTGAGAATTTCTGAATCTGAAAAGCACGTTTTGATAATTCCTGGTAATCATCACCTCACTGATTATTTGTTTTTCTTCTATTTGTTTATTACCCCGTGTCTCCAAATGTGTGGAAGATGTACAGATTTATTTTCAGATACCTGAGATAGGAGGGGCCAATGTTGGTATAATTGAACCTACATTTCAGCTGCTTGGGGGCTGATGGGTGGACACTGCCCGGAAACAATGACTCGCACCCTCTGTTTTGCAAACACAGTGGATAGCATCTTGCTGAACGAGGGCCTCGATATGGAGGCGGCATTCCAGTGTTTACTTCTGGACCTATGAGTTCCTTTAGCACAGTTATTGTTAGTAGTTTATAAAGCCATATTTAAACTTGTACACTTGATTGTAAGATAGATTTGAATTGTGCACTATGTTGATTACTGTATATAAATGTGGAGATTCTGTATATTTGGTCTCATTGCTGTATGTATTTGATGTGTATATGATAACTAATGGATATGAAATAGCTGGCTGTGAATGTCTTTATTCCAGTTTGCTTCTCTTTTGCAAATTTGAATGTTTAAACTTTACACCCATGGGGAAAATCTGAGATATTTTTTGCATCTAATATACTGTTAAGTGGTGGTCTCTTAGATGATTGGGAGAATATTTAATTTTAAGGCTCATGTATAATGAGAAGGGAGGTAATGAATTTTTTAGGCGTATGACTTTCTGATAGAATTTTAAATGAATGTTTTTTAAGTA EMBV3_16420 GTTTGCTGGGTCAATTTGTTGTACTTTATTTTGTTGGACTGTTTTGACTGTGCTCATGGG Gene BVV0102_122433 + 0 NULL GK000028.2:43003183-43160796 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01022 CTGTCATGTCTACAAGGCTTCATCAGCCTCTGTGCAGCGTTTTGGCTTGAGTGGAATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42462 GAGTCCACAGCAAGTGCTACTTCCAGGCTCAAGCCCCCTGCCACTATGAGGGGAAATATT Gene GeneID:100295064|LOC100295064:XM_002689681:102_cdna Constitutive 0 NULL GeneID:100295064 8 GENE LOC100295064 NULL hypothetical protein LOC100295064 EMBV3_05112 TTTTGAAGATCTCCACAGACTAGAATGGCTAGTACTGATGAATAATGTCCTTACCCGCTT Variant GeneID:532277|RXFP1:XM_002694415:17_cdna 668^739 3 EMBV3_12837 GeneID:532277 17 GENE RXFP1 RXFP2 relaxin/insulin-like family peptide receptor 1 EMBV3_01562 GATGAGGGTTGGCTTAGAGTTCAGTTTTCACAAACAGCCGCCAGTTGAGGAAGGTTCGAG Gene BVT0102_230365 + 1 EMBV3_41105 GK000024.2:61512803-61531357 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139545 1 XLOC_084926 NonCoding TCONS_00139545 XLOC_084926 NonCoding NonCoding - 24:61515255-61515850 - TSS104344 292 1 TCONS_00139545_1 58 2 0.511784511784512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000343811134332829 0.000221653666319149 0.000509420446464915 0 0 0 0 0 0.000240787523632271 0 0 0 0 noncoding 0 0 0 0 0.053219010126334 0.653227139216527 0.0065116043450161 0.918743948348801 ACTTCTTTTCCTGTGTGTTTACTTCTTGCTTGTGACACGTGAGACCCACTGCCGGTTCTTGTCTGTGTCCTGATGCTTGGTCCTTCCGGGATGTATGAGAGGATACGGTGCTTCTCAGCTTTCGCAGCGCTGGGAATCTCCGTGAACACAAAGAATCATCCCTATTTACCTTGGGTGAGACAGACTCAGAGACAATTCCAAGATGAGGGTTGGCTTAGAGTTCAGTTTTCACAAACAGCCGCCAGTTGAGGAAGGTTCGAGAGACGAGGATCACTGGAGGGAGAGGCTGAGG TCONS_00139546 TCONS_00139547 TCONS_00139548 s 5' 15508 TCONS_00139546 TCONS_00139547 TCONS_00139548 s 5' 16102 EMBV3_13610 GGATTCAGGCACCATCCAGACGCTACTGAACCACAGAAAAAACCTCCATGCCCTACTGAC Gene GeneID:614598|MAP3K6:XM_002685691:350_cdna Constitutive 0 NULL GeneID:614598 2 GENE MAP3K6 NULL mitogen-activated protein kinase kinase kinase 6 EMBV3_35961 TGCCTCTTGAAAAGGGAGAGCACCTCTAAGAAGGAGATAGAATGGAAACAGGTTGGAATC Gene GeneID:100126179|ZNF75A:NM_001109965:10_cdna Constitutive 2 NULL GeneID:100126179 25 GENE ZNF75A MGC155127 zinc finger protein 75a EMBV3_28453 TAGGAGTGAAGAGGCTGCAGAGAAGGACGAATGGGAATCTGAAGAAGCTGCTGATGGGGA Gene GeneID:509378|JSRP1:NM_001046031:45_cdna Constitutive 0 NULL GeneID:509378 7 GENE JSRP1 MGC134155 junctional sarcoplasmic reticulum protein 1 EMBV3_22024 GTTTTTGTGTAAAAGAGCTGCTTCAGAGTGTGGCTATATGTGAGAGATGCCCCCGGCTTC Gene GeneID:617236|SUMO3:NM_001076449:50_cdna Constitutive 0 NULL GeneID:617236 1 GENE SUMO3 SUMO-3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) EMBV3_19406 CCCCTCTGCAGCCACCCCAACCCACGCAAGGATGTCATTCAAGTCTCCAAGAAGTTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36215 TTTGGATGCCAACAAAGGAGGTGGACATCAGACCCTGGAATCTGTTAAGGGAGTGACGGA Gene GeneID:281127|DSC1:NM_174044:55_cdna UTR3_Alt 2 NULL GeneID:281127 24 GENE DSC1 dg3 desmocollin 1 EMBV3_19502 CCGCTGGGCATCTGTTCTACTGAGGTTGAGTTGCTTGGTGTCTCTAGCTGGTTCTGTGTA Gene GeneID:445422|VKORC1:NM_001003903:242_cdna Constitutive 1 NULL GeneID:445422 25 GENE VKORC1 NULL vitamin K epoxide reductase complex, subunit 1 EMBV3_42451 GGCTCCTGCCTGCGTTGCAGGGTATACTAGATTTCATTGTTGTTTCTCATGGTCCTTTGG Gene BVT0101_039542 + 0 NULL GK000001.2:70947215-70954510 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003872 TCONS_00003870 TCONS_00003871 TCONS_00003873 1 XLOC_000928 Coding TCONS_00003872 XLOC_000928 Coding Coding FYTTD1 1:70952413-70984322 = TSS1959 3411 1 TCONS_00003872_1 318 9 0.893380970289583 0.00192007996144561 0.00146556981002099 0.00126386976436869 0.00124901557448957 0.00181268904300322 1.51006879877469e-06 0.00145034611661723 0.0013838814617212 0.00357020097503649 0.000478817618974966 0.00019664705624513 0.00014264788963725 0.000449177736312973 0.000659004959134687 0.000243165920536011 0.00466455025552485 0 0.00638925577392133 0.00206859265086308 0.0014821227280306 0.000508441976453256 0.00237131977025235 0.00128666103823826 0.00375281545122269 0.00140323552520387 0.00144732475316412 1.76119014224587e-05 0.00110710291665506 0.000422472707907355 0.000377037132948513 NM_001001137.1 FYTTD1 Bos taurus forty-two-three domain containing 1 (FYTTD1), mRNA. 0.0 2102 99.00 0.349457637056582 NM_032288.6 FYTTD1 Homo sapiens forty-two-three domain containing 1 (FYTTD1), 0.0 3265 81.11 0.990325417766051 TCONS_00003872_1 sp|Q17QU6|UIF_BOVIN UIF_BOVIN UAP56-interacting factor; 0.0 639 100.00 0.99685534591195 1 noncoding 0 1 1 1 0.0284491858865722 0.86373156155586 0.0139858909875419 0.795824058115011 GGGGGGGGGGCGCGGACTCCGTCAGCACGCGTGCGCGCTCTCGCGGTGCGGATAGTCTGCGTGCGTGAGTGGGAGGTGGCAGGCCTCAGCCTCTGGCCTTCTCGTCTGACTGTTCCAGCTCGACGTCTCCAGCCATGAACCGGTTTAGTACCCGGTTAATGGGAGCCACCGCAACCCCGCCGCCTGCGCCGCCGAAAGCCCGCAGCAATGAAAACCTGGACAAAATTGATATGTCTTTGGATGATATCATCAAGTTGAATCGAAAGGAAGGAAAGAAGCAGAATTTCCCGAGATTAAATAGAAGACTTCAGCAAAGTAGTGCCAGGCAATTCAGGATGAGAGTAAGATGGGGTATTCAACAGAATTCTGGTTTTGGTAAGAATAGTCTGAGCCGTAGAGGAAGAGTGATGCCTGGGAAGAGACGTCCTTATGGAGTTATCACTGGCCTTGCAGCTAGGAAAGCAACTGGAATTCGAAAAGGAATTAGTCCTATGAATCGACCACCTCTAAGTGACAAGAATATAGAACGATATTTTCCAGCATTAAAAAGGAAGGCAAACCTTCTGAGACAAAATGAAGTGCAGAGAAAACCAGTTGCAGCTCTCAAGAGACCTAACCAGTTAAATAGAAAAAATAACATTCCAAATAATTTTACCAGGAGTGGAAATAAATTAAGTCATCAGAAAGACACTCGTCAGGCAACTTTTCTTTTCAGAAGAGGCCTGAAGGTTCAGGCCCAGTTGAACTCAGAACAACTGCTAGACGATGTAGTAGCAAAGAGAACTCGTCAATGGCGAACTTCCACCACAAATGGAGGAATTTTGACTGTATCCATTGATAATCCAGGAGCAGTGCAGTGTCCAGTAACTCAGAAACCACGATTAACTCGTACTGCTGTGCCCTCATTCTTGACAAAACGGGATCAATCTGATATAAAGAAAGTTCCTAAAGGTGTCCCCCTACAATTTGACATAAACAGTGTTGGAAAACAGACAGGTATGACTTTGAATGAGCGATTTGGGATCCTGAAGGAACAAAGAGCCACTCTCACTTTCAACAAAGGAGGAAGCCGCTTTGTAACCGTGGGATAGATCCCATGTCACAGGAACTTTTCAGTGATGACTCTTAAAAATTTAATTGCTTGAAGAGTTCATCACAGAAATTCAAGAAACTTTATTTCAAAATATTCACAAGGCTAAATAACTCTTATTTTTATTTTTGAAGTTTTTTTTAAACATGTATAAATAATGCCCTGAAAGAATAACAGGGAATATGCCTATGTGTTCTTAAAGATTTCATGGTTGGCCCAGACAGAACAATTCTCTATTTGACTTTTTTGATTCCTCATGCAGCAGAAAGAAGGTGGAAAGATAGAAATTGATTATTTTATGATAGTGGTATTTGGGATCTCATCACCTTTGCCCATTTTTTACACCTTGCCATTGTAAATCTTGGTCTTCAAGATTTGAAATAGGTCCCTTTGTTGCTGTCACTTATACTTTAATAGTGTTGGTGTAATAAGTGCAGTTGACTTTTCTGCATTAGGGATATAAAAAATTATTAGAATTTCAGTTTGGGGGTTTAAGATTTATGGGGATATCTGGAACTTGGTTCATTTTTCAAATAACATTAAGTTAATCCTCCAGAGTTGTAAATCTTTAATGCTGAACTTTTTTTTAATAAGAAATGTGACTCCGGGCATTAGCTTCTGTTTAAAATGTTGGTGTTTAAAGGCTGTAAATGGGTGTTTACAAAGTTATCTGATAGAGCCTAATTGGAGGAAAGTCCAGAGTAAAAATCTGGTAATTTGTGTGGAGAGAAAGTAGCAGGTGGAAGATGGTAACTGAGATGAAGACTTTAAAAGCTAGGTCATAGGTATACTGTTTGAATTTAGTGTAGTTTTGAGTCTAGTGTGCACAAAGTATTCTTCAGATGATATTTGGAATAATTATAATTAAAATGGATTGAGTTCTATAGATATTTTGATAGGAAAATTAGCCATAAAGTCCTGGACTTCTTATTTGAAAAAGTTAAATTTTAAGTTTACTAAGTTGAACAGTATACATACAGCTCTTAAAAAAATATATATGTCACAAGGTAAAAGGTGCAAAATTATAATAGAGTTAACATTATTATGACCTTGTTCTGTACCTTTGCTTCTGATTTCTTGTGTAAAGTTCAGGCATTTGTGGTGAGAAAAGGATTTCCCCCCTCATACTCTGGAGGGTTAGGAGGAGTTAATTTGTTGTGCCAAGCTAGTGCTGAAAGTCCTCAGATGGTTGTAAATTTTAAGTTATGATATAATAGCAAAATGCAGCAAAATATTCAAACTACAGGTTACGAGTTTGGTCATTTTGAAGCTTAACTTTTTGATTTGCTGTAATGTTAAAACCTCTAAGTAGGTGTTAGTTTTCCCTTCAGTGTATAATTTGTGTTGATTTTCCCTGTTAAAACACAAAACATTGTTATGGCTCCTGCCTGCGTTGCAGGGTATACTAGATTTCATTGTTGTTTCTCATGGTCCTTTGGTTACTTGGTTTATGCTAGCCACGGAAAGCTATCAATAACAGTTTCATGCTTATACCAAAGAATTAAATCTGATCCTTAATATCTGGTATTTTGCTTGTAAGTCTACTGATAAGGGATTATTGGAAGCCAGTCATACAATTTGAAAGTAAACTCCAGTCTCTCTGTAGGCCAAGGACTCACTGCAAAACATTTTTGCAAGTATGAATGCTTAGATTTGATTCATGAACAATACATTTTAGACTGGTTTAGAATTATTGATAACTTATTTTAAAACAAAGGAAAAACAACTGAGCACGAGTTTGCTGTCTTTAGAGCAGTTTGTGAAAATACGGTATAAAGATGTTTTCATTTTCTTGTTCTTTTAAATATTATTGTACAGAGCTGTTATTAATGCCTTCTTTTTAAATCTTAAAAATCCCTCCAAATATTGATATTAAGTGCATCAAACAAAATGTCTTTGGTATATTAAACTTTTGCTCTTCATGCATCTGTAATTTCATTTTCTTTTTAAATATAAAATCTTGCCTTTGTTACAGCCAAATTATAATTCTTGAGTGCTAACATGTTGTATAAAAACAAAGGAATATGCTCTTTTGGAGGAAATTTTTCCTTTCTTAGAATGTGGTTGTAGTCATCCTATTTCAGTTATTAAAAGTTTTTTTTTTTTTTTAAAACAAGATGCAACTTAAATTTCCCTTTGCATCAAGGTGTGTAAAAAACATTGATGCAGTGCATCACAAAATGAACGTTTGTATTTAATGAGGAGATGCTTTACACTGTACTTTTTGGTGTTTTTTGGAAAAGTTACCTTTAGATCTGAAGCTGTTCATTTTTAACAAATAAAATATTACAGGTCTCTCATGATTTATTCTTAGCTAAAAA EMBV3_34271 GGCACTAAGCCTATTCTGAGACCGCTGGTCTGTAGTACCTGAATTCTGTTTTGTTAACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09227 GAGCTGGCCCTCTGTGACCTGTGTCTAGTGGTTTCATTTCCAGGGGCCGTGTGGGACGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19223 CCAGAATCATATCCACAGCTGCCAAGGGATGAAACAGTGGAGAACCCTCATCTCCAGAAG Gene GeneID:521431|SCAI:XM_002691584:118_cdna Constitutive 0 NULL GeneID:521431 11 GENE SCAI NULL suppressor of cancer cell invasion EMBV3_09956 CATATGTTGGCTGCCTCGGTTGGAGAAGTGATTCCTTTCTCATTGGTCCAGTTTCCCTTG Variant GeneID:614713|SLC25A26:NM_001103297:62_cdna 610^762 6 EMBV3_35643 GeneID:614713 22 GENE SLC25A26 MGC166132 solute carrier family 25, member 26 EMBV3_21632 AATGGTGCAGAGACCATGCAAGACACCATGCAAACCACCATCCATGTCCCTGTCCAGCAT Gene GeneID:515614|HMBS:NM_001046207:119_cdna Constitutive 0 NULL GeneID:515614 15 GENE HMBS MGC137625 hydroxymethylbilane synthase EMBV3_17670 CCTGGGTATGTGGACTGCTCCTTCTGGTGTCCTGGATCATGAGTGCCCTGTTTTCCTTTT Gene GeneID:786840|LOC786840:XM_002688658:50_cdna Constitutive 0 NULL GeneID:786840 7 GENE LOC786840 NULL similar to CfOLF4 EMBV3_11702 AGACTCTTGTAGCACTGGTCACCTAGACTTACAGAATTATGTCCTCCAGAAACCAGCAAG Gene GeneID:537184|DACH1:XM_002691884:12_cdna Constitutive 0 NULL GeneID:537184 12 GENE DACH1 NULL dachshund homolog 1 (Drosophila) EMBV3_07607 ACCCTCATGGTCACGAGCTCCATTTTTGTTCTCATACCTCTCATCCTCATTCTCAGCTCC Gene GeneID:789358|LOC789358:XM_002697433:10_cdna Constitutive 0 NULL GeneID:789358 23 GENE LOC789358 NULL similar to Olfactory receptor 2J3 (Olfactory receptor OR6-16) (Olfactory receptor 6-6) (OR6-6) (Hs6M1-3) EMBV3_31711 TGCTGCAGGCACACGGGAGATGGCGGTGCTCATTGCCCAGGCCCTGCAGACAATTAACTA Gene GeneID:511124|IMPA2:XM_002697804:418_cdna Constitutive 0 NULL GeneID:511124 24 GENE IMPA2 NULL inositol(myo)-1(or 4)-monophosphatase 2 EMBV3_17960 GAGCTCCAGATGAGCACATTCAGCTTTGGGAAACTTTATTATTTCACCTAGGCTATCTTG Gene GeneID:408001|MAP1LC3B:NM_001001169:87_cdna Constitutive 1 NULL GeneID:408001 18 GENE MAP1LC3B NULL microtubule-associated protein 1 light chain 3 beta EMBV3_32008 AGATGTGCTGTCCACCTTGGTAAAGACACTAGGCAGCCACCTTCATGTACTTACGGCAGT Gene BVV0101_032899 + 0 NULL GK000017.2:54308319-54308682 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075439 TCONS_00077309 TCONS_00075432 TCONS_00077308 TCONS_00075431 TCONS_00075435 TCONS_00075434 TCONS_00075437 TCONS_00075433 TCONS_00077307 TCONS_00075438 2 XLOC_046587 XLOC_047042 Coding TCONS_00077307 XLOC_047042 Coding Coding DDX55 17:54308227-54314431 j TSS57822 1895 1 TCONS_00077307_3 305 0.0437994722955145 7 0.695631146219571 0.00247944015922097 0.00219605801368887 0.00260612524942919 0.00160148583119616 0.000101557061628885 0.000262126291134054 0.00113583861107509 0.00203347991744059 0.0012222453219484 0.00056122412991402 5.47678974918814e-05 4.06869431437851e-05 6.22445723153238e-05 2.95648145085338e-05 0.000400777300268554 0.00491311244142426 0.00362193093112929 0.00400292286595648 0.00381895971451396 0.00256861661952726 0.00174378105074021 0.00138675840227781 0.000667190750237585 0.000975544995940896 0.00339426760981416 0.00208349809488166 0.00215658026490471 0.000959407865360051 0.000215772827309036 0.00157675236725755 NM_001046007.2 DDX55 Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 (DDX55), mRNA. 0.0 2345 99.92 0.687071240105541 NM_020936.1 DDX55 Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 (DDX55), 0.0 1333 89.53 0.528759894459103 TCONS_00077307_3 sp|Q2NL08|DDX55_BOVIN DDX55_BOVIN ATP-dependent RNA helicase DDX55; 0.0 628 100.00 0.99672131147541 2 coding 0 0 0 0 -0.136569739298661 0.397283684313677 0.0247825722519702 0.620642599342096 TGAGCGTGCAGCCTTCAGTTTTGGAATTCCTTTTAGGTTGGTCCTCTGTTACAAGTGTGTTTACCTGCAAGTGACTGAAAACCCAACTTCTGCAGCTCAAGCAGGAGGGGTTTATTTTTCTCCTGTAAAAAGAAGTCCAGAGCACCTGCGCCTGTGTGGAATACTACGGAAAGGCTCTGGAGACCCTGGTGAAGGGTGTGAAGATAATGTGCATTCACGGAAAGATGAAATACAAGCGAAATAAGATCTTCATGGAGTTCCGCAAATTGCAGAGTGGGATTTTAGTGTGCACTGACGTGATGGCCCGAGGAATAGATATTCCTGAAGTAAACTGGGTTTTGCAGTATGATCCTCCCAGTAATGCCAGTGCCTTCGTGCATCGCTGTGGCCGCACAGCCCGCATCGGCCATGGTGGCAGTGCGCTCGTGTTTCTCCTTCCCATGGAAGAGTCATACATCAGCTTCCTTGCAATTAACCAAAAATGCCCCCTGCAGGAGATGAAACTCCAGAAGAACACAGCTGACCTCCTTCCAAAGCTCAAGGCCATGGCCCTGGGTGACAGAGCTGTGTTTGAGAAGGGCATGAAAGCTTTTGTGTCATACGTCCAGGCTTATGCCAAGCACGAGTGCAACCTCATCTTCAGATTAAAGGACCTTGATTTTGCTAGTCTTGCTCGAGGTTTTGCCCTGCTGAGGATGCCCAAGATGCCAGAGCTGAGAGGAAAGCAGTTTCCAGATTTCGTGCCTGTGGATGTCAACACAGACACCATTCCATTTAAAGACAAAATCAGAGAAAAGCAGAGGCAGAAGCAATTATTGGAGCAGCAAAGAAAAGAGAAAACAGAAAATGATGGGAGAAGAAAATTCATAAAAAATAAAGCTTGGTCAAAGCAGAAGGCCAAAAAGGAAAAGAAGAAGAAACTGACTGAAAAAAGGAAAAGGGAAGAGGGTTCTGATGTGGAAGATGAAGACATGGAGGAACTTCTGAATGACACAAGGCTCTTGAAAAAGTTTAAAAAAGGCAAAATTACTGAAGAAGAATTTGAGAAGGGGCTGTTGACAAGTGGCAAAAGATCAACGAACAAAGCAGATTTGGAGATCTCAGATTTGGAAGATGACTGCTGATTCCCGCCCCTCAGGTGAAACGCACAGGAGTGCGGAATGCGGGGAGCTGGCCCCCACTCGGCAGACAGCTCGCGCTTCCTTCTACTGAACATCAGAACTTCAGCAGCTGTCGGGAGCTGCTGTTGCAGAAACGGCAAATGTGAGGGGTTTCACGCTTGTGAGCATTTTACTAAAAACATACCAGCCTTGAAGTCTAAGAGAAGAAAACGTAAATTTACGTAACTGTAAATAATAGATGTCAATATTTATTTTGATGGGTTACTTAAAGAGCTCATATTTCAGTGGCTATTTTATACTCATTAAACTTATTTAATATAAAGCTACTGAAGTAGATTTGATTTGAGAGCCTTTAACAGTTACTCAGTGTTTTCCGGCACCTGATCTCCCTTCCCTGGGTGTCTTCACCTCTGGACTCGCGGTTTTCTCTTTGATGTACTGCACTGAACACCCACACAGCCCGTAGTACCGTTTTATTGGTGAGTATATGAAAAAGCAGCAGCAAGTCATTCTGGGAAAGAAAATGATTACACCTCCTGTTGAATAAACTGTAGTTCTAATCCACTGCCTTAAGTACATGAAGGTGGCTGCCTAGTGTCTTTACCAAGGTGGACAGCACATCTAGTGTCAGAGCCCTCTGGCTGGGCCAGGGTCAGCTTGAAGTGCAATGCGACGCCGTATCAAAATCTTTCATGTAATTTATTTGAAAAGATGCTGAGTTTGTTCCCAAGAACGATTTTAAAAAGCTGTTCAGGACCCAAATATGTTTCAAGT EMBV3_17726 CACATCGCTGTTGCCTTTATTGGCCTCAATTCCTACTGTGAGCAGGAGGCGCTGGTGACT Gene BVT0102_280164 + 0 NULL GK000001.2:150349312-150360987 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002651 TCONS_00002642 TCONS_00002647 TCONS_00002648 TCONS_00002645 TCONS_00002649 TCONS_00002650 TCONS_00002640 TCONS_00002646 1 XLOC_000656 Coding TCONS_00002646 XLOC_000656 Coding Coding MORC3 1:150331249-150352102 j TSS1347 5369 1 TCONS_00002646_6 601 0.114360216055131 10 0.742998273546902 0.00084784350002041 0.000775151328591472 0.000540457546355576 0.000332909763246423 0.000526540935255898 5.37886092834128e-08 0.000317835879042911 0.0011747204473506 0.00149480012049001 9.98091772615281e-09 0.000117567432583179 8.36114724695329e-23 5.314870115841e-09 3.40912668537455e-09 0.000108477005762789 8.73550268987716e-06 0.00132037800500709 1.21430542695595e-05 0.000422114881096433 0.000289818054980897 0.000559593115104996 0.000275950620809033 2.96748272761208e-17 2.1455801968676e-07 2.60405722000519e-05 3.09513262649726e-06 0.000368113876871645 0.000150048874459766 0.000101160225733448 0.000393626621297005 XM_865894.5 MORC3 PREDICTED: Bos taurus MORC family CW-type zinc finger 3 (MORC3), 0.0 5674 100.00 0.585770162041348 NM_015358.2 MORC3 Homo sapiens MORC family CW-type zinc finger 3 (MORC3), mRNA. 0.0 3508 85.04 0.587260197429689 TCONS_00002646_6 sp|Q14149|MORC3_HUMAN MORC3_HUMAN MORC family CW-type zinc finger protein 3; 0.0 996 83.22 0.998336106489185 2 coding 0 0 0 0 0.0886876205864433 0.561419874778771 -0.00107821732881907 0.981351209551148 CCCCTGCAGTGTGAGAGACCTGGGTTCGATCCCTGGGTTAGAAAGATCCCCTGGAGAAGGGAACGGCTACCCACTCCAGTATTCTGGCCTGGAGACTTCCATAGACTGTATAATCCATGGGGTCTCGAAGAGTCAGACACGACTGACTTTCACTTCACTTTGGACCAGATGGTAATTGGGAATGCAGTAATGGGGGGAGAGGAAGGCAAACAACATGGGTGTTGGAGTAGTGGGGATTATAGACTGCTATTTCCTAAAACCAACTCATAATAAACAAGATTTCGATTATACTAATGAATACAGGTTAACAATAACAGCACTAGGAGATAAGCTGAATGATTACTGGAATGAAATGAAAGTGAAAAAACATGCAGAATATCCTCTAAACTTGCCAGTTGAAGATATTCAGAAACGTCCTGATCAGACATGGGTTCAATGTGATTCCTGTCTAAAGTGGCGAAAATTACCAGATGGGATAGATCAACTTCCAGAAAAATGGTATTGCTCCAATAACCCTGACCCACAGTTCAGAAATTGTGACGTTCCAGAAGAACCTGAAGATGAAGATGTGGTGCATCCCACTTACGAGAAAACCTACAAAAAGAAAGACAGGGAAAAGTTCAGGATCAGACAACTGGAAACAGCCCCTCGGATTCATGCCGAACTCCTGTTTCCAAAAACCCCTGTGTCAAGTCAAACCTTTACTCCCGTTAAGGAAGGTGTTCCACGAGGACATCTTTCAGAAGTAGCAAATACTTACTCAACAAGGCTTATAAATCATCATCGGGGTTCACCCCAGTCTGAACCTGAGAATAACAGCCTGAAACGAAGACTCCCTACTCGCTCCTCAATTTTGAATGCAAAGAATCGGAGATTGAGTAATCAAGTATTTGAAAATTCTCATCAAGATGATGATGATGATGAAGATGTCATCATCTTAGAAGAAAACAGCACTCCCAAGCCTGCAGGAGATGATGATACTGAAGTGAAATTGCAGCAGAGCCCCATGGAGCAGAGTGGTGTGGAAGTGGAGCCTGTGGGTGACAGTGAACCTTGTGGCCAGACTGGCTCCACAGGTACTTCGACATCCCAGTGTGATCAGGGAACTACCACAGCCACCCAGACTGAAGTGCCAAGTTTAGTCGTTAAAAAGGAAGAGACTGTTGAAGATGCAATAGATGTAAGAAATGACACAGCCGCACTGCCAGCCTGTGTGGAAACTGAAGGAAAGACACATGAAACCCAGGGAACCTTTGATAAATCTGCTAGTGACGCTAGTTGCAAGTTAAATGAACTAAGAAATGAGCTGCTTCTCGTTACCCAAGAAAAAGAAAATTATAAAAGACAGTGCCACATGTTCACTGAACAAATCAACGTGTTACAGCAGAGGATACTGGAAATGAATAACAAATACGTGAAGAAGGAAACTTGCCATCAGTCTACTGAAACTGATGCTGTATTTTTACTGGAAAGTATTAACGGTAAACCTGAAAGTCCAGACCATGTGGTGTCTCAGTATCGTCAAGCCTTGGAAGAAATCGAAAGGCTGAAAAAGCAGTGTAGTGCTTTGCAACATGTAAAGGCTGAATGCAGTCAGTGTTCCAGTAGTGAGAGTAAAAGTGAGGTGGACGAAATGGTTGTGCAGCTTGATGACGTATTTAGACAGCTGGACAAATGCAGTGTTGAGAGGGACCAGTATAAAAGCGAGATTGAATTATTGGAAGTGGAAAAATCACAAATCCGTTCGCAGTGTGAAGAACTGAAAGCTGAAATTGAACAATTAAAATCTGCAAGTGGACAAGTAGGAGCTGATGTATCAACTTCAAGTAACATCGAGGAGTCTGTAAATTACACTGATGGGGAAAGCCTCAAACTTCGATCTCTTCGAGTTAACGTAGGACAGCTCCTGGCCATGATTGTACCTGATCTCGATCTTCAGCAAGTGAATTACGATGTTGATGTAGTTGATGAGATCTTAGGACAAGTTGTGGAACAAATGAGTGAAATCAGTAGTACTTAAAGTGTATTTGAGATAATGAAAAATATTTGCTCAGTCTTCGGGTTGTACAGCTTTCAAAATGTAAACAATTTTGTTATAAGTATGATAGGTAACAGACTGAAGAACCATATTCTTTGCTGTATTCTATGCATTCAAGTGTGGACACAAATACTGTGTACACATTATCACACCTTTTGAAATGCCTGTGAATCATTGATATTGAGCAGCTACACAGCTAACTCATGATTCTGCTTTGAAATGTAAATACTTATAATTAAGTCTGCACATATTTTTTTAATCACCCTAATGGACTCAAGTGTTTTTCACCAAGAGGTTTTCAGGTTGCCCCTAACCTTTGTGCAATCTTTTCTGGTTCCCTAAAGTGTATTTTTCTCTGACTTGGGGGCTGTGCCATAATACAAATGGAAATGTTACCTTTGATTTTCTTACAGAAAAGTTTAAAACAGGGTTTTTTAAAATGGAATAACATTCCTGATAAGTTTGAAGTGAATTGAGCATTAATGTTTCTTTTTTTATAAATTCTTATTTCCTGAAGTATTTTATTCATGAAAAGAAAGTAAAGCAGAAACTCCATTTTTGCTGGGATGTTTTGTGTGTTGAGATTGCCAATCATGATCAAACGCAAAGTGTTTTTTACAGAAAAAAGCAACGATTTTTAGTATAAAAGTATCAAAAATATTAAACGTCCCACCACATTTACCTTGAAGCCCATTTTTGGCTGCTTAGTTCGCATGGAGTGGGCACAATAATTGTTTAATATTTCTTTTTGTGAAATTTCCTGTACAGCCTTTTGTAGAATTACTACAGGTTAATATGAGTTGAGGAAGACAATCTTTCTCCAGCAGTACTGCATACTTTTTATTATATTGCAAACCTAAGTGTTTTGTATCCTGGAGTTAAGCAGCAAACAACCTAGGATTATAGTATTACATGCCCTAAAAATTATGCTTTATTGGTCCCATGTTTTGTGCAATTATAAAGAGATGGCTTTCTATTAAGTATAACTGTGTATATAATTAAGAATCGTATTTTCCACAACTAAAATGTGCATTATTTTTTTCAAAGTTTTATCATTGCTATTTATTTTTACTTTTGTTTCTGAACATTGAATACATGTTCCTTTTATATGCTTAATTACATGTCTGTCAGGTACAATGTTAAATTTTTATTGTACATTAACTTCTAGAAAAAGCAAATAAGTGAAATTTTATTTGCTTGATAAGGTAATTGAAAGTGTATTTTTGGTATGAAGCTGGTTTTCTGTCACAATTGTATCTCCTCAGAATTTAAAAATCTTGTAATAAAATAAAAATATATATGATGGCTAACATTTCAGATATTACTTTTAAGGAATTCTATATTCAAGTTATATTTTGAAAACTAAGATTGTGTCTGTTAAGACCCTCAAGTTGAGCTCATTATATTCATTAGAAGTTACATTTAGAAGACTAATACTGTTTGTTTCCATTAAGATGCTCAGACTGGGCTCACCTTGAGAGTGTGTGTGTGCATTTTACACTGAAAAAGAAACTTTCTTTGTATAAATCATTTTAAAAAACCTTGCCTAAATGAGAGCAGCTGTGTATAGCATGTCTAAGTTTGTGAATATTTATGTAGCACTTATTTCTGGAATTTGCAATTTTCCCTTTCCTTTTGGTCAGCTATATTCTTGCAGAAATCCATATTATATGGCTGTTAACTGGCTTAATGGGAAAATTAATCATAGAATTAGTAAGAGAAACTTGCTTGCTAAGTTGATTCTTTGACTATATTTAACCTAATATTCACTCTTTAAGAAAATATTGCCAAGATAAGACTGAAAATGTGGCTAGCAGATTTAAGAGAACAACATGGACCCACATCGCATATATTGAGGTACCTCTACTTCTTTTTTGTTGTTGTTAAATTTTTTAAAAGGCTAGTGTGGGAGGAGTGTGCCGCTTAAACCACTTGTTTAAAGCTTTAAAACAAAAACAGTATGAGGACGTAAACTAGAATTGCCCACAGTCCCTACAGACAAGACCTCAACAGAGACTACAGACTCAGCGAACGCTAAATGTTCTCACAGCACGGCCAGTGTGGCACATCGCTGTTGCCTTTATTGGCCTCAATTCCTACTGTGAGCAGGAGGCGCTGGTGACTGCCCACAGTCTCCGACACTTGACTTGTGCTATTGCACGACCCATTAGGTCATTATTTGACATGGAGGAATAATCAAAGGTGATACGTACTGGTGGTTCTCCACTGGCTGCATTTTAGAATCACTTGTGGGGTTCTTAGGAATCCCAGTGTGAGGATGCTCCCCGTACTATAAGAGTTTTGAGGGTTGAACCAATTGTCAAGACTTTTTTTAAGGCCTCCCAGTGCACTATCAGAGCCAAGAGCCATTGAGCTACACCCTCTAGTGATGAGTGTGAGTGTTGAAGTCAGGTGGTTCCTGAAACCAACCCAGAATCTGCATGGCCACTTTCTCACTGCGGTACAAGGTCAGGGAAAGGGAAGCAGAGCTGGTGCCCAAGTTAGAAATATAAATAACAACAGAATGGTATACTGTGAAAAGACTTCCCCACTGCCTCCCTGCAGGTGACCAGTATTTTTTTGTATGTCCTTCCAGAAAATATTAGCTGCATACATATACACATTCATATATATGCATTCAGTTTCTATTAAATTTTATATCTTTATATTTGATTATATATTTGTATCAAATCTACACAGGTATTATACCATGTAATTGGTAACATTTCCATATTACTCTTTGAACAGCTTTAGTAGCATTTTAAAATGACATGAATACGCTCCCAGTGTTCCTTTTCTTTCTTTCTGGAAAAAACACTACTGTGAAAATAAATACCCACCACACATACTTTTTCAGGGGTATCCAGAATGTAAATTCCTTGTCATGAATACTGATTGGTCAAAGAGTATATGGTATGTTAATTTTAATAAATGTTGCCATCCAGAAATCGTTGTACTTAAACTCCTATGAAAAATAAATGTACGAGTGTGTTTCCTCCTATCTCCATCAAACTTACTAATAGTATGTTGGAAAATGGCAGCTTGCATTTCTTTGTCCCAGGTTGAACATGTTTTCATGTTTTATTGGCCACTTTAATTCCTTTTTCTGTGTTCTCCATCATAACTCTCTGCCACCTCTTTTGGATTCTTCGGTTTATTTTTTTAAAGAAGCTGAGTGTCTGTTAATGTGGCCACAAATGGCTCCAAGCTTTCAGAAAACCTACTGTTGGTTAAATCTTACTTTGCACGGTGTTACACAGATTCATTGGGATGGAATGAGAGACTCACTGGAGTCGTGTTTTTCTGGCCCTTGAATAGCATGTGGCCTTAT EMBV3_42583 TACTTTCCAGACAATCGTGTCAAAATTTAGTTACACTGGTAATCCAGCAACCTACTGATG Gene GeneID:528478|PRKCI:XM_002684926:67_cdna Constitutive 0 NULL GeneID:528478 1 GENE PRKCI NULL protein kinase C, iota EMBV3_09206 GAAAAAAAAAAGGCTTAAAGGCATTTCATTCAGATCAAAAGCTGTGTCAGACACAAAACT Gene GeneID:516106|TSHZ1:XM_002697657:67_cdna Constitutive 1 NULL GeneID:516106 24 GENE TSHZ1 NULL teashirt zinc finger homeobox 1 EMBV3_19990 CGGATTCTCTACCACTGGACCACCAGGGAAGCAAGCCCCTCGACAGTTAATTTGGTGTAA Gene BVV0102_200890 + 0 NULL GK000011.2:9157727-9193843 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16522 AGCATGAGCCTTGTCCCTGTAGTCAGTAGGGGGCAATCTTGCTTTTATTCATCCTCCATC Gene GeneID:541196|LOC541196:XM_002689268:15_cdna Constitutive 0 NULL GeneID:541196 7 GENE LOC541196 NULL hypothetical LOC541196 EMBV3_28290 GGTCCTCTTTTCAGGGTGTAAGAACAGGAAGACACCATCACAGACTCAGACAGAGTATCT Gene BVT0102_337814 + 0 NULL GK000001.2:81286777-81530632 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25381 TTGCCGGGGTGGTTTGTTCCGAGGAGTACAGAATAAATAGTCCGGTCAAAACGCGCGGTG Gene GeneID:507407|MSC:XM_002692700:101_cdna Constitutive 0 NULL GeneID:507407 14 GENE MSC NULL musculin (activated B-cell factor-1) EMBV3_11079 TCGTGAACTTACTTAAAGAGGAACTGAAGATGCTCATGCTGGTGCAGGTGGCCCTCGAGT Gene GeneID:540254|DGCR8:NM_001101204:97_cdna Constitutive 0 NULL GeneID:540254 17 GENE DGCR8 NULL DiGeorge syndrome critical region gene 8 EMBV3_31954 GCACTCGGAGTCCATTACTGACCCAACTCTGGGCAACAGCCATTCTCGGATCCCTCTCAG Gene GeneID:510681|BSPRY:XM_002689938:95_cdna UTR3_Alt 2 NULL GeneID:510681 8 GENE BSPRY NULL B-box and SPRY domain containing EMBV3_20288 ATTCTTTGCTAGGCTATTTCTGCTCAGTCGGGCTCCCTCCAGACTTTTTCCGTGTTCACG Gene BVT0102_015852 - 0 NULL GK000024.2:2659890-2858678 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09599 CCAGGCTGCCGTGATCCAGCTCTGTCGTGGTGCTGTGTATATTGTTCCTAAGTTGGTCTT Gene GeneID:533917|GSTA4:NM_001015651:311_cdna Constitutive 1 NULL GeneID:533917 23 GENE GSTA4 MGC134107 glutathione S-transferase alpha 4 EMBV3_25570 TCTTCCAGTATGAATCCCACAGAAGCCAAGGCTGTAAAAACAGAACCTGAGAAGAAGCCA Variant GeneID:281039|CAST:NM_174003:8_cdna 354^419 1 EMBV3_43706 GeneID:281039 7 GENE CAST NULL calpastatin EMBV3_32415 TGCTCTACCTGGCGGTTGTATCTCGGCGGGTTTGCTTTCTGCTAGTTTCTCTCACATACC Gene GeneID:522150|LOC522150:XM_002693664:280_cdna Constitutive 0 NULL GeneID:522150 15 GENE LOC522150 NULL similar to Olfactory receptor 8J3 EMBV3_01564 GGAAACAGAGTTTGTCCCCATTTGTCTTGTTCCCTCTGAACCTCCAGGGTCCTCACAGTG Gene BVV0102_049420 + 0 NULL GK000011.2:94418836-94501987 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01964 TATGTCTACCAGTGACCTACAAGCCCACCCTGTGTGTGACTCCTTCTTGCCAGTCCTCTG Gene GeneID:783717|KRTAP12-2:NM_001080351:65_cdna Constitutive 0 NULL GeneID:783717 1 GENE KRTAP12-2 MGC155077 keratin associated protein 12-2 EMBV3_07645 GCGTATGCAGTACTTTGTAGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCCTACGACGT Gene GeneID:784876|KCNQ1:XM_002699445:156_cdna Constitutive 0 NULL GeneID:784876 29 GENE KCNQ1 NULL potassium voltage-gated channel, KQT-like subfamily, member 1 EMBV3_01247 CTTCATTTGCATATGGAAAGGAAGGCTATGATAAGTCATTACCTGAAAAAGGAATTTGAA Variant GeneID:509422|FKBP7:NM_001100330:17_cdna 443^576 1 EMBV3_08562 GeneID:509422 2 GENE FKBP7 NULL FK506 binding protein 7 EMBV3_24689 TCAAGACCATCCCCCTGGGAAAGAAATGCAAAAAAAGCAAAATGGCTGTCTGGGGAGGCC Gene BVT0102_029183 + 1 EMBV3_29805 GK000029.2:5133431-5175375 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00109111 TCONS_00190179 TCONS_00238479 TCONS_00117548 TCONS_00197427 TCONS_00070849 TCONS_00229757 7 XLOC_065016 XLOC_116214 XLOC_145146 XLOC_071714 XLOC_119088 XLOC_042626 XLOC_139251 NonCoding TCONS_00190179 XLOC_116214 NonCoding NonCoding - 4:110124800-110126425 - TSS142547 1625 2 TCONS_00190179_2 68 0.998153846153846 1 0 0.000176126488718107 0.000166958588106425 0.000132751417044468 0.000143597506633198 0.000168731475196512 1.65094720792956e-05 0.000126981187526864 0.000280266835038769 4.7745515915013e-05 6.32998664807979e-06 0 0 5.29711983524711e-06 8.04101816862515e-07 0.000116700615890568 0 0 2.57342546113627e-06 6.17802334814661e-05 8.40844382806031e-05 8.21982259472146e-05 0 1.12911389385734e-06 5.15836228231951e-06 0.000134737192322579 7.87648073169611e-05 2.97463828503284e-05 0 2.48953951242049e-07 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1103 91.65 0.473846153846154 0 noncoding ATTTCTCCCAGCAATCTTGATTCCAGCTTGTGCTTCTTCCAGCCCAGCATTTCTCATGATGTACTCTGCATATAAGTTAAATAAGTAGGATGACAATATGCAGCCTTGACGTACTCCTTTTCCTATTTGGAACTAGTCTGTTGTTCCATGTCGTTATAACTGTTGCTTCCTGACCTGTATACAGGTTTTTCAAGAGGCAGGTCAGGTGGTCTGGCATTCCCATCTCTTTCAGAATTTTCCACAGCTTATTGTGATCCACACAGTCAAAGGCTTTAGCATAATCAATAAAGCAGAAATAGATGTTTTTCTGGAACTCTTGCTTTTTTGATAATCCAGTAGATGTTCACAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAAACCAGCTTGAACATCTGGAAGTTCATGGTTCACGTATTGCTGAAGTCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCATGTGAGATGAGTGCAACTGTGTGGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGAGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAATGCAGCACTTTCACAGCATCATCTTTCAGGATTTGAAATAGTTCAACTGGAATTCCATCACCTCCACTAGCTCTGTTCGTAGTGATGGCTTCTAAGGCCCACTTGACTTCACATTCCAGGATATCTGGCTCTAGGTGAGTGATCACACCATCATGATTATCTGGGTCATGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTTTCCTTTATAGAGCCCATCTTTGCATGAAATGTTCCCTTGCTATCTCTAATTTTCTTGAAGAGCTTTCTAGTCTTTCTCATTCTGTTGTTTTCATCTATTTCTTTGCATTGATCGCTGTGGAAAGCTTTCTTATCTCTCCTTGCTATTCTTTGGAACTCTGCATTCAGATGTTTATATCTTTCCTTTTCTCCTTTGCTTTTCGCTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTCCTCAGACAGCCATTTTGCTTTTTTTGCATTTCTTTTCCATGGGGATGGTCTTGATCCCTGTCTCCTGTACAATGTCACGAACCTCAGTCCATAGTGCATCAGGCACTCTATCTATCAGATCTAGTCCCTTAAATTTATTTCTCACTTCCACTGTATAATCATAAGGGATTTGATCTAGGTCATACCTGAATGGTCTAGTGGTTTTCCCTACTTTCTTCAATTTCAGTCTGAATTTGGCAATAAGGAGTTCATGATCTGAGCCACAGTAAGCTCCTAGTCTTGTTTTTGTTGATTGTATAAAGCTTCTCCATCTTTGGCTGCAAAGAATATAATCAATCTGATTTCGGTGTTGACCATCTGGTGATGTCCATGTGTAGACTCTTCTCTTGTGTTGTTGGAAGAGGGTGTTTGCTGTGACCAGTGCATTTTCTTGGCAAAACTCTGTTAGTCTTTGCCCTGCTTCATTCTGTATTCCAAGACCAAATTTGCCTGTTACTCCAGGTGTTCTTGACTTCCTACTTTTGCATTCCAGTCCCCTAT TCONS_00182808 TCONS_00182809 TCONS_00182810 . 5' 770975 TCONS_00182808 TCONS_00182809 TCONS_00182810 . 5' 770975 EMBV3_19122 GGAGTGGAGTGAAGGGTGTGTTCTGCGCAGGAGGGACTCAGAGGCTGCCTCGATGCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36786 TTGGGCATCTGGAAGATAGACCCCGACGTATTCCGGAGCAGCATCGCCTGGCGCAATCCT Gene GeneID:100336874|LOC100336874:XM_002699492:45_cdna Constitutive 0 NULL GeneID:100336874 X GENE LOC100336874 NULL CG3313-like EMBV3_27875 CACCGGTTCCTCCCATTGGGCACTTCGTGAATATCCAGCCAGCGTGACGACACAACCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11994 GGAGCAGGCTATAAGCCGCAGATGCACCTCCCCGTTACTTCCACTGTAGACGATCTGGAT Gene GeneID:539504|LIFR:XM_002696369:69_cdna Constitutive 0 NULL GeneID:539504 20 GENE LIFR NULL leukemia inhibitory factor receptor alpha EMBV3_39393 AGAAACAGTGGCAGCTGGACCAAGAGCTGCGAACCTACATGAACCGGGAAGAAACCCTAA Gene GeneID:508306|MICAL1:NM_001081582:11_cdna Constitutive 0 NULL GeneID:508306 9 GENE MICAL1 MGC143300 microtubule associated monoxygenase, calponin and LIM domain containing 1 EMBV3_31610 AGGTTGCACAAGAACTTTTACTCTCTTGTAATTGTGCCTCAGACTTCTTGAAAGTCCACC Gene GeneID:508905|ZRANB2:NM_001105346:31_cdna UTR3_Alt 2 NULL GeneID:508905 3 GENE ZRANB2 NULL zinc finger, RAN-binding domain containing 2 EMBV3_29555 GTTTTTCTGGCCTTGTCCCTCCTGTGGCAGGCACCCCACAGCTGGATCCTTCATTCGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27985 AGGCCGCTGCGTCAACACTATCGGCTCTTATCACTGCACGTGCGAGCCCCCACTTGTGCT Gene BVT0102_369714 + 0 NULL GK000018.2:50168487-50226763 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083790 1 XLOC_051346 Coding TCONS_00083790 XLOC_051346 Coding Coding LOC100848191 18:50173267-50202362 = TSS62872 4902 1 TCONS_00083790_11 1547 31 0.832577163676359 9.8758979125837e-15 0 3.96437782034515e-05 2.20223657258336e-05 5.74090215408969e-05 1.45943004524375e-06 8.32761768780978e-06 9.65274240085882e-06 0 4.15477985361876e-05 6.5378774445856e-06 1.45886667970595e-06 9.36526226885813e-06 1.83003215462924e-05 2.1744508381828e-05 7.00430119721345e-05 0 0 5.99771559925712e-05 3.08079189673332e-05 5.44970024673411e-05 1.66518525068819e-05 4.86586921130009e-05 0 6.64296112403705e-05 0.000142289162550966 8.36679994310665e-06 2.21050245581814e-06 9.90333828243982e-07 0 XM_003587266.2 LTBP4 PREDICTED: Bos taurus latent transforming growth factor beta binding protein 4 (LTBP4), mRNA. 0.0 6762 100.00 0.764585883312934 NM_001042544.1 LTBP4 Homo sapiens latent transforming growth factor beta binding protein 4 (LTBP4), transcript variant 1, mRNA. 0.0 4956 89.24 0.76438188494492 TCONS_00083790_11 sp|Q8N2S1|LTBP4_HUMAN LTBP4_HUMAN Latent-transforming growth factor beta-binding protein 4; 0.0 2492 86.96 0.999353587588882 0 coding 0 0 0 0 -0.00805254328270221 0.960810739126838 -0.0237543940310599 0.651626086647498 ATGCGGCTGCCTGGCCCCAGCGGCCGCCGCCCCCTCCTGCTGGTGCTGCTGCTGCCGCTCCTTGCAGCCGCCGCCACTGCCGCCTCCGCCGCCGGCCCCAGCACCAGCCAGGCCGTCGAGGTCGCGGCGATCCCGGGCCGTCCGGCCGGTGCTCCTGCTTGTCGCTGCTGTCCAAGCCGATCGCCCAGGAGAAGCCGCTGCTTTAGAGCCTCCTGCAGGGTCCGGAGCTGCCGGCCCGAAAAGTGTGCAGGCCTTCAGCGTTGCCTGGCTCCAGGGCCCCCAGAGCTGCAGAGCGCCAGCCCCAGCGTGAGGAAGAGACAGGTGTCCCTTAACTGGCAGCCACTGACGCTGCAGGAAGCCCGAGCCCTGCTGAGGCGACGGCGGCCCCGCGGGCCGGGGGCCCGGGCATTGCTGAGAAGGAGGCCCCCACAGCGCGCCCCTGCCGGCCAGTCCCGGGTCCTGTGTCCCTTGATCTGTCACAATGGAGGAGTGTGCGTGAAGCCTGATCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGTTCTGCCAGTTGCATTCATCGGGCGCCCGGCCCCCGGCCCCGGCCATGCCAGGCTTCACCCGCTCTGTGTACACCATGCCGCTGGCCAACCACCGCGATGATGAACATGGTGTGGCGTCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTAGTGGTGCACCAGGTGGAGCGTGTGTCCGGCCCTTGGGAGGAGGCGGATGCCGAGGCAGTGGCGCGGGCAGAGGCGGCGGCACGGTCGGAGGCGGCAGCGCCCTACACAGTGCTGGCACAGAGCGCGCCGCGCGAGGACGGCTACTCGGACGCCTCGGGCTTCGGTTACTGCTTTCGGGAGCTGCGCGGAGGCGAATGTGCGTCCCCGCTGCCCGGGCTCCGGACGCAGGAGGTGTGCTGCCGAGGGGCTGGCTTGGCCTGGGGCGTTCACGACTGTCAGTCGTGCTCGGAGCTCCTGGGTAACACCCACCAGGGGGGCGCCCCAGATGGGCCGTGTCCAACTGGCTTTGAAAGGGTTAATGGGTCCTGCGAAGATGTGGATGAGTGCGCGACTCGAGGGCGCTGCCAGCACGGAGAGTGTGCAAACACGCATGGCGGGTACACTTGCGTTTGCCCCGACGGCTTTCTGCTCGACTCGTCCCGCAGCAGCTGCATCTCCCAACACGTGATCTCAGAGGCCAAGGGGCCGTGCTTCCGCGTGCTTCGAGATGGCGGCTGCTCACTGCCCATTCTACGCAACATCACCAAACAGATCTGCTGCTGCAGCCGTGTGGGCAAAGCCTGGGGCCGGGGTTGCCAGCTTTGCCCACCCTTCGGTTCAGAGGGTTTTCGGGAGATCTGCCCAGCCGGCCCTGGCTACCATTACTCGGCCTCCGACCTCCGCTACAACACCAGACCCCTAGGCCAGGAACCACCCCGAGTGTCCCTCAGCCAGCCCCGTGCCCCACCTTCCACCTCTCGACCACCCTCAGGCTTTCTGCCCACTCATCGCCCAGAACCTCGGCCTGAGCCCCGGCCAGGCCCTGAGCTTCCCCTGCCTAGCATCCCTGCCTGGACTGGTCCTGGGATCCCTGAATCAGGTCCCTCTGCAGGCGAGTGTCAACGCAATCCCCAGGTCTGCGGCCGTGGACGGTGCATCCCTCGGCCCAGTGGCTACACCTGCGCTTGCGACTCCGGTTTCCGGCTCAGTCCGCAGGGCACACACTGCATCGACGTGGACGAATGTCGCCGCGTTCCCACTCCTTGTGCTCCCGGACGCTGCGAAAACACGCCAGGCAGCTTCCGTTGCGTGTGCGGGCCGGGCTTCCGAGCCGGCCCGCGGGGTACGGAGTGTCTGGACGTGGACGAGTGCCACCGCGTGCCGCCACCTTGTGACCGTGGGCGCTGCGAGAACACGCCAGGCAGCTTCCTGTGCGTGTGCCCCGCGGGGTACCAGGCTGCACCCCACGGAGCCAGCTGCCAGGATGTAGATGAATGTATCCAGAGCCCAGGCCTGTGTGGCCGAGGGGTCTGTGAGAACCTGCCTGGCTCTTTCCGCTGTGTGTGCCCGGCTGGCTTCCGGGGCTCTGCGTGTGAAGAAGACGTGGATGAATGCGCCCAGGAGCCACCACCCTGTGGGCCTGGCCGCTGTGACAACACAGTGGGCTCCTTTCACTGTGCCTGCCCTGCTGGCTTCCGCTCCCGAGGGCCTGGGGCGCCCTGCCAAGATGTGGATGAGTGTGCCCGTAGCCCCCCGCCCTGCGCCTATGGCCGGTGTGAGAACACGGAAGGTGGCTTCCAGTGCGTCTGCCCCACAGGCTTCCAGCCCAATGCTGCCGGCTCCGAGTGCGAGGATGTAGACGAGTGTGAGAACCACCTGGCATGTCCTGGGCAGGAGTGTGTGAACTCACCTGGATCCTTCCAGTGCAGGGCCTGTCCTGCTGGTCACCACCTGCACCATGGCCGATGTACTGATGTGGACGAATGCAGTTCGGGCGCCTCCTGCGGCCCCCATGGCCATTGCACTAACACCGAAGGCTCCTTCCACTGCAGCTGCGAGCCAGGCTACCGGGCGCCAGTTGGTCGGCCCGGGCCCTGCGCAGACGTGAACGAGTGCCTGGAGGGCGACTTTTGCTTCCCCCACGGCGAATGCCTCAACACCGACGGCTCCTTCGCCTGTACTTGTGCCCCCGGCTACCGGCCCGGACCCCGCGGAGCCTCTTGCCTCGACGTGGACGAATGCAGCGAGGAGGACCTCTGCCAGAGCGGCATCTGTACCAACACCGACGGCTCTTTCGAGTGCATCTGTCCTCCGGGACACCGCGCCGGCCCAGACCTCGCCTCCTGTCTCGACATTGACGAATGTCGGGAGCGGGGCCCTGCCTTGTGCGGGTCCCAGCGTTGTGAAAATTCCCCGGGCTCCTACCGCTGTGTCCGAGACTGCGACCCCGGCTACCACGCAGGCCCCGAGGGCACCTGTGACGACATAGATGAGTGCCAGGAATACGGCCCAGCGATTTGTGGAGCCCAGCGCTGTGAGAATACCCCTGGCTCCTACCGCTGCACGCCAGCCTGTGACCCTGGCTACCAGCCCACGCCAGGGGGCGGATGCCAGGATGTGGACGAATGCCGGAACCGGTCCTTCTGTGGGGCCCACGCCGTGTGCCAGAACCTGCCTGGCTCCTTCCAGTGCCTCTGTGACCAGGGCTACGAGGGGGCGCGGGACGGGCGTCACTGCGTGGATGTGAATGAATGTGAGACACTACAGGGCGTGTGTGGAGCTGCCCTGTGTGAGAATGTGGAAGGCTCCTTCCTCTGTGTCTGCCCCAACAGCCCTGAGGAGTTTGACCCTATGACCGGGCGCTGTGTTTCCCCTCGGACCTCTGCTGGTACATTCCCAGGCGCACAGCCCCACGCACCTGCCAGCCCCAGTCTGCCAGCCAGACCCCCGCCCCCACCCCCGCCCCGCCGGCCCAGCCCACCCAGGCAGGGCCCTGTGAGCAGCGGGCGCCGAGAGTGCTACTTTGACACCGCGGCTCCGGATGCCTGTGACAACATCCTGGCCCGGAACGTGACGTGGCAGGAGTGCTGCTGCACTGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGAGCACCGAGACAGCTGAGTACCAGTCATTGTGCCCCCATGGCCGGGGCTACCTGGCGCCCAGCGGAGATCTGAGTCTCAGGAGAGGAGGCTACTTCATTAATCACTCCCTCCATGCCTCCCTAGATAATGACGAGTGCGCGGACGAGGAGCCAGCTTGTGAGGGAGGCCGCTGCGTCAACACTATCGGCTCTTATCACTGCACGTGCGAGCCCCCACTTGTGCTGGACGGCTCGCGGCGCCGCTGCGTCTCTAACGAGAGCCAGAGCCTTGATGACAATCTGGGAGTGTGCTGGCAGGAAGTGGGGGCTGACCTCGTGTGCAGTCGCCCTCGGCTGGATCGCCAGGCCACCTACACAGAATGCTGCTGCCTCTATGGCGAGGCCTGGGGCATGGACTGTGCCCTCTGCCCCGCACAGGACTCAGATGACTTTGAAGCCCTGTGCAACGTGCTGCGCCCCCCTGCATATGGACCCCCACGGCCAGGTGGCTTTGGACTCCCCTACGAGTATGGCCCAGACCTAGGTCCACCTTACCAGGGCCTTCCCTATGGGCCTGAGTTGTACCCACCACCCGTCCTACCGTATGACCCCTACCCACCGCCACCTGGGCCCTTCGCCCGACGGGAGGCCCCCTACGGGACGCCACCCTTCGACATGCCGGACTTTGAGGACGATGGTGGCCCCTACGGTGAATCTGAGGCTCCTGCTCCATCCGGCCCGGGCACCCGCTGGCGCTACCGGTCCCGTGACACCCGTGGCTCCTTCCCAGAGCCTGAGGAGTCACCTGAAGGTGGAAGCTATCACTCCTGGTATCTCCTCTCCCCAGACATCAACGAGTGTGACGAGGCCGAGGCGGCCGCCCCGCTCTGTGTCAACGCGCGCTGCGTCAACACTGATGGCTCGTTCCGCTGTATCTGCCGCCCAGGATTCGCACCCTCACACGAGCCGCATCACTGCACGCCCGCCAGACCCCGGGCCTGAGTCCCCAGCAGCCCTGGGCCGCCCACTCCGCGCCTGCGCACGCGGGGTCCCTGCTGCGCAACCCTGCCACCCACCCGCTTGCGCGCATGCGCACAGCGATGCCGCACCCGGCGGAAAGGAGGGTCAGTGGGACAGATGGACAGAAGGAGCAGCCTTCTTACCGACGTCGCGGGCCCAGGCTTAGCCCACGGTCCCCTTCACATTCCTGCTCCTTTTTATAAAAATGTTCAATTAAAAAACACCTATTTTGTACCTTCC EMBV3_22951 GGCTGGGGTGCTGCGTAGTCAGTGTTTGACTTTCTTTTCAAGTTGGGGCAGAAGGAGAGA Gene GeneID:514928|KIF1C:XM_002695771:258_cdna Constitutive 0 NULL GeneID:514928 19 GENE KIF1C NULL kinesin family member 1C EMBV3_21793 GTAAGCTATTTAGCAAAAGACCCATTCTTGGTAGCTTTTTTTAATGTTTATAGGGATAAG Gene GeneID:532603|LOC532603:NM_001110080:57_cdna Constitutive 2 NULL GeneID:532603 26 GENE LOC532603 MGC140222 hypothetical protein LOC532603 EMBV3_04298 GAAGAGGTGGGCGTGCCTGAGACGGAGCAGAATGACATGGCTGAAGGGATGGCGCACGGT Gene GeneID:531152|LOC531152:XR_082709:306_cdna Constitutive 0 NULL GeneID:531152 17 GENE LOC531152 NULL similar to solute carrier family 5 (sodium/glucose cotransporter), member 1 EMBV3_28694 GTGTACCGAATCTTGTGCATCTTACCACGCTGCTGAACGCAGACTGAAACACGACATCTG Gene GeneID:525116|RUNDC3B:NM_001076874:26_cdna UTR3_Alt 4 NULL GeneID:525116 4 GENE RUNDC3B MGC139450 RUN domain containing 3B EMBV3_17425 TCAGTGACTCAAAGATGCTGGGGACTCGGTTCCTAACTCCAAGACACTTCCACTCGGGCA Gene BVT0101_074528 + 1 EMBV3_05462 GK000016.2:49285533-49293729 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31137 TTAAGTAGTAACTTCACAAAGCTGTTAGTACTCATCAATCAGCCTTGTATGATCCACCCC Gene BVV0102_425017 + 1 EMBV3_33388 GK000010.2:67749362-67756280 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014438 1 XLOC_008306 Coding TCONS_00014438 XLOC_008306 Coding Coding SOCS4 10:67735113-67753818 = TSS10430 6992 1 TCONS_00014438_4 440 0.0188787185354691 2 0.626283147989735 0.000132120036526736 0.000188884067142425 0.000116765929076244 0.000145553125857685 6.82472295318529e-05 4.64582663010761e-05 0.000121359884153547 0.000248089162138193 0.000594593599503432 0.000313583207802388 0.000103732220150745 0.000233063815838538 6.20747204923996e-05 0.000159826357296861 3.82004272797563e-05 0.00161659535151774 0.00148387890755918 0.0020555182379349 0.000189067941686668 0.0002437211615015 4.85792374207285e-05 0.000538231641375133 0.000537974851514106 0.000908520984449049 0.000203989359087864 0.000165411899146446 0.000373665760298592 0.000132886987470444 0.000169460971373973 6.70656291913243e-05 NM_001076218.2 SOCS4 Bos taurus suppressor of cytokine signaling 4 (SOCS4), mRNA. 0.0 3997 100.00 0.31679061784897 NM_080867.2 SOCS4 Homo sapiens suppressor of cytokine signaling 4 (SOCS4), transcript 0.0 5481 83.16 0.75100114416476 TCONS_00014438_4 sp|Q0VC91|SOCS4_BOVIN SOCS4_BOVIN Suppressor of cytokine signaling 4; 0.0 914 100.00 0.997727272727273 3 noncoding 0 0 0 0 -0.00138093033870268 0.9956141557672 -0.0216448794457679 0.685902849411059 ACCCCCACCCGAGGGGCGCAAATAGGATATAGCGAAGGGTCCGTCCGACATAGGCAGGAAGAGAACACGCTTGTCTTCGATGGGCCGCACGGACGAGGCCAGCGAGGGGAGACTCACCTAGAGGACCGAACCTCCACAGCCGAGGAAAGGGACGGGGGAGTGAGCGCCGGCGCCGGCGCTTCCCGCGCTCGGCGTGGTCCCACACTGCGCCTGCGCTGGCCCGCCCACTCCCAGCGCGGTCCAGACCCGGGACGCCGGGCGGTGGCGTCAGCGGCGCGCACGCCGCTCGGGAAAAAGCCGGTTGCTGGGGGAGTGAGGAAGAAAGGGAGGGAGCCGAACACGGAAGTGGTGGCAGTGCCGGCGGAGCAGGTGGAGGCGGTGAGTGCGATGTCTGCGATGAGAACCCGGCACCTCAGGATGGGGGCTTGCAGACCGACAATCGCCTCGTAGGACTTACATGAGGTGCCAGAGTGGCTGGGCCTCCCTTCTCCACCTCAGCGAATACCCAGAGTGATGGCGGTGGTGATGGCGGCAGTTACAAGGATAGCCCCTGTTAAACTGCGTTCCGAGAGATACATCCAGAAAGTACCCAGAAGAAATATTCTACTGGAAAAATTGAAAAAGCATTATTTATAACACTGGAATTTGTGGACAGTTTGTTAAAATGGCAGAAAATAGTGAAAGTAATAGTAAAAATGTAGATGTAAGGCCCAAAACTAGCCGGAGTCGAAGTGCTGACAGAAAGGATGGTTATGTGTGGAGTGGAAAGAAGTTATCTTGGTCAAAAAAGAGTGAAAGTTGTTCAGATGCTGAAACAGTGAGTGCTATCGAGAAAACTGAAGTTCCTTTAAGGAGCCAAGAAAGGAAGCACAGCTGTTCATCTATCGAGTTGGATTTAGATCATTCCTGTGGGCATAGATTTTTAGGCCGATCTCTTAAACAGAAACTGCAAGATGCTGTGGGGCAGTGTTTTCCAATAAAGAATTGTAGTAGTCGGCATTCTTCAGGGCTTCCATCTAAAAGAAAAATTCATATCAGTGAACTCATGTTAGATAAGTGTCCGTTCCCACCTCGATCAGATTTAGCCTTTAGGTGGCACTTTATTAAACGACACACTGCTCCTATAAGTCCCAAATCAGATGAATGGGTAAGCACAGACTTGTCTCAGAGCGAATTGAGGGATGGTCAGCTAAAACAACGAAGAAACATGGAAGAGGTCAGCTGCTTCTCACATACCAGTGTTCAGCCCTGTGTCATAACCAGTAACAATTCTTCGGGTAGAGGTGGTCCTGGGACTGACTCTATAGTGAACCTGGCTTCAAATAACAGCATAGAAGATAGTGACATGGATTCAGATGATGAAATTATAACACTTTGCACAAGTTCCCGGAAAAGAAACAAACCCAAATGGGAAATTGATGAAGAAATCCTGCAACTGGAAACACCTCCCAAGTACCATACTCAGATTGATTATGTCCACTGTCTTGTACCAGACCTCCTTCAGATCAATAATAATCCATGTTACTGGGGTGTTATGGATAAATATGCAGCTGAAGCTCTACTAGAAGGAAAACCAGAAGGCACCTTTTTACTGCGAGATTCAGCACAGGAAGACTATTTATTCTCTGTTAGTTTTAGACGCTATAGTCGTTCTCTTCACGCTAGAATTGAACAGTGGAATCACAACTTTAGCTTTGATGCACATGATCCTTGTGTCTTCCATTCGCCTGACATTACTGGGCTCCTAGAGCATTACAAGGACCCGAGTGCCTGTATGTTCTTCGAACCACTTTTATCCACTCCTTTAATTCGGACTTTCCCCTTTTCCCTGCAGCATATATGCAGAACAGTTATTTGTAACTGTACAACTTACGATGGCATTGATGCCCTTCCAATTCCTTCTTCCATGAAATTATATCTGAAGGAATATCACTATAAATCAAAAGTTAGAGTACTCAGGATTGATGCACCAGAACAACAATGCTAGAAAAAGGGTAGGAACAAGGGAGTGGTTATATATGTATTTTCATTTAATACTTTATTTTTCTTATTATACCACTTTGAATTTTTCTACAAGGGCAGTTGAAGTCCAAAATAAACTTCTGCCCTAAATTTTACTTGCAGATCAGTTTATTTTTATTAGGATACAGTAATTGTTGAACAATAATAATGGTTACACACTAGGGGTTAATGGATATTTTTGACCAGGTTTGGTTTTTGTTTTTACCATGTAGATTGTATACTTAATTTTTTTCTTTTCTTAATTGTAACTTAAATATGATCCAGGGATATTTGAAGTTTGTAGGCATTGCAAACACATTTAAATAATCTGTATTTCATACTTTTCTTTAAAAATAATTGTTTCTTTTCCTATATATAACATATAAAACGCTTTGTTAACCTATGTCATTGGCATTCCTAACATAAGATATAGTTTCCACATCATCCTTTCATTTGTTTTAAAAGCCTTCGGTAAAGCTGTGTGTGTTGTAATTTACTAATAGGGATGTTAAAAGTTAACAAAATGGCTTCAAATCAAACTTGATGTGTTTTCATTTTAAATATTAATTGTAAAGCTGAATTACTAAATTTGATTAATCAGGTCAGTAAGAATCAAATGAGGACATGATATCTTAGAGGTGAATTTATTCTTCTGTAATGTGGCATGGTCATTTATTATTCCTTGAATAGACCTTTCTCTCAAACTTGGAAGAGTTACCATCTTCAGAACATAAGTATTATTCCCTTCTCACTGGAAGCTTTAAAAATAATGATACTACTATTAGTAACTAGTAATTACTAAATAATAAAGCAACTGGGGTTTTTTCTGTATTGACTTGTGAACTGTTGCTTCTGCTTAGCTCTTTTTTAGAAACTGAGCCTGTTACTTTGGAGAGATGCCACAGTTTATAAACAGCCACAAATTTCCATTGGTAACCAAAGAGACCTAAGTAGTTTTCCATTATTTTGACTTGAGCTTGAATAAGGATTCAAGAAGTAAACATGGAGCTTAGTATTCAGGGAACTTAATACTGGTTTTGATCTTCAGATTTCAGGTAACTATTCCTATTTTCAGAACTAACATATCTTTAGTATGGCTTCAGAAAAAGGAAAACATTTTGAGAGCTATATTGCTTATGCCATACTGAACAATACTGGGCACTGGGTATAATATTTTTAAGTTTAGCATCTCAAGAACAGAGAAGCATTTTTTAGAAAACATTATCCCAATATAATATAAATGAAGTGATAGCCTATTTAACTTTTCTTTTTTAAAGAATCAATAATAAATTTCCTAGACAGTTACTTCTTCTGGTGAGTTGTCTACCCCTTTGTACAAATTAGCATTTTTAATATAGTAAATTGATCTCTTGATGCTAGTTTATCTAGTAGGAAGCTGTTTCTACCTGAATTGAAAGAAATTTGACTCAAATTTCCCAGTTAGATGTTTCTTAAGTATTGCTTTTATGTCGAAGTAGCATTTCCCTTTCCTACAGTTCTGCTGTTAACATAAAGATGGCATTTAAAATTAATTGCTTTAAAATAAGTTTTTAGCAGTTATCACAAAATTGAACAAGAAAATCTCTTACCATTATCTTCTAGCATCTTTTTTTCTCAAGTGATCTCAAGATTGTCTTGGTTCCAGTGAGGGTTAGCTACTAAAATAGCACCTCTCTCAGCAGTGATGAGGCTCAGGATAACAACATCAGTGTCAGGATAAATATCTCTTCTAAAGATGATATTTCCCTTTTACAAAAGTTGGACAGTCTCATACTACCTCATCTTTCTTGTGGCGCTTTTGTAGATCACTGAGAAGCTTATCTTATTTACCAATATAATGCTTCCTAAACATCCATCTTTGGTGAAGAAAATTAACAGTATGGTTAGACTCTACCCATAATTATAGTTTTTTATCAGAATTTGATATTGAGACTTTCTGTTTCTATGAAACAATATTGTTTTAAATATTTTTCTTTTAAAGATAACTTTTTATCAATACAGAAAAACCTAAGGAATGATTAGCTAATGAATATTCTGTTAAAGGTAATTTTATAAAGAAAAAGAAAATATGCTGTCTTTTATAATGGTAAAAATTAGTATTTATATGAAAATCAAGATCTAAGTAGCCTTTCATATATTCAAACTGGTTGCTTGTGATATATTTTCTCTGCTTTCTTATTTTTTCAACTTCAAGGTATTGATAGCTGTTAACATTTTCAAAATACTGCCATTTATATAGCCTTGAAGCAGATGATCTAATAAATGAGAGCAGGAAAGAGACTCATTTACTCTGAAACAGTTTGTATTTTTTCCTTTGGTATTTGCTACAGTGAAAAGAAATCGGGAAAGTAGAAATGTAAGATTTGAGAAGGGAATTGATTACCATGAAGGGAAAAGAAGAGTAAGAATTCTTTAGAGCATGAAGCGATTGGAATTTAGAAAGGTTAAGTCTTTCTCAGTGACTTTTTGAGGACACATTTGAAAGAGCATTCAGCATTCAGAAATTAACTCATTAAAAATATACTTACTGGAATTATGTGTAAGTAAATGAGTATAAATTTTGAGAGGAACAATGTGGGGAGATATATAAATATAAATTTTATAGCTAAGTTGAACACTGAGCATTTGAAAAGTGTAAATTTCAGAGTTGAGAAAGCATTCAGCATGGTGGAAATGTAGTGCTTACTGGTGAGAGCGGATGGGGCTAAAAGAAACGATAAAATATTAAAATTAAGAATTTAGGCATCACCTCAGGGGAAAGCCTTGACAGTGAAAGGGAACTACTTAATCGCTAATAGCTAGTCTGGACCAGACACTTAAATGCGCTTTGGGAATCATCCTGCACTAACCAGGAAACAAACTTGATTTTTCTATTTCTCTCTGAAGCTTTCAAGAGTACCCCCAAGCCCGCCTCCCCTTTTTTTAAGCTACAGCATCTTGATTCATACTGTACTTCCCGAAACATGCTGAATGGATTTTTTTAGGTTACCTGAGCATTTTTGTATGAAGAATTATATCTGATCTTTCTATAACTGTGCCATTCACTTAAATAATTCATGGAATGGTTTAATTTAAAGGAAGACCTAATAGGAAGAAGATTAAAGGAAGCTTTTAGTCAGCCTGTGGCTAGATTTATTGATTTGGTGATCAGACTTGTGTTCTTTCCTGAATTTTAGCTAATGGCAAACTGTGGTCAAAAAATGGCTTTCAGTTAAAGTTTTGACTTCTTATTGTAAATAATATAAAGAATGTCTAAGTAATTAGAAATCCTTTTTAAAAAGTAGAGCAAATGTGGCAAATAGGATTCATTATACAAATTCCATTTCTTTTTATAAAAAACAAACCATTATCATTTATTCATGAGCCAAAGCCATTAAGAAGATAAATCAAGTTATCAGCTTCCTGTCTCTCTGAAATTTGGATCATTTTATAGATCCATGTAATAGAGAGCTTCCTTCCTATGAAACAAAAATCTTGAGACCTAACTCTTAGACTCTTAGTTTTCATTAAAAATCTTTTTTGTCACTTTTAGCTATAATCAGAGTCAAATAGATTATACATTCATTTTGGTAGAGGAAATTTCACAGGAAGTGGACTTAATTATACAACATTCCCTGAGGCAACACAAGGGAAACAATGTTTAAAGTAGATTGTGCTTAGGTAATTTAATGCCCAAATGAATAAAAGATTTTAAGTCAAGCAGATTATTTCTACTTTGGGGAAAAAAAATGTTTACAATCTTCATTTTACATAGACAGTTTTACATTCATTTTTACTTCTGAAGAATGGACAGAAAGCACAAGGGGTTTTTCTCTTTTAATGGTCTAGAAATAAGCAACACTACAAAAGTGTACTATTAACACATGAAGATAGTGGAGACAAAACGGAAGTAACTATGGCTTCTAAATAAAAATGTAGACTAATGGATATAATCCAATGAAAAGGAATTTAAGGCACATGACTCCTATTTCAAATAAAGACAGTCTTTTTTACTTTTTAATTTTGAATACATTACTCAATTCTCTCTTTAATTTCCTAGCACATAAAATATAGATGATAATAGATGTCACTTGACTTCCTGCAGGTTAATTCTTTATGGTCCAAGAGGTGACCCTTGGAGCATACTTGAAAATATTTCTGTATAGCTGTCAAGTACTAACGTGATGACAGGTTTTCAGAGTTTCCCCTTAGAGAACCCTGCAGATTCACATTCATTTCTTTTAGTCTGTAAAGGCCTTCTTGACTTGATTTGACAATAAAGATAATGGTACAATTTGAATTTATGGTTTAGACTCTGCAATTAGATGAACAGTTGCAATTTCCTCCTACTCTTAATAAGGTTTATGTAAAATTGATGTTTGCCTAAGTTATTTTAAAAGTTGATTACATTTGCAGGAAGAAAAGATAATCACTTTTGCCATAGTTATAATCAAATTTAAGCTTTCAGACGAGTATAAAACTCAAGGAGGTTTACTTAAATTATGCTGACTTTGCTAGAATTGGATAAATTCTGTATAAACCAAGTATGAACTAGATATATACTTGAATATACAGAGTTTAAGTAGTAACTTCACAAAGCTGTTAGTACTCATCAATCAGCCTTGTATGATCCACCCCTTACCTAAAAAGTAGAGTGTTTCCCTTTTTATTTCTAATCCTGAAGTTGAATGTTTCTTCTTGGATGTGAGTTCAAATAAATTGATCTGAATACATTTTCATTTCTTATTAAAACCTCATATATAAAATCCAAAGGCTTTGTAGTCTGTTTTCAAAACACTACTGCATATCCTTACCTGACACGTTCAACTTGGAGAAATTTTTAAATCTGTATTACACATTTTCCTTTCAGTTCTTTAGTGTGTCATTTTAGGTCTTCCAGAAACATGTCAAAATGTGATTAAATGTACAAGAGATGTATTGAAGGGCAATGGACACCTTTGAAGAATAAAGGGGAATGGGACTTCACTGGTGGTCCAGTGGTTATAACTCTG EMBV3_14686 CTATGCCTTTAATCGGAATGCATAGCTTTATTGTGTGCGATCCTTTTTTTTTGCTAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41309 ATTTCCAAGCATATCTGGAGTTCACACAGAGAGACTAATTTCTGATTGTAGATCTTGGAC Gene BVV0102_406322 + 0 NULL GK000020.2:42936540-43589496 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116249 1 XLOC_070418 NonCoding TCONS_00116249 XLOC_070418 NonCoding NonCoding - 20:17430321-17431014 - TSS86717 693 1 TCONS_00116249_1 34 0.380952380952381 1 0 0 5.79995259565581e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.19914696898192e-05 0 0 0 0 0 0 0 0 0 0 noncoding ACACTTATTTCCAAGCATATCTGGAGTTCACACCGAGAGACTAATTTCTGGTTGTAGATCTTGGACTCTTATTCTTATTTACTGAATGGAGATCAAAGCTGTCCCTTAAAGGGCTTCCTGCAAGCTGATGGAAAAGGGTTCCAGAACACTCCTTTTTCCTGCTAAGTTAGCAGGGCTTTGTTTAACAGATCATTTCAGAACTAGGAGATAGTATCATCCAATATCCTCATTAAACTGAGAAATCAGAGGCTCAGGTGAATTAGATATTGAGATTTGCTCTCAGAGTGATTGCTCTAAGAAAATGGCTTTGGGGCCAGAAATCCTAGGTTTGAGTCCCAGCTCACCACCACTTACTGGCTGTGTGACCTCAAGCAAGTTATCTTCAGTTTTCTCATCAGTTAAATGAGAGATTTGTGTGGTATTTCACAAATAAACATCTTAGGGGGACCTTTCTTGTAGGGTTGTTGTGAAAATAAACTGAGATAAGACAAGCGAAGTGCTTAGTACAAAGCCAAGCATGTGGTCACAGTAAACATTAATATTATCCTTGCCATTATAAGAGCATTTGTATGCATGAGGATGATACAATATAAACGTGCATGCAAAAGAAATTTTTTTAATGTTATGGGGATTTCTACAAAAGGAATGTAGTAAACATTAAAGAAGACACACAGGCCACATTGTTTAGTCTAT TCONS_00113433 . 5' 150113 TCONS_00113433 . 5' 150113 EMBV3_06913 CCTGTCCTTCACTGTCTTAGATCACTACAGGGTTGAGGGGGTGATCTCTGTGGAAACAGA Gene BVV0102_219910 - 1 EMBV3_30936 GK000001.2:57145887-57156325 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05599 GCCAGGTGGAATTTGGATAAATCTAGGTCCTCTGCTGTACCACTTTGAAAATTTGGCGAA Gene GeneID:538441|LOC538441:XM_002689664:3_cdna UTR3_Alt 2 NULL GeneID:538441 8 GENE LOC538441 NULL similar to chromosome 9 open reading frame 41 EMBV3_11005 GAGCTGTTGGCCGTACTAAAGGAGCCTGAGTGAGGACTCTTGGCCAGCTCCTGCCGTGGG Variant GeneID:616311|PMF1:NM_001038212:221_cdna 643^859 1 EMBV3_27552 GeneID:616311 3 GENE PMF1 MGC134238 polyamine-modulated factor 1 EMBV3_32339 CAAAGGAAGAACCAAGAGCAGACAGACACATCTTTCCAGATGGGCCCTCTGTGTCTCCAC Gene GeneID:100295204|LOC100295204:XM_002698009:126_cdna Constitutive 0 NULL GeneID:100295204 25 GENE LOC100295204 NULL hypothetical protein LOC100295204 EMBV3_31118 TAGGTCACTACCAGATGCTTTCCAGGCTTTTGACCGCTGTCTTTGAACCGACCAACTGAC Gene BVT0102_131840 + 0 NULL GK000020.2:9094325-9179366 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113251 1 XLOC_068990 NonCoding TCONS_00113251 XLOC_068990 NonCoding NonCoding - 20:9095169-9097870 - TSS84761 2625 2 TCONS_00113251_2 86 0.243809523809524 2 0.0285185185185185 0.000269522750167541 0.000294754434144572 0.000193893279001939 0.000170828500717271 5.66599777663958e-05 4.0880659245376e-06 6.66481303942476e-06 0 0 4.07530883695807e-05 0 0.00013621655330815 0 0 0 0.0019016362467472 0.00109416937249775 2.8675295924546e-05 0.000196688407589933 0.000290397453962318 0.000117959596148124 0.000149826874412226 1.39794950248234e-05 0.000894112520805922 4.7509550864246e-05 0.00104944004407505 0.00052006973664951 1.09773555005769e-05 5.54814037319834e-06 0 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 1e-56 226 84.69 0.0784761904761905 0 noncoding 0 0 0 0 -0.0207923318992657 0.887597235499016 0.0708794438108642 0.26741713046903 GAATTCTCCCTGAAATTAAGCTCTAACTTGTTTAGAGTATTGGAATAACCATTGCTAGGAAAGCAGTTGCGGGGCTGTGTTCTCAGTGCTGCCTGCACATTAGAATCATCTCAGTAGTAGTAGTGTTAGCTGCTCGGTTGTGTCCAACTCTTTGCGACCTCACAGACTATAGCCTGCCAGGCTCCTCTGTCCCTGGGATTCTCCAGGCAAGAATATTGGAGTGGGTTGCCATTTTCTTCTCCAGAGGATTTTCCCAATGCAGGAATCAAACCCGGGTCTCCTGCGTTGCAGGTGTATTCTTTACCATCTGAGCTATAGGGAAGTCCCAGAATCATCTCAGGGAGCCTTAAAAAAAAAATACTAATGCTGGGGCCTGGGCCCTGAGGCCCTGATTTAATTGGTCTAGAGGGGAGCTCTGGAATTGGTTATTTTCCAAATTGCCCCAGATGACTCTTATGTGTAGTGAGAGTTGAGAAAGATCGACTAGGATAAAATAGTGGCTCCCACGACCCCCTCACAAGGATTCCATAAATATTTCTGCTTCTGGCTTTACTCATTAAGATAGAAAGCAGGAGACCTTGAGATCATTCTGCTGACTTAGGCCTTCTTACCTGTTCTGTCAGAGCCTCACGAGAGGAGGCACACACACACACACCCCCCCCCACACACACTGTATAAACACACAGTTTTTTTTAATAGGAGATGATGCCTGTGATATTTATGATCACTTAATATGTTTAAAAATACATAGTCAGCCTACAGTGACTGTTTCTTCCTAGATTCGTGAATCATGATTCCAGTGAGTGGTGGTGGCTGTGAAGTGTGATTTGAGCCTAGCAGGTGGGCTTTCCTTAGGCACTGGATTCTGACAGATAAAGCAGTGCTGACCAGATGTCACATATATGTGACTGCCCGTAAGCAGTGACCCTCTGGTACTGTGTCTGAGTTTATGTAAAAACTGCTTCTTGGTAGTTTCAACTCTTATTTGTAGAGCTAGGTACTGTTTATTATTTGCTTCTTCTCCTCCCAAAATTCCCAGTACATTTCATTAGACAGTCTGACCCGTCTCTGACTGTGGGATGCCGTTTTTCTTTTTCTCTTGGTCAGGTGCTTCCCCATCAGCCTCATCCAGTCCTCGTCAGTCACGCACGCACTTTGTCAGCCCCTGATGCGACTCCTCCTGCCACTTTGGTTAGGCTCCTTCCTCCAGCGTTGCCACCACAGCTTGCCAAAGCCGCTTGAGTTCCCTGCAGCCATCCTTGCTTGTCTCAGGGTCAGGGCACTTGCAAAGGGGATGGTAAAGGGAGGATCGTGGGTTTCTGCAGTTACCAGAACAACTCTGAGTCAAGAACCTACCCAGAGGATAGGACCCAAAGGATCCAAACCTATCCTTCTGAGGGGCCATTTGCTTTCCATTCATCATTTTTAATATAGCTCGTCAGTGCCTCCAATGACGTCACTCGGAGACTGGCAGAGTGGTCTCTGAAGCCTCCAGCTCTCATGGGCCTGTTACATATTCATTCTTTCAGCAGCCAGGTGTTGAGCACCTGCCATAAAGGCTGCAGATTTCAGTTTGTTCTGGGTGTGCCAAACTGGAATAGGAACTAGGAGATCTTGAATAGCAAGTTTATAGACTTTTCCACCCAAAAAGAGTCAGGTGGGAGTGTTTGAGGAACAAGTTAATGTTGAGATGGAAAGAGCATGGTCCAGAATGGTGGTTTCTACATTGTGTGTTGAGAAGCAAGAGGTCCTCTTAGGCCTTCTAGAGCTGCTAGAGGAGGAGAAATTCTCAGCCTTCATCCCCACTTCACTCAGAGCAGCTCCAATTCCATCTGTTTTATTTGTTAGACTTCCAAGTAAAATTTCATTTGGAGGAAGAAAAAAGGGTCTAGGAAAAGTAATAAAAAAACTGCTGATTAATATGCCCTGACCTTCTGAGAACCAAGTCTAAAACCTTGGTTTTGTGTGTGACCAACATCCTGATTTGCCTGGGACAACCTAGGTTTATACCTCTTGTTCCCACTTAGTCACTAAGAGTGTCATCTTAACTCTCAAAAATGTTCCAGTTTGGGTGATGAATTATATGGGCACCCTATGCGTAAGTACAGAGTACAGAGCTAAGGGAAGGGATGGCCAACCTTGCCTAGAGCTGTTAATAATGAGCCAGAACGCAAGCCTGAAAGAGAAGCCATAAGGCCTTTCTCAGAGAACTAAGGGATGAAACCATCCAAGGTCATCAGCACTTCCCCGGCCAGGACAGCATGACATTTATCACGTTATGACACTTTGAGAATAGGTCACTACCAGATGCTTTCCAGGCTTTTGACCGCTGTCTTTGAACCGACCAACTGACCCATCCACGTGGCATATTTTCTGTTAATCTTTTTATTCCAGCCTATGATTACCCCCTTTTGTTGCCTTTCAACTCATTCTCTCTTTTTAAAAATTTATCTTCTCACTGGCCATGAGACTGAGGCTGACCTTCCATGATCTCACAAGGGTATCTGGTATATTTGTATATGAGAAGTTGCGTGAGACAGCCAATGTGCACACTGTATTTATTAAGCCCTGAAGGCATTTAATAAAATATTAACATCGTGTTTTGAATTATGATCTTTGTCTGCT TCONS_00113249 TCONS_00113250 s 3' 846 TCONS_00113249 TCONS_00113250 s 3' 846 EMBV3_23669 CGCGCCCCATCCGGTCTGGTATCTGCGCGGTTGTAGCATGTTCTATGTGTTTTTAAACGA Gene GeneID:508421|SNCB:NM_001075360:90_cdna Constitutive 0 NULL GeneID:508421 7 GENE SNCB MGC140612 synuclein, beta EMBV3_06450 CCTCACAACAGCCCTGTGAGGTAGGCTGAACAAGTTACACTGTTGTAAAGGCAAGTTACA Gene BVV0101_069358 - 0 NULL GK000008.2:97006478-97035506 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226315 TCONS_00226321 TCONS_00226318 TCONS_00226314 TCONS_00226322 TCONS_00226319 TCONS_00226320 1 XLOC_137981 Coding TCONS_00226314 XLOC_137981 Coding Coding FSD1L 8:96948215-97012514 j TSS169235 7880 1 TCONS_00226314_2 497 0.0784263959390863 13 0.877647827304115 0.000198963218971561 0.000282309681766358 0.000221053731258074 0.000150034992203539 0.000167526849910688 9.39571003058762e-05 0.000177501547045818 0.000163943612780066 0.000368871286308269 0.000165546697797936 3.94726302228059e-13 1.79147046548426e-05 1.59368445997632e-08 2.04012974841819e-07 5.13581417917032e-05 0.000624432181188297 4.54146852004034e-09 0.000903861647153233 5.16836214955752e-09 0.000161259040368876 0.000107831352332594 2.69261144580991e-08 5.12745012982908e-05 8.63115681970991e-05 0.000156520042270138 0.000128550191997781 1.577202774368e-06 0.000165362340389119 5.45801533746851e-05 1.348421023522e-11 XM_005210491.1 FSD1L PREDICTED: Bos taurus fibronectin type III and SPRY domain containing 1-like (FSD1L), transcript variant X3, mRNA. 0.0 9005 99.35 0.638071065989848 NM_207647.2 FSD1L Homo sapiens fibronectin type III and SPRY domain containing 1-like (FSD1L), transcript variant 1, mRNA. 0.0 3600 79.99 0.499746192893401 TCONS_00226314_2 sp|Q9BXM9|FSD1L_HUMAN FSD1L_HUMAN FSD1-like protein; 0.0 999 96.35 0.989939637826962 2 coding 0 0 0 0 0.00466592946788968 0.963538542670866 -0.0262979142286388 0.646750145408204 CGGCGCGACTACGGCGCGCGCCGGGCTGGGCGCGGACGGGGCGGGGCCGGGCGGCGCCGGTGCGAGCTGAAGCTGAGGCTCAGGCGGCGGCGGCGGCCCAGCGGAGGCACGGCCGTGGGTAGCGGGCTCGGCGTGTCCGACCTCCCTCCGCCTCCTCGCAAAGTTCTTCGACGCGGTTTGGGGTCCAGCGGACACCGTCCTTGGCCATGGACTCCCAGAAAGAAGCTCTGCAAAGGATCATTTCAACTCTGGCAAATAAAAATGATGAAATTCAGAACTTTATTGATACACTAAACCAAACACTAAAAGGAGTTCAGGAAAATTCTTCTAACATACTTTCAGAATTAGATGAAGAATTTGACAGTTTATACTCCATATTGGATGAGGTAAAGGAAAGCATGATTAACAGTATTAAGCAGGAACAAGCGCGTAAATCACAAGAGTTACAGAGTCAACTTAGTCAATGTAATAATGCCCTGGAGAACTCGGAAGAACTACTAGAATTTGCAACAAGATCATTAGATATAAAGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAGATCAAGGATAGAGTAACAATGGCTTCAGCCTTTCGCCTTTCTTTGAAACCAAAGGTCAGTGACAACATGACTCATTTAATGGTGGATTTTTCTCAGGAAAGACAGATATTGCAAACTTTGAAGTTTTTGCCAGTTCCCAAAGCTCCAGAGATAGATCCAGTAGAATGTTTGGTGGCTGACAACTCTGTGACAGTAGCTTGGAGAATGCCGGAAGAAGATAACAAGATTGATCATTTTATACTGGAATATAGGAAAACGAATTTTGATGGACTTCCACGTGTAAAGGATGAACGATGCTGGGAGATAGTTGATAATATTAAGGGTACTGAATATACACTATCAGGTTTAAAGTTTGATTCAAAGTACATGAATTTCAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGAGTATTCTGATCCAGTGACTCTAGAGACCAAAGCACTTAATTTCAATTTGGATAACTCATCCTCCCATTTGAACCTGAGAGTTGAAGATACCTGTGTAGAGTGGGATCCTACTGGAGGAAAAGGTCAAGACAGTAAAAGTAAAGGAAAAGAGAACAAGGGCAGAAGTGGTACCCCATCCCCTAAACGGACATCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGCAGAGATCGTTTTACGGGAGAATCGTACACAGTGTTGGGAGACACAGCTATTGAAAGTGGACAACATTATTGGGAGGTCAAGGCCCAGAAGGACTGTAAATCCTACAGTGTGGGAGTGGCGTACAAGACTTTGGGGAAATTTGACCAATTGGGAAAGACAAACACTAGTTGGTGTATCCATGTGAACAACTGGCTACAGAACACATTTGCAGCAAAGCATAATAATAAGGTCAAAGCCTTGGATGTTGCTGTTCCTGAAAGAATAGGTGTATTTTGTGATTTTGATGGGGGTCAGCTTTCTTTCTATGATGCAAACTCAAAACAGTTGTTGTATTCCTTTAAGGCAAAATTTACTCAGCCAGTACTACCTGGTTTCATGGTTTGGTGTGGTGGACTTTCTTTGAGTACTGGGATGCAGGTTCCAAGTGCTGTGAGGACTCTTCAGAAAAATGAAAATGGAATGACTGGCTCCACTAGCAGCTTAAACAATATTACTCAGTGATGCCTACTCAGAATTTGTTTATCTTCCCCCACTCCTTTTTGATTGGGTGGCCTTTTCCGTGCAGTTACTAATCGCAGCAGTTTACAAGTGGTGGAAGTCAGGTTTGCTACCTTCTGCTCTAAGGTCTGGAGTCTGTTCGCATCAGGCATCTAGTAGGAAGCATTCACAGGAGCCTGCTATGGGGCATCAGAGAAGCAAGCAACTGATGTTCTGAAGAGTAAATGAGAAAAAAAGGCAGTGTTAAGTAGTTACATAGAAACTCATTTTTGTGTTTCTTGGATTACTTTGACTATTCTAAAATGTTTAGTTACATATGGTAGCCCTAGGACCTGAGGGAAAAGCATTTAAATCGTCTTTCCCCTATATGTTCCCTTTTTTTTAATGTCATCACTACCTATTATTTAATTCTTACACTGAAGCTTTAAAACTGTACAGTCTTCCATGGTTTTCTAAAAACTGAAAAAAATTGGGCATGCTAGAAAGGTTTTCTTACAGTAGTTTATTTTTCCCCTTTTATAAATAAGTTGAGGTTTGCTAAATTGTTATCTTTTGTTTTTCAACTAGATTGTATATTATTTTCTTCTTTCCAAATATTGTGATATTTCTCTCATGGTTTATAACTCAAAATAGAGAGTGGACAGGAAGTGTTTCTAGATACAATAGCTTTAAATTGCCCAAATTTCAGTTTTTTACCTGCTGCAAAGAGATATTCTTTATACGTTACCTTGTTTAATTAGACCTCTTTCCATTATTTTGAATGATGGGTAAGACTTCTTTAAAGCTTTATATTTTCTGGGTTTTTTGTCTAGTTTAATAGAAACTTTAATAGTTTTGGTAAAATTCCCACTTGAATTTGGTGTAATAACTGGTAGTAATTATGCTTATTTTTTAACATTTTTAGTAAGGTGAAAGATCATTAAAGCTATATAGAAAGTAGAAAAAGCTACCTATTCAAGTTTTATCTATACAGAAAAGGTTATAAAGGGAGGTGCCTAAAACTATTCTTTACTGAAGTCATCTATATCTGCTTTTTAGTAAGATGGAATGGTTAAAAACAAGAGTTTTGAAAAAACTATGTATCTCTGACTTATTTGGCACACGAATTTTTCAGACATACCTATTCAGAGGTTATTTTTCTCTTTTTGCTACTTCATTTGCTTTCTAAAGGATCATAATTCTTCAAAAAAAATCAACATAGAGTGATCTTTACTATACATAGGGAAGATGTGTTAAACCATGAGTAACACCCATGATTATTGAGCAAAGCGTTTATATTTTTAAAGTTGATTAAAATTTGTAACAAGTTCTTTGAGCCAAATTGAAAGTTGTCATTACAGTATTTAGGAATTCCTTGAGCATTTTCAAGAGGTCTGGGTTTGTATATTCCTTAATTTTTGAAGCTGTTACTTTCTCCTGTTGACTTTCTTCCATTCATATTTTAAGTATATTGTCTTACGATACCTTTCTCCCTAGAAGTGACCATTGCTGTGTACATTTGAGTTACTGTCTATAGAAAGACTTGTGGGATAGGAACAGCTCAGTTTCTCTTAAAGTTTATTGCTTACTGATGAGATGTTTTGTTCTTTGTAAAACAAATCTAATGAGGAATTTTATTCAAACTGGGTATTCATTTTTCCAGAGGGGAGTCATATCTATACCGTTGTCTGATAACGTATTTTAAAAACCAGAAGGCAGTTTAGAGTATGATATTGTCAGTAGATATTGTTTTGATTCTCCAAATAAATATAATTTTGATTTTTGTTTTTCCTAGAGATTTTGAAAGAAATTTTTGGATGTCCTGTTCTCTGCAGCAGGGTTATTGCAGGACCTAAGGAAACAGGAAGTTATAATTCTCTTTCATAGAGTTAAACCTGAAAGCAGTAAGTTAGTGGTGGAGCTGCTTTATGGGAACAGTCATGTATATTTTAACAAAAATGACACTGAAAAAGCCAGAAGTTCTTGTATAAAAATTTTTACTATTATGTCTGTATAATTATATCCTGTTTTTAATTTTAAGTGCCTTCTTCCTCTTAAGCTTGCTCTCACTCCATGCCCCATGCATTGTCAACTGATATTTAAACCAGAGACCATTACGTAATACTGGTGAGGAGTTCTATTGCAGGGGCATAAGGAAAGGAAAATACTAGTCAGGGGCTGGAGGAGTGCATATGATTCTTGTGTGTGCTCATCCCATCATTTGAAACCCTTCGTATAAAACATTGTAGTATCATTTGGAAAAATTCATTTGAAGTAATACTTTTATACTTCAAAATAAGAATCTGGGGTTTCCCTCTTACTATGCTTCTTCTTAAAGGTCCCCCCCCCTTCCCAGAAATACAAAAAAAAAAAAATGTGTGGGCTTTTAGCTTAATTCATTTAAGTTTATTTGTGTTAAGTTAAACTGAGGAAGTTTGTCATTCTCATTTTCAAACTAGAAAATAATCAACTGTAGTGCCTATTTACATAGTCTTAAATTAAGGTAACTGTTAACTTGACACAATATATAACATTCTCATTAACATTGGAATTAAAAAATATTGAGATTTTTTTCCTCAATTGAAGACATGAAAAGTTGGTATACTCTTTAAAATATTTTTTTTTTAATCTTTGTTTTGACAGGTCAAACATGATTGCTTTCTACAAAAGAAATGCATGAGAGGTTGATGGTAGTGGATATACCACAAGTGTAAAAAATTATGTTTTATAAAAATATACACTTAGTATTGCCTTTCTCTTTTAGCAGTTGAATCTCAAACCAGTTGTAGTAAACTGGATAAAAAATGAAGGAGTTGCCTTAAGCACTTTAGAAAAAAGAATTTTTTTACATTTCATTTTGACTCTTTGGACTGACTGTCACATACATCTTTAACTTTTCGTAAATATGTACATACCAAATATTTACTAAGTGCACATAGAAATTTAATATACAGTAATTCTTTGAATGTTCCAGGTGTAGGTAGACAATTTGAAAGTATTAAAGGTGTGCCTGTCTGTACAGGGGTTTAACTGGTGGAATCTGTACTATTTTGACAAACCATGAACTGCTGCTGTACAGCTGGACTTCACCTAATTTGTTCTGCAATCATTTTCCCCCATATTGTCATCTGAAGAGACATACTGGCTTGGTTTTATTTGCTCACTTACGAAATTAAAGTATGTGCAGTATTATGTATAATTTGAATTTTTGTGCTGATCTTCAGTGATATAAAGAAGAAAATGATTTAGTTAGGCTAAGATACTCTTATTTCATGATTTACCCAAAATGATTAATTTTCCTACATATACTTTAAATCACATAAAATTATTGAGTTACTTAGTGTTTTTTGGAAACATATGGGGAAAATTAGAAAAGGATATATATGAAAATCTGCACCCCACTCCAGGACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGAAGGCTGCAGTCCATGGGGTCGCTAAGGGACAGACACGACTGAGCAACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTATTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGATGGGCTGCCGTCTATAGGGTCGCACAGAGTCAGACACGACTGAAGTAACTTAGCAGATATATGAAAAATGATTATTTCAAAGTATTCATTTTAGAAGGGACAGTGTAGACTTCCATAAAATATGTGAATCTAAGCTAAACAGACTAAGGACTGTATTTAAAAATCATCATGATAATTCTTTTGGCGAAAACTCCATATTTGTAAGATCATTATTCATTTAATGGTTAATTCGTGTAACAAATATTTAAGTCTGGGATGGCAGTCATACTTGGTATTCAGATTTCCTAACTTTGTCAAGTTTGATTTTCTGTGCGTACAGTACTTTTGCTGCTTTTGAAAGGTATGACAAAGTTTGCATCTTAAAAACAATGTTTTTGCTAATCAAGTCAGAAATTTTAAAAAGTAAATGTTAAGAGTTTATAAAAAATTATAATTAACTGCATGTAAAATGGTTCACCTATATGTAGTCATGTAAGATGTTTCTGAAAAAGTTTCTTCCCTTGATTTTATTTTTACACTGAATATATTATTTTAGGGAAGTAAATGGTCAGCATAAATTTACTCGGCATCCAAATAACCATAAAGTTATTTGTTATTTTAAATTTATATTTCTTAATACCAGTGCTGGAGCATTTATAAGTGATCATGAATTTTCCTTAATCATTGCAGAAAGATTACCTCCTAGTCAGTATAGTTTTAGTTTTGTGTGTATCTTACAGTATTCATATTATGCAAATACTTGTGATCCTAATGTCACATATGATAGCTTTGTTACCTGGAATATTTGATTAATGTAAATAAGCTTTTTGAGTAATTTGGAGGTTAACTGGATCACACATGGTATATGTTTTTGTTGAAAATATATTGTTGGGTATGCCATATAAAGGTTAGTATTGACTTATAAAATAAATATCAGAGATCACCATAGTACTTTTCTCCTACTCATATTCAAGTTAAAACAGTATTTGTTATTTCTGAGTCAGTATAAGGTACTGACTTTTGATTTGTAATCATTTGAGCTGTGTTAGTTTAAATTGGTATATTTTCTTAATGGTACCCAATCAATATAAGTTGGTTCCTGGGGATGAACATGCAGAGGATTTCACAGTATGTAGCACAGCCCGTAGGTGAATGTGTTTGCTTTGCCTTGGAGCTACTTAAGTTTATTGTAAGTGATTGGTAAAAGATATTTTTGTTAGTGTTAGAACTTTTTGGAGAGCTTAAGGGTTATGAGAATGCTTTTTTTTTTTTTAACATTTCCAAAATCTCTAAGATACCAAAGCATTGCATCTAATTTACCTTTTAGGGGAGACTCTTTAAAATCAAATTTATAACTAATTCATACAATAAGATACATAATAGCTAAAGTTTTGAAATGATTTGTATTAAAAACCACTAGTCTTTAAATTTTATAGATATAACAAAAATATTTTGGCTTAATCTCTTTTAAAGTATTTAAAATTAATCACCTTAGCTCTACCATATACTGTATCTGTGATCTCTACATCATCACTTATCATCTTTGGGTTTCCACTGCCTTACATAAAGTCAATGTAACTTGCCTTTACAACAGTGTAACTTGTTCAGCCTACCTCACAGGGCTGTTGTGAGGAATAAAATCAAATGGAGTATATGAAATAGATTCAACCACAGTAAAATGCTATGTAAATGTGAAGTATTACTTTTAGTTAATAATGGACTTAAGTGTTTGGATACCTCTAGATGCCATTTACTTTGATAAAGCATGTGCTTAAAGTGGTATCACCAGGACATGAAACCTGAATTTTTTTTAAAAGCCTGATTAAAATATCCTTTAACATTTTTAGTTTATGCATGACTTGTGGCCTTTTTGTATTTTATCATCAAGGTGTACTCTATATCAAGACTTCTAGAACTGTAAAATTTCTCCCATAGCATTAACGTGTGTCAGAGTAGAATAGTAGCGTAAATAAATGATTTAAGCTGTGTTTCCATCCAGGCATTTGCACTTTCATGACTGCCCAATGCCACATGGAAAGACTGAATTTGGCCTAAATAATTCTTTGCAAAATACCAGCTTTGGAATGGTTCAACAGTTTGTTCTCATTGGATAGATGATATAAGGTGTACGTGACCATTTAAAACATTTGATAACTTTTGTTGCGTTACTGTTTTTAAAAACACAATGACACATTTCAAAACTCTGTTAACCTGGATATCATTTATTATCTCTCCTAACATAACTTGTTTTGCTTTAAACTGAATTAAGTGGCTTACAAATTATCTTGATCCACAGATTATTTGGTTTTTCTATCATCTGGACATGATTTTGCTATGCAGTTCTGATAATAAAAACTCTAATTCCTCAGGTTTAACATTTAAGTTAAAGATGAACATTAATGAACTACTTACAATGTACGCAGTGCTGAAAACTAGTGTTTTATAATAAGCATTTTGCCTCATTTTTTTGGAAACAAGACAAAGCTTTTAAAATGGTTTCTGAAATTTCAAAATAGAGTATTCAAGATAGAGTACCTTGTATGTTGAAATAATTGTATGTTCTGTATAGAATAACCAAATTCTTAAAAAAGCACCTGGAATATCTCATCTAAAAATTAAACTTTTTTTTCTTGCTT EMBV3_27533 GCACTGCGCAAGCTGTTACACTGCCAATATCATTGAGACCCTTTCACCAGCCAATTAACG Gene BVV0102_038597 + 0 NULL GK000023.2:16526345-16540674 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134248 TCONS_00132521 TCONS_00134242 TCONS_00134251 TCONS_00132522 TCONS_00134249 TCONS_00134250 TCONS_00132524 2 XLOC_081346 XLOC_080800 Coding TCONS_00134242 XLOC_081346 NonCoding NonCoding C23H6orf226 23:16525454-16542092 o TSS100113 988 2 TCONS_00134242_1 53 0.173076923076923 5 0.940914828394542 0.0172902464935273 0.0170944378631449 0.0154067533946881 0.0147027008968222 0.0109535256038015 0.00568309665871184 0.0056907370056725 0.0069457433031347 0.00621429588199876 0.00368597042803722 0.000527074070322241 0.000416519790633422 0.00175253799481707 0.00648089515807827 0.00500497672711486 2.86159600746065e-12 1.56354035676852e-37 0 0.011724337905261 0.0273659758290531 0.00837464209151097 0.000201732220869583 4.08856549518376e-16 2.37922161326768e-27 0.0105167454155602 0.0190418693028298 0.00739703223594418 3.88746803019557e-05 9.60257970512104e-14 0.00256402522810455 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 1e-18 98.7 81.55 0.101214574898785 0 noncoding CCTCCTGGCCTGCCTTCATCTTCACTCCTCCACTCTGTGAAAGCCAGGGATAGTCTCCACCGCAGGACGTGGGGGGAGAGTGGCTAGGCTCTGCAGGGGCGTCGCTGGTTCCCAGTTCTCCTGAGGCCAGCGGAGACATCGCCTCCGTTATTTTCTGTCTGGCACTGCTGGGCCCGGGATGGAGGTTATCCCCGCACCCCACCACGCGCCACGTGTCTACGCAGTAGTCTCAGCCCGTGCGTGAAAGCAGCCTTCCCTGTTGGTCGAAACCTTCCCCATCAGTCGCAATTGCCACTCAACAGTAAAGAGCAACATTCTTCTAAAGCAACTCCTTAAAGTTACAAGTTACTCTTAGATGACAGAGGATCTCCCAGAAGTGTCGTAGGATCAGTTTTCATGACCTGTAGCCGTCCCATAAGGAAACCCCACTGTGATCATCAATTGCTTTACAACAGTAATCCAACCTTGGATGAAGACTGGATTCACCATCACCTGCAACCAGGATATTATTCATACTGGAAAAGACATGGGATAAAGGATTCCTTAAAGCCATGTTAGAAGGCCTTTCCTGAATGAACTGAAACTCTTGTTTTGACACCTGACGTTAAGACCAGCACTACCAGACCATGGTGAGAAGACATCTGAAATAAGACAGCTGACCCAAGATTGTATACTATTTTGACAATTGCTCTTAGTTTTGCTTAGGAATCAAATGTATTTCTTGGGCTCAAACACATCCAAGTTTCAAAACCCAATTATTTTAAGACAGTCTAGCACTGCGCAAGCTGTTACACTGCCAATATCACTGAGACCCTTTCACCAGCCAATTAACGATGCCTCTCCTGCCATGCTGTTGTTGCGTAGTCACTAAGTTGTGTCCGACTCTGCGACCATGTGGACTGTAGCTCGCCAGGCTCCTCTGTCCAGGGGACTTTTCAGGTTAAAATCCTGAGCTAGAGAAAATCACTAAGCCAGCTGCAATGCTAAG TCONS_00132524 TCONS_00132524 r 5' 0 TCONS_00132524 TCONS_00132524 r 5' 0 EMBV3_00847 ACCCTCAAGCTGGTTCCGTGCAGACTGGAGGTACTGTCACTTGCTATGAAAATAGAATGG Variant GeneID:280963|ZP2:NM_173973:282_cdna 92^168 1 EMBV3_12598 GeneID:280963 25 GENE ZP2 NULL zona pellucida glycoprotein 2 (sperm receptor) EMBV3_23007 TCATGAAATTAGCTGCAGTAGGGACCTGGATGGGGGACTTTGTCACAGCTTGGATGGTCA Gene GeneID:100336732|LOC100336732:XM_002687357:36_cdna Constitutive 0 NULL GeneID:100336732 5 GENE LOC100336732 NULL transmembrane protein 117-like EMBV3_43258 CCTTGAAAACGTATTCAACCTCATTAATAATCAAAGGCATGAAAACTAAGACAAGTTAGC Gene GeneID:516801|CLUL1:NM_001034520:116_cdna Constitutive 2 NULL GeneID:516801 24 GENE CLUL1 NULL clusterin-like 1 (retinal) EMBV3_10324 GCCGCAGCCCCGACCGCCGGGCACACCCAGCAGGGGAAAGATGAGGCTGCTGTTCTCCAA Variant GeneID:514786|CCDC107:NM_001075681:50_cdna 155^309 1 EMBV3_29471 GeneID:514786 8 GENE CCDC107 MGC134555 coiled-coil domain containing 107 EMBV3_21583 CCCTGTTTCTGACTGGTTGTTTTCCATGTGGCATTATTCTCATCCTCCACTACTAGAGAG Gene GeneID:538104|ZMPSTE24:XM_002686457:481_cdna Constitutive 1 NULL GeneID:538104 3 GENE ZMPSTE24 NULL zinc metallopeptidase (STE24 homolog, S. cerevisiae) EMBV3_16663 TCCAGTCTGGAAACCCGGACCGAGATGCTTGGATCCAGCGCAGAGCAGGAGTATCGAGCT Gene GeneID:505030|PRICKLE4:XM_002697293:101_cdna Constitutive 0 NULL GeneID:505030 23 GENE PRICKLE4 NULL prickle homolog 4 (Drosophila) EMBV3_02874 AGGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCCGAGAGTGTAACTGGCAAAGTTGGAG Gene GeneID:520500|SMNDC1:NM_001035337:45_cdna Constitutive 0 NULL GeneID:520500 26 GENE SMNDC1 MGC127819 SPF30 survival motor neuron domain containing 1 EMBV3_11156 AGCACCTGGAGACGTACTACACCCTATATGAACCTGTCCTGACCTTCTACCAGCGGAAGA Gene GeneID:100139356|LOC100139356:XM_002688912:207_cdna Constitutive 0 NULL GeneID:100139356 7 GENE LOC100139356 NULL similar to mCG5576 EMBV3_02546 GAACGTCATATGATTTCTTCATGGGAACAACCAGTGAGAACCATCCAGAGAAGCCTCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28551 ATGGTGCTGGTGCTCAGACAAATTTCAGCACCATGTCGATGTGGGAAGACCGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_04531 CAGTAGTCTAACCAAGCCAAACATTGGTGGTATTGATCTGCAGTTGGTCTTGTTCTCTTG Gene GeneID:613924|GCNT2:NM_001101227:241_cdna Constitutive 0 NULL GeneID:613924 23 GENE GCNT2 NULL glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) EMBV3_25010 ACGAGCTGCTGTGCTTCAGGATAGACTTGGTCATCAGCATCCTCCTCATGGGGGTCTTCA Gene GeneID:615853|MRGPRD:XM_002699437:132_cdna Constitutive 0 NULL GeneID:615853 29 GENE MRGPRD NULL MAS-related GPR, member D EMBV3_41791 GCCACTGCATACACTCAGGAATCTAATGTACCTGGTCAGTCCGAACTCTGAACACTTAGG Gene GeneID:538831|LOC538831:XM_002690951:304_cdna UTR3_Alt 2 NULL GeneID:538831 10 GENE LOC538831 NULL similar to CG11877 CG11877-PA EMBV3_29282 CCCTGGAGCCATATCCTGCAAACGAGAATTCCAGACTTGCCTCTGAGAAGGTTGGTGACT Gene GeneID:511555|RNMT:NM_001098942:86_cdna Constitutive 0 NULL GeneID:511555 24 GENE RNMT MGC165764 RNA (guanine-7-) methyltransferase EMBV3_14339 CAGCAGCGCAAGCGAGACGGGCCTGACATGGCCGAGTACTACTATGACTCACGCCTGTGA Gene GeneID:785668|MGC159418:NM_001099196:117_cdna Constitutive 0 NULL GeneID:785668 15 GENE MGC159418 NULL hypothetical protein LOC785668 EMBV3_34667 GAAGAGCTGTTTTAAAGATTGGACTTCAAGGACACCATTGCAGTGGCTGGATTTGTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17924 ATGGGGAAACCAGCCTGCTGGGGCAGGAGGCTACCCTGGACAAGGACCTCCTGGGGCCTA Variant GeneID:786492|LGALS3:NM_001102341:143_cdna 209^262 1 EMBV3_29324 GeneID:786492 10 GENE LGALS3 MGC148757 lectin, galactoside-binding, soluble, 3 EMBV3_00551 TTCCAGACCATCGAGGAGCTCCAGAAGAAGGTACGAGACCGAGGTATCCATGCGGCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38951 ACCGAGGCCCCCGTCTGGTCTCCGGAGGTCTTGGGCAGCCCGACGAGAAGTCCGGCCGAA Gene BVT0102_142605 + 0 NULL GK000026.2:21896299-22001774 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00153512 1 XLOC_093276 NonCoding TCONS_00153512 XLOC_093276 NonCoding NonCoding - 26:21904064-21904384 - TSS114682 320 1 0 0 0 0 0 0 0 0 0 2.46566809746456e-05 0 0 0 0.000681453929653384 2.93999306468191e-05 0.00018398245539061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0460699109567194 0.71067233790457 0.0087767505252804 0.853111713149118 CTGGCTTTTCCACTTTCCACCAGCCCCTGGGTTTCTGATCTTGAGGGTTTGCATTCATCCCGTCCAACATCCACTGTCGCTTGATTCCTCCGGCTCTTCTCCAGAACCGTTCACTTCCAGGCAGTCGGCCCCGCCCTCTCTCCATCAGCCTCCCCACTCCTACGAAGTGAACCTCGGGCCGCTGGAGACCCTCGAGCTGACACCAGTGGCCCTTCGGGGCCGGCGCGACCGAGGCCCCCGTCTGGTCTCCGGAGGTCTTGGGCAGCCCGACGAGAAGTCCGGCCGAAGGCACCTCGCGTCCTTCCCTCCCTGCTTATCCC TCONS_00151817 . 5' 7145 TCONS_00151817 . 5' 7145 EMBV3_27020 TGATGCTGGGCATTGACTGGAAGTGCTGCTTTAAACTCAATAAAGAGAGGCTTCATATGC Gene GeneID:407151|TRPC6:NM_001166572:11_cdna Constitutive 0 NULL GeneID:407151 15 GENE TRPC6 trp6 transient receptor potential cation channel, subfamily C, member 6 EMBV3_00178 CTACATCAGCCTTGAAACAAGTTACTAAAGTTCTGTTCACAAAAGGAAGCCACTGCCTAA Variant GeneID:514440|RAD18:NM_001035295:95_cdna 670^769 2 EMBV3_08377 GeneID:514440 22 GENE RAD18 MGC134015 RAD18 homolog (S. cerevisiae) EMBV3_30293 TACCAGAGTCTCAAACCTCAGGAGAGTCAGGACCCAGAACAAGGAGACCAATGCAGACCT Gene GeneID:519276|LOC519276:XM_002695649:95_cdna Constitutive 0 NULL GeneID:519276 19 GENE LOC519276 NULL similar to matrix metallopeptidase 28 (epilysin) EMBV3_10793 TTTCGCGCCTGTTCTGTGACGTCACTGCAGAAAATGTGGGACCAAGAAAAGGACCACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06519 GTCCAGATACAACCTGGGGATAAGCTGCATCAACCTGGGCGCCTACAGAGAGAAACAGAA Gene GeneID:531027|PEX5L:NM_001075943:17_cdna Constitutive 0 NULL GeneID:531027 1 GENE PEX5L MGC139598 peroxisomal biogenesis factor 5-like EMBV3_20184 AGGGCATCAAGAATCTAGTCTGGGTGGACTCCGATCAGCTCCTCTATCAGCACTTCTGGT Gene GeneID:510127|MRPL37:NM_001083400:40_cdna Constitutive 0 NULL GeneID:510127 3 GENE MRPL37 MGC137776 mitochondrial ribosomal protein L37 EMBV3_04243 CCTCAGGATACGGATGCTCTGTGACCTACCAGCCAACCCAGGACCCGGTCATCCAATAAA Gene GeneID:526092|HS1BP3:XM_002691514:512_cdna Constitutive 0 NULL GeneID:526092 11 GENE HS1BP3 MGC127678 HCLS1 binding protein 3 EMBV3_37671 CAGCAATCTACTTCTGCACCACCCACTGCTAAACTGTACAACGGACTCTATTTCCAAGGG Gene GeneID:506290|IQCK:XM_002697981:43_cdna Constitutive 2 NULL GeneID:506290 25 GENE IQCK NULL IQ motif containing K EMBV3_25198 CCTGCTCATTGGGGTCATCGTGTGGCATCGAAGGCGGCAACGCAAAGGACAGGAGAGGAA Gene GeneID:280986|AGER:NM_173982:27_cdna Constitutive 0 NULL GeneID:280986 23 GENE AGER MGC140817 RAGE advanced glycosylation end product-specific receptor EMBV3_38828 ATGACATTGTGCTGTATTTTGTAACTGGCTTGCTGGGTATTATTCCCCTGACTGGGATCC Gene GeneID:509267|LOC509267:XM_002688800:208_cdna Constitutive 0 NULL GeneID:509267 7 GENE LOC509267 NULL similar to olfactory receptor Olr1158 EMBV3_11671 TCATGAAGTACAACCAGCATATGCTACAAGGTGAAAAAGGTGTGAGGGTTGAACTCAATA Variant GeneID:534075|EGLN1:XM_002698782:132_cdna 255^322 1 EMBV3_07324 GeneID:534075 28 GENE EGLN1 NULL egl nine homolog 1 (C. elegans) EMBV3_40464 TCCAACCCATCTTCTAACCTGAAACCTCGGCCAGCCACTCCCAGATCCTTGAACTCCTTT Gene GeneID:534551|HSPB6:NM_001076027:685_cdna Constitutive 0 NULL GeneID:534551 18 GENE HSPB6 HSP20 MGC140541 heat shock protein, alpha-crystallin-related, B6 EMBV3_04869 ATCTCCGCTGTCATCACACACCCAGACTACCAGCCCACCACGCACACCAGTGACATCTGT Gene GeneID:515368|PRSSL1:XM_002689162:187_cdna Constitutive 1 NULL GeneID:515368 7 GENE PRSSL1 KLK10 similar to protease, serine-like 1 EMBV3_19800 TGGTGCTAGACAAGGACATGGCCGAGGAGGCTGGTGAACATCGGCTCCTCCTACAACTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02760 TGGAACAGTTGTTGGACAGGTCCTAGCAGAGAAATTGGGGTTTCAACAAGGAACCCACGC Gene GeneID:782909|LOC782909:XM_002689753:18_cdna Constitutive 0 NULL GeneID:782909 8 GENE LOC782909 NULL similar to chromosome 9 open reading frame 79 EMBV3_22592 ACCCCAATGAGCTCTATGTCAACCACAGAGGCAAAGATCATGCCAAGTTTTCACCTGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43488 GGCCACACCCGATACTTTCAGACCTACTTTCTCACTCCCTCCGTGAAGCTCTGTGACTGT Gene GeneID:532528|GNL1:NM_001103272:150_cdna Constitutive 1 NULL GeneID:532528 23 GENE GNL1 MGC142905 guanine nucleotide binding protein-like 1 EMBV3_36636 GCTTATTATTGGTCCTCCAGATACACTTTATTGATAAAAATGGTGATGTATGCATTTCTA Variant GeneID:613676|UBE2G1:NM_001082458:171_cdna 460^557 3 EMBV3_33358 GeneID:613676 19 GENE UBE2G1 NULL ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) EMBV3_32584 TTCCACTTTCCGGGTGTGGCCGCGAGTCGGTACATGGAAAAGAGGAACAAGAGCAGGGAG Variant GeneID:614078|C18H16ORF61:NM_001113175:62_cdna 131^315 3 EMBV3_41605 GeneID:614078 18 GENE C18H16ORF61 MGC137594 chromosome 16 open reading frame 61 ortholog EMBV3_01872 GCTCAGCCTGCTCAGAGCAAACCGCAGAAGACAGCCGCTCCGACCGCTGGTCCCAGATGC Variant GeneID:533851|PDLIM7:NM_001017947:37_cdna 529^647 2 EMBV3_04422 GeneID:533851 7 GENE PDLIM7 NULL PDZ and LIM domain 7 (enigma) EMBV3_29441 TGGAGGATGAGTAATGCCCACGACCTGCCCTTACCGTGCCAAGCAGGAAACAAATTCTGA Gene GeneID:513684|TCIRG1:NM_001075634:613_cdna Constitutive 0 NULL GeneID:513684 29 GENE TCIRG1 MGC137911 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 EMBV3_20586 TTCGAACTCTGGGATCTTCTCTCCCAGCCTCCATTTGTTCGGCTGTGCCAGGGAAGTAAT Gene BVV0102_189293 - 0 NULL GK000018.2:36029642-36095733 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083014 1 XLOC_051162 Coding TCONS_00083014 XLOC_051162 Coding Coding CDH3 18:36094290-36142540 j TSS62495 5524 1 TCONS_00083014_7 631 0.0782041998551774 16 0.885842193620593 0.000459218882900022 0.00042978272080946 0.000417891873802432 0.000351792098427134 0.000119146922334721 2.47399075653864e-27 4.04891311876951e-05 9.63894670631556e-60 0.000252393557534504 2.07560712594816e-05 1.85812495073045e-42 1.03463480209855e-29 0.000287727075287916 1.05430672809228e-05 6.4814139536717e-05 2.20253854156152e-05 1.64617443551531e-24 1.51483569156142e-21 0.000193933354943055 0.000270210209142456 2.13277684011771e-69 8.62164321232103e-23 5.37682061330859e-15 1.41085679495194e-13 4.18767843514179e-05 6.91265829927992e-05 0.000289494559315388 8.86411027307029e-31 5.16522769893853e-15 2.98464115634057e-14 XM_005218437.1 CDH3 PREDICTED: Bos taurus cadherin 3, type 1, P-cadherin (placental) (CDH3), transcript variant X1, mRNA. 0.0 5671 99.43 0.572773352643012 NM_001793.4 CDH3 Homo sapiens cadherin 3, type 1, P-cadherin (placental) (CDH3), 0.0 3220 82.94 0.556118754525706 TCONS_00083014_7 sp|P22223|CADH3_HUMAN CADH3_HUMAN Cadherin-3; 0.0 1068 89.22 0.998415213946117 2 coding 0 0 0 0 0.0872760236841211 0.482577905626091 0.0111372492582656 0.807753530495946 TGAGGGCCAAAAAAAAAAAATCTATACTTAGAGACTGCAGTCTCTTCCTCAAACCTCTGAATGTGAAATGGGGAGAAGAGAGAAAAGGGATGAGGATTCAGCCTGAAATTCTCAAGACAGCTAAGGAAAGTGGGAAGGGCTCCGGGAACAAGAGGCTGGGACTGGCCGGGAAAGCTCAGCTCGGTGCGGAGACGGCGTGCACTGTGGAGCGACTGAGTCAGGACCGTTTCAGGGCCCATGGCCCATTTGCGTGTCGCCAGGGGAAGGGCACTTTGGGTATGCAGTCGAGAGACGAATTCCGCCCAGCTCCGCCGTCTGCTCCCGGGAAGGATGCAGAAGAGCTGTTTTGAAGGGAGGTTCACGGAAAGGCTGCTCCGCGCAGCCAGCATTTTTCACTTAGATTATACTCAGTACTGCAGACCAATAAAAACAGTCGCGATTTAAAAAATGCCTTTATTTGCGTTTTCACAAGTTGAGAAGTTGTTAATTATGTATCTGACGTGGGGGGGGGGGTGGGGGAGGTTGCCTGAGATGCTGGGATTAACAACCACCTCTCTGCCTCGCACCTTTTGGTGTCACCACGGCTTCGAACTCTGGGATCTTCTCTCCCAGCCTCCATTTGTTCGGCTGTGCCAGGGAAGTAATGAGTCTTCCGTGAGTTGTAGCAGATTTTGTAACGGTCCCTGGTGACCTCGCTGCCAGTTTTAAACCCTGGAGACCTGGGAGCAGGCTGACGTGGGAGGTTGGAAAGAGGCAGGAGGTACCACCCCCCGCGCGCCCCCGCTGTCGCCGGGTGTGGGACGGACACACCCGGCCTCCATCAAAGCTTTGGGTAACAGAGCGCCTCAGGCACAGGTTTACTGGCTGCCGCGCGCGGCCTCGGAACCGTGCCGGGCAGGCTTCGGGGAAGCTGAAGTGACCTTGGAGGCGCGAGGCGCGGAGCTGGAGCCGGGCCAGGCGCTGGGAAAAGTGGTCTTCACAGACTGCCCTGGGCAAGAGTCGGCCCTGCTGACTGACGATGACTTCATTGTTCTGAACGATGAAACAGTCCAGGAAAGGAAAGCACTGAAGATCTCCCCACCCGCACCTGTCTTACGAAGGCGCAAGAGAGAATGGGTGGTCCCGCCAATATCTGTGCCTGAGAATGGCAAGGGTCCTTTCCCCCAGAGGCTGAATCAGCTCAAATCTAATAAGGACAGAGGCACCAAGATTTTCTACAGCATCACGGGGCCTGGGGCAGACAGCCCACCAGAGGGTATCTTTGCTATAGAGAAGGAAACAGGCTGGTTGTTGCTGAATAAGCCACTGGACCGGGAGAAGATTGCCAAGTATGAGCTCTTTGGCCATGCTGTATCAGAGAACGGCGCCTCTGTGGAAGATCCCATGAACATCTCCATCATTGTAACAGACCAGAATGACCACAAGCCCAAGTTCACCCAGGATGTCTTCAGAGGGAGCGTCTTGGAAGGGGTGCTACCTGGCACTTCCGTGATGCAGGTGACAGCCACGGATGAGGACGACGCCGTTAACACCTACAACGGTGTGGTTGCTTACTCCATCCACAGTCAAGAGCCAAAGGACCCGAATGACCTCATGTTCACAGTCCACCGGAGCACGGGTACCATCAGCGTCATCTCCAGTGGCCTGGACCGGGAAAGAGTCCCCGAGTACACACTGACCATCCATGCCACAGACATGGATGGGGACGGCTCCAGCACCACGGCTATGGCCATAGTGGAAATCCTCGATGCCAACGACAATGCTCCCGTGTTTGATCCCCAGAAGTATGAGGCCCGTGTGCCTGAGAACACAGTGAGCCACGAGGTGCAGAGGCTGACAGTGACTGATCTGGACGCCCCTAACTCACCAGCATGGCGTGCCACCTACCGCATCGTGGGAGGTGACAACGGGGACCATTTTACCATCACTACTGACCCCGAGAGCAACCAGGGTATCCTGACCACCCAGAAGGGCTTGGATTTTGAGGCCAAAACCCAGCACACCCTGTACGTCGAAGTGATCAACGAGGTTCCCTTTGTGGTGAAACTCCCGACCTCCACAGCCACCGTAGTGGTCCTCGTGGAGGATGTGAATGAGCCACCCGTGTTTGTCCCCCCGTCCAAAGTCATCGAAATCCAGGAGGGCATCTCCACTGGGGAGCCTATTTGTGCCTACACTGCACGGGACCCAGACAAGGGGAGTCAGAAGATCAGTTACCACATCCTGAGAGACCCAGCAGGGTGGCTAGCGATGGACCCAGACAGTGGACAAGTCACTGCCGCAGGGGTCTTGGACCGTGAGGATGAGCAGTTTGTGAGAAACAACATCTACGAAGTCATGGTCTTGGCCACAGATGATGGGAGCCCTCCCACCACTGGCACAGGGACCCTCCTGCTAACACTGATGGACATCAATGACCACGGTCCGGTCCCCGAGCCCCGTCAGATCACCATCTGCAACCAAAGCCCTGTGCCCCAGGTGCTAAACATCACAGACAAGGACTTGTCCCCCCACACTGCCCCTTTCCAGGCCCAACTCACACATGACTCGGACGTCTATTGGACAGCAGAAGTCAACGAGAAAGGAGACGCAGTAGCCTTGTCCCTGAAGAAGTTCCTAAAGCAAGGCGAATACGATGTACACCTTTCCCTGTCCGACCACGGCAACAAGGAACAGCTGACAGTGATCAGAGCCACCGTGTGTGACTGCCACGGCAACATGGTGACCTGCCGGGACCCCTGGACGTGGGGTTTCCTCCTCCCCATCCTGGGTGCTGCCCTGGCTCTGCTGCTCCTTCTGCTGGTGCTCCTATTCTTGGTGAGAAAGAAACGGAAGATCAAGGAACCCCTTCTCCTCCCAGAAGATGATACCCGTGACAACGTCTTCTACTACGGCGAAGAGGGGGGTGGCGAGGAGGACCAGGACTATGACATCACCCAGCTCCACCGGGGTCTGGAGGCCCGGCCTGAGGTGGTTCTCCGCAACGATGTGGCACCATCCTTCATCCCCACACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTCATCATTGAGAACCTGAAGGCAGCCAACACAGACCCCACGGCCCCGCCCTACGACTCCCTGTTGGTGTTCGACTATGAGGGCAGTGGCTCCGATGCCGCCTCTCTGAGCTCGCTCACCTCCTCAACCTCTGACCAGGACCAAGACTACAACTATCTGAATGAGTGGGGCAGCCGCTTCAAGAAGCTGGCGGACATGTACGGCGGGGGCCAGGACGACTAGGACTCCCTAAACGCCGGGCTGCAGCAGCGTCTCCAAGGGGTCACTATCCCCACGTTGGCCAAGGACTTTGCAGCTTGTTGAGAATTGGCCTTAGCAACTTGGAGGGAAGAGGCCTCGAAACTGACCTCAAAGGGGCAGGTCTCTATGCCTTTCAGAACGGAGGAACGTGGGCAGTTTGATTTCAACAGTGAGCACCTCTTAGCCTAAGCCAGGGCTGCTCAATTTCTGGGAGTCTCCTCGCTACCATAAAATGCTCAGCGCTGGGTCCTGGGTTTTGACTGACTCTGACTTTCCCATGATGGCTTTTGCTCTGGAATGGACCCTTCTCCTTAGTAACAGGCCTCTTACCACAATCTTCGTTTTTTTTTTTTTAATGCTGTTTTCAAAAAGTGAGAGGCAGGTCCTCAACCACCCCCTGGAGCGCTCCAGAAGCCCAGGCGTGCCCTCATGCATTTCTCTGTGGTCTCTTGGCCCCCAGACCTCCTGTTTGATTGGATAACTGCATTTTTATACTGAGCACGTCTAAGTGGTCCTTTATTTTTTATTTTCCCTATCGAGTGCTGTAGATGAAGAGTGATGACAATCCTGTAAATGTACTAGAACTTTTTTATTAAAGGAACTTTTTCCCAGAGGTGGCAGGGGAGTGAAGTTTTGGGGGTTTTTTAATAGTTTTGTTGACGTATAATTCACATATCATATTCACTCATGTAAAGTGTACAATTCAGTGGTTTTCTAGAACTTGCAGTTGTGTGGAGTTGTGCTTTTATCCCTGTGGGCTTCACCCCAGCTTCCTCCTGATAGTAGTGGAAGCTCAGGATGTGTTTACAGACCTGGGAGGAGGCAGACGTCAGCTCGCCGACCTACAGATGAGAGCTGCTGTCCCTGTGTGAGAACCATTAACTTCCTTACTCCTGACCGAGCCGCACCACAACTGCAGTACTGGGAGATTTCCTCTTTTCTGGACCAGCAGTATGGGGAGATTTCCTCTTTGTGCTGTGGACTCTATGTTGAAAGGCAGGATGTTTGCAGGGTGGCGGGGGTAGGGGAGGGTGGGGTCCAGCTCTGCTACTTCCTAGCAAGTTGCTTAACCTCTACCTGCCTCAGGTTTTTCATTTGTAAAATTGGGAGTTTCCATGGAGATGAAGTGAGTTCATATCCAGCACATAGCAGGTGCTATCCGTGTTCATTGATAACAGCCACCGTTAGTCAATACTTTTTAGATCCAGACAGCACTTAACTTCCAATTATTTCCTTTCAACAAATCCTCACAATCACCCGCTGAGGGAATCTTCCTCATTTTAAGAACGGCCTCATTTTATTTTTTTGTTAAATGACACCTGTTTGTCACCAGAATCAAGCCAGAAAATTAGAGAACTCACCCAGGATGTCAATGAAATTAGAATATTCCGGGCAACAACAGGGCACAGATGGCAGGATGAAGAGGCAGCAGGAATTCCACGTGTGCCCTTGTTAAAGCAAAGTTTTAAATTTATCTTTACAATGAACTAGAAGAAAAGAATCTGAAGTGCAGCCGCGAAAATCACTGAAGTGGAAATAGATGTCTCCTTCCTGCGAGAGAATGACTGATTCTGTAAAGAAATGGTACTCCAGGGGGCCGTCCCTGGACCAGCAGCCTCAACACCACTGCCGAACCAGCAACTGCAAGCAAGCGAGACCCTGCAGTCTGATCTGACAAGCCTTCCAGGTGATTCTGATGCCCACGCAATTTAAGATTGAGACTCTGAAGAGTCCTAAAGATTGAAGGCAGGAGGAGAAGGGGATGACAGAGGGTGAGATGGTTGGATGGCATCACTGATTCGATGGACATGAGTTTGAGCAAGGTCTGGGAGTTGGTGAAGGCAGGGGAGCCTGGCGTGCTGCAGTCCATGGGGTCACAGAGTCAGACACGACTGAGTGACTGAATTGACTCTGAAGGGTGAAGCTGTGGGTGTCCTGAAGCCTCAGATTCTGGATGGGGAAGTTTAAAGGGAACAAAGTCTGATAAGAAAGTGTCTCACCCACCCTAGGTCCACAGTGCCTCAGCCCACGCTCCTGGCTGCCTCCTGTCTCTCCCTGGAGCTGCAGCCTCTGACTCCCTCAACCTCAGCGTCCCCCCTACCAGGGCCCTGCAGCTCTTGCTGATAAGGTTCTGTGGGAAGAATTAAGTGTCTCAACTAGCAAACACCTGCTGCCCATTATCTTAAACTCCTCTCTGAGAAGCCTGAATAAAGCCTGAAACCCTGTA EMBV3_20441 AAGCCCAGGGGGGTTCATCCAATGGTCCCTACTCCAACCCTTATGAGAACAGCCTCATCC Gene GeneID:281144|EPOR:XM_002688847:177_cdna Constitutive 0 NULL GeneID:281144 7 GENE EPOR NULL erythropoietin receptor EMBV3_41465 GCAGCAGCCTTTGGCACATCCTGTCACTCTTGGCTTCAACTCCTTTCTCTTTAAAATGGG Gene BVT0102_121319 - 1 EMBV3_28558 GK000022.2:48247820-48264564 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37726 TCTTTGTCCTATTTGATGAGGACCGCTTCGGGTTCATCTGGCTGGAGCTGAAGTCCTTCA Gene GeneID:513951|FBXO31:XM_002694853:787_cdna Constitutive 0 NULL GeneID:513951 18 GENE FBXO31 NULL F-box protein 31 EMBV3_35411 CCCATCAAAGCTCCTGAGTCCGTTTCCACCATAATCACTGCAGAATCAATCTTCTACAAG Gene GeneID:784921|GATAD1:NM_001081623:19_cdna Constitutive 1 NULL GeneID:784921 4 GENE GATAD1 MGC149035 GATA zinc finger domain containing 1 EMBV3_03106 TAAGATCAAGGTGAACCTGCCCAGAGACAACCAGCCAGAGAACCCCTACACAAGGCACAT Gene GeneID:100295610|LOC100295610:XM_002684796:153_cdna UTR3_Alt 2 NULL GeneID:100295610 1 GENE LOC100295610 NULL similar to mucin 13, cell surface associated EMBV3_37234 ATGGGAGCAGTCAAAAAGAACAAGAGGTGAGGTATTTTGTGGGCAGAAATCAAATGAAAG Gene BVV0102_151991 + 0 NULL GK000006.2:60806391-60848685 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203296 1 XLOC_124146 Coding TCONS_00203296 XLOC_124146 Coding Coding N4BP2 6:60754772-60809556 j TSS152325 7465 1 TCONS_00203296_6 1767 0.0230408573342264 17 0.864045415548619 5.1741692951309e-05 1.47179521216707e-05 1.3529575354978e-25 8.20207348583147e-82 7.95475473260029e-22 3.36547186412845e-29 2.94794426138864e-24 9.50295472627776e-50 1.35221821479556e-05 0.00014745462910252 0.000266933523510515 0.000200885142258218 0.000135738384957022 6.34013720083013e-18 1.65941100958744e-34 0.00221898972420056 0.00165358560588269 0.00122454334977273 2.09623063932064e-24 1.75000863006226e-23 2.05968836783142e-43 0.000247986642009703 0.000840218904455667 0.00225909194967547 3.02457158690241e-05 3.89848249310338e-49 4.79015462341185e-71 9.51228847246138e-05 2.30277021681941e-05 2.23850140170486e-05 XM_005198611.1 N4BP2 PREDICTED: Bos taurus NEDD4 binding protein 2 (N4BP2), transcript 0.0 9669 100.00 0.718017414601474 NM_018177.4 N4BP2 Homo sapiens NEDD4 binding protein 2 (N4BP2), mRNA. 0.0 6359 86.19 0.71828533154722 TCONS_00203296_6 sp|Q86UW6|N4BP2_HUMAN N4BP2_HUMAN NEDD4-binding protein 2; 0.0 2795 80.51 0.999434069043577 3 coding 0 0 0 0 0.0393438726355501 0.747098402600505 0.0150975497352954 0.811602783798905 GAGACATTTTAGTTTTGGAAGTCAGAATGCCAAGGAGAAGGAAAAATCTTGGGGGAAATCCTTTTCGGAAGACCACAAACTCTAAGGAAGTTGTATCCAGTGTTACTAGTCATGAGGAGCCAACCACTACTCTTCCTTCCGTGTATGAGACAAAGGTTGATCAGGAAGAACTCTTCACCAGTGTCTCAGAGATGTTTTCTGATCTGGATCCTGATGTAGTGTATTTGATGCTTTCTGAATGTGATTTCAAAGTTGAAAATGCCATGGATTGTCTATTAGAATTATCAGCCACTGATGCTAAGATAGAAGAATCGTCTTCAACAAACTTCATTGCTTCTGAGAAACAAGTAAATGCAGTGAAATGTGAAATAATGGAAAAATGTCCTCCAAAAGAAGAGAGTGAAGATTCAAAAATGGATTCATTTTTGGACATGCAGCTAACTGAAGATTTAGATTCTTTAATACAAAATGCTTTTGAGAAATTGAACTCTTCTCCTGATAACCAAGCATACTCATTTTTGCCTTTGCAAGATGTTAATAATTTTAGTGACCCGAGTTCATTTGTAAGTTCAGATTCAAGTAATATGACTCCCATTCTTTCTACCCAAAATATGGATTTGAACAATGAAAATTTAGAGCTTTCTGTCTCTGCATTAAGTTCAAATTCCTTAACTTCACATTCAGTTTCAAATGGGTCCAAAAGTTTTACAAAAGATAACACAGTGGCATTGGAAGATTCTCTTCTCAGTAGTTCTTTAAATGCAGATAATGACACTTTGATGGATGGCAGCAACCAAATTCAGAAAGAGCTTTCGGAATCTGAGTGTGTTAAGACTCAGTTCTCTCAAGCCCCTGTAGATTTGGATGCTAATGAGCTTCAGGCTCCTCTAAACCTTGCTGTCCAAAATCCAGGGATTGGTTTAATAGGTACAGGTGGAGATCAGAAGTCCACGTCTGTCCCTGATGTTTTTGTACCTTCTGAAGAATTCAGTTTCCAGCCACACAAACATACTGAACTGCCACCAAAGGGGAAGGATGTGAATTACTGCCCAGTACTAACCCCTCTCCCTCTACTGCTGCCTCCTCCCCCACCTCCACCAATGTGGAATCCAATGATCCCTGCTTTTGACCTCTTTCAAGCCAACCATGGCTTTGTGGCTCCTGTTGTAACCACAGCTGCGCACTGGAGGCCTGTCAACTATGCGTTTCCACCCCCAGTGATTTCTCATGCTTCCCCCACAAAGGTGTGGAGAAGCAAAGAGGGAGCGAGTGCTTACCAGGTACAAGAAGCTCCAGTTTCTCAGGCTGTAAGAAAGAAGACATCATCTTATGTTGGACTAGTTCTCGTTCTTCTCAGAGGCCTTCCAGGATCAGGAAAATCTTTTCTGGCAAGGACTTTGCAAGAGGATAATCCAAGTGGAGTTATTCTTAGTACTGATGATTATTTTTACATAAATGGACAATACCAGTTTGATGTAAGATACTTAGGAGAAGCACATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGGTGTCTCCTGTAATAATAGATAATACAAACCTACAGGCATGGGAAATGAAACCATATGTTGCTTTGTCTCAAAAACATAAATATAAAGTCCTTTTCCGGGAACCGGATACATGGTGGAAATTCAAACCGAAGGAACTTGCAAGGCGTAATATTCATGGGATAAGCAAAGAAAAAATAACAAGAATGTTGGAACACTATCAACGTTTTGTTTCAGTGCCAATAATCATGAGTTCTTCAGTTCCAGAGAAAATCGAACGCATTGAATTGTGTGCATATTCTTGTGACAGAAGTACTAGCCCAAGAGACAATGAAGATATTACTTCTGAAAAAGAAGAAAATGTTTTATCCTCGTCTTTGAAGCATCTAGAGTTAACTGAAGAGAAGAAACTTGATGTGACCAAAGAAAATATGTTGCCTGAGAATATTGCATATCTCCCTAACGCAGATTTAAACAAAGGAAAAAAAGAAATAAGTGATATGAATCCCAATATTCAGAATGCTTTCATTCAGGAAGCTCCAAACACATACTTTCCTGATTCTGAAAGTGAAGTACAAGTTACAGACAAAAGTGAAAAAGAAGAGCCAGTAGAAATGGCTCTTGAAAAAGAGTGTAGTGAAACCAATGCAGATAGTTTGTTAGAGAGAATGTCACCAAGTAGTTGTTATGGTGAAAATAATCAAGGGGACTGTGGTCTTTCAAATCCTGTACCCAATCAAAATGAAAAATCTTTATCTAGTGAAATATTGGAAGAAAGAGCGGCAGTAAAGAAAAAAGCCTTTGGAAAACAAAAGAGCAAATCAACTTTGGAAAAGTTTCCAAAACACGAGCTGTCTTTTGTTGGTGACTGGCCAGTTGATAAGACTATTGGTCAGAGGACAAAAAGGAACCGAAAAATGGAAAAAGCCTCATCTGTACAAAATGACAAAAAGTATAATCGCCCTCAGTCACATAAAATATTAGATAATAGTTTATCTGTGAGTGTAGATTGTATGCAGCCACAAGGACCTCCATATGAAAATGTAGAGGATGACGACAGGTCACAGTGTGGTGATGCCTCGGAACCTTTCAGTAGCTGTGAATATGATACTTACAAAAACCCGGAAAGAGATTCATTCAACATTGTGGGTGACTGGCCTTCCCTCGATTCGTTAGCTCAGAGAGAGCACAGATCAAGAATACCAAAGGCTGGCTTAAATGAACCCAGCCTAGAATTTGGAACCAACAGCAGTATGAATGAAATATCCTTATACTCTTCACATGAGGCCTGTTGGGGCACAAGCCCTGAAGAGCTAAAAACATTGGGTGGTTGTACTCGAGGAAGTTCTGAAATGTTGCCCAATGAAATGACCTATGAGAGTAAGACTTGTCCAAGTAAAAAGATTCATAGGGAACACACATTGTCTCTTCCTTATATCAATAGTGTGCCAACTGTCCCTGAAAAAATAGGACCACAAACTTTAGCTGAATTTTCAGAAGAAAAGACTAAAGAAGTCCCTGAAATAGGAGTAGGCATGTGTACCCAGACTGAACCACAGGATTTTGCTCTCTTATGGAAAGTAGAAAAAAATAAGATTAGTGTTTCTGATTCTCTGAGAGTATTAACAGGAAGATTAGATGGATTTAAACCCAAAACTTTCAATATTAACACAAAATTGGATGTTCAAGAAGCAATTCCATATAGGGTAATGTATGACAAAAGCACATATGTGGAAGAAAGTGAGCTCACCAATGCTGATGAATCTGAAAATCTTAACATTCTTTGTAAACTATTTGGATCTTTTTCATTAGAAGCCCTAAAAGACTTATATGAGAGGTGTAACAAAGATATTATTTGGGCCACAAGCCTTTTATTGGATTCTGAAACCAAATTATGTGAGGATACTGAATTTGAGAATATAAAAAAATCATACGATGAAGCACAAATTGGGCCATTTTCTCTGGGACTGAATTTGAAGGAAATTATTAGCCAAAGAGGAAGCTTAGAGGATTCTAATTTTTCTGTGCCAGAATTTAGCCATGGAATTGATATCAATAACACTAATGTACAATCTACCTGTAATTCCAAAAAGGAGAACTTAGAGCAGGCAGAAATAAGAGCTATAACTACTGAAAAACATGGATTAGTAACAAGTATACTTCCTACTGTAGAGCTAAATAATAGTAATGAAGTACTTGCTAATAGTCAAACAGAACTTTCAGGTTTATATAATGTGAAGCAGTTTTTTCCAGATACTCTAAAAGCTACTACCACTAAAACTGTGAGTGAAATGGAAAAGAATTCAGAAGTTGCAGAGACTGGAGGTAACATACCTTCTTCTTTGAATTTGTCTGACATTTTGAACTCTGTATCAAGCACTTCAAATCTTGAGTTACATGAAGAAACTTATTTTACTAACTCTTTTGAAATAAATAAAAATGAAAATCTTCCAAAGGACTATGTGAAATTTCCAAACACAGAAGAATTTATGATTGAAGAGGAACAGGAAATGGAGACAATTCTAATGGCAGGGAGTGCTTTGTCAGCTGGAGTTACTGGAGAAGATAAAGCTGAGACACTGAATCCCACTCCAGTGACAACCAAATCTCTGACCATAGACTGTCTTGAATTGGCATTGCCCCCTGAACTGGCTTTTCAGCTCAATGAATTATTTGGCCCTGTTGGTATTGATTCAGGGTCCCTAACAGTTGAGGATTGTGTGGTTCATATAGATCTGAATCTGGCTAAAGTGATTCATGAGAAATGGAAAGAATCTGTAATGGAGCGACAAAGACAAGAAGAGGTATCTTGTGGCAAGTTAATGCAAGATCCTTCCCTGTTTGGGCATATTGGTCTTGATAATTCAGAACAAAAATCATCTCAGAGAACAGGCAAAAAATTACTGAAGACTTTAGCAGCACCTGAAATGCTACCCTTATTGGATCATTGGAACACTCAAACTAAAAAAGTATCACTCAGAGAAATAATGTCAGAAGAAATTGCCTTACAGGAAAAGCATGATTTGAAAAGGGAGACGCTTATGTTTGAGAAAGATTGTGCCACTAAGCTAAAGGAGAAGCAACTCTTTAAGATATTTCCAGCCATTAACCAAAATTTCCTGGTGGACATTTTCAAGGACCACAACTATTCATTAGAACACACAGTGCAATTTCTAAATTGTGTTCTTGAAGGAGACCCTGTAAAAACAGTGGTAGCACAAGAATTTGTTCACCAAAATGAGAATATCACTTCTCATACTGCACAGAAGTCTAAGGAGAAAAAGGCAAAGAAATTGAAAGAGACTGAAGATATACCAAGTGAACCATCTTTCCAGGACTTTGAGTACCCCGAGTATGATGACTACAGGGCAGAGGCTTTCTTGCACCAGCAGAAGAGGATGGAATGCTACAGCAAGGCAAAAGAAGCTTATCGGATGGGGAAGAAAAATGTTGCCACATTTTATGCCCAGCAGGGTAGTCTCCATGAGCAGAAGATGAAAGAAGCTAATCACCTTGCTGCCGTGGAGATATTTGAGAAAGTCAATGCCTCCCTACTGCCGCAGAATGTTCTAGACCTCCATGGGCTGCATGTGGATGAGGCTATAGAACATTTGACAACAGTTTTACAGCAGAAAACTGAAGAATTTAAGCAGAATGGTGGTAAGCCCTATCTCTCTGTGATAACGGGGAGAGGAAACCACAGCCAGGGAGGAGTTGCACGCATCAAACCAGCCGTCATTAAATACCTCACAAGCCATAACTTTAGATTCTCTGAAATTAAACCAGGGTGCTTGAAAGTCATGCTAAAATAAAACAAACATCCTTGACTAAAAAGTGTGAAGTTTAAAAAAAAGACATCGCTTTTGAGTGTTTCAACTAGACTTTATTTCAATATTAGTTATTATAATTATGATTAATATGGGAGCAGTCAAAAAGAACAAGAGGTGAGGTATTTTGTGGGCAGAAATCAAATGAAAGAACTTATGTTTTGAACTGTACCAACTCTAGTTTTATGCTTTATTTTGGTAAATCTAGGGCATTTCTTCTTAATCATCATTCGTAAATATATGGAGAAATATTGAGCATTATAAATGTTTTTGTAAAGTTGTTTAGTATCAAATTGGCTTCTATCCCACTATCTAGCATAGTTTAAGCAACATGTAATTATGAAAGAAAATTTTATAATGGCTCTTTTCTTGTTTTGCCTGTTTCTAAATCCTGTATGCCAAAGGTAAACAGAGTTTGAGGATTATCAAATTTTTCTCTTTTACTCATTTCTAAATCCTGTGTGTCTAGATAATGAGGGGCTTATCAGAGTTTTTGTGTATGTTTTGGTATATTTGTGCTAATATATATGACTTACTAGAATGGCTCTTTGCAAAGTTATTAATATTTAAGAAATACAACAGCTCTGTAATTTTGGAAGATTTTAATAACAATTATATTCTTTCAATAGTCTCTTACCAGTATCTCCCAGGGGACGATGAGCACTAATGTGGAAACCACAGGGAAAGCGGGGTTGAACAGAAGGGACTCTTAACAGTATTTTCAGTCTGTTCATTTCCTTCCTTAAACAGGAGAAATGGAAGTATTTTGTTTTACATTTATTGGCTGTTCATGTATCTCTATATTATTTCAAGTTGAGATTTATTCATGTATTAGTGTTTCAGTACTGCCTGAAATTCTAAGGCCTTTAAATGTGGGACATATTGTATAGTAGAAACCCTGACTTAACACTTTAAAGTGTCTTGTGTATTATAACACATTTTGGAGAGAAAAGCTAAATAATTCTGTTGGATTGTTTCCAATCCTTTATTTTGTCCTTTTTAAATTCAAGTGTTTTGTATGCTTAGAAAAAAGATATATATAATAGCAAGATTGCTTATTTCTGAGCTGGAAATTGGAAACTTTGAAACTCAGGAAATTGCTCTGACAATGTTTTAACTGCTCTCAATTTAAGAAAATGACAAAATGTATAAAAAAGACACAAAAATAATGTGTGCTGTTTTTTCCAATTGCTTTTTTGTTGTGCAATAGAGGTGAAGTTTGATAATTTTTCTGTGTTGTGGTTAAATATTGCTTATTTTTATTTACATGGTAAAGAAAACAGATTTAAATGTTTTGTGTGGCCAAAAAACCTTGTCATTTAAAAGGTAAAGTAAGTTTAGGTAGAATTTATGTAAATGGTGCTTATTTTTAAATGTAATTCAAGTTTACAGTGTTACTTAATGTCTCTTTGCAAAATTTATTAGAGAAATAAGGCTAGAATGCATCTACATCCCGGAGAGTTTTTTATAACTTCACATTATATGATGACATTGTTTTCCTTAAAGTTGAGCAAATGACTTTTATGGTCCAAATGATGAAACCATTTATTAACATGTGATTGAGAATTAACCATGAGACTTCTCATTAAAATATAATATTGCAACTGTCAGTTGGAGAATATATTATAAGATTTTCAAACAGTCTATTAGAGACAAAATCCTTTTATTTGTACTATAAAGAAAATGTAATTTTGCTGTTAACTCTGTACTTTTTTATTGAAACTGTTTTATAACTTTGCTTTTAAAATTTCTTATGAAACCATTTGCAAATTACATACTTAATTTAATAAAATACATTAACCACTGCTCAATGTGAGGATATCCTTCATTTGGTGTGGTGGGGTTAGTGGTTTAAATATTAAAGTACATTTTTATGCATAACTTAATATTTAATATTTCACATGGTCACAATCTCCACTTCCCTCCTTCTCCCCTCCATTCAAGCAGTTAGGCCTTTCTTCTTCCATTACTTTAGGGGAAGGATTTGATCAGCAGAAAGGAAAACCAAAGGAGTGTTCCTAACTTTCATTTGCAAAAGCCTACATGCTTAGGGACCAGTAAAGACCAGCAGGACAGACAAAAGGATGAGACAGAGGACTTCCATCACTCCACTCCACCCC EMBV3_27714 TTATTTTAAAAGATGCACTTTGAGTTGCAATATGTTATTTTTATATGGGCCAAAAACAAA Gene GeneID:533166|SORL1:XM_002693087:438_cdna Constitutive 2 NULL GeneID:533166 15 GENE SORL1 NULL sortilin-related receptor, L(DLR class) A repeats-containing EMBV3_22107 TTCTGAAAACTGAAAGGGCAGGTAAAGTTGGGGTGATGGGAATCTTCTACAAACAATTAT Gene GeneID:509966|OLA1:NM_001046045:222_cdna Constitutive 0 NULL GeneID:509966 2 GENE OLA1 MGC137902 Obg-like ATPase 1 EMBV3_15964 TCAACAAGGTCATCAGTGAGCTCCACGGAAAGAACATCGAGGACGTCATTGCTCAGGGTA Gene GeneID:286853|RPLP2:NM_174788:221_cdna Constitutive 0 NULL GeneID:286853 29 GENE RPLP2 MGC133557 ribosomal protein, large, P2 EMBV3_15734 CTGTAGGTTCTCAGGCTGCTCTATCAGGCTAGTGGAGACATGTCTGAACCGAAACATGCT Gene BVT0102_200085 + 0 NULL GK000011.2:93064358-93068238 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00505 TCTCGGGGCTAGTTGTATTGAATAGAGTTTGGTATTTTGAAGATGACTTTCTTTTGTGAG Gene GeneID:538709|CLDN12:NM_001076123:13_cdna Constitutive 1 NULL GeneID:538709 4 GENE CLDN12 MGC139567 claudin 12 EMBV3_22449 ACTTGAGGGTGTGGACAGAAGTCTGAACTGGTGAAAGGTTACAGATATCAGCATGCCAGC Gene GeneID:524743|GTPBP4:XM_002692195:94_cdna Constitutive 0 NULL GeneID:524743 13 GENE GTPBP4 NULL GTP binding protein 4 EMBV3_01790 TTATCGAAACAGCTCCGGACAGCCAGGCCTTTGGCACCGTTCACGTCTATCCTGACAAAA Gene GeneID:534038|C19H17ORF48:XM_002695808:146_cdna Constitutive 0 NULL GeneID:534038 19 GENE C19H17ORF48 MGC165964 chromosome 17 open reading frame 48 ortholog EMBV3_32015 TCTTCACTCTAATTGGGGCCAGGTGCAGTTTCTCCTCTCCGTGAGCCTGGCAGACGCTCA Gene GeneID:280713|ADM:NM_173888:22_cdna Constitutive 1 NULL GeneID:280713 15 GENE ADM NULL adrenomedullin EMBV3_15097 TTTTGAATTTGAAGAAGGACCTGGTTTGTGGGGGCCCTGGGAAACTTGCGATCAGGGTCC Gene GeneID:531074|KIF14:XM_002694237:183_cdna Constitutive 1 NULL GeneID:531074 16 GENE KIF14 NULL kinesin family member 14 EMBV3_12526 GGTTGGATTGGACCGGCAGGCGAAGCTGAGCACAGTCTGGTCTGTCGTGAAGACTGTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01623 ATACGTGTACATGGTGGGTCCTCCCCTGGGACTCTCTCCTTACTGGTAGCTGTCCTATTT Gene GeneID:506127|SKI:XM_002694180:633_cdna UTR3_Alt 2 NULL GeneID:506127 16 GENE SKI NULL v-ski sarcoma viral oncogene homolog (avian) EMBV3_00059 CTAGGGTACATCATATGGTCATCACCATTTCTTACATCTGCCATCGTCATGAACATCTTT Variant GeneID:100271685|LOC100271685:NM_001145397:163_cdna 633^689 1 EMBV3_42008 GeneID:100271685 15 GENE LOC100271685 NULL membrane-spanning 4-domains, subfamily A-like EMBV3_22350 AACAGCTCCCAGGACACATTTGAAGCCTGCTACAGCGGCACGTCCACACCCTCTTTCCAT Gene GeneID:525479|LOC525479:XM_002692434:430_cdna Constitutive 0 NULL GeneID:525479 13 GENE LOC525479 NULL similar to Uncharacterized protein C20orf160 EMBV3_16042 AACAGCCAGTCCCGGATGAGCACCAACATGTAAGAGCAACCTCCGTCTCCAGGATGGTCT Gene GeneID:525572|GPS1:NM_001102094:102_cdna Constitutive 0 NULL GeneID:525572 19 GENE GPS1 MGC166130 G protein pathway suppressor 1 EMBV3_37369 TCTCGGTTATCGTAGCCTGTTCCCCCCGCGTGCGCCATCCTTCCGCCGCGGAAAGGCAGC Gene GeneID:100337173|LOC100337173:XM_002697849:589_cdna Constitutive 0 NULL GeneID:100337173 24 GENE LOC100337173 NULL hypothetical protein LOC100337173 EMBV3_33088 GGCATTCCAGAACCTTCAAACTTCCAAATACATCCCACTGCCCAGCATCTGAAGGAGCTC Gene BVT0102_083728 + 1 EMBV3_41343 GK000011.2:10651850-10676629 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08327 CCAGGCACTTTGAATCCCAGTCTGATGACCCACGCTTCCACGAGAAGAAGCAGATTCCAT Gene GeneID:526279|CASP7:XM_002698509:90_cdna Constitutive 0 NULL GeneID:526279 26 GENE CASP7 NULL caspase 7, apoptosis-related cysteine peptidase EMBV3_02782 AGATCACCAAGTTCGAGGAGCACGTGCAGAGCGTCGACATTGCTGCTTTCAACAAGATCT Gene GeneID:516473|EEF1D:XM_002692555:192_cdna Constitutive 0 NULL GeneID:516473 14 GENE EEF1D NULL eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) EMBV3_30261 GAAGCTCAACAGAGCTGCCATCCAGAGAGCCCGAGGGTCAGCTAGGATTTTGTTTTCTTC Gene GeneID:614834|CDS2:NM_001078046:41_cdna UTR3_Alt 2 NULL GeneID:614834 13 GENE CDS2 MGC142734 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 EMBV3_17069 GATGAATGGTGAGTATGAACACAGAAGACGGGAGAAAAGAGCTGGTCTGACGGTGGTGAC Gene BVT0102_268359 + 0 NULL GK000003.2:30423187-30533844 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39177 GGCCCTTGTTTTCTGTAATCCTGTTTGTGGGATGTGATTCTAAGTCCTGTTTTCCTCTCG Gene GeneID:618084|QDPR:NM_001076492:20_cdna Constitutive 2 NULL GeneID:618084 6 GENE QDPR MGC127076 quinoid dihydropteridine reductase EMBV3_34232 GTGGCCATATGTAACCCCTTGCGTTATGTCACCATCATGAGCAAAAGGGTCTGTGTCCAG Gene GeneID:526699|LOC526699:XM_002690449:317_cdna Constitutive 0 NULL GeneID:526699 10 GENE LOC526699 NULL similar to olfactory receptor MOR118-1 EMBV3_11595 AGGCAGAGTTCCCAAAAATAGCAAGGAGTGATAAGAAAGCCTCAGTGATCAATGCAAAGA Gene BVV0101_057785 - 1 EMBV3_33597 GK000012.2:62670238-63213642 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37100 ACTCTAGGAAGAGGGAATGAGGTGGTAAGAGAAACACCAGGGGACAGACTAAAGGAATGC Gene BVT0102_328232 + 0 NULL GK000026.2:13865366-13901144 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150095 TCONS_00150091 TCONS_00150093 TCONS_00150094 1 XLOC_091808 Coding TCONS_00150091 XLOC_091808 Coding Coding MARCH5 26:13814531-13867482 j TSS112523 3641 1 TCONS_00150091_1 174 0.0876132930513595 7 0.931369216241738 1.94373975031175e-09 0.000519629435256025 1.23884832245501e-07 4.44494758116911e-05 0.00112305583324368 4.66790953314748e-14 7.24068509580484e-05 0.00132208330005201 0.000940289690145189 0.000231772017949143 2.7452733551578e-09 1.77118197374942e-05 5.4176993275573e-05 1.9251343066998e-05 3.56274182204969e-05 0.000263516950895657 0.00198193090142196 0.000949569726606921 1.86535236851291e-15 2.04939459795257e-12 0.00023461516516674 0.000869895094649251 1.15037262997724e-10 1.51527305474636e-07 3.22062112267357e-08 5.21163725724243e-07 9.40720852449798e-05 7.58622719260108e-05 3.92796746292098e-20 1.0888890506178e-10 NM_001034715.1 MARCH5 Bos taurus membrane-associated ring finger (C3HC4) 5 (MARCH5), 0.0 2626 100.00 0.399615490249931 XM_005269924.1 MARCH5 PREDICTED: Homo sapiens membrane-associated ring finger (C3HC4) 5 (MARCH5), transcript variant X2, mRNA. 0.0 3739 83.54 0.980225212853612 TCONS_00150091_1 sp|Q3ZC24|MARH5_BOVIN MARH5_BOVIN E3 ubiquitin-protein ligase MARCH5; 3e-125 358 100.00 0.994252873563218 0 noncoding 0 0 0 0 0.137018561577316 0.334656703908192 -0.0280261373916798 0.610939143209448 CCGGTGAGCCCGGTCAGGGCCGGGCCCAGGACAATAGCACTGAGAGATGGAGGATTGAAGAGAACAAGGAAGTTGCTGGGTGTGTTTTGCCACTGATGAAGATGATAGAACAGCTGAATGGGTGAGACCGTGCAGATGCAGAGGATCTACAAAATGGGTTCACCAGGCTTGTTTACAGCGCTGGGTGGATGAAAAACAAAGAGGAAACAGTACAGCCAGAGTGGCATGTCCTCAGTGCAATGCTGAATACTTAATAGTTTTTCCAAAGTTGGGTCCAGTTGTTTACGTCTTGGATCTTGCAGATAGACTGATCTCAAAAGCCTGTCCATTTGCTGCAGCAGGAATAATGGTTGGCTCCATCTATTGGACAGCTGTGACTTACGGAGCGGTGACAGTGATGCAGGTTGTAGGCCATAAAGAAGGTCTGGATGTTATGGAGAGAGCTGATCCTTTATTCCTTTTAATTGGACTTCCTACTATTCCTGTCATGCTGATACTAGGCAAGATGATTCGCTGGGAGGACTATGTGCTTAGACTCTGGCGCAAATACTCAAATAAACTACAAATTTTGAACAGTATATTCCCAGGGATTGGTTGTCCTGTTCCTCGAATTCCAGCTGAGGCTAATCCTTTAGCAGATCATGTCTCTGCCACCCGAATTTTGTGTGGAGCCCTTGTTTTTCCTACTATTGCGACAATAGTTGGTAAACTAATGTTCAGTAGTGTTAACTCTAATTTACAAAGGACAATCTTGGGTGGAATTGCTTTTGTTGCCATTAAAGGAGCATTCAAGGTTTACTTCAAACAGCAGCAATATTTACGTCAGGCACACCGCAAAATCCTAAATTACCCAGAGCAAGAAGAAGCATAAAACTGCGACTTCTTGTTGTTCTGCAGTCCTCCCATTCTTAGGAGTCTGTTGTGTTCTGATTCCATCATTGATGCACAGTAATGGAGACTTGTAATAAGCTGCTGCTCTCATATTTTTAAGAAATATAATAAAGCACTTAGGGCAGGGGAAACCCTCTCAGTAATCACGGAACCTAAGGATATGATTTGTTTTCCTTGTTTTGTATGTACTTCTTTCATGGCGGTCATCTGAACCATTATCTTAGCATGGTGAACCTGAGTTTTGTTCATATTTTCCTCAAGACAGAAATGTAAAGATCAAACTGTGCAAATATTTAAAAATACACATGCTGTTTTATTCAAATGCCTCTTTTGTACATGTTCATGTTCAGTGTTTTCTTAGAATTAGCAACTCAATGAAGGTACTGTGAGGATTTTTCTCACTGGCATAATTTGATTACAAGCTAAGCAGAAGTATATGTTAATATGAGGAAATGTAAATTAGTTATAAATAATTAACAAACCAAAAATGTATGTAAACATTCAAATGATTATCTGAACAAATGCAATTTTGTTGTGTTTTTCTTAACCCATGTGATGTCCTCCAAAATGTGTAGGGTAAAAATTCACAGGGCTTCCAGATCACTTTTTCACTATTAAATTTTATTTATATAATGTTGACATCTCATAGTTCATGATGTAATTTTGACTCATGCAGTCTTAATTACTGTGTGCGTGCGTGTGTATGTGTGTGTGAGAGAGAGAGACAGACAAACTGACACAGCGACACAGACATCAGGTCCTTCCATCACTGGAGAAAGTTTTTTAATTCATATTTCTAGAAAATAGAACTGACAGTTTATAGTAGTTTGAGCACAGAGAACGATTTGCAGAAAATCAATAGTTATTTTACTCTCCTCTCTCATCGATTCAGTTATTCAGGTATTTGTTGGTCACCTCCTGCTTGCCCAGGCATTATGCAAAGTGCTATGTGGGATACAGTGGTGAACACAACAGACTTGGTTCCTGCTTTTATGTAGTTTACAGTCTAATTTCAACAGACAGAAAACCAGCAGTGAGTAAACCAAGGTGAGGCCTTGAGCTCTTTGTTTTTATACCAGTGAGGAATAATTATGAAAACAAGAAGTCTTGAGCAAATATTAAGGTCATTGTTTTTGTGAGATTATTATGAGGAAAAAAAAATACTAATGTTTTTAAATTTAAATTGCTTGTCATATTGAGGAGGCTAGCACCTTAATAATCACTGTATAACTAGTTTTATATTCATTTTTCAAAAGCAGTTATTTAAGCTGTTCGGTAGTAGCCCTTTTAATGTTCAGCAATCTGAATGGTCTTGGAGTTATTTTCAGGAATTAATATTAAATTTTTTAAAGATAGTTCCAAAAACCCTATTTATTTTCTAATTCACAGTATCTAATGCATGACAATATGAATGTTCCCCCTTACCGATTAAGTGGCCACTTTTCTTTAGGATTGTAGCAAATATAGATTGAGCTTTGTTAGATTGCAATGATGTATGCTAATTTAGTAATTTAAGACTGGTACCTTTCTATAGTATGAATGTCTTAATTTTGAGTAATAACATGAAATTTATGTGAATGACTATTGAACATTCAAAGTTGTATTTACTTAGGAAGGGGATATTTGAATGACAGCCTTATTAAGAACCCTGCTACAGTTCTGAAGGGGAAATATAAAAATCTGTGATTAAATGTAAAAAATAGCAGATTATTAGCTATAATTATAAAATATATTGGCTTTTCTTTAATTTTTGATATGAAAAGACTGGATATTTCCTGCATAATTTTGTTATATAGAACAGCTTTTAGCAGACTTTACTAAAGTTATACAAGCACATAGTTCTCCATTTAATACTATATGCCCAAAATAGGGGAGTAACTGCTTGGGTCTGTTTGGCATCAGGGCTTGTGAGGCCAGAAGAGCAACTCTAATCCTTTGGGGGTAGGGAGAAGAAGTTTCTAGGGCTCTGGGGGGAATTGCAAGTGCCTGGGGACTGGAGGAGCCTCAGCCTCGGGATGGAAAATTTGGAAATCTTAGCTCAAGAAGTACCATGTACCAGCCTCTTCAGAAAGTGGCCCACACCACCCTGAAGCAACAAAATTGTAGGCTAACTAAAGTTGGGTGGACCTGGGTTGAAATCCTAATTCTGCTTTTAATAATTATAGGTATGACTTGGATCAAGCAACTTACCTCTCAGCCACGGTGTTCTTCATCTCTGAAATATGAGTAATACTTTATTTCAGGAGACTGTTTCTAGGATTAACTGAGAAATTAAAGGAACAGAGGCACTTTAACTAAGGTCAGAATAGCCCCTGCAGAGTAGCAGTGTCTCAGTTGCTGAACTCTAGGAAGAGGGAATGAGGTGGTAAGAGAAACACCAGGGGACAGACTAAAGGAATGCTCTAGACTTTGGGGATGGGTGGGTATATTTGTGTTTTCCAATTTATTTTCACATTGCTTTACTGTGTTATTTCTATAAATGTTAATGTTTTAAACCTCTTTTATAAAATTCAGTGACAACTAGTAGAATTCTCTTGTTTGCAGAAATTAACTTATCTCAAAAGTGCAGAAAATATTGTTCATCATTACATGATTATCAAATGACTGTGAAGAATATAAAATTAAACTGAGTGACTTAATTAGTCACTGCCTTGCTAACTGTGCTGTAATTTTTTTAAATGTCTTGTTTTTAACATAGACTATCTCAACACTGGCTGGATTAGGTTAAATAAAGAATTTTTATGTTCTCT EMBV3_11795 AAGGCTTCTCCCCTGGTGGGCAATGTGGTGGTGTGAGTGCTGTGGTGTTTTCCATTCCTT Gene BVV0102_287285 - 1 EMBV3_18754 GK000013.2:38722811-38757389 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31746 TTCTCATTTCCCTTCTTTGTCCACAGTGAGGAAGTGGAGCAGTCAGTTGAAGCTACCCAA Gene BVT0102_377649 + 0 NULL GK000030.2:57756167-57779727 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247077 1 XLOC_151216 Coding TCONS_00247077 XLOC_151216 Coding Coding TMEM31 X:57772086-57781845 x TSS185113 2166 1 TCONS_00247077_1 157 3 0.778335724533716 0.000243194690857042 0.000213402589573944 0.000400251087375313 0.000142386284403839 0.000518742735179799 1.32116529562701e-05 0.000140420430154363 0.00034868583844129 2.05652982197817e-05 0.000224150643092308 1.05687357633954e-06 3.13687367129558e-23 2.38444415846786e-05 0 5.16271210877056e-05 0 0 0 2.80764645613662e-05 0.00036483791923556 0.000196214713854423 3.76858039846601e-05 0 2.14947697668427e-05 0.000335936000240715 0.000331654489099792 0.000208271315161476 0 2.24127472088279e-06 0 XM_005227847.1 GLRA4 PREDICTED: Bos taurus glycine receptor, alpha 4 (GLRA4), transcript 0.0 803 100.00 0.204986149584488 NM_010297.2 Glra4 Mus musculus glycine receptor, alpha 4 subunit (Glra4), mRNA. 2e-158 563 87.78 0.207294552169898 TCONS_00247077_1 sp|Q61603|GLRA4_MOUSE GLRA4_MOUSE Glycine receptor subunit alpha-4; 9e-91 276 95.24 0.929936305732484 1 coding GAGATGGGTGTGGGAGTCAGCCCTGATTAAGAGCTACTGAGGTGGAAGATTTTGTGAGACCTGCTCCTTACCTGGAGTGTGCAACATCCTCAATGTCCAACATAGCAGAGGCTGGTGAAAGAAGTTGCCTGTCATGAATCCTACTCCTGCTGGGGAACCACATAAGGTGTCCTATGTGAAGGCAATCGACATCTGGATGGCCGTGTGCCTGCTCTTTGTGTTTGCTGCCCTGCTGGAGTACGCTGCTGTCAATTTTGTCTCTCGTCAGCATAAGGAATTCATTCGACTTCGAAGAAGGCAGAGGCGCCACCGCATGGAAGAAGATATCATCCGTGAAAGTCGCTTTTATTTCCGTGGCTATGGCCTGGGCCACTGCCTGCAGGCAAGGGATGGAGGTCCAATGGAAGGTTCTGGCATTTATAGCCCCCAACCTCCAGCCCCACTTCTAAGGGAAGGAGAAACCATGCGAAAACTCTACGTGGACCAGGCCAAGAGGATTGACACCATTTCCCGTGCTGTCTTCCCTTTCACTTTCCTCATCTTCAACATCTTCTACTGGGTTGTCTATAAAGTGCTACGGTCAGAAGATATCCACCAGGCACTGTGAATAGGAGCTTAAGAGTCCAGTTGTTGGCTTCCTGCTTTCCCCTTGTGGGCTTTCCCTCTCCAGTAGATTCCATCAAGGGCTTGGACAGCTCCTTCCTGATCTCCTACTCAGAACTTCAACAGCCAATCCCAAAGCTATGTGGAGCTACAATGCATGGTGCCAGTGGTGGCTGTACTTAGAAAGATGGCTCACCTATCTTCATCCAGATTTTCTCCATACTATCCCATTTCTCATGAAAGTAAGGTTTGGCTATGTTCTTGTAGCCAGGATAACCCTGACTGGAGCTTCTCTGTTTTTAAGTTCTCTGGTAGAGGATATTCAGAACACTGCTACTAGATTCTGGCATTTGTCATCTTAACCTGTACCAATCTTTGCCCTGCCACCTCCTACCCAGAGTCTGACCTTTACTATGCCCTCTGTCCCTCCTACCACGGGTCAAACAGGAATCTTTCCCATCCCCAAATGCTGCCCTGTGTGACTTAGTCAGGTTTCCTTGACCCTGGGAGGAAGGCAAGGGGACAGATTCCCCACTACTAAGCTTGGAACAGTCATCGGCTACACTGGGGTAGGGTGTTGCTATACAACCCAACAGAGAGGTCTTCAAGTTTTCTTGGAACCTCAACACTGTTAAAATGGGGTCAGGAATCTTGGACTCTCAGAAAGACCACCTTTCCCAATCTACCCAAATTTCCTGATCTCAGAAATATTTGTTGTATTCCCTAACTAGCTAGCATCATGGCAGGGTGTGTTTGACTGCTGTGGAGTGTAAAAAGAGAAAGATGCTTAGACTTTTAGAAAGTTACTTGATGGTGCTATAAAGCTTTCAAGAAAAGTGAGCTTAAGGCGGTAGGGCCTAGGAGGCTTAGAATAAGAAACTATCCTAAGAGAGTCTTCTGTTGCCTGCACTTTTGTTTCTTCTTTTCTCTAAAGTCTCTTTATTTCCCAGGACCTCTCATTTCCAACTTGCTCCTTCACCTCCTTTCAGTGAGCAAATAATAATGCCATGCAACCATGCCCAGGATAAAGCAGCCTACCAGGCTCCTGGGAAGGAACTAGGTATATAGAGGATCCCTATCCTGAACAAACATTGACTTGGCCAAGCTCAGGATGGAGTTGTCGAAGCTAGAAAACCATAATTTGGACATTTTTCTTAATCCTTCTCATTTCCCTTCTCTGTCCACAGTGAGGAAGTGGAGCAGTCAGTTGAAGCTACCCAAAAATATCAGAACAGAAAGAGTGTAGAAGCGCTCATCTCAGGCCTGACACTGGGACACGGGGAAGCATGGGCCTGGTACTCTGAGTCCTTTGAAATGATCCAACTGGGAAGAACTGTAAAAAGGAAGATTAAAGTGCAGGGCTAAACAGCTGGAAGACAGAAGTGATCAAACAATCTCTTAAACATCTTGTCTTTTTCTCCGAATCTAGAATAATTAACTATGTAAATTCAGTCTCTCTCTCTCTCTCCCCCCTGCCCCATATCTTCCTCCCTCCCTTTCGCTTCCTCCTTTTCTCCTTTCCTTAAAAACAGGTGTTCAAAATTTTCTGAAAGTCAATAAATC TCONS_00244484 TCONS_00244485 r 3' 79 TCONS_00244489 r 5' 0 EMBV3_19276 TTCCAGTTCGCCAGCTCAGGGGCAAAGGTAGAAAGAGGGAAGGAGCTCAGATGTGCCAGA Gene BVT0102_176069 + 0 NULL GK000005.2:111424951-111444724 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14521 CGAGTCCTTTAGTTAAGGGCAAAAGCAAGAAATGTTAATATGGACTTGTGGAAACTAGCC Gene GeneID:281171|FSHB:NM_174060:2_cdna Constitutive 0 NULL GeneID:281171 15 GENE FSHB NULL follicle stimulating hormone, beta polypeptide EMBV3_27329 CCAAGGCGCTCCTGGAGGAATACAACAAGACTACAATGCTTCTCTCCAAGCAGTTTGTGC Gene GeneID:514327|DCTN3:NM_001075660:25_cdna Constitutive 2 NULL GeneID:514327 8 GENE DCTN3 MGC142778 dynactin 3 (p22) EMBV3_29989 GGAAGGCTGGGAACCAGATGACGACCCTATGCAAAAGAAACCAACAATAAGCAGAAAGAA Variant GeneID:414925|BIRC5:NM_001001855:338_cdna 292^409 1 EMBV3_30168 GeneID:414925 19 GENE BIRC5 MGC133855 baculoviral IAP repeat-containing 5 EMBV3_22188 CGGACATGTATCCAGTTTGCCATGAAACTCTTGTACTTTGTGCTGAGTGCCCTTGGCCTG Gene GeneID:613989|SSPN:XM_002687732:55_cdna Constitutive 0 NULL GeneID:613989 5 GENE SSPN NULL sarcospan (Kras oncogene-associated gene) EMBV3_42076 GATTTGTTCCGCTCTTTGAGGACGCGAGCTTGTGGATGTGGAAATGGTGTTTCTGTCTCC Gene BVT0102_064404 + 0 NULL GK000002.2:135060997-135418585 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106993 TCONS_00106992 TCONS_00106994 TCONS_00106995 1 XLOC_062959 NonCoding TCONS_00106995 XLOC_062959 NonCoding NonCoding - 2:135183519-135189437 - TSS78641 1552 2 TCONS_00106995_1 58 0.109536082474227 2 0.738042927159033 1.88291143993644e-10 8.08826195093257e-84 2.11603452788956e-100 5.45669378215407e-06 9.20798470576288e-05 1.43569830464401e-21 0.000285561531642183 9.21759808504251e-20 3.23155594287872e-27 0 0 0 0 0 0 0 0 0 8.77883191879418e-05 0.000548366461458687 0.00121125234421136 0 0 0 4.1818490704471e-132 0 1.97895363375394e-07 0 0 0 0 noncoding 1 0 1 1 -1.03367233845145 0.127707029899053 0.0281689247510863 0.555014866732091 CTGCGTGCCTCCCACAAATGGGCTCGTGTAACCTTTGGCAGAGCCAATAAAGCAGCCCTCATGCTCACTCCTCCCAGACGACAGGCCCAGATTGGCACAGCAACTTTCCCAAGCCCACGGAGCCCCTTGCGGGCAGAGCACTGATCTGAATCTACAGCGGCAGAGACACGCGTTATTATTACCTTATGGAAACAGACAGCGGCAGCTGACTCCCATCTCCAGCCGGCGTGCTGTCTCCACGGATCCATGATGGTTTCAATCAACACCCCTGTGGGATTTGTTCCGCTCTTTGAGGACGCGAGCTTGTGGATGTGGAAATGGTGTTTCTGTCTCCATGCCAGATGGCAGCAGAGGCCCCGCCCGGGGTCCCTGGAACTTGGTGGCTGTTCTTTTGAGAAGAACAAGGCGGAGCAGTCTTGGTGATTCTGTTTTGTCTAGGAATAAAGAGACCACACTCCTGCACAACAGTGACTGAATATTGTTCAGTCTGTACTGTGATGGAAACCATACGAAGTGGGTGACAAAGACGGCCTCATTTTATTGAGGAAAGTGGCTCAGGGACCACATGTAACTTATCCAAGAGATCAGAAGGGTCGGGGGTCTCCAGGCCCCCAGAAGTGGGGAGGAGGCTCTAAGGGTATCCTGAGCTCCCTGTCACCCATTCATCTTTCATAGGATTCACTGTGAGGGCTTTAAATCATTCTCTCCTTCCTTCATTCATGAGTCCATCCATTCATCTTTCAATGCAAATGTACTAGCCCTGACTGTCTGTACTGCCCGTGTCAGATGCTTGGATCCTGGGATAATTCAGCCACAGGAGAACGGGGTGGATGCTATCCTCTTCCTCATCCAGTTACAGGGCATCTTTATCAATTATAAGAATGCTCAGAAGGAAGATAAGGCTTCAGAGAAGTCAAGGATGAACGCAAAGAGGAAAAAGAGCTAACCACAGGTTCCCTGGGGTTGATTCCAGGGTGTGATTTCACGTCATTCTCACAGATGGTGGGATCAGAGGTCTTAGGAACACAGACCTTGCACACCTGACTCTGACTCTCAGCCCCTCCCTTCCAGCCCTGTGACCCCGGCCACGTGACTGACTCTCATGACCTTATCAGTGAATTGGGGATGCTACTAACTGTTGCTTTTAGCTTATCACGAGAAACAAAGACAGCATACTTGTGCCTGGTCTTTATTATTAATAAAAGTACTCAATGAATATTATTATCAGTAACCATATGAGGTTATCCCATTATTATCCCATTCAACAGGTGAGGGAAATGTGCCTAGAACTATCGTAACTTGCCCTAGAAAGCAGAGTCAACAGGAGAGTTAACCAGCAGAGTCTCAACAAGAGGCGGACTTCTGGAGTCAGCTCCAAGGTCTGTTTTCTCACCCATCCTCCAAGACCCCATTCTTATAATGCTTCCACACATCTGTTTGGCTATTACTATTAGTTTTGCCGGAGCTGGGGCTGGACAAACGAAGAGGTAGTGTGGGGTCAAAGTATTAGTCGCTCAGTTAGTCGCTTTGTGACCTCATGGATCCACCAGGC TCONS_00106991 s 5' 27555 TCONS_00106991 s 5' 28947 EMBV3_43151 GGTTTATCAGACCAGAGGTATGCAGTGGGCCAGGGGGCTGCAGATGATGGAGAACTTAAA Gene GeneID:533834|CD274:NM_001163412:56_cdna Constitutive 0 NULL GeneID:533834 8 GENE CD274 PD-L1 CD274 molecule EMBV3_23320 CGGGAGATCATTGAGGAGGAAGAGGAAATAAACTACCTGAAGAGGATGGGACCTCGATGG Gene GeneID:534110|IYD:NM_001102165:2_cdna Constitutive 0 NULL GeneID:534110 9 GENE IYD MGC179391 iodotyrosine deiodinase EMBV3_39764 ATGCTGTGATGTGTGCCCAGAGAGGAACTGATCACCTATGCAACCTGGGTCTCACCGCAT Variant GeneID:536495|ATP10D:NM_001105628:26_cdna 176^217 2 EMBV3_17756 GeneID:536495 6 GENE ATP10D MGC160068 ATPase, class V, type 10D EMBV3_23559 GGATTGGTGGAAGTAGCATCCATTACTGTGAACGCATCTGATTCTGAACCATCACCCCCC Gene GeneID:100336994|LOC100336994:XR_083901:581_cdna Constitutive 0 NULL GeneID:100336994 17 PSEUDO LOC100336994 NULL zinc finger protein 280B-like EMBV3_00683 AGCTCACAGACTTTGAAGACAGGGCTGATGAGACAGACTCGGGCCTGGCAGAGCCACTCA Gene BVV0101_034163 + 0 NULL GK000014.2:68032027-68135741 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13523 TTTCCAGTCCTTCTCTTGCGCCCAGTCACATCCTCAAGCTTTTCTAGAGACACTGGCCGA Gene GeneID:527341|MGC160046:NM_001102510:131_cdna Constitutive 0 NULL GeneID:527341 24 GENE MGC160046 NULL hypothetical LOC527341 EMBV3_00921 ATGCAATGGAGAAAAGACAAATCTCTTTATCGAGTGGTGCTGGGAAAACTGGTCAACCAC Gene BVV0102_167325 + 0 NULL GK000030.2:78639362-78972758 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34915 CTTTTGATCCCTCACCTTCACTCCTCCCAGACCTTGTTCTGCTAAGGCTGTTGTCCCTGA Gene GeneID:618155|LOC618155:XM_002686478:542_cdna Constitutive 0 NULL GeneID:618155 3 GENE LOC618155 NULL similar to Chromosome 1 open reading frame 216 EMBV3_23214 CCTTGACTTTTGGATTTGGCACGTTGACCTGCTGGATTCAGGCGGCATTGACACTCAAAG Gene GeneID:534560|TMEM150C:NM_001078001:19_cdna UTR3_Alt 2 NULL GeneID:534560 6 GENE TMEM150C MGC152232 transmembrane protein 150C EMBV3_15578 GGCCAGTGGGAAGCCCAGCCTGCTCTGGAGTCCAAGTAGAGAGTGCGGCCTGATGGCCCG Variant GeneID:510203|PRKCDBP:NM_001083401:25_cdna 719^797 1 EMBV3_18013 GeneID:510203 15 GENE PRKCDBP MGC142825 protein kinase C, delta binding protein EMBV3_33479 TTTAGCACATATTCATTGACAGACTTTGATTCAGGGTGTGAGACTTCTGAGGTTCCTTTG Gene BVT0102_070367 + 0 NULL GK000006.2:60265818-60277933 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205226 TCONS_00205227 TCONS_00205223 TCONS_00205228 TCONS_00205225 TCONS_00205224 TCONS_00205222 1 XLOC_124613 Coding TCONS_00205227 XLOC_124613 Coding Coding C6H4orf34 6:60275434-60336671 = TSS153308 3787 1 TCONS_00205227_1 99 0.0282545550567732 5 0.938238944411784 0.00560950941026783 0.00527303262139916 0.00530595342925679 0.00241002828387724 0.00391458141591657 0.00122768556619545 0.00310179940268854 0.00194033509948574 0.00271125858012629 2.420245064495e-05 3.80479984159268e-13 1.56843869937108e-13 6.11673139068674e-05 3.14328085151813e-08 7.61778978678262e-15 0.00347940630529378 8.48894476197036e-06 0.000904524774493183 0.00585810682915114 0.00543505326375181 0.000654818572075995 0.000623574528142119 0.000634691039897174 0.00594749026294108 0.00543507103879024 0.00276384334129309 0.00218180914855787 1.03360612264062e-06 0.000111313593531179 0.00014777176511299 XM_005207893.1 SMIM14 PREDICTED: Bos taurus small integral membrane protein 14 (SMIM14), 0.0 6352 100.00 0.929759704251386 NM_174921.1 SMIM14 Homo sapiens small integral membrane protein 14 (SMIM14), mRNA. 0.0 1678 87.67 0.357803010298389 TCONS_00205227_1 sp|Q2KIK3|SIM14_BOVIN SIM14_BOVIN Small integral membrane protein 14; 4e-69 206 100.00 0.98989898989899 1 noncoding 1 0 0 0 -0.405500454548911 0.18809070604127 -0.83043488720469 0.00106585814082691 GGCAGGCCGGCTGCCTGGGTCTTGAGCCGCTGCAATCTGTTGCGCCTCCGCCCGCGGGAGCCGGCAGATCCGGGTCTCGTGGCTTAGAGTGACGTGGTCAGTCGAATCAAAACAGAGGAGGGGAGGAAGCCGGCGGCCAGGAGCGGCGGCGGCAGCGGCTTCCCGAGCAGCCGCAGCGTTCCGGAAGCTCCAGGCGGTCTTTCTGCCGAGGCTTAGTCCGGGCCCCCAACCTCCCCGCCCCGTCGGTTGTTGTCTGGGCGGATTTAAACAGTCAAGTTAAATCAAGCTGGGTAATCATGGCAGAAGGTGGATTCGATCCCTGTGAATGTGTTTGCTCTCATGAACATGCGATGAGAAGGCTGATCAATCTGTTGAGGCAGTCCCAGTCCTACTGCACAGACACAGAATGTCTTCAGGAATTGCCAGGACCCTCTAGCGATAATGGCATCAGTATTACCATGATCTTGATGGCCTGGATGGTTATTGCAGTGATCTTGTTTCTGTTGAGACCTCCTAATCTAAGAGGATCCAACCTAACTGGAAAACCAGCCAGTCCTCATAATGGACAAGATCCACCAGCCCCTCCTGTGGACTAACTTTGTGGATATGGGAAGTGAAAATAGTTTAACACCTTGCACGACCAAATGAACGAAGATGACCAGAGTACTCTTAACCCCATTAGAACTGTTTTTTCTTTTGCATCTGCAGTATGGGATGGTATTGTTTTCATGAGCTTCTAGAAATTTCACTTGCGAGCTTATTTTTGCTTCCTGTGTCATCACCTTTCCTATATTTGAGTAAATGATTACATTAAAAAGTTACATGGGGCTTTTTTGGTTATCCTGAACTTAAACATTCCATTCGTTCTGTTTGTAACTGTGATCATAATTTTTGTGGTAATTTCCGGCCTGATAGAAGGAAATTTGAGATCTCTACATTTAAATATTTTAAGTAGTTTCAATGGGTTTAAAAATTGTTTTTTTAATAAGGTATTTATAAAGGTATTTGGGGTTACCTGAGATTGTATGAAAGAAGATTAGAACCACACTGTATTTATATTTACCTTGGTAGTTTATTTGTGGATGGCAGTTTTCTCTAGTTCTTAGGACTGTGACAACTTTTGGAATATTTTACAAATTACAGCTGAAATCTGTATCATCCACTACAGATGATTTATGTGGCTAAGAAGAGGAGAAAAGAAATGAAATAACTGTTTACTAAGTTTTTATTCCCATAAAATGTCTAATATTAAGAAAACTTTAAATAAACATGATTTAAATATGGTGGATGATTTACAGTCCATTATATGAAATTTGTAAGCCTCTGCACACTAGCCTTATTACACAGTTCATGAAAGGAGGAAAAAATTTAATTCTTTCTACCTTTGCCAGGTATAATCTATACAGTAATAATTTAAGCTATAACTTATTTTTAAAGTGGGTGCCTCTCAGGAAGCTGCTTTTGTGTTGTAAACTTCCCTGTTAAATGAAACGATCTTAAAGCTGTCTTGGGGGCCTGTTTGATTACTGACATTTGAATGCTATTTACTTACTCTCTTTTTTTTTTTGGAAGAAAAATTTTAGAGTCTTGTTATCTTTCTGACTTTAAAAAATATTTAATGAATTCTTGGTTTACTCCAAGGGAAAAGGAGGAAAATGAGAAACAATCAAGGATATTTTTTCTCAATCTCTGTCTCATTCTTGTTTGGTAATAGGATGGATTGGGGTGGGGAGGAGCACTAATATAAGGAAAATTTTGAAATGAATAAAAATGTAAAAGGTTTCATTTGTTCTTGTTCAGTTTGAAAGAAAATGAATACAAATGGCATAAAAAGTCTGCATGACCTGTGTGGTTATAGAATTTTTTTCTAACAAATGATTGCAGATGATTTATGGGGGCTAGAAGATATTTTGCTGTCAATGTAAGGATGCTCCACCTCCCAGATCAGTTTAGCTTTTCACTGTATAGATCTGAGAAATTACTTGTATGAATTGAATAAACTTCTCCATATTATTGTACTGTTTAATAGAGTTTCTGATACAATTACGTGACACTTGTAGGGTATTTTTCTCCTTTATTATGATTCTGTTCTAGGCTATAAACACTGTAAGGGCTTCATTTCATTATATAACCTGATATCGAATGCTTGCATTCCTCCTGTGCATCTTGGCTTTGTGCTCAACTTTTCTTGAAATAAAATAACCTACTGTTAATTACTTGTGTTAATCGAGGGGTGTCATAACACAGGTAAGTCAAATCCTGGGTAAAAGAACACCATAGATTTAAGGTTTTTCCTCTCAATATGGCCTATTAAAAGCCTTCTCAGCTTCATAGCTTTTAAAGCAGAAAGGGCAGGAATGGCCTAAGATGGAGCTGAATCCCTGTAATCATTTCTTTTTCTGCCCTCACCCCTGAACTTTGAAGGCTAGTACATATCTTGTAACGGTCTGCTGTTTAAGCTGCTAGAAAGCTAGTCTCTGGAAGAGATAGTGATGTGTCACTGAATCTGTGGTTCACAAAGAACTAAGAATTGACTTCGGGGAATTCCCTGTGGTCCAGTGATTAGGACTCAATGCTTTCACTGCCTAGGGCCCAGGTTCAATCCCTGATCAGGGAACTAAGACCCTGTAAGCCACAAAGAAGAATTGACTTTGGTTGAAGGAAGTGGCTGTGACCTAGAAACAATATCTAGTATTAGCTAGAGACCTGGAAATCTGGGTTCTTATTCCTAGTTCTTCATTTCTGTCACATATACTTAATTGACATTACATTAGAATATTAACCTTTTCCTATATGGACCATCTATTTAATAACAAAAGTTCTTAGTGAAGTATTTAGTCTTGGTTTTTCTGCTTGTACAATTTCTCTGCCCTCCCAACAAAGATAGTATGGGGTAGCACATAAAGTATTCCTTTTAACCTAATTAGTAATTTATATTATTCTGTATTGAGCACACCCTTACTCATTATTTGGCTTGTAAACATTCACCTAAATTATGGCTACAATAATTTTTAAATAGTCTGGAAAAAAGCTTCACATTTTAATCACTTTTGGCTCTTAAACAGCCCACAAATGCCATTAATAGTTTATTTTGTTTTAGAGTTATTTAATGTTATTTTATGCAAAATAATGTTTTGTTTTGTTTTGCTTTCCACATGGAAAAAACATTAGAACTGTGTATAGTAAAAGATTTTATGATGTATCTATCCAAACACTATCCCATGTTCAACAAGTCATATTTTACTTAAACTACTTGGAGAGAGTTTCTAAAGTAACTATTAACTACAGCCATTCAGTGGTTACTTTTAGTGTCTTTGTGATATGCGATGTTACAGTGTTTATAAATTATCTGTATCTTATATTTTCAAAGGAACCTCAGAAGTCTCACACCCTGAATCAAAGTCTGTCAATGAATATGTGCTAAAATTTGACCAGCTCAGCTTAAGACACAAAACAGCAACTTGAAGGAGAAATCGAGAGTTTAAATTAATGGGTGAAATTTTTGTTGTTGCAATAGTAGGTTTAGTCTTAACTTTATAACATTTCTAAATGAAAAGTCATATGTATTTGTTACTGTGTCTGATGATTACTTTGTTAAAAGCAAAAGTGGTCATGTGATGTACCAAATGTTAACTGCTGTTTTTAAATGTTTAAATCATGCCAAACAAATCATGTCTGTGCCATCCAGGGTTTATTGTAATCTTTTACTGAGTACTTGGATTGGGAAAAAGGGCTTGTACTATGCACTTTTTATTAATGAATAAATAGGAAACATTAGTAACACTCA EMBV3_04111 CCTTTGCTTATGACCAACATGGTGTGTGGAAAATGTGTGGCCTCTGCTTGGATTGCAGGC Gene GeneID:513494|LOC513494:XM_002685933:83_cdna Constitutive 0 NULL GeneID:513494 3 GENE LOC513494 NULL similar to Olfactory receptor 10X1 (Olfactory receptor OR1-14) EMBV3_00514 CCTCCAAAGTACCGGAAGATCCCACAGGAAGGTTTTTCGACACTGACCGCTGATGTCACA Gene GeneID:529298|L3MBTL:XM_002692323:92_cdna Constitutive 0 NULL GeneID:529298 13 GENE L3MBTL NULL l(3)mbt-like (Drosophila) EMBV3_33305 ATGCGCAGTGTGCTTCAGGCCATCAACTTGCAGGTCCAGATCTACAACACCTGCCAGTGA Gene GeneID:520167|LAMB2:XM_002697041:495_cdna Constitutive 0 NULL GeneID:520167 22 GENE LAMB2 MGC128643 laminin, beta 2 (laminin S) EMBV3_18773 CTTGTAATCGTCATGGTAGACAGATTATTTCTGGAGCATTCTGACAGTGTATCTTTGAAG Gene BVT0102_289222 + 1 EMBV3_18120 GK000005.2:17546892-17858048 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23425 AAATTAATCTTCACAGGTACTTTTACACTGTAACTACTGCTGGAAAGCTGGTGATAGAGG Gene BVV0101_012559 - 1 EMBV3_22803 GK000003.2:51325806-51326158 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169856 TCONS_00169861 TCONS_00169853 TCONS_00169860 TCONS_00169862 TCONS_00169858 TCONS_00169857 TCONS_00169855 TCONS_00169854 1 XLOC_103454 Coding TCONS_00169862 XLOC_103454 Coding Coding GLMN 3:51303437-51326155 j TSS127070 1603 1 TCONS_00169862_3 220 0.0455396132252027 11 0.929920323986442 1.39942868845454e-51 0.000367385470718601 8.87216378265931e-11 0.000302313785056875 6.66462436681131e-24 3.79977135730049e-25 0.00112251831984908 9.18031832491174e-22 0.000688135445466266 0.000430054260075099 0.000384557449718746 0.000299510396807257 7.10324914058998e-05 0.000129373163966938 0.00124496696999701 0.00176079103397787 2.78460051746229e-158 0.00226813880834424 0.000121963216687656 2.26343666182274e-15 8.1710789599495e-300 0.00232985096790814 0.00213886698967768 0.000286909133648668 0.00102887601053636 0.000385495413689582 1.16172281520498e-12 0.00043348360312272 0.000185689953855814 0.000137733352832515 XM_005204258.1 GLMN PREDICTED: Bos taurus glomulin, FKBP associated protein (GLMN), 0.0 2729 100.00 0.943231441048035 NM_053274.2 GLMN Homo sapiens glomulin, FKBP associated protein (GLMN), mRNA. 0.0 1276 90.02 0.586400499064255 TCONS_00169862_3 sp|Q92990|GLMN_HUMAN GLMN_HUMAN Glomulin; 5e-137 401 90.50 0.995454545454545 1 noncoding 0 1 1 1 0.115873297800714 0.560005273915733 -0.00285689532284228 0.960216209463328 TGAAGGAAGATTTGTTACATGGCAAATGTCCAAAGCCTCGGCCTACAAGGCAGGAATTTCCAAGGGTCTCCTGGCACAAAACAGAGGAGTCTGTTTTCTCCAAAGGATTGGATCTGTTGGAGAATGGTTTATTGAGAATAGAGGACAACAGTCTACTTCACCAGTACTTAGAAATCAAGAGTTTTCTTACTGTACCTCAGGGCTTAGTCAAAGTAATGACCCTCTGCCCCATTGAGACATTGAGGAAAAAAGGTTTAGCTGTGCTTCAGCTGTATATTAACAAATTGGATCCACAAGGCAAATATACATTATTTAGGTGCTTACTGAGTACAAGTAATCACTCAGGTGTGGAGGCCTTTATTATTCAAAATATCAAAAATCAAATTGACATTTCGTTAAAGAAAACACAGAACAAATGGTTTACAGGACCACAGCTGATTTCCCTTCTGGATTTGGTACTCGTTCTCCCAGAGGGTGCTGAAACAGATCTACTGCAAAACTCAGATAGGATAATGGCTTCATTGAATTTATTGAGGTATTTGGTTATCAAAGATAATGAAAAAGACAATCAAACTGGTTTGTGGACAGAACTTGAAAAGATTGAGAATAATTTCTTAAAGCCCCTCCATACAGGACTCAATATGTCAAAAGCACATTATGAAGCAGAAATTAAGAATAGCCAAGAAGTCCAGAAGTCTAAAGATCATTGTTCACTAAATGTAGGTAGAGAAGAGATCCCAAATATGCCTCCTGAAATGCAACTTAAGGTCCTACATTCAGCTCTTTTCACATTTGATTTGATTGAAAGTGTTTTGGCTCGAGTAGAAGAACTCATTGAAACAAAAACAAAGTCTACCTCTGAGGAAAATATGGGATAAAGTGAAAGCTCCATCTCCTAAATAAAAACTAGTAATACACTATATTTTTCATTATGGTTTATTTAATACCTTTATAGAAGTTTTTCTGTAAAACACACTGAAAATAAATGTAGCTTCTCTTACTTATCTGTTTCAGCAGTGACACATTATGGATCAGTAGCACTGTTTCCTTTTAAAAAGGTATCTATATGGTAAATAATGCCCACGTGTATTTTAAATACTACTGTTGAAAAATCTAATACGAATCAATAATTTTATGATTTCATAAAATGTACTGGAATTACCTTTATCCATACAGTTGTGAGTTTATAAAAATTCTGATACACTTTATGTTCCAGTTAGATGCTATTTTAGAACTCCTAGTGTTAAACTGGCTATCATAGCACTGTAGGAGCTTAGAGAAAAATTCTGAGTCTGTGTACTACTCCTAATTTCCCTTTTTTTCCCTGCCTCAGGAGTCTTAGAGGGCAGAGTCCTCTATCACCAGCTTTCCAGCAGTAGTTACAGTGTAAAAGTACCTGTGAAGATTAATTTTAGAAATAGTGGCTTGTATTATAAAAAGGTATATATGACTTTTTCTTTAACCCAAGGGGCTGCTTATTTGCAATTAAACATTTCTTCTTCCAACTTAATTTGTATCATTAAGAAGCTTCAATCTAAGTTTTATATACATGTACCAATATTTTTTGAACATTATTAAAGGAATTAACAGAACTCTGAAAGTA EMBV3_31968 GGCTCCCGTAACAAAATACCGTGACTCGGGGCTTTCGATGACTAGCTTGACTCCTGATGA Gene BVV0102_220458 + 0 NULL GK000004.2:8337904-8490675 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04119 GTGTTAATTAGGAGACCATAGAACGTGACACCTTGGGGTCTTTACGTAGTTGCTTTGTGG Gene GeneID:783831|SELT:NM_001103103:74_cdna UTR3_Alt 2 NULL GeneID:783831 1 GENE SELT MGC151598 selenoprotein T EMBV3_24423 CAACTGGACCTGGTTTTGTTCCTCCGCCTCGTCCTCCAGTCAGAGTTCCATTGTTTCCAA Gene GeneID:513132|CTAGE5:NM_001075599:20_cdna Constitutive 1 NULL GeneID:513132 21 GENE CTAGE5 MGC139789 CTAGE family, member 5 EMBV3_37086 CTCCGGTTCCCGCCTGGGCTTGTTTTGTCTTGAGATCTTGTTTTACTCCCTAGTAGATCA Gene BVT0101_062196 - 1 EMBV3_11442 GK000028.2:7466320-7879942 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19377 AGAGGCAGTAGGCATTCCTTGGTACCTGGTCCCTTCCTCCCATCTTCAAAGCCAGAAATT Gene BVV0102_112498 - 1 EMBV3_19723 GK000030.2:166032-323756 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20208 GCAGCCATGTCTAAGAGGAAGTCTGTAGGACTGGTCACTGGATCACTCATTGGTGGAATG Gene GeneID:100299636|LOC100299636:XM_002693746:502_cdna Constitutive 0 NULL GeneID:100299636 15 GENE LOC100299636 NULL similar to olfactory receptor 154 EMBV3_34626 AGAATCTGAAAGAGCTATTTAGCCAGTTTGGCTGTGGAAGAGATGAATGGAAAAGAAATC Variant GeneID:534576|PABPC4:NM_001083724:227_cdna 788^882 1 EMBV3_36204 GeneID:534576 3 GENE PABPC4 MGC139030 poly(A) binding protein, cytoplasmic 4 (inducible form) EMBV3_19851 CTGTTTGAAGACACGAACCTGTGCGCCATCCACGCCAAGCGCGTGACCATCATGCCCAAA Gene GeneID:504599|LOC504599:NM_001166569:43_cdna Constitutive 0 NULL GeneID:504599 3 GENE LOC504599 NULL histone H3.2 EMBV3_14605 GACTCAGAGGCTAGATAAAGTAACTATACTGGTCCCCTTGCTTCATGTAAATGCAAACTG Gene BVV0102_362703 + 1 EMBV3_39882 GK000004.2:40345592-40432981 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09383 TTCCCCGACACCTATCGGCTGTTCGGCAACATCCTAGACAAGCACCGGCAGGTGGGTAAT Gene GeneID:281119|DNMT1:NM_182651:273_cdna Constitutive 1 NULL GeneID:281119 7 GENE DNMT1 DNMT DNA (cytosine-5-)-methyltransferase 1 EMBV3_14250 CCAGGAACAAAGGTGAAAGTGAAGAAGGAATTGGCCATTACAAGTTCCTGGACATACAAG Gene GeneID:521854|NID2:NM_001102065:70_cdna Constitutive 0 NULL GeneID:521854 10 GENE NID2 MGC159943 nidogen 2 (osteonidogen) EMBV3_22763 GCACGCATATCAGGCAGCACTCGGGGGAGAAGCCCTTCAAATGCAAGTACTGTGGTAAAT Gene GeneID:100140032|PRDM14:XM_002692723:171_cdna Constitutive 1 NULL GeneID:100140032 14 GENE PRDM14 NULL PR domain containing 14 EMBV3_10109 GAGATCATGGTTCATGGAGATTGGGAGCCTAGAGCCTATGTCAACAGCCCCTCAGTGAAA Gene BVV0102_047185 - 0 NULL GK000021.2:2988429-4001551 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122308 1 XLOC_073863 NonCoding TCONS_00122308 XLOC_073863 NonCoding NonCoding - 21:3698919-3699236 - TSS91067 317 1 TCONS_00122308_2 96 1 0 0 0 0 0 0 0 9.19828530319922e-06 0 4.97800220176732e-05 0.000737666863840265 0.00076787432996845 2.2559513112623e-05 0 0.00139734605043086 0 0.00304108455885465 0.000122203952755299 0.00333753898477036 0 0.000124772563971274 0 0.00211461827176766 0.00233210634180449 0.00109296254888909 1.09282071219903e-05 0.000100014541446694 1.84831388712812e-05 0.000287852640165156 0.000315217439338381 0.000689100921093464 XR_232221.1 LOC101909328 PREDICTED: Bos taurus uncharacterized LOC101909328 (LOC101909328), 6e-162 572 100.00 0.996845425867508 0 noncoding 0 0 0 0 -0.0549394484810239 0.602401306167077 0.0498133097057711 0.296527889922717 AGTCAGGTCTCTGCGTTGGTCAGAGATCATGGTTCATGGAGATTGGGAGCCTAGAGCCTATGTCAACAGCCCCTCAGTGAAATTTTGCATGGATCTTGTGGAAGATGCCAAGTGTCATCCCATTTCGTGGGATGGTGGGAGGTCAGGACTCCATGGAGGTGGCACGCATGTTCATACTGCAGGGCCTTTGCATGCGGTCTCTGAGACTTGGATACCCAGACAGATTTCCAGACACACACCCAAAATGCTGAGAATGCATTTTTATTGGTACACCAGAATGCAGGCACTCAAACTCACATCGAATCCCCTGCTACCCT TCONS_00118546 . 3' 70111 TCONS_00118546 . 3' 70427 EMBV3_05332 GCTGGAATCTGTCTTCTTATCATCATTCAGGGATTCCGTGTGGACCTGCCCATCAAGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26210 CTGCTCAACTTATACATAAAGAGGGCGCAGACCACGAACAGCAACAGCAGCTCCTCCTCT Gene GeneID:523441|CLASP1:XM_002685444:63_cdna Constitutive 0 NULL GeneID:523441 2 GENE CLASP1 NULL cytoplasmic linker associated protein 1 EMBV3_17152 TAGAAGGATGAAAAACAGTGTGGATCGTCAAGTGGGAACTGCCCTCCAGGCCGTCTTTTG Gene GeneID:613927|PDIA6:XM_002691528:558_cdna UTR3_Alt 2 NULL GeneID:613927 11 GENE PDIA6 NULL protein disulfide isomerase family A, member 6 EMBV3_23104 TCCCCTTTGTGTCAGGGCGGAAGCCAGACACTGAAGAGACCAGCAAACAGAAGAAGTTAT Gene BVT0102_060279 + 0 NULL GK000017.2:50749074-50796136 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177648 TCONS_00249639 TCONS_00115686 TCONS_00252353 TCONS_00224113 TCONS_00249539 TCONS_00229957 TCONS_00238894 TCONS_00116100 TCONS_00066271 TCONS_00012056 TCONS_00124846 TCONS_00071860 TCONS_00136620 TCONS_00023360 TCONS_00129573 TCONS_00242885 TCONS_00023373 TCONS_00253719 TCONS_00209846 TCONS_00065476 TCONS_00177296 TCONS_00023614 TCONS_00218945 TCONS_00252107 TCONS_00250930 TCONS_00157671 TCONS_00166977 TCONS_00008224 TCONS_00250198 TCONS_00021569 TCONS_00208745 TCONS_00161097 TCONS_00248864 TCONS_00039854 TCONS_00165934 TCONS_00031939 TCONS_00249990 TCONS_00238307 TCONS_00131137 TCONS_00142123 TCONS_00038458 TCONS_00185881 TCONS_00070920 TCONS_00178417 TCONS_00062744 TCONS_00007431 TCONS_00019961 TCONS_00210176 TCONS_00245928 TCONS_00186813 TCONS_00124585 TCONS_00000305 TCONS_00037818 TCONS_00130084 TCONS_00064462 TCONS_00178325 TCONS_00233372 TCONS_00161667 TCONS_00156733 TCONS_00167260 TCONS_00153218 TCONS_00123168 TCONS_00065823 TCONS_00156998 TCONS_00130290 TCONS_00063080 TCONS_00199802 TCONS_00207365 TCONS_00197601 TCONS_00109026 TCONS_00040179 TCONS_00038932 TCONS_00088088 TCONS_00021595 TCONS_00136897 TCONS_00199424 TCONS_00218857 TCONS_00056820 TCONS_00059708 TCONS_00208264 TCONS_00177281 TCONS_00170823 TCONS_00250579 TCONS_00078580 TCONS_00178695 TCONS_00122313 TCONS_00053500 TCONS_00020023 TCONS_00222114 TCONS_00131550 TCONS_00109858 TCONS_00019199 TCONS_00007359 TCONS_00152645 96 XLOC_131641 XLOC_107421 XLOC_152582 XLOC_069855 XLOC_155294 XLOC_137409 XLOC_152482 XLOC_139451 XLOC_145560 XLOC_070269 XLOC_040985 XLOC_007606 XLOC_076389 XLOC_043630 XLOC_082831 XLOC_014027 XLOC_078286 XLOC_149548 XLOC_014040 XLOC_156658 XLOC_128357 XLOC_040195 XLOC_107070 XLOC_014281 XLOC_132264 XLOC_155048 XLOC_153873 XLOC_096126 XLOC_101813 XLOC_003782 XLOC_153141 XLOC_012242 XLOC_127257 XLOC_097989 XLOC_151807 XLOC_023671 XLOC_100774 XLOC_018184 XLOC_152933 XLOC_144974 XLOC_079842 XLOC_086548 XLOC_022282 XLOC_111934 XLOC_042697 XLOC_108190 XLOC_037471 XLOC_002992 XLOC_010639 XLOC_128686 XLOC_150855 XLOC_112864 XLOC_076129 XLOC_000084 XLOC_021647 XLOC_078795 XLOC_039186 XLOC_108098 XLOC_142854 XLOC_098554 XLOC_095193 XLOC_102096 XLOC_092983 XLOC_074722 XLOC_040542 XLOC_095458 XLOC_079001 XLOC_037807 XLOC_121454 XLOC_125882 XLOC_119262 XLOC_064931 XLOC_023996 XLOC_022752 XLOC_052875 XLOC_012268 XLOC_083108 XLOC_121077 XLOC_132176 XLOC_034623 XLOC_036490 XLOC_126777 XLOC_107055 XLOC_103665 XLOC_153522 XLOC_047468 XLOC_108468 XLOC_073868 XLOC_031751 XLOC_010701 XLOC_135423 XLOC_080255 XLOC_065762 XLOC_009879 XLOC_002920 XLOC_092410 Coding TCONS_00053500 XLOC_031751 NonCoding NonCoding - 14:52661045-52687830 - TSS39450 720 0.459722222222222 2 0.973192951015532 0.00197914637265004 0.00612758304366126 0.00129964924652018 0.000714437596802481 0.00324109484805268 0.000285954513931619 0.00198178699236421 0.00154324834260234 0.000383016757054433 0.00143186184823261 0.00185798371666782 4.45504415239356e-05 0.00350332391452379 0.00064824283052237 0.00299117315654448 0 0 0 0.000484704623874142 5.59193840107638e-05 0.000165085337950431 1.1451660115788e-05 1.82024837463601e-06 0 0.00178266773016844 0.00156775517941347 0.00215573930211627 0.000229863194784061 8.16959163701669e-05 3.84031753124306e-05 0 noncoding CAGCTTACACTTCTCAGTTGTTCCAGAAGAGTTGAGGTAGGAGAGTGGTGGGCTCTGTTCAGCCTGTTATCAGCTCAGAACATGCTAGAAAATTAAGAAGACTTCTTGCACTATTCATTACCTACAACTAGAGGACAGATAACACTGAAAAAACAGATTCAAAATTTAATTACATCTGTTGAACAATTGCAAAATACACGGACCACTGAGCTTCTGGGGATTTCCTGACGTGAGCATTGTGATAGTGAAAAAGCAAGGCCCTGAGGATTCAGATGACTGGGAAAAATTGACCAGAGAATTTCCACCTCCAGACTTTCCTAATATCTCTGGACTTTAAGAGCAGTGTCTTCTGTTGACTGCGAACAGTGCAAATAAGTTACCTGAGTGTCCCTCCCTCCCCACAGCGCGGCTGAACAAGTGAGCCTAAAAAAAAAAAAACAGTGTCCTCCACTGTCCCCTTTGTGTCAGGGCGGAAACCAGACACTGAAGAGACCAGCAAACAGAAGAAGCTATAACAGAGGGAACTGCCTTGGAAGCTACAGGCAATAGATTAAAACCTGGTGGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTAAGAAATATAAGTCGGACCAAGGAACTAGCCGAAAATGAACTGAACCCACAATACCCCCAGCAAAACCAGAGAAAGTCCTAGATATATTTTTACTATTTTTACGATCATTCTTTCTTTC TCONS_00051936 r 5' 288376 TCONS_00051936 r 5' 261926 EMBV3_43018 CATGGGCATCATTGTTGGTCTGGTTCTCCTTGTCACTGGAGCTGTGGTGGCTGGATTTGT Gene GeneID:407173|JSP.1:NM_001040498:54_cdna Constitutive 0 NULL GeneID:407173 23 GENE JSP.1 MGC129071 MGC179240 MHC Class I JSP.1 EMBV3_16891 TGCATCTTTCGAAGTCCACTGCCTTGGTTTTCCCTCTTGTTTTAGCTGTTCCACATACAG Gene GeneID:538730|NRN1:NM_001046438:226_cdna Constitutive 0 NULL GeneID:538730 23 GENE NRN1 MGC137702 neuritin 1 EMBV3_19475 GAGGCCATTATGAAGCCCATCAAAAGAGAGAGACACAGTATGATTGCACTTAGAGGACCG Gene BVV0102_025626 + 0 NULL GK000005.2:108235365-108308617 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201564 1 XLOC_123210 NonCoding TCONS_00201564 XLOC_123210 NonCoding NonCoding - 5:108238756-108239202 - TSS151132 446 1 TCONS_00201564_1 81 0.914798206278027 1 0 6.10120512888485e-05 4.50603322089334e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.21566635183964e-05 0 0 0 2.05696164693456e-05 0.000902131588530509 0 0 0 0 0 0 XR_227105.1 LOC100848673 PREDICTED: Bos taurus uncharacterized LOC100848673 (LOC100848673), 5e-13 78.8 76.98 0.273542600896861 NM_018363.3 RNLS Homo sapiens renalase, FAD-dependent amine oxidase (RNLS), 2e-17 93.3 68.24 0.603139013452915 0 noncoding 0 0 0 0 0.212009331116483 0.299883306765495 -0.0262627990230733 0.654767526438083 CAAAAGACGGAAGCATCTCCTGTGTCTGTGTCATTGACAGATGATGGATAGACAAAGCGTGATGTGTATACACAATGGACTATGTTTCACAGCCTTAAAAAGGAAGCAAATTCTGACAAACGCTGGACAATATGGATGAACCTTGAGGCCATTATGAAGCCCATCAAAAGAGAGAGACACAGTATGATTGCACTTAGAGGACCGGAAGTAGTCAGAATCATAAAGACAGAAGTGGTTGCCAAGGTCTGGAGGGAGGGGGAAATGGATAGTTGCTGTTCAATGAATATTGACTTTCAATTTTGCAAGAGAAGAAGAGCTGGAGTTTAACTGTACAACCATGTGAGTGTCCATAACACTTCTGAGATGTACACTTGAAAATACTATGATGGTAAATATTATGTGTATCTTATTGCGGTTTCAAATTTTTTAATTAAAATATTTTTTAA TCONS_00196339 . 5' 3131 TCONS_00196339 . 5' 3131 EMBV3_08827 CTGAAGGGCTACCTGCCCGGGGCCGGAGAGGTCCTGCAGGAGGGAGCTGAGAGCCTCGAG Variant GeneID:509863|SESN2:NM_001024507:114_cdna 381^446 1 EMBV3_08360 GeneID:509863 2 GENE SESN2 MGC140133 sestrin 2 EMBV3_18653 TTCTTGGGACTGATTCTTTCCTCCTGCCGCAAAGCATAGCAGTTGCGGGACTAAGATGTG Gene GeneID:513551|CENPN:NM_001038099:38_cdna Constitutive 0 NULL GeneID:513551 18 GENE CENPN CENP-N MGC133728 centromere protein N EMBV3_21897 GCTTCCTGCATGAAGTGCCCCTTGGACAGGAAATAGAGAATGTAGTAGAGACCCTACCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07719 ATCTGGAGAAGGAAGCTTTGGAGCATAAGGACAGGGAAGACTATGTGCCCTACACTGGAG Gene GeneID:100336569|LOC100336569:XM_002690966:348_cdna Constitutive 0 NULL GeneID:100336569 10 GENE LOC100336569 NULL tropomodulin 3 (ubiquitous)-like EMBV3_39613 TTCTCCCTACATCTCGTTTTCTGACTTTGGCTACATCTCATAGTAAGTTCAGAGTAGTTC Gene GeneID:535102|ZC3H15:NM_001046394:10_cdna Constitutive 0 NULL GeneID:535102 2 GENE ZC3H15 MGC140364 zinc finger CCCH-type containing 15 EMBV3_39181 CGGTTGTACGCGCAGTCTGCCCAGTCGGATAGGCCTTGTAGAGAAGAAAGAAATGGAAAT Variant GeneID:100141235|LOC100141235:XM_002691066:502_cdna 67^539 3 EMBV3_36027 GeneID:100141235 10 GENE LOC100141235 NULL similar to Chromosome 14 open reading frame 50 EMBV3_17163 CAGAAGCAGAGATTGACGCTCACCTTGTTGCTCTAGCAGAGAGAGACTAGACACTGTAGG Gene GeneID:507213|PSMA6:NM_001045962:11_cdna Constitutive 1 NULL GeneID:507213 21 GENE PSMA6 MGC134228 proteasome (prosome, macropain) subunit, alpha type, 6 EMBV3_10773 GGCATTTTTGTACTCTCTCTAGTCCCTGAAGTTTAACAGGGCCACAGACATCTGACAGCT Gene BVV0102_340125 - 1 EMBV3_17486 GK000019.2:36422984-36444999 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093516 TCONS_00093521 TCONS_00093515 TCONS_00093522 TCONS_00093524 1 XLOC_057167 Coding TCONS_00093522 XLOC_057167 Coding Coding SPAG9 19:36273803-36426321 j TSS70124 7950 1 TCONS_00093522_7 1292 0.00930817610062893 29 0.948064805890491 0.0011436990917962 0.000731803486298873 0.00086388662818146 0.000423405899485699 0.000778794133172985 0.000583938341886291 0.000380609365785926 0.000915126685737206 0.000990196825440501 0.000311835193299436 0.000117543002907481 2.33098481091732e-08 7.18373748190363e-05 0.000214271892581247 2.40083146356828e-05 0.00249025228339824 0.00134204335777102 0.00175529329814782 1.10939896340544e-06 0.000943514329726197 0.000194397169834605 0.000867400558525897 0.000285229690070656 0.00101848775006259 1.39494411118519e-05 1.49221127304836e-05 0.000588343682884719 0.000296333374621799 0.000234809717341191 3.59329397153697e-06 XM_005220615.1 SPAG9 PREDICTED: Bos taurus sperm associated antigen 9 (SPAG9), 0.0 1.336e+04 99.40 0.93748427672956 NM_003971.5 SPAG9 Homo sapiens sperm associated antigen 9 (SPAG9), transcript variant 0.0 6890 89.24 0.645283018867924 TCONS_00093522_7 sp|O60271|JIP4_HUMAN JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4; 0.0 2506 94.10 0.99922600619195 1 coding 0 1 1 0 -0.00616147689613677 0.972129650458576 0.0540195731039633 0.385546552658867 GCCCCAGCTCCAGCCGCAGCGGCCCCGTCCCGTGCGGGCCCGTGTCGCCCCCTCAGCCGGAGACGCCCCCGGCCGGCGGGCAGCCCGCCACCATGGAGCTGGAGGACGGTGTGGTGTATCAGGAGGAGCCCGGCGGCTCCGGGGCCGTGATGTCGGAGCGGGTGTCCGGCCTGGCCGGCTCCATCTACCGCGAGTTCGAGCGGCTCATCGGGCGCTACGACGAGGAGGTGGTCAAGGAGCTGATGCCACTGGTGGTAGCCGTGCTGGAGAACCTGGACTCGGTGTTCGCGCAGGACCAAGAGCACCAGGTGGAGCTGGAGCTGCTCCGGGACGACAACGAGCAGCTCATCACCCAGTACGAGCGAGAGAAGGCGCTGCGCAAGCACGCAGAGGAGAAATTCATTGAATTTGAAGACTCTCAAGAACAAGAAAAAAAAGATTTACAGACCAGAGTGGAATCTTTAGAATCTCAAACAAGACAACTTGAACTCAAGGCCAAAAACTATGCTGACCAGATTAGCAGACTTGAAGAAAGAGAAGCGGAACTGAAGAAAGAATATAATGCTTTGCATCAGAGACACACTGAGATGATCCATAATTATATGGAACACTTAGAAAGAACAAAACTTCATCAGATCTCAGGGAGTGATCAACTAGAATCCACAGCTCATAGTAGAATTAGAAAAGAACGTCCTATATCGTTAGGGATTTTCCCTTTACCTTCTGGAGACGGATTGCTTACGCCTGACACTCAGAAAGGTGGCGAGACCCCTGGATCAGAACAATGGAAATTTCAGGAATTAAGTCAACCACGTTCTCATACCAGTCTGAAGGATGAACTTTCCGATGTTAGCCAGGGAGGATCTAAAGCCACCACTCCAGCGTCGACAGCTGCTTCAGATGTGGCAGCAACACCTAGCGATACTCCCTTACATGAGGAGAACGGAGGGGTTGTGGAGGTTGCAGATACACCCGATAAGTCAGAGATAAGCAAGCATATCGAAGTACACGTAGTCCAGGAAACTAGAAACATAGCAACGGGTTCTGCTGAAAATGAAGAGAAGTCAGAAGTTCAGGCAATCATTGAATCCACTCCTGAGTTGGATATGGACAAAGATCTCAGTGGATATAAAGGCTCAAGCACTCCCACCAAAGGCATAGAGAACAAAGCTTTTGATCGCAATACAGAATCTCTCTTTGAAGAACTGTCTTCAGCTGGTTCAGGTCTAATTGGAGATGTGGATGAAGGAGCAGATTTACTAGGAATGGGTCGTGAAGTTGAAAATCTCATATTGGAAAATACACAACTATTGGAAACCAAAAATGCCTTGAATGTAGTGAAGAATGACTTGATAGCAAAAGTAGATGAACTTACCTGTGAGAAAGATGTGCTGCAAGGGGAGCTGGAGGCTGTGAAACAAGCCAAGCTGAAGCTGGAGGAAAAGAACAAAGAATTGGAAGAAGAGCTTAGGAAAGCTCGTGCAGAAGTTGAAGATGCAAAGCAAAAAGCAAAAGATGATGATGATAGTGATATTCCCACAGCCCAAAGGAAGCGGTTTACTAGAGTAGAAATGGCCCGAGTTCTAATGGAGAGAAACCAATATAAAGAGAGATTGATGGAGCTTCAGGAAGCTGTTCGATGGACAGAGATGATTCGTGCGTCAAGAGAAAATCCAGCCATGCAGGAGAAGAAAAGGTCAAGCATTTGGCAGTTTTTCAGCCGACTTTTCAGCTCCTCAAGTAACACTACTAAGAAGCCCGAACCACCAGTTAATCTGAAGTACAATGCACCAACCTCTCACGTTACGCCTTCCGTCAAGAAAAGAAGCAGCACCTTATCTCAACTCCCTGGGGATAAGTCCAGAGCCTTTGATTTCCTTAGCGAAGAAACTGAAGCTAGTTTAGCCTCACGGAGAGAACAAAAGAGAGAACAGTATCGTCAGGTAAAGGCCCATGTTCAGAAGGAAGATGGTAGAGTGCAGGCTTTTGGCTGGAGTCTGCCTCAGAAATACAAACAGGTAACCAACGGACAAGGGGAAAATAAGATGAAAAATTTACCTGTGCCTGTCTATCTCAGACCTCTAGATGAAAAAGATGCATCAATGAAGCTTTGGTGTGCTGTTGGAGTCAATTTGTCTGGTGGGAAGACCAGAGATGGTGGTTCTGTTGTTGGAGCAAGTGTGTTTTACAAGGATGTTGCTGGTTTGGAAGCAGAAGGCAGTAAACAGCGAAGTGCATCTCAGAATAGCTTAGACAAGTTAGACCAGGAACTTAAGGAACAACAGAAGGAGTTAAAAAATCAAGAAGAATTATCCAGTCTAGTCTGGATCTGTACCAGCACTCATTCAGCTACAAAAGTTATCATTATCGATGCTGTTCAACCAGGCAACATCCTAGACAGCTTCACTGTTTGTAACTCTCACGTTCTGTGTATATCAAGCGTACCAGGAGCCCGAGAAACAGACTACCCTGCAGGAGAAGAGCTTTCAGAATCTGGACAAGTAGACAAAGCATCTTTATGTGGAAGCATGACAAGCAATAGCTCAGCAGAGACAGACAGCCTGTTGGGAGGCATCACAGTAGTTGGTTGTTCTGCAGAAGGTGTGACAGCAGCTGCCACTTCCCCTAATACCAATGAACCTTCTCCAGTGATGGAAAAACCGCCAGCAGAAGAAGCAACTGAAGCTACAGAAGGCAATGCAGGATCAGCTGAAGATACTGTGGATGTCTCCCAAACTGGCGTGTACACAGAGCATGTGTTTACAGATCCTTTGGGAGTTCAAATCCCAGAAGACCTGTCACCAGTATATCAGTCAAGTAATGACTCAGATGCATATAAAGATCAAATATCAGTATTGCCAAATGAACAAGACCTGGTGAGAGAGGAAGCCCAGAAAATGAGTAGCCTTTTACCAACTATGTGGCTTGGAGCTCAAAATGGGTGTTTGTATGTCCATTCATCTGTAGCCCAGTGGAGGAAATGTCTCCATTCTATTAAACTTAAAGATTCGATTCTCAGTATTGTACACGTGAAAGGAATTGTGTTAGTGGCCCTAGCTGATGGGACCCTTGCCATCTTTCACAGAGGAGTTGATGGACAGTGGGATTTGTCAAACTATCACCTGTTAGATCTTGGACGACCGCACCATTCCATCCGATGCATGACTGTGGTACATGACAAAGTTTGGTGTGGCTATAGGAACAAAATTTATGTGGTTCAGCCAAAGGCCATGAAAATAGAGAAATCATTTGATGCACACCCCAGGAAGGAGAGCCAAGTGCGGCAGCTTGCCTGGGTGGGTGATGGTGTGTGGGTCTCCATTCGCTTGGATTCCACACTCCGTCTCTATCATGCACACACTTATCAGCATCTGCAGGATGTGGACATTGAGCCTTATGTAAGCAAAATGCTAGGTACTGGAAAACTGGGCTTCTCTTTTGTGAGGATCACAGCGCTTATGGTGTCTTGTAACCGTTTGTGGGTGGGAACAGGAAATGGTGTCATTATCTCCATCCCATTGACAGAAACGAATAAAACATCAGGAGCATCGGGAAATCGTCCTGGAAGTGTCATTCGAGTATATGGTGATGAAAACAGTGATAAAGTGACACCAGGGACATTTATACCCTATTGTTCAATGGCACATGCACAGCTTTGCTTCCATGGGCACAGGGATGCTGTGAAATTTTTTGTGGCTGTCCCAGGTCAAGTCATCAGCCCACAAAGTGGCAGCAGTGGTACAGATCTGACAGTTGACAAAGCAGGGCCATCTGCACAGGAGCCTGGCATCCAGACACCCTTGAAGTCTGTGCTTGTCATTAGTGGAGGAGAGGGCTACATTGACTTCCGAATGGGTGATGAAGGTGGAGAATCAGAGCTTCTTGGAGAGGATCTTCCACTTGAACCTTCTGTCGCCAAAGCAGAAAGGAGTCACTTGATAGTGTGGCAAGTGATGTATGGTAGTGAGTGAACCCATAGGACACAGATGGCAACAGGGAAGCCATCTCTTCTGCATGGTTTATTTTCCCTTTATTTAATGGTCTCTTTGTGAAATAAGTTTCACCACATAATGTGTGAGCATTTTTTTCTGTTAACTTTATACTATAAAATCTGTCCTGCTGTAACAATACAGGAGCTAGCTGTTTTACTGCACCAGTGTTATAGGCAATTTCAGTATATTATGATCAAATCAAAGAATGTTTACTTTCTGCAAACTGGCAAATTTTAGAAAGCAATCCAGATGTGGTTTACTCTTGCACAGTTAATGTCACTTACTTCATTTGATGGGGTCACTTTTTAGCTGTCACTAATAATGGAATTAATGGAAATACTTGATATATGAAACTGTACCATTAAGTACAATAGTAAAGTTTCTCCCAATGTATTATAAAATTGACACAAACTAATGTTAGGTGGATTATCAGGATTTATCTAAATGTCCCTAGAGGGCTAAAAGCTAACTGTAAATTACTCTAACTTTCATTTTCAAATCTGACAAATCTTGTTTATATGGTATATAAAACTTTGTTTTCATCAGATTTTGTGGGGGGTGGGGTTTTATATTAAAGAAATTAAGACTACACTATTTAAATAAAAATTTCTTGTTTCTGACTTATTAGAGCTCTAAAGTTTATGGGGCCTGCTTTTCTGAATATTCTACTTGATTTTTTGTTTTTGAGACTGGTGTCACTCATTTTCATACTGACATATTTGAAAGGTTTATTATTTAAAAGGCTTAGAAGATGCACTTCAGCAATGGAGGATTTTTTTTTTTAAGGAAATTGTGGTTTGGATGTCTTACACGTTGGTGTAAGATGGTGGTGGTTGGATGAGTTTTTTTCCATGTAAAAATTTCACTTGGTTACCAGTTGTTCTTTGACTGCTCTTACCAGTTAATAAGAGTAAAGCCTTAGTGGTGATGGAGTATGGCCTAATGAACTGAATGAGTGATTTGCTTAGCAGTGGTATTTTCTGTTCTGTATAAAACTATATAACTGCCCATACTTGATAATCGGTACATAAATGACATTTAAGCTTTTATGCCCTTTTGAGATTAAAATGCCATTTTCAAAGAAAACTTGAAAGAGAAGCCAAAATAGCATAAAGTAAAAGTTGACATTACATCTTTTCACTCACAATAGAGTGAAAAATAAGAGTCTGGGTTTAACTGACTTTCTTGTTTAATAAGTTTTAAAAACCATTAAGCTATAGTTTTTCTTCCCCTCTCAGACTTCTTGAAAATGTATGATTTACCATTCTTAATCCATCAGTTTAAGCAAAACTAAGTTTAAGTACTAATTTAAAATATAAACTTATAGGACAAAAGGGCCGCCCCCGCCCTGCCCCACCCCAAGTCCGAAGGACTGCTTCAGGAAAAGGAAGCAGCAAAGGTCTCAGATTGTCTCAGCATCCTAAAGGACCAAGTACTTTACTTCTGAACTGTAGTGGAAAGATATTTGTAAAAAGTACCACCAGTATGTTTTAAACATATAGATGATTAGCCTAGATTATAAAGTACATAGGATTTAATACATCAGAGGGGGCCTTTGGATACATTTGGTCACGTGTCTAGAAGCACATTTTATACACAGTACAATTTTCCCACTTTAGATGCCTAGGAGGAAAAAAATTCTTGGTAAAAGCTTTAGGAAAAGGATAATTTTTTAACTTGAACTACTTAGTCACTTTTTTCAAGCCACCAAAACTTAGGTCACTTTTCCATAGCTTATAAGTTATGTTTTTACTGATACTTTATTTTAAATCTGAGCCATTGCTGGCAGTACCTTAAAATAAAAAATCACATCATTAAATGTTTTGGGAGAATGTTGTATAAAATTCACAAAAAAAGAGACAGCCAAATGTTTGAGAATTTTAATCCCAAGAAGTAAACATCCTAGAGTCAGACCCCACATGCTGTTCAGTCTTTTACATGTTTCTATGACTGAATGTAATTTAGGAAATCAGGAGTTAAAAATGAAAAATGCAAACATGTTACAGTGGTTGTTTATTATTGCTCTTTATAAACTTATTGGCTTTAACTTAAGGAATATAGGTGTGTAGTTATTTTATCTAAAGCTGTCAGATGTCTGTGGCCCTGTTAAACTTCAGGGACTAGAGAGAGTACAAAAATGCCTATACAATTTGTTTTAAGAGCTTGTCTTTATATTTGTAATTTCAGTTCTATATTTTCTACAGATTGCTTGACTTCCACCTTTTCTCCAACAATAGGTTTATATTCTTGTAGTGTTCACTTTGGTCAAGGTGGTAACCTTTGGTAGAAAATGCCCAAGTCTGAGTTTCTGCCAGCAGCGAGCAGTTGGTTTAAACTGCTGATAGCTACTCCATCAACGGTAGAGAAGAGGCTTGAGTACCTTGGGTTGGTCTCTCCATGTAAGAAGAAATTACCCCCGTTGGAAGAAATAAGGAATACTGAGGATTTTCTCATTTTGTCACATTTGGCTTACGTATGTCATTGAACCATGTAAAATTGCCGATATTCAACCATTGCCGATCTACAAAAATGACAGTATCATATGCATCAACCTAACACTCACTGCTCGATGCAGGTTAAAATCCCTGTGAGGCAAGGGGAGAAGATTCTTTAGGAACTCAGTTTTGAATGTTTTTCTCTTAACTCATGTGGATCTAAAATTTAAAAATAGGAATGAATGTCTTAATAACTACAGCTTGTTGAGAGTGTGAAACATTTTGAGCACAAAATATGCAGCACATAACTTTTCACATGAAGTGTGTTGCATAGAAAAGGTTAAAATACATTCTCTGAGTTGCTGTGGTGTTCATTTCTTGTAAAGGTCTTCCTTCATTTGAGATTAGAACCTTTAAATGGCTGCCTTAGTGACAAAACAAAGCAAAACACTTGTCTCATAATCAGTAACTGTCCTAAAGAACGTGTGTCTTGCAAATGCTGTAGAACTGAATATTTATTTCCTTGTGAGTATTATGACCATTACCAAAGGATTCAGTCAGATTTAGGGCTCTTCTTAATGGATCATGTTGAGAAAGGGACTCATTTTGGTCCCAGTTTGTAAAGGGAAGAGAAGAGAGAATTAAATGTGGAAATCATAAGTGCTTTTCTAACAGGGTTATGCTATTTTGTAACACTAAATGTCTTTTCCTTTTTAAAAAAAAAAAATAAGTTTTTATTATTAATTTTGTCATATATTTCTCAACATTATTTTAACTGTTTTATGGTCTGAATTTGTCTTTTGTCCTAGACATCTTATTTGGAATTTTATTTGCCTCTATAATCTTAAAAATGGGTTCTAGAGTATCCCACTTGCTATTTCTTTAGAGGCTGATGCTTCATTTCTATGAGCAAAAAGCTCATTTGGCAATGTAGTTATTTCAATATTTATTTCTATTATGGAATCCCTGGGGTTCGGAATGTAACTTTGTATATGAAATATATATATAAATATGTATATGAAACATGTATGAGGAGTGTGTTTTGTTTTGTTTTTGCTTTTCCCAGGGGTCTGACCTTGATTTATATTTGAAATGCCCAATCATCCCCCATCAAACATGTCATTCCAAGGGTCAGGATTGTCGCCATTTGGTATCGGCTGAAAGTGAGCAGTGAGGAATACATGAAGAGCATGTTTGCTTAGTGCACGTGTTTAAGTGACAATGTGAATAATAGACAGTAAGGCTTTCTAGAAGTGTGGGTATGCTGAGTAACAACCCACACATGATACTGAGGCATTTGCCAGATCACTCAGTAATAAGAGGAAGGCTATAATGTAGATGTTAATACAGTGTGCTTATTGTGATCCGTTTGCTTGCGAGAGACTCTGGAACGAAGGGTGAGTATAAAACTAATCACGTGGTAGCACAATGTGAACCCAGTGCAGTGGTATGTAGTCTAATGCCGTGTTCTTTGTTTATAAGAATGTGGGGTTCTAACAGGATAGTAAAAAGTAGTCCTGATT EMBV3_03763 TGCCAAAGAGGAAGCAAGATTACCTCACACGGACTCCAACCCCAAAACGACTACTACCTC Gene GeneID:539758|ZFHX2:XM_002690443:299_cdna Constitutive 0 NULL GeneID:539758 10 GENE ZFHX2 NULL zinc finger homeobox 2 EMBV3_40668 GAGATATTCATGCTTCCGGGATGTGGTTTCTACACTGACAGTTCAGCTCCTTGCCCGTAC Gene GeneID:508929|AADAT:NM_001015551:2_cdna Constitutive 1 NULL GeneID:508929 8 GENE AADAT MGC133944 aminoadipate aminotransferase EMBV3_24125 GAGCTGAGAATCACTAGAAAAATTTCCCAGAGTTTGAAACTTAATCCAGAAAAACCTAAC Gene BVT0102_372277 + 0 NULL GK000010.2:38912353-39112073 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020649 1 XLOC_011324 NonCoding TCONS_00020649 XLOC_011324 NonCoding NonCoding - 10:39056808-39057447 - TSS14539 639 2 TCONS_00020649_1 57 0.779342723004695 1 0 0 0 2.89639237227668e-05 0 0 0.000145545555470642 0 0 0 0 0 0 0 0 0 0 0 0 1.12221117296326e-05 0 4.27567113210228e-05 0 0 0 2.16853738257624e-05 0 9.16924663583486e-06 0 0 0 0 noncoding 0 0 0 0 TATATAATGGAATATTATGCAAATATTTAGAAGATTGAGAAAATATTTGATTTAAGAAGACAAATTCTTTTGTCACTTAAAACATTATGCAGTTTATGATTTAGATTTTTTTGGAAAGTTATGAAAAATGAACTGTCTTTCATGAAAATGGAAGGATGACTCCAAGGTCAGAACCAAGAGCCAAGAAGGTAGAGCTGAGAATCACTAGAAAAATTTCCCAGAGTTTGAAACTTAATCCAGAAAAACCTAACATTTTTCCAGCTGGAATTCAAAACTATTATGTATTTTTCACATTCACTTCTCCAATTTTTGAACTGGAATTTTTATAACTATTACTCTTTGTTTCAACTACATTTGAGTTGTCTCAGATGTAGTCAGCTAACTTGTCTCTTTAGTTTCACATGTCAATAGATGGAGAGGAATTATTCCTTAGCAGGTGTCCTTTATTATGGAGAAGACTTCTCTTTCCCTGGGTCTGATTTAGGTTTTGGACTGTGAGTTGATGAGATTATGAAAATTTAGACTGTGACCTGTTGCTGTAATGGAATGAAACTTTTGACAAACTTCAGAATGTATTTTGTACTTGTTAAGAACATGAGTTATTTTGGGCTACAGGGTAGACAATAAAAGATTAATAAA TCONS_00016930 TCONS_00016931 . 5' 517967 TCONS_00016930 TCONS_00016931 . 5' 517967 EMBV3_04909 AGGGTTGTATTTTGGAAGACTCATGGCCCAGTTTTGGTCAGAAAACTTAATCTATTTCTC Gene GeneID:540712|FBXL3:NM_001102246:1_cdna Constitutive 2 NULL GeneID:540712 12 GENE FBXL3 MGC151742 F-box and leucine-rich repeat protein 3 EMBV3_42080 TCGGAGCGGGGCGTTTCGCAGACTCCTAAGAGACCTTCAGAGAAGGCATGGCTTCCGGAG Variant GeneID:512677|PEX2:NM_001100348:22_cdna 66^176 1 EMBV3_23835 GeneID:512677 14 GENE PEX2 PXMP3 peroxisomal biogenesis factor 2 EMBV3_09472 CACCCCTCTCGCTGCTCAGTCCCGCCTCAGTGTCGAGCCAGAAGAGAAGTAAAACTCAAC Variant GeneID:539979|TESK2:XM_002686425:394_cdna 128^227 1 EMBV3_01283 GeneID:539979 3 GENE TESK2 NULL testis-specific kinase 2 EMBV3_31478 TATCACCCTAGCCACATGCTTCCTGGAAGTCCGATATTATCCCCCGCACTACGATCTACT Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_18615 AAGGATCCAGGTGGCGTGTTGGTGGGGCTCCAGAGAGCCCTCGAGGGTGAACAGTGGGTT Gene GeneID:512939|KRBA1:XM_002687142:528_cdna Constitutive 0 NULL GeneID:512939 4 GENE KRBA1 NULL KRAB-A domain containing 1 EMBV3_11755 AAAGGGGGGCAGCGAGAAAGCCTGGGGAAGATGTTCTCAGTGCAACTGAGTCTTGGGGAG Variant GeneID:100125233|STAU2:NM_001103313:242_cdna 118^183 1 EMBV3_34682 GeneID:100125233 14 GENE STAU2 MGC165981 staufen, RNA binding protein, homolog 2 (Drosophila) EMBV3_10535 GACATGGCCCAGTTATCCATAATGCGGAAGCTAAAATTCTACAATACATTTCTCACAGAA Gene GeneID:535021|LACTB2:NM_001076045:43_cdna Constitutive 0 NULL GeneID:535021 14 GENE LACTB2 MGC140671 lactamase, beta 2 EMBV3_11048 GCTGCCACTGAGAACTTTGCAACTCCCTCCCCTGGGACTGTGGTAGATCATACGATAACA Gene GeneID:537068|LOC537068:XM_002689768:35_cdna Constitutive 0 NULL GeneID:537068 8 GENE LOC537068 NULL similar to piwi like homolog 2 EMBV3_07194 CTCCCGTAGACTCCGTAAATTGATATACTGGCTAGTTGGAAGAAGAAAGGTTGGTGTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00792 GCAAAGCTGCAGGTGATACAAACTACTAAGTGTTCTATATTGCATGAAGAGATTTCTATA Variant GeneID:519724|CAB39L:XM_002691786:399_cdna 191^328 5 EMBV3_28434 GeneID:519724 12 GENE CAB39L NULL calcium binding protein 39-like EMBV3_01070 GGACAGCTCTGCATCTGTTCATGGCACCGCATAATTCACAGGAGAACCAGTAGCCTGTTG Gene GeneID:506618|FOXO1:XM_002691748:261_cdna Constitutive 0 NULL GeneID:506618 12 GENE FOXO1 NULL forkhead box O1 EMBV3_22241 ACCGTGAGGGCTCTCTCAGACCTACAGTTCATCAAGGTCACTCGGTTGCAGTACCTCAAT Gene GeneID:100138153|CNNM3:XM_002691165:225_cdna UTR3_Alt 2 NULL GeneID:100138153 11 GENE CNNM3 NULL cyclin M3 EMBV3_25231 CTTTGGGTCAGGTGCATTTGTGTATCTCAAACCATCTTCTGCTGGGTCCAAGGATGAGGG Gene GeneID:782221|LOC782221:XM_002699140:100_cdna Constitutive 0 NULL GeneID:782221 29 GENE LOC782221 NULL similar to olfactory receptor Olr1242 EMBV3_12578 TCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCTCCGGGGC Gene BVV0102_308244 + 0 NULL GK000005.2:42236672-42421553 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251678 1 XLOC_154619 NonCoding TCONS_00251678 XLOC_154619 NonCoding NonCoding - X:68990707-68992220 - TSS188899 1513 2 TCONS_00251678_1 73 0.996695307336418 1 0 0 0 0 0 0 0 0 0 1.73829574858984e-06 4.64180468134775e-05 9.203460434189e-06 3.40541383270375e-05 2.23355912243683e-06 4.53403342864254e-06 0 0.000133832441283578 2.70599377102442e-05 6.42823239526949e-05 0 1.58436539616524e-06 0 0.000219144769580173 7.43353067756718e-05 0.000443057250251592 5.08809810806092e-07 0 0 2.33833433301202e-05 3.03874636937366e-05 0.000398545501984294 XR_230018.1 LOC101909077 PREDICTED: Bos taurus uncharacterized LOC101909077 (LOC101909077), 2e-55 221 88.51 0.114342366159947 0 noncoding 0 0 0 0 0.0537970000172655 0.913418535552382 0.0395273058003059 0.582672743213566 CCCCCAGCAGTCTTGTCTTGGGAGGCATTCCGGAAAGTTACTCTGATTGCACCCAGGGTGGCATCAGAGGCAAGCAAGGTTTTAATGGTGAGGAGCTAGACGTCAGTCAGGGATGCCATCAGGTCTACCCCTGGTGCATCCCCACCCCCTCTCAGTGGTAGTACCAGGAGGGACATGTATGTCGCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAAGAAAAGCTTTGGTGTAAAGTCTGTCTACACCCCCATCTAGAGCAGGGAGTGACACCTTCAGTAGAAAGAGGGCGCTGGTCACTTTTTTTCTCTCTTACAGATGGGAGCTAACAACTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCTCCAGAGCTTAAAGAAGACACGCTTGGTCTTCCTATGTGATACTACACTGCCGCGGGTGGCCGGTTGGTGGGTCTCTTAAGTATAACTGTTTTACAATTAGACTGGTTCTGTAGAAAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGTCCTTTTTCTCTCTGCGAAGTGTGCCAGACTTATGTCCTAAGGATATAGATTTGGGTGTGACTCCTTCAGCTCCCTCCTGTCCTCCTACTTTGCTAGATGAGATGAAGGACAGGAGACAGATAAAGAAAAGCAGGTTTCTCCAATCTATCCCTGGGGTCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTTGCCTCTTCATGAAGCACCCACAAGGAGAAATAATCAGTCTATGAGAATTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGAGAGACTATTTAGAGGACCAAGAAAAATATATTAGAGCTTATATTTAGAGCTCTAAATATTAGAGCTGGGTCCTCACCTCTAAAGGTGTTACTTTGCTTTATGACCTTACTTGGAAAGATGTGATCTATATCTTGGGACAAACACTGACTCCCAACTCAAAGACTCAAGTTCTGGGAAAAGTAGTTGCTTATGGAGATAAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGGATAAGATAGCCACCCTCCCCACTGGGAATCAGGCAGTCCCAACTACAGAACCAAACTGGGACTACAGCACAGCTAAAGGAAGATGGGATCAGAGTCATTGTGCAGATGTATTCTTGAAGGACTCAGGCAAGTGTGTGCTAAGTCTTTAAACTATGGCAAATTGGCAGACATAGAACAGGAGGAGAAGGAAGTTCCTGATAAATTCCTAGATAGACTGAGAGAAGCCCTTCGCTGATTCACTGAGATTGATCCTGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGTTAGATTTCTCACTCAGTTGGCTCCAGATATCCACCATAAGCTATTAAAATGGGCGTATGGACCAAATCAGTCTTTAGATAATCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAGAA TCONS_00247213 . 3' 15514 TCONS_00247213 . 3' 17026 EMBV3_36386 TCCGATACGGAGGCGGTGGATGAAATCAGTATAATGGGACGTGTGGTCAAGGTGGAGAAG Gene GeneID:528741|KCNQ4:XM_002686538:759_cdna UTR3_Alt 2 NULL GeneID:528741 3 GENE KCNQ4 NULL potassium voltage-gated channel, KQT-like subfamily, member 4 EMBV3_28987 AGGCAGGCGTGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGATACAGAACAGGAGGAG Gene BVV0102_345773 + 0 NULL GK000030.2:73059696-73224660 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220566 TCONS_00118040 TCONS_00210913 TCONS_00219592 TCONS_00147538 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00137167 TCONS_00174809 TCONS_00174808 TCONS_00132066 TCONS_00232829 TCONS_00174807 TCONS_00250681 TCONS_00107436 TCONS_00142457 TCONS_00078426 TCONS_00207934 TCONS_00174805 TCONS_00171428 TCONS_00207933 TCONS_00205125 TCONS_00174806 TCONS_00125692 TCONS_00091907 TCONS_00087845 TCONS_00031759 TCONS_00001866 TCONS_00110426 TCONS_00246741 TCONS_00001865 25 XLOC_133883 XLOC_072206 XLOC_129423 XLOC_132911 XLOC_089425 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_083377 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_153624 XLOC_063346 XLOC_086882 XLOC_047314 XLOC_126448 XLOC_103815 XLOC_124587 XLOC_077234 XLOC_056677 XLOC_052634 XLOC_018004 XLOC_066330 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_14647 CACGTGATCAGCATATTAGAAATTTACCTCTCTGTCTGTTAAACTGGCGACCACGGACAC Gene GeneID:280867|PRG4:XM_002694252:225_cdna Constitutive 1 NULL GeneID:280867 16 GENE PRG4 MSF lubricin proteoglycan 4 EMBV3_32534 CTCCCTCTTCTACACAGTAGTGACTCCAGCCCTCAATCCTCTCATCTACACACTGAGGAA Gene GeneID:785277|LOC785277:XM_002697415:118_cdna Constitutive 0 NULL GeneID:785277 23 GENE LOC785277 NULL similar to olfactory receptor 123 EMBV3_06592 GCAGGTGAGCACCAGTGACAGCCAAATGGAGGGACATACTTGCATGGTCAGTTTATTCTC Gene GeneID:535054|PELI1:NM_001078004:113_cdna UTR3_Alt 2 NULL GeneID:535054 11 GENE PELI1 MGC142485 pellino homolog 1 (Drosophila) EMBV3_30465 ACTGAAGCTCACTAATTGGCGATGCGTCTCCGAGCACCTTCTGCGGCAGCTCCCCTGATT Gene GeneID:509264|PHF17:NM_001015559:14_cdna Constitutive 2 NULL GeneID:509264 17 GENE PHF17 JADE1 PHD finger protein 17 EMBV3_17373 CTGGCAGGAACTTTAAAAATTCTCCTCAGTGCAACAGACTCGAATCCAGACAGCTCTGGA Gene BVT0102_284441 - 1 EMBV3_13004 GK000029.2:5831846-5845678 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162959 TCONS_00162961 TCONS_00162960 TCONS_00162962 1 XLOC_099781 Coding TCONS_00162959 XLOC_099781 Coding Coding LOC616308 29:5842767-5851988 j TSS122255 1957 1 TCONS_00162959_2 465 0.0970873786407767 7 0.788503253796095 1.510566771155e-10 1.29759086922322e-10 1.02790474945759e-10 1.15703265149385e-10 7.06269473545574e-11 4.8076143155676e-06 6.66540213207977e-06 3.8737382377173e-06 8.68027612666624e-06 0.00336293956156895 0.000673197885228025 0.000768032912911972 0.00850490922886573 0.0210949760239113 0.00948429634654216 0.00060371511026692 1.43231461462192e-10 2.20680668544928e-10 2.18579171584137e-09 1.13304043437863e-05 7.07664945996096e-11 8.41887633110156e-06 0.000602776909923257 0.000484619894854877 4.76444263611035e-09 9.09906492972167e-11 2.76799079256468e-10 0.000289071487051488 5.85958443379527e-06 6.9360559260074e-06 XM_002699043.3 LOC616308 PREDICTED: Bos taurus tripartite motif containing 64-like (LOC616308), mRNA. 0.0 2720 99.10 0.788962698007154 NM_001136486.1 TRIM64 Homo sapiens tripartite motif containing 64 (TRIM64), mRNA. 0.0 801 73.36 0.686765457332652 TCONS_00162959_2 sp|A6NGJ6|TRI64_HUMAN TRI64_HUMAN Tripartite motif-containing protein 64; 0.0 537 58.39 0.952688172043011 4 coding 0 0 0 0 -0.152910337377551 0.326084754683999 0.19864630338227 0.00951449496887203 ATTGCATTCTTCTCCAGCATCCAGAGCTGTCCGGATTCGAGTCTGTTGCACTGAGGAGAATTTTTAAAGTTCCTGCCAGAAGGAGGTGAGCACCTAAGTTCTGACCTGAATTGAATAGCTACTTACCGAACAGGAATGAAATTTCATCAACTACATTTCATCAAGTGCACCCAAAGAAACATGGATTCAGACACACTGGAAGCCTTCCAGAGTGAACTCACCTGCTCCATCTGCATGAACTGCTTCCTAGACCCCATCACCATAGACTGTGGGCACAGTTTCTGCCGTCCCTGTCTGAGCCTTTGCTGGGAAGAAGGCCAGTCTCCAAGGAACTGCCCTGAGTGCAGGGGAATAGAAGAGAGGCCCCATTTCCAAACCAATATTGTACTCAAGAGTCTGGCCTCCCTTGCCAGACAGGCCAGAGCTGACCACGACCACAGCTCTGAGGAGCAGATCTGTGTGACACACCAGGAAGCCAAAGGCCTCTTCTGTGAGGCTGACCAGACCCTGCTCTGTGGGCCCTGCTCTGAACGCCCCGAGCACGCAGCTCACAGCCACAGTCCAATACACAAGGCTGCTGAGGAATCCCGGGAAAAATTTTTGAAAAGAATGAGCTCTTTATGGAAAATGAGAGAAGAAATGCAACTCATTCTGAATCAGGAAGCTAAAAAAACTCAGTCATTTAAGAAATATGTGACCCTAAGGAAGGTGATGATTAAATTTGAATATCAGAGGAGGCATCCATTGCTCCAGGAGGAGAAGAAACCGCATCTGGAGGCCCTGAAGAAAGAAGCCAAGGAGATTTGTCTACAACTCAAGGAGAGTGTGTTCAGAATGACTCAGTACATAGAAAGACTGAGAGAAATGTACAGAGAGCTGACCGAGATGTGCCACAAGCCGGACACAGAGCTGCTCCAGGCCATGGGAAATGTATTGGAAATGACCTACTTGGCACAGATGCAGACGCCTCAGCCAGTGAACCCAGAGCTCACTTGTTGGCCTGTTGCTGGAATCCTAGACACTCTGAACAACTTCAGAGTGGATAATGTTCTGACTCAGACAACCATTCACCATCTGAGCCTTGATGATGCAAGTGTGATGTCAGGAGATGACCCCCAGGGTATGTCCAGACAGCTTGATGGTGGGGAGAGCTTTGTGGCCTGGGGAGCTCAGGCTTTCACCTCCGGGAGGCATTACTGGGAGCTGGATGTGACACACTTCTCCAACTGGATTCTGGGGGTCAGTAAAGATATCTTGACAAGTGATACTATTATCCGTATTAATTATGAAGAAGCATTTCTTCTATTTTCTGAAAAGGTGAATGACCAGTATAGTCTCTTCACCAACTCCCCACCCTTAGTTCAGTTTGTAAAAAGGCCTCTGGGTAAGATTGGAGTTTTTCTGGATTATGACAATGGAGCTTTGAGCTTCTATGATGTTTCCAGAGGATCCCTCATACACAGTTTCCTTCCTTCCTCCATCTCCTCCCCTCTGAAGCCTTTCCTTTGCCTTAGGTCTCCAAGAATTTTCTAATTCTCTGACCATATTTTTTAAATTCTTCCCTGAGGATGTTGCTATCTTAAGCCTCATGCAAGGTCACAGAACAATACCTGACTGTGTCTGAGCACACTGCAATTTAATGAAACATAATGATTGTATGTTTATAAAATGGCTTAAACATGTTGAATGTATAAATTTGTTAATAAAGTTTAACACAAAAATTTATTATGGAGTATGTCATAGAATAAAATCGATTGCTTTCCTTTCTTAAAAGATGATTTTAGTAAAATAAAAGTTACATTTCATAAAGATTAGCCTATTTAAAGTATATAACCCAGTTACTTTTTTAATATACAAAAATTCATGGAACCAGAGCTATGTAATTCCAGGACATATCCATCACCCCAGAAAGAAATCAATGCCCATCAACTTATATTCCCCATTGCCCCTCCCCCTT EMBV3_22502 CTGAAACTGTTTTTGTGTTCTAAAAGTACGATGAGCCTTACTGTAATTAGTGTGGCAGAG Gene GeneID:514916|LOC514916:XM_002687397:116_cdna Constitutive 1 NULL GeneID:514916 5 GENE LOC514916 NULL similar to dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 EMBV3_04622 ATGGTCGCAGACCTGTCCAAGAAGCAGGGGCCATGGGTGGAGGAAGAGGAAGCAGCATAT Gene GeneID:280800|GAST:NM_173915:12_cdna Constitutive 0 NULL GeneID:280800 19 GENE GAST GAS gastrin EMBV3_37420 GTCCCCCAAATCCAGAAAACATTGCACCAGAGTTGCCACCCCATTTGGAGGTTTTGAAAA Variant GeneID:540487|MYOZ2:NM_001015676:2_cdna 514^697 1 EMBV3_25349 GeneID:540487 6 GENE MYOZ2 CS-1 myozenin 2 EMBV3_24635 GGTGGTGGTTTCTCCACGGATCTGCCTTCTCCTGGTGGCCCTTATTTACATCTACAGTCT Gene GeneID:519317|LOC519317:XM_002693650:233_cdna Constitutive 0 NULL GeneID:519317 15 GENE LOC519317 NULL similar to Olfactory receptor 8J2 EMBV3_12317 GCTGCTGCTCAACTGCTGCCGTGCCTTCCCTGTCAACATGGTGGTGTTCGTGGCTTACGA Gene GeneID:516483|LOC516483:XM_002696837:656_cdna Constitutive 0 NULL GeneID:516483 21 GENE LOC516483 NULL similar to chromosome 14 open reading frame 68 EMBV3_05944 TGGTCTGCGACAAGATCTTCCGCCACTGGTTCTCCTCGTCCCGCGGCAGCTCCGCGGTGT Gene GeneID:517668|LOC517668:XM_002697659:73_cdna Constitutive 0 NULL GeneID:517668 24 GENE LOC517668 NULL similar to Uncharacterized protein C18orf51 EMBV3_35650 GCCCGACCATTTCTAACTGCCAAAGTGAAAATTCAAGAAACCTATGTGGGGTTTCCTCCC Gene GeneID:507300|FOXC2:XM_002694755:510_cdna Constitutive 0 NULL GeneID:507300 18 GENE FOXC2 NULL forkhead box C2 (MFH-1, mesenchyme forkhead 1) EMBV3_17711 ATCCGGGATGAGTGGCTTCTGCCACCTGGAATGCCCACCTTGAGGTGTACTCTTGCCCTT Gene GeneID:789886|LOC789886:XM_002692557:197_cdna Constitutive 0 NULL GeneID:789886 14 GENE LOC789886 NULL similar to Uncharacterized protein C1orf175 homolog EMBV3_08142 TCAGCTGTCCCTGAATGAGTTCGTTGAAGGTGCCCGTCGTGACAAGTGGGTGATGAAGAT Gene GeneID:286851|GUCA1B:NM_174786:225_cdna Constitutive 0 NULL GeneID:286851 23 GENE GUCA1B GCAP2 guanylate cyclase activator 1B (retina) EMBV3_38719 TTAGCCCTCCTCCCCCGCAGGCTTCTGTGTGCTGCTAAATGTATTATTGTGATGCTTTGG Gene GeneID:617179|TSPYL2:XM_002700119:42_cdna Constitutive 0 NULL GeneID:617179 X GENE TSPYL2 NULL TSPY-like 2 EMBV3_33873 GACTGTGCTGATGTAGGCCAAGTGCAATAGGGGGCACCACAGCCGGAAGTAACTTATTTT Gene GeneID:506809|GATA2:XM_002697147:76_cdna Constitutive 0 NULL GeneID:506809 22 GENE GATA2 NULL GATA binding protein 2 EMBV3_11575 GAACAGAAAGAAGCATCATCAACGGGAGTAAATCAGTGGGTTTGATTGCATTAGAAAGGT Gene GeneID:100296627|LOC100296627:XM_002686730:114_cdna Constitutive 0 NULL GeneID:100296627 4 GENE LOC100296627 NULL similar to ATP-binding cassette, subfamily B, member 4 EMBV3_18478 AACCCGTCAGGCAAGATCACCGTACATTGAAAATATTTTCATGTCAAGAGACAATTGCAC Gene GeneID:513095|ENAH:XM_002693998:293_cdna Constitutive 0 NULL GeneID:513095 16 GENE ENAH NULL enabled homolog (Drosophila) EMBV3_21598 CAGGAACAGAATCACCAGCACTGGCTGAAGATGCCCAGCCGACAGAGTCTGAGAAGGAAA Variant GeneID:510019|FAM49B:NM_001046047:14_cdna 97^179 1 EMBV3_19342 GeneID:510019 14 GENE FAM49B MGC127316 family with sequence similarity 49, member B EMBV3_41470 GCTCAGAAGGAAAATTCAGTGGAGAAAAGAGGCTGAATAACTTGGTTTACGTGGAAAGCC Gene BVV0102_443380 + 0 NULL GK000004.2:108378595-108398374 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219108 TCONS_00023537 TCONS_00220099 TCONS_00065051 4 XLOC_132427 XLOC_014204 XLOC_133416 XLOC_039775 NonCoding TCONS_00065051 XLOC_039775 NonCoding NonCoding - 15:53436152-53437804 - TSS48794 1652 1 TCONS_00065051_3 67 0.492130750605327 1 0 0 0 0 0 0 0 0 0 2.38804749300234e-06 1.74342902845358e-06 8.46820353841427e-06 0 0 0 0 0.00215832990964898 0.000673336688688955 0.000138212435096622 0 0 0 0.000507587752667135 0.000855207593021739 0.000284146208514764 0 0 0 0.000552355485243354 0.000152808347257114 3.27543242826895e-05 XM_005199626.1 KIAA2018 PREDICTED: Bos taurus KIAA2018 ortholog (KIAA2018), transcript 4e-141 506 88.34 0.2409200968523 0 noncoding GTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCCGGCTGAATTCCCATCTGGGGCGTGGAGGCTCGTCAAGCCTACTAATTTTCCCTGGGCTTCTAAGATCTTACCGGGGAGGCCTTAGTGTCTCCTCTCCTTTGGGAGAACGGGAGGATGCCTGTGGCCTATGTAGGTGATGTAAATTCCTTATTTTGGAATTTTATTAGCTTTCCACATAAACCAAGTTATTCAGCCTCTTTTCTCCACTGAATTTTCTCACTGAGCTATCCTTATTTCACCACTTTTTATATCCTTAATTAACGTTTAATTAAGCAATTTTTTCCTGATCCTCACCGACGCCATCCCCACTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAATAAAGAAAGCTGAGCACGCAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGCGTCCCTTGGACTGCAAGGAGATCCAATCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATCAGAAGGACTGCTGCTGAAGATGAAACTCCAATACTTGGCCACCTGATGTGAAGAACTGACTCATTTGAAAAGACCCTGATTCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGCATCAGCGATACAATGGACATGAGTTTAAGTAAGCTCCGGGAGCTGGTGATGGACAGGGAGGCCTGGCATGCTGCAGTCCATGTGGTGTCAGAGTCGTTATGACTGAATGACTGAGCTGAACTGAAGGAGCTTCCAGAATGCTGGTGGAAGAAGGCCCAGCCCCTTCCCTTGTGAGGTTCAAAAGTATTCAACTCTGTCCCAAGACAGCTATCCCCAATAAGCTCCACTGCTCAGAGGGGTAAGGACCCCTGGGTCTCCCAGGGGAACTCAGTGGTATGGGAGAGGGGACTTGTGCTGGTGGTTGTGTGTTCCTAGCTGCTGGGCTTCTGAGCAGTGGGTGGAACAAGCCTGGAGCTCAGCACTAACCTTGTTTGAAATCAGTTAATCCCTGAGGTGTGTGAGCAGTCTGATGAGGTGGGAGAAGCAGCCTCCAGAGGGACAGTCTTACAAATAAAACCTGCTATTAATAAGATCTTGTGGGAGTCTAGGTGATTATTGGGGTGGGGTGGGGGAATGTGATTATAATTTGTATCCTAAGCTGATGGAGTAATCATACCAGTTCCACGTAGTTCTCAACTTCCTGAGGCAGGGTGAGGGGGAACAGACAAGTGTATTATCCCTCTGCACCCAAGTCAGCTCAAGACAACCCTGGGAAATGGGAGGGAAAGCCAACTCTGGGCCTCTTTCCGCACTTCACTTCCTGCAGGTCCTTCTCGGGTACCCTTCCAGAGCTCCCAGCTGCTCTTCTTCAAGGTTCCACTATGCCCCCTCCCCCAGGTCTACACCCCAGGATTGTACTCAGGTGTTTGGGTTGTCTCTCTCTATCAGACTTATCCAGCCTGTGTCCAGATCCCTCTGAACCACACTGGGGACAGACCAAAGCAACTTAAGGAGTTGATGGCGCTAGTAGGTTAATCTACCCACTAGAGTTTCACATACATCCCTTCCCTGATTCCATTCACATTTTACCAGGGC TCONS_00061755 . 5' 6790 TCONS_00061755 . 5' 6790 EMBV3_18328 TGATTCAAGCACAAAGCAGTCTGTATCATGCCTCCAGATTCCAGATGGTACTCAATTGTC Gene GeneID:767828|SUV420H1:NM_001076551:143_cdna Constitutive 2 NULL GeneID:767828 29 GENE SUV420H1 MGC137299 suppressor of variegation 4-20 homolog 1 (Drosophila) EMBV3_42022 AAGCAGCACAGTGAAGGGCACCAGCTTTCCCGCTTTCACCAACTAACCACTGAATTGCTG Gene GeneID:512792|SRP14:NM_001100350:148_cdna Constitutive 0 NULL GeneID:512792 10 GENE SRP14 NULL signal recognition particle 14kDa (homologous Alu RNA binding protein) EMBV3_36318 CTGTGGGGTCACAGAGAGTGGGACACGACTTAGCAATTTAACAACAGCAAATGGGGCTTG Gene BVV0102_321330 + 1 EMBV3_16256 GK000013.2:66853782-66863224 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30895 GTGGGATGACGCCATTGCTGGAAGTCCTAAGCCAAAGTATGCCAACACCCTCCAGAATCT Gene BVT0102_159593 + 0 NULL GK000018.2:26289449-26369829 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082747 TCONS_00082748 TCONS_00082750 TCONS_00082751 TCONS_00082744 TCONS_00082745 TCONS_00082743 TCONS_00082749 TCONS_00082746 1 XLOC_051096 NonCoding TCONS_00082746 XLOC_051096 NonCoding NonCoding - 18:26309384-26313785 - TSS62365 275 0.458181818181818 3 0.938181818181818 0.000919094702490902 0.00289896764550353 9.10242183719147e-07 0.000965265834680973 0.000458028066419081 0.000426461394623226 0.00101352145135716 0.00169056616484678 0.000623952778090236 9.4716928770566e-31 1.11502002163773e-24 0 2.8852009967738e-06 0 0.000140324524564464 1.26281963332463e-08 0 0 0.00121446413513896 0.000160476739890872 0.000168708734712354 0 0 0.000243847311254803 0.000676110291518273 0.00181411383109757 0.000865864461115992 0.00010478161999231 1.58705870553255e-20 0 0 noncoding 0 0 0 0 -0.687195238036993 0.0533920852634775 0.0457783536436918 0.407393182133721 AGAAGAGGAGGTGTGGAGCTGTGCTGAGAGAGCGAAGGGTGGGATGACGCCATTGCTGGAAGTCCTAAGCCAAAGTATGCCAACACCCTCCAGAATCTGGGAAAAGTCCATACGTGCGCTTTGATCTAAAATGAACCTCTTGTGGAAAGACTGGCATAGAGTTGGATCATGTGTTTTTATCCATTTTGCCAATACGTCTTTTGAATGGGGAGTTTAATCTGCTTACATTTAGGAGTAATTACTGAGACATCCGAAGGCTTCCCACGTGGCTCAGT TCONS_00082741 s 3' 19935 TCONS_00082741 s 3' 19935 EMBV3_17019 AAGTCCAGGAGAAGTGGCACCTGGTGGATGACCTGTCGCGGCTGCTAGCGGAGCCGGGCT Gene GeneID:513813|TMC8:XM_002696159:101_cdna Constitutive 0 NULL GeneID:513813 19 GENE TMC8 NULL transmembrane channel-like 8 EMBV3_01832 GAGGGGGACACAGGCAGCGACCAGAGGCAGGTGATGCTACCAAATGAATACCCAGGTACA Variant GeneID:517248|IMPACT:NM_001102501:22_cdna 136^264 3 EMBV3_17906 GeneID:517248 24 GENE IMPACT MGC152516 Impact homolog (mouse) EMBV3_20763 TGATCAAGTGTGAAGAAGAACCAGCCACCCCAAAGCCCAAAATCGAGCTTCCTGAGCGGT Gene GeneID:505337|C13H20ORF85:NM_001075198:871_cdna Constitutive 0 NULL GeneID:505337 13 GENE C13H20ORF85 MGC133518 chromosome 20 open reading frame 85 ortholog EMBV3_13023 CGTTCCAATAGTGAGTAAGCCACAGGGCGTGTCAACTGAAGATGTAATAAGCCATCAAGC Gene GeneID:526609|SLC31A2:NM_001034556:35_cdna Constitutive 0 NULL GeneID:526609 8 GENE SLC31A2 MGC127362 solute carrier family 31 (copper transporters), member 2 EMBV3_36051 AACTCTTTAACACTTTCAACACTTCCCACTCCTACTCGCCCTGTCTATCCTACAGGGGGG Gene BVT0102_137316 + 0 NULL GK000028.2:14419071-14774722 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129429 TCONS_00010595 2 XLOC_078142 XLOC_006146 NonCoding TCONS_00010595 XLOC_006146 NonCoding NonCoding - 1:119095118-119095617 - TSS7672 499 0.43687374749499 1 0 0 0 0 0 0 0 0 0 0 0.000140983575865674 0.000423427354036439 0.000104437834745862 2.29658792051115e-05 3.59267167553426e-05 7.40680143991838e-05 0.025124695365351 0.0133486761212941 0.0267494119255209 0 0 0 0.00839921755559733 0.00916196872600163 0.0105106013876167 0 0 1.87868028890701e-05 0.000926188569256957 0.000374068008328217 0.00259806547828066 0 noncoding 0 0 0 0 -0.151593705633075 0.395601522443538 -0.0857792569573372 0.2708092741691 GGGAGAGGGGGCTTGCCAGGGCGCCCGGCCGCAGCGTCCTGGAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTGTCCCTCCTTTTCTTCGTCAATGGCAGAAAATATGATCTGCGCAGAAGGGGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGACGAGGGTCCAGAACATTTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAGTATCTAAATTAAAGGTAGCTTCTTTAACAGTTTCAAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAATATAATAGAAGATAAAGCTTTTAGCTTTCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCATTTTTTCTCTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTACTCGCCCTGTCTATCCTACAGGG TCONS_00001931 . 3' 43517 TCONS_00001931 . 3' 44015 EMBV3_28975 AAAACCAGTTGTGGGTTTTGAACGCCATCATCCTATTAGCCACTGAGGAGGCGTCTTGCC Gene GeneID:100125233|STAU2:NM_001103313:242_cdna Constitutive 1 NULL GeneID:100125233 14 GENE STAU2 MGC165981 staufen, RNA binding protein, homolog 2 (Drosophila) EMBV3_01196 AATGTGCTCAGCCAGAAAGGCCCAAATCCACGCAGCTGTGGTAAAGTTACAGTTCTGTGG Gene GeneID:338049|RHOA:NM_176645:73_cdna Constitutive 1 NULL GeneID:338049 22 GENE RHOA ARHA ras homolog gene family, member A EMBV3_37482 AGCCTCCTCAAGTGATGCCTTCTGTCTCTGCACACAGCCCTTCTTCATGAGTATTCACTC Gene BVT0102_273289 - 1 EMBV3_17708 GK000019.2:28423640-28432862 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01118 GATCTGCTCAGGATGACTTCTACAGAGTCAAGAGGTGAGTACTTGTAACCTTGCTTATTG Gene BVV0101_026015 + 0 NULL GK000029.2:41846746-41855870 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42187 CTGGAAACCGTCTTGCATTTTTGCCACTTGCTGTGGTGCTCCCATTCAAGTTTCTGAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41729 CCTTGTGGGAATGGCCTGTGAACTCTCTGGACCTCCATCTTGTTCCTTGAACAGCCCTGT Gene BVV0102_244828 + 0 NULL GK000017.2:46354750-46432034 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075341 TCONS_00075342 1 XLOC_046556 NonCoding TCONS_00075341 XLOC_046556 NonCoding NonCoding - 17:46397711-46402777 - TSS56840 1153 3 TCONS_00075341_4 62 0.617519514310494 4 0.77314906219151 1.85388540959555e-05 1.82195693579454e-36 7.91101887174805e-05 1.79843847992617e-16 0.000414465707373284 1.96871924665191e-30 2.60926129958157e-13 2.32380355453514e-09 2.72410863998029e-09 1.65949903314221e-09 2.00534810104265e-39 0 2.8735715025916e-40 3.91156628178491e-67 0 0 0 0 1.11122400357152e-12 0.000321684998959059 3.28841467557819e-81 0 0 0 4.35170075547272e-14 1.52579423884441e-09 1.9524862412669e-56 0 9.64515973697184e-14 0 XR_239851.1 LOC101904804 PREDICTED: Bos taurus uncharacterized LOC101904804 (LOC101904804), 1e-19 102 86.90 0.0719861231569818 XR_158870.2 LOC100128002 PREDICTED: Homo sapiens uncharacterized LOC100128002 (LOC100128002), misc_RNA. 3e-20 104 69.63 0.226366001734605 0 noncoding 0 0 0 0 -0.143531830499869 0.266118887908123 -0.00715731551803765 0.879674541614776 GTGGATGGGAAGGAGGTGGGTCCCAGCCATCTCATTTCTAGCCTCTCTCCAGGGGTTCTGGAGGATCTTAGGGCCTGCTGGGATTTCTGCATCAATATTTACCAGGGATATTGGTTTAGTTCTCTATACTATCTCTGTCTGATTTGGATTTAACAACATAACATGGACCTCATGGAATGGGTTTGGAAGTGTCCTCTCCTCTTGAACTCTCTGGAAGAGTTTAAGAAGGATTGGTGTTAATTTTCAGATGCTTGGTAGAATTCACCACTGAAGCCACCTGGTCCTGGGCTTTTCTCTGTTGGGATGTTGGATTAATGATTCAACCTCCTTATTCATTGGAAGTCTGATTTTCTATTTCTTCCTGATTCAGTCTTGTTCTCTGACCAGGGATCAAACCCATGTCCTCTGCACTGGAACCTCAGAGTCTTATCCACTGGACCACCAGGGAAGTCCCCATCCTCGTGTGTTAAGGGTCCCCTTGTGGGAATGGCCTGTGAACTCTCTGGACCTCCATCTTGTTCCTTGAACAGCCCTGTTGAGAAAATGTACAGAAAAGAGTTAACCTGGCACATGAACCACGATTCTTAGAAAGGCTGCTGGCAGTTGTTTTGGCATAATTGAGTCCCTGGCAGCTGTGCCCAGATGCAGCTTCTACAAACAGGAATTTGCCCCAAATTTGCTCTGAGCATCTCCCCTGGATCAAGCCCAAGATCCCTGAGGCTGGTCAGGGCAGCACATAACTCAGTGACCTCTGCTCACTGTCTCTGCTGGTGACAACGGAAGATGCAGAGGGGAAAGAAGGAGAACTTACTCCTGCATTCATTTGTTCATTTATTCAACACATTTTTGTTGAGTCCCTACTTTATGTTAGACAGTTTTATTCTCTGGAACGCAATCTTGAATAAAACAGACCGAACTCTCAGCCCTCATGGAGAATATATTCAAAAGGTGAAACAGACATTTATTAGATAAAATATACAAGGTCGGCTGGTGATTGGCACCCTGGGGAAGGATGAAGGAGCAGGGGGCACGGCAGAGGAGGAGGCAGGGCTGCCAGGCGCTGTTGTTCAGGTTGCGTGCTGTGTCACTCAAACAGCACAGCTCACACCACAGTCATGTAGGAGTCACACACACTGGGATGGTTTCCTGGCAG TCONS_00077183 r 5' 42929 TCONS_00077183 r 5' 42929 EMBV3_25797 CACAGGCTCAGTAGTTGTGGCACACAGGCTTAGTTCCGTGGCATGTGGAATCTTCCCAAA Gene BVT0102_283475 + 0 NULL GK000002.2:132754810-132877446 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28205 CAAAATTGAATACTGAAAATGCTTTTGATTGCGAGAGTTAGAAAATGGCCAGACCTTTCA Gene GeneID:100300295|LOC100300295:XM_002699074:22_cdna Constitutive 0 NULL GeneID:100300295 29 GENE LOC100300295 NULL hypothetical protein LOC100300295 EMBV3_21978 CCTGGCCTGGTCAAGTACCACCAAATTTTTGTTCTTTAATCTTGCAGAAAAGTTGATCGC Gene GeneID:539643|VCPIP1:XM_002692680:58_cdna Constitutive 2 NULL GeneID:539643 14 GENE VCPIP1 NULL valosin containing protein (p97)/p47 complex interacting protein 1 EMBV3_09849 GCCCTGAGACTCAAAGAACGGGAGACGGCCTTGGACATGCTGCACAACGAGAACTCTGAT Gene GeneID:540479|NF2:XM_002694607:124_cdna Constitutive 0 NULL GeneID:540479 17 GENE NF2 NULL neurofibromin 2 (merlin) EMBV3_05470 TTACTCGGGAACAAGAAAGAGCTTATATAGGTCCCCTTCCCCTGAGCCCATCTACAATAG Variant GeneID:541229|SF1:NM_001081614:98_cdna 218^293 1 EMBV3_26581 GeneID:541229 29 GENE SF1 MGC142950 MGC157322 splicing factor 1 EMBV3_01169 CATGGTACATGGCTCCCCCATAACATAGCTCATCTCCCAGTCATTGTAGGAAAGCCCAGT Gene GeneID:539354|SLC35A4:NM_001079612:20_cdna Constitutive 0 NULL GeneID:539354 7 GENE SLC35A4 NULL solute carrier family 35, member A4 EMBV3_08655 CCGCGCAGGAGTCTTGAACCTGGAGAGAGGGTGGGAGCTGGAGCTTGACAGTTCCAAACT Gene GeneID:100137974|LOC100137974:XM_002688739:69_cdna Constitutive 0 NULL GeneID:100137974 7 GENE LOC100137974 NULL similar to hCG2036613 EMBV3_01351 CTCAGCAGAACTCAAGCAGGCACATGAAAGCTGGGAAGACAGACGCTAACAGCAACTCCT Gene GeneID:537195|CREBL2:NM_001076088:110_cdna UTR3_Alt 2 NULL GeneID:537195 5 GENE CREBL2 MGC139506 cAMP responsive element binding protein-like 2 EMBV3_20029 CAATGGGTATAGAAGAATTTTTTCAACAAACAGTGCTGGGACACTGGATATCTACGTGGC Gene BVV0101_013153 - 1 EMBV3_27350 GK000014.2:42330315-42647472 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27811 GGTGGGAGGAAGGGCAAGCTGACTGTGCAGAGCAAAGATGCAGGAAGTAGGAATACTGTA Gene BVT0101_010198 + 0 NULL GK000021.2:63032042-63263759 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119973 TCONS_00119978 TCONS_00119969 TCONS_00119964 TCONS_00119963 TCONS_00119968 TCONS_00119972 TCONS_00119975 TCONS_00119971 TCONS_00119970 TCONS_00119966 1 XLOC_073022 Coding TCONS_00119972 XLOC_073022 Coding Coding PAPOLA 21:62980530-63033856 j TSS89704 3679 1 TCONS_00119972_2 283 15 0.931289263947492 0.00248446660585562 0.00330997329464231 0.00289425276204352 0.00332290388242774 0.00295167390841351 0.000868706988804324 0.00253727870862217 0.00250367976172541 0.00403906341535037 0.000789229733981632 0.00146289860357795 0.00114063965538663 0.000743537831325401 0.00233271630211801 0.00119130066504461 0.016329963398543 0.0106505518141033 0.00246804546248764 0.00173045294060333 0.00252141461756593 0.00100426276895099 0.0061846873906762 0.00374771434556088 0.00676497212756822 0.00391180089343395 0.00343688450979214 0.00169720051916194 0.00178653108670644 0.00154990236595172 0.00163850825718407 XM_005222129.1 PAPOLA PREDICTED: Bos taurus poly(A) polymerase alpha (PAPOLA), transcript 0.0 2179 100.00 0.328078282141886 XM_005267281.1 PAPOLA PREDICTED: Homo sapiens poly(A) polymerase alpha (PAPOLA), 0.0 4372 91.11 0.835553139440065 TCONS_00119972_2 sp|P25500|PAPOA_BOVIN PAPOA_BOVIN Poly(A) polymerase alpha; 2e-174 504 93.09 0.996466431095406 1 coding 0 0 0 0 0.00542351998215251 0.990101325068404 -0.00961397429215208 0.838445429005715 AGGCAGGCCCCCGCCCCCCTCCCTCCCGCCTCAGTGGATCATGCCCAGGGCGGCAGTGGCGGCGGTTGCGGGGGGGAAGTGACTGGGCGGTGCCGGCGCAGGAGACGATGCCGTTTCCAGTTACAACACAGGGATCACAGCAAACACAGCCGCCACAGAAGCACTATGGCATTACTTCTCCCATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCCTGCTCACACAGAAGCTGGTGGAGACTCTGAAGCCCTTCGGGGTTTTTGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAATTTTGGGAAAATTAAATAACCTGGTAAAAGAGTGGATACGAGAAATCAGTGAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGTGGGAAAATTTTTACATTTGGATCTTATAGATTAGGAGTACATACAAAAGGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTGTGTTTTGATGGGATAGAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGACTTGGACTTAAGAGATGACAGTCTGCTTAAAAATTTAGATATAAGATGTATAAGAAGTCTTAACGGCATTATATTGTACTTCTAGCAAGTGCACCAACTGAAAAACAACGCCTAGAATGGGTGGGCTTGGTGGAATCAAAAATCCGAATCCTGGTTGGAAGTTTGGAGAAGAATGAGTTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCACCCAAAGAAAATCCCGACAAGGAAGAATTTCGCACGATGTGGGTGATTGGGTTAGTGTTTAAAAAAACAGAAAACTCTGAAAATCTCAGTGTTGATCTCACCTATGATATTCAGTCTTTCACAGATACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGACATGAAAATTGCTGCGATGCATGTAAAAAGAAAGCAACTCCATCAACTACTGCCTAGTCATGTGCTTCAGAAAAAGAAAAAGCATTCAACAGAAGGCGTCAAGTTGACACCTCTGAATGATAGCAGCCTCGACTTGTCTATGGACAGTGACAACAGCATGTCTGTGCCTTCACCTACTAGTGCTATGAAGACCAGTCCGTTGAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCTCCAGCTGTAACAGCAGCATCTGTGACCAACATACAGGCTACTGAAGTTTCTCTGCCACAAATAAATTCCAGTGAAAGCTCAGGGGGTACATCGAGTGAAAGCATTCCTCAAACTGCCACACAACCAGCCATTTCATCACCACCAAAGCCTACGGTCTCCAGAGTTGTTTCCTCAACACGTTTGGTAAACCCACCACCAAGACCTTCAGGAAATGCAGCAGCAAAGATACCTAATCCTATAGTAGGAGTCAAGAGGACATCCTCACCTCATAAAGAAGAGAGCCCCAAGAAAACCAAAACAGAAGAGGAACAACTTGATACAGAGACAAGTACAACTCAATCAGAAACCATTCAGACAGCGACTTCTCTGTTGGCCTCTCAGAAAACATCCAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGCAAACCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGATTGAATCGGTAAAAACAACCTCAGGGGTCCAGAAACAGTGTCTGCCAACTCAACCTGTTGTCTTCAAATGCTAAAAAAGGAGAACGGAGGGTGCAAGACTAGACGTGACTGAAAGTGGATTGAGGGTTTTTTTGTGACCTCCCTTACTGGGCTAATCAGCACTTGATCGGAAGTCCAGGTTAGTATGTGAAGCCAGGAGTACTATTATTATTGTGTTAGCAACAGTTGCATTAACTATTTCAAAAAATTACTGCCTTTAAAAAAAAAAAAACAACCTCAAGCTATATTTGTATTCATAATTGACATCTGAACTGGGTTTATGTTTGCTGCATTGTTTGGAAAATTTGCAATACAAACTGGCATAAGAATTCTTTATTCTGATGATGCACTTTTATGTATTTTTTATTATTATTATTAGAAAGTAGAAATAATTTTAGATTTTCAGCTTGATGGATTTTCATTTTTTCCTGAAGCATTTCCTTTACCATTAGTCTTTAAATCGGATGCCGTTGCGCAGTGATGTACTGTTATGCTTCAGAGAAAGGATAAGAGTACATCTAGGTCAGTCCCTCTGAGGTAGCTGTAACCTTTAAAAATGAAATGTCAACACTAGGGTATATATTTGACATTGAAAGAATAATTAGGAAATACTTCGTTTTGATGGGGTCATGATTAAGAGATGATATTGGGTTTTATTTATAGAATTGTTTAGAGTGCATACAAATCAGCGATCAGCCAGCGAATATTTTTCTTTGAGCTTTTTAAAGCTCCATATTCTTTTGCCTTCAATCTGTTGTCTTTGAAACCAAGCTTTTTGCTCCTTCCCTCTTCTTCCCTCCCCCACCCCTTTTGCTTGTATGTGTAAGGTAGGACTTCTTTCATAAAAAAAAACAAAATGCCAGTATTTTCTTAAGCCATGATGTGAAACCAGTGACTCTGTGGCTGTATGGCACAGAACACTAAATTTTTGTCCCATGGCTGAAACTTTAGGGTGACTACAAATAATGCCTGTGAAACATGGTATCTATCTTGGATGGCCGTTTGATCTCTAAATATGAGGAATTTTGTACACTCCACAGAACTCCTGTCTATAGTAGAGTTGATCTTCAATATTAAACGTGGGCAAAAACGCATTTTCTCCAAGAATTTTAAACTAATTTTTATTTTTAAATGGTTGACCAAAACTTGTCAGTAAATTTTACATGCAGAAATATTTAAAAATCATTTCTAGCAAGCACTTGACGTCTAGTCAGCTCTCTACTCCTTTTTCCATTTTGTTTTATCCTATCAGTAAATAATTCCTCATAATTACGCCGCAGAGCATTCATCTTCACAAATATACGAGGGAAGCCAGATGTTGATAAACTTATTCTTTCTGAATCTGGACAAAACAAACCTAACATTTTTCTGGTGAGCATGTTTTATGATCCTCCATTGTGCTCCATTCTATCACATGTGCATTTTTCATGTTAAACTGCAATTACTTAAACTCTTCCCTGTTCCCTCTAAATTAATTTTCCAAAGTTGGAGTGTAGTCTTTTCCCCCTTAGGCTATGCATTAATTGAGGCTTTCTTTTCACCATACTTTGTAATGTCTAGTATACAGTATTCCTACTTCCCGCATCTTTGCTCTGCACAGTCAGCTTGCCCTTCCTCCCACCGCCTAAGAAGATAAGATGGTCAGACTAACAGGTGAAGTCTACAAGGTGTCTGTGTGTTTTGTGTAGCTTCAGAGTTAGATCGAAATTGCCAGGCACAGATTTAGTCTTGTCATTTTGTTTACACATTGGGGAAAAAGAATTCAGTTTATTAAACGTTTCATGTAACTGCACCCAAGTTTTGCCAAGCTGGGAACTTGGACCTTTTCTGTGTAGTGACTTTTTAATTCTAGTTTTCATAACCTGGAGATCAGACTGTTGCTTTCGCATGATGTACGTAGTGTCTCATGACTGGAGTTTGCTTTGTTTTATAGTATCTGTACTCCTTGTATTTTTCAAGAGCTATTTTGTAAACAGATGATGTATTTCTCCATTGAAAACACAATA EMBV3_07957 GGGAGCTGGCCAAGAAGATCGGCACCACACCCGACATTATCCTAGATGACCTGTTGGAGA Gene GeneID:282703|CPSF1:NM_174720:20_cdna Constitutive 0 NULL GeneID:282703 14 GENE CPSF1 NULL cleavage and polyadenylation specific factor 1, 160kDa EMBV3_04984 CAGAAGCCAGAGGCTCCATTTACAAACACCGGCAACACTCGGGAGGTAGTATTTCAATAT Gene BVV0102_152282 - 1 EMBV3_26676 GK000014.2:83175604-83201742 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26715 TAGTTGACGATACCACGGTTGAGCCGGAAGGAGCACCATACTGGACCAACACAGAAAAGA Variant GeneID:404193|FGFR2:XM_002698546:29_cdna 391^735 1 EMBV3_30071 GeneID:404193 26 GENE FGFR2 FGFR fibroblast growth factor receptor 2 EMBV3_07603 CCGTAGTCTTATCTTTGGTTGACCGAGCTTTCCTTGACGAGGTTCTTGACACATGGACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32898 AGCAACACCAAGTCGGCTGCGGGAGGAGGGGCCTTTTCACAAACGTTGCCTTTTATAAGT Gene GeneID:100337184|LOC100337184:XM_002690166:43_cdna Constitutive 0 NULL GeneID:100337184 9 GENE LOC100337184 NULL hypothetical protein LOC100337184 EMBV3_22135 GGCAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGTGAACTCCTGACTCCAAGGAACAT Gene BVT0102_365936 + 0 NULL GK000016.2:16633860-17541565 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116428 TCONS_00142231 TCONS_00064414 TCONS_00175042 TCONS_00253638 TCONS_00229680 TCONS_00230670 TCONS_00098386 TCONS_00025644 TCONS_00248765 TCONS_00010709 TCONS_00148196 TCONS_00148295 TCONS_00218369 TCONS_00100748 TCONS_00252954 TCONS_00119942 TCONS_00223408 TCONS_00017462 TCONS_00219680 TCONS_00129415 TCONS_00199603 TCONS_00008833 TCONS_00209538 TCONS_00019980 TCONS_00186849 TCONS_00249264 TCONS_00254102 TCONS_00213731 TCONS_00135588 TCONS_00253081 TCONS_00115736 TCONS_00244609 TCONS_00175572 TCONS_00251673 TCONS_00141681 TCONS_00122096 TCONS_00078479 TCONS_00156829 39 XLOC_070595 XLOC_086656 XLOC_039138 XLOC_104825 XLOC_156577 XLOC_139174 XLOC_140160 XLOC_058632 XLOC_014797 XLOC_151708 XLOC_006260 XLOC_090079 XLOC_090177 XLOC_131689 XLOC_060990 XLOC_155895 XLOC_073015 XLOC_136708 XLOC_009039 XLOC_132999 XLOC_078128 XLOC_121256 XLOC_004390 XLOC_128049 XLOC_010658 XLOC_112900 XLOC_152207 XLOC_157040 XLOC_130524 XLOC_081811 XLOC_156022 XLOC_069905 XLOC_150508 XLOC_105353 XLOC_154614 XLOC_086109 XLOC_073652 XLOC_047367 XLOC_095289 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_29070 CTGGCTCCATCATCAACATCAGTAGCATCATAGGCAAGGTGGGGAACATGGGACAGACAA Gene GeneID:532422|HSD17B8:NM_001046324:146_cdna Constitutive 3 NULL GeneID:532422 23 GENE HSD17B8 FABGL HKE6 hydroxysteroid (17-beta) dehydrogenase 8 EMBV3_33779 TTCTATGACTGGAAAACAGGCTATCGTCCTATCCTGCCCCAGCCAAGGAACCTTCACACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31033 GGACCTGCCAGTCAACCCACCATGTGACAACACAGAAGACATTGAGTATTTCTCCAAGGC Gene GeneID:100337398|LOC100337398:XM_002693914:5_cdna Constitutive 0 NULL GeneID:100337398 16 GENE LOC100337398 NULL hypothetical protein LOC100337398 EMBV3_07443 CGGCGGGGCCGGGGCTGGGGTCGGGGCCAGGCACTGAGAATTGGAAAACCAAGAAGGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19009 GCTTGAGGACATCCGGACTCGTTATGCCTTCTGAGCTCTTTTCCTGTGGGGTTTATCAGA Gene GeneID:504962|SF3B3:NM_001077851:79_cdna Constitutive 0 NULL GeneID:504962 18 GENE SF3B3 MGC139814 splicing factor 3b, subunit 3, 130kDa EMBV3_33816 GCTTGTCTACGTGTGGAGCCGAAGGAACCCGTATTGCAGTTGGACACATATATTTTTTCT Variant GeneID:508465|DERL2:XM_002695769:252_cdna 432^544 2 EMBV3_29127 GeneID:508465 19 GENE DERL2 MGC127058 Der1-like domain family, member 2 EMBV3_17218 ATGGCACACTCAAGTTCAGCCATCGGAACACGCAAGAATGTCTGTGGGGTGACTCTACTG Gene GeneID:536435|SUMF1:NM_001076076:53_cdna Constitutive 1 NULL GeneID:536435 22 GENE SUMF1 MGC139360 sulfatase modifying factor 1 EMBV3_06065 TGCCTGCCCATCCTTGTGCCACGGAATGCAAGCCTGCTGTTAGAGTTCCTTACGTCTCAA Gene GeneID:520668|KRT36:XM_002695989:363_cdna Constitutive 0 NULL GeneID:520668 19 GENE KRT36 NULL keratin 36 EMBV3_10784 CAAAGCTGTAATCAAAAGTCTTCCAAGGAGCAAAAGCCCAGGACCAGATGGCTTCACAGG Gene BVT0101_037305 + 0 NULL GK000005.2:81704072-81748237 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02315 ACTCTCAAAACATCATTTTTAAGGCTCTATACAGAATGTGTCAGTTGACAGGCAGATTTG Gene BVT0102_088781 + 0 NULL GK000007.2:46161888-46188836 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216890 TCONS_00216887 TCONS_00216889 TCONS_00216888 1 XLOC_131369 NonCoding TCONS_00216888 XLOC_131369 NonCoding NonCoding ZCCHC10 7:46187639-46202623 = TSS161653 2148 1 TCONS_00216888_1 170 4 0.856904491757325 1.92817462963641e-11 1.99762584191339e-11 3.93786265053971e-11 1.59625268591069e-09 0 3.05599441435359e-12 5.24554156035894e-12 2.44781470390133e-11 1.95135355610164e-11 2.44274551350179e-10 0.000210525402323719 0.000336112803988699 1.50378923504621e-11 7.61222607005996e-10 2.96239977497212e-10 0.000985138477696849 0.000572025581697407 0.0055952204180846 2.62055554411655e-11 1.1519928211377e-11 0 0.000472302653630547 0.000554095662122066 0.000522893128100569 1.32127008554581e-11 9.18939860682179e-12 4.86385354414411e-12 0.000214542104253989 0.000154542309770886 0.000405846378805932 XR_232900.1 LOC784999 PREDICTED: Bos taurus uncharacterized LOC784999 (LOC784999), 0.0 3739 99.86 0.967411545623836 NM_017665.1 ZCCHC10 Homo sapiens zinc finger, CCHC domain containing 10 (ZCCHC10), 0.0 2172 82.82 0.988826815642458 TCONS_00216888_1 sp|Q8TBK6|ZCH10_HUMAN ZCH10_HUMAN Zinc finger CCHC domain-containing protein 10; 2e-48 159 76.29 0.435294117647059 1 noncoding 0 0 0 0 0.0390603512801802 0.811273000728717 -0.0221179601469045 0.703814076898659 GCGCGGCGGTCGGCAGCCGCGCTAAGATGGCGACTCCCATGCATCGTCTCATAGCCCGGAGACAAGCTGAAGCAAATAAGCAACATGTAAGATGTCAGAAATGCTTGGAATTTGGACATTGGACTTATGAATGCACAGGAAAAAGAAAGTACCTACATAGGCCTTCAAGAACAGCAGAACTAAAGAAAGCTTTAAAAGAAAAAGAAAACAGATTATTATTACAACAAAGCATTGGAGAAGCTAACGTAGAAAGAAAGACCAAGAAGAAAAGGTCTAAAAGTGTAACCAGTTCCAGTAGCAATAGCAGCGACAGTTCAGCCAGTGACTCTTCATCAGAGAGTGAAGAGACGTCTACCTCATCTTCCTCAGAGGACAGTGACTCTGATGAAAGCTCCTCCAGTTCATCATCTTCCGCTTCCTCCACAAGCTCCTCCTCATCCTCTGATTCAGACTCAGATTCCAGCTCTTCCAGTAGTAGCAGCACCAGCACAGACAGTAGTTCTGATGATGAACCACCAAAGAAGAAGAAAAAGAAATAGAATTGCTCCATCCATATTGGACTAATGGACTGAAAACATTAATGTGATTCTCAGAAGGGAATTCAGAATGTGTTATGGCCAAATAGGTTAACTGGCCAACATTTCTAGAGCTCAGAAGTTTCTAAATGTTTTACATTGTAAAAGCATAAAAAGTATTAATAATGGATTATATACATATATATATATATACACATATATATAAAGACTTTTTTTATTTGAGGGATGAATCTTGTTTTTCTTTTTTATCTTTAAAATATATCTCTAAAATCAATCAAAGCTGAAATCTAGTAAATCTGTTTTTGTGATGAAACCTATCTTTCCTCCCCGTGAAATAAATGCCATACTCTGTTCCATGTTAGTGCTGTGTATCAGACATTTTTCAGAATAAAGGATCGTAATTTCTGGCAGTGAATTTCTAATGCTTTTGGCTGTATGTTATTATGTAAGATTTAATGCATTAGAAGCTTAGGAGTTTTCCTACTGTTACTAAATGTGCTCTATTTTTGTGTTTATGTTCAGAAAGTTGTTCTGACTTCTTGTCCTAAATGGAAAGTTCAAGAAACCTATTAATACATTTATACTTTTTGGATGGTACAAGTTTCAGGTTACTGTGTTTTATCATTCATTTTCTTCTGGTTCTTAGAGTTACCCTTTTCTGAGGAAAATTATTCTAGAGGAACTTAAAAAAGAACAAAAATTCTGAAACCACATAGTCTAGTCTTGGTGCCTTTGGATAAATTCAATGTGTCAGAAAAGAAAGCAGTCATTTAAAAAGCTAGCTTATGTAAAAGGGATATTAATACTTTTGTGTGTCAATATGCTATAAAAGATACCATTCAAAGGGGTAGGAGGAAGAGATGTGATTTTTACAGAAAATTAGAGTGATGTTGGCTGCCTTTTACTAAATTTTTTAATGAAGTTTTCATAAAGATTGCCTTTTACCATTTTGCAATTGTGGTATGACTGTTTATATGGTAACTCATCATATATGGGTCTACTGCATAAATATGAGTGACTTGGATTAATCTAGTGTGTTTATATAGCATATACACAGTTGAAATCTAGCATGAAAGTTTAAAAAGAAATACTGCCAAGTATTTCTTAAAAGTAAAATACTCTGTCATGATGAAATTATTTGATTTAACATCACATTATTTTGTGGTGTGTTTTAAACTTTTTTGGAAAGAGGTATCGTTTGTAGAAAAATCTTGATTTAGGTTAAATATAGGTTTTTAAAACTACAGATGTTGTCTTTTTATATTTTTATGAAAAAGCAGTAGAAAATTACTTTTGAAGGAAGTGAACTTCTATTTAAATGTTTAAATATATGTATGTTGTCAGTTTAAAGATCTGTAATTACCTGTTTTACAGAATCATCTGCTTTCAGTGATTATAAATACTCTCAAAACATCATTTTTAAGGCTCTATACAGAATGTGTCAGTTGACAGGCAGATTTGATAAACTACTAATGAAATGCAGTTTACAATGTTTGTAATCTCTGTAAGGGCAATTTTAGCGGTGAAGAAACTTGGAAGGGAAACGTGTACATAGGTTATATCACTTGCAATCAAATAAAACTCAGTTTGTGCTGATGAGCTTAAGCTTCTT EMBV3_13554 CAGAACATGGATGAACCCTGAGAACATTGTGCAAATTGAAGTAAGCCAGTCCCAAGAGGC Gene GeneID:100299281|LOC100299281:XM_002694104:397_cdna Constitutive 0 NULL GeneID:100299281 16 GENE LOC100299281 NULL similar to crystallin, zeta EMBV3_06226 GTTGTACAGGCTGGACAGATTCAGCAGCAGGTCCAGGGGCAGCCATTAATGGTACAGGTC Variant GeneID:539584|NFYA:NM_001014956:326_cdna 248^334 1 EMBV3_24231 GeneID:539584 23 GENE NFYA CBF-B MGC139148 NF-YA nuclear transcription factor Y, alpha EMBV3_25225 GACTTCTACTCAGAACTACATGACAAGGAACTTCAACAAGGCAGCAGCCAGGAGCCTGAG Gene GeneID:530502|GSG1:NM_001075933:95_cdna Constitutive 0 NULL GeneID:530502 5 GENE GSG1 MGC127755 germ cell associated 1 EMBV3_07932 CCAGGCTGCCACAACTGGGCCTAAATCCTGTACATAATGCCTGATGATTTCGTTGGGCCT Gene BVT0101_001093 + 0 NULL GK000003.2:100401196-100411036 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174236 1 XLOC_104559 NonCoding TCONS_00174236 XLOC_104559 NonCoding NonCoding - 3:100407243-100410288 - TSS129351 681 1 TCONS_00174236_1 35 0.0837004405286344 2 0.776938239159001 6.33656968812661e-105 0.000127548726218674 0.000111568275918228 3.91902364867191e-129 0 2.03262790246601e-37 2.58492724144798e-09 2.76536129907087e-156 2.01017596234289e-160 0.000725539074389658 0.000703601380061613 9.00208168638106e-05 2.88036940100008e-05 1.05914131479629e-50 1.18069572445222e-216 0.00202042106357494 0.0033041389412974 0.00354609968923512 8.56311178244359e-05 6.52783553569934e-14 6.80903611311428e-31 0.000571186980986422 0.00121857322332823 0.001474639503479 2.43651442060374e-05 8.25098252109001e-48 8.65618288372467e-73 0.000303236905958326 0.000106560712155893 0.000113323407421846 XM_003585920.2 LOC100847274 PREDICTED: Bos taurus leucine-rich repeat-containing protein 41-like (LOC100847274), mRNA. 5e-167 590 100.00 0.47870778267254 0 noncoding 0 0 0 0 -0.217960956747239 0.0888371453953286 -0.0153894576779491 0.770532369697223 ATCCATCCTCACTCAACACATTTTTCACACATTGCTGGCCCACACAATCTTGAAAGATACTTGCAGGTAACCCCAGCAAGGCTTAACTTCACAAGTGAAGTAGATGGTTACTATGAGATCTGGGGCTAAGATTACAGACAAATGTGAAAATTAAGGTGTAAGTTTCCAACTATAAGGCATGTGGAATATGAACTGTAGATAACTAAATACTTGGGTTTTTCAGACATTTTATTGGTTCATGAAGACAATGGGAGAGAATACTTGAAATTGGAACACCTCAGACCTGTGATAACCAATGAAAGCAACATGACAGTGATTAAGAGCATTTGCTCCAGGGCCAGGCTGCCACAACTGGGCCTAAATCCTGTACATAATGCCTGATGATTTCGTTGGGCCTCAGTGTCTGTGCTGAACGGCAGGGATTGCATCTAGATCTGGAAGTGGGAAGCTAAAGGAGCTGAATGTTACTGAACCTAGTGTATACTCACAAAATAAATCTGCAGTTCCTGATAAGAGCTTGTTATCTTGTCATCTGGCCTCATTCACCATGTAACACCCAATTCAAATGATTACTTCCTAGGAAAGACTTGTTCTCTTTTCTTTCAACCTCCTTGCTACACTCAGTCATACGACTTGCCCTGGCATACAGGATGTATTTGTTTGCAGATTTCCCCAGTAAAC TCONS_00170942 r 5' 0 TCONS_00170942 r 5' 0 EMBV3_00266 TTTGGAGAAAACATGGCTGTTGGCCCTAACACTTGGATGAAGCGAAGGCTGGAATGCAGC Gene BVV0102_388965 + 1 EMBV3_16344 GK000023.2:49151655-49282978 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18095 AGGCCTGGACTTGGTTTTCAGTACCTCAGTTCCTCTTCCAGCTAACTCCTGCATTCCTAG Gene GeneID:506954|TLCD2:XM_002695684:222_cdna Constitutive 1 NULL GeneID:506954 19 GENE TLCD2 NULL TLC domain containing 2 EMBV3_39440 ATGACAGCGCCATCGCCCCGTCTAGTGAGGACGGAGACCTCACAGACACTGTCAGCGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32678 CCATCTGGGGTCGCACAGAGTCGGACATGATTGAAACGACTTCGCAATGCTGCAAGCAAT Gene GeneID:508619|IFNGR1:NM_001035063:17_cdna Constitutive 0 NULL GeneID:508619 9 GENE IFNGR1 MGC129098 interferon gamma receptor 1 EMBV3_00135 TCTGGCCAAATTGTCTACGGATGTGCCTTACTGCTTGTTCTCCTGCTGATGATCCTGACT Gene GeneID:525820|LOC525820:XM_002695394:270_cdna Constitutive 0 NULL GeneID:525820 18 GENE LOC525820 NULL similar to cationic amino acid transporter 5 EMBV3_30632 GATGCCCATCTCCAGCTGTTTCTTGACTTTGTACCCTCTCCACCGTTGACCGTGCCTTAT Gene GeneID:511222|ACADS:NM_001034401:126_cdna Constitutive 0 NULL GeneID:511222 17 GENE ACADS MGC127548 acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain EMBV3_26178 AATGGCACACTGATTCACCCAGAAGACATTACCAGCAGTTCGCCTGTGGTTCCTCACTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08318 GGCAGGAGGCAGGCGGCTTGGGACAGGCTCAGTGCAGGTCAGAACAACCTTCCCAATAAA Gene GeneID:539769|CNR2:XM_002685711:400_cdna Constitutive 1 NULL GeneID:539769 2 GENE CNR2 NULL cannabinoid receptor 2 (macrophage) EMBV3_29515 GCTGTGTGGACCTGCTCATCCAGAGGGGCCTATCAAAGTCTGTCTCTTACTCTGTCCTGA Gene GeneID:523858|KCTD19:NM_001105392:291_cdna Constitutive 0 NULL GeneID:523858 18 GENE KCTD19 MGC142954 potassium channel tetramerisation domain containing 19 EMBV3_15793 TGACAATTTCAGCCTGAGATGTTAAGCCAATTGTCGTCGTGCGAAGCGCCCTTCCACTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14069 CATATGCAGAGCAAGCACAGAACATCTGAGGAGACGTGGGAGGAACAACTACACTCTGCT Gene GeneID:786798|LOC786798:XR_083744:7_cdna Constitutive 0 NULL GeneID:786798 8 PSEUDO LOC786798 NULL similar to Bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase) EMBV3_11355 ATGAGAAGGAAGATGCTGCCAGTTCCACGGGTTTCAGGGATTCTCCTCATGGTCTGTCTC Gene GeneID:616886|IGFBPL1:NM_001099161:41_cdna Constitutive 0 NULL GeneID:616886 8 GENE IGFBPL1 MGC152408 insulin-like growth factor binding protein-like 1 EMBV3_38057 TGTCTCCTTTTATTGCTCCCGTACAAACCCTTGCCCTCCCCCCTGTAAACATGGTGCTGT Gene GeneID:100337499|LOC100337499:XM_002697344:299_cdna Constitutive 0 NULL GeneID:100337499 23 GENE LOC100337499 NULL cytochrome P-450 steroid 21 hydroxylase-like EMBV3_24238 TTAGAACCACTGAAACAAGAATTTTATCAGGGACTAGCACTGGAGTTGGAAGGCAAACAA Variant GeneID:286841|MUC12:XM_002687375:9_cdna 923^976 1 EMBV3_38520 GeneID:286841 5 GENE MUC12 BSM mucin 12, cell surface associated EMBV3_28818 TGTGGGAACCAGAACTTCGCCTGGAGAACAGAGTGCAACCAGTGTAAGGCCCCAAAGCCT Gene GeneID:534073|EWSR1:NM_001109800:71_cdna Constitutive 0 NULL GeneID:534073 17 GENE EWSR1 MGC179351 Ewing sarcoma breakpoint region 1 EMBV3_36014 GCAGTATGACTTCTTCTCCCACCCCTTAAGAAAGTCAGAGCAGGAGGCCCCAACAGCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41888 ACTATTCTGCGAATGAGGAATTCAGACCAGGGGGACTTGACATGCTCATTCTCAACCACA Variant GeneID:282589|HSD11B1:NM_001123032:22_cdna 146^388 3 EMBV3_07499 GeneID:282589 16 GENE HSD11B1 NULL hydroxysteroid (11-beta) dehydrogenase 1 EMBV3_39237 ATGGTACAGATCAGGAAGAAATTCGAACTGGATGTCTCAGAACTAAGGAATGAATTACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16720 CGGATCTGCGGCATCTGTGTGAGGAGGATGGATCACCACTGTGTCTGGATAAATAGCTGT Gene GeneID:512177|ZDHHC23:XM_002684779:305_cdna Constitutive 0 NULL GeneID:512177 1 GENE ZDHHC23 NULL zinc finger, DHHC-type containing 23 EMBV3_16477 CCAAACCTAAAGAACTTGAAGATCTTGAAGCAATGATCAAAGCTGAAGAAAGCAGTAAAC Variant GeneID:100301114|LOC100301114:XM_002685353:230_cdna 590^643 1 EMBV3_39357 GeneID:100301114 2 GENE LOC100301114 NULL similar to formin binding protein 3 EMBV3_14660 TGGGCCGAAAGAAAACTGGTGAAGAGTACTTTGGAAGTGTTGCTGAAATGATCAAGAATC Gene GeneID:510393|BLNK:NM_001046054:102_cdna Constitutive 1 NULL GeneID:510393 26 GENE BLNK MGC127870 B-cell linker EMBV3_25435 AAGGGAGTCAAGCCTCCTGAGGCGTTTGGAGAGAGGTCGCGAGATTGGTCTCTAGGCCAT Gene BVT0102_442878 - 1 EMBV3_40879 GK000003.2:86718973-86766526 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00178735 TCONS_00063810 TCONS_00162571 TCONS_00142474 TCONS_00178732 TCONS_00230354 TCONS_00010832 TCONS_00218950 TCONS_00168478 TCONS_00098202 TCONS_00123275 TCONS_00063805 TCONS_00230831 TCONS_00129561 TCONS_00117596 TCONS_00167122 TCONS_00157807 TCONS_00255144 TCONS_00231774 TCONS_00066112 TCONS_00230834 TCONS_00186490 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00157808 TCONS_00149043 TCONS_00071703 TCONS_00161424 TCONS_00131535 TCONS_00238280 TCONS_00116087 TCONS_00101341 TCONS_00111145 TCONS_00011615 TCONS_00222116 TCONS_00232767 TCONS_00106013 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00238291 TCONS_00223049 TCONS_00218949 TCONS_00054136 TCONS_00162570 TCONS_00158314 TCONS_00071451 TCONS_00186834 TCONS_00230833 TCONS_00154284 TCONS_00071397 TCONS_00157046 TCONS_00011614 TCONS_00010443 TCONS_00212984 TCONS_00222183 TCONS_00178734 TCONS_00222175 63 XLOC_090921 XLOC_108508 XLOC_038536 XLOC_099452 XLOC_086899 XLOC_108505 XLOC_139844 XLOC_006383 XLOC_132269 XLOC_103118 XLOC_058448 XLOC_074829 XLOC_038531 XLOC_140321 XLOC_078274 XLOC_071762 XLOC_101958 XLOC_096262 XLOC_158076 XLOC_141262 XLOC_040830 XLOC_140324 XLOC_112542 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_096263 XLOC_090920 XLOC_043473 XLOC_098315 XLOC_080240 XLOC_144947 XLOC_070256 XLOC_061582 XLOC_067045 XLOC_007166 XLOC_135425 XLOC_142251 XLOC_062697 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_144958 XLOC_136355 XLOC_132268 XLOC_031945 XLOC_099451 XLOC_096768 XLOC_043222 XLOC_112885 XLOC_140323 XLOC_094044 XLOC_043168 XLOC_095506 XLOC_007165 XLOC_005994 XLOC_130301 XLOC_135492 XLOC_108507 XLOC_135484 Coding TCONS_00080098 XLOC_048982 NonCoding NonCoding - 17:37120691-37121809 - TSS60038 1118 1 TCONS_00080098_2 78 1 0 4.78753310707479e-05 9.4932339466094e-06 3.43843363013195e-05 6.06723695704804e-05 9.08988479709594e-05 6.51622043694459e-05 5.11705138933887e-05 0.000183253491462736 0.000182535013518509 6.81731190344836e-05 6.83946942535167e-05 9.87829255393725e-05 2.67502466787108e-05 0.000166312604361232 0.000148086674799101 0.00241017982236107 0.000337250628166226 0.00122244424164627 9.19664755724166e-06 7.06056940996818e-05 1.47837106007788e-05 0.000312153434511185 0.000488458609486617 0.000555318184846704 2.63112376039151e-05 3.96200823018996e-05 2.60508865532784e-05 6.2278174362547e-05 0.000192546472292626 0.000120648690903383 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 3e-39 167 74.63 0.237924865831843 0 noncoding 1 1 1 1 -0.069690739815313 0.656150057551822 -1.10078665842033 0.00368417958290911 GCCGTCGTACCTCGCGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACACCAGAGCCTCCCCCGTCATCGCGACTTGAGGGCCTTCGTCTCCTGTATGGCCTAGAGACCAGTCTCTCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCAAGAGCAGAGCGGAGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAATGCAACCCCGAGATCCCTTTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTGGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCAACACAAGAGGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCTGCAACTCGAGAAAATCCACGTGGTTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGTGTCTCAGGAGAAGTCCCACGTTAGGTATTGGAGGTCGAAAAAGGGACTTGGCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTGACGGTTAAAGAGGAACACCGAGGTTTTCCCGAACCACTTCCTCTGAGCACCCTTCTGCCCTCCTGATCTCGACAGGAGGGTCGACTCCGCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTAGCCTCGTGGGTGCTTCCACATTGTGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCACCCTGTGAATGAAGTCAACACGAAGGGGCAGTCACTCGTCCATGTATCGTCCGGAAAAACCCCCAGGTTCCAAATACTTCTCTATTAGTGGCCTCTCTCCCCGGGGAGACCTCTAGAGATAAGCGGAGTTCCATGCCACAACCCAAGACGAGGCCTGACTCTCCTGTTCCCAGTCTGCAGGGACCCTGCGATCAGAGTCTGAAATCAAAGGAACCCGGACGTTCCTGCCTCTCCTGGAGAT TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 EMBV3_12230 GACCCTTGCTGGGTACGGATAGCACTGGCAATGTGAGGACTGGGTTATGGAAACACGAAA Gene GeneID:541147|GPR125:XM_002688170:91_cdna Constitutive 0 NULL GeneID:541147 6 GENE GPR125 NULL G protein-coupled receptor 125 EMBV3_11439 GGCTCAAGAATGGGGCTGTCCTTTCATGGAGACATCGGCAAAAAGTAAATCAATGGTGGA Gene GeneID:515181|RAP2C:NM_001075700:80_cdna UTR3_Alt 2 NULL GeneID:515181 X GENE RAP2C MGC143331 RAP2C, member of RAS oncogene family EMBV3_33301 CAGTGGGAGGGTGAAATCCACAAAGGTGTGCAACGGCAGTGAAAGACACGGCTCAAATGT Gene BVV0102_295243 + 0 NULL GK000026.2:13474855-13490158 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41298 GTCTATGAAGATGGCCAAGTGGGAGACGCAAATATTAACACGCAAGAAGGAGGCATTCAC Gene GeneID:511595|PARP8:XM_002696340:14_cdna Constitutive 0 NULL GeneID:511595 20 GENE PARP8 NULL poly (ADP-ribose) polymerase family, member 8 EMBV3_30145 GGCATTCTTGGACGCCCTGCCACAGCTTATGGATTCCGCCCTGATGAACCTTACTTCTAT Gene GeneID:518402|KIFAP3:NM_001035329:99_cdna Constitutive 0 NULL GeneID:518402 16 GENE KIFAP3 MGC128520 kinesin-associated protein 3 EMBV3_41605 TTCCACTTTCCGGGTGTGGCCGCGAGTCGGTACATGGAAAAGAGGAACAAGAGCAGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05886 GCTTGGGGAACGATGATGGTGCACAAAGGCTTAGATTTGCCTTGTCTCAAAATAAAGAAT Gene GeneID:535490|IFIH1:XM_002685338:188_cdna Constitutive 0 NULL GeneID:535490 2 GENE IFIH1 NULL interferon induced with helicase C domain 1 EMBV3_37279 CTTTACATAGGCCTCCTCGACTAATCCAGCTCCCCACACTGCACCCCACTTTAAGGCCCA Gene GeneID:618415|SYNGR3:NM_001082464:297_cdna Constitutive 0 NULL GeneID:618415 25 GENE SYNGR3 NULL synaptogyrin 3 EMBV3_36139 ACACAGCTGGCCAAGAAGAGTATGACCGACTGAGAACACTCTCCTACCCCCAGACCAATA Gene GeneID:531038|LOC531038:XM_002700019:92_cdna Constitutive 0 NULL GeneID:531038 X GENE LOC531038 NULL similar to ras homolog gene family, member G EMBV3_04496 ATAAAGCCAGTATGATAGCCATGATGGCAGGTAGGCTTTAAACCGGCCGGAGGCATCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14265 AGGACACCAAACTGTTCTGCTTGTTACCTTCCCTCCATCTTCCTCACTTTCACAGTCCCC Gene GeneID:282298|PABPN1:NM_174569:38_cdna Constitutive 0 NULL GeneID:282298 10 GENE PABPN1 MGC148311 MGC148768 poly(A) binding protein, nuclear 1 EMBV3_38038 AGAGAGTGATACTGTTAGCTGCCTATAGCCGTGAGCTGATGATGACGAAGCGTTGGCTGG Gene GeneID:540881|KCTD10:NM_001101216:252_cdna UTR3_Alt 2 NULL GeneID:540881 17 GENE KCTD10 NULL potassium channel tetramerisation domain containing 10 EMBV3_43767 TTCAGAATTATTTTCCACATTGAAACAGTTGATGTACTATAGTGTATGTCTCCTACCTAG Gene GeneID:100336690|LOC100336690:XM_002687886:71_cdna Constitutive 0 NULL GeneID:100336690 5 GENE LOC100336690 NULL RAD51 associated protein 1-like EMBV3_09368 TAAGGGATGGTTTTGCAAGAATAAGACTTGACCGAGATCGACTGCCAGTAATAGAGCCTG Gene GeneID:527312|NSMCE4A:NM_001038678:23_cdna Constitutive 0 NULL GeneID:527312 26 GENE NSMCE4A MGC134552 non-SMC element 4 homolog A (S. cerevisiae) EMBV3_18466 TTGGTAATGTCCCCGCAGGGCTACCCTGGTGGCTCAGTGGTGAGGAGTCTGCCTGCTGAT Gene BVT0102_439731 + 1 EMBV3_17311 GK000016.2:78623833-78755027 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068353 1 XLOC_041661 NonCoding TCONS_00068353 XLOC_041661 NonCoding NonCoding - 16:78661347-78664033 - TSS51188 2686 2 TCONS_00068353_2 94 0.133283693224125 1 0 0.000288727451130161 0.000188140085187961 0.000163967330528539 3.9406874364153e-05 0.000203191530147105 9.26027494542952e-06 0.000111093471908484 1.5978716514616e-05 0.000126312620062562 0 0 1.6316487384744e-12 2.45694487351427e-05 5.41310990324115e-06 5.47974369230876e-06 0 0 8.88185126008799e-05 0.000258866107220455 0.000390221858394578 0.000236212373568123 0 0 0 4.66310313143759e-05 0.000104020729477878 0.000163602429886116 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 3e-32 145 70.91 0.11578555472822 0 noncoding CTTTATTTCATTAACTGGGAAGTTACAAACCAAAAAAAAAAAAAGAAGTCTTAATGAAATTCACTCTAAATATACTTACACACATATTAAAGCTGTTAACCACAAACTACAAACGGAGTATCACTATAAACCGGGAAAATGAGAAAACCCAACCGACAGAGGTATACTTGATCCTCAGTTCAGAGATCTTTGCACCACAGCAAGTTTGCATCATTCTAATTAATTCAGGTGTACCCGGCTTTCTTTAAAATTAAAATGCTCCCCTGAGGGCTGTCTATCAGGTGTTCACACCTCACTGTGAATTACTTTCATCAGATAAATACATTAAGTAACACCACCTACTGAAAGCAACTGTGATTTGAGGAATGGTGAGCCAGGTCCGTAGGGCAGGGGAGGGCTGTGCCGGGCTAGCTGGCCAGGGTCTCCGTGCACTCACGGGGCAGCATGACGACGAGGCACACACCCGGAGAGTTCCCAGGGTCAGAAAAGCCATTAAAGTGATGCCCTTTACGGACACTTCCAGGTCCCTGATTCTACGTTCTCTGGTGAAGTGTGCCCAGAGAACCCAGAGCCTGAAACAGTGTCTGACCCCAAGGATCTGTTCAGTGAATATTTGTTCAACTGTTGAAGCACCATTATTAAGGTATTAAGATGGCTTTTAAAGAAAAAGAATGAAAATTGAGAAGGGTACTGAGGTATTACTATTAAAATCTTTTCTTTAAGAATGTAACAACTTTTATCAAGCAGGTGAAATTTGTGGAAGTGAAGCTACATTAGTAAAAGATATAAAAAGAAGTCGCTGAGTAATAATCCTTTTGATTAAAGCTGCAAAATTAAACAACATGTGAATAAATAAAAGCACCTAATGAGACAAGTTATAATCAGAAAACGAGCTCTGCAGCATCCCTATCAGAGTGAGAATCGATAAACGCTGAGCCCTGAAGATGACTCGCTTCCTACCCTCCAGGCAGCTGCGGGGAGGAGGGGGTGATCTCAGAGCCAAAGAGAAAAGTGCACCTGTTCTCAACTACGTTCCAGGTAGAACCGAAGGGTCTGTCTCGGAGGTGCGCCCCTGAAGAGCCACAGGAAACTCTGCCCCTGGTTAGCAGCTATGAGAAAATAAGCGCTGCTTTCTGCTCCAACATGGGGTACGCTGTCGGAGCTCTCACTGAAGATCTGCTCTAATTCATCCTGGCGCACCTGGGGTGAGAGAAACTCAAGAATTCCTTAACCAACACGAAGCTGGAGCAGAAAAGCATCGTAACTGCATTTTACTCACAGATTTTGTTTTCCCCCCACTTCAGGCAACATGTAAATCTCCTAGACCATCTTATGTATGATTCACCAAAGTTCTACTCTCTAAATGCCAGGGTTTTCTGGGGTTTTCAGCATGTGTGGAGGGGTATCAATGGGCTTCAAGGTGGCCTCCACAAACACACATACACGGCACGTGTTCCAGTAAATCCTGTGATGGGAGGCAGGGGCAGAGTGGATGTAGGGCCTGAATCGGGGAGGGGGGGGTGCCTGAGTACAGGAACCCCAAACAGCCCCGCCCCAGGCAGAGGGTGACAGGTTAGTAATGTCCCCGCAGGGCTACCCTGATGGCTCAGTGGTGAGGAGTCTGCCTGCTGATGCAGGAGACGGGGGTTCGATCCCTGGTCCAGGGAGATCCCACACGCTGCAAGGCAGCTAGCCCGGGCACCACAATTGCTGAGCTTGTGCTCTGGAGCCTGGGACCACAACTCCTAAAGTCCGCACACCCGAGACCCGCGCGTCACAACGAGAGGCCACCACGGCGAGCAGCCGCCCGAGAGTAGCCCCCGCGCGTCACAACGAGAGGAAGCCCACTCGCAGCAACAGAGACCCAGCGCGGCCAAAAATAACTACATGAATCTAAAAATTAATAACGTCCTCGCTGCTGCCCACCAGCCAGCACGCACTGAGGGTCACGTCCACAAGCGCGGCCTCTGTGCACTCACTGGACCAACATTAATCTGACCAACAGTCAGACACTGCGCTCAGACCACTTTCTGTCGTGCATTCTGTAAATGCTAAACATGCCAGCGGCTGCACTACACTGTTCCTTAAGAATACAGTCGCTGGGTCACCGGCTGGTACTCGAAGAGGTCACTCGGAGCAGGGCAAGCAGATGCTAAGACCTGTCTGCGTGTCTCTGCATTACTATCTTAGATGTACCTGAAGAACGTGATACAGGCAGAAGCAAAATGTTACGAATCTGTGTAAACAGTATCCCTCAAGGCAAAAACCTATCAAATGCAAAAGGGAGCTCAGCAGGACACAGTCAGGATTCTTTGGCCTACGGTTGTGATTTTAAAAACAGGAGACAGTTAGGACTATTCACGTGAGCTGGAGATCAAAGGACGGAGCATCTGATACTGACTGGGCTGGAGAAACGGATAAAAGTGGAAAGTTGGTGGCAAGGTGGGATCTGCTCCTAAGAGAAGTTACTCTCTCTGGCTAAAGAGAATGGCATAAAGAAGACAAGGTCTGCTAAAAGATGCACGGAAAACCACCAATAAATAAAAATGTTAGCGCAAAGATTCACTAAACATGGACATGGAAATCCTAAGAGTGGTGCAGTGTGAATACCACAAGGGCAAGGCTCAGTAAGCATTGTGGAATCACACCTCATTCATTAACTTCCCAGAAGACACTGTATTCCTGC TCONS_00070363 r 5' 3869 TCONS_00070363 r 5' 3869 EMBV3_21748 CTGAGACAGAACCTCACGAAGGAAAGAGGAAAGTGGAATCTCTGTGGCCCATCTTCAGGA Gene GeneID:533977|BUD31:NM_001046364:254_cdna Constitutive 0 NULL GeneID:533977 25 GENE BUD31 MGC137430 BUD31 homolog (S. cerevisiae) EMBV3_28045 CCAACCGCCACGACTTCTTATACATTTGGGACACGAGCCAGAGTTTAAAAGGGAACCAAC Gene GeneID:507996|BRPF3:XM_002697205:91_cdna Constitutive 2 NULL GeneID:507996 23 GENE BRPF3 NULL bromodomain and PHD finger containing, 3 EMBV3_26491 CTAAGTGGTTTCTGTTGCTCTCTTTTCTTCTGCTCAAGCTGGTTGGTAGCTGGAATGCCA Gene GeneID:504963|DPT:NM_001045903:93_cdna Constitutive 2 NULL GeneID:504963 16 GENE DPT MGC138044 dermatopontin EMBV3_10394 CCGGTAAAGACAGAAGAAGCAGAACAGAGTGTGAGGTGTGAGCCAGCTGATGGGCTTGAA Gene BVV0102_243440 + 0 NULL GK000012.2:80608174-80711877 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041191 1 XLOC_024998 NonCoding TCONS_00041191 XLOC_024998 NonCoding NonCoding - 12:80690378-80691267 - TSS30692 889 2 TCONS_00041191_2 59 1 0 0 0 0 0 0 0 0 0.00055221804569112 0.000372762721438144 0 0 0 3.22754040627082e-06 0 0 0 0 0 0 0.000501540285863679 3.41477040778224e-06 8.34722135309952e-06 0 0 0 7.92516142394456e-06 0.00039544363847265 0 0 0 XR_227384.1 LOC101909800 PREDICTED: Bos taurus uncharacterized LOC101909800 (LOC101909800), 2e-109 399 100.00 0.247469066366704 0 noncoding 0 0 0 0 0.0092838025012654 0.949172464970789 0.0147902314667527 0.777778896180811 GGTCAGGAAGAGGCATCCTGCGTCTGGTGAGGGAGCCTGTTCAGAGCCCTCAACGGGGACAAGGACACAATGTGAGCAGACTTCTATTCGTTTTCAAGGTGATGGGCCCAAGGCCTAGGACCCCAGACAAATAAGGGGAGTGGGCTTGGAGGGTCCCATACCTGCCAGGGAAGGCCCACTGGAAGGAGGTGGGGAGCAAATGCAGGGCTCCCACTGTGAAGCCACGGCCTTGGACAGGGCGGGGTGCCTGTGACACGCGACCCGGTAAAGACAGAAGAAGCAGAACAGAGTGTGAGGTGTGAGCCAGCTGATGGGCTTGAAGCTGTCAGGACCTGGAGCAGGCAGAGAAGCCAGATCTGCCTATCTAGGAGAACTTTGCAGCCCAAGCATCCAGGTTTTCTACATCAGCTGCTTCACCCAAGTCACTGCCAGCTCATAAAGTGCTTGCCTGACTCACTGGCTTTTCTCCCTACAATGATGCTGTTTTATTAAATGTTGTTGAAGCTGGGGGAGGGCGGGGGAGGGGTCGCCGCAAGGTTGAGGGGAAGAAGCAGAGAGAGACAAGTCAGGGGTGAATTCCATGTTACTGTTATTTTCAAAAGGAGTCTTTCTCAGTTTTGCTTCCTTCAAGGCTGTCCCAAAATTCGGTTAGATGGGATGGGTAGGCCCTGATCATATACAAGGTTGTGTTTAAATGTGCTGGAACTCTGTGTCTGTTTGTGTATAGTCTTGAAGGATCAAACATATATTTAACCCGCATAAGTGTTCCTTATATCAGAGCAGAAACATGGCCAACAGGTTCTAAGGAGAGCTGGTGTTTACAGTGTTTGGAGATATGTGTGAGAAGATCGTGTTTTGCTTTATGCATACATATTTGCTTTGTCTGGTA TCONS_00037416 . 3' 20611 TCONS_00037416 . 3' 21499 EMBV3_30625 TGGCCATCCATGACAAAGCTGGTTCCAAACAAAACGCCATGACAGACGTGACAACTGAGG Gene GeneID:100138461|LOC100138461:XM_002683988:2_cdna Constitutive 0 NULL GeneID:100138461 Un GENE LOC100138461 NULL similar to MGC128518 protein EMBV3_05722 CCGTTTTAACCGTCTAAGCACCCCAACACATACCTGATGTGCCTCAGATTCTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_01320 TTTGAAGATAAATTCAGGCCAGACATGGAGGTTTGGCCGGTACAGGTGTGAGAAAGGGAC Variant GeneID:511207|PSMB7:NM_001038527:17_cdna 577^728 2 EMBV3_00222 GeneID:511207 11 GENE PSMB7 MGC133789 proteasome (prosome, macropain) subunit, beta type, 7 EMBV3_40902 TGGACTATCCAGATGCCACCAGAGTACCATGTTAGGGTGTCTATCCAATATCTCCAACTC Gene GeneID:282373|SPADH1:NM_174616:2_cdna Constitutive 0 NULL GeneID:282373 26 GENE SPADH1 MGC134441 spermadhesin 1 EMBV3_08675 TCCCGCCTGCGAGGCCTGGAGTGAAGAAGAGGGAACCGGAGAGGAAGCAAAAGAAGAAAA Gene GeneID:615883|SLIT3:XM_002696242:30_cdna Constitutive 0 NULL GeneID:615883 20 GENE SLIT3 NULL slit homolog 3 (Drosophila) EMBV3_15139 TCTTCAAACTGTGGGGCTTTGGAGTGGGCTCTCTGTCTAACTGGTCGTGTCACCGAAGAA Gene GeneID:100337381|LOC100337381:XM_002683942:5_cdna Constitutive 0 NULL GeneID:100337381 Un GENE LOC100337381 NULL Sh3 domain YSC-like 1-like EMBV3_43696 CAGTCTGCTATGAGGACATGGGTGCCAATACAACGAAATGGCGAATGGTGATGAGGGTCC Gene GeneID:782719|IL8RB:NM_001101285:139_cdna Constitutive 0 NULL GeneID:782719 2 GENE IL8RB CXCR2 interleukin 8 receptor, beta EMBV3_16580 TAAAACAAGCCTATGTAGTTCTTAAGGAGGAAGCAAAAATTTGACCAGCTGTCATTCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30135 CTCTCAGTTGTTACTGCTTGGGCCTCCCAGCCTGCTCATCTTCCTCTTGGGTTGTGTCCT Gene BVT0102_010435 + 1 EMBV3_40069 GK000003.2:54609396-54643138 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12493 AGAGCACTCTGACAGCAGATCTTGGGGCCTTCCTGAAATCTCCCTCCTCCACCCAGCACA Gene BVV0102_391247 - 1 EMBV3_27816 GK000027.2:4793817-4812448 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18642 TGCCTGCACCAAGACCTTCTCCGCCTAGCCTGCTCAGACATTCGATTCAATAGCTACTAC Gene GeneID:781634|LOC781634:XM_002707851:129_cdna Constitutive 0 NULL GeneID:781634 15 GENE LOC781634 NULL similar to olfactory receptor, family 51, subfamily V, member 1 (predicted) EMBV3_17947 GATGAAAGTGTCCATGCTCTCTTTGCTGCAGTGGTGGAGCAGATTCACAAGTTTGCCCAG Gene GeneID:534815|PIK3C3:NM_001099067:100_cdna Constitutive 0 NULL GeneID:534815 24 GENE PIK3C3 MGC139319 phosphoinositide-3-kinase, class 3 EMBV3_43656 CCAGTACTATACAGTCCACAGGGTCCCAAAGTGTCAGACATGTCTGACTTTCACTTTCAT Gene BVV0102_102389 - 1 EMBV3_40575 GK000009.2:42417662-42435612 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29249 AGGTGGACCTGACCATTTCCGTCTCCCAGATCTCCATCGAAGAGAAGCTCAAGGTCCTGA Gene GeneID:505258|GYG2:XM_002700434:17_cdna Constitutive 0 NULL GeneID:505258 X GENE GYG2 NULL glycogenin 2 EMBV3_17351 CTGGAGCCCAAGGACTGATAACCTCTGTGATACCACCTGACTGTCTCAACATCAGCCAGT Gene BVV0102_252189 + 0 NULL GK000012.2:16456994-16509828 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038368 1 XLOC_022193 NonCoding TCONS_00038368 XLOC_022193 NonCoding NonCoding - 12:16471397-16472318 - TSS27869 921 3 TCONS_00038368_4 68 0.626492942453855 1 0 1.47727442782177e-05 0 0.000130621005135666 0.00125328668128557 1.60819807190264e-05 3.10710837870964e-05 0 0 8.56691466746841e-06 0 8.28513365615201e-07 0 0 0 0.000159811334249846 0 0 0 0 0 3.29612192557811e-06 0 0 1.82026523121559e-05 0.000225683282648512 0 7.06858275124506e-07 0 0 0 XM_005225965.1 CYP4V2 PREDICTED: Bos taurus cytochrome P450, family 4, subfamily V, polypeptide 2 (CYP4V2), transcript variant X1, mRNA. 2e-46 190 86.06 0.178067318132465 0 noncoding 0 0 0 0 0.0584876950080403 0.709683840924933 -0.0033075914905888 0.946561089153941 GTGCACGGCCAATTCTCTGATTGGCTGATGTTGAGACAGTCAGGTGGTATCACAGAGGTTATCAGTCCTTGGGCTCCAGGAGGCCTGAGGCTGTGTGCTCATGGTCAGCAAGTACTTCCTCCATCTGAGGGGGCAGGTGGTTCCCATCTGCAAAACAGCTCAGGAAATGTCCATCAGATACTATTATCTAGGTACTCCAGATAGGGGCTAAAGCAGAGGGTATGGCGGCGGGGGCCGTGGTGGTCTGTCCTGGGAAGGCCCCATAGGGTTCTTGTTGTTCAGTCTCTAAGCCCTGTCCAACTTTTCGCAACCCCATGAACTGCAGCACGCCATGCTTCCCTGTCCTTCACTTCCTACCGGAGTTTTTGTTCAGATTCACGTCCACTGAGTCGGTGATGCCATCCAACCATAGGGTCCTGCTTGGTTATAATCATGTGATGATGATAATGAGGAAGAGGGTATAACGATGATGAGCTTCCATTCCCTTTTCTCTCAATAGAATTGTCTTCCTATGATGAGACTTCAGGAGGATTAAGGAGGTAATCTGCTGCAATGCAGGACACCTGGGTTCCATCCATGGGTTGGGAAGATTCCCTGGAGAAGGGAATGGCCACCCACTCTAGTGTTCTTGCCTGGAGAACTCCATGGACAGAGGAGCCTGGCCAGGGTACAGCCCATGGGTTCGCAAAGAGTCGGACACCACTGAGCAACTATGCTTGCACTGAAGGAGGTCAGGTAACATGCTTAAGCTCATTTTGACAACCAACAATTACAACGTAAGTCAAACCCTTTCTTGGCATTTCTTGAGTGTGGTCAAAGGTGATCCCTCTCATAACTCTACCCCACCCCCACTTCATTGAATTCCTTTCCCCCTCCCCTCTAACTCATTATACCCAGAATCTACACCCAAGCATCCCCCTT TCONS_00036306 . 5' 11503 TCONS_00036306 . 5' 11503 EMBV3_00292 AAGGTCAGTTTGCCTCTCGGGACACATTTGGCACTGTCTGGAGGTGTTTGGTCGTCATGA Gene BVV0102_267772 - 1 EMBV3_36657 GK000026.2:22960684-22961815 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151906 TCONS_00151907 1 XLOC_092215 Coding TCONS_00151906 XLOC_092215 Coding Coding ACTR1A 26:22960812-22978156 j TSS113434 3849 1 TCONS_00151906_3 329 0.0911925175370226 10 0.778642680043822 1.34734694896325e-05 4.99714603763446e-05 3.58184750482624e-05 4.7338315383112e-09 1.43564443725085e-05 7.81210595670822e-10 4.15293328719715e-05 3.98958932245751e-12 7.62509719017998e-07 4.2803586069652e-06 2.26283688290009e-33 6.27612545350919e-24 8.82452904430087e-10 4.96931553659638e-11 1.74602110905022e-22 0.000192263001376102 1.02242133307077e-41 4.22094863979146e-05 2.26052312626285e-05 1.44814847192696e-05 2.14395550026928e-37 5.27280856650131e-05 9.41123076867253e-06 7.33631942754045e-06 9.00287083447648e-08 0.000667152502441584 7.50979770075756e-06 1.9895959884213e-05 7.38215786675681e-48 1.07987736080902e-68 NM_001193248.1 ACTR1A Bos taurus ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) (ACTR1A), mRNA. 0.0 4892 99.93 0.706157443491816 NM_005736.3 ACTR1A Homo sapiens ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) (ACTR1A), mRNA. 0.0 2711 82.34 0.706157443491816 TCONS_00151906_3 sp|P61163|ACTZ_HUMAN ACTZ_HUMAN Alpha-centractin; 0.0 676 100.00 0.996960486322188 1 coding 0 0 0 0 -0.206807096202638 0.13937221009932 0.0198660801771908 0.79617460419773 AGACTGCGCATGCGTGTCAGTGGCGTTAGCAGCGGACCGGGCTGGCAGTTCCTTCCTCGGAAGGAGAGGTTCTTCTGCCATGGAGTCCTACGATGTAATCGCCAACCAGCCTGTCGTGATCGACAACTGTGGGCAGACCCAAGCACGTTCGTGTCATGGCAGGCGCCCTCGAAGGTGACATCTTCATTGGCCCCAAAGCCGAGGAGCACCGAGGGCTGCTCTCCATCCGCTACCCCATGGAGCACGGCATCGTCAAGGACTGGAATGACATGGAGCGCATCTGGCAGTACGTCTACTCTAAGGACCAGCTGCAGACTTTCTCAGAGGAGCATCCTGTGCTCCTGACAGAGGCGCCTTTAAATCCACGGAAAAACCGGGAACGAGCTGCTGAAGTTTTCTTCGAGACCTTCAACGTGCCAGCCCTTTTCATCTCCATGCAAGCTGTGCTCAGTCTTTATGCCACCGGCAGGACCACGGGTGTGGTGCTGGATTCTGGGGATGGCGTCACCCATGCCGTGCCCATTTACGAGGGCTTTGCCATGCCCCACTCCATCATGCGCATCGACATCGCTGGCCGAGACGTCTCTCGCTTTCTTCGCCTCTACCTGCGCAAGGAGGGCTATGATTTCCACTCATCCTCCGAGTTTGAGATTGTCAAGGCCATAAAAGAAAGAGCCTGCTACCTGTCCATAAACCCCCAGAAGGATGAGACACTAGAGACGGAGAAGGCGCAATACTACCTGCCCGACGGCAGCACCATTGAGATTGGTCCTTCCCGATTCCGAGCACCTGAGCTGCTGTTCAGGCCGGACCTGATCGGCGAGGAGAGCGAGGGCATCCACGAGGTGCTGGTGTTTGCCATCCAGAAGTCTGACATGGACCTGCGGCGCACGCTGTTCTCCAACATCGTCCTCTCGGGTGGCTCCACCCTCTTCAAAGGTTTTGGTGACAGGCTATTGAGTGAAGTGAAGAAATTGGCTCCGAAAGACGTGAAGATCAGGATATCTGCACCGCAGGAGAGACTGTATTCCACATGGATTGGGGGCTCCATCCTCGCCTCCCTGGACACCTTTAAGAAGATGTGGGTCTCTAAGAAGGAATATGAGGAAGATGGTGCCCGGTCCATCCACAGGAAAACCTTCTAATATTGGGACATCGTCTTCACCTCTCTCTGAAGTTAACTCCACTTTAAAACTCGCTTTCTTGAGTCGGAGTGTTTGCGAGGAACTGCCTGTGTGTATGAATGTGTGTGTGTGGGTATGAATGTGTGCACATATGCGAGTGCCGTGTGGCCCAGGGATCCCAGGATTTCAGGGTCCGGAAAGGACGATGAACTACCCATAATGGCGACGGCCTGAGACCTGGGGTTGACCACTAACTGGCCCCTGACAGGGAAGAGTGCTGGCAGAGGGCCCTGCTCTGTCAGCCGGGCCTTTGTCTGGCTGTGTGGGACTATGTTTACTACCACAGGGAGACAGAGAGGGAGGTAAACCAACCCCGGGGACACTTGCTGCTGCCCATCCTAGGCTGGGCTGGCCCCACCCCCGAAGGAGGCCCTGTGGCCTCCCCTTGTTCATCATTCTGCTCTCGATGCCTCTTGATCGTGGACTGAGGCTTGAGTCCAGGGTTGAGTTCTTGTCTGGTCTTGTTGCAGTTTGGGTTTAGAAAGCTGGAGAAACACTCCAGGAGCTGTTATTGAGACTTCCCTGTCAGGAGCGGGCAGGATGCCCTCAACTTCACCTGGGGACCAGGACCACACTGGGCATTTGAGGAGGGCATGGAGTGCTACTTCTGATCAGTGGCAGGCTTACCGCTCCAACCCCCAGCGCCATCCAGGGATCTCTGGAGAGTTTCAGGAGCCTGTTGGCCTCAGGTCCTGTTAACTTGCTTTCCATCCATCCATGGGCAGTGCCATCTTCAGTTTTATTTATTGAAGTGTTTGTTCAGTTAGGGGACTGGAGAGAGGGAGCTCACTGCCCCATCCACCAGTCACCCTGTTCACACTAATGTTTACAGCGCCTAAGCTTAGCATAGCGTTCAGGGCCCTGCCACTCCCTGCCAACATGAACTGACAGTATCCATAGGCCTCAGGACCATTTGGGATCAGAGGCTACATTCAAAGTCACTCTGGCCTCTTTCTTTCTCCCTCTTCCACTTGCTCACTGCCCTGGAATCAACAGGCTGGTTGCTGGTTGGATTTTTCTGAAATAGGAGGTAGAATCACCATTTGGCAAAGGCTCCCGGCAAAGGAGGGGTGTTGGGGATGCCGCCTCCTTAGGACTGGAGAAAGAGCCACAGTTAACCAAGCTGCCTTTTCCCATGCTAGCTGACCCCAGGGGACTAGCTTGTAGAGGCCAGACAGCCCCCTCTGGCTGACTTGTGCTATTCTTGTCTTTGGACTTGTTTGGTCAGGGAAGGAGGGGCCAGACCAGGCTGCCTGGAACTGATGGGCTCAGGCTCACTTCCTCTGGTCCAGTGGGGCCAGGCGCCTACCCTGGACTGGGCTGGCCTGGCAGGGGTCCAAAGGCTCTTCAGCCCAGAAGTGCAAAGCTGGGGCTAGCAGATATTCACCGGCACCCTCACCCATGACACCAACACTTGCCCGATCCCAGATTCCAGGCAGTATTCTCGACCCCATGCCGTCCAACGACCAAAGGCCCTGCCAGGTGTGGGCCGCAGCAGCAGGTGTGTGTGAAAGCGATGTGGCGACCCGCGGACTGCAGTGTGCTTAACCAGCTCACCTCCCTCCTCTTAGCCCAAGCCTGTCCCCTGCACAGCCTCGCACAAACCATGTTGCCTGGTGGGGCCCAGTGTACTTAAATAAACTCGTTCTAATAGACACATCAGCTGGGCCTCTGTCTGCAGTCAGTGCAGGGTGGGAGGGACGAGCTGTGGGCCCTGAGACTGGGCCTAGTCTGTCCTCTAGAGGGCATGTTGCGCCCGCCAGACTTGGCCAGACCTTCACCCAAGTCCCAGCCTGTCAGGTGTATGCAAAGAGGCTGTTGACAAAGAAGCCCAGAGACCAGGCCAGGAACTTAGAGTCCATGCCCTGTGCCCAAGCCCATGGATGAGATTCCACCCACAATGAGAGGTCAGCTCTTCATATCTCTGAAGTCAGGAGCTTATTAAAACACAGTTCCTGGGGTCTATGCTCAGATATTCTGATTAATCACTTCTCCATTTTAAACCTGTATACTTGAACAGTTAGGGGTGGGAATTGCTAGGCACTTTACAAGTGTTAACCATTTGATTCTCGCAACAACTAAAATGCAAGTATGTTTGTTACTCACTTTACAGATGACGAAATAGAGCCACAGAGAGATTATGTAATTTCTCCCAAATCTGCCCTTTGTTAGCTAGAATTTGAACCCAGGCAATATAGCACTAGACTACATTCTTAACTGTGATGCAGACCTTCAGATAACCATTGGTCTAGGGCAGTGGTTCCCAATTAAGGTCAGTTTGCCTCTCGGGACACATTTGGCACTGTCTGGAGGTGTTTGGTCGTCATGACTGGGGAGAGATGCAACTGACATCTAGTAGGCAGAGGCCATCCACAATAAAGAACTCCCCAGCCCCAAATGTCTATAGAGCCCAGACAGAAACGCCGGCCTAAAGCCGAGGTTTCTAGTCCCAGTCTCACGGTAAATAAAAAAAAATTTTTAAGTCATCTTTGGAAGATCCCTGTGACTCCAAGGATCTCTAGCCTAGAAGTGGCCACTCCTTGCCCACCACCTCCAGCAGTGGTACATGGGAAACGCAATGGGGCTATGACCACAGGCCTGAAAGCTGTTTGGCTCCCAGGGGCCCATGAGGCTACGGTCTGCAGGCTCTCCCCCCTACCTCAGT EMBV3_00146 CAGTTCCCGAGTTGAACGACTACCACATCACGCCACGGTGCTTGCTCAGGAGAAGGCATA Gene GeneID:535200|WIZ:XM_002688559:212_cdna Constitutive 0 NULL GeneID:535200 7 GENE WIZ NULL widely interspaced zinc finger motifs EMBV3_34904 TCTTTGACTGCTTTGATGACATAGGGATCTGTCAAGTTCACATGGTAGTGAAAGAAAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37395 GAGAAAAAGATGCATTCTACAGTTACGGAGCTACAGCCACTCCAAGTGCAAGAGAGCTGA Variant GeneID:514213|OBFC1:NM_001076849:129_cdna 397^465 2 EMBV3_32247 GeneID:514213 26 GENE OBFC1 MGC143179 oligonucleotide/oligosaccharide-binding fold containing 1 EMBV3_38392 CTGGCCACCTCAGCCATAGCCATCTTCCTGGTCTTAGTGTGTGCCTGTATCCTTCGATTT Gene GeneID:512135|TMEM179B:XM_002699296:244_cdna Constitutive 0 NULL GeneID:512135 29 GENE TMEM179B NULL transmembrane protein 179B EMBV3_29608 CTGGTCAATGCAGTTCTCAGCCGCTTGGACGTCACTCTGGTACATTCCATTGTCAACGCA Gene GeneID:281989|PLUNC:NM_174426:733_cdna Constitutive 0 NULL GeneID:281989 13 GENE PLUNC MGC140393 palate, lung and nasal epithelium associated EMBV3_31641 CTGTTGGTCTGGTTTACTGGGAAATAGCCCGGAGGTGTTCAGTTGGAGGAATTGTTGAGG Gene GeneID:536380|ACVR1C:XM_002685380:310_cdna Constitutive 0 NULL GeneID:536380 2 GENE ACVR1C NULL activin A receptor, type IC EMBV3_01545 ACTTCCCCAAAGTCACATAGTTGTAGTTGGTAGAAGAGAAATTGAAGCTCATTCAGTCTG Gene BVT0102_413161 + 0 NULL GK000006.2:60896790-60971041 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208911 1 XLOC_127423 NonCoding TCONS_00208911 XLOC_127423 NonCoding NonCoding - 6:60925203-60926056 - TSS156418 853 2 TCONS_00208911_2 67 0.463071512309496 1 0 1.59503976840356e-05 0 3.25462711365261e-05 2.9205682029736e-05 0.000115760293208589 0.000125804865785477 6.83670347893168e-06 0 0 0 0 0 0 0 0 0 0 0 5.88469527374323e-05 0 0 0 0 0 6.4979813950421e-05 2.47789856139901e-05 0 0.000236469366692555 0 0 0 noncoding 0 0 0 0 GTATTTTAAGTTACTTCCCCAAAGTCACATAGTTGTAGTTGGTAGAAGAGAAATTGAAGCTCATTCAGTCTGATTCTAGAATCTATACTGTTAATCACTACACATTCCTGCTTTAGGGATTAATTATTGTTTCAGTCCAGGTGATTGTAGGAGTTATCCTGACCCCTAGGTCCCAGATTGAATTGAATCATCTCTCCATTCCATACCCTGTGTGATGTCCAGGCCCTCCCCGAGATGCTGGGAATTCAGGTGGGCTTGCACTGTCATGGCGATCTGGCTTGGAGCTCCTGCTTCTGTGGAATTCTTCTGGTCCCTGGGCCATCGTGCATGTGTTCTCTTCCTTGTCCGCATTCTGTCAGCCCAACTACGGGACCCAGATACTTTCCCTAATTTCTTCCAAGCCTCTTACACATTGTAACATATTTTGCCAAAGGTCAAAAGATGGAGGTTTTGTAGCACATAAAAATGCAGATTTAAAGAAACTGAATAATAGCTAGCTCCATTTTTCGAAAGTCCCCTAATGATTTTGCCATCGTATTAGTTAAGACTTAGGCTAAGCTGCTGAAACGAGATCCTTCCCCCACAAGCCCTGCTGACTCTCCCGCCAAAAAACACTCCGCTTTCTCTCTCCCTCCAAGTCTAGGCTGTGTCTGCTTTGCTTCCCACTGTGGTTGGAAGAAGGAACTTCTAACCACAGTCCCTTCTGTCTTGTTGCTTTGGCATCCCCTGGGAGTGACTCTATCCTCTTCTGTATAGACAAAGCCAGGTCAGACCACAGCTACAAACAGCCCATGGGAGACAGAAGAGGAGGGAACGGAAGCCAAGGATTTCCTCCAGAGCAAGTAGATGCTCA TCONS_00203303 . 3' 28415 TCONS_00203303 . 3' 29267 EMBV3_23716 CCATCCCAGGTTACAGTGCTTGAAAACAAAGTCAAAAGTCTGGCACAGAAAATTACTCAC Gene BVT0102_144106 + 0 NULL GK000006.2:47429158-47468308 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208360 1 XLOC_126873 NonCoding TCONS_00208360 XLOC_126873 NonCoding NonCoding - 6:47432658-47433259 - TSS155867 601 1 TCONS_00208360_2 65 1 0 6.79151722403665e-05 0 0 1.38172240397526e-05 0 0 8.73300406409103e-05 0 0.000551390692466631 5.47686702354519e-05 0 0.000142789532607289 0 0 8.97971339654139e-05 0.00171389700688245 0.00229282651628683 0.000667979142142468 0 0.000179486619135746 2.02045064116906e-05 0.00140346492860854 0.000503733581787419 0.00122736236449512 0 0 0 0.000191783760337075 0.000145395967821489 0.000190071557550026 XM_005207809.1 RBPJ PREDICTED: Bos taurus recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant X1, mRNA. 0.0 930 100.00 0.855241264559068 NM_203284.2 RBPJ Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 4, mRNA. 0.0 874 93.62 0.958402662229617 0 noncoding 0 0 0 0 -0.169670629314524 0.359685178569758 0.00848773558662244 0.891416555127055 AAATGTTATTCAATTATTAACTAAGTTACTTACTTTTGATTTCAAAAGCAGCTGTGTTTCTGATGAATACTGAACAAATGTGTGTAATTTTCTGTGCCAGACTTTTGACTTTGTTTTCAAGCACTGTAACCTGGGATGGATGGTTAGAAACAATAATATATTAGGGTTTCTATTTAACCCTTTCAGGACTGAACTGTATTTCCTTTTATTAATTTTTCCCTGTGTTGTGATAAATGTTTGCCAGCATTCAGTACTGTGTTGGTCCAGATGTAGGTTTATGCTCATTTTTAGCTTATTTCTTGTACCTTGCAGCATGCTCTACGCATTCAGTCCTTAAGGGGTTTATTTTACAAACTGTGCGCCTGTAAGGTTTATTAGCAATAAGATAGAAAATTGAGCAAGTTTATACCATAATTTTGTAGAAAAAAGAATCTGCTCAGTTCCATATTTCATCCATGAGAAACCTGCAATATGGGCAGTTTCAAGAAATAAATAAAAAGGAAATGTAAACCATTGTAAAAGTGTTCTGTTGGACGTGCCTGATACATGTATTATCATCATTGATTTCAGAATACTTAAAAGTTTGTTTATAGTTTTACCT TCONS_00203124 TCONS_00203125 TCONS_00203126 TCONS_00203128 TCONS_00203129 . 3' 276 TCONS_00203124 TCONS_00203125 TCONS_00203126 TCONS_00203128 TCONS_00203129 . 3' 876 EMBV3_18802 CACGTGATTACAGCACTCCTTGTGAAGAAGGAATAGTGCTTGGAGCGGCTGTTGAGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13647 AGACCATCTTTGCTAAAGTAGACAGGTTGGCAGGAATTATCAACTTCCAGAGACCCAAGG Gene GeneID:538204|PSMD12:NM_001046428:120_cdna Constitutive 0 NULL GeneID:538204 19 GENE PSMD12 MGC129114 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 EMBV3_08939 CAGCTGGAGGAGAAGGAGAACAAGAAGTTCCCAGTGTTCAAGGCTCTGGAGTTCAAAAGC Gene GeneID:512805|CSTB:NM_001037461:36_cdna Constitutive 0 NULL GeneID:512805 1 GENE CSTB MGC134609 cystatin B (stefin B) EMBV3_12232 GAAGCGAACCATTAATAAAGCCTGGGTGGAATCAAGAGAGAAGCAAGCCAAAGGAGATAC Gene GeneID:618428|CACYBP:NM_001034809:225_cdna Constitutive 0 NULL GeneID:618428 16 GENE CACYBP MGC127208 calcyclin binding protein EMBV3_23725 CTGTTAAGCCAGCCTCATTAGTGGCACGGGACTATGAGAGCCTGATTGATTTAACATCTG Gene GeneID:539898|ZBED5:NM_001099388:193_cdna Constitutive 0 NULL GeneID:539898 15 GENE ZBED5 NULL zinc finger, BED-type containing 5 EMBV3_36524 TTGCCAGGGAACATCGTGTCTGCTCTCCTGATGGACAGAATTGGGCGCTTAACGATGCTA Gene GeneID:538430|SV2C:XM_002690415:98_cdna Constitutive 0 NULL GeneID:538430 10 GENE SV2C NULL synaptic vesicle glycoprotein 2C EMBV3_22525 ATCTTCCCCTCTGCAGGGATCAAACCAGCATCACTTGCATCGCAGGCAGATTCTTTACCA Gene BVT0101_046935 + 1 EMBV3_38912 GK000008.2:10632192-10662267 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33605 ACCTCCAGGGTGATGGTTTTGCCGGTCAAGGTCTTCACGAAGATCTGCATCCCACCTCTG Gene GeneID:100138493|LOC100138493:XM_002694564:601_cdna Constitutive 0 NULL GeneID:100138493 17 GENE LOC100138493 NULL hypothetical protein LOC100138493 EMBV3_33989 AGTAACGATTATGCAAATTAAACCCAGAAGCTTATTTCAGTTTTGAAAAATTTGCCTGAA Variant GeneID:286855|MTFMT:NM_001166523:53_cdna 566^668 2 EMBV3_17707 GeneID:286855 10 GENE MTFMT NULL mitochondrial methionyl-tRNA formyltransferase EMBV3_23369 TTCCCTACACCCAAAGCCTCCCCATTAAGGCCCAATCAAAAAGCCCAGCTGATTGCTGAA Gene GeneID:509555|LOC509555:XM_002695816:170_cdna Constitutive 0 NULL GeneID:509555 19 GENE LOC509555 NULL similar to Leucine-rich repeat-containing protein C17orf76 EMBV3_02566 CCCCAGTCAGGCCGATCCGCTCCGCTCACGGGTTATGTAACGAACTCATCACGAGTTGTT Variant GeneID:617261|ZNF280D:XM_002690858:232_cdna 138^631 4 EMBV3_29690 GeneID:617261 10 GENE ZNF280D NULL zinc finger protein 280D EMBV3_15030 ACCTCAACGCCCCCGATCTCTATATCCCCATGCTGGCCCTGCTCCTGGGCATCTACCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17025 GCAATAGCACTCCTAGGCATTATCCTAGAGAATTGACATGTTCACACAAAAGCTGTACGC Gene BVV0102_367949 + 0 NULL GK000003.2:39721770-39885181 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37163 TGCAATAAGGGCATTAACATCATTAAGGGTGCCTCCCCTGAGTGGCTCCTGCTGCATGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26706 TGATTGGATGCTAACTTCCCTGAAATCAGTGGTTCCACATTCACCACAGGGATACAAGCC Gene GeneID:281092|CROT:NM_177494:5_cdna Constitutive 1 NULL GeneID:281092 4 GENE CROT MGC134514 carnitine O-octanoyltransferase EMBV3_41606 TTCCTGCGCATGTCCCATGGCTGAGCTGTCCTCAGTTTTCCTGAGACCATGTTTCCTGAT Gene BVV0102_102315 + 0 NULL GK000019.2:42950373-42960223 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097072 TCONS_00097069 TCONS_00097070 TCONS_00097071 1 XLOC_058165 Coding TCONS_00097072 XLOC_058165 Coding Coding STAT5B 19:42957555-43023015 j TSS72017 5363 1 TCONS_00097072_5 787 0.0134253216483312 19 0.918361111535465 0.00249708683791677 0.00229167825404019 0.000957987486090528 0.000640142704871636 0.00146866205056887 0.000281717217407667 0.00015919096130964 0.000677739762204636 0.000855453282841881 3.36595174395531e-05 6.91199502508026e-17 5.24518827841798e-14 0.000124895029279572 1.41675964373257e-09 4.35218371731682e-29 4.1011631301597e-15 3.70900668970235e-22 2.85242555534465e-08 0.00153578198955481 0.00209975309397871 0.000512758755916455 0.000448531326370654 0.000310095167484924 1.39673698166561e-31 0.000265240665659055 0.00104573273101574 0.000339082312391489 0.000194768246904144 6.10329979987666e-05 1.39095666877825e-08 XM_005220675.1 STAT5B PREDICTED: Bos taurus signal transducer and activator of transcription 5B (STAT5B), transcript variant X3, mRNA. 0.0 8918 99.44 0.932873391758344 NM_012448.3 STAT5B Homo sapiens signal transducer and activator of transcription 5B (STAT5B), mRNA. 0.0 4639 84.24 0.788737646839456 TCONS_00097072_5 sp|Q9TUM3|STA5B_BOVIN STA5B_BOVIN Signal transducer and activator of transcription 5B; 0.0 1635 99.75 0.998729351969504 4 coding 0 0 0 0 -0.10439138965168 0.508049636226752 -0.0280449357384287 0.695269738906922 GCGCGCGCCCCCGTGGGCCCCGGCGAGAGGAGAATCGTCGGCTGGAGCCGTCACCCCGGGCGGGACCGAGCGCAGGCGAAAACGCGCGGCGGCCCGGCCGAGGGAGGGAGCGAGCGAGCGAGCGAGCGGGCGGGCGAGCCGGAGAGCGGGTAGGAGGCAGCCGCTGGCGCCCGAGGGGCCGAGCGAGATTGTAAACCATGGCTGTGTGGATACAAGCCCAGCAGCTCCAAGGCGATGCCCTTCATCAGATGCAAGCGCTGTACGGCCAGCATTTCCCCATTGAGGTGCGCCATTACTTATCCCAGTGGATTGAAGGCCAAGCTTGGGACTCAATAGATCTTGATAATCCACAGGAGAACATTAAGGCCACCCAGCTCCTGGAGGGCCTGGTGCAGGAGTTGCAGAAGAAGGCAGAGCACCAAGTGGGGGAAGACGGGTTCCTACTGAAGATCAAGCTGGGGCACTACGCCACACAGCTCCAGAACACATATGACCGCTGCCCCATGGAGCTGGTGCGCTGCATCCGCCATATTCTGTACAATGAACAGAGGCTGGTCCGAGAAGCCAACAATGGTACTTCTCCGGCTGGAAGTCTCGCCGATGCCATGTCCCAGAAACACCTTCAAATCAACCAGACATTTGAGGAGCTGCGACTGGTCACACAAGACACAGAGAATGAGCTGAAGAAGCTGCAGCAGACTCAAGAGTACTTTATCATCCAGTATCAGGAGAGCCTGAGGATCCAGGCTCAGTTTGCCCAGCTGGCCCAGCTGAACCCCCAGGAGCGACTGAGCCGGGAGACGGCCCTCCAGCAGAAGCAGGTGTCCCTGGAGGCCTGGCTGCAGCGCGAGGCCCAGACGCTGCAGCAGTACCGCGTGGAGCTGGCCGAGAAGCACCAGAAGACCCTGCAGCTGCTGCGGAAGCAGCAGACCATCATCCTGGATGACGAGCTGATCCAGTGGAAGCGGCGGCAGCAGCTGGCGGGGAACGGAGGGCCCCCCGAGGGCAGCCTGGATGTGCTACAGTCCTGGTGTGAGAAGTTGGCGGAGATCATCTGGCAGAACCGGCAGCAGATCCGCAGAGCCGAGCACCTCTGCCAGCAGCTGCCCATCCCCGGCCCCGTGGAGGAGATGCTGGCTGAGGTCAACGCCACCATCACTGACATCATCTCAGCCCTGGTGACCAGCACCTTCATCATCGAGAAGCAGCCCCCTCAGGTCCTGAAGACCCAGACCAAGTTCGCGGCCACCGTGCGCCTGCTGGTGGGCGGGAAGCTGAACGTGCACATGAACCCCCCCCAGGTGAAGGCCACCATCATCAGCGAGCAGCAGGCCAAGTCACTGCTCAAGAACGAGAACACCCGCAATGATTACAGTGGGGAGATCCTGAACAACTGCTGTGTAATGGAGTACCACCAGGCCACAGGCACCCTGAGCGCCCACTTCCGGAACATGTCCCTGAAACGAATTAAGAGATCTGACCGGCGTGGAGCAGAGTCGGTGACAGAAGAAAAATTTACCATCCTGTTTGAATCACAGTTCAGTGTTGGCGGAAATGAGCTGGTGTTTCAAGTCAAGACCCTGTCTCTCCCAGTGGTGGTGATTGTTCACGGCAGCCAGGATAACAATGCGACGGCCACCGTTCTCTGGGACAACGCTTTTGCAGAGCCTGGCAGGGTGCCGTTTGCAGTGCCCGACAAAGTCCTGTGGCCGCAGCTGTGCGAGGCGCTCAACATGAAATTCAAGGCCGAGGTGCAGAGCAACCGGGGCCTGACCAAGGAGAACCTGGTGTTCCTGGCGCAGAAGCTGTTCAACAGCAGCAGCAGCCACCTCGAGGACTACAACGGCATGTCCGTGTCCTGGTCCCAGTTCAACCGGGAGAATTTACCCGGACGGAATTACACTTTCTGGCAGTGGTTTGATGGTGTTATGGAAGTGTTAAAGAAACATCTCAAGCCTCATTGGAATGACGGGGCTATCTTGGGTTTCGTGAACAAGCAACAGGCCCACGACCTGCTTATCAACAAGCCAGACGGGACCTTCCTGCTGAGGTTCAGTGACTCTGAAATCGGTGGCATCACCATTGCTTGGAAGTTTGATTCTCAGGAAAGAATGTTTTGGAATCTGATGCCTTTTACCACCAGAGATTTCTCCATCCGGTCCCTGGCCGACCGCTTGGGAGACCTGAGTTACCTTATCTACGTGTTTCCTGACCGGCCCAAAGATGAAGTGTACTCCAAGTATTACACCCCAGTTCCATGCGAGCCTGCCACTGCTAAAGCAGTGGACGGGTACGTGAAGCCACAGATCAAGCAGGTGGTCCCTGAGTTTGTGAGCGCCTCTGCAGACTCTGCCGGCGGCAGTGCCACCTACATGGACCAGGCTCCCTCCCCAGCCGTGTGCCCCCAGCCTCACTATAACATGTACCCACAGAACCCCGACCCCGTCCTTGACAACGATGGTGACTTCGATCTGGACGACACGATTGACGTGGCGCGGCGTGTGGAGGAGCTCCTAGGCCGACCCATGGACAGTCAGTGGATCCCCCACGCACAGTCGTGACGCCCCACCCCACCCCCCCTGCCCCGTCGCCATCTCTAGCTTCTTCATCCTTGCCAGAGGAGTTACTTTTGTGGATGTTTTAATTCCATGAATCGCTTCTCTTTGGAAACAATACTCATAATGTGAAGTGTTAATACTAGTTGTGACTTTAGTGTTTCTGTGCATGGTGGCACCAGTGAAGGATGTGTGAGTGTGTGAGTGTGAGATTGCACGTTGTGCTGCTTCTCCCCCTTGCTGTCCAGAGTTTAGCTGCAGAACTGGGGCCACAAACAGGCTCTGGTGGTTTTAACCTTGTGCAGAATGGCAGTTAGTTCCATGAACCCTGGAACTGGGCCATGTGTCTTGAGGTCCAGTGGCTCTGACACGTGGCTCTTCAAGTGAGGGAAGGACAGATGGAGGTGGAAACACCTCCCGTCTGGTGAATCTGTGTCACCGTGTTTGCCAAGCCATTGATCTATAACTGTGATGGTCTCTGCTTTTCTTCTGAAACGTAGAAACTGCCTTGTGATGAAGGAAGTCAATCCTCCGTCCTTCCCTCTCCCCCAACCCGCATTTTCCTGGGTCGGGATGGGAAAAGGAGGGACATACAGTAGTGGTTGGGGCAAGGGAAGTCGTGGCTTTGGCGGTGGGTAGTGGCTTTCTGAATAACTGGTAGCCCATCTTCTGTTCTCTGCCTCCCACGCTCACTCCCACGCCCCGTGGAATTGCCACTTAGTTCCTGTGTGTGTACACATGTGCAGACACGTTCGATGAAGTAGAGGAAAGACACGAGGGTCGCGTAACCAGCGCTCACAGTGTTCATGTCCTTTATGTCGTGGCCGGATTGAACGGCCCGGCCCTGGCTCACAGGCTCTGAGAATGTTGCATTGTTCCCTGGGAACGACCATCAGTCTGCCCGCCCTCCTCTGCGCTGGTGGAGGCGCAAGCAAGGTTTTCTAAAGGCATATTGATAACGGCTTTTTGCAAATGTTGAATTGTGTTTTTGTTTCTAAATTGGGACTTCTCGGTTTCCCCTTCTCACCCTAATTTGACGTTAGAATTCTTTCTTCCTGCATCAGGTCCTGTGCCTTTGACTCGCCGCAGGCCACATCTATTCCCTTCACTGTCCACACGGTGTCTTGGGGAGTGGGCGGCTAGAGTGTGGGCCTAACCCAGGACCTGTGTGTTGCCCACCTGGGCAGGGTGCTGGGTGTCAGCATTGGGGTAATTTGGGGAAACGCAGTCAGCAGGTTTTCTGGGAAGTTTGGTAAGCTGCAAAAACAAAGCAAAACAAAAAATCCTCAGCATAATTTCGTCCAAAATTTCTTCCATAGCTTTACACCAGAAGGAAGGAATGGGCTGTGGCAGGCAGGTGGGCAAAGGGGGAGGCAGGTATAGCTTTGGGGTTTAAGCCTTAAGGTCACCCCAGCTCCCCTCGAAAAGAAGGGCCTGACCACACCCAGGAGGGAATGGCCCTAAAAACATTATTTTTATACATGTGGGGAAATGAACATATTTTTTTTACAACATTAACTTCTGAACTTATCAGTGTTTTAATGTTAAAGGAAAATATTTCTCTGTAGTAAATATTTATTGGAAGATGACTTTTTAAAAGCTGCTCTTTGCCCTAGCTCAGTTTCGTACAGTGATTTATCACTATTTTTCTATGCCGGGCGGTAGACTGTCTCTGCCTCTGATGACCAGGCTGACCCCTCCACGGATACCAGCACTGACGTACCAGCCCCTTATGTCCTCAAGATTTGATTAAAATCCCCCCTCCCCCCCACCCCCTTCCCGAGACTGGGAGTGTTGGGGAAAGGTGGAAAGGAAGCCTAGTTGCCCCTGTCACCCGTGCACCTTGAGGGCCAACCCTAGTGGTCCTGGCAACCCCGGGGGCAGGGAGTGACACACTCAGATGAGTGGTTGGCCCGGCCCCTGGCATGCCAAGGGCAGAGCGCTCACTGCATAGTTAGCACTGGGCTGGGGAGAACAGGTGCCCAGGAGAGTGGCTGCCTGGAGCCTGGGGGTTCCTGCGCATGTCCCATGGCTGAGCTGTCCTCAGTTTTCCTGAGACCATGTTTCCTGATAGGAGAGATTGTGACTGAAAGGCACGCTCACTGTCTGCATATAGCTTCTCTCTCCTCTCTGTTCTGCAAACCACAAGGAGAGGCGACGGCAAGTCTCGACTGCCTCAGCCCCTCGCTTGCTCCCAGACACATATACACAAATCATCAAAACGTTTCAATGTACGGTGTGTTCAGGGCTTTGCAGTGGGTGAGGGGGGAGACTAAAAGTGAATATAACTTAAAATAGCATACTTTTTTATAATTTTTCTTTATAAAACTTTGTGAGATTATTTCAGATACATATTTTAGTCTTGATTGGCAGTAGTATATAACTGCCCAAAAAAAGTATTGTGTACAATTTGGAATAGTCATAAAATTGTGTATTTTATGTTACAAATAAAAATTTCCCTCAGTGGACAGTATGGAGTGCTCTTTTTATTTCATTCCACCAGGTGCTGAGATAGGGTGGTTTTGACGGGGAAATACTTGAAATCATCAGTGTGACTCTGAAAAAAGGAACTAGTTGGGCGTTGGCTGCCCCAGAGCTTGTGTGTGTCACCAGCGTTGATGGCTAGTGGGGGCGTTTCTTACCTTTCTGTTCACATGAGGTTTTGAAAATTAGAATGATAGTCTTTATCTCCTATTCCTGTTAGAAAGCTCATCCTTAAAAATCAGCGTGTTCAGGGGACTTCCCTGGTGACCCTGGGCTAAGACTCTGAGCTCCCAATGCAGGGCGCCGTGAGTTCAGTACCTGGTC EMBV3_17713 GGATCCACACACCACAGAAGAAGCACAGCTTTCTCAAGCACACTCCAGCACGTGGTACAT Gene GeneID:353254|KIR3DL1:NM_181451:2_cdna Constitutive 0 NULL GeneID:353254 X GENE KIR3DL1 NULL killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1 EMBV3_23723 GCTCTTGCCTTCTGTGCAGCTCTCAGTGGGAGGGCTTTGGGGCTATTCTATATGAAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05695 TTTGCTTGTGGATGGACTCTGCTGGGATTTGACCTCATCCTCATCTTCCTCTCCTACACC Gene GeneID:511570|LOC511570:XM_002693157:84_cdna Constitutive 0 NULL GeneID:511570 15 GENE LOC511570 NULL similar to olfactory receptor Olr190 EMBV3_37556 GGCGCATCATTCTGCCCAGCTACGACATGGAGTACCAGATTGTGTTCGAGGGAGTTATAG Gene GeneID:541004|NRP2:XM_002685532:107_cdna Constitutive 0 NULL GeneID:541004 2 GENE NRP2 NULL neuropilin 2 EMBV3_20828 TGTCACAGCATCAGAAAACCCACACTGCCACAAAAGCCGGCGATAAATATGTCAGGGAAA Gene GeneID:100140355|LOC100140355:XM_002697883:449_cdna Constitutive 0 NULL GeneID:100140355 25 GENE LOC100140355 NULL similar to zinc finger protein 597 EMBV3_00155 TGGCGGCTGATTCTGGACTGGGTGCCCTACATCAACGGCAAGTTCAAGAAGGATGACTAG Gene GeneID:281570|UQCR:NM_174215:261_cdna Constitutive 0 NULL GeneID:281570 7 GENE UQCR NULL ubiquinol-cytochrome c reductase (6.4kD) subunit EMBV3_28209 GCTCGGCTGGGCAGAGATACAGACCTGGGAGTATTCAGATGCATTTCCTTGTGGGTTGAT Gene BVT0102_095073 + 0 NULL GK000002.2:115488856-115790185 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18553 ATTGCGGTTGACAGGTATGTCACCATCTTCTATGCACTCCGCTACCACAGCATCATGACC Gene GeneID:505405|LOC505405:XM_002692426:408_cdna Constitutive 0 NULL GeneID:505405 13 GENE LOC505405 NULL similar to melanocortin 3 receptor EMBV3_36513 CATTCAGCCCTAAGGGTGCCACTTGTTGGCTAGGGACTGATGTGAAAGCTACATGGTAAC Gene BVV0102_090558 + 0 NULL GK000006.2:93628594-93633304 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205852 TCONS_00205853 1 XLOC_124761 Coding TCONS_00205852 XLOC_124761 Coding Coding CCNI 6:93628928-93672214 j TSS153622 3706 1 TCONS_00205852_3 377 8 0.914566246967772 6.74930715389993e-05 6.16302708634001e-05 2.96993897449721e-05 1.91409815942715e-05 7.06777747698431e-05 9.59486656729538e-06 4.2172463449366e-05 4.27134352713547e-05 8.90091217460476e-12 0.000267231176009714 7.8993738083325e-05 0.000303551321644615 8.18268807920561e-05 4.15573172195894e-05 4.51019054596849e-06 0.00118639253350535 0.000142983166851409 4.85180219229729e-08 1.79597946260462e-05 0.000387955714888093 1.53328409216599e-18 0.000535570039988471 0.000751633607902176 0.00105668882071908 0.000103207416002964 0.000122015016341313 1.20253091676978e-05 4.59509633061973e-09 0.000194318211767482 0.000442328468369024 XM_005208099.1 SEPT11 PREDICTED: Bos taurus septin 11 (SEPT11), transcript variant X2, 0.0 3443 100.00 0.514840798704803 NM_006835.2 CCNI Homo sapiens cyclin I (CCNI), mRNA. 0.0 2415 89.54 0.486508364813815 TCONS_00205852_3 sp|Q14094|CCNI_HUMAN CCNI_HUMAN Cyclin-I; 0.0 740 94.96 0.997347480106101 1 coding 0 0 0 0 -0.0487446822978543 0.662359453610508 0.0516271648695529 0.344343717296688 CAGCCTTCCCCGCGAGCGGACGCGGCATCGCCTCTGTCTCGCTTTTTTCTTATTTTTCTCCCCCCTTTCCCCTTCCTTTTTTTTTTTTTTTCATTTTTTTCCCCCTTCCCCCCCTTTCACCATTTCCCCTTGGAGGCGCTTCCCCTGGGCAGGGGCAGAGCCGGTCTCACCCCCCGCCTCTCCCCGGCCCCCGCCGCCCTATGGCGAGAGGGAACCCCCTCCCCACCCGGGCACAAGCGGCGGCGGTTGGAGGAGCGGGACCGGCGGCGGCGGCCTCAGGTCCGGGGGCGTCATGGAACTAATTCGCTGACCAACCCACCGGCTGCAGCCGTGCGTCCCGCTCGAGCGCCAGCTCCCGCGCCCTCCGGCCCGCTTCCCCCTCTTCTCCCTCCTCAGTCGGCCCGGTCCTGGTCCCGCGCGTCTCGTCGCCGAGCGCAGAGGAAAATGAGGTGGTAACGGGCCCCCGGATGACCCCTCGTCACCACTTTGAGGTCTACAGTTCTGCCGGGGAGGAGGAGGAGGAGGAAGAAGAAGAGGAGAAGGTAGCTACATCAAGCTGGGTGGCAGGCAGATCCATAGGATATCATGAAGTTTCCAGGGCCTTTGGAAAACCAGAGATTGTCTTTCCTATTGGAAAAGGCAATCTCTAGGGAAGCCCAGATGTGGAAAGTGAATGTGCCGAAAATACCTACAAATCAGAATGTTTCTCCATCGCAGAGAGATGAAGTGATTCAGTGGCTGGCCAAACTCAAGTACCAATTCAACCTTTACCCAGAAACATTTGCTCTGGCTAGCAGTCTTTTGGACAGGTTCTTAGCTACTGTAAAGGCCCACCCAAAATACCTGAGTTGTATTGCAATCAGCTGTTTTTTCCTGGCTGCCAAGACGGTTGAGGAAGACGAGAGAATCCCAGTACTGAAGGTGTTGGCAAGAGACAGTTTCTGTGGCTGTTCTTCTTCTGAAATTCTGCGGATGGAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTCACATTTTCCATGCCATTGCAGTGTCAACTAGGCCTCAGTTACTTTTTAGTTTGCCCAGTCTGAGCCCATCTCAACATTTGGCATTCCTTACCAAGCAATTACTTCACTGTATGGCCTGCAGCCAACTTCTGCAGTTCAAAGGATCCATGCTTGCCCTGGCGATGGTTAGTCTGGAAATGGAGAAACTCATTCCTGATTGGCTTCCTCTTACAATTGAACTGCTTCAGAAAGCACAGATGGATAGCTCCCAGCTGATCCACTGTCGGGAGCTTGTGGCACATCACCTTTCTACTCTGCAGTCTTCCCTGCCTCTAAATTCCGTTTATGTCTACCGTCCCCTCAAGCACACCCTGGTGACCTGTGACAGAGGAGTGTTCAGATTACACCCCTCCTCTGTCCCAGGCCCAGACTTCTCCAAGGACAACAGCAAACCAGAAGTGCCAGTCAGAGGTCCAGCAGCCTTCTGCCACCATCTCCCAGCTGCCAATGGGTGCAAGTATGCCTCTGCCAAACGCAAAGTGGAGGAAATGGAAGTGGACGACTTCTACGATGGGATCAAACGGCTCTATAACGAAGATAACGCTTCCGAAAGTGTGGGTTCTGTGTGTGGCACTGATTTATCACGGCAAGAGGGACAGGCTTCTCCTTGTCCACCTCTGCAGCCTGTTTCTGTCATGTAGCTGCAAGAGTTACCTTCAAGTGCAAACTAAGGTAGACGACTCGGGATGGGAGCATGGAAAACCAGGATAGGCTACGTAAGGAACCAACCTTAAAGTAATAGCTTCATGCCTCTCGGTGCCATAATTTGCCAAGAAAAAAGCTTTTCTTTGGTGCCAAGAAAGTTTCCGTAGTGGACTGACAGGCCGTTTCAACTCACAGTACTGCAAATAACTGATTTGAGGAAGACATGAAATCTTCATCTGTACCTCCAACGATGTTCCACTAATGATCAAAAGATCTCATTTATTTACAGCTACCTGTCAGAATAGGCAGGTTGGAAAAGAAGGTGAGCAGATACCCAGGCTTGCAATTAGTCTTTTCATATTAACACATTCAGCCCTAAGGGTGCCACTTGTTGGCTAGGGACTGATGTGAAAGCTACATGGTAACAATCACAAGGACTGAATACCAGTCTTAAGGATTCAAATGCAAGGATCTTCAAAGTGAGCCATGTTGCCAACACTGTCTCCAAGGTGGAAAGATGGCAGTCATCTGCAAAGCAAAAGGTTTTGCATAGAACTGCCATTTAAGTACAGTGAAAATTACTTAGTTTTTCAGATGTCCAGAACTGTTTACCCATACGGGACAATGATAAGTAGAAAAGTCAAAATAACTAAGAAGGAAGCTTAGGTACAGTCGATGGGAAAAAGTACAGTCGAGCCTACTGGTATGATGACCTAATTTTATCTCACTCAGCTCAGTGCATACTAATTCAGAAGATCAGGTTTCTCCTTTATACATGTGCTGTGCCAATCTCAAAGAGATCATCTAGGATACACTTTGAGCAATAAGGCAGAGTCTGTAGCTGAAGCAAGGTTTTTTGTTTTTTAAAAGACTATGAAAAATAAAAAGCCTGTTATCAAAATAGGTTCAGCTGGTTCAGTTCTCCCTGCTTTTCAACAATCTACTTTGGGACAAGCGAGTAATGTTTATTTTTCATCTCTCTCAGCTGGTCAGCCAAGAGAACTTGAGAACCTACCAGTTTTATCAACACTTGAGAAAAAGAACCTGAAGTAAACGGGAGGTTAGCTGTGTGCTTGACCTGTGCTGTCCATTACCCACGCTCCCTAGATAACTGAACAGAAACCAACCTGGATGGAACAGCCAGCTCTCTCACCCCTCCCACTAAGATGTCACCATTACACTTCTCTAGCCTGAGGCCTAAAAGGGGAACAGCAGTAATAGATTACACATTTCTCTACTTAAGGACAAAAATACTGCCTAATTTGAGTTTTAAATATTGCTCAAAAAATGTCTTTACAATCTGACACAAAATTTGTTTTCAAAATGAGTGACAGGGTAAAGTTGATATTAAAATAATGAAAGGAGCTTAAAAATAAATCCAATTATTGTGCTTAGTAATCAACAGTGGTTTCACACAATAGGATGTCTGTGTTCAACTTACAAGACTGATAGTATGTCATGCTGTAGCATCAGTTAATGAGTTGATACCCACCCATCCATCCATCAAACCACTGATCACATCTTAGCAGATTTCTGTCCTTGCAGATTATAGTGTAATATGGAGGGGATGGCTCTCAACTCATATTTTAACTATTTAATGGCTCAAATGAACTTGATTTTAATAACACGTAATAACAGTGTCTAAGTAAAGGAAGCCTCTCACCAGTATGCTTATCCAGTTAGACTAAATAACCTCTTTCCAAGAATCAAATGATTCAAGAGGCAGGCACTGTTGCTTCATCATTTCACCTTTCAACCAAAGCATATGTTTACCATTCTTAAATAAAGCGGGGAACTCTCTTAAGGATCTTTACCAAATGCAACTCATGCCACCAATATCCATCTGCTATGGGGCTAAAAAATGATGGAAATAAGCAAAAACTATTGACGAGAAATGAAAAGGTAGCAAACTGCACGTTCATGCTTAAAATAGAAATGAGTTTGGAAATTGCACCTTGACTACAAAAATTGCCCCTAGGAGGT EMBV3_28116 TGGAGTCAAAAGTTAGGGGATAACTCCAGGCTATAACGAGTCTTGCTCCTCCCAGAAGCC Gene BVT0102_303999 + 0 NULL GK000011.2:92903571-93011811 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24747 CACAGAGCCCTTGAGCATGGTGGGACTGAAGTTTTCATGGTGTGTGTGAAGCTTTCATTC Gene BVV0102_284449 - 1 EMBV3_12280 GK000012.2:32357228-32437632 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09926 TCTGGAGGAAACGGATGAAAATTTTCACAAGTATAAAGAGATGATTCATTCTCTGAAGAA Variant GeneID:518886|LOC518886:XM_002690075:12_cdna 320^481 1 EMBV3_40603 GeneID:518886 9 GENE LOC518886 NULL hypothetical LOC518886 EMBV3_08976 GAGGTCCTGGGACGAATGAATTTAAATTTCTGAAGCCGATTATCCCTAATCTTCCAGTCC Gene GeneID:615130|PCDHB14:XM_002689234:99_cdna Constitutive 0 NULL GeneID:615130 7 GENE PCDHB14 NULL protocadherin beta 14 EMBV3_15730 GGGGCATCAGGCTCCCAGAACAGACCCTTCCTGAGGGATTATCAAGGGTGATTTTTGACT Gene BVT0102_180736 + 0 NULL GK000013.2:52475838-52494960 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14231 GAAAGCAGTTTCATGTTCAAGGAACAAGAAAAACTGAAAAACATAAGTTTAAATCAACCC Gene GeneID:540599|MEAF6:NM_001024572:280_cdna Constitutive 3 NULL GeneID:540599 3 GENE MEAF6 C1orf149 C3H1orf149 FLJ11730 MYST/Esa1-associated factor 6 EMBV3_02670 CCGTGTACCTGCCCAACTGTGACCGCAAAGGGTTCTACAAGAGAAAGCAGTGCAAACCTT Gene GeneID:404185|IGFBP5:NM_001105327:50_cdna Constitutive 0 NULL GeneID:404185 2 GENE IGFBP5 MGC149012 insulin-like growth factor binding protein 5 EMBV3_37398 ATATTTTATATATAGGTTTGTGTATTATTGAGGATGTTTTCATTTTGCTGTTTGGACAAA Gene GeneID:540532|ZBTB44:XM_002699251:275_cdna Constitutive 2 NULL GeneID:540532 29 GENE ZBTB44 NULL zinc finger and BTB domain containing 44 EMBV3_11007 GGCTATGATAATGGAGACTGGATAGTACAAAGTCTGAAGTGGACCACCTGGCTGGAGACC Gene BVT0102_019137 + 0 NULL GK000019.2:55421685-55566587 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094585 TCONS_00094581 TCONS_00094584 TCONS_00094586 TCONS_00094582 TCONS_00094583 1 XLOC_057494 NonCoding TCONS_00094581 XLOC_057494 NonCoding NonCoding - 19:55517128-55520778 - TSS70717 3650 1 TCONS_00094581_5 83 0.588493150684932 1 0 0.00055757816261395 0.000308798909109253 0.000779174060033821 0.000150823548342445 0.000423838469274596 4.45857916468383e-05 9.17361138391852e-05 3.71463062310354e-05 0.000140212535009087 4.20152797553625e-05 4.67568724313351e-195 2.67295194250454e-06 6.10823879954052e-05 9.02135760130818e-06 5.35559370715391e-05 3.78681503656755e-190 0 0 0.000346905345136236 0.000348413412202379 0.00019816985521963 0 0 0 0.000497816314799521 0.000320664812954329 0.000186880279870099 1.05262187683328e-05 2.68897698077328e-318 6.54297962795522e-182 XR_231570.1 LOC101903917 PREDICTED: Bos taurus uncharacterized LOC101903917 (LOC101903917), 1e-25 123 66.98 0.113424657534247 XR_109178.2 LOC100505534 PREDICTED: Homo sapiens uncharacterized LOC100505534 (LOC100505534), misc_RNA. 1e-45 190 71.71 0.108493150684932 0 noncoding 0 0 0 0 0.0287960707767596 0.811277762401016 0.00989594631093205 0.865059629524071 CCATGGGATAATCAGGACTTTAGCAGAGGGGGAAAGAGAAGAGAATTATCACTTACTGAACAGTGACTGAGGTACCTTACATGTGGCAAGAACCCATTTTTCATAAATGACATGCAGATAAGACATAAAAAGCCCTAATTTGTAGCATGTGCCAATTTCCAAGGCGTAAACACTCCCACCACAGCCAGTTTCAAGACACCAACTATGTGATACTTGGCTTGTAAAACTGCTAAAAATTTAAAAACCATTTCTGCGAGCCAGTAGGAACCAGCCCCGCTAGCCCCCCAGTATATACGATAGGATTCAAAACTTCTCTGCAAGGAGGCGTGATGCTTAGTTAATTTCATGTGTCAGCTTGACTATGCCACGTGTGCCCAGATATTTGGTCAAATGTTATCCTTGGTGTGTCTCTGAGGGTGTTTCTGGATGAGATTGGCATTTGAGTGAGTAGGCCAGTAAGCAGATTGCCCTCTCCAGTGTCAGTGGGCCTTGTCTAATCAGTTGAGGACCCGAATAGGACAAAAAGGCTGACCCTTCCATGAATAAGGCCTGACTGTCTTGAGCTGGGATATTGACCATTTCTCACCTTTGTACTGAAACTGAAACACTGGTTCTTCTGGGTCTTAAGCCTGCTGATTTTTGGACTGGAGCTTACACTATTGGCTCACCTGATTCTTTAGGCTTTTGGACTCAGACTTGAATTACACTATCAGCCCTCCTGGGTCTCCAGCTTGCTGGCTGGACATCATGAGTGCTGCCCACCTTCATTTTGTAGATAGATAGATATCTCCTATTGGTTCTGCTTCTCTGGAGAAACCTAGTTAATACAGAGATAGTTGTGGTCACCAGCATAATGCCCCCAGCCCACCAAAGATGTCCATGTTCTAATCCCCAGAACCTATAAATATGTTACATCATGTGTTGATTACTTTTGTGTGTCAACTTCACAGGGCCCCAGTGCTCAGATATATGGTTAAACATACTCTGGATGTTTCCGTGAGGGTTTTGGGATGAGATTAACATTTAAGCAGATGGACTTTGAATAAAGCAGATTGCCCTTCATAAAATAGGTAGGCCTTACCCATTTGAAAGCCTGAATAGGACAAAAGACTGAGCTCCCCTAGGAGAAAATTCTGCCTTCAGGCTTGAACTGCAACATCAGCTCTTCCCTGGGTCTCCAGCCAGGTGGTCCACTTCAGACTTTGTACTATCCAGTCTCCATTATCATAGCCAATGTCTTAAAATAAATCACTTGATATATGTACCTACCCTGCATATATACATACATACACATCTGCCTCTCTGGAGAACTCTGGCAAGGGAGAAGACGGGAGAATTACGGTTGCAGATGGAATTAAGGTTGCTAATCAGGAGTCAAAGTCAGGGAGATTGTCCTGGATAATCCACAAGGGCACAATGGAACCACAAGAGGGGCAGGAGGGTCAGTGTCCAAGTGATGAGATGTGACAAGGATTTGACCAGCCATTGACAGCTTTGAGGATGTAGAGGGGCCACGAACCAAGGAACGCAGGCAACCTCCAGAAGGAGGAAAAGGCAGGAACAGGCTCTTTCCCAGAATCTTTAGAAGGGACACAGCCTTGCTGACACCTTGATTTTAGCCATGAGACCCATCTTCAACTTTGACCTCCAGAATTGTAAACTGATACACTGGTGGTGTTTTATGCCTCTAAATTTGTGGTCATCTGTTACAGCAGCTGTGGGAAACTAATCCCAATATGTTTTGTCCACAGTTAACTAGACGATGCTCCTAAAGCTCAGAGAAGCGGCCTGTCCAGGTTGCCATAGTGGTGAGCATCAAAGGGGTTTGAGCCCAGGGGGTATCTGATTCCAAAGCCCAAGTTCTTTGTTCTGTCTCATAAGAAAAGCCACTCTTGAAATATAAATGCCCTTGGGGAGGTTACCAACTTAGTTCTACTTCAGCCTAAGTAACTGGAAAGTTTTCTTTTCAGAAAATAAACCATCACAAAAGGCAATGTCCAGGTGAAGGCACAGCTGAGGTTGCAAGAAAGACGGAAACTGCCCCTTCCTCAGGGTGGTGTGGCCCAAATGAAGCTGGATATGAAGACTCCCAGGTGGTCAGCGGAAACGTACAGACTTTAAGTCTATGAGGCCAAGGGGCGTTTCCAAGCCCTGCACCGAGAGGCTTGGGTATCGACCCCTCCCTGGAAGCCGGAGGCGTGGCCTGTGGTTTGAGGTAGAGAAAAGCAACCTCTTAAGGCCCACAGCTTCAAAAGAAATTACCTGTCCCAGGGCAAGGAGATGAGGAGGAGGCTGGTCTATTTTCCTGGAAGAGGTGAAATATGAGGAGATGCTGGCCAAGCGCTTTCCAGAACGGATGAAAACCAAGCATCATCAGGTGCAGGAAGCCCGGTGAGTCCCATTCCCCAGGCCTTGGGTGCTTGTGCCCAAGACACGGGCACTAGATAGGAGAACGTGTATCTCTTGGGTCAAATGCCGCACCAAGCACTTAGGCTGGTTGCCAACGTTTGTTGAATGAATGAGTGATAGGGAACAAGATGGAAAATGAGGACGCCAACTTTAGACAAGACGCATTCACAGTCTCTATCCACCCTCCATCCCCGCCTTCTGAGGACCCCAGAACTGGTGGCCAAGAGAGGGCTTCCGGAGGTCCGAGGCAGGGATTAGGGCAAGGGTATCAAGCATCCTGGGTTTGTCTCGCCTGGGTCCAAGGAGCCCCCACACGGCCCAGCCCCCCAGCTGCAATTTTCTCCAGAATCACTCGTCTCCAGAGCCCCATATTCAAATAAGCACAGAAGTTGAGCGTGGGCTATATTTAGCAGAGTCAGAGGGAGACGATTGAGCAGAGTTGATCTGGAAGTCGGGCTCGAGGGACCGCGCCCCTCCCGCTGGATGTGCCTGGATGACGCTCCCAGGTGCCCTGAGAGCCCACGTTTGGGGGTCTGTGGGGGGAGAACCAGCATGATCCACAGCCTGCCTGGGCACCAGCGTTGTTTCTCCTTTGAGAGCTTTTACCGAGTCAGCACCACGCTTTTATGAGAAAAGATGGACTGGGCTGTGTTCTGGGGCCGACAGCCTGGCCAGGGAGCCATCCCGCTTGTGACCGAGGGCATTCGGCTCCGGCCTCTGGGCCGGTAACCTCTCGCTCCTGTTATTATCTTTAAAAGCAGCAGCAATCTGCCCCCTTGTGTATTAGTTTCCTGCAGTTGCTGTAATCAATTATCACAAACTGCATGGCTTAAAACAGCAGAAATTTTTTCCCTCACAGTTCTGGAGGTTAGAAGGCTGAGCTGAAGAAGGTGTTGGCAGGGCCACGCTCCTTCCAAAGGCTCTGGGGAGAAACTTCCCTGCCTGTCCCAGCTTCCTGTGTTGCACGCATGCTCGGCGTTCCGTGCTTTGTAGCTACGTCGCTCTAATCTCTGCTCCGTCTCCAGGTGGTCTTCTCCCCTGTGTGTATGTGTCCAAATTTCCCTGTTTCCTAAGAACTCTGGGCCCATCCTAATCCGATACAACCTCATCTTAATTACATCTATGAAGACTTTCCAGATAACATTCACAGGCACCGGGGTTGGACTTTGATACATCTGGGGTGGGGAGGAGCGTGCTATTCAATCGTGACACCATCCATCTCCTTCTGCCCAAGGACAGCA TCONS_00097868 TCONS_00097869 r 3' 45810 TCONS_00097868 TCONS_00097869 r 3' 49459 EMBV3_29058 AACCGGGGCTGCCGCGGGGAAGAACTACTGGATATTAGTGCTGAATCACCTGGCTCGGAC Variant GeneID:510774|ABHD1:NM_001035094:102_cdna 535^647 2 EMBV3_26268 GeneID:510774 11 GENE ABHD1 MGC127615 abhydrolase domain containing 1 EMBV3_05302 GCACAGAATGGAGCTCCTGGCTGGCCACCAAAAGATACTACTTTCACGGGTATTTCAGGT Gene GeneID:508881|CMTM6:NM_001035066:68_cdna Constitutive 0 NULL GeneID:508881 22 GENE CMTM6 MGC127534 CKLF-like MARVEL transmembrane domain containing 6 EMBV3_34976 TCTCCAGACCATGGACCCTGAGGTGTCCCTGCTGCACTGGCCACTGCTGACGACTTCCTT Variant GeneID:533578|NUDT22:NM_001038680:57_cdna 68^419 3 EMBV3_19003 GeneID:533578 29 GENE NUDT22 MGC134340 nudix (nucleoside diphosphate linked moiety X)-type motif 22 EMBV3_07044 TGCACCATCCAAGGTCAGGAGGGCCAAGGCTCCGTGCTAGATATTTAAGTTTAGGGGTCA Gene GeneID:511465|MGC140823:NM_001075517:592_cdna Constitutive 0 NULL GeneID:511465 29 GENE MGC140823 NULL mammary tumor virus receptor 2 homolog EMBV3_42038 ATTTTGCTGACGCCCAAGGAGCATTGAAGAATCAAGAAAACAACCAAGAGCAGCCGGGCC Gene BVV0102_059669 + 0 NULL GK000025.2:42827020-42882683 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17951 GAGTTTGAAGCCATGGCAGGAAGGGCTAGCAGCAAAGACTGGAAGAGGAGCATCCGCTAT Gene GeneID:509260|DEAF1:XM_002699411:59_cdna Constitutive 0 NULL GeneID:509260 29 GENE DEAF1 NULL deformed epidermal autoregulatory factor 1 (Drosophila) EMBV3_03172 TCCTTTTTCAGTTGTAGCACCCACCTGAATAGTCACCAGATCATTGCTTTAAGTGTGTGG Gene GeneID:537811|PHF14:NM_001102208:44_cdna Constitutive 0 NULL GeneID:537811 4 GENE PHF14 MGC143213 PHD finger protein 14 EMBV3_38717 TAATTATTTCTGCCAATTTATTTTCTTTTTACACTACTGTTTATATTTGATACTTTGTAT Gene GeneID:781260|CISD2:NM_001080338:14_cdna Constitutive 0 NULL GeneID:781260 6 GENE CISD2 MGC142830 CDGSH iron sulfur domain 2 EMBV3_09460 TTCGTCAACGGATTTCCTACGTTCCTGTACTCTGTTATTTTTATTTGGAAGAAAGTTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19861 CCTGTTAACATGAATGTACAGGATCATGACTACTAAGACTGTGTTCTCTGCCCTGCTTGG Gene BVT0102_119459 + 0 NULL GK000019.2:22089900-22098831 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095720 TCONS_00095719 1 XLOC_057776 Coding TCONS_00095720 XLOC_057776 Coding Coding LOC532189 19:22094803-22104979 = TSS71285 5210 1 TCONS_00095720_3 248 6 0.488550368550369 0.00205260498308177 0.00229674168870859 0.0011527540060166 0.00102327489173576 0.00122341433157205 0.000962294720696133 0.000850690577161895 0.000661494683714269 0.00185770939522229 0.000424479746162698 0.000234191268942521 0.000193197656431665 0.000206522219414947 0.000493874665179475 0.000481202109773261 0.00439939885265457 0.000830314756838927 0.00265597765890963 0.00151676969679167 0.00202353863877394 0.00100598948073626 0.00110170615746641 0.00131896772393935 0.00240689897299952 0.00137671991693183 0.00195001310992027 0.00113528141611322 0.000302351363046272 5.28012362772225e-05 0.000147709575066132 XM_003583547.2 CPD PREDICTED: Bos taurus carboxypeptidase D (CPD), mRNA. 0.0 9063 100.00 0.964299424184261 NM_001304.4 CPD Homo sapiens carboxypeptidase D (CPD), transcript variant 1, mRNA. 0.0 5214 82.46 0.998464491362764 TCONS_00095720_3 sp|O75976|CBPD_HUMAN CBPD_HUMAN Carboxypeptidase D; 6e-171 512 97.18 0.995967741935484 1 coding 0 0 1 1 0.0658550654552558 0.773594506960089 -0.0355376729949062 0.447464502577682 ACAAAGAGACTCTAAAGCATCTGGCATCTCTTTATGCAAATAACCATCCATCGATGCATATGGGTCAGCCCAGTTGCCCCAATAAGTCAGATGAGAATATTCCAGGAGGAGTAATGCGTGGAGCAGAATGGCACAGTCACCTGGGCAGCATGAAGGATTATAGTGTCACCTATGGCCACTGTCCGGAGATCACAGTGTATACAAGTTGCTGCTACTTTCCTAGTGCAGCACAGCTCCCTTCGTTGTGGGCAGAAAATAAGAAATCTCTTCTCAGCATGTTGGTGGAGGTTCATAAGGGAGTTCATGGATTTGTTAAAGATAAGACTGGAAAACCAATCTCTAAAGCAGTCATTGTGCTCAATGAAGGAATAAAGGTACACACAAAAGACGGAGGTTATTTCCATGTACTGTTGGCCCCAGGTGTCCATAACATCAACGCCATTGCTGATGGGTATCAGCAACAACATTCACAGGTCTTCGTGCGTCATGACGCTGCAAGTTCTGTGGTAATAGTCTTTGACACAGATAACCGGATCTTTGGTTTGCCAAGGGAGCTTGTGGTAACTGTATCAGGTGCCACCATGTCGGCATTGATCCTAACAGCTTGCATTATCTGGTGCATCTGCTCAATCAAGTCTAACAGACACAAGGATGGCTTTCATCGGCTCAGGCAGCATCACGATGAGTATGAAGATGAAATTCGCATGATGTCAACTGGCTCCAAGAAGTCTCTCTTAAGCCACGAATTCCAGGACGAAACAGACACTGAGGAGGAAACATTATATTCCAGCAAACATTGAAACACACGCCTTGCATCTCTCCCAGCATAAGTACCAAGCAAAGTTACAGTTCTTTTTGGGAGACACTGCATCAAGGAGAGAGACTGTCTTGTTTCTTCAAAGAGCTTTGGGAAGTTAACTTGCTAAATTTGTATTCTCTGTGAATTTGGCTGCAGTTTTGAACTTCCCCTCCTTAAAGTACTCTTACCTTTAAAAAAAAAATCTGCTTTCTATTTATGCAGCAGAGATGGGACAGCCACTTCGTATTTCTTTTATAATTTAAGATGAGCTATTTGGAGCTTATGTTGCAACTGCACAAAGCCAACTAGTGGATGTTGTCTTTTGCACATCAGGTGGTTTACTAGTGGCTTTAGCTTTTTCTCTTTATTTTAAATGGCCAAAAGAATCCAGAAACATTAAGGCAGGGACAGCAGTCAGAATCTGACATAAAGCTTTAAAAACTCTTTTTTTTTTTTTTTAACCTATTGAGAAGTACTTCTCTCTAGTTATTGAATAGCTGGAGTTTCTCTTATTATTCAGGTTTAATGGAGGCTGAATTGATTTTGAAACTTATATAGAGCATTAGGAAATGAATAAATGTGCTTCTGTATTGGGCTTTCTACCTGTTCCAAGGCTAGATCAGAACTGGTGGGCTGTGCTCTAAGCACAGAGGATTTCTCTACCTCTCTTTAAGGTTTAGCAAAGTTCTAAACATCCCCATTTTAAGGGATAACTCATTGACTCTGTTGTAAAAAGATCTCAGTGTCCACTTGAGTAGAGCCAAGAAGGAGATCTAGCAAAAGCTAAAACTCGTGTTGCCTATCTTTTAACGCGGTAAAACCCACAGGTGCTGTTGCTTTTGTCTGTGAAGCACTAGTTTATTCGAGGAATGCCTAATTCTCTAATACTTCCTAAATTCGAACCTTTTTTCTATGTTGTACACTTAGGGTTTTCAGATGACCTGGCAATCGACAAGATCTGAATTCTACTGAAAATACCTGGAAGTATGGAAGAAACCTCCTTGCACATTCTTAACCTACATTTGAACACAAAATATCTACACTTCATGTGCAGCCCAGGCCGGCACCCTCTCATAGCATCCTGTTACTGAAATAGCTTGGCCAGCCTTATTCATAAAGGCCTCTGCAAGTGATTGGGTTCTTTGTCCTAATGTTTCATTTGGCAGTCTCTTCTTGATCAACCAATTCTGTTGAAAGTTCAGTTGAAAGCACTTAAATATGGCTCCCTCTATTAAAAAACAAACAAACATAAACACCATAGTGAGAAAGTATCATCTTCAGTGCCACTGAAGTTATTGCAAACGCCTAAAAGATTTGTATTTTACTGTGTCTGTGATATTATGCTACTCAATGGAAATGATGCTTTTGTGAGTATGAGTCTTACCAATGATCTAACAGTTTAATACCTTGGAATGTTTTAACGGCCAAGTTGCTGCTGAACTTGTACTAAATCAGGGGATCAAAAAACTTGCTCTCATCTTTTCAAGTTGAATTCTATATCATTCATGTATCAGTCATCCCAAAGCTTTCACATGGAATGGTTTACCACCCACCTAGGTCATTCAACCCAGTTTCCTGAGAAATGTACCCAAAGTATAGCTTTACGCAGAGAGATCTGGTTTAGCAGGAATAATGGTCATGACATTTATTGCTGAGTATCTGTAGTCTAATTTGGGTGGGTCAGGGTTAAGCCCTTCCGGTATTAACTCTGTTATCAACACAACTCTCAGTTTTGAGCCCTTGCCACCCTACTCTCAGTCCACCACATGCACAGAACAGAGGTCACGAGGTTCTGGAACTTAATGAAATATACATGATGTAGTTTCTTCTGATAATACTTTACATTTTCCTTAGGGGGATGATGTGGTGGCATTGCTCTTTTCAGCTTTATTTTTAAGAGTGCAAAGTCAGAAAACCCACGAAGGGCCTGTGAGTGGCTGGCTCCACTTGGAACAACTGCAGGTAGAAGGGAAACAAAGTTGACGAGACAACCTTCAACTTTATTAACGTTGGTCTTCACGAGAGGATGCCTTTTAAATTCATTTCTCTCTTGAATGAAACAGATCTTTCACTGTACATCACAGTGACTGGAGTCCATGCCTTTTCAGCATGTGTAAAATATTTTTAGAGATGAACATACAAATAGTTCTTTTAATAATGTTTCCTGAAAGGAAAGCCAAATTCTGCTATAAATCTTGAACCTCTAATGAATTTCTAAATGATGCATTGCTCTGGAATGCATAACAAAGGCCGTCTCAGCCTGTGTTACCTGTTAACATGAATGTACAGGATCATGACTACTAAGACTGTGTTCTCTGCCCTGCTTGGTCTTTTATTTGTGGATCTAATGTAATTAATATTAGACCACATTAACTGCTTAAGGCATTGAAGCCATACGGCATGGGGAATGCATTTCTTCAGTATTTCTCCTAGAGACTTTTCATTTCCCTGGAGTCATGGAGGCAAGTAAGTATCACAGTATTAAGAAATTTGCCCAAAACCTGAGTTGTGCCTTTTTTAACTCACAAGGCGGTTTTTTATTTTTTGTCCTGGTGATCAGTGTGTAAGCCTTCTTCCCTCGCAACTCCTTAATAAAAGCAAAGTGATTGAGTAGGTCATATTCAAAGTGTCTGCCTGTGTAAATGCACTTGTACTGATTATACAGTTCAATAAGAAGAACTCAAGTTAATTTCAGAAGGAAAGGCCCTTTGGTTTTGATGTATTTTGCTGAACATTTGAGTAGTGGTTGGGACCCCATCCAGTTGAGGAATGCTTACAATTCTCTTTGGAGGGAATGTGCTTTGGGACTTTGTCATCCTCCAGAAAGGAAACAGAATGTATATTTGGCCCAGTGTGATTGACTGGTTAACCTTTGGTAACTTTCACTGAATGAGATTTGCTGAATTAATGAGTATTGAACGTAAAACTATGAGTTGGCAAATAAATAAAAGGTAGTGCTGATAACTGAGCTTATTGTGTTTCTGAGCTAACACCAGGTTACTCAGTATAACCATGACCTGTTCTTCTATTTCCATTTATTCTCAACAGTAAATCATTTTATTTTCCTGTGGCCAGAAATGCACTTGTGCCAGGTTTTGTCCTTGCTGTATTAAAAGCTTTTTGGCTGCAAATGCCATCATAGTGCCCTACGTTATGGTTCTCCAGCAGAATCGTTTTTAAGAGTAGCAACTTTAATGTTACTACCAAAATTCCACTACGGTCAACGTTCAGTGATTTTCTAGCTAGCAAATTTTTGATAAGTATTTGGATTTCTGATTTGCTGTAATTAAAGCAGATTTGGGGGGTGTGATTAGAGCCCTTGATTAATGTCAGCTAAACTTGAATTTCCAGTTCAGGAAGAAATATTTCCCAATACCCAATTCTCCTGTTTTTAGCAATAATTCATGAATATTTCACTTGACTTTCAGAATATTATCCTAGTTGATTTTGATTTGGCAGAATCTATTGTGAAATTTGAAAACAGGCTACCATTTTGAGGCAGTTGGATATAAATTCTATAAATGTGTATGACTCTGGCTTTTATGAATGGCATACCATGAGTATGCAAGCTACATTCTCTGCCGGCCATGCTGCAGATTTTCTGGAGGTATGACATAGTGGTATTTTTCTACTCTCAGATTAAAAATCAACTTTTCACCTCTCCACTTTTTCAGAGTGACATTCCCCAGCTCCAGAACAATCTATAGCTATTTACATGAGGTGCCCAGGACTCCTTCATCTCAAGTGCTTCAGTCTTTGGTTTATTATCATGCACTGTGCCTTCAAAACGAAATTTTTAAAAGGGACTTTGAAGCTGAATAGTAGTTTAAAAAAAGTCAATCTGTGTAATTTATGTGAAATCTAACTGTAATGAGGTCCTTTCTGTTTTTTATATGTAAACAGATCTACTAATCCTGTATAAAGGTTATTTTATGATGTCTGTCTTTCTTTGTGTTTTGTCTCATAATCTTTTTTCAAAAGCAGTAGACCAGAAAAGGTTATTGTCTCAGTTCAAAAGTTATGGATTTAGTGTTTCTACCTTTTGAGGGGAAAAATAGTACCAAAGAATACAGGTTGTTAGCTGCAGAGTGTTTCTGTCTTCACGAATTGGCTTAACATAAAACTATGTTTCTGGAATAATTACATAATAGCCACAGGTCAGCTAGATTGATGTGTGAGTCTAGTCATTCCACAAGGAACATAATAAAACTGGCCATGGAAAGGTTTATGTATCCATCTCAAGCTTGCTTGTTCTAAATTTGGTTCTTTTCATAGATAAGCAGAGTTAGAGTAATATGTTCTGGCACTTTTAGACACAGTGGTAATGAACTTAAAAGCCCCTTTTCACTTAGCAATGATTTGTTGATACTGTTGCTCTAACAGGAATTGAGAAAACAAAGTTATATTAAAA EMBV3_43496 CAAGGGAAAAGGAATTCTAAGATGATTATACTGGGGCAAGAACTGCAAAGTGGCTCAGGC Gene GeneID:540949|ANKRD49:NM_001014965:23_cdna Constitutive 0 NULL GeneID:540949 15 GENE ANKRD49 FGIF MGC129028 ankyrin repeat domain 49 EMBV3_27518 TGCACTGAAACAGGAAAATGCTTGGGAGTTGCCACTGATACACAGGCTGGCTTCTTGGAC Gene GeneID:522819|TEX10:XM_002689742:18_cdna Constitutive 0 NULL GeneID:522819 8 GENE TEX10 MGC137448 testis expressed 10 EMBV3_18378 AATGCACACCTGAGTGAGAAATGGAATCCCTGACAGCTGTGTCACTATCAAGCACCGGTC Gene GeneID:540869|SLC30A4:XM_002690940:273_cdna Constitutive 0 NULL GeneID:540869 10 GENE SLC30A4 NULL solute carrier family 30 (zinc transporter), member 4 EMBV3_15046 ATGTCTGATTGCTTCCTTGAGCTGGGTTCCCGGGTGTGTGAAAAAGCTCCAGAGGAGACT Gene BVV0102_031300 - 1 EMBV3_37742 GK000023.2:17901665-17978580 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36372 CCAGAACTCACCCCATGGTACCTTACAAGTTGGTGGAACAAGCCAGACATCTTTCTCAGC Gene BVV0102_061530 + 0 NULL GK000026.2:21244553-21248524 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151783 TCONS_00151784 1 XLOC_092184 Coding TCONS_00151783 XLOC_092184 Coding Coding SEC31B 26:21247001-21280208 j TSS113371 3865 1 TCONS_00151783_6 1122 26 0.884388363548756 0.000103433297626189 8.89183508472045e-74 0.000328194213775082 7.21220613335506e-30 1.67958960658377e-27 1.57937757760147e-121 1.53886861673633e-05 1.07741508808394e-06 5.51489539080893e-39 1.65956228106633e-12 3.41923466775139e-19 6.33673373489968e-79 3.82679217441528e-10 7.32056128580954e-10 2.88905356281221e-06 6.88697201515774e-117 0 3.99733160521963e-16 2.47074287531843e-14 2.01648518322019e-18 2.76730744804572e-74 3.33004552511078e-77 3.11624182886325e-45 1.11628008552357e-30 5.27600939351322e-06 6.92991171575403e-95 0.000573874535853818 4.58916003434582e-71 1.95227017516998e-122 3.82778565010273e-85 XM_005225491.1 SEC31B PREDICTED: Bos taurus SEC31 homolog B (S. cerevisiae) (SEC31B), 0.0 6024 98.63 0.878913324708926 NM_015490.3 SEC31B Homo sapiens SEC31 homolog B (S. cerevisiae) (SEC31B), mRNA. 0.0 4114 86.89 0.858732212160414 TCONS_00151783_6 sp|Q9NQW1|SC31B_HUMAN SC31B_HUMAN Protein transport protein Sec31B; 0.0 1816 82.18 0.999108734402852 1 coding 0 0 0 0 -1.13878001658019 0.0199975789495698 -0.0216357182316986 0.683833738921955 CGGAGCTCCAAAGCCCTGAGGGAACCGGCTCCCGATTCCAGCTCTGCGGCCCCAGACCCTTGAGCTGGGCTCTCCGCGCAGGACAGACCATGAAGCTGAAGGAGCTTGAGCGACAAGCTGTCCAAGTGTGGAGCCCAGCCAGCCAGTACCCTGTGTATCTGGCCACAGGAACATCTGCCCAGCAGCTAGATGCCTCCTTTAGTACAAATGGCACATTGGAAATCTTTGAGGTTGATTTCAGGGACCCCTCTCTGGACTTGAAACGCAAGGGAGTCCTTTCTGCCTCCAGCAGGTTTCACAAGCTGATCTGGGGGAGCTTTGGCAGTGGGCTTCTGGAAGCCTCCGGGGTCATTGCAGGCGGCGGGGACAATGGCATGCTTACTCTGTACAATGTGACCCACGTCTTGTCTTCGGGAAAGGAGCCTGTGATTGCCCAGAGACAGAAGCACTCTGGGGCTGTCAGAGCCCTTGACTTTAATCCTTTCCAGGGCAACCTCCTGGCCTCAGGGGCCAATGATTCTGAAATCTTCATTTGGGATTTGAATAACCTGAGTGTACCAATGACCCCAGGATCCAAGTCACAGCAGCCCCTGGAAGATATCAAGGCTCTCTCTTGGAACCGTCAAGTTCAACACATTCTGTCTTCTGCTCACCCCAGCGGCAAGGCAGTCGTGTGGGATCTCAGGAAGAATGAACCTATCATCAAAGTCAGTGATCACAGCAACCGGATGCACTGCTCAGGCCTGGCCTGGCACCCAGACATCGCCACCCAGTTGGTGCTTTGTTCAGAAGATGATCGTCTTCCAGTAATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCACCCCTAAAGGTGCTGGAGAGTCACAGCAGGGGGATCCTGTCAGTGTCATGGAGTCAGGCTGATGCTGAGCTGCTGCTCAGTAGTGCCAAGGACAGCCAGATCTTGTGCTGGAACCTGGGGAGCAGTGAGGTGGTGTATAAACTACCCATGCTGAGCAGCTGGTGCTTTGATGTGCAATGGTGCCCTCGGGACCCTCTGGTGTTCTCTGCTGCTTCCTTTGATGGCTGGATCAATTTATACTCTGTGATGGGTAGGAGCTGGGAAGTCCAGCAGATGAGACAGGCTGACAAGATCTCATCTTCCTTCAGCAAAGGCCAGCCTCTCCCACCATTGCAGGTACCAGAGCAAGTGGCCCAAGCATCACTGATACCTCCCCTGAAAAAACCCCCCAAATGGATGAGGAGGCCAGCAGGTGTTTCATTTGCTTTTGGGGGCAAGCTGGTGACCTTTGGCCTCCCCAGCACCCCTGTCCATCAGGTGCCACAGCCTTGCCTCCGCCTAGTCTTTATCAGTCAGGTCACCACAGAACCTGAACTCCTGGCACAGTCAGCTGAGCTGCAGGAGGCCCTCGGATCAGGAAATCTCCTGAATTACTGTCAGAACAAGATCCACCAAGCATCACTGCAAAGTGAAAAGATGCTCTGGCAGTTTCTGAAGGTGACTTTAGAGAAGGACGCCAGGATGAAGTTCCTGAAGCTATTAGGATACAGTAAAGATGAACTTCAGAAGAAGGTGGCCACATGGTTGAGAAGTGATTTGAGGCTGGGTGAGATCCCTCAGTCCAAGGGAGATGACCTCAACAGTAACAGACAACAGGCCTTCTCCATACAGACCTCCAAACATACCACCTGGGAAGCCTCGGTCTCCTCAGACTTCTTTGATGAGCTGATCCCTCAAAACATGACTCTGTGGGAGATCCCCATCACAGAAGACACGGAGGGACTCCTGAGCCGGGCTCTCCTGCTTGGAGAACTGGGCCCTGCCGTAGAGCTGTGTCTGAAGGAAGAGCGCTTTGCTGATGCCATCATCCTGGCCCAGGCTGGAGGCTCAGATCTGCTGAAGCAAGCACAGGAGCGCTACTTGGCCAAGAAGAAAACCGGAATCGCCCCGCTGCTAGCCTGCATTATACAGAAGAATTGGAAAGACATGGTGCATGCCTGTAGCCTGAAGAACTGGAGAGAGGCTCTGGCCTTGCTGCTGACATACTCAGAGCCAGAGAAATTCCCCGAGCTCTGTGACAGGCTGGGAACTCGTATGGAGCAGGAGAGTGGCTGGGCACTCACCTCTGAAGCCAGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGGCTGGTGGAGTGCTGGGCAAAATGCCAGCCGGCTTCATCCCCCATGGCTTTACAGGACCTGATGGAGAAAGTGATGGTCCTTAACAGGAGCTTGGAGCTACTGCGGGGTCCTGATGGGGTGAGCCCAGGCCCTGCCACAACCTACAGAATCACTCAGTATGCCAACCTCCTGGCAGCCCAGGGCAGCCTGGCCACTGCCATGAGCTACCTACCCAGTGACTGTGCTCAGCTACCAGTTCAGCAGCTGAGAGATCGACTTTTTCATGCCCAGGGTTCTGGTGTCTTGGGCCAACAGTCTCCCCCTTTCCCTTTTCCCCGGGTTGTCGTGGGAGCTACCCCCTACTCTCAAGAGACATCCTCTCCCAGACTGAAATTCCAGTCTTCTCACCAGGTTCCAATTCTACCTCCAAGGCCAAGGATTTTTACACCTCAGTCATCACTAATGATGCCCTTGACACCTTCCCATCCTAGCCCTTATCAGGGCTCCAGAATGCAGAATACAAGTGACTACAGGCCATCTGGGGTCCAGGAAGCACAGCCTTTGCCTCTGGGCCCTGGGGTAAGGCCTGCTTTATCTCAGCCTCAGCTGTTAGGAGGGCAAAGGGCACAAGCTCCTAACCCCGTGGGATTCCCTGGAACATGGCCTCTCCTGGCTCCACCCATGGCACCCCCAAACATTATGCAGCCTGGCTCTGTCCCCCTGCCTAGGGCTCCTCCAGTGCACCCTCTGTTTCCTGTGAGAGCACCAGGCTTCAGCCCTATGAGCTCCCAGCCACCAGCCCCTCCTGTCAGCTTCCCTGCGGCCCACCCTCCAGGAGGGCCAGGTACTCCATGCGCTGGTGTCCTCCCGACCACTGGCATCTTGATTCCTCACCCAGGACCTCAGGATTCCTTGAAAAATGCTCCAGTGCCCAAGGGAAACCTCCAGAGGAAAAAGTTGCCAGAGACATTTATGCCCCCAGCACCAATTACTGCTCCAGTTATGTGCCTCACCCCTGAGCCTCGAGGGGTCCTTTCCTCACAACCTGCTGTCCCCAGTCAATGTCAGCAGCCACTGGACAAGATCAACAGGAAGGAGCTTCCCCCTGAACACCAGTCTTTGAAGATCAGCTTTGAGGCACTTCTGCAGCGCTGCTCCCTATCTGCCACTGATTTAAAGACAAAACGGAAGCTAGATGAAGCTGCGCAACGTCTAGAATGTCTGTATGACAAGCTCTGCGAGGGGACATCTGCAGATTGCCTCTATGGGAGCCAACATAAATATTTCTCCTCCAGGAATGCGGGTTAATTAAAAGGAAATGAATGAGTGGAAGCATCCAATCCAGACCCACAATAGGCGAGTGCCCTGGCCTGCCCTTCCCTCCCACCACCCCCAGCACCGCCAGCACCGAGCACGACCCTGTCTATGTCTTTGCCCTAACCTGCTGCTAAGGCCAGTTGAGGCTGAGATTCTTTTCAAGGAAAGAAAGCCCTGCCTGTGTGTAGGCTCACAGGCCAGGGACAGGAAGGAGACAGTGTTTTGTCCCCTCCACCCAGCATCCTTGTCACTTCTCAGGACCTCCCTCCGCTTCTGTCCCCTGGCTGAGACAGATGGACTCCTAAGGAGCACACAAGAGGAGGGGAGGGGCCTGGGTTCCAGAACTCACCCCATGGTACCTTACAAGTTGGTGGAACAAGCCAGACATCTTTCTCAGC EMBV3_32252 TTCGAGCCCTGGTGGTGGAACTAAGATCCCACAAGTTGTGTAGGATGGCGAGGGAAAAAA Gene BVT0102_111214 - 1 EMBV3_06020 GK000018.2:64080945-64117290 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43009 GTGGCCCAGCCAGTGACAGCCTCCCCGCAGGTCCAGCCGGCGCAGCACGTGTACCCCGCC Variant GeneID:534475|RFX2:NM_001102172:69_cdna 116^205 2 EMBV3_29711 GeneID:534475 7 GENE RFX2 MGC148739 regulatory factor X, 2 (influences HLA class II expression) EMBV3_21849 CCAGAGTGAAGAGGAGAGATCCGATGAGGAGCCAGAGGCCAAAGAGGAAGAAGAGGAAAA Gene GeneID:513650|PA1:NM_001075632:317_cdna Constitutive 0 NULL GeneID:513650 25 GENE PA1 C16orf53 C25H16orf53 MGC137983 MGC140556 PAXIP1-associated protein 1 EMBV3_34516 CATCTAATCACTGTCAAGTTGAAGGCGAAGAGCTCCTTAATAAGCATTTATACTCAGTTT Variant GeneID:614512|FANCL:NM_001076332:170_cdna 492^560 5 EMBV3_38783 GeneID:614512 11 GENE FANCL MGC133719 Fanconi anemia, complementation group L EMBV3_23374 AGGACCTTGTCCTGCAGAACTCGGCCGCAGGAACCAAATACCAGGCCATGCTGAGTGTGG Variant GeneID:507327|P4HA2:NM_001159409:42_cdna 596^733 2 EMBV3_08969 GeneID:507327 7 GENE P4HA2 MGC127031 prolyl 4-hydroxylase, alpha polypeptide II EMBV3_22387 TGGACAGTTTTGTGAGCCTGTACCTGCATCCTTCCATTTCTGGCCTGGATGCAGCTGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02057 AGAAGCTTTTCTTGCTGGCGTGCGACAAGGAAACTAATGGAGAGAATTCAGAATCCTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32037 TCTGTTGGGAAACCACAGGCTGGGCCTTTGAGGACACAGATCAGAGAAACGGCGACTCTT Gene BVT0102_060437 + 0 NULL GK000024.2:49013493-49071078 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143118 1 XLOC_087540 NonCoding TCONS_00143118 XLOC_087540 NonCoding NonCoding - 24:49016858-49017336 - TSS107329 478 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000386780354362505 0 5.24915381923578e-05 0 0 0 0 0 0.000701450434746452 0 0 0 0 0 0 XM_005196789.1 CTIF PREDICTED: Bos taurus CBP80/20-dependent translation initiation factor (CTIF), transcript variant X1, mRNA. 0.0 863 100.00 0.997907949790795 NM_014772.2 CTIF Homo sapiens CBP80/20-dependent translation initiation factor (CTIF), transcript variant 1, mRNA. 3e-118 428 80.40 0.985355648535565 0 noncoding CTCTGATCACGCCCTGGGCAGCTGCAGGGGCGGGGGCCCAGACAGCCAGGCCGCCGCAGGAGCAGCCCCGAGGGGCCACACAGACGCCAAGCCCCAGGCTGTTATCTGGCATCAGAAGCCAGCCAGTGTTCCTCGTCCCGACAGACTGTCCGGCCTGCCCGCGAAGTCCTGTCCCTCAGCTGCCGGCGCTCTGTTGGGAAACCGCAGGCTGGGCCTTTGAGGACACAGATCAGAGAAACGGCAACTCTTCTCCTCTGCTCGGGACACTGGCACACAAGGGCTGCCTGCCTCGCCCGAGCCAGCTGGGAGCCTGGCGACGGGTCCTACCTCCCCAGAGCAGGGAGCTGGGGGCTTCCCGCCAAAGCTGCGGCAGAACCCTGCTCGTGCGACGACCACCTTCCCTCCCTTGGTATGTCCTGCTTTCCAGCTCAACCCAAACTACAAGTGGGTTTAAAAATAAACCACACCAAAAAACAGA TCONS_00139219 TCONS_00139220 TCONS_00139221 TCONS_00139222 . 3' 3367 TCONS_00139219 TCONS_00139220 TCONS_00139221 TCONS_00139222 . 3' 3844 EMBV3_38685 TTCCAGGTGATACAATTCTGGAGACTGGAGAAGTAATCCCACCCATGAAAGAATTTCCCG Gene GeneID:327665|NDUFB6:NM_175787:40_cdna Constitutive 1 NULL GeneID:327665 8 GENE NDUFB6 B17 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa EMBV3_23843 CCAGGGGAGCTGAAAACCTTCCCCTGGAATTCTGGCTCGCCTCTGCAGGGTTCAGGTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11573 CCCTCATTGGCATTGGAATCACCCTCTCTGGGGTTCCTGTCTACTTCCTGGGTGTTTATC Gene GeneID:530661|SLC7A6:NM_001075937:327_cdna UTR3_Alt 2 NULL GeneID:530661 18 GENE SLC7A6 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 EMBV3_29164 ACTTACCACCGATTAAGGCCACAGGATAAATTTCTGGTACTGGCGACTGATGGGCTGTGG Gene GeneID:280891|PDP1:NM_173949:6_cdna Constitutive 0 NULL GeneID:280891 14 GENE PDP1 PDP PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 EMBV3_18063 ATCTTGGGGAGTTGGAGAGCCAGAAATGTGCAAACCTCTTGATGCCCTTTACCACCTGGT Gene BVV0102_169183 - 1 EMBV3_42849 GK000019.2:25403238-25409132 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095974 TCONS_00095966 TCONS_00095968 TCONS_00095970 TCONS_00095965 TCONS_00095973 TCONS_00095963 TCONS_00095971 TCONS_00095969 TCONS_00095964 TCONS_00095972 TCONS_00095967 1 XLOC_057843 Coding TCONS_00095973 XLOC_057843 Coding Coding UBE2G1 19:25406831-25496770 j TSS71420 4457 2 TCONS_00095973_4 99 7 0.950521470346239 0.00108815647893353 0.00101052841770438 0.00050612979974547 0.000503019961008072 2.83341856422582e-05 9.55980176853302e-06 1.47019400760887e-06 0.000687357176165166 0.000200285784458528 3.87255971019092e-34 4.35493323549178e-43 2.01181101516669e-06 0.000179602618227208 0.000973736553565881 3.59088594013141e-05 0.000502899226299575 3.25808986493594e-32 2.50022860662652e-48 0.000925410036587778 0.000924465749313838 7.5302980150904e-06 8.50673435107916e-48 0.000193790882079401 0.00025534130832671 0.00106092608623029 4.76885220974335e-28 0.000826368261501155 1.05927706403211e-29 8.51573653472397e-25 1.46867075940781e-16 NM_001082458.1 UBE2G1 Bos taurus ubiquitin-conjugating enzyme E2G 1 (UBE2G1), mRNA. 0.0 2906 100.00 0.361229526587391 NM_003342.4 UBE2G1 Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBE2G1), mRNA. 0.0 2847 88.28 0.506394435719094 TCONS_00095973_4 sp|P62253|UB2G1_HUMAN UB2G1_HUMAN Ubiquitin-conjugating enzyme E2 G1; 2e-69 209 100.00 0.98989898989899 1 noncoding 0 0 0 0 0.220615512287516 0.346168018318142 0.0121479896937513 0.864533046152931 CAGCGCGCCTGCGCGGAGCGGCCCTGCGCGCTGTGAGGCTGTGGCGGGGGAAGGCACCGGTGGGGCCGACGGGCGGGTTGAAGGAGGGAAGCGGGCGAGCGAAGTCCCAGTGCGCGCCGCGGCGGCACGGGTACCCTCCCCTTCCGGGCGTGAGGCGCTGTGAGGAAAGCTGAAGCGAGCGGACTCGCGCCGGCAGCGAGGCGCCGCTACCGCCGCCACAGCCCAGCCTCCCTCGGCTTCGGCGCTCCCGTCGTGGGGGCCCGGGTTCCTCAGCACACCCAGCTCCAGCATCTCCGGAGCCTGTGCCCAGTTCTTCGGAAGCCCCGGCGCCAGCCCGGGCCCTTGGCGGGGAGGATGACGGAGCTGCAGTCGGCACTGCTACTGCGAAGACAGCTGGCAGACATTCTCTGTTGACTTCTTGCTATGACAGATGTTTTCAGTCCCACTTCTCACTACTGACCTTCCTCGTACGACGGTCACAGAACTGGCGCCTCTCTGGGGTTCTGCCCAGAAGATTAGCCTTCCTCGGCTGCTGCTCCCCCTCTAGCTCAACAAAAATCCAGTGGAAGGCTTTTCAGCAGGTTTAATAGATGACAATGATCTCTACCGATGGGAAGTGCTTATTATTGGTCCTCCAGATACACTTTATGAAGGTGGTGTTTTTAAAGCTCATCTCACTTTCCCAAAAGATTATCCCCTTCGGCCTCCTAAAATGAAATTCATTACAGAAATCTGGCATCCAAATGTTGATAAAAATGGTGATGTATGCATTTCTATTCTTCACGAACCTGGAGAAGATAAATATGGTTATGAAAAGCCAGAGGAGCGCTGGCTGCCTATTCACACCGTGGAAACCATCATGATTAGTGTCATTTCTATGCTGGCAGACCCCAATGGAGACTCACCTGCCAATGTTGATGCTGCAAAAGAATGGAGGGAAGACAGAAATGGAGAATTCAAAAGGAAAGTTGCCCGCTGTGTAAGAAAAAGCCAAGAGACTGCTTTTGAGTGACATTTATTCAACAGCTGTAACTTCACTTATTTCAGGGTCTCCAATTGAGAAACATGGCACTGTTTTTCCTGCACTCTACCCACCTATTGCTGGACTTCTGTTGTAACAAGTTGGCAAACACTGGCTGGAACTGGTCTGCAATAAAACATGCCAGTATCAATGCTGACAAGAGCCTAACAAGTGCCAACTTACAGATGATTACGCATTTTGAATTCTAATGAACTGTTTTAACCTTCAGGAAGAATTGTAAAGACCTGTACATAGCACAACATGATCCGGATAATATATATACTGTTCATGTACATCCACAAATACACCTTGTACCAAATAATGCTTTCTTGTAGTAGAATAAGAATCGTGTAAATTCTAAAAAATTTTAGCAGGTTTTCTTTCCTTATTCATTGTTTCTTATCAGTTTTAAAAGACTCCTTAAAGCATGTCAGATAAAAAGCAATTAGGATTAAAAGTTTCCATTTAATTTCCTTTAAACCATTGAGGCTTCATTAAACTCTTTCCACTTACTAAACTTTTGTATCTTCTTTGTTTTGACACACTCCCCTTTACTTTTATCTCTTGTGTCTGCCAGGAAGTTTTCAAATCATTTAGTTCAAATACCGAAGTACTCAATAAGCAACTACTTGATTTTTAATGATGACTTCAGAGGAGCGGTCATCACTAGGTGCTTTGTCCCTTTTGTATTGTACCTGCACCCATCTCTCAGATTGGATACAGCAATAACATTTTCTTGTCGTTGAGAGCTCTTGAATTCAGTCATTATCCCTAGGAACTAAAAAGAGTTAGTTCTGGATTCAATTCAGATTTAAAATGATTGCAATTTACTCCCAACACAAAACTCTGATTTGGTTTTATTTTTGCCCTCAGTTACCTAATGTGAAGGTTGGATGAATAAAGCATGCACAGCTACAGGCTTTCTACTTAACTTCTGGGTTTGCTATTAAAAATGCTGTTTACCCTCGTACCCTTCCCCTTAGCCCTTCATATTTCTTTGCCTCTATTCTAATACTGCAGAATTTTCTCACCTATTGTACAAAGAAATTGCGATGTATATTTTCATGTAATTTGATTTTGGAATTCTGTCACCTTATGTAGTGAGTTCTTCCAAAATATAATTTTTTTCCAATAATTTGTCAAGTTGTTGGCTTTTATTGTATTGAATGAAGGTTATAATAATGAGTGTCAGAGAAGTGCAGTTTAGAAAAATCTCAGGTTGATTCCTTATGCAAACAAACTTAATACTTGAAAATCACACGGCCATCAGTATATATATTGGACTCTCTATGGATTCTTATATGAATCTCAAAGCATTACAGGGCTATAAATGCTTTGCTGTTTGACATATAGATTCTGTCACTGACATAGTCCACTTGGGTTTTTCTTACTGTTTGAGCATAAATATATTTCATACTATAAGTTTTCTAAAACAGTTTTCAGGAAGTGGTAAAATAAGCATGTGCAGTGTTAAAGGCAGGCCCAGGTTTCTGTGTTTGGTATAAAGTTGGGACTGGGACAGTGTCTGGCATAGAAGGGGCAGAACTTGAGACAGTACCTGATGAGACATGGTGTTTAACTGTTGAGAATCAGTGAGAACTGGTACATCTCTGCTTTGTGGGGTTTGGAGAAATTTTTTGACAGAATGAAAGGATTCCTGCAAGTAGCCAGTCCTTTACAAACTTTGCGTGTCTTTTTTAAAGTGAAATAATTAAGGATGTAGTCAGAGTAGAGAGTGATTTTTCTAAATCTCAGCCTCTTCTTCACTCTGAAGCATTAAAAAACAAACAAAAAGCCTGTAAATGTATGATGGCTGAATGTGAAACTGTTTTGAGTCACTGCAGCCAGTTTCTCTAAGAACTCTGCTTGTGACTTTACTTTTTTTGTGTGTGTGACTTTACTTTTTCAAAGACTCTGTCAGCACTGTTTCCCCAAAGCACCAGTACTGCATACTTACCTGGGACTTTGAATGCCATCCCTTTTATTCTTAAATTGTCCACGTGATGGTGGTTTGTGGCAAGATGGAGTCTGAGTTTTGCTCTCTTGTGGCTGTAATTCTCCTAGCAATCTCTTGAGTTAAAACCTGGGATTTGACTCTTCAGGGAGGAGCAAAGGACCAAGTAACTCAGGGACAACTATTCTTAAACTCTTAAGTGCCACTTTAATGCAGTTACTTTGGTGTGATTGTGTGTTTTTTAGGGCTAGATCTTGGGGAGTTGGAGAGCCAGAAATGAGCAAACCTCTTGATGCCCTTTACCACCTGGTGCCCTGACCATGCTACATATGGAAACACAAACCTCGAGAGATGTTTCGGCTTCCTCTGTCAGAGGTGTCATCTGTGCCTTTCCCAGTGTTCATCTGACAGTGTGAATCTAAATGGCTCTACATTTGATATTAAACCACACTCAGGTGACACTAATTCTGGTGGCTTTTGTCCCAGCAATGCCTCATCATTTGTGTGAGGTGAGTCCTCTGCTTTAGGGAAAGGATTTTTCTCCCTGACCACGTGCCAACTATCAACAACACCTGTATAGTCTTAAGGATTGTAGAACTGTTGGCTGTTTCCTAAATTTACTCCAATTTCTTGTAAAGGCTTATCGATTTCAGTCTGGGCTCATAATGAGATGGACTATTTCCGTGGCTTTCTGGCCTCTTCTGGTGAGCTTAAAATCCAAATGAGGTTGGTTTCCGTGTCATTACAAGGTAATATCTTTGTGAGGTTTTTCGACTAGTTCTGTGATCACTTGGGTGTCATAGTATCTTTAATGGCCTTCATTCTTGGTTGTGAAATTTTATATGCTCATTCACCCTCTACAAATCTGCCCATTTGGGATTGTCATGCCTGTGTATCTTTGCCCATCTGGTCTCCAGTTGGTGGAATTACCTTTTGTGTACTGCCACTTCTCAGCATCTTTGAAATTTGACCTAATGTTGCTTCATTCCAGTTTTTTTTTTTCCTGTAATTTGTTGATTGTATTTATATGAGAGTTCTGTTGTGATGTTTACTGTATGTAAAGCACCTGGATCATGTGATGGGTGCTCTATGAATCAATAAATGATGACTTAGAGGCTGTATCATGAGCTGTTTTGGTTTTAGGATGTAGGTCTCCAAAGTAAGTTATGGTATTCTTTCTATATAAACAGCACATGATACCAAAGGGTCCACTGGGGAATCTTGATAACTAATTTTTAAAACTTCATTTAAAGAAGGAACCAGAGGATAGGAAGTTCACTTGACTTCCAATCTCATATAATAGTCTTAAAATTTCCAGTATGAGGCCAGCCAACCATTCTTCATCAGAATTTCATGCATGCTGATTTAGAACCTTATGTAAAATAAAATGAGCACCTGTTAGAGCATTACTGGGGATTTTGTCTGTAGCCTAAACTGGTTGTACCATGAAGATAAGCTAAAAGGTAAAGAACCCAGACTCAG EMBV3_18117 GTGGGAAACGACAAAGTTCCTGCCGTTCCCTCGAAAACTGAAAGGTGAAGCTTTGCTGGA Gene GeneID:528783|SDF4:NM_001035375:163_cdna Constitutive 0 NULL GeneID:528783 16 GENE SDF4 MGC128157 stromal cell derived factor 4 EMBV3_12400 CTTCAAAGAGCAAAAGGAAGAAGAAACTGGAGAAAAGTTAGCTGTTGAAAAAGTTGGAAA Variant GeneID:281092|CROT:NM_177494:5_cdna 513^694 1 EMBV3_07509 GeneID:281092 4 GENE CROT MGC134514 carnitine O-octanoyltransferase EMBV3_28532 ATACATGCAGTACATCCACCACCGCCTGATTCACCTGACCCCTGCCGACTACGACGACTT Gene GeneID:533041|MGC159954:NM_001102149:353_cdna Constitutive 0 NULL GeneID:533041 28 GENE MGC159954 NULL hypothetical LOC533041 EMBV3_21252 ATGAACAGTGGTGTGAGACTGAACGCAATTTGCCCAGGCTTTGTTGATACGCCCATCCTC Gene GeneID:512259|HPGD:NM_001034419:29_cdna UTR3_Alt 4 NULL GeneID:512259 8 GENE HPGD MGC127443 PGDH hydroxyprostaglandin dehydrogenase 15-(NAD) EMBV3_08940 CATCAGATTCCAGCGACAGACCCGGCCTTTGGAGATCAGGAGCAACCTAGAATATGCCTT Gene GeneID:616591|LDOC1:NM_001081544:2_cdna Constitutive 0 NULL GeneID:616591 X GENE LDOC1 NULL leucine zipper, down-regulated in cancer 1 EMBV3_04270 TAAACCTCTGTGCCTGACATCTTACTGAAGAAGGCAGTGAAGATGACGAGTCCCTCCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07192 GTTCAAGCAGAGTTAGGCTTGGCAACTAAAGATACCAGGTAGGGATGCTAGGCCAAAGGC Gene BVT0102_150468 + 0 NULL GK000004.2:107013731-107031451 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185245 TCONS_00185246 TCONS_00185244 1 XLOC_111530 Coding TCONS_00185245 XLOC_111530 Coding Coding TRPV5 4:107030535-107062284 j TSS137755 3222 1 TCONS_00185245_2 378 0.128181253879578 15 0.898985762882701 0.000362885787232609 1.75699165688581e-169 1.80949037018412e-191 1.08716514384835e-30 1.69466685209666e-18 6.74728810057529e-06 6.15388844825875e-05 1.91955286131621e-51 7.49938857495509e-06 4.79884137095492e-09 2.31742193953792e-05 0 5.70189509163482e-126 2.69334449048091e-18 4.69924720940868e-87 0.0144464849407193 0.00459382697905255 0.0221781746171263 0.000270978620867962 1.35934383345023e-05 3.14228269745837e-116 0.00267530989251398 0.00379445233407178 0.00675592173617302 1.45439220094415e-152 0.000314517543057262 2.52778123972155e-113 0.000807793769295585 0.000413730039770688 0.00101217234753218 XM_602687.5 TRPV5 PREDICTED: Bos taurus transient receptor potential cation channel, subfamily V, member 5 (TRPV5), transcript variant X3, mRNA. 0.0 2165 100.00 0.372129112352576 NM_019841.4 TRPV5 Homo sapiens transient receptor potential cation channel, subfamily V, member 5 (TRPV5), mRNA. 0.0 1218 83.58 0.355058969584109 TCONS_00185245_2 sp|Q9NQA5|TRPV5_HUMAN TRPV5_HUMAN Transient receptor potential cation channel subfamily V member 5; 0.0 622 79.58 0.994708994708995 5 coding 1 1 1 1 0.0216285703575213 0.838554871607598 -0.024012120219535 0.715671247695037 CCATGCACGTGTACACCCTGCACAGCGCCACGCCAGATCCACTTGTGACCCATCCCTCCTCCTCGTCTCCGCTTCAGCTGCCGGCTGCATCCTAGCCCTGCTCCCTTGAACCACCTCCTCCCCGCGACTGGCCACTGCCCGGAAGGAGAAGACATGGGAGCACCTCCATCCAAGGCCAGGGGTCTCTGGATCCAGCTTCAGAAACTGCTGACCTCCTGGCTGGTGGGACAGCAAGACTGGGATCAGCGTCTGGATGAGATGTACATGCTGCAGCAGCAGAAGATTCGAGAGTCTCCTCTGCTTCGGGCAGCCAAGGACAATGACCTGTGTGTCCTGAAGAAACTTCTGCTGGACCGAAACTGTGACTTCCGGCAACGAGGGGCTGTCGGGGAGACGGCACTGCACGTGGCCGCCCTCTATGACAACCTGGAGGCCGCCATGGTGCTGATGGAGGCTGCCCCTGAGCTGGTCAAGGAGCCTGCCATCTGTGAGCCATTTGTAGGTCAGACGGCCCTGCACATAGCAGTCATGAACCGGAACGTGAACCTCGTGAAAGCCCTGCTCGCCCAAGGGGCCAGTGTCTCTGCGAGGGCTATAGGCTCCGCCTTCCGTCTCACTCCTCACAACCTCATCTACTTTGGGGAGCACCCTCTGTCCTTTGCCGCCTGCATGGGCAGCGAGGAGATTGTGAGGCTGCTCATTGAGCACGGTGCTGACATCCGGGCCCAGGACTCCCTGGGAAACACAGTGTTGCACATCCTCGTCCTCCAGCCCAACAAAACCTTTGCCTGCCAGATGTACAACCTGCTGCTGTCCTACGACAGGCGAGGGGACCACCTGCAGTCCCTGGACCTCATGCTCAATCACCAGGGCCTCACCCCCTTCAAGCTGGCCGGAGTGGAGGGCAACACTGTGATGTTCCAGCACCTGATGCAGAAGCGGAAGTACATCCAGTGGACGTGCGGGCCGCTGACCTCCACTCTCTACGACCTCACAGAGATTGACTCCTGGGGAGAAGACGTGTCCTTTCTAGAGCTTGTGGTCTCCTCCAAGAAACGGGAGGCTCGTCAGATCCTGGAGCAGACCCCAGTGAAGCAGCTGGTGAACTTCAAATGGAGAAAGTATGGGCGGCCTTACTTCTGCATCCTGGGAGCCTTGTACGTGCTCTATATGATCTGCTTCACCATGTGCTGCATCCACCGCCCTCTCAAGGCCCGTAGTGGCAACCGCACAGACTCCCGAGACATCACCGTATTCCAGCAGAAGCTGCTCCAGACATGCTGGAACTAGGAAAGGTATTAAGCAGAGAAACCAGGTCGTGATATATGCATTTGAAAAGGAGGCCTACGTGACTCAGCAGGATAAAATCCGGCTGGTGGGGGAGCTGATGACGGTCATCGGGTCAGCGATCATCCTATTCCTAGAGATCCCAGATATCTTCAGGGTCGGTTTTTCCCGCTATTTTGGACAAACTGTCCTCGGGGGGCCATTCCATGTCATCACCATCACCTATTCCTTCCTGGTGCTGGTGACCATGGTGATGCGGCTCACCAACACCAGCGGGGAGGTGGTACCCATGTCCTTCGCCCTGGTGCTGGGCTGGTGCAGCGTCATGTACTTTGCGCGAGGATTCCAGATGCTGGGCCCCTTCACCATCATGATCCAGAAGATGATTTTTGGAGACCTGTTGCGTTTCTGCTGGCTGATGGCTGTGGTTATTGTGGGATTCGCCTCAGCGTTCTATATCATTTTCCAGACAGAGGACCCGTCCGCTCTGGGGGAGTTCTACGACTATCCCATGGCGTTGTTCAGCACCTTTGAGCTTTTCCTCACCATCATTGATGGGCCCGCCAACTACGATGTGGACTTGCCCTTCATGTACAGCATCGTCTACTTTGCCTTCGCCATCATCGCCACGCTGCTTATGATCAACCTGTTGGTCGCCATGATGGGCGACACACACTGGCGGGTGGCCCATGAACAGGACGAGCTCTGGAGGGCCCAGAGTTGAGACCAACCAAGACCAGAATACTTTGCGAGCACGTCGCTACGTGGAAGCTTTCAAGGGCTCAGACAAGGAGGAAGGACAAGGGCATCCCCCTGAGAAACGGCCCTCGGTGACTGAAAGCGGGCTTCTAGCCAGAGCCTCCCTGGCCCTCCCGACCCCTTCCCTGTCCAGGACCACCTCTCGAAGCAGCGGCAGTCACCGAGGCTGGGAGATCATTCGACGCAACACCCTGGGACACGTGAATCTCGGACTGGACCTTGGGGAGGGGGATGGAGACGATCGGGTTTATCAGTTATGATCAGGACCCTTGTTACTCTCGTCCTGACTCCAGGTGGGCCTGGGTGAAGGCAGAGAGACAGAGATACTGCTTGTGAAGCATCGCCCTTCCTGCCTGTTAACCCTGTGAGGGGTGGACAGAAGAATTCTCCCAGGCCATCCATACCTCACCCATCACCTCAGCATTCCCAGGAATGAGTACCTTCTGGCTTCTTGGAAGTCTCACATCTTGGGAAAAGAGGGTATCTGTTCAAGCAGAGTTAGGCTTGGCAACTAAAGATACCAGGTAGGGATGCTAGGCCAAAGGCTGGGTCATCATGTCCTTTTCTGCCCCATGAGGTGCTAGACTGTGAGCTGTGACGTCTCCCAGGGCTTCAGGAAGCACAAGCCGGGCATGGCCCTGAGGTTGTAAGCCTCACCTCTTCCTGTACCTCATAGGACCCTCTCCCCACCTCACAGCCAAACCCACACTAGAAAACTGCAAGAAAAAAGGTTATTTATCCTCCCTTTATTTAAAAAAAAATGTATTATGATATGCAGAACATAAAATGTACCATTTTAAGCATTTTTTAGCTGTGCCGTTCAGTGGTATTAAGTACATTCACATTGTTGGGCAACCATCACCACTATTCATCTGGGGAATTTTTTAAACCGAAAATCGTATACCCATTAAACACGAACTCCCCATCATTCCTTCCGCATGGTCCCTGAAACCAATATCCTACTTTCTGTCTATGATTTTAAGTTTTCTGGTTACCTCGTATAAGTGGAATTATCCAACATTAGTCCCATTGTGCCTGGCTTATTTGATGTAACATAAGGTTTTCAAGATTCATCCATGCTATAGTGTGAGTCGGAATTTCATTCCTTTGAAAGGCAAATATAATAACATCTCATTGTATGTTTAGATCACTTTGTGTTTATCCATCCCTCCACTG EMBV3_22821 CTCCCTGCCAGTGGGGAGGGCAGACTGTGCACATTTCACTAGAGTCCAAATACAGAAGAA Gene GeneID:539611|RNF26:XM_002693026:245_cdna Constitutive 0 NULL GeneID:539611 15 GENE RNF26 NULL ring finger protein 26 EMBV3_00311 AGAAGGGCCACCTGAAAGAGACTTCTGCCACATCGAAGCAAGGAAGCTACAGGCATCTGA Gene BVT0102_041260 + 0 NULL GK000011.2:9234204-9240934 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026838 TCONS_00026835 TCONS_00026836 TCONS_00026837 1 XLOC_015122 NonCoding TCONS_00026837 XLOC_015122 NonCoding NonCoding LOC100848208 11:9239119-9240889 = TSS19168 734 1 TCONS_00026837_1 60 0.113079019073569 3 0.586772187676653 0.00401931989858183 0.00210374615296152 0.00282342566441842 0.0014120846828 0.000976358897468888 0.00078653151687932 0.000718490255285803 0.000641352423857376 0.00194465973274989 0.00386663021730438 0.000144554208242185 0.00117710899272517 4.89123518632228e-05 7.82675380069247e-05 0.000828215630940865 0.00672716590462517 0.00393457496695758 0.00409021236911524 0.00275417802698981 0.00615795975350563 0.000968037794622309 0.000998233256782716 0.00259717905437072 0.000894211744366069 0.00111561238514258 0.00217162080785696 0.00206855439630395 0.00283061123227733 0.00129747131527729 0.00272194101123796 XR_138795.2 LOC100848208 PREDICTED: Bos taurus uncharacterized LOC100848208 (LOC100848208), 0.0 1240 97.00 0.998637602179837 XR_133305.2 LOC100506473 PREDICTED: Homo sapiens uncharacterized LOC100506473 (LOC100506473), misc_RNA. 3e-18 96.9 84.85 0.129427792915531 0 noncoding 1 0 0 0 -1.31046467977387 0.0841346517327776 0.00356105156685395 0.941961843881731 GTCACTCTGTATGTGCCGCGCGTCGCGCTCCGCCTCTCCGGGAAGGCTAGGATGCTGGGCGGGCTCTAACCGGGGAATATCCCCGGAGGCATAAAGAAGTGAAAGAGCTCGCTGCAGAGGAAACTGGCGTTTCCAGTCTGGCAGGAAGAGAGGAAAAGGCGAAGTTCACGAGCCACGATTGGTCGCGCCTGGTCGCGCCTCCTATGACGTCAGAGACAGAAACCAATGGGAGTCCAAGGGCAGCCTCGCGGGAAGACGGCAAGGGAGGCCGGTAGAAGTTAGTGTAAATATGGACTTAACCTGATGTCTCAAGCTCTTCATCAGCAAAAACGTTTTATGGCAGGTGCTGTTTTGAACGTGTACAGGCAGAAGGGCCACCTGAAAGAGACTTCTGCCACATCGAAGCAAGGAAGCTACAGGCATCTGACTTGCAAGCCGGGCAGACACCATGATTGGAGGCTTCAAGCCAGGCTTGTCAGCACCTAAACCACAAGACTGAAAACCAAACCCCAGAATGGACAAAGAGCGCCTCTGAATTCGTGCGGGACCAGAGATTTGAGGACCAGACATCTCCTGTTTCTCCTTGTCCTGGCACCTTACACATTCCCTAACCAGACACAGCCCTGAGGAAGAGCGCTGGCCTCCTGTGATAAGATTATTGTCACTGGCAGCTAAGTGGGGCTTAAAGTAGAAATAAAGTTCAGTTACAGAAAAAAAGTTCCATTTGTTCCACA EMBV3_41618 TCACTGAACTGCCTGAACAACAGTCCACCCTTTGTCTAACATTCTTTTCACTGCCTGGCC Gene GeneID:280855|MET:NM_001012999:9_cdna Constitutive 0 NULL GeneID:280855 4 GENE MET HGFR MGC166072 c-met met proto-oncogene (hepatocyte growth factor receptor) EMBV3_19646 GTGGCGTCTGCTGCTTCCAGGCGATTTGAGGGAACCCCTGAAGTCTCGATTCAGTTGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13848 AATCCTGTACCAAGGCAAGCATTTCCACATTCCCACCATGGAAAACGGGCCCCAGCTCAT Gene GeneID:281643|BCAT2:NM_001013593:38_cdna UTR3_Alt 2 NULL GeneID:281643 18 GENE BCAT2 MGC137404 branched chain aminotransferase 2, mitochondrial EMBV3_07614 GTCTGCACACTGCTTGTCTTGGCCTCTTGGCTGGCTTCATTCTTAATCCATTTTCCCCCC Gene GeneID:787913|LOC787913:XM_002687601:698_cdna Constitutive 0 NULL GeneID:787913 5 GENE LOC787913 NULL similar to olfactory receptor, family 6, subfamily C, member 1 EMBV3_25433 GCTATCACCAAGGTAGAAACCACCTGTCTTATGAGCTATCGGCTAAAATTCTGGATGACC Gene GeneID:613984|VAMP7:NM_001076302:2_cdna Constitutive 0 NULL GeneID:613984 13 GENE VAMP7 SYBL1 vesicle-associated membrane protein 7 EMBV3_13174 CCTATGTGGTCAAATTTCTCAGTACAACAAAGATGTGCCTTATCCTCCTCCACTACCCCC Gene GeneID:506263|PTGR2:NM_001075249:55_cdna Constitutive 0 NULL GeneID:506263 10 GENE PTGR2 MGC134348 ZADH1 prostaglandin reductase 2 EMBV3_38657 GTCCGACGTGGACCAGCGCTGCCTGGACAGGCCTATGCCATCAATGGGAAGATTTCTCCC Variant GeneID:514636|C25H16ORF13:NM_001038106:165_cdna 379^601 7 EMBV3_19511 GeneID:514636 25 GENE C25H16ORF13 MGC134534 chromosome 16 open reading frame 13 ortholog EMBV3_33176 GCAGGTCCTACAGCTCTGCTGGCTCATGAAATAGGTTTTGGAAGCAAAGTTACAACACAC Gene GeneID:511268|PARK7:NM_001015572:55_cdna Constitutive 1 NULL GeneID:511268 16 GENE PARK7 DJ-1 DJ1 Parkinson disease (autosomal recessive, early onset) 7 EMBV3_19264 TCTACCCAGCTACCACTGGCAGGAACTTTGATGAGCCAGAGGATGCCAGCTGTCCATCAT Variant GeneID:282438|PRDX6:NM_174643:22_cdna 509^752 4 EMBV3_03401 GeneID:282438 16 GENE PRDX6 AOP2 KIAA0106 peroxiredoxin 6 EMBV3_13418 GAAAACGAAGATGACATCCAGTTTGTGAGTCAAACGTGTGGACGTCTCATACCGACTGGA Variant GeneID:100140623|LOC100140623:XM_002697191:257_cdna 487^580 1 EMBV3_17942 GeneID:100140623 23 GENE LOC100140623 NULL hypothetical protein LOC100140623 EMBV3_13112 GGTTGGACAGTATAAACAACAAGGAACATAAGCGGTCAGAGTGACCCAGGGGAAATGGCC Gene BVV0102_160419 + 1 EMBV3_18003 GK000010.2:97457684-98290771 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015479 TCONS_00015477 TCONS_00015478 1 XLOC_008491 NonCoding TCONS_00015478 XLOC_008491 NonCoding NonCoding - 10:98235616-98265948 - TSS10913 1158 2 TCONS_00015478_1 42 0.132987910189983 2 0.961887178134582 0 0 0 0 0 0 0 0 0 0 0 0 0 9.54877903095951e-05 2.31380185511173e-19 0 0 2.1667423444356e-05 0 0 0 0 0 0.000535626818319401 0 0 0 0 0 0 XM_003582749.2 FLRT2 PREDICTED: Bos taurus fibronectin leucine rich transmembrane protein 2 (FLRT2), transcript variant X1, mRNA. 2e-28 131 100.00 0.0613126079447323 XR_248023.1 LOC100506718 PREDICTED: Homo sapiens uncharacterized LOC100506718 (LOC100506718), transcript variant X2, misc_RNA. 3e-84 316 78.70 0.33160621761658 0 noncoding 0 0 1 1 0.0494712284353054 0.631711356795825 0.010588620311011 0.827604460558784 GATTTGGGGAAGGACGCGGCGCCGAGCGGAATTCCTACCGGGGCCGCCAGGAGACCTCCAAAACCTTCGCAGGTCATTGGAGCAGCTACTGAACAACTGGGGAAGAGTGTTCATGGGAAGAAAGGTATTGTCTCCTTCTGAAAGTTCTGCACAGCTGGCCAGCTTGTTGAGTCCCACTGACTCAGGTCTCCAAAGGGATATTTCTGAAATGCAAGCCAAAGGAAATTGGAATGTAACGTAAATAAGGTAAATATTTAATGTGATTCCTGGACTTGCCACGGAGGATGTGTGGCAGTTGGCATCAAGAGGACTGAGTTTGAGTGCAATCTCGACCATCTTTTGGCTGGGAGGCAGATTATTGGCTTTCTGGAAATCCAGTCTCCTCCTCTGTAAACTGACATTAATAATACCAAGTCACGCCTTGTTCTGAGAGTCAGATGAGGTGATACAAGGATCTGAGAGAGGGAGTAAATGGGTATATAATGTCAGCTACTTGAGGCTAGTTCCCAACTCCCGTCCTTTCTCCACCTTTTTTCTAAATCAAGATACAGGCTCTCTAATTTATTTCACAATTATCATAATGATTGTGATACTTATAGGCATCAATTATTTTCCTGTTCTTTAGGACATTCTTTGGGCAACAACAGGTCAATAACAGGAAAGAATGCCATCACATGATTGCGTCATGTTCTTCAAAATGAAATCTATTGAAGGTTGGACAGTATAAACAACAAGGAACATAAGCGGTCAGAGTGACCCAGGGGAAATGGCCCAATGAAATTAAACAAAGGAAATGTTATACTGTGAGGAAAAATCAATGGATTGTAATAGAACCCGGCAAGAAGAGACAAAGCTCTTGAGTCCCAGAGACCCAGAGGTGATTGAGAAGGGGTGTGTGGACTAGAACTCCGGCTTCTTGTTTTGCTTTTTGAAGGCTGTTTCCACTGTGTTAAGTATAAAGATAAATAATAAAGACATGTTAATTTGTTTTCTTTTTCTTAAGTGAGTTTCGATAGCTTGATGCATCTATAGGACATCAGGTCCTTAAGAGAAACACCTGCCATTGTTTTTGAGAATTATGGTTTTCTGGACACTGTTGCCTTACTTAATGTATCTACCACAGAAGCTTCATGAAATATGGATTATCACAGTTACACC TCONS_00015482 s 5' 66111 TCONS_00015482 s 5' 96442 EMBV3_37178 TATGTCATCATGGGCTTCTTCCCCGCCCTGGTCGTCCTTTCCATGGTTCAAGTGCAAGAA Gene GeneID:525334|MMD2:NM_001075870:230_cdna Constitutive 0 NULL GeneID:525334 25 GENE MMD2 NULL monocyte to macrophage differentiation-associated 2 EMBV3_13247 GATATCTTACAGGATCTAAAGTTGGAGCCTGTTTGGCGAGGTTTCCATCAGTGCAAGAGA Variant GeneID:618101|IQCA1:XM_002686568:17_cdna 620^931 1 EMBV3_26273 GeneID:618101 3 GENE IQCA1 IQCA IQ motif containing with AAA domain 1 EMBV3_42450 ATGGGACCATTAGAGTGGGCCCTAATCTGGTAGGACTGGTGTCCTTATAAGAGGAAGCTG Gene BVV0102_259970 + 0 NULL GK000008.2:105535714-105724858 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226594 1 XLOC_138044 Coding TCONS_00226594 XLOC_138044 NonCoding Coding - 8:105566734-105593086 - TSS169380 593 1 TCONS_00226594_1 40 0.833052276559865 2 0.977572008652423 0.000141671795331853 4.73544110555056e-70 0.000168272746222965 3.92759740450947e-215 2.81604087300581e-159 8.4450003737947e-05 4.32898136140379e-05 0.000285048250832993 3.15944993900162e-63 8.55681165461579e-214 7.77611846016219e-06 7.2463425238125e-296 4.8385964231818e-06 5.55277678644713e-05 1.41905086390973e-29 3.1440518961122e-128 6.22695260676727e-159 0.00017277472746883 0.000161586024289097 1.48432847087107e-118 3.29329803234594e-16 6.81154829851844e-61 1.85894439278039e-154 0.000113083588111964 0 8.97681045806933e-05 0 0.000237812385647736 0.000413787244883187 2.55908522626928e-05 XR_231980.1 LOC101907680 PREDICTED: Bos taurus uncharacterized LOC101907680 (LOC101907680), 3e-94 349 100.00 0.323777403035413 NR_046621.1 KCNQ5-AS1 Homo sapiens KCNQ5 antisense RNA 1 (KCNQ5-AS1), non-coding RNA. 2e-27 127 70.74 0.489038785834739 0 noncoding 0 0 0 0 -0.0340274733139833 0.825518129324868 0.0390827092991484 0.411944315435701 CACGGCTCATAGCCGCCATCTTGAATTGCAGTGCCGTGTGCAGTCCTAATAAACGCGGCCCCGAGCTGCAGTGTCGGCTGCCGCCATGGTTTCTCACTAAGAACTCTGCTGTGAAGTGCCCGGTGGAGGCCTCTGTTAGTGGTAGCCTGTGAGAAAGTAAAGCTCCATGAAGCGCAAAGGAAAAGGAAAAAAGGGTCCCAGCACCTGCCTGCTACAATTCGGCTGTGACACGGAGAACTGTGGGGGCACCTTGGTTTCCCCTGCAGCTGATGCCAAGAAGAAGAAATGAGAAGTTGTTTTCCCCCAAATTTATATGTTAAAGTGCTAACCCCCAAGCCCTTGGATTGTGACTGTATTTGGAGATAAAGTCTTTAAAAATATAATGAAGTTAAAATGGGACCATTAGAGTGGGCCCTAATCTGGTAGGACTGGTGTCCTTATAAGAGGAAGCTGGGACTCAGACAGGTACGGAGGAAAGACCATGTGAAGATAGGGAGCGGACGGCCGTCGACAAGCTGAGAAACCAGCCCTATTGACGCCTGATTTTGGACTGCTAGCCTCTAGAATTGTGAGAAAATAAATTTCTGCTGTTT TCONS_00229016 r 5' 4491 TCONS_00229016 r 5' 4491 EMBV3_27912 AAGCATGAAGGGTGTCCCTAAAACCCAGAGCAGAAGCTCGAGTGAAGCTGGAGAAGTCAC Gene BVV0102_331067 - 1 EMBV3_15636 GK000024.2:42628183-42637328 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37828 TGTGAAATCGTGGAAGAGCTTTAGGATCCTAGTGGATGGAAACTGAATGTTCAGGCCCAC Gene GeneID:507367|PDK4:NM_001101883:27_cdna UTR3_Alt 2 NULL GeneID:507367 4 GENE PDK4 MGC166250 pyruvate dehydrogenase kinase, isozyme 4 EMBV3_30669 GACTCTGTGCTGAAGACAGCATCCCCACCGTTGTACAGCTCATACTCATAAATACTGCCG Gene GeneID:504372|TMEM130:NM_001083369:71_cdna Constitutive 0 NULL GeneID:504372 25 GENE TMEM130 MGC148717 transmembrane protein 130 EMBV3_27455 CAAGAAGTTGGAGGACAACCCCAAGTCCCTGAAGTCCGGTGATGCAGCCATTGTGGAGAT Gene GeneID:515233|EEF1A2:NM_001037464:1084_cdna Constitutive 0 NULL GeneID:515233 13 GENE EEF1A2 MGC128473 eukaryotic translation elongation factor 1 alpha 2 EMBV3_29047 GCTCTTGGAAATGAAGATGGATACATCACACATAAATTTCTGTCGAAGGTTTGCCAGAAG Gene GeneID:100296226|LOC100296226:XM_002697779:346_cdna Constitutive 1 NULL GeneID:100296226 24 GENE LOC100296226 NULL similar to phorbol-12-myristate-13-acetate-induced protein 1 EMBV3_19466 CAGCCAACCTCAACCAGAGTTTGCCTACTGAAAATATATGCAGCGAAGGGTATTGCTGGG Gene GeneID:506958|PQLC3:NM_001101878:72_cdna UTR3_Alt 2 NULL GeneID:506958 11 GENE PQLC3 MGC148919 PQ loop repeat containing 3 EMBV3_15913 CAACTTGAATTTCTGTCCTGCTGCTACTGGCAAAACAGGGGGTATGGATGAGGGGGAGGT Gene GeneID:100190912|LOC100190912:XR_082725:275_cdna Constitutive 0 NULL GeneID:100190912 26 GENE LOC100190912 NULL hypothetical LOC100190912 EMBV3_21209 GACACCTTTATAATTATGTAATGTCCTTCTCTATCCCTTGTACTGTTTTGAGTTGAAGTC Gene BVV0102_389331 + 0 NULL GK000003.2:41266929-41420908 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30032 AAGTACTTGTGAAGTAACATCTTTCTTGTGCATTTTCAACACTCGTAAACTGGAAATCAG Gene BVV0102_200292 + 0 NULL GK000014.2:36126598-36385094 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053233 TCONS_00053236 TCONS_00053235 TCONS_00053234 1 XLOC_031683 Coding TCONS_00053236 XLOC_031683 Coding Coding TRAM1 14:36383710-36417493 = TSS39326 2816 1 TCONS_00053236_3 374 11 0.916967615890119 0.00105476345564768 0.00126289322926452 0.000783601253544322 0.0007907626623564 0.00113545492473402 1.83189452983855e-05 0.000911844059103651 0.001196568406335 0.0016326755400247 0.000284476513120932 3.7027066999958e-09 6.5324992292803e-07 0.000216036981891911 0.000277807203334033 0.000357166255741711 0.0140977600242136 0.00766982366609292 0.00773955478327023 0.000752103134000977 0.00226330243812048 0.00128363933983488 0.00454673835503758 0.00520927956400617 0.00729807325526571 0.00178452398276925 0.0010138237809142 0.00107297677665267 0.000380421828263312 0.000585936856544621 0.000920661453677159 XM_005215508.1 TRAM1 PREDICTED: Bos taurus translocation associated membrane protein 1 (TRAM1), transcript variant X1, mRNA. 0.0 5056 99.89 0.998224431818182 NM_014294.5 TRAM1 Homo sapiens translocation associated membrane protein 1 (TRAM1), 0.0 3591 88.07 0.999289772727273 TCONS_00053236_3 sp|Q9GKZ4|TRAM1_BOVIN TRAM1_BOVIN Translocating chain-associated membrane protein 1; 0.0 772 99.73 0.997326203208556 2 coding 0 0 0 0 0.0499545258678948 0.814118379700011 0.00808927462451982 0.887946185918849 TTTTTTTTTTTTTTTTCGGGTGGCCCAGGCGGCTGCGTACTGGCTGTGGGATGGGAAGTGAAGCCCCAGCGAGCGGCAGCGGCGGGGCTGTGAGGTGCAGCCAGAGGGAGGCGGCGGCGGCGGCGGCGGAGAGTCGGTGAGCAGCTGGGAAAGCGGAGCCGGGGCGGAGCACCTGCAGGCACGGGCGGCGGCTTCACCATGGCGATTCGCAAGAAGAGCAGCAAGAACCCCCCGGTCCTGAGCCACGAATTCGTCCTGCAGAATCACGCGGACATCGTCTCCTGTGTGGCGATGGTCTTCCTGCTGGGGCTCATGTTCGAGATAACAGCAAAAGTTTCTATCATTTTTGTTACTCTTCAGTACAATGTTACCCTCCCTGCCACAGAAGAACAAGCTACTGAATCAGCGTTCCTTTATTACTATGGTATCAAAGATTTGGCTACAGTTTTCTTCTACATGCTAGTGGCGATAATTATTCATGCCATAATTCAAGAATATGTGTTGGATAAAATTAACAGGCGAATGCATTTCTCCAAAACGAAACACAGCAAGTTTAATGAATCTGGTCAGCTTAGTGCATTCTACCTGTTTTCTTGTATTTGGGGCACATTCATTCTCGTATCTGAAAACTACATCTCAGACCCGACTATTTTGTGGAGGGCTTATCCCCATAACCTGATGACATTTCAGATGAAGTTTTTCTACATATCACAGTTGGCATACTGGTTTCATGCTTTTCCTGAACTCTACTTCCAGAAAACCAAAAAAGAAGATATTCCTCGTCAGCTCGTCTACATCGGCCTTTACCTCTTTCACATTGCTGGAGCTTACCTTTTAAACTTGAATCATCTAGGACTTGTGCTTTTGGTGCTACACTATTTTGTCGAGTTTCTTTTCCACATTTCCCGCCTATTTTACTTTAGTGACGAAAAGTATCAGAAAGGATTTTCTCTGTGGGCAGTTCTGTTTGTTTTGGGAAGACTTCTGACTTTAATTCTCTCGGTACTCACTGTTGGCTTTGGCCTAGCAAGAGCAGAGAACCAGAAGCTGGATTTCAGTACTGGAAACTTCAATGTGTTAGCTGTTAGAATTGCTGTTCTGGCATCCATTTGCATTACCCAAGCATTCATGATGTGGAAGTTCATTAATTTTCAGCTTCGAAGGTGGAGAGAACATTCTGCTTTTCAGGCACCAGCTGTGAAGAAGAAGCCACCAGTGACTAAAGGCAGGTCTTCTAGAAAAGGAACAGAAAATGGTGTCAATGGAACAGTAACTTCAAATGGAGCAGACTCTCCCCGTAATAGAAAAGAGAAATCTTCATAATGAATTATAATCTAATTGATTAATGTCCCCAAAGAAATCTGCTTTTTACTATATCTTTCAGCACTAGAGATTGTTTTCTGTTCCTGAAAATACATTTTCTGCTCTTTGATTCTTGCTACTATTGTATTATTTCATGCATTTTTTAAAAGGGCATTTGAGGGGAGGATGATTCCTATGAGTGAAAAAAATGTTTTAGCTTAGTCTAAGCTACCTGCCTTCAAAATAGTGTAGGGACCACCATCATATTATATTTTATTTTATTTTGTTTTTTATCTTTAAGCATTTTTCTAATGATTTGAAGAGATAACTATTTACAAAAATTATACATATCAGTGATAACAATTTCTTGCTCTCACCAATTTTTTATATTAAGCAAGATGGCCTGTTCCAGCAGGGTCATATTTTTTAAGTTATCTTTCAGGGCAAAATGGAAATAATATAAAGTTGGATGTCAAATTTTAATATGTTTTCAGTGTTCTCTAATTTTTAGGAATTTTTGTAGCCTTTACACTTGGGAAAAAAGATTTGTAAATTCACCAAAATACTTGTGTGCTTTATTTTATAGTGATTGGTAATGTTACATCCCCATTTTTTTTAAGGAAAAAACATACTCTTGGTTACGATGTGTGGAGATATATTGCCATGTATATTGAATCAAAATATCTTAACATAAAAGTACTTGTGAAGTAATATCTTTCTTGTGCATTTTCAACACTTGTAAACTGGAAATCAGAAATTAAATGTTTCCTATAGAGAAGAAAATTTGACCATAGCCCTTTTTGATATGTTTATTAAATAATGATTCTTAATGGGGCTTGTCATAAGTTTGATATGCACAGGATCTTAGAAAAATACTGTTTAACCTGAAAACCCTTTTAAAAAATAATGCCTACTTGATTTATATACATGAAAAGGATGTCAATATTTGGAAAATATTTAATGCACTAACCTCAAATTGAAAATTCAGGTGGATAAATAGTCTTATAAAAGACAGTGCTTTATGTTATAACTGTAGCTTTGGTTCCATCCTTATTTGAGAAACCATTTATCTGTATAAAACATATTTTTGGATAAATATATATATATATATATTTGTATCTCTACAGAAAGGCTCTAAAAAACATTTGAGTAAAATATTTGGTTCCCTTTTCTATAATTATCCTTTCAAATCTTTATAGCTGTCCTTGGGTTTTTGTCATCTTTACAATGTTCACATCTGGCTCCCCACTTCTCACTTCTGTCACCAGCTAATGTTTGCGCCATTTTTAGTATAAAAGTTGCAGACCTGGTCGCTCTGCAGTTTAATGAGTTGCCATGCTGCTAGAAAGTGCTTTCTGTTTCCAGCTGTTTACCTACTTCCTGGAAAAAGTAGTAGCTCTCTGTAGCATCATGGAGTTTCCGTGGAACCAAATCTCTGCCATTGAAAACCGGCCTTATATTGAACTATACGTTAAGAAATCAATCAGAATAAAAATTTTTACTTTCACAAGCTG EMBV3_09166 GCAGAAGGCCCCTGAAACTCTATGTCTTCCCATCTGTCAGTGAACTCAGTAAACAGTGTG Gene BVT0102_039906 - 1 EMBV3_38191 GK000001.2:66972769-67036725 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17667 GAAAGCTTCTCTGAGATGGGAACGGAGTGGGGTCCCGGGATCTGGCCTGTGGACCGAGGA Gene GeneID:526369|LENG9:XM_002695422:82_cdna Constitutive 0 NULL GeneID:526369 18 GENE LENG9 NULL leukocyte receptor cluster (LRC) member 9 EMBV3_29985 CTCCACCGTGCCCTTTGAGTCAGGGCGGAAACCAGATACTGAAGAGACTAGCAAACAGAA Gene BVT0101_022729 + 0 NULL GK000028.2:17415701-17482550 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071418 TCONS_00115686 TCONS_00251707 TCONS_00130084 TCONS_00039226 TCONS_00129783 TCONS_00233372 TCONS_00064812 TCONS_00079609 TCONS_00071186 TCONS_00148672 TCONS_00116100 TCONS_00080603 TCONS_00020157 TCONS_00078719 TCONS_00129573 TCONS_00063486 TCONS_00063080 TCONS_00200574 TCONS_00209711 TCONS_00175855 TCONS_00218945 TCONS_00252107 TCONS_00010471 TCONS_00021595 TCONS_00008224 TCONS_00115865 TCONS_00135686 TCONS_00056146 TCONS_00161097 TCONS_00089437 TCONS_00208264 TCONS_00161835 TCONS_00020400 TCONS_00010053 TCONS_00107179 TCONS_00198813 TCONS_00170823 TCONS_00238307 TCONS_00116665 TCONS_00039951 TCONS_00131137 TCONS_00090421 TCONS_00122313 TCONS_00021878 TCONS_00238933 TCONS_00251907 TCONS_00063181 TCONS_00199037 TCONS_00111497 TCONS_00218898 TCONS_00079498 TCONS_00209636 TCONS_00122282 TCONS_00031910 TCONS_00251929 56 XLOC_043189 XLOC_069855 XLOC_154648 XLOC_078795 XLOC_023044 XLOC_078496 XLOC_142854 XLOC_039536 XLOC_048494 XLOC_042958 XLOC_090552 XLOC_070269 XLOC_049487 XLOC_010835 XLOC_047607 XLOC_078286 XLOC_038213 XLOC_037807 XLOC_122226 XLOC_128222 XLOC_105634 XLOC_132264 XLOC_155048 XLOC_006022 XLOC_012268 XLOC_003782 XLOC_070034 XLOC_081909 XLOC_033949 XLOC_097989 XLOC_054222 XLOC_126777 XLOC_098720 XLOC_011077 XLOC_005605 XLOC_063090 XLOC_120466 XLOC_103665 XLOC_144974 XLOC_070831 XLOC_023768 XLOC_079842 XLOC_055202 XLOC_073868 XLOC_012551 XLOC_145599 XLOC_154848 XLOC_037908 XLOC_120690 XLOC_067397 XLOC_132217 XLOC_048383 XLOC_128147 XLOC_073837 XLOC_018155 XLOC_154870 NonCoding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_25059 CATGAAAAGGACATCAGCAAACAGGATCAGTTAACTATTGCATTTATATCTACCGTAGGC Gene GeneID:280904|PTN:NM_173955:553_cdna Constitutive 0 NULL GeneID:280904 4 GENE PTN NULL pleiotrophin EMBV3_41128 GCAGGGGGATGGGGAGGGTTGAAGAGATAGAGCCTTGGGATGATGGAAAAAGGAGTATCA Gene GeneID:527518|CYB561D1:NM_001105398:131_cdna Constitutive 0 NULL GeneID:527518 3 GENE CYB561D1 MGC151588 cytochrome b-561 domain containing 1 EMBV3_03342 TCACCAGCAACGGTCCTTCTGAACGCTCCATGAGACTGGGCTGATTTCAGGAGACTTTAA Gene BVT0102_140460 + 0 NULL GK000017.2:74698469-74708495 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081983 1 XLOC_050860 NonCoding TCONS_00081983 XLOC_050860 NonCoding NonCoding - 17:74705942-74706990 - TSS61923 1048 0.21087786259542 1 0 0 0 0 0 0 0 0 0 0 5.88906165104603e-05 0 2.38833903144349e-05 0 0 8.6607631762817e-05 2.52018691054197e-05 0 0 0 6.86205255432605e-06 0 1.41615731148939e-05 0 0 0 0 0 5.49914523784667e-05 4.63225953854291e-06 0 0 noncoding 0 0 0 0 GTGACCTCTACACACACAGCAAACCTCACGGACTCCTGTAGCTCGCCTCAGCTGAAGACGGCCTTCCAAGTCTGGGCACGGGGTCAAACGGCAGGGTCGGATCTCACCAAAGTGCAGAAGGTGGAGTCAAAAGCCCAAGAATTCAGTTAATAAACGATGATGTCTTGAACCCGCTCTGACCCCACGTTCAAAGCTCCTTTCTGTGACATGACTTCAAGATTTAACTCACCTCCTTAGCACAGTGGTTCTCAACTGGGGGTTCTGACCTGGCCAACAGGGAGCATCAGCAATGTCTGGAGACAGGTTCTATCGTCACAAGTGGGTGATGTCTGTGTGTGTCAGCGTGTGAAGGCGCTCCAGGGCAGAAGCCAGGGCTGCCGCTAACTCCCTACAACACACGGGCTGGTCTCCACGCAGTCACGTGCCCCGAAACGTCAGCAGTGCTGGGACGGAGAAAGCCTCCCCTGGAGGCAAGGCCTAACCATCTCAGCAGCCCGGAGACAGACGGGCGAGCACACTTGCGCCCGGCAGGCGCTCGCCCGCTCGGCCCGGCAGGCGCCCGGCAGACGCTCGCCCACTCTGCCACCAGGCCCTGCCGCGCGGAAAACGCAGGCTCGCTGCGCCTTCCCTCCCTGGGCTCTGAGAGCTCAGAAACACTACGTTCAAGCTGCATCATCAGTCAGGAGACGGAGTGCAAAGTCAGGAAACCAGAAAGGCTGTGACATACTCTCCAGAGTACCTCGATCTCTTTGGTTTGTAAACTGAAGTTAGGGTGGCTTAGCTGGCCACCACCCGCCACTGGGATTCCGAGCAGCTCCCGCCTCACCAGTCCTTACAGGATGGCGCGGGCATGGTCCAGACTGTCAGTCAGCCTGTGCTTCAGGAGAGCTGTCGTTCACCAGCAACGGTCCTTCTGAACGCTCCATGAGACTGGGCTGATTTCAGGAGACTTTAAAAGAAAGGAGATTCGACAAAGAACAGGTCTAAAAGAGTCTCAATTTCTTCTATGGTTATCTCCTAGGTTTCTAACGCACTTCAGACTCTGGGG TCONS_00078387 . 3' 4460 TCONS_00078387 . 3' 5507 EMBV3_06796 TGGGTCTTTATTGCTTTGCGGGCTTTCTCTGGCTGTGGTGAGCCAGGGCTGCTCTCTATT Gene BVT0102_025757 + 0 NULL GK000009.2:93261964-93373744 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236300 TCONS_00236301 1 XLOC_144429 NonCoding TCONS_00236300 XLOC_144429 NonCoding NonCoding - 9:93307794-93321263 - TSS176916 700 2 TCONS_00236300_3 57 0.664285714285714 2 0.948173448173448 3.88735365068272e-05 0 0.000429649731906202 0.000818551380691444 7.05311990737745e-06 0 7.048391658766e-11 9.13703450385215e-05 1.12716181563331e-05 0 0 0 3.56523566907797e-10 0 0 0 0 0 0 0 0 0 0 0 9.8978269067602e-06 2.01298413190053e-05 0 0 0 0 XM_005221819.1 C21H15orf40 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf40 (C21H15orf40), transcript variant X1, mRNA. 6e-59 232 87.05 0.272857142857143 0 noncoding 0 0 0 0 0.0297549197752045 0.832958538602662 0.0335662600021711 0.57096780210584 AGGCGGGGCCTGGGCCTGAACGAGGAGGGGCGGACCCAAGGATTGGTGAATGAAGTTCACCTGGTGGAGGATTTGTTTTGAGTTTGACTCCAAAGTGAAAGTCGCTTAGTCGTATCCGACTCTTTGCGATCCCATGGACTGCACAGTCCGTGGAATTCTCCAGGCCAGAATACTGGACTGGGTAGCTGTTCCCTTCTCCAGGGGATCTTCGCAACCCAGGGATCGAACCCAGGTCTTCCGCTTGGCGGGCGGATTCCTTATCAGCTGAGCCGCAGGGAAGCCCCACCTGGCAGATGGGCGGTCCTAAAAGCGCCTCTGTGGAGGGTTACGGGATAGCAGGAACAATTCATCCGCGAGAATGAAATTTGCCTTTTTCAAAAGGCTTCTCTGGGAGGTGGAGCTCAGCGGTTGCTCATGGGTGGCTCCAAGGTACAGAGATCGCCTGCCGATGTGGGAGACACCGGTTTGATCCCTGGTCAGGGAAGATCCCACATGCCTGCCTCAGAGCAAACAAGCCCATGTGCCACAACTACTGAGCCTGTGCTCCAGAGCCGGGGAACTGCAGCTACTGAAGTCCACGCACCCTAGAGCCTGTGCTCCACAGCGAAGGAACCACCGCAGTGAGAAGCCCCGGCACTGCAATAGAGAGCAGCCCTGGCTCACCACAGCCAGAGAAAGCCCGCAAAGCAATAAAGACCCA TCONS_00238076 r 5' 88 TCONS_00238076 r 5' 88 EMBV3_30652 CAAGGCATGTCCAACCAAGGGCAAGAGAACACTTAGGAAGCCCCAGAGAATCCCATCCAT Gene GeneID:539169|GAS2L2:XM_002695628:35_cdna Constitutive 0 NULL GeneID:539169 19 GENE GAS2L2 NULL growth arrest-specific 2 like 2 EMBV3_19534 ATTGACAACTGTGAACCACCAGCTGCCTGGAAACCTCACTTCAGGAAACCTGCTCCCGAA Gene BVT0102_144391 + 0 NULL GK000001.2:123444004-125733498 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26352 ATGATCCGACACCAGACTACATGAACCTGCTCGGCATGATCTTCAGCATGTGCGGCCTCA Gene GeneID:508733|C7H19orf56:NM_001046010:32_cdna Constitutive 1 NULL GeneID:508733 7 GENE C7H19orf56 C19orf56 MGC137067 chromosome 19 open reading frame 56 ortholog EMBV3_07308 GACTGGCCATCTCTGATTCCCTTCTTCCTTTTGACCTTCAACCTCATCCTACCCAGGGAG Gene BVV0102_087604 + 0 NULL GK000004.2:71755147-72068353 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188601 1 XLOC_114642 NonCoding TCONS_00188601 XLOC_114642 NonCoding NonCoding - 4:71756715-71760069 - TSS140969 3354 4 TCONS_00188601_3 73 0.035778175313059 1 0 0.00317627631530266 0.00484445624876966 0.00382686287106007 0.00197576324948959 0.00218007643985131 0.00159886842159525 0.00211777676603065 0.00167707067334996 0.00158085043358249 0.000620731729924301 0.00025321626060606 0.000132195756682324 0.00208224180586546 0.00162128899758227 0.000816234947618924 0.00016536763924776 9.89998639837131e-06 0 0.00236252324118922 0.00538606161242701 0.0014246361490516 0 0 0 0.0045012296749549 0.00334943298235474 0.00296976070085989 7.73224918865265e-05 4.77644880229319e-05 6.99098264475071e-05 NM_174963.3 ST3GAL3 Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (ST3GAL3), transcript variant 1, mRNA. 4e-06 59.0 80.65 0.0181872391174717 0 noncoding NNCCTTCACACACACGCCCCTGGTTCTGATGTGTATTTGGCAGGTTCTACAGCGCTGACGAGGTCCTTCATATTCTCCCAGCCCAACCAGGGTGATTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGAACTGGGATAAGTGTCCGGGTGTGCAGATGACACATTTTGACAGGAGTGCAGATTTAATTTTTCAGCTGAACTGAGCAACGCAGTGCAGCAGAGGCTCGGTTTAGAAAAACACAGCGAGGCAATCAGAACTTCCAATTCCTTTAATATCTATCTAATCCCGAGAGATCTGTGAACCCTGGAACCTGTGATGGGGGCTTTTGGCAAAGCTGTTGTGTTCCTCCTGAAACTGAAGAAACCGTGATCATGGTATTTACATTTTACAAAATGTTTACTGCAGTCTTTTCAAACTGTGTATGTAGAAAGTGCAAGTAAAACTTAGCAAGGGAGGAACATCACATCAGGGGGCTTCCTCCCTGCAGTCTTTCCTGGCTCCTCTTGGGCACAGTTGCACTGAACTGCGCAAACAGGCATTTGATAAATGTTTGCAACACGGCCCTGTGGATTCAGAGATGGACTTTCAAGCTGTGTTGTCCACCCCTCCCTCCCAATCTCTGTGAGTGTGGTTAGTCCAGAAGGGAGAGAGAGAATGCTTTGGATGAGGGGTATTAAGAAGGCCCAGTCCCCCAAACAGTGATTTTTCTCTTAGCCTCAACCAAGCATCAAAGATTAATTTACTTTTTCATAAGGACCATTAATTTTGCAAACCAACATGCAGGGGGAGTTTTTAGACTATTAATTTAGAACCTTCTTTCCTGGAACAGCAACCCTGAGGAAGGGAAATTGGAAGCATTTGAGGACACCTGAATGTACTAAGGGATACAGAGTAACTCTGGGCACAGGTGGAGCCTCCCTCCCTTGTGGTCAGCAAGATGAAATGAAAAAGAAGGTGCCCTGGGCCCAAGAGTGATGTAAGGATGCAGAAGGAAAGAATGGGGTTTCTTTTCTCAGAGAATCAACAGAACTTTCAGGTCTTCTTTTTCTGCCTCCTTGCTTACTAGATCCATAAGCGTCCCCTAGGAAGATACCCAGTGGCTCATTCTTGCAGCACCTTACCCAGACTGGCCAACTCTGATTCTCTTCTTCCTTTTGACCTTCAACCTCATCCTACCCAGGGAGTGCCCTGAGTTCCTCTGAGGAAGAGGTGAAGAATGTAATTTCTGCTGTGTTCCTCATCCCTTATAGTACACTTATATTTTCTCCAGGGTCTTCTGGAAGCAATGTACTAACTTCCTACTCCACATCCCACTCCCGAAAATAGGATGACAGTCACTGACCAAGTTTTCTGGAGGGAGACAGGAGTCTCTACCCCTCAAGTCACAAATGTAGTCTTCCCTGACTTACATCTGGGACCAGTCCTGCCCAACTCTCTTATCGCTGCATGTACCAGGAACCCAGTTCATGGAAGCAGCAATACAGGAACAATTATCCTTCATTTATAATTCCAAGTCTTTTCACTATGTAATGACAGCTATTACATTGAGGCTTATCATGCCTGTAAGTCTCAGCCTCATCCTTGGAGCCAGGAAAATGGTTTTGCTCTACATTTGCCTTCGATTGCTTTCCTTCAGGATACTCTTGGCAGGGGAAGTTCTTTTCCAGCGCCTATTTTATCAAATATGATATATTACTATGAAACACTAATTTTTATAAATAGTAGTGCCACATATGACATTCTGCCCTTCCCCTAAACTTTGAAAATGGGACATGCTGGAATAAATTTAAAGTGATTTAATATGAACATTGGAATTCTCATTATTGCTTTCCAGCTCACCTTTCTAAGAGGTCATCATTTCTGAGACAAAACCCATCCATTTCGCATACCTGTTACAAATTCTTTATTCCAGGAAAGGGAATGTTATGCTTGAAAATGATGAGGAATTCTCTTAATGGTTTGGCTTTTCATTTTCTTCAAGGTTACTCTAAAAGGATCATAATTTTGCCAGCCCAGTATCTCTCCTAACTGTAAATCAATTTAAAGTCTGAATTTTGATTCCTAATTCCAGACCATCCATCATTGGCTTTATTTCCTGCTTCAAATATAAACAAAAGCTTCTATACTTTCAATATGATTTTTTTTTTTTCTCTTCTGAGTGGCTTTGGTGCTTCAGAAATTGAGAATTTTGCTAATAGCCCCAAATCTTAGCAAAGCAGGTCCTGCCTGCCTATTTTTCAACTAATCCATCATATTAAGAATGGTGATGCTCTGGGAATATAGCTTTGTGAAAAATTGCAACTGACATGCACCACAAAGTCCAACCAAGCTTTCCTCCAGAATACTTTATTTAGCTTCACCCCTTTTATCTCTGTTCACAAAGCTAGGTCAGATTCCGATTTCCAGCCTCCTTGCTAACCTTTCTAATTCTAGTCTCTTGCTTGCTTGCTTGCAATTTTCCTGACACTTAGAGCAGTACCTCTTACTGTGGGCTGTTTACTGAAATCATCCAGAGAACTTAAACAATCAAAAAAAGACAAAAACAACAATATTGATGGCTGGGTTCCTCCTCTAGGTTAAATCGTTCTGCCCTACAGTCTGGGCACCAGGATTTTTCAAAGCTCTCCAGGTGATTCTAATATGCAGTCAGCGTTAAAAACTACTGAAACGAGTCATCTTCCAAACATTTTATACCAAGTCTTTTCAGAATATTGGGGTGGCTCCAAATTACCTCAAGTAATCAAATTAAAATACCTAATCGTGTGCCATAAGACTCTTTGCCAATTGACTAGAATAGTCCCCTTTCAAAACAGCTTAAATTTATCTCCTTCCTAAAGCTTCCCCAGATTAGTCTCACCTGGCTGCCTAAAGATCGCTGTTCCCAATTCTCTGAGCATTCCAACTGGCAATGGTTTACAAGCCCTTGGACCACAGTTGATTGTGTGTATTATTGTTTTAATCTCGCTTTCATAGATATCTGTCAGAGGCTTTACTTGTAATCTAAATCTCTCTGAAGTCCCACTAGGTCAACAGACAATCTCAAAATAAACAGAAATGTTATTCTTAGCAGCACTTTCTCCTACCTACCAGAAAGAACATTCCCTGACACAGGGCAGTTCTTTTTTTTTTTTTTTATCACTGCAAGTAAAGTCAACAGTTCTAAGAATTTGCATGTTTTGGGGTTGGTTTTTTTTGTTGTTGTTTCTTACGAAAGTAAAAATAGCTTGCATAGCTTGACTGACCATTTACTTTAGGCATTGGAATTTGGCTTCCACAC TCONS_00184495 TCONS_00184496 TCONS_00184497 TCONS_00184498 . 5' 777 TCONS_00184495 TCONS_00184496 TCONS_00184497 TCONS_00184498 . 5' 777 EMBV3_20415 AAACCAGCTTCCTTCAGAGAGCAGTGCTTTTGGCGGGGAGGAGGAAATCCCTTCATACTT Gene GeneID:527403|MAT2A:NM_001101131:98_cdna UTR3_Alt 4 NULL GeneID:527403 11 GENE MAT2A NULL methionine adenosyltransferase II, alpha EMBV3_09418 CTCTGGAGTGGCTGTTAGTTAGGGCTGATCACTAGGCATCTGTGCAGGAACCCAGGTTTT Gene GeneID:511689|HEG1:XM_002684814:227_cdna Constitutive 0 NULL GeneID:511689 1 GENE HEG1 NULL HEG homolog 1 (zebrafish) EMBV3_32658 CGATCCATATGTACCAGAACCAGTCCCCTGGGTTAAAAGTGCGATTTCTTCAACACTGCC Gene GeneID:510820|TSR1:NM_001101933:88_cdna Constitutive 0 NULL GeneID:510820 19 GENE TSR1 MGC166095 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) EMBV3_36840 CATGCCGCTCTCAAAAGAACTGATGTGCTTGGAAAATCTGTAGGGCTCTGATTTATAATT Gene GeneID:504871|CDV3:XM_002685093:55_cdna Constitutive 2 NULL GeneID:504871 1 GENE CDV3 NULL CDV3 homolog (mouse) EMBV3_30180 CGACGCCGAGCAGCAGAGACCACCTGAAAGTGTTCTGGACTTGGTGCTTCATTCTGCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28697 CACAGAGAACACCAGAGCGTCACTGTAAGTGGCTCAAACTGTGCTGCTATACGGGCAGTG Gene GeneID:516578|TBP:NM_001075742:8_cdna Constitutive 2 NULL GeneID:516578 9 GENE TBP NULL TATA box binding protein EMBV3_06584 GACTCATGGGGCTTCTGCTCTCTGGCTTTGGGGCTGAATGCTTCCAGTTTCATAGGATCA Gene GeneID:522679|LOC522679:XM_002692993:162_cdna Constitutive 0 NULL GeneID:522679 15 GENE LOC522679 NULL similar to claudin-like EMBV3_34066 GTGATATCGATTAAACCCCTGAATCCAGCTTTGCCTGAAGTCATCAGTCATCAGTCCCTG Gene BVT0101_073430 + 1 EMBV3_03037 GK000017.2:56701106-56724776 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31260 ACGTTCATCTTGGGGAGGCAGAGCCTCTAATAGAAGGTTGAGCACTGCTTTGGGTGTGTA Gene GeneID:505964|MYL9:NM_001075234:895_cdna Constitutive 0 NULL GeneID:505964 13 GENE MYL9 MGC138944 myosin, light chain 9, regulatory EMBV3_30497 AGGGGTGAAGCCTTGGCATCGTGTCATTAGACTTGAGGATCATGGCTGCGGGAAAGTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16179 GGGCAAAACAGGTGCACTTTGAAAGGAAATAACCAGATATCACTCACCGTGACCGTGTGG Gene GeneID:100337053|LOC100337053:XR_083815:7_cdna Constitutive 0 NULL GeneID:100337053 12 PSEUDO LOC100337053 NULL ATP-binding cassette protein C4-like EMBV3_08523 GTATGTATGTATGTATGTATGTAGCAATTCCCACGGGATTCTGCATATTCTAGTAATAAA Gene GeneID:511596|NDP:NM_001046090:22_cdna Constitutive 2 NULL GeneID:511596 X GENE NDP MGC137650 Norrie disease (pseudoglioma) EMBV3_30992 GTGTACATCAGGGCCTACATAGGTTGATGGCAGCCTGATTGCAGTTTGGTTTCAGTTCTG Gene BVV0102_185100 + 0 NULL GK000030.2:15266979-15389373 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41216 TCAATAGTGAGGTGTCCACCCTCCAGAACACGAGGATGCTGACATTTAAAGCCACAGCTC Gene GeneID:100336607|LOC100336607:XM_002688730:2_cdna Constitutive 0 NULL GeneID:100336607 7 GENE LOC100336607 NULL EGF-like module-containing mucin-like hormone receptor-like 2-like EMBV3_07962 TCAGCCAGTGAATCACAGGGTTTTTTGTTGTTGTTTTTAAGTAATCTGTTATCTCCAGAG Gene GeneID:530027|MAN1A1:XM_002690078:5_cdna Constitutive 2 NULL GeneID:530027 9 GENE MAN1A1 NULL mannosidase, alpha, class 1A, member 1 EMBV3_21261 CTTCGCCTGGAAAACGAAGGGACTGGGCAAAATGACCTCTAAAGTCCCATACTATTCTGG Gene BVV0102_124952 + 0 NULL GK000003.2:20195551-20228527 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43784 GGTTTGGCATTCTTGCTGCCTCCATTGATTCTCCCCCCTCCCTGTGGTCCAAGAAAAGAT Gene GeneID:523073|KRT85:NM_001101111:15_cdna Constitutive 0 NULL GeneID:523073 5 GENE KRT85 NULL keratin 85 EMBV3_02798 GCGGATCCACTTGTTCCTCAAATGCTGTTTGGTTCTTGGTGTGCAGCGGTCTCTGCTGGA Gene GeneID:523297|TCP11:NM_001110079:140_cdna Constitutive 0 NULL GeneID:523297 23 GENE TCP11 MGC133725 t-complex 11 homolog (mouse) EMBV3_23800 GAGCACGACGGAGGTGAAATTCTTACCGATAGCAAATACGGACACTTCTGGTCGGTTCAG Gene GeneID:614288|MKKS:XM_002692031:22_cdna Constitutive 0 NULL GeneID:614288 13 GENE MKKS NULL McKusick-Kaufman syndrome EMBV3_32045 GTCAGTGACCAAAAGGAAGTGTTACCCGCGGGCGTGACGATCAAACAGGAGCAGAACTTG Gene GeneID:530401|NFATC2:XM_002692357:209_cdna Constitutive 0 NULL GeneID:530401 13 GENE NFATC2 NULL nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 EMBV3_38868 CTCCAGAGATGGAGAGAAAATAGGCCTGGTGACTGGTGTGGCTGAAGGGGAGTAACTGGA Gene GeneID:788224|TYRO3:XM_002690798:4_cdna Constitutive 0 NULL GeneID:788224 10 GENE TYRO3 NULL TYRO3 protein tyrosine kinase EMBV3_19828 GGTTCTGAGCCAAGAGGCTGAAGGGACTTGAAGACAGAGTTTGGGGTAAAAGCATAGTCC Gene BVV0102_386793 - 1 EMBV3_30003 GK000018.2:58821827-58865345 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087260 TCONS_00087259 TCONS_00218365 TCONS_00140862 TCONS_00091417 4 XLOC_052423 XLOC_131688 XLOC_085291 XLOC_056192 Coding TCONS_00087260 XLOC_052423 NonCoding Coding - 18:58835168-58841472 - TSS64819 2859 5 TCONS_00087260_6 83 0.966072053165443 2 0.546723782325877 3.97393840993752e-05 7.02929804861141e-05 0.000209755789372649 7.15762371115843e-05 0.000192996514341018 9.61949112823321e-05 0.000244905075483057 0.00021600837294806 0.000303209388020571 3.72153947936596e-05 0.000162897840981958 0.000125657069891721 3.11448183026399e-05 5.21773240321052e-05 1.2393221063309e-07 9.39028736577736e-05 1.57297304078122e-05 0.000288217087163666 0.000113555009805358 0.000219472754863599 5.59220792876295e-05 4.36310387931468e-05 0.000333112813520478 1.11929287362257e-05 0.000299272725349182 0.000342934354286639 0.000114315894390601 8.79092499845665e-05 2.74029758338975e-05 0.000200212055379116 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 854 88.92 0.229101084295208 0 noncoding 1 1 0 1 1.55657144251834 0.000204121725010461 0.0420730815901053 0.598332402750368 CCATTGGAGGACGGCGAACGGTGGCCAGTTGGAAGGTCTCTTAAGTATAATACTGTTTTACAATTAGACTGGTTCTGTAAGGAACTAGGAAAAAGTGATCTTAAAAGATAGCTTTCTCACTCAGTTGGCTCCAGATATCCGCCGTAAGCTATTAAAATGGGCGTATAGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATCAGGGAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCACCATGGCTATGAAAATCGTTCTTAAACAGCCTGAAAAAAATGCCCAGGTAAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATGTAAGCCGCCTCAGGCATCTAAGCCACCCCGGCTCCATGTCCGGTCTACAAAGGACCACACTGGAAGAGAGACTGCCCTCAGAAGCCTAGGTCTCCGGGGCCGGACTCTCAAGACAATCCAGACTGAAGATGGGCCTGATAACCTAGGTGAGCCTACTTCTGCTGACTCCAGAAATCCTGAGTGTACCGTTTGATCCTCAAGACAATGCCTTCTTCTGGGCTCACTCCTACCCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGTAGAACACTCCCCTCTTCATCAGTGGGAGGTTTCCCATGGTGGACATCTCCACTTAAAACAAAAGACTTTCTCCAAGTCTCTAAATACCTTCAACAATAATCACATGCGATACCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGAACTAGTGCAACACATTTCACTTTAACTATATACATAATGTGAATTTAAATTTTGGTTTTAACTTGTTTTAATGACTATGTTGCCTTACATCTGTAACTGTGTAACTAGATTTGTTTCTAGCCACATAAAAGCTTTTAAGTTACAAATGGTTGCTCAAACTCCTGCTACTGCTACAGCTTCCTCCAACTACTACTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAGTTTAGGGACAATGCCCCTTGTCAGCTCCGAAGCAGTTATGGAACAAAAAAGATGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGCAATAAGAGGGTAACAGGCAGGTAGGCCAGGGGTCTCCAAACGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGTGATATTTTTTCCTTCTCTAAACAAATTTAAAAGGAGGTTTCTCTTAAAATACTGTGTTGCCATAATGACACCTGGTTTCACCTGAAGTTAACTATTCTCAAACCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTTTTAAGTTATGTTAATGGACTATGCTTTTACCCCAAACTCTGTCTTCAAGTCCCTTCAGCCTCTTGGCTCAGAACCTACTTGACATACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAACAAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTGATGGCCCAGGATAAACCATTTGCTGCCAAGATTATCCCGAAATACATCTTATGAGTGAGGGGCCTGGTGCCATTCTGAATTTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGATATATAACATCCAGCTGAAGACTAAGAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTCCTCTGGGGGCTAAGAATCCCAGTGTCTTTGCCTGATTCAACAACAATCTTTCAAGTTGACTCACTGGAAAAGACTCTGATGATGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACCAACTCGATGGACATGAGTTTGAGTGAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAATTCATGGGGTCGCAAAGAGTAGGACTCGACTGAGCGACTGAACTGAACTGAAGATAATATAACAACAATGAATCCTGCTTGAGGACATGTTTCTCCTTCTTGAGAACCTTCTGATTAATCCTGTCATCTTGAAATGTAAATTCTGGGCATGGGTCTCTTAAGACCTTTACAACCTTGAGACATTCTTTTGACTTACTGTAATAACTAATTGAGAAAGTATATAGCTCCCTTGCTAAGACTAGCGAGGGGTGTGGGGGGCATTCTCCATCCCCCTTCTGATGTTTATGTCAGAAGCTTTCTCTGTCCCATTTCATACTTTAATAAAACTCTGCTACACCAAAGCTCTTGAGTGATCAAGCCTGGTCTGTGGTCCCAAAGCTATATCTACTTCTTCGGAGATCATGAATCTGACATTGTTCACTGTAAGCTATCATCTCTATGTACATTACAAGAGGTTTCCAACCACTATTAATGTTGTGCTTTCCTCTCTGCCCTGAGATCTCATCTCTGTTTACACTTTTGATACATTCCCGTCCATTTGGGGGATATGTTTTGTTTCCAAAACAAGTATCTCAAACTAAAATATATGATGTATGAAAAGAGCACACCTAACATTGTTTTCAATGGTGAAAGACTGAAAACTTTCCCTCTGAGATCAGGAAGAAGGCAAGGACGCGCACTCTGCATCACTGTTCAACAAAGGACTAAAAACCCCTAACCAGAGCAATTAGACAAGAAAAAGAAATCAAAGCTTC TCONS_00084491 r 5' 8354 TCONS_00084491 r 5' 4380 EMBV3_01177 AGCAATCACTAAAGCCACCAAGCCAGGTCCTTCCAGCCAAGGATGTGCCCACAGTATCAA Gene GeneID:783691|ARGFX:XR_083577:137_cdna Constitutive 0 NULL GeneID:783691 1 PSEUDO ARGFX NULL similar to Arginine-fifty homeobox EMBV3_21597 GCATATGGACTACAAAGACACATTCGACATGCTGGACTCGCTGTTAAGTGCCCAAGGAAT Gene GeneID:521089|CCNT2:XM_002685417:28_cdna Constitutive 0 NULL GeneID:521089 2 GENE CCNT2 NULL cyclin T2 EMBV3_00710 TGACCTGGGTCTTCAGTAAGGTTGGATGTCGGCCTTTCTCAGCTGTTTTAGGTGGGTCTG Gene GeneID:531539|LOC531539:XM_002694747:140_cdna Constitutive 0 NULL GeneID:531539 18 GENE LOC531539 NULL similar to KIAA1609 protein EMBV3_09940 CTCGTTTTGACGATGGTGCTGGGGGTGACAATGAAGTGCAGAGGACCATGTTGGAACTGA Gene GeneID:530186|PSMC2:NM_001015639:132_cdna Constitutive 0 NULL GeneID:530186 4 GENE PSMC2 NULL proteasome (prosome, macropain) 26S subunit, ATPase, 2 EMBV3_31943 CATTCAAGGACAGAGGGGTATTCAAGAGGCAGAGAGTTCAACACAGCTGAATGGTAGCTC Gene BVV0102_023619 + 1 EMBV3_05080 GK000011.2:7492872-8927584 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31978 AGTGAACGTCACTGTGAGAAGCATTCCCGGGATTAAAAGAGGCCTTGTTGCGGGAGGAAC Gene GeneID:534753|FCRL4:XM_002685957:33_cdna Constitutive 0 NULL GeneID:534753 3 GENE FCRL4 NULL Fc receptor-like 4 EMBV3_16753 ATGGAACCCAGGTCTCCCTCGATGCAGGTGGATTCTTTACCATCTGATCCATAAGGGAAG Gene BVT0102_187224 + 0 NULL GK000029.2:24806789-24810563 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28007 TGTCCATTCTTGTCGGCTCCTCCGTGGATTACTGCGTCCATCTGGTTGAGGGCTACCTGT Gene GeneID:616017|PTCHD2:XM_002694042:115_cdna Constitutive 0 NULL GeneID:616017 16 GENE PTCHD2 NULL patched domain containing 2 EMBV3_22893 GTGACTTCCTTCATTGGGACTTGCACCGTCCTCTGGCCATGTTCTCGGGAACCGTGTCTA Gene GeneID:100297046|LOC100297046:XM_002698092:118_cdna Constitutive 0 NULL GeneID:100297046 25 GENE LOC100297046 NULL hypothetical protein LOC100297046 EMBV3_15866 ATTGGTCAGAGGATGATGTCTCAAACTGGCTTTGTGCCGAAGGTTTAGAAGACCTCGTTG Gene GeneID:783784|WDSUB1:XM_002685348:216_cdna Constitutive 1 NULL GeneID:783784 2 GENE WDSUB1 NULL WD repeat, sterile alpha motif and U-box domain containing 1 EMBV3_18049 CCCTGAAGGTGTTGGTGCCAAACAGCGTAGCAGTACAATCCTTCTCTAACTCAGATTGTC Gene BVT0102_186527 - 0 NULL GK000004.2:86111100-86211496 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191007 TCONS_00191011 TCONS_00191008 TCONS_00191012 1 XLOC_116791 NonCoding TCONS_00191007 XLOC_116791 NonCoding NonCoding LOC100848544 5:22625469-22628965 = TSS143219 3376 1 TCONS_00191007_2 65 2 0.034620886981402 1.5111003749039e-06 0.00020778641343179 0.000185520204301613 2.8361353465733e-17 0.000180588096719431 5.25557972004373e-05 0.000113660896300855 0.000106402466765337 0.000894731805877386 4.52051888085117e-07 4.61388779789111e-05 0.000689931724721625 9.47375320800523e-05 0.00036874070009872 4.44398215595249e-05 0.0150918581849038 0.0053930468381112 0.00850052918611521 9.75743439336414e-12 2.53794650356092e-145 3.35962355013987e-07 0.00590806850881394 0.00433498638866908 0.00524934728019952 7.641542726364e-07 1.69750126611377e-14 0.000277727196370254 0.00203899250879232 0.00070961862713482 0.000929491266933801 XR_230216.1 LOC101903901 PREDICTED: Bos taurus uncharacterized LOC101903901 (LOC101903901), 0.0 3763 99.71 0.622037914691943 XR_247199.1 MALAT1 PREDICTED: Homo sapiens metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) (MALAT1), transcript variant X1, 0.0 1528 79.92 0.518364928909953 0 noncoding 0 0 0 0 0.0152921198394766 0.919323018544741 -0.00935778563342343 0.852177977772947 GAGCAAGAATAACCATCGAGTTATTGGACTTTGAGCTAAGATGAATGTTTAAATCCTGAGGACTAGGCGCTAAATAACAGCTGACGCAGGTGCTACGCAGAAGTGGATTCAGTGAAGCTAGGAAGACAGGAGCGGCAGACAGGATTCGGAGCCAGTGTTGGTGAAAACTAGGACTGAGGAGCCAGCGGCAGTTCGTGAAGATAGGAAAGAGAAGCCCGGGAGCCAGTGCGACTTGGTGAAGGAAGCTAGGAAGAAGGAGCGAGTCCTAACGATTTGGAGGTGAAGCTAGGAGAGGATTCCAGGAAGGAGGAAGCCAGTGCGGTGTGGTGAAGCTAGCGTGCGGCTTGGCTTGGCAACCACGCGGAGGCGGCGAGCAGGCGGAGTGGAGGATAGATAGAGGATCCTAGAGCAGCAGACCAGTGTACGAGCCCCGCAGGGAGAGCCAGTGGTGTGGTAAAAATCCGTGAAGTCGGCACTATCGTGGGTTTTTTTTCCTCCTGTAACTCAGTATGGTAATATCTCTTATTAAATTTTCCTAATAGTAATGGGGGAGTTGTGTACTTAAGCATAAAGGGGATTTTATTACGGGGATGTAGGCCGGTTTTCGGGTGTCGTAGGTTTCTCTTTTTCAGGCCTATTTTCTCATGCATCTTGTCTGGAGCTTTTGAGGGCAGACTTCAAGGCCCGGAGGAATGGTAGATGGCAAGTGTTCTTGTTTTTAACCAATATGAGGGATGTCCTGAATTTGGTAGAACAACTGTGAGACAACTTCAGCAAGCTTTGTAAACAGGTTTTATATTCAGTTTGGGGGTAATGAAGCATTTCAGTTTCGTGAGTAGAGGGCCTACTTTTCTTTCCTCACCCTGTATTTTAAAAGTCTTCTAAATATGTAGTTTCGGTGTATAATTCTGGGCGGGGGGAGTTTTTTTGGGGGGGGAGCAAAATATGTTTTGAGTTCTTTTCCCTTTAGGTCTGTCTAGAATTCCAAAGGCAAATGACTCGAGGTAACAGGCGAAAAGAAAATCCAATATCAGGATAATCAGAACACTGCAGGTTTACAGTTATAGAAACTCTAGCACAAGCAGCTTTCACTTTGAGGTCTGTGGCGCAGCTGTCCATTGGAGTAATGGCTGGTAGTTTATTCTTTTTTTCCCCACCCCTTTATTAAATATTTTTATAAAGTACGTAACTGGTTATTTTTACTTAAATATTTTGGGGTGGTGTGAACAGGGAAGAGGGTGGGGGAGAAACTTTTTTTTTCTAAGATTTTCCACAGATTCTATAGTACTATTGACAATCTGAGTTAGAGAAGGATTGTACTGCTACGCTGTTTGGCACCAACACCTTCAGGGATTGGAGCAGCTTTTTTCCTTGGAAGAGTATTCCCAGTGAAGCTGAAATGTACAGCCCAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGACTAGGCCAAATGTTGAAGTTAAGTTTTCAAATAACGACTTTTAAGATACCTTTATTAAAGGGGAGGGGCAAATTTTGGCGATTTGTAGTTGGCAGTGGCTTGTAATGATTGGGATGGGGGGGGCGTGGGTTTAGGTAATTGTTTAGTTTTTGATTACAGATAAACTCATGCCAGAGAACTTAAATACTTAAGGTGGAAAAACTAAAGAAATCTCAACTTCCAAGTTGGCAAGTAACTCGAAATCCTCTGGTTCTGTTTTGCCCCAATTTTTGAATTTAACAGATGGGGAAGTTGATGACGATTCACTGGATTTAAAAGAGTAGGGCTTGGGAAAGGAAAATGACTGGGGGTTGGTCTGGCCCTCTGCGCTGACTTAGATAAAAACTTGGGGAATTTTTTTTTAAATGGTAAAGTTCGGATATAGTGTGTGGTTCTCTCTTGGAATATTTTTCAGGTGATTTAATAAAACTTAATACTACTATAGGAGCTTCAGAGCAAAGGAGGTGGCTTAATGATCCTGAAGGGATTTCTTCTGGTGGTAGCTTTTGTATTATCAAGTAAGATTCTTTTTTCGGCTGTATATAAGCAAGATTGTTTGGTTTATTCTTTTCTTTTTTAGCGGGAAACCTTTTTTTTTTGTAGACTTTTTTCAGATAACATCTTCTGAGTCATAACCAGCCTGGCAATCTGATGGCCTAGATGGAGAGGGGAACAGCTCCTTGGTGAATGATAAGTAAAGGCAGAAAAGATTGTATTTCATACCTACATTGGGGAAAAAAGCATAACCCTGAGATTTTCTTCTGATGAACACATTGTCTGCACATGCAAAAAAAAAAGCAAATGAAAACTACCAATTTAAAGTTAATGGAATCTACTACTATAAAGTTAATGGCTTAGCAAGCTGTATCCACAAAAATAATGAATTGATGAAAAATAAAAATAACGATACAATGAAGATCAAAATGTCAATCTCAATACTGCTTTTACAAAAGCAGAATTAAAAAAGCGAAATGAAAATAGCGCTACATATTAATCCTGGAAAAAAAAAGAAGCTGAAATAATTGAAATGAGTGGGATCAAGTGAATTGAGAGGAGGAAGAGGCTGTGCTGTTTGCCAATCTTTCGTTTGCCTCAGACAGGTTTTTCTTCATTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCAGTATTGCATGTTAGGAATAAGTGCTTACCTTTGTGAAGAGCTGTGGAAGTCCTAGGTCCCTTACCTAAGGGATTCCAGGATTGTGAGGCATCGTCCCATCCAGCCTTTTAAAATTAGACAGGACAGCGTTCCTGTGGGCTTTGATGATGGGACAGCACATTTCATTCAAGAGGCAAGTAATTCCTTAAAGCCTCTTGAGATTAGCAAAGATAATGTTTATAAAACTAAGAACATTTGTTTAGCCTTGAATCTGACAGCCCTATTTAAGGGATAGTATTGTACTGTTAAGAATTCAGATTTTGTTAATCTTGCTAAAATTCAAATGTTACGTGTATTGTGCAGAAAACCATTAAATCATTCAAAATAAAATACTTTTATTTTTAGAGAATGTATGCTTTTAGGAAGCTGTCTCCTTATTTAAATAAAACATTGTTTGTCTGTAGTTAGTGTTGGGGCAATCTGGGGGGGGTTTCTTCTCATCTTTCAGAAACTTTGTCTGCGAACACTCTTTAATGGACAAGATCAGGAAATTGAGCAGAAGAACGAATTTAATTTAAGGCAGGAAAAAATTTTGTCCTTCGTAAAAGTGATGAGCATTTAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAAATACCTCTTAGACAGGTGGGAGATTATGATCAGA EMBV3_40223 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11099 GTCTTTTATTAGTGTGCCTGGGACGTCTACGGAAATATTACTCGGTGCTGGTAGTATCGG Gene GeneID:535794|ARNTL2:XM_002687728:39_cdna Constitutive 0 NULL GeneID:535794 5 GENE ARNTL2 NULL aryl hydrocarbon receptor nuclear translocator-like 2 EMBV3_09237 TATGGCTCTCATGGTTGCCATGATTAAAGCTGATTCATCTGAAGAGGAACACCGGCTTAG Gene GeneID:286765|STATH:NM_174752:20_cdna Constitutive 0 NULL GeneID:286765 6 GENE STATH NULL statherin EMBV3_35110 ATGCACCCAAAGTATCGCCAGAAGCAGTGAAGAAGGAGGAAGAGTTGGACAAATACCTGG Gene GeneID:782038|LOC782038:XM_002686315:230_cdna Constitutive 0 NULL GeneID:782038 3 GENE LOC782038 NULL similar to protein phosphatase 2C alpha EMBV3_32113 ATCTCCTGTTGGACACAGGGTATCAGGGAAGGGGCCTCGGAGACATGGATGAGTACAAAA Gene BVV0102_141234 + 0 NULL GK000005.2:73901168-73905662 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192531 TCONS_00192532 TCONS_00192526 TCONS_00192522 TCONS_00192528 TCONS_00192524 TCONS_00192523 TCONS_00192527 1 XLOC_117202 Coding TCONS_00192531 XLOC_117202 Coding Coding HMGXB4 5:73872707-73902289 j TSS144048 3361 1 TCONS_00192531_2 482 0.0428443915501339 9 0.886684020148068 2.88143507404954e-09 0.00492857785262304 0.00373631936511811 0.00176139067878193 0.00259185622142601 0.000176197373707033 0.00165242755469305 0.00297517593734713 0.00246719415045666 0.000184425412549633 5.62932253682783e-05 2.97192297779167e-05 5.01127910982145e-07 0.00035082357128068 2.55487763377881e-07 0.000756584995625013 7.09683127352166e-58 0.000905688825363311 0.00665434133909569 0.00733653334181417 0.00120782590051245 0.000838081749098103 2.01175918027358e-08 8.29587138965042e-33 0.00701457740826 0.00435447410309808 0.00387000372076726 3.64381846808326e-05 0.000174802633671301 1.17224131436339e-25 XM_005206779.1 HMGXB4 PREDICTED: Bos taurus HMG box domain containing 4 (HMGXB4), 0.0 3074 99.88 0.508182088664088 NR_027780.1 HMGXB4 Homo sapiens HMG box domain containing 4 (HMGXB4), transcript 0.0 2287 89.85 0.506396905682832 TCONS_00192531_2 sp|Q9UGU5|HMGX4_HUMAN HMGX4_HUMAN HMG domain-containing protein 4; 0.0 767 92.92 0.993775933609959 3 coding 0 0 1 1 -0.205470824287854 0.383044675911799 -0.0328157777506479 0.603891538238908 AGTTCTCCTTCCTCTTGAATTCTAGGACAGTGAGCTTTACTTCTTGGGGACGGACACGCACAGGAAAAAGAGGAAGCACTCCTCCGATGACTACTACTATGGAGGACAGTGGTTCTTGTTCTGAGTGCCGATAAACCAGTGTGAAGGAGGAGAGAGGTGGAGGGCTGGTATTTTGGAGGATTCAGCATAGAAGAACAGTCTTCATTTGTGATACACCAGATATTTCGTCTTTGGAGCCGTCACAGAAGAAAAAGAAAAAGTCCAGCCCACAGTCTGCTGATACAGCTATGGACCTATTGAAAGCAATCACTTCCCCTCTGGCCACAGGGGCCAAACCCTCCAAAAAGATAGGAGAAAAGTCGTCCAGTTCCTCAAGCCATTCGGAGAGTAAGAAGGAACACCACAGGAAGAAAGTCAGCGGAAGCAGTGGGGAGCTGTCCCTGGAGGATGGCAGTTCCCACAAATCCAAAAAAATGAAACCGCTCTACGTGAACACAGAGACACTGACCCTCCGTGAGCCTGACGGCTTAAAGATGAAACTTATCCTCTCGCCCAAGGAGAAGGGGAGCAGCTCCGTTGACGAGGAGTCTTTTCAGTACCCCTCTCAACAAGGGACTGTGAAAAAATCTTCTAAAAAGTCAGCTCGGGATGAGCAGGGTGCTTTACTCCTAGGACACGAGTTACAGAGCTTTCTAAAAACAGCCCGGAAGAAGCACAAGTCATCCTCAGACCCACGTTCATCTCCTGGCCCCGAAGGCTGTGGCTCTGAGGCCTCCCAGTTCCCAGAATCCCACAGTGCTAACCTTGACCTTTCAGGGCTGGAACCTATCCTGGTAGAATCAGACTCCTCCTCTGGCGGGGAGCTAGAGGCTGGGGAGTTAGTGATCGATGATTCTTACCGGGAAATCAAAAAGAAAAAGAAGTCAAAGAAGAGCAAAAAGAAGAAGGACAAGGAGAAGCATAAAGAGAAGCGACACTCCAAGTCCAAGAGGAGTTCGGGGCTTCCCCCTGCTGCGGTGGCAGGAGAGGTCCCCGTGCCGCCTGTCCCCGCTCCCAGCCTCCCGTACGCCGGAGCCCCCACCCCGCCCCCACCGCTTCCCAGCCTCCACACAGACGGGCACAACGAGAAAAAAAAGAAAAGAGAGGAGAAGGACAGAGAGAGAGACCGAGGAGAAAAGCCAAAAAAGAAGAACATGTCGGCCTACCAAGTGTTCTGCAAGGAGTACCGCGTAACCATTGTGGCTGACCACCCAGGCATAGATTTTGGGGAACTGAGTAAAAAACTGGCTGAGGTGTGGAAGCAGTTGCCAGAGAAGGACAAACTGGTTTGGAAGCAAAAAGCTCAGTATCTACAACACAAACAGAACAAAGCAGAAGCTACAACTGTGAAAAGAAAAGCATCCAGCTCAGAAGGTTCAATGAAAGTGAAAGCTTCTTCTATGGGAGTACTGTCACCCCAGAAGAAATCCCCACCCACCGCCATGCTGTTACCTGCCTCGCCAGCCAAAGCTCCTGAGACAGAGCCCATTGATGTGGCTGCTCACCTCCAGCTGCTGGGAGAGTCCCTGAGCCTCATCGGACACCGCCTGCAGGAAACTGAGGGCATGGTGGCTGTGTCCGGCAGTCTGTCCGTGCTTCTGGACTCCATAATCTGTGCGCTTGGCCCCTTGGCGTGTCTGACCACACAACTACCTGAGTTGAACGGCTGTCCCAAACAGGTCTTGTCTGAAATGTAATGGGAAAGATTATGGGAAGACATCAGTTAACTGAAAATACAAAGCTTTTCAACTTGAAGTGACCTAGGTGGGAGGCGATAACATCGTTCCCATCTGAAAGTTATTGTGATGGCCTAAGTAAACTTAGTAGAGGGTTCATTCCAATTCCTGCTCTATCGGTGTCCATGTCTCAAAACTTATTGTAATCATTGGTACCATTGGCAGCCTCTGTCTGGGCCAAGGAGTTTTGTGAGCCCTGGAGTGGGTAAAGTCATCAGTGTCACCAGTTGCACAGTCTGTACTGTGAACTGACCCAGAGCATTTGGTCAGCAGCACTAAGAGCTGGTATCTTCCATGGGCAGCATCAGCTCAGCTCACAGTTCTCCCGCTTGGTTGTTGGGCGGATGTAGAAGGTGAACTTTGCCCAGCCTAATTCCTGGGATCTTCTCTTTGGCTCCCCTGCTGGCCAGATACATGGCGTTTCGCATTCCACACATAAGCGAATTGCAAAAAAAAAAAAAAAAAAGTACTGTGTTCTCATGTAGGTTTATTTATGTGCGAGTATGAATGTGTTTTAATTATGTGTATTTAACTCTTTAAACTCCCTTAGATTTTAATTTATCCTGTAAATTTCTGTATATATAATTTAAAAAACAAGAGCCTCCACCAGCAACAGCATGTGGAAGAGACTAGATTTGTCATTTCTTCCTCCCCTCCTTCCTCTGGCCTCCTCTGCAAACTCCAGATCACCCACTCTTTAGGGTATCGTGCCTCAAGACGGAATCATTATGTTGGGATTCTAGTTCTTTACAATTAAATAATGTCAAGAAAGTGAAATAAAAAGGAATGTTACCATTCCCAGCTGCCCTCATTTCCAAAGAACCAGATTTTGCTTCCAGTTCCAAAGAAAACAGTTGAGCCCTTCAGGGTTGTTTTTAAATTTGGTGCAAGAGTCCACATCAAAACCAAGCTCTGAGGTGACTGCTTGCTTCCCTTGGCCTGGATGGAGCAGAGGCATCAGAGTCGATCTCTGAGGATAGTGCCCCCAGCCTGCATCCTGTGTAACTCCTTCCATCCTTTTTCCTTCCCATCCATACGGTCACAGGACTGTGTTCCTTAAAGGTATTCTGGCTGCCGAATGCCTTTCTCACCTCAGAGCAGTTTTGAGATTGAACTGGGGAAACAGAAGGGAACAGGAATGTCTGGGAACCAAAACTACGAAGAGCAGAAGTCCTGGTTTGATTTCGTGTGTCAGCGCTTGTCGCACACCTCCTCTCTACCCAGGTCATCTCCTGTTGGACACAGGGTATCAGGGAAGGGGCCTCGGAGACATGGATGAGTACAGAAAGAAGCCAGTCCCACCATCGTCATTTGTACACATTAACGACGTCTTGACGAGCGCCTGCTTTTTGTTTGTTTGTTTTCCTTTAAAGTCCAACCCTATTGTATTTGTATTTAAAATTTGTAAACATTTGTATAATAATCTGTTCCTTGTGGTATTTGGTACTATTAGAGGAAAAACTTTGGATTCAGACCTTCTTGCAGTTTTTATATCATTGTTTTATTTTGTTTTTTAAATAAATTCTAGCAGTTTGATCCAAATCCCATTACAGTTGTATAAAGAAATAAAATTTTGTACTTATATT EMBV3_26316 TAAAACCGACCCATATATCTTTCCGGAGTGCGCCCCATTTCCTCCACCCCACATGGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13137 AGACAGAGTCCCCTAGTTTTGTAGCTCGTGTATGACTGCCATGAGTTCCACCAGAAAGCC Gene GeneID:514220|TMEM184B:NM_001081522:61_cdna Constitutive 0 NULL GeneID:514220 5 GENE TMEM184B MGC142745 TMEM148B transmembrane protein 184B EMBV3_33853 AGCCACAGTGGGAACAGAGTTGTCAGAAGAGTTCTGGGTATATAGAGGATACTGAGCCAC Gene BVT0102_290243 + 1 EMBV3_35285 GK000007.2:98878165-98896054 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214704 TCONS_00218160 TCONS_00214701 2 XLOC_130750 XLOC_131636 Coding TCONS_00218160 XLOC_131636 NonCoding NonCoding LNPEP 7:98877971-98892723 x TSS162262 3437 3 TCONS_00218160_3 69 0.0258946755891766 4 0.767270015592163 0.00108858185173336 0.00174257398056111 0.00126045438653855 0.000454232709563182 0.000834458701864489 0.000378110853216866 0.0010512992836002 0.00101329581104204 0.00129063503995949 9.67155631728564e-05 3.29281491315081e-05 2.07067485155775e-05 9.29823965765018e-05 0.00048939279637702 0.000424534464740469 1.26770730352898e-113 0 2.97464612600785e-87 0.000938459365315212 0.00127995722474871 0.000379727304138384 5.67555027933428e-89 0 5.98742022896377e-131 0.00124767149874366 0.000968566134909016 0.000936389129577712 9.87777915405995e-163 2.48320377637577e-196 1.9944934725728e-110 XM_599899.4 LNPEP PREDICTED: Bos taurus leucyl/cystinyl aminopeptidase (LNPEP), 0.0 5770 100.00 0.930462612743672 NM_175920.3 LNPEP Homo sapiens leucyl/cystinyl aminopeptidase (LNPEP), transcript 0.0 838 78.64 0.279022403258656 0 noncoding GTTCTCTTGAAAACTGAAGTTAAAGAAAGCCTTTATGTTTTGACCTGCAACAAGTTGGTAATTGTTATCTTCATTTACAAAAGAAGGCAGCACCCTGTGACGTGTGGGATCTTAGTTCCCTAACCAGGGATTGAACCCGTGGCTCTGTATTGGAGGTGCAGTCTGAAGTGCTGGGCCAGCAGTGTTCAGAAAGGATTCTGTTCTGCACCCAGGAAGACTGATGTGGCTCAGTATCCTCTATATACCCAGAACTCTTCTGACAGCTCTGTTCCCACTGTGGCTAAAGTACATGTGAAAACATGAATGGTGAAGAACATTAGTGTAAAGAGGAACCTGTGACAGTAAGAACCTCTATATACCCAGAACTCTTCTGACAGCTCTGTTCCCACTGTGGCTAAAGTACATGTGAAAACATGAATGGTGAAGAACATTAGTGTAAAGAGGAACCTGTGACAGTAAGAAAGTTCGTGAACACCAAAACAGTGGCAAACAACATAATTCCACTTAAAGAGATTCATATCGAACAAGATGGAGCAAGGCACAAGCTTACGGTAGCTGCTGACACTACTTCCGTTTAATATATCTAATCAGTTGGTATTAACAAGTGATTAGATATCAACAAACTGAACTCCTTGGATTTCTAGTTTTGTAGCCTTTCAGACTTCCAAAGCCTAAGCTTTTCTTCTACAGTTCCAGATTTCCAATTTTGCCTTTCCTAATAATATGGTATGATGTGTCTTTTTATTAATTCAAGACGACTCTCTCTCTGCAATGAATATAACGCTTGTCAGACAGTACTGAATTGGTCATGGATCTGTGTGCTCATAGAACAAAGAATCGCTGTGCTTCTATCTGAGTTCTCAGAAATACAATGGTGAAATAAAATTCTGGGGGAAAAAACTTCAAACGCTTCAACAACACTTATTATACTACACGGTCTAACCATTATTTAACCTTATATTCCTGACTTAGAGTTGGTTTTTGGAAGCCCTATATAGATGGGATAGCATAACATTAAAAAAGTATGGAATTTCACAGGAAAATCTGAGGTGAGGCCTGTAAATGAAAAATACAATTGGTACGGATCTGGTATTATGGGAATGAATGGCTTTTGAGTACAAAGATAGAAATGGATTTTGACTTACCTCCTTTTTAGCCCATGTTTTGATAAAAGTTTAATTATAACAACCCCCACCCCGTTCCAGACACACACACTCACAGGAAAGAATGATATAATTCAAGACAAGATTTGCCATATGCGGAGCTAACAAATATTATAGAAACAATGTGAAGATGGGCAGACAAAACGAAGAATCTTAAATGATTTTGAGAAGTAGCAAAGTTTAAACTCTGTATCAAAGTGGACTTTAGTAATATGGTTTAAAAAAAAACAACCCAGCAACAAAAAATCCTCCAAAATTTTAGTATTTTTCCCCACTCTAAAAATATAAAAACTCACTTTCAAATATCGACTAAATTATCATTCATTTACTGAAGCACAAGAGTAATAAAGACCTACAATCACCCTAGTTTCAAAAAAACATCTTCAGATGATTCTGTGATTCTCAGATAATAGTATTTTCTACTCTAAATAGAGAGATAAGTGCTGTTTAGAAAACACTAAATTGGGAGAAAACACACTAGGGCTAAAGAAGGTTATCTTTAGTTTCTATTGCCAGTCTTTTCAATTTTGCTATATAAAAATATTTTCATAAAATAAAATATAATTTTATACATAATTCCATATATTCTCACTTGATACCTGCTGAATAAAAAAAAGGTGACCTTTCCCATTGTCTGATTCAGTGGAGTGTTTTAAGTGCTGAAAAATGGGTAAATACCCTTTTTATGTACGTAGGTGTTTTCAAGCAAAATAGAAAGTACAATAAATACTAGGAAGAAAGCTTTTATCCTAAGAATCAAAGAAACACAACAATCTAGGTATAAGTCTGCATAGCTCAAAAAATTCAAGTACAGTATTTCCCCTTTAGAAGGAGTACAATTGCCATATAGTTTTGGATTCTTTCTTTCCTTGGCCATTCCCTATAATCTGTTAGTTTGGCCATTACAAAAGAAAACTTTGATTTTTCAACTAAAGAAAAGTACTGTTTCTGACAGTAGAAAAAATTCAAAGCCCACCATATTAAAATAAACCTAAATCAAGTTATTCCTATCCACATTCTCTTTATTCCTTTAAGGTATTATGGTGAACTTCAAATAAAAATGTTCAATTTCTCAAAGGCCCTATTTTAAAATATACTTCTAATATGCAACTCTATCATATAAAATGAAAAACCACCCAATGGGTATGATTAAGAGAAAGTGTCTGATCTATCAGCCAAAAAGCAACTTAAATAGACTGTAAACTGTAAATCTTAGTAAGAAAGTCATGATAAGAGACACCAGTATTTAAAAAAATGCCATAAATGCAGAAATACTTATTTGTAACACAAGGGATATCTACGGCAGAGAGCGGTAAAGGTGTACAGAGATTTGGAGAATACTGGAATTCATAAGTAAAATAATTAGTGCTAACTCAGTTGGAAATATTTTCCTGAAAGATGAAAAAGAAGGTGTTAAATATTTGGAAAGTTTAATCTTTTGGCCTTGTTATTTAGCTTTACAACAAAAATTTAAAAATTCTGTAGCACCTCACTATTTTTCAGAAAAAAATATAATAGTTATAAACTTTTTCCAGAAAAAAAAGGATTATTCAAAACCCCCAATAAGTAGATCTGCACACCTGAGGTCAGTTCTCTACAGCTGCATGATTCGATGACTTCATTACTATACTTTTTGATGCTAACTTGGAACCACATTCAAATAACATCTATCAACAAGAAGCAACAAATGGCTAACCAACCAGCAGCCTGCAAAGATGGTGGCTCCCATGGTAGCTCTTTCCTTATTTCATGGTGTCAACATTTAGCCAGAAACTGAGAACAGCATTGCAAAACAGATTTTTTTTTCCCATTTGAATATCTTCAAAGTAGAAAAATTACCCACTGTTTTTGTAGACGGTTGGCATACAGGTGAATATAGTTTGGTAATAAATAACTACACACTGCCCAAAGACATTTCAGAAAAGACAGATGAAAAAATACAGACTGGCCCTGAGCAAACTAGAACTCCTAAGAGTGCACACAACTCAGCAGCGATCCTGGTTTCACCGTGGCTTTTGCAAAAGCAGCAGAGGCCCAGTTAACAAGCTCTCTGAACGGGTGATGAGGTACAGGTGTGCATGCTACAGCCAATATGTCAGGGTTTTCAGATTCTTCTCCACCCACTGCATGTTCAACTGAATGACTTCCAAAGCCTCCTGGACACAGCGAAGTCGAAAGGTGGCCTCTGACTGGTTTTCAAAGAATGCCTGGACCTGTAGTTGCACACAGAAGTATTTCAAAAGAAAAGAAAGGCATACCGCAGCTTTGAATATC TCONS_00214707 r 5' 0 TCONS_00214707 r 5' 0 EMBV3_24379 CACACAGAACAACTCTTTCTCGGTTAGTAGGGGTGCTGTTGGCTCACCTATCCACTCCGA Gene GeneID:327686|FNTB:NM_175805:35_cdna Constitutive 0 NULL GeneID:327686 10 GENE FNTB NULL farnesyltransferase, CAAX box, beta EMBV3_33440 TCCTCGAGGTTGAAGTTAGGTCGTTTATTCAAGATCTCTTTCTTTTTACATGTGCGTGTC Gene BVT0102_419654 + 0 NULL GK000007.2:61145119-61205104 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221607 1 XLOC_134921 NonCoding TCONS_00221607 XLOC_134921 NonCoding NonCoding - 7:61174209-61175595 - TSS165605 1386 1 TCONS_00221607_3 87 0.672438672438672 1 0 0.000128841897269368 0.000159498998976232 0.000327162401737404 2.39657981736281e-05 3.56217800326892e-06 2.32276571169146e-05 3.4247694507939e-05 0.000110954227229034 0.00039279910356407 0 0 0 0 0 4.60177306085737e-05 0 0 0 0.000424254784422156 0.000342449405698638 0 0 0 0 7.49834609715801e-05 6.09997105739663e-05 0.000103971440483505 0 0 0 NM_001001159.1 TLR6 Bos taurus toll-like receptor 6 (TLR6), mRNA. 3e-34 150 71.99 0.218614718614719 XR_247647.1 LOC101928053 PREDICTED: Homo sapiens uncharacterized LOC101928053 (LOC101928053), misc_RNA. 7e-30 136 69.36 0.235209235209235 0 noncoding 0 0 0 0 CAAAAGCCATGTGTTTTAAAGCCCCTCTCCATCTTTGTTGCTGTTTTTCTCAGTTTACTCCAAAGTGTTCCCATTCCTTCAGAGTGGAGATAGTGGCATTTGACCTGAGACTTGAAAGATTATTTATAGTGAAAGGCATAATTTAGATGTGTGGTTGGGAGTAGGGGGAGCAGGTGGGAAAGGGGCATTGCTGGCTGAGGAACCAGCAAGCAAAGTACCAGGTGGAAAGTTCTGGGGTATGTTCAGAGATGGTGAAGAATTAAGGTGCAGTGAAGCTCTGGGATGAGAAGTATTTAAAATTAAGCTTGAGGATATAGGTTAGAGGCTCAGGTCAGGGAGAGGCTAAATGCCATTCTAAGGAATTAATTCTATCCAATTGATGACAGAGATCCTCTGTGGTGAGTGTGGTCACACAGTCATTTTGGCTCATTACTTTGAAAGTGGCATGAGATGCAGCACAAGGGGTATTGAGAGTTTATAGTGATAGACACGCACATGTAAAAAGAAAGAGATCTTGAATAAACGACCTAACTTCAACCTCGAGGAACCAGAAAAAAAGAGCAAATTAAGACCAAAGTTAGCAGAAAGAAAAAATAAAGCAAGGGCTTCCCTGGCAGCTCAGTGGTTAAGAACCCACTTGCCACAGCAGGAGACGTGGATTCAATCCCTGGTCCAGGAAGATCTCACATGCCACAGAGCAACTCAGCCTGTGCGCCGCAACTGCTGCGCCTAGGCTCCAGAGCCCAGGAGCCAATCCCTGGTCCAGGAAGATCTCACTTGCCACAGAGCAGCTCAGCCTGTGCACCGCAACTGCTGCGCCGAGACTCTGGAGCCCGGGAGCCACAGCTATCGAGCACGTGCGCCACAACTGTTGGAGCTGGAATGCTCTGGAGCTCATGTTCCGCAACAAGAGGAAGCCGAGGCAAAGAGAAGCCCTCACACCACAATTAGAGAGGAGCCCCCACTCCTCATAATTAGAGAAAACCCTGCATAGCAATGAAGACCCAACATAGCCAAAAATAAATAAATAAAAATTTAAAAATGAAAAAAGAAAAAATGTAGAAATATAGAATAAAAATCAGCAAACTAAGAATTCTTTTTTTTTTTAAAGAAACAAAAATGGACAAACCTTTACCTAGACTAAAAAAAAAAAAAAAAGAGAAGACTCAAGTAAGTAAAATCAAGAATGAAAGAAGAGACATTATAATGGATGCCTCAGAAATAAAAAGGATCACAAGAGACTATAAGCCAACAGGCTGGATAACCTGGAAGAAGTGGATAAATTCCTAGAAACATTCAATGTATCAAATTCAATCAAGAAGAAATAGAAAGCTCGAACAGACCAACAACAGCATGATTTTATCAGTAATCTAAAACATCCCAACA TCONS_00213797 TCONS_00213798 . 3' 26970 TCONS_00213797 TCONS_00213798 . 3' 28355 EMBV3_11316 CAGCGGGACTCTGTTGACGCCATAAGTATGGTTTCCTTGGGCCCTCAGAGGAGCGCAGTT Variant GeneID:508521|AGTRAP:NM_001075363:49_cdna 219^393 3 EMBV3_29671 GeneID:508521 16 GENE AGTRAP MGC140564 angiotensin II receptor-associated protein EMBV3_24726 CCTGAGCACATGGGACAGCGGCCCACATATTAGACGTGATGGCTGTGAGGGGATTTCAGA Gene BVT0102_432509 + 1 EMBV3_24397 GK000029.2:45018615-45029459 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165478 1 XLOC_100536 Coding TCONS_00165478 XLOC_100536 Coding Coding RIN1 29:45028266-45034780 = TSS123600 4206 1 TCONS_00165478_1 790 0.0684736091298146 10 0.355750038384769 0 1.74267888040284e-10 1.75968944228031e-10 0 0 0 0 0 1.27363342230651e-10 3.15483807922288e-05 1.88813528047078e-06 0 0 0 6.68777536310471e-11 5.65155219670141e-05 0.000390779932814619 0 0 0 4.86469568985575e-11 0.000199366530969847 0 7.17455495675576e-05 0 0 0 6.28013308947234e-05 2.30842057085588e-05 5.60342882759296e-05 NM_001192217.1 RIN1 Bos taurus Ras and Rab interactor 1 (RIN1), mRNA. 0.0 5434 100.00 0.716119828815977 NM_004292.2 RIN1 Homo sapiens Ras and Rab interactor 1 (RIN1), mRNA. 0.0 2729 84.96 0.576557299096529 TCONS_00165478_1 sp|Q13671|RIN1_HUMAN RIN1_HUMAN Ras and Rab interactor 1; 0.0 1149 83.42 0.99873417721519 2 coding 0 0 0 0 0.00541924241529845 0.967416120333071 -0.00882404702458944 0.882632252988594 ATGGATACCCCCCGGGAGCCAGGAACAGGCCCCCTCGGAACCCCCTACCCAGCCAGCTTCGCTTCTGGGCACCTGGAGAGAGAAAAGCCAGCCCAGGACCCACGGTACGATGTGCCTGGTGCCGGTGGGGTGCAGGCAGGTGGATCGCAGCGGCCAGGGCGCACCGTGAGCCTGCGGGAGCGCCTGCTGCTCACCCGGCCCGTGTGGCTGCAGCTGCGGGCCAACGAGGCTGCCGCGCTGCACGTGCTGAGGACCGAGCCCCCCGGGACATTCCTGGTACGGAAGTCTAACAGTCGCCAGTGCCAAGCCCTGTGCGTGCGGCTGCCCGAGGCCAGTGGCCCCTCCTTCGTCTCTAGCCACTGTATCCAGGAGACTGCTGAGGGCGTCTCCCTGGAGGGCTCAGAGCTCGTGTTCCTAGACCTGGTCCAGCTGATCTGTGCCTACTGCCACACCCGGGACATTCTTCTCCTCCCGCTTCAGCTCCCCAGAGCCATCCGCCAGGCAGCTACCCACAAGGAGCTGGAAGCCATCTCCCATCTGGGCATGGAGTTCTGGAGCTCCTCTCTCAACACCAAGGCTCAGCCAGGCCCATCGGAAGGCCCCCCGCTGCCCCGGCTGAAGCCCCGGCCCCCACAAGAGCTGGACCAGGGCACTGGAGCTGCCCTGTGTTTCTTCAACCCCCTGTTCCCAGGGGATCTGGGCCACACCAAGCGGGAGAAATTCAAGAGGAGCTTCAAAGTGCGTGTGTCCACGGAGACCTCCAGCCCCCTGTCTCCCCCAGCTGTGCCACCTCCCCCAGTCCCGGTGTTGCCAGGGACAGTCCCCAACCAGACAGAAAGGTTGCCCCCTCGCCAGCTGCTACGGAGGGAGAGCTCGGTGGGGTACCGTGTGCCAGGGGGCGCCGGCCCCAGCCTCCCGCCGCTGCCCTCCCTCCAGGAGGTGGACTGCGCCTCCCCCAGCAGCTCAGAGGAGGAGGGGGGGGTGCCGGGGTCCCAGGGGAGCCCAGCGACCTCACCCCACCTGGGCTACCGGCGGCGGCGGCGGCCCCTGCTTCGGTCCATGAGCGCTGCCTTCTGCTCCCTGCTAGCGCCTGAGCGGCAGGTGGGCCGGGCAGCTGCGGCGCTGACGCAGGACAGACACACGGCCGTGGGACAGCTGGTACAGGACCTGCTGACCCAGGTGCGTGCCAGCCCCGAACCCCGGGAGCTGCAGGCCGTCCGCGAGGCCCTGAGCCGGGCCCGAGCCATGCTGAGCGCGGAGCTGAGCCCGGAGAAGCTGCTGTCACCAGACAGGCTGGAACAAGTCCTGGAGAAGTCGCTGCACCGCTCAGTGCTCAAGCCGCTGCGGCCCATCCTGGTGGCCCGCCTGCGGCACCGGCTTTCAGCCAACAGCTCCCTGGGCCGCCTGGCTGAAGGCCTCCGCCTGGCCCGGGCCCGGGGCGCCAGCGCCTTCGGGTCCCACTTAAGCCTGCCCTCCCCGGTAGAGATGGAGCAGGTGCGTCAGAAGCTGTTACAGCTGCTTCGCGCCTACTCACCCAGCGCCCAGGTCAAGCGGCTCCTGCAGGCCTGCAAGCTTCTCTACACGGCCCTGAGGACCCAGGCGGGGGAGGGCGCGGGGGCCGACGAGTTCCTGCCATTGCTGAGCCTCGTGCTGGCCCACTGTGACCTTCCTGAGCTGCTGCTGGAGGCCGAGTACATGTCAGAGCTCCTGGAGCCTGCCCTGCTCACCGGAGAGGGAGGCTACTACCTGACCAGCCTCTCGGCCAGCCTGGCCCTGCTGAGTGGCCTGACAGAGGCCCACACCCTGCCCCTGAGCCCCTCGCAGGAGCTGCAGCGCTCGCTCAGCCTCTGGGAGCAGCGCCGCCTGCCCGCCACCCACTGCTTCCAGCACCTCCTCCGCGTAGCCTATCAGGACCCCAGCAGTGGCTGCACCTCCAAGACGCTGGCCGTGCCCCCAGAAGCCTCAATTGCCACGCTGAACAAGCTCTGTGCCACCAAGTTCCGGGTGACCCACCCTGATACTTTTGGCCTCTTCCTGTACAAGGGACAGGACTACCAGCGCCTCCCCCCCGGAGCCCTGGCTCACAGGCTCCCCACTGCTGGCTACCTCGTCTACCGCCGGGCAGAGCAGCCCGAGACCCCGGGGGCCTCACCTGGGGCTGCCACAGGGGAGGGCAGTGGGGGGCCAGAGGCAGGGGACAGGGAAGAGGACAAAGAGGGCCGGGGGACTGGGGAAACCAAGGCCAAAACCAGCCCCAGGGATGGCAGGGGAGAATCTGAGACAGTGGCCGAGGGGGCCGAGGACCAGGCCAGGGGAGACCCCACTCAGCCAAGAGGGCCAGAGACTGAGGAGAGCCAGGCCGCAGAGGAGTAGCTGGGAATGGACAGAAGGGCTGCGTGGGGCAGGAAGCTCGGAGCCTGCTGGGACGGCCTTGCAAAGTGTCAGCCTCGCCGGCCCAGGCCACAGCCCCCAGAGCCTCCCAACTCTGCTCCTGGTCTGCCACCACCTCTGACCCTCCAGCACACCAATCACACCTGCTAGACACATCCAGGGCACTTGGGTGAAGCCCAAGGGATCTGGGGGGCCCAGATGAAGGCCCTTGGCCTCTCCTCCTGCTCCCCCAGCTGGAAGCCAGGCAGCCCACAGTGAGGAGTGTGTCCAGCAGGGGAGAAATCCATCAGGGGCCCCACCTCTGGCGGCAGTGGGGAGGGGTGGGTGGTTCAAGGCCCAGAAAGGCCCCACCAATTTCCAGGTGTCAGGAGGACTCAGAGAAGCAGCAAGGCCTCAGGGCTCAGTCCTGCCCACACCACCTGCAGAACAAGCACCTCCGAACCTCAGTGTCCTCGCCTATAAAGTGGGGGTGCTACCGCTGCCCTGCCATCTCCCAGAAGCCTTCCATGGCTCAGAATAGATGGTTTTGTTGCAGAGCAGAGCACAGCTAGGGAAAGGGGAGAGAAAGAGGTTGAATATTAGCAAAACCCCCAGCTTGCGTATACACACGCCTCTCTGAAGGTCCATTCTCCACCCTCACCTAAGGGAGAGGTTCTCCAAGCGGCCCTGGGGGACATCCAGGGGGCCAGGCTCAGCCAAGGGAGCACCCCTGTTCCAGTCTTTCCCCAAGAGAAGAAGTCCTCCCAGGCACGCTGCTGTCCCAGGGGAAGTGGACAGGTGAGACAGCCTTCTGAAATGGAATGAGGACTCGGAAACTGTCTCTTCTGCACTGAAGTCTCTTGGACCTCACAAGAGGTTTTTCAGGAGTCAGGGTCTGATTTATTACCCACCGAGGCTGGGAAAGTGACTCCTAAGACGCCACACAGCGGACCATTAGACCAAACCAGGAGTCAGGTTCCAACTATGCCTCGTGTTCTAAGCCACCAATACATTAATCCTCAAGGTTTAGGGCTTCTCCGATGGCTCAATGATAAAGAATCTGCCTGCAGTGCAGGAGATGTAGGAGATGGGGGTTTGATCCCTGGATCCGGAAGATCCCCTGGAGGAGGAAATGGCAGGCAACCCACTCCAATATTTTTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTAGGCTACAGTCCATGGGGTCGCAGAGAGTCAGACCTGAGCGACTGAGCGGGAGGTTCAAGCAGACAGCAAATGAGCAAAGAAAATACCAGAGACCACCACAAGAGGGCACACGTGGCCCAGGAAGTGGCTGAGAGGGCGCCCTGATAGACTTCGGCTCCGGGGCTGCAGCGGTGCAGGTGGTCCTGGGGTTTGCAGTCTGGCAACCGCCAAGCAAGTAGGGGGCAGTGCAAGAGCCAAGACTTCTGGCCCTCAGCTCTCTTGGGAGTCTGAGGTCTGGATGAAGCTGGCCTCCGGGGACCACTCCCTGGGAAGGAACTAGGCCCCAGTGGAAGGAGGACCCTAGCCAGTCTCCGAGGGGCTCGCTCAGGCCCTGAGCACATGGGACAGCGGCCCACATATTAGACGTGATGGCTGTGAGGGGATTTCAGACCCTCCAGGTACAGCCCGGGTGCAGGACTCCCAAGTTTCTCACTAGGCCATCGGCAGCTCTCTGCCACCTTCCACCCCATCCCACGCACACACAGGCTGCTCCCTGGCGAGGGGTCCCCCTTTACTCTTTTGTATGTTCTCCCCACCCGCACCCACCCAGTGCCTTGTACAGTGCTGGGCGCTCCACTGGCGCTCAATAAATGTTGTCCACTG EMBV3_40438 GTACTAGAACAGCATCATATGTCACGTGCCTGGCATTGTTTAATCCCGTTGTCAGCTGGG Gene GeneID:100294771|LOC100294771:XM_002695968:300_cdna Constitutive 0 NULL GeneID:100294771 19 GENE LOC100294771 NULL similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa EMBV3_01681 TTTCCCCTCAAAGGGAGGATAGGTCTGGCTCATGTTTTCAGAGGCATCGAGAATAGACCG Gene BVT0102_210337 + 0 NULL GK000025.2:38934908-38953353 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145552 TCONS_00145546 TCONS_00145549 TCONS_00145553 TCONS_00145550 TCONS_00145547 TCONS_00145554 TCONS_00145551 TCONS_00145548 1 XLOC_088863 Coding TCONS_00145546 XLOC_088863 Coding Coding ZDHHC4 25:38951629-38962258 j TSS109048 3146 1 TCONS_00145546_8 200 0.15702479338843 7 0.704648099360181 3.31186704149616e-07 1.33977270942884e-80 5.12038723333334e-21 2.73507112433425e-12 7.01502266124127e-09 1.51248085372035e-33 3.93090199978556e-42 0.000159555190064819 2.11155443725042e-09 2.29838212669079e-05 3.98333496530349e-10 4.29960963000834e-14 1.64729489795966e-27 4.87173025049886e-09 1.85709845364937e-18 7.02174371732654e-05 2.61839380006196e-05 0.000226020990446657 8.95101542072497e-05 7.84020778454377e-13 0.000321879761344356 2.90393756106731e-05 0.000264226874259075 0.000482722620113889 8.96670591311571e-05 2.00502860920137e-22 0.000191713522368744 2.38522562743258e-20 1.55901201028178e-05 1.72308672091016e-05 XM_005225098.1 ZDHHC4 PREDICTED: Bos taurus zinc finger, DHHC-type containing 4 (ZDHHC4), 0.0 1312 100.00 0.230769230769231 XM_005249793.1 ZDHHC4 PREDICTED: Homo sapiens zinc finger, DHHC-type containing 4 (ZDHHC4), transcript variant X1, mRNA. 0.0 733 82.94 0.22822631913541 TCONS_00145546_8 sp|Q58DT3|ZDHC4_BOVIN ZDHC4_BOVIN Probable palmitoyltransferase ZDHHC4; 2e-148 421 99.50 0.995 1 coding 0 0 0 0 0.0400755483205625 0.808116832682757 -0.00359611563353525 0.954718695472372 GTGACCCCATAGACTATATAGCCTGCCAGGCTCCTCCCTCCATGGGAATTCCCAGGCAAGAATGCTGGAGTGGGTTGCCATTTCTTCTCCAGGGGATCTTCCCGACCCAGGAATAGAACTCACATCTCTTGTCTCCTGCTTGGCGGCAGATTCTTTACCACTGAACCACCTGGGCTTCCCAGTCCCTCAATACATTATTTGTTTAATAAATACATAGAAGAGGGGGTCAGAGGATGAAATGGCTGGATGGCATCATTGATGCAATGGACATGAACTTGGGCAAACTTCAGGAGATGGTGAGGAACAGAGAGGCCTGGCATGCTGCAGTCTATGGGGTTGCGAACAGTCGGACATGACTGGGTGACTAAACAACAATGTGTAAATGTATAAAGAGTTGTGGAAGATATACACTAAATAAGTGATTAATTCTGTCAAAGTACTGAGATTTGGGAGGGGTGGTGGTCAAGGAAAGTTTTCGTTCTGTATAGTTTGACTCTTTTACAAGGAGAACACAATATAGTATTACTTGCATAAATTTAAAAAAATGAAAGAAAAGCAGTCCAGCACAATATACCCTAGTAATCAAACCAAGATTTAAAGTGAGGCCCAAATGAAACCATCTAAAGAAAAATGAATGGGGTTAAAAATAAAACTCGGTGCTTATGAGTGATGAAAGCTGATCAAAATACTTAACTACCAGCTCAGAATTAACCAGCAGGGTGATGAGCCCACAGAAAACACTGATGAAATCCAGCCACTCCGCACACTTGATGTGGCTCCATCCATAACCACAGACCTCCCTGGTGCTATCATATTTTCTGATTTTTGGGTTTTGTTTCTCGATTCTGTGTCCTCAAGTTCATGAATGCCTTTCACATAATGTGTCAGAAAGTGACCAGCTTGGGAAGTTTTATAAAAAGAAAAAAAGAAAGAAAGAAGGAAAGAAGAAGAATCAATAAGCTGGGGGTATATAGCAAAGACAGGCAAAGAGAAGCGCTTTAATGTCCATGTTTGGAGATCACAGACATTTCCCCTCAAAGGGAGGATAGGTCTGGCTCATGTTTTCAGAGGCATCGAGAATAGACCGGTCTCAGCGGATTCTGAGGTGTCAGGGCAAAGGAACACCCCATAGGAGCCTTCTCAATGCTATGTTTGGAAGCAGCTTTTCTCTCTCCAGGTTCAACTATCATTAAACAACCTTCCTTCTTATCGTCCATATTTGGAGTCAAACAATCCTCAACCACCCAGGGGCAGGATGTTCAGAGCTGTTCTGAGACAGCAGGAGCAAAGCCACTGGAAAGGTTCAGACGAGTCCAAACGGTGCAACTGGCAGAAAGCAAAGCAAACTGTTCATCACGAAGACACAGTGTACGAGCGCCAAGGTGTGCCTGTCCTGGGCTGCCCCGGCCCCTGCACGGCTGGGAGCCCAGCCCTGACTGGGCTCTACTCAGATCAGCGGGTGGCTAGGTTTGCTTCACAACACCGGCGTCCTCACCCGCACCAGGCCTGGGACAGTCTTTTGTAAGATTTTTGACAACGGCTCTCCAAAACTGGACCTCCAGTCGTCGGTCTGGAAGTGCCCAATCGGGAAACTAGAGACGCCTCAAAGGGAGCAGAACGCCACAAACAGCTCCGCCCCTGCGGCCTTCCGCAAGCACTTCCGCCGGAAGTCGAGCGGGCCAACAATAGCGTCGCATGTGACGTCACGTGTCCGCCGGAAGTCTGGGGACGCGCCCTGGAGGCGCCGGCCAGGGCAAAGCTGGTTGTTGGCAGATCCCGGCGCCAGATCCAGCCTCCTAGGGGAACCATGTCTCCCGTAGCTTTGGGTGCCACTCGTTGCTCCAGGCGCACGCCGCTGCGCAAGAGGAGATGCCGTTTGAGTTCTCAGTGAATGTTCGGAGGAGGAACGCCAGAGCTGTCGGCTGAAAGCTATCCAGATAAAAGAAATATCCCCAGGATGGACTTTCTGGTTCTCTTCTTGCTCTACCTGGCTTTGGTGCTGCTTGGTTTTGTGATGATCTGCATAGGCTCGAAAACCCATTACTTGCAAGGCCTGATCAGCAGAGGAGCACAGGTATTTTCATATATAATTCCAGAATGTCTTCAGAGAGCCATGCTAAGCGTGCTTCATTACCTCTTCCATACAAGGCACCATAACAAAAGCAAATGAGTTACTGTTCCTTCAAGTTTATGAATTCGATGGAGTGATGTTCCCGAAGAACGTGAGGTGCCCTACTTGTGATTTAAGGAAACCGGCGCGGTCCAAGCACTGCGGTGTGTGTAACCGGTGTGTGCACCGGTTTGACCATCACTGTGTGTGGGTGAACAACTGCATCGGGGCCTGGAACACCCGGTACTTCCTCTCCTACCTCTTCACGCTGACGGCCTCGGCTGCCACCATGGCCGTGGTGAGCACCGTGTTCCTGGTCCGGCTGGTGGTGATGTCAGACGTGTACCTGCAGACCTACGTCGATGACCTCGGCCACTTGCAGGTTGTCGACACTGTCTTTCTTGTTCAGTACCTGTTCCTGACCTTCCCAAGGATCGTCTTCCTGGTGGGCTTTGTCGTGGTGCTGAGCTTCCTCCTGGGGGGCTATCTGTGCTTCTGTCTGTACCTGGCCGCCACCAACCAGACCACTAACGAGTGGTACAAAGGCGACCGAGCCTGGTGCCAGCACTGTCCCCACGTGGCCAGGCCCCCAGCAGCGGAGCCCCAGGCCTACCGGAACATCCACTCGCATGGGCTTTGGAGCAACCTTCGGGAGATCTTTCTACCTGCTACTGCATGTTACGAGAGAAAGGAGAAATAGGGCTGGGAAGAGTGCTGCTGCCTTTCAAATACAGTCACATTTATTTATACACGTGGGTACGCTGTAAGCGTTGGTCTATTTGTTTTTCTGGTTTCTGCTGTGTTTATGAGTTGGCTTTCAGTGGCTAAGGAGAGGAGGGGAAATTAGTATTTGCTGGGTGTCTAATCCTTGCCAGGTACCCTGCTAATAAACCCTTTTATCCTCTGTTCAGTCAGCTGGCTGAACAGAGCATCCCTGAAATCCTGGTGCCAAGGGACTCAAAGGTGACTTCTCAGAGGTTCCTCTTGACCTTGGTCTCAGGCTGGGCACCTAGATGGGAGGGGCCTTATGGCTGTG EMBV3_40552 CACCACCTGCAAGCCAAGGAGAGAGGCTTCAGGAGAAACCAAACGTGCTGACACTTTGAT Gene BVV0102_259439 + 0 NULL GK000021.2:46485541-46708175 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26085 CAAGCCCCAGAATCTCGTCCTGGGTGATGTTTTTGTTGTCAGTTTCACTCTTGGTAGTCT Gene BVT0102_278830 + 0 NULL GK000005.2:97582323-97612240 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195992 TCONS_00195993 1 XLOC_118194 NonCoding TCONS_00195992 XLOC_118194 NonCoding NonCoding - 5:97584586-97600686 - TSS145923 2236 2 TCONS_00195992_7 79 0.225402504472272 3 0.861295732654202 0.000554618172006868 0.00136155758233082 0.000344069321850904 1.92697313056783e-05 0.000111757673113719 0.000432395049789562 0.00024572640658859 0.000418846019513169 0.000433662640730015 2.49985838898496e-38 0 1.54446376296864e-05 6.33711795642245e-05 2.22993900850956e-05 3.79085600665941e-26 0.000536301652316152 0 4.70529875717118e-117 0.000906187835051538 0.000804069325448571 7.96436817669612e-05 7.33986358666193e-39 9.29951504764253e-62 1.61425306615456e-23 7.72619424583235e-05 0.000167168628588129 0.000736016748534554 0 7.38178009714597e-05 1.90901149307162e-06 XR_231190.1 LOC101901926 PREDICTED: Bos taurus uncharacterized LOC101901926 (LOC101901926), 0.0 2026 100.00 0.501788908765653 0 noncoding 0 0 0 0 -0.211206656509771 0.359725205688113 0.000540555524295966 0.993572388340944 CCTTACTTCACAATCCCTCTTGGTCTCCAGGGGAAAAAAAATTTTTTGTTTTCACGGTCCTTAAAAATGTATTCCTTCTGTCGCTCCCAGGGTTATCTTTCCAAATACATAAAGCCCATCACTCTGGTTTTAAAGCCCGAACGGCCCTCCCATGTCCACTCCTTTACTACTCGATTCGCTGAATTCTCAGAGAATTCACGGCAGACACACAGTAAGGAAAAGAGGGACGACCGTACAAGCATGTGGAGTAGTTGCTGCAAAATCTCGAAGAATCTAGTGTTGTGTGCTTGAATCCATCGCGTCAACGTGAATTATCCTCCGACCTTTCTCGACCTCTCAAGCCTAACTAGCTTGACTGTTATTTACCAAAAAGTTTCAAAACGTTTTCGCGCTTAAAAGAAAAAAAAAAAAAGTCAGGCGCACGCGCAACCGCACACAGTTGTGGGGGGCGGGGGTTGCTGTTCGCGCAGGCAAATCTCGCGATGTTTGAGCCAGACCGGAGAGGAGCGTTTTTTTAATGGTGTTGTGAGGCTTTTCCCCTCTCCCCTCCACCAGGTGCAGTGATTTAATGTTGTAATCAAGTTAAAAATATGAAGACTCCACGGCGAGAACAAACGAGGCTAGAAATAGGCAACACGCCAGCGGCTGTTTTCCCTTCTAGGAAGGGCTTCTTGCGACGCCTCGAAGGCCCCACAAGTTCCTCAGAAACAAAAGTCAGAAGTATATAAAAACAGAAGCAGCCAACCACTGTATCACCTTAGAGCGGTGTGGAGATTCTTGTTTTTCCACTTTTTACTGTACGAAAAATCCCATTGGCTGCTAGCAAACCAGGTTACACGCCTGTCGCCACTGCGCCTGCGCTAGGCTTTGTTTACTACCTCGGACGGCCGCTGGGTCCCGCCTCAAGAGCTGGCGTGCATGTGGGATCTTACCTCTCCAACCAGGGATCAAACCTGCACCTGCTGTACTGGAAAGTGAAGTCTTAACCACTGGACCGCCAGGGAAGTTCTACTCTTGAGCATTTAAATATACCAATCCAAATTGAGATGTGATGAGGCATGTAGGATCTTAGCTCTCCCACAACGGATGGAACCCCCACCCCCTGCATTGGAAGGAGAAGTCTTAACCACTGGACCACCAGGGAAGTCCTCTGCTGTTCCCTTTATGGGGACACTACATGGCTGCTCTCTCTCAAGTCCTCAGAGCATCTCTCCAAGGGCACTCTCTCCATGAAGCCTTCCTGGACCACACTAGTCACACTGGAACCTCACAACACTCTCTTTCCCCCTCCTCTTGTTATTCTCCATAGCATGTATCACTTCCTTCCGCGGTATGTATATTTCACCCATGTATCACTGTGTATTTTCTGTCTCCTCTCCCCCTACTAGAGTGTAAGCCGTCATCCTAGTGTAAATCTGCTTGTTTACCTCTGTATTCCCAGAGTCTCGGATATCAAGGCACTCAGTAAATATTTGTAGAAAGAAAGAATAAGCAAATTAATAGAAAATGCTCAGTAAGTATTTATTAAATTGAATTAAAAGGGTCAGAAACAGACTGTGAAATTTCCAAACTCTAAAAATGTGTCGGTTTAGGAGCATAGTGAAATTGAGCGAGCGTCGCCTCACCGTAAGCATCCTCGAGGAAGGATTAAAATCGTGTGCTCGAGGTGGGAGGGGCAATGGGGCCAGGAAGCGTGCGCCTTCGCAGAAGTTTTGGGGGCTGCCTGACTTCCCCCCTGCGAGGAACTGCACCTGGGAGGCGAGCTTGCTGAGCCGCCCCGCCGGGACATTCGGCTACCACACAGGTGTTTTCCTTTAAGTAATTTTGGTCTTCGTCTCTCTCCTAAGCTGTTAAAGGACACACACAAATCTTGGGTGGCTTATGAGCCACTTCTCAGCTCTAAGGAGAAGACTACCAAGAGTGAAACTGACAACAAAAACATCACCCAGGACGAGATTCTGGGGCTTGGGGGCAGCCGAACCCCCTTTATCAGAGCAGCGCGAGTGTAACTTTCTGTCTTCTCCCAGGCTCCGCCTTTAGGCTGTTTATTGGAAATTCTTCTCCCGGGCTCAGTCTTTTAAAGCCGCCGCCTACTGTCCACAGGAGGATGGCGCTCACAGCTCCGGGTTCTCTTCCCTCGGGGACTCCGTCGTATTTTTTTCACGCTTCGACGCTACTACAGCGGACGCCTGCCCTCTCACTATTTGCCCCGCAGTTCTACGGTGCCTTGACTGTA TCONS_00195988 TCONS_00195989 TCONS_00195990 s 5' 2265 TCONS_00192902 r 5' 0 EMBV3_32835 ATGAGAAAAGATGGGTGCAATAACTGGCCCATGAAGATCAGAGCTGAGGGCAAAGCGGGG Gene GeneID:100138376|LOC100138376:XM_002694253:228_cdna Constitutive 0 NULL GeneID:100138376 16 GENE LOC100138376 NULL hypothetical protein LOC100138376 EMBV3_06634 CTACTCAGAGGGGCTAGAGAGCCTTCTGCACACCTCGTTTCTTCACTCTGGATTTTCAGA Gene BVT0102_304124 - 0 NULL GK000024.2:8859700-9740821 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068492 TCONS_00068491 TCONS_00068488 TCONS_00068489 TCONS_00068487 TCONS_00068490 TCONS_00068493 1 XLOC_041710 Coding TCONS_00068491 XLOC_041710 Coding Coding RBBP5 16:2693744-2734079 j TSS51280 3631 1 TCONS_00068491_2 500 14 0.910323796300888 0.00246843080640177 0.00330166199948941 0.0039791151356895 0.00194367618332829 0.00262131125260841 0.00230424688983996 0.00146004348801497 0.00412139210543816 0.00511321396517034 1.30674954832658e-18 1.00657516435936e-09 0.000160672330319407 0.00055077513976392 1.07838560350526e-07 2.28969859571996e-05 0.00480550213118696 0.00176698184879732 7.56280033762164e-09 0.00154386542091874 0.00205813479803138 0.00117846280687215 0.000726967329042038 9.23759534592623e-05 0.000522718735176675 0.00221896253019798 0.00141494202503583 0.000549148700850468 0.000253220614471737 0.000234182619787191 0.000937435165372003 XM_005216666.1 RBBP5 PREDICTED: Bos taurus retinoblastoma binding protein 5 (RBBP5), 0.0 6524 100.00 0.99586890663729 NM_001193272.1 RBBP5 Homo sapiens retinoblastoma binding protein 5 (RBBP5), transcript 0.0 3526 86.88 0.800055081244836 TCONS_00068491_2 sp|Q15291|RBBP5_HUMAN RBBP5_HUMAN Retinoblastoma-binding protein 5; 0.0 1016 99.80 0.982 1 coding 0 1 1 0 -0.190230956979179 0.575303025976132 0.00938015032146458 0.860365598508276 GAGGCAGGGAGTCTCCGGGGCCTGCGCCGGCGCTCTGCGGCGCCCCCAACTCGGACGCGGGCTTCGCGGGCGGGCGCGGGCGCGGGTGTCGTCGCTGAGCCGAGGCCGGGCGGCCGGAGTCCTCAGGCATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAGAATTATCCAGAGGAAGCTGATGGAACTTTGGATTGTATCAGCATGGCCCTGACTTGCACCTTTAACAGGTGGGGCACGCTGCTTGCAGTCGGCTGCAATGACGGTCGAATCGTCATCTGGGATTTCTTGACGAGAGGCATTGCTAAAATAATTAGTGCACACATTCATCCGGTCTGTTCTTTATGCTGGAGTCGAGATGGTCATAAGCTCGTGAGCGCGTCCACTGATAACATAGTGTCACAGTGGGATGTCCTGTCAGGCGACTGCGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAGTATCATCCACGAGATCAGAACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTCGTTCTGCCCGTAGACGATGACTCCGATTTGAACGTGGTTGCATCTTTTGATAGGCGAGGAGAATATATCTATACAGGAAATGCAAAAGGCAAGATTTTGGTCCTAAAAACCGATTCTCAGGATCTTGTTGCTTCCTTCAGAGTAACAACTGGAACAAGCAATACCACAGCCATTAAGTCAATAGAGTTTGCCCGGAAGGGGAGTTGCTTTTTAATTAACACAGCGGATCGAATAATCAGAGTTTATGACGGTAGAGAAATCTTAACCTGTGGAAGAGATGGAGAGCCTGAACCCATGCAGAAATTGCAGGACTTGGTGAACAGGACCCCGTGGAAGAAATGCTGTTTCTCTGGGGATGGGGAGTACATAGTGGCAGGGTCAGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTAAAGATTCTCCATGGGACCAGAGGAGAGCTCCTCCTGGATGTAGCTTGGCATCCTGTTCGACCCATCATAGCGTCCATTTCTAGTGGAGTGGTATCTATCTGGGCACAAAATCAAGTAGAAAACTGGAGTGCATTTGCGCCAGACTTCAAAGAATTGGATGAAAATGTAGAATATGAAGAAAGGGAATCAGAGTTTGATATTGAAGATGAAGATAAGAGTGAGCCTGAACAGACAGGGGCTGATGCCGCAGAGGACGAGGAAGTAGATGTCACCAGCGTGGACCCTATCGCGGCCTTCTGTAGCAGTGATGAAGAACTGGAAGATTCAAAGGCTCTATTATATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTATGGCCCCCCACCGGATGCAGTCCAAACCTCCCTGATGGACGAAGGGGCTAGCTCAGAGAAGAAGAGGCAGTCTTCAGCAGACGGGTCCCAGCCACCTAAGAAGAAACCCAAAACAACCAATATTGAACTGCAAGGAGTACCAAATGATGAAGTCCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGCAGGAGGAGCAATCTCAGAACTGTTATGAAGACCCTTGAAGTTCTTCATTCTTCCCTACTTTGCCATCATGTGGCCTCTGGACACTGTGGTCAGTCATCTGAGATTGACTTTAATTTAAAACAAAGGCCTCTGTCTTCCACCCAGGAGGTGGAAGGAGTGAATTTTATGTTTGAATGAAGAAGTGAATTATGGAAGAAGAGTATATGTCCCTTCCCTTTCAAGCATAAGTCCAAATAGACTCTCAGGAATGAGGATTTGTGAAGACATCAAACAGGAGTTTTGACTCTTTAAAAATGCTCGTTATGTTGCTGGAGGAGATTGCTGGTCTGCTCGTCTGTCTTCCCTGTACCCAGCACCGTTTCGGCTTCTCACTTCCTATCTCCTACTTGCCTTCGCTCCTCAGTGCATGTCCTTGAGTGACTTACTTTTACCTGAAATTTTGCTGCCTGTATCCTAGAAAAAACTTCGGTTTGCACATTCTTTCTTCCATTTTAAAGTTACCTACTCACCAGATGCCTCCTATATTTCCATAGTCTGTTACAAAGGACGGGCAGAAAAGAAAGTGCTTGGAGATTTCAGATTTTCTGAGAGAGAGATAGGAAAGGCCCCCTCTTTTTAACATTCTGTAACATTTTGCTCAAGCTGGGCTGTAAGACGGTCAGGGTTTTTCTTGGTTTTCTTCTCATTGCATGTTTCTCTCCAGTATTGGTTCATTCAATCATGGTTTATGAAGATAGCTAGTTTCATTTGGTCTCCAGCAAAGAATCATTAGTAGTTTATATTGCTTTACCTGTACGGGCTTCCAGAGACAAAAACAAACCGGGGTGTCTCTGAACAAGCTTATTTTATACTGGGGTGGGGGAATCTATGCAAGGACTAAATAAAACCGTCCATAATCAAAGCAGCAACAACACAATTCAAATAAAAAATCAAGGAACCTTTTTTTTTTATCATTGCTTGTGGACATCTGTCCTTCCCATCAGTCATCGTGTTTCCCCACGCTCCTTTTCCTTCCTACGTGTTTCCAGTCACTTCCTTTCTGTGAAAGGTTGCTTAGCTTTTAAAATTTTTTAATTTTTGCTTTTGCTGTTCTTTGTATAAAAACTAGCAGATTGGATGGCTGTGTCCCCCAGGTGTTTGAAATTCTCTGAAAATCCAGAGTGAAGAAACGAGGTGTGCAGAAGGCTCTCTAGCCCCTCTGAGTAGAGCTTGAGCTAACTGGAAGTGCTCAGTCTGGATCATCATTTTCACGGTATTTTCAAAGGAGAGTTAAACACTGTGCTTATTGGGAAATCTCTGTTGGTTGGTGGTTGCTTCAATAGGTAGCCAAACAAGTTGATTGCTTTTTGGATTTTAGCATAGAAATCAAAGTAGAACACATCAGCAAGAGTCTCTTCCATTCCGTCTCTAGAACCAAAATGTTCAGTAGTTGAAGAGCTCTCCCTGAACCAGTGGCCAAATGTCTATATTTTTAGATGCCACTGTCTTTTCCTCAGATGCTCCTTTTGTGAATTTCATTTCCTATTTCATATCAGACCAGCGGTTGAGATTGGTAGGTGGGTCACTAGGCATGTTTTTGTTTTGCGGACATTATTTCCATTTCATTTCTCTCTCTACTGTACACTGCAGCAGTATGCAAACTGTGTGATACAGGCGGCCTCTGCCTTATTTCTGCAAAGTAGCCGGGTGTCCTCTGCCTGAGCATTTGGGTGTTCAGCCTCTGTCCGCCTCCTAAACTGGCTCCTGAGAAAATCAACGTCAGCCCTGCCAGGGTGTCTGGTAGCAGCTCCTAATAATTATTTATGCTTCTGGAATTGTTTGCAGCTCCTGAAACCTTGTGTCCGTTTCAGTTTGATTCTCTCGATTTGTACAATATATGCATATTCTTTTTTCCCTTCTGTCACCCTCCCCTCCCCTCGGCGTTTTTTAATGTCCTGTAGTTTTGTATGAGAGGAGACTTAGCCTCGGGTACTTCTTGCTGAAGCTTTAATGCTTTGTAAATAAAATCGGATGTTTATTAAAGAACAG EMBV3_32556 TGTTCAGAAGAAGAGAACCCCAAAACCCACCCAAGAGGGTGAGGATGAGGAGCAGCCAAT Gene BVT0102_208671 + 0 NULL GK000010.2:65657657-65747189 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017613 TCONS_00017612 TCONS_00017615 TCONS_00019262 TCONS_00017610 TCONS_00017617 TCONS_00017616 TCONS_00017611 TCONS_00017614 2 XLOC_009069 XLOC_009942 Coding TCONS_00017616 XLOC_009069 Coding Coding - 10:65707041-65719012 - TSS11997 1312 1 TCONS_00017616_3 233 3 0.890643274853801 0.00414748547826946 0.00474897721974375 0.00554049070425529 0.00264451620481916 0.00413631018626849 0.00143386946298372 0.00542090991227135 0.00465714537859129 0.00969962750086052 0.000829702080628011 0.000225523314633907 0.000125351046527505 0.00129800839588538 0.0021171539323076 0.00217498756292482 2.52548868374181e-35 3.04308431037712e-21 5.80226881055825e-22 0.0049114376984882 0.00319380825403601 0.00233163648072239 9.77995474270033e-19 7.07851715833983e-21 5.40013702387707e-18 0.00815205791209646 0.00699272678580049 0.00351719689566845 1.00660958995273e-18 0.000106020501612387 9.67698250249353e-18 XR_232659.1 LOC100848863 PREDICTED: Bos taurus uncharacterized LOC100848863 (LOC100848863), 0.0 884 80.23 0.728658536585366 XM_005260339.1 TPX2 PREDICTED: Homo sapiens TPX2, microtubule-associated (TPX2), 2e-124 450 76.11 0.46265243902439 TCONS_00017616_3 sp|A2APB8|TPX2_MOUSE TPX2_MOUSE Targeting protein for Xklp2; 2e-49 174 54.55 0.686695278969957 1 coding 0 0 0 0 0.340284406767474 0.473571264036633 -0.0057889139550385 0.919216214971228 GTGGGTGTAAAAGTGCCTGCAGCTGTACTCTGCGCCATACTCTGTTGGATGTGTGGATCTGGACTGGTGAGAGGGCCTTGTGGGTTGCTGTTCGTGATGAGGTCTTTTCTAGACCAGGAGATGACCAAGGTCCCATACAGACTGGCACAGACAGCACCCATGTGGGTGGGGGTCTGGGGAGAATGAAGACCATGGAATCACCTGGAAAGGATCAAGGCCTGGCTTCATCAGAAGGTTCTTCTTCCCATATACAGAAGATCCTAAAAAGTACTGAGAAGCAAGAGTCTGAGAAGCAAGAGTCAGAGAAGAGAATAAAAATGTGGCAAGAGGTGGTGGAAGTGTTGGAAACAAATGCAAAATCCAAGAAATGTAATCCTGTAGAAGCAGGGCTCTGCAAATTTAAAGCACAGAAACTGGATTCTGGAATTCTTTATGGTGGGTGCATTTTCCCTAAGAAACTGCCAGAGAAGCCACCCACTGTGCCTATTGGCTTTGATTTTGAAATGGAGAAAAGAATCAAACAGCGAGAAGAAGCAGAGAGGGTATTGGAGGATAAACACTTTAATGCGAAGCCTTGCCCTTATCCTATCCTGTTAGGTGTTGTGGGTGTTCCCAATAAGAAAGAAATTCCACTTACCATCCCCAGGACCCCTGCTTTTGTTCAGAAGAAGAGAACCCCAAAACCCACCCAAGAGGGTGAGGATGAGGAGCAGCCAATGGTGATCAGAGCTCAACAATTGCCCCATTATGGAGTACCTTTTAAGCCCAAAATCCCTGTGAGGAGAACTGTGGAAATATGCCCTTTCTCTTTTGATTCAAAAAGTCACTTACAGAAAGAGAAGAAAATAAAACAGGTGCAGAAAGGGGAGGTGCCCAAGTGCTAGGCGATTCCTTTGCCTCTTACCACCATTAACCTGCAAGAGAAGAAGATGAAGAACACAACTCAGGTTGAGCCTTCTGCTTGGAGCCTGGCAGAAGAGGTGCCTGAAGGCACAGACTTGGGTTCTCTCCGTGCCCCGGTGACAAAGAAGGCTCCTCCTGGTGTGATGGAAAGGGCAGCTCTGGTTCCTGGATGGTGTCTGCAGCCAAGACTAGTGGTGGGGTTGACTGGAGACCTTGGGTGGTACCCACAGAGTCAAGGGCTGCTCACATACAGTAATTTGTGTTGCTTCCAGCCTCCTCCTCTTTTATAAGTCAGAATATATAGTGACTTAGTTTGTAATTTATTCACTTAGAGTATAATTTTTACTGCTTTTATCCTTCACTTTTTATATTTAAATTAAAAAATAAAGATACTTGATTCAATTTATAG TCONS_00014403 r 5' 39071 TCONS_00014403 r 5' 28178 EMBV3_42513 TCCAGGAAGCCGACATAGTAAGCTCTAAGGACAGTGGTCATGGAGACAGTGAACAGGGAG Gene GeneID:531875|PCDH10:XM_002694345:92_cdna Constitutive 0 NULL GeneID:531875 17 GENE PCDH10 NULL protocadherin 10 EMBV3_30287 GGTTCTTGCTTCTCCTCGTCCCGGGCCAGGGTGTCCGCAGGACGCCGACGGCATGAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34476 CTGCAGGTGCTACTGTCCTCGATACTTTGTGCAGCTTCCAGAAGAGTCAGTTCTCAGGAA Gene BVT0102_289792 - 1 EMBV3_10682 GK000012.2:12495986-12741068 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034531 TCONS_00034534 TCONS_00034535 TCONS_00034540 1 XLOC_020703 Coding TCONS_00034534 XLOC_020703 Coding Coding AKAP11 12:12447897-12499718 j TSS25496 9845 1 TCONS_00034534_7 1905 12 0.810247008876882 0.00396709217315924 1.08981252501003e-09 0.00207982112478424 0.00186010356998861 0.00364124805267517 0.000891041897584782 0.00245590462129744 0.00175476868000611 0.00501826919094544 3.90125054977126e-08 3.84049770520646e-23 1.4016391923635e-08 6.1814587069903e-05 0.000315930835296489 0.00148687559740171 2.80780653806153e-06 2.6267655033105e-21 0.00114102747054131 5.47236058659325e-07 0.00259628907280981 0.000713348705622641 5.90642074183337e-06 0.000747027042352424 0.000642385355488193 0 0.000397920242441072 0.000290670378195951 3.20714669263141e-11 8.03737227322143e-09 1.75772540361263e-13 XM_612396.6 AKAP11 PREDICTED: Bos taurus A kinase (PRKA) anchor protein 11 (AKAP11), 0.0 1.737e+04 100.00 0.978161503301168 NM_016248.3 AKAP11 Homo sapiens A kinase (PRKA) anchor protein 11 (AKAP11), mRNA. 0.0 7176 82.74 0.707059421025901 TCONS_00034534_7 sp|Q9UKA4|AKA11_HUMAN AKA11_HUMAN A-kinase anchor protein 11; 0.0 2899 78.74 0.999475065616798 1 coding 0 0 1 0 -0.0229388286682831 0.856847209722058 0.0233137374884425 0.715425575867743 GGGGGGAGGGCTGGGGGCCGCTGCGGGAGGGGGGCGCCCGCCTCCTCGGCCGCTCCCGCCGCTGGTCGTTGCGGGCGGGTGTCATGCTTGTGAGCTGCGGAGGCTGCGGCCCCCCAGGTCTTTAGTGGATTAACTCTTCATTGATTACATACAACAGCAGAATAGTCATGGCGACCTTCCAGTCTTTCAGGAACAATCACATGAAAACTAGAGCATCTGTCAGAAAAAGCTTCAATGAAGATGTGTTCCAGTCTGTGAAGTCTTTATTGCAGAGCGAGAAGGAACTATGCAGTGTATCAGCCGAGGACTGTTTGAAGCAGGATGAACGTGCCAATTTGACTGAGGTCACATTTCTAGGTTTTAATGAAGAAACAGATGCTGCTCATATACAGGATTTGGCTGCAGTTTCTTTGGAACTCCCAGATCTTCTGAACTCACTGCACTTCTGCAGTCTAAATGAAAATGAAATTATTTGTATGAAGGATATAAATAAATCATCAGATATAAACAGTGATCCTCTAAACCAGAGTCAACATCCTGGAATGCTTTGTGTCATGAGAGTGTCACCTACATTACCAAGACTTAAAATTGATTTTATTTTTAGTCTCCTAAGTAAATACGCTACTGGCATAAGGTACACCGTGGACACATATTTGCATCACAAGCACCAACTTGAGGCCACCAGTGAGGACGACGATGATACTAACCAGTCTGTATCTTCCATCGAAGATGACTTTGTCACTGCTTTTGAGCACTTAGAGGAGGAAGAGACTTCAAAGCCATATAATGATGGATTAAACATAATTGCACTAAGGAGCCAGTGTGATGCTACTTCACAGACTATTTCTGGTCACCATTTGGATACCCATGATTTCAGGGTTCTGGTTGGCTCTGAGCAGCAGAAGTCATTGGCTAAACCTTCAGCTTCTTTAATAAACATTCTGGGACATAAAAAACTGCCTCCAGTGAGAACTTCAGTCACGACATCAGTCTCTGAACCATGGGTCCAAAGGAGTTTCTATAGTTCCTTTGCTGCTTCAGAGAAAGGTAGTGATGCCCAGAAACCATTGTTCTCGTCTTCTCCTGCCTACTCGTCTGAATCAGAGTGCTCAAGTCCAAGTCCTGTTATCTTCTTGGATGAAGAAGGTTATCAAAAAAGTTTGAAAGCAAAACTTGAGTTACCTAAAATTCCTGTGATGAAAGATGATATTGAGGATTCAGACTCAGAAGTGAGTGAGTTTTTTGATAGTTTTGATCAGTTTGATGAACTAGAACAAACGTTAGAGACTGCTTGTCCGTTTCTGAAAGATCTTGCTGTAGGGAAGCCATCGCAAAAGAAAGGGCACAAACATGAAAAATTGTGCTCTGTAACCACTACTATGAATCCTCAAAAATTCAAGTTTGATCGGCCAGCTCTCCCAGCTAACGTTAGGAAGCCAACACCTCGTAAACCAGAATCCCCTTATAGTAACCTGTGTGATGCCCCAGATTCTCCCCGCCCCGTGAAGGCCTCAGGGGAAGACAGTGGTTTGTTTAGTCCTATTCGATCCTCTGCTTTCAGTCCTCTTGGAGGCTGTACTCCAGCTGAATGCTTTTGCCAAACAGATATTGGTGAAGATAGGGGTCATGAAAATCCTGATTCTCTTTATTATACCTTTGAAGATTATGCAAATAGCCTTTCCTATGAAGTTCTGGGTTCAGTTCTTCATAGCCAACATACTAATGCAACATCCAACACTAATAATATTAAAAAGGGAGAAAATAAAATGGTAGCTCTTCAGCATGGAAGCCTTGATCAAAAAAGTAAATCTAAAAATAAACCCATAATGATTGATAGCATTCAGAAGTTTGCAGCAGATCTCGTGGAAAAAAGTTTTGGCAGTGCATTTAAAGACTTACAGAAAGGGGTCTCTTCATGTACCAATGCCTTATGCCAGTTAGCCATCAAATTGACGTCATCCATTTTTCAAATGGCATTTAACGAACTGAGAAGGCAGTGTGCTTTTTCACTGAAAGAACGAGCCATTAGTGGCCTGGCTAGTTTTTTGGTGAGTGAGGCATTCTCAGATGCTTTACAAGATCTACAGTATGTAAAGAAACAGATCTTCACTAACACCGTCACTAGATTTGCTGCAGATCTTGCTGAAGAGCTTGTTTTTGAAGGCATCATGGAAGTGTGTCAGTTCTCATATCCTCCAACACCTGCATCTCTGCAGGGTCGGTCATTTCACTGTGAAGACAGAGTGGTGAAGTCCTATGCAAGAGATCTGTCTGAATCTGTAATACAGGAAGCATTCATTGAGCTGTCTCAAGTTGATGTTACCTTTACCACAAAGGCAGCAGTTAGTGTTTCCCCAGAAAACATCAAGTTTGTGAGCACAGAAGATGTAGTGCCAGCAACACAGACTTCTGTGTGTTCCCCTACTTCTAACAGTCAAACAGTTACGGTGACAAAACCAGTGCAGGAGTATAAAAAGGAATACACGGTGCAGCAGGCCTTGCTCTGTACTTCAGGAATTGTTACTTCAATACCAGTGCCCTTGGCAGGGAGTGCCCTTCACCCATACCGTATTTCTTCTAATACGTATCAGACAAAGTCTCATCCATCATGTGATGATAGTCATTTGAACGGTGGTCCTACCCCAGCAAGTGTTGCCACAAAAAACAAAGAAGAGGAGCTAGCTTGTCTCAGGAATATTTGTTTACCTTCAGACCACAACCCCGGTAGCCAGAATGAGGTGAAACCAACTAGTGATGTTGTTGAAACAAAAAGCTCTTCAAAGTTAACAAATGATCCTGTCATTATTGGCGATTTTTCTGCCGCAATGGTGCATACGATAGTAAATGAAACTATAGATTCAGTGACATCTTCCAAAGTTGCAAAAACAGAAGAACACACAGATTGTTTAACTCAAACAGGAAAGGGAAAAACCCCTTCTTTCTACTGGGATCAAGCAACAGTGCCACAGAGTGAGGCTAGCAAGAAGGACATGTTCGCCGATCGGTTATCTAAATCTATTATCAAACATTCCATAGATGAAAGCAAGTCAGTGATCGTAAATGTAGATAAAAATGTCCTCCCCAAGAAAGACTTGCCTGTTCCTGGAGATGAGTCACAGTTGACCTTGGAAGAGTTCCCCAAGTTTCTTGAAGCTCAAGATCATTTAACTCACTGTTCACTTTCAGAAGTAAAGGATTGTGTTCCAGAAGGTAAAGGTTCTGTGGCTCCTGGATTTTCTTTGGAGACACTACCACCTTGTCTAGCAGCGGCAGGCCAGAAAGCTGATCTGAAGGAAATTGCTAAGGACAAATCTGTGAAAAAGCAGAATTTGCATAATTCAGCCCTCGAGCCCTTGGCTTTTGGGCAGGAAAACTCGTTTCCCCATTCACATGCTTTCTCATCCACAGTGCTCACCTGTGTAGATGGTTTGCACGTGGAAGATAAACAGAAAATGAGAGATGGGAATGTAATACCTGACACCCCTCCATCAACTCCTCTGGTTCCATCCCAGGCTCCTTCTGATTGGGATATCAAGAAGTTAACCAAAAAGCTTAAGGGGGAGTTAGCAAAAGAGTTTGCACCGGCCACACCACCATCCACACCTCACAACTCGTCTGTAAGCAGTTTGTCTGAAAATGAACAAAATGCAATAGAAAAAGAAGAGTTCATGTTGAAGCTCATGCGGTCTCTCTCAGAAGAAGTTGAAAGTAGTGACGGCGAAGAGCAGCAAGAGGTGGACGTGAAGTTGGAGCCAGCAGGGAAAAAAGTTCAGTTTGCAGACGCGTTAGCGACACACATCGTTTCTCTTGCAACAGAAATGGCAGCTTCCCATTTGGATAATAAAGTGATTCAAGAAGCCAGGGTGAAAAGCCCTTGCTTAAATGTGCAGAGTCAAAGAAGCCTATCACCTGCTTTTTTTAATTGCTCAGATGAAAGTTTACAGGCATTATGCAGTTTTGCAGGTGATATGGCAGCAGAAGTCATTACGGAAGCTGAAAAAATAGCAAAAGTTAGGAGCTGTATGTTTTTCAGGAGGAAGAGGAACAGTTGTGTTGATGGTGACCAAGATCATAGATCCGAAGAGAAGTTGGATGTAGAGGCTGTAGCACACCCGGGAGGAGTAGATCCGTTTGTTCTTCCTTTACCACCAAGTTCTTGTCTGTCAGGTCTAACGTACAAGTATCCCAGCTGTGAAAGTGTGACAGATGAGTATGCAGGTCACATTATCCAAATACTAAAACAGGAAGGTGGCAACAGTGAGTTAATAATGGACCAGTACGCCAACAGACTTGCCTATCGGTCTGTTAAGTCAGGATTGCAAGAAGCAGCTAAAACAGCCAAAGTGAAGTGCAGCTCCAAAATATTCCCTGTGCAGAGCTCACAGGTGAAAACCAACGATGAACTGTTACTGTTTTTAAATAAAGAACACCAGCAAGAAGCAGATACAAAAAGACAAAGCAGAAGTGCTGGAAGTTACCTTCATAAAAACCAGACTTGTGAGTGGACACGGGACACGTGCAGAAACGAGTGCTCGGAACTACGTAGTTTTTCAACCTGTCTTGCTCACAGCATCACAAGAGATGTTAAAAAAGAGCTGATGGCATCGACAGGTGGCTTGCCAAAATCCTTAACAGATTCTTGCCTTTATGAAAAAAACGTATGTGACAAAGATACTGAGACTCATGTCGGGCCAGAGTTTCCCAAGTCTCTTCAGCCTTCTTCACAGAATCACAGATTTTCTCAGAGTACAGGCAGCTTGAGTGGGTGTGGCTATGGAGAGACTGTCGTTCAAGCTATAGAGCAGTATGCTAACAAAGTTGTGGGCGACACTTTAGAGCTGGGTTTAGGATCTGCCACCTTCCACGTGTCTGAAGCCACAAAAGCAGTTGATAGGATTACTTACGCAGAAAAGCTGTCACCTCTGGTGGGTCAGGCTTGCCGATCCTGTGACCGTAAAGAGCTCCATGACTGCACTGGAAATTCGTCTCCTCGCTTTCCCAGACCGGATTCGCTTGCTGGTAGTAAGCCAGTTTCTCATTCACAGCTTAGCAGCTTCTATCAGAAATCTAGGATTTTTCATCTCGATGTTCCTCAAATTCACGTTGATCTCGATAAGAAGACAGTGCTTGCTGAGAAGATAGTTGCTGAAGCAATTGAAAAGGCAGAGAGAGAGCTGAGCAGTACCAGCCAGGCAGCCGACAGTGGGATCGGACAGGAAGGTGTCAGCTTTGCCGAGAGCCTCAGCACAGAGATACTGGCGTCAGCAGTGGTCAGTGCTGGACAGGCCATCAGCAGTCCAAAAGAAACAGAAGAGATTCAGTCAGCTGAGTCTCTTGGTAGCCAGCAGATGCATCTCAGTATTGGTGAGGACAGTACTGGGAGCTGGTCCAACTTAAGTTTTGAAGATGAACACCAGGATGAAAGCAGTAGTTTTCACCATCTAAGTGAAAGTAATGGTAACAGCAGTAGCTGGAGCAGTCTTGGTTTAGAAGGAGATTTGTATGAGGACAATTTATCCTTTCCAACATCAGACAGTGATGGGCCAGATAATGATGAAGAGGAGCATCAGACTGATGTAGAAGGTTTGGAGCAAGATGGAAAGACTCTGCTAATTACAAATATTGACATGGAGCCATGCACAGTAGACCCCCAGCTAAGGATTATTCTTCAGTGGCTCGTTGCTTCTGAGGCAGAAGTTGCAGAACTTTATTTTCATGACTCTACAAAGAAGGAGTTTATGCAACTTACAAAACGGCTACAGGAAAAAGGGTGGAAGGTGGGAGACCTCCTGCAGGCTGTGCTTAAATACTATGAGGTGGTGGAGAAGACATCCAGTGAGGAGAGATGCAAGTCCCTGTTTGATTGGCTCTTGGAAAATGCATAGAACAAACTCCAAACCAGTAAATTTTATTATTTGTTTTGGGAGAGGAAGAAAAGACACATAGGGTAAAATTTGAGTAGTGAATATTAACATTTAAAGTGAATTGGGAGGAAAGTAAATAGCTATTAAGTGTGTTGTGTCATCATATGGTGTATATAGTTCATACTTTCGTAATCTGTCAGATATTATCTTCATTTATTCTTCTGTACACATGTGCAGTGTGTTAAGTAAGACCTTAAGAACATGTATTTGAAGGAAGGTCTGACTGTGAGGCTTTCAGGAACATTGACTGATGACAGCGTTCTTTTCGCATCCAAATAGTGCTGCTAGAAATTGCACTGAGGTGGCTGAAGGTGGGTTCCAGGGATAAAGAGTTATAATTTTGCTCCTTTACAAGCAAATGGTTTCCTGTTAATAACAAATCTGACATCAAAAAAAACAGCATTGAGGCTAATTTATTTTTCTGACATCTTTTTCTATTTTTAAGGGTCAGTTTTATTTTCATGGTTCAGCTATTGGTATTTTTTTGAATCCCCCAAGTTATTTAATTTCTTATAAACTGTAGTTTAGGTTTCTATAAATACTATAAATGATAGTTTCCCCAGCCTTTCATTAAATGATCTTATTTGCTAATGTTTCCAGTTGTTCTGGCATGAAAGTGAGTGAGTGAGTGTGTGTGTGTGTGTGTATTTGTGTGTATGTAAAGGAGAACTTAAACCTTGCTAGTGGTGGGTACCCTCTTTTATTTTACTCTTTTCTGGTCACAAACCCGCTGTTAACATTAAAAAGGTGCTTTAAAATAAAATGTCTATAAAGATTGTGCAGTAAGAATTTTTCTTTTTTGACTATTTTGAGTCCCCACCTTATTCTTTAAATGAAAATAAAGGTGCAAAACATATTGAAATTTTAAAACTTAATGTTCATTTGGAAATGCATTTAGAGAAGCCCAATAATTGTTTTCTCTGTTGGGATTTTGAAAACCTTTAGCAAGGATTTTTAAATTAAAACTCCACTTTAGCAGGGATAAGCTTTTTCTAGGAAAAACGGGACCTTCCCACCAACCCCTTCCCCAGTAAAATGTATCTGTACTGTTTTGTAAAGTCCTCTGATACAGTCTTTCTGGGCTCTGCATTTTGTTCCACTCGTCTTTAGTAACTGCGAGTTGACTTGAATAGAGGACCAGGATTGTGTTTTGTATGAGGGTATGTGCATGTGAATTTTTGATTCTTCCATTAGCAGATTTTTAATTGAGAGGAAATCATTTTTGTTGAAGGCTTTTGGTTTTGCTCTCACTTTTTCTTTTTTTCCTGAGAACTGACTCTTCTGGAAGCTGCACAAAGTATCGAGGACAGTAGCACCTGCAGGGGACAAGGAACAGGGCACTTGCATTGATTTGAATTACAGTTATGGCAGGAAATCATTGCTTCTTAAGAAAAATGCCAAAATCTATTTAAATGTTTTGAGGTTACACTTACAGAAGCTTCTATTTTTCTCAATTTAAGATGAAGAAATAGAGCAGGCCTTAAAAATAAATTTTGCTAAAGTTTCTTCGGGCATTTTTTAAGGTTGGAGAAATGTAGGAAATGTATGTAAGCAGAATTGATTCTGTCTTTAGCTTCTTAGAATTTGATCTGCAGCAGCACTGGACTAGGTTCTTAATTGTTAGGAAGCAGGTTGTTATAACATAGATTAATTGATTATTAAGCTTAGGTTGAATTTTTACAAGTGTATAGCTATCAAATTGTGTTTGGTATTTTCACTGTATGTACGGGTGTTATTAACAGCAAAACTGAGTTCTGAATTTCTTTTAAGCTAAAGTGACAATATGTTAGTTCTGTAAAACTCTCTACTTGAAAACGTTGATTTCCTGTATGGTAAGGTTTTCCTCCTGTCTTTGTTTTTGTTCGTTTTCTGGAGCTGTGCTGGATTCCGAGTTCCCTGTTCAGCCACTGTGGCCCAACAGACCAGTCCTTGGACCCTGGTGTGTATAGTACTGATGACAGTGGAGCTCCACACATAGCGGTTCAGTGCAGGGATGTAGAGAAAAACGTTAAACGTTGGCAAACGTGAAAAGAAGCGGGAGTTAAGCTTCCTTATATAGAGAGAGAACATTGGAGTTTAGAACAGTATCTTTTAATCAAGAACAGTCTAAACTTACTTTGTTTAAAGGCACTTTGTGATTTTTCCAAAGATGTAGATCTATTTGGTTGCTTAGCCTTCAGAACAGATCTGTTTGTCGAGGACGACTCTTATTTTGTTAAAAATCTATTTGATGTAATTTTATTATGATACTGTAATATTGCCATTCTGCATACTTTGGCCCTTATGAATATCATGTCTTACAGAACTGTTAAAGTTGTGATGTGCTTTGGGTTGAATTTTCTGTTTTATCAGTTTCAGAACCATTGGAGAACTGTGAAAAAAAAGTGAAGGAAGCCTTGGATGGGGTTTTTAGAACATTGTTTCAGATGGAACTTCTTTTTCCAAGCCAAGTTTAAAATTCCATTTATATTTGGGGTATTAACTCATTTTGATTTTGATTTATTTCCTGATTTTCACAAAAGGAATGATTCATTTATAAATCACAGAAGAACATTACAGTATCTCTGGGATGGTTTAACACAGTTTAATGGTTTAATGGAGTTTTAAAATCTTTGAGAACATTTACTCAGTGAATATATGTGATAACATCTTCATAGTTTGACAACCATTCCATTTACCCTTTTAGATATTTGATAGGAATTAATTCAACTCATAATACTTCCATTTTGCTTAAATAAAGGTTTTATTTTGCTGGTAGGAGAAGTTAGTTATTAAATGCACCAGGTATAAAGTAAAAGATGGTTTACCCACGTGGTTTTGATATCACGCACATTCCCCAGATGCAGTGTTTAACCTTGACTCATCACCAGGGTCTAGACTCAGATTAGTAAATATTCCTCTCTCACAATTAAAATGATCAATTTCCCATCAGTCTGTTGCTTTAAATTTTATTTCTTCAAGAGAAACTTTCCACAGAATTAAGAAAAATAATAATGCATCCATATTCAGGGTGTAGGGAAAATTCTTTCCATTTCAAGCTCTGTCCACCCGTCACCAGCACAAGAGAAGTAGAGCTTCCCTGGGAATTACGAAGCTGTGCTCAAGTGAAATGCTTTTTTCCTCACTCTCGTTTGAGGCCCTGCATACATTGACTAACTCACCGTATTCCTGCTCTGGAGATGCAGACGCAGTGTTGGTCACACTTGTCACTTTATATATTTATTTTTTTTCTACCATCCATGTACATTCCTTTCACAGGGGTAGAATCATAGGTCTAGAAGTTCATTGTCTTGTTTTTTGTTGTAATGTTTGAACACTATTTAATATCAGGTTTTAATATTGCTGGATTTGCTACCTTTTGTTACTTGTGCAGTGTTAATAGTAATAATTCACATTCTTGTTTAATATACCAGCTATAGAGCAAAAGCAGCTTTGAATAATTATAGCTGTTTATTTGACTGTGCTGAATTATTCCGTTAAGATCTTGTATAACAGTAACTTTTTTCTTTTGCTTTTTCAGTAATTTAATATGTTCATTTACCAAAATATGAACTTCAGGATGCACTAAAATTTTGTTTTTGCAGTGGCTCAAAAATAAACATTTCAGAAATTACTTTTGTAATAATTTGCGATCAATTGTTCTTTTATTTTTTCCAATTGTTTAAGTCTGTGATGTTTCTCTCCCAATTAAGAATTTCCCAATAAACTTAAGAGATGCCTGACTTTGGTTTTCAATCTGTAGTATCTTGTTAACACACTCAATACTGGACTAAAACAAAAGCATAGAAGGCACATCAAACAGCCTCTACGTTTCTAACATTATTTTAAAGAAGAACGGAAGCTAGAGTATTTGTAATTGGACACTGAATCCTAAGTTTTTATTTGAGTGCCTCTGAATGCTGACAGGATGACTTGACAGGC EMBV3_22828 CTGCAACAAGTATCTTCTGTGAAGTTTAACTGTGTCTTACCAACCAGGGCAGACACCAGC Gene GeneID:783965|ROR1:XM_002686351:21_cdna Constitutive 0 NULL GeneID:783965 3 GENE ROR1 NULL receptor tyrosine kinase-like orphan receptor 1 EMBV3_26631 CTCTCAGACTTTCCCCTGCGTTCTCCCGTGCCCCTGTGCTAAACCTGCACTTGACTATTT Gene GeneID:100141258|LOC100141258:XM_002697941:621_cdna Constitutive 0 NULL GeneID:100141258 25 GENE LOC100141258 NULL similar to Interleukin-32 precursor (IL-32) (Natural killer cells protein 4) (Tumor necrosis factor alpha-inducing factor) EMBV3_02617 CATATTGGTACTTGAAGACTCCTTTCAGAAGAAACCCCAGCCTTTTCCTGAGTTCAGTCC Gene GeneID:519708|YTHDF3:XM_002692694:106_cdna UTR3_Alt 2 NULL GeneID:519708 14 GENE YTHDF3 NULL YTH domain family, member 3 EMBV3_04582 CTGAAACTGGAGTGCCCTGGAGCCCATGCTGCACAACAAGAGAAGCCACCGCAAAGAGAA Gene BVT0102_319304 + 1 EMBV3_25798 GK000003.2:59809112-59843561 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177949 1 XLOC_107722 NonCoding TCONS_00177949 XLOC_107722 NonCoding NonCoding - 3:59821652-59821976 - TSS132708 324 0.996913580246914 1 0 0 0 0 0 0 0 0 0 7.30568389402503e-05 0 7.06540575419035e-06 0.000143468673374161 0.00203683704716529 5.80740148812868e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 2.96456457461973e-05 8.98999929759449e-05 0 NM_001001159.1 TLR6 Bos taurus toll-like receptor 6 (TLR6), mRNA. 5e-37 158 71.11 0.929012345679012 0 noncoding 0 0 0 0 -0.652994987266011 0.0917255187875424 -0.0294842399836854 0.553627471115494 CAGTGGTAAAGAATCTGCCTGCCAGTGAAGGAGACACAGGTTCGATTTCTGGTCTGGGAAGATCCCACATGGCAGTAAAGCAACTAAGAAGCCCATGCACCACAGCTATGGAAGCCGGGAGCCACGACGACTGAGTTAATGTGCGGCACCTGCTGAAACTGGAGTGCCCTGGAGCCCATGCTGCACAACAAGAGAAGCCACCGCAAAGAGAAGCCCGTGGAGCACCACAACTAGACAGGAGCTCCCACACTTCGCAACTAGAAGAAAGTCCGTGCAGCACCGAAGACCCAGCGTAGCCAAAAATAAATAAATAAAATTATTTTT TCONS_00173558 . 5' 12353 TCONS_00173558 . 5' 12353 EMBV3_38782 GGACTGCGGCGAGCCGAAACTGAGCAAAAGTGAGCTAAAGAGACGCCTGAAAGCTGAGAA Variant GeneID:509624|KARS:NM_001034356:85_cdna 77^263 1 EMBV3_28508 GeneID:509624 18 GENE KARS MGC127504 lysyl-tRNA synthetase EMBV3_08823 TGTTAGGGTCTGGAGTGGGGGGTTGAGGGTCTCCTGTTGTATTTTTCCAGGTCAAGGGAT Gene GeneID:540436|C19H17ORF28:NM_001076924:17_cdna Constitutive 0 NULL GeneID:540436 19 GENE C19H17ORF28 MGC139628 chromosome 17 open reading frame 28 ortholog EMBV3_31003 GTGATGCTGGTGTAACAAACATTGATGGCAAGGACAATGACAATGCCTATGGAAGAGGCC Gene BVT0101_071175 + 1 EMBV3_29616 GK000007.2:10081565-10087797 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24349 GAGCAAGGCACTTTGTATTCAGATGGCAGTTCTCTCATGGGGATTGGGCTTTCTCAACTC Gene GeneID:789787|LOC789787:XM_002689895:57_cdna Constitutive 0 NULL GeneID:789787 8 GENE LOC789787 NULL similar to olfactory receptor Olr853 EMBV3_43282 TCCCCAAGCTGAGAAGGGGCTTCATCTACGTGAGTACAACGTGCACATGGGCAGTGTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35146 GTGGTTGTATCAATTTACATTCCCAACACTGCAAGAGGGTTCCCTTTTCTCCACACCCTC Gene BVV0102_265879 - 1 EMBV3_14383 GK000024.2:36376333-37250983 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140154 TCONS_00140156 TCONS_00140153 TCONS_00140157 TCONS_00140155 TCONS_00140152 1 XLOC_085073 Coding TCONS_00140152 XLOC_085073 Coding Coding METTL4 24:37248334-37264610 j TSS104679 3941 2 TCONS_00140152_2 74 0.674701852321746 5 0.75815668202765 1.37066190899166e-09 9.94389980514285e-05 1.43944777981113e-13 1.22505207029743e-89 3.29793761799148e-05 5.79117832076969e-06 1.37868072939514e-18 2.70147263255101e-05 1.01098756330684e-66 5.92613284057269e-08 0.000145318399035115 2.14989054627551e-05 4.02196875111787e-23 0 9.80719488674316e-06 0.000887648593697832 0.00309481183112425 0.000712365737616543 2.91306730662455e-05 8.98701509665084e-05 2.85009068754311e-05 0.000495174574746883 0.000616485996947731 0.00106942251093791 4.91927513445201e-202 2.40772019118683e-40 2.42310430790971e-122 0.000294081938952407 0.000200046278409617 0.000460502042816715 XM_005224176.1 METTL4 PREDICTED: Bos taurus methyltransferase like 4 (METTL4), transcript 0.0 2866 99.69 0.407003298655164 NM_022840.3 METTL4 Homo sapiens methyltransferase like 4 (METTL4), mRNA. 0.0 1101 79.06 0.328343060137021 0 coding 0 0 0 0 0.0131522323850549 0.934780972721322 0.0141989773192536 0.774241666894802 TGAGCTGCAGCTGTGCTTTGCTGGACTGGCCATGAAGAGATACCCTATGTCCAGGGTCAGAGAAACCCCAGTAAGATGATATAGTTATTTATCACCACTGCAGATAAAGCAGATCCCTGTCCCTAAGCTGGCTGCTCCAAGCTGTCTTGTTGTTACGTGGGTGACAAATAGACAGAAGCACCTGCGTTTTGTCAAGGAAGAGCTTTACCCGTCTTGGTCTGTGGAGGTAGTTGCTGAATGGCACTGGGTAAAAATCACCAGTTCAGGAGAGTTTGTGTTCCCATTAGATTCTCCACACAAAAAGCCTTATGAAGGTCTTATATTGGGAAGAGTTCGAGAAAAAGCTGCTTTACTATTAAGTAGGAATGCAGATGTAAAAGAGCTGCCCATTCCAGACCACAAGTTAATTGTCAGTGTGCCCTGTACGCTCCATTCACATAAGCCACCTCTTGCTGAGGTTCTAAAAGACTATATCAAGCCAGAGGGAGAATGTTTGGAATTGTTTGCTCGAAATTTACAGCCGGGTTGGACTAGTTGGGGCAATGAAGTTCTCAAATTTCAACACATGGATTATTTTGTTGCTCTGAAGTCTAAAAGCTGACTAGGCTCCTAAAATTGTGTTTTTCTTCAGTTTTTCCTCACTCCTTCTCCTTTCATTCTGATTTATATTTTCCTTTTTTTACCAACCAGTATGCTTAGAGATGTAAACAGAACTTTGCTTTTCAGCAAAGTGACTAGAAGTGACTGACCATCATATAATTTCAAGATGAATTTTACTTCAGGTGCACTAGTATTCCACATTATCCTGGACTCTCTACAAATGAAAGAAGTAAGCCGTTTGAAAGAAGGTAAGACTTTGTTATTGAAAAAGTTCAGAAAGCATGCGTTATGGACCTGAAGTCATAATTCTGCATATGGATGCGTTTTGTTTAGCCCACATGGTGGTGTAAAAAAAATTTTGAACCATCAGAGAATTTCAAGAAATCAGGAAATTTCACATACTAAGTCTTTAATTATCAGCAACTCTGGCTATACAATAGTCTGTACTTTTTCCTGACATCAGTCTGTGGGACCCAGTGATGCCAACTCATTTGGGAAGGGCCATGTACTCTCCAGCTTACTTCAGTAACCTTGCCCCATGCCAATCAGTTATATGTTCTACTTGACTCCTGTACAACCTGAATTTAGAACTTCTTGTTTAGTGTTACATTCTGGAAAACATTCAAAGACCTGTCAAGTACCACATCATTGTACTGAGTTTATGAGACTTTTTTTGGAGGGTTTTAAATTGCATTCACGGTCACTTTTCAAGTACTTTTTACTTTTGCTTGTTCCTCTAGAAGGAAAAAAAAAATTCTTATAATGTTATAAAGTAAACATTGCTTGAACTTAATTGATATTTATAGACTATTCCATCTGAAAGCAGCAGAATACACATTCTTCTCTAGTGCACTTGGAACACTCTATGGATGGATCACATGCTGGATCTCAAAACAAACCTCAGTAAATTTTAAAAAGTTGAAATCACATCAAACATATTTTCCAACCACAATACTATGAGATTAGAAATCAACTACAGGAAAAAGCTAGGAAAAACTCCAAAAACTGTGACATGCTGATGAAAGAGATGGAATATGACACAAACAGATGGAAAGACATACTTCTTGGATTGGAAGACTCAATATTGTCAAAATTACTATACTACCCAAGGCAATGTACAGATTCAGTGCAATCCCTAACAGATTATCAATAGAATTTTTCACAGAGCTGGAACAAAAATTTTAAAATTTGTATGGAAACGTGAAAAACTCAGGATATCCAAAGCAATTCTGACAAAGAAAAATGGAGTTGGAGAAATCAGGCTCCCTGACTTTAAACTATACTACAAAGCTACAGTAATCAAAGCAGTATTGTACTGGAACAGAAACAGAAATATAGATCAATGGAACAAGATGGAATGCCTAGATATAAACCCATGCACCTGTGGTTAGTTAATCTACAATAAAGGAGGCAAGAATATACAATGGAGAAAAGACAGTCTCTTCAGTAAGTGACACTGGGAACACAGCTATATATTAAAGAAGGAAGTTAGAATATTCTCTAACACTGTACACAAAAGTAAACTCAAAATGGATTAAAGGCCTAAATGTAAGACCAGATACTATAAACTCTTATAGGAAAACATAGGCATAATAGTCTTTGACATAAATTGCAGCAATATTTTTTTGGATCTACCTCATAGACAATGAAAATTTAAAAAAAAATACAGAAATGGGACCCAATTAAGCTTAAAAGCTTTTGCACAGTAAAGGCAACCATAAGCAAAGTGAAAAGACAACTCACAGAATGGAAGAATATTTTAATATTTGTAAATGAAGTGACCAACAAAGATTAATCTCCAAAATAATACAAATAGCTCTTGCAGCTCAATATCAAAAACCCAAAAATAACCCAGTCCAAAAAAAAAAGGGCAGATGTAAATAGGCATTTCTCCAAAAAATACATACAGATGGCCAAAAAACACATGTAAAGATGCTCGGCATTGCTAATTTTTAAAGAAGTGAGGTATCACCTCACTGGTCAGAATGACCATCATCAAAAGTCTACAAACAATAGAAGAGGGTGTGGAGAAAAGGGAACCCTCTTGCAGTGTTGGGAATGTAAATTGATACAACCACTATGGAGAATAGTATGGACATTGCTTAAAAACCAAAATCTACCATGTGATCCAGCAATCCCATTCCTGGGCTCATATCCAGAGAAAACCATAGTTCAAAAAGATACATGCATCCCTGTGTTCACTGTGGCATTATTCACAGCAGTCTAAACATGGAAGCAGCCTAAATGTCCATCGACAGAGGAATGGATAAAGAAGATGTGATATACGTACAGTAGACTGTTAGCCATAAAAAAGAAATAATACCATCTGGGGCAATGTGGATGGACCTAGAGATTATTTTACTAAGTGAAATAAGTCAGAGAAAGACAAATTGCATACAATACCACTTATATGAAGTCTAAAAAGTTGATACAAATGCATTTATTTACAAAACAGAAACAGACTTATAGTCTTTGAAAACAAATATATGGTTAGCAAAGGAGAAAGGCTGGGGGGGGGTAATAAATTAGGAGTTTGGGATTAACAGATACACAAAATAATCAACAAGGACCTACTGTATAGTACAGGGAACTATATTCAGTGTTCTAAAACAACCTATATGGGAAGGGAATCTGAAAAAGAATGGATGTATATATGTGTATAACTGAATCACTGCTGTACCCCTGAAACTAACAACATTGTAAATCAACTATACCCCAATATAAAATTTAAATTAGAAAATTAAAGTAAAAAAACAAAGTAACCGCTGCTTATGATTGTGAAAAAATTTTATATCTTATTTCCAGATTTTCTACAAATATTTTTTTTACAAGTAAAATATTTTTACTGGAATGATTCTTTGAAAAGCATGCTGACTTATGTGTAACCTTTACAATTTTTTTTGATGTATATTTTTTCACAGAGTAACATTCTCCAGTTTTCAGTGTAGAATTCAGTGAGTTTTGAAGATGTATATATAGATGTCTGTCTACAACCATAAACATTATATAGAACATTTCCTTCATCCCCTGAAATTCATGTGTCCATTTGCGGTCAGTCATATCCTCCCACCTTTGCCACTGGCAAATAATGATTTGTTTTGTATCATTAGTTTTGCATTTTTTAGAATTTCATACAGATGAAAACATAGACTATGTAATCTATTGTGTTTGGCCTTTTAGCATTTTGAGAAAAGTGTTTATACTATTTACAGATTTTCTATAAATGTTTATCTACTAAGTAAAACGTTAGATTGAAATGACTGACTGACTGTCAGGATTGCCAATTTGTTTGCTGATTTTGCCAAATAAAAATGCTGTTTTTGAAGTTTGTTCATTCTTTG EMBV3_18142 TCACCATTGACATCGGGGAAGCCCCCAAAGGACAAGACATGGAAACAGAAGCTCACCAGA Gene GeneID:100140040|TMED2:NM_001159818:2_cdna Constitutive 0 NULL GeneID:100140040 17 GENE TMED2 NULL transmembrane emp24 domain trafficking protein 2 EMBV3_37626 AGGCCCAGGATGGCAGTCCACTGACAAGCAGGCGGTCCTCGGAACCTCAAGCCCACGGCC Variant GeneID:515410|PDLIM4:NM_001034491:54_cdna 397^737 3 EMBV3_24522 GeneID:515410 7 GENE PDLIM4 MGC127818 PDZ and LIM domain 4 EMBV3_19855 GGGATTGTACTGTCCTGTGGGTTAAGTTACTACCTCGTGGGCTTCGCTAGGTGTGGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17530 TCCACTGTTAAGGAGACTGTGATGGCTATGATGTACACTGTGGTGACCCCCATGCTGAAC Gene GeneID:511509|LOC511509:XM_002695740:425_cdna Constitutive 0 NULL GeneID:511509 19 GENE LOC511509 NULL similar to olfactory receptor Olr1466 EMBV3_07065 GACTGGAAAACCCAAACTTTTCATTATTCAGGCCTGCCGAGGCACAGAACTGGACTGTGG Gene GeneID:408016|CASP3:NM_001077840:13_cdna UTR3_Alt 2 NULL GeneID:408016 27 GENE CASP3 NULL caspase 3, apoptosis-related cysteine peptidase EMBV3_34584 ACAGATGCCCACTTCACAGTCCCCAGCTGTAAAAGCTTCAATTCCTGCAACATCAGCAGT Gene GeneID:532936|AK6:NM_001075975:90_cdna Constitutive 2 NULL GeneID:532936 20 GENE AK6 MGC139662 MGC159662 TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa EMBV3_05499 CAAGGAGGAGTGTATTTGCAGTGGCCCTGAGTGTGTACTGTTACCGTGTCAACCGGCGCT Variant GeneID:614193|MIIP:XM_002694038:103_cdna 841^893 3 EMBV3_06843 GeneID:614193 16 GENE MIIP NULL migration and invasion inhibitory protein EMBV3_07631 CATACACCATAACCAAGTGGGCTTTATCCCAGGGATGCAAGGATTCTTCAATATCCGCAA Gene BVV0101_032106 - 1 EMBV3_41906 GK000013.2:48711088-49550049 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007479 TCONS_00240570 TCONS_00152751 TCONS_00116668 TCONS_00124122 TCONS_00238892 TCONS_00233446 TCONS_00174964 TCONS_00179481 TCONS_00071338 TCONS_00152649 TCONS_00224115 TCONS_00032585 TCONS_00177993 TCONS_00048823 TCONS_00021453 TCONS_00107167 TCONS_00135549 TCONS_00115689 TCONS_00207066 TCONS_00250727 TCONS_00116119 TCONS_00208545 TCONS_00110347 TCONS_00253076 TCONS_00021578 TCONS_00250238 TCONS_00251888 TCONS_00223458 TCONS_00175068 TCONS_00098382 TCONS_00242132 TCONS_00254568 TCONS_00007449 TCONS_00031044 TCONS_00007556 TCONS_00152716 TCONS_00162777 TCONS_00117117 TCONS_00218764 TCONS_00157711 TCONS_00141423 TCONS_00136862 TCONS_00031912 TCONS_00031937 TCONS_00179125 TCONS_00186815 TCONS_00251853 TCONS_00124128 TCONS_00238441 TCONS_00185929 TCONS_00135700 TCONS_00020398 TCONS_00020725 TCONS_00073275 TCONS_00240473 TCONS_00218860 TCONS_00250529 TCONS_00251931 TCONS_00040338 TCONS_00200213 TCONS_00039852 TCONS_00022063 TCONS_00021597 TCONS_00233374 TCONS_00206425 TCONS_00040696 TCONS_00156738 TCONS_00208725 TCONS_00207276 TCONS_00111564 TCONS_00142125 TCONS_00206407 TCONS_00115730 TCONS_00071042 TCONS_00130587 TCONS_00037883 77 XLOC_003040 XLOC_147234 XLOC_092516 XLOC_070834 XLOC_075674 XLOC_145558 XLOC_142928 XLOC_104747 XLOC_109253 XLOC_043109 XLOC_092414 XLOC_137411 XLOC_018825 XLOC_107766 XLOC_028954 XLOC_012126 XLOC_063078 XLOC_081772 XLOC_069858 XLOC_125585 XLOC_153670 XLOC_070288 XLOC_127058 XLOC_066251 XLOC_156017 XLOC_012251 XLOC_153181 XLOC_154829 XLOC_136758 XLOC_104851 XLOC_058628 XLOC_148796 XLOC_157500 XLOC_003010 XLOC_017293 XLOC_003117 XLOC_092481 XLOC_099658 XLOC_071283 XLOC_132083 XLOC_096166 XLOC_085851 XLOC_083073 XLOC_018157 XLOC_018182 XLOC_108898 XLOC_112866 XLOC_154794 XLOC_075680 XLOC_145108 XLOC_111982 XLOC_081923 XLOC_011075 XLOC_011400 XLOC_045040 XLOC_147137 XLOC_132179 XLOC_153472 XLOC_154872 XLOC_024154 XLOC_121865 XLOC_023669 XLOC_012734 XLOC_012270 XLOC_142856 XLOC_124947 XLOC_024512 XLOC_095198 XLOC_127237 XLOC_125794 XLOC_067464 XLOC_086550 XLOC_124929 XLOC_069899 XLOC_042815 XLOC_079295 XLOC_021712 Coding TCONS_00250529 XLOC_153472 NonCoding NonCoding - X:42049161-42049949 - TSS187750 788 2 TCONS_00250529_3 84 0.998730964467005 1 0 1.23329418163439e-06 2.12531113965679e-06 0 0 6.26545040596956e-07 0 0 0 6.67523325166044e-06 4.35119628198308e-06 2.42088161611916e-07 1.90482584342807e-06 0 0 6.22613039246579e-06 0.000101059326334391 0.00420368112349935 3.4494691549136e-05 0 2.01536441530632e-05 0 5.34043566966198e-06 8.47939890028698e-05 4.80296153052119e-05 0 0 1.85886414756489e-06 6.0946592308444e-06 3.69640008818258e-06 0 NM_001206364.1 SLAMF6 Bos taurus SLAM family member 6 (SLAMF6), mRNA. 6e-53 212 83.17 0.253807106598985 NR_047679.1 UGDH-AS1 Homo sapiens UGDH antisense RNA 1 (UGDH-AS1), non-coding RNA. 5e-111 405 76.51 0.700507614213198 0 noncoding ATTTCTGTGTGTTGATTTTATATCCTGCAACTTTACTATATTCATTGATTAGCTCTAGTAATTTTCTGGTGGAGTCTTTAGGGTTTTCTATGTAGAGGATCATGTCATCTGTAAACAGAGTTTTTTCTTTTCCAATTTAGATTCCTTTTATTTCTTTTTCTGCTCTGATTGCTGTGCCCAGAACTTCCAAAACTATGTTGAATAGTAGTGGTGAAAGAGGGCACCCTTGTCTTTTTCCTGACTTTAGAAGAAATGCTTTCAATTTTTCACCATTGAGGATAACGTTTGCTGTGGGTTTGTCATATATAGCTTTTATTATGTTGAGGTATGTTCCTTCTATTCCTGCTTTCTGGAGAGTTTTTATCATAAATGGATGTTGAATTTTGTCAAGGCTTTCTCTGCATCTATTGAGATAATCATATGGTTTTTATTTTTCAATTTGTTAATGTGGTGTATTACATTGACTGATTTGCAGATATTGAAGAATCCTTGCATCCCTGGGATAAAGCCCACTTGGTCATGGTGTATGATCTTTTTAATGTGCTGTTGGATTCTTTTTTTTTTTTTTTTGTATTCCTATTTTTTTTTTTTATTTTTTATTATTTTTTTTTTGGATTCTGATTGCTAGAATTTTGTTAAGGATTTTTGCATCTATGTTCATCAGTGATATTGGCCTGTAGTTTTCTTTTTTTGTAGCATCTTTGTCAGGTTTTGGTATTAGGGTGATTGTGGCCTCATAGAATGAGTTTGGAAGTTTACTTTCCTCTGCAATTTTCTGGAAGATTTTG TCONS_00244277 . 3' 38144 TCONS_00244277 . 3' 38931 EMBV3_30593 GGCTGCCATCCACAGAAATAGCTAGAGACCCCTACATGGTTTCTACGTGGTCGAGAGGTA Gene BVT0102_051746 + 1 EMBV3_38743 GK000024.2:46635196-46653512 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28366 CCGGCTGGGGCAACACCCTGAGCAGTGGCGGCAACGGACAGCTCCAGGGCATTGTGTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15146 CAGTTGCCAGAACACATCAAGAAGCCAGTCTGGGAAACAACACCAGAGGAAAAAGGAGAC Gene GeneID:515885|MRPS10:NM_001035314:285_cdna Constitutive 1 NULL GeneID:515885 23 GENE MRPS10 MGC128092 mitochondrial ribosomal protein S10 EMBV3_05628 GACATCGTCAAGATCCTTAACAAGAAGGGGCAGCAGGGCTGGTGGCGAGGGGAGATCTAT Gene GeneID:100336072|LOC100336072:XM_002688901:173_cdna Constitutive 0 NULL GeneID:100336072 7 GENE LOC100336072 NULL proto-oncogene vav-like EMBV3_36398 CAGCATCTTTGACTTTCCCCTCTTCCTGTGCTGCCACATCCAGCTCAATCACCAGGTCCT Gene BVT0102_147740 + 1 EMBV3_39202 GK000008.2:45178871-45219431 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01787 GAAGGTGCGCTGACCGGCCGTCCCGCTGTGGCCCAGCGGCGGTGAGCTGCCAGGCGCGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05254 TTCCCTCTACCCACCTGAGACTTTGTTTCTGTAATCCCCAATTTCACAACCTTTCCCACC Gene BVT0102_338806 + 1 EMBV3_21628 GK000024.2:49702610-49737879 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34441 GACGTTGGAACTAGAGCCCACAAGAGCAGGCCAAGACCTGTGTACTAAATCGAAACAAGA Gene BVV0101_028668 - 0 NULL GK000001.2:37123464-37803107 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06285 CCTCCGCATATTTGAGTTTACACAAGATCCTGCCCAGTGCATCAGCCTCCCTGTACGCAT Gene GeneID:511425|ACAD10:XM_002694501:385_cdna Constitutive 0 NULL GeneID:511425 17 GENE ACAD10 NULL acyl-Coenzyme A dehydrogenase family, member 10 EMBV3_38261 AAGGCTTACCCGGACGAGAGCGGGTCGCAAAGATTCTGCTTGCCATCTTCACTGTGCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14643 ACATGTTCGACAACGGCAGCTTCCTGCGGCGCCGCAAGCGCTTCAAACGCGCTGAGCTGC Gene GeneID:787258|FOXE3:XM_002686499:617_cdna Constitutive 0 NULL GeneID:787258 3 GENE FOXE3 NULL forkhead box E3 EMBV3_31839 ATGGAAGAGGTCTGCAGCTACGAGGAGGTCAAGGAGGTTTTCGAGGACAAGGAGAAAACG Gene GeneID:539569|PRRG3:XM_002699670:39_cdna Constitutive 0 NULL GeneID:539569 X GENE PRRG3 NULL proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane) EMBV3_23528 CTAAACCGACCCATACTGTATGGTGAACAGCAATAAAATAACTCAGGATGGAATGAAGTG Variant GeneID:512714|LRRC34:XM_002684932:90_cdna 723^877 4 EMBV3_21430 GeneID:512714 1 GENE LRRC34 NULL leucine rich repeat containing 34 EMBV3_21852 AAAGCTACACTTCATTTAAAAAAGAAACTAAAATGGTTAATCTAATGTTGCCTTGCTTTG Gene GeneID:534315|HNRPLL:NM_001076900:143_cdna Constitutive 2 NULL GeneID:534315 11 GENE HNRPLL MGC139688 heterogeneous nuclear ribonucleoprotein L-like EMBV3_14731 TATCAGGAAAGTTCAGTACATGTGTTTGGACTAGGGGTTGGGACACGAAGAGCAGCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11365 AAGTCTAAACATTCAAAGCAAGATGAATTGGCCAAAACAACCTTCAAAATATTTCAGATG Variant GeneID:513132|CTAGE5:NM_001075599:20_cdna 568^639 1 EMBV3_09451 GeneID:513132 21 GENE CTAGE5 MGC139789 CTAGE family, member 5 EMBV3_24362 AAGAGGAAGGTCACGGAGCCGAGAGAGAAGAGCGACGCCAGGAAGATCAAGAAGTAAAGA Gene GeneID:783720|PPIG:NM_001109807:55_cdna Constitutive 0 NULL GeneID:783720 2 GENE PPIG MGC166393 peptidylprolyl isomerase G (cyclophilin G) EMBV3_09319 ATTAATTAAATAACCTTCGGAGAGGGCAATGGCACCCCACTCCAGTAATCTTGCCTGGAG Gene BVT0102_247162 + 0 NULL GK000018.2:60430035-60442436 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087383 TCONS_00087384 TCONS_00087385 1 XLOC_052457 Coding TCONS_00087383 XLOC_052457 Coding Coding - 18:60440751-60456403 - TSS64886 3940 1 TCONS_00087383_4 283 0.122842639593909 3 0.748450578237812 0.0025285015001336 0.00197446113263166 0.00163084891280036 0.00129329801977365 0.00123734446294179 0.000266066220884107 0.00104093465148362 0.00133811277817266 0.00303403612946839 9.16454514553374e-05 3.00741904394518e-05 0.000105278373949648 0.00010861297232619 0.000427230733987631 0.000311853732090157 0.000240920730775045 1.30800094242405e-88 0 0.00493207872784259 0.00518604592544298 0.00190636175727293 2.54886666240817e-05 4.95559313634399e-06 9.49924270001188e-67 0.00353872155297391 0.00325834915671226 0.00209855383250244 1.49846277926381e-05 2.05618919840433e-05 7.40858294241269e-06 XM_001787818.3 LOC788860 PREDICTED: Bos taurus zinc finger protein 479-like (LOC788860), 0.0 1532 95.09 0.246954314720812 NM_001256171.1 ZNF85 Homo sapiens zinc finger protein 85 (ZNF85), transcript variant 3, 7e-137 493 72.62 0.23248730964467 TCONS_00087383_4 sp|A6QLU5|ZN184_BOVIN ZN184_BOVIN Zinc finger protein 184; 7e-39 146 39.13 0.724381625441696 2 noncoding 0 0 0 0 -1.06663057527827 0.0465682444758019 -0.739674011538659 0.000527853649082515 GTGGTTTGTAGGAAGTGCTTCAGAGGATCCTAAGGGAATGCCCAGGTTAAGGACGTGGCCTCTGGTCCGTTTGTGAGAGCTGAGGCCCAGCTTCAGTCCAAGCAGAGGCAGCAGGGTTGGTCTAGCTGGATTTGGACCGGGGAAGTCAGTCAGCTCACATCGTCTGTGAGCAGAGTGTTAGGAGCTCTCTAATGGGGAGAGAACAATCAAGAAATAAGCCCACAGGCTGGTCTCCAGGTAGGAAGTGACTGGTCCCGAATCTCTCCTGAGACAAAGGACAGGAGAGGTGGGTTTTTTCAGCTTTTCAAGGTCCTTCCGTCTGTAGGTGAAGTGGTTGCAGGTTAAAGAGCTGTGCGGATGCCTTTGGAGGTATTTTCTCAAGACACAGGTGTGAATTTGCAACATAACATTCCCAGAGAAGACTGAGAAGGAGGAAAAGAGGAGGAAATGGCAGCTTCTCAGGTCCCCTTTGGAGGAAAGGAAGAATCCCGGTGCTAGGTGTGAATGAATGAAGCAGATGACGCAGCGATATTGTCTCAGGACGTCCAGGGTTTGTTCCCAAAGAAGCCGTGCATAAGAGATTCATGTGTGATGTGCTGGGAAGTTCTGAGATCTCTCAGCTTGGAAATTTGTACTTAGTGAAAGACTGGGAAAGTTAAGGGGGCCTGTGATGTGCAAAAAGGATATTATTTTAGATATAACCGCATTGGGACAGCTATTCATGATGAAAATATAATTGCCAAAAGAAATTGAGGATGGGTGTCAAACTAGTAAAAGTTCTATTTGAAGTCAGTAAGTCTGGCAGAAAAATATGTTTTTTTTAAGCAAGGACCCACATGACTTAAAAAAAACACATATTCTCTGATGTGAAATTTGAAAAACATGGAAAGTCATCTAGTTTATGCTACAAATAATCACTCAAGCCAGTACGAACGTAGGTTTGAGTTAAACAGTCAGTCATACATGTCTGAAAGTCAGGGATTTGAAAGTGAAGGAAGAAAATCTCACTATGGTCAATTTGAGAGATTCTTTCACGAGGGCTCATTACTTTTCCACCAACAAACATTTTGTCCCTATTCCAATATCTGTTATGTTGGTAATAATGAGACAGTCTTTATCCAGCCACCATCATTCAATGGGTATCTTAGTACAGATAATGCGAAACAACCTTCCATGTGTAATCCAGCAAGTGAGGCCTTAAGCGAGAGCTCCAGCTTCAGTTATTACAACAGTATTTATGATGGAGCCAGAATCTACCCATGCCTTGAACCTGGGAATCTCTTTGACCAAGATGGTCTCATGAATCATCAGAGAACTCAATGTTCAGAGAACCATGATGAAAGGGATGAACATAGAAGTGTCTTTTATCAAAGCTCAAATCTTATTACAGATAGGAATGTCCATATTGAAGAAAATAACTACAGATTTAGTGAATGTGGTCAAGTTTCTAACCAGTCATCACAACTTATTCAATATCCGAGTATTCACACTAAGGAGGAACACTGCAAGTGGAATAAATGTGGGAAAGTCTTTCCTCAATTATCAAATCTAAACAGACACAGGAAAACCCACACTGGAGGGACACCTAACCAATGCACAGAATGTGGCAAAACCTTTAGCAAGCCCTTCAACCTTACTCGACATCTCACAGTTCATACTGCAGAGAAGACTTGCAAATGTACAGAATGTGGCAAAGCCTTTACTCGCAGTTCAAACCTTAATCGACATAGGTGAATCCATACTAGGGAAAAACCATATAAATGTCAGAATTGTGGGAAAGCCTTTAACCAAAGTACGACACTTTTCAACATCAGCGAATCCATACTGGGGAGAAACCATACAAGTGTAAAGAGTGTGGCAAAACTTTTATCAGTTGCTCAAAACTTACTCAGGATCAGAGAAGTCATAATGGGGAGAAACTATACAACTGTACAGAATGTGGCAAAACCTTTACCAGGTGTTCGTATGTAACTCAACATCAGTGAATTCATACAGGAGAGAAGCCTCATAAATGTACAGAATGTGGCAAAGCCTTTACCAGGCGTTCACATGTTACTCAACATCAGCGAATTCATACAGGAGAGAAGCCTTATAAATGTACAGAACATGGCAAAGCCTTTAATCAGGCTTCAAACCTTAATTAACATAGGCAAATTCATACTGGGGAGAAACCATACACATATGAAGAATATGGCAAAGCTTTTAATTGCTACTCAAACCTTACTCGTCATAAAATAATTCATAGCACCAAATAGTCTTACAAATATAAATAATGTGACAAAGCCTTAAAGTTAGCCATCACTTCACTCTGCATCAGAGGGCGTGTGCTGGAGAGAGATCCTACAAATGTAATAAGTGATGAAAGAGGTTTGTCCTAAGTATACAATTCAGGAAACACCAGAGAGTTCATACTGGGAAGAACATTTAATGCTGTAAGAAATGATGAAACGAATTTAAAAACTCAGATCTAAATAAATACGGAGAATTGATAATGGATAGCATTCAGTCATTAAGCCTTTTCTGATATTTAAATCAGGATATTATAGAAAATAATCCAAAGTTAAAACACTTAGAAAAATTATTTCTTACTGTGGATCATAGGATCAAGGTGAGAAATGTTTGACAGTACAATTATCATTGTATCCTTATTTATATTGACATTATGTGAAAGTGAAATTTAATATAATTTGAGTCTCAAAATACTACATGCTAAACCTTTGTTTCTAGTGTGTATGTGAGCTAATTTTCTTTTTTTAACTAATATTCTTGATCTTTGCTGCCTCAAAGTTAAGTGAAGCCCTTCTATGTTAGGTAGAAATAGTTTTTATCTACCTTTCTATGGAATATTAAGGACCTTGAAATGTGAAATGTACAATGAAAGTCTAAATGGAGGTGATGATTGTCATTGTTTAAAATATCCCTTTATGTCACCATTAGGTAAGTGTTCAGAAAATAATTCTTTGTATTAAAGTAAAACAGAGGGTCATTCTAAATTTTAAATAGTGGTGCCAATGGTTCTTTATGGATATAAAGATGGGAGTTCACTGAAATCCCCATGTATTTTTATAACAGCAATAACTAGAAGTCATAAATTTTAATTGACATGGTAGTAATCAGGAAATCTTATACCTAAGAAAAGTGATGTAACATTTTCCTGCTGCTGCTACTGCTAAGTCACCCCAGTCGTGTCGGACTCTGTGTGACCCCATAGACGGCAGCCCACCAGACTGCCCCGTCCCTGAGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCCTAGCGGCCCCATGGACTGCAGCCTACCAGGCTCCCCCGTCCATGCGATTCTCCAGGCAAGATTACTGGAGTGGGGTGCCATTGCCCTCTCCGAAGGTTATTTAATTAATCTACATCTTTGTTTACTAAGTAAATTGCTCTCTGTAAACCATAAATATCTTATTTCTCTGATCAGTATATCAGAAGAACAAGAATGTTTCCGAATGCTTGTAATCTGTGTTTTGATCAAAGATTATAAACTTTGGAAAGTTTTATTTAGCTTATGTGTGAACTTCCTATATGTTAGTTAATAAAATGAAATGGCTTTTACTATATTAAACTTCATGTATAATTGATGAAGTGTTCTCATCAGTAATAGGCTTCTCAGGTGGTTCAATGGTAAAGAATCTGCCTGCCGATGCAGGGGTCACAGAAGGTGTGGGTTCCATCCCTGGGTCAGAAAGATCCCCTGGAGAAGGAAATGGCAACCAGCTGCAGTATTTTTGCCTGGAGAACCCCATGGACAGAGGAGCCTGATAGGCTACAGTCCATGGTTGCAGAGTCAGACACAACTAAGCACATACACATGTATTCTACCACCAACATAAAGACGAATACCAAC TCONS_00087384 TCONS_00087384 s 5' 0 TCONS_00087384 TCONS_00087384 s 5' 0 EMBV3_23741 CTTGCCTAATGGTGGAGAAAGTGTTCTTGCAAAGAAGATGAGAGTGTTTTCCTAATACCC Gene BVV0102_014051 + 0 NULL GK000003.2:28125505-28364795 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11271 CCAGCTCAGTATGTCATCATTATCCACACCGCGGGGCGAACCTGCAACAAGTCTGATGAA Gene GeneID:616843|PGLYRP4:XM_002686023:447_cdna Constitutive 0 NULL GeneID:616843 3 GENE PGLYRP4 NULL peptidoglycan recognition protein 4 EMBV3_35103 TGGAGGTCCCCTCTCAGTTGCACTACAAACACTGACCAAATATGCAAGCGAGGCGTTCTG Gene GeneID:538654|TMEM110:NM_001076117:256_cdna Constitutive 0 NULL GeneID:538654 22 GENE TMEM110 MGC142756 transmembrane protein 110 EMBV3_33759 AGTTGTCTGGGGCAGGGAGGTGGAGAATTTTGAAGGTGGGTCGACTTGGATGTGGACTTT Gene BVT0101_025937 + 0 NULL GK000026.2:18432820-18442728 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151644 TCONS_00150289 2 XLOC_092154 XLOC_091844 Coding TCONS_00150289 XLOC_091844 NonCoding NonCoding FRAT2 26:18440129-18442826 x TSS112613 2697 3 TCONS_00150289_2 102 0.0552465702632555 1 0 0.00109743413656764 0.000756640541134431 0.000983616817266722 0.00109510375355948 0.000519213704807675 0.000208594511701124 0.000514648336467921 0.000910428508060403 0.000847243811404791 0.00418570808851496 0.001487904666937 0.000832972487228405 0.00269785902667817 0.0043543636324946 0.00237154603425353 0.00119304327858444 2.2709445727752e-17 0.00270724837489844 0.00104549923439563 0.00138130506820162 0.000745813585173059 9.25234890978459e-08 0.000364096521356521 0.00119710218542492 0.000403152004208526 0.0019444699070073 0.000764788379061919 0.00106688750477814 0.000428034555920718 0.00145160956542089 XM_005197087.1 FRAT2 PREDICTED: Bos taurus frequently rearranged in advanced T-cell lymphomas 2 (FRAT2), mRNA. 0.0 2572 100.00 0.528364849833148 NM_012083.2 FRAT2 Homo sapiens frequently rearranged in advanced T-cell lymphomas 2 (FRAT2), mRNA. 0.0 1034 76.16 0.521690767519466 0 noncoding 1 1 1 1 0.0322411050291749 0.772284569376923 -0.0538966027744077 0.578283522327127 GCACACCGCATGACTGGACGCCCTGATTAAGGACAGCAGGAGAACCTAGAGCCAGAGTGCCTAGGTTCAAACCCCAGCTCCTTATTAAAAGGTGGTGATTTCAGCAAATCACTTAATCTCCTGGACCTCAGTGTCTTCATTTATAAAAGGGAGAAAATAGTGCCTACATCATAACGAATAATAAAGCCGTGACGTAACGAACAGTACTTGGCACATGTGTCAAGTCCCAACCCCCGTAATGATAATAGCAGAGACAGATCATTTGGAAGGTGTGTGAAGGTGGCCTTCTAGAAGGCGTTCAGGAAAAGGGACTTATAAAATACGGAAGCAAAAGAGGTTGCAATGATCACAGTGGAGATCAAGGGGTGTCTTAAATGTTAGGACATGTGGAGGACATTGAAGAGACAAACAGGGGTCTGCTGAAAGAAGGCGGCGCAGTGGTGATAAGAATCAACAGTTATCATTTTTTCAGCCCTTAAGTGTTCCAGACATCTCAGGTCCTCATTACACTTAGCAGTACTGTTTTATAAATGAGAGAAGAAAAATGCAGAGCTGTCACTTACCTGGTATGACACACATGGCGAGCAGCAGGGCTGAGTCAAACTGAGTCACTGAGCACTAGCCTTCCCCTGCAGCCCATGTGGGAAATGCTGGGCAGGACAGGTGCCCCTGGGGCGAGTTAGCAGAGCTGGGCTGTACCAAGTAAGGCTTTCTTGGGGGAAGGGGGCCCATGCCAGGGGAAGATGGGATGGAGAGCAGGGGATCCAGGAGGGCCACTTTCATGAATTGAACTCTGCCTGCTCAAACCACACCAACTACCAAGGACATTGCTATAAAACCCTATTGTCAGAATTCTCTAGGCCACAGCTCAAGACTGGGTCAAATCTCAAAGATGAAAATAGTGAGGCTCTGTCTATACCCTCCCCATTCTTCAAACACAAAAAATTCAGAAAACTCACCTTCCTCCACCCTCTTTCAGGTACAGCAAATCACTTGGCCTCTGTCCTCCTTCCAGCCTAGAAAGTTTCTGGACTATGTTTTGATTCCACAAAAGGAGTTGAAAGCCCACCTAGCATGTTTTCTAAAACCTGGACTGAATTTTTGTGTCTTGTGGATTATCGACCCAGAAGCACTCTTGGACTGCAGCTCCACCAGTCTCCACCTCCCACCTCGACCCCCCCAAGGGCCCTCTCCATTATAACTTCATTAGGAAAGGTGTCACCTATGTGCTTTTCTTTCCCCCCGCCTTCCACCAAAAAGCCAAACCATGCTCCAAAACAAAAACCCAATTTATTCAGCAGACATTTTAATTAAGAAATCCTAGAAATCAGGACCACCACAATTTCAGACACTCCGGTGCGAAGTGTACGTCAACAGCTACATCTGAAGGATGAGCAAGCCATTGAATCTTTTTTTAAAAAGTTAGTTTAGCTCCCTTAAAGTTTGGAGGTGGCACCTTATTTAAAGCGCCCTCAAGTTTCCTAAGTTTCATATGGGTAAAGCCAGCAGTTTCTCCTCTTGGAGAGTCACATTTAAAACACGGTTTCTGTCACTCACAAAAAGCTGGTGCCTAGAGGAAACAGAGGCGAGGACCCTCAGAGACTCAGGCTCATGGCTCCACGGAGGGCCAAAATAGAGCAGACAAACAGCCAGGGTCTCATCCATGCAGTGCACATCAGAAAGGGTGGAAGAAGAAAGGCCAAGCAGGAGGACAGGAGAGACTCAAGGATTGTTTATGACTGTCTCTGAGAAAACTCAGGGCATGGCTAAGAGTGGCCTCGCAGGAGGAGTTCTGGATAGAAAGAAAGCACGGAAAAAAACAAGTAATTCTCCTTACATCTGTATGTCCGCTCCAAGAGGTAGCAAAGCATAAACAGGACTCTTCTTGGAACAAAAGAAAAGACAGACACAGGGGTGAGTTAGCTTTCCCAGGAACCCCACAGTCTTCCACCTACAGCACACCATGACCTTGAATCACAGGTGGCAAGGTCAAGGCATTTAAAAGTCCACATCCAAGTCGACCCACCTTCAAAATTCTCCACCTCCCTGCCCCAGACAACTGGAGTTCCCATCTCCCACGTCAGTCAGTCACCGGATGAGGATGGGAGAGTAAGGGGGCTGGCATCCCAACCCACCCACCCACCACCAAGCTTTTACATTCTTTTCTCTGGAATTTCTTTGCACAGCGATTGTAGCACCATTTTCACTAAGCTCCTCCACCGGAAAATAAAGAAATGTATTCGAGTCATCAGTTTTCAAGTATTGTTATAAAGCCCTCACGATTCTCGCCCCTTGAAACCGAATCTTTAAACAATCCTAGCACACGACATCCCCAAGGGTTAAGTCAGGTACAAGTTGATGCAAATAGCTGCCATAGTCTCCCAGTTTTGTCCCAGGTCCCTGGGGCCGGGGTTAATTCTCACGCGACACGAACGCGCCCAGGCCCGCGTATTTCTCCACGCTCAAGTTTTCTCCGACAGCCTCGCCGGGGCCACTAACTTCTCGGCTTGAGGTCTCTCCCCACGCGCCTCCTTGCAGTCTAGGCGATCGCTCCAAGAACGGCAACGGCGGCTTCAGCTCAAGGTTGGGGTAAGTAGGACGCCGTAGGGTCCGCGCAGCAGCTTCTTTTCCTTCCTCCAGGGGCCCTGGGTCAGTGCAAAGCGCCGGAGGGTTGAAGGGAGACAGGATCCGGTCGGC TCONS_00151645 r 5' 0 TCONS_00151645 r 5' 0 EMBV3_05667 TATGAGGAGATCTCCTTCTGCATGTTTTCCCTGCAGGAGGTCCTGGAGAACGTGAGGCTA Gene GeneID:528030|NEU4:XM_002686626:161_cdna Constitutive 0 NULL GeneID:528030 3 GENE NEU4 NULL sialidase 4 EMBV3_27802 CTTGAATCAGATCCCCCTTGGCCGAGATGTACACAGTCTGGTGATGAGAAATGATGGAGC Gene GeneID:615298|CLLD6:NM_001038206:205_cdna Constitutive 1 NULL GeneID:615298 12 GENE CLLD6 MGC134367 chronic lymphocytic leukemia deletion region gene 6 protein homolog EMBV3_15996 GCACACGTTCCCTTATGACAGAGGAACTGTTTCCACAATGTGTAACGTTGGCCTTGGAGG Gene GeneID:533438|TFB1M:NM_001076896:5_cdna UTR3_Alt 3 NULL GeneID:533438 9 GENE TFB1M NULL transcription factor B1, mitochondrial EMBV3_14287 TAGCCAGCTACCAACAGAGAGAGGAAAAGCGCAAGGTCAGTGCTGCATCAGAGAAAACCA Gene BVT0102_014720 + 0 NULL GK000014.2:69161773-69287299 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24233 CCATGTAGATAGAGACATTTTACCCTTTGAGAAGAAATTTTGGCACGTGATGGCCACGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23532 GACTAATCAGGGTCAGAGAAGTTAAGTAACCTGCCCAAGGTATCACAGCTAATAACTGGG Gene BVT0102_118147 + 0 NULL GK000028.2:23719898-24339097 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12712 TATATGGTCCTGGAACCAACAGAACTACTGGATCTCAGAGAAAACAAAATGCCAAGAGGT Variant GeneID:510511|NOL7:NM_001034384:68_cdna 651^728 1 EMBV3_25676 GeneID:510511 23 GENE NOL7 MGC128603 nucleolar protein 7, 27kDa EMBV3_08344 TCTGTGACCTTCCGCTGGTTATAAAGCTTGCCTGCACTGAGACCTATGTTCTGGAGTTGC Gene GeneID:788146|LOC788146:XM_002690695:318_cdna Constitutive 0 NULL GeneID:788146 10 GENE LOC788146 NULL similar to olfactory receptor Olr1625 EMBV3_39935 CAAGGCCATACCCCCACCTGTGACTGTGCAGGCGACACCACTCAACTGGAAAGAGCTGGA Gene GeneID:514398|SLA2:NM_001035294:1051_cdna UTR3_Alt 2 NULL GeneID:514398 13 GENE SLA2 NULL Src-like-adaptor 2 EMBV3_06518 GCTCTGCTTGGTCTGGTTGTGAGAGAAGCCTGGAGGAGAAGCACAGTTATCCCGTTGAAT Gene GeneID:535632|TGIF2:XM_002692455:490_cdna Constitutive 0 NULL GeneID:535632 13 GENE TGIF2 NULL TGFB-induced factor homeobox 2 EMBV3_39781 CTAATAACCAGCTGCAGTTCCTACCTCCAGCTGTGGTGCTCCCATTCAAGTTTCTGAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21419 CTTCTGTGACCTCTACCCTCTGATGAAGATCTCCTGCTCCAGCACCCACCTCAACACTTT Gene GeneID:538946|LOC538946:XM_002691567:57_cdna Constitutive 0 NULL GeneID:538946 11 GENE LOC538946 NULL similar to olfactory receptor, family 1, subfamily Q, member 1 EMBV3_15667 CTGACCACCTCACTTACTCCTAGCCGCAGCTTCCAAACCAGTGCCATTTCAAGGGACATT Gene GeneID:337887|ATP5G2:NM_176613:12_cdna Constitutive 0 NULL GeneID:337887 5 GENE ATP5G2 MGC137050 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) EMBV3_11711 CTGGCTTCCCAGGTGGGCCTACGTACTCAGGTGTGATTGACGACCGGGGCAAGTTCATCT Variant GeneID:511144|DDRGK1:NM_001075498:988_cdna 791^839 1 EMBV3_15233 GeneID:511144 13 GENE DDRGK1 C13H20ORF116 MGC139255 DDRGK domain containing 1 EMBV3_34115 TACCTGGCGAGCTGCCTGTATGTGAAAGCCATCGCCCGCGTCATCGAGTTCTACAAGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19131 TTCGAAGATAATAGGTCCACCTATTTAGTTAAGGCCACAGGACAGTAGAATTGATGCTCA Gene GeneID:768084|ZSCAN12:NM_001077138:40_cdna Constitutive 3 NULL GeneID:768084 23 GENE ZSCAN12 MGC139538 ZNF96 zinc finger and SCAN domain containing 12 EMBV3_25800 GGGCCTGGAAGTGACCACCTTTCCCTTGATGATGCCAGGCACCTTAGAGACAATGTTTTT Gene GeneID:511043|LAMC2:XM_002694208:52_cdna Constitutive 2 NULL GeneID:511043 16 GENE LAMC2 NULL laminin, gamma 2 EMBV3_19329 TCAAAGCCCGGCAGAAGATCGCCGTGAAGATGGTGCACGCTGACATCTCTATCAACATGA Gene GeneID:616179|EDA:NM_001081743:80_cdna Constitutive 0 NULL GeneID:616179 X GENE EDA ED1 ectodysplasin A EMBV3_19149 TCAGTGGCTCTGTCAACTCTCTCGTGCAGACCACCATCACCTTTCAGTTGCCTATGTGCA Gene GeneID:613799|LOC613799:XM_002687125:478_cdna Constitutive 0 NULL GeneID:613799 4 GENE LOC613799 NULL similar to CfOLF3 EMBV3_21805 GTTCGTTGTTTGGCACCACAAAAAGGGCAGTAAACAGATCCGAGCTATCCTAGGCCAGTT Variant GeneID:533987|METT5D1:NM_001079782:41_cdna 390^526 1 EMBV3_41190 GeneID:533987 15 GENE METT5D1 NULL methyltransferase 5 domain containing 1 EMBV3_15855 AAGGCCCCCATTCTGGGCAGCTTCCTTAGCGCCAGTGCCTTTGCTTCCTATGCCAGAGTG Gene GeneID:100336591|LOC100336591:XM_002697859:359_cdna Constitutive 0 NULL GeneID:100336591 25 GENE LOC100336591 NULL hypothetical protein LOC100336591 EMBV3_41292 GAGGCTGCATTAGTGGACTGTTCTGTGGCCCTGGCAAAGCCCTTCGACAAGTTCCAATTT Gene GeneID:514586|EPRS:NM_001034468:163_cdna Constitutive 2 NULL GeneID:514586 22 GENE EPRS EPRS MGC128695 glutamyl-prolyl-tRNA synthetase EMBV3_24711 GGCCAGTCATGAGCCTTTCTTTTAAAAGGCGGTTTTCTGTAATCACTAGAACGAGCAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08905 AGTGCGCCAAGGCCATCCTAAGGGTCTGGTGAGACAGCCAGCAACAAGAACAGTCATCTT Gene GeneID:540474|LMCD1:NM_001076222:196_cdna Constitutive 0 NULL GeneID:540474 22 GENE LMCD1 MGC140655 LIM and cysteine-rich domains 1 EMBV3_26737 CCCGGATCCAGCATTTTGTACGTAGGGGACGCATTGAACACCCACATTTATTCCATGAGG Gene GeneID:515824|PUS3:NM_001034512:17_cdna Constitutive 1 NULL GeneID:515824 29 GENE PUS3 MGC128956 pseudouridylate synthase 3 EMBV3_21581 CGACTTTGTGTTCCCCCTTTGATGGCTGTGGTTTTCTATTGTAGATACCGTGTGCCCTGC Gene GeneID:530813|DOK5:NM_001075939:1183_cdna Constitutive 0 NULL GeneID:530813 13 GENE DOK5 NULL docking protein 5 EMBV3_18681 TCCTGCCTCACCCTCCCTTCCAGTCCTATCCAACCCCCAAACAGATCACACGTATAAACT Gene GeneID:613683|FEZF2:NM_001038198:14_cdna Constitutive 0 NULL GeneID:613683 22 GENE FEZF2 ZNF312 FEZ family zinc finger 2 EMBV3_21860 TCCATTCATGAGAAAAGGGGTCGTCGGGGATTGGAAGAACCACTTCACCGTGGCCCAGAA Gene GeneID:783020|SULT1C2:NM_001080919:197_cdna Constitutive 0 NULL GeneID:783020 11 GENE SULT1C2 NULL sulfotransferase family, cytosolic, 1C, member 2 EMBV3_25390 GGTCAAGCCCTGACTGGACAATCACATCACAGATTCACTGCAGATTTCCCATGTCACTGT Gene GeneID:614521|RAB35:NM_001098127:261_cdna Constitutive 2 NULL GeneID:614521 17 GENE RAB35 MGC139264 RAB35, member RAS oncogene family EMBV3_18216 CCCTGGGTAAAATCAGTAGCTGTAAATGGGCCTTTAGGAAAGTGATGTGGAAGGTGGGGG Gene BVT0102_142199 - 0 NULL GK000016.2:11059033-11844320 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068669 TCONS_00068665 TCONS_00068668 TCONS_00066758 TCONS_00068671 TCONS_00068670 2 XLOC_041761 XLOC_041268 NonCoding TCONS_00068671 XLOC_041761 NonCoding NonCoding - 16:11583644-11663878 - TSS51376 1775 3 TCONS_00068671_2 40 0.808450704225352 2 0.977901860830332 0.00291206694963474 0.00310229178105225 0.00446504661490671 0.00153421482385532 0.00170784778425638 0.00102000403529167 0.00169969091155213 0.00373784177683064 0.000922719270922419 0.000157625685900568 8.91160215233386e-06 5.65520740221592e-12 5.33598682896131e-05 0.000147789741333584 0.000662676148151151 0 0 0 0.00690197538335578 0.00354296884484763 0.00113043863534406 0 0 0 0.00531475752354262 0.00298328153068229 0.00251664995044912 1.45907627040789e-10 1.01756022376835e-10 0 XM_612027.4 KIAA1407 PREDICTED: Bos taurus KIAA1407 ortholog (KIAA1407), transcript 2e-44 185 83.51 0.100845070422535 0 noncoding 1 1 1 1 -0.0177862470188107 0.870223745779135 -0.043233487789975 0.518057077572324 AGTACTTCTCTATCATTTAAGGAAATTTTAATATTATAAACAGTCATTGACTTCTCACTATGTAAACCAGTTTATAACAATGGACCCTGAGCCTCATTCCATGTTTTGGTTAGAGTGCTTTGGTTCAGGAACTGTCTTTTTGGTGTGTGTACAATAAGCTTTTACTTATTACTGCTTCAGCCATTCATTGATTTTATTTCAGACATGTATGCACTTTTGACATCCTCTAGCTTAGCGATTCTTACTTCAGCTGTGTCCAGTCTGCTAATGAACCCATAAGAGTCATTCTTCATTTCAGCTGTAGTGTCTTTTATCTCTTGATTTCCTTTTTTGGCCCTTAAGATTCCCAACTTTCAGCTTATAATGCCCTTCTGTTCTTGAATGTCATCTGTTTACTTGTTAGACCCCTTAGCAGAGTAAGCATAGTTGTTTCCAATTCTCAGTCTACTAATTCCAATATCCCTGCCTTGTCTAATTCTGGTATTTCTTCTGCCTCTTCAAGCTGCAATTGCTGTCTTTGATATGACTTGTAATTTTTCTCTTGATAGCAGACATGATGCCCTGGGTAAAATCAGTAGCTGTAAATGGGCCTTTAGGAAAGTGATGTGGAAGGTGGGGGAGGGGGAGTTTTCATAGTTCTGTAAGTAGGTCTCAGTCTTTATTTCCTTTTAAAATATTTATTTATTTGTCTGTGCAGGATTTTAGTTGTGGCCCCTGGAATCTTTAGTTGCAGCAAGCAGGATCCAGTTTCCTCACCAGGGATCTAACCCAGGTCCGCGCATTGGGAGCCTGGAATGTTAGCCACTGGACCAGTGGAGAAGTCACAGCCTCAGTCTTTTAATGAGCCTATACATCTGCACCGCAAATTGCTTACGTATTTCTCATTCTCTCTTTCTTTTGCGGGACGGGATAACTAGTATGGTCTGCAGATGGGCAAGTCAGGTTTAAAAGCCAGCAGTTAAGGCCATGCTTAAATAGTTTCTCACCTGCTGGCAGCCTTATTTAAGAATATTAAGTTCAGGTGTTTTTCATAATAGTGCCTTTTTCTCTTTCCTTGCCTGAGGCTCTGGAATCTTTTTCTCCAGTATTTACTGTGAAAACTTAGTCAAGTTTCTGAGGTGAAACTCAGTTGTGTGAAGGGCGCCTTGGAGTTTTTTAATTCTTGGACTTGTCTACTCTGAGCCCCCATCATTGAGTTACTTACAGCTGGGCTTTTTCACTCTGGGACAAGTTCTGGGGGAGTTTCAGCTCATGACTTTCTGCTCCGATATTAATACACGCCACTGATGCTGGGAAAGATTGAAGGCAAAAGGAGAAGAGGGCAACAGAGAATGAGATGGCATCACTGATGCAGTGGACATAACAGGGCAAACTCTGGGAGATGATGAGGGACAGGGAGGCCTGGTGTGCTGCAGTTCATGGTGTCTTGAAGAGTCGAACACAACTGGGCAACTGAACAACAACAGCAATACACTCCATGAATATTTTCTGTATGAATTACGAACACCAAATCTAACATACGTGCTTTCTTCTTATTATTATTATTTTTTTTGTATCTGTCTTGTTTTATCTATATGTTTTTCACTATCCACTGCTTGTGCTGCAGTTTTGAGATATAGTTTACTTCTGTAACAGGTCTAGATGATTTCTCTGTTACGTGATCGGTAAGGAGAATGATAATGGTCAGCCTTGGAAATCCATTCAATCCAAGAAGAAAATAGTCCTGGTTGTGACCATGTGATGTGATATGGATGGAATAAAAAAGTGAAAATTGC TCONS_00068678 TCONS_00068679 s 3' 1057042 TCONS_00068678 TCONS_00068679 s 3' 977316 EMBV3_43062 TGGCCATGTCTTTGTTCTTGGTTTTGACGCCCATCATCAAGGCTCCTCAGATGTACCATA Gene GeneID:506670|LOC506670:XM_002692832:189_cdna Constitutive 0 NULL GeneID:506670 14 GENE LOC506670 NULL similar to LOC518422 protein EMBV3_37355 GCAAAAAAGGAAATTGAGGCTCAGCGAGCTTGCCTGGGATCACACAGCTACAAAGTTTTG Gene BVV0102_041860 + 0 NULL GK000018.2:53900714-53905551 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04537 TCCAGCATTTTGGGTTGACCGTTGTATGCCGCAGCTCTGCTCTATTTATTATTATTTTGC Gene GeneID:538437|GEM:NM_001083732:67_cdna Constitutive 0 NULL GeneID:538437 14 GENE GEM MGC140409 GTP binding protein overexpressed in skeletal muscle EMBV3_01820 GTCTGGTCCTGGTTTCCTGGCTAGCTTTCATTCTAGGCACCTTCACAGCTCTTCTACATG Gene BVV0102_105598 + 0 NULL GK000014.2:15094667-15182380 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31116 TCATGAGGAACTCAGATTGGCTGTCTAGTGGCTGCTCCCTGTGTTGACGCAAGAGGCACA Gene BVV0102_080631 + 0 NULL GK000007.2:21345604-21381116 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212413 1 XLOC_130174 NonCoding TCONS_00212413 XLOC_130174 NonCoding NonCoding - 7:21365613-21366889 - TSS159400 1276 1 TCONS_00212413_3 99 0.115203761755486 1 0 0 0 0 0 0 0 0 4.39351252144396e-15 0 5.11215577507979e-49 5.2619994598867e-27 3.31456850465645e-12 3.61381558572921e-20 1.78275855000985e-21 2.44681705238483e-20 4.1811352025919e-05 0.000591703949775796 3.56679021638162e-22 0 0 0 6.73584256002251e-21 0.000226318136385198 2.60956760476106e-05 0 0 0 5.87781558640201e-22 1.64484126586545e-12 1.13111609243398e-15 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 5e-50 203 90.13 0.11833855799373 0 noncoding 0 0 0 0 -0.10534561077879 0.339817625455263 0.0215347166800057 0.648561381659503 GGTTCAATCCCTGGGTTGGGAACATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTAGGAAATCCCATGGACAGAGGAGCCTGGCAGGGTACAGTCCATGGGATTGCAGAAGAGTCAGACATGACTCAGAGACTAAACAAGATTTGAGAAATCCCTTGCTTTGGTTCTGCAGCACTTTGTAGTTTAGAAAATCAGTTCCATAGACTGAGATTATCTCCTTGATGGGGAGCAGAATGAACTATAACTTCTCAGACTCTTGGAATGAATGTTTTAAAAAGCCAGTGGTTCTTTTAAATTTTGAATGTCCTTGGTTGGATCCGGGGTTGATGGTCCAACATATGTTGTATTTGCTCATGAGGAACTCAGATTGGCTGTCTAGTGGCTGCTCCCTGTGTTGACGCAAGAGGCACATGTGCTAGACCAGCACCAACATGGCTGTGGAGGTTCTTCTGCCCCTTGAAACAGCAGGAGAGGGCTGGACCACGAATGAGCCCTCGCTGTGCGCAGAGCAGCCTGTTAAGGGTTTGGTTCATCGCAGTAAAGAGGCGCAGCCACACTGATCCTGGTTGACCTGCACTGCTTTGGTGGGGGGACGGTGTGTGTGTGTACATAACGCTTTCTGTTTAGCTTAACCAGCATGTATCAACAAGACGGCGTTCTTAAGCATCTGACCCACAGCGCTAACCATGCAGCCACCCTCCACGTGAGAACTACATTCCTTTTCAGAAGAACAGAAGAGGATTCTTGGAGTTTCACTGCCAAACAACGTGGCTCACCCTTCAGGCTTAGGAAGCTCCCGTCAGCGGTCTCAAACCCCTGCCTCGGGAATGTCCAGCCGTCATGTGACTCTGTGTGGAGGCTCAGGCTGGCCCTGACTGGGGAGCTGGGGTCTCCTGACTACATTCAAAGAAGGTTGCAGACGGGGGCAGAGGAATGAAATTCTCCATCCTCTTCCTAAGAGCCCAAGGATTTAGTGCATCAGATCTAAAGCTTTCCAGGGCATTTTCTGGACATCCCTGGATCTGAAATGGGCATTTCATATGGAGAATGCATATAGCTTTCATGGTAAAAAAAAAAAAAATCCGTTAGAAAAAAAATAAGAATTGTTACGGGTATAAATGTACAGTATGTCATATGTTTGACATAAAACCCTTGTCAACCAAAGCGCCAAACGAGGTCATCTCTCTGGGTGTGTATGTATGCGTGTACACACAAAGTAACAGATGTGATCTCAATGCCAATAAAACATCTGAACACCTCCTCC TCONS_00212414 TCONS_00212415 s 5' 14228 TCONS_00212414 TCONS_00212415 s 5' 15503 EMBV3_20443 TCTACGCTTGACCTACATGTTTTTTCAGACTTGACTCCAATCCATTCCTTACATGAAGGC Gene GeneID:539788|CBX3:NM_001101198:19_cdna Constitutive 0 NULL GeneID:539788 4 GENE CBX3 NULL chromobox homolog 3 (HP1 gamma homolog, Drosophila) EMBV3_02319 CCCCCATCCACCAGACCAACTCAGCATCTGGACCAGCTGGGGGCCTCCATGGGCGCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08045 TTTTTCCTGACCGGCGCACTCGAGGTGATCTGCGAAGCCTGGATGCGCGATTTGCTGTTC Gene GeneID:540357|CHST7:XM_002700057:20_cdna Constitutive 0 NULL GeneID:540357 X GENE CHST7 NULL carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 EMBV3_29278 CCACGTCCAGAAAATTAGAAAGTTGGACAGGCTTATTACTCAACAGGCAACACTCATCTG Gene BVT0102_272357 + 0 NULL GK000004.2:9778917-9791797 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06321 CAAGGATCTGTTTCCCAAAGACTCTCTCGACAGCTCTACTGTTCTGGTTCTGGTGAACGC Gene GeneID:100337223|LOC100337223:XM_002697853:2_cdna Constitutive 0 NULL GeneID:100337223 24 GENE LOC100337223 NULL serpin peptidase inhibitor, clade B like-like EMBV3_33805 GGCCATGGAGGAACGCAAGCCAGAGAGAAGTGATTGGAAGTGAACTCTTGCCCTGGAATA Gene GeneID:407210|Grb10:XM_002686637:40_cdna Constitutive 3 NULL GeneID:407210 4 GENE Grb10 NULL growth factor receptor-bound protein 10 EMBV3_25831 ATACTCACACTGCTGCATGTAGCTCTTGCATATTTACCGGTCTGAGGGAAACAGAATGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20939 CCAAAGGAACCACAAGCACGAAGAGCAGAGGGCACTCTGCCATCTGGAGCTGAAGCAGTT Variant GeneID:508142|TOMM34:XM_002692469:529_cdna 669^816 1 EMBV3_08712 GeneID:508142 13 GENE TOMM34 NULL translocase of outer mitochondrial membrane 34 EMBV3_34744 CTCAGAGCTTCTTGTTCGTGGTGGGCATCAGCCTTGTCCTTTTCTTGATGCAGTGTATGC Gene GeneID:513947|CALB2:NM_001035288:228_cdna Constitutive 0 NULL GeneID:513947 18 GENE CALB2 MGC128318 calbindin 2 EMBV3_38811 AGGGGGGCCTGACCTATAACACCACCTGCTGCTCCATGGCTGCCCCTCCTTCCATCTGCC Variant GeneID:505805|LY6G6C:NM_001077856:69_cdna 329^437 1 EMBV3_20636 GeneID:505805 23 GENE LY6G6C MGC155145 lymphocyte antigen 6 complex, locus G6C EMBV3_25047 TTGCTGGTAACTGAGGGAGTGACAGGAAGTCACTGGGACAGCAAGGCGTTTATCATCTGA Gene BVT0102_022381 + 0 NULL GK000010.2:86294122-86341460 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018277 TCONS_00018271 TCONS_00018274 TCONS_00018272 TCONS_00018276 TCONS_00018273 TCONS_00018283 TCONS_00018282 TCONS_00018275 TCONS_00018278 TCONS_00018284 TCONS_00018279 TCONS_00018281 TCONS_00018280 1 XLOC_009213 Coding TCONS_00018273 XLOC_009213 Coding Coding KIAA0317 10:86337522-86344925 j TSS12316 5073 3 TCONS_00018273_7 147 0.103489059727972 4 0.315185085112132 0.000392329639376873 0.00163578190706494 0.00097825779350514 2.76318673503233e-31 0.000354288845514366 2.46440013806811e-08 4.83980399422567e-53 0.000131961617683398 0.000224175450389527 1.26658711650841e-10 6.6800657914219e-114 5.48422942759218e-40 4.59560120263792e-28 0 0.000256441529413706 0.000721103898056829 6.12581414457463e-05 2.36254619633183e-93 0.000972246903384575 1.22634604100448e-14 3.58595769336971e-08 0.000473993903350877 3.1124464005619e-16 0.000623289330321771 0.00228197681953487 0.000324802474387936 0.00101989214739992 1.91055066354093e-22 1.3241526432203e-18 7.93902884019312e-28 XM_005212026.1 AREL1 PREDICTED: Bos taurus apoptosis resistant E3 ubiquitin protein ligase 1 (AREL1), transcript variant X1, mRNA. 0.0 5121 100.00 0.559432288586635 XM_005268243.1 AREL1 PREDICTED: Homo sapiens apoptosis resistant E3 ubiquitin protein ligase 1 (AREL1), transcript variant X1, mRNA. 0.0 1292 75.20 0.371377882909521 TCONS_00018273_1 sp|O15033|AREL1_HUMAN K0317_HUMAN Protein KIAA0317; 3e-82 261 95.31 0.976923076923077 1 noncoding 1 0 1 1 -0.0453412494146038 0.711852624159046 -0.0188135872183855 0.691687942492158 CGCCTTCTGCTACGAGATGCGGCAGGAAAGCCCTTTGGGACTGCTGATGTGTGGGACTGGGGACATCAGTGTGTCTGACTTCAAAGCCCACGCAGTGGTCATTGGTGGCTCGTGGCATTTCAGAGAAAAGGTCATGAGGTGGTTTTGGACCGTGGTTTCCAGTCTGACGCAGGAAGAGTTGGCTCGGCTACTGCAGTTCACCACAGGCTCCTCTCAGCTGCCACCCGGAGGCTTTGCTGCCCTCTGTCCCTCCTTCCAGATTATCGCAGCCCCGACCCACAGCACGCTCCCAACTGCACACACGTGTTTCAACCAGCTGTGCCTCCCTACGTATGACTCCTACGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGTGAGGGCTGCGAGGGCTTCGGCATGTTCTGACCACTCTCCCTGCCATCTGCTTGGCTCCCGTGGCTTCCCGGAGCCTCCAGGCGGCGCGCGCCACAGACGCGACCGCTGACCCTGACACAGAACCATCAGCCAGAAGCTGCGGCGTGCACCCCCGCAGTGTGTGGAGGAGTCGGTCACCCCCCAGCTTCGTCCTTCCCTCGCCCCCTCCCTTACCCCCAAGAGCCCCCTTTGGCAAGCCCCTACCCTGAGCAGCTCACTCAGTCGCAGAGGAGGGTGGGGCCCGCTGCGCTCGCCCTCGGTTCTCAGAGGAGCTCAGTGGTGGGAGCTGCCCCAGCCGCTGGGGGGAGGCGACACGGAGGCTCGGCCTTTCTGGGAGCACTGCGATCCTCGCCTCGCCCAGCCTCCTCTGCCAACGCTCCGCAGGGGTTCCCTCCGTGTCCCCTTGACCCGGGGTCTGTGAGTCCCTCTTGGGGACAGGTGACTGCGTCTGCTCGCCAGGAGAAGAACAGACGGGAGGTGGCCCACAGCGACAGACAGCCTTGAGTTTTGTCTGTCTGCACAACGGCCGGTGCAGGCACGGGACTAGCTCGCGTGGTTACTGATAGCACCGAAGGGTCCTTTTTTCTTTGGCGTCAGAACTGGAAAATGAGCTTTTCCATGCAAGCGTTTCTGGAAATGATCATATCGTTCATAAAGAAGAACTCCCTAGTAAGCTTTTTTCTTTTTGAGTATAATAAACCTGTGAGACAGACCTAAGAATGTGAAAGCTTAGCTGGGCTGCGGCTTCCAGTGCTGAAGGCGATGCTCCTTTAGGGTTGTGGGGCATTTCTTGGCATGTGACTGGCTTGAAGACTACTGATGCTTGTCCCTGAGTTTGTTCTTTACACTGAGATGTGGCTGGCCCTGGCTCCTTACCTCCAACTTGTGCTGTCTGCTAAGAGCTGGGCGTTCTTTAGGTTTCCACTGAAGAAAATTTTGGAGCAAGAAATTAGGACAGTTCAATAGCATGCCACTGGTCCCTGGTTCTCTCTGCTTGGTGTTCCCTGGCAGCACTAAGACAAGGGAGAAGGGATCAGTAATTTAATTGCTTCTCAGAGGTCCTTAGGGTCAGGACACAAGGGACACACATCGAGGAGCTGTGTCAGATGATAAACGCCTTGCTGTCCCAGTGACTTCCTGTCACTCCCTCAGTTACCAGCAAGGGCACCTCAGGAGGGAGGAAGACAACCAGGTTCACTGTGGCGTGACTGAAGAGAGCCTGCAGCTGTTTCTTGGAAGATGGCGACAACATTTTCCATTAACGATTTGAATGAAGACATTTTCAAGACTCAGAATCTCATCGATTTCCGAAGTTTCTGTTTCTAAGAAGGCTTTGCTGCAAGCGACCATTCCCAATGGGGCATTCGACTCTGAGAATATTAACAAGCCATCTTTATAGCCAAAACCAGCAAGTACAAAGAGTCCAGAGATGAGGCAGGACTTGAGGCCATGCCTTGGCCTGCCGGAAGCACGTCTGAGCCCTCCTGTTCCCAGGGATCGTGAGGAACACGCCTTCCTGAGCTGCTACAATTCCTGCCTGACCTCACTCCTTCGCAGTTGTCATCTGTCCTTGGCATGGGTGCTGACCTCACTCACCCTTGGGGTCCAGGGTCCAGCATTGGGGCCCTCTGTGCCCCAGGGTCCTCCACGCCACACGGTCACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCCCTGTGGGATACGTACAGGCAAGTGTCATCATCCCCCTGGGAAGCACAATGCCGCCCTTTGGGCCCAGAGAGGGATTCCAGCTAGGGGCACGTGGGCTGGCTCTGCTGTCTTTGGCCGTTGTTCCTCTTCCAAATCCTGTGTCCCCCGTCCCCTCCCCCCTTGCCCCTCCAGAGACTGATGCTGGAGCGTGAGTTGATTTTCTTGGCTCGATCTGTCCTTTCTGAGCTCTAGTCATAGCACTTTGCAGAGCATCCTGGGCACCCTGGTGGTGCAGCTGCAGCCTGCGGCGGTCCTTAGCCCCAGGGTCTTTGTTTCACAAAACCCTCTGGTACTGTTGTGGTTTTGTATTCTTCCAGTGTTCTCTCTCTCTGTCTCTCCTAACTATTCAAAAGTATCTTTGCTCTTTTGCCCTTTCCTTTGACCTTCTGTTCTAATCCTGCTTTGGAATTAGCCGGTGTGGGGAGAGGTACACCATGTCGGAGAGAAGAAAGAGTGCCTGTTACTGGAAGTGTTTCCTATTCACGTTTATTTTGCTCAGTTCTTTTTATTTATGCCCTTGTGGCCCAGGTACTTGGGCAGCCAGCTAACCTCCTGGCTAGTGAAGGAGACCAGGCACAAAGTGAACACCAAGGAAAGTGTCGTGTGTTTCTAGAACTCCAGCAGAGACCAAGCCCTGCTGCAAATTTGTCAGGCCAGACCAAAGGGCCACACAGTTGCTCAGTAGTGTAAATATTTTGTACAGTGAATAAATGAATGTTTAAAAGGACTAAGAAGCAAGTGACTGCTTTATGTGGTGATTCAGGGCTTAAATTGGAGGTGGGGAAGGAAAAGAAAAAAATGTAGAAATGTTTTTGCATTTCCCCAGTAACCCTTCAGAAGCAGTCAACTTGAGGTAGAATGGACTCCCGGAGCCCTAGCCCGGTCCAGACCTGCTTACCTTCTCACCCTTCCCTGACTGCTGTCCGTGGTGCCTGGCAGGGCCTCGGTGCCTCCTTGCACAGAGAGCTAACAGCTGGGACAAGTGCTTGTACTCAGCTCCAGAAGGAGAGACCAGTTTGGCAAAAAACAGGATGTCTGTTCTCATCAGTCTTTTAAGTGTTAATTCCTTATTGTTTTACTACACAAGAAACTCAGTGTAGAAAATTTGGAAATTAAAAAAAAAAAGTACAAGAAAATAAGATAGTTGCCATCCAGAGGGAAGAACACTTTGGTGGGTGGTCTTATTTACATATGGCACATGTATTTCTCAATGTCCTCTCAACTCTTGACTCTCCCACAAGTGCTTTGAGTATGGGGAAAAAAACCCATAAAACCTGCTCCTCAAAAATTTTGGGGTAGCAGGTGGGATGAATTCTTTTTCCAACCATAGATAAGCTTGGCAGAGAAAACCAGACCTTTGATATAGGCCTTACAGGAGAAGTGTTAGGGACCCTGGCTTTCTTGCAGAAGTGAATTTGTTGTCTTTGACATTGGTTCCCATTCTGGAAAATCAAAACAAATTCCCCTTTGTAATTGTGTTTTGTTGTGCTTTTGTCGTGTTTTGCTTGTCTTTTTGGCCACTCCGCATACCTTGCAACTACTCAAGCAGGGATTGAACCCAAGACCCAGCAGTGAAAGCACCAAGGCTTAACCACTGGACTGCTAGGGAATTCCCCTGTAATTGTTTTTAAAAATACAGATTTTTTTTTTCTCTTCTGCTCCCACCTCCCAGACTCAGCGAATTGGAATCTTAACTTGAAAATTACTCCTTTAGAGTGCATTCAATTCACTCCCACCTCATCAAGCTCTCCTGAGTGGTATGAGATGTGTTAAACACACAAAACAAAATTCTCTCCCTCTAGCTTTACACTTTCAGGTTATTTAACAGTCTTAAATCTTTTACACTTGCTGCTCTTATGGTTTTGACTGGGTCACTATGAACATGCATCACTGAGTGATTTCATCCCTTCGTGAAGTTATTCATAAGACTCAAGAGGCTGGTAGAATTGTTCTTGAATTAACACAATAAAATGCTGCCTTCAGCTTCTCATGGTGTTACCTCTGAGCCACAGCAGCTCAAGCTCTGAGACCTCTGCCCAGCCACACTTCTCTTAAACAGTGGAGGTTCTCCAGCAGGTGGCTTGACCAGAGGGCTCCTTACCTCTGCTTTGATTTCACTTAGACCCTCAAGCATAACAGACCAGCTCCAGGTATCCTGTAATATACTTTCATTTAAATAATTCCTCTTTTATTTGGAGGTGAACATATATACCAAAAAGGCATGCAGCATATACACTTTAACAAATAATTATAAGGGAAGTGCATATGCAACCATCATCCAGGAAAGAAAGAAAGAAAGTGTATTACAGCACTGCAGAGCAATTACCTAACCCTTCTGGAGGTAACTGTTTTCCTGACTTTTAGGATACTTTTTTCACCAATTCCCTTTTCAATGAGCCTGTCCCAAAAATCACAGTGGAGAGGAGGGTGGGAAATGAGTCCATGTGGTCTCTTGATAAGATGCTAACTAAGGTCAGTTTCTCCACAGTTTGTTTCAAAAGTCATCTGAAACCGTCATTGCCCCATGAGAATCTAGTTCAGATTCCTAATGCTGAATCTGATGAATCAGTCGTATTCAAAGACTATCAGTTCAGTTCAGTCGCTCAGTTGTGTCCGACTCTTTGAGGACCCCATGGACTGCAGCATGCCAGGCTTCCCTGTCCATCACCAACTCTTAGAATTTACTCAACTTATGTCCATTGAGTCGATGATGCCATCCAACCATCTCATCCTCTGTCCCCTTCTCCTGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAATTCTTCACATCAGGTGGCCAAAGTATTGGAAAAGACATCTGGAAAAGACCCATTTTCATTCCATCTGGCCATCCAAATTTCCAGATACGATGCATCAATTCCTCAGCACTCAGCTTTCTTTATAGTCCA EMBV3_39203 ATTGTGTTGAATGTTGATTTTATTCCCTTTCTTTAGCTGCAGGTGGCTTCAGGTGCTTTG Gene BVT0102_346307 + 0 NULL GK000004.2:75159361-75439598 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19373 CCCCGTTGATCCTTGGTGCCTTGGGAATAGACTGGATTTTAAGGGCCTACATGTTTTGAG Gene GeneID:540195|RNF19A:XM_002692784:57_cdna UTR3_Alt 2 NULL GeneID:540195 14 GENE RNF19A NULL ring finger protein 19A EMBV3_38469 GTAAGATTCGTTGTTGTAAGTTTGTCTTGTAGGTCCGCGTAGGGCTCCCTTCCTAGTCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30399 TCTCCTGGGACCGTGAGAATTACATAAGCTGCCATGACCCCAACTACCATGAACCCTTGA Gene GeneID:617472|TMEM146:XM_002688888:136_cdna Constitutive 0 NULL GeneID:617472 7 GENE TMEM146 NULL transmembrane protein 146 EMBV3_12882 TACAGGACTTTGAGGCTGCCAGCGCTCTCTCTTACCTAGGAAATTCTAGATTTGCACAGT Gene GeneID:616052|C21H14ORF129:NM_001078056:300_cdna Constitutive 1 NULL GeneID:616052 21 GENE C21H14ORF129 NULL chromosome 14 open reading frame 129 ortholog EMBV3_41286 TGTAAGAGGAAGAGAGCGCCTTCTAGATCTGATCGCCACGTTTCTAGTGCTGCAGTTCCT Gene GeneID:615359|PARP4:XM_002691868:187_cdna Constitutive 0 NULL GeneID:615359 12 GENE PARP4 NULL poly (ADP-ribose) polymerase family, member 4 EMBV3_34360 TGACATTGTGATTCGCCACGTGGCCCCCCATCCCAGAGAACCCTCACCCGCAACTGGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25703 TGGCAACGTCACGGACGACATGGAGAGGCAGGTGCAGGCCAACGACATCCGCATCCGGGT Gene GeneID:100125300|CCDC157:NM_001103333:2_cdna Constitutive 0 NULL GeneID:100125300 17 GENE CCDC157 MGC152025 coiled-coil domain containing 157 EMBV3_11658 CTATGGGCTCAGGCTTTTGGCCCTCTCCCTCTACAGGTGGGCAAGCATGGCATTCATCTT Gene BVT0102_412455 + 1 EMBV3_35303 GK000007.2:44803594-44816939 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24137 TCTGTGACGCCACCTGGGTGTTTTTCTGACACTAACTTTACCTAGTGCAATTCCCTCAGG Gene BVV0102_387757 - 1 EMBV3_17773 GK000018.2:65280019-65288703 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091953 1 XLOC_056722 NonCoding TCONS_00091953 XLOC_056722 NonCoding NonCoding - 18:65282291-65282949 - TSS69299 658 1 TCONS_00091953_1 51 0.951367781155015 1 0 0 0 0 0 0 0 0 0 0 0 3.4790033962014e-06 0 0 0.000350297786462092 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000175170844599505 0.000154934110824418 0 XM_005220735.1 TNS4 PREDICTED: Bos taurus tensin 4 (TNS4), transcript variant X1, mRNA. 3e-37 159 74.63 0.399696048632219 0 noncoding GTCCATGGGGTCACAAAGAGTTGGACACGACTGAGCGACTTCACTTTCACTTTCACTTACGATATAGTAAACTGGTTAAGTAAGCGTTTCCCTGACTTCTGGGAACTGTTCTAGCAAATAATCAAATTCAAGAAGAGTGATCAGAGGAAACTGATTTGCAACCAAATAGGACAGAATTTGTGGGTAATGGGGGAATCACTGCAACTGGCCTCTGAAGTGCGAGCCAGTCTTGTGGGACTGAGATCTTGACCTGAGGGAATTGCACTAGGTAAAGTTAGTGTCAGAAAGACACCCAGGTGGCGTCACAGAGAACTGGTTGGTGTGAGAAAACAAATCACACTTGTGGTATCAGAAGTGTTGAGTGTGGTTACTCAAAAAAAACACCTGTGATTTCCCTGGTGGTTTAGTGGTTAAGAATCTGCCTTGCAATGCAAAGGACACTGGTTCAACTCCTGATCTGGGGAGATCCCACATGCCACAGGGCAATTAACTCGGTGCACCACAATTACGGAGCCAGCACTCTAGAGTCTGTGCTCTGCAACAAGAGAAGCCACCACAGTGAGAAGCCTGGACACCTCAGCTAGAAGGTAGACCCCATTCTCTGCAATGAGAGAAAGCCTGCAAGAAGCAACGAAGACCCAGCACAGCCAAAAATAAG TCONS_00084993 . 3' 1490 TCONS_00084993 . 3' 2147 EMBV3_10335 ACAAGCAATCAGTCTCCCACTTAGTTCTGCATGCCCAGCACCCAACAAATGGAGCACGCT Gene GeneID:524199|ZC3H12B:XM_002700152:36_cdna Constitutive 0 NULL GeneID:524199 X GENE ZC3H12B NULL zinc finger CCCH-type containing 12B EMBV3_01065 CATACATTATCTGAGAAAAGAAACTACCAGATGCTGGCATCACCATCTACATCAGGTCAG Variant GeneID:533945|CNOT2:NM_001103277:7_cdna 74^196 3 EMBV3_24390 GeneID:533945 5 GENE CNOT2 MGC140232 CCR4-NOT transcription complex, subunit 2 EMBV3_18918 CTCCTCTCTTATCCCATCCAGCCTCCTCAACAGCCTTCACTGGAGCACCCAGAATAGTGT Gene BVT0102_245299 + 0 NULL GK000016.2:57848389-57861842 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067744 1 XLOC_041537 NonCoding TCONS_00067744 XLOC_041537 NonCoding NonCoding - 16:57851383-57860784 - TSS50874 3570 3 TCONS_00067744_5 84 0.177871148459384 4 0.62063829787234 0.000170566186634683 1.08896929166685e-05 2.56811217416513e-05 0.000135271787544787 1.28235081797537e-76 1.93258882361505e-05 0.000227908619515732 3.93125441229681e-99 0.000112963818344323 9.26795550147503e-06 2.90573051885205e-06 3.25729256050845e-05 9.44517678644568e-86 4.3030643408921e-74 2.5166406228471e-06 0.00192353351120573 0 4.91978467139291e-05 2.11679392468499e-05 6.20319314116716e-05 0.000186892268872023 8.55699124398638e-05 1.5418569619563e-05 0.000262974606876544 4.49521742823057e-05 7.38931847569155e-66 5.01877418000704e-05 2.15242478291444e-05 3.66425729100851e-05 0.000215564783173124 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 4e-57 228 84.76 0.0582633053221289 NM_014656.2 KIAA0040 Homo sapiens KIAA0040 (KIAA0040), transcript variant 2, mRNA. 0.0 875 70.44 0.535574229691877 0 noncoding 0 0 0 0 -0.357497877382044 0.170501785558154 -0.0435827405520069 0.394477449273786 TGAAAAAGTTTGGGAGGGGCAGTGGAGAACACTGAGGGTGTTTAAACCTTGGACTGACACTTGTAGTGAAACTTACGTTTTGGAAGCATCAGTCTGGTGACAGCATAGAGAATGGAGGGAGGCATGGAAGGAAGTAGAGATTCACAGACAGTGAAGGGTTATTGCAATAGGCAATGGGTATGGGCTTCTTGCGGGGCTCAGTGGTAAAGAATCCGCCTGCAATGCAGGAGACAAAAGAGATGCAGTTTCGATCCCTGAGTTGAGAAGATCCCCTAGAAAAGGGCATGGCAGCCCACTCCAGTATTCTTGCCTGGAGAATCCCCATGTTCAGAGGAGCCTGGTGGGTTATAGTCCATGGAGTCGCAGAGAGTCGGACATGACTGCAGCGACTAAGCACGCAGGCACTGACTTCCTTGGCCTGAGGCAGAAATGGTGGGAAACAGCAGAGCACAGATCAGTAATATTAATAGAAGGAAGGGTTAACAGGATTTGAGGGGGCTGGGTGGTAAATGAGGGGACGGCTCCTTTCATGGCAGAGTTTAAAACTAGTTGTTCTTGACAGTAGCTTCCTCTGGGAAGAGGGTCCCCACGTTTCGGTTTGTCGCATGATGTCTAGAGTTCTGCTTTGGGGAATTCCCTGGCGGTCCAGTGGTTAGGGCTCTGCGCGTCATTGCTGAGGACCTGGGTTCAATCCTTCGTTGATTTCACAAGCCGTGTGACCAAAAAAAAAAAAAAAAAATCTGCTTTTTAATTTGGAATTCTTAGGGATTCAAGGATCATTAAAGCCAGAAAACGCTGAAGGAGCTAGGGAAAAAGAAAAAAAAAAATGACCCAAGGTATTATGATCAAAGGGATGCCCTGAAGGAAAAGACCAGGTGTGTTGTCTGAGGAGAGGGAGGCTGTGGTCGGGATGGAGTGTCCCGGGTGGGGCTACAGCATGGGAGTGGAAAAGCAAGTATAAATAATGAAATAATCTCGGCGAAACGTAGCCATTTACAGGAGAAAGTCTTCCGCTAAAAATATTTCCAAGTCATACCCTTAAGCCCTTCACCGGGGCAGCGGAGAGGATAGGGAGGTTTCTGTCAATAAAGAGTGCAGATCAATCAATACGTTTGGAGCCCGCGGCCCGGCTCAGGGGCGCGCTGTTCCCGGCCAGGCCAGCAGATGGCAGTGTGGTCCTACCGGGAACCTCTAGCCTCAAAACTCCTTTCCTCTCCTATAGCGAGGGAAGTTCTGCGGGTCCTCACGTTTCTTCCTTCATCTGGAGAGTCAGCCTGTGGGTACGACTCACCATCCAGCATGGCTTGGTGGTTGCACGGGCAGTGTTGCCGCGCAAAACAGTGAATTTTTAGCACATTTCATCTGAGGATCAGCGACATAGCTGGACTGATGTTCTAAGAGAAGCACCGCTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCTGACTCTGTGCGACCCCAGAGACGGCAGCCCACCAGCTAGAGAAGCACCGTTGTAAGATACTGACTGGCATTAATTCTACTCAGAGATTAAGTCTGGCATGTACATCACACAATTGTGGGAGCTGGAGTTAGCCTTGGAATCAGGACAACCCAGTCCTCACCTCCCACACTGACAGTGGTCCTCGCCAGGCTAAGCCTTCAGGCTTCAGGAAGAAAAATACTGACAGATGCTATACAACATGGACCATTTATATTCTTCTTGAAAAGGTGACTGCCCTTTCTCTATATCTTCCCCTCCTCCCACCGCCCCCCCAAAACCCCAAAGCGAATCCACTGAGCAATTGGGAGAAAGATCTCTTCTGATTGTTCAGAAGTCCTGGGCCTGGGGGCTCCTCCCCAAGCCTGGGCTGGTCTGGGAGGCCTCTTCCTTGCCATCCCTTTTGTCCTCTGTTAGCCTAACCCCACCCCCACAAGATGGGCCAGGCAGGCTCCAGTCCTAAAGGACTCCTGGCTGCCTGTGATAGTTCTGGGACAGAGGGTGGGAAGGAGAAATGAAGATGGAGAGGGATGGAGCCAGGGTGCTGCCTAGAGACAGAGAGAGGGGAATAGGAGAAGAAAACGGGAGAGGAGGATGACAATAAAGTGGGAAGAAAAGGCAGTGGAATCCAATAATTGCTTTTTGTTTCTTTGACACACACACTTATTCAGCAAAGCCTGAGGGCCTCTCACTCACTGGACACTATTCTGGGTGCTCCAGTGAAGGCTGTTGAGGAGGCTGGATGGGATAAGAGAGGAGCCTCTTTCAAGCATTTGGTTCTCCAAACCTGGGTTATGGAAGCAACCAAGAAGCGTGTTTCTGGGTGTTCACACCTGGAGGTGGAACAGATACATTCAGATAGGAGATGGTGGGGCACGGCACCTGGAGATAGAGGCCTTGTCCTGGGTGATGACAACGGACTGCTGTCTTAATTCAGACTAGCAGCTGGTTGCCATGGCAACTATGGTACTTTTGTGATTCCGTGATCCCAGAGATCAGCACTCCTAGATTGTGTCTGACACCAGTCTCAGCCGTCAGCCTCTACGTCTCCCCCAAGTCATCCATTTGAGGGGGGGCTGAGAGTTGGAGACAGAAGAAGCAACTCAGCCTGCTGGGCTGTGGGAGGTGTGGGGAGATGAGAAGTCATTCTGGGAGGTGAAGGGGATGGCCAGGTGCTCCAGGACAAGGGGACAGAGCATCAGAGGGTACTTCTTTCGCTGGTCAAAGAGGTTTATGCCAGAGAGGCCTGAGTGCCTGGGGTATTTAGGCCCACTTAGGGCAAGAAGGGGGAACAGGGCCGGTTTGAAAATAAAAGCAGGCCTGCAATATGCTTCACAGGGTGTTCCGTTAGAAGATCTCAGTGCAGCAGTCGCCAGCAGGCACCTCGCCTCCATAGGACTAGATCTGGACTTTACCTGAAAGGCGAGTGACTACCAGCTGCCTCAAGTGAGCAAACAGGACATTTTCCGTGAAACAATGTTAGAGAATTGAGCTTTTGCTTCTATAAATATCATAGCTTAGCTACATTATTAATGAAATTGCAATTTCACCACCATTTAGAACAGCTTCAGTCGGAAAATATTTCAAGAGAGCTACCCTGCAGATTGGCAAATGAGCACAACCTGCTCCCACGTGGGGAATTATCCATCTTTGTGCTGTGGTCACAAGACAATCAAAATACCACCCAGTTCACCCTGTGAGTGGACTAATTCAGCCTCCCAAACTGGGCCCAGAATGTGGGGAGACGCTCTGCTCAACTAACTGCAGACCCAGCTTACATGTCCTTATGGATCTCAGGGCACACTTGTCAACCCAAACCTTGGCCCTGCATGCACCCTCCTCCTTCAGAATTCAATACCCAACTTCAACCTGTTGCAGCAATTAATGGGCTCACTTGGAAGAGAAGGTCACTTGGGGACTTGGTGAGGTATTACAAGTTTACCCTTAATAACATCACATATCTGACAGCATCCACAGACAGTTGTGAGTACCGACTGTGTGCAAGGCACTAGCCTGAGCTTCAAGATAAATATTAATAAATCTCTATATAGCTTCATCCTACTTTCATTTAAACTCTGTAACTTCTGCACC TCONS_00069766 r 3' 1059 TCONS_00067740 TCONS_00067742 TCONS_00067743 s 3' 2684 EMBV3_29088 GTGGTGCACCTCCTCAACGACCAGCATCTGATCGTGACGTCGGCCTCCACGGACCTTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20958 GCCGCATGAGACGGGACATCGATTAAAGGCAGCGTGTTTGGTAAGAATCCTTCCTCTAGT Gene BVV0102_199837 - 0 NULL GK000029.2:42608368-42617153 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165294 TCONS_00165292 TCONS_00165291 TCONS_00165290 TCONS_00165293 TCONS_00165289 1 XLOC_100479 Coding TCONS_00165291 XLOC_100479 Coding Coding ATL3 29:42612608-42652279 j TSS123501 6290 1 TCONS_00165291_4 523 0.0933227344992051 13 0.841769599193345 1.69548060613795e-08 2.33521168836048e-07 4.66838957248705e-08 5.19625519554996e-07 0.000428877688857357 0.000264981156166759 9.90611411429996e-09 0.000263321737626473 0.00170617233310597 0.000171314908477964 6.33083594304463e-11 9.10108266754536e-09 1.40086821153373e-10 0.000253341749100947 1.970026573221e-09 0.00305276100846992 0.00102051596229017 0.00248633632738957 0.00185675971401426 0.000750540912987394 0.000446699439522747 0.000748381434093624 0.00114736665076257 0.00240944871781783 6.51818985931702e-06 1.97869444721458e-07 0.000665245907329308 2.38895078949805e-05 0.000143054875576004 0.000365373565669971 NM_001098978.2 ATL3 Bos taurus atlastin GTPase 3 (ATL3), mRNA. 0.0 3119 99.94 0.275198728139905 XM_005273890.1 ATL3 PREDICTED: Homo sapiens atlastin GTPase 3 (ATL3), transcript 0.0 2596 88.21 0.324642289348172 TCONS_00165291_4 sp|Q6DD88|ATLA3_HUMAN ATLA3_HUMAN Atlastin-3; 0.0 1008 94.84 0.998087954110899 2 coding 0 0 0 0 -1.71549072741722 0.0488600267154377 -0.00639395872486757 0.916523176656316 AAGTCAGATGGCAAGGTGATGCTATGGAGAGTGGAAAGCCTGGTCCAGTGCAGGTTGTTTTGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTGGCCAGCATCCTCTTACAGGACCACATCCGAGAGCTCGATGTGGTGGTGGTGTCGGTGGCTGGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTCATGCTACGCTACTTATATTTCCAGAAGGAAGGTGGCCATTCAAACTGGTTAGGTGACCCAGAAGAACCGTTGACAGGGTTTTCATGGCGAGGGGGCTCTGACCCAGAAACCACCGGAATTCAGATCTGGAGTGAGGTTTTCACTGTGGAGAAGCCAGGTGGAAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGGGCATTTGACAGCCAGTCCACAGTGAAAGACTGTGCAACCATCTTCGCTCTGAGCACCATGACTAGCTCTGTGCAGATTTATAATTTGTCCCAGAACATTCAAGAAGATGATCTTCAACAGCTGCAGCTCTTCACAGAATATGGTCGTCTGGCGATGGATGAAATTTTCCAAAAACCCTTCCAGACACTGATGTTCCTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGATTACAGGGAGGAATGTCATTTTTGGAAAAGCGTCTACAGGTAAAAGAACACCAGCATGAAGAAATTCAGAATGTCCGGAATCACATCCATTCATGTTTCTCCAGCGTCTCCTGTTTTCTGCTACCACATCCGGGACTCCAGGTGGCCACAAGCCCTGACTTTGATGGCAAATTGAAAGACATTGCCAGTGAATTCAAAGAGCAGTTACAGACACTGATACTGCATGTATTAAACCCAGCCAACTTAATGGAAAAGGAGATCAATGGCTCAAAAGTCACCTGTCGGGGACTGCTGGAGTATTTTAAGGCATATATTAAAATTTACCAAGGAGAAGATCTGCCTCACCCCAAATCCATGCTTCAGGCCACTGCTGAAGCCAACAATTTAGCAGCTGCAGCCTCTGCCAAGGATGTTTATTACAACAACATGGAAGAGGTTTGTGGGGGAGACAAACCTTATCTGTCTCCAGACATTCTAGAGGAGAAGCACTGCGAATTCAAACAGCTTGCTCTGGACCATTTTAAGAAGACGAAAAAGATGGGTGGGAAGGATTTTAGCCTTCGTTACCAGCAGGAGCTGGAGGAGGAGATCAAGGAACTCTACGAGAACTTCTGCAAGCACAACAGTAGCAAGAACGTCTTCAGCACCTTCCGAACCCCCGCAGTGCTCTTCACGGGCATCGTGGCTCTGTACATCGCCTCTGGCCTCACTGGCTTTATTGGTCTTGAGGTGGTGGCCCAGCTGTTCAACTGTATGGTTGGGCTGCTGTTAATAGCGCTTCTCACCTGGGGGTACATCAGGTACTCTGGTCAGTATCGTGAGCTGGGCGGTGCTATTGATTCTGGTGCAGCGTATGTATTAGAGCAGGCCACTTCTCACATCGGTAATTCCACTCAGGCTGCTGTAAGGGATGCAGTTGCTGGGAGACCGCCCTCGGATAAAAAAGCTCAGTAGCATCCTAATGAGAGGATCAGACAAGAACCCTTCTAGCTCCCTCTGATTTCTGGGCGTCTGCTACGGCCGCAGGCCCAGGTCTCCAGGAACGCAGACCCGGGACCATCTGGGAAGAGCCGAAACACGGCACTAATAAATGAACAGACCTTTCCTGTGGTTTCAAATTCTTAAACACACTTCCGTTTCCCTTGGAAGCGTTTCTTTTCCTTGCTGGTGTAGATCCAAGCTTGTGTCTGTTTTCTCATTACTCTCTGCTTTGTGCACTTTATGGGGGAGAAAGCTAAAAGAACAATGGAAATGCGGTTTTAAGTCCTTCATGTGCCGCTTAGTGCCTTTTAAGATTGAACCCATGCTTTCGAGGACTTGATCGGGAGGAAATTGAGGACATTCACATGAAAGATGCTGTTTTGGGATGAACTGTCAGTTTGTACCGTACTCTTTTGAGAAGGATTCCTTTTTTTAAAAGTTTACAAAACTTGGCAAAAGCTTCAGAACTAAAGACTGACTAAAAATGATGCTATTACGGTTTTTAAATCTTACGATATTAGAGAATTGTGTTTGCCACATAATATGGAAAAATTGTATTTAAATCAACCATACACTGAAATTTAAGGTCTGTTTCCTGGCAGGCTGGCAGTTTTGTTAGAACATATTCTGGTTTGTTTTTGTTTTGTTTTTTTTTGCCTTCATTCATTCCTATAGCTTCTTTCTAGAAAAGAGGCAGACATGCCTTGAAAAACCAGAGCTGCTCATAATAAAAGGAATGAGTGTAATACTTTAAGGAAAAAACTTGAGTTTAAATGAACCATGTGACCTCTGATAAGTCATCTGAACTTGTGCCTTGGTCAGACTCGCTGATTGTAGGTTTATAACACGTATGTGTATTGTACATAACTCACACAGTCGTCATTCATGAGAACAGAACTTTATCAAGGACTAGAGGAAGGATTTTTACCAAACACGCTGCCTTTAATCGATGTCCCGTCTCATGCGGCTTGGCAGCGCATCAGGTCTTCATCCACAGCGTTTATTTGCAGTCTCCTGTTCACGGTCTGATGTTTTTAATAATGAAGCTAGAACTGTCAGTTTTATTTAGTGAACCATCCTTTATTTAACTTTATACGTGACTAGTCTGGTAGCTCTAAAATATCTTTGGCTTAGTAAGGACCGAGTCCCACCCAAGTATGGATATATAATATCTAGAAAGTATCTAAATTCTTTATTTACCTTGATTGTGTGATAAAAATTTTTGTCTACCAGTTGCCTTTTCCTTTGTTTATCATGGTGAATTGTTGTGGATTCTAAAACTTCATACAACTTGCCTGCAAGTATTTATATAAGCATTCAGGTATATGAGCCTTAATTCTTAAGATAATTTCTTTTGTTGTGGGAGGGAGGTAGGGAGTTACAGGCAGATTCCAAGTGTAAGTTCTATATACGTGAAGTATGAATGGATGGTGGAAAAAAGTCTTTTCTAGTCTGTCATCTCTTTATCAAAGAGTATTTTTCTTGACTATTTTAACACTTTACCACTCAAGTATTTTTGTAAGTTTTGAATTAATTCTAAATGCTTAATGTATTTTTCACATTTACATACCATCTTGCCCTGAAGTTCTTGCTATTTTATTCAGTCATGGTTAAATTTTAGAAAAATTCCAACTTGTTCTAAAAACTGTTTACTTGCGTATCAGTAATACTTAGCTTTATTAAATTAAAACTTTAGTTTTGAAATGTTGGTGCATTTTCAGGTGGCCTATCATATTCCTGAAGATTGATACTTATTTGCTAAAGGCCTTACAGATGTTGACATACTTAGCTTTTAATGCACTGTATAAGCATGTTTATAGATTTCAGAAGAGTTGTCTAGAATTATCCTACTTTTAATGATGAGAAAAGGATGCTATGTTTAAAACTTGAATACTAAAATACTAGATTTTTAAAAAATAAAAAAACATGCAATCATGTATGATTTAATGAAACCTTAGAATTTAGTTACTGTTTAAATTCACCAAATTTCTGTTTTGATCATAAAGGAATAACGTGTAATTACCCTGGGGAAGCCTTTTTTTGTTTGTTTTTGGTCTTATTCTGCCTCTGGAGATTGTTTATAGTTTTCTCAGTGAGGATTTCTATGAGTTTCCTTTTTTTTTTTAAAGAGAATTGATGACTTTGTATCAACTTTTCCAGTAAAAGGTGCATTCTCATTGCTGGCTGTAAGTAGTCCTGGGGAGGTTTATGACCGGGTTGCAAAGAATGCCTTTTTCCTCTGACCTCCCCTCAGCTGTTGGTGTGTGGGTCAGGGACTTGACTTAGGACTGTAAGGTTTTCCTGGTGTTTGTTTCTCTGCCACTCTTGCCTTCCCATGCAAGCATTTTTAGTTGGCACATTCCTACTAACATATAAAAGGTTTTCAGTATTTTCTATGAAAAGAATTCATTTTCAGTTCAGTTCAGTTGCTCAGTTGTGTCTGACTCTTTGCAACCCCATGCATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTAACTCAAACTCAAGTTGATCGAGTCGGTGATGCCACCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAGCTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCACCTTTAGCATCATTCCTTCCAAAGAACACCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGCACTCAGCTTTCTTCACAGTCCAAATTTCACATCCATACATGACCACTTAGAAGAGGTTAAATTTTTTTTTTTTTTTAATACTTCCAGCTTCTAAGTAAAAATAACAGAATCAAAATTTCAATTCTTTCACTGAGAACTCTTTCTAGATTGATGTATAGACAGAAAGAGGGAAAACTCATGTAAGATGATGAAAACAGCCTCAGAGTCATACCTTATTTTAGCAGTATATCAAGAAAGCTGTCGTGTGGAGGTCTCTGTAGTTTCACGCTTGGTAGAGTTGCTTATGAGTATTGTTTTTGTTTTACCTGGTCTTTGCTTTTTTTCTCTTTTGTGAAGTAAAATGCTTTAGGTGAACAAACAGACAAACTGCCTCATCCTGGCAGTGCATTTAACAGATCATACCCAGCGTTCCACCTGGCTTATGAAAATGGTGTCTTGATAAGTATGTATGAGTTACAGAAAAATTACGTGGTTGATTTAAGTCCAGGCAAAAGTGATTAAAAAACAAATAGTTTTATTTTTCCCTGGTTTTTTAAACAAAATAATGTAACTTATATGGATATCTTAATAGAGCTATTTTTTTCCCCATGGAACTATTGAAATGTAATTTAGGATTATTTAGGATGGCTGCCATCTAAGGTAGCCAACACAGGTTGCATCATTTGGCTTAATGTTTAGATCCATCACAATTTTAATCAAGGAATAGGGGCATAGTGAAGAAAAGCTTCAGTTACTAACATACCAACTATTTGTGAAGGTGGTGTTTTAAAATGATATTCCGAAGCCCATTTGTGAAGAGACCATTTGCAGTTGAGTAGTTTTCCTTCTGTGAAGTCATATTGTTGCTGTGTTTTGAATGGTGGCTCTCTTCTATCTTGACCTGCATAAAACAGCCCTGGGAGGGATGTTTAAAAAAATTCAAATTGCTAGCTTTATACCGAGGGATTGTCTCAGTGGATCTGGGTCTGGGTTGTGGCCCTGGAATCACCACTTTTAAAAACAGCATCACAGGTGGTTCAGAGAGCACAGTGGGAGAGGCTGCTCTGAGGGATGGGAAAGTGCAATTCAGTGTTGCCTGGAGGCAAGTGGACACCTTTTGCCTGAGATTCAGAATGGGTGGTCTCCTGCCAGATACAATCACTGAGAGTTAGGAGTAACAAGGATGCATTTAGTCCAGAGGATTACCCAAGCTCTATGAAAATGTTTCTCTAAATTAGAAAGTCCTCGTGCCTTCTCTGAAAAATGAATGTACAGGTATCCTGTTTACCAACAGGTGTACTTAGGATTAAAAAACTAGTTTGAAAGTTGTTTTTCTTTGAAAAAGCAAAAATTTAGCACTGTGACTTGAACCTCTGAATCTTTTCATGCACAGAAAACCGTAAGCCATAAGTAAAAATGAACAAAAAGGACAGAGAGGATCATAATTTTGAAAATTAGTGACAGAGTACCCCTTACCAGGGGCCTTCAAGATTAAGGACAGAAAGATTTTAGAAGAAATGTTTCTTCTTGAGAAAGGAGTCTCACATGCCAGAACTCAAATTATAAATGTAGTGTTCTTATGACCAGGGGAAGATGCATCTGATTCCCAAAGTGCTCCAGTTTAGATACGTAAATGCTGTCATGGACTTAAGCCTTAAAGGAGTGAATACTAATTTTGAGCGTATACAAATTTTCTTCTCTGATTTCTCTTCTCTTTCAAAAAAATGATTTGTTAAAAGCACTTTCTTCCTTCTAGACTTTTTGAATGGCTTTAAAATTTAATATACTTTTTAAAAAGTGCAATGGATTAGATTATGCTATTAGTATAAAAGCATGTTTCTGTTTCTTAGTTTTAAGGTCATTTAATGGAATAAAGATCACAGCACCGTGTTC EMBV3_05940 CATATGCTGCAAGTGAGGATGTGGCAGCTTTGGAGAGTCAACCTTTACTAGGATTCACAG Gene GeneID:539481|FGD6:XM_002687205:63_cdna Constitutive 0 NULL GeneID:539481 5 GENE FGD6 NULL FYVE, RhoGEF and PH domain containing 6 EMBV3_07242 CCTACCTACAAGATTTGGAAAGAAGAGATTTCACTGGGCCTCATATAATAATGATTTAGG Gene GeneID:535260|FAM151B:NM_001099713:10_cdna Constitutive 2 NULL GeneID:535260 7 GENE FAM151B NULL hypothetical protein LOC535260 EMBV3_18433 AATTGTTTTGCCAACTGGAAGCAGCATGTTTAAACACATTTCTCCCTTAATAAAGGGTGG Gene BVT0102_041110 + 0 NULL GK000008.2:16271963-16370801 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226968 TCONS_00226969 TCONS_00224510 2 XLOC_138124 XLOC_137545 Coding TCONS_00224510 XLOC_137545 Coding Coding LINGO2 8:16031539-16277711 j TSS168333 8506 1 TCONS_00224510_5 606 0.0320949917705149 2 0.965454907361143 0.000297698034908769 0.00029865186672598 7.86276766153649e-05 8.77859404767774e-05 1.4877821739765e-05 0.000229510268153849 0.000161497485628074 0.000112317421971737 0.000297890746512849 8.67239723595078e-22 4.90387568270061e-10 3.26655153781313e-08 2.48473706931482e-06 5.3019520322917e-05 1.32026883437785e-07 5.98599683415048e-14 0 2.09737636225664e-13 2.82115447440526e-05 0.000196952925804633 5.77735280128144e-05 6.9103914316998e-77 5.9674543214837e-14 4.95832157151458e-14 1.17012037407597e-07 0.000337418788425237 0.000345780963257216 3.04461198988029e-14 8.08745373020184e-36 6.75902550394366e-11 XM_590571.7 LINGO2 PREDICTED: Bos taurus leucine rich repeat and Ig domain containing 2 (LINGO2), transcript variant X1, mRNA. 0.0 4819 100.00 0.314013637432401 NM_001258282.1 LINGO2 Homo sapiens leucine rich repeat and Ig domain containing 2 (LINGO2), transcript variant 2, mRNA. 0.0 3570 90.35 0.308488126028686 TCONS_00224510_5 sp|Q7L985|LIGO2_HUMAN LIGO2_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2; 0.0 1240 98.84 0.998349834983498 9 coding 0 0 0 0 -1.07802418478655 0.0537019055001603 0.0224814842076468 0.700571215118327 CCCTCAGCCCTTTCTCTACTGAGGAAGTTGAGGCTTAGCGCGCTGGTAAGTAGCAAAACCGGGAGTTGAACCCGAGCAGCTTGGCTCCAGAAAACAAGTTCTTCAGCCCCACCGCAGAGAAACTGCCCGTGACCAAGGTGTAGACTAAGACGGGGAGTCATGCTTCACACGGCCTTATCATGTTGGCAGCCATTCCTGGGTCTGGCTGTGGTCTTAATCTTCATGGGATCCACCATTGGCTGCCCTGCTCGCTGTGAGTGCTCGGCCCAGAACAAATCTGTTAGCTGCCACAGGAGGAGGTTGATCGCCATCCCAGAGGGCATTCCCATCGAGACCAAAATCTTGGACCTCAGCAAGAACAGGCTTAAAAGCATCAACCCCGAAGAATTCATCTCTTACCCTCTGCTGGAGGAGATAGACTTGAGTGACAACATCATTGCCAATGTGGAGCCAGGAGCCTTTAACAATCTCTTCAACCTGCGTTCCCTCCGCCTGAAGGGCAATCGCCTAAAGTTGGTCCCTTTGGGGGTCTTCACGGGCCTCTCCAACCTCACCAAGCTTGACATTAGTGAGAATAAGATTGTCATTTTACTGGACTACATGTTCCAGGATTTGCATAACCTGAAGTCTCTGGAAGTGGGGGACAACGATTTGGTTTATATATCACACCGGGCCTTCAGTGGGCTGCTTAGCTTGGAGCAGCTCACACTGGAGAAATGTAACCTCACTGCAGTACCCACAGAAGCCCTCTCACACCTCCGCAGCCTCATCAGCCTGCACCTGAAGCATCTCAATATCAACAACATGCCCGTGTATGCCTTTAAAAGACTGTTCCACCTGAAACATCTCGAGATTGACTACTGGCCTTTACTGGATATGATGCCTGCCAATAGCCTCTACGGTCTCAACCTCACCTCCCTCTCCATCACCAACACCAACCTATCCACCATCCCCTTCCTTGCCTTTAAACACCTGGTCTACCTGACCCATCTGAACCTCTCCTACAATCCCATCAGCACTATTGAGGCAGGCATGTTCTCTGACCTGATCCGCCTCCAAGAGCTTCATATAGTGGGGGCCCAGCTCCGCACCATTGAGCCTCACTCCTTCCAAGGGCTCCGCTTCCTTCGTGTGCTCAACGTGTCTCAGAACCTTCTGGAAACTCTGGAAGAGAACGTCTTCTCCTCCCCGAGGGCTTTGGAGGTCCTGAGCATTAACAACAATCCTCTGACCTGCGACTGCCGTCTCCTATGGATCCTGCAGCGGCACCCAACCCTGCAGTTCGGTGGCCAGCAGCCCATGTGTGCTGGCCCAGACACTATCCGAGAGAGGTCATTCAAAGATTTCCACAGCACTGCCCTTTCTTTTTACTTCACCTGCAAAAAACCCAAAATCCGTGAAAAGAAGTTGCAGCACCTGCTTGTGGATGAGGGGCAGACGGTCCAGCTGGAATGCAATGCCGATGGAGACCCTCAGCCTGTGATCTCCTGGGTGACACCTCGAAGGCGGTTCATCACCACCAAGTCCAATGGAAGAGCCACCGTGCTGGGTGATGGCACCTTGGAGATCCGCTTCGCCCAGGATCAAGACAGCGGGATGTATGTCTGCATCGCTAGCAATGCTGCCGGGAACGACACCTTCACGGCCTCCTTAACTGTCAAAGGATTCGCTTCAGACCGCTTCCTTTATGCCAACAGGACCCCTATGTACATGACCGACTCCAATGACACCATTTCCAATGGCACCAACGCCAATACTTTCTCCCTGGACCTTAAGACAATACTGGTGTCGACAGCCATGGGCTGTTTCACCTTCCTGGGAGTGGTGTTATTTTGCTTTCTCCTCCTTTTTGTGTGGAGCCGAGGGAAAGGCAAACACAAAAACAGCATTGACCTTGAGTACGTGCCCCGAAAAAACAATGGTGCTGTCGTGGAAGGGGAGGTGGCTGGACCCAGGAGGTTCAACATGAAAATGATTTGAGGGTTGGCCGCTCCAACTATTGTTTCCGTGTCATTGTCTGTAACCAGTGAGATGGCCTGGCACAAGAAAAGTACTAGGTTAAAAGGCAGCTTAGTGCAGCTTCCCCTGTGTCAAAGCAGGGTCCGCAGAAGCAGGAGGACTTGTGATGGAGACGCTCCACCTAGAGGCAGGCAGGCATGTGTCAGAGCCCTTCACACAGTGGGGTACTAATTGTTTGCATTGCAAATACTGGCATTCTGGGGATCTCAGTAATGAACCTGAAGCTTCGGCTCATGCTCGTGGACAGTTACTCAACCTTTTCTACCACTGCAAAAACAAAAGAAGAAATCAAAAGGAACAACCTACAATGTAGGATTTACGTATTAAAAAGACGCATTTGTCTAAACCATACTCGACAGAAACATTTGTATCTATGATTCTCCTTTGTTAAAAGCCTTGCATCATCCCATATTGTTGGTTCAACACCACAAAGAAATCAGTATATTCTTTACTCTTCTCTTTTTTTTTGGAAACATATATGCTGTATATGTTTTAAAGCAATATGAATGAGAGGTTGTGCTTTTTAGTTACACACCACTATCAACCCAAGTGTGACTTCACCTTCCTTTACATAGAGATAACCCTGAGACTAGATCCCTGGAGTTATGGGTGGATATATGTGGAGAGATGAGTTTTGTCTGATGTAGGATGCCAAGAGATAGGACCCAAGGCAAAAATGCCCAACTCTGTTAACTTCTGTTACTATAAATAAAGGCATGTGCCTAGTTTTGATACAGAATGGAATATTTTTTATACTTGTGATATCACACTGGACCAGTTTACTGTAACAAAGCCTTTGGTTTCTCCAGAAAGTGGTGTGTCACTGTTTATATCTGTAAAATGCAAGGTAGGTGTCAGTAATGAAACTTATTCCTTTAACCACAGCTTGATTTTACTTTCATCAATTGCTACTAAGGGAAGAGGATGTGATGTTTATATCTACTCCTAGGGTAATATTCAGCTCATAGCTAAGATCAAAAAAATTCAGATGTGTAAAGCTCTCTGGATAATAAGTTCTTCTCAGATGCCAACAGAAACCAGGGCGATCCATACAACTAAGGATCTGTTTAAAAAACAGTGTTGTCTGAAGGCTGGGTCACTGCCAGTCTGAGGAATCATCTGGCTACTGCACCTCTGATGTTGTCTATTCAAATACTCTACACACAGTATCATCTTAAATGCACAACTCCAGGGTGTCTCTCTGCTTCCTTTCCGAGGAGATGTTGATTTTTATTTTGAAAGCTGTCTGGTGTAGACAAAGAAGACTCTGTCTTGTTTATAAAGAAGTGGCAAAAAATAAGGTGGATTTAAAAGCACTTACTATTTTTTTTTTCTCCACTGAGGAAAAGCTCATTTACTCCTATAAATAGGTTAACTATGCTGACACTTTCACCCCTCTGAATGAATTTGTCCAATTCAGTTTGTATTAATGATTGTTACTCAAGTGAAAATATTATCGTTCTTAAAAAATGGCATCATGCCATTCCCACCAGTGATCTGGTTCAAATGAGACATAATTCCATTTGGCTGAAGTCAGTGGTTTTCAAAGCAGATACAGCTGACCCTTGAACATGGGAGTTAGGGGGGGAATGACCTCCTGTGTGGTTGAAATCTTCATATAACTGATAATTGGCCCACAAGTCTGCATCCATGGATTCAACCAACCTCAGATCGCATAGTATCAATACTTGTAATATATATGGTTGAAAAAAAATGTGTGTATAAGTGGGCCTGCACAGTTCACGCCCAGGTTGTTCAAAGGTCAACTATAATCATATGATCTGGGAAAGCACTGATTATCGTGTATTCATGACATGTGATATAATGAATTAGCATAGAAGAGATAGATTTCTACACTTTTAACACTTTGAGAGGAACCTTAAAAACAGCACCCTTTGGTACAGTGCGTAAGCTGGAATAGAAGGTGTCTGGCATTTGTTTCTTGACATATCACATTGGAAGTTTAACTTTCAAAGAGCTGACTTTTTGCATATTTGAAATTTTGAGTGACTTCAGTAAAATAAAAGTGACCCCAATAAAAAAGTGACAGGTCCAAAAATTGTTTTGCCAACTGGAAGCAGCATGTTTAAACACATTTCTCCCTTAATAAAGGGTGGAAATGAGATAGAAAGATTGAAGAATGGACTGCCTGAGTAATTTTTCATTTGACTTTCCTGATGATTATCATAAACCATTTAGAAATTCATTTTCCTCTTATGGAAATTACCGTATTTATATCTAACAATGAGTCAAGACCTGCTATAAATTCTATCACAGTTCCAACTTGTATGGAAATGGAACAGAATCTTTCAAATTTAAAAATGAACAAAGTTAAAGTAGACAGAGTCTTCCAAAAGTTAGTGGAGAGTACTTTGTTTGGAATAAGTATTTAACTAATTGTCCAGCTGGAAAAAAAAAAAAAATAGAGAGAGAGAAACATTTAGCAGTTAATAACAGGGCTTTGAGATTCTGCTATTTTCTGTCAAAAGTGGACCAAAAAGCTTAGGCAAATGAAATTGGATTAAAGTCAACCCATCCATGAAAAGATTTAGTTATTATTCCACAGGAAGTAAAGAGACTGCACTCTCTTGGGGGTTTATATACTGTGATCCCTGGAACAAGTTATTTAGGATATTAATAAGTGTTCTTTCCAAAAAAGTCTCATAAACTAATAAGTTGGGGAAATGATGCATGCTATAACAACCTCTTAGAGGTTCAAAATATATTTGAGCCTAATAAATCTTCTAAGAAGTTCAATAAACATGAATGTTATTTAATTTTGCTTACCTTGAGGTTTCTCCAGCTTATTTGAGCATGAGGCACTTCTTTTCATGATATAACTGTTAAACATCTTGAAAAACTAGAGTTTCACAGAACCCAGTTCAGTTAACACTGGACTGGAATTGTACTCTTCTGAATTATTCCTAAACCCAATGTTTCCAAGAAGAATAAAATTACTATTTGAATTGGGTTCGAATGGATTACCAAAAAGTATGCCACTTGGATGAATGATCTGATCATACAAATGAACTGGCCAGAAAGTTCTAGGAGGAGCTGTGACTTTGTCTGAAGCATCATAGTAATGGATTTACAGGTAACTGAAATGGCCACTTGATTTTCTACATTCTATCTGTTCAGATCTTGGGTTCCTTTTTATAACTGTAAAGCTTTGATCTTAGGTTCCAATGACTAGAACTTTGAGGCTCTAGTATCAAACTTCACAAAGGGAATTTTCCCTTGTGACTTCAGCTTACCTCTTTATTAGATCCAACTAGACTGTGACAAACAATAATATCTTACATCAGCACATGGGACAAATTTTCCCCTAGTAGTCATCTAAGGGTCATCAATCTTCCCAGAGTATTTTTTTTTCAAACTATCCCAAGAAGAAATACAGTTGTTTGGCTCAGCATTTAATTCTAGGTTGACCAGTTCTCTGTGTATATTAAGCATCTTCAATGAAGTATACTCTCCAGGCATTAAATTTCAAGAAGAAAAATTCCCTGGCTAAAGACCTAATGGTCAGAGAATTGATTTATCTGTTAGAGTATGATAACTCAAATGATTTGGCCTAATGTGTTTCTGGCAAGTAATTTCTACTTTTCCAAATTCTCATGTTACTTTTTAAAAAATGTCATTGCATTTATGGGTTTTTCAAATATTCTCAAAGTTTGAAAATATAACCCTAGAATTGCCAAGACTTGTACTTCCTAGTCCCAGAGGACATTTTCATAACTCTAGCTTTGCTTAAGTTTCTCAGAAATTTTTCTTATCACCAACAACCCCACCCCCACCCCACCCAGTAGTATAAAGGCATTCAGGATTTGCTCTACAGTCTTCAAGGTTGATTCTTTTTCCATTGTTTGGTCAAATCTGTTCTCTTCAGTTCTCAGAGGAGAACTGAAGAAATTATAATCTTGCATGATTTTTTTTTAATCATTTAAATCTCACCTGCAAATCTTAAATTTTAAGCCTGACTTTTGTCACTTTCCATAACTCATTCAGAAACAAATATATAAGGTAGAAAAGAGAGGATGTGATCCTGGAGAAAAAAAATTTACTGGAGCCCCATGTAAATTTACTTACTCTTCCAGGACCTCCCTTTATTTCCACATCAAGACATTTGCTTTAACTTTAGTAACTTTTCTCAGAAGATATTCAGCATCACAGATATGTCTTGAAGCTTTCTAGAAAAAAAAAAAAAAAAATCATTTTCAACTTAGAAGGCTAAGTCCTGACCAAAAAAAATATATATAAAAAAAGTCTAAAGAAAGGTTGGAGGGAGACATGTCAATCCATTTTAATCCTATTTCCTTTCTAATTTTTATAGTTATCTTCTTAACTGAAGAAGCATCTTCTTCAACTTTCATCAGTGTCTTTTTTTATCCCTATTACCTATGTCCAGGTCATGTTTATAGAACTCACATAAGCCATTCCAAATGGATTTTGTGCCACATGAACCTAGTAACAAAACATGTGGGGCCAAAGCCATTCACTCTACACAGTACTTAGGTAAAGATTTATCCCTTTATTCCTGGGAGTAAAGTCTTAGAAACATTCCCCATTAGACTAAGACATCAGGTGCCTGGTAATTTCCATTGACTTTCCACAGTTGGCTTTAAGAGTACTATCCTTTCTACTAAAATCCTTGCTATTTTCTGAAGGCGGAGTTCTGGAGTTATCCTTGCAATTGTTTATGGAAGGCCTTGAGGGATGAAGTATTGTCTGACTTGTTGATTTCTGAGTTCCACATTAGGTAGCAGAGTGTGCTTCCTAGTACTTTGGCAAACATTTGACATGAAACTCTATTACTCTTCCCCTAACTCCTTCAAAAACCATTCCATGGGGAGCCTTCTCAGTCTCACTCCAGCAAAAGTCCCGCTACAGGGAAGGACAGTTTCACAATGAACAAGATCAAAATGTGAACTGATTCACCACAATATTTAGCTAAATTACCTAGCAAAAAAGGTTGAGGAGCCATCGGCCTGGATTGGCAAGATTTAGCCAAGTAAACTGCGTTTTCCACTAACGATTAAAGATAGGTTTCCAAATCTGACGTTGGCTTTTCTGTTTTGATAGCAGTAAACCTAGCTGAATATTTTCTCAAAAAACATCAGAGAATGGAAACCGTGTTGTAAGTTTTTCAACAAGTTGTCTAGGATAAATGTTTGCACCCCCGCAAAAAAAAAAAAAGACAATTAGGAAGTTTGTAAAAGCTTTGATTTTCTAAAACAGGCCTGAACTGAAATTGATGTTCCTCTTCCAAAATATGGGAATATAATCAAGACAAACTTACATGTACCCCAGACTGCCCTTCTCCAGTTGGCCAAAGTCTTTAAGACCTCTTCTCCCTCCCCCTCCCCCACCTTCTCCCTAAGAACATACTGAATAGGAAGGAGGAAAAGAACATGGACCACTGAGTCCCCTGAGACAGCTCACGGAGACAGGAAAGCTTTGGTACCCCCACCCCCGATTCCTGCCTCCTTTCCTGATGCCACCACTGAAAGGATTCCGCATTCTCCAGCTCTCCCTGCCCCACCACTGTCATCTCCCAGCTGCTGTCACACCCTATCAATGAATGTTCTCTCCAGGGAAAAGTCTCCTTTCATTGGTACTCAGAAATTCCTAATTGTTAAACCGGAAATTCCTTTTTTTTCAAAAGCCCTCCACTTAAGCCCACAGAACACTTAAAAGTTAAGACTTACCATTCACATAATTACAAGGTGACAGCAATCTGCAGGTTGAATGATTCTAATTTTTTTTTTCTCTCTCTTTCAGAAGCAGGTGGGTTGATATAATGCCAGCCTTAAATAGAAGCTTTATTTATAGCCTTAACAGAATGAGCAAAGAGCTGGCATAATCAAGAGAGTACTGCATATTTTAAGGAAGGCTTTACCTTTAATATGCAAAATAGCCATTAGAAGACAACAAAATGCAAATGCACATTCTCCTAAATTGGTCAACTGTATTAATTCCAAAAAGTTCAAAAGATAACTTTCCGTACTACAAATGGGTCAGAGTCAAAGATGTATCTATCCTACAAGGACAAAACAGAAAACACCCCAAAAACAAAAAATCACCCCAGAAATTCAGTTGCCATGTTAGCTTTCTTCATTCACTGCAAACCTCCTATTCTAAATTACTTTAATATATTTGATCCCCACTACCATGAAATCAATACTGTAATGCAATGTAATCAACAAACAATGATTATGCAGGAGAGTAAATCAGACTTTCAACAAAAAAATTCAATCTTTACCACAATGTGTGTCCAGCAACACACTGAGTCAGACATACCTGTGTGATGGCAAGAGACAGAAGCCACGTCATGAACAAACTCTTTCCAGGCTGTTTGGAAAGAACCATGCTCTTCTCCTTCCCAGTTATAAAATCAGGTGTACCACACACAACACACTTGTGTGTTGCTTTGATACACAACTCAGTTGTCTTCTTATGCTTTATCCTTTTCCTTATAGTATGAAATGTC EMBV3_21294 CTGCTGATGCTGCTGATGAAACAAGTAACCCAAACCGCACAAGCGTGATTTGCTTAGTGG Gene GeneID:507302|LOC507302:XM_002700279:22_cdna Constitutive 0 NULL GeneID:507302 X GENE LOC507302 NULL similar to SMEK homolog 2, suppressor of mek1 EMBV3_11591 AGTTCTGAGGAGCAAAGTCAAGATTTCAAACCGAGCAGACTAACTCCAGAGCCGCATGGC Gene BVT0101_014552 + 0 NULL GK000014.2:71642583-71743471 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052238 TCONS_00052242 1 XLOC_031411 Coding TCONS_00052238 XLOC_031411 Coding Coding TP53INP1 14:71736862-71753458 j TSS38797 6408 1 TCONS_00052238_3 240 0.109862671660424 5 0.61416089183489 0.00546943842618266 0.0042236912622526 0.00519499364249179 0.0036662842374604 0.00292176811422093 0.000420942468904264 0.0026772901725295 0.00595668342985557 0.00644854501628732 0.000200093504553031 5.37036797442851e-05 0.000143973742385749 0.000507099503225044 0.000546587650131412 0.00162982945627709 0.00103910362715467 0.00166538195414215 5.81634237640611e-07 0.0018696146827666 0.0047714289091627 0.000471114424703355 0.000337114815701486 0.000317321662970693 0.000673105571064534 0.00391125224734504 0.00510959731473138 0.0026932980067188 9.95463512930535e-07 3.06623720362562e-05 9.76414243986275e-07 XM_005215685.1 TP53INP1 PREDICTED: Bos taurus tumor protein p53 inducible nuclear protein 1 (TP53INP1), transcript variant X2, mRNA. 0.0 1.028e+04 100.00 0.889669163545568 NM_033285.3 TP53INP1 Homo sapiens tumor protein p53 inducible nuclear protein 1 (TP53INP1), transcript variant 1, mRNA. 0.0 4702 79.20 0.84394506866417 TCONS_00052238_3 sp|Q96A56|T53I1_HUMAN T53I1_HUMAN Tumor protein p53-inducible nuclear protein 1; 8e-152 427 90.83 0.995833333333333 1 coding 0 0 0 0 0.412709912262642 0.282010239172878 -1.69115820933362 3.0901714593316e-05 CTGAGCCTGGCCCCGCCCCAGGGCGGGGCGTGCGGGCGGGCGGGCCCGACGGGCGGGCGCAGCGGCGGATCAGCTGTTCCGAGGCTGCACAACAACAAAAGGAGCGGGACGCGCCGGCAGCGGCCAGCGGCGCGGCCTCAGGAGGGCTGGAGCGGCCCCGCGCCCCGCCGTCCGGGAGCCGCAGCTACCTCAGCCGCCCGCGAGCGGGTCCCCGCCGGCTGCCTTCGCCGCCCGTCCGGCCGCGGGTCGGGCCCACGGATGAGAAAACCGAGGCACTGAGAAGTTACTGTATATCCTAAATACACACAAGTTCTGAGGAGCAAAGTCAAGATTTCAAACCGAGCAGGCTAACTCCAGAGCCGCATGGCCTCAAGGGATGATGGCTCTTCCTGCTTCTCACCTAAGTTGAATAAGCACCTTGTGCACTTTAATCCCCTGTCAGCGGCATCAGGCTGACCGAAGACAGGTTTTGGAAATCTCAGCTACAAAGACATCCAGCCAAAGTCTCAATCTTGCCTTAACAATGTTCCAGAGATTGAATAAAATGTTTGTGGGTGAAGTCAATACTTCTTCAAACCAAGAACCAGAATTTAGTGAGAAAGAAGATGATGAGTGGATTCTTGTTGACTTCATAGACACTTGCACGGGTTTCTCAGCAGCAGAGGATGAAGAGGAAGAAGACATCAGTGAAGAGTCACCTCCCGAGCGCCCTTCAGTCTTTTCCTGTCTCCCTGCATCTCTCGAGTGCTTGGCTGACACGAGTGACTCCTGCTTCCTCCAGTTTGAGTCCTGTCCAATGGAGGAGAGCTGGTTTATCACCCCTCCCCCATGTTTTACTGCAGGTGGATTAACCACTATCAAGGTGGAGACCAGTCCTATGGAAAACCTTCTCATTGAACACCCCAGCATGTCCGTCTATGCTGTGCATGAGCCCTGCCCCAGCCTCAGCGAGGCCCACTGTGGGACTGAGGAATTTCATAACCCAGGCAGTCCCAGAGTGGAAGCCGAGAATGAAATGGGGCAGCACATTCATTGCTATGTTGCAGCTCTCGCTGCTCATACAGCTTTTCTGGAACAACCCAAGAGCTTTCGCCCTTCCCAGTGGATTAAAGAACACAGTGAAAGACAGTCTCTGAACAGAAATAGCCTTCGTCGCCAAAATCTTACCAGAGATTGCCACTCTCGGCAAGTCAAGCACAGCGGCTGGGCTGTCCATCAGCCCTGCCCACGTCAGTACAATTACTAAGAATCTGAAGTGTGTTCGGTTGGTTTCTCATAGTTTGTGCATATGTGTGGGCATGTGCATGTATGGACGGTGAAGATGCTGTCTCTTTACAGCCAACAGATGACCAATCACATAGTTTTATTGGTGTGTTTAGACACTATCTTGAAAACCAGAGTTATATGCTGGGTATCACGTAATGCCTTGCTCTTAACATTTGCTTTTTTTGTAAAAATTTTTTCAGAATATTTTTGGAAACATATCAATACAGTTAGTGTTTGGGAAGGTCTTTAAAGCTATTAAGATGTACATGAATTAGCAATTTAAAGATGTTTCTTCCCAAGTACGAGAATAGGCATCTTTCTATTTCATTTTATTTGGTATTAACCAGTCTTTTGAGTAAGCAGAAATTTATTCTCAGGGTCAGCCATACACTTTATTGACCAGTACTTGATAATCTTTTCTGTATATAATGAATACATTTTTACACACTAACATGAGCATTAACAGGTGATGTGGTTGCCATAGATAAAATGGAATTATGGCTGAACTTTCTTTTGGAAGAAAACTTGATATATTTCTGTGTGTATGGGGTTTTTAATTCCCAGATTAGCCATGCAGTTCATTTTGGAATTCAGGTACATTAAGTGTTAGTGAACAGTGCATTCAATAATTCCGATGTGACCGTGTAACGTGGTACAGATATTACAGCGTCGTGGGACAACAGTGCCCGTCTCATGTGCAGAGGGATTCAATTCGACCTGTGAAATTGTATTTGGGGAAATGTGTATCTGTAAGTAATCCATTGGTCCACTGTTTGGATTCTTTCCTGCCAGCTCTGCCTACTTGCCACCTCACATCAGCTGTAAATTCAGAAGTACGTGTCCTGTACTCTAGTGGCTTCCTATTCATATCTGCCCAGGGGAAAAGAGAGGCTTTGTATTTCTGATACAGTGATGGATCTTCTGCTATGGAGTCTGTTCCGCCAGCTGGCAAGCAGCGGTGAAGGGGATTCCTGGTGACGTCTATTCGTAGCATCTAAATGAAGAGTGACAGGTTGAGTTTTTCCTTGAGTTTATATATATATTTTTAATTTGGGCTTCAGGCAAATTCCTTAACCACTTTGGCCTTTGGTACCTCCACCCAGGAGGGAGTAGTAACACGTACCTCCCTCCCAGTCGTGAGGACCGGGTACTGATTTGAAGTGGGGCTGTCCTGAACTGATCCTCGTATGAAATTCCAAGGGCCTCTCTGCCGAGTCTAGTGAAGGGGCAGGGCCAGGGTAGCTCTTCGGCCACAACTCCTCTTCAGAGTGTTGGTGCTCATGAGGCCAGGGTGCAGGGTTCGAGTCACACCGAGGCCAGTTAGCTCAACGAACGCAGAGAAGACCTATTTCTTTAGCTCTAGCCAGTCACTTTATTTTTTCGCAGTTGTGATGGGTTTTGCTGAGCCATCTGCACTCTCACCAGTTTCCTCTGAAATTAAGTTAAACACATTTACAATCCAAAGCACATTCTACTGACAGAGCAATAATACTATCACCTTCATAATCAAATAGCTTATTTTTCCATTCTCCTCTGCAAACCTAATTGAGTACATGACTAGACAGTGTTGTCAAGGAAAAAGCAGCATATAGTGTGAAGTACTGTTTTATTCAGTAACCCTGTAGCAGTTGGGTGCAGGGAACCATGGGAGACTTTGCAGTGAAGAGCTGCCTCTTTTCTGACCAGATTGGGATGTGTGGAGTCGGAAGAGGTCACATAGCTTAGTTAGACGGGGGTGGTAGGTTGTTCCTCCACTACTGGCTGTGCTGAAGGGCCAGGAATGTCTCTCCAGAACAAGGGTCTAGATCCCCCTTCTCACCTTAGTCCCCTTCCATTTCGACTACCCCTTTATTTATTTGTTTTCCTCATTAGGGGCCAAGTCTGTTAAGTTTTGTCAGACTGAGCTAGAAGTTGTTTTGTTACTATTTGTGTTTACCAGCCTTGGGAGATAGCGTGTTCATGAAGGTGTGTGTGTTTTATACCATGACTGTTAAAGGGCCGCATGTTGCTAACTTGAGCATAGGTGTAAGCCTCTGAATACATGGGGTCTCTTTTTTTCACATACTAAATGTAAGCTGTTAGTACCTCATGAGCTTCAGAAGTTCAGCCATGAGAATTTGTTTGGCAGCATGAACAGATTTGTATATAAAACTGCAATGGTCTTTACTATTTTTTCAGATTTCCTGATACCTTAAATACATTTACATCTCTATCAGTTACTGACTTTTCGTTTGCCTTATTCGAGCCAGGTTTTTTATGCTTTGTACCTGGAAAACAATTGACTTCGTCTTTTCAGTGTTTTTTCAGGGTAAGGCCTACCACGTATCTGTGATACCATACGGTGGTTTCTGCATCAGTGTCCAAGGCTTCTGTCTAAACTGGCCCATGTAAGAACTGAAGAAAGTGGTCACCTAATGCAGTTCTTGGCCATCACGTGTGTGAGGGATCGACTGTGTGCAAGTTCACAAGACCAATAATAACAGAGAGTGCTATTGACCTGTTAAGTATTCTTTGAAACAGGGCTGAAATGCAGCTTATTATAAGTTAATTATTATTTTTGCTGTTGTAAATATAAATGGTTTACAGTGTGCTTTAGGGCATATTTCTTAAAAATTCCAGCAGTGAGAAATAAAACCCCTTTGAATTTAGCACTCTGGTTCTAAACTGAAAAGTCTGGAATATGTGGTGCACACAGCAGCTTCATGAATGAGTTTCTTAGTTTTTATAATGCACCATGTTTCTCAAAGTTTGTGTTTTTCATTTTTAAAACATTTTATGATGTATATCTTATGTTTATTACTTTTCTTCCTCAAATAATTTGATTATGTACTGCACCATAAGTTGAAAATTAACCACCCATTATTTATCTTCTGTGGGAATTTATATGGTTGGGTTGGGGGGAGGGGAGGGAATTTTTTGCAGAAGGTGCAGAGTGATTGGATTTACTACTTATGGTTCCAGGGAGCCTTTTTACATTGCTGTCCTGTGCATTCCCCAGTTCTGATGCAAACTGTTCTGTTTACATACCTTCTCTGTTGTGTCAGCACTCTGATTCTAGTGAGGTGACAGTTAAGACTTCAGAGGGCCGTTCAGCATTGCCTAATGTTTTTGCTTCTCAAATCTGTGTAGTACACTGGTTTGTAATCTTTGTGTCTTCATTGAACCTGAGTGTCTTTGCTATTTCTCTTCTTCCTCAAAGAAATATATTGTCTTATATACTCTTTTAAGAAAAAAGAGTAAAGAAGGGTATCTTTCTTTTTCTCATCTTCTTTGAGTTGGAAACAAAACAAAAAAAGGACTCTAGAAGATAGACATTTAAATTTAAATAGCTTAGTGGAAAAAGTTTAAGAGTTTCCAATTATTAATCTTTGTTTTTAGAATCAGTTAAGAGACTGCTCCTTGTACTGGAGATACTAGCATATGTTCGTAATGTTACCTTAAAATTATCTTTATTCTATAAGTCCCATACATACTGGTTAAATTCTTTAAAGAGTTGGGCCACTATCATGGATGGTTTCACTGCCATCGGCCCTGTTGATGTATTATAAATGGCATTATCTACTTATTTTAATGCTTAAAGTTTTATATAAAACGCTTTATTTAGAAAACTTACATAATATAGTGGTGTCTGCCTTGCCATGTACCAATTTCACTTGAAATTTGACACCAATTGCAGTGGTCTGGGGTGGAGGAGGCAGTCCTGGAAAGCACACAGATAAGGATATCTTTTTCTGTCTGCAACAGTATCCTTTATGTGGGAGAAGTTACTATTCCAAGAAAGGCAGCTTAAGTGGATAATGTTTTGTGTGTCACTGACAGTTTTTCTTAAAATATTTTTTTTAATTGTGTAATTGCTAAATGCCCAATTTTTCTCTGTATTTGCCTGAAGTTTTAGTATTTGTTTTCTAGGTTGACTTCTAAAAACCAAACCAGTGCTTGGGGAGGTTAGATGTGTCTGTTTCCAAGCTTGGTGTGTATGAGTGGTTTTGCTTGTGTTTTCCTCCAGAGGTTTGGAAATCTTAATCAGTAATGTGTGTATTATAATATTTTAAGTGGCTTTGGTGTTTTTTTTTCTCCATCAAGTAAAATTGTGAACACATTTGCTTTTCAAGGGCAGGGCATCTGTTCTAGAGACTGAAGAGTATTGTAGGTTGTACTCTGCCTTCTTGATGTGTTTCTGGACAGTTTTTTTTTTTTTCCAACAACTTGAAAACTTAAAAGGGACATTTGGTTAGGTTATATACTGTACATCAATCTATGCATAAATGGCAGCTTGTTTTCTTGAGCCACTGTCTAAATTTTTTTTCTGTTTTTATAGAAAATTTTTGTACTGATTGGTTCATAGATGGTCAGTTTTATACACAGACTAAACAATACAGCACTTTGCCAAAAAATAATTGTAGCGTTGCTTAAACATTGCGCACCAACACCAGCTCTTTGGAATTGGGTTCAGTGGTGTATTTTGCACTACCTGGAGTTACGGTTTTTAATCTGTCAATAAATAAAATGTCCTTTACCTTCACATTTGTCAGATTCTTTTATCTTTATGGTCATTAGTCTTAAAAACTAGGTACAACTTACTTAATCAATTCGGTCACTCAGTCATGTCTGACTCTTTGCAACCCCATGAATCGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTCCACCTAAAGCCATGTCCATTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAGTCTTTCTCAGCATCAGGGTCTTTTCCAATGAGTCAGCTCTTCGAATCAAGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAGTGAACACCCAGGACTGATCTCCTTTAGGATGGACTGCTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTCCAAAAGCATCAATTCTTCGGGGCTCAGCTTTCTTTACAGTCCAAGTCTCACATCCATACATGACTACTGGAAAAACCACAGCCTTGACTAGACGGACCTTTGTTGACAAAGTAATGTCTCTGCTTTTTAATATGCTGTCTTAAAATGAATGCTTTTTAGTTTTACTTGTCCAAAAGATACATTTAATATATACTTTACT EMBV3_10996 CCCCACAGTTAGTTCTTGTTTTCCTGTCTCTTAGACCTCAGCAAGCACTGTATTCATTAC Gene GeneID:617336|SHISA2:NM_001101265:82_cdna UTR3_Alt 1 NULL GeneID:617336 12 GENE SHISA2 TMEM46 shisa homolog 2 (Xenopus laevis) EMBV3_21724 TCTCAGACACCCTTTCCACTAGCTGCCTTGTGCCTGTTCCTGTCTTTGTTGAGCTGTGTT Gene GeneID:533746|DPYSL2:NM_001076000:1_cdna UTR3_Alt 2 NULL GeneID:533746 8 GENE DPYSL2 CRMP-2 DRP-2 TOAD-64 dihydropyrimidinase-like 2 EMBV3_10937 AGGTTAGATGGAATCAACTCCACCAAGGCTGCACTGAGCCCAGGGATTTGGAAGTGAGCA Gene GeneID:518991|TMEM129:NM_001076864:6_cdna Constitutive 0 NULL GeneID:518991 6 GENE TMEM129 MGC142854 transmembrane protein 129 EMBV3_22911 CCACACAGCTAAAAGCAGAGAGAAGCCACTGTGATGGGCCCCTTGATGAATTCCTGACAC Gene BVV0102_196464 + 0 NULL GK000007.2:47450748-47493408 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32717 TGAGCCCTCTGCTGAAGCTCGCCTGCTCTGACACCTTTCTCAACAATGCAGTGGTATACA Gene GeneID:789246|LOC789246:XM_002688584:299_cdna Constitutive 0 NULL GeneID:789246 7 GENE LOC789246 NULL similar to olfactory receptor Olfr374 EMBV3_29086 AAAAGTCGTGGAAATACACCCGTATCAAAACGCCCCTCCCCCTCGTGACCCTACCCCAGA Gene BVT0102_220028 + 0 NULL GK000015.2:21877554-21889541 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15785 GGCGAGCGCCGTTCCGAAGGGACGGGCGATGGGGAGAGGGTGTAAATCTCGCGCCGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07052 ACGTGGAGTCTGTCCTTTCATACGGCCTGCGATGTGCTTTGTATATGAACCCCCTGAATG Gene GeneID:512548|SLPI:XM_002692474:544_cdna Constitutive 0 NULL GeneID:512548 13 GENE SLPI NULL secretory leukocyte peptidase inhibitor EMBV3_12690 TTCAGACTTGGAGAATGAATTTATGATTGCTGGTGGGGCAGGGGGAAGGGATAGTCAGGC Gene BVT0102_219121 + 0 NULL GK000004.2:66492327-66610953 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188201 1 XLOC_114244 NonCoding TCONS_00188201 XLOC_114244 NonCoding NonCoding - 4:66600521-66600922 - TSS140569 401 1 TCONS_00188201_1 59 0.593516209476309 1 0 0 0 0.000207696164568757 0 0 0 0 0 0 0 0 0 0 0 0.00214355523464198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 3e-41 172 83.95 0.401496259351621 0 noncoding AGCAAGGGATCTGGGCTCTGCCTGGGCTGGCGTTTGAGGAAAGGGGTGTGTGGGGTGGTTGGAGTTACTCAGGGGTGGGAAGGACTTCCCTTCAGCCCTGAGTATCTTAGAGCACACGGGTCTAAAGGCAGGATGTGCCCTTATATGTGAAATCTAAAAAGAAATGACACTATTCAGACTTGGAGAATGAATTTATGATTGCTGGTGAGGCAGGGGGAAGGGATAGTCAGGCTGTTTTGATCCCTAGGTCAGGAAGATCCCCTGGTGAAGGGAACAGCATCCCACTCCAGTATCCTTGCCTGGGAAATCCCACAGACAGAGGCGCCTGGTGGGCTATAGTCCGTGGGGTCACAGAAGAGTCGGATATGACTTAGCAACTAAACAACAACAGCTAATGAATG TCONS_00184337 . 5' 927 TCONS_00184337 . 5' 927 EMBV3_43619 CTGAGAGGAAAATGGACATAGGATTGAAGTAAGTTGGGTACTTGGAGAGTGTATGTGCCA Gene GeneID:281285|LRAT:NM_177503:17_cdna Constitutive 2 NULL GeneID:281285 17 GENE LRAT MGC134242 lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) EMBV3_34020 GCCCGTAGTCTCCAGAAACTAGGATTTCAGGACCCAATGTAAAGGCTGTTGCTACTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09812 GGTTGGAACAGGTATATCCGAGCTCTATGCAGGAAGAAGCAAAGCTGTTTCTGTGGTGGC Gene GeneID:529859|LOC529859:XR_084649:439_cdna Constitutive 0 NULL GeneID:529859 24 PSEUDO LOC529859 NULL similar to KIAA1632 EMBV3_11184 AGAATGATGGGACGTTGCATGGGAGCTGCACAGTTCGTGGGAGGACTGCTGATAAGTTCA Gene GeneID:781310|LHFPL1:XM_002699933:82_cdna Constitutive 0 NULL GeneID:781310 X GENE LHFPL1 NULL lipoma HMGIC fusion partner-like 1 EMBV3_18809 CTTTTGGTGTGTGTCCCCCAGATGCCTCCAACCTAAGGCATGACAATTCCAACATACTGG Gene BVV0101_075194 + 0 NULL GK000019.2:8193532-8321185 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01793 TCGGGGGCTTGTGGAGTGCTGTGGGATCGTCCACAGTGTGTGAGAGGGGAACTCCCATCA Variant GeneID:508463|SDF2:NM_001034321:79_cdna 86^259 2 EMBV3_22000 GeneID:508463 19 GENE SDF2 MGC128631 stromal cell-derived factor 2 EMBV3_08124 CAACTCATATCCAACTCTTTTGTGACCCCATGGACTGTCGCCTCTCTCTTACAAGGGCCC Gene BVT0102_031894 - 1 EMBV3_26887 GK000014.2:29793701-29830348 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23017 GTGCCAGACACTTTTGGGGTGGTGTTTAGGTGAACTGTGACTCCTTATTCTACTTCATGC Gene BVT0102_267755 + 1 EMBV3_39861 GK000028.2:9450921-9468534 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32903 GGGACATGGTGAATTTTAATATAAGGTCAGGCAGCAGGTGGCAGTGAAAAGCTCATGTCA Gene BVT0102_081227 - 1 EMBV3_22007 GK000018.2:48594086-48633597 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24583 TGCCCTACAGCACGGGGAAACTGCCCTATGGGGTTGGCCCCCAGGCTGCAGCAGCAGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38235 TCTTCATTTGTGAAATTCCTCCCTCTCGTCCCCAGTGGCTGGTTGATGAGCAGTATGGGG Gene BVT0102_302240 + 1 EMBV3_03723 GK000010.2:21369668-21379411 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32132 GCTCAGTGACCTCCTAGGGTTTCGATGTGCTGTGTTCTCATCCTACAGCTGGTTTGGTAA Gene GeneID:504482|WASF2:NM_001081511:75_cdna Constitutive 0 NULL GeneID:504482 2 GENE WASF2 MGC142483 WAS protein family, member 2 EMBV3_08937 AGGGACAGTCTTTCCCAGGTTCGCGCTGACCTCGGGCTCGACAGCCACCGGTGGATTCGT Gene GeneID:100139518|LOC100139518:XM_002686375:172_cdna Constitutive 0 NULL GeneID:100139518 3 GENE LOC100139518 NULL hypothetical protein LOC100139518 EMBV3_01305 TGTTCGTGGAACCAAGGAGCAAAGGAGGCTTCTCGGAGGTGATGGAGGCTTTCTACGCCA Gene GeneID:505721|RTEL1:NM_001097575:886_cdna Constitutive 0 NULL GeneID:505721 13 GENE RTEL1 RTEL regulator of telomere elongation helicase 1 EMBV3_36790 CAATGTGAACGAGGTCATCGAGATCCTTATGGAAGATTCGTCAGGTTGGTGGAAAGGCCG Gene GeneID:532964|MYO1F:XM_002688878:107_cdna Constitutive 0 NULL GeneID:532964 7 GENE MYO1F NULL myosin IF EMBV3_11958 AAAATGCTGGACCTGGGGCCCATTGATGCACTCAACTTCTTTTGCGAGCAGCAGCGCATT Gene GeneID:509114|LOC509114:XM_002692585:307_cdna Constitutive 0 NULL GeneID:509114 14 GENE LOC509114 NULL similar to hCG2040155 EMBV3_26875 CTACTAAGTGGGTTGACTTTGCAGAGCGTGGCCTGGGGAACAAGTTTAGGACTGATTCAA Gene GeneID:616057|RNF207:NM_001078057:204_cdna Constitutive 0 NULL GeneID:616057 16 GENE RNF207 MGC152241 ring finger protein 207 EMBV3_01381 GCTTGGGGACTGCTGTTGCCTGGGACTCAGTCTCACGTATCTCAGAATTCTCTTCACTAG Gene GeneID:509386|TSPAN17:NM_001014880:5_cdna Constitutive 0 NULL GeneID:509386 7 GENE TSPAN17 MGC134602 TM4SF17 tetraspanin 17 EMBV3_42185 TTGAAAAGAAATCGTTTATTAGCACCAGTTTCTTGCCACTAAGCTGTTTATTATACATCC Gene GeneID:516584|HIAT1:NM_001102038:113_cdna Constitutive 2 NULL GeneID:516584 3 GENE HIAT1 MGC139615 hippocampus abundant transcript 1 EMBV3_24044 TGGCTAGTGGCTGCCGTATTGAATGGTGCGGGTCTAGAGGATTCAGTGGGATGGTACTTA Gene BVT0102_177158 + 0 NULL GK000017.2:66691557-66827050 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34376 AAATAATCTAGGCATGAAAAGCAATGATATCCCTTCCGGAATCTTTAAAGCTAAAAATAT Gene GeneID:514433|ZIC2:XM_002691972:44_cdna Constitutive 2 NULL GeneID:514433 12 GENE ZIC2 NULL Zic family member 2 (odd-paired homolog, Drosophila) EMBV3_31349 GTTTGAAGCTCTGGGATTTCCTGCTCCGCTTCCTCTCCGAGAACTCCATGGTGCGGCGGG Gene BVV0102_443188 - 1 EMBV3_39636 GK000013.2:28477491-28565186 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042392 TCONS_00044874 2 XLOC_025657 XLOC_026300 Coding TCONS_00044874 XLOC_026300 Coding Coding BEND7 13:28425607-28495849 j TSS32889 1168 1 TCONS_00044874_2 343 0.086472602739726 8 0.983485428738201 0.000333389078113219 0.00127868670735967 0.00182958670929006 4.53442719685841e-05 0.00134154999040876 0.00125642142078695 5.58571991121333e-05 0.000319023048334309 1.72451618373156e-08 3.56489018329404e-116 4.81466919503445e-05 0.000232660506118584 3.27259321975232e-115 0.000358273913942641 8.23027291767975e-05 2.21075785859323e-17 0 0 5.03475910268177e-09 4.73230269995399e-07 0.00129252471089663 0 2.35542111565563e-05 8.61019960109709e-05 3.14851988248907e-07 2.92240105424506e-87 0.000226677697065521 2.46593747218434e-05 0 0.000406643115443973 XM_005194304.1 BEND7 PREDICTED: Bos taurus BEN domain containing 7 (BEND7), transcript 0.0 1898 96.08 0.949486301369863 XM_005252402.1 BEND7 PREDICTED: Homo sapiens BEN domain containing 7 (BEND7), transcript 0.0 1249 87.50 0.85958904109589 TCONS_00044874_2 sp|Q8N7W2|BEND7_HUMAN BEND7_HUMAN BEN domain-containing protein 7; 0.0 590 88.86 0.988338192419825 1 coding 0 0 0 1 0.0571754524763882 0.700482810978569 -0.00362715537467348 0.938032053147066 CCAGTTTGAAGCTCTGGGATTTCCTGCTCCGCTTCCTCTCCGAGAACTCCATGGTGCGGCGGGCGGGCAGGGAGGGGGAGAAACTTAAAGAGGAACCCCAGGATTTGGATGCGATTTGGCCTCAGCGTTTGAACTCTGCAGAGGCCCCCCCAAGCCTCCACCCATCTTCCCGGGGCACGTGGAACGAGCTGCCACCCCAGAGCGGGCAGTTCTCAGGGCAGTATGGCACCCGCTCCAGAACCTTTCAGAGCCAGCCCCACACTGCTGGGAGCTCCAATGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCCAACTGCTGCACTTGTAACTGCCAGTCGACGTTGCAGGCCATCCTCCAAGAGCTCAAGACCATGCGGAAACTGATGCAGATTCAGGCAGTTGGAACCCAAAACAGACAACAACCCCCAATTTCCCTTATCTGCTCCCAGCGAACTGCCGTCTCACGCAAGAGAAATAAAAAGAAAAAAGTGCCCCCAAAGACTGTGGAACCTCTCACTGTGAAACAGAAGCCCAGTGCATTGGAAGCTGAGAAGAAGGCTGCAGGGGCCCCCGAGAATTCCAGTCTCCCCGTGGCCGAGCACGCCTCCCCTGGGGAGAGCCACATTCTAGGATTCGGCATCGTGCTTGAATCACCAGCCTCCGATCCAGAAGTGCAACTTGCTGAAGGCTTCGATGTGTTTATGCCTAAATCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCATTTTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAGGACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACAGAAAAATATTGCACTGCTAATCACGTGGATAAACTTCCTGGCCCAAGAGACTGGGTTCAGATTCTGCAGGATCAAATCAAACTGGCGAGAAGAAGGTTAAAAAGAGGCTCAGCAGAGGCAGTTGACGGTGATGAACGGCTGGACAGTGTTTCTCTAACCCCAACAGGTAAAAAAGCCTGAGGCCCAGAAACACTAAATGACTTTCTCAAGGTCTCACAGCTGGTTGGTGGCCTGGCCGGAGCCCAGGCCTCTCAACTCCCAGCCGG EMBV3_00125 CTGCTTTTGTACCTTCTGGAGAAATTCGCAAAAGGCCAGAATGTAACGTGTATAAGGATC Gene GeneID:100295995|LOC100295995:XM_002689304:163_cdna Constitutive 0 NULL GeneID:100295995 7 GENE LOC100295995 NULL hypothetical protein LOC100295995 EMBV3_37531 TGTGCAGTTCAGGGAGACCCTAAGTTGAAGGGCAGCTTTAGGGCCCAGATGACCAATAAA Gene GeneID:507586|CGREF1:NM_001045977:75_cdna Constitutive 0 NULL GeneID:507586 11 GENE CGREF1 MGC137352 cell growth regulator with EF-hand domain 1 EMBV3_26782 GGGAAAAATCACTATTCTGTCTTCATTCTTCGCCTGTGGGTAGGTGAGAGTGCGGCCATC Gene GeneID:282295|ORP150:XM_002693131:570_cdna Constitutive 1 NULL GeneID:282295 15 GENE ORP150 GRP170 oxygen regulated protein, 150 kDa EMBV3_28927 GGGAACAACCGTGCCAGCCTTTCCGCAGAAAGAGAACGAATCCACACTTTCAGATGTTGA Gene GeneID:509040|APCDD1:XM_002697746:250_cdna Constitutive 2 NULL GeneID:509040 24 GENE APCDD1 NULL adenomatosis polyposis coli down-regulated 1 EMBV3_28393 GACAGCGGCGAGCAGAACTACGGAGAGCGGGTCTAGATCCAGAAGAAGTTCTCGGAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20287 TGAGCTGCCCTTCCTGTTCTCATGCCTGCAGGGATCTAAGCGCAAGGACAGAGCAAAGCA Gene BVV0101_015858 + 0 NULL GK000020.2:71279912-71293256 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09175 TTTCTGGAAGGAGGCACGATCATTGAGGCAGGAACCCACCAGCAGCTCATGACGAATGAA Gene GeneID:524959|TAP1:NM_001098058:143_cdna Constitutive 0 NULL GeneID:524959 23 GENE TAP1 NULL transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) EMBV3_23793 CCTTTGCACTCACCTTGGGTCCTCTGGTCTCAGTTCCCTGCCCACAAATGTATAAAAGGT Gene GeneID:523047|SUV39H1:NM_001046264:81_cdna Constitutive 0 NULL GeneID:523047 X GENE SUV39H1 MGC134617 suppressor of variegation 3-9 homolog 1 (Drosophila) EMBV3_20830 GTGCAGTGTATCATCCTAACCTGGAAACCATTCCTACTTTCTACCATTCTGCATTAAGTG Gene BVV0102_435325 + 1 EMBV3_12166 GK000011.2:66788488-66837189 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028131 TCONS_00028129 TCONS_00028130 1 XLOC_015415 Coding TCONS_00028130 XLOC_015415 Coding Coding FBXO48 11:66835548-66840282 j TSS19798 2555 1 TCONS_00028130_3 155 0.170254403131115 4 0.461018381576167 0.000839280670049921 0.000394546460509533 0.000520643155887845 0.000309686068086427 0.000390068548036139 4.16435886246079e-09 0.000187689451365897 0.000255318597320215 0.000356113136464021 7.64459475097867e-132 1.10589706461924e-19 1.2032272109111e-16 7.88261652537278e-06 7.0512541136125e-27 5.14672758225813e-09 0.00010939220797547 0 2.82219839832362e-08 6.14824739996307e-05 9.75766048317504e-05 0.000122034456095573 6.18244459673043e-13 9.87546587033185e-16 1.35076941234672e-16 0.000357897845974781 0.000211344481432241 3.96665328050764e-05 2.0327621207764e-15 1.30368292702131e-12 1.22790140630077e-13 XM_005212889.1 FBXO48 PREDICTED: Bos taurus F-box protein 48 (FBXO48), transcript variant 0.0 4381 100.00 0.950293542074364 NM_001024680.1 FBXO48 Homo sapiens F-box protein 48 (FBXO48), mRNA. 0.0 1186 75.96 0.640313111545988 TCONS_00028130_3 sp|Q5FWF7|FBX48_HUMAN FBX48_HUMAN F-box only protein 48; 3e-95 276 86.45 0.993548387096774 2 noncoding 0 0 1 0 -0.0211021874468005 0.870519822451213 -0.0214930295257179 0.717744148569405 GTGCGAAATCCGAGTCAGCAAGGCGGGGCTAGAGTGGGTGGGAAGACAGGGACTAGAGGGAAGGATTCGAATTCTGGACAATTTAAATCGCGAATCGAGAGGTAGCAGCTGCCCAGTAGGTAGGAGACGGGTCTTCCCTTTACGCTGAGATCTGGCAGGCGTGATCCGGGGCGCGGCCCTGGCGCTCGCACAGCCTCTGTTCGGCCGACCGGAGCTGCGGTGACAGTCGGTGCTGACAGTTGTTATTGTTTACCTGTCAATGCCCAGGTTGCTTTCTTACTTCCCCAAACTCTCAAGAGGAAATCTTATGTTGAACTCAGACATTAAAATTCTGACCACTGTAGCCAACTTGGATCCATAACCAAATGAACGGGAGCATCTGTGGTCTTGGCAGGTTTAGAAATATATAGGTTATTTATGAGGATAATTCACTAAAATACCAAGCTATGAAGAAAAACTCCAAGAGAAACCATGCTTCAAGAGTTTCTGACATAGAATGGAACTCTGTGGATGCCGAAAGGGAAAAAAAAGAGTGTCCAAATAATTTTGTTGAACTGCTGCCTCCAGAAGTTACTTTTAAAATTTTCAGTCAGCTAGACATCCGGAGCTTGTGCAGGGCTTCAGTGACATGCAGGAGCTGGAATCATGCAATAAGACACAGCGACTCCTTATGGAAACCTCACTGCCTGACTGTAAGAGCTGTATGTCAAAGAGAGATAGACGACGATCTAGAGAGTGGTTATCCCTGGAGGGTCATACTACTGAGGAATTACCAGAAGAGTAAAGTGAAACATGAATGGCTAAGTGGCAGATACAGCAACATATGTTCTCCTATCAGCCTACCAGAAAAAATCATGTACCCAATGGATGCAGACACGTGGGGGGAAATTCTAGAAGCAGAACTGGAAAGATAAGCAGAAAACTCTCCTAACTTTGAGAGTTTAAAACTAAAATGACTCTTAGATTATAAAAAGTATGTCTCTAACTGCCCATTTTTTTTGTTTGCCTTTTTACTATTTAACATTTAAAAGAAAACTAAATAGAAAATATAAAAAATAAAACTTTGTTTTTATTTTGCACTTTAGGTAAAATAATGTTTTATCTAAATGTTTCTGGTTTTACTGTAATGTGGAAAAACCATGAAATGTTATTTATTTAAAAATACTATACTGATAGGGTGATTTCAAAATGTATTATTTCATGTATTTGTGTTGGTCTGTTGCAGTACTTCAGCATTTTAATGATTAGAGAGTTTTATTAGTGTTCTCTGCTTAATGATAATTTGAAAATTCAAGAAACCATGTGAAGGAACTGATTTAGAGATTTATTAATTGTTAGACATAGGCTTATGGGCAAAATCCCTAAATGAAATTAATAGCAATATGTTTAAATGTATAATAAATGTATATTTTAATAACTTAAAATTTTCCATTTCAGTGCAGATTGAATTGTCAAACACTGAAAACATTTTGTGTTAAACATGTGGTTTAATTTTAAATGAGTCCAACCAGACTCATTTGTGAGATTAAGTTCCCCATTACTTGCCTACAAACCTCAGATTACTCTCAGGGGCTGAAATGTATGGAAAGTGCCATCAGAAACTCCACGCTGTTTTTCTTGGTAAAACTTATCTTCTTTCTGACATCTTATAGCACCATCTAGTGTACTCCTTGTAGATAACCAAGAAAAAGGACCAGCTCCTTTTTGGTTTTCCACATTTAAAAGAAAGGAAAATATTATTTACAAGAAACCTATATACTTGAATTTGTTAGAATTTATAGCTTTATAGGAACCTTTAACTTTTGTTCTCTTTTACTTAAAAGTAGATGACACATTACTCACGCTACGAGATTGTTCAGTCTGAAACTGTGATCAGCACCATAGGTAACGTGACTACAAAACATTTTAGTTAGTATGGGATTTTCTTCTTAAATTATGCTCTATTGCATGAAAAGTAAGAGTCCAGGAACTCAATATTTAACAAGTAGAAAAATATGAGGAATATGTCCCACTCTATACAGATTCCCTTTGTTGAATCAAGTAGGTGATGACTGGTTCAGTTCAGTTCTGTTCAGTTCAGTCACTCAGTCATGTCCAACTCTTTGCGATCCCATGGACTGCAGCATGCCAGTGTTATCTCCTACTGTCTTCTTGGGGTTGGAAGGGACCTTGAAGATCAGGCAGTCCAGTCTCTAGGATTATTCAGTAATCCCCACTATAGGAATGTTCTTCTTTTCACTCATCAGCAATTTTCTTCGTAAATTCTTTTGTGCAGTGTATCATCCTAACCTGGAAACCATTCCTACTTTCTACCATTCTGCATTAAGTGACCCTTTTAAGGTTGTGTAGTTCTTTGTACATACCATTCTCAAAGCTGTCATACTACATTAAATTTTCTGTTTGATTTGTGTATCTCCCCCATTAGATTGTGAGCCTCTTAATGGCAGGGACCATTTATTTATTTTTGTGTTCCCAAACCTGGAATATAGTAGATATTTCATAGAATTGTTAAGTTATTTTTATATTATTTATTTTAATCCTACCCAGAATGTAAA EMBV3_14321 TGTGCGCCCCTGCGCCCTGCGCCCGGGCAGATGCTGTACCCAAAAATGTTAATACACTGC Variant GeneID:533692|IRAK4:NM_001075998:27_cdna 65^380 3 EMBV3_38329 GeneID:533692 5 GENE IRAK4 IRAK-4 MGC137816 interleukin-1 receptor-associated kinase 4 EMBV3_41575 GTCCGGCTCACCTGACGTTAAACAGCGAAGGCAAGGAAGAGTTTGTGGCGACCTTCAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37077 GGAAGCCTCCATCGAGAGAAAAAACGTTTCAAAGGCATCAGCAGACCTCATGTCCTACTG Gene GeneID:783729|LOC783729:XM_002686523:711_cdna Constitutive 0 NULL GeneID:783729 3 GENE LOC783729 NULL similar to G-protein gamma-12 subunit EMBV3_38136 GGGGGATGGAGCAGGAAGAAGACTTATATTATGACGGAATTAGGATCCAAAGATATCTGG Gene GeneID:514175|TMEM144:NM_001101989:60_cdna Constitutive 3 NULL GeneID:514175 17 GENE TMEM144 MGC165857 transmembrane protein 144 EMBV3_04299 TGGGGGAGCAATAGCAGCCATCAGTTGGTAGAAGGCACACAGGAGAAAATACTACAACCC Gene GeneID:538029|HERC1:NM_001103282:106_cdna UTR3_Alt 2 NULL GeneID:538029 10 GENE HERC1 MGC142529 hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 EMBV3_33040 GCATGGTGGAATAGAAAGACAGGAGAAGCCTAGATCCCCATGGAACCTTCTTAGTAGCTG Gene BVT0102_110479 + 0 NULL GK000011.2:29438264-29626086 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10763 GCACTTCTAAGTAAACTCTTGACAGCAGCCATTATTTCTGCTTTAACTTATTTCTCCAGC Gene BVT0102_149467 - 0 NULL GK000007.2:27503416-27684800 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216250 TCONS_00216248 TCONS_00216249 1 XLOC_131199 Coding TCONS_00216249 XLOC_131199 Coding Coding PRRC1 7:27681912-27804719 j TSS161327 5355 1 TCONS_00216249_1 445 0.135574229691877 9 0.95646792501995 0.00194996177138378 0.00256591064799291 0.00126367779933843 0.00136180060842963 0.00105984176130928 0.000498234789593 0.00120238342368061 0.000386422725938233 0.00258691994429204 0.000476218129293506 9.87332977610316e-11 3.14681477132439e-05 0.000177138236598204 0.000539530470357053 3.06695622241818e-09 2.18362783810078e-09 7.41776225969721e-10 8.08690947119665e-10 0.00183527516236799 0.00236307539013354 0.000458998663676644 2.11504165633905e-09 7.54210161514749e-10 2.38980545968333e-09 0.00212293117643544 0.00140154792540462 0.00158981721619458 7.15467479191756e-10 1.15113955816265e-05 3.63598215841758e-10 NM_001206000.1 PRRC1 Bos taurus proline-rich coiled-coil 1 (PRRC1), mRNA. 0.0 3651 100.00 0.377777777777778 NM_130809.3 PRRC1 Homo sapiens proline-rich coiled-coil 1 (PRRC1), mRNA. 0.0 2953 75.44 0.818300653594771 TCONS_00216249_1 sp|Q3UPH1|PRRC1_MOUSE PRRC1_MOUSE Protein PRRC1; 0.0 734 86.91 0.993258426966292 1 coding 0 0 0 0 -0.391303481345634 0.368986752913928 -0.105359846004669 0.203552267205198 GCCATTTCCTCCTCCAGGGGATCTTCCCAACCCAGGGATGAACCACGTCTCTTGGGTCTCCTGCATTGGCAGGTGGATTCTTTACCACTGTGCCAGCTGGGGAAACCCCCAAGTCAGATAGGCTGTGATAAAAGCCCAGCAGGTTAGGCTGTGCTTAATTAGTTTCTCCTGAGTTAAGCTTGTTAAGGGCGTGCTCTGGTGTATTGCAAAATGATACCCCTACCCCACACCCCAGTAGAATCTGGAGAGGATTTTCCTCTGATATTCACTGTGAGAACCTAGTCTGAGCTCCTGGAGCTCATGAAAGCACGGAGGTCCCCCATGACTGGGCCCCTCTAGAGTTTTTAATTCTCAGATTTGTCCACACTGAGCCTCCAGCAGTTCACTAACTGCAGTTCGGGTTTTTCTGCCTCAGCACTGCTTCCTGCAGCCGTTTCTGCTCTGTTGTACTGAAATTGAAAAATGATGGAAGAAAGTGGAATAGAGACAACACCACCTGGGACCCCCCCACCGAATTCTGGGGGCCTGGCTTCTGCTGCGCTCTCCTCCTCCCCGGCTCCTTTAGCCGCAGCCAGCACCTTCTCTTCTCCAAGCGCGTCCTCTGTGCAGAGCCTGCCGCCTCAGGTGTACTCCACCCCGCAGCCGTCCCTGCCTCCTGTGCAGCCTGCGGCACCCTTGCCCTTTGTGCCATCTTCACCAGTTCCTTCCGTTCCTCCGCTCGTTACCTCTCTGCCACCTCCTGCTTCTCCACCTACGGCTGCTGCCTTCAGTCATCCTCCTCTATCCCACTTCCCGCCTTCCACCTCTGCCCCAAACACTCTCTTATCTGCACCCCCTTCGGGTCCTCCCACTTCGGGATTCTCTGTTGGCTCAACTTACGACATTACGAGGGGACATGCAGGAAGAGCTCCACAGACACCCCTGATGCCATCGTTTTCTGCACCTCCAGTGACAGGTATTTTGCCAACTCCTATTACTCAGCAAGCCGGTTTGACATCTGTGGCACAGGGAACTGGAACCACATCAGCCATCACTTTCCCAGAGGAGCAGGAAGACCCTAGAATTGGTAGAGGTCAGGATGAAGCTTCAGCTGGTGGACTCTGGGGTTTTATTAAGGGTGTGGCTGGGAACCCTATGGTGAAATCCGTGCTCGATAAAACAAAACATTCAGTAGAAAGCATGATTACAACGCTGGACCCTGGCATGGCTCCGTATATCAAATCTGGAGGTGAACTGGATATTGTAGTGACCTCGAATAAAGAAGTAAAAGTTGCTGCCGTCCGAGACGCCTTCCAGGAGGTCTTCGGCCTCGCTGTGGTTCTAGGGGAAGCCGGGCAGTCCAACATTGCCCCACAGCCAGTGGGCTACGCAGCGGGATTAAAAGGTGCCCAGGAACGGATAGATAGTTTGCGTCGAACTGGAGTGATTCATGAAAAACAGACTGCTGTGTCAGTAGAAAACTTCATAGCAGAATTGCTTCCTGACAAATGGTTTGACATTGGCTGTCTGATAGTTGAAGACCCTGTGCATGGCATTCATCTGGAAGCATTTACACAAGCCACACCAGTACCCTTGGAGTTTGTACAACAGGCTCAAAGTCTGACTCCCCAGGACTACAATCTGAGGTGGTCTGGCCTTTTGGTGACAGTGGGTGAAGTCCTGGAGAAGAGTTTACTCAATGTCAGCCGGACTGATTGGCATATGGCTTTCACTGGCATGTCTCGTCGGCAGATGATCTACAGTGCGGCCAAAGCGATAGCAGGCATGTATAAACAGCGCCTGCCCCCCAGGACCGTGTGAGAAGCCTGGCCCCAGGCTACTGACACTTGCTCACTTGGAGCTACTGGTAGAGAAGAGACAGACCCTTAAGCTGGATAACTTTAGTCAGTCCAACTGTTCTGATCATTTCCTGTAGGCTGCAGTTTTTCTTTTCTAGAAAGGTGTGGTATCATTCCAGTAGATGAAAAGAAACAGGTCCTTTTTATGATTATATAATTTTACGTACCATAGTTCTCAAAAAATGCATAAATATTTTTATAGGACAGTTTGATATATCAGATTTATAAGGTGCAAATTCATGTGCTGAGGTATTTAACTTAATGATATGTACTTGATTATTATTTTGTTTTTTAAGAAATAGTTGACTAAAGAACATGTTTACTGAATATTGTTTAAAGGCATTGTTTCTTTTAATTCATGATTAATATCTTCCCTGCCAGTCTTTGAAGCTTTTCGTGTGTGCATGTGATCATATCTGAGGCTAAGCTGTGGGCTCACCAACAGACTGTAAGACACCTACTTGTAGGGAGATGGTGCACTTTTCTATGCATATTTTTAACATTGGCCAGAATAGCAGAATTGATCATTTTCCTTTTGGTTATCATATTATACACGTATGGTCTGAAAAATCCTTTTTTTTTTTTCCAAGTAAGTTTCAGCATTTCACATTCATACTGTATGATAAACATTGGGATGATATATTTTATTTTTCATTGCTCTGTGACAACTAAGTGGCAAATGATTCCAGTCTATTTAAATTAGAAGCATTAGGTATTTTTGAAATAATACCATTCAGCACTTCTAAGTAAACTCTTGACAGCAGCCATTATTTCTGCTTTAACTTATTTCTCCAGCTGTAATGGATAAATTTTTGAGAGGAAATTGTTGTTTATGAGATTATATGACTTACTTTAAGGATACTTCTTATTTAGTTTGCCTTAAACACTGCTTTTCTAACTTTGTGCCCTTCTGCCTTTACTTTTTATGCAAGTTTTCAAAGAAACAATTTTATAGTGAACCTGGTTTATTCAGCGCATTATGTTTGTATTTAACGAAAGCTTCTTTTTCCCCCCAAATAATATATTTTACCAATTTTGGATTTATACAAATCAAAAATAAATACTTTGTCATATACTTTTGAACTCTATATATGAAAGTTTAAATAACTTTTGAAGATTGTTTCTTATATAAATGTAATTTAATTTTTATTTACTCTTCTATATAATTCTTTAGAGGTAAAAAAAAAAAATAGCACAATCTTATAAAATCTTTTAAGGTGTTGAAGCTATTATCCTGTACTGTCGTTATGTGTCCTGTTTGCTTTGTTTTAATGTCATTTCAAGTACTTATTTGACTTCTATTGTTTTAACCTGAGGGTGATAAGATTACATATTAATTTTCTACCTATGTTATGTGTTAATTCCCATACCCTGTATAATGACCGTTGAGTGCAATTCAGATATCTGTGTCATTAAAAATAATGAGAGAGAGAAGACAGATGTGGTCAGTTGCTATAGCATAATACTTACTTTCCCTTTTTACTGGTATTTATGGAACACTTCATCTGTGTTTTCTCCATCTTCCATGATTAAGGGAAGCCTTTTCTCTAACATTTCTTTTATTTTAAAAAGCTGCCCATTATCATGGTGTGAGACTAACAACACATCACTGTTAGGCATGCAGGAACATATGCCCATACTTCATATTTCTGCTTTTCTCCCTTCTATTATAGGGAGATTTTACAGATCCTAAAAATAATCCAAGTTTTCTTTTGATTTTACCAAATCTCAGATATCTTAATTGATGTTTTTGGGGGATTGTCTTCATAAAATAACTTAACATTGACATCCCATTAGAGGACAGTCTTCAGGTCATCAGATAGCAATGAGAGTTATCCTATGATTTGGGTGCAGCTGATTTTCCTGTAGATGGTAATTTGCACCTTCTGCTCTTTGTGAGTGGGTAAGGACTAGGGAAGGGCAGATGGAAAAGATGAATACATGATCTCATTCTGGCCTCTTATTCCTTTTTTGGCCCAGAGTTACCTTTGAAAGGTTGATGCTCATGACTGATTCCACATAGTCAACATTCCCAGCTTCTTGTTTATTTTTTCATGCTTGGATTTCCTTGTCATATCATGCAAGGTACAAGAAAAGTAATCTCTCACACACCACCGCATCCTGGGCCAGGCAGTCTTTTACTGTTGGTATTGTGGCATGAGATGTGCTGCTCATCAGCCTAAGGCCCCAGCTCCCTTCACCAGTCATCCAGCCGTCCTGTTCTATCCCTGCTTGCTTCCTTATAACTCCCCCCCTAGCATTTTTTAGGGTGAGTTGAGCTGAGACTATTTCTTTTTATTTTACCCTCAAGCATCTTGGGACTACTTATCTTTAACACAGTTCTTTGCCACTACTGTTTTGGTCATGTTTGTGTGTGTGTGTATGTGTTTTTTTGTTTTTTTTTTTCTTTTGAAGTGCTCCCAGAACTACTTACTGAATTTGAAAGTTTGTATACTTTTTAGTTAAGAAGTGTGAAAGAGAATAGGAAAAAATATGCAGGAAGAGTAATTTTACATCAACCTCAATTGACAGAAGGTTACTCAGATTACTCACATTAATAGCATCTTGTTACTAAGTATATCGGGTAACCTAGAGCTGGGCCCCAGATTCTGGGTAGAAAAGATTGAGCCCGTATCAGTAGTTTTCTCCTCTGAGTCTCTTATTATTACTTCCCCTTTCTTTGTGCTTTCTCTCAAAGATTAATGAGGTAGAAAATTGAGATGAATGGATATAGACAAAATGGTAGTATGCTAGTAAATATAAGTAGATAACAGATGAAAGTGTATTATATACATTAATTCAAAATCATGCAAATTACTAATACACTCAGGGCCAGCTAAATTAGTTTAAGATGCTGTTGAAATTTACTTTGTTCCTTGGCTAGAAAAATTTTTAAACAGGAATTTGTGTTCTGTGAAGCCAAACTGGTAACATTCTATGTTCTAAAAGATGTTGGGTTATACATAAATTAAGAAACTTGGATTTTTACTCCCAGAATACGGAGAATAAGCGCTGGGAGTTGGTAATGGACAGGGAAGCCTGGCATGCTGCAGTCAATGGGGTCGCAAAGAGTCGGACATGACTGAGCAACTGAACTGAACTGATGCAGGATGATGTATTGGATAAAGCCAATTTTGTACATATGTAAATATGTCATAAATAAATAATACCTCAATTTATATCCCAAGTGATTTTTCAAATGTTAATCATATTCATATTATATTAGAAAGACCCATTTTCCTTTTTGTCTCAACTTGCTACTGGCTGCCAAGAATTATGGAATAGCAACTTTGCCCATCTTTCAAGTGGAACGGTAACATTCAAATACAGTTGACCCTCGAACAATGAAGGCTTTGGGGAGCTGACCCCTAAACATACAAGTCCATATCAAGTCCACATACAACTTTGAAGTTAGTTCTCCATAGCCATAATTCCACATCAGAGATCAACCAACCACTGATTGTGTAGTACTGTTTTGCATATTTATTGAAAAAACTGTGTATAAGTGGACCTGCAC EMBV3_42625 AGTTACTCCCCTGAGTATCCCTGAGGATGAAATGAGATAGCCTGGAGGTCGCTTGAGAAG Gene BVV0102_347250 + 0 NULL GK000018.2:4703602-4990462 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085306 1 XLOC_051830 NonCoding TCONS_00085306 XLOC_051830 NonCoding NonCoding - 18:4827879-4828781 - TSS63728 804 1 TCONS_00085306_1 76 0.161691542288557 2 0.109877913429523 0.000372294328805122 4.99922386142269e-05 0.0008172071316552 0.000588727410876537 1.22815356059976e-05 2.66944640894171e-05 0.00039530836039874 0.000139775902982259 0.00127576816234433 1.02350953212226e-05 0 0 0.000157025332449409 0 0 0 0 0 8.0271641511374e-05 6.2612001511604e-05 0 0 0 0 0.00109442321598373 0.000219074959568694 7.28749301019191e-06 0 0 0 XM_005201104.1 C1H21orf62 PREDICTED: Bos taurus chromosome 1 open reading frame, human C21orf62 (C1H21orf62), transcript variant X1, mRNA. 1e-17 95.1 78.45 0.134328358208955 0 noncoding 0 0 0 0 -0.274647310380814 0.352626936154418 0.0524132416180993 0.379409670198213 GCCCCTTCCAGCACCGCTAACCCCTCACTCCAGTTCTGTAGGCAGAGACGTCGAGGAGAAGCAGAACTGGGGTTTTGGTCTTAGACACACTAATAGCTACTCCCCTGAGTATCCCTGAGGATGAAATGAGATAGCCTGGAGGTCGCTTGAGAAGGGGAAGTTGCTCTGTTTACATCCATCCTGCACACTAGCGTCGTCAGTCGCTTCCTGCGGACCTGTAGTGCTTGCTGAGCATCTGAGCAGAGAAGGGCTCCCAGGGGCCCGGGGCCAGTTCCCTTTGCTCTCGTCTTGGGCCCCACCTCGGGGTCTCGGGGCCGGCCATGTGCTGCCGCTGGCTCCTGCCCCGTCACAGGAGCAGCCGTGCTTGACTCCTCCCGACCCTGAGCTCACAGGTGTTACGCTGATGGCGTCAACTCAGCCACACCACGTATGTACGTCACGGCAAGTGGACACTGTGGGAATGTTTACACCATTTGTCGATGAGCCAGAGCTCCTCCATCAGGAACCAGTTATTAAGGATTTAACAGCCCGTCTCGTCTCAGGGCTGTCGTTCAGAGAAAAACAACCTGAATTACTGATTAGCCTTGCTCTTCCTATGCGTCCCCAATGCAGGGGGTGCCGGCTCAATCCCTGATCAGGGAGCTAACATCCCACCTGCCTCGTGGCCAAATACCCAGAACATAAGCAATGTTAGAACAAATTCAATAAAGGCTAAAAATGGTCCATATAAAAAATATGGTTTTTAAAAAAGGTATCCACAATCGGGAGGGAAGAGGTAGAACTGTCACCATATGCAGACCATAT TCONS_00085300 TCONS_00085292 TCONS_00085293 TCONS_00085294 TCONS_00085295 TCONS_00085296 TCONS_00085301 s 3' 48223 TCONS_00085300 TCONS_00085292 TCONS_00085293 TCONS_00085294 TCONS_00085295 TCONS_00085296 TCONS_00085301 s 3' 48035 EMBV3_41372 TGTGGAGACGAAAGCTGGGTAGTGGGGAATGGCTCTTAGGTGGGAACTTCGTGTGCATTT Gene GeneID:525734|GPR176:XM_002690784:208_cdna Constitutive 0 NULL GeneID:525734 10 GENE GPR176 NULL G protein-coupled receptor 176 EMBV3_30102 CACCTGCGATGGAACAGGGGCCTCTCCACATGAACCCAGTGTGACTTTGGAAAACAAGAA Gene GeneID:100301205|LOC100301205:XM_002695325:27_cdna Constitutive 0 NULL GeneID:100301205 18 GENE LOC100301205 NULL hypothetical protein LOC100301205 EMBV3_28054 TGTTCACCTCGAAACCAAAAGTTGTGTGTTGCCAAAGCCAAACCCAGGTTCACGGACGTG Gene BVV0102_093418 + 0 NULL GK000012.2:88668941-88876124 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037527 TCONS_00037524 TCONS_00037525 TCONS_00037526 TCONS_00037528 1 XLOC_021410 Coding TCONS_00037524 XLOC_021410 Coding Coding COL4A1 12:88875874-88957190 j TSS27059 5954 1 TCONS_00037524_7 1605 52 0.927418065547562 0.000160685456084374 2.61949025946403e-05 0.00023089393869492 3.11927001259355e-11 0.000116934297696825 5.82458708180816e-05 7.4858495986302e-09 2.4735230011511e-26 0.000163360677918011 2.79114670353395e-05 8.80166861169264e-06 0 3.56086695777663e-05 3.50980648319507e-08 3.79524234334422e-05 0.00411409443733707 0.00124334075674105 0.00234675994908078 5.38497634179352e-07 1.65738309019453e-08 3.71064067353177e-19 0.00224797296893084 0.00136523724815705 0.0015871469935872 0.000243306252229434 6.24204524316796e-08 7.92332203918164e-10 0.00021115787076352 0.000226579736533527 0.000410872038630277 XM_005213978.1 COL4A1 PREDICTED: Bos taurus collagen, type IV, alpha 1 (COL4A1), 0.0 1.025e+04 100.00 0.954316425932146 NM_001845.4 COL4A1 Homo sapiens collagen, type IV, alpha 1 (COL4A1), mRNA. 0.0 5835 82.05 0.994289553241518 TCONS_00037524_7 sp|P02463|CO4A1_MOUSE CO4A1_MOUSE Collagen alpha-1(IV) chain; 0.0 1984 90.02 0.99190031152648 2 coding 0 0 0 0 0.231114056491195 0.332856461078054 0.0286751745286926 0.598776189984464 CAGACGCCTGCTGCTCTGTCTCATCAGCTCTCAGGGTGGGTGTGCCGGCTCTGGCTGCGGGAAATGTGACTGCCATGGCGTGAAGGGACAAAAGGGAGAAAGAGGCCTCCCGGGGTTACAAGGGGTCATCGGGTTTCCCGGAATGCAAGGACCCGAGGGGCCACAGGGACCACCGGGACAGAAGGGTGACACCGGCGAGCCCGGACTGCCAGGCACTAAAGGCACAAGAGGACCCTCAGGAGTGCCTGGTTACCCTGGAAACCCAGGACTTCCTGGTATTCCTGGCCAGGATGGTCCTCCGGGTCCCCCAGGTATTCCAGGATGCAACGGGACAAAGGGTGAGAGAGGGCCTGTGGGGCCTCCCGGTTTGCCTGGATTCGCCGGAAATCCCGGACCACCAGGGTTACCGGGAATGAAGGGAGATCCAGGTGAGATTCTGGGCCATATACCAGGGACCCTGCTGAAAGGCGAAAGAGGATATCCTGGACAGCCAGGAGCGCCCGGCTCACCAGGTCTGCCGGGACTGCAAGGCCCCGTCGGCCCCCCAGGATTCACTGGACCACCAGGCCCTCCAGGCCCTCCTGGCCCTCCAGGTGAAAAGGGGCAGATGGGCTTGAGCTTTCAAGGACCCAAAGGTGAAAAGGGTGATCAAGGGGTCAGCGGGCCCCCAGGATTGCCAGGACAGGCGCAAGTCATCACGAAAGGAGACACGGCCATGCGAGGCGAGAAGGGTCAAAAAGGTGAACCTGGATTTCCGGGGCTGCCAGGGTTTGGAGAGAAAGGAGAACCTGGAAAACCAGGGCCCCGTGGAAAACCAGGAAAAGATGGTGAAAAAGGAGAAAAAGGGAGTCCAGGGTTTCCAGGCGACTCAGGGTACCCAGGACAGCCTGGCCAAGACGGTTTAAAGGGAGAGAAAGGTGAAGCAGGTCCTCCCGGGCTTCCCGGAACTGTTATTGGCACGGGACCGTTGGGAGAGAAAGGAGAGCCCGGGTACCCAGGGGGTCCGGGGGCGAAAGGGGAGACAGGTCCCAAAGGTTTCCCAGGAATACCAGGCCAGCCAGGCCCTCCAGGTTTCCCGACTCCGGGGCTGATTGGTGCCCCCGGCTTCCCTGGCGACAGAGGAGAGAAGGGTGAACCGGGCTTGCCGGGTGTGTCACTGCCAGGACCCAGTGGAAGGGACGGGCTTCCCGGCCCCCCTGGCCCCCCCGGGCCCCCTGGGCAGCCGGGCCACACAAATGGAATCGTGGAATGCCAGCCTGGGCCGCCAGGGGACCAGGGTCCTCCCGGAATTCCAGGGCAGCCGGGGTTGACGGGCGAAGTTGGAGAAAAAGGTCAAAAAGGAGACAGTTGCCTCGTCTGTGACACAGCAGAGCTTCGTGGGCCCCCAGGGCCACAGGGACCCCCCGGAGAAATAGGTTTCCCAGGACAGCCAGGAGCCAAGGGTGACAGAGGCTTGCCCGGCAGGGACGGTCTGGAAGGACTGCCCGGTCCGCAAGGTGCGCCGGGGCTCATGGGCCAGCCGGGAGCCAAGGGCGAGCCCGGTGAGATCTACTTCGACATACGGCTCAAAGGCGACAAAGGAGACCCCGGCTTCCCAGGCCAGCCCGGCATGCCAGGCAGAGCGGGCTCCCCCGGAAGAGACGGCCAACCGGGTCTGCCCGGCCCCAGAGGCTCCCCGGGTTCCGTAGGATTGAAAGGGGAGCGTGGCCCCCCGGGAGGCGTCGGATTCCCCGGGAGCCGTGGCGACATCGGCCCTCCGGGGCCTCCAGGCTTTGGCCCGATTGGCCCCATTGGTGACAAAGGACAGATAGGCTTCCCAGGAACCCCCGGGGCCCCAGGCCAGCCAGGTCCCAAGGGCGAGGCGGGGAAAGTCGTGCCCTTGCCCGGCCCCCCTGGAGCAGAAGGACTTCCCGGGTCCCCCGGCTTCCAGGGGCCACAAGGTGACCGAGGTTTTCCTGGAAGCCCCGGAAGGCCGGGCCTCCCTGGAGAGAAGGGCGCCATCGGCCAGCCTGGGATTGGATTTCCTGGGCCTCCCGGCCCCAAAGGCGTTGATGGTTTACCTGGAGACGCTGGACCTCCTGGGAATCCGGGTCGTCAAGGCTTCAACGGCTTACCTGGCAACCCCGGTCCACCTGGACAGAAGGGCGAGCCTGGAGTTGGTCTGCCGGGACTCAAAGGCCTGCCCGGGATACCTGGCATCCCCGGCACCCCCGGGGAGAAGGGAAACGTCGGAGGACCGGGAATTCCTGGAGAGCACGGCGCCATCGGCCCCCCAGGCCTCCAGGGGCTCAGAGGTGACCCAGGACCACCTGGATTTCAAGGCCCCAAAGGAGCTCCGGGAGTCCCCGGAATCGGCCCCCCTGGAGCAATGGGCCCCCCCGGAGGACAGGGACCCCCAGGGTCATCAGGCCCCCCCGGAGTGAAAGGAGAGAAAGGCTTCCCTGGCTTCCCAGGCCTGGACATGCCAGGCCCCAAAGGAGACAAAGGGTCCCAGGGGCTCCCCGGCCTGACGGGGCAGTCTGGGCTGCCTGGCCTTCCTGGACAGCAGGGCACCCCCGGCCAGCCTGGCATTCCAGGTCCCAAGGGAGAGATGGGAGTCATGGGGACTCCAGGGCAGCCCGGCTCGCCAGGGCCAGCGGGCGTGCCAGGATTGCCAGGTGCCAAAGGGGACCACGGCTTCCCCGGCTCTTCGGGACCCAGGGGAGACCCTGGCTTCAAGGGCGACAAAGGCGACGTGGGGCTCCCCGGCAAGCCGGGCTCCATGGACAAGGTGGACATGGGCAGCATGAAGGGCGAGAAGGGAGACCAAGGCGAGAAAGGACAAACTGGTCCGACTGGTGATAAAGGATCCCGGGGAGACCCGGGAACCCCAGGTGTGCCAGGAAAGGATGGTCAGGCAGGACACCCCGGGCAGCCAGGACCTAAAGGTGATCCAGGTGTGAGCGGGATCCCAGGTGCTCCGGGACTTCCTGGTCCCAAAGGATCCGCTGGTGGAATGGGCCTACCAGGAATGCCAGGACCAAAAGGTGTGGCTGGCATCCCCGGCCCGCAGGGCATTCCTGGCTTACCTGGAGACAAGGGGGCAAAAGGAGAGAAAGGGCAGGCGGGGCTGCCTGGCATTGGGATTCCAGGACGGCCCGGGGACAAGGGAGACCAGGGCTTAGCAGGATTTCCCGGAAGCCCCGGCGAGAAGGGAGAGAAAGGAAGCACTGGGATCCCAGGGATGCCCGGGTCCCCGGGCCCCAAAGGCTCCCCAGGAAGTGTTGGCTATCCGGGAAGCCCTGGGTTGCCTGGAGAGAAAGGTGACAAAGGCCTCCCGGGACTGGATGGCATTCCTGGCATCAAAGGAGAAGCAGGTCTTCCTGGGAAGCCTGGCCCCACGGGTCCAGCCGGCCAGAAAGGGGAGCCCGGCAGCGATGGAATCCCAGGGTCGGTGGGAGAGAAGGGCGAGTCAGGTCTACCTGGAAGAGGATTCCCAGGGTTTCCAGGGAGCAAAGGAGACAAAGGTTCAAAGGGCGATGTGGGCTTCCCAGGATTATCCGGGAGCCCAGGAATTCCTGGATCCAAAGGAGAACAAGGATTCATGGGTCCCCCGGGACCACAGGGACAGCCGGGATTGCCAGGGACCCCAGGCCACGCGGTAGAGGGGCCCAAAGGAGACCGCGGCCCGCAAGGACAACCCGGCCTGCCAGGGCGTCCGGGGCCCATGGGGCCTCCAGGCCTCCCCGGGCTCGAGGGGCTGAAAGGTGAAAGGGGGAACCCAGGCTGGCCGGGCACTCCGGGAGCTCCAGGGCCCAAGGGAGACCCAGGATTCCAGGGCATGCCGGGCATCGGCGGCTCTCCAGGGATCACAGGAGCCAAGGGTGATGTGGGACCTCCAGGAGTTCCAGGGTTTCATGGTCAGAAAGGCGCCCCCGGCCTGCAGGGAGTCAAAGGTGACCAAGGAGATCAAGGCTTCCCAGGAACTAAAGGTCTTCCCGGCCCCCCGGGCCCCCCAGGTCCGTTCAGCATCATCAAGGGGGAACCAGGGCTCCCTGGGCCCGAGGGCCCCGCGGGTCTGAAAGGGCTTCAGGGACCTCCAGGCCCGAAAGGACAGCAAGGTGTGACGGGATCCGTGGGCTTGCCCGGGCCCCCAGGTGAGCCCGGCTTTGACGGCGCCCCAGGCCAGAAAGGAGAGACGGGGCCCTTCGGCCCTCCCGGTCCACGTGGCTTCCCAGGTCCGCCCGGCCCCGACGGGCTGCCGGGATCCATGGGTCCCCCGGGCACCCCATCAGTCGATCACGGCTTCCTTGTGACCCGGCACAGTCAGACAACAGACGACCCCCAGTGCCCTCCTGGGACCAAAATCCTCTACCACGGCTACTCTTTGCTCTACGTGCAAGGCAACGAGCGGGCGCACGGCCAGGACTTGGGCACGGCGGGCAGCTGTCTGCGGAAGTTCAGTACCATGCCCTTCCTCTTCTGTAACATCAACAATGTCTGCAACTTCGCGTCCCGCAACGACTACTCCTACTGGCTGTCCACCCCGGAGCCCATGCCCATGTCCATGGCTCCCATCACGGGGGAGAACATCCGGCCCTTCATCAGCAGGTGTGCTGTGTGTGAGGCTCCGGCCATGGTGATGGCCGTGCACAGCCAGACCATCCAGATCCCGCAGTGCCCCACCGGCTGGTCCTCGCTCTGGATCGGCTACTCCTTTGTGATGCACACCAGCGCCGGGGCTGAAGGCTCTGGCCAAGCCCTCGCCTCCCCCGGCTCGTGTCTGGAGGAGTTCAGAAGCGCCCCCTTCATCGAGTGCCACGGCCGCGGAACTTGCAATTACTACGCGAACGCTTACAGCTTTTGGCTTGCCACGATAGAGCGGAGCGAGATGTTCAAGAAGCCCACGCCGTCCACGCTGAAGGCCGGGGAGCTGCGCACGCACGTCAGCCGGTGCCAGGTGTGCATGCGGAGGACATAACGGAGCCGGCCCGCAGCTGCGTCACGAATGGTGCTACTCCCTCTTCCCCCTCCTCCTCCTCCTAACAGCAACGAGCTCTAGAAACATAGCCCGTGTACCTCACTGTCCATACGAAAACCATAAGGTGCCTGATAGGAACCTGCCAGACTAACACACCCTGCTTCGTTGGCCTCTGCTGCTGAAGGAGAACCAAGTCCACGCCGAGCTGCCTGTAGAGAAGCCCCCGGGCGCTCCCGATGCAATAAAGAGCATGTCTGTCCTGAGTCCGCTGCACTCCTGTGTGACGTGAGACCCACCAGAAAACCAAAGGGTGCTAGAAGGGGGGCGGCCTTCCATCCTGGGGGCAGCCCCTTGGCGTCCCGGCGTCCTGACAGATCCGTTCCACCCCCAGATGGATGGTCTGTTGAGGTCACTGTCGAGCTGTCTCAGAATTCAGGTTCCCTCGGTCTGTCCAAGTACTGGCCGCGTGGAGCCGATGGCCGGGCCCTCCCGGTGGAAGGATGGGCCGGCAGCCCTGTCTTCCGACAGCCCCCTCCCTCCAAAGAAAAATGTCAGTCTTTCTGCTCCGTGTGGTACTATGCAGCTGCTCTTGCAGAAATCACGGATTTCCTGTGGAATAAAGGTGGTCCCCAAAGTAGGCAGAAAGGAAATATATATATATTTTAGTAATTTATATAGATGTCAGCAATTAGGCAGGTCAAGCTGTAGTTTCATTTCCACTGTTAAAATAAAGCTTACATAGTTTCTTTAAAAGCCTGTGTTGTCCTTTAACAGAGGTTTTTTAAACACTAGGGTGTCGAATGTGAAACACCAGTTTTCATTGTTCACCTCGAAACCAAAAGTTGTGTGTTGCCAAAGCCAACCCCAGGTTCACGGACGTGGTGTCTGTTCCAGGGAGACGTGTCCTTTGAGTTTCTTGTTTTCTTCTGTATGAGATATCTTCAGGGTTTTAAACACTAATCACAAACTGAATGACTTGACTTCAAAAGCAACN EMBV3_36052 GCCGTAATAGAGCCATGTAGGGAATGCACTGATTGCATGTTAATTGTGGCAGGAATATCC Gene GeneID:513451|SFRS11:NM_001075621:34_cdna Constitutive 0 NULL GeneID:513451 3 GENE SFRS11 MGC139252 splicing factor, arginine/serine-rich 11 EMBV3_39774 CTCTAATGCTGAGCTAAGCCGAGCCTCTGTAGGAGTGGCCTTCTCCTCCTGCATGCTTTT Gene GeneID:784866|LOC784866:XM_002690130:169_cdna Constitutive 0 NULL GeneID:784866 9 GENE LOC784866 NULL hypothetical LOC784866 EMBV3_42140 ACCCTCCAAACTCAGCGTGTGTGTCAGGGGAGCTTTAAACTATGGACTCCGGAAGATACA Gene GeneID:100140997|LOC100140997:XM_002697731:3_cdna Constitutive 0 NULL GeneID:100140997 24 GENE LOC100140997 NULL hypothetical protein LOC100140997 EMBV3_23619 AGGCATCTGTACACACCATGATGGAGTCTCTATAGTGTGACTAACCCACAGGCAGGTTGG Gene GeneID:654400|LOC654400:XM_002697727:58_cdna Constitutive 0 NULL GeneID:654400 24 GENE LOC654400 NULL GATA-6 EMBV3_35184 CACCATGATTAAAAAATCGCCTGCACATTCACTCTGAGATGGAATAATTGGGAATCTCAA Gene BVV0102_294661 + 0 NULL GK000030.2:132527492-132583990 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10679 TTTGCTTCCCATGATTCTACTGTCGGTGATCTATGCCCAGTCAGGAGCCTGCCTATATCC Variant GeneID:506859|ZNF317:XM_002688768:90_cdna 171^290 3 EMBV3_32858 GeneID:506859 7 GENE ZNF317 NULL zinc finger protein 317 EMBV3_01739 CAGACTGTCATGGCCAGTGTCTACCTTTTCTTCCCACCTGTGGCCAACCGCATTGTTTAT Gene GeneID:788649|LOC788649:XM_002707696:72_cdna Constitutive 0 NULL GeneID:788649 15 GENE LOC788649 NULL similar to odorant receptor HOR3beta3 EMBV3_34862 GTGGGCATGGCTCCCCTCTCTGTTGGCTCCCTGGACCCTTCCATCACACTGGGACAGTAC Variant GeneID:281551|TSFM:NM_174204:905_cdna 867^923 1 EMBV3_39314 GeneID:281551 5 GENE TSFM NULL Ts translation elongation factor, mitochondrial EMBV3_15671 GAGTGGACATCGTTACCGTTTGTACCTTGATGAATTAGAGGGAAGTAGTAATCCTGGTGC Gene GeneID:541186|GOPC:XM_002690092:70_cdna UTR3_Alt 2 NULL GeneID:541186 9 GENE GOPC NULL golgi associated PDZ and coiled-coil motif containing EMBV3_35424 CCCTCTGGTTCCTGGGATGTAATTAGTGTGATCAGTACTTTTTTGGGTAGCTGGGGCAGG Gene BVT0102_032260 + 0 NULL GK000015.2:65132949-65145070 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20144 GTTGTAGTTTCAAAGTCTTTCTGGAGCAGGGAGATGAGGGGGAAGGGTTGTCATTTCTCC Gene GeneID:504819|NEXN:XR_084681:170_cdna Constitutive 0 NULL GeneID:504819 3 PSEUDO NEXN NULL similar to Nexilin (F-actin binding protein) (Nelin) EMBV3_37872 GGGGAAGTTCGTGTCCTGTCTTCTGTGCGTTCCCCAGCCCCAATCTTCAAAGCAATTGAA Gene BVV0102_058352 + 0 NULL GK000018.2:55721416-55722334 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10424 TCAAGTAAAATGTAAAGAACCTGTGCAGAGCAGAAGAAAACAAATACCAAGATGCCTTTC Gene GeneID:617430|C2H11orf70:NM_001046598:26_cdna Constitutive 3 NULL GeneID:617430 15 GENE C2H11orf70 C11orf70 MGC127886 chromosome 11 open reading frame 70 ortholog EMBV3_06002 CCTGTGACCGGATTACCTATCTTGCATGGGTGTTTGAATGCGCTGTCTTAACTTTAGGGG Gene BVV0102_228735 + 0 NULL GK000023.2:12940628-12964405 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132413 TCONS_00132412 1 XLOC_080771 Coding TCONS_00132412 XLOC_080771 Coding Coding GLP1R 23:12908470-12943917 = TSS99074 4682 1 TCONS_00132412_3 463 0.0207176420333191 13 0.868278508153247 5.47890234172912e-08 2.99781557329287e-05 1.09755006236511e-08 9.97464732440152e-09 5.90801088244956e-09 8.1149448552595e-08 0 7.04138526461222e-09 9.2233255522101e-09 5.05416533464941e-09 2.77984134627054e-09 0 3.37628699254927e-09 0 3.05721497681295e-06 0.000555171572906128 0.00044371596715406 2.19575297288335e-06 8.20539224829344e-12 8.50712061983825e-09 3.35665576425892e-09 3.28539561706798e-07 0.000165081177999909 1.87826891905774e-05 8.33898620663946e-09 8.61391623033078e-09 3.07981979451774e-05 1.15026904901015e-08 3.72841876105593e-05 1.26972127931961e-22 XM_595589.5 GLP1R PREDICTED: Bos taurus glucagon-like peptide 1 receptor (GLP1R), 0.0 5974 99.20 0.713583938487826 NM_002062.3 GLP1R Homo sapiens glucagon-like peptide 1 receptor (GLP1R), mRNA. 0.0 2324 77.29 0.634985049124306 TCONS_00132412_3 sp|O35659|GLP1R_MOUSE GLP1R_MOUSE Glucagon-like peptide 1 receptor; 0.0 840 90.74 0.954643628509719 2 coding 0 0 0 0 -0.181661516550179 0.435748410264827 -0.0334285688374405 0.698082308278578 ATGGCTGAGCTCTGGAAGTCAGGCAGAGAAGATGAGGCCGGGTCCTGCCTTGGGGAAGACGCAGGGCTGCGCCAGCTGGGTGCCACCGTGTCCCTCTCGGAGACCGTGCAGAAATGGCGAGAGTACCGACGCCAATGCCAGCGCTTCCTGACCGAGGCCCCGCCCCCGGCCGCAGACCTCTTCTGCAACCGGACCTTTGACGACTATGCCTGCTGGCCGGATGGGTCACCAGGCTCCTTTGTGAATGTCAGCTGCCCCTGGTACCTACCCTGGGCCAGCAGCGTGCTGCAGGGTCATGTCTACCGGTTCTGCACCGCGGACGGCCTGTGGCTGCATAAAGACAACTCAAGCCTGCCCTGGAGGGACCTGTCCGAGTGTGAGGATTCCAAGCGAGGGGACCGCAGCTCCCCGGAGCAGCAGCTCCTGTCTCTTTATGTCATCTACACGGTGGGCTACGCGCTCTCCTTCTCTGCGCTGGTCATCGCCTCGGCCATCCTCCTGGGCTTCAGACACCTGCACTGTACCCGGAACTACATCCATCTGAACCTCTTTGCATCCTTCATCCTCCGAGCACTGTCCGTCTTCATCAAGGACACGGTCCTCAAGTGGATGTACAGCACAGCCGCCCAGCAGCATCAGTGGGACGGGCTCCTCTCCTACCAGGAGTCTCTGGGCTGTCGCCTGGTGTTCCTGCTCATGCAGTACTGCGTGGCAGCCAACTACTACTGGCTCCTGGTGGAGGGGGTGTACCTGTACTCGCTGCTGGCCCTGTCCGTCTTCTCCGAGCAGCGTGTCTTCAGGCTCTACCTGAGCATTGGCTGGGGAGTCCCCCTGCTGTTTGTCATCCCCTGGGGCATCGTCAAGTACCTCTATGAGGACGAGGGCTGTTGGACCAGGAACTCCAACATGAATTACTGGCTCATAATCCGGCTGCCCATCCTCTTCGCCATCGGGGTGAACTTCCTCATCTTCGTCCGGGTCATCTGCATTGTGGTGTCCAAACTGCAGGCCAACCTCATGTGCAAGACAGACATCAAGTGCAGGCTCGCCAAGTCCACGCTGACACTCATCCCCCTGCTGGGGACGCATGAGGTCATCTTCGCCTTCGTGATGGACGAGCACGCCCGGGGAGTGCTGCGCTTCGTCAAGCTGTTCACGGAGCTCTCCTTCACCTCCTTCCAGGGGCTGATGGTGGCCATCCTGTACTGCTTTGTCAACAACGAGGTCCAGATGGAGTTCCGGAAGAGCTGGGAGCGCTGGCAGCTGGAGCACCTGCACGTCCAGAGGGAGAACAGCATGAAGCCCTTCAAGTGTCCCACCAGCAGCCTGAGCTGCGGGGCCACAGCAGGCAGCAGCGTGTACGCAGCCTCCTGCCAGACCTCCTGCAGCTGAGACTCAGGCGCCTCCCTCCCTGTGGTCTCACTGCCGGCCTGGGCGGCCACCCCAGGTGGGAGAGACTCTCCCAGGGACTGGGGGGCAGGGGGCTGGGGGAGCACCAGAGGCACACACACTACTTCCCTGCGTTCCTGTCCCGAGCCCATCAGACAGGCAAATGGGCAGTGCCTCCTGGGACCTGAGGACACATTTTATTCCGAGGAGAAGCAACCTGTTAATTTGATCACTGTGGCGGGTGGAGAGGAAAAAGCAATTGCTGCTAAAACAAGGAGGATTTCTTCTCGTTAAGCCACAAGGCCCCTGGGGTTCCCCCAGAGAAGAACATCAGCCCCAGACTCAAACTCAAGGTCAATGGCTTATTAGTGGCCTTGTAAGAGAACATGGTTCTGCAAGAGGCGGATATGACCTCAGCTAAACACGGAGCTCGGGTAACGCCAGCCGACTCCACCTGCCTCCGGTTGGCATCACCACCCCCGCCTGCCTCCTCTTTAAGGGACGCTGGGCACAGGCTTGTTGCCCCTCCTCTGGCCCCTCGTCTCACTGCCCACCCTCCAGTAGCGATTTCTAGAAGTGGTCATGGGGGTGGTGTTGAGAATGAACATCGAGAAGGTGCCTCACAGTTTCCCCTTTCTGGCTCCCACTTCTTCCTTGGGTGTTTGAGTTGCTTTGGCGCCTGCTCCCAGGGCAGGTTCACTGTGGAGGAGTCCAGCCCTGGGTGTGAGCTCTGACTCATATTCTAGAGATGCTCAAGAATCCTGTGGGGCTCATCTAGGGGACTTTAGGAATGTCCCTGATGGGACTGTAGATTACTCTCTACTGTTGGGAACCCACAGGCGCCGAGACAGAGAGACAGACAGCCTGCCCCTCTCCATGGAAATACTTTTTACCTGTGACCGGATTACCTATCTTGCATGGGTGTTTGAATGCGCTGTCTTAACTTTAGGGGGTGTGACCAAAAAGAGACTCTTCCAGGAATTCTACCAGTCCCCACTATGACCATGGGGGTGGGCTTCCCATCCCTTTGGTTACTTCCCTGTGAAATTCCCCCAACGTGGGAGCATGTATATACTTTGCTCATTTCTCTGTCTTTGCTGTGAATAGTTTCTGTCTGCACAAACATGAAATTCTGAATTTTCCCAACTGGTAGAAACAAGCAGTAAACCACAGTGATGGTTTTGGTGTTGTTTGGGGTTGTACTGTAGTTATTAATTTGACTCATCCATGCTTTGAGGTACTTAATGTTCACCCTGCCTCCAATCTCATCCCATAAATAATGAGCCTCAGGGAAGCTTAGGCAAAACCTTTCAATCTAGCCACGGAGGAAAAGCAGACATGTAGCACCACTGCAGAGACCCAGACAGAAGGGGAACAGCCATGCCACAGAGGCTGGCAACTGAGTTCATAGGTATAGAACACAGAGCAGGAGAGAACCCTTGGGAGTTCACATCTTCTGGGAGGGCAGAGGGAGAGTCTTTGGATGAATTCCTAAGGGAATTGATCTCTCCCTCCTATTTTTGAGTGGCAGGAACCCTCCCGCAGAGCCTTGTGCCAGACACACTCTCCTCTGCCCCTCCGAGAGGCACAGGATGTGCAGGGAAAATAATAATGGGACATAAAACACATCAAGCAGAAAACCTCTTATACTTCAGCTTCAGTGGAGTGTTGTGTCTATGTTAATAGGGAAGTTGAACCTCAGGCTAAAGAAAGGATTTGTGCAGGCTGCCTCTTTGAGAAAATGTGGAGAGCCGGGGGTGGGGACATGCCTGCCTCCCCAGTCAGGAGGGCAGACAGCCCCATCGGCATTGGTTTGCTCTTTGGAGGGGGGCTAGGGTGAGGAGAGCACTGGTGGGTTTGATTGGGTGGGGTCCAGCTCTGGTGCAAGTATTTCCATTTTGGGTAAACTGGAAGATTTTTGAGAATCATTAATAAACTGTACAACAACGAAGAGACAAATTAATATTATTTTCAAGAAATAAATTTTTGAGGGGAAAGATTGTAGGGAGAAAGTGTTTAGTTAGGCACTTGGGAAGGAAGCTCAGACAATTTGGTTTTATGCTCTAAGTTCTTTTCCCAACGGGTACTGATTCCTAGTTGCAGAGTGCTCATCACACCCCAATTGCCCCAAGCCTTTTAACACCAAGCAGTGTTTTCCTTGTCAGATACATACCAGATGCTGAACTGAAGAAATATTTTCTTTGCTCTAAGACCCGCACTATTAATATTCATTTGAGTGGCAGTGCACTCTCTCCAAAGCTATTCCCAAGCTAAATATAGCTCTCTAACAGATCTGGGAACGATTGAATGCAGTGTGCTCAGAAATTCCTCTGGCTGTTTACATGCCTGGTGCCCAAAGTCTGGAGCTTGCTGAGAAAACTCTTGCTTGCCTCTGTCCTGGGGCAGGGTAAGGTGCTGTGTGTGTGAGCAGTGTAGCCAGGTCTGACTGTCATGAATAGAAGCTGAGTTCAGCACTCTGGCCAGCTCCCCACTGACCTTGTGAGGGGCTTAAACCATGTCAATTTATCTTTTTCATCTGAATCTTTGGAGCAGCTAAACCACAGAACTGAGACAAACCACTTACATTGCAAGGTTGCCTTCCCTTTAGAGCAGCTTTCCTGATTTGCAGGCATGATTTGCAGTCGCCTCAAGGCACTTTTATGCTGGAGAGTACAGCAGTGGAGTTCTCAGAGACTCAGCAGGGAAAGCTCCCGGACATCTCACTGCTCTGATCTGGAGAATTGAGGAGGGAAGCTTACAGAGGTGATCTGCCCAAGGTCACAGGGCTAGATGGTGGCTGAACTGGGAGAGGACCCAGGCCAACTTCTGCCTTCCAGTCCAATGAAGCCTCTGGAAAGGATAGATGAAAAATAGAAATGGCCATTCAGGACACTCTCGGTGAAAGCTGGCAGTGTTGTGTGGAGTTTCTGTTAAAGAGAAAACACAGCAGCAAAAGAGACAAGTCGGTTGGCTCAGGTGCCGTTTCAGTGATTTATGCCCCTGAGAAGAGGGGAGGGTGTGCTTTGCTGTCATTCCACGTACCGCATTCATCCTTGTCTTCAAATTAAGAAATGAAATGCATTAGAGCTCAAGTGTACACAGAAGCAGCAAGGAGCCATTCCAGAGAGCAAATCCAGCACTCTTTTAATGGGTTAGCTTAGTGTTTTCCCGATGCACCTGTGCTCATTTGAGAAGTTGTGTGTTCTGATAGCCCTGCAGAGTGGACTAAAAGAACCTAAAGAAGGACCTAACAACCTGACCCTCAGCATTGCCTCTCTAGTACTCCCTGAAGT EMBV3_40361 TCAACTTACTGGAAGAAATGAAGAATTAAGACAGGAGCTCAGAGAATCTCGGAAAGAGGC Gene BVT0102_048484 + 0 NULL GK000005.2:17961464-18010353 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194029 TCONS_00194023 TCONS_00194020 TCONS_00194021 TCONS_00194026 TCONS_00194022 TCONS_00194025 TCONS_00194031 TCONS_00194024 TCONS_00194030 1 XLOC_117653 Coding TCONS_00194024 XLOC_117653 Coding Coding CEP290 5:17900648-17998527 j TSS144880 9989 1 TCONS_00194024_8 2473 0.0187205926519171 53 0.898485870164899 0.000458184396386833 0.000522778447812743 0.000269652878086991 0.000138577271505237 0.000230226430271402 1.08557592899368e-15 0.000195266089205627 0.00010558113852146 0.000253525958220693 2.99416463397863e-124 9.38939316907212e-13 2.16778974475258e-62 4.67570699480085e-05 9.36981467061468e-05 7.38712153271086e-13 1.79534981123791e-11 1.20102080803586e-15 5.44656539712886e-24 0.000133939289632651 0.000366448603662677 3.01524347517265e-38 6.35520838751211e-34 1.43237512158366e-05 3.65503514285991e-05 0.000304349987696986 0.000530177352683141 0.000382717577948695 2.12020539873418e-09 3.88343382251125e-29 4.6212367762345e-18 XM_005206047.1 CEP290 PREDICTED: Bos taurus centrosomal protein 290kDa (CEP290), 0.0 1.481e+04 100.00 0.821703874261688 NM_025114.3 CEP290 Homo sapiens centrosomal protein 290kDa (CEP290), mRNA. 0.0 1.066e+04 90.13 0.783561918109921 TCONS_00194024_8 sp|O15078|CE290_HUMAN CE290_HUMAN Centrosomal protein of 290 kDa; 0.0 4317 89.56 0.999595632834614 0 coding 0 0 1 0 0.00742960662392796 0.960181294452589 -0.0161341850368977 0.73816316580581 ATCGCTAGCATCCGGGCTCTTGTTGCGGCCTCGGCGGGGTGGGGAATGGTGTCGCCTAGCAGCCGCCGTCGCTATTACTCGCTCCGGACCAGTTGGCTGGATCCAGTGTCCGATAGGAACGGCGCTGGAGAGCGGTCAGGTTTGGCAGCTGGGCCGGGCCGAGTGGGTATGGTAGCTGAACGGCCGCCGCTGGTTGCCAGGTTTGGTGTAGAAGGTAAAGCACAGTGAAAGAATTCAAGATGCCGCCTAATATAAACTGGAAAGAAATAAGAAAGGTTGACCCAGATGAGCTGCCTCGTCAAGAAGAATTGGCAGATAATTTATTAATTTCCTTATCCAAGGTGGAAGTAAATGAGCTAAAAAGTGAAAGTCAAGAAAATATGATACACCTTTTTAGAATTACTCAATCACTAATGAAGATGAAAGCTCAAGAAGTAGAGCTAGCTTTGGAAGAAGTAGAAAAAGCTGGAGAAGAACAAGCAAAATTTGAAAATCAATTAAAAACTAAAGTAATGAAACTGGAAAATGAACTAGAGATGGCACAGCACTCTGCAGGTGGACGTGACACTCGGTTTTTACGTGATGAAATTCGCCAACTTGAAAAGCAATTGGAACAAAAAGATAGAGAATTGGAGGACATGGAAAAAGAGTTGGAGAAAGAAAAGAAAGTTAATGAACAATTGGCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGCAAATTAAGGAGAGAGAATGAACAGCTTCGTCAGGATATTATTGACTATCAAAAACAAATAGATTCGCAAAAAGAAACACTTTTATCAAGAAGAGGAGAAGACAGTGACTACCGATCACAATTGTCTAAAAAAAACTATGAACTTGTCCAATATCTGGATGAAATTCAGACTTTAACAGAAGCTAATGAGAAAATTGAACTTCAGAATCAAGAAATGAGAAAAAATTTAGAGGAGTCTGTCCAGGAAATGGAGAAGATGACTGATGAATATAATAGGATGAAAGCTGTTGTGCATCAGACAGATAGTATGATGGACCAGTTAAAAAAAGAAAATGATCATTACCGGCTTCAAGTGCAGGAGCTTACAGATCTTCTGAAAGCAAAAAATGAAGAAGATGATCCAATCATGGCAGCTGTCAATGCAAAAGTAGAAGAGTGGAAGTTAATTTTGTCTTCTAAAGATGATGAAATTATTGAGTATCAGCAAATGTTACATAGTCTGCGGGACAAACTGAAAAATGCCCAGCTTGATGCTGATAAAAGTAATGTTATGGCTCTACAACAGGGTATACAAGAGCGAGATAGTCAAATTAAAATGCTCACTGAACAAGTTGAACAATATACAAAAGAAATGGAAAAAAATACGTTTATAATCGAAGATCTGAAAAATGAGCTCCAAAGAAATAAAGGAGCTTCAACACTTACGCAGCGGACTCATTATATGAAAATTCAGTCTAAGGTTCAAATTTTAGAAGAGAGAACTAAAGAGGCTGAGAGAACAGCTGAACTGGCTGAGGCTGATGCTAGGGAAAAGGATAAAGAACTGGTTGAGACTTTGAAGCGATTAAAAGATTATGAATCCGGAGTTTATGGTTTAGAAGATGCTGTTATTGAAATAAAGAATTGTAAAAACCAAATTAAAATAAGAGATCGAGAGATTGAAGTATTGACAAAGGAAATCAATAAGCTTGAGTTGAAGATCAATGATTTTCTTGATGAAAATGAGGCACTTAGAGAGCGCATGGGCCTTGAACCAACAACAATGATTGATTTAACTGAATTTAGAAATACCAAAAGTTTAAAACAGCAGCAATACAGAGCTGAAAACCAGATTCTTTTGAAAGAGATTGAAAGTCTAGAGGAAGAACGACTTGATCTGAAGAAAAAAATTCGTCAAATGGCTCAAGAAAAAGGAAAAAGAACTGTCACTTCAGGATTAATTGCTGAGGACCTGAACCTAACTGAACACTTTTCTCAAGAGAATAGAATGGGAGAAAGAAAATCTGATTTCATGAGCCTCAAAAATATGAGTGAAGAACAGTCAAAGAATGAATTTCTTTCAAGAGAACTAATTGAAAAGGAAAGAGATTTAGAAAGAAGTAGAACAGTAATAGCGAAATTTCAAAATAAATTAAAAGAATTAGTTGAAGAAAATAAGCAACTTGAAGAAGGTATGAAAGAAATATTGCAAGCTATTAAGGAAATACAGAAAGATCCTGATATTAAAGGAGGGGAAACATTTCTAATTATTCCCAGTCTTGAAAGACTAGTTAATGCTATAGAATCAAAGAATGCAGAAGGAATATTTGATGCTAATCTGCATTTAAAAGCCCAAGTTGATCAACTTACTGGAAGAAATGAAGAATTAAGACAGGAGCTCAGAGAATCTCGGAAAGAGGCTATAAATTATTCTCAGCAGTTGACAAAAGCACATTTAAAGATAGATCATCTTGAAAAAGAAACCAGTCTTTTACGACAAACAGAAGGATCAAATGTTGTGTTTAAAGGAATAGACTTACCTGATGGGATAGCACCATCTAGTGCCAATATTATTAATGCTCAGAATGAATATTTAATACATATCTTACAGGAACTAGAATATAAAGAAAATAAGTTAAAGAATTTAGAAGATTCTCTTGAAGACTATAACAGAAAATTTGCAGTAATTCGTCATCAACAAAGCTTATTATATAAAGAATACCTAAGTGAAAAGGAGAACTGGAAAACAGAATCTGAAACAATGAAAGAGGAAAAGAAAAGACTTGAGGATCAAATCCAACAAGATGCTATAAAAGTAAAAGAATATAATAATTTGCTCAGTGCTCTTCAGATGGATTCAGATGAAATGAAAAAAACACTTGCAGAAAATAGTAGAAAGATCACAGTCTTACAGGTGAATGAAAAGTCACTCATCAGGCAATATACAACTTTGGTAGAAATGGAGAGACAGCTTAGAAAAGAAAATGGGAAACAGAAGAATGAATTGATGGCAATGGAGGCTGAAGTTGGTGAAAAAATTGGACGTTTGCAGCGTTTTAAGGAAATGGCCGTTTTCAAGATTGCAGCACTACAAAAAGTTGTAGATAATAGTGTCTCTCTGTCGGAACTAGAATTGGCCAATAGACAATACAATGAACTGACTGCTAAGTACAGAGATATCTTGCAAAAAGATAATATGCTTGTTCAAAGAACAAATAACTTGGAACACCTAGAGTGTGAAAATGTATCCCTAAAAGAACAAATGGAGTCTATCAGTAAAGAACTGGAGATTACCAAAGAAAAGCTTCACACTATTGAACAAGCCTGGGAACAAGAAACTAAATTAGGAAATGAATCTAACATGGATAAGGCAAAGAAATCTGTAACCAACAGTGAGATTGTTTCTATTTCAAAAAAAATCACTATGCTGGAGATGAAGGAATTAAATGAAAGGCAGAGGGCTGAACATTCTCAAAAAATGTACGAACATGTGAAGACTTCACTACAGCAAGTGGAGGAACGCAATTTTGAATTGGAAACCAAATTTGCTGAGCTTACCAGAATCAATTTGGAGGCACAGAAAGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAAGACAGTAAGCGATGCTGACAGGCAACACATTCTAGAATTAGAGAAGAGTGAAATGGAACTAAAAGTTGAAGTATCAAAACTAAAAGAGATTTCTGATATTGCCAAAAGGCAAGTTGAAATTTTGAATGCACAACAACAGTCCAGGGAGAAGGAAGTAGAGTCCCTCAGAACACAGCTGTTAGACTATCAGGCACAGTCTGATGAAAAGGCACTGATTGCCAAGCTGCACCAACACGTAGTCTCCCTTCAGGCTAGTGAGGCTGCTGCTCTTGGCAAGGTGGAGTCAGTTGCATCTAAACTGCAGAAGGTGGAGGCCCATACTCTGCGCTTAGAGCAGAAACTCGATGAAAAAGAACAAGCTCTCTTTTATGCCCGTTTGGAGGGTAGAAACAGAGCAAAACATCTGCGCCAAACAATTCAGTCTCTACGACGACAGTTTAGTGGAGCTTTACCTTTGGCACAACAGGAAAAGTTCTCTAAAACAATGATTCAGTTACAAAATGACAAACTTAAGATAATGGAAGAAATGAAAAATTCTCAACAAGAACATAGAAGTCTGAAGAACAAAACACTGGAGATGGAATTAAAGTTAAAGGGACTGGAAGATTTAATAAGCACTTTAAAGGATGCCAGGGGAGCCCAAAAGGTAATCAGTTGGCACACAAAAATAGAAGAACTCCGTCTTCAAGAGCTTAAACTCAATCGAGAATTAGTCAAGGATAAAGAAGAAATAAAATATTTGAATAATATAATTTCTGAATATGAGAACACAATCAGTAGTCTGGAGGAAGAAATTGTGCAGCAGAATAAGTTTCATGAAGAAAGACAAATGGCCTGGGATCAGAGAGAAGTTGAGCTGGAACGTCAACTAGATATTTTTGACCGTCAGCAAAGTGAAATACTACGTGAAGCACAAAAGTTTGAAGAGGCTACAGGATCAATGCCAGACCCTAGTTTGCCCATTCCGAATCAACTTGAGATTGCTCTAAGAAAAATTAAGGAAAATATCAGAATAATTCTAGAAACCCAAGCAACTTGCAGATCACTGGAAGAGAAACTAAGAGAAAAAGAATCTGCTTTACGGTTAGCAGAGGAGAATATTCTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGCCACTGCAGAACAAGAAAAGCTTCTAGCTGAGTTCAGCAGAAAAGAGGTGGAACCAAAATCTCATCACACGTTGAAACTTGCTCATCAGACCATTGCAAATATGCAAGCAAGGTTAAATCAAAAGGAAGAAGTGTTGAAGAAGTATCAACATCTGCTAGAAAAAGCCAGAGAGGAACAAAGAGAAATTGTTAAGAAACATGAAGAAGAACTTCATACTCTTCATCGTAAATTAGAACTGCAGGCTGATAATTCACTCAGTAAATTCAAAGAAACAGCTTGGGATTTAATAAAACAGTCTCCCACTCCAGTTCCTACCAATAAGCATTTTATTCGTTTGGCTGAGATGGAACAGACAGTAGCAGAACAAGATGACTCTCTCTCCTCACTTGTGATCAAACTAAAACAAGTATCTCAAGATTTAGAGAGACAGAAAGAAATCACTGAATTAAAAATCAAAGAATTTGAAAATATGAAATTACGGCTCCAAGAAAATCATGCAGATGAAGTGAAAAAAATAAAAGCAGAAGTAGAGGATTTGAGGTGTCTTCTGGTGCAATCACAAAAGGAGTCACAAAGTTTAAAATCTGAACTTCAGACTCAAAAAGAAGCAAATTCAAGAGCTCCAACAACTACAATGAGAAATCTAGTAGAAAGGCTAAAGAGCCAATTAGCCTTGAAAGAAAAACAACAAAAAGCACTTAGTCGGGCACTTTTGGAACTTCGGGCAGAAATGACAGCAGCAGCTGAAGAACGTATTATTTCCATGACTTCTCAGAAAGAGGCAAATCTCAATGTTCAACAAATTGTGGATCGACATACTAAAGAGCTAAAGTCGCAAATTGAAGATTTAAATGAAAATATTTTAAAACTTAAAGAAGCTCTTAAAACAAGTAAAAACAGAGAAAACACACTAACTGATAATTTGAATGACTTAACCAATGAACTGCAAAATAAACAAAAAGCCTATGGTAAAGTGCTTAGAGAGAAAGATGCAGTTGATCAAGAGAATAATGAACTGAAGAGGCAAATTAAAAGATTAACCAGTGGATTACAGGGCAAACCTTTGATAGATAACAAACAAAGTTTAATTGAAGAACTCCAAAAGAAAATTAAAAAGCTAGAAAGCCAACTGGAAAGAAAGGTGGATGAAGCAGAAATGAAACCTATGAAAGAAAAGAGTGCCAGAGAAGAAGTAATTCGGTGGGAAGAAGGTAAAAAATGGCAAACCAAAATAGAGGGAATTCGAAACAAGTTAAAAGAGAAAGAGGGGGAAGTCTATATTCTAACAAAGCAGTTGACTACTTTGAAGGATCTTTTTGCCAAAGCTGATAAAGAGAAACTTACCCTGCAAAGGAAACTAAAAACAACTGGCCTGACTGTTGATCAGGTTATGGCAGCGCGAGTGTTGGAGTCAGAAAAAGAGTTAGAAGAATTAAAAAAGAGAAATCTTGACTTAGAAAATGACATATCATATATGAGGTCTCATCAAGCTCTTCCTCGAGATTCTGTTATAGAAGACTTACATTTGCAAAATAAATACCTCCAAGAAAAACTTCATGCTTTAGAAAAGCAGCTTTCAAAGGATGCATATTCTCGGCCTTCAACTTCAGGAATAGATTCAGATGATCATTATCAAAGAGAACAGGAGCTCCAGAGGGAAAACTTGAAGTTGTCATCCGAAAATATTGAACTCAAATTTCAGCTTGAACAAGCAAATAAAGATTTGCCAAGATTAAAGAATCAGGTAAGAGACTTGAAGGAAATGTGTGAATTTCTGAAGAAAGAAAAAGCAGAAGTAGAGCGGAAACTTGGCCGCGTTAGAGGGTCTGGTAGAAGTGGAAAGACAATCCCAGAACTAGAAAAAACCATTGGTTTAATGAAAAAAGTAGTCGAAAAAGTCCAAAGGGAAAATGAACAACTGAAAAAAGCATCAGGAATATTGACCAGTGAAAAAATGGCTAATATTGAGATGGAAAATGAAAAGTTGAAGGCTGAATTAGAAAAACTCAAAGTTCATCTTGGACGTCAGTTGAGCATGCACTATGAATCCAAAGCCAAAGGCACAGAGAAAATTGTTGCTGAAAATGAGAGACTTCGTAAAGAACTTAAAAAAGAAACTGAAGCTGCAGAGAAATTACGGATAGCTAAGAATAATTTGGAGATATTGAATGAGAAGATGACAGTTCAACTAGAAGAGAGTGGGAAGAGATTACAGCTGGCAGAGAGTAGAGGTCCACAGCTTGAAGGTGCTGACAGCAAAAGCTGGAAATCAATTGTTGTTACAAGAATGTATGAAACCAAGTTGAAAGAATTAGAAACGGATATTGCCAAAAAAACTAGAAGCCTTACTGATCTTAAACAGCTTGTAAGACAAGCAACAGAGAGGGAACAGAGAGTTAAGAAATACACAGCAGACCTTGAGCAACAGATTGAGATTCTCAAACATGTTCCTGAAGGTGATGAGACAGAGCAAGGCCTTCAACGGGAGCTTCGAGTTCTTAGATTAGCTAATAGTCAGCTGGAAAAAGAAAAAGAAGAATTAATCCATCGGATAGAAATTAGCAAAGACCAAAATGGACCTGACAGTACCATATCTGATCCTGATCACCTAATGGAAAAGATCAAAGATCTAGAGACACAGCTCAGAACCTCAGACATGGAAAAGCAGCATTTGAAGGAGGAAATACAAAAGCTGAAAAAAGAACTGGAAAATTTTGATCCATCATTTTTTGAAGAAATTGAAGATCTGAAGTATAACTACAAAGAAGAAGTGAAGAAAAATATTCTCTTAGAAGAGAAGTTAAAAAAACTTTCTGAACAATTTGGAGTTGAATTAACTAGTCCTGTTGCTGCTTCTGAACAGTTTGAAGATGAGCAGGAAAATCCTGTTAATTTCCCCATATACTAAAAGGCCATCTCTAACAATAGTTTTATTTAACTATTTACTAACTTTGTAAGTTAAAATTCCATCTGGAAATCAAGCAAGTTTGACCTACATGATTTCCTTCCCAATACCTCATAGCTTTACTTAAATTGGAATTTTTAGTAAATAAAATTATATGAAAATTTCAACATATTAGGAAAGTATATTTTTGAAGACTGTTAGTATAAGTTATGTCTGTCAAATAGGCAATGAGCTATGGTAAATTTTTATACATTTATAATGTACTAATTTTTTTAAACATTTAAAACTGGGGTTTTATGTATACTTACATATTTATATATGTGTTAAGATTCTCAAATTATGTCTATATAAATGTTATTAAGTTGAGCCATATGTTTTGTTAAATGTCTAGCAATTTTAAATTCAGTGTAAATTATTTAATTTTTAAAGTAATGGTCCAAAATTGTTGGTTTGTCTTTTAAACTACCCACATACAATGGACCGAATCCAACCTCTGTACAAAGTGGAGAGCTTATTATTATATTTTTACTTCCAGAGGTTAAAATTCATTTGCTGTTTCTAAATAAAATTTTGAATAGATATTTGCAACTGGAAAATTGATTGCTTCAAATGCTAAAATGCTGCTATATTAAGACACTGAATAATAAACTGAAACTGAGATATTTTTACCTTATAAACATGGCAGAGTATTCAACATTAAAACAGAACAACAATGAAGCTGGTTTTTAATTGCACTTCCAGTTTATACAGTAAGTATTATATCTTTGAGCCTACCAAATTTCTGATTGTCTATTTTTGAAAAATGATTAAATAAACACTTAGCATCAAAGGCATACTCATATTTGTTCAGATTCATGTTGATAATAACTGGTTTTGAATTCATATAAGTATCTGGGATCGGCCAACATAAACCAAGATGGTGGCGATGGACCTGAAAAGAAAAAAAAAAAGTTAGCTTTAGCCTATATTATTTTTGCTCACTTACAAATCTTTTGAGTGCCTACTATTTCCCAGCCTCTGGGAGTTATTTAAGGTTCCACTTCATCTTAGCCTTTTTTTTTTAATAGATGTTTTCCTCCTGACATAGTATATATTTACTTGCTTATTGTCTGTCTTCCCCATTAGAATGTAAGCTTCATGAAGGCAGAGACACTGTTTTGTTAACTCTGTACTTTCAGCACCTGGAGACATTCCAGGAACATAATCAGGGGCTCCATAAAAATGGTAACGAATAACAGAGTCTGTTGCTAAATACAGAAGGTAGCCAGCTGAAAAATGTGGGTAGAAGTCATTCTAACCAAAGGGAATAACATGTGATAGAATAGTGCTTTTTGCTCTGGTTGCATTTAGTTAAGAACATACACAATGTGTATGTTTGAAAGATGAAAGTGGAGAGTTCTAGAAATTTTAGCAGGTGCTAGATCATGAAAAATCTTAAATGTCACTAGGCAGGGGAACAGTATTCTCATTCATTTGTAAAGACAGGACAGGAATAAGACTGAAAGATAATGCTTGGGATGGTGATAAAATAATTCAAGCATGAGTCTTGGTTTAAATTAAAATTAACAGCCCATTGGTTGTTGAGAAGTACACAGATACAACAGATGAGAATCTTTCAGAACTGATAATTAGATGTATGAAGTGATGGACAGAGGTGTTAAAAATGATTTCTAAGTTTTTGGCTTCAGTTAATTGTTTGGAGTCTGGGTTGGTCCAAACTGGATTAGTTCCAGTTTTGAACATTACAGTGTGAACCTATGTGAAATTAAATAGACAAGTCCAGGACACAGAAAGGGCAAAAAGTGTAAAATAATTTATTCTGTACATATTAACTGTCACCTTGGCACTCTCTTAACAAATTCTATAATCAAGCAAGTTTGAGAAATGCTTTCACGTGAAGTCATTATAGTACAGATGATTCAGAGAACACATATGTTCAACATGAATTTCCAAGAAGGAATATGTAGTATGTAGGGTCTTCCAGATGTTTTCATCACTAATTCTGAAGCACATCTGAAAGAACCAAAGCCCCACAGAACGCATATTGGGAAACAATGTTATTGTATAAAGATGGTGGCACGTGAGATGAAGACATTACTGAGTATCAGAATTACTGCAATTTGATGAAGACATTATTGCATATCAGAACTGCTGCAATTTGTAGAGTACTGCAGTGCCACTTCTACTTTGTTTCAGGAACATAAAGTGACATAACCTTACAAATTATTTTCTGCCATTACCTTGATTAAACAACCATCATTGCAATGCCATACTATTCCTTCAATTTTACCCTCTCTGCAACCATCAAACCAGGACAACAGATCACTGTGC EMBV3_37382 ATGGGCTCACGACCTGATGTGAATGAAAAGGAGAGCATGGACCCCGAGTACCAGCAGCAA Gene GeneID:516378|LOC516378:XM_002685601:231_cdna Constitutive 0 NULL GeneID:516378 2 GENE LOC516378 NULL intestinal alkaline phosphatase VII EMBV3_06857 TTGCAGTGGTGTCTCTTGTTGATGAGCAGGGGCTCTGACATGCGGGCCTTCAACAGTTAT Gene BVT0102_197361 - 1 EMBV3_06233 GK000004.2:94359402-94406699 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182419 TCONS_00184889 2 XLOC_110852 XLOC_111450 NonCoding TCONS_00184889 XLOC_111450 NonCoding NonCoding - 4:94394368-94398737 - TSS137569 2810 1 TCONS_00184889_3 106 0.213879003558719 2 0.357142857142857 5.58144487347448e-05 1.07338157864586e-05 0.000174540004533992 0.000549668074708877 8.95852623850891e-05 0.000358239840562995 2.8079101400715e-05 5.26216368191418e-05 3.93319348902289e-05 4.98847445945704e-05 5.22375174887194e-05 2.54637158409495e-05 6.129967591302e-06 2.84742107569185e-05 2.1907808426901e-06 0.000371473601820092 0.00172925111274655 1.34012787633613e-05 0.000145672412608786 0.00013051689101565 0.000117031488563536 0.000136077403242041 0.000126632404899155 0.000107671393922142 2.46563838382348e-05 0.000245517695686618 0.000414302611259201 6.84020358141443e-06 1.29642975049311e-05 7.81380390055872e-05 XM_005205681.1 NRF1 PREDICTED: Bos taurus nuclear respiratory factor 1 (NRF1), 0.0 3169 100.00 0.62491103202847 0 noncoding 1 1 1 1 -0.125817789217565 0.296007396761181 0.0100970360871756 0.847129686564398 ATTTTCTGACTTAAGACATTCACAGACTCAGGAGGATCTTCGTAGAGGCAATGAAGGGCAGTGCGGAAGCTGTTAGGGATCCCAGCTTGACTGTTCCCTGGCTGACGCAGGTTCGGTGGAAATGATGGCAACTGCCATGCGGTGGATCCATATCCCAGCCCCTGCAAGGGCTGCTCTACCTGTGCGACGGCCAGCCCCGCAGCTGGGTTTGGCTACCCGGCCCCAAGGCTGATTAGTCCGGAGACACACGTGACTTCAGCGGGCCAATCAGCTGTGTCCTCCCCGATACCACCCCTCCCTGTTGGGGAGTGCGAACTTGGGTTCCGAGGACACCGGTCCGTCTTTGTAAGGCACCTCCGGATTTCTGCTGTTCACATCCAGAGCGGTTTTGATCACCAGTGGACCCCAGGAGCTTTCAGTGTCTCATTCAGTCTGTGCAGGAGACCTGGGTTCAATCACTGATCCGGGAAGATCCCGTGTGCCGCGGAGCAACTAGGCCAGTGCGCCACAACTATCGAGCCTGTTTTCTCGAGCCTGGGAGCCGCAAGACCGTGGGCCACAACTGTTGAAGGCCCGCATGTCAGAGCCCCTGCTCATCAACAAGAGACACCACTGCAATGAAAAGCCTGTACACTGCAACTGGAGTTTGCCAACCGTACACTATCCCCTCTTGCTGCAACTAGAGGAAAGCCTGCAAGGCAATGAAGACCCAGCACAGCCATAAGTTCTATATATAAAACATGGGAATCCAGATGTGCAGCTCATTTTGTGTCACCTGTCCCCTGAGAGCTTGGCACAAAGAGCTGAGCTTCTGGAGGGAGGCTTATTAGTCTGACCCCAGCTCTCCTTTACTAGTTCTCGGAATTGGCCAAGTCTTAGCTCCCACACCTATAAAATGGAATCTAACCTCCATCTGAGGTTGTGGAAAGGATTAGAAATAAAGGTGTAAAGTATTTTGCATAGTGTCTTGTGCAGAGCAGCCATTTAATAACTGACAATTATTAGTTTCTTAAAGGGTAAATAAATTCAGAAGAAATTTGAGTTGAGACCCAGTTAAGTTACACCAACAATTTTATTGACAAGCGCATTAAGTTTGGGGAATATTTCTAGCTCCCCTCCCCAAGTATTAAATAAGCTACCTCTTAACTTCTTTGTGGTTCAGTTTGCTCATCTGTAAAGTAGGGAGTAACAGAGCTTTTGCAAAGACTAATAAATAACAACGTATAGTAACTCTCTTAGAACAAGGCACACTGTAAGAGCTGTACAAGTGCTCACTATTTTAACTGCTACCATATCAACACTCTGAATTGCAGATAGGCCATGGTTCTCATAAACTAGAGCTACGAAGGCTTTTGTACAGGGCTAGGGCGCAGGCCTGTCCTTACCGTACAAGGTGGCTCTGGAAGACTTGGGTTTTGGGGGTCCTGGCCCTGCTCTGCAGATGAGTATTATCCTGGTACCTTTGCCCTCCCATCTCCAACTCTTTGCAGAAATACACTCCAGTACTCAACAAACATCCGCTAACAGCCCACTGGTTTCTCAGGAGGGAGAAACTCAAATTCAGAGTGGGTTGGGGACTCATTCAGGGACCCAGCAGCAGCGGGAGCAGAATTCTCCAGCTATTTCAGAGTCCAGTCCTAACGCCGTTATCTCCCCGCTCTGTGCGCCTCCTTCCTCTGGGCTGTCTCCACTGTCCCAGGTGGATCTTCTCCAAGAGCTGCCAATCTGGAGCAAACAGCAGAGGCCAGATGGGATGCACTGATGGGTGTCCTTGATGCTAGCATCTGAGCACGAGCTGTGCGGAGGCCACAGGCTGGCCTGGTCTGAGGACCTGGGCGGCCCACAGCCCACTGAGATGGAGGTGCGAGAGGAAATGTAGGCTTGTCTTCCTCAGCCCACGAAGCTTCTGCTCCAGATAAGCTTCGACGTTCCCCCCGATACCAAAAGGGCCTACCACAGGCCCAGAGCTACTCCATCCACAGCTGATGCTTTGCAGGGGGCTGGGAGGGTGCTGATGAGGAGAGAAGAGGAACAGCAGCGGATAGGAAGGAAGGCGAATGCAGAAGCAGGCCCTCTTCGACGTGAGAAGTGGCTGGAAATGAGCCTTGTCTGGGTCTGAGTGAGGCCCAGGGCACACTGGCAGCTGGGGCTCTTCTTACAGGGTGAGTAGTCCCTTCTCTTCCCTGCCCTTCTGGTTCTCCTCGGCTCACTCATCTCAGTTCAGATGGCTCCAGTGGTCACCAGCATCGCCAATGGATCTTCTCAGATGTAGGACTTAAAGGCAAGAATTCCGAGCCCAAGGTAGTTGGTTTCGGTGAGCACCAGATCCTTGTCTGGAGCCTAGATGATAAACTACTTATTGCAGAGGACCCTTCAGCAGATAAAATGAGATAACAGAACCCCTTCTGCCACATCACTCTGTCCAGATGGCACCTTATCACGCTGGGCTGCCGCGGTCTGTTCACACAAAAACATCTCCTCGTCTCATCCTGTTTCTTGGGCAACTGCTATGCTTCATTCACCTGGCACATGGTAGGCATTCACTAAAGCAAAACTGACGCCTGGGGCCAGAGCTGGTCTACAGGTGGGTTTTCTTTTGTTGGCAGAGTATGTAAAAGACTTTTGATTTATTGTTGAAATCAGGAGATTCATGCACAAATCTGGACTCCTCAGTTTCTCTGGAAAATTTAGAAGTCAGGACTGTAGGGCCCATGTTCCTCCTGCTTGGAGACAGTCCACTAGCACTCAGGAGAGGCCACTCTCTTTAGAGATGCTCTCCACTCTGCCCATCTCCATCACTCCTTCCCCTC TCONS_00182415 TCONS_00182416 TCONS_00182417 r 3' 2693 TCONS_00182415 TCONS_00182416 TCONS_00182417 r 3' 5062 EMBV3_36211 GCTGTAGCTGTGCTCAAGATCAAGTGTGCAGCAGGGAGACAAAAAGCATTTGGGACCTGT Gene GeneID:782301|LOC782301:XM_002697423:141_cdna Constitutive 0 NULL GeneID:782301 23 GENE LOC782301 NULL similar to seven transmembrane helix receptor EMBV3_19633 TCGAAGCCTGAGTCCCCAAGCCCTCCCAGCGGAGAGGCCGGAGGACCTGGAGCTGCTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38896 TTCTCTCTTGCTGGAAGGTTCTTTTTCTTATGCAACTTGGCCCTGTCTACTCAGATGCCC Gene GeneID:505220|PTPN9:XM_002696630:167_cdna UTR3_Alt 2 NULL GeneID:505220 21 GENE PTPN9 NULL protein tyrosine phosphatase, non-receptor type 9 EMBV3_35028 GCTTCGGAAACAGAGCACCTGAGGCGACAGGTAGCACTAGCAGTGGCCTTGAACTTGAGA Variant GeneID:505792|MVK:NM_001015528:57_cdna 63^154 2 EMBV3_04873 GeneID:505792 17 GENE MVK MGC129086 mevalonate kinase EMBV3_08236 CCTGGACCACCAGGCTCCAAAGCATTATCCATCTACTCACGGCCTGACCTACACTGTTTT Gene GeneID:509961|LOC509961:XM_002691438:122_cdna Constitutive 0 NULL GeneID:509961 11 GENE LOC509961 NULL similar to Gastrokine-1 precursor (18 kDa antrum mucosa protein) (AMP-18) (CA11 protein) EMBV3_43137 GGTCTGGAGCCTTGGAAGAGGCTAAAAATGCAAAGCATGCAAAACCTCCAGGTGGCCAAA Gene GeneID:532832|LOC532832:XM_002684755:234_cdna Constitutive 0 NULL GeneID:532832 1 GENE LOC532832 NULL hypothetical LOC532832 EMBV3_42760 TTTCTGCCTCAGGCTCCACAGCCATTCCCAGGAGAGTCCTCGGGGGAAAGCAGGGCAAGA Gene BVV0102_036616 - 0 NULL GK000022.2:60172925-60179707 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129372 TCONS_00127696 TCONS_00127695 TCONS_00129369 TCONS_00127694 TCONS_00129370 TCONS_00127693 TCONS_00129368 TCONS_00129371 TCONS_00129367 TCONS_00127692 TCONS_00129375 TCONS_00129373 2 XLOC_078105 XLOC_077723 Coding TCONS_00129369 XLOC_078105 NonCoding NonCoding - 22:60173915-60179609 - TSS96258 4468 1 TCONS_00129369_8 196 0.270590868397493 3 0.215703495520815 2.00629975587216e-06 0.000877628387443936 0.000176127115414427 0.00119282019655426 0.000936716622256443 0.000136902478584742 0.000147737640651794 0.000212793471232537 0.000544124599242845 6.75451462078463e-06 9.34358752713828e-05 8.63421998340271e-119 4.4045944116783e-05 6.23625942736883e-09 2.11984063799443e-10 1.29604826156886e-29 1.36532843264827e-08 0.00043226122629162 0.000289565265285664 1.50551791933447e-14 3.73857383397488e-18 6.39754684465162e-09 1.01892068178022e-65 0.000170325058605709 9.43515823203159e-06 0.000880921148110691 0.000885747879481186 9.03130687454662e-05 8.48977836575028e-80 2.40740018179271e-05 XR_239484.1 LOC101905145 PREDICTED: Bos taurus uncharacterized LOC101905145 (LOC101905145), 0.0 3745 100.00 0.464413607878245 NM_019018.2 FAM105A Homo sapiens family with sequence similarity 105, member A (FAM105A), mRNA. 2e-16 93.3 83.00 0.0217099373321397 0 noncoding 0 0 1 1 -0.147609237004448 0.353599990190701 0.0317032867604199 0.529478211519539 GCCCCTGGCTGCGCCCGTCGCGGCTGCCGGTAGGGCCCGCCCACCACCTTCCGGCGGTGTCGCGGGGTTGCCTTCCCCCGCGGCCGGCGCTTCCTTCCTGGGTAGGGACTAGAGGGGCGGCGCTGCAGCTCACTGGGGGCGCGCGTCCCGCTCTTCACCGCGCCTTCCGGCCCGTGGGCGCGTTCGAACCGATACCGCTCTGCGGAGCTCAAGCTCGACCTCGGAGTTGGAGATGAACAGACAGGTTTAGAACTTAAGCTTCGACCTGCGCCGGCTGAGCAGTTTTCTGACAGCCACTCTCTCACCGTCTTCGGGCATGCCCTGCGCAGCTTCCTCAGGGAGCTTGTCCTCCTCTGCTTCCCCTCGCCTCCACCTCTCCCTTTACTTAGATTAAGTTGGCTGTGGGTGACGTTTAGTGTAGTTCCTAGTCCGGATGAAGATGCGGGCGAAAAGAGGCCCCGCAACTCACCCAAGAACGCGCGGCAAGTAATCAGCAGTTGGAATTTCTGCTGAGGACTTAAGGCATGGCAGCCTGTGGAACCCTCATCCCATCCCTCAGATTAGATGGTCATCCCGCGGCTGCGTCCTGTCCGTTCCATGATAATGTCAGCAATGCCTGGAACAGCGTACTCTTCCCATCCACCCGTTCGTTCAACAAACATTGGTTTGCACCTGCTCTGAGCCAGACACTCCGGCGCACTGCGATGATACAAAGTCTGCAGCCTTAACAAGCTCAGTCCTTAGTTGGGAAGCTTGTGACGGTGAGGTGCCAGAGCAGGTACACCGGCGTGGTGTGCAAGCCCAGAGCGGGCCACCTGGACCAGCTGGAGAGCCGCGGACAGCACCAGAAGGTGGTATGGTGCGGAAACGGAGGTCCTAAAGGAGGATGGAGTTTGTCCAAAATCACAAATTGAGCAAATGCCTTTCCAGGCCTAGACCGCAGGTCCAGCGTGCAAAGAAACTGGACCTGGCCGCAGAGTCAGGGGGTTCCTTCTGTTTCAGCAGAAGATGATGTAGCAGGCCAGTCTCCAAGGCGCATGAAGGCTTGATCATCTCAGCCTCTTGGTTTCCAACGCTTCTGCTCCCTCCTTGCTTTGAAGTCTTTCACATCGGACCTTTGAACCCCCAAGTCCAGGTCAAGCCTGCCTCTGCCTTCTCCACACCTTGAGAAGACTGCTGAGTATAGAGGGAGGCAGTCACTCGGGGACCCTGTGGAGCCACGCACCCATCATGTGCTCCAGCCTCAGCTGAGCGCTCAGAGCGTATCCTGACTAACAGAACATTTAATCATGGCCTGCGGTAATCAAACAGCGCAGCACTGGCATAAGGACAGACACAGACCTACAAAGTAGAGCAGAGCATCCAGAAATAGCCCTCAGCGTACGAGCAAGGCGGCCGGGCCCAGGCACAGCGGAGGGCTGAAACTGCGAGTTTTGGTGACTTTGGGCTTAGCGGGGCCTGTTGTCTTGTTTTTCGACAATTTCCTCTTCTGATCAGTGTCTCAGACTGAGAGAGGCGATAGAAATTTAGGCTTTAGCGCTACTCTCAGCTACCGCTCTGGAGCCCTTGCAGTTTCTGCTGAGCCTCTGTGCGGTGCTCGCAGCTCATGATGTCAGATTCACATTCTTTAACTCATAATTCATTCTTTTCCTGACGTTTCAGTCTCAGGGAGATCATTTGCTTGCTGGTTAGTGGCTGCAAACATGCATTTAAAGCTTTTGAGAGAATACAATGCACGATGAAGATTATGATGCTGATTGTAAGCAATAGCATTCCCAGGGTCTAGGGTGCACTTCAGAGCCGTGACCCGAAGATCCAAACCAATCACGATCGAAGCCAACCAAAGGCCCTGTTGAAGGAGGCCCCCTTGTAAGCTAACTGGCTTCGTCTCTGGTCTTATATTCCCACGTTCTCACCAGCATTTGGAATGACCTCCCTTTCCGATTGTTGCCAAGCACACTGGTATGCTTGTTATTTCATCTCCAGGTTGATTTCTGGGGACAGAGGGACAGATGATTTTGCTGGCACCTTGGAGGTGGTGCACTGACACACAACCAAATAACGTTGATCCACATAGTGAGAACATTGCTGCCTTTTTACTCCTTTTTTTTTGTTTTAACATTTTTATTTTTTTGGCTGCACAGCTTGGATCGAACTGTGATCCCTGACCAGGGATTAAATCCCGGTTCACCGCAGTAAAAGCCCACGTCCTAACCATTGGCTGGCCAGGGAATTCCTGTGCCTTTTTAATTCTAATTCAGTGAATCTTAGGGGGTGAAGTTATGACTCTCCCTTTTTAATACTTGCTAGTCTCACTTTTTATTGAGATTTTTGTGGTTCCCAGCTATTTGTGGCAAGTGATAATGTTTTTCCGTGTATGGCGAAATACTTTTATTTAAGTCAAACTTAACACTGTGTCTGCCTGGATCTTGCGTAAATGATGAAGACGGCTCATGTCATTGGGGTTGGAGAGACCTGCATGAAACGGGGGTTGGCTGGCAGGGAGCGGAGGCTGAGCAAGCCTCCTCTCGCGGCCCTCCTCCCTCTGCTGGGAAACAGCCCTAGCAGCACCGCCGAGGGCTATCAGGAGAGTTCAGTGAGGTTTCTGGCACCGGGCCTGAGCACTGGAAGTGGCACAGAGAGGGGCGTCCGCGCTCTGCAACCCAGAGGCCTGGGCTTTTCGTCCCTTTGCCCTCTGCCTGCTGTGTGTGCTGCCTTCCAGTCGTCTTGCCCTGCTTTCCCCCGAGGACTCTCCTGGGAATGGCTGTGGAGCCTGAGGCAGAAAGTGGGGCTGGGGCTGGGGTCAGGTCCGCCAGCCTTCTCTGCTGGGACCTGTCTCCATGCCAGCAGACACGCCCCACTGCAGCGGGGGAACCTGGCAGAACATGCTGGGGAAGCAGCTGAAGCCTGCAGGTCTCGAGGGCTCTGGCTGCACCCCCATCCCACTGATGTCACGTGGCAGCGGGGTCAGAGGTCAGGGGAGCATGGTCTGACCAGAGGACAGGCCGTCAGGCTGTTTCCGGTGTAAAGTCTTAGCTGTCAGACTGTGCTCCTCTGACCAGGTGGGAGGGAACTATGAGCCATTCACTAACTTAATAAATGTGAAAATAGACTCCACAGTCTAGTTAAATGTCTATATTCGTTCACTATGTCTGCAGTAACCAATTCCTACAAACGGTGTCATAAGACAAGTCCCATGCATTCTGTTACAGTTCTGCCTATCAGTGTCCAAAACAGGCCTCACTGGGCTAAAGTCCAGGTGTGGGCAGGCTGGGTTCCTTTCTGGAGGCTCCGGGGAGCTCCCACAGGCTGGGTTTTCCAGCGTCTACAGCCTGCCCAGCTCCTGGACTCATGTCCTGCTTCCACCTTTAAAGACAGTAACGGCCAGCTACGTCTTCTCATTTCGCCATCTCTGGTTCCTTTTCTCCCTCCTCTCTCCCAGGGCCCACGGGATAATCTGGGATAAGCCTCCCCCCTCAACCTCATCTCAAGATCTTTAACTGAGTCACATCCGCCAGGTCTTGTTACCGTGCAGGCCAACAGTGTCACAGGTTCCAAGACGTGAACATCTTTGGAGGTCACTGTTCTGCACAGCCAGCCTCCCCCGCAGGGGTCCCGTCACAGCCCAGACTGATTTCCACAGGTTTTAGTCCCTATCAGAGAGCATACTTCTGTACTGCTTGTCCTGGAAAAAGATTTCAGGTTTTTCTCCGATTATGCTAACTTGGGTCACACGCTCACTGCCGAACCAGTGGCCATGGCCAGTGAAAGGGACCCGAGTCTCAGGTCCTTCCTGCAGCTAGAGTGGGGTCAGCCCCCGTGGTGACCCGGAGGAGAAGAGCCTGGTGCCTCTGAGGACAGTTGAGGAGGGAGAGGACCCTGACCCCTGCAGACCTTAAAGAGCTTATATCCATATTCAGGTGGAAGAAATGGAGCGGGGTGGTGGTGGGGGACACGGGGCGTGATTCCAGCTTGTGGGGACCAGTTCTTGCCAGGACGTCAGCTCCCGCCCTGCAGCTAAGGGGGCGCTAGCAGAGCAGCTCAGCACTGGCAGTGCCATGGAGCACAGTGGTGGCCTGGTGACAACCTGATCCGAGGTTAGTATGGGACATGCCAAGGAAGGTACATGGTTAACACAGTCACTGGCAAGGTGGATAGCCTTAGAGAAGACGGAAATTTCCATTTCACTCCTAAAAGAATCTTTAAAACCAAAACTCAAATCAAAGAGCAAAGTATAATAACTTCCTCTGGGCAAATTTATAATTAATCCTGGATTAATTGGTCTTAATGAAGTTGAATTAATTACTAGCTGTTTGTAAAGAACTTTGAACTACCTTAATACAAAATAGCATTAAAGGAACAGAAAGGAACCAGCATTGCATTAACATTAAGAAGAAATCCCAAATAATCGCAGTTCTGCAGGCCGCTCCCTGTCAATCATTTCCCAGGGACTGGGCCCAGCCTTGGA TCONS_00127693 TCONS_00127693 TCONS_00127693 r 5' 0 TCONS_00127693 TCONS_00127693 TCONS_00127693 r 5' 0 EMBV3_24497 TTGAAAAACTCAACAAAGCCAAGCAGAGACTGGGGTCCCGCCCTCCTGAAGCACCGAACA Gene GeneID:515755|SLC6A9:NM_001102032:55_cdna Constitutive 0 NULL GeneID:515755 13 GENE SLC6A9 MGC148345 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 EMBV3_09441 CCTTGGAGCATCAACACCATACGTGGGAGGATTCTGCGCCCAGAGAAAAGCAGAGCCCTA Gene BVT0102_387075 + 0 NULL GK000018.2:43763150-43834324 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18951 CAAACAGTGGACCCCGTTCCTCTATGACTTCTACCACTACTTCTACATGCTGACCAACGC Gene GeneID:528416|NTSR1:XM_002692409:362_cdna Constitutive 0 NULL GeneID:528416 13 GENE NTSR1 NULL neurotensin receptor 1 (high affinity) EMBV3_06146 GGGCCATGTTCATGAGTGGACTAAGTGAAAGCAAACAGACACACATACATCTGAGGAATG Gene BVT0102_116043 + 0 NULL GK000004.2:64278656-64321837 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181780 TCONS_00181783 TCONS_00181784 TCONS_00181774 TCONS_00181777 TCONS_00181779 TCONS_00181778 TCONS_00181787 TCONS_00181782 TCONS_00181775 TCONS_00181785 1 XLOC_110693 Coding TCONS_00181777 XLOC_110693 Coding Coding KBTBD2 4:64302754-64325381 o TSS135972 4324 1 TCONS_00181777_2 349 0.0469472710453284 5 0.809113409352073 0.000522226914249599 0.00137854933938734 0.000911379976450617 0.000106559454910319 0.0015635103596866 1.44686575903424e-05 0.000647865976044384 0.0015146335340393 0.000691249980891068 0.000729542667986651 2.77692505373409e-05 1.25387575503988e-24 4.20968561938122e-22 1.80921709553201e-21 0.000100740766377767 0.000651089120379842 5.90981980616755e-08 7.21926220992515e-17 0.00026884066114199 0.000118582390529227 0.000120025354987075 7.42078725392965e-05 3.71615807025537e-08 0.000421712157721844 0.000397921578160899 0.000479370581539655 9.84080893821697e-17 6.47275228820246e-17 3.13322654904564e-08 0.00024014745263846 NM_001102013.1 KBTBD2 Bos taurus kelch repeat and BTB (POZ) domain containing 2 (KBTBD2), 0.0 2488 100.00 0.318686401480111 NM_015483.2 KBTBD2 Homo sapiens kelch repeat and BTB (POZ) domain containing 2 (KBTBD2), mRNA. 0.0 1939 91.19 0.319380203515264 TCONS_00181777_2 sp|Q8IY47|KBTB2_HUMAN KBTB2_HUMAN Kelch repeat and BTB domain-containing protein 2; 0.0 664 97.55 0.934097421203438 2 coding 0 1 1 1 0.382683071648937 0.209687221814638 0.0278012613912086 0.581754277854623 GAGTAGGAACACAACTACCTGTTAAATGATTTGAATCTTAAGTATCAAAAACAGACATTTAGTCAGACTAAGCAGAGTGAGAGCATACTGAACAGTTAATAAAAGATGCTTTGAATTAGTTTCTAGATTCTGCCGTAATCCCAGACATACATATCTTGGTGTGTATTCAGTTGATTTATCTGGCCTAAAGAAGCTCTTCAGTAACATGTGTGCATTTAGTTTATAATTGGTCACGTACATTCTCCAGATTGGGCTTGTGCCAAGAATGGAAGTTATGCAGGTAGGTGAAGTCTATGTGGGCATTTCTGACAGTTTTGTGATCTGTGAATAACTTCCATCAAACTAGAGAATAGATCTGTGACTTTCTGCTTGCTAGCAAGCCGTACCAAGTTAACCACACCGGAGTGGGCCACAGCCTACGGCTGTTATAAAAGCCTCGCTTACTGAAGCTGAAGGCTGTCCTTTGGAGTTACTGGGGGGAGCTGAAGCCGAGGCATTGCAGTACAAACTAGCTGAAGAGCCTTCCCTCCACACGCCAACGGTTCACTCCGCAGAACTGCAAGCTATTTCAGGTGCTGCTTTGAGTTTTCCCTTGGCCTTGAGACCAGGACATGAAGTCTCTCTTGATGAGTACTGGAAAACCGAACGTGCTCTGTTACTCCAGAGGATCCACCAAACATAGGATGTTGCCACAAAATCTACCTCGTGTGTTACTCTCTTTTGAGATGAACAGCAGTTGCAAATTTGAGCAAGATGTGTGCAGACTGTGTTGAAAAACTCTGAAGAACCTAATTAACACAGGATGACCTAATAGTAATTCTAAGCCTATAGCAAGATACTCTTCATTAGTGAGTGTGTCAGTCTTGGTTCTGAATGCTGCAGATAACAGCAAGCAGAGTTTCTCCTTTTTTTATTTCTGAAGCATTCACTTGACCTTCCATCAGTAAGACTGACTTTATTCTAATCTGTTCCTGGAGATATTAATGGAATACAGTCATGTCCACTCAAGAGGAGAAGCAGATCAATACTGAATATGCTGTGTCCTTGTTGGAGCAGTTGAAATTGTTTTATGAACAGCAGTTGTTTACTGACATAGTGTTAATTGTTGAGGGCACTGAATTCCCTTGTCATAAGATGGTTCTTGCAACATGCAGCTCTTATTTTAGGGCCATGTTCATGAGTGGACTAAGTGAAAGCAAACAGACACACATACATCTGAGGAATGTGGACTCAGCCACCTTACAGATAATAATAACCTATACATACACGGGTAACTTGGCAATAAGTGACAGCACTGTAGAACAGCTTTATGAGACAGCGTGCTTCCTGCAGGTAGAAGATGTGTTACAACGTTGTCGAGAATATTTAATTAAAAAAATAAATGCAGAGAATTGTGTGCGATTGTTGAGTTTTGCTGATCTGTTCAGCTGTGAGGAATTAAAACAAAGTGCTAAAAGGATGGTGGAGCACAAGTTCACGGCTGTGTATCATCAGGAAGCTTTCATGCAGCTGTCACATGATCTACTGATAGACATTCTCAGTAGTGACAATTTAAACGTAGAAAAGGAGGAGACAGTTCGTGAAGCTGCTATGCTATGGCTGGAGTACAACACAGAATCACGATCGCAGTATTTGTCTTCAGTTCTTAGCCAAATCAGAATTGATGCACTTTCAGAAGTAACACAGAGAGCTTGGTTTCAAGGTCTGCCACCCAATGATAAGTCAGTAGTTGTTCAAGGTCTGTATAAGTCCATGCCCAAGTTTTTCAAACCAAGACTTGGAATGACTAAAGAGGAGATGATGATTTTCATTGAAGCATCTTCAGAAAATCCTTGTAGTCTTTACTCTTCAGTCTGTTACAGCCCCCAAGCAGAAAAAGTTTACAAGCTATGCAGCCCACCAGCTGATTTACATAAGGTTGGGACCGTTGTAACACCTGATAATGACATCTATATAGCAGGTGGTCAAGTTCCTCTCAATACGATCTGGAACTTGACCGGTGGTCTCTGCGGCAACATATATCTGAACGTGTACTCTGGGACCTAGGGAGAGATTTTCGATGCACTGTGGGGAAACTGTATCCATCCTGCCTTGAAGAATCTCCATGGAAACCACCAACTTACCTTTTTTCACCGGATGGAACAGAGGAGTTTGAAATGGATGGAGAGATGGTTGCACTACCGCCTGTATAGTCAGGAGTTCAGGGAGTGCACGCTTCGTCTGTTTGCTTTTGTCATTTTCTTTGCTTAATGAGAGACTATGAAAGGACTGAATATGAGTACATAAAAAAATCTATCTTTGATAAATTTTATTTTTATGCCCTACTTAATATTTGCATCAGTATAATATATATCAGTGAGTCTTAAAGATATGCTTCCATAATATGAAATAGATTATCCAATAATTGAGAAACTTTTATGTGTATCATGAGAGCATAACAATCTGGATTATCTAACATTGTTAGCCCTGTGTATGTACAGTTCCAAAAGTTCACTTATTAAAGTAGTTTCCTGTTCCTAGTGTGGTATATCGCAAATTGTGCTGAGGTTATTTTGGTAAATGTATTTCATTCCCGTGCTTCTGTTTTGAAGTCCTGGAATGTAGTTTTTTTCAGTGTAGTTAACTGAGCTGCACTTAACACTAGTGTCCATGTTGGCATAGAAATGTTGTCTGAATCCTATAGTTGAGGAAGATCTTCCATTTTATGGTATTGCACAGGGAAAGTATGACTGCAGGATCAGTCTAACTATATACTATTAGGTGCATGTACTCTCTTCACTAACTTATACTTGTCTATCTAGAATACAGGTCTTCCAACCAGCTGGTCATTTACCAGGTGTGGACTTCAGTTGCTGGGCTTGCAATAAGAATTGCTAGTCCCTCATTGTGCGGGTCTGTGTGGAGCTTTAATCAGTAAATGCCTCCACTTTCTGTATTACATTAACATTGGCTCATGCATATAACTACCTGCTGCTGTTGTATTTCTCCATCTTAAAGATTTAGAGTGGGTTAACCAGGTCATTACATCTTAATTTAATAAGCATTACTGTAGAGTGATTGTGTATAGATATTTGTTAGCTGTCAGGGTGTGTTTTTTTTAACCTGTTGTGTGTGGGGGGTAGGATTAGAAAGGTGAACTGTTCAGGAATTCTCTGCACTAGCGGTGCAGAAGAGCAGATAACTAGTGCTGCTCTGGCATTAATCCCAGGAACCACTAGCAGTAGCGGGCCGCCGCCAATCTAACATGAGCACAGGTGCTTCATGACAAACATTACTAGCATGTTCAACTGCATAATGTTCTGGCACTGTATTTTGAATGACATTAATTTATTAAATAAATTGTATATATTCAAAATCTGTTTTTCTTTTGTGATGGGAATGGTGTGATTGTAGTTTTATGGGGTCAGCTTAGTTAACAGGTGATTTCTTCAGAATTTTGTTTGAGATTATATGTATATTTGTCCAATTTGAGCCTTACTGTAGCAACATAAATTACAGATCAATGACTGCCTTTCAACTGCAGTTGCCTATTAGAATCATCTCTGGGTACTTTTGAAAAAACTTGGGACAAAGGAAACCACAGTCTGACAGTCTTCAAAGCAGTAATCTTTTGGAACCCCATTGGTTTAGGCCTTAAAGGTTTGATTCTAGATTACCTAGATTTGATTCTGGTCTACCTAGAGTATATCGTTGATTATGTTTTGCCGCCCACCCCTTATTGAGTGAAGTCCAAATTAGGTCTGTTTCAAAATTATAGAAAATCAAAGAAAAAGAAAAAATCCTGAGAGAAGCCAGGTGAAAAAAAATACCTATACATAGTTATTACATCCAGCTTCTCTTCAGGCAAGAAAATGGAATAAAATATTTATAAAGTGTTTAGAGTAAAAGCAACATAGAATTCTGTGTCCTGCAAAATTATCCTTCTAAAGTGAAGGGAAAAAAAAAGATTTCTTGGCAATTCTCTAAACTTCTTTGCCTTACTATCACTTTTATAACTTGTGGCAAGCTCTGAATCTTAGATGAGTTCAGCTCTGTCTGCCTTACCTAAATACAATTGGGTTAGCTGATAACTGCCACAGAAAATAGCATAATGGTATAGACTGTTGACACTATAAATTTGTGATTATCATCCTCAACTAAGTCCTCAACATTAGCAACCTATCCTTCATTCTTCAAAACAATCTGAAACCTGTAGTCTCCTTAAATCTTCACCTTCCCCAAGTCTGTTAGCAGATTACTTCTGAACTATCCATCACCAAATTTGTCTGTACCTGCATCCTCTATAGGTTCTTCCTCTCCTGTTTAGAAAGCATAAAAGCATGAC TCONS_00181789 TCONS_00181789 s 5' 0 TCONS_00181789 s 5' 19083 EMBV3_15324 CATGCGGCTGTCCAGTTGTCCCAGCATCACTTATCGGCAAGACTGTTATTTCCCTTGTTG Gene BVT0102_185874 - 1 EMBV3_25249 GK000003.2:94331674-94414996 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32936 TAGTACTATCAAGCAATTCCTGGTACTTTGGACTTCCATGGCTTGTTATATAAAATTACA Gene GeneID:537932|UBR3:XM_002685283:73_cdna Constitutive 2 NULL GeneID:537932 2 GENE UBR3 NULL ubiquitin protein ligase E3 component n-recognin 3 (putative) EMBV3_20961 CTTCCGGAGACAGCTCCTCTACTGGTTCTTGAAGGTGTATGAATTCCTCTCCACGTTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06150 CTTCTGACCATCAAGTGCCTGCTGATCCACCCCAGCAGGGGCTGAGGGGCCCATGGCCAA Variant GeneID:617703|UBE2S:NM_001076472:187_cdna 603^799 4 EMBV3_14966 GeneID:617703 18 GENE UBE2S NULL ubiquitin-conjugating enzyme E2S EMBV3_31611 CCCAGACCACTTAAATCAGAGCTCGTCTCCTTCTCAAATGTTTCCCTGGATGAGACCACA Gene GeneID:100295814|LOC100295814:XM_002685311:150_cdna UTR3_Alt 2 NULL GeneID:100295814 2 GENE LOC100295814 NULL similar to homeobox D8 EMBV3_14040 GGTGACTTTCATGCTGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGCAA Gene GeneID:532148|LOC532148:XM_002697711:30_cdna Constitutive 0 NULL GeneID:532148 24 GENE LOC532148 NULL similar to Uncharacterized protein C18orf34 EMBV3_02966 AACCCCCACAAGTGGGTGCGACACCTCAGCCACAGCGACGCCTACGTCATTCGGATCTGA Gene GeneID:768040|AP4M1:NM_001077099:338_cdna Constitutive 0 NULL GeneID:768040 25 GENE AP4M1 MGC137860 adaptor-related protein complex 4, mu 1 subunit EMBV3_21321 CTTAGGTTTCAAGAGATACCAAGTAATCCACATTTAAGTCAAAGTATCAGACAATGAAAC Gene BVV0102_276864 + 0 NULL GK000009.2:54030372-54038462 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237395 TCONS_00237398 TCONS_00237394 TCONS_00237396 TCONS_00237397 1 XLOC_144705 Coding TCONS_00237394 XLOC_144705 Coding Coding UFL1 9:54036726-54046843 j TSS177483 2669 1 TCONS_00237394_1 273 7 0.736852510873863 0.000220059192844183 0.00124627467356801 0.000239784319159097 4.87644550037842e-13 0.000226710478792004 0.00017918904185606 3.82631539611273e-45 1.29810389943788e-188 4.76927977207402e-05 0.000145036977202914 4.869216080304e-05 5.80911367150334e-05 3.19020743465105e-05 0.00012708002731628 1.54653224401507e-05 0.000745285003278364 0 0.000921322410205158 3.2300878619912e-19 5.10331938361691e-05 0.000161795592267852 0.000678747259208019 0.00174861020765208 0.00202874295140754 1.37037162447805e-26 0.000113799113134954 0.000301211464493217 9.50021981875221e-39 0.00012558572942885 0.000157048642668739 XM_005210858.1 UFL1 PREDICTED: Bos taurus UFM1-specific ligase 1 (UFL1), transcript 0.0 4470 100.00 0.928062944923192 NM_015323.4 UFL1 Homo sapiens UFM1-specific ligase 1 (UFL1), mRNA. 0.0 1755 74.85 0.925814911952042 TCONS_00237394_1 sp|A1A4I9|UFL1_BOVIN UFL1_BOVIN E3 UFM1-protein ligase 1; 0.0 554 100.00 0.996336996336996 0 coding 0 0 0 0 1.27204276827951 0.00984693280105124 -0.0726122978765185 0.331900560400721 CCCTCGAGGTGGTACATTCAGTTTACATGTCTTCAACTTCTTCGGCCTCTGGAACTGGTAGAAAGCGCACGATCAAGGACTTGCAAGAAGAGGTTTCAAACCTTTACAACAATATTCGATTATTTGAAAAAGGGATGAAGTTCTTTACAGATGATACCCAGGCTGCTCTTACGAAACACTTACTGAAAACAGTGTGTACTGATATCACTAATCTCGTTTTCAACTTCTTAGCTTCGGACTTAATGATGGCAGTAGATGATCCTGCAACCATTACCAGTGAAGTAAGAAAAAAAATTCTAAGTAAATTATCAGAAGAAACAAAAGTGGCTCTCACAAAACTCCACAACTCTCTGAATGAAAAGAGCATAGAAGACTTTCTTGCTTGTCTGGATTCTGCAGCAGAAGCTTGTGATATTATGTTGAAGAAGGGAGACAAAAAAAGAGAAAGGCAGGTACTGTTTCAGCATCGACAAGCACTGGTTGAACAGCTAAAAGTCACAGAAGACCCTGCTCTTACTCTGCATCTCACGTCGGTTCTGTTGTTTCAATTCTCAACCCATAGCATGCTCCATGCACCTGGAAGATGTGTCCCCCAGATCATTGCTTTTCTGAGTAGTAAAATTCCAGAGGATCAACATGCTCTTTTAGTAAAGTATCAAGGTTTGGTTGTAAAGCATTTAGTCAGTCAAAATAAGAAGACTGGGCAGGGAGAAGATCCCTTGAGTGATGAATTAGACAAAGAACAAGAGGATATCATCAATACAACTCGTAAAGAACTTCAGGAGCTTTCCTCATCCATTAAAGACCTTGTTCTCAAATCTAGGAAGTCATCAGTGACAGAAGAGTGATGATTTTAATTTACTTAATGTTGTCATACAGTAAATATTTTTCCCTTTAAATAAGTTAAAGGTGAGTGGTTACCAAAAAAAAAAATACTCATTTCACAGTCCAGAATCCCAATAGCACCTCCCACACCCACAATTCAGTTAAAACAGTAGCACTGTATTCATTGTAAGTTTAAAAAAATGTAAATTTTTGTAAATTGGGCTCTCCATGGAAGGTTTCTTTTTCACATTATTCTAAAAATTATACATTTCAAGTTTATTTTCTTCCTAGAAGGTGAATGAAAAATAAATTTTCTGATATCTTTTATCTCTAGGAAAGGACTCTTTTGTTGTGTTACTAGATTTCAGGTGACATGTGTAAATATAATTTTCATAGAAACTTAAAATGTGGTCAGTGTCTTTTAAAGAAAGGAAAAACCTTTAGTATCAAAATGAAAATAGTGTATTTTTCTTTAAAATTAATAGAGAACGCTTCAAAAGAAGTTTGCCAACTGAAGGCCTCTCATTTCCCCCACAAGAGTGAACTTCTGTGTGTCTGGGGGCTTCAGGGATGTGTTTACAGATATAGAAGAATACCTGAGAGTCCCATGCATTTCTGTGCTCTATTCTAAAATAAGATGCTAACAAGAGTGAGAGAAAAAGTAGTAATTTACTACTTACAGGTGTTAAATCACATTTACTAAAAATGTAGTACAAATAGTTTTCTATAACCCAGTTTGCATTTCTGAATTTCATTTTTCATATCAGTAGACACTGTCACCTAATACTTTGTTGTAGGGGATCTATAATGCATTTAAATCGTTGGGACTTTTTTTTTTTTCAAAAATAGAAACTTATTTAGAAATAGGTATTCTTAATTTATAAAGATTAGCAATTAAAAGACTAAAATAGTTCCTTGGAGTAATAATTTTAATCAAATGAGTTTTAAGCAACAACTTATTGTATATAAAAAAGGAATTATTTAAAATAGTAAATTAAATCTCCAATATTTAAAAAAATACTATTTTATATTATTCCTTATATGGCATTTAAAACAATGTTTTAAAATGTTTGAATACAAAGATCAGTCTACCTCTACCCTAATTCTAGACAAAGTATTAACATTGATTGAAAGAAATTAATAAATTTGCTAAGCAATGTCAAAGTTGATAGGAATATAACAAATTTTAAAATATTTTCCATTGGTAATTTTCTATTAATGTATTTTCATAAGGGCAAAGAAGAAAAATGACAAATCCTCTGTGACCACAAACTCCACTTAGTCGTGTTGATTCAGGTTCCAGAATACACCCAACCTAATTTTTTATTCAGTGCTTGTTTAAAGATCTTATTACTTAGGTTTCAAGAGATACCAAGTAATCCACATTTAAGTCAAAGTATCAGACAATGAAACAAAAAGCCATTCTTACTTTGTTGCATTAAACTTTCATTAAATTCTTTTTATCAAAATGGTTATTTTTCCACAGTGAATAAGCAGTTTTTTATTATTTTTGTAAATAAAATTACTTAGCTGATTTTGTATGTAAAAATCTAATTTCATTAATAAAACAAAAACTGTTAAATGTTTACTGTGCTCTTAATGGGCAGATTTAAGAATGTTATTTAGAATAAAGTTCTCTTTCTATTAAATTTTATGTGCTTTGAATCTTCTACTTTAACTACTAGGATTGATGTATATGTGTAATGTATTTACATTTTAAAATTTTTATTCTGAATATTTTTAGAGGATTTTATTACGTTTGTACACAAAAATAGTTCCATAGTCCTCTGTGCCTTTTATTCCTTGCAAGTTTGCCATTCATGAACCATTTCACCTTAATAAAT EMBV3_15645 TGGCCCTCGATGTGCTCTGCGTGTTGCTGGATGATTGTTGGAGAAACCCTGTCTGTTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26000 CCTGAGGGTTATTTGTGGGCCTAGTGGCTTACATTCACTGTAGTGGGTCTGGGTTAGGAA Gene BVV0102_230321 + 0 NULL GK000019.2:51949687-52045286 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17760 GGCCTTCCTGCATGTTGTCTTAGTTGAAAGTCCCCAGTGGTTAGCCTTGCTGTAGAGCGA Gene BVV0102_017385 + 0 NULL GK000013.2:62151620-62165597 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38458 GTAAAGAGCAAAACCACGTTTGTAGGAGCAATTAACATCCAACTCTGCAGTGTCACACTC Gene GeneID:513301|PIK3C2G:XM_002687756:69_cdna Constitutive 0 NULL GeneID:513301 5 GENE PIK3C2G NULL phosphoinositide-3-kinase, class 2, gamma polypeptide EMBV3_06419 ACCCTCGACTCTGTGGACTTCTGGTTCTGTTATCCTGGCTCATTAGTACCCTGCTTTCCT Gene GeneID:512956|LOC512956:XM_002688715:6_cdna Constitutive 0 NULL GeneID:512956 7 GENE LOC512956 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_28719 ACTTCCCACTCTACCTGGGGAAGAACATGATAGGCCGAATGCCTGATTGCTCTGTGGCCC Gene GeneID:100336520|LOC100336520:XM_002697354:328_cdna Constitutive 0 NULL GeneID:100336520 23 GENE LOC100336520 NULL mediator of DNA damage checkpoint 1-like EMBV3_42168 GGAAGACAGTCTTTAGGAGAATGGACAGCTTTGTGGCCCCTTGATCTCAAAGTTGAAAGG Gene GeneID:519739|AGPAT9:XM_002688391:40_cdna Constitutive 2 NULL GeneID:519739 6 GENE AGPAT9 NULL 1-acylglycerol-3-phosphate O-acyltransferase 9 EMBV3_41442 CCTTAGCTAGCGGTAGATGGTGAGGTTTCCTGCCACAAAAACTTGAGTCCAGGTTAAGGC Gene GeneID:504634|MORC2:XM_002694638:20_cdna Constitutive 0 NULL GeneID:504634 17 GENE MORC2 NULL MORC family CW-type zinc finger 2 EMBV3_42178 GAGCAAGCGCTTCGGCGCCTACAACTACCGGTCCACATTGGCCAAATGTATTCAACCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26338 TGTTCATTGAGAAGGTCCTGGAGAACAACTACACAGCCCTGATGTCGGCCAAGTACTCCG Gene GeneID:533929|FGF18:NM_001076007:133_cdna Constitutive 0 NULL GeneID:533929 20 GENE FGF18 NULL fibroblast growth factor 18 EMBV3_36643 CCTGTTGACAAGTCTTCCAAATGAAGAATCTCAGTGCGTTCTGACTCATCAAATGCAGCC Gene BVT0102_190887 + 0 NULL GK000025.2:36729803-36741125 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145386 1 XLOC_088814 NonCoding TCONS_00145386 XLOC_088814 NonCoding NonCoding - 25:36738178-36739286 - TSS108962 1108 2 TCONS_00145386_2 55 0.0622743682310469 1 0 0.00223544984503833 0.00112645888125944 0.00181502936116158 0.00189123003139887 0.00192523990357934 0.000479159395062997 0.00103319261455229 0.00104146031503542 0.00143745521100929 0.000197315339485923 6.40477388339951e-05 0.000150809879413434 4.81067033517849e-05 0.000584193021923846 0.000201818373800528 0.000143014234065413 0 0 0.00236431135296004 0.000473451739104127 0.000261124687716054 0 0 0 0.0014940730293247 0.000780010376563396 0.0016528129741649 0 3.50512993750373e-05 5.06921632508777e-11 XR_226471.1 LOC101903853 PREDICTED: Bos taurus uncharacterized LOC101903853 (LOC101903853), 0.0 1994 100.00 0.996389891696751 0 noncoding 0 0 0 0 -0.0298600032780354 0.932698184452756 -0.0690302660536418 0.326893253844712 CAGCAACTCACCTTCTGACAGAGCTCATGGTTGCAAGGGAAGAAAAAGTCTTACTGAAAAATATTTAAAATGATTTAAGCAGTGATTCAGCAGCCAGGACAGGCACAGCAACGCCAGTCCCCTGCAAACATTCCTATCAACACGGGAAGGTTCAGCCGTGCAGAGGCCTCCACCTCTCCTGCCGGGACTGGCCTCAGCTGTGGTTCCATCCTGACCTGGGCCTGACTGACCGGAGCTGCTGCTTAGGAAGCCCCAGTCCTGCCTCTGCCAGCTCAGGGCTTACTGGCACAGAACCCTCCAGAGCTGCAGCTGTCAAGGGCGGTACCTGCAACTCAGGTGGTACAAAATATCCACTGGTGTCATGCAGGAAAAATGAAGATTTCTAAAGATAACTAATAAAAAGTTAAGTTCACTGTATTTTCAAGTGACCCTGGTGCCCTCACTTGGTTACACGTGCCATGGTTCACGGCTAACAAGGTCAGTGTCATAAGGTCAGAGAAGTAAACTCAGCTTGCGTGACCAACTGCAACTTAACGTGCTGCAGGATGTAGTGGGTTTTTTGTCCCAAACAGTGTGTTTCTCCCTCTAAGAACGCTGTTGTTTCAACTTGGAAATCACTTTCTCACCTGTTGACAAGTCTTCCAAATGAAGAATCTCAGTGCGTTCTGACTCATCAAATGCAGCCAAAGAAGCACTTGTTCCATTCGGATTTAAATGTTTGAAAGATAATCTTTTCAGTTAAGAAGTTCAGTTTATTTTGATAGTTTTAAACACACTTTCAACTAGAACTTCAGAAAATAAGCGGATTTTAAAAATGTTTCTCAAAATAGGGGCGGAGATAAGATGGTGAAGGACATGAGCTGACTTCCTCTCATAAAAACGCCAAAATCACAGTGAACTGCTGAACAACCACTGGCAAATGCCGGGACCTGCCGAGGAAAGATGCCCTACGTCCAAAGGCCAAGTGACCGCAGGAGCCGGCAGGAGCGGCACAAGCACAACAATGTTCTCTCATGTTTCTCACTTTGCTCTCAGTATAATGTTTCTTTTAGAGCAAAAAAGGGGTTTTTGTACTGTTAACCAATAAAATATTTTAAAACATTCCCTC TCONS_00147108 TCONS_00147106 TCONS_00147107 TCONS_00147109 TCONS_00147110 TCONS_00147111 r 3' 1837 TCONS_00147108 TCONS_00147106 TCONS_00147107 TCONS_00147109 TCONS_00147110 TCONS_00147111 r 3' 2944 EMBV3_10095 ATGACCAGAGTTACCACTGAAGAGAGCCAAGACAATGAGTGGAATCAGACCATGCGTGGG Gene GeneID:100295884|LOC100295884:XM_002690263:53_cdna Constitutive 0 NULL GeneID:100295884 9 GENE LOC100295884 NULL hypothetical protein LOC100295884 EMBV3_06541 TTGATGCAGGGACCAGTGATGCAGCGGGGTGAGGAGAAGCCGAGAATCAAAAAGGTCATT Gene BVV0102_275364 + 1 EMBV3_20268 GK000019.2:20978427-20993572 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099133 1 XLOC_059376 NonCoding TCONS_00099133 XLOC_059376 NonCoding NonCoding - 19:20986676-20987620 - TSS73509 944 1 TCONS_00099133_3 92 1 0 0 0 0 0 0 0 0 0 0 0 0.000152774030687213 3.78779394011112e-06 0 0 0.00152279297036789 0 0 0 0 7.61804518668689e-06 0 0 0 0 0 0 0 4.06999007911666e-05 0 1.91066598299744e-05 0 noncoding CCTGATGGCCTCTAGGGGCTGGGGAAGGGAGAGAGTTGGAGGGGGTCTATTTAAGAGATTTTTGGAATCTGTGCCTGCGCATCACCCGCTGCCATGAGTTATTTCAGCGCCGATGTTTGTCTCGAGCTGATTATTCCAGCCCGAGAACAGGTGGAGCAGCCTGCGGTGGCTTATTCGTCAGCCAAGGCCATCTGTTCCCAACAAGCTGAGATTTGTAGCTGATTTTTACTGGGGAGCAAGGAGTGGGGGCAGGGAGGGAGATGATCACCTCCGAGCCCCAGGAGACTTATCCCAGACCTTCTGCGAGGTCTGAACCCCCCAGTCCTCCCCTTCTAAAACCAATACCTGCTCGTTTTTCTCAGAGAACTCACCGGTCACTTGACTCTGAAATAGCGAAAATACTTTTTCCTTAAGGGGCTAAACCTTCTTCGATGGAGTCAGGTATGAGAAGCAGGAATCCATTAACCAGGCACAGTCTGGCCATTGAGTCATGTCCACCCTTACAGATTTTTTTTTTAATATGTAACTGTGACACAAATATCCTAAATGACCTTTTTGATTCTCGGCTTCTCCTCACCCCACTGCATCACTGGTCCCTGCATCAACACGTGTCTCCTTGTCTAAACCTGTCACCTGCAGGGCTTCAGGCAGCATGGGAGGCTATGTCTGGAGGCTCTTCTCACCCATCCCTCGCTGCGCCTCTTCCCTAAATACCCTGTTCAAGTTCCACCCTCCAATCTGTTCCTCTTCCAGCTTCCACTCGCAGCCATGCCAAGAGATGCCTGCTGCTTTAAGAATGGCTTTCCCTGAGCAAGGGAGCTAAGCGGTTTCTAAGCAGCTTTGCCACATGGTTTACCCTCCACAGCTACTATTTCTATCTATGCAGTGCTGGGAAAGACACTCCTCTTAGAGTCACACTAATATGACTAATTGGGGGCCTTCTT TCONS_00095650 TCONS_00095651 TCONS_00095652 TCONS_00095653 TCONS_00095654 TCONS_00095655 TCONS_00095656 TCONS_00095657 TCONS_00095658 TCONS_00095659 . 3' 5630 TCONS_00095650 TCONS_00095651 TCONS_00095652 TCONS_00095653 TCONS_00095654 TCONS_00095655 TCONS_00095656 TCONS_00095657 TCONS_00095658 TCONS_00095659 . 3' 6573 EMBV3_26283 TCTTCTCGGCGCCCTACCTCAGCTACTACGGAACGGTGCGCTACGGCGCGCTTGAGCTCT Gene GeneID:788463|GALR3:XM_002687931:160_cdna Constitutive 0 NULL GeneID:788463 5 GENE GALR3 NULL galanin receptor 3 EMBV3_11421 ACAATGGCCTCCTTGGGCTGTGGCTTTGTGGTTGGCTGTGGTCCAGTGTGTTGCTGTTAT Variant GeneID:505763|MPV17:NM_001045929:57_cdna 252^526 2 EMBV3_24780 GeneID:505763 11 GENE MPV17 MGC137578 MpV17 mitochondrial inner membrane protein EMBV3_12164 CTACTGGGATCTGGTCCAACAAGAATTTCACCACAGAGGACAGACTCGGCAAGAGCAAAC Gene GeneID:100296972|LOC100296972:XM_002687084:305_cdna Constitutive 0 NULL GeneID:100296972 4 GENE LOC100296972 NULL hypothetical protein LOC100296972 EMBV3_09257 GTCTGGAGGAAATATCAGACTGGGATGGGTTAGACGACTTGTCCCTAATTTTCGATGGGC Gene GeneID:783451|BEX4:NM_001110096:11_cdna Constitutive 0 NULL GeneID:783451 X GENE BEX4 MGC140151 brain expressed, X-linked 4 EMBV3_22699 TGCAATTTTAGGACAACATGTTCTATATAATTGTTTACTTGTTGTAGATGATACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_05122 CCAGGACCAAGGATGACTGTGTAGATGACAAACTACAGAACTCTTGTGTACCGTGGAACG Gene BVV0102_294928 + 0 NULL GK000030.2:1454581-1957142 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246081 TCONS_00246088 TCONS_00246082 TCONS_00246084 TCONS_00246089 TCONS_00246093 TCONS_00246087 TCONS_00246091 1 XLOC_150900 NonCoding TCONS_00246091 XLOC_150900 NonCoding NonCoding - X:1877291-1895659 - TSS184588 1267 3 TCONS_00246091_3 39 0.116022099447514 8 0.931453149670605 0.000306346442838987 0.000458014899368886 6.66746540641581e-05 0.000233292183087658 0.00029557463190572 4.45759274221351e-06 0.000522151337725776 0.000605216164421685 0.000119464630675591 3.92686595904112e-44 7.74512330912029e-27 0 9.12965024692335e-184 3.69620143399937e-95 0 0 0 0 0.000894188050189582 0.000313837386500274 7.06676583364834e-05 4.21036503447735e-23 0 0 0.000184564772912477 0.00128915001078377 0.000345493506885895 0 0 4.66415964253722e-20 XM_005194400.1 FAM217B PREDICTED: Bos taurus family with sequence similarity 217, member B (FAM217B), transcript variant X1, mRNA. 2e-48 197 89.26 0.11681136543015 0 noncoding 0 0 1 1 -1.88545430860891 0.0162159309358538 -1.10481477034415 0.000172523236326841 GAGGGGTTGGCAAGCCCTGTCCGGGGATTAGCAGTTCTCCCGAGGACGTCCTCTCTGGCCCGCCTGTGAGGTTTGCTCAGGAGAAGGCTGCCAGTCTAATAGAAGTCTCCTGGAAGTCACCTTCGAGAAAGAATGACAAATGCTACTGGAGGTGAGGGCTACCTGGGAGGGACTCTCTGACTGGCCTCAACTTGACTGTGTGACCTTGGACTGGAAACGCTCTCTAGTCCCCAACCATCAGTAAGAGGAGACTACCGGTATTCCAGGACCAAGGATGACTGTGTAGATGACAAACTACAGAACTCTTGTGTACCGTGGAACGTAACTACAGACTATGTTACTTGCTGTGAAGAAATAGCATATTGTGGTGATAAGGACCCATCTGAGACCTCTCAACACCAGATTACATAGACTTAAGGCCTCCTTGAATATGATATCTTAGAGATTCCAGATTAAGGTATGATGGGTACCAGTACAAGCCGGGATTGTTGAGAAGGCTCAGATACTTGGGAAACCAAGCTGATGGAGGATGGAAACTGATGAAGACTCTGCTGGAATGCATCACATCTTCCTAACTGCAGAATGGCTAGGTCTACTTTACAGAAAGGAGATTAGAAATTGGTGACCACTAAGAATATCTACAGACAGAGGGTGAGATGGTTGGATGGCATCGATGACTTGATGAACATGAGTTTGAGCAAGCTCTGGGAGTTGGTGATGGACAGGGAAACCTGGCATGCTGCAGTCCATGGGGTTGCAAAGAGCTGGACACTACTTACCAACTGAACTGAAGAATATCCCCACAGGAAGGGCTTAATAATTTTGGTAGTTTTTTTTCAGAGGCTTTTTTTCCCCCTGAAATTTCAGGTTTGCTGAGATTTGCAGAGATGGTTTGGCTGCATCTGCAGTTGGGTGATGGGTGAGGGTTAATAGAGTCTGTGTCTTATGGCAGAGATTTAAGTGTCCTGTTCAAGACCTGCTAATAGTGACCTTAGCACTCCCCCCCCCCAAAACAAAACACACATACACTCAAACATGTTCTGTTGGGCAGTCAGGAGGGCAGACAGACAGAGGGGTAACTCTGAGTTCTAACTGGAACTAACAGGTTTTGATGGATTGATTATTTGTGAAATGAATTTTAAAGAATTGGCTTTGAGTGATTTGATATACAGTAAATTAACTGAAAGCCTGAAATTGTTGACAAGCTCTTTTTGTGTTTCTTCATTTCCAGTTAAAAACATTAAATTCTAGTTTATGGGACTTCATT TCONS_00246095 TCONS_00246096 s 3' 97390 TCONS_00246095 TCONS_00246096 s 3' 79738 EMBV3_16414 CAGAGAGTTTTCTGGGCTGAGAGGAAAGCAAGTTTGCAGCTCTTTGGGAATCCGAGCTAC Gene GeneID:507654|ADAMTSL4:NM_001101061:70_cdna Constitutive 0 NULL GeneID:507654 3 GENE ADAMTSL4 NULL ADAMTS-like 4 EMBV3_04094 CCATTTGGAGACTCCTGGTCTTCCTGCCTGTTACTCTCTCAAAGGGAAAAGCAACAAGTA Gene BVT0102_184172 + 1 EMBV3_40643 GK000008.2:38735552-38822610 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36299 TTGTGGACTTATGACTGCGTCTTCCTGGGTCCTGGGTTCTACTGATGGTGTCATTGATGC Gene GeneID:514645|LOC514645:XM_002689102:34_cdna Constitutive 0 NULL GeneID:514645 7 GENE LOC514645 NULL similar to olfactory receptor, family 2, subfamily M, member 2 EMBV3_04704 CCTTTATGTGGGTTCCTATTTTGTCCTCTTTGAATTTCCTGGTTCCTGTCTTACTGAGAG Gene BVT0102_062583 + 0 NULL GK000001.2:75222154-75288094 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001246 TCONS_00001242 TCONS_00001245 1 XLOC_000288 Coding TCONS_00001242 XLOC_000288 Coding Coding MB21D2 1:75101171-75223943 = TSS611 3317 1 TCONS_00001242_4 491 0.0563762435936087 2 0.972998509419977 0.00114202528758386 0.000625314008500021 0.00112220557093985 0.000753884042347423 0.00124068632663795 0.000635927846186798 0.000416399010318335 0.000490534507003294 0.00250326449390649 0.000226482910294348 2.08060295360313e-05 7.07133890688238e-05 0.000124832291218853 0.000142536596053057 0.000134432890902027 0.00301822105407331 0.00019276639326328 4.50781561877379e-25 0.00196521258011357 0.00129635488704144 0.000393149790281767 0.000116797842999862 0.000974110770846409 0.000716502348143258 0.00103011275026178 0.000826588678818148 0.000640900799115634 0.000368134239590645 1.5310678524968e-05 0.000383440360980605 NM_001205856.1 MB21D2 Bos taurus Mab-21 domain containing 2 (MB21D2), mRNA. 0.0 2663 100.00 0.444678926741031 NM_178496.3 MB21D2 Homo sapiens Mab-21 domain containing 2 (MB21D2), mRNA. 0.0 3294 88.13 0.782634911064215 TCONS_00001242_4 sp|Q8IYB1|M21D2_HUMAN M21D2_HUMAN Protein MB21D2; 0.0 1025 99.80 0.9979633401222 1 coding 0 0 0 0 0.0329496554303227 0.842175618446941 0.00920373866523931 0.840052901045408 GCGGGGGTGGGTGCTGCCGCCGCCGCGGAGCTGCTACTCGGCGCGTTTTGTATGAAGATGGCGGCTCCCACCGCCAGCAAGGCAGCCTCCCTGGGCTGTAACAACAAGCCTGCGTTCCCGGAGCTGGATTTCAGGTCGGGAGCTCGGGTGGAGGAATTGAACAAACTCATCCAAGAATTTACGAAGCACGACCAGCGGGAATATGACGACCAGAGAGCACTGGAGATTCACACAGCTAAGGATTTCATCTTTTCCATGCTGGGAATGGTGCAAAAGCTGGACCAAAAACTGCCAGTGGCCAATGAGTACCTGCTGCTTTCTGGAGGAGTCCGAGAAGGTGTGGTAGACCTGGACTTAGATGAGCTTAATGTCTATGCCCGAGGGACGGACTATGATATGGACTTCACTCTCCTGGTGCCAGCCCTTAAGCTGCATGACCGTAATCAGCCTGTGACACTGGATATGCGCCACTCAGCCTTATGTCACTCTTGGCTGAGCCTTCGGCTCTTCGACGAGGGGACGATCAGTAAATGGAAAGACTGCTGCACCATTGTAGATCACATCAACGGTGCCACCAACTACTTTTTCTCTCCAACCAAAGTGGCTGACTGGTTCTATGACTCCATCAGCATCGTCCTCTCAGAGATACAGAAGAAACCCCAGAGAGGGATGCCAAAGGTGGAAAAAGTGGAAAAGAATGGGACCATCATCTCCATCATTCTGGGTGTGGGGAGCAGTCGCATGTTGTATGATATTGTCCCAGTGGTCTCCTTCAAAGGTTGGCCGGCAGTGGCCCAGAGCTGGCTCATGGAGAACCACTTTTGGGATGGGAAGATCACTGAGGAAGAAGTCATCAGTGGGTTTTACCTGGTGCCAGCTTGCTCCTACAAGGGAAAGAAAGACAATGAGTGGCGGCTGTCCTTTGCCAGGAGTGAGGTGCAGTTGAAGAAGTGTATCTCCAGCAGCCTCATGCAGGCCTACCAGGCCTGCAAAGCCATCATCATTAAACTCCTGTCCCGGCCCAAGGCTATCAGCCCCTACCACCTGCGGAGCATGATGCTCTGGGCCTGCGACAGACTTCCGGCCAACTACTTGGCCCAAGAAGACTATGCAGCCCACTTTTTGCTGGGCCTCATTGATGACCTGCAGCACTGTCTGGTCAACAAGATGTGTCCCAATTACTTCATCCCTCAGTGCAACATGCTGGAGCACCTGTCTGAGGAGACAGTCATGCTCCACGCGCGGAAGCTCTCCTCGGTCCGCTCAGACCCAGCAGAGCACTTGCGCACAGCCATCGAGCACGTCAAGGCAGCCAACCGGCTGACGCTGGAGCTCCAGAGGCGAGGGAGCACCACCAGCATCCCCTCCCCGCAGTCCGATGGAGGGGACCCCAACCAGCCTGATGACCGTCTGGCCAAAAAACTGCAGCAGCTAGTGACTGAGAATCCGGGGAAGTCCATCTCTGTCTTCATTAACCCTGATGATGTCACAAGGCCCCATTTCAGAATTGATGACAAATTTTTCTGAGCATTTTTGCTGCCTTTTTTTGTTTTGCTCTGGTTCTAAAACTCTCATAATACGTAGTGTGGTTTGTGATGCTGTCTTTCAGGGGTTTTTTTTGTTTGTTTTTTGTTTTTTTTTACATATCCAGCCTGGATTGGATCTGTTAAGAACACATCTTAAGTTTCCTGGTTCTGCAGGATGGTGCAGACTCTGAAACAGTATATTACTATTTCATATTCTGCCTCTGATTTTGCTGTTTACTTTTTGTAGTTATTGTTTTGTTTTGGTGTTTGTTTTTTTTTTAAGGAGAACTTGAGCCATAGATGAAATGCCCATGAATTATCTCCCTTCTTTCTGTTTTATACTTTGTGCAGAATTGCTGATGGGAGTGGGGAATCTCTCTTCCTGAAACTTCAGGATTCTATGTTTTATTTTGCTTTTCTTTGTGTTTATTTTTTTTTAATGAGTGTTCATCACTACAGATATTTGAAAATCATCTGAATCTGGAAACTACCTGGTACGTTAGCTGGATTTGTCGATACTTTTTTCGACCAGTGGCCAGGGTAATTTCTCCCTCTCTGCCAAACAGTGTAGACTTTGAAAGTGATAATGCTACAAATTATGTTTGGAGCAACTTCATTGAATGTAATTGTCCTCAAATCAGAACTTTGGATGGTTTGGAAGGGTGTCTTTGACAACTTTCCAAGTAGAATTAAGGTTTCCAAATGGTAGTTTTAGTGTGTGTAATTATTTGAAGCCTTATTTAAATCCTGTTAATGAACATACCATTACAATTGTTATTTGCACTAATGAAATCTTTGCCATTGTCGGAGTTCCAATGCGTGTGTTTCAGTATAAATTGACATCTACTGTTGAAATGCTGTCATTTCTTCATTTAGCTCATTCTCTTAATCAATAGAATGATTCTTTGTGTTTGTTTAGTTCTCCTTTATGTGGGTTCCTATTTTGTCCTCTTTGAATTTCCTGGTTCCTGTCTTACTGAGAGAAGTTTTTCAAGTTTTATACCTGCTGAGTGACTTTATCTGAAGCTGGGGAAAATGTATGATTGATAAAGTAGTTGTCTTTGTATGTATAGTTGATCCTTGAACAACACAGGTTTAAACTGCGTGGATTCACTTATATGCAGATTTTTTTTCACTAAATGTGTTAGTTGAATGTATGGGTTTGGAACCATGAATAGAAGGTCCACTATAAAGTTATATATGGATATTCAACCTCACAAGGTCAGTGTTCCTAACCCCCACATTATTCAAGGGTCAACCATATTTCTTTTGACATTATAGGGTTAAGCTTTTTTGTAGAGTCTCTTTGGTTCTTCTGAGAGTTTTGAGAAAAACTAGAAGGAAAAATGAATATTAATCCCCAAATAGAAGATACCATGCCAATTCAAAAGCAGATTTTGCCATAGAGCAGGAACCAGGAAATAACTGAGTGGAAGCCTTGGTGTAGAGGTGTCCTGTCTTTAAGAATGAAAGTACTTGCCAGGTTTAGGTGCTGCAAGGCACCGGTTCCTTGTTTTGGTATGGACTCATTTCAAACTGTAGTGTTTGGGAGGCCAGGGGCCTGCCCATCTCTCAAAGGATTACTGTGCTGTCTACTGTTGGAAAGGTCAAGCAACACTTTGATCTTGAATGTCCAGTCTCACGGGGTAGATTTTGGCCAATTGAAATCAGGCATATGCAGTCTTGGTTTTTGCATGGGAATTATTGTAATGCTTATGAATGAAAATGAAATCATTCAACCATCTTAAATCAAACAAAAGTAATAATAAAAGAAACATACTGGCCTTGGAG EMBV3_41588 GAAGAAGCACTCCAAGCAGCCATCAACAACAAGAGAGGATTTGGCTGACCTACCTCACAC Gene GeneID:514373|HERC5:NM_001101995:171_cdna Constitutive 0 NULL GeneID:514373 6 GENE HERC5 MGC151596 hect domain and RLD 5 EMBV3_03027 ATGTTTGCCATGAGTATTAGCTTACCCGATGGGACCGTGCCCCCACCACCATCACACACA Gene GeneID:533039|SRF:XM_002697251:457_cdna Constitutive 0 NULL GeneID:533039 23 GENE SRF NULL serum response factor (c-fos serum response element-binding transcription factor) EMBV3_36234 ATCCTCTTGGAGCATCTGGCTGTCGGATTCTTGTCACCCTGTTACACACACTGGAGCGCA Gene GeneID:512044|ACAT2:NM_001075549:14_cdna Constitutive 1 NULL GeneID:512044 9 GENE ACAT2 MGC140551 acetyl-Coenzyme A acetyltransferase 2 EMBV3_38979 GGGGTCACCTCAGCAAACTTTTACCCTGAAACTTGGGTTTATATGCATCCTTCTCAGGAC Gene GeneID:540975|TIPARP:XM_002684964:241_cdna UTR3_Alt 2 NULL GeneID:540975 1 GENE TIPARP NULL TCDD-inducible poly(ADP-ribose) polymerase EMBV3_21145 TTTGGTCGACGAACTAAGTGGAATGCAACTGCGAGCAACTCCGTCCCTCCGGGACCTGCT Gene GeneID:100337372|LOC100337372:XM_002694060:170_cdna Constitutive 0 NULL GeneID:100337372 16 GENE LOC100337372 NULL leucine zipper and CTNNBIP1 domain containing-like EMBV3_27091 GACCAGGATACCAGGAGCTGATGGAGTGAACTCAGATGAAAAGAAAGTACGTAGGAGGGG Gene BVV0102_350712 + 1 EMBV3_36263 GK000006.2:71917432-72122498 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209358 1 XLOC_127869 NonCoding TCONS_00209358 XLOC_127869 NonCoding NonCoding - 6:72026351-72027693 - TSS156865 1342 2 TCONS_00209358_1 75 1 0 0.000111522176719711 0.000599012390489461 0 0 0 2.66546471824035e-06 0 0 0 0 0 0 0 0 0 0 0 0 0.000122899643047632 0 0 0 0 0 0 0.000377997876416281 0 0 0 0 0 noncoding 0 0 0 0 0.0388488348750722 0.798552214024756 0.00244575026779496 0.977468039982994 GGGAGAGGGCAGGGCCTGCAAGCAGCCTGCAAAGGTGACCAGGATACCAGGAGCTGATGGAGTGAACTCAGATGAAAAGAAAGTACGTAGGAGGGGTCGCAGAATGTCTCCTTGCCAGTGAAGCAGCTCCTCGAGCAAGGGCGCTGAAGGCCCTGGAGTGGGACTCGTGAATCTGCTTCTGAACAAAATCCCAAGCTGATTCCAAGGCAGGTGGTGCCCTGAGCCACATTTTGACTGATGAGACTGATGTTTTATAGGACAGACCTGTGTGTCCTGTGGACATAGGAAAATACATTTTTCAATCTTCAAATGTTTTGGTAAGCTCTTCCAGGTCACTGTATCTTCTTCTCAGGCACAATGGCAGGGAAAGAAAGAAGGGAAAGAAGGAAGAAAGAGTACCTCTGTGGGGCAGGGAGTCCTGTCCTAATGGGGTCGCGTGCCAGCCATCCGAGAGAGCGGAACTCCGTGCTTGAACTCAACCAGAGTCGACTATGGAAACTTTTGTGGGCAGAGTGTTTGCACGCCTGCCAGCTCACACACTCCCACGCAGATCTGCCCTTGGTCTTGCTGACTGTGAATCTGTGAAATGAAGATTAGTGGTACAGGGACTGATCTTCTGCCTTAGGGTCTTGTCCTTACATTATTACTAAGCCTGCCCCATGAGTTGTGATCTCTGTGTTCCTGAAACTGGGGTCTGACTAATTGTTAGGAATCCTAACATTTTTCCTTTGGAGTTTTGTTTTCATGATCATCTGAAGCAAAAGTTTTACAAGTTATAAAAATAACACTTTTCTTTTGGAGTAATGATTCTCATTTGAAAGTTTTCTTCCACAGAATCAAACTTGACTTTTTTTTAAAGTCAGTGTTTCTCCAGTGATGGTCTCCAGAAATATTAGGAGACCTTCAAATACATTCTCTGGGATCTATATGAATGGCCTTTTCTTTTTTCCATTAAAAGTGAAAACTACCATTTTTGAGAGTTGCAATGGAACAGTAGTTTTAAATATAGGATCTAGAAATGAAATTTTCCTTGGCTTATAATGACGTTAGGTGGAAAATCTCCAAGGTTGAAATACATCATGTGCCAATTCATTTGAATTCAGTTCAATTCAACAACTATTTATTAAGCTGTGGTCCTAATGCTATGGTCGGCACAAGGGAATAGAGTGCACTGAAGTTCCTGATGTACTTGGAAGAGAATTATTGTCCAAGAAGCAATGGGAACATTCTCTCTGGAGGAATCAGGAAGAGCTTCTTAGAAGGATGAATTCACCATTATGACTTGCAAAGAGGGAAAAAGAAAGGGGAAGAGAAAGAGAAAGGTAGACTGAATATGACAGAT TCONS_00203522 TCONS_00203523 TCONS_00203524 TCONS_00203525 TCONS_00203527 TCONS_00203528 TCONS_00203529 TCONS_00203530 TCONS_00203531 TCONS_00203532 . 3' 108187 TCONS_00203522 TCONS_00203523 TCONS_00203524 TCONS_00203525 TCONS_00203527 TCONS_00203528 TCONS_00203529 TCONS_00203530 TCONS_00203531 TCONS_00203532 . 3' 109528 EMBV3_30645 GTGCCACCATCATCAATACCCACTTCCAGAATTTTTCATCATCCTAAACTGAAAGTCTGC Gene BVV0101_073125 + 0 NULL GK000017.2:64480201-64491713 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20236 CTGTCCGAGCCGGCTGTGGTACAGAAAAGAGCCTTGGTGACAGCCGCCCATGGGCAGTGG Variant GeneID:508216|MRPL28:NM_001045996:96_cdna 786^855 3 EMBV3_28004 GeneID:508216 25 GENE MRPL28 MGC126950 mitochondrial ribosomal protein L28 EMBV3_14333 GTGGAGGGCCTACATGACGTCATGACTGAAGATCCTGAAACGGGAACTTACAAAGACTGT Gene GeneID:538236|IPO11:XM_002696305:21_cdna UTR3_Alt 2 NULL GeneID:538236 20 GENE IPO11 NULL importin 11 EMBV3_13960 CCGGGACCCACTCACCCCATTTTATTTAGCACAGTAGTGAAGAGCTTACCTCATCTTGGG Gene BVV0102_422449 - 1 EMBV3_41991 GK000018.2:48326745-48337458 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090591 1 XLOC_055371 NonCoding TCONS_00090591 XLOC_055371 NonCoding NonCoding - 18:48332314-48334730 - TSS67937 2416 4 TCONS_00090591_4 70 0.459023178807947 1 0 0 0 0 0 0 0 0 0 0 0 9.47508789085668e-07 0 1.18761618745914e-06 3.11523272398629e-05 0 0.000634054428974427 0 0.00027001781970725 0 0 0 0.000132073100622744 0 0.000215109161461757 0 0 0 3.97565198365174e-06 8.03742624030869e-06 0 NM_205808.1 KCNRG Bos taurus potassium channel regulator (KCNRG), mRNA. 3e-25 122 71.37 0.0951986754966887 NM_020459.1 PAIP2B Homo sapiens poly(A) binding protein interacting protein 2B (PAIP2B), mRNA. 2e-07 62.6 71.63 0.0554635761589404 0 noncoding 0 0 0 0 0.0545902749079023 0.771355895791164 -0.00662765355651993 0.907569814816529 GAGATCGCAGGCCAGCTGGGAACTGTGTCCTACAAAGGAGAAGGCATTGCTAATACCCTTAGGACCAAGTCATTTTAGGCGAAAACAATGAGGAAACAAGCAGGGGAGAGCGGTACCGTAGGATGCCAGGAGCAGGCAGGGCCTGGGGAGGACAGGCATAAGCTACCGTCTCTGCTTCTGTTAGCCATGGAAGATGAGAAGTGAATGACGGGGAACTCTCCCTCCAAAGAGCAGGTGGACGTGGTCTTGTCTCAGAAGCCCACACCTGTGTTTTTCATCCAAGCCTTTACATCCACCTTCCCAGCTTAAATCTCATCTCCCATTTGTAATCCCTCCAGAGTAGACGAGTAAGGGTCTCTCACAGCCCATTGATAGATGGGCTCCTTATCCCATTTCTCTTTCTTCCTTTCAGTAATAAAAGTCCCCAGATTTTAGCAGGGACGTGGCTGCCCAGCGCGAACTCTTATTTCCCTCTCTTGCAGTTGAATGTGACCAGGTGAATAAATTCAGACTGAAGGGGTGTGTGATGCCTCCAGGTCATCGGGTCTAAAAGGAAGTGGTGAGACTTCCCTGGCAGTCCAGTGGTTAAGACTCTGTGCTTCCACCGCATGGGGTGCAGGTTGCAATCCCTGTTCAGGGGACTAATGCTGTGTGCCAAGTGACACAGCCAAAGAAAAAGTCACAACGTGTTTAATGTATGTGTGAATGGCCATTTGAGATTAGCCAAATTCCTACAGAAAAGAAAAAAGGAAGCGGCGTGCCCTCCACTTTCCTTCCCTTCCTGGGAAGCAGATGGTGGGTACCAGCCTCCCCAGGGGCCTGGGGGCGGCAGCCTGGAGGGATGCAGAGCACCCAGACAGGGAACCTCGTTCCTGGATGACCTCACAGAGCCACCCATCACCTGCTCTGGACTCCCACCAGCTCAGGCTCTTGCTGGAGAGAAAAGTGAAGCTCTCTCGTCAAGCCTCTGTCTTCAAAGTCCCTGTGAAAGCTGCCACATCCTAAATGTATTGTGATGAAGCGAACAGGTGGGGGTCTGGAGGCCCAGTCCAAGGTCTCCCGGGACCCACTCACCCCATTTTATTTAGCACAGTAGTGAAGAGCTTACCTCATCTTGGGTCTGGAAGGTCTCACACTGCTGCCCCACTCCCTACTAGCCCAGTGTCCTACAGTTCCTTTTAGGGCTCAATTACATATACTGTGGGGATTGTGTTATCAGTTTCATAATGAATCATCAGACTGTGTGTAAGGATCACAGTTAAAACTAACATTTATGACTTCCTTCGTGGTGAAGTGGTTAGGAATCGACCTGATAATGCAGGGGATGGAGGTTTGATCCCTGGTCCCGGAAGATTCCACAAGACAAGGAGCAACTCCACAAAGCCCGTGCTCTGCAACAAGAGAAGCCACCGCCACAAGAAGCCCAAGCACCTCAACCAAGAGTAGCCCCCACTCGCCACAACTAGAGAAAGCAACAAAGACCCAGTGTAGCCAAAAAAAAACAAACCACACCCAAAGAAGCCACCAACATTTATCAAATATCTGTTTACCTTGTCCCAGACAGGCTCCGTGCAAAACCATTTGCCTTGTGAGGTAAGTTCCATTTGACAGCGGAGGCCAATGAGGGCCAGTGACTGACCAAATGGTCCACAGAGCAGTAAGGGGTAGAGCGAAGATACACTGAGCTCACAGCCACTCTAGGCTTGCTCAGACCTGCGGACACCACACTGCCCAGCAGCAGGTCGCCTAATTGACCAAATGATAGGGAGCACTGACTCTGAGTCACACCGTTTGGCACTGAGCAATGAAACCCCCACCCTCTTGAAACTTCTGTTCTGCCGGGAGAGACAGACACTGCCTCTCATATCCTGCATGTGGTTGTCGGCAAAGCCACAATCTCCATTCACCTCCTCTTCTCACTCAAAGACCAAATATCTTTGATTACAAGACATTTCCCTCACACAGCCCCCCTGCCCCGGCTGTCATCTGTCCTCATCTCCCACCTCTTTCCCTCCAGCTCTGCAGGCTCACAGGCCTCAGGGCCTTTGCACTGGCCATTCCTTCTGCCTAGATATGCTTCCCTGTGCTTGCGTGGCTTATTTTCTGACCTTCAGATCTTAACAAAAAATACTTCAGTGTGGCTTTCCTGGTAACTCATCTGAAATCCAGTGCCTCCCAAACATACTATGTACTTATTACCTAATTCCCTTTCTTACTGTATTTCTCCTAATACATATTACTTGAAAAAAATCAAGCTGTTACCGGTTACATAAAACCCATTTCAAATATCCAAGGATTTTTAGTAATTTTACCAAGTGGTGCAACTATCACTATAGATCTGTTTTAGAACATTTTCATCGCCTTCACGGAGTAAGATCCCTCATGGCCAATTTAGAGCTAATCACCATTCCCACAC TCONS_00083649 . 5' 2096 TCONS_00083649 . 5' 2096 EMBV3_16978 CCCTGCGGCCCCGGCCCTCCCGCCGCGATTCAGGCGTAATGGTTATGAAAGCTTCTGTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07500 AGAAAAGGTCTTCGTCAACCTGTGCAACATCTTCCCGCCGGACCTGGTGAGACTTGTCAT Gene GeneID:512586|ZC3H12C:XM_002692971:29_cdna Constitutive 0 NULL GeneID:512586 15 GENE ZC3H12C NULL zinc finger CCCH-type containing 12C EMBV3_02713 CTGTGACCCGTCCTGTGACCCATATTTAGCCGTGTTTGGGACTCCGTGTCTTCAATGGTT Gene GeneID:614936|ILF3:XM_002688867:233_cdna Constitutive 0 NULL GeneID:614936 7 GENE ILF3 NULL interleukin enhancer binding factor 3, 90kDa EMBV3_34508 CCACCAACGCAATGCCAGCGACCTTCTTGACATAGGATATATGGGCTCAAGTAGTCAAGG Gene GeneID:534842|ROBO2:XM_002684652:9_cdna UTR3_Alt 2 NULL GeneID:534842 1 GENE ROBO2 NULL roundabout, axon guidance receptor, homolog 2 (Drosophila) EMBV3_22304 CGCTCCTGCTGCTCGTGTATAAAAGTCAGGTTTTCACTTATCCTCACAGTTGCCTGGTCC Gene GeneID:613612|TMEM80:NM_001080312:13_cdna Constitutive 0 NULL GeneID:613612 29 GENE TMEM80 MGC148372 transmembrane protein 80 EMBV3_27812 AACTGAGAACTTAATCTTCCAAAATGTCAAGCGTCCTCTGGTATCACGATTCCAAAACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20791 GTGGCACTGGCTGGCACACGAGGTTAGATACTGGCTGAGCTATTCATGCTGTACGAACTT Gene GeneID:347699|OAS1:NM_178108:39_cdna Constitutive 0 NULL GeneID:347699 17 GENE OAS1 NULL 2',5'-oligoadenylate synthetase 1, 40/46kDa EMBV3_21216 GATCAGGGATCAAACCTGGGCCCCCTGCCTTGGGAGTGTGGAATCTTAGCCACTGGACCA Gene BVV0102_082783 - 1 EMBV3_31914 GK000015.2:54618045-54686090 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065106 TCONS_00220903 2 XLOC_039828 XLOC_134220 NonCoding TCONS_00220903 XLOC_134220 NonCoding NonCoding - 7:47218693-47219255 - TSS164901 562 0.651245551601424 1 0 0 0 0 0 0 0 0 0 0 7.3211606789941e-06 0 0 5.61605106221095e-05 0 0 0 0.000649910358976239 0 0 0 0 0 6.52956809699439e-05 0 0 0 0 0 9.59788456852913e-05 0.000331636051948379 XR_229992.1 LOC101908939 PREDICTED: Bos taurus kelch repeat and BTB domain-containing protein 11-like (LOC101908939), misc_RNA. 1e-73 280 94.94 0.314946619217082 0 noncoding CCAATCATGTTTCAAAGAACTGGAGTCGAAACAGAGCATAACAGTACTGCTTACTGAGCTGAAGAGGCAGAGATCAGACTTTAGAGCAGCTAAGGCAACTATAATCTGAGAGGTAGGTCACTGAAAAGACGAGAGCTGTGGAACTTCCCTGGTGGTCCAGTGGCTAAGATCCCACACTCCCAATGCAGGGGGCCCAGGTTCGATCCCTGGTCAGGGAACTAGAGCCCACATGCTGTAACTAAGAGTTCCCACGCCATAACAAAAAGAGCTCACATGTCACAACTAAGATCCCACGAGCTGCAACTAAAAGCCAGCACAGACAAATAAATACATAAATATTTTTAAATAAATAACTTTATTCCTTGAGGAACTAGAAAAAGAAAAGCTGCTGCTGCTAAGTTGCTTCAGCCGTGTCCAACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATACATGAAAGTGAAAAGTGAAAGTGAAGTCGCTTAGTCGTGCCTGAC TCONS_00216909 . 3' 12666 TCONS_00216909 . 3' 13227 EMBV3_24698 GGTTACATTGCTAATCACAGTACAGGTACATCAAAAATGTGGGATGACTCAGGGGCTCAG Gene GeneID:531659|C1QTNF3:NM_001101138:45_cdna Constitutive 2 NULL GeneID:531659 20 GENE C1QTNF3 NULL C1q and tumor necrosis factor related protein 3 EMBV3_06426 TTGAAAGCACTAATTAATTGAATGTTTGTTGCTGTTTGTTTTCTTTGATGACATTCCCAA Gene GeneID:512781|ARL13B:XM_002684668:14_cdna Constitutive 3 NULL GeneID:512781 1 GENE ARL13B NULL ADP-ribosylation factor-like 13B EMBV3_12762 TACTCAAGCTTGATTGTGTAAAACTGCTTAGAAACCTGAAATTTTATAGTGTGTACTATC Gene BVT0102_376110 + 1 EMBV3_21025 GK000017.2:38027762-38045520 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075253 TCONS_00075255 TCONS_00075249 TCONS_00075251 TCONS_00075254 TCONS_00075252 TCONS_00075250 1 XLOC_046527 Coding TCONS_00075252 XLOC_046527 Coding Coding FSTL5 17:37540791-38029373 j TSS56789 4058 1 TCONS_00075252_5 717 0.0204534253326762 13 0.991720922426374 0.00058152488934506 9.62587172726551e-05 0.000438774069751016 0.000473188165404045 8.25839802238822e-05 3.76538337395572e-46 2.24024006604184e-05 0.000295474848459612 0.00117660766672874 2.29789986126935e-05 8.91660260157831e-18 2.63622913879856e-05 8.48872739978984e-14 9.39699746356136e-05 4.59122364351415e-05 0 0 3.53996456866551e-25 0.000146162588465959 0.000744652966581601 7.45495222687648e-05 0 0 1.64417648647518e-15 0.000485485493951228 0.000243778535513427 3.15749417570445e-05 3.08237554801178e-19 8.79474637587561e-06 0 XM_005217626.1 FSTL5 PREDICTED: Bos taurus follistatin-like 5 (FSTL5), transcript 0.0 7166 100.00 0.978807294233613 NM_020116.4 FSTL5 Homo sapiens follistatin-like 5 (FSTL5), transcript variant 1, 0.0 4621 86.07 0.978807294233613 TCONS_00075252_5 sp|Q8N475|FSTL5_HUMAN FSTL5_HUMAN Follistatin-related protein 5; 0.0 1409 94.25 0.99302649930265 5 coding 0 0 0 0 -0.197316739067607 0.321408172766112 -0.047641549461858 0.392706675735531 ATCAGAGCAGGTCACCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGGATCGAACTCTCATCTCTTATGTCTCCTGCATTGGCAGGAGATAACTGCAAGGCCATTGAATACAGCAAGATGAAAAGTATGCTTTTAGATTTACAAAATCAAAAATACATTACACAAGACAATGAAAACCCTAATGGTGATGACGTATTTCGGAAGAAGTTGCTGGTGGATCAAATGTTTAAATATTTTGATGCCGACAGTAATGGACTTGTAGATATTAATGAACTAATCCAGGTGATAAAACAGGAAGAACTTGGCAAGGACCTTTCTGATTGTACTTTGTATGATCTACTGAAATATGATGATTTTAACTCAGACAAGCACCTGGCTCTTGAAGAATTTTATAGAACATTCCAGGTTATCCAGTTGAGTCTGCCTGAAGATCAGAAACTAAGCGTCACAGCAGCAACGGTGGGGCAGAGTACCGTTCTGAGCTGCGCCATTCAGGGAGCACTGAGACCCCCCATCATTTGGAAGAGGAACAATATTATTCTGAACAACTTAGATTTAGAAGACATCAATGACTTTGGAGATGATGGGTCCTTGTATATAACCAAAGTCACCACAACTCACATGGGGAATTACACCTGCTATGCAGAGGGCTATGAAAACATCTATCAGACTCACATCTTCCAAGTGAATGTTCCTCCAGTAATCCGGGTGTATCCAGAGAGTCAAGCCCGAGAACCTGGAGTTACTGCAAGTCTCAGGTGCCATGCAGAAGGCATACCAAATCCTCAGCTTAGCTGGCTGAAGAATGGAATTGATATTACACCAAAACTGTCCAAGCAACTCACACTTCAAGCAAATGGCAGTGAGGTTCATATTAGCAATGTGCGCTATGAAGATACAGGAGCATACACTTGTATCGCAAAAAATGAAGCAGGAGTGGATGAAGACATCTCTTCTCTTTTTGTGGAAGATTCTGCTAGAAAGACCCTAGCTAACATATTATGGAGAGAAGAAGGTCTGGGAATTGGGAACATGTTCTATGTTTTTTATGAAGATGGAATCAAAGTGATACAACCCATAGAATGTGAATTTCAGAGGCACATTAAGCCGAGTGAAAAGCTCCTTGGATTTCAGGATGAAGTCTGTCCCAAAGCTGAAGGTGATGAAATCCAGAGGTGTGTGTGGGCCTCAGCTGTCAATGTCAAGGACAAGTTCATCTACGTCGCACAGCCAACTTTGGATAGAGTCCTTGTTGTTGACGTGCAGTCTCAAAAAGTTGTTCAGGCAGTAAGCACAGACCCCGTCCCAGTTAAATTACACTATGACAAATCTCATGACCAGGTCTGGGTGCTCAGCTGGGGTACAATGGAAAAGACTTCTCCAACACTGCAGGTGATAACCCTGGCCAGTGGGAATGTACCACACCACACCATCCACACCCAGCCTGTGGGGAAGCAGTTTGACAGGGTGGACGATTTCTTCATTCCCACCACCACACTCCTCATCACCCACATAAGGTTTGGATTTATTCTTCATAAAGATGAAGCTGCACTACAAAAGATTGATCTTGAAACCATGTCATACATCAAGACTATTAATTTGAAGGACTATCAATGCATCCCGCAGTCACTAGCATACACACACTTGGGAGGATATTACTTCATTGGCTGCAAACCCGACAGCACTGGGGCAGCTCCCCCACAGCTCTTGGTGGACGGTGTCACCGACTCAGTCATTGGGTTCAACAGTGACGTGACGGGCACTCCATACGTCTCTCCAGATGGACACTATCTTGTCACCATCAGTGACGTGAAAGGTCTTGTGAGGGTCCAGTACATCACCATCAGAGGAGAAATACAGGAGGCTTTTGATATTCACACTAATCTGCACATATCTGACCTGGCCTTTCAGCCATCCTTTACGGAAGCCCATCAGTACAACATTTATGGTAGTTCAAGCACACAGACAGATGTGCTCTTTGTGGAGCTTGCCTCCGGGAAGGTTAAGATGATAAAAAGCCTTAAGGAACCACTCAAGGCAGAAGAATGGCCTTGGAACCTGAAGAACAGACAAATCCAGGACAGTGGCTTGTTTGGTCAATACCTGATGACTCCTTCCAAGGACTCTCTCTTTATACTTGATGGACGACTCAATAAATTAAACTGTGAGATCACTGAAGTTGAGAAGGGAAACACAGTCATCTGGGTTGGAGAAGCCTAGAAGCCCTGTTAAATAATTATTAAATCAAGAGTTTTCCAATACACTGCACTAATCCATTATTTAAATTTACAGTTTAACTTTCTAAGTTTGTATCCTAGCCAAACATCAGTTATTTGGATGGCCCAAATAAAATAGTTTTTTTTTTTTTAAACAAAGACATACACAATTATTAATATTGGTTGATTAGAAATAGTTAACACAGTATTTAATGAGAAACTATTTAAATTATAAGAACCAAATCAACTGTTATGTTTTTTTCCAATAGAATAGGAATTTAAATAATTAAAAATAACTCAACTGCAGGGAATTTCCAATGAATTCTAAACACCATTTCATCTTGAGGGTTATTAGTCTATTTTTTTTTCTGTCCTTTTAGTATGCTTAAACCAGAAATAAAAGATGTTGTAGAACCTTAAAATTCTTAATTCAAAATATTCTGTCCCATCCACTGTTTCTAATCTTTCGTGCCTTGAAAGGAATGTCACAAGAGGAAAAGGAAGGCTAAAAGCTGCATACGGACCACTCTCATCACTATAAATTTCTTGTCATTTAAAGAGAAAAGTTGAACATCTTTTGCACCAAACCCAGCCTTCAGTCATTTGTCTAACCCTCAATGAAATATCATTTGAAGACATAAACTGTCCTTAGGCTGTACACAGGTGACAAATTCTATTTGACACTCACTGTATAATCTGCAGCATGCTATGGAAAATGGGGAGGAAGGGAGGAAAATAATTATGGTAATATGTTTGCAGTGTATTCGTGACTCATTTTGCTTTCAATCACGAGAGTGCATTATATTTTTAATGCAAGTTTGTCTGGGATGTCAACTGCTTACAAATATCTCTTATTAGTGGAATAGACTTTTTTGTTTCTTATGATGTAGTCCAGTGTTGCATTAGCAGGAACTTTTATTTCCAAAATAGAAGCATTATTTGTGTCTGCTTAGAGTAAACCACATTTAGGGAAATTAACAACAGAGAGAAAAAAAACTGACTAGAGAACTGATGAGTATTAGCGGTTTAGGACAATTAGTAACAGAAATTGGGAATTAGGGGGTAGCACCACAGTGGTGAGAAAAGATGTACTTCTCTATCGCCTTTGCTATTTAAATATAATCCATCAAAGGACTCATTCCTTAATAACTTTCCCAAATGACTTCTGCTTAACTCCTATGTAATCCTTAAACAACTCTCTCACTGTGTGTCAAAGTTCAAAACCTAACTAATCCTCTTATTTGAGACACTGCATAGAAGTAAAAATCATTGCTTTCATTTTCCAGGGCAAATAAAAGGCCAGTAGAAGTGCATTAAAACTAGTAACTTGGTTTATTGAAATAAGCAGATTATTATCCAGGCTTAAAGTAAAAGCTTACGTTGTTTGGAGAATCTTTTTACTTATTATATTTTTGTTTTATTGTTGCTAAAAATGCTAATGTACTGTTGAAATGACCTCCATTTCCTGAAGGTAATCCAATAATGTCTTTTTTAAATACAAATTTTACTCAAGCTTAATTGTGTAAAACTGCTTAGAAACCTGAAATTTTATAGTGTGTACTATCTTATGTATATATAGCATCCTGAACTATGTGATAACAGTAGATTTATTCTTAGCTTAAGGAAACATTATGGGAGGCAGATTTAATGGACAACAGAAGTTAGCTTATGTTTCTACTTACCTGCTTTCCTTTTTAGCAATTTTCTTCTTTGTGAACATGAACCACATAAAGTGGCTGTGACCTAATGATTTAACCTAAGTCTGTCTCATACACCCTTCTTTGGTAGCTGACACCATGTGGCTGCTTTGTCTGTAGACACTGCTTGATAAAAGAGAATA EMBV3_02264 GTTTTCCCTCCCCAGTCACAGAGCAAAGGCGAAAGTGCTGAGGTCTCTGTATATCAGGAG Gene BVT0102_091629 - 1 EMBV3_18240 GK000013.2:54931311-54936106 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045598 TCONS_00045599 TCONS_00045600 TCONS_00045602 TCONS_00045601 1 XLOC_026480 Coding TCONS_00045599 XLOC_026480 Coding Coding C13H20orf11 13:54934402-54942163 j TSS33242 3098 1 TCONS_00045599_1 228 5 0.601417525773196 0.00186758040015094 0.0023403961613078 0.00308629777773843 0.00158106939589067 0.00037172715658747 0.000548315530412624 0.0014493945054053 0.00170957447592371 0.00285670183518094 0.000428665177541545 0.0001652114076133 4.41001659770739e-08 4.40895547199662e-09 0.000446940610326653 0.000273556262509343 0.000474920922095147 8.73067887039543e-05 0.000625558075186807 0.00127222403253572 0.000118490894705519 0.0003339550525636 0.000499909616250755 0.000733927392672338 0.000544214166433919 0.00236443604067295 0.00146189540156176 0.000225222066929896 0.000241386144927501 6.30297802275114e-09 0.000524730280455097 XM_005214556.1 GID8 PREDICTED: Bos taurus GID complex subunit 8 homolog (S. cerevisiae) (GID8), transcript variant X1, mRNA. 0.0 5579 100.00 0.998063266623628 NM_017896.2 GID8 Homo sapiens GID complex subunit 8 (GID8), mRNA. 0.0 955 83.19 0.290187217559716 TCONS_00045599_1 sp|Q32L52|GID8_BOVIN GID8_BOVIN Glucose-induced degradation protein 8 homolog; 2e-167 466 100.00 0.995614035087719 2 coding 1 1 1 1 0.108692010499841 0.553034018500088 -0.0289903954485671 0.552777026385724 CGGCCGGGAGGCGGAGGGCCGGACTCTGGGGTCGTGGCCAGGAGGGATCGAGGCGGGCCGAAGTAAATCAGAATGAGTTACACAGAAAAACCCGATGAAATCACAAAGGATGAGTGGATGGAAAAGCTCAATAACTTACATGTCCAACGAGCAGACATGAACCGTCTCATCATGAACTACTTGGTCACAGAGGGCTTTAAGGAGGCAGCGGAAAAGTTTCGAATGGAATCTGGGATTGAACCCAGCGTTGATCTAGAAACACTTGACGAGCGAATCAAAATCCGTGAGATGATACTGAAAGGCCAGATTCAGGAGGCCATTGCGCTCATCAACAGCCTCCACCCAGAGCTGCTGGATACAAACCGCTATCTCTACTTCCATCTGCAACAACAACACCTGATCGAGCTGATCCGCCAGCGGGAGACGGAGGCAGCGCTGGAGTTTGCACAGACCCAGCTGGCTGAGCAGGGTGAGGAAAGCCGCGAGTGTCTCACCGAGATGGAACGCACACTGGCCCTGCTGGCCTTTGACAACCCCGAGGACTCACCCTTTGGAGACCTGCTCAACATGATGCAGAGGCAGAAGGTGTGGAGTGAAGTGAACCAAGCTGTCCTGGATTATGAGAATCGTGAGTCAACACCCAAGCTGGCAAAGTTGCTGAAACTACTCCTTTGGGCTCAGAATGAGCTGGACCAGAAGAAAGTAAAATACCCCAAAATGACAGACCTCAGCAAAGGCGTGATTGAGGAGCCCAAGTAGTCTGTGCGGGGCCCCGCCGCATGGCCCCGGGCCCGCGGGCGCCACCTGGGACTGAAGATTTTTACGGCAGCAGAGAACTCTCTTCTCCCTTCTTTTACTGTTTGTGTGTTTTGTTTTGTTTTTGACCCAGCATCATTTTGAAAGGGAAAAGTGGCCCTTTTAAGCACTGGAAAACTCCCAGTGCAAGATACCGTCTCTTCTGGAAGGCCGGCAAGGACTGCCCCATGGCCTGTGCTCAGCGTTCTGGGCGCTTCAGCTCCTGAAGGCGCCTCATCTTAGGGCCGCTAGTCCACTCGAGGCCCCGCTCAGAGCACGGGGCAGCACTGATGACCGTCTCACTCTGTCAGCATCCAGGAGGACAGCGTGTCCTCCTCCCCCCATCTCGGCCGGCCTTCGTGTAGAAGTGTTTTCTTTCCCTCTTTGGTTTTTGGTTTGTTTTGGTTTTTTCATAGGAAAGACTATATGAATTTGTAAATCCCAGTTCAAAGACTTCTTTTGTGCGCGGGCACTAAGTTTGGTTGTCTTCCTGTTTGGTCTGGGTCGTGTGGCTTTGGGGGAGATGGGTGTGTGCGTGTGTGTATGCGGGGCGGGCTGTGTGTTTTTTAATTTTTTAAATATATATTTTGGTGCTGTAAGTGGTGAGAGACTCTTTCCTAGTGGATCAATGAACCATCTCTCCTGGGCACTTTTGTTGAAAATAAAGGTTTCTCCTTAATTTCAAGAATGACCACAGTGGTCTCTCAGAAGTATTCATCATCTCAAGCACAACTTTTGCTTTTGGAGTGGCTTCCCCGGGGTGACCATAGTGACGCTGTCTGGTACCTACAGCCAGAAAGGGACAGCTCCCGGTGACACGTGACAGTGCCAGGCATGTGCTATGGTGCAGTGAGCTCTGTGACCCACACTTTTGCCTCTCGCTCTGTCAGCCAGTCTGGCAGACGTCCAGCTCCTATTCCCTCATGTCTGTCCCCTGCCCGGTGCCCACTGCCGTCAGTGAGTCCTGAGTGCAGGCTCAGGTGTTGGGGTTTGGGGCAGGTGGCCCAGGGTGCCAGTGCAGAGCTGCTGGCCCTCAGTGAGACTGGTGGAGGTAGAGGGGCCCTGGCGTGCAGAGCTCCCCAGGGCTGATGACCCCCATACATCCTCTGGTGAGAGCACCTGCATGGCTGGGATTCAGTTCTCACCTGATCCCTCCCACAGGGTGGGTTGTGCTGGCACCTGGGCTCTGCAGAGATGCACGCCATCAGCAGCCAAATTGAGAGAGTCTGTTGGCCTTGGTGCTCGGCTGGGTAGGTCTTTGGGAAGGTCAGGTCTTCTCCGGCTGCGGGGCGTCTTCGTCACATCCCCATACACTCAGTGTTTGTCCCGCAGGGTCTGTGGCTTCAGCTCCTCTCCCCACTCACTTCCGGCTGCACGTGGAGGCTGCAGGTCGTTGGTTTTCAGTGGGTACAGCTTCAGGCAGAGTTTTCCCTCCCCAGTCACAGAGCAAAGGCGAAAGTGCTGAGGTCTCTGTATATCAGGAGACCGTCAGGCCCTGGACTGGCCCTTACCGTGGCAGTGATGAGCTTCAGCTCTGTCTCAGTCATCAACTCAGATGTGACCTTTCTGTATGATCATTTCCTCTTAAGATTTGGGAATAAAAGTAGGGAGAAAGGGGCCTTTAATCTTCAGGTGATAGTTAAATACAGCAGAAGCTGAAGAAAAATATTAGGGAAGTAGAGGTAAAACTACACTTTTCGAAAAGCACGAAGTAATTCAGCATATTCCTATCCTTTACTATTAGTGTATATAAGATAATTTATGTGCATCATTAACATACAATCAATCTGACATTTTTCAAAATAGTGGGTTTGAGATGTATGTTACCGGGTAAGAACCATCCATGAACCATGGGGACCTGTGGAGGGCCTGTCACGTGTAGGAAGTGCTGTCGAATGCTTCAGAGAAGTGCTGCTGGCTTGTCCATCATTTAGTCAGTGAGGGGCTTGACCAGTGAGTGCAAAGACCCATGTGAGCTGGGTGCCAGTGAGATGTGGAGAATTCAGATGGTGCTGTTGGGTTCTTTCCCTGTGTATAAAGAGTGTGGTTCCTTCCCCATAGGCTGGAAATCTTTAAAGGGGCGGCTTTGCAGACTTTTCTGTTTCCTCCTTTTGCAGTCTTATTTTTTTCAGCAAGCATTTCAAGGTAATGAACATTAAGTATATCGATTTTTCTACTTCATCTCATTTGGATCTCGCTGTGATGTTTGTTAAAATGTGATGTTTTACCAGGGTAGTTTATGTCTTCTTTTTTACACTTTCTGGTGGAAAGTGCCTTGAAATAAATAAAACGTGACAATATTT EMBV3_25876 AGTCCATAACCTACATGGCTTACCTGGTGTGATAGGAGGCCTTGCTGGCATCATCACCGT Gene GeneID:281454|RHAG:NM_174171:198_cdna Constitutive 0 NULL GeneID:281454 23 GENE RHAG NULL Rh-associated glycoprotein EMBV3_40115 TTTCGGTGTCTGAACTGCTCAGCTTCGCAAGTCTGCTCTCAGGATGGCCCTTTGTATCAG Gene GeneID:528946|PCGF5:NM_001077980:33_cdna UTR3_Alt 2 NULL GeneID:528946 26 GENE PCGF5 MGC142374 polycomb group ring finger 5 EMBV3_41435 AGTCTACTACGTACTACCCACCCCCAAGTGAGTGATCTGTTCCCTGTGTTTACACTGTCA Gene GeneID:513043|NXT2:NM_001100353:25_cdna UTR3_Alt 1 NULL GeneID:513043 X GENE NXT2 NULL nuclear transport factor 2-like export factor 2 EMBV3_32478 CTTCAGTGGCCCCTCAACACCTTTCTCTACATTTTGTGGGACTGGCGATGCCTCAAAGAT Gene GeneID:505351|NUCB1:NM_001075199:124_cdna Constitutive 0 NULL GeneID:505351 18 GENE NUCB1 MGC143428 nucleobindin 1 EMBV3_13257 GAAGATCAGGATAACCAGGATGATAGCAGTGATGATGGACTCCTTGCTGATGACAGCTGC Gene GeneID:533853|SENP6:XM_002690035:31_cdna UTR3_Alt 4 NULL GeneID:533853 9 GENE SENP6 NULL SUMO1/sentrin specific peptidase 6 EMBV3_08775 TTTCTCTGCTGGGCATGTTCTTTGGGGCCTACCTGATGGCACTGGCAGTCCTGAGTCCCT Gene GeneID:527884|GPR172B:NM_001075901:107_cdna Constitutive 0 NULL GeneID:527884 14 GENE GPR172B GPR172A MGC140520 gpcr41 G protein-coupled receptor 172B EMBV3_17466 TGCCTCCCGTAAGTTTATGCCTCTGCCTTGTTTTCACCCATTTATCACATGTTTATCTGG Gene GeneID:100295193|LOC100295193:XR_084084:501_cdna Constitutive 0 NULL GeneID:100295193 26 PSEUDO LOC100295193 NULL hypothetical protein LOC100295193 EMBV3_03895 TTCAGTCGCAAGTTACTCAGGTGATACAGGGTCCTGAACGAGGTGGTGATCGACAGAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09726 GCCTGTCGTTATTGCTCAATGCTATGTACCTGTTGTTGAATGTGGGTTTCCTCGTAGCCC Gene BVV0102_254697 - 1 EMBV3_35166 GK000002.2:125324176-125343512 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106563 TCONS_00106566 TCONS_00106564 TCONS_00106565 TCONS_00106567 1 XLOC_062836 Coding TCONS_00106563 XLOC_062836 Coding Coding GMEB1 2:125338870-125357660 j TSS78411 6085 1 TCONS_00106563_3 415 0.0806902218570255 6 0.676459630634946 0.000643760202058264 0.000477927713556816 0.000398145470949587 0.00126290133122648 0.00144555345169875 0.000129560471336698 0.000489178009232477 1.32651811778352e-09 0.000439187646221896 0.000156595535336412 6.46069493792707e-10 8.55273800116432e-05 0.000149971126109942 0.000172749941209921 0.000113648071035936 0.000874171423480952 6.70684236778564e-05 0.000437810504865936 0.00063112765470672 0.00239401395350441 0.000283679860411267 7.46477347804972e-05 0.000117349004155672 0.00031286391224087 1.6759469217736e-08 0.000384768954048567 0.00051594901898616 3.55931610754558e-05 3.68243340599881e-05 0.000229788702946814 NM_001046475.1 GMEB1 Bos taurus glucocorticoid modulatory element binding protein 1 (GMEB1), mRNA. 0.0 2500 99.86 0.228430566967954 NM_006582.3 GMEB1 Homo sapiens glucocorticoid modulatory element binding protein 1 (GMEB1), transcript variant 1, mRNA. 0.0 2569 91.82 0.294823336072309 TCONS_00106563_3 sp|Q2HJ87|GMEB1_BOVIN GMEB1_BOVIN Glucocorticoid modulatory element-binding protein 1; 0.0 841 99.76 0.997590361445783 0 coding 0 0 0 0 0.0409123977069075 0.722682172831846 -0.0109163592783404 0.890113256240854 CATGTGCTGAAGTTTTATGTCTCCAGAAGTGGCAACAGATCTTGCTGGTCTACAAGAAAATGATGGACTCCGGACAGATTGATTTTTACCAACATGACAAGGTTTGCTCCAATACCTGCAGAAGCACCAAATTTGATCTTCTTATCAGCAGTGCGAGAGCTCCAGTGCCAGGACAGCAGACAAGTGTGGTGCAGACGCCCACATCGGCCGATGGTAGCATCACACAGATTGCCATCTCAGAAGAGAGCATGGAAGAGGCAGGGCTGGAATGGAACTCGGCTCTCACTGCTGCTGTCACCATGGCCACAGAGGAGGGCGTGAAGAAAGACTCAGAGGAAATTTCAGAGGACACTTTGATGTTCTGGAAAGGAATAGCTGATGTTGGACTGATGGAAGAGGTTGTCTGCAATATACAGAAGGAAATAGAGGAGCTACTTAGGGGAGTTCAGCAGCGGCTCATCCAGGCTCCCTTCCAGGTCACAGATGCTGCTGTTCTTAACAATGTAGCACATACATTTGGCCTAATGGACACAGTTAAGAAGGTTTTGGACAACAGGAAGAACCAAGTAGAACAGGGAGAAGAGCAGTTTCTCTATACTCTCACAGACTTGGAACGCCAGTTGGAAGAACAGAAGAAGCAAGCCCAGGATCACAGGCTGAAATCCCAGACAGTTCAAAATGTGGTACTGATGCCTGTGAGCACTCCTAAGCCTCCCAAAAGGCCCCGGCTCCAGCGGCCAGCCTCCACCACCGTCCTGAGCCCTTCTCCTCCTGTCCACCAGCCTCAGTTCACGGTCATCTCACCCATCACCATCACACCAGTGGGTCAGTCATTTTCCATGGGCAATATTCCAGTGGCCACCCTCAGCCAGGGCTCCAGTCCTGTGACTGTCCACACACTGCCTTCTGGCCCTCAGCTCTTCCGTTATGCCACAGTGGTCTCCTCAGCCAAGAGCAGCTCACCAGACACAGTGACCATCCACCCTTCGTCTAGCTTGGCACTGCTGAGCTCCACCGCCATGCAGGATGGGAGTACCCTGGGCAACATGACCACCATGGTGAGCCCTGTGGAGCTGGTGGCCATGGAGTCTGGCCTAACCTCGGCCATCCAGGCAGTTGAAAGCACCTCAGAGGATGGGCAGACCATCATTGAGATTGACCCAGCCCCAGACCCAGAGGCCGAGGATACTGAGGGCAAAGCAGTCATTTTGGAGACCGAACTGAGGACTGAGGAGAAAGTCGTGGCTGAGATGGAAGAACACCAGCATCAAGTCCACAATGTGGAGATTGTGGTCTTAGAAGATTAACTGGGGGTCTTGGGGCCAGGAGATATGTTTTGGTTTGGAATTTTAATTATTTGTTTATTTTTATCATTGTCCCACTCATTTCCACATAGGATCCTTTTTTTTTTTAAAAAAACAAGATCTCATTGTTGTAACTGAACATGTCGGGTCCCTTCCAGCCCCTCTCTGAAAAATGGACAAAACAAGCTGCCCTTCTGGAAGTTGAGAGTAGGTCATTCAATGTCCTAACCGTCTTACATCAAGAGAGTTATTTCTTTGAGGGGAGGCATCAAGATAACCCGAAACCCTCTCCAGAAGTCACTTTCCAGGCTGGTCTCTCTGTGTATACATGTGGTTTTAGTCTCATAAGGTGCATTGACCAAACCAGGGAACACAGATCTGACCCTGAAGGCAACCCACTCACACATGGATGCAAAAGTATACTTGATGTTGTATCCTGAAACAAGCCCTCAGAGGCCAGTGCAAAACCCCCAAACAAAAGTGAGTTGACTCTGCTTAGAGGGGAAGATAACAAACTAGCAGAAGCTTAAAAAGGGAAGTGCTTTGGCCAGGATGGGGCAAGGAAATTATCTTACTTCCAGAAGTGCTACTAATGCCTCTTGCTGTCTCTGAGGGTTACCACCATGGGTGCCGTTTTGAGGCAAGGCCAGTGTTAAGCGGAAGGGTACATTTTCACCAAGCAGGTGGCGTCAGGGACCTGCAGCTTGGCAGAGATAAGAATCCAGAGATGTCACAGCTGTGCTTTGGGGCTAAGGCTTACCTTGCAGCCGCTCTGTCAAAGCACTTACCCTCCAGGTCCATTCATTTGCAAACTGTGGTGTGGTATAAAATTGCTCTGGTCCTTAGACTGTGGCTGTTCTGGGCAGGTGGGGCTCCAAGGCCATCATTTTTATTGCATGACTCCAGGAGCAGGAGATTTCCTCTTCCAGACCAACTGCCCTTTTTTGCAGGGCCCTTTCTTGACTTTGGAACCAAAAGCAGCCACTCTTTTGGTGCTTCCTCTTGTTTTCCCCTGTATCCCTGAATGGTTAATGGCATCTGTCTCCTGGATCCCACGCTCTTCAGCTTTTTGGCTGATTCAGAGAACAGTGACAGGTGGCTGCCTGCCTTCATCCCCTTTTAGATTCATTTCTACCATTTATACCACAGATGTTTCTGTGAGATATTGAGCTCATAAAAGACCCTTAGGTTTGGCAGGGAGGACTCAACACCCCAGCCTATCAAGTAGATGTCTCCTGAGCAAGCTGGACTTCCTGGGAAAGAAGCATTGTCTGCAGCATTATATTATAGGAAATGTACCAGGAATGTAATCATAATGTCTTTGGGTGGGGAGGGGGTATTTTGTTTTGTTCTTGTTTTTAATGTTTTTGTATATTTGGAGCTGGGCCCATTTTCTGTGCTGTGATTCTTTCTCTTTGACCATCTTCAGTGTTTGGGGCAAGAGTGGACCCTGGTTTTTATTTCTAAAGAATGCATTGTTTACTGCACTAGGAAAAATGTAGGGAAACTGCAGACCATTTAAAGGAAAAGTAGGTCAAAAAAGAAAGCACACATCTTAGGAGTGGGAGGTCTTTTTTTTTTTTTTAATTAAAAACAAAACTTTGACCTGTAGTTTCCTTCTTTTTTTTTGAAGGCACCCACCTGAAGCTATGTTTCTTCCAACGGATGTTGGAAACCCTGTTGTTAAGCAAGTGAAAACTGCGTTCTGCCATCCCTCCGATAGCTGTGTATAGCTAGAGAAGCCCTCTGATTTGGAAGGGTCAATCTTAAAAGGCTTAAGGGTGAAATTTCTGAATCCCATGCAGTTTTGATTTTCAGCTTTAAGATTGTCCGGGGTTTTGTTTTTCTTTTCAGAATAGTCAATAGACAGAGCAATCAATTTAGAACAAAGCTTTGGCCCTTAATATATCTTTAGTGAGGAAAATGACTTTTATTTCTTGCTTCTTTAGATTTTCTTTTGGTACATAAACAAAATTTCTGCCTAAGTCTAAAACTACTACTTGAACCTAGAAAGGCACATGTCATCCCTCATGTGGTTTTTAAGGACACTTTTCTCTTTGCCAGAGACAACAGGCTTAACTCTGGACAGAGGAGGAGCCCTAGAGAACACCTACATGCTAGCTTAGGTTCCTTTCTTATTTCAGAGATGTTGGTACTGTTTTAAAGTAGTGTGAGCATCATGCTTCCTAAGTCAAGAGATCGCCTCCTAAAGACAGAGCCTGTTTCTTTTCACTCTCTGAATATTCCACCTGGTGGAAATACATGAGCTATGTTGTTTTCCTGGTCTTCCAATAGCCTGTCGTTATTGCTCAATGCTATGTACCTGTTGTTGAATGTGGGTTTCCTCGTAGCCCTGGTCTAAATGAGCTCAGATGGGGTGAGACACATGCAAGGCACTGCTGTGTGCACAAGCAGTTGCAGTGAATCATTCCTCAGGCTGAGCTTCCAGTAGCCATCTATCTTTCTGTTCCCTCACTAAGTGAATGTTTGTAAGTGTCACCTATGTGCCAGGCTTTGTGCTCGGCACTCGCAGTACAGAGATGAAGGCTCGCTCAGTCCATGCACTCAAGGGACTCATTCTCCAGAGACTGTCTGGAGTTAAGAACTGTATTTCAATATAATTGGTTTCCTTTGTAACCTTATGTATTTTATTTCACGCATTGATAAATATTGTTCCGAGAGCTGGTCCATGGATTTCAGAAGGCTACCAAAGGTACAAAATGGTTAAGCCTTTCTCTAGGGAGATACTGAAACTAATCATCCAGTGGGATAAGTGCAGTGGCAGAGCTATTGGCTGGGAGAAGAGAGAACAAAGGGTCAAGCGTCTAACCCAGCTTGGAGGCAGAGATCAGTAAATAATGGGAGTACTTCCTGGAGAAGATGTATACCTAACCTGATTTAGGACAGACCATTTTTGGCTACTTTTTTGGATTCCATTTTCAAGTTGTTGGACTTAGGTATACAAGAAGGGGGAAAAAATCCGCTGTCTTGTTGCTTCTGCCTCCAGAGCTAGGCAGAGTCAGCAGCTTAGATAGGCTCTCCTGAGACCACTTCACTGGAGAAAGCCCAGTCATTCATCAGCTTCTCAGAGTTTCCAGCAGATGAATCCAGTACAGGACTGGACTTTAGCTGGTAGAAGGTAAATGCCCCAAACATTCCCGCAGTGTGGTTTTCACAAAGGGCTCAGAAGCAACTGTTCAGCTGTCTTACCTTGGCCATGCCCCTGTCTGGTGCGTGCCTGTTCTCTTCCCCTTTTCAGTTTCCAGGCTCCATCCCTGTCCCCTCCCCCAATTAAAACAAAACTCCCTGCCATTCCAAAGTTAAAAAAAGAAACAATAGACTTGAATATTTAGGATTTCAAGCTGTTTCATGTGAAGTTTCTTTTATGCTTCTGTCCATATTTGGGGAGGAAGACCAGAATTAATCCAGATACCCTCAAATTTAACATTCAACCCAGGTGGATTGACTGTTTAGTGGTGGCATTTTAACCTATTTCATGAAAAGCATTAAAGGTAAGTCTGCATGGTGGGAAGTACTGGTAACATTTGATGATAAAGATAGTGAAATCAAGTACAAAATATGGAACTCCTAGTTCATTGAGTTTGGAGAATGGCTCCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGTCTGGTAGGCTGCAGTCCATGGGGTCGCAAAGAGTCAGACACGACTGAGTGACTTCACTTTTGCTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGTAGCAGCAGTTCATTGAGTTATAACTGGCCCACAACTCTCAAGGAGGCAGAAAGGACAAAGAAAAGGTTGAATTCTCAAAATAGGCATGAGTTGTGATTCACTTGGGTAATGCTCCTGAGGAAATAGTCCTTTCTGAGACAAATCAGATTCTAGGTTAGCTAGCCCCTGCCTTTTCAGTCAACAACCTAGTACAATTGATCACAGACCCCTCACACCTTGGATACCTCTTCCCTGGGAAATTCTTGTGTAGTCTGTAATGTACTACAATAATAAGCAAGGCTGATGCGCTAAACAAAGGATCAGTTCCGCTAGACTAGCACTCTCTGCCCCTGGTATTCTCTTCTTAGATAGCCTTAGTTGAGTCATTTCTAGTTTTCCTTGCCAACCTGGAACACCTTTCTTAGTCCCAAGCTAGGCAATCGCGCGCCCTCTAGAAGGTTCTACTTTCCTTGAACATCCTCACCATGCTGCACCATCCTCCTTGCTTTGGAGAAACCAGTGTGACTTAGTTCCCAAATCCTGCCATGTAGTAACTCTGCCTTTCTTAGCAATAACTTTCTTATCAACAACTCAAGACAATCATTTCCTTCCAAGGAGACCCCAAGACCCAAACCTCACCGTACATCCAGAGATTTCAGTCTTCACTCTAGAACAGCCTTCTTAACTCTAGTCATCACCTGAATCGAGGCATCTTTGGGATATGCTTGTGCTCGAAGTTCCTCAGAACACAGATTCTAAAATCTATCTTTCACACCTGATCGATTCTCTACCTATGGTCCATAGCCCAGGCCAAGACATGCCTGTTTGCTGGATAAATTATTGCAGCCCAGTATGATTCTTAACTACATCTTCATAACTACCTGAAGTTTCTGTTGTGTCTATGAGGCTCCCAACCTGAAGACTCCTGAAGCCCTCTCATCC EMBV3_08095 GCAACAGAGCCTCACTCACTCGAGTGCACCGGCATGTGTCTTTAAATCATGAGTTGATGA Variant GeneID:506657|MRPL55:NM_001075276:17_cdna 335^989 3 EMBV3_37368 GeneID:506657 7 GENE MRPL55 MGC137378 mitochondrial ribosomal protein L55 EMBV3_20743 TTCTATGGCACAGGCTTGGGGGTGTACATTAGTTCTGCTCTTGTCAATTCTTCCAGGCAG Gene GeneID:786897|LOC786897:XM_002688787:170_cdna Constitutive 0 NULL GeneID:786897 7 GENE LOC786897 NULL similar to hCG1791432 EMBV3_29008 CTGTTGGGTTTCTCCTTTTCCATTGCTGGCCAGTGACTATCAGAGACACCATCACCGAGT Gene GeneID:532555|GOLPH3L:NM_001099052:124_cdna Constitutive 1 NULL GeneID:532555 3 GENE GOLPH3L MGC166159 golgi phosphoprotein 3-like EMBV3_10955 CGGAATTTAGGCATTCTGAAATACGGGACTCCTGATGGAATCTTCTGGAAAGTGAAGGGG Gene GeneID:282022|PTGS1:NM_001105323:12_cdna Constitutive 0 NULL GeneID:282022 11 GENE PTGS1 NULL prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) EMBV3_26699 GTGACTTTCCTCAGTTCATCAAACTTGCCTGCACAGACACCTTCAGGCTAGAGTCCATGG Gene GeneID:785145|LOC785145:XM_002690714:374_cdna Constitutive 0 NULL GeneID:785145 10 GENE LOC785145 NULL similar to olfactory receptor Olr791 EMBV3_24533 GTTGGCATTTGATACCTAGAGCAAGTAGTGACTTCCAAGGGGCTAAGATTTTGCTGAAGC Gene GeneID:528021|ANKRD13C:NM_001098719:46_cdna UTR3_Alt 1 NULL GeneID:528021 3 GENE ANKRD13C MGC157217 ankyrin repeat domain 13C EMBV3_06658 TGGAAGCCAGGAGTGGAGCTTGTCCAGGAGGCAACTGGAAGCAAGAGTTGCTGAAATTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28313 CCTCTTAGACGACCAGTGATTCCAGTTGTCCCGGTTTGAAATAAGTACGCCGTGAGTATG Gene BVV0102_087676 + 0 NULL GK000020.2:22323910-22333022 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113524 TCONS_00113525 1 XLOC_069055 Coding TCONS_00113525 XLOC_069055 Coding Coding MIER3 20:22297330-22327176 = TSS84902 5202 1 TCONS_00113525_4 549 13 0.826135030993466 0.000546621666769876 0.000441648506753479 0.000314652680598427 0.000261118178621996 0.000317046494742323 7.97619769465362e-05 0.000181517572934251 0.000346775455418483 0.000640881561395869 0.000536255430668319 0.000260233303236642 0.000141592649510457 2.9781298364692e-05 0.000142577041039102 4.67651352349656e-05 0.00262660510609528 0.000916003079028091 0.00298076216377631 0.00130266857903357 0.000600024690335046 0.000125458201807322 0.00175792706891097 0.00161319366349229 0.00181760122896438 0.000518095645860925 0.000413075217071703 0.000471923852499769 0.000540994830172357 0.000290304073174118 0.00139108574246041 XM_003583694.2 MIER3 PREDICTED: Bos taurus mesoderm induction early response 1, family member 3 (MIER3), transcript variant X1, mRNA. 0.0 9369 99.94 0.999615532487505 NM_152622.3 MIER3 Homo sapiens mesoderm induction early response 1, family member 3 (MIER3), mRNA. 0.0 7441 92.00 0.999615532487505 TCONS_00113525_4 sp|Q7Z3K6|MIER3_HUMAN MIER3_HUMAN Mesoderm induction early response protein 3; 0.0 1072 97.64 0.998178506375228 1 coding 0 0 0 0 -0.102308304759515 0.408127010571876 0.0694894870478355 0.221295822663522 TCGCCCTAAAGGTACCAATATGGCGGAGGCTTCTTTTGGAAGTTCGAGCCCAGTTGGGTCTTTGTCTTCTGAGGATCATGATTTTGACCCCACTGCTGAGATGTTGGTCCATGACTATGACGATGAAAGAACTCTCGAAGAGGAGGAAATGATGGATGAGGGTAAAAACTTCAATTCTGAAATCGAAGACTTAGAAAAGGAAGGAAACATGCCTCTAGAAGATTTATTGGCATTCTATGGCTATGAACCTACAATTCCAGCTGTTGCAAATTCCAGTGCAAATAGCTCCCCAAGTGAACTTGCAGATGAACTACCAGATATGACACTAGACAAAGAGGAAATAGCAAAAGACCTATTGTCAGGTGATGATGAGGAAACTCAGTCTTCCGCAGATGATCTGACTCCATCTGTGACTTCCCATGAAACTTCTGACTTCTTCCCTAGACCTTTACGATCAAATACTACGTGTGATGGAGATAAAGACTCAGAGGTTGAAGATGTTGAAACAGACAGTGGTAACTCACCTGAAGATCTGAGGAAGGAAATAATGATTGGTTTACAATATCAAGCAGAGATTCCACCTTATCTCGGAGAATATGCTGGTAATGAGAAAGTGTATGAAAATGAAGACCAGTTGCTTTGGCGTCCTGGTGTGGTTTTGGAGAGCAAAGTTAAGGAGTACCTTGTTGAGACCTCATTAAGAACTGGAAATGAAAAAATAATGGATCGGATTTCTGCAGGAACACATACAAGGGACAATGAACAGGCATTATATGAACTTCTCAAGTGTAACCATAATATAAAGGAAGCAATCGAAAGATACTGTTGCAATGGCAAGGCATCTCAAGGAATGACTGCATGGACAGAAGAAGAATGCCGGAGCTTTGAACATGCACTCATGCTTTTTGGAAAAGATTTTCATCTTATACAGAAGAATAAGGTGAGAACTAGAACAGTTGCTGAATGTGTAGCATTCTACTATATGTGGAAGAAGTCTGAGCGTTATGATTACTTTGCTCAACAGACAAAATTTGGAAAGAAACGATATAACCATCACCCTGGAGTTACGGACTATATGGATCGTTTGGTGGATGAAACAGAAGCTCTGGGTGGGACAGTAAATTCTTCAGCCTTAACTTCTAACCGACCTGAGCCTGTACCTGATCAACAGCTAAACATTCTCAACTCTTTCACTGCCAGTGATTTGACAGCTTTGACCAACAGCGTAGCGACCGTCTGCAATCCAACGGATGTGAATTGTTTGGATGATAGCTTTCCTCCACTGGGCAACACGCCCCGTGGACAAGTCAATCATGTGCCTGTTGTAACGGAGGAGTTACTCACCCTGCCCAGCAATGGGGAAAGTGATTGTTTTAATTTATTTGAGACTGGATTTTATCACTCAGAGCTGAACCCCATGAACATGTGCAGTGAAGAGTCAGAAAGACCAGCAAAGAGATTGAAAATGGGCATTGCTGTTCCTGAATCCTTTATGAATGAGGTTTCTGTAAATAATTTGGGTGTAGACTTTGAAAATCACACACATCATATCACCAGTGCCAAAATGGCCGTGTCTGTGGCTGACTTTGGCAGTCTGTCTGCCAACGAGACCAATGGTTTCATCAGTGCCCACGCTTTGCATCAGCATGCCGCCCTGCATTCTGAATGAAGCGAGTGAAGGGCCCAGAAACAGTGGGTGTGCAGTACCAGTACCAGGAAAGTATCAGGTTTGCTTAGTCTTTCACTGGAAGTTTGAACTTTTTTCACTATGACATCAGTGATGTCAGTATGTATAGAACTATATCTTGATTTATCAAGAGTATTTTCATTTTCAATCCATAAATGTGGAAATGAACTATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTATCTCTTCCTCATCCCCAATACCTCTTCCCCACTCCCTTCTTTTTCTATTCTTTTCTGTTCCCCACTGCCCTCACTCCCATTTTTAAAACCTGTAGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGAGTGGCTTCTATTTGTGTAAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGATCCTGATCCCTGCTCAATGTAGCATTTTTTGGTTTTATTTTCTTAATTAAATAAAAGCAGGGGTAGGTTTCTTTAAACTGCACAAACATGCAAGGATTTTTTAAAAAATGGAAACTTCTCTCATGTTATTCAACTAGAGCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATAGAAGCCAGCACGAGGAACTGCGTGCAAATTATGAAGACGCTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGGGCTACCTTACACAGAATTGGTCATTTTACTGCCGGAAGACTTCTGTGTAACTTCATTTATTGGCTAAAAAATTGGCATTTGAAAATACGGAATTTAGATGGGGTTTTGTCCACCATTATCAAGATTGTAATCATAAAAACCATACCGGTCGTTGCTAACTTCGTTTTTCCTGAGGCAGTTGACTTGCAGGGCACAGTCGACAAAGCCAAGGACGTTGCCACTTAGACTGGTTTACATTTGGGACACTTTTTCAGTTGTTGTGTAGTGCTGCAGTTCAAATGTTAATATTTAGGTGGGATTTCTAGATCCTACACATAATGCAGTAGAACCTTGAAGTACATTTAAACTTTTCTGTTTAGCTTGGACCAGTTGGCAAGAAAAAATGTGAGTTTCTATCTGAAATACAATGGTACGTTACCACTTTTAAGTTCTAAAAAGTGATTGACGTTCAGATGCGTCTCAAAACTCACTTTTATTTTTATTCTAAACATTGTGAATGAGAAACCATTGTCATAAACTCTGGCCATTTTTGCTCTGTAGACATGCATCTTTAAGTTATAAGGTGAATTCATGCAATATGTAATGCAGTGTTAGGATGTGATAAGCTTTGCTTTTATAGTTCAGTTAAAACACAGAATTTTCCTTTTTTTTTGCACCGTCTTAATTAAAATTTTCAACTTCTACTAGTTGTCTTGCTTTGCCAAAACTTAAATATTTGGCTACATTGCTGATATTTTTAAGTATAAGTCGCTTCAAGGTTGTGCTGATGAATAGATAGAATGTAGTGACCTTAGTGATGGAAAGGGAGGGTATTTATTATACAAACTGTGAACTGCAATGACATCCTTTGTTTTGGATGATTTGTATTCTTGTTTTTCTTTGCAGCATTTTAATGAAGATTGCTTTGAAGTGTTTACGCATTAGCACATTTACTTAAAAAGTTAGTTTAGCACAGTGGACGAAAGTAGTTAAATTAATAACTTAAAGTCAGTCTCTAATTTATACATCTAAAGTCAGCATTCCTGTATGCACACAGTAAATAATGGGTAGCCTGGGCTTTTTGTTGCTTTCAGATATTTTTATCCAAGTTATCAGCTTCATATTGCTGTGGTGTTGTGCTAAACTTTGAACCTAATTTCTTCTGTTAAAAATGAATACATCTATAATTTAGTAAGATACTGGCCATAATCTTCCATTGTTATAACTTTAATTTTTACTCTGGGTTTACAGTGGCTGGTCTGTATAAAATAATTTACACAAAGATGACTGAATGCTAATACCAGTTGCACTTAATGAACATGCCCATTCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGATCTTGATATAAGATGGAAACAGTGTTTCTTATCTAAAGTTTTGATTATCAGCAAGTTGAATGGACACTTTAGTTATTTAAATAAAGATTTTTGACCAAAATCCAGAAATGATATGAGAGAAAAATAAATTCCAGCTAGTTTAATAGATTTTTAAACACCAATCTGATTTTAGCCTCTTAGAGAGTGCTAACTAGCTGGTAACGTTTACTTTTAATTCCTTGTTAAAATGAGGCAATAATTTGCAAGATTTTTGTATATATATGTAAATTCTTCATATCTTTTTAGATCTAATTCAGTATTTTCTGACTGCTTCCTCCATGTATGATACCATTTTTGTGCATGCTTGATGTGACATTCATAAACTGTACCCCTCTGGCTTTATTCATGTAAAATAACTATTTATTGAATTTCCTTTTAAATCTGGGTTTATTGGGTTTTTTTTCCTCTCCGTTTAAGCATCTTAACAGAGAATTTGTTACTGTTTCTTAGAAGAATTGCGTTTGAGAGCGTGAAAATAACTGATTTGCAGTCTTATGAAGAAACAATAATGCCTTTATTATTAAGTGTTAAGCACAATTCTTATAACAAACTGTGATAAATTCTTTTTTTTCTTTGCCATATTATTTTCATATGAACAAACCAAAAATCCACGGTGAGCAGTTGCAGTGTTGGCTGATGTGTCTTTTTATGTACAGGGGGTTTGAAGAGGACAGCGGATTCATTTAGAAGTGAAACTGGTGCTGTGATTATAGCAATACTTTACTTTTGTTAGTTGTACTCCACTTTTTCATGCTAGCTTTTTCAGTGTTTAGTTTTCCTCTTGTTATGGTCAACTGCTGAATTTACTTGAAGGATGTAGAATACTGTTTAAACAATACTAAAGTCTGTACAATTAGGTCAAAGAACTGTGCAATTGTTTCCTTTTTAATTTTTACAATTGAGGGTCATAATATTTGAGAACATCAAATCTAATAGAGCATAGTGAAACTATTTAATTTAACCAAAGTCTCTAGTAAATATTTCAACTTTGAATGTAAACTAATGAATCAACCTGACCACCAAGGAGATTGTTTGCCCAGAGTTTCAAAGCACATTGTCTACAAATGGAAATTGAAATAATTTATAAAAATATTGACAGTACTATGTTTTTTAAAAAGTTCTTAATTTTTTCACTGAAAGGAGGAAACTGTTAGTTTTATTGTTAAATGTGGTAGATATTAAAACTCCTCTTAGATGACCAGTGATTCCAGTTGTCCCGGTTTGAAATAAGTACGCCGTGAGTATGAGATTGATTAGTGACAATCAGAACAAGTTTTAGTATCAGATGTTCAAGAGGAAGTTGCTATTGTTGCATTGATTTTAATATTTGTACATAAACACTGATTTTTTTGAGCATTATTTTGTATTTGTTGTACTTTAATACCTGGTGTACAGTTCCAGAAATAAAAATCTGGAAATCTTTTT EMBV3_34769 CATGAAGAAGAGTGTGTGTGCCCATCTGGCCATAGGCTCCTACGTCTGTGGATTCGTGAA Gene GeneID:513948|LOC513948:XM_002693766:17_cdna Constitutive 0 NULL GeneID:513948 15 GENE LOC513948 NULL similar to Olfactory receptor 5B2 (Olfactory receptor OR11-240) (OST073) EMBV3_13931 GTGATGGTTTCTCGAGCGGAGATTGACATGTTGGACATCCGGGCAAACTTCAAGAGACTC Gene GeneID:281625|ANXA4:NM_001001440:5_cdna UTR3_Alt 2 NULL GeneID:281625 11 GENE ANXA4 NULL annexin A4 EMBV3_19941 TGGGTCCAACAGGGACAGCTGTGTGAGCCGCTGCCATCTCTGGCTGAATCCAGAGCCTTT Gene GeneID:399559|NAPRT1:NM_001098857:23_cdna Constitutive 0 NULL GeneID:399559 14 GENE NAPRT1 NULL nicotinate phosphoribosyltransferase domain containing 1 EMBV3_37085 TGAGGCCTGAGATGGTTAGAGCCCTTATCTGGTGAACCTTTTCACATGCAGTTCCTCCCA Gene GeneID:523204|ZNF341:XM_002692440:446_cdna Constitutive 0 NULL GeneID:523204 13 GENE ZNF341 MGC152591 ZFP341 zinc finger protein 341 EMBV3_25541 TGGAGCAGATGAATTGGGAAAATTGGAAAATGCCGGGAAAGGCCAACAGGATCTCACCAG Gene GeneID:508357|LOC508357:NM_001082606:5_cdna Constitutive 0 NULL GeneID:508357 8 GENE LOC508357 MGC151678 chromosome 9 open reading frame 102 ortholog EMBV3_09246 AACAAGAATCCAGTTCATAAGATGGAGCCATACCCGTATCTTCCAAGTGCCGAGCGAGGC Gene GeneID:618276|SPATA19:NM_001076498:14_cdna Constitutive 0 NULL GeneID:618276 29 GENE SPATA19 MGC128017 spermatogenesis associated 19 EMBV3_24543 CTTGTAGATCTCAGCCTTGGTGGAGCTGGGAATCGCACCCAGGTAAGGAGCTTGTCTTTT Gene GeneID:509772|HPCA:NM_001025328:82_cdna Constitutive 0 NULL GeneID:509772 2 GENE HPCA NULL hippocalcin EMBV3_27203 AGTAACTGCCTCCTCTGCTGGTAAATAAGATACAATCCAAAGGCACAGAGCACCTGGTCC Gene BVV0101_040443 + 0 NULL GK000007.2:63653801-63709276 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217419 TCONS_00217420 TCONS_00217421 1 XLOC_131505 NonCoding TCONS_00217419 XLOC_131505 NonCoding NonCoding - 7:63694246-63695315 - TSS161921 669 0.2152466367713 2 0.375468164794007 3.95015277113061e-16 0.000457675992187893 7.04823604249062e-05 6.30281451920009e-19 0 0 0 6.18879496712659e-05 0 0 0 0 0 0 1.81141515807832e-20 0 0 0 1.32956605598605e-10 0.00205432508194891 8.03781638060434e-34 0 0 0 4.3143013804119e-05 1.79191140831905e-08 0.00015987925826821 0 0 0 0 noncoding 0 0 0 0 0.710459337915559 0.0151236772266917 -0.0626699516726459 0.221706578383869 GGAGCCCCTAAGCCCTAGCATCCCAACTAAAACTTGACACAGTCAAATAAATAAATATATTAAAAAAAAAAAAAGATTTAGAGGGCCCTCTCAGTGAAGACATGTCTCAAAACTCCCTGTTCAAAACCAGGAGGTCAGGAAGCAAAGGAGTCAGGGCGGAAATGGCCTGAATTTCAGGGACCCGGCAAGTGAAGAGTTTGGGCTTTGGAATCAAACAGACAAGAGCACAAACCACAGCTCCACAACATGTGACCTTGGACAAGCACCTTTACCTCTTCTCTACATGTTGGTTTCCCTCCTTGTAATATGGGATGGAGACTAGTAACTGCCTCCTCTGCTGGTAAATAAGATACAATCCAAAGGCACAGAGCACCTGGCCCAGAGAGATTGCTTCGTATCTGCTATCCAGCATGGCCATCTGATGGGGCCTGGACCTGGCTAATTGTGGGCCCTGCTCCTCCCTCTGCCTGAGCCCCCAGCAGCTTCTCTGACCCAGCTGGAGGAAGAAGCTCTGATGGGCATCTCCTGTCCGTGCACATCAAGTTATTTCTAGTTGATTTGTTATTGTGGTTGTTGTGGTTGTTATTTCTACTAAGAACATTGAGCTATGAATAAACTGTGCATTTTTCTTGATGAATGTGGAAAAGAGATTCTCTAGGGTGTACATAA TCONS_00213906 r 5' 14496 TCONS_00213906 r 5' 13905 EMBV3_19725 CCATTTGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCAC Gene GeneID:100336370|LOC100336370:XM_002692211:1419_cdna Constitutive 0 NULL GeneID:100336370 13 GENE LOC100336370 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_04319 AAACCATCTCGCCAGAGCACGTCATACAAGGCTAGACAGCAACAAGCAGAATTGGCCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08302 CCGAATCCACACAGATACAGCCTCAACCTGAACAGCGATTTCTTTCGAGAGCTCGTGATC Variant GeneID:509212|PIH1D1:NM_001075395:169_cdna 367^608 3 EMBV3_22291 GeneID:509212 18 GENE PIH1D1 MGC142550 PIH1 domain containing 1 EMBV3_12820 TTCGTTGGCCTCTGGTGCTGAAGGAGAACCTACCTGTGCCACTGATTTTCCAAAGTGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08216 TACATTTACGGGATCTCCAGGCGGCCCAGAGATGAATCTGGCTATAGGTGGACGAGAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23718 GCATAGCGAGAAGACTAGTGGACGATACGGATGCTATGAGTAACGCCTGTAAGGAACTCG Gene GeneID:513036|LEPROTL1:NM_001037462:16_cdna Constitutive 0 NULL GeneID:513036 27 GENE LEPROTL1 MGC133536 leptin receptor overlapping transcript-like 1 EMBV3_20261 CAGCCAACCTCAACCAGAGTTTGCCTACTGAAAATATATGGAGCCAAGGCTATTCCTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08480 GAGACGGTGGAGTTCTCACACGATGCTCCATTTCCAGCCTCATTCTGTTCCCACAGTTTT Gene GeneID:615598|TAPT1:XM_002688468:44_cdna Constitutive 0 NULL GeneID:615598 6 GENE TAPT1 NULL transmembrane anterior posterior transformation 1 EMBV3_23250 GTCATTGCCTTTTCCTCAAGGGAGCAGCAGTGGCTTTCCTTAATGATGAAGTTTGGAATC Gene GeneID:506426|CRYZL1:NM_001035037:25_cdna Constitutive 0 NULL GeneID:506426 1 GENE CRYZL1 MGC140715 crystallin, zeta (quinone reductase)-like 1 EMBV3_18479 GACAGCTCAGCAGGAGACTTCTCTTCCCACTACCTCATCTTCTTAGGTCCATTTACCACC Gene GeneID:523070|WBP2NL:NM_001082441:177_cdna Constitutive 0 NULL GeneID:523070 5 GENE WBP2NL NULL WBP2 N-terminal like EMBV3_08925 CATTGGAAGGTGGATTCTTAACCACTGGACCGTCACGGAAGCCCAGACGCACAATTCTTA Gene GeneID:507981|DFFA:NM_001075342:46_cdna Constitutive 0 NULL GeneID:507981 16 GENE DFFA MGC143066 DNA fragmentation factor, 45kDa, alpha polypeptide EMBV3_19508 CTCTAGTTTGAACCAGTGACATGAGCAGTTGGACTCAGTTTGGACATGGGGGAAAGGGGG Gene GeneID:504755|NAB2:NM_001045897:935_cdna Constitutive 0 NULL GeneID:504755 5 GENE NAB2 MGC137935 NGFI-A binding protein 2 (EGR1 binding protein 2) EMBV3_12417 GAGGGCGTACTGCAGGAGGCACTGGACAAGGTGACAAACCGCTACCTGTCCCAGCTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24102 GCTGTGACTCTCTCACTGCACTTTGTCTTTGAACCATCTGTGGACCATGGGGGCAGGACT Gene GeneID:520630|SLC45A4:XM_002692571:250_cdna UTR3_Alt 2 NULL GeneID:520630 14 GENE SLC45A4 NULL solute carrier family 45, member 4 EMBV3_20192 CATATAAGCTTGCTGTTAGCAGAGGGTGTCCCTGGATTCCGTTTTCTGAGAAGGTCAGGG Gene BVT0102_088409 + 0 NULL GK000023.2:16370158-16376205 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132506 TCONS_00132504 TCONS_00132511 TCONS_00132503 TCONS_00132510 TCONS_00132515 TCONS_00132502 TCONS_00132512 TCONS_00132507 TCONS_00132508 TCONS_00132513 TCONS_00132505 TCONS_00132509 1 XLOC_080797 Coding TCONS_00132515 XLOC_080797 Coding Coding UBR2 23:16335842-16375991 j TSS99119 7023 1 TCONS_00132515_5 966 0.0506905880677773 29 0.825794560127528 0.000810634706530185 4.50686031579933e-48 0.000304844467333292 1.78672483691733e-08 6.6498113616837e-65 9.58169026714443e-46 7.65572352866422e-05 0.000242269316715142 0.000321433582218369 2.49641137712025e-123 5.56943165999934e-05 0.000157014214245813 4.14667977425594e-106 0.000488538748764716 5.10591182486474e-05 0.000945510075885948 0.000295130633528126 0.00258748948558356 0.000124711661095381 0.000646119346752739 0.00044366870060796 0.00106831141332697 0.000409220910635306 0.000501749489465664 0.0008778748907156 0.000416997704318161 0.00034311434670624 0.000195843315605494 3.80035688837801e-05 4.60788351711681e-05 XM_005223446.1 UBR2 PREDICTED: Bos taurus ubiquitin protein ligase E3 component n-recognin 2 (UBR2), transcript variant X1, mRNA. 0.0 9160 100.00 0.723052826427453 XM_005248965.1 UBR2 PREDICTED: Homo sapiens ubiquitin protein ligase E3 component n-recognin 2 (UBR2), transcript variant X1, mRNA. 0.0 4461 86.94 0.5245621529261 TCONS_00132515_5 sp|Q8IWV8|UBR2_HUMAN UBR2_HUMAN E3 ubiquitin-protein ligase UBR2; 0.0 1826 91.30 0.998964803312629 0 coding 0 1 1 1 0.0561957914639184 0.775929392073732 0.0392702442223397 0.405711462272701 GCAAAGAATCCTGGCTGCTGTCAGGATGTAATACCAAAGAAGGAGATCTCAGAAGGAGAGAGATTTAGTCCTGGAGTTGGACAGGTTAATGCTACAGATGAGATTAAACGAGAGATTATCCATCAGTTGAGCATCAAACCTATGGCTCATAGTGAATTGGTAAAGTCTTTACCTGAAGATGAGAACAAGGAGACTGGCATGGAGAGTGTGATTGAAGCAGTTGCCCATTTCAAGAAACCTGGATTAACAGGACGAGGCATGTATGAACTGAAACCAGAGTGTGCCAAAGAGTTCAATTTGTATTTCTATCACTTTTCAAGGGCAGAGCAATCCAAGGCAGAGGAAGCTCAACGGAAATTGAAAAAACAAAATAAAGAAGATACAGCACTTCCGCCTCCAGTTTTGCCCCCATTCTGCCCTCTGTTTGCAAGTCTGGTTAACATTTTGCAGTCAGATGTCATGTTGTTAATCATGAGGACAGTGTTGCAGTGGACTGTAGAACATAGTGGACATATCTGGTCTGAGTCCATGCTGCAAAGGGTATTACATTTAATTGGAATGGCACTACAAGAAGAAAAACAGCATTTAGAGAATGTCATGGAGGAGCATGTCATAACATTTACCTTCACACAGAAGATATCGAAACCTGGTGAGGCTCCAAACAACTCACCTAGTATACTAGCTATGCTGGAAACACTGCAGAATGCTCCCTACCTAGAAGTCCACAAAGATATGATTAAGTGGATATTAAAGACTTTTAATGCTATTAAGAAGTTAAGGGAGAGTTCATCCACCAGTCCTGTGGCAGAGACAGAAGGAACCATAATGGAAGAGAGTTCGAGAGACAAAGACAAAGCTGAGAGGAAGAGAAAAGCTGAGATTGCCAGATTACGCAGAGAGAAGATCATGGCTCAGATGTCTGAGATGCAGCGGCACTTTATTGATGAGAACAAAGAACTCTTTCAGCAGACGTTAGAACTGGATTCCTCTGTCTCTGCTGTACTTGATAATGGCCCTGTGGTTTCAGATATGACTCTTACAGCATTGGGCCCAGCACAGACTCGGGTCCCTGAACAGAGACAGTGTGTCACCTGTATATTGTGTCAGGAAGAGCAAGAGGTGAATGCAGAAAGCAAGGCAATGGTCCTGGCAGCATTTGTGCAGAGATCAACTGTGTTATCAAAAGACAGAAGTAAATTCATTCAGGATCCAGAAAATTATGATCCATTATTCATGCACCCTGATCTGTCTTGTGGAATACATACTGGTAGCTGTGGGCATATTATGCATGCACACTGTTGGCAAAGGTATTTTGATTCCGTTCAAGCTAAAGAACAGCGAAGGCAACAGAGATTACGCTTACATACAAGCTATGATGTAGAAAATGGAGAATTCCTTTGTCCCCTTTGTGAATGCTTGAGTAATACTGTTATTCCTCTGCTGCTTCCTCCAAGAAATGTTTTTCATGGCAGGTTAAATTTTTCAGACCAACCAAATCTGACTCAGTGGATTAGAACAATATCTCAGCAAATAAAAGCATTACAGGTTCTTAGGAAAGAAGAAAGTACTCCTATTACTGCCTCATCGAAGAATTTAGAAAATATGGATGAATTGCACCTTCCTGAAGGATTTAGACCTGATTTTCATCCTAAGAACCCTTATTCTGAAAGCATAAAAGAAATGTTAGCAACGTTTGGAACTGCTACTTATAAGGTGGGATTAAAAGTTCATCCCAATGAAGAGGATCCCCGTGTGCCCATAATGTGTTGGAGTAGTTGTGCATATACCATCCAAAGCATAGAAAGAATTTTAAGTGATGAAGATAAACCATTGTTTGGTCCTTTGCCTTGTAGACTGGATGACTGTCTCAGGTCACTAACAAGATTTGCTGGAGCACATTGGACAGTGGTGTCACTTTCAGTGGTGCAAGGACACTTTTGTAAACTTTTTGCATCATTGGTGCCTGGTGACAACCACAGAGACCTTCCATGCATATTAGATATCGACATGTTTCATTTATTGGTGGGCTTGGTCCTTGCCTTCCCTTCACTGCAGTGTCAGGACTTTTCAGGGATCAGCCTGGGCACTGGGGACCTTCACATTTTCCATCTGGTTACCATGGCACACATCGTTCAGATCTTACTTACCTCGTGTACAGAAAAGAGTGGCATGGATCAAGAAAATGCTGCTGGCAAAGAAGAAGAACTAGCAGTTCTTGCTTTGTGTAAAATGATTCAGCAGTATACAGGAAGTGCCTTGAAAGAAATGCCATCTGGTTGGCATCTGTGGAGGAATGTCAAAGCTGGAATCATGCCTTTTCTGAGGTGTTCTGCTTTGTTTTTCCATTACTTAAATGGAGTTCCTTCCCCACCTGAAATTCAAGCTTCTGGAACAAGCCATTTTGAACATCTATGTAACTATCTTTCCCTGCCAAACAACCTTCTTTGTCTTTTTCAAGAAAATAAGGAGATAATGAAATTACTGATTGAAAGTTGGTGTCATAACATCGAAGTTAAAAGATACCTGGAAGGTGAAAGAGACGCTATAAGTTATCCAAGAGAATCTAACAAATTAATAGACCTTCCAGAGGATTACAGCAGCCTCATTAATCAAGCATCTAATTTCTCGTGCCCCAAATCAGGTGGTGATAAGAGCAGAGCCCCAACTATGTGCCTTGTATGCGGAACCCTGCTGTGCTCCCAGAGCTACTGCTGCCAGACGGAGTTGGAAGGGGAGGACGTGGGGGCATGCACTGCTCACACCTATTCCTGTGGTTCTGGGGTGGGCATCTTCCTGAGAGTACGAGAATGTCAAGTACTATTTTTAGCTGGCAAAACCAAAGGCTGTTTTTATTCTCCTCCTTACCTTGATGACTATGGGGAGACTGACCAGGGACTCAGACGGGGAAATCCTTTACATTTGTGCAGAGAGCGATTCAAGAAGATTCAGAAGCTCTGGCACCAGCACAGTATCACAGAGGAAATTGGACACGCACAGGAAGCAAACCAGACATTGGTTGGCATTGACTGGCAACACCTATAGCTACGTCACTACCAAATACATGAACTTGGATTTTTGTAAACCAGCTGGCTTTTCAAGAAAGAAAATAGGAAATGGCTTCTTCTGAATTTGGAAATAAGTTATTTAAGCTTTTTTTTTCCCCCAATTTTTATTTTTATAGCTTCTGGCTCCAGGAACTAATGAAAATCATTTTCTGCCAGCAGATTTTCTTGCATCATTTGCTGTGTCCTTCAAACATAACTTCTTGAATTTTCGAATCCAGGAAGGAGCTTCTCTTCCTGGGCTGGACTCAGCCCATTTGCGGGCATCTGACTGCGTTTGACTGTTCCCCCGTCATCTGAGCCATGTCACATTACTGAACACAGGGAACTCCAGGCCGGAAGCGGATTCAACAGCAGCAGGAAGCAAAGTCTCTGGTCTTTTGGGGGTCACACTTCCTGGTCCCACTCAGTGACGCTCAACCTTGAGGCTGGGTCAGTGTACCCACAGCTGATGGGACCCTACCTCTAAGCAAAGCAGTGTATTTGGAAAGTGGCACTCCCTGTCCCCACTGGCTGTGAGGGGGTTGGGGGACACTCTTGCTGGAGGAGCCTGTGGGAATCCACAGGGGAGATGGTGGTGTCTCTATGTGCCAGCTGATTTTCCGGGCTGTACAAGGTTGGATTCCCCCCTCTTTTTTTTTTTTTTTCTTTTTGCAAGGCTTTTGGCTTTGAGGAAAAAATACTCGTTTTAAAGGGCTTTTTGAAAACTCAAAAGAGTATCCTAATTTTTCAGATAATATATTCTGTTATTTCTAAGACTAAGTTGAAAGAATGTATTCATCTAGAATCAAGCACTTGCAAAAAAAATGAGAATTCAGTGTTTTGAAATTCCCTCACCCCCACCCTTCCAGCATTTTCTGGAATAGATGAATTGCTGTTTACCTGCTAGTTCACTTAGGACATTCCTGGGACAGCCTGTGTGCCCAGGCTTTTTATTATTTTTTAACCTTATTGTTCTTACTAAGAGGTGCCTTCCTAGAATGATAGCCGCTTAGTAAAATAGTTTATAACCACGCCATGCCACACACCACTCTGCCTTGATCATGTGTGCTAAGAGCTTGGGTACGCAGAGAGTGATGGCAGGTTTGGTGGAGGAATCAGTTCGGAGTCTCTCTGAGGAGGGACTAAGGGATGAATGAGTAATAAGAGGTTTTTGGGCTTCTTTAGCCAATGCAGATAGCCATTTCGCTCAGTTTTCTTTGAACTGCGTCTGAAAGTTGCATCCTGCTCAGCTTTGCACCCTCCACAGTACACCCAGGAGGAAGGCCTGAAATCCAGACGCTCAGCTAAAGGCAGTGGGGGTGCAGAAGCCACACTCGCTACTTCACCGGGGTGGTGTATGAAGAACCCCTTCCTCTGAAAGGATGAACTGGACCCTTCGTGCCTGGGACTGACTCACCCATCCGAGAGGAGGCGCTTCTTGCCCAACAGGAAGAAAATCCACGTTAGAACCCAGCACTCATCCCCCTCTTCTGGCCTTTCTCCCTTTCTGGTGGTGTGGTCTGTGGATGGCATCATGATTTTAATGTTTATTTTGGCCTTGGTCACATCCCCACTCCTTTAGCTTTTAAGTCCAGCTTCTTTTGGCTTTTCTCCAGTTGTTAACCAAGCTTAAACTCCGAATAAAACCAGTTTTCTCCCTCTGTAGTAGGATTATAAACTTCTTCACTAAATCATAACAATACTTCAACTTTTAAAACTGACTTCATATAAGCTTGCTGTTAGCAGAGGGTGTCCCTGGATTCCGTTTTCTGAGAAGGTCAGGGAGTCTGAGAGAAAATGAATTTACATCAAGTAGCAACACACACCCGTTTATCTTCTGGTGTGTGTATCATTAAGCTAATTGTCTTCCCCAACTAAGGAATCATCTTAGTCTTATGATTTGTTCCGCATGTATTATGTTTATTGTAGAAATGTTTATATAAACATGCTTTCCATATCAGGGAAAAATCATATCTGTTTAATAAATTGGCTATAACTTTATTATCTGTGGACAACTTGTAAAATTGGGGATGTATCATATGTAAAAAGTTTAAAGATATCCAAATAAATGCTTTAGGTGTTGACATTACTTTGGGTCTGCCTACATTTCCTTTATTTTGTTTCACACGTAAAATGCAGTGGAATTGCCCCCCATGTCACCTTGCTACAAATAAAGTGGGACATCTGTATTAGCTTGAAGTTTAAGATGCTTATATTATTAGTGTCAGTAATTATGGCTGTTAGCCAAACTATTTTGACCTTCTGAAGAAAGCTTGCTCATCATTTCAGCTGATTAAGTCTCATATTGATTGACTATGACAGCTTGTGACCTTTCTGAACTCTCTTGGACCTCAAATCACTGGGAAAACAGGGCCCTCAAAGCCTCTTCCAGCTGGAAGTTGTTTCCAGATTTAAACTCTGCTTGCTTGCCTATTCTTACCTAGTGATCGCCAGGTCCTCCTCCTTACACAGTCCCCAGACACATATACAAAGGAAGCTGCGTGCTGCATTTGCAAGGAAGTCATTGCCTACGAGTGCTCTTGAAAATCCTCTTAGAAGGAAAGCATCAAATAAAACAGTTTCCATTGTGTTTCCTCTGTCTCCTGGTCATTAATGCTGCTCCTAGCTGACTCCCTTCCCTGATCTAACATCGAAAGTTCCAGGACTCATTAAGTCCCTCTGACATGCTCCCTTCTTTCTTTGTCCCTACTTCTGTTTTTTTTTTTTTAAGTCAGGTTTATTGAAGTTTATTCTCCAAATAGTGAAATTCACCCTTTCTAGTGGATGATTTTATACATTTTGACAAATGCATACAGATGTTTTCTAACAAACCACACTCAGTCTGGTTCCATTGCATCACCCTAAGAAGTTCTCTTGTGCCCCTTTTAGGACACCTTCCCCAATCATGACCCCAAACAACCAGTAATTTTTTCTGTCCCTTTGTCTTGCATCTTCCAGAATGTTATATAAATATATCACACGTAGCGTTTTGAGTCTGGCTTCTCTCTAAGAAGACTGATGCATTTGAGAGCCATCCGTGTTCCTTTTGGTTGCTGAGTCGAGCTCCATTGTGCAGATGCTTACACGGTCATCAGCTGTCAACAGCATCGTCAAGCATGTGGGCCTGGAGTGGCATTTTCTGGATGGTTCTCAGCACCCCTGGGAGGGGAGAGCTCCGGGACCCTCATCCGAGAGGTTGACTCCCTCAGTGTTGCCCACATGGATCATCCCTTGCTTGGTCTCCACACTCAGAAGTCTAATTGAATTCAACCTGGGACCAAAGTCTGACAGGATATTCAAACATCTTTGATCTGGTCTGGGAGAGTTCAAGCCCCAGCACATAGCCCACGCAGCACCAGAAGTCTTACTATCTCCACACTGAAGACTCAGGACAGCAATGAAATCATTCCCTCCTTCCCCTTAAAGCTTCTTTCTTGTTTGCGGAGGGAAGTGAAAACTTCTTTCGTAGTTACTAGCATGGGAAGAGGAGAAGTTGCAAAGAATCTTTTAACGCACAGGTGTTCGGGAAGTACCCTTTGCAGGATGGATATGTGGGGGAAGAAGCAGGGCAGAGCTTGCAGAGGACCCCACCCTCCACTGTGGATGGCTCGTGTTGCCCAGGGGCTGTCACAGCACCTCTTGGGCATCCCTGGGTCCACTGCGGGTGAGGCTCGGTCTCCAAACAGTGGACTCTTGTCTCATTGTTGCTCCTTTGCCGCAGACCCGGCGCTTCCGCGGACAAGCCCAAGGAGGTCAGCCGGCACGTTATCTGGAACCTGCAGCAGCCCCACTCCCTCAGCCTGTGGCTCACTCCTGGCTAAGTGCTGAGGGCTTGTGAAGGTGACACAAAAGCTGTGTTTTTGCTGGGGGATATAATCCCTTCTCTTTAAATGCTCTTGCCTCATGATTGAGAATTCCTCTTTGGAGCCCTCAGTGCTTTGGAGAGACCATTACTCTTAAAAAAATATAACTGTCCCTC EMBV3_16419 AAAAGGCCCAACGAGGATTCAGATGAAGATGAGGAAAAGGGAGCTGTGGTTCCCCCTGTT Gene GeneID:508491|CSTF3:NM_001099700:26_cdna Constitutive 0 NULL GeneID:508491 15 GENE CSTF3 NULL cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa EMBV3_10226 GTGCTTACAATGAAAACCCCTGCCTTGGTGAACCTTGCGGATTCTCTTCAAATGGGCTGG Gene GeneID:517825|TDG:NM_001083696:1031_cdna UTR3_Alt 4 NULL GeneID:517825 5 GENE TDG MGC140185 thymine-DNA glycosylase EMBV3_29657 TGAGGGCAAGCCGTACCTGCACGTGTCTGTAGAGTCCCGAGGCCAGCTCGTCAAGATCTA Gene GeneID:506454|KIAA2013:NM_001045942:34_cdna Constitutive 0 NULL GeneID:506454 16 GENE KIAA2013 MGC137732 KIAA2013 EMBV3_28039 ATCCGGCTGGATGGGGCCATCCGCATGCAGCCTCCTGGAGTGCTCTACTCCAGTTTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06875 AATGAGAAGGAGCAGTCAGGAAGCAGTAACGGGTCGGAGAGCAGTCCTGCGAACGAGAAT Gene GeneID:532257|USP24:XM_002686388:225_cdna UTR3_Alt 2 NULL GeneID:532257 3 GENE USP24 NULL ubiquitin specific peptidase 24 EMBV3_09953 GTAAACGGGAAGCCAAAGAAAGTCCGGAAACCTCGAACCATCTACTCCAGTTTCCAGCTG Gene GeneID:528490|DLX2:XM_002685324:186_cdna Constitutive 0 NULL GeneID:528490 2 GENE DLX2 NULL distal-less homeobox 2 EMBV3_29056 AATGACCAGAAAGACCAGCTAAGCCTGAGGGTGAAGGCTTTGAAGCGGCAGGTGGATGAA Gene GeneID:533725|CGN:XM_002686041:239_cdna UTR3_Alt 2 NULL GeneID:533725 3 GENE CGN NULL cingulin EMBV3_16938 GCCACTGACTGGAGGCCACTGTCATGTCCCATTGCAAGCTGGATTGATTTTGTTTCTTAC Gene GeneID:540681|WDHD1:XM_002690950:301_cdna Constitutive 0 NULL GeneID:540681 10 GENE WDHD1 NULL WD repeat and HMG-box DNA binding protein 1 EMBV3_30889 GTCTTAGGGTCCCCTTCACACCCGCCACAGCTGATTATAGTATGTCCACTGCTCATATCA Gene GeneID:510159|MAPRE2:NM_001034374:82_cdna UTR3_Alt 2 NULL GeneID:510159 24 GENE MAPRE2 MGC127154 microtubule-associated protein, RP/EB family, member 2 EMBV3_14217 AGCTGCAGGCCCGCTTCGACGACCTGTGGGAAGACATCAACTACAGCCTTCGCGACCATA Gene GeneID:538914|APOA5:NM_001083492:113_cdna Constitutive 0 NULL GeneID:538914 15 GENE APOA5 MGC140487 apolipoprotein A-V EMBV3_32564 GCTGACCTCATGGGGAGCAATGGGCCACAGAAGTTCTGCATTGAAAAAGTCGGGAAAGAA Gene GeneID:508431|ITCH:NM_001082428:955_cdna UTR3_Alt 3 NULL GeneID:508431 13 GENE ITCH MGC152011 itchy E3 ubiquitin protein ligase homolog (mouse) EMBV3_05142 CAGTCCGATGGCTTGGACAGTCAGAAGATACGAAAGCCCACGAGGAAGGTAAAATCAACC Gene GeneID:786942|LOC786942:XM_002699557:49_cdna Constitutive 0 NULL GeneID:786942 X GENE LOC786942 NULL similar to rCG61730 EMBV3_04912 GTCACTTAGAAACTTGGAATTGCACCACGGGAGTTCATAATAAAGTCTCTGGAAGAAGGG Gene GeneID:539078|CRYGA:XM_002685544:142_cdna Constitutive 0 NULL GeneID:539078 2 GENE CRYGA NULL crystallin, gamma A EMBV3_11924 CTAGAGCTCAGCCTGGTTTCGTCAGTGTTTCCTCAGGATGGGACTCAGACATGAGTTCTT Gene BVT0102_106097 + 1 EMBV3_00929 GK000022.2:12558896-12613416 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129962 1 XLOC_078673 NonCoding TCONS_00129962 XLOC_078673 NonCoding NonCoding - 22:12580354-12581066 - TSS96829 712 2 TCONS_00129962_1 88 0.73876404494382 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.86545937554959e-05 0.00051800711945698 0 0.000306755479719025 0 0 0 0 0 noncoding 0 0 0 0 -0.0352439581440375 0.832019095683221 0.0137979588930582 0.773577889360627 AGTTGCAGAAAAGAATTCTAGGAAATTACAAATATTAGTTAAATTGAAAAAAGTCTGTAATAGGACTGAGAGATAAAATTGCAGAATCTCTCTCTGGGGATACTCATGATAAATAAAATTTGTTTATATATTATTTAAAATATTAAAAAATATATAAATATATATTTGCAGCAGATGTTCTAAACCCCCCAGATCTTCTTTGTGTATCTTTCCAAACCAAGGACAGTCCTGCATAACCAGCATGCAACCCTCCAGAGCAGGAGATCAGAAATCAGCATTGGTGTGACACTGATACCTGACCCAAATGTTTTAGTCAAATTTCACCTATTATCCCAACAAAGTCTCTTTTCTGTTTGGCCTGGGATCACACTTTGCACTTAATAATTGCGTCTCTTTAGTCTCCTTCAACCTGGAACAGATGCTTAGTCTTTCCCTGTGTTCACAACATTATAGTTCGAAGGAGTACAGGCTTTTCATTCTGTCGGCTAGAGCTCAGCCTGGTTTCGTCAGTGTTTCCTCAGGATGGGACTCAGACATGAGTTCTTGGGAGAAATATACCGAGGTGATGCTGTCCTCTCCTCACTGCATCGCATCAGGAGGCTCAGGATGCTGGCCGGTGATACTACTGGTAATAGCAATCTCCATCTCTTGGTCAGTTTGGTGTGTTCAGGTTTCTCCTTGTTAAGTCATTATTCTCCTCTTCATAATTAAT TCONS_00127998 . 5' 21460 TCONS_00127998 . 5' 21460 EMBV3_01268 CCATCCAGACAGACTTCGTGCCATCCCAGCCTGACCTGGACACCATCCTGGAGAAAGTGA Gene GeneID:512054|SNPH:XM_002692427:411_cdna Constitutive 0 NULL GeneID:512054 13 GENE SNPH NULL syntaphilin EMBV3_17620 CAGAATCGGCCTTGTTGGGATACTTCGTAGTGTGGCCATTGTCTCCCCCTTCATCTTCCT Gene GeneID:788295|LOC788295:XM_002693210:411_cdna Constitutive 0 NULL GeneID:788295 15 GENE LOC788295 NULL similar to olfactory receptor, family 52, subfamily D, member 1 (predicted) EMBV3_43573 GGAGTCACATTTTCTAGGGAGGTAATCGTTGTGGACCTTGGAAAGGACAATCCTATGGCT Gene GeneID:100294981|LOC100294981:XM_002691373:241_cdna Constitutive 0 NULL GeneID:100294981 11 GENE LOC100294981 NULL hypothetical protein LOC100294981 EMBV3_09892 CCTCCTGCAATTAACCAGTTCACCCAGGCCTTAGACCCACAAACAGCTACTCAACTGCTT Gene GeneID:613534|RPL7A:XM_002688208:85_cdna Constitutive 0 NULL GeneID:613534 6 GENE RPL7A NULL ribosomal protein L7a EMBV3_04362 ACACATGGGAATCAGGGCACCAGGACCTATGAGTGGAATGGGCATGAATATGGGCATGGA Gene GeneID:613877|MEIS1:NM_001083507:71_cdna UTR3_Alt 2 NULL GeneID:613877 11 GENE MEIS1 MGC138090 Meis homeobox 1 EMBV3_08630 GTAGGAGGTAAGAAACTATAGACATGGAGTGTAGACCCTGTGATCCTGTGGGCCTTGAGC Gene BVV0101_066629 + 1 EMBV3_26259 GK000018.2:46825749-46857106 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02041 GCCAGCACGAAAATCCAGAAGGAATGGGGTTTGGAGCTGTAGATCCACTTTGACTGCTGT Gene BVT0102_376804 + 1 EMBV3_30822 GK000013.2:30527983-30604487 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042446 TCONS_00042442 TCONS_00042435 TCONS_00042433 TCONS_00042436 TCONS_00042447 1 XLOC_025667 NonCoding TCONS_00042446 XLOC_025667 NonCoding NonCoding - 13:30540381-30542348 - TSS31590 1032 1 TCONS_00042446_1 50 0.476744186046512 2 0.476093591047813 0.00250588123177829 0.000246234222732546 0.000472197981010287 0.000674768921800212 0.00146114518878533 2.36287062526565e-09 6.39332062640274e-17 0.00215166439858723 0.00117461512708336 0 0 0 0.000115965949552377 4.1023161229471e-05 2.1379288787256e-05 0 0 0 0.00122432790387469 0.00163077324122154 0.000128091437279873 0 0 0 1.38352312843434e-19 0.000239350685038436 0.000343898735634365 0 0 0 XR_227490.1 LOC101901993 PREDICTED: Bos taurus uncharacterized LOC101901993 (LOC101901993), 3e-116 423 100.00 0.22577519379845 0 noncoding 0 0 1 1 -0.109318347485922 0.350425619257768 -0.000504413942626764 0.994849837388045 CTCTGGATGGAATCTTGTAGCAGACAAAGGACTAGGTAAAAACTGAAGACATCTGAATAAGACCCTGTCAGCTGCACAGTTCCAACAGCAGTCAAAGTGGATCTACAGCTCCAAACCCCATTCCTTCTGGATTTTCGTGCTGGCCGCCAACCAAGAACTGGCTCCAGCTGTACTGGCCCCTAATTTCTTTAACTCTTTCCTCTTCTTTATTCTGGTGTTGAGAGAGCAAAGGAGATTCATTTGCAAGTATTTATTGAGCACCAGTCACTGAGGACAGCAGTAAATAAGGCAGGTGAGGTCCCTGCCCATAGAAGCCACATTCTGAAAGATGGATAGCATCATGGCACACTTATTACTGCTAGAAGAGTTACTTGAATGAATGTTTTCATTAGTCCTGATGATGGAGATGCTAATTGTTATTCTCATTTATGAGACATAGACGCCAAATGACTTACCCAACATCAGGCAGCTAGTTAGTGATGGAGATACAATTATTTTCTTTTACTGATTTTATTTATTTATTTATTTTTGGCTGTGCTGGGTCTTCGCTGCTGCACGAGGTTTTCTCTAGCTGCAGTGAGGGGGGGCTTCTCATCGCAGTGGCTTCTCCTGCTGTGCAGCATGGGCTCTAGGGTGCGTAGGCTTCAGTAGTTGTGGCTCCCGGACTCTAGCGCACAGGCTCAGTTGCCCTTGGGCATGTAAGATCCTCCAGGACCAAGGATCGAATCTGTGTCTCCTGCTCTGGCAGGCAGACTCTCCACCACTGAGCCACCAGGGTAGTCCCTGGAGATACAACTTAAATCAAAGGTCTCAGATTCCAGAACACTTGGATTCCTAACCATGATAATATCCATAAAATTGTTCTTTTGCGTAGATACTGTCTGATTGCTGTCTTGCTCTTTCCACTCTTAAAAGTATGCTGCTTCTAAAAAAATATCTGTAATGTCTAATGACAATTATAAAAATAAAAAGTGGCTTTTTTTTTTTTTAAGAAAATGGTGCCATTCGCATTCAATAGTTGCTTTTGTAGCA TCONS_00044920 TCONS_00044921 TCONS_00044922 r 5' 12400 TCONS_00044920 TCONS_00044921 TCONS_00044922 r 5' 12400 EMBV3_09658 AGAATTCCCCAGGCGGCAGAACTGTGGGGGTAAGGCAGGCATTCTCTGCACTGAGTCTGA Gene GeneID:789168|ZACN:XM_002696171:139_cdna UTR3_Alt 2 NULL GeneID:789168 19 GENE ZACN LGICZ1 zinc activated ligand-gated ion channel EMBV3_42195 GTGGTGTGCATGAGCAATGTCAACAGGAGCATGGAAGCCCACCGCATCCTCAGCAAGAAT Gene GeneID:519104|LOC519104:XM_002693426:41_cdna Constitutive 0 NULL GeneID:519104 15 GENE LOC519104 NULL similar to hCG1991759 EMBV3_11306 AGGGAAAGGGAAGGAGGGAGAATCTGATCGACGTCACAGCAAAGGATGTAACTGCAAACG Gene GeneID:100139053|LIN54:XM_002688384:34_cdna Constitutive 0 NULL GeneID:100139053 6 GENE LIN54 NULL lin-54 homolog (C. elegans) EMBV3_05798 TGCTGAACACCAGCGAATTCACCAGGTAGAGAAAGCCCCCGGAGATGATGAGGAGACAAA Gene BVT0102_057953 + 0 NULL GK000013.2:75888891-75950840 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043994 TCONS_00043998 TCONS_00043997 TCONS_00043999 TCONS_00046298 TCONS_00043996 TCONS_00043995 TCONS_00044002 TCONS_00043993 TCONS_00044001 2 XLOC_026092 XLOC_026679 Coding TCONS_00046298 XLOC_026679 NonCoding NonCoding - 13:75936791-75944113 - TSS33604 2667 2 TCONS_00046298_6 65 2 0.635978691435596 0.117355573174621 0.122232725008256 0.0960433040590683 0.0785399046873406 0.0821604184298345 0.0394090177219596 0.0741836450351765 0 0 0.00579910729096193 0.00169290018313826 0.00200233211851379 0.0153187981918433 0.0292183985001509 0.0247064269553073 0.000569822662372346 0.00104645035008147 0.000159934387645263 0.144802068640341 0.126849004645232 0.041004998188019 0.000124048933140446 0.000594904107218173 0.000240661332941728 0 0.10114963463578 0.0723688234056042 0.000631243961194652 0.000359370072112038 0.000838246734222869 XM_005192523.1 LOC101910051 PREDICTED: Bos taurus zinc finger protein 629-like (LOC101910051), 0.0 682 100.00 0.141357330333708 XM_005259769.1 ZNF681 PREDICTED: Homo sapiens zinc finger protein 681 (ZNF681), 2e-59 235 67.41 0.267341582302212 0 noncoding 0 0 0 0 -1.68952306803043 0.0291619004466073 -0.356673883506427 0.00498675014719667 TGTTGGAAATTCTTAATATATTTTAAACACATAGAATAGTTTCCATTTAGGTTGAGTCTAAACCAGAATTTTAAAGACCAAAGGAGTAACTGCCCCATTTTTCCCTCCTTACCCCAGTAACCATTTTACATTTTCATAATTGCATTGATCACATTTATTTTATACTCATCTTTTAAACTTATTCAGTTGCATTTTCATTGTATATATAACTCAACAGACACATAATTTTATAGGTTATTTGCAAAAAGTGAGCTTATGTCCATACCCTTTCTTAGAGATTTAAAAAAAAGCACATAAGGAATGAACATGGGATGAGGAGCTGCCTCCAATGATTACACAACAATTTAGCCATGTGGCAGCCACTATAATACTCTAATATCTGGGAAAGCAGAGGTCAGAAAGATGAGAGAACGACCCACAAAGAAGAAACTGAATGTTTTCCATCAATTTCTATGGCTTGAGAGCAGTGCTAAAGAGACGTGTTCGACTACGCCCAACCCCACTTGACTGAACAGGGCTAAGCTGCCACCAATGATTATGGGAACTGATTCAGAAAAGTGTAGATTTCTGACACAAGACTTGAATGTATGCAACATTTCCCACCAGTGTTAGCAGGCCCTAGAAAACTTGTGACTTATTTATCAGGGAACACAGGAAATCAACTTATTTTGAATAACACTACTATGGATTCTCTAAGTCCTGAATCTAAGTCATAGAATTGTTGCCATCTCTCCGTCTCCTCTTGGTTCTCTGGATACATTCAATAATGGTGCCAACTGCTCCAGGAAGCTGGATGTCTATGAATTCTATCCGTCTAGACAAGGAGCAGAAACATTGTCTTGTAGCCCAGTGACCCACCATCTTTAAATTTCTCATGTCTTCCCTCTTAACTTTCTTTTAGGTTTTTAAATAATGACCCACCTTTTGTTTTCATTGTCCACTGGCAACGTTTCTTCTTCTCTGAAGTTTTAATTCCAAAGAAATGGCTTTTGTGGTCCTGACTTACGCCTAGATCAGAGTTGTATCCCCTCCACACAAAATAGAGAGCCACCTCTGTTAAAACTAGGATTTTACTCATCCAGTGAAAATACATAATGAACAGTCAGCAAAGTGAGTCTGTTCTTTTTACTCCACCCTCAAGCTGCCTGTGAGTCTACTTCCCATCATAGGAACTGCCGTTTTCAGGTTCAAATTTTGCTTGGGCACGTTTAGCTGCTTTTGCTCAAAGAACTGAGTCAGTGAAATACAGAAAATATGTCTCTGATCGCATCTCCCCGTTTCTTCAACTTGTATTTAAATTTCTAAAATATTCCACACAGGATGAATTCATGCAGAAGAATTGGACTTTGGCTAACACCCTTTCCACGTTGATCTCTTTGGTTTAGATTTTCGATTTCTAGTAAAAGGTAAGTGATTTCTAAATGCCTCCCTGCCTCTTCTACAGTCAGGGTTTCTTTTTATCATGAGTTTGCAGATGACGAGACAGTTTCGAATTTAGACTGAACGCTTTTCCACATTGATCACATACAAAGGGCTTCTCTCCAGTATGGATTTTCATGTGCTTACTAAGATTTGAACTATGGTTAAAAGCCTTTTGACATTCACTACATTTATAAGGTTTCTCTTCAGTATGAATTTTTTTATGTCGGTTAAGGTCAGAGTAATAGCGAAAGGTCTTTTCACATCCGTCGCATGAAAAGGGCGTCTCTGGCCTCTCTTCAGAATGACTTTTCTGGTGTCTAATAACATTTGACTGATGTTTAAAGGTTTTTTCACAAACATTACACTTGTAGGGTCTCTCTCCAGTATGGGTTCTTCGATGTCGCGTTAGATCTGAAAAACAGACAAAGGTCTTTTTACAATTATCACAGCTGTAAAGTTTCTCCCCAGTGTGGATTTGTTTATGACGCTTAAGATCTACGAGCTGGGTAAAGGTCTTCTCACATTCATTACATGAAAAGGGCTTCTCTCCAGTATGAATTTTCTGATGCTTGTTAAGATTCGATTGGCTTTTAAAGGATTTTTCACAATCATTACATTTGTAGGGTCTCTCTCCAGAGTGAACTCTTTGATGTAAGAGAAACTGTGAATATGGGTTGAAGTCCTTTTTGCAGTGATTACATGTGTAATATTTCTTTCTAGTATGAGTTTTTTGGTGTTGAATTTTTTCTGAGAAACTGTGAAAGGCCCTTCCACAAAACCTACAGACAAAGAGTTTCTTTTGTGTGGGAGTTCTTTGATGCTGAGTCAGCTGTGGTCTCTGGCCAGCATGAAATTTCTGATGAGTAATCAGGGATGAAAGAAACCGGAAGGCCCTCTGACACACGTCACACTTGTGTGGTTTCAGTCCGCTGTGTGTGCTCTGATGTTGAATGAACTTTGAAGCTCTGTTAAAGGTTTTGCCACACTGGTCACATTCAAGGTGTGTATCCAGAGTATCGATTCTTTGGCACCTTGGAAACGATGCTCGATGCCTGAAGGCCTTTGTCTCTTCATCATCTCCGGGGGCTTTCTCTACCTGGTGAATTCGCTGGTGTTCAGCACGTTGCGAGCTATAACTAAACACCATGCTGCAGTCGTCACGTCACCTCTTTCTCCAGCATCCAGGGCTCCTTCCCTTGCCTCAAAGAGGACATCACTTCTGCTTTGTAAGCCCAGCGTCCTAAG TCONS_00046299 s 3' 13966 TCONS_00046299 s 3' 6728 EMBV3_12404 GCGAACGCTGTTTACAGTTTTGCACAGTGGTCTTCCCCATTGTCCACTCAAGTTGTGGCC Gene GeneID:521413|GRK6:XM_002689020:61_cdna Constitutive 0 NULL GeneID:521413 7 GENE GRK6 NULL G protein-coupled receptor kinase 6 EMBV3_07636 CACCAAGTACATCTCCTTCGAGGAGCGGCAGTGGCATAACGACTGCTTCAACTGCAAGAA Gene GeneID:510008|FHL2:NM_001046046:17_cdna Constitutive 0 NULL GeneID:510008 11 GENE FHL2 MGC137365 four and a half LIM domains 2 EMBV3_43473 GTCACGGAAGCGCCTCAGCCAGGACACCTATCGGCGCAACAGCGTCCGTTTTATGCAGCA Gene GeneID:281345|NCF1:NM_174119:41_cdna Constitutive 0 NULL GeneID:281345 25 GENE NCF1 NULL neutrophil cytosolic factor 1 EMBV3_41751 CTTCTGTGACCTTGATGCCCTGCTGAAGCTCTCCTGCTCAGACACATCCCTCAACAAACT Gene GeneID:514546|LOC514546:XM_002691555:4_cdna Constitutive 0 NULL GeneID:514546 11 GENE LOC514546 NULL similar to Olfactory receptor 1J4 (Olfactory receptor OR9-21) (HTPCRX01) EMBV3_16454 GGACAACAGTGAGGTACCTACGGGAGAGCAAATGTTAATTTCATGCTTCTAGCGAGAACA Gene GeneID:282661|CD47:NM_174708:38_cdna UTR3_Alt 2 NULL GeneID:282661 1 GENE CD47 IAP CD47 molecule EMBV3_27220 TGCAATTCTAGGCTGGCAGGGGTCCCACTGTCCTTGGCATTCACCAGCAATAAAGCTCCA Gene GeneID:100335204|LOC100335204:XR_083657:86_cdna Constitutive 0 NULL GeneID:100335204 4 PSEUDO LOC100335204 NULL mCG141481-like EMBV3_01376 TTTTCCCCCTGCAGCTCATAGAGAAATGTGGCGCCCTTTAAATGCAACCTTGGTGATCAC Variant GeneID:613527|CTNS:NM_001102264:165_cdna 130^208 3 EMBV3_02000 GeneID:613527 19 GENE CTNS MGC166375 cystinosis, nephropathic EMBV3_25419 AACACAGGGGCTCTCTGAGTTCACTTTTTTGCCTGGGCTTCTAAGACCCAATCGGGAAGG Gene BVT0102_202022 + 0 NULL GK000015.2:51435106-51455096 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206461 1 XLOC_124983 NonCoding TCONS_00206461 XLOC_124983 NonCoding NonCoding - 6:1924608-1925159 - TSS153968 551 0.996370235934664 1 0 0 0 2.39928292931797e-06 0 0 0 0 0 0 6.22276560471008e-07 0 2.03204732264941e-06 4.33952280113908e-07 0.000110111004217626 8.64009618908886e-05 8.61114630547373e-05 2.73919807434763e-06 3.83455531141316e-05 0 0 0 3.06763863345588e-05 2.58071773962373e-05 7.75759860972711e-05 1.39715241169306e-06 0 9.66697428473043e-07 0 6.24080793822373e-06 2.72787840061718e-06 XM_005200729.1 LOC101906009 PREDICTED: Bos taurus uncharacterized LOC101906009 (LOC101906009), 2e-76 289 84.79 0.475499092558984 0 noncoding CATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACATTGCCGGGGTCCAGCCCCAGCAGGATCTAGGGGTACCCTCAGGATGACAGCCAAGGCGATAAGGAAAGTAAAAAGGGAAGAGAAAGAGGCTTGATCTTCCTTGGTTTACACAGAAAGCCAATAAAGCTCCTGGCACGGAATTTGCTCTATTCACGGAGGCCACAGGCGCCCTCTTGGTGGGGTGAGGACGCAGGACGCCCCCTCCCTGGTGAAGATGCAGGGTGCCTTCCCAATCGGGTTTTAGAAGCCCAGGCAAAAAAGTGAACTCAGAGAGCCCCTGTGCCCCAAGGAGTCATCCTGAAAGAAGAACAGAGAGAGAAAAGGAAAGAAAAGGAAAAAAAGAACGACACGGGGAGACCAAGCTTCAGTGAGTGAGGCCCATAACTTTATTTTCAAAAGGAACTTTTATACCTTGACTTGTACATAGAGGGAAATGAAAGATGCAAAGTCATACAGAGTCAGCCCAAACATTACATCTGTTTTGTCTTTATCAAAACCAGGATTTTTTCT TCONS_00202289 . 5' 22688 TCONS_00202289 . 5' 22688 EMBV3_21886 TTGTGCTTGGCACTCCTCTCTGTGTTTGGTTGGTGGATAACTTGACCCTGCAGAGCATGC Gene GeneID:509630|LOC509630:XM_002689928:67_cdna UTR3_Alt 2 NULL GeneID:509630 8 GENE LOC509630 NULL similar to without children CG5965-PB EMBV3_42487 GGCAACAGATTGGACTCAGCTACCTCAGGTTCTCCCAGATTTGTCCAAAAGCCATGAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41778 CTCAGGTTATTAAAGCTGCCCCAGCCACGAAAACAAAATACTGGCCAGATCACTCATGAC Variant GeneID:509115|MRPS7:NM_001034343:368_cdna 272^335 1 EMBV3_37469 GeneID:509115 19 GENE MRPS7 MGC127881 mitochondrial ribosomal protein S7 EMBV3_36689 TAGCAATTAACTTTCCCGTTTAACTGGTTGTGTGCGGTTTTGCATATACAATCAACCCTA Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_20590 CATTCTGTCCAGTATCCTCCGTATCAGCACCACAGAGGGAAGGTCCAAAGCCTTCAATAC Gene GeneID:505546|LOC505546:XM_002699202:89_cdna Constitutive 0 NULL GeneID:505546 29 GENE LOC505546 NULL similar to olfactory receptor, family 8, subfamily A, member 1 EMBV3_37972 ACTGTGATACCGTCCCTCTGTTAGCATTGTCTTGCTCTGATGCTTCCTTTCCAGAAACAG Gene GeneID:100336901|LOC100336901:XM_002693680:322_cdna Constitutive 0 NULL GeneID:100336901 15 GENE LOC100336901 NULL olfactory receptor MOR185-2-like EMBV3_03726 GTTTTGCTTTTGGAATAAGGAGGGTGTCACCGGACAGAACCTGAATGAAGCTGCTTGGGG Gene GeneID:280815|NPC2:NM_173918:5_cdna Constitutive 0 NULL GeneID:280815 10 GENE NPC2 HE1 Niemann-Pick disease, type C2 EMBV3_35491 CCTGGTTCTTTTCCTTAACCTGGGGATCTTCATCCCTCTGATCATGTTTATGCTGGCGGC Gene GeneID:530866|TAS2R39:XM_002687117:457_cdna Constitutive 0 NULL GeneID:530866 4 GENE TAS2R39 NULL taste receptor, type 2, member 39 EMBV3_25506 CCTGTGGGTTGGAACCTTTGTCTCTTGCAGTTTAAGGTAATGGATATTGTAGCCCATCTG Gene GeneID:541130|UBE2N:NM_001076258:40_cdna UTR3_Alt 1 NULL GeneID:541130 5 GENE UBE2N MGC139855 ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast) EMBV3_02779 CGCGTTAGTAAGCGTAACCTTGAATTGTCAGGCTGGAAGGAGTTGCTGTAGTCTGTACAT Gene BVT0102_021956 - 1 EMBV3_19405 GK000024.2:58790833-58797002 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140702 TCONS_00140700 TCONS_00140701 1 XLOC_085194 Coding TCONS_00140700 XLOC_085194 Coding Coding LMAN1 24:58793972-58810943 j TSS104954 4182 1 TCONS_00140700_1 296 10 0.754154390100177 0.000662806332095505 0.000138937217882795 0.000225116991065364 0.000276102178999642 0.000534693528319311 8.80385654839754e-05 4.81100642635994e-05 2.74328272956444e-05 0.000356825872577381 3.05465336741187e-05 1.24079468011441e-05 2.00608565721984e-05 0.00011543344113456 2.92228192311838e-05 2.70345167932067e-05 0.00706679310380568 0.00418625969379205 0.00774761726675595 0.000408000459705515 0.000473637415225587 0.0001685684393798 0.00209370993963649 0.001015630587647 0.00424770047439093 0.000622093798039533 0.00127896378320867 0.000449144464095842 0.000113852716390322 0.000226639100329517 0.000128516318529402 NM_001098943.2 LMAN1 Bos taurus lectin, mannose-binding, 1 (LMAN1), mRNA. 0.0 2071 99.91 0.275227164036346 NM_005570.3 LMAN1 Homo sapiens lectin, mannose-binding, 1 (LMAN1), mRNA. 0.0 1871 83.72 0.419894787183166 TCONS_00140700_1 sp|Q9D0F3|LMAN1_MOUSE LMAN1_MOUSE Protein ERGIC-53; 0.0 535 90.20 0.996621621621622 1 coding 0 0 0 0 -0.146195083210985 0.480239341699127 -0.00682868419397622 0.88741548214331 GACCATCAAATGATGGTGCTAATCAAGCTTTATCAAGTTGCCAGAGGGACTTCCGTAATAAACCCTATCCTGTCCGGGCAAAGATTACGTATTACCAGAAAACATTGACGGTAATGATCAATAACGGCTTCACACCAGATAAAAATGATTATGAATTTTGCGCCAAAGTGGAAAATATGATCATCCCCGCCCAGGGGCATTTTGGAATATCTGCTGCCACTGGAGGTCTTGCAGACGACCATGATGTTCTTTCTTTTCTGACTTTCCAATTGACTGAGCCTGGGAAGGAGCCACCTACAGTTGATAAAGAAATTTCTGAAAAAGAGAAAGAAAAGTACCAGGAGGAATTTGAGCACTTTCAACAAGAGCTGGACAAAAAAAAAGAGGAATTCCAGAAGGACCACCCCGACCTTCAAGGGCACCCTACGGATGAAATGTTTGAGAGTGTGGGAGACCGTGAGCTGAGACAGGTCTTCGAAGGACAGAATCGTATTCACCTTGAAATCAAGCAGCTGAACCGACAGTTAGATATGATTCTCGATGAACAGAGAAGATACGTCTCTTCCCTGACAGAGGAGATCTCTAAGAGAGGAGCTGGAGCCCCAGGGCAGCAGGGGCAGACCTTTCAACAAGAACTGGATACTGTTGTGAACACTCAGCATGAGATTCTGAGACAAGTAAACGAACTGAAGAACTCCATGAGTGAAACTGTCAGACTGGTGAGTGGCATCGCGCACCCTGGGCCGGCGGCGGGCGTGTACGAGACCACCCAGCACTTCAACGACATCAAGGAGCACCTGCACATCGTGAAGCGAGACATCGACAGCTTAGCACAGCGAAGCATGCCATCAAACGAAAGACCGAAGTGCCCAGAACTACCACCATTCCCATCGTGTTTATCTACAGTGCACTTCGTTATATTCGTCGTGGTACAGACGGTGTTATTTATCGGTTATATCATGTATAGGACTCAGCAAGAAGCAGCTGCCAAAAAATTCTTTTGACCACCATTTTCATGTGTACATCATGTATGTATGTACAAAATGTCTTTTTGAGGGAATTTAAGTATTTAAATTGCTTTTTAGTCTAAATTATTTTGTATAAAATAACTGTTTAAACATTGACTTAAGAATAAACCTTAAAGACAACCACATGTAAATTTGTGCATAGTACATAAATCTATTTAAATTTCAGTGAATTTCTGGCCAGTAGAATACAGCCACTGCACAGAATATTGGTAAATCAGAGGGTTAAAAAACAGAAAGGGGGAACCCCCATCTATGAAAGTAGCCCGTAAGTCTCTAGTGTTGGAGATTTCTGTCTTTAGCATAAATGCCCTCGCCCTCCTGCCCCCAAAGTATGAGGTCTGAGAGCTACCCATCATGTTTATTTTGTAACCAAAGTCTTTTTTTTAAGAGGCCAGAATTTCCTGTTCCAAGACTCAGTGCTGCAGTCCTTAAATCTAATACAGCTCCCTTTGAAATCAAAAAATATTTTGTCTGAGTGTTAGGATCTGGGTAATAGGATTCAGAATGTTTATTAAAGCATTTTTTCCCCTTCTGATCATCAGTGATATATTTCACTTTTAAAGGAAATTTGGGGGGAGAATTAAGAGCTGCTCTTTGCCTGAAAAACCATTTAGGTGGGAACATTCCTCTGATGATGGTTTTTATGGGTCTTTTACCTGGTGAGGTGTTCATTTCATGATTGCTCATATTCTTGAATGTCTGTGTTCCAGTGGAGTCAGTTCAAAATTACAAAACTCAGTCTGCCTCCGTATCTCTAAACCCACCTCGGATGGCGCGTGCTGAGGACACTTGAAGGCCACAGCACCTGCCCCTGCCTTCAGGCTGAGTCGCCCCACGCAGCGCGGCGGCGGTGGCACTGCGTGTTAGTCGCGAGAAGGCAGGAGCAGCAGCAGTGTTAAAGTTTCTGAAAGCAAAATCTGAAAAATAGTGTTATTACTTCTGATTTCTTTGTTTTAATGCCAGAACTAGGGGTATTGTGAAGCACGCGTTAGTAAGCGTAACCTTGAATTGTCAGGCTGGAAGGAGTTGCTGTAGTCTGTACATAGTTCTAGGTATTATAGAGACTGTCTGTAAATGACATTTAATTTAGTTTTCATAGCTGATGTAGACTTCAAAATACTCTTACATTCCCTTGTCTAGCTAGCTAAAATGATGCCTTTCGTTTGTCATAGCACTGAAAATAGTGCTGTTTAATTCTTCACTGCTTTCAGAAATTTGCTCTGAGTTGTTATTTGCTGATTGGACTGCCTGCCTAAAACCCATACAGAGACTCTGAAGAAGTCTGCATTAGAGCAGTAGCTAACGAGTACTGCATATGCAGACAGTCCTAGCATTGCTTTTTACAAAGCATTTATCCCAGAACACTGAACAAGAATATTCTATTGATGACTCACACACTTAGGACCACTTCAACATAGAACTGCTCCACAGGTTTTTTTTTTTCTTGTAGTGTTAACATGTTGAAATTCATATTTCAGAGACATCATCATGACAGAATTTACTCTTATTCCATGAAAAAAAATTAATACTTTCAAAAGAATGTTTCAGTTGTAGACTGTGAGACTTGGAAATCCTCTTGAGATGAAAAAGCTGCAGAATATCCAGTATTATAAAAATCCAGAGCCACGTGTGCCTGAACTTAAAGGAATATTAGATCTATGCAGTGTACATTTTCCAGGCTAAATTTCAAGAGGAATTGTTGCGATCATTTCTAATGCAAGTGAAGACAGCTAGGACAAAAGAGCATACGCGTGAATCTTTCTTTCTTTCTTACTAATTTAATTTGCTAAAAAAAAAAAAAATCACTCAGTAAGACGGTTCATACAAGTTATTATTGTTGGAAATTTGGTTTGTTTTCCTCAAAGTCACTGACTTCAAGTAGTTCATTTCTGTTTTTTAAAAAAAGGTGTTTGCTATGTGGGAAAATCAATCACTGCCAGGATTCTCTCATTTCTGTACTGTTTTATAGAATTGAATTTTAACTTTTCTCACACCAGCAAGTATTTTACAGGTGCCTTGGATTAAAACAAAGTCGATTTTACAATTTTACTGTAAATCTTTGTGCTTCTGCCACTTTAAAAAAGAAATGCAATTGTATGATGGTTAATACTCTTATTTAATCTGCCTTTTGCGTTCTGAGTGTTTGAATGTTTTATTCGGCCTGAACTTTCACTGTGAGGGCACGGTATTCTGTCACATAGTAAAGAGACATCAGTGTTTCTCAGAGTGAGGTCTGTGAGCCCTCTGAGTCCTGGAGCGCTTGTGAAGAACGCAGATGCCGGAGCGCCATTCCCCACCACCTGCATCAGATCTCCGCAGTGGGAGCTGCAGAGAATCGTTTTCGGCAGGTGACTCTGAGCGCACTACTGTTTAACAACCACTGAGACGAGGAGGGGTGAAAGAAACACGGGTTTGTGTAGTTTTACAGCTGAGCTGAAAGCTAACGTAACATTTTCATCGTCAGCGACATTAGCAAATGTGCACTGATTCTTTATACTTAGAACTTATTACTTAACGTTCTTTTCACCGAAACGCTTGGTTTATCAGCAGCTACAAACTAAACCCAGGTTGCCGCCTGTGGCTCGCGGTACTTTGGTTGACGGCTCTTACAAATCATCTTCAGATCATGGTCGAGCCATGGAAACCCCCATCTTCGCGTCTGCCTGCTAGAGCGTTTGCTTTTCCTGATTGTGGTTTTTGTGACATTTTCTCTCAGACAGTTGTACTTTTTGATAACTTGGGGAAAACAAAAATTACTTGAATAAGGGATTGCCTGACCCGCTGCATCGCAGGGACACAGTCTTTGTAAAGAACGTAAATGACAGTTGTGAATATTAAGATGTGATTATCTTTTTCCTGTCCATGTGCTCATTGCAGGGAGATAGTGAACAAATGATTATACTGGGGATTTTTTTATTTATAAGATCTAATGTAAAATCACCACTTGCAACTTTTTAGATCTGTATGTTGCCTGTTTAATATATTCTTTTAACATTTAAAAGGGTTTTCTATCCATTGTTAAATTCAGTTAGGTGACATTTCGTCGTGTGTTTTTTTTTCCTGATTGTTAATTTGATGCTAGCTGGAATTCAAAAGATGACATTGACCTTATTCAAATAAAGAAATATTTTAGTAAACTTAACTTTTTCCTTCA EMBV3_43441 TATCTGTGATACATGACCCGGCTAAGGACTCTGGGTTTGCTGGGGCTTCGAAACACTAGA Gene GeneID:521857|TRIB1:NM_001101105:41_cdna UTR3_Alt 2 NULL GeneID:521857 14 GENE TRIB1 NULL tribbles homolog 1 (Drosophila) EMBV3_13009 TAGAGCCTGGAAGCTGCAATGAACGAAGCCACTGCAATGAGAAGCCCTCATACCGCACTT Gene BVT0102_390689 + 0 NULL GK000023.2:41467563-41522597 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133459 TCONS_00133462 TCONS_00135217 TCONS_00135218 TCONS_00133463 TCONS_00133461 TCONS_00133460 TCONS_00135220 TCONS_00135219 TCONS_00133464 2 XLOC_081115 XLOC_081661 NonCoding TCONS_00133459 XLOC_081115 NonCoding NonCoding - 23:41484624-41487134 - TSS99663 2510 4 TCONS_00133459_5 77 0.286852589641434 1 0 7.88306410037472e-09 0.00102578125815367 2.80438913225041e-08 0.000190245620334003 3.20720990452887e-15 1.41157055502334e-05 0.000342297951541908 3.94364461075901e-09 0.000320401762297568 3.47364714675594e-10 2.03163290523902e-10 3.75350143157529e-10 3.34362877155143e-06 0.000286722030723261 9.63760220676369e-06 0 0 0 0.000945081209666472 6.89838243640435e-16 0.000730335232810327 0 0 0 0.000859511248914646 0.000305628282830385 0.000475286174630272 0 3.90974817426087e-10 0 XR_228731.1 LOC100294820 PREDICTED: Bos taurus uncharacterized LOC100294820 (LOC100294820), 8e-64 250 72.44 0.186852589641434 0 noncoding ATTCAGTCTGCCAGTTTGTATTTTCAAGGAATATTTTAACTGTTGAGGGACTTTCCACGTCCCGTCCTTTAAATGTGCCCTTCAGATGCCAAGGAAGGCCAAAGCCATCTTGAACTAGTCGTTTCTTTTACTGACTCAGCAGGACCGCAACATATAAGTCAGTCTCTCAGGGGCTGAGAGTCTTTAGAACTTCAAGGGTCTGTGTTCCATTCTTATTTATTGAGCGAGACAATGCATGGGGGAAGAGTAATAGAAGCACTTACTTTGAAGACCTAGGTGAGGATGAACCAGAGGCAAGGGAGTGCTCAGGAGAAATCGGGTGGAGGGTCAGTGAGGGCTGGAAGACAGCGGAAGGCCGAGGATGCGCCATCTCTCTGGGGGACACAGTGGGTGGATTGGCAGGAACTGCAGGAGCTGTGGGTGGAACAGATGGTCCAGGGTCAGGAAGCAAGTTCTATTCTGTGTAGGGTTGCGATAAAGGGTATTCAAACAGGGAAATGAAGCAGGAGGCCGAGCATACCCGAGAGGAGGGTGTGTAAAGGTCAGGAGCCTGTTTGCCTACACCTGGCAGCAATTTGCAGCGATTGTCTGAATGCCACGCACAGAAGGATTGGAAGAGTTCCCAGCAAGGACAGGTGAGGTTCCTTACTTTATCTGAGATAGAGTTTCTGGCCGGGAAGAAGGTTACAGGCAGGGCAAGTGCAGTCAAAAGCATGGAGCTGGAATAGACTTTTGCAATGGACTAGAACAGTTCTCATTTTGGAGGTGAGGGGCTAAAGCTTCATTTAAAATGTAGGTTATTTAAGGTCCCAAAGCCTCAGCTTGTCTGTAAATTAAAAGGTTCCATTAGAAGGAACCTGCCAGGGGCTTCCCTGGTGACTCAGTGGTAAAGAATCTGCCTGCCAATGCAGGAGACACGGCTTCCATCCTTGATCCAGGAATATTCCAGATGCCGTGGAGCAACTAAGCCCATCTGCCACAACTATTGAGCATGTGCTCTAGAGCCGGGAAGCTGCAATGAACGAAGCCACTGCAATGAGAAGCCCTCATACCGCACTTAGAGAAAAGCCCGTGAAGCAACGAAGACCCAGCACAAAGTTAAAAAAAAGAGGAAACTGCCATATTGCTAACACGGCAGCAGGACACAGATCTTGTAACTGAGTAGGACCCCATGGGGCCTTCCCAGAACAGGGCTTCCCTCCTATCCTCTGCTCTAGCTCCTCTCTGAAGTATCCAGATAATAGTATTTGATGCACATTTCCTGGATTGTTTGACCAAAGTGAAAAAAAACCTCCCCTTCTCCAACAAACGGAAGATGTTAACTACTTGAGGACCAAGAGCATACAGCCCCAGGCCTCCTAGAGCCTAAGGCCTGATAATGTTACCCCCTGTGACACCATTCTGTTACTTCTCCATCAGGCTGTCAGAGAACAAGTTGATTACAGACCCTGCGACACCTCCTCCACCAAAACCTGGCTTTTCAAAGTGCTTGGCTGAACCCCTTCAGGGAGCTCTCGGGGCTTTGAAGGACGCGAGCAACAGTCTCCTTGCATGGCCCTGCAATAAACCTTTCTCTGCTCCAAAATCCGGTGTTTTAGTTTGTTTGGCCTGACTGTGCATCCGACGTACGAATGGATGGTCATCTCTCCACTGCCCTGTATCCGCATCTAACCTCTCTTAGAACTGCTTTGCAAATTAGCACTTTTCCATATCAGGCGTCTGGAAGACAGACAAGATACGGTCTAAAAGCCATGATGCTATGAAGAAGCAACAAGCTAATAATTTTAGAGAAAGACTCTCCAAATTATCTGGCTAGTGAGTGGCTGTCTGGTTTGGGAGAGGACTTACGCAGAGGAGCAAACACGAGCCTGGTGCTGGAACCAGATGCCTGTGCCCGTCATTCTTTGAGTAGCAGCCCCTGTGGGATGCACACAAGAGCCGGGCCATGGGATTCCTTGATCGAGAAAAACAAACAGCAAGGGCTTCATGAAGAACCTTTTTTGTACCTGTTGACGCCGGAGTCGAGTGAGTGATTTCAGGGCGTCTAAATGAACCTCTGACTGTGTAGAGACTTGTTTCAAGACCAAGCTTCACAGGGGCAAGAGGGGCAGCAAGGTGTGAGAACGAATGGGCAGCAGGCACTGTGCCTGCTGGACGGCAGCGCCCGCTGGATGCCAGCGCCCGCTGGATGCCAGCGCCATCTTGTTTTTCATGGGATTTCTTCACTCATTCAGCGCAAAGGATACAACGTCTGCAGCATCTTCTGAACCTGGAGGGACGGGGGGCATTCAAGGTAGGTCCCTGCCCTTAAGAAACTTATGCTCTATAGAGAATCCCAAGACGTAGATTTGAAGCACTCGGGAAATAATTACAAGGTAGCTCACAATTTCTCCTCCTCTGAGGTAAAAGATCAAAAGGGCTGTGTTACAACGGGTCATCGTGTTGGTGCCTGTCTCAGTTGCCCAAGTACTCCGGAGGCATTTGGACTGGAGGGGAAGGGGGGCCAGGAC TCONS_00135212 r 5' 89154 TCONS_00135212 r 5' 89154 EMBV3_35354 AGCTCAAGGAAAACATACACTTTTGATATGATATGGCCAAACCGGCACTGGAAAAACCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21366 TACTCCCTGGAAATCCCCATCAGGTGTGAACCCGTATGATTCACTCTTTTCACTTGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11861 GTCGCCAACAAATTTCTCAGAGGGCAAAACCTGGAAGACTTTTGGAAGCACATACCGAGC Gene GeneID:287013|COL11A1:NM_001166509:38_cdna Constitutive 0 NULL GeneID:287013 3 GENE COL11A1 NULL collagen, type XI, alpha 1 EMBV3_41843 AATACGAATTTGGTTGCGATCTGGAGGGGGGGGAGGGAGCTATTATTGAAGGATGAGGCA Gene GeneID:536328|LRP6:XM_002687783:47_cdna Constitutive 0 NULL GeneID:536328 5 GENE LRP6 NULL low density lipoprotein receptor-related protein 6 EMBV3_25845 GTTGTCAGCCATAGCACACATCGGACATTTGGAAAACAGCAGTGGCAGCAACTCTATGAC Gene GeneID:100299038|LOC100299038:XM_002699681:2_cdna Constitutive 0 NULL GeneID:100299038 X GENE LOC100299038 NULL similar to eukaryotic translation initiation factor 3, subunit M EMBV3_03217 TTCAGTGGAATTCAGTTAGCGATAATGGAGCACAAGGAGCTGTTGAAGGTGCCCTGGGAC Gene GeneID:528177|SLC35F1:XM_002690083:14_cdna Constitutive 0 NULL GeneID:528177 9 GENE SLC35F1 NULL solute carrier family 35, member F1 EMBV3_35941 GAAAAGTACCATGAGAAAGTGGGGCCTGTCTTGAGAGGGCAAACAGGAAGGAGACAGTTC Gene BVT0102_100765 + 0 NULL GK000003.2:35210450-35428057 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12798 TAGTTTTGATAGTTTGTTTTATTGTTTGGATCTGCACAATTTGGGTTTTGCACAAAAGTC Gene GeneID:539445|MST4:NM_001163786:4_cdna Constitutive 0 NULL GeneID:539445 X GENE MST4 NULL serine/threonine protein kinase MST4 EMBV3_05430 ACCCTGCTGTCCTTGAGAGTTCTCCCAGAGTTTAAGAAGAAAGCTGTATGGACCAGAGCC Gene GeneID:506199|KIAA1797:XM_002689543:10_cdna Constitutive 0 NULL GeneID:506199 8 GENE KIAA1797 NULL hypothetical protein LOC506199 EMBV3_19832 AGTTTCTGTAGGCACTGGGCTAAAACTATGTACGTGATCCTCGTGGCAATCCTTGGGGAG Gene GeneID:281760|FABP5:NM_174315:1_cdna Constitutive 0 NULL GeneID:281760 14 GENE FABP5 MGC128055 fatty acid binding protein 5 (psoriasis-associated) EMBV3_29532 CGAGGCATAAGATTACGGTTCCTGCCTTGAGGAAATTGTGGAAATCATAGTGCTGTTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04908 CAGGTTGTACGAGGGCACTACAAAGGGCAGCAAATTGGCAAAGTAGTCCAGGTTTACAGG Gene GeneID:337890|RPL26:NM_001015512:445_cdna Constitutive 0 NULL GeneID:337890 19 GENE RPL26 NULL ribosomal protein L26 EMBV3_10475 ATGCACAGAGGATAATGGGGGAAGGGGTAGAGTCTTGCAGCAAACCAGGCTTTCTTCCTG Gene BVT0102_249184 + 0 NULL GK000013.2:52511307-52563656 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023551 TCONS_00054728 TCONS_00204180 TCONS_00011558 TCONS_00220136 TCONS_00250272 TCONS_00132405 TCONS_00009395 TCONS_00019267 TCONS_00010745 TCONS_00138406 TCONS_00018727 TCONS_00226782 TCONS_00229177 TCONS_00148378 TCONS_00188655 TCONS_00206254 TCONS_00186861 TCONS_00135618 TCONS_00189837 TCONS_00151311 TCONS_00110358 TCONS_00058128 TCONS_00167486 TCONS_00186919 TCONS_00056822 TCONS_00046799 TCONS_00021459 TCONS_00206255 TCONS_00229178 TCONS_00091564 TCONS_00160954 TCONS_00070495 TCONS_00229179 TCONS_00057018 TCONS_00166135 TCONS_00011993 TCONS_00243110 TCONS_00122090 TCONS_00057884 TCONS_00035886 TCONS_00120346 TCONS_00118479 TCONS_00091893 TCONS_00197076 TCONS_00087961 TCONS_00116161 TCONS_00235856 TCONS_00089192 TCONS_00207792 TCONS_00098489 TCONS_00116721 TCONS_00252994 TCONS_00149464 TCONS_00118516 TCONS_00171864 TCONS_00039279 TCONS_00100335 TCONS_00125023 TCONS_00202228 57 XLOC_014218 XLOC_032537 XLOC_124364 XLOC_007109 XLOC_133453 XLOC_153215 XLOC_080770 XLOC_004951 XLOC_009947 XLOC_006296 XLOC_084614 XLOC_009409 XLOC_138080 XLOC_138675 XLOC_090260 XLOC_114696 XLOC_124865 XLOC_112912 XLOC_081841 XLOC_115874 XLOC_092080 XLOC_066262 XLOC_035925 XLOC_102322 XLOC_112967 XLOC_034625 XLOC_026938 XLOC_012132 XLOC_056338 XLOC_097847 XLOC_042273 XLOC_034820 XLOC_100973 XLOC_007543 XLOC_149773 XLOC_073646 XLOC_035681 XLOC_021016 XLOC_073143 XLOC_072637 XLOC_056664 XLOC_118741 XLOC_052749 XLOC_070330 XLOC_144309 XLOC_053977 XLOC_126307 XLOC_058734 XLOC_070887 XLOC_155935 XLOC_091340 XLOC_072652 XLOC_103929 XLOC_023097 XLOC_060578 XLOC_076566 XLOC_123873 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_33971 TACTCAGTTCATGAGGACCGGCTGCAGATGACCACCTCTCTGGACAGATTACTGAGCATG Gene GeneID:518569|BPIL3:XM_002692294:1669_cdna Constitutive 0 NULL GeneID:518569 13 GENE BPIL3 NULL bactericidal/permeability-increasing protein-like 3 EMBV3_14615 CTTCTGTGCCGATAGAAAAGTTTGTTGCTGAGAAGGGTCAGCGCTATGGGACAACTGCAG Gene GeneID:521269|LOC521269:XM_002691239:209_cdna Constitutive 0 NULL GeneID:521269 11 GENE LOC521269 NULL similar to 4930560E09Rik protein EMBV3_37310 GGAATCCAGCAGGGTTTTCTGGCCAAGGATTTGCAAGCTGAAGCTCTCTGCAAACTCGAT Gene GeneID:781741|BAG1:XM_002696310:3_cdna Constitutive 0 NULL GeneID:781741 20 GENE BAG1 NULL BCL2-associated athanogene EMBV3_01979 TGCATACCTAAAGGACAACATAGAGCAATACGAAAGGGGAGGAGAAGACCTCGTGCGCTC Gene GeneID:617691|C10H14orf38:NM_001038221:223_cdna Constitutive 0 NULL GeneID:617691 10 GENE C10H14orf38 MGC133978 chromosome 14 open reading frame 38 ortholog EMBV3_28967 AAGTTGGTGATCTCGAGTTCAAATGTATCTCAGCTCTGCATTTTTACCTTTACACCCATG Gene BVV0101_055325 + 0 NULL GK000006.2:3575331-3715681 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36000 TCCTAAGCTGTTGGAAGGGGGGCACTCGGGGAATGTCTTGAGGTGTATTATGCAAAGAAC Gene GeneID:281347|NEF3:XM_002689787:16_cdna Constitutive 0 NULL GeneID:281347 8 GENE NEF3 NF-M neurofilament, medium polypeptide EMBV3_29926 TGAGCTGGAGCAAATACTCAGAACAGGGATGGGCCTTTGGGAAACAGCTATCCTTCACAC Gene BVV0102_166010 + 1 EMBV3_30474 GK000023.2:10734956-10748953 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134035 TCONS_00134040 TCONS_00134038 TCONS_00134039 TCONS_00134036 TCONS_00134037 1 XLOC_081285 Coding TCONS_00134038 XLOC_081285 Coding Coding PPIL1 23:10746605-10769743 = TSS99999 4260 1 TCONS_00134038_2 166 0.073943661971831 4 0.816052210744695 4.78209638963321e-05 1.76067525517445e-05 3.41805734202355e-05 2.49163667556183e-30 1.75934357228133e-26 5.82000057732938e-13 6.88547355354298e-24 1.46934381080576e-12 2.24747720261567e-12 2.37075356386866e-06 2.24149145375892e-05 1.23428802326208e-13 5.55706198316834e-28 0.000115381079957427 5.62660268637611e-13 0.000360182393476378 0.000393196959999235 0.000137310295672272 3.93306845588834e-07 8.15247922785102e-06 3.16825532056195e-13 0.000205689379044713 0.000135680922851189 0.000534526338834137 1.06911691513267e-08 1.09118778453208e-12 1.123440660052e-07 0.000180651843287641 0.000185120061414313 9.98785059898287e-05 NM_001014869.1 PPIL1 Bos taurus peptidylprolyl isomerase (cyclophilin)-like 1 (PPIL1), 0.0 2643 100.00 0.343661971830986 NM_016059.4 PPIL1 Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 1 (PPIL1), 0.0 1633 81.35 0.406338028169014 TCONS_00134038_2 sp|Q5E992|PPIL1_BOVIN PPIL1_BOVIN Peptidyl-prolyl cis-trans isomerase-like 1; 4e-123 348 100.00 0.993975903614458 1 coding 0 0 0 0 0.0254640119009211 0.839347603750227 -0.00798454646182613 0.864978514952084 TCATCTCTATCCCCTTCCGTTCTCTTCCTCTTCTTGGGTCTCAGCACTATTGTGGGACTAAGAAATTCTTCCAAACGTAAGGTTAGGCTTTAACTCTATTAGAAGTGCAGATTTGCCGGTCGGTCACACCCCACCCCATGCCTAAACGAACCAATCAGAGAGTCCATAGAATGGCGCGGTCCCTCTCCACTCGGAGATCACCTCCAATGGAGCTTGGCACTTTTCTCCGTCCTAGGAGACAGCTTGCTTTAGCCTCACGCTCTAGATTCTCGGCCTTGGAGGTGCGGGTGGGGGTGGGGGTCTTTCCTCTGCCTGGTCTCAAATCCCCCCAATTTTGGCATCTCTCGAGTTGAACGGCGGGAACCGGAAGCCGGTTGCAGCAGCCGCGGGTCCCGGCGAATCGACGCCGGAAGTAGCGATCGCCTCAGGAGTTTTCCGCCAGCTTCGCCATGGCGGCGATTCCTCCAGACTCTTGGCAGCCGCCCAACGTGTACCTGGAGACCAGCATGGGGATCATCGTGCTGGAGCTGTACTGGAAGCACGCTCCAAAGACCTGTAAGAACTTCGCTGAATTGGCTCGTCGAGGTTACTACAATGGCACCAAATTCCACAGAATCATCAAAGACTTTATGATCCAGGGAGGTGACCCAACAGGGACAGGTCGAGGTGGTGCGTCTATCTATGGCAAGCAGTTTGAAGATGAACTTCATCCAGACTTGAAATTCACAGGGGCTGGAATTCTCGCGATGGCCAATGCAGGGCCTGACACCAACGGCAGCCAGTTCTTTGTGACCCTGGCTCCCACCCAGTGGCTTGATGGCAAGCATACCATTTTTGGCCGTGTGTGTCAGGGTATAGGCATGGTGAATCGAGTTGGAATGGTGGAAACAAACTCCCAGGACCGCCCCGTGGACGATGTGAAGATCATTAAGGCATACCCTTCCGGGTAGACTTGCTGCCCTCTCGGCCACACCCTGGTCTTCGGAGATGGCCCCAACAAACCAGTTTGCAGATGACCTAGAATGACTCATAACTCTAAACTTCATTTTGGCCTTGCAAATCTGAGGCACTGAGGAGGCCTGGGGTCTTGGGTGAGTTAGAGATGGAAGTATATTTTGATCAGATGCTTCTTTTCTCTTCCCCAGTGCCTGCGTTGACTGAGCATTTGCAGAATGCTCTTACACGATCTTTCACAGATAGCTGCTCACTGCACATGACCCACACTGCTCCTTCTCGTGTGTGTCTGCTTTATGTACTTCAAACAAAGTGAAGCCAACTCTGTCATTTCGCAGTGCCTAACAACCTCTTGTAGAAATTTATATTCTGGCCTACACTGCAGTCTTTAGTGGCTGACAGCCATAGAATTCAAAACCAAGTAGTGTCTATCAGCCTTCTTAACTGTGTGCGCCCCCTATTTCGTCTCTTGCATTTGTTCTTCCAGGGATTGTATGCATCTCTGTATATATTTTTCCTCTCAGAACATCAACACTGCTGTTTCTGACACTTAGACATCCCACGCAAAGCCACTTTGAATTTTTGCCAAATGAAAAATGCATCCAACAATCAAGTTTCTAAGAAGGTGTCAAGTGGGGAATGATAATGTGTAATAATCGAGAAATGAATTTATTAAAAAGAAGCAGGCGCATTGACCATTTTTTCTCCAGGAAGGAGTAGAAATCTGTAGTGAGCATAAAGGCAGACTGTGAGTTCTCTTTAAAAAAGCAGTATTCTCATAAAGGAGAAGCACCACTTAAGTTTTTTTAAACTAAGACTTAAGAGAAATTAGGTAAGAGAGTTTATATATATATTTTTAATCTTTGTAGTTTTTTTTAAGGAGGGAGTGGTGAGGGAAAGGAAGTTAATACCTATGGAATGCATAGAAACTTCCAAAATAAAATGCCATTGATGGTTGAAATCACTGCTGTAGTCTGATCTTAAACATTGTACGAGGTTCTAACAGCCATTCGGACCTCTGAATCATCTCAAGTAGTATTTATTGTAGGACTGATCTTTAGGCTTTCATATCATTTTAGGTTTGGGGATCTCTAGTAGATTTCTGCCATCCAAGAGGAGGTTTGACTTTTAAATGGAGGTACCAGAGAAGGAAGTTAAGTGATGTCGACCAGCATTTCTGAGTGAGGGGGACGCCCCTGTGGATTAACCACGTGGATGTGCTGAGATACCTGAACCATTAGGTGAACTTGCAGGAGATACACCCACGTGTCATCATGAACTCAGGGGCAATGTGTGATGTGGTATTTGCTTTCTTAAATGGATAGCTCCTTGACTGAAAGAGGATTATAGCTTAAATGTTCCTCCTGATCCCTCTCTGATTTTGGAAATGGTGATTTACTTTATGGAATGGCCAAACAAGGTTCTGTTCCTCAGGCTTTCCCCATGCACATCTTTCTCTTTTCTCTCAATGACAAGAAAGCAAAACCCAATAACAAACTATGTAAATGACTCTGTAACCTCCCAGAGATGGTTTTAGGGTACAGAATTCTATTGTAGAAAAGTAGCAATACATTTCTTTCAGCTTGGACTGGGTGGACATAATTGGATCCTCCTCTGGGAGCAAGGAATAAGACACTCAACCACTCACCTTCCAGAATTATAATCCTGAAAATCCCTGTTTTCACCCAGGTCATGGGAGTGGTGGAAATGTGTTTTGGCTACTTTGAGAAGTAAACAAGGTTGTGATTACGTTGGGAAGAGAGCCACACAGGCACAGTTCCTTGTTTCTGGATGAGTATACCACACGTATGCCATGGTGATCATATATGCAAGCACATGCCAGTTTTCAGAAAGGATGTGACCTCAAAGAGTAAAACTTGAACTGAGTCACAGTTTCTAGTAATTCTGCCAAGTAGCCAGAGATGTAGAAATTCCTGATTCTATGTAAAGGGAGCTTGTGTAAAAGGAATCCTGGTTGACCCTTTTGTCATATGAATGTTCACATCCTCTCTGGAGAAGTACAGTTAGGACAAGTCTCATGGAAGTGGGATGTGCTGGGACACAGCTCATTTCAGTCACAGCTCAAATAGATCAAGATGAGGGTAGGTTATGTGGAGAACGCAGAATGAGTTTGTAACTTAGATGGAGATTAATGAAATAGGTCATGTACCCAGACTGAAAAGTGCATAGTCCCCACGGGGTCTAGCCCAAGCTTCTCACACTTTACCACACAGAAGAATCACTGGGGAGCCTGCCCTTAGAAAGCGGATCCAGATTCAGCATCTGGCCAGAGATTTCTGCGTCTCTGACCAGTTTCCAGGTGATGGTGATTGCTGGTCCAGAGACCACACTTTTGAGTAGTGAGAGGCTAACTCTCACGTTTGCCCATCATGATATTGGGGCAAGGGGGCGGTTCTTAAGGGCATGGGCAGTCAGGACGTTAACCTTTTCTTCTGCCTCCTAGACCAGTAGTGTTCTCAGAAGATTAAGAAGATTGAAGGGATTCAAAGCACAGGGTGAGCTTTACCGGCTCTTGGCTTTGGCAGCTAAGGTGCAGCTTTAAGAACCAGTGCCCTTCCACCTTCCATTCCCATTTAGTGTACCATGGACATCAGACCACGTGTGACCCTGAGATCCTGTGGGCACCAGAATGACTAAGATGGTATGATTTAGTAGACATCACAGAAAGGCAGGGATATGTCGTCATCGGTCATGACACTGAGGGTCAAGGGCTCTGAAACCAGACTGCCAGGCCTCAGAGCCCAGCGTCACCACTCAGCAGAAGTATGATGAACATGTTCCTTAATCTCTCTGTGCCTTGGTTTAGTGGTCCTTACCTCTTAAGGCTGTTGTGAAGATTAAATGAGCTGGAGCAAATACTCAGAACAGGGATGGGCCTTTGGGAAACAGCTATCCTTCACACCGGTGGTCCTCGAAGCCACCGCACACCTCTCCTGCCTCTTCACCCCAACATTTCAGCGGCCTGAGGTTGCACATCGCTCCCTCCCACCAGGCTAAACTCCAAGAGCAAAAACCCTTGTCTTATTCCTCTCTGGGAGCCCCCTCAGCACCTTATGCAATTCTTTGAGAGCTTATTACTGAATAAATCAAATTAAAAATTGTTCTCTGTCAGGAAAAGGTTGAGATCCATTTGCAGAAATAGCTTTACCAACCCAAGCTTTAGCGTGTACGGCAGCAAAGCCTTTCCACTAAGCCCTGTGGAAGTCCTCAGCTTGATTTATTTTTGGATTGCGTCTCCAGAATATGTCAAAATAGCTTTCCCTGCACACGGGAAACGATTCCTAC EMBV3_40865 TTCCACATCTGGGAAGCTCTCAGGAAATAGCCCCTCTGCACCAACTCCTTGGCCTTGAGG Gene BVV0102_138580 + 0 NULL GK000013.2:41980153-42217370 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40388 GTGTGTATGGGATTCTCAGGTGACTCAGTGGTAAAGAATCTGCTTGCCCATGCAGGAGTC Gene BVV0102_202393 + 0 NULL GK000020.2:28838258-29097860 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39178 ACACAGCTCCACCCATCAACAGAAAATTGGAGTCTAGATTTACTGAGCATGGCCCTGCCC Gene BVV0102_311685 + 0 NULL GK000030.2:57525443-57583768 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00030970 1 XLOC_017219 NonCoding TCONS_00030970 XLOC_017219 NonCoding NonCoding - 11:31794962-31796235 - TSS21969 1273 2 TCONS_00030970_5 127 0.534956794972506 1 0 1.06879069004672e-05 0 0 0 7.75676096626712e-05 3.37193041125162e-05 9.16214673455577e-06 9.80882069382214e-07 0.000297507499113695 1.93927622550079e-05 0 0 2.25395281766226e-06 2.84246421344864e-07 0 0 0 0 0.000125805713395153 3.67198019333627e-05 2.38470588824809e-06 0 0 0 0 0 5.11403232858836e-07 0 1.14405367960497e-05 0 XR_139113.2 LOC100849044 PREDICTED: Bos taurus uncharacterized LOC100849044 (LOC100849044), 1e-83 315 80.47 0.252945797329144 0 noncoding GATCAGACCTTACTTCCATCACCAGTCACATCCACAATTGGGTCTTGTTTTTGCTTTGACTCCGTCTCTTCATTGTTTCTGGTGTTATTGCTCCAGTGATCTCCAGTAGTATATTGGGCACCTACCAATCTGGAGAGTTCCATCTTTCAGTGTCCTATCTTTTTGCCTTTTCATACTCTTCTCAAGGCAAGAATATTGAAGCTGTTTGCCGTTCCCTTCTCTAGTGGACCATGTTTTGTCAGAACTCTCTACCATGATCCATCCATTTTGGGTGGCCCTATCCAGCATGGCTCATAGTTTCACTGAGTTAGACAAGGCTGTGGTCCATGTCATCAGATTGGTTAGTTTTCAGTGATTGTGGTTTTCAGTCTGTCTGCCCTCTGATGGAGAAGGATAAGAGGCTTATGGGAGAGACTGACTGATGGGGAAACTGGGTCTTGTTCTGATGGGCAGGGCCATGCTCAGTAAATCTTTAGTCCAATTTTCTGTTGATGGGTGGGGCTGTGTTCCCTCCCTGTTATTTACCTGGGGCCAAACTTCCCTGGTGGCTCAGATGGTAAAGCATCTGCCTATAATGTGGGAGACCCAGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGAAATGGCAATCCACTCCAGAAATCTTGCCTGGAAAATTCCCATGGATGGTGGATCCTGGTAAGCTACAGTCCATGAGGGTGCAAAGAGTTGGACATGACTAAACGACTTCACTTTTCACTTTCAAACTATGGTGGAGGTAATGGAGATAATGGCAACCTCCTTCAAAAGGTCGCATGCACACACTGCTACACTCAGTGCCTCCAACCCTGCAGCAGGCCACTGCCAACCCACGCCTCTGCCAGAGACTCCTGGACACTCATGGGCAAGTCTGGATCAGTCTCTTGTGGGGTCACTGCTCCTTTCTCCTTGGTTCTGGTGCACACAAGGTTCTGTTTATGTCATCCAAGAGTTTCACCAAGGTTCTCCCTATGACAGCCTAAACCATCACATTACTCAGAGAGCCCGATTATCAGCTCCTGTTGTACCTCCCCATCCAAGCAGTACTTACTTAATGGTCGTAATGGGTTTTCCCCATATAGGACTACTGCTTGCCATGAGGATTAATTCTTAGGCACTTTTATACGGTTATGGAATAACCTTATTCCATAAGGTTATGCCTGAGAAATATCTTGTGTCCAGAAGGAGCAAAATGTCCCTTTATTCTTTCAGTTCAGTTCAGTCGCTCAGTCAGGTCACTCTTTGCAAC TCONS_00027472 . 3' 308225 TCONS_00027472 . 3' 309497 EMBV3_17988 TGAGGTTGATATTATCGGTTTCAGTACAGTGTCGCAGTAGAGAGGGGAGCACCGATCGGA Gene GeneID:617631|LOC617631:XM_002698572:130_cdna UTR3_Alt 2 NULL GeneID:617631 26 GENE LOC617631 NULL similar to Uncharacterized protein C10orf88 EMBV3_37529 GCTAGCTGTGTCAGGAAGTGCTGCTGAGTTCATCCATTTATCCTGTAACTAACATTTAAG Gene GeneID:100141021|CYFIP1:XM_002685194:30_cdna Constitutive 1 NULL GeneID:100141021 2 GENE CYFIP1 NULL cytoplasmic FMR1 interacting protein 1 EMBV3_06012 GTCAGATCATGTTAAGTGTTACGGACAAATTTAAAGGAGGGGAGACGTGGAGTACCAATG Gene BVT0102_258793 + 1 EMBV3_41870 GK000011.2:43527754-43540755 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37386 AGGAAGACCCAAAGACTCCTCAAAGGCCAAGTGCCCAGACACAGACTTCAGTTTCCCCAA Gene BVV0102_086797 + 1 EMBV3_07372 GK000025.2:33729635-33749962 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22351 GGTGTTGGGCACATACTGTGGGGGCTGTGTCAACTCCATTCTTCAGACCAGCTTCACATT Gene GeneID:618660|LOC618660:XM_002686606:103_cdna Constitutive 0 NULL GeneID:618660 3 GENE LOC618660 NULL similar to olfactory receptor Olr1353 EMBV3_20103 TTCAGAATCCGAAGGAAGGCGTTTATCCCGAGTGAGTTTTCACCATCTCTCAGAGCCCAC Gene GeneID:530000|OSBP:XM_002693838:134_cdna Constitutive 0 NULL GeneID:530000 15 GENE OSBP NULL oxysterol binding protein EMBV3_35812 GAGCAGCCTGACAGTCTCCGGGCTCAGTATGGCACAGAAATGCCCTTTAATGCAGTCCAT Gene GeneID:513348|TXNDC6:NM_001075615:27_cdna Constitutive 0 NULL GeneID:513348 1 GENE TXNDC6 NULL thioredoxin domain containing 6 EMBV3_15741 TCCCACCTTCACTATATGCATCCTCAAAACCTAGCAGGACTACGTGGTGGAAATGCGCTG Gene GeneID:613968|CLNS1A:NM_001076300:43_cdna Constitutive 0 NULL GeneID:613968 29 GENE CLNS1A MGC139417 chloride channel, nucleotide-sensitive, 1A EMBV3_12889 CTTCAAGTGCTCGGCCTGCGAGAAGACCTACAAAGACGCGGCCACGCTGCGGCAGCACGA Gene GeneID:539541|HIC2:XM_002694679:247_cdna Constitutive 0 NULL GeneID:539541 17 GENE HIC2 NULL hypermethylated in cancer 2 EMBV3_35560 AGACACTGGCCTGCTGACATGTCTCGATGGGTGATTTCCTCAAACTTGTCTGTTGCGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33214 AGGGCCATCAGCAGAGTTCAGCTTCTTAGTCATCAAGTCGCCCCTTCTGGATCTGTCAGT Gene BVT0102_064834 + 0 NULL GK000006.2:14565921-15271535 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202530 TCONS_00202520 TCONS_00202519 TCONS_00202522 TCONS_00202528 TCONS_00202524 TCONS_00202526 1 XLOC_123997 Coding TCONS_00202528 XLOC_123997 NonCoding Coding - 6:14596433-14687248 - TSS151966 1187 1 TCONS_00202528_2 70 0.333614153327717 3 0.986962362631312 0.000245575771736549 0.000664576808878877 0.000243651614664657 3.51697471690465e-08 0.000171547966832528 0.000163308360100361 0.000259627860376169 0.000122049731825496 6.79060632616606e-05 0.000183685411837393 1.56854931669836e-05 0 9.50764706275994e-05 1.4920813758838e-05 0.000161063691981234 0 0 0 0.000272411053884364 0.000584463689119735 0.00150895724123275 0 0 0 9.44814285613584e-06 0.00103916300904483 0.000205870748656296 4.73444135489899e-14 4.67500686836423e-09 0 XM_005213572.1 ALG5 PREDICTED: Bos taurus asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae) (ALG5), transcript variant X1, mRNA. 1e-26 125 78.26 0.130581297388374 0 noncoding CTTTACCTCTCTTCAAAAGAGTTCTTTCTTTGTTGTGGTGGCTCACCATGGTTACAGACCCCAAATTTCAAATCCTTGTTGATTCCAATTAAGCCCATTTTTGCTGGAGAAATAACTGGTAATCTGTGTTAGTTAAACATTTTGGCGGTCCACATGGGGATCCAGAGAAGGCTCCTGTTGACTTCCAGGCTGGTAAGCAAACAGAGAATTCCTGAGTAACAACTTTCAGAGATAAATCAACTCACTGCAGTGGCATCCTATCCATGGACTAGTGACCCAGGGCCATCAGCAGAGTTCAGCTTCTTAGTCATCAAGTTGCCCCTTCTGGATCTGTCAGTACCCTGAAGAGAACGTGCCTGTGCCCAGTTGCATCTGACTCTGTGCAACCTCATGGACTATAGCCCACCAGGCTCCTCTGGCTATGGGATTCTCCAGGCAAGAATGCTGGAGTGGGATCTTCCTGACCCAGGGGCTGAACCCACATCTCCTTCGTCTCCTGCACTGCAGGCAGTCTTGACTCACTGAATGACTCAGAAACCTGGCCCCAAAGAGTAAGTAGTTTCAAATGTCAGGCTCATCTCCTTGGTTCTCAGTCTCCCCAGATCTCGTCCTGTTTACTCTTCACTCTTTTTTGGATTTCCAGTGCCTTGGAGAATATGCTTTTTATATTTTGTTCAGTTTTTCTAGTTATTTGTCCAAATTATCTACTTTGTCATTATTGACTTTCCGCAATCATTTTTTTAAAGCCTATAAAGAATGTACATACTTTAGTCGATAGAAACTGAGTATCAAAGAAGAAATTATATAAAATTTAAATTGTTTTCAGAATTTCAATAATAATAATAAATTGTAACCTTTTTTGTCATGATCCTTTTGCAATCTTAGTGCTATAGTAGCCCTACTCAAAGATGTGTGATAGTCTAAACCAGGTCAGCAATACATTTTAAGGTTGCAATATGATGACAGATACAGAAATCAATGGCATAATATAATCTCAGCAGCCTAGGGGAAATCCGCAGCACATTGTCTTTTTTCTTAGTAACTTAGTAACTTTCTTAACTTAGTAACCAGTTAATCTCTTATAAATAAAATGTACACCATGATGTCATATGTTTCACTTAGCGAATTATCACAAATGGCTCTTTTTAAAGAAGTAGTTCTTTGAACTGAAGTCCCATCTGCCTTTC TCONS_00204492 TCONS_00204493 r 5' 30514 TCONS_00204492 TCONS_00204493 r 5' 30514 EMBV3_21150 CAGAGGTCTGTGAGAGATTGAGAAGGAGCAGAAAGTACAGCCTTGGAGCCTTAGGACTAG Gene GeneID:538143|RHOV:NM_001076099:181_cdna Constitutive 1 NULL GeneID:538143 10 GENE RHOV NULL ras homolog gene family, member V EMBV3_15297 CAGCTTATAGACCGCAACTTGCAGGTATCCCTGCTCTCCGTGGATGACATGTACCAGAAC Gene GeneID:510542|BEST4:XM_002686433:416_cdna Constitutive 0 NULL GeneID:510542 3 GENE BEST4 NULL bestrophin 4 EMBV3_01502 GCGTGTTACAGCAACCGTAGACAACTAACACTCAGGCTCACTAACTTCTGGTCGTCTCTA Gene GeneID:534389|MGC143209:NM_001102171:26_cdna UTR3_Alt 2 NULL GeneID:534389 20 GENE MGC143209 NULL hypothetical LOC534389 EMBV3_42844 ATCCTCAGCCTGTTCTACACGGTCATCACACCCATGCTGAACCCCATCATCTACACCCTT Gene GeneID:520305|LOC520305:XM_002687587:662_cdna Constitutive 0 NULL GeneID:520305 5 GENE LOC520305 NULL similar to Olfactory receptor 10P1 (Olfactory receptor OR12-7) EMBV3_29840 AATTAAGTAAACAGAATCCTTCAACGCTATCCTCCCCCCTAGCCCCAACCACGATAGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11667 AGCCCGTCCTCTGACTGGAATCACCCTGAAGATGGAGACGCTCGTTCGATTTACGTCATA Gene GeneID:505993|DLL3:XM_002695055:400_cdna Constitutive 0 NULL GeneID:505993 18 GENE DLL3 NULL delta-like 3 (Drosophila) EMBV3_42286 GCTCAATTTGGTGGTAAAATCTTGAAGAAGATTCCAGTAGAGAGTGCCCACCTTGGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40071 CCGGGGTCTGGTTTTCCATCGGTATATCGTTTCCATAGATACTGGGCATATAGCTCAAAG Gene BVV0102_127211 - 1 EMBV3_28934 GK000005.2:100642187-100653956 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40477 TTCCAGAGCAAGACATACCACACAAATTCTCCAGCAACACAGGAACACAGCCCTGAGCTC Gene BVV0102_342040 - 1 EMBV3_25088 GK000023.2:27604059-27613928 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00222010 TCONS_00156845 TCONS_00036105 TCONS_00177050 TCONS_00218903 TCONS_00207277 TCONS_00011813 TCONS_00116428 TCONS_00238305 TCONS_00142231 TCONS_00251705 TCONS_00064414 TCONS_00115687 TCONS_00152743 TCONS_00218448 TCONS_00230670 TCONS_00030297 TCONS_00223441 TCONS_00177841 TCONS_00098386 TCONS_00186108 TCONS_00110373 TCONS_00156835 TCONS_00252934 TCONS_00124583 TCONS_00251760 TCONS_00175194 TCONS_00153777 TCONS_00148196 TCONS_00009883 TCONS_00148453 TCONS_00199628 TCONS_00252489 TCONS_00252675 TCONS_00135547 TCONS_00252954 TCONS_00009945 TCONS_00175255 TCONS_00251930 TCONS_00251662 TCONS_00117502 TCONS_00011804 TCONS_00208127 TCONS_00161191 TCONS_00199603 TCONS_00251524 TCONS_00021596 TCONS_00123618 TCONS_00019980 TCONS_00039853 TCONS_00107584 TCONS_00011198 TCONS_00066192 TCONS_00030295 TCONS_00251846 TCONS_00063903 TCONS_00089951 TCONS_00089138 TCONS_00199596 TCONS_00199595 TCONS_00040147 TCONS_00115736 TCONS_00175572 TCONS_00036106 TCONS_00130259 TCONS_00110387 TCONS_00007555 TCONS_00231613 TCONS_00250654 TCONS_00239592 TCONS_00251673 TCONS_00238304 TCONS_00078479 TCONS_00039908 TCONS_00229751 TCONS_00125001 TCONS_00122013 TCONS_00218881 TCONS_00030202 TCONS_00080733 TCONS_00070957 TCONS_00229410 TCONS_00007501 TCONS_00088868 TCONS_00056728 TCONS_00199062 TCONS_00110644 TCONS_00178022 TCONS_00209870 TCONS_00047865 TCONS_00160965 TCONS_00249137 TCONS_00251627 TCONS_00218865 TCONS_00179810 TCONS_00066279 TCONS_00117681 TCONS_00219970 TCONS_00197184 TCONS_00116955 TCONS_00056819 TCONS_00123643 TCONS_00238326 TCONS_00007719 TCONS_00019198 TCONS_00071185 TCONS_00124043 TCONS_00119942 TCONS_00031911 TCONS_00142493 TCONS_00185942 TCONS_00040860 TCONS_00188225 TCONS_00056147 TCONS_00190322 TCONS_00239418 TCONS_00071079 TCONS_00070840 TCONS_00037791 TCONS_00063487 TCONS_00030941 TCONS_00010780 TCONS_00223365 TCONS_00210172 TCONS_00156829 TCONS_00209529 126 XLOC_131641 XLOC_135319 XLOC_095305 XLOC_021081 XLOC_106824 XLOC_132222 XLOC_125795 XLOC_007363 XLOC_070595 XLOC_144972 XLOC_086656 XLOC_154646 XLOC_039138 XLOC_069856 XLOC_092508 XLOC_131768 XLOC_140160 XLOC_016551 XLOC_136741 XLOC_107614 XLOC_058632 XLOC_112161 XLOC_066277 XLOC_095295 XLOC_155875 XLOC_076127 XLOC_154701 XLOC_104977 XLOC_093539 XLOC_090079 XLOC_005436 XLOC_090333 XLOC_121281 XLOC_155430 XLOC_155616 XLOC_081770 XLOC_155895 XLOC_005497 XLOC_105038 XLOC_154871 XLOC_154603 XLOC_071668 XLOC_007354 XLOC_126640 XLOC_098083 XLOC_121256 XLOC_154465 XLOC_012269 XLOC_075170 XLOC_010658 XLOC_023670 XLOC_063494 XLOC_006749 XLOC_040909 XLOC_016549 XLOC_154787 XLOC_038629 XLOC_054732 XLOC_053924 XLOC_121249 XLOC_121248 XLOC_023964 XLOC_069905 XLOC_105353 XLOC_078970 XLOC_066291 XLOC_003116 XLOC_141101 XLOC_153597 XLOC_146258 XLOC_154614 XLOC_144971 XLOC_047367 XLOC_023725 XLOC_139245 XLOC_076544 XLOC_073569 XLOC_132200 XLOC_016457 XLOC_049617 XLOC_042734 XLOC_138905 XLOC_003062 XLOC_053654 XLOC_034531 XLOC_120715 XLOC_066546 XLOC_107795 XLOC_128381 XLOC_027997 XLOC_097858 XLOC_152080 XLOC_154568 XLOC_132184 XLOC_109580 XLOC_040993 XLOC_071847 XLOC_133287 XLOC_118846 XLOC_071121 XLOC_034622 XLOC_075195 XLOC_144993 XLOC_003279 XLOC_009878 XLOC_042957 XLOC_075595 XLOC_073015 XLOC_018156 XLOC_086918 XLOC_111995 XLOC_024674 XLOC_114268 XLOC_033950 XLOC_116357 XLOC_146084 XLOC_042852 XLOC_042617 XLOC_021620 XLOC_038214 XLOC_017192 XLOC_006331 XLOC_136665 XLOC_128682 XLOC_095289 XLOC_128040 Coding TCONS_00223365 XLOC_136665 NonCoding NonCoding - 7:99197616-99198194 - TSS167363 578 1 TCONS_00223365_1 46 0.998269896193772 1 0 0.000120648814424882 6.20409940898881e-05 5.51405551987913e-05 7.67844353482926e-05 2.53681650352793e-05 0.000349004910194905 6.67386467464298e-05 9.48956839952509e-05 0.000136259884344415 0.000309839721293351 0.000106745086248943 9.34329214631254e-05 5.07325207223975e-05 7.83485220371222e-05 0.000264162962598948 0.00439530801700214 0.00120968757694069 0.0042704637380745 3.04795312933588e-05 4.11579086485804e-05 7.71600047162288e-06 0.00131452670583257 0.00344702967144713 0.00588780578812554 6.32849547407575e-05 8.55096297502652e-05 7.47435494178299e-05 0.000452121394965465 0.000429115516678603 0.00059472107130323 XM_001250798.4 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant 2, mRNA. 2e-13 80.6 94.23 0.0882352941176471 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 ACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATGGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATTGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATGGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAG TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 EMBV3_42235 AGCGTCGGATGAAGAGGGCGACAGCAGCTTTGGCAAGTACGGGAAGAACGCTTACGTGTA Gene GeneID:514998|CLDN15:NM_001046186:182_cdna Constitutive 1 NULL GeneID:514998 25 GENE CLDN15 MGC137177 claudin 15 EMBV3_21577 ACTATGACTCCTTAATGTTGCCAAAGTACTTTTTCCTTAAAAGGCTCAGTTTTCATTAAA Gene GeneID:404152|ATP6V1D:NM_001075141:47_cdna Constitutive 3 NULL GeneID:404152 10 GENE ATP6V1D VATD ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D EMBV3_20920 GGATCTCATGGATACCTTCAGGACATTCCATCCAAAGGCAGAAGAATACACCTTCTTCTC Gene BVT0101_003797 + 0 NULL GK000003.2:1415266-1538654 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00039848 TCONS_00089336 TCONS_00210775 TCONS_00089664 TCONS_00098305 TCONS_00200344 TCONS_00176761 TCONS_00198315 TCONS_00091705 TCONS_00175170 10 XLOC_023665 XLOC_054121 XLOC_129285 XLOC_054447 XLOC_058551 XLOC_121996 XLOC_106535 XLOC_119970 XLOC_056478 XLOC_104953 Coding TCONS_00210775 XLOC_129285 NonCoding NonCoding - 6:108528060-108528393 - TSS158282 333 1 TCONS_00210775_1 44 0.996996996996997 1 0 0 0 0 0 0 0 0 0 0 0 0 0 8.61646056121868e-06 0 0.00411796814454779 0 0 0 0 0 0 6.68528815363269e-05 0 0.000100688460707452 0 0 0 0 0 1.50456497701853e-06 XM_005216780.1 KCTD3 PREDICTED: Bos taurus potassium channel tetramerization domain containing 3 (KCTD3), transcript variant X1, mRNA. 3e-52 208 83.17 0.600600600600601 XR_247634.1 LOC101928510 PREDICTED: Homo sapiens uncharacterized LOC101928510 (LOC101928510), misc_RNA. 4e-19 98.7 68.03 0.87987987987988 0 noncoding AGAAATTTTTTGATTTCCCTTTTGATTCCTTCAGTAACCTCTTGGTTACTTGGAAATCTGTTGTTTCATCTGCATGTGTTTGTGTTTTTTACAGTTTTTTTCTTGTAATTGATACCTAGTCTCATAGCGTTGTGGCTGGAAAAGATGCCTGATACGATTTCAGTTTTCTTAAATTTACTGAGGTTTGATTTGTGACTCCAGATGTGGTCTGTCTTGGAGAATGTTCCATGTGCACTTGAGAAGAAGGTGTATTCTTCTGCATTTGGATGGAATGTCCTGAAGATTTCAGTGAGATCCATCTCATCTAATATATATCATTTAGGACTTGTGTTT TCONS_00204119 TCONS_00204120 TCONS_00204121 TCONS_00204124 . 3' 3756 TCONS_00204119 TCONS_00204120 TCONS_00204121 TCONS_00204124 . 3' 4088 EMBV3_16303 CAAATTGATCCTGCCCCCCAACCCAGCCTTTGGCTTTGTAACTTGTCCCACCTGCCAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43409 GGCTGCGAACCTGACCAGCACCAACGGCAGCAACAGTATTAGCATGTCAGTAGAGATTAA Gene GeneID:511283|ARID3A:XM_002689144:134_cdna UTR3_Alt 2 NULL GeneID:511283 7 GENE ARID3A NULL AT rich interactive domain 3A (BRIGHT-like) EMBV3_30797 CAAGACTCAGCCCTGTGAAACTGGTAATCTTGGTGCCTAAGCTGGATACCTGCGTATAGC Gene GeneID:504334|RGL2:NM_001075154:71_cdna Constitutive 0 NULL GeneID:504334 23 GENE RGL2 MGC139909 ral guanine nucleotide dissociation stimulator-like 2 EMBV3_05273 CAGCTACTAACACTCCTTTAAAGATCTTCTTTGCCAGTGGATCCATAGAACGGGACATCC Gene BVV0101_072501 - 1 EMBV3_19692 GK000011.2:19645260-19659021 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024292 TCONS_00024294 TCONS_00024293 1 XLOC_014472 NonCoding TCONS_00024294 XLOC_014472 NonCoding NonCoding LOC100847505 11:19653940-19660721 = TSS17861 758 1 TCONS_00024294_1 90 5 0.888938053097345 0.000697508194765446 0.000687136326765983 0.000442489392940948 0.000616325441999809 0.000450660422735463 0.000393753209543605 8.6855821053633e-05 0.000508666771008334 0.00125727170641953 0.000616832495402111 0.000685966207917084 0.00126844634372103 0.000116804497290778 0.000317682197250355 0.00056720947352 0.0107116523786615 0.00306572275200757 0.00213625756959904 0.00157501938132565 0.00145205438166272 0.000956769201565251 0.00284356520975162 0.0160468539764875 0.00707223441882263 0.00193923760779165 0.00147614427571623 0.00184998052247248 0.00373534635356896 0.00129398504144008 0.00157784362657033 XR_227024.1 LOC100847505 PREDICTED: Bos taurus uncharacterized LOC100847505 (LOC100847505), 0.0 1359 100.00 0.992084432717678 NR_037880.1 CEBPZ-AS1 Homo sapiens CEBPZ antisense RNA 1 (CEBPZ-AS1), transcript variant 7e-84 315 85.82 0.358839050131926 0 noncoding 0 0 1 1 -0.0105597088983445 0.947874724845761 -0.0198084540355357 0.773835581902461 GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAAGCCGTTTCAGTCGTGCACAGTAAGCGGTAATTACGGTCTGGGGGCGGGGCCAACGCCCGGGAGGGGAGGGCTCTGCCACACTTTGCGCATGCGCAACCCCTGGAGTCCGCGCCTCAGGATGTCCCGTTCTATGGATCCACTGGCAAAGAAGATCTTTAAAGGAGTGTTAGTAGCTGAACTTATGGGCATTTTTGGAGCGTATTTTTTGTTTAATAAGATGAACACAAGCCAAGATTTCAGGCATACAATGAGCAAAAAATTCCCCTTCATCTTAGAAGTGTATTACAAATCCATTGAACAGTCTGGAATGTATGGAATCAGAGAGCAAGATCAAGAAAAATGGCTGAGCAATAAAAATTAGGAATCTGACCATCAATCAAAGTTTGATTTCAAAGTATTTCAAAGTATCAGGCAAGATTAAAATTCTGAAATTGACGAGGGTGTATTTTAAATATTTAAGGTTAACTGTAAATTTTAACTAAGTAAGAGGTTTTGTTCCTTGGAGTAACTGTGAAGAAGTGATGGAGGGTTTCTTTATTGTGTTATAACTAGAGTTTTGTTTACTACTTGAAATAAAGTGGTTCTTTAAAAAAACCTCCCCTGTAATTCTAAATATGTAAACCTTTCAAAACAGAAGAAATAATAAAACATTTTTAATATATGTTA EMBV3_15792 AGGTGACATGGTTGTATCAAGAGTGAAAGGACACAAAGGAGAAAGAGGGCCTGATGGGCC Gene GeneID:100335993|LOC100335993:XM_002685649:378_cdna Constitutive 0 NULL GeneID:100335993 2 GENE LOC100335993 NULL hypothetical protein LOC100335993 EMBV3_04230 AGAGCAAGACACTATGACGTTTTCGGACGGCCTGACCCTGAATCGAACCCAGATGCACAA Gene GeneID:616895|LOC616895:XM_002698748:6_cdna Constitutive 0 NULL GeneID:616895 27 GENE LOC616895 NULL retinoic acid receptor beta EMBV3_33199 CTGAAAAAAGCTGACTGCTCCTTCTGGTCCAAGTACATCCAGTCTCTGAAGGCCTCGGCA Gene GeneID:100336590|LOC100336590:XM_002683744:1_cdna Constitutive 0 NULL GeneID:100336590 14 GENE LOC100336590 NULL thyroglobulin-like EMBV3_07869 AAATTCTGGATATCATCTTCCGGGACTTCTGCGTGGGCAAGTGAGGGGACAGTGGAAGCT Gene GeneID:539656|GTPBP3:XM_002688542:154_cdna Constitutive 0 NULL GeneID:539656 7 GENE GTPBP3 NULL GTP binding protein 3 (mitochondrial) EMBV3_38585 GCATTAGACAAGGCCTCTAACCACTTTCGGATCCTTTCTGTTTTGCTGCAACCATATTCC Gene GeneID:533634|OSBPL6:XM_002685263:70_cdna Constitutive 2 NULL GeneID:533634 2 GENE OSBPL6 NULL oxysterol binding protein-like 6 EMBV3_02180 TGGTGATGAGCACAGTCCTTTCATCAGGGCAGCTCATGCTGTGCAGGATTCACGGTGCCA Gene BVV0102_029404 + 0 NULL GK000020.2:138258-153401 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122194 TCONS_00054178 2 XLOC_073749 XLOC_031987 NonCoding TCONS_00054178 XLOC_031987 NonCoding NonCoding - 14:1085519-1085805 - TSS39855 286 2 TCONS_00054178_2 43 1 0 0 0 0 0 0 0 0 0 1.37939409711297e-05 0 0 0 1.76404124777952e-05 2.2843798408886e-05 0.000449898101888509 0.000415566786836921 0 0 0 0 0 0 6.41542330185153e-06 0 0 0 0 0 0 0 0 noncoding TGTTGTCATGGGTTCCAGTAACCTGCATCATCACTACAAATGATCTTGGATGGTGGCACAAGCTGTGTCTTTTTCTCCTTCAAACAGAAAGGTCTGGACGGCTTTGCTGAGAGGTTTTGTACTCTAGCTGTGGTGCTTCTGAGCAGCATCTGGTGATGAGCACAGTCCTTTCATCAGGGCAGTTCATGCCGTGCAGGATTCATGGTGCCAGCATCGCTCTGCTGTCCTGCCCCGCAGGGCCATCTGGTCGCTGGATTCCAGGGAGGGCCGAGGCAGGCTGCAGGGA TCONS_00050941 . 5' 83250 TCONS_00050941 . 5' 83250 EMBV3_14454 CCTGTCATAGGTGTTACCACACAGTTTCATGCATGGTGGCATATTTTAACTGGCCTTGGT Gene GeneID:615110|ACER3:NM_001102285:59_cdna UTR3_Alt 2 NULL GeneID:615110 15 GENE ACER3 MGC179542 PHCA alkaline ceramidase 3 EMBV3_06377 TGCTCCGTGCTGCTCTCTCCTCCACCACCAGGATCCACCCTGCCTAAAGTTTTAGTTAAA Gene BVV0102_146289 + 0 NULL GK000003.2:57040785-57100333 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170031 TCONS_00170032 1 XLOC_103494 Coding TCONS_00170031 XLOC_103494 Coding Coding LOC786977 3:57096237-57104655 = TSS127159 8133 5 TCONS_00170031_23 138 0.126521578753228 3 0.0340976594986337 2.17477003759314e-05 2.61224813577497e-05 4.01086935111261e-05 2.85891745029551e-05 2.00328407854863e-05 4.31463348565774e-05 1.29964035528061e-05 9.45423995919619e-06 5.33575757934899e-05 0.000146458474297581 2.08568356272096e-05 6.33099346716651e-05 1.05830309803778e-05 4.17959426372563e-05 2.49743574788252e-05 0.00124418499852755 0.00045398048519782 0.00178008662754149 3.39457470890849e-05 5.48221052447906e-05 6.48975631206745e-05 0.000803078143587362 0.000323838955568153 0.000737173923173829 6.9125292357224e-05 3.88383485577639e-05 1.0175940254526e-05 8.47188991980899e-05 3.34265122787989e-05 0.000132191398279542 XR_234021.1 LOC101904240 PREDICTED: Bos taurus coiled-coil domain containing 3 pseudogene (LOC101904240), misc_RNA. 0.0 8493 100.00 0.578876183450141 NM_012262.3 HS2ST1 Homo sapiens heparan sulfate 2-O-sulfotransferase 1 (HS2ST1), 0.0 2102 77.22 0.33972703799336 TCONS_00170031_23 sp|Q9UPS8|ANR26_HUMAN ANR26_HUMAN Ankyrin repeat domain-containing protein 26; 4e-27 108 73.97 0.521739130434783 0 coding 0 0 0 0 0.141391070449042 0.374750227581739 0.0416065304931411 0.393929945859423 ATAGCTTTTTCATCAGGTAATCAACTGAAACACTTGAACAACAGAGAGCTGGCAGAATGTTAAGGAGAAGGAGTGATTCTCTCTCCAACAGATGTGACAAAATGGTCTCAACTTGGAAACAGTACTGTGTAAATGAATCAAGAGAACAGCAGAGGGGGAGAAAAAGAGAAAGCAGAGACAGAGGAAGCAGCAAGCATCTTCCAACGTGGACTGTGAGGGGGAAAAGGCACTCTTCTTCAGCTGTCTTGTGTATTTATAAAGTGAAAGTCAAAATATACAATCCGTTTGCCAAAATTACATTCAACACTGCTTTAGAGATGCTCACACACCTGAGTCTCAGTAGAAAGCTTTAGAAGCTGTCTGAAAAATCAGATAGACAGCACCAGTGTGTCTAAACCATAGGCTTACCAGTAATGGGTTTTAAAAGAGATCATCACCATCAGGGTCCTTTTTATAAACAGGACTGCAAAGGTCACAAAGCTGCATGAACTTAAATTACAGGATAAATCTGATGAACTGATTGCCCATTTCTATCTTTACAATTCCCTCTCCAGTAAATCAGAAAGCAAGCTCCACTCGAGAGGAGTTGAATTGGCAGTGCTCATCTCAAACAGGGTGCTTTTCCCCTCCAAAGGCTGCCTGAGCAGCAGTTTAGTTGGCATCATCCAGCAGCTTTGCATAGGGTAAATGGATGCAAAAATTTAACAGCAATTGCCTTACTTCCTCTCAAAGCAAACAGCACTAACTTATGAAGAGGCACATTTTCAACTTATGAAGTAGAAGCACCTGGACCTCTTAAAAGACAAACTTCATAAAAGGTTACAATACTGGGTGCCTCTCATAATAAAGGATTTTAGGGCCATAGGTGTGTTTGAGAATGATCAATGGGAAAAACCAGAGAGATGGTTTACACAGATGTTCTCTATGTAGAATTTGAATAGAAATTAAAATACCAGCTATGCATTGGGGAGCCAGCCTTTAGTTCAATTCTCTAGCGCTTTTAGAATTTTTATTTCATTTTATTAGAAAAAGAGAATCATTGTCTACAAACTATTTTCTTTCTAACTATTCAAATACAATGAGCAAATCACCTGCAATATCAAAATACTGTTTGTAAATCACAGATGGGACTCACAATTTTAGGAATCTCTGATAGGACATATATTGAGAAATAACAGTGGACTTCAAATTATAGGCATTAACTGAATTTTAAAAATAGAAAATAAAATGCAAAGTTTAAAAGTCAGTAAGTTTTTCTCTGATTTTCAGTCATTTAAATCCAATCATCAGGAATTCAGAAGCACCCAGTATGTTCAAAGTTGCACAAATGCATATGGATGATAGAAAAGTAACCCCCATGCAATACTTTATGTGTTGTTGTCAGATATATTTAGGTGATACTTTACAGATTAAAGCTGGGTAAAACCAAAATACATCCTTTCCATTAAATTTTAAAAGTCACAACAATTTATCAATAGTTGCCATTTCACAGCAATTAGAAAACAAGAGTTGATACAAGATGAACAAAAAGGTACTTTTCCCTCTTTTAGGAAATAAACATATATAGATATATATATACACACATACACACATAACATTATCTTTTAAAATTCAAAGTGGTTAATTTGCTATTGTATTGTATAAAAAAAAATTTTCCCCTATTTTCAAAGTACTGAAAAAAGCGCAGAGGCTGAAAAAGAAAAATCACACTTGCCACTTTAAAAAAATACATTACCATCTCAGTGGTTCTGTTTATTTGATTATAAAGTTAGGTATTATAAGGACTCTGCACTTGTCAGGCTCCTAGGACTATATTAGACCACATGGGATTAAATCTAACCCTTTCTCAGTCTCCAGGAAGGATACTTCTCACCCACCCTGAAAGCTGATAGCATAAACGCCCCTATTCTGAACAGCTAAACTGGGAAAGAAAACCTGCCCACCTGGAAGCAATCCAAGTTATAAAAGTTTATGAATCTGTGGGAGAGACCGCCTGGATCAGAAAGCTATTCTTTGGATATAAGTTAGGAGCTGTTTTGGAAGTATATAAACTCTTTTAGGCCAGTAGGGTACAGATTCAAAAGTGATTTCTCCATAAATAACAACCTGCTACAGGGATTGGCAAAGTGCAACCCATGGTCCATATTTGGCCTGTCACCTGTTTCAGCAATAAAGTTTTATTGGGACACAGCCATACTCATCACTATGTGTTGTCTGCTTTTATACTAAAATGGCAGAGTTGGGTAGCTGTGGTGGAGACCGATGGCTTGCAAAGTCTGAAACTGTATGTTCTCTGAATCTTCTGACCCTAGATCTATGTGCCACTGTAGTTACCTAAAAGAGCTGATGCACCGTAAGATTTAGCTGGACTCAGAGAATAACCCACATCCTAGGCTTCCCTAGCAGATAAATGCCAGATGTCCCATCCCAAGGCGGTGTTTTACTTTTGGGCAAGGAAATCATTTGTATATATTTTCAACAAATGCCTGCAAAAGGTATTAAATTCACAAAAAAGAAAGTCAAGTAAGAAAAGTATGCCTGTTGATATACTCTTTAATATTGTCCTATTATTGAGGGGGTGGGGAAGGGTGTTATAATGACTTTTCCTGCCAACTTCTTTTAGCTTTTCTTTAAATTTGTCCAAAATGTCTTTTGATAAGTTGCACTCTCTCCTCCTCCCATACAATCAACAACCATTAAAGCAAGCTGCCTGAAATGCTTAACATAGTCTGGTGAGGCCCTGTTACGGGATATTTATTTAAACTAAACATATTAAAGATTACTCTTTTAGAAAATGTTTCCAAAATTCTTTATCTTTGCTACTCCAAGAAGTGGAAGAAAGTAAAGAATGCACAGGGAAATAAAATTCTGCAAAATATACCTTAAAAAACCAGAGGTATAAAATAGCTACCATTTCTGAATGGTAATGTAAAATAAAAACAGAAAAGTCTTCCACATTTGAAGAGCAAATTTTCCTCTGCCCTGAGTCAGCTAATGAAATCTTTTTGCAAACAGGGAACAAACTCCTGAACTCAAGCAGCTGCTCATGAATCTCTAAGAGTTCACAGGTGTTTCAATTTTCAATAGTTGTTGAAACAGGGAAGATAAAACACTGATAAGATATTTATTAAACACAAATTCATATCAAGATGAACTTTTTTCAACCAGCTTATAAGTGAACTTTTCTCTTTTCTTTGTTAAAAAACCAATGATATGAAACTATATGTTAAAGATGTTTCCATAATACCTTACATTTATATCGCGCATAACAATTTTCAAAGTGCTTTCACATGCCATCTCATTTAATCCTCACAACACCCCTGTGAGGTAGGTACAGCAGGTATTATATCCTCATTTCAAGATGAGGAAACTGAGGCAGAGAGAGGTTAAGTGACTTGCCCAAGGTCACACAGCTGATAAGTGGCAGAGCCAAGTCAAGAAATCAAGATTTCCGACTCCTCGTCCAGTACTCTTTCCACTATAACTACTGCCCCCAAATATGAATAATGTACTTCGTATCAAAATTGAAAGGTTACTGAAGTTCATTTCAGTGATGTCTTAACAGTAAAGTTAAATGAGAAATACAAGAACAGTAGATCTGATGGTTTTACTTGACGTAATAAAATTGGTGCAAAATCACTTGTCTAATTACTTATAACCTTTTGGTCCAAATACATAAAATATGCAATATTTACAGCATTTTCCTTTTTTTTTATTTTTGTAAATGCAATGCTTTAAAACACATTATAAAGCACCTTAGTAAAAATAGTCTACAAGGAAAAGTACAGAAGTAGGAAAATCCTACCCATACCACAGCTCACTAATGGAGATATAATGTGGAGTCACCGATACCTCAGTTTTACAGCTTTACAAATAACCCATGGAGAAACAAACACTAAATTTACTTTTTTGATATTAATATGTGGAAGCCTTAACTAAAACTTTAGGCAGGGTGGATCCTGGTGGTGGAGGAGAGAGCAACACGGAGCAGAGTGCCCAGGGCTGTGCTCCTGGGGCCCCGGGCAGCTGCCCCGGGTGCAGCCAGCGCTCACCTTGCCAGTCCCAGCACTTGCCCCCCACCGCTGCAGCAGCCAGCATGCTGCACCCGCTGCTGCTTGCCTGGCTCTGCCTAGCTGGCTGGCCTGGGGCCTCCCGCAGCTGCCAGCTGCCCTCTGAGGGGAGACCCCTGAGCGAGGGCTGCCACACCAAGCTGGCCGCGATCATTGTGTACGCCAAGGTGCTAGCGCTGTACCAGGAGTGGAATGGCCTCTACAGCTACCTACCTGCCCTGGCAGTATGCTGGGCTCTTCTACTGGGCCCAGATCAAGATGCTGTGCAACCAAGCGTGGGGCAGCACGCTCCAGGTGCCCGCAGGCTCCAGGCTCAACCTCACTGGCCAGGGCTACTTCTCCTGTCACTCCCACACTGTGGTCCAGGATTACTCCTATTTCTTCTTCCTCAGGATGGATAAGGAATATAACCTCTAGCCTCATGGAGTCAATTTCCAAGATGCCATCTTTCTAGACACTCTAGAGAACAGAAGGATGTTTTCCAGCCTTCAAATTGTTTGCAAAGGCAGCAGCTGGCGACCTTCTCCAATGACTGGGAGGTCCAAGAAGACACCAGGCCCAGGTACCACATCTGAGAGAAGGGCCTTGGAAAGATCCACAAAGCTGCCAGCATGGGCAATGTAGCCAAAGTGCAGCATATTCTCTTGCTCGGAAATAATCGCCTAAACGATGGAGACACGATGAACAGGACTACCCTCCACTTGGCCTGTGCCAATGGTCATTCAGCGGGGGTAACTCTCCTCCTGGAGAGAAAAATACCTTCCTAACCTCTGAAAAGAGGACAGTGCTGATGAAGGCTGTAGAATGTCAAGCAGAGGAGTTTGCAACTATTCTGCTGGAGCACGGTGCCAACCCAAATGTCACAAACGTCAGCAGCAGCACTGCTCTCAACTATACTGCCTTTTGCCAGAATATATCACTTGCAGCAGAGCTGCTTTCATACGATGCCAATAACAGAAGCCAGGAATAAGGATGACCTCACACCACTGTTACTACAAGTGAAAGGAAACAGCAAATGTTTGGAGTTTTTAGTACAGAAAGAAGCAAATATATATGTGGTTGATAAGATGAAAAGAACAGCCCTCATTCTTGCTGTTATGAGTCAAATGCAGTCAGTCTTCTTCAGCAAGGTGTTAACATCTTTTCTCAAGATGTTTTTGGATGGACTGCTGAAGAATGTGCTGTTGTTAGTGGTGTTATTATTCACCAACTGATTACTGACTATAAAGAAAAGAGACACCTCCCGAAAATAGTTGAAGAAGAAAAGCAGCAGAACAAAAGTAGTGAAATGCAAGTATCCGACAACATATGTGATGCTGCTGAAGACTGGATTCGTTCAGCAGAGAAAGATGGTCTACTGCATGTGAATGATGACAGTATTTTAAGTAAAGTGGATCAGGATGATGGCAAGCCTGCAAAGAAAATATCTAGTGAACAGAACAAGGTTGAAGAACAAACTAATTCTGTGGATGACCTTGATGACTTAATTCAGTCATCTGAAACCACTTCCAAGGATGGCGAGTTGAATTCCATATTGCTACATAAACAACTGGGCATGAGGTGTAAAGATTCTGTTAGCTTGTTGAAAATTTGGGGTGCAATTCTTTCTATAAAAGATTAGTAGAATTTTTAAAAAGCCACTGTGAACTACTTAGAGGAAAAATTAAAATGGAAAGTAAGGTTAGTGGGCTACAGAAAGAGTTGTCAAGAAACAAAAGAAGTGAAATCACAGAGCAACAGAGAGTGGAGTGGGAACGAGAGCTCCTCAGCTCGAGATGAACAGTCTCTTGGACTCTGTGGGAGAGGGAGAGGGAGAGGGTGGGATGATTTGGGAGAATGGCATTGAAACGTGTATAATATAAGAAATGAATCGCCAGTCCAGGTTCGATGCAGGATACAGGATGCTTGGGGCTGGTGCACTGGGGTGACCCAGAGGGATGGTATGGGGAGGGAGGTGGAAGGGGGTTCAGGATTGGGAACACGTGTACACCCGTGGCAGATTCATGTTGATGTATGGCAAAACCAATACAATATTGTAAAGTAAAAAAAAATAATAATAATAAAGCAAGAAGAAGAGAAGAGAAAAAGTCTGGTATGTTATATGAAAAAATTAGGGAGCAGTTAAGAAGAAAAGATTGGTAAGAAGTTGAAATAAAACAACTTGAGTTCACTCTCAGAGCACTAGAAATAAAACTGAAGACTGTGAAAAATAATCTGAATCAGGCTGTAAAAATGAGAAATGACATCAGAAGCAGCTTTCTCGAGAATGGAATGCAAGAATCTTACAGAATGGGAATCCTGACCTTGCCAAACGAAAGGAGATAGAAATGGCTAATAAGGAAATGAACTCGAGTCTATGTCAGAGGATTCACTGGAGGTGACTCATGTTATTGTGCTAACTTAGAAGATGAGCCACAGGATTTAAAGAAGACGTTATGTCAACTCACAAGTCAGATGCAAAAAGCACAGGATCAACGTACGAGGCCCTGAGATGTGCTGAGAAAACACAGGATCATATCCAAAAACTTGAAATTGAAAATGCAAGTTTAAAACCACAGGTCAAAAAGCAAGCAGGCAAAATTGAACAGCTTCAGAAAAACCTGTTAAGTACAAATTCGACTGATGATCTTACAGCAGAGCTAGAAACTGCATCTTCAAAATGTCTGCACCTGGATGCAAAAAGTCAAGTTCTTCGACAGGAGTTATTATCTATGAAAGAAATGCAAAAGAAACATGAAAAACTAGAAAAGAATAAAAAGAAGTTGGAGCAAGAAGTAGTGAACCTCAAAAGTCATACAGAAATGAATATGATGGAACACAGTCAAGCAGAGCAGTATAAAACAGTAGACTGAAGAAAGAGCAAGACAGGCTCTAGTAAACTAAAAGAAGTCAACCTACTTTTGTAGATATAAGCAGCATCTCAAGAAAACTTAGAGCAATCATGAAATTAGAATAATGCTTGAATAAGAAGTCGGATCCTAAAGGAAATACTAAAGGAATTCATCAATCCTAAAGGAATCCTAAAGGAATTAGTCAATCCTAAAGGAAACCAGTCCTCAATATTCACTGGAAGGACTGATGCTGAAGTTCCAATACTGTGACCGCCTGATGTGAAGAACTGACTCACTGGAAAAGACCCTGATGCTGGAAAAGACTGAAGGTGGGAGGAGAAGGGGACAACAGAGGATGAGATGGTTGGATGGCATCACTGACTCGATGGTCATTGAGTTTGAGCAAGCTCCGGGAGTTGGTGATGGACAGGAGACCTGGCGTGCTGCAGTCCATGGGGTCGCAAACAGTCGGACACAACTGAGCGACTGAACTGAAGAAGTCAGATGCAACTCAGCATTACAGACTTGGAATCTGAACTCTCCAAGATGGAAACCTTTTAAGAAATTTCTAATAAAAAGCAGAATTGGGAAAATATAAGCAACTCTACCTAGGAGAACTAAAAGTTAGAAAGTCATTGGCAATTAAACTAGACAAAACTAATGAACGGCAGGCAGAGATCAGAATATAAGTGGAGAACTAGAAGAAGCTGCTGCTGAATTTGAATCTGGATCCCATAGAGTGTCTCCTCTAGGATCCACAGATGAGTCAAATCTATATCAGGACCCACTTTTGAAAACATCACAAGAGTATGTACAGATTTTGAAGAAAAAATATATGATCTAAAGGATAAACAGTCAAAATTTCCCTACTGGACTGTTTATATTACATATTCACTTTTTCCCATTAAACATGATGAAAAAATCTTTCTTAAAGGAAAATATTTTTGTGAGGAAAAAAAAAAAAGAACTTTAGGCAATGTCAACATTCTCTGAAGTGTTTCCCCAATCTTAGATACTGGGGAGATAGGAATAAGAAATACTGCTTTCTTTTTACAGTATTAATAATGATTTAAATTGGTTTTAACACCAATAATCATCTTTTAAAAGAAAACTAAAATGATCTACATAAATATGGGCAATTCCCACTATAGCAAAAACATTTTTAGCAACCATGACCAAACATTTAAAAATAAAGCACACACTGCCAAACAGTTAATAACACCAGCCAGTAG EMBV3_33324 TCATCATTGTAGCCATCCTGGTGAGCACGGTGAAATCCAAGAGACGAGAGCACTCCAATG Gene GeneID:768025|KCNE2:NM_001077084:64_cdna Constitutive 0 NULL GeneID:768025 1 GENE KCNE2 MGC137046 potassium voltage-gated channel, Isk-related family, member 2 EMBV3_33013 CAGATCCAGCCGCTTATTGGATGTCTCCACCGCGAGGCCGAGCAGAGAACAGAATTGATT Gene BVT0102_043526 + 0 NULL GK000025.2:38601668-38638464 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145530 1 XLOC_088859 Coding TCONS_00145530 XLOC_088859 NonCoding Coding - 25:38632363-38633325 - TSS109040 962 3 TCONS_00145530_4 52 1 0 0.00114559439190431 0.00410573945943948 0.00336608680935059 0.000280704479373984 0.000773921229597428 0.00120699949497487 0.000642578869465732 0.000313566175685592 0.000354483034404269 0.000136864554807156 9.51845056522072e-06 7.06216938829563e-05 0.000712845912962311 7.19022496682608e-05 6.10025301733661e-05 0 0 0 0.000798292782080729 0.000725123417902811 0.000557914967088678 0 0 0 0.00163546369848802 0.00344217503109084 0.00263498105989871 9.98458891784346e-06 0.000125928960103845 0 0 noncoding 0 0 0 0 NACAGTAAAATTAGAGCTACTTAGATATAGGGGGAGCATGTAAGATTCTGAAGGGCGGGGGTGGGGGAGGGGCGCTAATGGAAGAAGAGGCATGGAGCGGGATGTTTGTAGGCAGTTTCGGCTGGGCCCTAAGAGCAAAGGGAACTGGAGGCCTTCCGTGCCAGGAAGAGCAGACTTTTCTGTGGGTCAAGAAAGTAGCTAAAGGCTCTTAGGAAGGGAGCGACATCTGACCTGTGTTTTTTTAAAAAGAGGATCCGGGCCACAAGTGTGAAGGTTGAAAGTGGACAGCAGAGTGACTGGAAGGAAGCGAGCGGCCAGGCTAGGAAGGGACGAGAGTCCCCCTGGGTAGGTTCAGGTGGAAGTGACTTGATGTAGTAGGGTCGGGAGAAGGAGAGAGACAGAGGAAGCACTCAAGTTAGTGCAGTAGAGGGCCGCGTCTGCTCATCAAAGCAGGGAACCACACGGGGAGGAGCAGGCTGGTGGTGGTGGAAGGCAGATGCCACAATCAATTCTGTTCTCTGCTCGGCCTCGCGGTGGAGACATCCAATAAGCGGCTGGATCTGGCCCTCAGGAACAAGAGCCGGTCTAGCTGCCCCCACAGAAGGCGCTCGGCTCGGAGCTGAGATGATCCCGTGGCGGGATGGGTCGGGCCGGGGTGGTGGTTGGGGGTCTGCCTCTTCTGGAGCCCGGGTGGAAAATTCTCCGCTTGCAGGAACACGGCTGGAGAAGTCCGAAGGTCCCCCGCTGGCTCCTGCGTCCTTAAATGCCGGGTCGCTAGGCTGAGGAGAATCTCTCCCGGAGCCCTGCCGTTTTAGGGTGGGGGGAACCCAGGTGTCCCCGCGTGGTCGCGTCCCCCCGGCGCGGGCCAGACAGGGCACACGCCGGGCTGAGGCGGGGGGCGCTCTCGGGCCTCACCTCCCGCCCTGCGGCCGCTGGGGAAGGACCTCAGCGCACCCGCGCCG TCONS_00145532 s 5' 0 TCONS_00145532 s 5' 0 EMBV3_25297 GCTACATCTGTCCATTGTCACTACCACTTCAGGAAACAGTCTGTTCATTTTCCCCTTGGC Gene GeneID:534363|NIPSNAP3A:NM_001080298:24_cdna Constitutive 3 NULL GeneID:534363 8 GENE NIPSNAP3A MGC140274 nipsnap homolog 3A (C. elegans) EMBV3_13286 GGGTGGGAATGGTCGTGGTGGGAGAGAGAAACATCATTGTTGGGGCTGAGAGAAAAGAGA Gene BVV0102_324824 + 0 NULL GK000011.2:107159422-107161082 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034429 1 XLOC_020662 NonCoding TCONS_00034429 XLOC_020662 NonCoding NonCoding - 11:107159540-107160811 - TSS25428 1271 1 TCONS_00034429_3 137 0.0889063729346971 1 0 0.000331846157839289 0.000229272725245755 0.00037132435687716 4.57349656919512e-05 0.000334065129909397 5.62872822022014e-06 9.17656817589844e-06 0.000241986852939627 7.44937565644101e-05 9.06421812589346e-05 2.70163584694216e-05 1.40664142567384e-05 9.02999619315811e-06 0.000292380566445311 0.000189145500638875 6.23405080273724e-05 0 9.87053118765111e-05 0.000220036871397299 0.000678970597880806 0.000382152794599268 0.000817383964970012 7.21797203821226e-06 0.00073864724270328 0.000365231415363236 0.000365855340405728 3.68789705148899e-05 3.77858873193124e-05 0.000469800764095588 4.73032750559928e-06 XM_005200932.1 BET1L PREDICTED: Bos taurus blocked early in transport 1 homolog (S. cerevisiae)-like (BET1L), transcript variant X1, mRNA. 0.0 2293 100.00 0.999213217938631 XM_005253052.1 RIC8A PREDICTED: Homo sapiens RIC8 guanine nucleotide exchange factor A (RIC8A), transcript variant X1, mRNA. 8e-16 89.7 71.29 0.158929976396538 0 noncoding TGACTTGGGGATGGGGCTGGCGTTTACTCTCGGGACTTCCGGATGATTTGTGTTTTTAGAGGCAACTATGGTGCCGACAGACACTCCAGCAGCCATTCCCCCCTAAGGCGGTATCCGGGTCCTAACCGGGAAGAGCACACGGGCCTTTCCCTGGCCAAAGAGGCTCCTCGCCGCGACCCAGCGGGGGTTGAGGCCTGGAGCGAACTCGGTGGGAAGCCCGGTTCCAGTTACTGCCGGCAGGACAAACTGCCTAGAGATCAGTGCCTAGAAAGTGCCTGGAACGAGCGAGCGGTGCAGAAGTCGCAGGAGTGAAGCCCTCCGAAGAAAACAAGAAACCAAGAAGAGGGGTGGGAGCGTGAGGGAAGTGGGTAAGGTAGGAGCCAGTGCTTTTTGGCCTTGCACGCGGTGCTGACAAGGGGCGTGACAAAGTAGATGCTTAACAAAGCCTTCTTGCCCGGTGGATGGATTATATTTATAAGTTACCCACCCATCGTAATGGAGCAATTGCTGTGTCATTTACTCGACAATCCACTGAAATGGGAACTTTTATCATCTCCGCTTTTCAAAAGGAACAGTCCAAGCAGACCAGCAGGTGTGCCGGCTCACACAGCAGTGAAGTCACCGCACACAATCAGACGGTCTTCATCCTGACCTCCCTCCCCAGTCTCTCTTTTCTCTCAGCCCCAACAATGATGTTTCTCTCTCCCACCACGGCCATTCCCACCCTTGCACTGGCCACTCCTGCCTTGCAAAACCTTCCTTCAGAGCCTTTCCTGGCTCACTCCTTGGGCTCCGGTCTCAGCAAAAACTGGCACTTCTTCAGATCTCCTTGCAGCCCATCAAGCCCCTTTTCTTATTCAATCACAGCACTATAGCTGCCTAACGTTGTCCTGTTTGCCCGTTTTGGTCTTCACGTCTGGCACATAAGCGCCAAGAAGGCAGGGACCTGTGGGTTCTATTCACCCGCATCCCGGCTCCTCGCATGCAGTAGGCACTCAAACATCTGTTTAGAAACCAAGTGGTCCGGAGGTTGTAAAGTCCTTCCCCCCTCGACTTTTCCCTGGACATTTCACTCGTTCTGTGCATCAAGAGGGGTGTTGGTGTGCATGTGATGGAGAGGTGCGCGGCTGAGGCCCTCTCCGGTCAGGAATCCTAGCCCAAGGAGTGAGGCTCACCGCTCGGTTCAGGGCGATTCCGGCCCATAGGTCGGACGATCACCGACCCGGAGCTTAAGGCCAAAGCTGACTCGGCAGCAAAGCCTTCAAGTTCTA TCONS_00029509 . 5' 108 TCONS_00029509 . 5' 108 EMBV3_21984 AGGATAGTGACCTCTCACCTGAAGAACGAGGATCTGCTACAAGTGACCAACTGCAAAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15162 GGGTCACAAAGAGTTGGACACTACTGAGCTCCCTGTAACCACCACCCTAAATTTTATAGC Gene BVT0102_307540 + 1 EMBV3_43740 GK000016.2:35733188-35747261 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00072289 1 XLOC_044058 NonCoding TCONS_00072289 XLOC_044058 NonCoding NonCoding - 16:35742266-35743719 - TSS54133 1453 2 TCONS_00072289_2 55 0.5712319339298 1 0 1.87277296870741e-05 0.000262794276594234 0 0 0 0 2.00677811538222e-05 0 1.0860468265539e-05 0 0 4.42962296671809e-05 0 0 0 0.000109063435294202 0 0 0 0 0 5.10713932799706e-05 5.68247187645668e-05 5.76897805791345e-05 4.76839746000125e-06 9.69782165177671e-06 0 2.64423331384988e-05 6.68220474495086e-06 0 XR_226704.1 LOC101909678 PREDICTED: Bos taurus uncharacterized LOC101909678 (LOC101909678), 3e-41 174 90.62 0.0867171369580179 0 noncoding 0 0 0 0 0.0487520779344244 0.644778660189382 0.0194805747987925 0.699183114748278 GTTGGGGGAATGTCAGCAGAGAGACAGAAACTGTAAGTTAGAAATACAAGAAATAAAAACAAAAAGCAGAATAACCCAGATGAAGAGTCAGGGAAAGAATTGGTTAACTAGAAAATGGGTTCATAGCAATTACCCAAACTGAAAAACGGAGTAGAAAGTAAACGTAACAGCCCTAATAGCTATGTGACAACTTATAGCTTTCTAATGTGTGCAGCTGGAACCCCAGAAGAAGAGAGAATGGGACCTATATAGGGAAGTGAGACCGAGTTCAATTTGTTGTCACTTTATCCCATCTTTTCCTCCTTGTACTTTCACTGTGCTTCATGTCTTTCAAGAACAGAGGTTGTCTGGTGCCGACTGTCCAGTTAACTTTTGGAAACGAGGATAGTTGCTGGATTCCGTGCCCAAGGCACAGGATGTGTATCACTGAATTGTGGCAGGGCCTATAGTCTAAGGTACGTATTTTAACATTTTTAAGAACAGTGTATACCTTAAAGTTGATGGAGTTTATTCCCAACGGTACATAAATTAATGATGCCTCTTACAATCATATTTTCAATTTGATGGAATACTATTAAAATAATATGATTTAAAAAAATTGTTGTATGGCAGAAACCAACACACCATTGTAAACATTTTAACAAATATTTACATAAATGAAAAAAACAGAATATGAAGGGCCACACAAAACAAGTAAATGGCCTAATAAATTAGAAGGCCACCATTTTACTTTCTGACATCAATACCCTAATAAGCTATTATGAGCAAACCTTGTCATAATTCGAGAAACCTGGGTTCAATCCCTGAGCTGGGAAGATCCCTTGGAGAAGGGAAAGACTATCCACTCCAGTATTCTGGCCTGGAGAATTCCATGAACTCTATAGTCCATAGGGTCACAAAGAGTTGGACACTACTGAGCTCCCTGTAACCACCACCCTAAATTTTATAGCTATCGCTTCCTTATATTTCTCTTATTGTCTAATCACCAGAGTGGGCCTCCCTAAATAATTTAGTTTTGTCCTTTTTTTAATATGGACTTTTCCTCTCCCTTTCCTTAAAATTTATCTGTTGAGAATCCAAAGGCATTTAATCTGTAATTTCTTGCTGTCTGAATTTTGCTAATTGCACACTCAGGTTGCAGTTCCCTATTTCCTCTGTCCTCTGTATTTTCTGCAATTCTGCAGTTGGATCCAGAGGAATGATGTCTCATCTCCAATCCCGTGGCAAGACTAGAGGATGCTGAGTTCTTTCATTAAGAGAAATGAAATGTCTAGTTACAATGTTAATAGCAGCTGACACTCTAAACCTAAATCCATTAATCCACTGGGGATTGCAAAACAGTAATATCTCTTTTTCATTGTTAGAGCACTAAAAAGAGATTTATCTTCTGTTTGGTAACCCACTGGTACAGTATAAAGATGGGCATTCCTTGTAACTCAGTTGGTAAAGAATC TCONS_00069084 TCONS_00069081 TCONS_00069082 TCONS_00069083 TCONS_00069085 TCONS_00069086 TCONS_00069087 TCONS_00069088 . 3' 514 TCONS_00069084 TCONS_00069081 TCONS_00069082 TCONS_00069083 TCONS_00069085 TCONS_00069086 TCONS_00069087 TCONS_00069088 . 3' 1966 EMBV3_39195 ATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTTTGAAAGGAG Gene BVT0101_076919 + 1 EMBV3_26653 GK000005.2:76808970-77370782 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00210178 TCONS_00233373 TCONS_00010367 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00056147 TCONS_00250553 TCONS_00019991 TCONS_00189806 TCONS_00165811 TCONS_00032587 TCONS_00197973 TCONS_00141355 TCONS_00250544 TCONS_00239410 TCONS_00141464 TCONS_00177994 19 XLOC_131641 XLOC_128688 XLOC_142855 XLOC_005918 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_033950 XLOC_153496 XLOC_010669 XLOC_115843 XLOC_100651 XLOC_018827 XLOC_119632 XLOC_085783 XLOC_153487 XLOC_146076 XLOC_085892 XLOC_107767 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_07736 CTCTCTCCGAGAACTGACGGTGCCACCACCGGCGCCTCGAGGGCCGGGCAGAACCGCATT Variant GeneID:614210|RNF166:NM_001099134:415_cdna 766^829 2 EMBV3_14699 GeneID:614210 18 GENE RNF166 MGC160024 ring finger protein 166 EMBV3_42707 CCTACCAGGCACTGCTACACCCTTGTCAACAAACTAGACCTCTCCTATGATTCAGCTCTG Gene GeneID:532174|MAGEB18:XM_002700321:29_cdna Constitutive 0 NULL GeneID:532174 X GENE MAGEB18 NULL melanoma antigen family B, 18 EMBV3_37293 GACTCATATACTAGAATTCAGATCATGAACGGCTGATGGAATAATTCTTTTGGACAGTCC Gene GeneID:510767|CYCS:NM_001046061:4_cdna Constitutive 0 NULL GeneID:510767 4 GENE CYCS MGC128356 cytochrome c, somatic EMBV3_04800 CAAGGACCGTGCTCCGTTCAAGATAACTCTTCTGCTGGGCTACAATGTCTTCCTGCTCAT Gene GeneID:616094|HTR3E:XM_002684893:128_cdna UTR3_Alt 2 NULL GeneID:616094 1 GENE HTR3E NULL 5-hydroxytryptamine (serotonin) receptor 3, family member E EMBV3_12633 TTGATTGATCGAACCAGTAGAAACCGCTGCCAGCAAGGCAGACTCTGCCGTCAGCAGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16781 ACGGCACTGCTGGAGGCGAACTCCACGCCGGTGCGTGTCTACAGCCCGTACCAGGACTAC Variant GeneID:511885|PLEKHB1:NM_001113280:4_cdna 493^597 5 EMBV3_13742 GeneID:511885 15 GENE PLEKHB1 MGC128483 pleckstrin homology domain containing, family B (evectins) member 1 EMBV3_10836 AGGCCTCGGCATATTTGCAGTAGAAGTGGCACCAAACTCTACAATGGTCTGTCAACATGT Gene GeneID:505160|EFCAB7:XM_002686340:87_cdna Constitutive 0 NULL GeneID:505160 3 GENE EFCAB7 NULL EF-hand calcium binding domain 7 EMBV3_13511 GTGTGGTAACACTCAGAGCTGCCCTTCTTGTAGCCCCTTGCCTAGTACTGATAAAATTCC Gene GeneID:781444|LOC781444:XM_002693290:92_cdna Constitutive 0 NULL GeneID:781444 15 GENE LOC781444 NULL similar to Olfactory receptor 52A1 (Olfactory receptor OR11-319) (HPFH1OR) (Odorant receptor HOR3beta4) EMBV3_19766 CAGGCAGCTTGATTCCCCGACTTCCCAGCGTCGAGCCTGGACTCGAGCAGCAGCTACGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33835 AGCGGCTGGCATTAGCTCCGCCCGCCTGCCTTCCTGTTTTCATATGCAATATCAATCACA Gene GeneID:528201|ANO8:XM_002688544:159_cdna Constitutive 0 NULL GeneID:528201 7 GENE ANO8 NULL anoctamin 8 EMBV3_29192 TGAACTTCAACTTCTTGCCAAGGAAACTTGTCTCAAGGGAAAAGCAGTTTTCTAGGGGGC Gene GeneID:615668|CCDC117:NM_001105634:98_cdna Constitutive 2 NULL GeneID:615668 17 GENE CCDC117 MGC166149 coiled-coil domain containing 117 EMBV3_21955 GGAAGCTATCCCTCTTCTAATCTGCAAACCTCAGTACCCTGAACTCCCCTGTACACACAC Gene GeneID:534319|NID1:NM_001101155:90_cdna Constitutive 0 NULL GeneID:534319 28 GENE NID1 NULL nidogen 1 EMBV3_09552 CCATGTACCAAGCATTGTGCTAAAGACTGGTGATTCAGTGGTACGCGAGCCCTATAGGAC Gene GeneID:281536|TLR4:NM_174198:20_cdna Constitutive 1 NULL GeneID:281536 8 GENE TLR4 NULL toll-like receptor 4 EMBV3_24264 CTTGGGTAATGGAGGAACTTCAGCCAAAATTAATATACCAGGAGCCACTAACGGCCTAAC Gene BVT0102_147207 + 1 EMBV3_20062 GK000018.2:1620809-1655993 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25456 CCCTCACTACCTCTTCACAGTTCTCAACGCCTCCCAGGGTGTCTTCATCTTACTGTTTGG Gene GeneID:522893|GPR113:XM_002691502:462_cdna Constitutive 0 NULL GeneID:522893 11 GENE GPR113 NULL G protein-coupled receptor 113 EMBV3_04571 CTCTGACCGAGCCCACAGGTGCCAGGCGTTGTGCTTGATGATTGCACACATGTTAAACCA Gene BVT0102_087331 + 1 EMBV3_23289 GK000009.2:90448997-90484031 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236257 TCONS_00236258 TCONS_00236256 1 XLOC_144421 NonCoding TCONS_00236257 XLOC_144421 NonCoding NonCoding SYNE1 9:90470071-90475188 x TSS176894 1900 3 TCONS_00236257_1 51 0.207368421052632 4 0.629397967161845 2.91257034939785e-11 0 3.21515430430423e-08 3.28316065302688e-08 0 0 0 0 0 0.000346424692403314 0.000557153108525464 9.30009104045056e-05 4.14557038171882e-08 4.05370689320715e-08 0 0 0 0 0 7.63043850852887e-11 0 0.000218714519313025 5.45437747962645e-16 3.39392684094649e-259 0 0 0 5.22432195108125e-05 0.000155537462860022 7.40115533870312e-05 XM_002705239.3 SYNE1 PREDICTED: Bos taurus spectrin repeat containing, nuclear envelope 1 (SYNE1), mRNA. 8e-88 329 98.42 0.0994736842105263 XM_005266877.1 SYNE1 PREDICTED: Homo sapiens spectrin repeat containing, nuclear envelope 1 (SYNE1), transcript variant X1, mRNA. 2e-58 232 88.40 0.0947368421052632 0 noncoding AATGCTTTGCTGAAACCCTTCGAGACGTTATGGGTTTTTTGGACATGAGCCATCTGCTTCCTTGTTGTCTGCTTCAAACTCCAACGTATGGTATTGTGTGACCTCACCATGCATCAGGCATAAGAGGGTAACATTCATAGTCAAGAAGGCTCATTAGAGCATCGTGGAGACTCTGTAAACGAATTTTGATCACCTGTCGCAGCTCCTCAGTCTCCCGTCCCAGGTCTGCCACTTGCTGAGACATTGTTTCTGTATGGTACACACTATCGAGGTACTGTAATTTCTCGGTCATTGCTTCCAGATCATTGTGAATATCTTCAGATTCTTCTAGCATGGTCTAGAGTGAATTATCAACATCCAGGACATTGATAGATGGAGAGGAAAAGGAAAGACCTTTTATGCTGATGGGACAGCATAAGCAAAGGCACAGAGATCCTCAAACAGAACAACTCTGCAATTGTTTAAGAAAGACTTCTTGAGAGGAGAGTGCAAGATTGATTAGAGAAGAAAGATAAATACAGGGAGACTAATTAGGAGCCCGTTAAAGCATTCCCAGAAGGGGAAAATGAGGTTTTGATCTAGAACTCTGTCAACACAAATGGAAAAGAGGATGTATTTAAAAGACAAGAGTATACATAAATCAGAACAAAAAAGAAAATCTAACATACTTGAGGATATCCATGTAACTTAAACAAGGACCATTTTGTATTTGATGGCCTGATAACTGGGCTAAAAGATACCTATATCTAACTCAAGCCTAAATTTAAAAAGATGAAATAATTTCCTGGATGATATGGCCAAGAGAAAACTTCAGAGGAAGTGAAGTCATGCAGCCTCCATGTGGTGTGGACTTATTCCAGCTGGCCCCTACTTCCTGCAGGAGGTCAGTTCCCTGTGACCAGGCGGAAGCGCTGGAAGGAGGAGGCATGAGATTCAGGCTCTGACCGAGCCCACAGGTGCCAGGCGTTGTGCTTGATGATTGCACATATGTTAAACCATTTGATCCTCGTGACAACTCTGCAATATGCATATTATTTACATCTCCATCTTACTGATGAGAAGACTGGATTCTGAAAGGCAAAGTAGTTTGCTCCAAAGTACACAGCCCTAAGTGGCAGGACTTGGTTTTCCCATCAGTCTGAGTCTAGAGCTTGTGATCTTTCCACCTGTCCCTGCATCTCCTCCTAAGGGTAGAATTTCCCACCATATCCCTGTGTAAAATTGTTTCAAAGAAGCTGCAAAAAAAAAAAAAAGATACTACATGGATGATTATTTTTGGTCTTGGGGAATGGAAAATTTAGAGGTGATAGAGGATATTTATTTACTTATTCATGGGTAGCTGCTTTTTTTTTTTTTTTCAATCCCCAGGACAAGTTGTTAAAGCTACCTTGGCTTTCATTTTTCTTGGCATCTTCAATAATTTTTCATCACATTCTTCCAAATTTTCTGTCAATCTAGCCAGTTAAATCAAATTACCCTCTTAGTTACCTTTTGAAAACTATTTTTGCTAAAGTTACCTGATGTGAAATGTATTGTTCTCGAAGCTGGCTTGCAGAATTCCATGCAATCTTTCCATGTACCAAGATTTTGGTTTTTTCAATCCACCTTAAAATTAACTCAAGTATTTCATTGTATTCTTCTAGATGGGATGCTGCCTGAAAAATAAATCATTACCATTCAGATAAAAAATGGATACTCTGCTTCTTGAGCTAGAAATCAGTCTTCTATTTCTCTTTGGATACAACAATCCTGGCAGTTGATCATTATAATATCTATGATATCTAAAGGTATCATGAAAAATAATTTCCTTATTGAAAACCTATTAAAGACTTCCCAGTGATGTTAGGATGAAGTCCAATTTCCTAATATGCTTGAATAATCTGTCTTAAAAAAAAATCTC TCONS_00238013 TCONS_00238013 r 5' 0 TCONS_00238010 TCONS_00238011 TCONS_00238012 TCONS_00238013 r 3' 635 EMBV3_24514 AGGTTTAAGCAGAAGAAGAGAGGGTTGATATTTTTGCACATGCTGCAGCAGCAGTCTCCT Gene GeneID:512445|ZNF187:NM_001101957:13_cdna Constitutive 3 NULL GeneID:512445 23 GENE ZNF187 MGC151668 zinc finger protein 187 EMBV3_31680 CTGCTCTCTGGCTTGAGTTGTTCCTACCTGGATGTCACAGCATCCCAGCCCAAGTCTAAA Gene BVV0102_145096 + 0 NULL GK000015.2:55043624-55067303 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30333 GCTCTGGTCTCTGACCCTTGCAGTCTTCAGGAGATACAATATTCATTATTCTGAGGAAGC Variant GeneID:533333|ELOVL6:NM_001102155:62_cdna 301^452 2 EMBV3_30961 GeneID:533333 6 GENE ELOVL6 MGC139109 ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) EMBV3_15638 CCAAGCCTTTGATGCCACATTCTGACACTGGAATGCAGCTCTATGCAAACCCACCGAATC Gene GeneID:524159|LOC524159:XM_002691823:505_cdna Constitutive 0 NULL GeneID:524159 12 GENE LOC524159 NULL similar to F11C1.5a EMBV3_32240 GAAATGAGTGCTGACACGATGAGTGACATGAGTTCTGTAAGCCTGGAGATGGGTCTTGGC Gene GeneID:100297068|LOC100297068:XM_002700144:10_cdna Constitutive 0 NULL GeneID:100297068 X GENE LOC100297068 NULL similar to testis expressed 264 EMBV3_00550 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:100299996|LOC100299996:XM_002683778:3_cdna Constitutive 0 NULL GeneID:100299996 19 GENE LOC100299996 NULL similar to histone cluster 1, H2bl EMBV3_43032 ACCAGATGACTTTGGCTCTGACCCCAGAGACCCACCCAATTTCTACCGTTATGCAGGCAT Gene GeneID:617420|ISG12(B):NM_001076457:306_cdna Constitutive 0 NULL GeneID:617420 21 GENE ISG12(B) NULL similar to TLH29 protein precursor EMBV3_21611 GCCTATAGACTGGAGACTGGAGGGTTGCACTTGGACTGTGGTTTATTATGACAACAATCA Gene GeneID:767844|B3GALNT1:NM_001076963:167_cdna Constitutive 1 NULL GeneID:767844 1 GENE B3GALNT1 MGC140658 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) EMBV3_05076 ACGTTAAAATCGTGTTGTACTTCAATATAATTCTTAACTTGTTGTTGTTGATACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_08180 TTCCCAAGATCTGGCCTTTGCCCCTCCCCCTGCAGCCTCAATAACACGTTCTGACTATAA Gene GeneID:510680|HDHD3:NM_001014896:23_cdna Constitutive 0 NULL GeneID:510680 8 GENE HDHD3 NULL haloacid dehalogenase-like hydrolase domain containing 3 EMBV3_31981 GGACTCCATCTGCCTGACTGTTCTGTATATTCCAACTGGTTCAAAACTGCATCAGGGAAA Gene BVV0102_060489 + 0 NULL GK000001.2:97343998-97650782 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001628 1 XLOC_000400 NonCoding TCONS_00001628 XLOC_000400 NonCoding NonCoding - 1:97513710-97517381 - TSS835 649 2 TCONS_00001628_2 45 0.420647149460709 2 0.823705722070845 2.09640831346873e-05 0 0.000171106230055115 0 0 0.000655885260808872 0 0 0 0 0 0 0 0 0 0 0 0 0.000486164267287056 0.000166211894982259 0.000163713861141811 0 0 0 0 2.17118651133244e-05 0.000153475708890062 0 0 0 0 noncoding 0 0 0 0 -0.00504885870422944 0.974872664281496 0.0261362965197575 0.595778875158739 AAGCCTGTTCTTGCTGCTCTTAAACCACATTCACCATCTAGTCTTTATCAGCAAGAGGGATGATATTGATACATTGGACTCCATCTGCCTGACTGTTCTGTATATTCCAACTGGTTCAAAACTGCATCAGGGAAAAGGAGTATATCTACAGGCTCCCTAAAACCTCAGTAGGTTTGCAGACACAGTTGATATCACCCGTGTGTTATCATCTTGTCTTTGCCACAGCAGACAGATGGCAGTGTCTACAGGGCAGCCTCTGGCCCTTACAGGCTGTCACCCAGTAATCAATTGGATGTCCAGGAGAAAAGCCATCTGCAGTAAAATCTTCAATGTTGACTGATTTCCGTGGTGCAGACATCCACACCATTGCTGCTTTCAAGCGGCACTCAAGGCATCATTGAACAGAGTTGGGAGGAGACGGACACAATCTGCTCTCCACACCAGCAAGGCGCCAACTCAGCCGACTCTCTGCACCTCTCTGGAGCCAGGGCAACATCCCTCCAGAGAGGCAGATGGCTGAGTGCACGGCTAGATGCACCCCTCTCAGCTGGACTTCCTGTTTGGGGATTGTTTGCTACCCTGAGAACTGGCTCAAAGGCCAAACCTTTGTGCCATATTCAGTGGCCGCCCAATTCCATGAAGGGTCAAC TCONS_00001629 s 5' 133402 TCONS_00001629 s 5' 137072 EMBV3_43316 CTCCATGGGGTGCAGAGCAGTGGGGACCATGCACTTTCGTGAGAACTTTATCTCATGGAT Gene GeneID:537070|PMM1:NM_001076083:192_cdna Constitutive 1 NULL GeneID:537070 5 GENE PMM1 MGC142893 phosphomannomutase 1 EMBV3_32239 TACGCTATTTAACCATCATGAACCGGAGAGTGTGCCTTGGGCTTGTGACGCTTCCCTGGA Gene GeneID:784706|LOC784706:XM_002690757:507_cdna Constitutive 0 NULL GeneID:784706 10 GENE LOC784706 NULL similar to Olfactory receptor 4K3 (Olfactory receptor OR14-14) EMBV3_07592 CAGGAGAGATGCTATCAGTTTAGAATCGGAGCACCCGAGAGAGGCAGGCTGTTGTCATGA Gene GeneID:504880|OTUB2:NM_001015517:160_cdna Constitutive 1 NULL GeneID:504880 21 GENE OTUB2 NULL OTU domain, ubiquitin aldehyde binding 2 EMBV3_11848 AAGCGGCTGTGAAGCCTAAGAGCAGAAACATGGGGGTGAAGCTTGAGGTGTTTCGGATGA Gene GeneID:616224|LOC616224:XM_002688857:206_cdna Constitutive 0 NULL GeneID:616224 7 GENE LOC616224 NULL similar to HC12887 EMBV3_00004 TCTGGAGCATCGGCCAGAGCCGGCAGCGGTTTACAGGCTGGACCCCTGGGCTCAGATCCT Gene GeneID:100336536|LOC100336536:XM_002696798:533_cdna Constitutive 0 NULL GeneID:100336536 21 GENE LOC100336536 NULL hCG2029376-like EMBV3_26589 CTGGACTATAGCTTTCATCACCAGTCATTGGACTTTTGCAAAGTCGAGACCAGCTAAGGC Gene GeneID:614571|NXPH1:NM_001034762:50_cdna Constitutive 0 NULL GeneID:614571 4 GENE NXPH1 NULL neurexophilin 1 EMBV3_13853 GGAGTTAGAGAAAGAGACATCTGTGGAGTGTGGCATAGCATTTTCTCCCAAAGAAGTGGC Gene GeneID:617126|LOC617126:XM_002700184:61_cdna Constitutive 0 NULL GeneID:617126 X GENE LOC617126 NULL hypothetical LOC617126 EMBV3_12504 GAGATACAGCGCAAGGAGGGTTCTAAATCCAAACTCCGGACTAAATCCAAGACGAAACCC Gene GeneID:613754|LOC613754:XM_002694161:576_cdna Constitutive 0 NULL GeneID:613754 16 GENE LOC613754 NULL similar to chromosome 1 open reading frame 125 EMBV3_34766 GCTTTGGGAATTGAGGTGGATGTTGAAGATGGGTCAGTGTCTTTACAAGTTCCTGTATCC Gene GeneID:535869|RNF128:NM_001076071:5_cdna UTR3_Alt 2 NULL GeneID:535869 X GENE RNF128 MGC137489 ring finger protein 128 EMBV3_27935 GGAGCAAACTATTGTCCAGGAGGCCATGGAGGAAGTGGAGGTTATGGAGAGACAGCAATG Gene GeneID:538435|LOC538435:XM_002688850:186_cdna Constitutive 0 NULL GeneID:538435 7 GENE LOC538435 NULL similar to Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 / hnRNP B1) EMBV3_12585 CTCTCCCCCTATTCTCTCCAGCCTGTTACCTAATGTTCTACAGTCAGCTGTATCTACAGG Gene GeneID:100140419|ASXL2:XM_002691461:311_cdna Constitutive 0 NULL GeneID:100140419 11 GENE ASXL2 NULL additional sex combs like 2 (Drosophila) EMBV3_11796 GGCCTCGAGCTTCCACGTGGGACGGCCGTTCAGCTTGGAGGCTGTGCAGGGTTCTGCTAC Variant GeneID:514472|TRAP1:NM_001038675:162_cdna 195^251 1 EMBV3_01950 GeneID:514472 25 GENE TRAP1 MGC134161 TNF receptor-associated protein 1 EMBV3_42562 CTGTTTACAAGGGCGGTGACGTTTTCAAGAGTTGGACGGTGCCCCCCTGGATAATAGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41960 ATTTCCTGCCATGTTTGCCAGTGACTGCTGAAATCCAGTGTCTTGTACTTCTGAAACTAC Gene GeneID:100336919|LOC100336919:XM_002686915:139_cdna Constitutive 0 NULL GeneID:100336919 4 GENE LOC100336919 NULL hypothetical protein LOC100336919 EMBV3_21085 GGGGTCTCAGATCTCTGTGTGTTATGTGAGCTCCAGGCCCCACTCTTTAAACATCAGCTG Gene GeneID:508204|GREB1:XM_002691480:365_cdna Constitutive 0 NULL GeneID:508204 11 GENE GREB1 NULL growth regulation by estrogen in breast cancer 1 EMBV3_27425 AGATCACGAGCAGACTCTCAGACGCCAACTGCTGCCTAGACGCCATCTGCTACTACTTCA Gene GeneID:505056|GPR35:XM_002686591:55_cdna Constitutive 0 NULL GeneID:505056 3 GENE GPR35 NULL G protein-coupled receptor 35 EMBV3_36154 TTTTTCCGGAACCTCTGTGGACAGCCCGAGGTCTTCTTCCGTCACTGTTTCGTCCACAAC Gene GeneID:539771|SMUG1:NM_001014958:48_cdna Constitutive 0 NULL GeneID:539771 5 GENE SMUG1 NULL single-strand-selective monofunctional uracil-DNA glycosylase 1 EMBV3_33274 GCACCGCCAGACCATCCTAGAGTCCATCAGGTGGCCGGGCTGACGCTGCTGGCTGTTGGG Variant GeneID:784353|ATAD3B:NM_001105462:251_cdna 706^775 1 EMBV3_35073 GeneID:784353 16 GENE ATAD3B ATAD3 ATAD3A ATPase family, AAA domain containing 3B EMBV3_13727 CCACAAAAGCCAAACCAGCTCATTTCAACAAAGAAGCTCTGATGTGAGGGGCAAGGCTGC Gene GeneID:281168|FMOD:NM_174058:4_cdna Constitutive 0 NULL GeneID:281168 16 GENE FMOD MGC129053 fibromodulin EMBV3_07670 AGGGAGATCCTCAAATTCAAAGAGCGTGTACTGCCACCCCCTCCGTGTACCTGCTCTATA Variant GeneID:504880|OTUB2:NM_001015517:160_cdna 276^672 1 EMBV3_42292 GeneID:504880 21 GENE OTUB2 NULL OTU domain, ubiquitin aldehyde binding 2 EMBV3_27677 TAGCATTTACGGATCTGCTGTTTGCTTTAACCTCTTGGAGGAAAACCTGAGGGGGTGGGC Gene GeneID:618298|TMEM182:NM_001083784:66_cdna UTR3_Alt 2 NULL GeneID:618298 11 GENE TMEM182 MGC140262 transmembrane protein 182 EMBV3_32294 CGCTCCCCAGTACCCTCTTAAGTAACTGGCACTCCATGCATAGGCCTTTACCCATTTGGA Gene GeneID:100295148|LOC100295148:XM_002686505:643_cdna Constitutive 0 NULL GeneID:100295148 3 GENE LOC100295148 NULL hypothetical protein LOC100295148 EMBV3_36973 CTTTGCGCTGCCTGATTCACTGCTCGTGGTGCTGGACATGGACGAGGGCACACTCAGCTT Gene GeneID:512922|SPSB4:XM_002685041:109_cdna UTR3_Alt 2 NULL GeneID:512922 1 GENE SPSB4 NULL splA/ryanodine receptor domain and SOCS box containing 4 EMBV3_04573 GGTAGCTTCTCTCATTCTTCCTTCCCAGAGAGTGATACCGTCTGATGAGAAGAGCAAGGG Gene BVV0102_008078 - 1 EMBV3_20055 GK000003.2:22442579-22486869 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41703 AGGGAAGGAGGGAGAGACGGTGATAAGCTCTCTGTTCTCTGTTCCAGCCAACCTGGAATA Gene GeneID:513150|LYPD3:NM_001083419:205_cdna Constitutive 0 NULL GeneID:513150 18 GENE LYPD3 MGC139913 LY6/PLAUR domain containing 3 EMBV3_26776 AAGCGGGTCAAAGAGAACATACAGGTGATGATGAGTGAGACTGTGGGCAGAGGGCTCCTA Gene GeneID:538060|LOC538060:XM_002684759:245_cdna Constitutive 2 NULL GeneID:538060 1 GENE LOC538060 NULL similar to Aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) EMBV3_34579 ACAGACTACAGTTTTAGGAGTAACAGCTAAGGATGATTTTTCAGAATTGTCACCATACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27547 TCATGCTGGGCTACCTGTGCTCGTGCTTGAGCCTCATTGTCCGCGTGTCTCATCGGAAGT Gene GeneID:618771|LOC618771:XM_002699443:150_cdna Constitutive 0 NULL GeneID:618771 29 GENE LOC618771 NULL similar to Mas-related G-protein coupled receptor member G (G-protein coupled receptor 169) EMBV3_12635 CCTCAGGGCCTCCCCTGGCCCACGGAGCAGGGCCTCCCCCCAGACAGGGGGGGCTTGCGC Variant GeneID:615869|TRIP6:NM_001035469:302_cdna 214^341 2 EMBV3_08239 GeneID:615869 25 GENE TRIP6 MGC128885 thyroid hormone receptor interactor 6 EMBV3_19013 CGTGAGTCACCAAAATGATTGAACAGTCCTGGTGGGTAACTTCTAACAGAGCCATTCCTG Gene BVV0102_127028 + 0 NULL GK000006.2:6571526-6874054 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39059 CTCCCGCTTCAACGAGGACCGAGACTTTCAGGGTAATCACTTTGATCAATATGAAGAAGG Variant GeneID:534759|GPATCH8:XM_002696075:4_cdna 45^194 3 EMBV3_09057 GeneID:534759 19 GENE GPATCH8 NULL G patch domain containing 8 EMBV3_02490 GTTGCAGCCACACTCAGCCAAAAACACTTAATTTATGGATCCTGCCTCCTGCCACATGCC Gene GeneID:404124|ST6GALNAC2:NM_205791:13_cdna Constitutive 1 NULL GeneID:404124 11 GENE ST6GALNAC2 MGC143352 SIAT7B st6GalNAc-IV ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 EMBV3_10274 GCACTGCACTCATGAAGCTGTCTACCCATTACTATGCCTTCCCATACATTATATTAGTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13486 TGTGAAGACATTGGTGTTGAACCTGAAAATGTGTGACTGCACAGAAAAGTTACAGAACAA Variant GeneID:508759|DCUN1D5:NM_001046012:8_cdna 548^639 3 EMBV3_08519 GeneID:508759 15 GENE DCUN1D5 MGC137775 DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) EMBV3_04844 CCTTCTGTGAAGACAACATCATCCCACATTTCTTCTGTGACCTTGCTGCCCTGCTCAAGC Gene GeneID:787209|LOC787209:XM_002683720:5_cdna Constitutive 0 NULL GeneID:787209 11 GENE LOC787209 NULL similar to Olfactory receptor 1J4 (Olfactory receptor OR9-21) (HTPCRX01) EMBV3_42275 GTAATACGGACAATATTCAAGGCTCGCATTTACTGGTCAGGACTCGCATCCCTGGTGTCC Gene GeneID:751562|LOC751562:NM_001076526:164_cdna Constitutive 0 NULL GeneID:751562 23 GENE LOC751562 NULL prolactin-related protein 11 EMBV3_41186 AGTGACCAACGGCTCGGAAACTGGGACGGGTGACACAGCCTGGGAAAATAACGTCGACAA Gene BVV0102_208937 + 0 NULL GK000007.2:7883712-7899035 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215329 TCONS_00215327 TCONS_00215328 TCONS_00215332 TCONS_00215330 TCONS_00215331 1 XLOC_130895 Coding TCONS_00215332 XLOC_130895 Coding Coding LOC100848273 7:7885876-7896884 = TSS160833 1370 1 TCONS_00215332_3 395 7 0.876169710184428 0.0200257208062633 0.0122065893913803 0.025502954197936 0.00968126142857549 0.00765967594000577 0.00404180487072895 0.00530948077083656 0.00646749255896805 0.00639848007323942 2.98402124814738e-14 6.25701251679459e-08 8.60622685958705e-05 0.00177098451486528 0.00161719746992421 0.000452674264347249 9.83833425832272e-12 0 3.40910425978182e-12 0.00511724547610928 0.018538038190197 0.00590344772805958 4.82720202652116e-10 9.83384628798734e-12 0.000130735760139524 0.0162540747288334 0.0105218993070531 0.00826920238895022 1.44030886035293e-11 3.2921434309101e-05 8.27296592387522e-06 XM_005198837.1 HSH2D PREDICTED: Bos taurus hematopoietic SH2 domain containing (HSH2D), 0.0 2241 100.00 0.905839416058394 NM_032855.2 HSH2D Homo sapiens hematopoietic SH2 domain containing (HSH2D), mRNA. 2e-151 540 69.30 0.814598540145985 TCONS_00215332_3 sp|Q96JZ2|HSH2D_HUMAN HSH2D_HUMAN Hematopoietic SH2 domain-containing protein; 9e-127 374 57.92 0.863291139240506 1 coding 1 0 1 1 -1.33673049165596 0.0095653041249586 -0.0303938806253643 0.513590587180684 ATGGTGCCCACAGGTCGGGCTCGCCAGTGTCTGTGGAATGAACGAGTGAATGAATTGATAGAATGGAGGCATTGGAGCACAAACTTGCGGAGGCAGAGCCAGAGTGAGGGCCTTGGGCCCCACAGGGGTCTCCCAGGTCAGCCCTCACCCCTGGAAGCCATGACTGAGGCCAGAAGGCTGCCCCCACCACTGCCTCCACGACTGGACTGGTTCGTGCAGACGCAGGTGGACCAGCTGACCTGTGAAGGGGTCCCTGAGTGGTTCCACGGTGCCATCTCAAGAGAGGATGCTGAAAATTTACTGGAGTCACAGCCCCTGGGATCCTTCCTCATCAGGGTCAGTCACAGTCACGTGGGCTACACACTGTCTTACAAAGCTCAGAACTGCTGCCACCACTTCATGGTGAAACTGTTGGATGATGGGAGCTTCACGATCCCTGGGGAAGAGAGGGTCCATGACTCTCTAGATGCTTTGGTCACCTTCTATCAGCAGCAACCGCTGCGACCACATGGGGACCTGCTGATGCAGTCCTGCCCACAGAGGGATCCAGTAAATGTGGATTATGAAGATCTCTTCCTTTACTCCAACGCACTGGTTGAGGAAGACTCCAGCTCTGCTCTTGGCTTCAGTGAACATCAGATTCCCTCGTCTTATCCCATAGCCCCACTCAAGGAGGCCTCTGCAAAGCCAGGCCCGCTCCATCGGTCAAAGGAAAGGAAGCTGTCAGCAGGGCTGAAAGGTGCATCCATGGAGGGTCCTCTCGAGGAGGCTCGTCAGAAACTCTGGAGGAATCTCAGGATGCTCCCCAAGACGGGCAGGAAGGTCCAGAAGCAGCTGAAATCCCACCTGGCGACTTTGAGCTCATCGTCAGTGACCAACGGCTCGGAAACTGGGACGGGTGACACAGCCTGGGAAAATAACGTCGACAAGGACCCCTTTGTGGCCACATCCCTCGCAAGCCCCGCACAGCCCCAAGCTCCAAGAAACAGACAGGGCCCCTCCAGGAAAACCTCAAGGTCAGTCAGCTGGAACGAGGCAGCCTCGAAGGTCAAGGACTGGCACCAGACGGTGGTGAGGGTCCTGTCCTTACAGGCGTCCAAACCAGGCCCAGTGGACTTGAGAGAACCCCAGGACTCTCTCCCTGAGGAGTACCGTCCCCCGCCACCCTTCGCCCCTGGGTACTGCTAGGTTCGCCCTGGCTCTGGGACCCTCAATGCTGGGAGCTGTTCATGCCTGGGCCTCTTGCTTTCTGCCGTAACCCACTAGCCCTCAGGGACCTGAGAAATGTAATAAAAACATTGCTTGGGTCTGGTCCTATGATTGCCAGTGGGGCAACCTGGTCATTTTAATAATAATAATGAGGACTTCCC EMBV3_08795 GTGGTTTATAGCTGGTAAAGTGGGCTAGGAGTCAAGGGCAGGGAGTCATGTCGAGGAGAA Gene BVV0102_128126 + 1 EMBV3_18820 GK000009.2:85918332-85948709 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15305 CCCAGACAGCAGCCAGATTGGCATCCAGAGCACAGGGTAGAGCTCAAATGAGTCCAAAAA Gene GeneID:768003|C9H6orf94:NM_001077063:17_cdna Constitutive 1 NULL GeneID:768003 9 GENE C9H6orf94 C6orf94 MGC134184 chromosome 6 open reading frame 94 ortholog EMBV3_43020 TTTTTGAAATCTTTTGAGTAGAGCAGGCAGAGTGAGAAGAGTGGGGCCAGTCAGCAGGCC Gene GeneID:504832|OS9:NM_001034225:938_cdna Constitutive 0 NULL GeneID:504832 5 GENE OS9 MGC129074 osteosarcoma amplified 9, endoplasmic reticulum lectin EMBV3_42301 AATCAGTGCAGGCAAACCAAAAACGCCAGAGCAAGCACAGGGTCACAAATGTCCAGAAGG Gene BVV0102_360655 + 0 NULL GK000009.2:26856920-27540422 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234942 TCONS_00234941 1 XLOC_144131 NonCoding TCONS_00234942 XLOC_144131 NonCoding NonCoding - 9:26867695-26872163 - TSS176259 4468 1 TCONS_00234942_11 114 0.24395702775291 1 0 0.00206386855278134 0.00144870917776664 0.00254597620661262 0.00148500892078759 0.0025228273066603 0.000445394945922095 0.00173946599446973 0.00190714901726099 0.00191356640303569 4.45566604065343e-05 4.51288635742698e-06 0 0.000395907767073781 0.000514810118653775 0.000552297779566621 2.1330445297728e-09 0 0 0.0054482793856798 0.00404852241940888 0.00200604338971063 8.30067193589857e-06 0 0 0.00221318117203607 0.0023001330976126 0.00215708484257777 7.58745802100282e-10 0 2.82536423255895e-05 XR_229992.1 LOC101908939 PREDICTED: Bos taurus kelch repeat and BTB domain-containing protein 11-like (LOC101908939), misc_RNA. 2e-112 412 92.14 0.0597582811101164 0 noncoding ACAAGAAAAAAAATGAGGCCTGGAGGGCATATATAATTGCATGAAGTTATTTTTATGAAAGATGAAAGTAGGTTTCAAACCTATTTTTGTCCGACTTCATGCGTTCCCCTGGATCTTTCTACATCTTAAAGAAATTCTTTTTACCTCCGAATCAGTCATTGCCCAAACACCATATTTGGTACTCTTTAGGAGAAAGTTGTAGAGTAAAAAACGGTGGACTCATAATTCATACCATTTATTGAAAAAACTTCTAAATGCTGTTCAGAAGTGTACACAGCGCTATAAAAGACCTTGACATGTCCTCTTAGGTGGTTTGCCAACACTAATCCAAAATTCATTGTGCCTTGCATTTACAGTAGAGGTATATTAGCCATGCATCTGGATGAAGAAGCTTTTAAAGATATTTTAGTTGTACTTTATTCACATGAGAGAATTTTTTTTTAAGTGGTAAGATTTGTCTCTTGTCTTGTTTTACCCCGGCAAGTACATAGATCAATACCGCTTAGAATTTGTGGAGACAAATATAAATAAACCTCTAAGTCTAAATAAAACACCTCTTTAAGTAGATGTACCTATTTTCTTTGGATGGCTTCCAAAGAGCTCTTGGCAGCTTTTGTAATGCACAAGACCAAGAGGCTACTTGTGGGAAAGTCACTCACGGTCTTTCTAGAAGAAAATACTGAGAAACAGGAAAATGCTCATCATTACTTTTAATGGGGAAGCATGTAGATCCTTACTCTCCTTTACAAAGAGGGGATATCCTTCCCAGAAGTCTGAGAGAACACAGAAGTGGAATCTGGGGACACAAATATGAGGAAAGAAATGATCCAGTAATTTTGTTGCAGAGGTGAAAAGATGAGGAAGTAAGGCGGTGGACAGAGTAGTTCGTTCCAGAAATGGTGCTGATATTGCCACAGCATCAGTCACAACTTAGGCCTTATTTAAAAGATGTGCTTCCTTCCAACTCACTCTTTTCCTTCACGCTCCTACAGAAAGCTATCATTCTCTATCAAATGTTCTTTTCTACTTATTGGTGATTCTCTTCTCAAGAGTATCAAAAGTGACCTGAGAAGTCTTGTGAAAAGTAATAGCTTAATAATTCCCCATTCAAAAGCTCAGATTCATAAACCAAGAGGCAATTTGAATGTACATCATACATGTTAGCCTGTCCAAAATGGAGTTGGAAATCCCATTGAGAAAAAAGTTGTGTACAATTTTAAGTTATGGTGGATTTTGTAAAGCTACCTCAATAAAGGAATAATAAAGTAACTGCTATTTTCCGGCAATGGACATAGGGATTATGTGACACCCAACCTTCTCATTCAGCTGAGGGATCTTTTGCAGTTTCTTTGTCAGACTGTTTCAGAGTTTGCATCTGAAGACAGGCACTGACAAAACTACATTCTTTGTCTAAAGTAGTTGTAGGGTCTAAAAACAATGTCTGATGAGGCATTTTGAGAGAATTTGGGTTGAATTGTTTGGAAAAGACTAAAAGGGATTCTTATAATTGCCTTCAAATATTTAAAGAAATATAAGAAAAACAGAGGGATCAGACTCATTTATATTTAACTTTAGGGAGAAGCCAAAGATTCAAGCCAATGAATTTATCTGGGCGGTAAGGCAGACAATTCTCAAAGGATTAGAAGTGCTCCCAAATAGAACGGGTGGTGGTGTGAGCAGTGAATCCCTGTAGCTAGTGGTATCCACGCAAAGACTGGGTGGTCCTTCAAGAGCGAGGGTTACACTCAAATTTTACACAATCTCTTCCCTTAAAATGATTCTGTGATGATGTGAGTAGAGACAAACTAAAGATCATATATGACATGATTATCTATTACCCAGGTTTATTCAGTACCACTGAAATAGGGAAGGTAAACTACAGAGCATATCACTCAATCTAGTTCATATGAAATGACTTAGAAAAATAAGCTATAATTTTAAATCTGTAAATGACTAGTTTATGCCCAACTGTTAATAATCTGCCTCTATTGACAACTACTCATTTTAGCTCTTAGATATACTGCACTATGCTGTAGTTGACAATGATTATATATAAATTCTCAGCACCAGGCACTTAGAGAATCTCTTTAGGAGTATCAAAATCACTTAAACACTCTCGTGAAAAGGAGCAATTTTAATCATTTTTCACCAATCAGTGATTGTTCACAGAACCGAGAGAATGGCTTGAATTTACCCAATGAATCTGAAAAGGTTCCTACAAAATTGAAGCAATTTAAGAATTTAACCTAGTTAGAATATCATAAAGGTTACTCGCTATTATAGAATATAGCAACATGGGTTTTTTTTAATTAAAAATTATTACTGAAAAATGCTCATCAATATTTGCTCGTCCAGCAAGTTGCAATCATTTTATAATAGTGACATCAAAGACCACTGATCACCACAACAGACACCATCATAGTGAAAAGCTTGAAATATTGTGAGACTTACCAAAATTCTCAGAGACAGGACATTAACAAAAACGGTGCTGACAGACTTGCTCCGTGCAGGCTTGCCACAAACGTTCAATTTGTAAATAATGCCCTCTCTCTGAAGCACCATAAAGCAAAGCACAATAAAACAAGGTATGCCTGTAATTAAAGCCCCACATGCTTTGCTGGTTTTGTGTCTTACACTTGTGTTCATATTTAAAACAAAATTCTGTTTTTGTCAAACAGATCCCAATAGACAACCAGCTTTGCTTTTGGGAAGTTTTTTTTTCCCCCTTGGTGAATATCTCTTCACAAGCAAGGGCACCAAGTAGCTTGGTGAAATTCTTTAAAATACATCAGAGAGAATTTGCAAGCACATATTGTGAATTGACCCCTTCTGGCATTCATGGTGTTTCTGCTTATCAGTATCAAAACATTATTATCCTACACACACTGAATGATTCCTCAACATTGATGAAACTCTACCACAGAATATCATCGTGGAACTTTGTTGATCACTGAGCACATTTTATTACTTATTATTTTACATTATCTCTACTGGGTTTTCTTCTCTCTGTAAAGAGGCTTTGGTTTTCACTAGCTCTTTAAAAACCACCACTATCAAGCCCACTTATATTGATCGTCCTTGGCCACAGCTGCCCTCTCTCTCCACCATGCCTTCAATAGACTTCATTGCAGTGAGCAGTGCATCAGAACCACGTGGAGGGCTGGTCGAATCACAGGCTGCAGGCACCACCCCCAGTTTCTGATTGGTAAGTTTGGAGCAGGGCCGAGAATTTACAAGTCCTAACACGTGGAGGTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCACAGAGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCTTTGGACAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGCTGCCGTCTATGGGGTCCCACAGAGTTGGACACGACTGATGTGACTTAGCAGCAGCAGCAGCAACACGTTCCCAGGTGATGCTGATAGGGCTGATCCAAGAACTCTGAGACTCAGGGCTCTACCAGCCGTGCCTCGTGCCTCGTACTGCTTGTCAGTTTTCACAGCTAGAGCCATTTAACTCACACGTGTTGATTGTGCCTCGTGCACATAGGAAGGAATACACGCTCTTCATTGGGTCAGTATGATGTAAGGCTACAGCAGATTTGATGTGGGCAGTAAAGCTGAGCCTTTAACTGAGTTTTCCAGCTCCCTTACTTCATTCCTTCCTGGCTTCCTTCCTGGACAGACTACTTTTTCTGGGACTAGGACACTTTGATTTCCCTCAGCCAATTCCTTCTGGAAGCTGAAGATCAGCAGGTAAGTGCATTTCCCATATCTGGGAATCTACCTGCTTGCCTTCTGGACATTCGTGACCCTGTGCTTGCTCTGGCGTTTTTGGTTTGCCTGCACTGATTTCTTTTCATTGCTTGTTGTTGAGACTTTGAAGTTTGCCTTTTCTGTGCCAGTAAGTCAGGTGTCCTGGAGGTAGCATTCCTGGTCCTGATTTTGAATACCTCAGGCTGCCTTCTTTGCTTTTCAGGTGTGGCATTCGATTGAACAATGTCGTTTCTCTTTCAGTCACTGGTGCCTAGTCCTTCCCTCTCTTGATTTCTCATTGTGCTTCCAGTCCTCTCAACCCCAGGCTCCATCTCCCGCACATTCTTAGCTCTGAGAATCAGTGCTGGCTTGGTCTTTTACCTCTATGAATAATTGCTTTTCTGGTAAGATCATGTGACTTGGCTGGAAGGTTTATGGACACCTACATGCATGGCTTAGATTCTGGTAAGTCAGTTGTATTATTTCCTTTTTCAACCTGCATCAAGGAGGTCTATGGGCTTCTGCAAAGTGTAGTCTGAGAATCAGTAGCTTTCAGCCTGTTAGGGGTGCTTGTTATAAATGCAGAGCCTCAGGC TCONS_00236872 TCONS_00236873 TCONS_00236874 TCONS_00236875 r 5' 10777 TCONS_00236872 TCONS_00236873 TCONS_00236874 TCONS_00236875 r 5' 10777 EMBV3_17657 ACCCCAGAGAGCAATGACGAGAGAAGTTCCAACAGGAAGAAGAATTCCAGGAATAAGGCC Gene BVV0102_245572 + 0 NULL GK000009.2:13380728-13421248 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11149 ACTGAAGAAAATATTGACAGAATATGTCAGCCATTAACAGACCAGATATCACAGACACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38856 GGGGGTGAGAAAAATGAGAGCAGGTTTCCCCCAAAACATAGGCTCGGCACAGGGACAAAA Gene GeneID:404104|DMBT1:XM_002698552:14_cdna Constitutive 0 NULL GeneID:404104 26 GENE DMBT1 MUCIN deleted in malignant brain tumors 1 EMBV3_23073 TCGAGATCGAGTCGCGCCTGGGGGGCACAGCTCATTGAGGCCATTCGAAGAGCCAGTAAC Variant GeneID:505710|C19H17orf37:NM_001075221:76_cdna 198^274 1 EMBV3_06632 GeneID:505710 19 GENE C19H17orf37 C17orf37 MGC142432 chromosome 17 open reading frame 37 ortholog EMBV3_05488 TTCATTGCTAGATGGCAGGGACCTGGAGTCAGGATTAAGGCCAAGTTATCTCCCCAGGCT Gene BVT0102_059484 - 0 NULL GK000019.2:5839775-5959720 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094956 1 XLOC_057606 Coding TCONS_00094956 XLOC_057606 NonCoding Coding - 19:5844297-5847336 - TSS70933 3039 1 TCONS_00094956_4 83 0.0546232313260941 1 0 0 3.75906565554972e-222 0 0 0 0 6.18197230771553e-220 0 0 0.000476794476002078 6.22128411608619e-05 0.000481981207471052 8.52977492366319e-06 0.000105151320231195 0.000136451469472026 0.000392070833844289 0 8.14792672787264e-115 0 0 0 7.60002768437105e-06 2.91799034256248e-05 7.15074130232055e-05 0 0 0 3.51400419470249e-05 0.000349409366815837 1.33931546194439e-05 0 noncoding 0 0 0 0 0.194609359042661 0.174453535234045 0.122074558465859 0.067581583797148 CCGGATCTTCCGACCCCGGATCATCCTACCCCAGCCTTGGCCTGCATCCCTAACCGGCCTTGGGGGGCCCCCGAGGCGCCCGGACCCGAGCCACGTTGCCCCGCAGGGGTGCTGGGGGTTTCCGGCGCTTGTCTTTGAACTGCCGTGGCGGTGGGGAAAACTGAGGCAGGCTCCGCCGGTTTAGCCTTGCCTGCGGGGTTCTCGGGCTTAGAGCCCCAGCGTGTGCTATTTTGGGTCACCGCGCCGGGGCATTAGCTTCTGGGCGGTAAGACCTGCAGTTGAGACGCCTGGGTTAGGAAACGAGGAACCGAGGAGGCCCCCCGGAAGGATGGCCGGGTGCTCTTTGGCTGGAAAGCCGGTGGGAACGCCAGCCTGGGGAGATAACTTGGCCTTAATCCTGACTCCAGGTCCCTGCCATCTAGCAATGAATGGAGGCTGGCCATAATTCGAGAGGAAGCTCTGCGCTTTTTTTTTTTTTTTTTTTCCCCTAATGCTCCTTCGTGTAAGTGGGTGAAAGTTCACGTGTCGTGTGTTTGTGGTAACTCTCCATCCCTTTGTCTGAATCAGGCTAGCATCCCCACTCCCAGGCCTTCACCCTGAGCAGGCTAGCTTAGTGTGCAGTAGAATTTGGAAAAAAAAAAAAAAAAATGCATGAAATCTCTTAAGGCTTTTGTTGCGTTTTTAGGCATTGCTTTTTATTACAGGATTTTGAAGTATGGGTTTTTTTTTGTTTTGTTTTTCTTTCCAATGCTTTAATCCCTAGAAACCCTCTCACCTCTTCTGCTGGTCTCATTTCTTCTCCAGAGTGACATTTGCACAGGGAGAGTTGGAGTGATCAGGATGAAGACTTGGATTAACTTTTGAACATTGCTTATCACTCAGTGTGGTGAATGCCTGGCAATGTTCGCCTAATGGGAACATCATATCAGTTCTTCCAAAGACAAAAGGGAACCATGATGTTCTGTCTTTAGAACATGAAGTCAGCCATGAGGACTGGAGGGGCTTCAAGGGAGGATGTAACACAGGCTCAGCAATGGTTGGCAAAACCCTGTATGTGGTGTGTTTAATTTGGTTTTACTTCTCTGCACATCTGTGCTCTTCCTGTTTTCCGGGAACCGTGGCAGTCTTCTGTGCATTTACCGGTTTTTGTTAGATTAAAGAGTTCTATTTCTTTTCTATCCTTTCAGTTCTTCTCTCGAAAAAGAAAGAAAAAAAAGAAACTTGTGTTATTGTTTGTTGCACAAACATTAGCAGTATTAAGAGAAATGAAAAACAAACACATCTTTATTTAAGATCCTACCATCTCAGCTGATTGAACTCTTCTTGTTTGCTGGACACTAATCTATGCAGTCCTTATTATCACAGTTGTAATGTGATTTTGCCCTCTATTCCATTCATTTAAAAATTAAAAATACAGGCATTTTCTTTTGGTATAGCATAGACGTTGTAATTTCCGCAGCAACTGCACAATGTCAGTGGATATTTAACAGTTATTTTCTTGATGACATCTAGACCTGCCCTGATTTTCTTTGCAGAATGAATGATCCCGTAATTTCTTGTTTGCAAAGATATTTCTATAAATCAACTTGAACTTAGAAATAAAGTCTGCAAATAAGTAATATATTGTGGTCTATACATTAACATATTGAGAGTACTGTTCTGCACCTCTTAAAAGCTGTTTGTTATCCATCTTGTGAGCATTTAGGATAGTTACAGGTTGTAAATGACAGAGGAACTAGAAAGAGGAACACACTTATCTTTAAGCCCTTGTATTCCTTTTGATAGATTCACCAGGACTCCATTGAAGAGCATTTGACTGCAGTAAAAACATTTCATTAGGCCATCCTTTGTGGCTATGTCTAACTTATAAGAAAACTTGAACACCCTGCTGGTTTGTTCATAATGGAAACTTGGCGGTCACTGTGGCTTTGGATCAACTTCCAGAGCTCTGCCATATGTGGAGAAGAGCTATAAGGACGCCTAACCCAGTGTAGTAAGTGGAGGGCTTTATGCAGGCATGGCTTCTCAAAAATCTTAGGATGTGAAAAATCCCACTGGGACACCTTTTATCTTTTGTGCTGTATCCCTTTCGCTCTTGATTCTACCCCCACACTGCACAGAGTCATTCTCTCCCTTTCACAGCATCTCTGACTGATTAGAATACTTGCTAACATTTATTGAGTGCCTATCAGTGCCAGGCAGTAGCTGGGTATTTGTAGGTAACTCATCTCATCCCTAACTGTAACCCTGAAAGGCAAACTTCTACCCATTTAATAGAAGAGCTTTAGAGAATAAAAGAGCCTGCTATCATCACACAGCTAGAACGGGGCAGACAGAAGGGTTCATGTCCCTTTCCACCACCCATGCAGCCATTTACCTCTGTCTCCCCACCCACACACAACATCTGTGTGATAGTGCAGAGGCCTAGGACCCAGAGCTTCTAAAGTGTCCTGTTGGTGTGTGCTCATTTCTCCAGCCTGGCAACCAGAAATCCAAGGAAAAGGATACTGCTTTCTTAGCTCCAGCCTTGTGACCACTGGTTAGTTTCAAATTGAGTATGTGGTAAGGCGTCTTATTCTAAAGCATTAGGAAGTGTTCCAGTGCTGCCTGTTGCCTCTCTTTTTGTTCCATGTTCTCAGAGCATCGAATCATACACCGTTCAGTGAACACTGAAGAACACTGAAGTTGTTTCCTTATATGTGCCATTTCCCTTATTTAGTAATTAAGTTAAATGGCTGCCACCACTATCGCCACCTCTGACTGCAGGCACTTTCTCCTAAACATCATGCTTATTCATACAGGACAGCTAATATCAATAGTAGGGTTCTATGTAGGGATCAGTTCTGTTGCCCCTTCGAATGATGTTGAAGGAGCCCCTGAAATGTTCATGGTCTTGTCCTTTGTCCATTTTGTTTTCACAAGATCGAGGATTCTCTTGGCTCTAAGACTGCCTGTTTTTGTTGCATACAGAAATCCCCAGTGAAACTAACTGCCGGCAGGATCTCTCTCAGTTAGGATAATAAAATGCTTCAGCAGCAG TCONS_00094953 s 5' 0 TCONS_00094953 s 5' 0 EMBV3_33359 ACTCTCCTGTGAGCAAAAGCAGAGACTGTGGCCCTCCTGAGACTCCAACTCATGGCTATT Gene GeneID:281652|C4BPB:NM_174253:16_cdna Constitutive 0 NULL GeneID:281652 16 GENE C4BPB NULL complement component 4 binding protein, beta EMBV3_01108 GGGTACTGATGATATCAATATGGAAGTCGAAGGTAAGGAGTTGTTCAGGAAAATACTAGC Gene BVT0102_124307 + 0 NULL GK000016.2:34785758-34982792 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067088 TCONS_00067089 TCONS_00067085 TCONS_00067074 TCONS_00067073 TCONS_00067086 TCONS_00067079 TCONS_00067071 TCONS_00067087 TCONS_00067076 TCONS_00067082 TCONS_00067084 TCONS_00067090 TCONS_00067077 TCONS_00067081 TCONS_00067069 TCONS_00067091 TCONS_00067075 TCONS_00067078 TCONS_00067072 TCONS_00067092 TCONS_00067083 TCONS_00067070 1 XLOC_041350 Coding TCONS_00067081 XLOC_041350 Coding Coding CEP170 16:34656413-34787538 = TSS50526 6963 1 TCONS_00067081_5 1553 22 0.947065373234496 0.0040426776475901 0.00255947544616336 0.0030106715543567 0.000969284603512524 0.000537098115825336 0.000642685920133071 0.00158556553835021 0.00136798434585284 0.00208349587200917 4.31114453403212e-08 1.08665106073337e-17 4.62292834635592e-05 4.66621977586273e-12 2.76143315419754e-05 7.05336511267123e-11 0.00168672934066313 8.22319733151631e-13 2.04018520721116e-15 0.00326412029362917 0.00349377585796944 0.00203293332845014 3.56688914291441e-27 4.94889149437189e-09 7.04069335379416e-11 0.00164736017451593 0.00664351289858431 0.00270300730436714 2.33739759635228e-12 4.12082424596537e-05 5.80740044731417e-09 NM_001035377.2 CEP170 Bos taurus centrosomal protein 170kDa (CEP170), mRNA. 0.0 1.118e+04 99.84 0.894011202068074 NM_014812.2 CEP170 Homo sapiens centrosomal protein 170kDa (CEP170), transcript 0.0 8545 90.61 0.892000574465029 TCONS_00067081_5 sp|Q5SW79|CE170_HUMAN CE170_HUMAN Centrosomal protein of 170 kDa; 0.0 2800 91.29 0.99935608499678 2 coding 1 1 1 1 1.6392188594758 0.0282597216223916 0.0190475350375834 0.700764453523758 TCCTTGCCGTTACCGCTATGTGCGGAGCGTGTGTGGAATAACGTTATTGCCCAGCAGCGCCAAGGGGCCCAGAGCTCGACCGCGGCGGCGGCGGCTACGACGACAGGGTGGGGGAGGACGCTTGCGAAAGACTCACGGGACGCGGCGCGCCCCGCCCCCCCGTCCGGTCCCTCTCAGCAGTGAGGGGATGACGTAGCTTTCCCAAAGACTTAGAAGCTAAACAGAAAATGAGCTTAACATCCTGGTTTTTGGTGAGCAGTGGAGGCACTCGCCACAGGCTGCCACGAGAAATGATTTTTGTTGGAAGAGATGACTGTGAGCTCATGTTGCAGTCTCGTAGTGTGGATAAGCAACATGCTGTAATCAATTATGATGCCTCTACTGATGAACATTTGGTGAAAGATTTAGGCAGTCTAAATGGGACTTTTGTGAATGATGTTAGAATTCCAGAACAGACTTATATCACCTTGAAACTTGAAGATAAGTTGAGATTTGGATATGATACAAATCTTTTCACTGTAGTACGAGGAGAAATGAGGGTCCCTGAAGAAGCTCTTAAGCATGAGAAATTTACCATTCAGCTTCAGTTGTCCCAAAAATCTTCAGAATCAGAATTATCAAAATCTGCATGTGCCAAAAGCATAGATTCAAAGGTAGCAGATTCTGCAACAGAAGTGCAGCACAAACCTACAGAAGCACTAAAATCTGAGGAGAAAGTTGTTGGTACTTCTCCCATGGAAGAAAGAGAAAGTGGAACATTAGGGTGCAGCATAGATGCCAAGCAAGTTGAAGAACAATCTGCAGCTGCAAGTGAAGAAGTACTTTTTCCTTTCTGTAGGGAACCAAGTTATTTTGAAATCCCTACAAAAGAATTTCAGCAACCATCACAAATAACAGAGAGCACTATTCATGAAATCCCAACAAAAGACACACCAAGTTCTCATACAACAGGTGCAGGGCATGCTTCATTTACCATTGAATTTGATGACAGTACCCCAGGGAAAGTAACTATTAGAGATCATGTGACAAAATTTACTTCTGATCAGCGCCACAAGTCAAAGAAGTCTTCTCCTGGAACTCAAGACCTGCCGGGGATTCAAACTGGAATGATGGCACCCGAAAACAAAGTAGCTGACTGGCTAGCACAGAACAACCCTCCTCAGATGGTATGGGAAAGAACAGAAGAGGATTCCAAAAGTATTAAAAGTGATGTTCCAGTTTACTTGAAAAGGTTGAAAGGAAACAAACATGATGATGGTACACAAAGCGACTCAGAAAATGCTGGGGCTCACAGGCGCTGTAGCAAGCGTGCAACTCTTGAGGAACACTTAAGGCGCCACCATTCAGAACAGAAAAAACTACAGAAGGCCCAGGCTACTGAAAAGCATCAAGACCAAGCTGTTACTAGCTCTGCGCACCACAGAGGGGGGCATGGTGTTCCACATGGGAAATTGTTAAAACAGAAATCAGAGGAGCCATCGGTGTCAATTCCCTTCCTACAAACTGCATTATTAAGAAGTTCAGGGAGTCTTGGGCACAGACCAAGCCAGGAGATGGATAAAATGTTAAAAAATCAAGCTACTTCCGCTGCTTCTGAAAAGGATAATGATGATGACCAAAGTGACAAGGGTACTTACACCATTGAGTTAGAGAATCCCAACAGTGAGGAAGTGGAAGCAAGAAAAATGATTGACAAGGTATTTGGAGTAGATGACAATCAAGATTATAATAGGCCTATTATCAATGAAAAACATAAAGATCTGGTAAAAGATTGGGCTCTCAGTTCTGCTGCAGTAGTAATGGAAGAAAGAAAACCACTGAGTACACCTGGATTTCACAACTCAGAGGAAGGTACATCTTCGTCTGGAAACAAGCGTTGGGTTTCACAATGGGCTAGTTTGGCTGCCAATCATACGAGGCATGATCAAGAAGAAAGAATAATGGAGTTGTCTGTACCTGTTCCTTTAGAGCATGATACAGATATCAGTGAATCTGGCATTTCACTGAGAAGTACTGGCTCAGCAGCTTCCTTGGCTAGTCAGGGAGAGAGAAGGAGACGAACCCTTCCCCAGCTTCCAAGTGAAGAAAAGTCTCTTGAGAGCTCCAGAGCAAAGGTTTTAGCACAGAGGTCAGAGATAGGAGAAAAGCAAGACACGGAGCTTCAGGAGAAAGAAGCACCTGCCCAGGTATACCAGAAAGATAAGCAAGACACTGACAGAGCCTTGAGTAAAATAAACAGGGCGGTAAATGGTGAGACTCTTAAAAATGGTGGAGATAGCAAAACCCTGCTTCACTTAGGCAGCTCTTACTCTGGAAAGGAGAAAAGTGAAACTGATAAGGAAACTTCTTTGGTAAAGCAAACATTAGCTAAAATCCAGCAACAAGAACAAAAGGAACAGGCACAGTGGACACCTACTAAATTATCTTCTTCAAAAAACATTGCAGGTCAGATAGATAGATGTAGGGAGGAGTCTTTTAAGCAGGAGTCACAGCCTCAAGAAAAAATTCCAGGACTTTCTGCAGGCAAAGGAGAAAGAGCAGTACAAAACGAGGGTAAGAGAAGAAAAGCTGAGGAAATTCTGAAAAGTCAGACTTCAAAGGGAGGAGACAAGAAGGAATCTTCCAAGTCATTAGTGCGACAAGGAAGCTTCACTATAGAAAAACCTAGCCCCAACATACCCATAGAACTTATCCCCCATATAAATAAACAGCCTTCATCAACACCCCCTTCCTTAGCATTAACAACAGCCAGCAGAATAAGAGAAAGAAGTGATTCCATGGATACTGATTCTAGTATGGACACAACCCTTATTCTAAAAGACACAGAAGCAGTAATGGCTTTTCTAGAAGCTAAACTGCGTGAAGATACTAAAACTGACGAAGGCCCAGATACTCCCAGTTATAACAGAGACAACTCCATTTCACCCGAATCTGATGTGGACACAGCTAGTACCATCAGTCTGGTTACTGGAGAGACTGAAAGAAAGTCAACCCAAAAGCGAAAGAGTTTCACTAGTCTCTATAAAGATAGGTGTTCCACAGGTTCTCCTTCCAAAGATGTTGCAAAATCATCATCTTCGGGTGCTAGGGAGAAAATTGAAAAAAAAACAAAAAGTCGTTCCGCAGATATAGGTTCTCGGGCAGAGGGTCGTAAATTTGTGCAGTCCAGTGGAAGAATAAGGCAGCCTTCAGTAGATTTAACAGATGATGACCAGACCTCTAGTGTACCTCACTCGGCCATCTCTGATGTTATGTCATCTGACCAGGAAACTTACTCTTGTAAATCTCATGGAAGGACTCCATTTACCTCAACTGATGAGCATGCACATTCCAAACTGGAAGGAAGTAAAGTAACTAAATCCAAGACTTCTCCCGGAGCACCTGGCTCATCCAGTAAATCCACCACTCTGCCAAGGCCACGACCTACCAGGACTTCCCTCTTGCGTAGAGCCCGACTTGGTGAAGCTTCAGACAGTGAACTTGCTGATGCTGACAAAGCATCTGTTGCTTCTGAAGTGTCCACAACAAGTTCGACATCCAAACCTCCCACAGGAAGGCGTAACATTTCTAGGATTGACTTGTTGGCTCAGCCTCGTAGAACAAGGCTTGGCTCATTATCGGCTCGCAGTGACTCTGAAGCGACGATCTCTAGAAGTAGTGCCTCTTCACGGACCGCAGAAGCCATCATTAGAAGTGGAGCCAGATTAGTACCTTCAGATAAATTTTCTCCTAGAATTAGAGCTAACAGTATCTCTCGACTATCCGACTCCAAGGTCAAAAGTATGACCTCAGCACATGGCTCTCCTTCAGTAAATTCAAGATGGAGGCGCTTTCCTACTGATTATGCTTCCACCTCAGAAGATGAATTTGGATCAAACCGTAATTCCCCTAAACATACCCGTCTACGTACTTCTCCAGCCCTGAAAACGACTCGATTGCAGAGCTCTGGGTCAGCAATGCCTACTAGTTCTTCATTCAAACACCGGATAAAAGAGCAGGAAGACTACATCCGAGATTGGACTGCCCATCGAGAAGAAATAGCCAGGATCAGCCAAGATCTCGCTCTCATTGCTCGGGAAATCAACGATGTAGCAGGAGAGATAGATTCAGTGACCTCCTCGGGCACTGCCCCTAGTACCACAGTAAGCACTGCTGCCACCACCCCCGGCTCTGCCATAGACACTAGAGAAGAGTTAGTTGATCGTGTTTTTGATGAAAGCCTCAACTTCCGAAAGATCCCTCCATTAGTTCATTCTAAAACACCAGAAGGAAACAACTGTCGGTCTAGTGACCCAAGACCTCAACCAGCAGAGCCTCCTGATCACTTAACAATTACAAGGCGGAGAACCTGGAGCAGGGATGAAGTCATGGGAGATAATCTGTTGCTCTCGTCCGTCTTTCAGTTCTCTAAGAAGATAAGACAGTCTATAGATAAAACAGCTGGAAAGATCAGAATATTATTTAAAGACAAAGATCGGAATTGGGATGAAATAGAAAGCAAGTTAAGAGCTGAAAGTGAAGTCCCTATTGTGAAAACCTCAAGCATGGAGATTTCTTCTATCTTACAGGAGCTAAAAAGAGTTGAAAAGCAGCTACAAGCTATCAATGCTATGATTGACCCAGATGGAACTTTGGAGGCTCTGAACAACATGGGATTTCCCAGTGCTATCTTGCCGTCTCCACCAAAACAGAAGTCCAGTCCTGTGAATGACCACAGCAGCCCGGGTCAGACACCGACACTTTGCCAACCAGAAGCTAGGGTTCTTCATCCTGCTGCTGGTGCGGTCTCAGCTGAATTTGAGAATGCCGAGTCTGAGGCTGATTTCAGTATACATTTCAATAGGTTCAACCCCGATGGGGAAGAGGAGGACGTTACAGTACAGGAATGACTTTCTCTTGCTTGTTAAAATAATTACCTGTGGAATGACTAGAATTATTGGAAACAGCGTAGTGTTGACTTTTAGAGAAAATAAGACAGCTTGGTCAACTGCAATCTTGTTATCTCTGTCTTCTTAATTTTATTTATTTATTTTTTATCTATAACGTGGAGCCATAGTAATCCTTTTGAACTATTGAGATGACCATTTGATGCACAAAGAGGAAAAATTAGATTGTGAAACTTTCACATTTTGTGGTTTTATGATTTTCAAATTGAATTAGATAATTGCATCCTTTCCCTTCATAGATCTTTGTTTTTTTTTTTTTTTTTTCTTTAAGCCATGCTGTGACCTACAAGCAAACTAAATACCCAACCTTTCTGACCCCCCATGTCTCCTGTGCCAAGCTGCTCCCTGAAATGGACTTGCTCTTCGTCTGTACAGATTTGTTAAACACTTATATTTGCTTCTTAATAATAGGATTTATATTAGTATTCATTACCATTGGATACAATGACATATTGCTCTCCACAGTCAAACTGACCTTTCAGAACAGTCCTTCTTGTGTTCTAAAATTTTCCAACATATATGTGATTTATATAACTTTGTTGCTGCGTAAATTGTCTTAGGGTTTATGGAAATGAACTATTATGTTTGCACTAAGATTTGCTGGGAGTGGTAGGTGGACATATCTATATATCAATAAGGACTAACCATCGTTTTTTGTATATAGGAGATTGATAATTGTATTTGTTTTAACCCCACAGTGTTTTACTCCACTTTCAAAAAGATCAATTTGGCACTTTTTTCCCTTTTTTTTTTTTTTAGTGAAAGTAAGATTTTGTCTCATTTTAGGGCAAATGATAAGTAGAAGGATTAAACTAGACAGATAGGTTATAGGTGGAGTCTATTTTTAAAACTAAGAACATGTATACAGGTCCTGTGTTACCAAGTTTATATGTGACAGTTGAAAAAATTTTTCCCTTGAAATGATCATGAGATTAAAATTTGGGGCATTAGGAAACTTGGAGAACTAGTAGTCATAAGATTAGTAGATATTTCACTCCCAAGCAATGAATTGCTTCTGTGTGTTTCCCTGTAGGACCCAATAGTAAATCCTGTCTCAGTCGTATACATTTATAAGGACCCTACAAGATGACGACCAAGGCTTTGTGCCTATGCTAAACAGGAAGCTTATGAAAAGTATCTTCTATTAACTTGTTTTTTTCTCTTTTCAGTAAGTTCACATTTGGATAAGTTTCAAAAGAAAGTAATTATCTTTATGTTTCCAGAACACTATAATTTTGGGTAATTCTTAATTCAGTTAAATATTATTAGTAGACCTGGATTTTTGAAACCCGTGATCCCATCAGTTTATAAAGGTTAAAGCTACAACTTTTGCAACTTTCATGAAATAGTCTTTAATATTTCAGCAATAATCCTGTGCTACATTTGTTTTAAGAAAGTAACTCTGTTCAATTCAAATGTTTACAGGATTTTTAAAAATCCTGTACTGTTGGGCCAGTTAATAAAGATGCAAAAAAAACAAACCACCTGTTTTTAGAGACATAGAAACAAAAGTCTGTTGTATAATGGATCTCATTATTTTTCTTTAAATTAAAAAAAAAAGAGCAAATGAACTGTTCTCCTTGTAAAGCTAAATTCCCCATTCTGTCTAATAAAGGAAGACTGAAAAAAATGGTTTTAAAGAGCATGAATGAAAAGATACAGTTGCTTTGAAGGAATAAATGAAATGTTAAAACAGGGTTGATCCATTTGAAGAAAGAGTAGAAAAAATTAATCACCACTGTTTCATCTTTGTTTAATGTTTGGGTACTGATGATATCAATATGGAAGTCGAAGGTAAGGAGTTGTTCAGGAAAATACTAGCATCTATTCTACTTACATTATCATTTAAGTGTTTACACAGTTTTGTTCAATTACAAACATTTGGCCTTTTACTATGTTATTTTTATTTTGTATGAATACATTATTCTCCTTATTTATTTTTGTTACCTTTATTACTTATGTTATTTTGTTATGCATTTACAACTCCATTTTTAAATAAAGTGTTTCTGGAACTTTA EMBV3_23808 GGTGGGTTCCTGCATGACCGACCTGGTCAGAATTTACATATCAGACTAAAGATGCTGCGA Variant GeneID:513276|RBKS:XM_002691453:286_cdna 99^295 2 EMBV3_33712 GeneID:513276 11 GENE RBKS NULL ribokinase EMBV3_15879 CTTGCCACAACTAGAGAAAGCCCGTGCACAGCAATGAAGACCCAGTGCAGCCAAAGACAA Gene GeneID:532898|TNS4:NM_001038155:160_cdna Constitutive 2 NULL GeneID:532898 19 GENE TNS4 MGC126986 tensin 4 EMBV3_07999 TGGAAACAGAGACATCCCCGCTCCTACAATGTTGGTTTATAAGTGGTTCCTGCTGATCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22555 CTTAGACCCATTCTAGGTCAGAGAGGGCAGGCTGAGGGGTTCACAGTTGGTCAATATCCA Gene BVT0102_140107 + 1 EMBV3_33229 GK000004.2:25161438-25213087 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181037 TCONS_00181038 TCONS_00181036 1 XLOC_110527 Coding TCONS_00181037 XLOC_110527 NonCoding Coding - 4:25163814-25167482 - TSS135619 807 1 TCONS_00181037_1 56 0.480793060718711 3 0.780747204799564 0.00177475851783122 0.00325465880117325 0.000416684093820344 5.34671170685321e-09 1.83769861829213e-06 0.000348029287970613 1.33252758561664e-15 4.25316759723276e-06 6.52833330965878e-06 0 0 0 2.12956696130231e-06 1.32139412896218e-13 1.57050594915877e-06 0 0 8.54136638057545e-06 0.000826389460079504 2.64872579915928e-06 1.2040577117727e-06 3.69969458441741e-06 7.4183706525235e-166 0 0.000201660127837896 4.44178744527769e-05 0.000228705181897284 3.13141262292034e-06 7.82031664824814e-05 3.75675992300313e-119 XR_237496.1 LOC101903614 PREDICTED: Bos taurus uncharacterized LOC101903614 (LOC101903614), 4e-18 96.9 71.18 0.280049566294919 NM_207359.2 GADL1 Homo sapiens glutamate decarboxylase-like 1 (GADL1), mRNA. 4e-11 73.4 76.07 0.14002478314746 0 noncoding 1 1 1 1 -0.0911217619058324 0.593806344592133 0.00842515874501588 0.857553628774691 CTGGTAACTGATGAGCACACCTGATGTCAGTTCCCTTGTAACTGGTAACCTCCCTTTGCCCCTGCTACCAAAGACTGCACGTCTTGCCCTGGTGTCTTTGCTGCTGTCTATCGACTTGATGGGGTGTTGCTCCAGGATCCTGCTTCAGATAAATAAGCTCCCCCATCCATTAAAACATTAATGTCCCTGTTGCTGCCTTAGAGCTCTTTCTTCAGTCTTGAGGCTGGGTGTGGCGCAAGGTCTGAGGACAACTTCTCAGTGATCCTTGAAACACCTGACACCAGTCAGGACCACACTGACAGCCACAGAGCCAGATGGTTACCAAAGTCCACTCCTGTGCAGCCATCTGCAGTCCGCTAGATCTTCAGTAAAGGAGTAGCAAAAATACTTTCTCATGAGGATTGTCTAACCAGGCTCTATCTGCACCAGTACATTGTGGATATTGACCAACTGTGAACCCCTCAGCCTGCCCTCTCTGACCTAGAATGGGTCTAAGAGAGGGAAGCTCTAACTGGACTTGATTACTGGTTTTCAAACTTTATCTGAAAACCATCTGGATCACATGGCAGAGTGAGAGTCGCTCAAAATCTCATGGAGGCCTTGTTAATTATGGGTCGTAAACAACAGCTCCAGAGTCTCTGACGCAGTACACCTGGGGTAAGACCTGAGGATTTGCATTTTCTAACAAGTTCCCAGGTCATGCTGTTCCTGCTGAACCCGTGACCACATGTTGAGAACCACTGGGCTAGCTAATCTGTAAACCCTTAGGAATAGGCATGTTGAAGCAACCCAACCTCACAGAATGGG TCONS_00181035 TCONS_00181035 s 5' 0 TCONS_00181035 TCONS_00181035 s 5' 0 EMBV3_07409 CAAGCGCGGCCCCCAGCGCCGGGAAAGCAGGAAGCATTCTTCGTGTTACTACTGCTGACC Variant GeneID:510957|MRPL19:NM_001046068:80_cdna 246^364 1 EMBV3_12168 GeneID:510957 11 GENE MRPL19 MGC127718 mitochondrial ribosomal protein L19 EMBV3_43165 CAGTGGGTGCCCACCCTGCCCAACAGCTCGCCAGCCCGAGGTGCTGGTCCCCATCCGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05672 AGCTGCGAGCTGTCTTCTCTCTTCCCTCTGTCTTGCTCTGATACCTCCACCAATTTCATG Gene GeneID:617388|LOC617388:XM_002687339:8_cdna Constitutive 0 NULL GeneID:617388 5 GENE LOC617388 NULL similar to olfactory receptor Olr1105 EMBV3_13148 GAAGAGGGACAAAACTGAAGAAACAAACCAGAAGGATCCAGTACCCACTAGGCTTCCCCC Gene GeneID:100295688|LOC100295688:XM_002687291:194_cdna Constitutive 0 NULL GeneID:100295688 5 GENE LOC100295688 NULL hypothetical protein LOC100295688 EMBV3_36810 CTTTTATCTTTTGTCATGAACTGCTTGATTATTGGGGCTCTGAGGTACCATGACGCCTGC Gene GeneID:615658|CAMLG:NM_001037625:46_cdna Constitutive 1 NULL GeneID:615658 7 GENE CAMLG MGC133772 calcium modulating ligand EMBV3_28109 CCACCTTTGATGACTGGAAAAATATTCGAGGACCCAGGCCTTGGGAAGATCCTGATCTCC Gene GeneID:615979|COX16:NM_001046568:214_cdna Constitutive 0 NULL GeneID:615979 10 GENE COX16 C10H14ORF112 MGC137677 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) EMBV3_16996 TGTCACCCCAGAGCACCAAGCAGAGTTCCCTGAGCTACACAAGATGTAATTTTTGCCCTG Gene GeneID:100300048|LOC100300048:XM_002697993:77_cdna Constitutive 0 NULL GeneID:100300048 25 GENE LOC100300048 NULL hypothetical protein LOC100300048 EMBV3_28576 CCGCTCAAGGGATGAGTCGAGAGGAGTATGAGGAGTACCAGAAGCAGATCATCGAGGAAA Gene GeneID:616684|CPLX4:XM_002697778:343_cdna Constitutive 0 NULL GeneID:616684 24 GENE CPLX4 NULL complexin 4 EMBV3_23172 GCAGAAGGGCACTTGTGCAGTGATCTGGAGAGCATGCAAATGGATGCTATTGTTTTGATA Gene BVT0102_068485 + 0 NULL GK000014.2:60454112-60993118 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00057060 1 XLOC_034861 NonCoding TCONS_00057060 XLOC_034861 NonCoding NonCoding - 14:60604263-60605206 - TSS42737 943 3 TCONS_00057060_1 57 0.131495227995758 1 0 0 0 0 0 0 0 0 0 4.18353554577368e-05 0 0 0 0 0 0 0 0 0 0.000281361330737183 6.86350664443386e-05 0 0 0 0 0 0 0 0 0 0 XR_229229.1 LOC101902829 PREDICTED: Bos taurus uncharacterized LOC101902829 (LOC101902829), 7e-09 66.2 88.68 0.0540827147401909 NM_172015.3 Iars Mus musculus isoleucine-tRNA synthetase (Iars), mRNA. 3e-07 60.8 85.48 0.063626723223754 0 noncoding 0 0 0 0 0.139056602159919 0.399745168952458 0.00329026403053392 0.944858085189547 AGAACAACCTCGAGTAATCGCAACCAGAAAATGCTATCAACATTTCAGCACAAAGAATATGCAAGAAATACTTCAGAAGTGGGAGCTGAAAATACGAAAAGAAACATGGCTTAATATTTACTTTGATTCTAAGAATAAACGACTTACACATTTGTGTAAGTGTTCTATTTTATTTTGCTGTCATCTTGTTTACAACAGCTACCCCCTTCCTGTCCCCGAATTCTACTCCTGATCCTGGATCCTCAACTCATTCCTCAGCAGCAAATCACTCCTGACCTCCCCTCATCTTGTCACCAACATGTCCACTCCCAGCACTACCCTGTCATTCATTTGTCCTCAAATATTTGAGGACCCATCATGTACCAGACCCTGCCTAGTGATGGCTTACAGCAGGGAACAAGTCCAGACCATCCTGGAACTTCAAGGTTAGTATCAGAGACATAGACATTTCATGAGTAACTATTAAGTTTAATTCTATGAAATTAAAAGGGAAAAGTACAACATGGCATGAGAGTGAATAATACAGAGGCCTAATCTTATTCTGGTGGTAGTTTATTCATTCTTGCCCTTTTTGTTAAAGATGGTAATGGTCATACTAATGACCAGTGACAGCCAAGATAAATATGAGACTTTGTGTAATAAGTAGAGACAGTTTCATGCTATAAAATGAATGATATTGTTGTAAATCCTTACACTGTTTTTGTTAGTGATATTAAAATATTTGGATTTTTATCTTTCAGTATTGCAGTATCAAAACAATAGCATCCATTTGCATGCTCTCCAGATCACTGCACAAGTGCCCTTCTGCATCTTCTCCATCTCTCTCGTCTCTGTCTGCTAGTCTGTCTCTCTCTTTCTCTGTCTCACACACACATACACATGCGCATTTTCCATTGTTGTTGTTGTTCAGTCGCCAGTCGTGTCCAACTCTTTGCAACTCCAT TCONS_00053607 . 3' 119090 TCONS_00053607 . 3' 120032 EMBV3_24154 GTGTGTGCAGCGCTTTCCCCTTATATGGTAGATCACTGGCTTTTACTATAATCGAATCCC Gene GeneID:508293|MOSPD2:NM_001101896:11_cdna Constitutive 2 NULL GeneID:508293 X GENE MOSPD2 MGC159831 motile sperm domain containing 2 EMBV3_37015 GGCACAAAGCCTGCAGATCAGTGCTGCCTCCTCCATCATATACTGAGACTTTACCTGGAC Gene GeneID:515533|IL20:XM_002693892:209_cdna Constitutive 0 NULL GeneID:515533 16 GENE IL20 NULL interleukin 20 EMBV3_06529 GGCATCATGAGAGGATTCATACTGGAGAGAGGCCATACAAGTGTACTGAATGTGGCAAGG Gene GeneID:100138905|LOC100138905:XM_002685266:79_cdna Constitutive 0 NULL GeneID:100138905 2 GENE LOC100138905 NULL similar to zinc finger protein 665 EMBV3_42407 GGGGCTGTTGGATGGGCCCCGCCCTCAAATTGTTCCCAAAACATTTGGTTTCATTACCAA Gene BVT0102_007568 + 0 NULL GK000018.2:25346804-25446366 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089176 1 XLOC_053962 NonCoding TCONS_00089176 XLOC_053962 NonCoding NonCoding - 18:25353693-25355047 - TSS66522 1354 2 TCONS_00089176_3 114 0.124076809453471 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000117038055101304 0.000662130471742098 0.00111494605207003 0 0 0 9.31693222116171e-05 0.000453959250635439 0 0 0 0 4.9657499561336e-05 0 0 XR_239284.1 CCDC13 PREDICTED: Bos taurus coiled-coil domain containing 13 (CCDC13), 2e-24 118 87.37 0.069423929098966 0 noncoding 0 0 0 0 0.158184663879281 0.243278848200161 0.00962208574297152 0.837120201043055 CAACACGTGTGTCTCCTCGGACAATTCATTTCCGAGGGTTAGACAAGAGCCCACTCTTGGGCCCCGGAAGGGATGCTCCTTCCTGCAACCACCTCATAGGCATGTCATGCAGGTAAAGAAAGGAAAAAGTGAACAGTTGTAGAGGTTGTGAGTGGCTAGGAAGGCTGTTAGACAGCCTGGGGCTTAGAGGGAGCAAACCCGAGTTGGGGGGTGGGGTGGCAGGAGAGGGGACACTGTGCCCCAGAGCTAACATTGTGGTTTCAAACTCAGCAGCCACCGAGGCAGGCAGGTCACAGAAATGACTAAGGTGGGCCAGGGGAGGTCTGTGGAGCTGAGAGCAACCAGCTGATGTCTGGGGGAACACAGGCCTGGGATAGCCAGAACTTTTTTTTTTTTTTTGGATTGTACCCACCACACAACATGCAGGATCTTAGTTCCCCAACCAGGGATCGAACCCGTGCCCCCTACAGTGGAAGCACAGATCCTTAACCTCTGGGCCACCAGGGAAGTCCCAAGAAGTTCTAATTTTTAAAGATATATTAGAAATCCAAAATTCTACATGAAATCTTCAGTTTTTTAAACATTGGTAATGAAACCAAATGTTTTGGGAACAATTTGAGGGCGGGGCCCATCCAACAGCCCCCAGGACTCCCTTCTCCCCACTGCACCTTCCAGAAAACTGAGGTCCAGGGGACCACGTGAACCCTTCCTGGGGTTTCCCCGCACAGGGATGCATCTGGGCAGCTCAGGACACTCAGAACTTGGCCTGGCCCGGCCCGGCCTCCACCCCCGCTCTGGCCCTTCTCCCTATGGTGAAAGGGACTTTATGGGGACAAAAAGCCACCCATTGTGTCACAGGAGACAAAGGCGCAGGGGACAGAGGCGCCGGGCGGCGGGGTGCCACCACAACTCCACACCCCACCTCCTCCCCTTGCAGAGGGGTAGGCTCCTTGGAATTCCCACTGTGTACTCTGCAGGCCACGCCAGGGCAGGTTCATAACCCAGCCTGGGGCCAACTGACCAGGTCTGGGCTGTTATCTAACTCTGCCAAACCTCCCTTTTGTCACCTGAAAAGCAGGCACAAAAAGTTACCACATCGAGTCACTGAACAAACTCTCCCCCAAGGGCCCACTCTGTGCCAGGCGCTGTTATAAGCATCAGGGAGTGTGGGGTGGGGGGAGAGAGCCAGGCAGCCAGGGTCCCCACCCACAAGCACGCAGCTCCCAGCCTGGGTTGCCAAGGAGGAGGGGGAGGAGGGGAACACTGACTCAGGGCCTGGGTCACCTTCAGGGCTTTCCAAACAGAGCCTTTATCACATTGCTTCTTATTCCTGAGTCCTGAGTTAATTAAAGAT TCONS_00085810 . 5' 6891 TCONS_00085810 . 5' 6891 EMBV3_02476 TGGAGACATTGGCTGGTGTCAGATATCAAGGCTCTTGGAAAATGGACAAATTTCTGAGCC Variant GeneID:513254|PEBP4:NM_001034440:76_cdna 600^759 2 EMBV3_11679 GeneID:513254 8 GENE PEBP4 MGC127772 phosphatidylethanolamine-binding protein 4 EMBV3_16349 TCTGTAGACCGTCAGTCACTAAACTCCACACGCCATTCAGAGTCTCTAACTCAGGCACCA Gene GeneID:782932|LOC782932:XM_002691501:459_cdna Constitutive 0 NULL GeneID:782932 11 GENE LOC782932 NULL similar to Chromosome 2 open reading frame 53 EMBV3_15342 TTTACTGGCCGGCAGAAGGCGGAACTCCCTCCGCCTCATTTAACGCGAGCCCTTTAAAAA Gene BVV0101_040870 + 1 EMBV3_33631 GK000005.2:110110819-110122672 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201631 1 XLOC_123276 NonCoding TCONS_00201631 XLOC_123276 NonCoding NonCoding - 5:110119493-110120075 - TSS151199 582 2 TCONS_00201631_2 78 0.0945017182130584 1 0 0 0 7.95017173937932e-05 8.5609812281084e-05 0.000212077778868464 0 0 0 9.4898472389795e-05 0 0 0 0 0 3.37195776863517e-05 9.07613377510734e-05 0 0 0.000492848306830345 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.096333457839881 0.435744172104738 0.0615358887329163 0.504031951851342 GTAAAAACAAGATCCCCGCATTCTAGCTCGATTTACCCTTTTCCATACAGGATTTCATTTCACCTTCACACCAACCCCAGAGGTAGGTAGAGCCCCTTTTTGATAAATGAAAACACCAAGGGCCGTTTTTGACAACCGAAAAACTGCCGGGAGGTCTGAGCCCCTCCCTAAATGAAAGGACAGATGAGGTCTGACCCCTTCCCCATGCTTGGGGTGGCTCCGCAGTTCCGAGGCTCGGGAGGTCCCCGGCGGGTCGCAGTGCGGGGCTGCCACTCGGGGACTACATTTCCCAGGAGGAATTGCCCGCAGCCCTGCGGCTCCCGAGTTTTTAAAGGGCTCGCGTTAAATGAGGCGGAGGGAGTTCCGCCTTCTGCCGGCCAGTAAACGACTCGAAGCTTGGTACCGTGCCAGGGTAGGCGGGTGGGGCCGGGTCGCGGTCTATAAGACCCCCCAGACTCTGCAGTGTCTGCGAGGCGAGGTGAGCTCAAGCCAATCTGGAGGCACCCTGTTCTCTTCGTGCCCACCTCTGTCTCGGACTCTATGTCCAACTCCGGGGAAACCCCTGCCAACCTCCGCCCCCCC TCONS_00193368 . 5' 2598 TCONS_00193368 . 5' 2598 EMBV3_00367 TTCACTGTGCTCTCTTGCTGCTGAACCCTGTGCCTTGCTTGTGACATCCTTGGACTCACT Gene GeneID:509047|TTC4:NM_001015554:34_cdna Constitutive 1 NULL GeneID:509047 3 GENE TTC4 NULL tetratricopeptide repeat domain 4 EMBV3_05989 CCGACGGTGGCCTCCCCCTTGTGCTTACTAATACATTCCCTTCTCCAAACCCACAAAACT Gene GeneID:282379|TAGLN2:NM_001013599:200_cdna Constitutive 0 NULL GeneID:282379 3 GENE TAGLN2 NULL transgelin 2 EMBV3_30159 ACACTGTGATCTTGAGTAAGCTGAGCAATCTCTCTGGACTTCCGTTGTCTTATCTGGGAG Gene BVV0102_108313 + 0 NULL GK000011.2:101315530-101334918 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034163 1 XLOC_020396 NonCoding TCONS_00034163 XLOC_020396 NonCoding NonCoding - 11:101328126-101329519 - TSS25162 1393 3 TCONS_00034163_2 46 0.399138549892319 1 0 0 0 0 0 0 0 0 0 0 0 1.64334992997632e-06 2.56689490496433e-06 0 0 0 1.89602075915684e-05 0 9.00608029557218e-05 0 0 0 0.000213084648796097 0 0 0 0 0 8.2743800843321e-05 0 0.000142429288068805 XM_005197834.1 LRRC8B PREDICTED: Bos taurus leucine rich repeat containing 8 family, member B (LRRC8B), transcript variant X1, mRNA. 4e-52 210 84.08 0.142857142857143 0 noncoding 0 0 0 0 -0.0488930889499462 0.77668701632419 0.015902846022447 0.80414633719902 CTCTGAGGAGTCCCTTCTGGATTCTGTGACTGGGTGGATGTCGGAGCAGCTCTGCCACCTCTGGGGGTCTGGCCCGTGGGCAGTGACCTCCTGGCTCGTGGCTTCTTGTTTTCCACCCCAGGCTCTTTCCAGCTTGCATTTCCTGGTTCTTTGTTAGGAACTGACCAGGCCCCCAAGGGCTCTAGACTGTCTACTCTCAGAGCCCAGCCGGCTCCTGAACCCCTCATACCTGGATGCTCTGACAGCAGTTTCTGCAGCCTGAAAAACTGGTCTGTGGGGACAGTGGGTTGGAGTGGGGGCGGGGGATGGGACTAGAATGAAACATCTGCACACACGCCCCTTCTCAACCCCCTAGAGGGCTATAGAGTGGTTCCGTGGCCTCTGGAATAACCTCTTTCTGTAGCTGCCCAAGAGGAAATACTGCCCAAATCCCAGTATTGACCTTCTTTGCCCAGAAACCTGTGGCCAGGCCTTGTTAGGGGCAGGGAGGGAGCTGGGATGGTGAAGGCAGATAGACCTTGAATTGTGAAAACACTGTGATCTTGAGTAAGCTGAGCAATCTCTCTGGACTTCCGTTGTCTTATCTGGGAGATGAGGACACCCGGAGAAGGGAAAGGGCAACTGCAACCCTTCAGGCCTGAATTGGGGGAGGGGGTTTCCTTCCTAATCTGTTTAATAGTTGATGACAGTCTGGATGATGAGCTGGGGGTTATAAGTGGATTGAATGTATAGAAATGTTAAATGATAATAATACAATAAATTGTTGTTTAGTAACTATATCGTGCAACCCCATGAACTGCATGCCAGGATAATAATAAATCGCTAACATTAATTTAACGTTTACCAAGTGCCAGGCACTGAGTTAAGCACTTTAGGTATATTTACCTACCTACGTAATACTCAGGACAAGCTTATGAGGTAACTATTTTTCTCCTTCCCAGGTGGCACAGTGATAAAGAATTCGCCTGCCAAGCAGGAGACTTGGGTTCAACCCCTGGGTTGGTAGGATCCTCCAGAGAAGAGAATGGTACCCCACCCCAGTATTCTTGTCTGGAGAATCCTATGGACAGAGGAGCCTAGTGGGCTGCAGTCCTTGGGGTCGCAAAGAGTTGGACCTGACTGAGTGACTGAGCATGCAGAGATGAGGAAACTGAGGCCCAGACAAATGAAGTTGTTCCCCCACGGCACTCAGTGTGTTCAAACCTAGGTGTTCTCACTCCAGCTTGCCCGCTTGTTTCTGTTTTTGGTGGTGGTGGTTTAGTCGCTCAATTGTGTCTGACTCTTGCGACCCCATGGACTATAGCCCTCCAGGCTCCTCTGTCCATGGAAATTCTCTAGGCAAGAATACTGGAGTGGGTTGCCATTTCTTCCTCCAGTTTCTTTCTTTGTTTTT TCONS_00026318 . 5' 1688 TCONS_00026318 . 5' 1688 EMBV3_31774 CACTAGTGCTGGTAGCCATTTCCCTCCTGGGGAAATTAGACGTGATTTACCCCCAATGCA Gene GeneID:540712|FBXL3:NM_001102246:1_cdna UTR3_Alt 2 NULL GeneID:540712 12 GENE FBXL3 MGC151742 F-box and leucine-rich repeat protein 3 EMBV3_41919 AGGGCATTCCCTTCAAACCGGGCACCTTTGCTTCTCTTCTCTTTACTCTGTTCTGGTTCG Variant GeneID:513878|WBSCR22:NM_001034457:170_cdna 376^460 3 EMBV3_25874 GeneID:513878 25 GENE WBSCR22 MGC133842 Williams Beuren syndrome chromosome region 22 protein EMBV3_16547 TAGGTCTCTCGCTTCACCACCACTTAGGTCCCACTGACTTTGTGAATTCCTGTGTTTGCC Gene GeneID:512444|GNS:NM_001075562:1001_cdna UTR3_Alt 2 NULL GeneID:512444 5 GENE GNS G6S MGC137372 glucosamine (N-acetyl)-6-sulfatase EMBV3_09109 CCATGGCCGTCGAGAAGGTGTCAGAGGCTGTTGTCAGCATCCGAAGAATCAAGAATTTTT Gene GeneID:100337316|LOC100337316:XM_002691953:4_cdna Constitutive 0 NULL GeneID:100337316 12 GENE LOC100337316 NULL ABCC4 protein-like EMBV3_02903 GATGTCTTCAGAGACCCTGCTCTCAAACGCAAGGCCCGACGAGAAGCCAAGGTCAAGTAT Gene GeneID:525649|LOC525649:XM_002698402:321_cdna Constitutive 0 NULL GeneID:525649 26 GENE LOC525649 NULL similar to ribosomal protein L27 EMBV3_15907 TCCCATTCTCTACTTAACCCATCATCTGCCCTTCTGTGGGGCTCGAATTATTGCCCACTC Gene GeneID:524658|LOC524658:XM_002693363:310_cdna Constitutive 0 NULL GeneID:524658 15 GENE LOC524658 NULL similar to olfactory receptor, family 52, subfamily J, member 3 (predicted) EMBV3_42081 ATCACGCAGGATTTCAGAAAGGCGAAAAAGGCCATCTCACGAAAAGCCGGGCTGAAGAGT Gene GeneID:100140202|LOC100140202:XM_002696127:241_cdna Constitutive 0 NULL GeneID:100140202 19 GENE LOC100140202 NULL hypothetical protein LOC100140202 EMBV3_27145 CGAGAGTTTCAGCTGGGTGAATCTGTAAAGTACTGTTCCTCGTCTCCTCCAGCGAGTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21360 TTTTGGCTTTTCCCGTGGGTCCTTGGAGGGGGGTATCCCTGAGGAGGCAGTCAAAAGAAA Variant GeneID:512445|ZNF187:NM_001101957:13_cdna 69^182 3 EMBV3_01248 GeneID:512445 23 GENE ZNF187 MGC151668 zinc finger protein 187 EMBV3_18896 AGACGCAGTGGTGAACACAGTGTGTTTTTGCATCTACAAAGTGAATGGTTTCCTTGGAAG Gene GeneID:513824|TMEM128:NM_001034454:22_cdna Constitutive 1 NULL GeneID:513824 6 GENE TMEM128 MGC127281 transmembrane protein 128 EMBV3_11607 CTCCTGCTCAGGCAGAGGACAGTCTGCTTTACCCAGAGCGAAAATAGATGAACTGTTCCA Gene BVT0102_123615 + 0 NULL GK000007.2:28790706-29648291 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216301 TCONS_00216298 TCONS_00216299 TCONS_00216300 TCONS_00216297 1 XLOC_131209 NonCoding TCONS_00216301 XLOC_131209 NonCoding NonCoding - 7:29132587-29135454 - TSS161364 1564 4 TCONS_00216301_2 46 0.168797953964194 3 0.455338450802512 0.000962830073909839 0.000568583367167534 0.000323109140108775 0.000680079488961134 9.74428388301155e-05 2.309798216297e-16 3.71130638392831e-12 2.61435916671102e-08 0.000333919470335615 0 1.3659547795618e-12 0 0 2.22876328217104e-10 1.49297081631112e-12 0 0 0 0.000259373386755435 0.00071658007925398 1.39550688096556e-08 0 0 0 0.000515754755881568 0.000257040372112173 0.000227900915666887 6.44858230392389e-12 0 0 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 3e-111 407 92.73 0.171355498721228 0 noncoding 0 0 0 0 0.0111927604742657 0.946977797614678 0.00417982215098861 0.941909319806284 GGGGCATGATTTTCTGTCACTGTTTGCCTTAACAGCTACTTGTAAACCGCTGTACTGGTTGAGGGACTAGGGCTTCACTCAAGAAGACGCAGTTGGTCTCCTCAGGTGTGACCTCGTGCAGGAACTCACTGGAGTCGGAGCCATGTAGGTGCAGCGCTTTCCTGCCAGCCCCCTGCACATCAGACCCGCGGAGGGAGCTCCCTGCTCCTGCTCAGGCAGAGGACAGTCTGCTTTACCCAGAGCGAAAATAGATGAACTGTTCCATTTTGAAGTCAAGATTGGTGCCACCCAAGTGGATTCCTGCTGGAAGGACTGTGATGACATCCTCCTCCTTTATCTACAGGACAAAAGGGCCTCTGGACGCTGTCAACGTTTCCCTGTAAATTATGACATTTGGACCCCTCTCTGGGAAGCACAGAAAGGCTTCCACGTTATAAATAAATTCTATCCTTTGTGTTCACAATGTGACCCATCAGGACATATGCACTTTGACATTTGTATTTATATTACAGAAATGTATATTTTGACCCACCTTACACTCATCTAAATTCAATTTAGAATTAACCCTGGGAGGTTGCTCTTTGGAGGTCAGAGATTAAGGTTAGATTTCAACAACATACAGCTGCAGACAGACTCAAAAGGAAATCGTAACTGTGATGTTGCTGCTGCTAAGTTGCTTCAGTTGTGTCCAACTCTGTGTGACCCCATAGACAGCAGCCCACCAGGCTCCCCCGTCCCTAGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGAGAAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTAGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGCGCCATCGCCTTCTCTGAAATGTGATGCTAACATAGCTAAAATTATGAACATCAGAATCATCTGCGATTATTCACATAAGAGTGTTGGGTTTTAAATCACCTATCAGACCTCTTTTTCCTAGGCAGAATATACCAGTTAGGTTTCCTCTTATTTGCTACTGTTTTTCCACTTTTGTGTTGTTTGGCTTATTCTCCAGTGAGTTACTTCAAGTTAAAGTTGTCAAAATTTATACTTGACAAAATGCTAGACTATTTGTTGCTGGAGCTAAGAGTGACTACAAGGCACCTCTTCCTCCTAGAAGGAAAAGATATGCTTGCTTAAATCAAATAATGATGGGGGAAAAATGCAAATATTAGCAGTGCATATTTACCCTTCGCACTGGATTGGGATAGAATGCTTCCTATTAAGTGGACTTTGATGCTTTGTTCCCTGTGGCAAAAGTATCCCCACTCTCAGAAAATAGAAATTGGGGGAAACACACTCTGCCTAGAAATAAAAACAAGGCTCTAATATTAAAGGGAAAACACAATGATATAAAAGTCAGGCAACAGCTCAGCAAAGCCATTACCATGCTTATTGCCATTTGAAGGCACAATGATTGAAGTTATTGTCTTAATGTAAGATTACTAAATAATGCATCCCATAAAGGAAAGAC TCONS_00212688 r 5' 325604 TCONS_00212688 r 5' 324050 EMBV3_31876 TCCGGAGTAAGACCGCTGCTCTCACAGACGAGAGGATCAGGACCATGAGTGAAGTCATAA Gene GeneID:100298398|LOC100298398:XM_002691959:1_cdna Constitutive 0 NULL GeneID:100298398 12 GENE LOC100298398 NULL similar to CG14709 EMBV3_36632 GGGTGAGGCCCAGCGGTTCTGCTCTGGAAGACAAAGCACCTTCAGTCAGCCTCTGAAGTA Gene GeneID:100294882|LOC100294882:XM_002691645:359_cdna Constitutive 0 NULL GeneID:100294882 11 GENE LOC100294882 NULL hypothetical protein LOC100294882 EMBV3_10569 AGCTTTATGACTCGCTGCTCGCCCTGGAAGGCCTCTGCACTTTGACGGCCGTCTCATGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33649 TGGGGTGCTCGTGTACTTAGCCAAGTACCATGGCTTTGGGAACGTGCATGCTTACTTGAA Gene GeneID:614893|CDCA7:NM_001037488:46_cdna UTR3_Alt 2 NULL GeneID:614893 2 GENE CDCA7 MGC128588 cell division cycle associated 7 EMBV3_17165 CTGCTGAAACCAAATCTCCCTGTCTCACCTGCTGTGCTATCCAGGTTTTAAATGGAAAGG Gene GeneID:540507|ANGEL2:NM_001099110:99_cdna UTR3_Alt 3 NULL GeneID:540507 16 GENE ANGEL2 MGC155123 angel homolog 2 (Drosophila) EMBV3_16841 CGGGGTGCTTGCTTATGGCCTTACAAAGTAAAGGGGTCATTCCTGGGGGTTCCTAAATGA Gene BVT0102_235637 - 1 EMBV3_00729 GK000030.2:96921351-96940081 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04525 TTTTAGGGACTGGTATTGGGTTTGGTTAAAATATGGCTTGGTGGGGATGGGACCGTGGCC Gene GeneID:505860|SLC25A44:NM_001077857:82_cdna Constitutive 1 NULL GeneID:505860 3 GENE SLC25A44 MGC142322 solute carrier family 25, member 44 EMBV3_40568 AAAATATTTGCCATGAAGGTGCTTAAAAAGGAGGAGAATTATTTATGCAGTTAGAAAGAG Variant GeneID:404181|RPS6KB1:NM_205816:12_cdna 382^529 1 EMBV3_21634 GeneID:404181 19 GENE RPS6KB1 S6K1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 EMBV3_00742 CCCGCCCAAATGCTTATTACCCTGTCCAGCCACACCTACTCTAACCACTCAGACTGCAGA Gene BVT0102_283950 + 0 NULL GK000021.2:23048042-23094095 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123109 1 XLOC_074663 NonCoding TCONS_00123109 XLOC_074663 NonCoding NonCoding - 21:23088798-23090427 - TSS91868 1629 5 TCONS_00123109_2 65 0.590546347452425 1 0 0 0 0 1.52931143840976e-05 0 2.85462022712862e-05 1.27684700101396e-05 0 1.45306430530698e-05 0 0 6.58505622605803e-06 0 0 0 0 0 0 0 8.16706487016324e-05 0 0.00020954629806186 1.68951213577582e-05 5.14567369371893e-05 2.33926690134412e-05 4.97378094706336e-05 0.000306326047270176 0 2.98011652577073e-06 8.85782224567033e-05 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 3e-156 556 81.53 0.347452424800491 0 noncoding CTGGTACAAAAGGTCAGTGTGGGAAGGAGGTGGGATCGTGGAGGGTCCTTCGGTATTGGGGGGAAATTAGGATCTCCATCTGGAGGCAGGAGCCTCAGTCGTCTTCACATCCCCGATGCCGATGCCTGCTGTAGAGCCTGACCTGCCCCAGGCGCTCAGCGAAGGTTTGCTGAGTGGCAGAAAGGGAGAAGAAGGAGGGAACTGCAGGAGGTCACAGCGCAGCTTCTCAGCCGGCTGTTTGGACACTGATCTCCTTGGAGCTCAGAGAGAGGAGAGGAGACTCTGCAGTCTGAGTGGTTAGAGTAGGTGTGGCTGGACAGGGTAATGAGCATTTGGGCGGGGCACCGTGTCCCTGGTTGGAAGTGGAGGAGCGGAGTCAAGGCTGTTCCTGAGACAGGAGAGCTGTGCCCATGCAGCCCATGTGTGGTCAAGACTGCAAGAGATGAACGGCCCACTCCAGTATTCTTGCCTGGAAAATCCCATGCACAGAGGAGTTCACGGGGTCTCAAGAGTCAGACATGACAGCACACACACACATCTGGTTTGTCAGCCTCTGTGTCATTTCTGCACAGAAGTATCAAATTAGATAAAGTGTTTTAAGTACTGTCATTTATAGAAACTCATTATGAAACAGGTGTGACCAGAGATTGGAAGGCAGCGTATATCAGGAGCCTAAAAGTGTCATAGTTTGTCTCAGAATTTATGTTAAATAATAACAGTGGAAAATTATGAGTGTGAATTGCAGAACACTCAACAATAAAATCTAGATCATCTAAATCAGCAACAGGTCAAACCTTAGGGCAAAATTCCTTTACATCTGTGAATCAGTGAACCATGACATCAACAGGGCCCTTGCTTCCAAAATACAGCAATGGGATAGGCTTATTGTCAGGCGAGTGTATGCTCCTCGGTTCCGTCTCATCACAACAAAGATGTGAAGTGACTGACATTAAAGCCTTTGGCGTGTCACAGCTCTCGGGTCTTGGACAGACCGTGTTATAGCTCTCAGGTCGCGAACGGACTGTGTAATAGCTCTTAGACAAATCAGTGTTGCAGCTCCGTGTTACAGCTCTATGTTATTTAAAAAATAGCAGGAAAATCCATCCTCGAGGCGTGAGGGCGTGTCGACCCAAAGACACAAAAAGAGCGCCCCAGTGTGTCGGGGCGGGGCGGGGGGGGGCGGGGGGGGTGGAGGGAGAGAGAGAGAGAGAGTGAGAGCGAGCCCTTTGGCTTCTCTTTTTATATGTTTTTTCCTCCCCACGGGCCTGCCCTATGTAAATTGGGCTGGCCAGGAGTGTTGTTCTACCTGAGGTCCTCACACCAGTCCTCGGACCTTCCTTTGTTCTATTTTCGTGGGCTTTTCCTGTCCTCGTCTTTTAGACACCACCATTCTGGACTCTGTTTCCTATTCTAACTACCTAACATTCCCCCCTTAAGAGATGGGAGGCCCAATTATTTGGGAATAGGGGTGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTAGGATGGCAAGGGGTATTGGGCCTCCCCCTCGGCTAGTCTCAAGTCTCAGAGTCCTTAGAGCGGTGTCCATCTAAGGGTGAGTGATATTTTCTGTGGTCGGCTGTAGTTTTATATCTTTGTTGAGC TCONS_00118852 TCONS_00118853 . 5' 26581 TCONS_00118852 TCONS_00118853 . 5' 26581 EMBV3_26600 GAGAAGGCTGTGACCAAGGAGGAGTTTCAGGGTGGCAGACTGGTCTGAAGGCGTGCAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24951 CCTCCAACTGGCCTTCTCAAATGAAGAATCTATGCCTTCGGTGTCTTTGTCATGATCTGA Gene BVV0102_245793 - 0 NULL GK000002.2:125658881-125698534 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43493 ACAGTAAGGGACACCAGGGTCTCCGCCCACCGGAACTCAGCTCCCTGCCTCTTCATTTAT Gene GeneID:540259|TRPV4:XM_002694534:475_cdna Constitutive 0 NULL GeneID:540259 17 GENE TRPV4 NULL transient receptor potential cation channel, subfamily V, member 4 EMBV3_33146 CTGTGTTTGTGGGGCGCACACTGGGATTGAGGAATCAAGAGCTAAGCGAGTTGCTTTCTT Gene BVV0102_017854 + 0 NULL GK000004.2:118243267-118265404 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190536 1 XLOC_116571 NonCoding TCONS_00190536 XLOC_116571 NonCoding NonCoding - 4:118247259-118247929 - TSS142904 670 1 TCONS_00190536_1 33 1 0 0 0 0 0 0 0 0 0 0 8.59744844586489e-05 3.41669627176089e-06 0.000389588989093058 0 0 0 0.00161623144282474 0 0.00101112607241539 0.000642173132090992 0 0 0.000443025038377268 0.00108171658523009 0.000650566789038474 0 0 0 0.00024371382660408 2.17370253092032e-05 0.000996059258410555 XM_005198192.1 RBM33 PREDICTED: Bos taurus RNA binding motif protein 33 (RBM33), 0.0 1207 100.00 0.997014925373134 NM_053043.2 RBM33 Homo sapiens RNA binding motif protein 33 (RBM33), mRNA. 6e-27 125 68.47 0.737313432835821 0 noncoding 0 0 0 0 0.105284595366585 0.461524531615109 0.0190377925427676 0.696208984351354 CTCAGCTGTCGCGAGTCCCCTGTGCTGCGTCGTCTCACCCTTTGCTTTGACAGGTCTGACTCCCCATTTGTTCCCGCAGGTCTCCGGCTGGCAGAGTAACCTCTGGGTTCTGTTGTTTGCAGGCGCTGCGCGGAGGCCGGCCCGCGCCCGGGCACTCACCAGCCCTCTGTTCCTCCCTCTCCTTTTGCAGGACCTCTCTTGCGTGGGTCAGTGTTAGTGGTAGCGCGCTCTTCTTCCGCTGGGAGGCGACGGCCCGTCGGGCTCTGTCGCGCTCTGGCTGGCTGTGACCCTTCCTAAGCGTATTGCTAAGTGCTGCGAGCTGGCCTGGGCCGGCTCGGCACGGCGTCTGCAGCTGTGTTTGTGGGGCGCACACTGGGATTGAGGAATCAAGAGCTAAGCGAGTTGCTTTCTTCTGGGTGATCTGCTCCGTGTCTCCACCCAGCGCACCACTCTCACGTTTGCGGGCGGGGATGGTGCCTTGTTTTACCCCGTTTTCCACTTTGCGCTAATCGCTGTGACAGCTTTATCAGGAATATGTGTGAAGAACCGTTGTGACATAGTTGGAAAAAATGTATTCTGTGTGTGTCATCTATGTGATTCCATGCCAAGAAATGTGTTTTGAACTGTATTGTAATTCGAGAGATGTGTTAATAAATACCTTGCACTTTCT TCONS_00183006 TCONS_00183007 TCONS_00183008 TCONS_00183009 . 3' 3103 TCONS_00183006 TCONS_00183007 TCONS_00183008 TCONS_00183009 . 3' 3772 EMBV3_41236 TACAGATCGTCAGCCTTTGCCGACGTAGAGGCGCATTTTAGAACGTGTCATGGAAACACG Gene GeneID:518200|ZNF280A:XM_002694686:268_cdna Constitutive 0 NULL GeneID:518200 17 GENE ZNF280A NULL zinc finger protein 280A EMBV3_39611 TGGGAGGTCCCGGAGGATGCTGGCCCCCAGAGATGAAAATAAAGATGACAGCTCCAGTGA Variant GeneID:509223|HEBP2:XM_002690275:23_cdna 191^326 2 EMBV3_08407 GeneID:509223 9 GENE HEBP2 NULL heme binding protein 2 EMBV3_20367 TTCCTGTCCTCTTTTAATGGTTCATCACCTCTGCCCTCCTCCCACCCTCAGACCAATAAA Gene GeneID:526526|RAB6B:NM_001101129:31_cdna Constitutive 2 NULL GeneID:526526 1 GENE RAB6B NULL RAB6B, member RAS oncogene family EMBV3_29803 TCTCCAATGCAAAAGCCACAGGTGGCCAGATTATCACAGTGGAGGATCACTACCCAGAAG Gene GeneID:507517|TKTL1:NM_001045972:43_cdna UTR3_Alt 2 NULL GeneID:507517 X GENE TKTL1 MGC134374 transketolase-like 1 EMBV3_01087 CTCTAATGTTGCCAAAGAACTGTTGATGGGTTTGAGAAGCCCTGGGACTGTGTGTGGGAG Gene GeneID:512033|CHMP1B:NM_001014904:92_cdna Constitutive 0 NULL GeneID:512033 24 GENE CHMP1B CHMP1.5 chromatin modifying protein 1B EMBV3_33825 AAGCTTCCCTGGTTGAGTAATGCAGGGTTCTTTAAGTCTGAAGTGCTGGTCAGGTGAGCT Gene BVV0102_028896 + 0 NULL GK000016.2:33599729-33913962 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19400 GGAGGGGGTGGGCGAGAGTGGGTGCAGAGGTGGTTTTGAATTATAACGTCTCATTTAGAT Gene BVT0101_011059 + 0 NULL GK000006.2:97613024-97652568 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205889 TCONS_00205890 1 XLOC_124778 Coding TCONS_00205890 XLOC_124778 Coding Coding PRKG2 6:97649671-97769009 j TSS153650 4764 1 TCONS_00205890_1 583 0.0270780856423174 18 0.960230272254204 0.000658278251226337 0.000880416302468526 0.000352701749305661 0.000368379018374411 0.0016556214492839 0.000149574767254505 0.000697737200772344 0.000510334262475384 0.00136343990674093 2.61682751866014e-05 3.53983328868954e-12 6.02127993083587e-08 0.000224987866920698 1.45332002995533e-05 0.000139982131194553 2.01999441200383e-11 0 0 0.000813977632070361 0.000694594236823837 0.000499052081791744 1.19340438993483e-07 0 0 0.000290366370505846 0.000965113477539083 0.00060206055047578 6.80885558017346e-12 3.01384595531034e-12 0 NM_001144099.1 PRKG2 Bos taurus protein kinase, cGMP-dependent, type II (PRKG2), mRNA. 0.0 3283 100.00 0.381821998320739 NM_006259.2 PRKG2 Homo sapiens protein kinase, cGMP-dependent, type II (PRKG2), 0.0 4250 82.57 0.880982367758186 TCONS_00205890_1 sp|Q13237|KGP2_HUMAN KGP2_HUMAN cGMP-dependent protein kinase 2; 0.0 1201 98.28 0.998284734133791 3 coding 1 1 1 1 0.0807937517979789 0.603608854843423 -0.0235582444629889 0.697288159737341 CCTTTCTGACTCTTGCTTTCTCAAAGGAAAATTCAGGGGGTTTGTTGAGCTCATTACAGATGCCCTTAATAAAAATCAATTTCTGAAGAGACTGGATCCTCAGCAGATCAAAGACATGGTGGAATGCATGTATGGGAGAAACTACCAGCAAGGGAGCTACATTATTAAGCAAGGAGAACCAGGAAACCATATCTTTGTACTGGCAGAGGGTCGACTAGAGGTGTCCCAAGGGGAGAAATTGCTGTCATCCATCCCTATGTGGACCACGTTTGGGGAGCTAGCCATTTTATACAACTGTACAAGAACTGCCTCTGTGAAAGCTATTACCAATGTTAAAACATGGGCACTAGATCGAGAGGTATTCCAGAATATAATGAGAAGGACAGCTCAAGCTAGAGATGAACAGTACAGAAACTTCCTCAGAAGTGTATCCTTGCTGAAGAATTTACCTGAAGATAAACTAACCAAGATCATTGACTGCTTGGAAGTGGAATACTATGACAAAGGAGATTACATTATTAGAGAGGGCGAGGAAGGAAGTACGTTTTTCATTTTAGCAAAAGGAAAGGTAAAAGTCACTCAAAGTACTGAAGGCCATGATCAACCACAGCTAATAAAAACACTGCAGAAAGGAGAATATTTTGGAGAAAAAGCTCTTATCAGTGAAGATGTCAGATCAGCTAACATTATCGCCGAGGAAAATGATGTCGCATGCCTGGTTATAGATCGAGAAACATTCAACCAAACAGTGGGGACTTTTGAAGAACTCCAGAAATATCTTGAAGGGTATGTGGCAAACCTGAACCGGGATGATGAAAAAAGACATGCGAAGAGATCCATGTCTAGCTGGAAGCTGTCCAAAGCACTCTCTTTGGAGATGATTCAACTGAAGGAGAAAGTGGCCAGATTTTCCTCATCATCCCCCTTCCAGAACCTTGAGATTATCGCAACACTGGGCGTTGGTGGGTTCGGAAGAGTTGAGCTTGTTAAGGTGAAAAATGAGAACGTTGCTTTTGCTATGAAGTGTATAAGGAAGAAGCACATCGTTGACACGAAGCAGCAGGAGCATGTCTACTCAGAAAAGAAGATCCTGGAAGAGCTATGCTCACCCTTCATTGTGAAATTATATCGCACCTTCAAGGACAATAAGTATGTATACATGCTTCTGGAGGCCTGCTTAGGTGGGGAGCTGTGGAGTATATTAAGAGACAGAGGCAGCTTTGATGAACCCACCTCCAAGTTCTGTGTTGCCTGTGTGACAGAAGCATTCGATTACCTGCATCGACTAGGTATTATCTACAGAGACCTGAAACCAGAAAACTTAATTCTAGATGCTGAGGGCTATCTTAAATTGGTTGACTTTGGATTTGCTAAGAAAATAGGATCTGGACAGAAAACATGGACGTTCTGTGGAACTCCAGAGTATGTAGCTCCTGAAGTCATTCTCAACAAAGGACATGACTTCAGTGTGGATTTTTGGTCCCTGGGAATTCTAGTATATGAGCTCCTCACGGGCAACCCTCCTTTTTCTGGGATTGACCAAATGATGACCTACAATCTGATTCTCAAAGGCATTGAAAAAATGGATTTTCCCAGAAAGATAACAAGACGACCTGAGGATCTGATTCGGAGGCTTTGCAGGCAAAATCCAACAGAAAGACTGGGAAATCTGAAGAATGGAATCAATGACATTAAGAAACACAGGTGGTTAAATGGTTTTAATTGGGAGGGACTGAAAGCACGAAATCTTCCATCACCTTTACAAAGAGAGCTCAGTGGACCCACAGATCACAGCTACTTTGACAAGTATCCTCCTGAAAGGGGGGTGCCTCCAGATGAGCTGTCAGGCTGGGACAAAGACTTCTGAGAGAAGGGAAGACGATCACTGCCTACAGAATCAAGAGGACTAGAAGTCCTAGTAATCCAACACTGATCATTTCTCTTTGGAGTTTGACACTATCTTTTGGAAGACCATTAGAGAAACGAATCCCTGCCCATGATCTGGGGGGAGGGGGTGGGCGAGAGTGGGTGCAGAGGTGGTTTTGAATTATAACGTCTCATTTAGATGCTGTGAATTATTCATGTGTTCCATTCTTTGCTTTTCTCAAATGTTGAAGGCTGTCTTAGTCCCCTCTTCAAAGTCAGAACCATTTTTGTTAAAGGGACATTATCTTCTCTGCAATCTATTGCTCCGTCCTTATCATTCTTGTCTTGTTTAAGTCCTAGTAAGGTATAAAAAATGTCTTGTCCTTGAGCAACTAAGTCATTCAAATAGAAGGAAGAACAAGGGTTAATTTTGGAAAATTTCCCTTTCCCAACAATCTCACGTAAGCATCACGGCATCTTGAAATTGCGGTTTGCAGGAAACTTGTTAGTCAATAGAAATTCTTGATTTTTACCTGCATTCAACCTAGAAATAAATTAATATGCTTCTGAAAGTAGTCTGGGGAAAGGCAAATTTGAATATTAGTCCTTGGTACCACTTCCTAACATAAATGAGTTAATTCTTCCTTCCAGGTAATTATATTGTATTGGAGAACTTAGAAAAAATAAACAAAGCAAAAAATATTTTTTATTTTCCCGTGACCAGCTGTGGTACCTCAGAGACTTTGCAAAAGTCTTGTGAGAGGTGGTTGTAACGTGTGGTTAATTGAGGGGCCTTTGGAAAAGTTTTATCTTACATATTAAATATTTTCACAATCAACTTAGAAAATATGCAGAAACTAGATTGTGAAGGCTTTTACTTCCCCTTACCTGTGGAGGAGAAAAACTTCCAAAAGGTCAAAATGTTGACTCTTTGAGACTCTGAGATATTTTGGCCAGTTCTGTGACTGTTGCTATTAATAAACCAAGAGTATAGAATAAACACAGTTAATTTTTAATGAAAATCCCATTGGCAAATATTGATGCAAACCAAAATCACTGTTGCATTAATAATTTTTTAAAAAGATGTATGAGTCATGGGACTATTTATAATTTTAGATATGTAAGGCAGGCCAGCCGCTCGAGAAGTAATGCCCAGTAACAAGGACACCCGACATCAAGTCCCCTCCTGTCTCCTCTGTAGTCTTCCAAATGATGGGTAGATTTGTTTCAATAGTGTTGGATGCCAGTGCCTAAGAACTTTGCTAGTAGAATGTTTTTATGTGTCAATCATGACTATTCTCCTACCCTCCTTTCCAAATGGATAGGAAGCCGACTTTCTACCTTTCTGATCTAGCAGAGTAAAAATGACGTTTCTTCTGCATTAAAAAGTTCCATTAATGAAGCTTCTGCATTGTTGAAGCTCCTGGTTATATTTCCATATGCTGATGTTCTATAGGAAAAGCAACCTCTACCCACACTCCACCCATATTTTCAGCATTCAGAGAATCAGTTATCTGCTTTCTGAAGTGTTAAAACAGATGAGTGAGGCCCCACCCAAGAAGGTGCATCCTTAACAAATTATATTTCCACATTTAGAATCTTTTTGCTGAACCAAAGAATTTTTGTTTCCTGGAGTAGTATTTTTAAAGTTGTACATAGATGAAGCATTTTTAATAGGATTGACGTAACCCGCTTAATGAATTTCTAAGATTTTTTAAAGAGTTTTATTTGCATTTGGTTTGTAAGCGCTGTATGTTTTTCCATGTATATATTTTTCAATTACCCACCTATAAATGTAGGAAATTTATGTATTAGGTTAATATTAGAACTGTACAGTTATACTAGCAATGGTATTCTCAAAGGTGATCAGTAGTTGTAATTCAAAAACAGCTTACAAATATACAAATAAAAACCAACTTAGAGTACTACAAGTTTACTTTGGCTATGACTGGCCATGCCATTATATAATCTCCACATGTGGTTTTATTGGGTTTCCTTTAGAGTACTTTATAAAGATGAAGAAATGAGAGACCTAACCATAATATAAACCCAGTTCTATTCTGTAGCTGGATGACCTTGGGAAAATGACTTCACTTTTTTGAGTACTAGCTTTCTCACCTGTAGAAAAAGGCACACTAAAATAATACCTACATTAGGGGCCTGTTTTGGGGAGTAAGTTGATAGAGAGTCCTTTACCAATTTCAACGAAATAATCAATGCTGCATAGATGGAAAGTACTGTTACTATCTGTTAGAATTAAAGGGGCCTTAATAACCATTTAGTCCTGAACTCTGTGTATCATTGGTATCTGTATGCCAACCATATCAATTAAATATAATGTCAATCTTTTCTTTTTGTTTTAAATCATGAAGTAAAGATAGTTAAGCTTTAGTGCATATGAAGAGTTAATCCTCACAAAAAATGAAGTGCTTATTAAGAGCTCACTGCTCACCTAAGTTTCTAAATTCTAACTTTTTATAAATTAGATATGTAGGTATTCTTATAAAATACAGAAAATTATTCCCCTATATACATATCCTTCATATTCCTAATCATTAAATCATTCCTAATCTGTCTTTTCTGGGTACAAAGTTGATTTTTCATTCTTGAGCCTCTTCTCTGTGGTGTCAGCTTTTCACAATGGTAATTTCCTATTTTCTCTAAATATCAAAATGTCTGGGGTGAGGAGAATGTTGTGATGACAAGGAAAAGATTTGGGGTAAAATACTATGGGTTTGAATTCCTGCTCTTCCTAGATATGTGTGACCTTGAATAACAAACCACATATTTATTCATCTATAACTTAGAGGTGGTATATGTAAAGTTTTAGAATATTGGGCCAGAATATTATTTCTTGTAGGTCATTGATAATAACCATTTGGAAATAAATATATACAT EMBV3_04333 CGGTAGCCTGGGGCACCGTGTCAGGCATTGCTGTGGAGCGAAATCAACGGCCTGCTGGTG Variant GeneID:535203|NTHL1:NM_001046397:237_cdna 699^808 1 EMBV3_07197 GeneID:535203 25 GENE NTHL1 MGC137409 nth endonuclease III-like 1 (E. coli) EMBV3_39592 ATGAAGAGATTAATCCCCAACTGAGCAAGGATCGTTGGAGACGAAGTTCAGCCCTTCTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24847 ATATTCATACATGTTTTATAAAATGCAACATAAACATACTTTGTAAATAGAATTTTCTAG Gene GeneID:540824|BCL10:NM_001078028:83_cdna Constitutive 2 NULL GeneID:540824 3 GENE BCL10 CARMEN CIPER B-cell CLL/lymphoma 10 EMBV3_22503 CCTTCATCCTTCCCAGTCCTCTGCCCTGATCTGTGTAACTCTTATCTTGGGTACTTGAGC Gene GeneID:531602|KPNA6:NM_001075954:45_cdna Constitutive 0 NULL GeneID:531602 1 GENE KPNA6 NULL karyopherin alpha 6 (importin alpha 7) EMBV3_32141 TTCTGCCAGCAAAACCAGCAGAAGTACCAGCTCCCCACCAAGAGCCTTCCCAAATATCCA Gene GeneID:786364|LOC786364:XM_002686027:196_cdna Constitutive 0 NULL GeneID:786364 3 GENE LOC786364 NULL hypothetical LOC786364 EMBV3_04902 TGACTAGGCCCTGACTGCTGTAACCAAGACCAGGACCCCAGCCTTTCTGCCCATTAACAA Gene BVT0102_272639 + 0 NULL GK000030.2:96542092-96802566 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247773 TCONS_00247779 TCONS_00247776 TCONS_00247778 TCONS_00247774 TCONS_00247777 TCONS_00247775 1 XLOC_151419 Coding TCONS_00247773 XLOC_151419 Coding Coding PHF8 X:96800131-96839870 j TSS185463 3560 1 TCONS_00247773_1 300 6 0.910564195480397 0.000694429905214032 0.000148406849365014 0.000143108130390872 0.000632225601237021 4.56745723372882e-06 1.13097296312031e-05 0.000289670452910829 0.00110398032857537 0.00028154463798602 3.48288134367791e-05 0.000126623971420865 0.000334842117449583 5.71272123260049e-05 9.45415657523506e-05 1.61446185475549e-06 0.000299143611941043 0.0111127376357434 0.00292212548654373 1.81395581670054e-06 0.000633994472315277 0.000221344665633623 0.00238965117791113 0.00347049626243033 0.00344435045014833 2.19924327535234e-06 0.000225226177615984 0.000784922557240393 0.000594318019913552 0.000316427921105699 0.0015779961681947 XM_005228233.1 PHF8 PREDICTED: Bos taurus PHD finger protein 8 (PHF8), transcript 0.0 6237 100.00 0.971067415730337 NM_015107.2 PHF8 Homo sapiens PHD finger protein 8 (PHF8), transcript variant 2, 0.0 3492 82.23 0.970505617977528 TCONS_00247773_1 sp|Q9UPP1|PHF8_HUMAN PHF8_HUMAN Histone lysine demethylase PHF8; 5e-146 441 96.00 0.996666666666667 0 coding 0 0 0 0 -0.0843212710129681 0.474353431555041 0.0133304251662963 0.799092293475985 CGTGAGGCTCCTGCCTCTCCCAGCACTCAGGAGGCTATCCAGGGCATGCTGTGCATGGCCAACCTGCAGTCCTCATCATCCTCACCAGCTACCTCCAGCCTGCAGGCCTGGTGGACCGGAGGGCAGGACCGAAGCAGCACGAGTTCCAACAGTGGGCTGGGCACAATGTCTAGCAGTCCTGCTTCCCAGCGCACCCCAGGGAAGCGGCCCATCAAGCGGCCAGCCTACTGGAAAACCGAAAGCGAGGAGGAAGAGGAGAACGCCAGTCTTGATGAACAGGACAGCTTGGGAGCATGCTTCAAGGATGCAGAGTATATTTACCCTTCCCTGGAGTCTGATGATGATGACCCTGCTTTGAAATCTCGACACAAGAAAAAGAAGAATTCAGATGATGCTCCATGGAGTCCTAAAGCCCGTGTGACCCCAACTTTACCGAAGCAGGACCGTCCTGTGCGTGAGGGGACCCGGGTAGCTTCCATTGAGACAGGCTTGGCTGCAGCAGCTGCAAAGTTGGCCCAGCAGGAGCTACAGAAGGCCCAAAAAAAGAAATATATCAAGAAGAAGCCTTTGTTGAAGGAGGTAGAACAGCCTCGCCCTCAAGAGCCCAATCTCAGCATGGCAGTACCAGCCCCAACTCTGGCTGCTACACCCCAGCTTCTCACCTCCTCATCACCCCTGCCTCCTCCTGAGCCTAAACAAGAAGCGCTCTCAGGAAGTCTTGCTGACCATGAGTATACTGCTCGTCCCAATGCCTTTGGCATGGCCCAAGCAAATCGCAGTACCACACCCATGGCCCCAGGTGTCTTCCTGACCCAGCGGCGCCCTTCAGTTGGCTCCCAGAGCAATCAAGCAGGACAAGGAAAGCGTCCCAAAAAGGGCCTGGCTACAGCAAAGCAGAGACTCGGCCGTATCCTGAAAATCCACAGAAATGGCAAACTGCTTCTGTGAGCTCCTTTGTGTTCTGCCCCTCACCCCTTCACCCCCATTGCCTTCTCCATTGTCAACTCTCGGGGCACTCCTGGATCCTACCTGCCCCGGACAAGGTGCTGAGGCGCATTGTCCTGCTTTCTTGGAACTGACCAAGGGCATGGACTCTCCCCATGGGCCCCTTCACCTACTCCCACGACTCCCTTCCCCACTTCCAGTAGAGCATCCTGCCTTTCTTTTCCATATCTCTGAGTAGCAGATAAATGGGAGAGGTTTCCAGCTGACTAGAATCCTCTCTCTGCTACTCCAATCCATTTCCCTTTCACCAGCCTTGTCTGCCCTTTACTCTCATCCCCACTTAAAGCTGGAAGGCAGAGTGAGAAGAAGCATGAGGTGAGCCTGGGCCCCTTGGTGTTTCCCTGGTCATGAAGTGGGAGGCCCAGCGCTCAACACTTTCTGCAGCTCTAGCCCTGTCTCCAGAAGCCTACCCATCTCTGCCCATTCTCCTTCATCCCCTCAGCCCAGTGGATGTGTCTCACTCAAGACTCATTCCTGGGAGAAGGCTCTGGCTTCAGCCCCCTCTTGCCAAATGCTTCATGGAAATAAAGAGGAGGGCCCAGAGTCTTCTTACTGCCCCATTTCCAGGGTGGCCTAGAAAGCCCATGGACTGACTTCATTCATCTTTGGAAAGAAGAAAGATTCCTGTCACTTTTCAAGGTGGGGACAGGACCAACACCCAAGACTTTGGTTGAGACTTTGTTGCCTGTTGGAGGAAGCTACTTTTGGGTGACTATAGACAAAGCCACCTCTCCCAAGGTGAGCTCCAGGGATTTGCCTGGAGTTTGAGGTCCTGCAGAACATTATCCACAAAGCTTTGGCTGGGCACCAGAAGGCAAAAACCATCTCCCAGAAGCTTGAAAGCATCTGCCACTGAAGCAGATAGCCCATGCTCAATGGCCTGATCCCTTCACCTAAACCACGGAGCACAGCCTGGACCTTCTGGAGAGGATGTGGCAGGACAGTTCATCTCGGGTTCTCCATCAGGAGCCTCCCTGCTTCTCTCCCCACCTTGAGGTCTTGGTCTAAAGAAGGCTACAGAACTCACACTTTTACTCCTGGGGCTCTGTACTCCCAGATGTCAGGTAGATGCTCAAACAGAGTGCTGACGGGTCACTCAGAACCCTGAGTGTAGGAGTGGTGATGCCCCTCTGTAAAGGAGCAGATCATCTGGTCCTCCCACCCTCTCTTCCCTTTGTGAATGTTTCTATTGTCCAGACAGAGCCCACCCCCTTCCTGGCCCTCCCCCAGCTCCCTCCACCTCCACCTGTCTTCCCTCCCTGGTGACCTGGACTGAATGGAGAATGTCTCCCTCTCTCCATTTTTGGCACTACCCAAGTGGAGTACTTCCTTGTCCTCTACCCCCCACTTTAATGTCACCTCAGTTTTCCCAGTGCTTCTGGGGAACCTAACAGCTACCATGCAGGCTGCAGGGAATATGTGAGGCTTCCTTAGTCATCTTCATGTCACCATTTTGTCTTTCTTTTCTCCACAGCCCCACATCTACTCTCCTTCATTGGAATCAGGGGTCCCTTAGCCCCATTTGCCTTTTCTGTCTTTTGGGACCCCGGGGCCAAGCAGTCCTCCATCTAGTCACACCAAAGGCAGAAAAGCCTGGCTACCTCCCCCCTAGCACTTGGGGTTACCACTCCCTTCCCCTCTGTTTCTGCCCAGCTTTGCTTTTCTTGGGGATTTCAGAGCAACAGAGGGTAGTGACGGGAGGAAAGGAGGGCAGCCTGTGTTCTTCTGTAGGCAACTGCCTGACTAGGCCCTGACTGCTGTAACCAAGACCAGGACCCCAGCCTTTCTGCCCATTAACAACCTCCTCCCCTTGCTCTTTCAAAGGCAGCTAATTACTAGCATATTCCCCCTGGTTCCAGGCCTCTTTCCCCTGTTTCTTTGTTAAAAGTTTCTGTGGAGCTGAAACCCAACCTCAGTTTGACTGGGTTTCTGTTTAATTTAGCTGGGCTCTCAGAGCCTGCTGTTTGTTGTTTTGTGTTTTAAATGAAAAGCAAGTTTACCCTCAGATTTATGCTTTTCCAAAGAGGCTAGTGTATTTTTTTTTTTAATGTTTCAGGTTCTAAGTGAGTTGGGAAGGGATTGGGAGTGGCCATAACCAAGGTTTAGAACATGGTGAGAGAGTTACCTCTGGTCTCTAATCCCCAGCACAAAGCTGGGGGTTGGAAAGGGGGCAGGGAGAGAGGATTTCTATTTACCTTTAATATATTTTTACAGAAAAGCAATTTAAAAACAAACCCACCGCTTCTGTACATGTCTAAATATATTTTTAGAAGTGGGTAGGATTGTGAATTTCTGATGCAGGGCCTTTTTATAAACAGGTTAGAATAGCATCATACAGACATCTCTGTTGTTTTTTTTCCCCTGTTTTTTTCTTATGTTGTGTTACTAATGTAATTTATATTTTTTTTTTGATCCTTCTTTTCCTATAGAGATAAAAGTGATTTATCTTGGCAATTGCTTTGCTCGGCATTCTTTTTTTATTTTTATTTTTTTTTGGTGGTGGTGGTGGGAGTGGTGGTGTGTTGGGGCCCAGGAGTATTGCCTTCTCTTCACAN EMBV3_41937 ACAGCTTTTTGAGCCCAACCAGCAATGCTTGTGCTTTGCCAAGAGCCATTGACTTGAGAG Gene GeneID:522265|SLC30A1:XM_002694265:259_cdna UTR3_Alt 2 NULL GeneID:522265 16 GENE SLC30A1 NULL solute carrier family 30 (zinc transporter), member 1 EMBV3_30667 ACATCTATCTCTCCTATGACCACAACATCCCTTACAAGTGGACTGCCCCAGAGGCGCTCT Gene GeneID:529814|PTK6:XM_002692249:1530_cdna Constitutive 0 NULL GeneID:529814 13 GENE PTK6 NULL PTK6 protein tyrosine kinase 6 EMBV3_31051 ATGTCCCTCATTGCTGCTGGCTTCACAAGGAGAAAAGTCAAGAAGCAATTGAAATTACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18406 TCTTCACTCAGTAGAGGCATCCTCCCATTCCACTCGGCAGGTCAGCATCCTTGCTTTGAA Gene GeneID:520174|NUP43:NM_001103096:2_cdna UTR3_Alt 2 NULL GeneID:520174 9 GENE NUP43 MGC142987 nucleoporin 43kDa EMBV3_41135 GGCAAGGTTCTTACTGAGAGTGACTTTCATGTCTGTTAAATGTTATACTGGTATTACATC Gene GeneID:508280|MGC127461:NM_001045999:22_cdna Constitutive 0 NULL GeneID:508280 27 GENE MGC127461 NULL hypothetical LOC508280 EMBV3_19422 CTGCCCTGTGTTTTATGGCGGGGTTGCTGCGCTGTTACTTGGAAGCAAAACAGTGTTGAA Gene GeneID:785756|LOC785756:XM_002695007:235_cdna Constitutive 0 NULL GeneID:785756 18 GENE LOC785756 NULL similar to salivary androgen-binding protein beta subunit EMBV3_28420 CTGGAGCGGCTGCTGGCGTGGAAACTAGCGGCAGTGCGTCTGGGCTGTGGACCCCGCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15073 AGGACTAAAGCACCCAAGATTCAGCGTCTCATGACTCCACGAGTTCTGCAACACAAACGC Gene GeneID:782738|RPS6:XM_002684883:99_cdna Constitutive 0 NULL GeneID:782738 1 GENE RPS6 NULL ribosomal protein S6 EMBV3_06747 ACATGCTGAAGAACAGCCTCCTGAAGCAGCCGTCTGAGGAAGACCCTGATGAAGGCATCA Gene GeneID:505272|EFCAB1:NM_001037585:17_cdna Constitutive 0 NULL GeneID:505272 14 GENE EFCAB1 MGC134277 EF-hand calcium binding domain 1 EMBV3_36268 TTCTCGAGCCTCTTTGTCTCCAAGCCGCTTGGCTCCAGCCTCCAGCCGGCGACACAATAA Gene BVT0102_267629 + 0 NULL GK000012.2:89270404-89304123 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27686 CCCCCAGCCCCTGCCAAACGCATGATGGAGCAAACAAGAGAGAAGGTCATTTCTTCATAA Gene BVV0102_136511 - 0 NULL GK000028.2:1393225-2167760 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161040 1 XLOC_097932 NonCoding TCONS_00161040 XLOC_097932 NonCoding NonCoding - 28:1436126-1436505 - TSS120372 379 1 TCONS_00161040_1 40 1 0 0 0 0 0.000109553387508979 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.78413040697812e-05 0 0 0 0 0.00115007923823901 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.53200710959365 0.118235101695041 -0.245363001240098 0.0630787142256776 ATGCAAAGAACTCATTTTTTTTCCTCTAGGTTTTTTTCTCATAATTTCTCCATATGAATCCTTGTACAATCAACAAGAGCCCTACTGATTTGAATTAGCTTTTCCCCATCTATCTCTTTCCTTTAGCATCTGTGCAAATAGGATTCTGCTGGCTGCTGTAACCACCCACTCCCCCAGCCCCTGCCAAACGCATGATGGAGCAAACAAGAGAGAAGGTCATTTCTTCATAAATGTAGTCCACGGCAGATATGACTGATTCATGGGTGGCTTTGCTCCAAATGGTGATTCAGACACAAGGTTCTTTCACCTGGTGGCCCCAGTATCTCTGACACACCACAGGTCACCTTCCAGCTTCCCTTTCCAACCCACTCCCCAGTCC TCONS_00158854 . 5' 7849 TCONS_00158854 . 5' 7849 EMBV3_18187 TGAGTCATTTTTCTGTGCCCTGAACTGGAGAGTGAATCCAGTGCCTGTATTGGAAGTGGC Gene GeneID:100336399|LOC100336399:XM_002700201:124_cdna Constitutive 0 NULL GeneID:100336399 X GENE LOC100336399 NULL CG11048-like EMBV3_10953 GTCTGACCTGGGAGGAAAATGGAGCTGTTTTCAGTGCATCTGGGGAAGGTGGTGTGGAGT Gene GeneID:767861|ECOP:NM_001076972:50_cdna Constitutive 0 NULL GeneID:767861 22 GENE ECOP DKFZp564K0822 EGFR-coamplified and overexpressed protein EMBV3_34290 AGTGTTATTCCACTGTCTCCTGACTTGTGTGGATTCTGATGGTACGTGTGAGTCAGCCTC Gene BVT0102_252397 + 0 NULL GK000013.2:13248004-14646478 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00047193 1 XLOC_027329 NonCoding TCONS_00047193 XLOC_027329 NonCoding NonCoding - 13:14591085-14592377 - TSS34369 1292 2 TCONS_00047193_2 43 0.853715170278638 1 0 0.000473882917999396 3.88871782532566e-05 0.000207714161290345 1.28547267539884e-05 9.17122420510517e-05 5.53723573605726e-06 3.61096804459444e-05 4.57796000229595e-06 7.93899588574982e-05 0 0 0 2.22080875924299e-06 0 0 0 0 0 0.000216460647855673 0.000161417648043713 0 0 0 0 8.58016188322362e-05 4.90782709758969e-05 3.62795934002209e-05 0 0 0 XM_585724.4 LOC508879 PREDICTED: Bos taurus aldehyde dehydrogenase family 3 member B1-like (LOC508879), transcript variant X1, mRNA. 2e-37 161 71.23 0.268575851393189 NM_018363.3 RNLS Homo sapiens renalase, FAD-dependent amine oxidase (RNLS), 2e-24 118 66.39 0.362229102167183 0 noncoding GATCTTCCCAACCCAGGGACTGAACCCACATCTCCTGTGTCTCCTCTTTGCCAGCACATTCTTTACTGTTGAGCCACCAGAGAAGCCCACAAGATTGCTATCCTTTAGAAAAGGCAAACAAATAAAGCAAGGCCCAGGATAAGGCTTTCTACCTGGGCAGTTTCTGAAACTGCAGTGCAAGGGAAACTCAGAGTCTGGCAGTCTTGCTGTATAGACGAGATAGATGTCAAAGTTACTGAAGGGACTAGAATAGACTGGGGAGAATATTGGGAAGGAGCAAGTGGTGCAGAGACACAGTTCCAAGGTTCTTTATTGCATTTTCTTGATTCTTCTGTAGACTGTCAATCTGCACATAGAGATTTCTGGATATTTTTCTTTCAGTGCTTTTTAAAAGTGTTATTCCACTGTCTCCTGACTTGCGTGGATTCTGATGGTACGTGTGAGTCAGCCTCTGTTTCACAGACAGGTTCATCTGTGTCATAGTTTAGATTCCACATTTAGGTGACACCACACACATTTGTCTTTCCCTTTCTGACTCACTTCACTTAATATGATCATCTCTAGGTCCATCCATGTCGCTGCAAGTGGCATTATTCCATTCTGGTTTTGAGCTGAATAGTATTCCATTGCATATATCAACGTGTACTGCATATTCTATATTCATTCATCTGTTGATGGACACTTAGCCATTTCGATGTCTTGGCTATTGCAAGTAGCACTGCTATGAACACACTGGTATGTGTATCTTTTTGAATTATCTTGTACAGAGATATGCCCAGGAGTGGGGTTAGTGTCATCCAGCAGTTTTACTTCTGGGTATATATGCCCACATAAAATGAAAGCAGGGACTCAGATATTTGCTTTCCAAAGTTTGTAGCAGGATGACTCACAATAGCCACAAGGTAGAAACAACCCAAATGTCCACTGACAAATAAACATGTATATAATGTGACCTCTAACTACAATACCGTATTGTTTAGACTTAAAAAGGAGTGAAATTCTGATACATGCTACAATATGGATGCATAATGATGACATTATTCTAAACAAAAAAAAAAAAGGCAGGTACAAAAGGACAAATTTCATATCAGATACCTAGAATAGTTGAATTCAAAGAGGCAGAAAGTATATTGGCAGTTTCCAGGGACTGGAGGAGGAATAGAATGGGTAGTTATTACTTAATGTTATGGAGTGTCAGTTTGAAAGATGAAAAGTTTCCCAAAATGGATGATGATAATGCTTGTACAACAATGTGCATGTACTCAATGCAAATAAATTTTGTACTTAAAAAT TCONS_00042021 . 5' 54102 TCONS_00042021 . 5' 54102 EMBV3_37735 AGAGCTATGTTTTGAAGTTCTGGTATTGCCAAGAGTGGCCGCTTAGCATTGAGCTGCGGC Gene BVT0102_217267 + 1 EMBV3_10029 GK000012.2:18991286-19014240 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036380 TCONS_00036379 TCONS_00034707 TCONS_00034708 TCONS_00034704 TCONS_00034706 TCONS_00036381 TCONS_00034709 TCONS_00036382 2 XLOC_021142 XLOC_020738 Coding TCONS_00036381 XLOC_021142 Coding Coding CAB39L 12:18991198-19107404 j TSS26500 4412 1 TCONS_00036381_3 328 0.223708068902992 11 0.962127275074222 0.000673206571201344 0.00043341790378653 0.000167274128138437 0.000497468525790175 0.000692084427921798 1.78823993540402e-91 7.67900401724174e-05 0.000177889408846555 0.000473451004196974 3.02180397682043e-21 6.67178260450553e-32 1.72315009711978e-60 2.17847969571468e-06 0.000115238111634663 5.23389908346256e-09 1.17762107914632e-11 0.000390192940498355 5.61062978001294e-07 0.000175609679571649 2.66147705087395e-09 3.13926994512468e-05 1.15771421484885e-09 1.57801112754687e-06 0.000861077088826157 0.000319174862224458 0.00104293151843259 8.63127509495437e-06 1.74573947286092e-08 1.36885897830928e-05 8.82314836105455e-12 XM_005213610.1 CDADC1 PREDICTED: Bos taurus cytidine and dCMP deaminase domain containing 1 (CDADC1), transcript variant X1, mRNA. 0.0 4383 98.64 0.56663644605621 NM_001079670.1 CAB39L Homo sapiens calcium binding protein 39-like (CAB39L), transcript 0.0 1458 88.60 0.257026291931097 TCONS_00036381_3 sp|Q9H9S4|CB39L_HUMAN CB39L_HUMAN Calcium-binding protein 39-like; 0.0 543 96.00 0.835365853658537 1 coding 1 1 1 1 -0.0758863822553976 0.583073110906704 -0.000614141464384176 0.989198508506223 CCAATGCGGATATCCACAGTCGAGAGGCCGGCATCGCTGGAGTGGTGGTGTCTGTTTCCTCTGGATATATGCATCAACTATTGAGAAGAAAGAATATCAAGAGCTAAATGTTCTATTTAAACAGTAGTTGCTGCTCAGAAAATAAAGATGCCGACCCAGAGTCAGTGGTTTATACGTTCTTCATGCAAGAGCATTATACTAAAGGAGAGAGTAACCTGTGTTGATCAGTGACTGTGGTGAAGGCTGAGAAAGTTGAAGCAAAGCTGCAGGTGATACAAACTACTAAGTGTTCTATATTGCATGAAGAGATTTCTATAGATGAAAAAATGCCTCTGTTTAGTAAATCACACAAAAATCCAGCAGAAATCGTGAAAATTCTGAGAGACAACTTGGCCATTTTGGAAAAGCAAGACAAAAAGACAGATAAGGCTTCAGAAGAAGTGTCAAAATCACTGCAAGCAATGAAAGAAATTCTGTGTGGGACGAGTGACAAGGAGCCCCCAGTGGAAGCTGTGGCCCAGCTCTCACAGGAGCTCTACAACACCGGGCTGCTGGTGACACTCATAGCCGACCTACAGCTGATAGACTTTGAGGGAAAAAAGGATGTGACCCAGATATTTAACAACATCCTGAGAAGACAGATAGGCACTCGGATTCCTACCGTGGAGTACATTAGTGCTCATCCTCACATCCTGTTTATGCTCCTCAAAGGCTATGAAGTCCCACAGATCGCCTTACGTTGTGGTATTATGCTGAGAGAATGTATTCGACATGAACCACTTGCCAAAATCATCCTCTTTTCTAATCAATTCCAAGATTTCTTTAAGTATGTCGAACTGTCAACATTTGATATCGCTTCAGATGCCTTTGCTACTTTTAAGGATTTACTAACCAGACATAAAGTGTTGGTAGCAGACTTCTTAGAACAAAATTATGACACTATTTTTGAAGACTATGAGAAACTGCTTCAGTCGGAGAATTATGTGACTAAGAGACAATCTTTGAAGCTGCTAGGTGAACTGATCCTGGACCGGCACAACTTTGCCATCATGACCAAGTACATCAGCAAGCCAGAGAACCTCAAACTGACGATGAACCTCCTCCGGGATAAAAGCCCCAACATCCAGTTTGAAGCCTTTCACGTCTTTAAGGGACCTTCTGAAAGATATGCCCGCCCAACTGAGAAAAATCTGGATTCTGGGGGTTCCAGTTCAAGAAGGTGGAGGATGCCTCCGTCCCTGCCTTCCCCCACCCCACGAGCGCTGCGGAGGGAGAACCCGGGAAGACAGCGGTGCGGAAGCTCCAGTGACTGATCAGCCAGGTGGGAGGCGGTCAGAGGCTCTGGGAGGCACTTCTTCAACAAGAAAAGCTTTTTAGGACACCCAGTGTGCTTGAGTAGGGAGAGAAGGTTACACAGCTGGGAGAAGGGTTTGGTTACAGGTTAGCAATAAAATATACAAAATCAAGGTCCCTGCAGCCCCACACAGAAAAAACAAACTTGAAATGCACGAAAATACATTTTATACAGAAAGTCATCACAGTACATAACGTGATAAAGCTGTGCGTAGCACTTAGAGTCATAATACCAAACAATGAATACTGATGCAACCAAATTGAAAGAATATTAGGAGGATGGAGAGATGGGAAGTGTGTGCTGAGGAGAGGGAGGTGAAAGAAAGCCCTTCCATGATGGAAATTCAAAAGAAAATACCTAAAACTGAAACACTATTAAGAAACATGTGATTTGGAGACAAATACAAAGTCAATCAGCTAAAATCCTTGAGCCTGGTGGCCTCTGGGGAGGGGTGATACAGAAGACAGAGTGGGTCTTACTGTTTCAAAGAAAGGTTCATAGATCTGTTTTGCTCATTTTAAATTTGTAGGTGTAATTTTACTTAAAAAATGACTTAATTTACAACGATAGAAGTCTTTTATTACTGTCACATACATGTTAAAATCAGCTAATACGTCAACAGGTACAGGGCAAATAAGCACGGACATTAAAAACAAAACTGAAAATGTAAAGAGAGAAAAAAACCAAAGCTGATATGATTTCAGGCCCTTGTGACATCCTGAGCTAGACTTTAAGAAATCATTCACCTTCTGGACTCTTGTGCTTCCAGTTCTGCAGAGGAGTATTCTAAATAGATGAGATCTAAGTTCCTTTGAAATCTGAGTCTGTTTAAGTGCAGTAGTTGAATAGGGTAAACACATTTTATGGACGCATTTCTAAAGGGTATTCCATTTAAACAGGCCTTGTTTTCAACTGGTACTGATTATTAGGGCTTTTCACTTTTCTTATATGTAAAAAATATGTAATAATTTTAAATGATCACAGAAAAACCCCTTAATATAACACATGAAATGGAGGTTCTAAACTGTTCCTTGACTTAATAAGCAGTAGTAACAGCCGCAGCTCAATGCTAAGCGGCCACTCTTGGCAATACCAGAACTTCAAAACATAGCTCTAAAGTGGGTTAAAAGCAGACTGCTGTGGTAGATCTGAAAGCTCAACTGTTCGTGCATAAACCGAGGAAGATTTATGAGAAGGTATATTCTCAAACTCATTAAGTAACTGAGGAAGAGAAACCCATGGAAAAGCCGAATAAAAGAAAAAGCGCTGGCAGTGATTAGATACAGGTAAATCCTCACATACCCCACCTAACAGCCGAGCGCCGAGCCAGGCCTGCGCTCATCCTACCTCCAGTCGGCAAAGCTGCTGTCCTTGGCAGTAAACAAATGTAGAGCTCTTTTTCAAATTATACATTTACTACGTCTTCCCAATCTTTGAAATTAATGGTGATGTATTTTTAAGGGCAAGTTCCGATTTCTCAGCCTGAGGGGTGACCCCTGTTGACTGTGGGTGACTAGATTTTAGGCTGCACTGTTGCTGCCCCAGGGGGCTCCTGGTGCAGGTTAGCAATCTCTGCATGAGTTCCCAATCGCTTCCCTTTCCTACTTCCCGGGGTGACCACCCATCTTCATTACTTTCTCAGATGTTCATCTCACCCCCACTGTTTGCCGGCCCACTCCCTGCAGCCCCTTCAGGGCCTCCACTTCTACGCGGCCTCCACTTCTACGCGGCCTCCACTCCTACAGGCCCTGCTTCCGTGACTCACCCAAGTGTCTGCCTGTCCTCCTATGTGTTCCTTCCACCACTGTTCCTTCAGTTACATCCACAGGGCAGTTCTCAACCTTGAAGGTCGTCAGTCACCTTCAGGGAATGCTGGCCGCAGCCCCGGAGTTTGATTCAACAGGTCTGGGTTAGGGCTTAACAATGTGCACTTCTAACAAGTCCCCAGATGAGGCTAACGCTGTTGGTCCAGGGACCCCACTCTGAGAAGCACTATTATTAATACGTGACTTTACGCTTACATCTGTCACTAGACTGCAAGTTTCTTGAGGTCAGGGAGCATTTCTTACACGTCTCATCTCCAGGGTCTAGACAGTGTCCAGCAGTCATTCAGTCAACAAATATTTATTGAATGCCTGTCACATGCCAGACACTGTTGCAGGCACTAGATTCAGCAGTTAAAAAAAAAAAAATTTACACACACAACAGAGGCTAAGCGAGCTGCTGTCCAAACAGGGGCACCGGCCCACGTGCAGGGTGGCCTGTGCACTCTCCTGAGACTGGTAGGAGGCCCTGTGAGGATACGAGAGGCCCCGGGGAGAAAGTGGGCGACAGCCCAGGTGAAGCTGACTCCCCACACAGAGCCCGTCACACCCCAGGGCTGCCTGCGGGCCACTGGCCAAGTGGCTCCCTCCCTATCTCCAGGAAAGTACAAAGCCTGTGCCTTCATCTTTGGGCTAATTTTCTGAAAGTTTCCTCAACAAATAAAAAATGAGAGGACTCATGAAGAACCATCTGGAAAATAACTGAATTGACCATCATGTTCACTGTCAAGGCTTTCAGTATTCTTAAGGTTTGCAAATGTTTTTATAAGGCCTTCCATTCAGAGCCCTGAAACGCTCTCTGCTAATTATATGGAGGGGATAATGGGCAGCATTTATGAATGAATTCCAGACTAAAATATTTCTTCTCTTGTTAGTGGTTTCAAGAGTCAGTGAGATCAGAGAATAATATTGTCCGAGAATAATGCTATCTTCCTATTGCTGCCCTGAATCAGTCCAACAAGTGATCATGATTTTTACACACTGAAAGACTGAAAAAAAAAAAGAATAACCTTGTTAGGAACACACTTTTATAATGGAGAGCAGGTCCACCAAATTCATTTTTATGACTCCAGGCTAATCAAGTAAATTCTGATTACCAGAAAGCTTTGGGTATAAATGGGGCCTTTTGGTGAATCACACATTGACTTAAAAATGGTCAGGTTGCTGTTTATTTCCCTGGAGTAGATTACTAATTATCACCTTCATAATCCAAAGGGATTAATATTTCTGAAAAG EMBV3_17314 CTGTGATGTGTACATGGCTTCATCAGCCTCTGTGCAGCGTTTTGGGTTGTGTGGTATTTG Gene GeneID:511160|RAB18:NM_001075499:28_cdna UTR3_Alt 2 NULL GeneID:511160 13 GENE RAB18 MGC139746 RAB18, member RAS oncogene family EMBV3_04934 CCCATCAAGTCCAAACCCTGGATCCTCCCCGTGGTCCTCACCAGTTTCATCATAACTTTT Gene GeneID:785237|ULBP1:XM_002690326:16_cdna Constitutive 1 NULL GeneID:785237 9 GENE ULBP1 NULL UL16 binding protein 1 EMBV3_42765 TCGGGGCTAGGGAGGAGCAAGTCGTGGGCTTTTCCTAGACTTGGCCAAAGAGAAACATTT Gene GeneID:519605|KLHL34:XM_002700349:9_cdna Constitutive 0 NULL GeneID:519605 X GENE KLHL34 NULL kelch-like 34 (Drosophila) EMBV3_10610 CATTGAATAGGAGTCTGCCTGCCAATGCAGGGGACACAGGTTTCATCCTTGGTTCAGGAA Gene BVT0102_205614 + 1 EMBV3_27559 GK000009.2:55194771-56339758 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04358 GTAAGGCCTCCCCAGACAGCCATTTTGCTTTTTTTGCATTTCTTTCCCAGGGGGGATGGT Gene BVT0102_272416 - 1 EMBV3_12807 GK000012.2:36340959-36373089 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38505 TTGGAGCTCTCACTATCTCAGTCCGATGTCTTGCACTTTACCCACTGAACAATGTGGGCC Gene GeneID:526757|SLC22A24:XM_002699300:256_cdna Constitutive 0 NULL GeneID:526757 29 GENE SLC22A24 NULL solute carrier family 22, member 24 EMBV3_36241 CTGTGCGTGTCGACCTGCTGTTCTGACGGGAAATGTTGGCTTCTCTAGGTGACTGATACA Gene GeneID:530483|URB1:XM_002684583:90_cdna Constitutive 0 NULL GeneID:530483 1 GENE URB1 NULL URB1 ribosome biogenesis 1 homolog (S. cerevisiae) EMBV3_31799 CCACCCCTTTCCCACCCATGGCCAAAAATGCAAAATAATTACATCCCTTAGGTGTATACC Gene BVT0101_041993 - 1 EMBV3_19291 GK000030.2:130300296-130307326 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245707 TCONS_00245710 TCONS_00245700 TCONS_00245701 TCONS_00245708 TCONS_00245709 TCONS_00245706 TCONS_00245711 TCONS_00245703 1 XLOC_150806 Coding TCONS_00245700 XLOC_150806 Coding Coding RPS6KA3 X:130193299-130305115 j TSS184384 7710 1 TCONS_00245700_3 712 0.04189364461738 22 0.93124357197156 8.48160641871169e-09 9.63640205753205e-08 0.000109076329869093 1.34043217080371e-05 0.000214213462923589 4.37210519484072e-63 2.94906580317412e-09 3.05231447468947e-05 2.70983657620182e-09 0.000259741040595435 2.01869662852954e-05 7.16415232672392e-11 2.60025161086934e-07 1.95208195437878e-09 1.46451823573399e-10 0.000345159238742999 6.07446016439239e-08 0.00275230763911304 1.2983460131876e-16 5.09204459262709e-09 6.6058237198842e-06 0.000277779184444409 0.000419848109879084 0.000871573738779863 0.000105566365582748 9.65115451614194e-55 0.000208849285950621 6.51027621602564e-07 1.14442605250709e-06 6.06314234755141e-05 XM_005228376.1 RPS6KA3 PREDICTED: Bos taurus ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3), transcript variant X5, mRNA. 0.0 1.380e+04 100.00 0.992088197146563 XM_005274575.1 RPS6KA3 PREDICTED: Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3), transcript variant X3, mRNA. 0.0 4976 94.14 0.419325551232166 TCONS_00245700_3 sp|P18654|KS6A3_MOUSE KS6A3_MOUSE Ribosomal protein S6 kinase alpha-3; 0.0 1481 99.86 0.998595505617977 6 coding 0 0 0 0 -0.185065950555382 0.626277587758895 0.0031334062998509 0.953994419232213 GCCCCGCCCCCGGGTGCGCGCGGCGGTGGCGGCGGCGGCCGAGCCTCGCTCTGAGAGACAGAATGGACAGCAAATTATGGATGAACCTATGGGAGAGGAAGAGATTAATCCACAAACTGAAGAAGGCAGTATCAAAGAAATTGCAATCACACATCATGTAAAGGAAGGACATGAAAAGGCAGATCCTTCCCAATTTGAACTTTTAAAAGTATTAGGGCAGGGATCATTTGGAAAGGTTTTCTTAGTCAAAAAAATCTCAGGCTCTGATGCTAGACAGCTTTACGCCATGAAAGTACTGAAGAAGGCCACACTGAAAGTTCGAGACCGTGTTCGGACAAAAATGGAGCGTGATATCTTGGTAGAAGTTAACCATCCTTTTATCGTCAAGTTGCATTATGCTTTTCAAACTGAAGGGAAGTTGTATCTTATATTGGACTTTCTCAGGGGAGGAGATTTGTTTACACGCTTATCCAAAGAGGTGATGTTCACAGAAGAAGATGTCAAATTCTACTTGGCCGAACTTGCACTTGCTTTAGACCATCTACACAGCCTGGGAATAATCTATAGAGACTTAACACCAGAAAACATTCTTCTTGATGAAGAAGGTCATATCAAGTTAACAGACTTTGGCCTAAGTAAAGAGTCTATTGACCATGAAAAGAAAGCATATTCTTTTTGTGGAACTGTGGAATACATGGCTCCAGAAGTAGTTAATCGTCGAGGTCATACTCAGAGTGCAGACTGGTGGTCTTTTGGTGTGTTGATGTTTGAGATGCTCACTGGTACACTACCTTTCCAAGGAAAAGATCGAAAAGAAACAATGACTATGATTCTTAAAGCCAAACTTGGGATGCCACAGTTTTTGAGCCCAGAAGCCCAGAGTCTTTTACGAATGCTTTTCAAACGAAATCCTGCAAACAGATTAGGTGCAGGACCAGATGGAGTTGAAGAAATTAAAAGACATTCATTTTTCTCAACTATAGACTGGAATAAACTGTATAGAAGAGAAATTCATCCACCTTTTAAACCTGCAACTGGCAGGCCTGAAGATACTTTCTATTTTGATCCTGAGTTTACTGCAAAAACTCCCAAAGATTCACCTGGCATTCCACCTAGTGCTAATGCACATCAGCTTTTTCGAGGGTTTAGTTTTGTTGCTATTACCTCAGATGATGAAAGCCAAGCTATGCAGACAGTTGGTGTGCATTCAATTGTTCAGCAGTTGCACAGGAACAGTATCCAGTTTACTGATGGGTATGAAGTAAAAGAAGATATTGGAGTTGGCTCCTACTCTGTTTGCAAGAGATGTATACATAAAGCCACAAACATGGAGTTTGCAGTGAAGATTATTGATAAAAGCAAGAGAGACCCTACAGAAGAAATTGAAATTCTTCTTCGTTATGGACAGCATCCAAACATTATTACTCTAAAGGATGTATATGATGATGGAAAATATGTGTATGTAGTGACAGAACTTATGAAAGGGGGTGAATTGCTGGATAAAATTCTTAGGCAGAAATTTTTCTCTGAGCGAGAGGCCAGTGCTGTCCTGTTTACTATTACCAAAACTGTTGAATATCTTCATGCACAAGGGGTGGTTCACAGAGACTTGAAACCTAGCAACATTCTTTATGTGGATGAATCTGGCAATCCAGAATCTATTCGCATTTGTGATTTTGGCTTTGCTAAACAACTAAGAGCAGAAAATGGTCTTCTCATGACTCCTTGTTATACGGCAAATTTTGTTGCACCAGAGGTTTTAAAACGACAAGGCTATGATGCTGCTTGTGACATATGGAGTCTTGGTGTCCTCCTCTACACAATGCTTACTGGTTACACTCCATTTGCAAATGGCCCTGATGATACACCAGAGGAAATACTGGCTCGAATAGGCAGTGGAAAATTCTCACTCAGTGGTGGCTACTGGAATTCTGTTTCAGACACAGCAAAGGACCTGGTGTCAAAGATGCTTCATGTGGACCCTCACCAGAGACTGACCGCTGCCCTTGTGCTCAGACATCCTTGGATTGTCCACTGGGACCAACTGCCGCAATACCAACTCAACAGACAGGATGCACCACATCTGGTCAAGGGTGCCATGGCAGCTACATACTCTGCTTTAAACCGTAATCAGTCACCAGTTTTGGAACCAGTAGGCCGCTCTACTCTTGCTCAGCGGAGAGGTATTAAAAAAATCACCTCTACAGCCCTGTGAAGTGACCTCAGTGAGATATTTGGTACCATGGTGTAAGTTGATAGCACAAGTTCTGGTGACAGGTAGCACATATCTGAGAGGCACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAATGCTGCTGCTCCTGCTGCTGCTCCCGCTTTTGTCTCTTCTCGCTTTAAATGATTGTTAGCAAGTTAGATTTTCCTGGAGCTTCGGATGAAATGAAAATGGAAACATGATGAAGATATATTCACTGAATCAACAAGAATAATAATGAACACATGAATACCACCTAAAAATACACTGAATAAAGTACTCTACACCACATAGCATTATTTTTATAGGAAATATTTCATGTCCCTTAAATATTCTTCGTTAGTTATAGGGATGGACAGTTTATGTTAAGCACTTAGCTTAAACAATCCGTTTCTATTAGCACTGTATCCCTTGTGCCATCCAACATTTTGTATGTTTTTGTAAACAGTTCATATACAGTACATTTCTGTACTGCTTTCTTTAACGTATACATGCCTTGTTTAACTTGGAATCTATTATTAATCAATTGACTATTAAATCTGGTTAAATAGTTCACCTGGATTAACAGTATTGTTGGACAGCCCTCAAAATGGCCAGATTGTAGAACAGCCTTTGAATGTAATACTTCCAAAATGTACATATCTTTCCCCATGTCTGTTTCACTGGTTCATTTGTTTGTTTGTTTCTTAAAGTCAGGTGCTCTGTCAGGCTAACCTAGAGAGCTTTTGTGATAGAGAAAGTTACTGTGTGTGTGTGTGTGTGTGTGTGGTATGACAGACATCAAGAGTACACCTATGAAGTTAGTCCATATACTTTGCAAATCCTTAGGGTCTTTTTTCCTTAATTAAGGAAGTAGTTCTTACATTTTTTATCTTAAATCGTCTCCATACTTAGAATTTGGCATACATTTGGGATTTTTCCCAATATACATCAAAGACCTTTAAAAGGCATGGTGAAGAGATGGCAAAGGAACATTTAGCAACAGGTCATTGAAATCCTATTGGATCTTTTGTGTCTAAATAGATCAAATTGCAGAATTTAGCATATGAATAACAGGATACTGTTCTTATATACCTGCAGGAAAAGTATGCTTTTTTGGGGGGGAAGAAAAAGATAAATCATAATGAATTATATCCCATTAAGATGCTCTACAGTAAACACTAATTTGAATGTAATAAAGGCCATGGGCCTCTCTATGAAATTTGGACTTAAACTTTCTTATTCTAGGGAATAAAACATTCTGGATCAAATATTATCTGTTCTAACCTTAAATCATAGCTGAAGTAGACTAAGTGAATGTTTAGCATTGAGTGTTTTCTGAATTCCTCCTAATGATTTATAGCCATATAATGCTTTCTTTTCTTTTTTAAAAAATTTTTATTGGAGTATAGTTGATTTACAATATTGTGTTAGTTTCACATAATGCTGTCTTTAATTTCAGAAATGATCAGTTTTCATAATGGGCACTGTATCTGCTTATTCATTATCTACATCAAATTTGGTAGTTTCCACAATTTCATTAAAGAAATGTCTGCATCCATTATTACCTGTATCTTTGCCAAGCTACCTAGCATACATCAGTATGTAATACAAAAAACATACGAGCAAGGAAAAGGTGTTTTAACTTATCTCGTCGAGAATGTGCCCGAACAGATCTTTCCTAGTCATGTACTAAGCCATTTACATCAGAAATCTCTTTTCCTGCCAGAAGCTTTAAATCTTCCCCCTGAGAGTACAAAGCCAAGAAAGTATGGTTTATCTAAATGTCTTGGAAGCCACTTGTTATTCCTTAACTTCTCCTCTGTGTAATTCAAGAGAAAGAGAAAAGTGATCATGCCATTTGCCCAGATGACACAAAATGATTATTGCCTAGAAATCAAATATAAATTTATCTTCTAAATAAAAAAATACATAAGAGGAAGGATTTCAGAAAATCTAGATGGACAAAGTTTTAAAATATTCTTGAGTATATGGATGCTAACAATTAACACCTGCTTTCCATTGCCTGGAAATAAAGGTTTTTTTTTTTTTTTTTTTTTTTCCTCCTCTATTAAGTGTTTCAAACCAGAAAAGTGAAGTTGCTCAGTCATGTCCGACTCTTTGTGACCCCATGGACTGTAGCCCACCAGGCTCCTCAGTCCATGGAATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCAGTCATCCCAAATTCTTGTCACTTATGTAATTCTAGGCAGAAAATGGATCTTTTCAGATTTTTGACACTGATGCTATTTCATAAGTGCTTAGGTGTATTGTTAATCATAGTCTTTTAAAACCAGAAGTAAATGTGTAAATCCTTATAAATTGTCTAGTCCAACTTTCTCATATTGCATGTAAAGAACCTGAGACCCAGAGCAAAGACTAGAATCCTTAACTTCCCATTCAGTTTCTTTCCCTCATAACACCGTGCTGCCTTCCCCTCATATTATCACATGACCATGTGCTGAGTTGTTCAAAAACTATAGTTCTTGGAGCAGTCCTCTGCTGGTACATGAATGCCTTCTTTGCCTTCTCTGCCTAGAAGAGCTGCCAGTTTTATTGGAGATAACTGGTTATATGTTCACAAAACTGAAGGCCTTCTGCCTAAAAAGCAGTTCATACTTTATTTCATCTGTGATTCTGGTGTTCCTATTGCCTTTGACTTAGAGCAGACAAACTTGGCCAACAATGTGCTCTAAATGTAGTGCCTCTGCTGGGATAACCTTTCCATTAATTTCTTCAAGTCCAGTTTCTCTTGGGCCCTACAATTGGAGTGAGGCCCTTTCCCATTAGTGCTGCTGGTTACTTCCCAGGAGGTTTTAGTTCAGTCTGAAGGATATTTCAGTATGAAAGAAGGAACTAAACTAACAGGCCACTTTCACAAACCTCCTCTTAGCTTATAATCCAAAATAATCCAGAATGGTAGGTTGAATTTAACATTACCAAGCACATACTGGAAAATCTGGATTACATTGTACCATGTGTTTTCTATCTTCCCTTTCAAGCGATGATGCTAAATTAAGGTAAGTTTTTTGTCCTCTGAACTTTTTGTATAAGTAATTTCAGTTCCTAATTCATAGACATGTCTTCTAAGTACAATAGACTCTTCACTTTAGCAGATTTGATATAGATTCATTTATTTGCAAGCAACCCCAAAAGTCCAAAAATATAATAATTTTGACAAGGCACAAAGTTGGGATGCTGTGAGGCTGGAGACTGACATGTGGGAAAAGTCACTTGGTGAGTGTCTGGAGAGGGTGTGGTGTGTATGCAGTAGAGATTCCGCATTTCACACACAGTGGGCTACAAGGAGCTGGTTTGGGTCAACCTTTTCCCAACTATTTTTAAGAAATGGTTACTGTTGGGACAAGAGAACATCATGGGAAGTGGGGCTAGTCTGTTAGCTGTACCTTGTACCCTCAGCTCAGGAAAGGCTTCATGATTGGGCACAATGGGTTGGGTAGGAAAAGCACTAGGGTACATCCAGCCTCAGGTGACAGCAGAAAAGCATTCACGATTTGGGGGCTTAGTACAAATGTGCATCACCACAAAAGCCAGCAGTACACACTTCAACATGGCTGTAATTTTTCTCAACTTCCTGGCCTTTATACATGAGCTGAAAATTTTCAGGTTGCTTGACTATATTTTATAGAGAAAATTCTCTCTTATGGTGGTATCGAGCATTTGAAATTTACAAAGGCATTAGGACAGATATCTCAGGAATGTAAATGGTCAGAAAAGGTCTGCTTTCTGTGATTAACAAATACGATGAGTTCCATAGCTGACCTTGGTGCTTAAACCAGGGGGTTCCAACTAGTGCTAGAGCTCTGTCTTCTGAAAGGTCCACTTCCATGTGACTAACAAACTGGATGTATACTTTGAGCCTTATTTAATTCACAGATAAGTTGACTTAACTCAGCATTTTTATTTCACTTAATGAAAACAGCCCTCTCTTCACCTCCAGATTGCTTACATTTTGCTGGTCTCCCCAAGTGACCATTAGTGGAGACCAATTAATGAAGGAATGAAATTTGCTGGTTTTTTTTTTTTTTTTTTTAATTTGTTTTCTTGGGACTGTGGTGTTCTGCAGAGCCATGCTTAACCACTTTTTCTAGTGAAGAGTCTACAGAATGATAATAACTAAATATGGATGGCCAAGAAGATTTTGTATCTACAGTGCGCTTTATATATTTTTGACACTGCTGTATTCTGTGTGATCGAATGACCTGTAACTGGTTCCAATGTGACTGAGTGTTCTCAATGAATTCTAGTAGCAAAGTCAACTTAATTTTCTTAAGCCTTGTATTACTATCTGTCTCACATTTACCACTTTGATTCCAGTCTTTTAACTGTTCATAACAGGGCATACCAAGGGTTGGGATGAGAGCCTACTTCCTACCTCTAAAGGCACTTTGCTCATTATTTTGCCATATAACCTTGAAGTGCATGATAAGCTGTTTAAATGTCCATGACTTCTCCCAGAGCAACTAGCAAAGTATATGACATTGAATAGAGATTAGTGGAAAGGAAAATTTTTAGAGACTAAACAGAGGTGTAAACCTCAAGAAAACCTCTTTAGAGCACATACCATTGGAGTACAATGTATGTAAATGTATGTGAGAAGAGAGTTGCTGTAATAGTCCTCTCTAAGTAGATTAGTTTAATATCTAATGGAAGTGAAAATCTTTACTCCTATTATCACTATAGTACTGAGTGAACTGTATACTGAGTTTTTCAAACAAGTACTTAAAGTAGAACTTTAAAATATAAAGCAAGGGCATAAGGACAAAGGTTTTGGTTTGCGTTTCTCTAAGTGTAGTTTACCATCTAAGGCTTTCTTTTTTAATTAAAAAAAAAAAGCTTCAAGGTATTGCCATTCCTTAGCATCCTTAATAATTATGGGTGATGAGTTTTTAACTCTTAAGATTATGTACCTGTATTACATTTATCTTAACTCTTACCCTAAGCAAAAGGGAAGGTATACACCTAAGGGATGTAATTATTTTGCATTTTTGGCCATGGGTGGGAAAGGGGTGGGTATCTACTTAAACAGTTTTTAAAAAAGAAAAAAGTCACAAATATTTTTATACTCTTATATATGATTTTACTTTATACTAGTTTCTCTCTAGTAAGGCATGCCAGAAGCCCATGACACCATATCATGAGTTTATATGTATTGTACCTTTTATTGGTGGTTAAATCTCATCAGATGCTTGGCACTGCTGCCATGATTATGAAATGCTTGTAAAGGATTAAATATCACTGAGTATTTTAAATTGTTTTACTTAAGAGTCTAATCTGGGAAGTTTTCAAATCATACTATTAATGTATAATCTAAGCTCTTTCAGATGTATCCACGAATAATCCTGGAACAATATTGCTTGTATTCCTGTCACAGAACAGGTTTTGTAATCTTTAAAAGAAATGAAAATTTATATAATAAAGTTTCAAATAAATGCATG EMBV3_20105 TTCCTTCTCATTGTGTACCTCCGTCCAAACCAGTTATTTGCCCAGACTACCTCTCATGGC Gene GeneID:514726|MARS2:NM_001098971:107_cdna Constitutive 0 NULL GeneID:514726 2 GENE MARS2 NULL methionyl-tRNA synthetase 2, mitochondrial EMBV3_35748 CCCTGGAGAAAAGAATTGCTCTGTGTATATCTCTTGGAAAATAAGACAATAGTATTTCTC Gene GeneID:282031|RAP1A:NM_174448:26_cdna Constitutive 0 NULL GeneID:282031 3 GENE RAP1A NULL RAP1A, member of RAS oncogene family EMBV3_40011 TGCAATAAAGGCAGCCACTGTGCATCCAGCTCACCTCCTCTAGTGTGGTTGTAGGTGTAC Gene GeneID:516866|LOC516866:XR_084004:189_cdna Constitutive 0 NULL GeneID:516866 21 PSEUDO LOC516866 NULL similar to alpha-kinase 3 EMBV3_27088 TACATTATTTCATGGGGAAACTAGGCTGAATCACAGCCATTCATGTAAAAGGACTGGGTT Gene GeneID:613674|VMA21:NM_001081616:104_cdna Constitutive 1 NULL GeneID:613674 X GENE VMA21 MGC142430 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) EMBV3_17397 ATCTGGAAGTGAAGGCCCAGGGGACATGGGGGGAAGAGGCCTTGGTGGTCAGAAAGAGTA Gene GeneID:444872|HSPG2:XM_002685785:627_cdna Constitutive 0 NULL GeneID:444872 2 GENE HSPG2 NULL heparan sulfate proteoglycan 2 EMBV3_19716 CCTGCATGATCTTCTGGGCCAACCCAAGTTTTCTACTTTTGTTTAACTTTTTGAGTTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31580 GCTCTTCATCCCTCAATGCAACTGGTCCATACCTTTCTTCTCACTTTCTACTTTCAGGCC Gene BVT0102_446416 - 1 EMBV3_25106 GK000007.2:63267312-63294620 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213882 TCONS_00213883 TCONS_00213884 1 XLOC_130563 Coding TCONS_00213882 XLOC_130563 Coding Coding SLC26A2 7:63280881-63301727 j TSS160118 5918 1 TCONS_00213882_4 734 4 0.716286879347565 2.20193852280815e-07 3.46443831159802e-10 0.000210497654229197 0.000132152116085431 4.76904156059135e-11 5.07747646292142e-08 9.15093131670091e-05 9.70664249328802e-05 5.71661184994756e-05 0.000138436265721616 0.000297621395037775 0.000198641219417069 0.00032046371886166 0.000206956053012413 0.000125376432036626 4.22609674904169e-07 0.000135356347435224 0.000364609833795955 5.78671841030118e-05 0.000228287672803336 1.20122482524997e-07 0.000275616490282418 9.99793891957596e-05 0.000406422709135596 0.00014346660880224 1.13193861705782e-07 9.09518074952219e-05 0.000150447532154492 0.000144306372329642 0.000170357312696226 XM_005209573.1 SLC26A2 PREDICTED: Bos taurus solute carrier family 26 (sulfate transporter), member 2 (SLC26A2), transcript variant X1, mRNA. 0.0 1.067e+04 100.00 0.999831023994593 NM_000112.3 anion exchanger Homo sapiens solute carrier family 26 (anion exchanger), member 2 0.0 3153 82.22 0.528894896924637 TCONS_00213882_4 sp|Q9BEG8|S26A2_BOVIN S26A2_BOVIN Sulfate transporter; 0.0 1511 99.86 0.998637602179837 3 coding 0 0 0 0 -0.123824824806742 0.406659920100858 -0.012425917030696 0.786928680568296 CCGCTCGCGCCACGCTACCGCCTCAGTCCCGCCACGGCGGAGGACGCGCCTTGGAGCCGGGTCGCACGGTACGGCAGAGACTCGAGAGGTTTGGAAAAGCCTTTTGACCCAGAAATCACTAAGAGCTATTCCAAAATAGAATGATGTAAGGAATGCACTCAAGCAAGCTTGGCCTGAAAGTAGAAAGTGAGAAGAAAGGTATGGACCAGTTGCATTGAGGGATGAAGAGCTGCTGTGTGTTTTCATCAGTCTGATTGACTTGCTCAGGAGGCTGAAACATCTGTCTCCAGAAATGTCTTTGAAAAATGAAGATCAAAATGACCTTTCACCCAAGGACTCAGTTAAAGGAAATGACCAGTACAGAGCTCCATCTGGGATCCATCTGGAGCCTGAAGAGGAATCACGTAATGACTTCTGGCAGTTTGAGCCCAGTAATCTTTTTAGACACCCTAGGATCCATTTGGAGCCTCAAGAGAAATCAGATAATAACTTCAAGAAGTTTGTTATCAAAAAACTAGAGAAGAGCTGCCAGTGCAGTTCAACCAAAGCCAAAAATACCATTTTTGGTTTCCTTCCTGTTTTGCAGTGGCTCCCAAAATATGATCTGAAGAAAAACATTTTAGGAGATGTGATGTCTGGCTTGATTGTGGGCATCTTATTGGTGCCCCAATCCATCGCTTATTCTCTCTTGGCTGGCCAAGAACCTATCTATGGTCTGTACACATCGTTTTTTGCCAGCCTCATTTATTTCATTTTGGGTACCTCCCGTCACATCTCTGTGGGCATTTTTGGAATACTGTGCCTTATGATTGGTGAAGTAGTTGACCGAGAACTATACATAGCTGGCTATGACACTGTCCATGCTGCTTCAAATGAGAGCTCATTGGTAAACCAGATATCAGACAAGACATGTGACAGAAGTTGCTATGCAATTATAGTTGGCAGCACTGTAACCTTTGTGGCTGGAGTTTATCAGGTAGCAATGGGCTTCTTTCAAGTGGGCTTTGTTTCAGTCTACCTCTCCGATGCCTTGCTGGGTGGATTTGTCACTGGTGCCTCCTTCACTATTCTTACATCTCAAGTCAAGTACCTCCTCGGACTCAGCCTTCCTCGGAGCGCTGGAGTGGGATCACTCATCACTACTTGGATACATGTCTTCAGAAACATCCGTAAGACCAATATCTGTGATCTCATCACCAGCCTTTTGTGCCTTTTGGTTCTTTTGCCAACCAAAGAACTCAACGAGCGCTTCAAGTCCAAGCTTAAGGCACCGATTCCTGTTGAACTCTTTGTTATTGTGGCAGCCACATTAGCCTCTCATTTTGGAAAACTGAATGAGAAATATGGCACCAGTATTGCTGGGCATATTCCCACTGGGTTTATGCCACCCAAAGCACCTGACTGGAACTTAATTCCTAGAGTGGCTGTAGATGCAATAGCTATTGCTATCATTGGGTTTGCTATCACTGTATCACTTTCTGAGATGTTTGCCAAGAAACATGGCTACACAGTCAAAGCTAATCAGGAAATGTACGCTATCGGCTTTTGCAATATCATCCCTTCCTTCTTCCACTGCTTCACTACTAGCGCAGCTCTTGCAAAGACACTGGTGAAGGAATCCACAGGCTGTCAAACTCAGGTTTCTGGTGTGATGACAGCTCTGGTTCTTTTGTTGGTCCTCTTGGTCATAGCTCCTTTGTTCTTCTCCCTGCAGAAAAGTGTCCTTGGTGTGATCACCATTGTAAATCTCCGGGGAGCCCTATGTAAATTTAAGGATCTGCCCCAGATGTGGAGGATTAGCAGAATGGACACAGTTATCTGGTTTGTTACTATGCTGTCCTCTGCACTGATCAGTACTGAAATAGGCCTGCTTACTGGGGTTTGTTTTTCTATGTTTTGTGTCATCCTCCGCACTCAGAAGCCAAAGGCTTCATTGCTTGGCCTGGTGGAAGATTCTGAAGTCTTTGAGTCCATGTCTGCCTACAAGAACCTTCAGGCCAAGTCAGGCATCAAGATTTTCCGCTTTGTGGCCCCTCTCTACTATGTAAACAAAGAATATTTTAAGTCTGTCTTATACAAAAAAACTCTCAACCCAGTCTTAGTAAAAGCAGCTCAGAGGAAGGCAGCAAAGAGAAAGATCAAAAGGGAAACAGTAACACCCAGTGGAATCCAGGATGAAGTTTCAGTGCAACTTTCCCATGATCCCTTAGAGTTCCATACAATCGTGATTGACTGTAGTGCAATACAGTTTTTAGATACAGCAGGGATCCATACACTGAAAGAAGTTCGCAGAGATTATGAAGCTGTTGGCATCCAGGTTCTGCTGGCTCAATGCAATCCCTCTGTGAGGGACTCCCTGGCCCGGGGAGAGTACTGCAAAAAGGATGAAGAAAACCTTCTTTTTTATAGTATATATGAAGCCATGACTTTTGCAGAAGACTCTCAGAATCAAAAAGAGAGACATATTCCCAATGGTCCGAATTTTTCCAGTGATTGATTGAGAAGGTAGATGGAAGGAAGAATCCTGTCTAGCCAATAGATTAAAATTTCAAGTGTGTAGCATCTTATACTGTGGAACTGGAAATTGCTGCACACAAGAAATTTTAACCTTTTGGCTAGGCAGAATTCTTCCTTTGAAGTTGATGGCCTTTGTAAATACAGAAATGCAACAGAGCTTTTAGTTAGGCAGAATCAAAAAAAGAAAATGTGGTTTCAAGTTTTCTCTCAAATATGAGATATTCTTGGAATTAAATATCTGTTGAACTGTAAATTAGCCCCAAACCTAATTACCATCCTGTTTTAGGAGATATGCATCTGAACTCTTGCTTCTCCAGGAGGTAAAGGGGTAAAGCTGGCATGTACATAAGAGGTGCTGGAGCCTGTTTGGCATGGCTCTTTGGAGAGAGAGGAGAAAGGAACTAGGGAAAGAATGTATGTCTTCTCTTGTAACAGCAAGTCAAGAGGCTTCTGGAGTGCAGGGTAGTAACTAGACAAGCTTGTTCTCACTTGAGCTTCTCTATCCCCTGTCTTTGCTCTCCAGATGGCAGTCAGATCTCTGGCTTTTTACAGGAAAGTATCGTTCCTCTCTGGCACAGTCTTATCAGGAGTCTGATGGCAGAGCAGGTTTGGGAAACCCTACCAGTCAGTCCCACATTATACAGAACGCTCATGGTGTGATACAGTTGATGTTTTTAGTCAGCCTTTTTGTTTAGGGTAAGTAGGTGAGAAAAGAGCTCTCCATGCCAGTCAACATAGTGAGAATCCTCCCTGTCTCTTCTGTGATTCCTGTCTGTCCTTGTTTCTGAGTATTAATCTGCCATTAAGCTCTGTTTTAACTTTCATGTACTGTGTTTCCCATGGAATCTGTTCTAAACCGCTATGTTTGATTGCCAGTGAGTGACAAGTTTGCCAGAGAAAAGGCACAGTGCTGACTTAGCAATTTCATGTAGCTTTTTAAGTGACCTTGAGGCAAACTGTTCCAGACAGATTGCAAAAAAGGAATGATTGACAACTTCCCTTAAACATTTTTAGTAGTGAATTTTTCTTTCCTTCCCGTGTTTAGCAAGAGTAAACTGGGAATTGACAGTCTTTCTCATATTTGAGAAGCTACTATTCATTTTTAATCTGTAAGAAAAAATTTATTGTGACCAATGGAGAAAAATGCACAGAAGTGACAGAATGCTTCCAAAACAACCATCAATAATTGTCGATGTTTTAGTGAAAACAAAACTAATGCTCACTGCTACGCACCCTGTTGATGTGTAATAAATACTGATGACAGTGACCACTTTTCGCTTTTTGGGCCACCTAAAACCATTGTGTAAAAGGATTTAGAAGCATCATCTTCATACAACATATTTTCTTTGGAAAAGTATGTCCAACATTGAAAGCTTATAGTTCTGTATCTGGACCTTTATGGGTGAGGGAAAAAACCAGATTTTCCAAACTTTGGATTAGGAGACTGGTTTATATGAGACTGAAACATTTAGCACACCATTTTAAACAAACAAGATAAAAACCACGAAAGTGCAAAATCATTTTTAACCCATCCCTACATTCTAAACAGTATGTTTATGAGAAACAAACCCTGTGTATAGCACATCTACTGAAATGGGAGACTTTTAAACATCTTTCTTGTTGGCTCCATAAACTGCAAGTGTTGATTTTCTTTTGAGAGAGCTCTGCCCATCAGTTTACATGAAAAATGCCTTCCTATCATTAAAGCAGTTTCTCAGGAGCTAGATTTCTCTCTTTGAGGTGATTTACATCACGATTAAATGTAATAGTGTCCTTAGAGTTTTGACATCCATTTAGAACTTAAGTCTTGAATTTCAGAAATGTTAACTGCTGTTTGTATTTGTGTCTCTTTTGTTTATTGTTTGTAACAAATATTTGCTCTGTCTCTCCAGTCTTAGATGAATAGGAATAGTAAAATCAAAGTATCTTGGTTGTCATTTGTTTTCAACCCAGTCTTGTACCTCACCCGAGCCAAGTTTTGAATCCAGATCATGGTAAATACCTAATGCCATGTGACAGAGTAATGAGTACATGTTCAAGATGACTTTATAGTTTAGCAAACCTTACCATGGGGGAATTAAAAAAAAGAGTCCAAAGAATTTAGAAAATCTCTTAAAAGAACAGAATAACAGGCTTTGACCTTTACCTCCCATTTCTGTCCAAAATGTAGATATAAACAATTCTGGAACTTTCTGCAATTAGCAGATTCTTGAATTGTGTTCTGGTTTGCTTTTCTCCTATCTACCCGAACAAATAAGACATTCTGCTTTTGGAAGCCATTTGTAAAAAATACTGAAGATACACTAGAATTTAAATCTTACCTTGTCTGCTTGGTTTGAAATCTGCCTGTACTTTCATGTTAAGATTTTTTGATTGCTGGTATTTAAAGGAATCAAGCCTGAAACCAAAGCCAAAGGAATCTGCTTTCTTGCTCAAAGGTTTGGTTGATTTAGTTGATTAGGTGATATTTTATACACTTTATTGACACAAAATGTCTTGTTTACTCTGAACTTTAGAGTCTAACTGAGGCATATTTGTATTGCTTATTGATGAATGTACAAAATTCTGAATATCTTAAAATGGTCATTTAATTGAAATGTATGTACACTCTTGATGGTTAAAACTCATACAACCAGAGGGGTAGAGTTCACCTAGAGTCAAAGGGTAATATTCAAGAGAGAGGTGAAGGGGAATAGACTATTAAAAAGATGATCTCTGAGCAAGCAAGGGAGAAGAGGGCCTCAGATGAATAGGATTCAACCCCTGGTTAGCTTCATACATGACTGTCCATAGTAGGGAGACCAGGATTAAGAGCCACAGCTTAGTCTGAGAGCAGACTCAGAACTGGATTCTGCTTCTAGAAGGGGAGTGCACAGATTCACCAAAGTGAAAGAGCTGGTAGCCAAGGTTGAGGCCAAAGCCGAGGTTGACCTACTGCAGAGCTCTAGACTGAGTGACTGTTGCCTCTGATAGCAGTAAAACTGACAGATGTCTAATTGACTTTTTTAAGGAGCAAAGGAAAACAAAATTTGGATAAACTGACATAGCTTTTAAACATCAGTAGACACTGAAGCCAAAATTTACTGGTAAATTTATAGCGTGGTAAATGGTGATCTTTAAATGGTGTCAAAATATTAGATGAATTCATTAGACTATTCTAATGCTCATGACCACATTTTAACAAGAAAAGTAATTCTCTGCAGGGGTATTCGGTTAGTAATTTGTCACTTAAGAACACGTGGGGTGTTAGCCCTGAGCTTAATATAAAAGTGAGAATAGGGTTGTAGTGAATTTTGGGGGGACTTAAACCTAGAAGTTATAATGATAAATTCAAGCTTTGTGCTCCGTATTCATGTTCTTGTTTTCCTCTATGTATTCCTAGAGATGAGCCGTGTAGACAG EMBV3_27420 CCTTAGAACGCGAGAAACTCACAGTGGACGAATGGAAGCAGCACATCTACAAGGAGATCG Gene GeneID:535327|MAPK13:NM_001014947:59_cdna Constitutive 0 NULL GeneID:535327 23 GENE MAPK13 NULL mitogen-activated protein kinase 13 EMBV3_03992 CCTACAGTCACAATGGAGATAAGGCTTAAGATGCCTGCAATAATCCACCCAATGATGCGC Gene BVT0102_030617 + 1 EMBV3_25859 GK000005.2:100971898-101036858 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196072 TCONS_00118507 TCONS_00243278 TCONS_00120355 TCONS_00120354 TCONS_00245635 TCONS_00204799 TCONS_00120356 TCONS_00070482 TCONS_00118495 TCONS_00160943 TCONS_00196073 8 XLOC_118225 XLOC_072646 XLOC_149941 XLOC_073146 XLOC_150781 XLOC_124526 XLOC_042260 XLOC_097836 Coding TCONS_00243278 XLOC_149941 Coding Coding TCTE3 9:105115349-105121705 i TSS182956 6356 1 TCONS_00243278_14 326 0.999685336689742 1 0 1.65896902131963e-05 3.83903161182665e-05 2.45951195756381e-05 3.50579155711653e-05 7.69727579247554e-05 9.82851188964414e-05 9.71427382545727e-05 5.85425960864709e-05 0.000934273919884255 0.000326430442389895 0.000393745298063309 0.000445142852921098 2.69126770481108e-05 0.000954285337021334 8.96675797173394e-05 0.0044184224932959 0.000218509302277616 0.000167904319545412 2.06839829088799e-07 0 0 0.000452758306388852 0.000652976329044989 0.00302186855814171 0 3.44859077520306e-07 3.68731602265334e-07 0.000151623899122533 0.000126391997712565 0.000238610302423682 XR_139747.2 LOC100847211 PREDICTED: Bos taurus uncharacterized LOC100847211 (LOC100847211), 0.0 2531 91.32 0.270295783511643 TCONS_00243278_14 sp|P61570|ENK17_HUMAN ENK17_HUMAN HERV-K_11q22.1 provirus ancestral Env polyprotein; 6e-49 176 34.30 0.825153374233129 0 coding 1 1 1 1 0.0477429040614153 0.763374109579753 0.0329907657141209 0.651972403457476 TTCAAGAGATCAGTTGAACTACTGCTATCATATTTTACTGGAACAATTCATGGTTCCCAGAAGAGGGGACACTCAATCTAGACATATAGAAAAGGGTTAAAAATAATATTTTGGAAGCATATCAGCAAGGGTTACATGGTCACTCATACGGGCTATCATAGAACAAATTGAAGGGCATAATGTTGATTTGTAAGTAAAAACTATTCGATCTTTACATGAATATGAGCTTAAGGAACAAGATATGCAAGGTGCTTTGAAATATAAGAATGTTATGCTCAATCAGACACAATCCTTAGAAAAACAACTTAGAGACATATATATACAGGACATGTCAAAACTGAAGCCACTTAGAATGGAAGTCATTTCATTCAATGGACAGCCCAAATCTGAGGTTTTTCCTTCTGCTCTGCCTGTAACAGCAATTGCTAACTTTGCTCATACTAATCATTTCACTCCTCCTCGGGAGATGTCTGCTTGCACTTTCGCTTTCCCAATTCAATTTAATCAACCTGCCCAAGGCCAAAATACTTGGGCTAATCTAGATTTGGGCATGTTGTCTAGCTTTAAGAAAGCATGAACTCTGTATGGACCTACTTCTCCATACTGTATAGAATTTCTTGGAGGATGGGCTGGCCATTGGATGCCATATGATTTTTTTTTTCAAATAGCAAAGATGATTTTAAATCCTCAACAATTACTGCAATGGCAAATATGGATTAATGATGAGGCCCAACAGCTGATGATTGACCAGCAATCTCATGGTAACCCTGCCAGTTTAACCTATGATATGCTCACTGGAACAAGAGCCATGGCTGATATGATTGTGCAATTAGCTAATATTACCCCTCAGATGTTACATTTCATTAAAGAAACTGCCTGCAGGGCATAAGCAAAGGTTGATAGCCCCAACTCTGATGGTTCATTTGTTAAGATTATTCAAGGACATGAAGAGGAATATTCTCAATTTATAGGAAAATTAAAGGATGCAATTGAGAAATCTATTAAGGATGTGACTTTACAAAATATTATTTTAAAAAAACTTGCTTTTGAAAATGCTAATGAGGAATGTTGATCCGTGCTCAGACCAATTCGAGAGACTGGCTCTTTTATGGAATATTTGAAAGCATGTAGGGACATCGGATCTATGTCCCATAGAGCAAAATTGGCAACATTGGAAATCTTTAATGTTCAGAAAGCTGCTAATGCCAAATGTTTTAACTGTGGGAAGCCCGGCCATATGAAAAAACAATGTTGCATGCCAACACAGGCCAGAAAAAATAATATGACTTCTAATAAGAAGAGACCCCCAGGAGTATGTCCAAGATGTAAAAGGGGGTTCCACTGGCTGAATGAATGTCATCCTAAATTTGATAAGGATGGAAACACCTTGAACTCCAGTGCACAACAAAAACAACAGGGAAACTGATAAAGGGTCATCCTCTAGCCCCACTACAAAAGGAGGACCTGACGTTATGACGCCACAAGCAGCTACATCTGAGAGTGATACACCTAGTCCTTAGGATATGGAACTAATAGAATTATACAGCCCCACAAAGTTCCCACTGGGTATTATGGCCCGAGTCCACCCGGGACAGTGGGACTGATTTTGGGACGTAGTAGCTGCACAGTGAGAGGTTTAGTGGTATTGACTGGTGTTGTGGATGAAGATTATGAAGGGGAAATACATGTTATGGTAAATGTTGTGAAAATGGGAAATGTATAATTACAAAAAGGGGAACGTTTTGCACAATTATTACTTTTGCCATATGTTAAACCAATGAAGGCATCTGATAAAGTTCAGCAGGGAAGCTTTGGCAGTACCAACCTTACTGCTACACTATCCACTTTATTAAAGGAACATCAGAAACCCATGCTTACTTTACACATACGGGAAAAGAATTTCACAGGCATGTTAGATACCGGAGCTAACATTTCAATCATTAGAGCTGCAGAATGGCCCCTTGATTGGGGTAAGGTTGTGGCTCCTTCTAGACTATTAGGAATGGATGAAACTGATGCCACACAAACTTTTGTCAGTGCATCCTATTTACAAGTGTATGGCCCTGATCAAATTGTAGCTTATCTTAAACCATATATTACTAATATCCCTATCAATTTATGGGGACGGGATTTTCTTGAACAAACGAAAGCCACAATTTCTTTAAATGAACCTTTTTAATGGGGGCCATTGAATTAACACCTCTGCCTCTCAATTGGGAATCTGATACCCCAATATGGACACCTCAATGGCCCCTAACTAAAGAAAAATTGGCAACTCTTACACAATTAGTAAATGAACAATTACAAAAAGCTCATATAGAACCTTCGTTTTCCCCATGGAATTCCCGTTTTTGTAATAAAAAAGAAATCAGGAAAATGGCGAATGTTGATAGATTTAAGAAATGTTAGTAATACCTTGTCACCTATGGGGCCCTTACAACCCGGATTGCCCTCCCCTTCTATGGTACCAAAGGATGGTATGTAGTTATCATTGACTTACAAGACTGCTTTTTTACTATACCTTTGCACCCTAAAGATAGAAAACGTTTTGCCTTTTCAGTTCCTTCTATAAATCACATGGCTCCTGTTAAAAGATTCCAATGGAAGGTGCTACCTCAGGAAATGATGAACTCCCCTATCATTTGCCAATATCTCCTATCTGTTTTATTACAACCCATTAGAGACAAGTATCCTACTGTGTTTATAATTCATTATATGGATGATATACTTCTCTCTATGGAATCTGAACTCTGTTTACAACAGTTATATAATGAAGTTACTATTACTTTTCAAAATCATGGCCTGCTTGTAGCACCAGATAAAATTCAATGGAAAGCACCCTTTAATTATTTAGGACATGTTATGGAAGAATCTAAAATCAAACCTCAAAAAACTCAAATTTCTGTGCATTCTCTACACACGGTGAATGATTTTCAAAAATTGCTAGGAGATATTAATTGGCTGTGGCATCTGTTGGCATCCCCACCTATGCCTTACAAAATCTATTTAAAATTTTAGAGGGATCCCCTGACCCTAATAGCCCTAGGCAACTAACAAAAGAGGTCAAAGAAGAACTGGCCTTAGTGGAGAAACGCATTCAACAATCTTTTTCAACTCGGCTAGATTATGATCAACCAGTTTCTTTATATATATTCCCTACTGAACATTCGCCCACTGCAATTATAGCTCCGCACAGCCCAATAGAATGGGTATATTTACACACTAAACAGTCTAAAAAAATTGTGTCATATATTGAGAAAATAGGGCACTTAATTGTGTCAGGAAGAAGCCATGTACAAACTTTGACTGGATTTGATCCATATGCAATACACGTTCCCTTGACAAAACAGGAATTGCAAATTGCCTTACAGTATAACCTGACCATGCAAATGGCATTAAGTGATTTTCAGAATGTTATCTCATTTCATCTGCCAAAAGGAAAATTATGGGACTTTCTACAATGTACGAAATTCATTGTAACTAATATCATTGCATCCCAGCCTATTTCCAATGCACCCACCTATTTCATTGATGGCAACAAGAAAGGCATAGCAGGGATTGTCGGCCCTGATATCAAAGAGAAATTACCCACTACCTATTCTTCAGTACAAAGAATTGAATCATATGCTTTATATGCTCTTTTGTCACTTCAACCATTATCCTTCAACATATATACTGATTCCAAATACCTTGCTTCCCTTTTTCCTGATTTTGTTACCGCCTTTTTATACAACCTAGATGAAGAATTATATACTCTCTTTTCACAGACTCAGGCTTTAATTCGCTCACTACGGAACCTTCCTTTATTGCACATATACATGCGCATTCAGGTTTACCTGGCCCTCTGGTCGCAGGAAATGATGCTGTTGACAGGCTCATAGCTCCCCTTTTTACATCTGCCAATGACGAACACGCTAATCTTCATACCAATGCTAACAGATTGCACTCTAAATACCATATTCCTCTCACTGAAACACGACATATTATTAAAACCTGTGATGTCTGCACCCCTTTGCGCTTACAAACTACGATTTCAGGAGTTAATCCCCGGGGGCAACAACCTAATTCCCTTTAGCAATCTGATTTCACTCACTGCTCCTTAAGAAAATTTTCTTTGCTTTTTGTCTCACTTGATACATTTTCAGGCTTTATCTGGGTAGTACCTGTCTCTTCAGAATCCAACAAACACACCATTTCCACACTCTTACTCACCTTCCCCATTATGGGGATTCCTTCTGTCTTGAAAACAAACAATGGACCTGTATTCACCTAGCATTCATTTCATTCATTTTTATCAGAATGGAACATAACACACATTACAGGAATACCCTATAATCCTCAGGGTCAAGCCATTATTGAAAAGAGCCCACCGCATTCTAAAACTCATTTATTAAAACAGAAAGGGGAAATATGGAAGAGGAGATACACTTCTTATCCCATGAACCCTCAATTACTATTATCTTTAACTAAACTTAACAAAAAATAATTCTGACACTCGTGCAGATAGACATTTTACAGAAGACAAAAACAGCAAATTAGAAATCAATACACCAATATGGTATAAGCAATTTAATCAGTGGCTGCCAGGAATCTTACGACTCCTAGGCAAGGGTTATGGTCTTGTCATTGCAGATGGAGAGGAAATCTGGGTTCCCCTTTGTCATGTCCGCTACCGAGAAGGACCCCAAGACCGGACTCCCTTGGGAAGTGACGAAGTTGACGCGAAGGGTCTCATCAATGACTCTGGAGGAGCCAATGAGGAAACGCCTTCGTCTGAATCCTTACCCGACATGGGCTCAAGTGAAAAAACATGACTCATCAGGCTGAGCAGACACTGAAGAGCAAGAGGAACATCATAATTGCTCCTGGTTTAATAGATCAAGCATTGGAGGCTTTCATAAATCTAAGACAAGTTTATGGACTGATAAGGACATATTGCTGAATTGGTATAACGGGGGCTTATCGCCCCCACGACCCAGGATTGTCGTCCCCATTGTGGGGCCAGAGCGATGGCACATTTGGAAAACTCCAGCAGCCTTAGAGCACTTCGCTAGTGTTTATGGGACTATGGGTGTGTTTCGTCCTTCTAATTATACCTTCCTATACAATAGTACTGGCTATATTCAGTCGTGTGTTCACCTTCCGTACTTGTTTATTGTAGGGCATTTTGATATTGACTTATCAGCCAAGATTGTCAATTGTACTGCATGTGCATTGTATACCTGCCTTAATCACACCATTTCATATCACAACGCTAGCATTGCGCTAGTTAAACAAAGATCTGAGTTATGGCTTCCCATAAACTTAATTGAGCCTTGGACTGATTCTATATTTCTTTCTGTATTGTTGAAAACTGGGCTTAGGCGATCTAAGCACATCATTGGGTGGATTATTGCAGGCATCTTAAGCCTTATCTCCATTGTGACTGTAGGAACTTTGTCTGGTATGGCTTTACATAATTCTATACAAAATCATGATTTTATCACTGCTTGGCACAAAGACTCTCATGATCTTTGGACTCGACAAGCTCAAATAGATCGGCAATTACAAACACGAATTAATGAGTTACAAACTGTGGGTATCCACTTAGGAGATCAAGTGCAGCAACTGGCTTTCCAAACACGTATACGTTGTCACTGGAATTTTACTTCTTTTTGTCTGACTAACATGCCCTATAATAGCACTGACTATCCTTGGAATAAGGTTAAGGAGCATTTGCAGGATCTCACAAATAACTCAAGTTTAGACATCAATTTGTTGAAACAACAAGTTGCTAATTTTCAAGTTAGGGTACCTAGGGAATTGTATAGCACTCAATTCTATGATACTTTAACCAAAACCCTATCATCTCTAGACCCTAGAACTTGGCTTTCAGGAAGCAATATTTTTATATATGTATTAATCACCCTGCTCTTTTTGTCCTTGATTATGGGATACAGAAGTGTCTACTCAAGACTCCATGCCTCCCACAATGGAGTCCAACTAGCAGCCGCCATGCTTAATTTAAAAACAAAAGGAGGATATGTTGGGAAGCGTAGTGCAAAATAGCCGTAAAAGGAGAAAGTCCTTGGGAAAATGGCGAAGGGCCAGAAATACCCGGCCTTGCACTGCAGACAGAAAAACATCTCCTGCCTTTGGTTATGCTCGGCGCCAAGAGTTAATAGCGATGTTACTTGTGAAAGCGGGTTGTGGGATAAGCCCATGAGTCATTTAGAGCACGCTGTCCTTGAAATGTTTTTACTGATTATGTGTTAACTCCGTATGCACTCTGCTGACCGTATACTTTAAGCTCTTTGTTCCTGCTTCTATAAAAAAGCTTGACTGCAGAAATAAACTTGCCAGTCCTTGCCAGAGAC TCONS_00238269 . 5' 3602 TCONS_00238269 . 5' 3602 EMBV3_00888 GATTGCATAAGCCTGTGTACCATCAACTGACTACCCAGGTGGATTTAAACAAGTAACAGC Variant GeneID:617901|MRPL13:NM_001034805:97_cdna 171^264 1 EMBV3_40815 GeneID:617901 14 GENE MRPL13 MGC127837 mitochondrial ribosomal protein L13 EMBV3_15955 TTACTCGGGAGGGGTCTCCAGGCTCACACCCCCACCCCGGAAAGCCGCGGGGTTAGAAAC Gene GeneID:100140275|LOC100140275:XM_002695845:288_cdna Constitutive 0 NULL GeneID:100140275 19 GENE LOC100140275 NULL hypothetical protein LOC100140275 EMBV3_37412 CTGTGTGGGAGGGTTCAGTGTGAGAATGTGACAGAAATCCCCCTCCTGAGAGATCATTCT Gene GeneID:782699|ADAM20:XM_002689461:15_cdna Constitutive 0 NULL GeneID:782699 8 GENE ADAM20 NULL ADAM metallopeptidase domain 20 EMBV3_33847 TGTTTTTCCTCTGATGGGCAAGGCTGAGTGAGGTGGTGATCCTGTCTGCTGATGATTTGG Gene BVT0101_050974 + 1 EMBV3_23077 GK000015.2:29233497-29257442 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159453 TCONS_00206742 TCONS_00240951 TCONS_00231120 TCONS_00037299 TCONS_00072364 TCONS_00214408 TCONS_00166385 TCONS_00058878 TCONS_00161700 TCONS_00229190 TCONS_00123553 TCONS_00159443 TCONS_00239057 TCONS_00011258 TCONS_00027491 TCONS_00194598 TCONS_00183431 TCONS_00187664 TCONS_00159451 TCONS_00135611 TCONS_00063227 TCONS_00055226 TCONS_00031794 TCONS_00200658 TCONS_00194599 TCONS_00240898 TCONS_00122098 TCONS_00063950 TCONS_00237211 TCONS_00137503 TCONS_00161069 TCONS_00194597 TCONS_00159445 TCONS_00072230 TCONS_00233091 TCONS_00237210 TCONS_00021091 TCONS_00162553 TCONS_00147522 TCONS_00110254 TCONS_00190035 TCONS_00207519 37 XLOC_097421 XLOC_125263 XLOC_147615 XLOC_140609 XLOC_021352 XLOC_044133 XLOC_130677 XLOC_101223 XLOC_036213 XLOC_098587 XLOC_138685 XLOC_075105 XLOC_145723 XLOC_006809 XLOC_015267 XLOC_117801 XLOC_111152 XLOC_113709 XLOC_081834 XLOC_037954 XLOC_033034 XLOC_018039 XLOC_122310 XLOC_147562 XLOC_073654 XLOC_038676 XLOC_144662 XLOC_083713 XLOC_097961 XLOC_043999 XLOC_142573 XLOC_011764 XLOC_099434 XLOC_089409 XLOC_066158 XLOC_116070 XLOC_126034 Coding TCONS_00037299 XLOC_021352 Coding Coding - 12:76724494-76742065 - TSS26948 5826 4 TCONS_00037299_8 113 0.617919670442842 5 0.668696642003415 0.00108607240391426 0.000584485779713726 1.86850561954068e-07 0.000519542362725803 0.0002411271233417 0.000174010683895097 0.000558189080895581 0.000479976911683683 0.00051400066000886 4.91305130994023e-05 3.62407368134271e-05 1.8669102568165e-08 1.4149919261787e-05 0.000155254192711607 0.000779379848666674 4.34291143949694e-09 0 9.10659895062794e-12 0.000712300154702628 4.242386186706e-09 4.98729222661059e-14 0 0 0 0.000894661175010931 0.000862501053245715 1.71028895819655e-08 1.21022019523332e-05 4.45081679445472e-10 1.53948527502752e-24 XM_003585566.2 LOC100336232 PREDICTED: Bos taurus multidrug resistance-associated protein 4-like (LOC100336232), partial mRNA. 3e-105 389 90.18 0.0487469962238242 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 1e-122 446 66.79 0.277548918640577 TCONS_00037299_4 sp|O15439|MRP4_HUMAN MRP4_HUMAN Multidrug resistance-associated protein 4; 5e-50 172 80.85 0.939393939393939 0 noncoding 1 0 1 1 -0.388417805223429 0.0410679342779144 0.0367615125835988 0.563767249355537 ACAAATTTTGATCTTTCTTCATTTAGGGTGGAAGGGAAGAAAACTGCTGAGCTGGTAAGATGGCCACACAAATAGCTACACACTTATGGGTGGGAGCCCAACGTTTTGTTCATTCAGTCCTGCAGTCATTCATTCATTCAAACAGCACATTCTAGGCAGTTTTGCTGCACACTGTCCATGCACCAGTGAGATAGTCATGCTGGACTTGGGCTTGAGTCCAAATCAGGATTCATCACTTACTGATTCAAAGACCCTGGACAGATGCTGTCCTTGAGCCTCATCTTTCTCATCCATAAAACAGGGATAATACCTTGCTGAATAGGGTGTTGTTAGAGTTAAAGGTGAGGGAAGTTCCCCAGAAATATGCATGACCGGTGTTCTGTAACATATGCCACTGTTACTTGTCTAGGCCCTGAGCTCATGATGAAAGACATCATGAGACAGCCTCTCTCTCCTCAGATTTCCTTTTCCCAGTCTACGAGGGCAGCAACAAGCTCACAGAGGTTCCCTGCACAATGCAGCATGTAAGATGCCAGAAAGCTGCCCCCATTAACACCAGGCATTCATCTTCCAAAATCATCTGAGTTCTTCTTTCTGTTACTTTTCATTAGGTCTTGCAGCTCTACAAACATAATCTGTGCTAAACTCTGTTGTTGTCCGAGGTCAAAAAATCTATTGGAGTTTGGAGCAAAGAAAGGTTTATTGCAAGAGTCAAGCCAGGAGTTCATGCTCAAAAAAATGCAAACTCCCTGATGGATTTCACGGGAGAGTTTTTACAGGGAAGGTGAGGGAGAAAGTGCAGTGTAGGTTTCCCTCATTATTCTCTGATTGGTTGATGATGAGGTAACAGGGTCATGTCACGGGGTTTAACATCTTCAGTCCTCAGGCTCCAGATGGTGTGGGGGCTCCCTGCTCATGGTCATCATGCAGTTAACTTCTTCCATCTGAGAGGACCGCGCTGTGTCTGAGCCTCCAGCCTCCCCGCCGGCGCCTCCAGGAGCAGCTCCATCACCAGAGCAGCGCGACCCCGGCCCGCGGCCGCCTCCACCGGCAAGATGCGGAAGCCCAACCCGCTGCAGGACGCGAACTTCTGCTCGCGCCTGTTCTTCTGTTGGCTAAACCCCTTGTTTAAAATTGGTTACAAACGAAGATTAGAAGAAGATGACATGTACTCTGTACTTCCGGAAGATCACTCCCAGCACCTTGGAGAAGAACTACAAGGGTACTGGGATCAAGAAGTTTTGAGAGCTGAGAAAGATGCGCGGGAGCCTTCTTTAATGAAAGCAATCTTTAAGCGTCACTGGAAATCCTATTTAGTTTTTGGAATTTTTATACTTCTTGAGGTTAAAACATAGTGTTGTGGAAGGAGAAGACATTTTATACCACATTATGATATTATTGATGGTCAGTAAATAACATAAATGCTGAAAGTGATCCTTGACCAAAAGAATATACTACAAGCTCAAGAAATGTGGTTTGGAGGACGTAAACTTGGACCAGAGCCCAGATAACATAAGACGTTTTACAGGTGCTCAGCAAGTAATTGTTAAGTTGCCCAGTTCACATCTGATAAATGCTTTCCTAAGAAGGGATCGTCATCTCTCCCCTCCTGTGATACCGAACCCATGGCCCTGCATTTGGGCTGGAGCTCCCAGAGCTCCCAAGAGTACACCCTTCCCTGGGCTGCCTGCCTCCTTCCCTGTAGGCTGGGTCACCCAGGCCAGAGCTCCCTGTGATGAGGAGCTCCAGCTTCATCATTGAATTGCAGAGACTCCATGCACCATCCATGCTGGTTTCTGTCCCTGGATGTGGGGTGGTTTCCTGCATGAAAGGGGATCCTGGTAGCCTGGCATTAGCAGAAGGTGTAGGAGAGGATGTGGAGTAGACAACCAGAGACAGAAAGCAGTGAGGTCAGTGACCTTCATGACCCTGAAGATCCTGGGTCAAGATCCCTCAGAGAGACAGTTCCAACCTGGGGACACAGTGCCATCAGCCCATCTATTCTGGCTGAGCCTACTCAAGGTCTACTGCAGACCCACTTGGGTGGCTTGTGCTCTCAGTGGTCCCTTAGTTCTGCCATAGGGACATGGGTGGCCTGTGAGTGTGTGAAAGCAGAAGGGATGGAAGATGCAGGTGCTGTGAAAGGGGTGGAGAAGGTGGTGAGTTGTCATAAGTCCATTGTGTTGAGGATAAAGTGGGTGGGCCAGGTGGTTTAGAGTTGGGGGGTGTGGCTCTTGTTTAAAGGTTGTGTTGTACCAGAGGACACTGTGGGTAGCAGGCAGCAGAGTAGGTGAAGTCTGCCCCACACAATTGGAGAGACCAGAGAATCTGTCAGCTCACAGGTGACTTAATGGTCCTGGGAGATGGAGTCTTTGATGACAAAGGTGGGTTGACCATTGTGTCAGAGAGTGGGGACAGGTATGTGGGGTGGAGTGCCACCTTTGAGAGGGCATTGATGACTGAGATACTGCAGTGCCTTGTGAGGGCAGGGTGGAGTGTTGATTTCAAAGTTGTCCAGCCCAAGTAATACTGCCTGCTGGGGATCTAGGAGGGTGAAACCTCTTTCAGGAGGTTGGTTGTTGGTCAATCATGGCAGAGAAGTGGGAAGTTGAGGACCTGGTAAATGTGGGGGCTCATTTTCTGTAGTATTAGAAGTACTAGTAGCAGATAACAAGAAGGTGGAGGAGTAGGTGGACCTGGAGTACATCTCTCTCCATGATACATCAGGAATACACTTTCAGGAATACATCAGGAAGACACAGAAGTGCATGCAGAACACCAGCTGAGAGTGGACAGGAGTACCTGGCCAGTGGAAAAGAATATATAGAGCCACACAAAACTTGAGATCAAGCCCCGAGGCTTTGGAGTGGGTGCACTGACTCCACGACCCTAGTCTACCAGAAAACTAACCCTAGGGAGTATCAAATAGTGAGAACTCACAACAAAGGAAATCACTTGAATACAAGGCCCAGCATCACCCAACCACCAGTAGCACTGTGTGGAGGATGCCTCATTTAAACAACAAACAAAACAAACATACAAACCCAATCATCAGCAGACAGGATTACCACCTCACTCATCCTTGCCCATAAGAGGAAAAACAAACAAAAAAACTCAGCACAGATCTCCCCTATATGAAGCTCACACAAACCACTGGACCAACCTTAGGAGGGCAGAAAACAAAAAGAAGAAAGAATTCAACCTTGAAGCCTGGGAAAAGGAAACCTCAAACACAATAAGTTAAAAAAAAAAATGAAAAGGCAGAGAAATGCTACACAAATGAAGGAACAAACTAGAAAAAACAGAAGTCCAAATAAATGAAGAGGAAATAGGCAAGCTACCTGAAAAAGATTTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAACTGCAAGAATAAATTAACAAAGACCCAGAAGAATTGAAGAATAAACATTCAGAGACAAACAACACAAATACTGAAATTAAAAAATACTCTAGAAGGAATCAATATCTGAAGCAGAAGAATGAATCTGTGAGCTGGAAGATAAAATGGTGGAAATAACTTCTGAAGAGCAGAATAAAGTAAAAAGAATGAAAAGAACTGAGGATAGCCTCAGAGACCTCTGGTACAATATCAAACCCACCAACATTCGAATTATAGGGGTCCCAGAAGAAGAAGAGAAAAATAAAGGGTATGAGAATATTTTTGAAGAGATTATAGTTGAAAATTTCCCAAACATGGAAAAGGAAACAGTCAAGTCCAAGAGGCACAAAGAGTCCCATACAGGATAAATCCAAGGAGAAACATGCCAAGGCACATGTTAATCAAACTAACAAAGACTAAACACAAATAAAGACTATTAAAAGCAACAAGGGAGAAGCAGCAAGTAACGTACAAGGGAAACCCCATACACTTAACAGCTGATCTTTCAGCAGAAACCCTGCAGACCAGAAGGGAATGGCAGGATATATTTAAAGTACTGAAAGGGAAAAATCTACAGGCAAGATTACTGTATCTATCAAGAATCTCATTCAAAACTGATGGAGAAGTCAAATGCTTTTCAGAGAAGCAAAAGTTAAGAGAATTCAGTACCACAAAACCAGCTTTACAACAAATGTTAAAGGGACATATATAGTCAAGAAATACAAGAGAAGAAAGAAGATCTACAAACTCATTCCCAAACAGTTAAGAAAATGGCAATAAGACATACATATCAATAATTATTTTAAATGTAAATGAATTAAATGTTCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAAACCCACTTCAGCCCTAAAGACACATATAGACTGAAAGTGAGAGGATGGAAAAATATGTTCCATGCAAATGAGAAGCAAAATAAAGCTGGAGTAGCAATCCTCATATCAGACAAAATAGACCTTAAAAGGAAGATTACAAGAGATAAGGAAGGTTACTACATAATGATCAAGGGATCAATCCATGAGGAAGACATAACAATTGTGAATATCTGTGTAACCCAACATGGGAGTACCTCAATACATAAGACAAATGCTAACAGACATAACAGGAGAAATTGACAGTAACACAATCATAGTATGAGACTTTAACCCCCTACTCACATCAATGGACAGGTAATCAAAACAAAATTAAGGAAGTACAAGTCTTAAATGATAAATTAGATGAGATGGATGTCATGGATATCTTCAGGACATGCCATCTGAATGCAGAAGAATACACCTTCTTCTTAAGTGCACACAGAATATTCTCCAGGATAGACCACATCTTGTGTCACAAATCAAACAGTAAATTTAAGAAAATTGAAATCATATCAAGCATTTTCTCTGAACACAATGCTATGAGGCTAGATATCAATTACAAGAAAAAAAAAAAACTCTCTAAGAAACACAAGCACATGGAGATTAAACAATACGTTTCTAAATAACCAACAGGTTACTGAAGAAATCAAAAGGGAAATCAAAAATTTCTAGAAACAAATAACAATGAAAACAACAACCCAAAACCTATGGGATGCAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCAATATAATCCCACCTCGAGAAACATTGAATAGATAACCTAACTTTACACCTAACACAACTGGACAAAGAAGAACAAGAAAATGCCCAAATTAGTAGAAGGAAAGAAATCATAAAGATCCGAGCAGAAATACATGAAAAAGAAATGAAAGGAACAATAGTAAAGATTAATAAAACTAAAAGCTGGTTGTTTGAGAAGATAAACAAAATTGACAAGCCTTTAGCTAGACTCATCAAGAAAAAAAGAATCAAATCAACAAAATTAGAAATGAAAAAGAGGTAACAGCAGAGGATGCAGAGATACAAAGGATTATAAGAGACTATTATGAATAACTATATGGCAATAAGATGGATAACTTAGAAGAAATGGACAGATCCTTAGAAAAGTTCAATCTTCCAAGACTGAACCAGGAAGAAATAGAAATTATGAACAACCCACTTATAAGTACTGAAATTACTGAAATTGAAGCTGTGATCAAAAATCTCTCAGAAAACAAAAGCCCAGGACCAGATGACTCCATGGAAGAATTCTTTTAACATTTACAGAAGAGCTAATGCCTATCCTTCTAAAATGCTTTAAAAAAATTACAGAGGAAGGAACACTTCCAAACTCATTCTATGAGGCCACCATCGCCCTGATACCAAAACCAGACAAAAACAACACAGAAAAGAAAACTACAGGCCAATATCACTGATAAACATAGATGCAAAAATCCTCAACAAAATTCCAGCAAACAGAATTC TCONS_00035693 r 5' 29777 TCONS_00035693 r 5' 16689 EMBV3_21015 ACAGCTTTATGCAGTGGTGATGACGTGGCCTTTAGTATGCCATCATGAGAGTTATTAGTG Gene GeneID:541248|RSF1:XM_002699063:78_cdna UTR3_Alt 2 NULL GeneID:541248 29 GENE RSF1 NULL remodeling and spacing factor 1 EMBV3_35519 AAGAGGTCCTTTCACTGAATATTTCCTGAGCATCGACATGGGCCAAGTGACGGGAGCTGA Gene BVV0102_263550 + 0 NULL GK000019.2:45935074-45973040 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094096 1 XLOC_057358 NonCoding TCONS_00094096 XLOC_057358 NonCoding NonCoding - 19:45969384-45971998 - TSS70460 2614 3 TCONS_00094096_12 174 0.117061973986228 1 0 0 5.35156629137547e-11 1.30317860358705e-11 0 0 3.77778925655686e-12 0 0 0 0 0 0 0 4.67879826125237e-05 0 0.000232380170207439 0 3.90525708967259e-10 0 0 0 1.6484123559652e-10 1.68800480853614e-10 0.000275776250200204 0 0 0 0 0 0 XM_002696084.3 WNT9B PREDICTED: Bos taurus wingless-type MMTV integration site family, member 9B (WNT9B), mRNA. 0.0 3757 100.00 0.796480489671002 NM_011719.4 Wnt9b Mus musculus wingless-type MMTV integration site 9B (Wnt9b), mRNA. 2e-27 129 77.78 0.0684774292272379 0 noncoding 0 0 0 0 0.084109302821439 0.557093070546395 -0.0100801424812452 0.844298882200635 CTGGATGGACAGAACAGGTGGTTGGTACGTGATGGCTCCCTCTGTGGTTCTCAAATGTGCTGAGACATAAAGCATTCAGAGTTCATGATTGTTGAGAAAGTAAATTCGGGGAAGCAAGAAGTAATCTTCAGGGCTGGTCTGTCTGTCTGTTGGCCAGCAGAGGACACCAGAGAAGCTGGGTTTATCCAAACCAGGGACAGACATGATGTGCCCACAAGAGCCAGCAACATGCATGAGTGAGGTGTGTGTGTTGAGGTGTACTTGGCAAACTAGGGAGCCCCCATGTATCCTGTCTAATAGGGCTCCCTCTCTCCAGTTGACGTGGGCAGGGTGGGAATGAAGGACCAGCATGCCCGTGCAGCTGATTTTACAAAAGAAGCCAGAAATCCAAAGGAAAACAAATCACTTGTAAAGGAAAAACACAGGGACTTCCCTGGCAGTCCAGTGGTTAAGACTCTGTGCTTCCAGTGGAGGGGGCAAGTGTTCAATCCCTGATGGGGGAACTAAGATCCCACAGGTTGTGCAGTGTGGCCAAAAAAAAGAAAAGAAAAACACAAACAAGAGCAAATAAAACTCATCTTTGGGCTGGGAGGGGCCCTCAGTACAGCCAAACCCTCTCAGGTGGTGTGGGCAAAGGGAGGGAGGGCCCAGTGGAGCCCCTGGAGTAGCCTCCACGGGGTCCTCAATTCTCCAGGCCCCTCAGGCAGTCCCAACCCCTGAGACACAGAAAATGCTGACATGCTGTCTAGATCGGTCCGGGTGTATCCAGACTTTGGGGCTCCCAGGTCCAGGATAGATCAGCTCCCGTCACTTGGCCCATGTCGATGCTCAGGAAATATTCAGTGAAAGGACCTCTTCAGTGTGACTTCGAGCACAGCCCTCCACCTCTCAGCAGCATATGCAAAATGGGTCGTGATGTGGCCGCGCCTACCTCATAGGGAGAGTGGGGAATCGAGGGAGACTAGAGGGACCAAAGTCGTTCCGGAGATCAAAAGTGCTTTACAAATGCCAAGTGTGGTCATCCTTGTTATCATTATTATCATAAGCAGGACAGTTTTTCCAGAGCAGAAGCAGAGGCCTGGGACCCGGAAGAGCCGAGAATATACAACGACTTCACAAGGAGGATCGGATGAAGCCCGTCGGAGTTTGTGCTCAGAGAAGATGCTGCTCACCAGCTCCAGGACAGAGCCACCCAAGGGACATGGAGTCCACCAGATCTCTTCCCTGGCCACCTGGTGTCCAGTTCGTGGGGACCCCAATCACGCCAGCTGTATTTCCCCAGATATACACAGGCTTCCAGCAGAATACACAACCCCCACAGATGCTGCCCATAAAATATAGAAACTATATAAATAACATAAATATTTTCTCATATATATCTTAGCTATATAAATTATTTTCTTTTGCCCTAAAAACTCTATATATATGCGAGGTAGACAAAAAATACCCTGTGAATGTTTCCCTTAATGCTATAGAATGAGTGGTCAGTGGCCACTGGTCCCAGGGGCCCCAGTTGGGCTGAGATGGACCTTTGGGGGCAATTGGAAGAGAAAGGGGTGGGAGCAGGGGAGGAAGAGAGGAGAGACAGCTGGACAGCGAGGACCTGAGAGGCCGAGGGGCCCTGAACCGCATCATCCTGGGCTGGGTCAGTGTTACTGGCCGGCCGTGGCCTCAGTCCCTCAGAGTCTACCCTTTATCTTCCTGCCACCCCTGCACTGCTGGCCATGGGCCTGGGGTGCGAATGGCATTTCGGAGAATCAGGCTCCCCCTTCCTGCTGCCTCATGCCTCAGGGTGAGCCATGGCAGAGGCAGAGCTTGGGTCTCATAAGGATGGATTGGGCAGGCAGAAAGAAAGTCTTCATGCAATGGAGGCATGGAGGGAACTCGGGAGACAGCCCTTTCTCCTTCTTCTCTTCCTGCCAAGATGTGGGCCTGCTGCTCGGGTCAGCAAAGTCACTCTCGGGAGGGGTCTCAGGTCAGTAGGGCTTTTCATCAGAGCCTCTGCAGCCAAAGTCCTTCCAGCATCCCTCAGGAGGCTGCATGATCCACCGAAGACAGGGCAGGGTCTCCTTGCCCTCAGAGATCACAGGGAGCCCCCAGGAGCTGCTTCCTGGGGCTTGCACAGACGGTTTCTCAGCACTCGGCTGATTCTGAAGTTTCCTGTCCCGGCAAAGGGTCAGCAACTCTGGGTTCAGGGAGAAAGGAAGCTGACAGAGGGCGCGGCAGGGCCAGCAGAGCAGCCAAGGGCGTCCCGAAGGAGGTCACTTCCTCCCGGCTGGCATCAGGCCCTGCTCTGGGAAAGCACATGGCTTCCAGCAAAGTGACCCCTGCAAGGTCTGCATCCTGATCCAGAGAGGTGTGTGCTGCTGAATGAGAGCCCTCAGCCTGGCAGGTCCCAGGGGCGTGCCTGCATGTTGGAATGGGGAGGCCTGTGTGTACCCATGGGTAGTACCAGCTCCTCTCGCCTCCCTCCCAGGGCCTTAGTAGGTAGCCCTGGAAATGTCCACAGTATCAGAAGGAATTAGCAGCCACTTCTCTTCCTCAGGTAAAAGCCAAGGTGGAGGGCCCTTAGTAAATGAAAGGGGCCCCCAAAGAGCCCAGCTTAGCAAACACT TCONS_00097343 TCONS_00097344 TCONS_00097345 r 3' 1043 TCONS_00097343 TCONS_00097344 TCONS_00097345 r 3' 3656 EMBV3_17777 TGCAGTCCAAGCCATCAATGAAGCCAATCTCACCTCAGAGGTTTCTAACATCGCACAAGC Gene GeneID:784768|LOC784768:XM_002686282:128_cdna Constitutive 0 NULL GeneID:784768 3 GENE LOC784768 NULL similar to calcium-activated chloride channel EMBV3_39090 TCCCGTGCGAGCCATCAGCAGAGCGGCCACGAGGCGCTCTGTCTCTTCCTTTCCAGTTCC Variant GeneID:509587|ATG16L1:XM_002686560:52_cdna 943^999 3 EMBV3_35217 GeneID:509587 3 GENE ATG16L1 NULL ATG16 autophagy related 16-like 1 (S. cerevisiae) EMBV3_24365 ACTTTGGGAGAATGCGTGGAGGGAAAAAGTAGTCAATGAAATCAGATTAAGCATGTGATT Gene GeneID:539938|TAF8:NM_001101200:329_cdna Constitutive 0 NULL GeneID:539938 23 GENE TAF8 NULL TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa EMBV3_23461 CCCCACTCTATGGATAGCAACCTGTCACATTTCAAGGCTCAAACCTTATCCTCATCTCCC Gene GeneID:614766|RPRD2:XM_002686048:259_cdna UTR3_Alt 3 NULL GeneID:614766 3 GENE RPRD2 NULL Regulation of nuclear pre-mRNA domain containing 2 EMBV3_21918 CTGAGCTGTTTCCTGGGCAACGTGTATGCTGAGAGTGTGGATGTTCTCCGGGATGGAACT Gene GeneID:100125939|LOC100125939:NM_001105502:2_cdna Constitutive 0 NULL GeneID:100125939 18 GENE LOC100125939 MGC159405 hypothetical protein LOC100125939 EMBV3_36423 CATTGCTGGTGGACTCCTCTTTTTGGTCGTCACAGGGGCTGGTATGGTGCTGATGAAAGA Gene GeneID:100336674|LOC100336674:XM_002691174:272_cdna Constitutive 0 NULL GeneID:100336674 11 GENE LOC100336674 NULL Solute carrier family 10 (sodium/bile acid cotransporter family), member 6-like EMBV3_00584 AGCCAGTTACCCGTCTCCCTGTCTCCAGCCCTGTGACTGTCCATCACTGTCTACACTGCA Gene BVT0102_409718 + 0 NULL GK000010.2:1191449-1467375 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015637 TCONS_00015642 TCONS_00015641 TCONS_00015644 TCONS_00012299 TCONS_00015640 TCONS_00015645 2 XLOC_008529 XLOC_007836 Coding TCONS_00012299 XLOC_007836 Coding Coding EPB41L4A 10:1443638-1587766 j TSS9367 469 2 TCONS_00012299_2 67 0.147121535181237 3 0.996766740444192 0.0171199966936438 0.0131794547312923 0.0122539077397909 0.00711800951821667 0.00937440951783144 0.00198243555910413 0.00596269389559559 0.00771366269593093 0.00614978546005965 0.00090163078233702 0.00100193734311356 0.000116367154780434 0.00100797875725921 0.0017883267899491 0.00232672026441974 0.0111005327371541 0.0100339901522821 4.6899800385483e-19 0.0070238390877362 0.00937787451763115 0.00548805663092274 0.000241510002349984 0.00339005487060344 0.00217489925550369 0.0192937569434346 0.0130172684331885 0.014211384291128 0.000924934867053053 0.000213966548898331 0.000215854612259421 XM_005211191.1 EPB41L4A PREDICTED: Bos taurus erythrocyte membrane protein band 4.1 like 4A (EPB41L4A), transcript variant X1, mRNA. 0.0 643 100.00 0.756929637526652 NM_022140.3 EPB41L4A Homo sapiens erythrocyte membrane protein band 4.1 like 4A (EPB41L4A), mRNA. 1e-97 360 83.48 0.720682302771855 TCONS_00012299_2 sp|P52963|E41LA_MOUSE E41LA_MOUSE Band 4.1-like protein 4A; 4e-40 140 91.04 0.985074626865672 1 noncoding 1 1 0 0 -0.505019673360103 0.0514279493082146 -0.165152381339247 0.0941276673944706 CTGGGGAGTGGAAAGTGATGAAGATAGATGTAGTGCTTCAGAAGGATGCTCTGGCTGCAGTGTAGACAGTGATGGACAGTCACAGGGCTGGAGACAGGGAGACGGGTAACTGGCTTCCGTCCGCGCCGCTCCGGACCCCGCCGGTGACTGGTGCTTTCGGCCTCGCTGCGGTGCCGACAGTCCGTTCATGCCTCGCGTTTGAGGGCAGGGGGTGGCTCAGCGGCTGGCTCGCAGCTTTCTCCGCTGGCTGAGGCCCGCCACAGCCGACATGGGCTGTTTCTGCGCGGTTCCGGAAGAATTCTATTGCGAAGTTTTGCTTCTGAATGAATCCAAGTTAACTCTCACCACCCAGCAACAGGGCATCAAGAAGTCAACGAAAGGCTCCATTGTCCTTGAGCACGTATTCCGCCACGTCAACCTTGTGGAGGTGGAGTATTTTGGGCTGCGTTACTGTGACAGAAGCCATCAG EMBV3_16743 ATCAAAGCTGATGCACAAGTCTTACATAGAGGTCACTGAGGAGGGCACAGAGGCCACCGC Gene GeneID:513568|SERPINB7:XM_002683804:26_cdna Constitutive 0 NULL GeneID:513568 24 GENE SERPINB7 NULL serpin peptidase inhibitor, clade B (ovalbumin), member 7 EMBV3_43507 CAGGAGCATGCCCAGAGATGTGGAGAGCCCCAAGATCTGACGATGAATGGTTTAGGAAAT Gene GeneID:526903|ZBTB1:XM_002691065:499_cdna Constitutive 0 NULL GeneID:526903 10 GENE ZBTB1 NULL zinc finger and BTB domain containing 1 EMBV3_36991 AAGTCATCCTTTTGTGTGACTTTGAAGTGGTCTTGCCTGCACCCTGCCCCGCCTATTCAG Gene GeneID:534937|UPP2:NM_001076043:118_cdna UTR3_Alt 3 NULL GeneID:534937 2 GENE UPP2 MGC140537 uridine phosphorylase 2 EMBV3_20569 CACATCGAGCAGCAGATCCAGACCTACCAGCGCAGTTGGCTAAAGGTGACTGACTACATT Gene GeneID:505568|EXOC7:NM_001034250:350_cdna Constitutive 1 NULL GeneID:505568 19 GENE EXOC7 MGC128131 exocyst complex component 7 EMBV3_38995 GAAGTCGGACACTGACAGCAACTCCTCGTTTCACTCTGGGAGCTATGGCAACTCGCGTAA Gene BVT0102_308895 + 0 NULL GK000011.2:102790297-102813440 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034227 1 XLOC_020460 NonCoding TCONS_00034227 XLOC_020460 NonCoding NonCoding - 11:102792725-102797584 - TSS25226 4859 4 TCONS_00034227_7 88 0.150236674212801 1 0 5.60019651465031e-06 8.27201823138831e-06 1.90450706125842e-06 1.70903055115858e-06 1.21930772511379e-05 7.36173569745044e-07 0 0 4.05954374016491e-06 5.50405572492762e-06 2.63828664414766e-05 2.57561340251491e-05 2.71633997614995e-05 3.87240048599598e-06 2.01942992648676e-05 0.00210418280584466 0.00215259185463393 0.00139938951530636 0 0 1.87429168317759e-06 0.00126910326273501 0.000653266950412064 0.000859104644721422 5.70363329931259e-06 2.60996418635527e-05 0 0.000407711363464536 0.000261263304175952 0.000511022655410035 NM_001101133.1 FAM26D Bos taurus family with sequence similarity 26, member D (FAM26D), 2e-94 352 85.22 0.0644165466145297 0 noncoding 0 0 0 0 0.024356505325508 0.906731240701519 0.0659355254436071 0.237270650646224 AAGGGAAGTCGCTCAGTCATGTCTGACTCTTCTCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGGACTGGAGTGGGGTGCCATTGCCTTCTCCATAGTGTGCTTAGTTTCACTTATTTTTTTGGTCCTTGGACTGCAAGATCAAACCAGTCAATCTTAAAGGAAATCAATTCTGAATATTCATTAGAAGGACTGATGCTGAAGCTCCAATACTTTGGCCACTTGATGTGAAGAGCTGATTCATTGGAAAAGACCTTGATGCTGGGAAAGACTGAAGGCAGGAGGAGACGGGGACAAGAGGACAAGGTGGCTGGCATCCCTGACTCAGTGGACATGAGTGTGAGCAGCTCCGGGAGACGGTGAAGGACAGGGAGGCCTGGCATGCCGCAGTCCACGGGGTCCCAAAGGGTCGGACATGACTGAGGGACTGAGCAACAGCAACAAATCAGAGTTAGTACTTGCTTTGTTATTATTGCAGAACTTTGTGGTGCTGCCATTTAAAACATACATTAAGTTTTTATTGAAATCTATTGTGCATTTGGGGGGAAATTTTGACTCTTAGGAGTGAACTTAAAAAGGGTTGCCTGAGTTATTCTGTATATCTGTAGGGGTAAACTTGGCAACAATTTTACTGGAAAGGGGCTTCTCTGTACAGGGGCTCTGCCCAATGGCATTCTTAAGACTTTGAAGTCCAGCTAACACCTCCCTCAGCCTAAACTTCTGCACACTGAGTCAGGAGTTCTCCCCTGTTTCCTCACCCCTCCCCTCTTCCATGGAGGTTAATCCATTGACCTGTGAGGATGAGAGGTGACTGTGAGTTAATGGCAGCGTCACAGACACAGTACCCTTCTGAATGTCCTAAACGTCAGCTCACATGGCGACAGTGCTGAGCATTGAAGCCCTGGAAGAGTGGGCAGGACACCGGGAGTCTTCAGACTGGCCGCCTCTCCTGGTTTACATGTACCGTACGCTCTCTTCCATCCTGAAATGTCCCTGGCCTGGGTGGTGTGTTTCAAGTTAGTTTCAGCTGTCACTGCTCTGTAGGCTCTATAGCTCTATAGGCATGGATGCAGTGGCAGTGATGCCGCTGCTCTGTGTGACGGTGCAGGAGCAAAGGTCCTCCACGACTGGACCTTTGAAGCCAAGGCAGCACTGCATCTTGGGAACCTGATCCACACCTGTGTCACATCTTCCCTGCTTAAGGTTAATTTGTTCCCATTATCCTAGATAAGAAATTGGTAGCTTGTTAGGCTTGATATTCATTCTGAAATCCTCCTGTGTCCACGACCCAGACTTCAAGCCATCTCTGCCTGTTATCATATCTGCCAAAACTACCAATTATTTTTCAATGTCAGAAGTTATTAGAAGCACTGGTGAAGCTCGTGGTGGAGTGTGACATTTTTCTGCTTCTTCGTCTAGGAAGTTTTTGAGAATGTTAATGTTGGGCATCGGGACTAGAGCTGTTAGCAGCCATCACCAGTTAATTAGGTTAAAAGAATGTCAAGGGGTAATAATTAAATATTAAAATATGTTCTGTTGTAATTGTGATGGTGTGAGCTAAGAAACAGAAGAAATCAAGGCTCATGGGTCTTGTCAGGAAGAATACGGAGCTGCATTTATGGAGTCCCCGCTCCCTGGGCAGCGCTGAACCGTGTTACGCGAGTTGCCATAGCTCCCAGAGTGAAACGAGGAGTTGCTGTCAGTGTCCGACTTCCACAGGCCCGCCCGTCTGTCTATCCCCGCTGCTCCTGACCCCTCTCTGCCTCGCTCCTCCTCCTAGGAGAGGCCCTCTCTATTTCCCTCCCTTTCCTTCTCTCAGCCTTAGGACACCCTCTGAGCTATCAGTCTGATAGAAAATTAGGTTTGTGATAAAATTTCTAAAAACTACATTCCTAGAAGGCTTCCCTTCCTATAAGGAACTATTAAACAGTAGTTTTTCTTGCTGAAGGTAATATAATAGTGTTAGCTGTTAAGAGCTCAATAAACTGTATCTGATTTTTTCCTCAAAGTCTCCCTGTTGGAGTGCCCCGCACCTCCAAACTGGATTTCAGGCAGAATGGACTGCATTTCTGCTCCCTGCCACACCCGCTCTGCTTCTCACACCAGTAAGTCCTGACAAGCAAAAATTCAGGTTATATTCCAGGTCAGCAGGCCTCAAATTTTTAAATGAAAGTAGGTTTTGCACCCCCCCCCCTTTTTTTTCATTTTAGAGATTGGACAGCACAGACAGCAAATACCCAGATAGATAATGCATTTCTTTATGCTAGCTTGCCATGGGCTGTGGAGCGTGAACACCTCCGTGCACTCTCCCACTGCTCCCGTGTGGGTGGAGCTCGGCAGGGCTGGTCACCACACAGTGGCTTGAGCATCTAGCCTCCCCCTCGACACTGTTGGACTGTTAGAATGCCTCTAACGGAGCTCAAGTGAGGCGCTTGCACTTCGGCTCTTAGTAGAAGCATCACCTGACAGTTGAAAGCAGAGTTTTGGGCCATGTCTCAAGTCTTATAGGTATTGAGCTTTGCACTGCTCTTTCTTGACCCTAAAAGCAGTTTTTGGAGCTAAGATCTTCATGTCTGTTGTTCAAACTGATGTTAGAGTGTGTGCAATTTGACTGTCGTATTGAATTAGGGCTTCCCTGGTGGTTCAGTCAGTAAAGAATCTGCCTGCAATGCAGGAGACTTGGGTTCGATCCCCGGGTTGGGAAGATCCCCGGTTGGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCTGCATGGACAGAGGAGCCTGGCAGGCTGCAGTCCATGGGGTCGAAGAGTTGGACATGACTGAGCAACTAAGCACGGCGCATATTGAATTAAGTCACATTTGCAGAGTTGCTTCTAATGACCACTCACCACAGCATCACAGTCCTGGTATAGAGCTGGGTTTTTCAGAAGATGAAGACTAGTTTCCGAGGCACGACACACATCAGCATCAGGACTGGCTGGCTGGCCTGAGTCTGGTAAGCAGGGTGCAGCCTCCCATTGGCATGTGTGGTGTTTTATGATGGCTGTTTCTGAAAACCTGCTGTGGAATCAGTAAGTTTTAACAGGGAAGTGACTGTTTATAAATATACATGTCCTATAAAGAAGTTTAGTCCTTTTGGTATATGCATATTTAACATCCACCCCGCCACCCCCCACAGCCTCTTTGATTAGGTGATTCAACTTTTCTTGTCTTGCTTTTTTTAGGTTGTAACTATACTCTGGGGAGAGACTTAGTATAGGGTCTGATCCTAGGCAGTGAGCTTACTTAGCACAGTGTTAGTGGCTTCCCTGCATGGTGTTCATCCCTTCATTCCAGGCTTGGGAGGGGCTGCAAAGCAGGGAGTGATGGCACTTTCATCCTGATACGAGAAAGTGAAGGTGCGGGCTCTCTAGTGGAAATACTGTTAATGAGTTGGCTGGAATTGAATTTCAAAACTCTAAATCTTGTAAATTTTTCTAAGGTAAAAACTTGACTACGTCACTATCATGAGATCCTGTTAGTTTCATAAAAAGGTCCCATGAAGTGGTTTCATTGGATGGTGTAAGAGGTGGTGGCTTTGAAGCATTTTGTATTTTATCAGTTTGACATTTGGCTAATGGATTGGTGAGGTCAAGGGTGTTTTGTTTTTGGTACTAATGCAAAAGTAAATGCAAAAATGAATTATGACTTTTTAAAGACTTTAACACAGATTTGTTTGAAAGGAAAGTGAGTATCAAACTTGGGAATACAGAAATAAGACTATAGGAAAATAAGCCCATGTTGTGTATAGTGGCATATATTCTATGTTTATCCTATGCCTGTGCTATCTTTGTGCTTGGCTTCAAACTACGTGTTTGTTTACATGCAATCTTTTTTGAAATAAAAAGAACAGGCATCCAAAAACTTGGGTTATAGAAAGGGGACTTTTTAAAATTCTTACCATCTGATTAGGTGGTATGTTTTAGACTTTTAGTATGTAAGTAAAACAGCCTTGAGACTAAATAGCACATTTTGCTTGGAATACCCCATCCAGAGGAATCCACTGCTTCTCTGCACTGTACATATGTACATAGTGTCCACGATTAGATTGTAAGCTCCTCGAGGGCAGGAACTGTCGTCTTGTCTTGGGAGTTCCTGCAGTGCCGAGTGTGAAGTGCCTTGCACAGCGTAGGTGCTGGTGACACAGAGAAGGAGTGAGTAGCTTCCTGCCACCTTTATGACGAAGCTTGGTTTACTTTCTCCGCTGTGTTGAGAACTGCAAAGTACTAATGATGGGAAGAGGGCAAAATTCTTTCTTGGATTTCAGCTGGGTCTCCTGAGCTGAAGCAGACCATGCTGTCTCCTTGGCACTAGTTATCTTCTTGCCCTGAAGACATACTAGTGTCCTGAGCTTTTATATGATAAAAGGGCGGCAGTCTCTGGGCAAAGTTTGAAGTGGGAAAGATTATAGAGAAAATGAAGTGGAAATTTTGGAGGGTGTTCATCAAATGCAGTCCTGTGGGGCAATCTTACTTTAGTTATTACTAAAGGAAAGGATAGCAATTCTCTTTCTTTACCAGTTAGCTGGTTGGCCAATTTTCCAGTTAACAAAAGATTGTTGGGTTTTTTTTTTAAACTTTTTCCCATTTTGCATTCCCCCCTCAATTGCTCTTTATGATTCTAGTACTTAGAGTCTATTAAAGTTGCTGTGAATATCCAGTGCTGTACATAATGGCAGTTTTGTAAATGTGAAATAACCTCAATTATGTTGTGTTTTGTATGCAGAGCCACTAGTATTGTTATCTTGGCCACTTTTTTTATTCAAAATAAATAAAATAATCAAGTTATTTGT TCONS_00026381 TCONS_00026382 . 3' 415 TCONS_00026381 TCONS_00026382 . 3' 5273 EMBV3_13525 AGCCTCACCCTGCAAGAAATAATCAGTGGTGTCCTGCCCAGGCTGGTTGAGCTTATGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43085 ACCGTCTGAAGGCATTTTCTCGTTTGGTTTTGGTTTTCTCCTCACATCCCCAGGTGAAGC Gene BVV0102_323154 + 0 NULL GK000016.2:45769990-45886756 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067354 TCONS_00067344 TCONS_00067343 TCONS_00067350 TCONS_00067352 TCONS_00067345 TCONS_00067355 1 XLOC_041419 Coding TCONS_00067352 XLOC_041419 Coding Coding RERE 16:45518514-45882270 j TSS50668 7492 1 TCONS_00067352_10 1545 23 0.979466948907919 2.02719839703764e-08 0.000258418742811069 0.00020255910037342 3.24972587273727e-15 7.52918782033494e-13 0.000236932917238882 2.07476167351054e-08 9.65257865374259e-05 2.76264147803101e-05 3.54654828529834e-36 6.22823130511282e-16 2.62645204641927e-13 3.59401101619591e-09 1.34298046453749e-06 7.90052651008052e-05 0.000234339002861867 1.31657354143858e-08 3.30638154119328e-07 0.000190051403160615 0.000197238598584276 0.000115298481474873 7.8996695326562e-16 3.90196055172771e-45 7.62048969025161e-05 0.000113319192024146 0.000480697160014552 0.000167869933781629 6.2112938372684e-15 1.46867110620289e-05 1.45385075390197e-41 XM_002694049.2 RERE PREDICTED: Bos taurus arginine-glutamic acid dipeptide (RE) repeats (RERE), transcript variant X1, mRNA. 0.0 1.336e+04 100.00 0.988654564869194 NM_012102.3 RERE Homo sapiens arginine-glutamic acid dipeptide (RE) repeats (RERE), 0.0 7405 87.70 0.772557394554191 TCONS_00067352_10 sp|Q9P2R6|RERE_HUMAN RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein; 0.0 2440 94.41 0.981229773462783 0 coding 0 0 1 0 0.104200639497202 0.454993354893519 -0.0065500133565416 0.901904722427275 TTTAAAATCTTTTAAAAATCCATCAAACAAAAGGTAAATTTCCTTTAATCTCAATGAAATACCAACATTCACCCTGAAATATTAGCATTTTTGAAACGTTGGGGTTGTTGGAGTGGTTGGATTTTCCCTGGAATTGAGTGAGAAATTCAGAAGACTGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCCAGCCGTGAGAGGACAGAAGAAGGCACGTGGCGAATCATGACAGCTGACAAAGACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGATCGGGACCGGGAGAGAGAGAAGCGAGACAAAGTGCGTGAGAGTGAGAACTCGAGGCCCCGCAGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTACGCCGAGAGTGATCACAGTGAAGACGAGGACAATGACAACAACAGTGCCACCACGGAGGAGTCCACGAAGAAGAACAAAAAGAAGCCCCCGAAAAAAAAATCTCGTTACGAAAGGACAGATACCGGCGAGATAACATCATACATCACGGAGGACGATGTCGTCTATAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCCAACACACCGTACTTCATCTGTAGCATCCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTGACCCCCCAGCATGCTCTCTGCCGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGCGAGGGCCTGTAGGGAGTAAGAGGGACCATCTACTCATGAACGTCAAATGGTACTACCGTCAGTCTGAAGTCCCAGATTCTGTGTACCAGCATTTGGTTCAGGATCGACATAATGAAAATGATTCTGGAAGAGAACTTGTCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCCGATTACGTTGACACTTACCATGCCGCTGCCCTCAGAGGGAAGTGTAACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAGGCCCGAGTGGATTCATTCTTCTACATACTAGGCTACAACCCTGAGACAAGGAGGCTGAACAGTACCCAGGGAGAAATTCGTGTTGGTCCTAGCCATCAGGCCAAACTGCCCGACTTGCAACCATTCCCTTCTCCCGATGGAGACACTGTGACCCAGCATGAGGAACTGGTCTGGATGCCTGGCGTTAATGACTGTGACCTCCTCATGTACTTGAGGGCAGCAAGGAGCATGGCGGCCTTCGCTGGGATGTGTGACGGAGGCTCCACAGAAGATGGCTGTGTGGCGGCCTCGCGGGATGACACCACCCTCAACGCACTAAATACGCTCCATGAAAGTGGCTATGATGCTGGCAAAGCTCTGCAGCGGCTGGTGAAGAAGCCTGTGCCCAAGCTGATTGAGAAGAGCTGGACCGAGGACGAAGTGAAACGCTTCGTTAAGGGGCTTAGGCAGTACGGCAAGAACTTCTTCAGAATTAGAAAGGAGCTGCTTCCCAATAAGGAAACAGGAGAACTGATCACCTTCTATTACTACTGGAAGAAAACCCCAGAAGCAGCCAGCTCCCGGGCCCACCGCAGGCACCGCAGGCAGGCCGTGTTCCGGAGGATCAAGACCCGCACTGCGTCCACGCCCGTCAACACGCCCTCCAGACCCCCATCCAGTGAATTCTTGGACCTGAGTTCAGCCAGTGAGGATGACTTCGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGCTACGCCTGCCGCCACTGCTTCACCACCACCTCCAAGGACTGGCACCACGGGGGCCGGGAGAACATCCTGCTGTGCACAGACTGCCGCATCCACTTCAAGAAGTACGGCGAGCTGCCCCCCATCGAGAAGCCCGTGGACCCCCCACCCTTTATGTTCAAGCCCGTCAAAGAGGAGGACGATGGGCTCAGCGGGAAGCATAGCATGAGGACGCGGCGGAGTCGTGGCTCGATGTCTACACTGCGCAGCGGTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGTGCCTCGCCCATCAATGAAGACATCCGCTCCAGCGGCCGGAACTCTCCCAGCGCGGCCAGCACCTCCAGCAACGACAGTAAAGCAGAGACGGTGAAGAAGTCAGCCAAGAAGGTGAAGGAGGAAGCCACATCCCCTCTTAAGAGCACCAAGCGCCAGCGGGAGAAGGGGACCTCGGATACAGAAGAGGCCGACAGGACCAGCTCCAAGAAGACAAAAACCCAGGAGATCAGCCGGCCCAACTCGCCATCTGAAGGCGAGGGGGAGAGCTCGGACAGCCGCAGCGTCAACGATGAGGGCAGCAGTGACCCCAAAGACATTGACCAGGACAATCGCAGCACGTCCCCCAGCATCCCCAGCCCCCAGGACAACGAAAGTGACTCGGACTCCTCGGCCCAGCAGACGACGCAGCCCTCTGCCCTGCAGGCTCCTGGAGGGGCTACTCCAGCTCCCTCCTCTGCCCTGCCAGGGACTGCCCAGTTGCCCACCCAGGGGCCCACACCTGCCCCCGCGGGCCCCTCACAGGGCTCCCCCTCGGCCTCCCAGCCCCCCACCCAGCCGCAAGCCCCCTCAGCTGCTGCTCCCCATGCCCACATCCAGCAGGCGCCCGCTCTCCACCCACAGCGGCTGGCCTCACCGCACCCCCCGCTGCAGCCACTGACGGGCCCAGCTGGCCAGACCACCGGCCCACCCCACACCCAGCCCCCTCTGCACAGTCAGGGCCCGCCCGGCCCTCATGGCCTCCAGGCTGGGTCCCTACTGCAGCACCCGGGGCCCCCACAGCCCTTTGGCCTCCCTCCCCAGGTGTCCCAGGCAGCAGCCCACCCTCACACCTCCCTGCAGCCCCCTGCCCCTCAGTCGGCCTTGCAGCCTCAGCAGCCCCCGCGGGAGCAGCCCCTGCCCCCAGCACCTCTGGCCATGCCCCACATCAAGCCCCCGCCCACCACGCCCATCCCCCAGCTGCCAGCGCCCCAGGCCCACAAGCACCCCCCTCACCTCTCGGGGCCCTCTCCTTTCTCCATGAATGCCAACCTCCCACCCCCTCCTGCTCTGAAGCCCCTGAGCTCCCTGTCCACTCACCACCCACCCTCAGCCCACCCCCCGCCCCTGCAGCTCATGCCACAGAGCCAGCCACTGCCCTCGTCCCCTGCACAGCCCCCTGTGCTGACTCAGAGCCAGGGCCTGCCCCCTGCTGCTACCTCCCACCCCGCCACGGGCCTCCACCAGGTGCCCCCTCAGCCCCCGTTTGCACAACACCCCTTTGTCCCTGGGGGCCCCCCTCCCATCACCCCTCCGACTTGCCCCTCCACCTCTACTCCTCCGGCGGGATCTGGCCCCTCGGCCCAGCCACCCTGCTCTGCTGCTGTTTCTTCGGGAGGCAGCGTACCTGGGGGGGCAACCTGCCCACTCCCCACCGTCCAGATCAAGGAAGAGGCTCTGGACGATGCTGAGGAGCCTGAGAGCCCCCCTCCCCCACCTCGGAGCCCGTCCCCTGAGCCCACTGTGGTGGACACCCCCAGCCACGCCAGCCAGTCTGCCAGGTTCTACAAACACCTGGACCGGGGCTACAACTCGTGTGCACGGACCGACCTGTACTTCATGCCTCTGGCGGGATCCAAACTGGCCAAGAAGAGGGAGGAGGCCATCGAGAAGGCCAAACGGGAGGCCGAGCAGAAGGCGCGAGAGGAGCGGGAGCGGGAGAAGGAGAAGGAGAAGGAGCGAGAACGCGAGCGGGAACGGGAGCGCGAGGCTGAGCGAGCGGCCAAGGCGTCCAGCTCGGCACATGAAGGCCGCCTCAGCGACCCCCAGCTTGGCGGTCCTGGCCACATGCGGCCATCCTTCGAGCCCCCGCCCACCACCATTGCGGCCGTGCCCCCCTACATCGGACCCGACACGCCGGCCCTCCGGACTCTGAGCGAGTACGCCCGGCCCCATGTCATGTCACCCACCAACCGCAACCACCCCTTCTACGTGCCCCTCAACCCCACCGACCCGCTGCTGGCCTACCACATGCCCGGCCTCTACAACGTTGACCCCACCATCCGTGAGCGGGAGCTGCGGGAGCGCGAGATCCGAGAGCGGGAGCTCCGGGAGCGGGAGCTACGGGAGCGGATGAAGCCGGGCTTCGAGGTGAAGCCCCCGGAGCTGGATCCCCTGCACCCAGCCGCCAACCCCATGGAGCACTTTGCCCGGCACGGTGCCCTCACCATCCCCCCTGCCGCCGGCCCCCACCCTTTTGCATCTTTCCATCCCGGTCTGAACCCCCTGGAAAGGGAGAGACTGGCCCTGGCCGGGCCCCAGCTGCGGCCTGAGATGAGCTACCCAGACAGACTGGCGGCTGAGCGCATCCATGCCGAGCGCATGGCCTCGCTGACCAGCGACCCCCTGGCCCGGCTGCAGATGTTCAACGTGACCCCGCACCACCACCAGCACTCCCACATCCACTCGCACCTGCACCTCCACCAGCAGGACCCCCTCCACCAAGGTTCAGCGGGCCCCGTTCACCCGCTGGTCGACCCCCTGACCGCTGGCCCTCATCTGGCGCGCTTTCCCTACCCCCCTGGCACCCTCCCCAACCCTCTGCTTGGACAGCCCCCCCATGAGCACGAGATGCTCCGTCACCCAGTTTTTGGCACCCCCTACCCCCGAGACCTGCCTGGGGCCATCCCACCCCCCATGTCGGCAGCCCACCAGCTGCAGGCCATGCACGCCCAGTCGGCTGAGCTGCAGAGACTGGCCATGGAGCAGCAGTGGCTGCACGGACACCCCCACATGCATGGTGGCCACCTGCCCAGTCAGGAGGATTATTACAGTCGACTGAAGAAAGAAGGTGACAAGCAGTTATAAGTTATTTATTTGTTAACGCTGGCTGTGGAAACCCCAATTCTTGGGGGAGAGAAACAGGACTTTTTACATACAATAGGAGCTCTAAAAGCAAAAAGAATATCTTCTAAAGATTTCTTTATATATTTAAAAACCCCACAACTAAAAACGTATCAGCATACATAGTGTTCGTTTGTAGAGAGGATTCCTTGAGACTGGTTTGGGTCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACACCCAGAAAGTGCCCCTGCAGTCTTGGGGTTTGGCTTTAGCTTTCTTTTCCTTCCTTGATTTTTCTCAGTAGGTGCTAGATCCCAGTTCACACCCTTCAGTGCGTGCAGACACACTCAGTTGCGTGTGTCCCAGAACCCACACGGTCTGCAGCATCTGAGTTTGGAATCCAAGAGCTATAATTTTTAAAAAATCTTTTATTTTAATACATTGTAGGAGATCTTCATAATTTGAGGAGGTTCTGTGCATGGCTTTTTACGTCTGTAAATAAATAATTTTAGAACAGCCTTTTTTTTTTCCTTCCATGAACTACTATTCTGATCTATTTTTTCCAGCCATGTCACTAATTGTGAATTCCTACCAGCTATTGACAGAATACAGAGTTGATTTTTTAATAAAAAGTTATATATAATTATCCCTTTAATTAAAGGGAACAGATGGGCGTTACTAGTTACAAAGGGGCAGAGGAGGCTAGGGGCTAGGTTTGGGAGCAGCCAGGGATTGCAGAGACAACATTACAAGCCGTTTCTTTGTGTTGCTGCTTTGGTTCTCACTCCTGTCTGTTCCCGGCTCCTGCTTTGCCAGCGGTGCGGACTGTGGTGAGCTCAGCCGACTCGCTGTGCACTGGGAGCGCAGGAGTTGAGTGTCCCCCGTTCCGTCTCTGCAGGCGCGAAAGCACATGTTCCTGTGTGTCTGGTTGTAGATTTCCTTGTAGATTTCTGTACACGCGCATTTGATTGGTCTGGATGAACTTCTCCTCCCCCCCCCCCATATTTGGACTATTTCATAAACATCCTAGAAAATTGAAGAAAACAATTCTCACTAAGCATGTGTGCTTGCCAAAGGATCTGTCAGAAGCCTGCTTTCTGGTGTGTGTGGTCATTCGGATCTCCTTGTGGGGAGGCCGGGCCGTCCTTGCCCCACTCAGAGGCTGCTTTGGGGTCGGGGCCTCCAGGAGGTGTCCCAGCTGTGGGTGGCAGTCCTGGCGGGTCCTCGTATCACCACACTTGGTGTCCCGCTCTGCCTCACAGAAGCAGGACAGGGGTCGCGGACGTAAGGTGGGAGGCAGGCTCCACATGGGGCCCCTCCGAGGGGACAGTAAGCCCTGAGCCTGCCTCTGCTCTCCAAGGTGCCCACGTGATGCCCTTTCTCCAGAACAGAGGGTGAGGACTCGGGGGGCCGTTATGCACCTGTTGATGAAACTTTTCTGCCAGGATGTGCCCTTGTCTATCCCTCTTGTCTCAGACCCTTGAGGGCCTTTCCTGCCATGATGTGCAGGGGTCCCAGCCAAGAGCGAAAGGAGAGCCGGAGTCCCACCTGGGGTCAGCGGACATGGAGCATGTCCCAGACCACAGAGAGGTGGGCCGAGAGGCTGGCACTTTGACCTAGAAACCAGCAGGTATTAGCTCAGATTCAGGTTCTGGATTCAGACCTGTGGTGAGGGCATTTCCAGTGTCTGTCAAACCATGTTCAGTTTCAGTTGGGACAGATAAGGGGTTGTTTGGTCTGTTGAAAATGTTTGTAGTAGTAGGTTTTTTTCTCTGGTTTTTCTCTCATTCCATTTCTGCCTTAACTTTAGCTCCTTGAGGGGAGGCAGGCTCAGATGGAAACTTTGTCATCACTCTCATGGCAGGTTGGCCAGGAGCAGTCATGTCGCCAAGGCTCGCCACGTGCCATGGGGGCGGGCTCAATGCTTCAGGCTCCATGCCTCTGAGCCAGGCGCCTTCCTGCCGCTCCCGGCTCCAGCACGGACACCCCCGCCTGCCCACCCTTCCTCTTCTCCCTTCTGGTAGACCATGATGCCTACCATTTAGTTACACCTTCTTGATCTCCTCTCTCTATTGTCCATTTTTCCAAAGAAGAGAGAGTGAAGTACTTGGGAGTCTGTATTTGAAAACCGTCTGAAGGCATTTTCTCGTTTGGTTTTGGTTTTCTCCTCACATCCCCAGGTGAAGCACTGAGATTCTTCCATTTAAAAACCCAGAACCTGAAACCCTCACTGGTCAACTCCAGTGTGTGTAGGAGGCCCCAGACCTTCGCGGTGTCTTTGAAGCCCAGCCCCCTGGTTTCCGTTTGGGTTTCCTCCCTTGGTTGGGAGTTGAGTTTTGCGTTTCCGTGTTTCACGTGTATCTTGTTCACTGTCGTCGAGGTCGAGCTTCACTGCGGCAGCAGCAGAGCGGAGTGTACATTCTGATTTGCTACGTTTATATATATCTTGAAGCTAAATGTATATATGAGTAGTTTGCCATGAGATAACACAGTGTAAACAGTAGACACCCAGAAATTGTGACTTCTGTGTTCTCTCCATTTGAGTATTTTGTAATTTTTTTGAAATATTTGTGGACATAAATAAAAACAAGCTACACTACAG EMBV3_07184 GGCAAGAGACTGGAACAGTTGTGGACCAGGGGGGTAGATCCCATTTCAGATGATGCTGTA Gene GeneID:528403|ANKFY1:XM_002695758:222_cdna Constitutive 0 NULL GeneID:528403 19 GENE ANKFY1 NULL ankyrin repeat and FYVE domain containing 1 EMBV3_35214 GTCTCTCCTTTTGTTTGTGTGTGACCCTGGGAGGTGTCTTCTTCCTGAGCTTCATCTTGC Gene BVV0102_185999 + 0 NULL GK000015.2:43545981-43633306 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15624 TTCTGCGCTCAGCAGAGGCTGGGGCTTTGCAGAACTGACTGGGTCTGCATCCTCCTTCTC Gene BVT0102_196279 + 0 NULL GK000023.2:51584485-51917494 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28802 CGGAGCCATCTGTTGAGTCTTCAAGTCCAGGAAGGCGACATGCCGATTCATGAACTTCTC Variant GeneID:538742|MIER1:NM_001076913:49_cdna 112^257 3 EMBV3_23069 GeneID:538742 3 GENE MIER1 NULL mesoderm induction early response 1 homolog (Xenopus laevis) EMBV3_19338 CTTTTTGGTTTGTGAAGAAGGCAGCGGTTAAGGGCACAAGGACAGCCGTGGGGACACTTT Gene GeneID:519081|SPRED2:XM_002691447:148_cdna Constitutive 0 NULL GeneID:519081 11 GENE SPRED2 NULL sprouty-related, EVH1 domain containing 2 EMBV3_06261 GTCAACCTCCTTGTGTTAGGCTGAGCATATCTAGAAAATTCCTAATGCCTGTCGAGCCCT Gene BVV0102_144030 - 1 EMBV3_35244 GK000010.2:81577274-81593973 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014965 TCONS_00014967 1 XLOC_008397 Coding TCONS_00014967 XLOC_008397 Coding Coding SLC39A9 10:81533906-81579142 j TSS10679 5065 1 TCONS_00014967_5 313 8 0.888206035149773 7.21804784331917e-05 0.000365097847246905 0.000331603592698029 7.33818872958354e-05 0.000274828652951026 9.07580674331627e-05 0.000211640599273728 7.9106914135474e-05 0.000328075381036293 0.000294498146698239 0.000298779132637653 0.00012395176308138 6.99494947601824e-05 0.000138179824533021 6.16647374585242e-06 0.00297677938308518 0.00148368115078953 0.00278408527372749 0.000378879504638024 0.000475422590465641 4.40634364376953e-05 0.00073704388184124 1.29146279724351e-18 0.00159733394576227 0.00027753262407605 0.000569775325343792 0.00010514527163384 0.00040553835225968 0.000643606085994262 4.36450922242443e-08 XM_005212025.1 zinc transporter PREDICTED: Bos taurus solute carrier family 39 (zinc transporter), 0.0 8031 99.93 0.880552813425469 NM_018375.4 SLC39A9 Homo sapiens solute carrier family 39, member 9 (SLC39A9), 0.0 4327 79.83 0.951036525172754 TCONS_00014967_5 sp|Q9NUM3|S39A9_HUMAN S39A9_HUMAN Zinc transporter ZIP9; 0.0 581 95.44 0.977635782747604 1 coding 1 1 1 1 -0.0635864222858574 0.637725097847324 0.0228143597210235 0.682030059243722 CTTGGCGGCCATGGCAGCTGTAGTATCGGTGGCTCCGGGTCAAGGCCCCTCGGAGTGGAGTAACATGGGCAGCACTGGGTATAGGGTAGAGACAGCTTTGTATCAGCTTCACTGCTGAACTCCACTACCCGCCATTACCGGCCTGCAGGACTCCTTTCCCCACTCTAGACTTGGAGGAGAGTTTGCCGTGATTGGTACGTTCAAGAGAGAAGTGCCTCGTGAACGCATCTGCCGGTGGGGAGGACGAGAACTGGAAAGTCCACCTGTTCTCTTGGAACAATCACACGTGTTTAAGGACCCGAGCTCCCGAAAAATTATAGACTAGTGGTATTGGATGAATAAAGGAAGCAGAATGGATGATTTCATCTCCATTAGCCTGCTGTCTCTGGCTATGCTGGTGGGATGTTACGTGGCTGGAATCATTCCTTTGGCTGTTAATTTCTCGGAGGAGCGACTAAAGCTGGTGACTGTTTTGGGTGCCGGCCTCCTCTGTGGAACTGCACTGGCGGTCATCGTGCCTGAAGGGGTGCACGCACTTTATGAAGATATTCTTGAGGGGAAGCACCACCAAGCGAGTCAAACACAGAACGTGATTGCATCAGACAAAGCAGCGGTAATACCGGTTGCCCATGAACATGAGCACAGCCATGACCACACACAGCTGCATGCCTACATCGGCGTTTCCCTCGTACTGGGCTTTGTTTTCATGTTGTTGGTGGACCAGATTGGCAGCTCCCATGTGCATTCTACTGACGATCCAGAAACAGCAAGGCCCAGCAATTCCAAAATCACCACCACGCTGGGTCTGGTCGTCCATGCTGCAGCTGACGGTGTTGCTTTGGGAGCAGCAGCTTCTACTTCACAAACTAGTGTCCAGTTAATTGTGTTTGTGGCAATAATGCTACATAAGGCACCAGCTGCTTTTGGGTTAGTTTCCTTCTTAATGCATGCGGGCCTCGAGCGGAATCGCATCAGAAAGCACTTACTCGTCTTCGCACTGGCAGCACCAGTCATGTCCATGGTGACTTACTTAGGACTAAGTAAGAGCAGTAAAGAAGCCCTTTCAGAGGTCAATGCCACTGGAGTGGCCATGCTTTTCTCTGCCGGGACCTTTCTTTATGTGGCCACAGTTCATGTCCTCCCTGAGGTGGGCGGAGTGGGGCACAGCCACAAACCCGACCCCGCTGGAGGGAGAGGCCTCAGCCGCCTGGAGGTGGCAGCCCTGGTTCTGGGTTGCCTCATCCCCCTCGTTCTGTCAATAGGACATCAGCATTAACTGGTGAGGGTCCAGCCTCGGTCCACGGCCGTTCGCCATTCAGTGAGAACAGCCGGCACATGACAGACACTCACTTCCTCAGCCTCTTGTCTCGCCTTGCCCATCTCCACCTGTATTCCTAAAGAGTCCAGAGGGAGGTGAGAAGAAAACCTGGAGTAATGGAAAGCTTTCAAGTAGAAACAGCACACTGCGAAGGATACAGACATTCCGTTGTGTTGTCTTTTCAAGGGCCCTTGGCATTCTGAGTTTTGGTGTTTCCCTTAACCCTATTCTCAGGGAAGATGGAATTTAGTTTTAAGGAAAAGTGGAGAACTTCCTACTCATAATGAAATAATTATGAAAGTACAGTATTCTGTAATTAAGCTAAATCTCTTAGTTTAGAGGCTCTGCCACTGTATCCATTGATTTTTTAACATGGTTCTCACCGTGTACGACTGGTGCTTTAGCATCTATGCCACTTGCCTTGAATGAAGGTCATGATGCCCATTGTGTTAGATGCTAAAGATAAGTAGTTCATCTGGGGCTAGAGTCGAGAAAATGATGGCAAGACACATTGAAAACTGACTTTACACTTGAGAGATCCGGTGAAGTGGGGACATCTGGGGGACTGAAACACCCCCTTGAGCACGCGCCTCTTGACAGAGAGCTTGCCTTCCATCAGGTGGGGCAGCAGAGGTGGACTAGCTTTAAAGAGGTGACGCGTTTTATAAAACATTTCTTTTCAAGTCCTCGTTTGTATAGAGGAGCCAAGTTCTAGTAGGTTCAGACCAACCTAGGCTTCCCTTCTGTGTTCTAAGAACAGTCAGATCCCAAAGTATCTTTGGAAATTAAGGGGTGTTAAATTTTAAGTGAATTTGAACAGTTACTGACATCTTTGTAGTAACCTTTTTAGAAGAAAGATCTCCCAAACCTACTTGTCCTTTTTTTGTCTCTTAAGTATTTATCTTGGTAGACCAGCAGTCCCTCTGGCAAAATACTCAGTGCCCCTTCGGGACTGCCAGGTCAGCATCACGCAAGCACCTGTAGCAGGGAAGAAAGTCAAGATATATCACAAATGGGAGGTGTTTGCCTGTTGATTTAAAGCTTATTAAAATCATGTCTTTTGTCTCTTCATCTTTTCTGTATTTTATTCCTAACTTTTCCCTCTAGCCCTTCCTCCCTACAATTTGCTGCTTACTGCTGGTGGTGATGCTAATATTTGTGTGAGTTAAGTTCTCATCAGGACAGCCTCTTCTTGGAACTGTGATGATACAGATAATATTGTTTCTGTCCTCTGTTCCTTTCAATGAAGTTACCTTTGTGTCAATTGCAGCTTTGTTAAGCCCTTAAAATGTCAACTTCCTCGTATGTGAGATGATACAATCACTGATATTCTGGTAATTTAAACAATTGAGATATTAAAAATAGTAAGCAAACTAGGATAATTTGCCCATATTTGCCAAAAATCCCTGTTAACCTTGTGTTATCAAATAAGTGTATAATATTATATTGTTAATTTATTTTGATTTTCTGTACCATTTCAAAACACATTTCATAAAGTGGGAACCAAGACTATTTTTGTCAGGGCGTTGGATTTAGGAGTTTTTGAAACATTTTGTATAATGCATAGACCAGCATGCCCAGGATTTCTGTATTTCTTCCTAGATGTGTCACTGGGTCAGCAGCTGTGGAAAGAGAACTTGTGAGCCCTCTGCTGGCTAGACCAAAGTAGCATAAACAGGATCTGGTTTTGGATAGTGGCTGGGAACCGTTGAGAACAGCATAAAAACCAACAGAAGGTGCAGCAGGAAAGTCTAGGTGACTTTCCTGCTAACAGCTGGGACTTCAGAGAGTCATGGGGTTTCACCCAGTCCTTCAAAATGACATGGTTGCCTTGATTCTCCCTGGAAATGTACTTTGTTAAATAAATAGCTCATTTTAGTGTCTGGTCTGGTTTGAATAGTGGCACTTTTCTATCATATTGTTGTGCAATGATCTGAAATTTGTTCTGCTGGCCAAAGCCTCTTTCTGCAGTGCCTTGCCATCACACTTAAAAGTTGGGCTAGAATATCTTGCCGGGTAGGGCCTTGAACTCTGGCAAGGGCAGAACCAACCTCCAAATTGGTTGTCCCCTCTGGACCCCACATTAACAAGCAAACCTTTCAAGGCCTATCAGCTCTCAAGAGCTGTGGGCTGTCCAAGATTTTAAAACTGCTACCCCAGGAACCACTCATTTCCCTCCTGGTCAGCAGGCAGAAATAGCCATACTAATCGTACAGGGCTCTAACGCATCTCCAGGCAGCAGGTACTGAGCGGCGTGCAGGGCCTCCTTCATTTGTGGGGGGCGGGGGAGAACTTATGTGGGCAGTGTCCAGGAGAGCCACACTGATGTCACTTACGGGCACATTTCAGCTCCATTTTCCTCTTGATGAAAACTGCCTCCTTTAGATGTGGATGCTTTATGCTCTCACGCGTTTGGAAACCTTGGCAATACTTCAGTCGCTGCTGTGATTACAGATGGAATTATTGGCTACCAAAGAGATGCAATTGATGATGAAAAGCATTGTCCTTCCTTCTTCATAACCAAAGTTAATCTTAATTACAATTTGACTCCCTTTCCTTGGTACAGATAGACTTTCTTCAGATGTTGAGTGCTGTCTTAAATGGCAAATTAAAGTGAAAATTATACTCATCCATTCCCTTCATTTGTTCGCCAGTGAATTGCTTTTGTCAGTTGCCGTATCCCCAAAGCAGCCATCTTCCAGGTATGATGGCTTTCCTGTGCACGCTGTTGCCAGATTTCAGTTCTTCAGGTGAATTCTGCCCTGGAGTGCAGAGTGTTGAAACACCACCAGAGGCTCTGTGTTGTCCCTTTCCCTCTTCACCTTTTTATTTCCCTATTCAAAACAGCCAAATCTGTTCCTATATTTTGAATCATTAGAAAAATGAGAGAGGTGGCTGTTTTGAGTGGTCAGTTCTTTGTAGAAAGAAGAAAATGTAATGGTGTTTTTTACTGGCCTGCTTTTAAGTGTCACTGCCTGGTTTTTCCTCTTTTTCAAGGATTAGAACTAGGAGGACATGCCAGCCCCTCAGATACGTGGTAGCCAGGTACTGAACATGGGAACTGTGTGTATGTCAACAGCACAAGCCCCCAAAGCATGTTCCTGCCTTTGGGGCCCCTGAGCCCCATGGGAGACTGAGAATGACCAGATTTATCCAGAACTGCTGTAGGGCAAGGTGAGAACCCTCTAATAGTGTTCCACAGGGGTACCCTCCTTGCATTACAGGATTTTTTGCTCAACACAGAATGGTCCACATTACCCAAAGAGCACTGTTTGAGATGCTATGAAATTAAAACCAGTCATGTAGCCCCTTTGTACCTGAGACGTCTAGATTCACCTGAGAAGACCTGAGGGAAATGTATGACTTGCATGAAAGGGCTCGACAGGCATTAGGAATTTTCTAGATATGCTCAGCCTAACACAAGGAGGTTGACTTTGATCTGTTTTCTCATAGCATCTTCTACTAAGTGAGAAATCTCATGGGCTAACACTGCAGTCCCCCTGGTTTGGTAGCCTAAATGGTGATTTTAAATGTCCCCTTTTTCTGGATCCTTTGTAAACATGAAATCATTCCACGGATGGCTGCCTTATAATTTTTGTCTCTTTCCACTTTAATTGTGAATGGTTAAAAAAGATGTTTTTGCTGTTTTCTGATTTGTTTTATGATATTAAATTTTTATTAGTGCATACCATATGTGAGTGGCTCATTATTGATCCTCTCGGCAGTTTTTCCATTTGGTGACCAGAC EMBV3_07693 AGTTGACCGTTGAGTGGCTCGAAGAACACCTCAGTAAACGTGCATACGTGATACGCCGCT Gene BVT0102_104379 + 0 NULL GK000019.2:35646259-35688978 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099809 1 XLOC_060052 NonCoding TCONS_00099809 XLOC_060052 NonCoding NonCoding - 19:35663895-35666664 - TSS74185 2769 1 TCONS_00099809_5 151 0.0942578548212351 1 0 0 0 0 0 0 0 0 0 0 0 1.65343862261225e-06 2.19525729860046e-05 0 0 1.7718332506666e-06 0.000629530667463082 0.00101328371471438 0.00141357280726083 0 0 0 0.000174194144063424 0.000122585610803448 0.000211903939791562 0 0 0 8.32518170969273e-05 1.75319638367285e-05 2.17126574727222e-06 0 noncoding 0 0 0 0 -0.118765953952701 0.544808015169551 -0.0319288126002771 0.511498483670841 CTTCCCACCCTTCACTGCAGGGGAAACTGAGGCTGGAGAGGACAGAACTTCCTTACTGAGAGAGGCCTTGAGCTCGCGTGCCAGCTCCAGGGGTCATGACAGAAGCCCCGAGGAAGCCCAGTAGCCTGGCAGAGGCCTCAGTGGGAGGTACCCCGTGGAGCTGACAGGTGAGGGGGGCAGCAGCCACTGGCCAGCGTTCAGGCCCTGCTTGTCCAGACCTGCTGGAAGGATCTCTACGTATCCTCTGGTTCCAGTTGGGAGCCCGGAGCCTGTCAGGCAGCCCCACAGGAGACAGCAGCAGGAGGTGAGTTCAGACCCAAGGTCATGTGGGCTGGCCTCTGTAAGTAGGGTCAGGCCTTGATGAGCAGAGAAGGGTGCCTGAGTCCATTCCTTCACCTCTGCCCGTTAGCCCCATGACCCACTCAGTCCCCTGTCCTTGTGTGTTATTGCTTCCTGGGCAGTGAGGGCAGTACATAGAGCAAAACGAGTTGTGAGAACACGAAGAGGTGGGGCGGGGCTGCAGGCCGGAGCTCATGCGGGAAACCCCTCCCTCTTTGGTCTCCTCCCTCTTAGGGGACAGAAGCACTGGCCACAAGAGGACGTCAGGGCATGGGGGGAGAACAGCCTGGTGTCAGGGGCTCCACAGGGTGCCGCTGGGGAGCCTGGGAAATTCCCTCCCATCTCTGAGCCTCAGTTACCTGGAGTGTAAAGTGGGCAGAGGTCCCACACCCATCCCAGGGCCTGTGTCTTGAGGTCGGTCACAGCCCGGCTCCCCGTGCACCTTCTGGTGGAGTCCTGACTGAACAGGACTTGATCAGAAACACAGATTCAGTTCTGGCTGTCTTCCTGTCACCACCCTGGGGGGGCCCTCTCAGCCTACCCAGAATCTCTCCTGATCAGCAACCATGATCCCAGCCTTGCCCAACCTGCTGCCCCTCTGGCTTCCCTCTGGGGTCTCCAGCCTCGGGGCCTTTGCACTTGCGGTTGCCCTGCTTGAACTCATCTTTGCAAGCCAAGCCACCCTCCATCTGCCCCCACATCTGCCCTGCTGTCCTCAGCCCTCAGAGCCGCCCACTCATTCCCTGCCCAGCACTGGAATTTTGAGAGCACTCGCTCAGGCCCAGTTCCCCTAGGAGGCTGAAGTCCCGTGAGAGCCCACTGCCCAGCCTGGTGTCCAGCACACTGGATGTGTTCAGTGATGACCAGCGAGTTCTGCAGTCCATCTGGGTTTATATATAAAAGAGCTGGACCATCACAGGGTGTGGCCCCAGGCAGGTCTGGAGTGGGCTCTGTCCAGGGAGGGGCCCAGCACTGGGAATGCCTCTGGGGGCCTGTCTGACGCCACCTGCCCCCGAGTGGGGAGACTCAAGTCTCAGGGGCCCTGCGTGCAGCCAGACAGGTTCCAGCCGGTTTGGCAGGATTGCTGTGGATGGCACTCAGCCCTTCCAAACTGTGGCCAGGTCACTTGGGGAAAGGTGCTTTGTCCCTCAGGCCCCCCTCTCCTGCCTTCTGTTCAGGAACCACACTCCAGCAGCACCCACCAGATGCCTCCCACAGGCCAGCCCCCCAGGGCAGGGGACCAGAAATGAGCACAAGGGCAGGTCAGGACTGTGTGGAATTTACAGATTGAGAATGTCCAGTTACACCTCATGGCCGGCCACGGCGGGTGGGAGAGCATCAGGGCTCTTGCACGAGCTCCGTGGCTGGGGGTACCCTAGCCTGAGATGGGTTCTGAGGGCAGGCGGCTTGGGTGGAAGGGATCAGGATAGATGATTGGGGAAAGGAGGCAGGGAAGGGGAGGGAAGGAGCCCAGGTGGGCTGCACTGGTGGGCAGGCCCCCACTGAGGGCACCTGGGTTCCCCGACCTGCCAGACCCCCAGACACTCGTGCAAGGGTTTTTCCTGCAAGCAAGGACACCCAGCCTCTAGCTCAGGCTCCTGAGATGCCTGAGGGGTCTCTGCCACCATGTTCCCAAAGTGCACGCGTGAATCTAATCACCAGAAAAGTGATTGACCCAAAAGTGACAGACCCAAAGTGACGGACGTTGTATAAAGTAACTCTGTACCGTCATGGAAAACGAAGGAAGGCAGAGAGCCATTTTCAGCATTAAAGGAAGTGAAATAGATGTGGCCCTGGTTTGTGGGGGTAGGGTGGGGGAAAGGGTTATAAAGACTGTTATTGGGCTGGTGACAAAGTTTGAAGTGGACCATATACCAGGTCTATTTGCGTTAATTTTGTGAATTCTATCACTGCCCTTGAGAAGAGAATGCCCTTGATCTCAGGACCCCAAGGGATCACCTGGAAGTCTTCACAGTGAAGGGCCTGAGGTGTGCAGTTGACCGTTGAGTGGCTCGAAGAACACCTCAGTAAACGTGCATACGTGATACGCCGCTCTGTTTAACTCTTACATATGACACACACAGCGTAGCATCACATTACTCCCCATGTGATCGCAAAGCATGATGAGAGAACAAACGTGATGAGGCGCTGATCACAGTGATGCGAGGCGAATGGTATCCTGGAAGTTCTTTCTTTACTCTCAGAAATTTTCTGTAGGTTTAGAATTATTCCAGAACAGAAATTTTAAAGGCCCTGGACCGGGTCCCTCAGTCCTTGGGGAGATGCCCCCTTTACCGCTCACAGCCCAGGTGACAAGCCATCACCTGGCCTCCTTCCCTGAAGACGCACAACTGGGTACGCCGGCCTCTTCGTGTAACATTATATCATGAGCGTTTTCCTGTGTAATAAAAACTCCTTCCAAAACACCAC TCONS_00096542 . 5' 17591 TCONS_00096542 . 5' 17591 EMBV3_20316 ACAGAAGTCAACCAGAAGCAGGGAGATCCCAGACAAGAGAGGTGGCCAGGGAGGCATCCT Gene BVV0102_111849 + 0 NULL GK000029.2:38026752-38034775 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165076 1 XLOC_100403 Coding TCONS_00165076 XLOC_100403 Coding Coding VPS37C 29:38033148-38063377 = TSS123375 2739 1 TCONS_00165076_1 350 5 0.909554055842265 0.000162647204961211 0.000330178303776833 0.000375025682616969 0.00047599542525855 6.46274471245935e-05 7.83579449632386e-06 4.25827891409854e-06 1.39995597029882e-05 1.44033216772964e-05 0.000113007437827918 2.0894358082227e-05 9.50867895106631e-12 1.04756494337678e-06 0 2.19922037656467e-05 0.00165959932017068 0.000351564451493305 0.00510245478539788 2.09172148789859e-05 0.00157597641477401 5.40663137829815e-06 0.000713492256845422 0.00163786394745106 0.000514140407385807 9.48942847432645e-05 8.08142920976724e-05 0.000342265738801542 2.14686971667646e-11 8.86198936660577e-06 0.000107557568700187 XM_005226859.1 VPS37C PREDICTED: Bos taurus vacuolar protein sorting 37 homolog C (S. cerevisiae) (VPS37C), transcript variant X1, mRNA. 0.0 4845 99.96 0.981380065717415 NM_017966.4 VPS37C Homo sapiens vacuolar protein sorting 37 homolog C (S. cerevisiae) (VPS37C), mRNA. 0.0 1764 74.57 0.996349032493611 TCONS_00165076_1 sp|A5D8V6|VP37C_HUMAN VP37C_HUMAN Vacuolar protein sorting-associated protein 37C; 2e-159 456 83.54 0.931428571428571 1 coding 0 0 0 0 -0.0793097711855853 0.478179091329576 0.0293485664196787 0.596726895082585 TTAGGCTGCGATTTAACCCCCCGACGGCTGTGGCAGCTGCGGAGGCGGCTTGGGGAAAGATGGAAACGCTGAAAGACAAGACCCTGGAGGAGCTGGAGGAGATGCAGAACGACCCGGAGGCCATCGACCGACTGGCCCAGGACTCCCCGGAGGTCCAGGATCTGCAGCTGGAGCGGGAGATGGCGCTGGCCACCAACCGCAGCCTGGCCGAACGGAACCTGGAGTTCCAGGGTCCACTGGAGATCAGCCGCTCAAACCTCTCAGACAAGTACCAGGAGCTCCGGAAGCTGGTGGAGCGGTACCAGGAGCAGAAGGCGAAGCTGGAGAAGTTCTCCTCAGCACTGCAGCTAGGGACCTTGTTGGACCTTCTGCAGATTGAAAGCATGAAGATTGAAGAAGAGTCCGAGGCCATGGCTGAGAAGTTCCTGGAGGGCGAGGTGCCCCTGGACACGTTCCTGGAGAATTTCTCCTCCATGAGAACACTGTCCCATCTGCGCCGGGTTCGCGTGGAGAAGCTCCAGGATGTGATGAAAAAGCCCAGGGCCTCCCTGGAGCCGGCCGGGGACACCCCTCCTCCACGCCCTCCCCCGCCACTGCACCCTGGCCCCCAGACGACGCCCCCGCCAGCTGAAGACGCTCAGCCACAGCCTCCACAGCCCTCAGTGGTCCCTCCCTACCCTTTGCCCTACAGCCCCTCTCCAGGCATGCCCGTGGGCCCCACCGCCCATGGAGCGCTCCCGCCAGCTCCGTTCCCCGTGGTGTCCCAGCCTTCGTTTTCCTACAGTGGGCCTTTGGGGCCCCCGTACGCCGCAGCCCAGCCGGGAACCAGGGCCCCTTCAGGCTACTCCTGGTCCCCGCAGAGGAGCATGCCGCCCCGGCCGGGCTATCCTGTGGCCCCCACTGGTGCCTCTGGGCCCGGGTACCCTGTGGTGGGGGGCCGGGCCCCCAGTCCTGGTTATCCTCAGCAGCCCCCCTACCTCTCAACAGGAGGAAAACCTCCATACCCCACACAGCCCCAGCCCTCAGGCCCCCTCCAGCCCCCCTACCCCCCCGGGCCCGCTCCTCCCTATGGGTTCCCCCCGCCTCAGGGTCCCACCTGGCCTGGCTATTAGGCACAGTCCTGGCCCTCAGCCCTTCCCTACTCCCACCTGTACCACAGCCTTCAGCCCACCCCTTGCTGAGATTCGAGGCTAAATTGGAAGTGGAGTTGGCTCCACGTGGACTCATGTTGCGCCCGGGAGCCTGAGGGGACCCAACTGGGAGCGCACCGGCTGACCAGGCACTGTGACTGGCTTGGCCACACCAGGCGGTCCCAGGGCCTGCGGGCCTCCCAGGGGAAAGGAGGACCTGGCTTCCATGGCTGGCTGTAGCTCTCCTGGTGCTCGCCAGGCAGGAAGTTCAGTCCTCCCCGTGTGCCCGCACCTGTGGACATCTCCTGGTGACTGCACAGACTCACGGATGCCTGAACCCAGTGCGGAGTTATCTCAGCGAGGGGCTGGCTGGCCCCTGCTCACCCCCTCCCTCTTCTCTGGGATTTAGCAAGTGCAACCACGGTGCCCACTCTAAAAGAGGCAGTTCTCTGTGTCTCTTGGTGCATTCAAGGATGGCCCACCGCACGTTCCATGTCAGAGTTGGATCAGGGGGAGAGAACAGAGTTAGGCAAAACAATGAGTGATTTTCACATCACATAAAGCCATAACAGGACTCTGACAGACTGATGTCAGGTCAGCTTGTACTTTGTGCTGCCGTTTGAACAGCAGCAGCAGTGCCCATGCAGGGAGCAGGCCGAGGATTGTGGAGGCGGATCCCAGACCTTGCTGGCCCTGGTTGGAGAATCCAGGGGCTGCCTTGGACCCTATGGCTGCAGGAGAGGGGGCAGTTCTGGTCCAGGAGACTGTGATCACATCAGGGGCTCATTTAGGAGCAGAAGGCCAGGTTGCCTCCCTGGCCACCTCTCTTGTCTGGGATCTCCCTGCTTCTGGTTGACTTCTGTGGCTCAGCCCCCTCCTGTCCACTCCTTTAGTGCCTTGAATCTCATCCATGGCAGCCCCCTCCCTTCCTTTGACTCTCTCCTGTAACTCTTCACGACCCCCTAAAGCCCTCCTAAGACGGACATCAAAAGATGCCCTAACAGTTACTTCCCCTGTGGTGCTTTGTAAAACACCATCACTATGTCGGAGTCATTTCTTTGCATCTCTCTTATCTTCAGAATGTAAAGGGCAGGGACTATGACTCTGAGCCACACACAGGCCCCACCATACTGGGGCTTTCAGCACCCAGTTCGGTAATAAAAAATGACAATAGACCAAAGGGGGTTGTGATGAATGAAGCATTACCTTGGTCATTACCAGATGTGAACCAGGTCTCAAGGGCAGACTCTGGAGCTGCTATCTGTTAGGAAGTCATGTGTGCCTTGAATTGTCCATTACCCGAGTACCCAGCACCTGGTGGGCCTGGGGTGCTGGGGGCCAAAGAGGAAACTCGACCTTCTGGTGCCTGCCCCTCCCGCCCCACCCCGCCCCGCCCCGCCCGGCCTGCGTGCCATCATAGGGTGCGTGCGATGAGATGCTCAGTCAGCCCTGTCAGTCCCTGACCAGTTGTGCTTGCTTCTCGTAAGTTATTTATACAGAGAAATCACTAATGGACTCTACTGGTTCGAGTACTTCTGTACTGGATGAGCGATCGCTGGTATGTTTGTATAATTAATTGCCATAATAAACTTTGATGAGTTACGAGTAG EMBV3_14918 TGCGATTACCAGCAGGAACCGGCAGCAGCTGAGGCCCAGGGCGGGCTGTGGCCCAGGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36301 GAGTCTCATTAATATATAGTCACATCCTGTTTCGAGCCTGGAAGAAAAATATGCCTTGGC Gene BVT0102_360864 + 0 NULL GK000005.2:34480827-34486989 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194642 TCONS_00194645 TCONS_00194648 TCONS_00194646 TCONS_00194644 TCONS_00194641 TCONS_00194643 TCONS_00194647 1 XLOC_117817 Coding TCONS_00194648 XLOC_117817 Coding Coding ARID2 5:34485601-34699248 = TSS145220 8346 1 TCONS_00194648_7 1834 0.00539180445722502 21 0.961033672523707 0.000678761587587255 0.000517285327254164 0.000613464246928475 0.000215020620479992 0.000654133291175128 0.000202664456616796 0.000914405479282424 0.000850675820784914 0.000921165471512273 0.000183419770556076 5.59470110579951e-05 9.46421051336713e-05 3.43480936162799e-05 0.000204150299678159 8.90000668772601e-05 0.000584783074227621 0.00107243496181427 0.000542213941165732 0.000668333984737887 0.000874579273307308 0.00023609636012005 0.000418416096235587 2.16445251406112e-96 0.00100366735830612 0.000773913314942919 0.000446531842060621 0.000505787130455318 6.71226278135313e-05 1.30138932581261e-05 8.45519449513855e-05 XM_002687323.3 ARID2 PREDICTED: Bos taurus AT rich interactive domain 2 (ARID, RFX-like) (ARID2), mRNA. 0.0 1.255e+04 100.00 0.833692786963815 NM_152641.2 ARID2 Homo sapiens AT rich interactive domain 2 (ARID, RFX-like) (ARID2), 0.0 1.121e+04 94.85 0.853582554517134 TCONS_00194648_7 sp|Q68CP9|ARID2_HUMAN ARID2_HUMAN AT-rich interactive domain-containing protein 2; 0.0 3514 96.62 0.999454743729553 2 noncoding 0 0 0 0 -0.155931196445528 0.18940219136812 -0.0215049914328606 0.712961108121042 ATGGCAAACTCGACGGGGAAGGCGCCTCCGGACGAGCGGAGAAAGGGACTCGCTTTCCTGGACGAGCTGCGGCAGTTCCACCACAGCAGAGGGTCGCCTTTTAAAAAAATCCCTGCGGTGGGTGGGAAGGAGCTGGATCTTCACGGTCTCTACACCAGAGTCACTACTTTAGGCGGATTCGCGAAGGTTTCTGAGAAGAATCAGTGGGGAGAAATTGTGGAAGAGTTCAACTTTCCCAGAAGTTGTTCTAACGCTGCCTTTGCTTTAAAACAGTATTACTTGCGTTACCTAGAAAAGTACGAGAAAGTTCATCATTTTGGGGAGGATGATGATGAGGTACCACCAGGCAATCCCAAACCACAGCTTCCTATTGGTGCAATTCCATCTTCCTACAATTACCAGCAACACAGTGTGTCAGATTATCTCCGTCAGAGTTATGGGCTATCTATGGACTTCAATTCGCCAAATGATTACAATAAACTGGTGCTTTCACTGTTATCTGGACTCCCAAACGAAGTGGACTTTGCTATTAATGTATGCACTCTCCTGTCAAATGAAAGCAAACATGTCATGCAACTTGAAAAAGACCCTAAAATCATCACATTATTACTTGCTAATGCCGGGGTGTTTGACGACACTTTAGGATCCTTTTCTACTGTATTTGGAGAAGAATGGAAGGAGAAGACTGATAGAGATTTTGTTAAGTTTTGGAAAGACATTGTTGATGATAATGAAGTACGTGACCTCATATCTGACAGAAACAAGTCTCATGAAGGTACATCAGGAGAATGGATTTGGGAATCTTTATTTCATCCACCTCGAAAGCTGGGCATTAATGATATTGAAGGACAACGGGTACTTCAGATTGCAGTGATTTTGCGAAATCTTTCCTTTGAGGAGGGCAATGTTAAGCTCTTGGCAGCTAATCGTACCTGTCTCCGTTTCCTATTACTTTCTGCACATAGTCATTTTATATCTCTAAGGCAATTAGGCCTTGACACATTAGGAAATATTGCAGCTGAGCTTTTATTGGATCCTGTTGATTTCAAAACTACTCACCTGATGTTTCATACTGTTACAAAATGCTTAATGTCAAGGGATAGATTTTTAAAGATGAGGGGCATGGAAATTTTGGGAAATCTTTGCAAAGCAGAAGATAATGGTGTTTTGATTTGTGAATATGTTGATCAGGACTCATACAGAGAGATCATTTGTCATCTCACTTTACCTGATGTGCTGCTCGTAATCTCAACACTTGAGGTGCTATATATGCTCACAGAAATGGGAGATGTAGCTTGCACAAAAATTGCAAAAGTAGAGAAGAGCATAGACATGTTAGTGTGTCTGGTTTCTATGGATATTCAGATGTTTGGCCCAGATGCACTGGCTGCAGTAAAACTTGTCGAACATCCAAGTTCCAGTCATCAAGTTTTATCTGAAATTAGACCACAAGCTATAGAGCAAGTCCAAACGCAGACCCATGTAGCGTCTGCCCCAGCTTCCAGAGCAGTTGTAGCACAGCATGTTGCTCCACCTCCAGGAATAGTGGAAATAGATAGTGAGAAGTTTGCTTGTCAGTGGCTAAATGCTCATTTTGAAGTAAATCCAGATTGTTCTGTCTCTCGAGCAGAAATGTATTCTGAGTACCTATCAACTTGCAGTAAATTGGCTCGTGGTGGAATCCTAACATCAACTGGATTTTATAAATGTCTTAGAACAGTCTTTCCAAATCATACAGTGAAGAGAGTGGAGGATTCCAGTAACAATGGGCAGGCGCATATTCATGTAGTAGGAGTAAAACGTAGGGCTATCCCACTTCCCATTCAGATGTACTATCAGCAGCAACCTGTTTCTACTCCCGTTGTTCGTGTTGATTCTGTACCTGATGTGTCTCCAAGTCCTTCACCCGCAGGAATCCCTCATGGACCACAAACTGTAGGAAACCATTTTCAGAGGACTCCTGTTACCAACCAGTCTTCAAGTTTGACTGCAACACAAATGTCTTTTCCAGTACAAGGTGTTCATACTGTGGCACAGACTGTTTCAAGAATTCCACCAAATCCTTCGGTTCATACCCACCAGCAGCAAAATGCTCCGGTGACCGTCATTCAAAATAAAGCTCCGATTCCTTGTGAAGTCGTTAAGGCTACAGTAATCCAGAACTCTATACCCCAGACAGCAGTTCCTGTTAGTATTGCTGTGGGAGGAGGAGCTGCACAGAGTTCTGTGGTTCAGAATCATAGTACAGGGCCACAGCCTGTTACAGTTGTAAATTCCCAGATGCTTCACCATCCATCAGTAATTCCACAGCAGTCTCCATTACACACAGTGGTACCGGGGCAGATACCTTCTGGCACTCCTGTTACAGTGATTCAGCAAGCTGTCCCACAGAGTCATATATTTGGCAGAGTTCAGAACATACCAGCATGTACTTCTACAGTTTCACAGGGTCAACAGTTAATCACCACATCACCCCAACCTGTACAAACTTCATCTCAGCAAACATCAGCTGGTAGCCAGCCACAGGACACTGTTATCATAGCACCCCCACAGTATGTAACGACTTCTACATCCAATATTGTCTCAGCAACTTCAGTACAGAATTTTCAGGTAGCTACAGGACAAATGGTTACCATTGCTGGTGTCCCAAGTCCACAACCCTCAAGGGTAGGGTTTCAAAACATTGCACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCAACAGTGGTACAACAGCCTATTCAACAGCCACAGCAGCCAACCCAACAAAGTGTAGTGATTGTAAGCCAGCCAGCTCAACAAGGTCAAACTTACGCACCAGCCATTCACCAAATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCTGGCCAGGCAGTTCAGCTAACTGGACAACCAAACATTACTCCATCTTCCTCACCATCACCTGTCCCACCTACTACTAACCAGGTCCCTACTGCCATGTCATCTTCTTCCACACCTCAACCACAGGGACCGCCTCCTACTGTCAGTCAAATGCTGTCTGTGAAAAGGCAGCAACAGCAGCAGCATTCACCAGCACCTCCACAACAGGTACAAGTACAAGTTCAGCAGCCACAACAAGTACAGATGCAAGTTCAACCACAGCAAACAAATGCAGGAGTTGGTCAGCCTGCTTCTGGTGAGTCGAGTCTGATAAAACAGTTGCTGCTTCCAAAGCGTGGTCCTTCAACTCCCGGTGGTAAGCTTATTCTCCCAGCTCCACAGATTCCTCCCCCAAATAATGCAAGAGCTCCTAGTCCTCAGGTGGTGTACCAGGTGGCCAATAACCAAGCAGCAGGTTTTGGAGTGCAAGGGCAAACTCCAGCTCAGCAGCTATTGGTTGGGCAGCAAAATGTTCAGTTGGTCCAAAGTGCAATGCCACCCACTGGGGGAGTGCAAACCGTGCCCATCTCGAACTTACAAATATTGCCAGGCCCGCTGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACAAGTTTTGCAACTGCAACTGTGAGTCAGGGAAATACAACTCAGCTCATTGCTCCAGCAGGAATTACCATGAGCGGGACCCAGGCAGGAGTTGGACTTCAGGTGCAAACGCTTCCAGCCACTCAAGCATCTCCAGCTGGACAATCATCTTGTACTACTGCTACTCCCCCATTCAAAGGTGATAAAATAATTTGCCAAAAGGAGGAGGAAGCAAAAGAAGCAACAGGTTTACATGTTCATGAACGTAAAATTGAAGTCATGGAGAACCCGTCCTGCAGACGAGGAACCACAAACACCAGCAATGGGGATACAAAGGAAAATGAAATGCAGGTGGGAAGTCTTCTAAATGGGAGAAAATACAGTGACTCAAGTCTACCTCCTTCAAACTCAGGGAAAATTCAAAGTGAGGCTAATCAGTGCTCACTAATCAGTAATGGGCCATCGTTAGAATTAGGTGAGAATGGAGCATCTGGAAAACAGAACTCAGAACAAATGGACATGCAGGATATTAAAAGTGATTTGAAAAAACCTCTAGTTAATGGAATCTGTGATTTTGATAAAGGAGATGGTTCTCATTTAAGCAAAAACATTCCAAATCACAAAACTTCCAATCATGTAGGAAATGGTGAGATATCTCCAATGGAACCACAAGGGACTTTAGATGCCACTCAGCAAGATACTGCCAAAGGTGATCAACTAGAAAGAACTTCTAATGGACCTATATTAACTTTGGGTGTTTCACCATCTGTGAGCAGTATACAGGAGGCCTCAAATGTGGCAACACAGCAGTTTAGTGGTACTGATTTGCCTAATGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCACCACATTCTGCAACCTCTGTTATACAGGGGCATCAAATCGTAGCCGTTCCCCACTCAGGATCAAGAGTGTCCCATTCTCCTGCCCTGTTGTCTGACGTTCGGTCTACAAATGGCACAGCAGAATGCAAAACTGTAAAGAGGCCAGCAGAGGATAATGATAGGGAAACAGTCACAGGAATTCCAAATAAAGTGGGGGTTAGAATTGTTACAATCAGTGACCCCAACAATGCTGGCTGCAGTGCAACGATGGTTGCGGTGCCAGCAGGAGCAGATCCAAGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTTCAGCAGAAGCAGCAGCATCCACCAACATACGTACAGAATGTGGTCCCACAGAACACTCCAATGACACCTTCACCAGCTGTTCAAATTCAGAGCCAGCCTAACAGTTCTCAGCCTTCTCCATTCAGTGCATCTAGTCAACATGGAGATCCAGTGAGAAAACCTGGGCACAACTTCATGTGTCTGTGGCAGTCTTGTAAAAAGTGGTTTCAGACCCCCTCACAGGTTTTCTACCATGCAGCAACTGAACATGGAGGAAAAGACGTATATCCAGGGCAGTGTCTTTGGGAAGGTTGTGAGCCTTTTCAACGACAGAGGTTTTCTTTCATCACTCACTTACAGGACAAGCACTGTTCAAAGGATGCTCTGCTTGCAGGATTAAAACAAGATGAACCAGGACAAGCAGGAAATCAAAAATCTTCTACCAAGCAGCCAGCTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAAAAGGCCATTGTGAATCATCCCAGTGCTGCCCTTATGGCTCTAAGGAGAGGATCAAGAAATCTTGTCTTTCGAGATTTTACAGATGAAAAAGAGGGACCAATAACTAAACACATCCGACTAACAGCTGCCTTAATATTAAAAAACATTGGTAAATATTCAGAATGTGGTCGCAGATTATTAAAGAGACATGAAAACAACTTATCAGTGCTAGCCATTAGTAACATGGAAGCTTCCTCCACCCTTGCCAAATGCCTTTATGAACTTAATTTTACAGTTCAGAGTAAAGAACAAGAAAAAGACTCAGAAATGCTGCAGTGAAAAATAATTCCACTTCTATAGTGGGGACTCAAAGTCAGATACATTTCACATACTGTTACTGAAGAAAGCACCAAGTCTTAATGGAACAGAGACCATAGAATGAATTATTTTATCTCCTCCCATGATGCTGAGGGGAAGCTTCGTATTCTGATCTCTGAGCGAATCCCTTTGTTCTCTGTTTAAAAAAATCTAAGAAGAAAAAAAAAAAAAACTGCTGTGGGATTGTCAACCAGCTTATCTGCAGGATGTCTCTCAGATCTGATAGATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAAATATACATGGAATATTGTAAAACCTACATGAGCAGATGAAATAGAAGCATTAAATATTTTTATCTATATCCAAAAAGGAGCACATTTTTATATTTACAAAACCGTTTAAGCTGGTTTGAATAATTAAAAAGTTTCAGCACACCTATACCCCCTGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATTGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTTCTTACTTGAGCCAATATATTTTCACTTATTTATTATCATAAAAATTTACCAGTCTGAATAGATCTTGTAAATATTTGTGAATAGAACGAACACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAGAAGCATTATTGGTAGGTTCTAAAGTTTTCTAGACTTTCCTGTCAATTGTAAGTAATTGTGATATATTCTACGCAGTGGATGAATGTTCTTTAAATTTGTGTAAATACTTCTGCAAAGGTACTGAAGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGATTTTTTTTTTTTCCTTTTTTTTCTTGTTTTTTTGTATTATACACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCATGTCATTTTTGTAGAAGAAAAACTATTTGAAGGTATTTTTTGGTTTTCCCTAACATGTATCCACTGTAAACGTTTGTCATGTGCAAGCTCAGAGCTTGGACAGAATTTTTTGTATTTGTAAATTGGTTTAAATACATGGAATTTTATACAGGTTTTCTCCTGTGTTATATATGCATTATGTGCAGGTATGATATTTTCTTCACTACTTTTTCTATCTTAATATAGTGTGGAATTTTATTGTATTATTCTTCCATTCTTAATACTGTACCACATTCCTGCTCAGAAACTGCTCACTTCCTTAAATTGTCTTTTTTCCCCAGCGTGAAATGTATCCATTTATAACTGCCTATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTGTGTCCTTAGGATGTGCAGTAAAAAATATAGACCTAACAGTTTATGTTATAGAATGGCTTTATTTACTTTGGTGACTGTTTATAGTTTTTAAATAAAAGACTGAACATTTTCTTGAGTCCTTCATTTCTGAGTATGCTTAAGACATTCTTAAAAAAGAGAGAATCTTAAATTCAGCTGAAGGCAATTGTGGTCCAGTCACCTATTTGATTACATGTTGATTTATAATACATTAGAGAACAGCAAAGAAAGGTATTTTACAGGACAGATTTGCATGAGATAAGTGGGAGATTATTTTCCCTTTGTTAGAATCCAAAGCAAACCCAGATTATTGTTTGATACTGTGTTTTTTTTGACTGTTCATTCAGAATGACAATGAATCCAAATCTTCAACTTGAATTTAGGGGGGGCAGATTCTTAGAGTAAAAGGGCCTCAGTTTGATATAAACTTTTTTTAGTATTTTGATTTCAACTTGTATCAAAGGAAAATCTTATTTCTCCCTGGCATTAAACTTTGCCATCTATTAATGTATGCTTAAGGAACTTTTTGTCCAAAATTAGTCTCAATTATTTCCCAGGATTGTGGCTTTATTCTTGGCTCACCTCCCAAGACTGGGGCTGCTCAGCAGACACCCCAGAGATAACATGGATGGCACTAAAATGGCCCTCAAACCTCCCAAATTGACAAGGCCTTTGGGTGGCTGACATCAGTTGGAGAATTTTCTGTTTATTGTACTTATTAAAAATCTCTCAAATTTTTCTAAAATAATTGTAACAATGTTTGTTTTAAAAGGTACGTTTATTTTCAAAATAAACTGCAATGGTAATTCATAGAAAAGAAACTCTAGATTTAGAAGTGATTTTCATGTTCACCATTCTTCCACTTCATTGGAATCGCATGCTGTAGTTGTAGTTTTTGTGCTCTAATATGTAAATGTCTGTAGTCCCTTTGAGCATTGGTCTCAGCAGAGAATTTGCTAAATGACCTGATGAAATCAGTCATGGCTTCCCACTTAGGTTTTCATCTTACAGCTTTATAGAACTATATAATGAAGTAGCATGGATTTGCTGGGTAATGGAATTAAAGTGCTCTTGCACAGTAAGTTCTGCATAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGATTTCCAGTATTGTTATTTTTGTCTAAAGTTCTGTAAATACATGCTTTAATGTTATCTTTGAGAAATCTATGTAAATACTATAGTCTACAACATAGAGACTGTAAATTCTATTATATATGTGCCTAGTGCTCTGTTGGCACTCAATAAATTTTAAGTAACAAAAGTGATAATCATATAGCCAAGGCATATTTTTCTTCCAGGCTCGAAACAGGATGTGACTATATATTAATGAGACTCAGTAATACAAGCCGCATATGAAAACTCGTCTCATTACTTTATAGTCATGCCATGTATGTTTTTTTTTAACCATAAAATGACAATAAAATGATTTTTAAAATAAGAA EMBV3_37140 TCCAGGAAGAGGGGTTGGGTGAGCTGCTGGGGTCTTTCTCCACAGTCAGCATTTTAAACA Gene BVT0102_103352 + 0 NULL GK000013.2:68225364-68258626 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043730 TCONS_00043732 TCONS_00043731 TCONS_00043729 1 XLOC_026010 Coding TCONS_00043732 XLOC_026010 Coding Coding ACTR5 13:68219954-68232222 j TSS32282 2416 1 TCONS_00043732_4 160 0.100579470198675 7 0.803619466862314 0.000183167037804954 3.01889640687243e-10 5.68386458623494e-148 5.84312930237099e-05 8.03228597035111e-05 7.04300603691385e-10 5.52418238617533e-05 9.93535627789704e-05 3.26577074462223e-05 0.00110767670714909 2.18721940234097e-39 0.000684333099958493 2.2988181820599e-06 0.000293875149766843 4.99532802025826e-06 0.00274473739699073 0.00115872911029776 0.00379404252457246 0 1.25485291830274e-30 9.66383029161416e-19 0.00153375981403142 0.000599243908378744 0.00132890114104529 4.11045649812745e-09 1.97849703970343e-09 5.32069511128904e-243 0.000432493494257952 0.000399433079012875 0.000516693683645165 XM_003585177.2 ACTR5 PREDICTED: Bos taurus ARP5 actin-related protein 5 homolog (yeast) (ACTR5), partial mRNA. 0.0 1761 100.00 0.403559602649007 NM_024855.3 ACTR5 Homo sapiens ARP5 actin-related protein 5 homolog (yeast) (ACTR5), 0.0 774 79.95 0.338576158940397 0 coding 0 0 1 0 -0.0306754383903273 0.842524496293302 0.0141600122706587 0.827328928190679 GAGTCTCTCTGGGACAGTCCTCTCTGGAGTGGCAGACTTGAGCTGCCCCCTCCAAAGGCTTCAAAGAAGACTCCTGACCTGGAGCAGCTCGAGCCATCTCTGGAAGATGTGGAAAACATCAACGATTTCGAGCCCCTGTTTTCGGAGGAGACGCCGGAAGTGGAGAAGCCAGTGGCCACAGTCCAGCCCGTGTTTAACTTGGCAGCGTACCATCAGCTGTTTGTTGGGACAGAAAGAATTCGAGCTCCAGAAATTATCTTCCAGCCATCTCTCATCGGAGAGGAGCAGGCCGGCATAGCAGAGACCCTGCAGTACATCCTGGACAGGTACCCAAAGGATGTTCAAGAGCTGCTGGTTCAGAACGTTTTTCTCACTGGCGGGAACATGATGTATCCTGGGATGAAGGTCAGAATCGAGAAGGAGCTGCTGGAGATGAGACCCTTTCAGTCTTCTTTTCAGGTTCAGCTGGCCTCAAATCCCGTGCTGGACGCCTGGTACGGAGCTCGCGACTGGGCTTTGGACCACCTGGACAACGAGGACGTCTGGATCACCAGGAAGGACTATGAGGAGAAGGGGGGAGGCTACCTCAGGGAGCACTGTGCCTCCAACGTGTACGTCCCCATCCACCTGCCCAGGCAGGCTGCGCGCTCTGCAGAGGCCCAGGCATCCGGCAAGGGCTCGGGGGCCGGCGGAGGCGGGGCCAGCGAGCAGGCATAGCAGAGGGGCCCCTCCAGGGACCTGGGGCCACATCGGGACAGTGACTCTGCCAGCTGTGTGCGGCCCGAGTCTGCTGGGAACATTTGGCTTCGAGATGGGTTTCTCCAGGGGAGAACAGTTAAGGGCCACTAGGAGTTACCCTTCGGAACTGTGCTCTTTGGGGCGTCTGCAGTGAAGGGACGAGCGGACTTTCGGGGACCTGCCGTGGGTGAGCCACAGGCTTCGCTTCTGCAGCAGTGAATGAGCATGATGGTGGCAGAGCTGTATAGACTGTGTACACAGGCTTCCTTCTTACTACACTTTAAAGCCTTTTTCGTTCTTGTTTTTATTTTTTTTTAATCCTTTTAATTTTATATTGTCCGCGTAGCTAGTTTTCTAAATTGATTCCAAAACCGTGTGAAGGCCCAGCAGGTGGCGCTCTTTCCTCTCCACCTAAGAAGATGACACTTAAGGGAACCATCACTCACGAACTCTCCAGGACTGGAAATATTTTCCTCCTCCTGTTATTTCTGCTGAGAAATAAGGAAAAGGGGCCCAAGAGGGACACGAGATTGTCCAAAGTCAGCTTCCTGAGGACCTGCCCAGTGCCGGCTTCTGAATGGGCAGGTGTGGGGCTAGTGGCCAAGCATCGTTCATACTTCCTTTGCTGGAAACTTTTCTACTGTATGAGGCCTTCGTACAGTTTTAGAAGTTTCTGTCCCTGTGAACTTGCTGGCTGCTTAACTTTGCAGGCCTTCCTGAAGAAAGAAACAGACTGGAAGAGGTTTGTTGTGTTACCTTTTCAGTTTTGTCACAACCTCATCTTTCCTGGGCCTTTGCAGCTTCTTCTTAAGTGGATGGATAACCCCTCTCTTCTCCAGAGATGCTTGGGGAGAATTTTAACTCTCAGACACAACCAGTATTTAAGCCCAGGAGGCCCCTGAGTTTCCTTGCCCCAGAATCCATATGTTTAAATCCTGTGGAGCGTCTGGGCCACCCTTCTGAGGAGGCCTCCTCAGAACCAGTCCGCCCGTGCAGTTCACCAGGCTTGGTCACCTGCAGCTCCAGCTCTCCAGGGTTTTGACACTGAAGACCAGGAAGGGGCAGCGGTGGTGGAGGAGGAGGCAGGAGACTCAGGCCAACTCAGGATGCCCCACGGCCTTGCAGGGAGCCACTGGCCGTCCACAGCTGGGCCTGAGGGTGGATGAGAGGGTGAGCGTGAGCTGACAAGGAAGGACAGATGTGAAGGAGGCAGGACTGGCCTCCCTGGAGAGGTTTTCATAATGGCGTTTCCAGGAAGAGGGGTTGGGTGAGCTGCTGGGGTCTTTCTCCACAGTCAGCATTTTAAACAGCCTGAAGAGCAATGGTGAAGTGCAAAGATTGCCCTGGACATCCAGCCTTGCTGAGGAAGGACCCTGACTGGGCAGCTGCACCACGTTTCCCAGCCTCCCTCACAGTTCTACCTGTAGCCATTTGATTTCTGGCCAGTGGGACACGGACGGAAGAGATGTACAACATCCAGGGCTGCTTCCATAAACCTCCCACGAGAAGCTCTCTTTCCCCGTCATCTGGCTGAACAGGGAGCTGTCCAAGGCCCAGGAGGAGCGTGGAACCAGAAGTGGAAGAAGCTGAGTCCTTAAACAACTGGTTGGAGCAGAGACCCTGCAAATCCTTCAGTGTAAAACTGTAATTGGTCCTCATAGAGATATGTAGAGTCCAT EMBV3_36939 CTGAAAGCACTGATTTTAATGTTGGATGGATGTCTCTTTTTCTAGGACCTGTGTACTTAG Gene BVV0102_274877 - 1 EMBV3_15920 GK000004.2:20014388-20153057 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33350 AATATATTCTCAGTCTCCGGAGGAAATGCCAAGGTTGAGGGGGAGGGCAGGGATACATCC Gene GeneID:616732|CCL16:XM_002695627:32_cdna Constitutive 0 NULL GeneID:616732 19 GENE CCL16 NULL chemokine (C-C motif) ligand 16 EMBV3_07517 TGCAGCGGCGACGAGGGGGCAGCAGCAAAGAGGTCATGTGTTTTAACGCAAAACTGAAAA Gene GeneID:100336762|LOC100336762:XM_002693985:239_cdna Constitutive 0 NULL GeneID:100336762 16 GENE LOC100336762 NULL kinesin family member 26B-like EMBV3_26372 TCCGAGGTTACTAAGCTGTATTTTGAATTATGGGCAAAATGCTGAGAAACCCAGTTGGCA Gene GeneID:100336802|LOC100336802:XM_002698912:103_cdna Constitutive 1 NULL GeneID:100336802 28 GENE LOC100336802 NULL protein phosphatase 3, catalytic subunit, beta-like EMBV3_34093 CAGCCACTCCAGGGGCAGGGACCATTTCCTCATTTTCTGAAAGCACTTTAATGATTACCC Gene GeneID:519558|MINK1:NM_001099376:120_cdna Constitutive 1 NULL GeneID:519558 19 GENE MINK1 MINK misshapen-like kinase 1 (zebrafish) EMBV3_17448 CTTCTAGTAGGCGTTTTGGTGAAGACAGCACACCCAAAGTAATGGTCCCTCCTGTCACAC Gene GeneID:526583|NPAT:XM_002692975:40_cdna Constitutive 0 NULL GeneID:526583 15 GENE NPAT NULL nuclear protein, ataxia-telangiectasia locus EMBV3_09088 TCTGCTGTGTGGTCCTCATGATTCTTGCGCCTCTTCGGGTCTTTCAGTGTAGCTGCAGTA Gene GeneID:282422|CYP11B1:NM_174638:2_cdna Constitutive 0 NULL GeneID:282422 Un GENE CYP11B1 P450c11 cytochrome P450, subfamily XI B, polypeptide 1 EMBV3_40766 ACTGCACATAACATCCTCCGGAGAGGAGTATCTCCACCAGCCAGCAACATGCTGAAAATG Gene GeneID:616774|CRISP1:XM_002697277:46_cdna Constitutive 0 NULL GeneID:616774 23 GENE CRISP1 NULL cysteine-rich secretory protein 1 EMBV3_12968 CCAATCTGGGCCAATCCTTCAAGAGGATTGTTATCCCAAGAGTAAGTTTTCTCGTGCCTC Gene BVT0102_057949 + 0 NULL GK000010.2:19174646-19197513 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43620 AAGCCTACCCTTTTCAAGCTAAAGTACAGGGTTTTTCCAAGACCAGCCATTGTGCGAGTC Gene GeneID:534065|LOC534065:XM_002698564:83_cdna Constitutive 0 NULL GeneID:534065 26 GENE LOC534065 NULL similar to erythroid differentiation-related factor 1 EMBV3_22137 CCCCAGCCTCATCTCTCAAACTCATCTTTTCAGACCATTGTTTACTCTAGCAGTACTGAG Gene BVV0102_231653 + 1 EMBV3_10935 GK000003.2:77975241-78243821 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178543 1 XLOC_108316 NonCoding TCONS_00178543 XLOC_108316 NonCoding NonCoding - 3:78103939-78104915 - TSS133302 976 2 TCONS_00178543_3 69 1 0 5.57610883598553e-05 1.02955361784686e-05 0.000436152547306451 0.000178675351168602 0.000136581813826368 0 0.000442158219528829 0 0 0.000210783194328888 0 9.15904446186407e-07 0 0 1.00536564205802e-05 0 0 0 0.000404099655005492 0.000132628900970706 3.11037450259289e-06 0 0 0 0.000220064232287906 3.60935945227986e-05 0.00141075789025696 0 0 0 0 noncoding GTTCAATTTAGGAAGGCAATTGAAGGAAGGGCAAATGATATAAGGCTCAGCACTGCTAGAGTAAACAATGGTCTGAAAAGATGAGTTTGAGAGATGAGGCTGGGGAGGGAGATAGAGGCTAAATGATGATAATTAGCCTTTATCCTAGAGTGACTGGAGCCAATACAGGGTTTTAAGTGAAAAGAGGATTGTGTCCAATTTTTAAGTTAGAAAGAAAGCCCTGGCAGGAAACTGCAAGGTGTGTCGGAGTGGAGGCAAGCCTAGAAGTAGAATGCTGTTGAAGATGCAGTTTCTTGTTCCAGTAGAGAGCATGAGGGTCTGAACTAGGAAACCATGTGGCCATCTTCTCCAGAGCTCCTCAACCACATGCAACATTATCCTCTTCTTAATCCACAGCGTATGTTTTTCCTCACTCATGGCCCCCACCACCCTGGGCCATGTGTTGTGATTATCTGTATATTTGTCTTCCTTCCTCTGCCAGGTTGAGAGCACTTTTCTTTCTCTGAATCCCTGGAGCTGGTTCACAGTTGGCACCGATGTGTTTTGAGGGTCATGGGGTTTGCAAAGAAGGGCATAGGGTGTACACAGCATGTGGCCCTGTTCATGAGCCAAACAAGACCTCCAGGCCTTCTGTTCACTCACTTCCCTTCTGTATTTGTCCTTAATCAAACTGTGCAAAGAAATCTTAACCGCCTTCTGTATTGTTTTGTGAATCAACAGAAGAGTCTTGTATGTTTACCAACCGGTGCTTTAAGGAAATAACACATAATCAGGGGAGGAAAAACCAGCTGGTGGTAGTTGGAGTTCGCCTGCCTGATTGTTTGTTTCCCCTCTCATAAAAAAAAAAAAAAAAACAAAAAACACTTGATCTTGGTTCAGCCTAGGACAATTTTCCAGAGGTGAACTTGCCAGTTCACAAAGACACTTGCGTGGAGGATTATTTTCTCCTTTGCTCCTCCATGACTTTCCCTTTGCC TCONS_00173754 TCONS_00173755 TCONS_00173756 . 5' 128700 TCONS_00173754 TCONS_00173755 TCONS_00173756 . 5' 128700 EMBV3_42880 ATTCTGATTCTGAAGATGAAGACAAAGCAGCTACCATGGTTTTGGAATACAGCGACCACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37587 TGCGTAGGCACTGTGGATGGGGGCTTCTTTCAGTTCAAAAGTGGGATGTCTGGAAATCAT Gene GeneID:100336651|LOC100336651:XM_002688010:164_cdna Constitutive 0 NULL GeneID:100336651 5 GENE LOC100336651 NULL serine/threonine protein kinase pim-3-like EMBV3_31279 AATATGATTGTGGACAACACCACCATGCAGGCTACAAGGAACACAGGGAAGAGTATTGCC Variant GeneID:614145|IDH3G:NM_001076313:76_cdna 795^941 2 EMBV3_15721 GeneID:614145 X GENE IDH3G MGC139826 isocitrate dehydrogenase 3 (NAD+) gamma EMBV3_05829 GTTCTTCAGAGGAGACTAGTGAGGTCACCAAGACAGCCAGCATGCAGACACAGTCTTAAT Gene BVT0101_022602 + 0 NULL GK000010.2:89738028-89756989 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07752 ACAAGGACCTGGAGGAGGTGAAGCAGAAGGTGCAGCCCTACCTGGACGAGTTCCAGAAGA Gene GeneID:281631|APOA1:NM_174242:20_cdna Constitutive 1 NULL GeneID:281631 15 GENE APOA1 NULL apolipoprotein A-I EMBV3_24752 CGAGCACTTCAGCATACATTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAACGCGAGAT Gene GeneID:508625|MOBP:NM_001077879:65_cdna Constitutive 0 NULL GeneID:508625 22 GENE MOBP NULL myelin-associated oligodendrocyte basic protein EMBV3_24004 TCTTGAAGGAGATGTATGACGCAGACCTTTTGGAGGAAGAGGTCATCATTAGCTGGTCGG Gene GeneID:504752|EIF5:XM_002696846:682_cdna UTR3_Alt 2 NULL GeneID:504752 21 GENE EIF5 NULL eukaryotic translation initiation factor 5 EMBV3_15626 GAGAACTCCTCTAGATGTAAAATCACCTCAGTACCCAGACCACCTCCTTGACGTGCCCAC Gene GeneID:338075|ATP6V0E1:NM_001034050:109_cdna Constitutive 2 NULL GeneID:338075 20 GENE ATP6V0E1 ATP6V0E MGC128729 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 EMBV3_02740 GACAGTGAGAAGAAGGTAAAATTGCTTACTGGCAAACGAGTTCAACTGGCCGAAGACCTC Gene GeneID:524142|OPA1:XM_002684831:161_cdna UTR3_Alt 2 NULL GeneID:524142 1 GENE OPA1 NULL optic atrophy 1 (autosomal dominant) EMBV3_27490 GAAAAGGAGTCAGGAATGGCTATTTCTCAGGAACAGTTGACCTTCAAGGATGTTGCTGTA Variant GeneID:788599|LOC788599:XM_002695316:2_cdna 90^180 1 EMBV3_08321 GeneID:788599 18 GENE LOC788599 NULL similar to zinc finger protein 665 EMBV3_03105 CCTGTAGGATATGGCGGTGATTGAAGAGAATCAGTCAGCAAAGAAACTTGCCAACCATGG Gene GeneID:530118|WDR69:NM_001075930:124_cdna Constitutive 0 NULL GeneID:530118 2 GENE WDR69 MGC142770 WD repeat domain 69 EMBV3_43209 TCCAGGAATGCCTCAACAGAGCCCTTCTTCAGAGCCATCTGTCTCCAGCCAGGTTGACTT Gene GeneID:514060|DYDC2:NM_001046163:308_cdna Constitutive 0 NULL GeneID:514060 28 GENE DYDC2 MGC137115 DPY30 domain containing 2 EMBV3_25850 AAAGGCATTCGTAATATGGAAAGGATTTTTGTTTTTGCTCATTTAATTATATACATTCTC Gene GeneID:617074|ERLIN1:NM_001164032:246_cdna Constitutive 0 NULL GeneID:617074 26 GENE ERLIN1 NULL ER lipid raft associated 1 EMBV3_22011 AATCAATGAGATCGTCTACTTCCTCCCCTTCTGCCACTCGGAGCTCATCCAGCTCGTCAA Gene GeneID:520639|CLPB:NM_001015625:10_cdna Constitutive 0 NULL GeneID:520639 15 GENE CLPB SKD3 ClpB caseinolytic peptidase B homolog (E. coli) EMBV3_10918 CATGACTCTGATGAATCAAGCAAAAGGCACGGGAGTGACAGAAACATGGAGGAAGCAGGG Gene BVT0101_011465 + 0 NULL GK000022.2:60599026-60913458 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127706 TCONS_00127707 TCONS_00127708 1 XLOC_077728 Coding TCONS_00127707 XLOC_077728 NonCoding Coding - 22:60749303-60753333 - TSS95465 676 1 TCONS_00127707_1 76 2 0.83271283196823 0 0 0 1.62130009635921e-05 0 0 8.62214135790144e-06 0.00069227368333029 0.00111822573487385 0.00371261361607408 0.00193109333833107 0.00189719576027884 0.00596137818057517 0.00892605792721275 0.00569471737461377 0 0 0 0 0 0 0 0.000191241655550597 0.000340908098467799 0 0 0 0.00108651213779963 0.000472952441991769 3.58993805580089e-05 XR_239487.1 LOC101905364 PREDICTED: Bos taurus uncharacterized LOC101905364 (LOC101905364), 8e-89 331 100.00 0.269230769230769 0 noncoding 0 0 1 1 -0.388502748998294 0.177598522590724 0.156082385834916 0.0487299935690735 GGGTTTCCTGCTCAGCTCCTGTGAGGACCAGCCTGCCCTGGGAGGTACGACGCCCCAGGACCAGCATCGTGACTGTGGACCCCTGGACCCTCAGCCCCGGCCCCTCTCCTGGAGGATCTCTGGGAAGTCGTTCCGTGTCTCCAGACTCCAGAGCCGGCCTTGAAGTCACAGCTGGGAGCCCAGGAGCAGAGCCCCGGAAGTCTGTAAGCAGGGGCGCCCGTTGGCAGCCTCTGAACCAGCTGGGATGAAAGCTTCCAAACAGACTGAGGAACACGTGGACCCGTGACTCTGATGAATCAAGCAAAAGGCACGGGAGTGACAGAAACATGGAGGAAGCAGGGTGCGTTGACAATGCCAAGGAAGGAGTAGGTGGTGGCGGCCTCCACTCCCAGCTTCACTGGGAATGCTTTGCACACTTCACCACCAGGCAGGGGTTTCCCGGGGTTTTGTCCCAGCGCTGCTTGATCAAGTTGAGATCACTCCCATCTCCTCAGTCTGGTAAGAGGTTTATGATGAACTGGATTTCCTATTTTATTAAGCAGGCTTTGACTGCCTGATTCATTTGTAAGAGAAAACATCCACGGAAAACCAAGAGAATTCTTCCCACGAAAAATGTTTTCTTGTGTATTCAATGATCTGCTTGAATAAACCTTTCTCCTGGCTTTTACTGGAGTAC TCONS_00127705 s 3' 149974 TCONS_00127705 s 3' 149974 EMBV3_31079 GTCCCTTGTCACAAGTTTAAAAACCTCACAGCTTGTATAATGTAACCATTTGGGGTCTGC Gene GeneID:509764|EIF1:NM_001014884:103_cdna Constitutive 1 NULL GeneID:509764 19 GENE EIF1 SUI1 eukaryotic translation initiation factor 1 EMBV3_08000 GTCTTCGTCTCTAACTGCGAGTGGATGTTGCTCTAGCAGAGTGAGACTAGACACTGTAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32632 TGTATCCTGCTTACTGACCAAATGCTTGAGAACCTTGAAATGGGCTGCCGACAACTCCGG Gene GeneID:523598|FBXL13:XM_002686773:88_cdna Constitutive 0 NULL GeneID:523598 4 GENE FBXL13 NULL F-box and leucine-rich repeat protein 13 EMBV3_24563 AGGCTCGCCAGGGAAATGTTCAATGAATTTGACGAAGCCCTGTTGAGGTTGGTTATCAGT Variant GeneID:281097|CSH2:NM_181007:15_cdna 396^503 1 EMBV3_05952 GeneID:281097 23 GENE CSH2 CSH1 PL chorionic somatomammotropin hormone 2 EMBV3_39620 CCTAATTTATATGGTGTGGTTGGACAGGATGTGATCTTTCATTGTCTAAAGGTGCTGCAC Gene GeneID:539378|SACS:XM_002691863:170_cdna Constitutive 0 NULL GeneID:539378 12 GENE SACS NULL spastic ataxia of Charlevoix-Saguenay (sacsin) EMBV3_30314 AAGGAGAAATACGAAAAGGATATTGCTGCATACCGTGCCAAGGGCAAGAGTGAAGCGGGA Gene GeneID:618297|LOC618297:XM_002686665:116_cdna Constitutive 0 NULL GeneID:618297 4 GENE LOC618297 NULL similar to high-mobility group box 2 EMBV3_39093 CAACTTGATATCGGAAAAGGCGGGACTATTCTTCCTCATTGATCCTCCTCCAGCATCGGC Gene GeneID:514560|CHCHD5:NM_001037601:77_cdna Constitutive 1 NULL GeneID:514560 11 GENE CHCHD5 MGC134601 coiled-coil-helix-coiled-coil-helix domain containing 5 EMBV3_20813 AGCCTGACATGGACGACATCTCACTCCTAGCACTGGAAAACACATCCTCGGACACGCTTT Gene GeneID:523187|LRRC50:NM_001035345:50_cdna Constitutive 0 NULL GeneID:523187 18 GENE LRRC50 LLRC50 MGC127917 leucine rich repeat containing 50 EMBV3_23281 GGGGTGCTCTTCAAGGAAACTCCCAGTGGTGAAATTAACTCCAAGTATGTTGGTAGCCCC Gene BVT0102_139014 - 0 NULL GK000023.2:7872670-8085004 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132176 TCONS_00132169 TCONS_00132175 TCONS_00132178 1 XLOC_080722 NonCoding TCONS_00132175 XLOC_080722 NonCoding NonCoding - 23:8054952-8071117 - TSS98945 1306 2 TCONS_00132175_3 79 0.439509954058193 3 0.919388765157139 0.000956029143110232 1.93913611092718e-12 2.65847571289121e-12 1.50533933178702e-14 8.83632283209413e-45 8.18212238553728e-75 3.25724056267499e-39 6.45488403101753e-13 2.63596173817478e-09 0 6.55723032830265e-12 2.91541116019258e-65 2.63596639958152e-14 1.92796545572297e-09 1.54932074497363e-53 0 0 0 1.3669550843938e-05 2.24307940031335e-12 8.40340263468453e-17 0 0 0 1.60866005101931e-11 6.24447335555505e-14 0.000128435506706162 0 3.70805158232274e-43 0 XM_005219781.1 ZNF419 PREDICTED: Bos taurus zinc finger protein 419 (ZNF419), transcript 1e-07 62.6 88.68 0.0382848392036753 0 noncoding 0 0 0 0 0.000437671192010214 0.997635049956653 -0.031029800075506 0.53469123988844 GCTTGGGAGCAGCCAGCACACCCTGGTTTGGGAGCACCATGCCCCGTCCCGGCCTCGGCAGACAAGCTGAGTTGAATGGGCAGAGCCCAGGGCTCAGCCTGTAGGCATCTGACCCTCAACAGCCAAGGAAGTTCAAGGTTAGAGGGACCACAAGTAAGGTACAGTTTGGGCCGAGGCAGAAAAGGAGAGACCACCTCAACGCAGATTCAAGCTTGGCTGGGTTCTACCCATACAAAACCTGCGCAGCAGGAGTGGAGGGAGACTGTGTCCTTCTCAAGAGAATTTGCTTTTCCTTTGCTTTAGCCAGGTGCCTCAGGGGCTACCAACATACTTGGAGTTAATTTCACCACTGGGAGTTTCCTTGAAGAGCACCCCTGGGTATTCTGTGGTGGGAGACGCCTCAGGATATCTGCTGGTCACTCCCGTCTGCGTCCACCTCTCTACCGTTTGCTGCTCCCGCTCACCTCTTACCTTCTCTGTTTCACCCCTTCTCCCTGCACCAGTGCACACCTGGAACCCCCAAGAACGTTACTGAAGATTTGGGAGACAACTGAAAGAGCCCTGAGAGGTTATGATAATGTCCCCACCAGCAGCAGTTACTGTCCCACAACTTCCCTCCTGCTCAGATCTCCAGGTCTCCCAACACCCTCACCCACAACCTCAGAAAGAATGTCATTTCCTCCCTTCAAGCCAAGACTCAAGCCATTCCTGCAGCAAGATATGCATCCCATCCCTTGGAGTCTGCATCAGGCTTGTCCACTCTGGAATCCAGAGCTGGGCCTACAGGAGGTGCTCAGTATTGACTAGTTGAATGAAATGGATGAGGCCCTGCTTCCGGGTCTGGCAAGGCAGTCATACTAAGTGTACGCATATTTCCTGGCTTCTGGGTTATTCAGCTTCAAAGTGACAGCATGTTGGGACAGCCACAGCTTTGGTCTAAATGCACATTTAGGAAAAACATTTCTCTAATGCTTCAAGGGCACAGCCAGGCTAGAGGAGCTCCCGATCTCCATAACTAAACAGCACACTTAACCTTGCAAACCGCAGCATCTGTGCCCCAATTTGTAGTGACTTTACAGTTTCCTCCAAGAACAAATAGGACGGATTTTTGCTTGTTTGTAACTACAGGGCCCAGCCTGGGATGGAGGAAAAGCCAAGGCAGCCTGTTCCAAAGCCTTAGTTCTCCACCTTCAGAAACCCAAACTGTTGACACCCACAACTGGCCTCACCCTGGAAAGAGCAAGGCAAGGTCTTTGTGACCCAAGCAGCCCCTGGAATTCCAGGGTCATTCACTCCATTCATTTGT TCONS_00133897 TCONS_00133898 r 3' 14023 TCONS_00133897 TCONS_00133898 r 3' 30187 EMBV3_41296 CTTCCTCGTGTATGACACCTTACTCTCACTCGCCTCGGACAGATTCCAGTTACACAGGGT Gene GeneID:539689|ALX1:XM_002687185:71_cdna Constitutive 0 NULL GeneID:539689 5 GENE ALX1 NULL ALX homeobox 1 EMBV3_12623 AGGGAACAGTCCAGGTCAGGAGGGTGCCTTCCTCTCATTCTGCTGTCTGTAAAATACCAA Gene GeneID:510225|GRINA:NM_001037593:47_cdna Constitutive 0 NULL GeneID:510225 14 GENE GRINA MGC134607 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) EMBV3_14753 ATGGAACTTTAGAAAACGAGCGTCCTGTCTCTGCCTGGCGAACTCCTATGCACCCTGCTA Gene BVV0102_262871 + 0 NULL GK000025.2:41313036-41346175 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24529 TTGCCAAATCCAATGGCCTAGAGGGTACCTGGTCTGGGGATGTCACCCAAAAAGATAGCT Gene GeneID:506664|PHF16:XM_002700066:43_cdna Constitutive 0 NULL GeneID:506664 X GENE PHF16 NULL PHD finger protein 16 EMBV3_33111 CTGGCACATCGAGTGTTCCACCATCGCCAGGGCACCTGCACGTGAAGGGCGGAGGAGAGA Variant GeneID:506598|CARS2:NM_001045944:45_cdna 780^913 1 EMBV3_32078 GeneID:506598 12 GENE CARS2 MGC137370 cysteinyl-tRNA synthetase 2, mitochondrial (putative) EMBV3_28260 AACATTTTAAGGGCTCTTGATGCAGAAAACAAGCCACCAAGAGCAACACTAGGGTAAGGC Gene GeneID:100337033|LOC100337033:XM_002696333:25_cdna Constitutive 0 NULL GeneID:100337033 20 GENE LOC100337033 NULL solute carrier family 38, member 9-like EMBV3_01825 TGCAGTATGTGTGACTTGGTGAGGGGGATGCAGAAGGACTGACGTCTTGAGAGTAGAGCT Gene GeneID:414925|BIRC5:NM_001001855:338_cdna Constitutive 1 NULL GeneID:414925 19 GENE BIRC5 MGC133855 baculoviral IAP repeat-containing 5 EMBV3_06362 CCTGAGTGGGCTAGTGTTCGGGGCAGGGGTAGACGCTTATGTAAGAAGAAAAGGACCTAT Gene GeneID:526045|SURF4:NM_001102509:133_cdna Constitutive 0 NULL GeneID:526045 11 GENE SURF4 MGC165910 surfeit 4 EMBV3_27080 GCAGGGTGCTTCGCGTCGCTGGCGCTTTATGGATGAAAAATTGACTGCTGTGACCTGTTT Gene BVT0102_083120 + 0 NULL GK000016.2:73683626-73764975 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068250 TCONS_00068259 TCONS_00068251 TCONS_00068253 TCONS_00068260 TCONS_00068252 TCONS_00068258 TCONS_00068257 TCONS_00068256 1 XLOC_041629 Coding TCONS_00068257 XLOC_041629 Coding Coding NEK2 16:73681049-73687521 j TSS51134 1850 1 TCONS_00068257_1 213 4 0.714727244629887 0.0142264045153151 0.0114685988317237 0.0144453285347744 0.0104914096683031 0.0105745116300012 0.0065097546896574 0.0133635668787416 0.0134171248561135 0.011558047898045 0.00317492720112248 2.1091933084435e-06 0.00131661986332071 0.00166461289801322 0.0018416953599074 0.000265416554180317 0.0102541940544004 0.00168355674297193 0.00691947140386423 0.0154404811929532 0.0144127845543297 0.00458545401833008 0.00296838355852938 0.00293946162266726 0.00433640032361302 0.0234283310092205 0.0142319365900171 0.010652536802083 0.00289227246751886 0.00135378597083662 0.00594432415614043 XM_005217365.1 NEK2 PREDICTED: Bos taurus NIMA (never in mitosis gene a)-related kinase 2 (NEK2), transcript variant X1, mRNA. 0.0 2260 100.00 0.676756756756757 NM_002497.3 NEK2 Homo sapiens NIMA-related kinase 2 (NEK2), transcript variant 1, 0.0 821 75.20 0.676756756756757 TCONS_00068257_1 sp|P51955|NEK2_HUMAN NEK2_HUMAN Serine/threonine-protein kinase Nek2; 4e-111 330 78.83 0.995305164319249 0 coding 0 0 0 0 -0.000347446322278844 0.997609954074019 0.0305543066796106 0.554876487469647 TGGCAGTGGGCAAAGTGGGCGAGGGGGTCAGCTGCGTGGTGACGGATGGCAGCCGGAATCGTGTCGGGGTCTCTCCGTCGTGTACACAGACATGGAACTGTAACACTGCACAGCGATTACCATCGACCTTCTGTTGAAGAAATTCTTGAGAATCCTTTGATAGCAAACTTGGTTGCTGAAGAGCAAAGGAGAAATCCTGAGAGGAGAGGGCGGCGAATAGGAGAACCAGAAAAGCTGCAGGACTCCAGCCCTGTGTTGAGTGAGCTGAAACTGAAGGAAATACAGTTACAGGAGCGGGAGGCAGCCCTCAAGGCCAGGGAAGAAAGCTTGGAGCAGAGAGAGCGCGAGCTTTGTGTCCGTGAGAGGCTGGCGGAGAACAAGCTGGCCAGAGCGGAAGGTCTGCTGAAGAATTACAGCCTGCTGAAGGAGCAGAGGTTCCTGTCTCTGGCGGGCGGCCCAGAACTGTTTGATCTCCCATCATCGGTCGTGAAGAAGAAGGTTCATTTCAGTGGGGAGAGTAAAGAGAACGTCATACGGGGTGAGAATTCTGAGAGTCAGCTCACCTCCAAGTCCAAGTGCAAGGACCTGAAAAAAAGGCTTCACGCCGCTCAGCTTCGCGCTCAAGCCCTGTCGGACATTGAGAAGACGTACCAGCTGAAAAGCAGGCAGATCCTGGGCATGCGCTAGCCGGGCCAGAGACACAGACCTGCGCAGGGTGCTTCGCGTCGCTGGCGCTTTATGGATGAAAAATCGACTGCTGTGACCTGTTTCTGTGGTTCCGAGGGTCGCACCTTTTCTAGAGTTGGCAGGGTATTTGGGTATTAATCCTGCAGTCGCCCAGCACCAGTTGTACCAAAGTCCACGCCTTTCATTTTTCCTCCTTTTGTAATGGACACTTCATAGAAAGAATAACACTTTCTTGGCTGGTTGGGCTTTTAATCCTGTGTGTGATTACTACTGGAACATGAAATGTTATATTCTAAACGTAGGGGGATGGGGAATACTATTAGGAAAAGATACTGACTCAGGGGCAGTGCTTATTGAGACATTTTAAGGGACTGAATGGTGTGCTTACAGCTGTCGTGTCTAGAGGTTTTAAATGTTTTAGAAGTTTTAATAAAAGTCTGAGGTTTTAAATGTTCTTAGCTTAGAGAAAACCTAACTGGATGTCGATTGGTCACTAATACCTTGACATCTCGCTTATAAATACCCACTGCTCTGTGGGAGGCTAGGAAAGAGAATGTGATGTTCCCAAGAGCCGTACAGTGGTGTCTTTTTTTTTTCTTTTTATTCTTTTTAGCAGTGTGTGAGCTTTCATTTGTCCCCCTCTTTCTCACTAAATAAAAGGATTGGTTAGTTTTCCTATACCCAGTGTCTCGTGTAGGTTGATTGTAGTTGGAGAATCTAATGTGGGTTGCAGGCGCCGGAGGCAAGGGCAGGAACATGGTCCCGAGGGCTGTGTGGTCACTTGGCGACCGGTTGTCTGTCCGTGCAAGCGGGCGGTCCTCACCACGGGCAGTGCGAGGCCTGGAGGTGTTTTCAGTGCGTGGTTGGAGGGAGGCTGTTGCTGAACACCCTGCGTCCCCACGGGACAGTCCCCACAGCGGAACGTCATTGCGCCACTCCTGAGACACCTGACCTCAGCGAACATTTGCTGGAATATCCTCCAGCAAAACATTTTGGTTTTGATGGACTTTTTGGTTTTTTTAAAGCTCTGACTTGTAATATGAATTAGCAGTCCTTGCTGTGCCCATGGCGTTTTTCATGTGATGTTTTCCTGGCAACGCTAATCCTTTTAGCTTAATGAACTAAGACCAAGTTATGAAGAGTTATAATAAATAGGAAAAACA EMBV3_38442 CCCTTGCCACTGTGGGATCTGATGGTAGATTCAGCTTTTGGGACAAGGATGCCAGAACAA Gene GeneID:513080|RAE1:NM_001015585:1018_cdna Constitutive 2 NULL GeneID:513080 13 GENE RAE1 MGC134058 RAE1 RNA export 1 homolog (S. pombe) EMBV3_26746 CACATCAGCCCGCGTCACTACAGCGACTTCATCGAGTTCTTGGGCAAAGCTCGCGAGACT Gene GeneID:781514|ZSWIM4:XM_002688754:114_cdna Constitutive 0 NULL GeneID:781514 7 GENE ZSWIM4 NULL zinc finger, SWIM-type containing 4 EMBV3_42523 CAATTATACAAAAAAAAAAAAAACCGGGGGGTGCTTCTTACCCCATCCCTGTCGCTTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43252 GCTGTCTGTTGAGTCAGTGGCTGTCATACTGGTAGTTTCTGTTGATGTGGGCACAGTGGT Gene BVT0102_026626 - 0 NULL GK000024.2:54285357-54433385 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143446 1 XLOC_087868 NonCoding TCONS_00143446 XLOC_087868 NonCoding NonCoding - 24:54393861-54395360 - TSS107657 1499 1 TCONS_00143446_2 314 1 0 6.35355943013154e-05 4.02206166260883e-05 6.17345539884159e-06 4.1548449463578e-06 0 0.000102610977437801 0 0 5.26359955093807e-06 0 0 9.54151775543594e-06 7.65652997729119e-05 0 0 0 0 0 4.78380150284766e-06 0.000599686894017692 1.62013229899121e-05 0 4.59008254684319e-05 0 4.62206897603773e-05 0.000145703522863736 0 0 0 7.82113763249945e-05 NM_001114052.1 LOC100135388 Xenopus (Silurana) tropicalis uncharacterized LOC100135388 (LOC100135388), mRNA. 1e-07 62.6 66.95 0.154769846564376 0 noncoding 0 0 0 0 -0.019677390163167 0.853486319549318 0.0382862616360413 0.68768207209551 TGGTATATAATGGGAAAAATAATAATCCCCAAATTATTATACAACTACCTCAAAACCAGGGGACAGTGTCAACGACAACTGACTCAACCTCATCTACGAGTTCTGACACTACTGTTGGCACTAGTACAGTAGATTCTGCCACAACATCCACTTCCACTACTGTGACAACAACCACTGTGCCCACATCAACAGAAACTACCAGTATGACAGCCACTGACTCAACAGACAGCACAATAGCGACAGCCACCACTTCCTCTGAACCAGTCACAACAGTGACTGCTAGTATTACCACTGAGGCTCCAACCACAACCACCACTGCATCGGCCGCATCTACTGAAACAACAACCGTAACAGTTGTAACTACAACAGCTGAACCAACTACCACAACTAGTCCCACCACAACCACTGAGACTACAACCACAACAACCTCCACTGCTGCTCCCACATCAACTGAAGCTACAACAAGCACAGTTGCCACCACTTCAGCGGAACCAACTACCGCAACAACCACCACCACGACTACTGCTGCTACAACCACAACCACCACCACTGCTGATCCCACATCTACTGAAAGTACCACCACCACAGTTGCCACCACTTCAGCTGAACCAACTACCACAACTGCCATGATTACCACTGAGGCTACAACCACAACCACCACCACTGCTGCTCCCACATCTACTGAAAGTACCACCACCACAGTTGCCACCACTTCAGCTGAACCAACTACCACAACAACTGCCACCACTACCACTGAGGCTACAACCACAACCACCACTACTACTGCTCCCACATCTACTCAAACTACCACCACCACAGTTGCCACCACTTCAGCTGAACCAACTACCACAACAACTGCCACCACTACCACTGAGGCTACAACCACAATCACCACCACTGTTGCTCCCACATCTACTGAAAGTACGACCACCACAGTTGCCACCACTTCATATGAACCATATACAACTACTAAAACCACTACCACCGAGGCTACAACCACAACCACCACCACTGTTCCTCCCACATCTACAGAAGGTACAACCACCACAGTTACCACCACTTCATCTGAACCAACTACAGCAACTGACACCACTACCACTGAGGCTACAATCACAGCAACCACCACTGCCGCTCCCACTTCTCCTTAAAGTACCACCACCACAATTGCCACCACTTCAGATGAACCAACTACCACAGCAACTGACACCCCTACCACTGAGGCTACAACCACAGCAACCACCACTGCCACTCCCACATCTACTGAAAGTACCACCACCACAGTTGCGACAACTTCAGATGAACCAGCTACCACAACTGCCACCACTACCATCGAGGCTACAACCACAACCACCACCACTGTTCCTCCCACATCTACAGAAGGTACAACCACCACAGTTACCACCACTTCATCTGAACCAACTACAGCAACTGACACCCCTACCACTGAGGCTACAACCACAGCAACCACCACTGCCACTCCCACATCTACTGAAAGTACC TCONS_00139372 . 5' 38026 TCONS_00139372 . 5' 38026 EMBV3_38118 TCCTGATCCTCCAAGTCAGCATTTACGTGGGCATGGAACAGGCTTTTGCTTTGATCCCAG Gene GeneID:535589|TAX1BP1:NM_001046409:16_cdna UTR3_Alt 2 NULL GeneID:535589 4 GENE TAX1BP1 MGC128202 Tax1 (human T-cell leukemia virus type I) binding protein 1 EMBV3_35595 AAGACTGCCTTCCTTCATGTCTGTACCCAGAACCCGCATGACAGTTGGTGGCTCTACAAA Gene GeneID:782472|LOC782472:XM_002690020:3_cdna Constitutive 0 NULL GeneID:782472 9 GENE LOC782472 NULL hypothetical LOC782472 EMBV3_33807 AAGTGTTAGGTCGGTAGAAAAGGAAAAAGAAGTCCAGAATGGGGGTGGCTAAAGACAAGG Gene BVT0102_406995 - 1 EMBV3_40943 GK000010.2:5071629-5122851 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17385 CGGCGTCCCCCCGGGCAGGAGACGGCGAAGGTGCTTGGAACCCAGGCCGTCGGGGGCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06380 GAGCAGATCAAGACAGACATAGCAAAAGATATGGACTTTCCAGTTGTTCTCCAGCCCACA Gene GeneID:525222|DNAJC5B:NM_001075866:25_cdna Constitutive 0 NULL GeneID:525222 14 GENE DNAJC5B NULL DnaJ (Hsp40) homolog, subfamily C, member 5 beta EMBV3_43218 CCCTTTACCAGGGCCTTCATATACGTCTTCTTTATGTCCTAACACACTGTTCAAGTCAGG Gene BVV0102_210871 + 0 NULL GK000019.2:13257398-13525423 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092321 TCONS_00092320 1 XLOC_056860 NonCoding TCONS_00092321 XLOC_056860 NonCoding NonCoding - 19:13278723-13288688 - TSS69503 1466 1 TCONS_00092321_1 68 0.156207366984993 2 0.853071055800883 0.00014070149228846 7.61363051317183e-05 0.00018304785468265 5.87784010986719e-06 0.000331133615988025 6.34356050381906e-05 2.12131132196067e-12 1.60214272207687e-15 1.72713648608505e-09 3.08672006494229e-05 0 0 1.52487151874295e-13 1.64470006043497e-12 1.00345317458644e-05 0 0.000124553177618892 0 0.000324754138775414 0.000333409439351446 0.000125025624531947 0 0 0 1.23627566227188e-05 0.00034825843486223 8.50361694366937e-05 0 0 0.000188643533266526 XM_005225438.1 PDE6C PREDICTED: Bos taurus phosphodiesterase 6C, cGMP-specific, cone, alpha prime (PDE6C), transcript variant X1, mRNA. 9e-29 132 78.26 0.109140518417462 0 noncoding 0 0 0 0 -0.203291238845358 0.192002960916848 0.00903422930621057 0.856625476830156 GCATTTCTCACTCGGGCCTGGCTTGCCCTCAGCCTCCTTGCCCTGATGTCTCTGGTGCACGGAGATGACACAGCTCTTTCTGTTTTCCTTTGATGTAGCTTTTTTAAAAAAAATTCAATTAATTATTTTATTTTTGGCTGTGTCAGGTTGCAGCACGTGGGACCTTGTGTTGTGGCAAGCAGGCTCTAGAGCGCATGGGTTCAGTAGCTGTGGCTCGAAGTCTCAGTTGCCCTGCAGTATGTGGGCTCTTAGTTCCCTGACCGGGGATTGAATGTGCGTCCCCTGCGTTGGAAAGCGGATTCTCAACCACTGGACCACCAGGGAAGTCCCGCCGTTGACATTGCTTTGAAAACCAACTGGGCCTCCCAGTGATCAGCATAATACATTCTACCTGTTATTCTACTTGCTGGGTGTGACACCCTTTACCAGGGCCTTCATATACGTCTTCTTTATGTCCTAACACACTGTTCAAGTCAGGAGCTTCAACACCACTTCAGATCGGGGAGAAGCCTGAGGCTCTGGAACAGGGCGTGTTTGTTTGGACAGGACTAGAAAGCTGGATTGGTTTCGCCGCCTCTGAACTGAAGAACGGGCTCTTCCCACAGGTGTGGCCGTTTGGCCTGAGAACATTCTGTCGAGTGGCTGGTTAATATACACTCGCTGTTGGCTTGGTGCCAGGATGGGTAGATGGACACGTTCATGGAAAACAGAGGCAACGTGCCTGTGACGTGTTCTCAGAGACCGAAAAAACAGCGGAGACCCGGCTTGAGGTGCTGTGGAGTCCCCACTGGAGACGAGGAAGACGAGTCTGGCTGATACAGAGACTCGGAGGAAAGAGCACCTGCCTCCTACCCATCTCCTGGAAGGCTGTCACCAAGGCCTGAGACACAAGAAAACTTAGGATGTGAAAGAATACTGATTCTGGGACTCTCATCAGAATAACAAAAGACAGAGCAAACCTCCAGGTATGGAGAGGGGACCAACTGTGTGACCCAAGGGAAGCCCGTCCTCTCCTTGGGCCCGACTTTTCTCTGCTGTGAAACTTCCGGACACCTGGCTGGTGCCAGGGTACAGGAGGCTCAATTATGCTGCTGCCTAGGGGCTCCTGTTCTTGGGAAGAGGTTACAGCTGGAGCCATAGAGCCTCTGTCTCCTGTTTGGAACTCTGTGAGAAGGACATCTGGTTTGAGAGAGATGAGGGATCGAGTGTGATTCCATCCTTCCTAAAAATGGGACAGAAATCATGCGACAGCGAATGTTGACTTGAGCTCAAGGTCTTTCCCACCAACACGGAGAAGCCTCTGTTCCACAGGGCTCTGAGGTCAGCTGCCTCTGCCTTGCTCTGCAACCCCAGTGTTCATGGGCTCAGTGTGTGTGGGAGGGACTCCAGGACCACTGGCAATATGTCAGCATTCTGAAAGTTTCATTCACTCATTAATTCATCCATTAAAAAAAAAAGATTTATTT TCONS_00092317 TCONS_00092318 TCONS_00092319 s 3' 18684 TCONS_00092317 TCONS_00092318 TCONS_00092319 s 3' 18684 EMBV3_40069 AGGACACAACCCAAGAGGAAGATGAGCAGGCTGGGAGGCCCAAGCAGTAACAACTGAGAG Gene BVT0102_010435 - 1 EMBV3_30135 GK000003.2:54609396-54643138 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04159 AAGCAGGACTGTGTGCTGTTGCTCAGTACGGTCGTTCTGGGGTTGGAGTTTTCCCCTCCA Variant GeneID:100316905|LOC100316905:XM_002689763:22_cdna 244^369 9 EMBV3_38008 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_42253 CTGGTCACCATGAAGAAGCTGGACAGTAAGGTCCACCTCCCTTTTGCAGTGGTCGGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06891 ATCTCCAGTTGAGGCAGGAACCGCAGGGTACCTCTGATTTCAGACTCCGATCGCAGGGTC Gene BVT0102_197493 - 0 NULL GK000007.2:12008532-12164088 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00162571 TCONS_00200854 TCONS_00186491 TCONS_00054133 TCONS_00142473 TCONS_00162302 TCONS_00231771 TCONS_00218950 TCONS_00131534 TCONS_00189709 TCONS_00123275 TCONS_00156651 TCONS_00063805 TCONS_00186556 TCONS_00240372 TCONS_00021875 TCONS_00255144 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00186558 TCONS_00238289 TCONS_00131532 TCONS_00147823 TCONS_00032734 TCONS_00131535 TCONS_00149042 TCONS_00111145 TCONS_00131533 TCONS_00232767 TCONS_00222116 TCONS_00063813 TCONS_00231768 TCONS_00186557 TCONS_00129560 TCONS_00207145 TCONS_00218944 TCONS_00186834 TCONS_00098203 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00131531 45 XLOC_090915 XLOC_099452 XLOC_122505 XLOC_112543 XLOC_031942 XLOC_086898 XLOC_099184 XLOC_141259 XLOC_132269 XLOC_080239 XLOC_115747 XLOC_074829 XLOC_095111 XLOC_038531 XLOC_112608 XLOC_147036 XLOC_012548 XLOC_158076 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_112610 XLOC_144956 XLOC_080237 XLOC_089710 XLOC_018972 XLOC_080240 XLOC_090919 XLOC_067045 XLOC_080238 XLOC_142251 XLOC_135425 XLOC_038539 XLOC_141256 XLOC_112609 XLOC_078273 XLOC_125663 XLOC_132263 XLOC_112885 XLOC_058449 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_080236 NonCoding TCONS_00186557 XLOC_112609 NonCoding NonCoding - 4:28981025-28981694 - TSS138925 669 2 TCONS_00186557_2 107 1 0 5.04003842825042e-05 1.65220881881981e-05 2.6347800294678e-05 7.67128918004173e-05 8.04618190590629e-05 6.67340001743376e-05 5.02366887481601e-05 3.23543833301851e-05 0.000114776353102677 0.000100904156947909 2.52179144529941e-05 5.85168111144673e-05 9.65431640714993e-05 0.000139283126129092 0.000217891737511642 0.000570913133593805 0.000109102723715775 0.000139862620326037 5.3594374410669e-06 0.000294426402091814 6.63550157869369e-06 4.15164045014223e-05 9.51539900942328e-05 5.25334629035089e-05 1.81238148793375e-05 3.33537756756119e-05 2.66257992959201e-05 1.82949026561345e-05 0.000135697002898516 9.73582836758597e-06 XM_002698950.2 FRMPD2 PREDICTED: Bos taurus FERM and PDZ domain containing 2 (FRMPD2), 3e-11 73.4 78.32 0.212257100149477 0 noncoding 1 0 1 1 -0.00615637206504964 0.968424672851612 -1.02613056179786 0.00497382998682155 CAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGCTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAACACGAAGGGGCAGTTTTTCCGTGCATCGTTCGGAAAAAACCCCAGGTTCCAAATACAGCTCGACAAGCGGCCTCTCTCCCCGGGGACATCTCGAGAGGCAAGCGGAGTTCCATGCCTCAACCCAAGACGAGGCCTGACTCTCCTGTCCCCAGTCTGCAGGGACCCTGCGATCGGAGTCTGAAATCAGAGGTACCCTGCGGTTCCTGCCTCAACTGGAGATGAGGCCCTCTTCCAATGCACCAAGCCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGGCTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGCCCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAATGATGCGCTCCCCCTCGCCACTCGCA TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 EMBV3_01950 GGCCTCGAGCTTCCACGTGGGACGGCCGTTCAGCTTGGAGGCTGTGCAGGGTTCTGCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38800 ACATTGTGTTGCGTGTTGGCTGACCACTGCCCCCGCCCATTGTCAGTTTTCTTCATTGTA Gene GeneID:508167|RRM2:XM_002691481:368_cdna UTR3_Alt 3 NULL GeneID:508167 11 GENE RRM2 NULL ribonucleotide reductase M2 polypeptide EMBV3_12323 CGCCGTCACTCTCCCCCAGAGGACCCAGAGACCAATCCTTGAATGTCTAGTTAAAAGGAT Gene GeneID:281486|SELP:NM_174183:76_cdna Constitutive 0 NULL GeneID:281486 16 GENE SELP NULL selectin P EMBV3_30955 GGTCAACGTTAAAAGTAATCACGGGACAGAAACCGGAAGAATTCCTGTGACCGCTTAACC Gene GeneID:522707|RAP2A:XM_002691964:12_cdna Constitutive 1 NULL GeneID:522707 12 GENE RAP2A NULL RAP2A, member of RAS oncogene family EMBV3_16640 ACCAAAGAAAGATAAAGCAAGGCAAGAAAAATGTGACAAGCCGAGGCGGTGAGCCGGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00639 GCATCCCTGCCTGAAACTCTGGTTTAAGAGATCTTCCTGAGCTACACTGAGTCCGGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13993 GTCTGGCATCATTGCTTTCAGTAGGAGCATGTGCTTGTCGGCCGTTCAGTGCTCATATCA Gene GeneID:513601|SNRNP48:XM_002697596:64_cdna Constitutive 0 NULL GeneID:513601 23 GENE SNRNP48 NULL small nuclear ribonucleoprotein 48kDa (U11/U12) EMBV3_03698 GATGATCTAGTGGTGGACGTTTCCAATGAGAATGACAAATCCTCCACCCCTGGACTCAAG Variant GeneID:514326|TLE3:XM_002690487:429_cdna 766^918 3 EMBV3_03453 GeneID:514326 10 GENE TLE3 NULL transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) EMBV3_36124 TCTGTGGAAGGTGGATGTTCCAAGCTGTACACGAATGACCTGTAGACCCCATGGAAGCTC Gene GeneID:785005|APLP2:XM_002699235:193_cdna Constitutive 0 NULL GeneID:785005 29 GENE APLP2 NULL amyloid beta (A4) precursor-like protein 2 EMBV3_24000 AGAGGAGCCTGTCGGGCGACGGTCCATAGGGTTGCAGAGAGTCCAACCCAACTGAAGTGA Gene BVT0102_310010 + 0 NULL GK000003.2:36547224-36867769 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173074 TCONS_00173075 TCONS_00173073 TCONS_00173072 1 XLOC_104283 NonCoding TCONS_00173075 XLOC_104283 NonCoding NonCoding - 3:36737342-36745996 - TSS128755 1253 1 TCONS_00173075_2 82 0.488427773343974 3 0.85554143071767 9.54493773832749e-09 0.000880797573047142 0 2.4396779947001e-12 0 5.11847419683371e-16 2.07647230795102e-05 3.94870712576945e-09 0 4.19301322375118e-22 0 0 2.62756562023148e-15 0 0 0 0 0 6.86759310376265e-05 0.000393107667993162 1.26108416713966e-15 0 0 0 0.000110221627647165 5.82054072537035e-09 0.000371748365140951 0 0 0 XM_003581785.2 RIPPLY3 PREDICTED: Bos taurus ripply transcriptional repressor 3 (RIPPLY3), 7e-137 491 88.54 0.3048683160415 0 noncoding 0 0 0 0 -0.094225381154265 0.507823490092646 0.0117986359610176 0.79721899271171 TGGGTTGGGAACATCGCCTGAAGGAGGAAATGGCAATCCGCTCCAGTATTCTTGCCTGGAGAATCCCACAGACAGAGGAGCCTGTCGGGCGACGGTCCATAGGGTTGCAGAGAGTCCAACCCAACTGAAGTGATAAAACTAAGGCACAGCTATGGGAAGTAACTTGTTCAAAGTCACACAGCTGGTTTAAAGGCTATAAACTTGTCAGCAATTATTTAATACCCGCCCGCAGCCTCCATGTGCTTATAGATCACATCCCCAACCTTCACTATTCAAACTTATTGTTCTTACAAAGAACTGATGCTTTTGAACTGTGGTGCTGAAGAAAACTCATCAGAGTCCTTTGGACAGCAAGGAGATCAAACCACTCAATCCTAAAGGAAATCAACCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAGTTCCAATACTTTGGCCACCTGATGCGAAGAGCTGACTCATTAGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGACAACAGAGGATGAGATGGTTGGATGGCATCACCAACTTGATGGACATGAACTTGGGCAAACTGAGGGAGATGGTGAGGGACAGGGAAGGCTGGTGTGCTGCAGTCCATGGGGTTGCAAAGAGTTGGACACAACTTGGTGACTGAACAACAACAACAATGGAATTCTAACCCACAGCACACCTTTTCTTTTAGCACTCTTTAAGCACATCCCTTGGTGTCCAAGGAAATCCTGAGATATCACTTTAAATTTTTTTAAAAGGTAAAGTGTTTGTATAAAAGGAAGAGAAAATACCTCAATTCCAAACACTTTGGTAAATGTAGTGATTAAAATTTAGAGGAAAACTGACCCAAAAAGTATATATACAGCTAGTTTGTGTTGATCATAAGAAGGGAACAGATTCATCTCCCTCCTTGGGATTGAACATGCCTTGCTCTTTATCAAGGACAAGCAAGGTGGAGGAGAGCAAAAGCCAAAGGCCAAGATCTTTAAGAGACAAGATTAATGACACTCATAAAATTGATGGAGGCCTGTGGGCTTGAAGTGATTGTGATAGCTCACATGAGTCCAAGGGTGTAAATATTTAACAAACAATCACTTCGTGGTCTCATATTTACAAAAGTGAAAGTGGGGATATAATTCTCTCTTTGAGGACTCAGTTATTTAACAATTAAAGGAAGGAAAAAAGAAAATCTAAAGGGATTTCCCCTTCAAATGATTTCCTTCTGAAACCAGAC TCONS_00173071 s 5' 307527 TCONS_00173071 s 5' 308595 EMBV3_29771 ATTGGACCCCGAGGTTCAGGAAAGACCATGAGTCTCTCAGAAGATAGAAGTGTGAAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40409 ACTTTTGGCTATAACAAGAACAACAAGAAGATACGGCAAGATTGTCTCCACTAAGGCCAT Variant GeneID:509798|RBMS2:NM_001034365:971_cdna 135^301 2 EMBV3_37843 GeneID:509798 5 GENE RBMS2 MGC128164 RNA binding motif, single stranded interacting protein 2 EMBV3_27358 GTTTGGCATCACACATTAAGAGCTAAGAAATTCTTGTACTTCCCAGACTACCTTGTGGGG Gene GeneID:788312|LOC788312:XM_002685354:233_cdna Constitutive 2 NULL GeneID:788312 2 GENE LOC788312 NULL similar to Formin-like protein 2 (Formin homology 2 domain-containing protein 2) EMBV3_17998 GCCCGTACTCCTCCGGGCCCAACCCCTTTCTTTGTGGTTTGTTTTGGTTTGCTTCTGTTT Gene GeneID:531695|NKX2-2:XM_002692142:126_cdna Constitutive 0 NULL GeneID:531695 13 GENE NKX2-2 NULL NK2 homeobox 2 EMBV3_14941 AAAAAGGTGTCCGCCTCCGGCTTTGCGCAGGCCAACTACACGGACCCGCAGAGCAAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05991 CATGGGTGTTAGCATGGGACGAGGGGGTGAACTGGGTCTGGACTCTTCAATTCAGAAAGA Gene GeneID:507256|RAI16:XM_002689765:27_cdna Constitutive 0 NULL GeneID:507256 8 GENE RAI16 NULL similar to Retinoic acid-induced protein 16 EMBV3_29972 GAGCTGATCCAGTGCTCAGAAGAATCTGTCTGTGAGCAAATACTTGAAAATGGGTTCAAC Gene GeneID:518458|SEMA6D:XM_002690938:268_cdna Constitutive 2 NULL GeneID:518458 10 GENE SEMA6D NULL sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D EMBV3_27249 AAAGGTGTTATCTGCCTCATCAGCATTTTCGGGACCCACCACAACCCATCTGTGTGGCCA Gene GeneID:507016|CYP4F2:NM_001035042:35_cdna Constitutive 0 NULL GeneID:507016 7 GENE CYP4F2 MGC126966 cytochrome P450, family 4, subfamily F, polypeptide 2 EMBV3_04635 CTGTCATAGTATATAAGACTAAAAAGTTTTGTAAATGGAGTGTCCTTAGAAGTTGAAGAG Gene GeneID:518834|UBA6:NM_001083438:35_cdna Constitutive 2 NULL GeneID:518834 6 GENE UBA6 MGC140422 ubiquitin-like modifier activating enzyme 6 EMBV3_25944 GCAAATAAGCCAGCAGGTGGTGAAGAGGTCCAGAACGACATGCAGAAACTACTTTTTTGG Gene GeneID:539795|ABHD3:NM_001076187:31_cdna Constitutive 0 NULL GeneID:539795 24 GENE ABHD3 MGC142807 abhydrolase domain containing 3 EMBV3_25659 AGACCTCATGGACTTTGAAGGCAACCACCGATTTGCCAAGTACCAGTCATTCAGGATGGC Gene GeneID:497016|FCN2:NM_001010996:14_cdna Constitutive 1 NULL GeneID:497016 11 GENE FCN2 FCNB ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin) EMBV3_00343 AGAGTCCAATGAGTCTCCTCTCGCAGAAAGGGAGCCAGGAGGAGTTGTAGATGGTCTGAT Gene GeneID:100126054|LOC100126054:NM_001105656:99_cdna Constitutive 0 NULL GeneID:100126054 X GENE LOC100126054 MGC157041 spindlin-like EMBV3_20838 CTGGTTCAGCCCCTACCATCGCCGGAGGAAGCTCATTCACCCCGTCATGATCGAGCACAT Gene GeneID:506184|HEXDC:NM_001101864:51_cdna Constitutive 0 NULL GeneID:506184 19 GENE HEXDC MGC139025 hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing EMBV3_08978 CCAGGGACATGCAAATCAAAACCACTATGAGGCATCACCTTACACCTGTTAGAACGGCTC Gene BVT0102_163393 - 0 NULL GK000006.2:68580086-68695101 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41965 GAGACTCCTCGATCTTCAGGTTCTAAGCGCAGCAGGCGGAAAGCAAACAGCAAAGTGCCA Gene GeneID:614434|CDCA3:NM_001035449:76_cdna Constitutive 1 NULL GeneID:614434 5 GENE CDCA3 MGC127035 cell division cycle associated 3 EMBV3_01924 GACCTCTACGGAGCATTTTATTGAATTCCTGGTGATACTTAGGCAGCGGCAAAGCCAGGC Gene GeneID:529312|SSR1:NM_001102122:220_cdna UTR3_Alt 2 NULL GeneID:529312 23 GENE SSR1 MGC140667 signal sequence receptor, alpha EMBV3_03200 CACTTCAAGGAAAAGAAGAAATCTTCAAAGTCTGCCAGTGCAAGCCATTCTGCAAATGCA Variant GeneID:519522|LOC519522:NM_001046244:32_cdna 797^874 1 EMBV3_23443 GeneID:519522 9 GENE LOC519522 MGC137434 chromosome 6 open reading frame 182 ortholog EMBV3_13873 GTTATCCTCTACACTATGGGACTATCATGAACAGCCTCCTCTCAATGCAGCTGGCTCTGG Gene GeneID:518429|LOC518429:XM_002689075:14_cdna Constitutive 0 NULL GeneID:518429 7 GENE LOC518429 NULL similar to Olfactory receptor 6F1 (Olfactory receptor OR1-38) EMBV3_29283 GTTTTCTTTGCTGAACTTGATGGATGTTTTTCTGTTGTGTAATATGATATGCCAGTTTGC Gene GeneID:511417|SHOC2:NM_001101943:33_cdna Constitutive 2 NULL GeneID:511417 26 GENE SHOC2 MGC151791 soc-2 suppressor of clear homolog (C. elegans) EMBV3_04427 CACTGTGGTGTATTTATGCTGAGAGATTTCTGTTTATTTCCTCTTGCAGTCGTGCGTATG Gene GeneID:521103|C28H1orf57:NM_001075816:84_cdna Constitutive 5 NULL GeneID:521103 28 GENE C28H1orf57 C1orf57 MGC140669 chromosome 1 open reading frame 57 ortholog EMBV3_35094 AGGCAGGGACTCACCTGTTTTTATAAATAGGGTAAGCGCAGCCATTTTGGATTTTGCAGT Gene GeneID:523958|ZC3H18:NM_001102082:294_cdna Constitutive 0 NULL GeneID:523958 18 GENE ZC3H18 MGC160124 zinc finger CCCH-type containing 18 EMBV3_36282 AGTTCTCCGGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATGCCATT Variant GeneID:540653|PCBP2:NM_001034711:54_cdna 614^706 2 EMBV3_20585 GeneID:540653 5 GENE PCBP2 MGC127996 poly(rC) binding protein 2 EMBV3_29098 GTTTTCGCCTTATAGGACAAAAGAAAAACTAAAGCGTGATAATTATTACCAAAAGCATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31438 CGCCGCCCCAACAGAAAGAAATGCGACATCCTGAAGAAAGCCAAGAAGGTGGAGAAGTGA Gene GeneID:525371|BEND3:XM_002690125:155_cdna Constitutive 0 NULL GeneID:525371 9 GENE BEND3 NULL BEN domain containing 3 EMBV3_11310 GGATCTACATCCCCATGTTTAACTGACACATTGGGGGCTCAGTTGTGTGCTGTAATGTCT Gene GeneID:614279|MGC133632:XM_002692797:93_cdna UTR3_Alt 3 NULL GeneID:614279 14 GENE MGC133632 NULL hypothetical protein LOC614279 EMBV3_30251 TTATTTGACCTTTACCACCACCCCTAGCTTCCTCTGACACATCAGGAGACTGGAGCTCAG Gene BVT0102_221635 + 0 NULL GK000030.2:13807201-13866664 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28210 TCGATATCCTGGTGGCTGGCAGTATGCTTGGTCTTCAACAAACTCATCAGGAGATATAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33492 TTGGGGTATGAGGGCCTGTAACACCTATAACAAGGTTTCTGTTGCTCTTGCCAACTTCAA Gene BVV0102_155993 + 0 NULL GK000011.2:27263700-27630019 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027378 1 XLOC_015238 NonCoding TCONS_00027378 XLOC_015238 NonCoding NonCoding - 11:27581212-27583354 - TSS19415 1018 1 TCONS_00027378_1 61 0.31532416502947 2 0.525455394675385 3.92785216162486e-10 5.31791764983412e-05 0.00010908432841202 4.71748692015933e-05 0 0.000101900321249332 8.74008450465597e-06 0 0 4.04174000122973e-06 0 0 0 0 0 0 0 0 0.000616362127399256 0.000120092630885819 0.000521859066622311 0 0 0 0.000174591758631283 0.000318361067299262 1.38046488159415e-05 0 0 0 0 noncoding 0 0 0 0 -0.38989457584937 0.57499436268909 -0.0265193490489927 0.605637190649899 GCTCTCTCTCGGGTGGGCTGGCAGCCGCATAGCAGCCCCACTTCTCCAGGACTAGCCCGGGGCCAGGACTCCCCTGGATGTGGCTTTCCCAATGCTGGAGAGTGATTCTACATCAGGACTGGCCGAGGGTCCTGGGCCTTAGTTTCCAGAAGGATCTCAGGGTGCCTAAATCTCCTGCCCACCAGGGCCTCTCCCCCAAGACGTCTGTGCAGAGAAACCCACAGCCCCTCCACTCCCGCACCCCCAGGTTAATTGGGGTATGAGGGCCTGTAACACCTATAACAAGGTTTCTGTTGCTCTTGCCAACTTCAATTATGGGTGCATCTGCTTTTTGATTTTTCCAAGATGGTTTGATTAAAAAAAAAAAAAAAAATCCTCAAACTACAAAGGGACAGACTGTGCACAGTAGCTTTTTGCAGAAGCCTGCAGTTTCTTCCTGATGACATTCCCCTAGGAGCAGGAGGGTGCTTCAGAGGTCAACTTCTGGAAACAGGAAACAGTGATTAGCAAATCAATTCATTAAGGTCCGGTGAGCCATTGGATTACAAAGAGCAGCTATTTGTTAACTGAAGACAGATCTCGGCCCCTGATGAGAGCTCTGGTTCTTGGAGGAGGCAACCAAGACAACAGAGGAAGACAGTTGCAGGCCCTGCCAATGTGTGAAATTCCTGCAGCCCCGCTCCGCTGATGACAGAAATGACCGTAATAAACCAGGGAGGCCACAAGTCAAACAAATAGTTTGGTTGACAAATAGGCGTATAAACAAGACCTTGATTAATGAATTTCCTAATAGTTCTCTGTTTATTGACTCAGCTTGGTCATTAGGCCTGACATTGCCCATATACTTTGTATGGTACACTATCTTCCATTCATTCTAAGACTCCTTTATCAGTCTTTTTGTTGGGTATTTTCTGTCTCTCAGTTTTGTCTCCTGGGTTGGACCATGAGCCTCGAGCTCTGAGAACTCATCATGTGCTTATTGAAAGGACAGCGAAGTTACGGAGCTCCCTAAAATGAG TCONS_00027379 TCONS_00027380 TCONS_00027381 TCONS_00027382 TCONS_00027383 TCONS_00027384 TCONS_00027385 TCONS_00027386 TCONS_00027387 TCONS_00027388 s 3' 64947 TCONS_00027379 TCONS_00027380 TCONS_00027381 TCONS_00027382 TCONS_00027383 TCONS_00027384 TCONS_00027385 TCONS_00027386 TCONS_00027387 TCONS_00027388 s 3' 63401 EMBV3_19318 GTGCTGCTTCGTCCGCTGCAAGAAGTGCACGCAGGTCGTGGACCAGTTCGTCTGCAAGTA Gene GeneID:508008|WNT5B:XM_002687910:70_cdna Constitutive 0 NULL GeneID:508008 5 GENE WNT5B NULL wingless-type MMTV integration site family, member 5B EMBV3_10003 TTGAAAGCCACATGCACTTTATTAACAACTAAATTGCATCAACAGTATTCCTATGTTTTG Gene GeneID:540395|CEP97:XM_002684724:45_cdna Constitutive 0 NULL GeneID:540395 1 GENE CEP97 NULL centrosomal protein 97kDa EMBV3_00655 AGGAAGCACAAGGAGAATGTGAAAGACTACTATCAGTTTTGTATTACTTGTACTTAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00025 GGTTCCAAGAATTTGCTGGAAATGCGCCAGATATCCTTCCCTAGCTAGAGTTGGAAGTGT Gene BVT0102_234522 + 1 EMBV3_42417 GK000006.2:73648430-73762654 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40701 GCACATCCGGGTTTTCTAGGGCACCTGTTCCGTGCTCGCTGGGTTCCGGGCTCCTCTCCT Gene GeneID:100295237|LOC100295237:XM_002692271:1602_cdna Constitutive 0 NULL GeneID:100295237 13 GENE LOC100295237 NULL hypothetical protein LOC100295237 EMBV3_22194 GGAACCCAGGAAAAGCACGTGGCAAACGTGTTAATGAAGAACATGATAAAGAACTTGAAA Gene GeneID:519731|TYW3:NM_001015620:47_cdna Constitutive 0 NULL GeneID:519731 3 GENE TYW3 NULL tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) EMBV3_35673 CAAGATCAAGGCTCCTGGTTTTGCTCACCTGGCTGGTCTGGACAAGATGTCTAAGGGACA Gene GeneID:327697|NDUFS2:NM_001075137:209_cdna Constitutive 0 NULL GeneID:327697 3 GENE NDUFS2 MGC140012 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase) EMBV3_35724 GAGGGTCTCCATTTTCCCAGTCCACCTCTGCCTGGGACTCCAGAAAGACAAACTTCCGAT Gene GeneID:781304|LOC781304:XM_002689458:6_cdna Constitutive 0 NULL GeneID:781304 8 GENE LOC781304 NULL hypothetical LOC781304 EMBV3_32982 GACAAATGTTCCCGCCACTGCAAAAGTTCTGTTGGACGGTGCCCGCCTGGATAATAGGAT Gene GeneID:504724|PIGT:XM_002692479:557_cdna Constitutive 0 NULL GeneID:504724 13 GENE PIGT NULL phosphatidylinositol glycan anchor biosynthesis, class T EMBV3_43311 GCCTCAGATGCAGACCCCTCAGACGTGGGAGAAGGCTAATACCATGTGTGAGTGTTATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18299 CTGGTAACCTGTGCATGGTGACTGGAGGTGCTAGCCTGGGAAGAATTGGTGTGATTACAA Gene GeneID:614366|LOC614366:XM_002691102:5_cdna Constitutive 0 NULL GeneID:614366 10 GENE LOC614366 NULL similar to ribosomal protein S4, X-linked X EMBV3_39752 CCAAGGAGTGGCTAGCGAGCACATGAAGAGGTGGTGGTGAATGGGACTCCCTTCTATGAG Variant GeneID:614804|LGALS4:NM_001034768:736_cdna 195^399 2 EMBV3_13783 GeneID:614804 18 GENE LGALS4 MGC127318 lectin, galactoside-binding, soluble, 4 EMBV3_41910 GAGAGAACAGAAATGCACCGATCTCTAACTGAGCAGTGGCAGGACACTTTGGACTTGGAG Gene GeneID:538993|LOC538993:XM_002687624:760_cdna Constitutive 0 NULL GeneID:538993 5 GENE LOC538993 NULL similar to Uncharacterized protein KIAA0748 homolog EMBV3_41954 AAGAGAAAGAAAAAGATGATGATGATGAAGGTAGGATTATCGATTGTGCTTTTACTGTCA Variant GeneID:404150|METAP2:NM_001040493:22_cdna 322^834 1 EMBV3_35226 GeneID:404150 5 GENE METAP2 MGC127390 methionyl aminopeptidase 2 EMBV3_00870 TGGCTGGTGCAGCGAATAGCCCTTCGTGGTCACAGATTGTATCTTGGTCTGCCATCCTTT Gene BVT0102_018634 + 0 NULL GK000011.2:78188158-78218855 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18651 TCAGCATCAGAGAATCCACACAGGTGAAAAACCCTACGAATGTGATGAGTGTGGGAGGCC Gene GeneID:511795|ZSCAN16:NM_001034411:10_cdna Constitutive 0 NULL GeneID:511795 23 GENE ZSCAN16 MGC128656 ZNF435 zinc finger and SCAN domain containing 16 EMBV3_08945 ACCAGGGAAGCCAGATATGCAGTATAGTCTGTATCTAATTTTATGTTCGGATGAACAGGT Gene BVT0102_378960 + 1 EMBV3_28274 GK000008.2:49307582-49354206 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225273 TCONS_00225274 1 XLOC_137714 NonCoding TCONS_00225274 XLOC_137714 NonCoding NonCoding - 8:49316825-49320045 - TSS168700 1456 2 TCONS_00225274_1 56 0.485576923076923 5 0.54923889406648 0.000392334673374504 5.50655580753986e-10 1.71025644735118e-05 0.00126167835234196 3.04493522086437e-10 5.94490902269475e-06 1.18408756526081e-28 4.23853952151527e-05 0.00023136350681258 0 0 0 1.85236037020862e-37 0 0 0 0 0 0.000490032030791314 0.000531205961124782 1.13519608604413e-08 0 0 6.72392965496207e-11 7.95054477568988e-05 0.000710230769523728 0.000294612200138851 0 0 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 3e-117 426 93.64 0.192994505494506 0 noncoding 1 0 1 1 -0.333701900331856 0.112848751691494 -0.0120327583915493 0.81587403212937 GGCTAAGAAAAAGGTGCTTGTTTGTGCTAAGTCACCTCCGACTTTTTGCAACCCTATGAACTGTAGCTCACCAGGCTCCTCTGTCCACGGGATTTCCCAGGCAAGAAGACTAGAGCGGGTTGCCATTCTCTTCTCCAGGAGATCTTCCTGACCTAAGAGATCAAATCCAAGTCTCTTAGGTCTCCTGCATTGGCAGGTGGGTTCTTTACCACTAGCGCCACCTAGGAAGCCCTAAGAAAAGGGTAAAATAAGGGGATTCAAACCCAGAAGCCAGCAACAGTCAAGAGAACAGTACAGTAAGTGCAGTTATCCAGTGGGACCGTGGAGAAATGAGCTCTGTCCTGTATTTAGGGAACGTGAATACTCAGTTCTTGCTAACTATTGCAGACCTCTGGCTCCCAGATCTTCTGATTTGTCAAAGATAAGCTGGAAACCTGGACTTTCATGCAGTTTTACCTGAAATCAACGTTGCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTTCGACTCTGTGCGACCTCATAGACGGCAGCCCACCAGGCTCCCCCGTTCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGGGAAGTCGCTTAGTCGTGTCCGACTCTTCGCGATCCCATGGACTACAGCCTACCAGGTTCCTCCATTCATGGGATTTTCCCGGCAAGAGTACTGGAGTGGGTGCCATTGCCTTCTCCGAAATCAACGTTAGTTCATGCAAAACCTGAAACTATTATCATACTACATTTTAGGTTACCTCTTCCTGCTAAAACTGCCTATGTGACTTGATTTTATTAAGAACTATTTCACTAGCTATAAAAACAGACTACAAACCCCCCTAAAACTCATCTTAAAGCCTAGTAGTCTAATTTTTATTTTATATTTTATGGTTTTTACTTTATATATTCAATTTAACTTTTTTATATCATGATATATTCTCAAGGCAGAAGTAAAGAAGCAAAAACAATATAGAGTTTGGAACCACTCTATAGAGTCCTATAACTTAGAATTCAAATTTAAATTTAAAATAGAAAAAAAGGGAAACAACAACAACAACAACAACCCAGGATTCTCTGAGACAGGAAATATGTTAAGGAAAACCAATGGTTAGCCCTAATGGGCTGAGGTATCCAAAGATGCCACTCTGGCTTAGAACGTGGTCTTTTCATAGGTTTCCAGCTTTATCTGCCCTGTTTCTCTTGGAGTCTCCATGAACTTCTCATCAGCCCACACATCAAGCCCTGAATGGAGGCAGATTCCCTACCATATGAGCCACCAGGGAAGCCAGATATGCAGTATAGTCTGTATCTAATTTTATGTTCGGATGAACAGGTAATTTGGTTTTGCATAATTTTGACTTATGGGAAAAACGCCAGTTCCAAATAAAAATTTTCTCTGTTCCTC TCONS_00225267 TCONS_00225268 TCONS_00225269 TCONS_00225270 s 3' 9100 TCONS_00225267 TCONS_00225268 TCONS_00225269 TCONS_00225270 s 3' 9100 EMBV3_01605 ATGCTGGACGAAATCCTTCTGCAGCTGAGCCAGCCCCTGCACCCCTGCATGTTCCCTCTG Variant GeneID:281991|POLD2:NM_174428:10_cdna 936^998 2 EMBV3_39477 GeneID:281991 4 GENE POLD2 MGC138082 polymerase (DNA directed), delta 2, regulatory subunit 50kDa EMBV3_06186 TGGCAGCAGATGTTGGCCAGTTTTCCCCCCTGGATCCTGCGTCCTTGGAACAGTCATCAT Gene GeneID:530315|EGF:XM_002688103:182_cdna Constitutive 1 NULL GeneID:530315 6 GENE EGF NULL epidermal growth factor (beta-urogastrone) EMBV3_26043 CCCAGTGGGGACAAAAAGAACCCAATTAAATTTGAGGACGGAAACAGAGACCTGGAGCAT Gene GeneID:415110|PDIA4:NM_001045879:580_cdna Constitutive 0 NULL GeneID:415110 4 GENE PDIA4 MGC137149 protein disulfide isomerase family A, member 4 EMBV3_31411 TGGAAGGAAACTGGTTAAACGACAGAAACTGCTCTCAGTTGGAGGTATCTGGCCTCAGTG Gene GeneID:282139|ALOX15:NM_174501:24_cdna Constitutive 0 NULL GeneID:282139 19 GENE ALOX15 ALOX12 arachidonate 15-lipoxygenase EMBV3_04124 CCACATGCATTTCACTCCTCTGCCTTGGGTCTGCAGTCTCTGTCTTCTGCTTAACCCTGT Gene GeneID:281707|COPZ1:NM_174282:4_cdna Constitutive 1 NULL GeneID:281707 5 GENE COPZ1 NULL coatomer protein complex, subunit zeta 1 EMBV3_17799 AACACACAGTGAAGAGAAGCCTTATCAGTGCCAGCAGTGTGGGAAAGCCTTCAGGTATCC Gene GeneID:789258|LOC789258:XM_002688946:38_cdna Constitutive 0 NULL GeneID:789258 7 GENE LOC789258 NULL similar to zinc finger protein 77 (pT1) EMBV3_00460 CAGAGATGGGCGAAGGGTCAGAGGACACGAGAACCATGCCACATGGGAATGTGACAGCTT Gene BVT0102_429581 - 1 EMBV3_16641 GK000016.2:42825906-42840312 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067254 1 XLOC_041391 Coding TCONS_00067254 XLOC_041391 Coding Coding - 16:42837151-42837981 - TSS50611 589 1 TCONS_00067254_2 97 0.383701188455009 2 0.291917973462002 6.9299018189154e-05 0.000341202873682318 0.000109979565329207 0 8.38231121953126e-06 6.07310074285184e-06 0.000178218654066235 1.00419692961627e-05 0 0 0 0 0 0 1.66594424524035e-05 0 0 0 1.21747477115308e-05 0.000341867769655513 0 0 3.11513573261542e-05 0 1.17971939460656e-12 3.58853295985402e-05 0.000298428642175111 0 0 0 NM_001101133.1 FAM26D Bos taurus family with sequence similarity 26, member D (FAM26D), 9e-56 221 87.03 0.305602716468591 0 coding 0 0 0 0 -0.408833338777372 0.371110503623581 -0.0751120965904428 0.237990803033626 TGGGGTTGGCTGGCTTTCCGAATAAAGTCGCTATTCCTTGTCCCAACAATAACAAAAAAAAGACGGAGGGACCAGAAAGCCTTTTGCATCTAGAAGAGGCTGCTTATCCTCCACCAGACCACCATCCTGATTTAGGATTCAGTTACATAGATGTCTCTCCAGCTGCAAAGCGGATCCCTTCCAGGAAGCTGACGCCCGTCATCTTGACATCAGATCATATTGGATGTGTTGAATATGGCTTGAAGAGGCAGACCCTGATGCTGGAAAAGATTGAAGGCAGGAGGAGAAGGGGACAAGATGGATGGCATCACCAACTCAATGGACATGAATCTGAGCAAACTCCAGGAGATGGTGAAGGACAGGGAAGCCTGGTGTGCTGTAGTCCATGGGGTGCCAAAGAGTCAGACACGATTGAGTGACTTAGCAACAAAGGCTCCACCTGTAGCTTCTAGGTGGTGGAAGGGGTCTTGGCTTCAGGACATGATGTATGGCTCGGTGACTCCTCAAGGGGCAGGTGAAGCTGTCACATTCCCATGTGGCATGGTTCTCGTGTCCTCTGACCCTTCGCCCATCTCTGGCAGGCTCAGGA TCONS_00069236 r 3' 51 TCONS_00069236 r 3' 880 EMBV3_27429 TCCCACAGCGCAACAAAAGATTGGTGGGACAAGAATGCCTACCCGAAGCCACAGGAATTC Gene GeneID:541255|NARG2:NM_001076265:118_cdna Constitutive 2 NULL GeneID:541255 10 GENE NARG2 MGC140685 NMDA receptor regulated 2 EMBV3_01028 AGCTGGTGTCCAAGCCACATACCCCAAGTCTGGATGAGGACGGGATCAACTTAGAAGAGA Gene GeneID:533680|POU6F1:XM_002687268:130_cdna Constitutive 0 NULL GeneID:533680 5 GENE POU6F1 NULL POU class 6 homeobox 1 EMBV3_02116 AGTATATCCCAACTGGTCTTGTACGCCAAATCCCAAGCCCAATACCTCACTCCTGCCGCA Gene BVV0102_414511 - 1 EMBV3_07039 GK000021.2:34614704-34626180 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123819 1 XLOC_075371 NonCoding TCONS_00123819 XLOC_075371 NonCoding NonCoding - 21:34617776-34618006 - TSS92578 230 1 0 0 0 0 0 0 0 0 0 6.86099552042704e-05 0 0 0 2.49502764146947e-05 0 0.000469288671275322 0 0 5.45453246660884e-05 0.000467668972057646 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.00914909267838157 0.954605808160176 0.0309557530892467 0.639623913941087 ATGTGAAAGACCAGATCTGGGGGGCAGGCAGGATGTGAGTGGGTAGAGGGTGGTGCGGCAGGAGTGAGGTATTGGGCTTGGGATTTGGCGTACAAGACCAGTTGGGATATACTGAGCTGGAGGGGCCATGAGACACCAGTTGGGGGTGTCTGGGAGACAGCTGGAGGTTTCTAGGCTGGAGATAATGATCAGGAAGTTTTAAATTGAATAGGCCTGTGTCAAGAGAGAAG TCONS_00119280 TCONS_00119281 TCONS_00119283 . 3' 3073 TCONS_00119280 TCONS_00119281 TCONS_00119283 . 3' 3302 EMBV3_06852 CTGCTCCTCGTGCTCCTCTTCCTAGTCCTGTCTGCTGGGTCAGGATTTACTCAAGTAGTA Gene GeneID:783935|DEFB5:NM_001130761:4_cdna Constitutive 0 NULL GeneID:783935 27 GENE DEFB5 BNDB-5 defensin, beta 5 EMBV3_28472 TGTGCAAGGATGACTATGGGCTGGGTGAGCATGTGCGGCAGCTGCCCTGCAACCACCTCT Gene GeneID:507447|RNF126:NM_001075314:38_cdna Constitutive 0 NULL GeneID:507447 7 GENE RNF126 MGC151677 ring finger protein 126 EMBV3_08572 CAGGAGATGGTGAGGGACAGGCAGGGAGGCCTGGCATGCTATAGCACATGGGGTCACAAA Gene BVT0102_363999 + 0 NULL GK000003.2:65281186-65921136 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41730 CAGGAACTCTTTTGAAGCTCTGGGATCTGTGTGGCATTTCTAGTGCTCTCAGGTTTCCGG Gene GeneID:539353|HEATR3:NM_001078021:375_cdna Constitutive 0 NULL GeneID:539353 18 GENE HEATR3 MGC142558 HEAT repeat containing 3 EMBV3_30489 TTTAAAGCTGGCTTGGAAATTGTGTGCTGCTTGGATTAGCAAGGGGAAAGGCCCTGCCAG Gene GeneID:504602|TTC1:NM_001034217:10_cdna Constitutive 2 NULL GeneID:504602 7 GENE TTC1 MGC128644 tetratricopeptide repeat domain 1 EMBV3_22074 TGGATCCAGTCTGTGCAACAAATGGCAAAACGTACTCCAATAAATGCGTTTTCTGCAGTG Gene GeneID:777593|LOC777593:NM_001078140:88_cdna Constitutive 0 NULL GeneID:777593 7 GENE LOC777593 MGC151928 hypothetical protein LOC777593 EMBV3_21969 TGGAATGATATTAGGATTGGAAGGGACTTACGTGGTGGTCCGGTGGTTAAGACTCCGTGC Gene BVT0102_112495 + 0 NULL GK000022.2:10273699-10379810 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127928 1 XLOC_077782 NonCoding TCONS_00127928 XLOC_077782 NonCoding NonCoding LOC100848011 22:10377778-10379595 = TSS95584 1231 4 TCONS_00127928_1 67 0.291632818846466 2 0.323237885462555 5.71575193027205e-05 4.08141076537541e-07 7.51747056334618e-06 2.73448329157616e-06 3.45307781125348e-06 3.3236389111902e-07 6.67539404980501e-07 1.46501815781841e-05 5.23978965595893e-05 0.000144018685624532 0.000182677098882674 1.95049824637258e-05 2.45626776151747e-06 3.57481944681011e-06 1.52951745276795e-06 0.00124441087288873 1.6689949389337e-05 0.00038143036886931 2.26769500934361e-06 1.03937913494179e-05 6.1675896647546e-06 0.000520316752591996 0.000299032036190534 0.000986161916876597 0.000132265770294568 6.2095124853312e-06 1.42789976993184e-05 0.000215901461639282 0.000265407976477779 0.000154638485003737 XR_229355.1 LOC100848011 PREDICTED: Bos taurus uncharacterized LOC100848011 (LOC100848011), 0.0 2221 100.00 0.999187652315191 0 noncoding CAGGACGGGGGTCGGGAATGTGAACTGATGCGCGTGCCCGTTGGCGGCTACCCCTGCCTCGGTCACCTTAAGCTGTCCGGCCTAGAGGGCTTGGAGTTCCTGAGGGCTGGAGTGCGGCACTGCGAGGGAGGCGTGGATTACGGAACTGTGGTCTTTAGGCAGAGAGACACCAACAGGTGGCTTCATGGCAGGAGGATCATACCATCAGCCTTGGAAAGACAAAGTCTCTAACCTCGCGCTCTTTCTCTTGCCATGTCGCTGTTTTTCTCAAACCTGTGAACAAATATTGAAACTTGTTTTTACCTGGGATCAAGAGGGGCTTAATGTCCCCCCAAAATCATACTATGTTACGATCTGAATAAAAGGATTAATGACGTGTTTTGCTCAGTTAAAGATAAACTAAAAAGCAGACTTGCAAGAGAGAACCTATTCAGGTACCTGAATAATACCAATAATCCAATAATGTTTATTAAGTATTAGTTTATGTGACTGCATAATTAATGGAAAGACTGTTTGGAATGATATTAGGATTGGAAGGGACTTCCGTGGTGGTCCGGTGGTTAAGACTCCGTGCTCCCAATGCAGGGGGTCTGGGGTTCAGATCCATGGTTGGGGAACTATTAATAGATCCCACATGCCACAACTAAAAGATCAGGCATGTCACCAATAACAAGGAAAAAGATCCTTCCAGCCACAGCTAAGACCTGGTGCAGCCAAATAAATAACTACAAATAAATGTGTGTGTATGTGTGTGTGTGTGTGTTTAGGATTAGATTCTCTTGCTTTTTAAAATTTTACTTAGTCACTTGTTTCATCTCATATCAAACTAACAGAGAAAGAAAGGTCTTGCTGTGTCTTCTGGGAAAACCGGGAGGGAGCTCACACAGTATTTGCACAACATTCTACTAAACTCTTAAATACATTATCCCTTTCAGGACTAGGACCGACCTTGAGATATGGGAGTTATTATACCCATTTTAGTAATAAAGTCATTGAGATTCAGAGAAATAATGATTTGCCTAAGGTAACAAAACTAGTAGCTGAGAGAATCTGAGATTTGAAACTGAATTTGAAACTCTCGTCTTTCTGGCCCCAGTACCCCTTTTACTTTATGCCGTGTTGCTATAATTTTAATATTTAAGAGGGAAATATAAATGAAGCATCCAGTCAAGCAAATGTCTATGTTGCTCTTGTAACTTTATTATGAAAGTATACTTTAAGGTAAAGTGCT EMBV3_02345 AGATTGCCGTCATCTGTGTGGTGGTTCTTTGCATCACAAGGAAATGCCCCCGAAGCAACA Gene GeneID:538354|TMEFF2:NM_001076101:14_cdna Constitutive 0 NULL GeneID:538354 2 GENE TMEFF2 NULL transmembrane protein with EGF-like and two follistatin-like domains 2 EMBV3_06911 TGAGTGATTTTGAAAGGACCAAGAATGTCATAAATCCCCCGTCGCATCCCTGTGGCCTGC Gene GeneID:784675|KIAA1462:NM_001082474:79_cdna Constitutive 0 NULL GeneID:784675 13 GENE KIAA1462 NULL hypothetical protein LOC784675 EMBV3_25098 GGTCCTGTGTGGACACTCCAGGTCTAAGGGGATTAGTATTTTTTCACCTACCTGTCATCC Gene GeneID:617166|LOC617166:XM_002700126:61_cdna Constitutive 0 NULL GeneID:617166 X GENE LOC617166 NULL similar to rCG38917 EMBV3_34830 ACCATGGAGCCTGGAATCATCTTATATTTGTCTGACCCTGGAGCCAGTAAGAGTCCCTGG Gene BVV0101_028968 + 0 NULL GK000011.2:90057599-90507138 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33509 TCATGCCCTACATTTGCCACCAGGGGACGACACTCATCACCAACCTGTCGTCAGTGCTGA Gene GeneID:785824|MGC127055:NM_001080364:234_cdna Constitutive 0 NULL GeneID:785824 5 GENE MGC127055 NULL hypothetical protein LOC785824 EMBV3_31501 ACGACCAAACTGCCACCTCAGGTGACTTTCCTAATGCTGGCCTTGAGAAAACAAGCAACC Gene GeneID:510243|HMOX2:NM_001035087:120_cdna Constitutive 0 NULL GeneID:510243 25 GENE HMOX2 MGC127292 heme oxygenase (decycling) 2 EMBV3_22178 CAACTACTTACAGGCCAGTAAACTTCAGGCTCTGAAAGACATGGAAATGATTGCTAGGCC Gene BVV0101_076190 - 1 EMBV3_23304 GK000026.2:24896346-24945607 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11543 AGGTGTGCCGGCCTGCTCCTGGAATTTAAGAGTTTCTCAGTTACCTGAATATTGGCTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16445 ACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAAGTAG Gene BVT0102_003006 + 1 EMBV3_20607 GK000023.2:27867537-27900051 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00020011 TCONS_00185886 TCONS_00071043 TCONS_00251601 TCONS_00238893 TCONS_00251891 TCONS_00214738 TCONS_00115687 TCONS_00161953 TCONS_00176254 TCONS_00141421 TCONS_00233559 TCONS_00156731 TCONS_00117290 TCONS_00240534 TCONS_00090400 TCONS_00207366 TCONS_00160965 TCONS_00022065 TCONS_00252354 TCONS_00020016 TCONS_00141380 TCONS_00210648 TCONS_00238326 TCONS_00250931 TCONS_00160991 TCONS_00223013 TCONS_00251452 TCONS_00201770 TCONS_00040584 TCONS_00007361 TCONS_00056147 TCONS_00187583 TCONS_00141629 TCONS_00079141 TCONS_00091802 TCONS_00185880 TCONS_00249282 TCONS_00231021 TCONS_00189806 TCONS_00199595 TCONS_00152647 TCONS_00070810 TCONS_00175849 TCONS_00224114 TCONS_00230725 TCONS_00036946 TCONS_00148670 TCONS_00019962 TCONS_00198661 TCONS_00245928 TCONS_00048821 53 XLOC_131641 XLOC_010689 XLOC_111939 XLOC_042816 XLOC_154542 XLOC_145559 XLOC_154832 XLOC_130757 XLOC_069856 XLOC_098837 XLOC_106033 XLOC_085849 XLOC_143041 XLOC_095191 XLOC_071456 XLOC_147198 XLOC_055181 XLOC_125883 XLOC_097858 XLOC_012736 XLOC_155295 XLOC_010694 XLOC_085808 XLOC_129158 XLOC_144993 XLOC_153874 XLOC_097884 XLOC_136319 XLOC_154393 XLOC_123415 XLOC_024400 XLOC_002922 XLOC_033950 XLOC_113628 XLOC_086057 XLOC_048026 XLOC_056573 XLOC_111933 XLOC_152225 XLOC_140510 XLOC_115843 XLOC_121248 XLOC_092412 XLOC_042587 XLOC_105628 XLOC_137410 XLOC_140215 XLOC_021259 XLOC_090550 XLOC_010640 XLOC_120315 XLOC_150855 XLOC_028952 Coding TCONS_00223013 XLOC_136319 NonCoding NonCoding - 7:92166605-92167450 - TSS167011 845 1 TCONS_00223013_1 42 1.01420118343195 1 0 9.88644413762084e-05 0.000177284565412043 2.19030099897358e-05 0.000117967711632636 1.285419115155e-05 1.70290359147559e-05 3.69883347982911e-05 0.000132709942004618 1.15383999657716e-05 4.2854975008002e-05 1.69523627087688e-05 0.000186762592655985 9.3502663421495e-06 0.000121439362634576 3.67818699558392e-05 0.00289410309260668 0.00412401339629732 0.00754376524347487 0 2.93509206793039e-06 4.79010533804789e-06 0.00138222017738551 0.00182686326396122 0.00195144178450413 8.56834313205831e-05 1.09185897006997e-05 6.7250418070516e-06 0.000186371383055408 0.000303069987666269 0.000450184362023937 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 4e-132 475 97.84 0.327810650887574 0 noncoding ATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCCACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGAATCCCTATGATTCGAATGTTGTAGCGTTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTGTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTGTCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCACTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTTGTTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTAGTTTCAAGATTTTGGATCAATTTCACTATCATTATTCGGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGGGCATTTATCCTGTTCCTTTATCTGCTGAGTATTCCTCTGTCTCTTCATCTTGTTTAAATTGCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTCTGTGGAGTTCTCTTTATTGTGGCTTTTCCTCACTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTCCTTTCGAAGAGTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCCGGCATTCAGAAGTTGTTTTGTGGAATTTACTCGACGTTTA TCONS_00217976 TCONS_00217977 . 3' 122766 TCONS_00217976 TCONS_00217977 . 3' 123610 EMBV3_14995 GGCTGTGAGGACCAGGTAAACAAAGTCATAATGTGTTACTGGCCTAAAAGAATTTATGAG Gene BVV0102_336413 + 1 EMBV3_25749 GK000011.2:38150592-38161133 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027590 TCONS_00027585 TCONS_00027594 TCONS_00027589 TCONS_00027588 TCONS_00027592 TCONS_00027587 TCONS_00027593 TCONS_00027586 1 XLOC_015283 Coding TCONS_00027588 XLOC_015283 Coding Coding SMEK2 11:38096094-38155507 j TSS19516 10927 1 TCONS_00027588_18 813 0.189439004301272 16 0.816350232276308 0.000638507225530219 0.00064003024591274 0.000607053414771896 0.000528114684824927 0.000542462195646467 0.000312330874774769 0.000503948374686185 0.000558762472103535 0.00115835399196177 0.000403165986332261 0.000341757039609446 0.000219459754055581 0.000174926719957832 0.000395597111413829 5.18774075564858e-05 0.00119070296923114 0.000295119333141288 0.000928621581644897 0.000431669617471777 0.000197385797244421 0.00011951453608393 0.000478438297067899 0.000539592788378567 0.000577240578090034 0.000347055227642661 0.000217882618201376 0.000277728725393505 0.000205578841494714 9.74208462569686e-05 0.00018495319935395 XM_005212614.1 SMEK2 PREDICTED: Bos taurus SMEK homolog 2, suppressor of mek1 (Dictyostelium) (SMEK2), transcript variant X2, mRNA. 0.0 9187 100.00 0.466093163722888 NM_001282850.1 SMEK2 Homo sapiens SMEK homolog 2, suppressor of mek1 (Dictyostelium) (SMEK2), transcript variant 3, mRNA. 0.0 6017 87.15 0.447606845428754 TCONS_00027588_18 sp|Q922R5|P4R3B_MOUSE P4R3B_MOUSE Serine/threonine-protein phosphatase 4 regulatory subunit 3B; 0.0 1550 95.49 0.998769987699877 0 coding 0 0 1 1 -0.0687310835999451 0.56983403829218 -0.00478575362087624 0.92503825154796 CCTTATCTTCAGACTTTGTGTTCACATGAGCCAATGAGTTCTCTTATCATTTAAACTAAAGTGAATTAGGTTTTTTGGTACATTCCAAGGGGATATGGAAGGAAGTCAAGGAAGGCTCCTCTACATAAATGATAATTGTAGTGACATCTGAAGGATAAAGCAGGAATCATCATGAGATGATTGGAAAGAAGGAAGTTCAGACAAAAATGTCAATTTTAACTTAGATCAAGTAAAACAGGTTGGAAGATGTGGGCATTATCAGGTCTTTAGTGAGTTTAACAAGAGCTTTTTGGTGAGGGCTGAGTGATGGAAACCAGAATGTGTGTGTGTATGCGCATGCACGCGTGCTCAGTCTTTTCAGTTGTGTCCGACTTTTTGTCACCCTATGAACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTTTCCAGGTAAAAATATTGGAGTGGGTTACTCTGCCCTCCTCCAGGGAATCTTCCCAACCCAGGGATCAAATCTGAGTCTCCTGCATTGCAGGCAGATTCTCTACTGCTGAGCCACTGGTGAAGCCCAGAAATCAGAATAGATAGGTTCAATTAAGGAGTGAATGGTGAGGTGAGGAAATGAGTTTGGCTGAAAAGAGGCAAAGAAATAGGAATATCAGTGAAGAAGATACAGGTTATCAGTTTTGATGACTTTTTAAATGGGGATGGCCTTAAAGATTAGTCACCTCAAGGAAAAGCTAATTATACAGCAAAAAACCTCTCATAAAAGTTTTTTCATAAAAATATCCGGGGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCTGGAAATCCCATGTAGGCTGCAGTCCATGGGGTCGCAAAGAGTCAAACACAACTGAAGCAACTTTTACTCTGTAGAGAGAACTATTTCTAATCCTTAAGAATTAAAAAGTGTAATGTACTCTCAAGAGACATTTGGCAAGGATGAGAGATAATTCTGATGATTACAACAGGAGGATGAGGTGCAATACTACTAGCATCTGGTGGGTAGAAGCAAAGAAATGCTGCTAAACATCCTGTGATGCACAGGACAGCCTCTCACAACATAGAATCATCCAGCCCAAAATTTCAGTGATGCCAAAGTTAAGCCCTGCTCTGGGAATTTAACCCACACATGTGTTGACACACATAAAACTACTTTTGTACAATCATTTATTGTTTGAAATTACAAAGTACTGGAAATGACATATGTATATATAGAAGGTTTAAACAAACTAAAGTACACTAGAACACCAGTACGTATGATATTCCATTATTTGTGTTTAAAAAAGAGTGGTAGAAGTAAATGTTACATATATAAAGATACCTATCTATCTTAGCCTTTGGGGTTGAACCGTCCTGAAAAAAATTTTTGCTGGGAAAAACACAGTGTTGCAGTGCATTACTGCCCTCAGTATATTTTAGAGACTCTTGCTCTGGCCTTCTGTCTGTGCTTCTCTCCATGGGATGAGAAATCAGTGAAACCAATGGATGTGTCCAGCTGGAATCCAGATCATGCTCTGGCCACCCTGGAATTCCTTGTCCCAAAGGCCAACCCTGCTCCCAGGGTCTGCACAGTCCTCTTCCCAAATTCTGTCCTCTTGAGGACAGCCAAGGGTGACTACATTCAGGGAGTGCAAACATAGAAATTTGGACAAAAGGTTAGGGTATCCTATTTGTGTACATGAGAGCTGTCAAAGTGCAAGACAGAGCTGAAGTGTTTCAAGGGCCAAAGGGAGAAGGTGGAATTCTGAAGAGTTCAAGAATTCTGGATTTGAATCGAGCTTCCAGACCATATCAATATACATTTCTCAAGGTATGCCAAAGGTAGGAAAAGAAAATACATTTTTATTTAATAGATTGATTTAAAAAATTAAATCTTTAGACATATAGTATACGTTCCTCCATTTGTATGCTTGTCCTGGATCTTACCAATCTTAGAGGTCGGCCTGTTGCAAAAGAGAGAGAGAACCCCTGTGACCTAGAACAAGAAAGAAACAGAACCTGGGCCAGAGGATCCAGCAAGGGTCAGAGATGAGTCCCGAGGGTTTAACTCTGTTCCCTATTTCTCTGTTCCCTTATTTCAGATCTTGGGGAGTATAGCAGAAAAGGGATACTATAGGAAAGATGGAAGCGATGCTTTGAAACACTGCTGAGATCATTTCATTCCTTAGTTCAAAACTCCCCAGTGAATTTGCAACTCATTCAAAGTAAAATCCGAGGCCCCCAAAACGGCCTCTCTCCCACTCCCAACTTTACTTCCCACCACTTCCTCCCTTTCTCACTCCACTCCAGTCACACTGGTTTCCTTGCTATCCCTCTCACTCAGCATGCTACAGCCTCAAGGCTTTGTACTTGGAGTTGCTGTTTTCTGGCTCTCTCTGCCCCCAGGGATTTATGCATAGCAGACTGCCTCCCCTCAGAAGCCTCCCTCAACGAACATTATTACCCTTCCCAAACTCACTCTCTGTCTGCTAATCAATTTTTTTTTTCCTTTGGTCATAACATTTACCAGTATCTAGCATAGATTTGTTTATTGTCTTCCTACACTAGAATGTGGGCTTCCCTTGTAGCTCAGTGGTGAAGAATCCACCTGTAATGCAGAGGACACGGGTTTGATCCCTGGTTCGGTAAGATCTCCTGGTGAAGGAAATGGCATCCTACTCCAGCATTCTTGCCTGGGAAATCCCATGGTCAGAGGAACCTGGCGGGCTACAGTTGATGGAGTTGCAAACAGTTGGACACAACTGAGGGACTAAACAACACTAGAATGGAAGCGCCATGAAAAGAGGAATTTTTTTCTATGTATTCACTGAATGGAACAGTGTCTAGCACATAGTATACACTCAATGAGTGTTTGCTGAATACTGACTAAATACAGGAAATGACTCCTGTGATTTTAATTTTTTCCAATTAGATCTTCTTTATAGGATATTAAGCTCTTAACATATGGTGTCAAAGTGACTTCTATATAGTTCTCATTCTCAGTACATAATCTGCTCATAAATTCTTTTAGGCCAGTAACACATTATGACTTTGTTTACCTGGTCCTCACAGCCTTAAACACCTTTCAAGCCAAACTTCCACTCAGGGATCCTCTAACATCAGGTCCAAAAGTTACCGGTGTGAAGCCTTCTCTGACCTGAGATAGAGATATTATTTTCTCCGGGCTCAAAATGCATTTTGTATTTTGTGCACATTAGTCACGGCAATTAATGTGCTCTTTTGCTACATATATTGCACGCATCTGTGCTCAGTCACTGTCATTTCAGACTCTTCTGTGACCCCATGGACTGTAGCCAACCAGGCTTCTCTGTTCCCGGAGTTTTCCCGGGCAAGAATACTAGAGTGGGTTGCCATTTCCTTCTCCACAGGATCTTCCCCACCCAGGAATCGAACCTGCATCTCGTCTCCTGCAATTCTTTACCCCAGCGCCACCTAGGAAATCCCCAACATATACAACTACTTAAATTCAAGTGTATTTTGGTAGGTTCTCTTTAGAGTAAAAGAAATCCCTATGTAACCAGATTTTGAAATGAGAATTTTTCATCAGGAGCTTACTCTGTGTATGCATGTCACGTGTCAGTTCGTATGCTGGGTTTACGCACAAGATTTGGTAAAAAGAGAAGCACGTTTTGACAACATCATTGGTAAGGAATAACTACAACTCCCAAGATGCGCCGCAGGGTAAAACCTGTCCATCTCGCTCGATTTTCACCCTTCAGACTAAAGGGTTGTTAAGAGCTGGCGGCAGAACAAGCTGGAACTCTCTTTAAAAACAAACAAAAAGAATCTACCAAGAACGAACAGCGACTGACAAACAATACAGCGCACGGCTCGTATCTACCGCGCAGTGTCTGACAATGTGATGTGTGACAACCGACGCGAACGCCCAGAGAATTGCTCCCTCGCTTATTCAGCTCGGAAGACCTCCCGAGAGAGAACGCTAGAAATGCCAGCAAGAGACACTCAAAGATATGGAAACAGTGCTCTTAGATGTGTTAGGAAGGTAGTTCCCCGCCACTTGCCTAAACTTATCTGAAGACTTATGTTCCGAGGTTACCGACGCAGGAAGGACACTGTTTTCAAGAAGCGGAAAGTATGCCAGCCACCAAAAGCTTGACGGTAAAACGCCTGAACGAGAAATAAATTGTCAATGCACTTTTGTACGATGTTATAATCTCCTGGAGATCCACAGAACACTTCCTGAGGAGATGCTTAACTGTAGCAGACTCCTTAGCGAGTTTTAGTGGGTTTCGAGTCCCATTAAAGGGCTAACGTCTTCACAGAAAGAGGTTTAAACTATTTTTCTCTCACAGGCTGAAAGGGCGAGCTTCCATTATGGAGTGTGAGCACATTTCCTTCCCTTCTGCTCACGGTGAGTCCCGTCCAAGGATGCGTACCTCCCAGACTTGCTTCGTTTTTTCCACAGAGCTGGATCCCACGGCTCCTTACACGCCGGGCGCAGCCCCAACAAACCGCCAGAAGCCGAAACCACAACTCCGCTCTCGCCGCCAGTCCGGAGAAGAGTCTCGCGGCACCAGCGGAAACCCGAAGCTCGCGAGAACCGCCCACCTGGCGAGAGCCCACGCCTGCAGGCGGAGCCGAGAGAGGAGGAAGTCGCACTTAGACCCACCCATCTTACTCCACTACCCCTCCTCGCGAGAATACTGAGCACGGCCAACGCGGGTAGCGCGTGCAGAAACGGAGGCGTCACACGTTGGACTCGTCGGCCGCCGTAGCCCCTGCTAGGACAGCCCGTGCGAACCTGCTGGAGGAGGAAGAGAAAGGCAGAGAGAATCGGGTTACAAGATGGCGGGTCTTTAGTAGTTACCGCGACGGCGGTGGCGGCGGCGGCGGGAGAGCGAGCGAGCTCTGGGGGGTAAAGGGTGGGGAGGGTGGGTGCGTTCGGGGGTGAAGTGAGAGGTAACTGGGAATCTGGGCGGCAAGGTCTCAGTGGCTCCTGTTGCCCTTTCCCGCGGCTGAACCTGGGAGCCATGGTGAACTCGGGCCTCTCCGGAGCCGCCGCCGCCGCTGCCGCCACCGCCGCTACCGTCTCTCAAGAGTGAGGGGCGTAAAGGAGGTGAGCAAGGAGGCGGCGGCTGGAACAGTGGGGACCGCAGTCACCATGTCGGATACGCGGCGGCGAGTGAAGGTCTATACCCTGAACGAAGTTCGGCAATGGGACGACCGAGGCACCGGGCACGTCTCCTCTATCTATGTGGAGGAGCTCAAGGGAATGTCGCTGCTGGTTCGGGCAGAGTCCGACGGATCACTACTCTTGGAATCAAAGATAAATCCAAACACTGCATATCAAAAACAGCAGGATACATTAATTGTTTGGTCAGAAGCTGAAAACTATGATCTGGCACTAAGTTTCCAGGAAAAAGCTGGCTGTGATGAGATCTGGGAAAAAATTTGTCAGGTTCAAGGTAAGGATCCATCAGTGGAAGTCACACAGGACCTTATTGATGAATCAGAAGAAGAACGATTTGAGGAAATGCCTGAAACCAGTCATCTGATTGACCTACCCACATGTGAACTCAATAAACTTGAAGAGATTGCTGACTTAGTTACCTCAGTTCTCTCCTCACCTATCCGTAGGGAAAAGCTGGCTCTGGCCTTGGAAAATGAAGGCTATATTAAAAAACTACTGCAGCTATTCCAAGCTTGTGAGAACCTGGAAAACACTGAAGGCTTACACCATTTGTATGAAATTATTAGAGGAATCTTATTCCTAAATAAGGCAACTCTGTTTGAGGTTATGTTTTCTGATGAGTGTATCATGGATGTCGTGGGATGTCTTGAATATGACCCTGCTTTGGCTCAGCCAAAAAGGCACCGAGAATTCTTGACCAAAACTGCAAAGTTTAAGGAAGTTATACCAATAACAGACTCTGAACTAAGGCAAAAAATACATCAGACTTACAGGGTACAATACATTCAGGACATCATTTTGCCTACACCATCAGTTTTTGAAGAGAATTTTCTTTCTACTCTTACATCTTTTATTTTCTTCAACAAAGTTGAAATAGTCAGCATGTTGCAGGAAGATGAGAAATTTTTGTCTGAAGTTTTTGCACAATTAACAGATGAGGCCACGGATGATGATAAACGACGTGAATTGGTTAATTTTTTCAAGGAATTTTGTGCGTTTTCTCAGACATTACAACCTCAAAACAGAGACGCATTTTTCAAAACTCTGGCAAAGTTGGGGATTCTTCCTGCTCTTGAAATCGTAATGGGCATGGACGATTTGCAAGTCAGGTCAGCTGCAACAGATATATTTTCTTATCTAGTAGAGTTTAGTCCATCCATGGTCCGAGAATTTGTAATGCAAGAAGCCCAACAGAGTGATGACGATATCCTTCTTATTAATGTAGTAATTGAACAAATGATCTGTGACACTGATCCTGAGCTAGGAGGTGCTGTTCAGTTAATGGGACTTCTTCGTACTCTAATTGATCCAGAGAACATGCTGGCTACAACTAATAAAACTGAAAAAAGTGAATTTCTAAATTTCTTCTACAACCATTGTATGCATGTCCTCACAGCACCACTTTTGACCAATACTTCAGAAGACAGACGTGAAAAGGATAATGTAGTTGGATCTAACAAAAGCAGCACGATTTGCCCTGATAATTATCAAACAGCACAGCTGCTTGCCTTAATTTTAGAACTACTCACATTTTGTGTGGAACATCACACGTATCACATAAAAAACTATATTATGAACAAGGACTTGCTAAGAAGAGTCTTGGTCTTGATGAATTCAAAGCACACTTTTCTGGCCTTGTGTGCTCTCCGTTTTATGAGGCGAATAATTGGCCTTAAAGATGAATTTTACAATCGTTACATCACGAAGGGAAATCTTTTTGAGCCAGTTGTAAATGCTCTTCTGGATAATGGAACTCGGTACAATCTATTGAATTCAGCTGTTATTGAGTTATTTGAATTTATAAGAGTGGAAGATATCAAGTCTCTTACTGCACATATAGTTGAAAACTTTTACAAAGCACTTGAATCGATTGAATATGTTCAGACATTCAAAGGATTGAAGACTAAATATGAGCAAGAAAAAGACAGACAAAATCAGAAACTGAACAGTAACAGATTTCGCAGAGATGCAAAGGCGTTGGAAGAGGATGAAGAAATGTGGTTTAATGAAGATGATGAGGAGGAAGGAAAAACAGTTGTTGCACCAGTGGAAAAATCTAAGGCAGAAGATGATTTTCCAGATAGTTATGAAAAATTCATGGAGACTAAAAAAGCAAAGGAAAGTGAAGATAAGGAAAACCTTCCAAAAAGGACATCTTCTGGTGGCTTCAAATTTACTTTCTCCCACTCCACCAGTGCTGCTAATGGAGCAAACAGTACAAACAGCAAATCTGTAGTGGCTCAGACACCACCAGCAAGTTCTAATGGATCCTCTTCCAAAACTACAAACTTGGCCACATCCGTAACAGCCACCAAGGGAAGTTTGGTTGGTTTAGTGGATTATCCAGATGATGAAGAGGAAGAGGAAGAGGAAGAAACATCTCCCAGGAAAAGACCTCGTCTTGGCTCATAAAATATTTACTGGGGCCCCTCAACATGTGGTTGAACAAAAATGCTGCAACTGTTCAATGAGCTGAAAATCTGAATCAGAAAGCTTTCTCACTTGAACTTATAAGTATACAAGGAATAGAAAAAGACACTCAGTATATCAGCTAGGAGAGTTTAGTTCTGTAAAAAAACAAAAACAGGCTTCCCAGGAACTTGATCGCTTGCTAGTAATTAAGAGACTTGCCCTTCAGGATGTCAAAAAAAAAAAAAAGTTAGTAACCTGGGAGGTAGCTTCTCAGCAAGGAAACTCTCAGGTTTGGGGATGGTTTAGGGAAGGGATAAAGCTGGTAAGGTATCATTAATGTGGGGTTGCTCCATGGGGGTTTCTGATCTAGAAACAATTACAAAACTTCAGTTGCAAACCCAATAACATTACTTGTATAATGGTGCTGGCCATGTTGTTCTTTAATCAGTTGCCTCTGACTTTTATGGAAAACATTCAACTATCATTAAAAAATGAAGTTAAGCTGTTGGGACCATTTCTTTGAAGATCTAACAAATTCAGCCTTATTGGTAGTTGGAGGGAAATACACCCTGTGTTACAGCACATGTTGAGTTTTCTCCATCAGGAAATTTCAGTTGTGTATTTTGATGAAAACAAGCTGGATTAAAATGGACAGTTTTGTTACTGTAACTTTAAAATCAGCACTTTTAGAGAGAACAGATGCCAAGAATCAGTACAGTAGTATTCCAAAGTGATTTTCTCTAGAAACGGGAGTATATTGAACAGAACGTTTTCAACTGCCTACCAGTACAATCTTGTGGAAGATGCTTTAAAGTCACTTTCTACTTCGTTAGTAAAGGTTTCTCTGAAGAGCTGCAGGCACGTTTTAAGGTGTAATTTATAAAGACTAACATACAAAGAACAGTGCTGAATTAAGTGGCATTTAATATCTATAGGCCATTTTGGTCCAAGAAGTTACTTCAGTGTCAGTCAGTATGCAGCACCTGAAGCTTTTCCATAAACAAGGGTGTAATATGAAAGCTGCTTTTTTTTTTTTTTTTTTTTTTTTTAAGAATAAAAGCACATTCCATGTACGAAAATGAGTTTAAAATAATAAACTGAGGCAAACAGTTAAGAGGTTTTATTTTTAGAACAGCAAGTTAACTAAATATTTTAATGTTAGTTTGCTCATCTGTGATCTGAGATCATGCTGAAGTGAGAAAAACATCCCCCAAACTATAATACATTGGGGGGGGGAAAAAAGACTAAAATTAGTAATTCCAGCTACAGTCTTCAGATCACCTTTGTAATGTGTTATGGGTCCATTTTTCCTGGAATAGCTTAAACTGAAGCAGTTTCCCCTGTTTTGGAGATTTTGTAGTTAATTTTAATTTTGGCTATTGTTTGGAGGATGGGCTGTTGTGTAGATATGAAGTATAGTTTTTCCATAAAACAGATGTTTATTTTGTATTAAAAATACCACTGTACTTGTTTTACACCATTTGTATACATGTGGTGATATTAATGCTGACCTGTAAAATTCAGGAATTAAAATGTGACCCTGTAATTCTATGGTTGCTGCTTTTGTTTGGTTTGTTGTAAGTATAAGTAAACTTCATTTTGAGTTATGTTCATTTTACAGTATTTTTTAAAAGCCAGTATGTTTTCCATAGATACTTATTATAGACCACTGTGTCATAACACCAATCTGAATGAAAGAATTCTAAACAAAGGCCAACCTCACAGTAAATATCGCTGATACTAAGAGAAAGTATGCCTTGGGTCCTAAAGTCCTAGCACCGAAGGATCACAGCATGGGGGCAGTAGCTCCTCTTTCATTAAAGGTGCATATAACGGAAACTCCACCTCGTAACAGTCAAGTGACTCAGGAGAACTTAAACAAATATCAGTAAAGTTACTACAGGAAAACATTTTCTTTCAAGCAAGTTTTATCAAGCTCCTTCCCTCTTCTTAGTTCTTGTTAAATTTCCTCTTAGAATCTAAGAAGCCCAGCCTTAAAACATTTCCCTTTCTACTCTTGATTCTTCCTGGTAAAGTAACTTTGAGTTCCAGTAGGAAGTTTTATCTTTATCTTAGGAAGTTTTTCTTTCTGAAGAACTGCCACAGGTGAAACATGTGATGCATTATTATCATAGGAACCTTTTCTTATAGCATATTGTGAATATTTTCTTGAATTACAGGAAAACACTTTCCATGGTACAGATGCTCAGCCACAGTGAAATGAGAGCAAGACTTAAAAATATCGCTTGAAAGGATAACTTAAGATGGCATGTTAGCTGCTGTCCTAAATGACTACCCTCAGGCAGATCAAGATTTTTTATCTTCACTCAGTGAAGCAAGCCAGAGCCCACATTTGTATGCCTGAGGTTCTCTTAAAATAGTTATCTGTAAACATGTATGCAATATAAAACCTATTTTTAATAAAAAGCTTCATGAAATAAATTTCTGTGTTTCAATCACTAGTTTTCCACTTGTCCATGTAAGCGATGAAAATGTGACATATAAAGTAAGGCTGGGTTTTCTCTGCATGTTGACGGTTGGAACTAAGGTAATTTTGGTATCTCGTTTTGGGTGTTTTTTTGGAGGGGGCCATGCCTTTGGGCGTGTGGGATCTTAGTTCCCTGACTGGGGATGGGACCCACACCCCCTGCATTGGAAGCGTGGAGTCTTTCTAGTGGACCGTCAGGGAAGTGTTATAATCCCTTTTTAAAAGCTTATAACTATAGATATAAGGAAAAATGGAATTATAAATTAAACCTTGGGAGTGGCCTGTAACCAGAAAAGAAGGTGCTTACAGATGACACAAAACAGTTTCTGAAAGGAAGGTTTCTCCTACTATTTTGTGTTAGCTTTTAGCAAATGGACTACATACCACCCCAGGATCACTTCAAACACACAAGACTACACCCATGGCAGAATTCCCCCTCAAAGAGGCTCAAGCAATTGTTTCTTTATCTGTTTTAATGTTGCTTTTCTAGAAAGAGTAACTGAATATTTTGAACATCCCCCACATCTATTTTTGAAGTCCTATTTGCTGCTGCCTCAATGTAGGGTGCTAAATTCTGCCACAGAGAACCACTATTGCATTACATTGATTACCCTATACCTGTTCACCCACACCTACTCTTAACTCACCCAATCACCACACTGCAACTACACATCTTTTTAAAATGGACATTTTGATCATGAAACTTACCTGCTTTAAAATTTCTGTGACTTCCCACTACCATTATAAAATCTTTAAAACTCTCACATTCCCTATAGGCCTTGCAAGTGAGTACCCCACCTATCTCCAATTCCATATGCTAACCTCTTCTCATTGACTGCAGGATCCTGTTTATAACACTGCACTC EMBV3_04179 CTGAACTTGTGACTGGGTGCTGGATGTCTGGGTTGACGCCTTGGCCCACCAGGATGATCT Gene GeneID:790088|LOC790088:XR_084093:118_cdna Constitutive 0 NULL GeneID:790088 27 PSEUDO LOC790088 NULL similar to ribosomal protein S28 EMBV3_02177 ACAGGAAAGCTGAGGACTTCGCCTGCGCTGGTCATCTTCGACGAGACCCTGCAGAAGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09651 ACGTTATTCCCGTAATTGTAGTAATAGGGTGCCTCCCCTGACTGGCTCCTGCTGCATGGT Gene GeneID:504669|CHMP1A:NM_001037584:108_cdna Constitutive 0 NULL GeneID:504669 18 GENE CHMP1A MGC133939 PCOLN3 chromatin modifying protein 1A EMBV3_06674 GTAAGAAAAAGCAAACTGTCATGCTCCCCAAGCTCCCAGGGTTCCATGATGATCCGAGTC Gene GeneID:407998|F11:NM_001008665:10_cdna Constitutive 0 NULL GeneID:407998 27 GENE F11 FXI coagulation factor XI EMBV3_37068 AACCTGTCACTTCCAGAGGAGGTGTTCCCTTCAGGTCAAGGTTGAAAGCTCTGGTAAACC Gene BVT0102_304462 - 1 EMBV3_03948 GK000016.2:22055701-22391084 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06089 ATTCCAGGCAGTGGGTGAAGATGAGGAGGATGACGAAGCAGAGAGCTTGGACTCTGTGAA Gene GeneID:617897|LOC617897:NM_001101268:190_cdna Constitutive 0 NULL GeneID:617897 2 GENE LOC617897 NULL hypothetical LOC617897 EMBV3_13033 CTCCATGGGAGACTGTCGGGGTTGGCTTCAGGATTTCATGGTGCGATGGAAGGAAATATT Gene GeneID:404100|RAET1G:NM_205785:2_cdna Constitutive 0 NULL GeneID:404100 9 GENE RAET1G MHCLA2 retinoic acid early transcript 1G EMBV3_07108 AGTCTATTGTTGTTGTTGCTAAGTCGTGTCTGAGTCTTTGCGACCCCATGGACTGCAACA Gene BVV0102_277203 + 0 NULL GK000018.2:4209543-4445955 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088071 1 XLOC_052858 NonCoding TCONS_00088071 XLOC_052858 NonCoding NonCoding - 18:4226470-4228454 - TSS65417 1984 2 TCONS_00088071_3 75 0.590221774193548 1 0 0.000123438655912034 7.09062410993378e-05 0.000443109280017848 9.62679370545361e-05 4.23044193763556e-05 3.60589974098114e-06 7.34842107944096e-05 1.490603644731e-05 5.9653238046386e-05 0 0 0 0 0 0 0 0 0 0.000553000775520446 0.000815561111423708 8.64509731817091e-05 0 0 0 0.000146671387769096 3.9062603490425e-05 0 0 0 0 XM_584750.6 TRPM2 PREDICTED: Bos taurus transient receptor potential cation channel, subfamily M, member 2 (TRPM2), transcript variant X3, mRNA. 2e-46 192 83.87 0.0882056451612903 0 noncoding 0 0 0 0 -0.784132436084523 0.0666865814436346 -0.359776537675448 0.000715081133212623 GTCCGACTCTTTGTGACCCCATGGCCCACCAGGGTCCTCTGTCCATGGGATTTCCCAGGCAAAAATATTGGGATTAACTGCCATTCCCTCTCCAGGGGATCTTCCCGACCCAGGGATTGAATCCAAGTCTCCTGCACTGCAGGCAGGTTCTTTACCACTGAGACACCAGGGAAGCCATACAGTAAATTCTCAGCTAAAGCAGGAGAAGTGTTAAGTCTTCAACTGTTATTAATGAGACAGTACTACACACCTTCAAGAAATTCTCAAAAACTGCAGAAATATATTGTAAGGTGAGAAATACGAAGGCAAGTTTTACTTTGGGCTAAGTTTTAAATATCGTTCCATTGCTTCTCCTTAATCAATATAAACTGAAAACAGATTTATCTAATTCACCTCAAGAATCTAGTAATGGATTTGGAAGGTCAATTCCAGGTCTCCCAGGCATTGAGTGAATAATAAAGCATGAATGGTCTTCTGCCAATGAGTTCAGGCAGGAAAATAAAACTGCAACTCACTATGAAAACTCAAAGCATGCTCTGAGGTTATGTGGAATTCGAGACTACAGGTGGCTGGGCACAGAGCAGCCCAGGAGAAAAACCAAGAAAAGCTCTCCATAGTACCAAGAAAATGAGGAGCAAAAGGTATGAGATAACTGAGAACAAAAGTGGTTAGTATTGGTGTAATAACTGACGAAATGATGGGTAAATGGATTTTCTTGCATCTAGAATTGCACACAGCTCTGCACAAATTTATTAACATTACATGCATAGCCAAAAATATTTTCCAGTTACTATTATTATATCACAAATCATTCCAAAAGAGTGGCTTAAAGTAAAATTGTAATTATGTAATTAATGGATCTGGCATTGACTGGATTCAATAGACATCATCATCATCGCCGATTCAATGGACATGAACTTGAACAAACTCTGGGAGATAGTGAGGGACAGGGAGGTCTGGTGTGTTGCAGTCCATGGGGTCGCAAAGACTCAGACACGACTTAGCAACAACAACAATAGACTGGAACCACTTGGAAAGCTTTTGCTTGGGTTCTTTCCATGGCCACAGGCAGATGCTGATCACTGTAACAGCTTCTCCACCCACATGTCTGGTGCCCAGGCTGAGAACACTTGAATAGCTGGAGACTGGCCTGTCTGGGGCTCTGTGGACATCCCTCTCTGGGCAGTTGCTCCAAGTAGCCTCTTCATTTGTAGCTGTAGGATAGCAAGTCTTCTCATGTGATGGCCAAAAGCTTTCAGAGTGAGCACCACAAGAAAAAAAGAAAGCATTAGAAGCAGTACTGCCTGTGCACCTAGTCTTGAAGGTAATGCAAAATCACTTTGGCCAGATCCTGTTCACGGAGCCAGTCACAGAGGCCATAGCCATCCCCCTCCTGTGGGGATGTACAGCAAAGTTCTCAAAAAGCATTTGAGGTAGGAAATCCTGTTGCAGCCATTCTTGGAAAATATGAGCTGCCAAAAGCTACTTGGAATAAGAAGACCCCAGTGATTTTAAGAAATAATTTCCAACTTATTGTGAAGAAAGAAAGACTTGGGCATCACAATTCGTTTTCTTTTGTTGCTATAAGGAGATGTCACAAATGGAGTGACTTAAAACATAAATGTATTATTTAGCAGTTCAGAAATGTTTTGGGGTCCCTCCAGATTAAACTGAAGGTAGCATCAGAGCTGTGTTCCCTTCCAGAAGCTCCAGGGGAGAGTCGGTCCTCTTGCTCTAGCAGCTTGTGGTCAAAATTCATTCCCTTGCAGCTGGAGGGCTGAGGTCCCTGTACCAACGCTGGCTTCCAGCAGGGCGCATTCCACCGGGCCAGAGGCCACCCACATTCCTTGAGTCATGACCCCCTCCTCCAGCTTCAGAGCCACCAACAGCTCTTCAGGCTCACGTTCACACCTCCTCTCTTCCACTGCATCTCCCTGACTGACCCTTGACAGAGAAAATCCTCTGCTTTAAGGCTCATGTGATC TCONS_00082114 . 5' 217226 TCONS_00082114 . 5' 217226 EMBV3_39323 AGCGGCCCAGGAAGGAGCAGCAGCGCCGGGGAGGAAAATTCTTCCAAAGATGGTCTCCCA Variant GeneID:533630|PSPH:NM_001046355:362_cdna 181^235 1 EMBV3_32598 GeneID:533630 25 GENE PSPH MGC137208 phosphoserine phosphatase EMBV3_42056 ACATTTCCTACATGGATGACCTCGCTTCCTTCATAGGCGTAAAGCCCAACATCCCACTCC Gene GeneID:539356|FMO4:XM_002694018:2_cdna Constitutive 0 NULL GeneID:539356 16 GENE FMO4 NULL flavin containing monooxygenase 4 EMBV3_23945 TATAAGCATGGACGGCTGCTCTCCAAGCAGAAGGAGAAGATCCGGGAGAAGTTCGTGGAA Variant GeneID:537070|PMM1:NM_001076083:192_cdna 634^825 1 EMBV3_00223 GeneID:537070 5 GENE PMM1 MGC142893 phosphomannomutase 1 EMBV3_36207 GGAAGCAGATGATACCCGTTACACCCAGGGAACAGGTGGTGATGAGGTTGATGATTCAGT Gene GeneID:787773|ZC3H15:XM_002686219:507_cdna Constitutive 0 NULL GeneID:787773 3 GENE ZC3H15 NULL zinc finger CCCH-type containing 15 EMBV3_16297 TTCCCAGAATGAGGTGAATCAGGTGGACTATGTGGGCTACGTGACCTTCGACCTCCTGAA Gene GeneID:282871|MMP9:NM_174744:764_cdna Constitutive 0 NULL GeneID:282871 13 GENE MMP9 NULL matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) EMBV3_41896 AGTATGACGGGATGCTCTACCCCTAGCAGGCCTCTCCTGACACACACATACTCCACGCCA Gene GeneID:509864|PABPC1L:XM_002692468:526_cdna Constitutive 0 NULL GeneID:509864 13 GENE PABPC1L NULL poly(A) binding protein, cytoplasmic 1-like EMBV3_39940 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08273 GAGACTTATCGATTGTCATTACATTTTATCTACCTTCACTTAATACGCTTGAACTGTCGC Gene GeneID:510979|SDCBP:NM_001075483:2_cdna Constitutive 0 NULL GeneID:510979 14 GENE SDCBP MGC128349 syndecan binding protein (syntenin) EMBV3_10271 CGAACTTAAGACTCTCAAATGGATTGAATCAGGCTCTTATAGACACCACATCCGTAACTG Gene GeneID:514610|MESDC2:NM_001034469:36_cdna Constitutive 1 NULL GeneID:514610 21 GENE MESDC2 MGC127121 mesoderm development candidate 2 EMBV3_07555 TGTAGTCTGATGGGCACTGTCTTCTTGCTTCGCTGCTTTACCATGTTTGTGACCTCCCTC Gene GeneID:540644|SAMD8:XM_002698916:121_cdna Constitutive 2 NULL GeneID:540644 28 GENE SAMD8 NULL sterile alpha motif domain containing 8 EMBV3_37913 TCTTCACAGAATGTGATCTGTGTAATTTATGTTCTTCTGAATTGAGGCTTAGTTTGTGGC Gene BVV0102_208517 + 1 EMBV3_11923 GK000025.2:40456326-40643968 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01008 TGATCAATTTGGATGTAAATAATCCTGATTTTAGACAAGCATATTCTTGGTTTTGACACG Variant GeneID:513083|C10H14ORF166:NM_001035280:52_cdna 460^617 2 EMBV3_15273 GeneID:513083 10 GENE C10H14ORF166 MGC127223 chromosome 14 open reading frame 166 ortholog EMBV3_24088 CTGGATCGAAGGGGTATTTTGCCACTGGAGGAAAGTGGAAGTCGACCCCCCAGTACTCAA Gene GeneID:527885|ZDHHC9:NM_001034561:8_cdna UTR3_Alt 2 NULL GeneID:527885 X GENE ZDHHC9 MGC127273 zinc finger, DHHC-type containing 9 EMBV3_04952 TAAAACAAGCCTATGTAGTTCTTAAGGAGGAAGCAAAAATTTGACCAGCTGTCATTCTCC Variant GeneID:613669|TMEM167A:NM_001114511:21_cdna 862^992 1 EMBV3_16580 GeneID:613669 7 GENE TMEM167A MGC139722 TMEM167 transmembrane protein 167A EMBV3_41660 GAAATCATGTAACCTGCCGTATAAATAGAGGCTTCTGTGTGCCGATCAGGTGCCCTGGAC Gene GeneID:404063|BNBD-9-LIKE:XM_002698625:14_cdna Constitutive 0 NULL GeneID:404063 27 GENE BNBD-9-LIKE NULL neutrophil beta-defensin-9 like peptide EMBV3_36836 GCATGTTCAGGAAATGATAGGCTTGGTGCTTGAAACCAACTATAGACAATGGACAATTCT Gene GeneID:537391|DDAH1:NM_001102201:77_cdna Constitutive 2 NULL GeneID:537391 3 GENE DDAH1 MGC165853 dimethylarginine dimethylaminohydrolase 1 EMBV3_01849 GCTCATTTGGAAAAAGAATCCATTGCTCAGGGCATTTGATGTAGAACTGCTTTACATAGC Variant GeneID:506566|ALG5:NM_001142365:49_cdna 676^827 3 EMBV3_01493 GeneID:506566 12 GENE ALG5 MGC137195 asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae) EMBV3_39444 GGTCCTGAACTGCCTCTTGCGTCACAGCAGGATTAAAGATGTGTGGTTTCCAAGGAGACA Gene BVT0102_149444 + 0 NULL GK000007.2:31576856-31688654 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212739 TCONS_00212737 TCONS_00212752 TCONS_00212755 TCONS_00212746 TCONS_00212740 TCONS_00212735 TCONS_00212741 TCONS_00212750 TCONS_00212744 TCONS_00212734 TCONS_00212753 TCONS_00212756 TCONS_00212751 TCONS_00212748 TCONS_00212743 TCONS_00212757 TCONS_00212736 TCONS_00212749 TCONS_00212742 TCONS_00212745 TCONS_00212732 TCONS_00212754 TCONS_00212747 TCONS_00212733 TCONS_00212738 1 XLOC_130249 Coding TCONS_00212747 XLOC_130249 Coding Coding CEP120 7:31601521-31733557 j TSS159550 1741 1 TCONS_00212747_2 348 11 0.986897413564585 0.00912160370754071 0.003685272651498 0.00732496563143293 0.00252221831636703 3.81051733477348e-05 0.00185262380204324 0.00210648204724146 0.000494805577618569 0.000669488118393383 0.000462119376407413 2.59825251309748e-19 8.25051663245944e-11 0.000130276348182895 0.00111296136366858 0.000872973539025662 6.37555481572667e-45 5.45215413926228e-62 2.1175898193744e-49 0.00706964973386453 0.00143608623521722 0.000457843025841183 2.33799826020093e-64 1.92048238285038e-54 3.81156782592776e-47 0.00402916543595368 0.00285013016441473 1.41487860792031e-06 4.08867035087769e-26 4.05427743066091e-47 2.8574449095605e-35 XM_005209109.1 CEP120 PREDICTED: Bos taurus centrosomal protein 120kDa (CEP120), 0.0 1930 100.00 0.614014933946008 NM_153223.3 CEP120 Homo sapiens centrosomal protein 120kDa (CEP120), transcript 0.0 1581 90.64 0.659965537047674 TCONS_00212747_2 sp|A0JN62|CE120_BOVIN CE120_BOVIN Centrosomal protein of 120 kDa; 0.0 726 99.71 0.997126436781609 1 coding 0 0 1 1 -0.168482105682727 0.396880546315933 0.0213493824582497 0.64745921759449 TCTAGTACCGCCAGTTAACAGGCCCCCTCTGGCCTGTACGGGGTTCACGCCCTGGAAAGTCCTCACAGGTGTGAGTGCCCAGCGGCAGCAGTCCACAGAAAGGAGTCTGAGCGGGCCAGAGCAGGACGTCACTCGTTCCCAGGCTCTCAGCAAGGAAAAGCCGGGGGTCCTGAACTGCCTCTTGCGTCACAGCAGGATTAAAGATGTGTGGTTTCCAAGGAGACGCTCGAGTGACTTCTAAGGTTCCATTGGAAGGATCGGGGTATACACTGCAAGGTGCCTGCAGGAGCCTGCAAGGAGATGAAGGCCGAGCAGGTCAAGGTGAAGTGATTCCCTAAGCAGCCAGAAGCAGCAGCATCAGGGAGTTTTGTCTAGGACGAAAAGCAGAGAATACAATACATTCGCATTCCATACTGGGGAAGTTCGGGAAGGGGTTACTGCAGTAGTGCGCCTGCGCAGTTGGTCTCCACCAAGTCGCCCGCTTTCTCCGGTCCGGCTAGCAGGGGGCGCTGTGAGACCCCCGCCTACCGGCCGCCGACTGCGACCATGGTGTCCAAGTCCGACCAACTGCTCATCGTCGTGTCCATCCTAGAAGGTCGCCATTTCCCCAAACGTCCAAAACATATGCTTATAGTAGAAGCAAAGTTTGATGGAGAGCAGTTGGCTACTGATCCTGTGGACCATACAGACCAGCCGGAATTTGCTACTGAGTTAGCCTGGGAAATTGACAGGAAAGCACTTCATCAGCACAGGCTACAGCGTACTCCTATCAAACTGCAGTGTTTTGCCTTGGATCCTTCAACTTCAGCCAGAGAAACTATTGGTTACATTGTTCTAGACTTAAGAACTGCTCAAGAAACAAAGCAGGCACCAAAATGGTACCAGTTGCTGAGTAATAAATACACCAAGTTCAAGTCTGAGATACAGATAAGCATTGCTTTGGAAACAGACACGAAGGCACCAGTGGACAGTTTTAAAGCAAAGGGAGCCCCTCCTCGTGATGGAAAAGTACCTGCCAGCCTGTCTGGACTTGACCCAAAGGACATCGTGGCAGTGCTGAATGAGGAGGGAGGCTACCATCAGATCGGACCAGCAGGGTACTGTACTGACTTCTTCATCATGTCAGTGACCATAGCATTCGCCACCCAGTTGGAGCAGTTAATTCCATGTACCATGAAACTTCCAGAAAGACAGCCTGAGTTTTTCTTTTATTATTCTTTACTGGGAAATGATGTTACAAATGAACCCTTCAGTGATTTGATCAACCCAAACTTTGAGCCAGAGAGAGCTTCTGTTCGTATACGGAGCAGTATAGAAATTCTTCGTGTTTACCTGACTCTTCATTCTAAACTACAGATCCATCTCTGCTGTGGAGATCAGTCACTTGGAAGTACAGAAATACCCTTAACAGGACTACTGAAAAAGGGTAGTACGGAAATCAACCATCGCCCAGTCACAGTTGAGGGTGCTTTTACCCTTGACCCTCCAAACCGAGCCAAACAAAAGCTTGCACCTATTCCTGTGGAGCTGGCCCCCACTGTGGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATGGACGTCCAGATGCTATAAGAAAATATGCAAATTATGAAGAAAAATAGACTAGGAATATCCAAACTGGGAAAGGAAGCTAATTTTTTTTAAAAAAACAACATCACATTTTTTGCTTAATTATGAAGGAAAGTTCTTTGCAAATTATACTTTATTTAAAAATTGTTTT EMBV3_06521 TTGGCCTCCAAGGTCACCAGGCTCAAATCGGACTCAGATTTCACAAGTATGACGGGCCTA Variant GeneID:509758|BET1L:NM_001034362:5_cdna 175^231 1 EMBV3_18075 GeneID:509758 11 GENE BET1L MGC127771 blocked early in transport 1 homolog (S. cerevisiae)-like EMBV3_07862 CCCTCCGAAGTGAACTTGCCACCTACCCAGGTATAACAATTTCTAACATTTGCCCGGGAC Gene GeneID:514044|DHRS7:NM_001046162:112_cdna Constitutive 0 NULL GeneID:514044 10 GENE DHRS7 MGC137123 dehydrogenase/reductase (SDR family) member 7 EMBV3_42365 TGACCCAATGATGTCCTTTGCCGCCCAGCCTAACCAGGGGAGTTTGGTCAATCAGAACTT Gene GeneID:535530|FOXO3:XM_002690117:132_cdna Constitutive 0 NULL GeneID:535530 9 GENE FOXO3 NULL forkhead box O3 EMBV3_40060 TTTCTGCGTCTGGCAAATGGCTTTCCTCCAAAGGCTGGTTCAAATGTCACTGCTGCTCCC Gene BVV0102_265872 - 1 EMBV3_39182 GK000001.2:84633406-84656318 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001426 TCONS_00001423 TCONS_00001425 TCONS_00001427 TCONS_00001424 1 XLOC_000357 Coding TCONS_00001424 XLOC_000357 NonCoding Coding - 1:84636113-84638674 - TSS730 323 3 0.875 0.000404527015637011 0.000744839308939173 0.000193234399028267 0.000348371198522716 0.000228499541635853 0.000188246128172932 5.69317267722684e-167 9.03843144868928e-05 0.000317559488599767 0 0 0 0 0 2.80544171880487e-27 8.1769655889895e-05 0 0 0.00273171001386959 0.00130154710725719 1.67038680657529e-130 0 0 0 0.000746165538996203 0.000184860684552 0.00144607374030163 0 0 0 0 noncoding 0 0 1 0 0.0389631242851733 0.767329183375678 -0.00999019725692504 0.858733239674293 GGGTCAAGCGACTGGAGTAATAAATTCTGCTTTGGGTCAGGACGCTGAGGGAGCAGCAGTGACATTTGAACCAGCCTTTGGAGGAAAGCCATTTGCCAGACGCAGAAAGAAGGAAGCAGAATGCCTTGGTGCCTCTGATTCGGACTCAGTCTCCTGCACTGCGTTGCCTTCCCTGAAGCCTCCAACCACAGCCTGCAGACTGGCACCTGCCTGTTTGTTCCTGTTACATATTTGGCCACACACAGAGCTTCCTTTTTTGATGTCTCCATCTAAACAGACTTCTCATCCACAGTTGCCCTCGACCTTCCCTGCTCCTCTCGCAG TCONS_00001426 TCONS_00001423 s 5' 0 TCONS_00001426 TCONS_00001423 s 5' 0 EMBV3_30503 ACAGCTGCTGATGCTGGGAGCACGAGAAAAACTATATGATGCCATAAAACAGGCAGCCCC Gene GeneID:100297706|LOC100297706:XM_002695543:22_cdna Constitutive 0 NULL GeneID:100297706 19 GENE LOC100297706 NULL hypothetical protein LOC100297706 EMBV3_20337 CAGAGGCCATGGATACTGACAGCTGATTTGTCTGTTTTCTTCTGGCTTTTTCCATGACTG Gene GeneID:508969|PRKRIR:XM_002693473:86_cdna UTR3_Alt 1 NULL GeneID:508969 15 GENE PRKRIR NULL protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) EMBV3_18819 AGGAACCAGCAAAAACCCCATGGACGCTACTGTCCGGAGGAGCTGCAAGATGAAACAGTT Gene BVV0102_071759 + 0 NULL GK000011.2:106291496-106295585 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37436 TTCGCTTCGCAGAGTTGGGCTGACCTATAGATCATCGAAAAACACGCAGGACACAGTCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11811 TAGAGCAGAAAACAGGATGTGGCAACCACCTAGAGATGGAGACTAACGCTGTCTGCTTGG Gene GeneID:529251|KLKBL4:NM_001099044:318_cdna Constitutive 0 NULL GeneID:529251 18 GENE KLKBL4 MGC152318 plasma kallikrein-like protein 4 EMBV3_25177 GATCCAAAGCAGATGAATGTTGCTGCCGCTGTTTGGGCCGTTGTCTCTTACGTCGTTGCA Gene GeneID:540923|PGCP:NM_001076248:76_cdna Constitutive 0 NULL GeneID:540923 14 GENE PGCP NULL plasma glutamate carboxypeptidase EMBV3_13232 TGAAGGATCTCAGAGGAGAAGATGGCTGCTGGTTCCAACAGACGCCACTGAAAATGCCTT Gene GeneID:784541|LOC784541:XR_084716:2_cdna Constitutive 0 NULL GeneID:784541 8 PSEUDO LOC784541 NULL hypothetical LOC784541 EMBV3_25465 CAAGGGTTTCCGCGTCCTGAATGCCTACAGGTGGCTGTGCCCAAAAAGAAGATGCCAAGC Variant GeneID:513780|POLM:NM_001035286:37_cdna 132^315 1 EMBV3_26429 GeneID:513780 4 GENE POLM NULL polymerase (DNA directed), mu EMBV3_19368 AATGCCTGTAAAAGCCCTATGCTTCTTGTCTCTTTCCATACAGGTGGCTCCAAATCTACC Gene BVV0101_015403 + 0 NULL GK000007.2:14083070-14095962 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219099 1 XLOC_132418 Coding TCONS_00219099 XLOC_132418 Coding Coding - 7:14093740-14096811 - TSS163097 3071 2 TCONS_00219099_8 174 0.152393357212634 1 0 4.43037097514873e-07 0 0 0 0 0 0 0 0 1.47377150395469e-05 1.4908400451576e-06 0 1.86863018558918e-06 0 0 0.000595142550831481 2.43276611228343e-05 0.000509281797081731 2.5944918714572e-07 0 0 0.0001957258813689 0.000110530679873511 0.000191065488773472 0 0 0 0.000118331624698274 3.00350046468195e-05 2.9366257465782e-05 XR_231612.1 LOC100140908 PREDICTED: Bos taurus zinc finger protein 14-like (LOC100140908), 0.0 4132 100.00 0.745685444480625 XM_005259781.1 ZNF709 PREDICTED: Homo sapiens zinc finger protein 709 (ZNF709), 0.0 776 73.45 0.423640507977857 0 coding 0 0 0 0 -0.0558903120432981 0.716305362368746 0.082357156879423 0.191516679228563 TCGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAGGCTGAGTGCAGAAGAATTGATGCCTTTGAACTGCGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATTCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATAAGATGGCTGGATGGCATCACTGACTCGATGGACGTGAGTCTCAGTGAACTCCGGGACTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCAATTCAATGGGGTCGCAAAGAGTCGGACACGACTGAGTGACTGATCTGATCTGATGGGAGAAGGTGAGCTCAGGGTCTTCCTACTCTATCATCTTGGACTCTTCAGTTTTCAGGATATTCTTGACTGGCAGAGCAAAAAATGAGGAAAGTAGGCTTGAAGCAAATGCCTGTAAAAGCCCTATGCTTCTTGTCTCTTTCCATACAGGTGGCTCCAAATCTACCTAATACTATTTCACTTTGCATTTCAAGTTACCTGTCTATTCAGGTTTGGTGAATTCTAACATGGGACCATAAAAGCAACAGAGTCTAGAGACTGTAGTTCACATTACTCACATTGACAAAACAGTTAAAAAGAGTCATCTCCAACTCTAGATTTTATTGTCATCACACAGGTCTCTCAATATTCCAGAGCCAAAATCCTAGCCAGAAGGAATGACGAATAACAAAGGACAAAAGATGAAAAGAATAATTCACATGAGACTACATGAGGAACTCTGCATACTTACAAATACATGCCCAACTCTTTATTACATTTCTGTTAGGAAGGAAATGGAACAAAGCTCTTAAGCCAATGAAAAATTTGAATATAATGTAAAAGGGATGTTGAGTACTTGCCACAAGAAACAAGTACCAAAATGTCATTTTTTTGTGTTCCCTTATTTACACAAAAATTACAAAATTATTTAAAAATGAAACCTACTTGTATATTAGAAATACACTTCAAATCACCCATGGATCAGAGTCTTAACAGTAAAAATAAAAAAATTTAACTGATAAAAGGTTAAATTACTTATTAAACTTAGGAATGACAGCCTAAAGAGTATCTACAGAATTATTTTACCTCAATATTTACTTGCAAAAATAAGTAGAATTCCATACTTCAGAGAATAACTTTAAGAGTATGCCACTGGTAGGGAAAATGTATGTTTAAAGTTTATAACATTTCCTCCATATTGTAACTTTGAGAGCATTCTACATGAATTTGCAGAGGCTTACCCATATTACTTACATTAACATGAGTTTTTTCCAGTGCAGTTTTCATATGACTATAAAGATATTTGTTTCAAATTAATAGTTTTACTTTTCATTTCAGTTATATGGTATCTATCCAGTGTACATTCTTACATGGTTTTAAGAATGTAAGGCAAATTAAGGTTTCCATATATTGTTTGCATTTAACAGAATTCTCTCTAGAGGGAGTTCTTTCCCAAGAATATGAGAGAAAATCCCCCAATTTCTCACATTTACATGATGTGCATCATCTTGCATTCTTAAAATGTCATGTGACAAAGGCATTCTAATATTCCTTACGTTCAGTTTGTTAAGAGTTCTTTCATGCATTTGAACATAACAGGAATTGCTGAAGGCTTTACCATATTTTTTTTGCATTCAAAGTAGTTCTCTACAGTGTGAATTCCTTTCTGTATTTAGAATGAACTGAGACAACTGAAAGTTCTCCTATATTTCTTACATTCATAGGCCTACTTTCCATTATGAATGGTCTCATGGTTTTGAAGAGAACTGGGACCACTGAAGGCTTTCCTATAATTTTTACATTCATGTGGTTTCTTACCACTGTGAGTTCTGACTTCATAATGAACTGAAAAACTTGAGGGCTTTCCTACATTTCTTAGAGTATCCAGTGTGCTTCACCACATATCTTGAAAATTTGGTGATAGAACTAAAGGCTTTCCCACTTTCTTACATTCATAGGGTTACTCTCCAATATGAGTTCTTTCATGGTTTTGTAATGAACTGGGACAACCGAAGGCTTTCCCATATCTTACACAAATAAGGTCTGACTCCAGTGTGCTTTATCATGTGTAAATGAAATTTTGAGGGAAAAGTGAAGGCTTTCCCACATTCCTTACATTCATAGGGTTTCTCTCCAGTATGAGTTCTTTCATAACTTCAAAGGGAACTGAAATAAATGATGGCTTTACTACATTGTTTACACTGATAGGATTTCTTCCCAGTATAACTCCTTTCGTGTTTTTACAGGAAACTGGGATAACTAAAGGCTTTACCACACTCCTTACATATATGAGGTTTCTCTCCAGTATGAATTCTTTCATGTTTTTGAAGGGACCTAGGAGTACTGGAGGCTTTATAACGTTCCTTACATTCAAAGGGTTTTTCTACACTGTGAATCCTTTCATGACTTTGAAAGTAACTGGAACAATCAAAGATTTTCCCACACTCCTTACATTTATAAGGTCTGTCTCTAGTGTGCTTCATTACATGTCTTTGAAATTTGGTGAGAGAACTGAAGGCTTTCCCACATTCCTTATATTCATAAGGTTTCTCTCCACTATGACTTCTTTCATGTTTTTGACAGGAATTTGGACTACTGAAGGCTTTACCACATTTTTTACATCCATAGGGCTCTTCTCCACTGGTCTCCTTTCATGGCTTTGAAAGGATCTGGAAAAACTGAAGGCTTTACTACATTGCTTACACGTACAGGGTTTCTCTCCACTATGACTTTTTTCATGTCTGTGAATGGAAGTAGGCCAATTGAAAGTTTTCCCACATTGTTTACATTTATAAGGCTTCTCTCCTGTGTGAGTCCTTACATGTATTTGAAATGAACTGGGAGTAATGAATGCTTTCTCACATTCTTTATATTTATAAGGTCCATCTCCAGAGTGTCTTATCATGTCTGC TCONS_00215536 . 5' 10672 TCONS_00215536 . 5' 10672 EMBV3_38742 CCAAGGTCTCCAAATTCACACTCTCCTCGGAGCTGGAGGCCAGGGACTACCCCACGGAGA Gene GeneID:509866|HIVEP3:XM_002686534:745_cdna Constitutive 0 NULL GeneID:509866 3 GENE HIVEP3 NULL human immunodeficiency virus type I enhancer binding protein 3 EMBV3_26885 CAGTTTCGACAGTGATAGGAGTGGAACAGTGGATCCCCAAGAATTGCAGAAGGCCCTGAC Gene GeneID:508319|SRI:NM_001075350:124_cdna Constitutive 0 NULL GeneID:508319 4 GENE SRI MGC151906 sorcin EMBV3_21192 ACAGAGGTTCTCTTGGCCGTCTGCACCAGCGACTTTGTCGTCCGAGGCTCCATCCAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35604 TCACCCACAGTTGTATCCATGACTGGGGAAAGGAAGGTGCAGGCAGAGGATGAAGCTGAT Variant GeneID:534624|CLIP1:XM_002694485:340_cdna 153^576 3 EMBV3_38654 GeneID:534624 17 GENE CLIP1 NULL CAP-GLY domain containing linker protein 1 EMBV3_43736 CTGCGGTTTATTGGAAACGACAGGATGGCTGTGAAAGCACTGGTGTTAGGCTTCGCAGCA Gene BVV0102_038595 + 0 NULL GK000004.2:64143577-64185798 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184258 TCONS_00184259 TCONS_00184249 TCONS_00181760 TCONS_00184255 2 XLOC_111305 XLOC_110690 Coding TCONS_00184258 XLOC_111305 Coding Coding - 4:64148789-64155874 - TSS137245 3512 1 TCONS_00184258_5 606 3 0.504658385093168 0.0126223715101436 0.00929235074968568 0.0105872513499388 0.0111495242844496 0.00877514341112636 0.00484805043668657 0.0093906806985822 0.0106780586147922 0.0152335118465144 0.000127960037689674 8.07641261440681e-05 5.78216423273008e-23 0.000430685310366671 0.0016016966938771 0.00162941611653323 0 0 0 0.0192319778429872 0.0124390026419834 0.00516029615688883 0 2.4433449232766e-130 0 0.0162145264899244 0.011049964399367 0.00976155966308101 1.65903687040153e-09 7.0354732981769e-07 3.28038416407533e-08 0 coding 1 0 1 1 -1.47748757100076 0.00749178388027531 -0.178551391778881 0.100696394786653 GTAGGAGCTCTTGACGGCGAGGTCGGTCGTGTGTGGGTTGTGTGCGTGGCTACAGAAATTCCCAGTCGCAGATGTCGAGCTAGAGCAGTGGAAAATGAACTCTTCAGGAAACACCGAAAATTTTGAGGGCAGTAACTCCAGATCTTTCTTCTATGTGCACCCCATGGCCCAGCAGCCTTACCTGGGTCCCTGGTACCAGAATCCTGTCTGTAATCCACTCTCCATTCCTGGGGCAGGTTTCACAAATGGAAGTCTGTATTTTCCAGTGGTGCTCAGTGAGTATCCTGCCTTCCTCGTCCCTCAATCCCCATTGCCCACTACTGTTAACCGAAGATCCATAGTCCCTATGTTTTATAACACGGCACAGTTCCGACAGTATGGTGGCTATTGGGAAAAAATGAAAACAAAGGACACGCAAACAGAAGCTGAACCTCAACAGGCTGAAAACTTGAATGAAAAACAAGACATGCACTCAGAAGGTGACAGCCCTGAGGTAGGAAAGGTGACTAGTATTCCTGCGAGTACATCAAACGAAATGATGCCATCGTACGATGTGGTTTATGGTAAAGATATGCCACAGAAGGAGGTGCCGCAAAATGGAATTTCACAAAGTTTCTGTGAGAGTGGAGGAATGCTTTATAACTCTTATGAGGGTAGAGACCGCATGAACTTGGATGAAAAAAAGAAGAGATATTCAGCTCTTTCCCAAAACCCGCCACCTCCGAATGGCAGAGATGATATCCAGAATACCCGGAACTCAAAATTGTACCAGTCTGCTGGAGATATGAACAAGCTTCATCAGGAACGGGCACTCTGCACCAGCATGGAAGCAGTTAAAGACCTGAGCCTATGTTCAGAATCATCTCAGAAGCCCTTTACTGCAGGGGAAAGTATGCCAGAGAACAGTAGCAGGAGCCATGGCTCCCCTGAGACTGTGGGTGAAGAGGTAGAGAGCAACAGCTACCCTGTGATGGCTATCCCGTCCCCTCCCTCCTTGGCTCAGGTCAGCAAAGAAGATGAGGGCATCCAGTGCGACTGGACTTGGTGGACTGAGGTACAGCCTGGGAATTCCCCTGAGTCTTCACCAGGAAGTAGTAGGAAGGGAGCAGAGCAGATGTCAGTGGGGAGCCAAAACCAGGATGAAGTTGATGAAGTGGAGAACAATGGCTGTGAGGGGGAAGTTCCCTCCCCTACCTGGTTGGCCCAGGTCAACAAAGTGGATGAGGGCATCCAGTGCGACATGGGTTACTCTGAAGCTCAGGTAGAGAAATCCCCCCAGCAAATGCCCCCCAGGGGTGAAGAGACAGTATCAGACAGCAAAACCAGGGGATCTTGGGAACAACCAATCACCAATAGGAAATTAAGTGCAGATAAAGAGGAAATGATCATGAATGATGAGACTGGGGAGGTGTATAATGAGAACTTGAAAACATGTGCAAAGATTAAAAAGACCGTGAAAGGCAGGAAGCTGAAAGAGCTGAGCAGTTTCTCAAATGTTAAGACAGCCTATCTGTTGAAGAAAAGTGCCGTCTTGACCATTGTGCTTCCTGAGGATTCAGAAGACTCTGAGTTGGAAGAGGAGGGTGACATGGATGAGGTAGGATGCCTCCTTGAAGAAGTGAGTCCACAGAGTCCTGTGACATCTTCCAAAGGAAGGTCTTATCATGAAGCTGGAAGGATAATCAGGATGCCACCCGAGAGCTCTCTCCCTCCCCAACTTATGGTATGGCCCACCAGAAATAAGTGCAAGTTATTACAAGCTTATGGTGAATGTGAGTGTGTCCCTGCGGTTTATTGGAAACGACAGGATGGCTGTGAAAGCACTGGTGTTAGGCTTCGCAGCAGACCCACCATGGCCAATAAGGAGGGACTGCAGTCCAGGAGAGCCTCTCACAGACCACTGGAATGTAAGTGACTAGTGGACTCATACACTGTTTGGTTGTTTGTGCTGGTTCCCTACTGGGTCCAGGATACAAAGGCAGCCATAAATCAGTATTTCTCTGTTTTGAAAATATGTTTTTGCTTCAGGTATAGGTGCCCATATTCATGTTGAAAGAGAATCCCAAGTTAGAGTTCCTGCACTCTAGGAAATTTCAGTGTAATGTGAAACAAAGTGCTCTGGTAGAAGATGATAGAGAGCTGGGTGGTGGTGGGCTGAGACAGTCAGGACACGGTCTAGATGGATGGCTGAGAACAGGCAGTCCACGTGGACGCAGAGGATTTCACACCAATTGAGGTTCTGTGGTTTGGAGACAAAAGAGGACAAAGTTTGGAGTGGAAATGGAGACAGCAGGGTGGCAGTCAAACAGGCAGTCAGGGCAGGATTCTGCTTGAGACCTTCGTGCCAGAATGGAGAATTGTGAGGAATTGGGAAAGAGGCTAGGAATGTGGTAAAGTACGAGTGTTTCTCTTCACTTACAAATTTTTATCCTGTAGGCAATAAGTGGCTAATTCAGATTGAGTAGAGAAATGAGACAAATCTTTGTCTTCAACCAGTAGTATTTTATAGTAGGAATTAGAGTGGAGAGCACCTATATGGATGAAAGCCTTGTATAAAATCAGTTTTACTCAATAAAAAGTATTGTAATTCAAAAAATCAAAGTGGTGAGGGTCCTAACTCACACGGGAGTAATTAGAGACGGGTGAGAGGACTAACAGTTGAATTTTAAAAGGTTGGAGTTTGAACGTGAGTACGTAGGGGGGAAAATGGTAATCCATGGAAAAGTTATCTTGGGAAGAGAAGTTGTTTTGCTTTGCTGTGTGTGTTGTGGGTGGAAGGAGTGTAAAAAGGTGAGATTGAGGAACTGGACCAGCAGCCCATCCACACCTGGTTGAAGCTTGAGTATGAACCATCCTAGGACTGGCAGGGGCACAGCTGACAGGAGTAGGGACAGGGGGAGCACCCTAAGGACCACTTTGGGAGATGATTACACCTGGCGTGCAAAGAATGACGCAAAGCAGGTGAGTGAAGAATGGGATGCATAAGGGCCCCAGGGAAGTTTAAATAAATCCCAGGCTTAATCCCAAACCTTTAGATTGAAGAAATATTTAAGCCTACCACTTCCACATAAAAATCAGGGTATATTGTTAGGTTTTAAATTCTTGGCTATTGTCTTGACTTGATTCATGCTCAATAATTTGGAGGAAATTTTTTGAAAACAGGGTTCCTTTACAACATGTGCAGGGTTTTCTGGCTTTGATGTTAGTCCTTGCTTATAAAGTGGCAGGAAATGACCTGGGCCAGTGTGCTTAGGGACCCCTCATGCGCATCTGACAGCATCTTGTGAACTCCAGAATGTGAGCTCCTGTTCATGATGTGTAACACTGAAATTATAGTTACATTAAAACACCAACTATGGTACCATTGGTCTTCCCAGTCTTATTTGCCTTTGTATTCCCACGTCATGTCATTGCCCATCAGAGTGTGTATGAATCTTTTTCTGTCTTGGGAAATAGCATTGGTTATAAATTTACTCCTCACTGTGACTCAATACTGGAGAAGGCAATGGCAC TCONS_00181761 r 5' 3921 TCONS_00181761 r 5' 112 EMBV3_04281 GGTGGGTCATCGACAGACTGTCTGAGCACATAGTTGCCTCCCTCTGACTTCAGTTTTTCG Gene GeneID:528167|TNRC6B:XM_002687939:8_cdna Constitutive 0 NULL GeneID:528167 5 GENE TNRC6B NULL trinucleotide repeat containing 6B EMBV3_36942 CCATTGCTGACCTGGACCCCGAATTCTACACCCTCTCGGATGTGTTCTGCTGCAATGAAA Gene GeneID:513276|RBKS:XM_002691453:286_cdna Constitutive 2 NULL GeneID:513276 11 GENE RBKS NULL ribokinase EMBV3_13019 AGTACTCAATATGTACCACCTGGTGTGTCAGCATCAGAGACGGCCACCCGCCCTAGACGT Gene GeneID:515855|CCDC42B:NM_001144873:168_cdna Constitutive 0 NULL GeneID:515855 17 GENE CCDC42B NULL coiled-coil domain containing 42B EMBV3_08746 TCTTTGAAAATGACTGAGCCGTTCATTCCCCTGCGCGGCACAGCCTGGATGATCCCTCTA Gene GeneID:100295355|LOC100295355:XM_002688514:72_cdna Constitutive 0 NULL GeneID:100295355 7 GENE LOC100295355 NULL hypothetical protein LOC100295355 EMBV3_25873 CAACTCTTACTTTCGGTTTCAACGGTGGTAGTTGTGGACAGCCATCTTCACTGGAGGGTG Gene BVV0102_196994 + 1 EMBV3_06975 GK000017.2:57989404-57999615 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075650 TCONS_00075653 TCONS_00075661 TCONS_00075649 TCONS_00075656 TCONS_00075660 TCONS_00075652 TCONS_00075663 TCONS_00075654 TCONS_00075651 TCONS_00075657 TCONS_00075662 TCONS_00075658 TCONS_00075655 1 XLOC_046631 Coding TCONS_00075663 XLOC_046631 Coding Coding CIT 17:57841700-57991177 j TSS56996 8186 1 TCONS_00075663_7 1858 45 0.945536407182424 0.00184446176603015 0.00100714539780841 3.43749380133794e-13 0.000595174932615919 0.0002329978456064 0.000418533294024205 1.06890295815038e-41 0.00097528464712539 0.000288156956234779 2.29464259317701e-05 1.00118155002165e-21 2.22357471026858e-08 0.000103218646751743 6.08030168001625e-07 6.376968552724e-05 0.00196535791375029 1.49240128263221e-11 1.10358701468571e-12 0.000528587219049595 0.00262091912217447 7.87913876216959e-05 0.000728038377579405 0.00136607007356718 0.000741641990154982 0.00127132728927724 0.00169219100406396 0.00130072020292463 0.000104946747059305 2.27180929885641e-08 0.000346958271417513 XM_002694582.3 CIT PREDICTED: Bos taurus citron (rho-interacting, serine/threonine kinase 21) (CIT), mRNA. 0.0 1.420e+04 99.44 0.967749816760322 NM_001206999.1 CIT Homo sapiens citron (rho-interacting, serine/threonine kinase 21) (CIT), transcript variant 1, mRNA. 0.0 9982 87.27 0.967139017835329 TCONS_00075663_7 sp|P49025|CTRO_MOUSE CTRO_MOUSE Citron Rho-interacting kinase; 0.0 3678 97.10 0.9994617868676 4 coding 1 1 1 1 -0.00666621022579278 0.969699998237606 -0.00588456422700955 0.937273855052069 CACCAGATAAAGGTTATTTTTGTCCTGAAAGGCATACTGCAACTGGGGGATCCAAGGACTTGTACTCTGAGATAATATGAGGACCAATTAGATGAAAATATGATTCAGTTTTACCTAGCTGAACTGATTTTGGCTGTCCACAGCGTTCATCAGATGGGCTATGTACATCGAGACATCAAGCCCGAGAACATCCTCATTGACCGAACGGGACACATCAAGCTGGTGGATTTTGGATCAGCTGCTAAAATGAACTCAAATAAGATGGTAAATGCCAAACTCCCGGTTGGTACTCCAGATTACATGGCCCCTGAAGTGTTGACTGTGATGAATGGGGATGGAAAAGGTGCCTATAGCCTAGACTGTGATTGGTGGTCAGTGGGAGTTATTGCTTATGAGATGGTTTATGGAAGATGCCCATTCACTGAAGGAACCTCAGCCAAAACCTTCAATAACATCATGAATTTCCAGCGGTTCTTGAAGTTTCCAGATGACCCCAAAGTTAGCAGTGAATTGCTTGATCTAATCCAGAGTTTGTTGTGTGGCCAGAAAGAGAGACTGAAGTTTGAGGGCCTTTGCTGTCATCCTTTCTTCTCCAAAATTGACTGGATTAACATTCGTAACTCTCCTCCCCCCTTCGTTCCCACCCTCAAGTCTGATGATGACACCTCCAATTTTGATGAACCAGAGAAGAATTCGTGGGTTTCATCCTCTCCGTGCCAGCTGAACCCCTCAGGTTTCTCGGGCGAAGAACTGCCGTTTGTGGGGTTTTCGTATAGCAAGGCACTGGGAATTCTTGGTAGATCTGAGCCTGTTGTATCAAGTCTGGACTCCCCTGCCAAGACTAGCTCCATGGAAAAGAAACTCCTTATCAAAAGCAAAGAGCTGCAGGACTCCCAGGACAAGTGTCACAAGATGGAGCAGGAAATGACCCGGTTACATCGGAGAGTGTCAGAGGTGGAGGCTGTGCTTAGTCAGAAGGAGGTGGAGCTGAAGGCCTCTGAGACTCAGAGATCCCTCCTGGAGCAGGACCTTGCTACCTACATCACAGAATGCAGTAGCTTAAAGCGAAGTTTGGAGCAAGCACGGATGGAGGTGTCCCAAGAGGACGACAAAGCACTGCAGCTCCTCCATGATATCAGAGAGCAGAGCCGGAAGCTCCAAGAAATCAAAGAGCAGGAGTACCAGGCTCAAGTGGAAGAAATGAGGTTGATGATGAATCAGTTGGAAGAGGACCTGGTTTCGGCGAGAAGGCGGAGTGACCTCTATGAATCGGAGCTCAGAGAGTCTCGGCTGGCTGCTGAAGAGTTTAAGCGGAAAGCAACAGAATGTCAGCATAAACTGATGAAGGCTAAAGATCAAGGGAAGCCTGAAGTGGGAGAATATGCCAAACTGGAGAAGATCAATGCTGAGCAGCAGCTCAAAATTCAGGAGCTCCAAGAGAAGCTAGAAAAGGCTGTGAAAGCTAGCACAGAGGCCACCGAGCTGCTGCAGAACATCCGTCAGGCGAAGGAGCGGGCCGAGCGTGAGCTGGAGAAGCTGCACAACCGTGAGGACTCCTCCGAGGGCATCAAGAAGAAGCTGGTGGAGGCCGAGGAACGCCGCCACTCTCTGGAGAACAAGGTAAAGAGGCTAGAGACCATGGAGCGTAGAGAAAACAGACTGAAGGATGACATCCAGACAAAGTCCCAACAGATCCAGCAGATGGCTGATAAAATTCTGGAGCTGGAGGAGAAGCACAGAGAAGCCCAGGTCTCAGCGCAGCATCTGGAGGTGCACCTGAAACAGAAAGAGCAGCACTATGAAGAAAAAATTAAAGTGTTGGACAATCAGATAAAGAAAGACCTAGCAGACAAGGAGACACTGGAGAACCTGATGCAAAGACACGAAGAGGAGGCCCATGAGAAAGGCAAAATTCTCAGCGAGCAGAAGGCGATGATCAATGCTATGGATTCCAAGATCAGATCCCTGGAACAAAGGATAGTGGAATTGTCGGAAGCCAATAAACTTGCGGCCAACAGCAGTCTCTTTACCCAGAGGAACATGAAGGCCCAGGAAGAGATGATTTCAGAACTCAGGCAACAGAAGTTTTACCTGGAGACGCAAGCTGGGAAATTGGAGGCCCAGAACCGGAAGCTGGAGGAGCAGCTGGAAAAAATAAGCCACCAAGACCACAGTGACAAGAACCGTCTGCTGGAGCTGGAGACCAGGCTAAGGGAGGTCAGTCTAGAACATGAAGAGCAGAAACTGGAGCTCAAACGCCAGCTCACAGAGCTGCAGCTCTCCCTGCAGGAGCGTGAATCCCAGCTGACAGCCCTGCAGGCAGCACGGGCGGCCCTGGAGAGCCAGCTCCGCCAGGCCAAGACGGAGCTGGAAGAGACGACAGCAGAAGCAGAAGAAGAGATCCAGGCGCTTACGGCACATAGAGATGAAATCCAGCGCAAATTCGATGCCCTTCGTAACAGCTGTACTGTGATCACGGACTTGGAGGAGCAGCTAAACCAGCTGACGGAGGACAATGCCGAGCTCAACAACCAAAACTTCTACTTGTCTAAACAACTCGATGAGGCCTCTGGTGCCAACGACGAGATTGTGCAGCTGCGAAGTGAAGTGGACCATCTCCGCCGCGAGATCACTGAGAGGGAGATGCAGCTCACTAGCCAGAAGCAAACGATGGAGGCGCTGAAGACCACGTGCACAATGCTGGAGGAGCAGGTCATGGACCTGGAGGCCCTGAACGACGAGCTGCTGGAGAAGGAGCGGCAGTGGGAGGCCTGGAGGAGTGTCCTTGGTGACGAGAAGTCCCAGTTTGAGTGTCGGGTTCGAGAGTTGCAGAGGATGCTGGACACCGAAAAGCAGAGCAGGGCGAGGGCCGACCAGAGGATCACTGAGTCGCGCCAGGTGGTCGAGCTGGCAGTAAAGGAGCACAAGGCCGAGATCCTGGCCTTGCAGCAGGCTCTCAAGGAGCAGAAGCTGAAGGCCGAGAGCCTCTCCGACAAGCTCAATGATCTGGAGAAGAAGCACGCCATGCTTGAAATGAATGCCCGAAGTTTACAACAGAAGCTGGAGACAGAACGAGAGCTCAAACAAAGGCTTCTGGAAGAGCAAGCCAAGTTACAGCAGCAGATGGACCTGCAGAAGAATCATATTTTCCGTCTGACTCAAGGGCTGCAAGAAGCTCTGGATCGGGCTGATCTGCTGAAGACAGAAAGGAGTGACCTGGAATATCAGCTGGAAAACATTCAGGTTCTCTATTCTCATGAGAAGGTGAAGATGGAAGGCACTATTTCCCAGCAAACCAAACTCATCGATTTTCTGCAAGCCAAAATGGACCAGCCTGCCAAAAAGAAAAAGGTTCCTCTGCAGTACAATGAGCTGAAGGTGGCTCTGGAGAAGGAGAAAGCTCGCTGCGCGGAGCTCGAGGAAGCCCTGCAGAAGACCCGCATCGAGCTCCGCTCCGCCCGGGAGGAAGCTGCCCACCGGAAAGCTGCAGACCACCCACACCCATCTACGCCGGCTACCGCCAGGCAGCAGATCGCCATGTCCGCCATTGTGCGGTCACCCGAGCACCAGCCCAGCGCCCTGAGCCTGCTCGCCCCGCCGTCCAGCCGCAGGAAGGAGTCTTCCACTCCAGAGGAATTCAGCCGGCGTCTTAAGGAGCGCATGCACCACAACATCCCTCACCGGTTCAACGTGGGACTGAACATGCGAGCCACGAAGTGCGCCGTGTGTCTGGATACCGTGCACTTCGGGCGCCAGGCATCCAAGTGTCTCGAATGTCAGGTCATGTGCCACCCCAAGTGCTCCACATGCTTGCCAGCCACCTGTGGCCTGCCAGCCGAATACGCCACACACTTCACCGAGGCCTTCTGCCGCGACAAAATGAACTCCCCGGGTCTGCAGTCCAAGGAGCCCAGCAGCAGCCTGCACCTGGAAGGGTGGATGAAGGTGCCCAGGAATAACAAGCGAGGACAGCAAGGCTGGGACAGGAAGTACATCGTTCTGGAGGGCTCCAAAGTCCTCATTTATGACAACGAAGCCAGAGAAGCTGGACAGAGGCCGGTGGAAGAATTTGAGCTGTGCCTTCCCGACGGGGACGTGTCTATTCATGGCGCCGTTGGTGCTTCTGAACTTGCAAACACAGCCAAAGCAGATGTCCCCTATGTCCTGAAGATGGAGTCTCACCCCCATACCACCTGCTGGCCTGGGAGGACCCTCTACTTGCTGGCTCCCAGCTTTCCCGACAAGCAGCGCTGGGTCACCGCCTTAGAGTCAGTTGTGGCAGGTGGGAGAGTGTCTAGGGAAAAGGCGGAAGCCGACGCTAAATTGCTCGGAAACTCCCTGTTGAAACTGGAAGGTGATGACCGTCTGGACATGAACTGCACGCTGCCCTTCAGCGACCAGGTGGTGCTGGTGGGCACCGAGGAAGGGCTGTATGCGCTGAATGTCTTGAAGAACTCCCTCACCCACGTCCCAGGAATCGGAGCAGTCTTCCAGATTTACATCATCAAGGACCTGGAGAAGCTCCTCATGATCGCAGGAGAGGAGCGGGCCCTGTGTCTCGTGGATGTGAAGAAGGTGAAGCAGTCCCTCGCGCAGTCTCACCTCCCCGCCCAGCCAGACATCTCGCCCAACATCTTTGAAGCGGTCAAGGGCTGCCACTTGTTTGCTGCTGGCAAGATTGAGAGCGGGCTCTGCATCTGTGCAGCCATGCCCAGCAAAGTTGTCATTCTCCGCTACAATGAAAACCTCAGCAAGTACTGCATTCGCAAAGAGATCGAGACCTCGGAGCCCTGCAGCTGTATCCACTTCACCAACTACAGTATCCTCATCGGAACCAATAAATTCTACGAAATCGACATGAAGCAGTACACGCTAGAGGAATTCCTGGATAAGAACGACCATTCCTTGGCGCCTGCCGTGTTTGCCTCCTCTTCCAACAGCTTCCCCGTGTCCATCATGCAGGTGAACGGCGCGGGGCAGCGGGAGGAGTTCCTGCTCTGTTTCCACGAATTCGGGGTGTTCGTGGATTCTTATGGAAGACGCAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACCTCTGGCCTTTGCCTACAGAGAACCCTATCTGTTTGTGACTCACTTCAACTCACTCGAAGTAATTGAGATCCAGGCCCGCTCCTCTCTGGGGACCCCCGCCCGAGCATATTTGGAAATCCCCAACCCACGCTACCTGGGCCCTGCAATCTCCTCAGGAGCCATCTACCTGGCGTCCTCATATCAGGATAAGTTAAGGGTCATCTGCTGCAAAGGAAACCTGGTGAAGGAGACCGGCACCGACCACCACCGTGGCCCATCCACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCGCCGACGTACAACGAGCACATCACCAAGCGCGTGGCCTCAAGCCCGGCGCCTCCCGAAGGCCCCAGCCACCCTCGAGAGCCAAGCACACCCCACCGCTACCGCGAGGGGCGGACCGAGCTGCGCAGGGACAAGTCTCCGGGCCGCCCCCTGGAGCGCGAGAAGTCCCCCGGCCGGATGCTGAGCACGCGGAGGGAGCGCTCCCCCGGGCGGCTGTTTGAGGACAGCAGCAGGGGCCGGCTGCCCGTGGGGGCCGTGAGGACCCCGCTGTCCCAGGTCAACAAGGTCTGGGACCAGTCTTCAGTATAAATCTCAGCCAGAAAAACCAACTCCTCATGTTGATCTGCAGGAAAACACCAAACACCCTATGGAACTCTGCTGAAGGGGACCCCAGCGCGCATCTGCTCAGCCAGCCCCCGGCGCAGCTGGACCCAGGCCCGCCTCAGCACGGACTCCCTGCAGCCAGGAGGGGCGGGGGCTGGAGCTCCTGGGAGCTGCCGGCACCTCCCTGCAGCCGCCCTCTTTGCACTTTGTTACTCTTTCAGAGCATTCATAAACTTTTGTACCTAGCTCTAGCCTGTACCAGTTCATCACAGGAAACCAACCTGGGGCTAACTACAACTACAGCGTGGTTAGAATCCTAATTAATAGCTACTTTAAGATCCTAGGGTTGGTTGGCTATTTTTTTTTTTTTTTTAAAGACAAAAGACTTCTTAATAGATTTGAATAGCACCGTATTTCCTGTTGTAGTCATTTGTAGCGAGGTCATACCATCAGGTCTCTGCTACTGAAATGTACGTAGACGAGCCCCTGCTGTCGGCTAACCTCCCGTGCTCACCTCAGTCCATCCCTGTCCAGTCCGTCCTCACAGGTGGCCCTGTCTCACCCGGGGCGACATCTTAGCCAAATGTTTACCGTCCGACTCATTGCCTTTATGGCCTTGATGACTTCCCCTCTCCCACCAGCTGAGAATGTACAGAGGCCACGAGGCCTCGCTCGGAGGCAGTGACTTAGGGCCAAGGGACCTTGAGGAGTTTTCCCTCCCCACCCCTCAGCGTCATCCCAGGCCTGCTGTCCCCGCTTTCCACGTTGCTTTGGCCAGGAAAGCATGCACTGGATTTGCTCTGAGCCCAGCCCCGAGAGGGCCTGGGTCCAGGGGCGCTCACATCCTGTCCACGACGGTGTGCTGTCCCCGCCTCCCTGGGGTGGGCAGAGATGCCGGAGCTCTGCATGGCAGTTCACTGCATGCGCTGCCCCCCGCCCCGACCTGGCTGCCCACCTCGGGTTGCTCCGCCGATGCACTAGGTCCATTCCATAGCTCCCGCCGAACCGAGACCCTCTGGGACTTGCCAACTCACCGGCCACAAGCTGCAGTCTGTAGCACTGAACAAATGAAAACCAAACGCTCAAGCCTTACGACCAGAGAAGGATTTCAGCAAACCACACCTCACACTTCCACGTCTCCCTGACTCCCTCGCGGATGACTCTGTTCACACACAACCCAGCAGGTTCTACCCCACGAAAACTGTGACTCCCCGTACAAGCCTCTCCCTAGGGCTCGACTAACACCAGGAAGTTGGAGAAGGAAACCACCCTCAACTCTCCCACCCCGGCTGGGCGGGGAAGCCCTCGCTTAGGTGCCCCCTTTCTCTCCTCCGGCGGTGTGAGGTTCCTGGCAACTGGTTAAAGAACCAACCAGAGGCTTCGCTGTTGGCAAGCTAACTAGCGGCCTTATTTCTGCCTTTAATCTCCCACCAGGCCTCTCTCGCTTCTCCATGCCTCGAACCACCAAGGCACATCCTAGGTAGGCTGACAGGTAGACCTGTTGCCACTGCAGCCAGTGAACATGACCGCGTTTCAATCCCCCGTCCACGGTTCAGCTCACTTTCCAGATTGCAACCTGGCCCGAGTCCCGGCTCCTTCCTGCTCGTCCCTTAACCGAAGTGCTTTCTTGTCTGAAATGCCCACGGCTCTTCCTCCATGTTGTCGCATCCTTGGCCAGTGTCACACTGTCGTGTTCTGTGTGTTGCTTTGTCTTCGGGGTCAGATTGCATCCCTTCCCTTTTCCAGGGCAGATCTGACTGAATGTTTGCTGAAGTTTTTTTGTCTTTTGGTCCACAAGTATTTGGAGAGGTCACTGGAAATGGTGTTCAGTCTTGGCATTTCATTTAGGATCTCCATGAGAAATGGGCTTCTTAGCCCTCAAAGTGTATATCGTGTGTCTCATTTGTGAAATGCTTCCTGCTATAGAACTAGCTCAAAGACTGTACATATTTACAAGAAACTTTATATTCGTAAAAAAAAAAGGAAATTGAATTGGTTTCTACTTTTTTATTGTAAAAGGTGCATTTTTCAACTCTTACTTTCGGTTTCAACGGTGGTAGTTGTGGACAGCCATCTTCACTGGAGGGTGGGGAGCTCCGTGTGACCACCGAGATGCCAGCAGGAAATATCGTTAAAACGAAATTGCAGTCAAAGGCTTATTAGCATAAGATTCTAGGTCTCCAAAAGTACAGGCTTTTTCTTCATTACCTTTTTTATTCAGAAAGAGGAAAAGATCACAAGGTCCACCTTGAGAGGAATGAACTCTGTTGAACAAATAATCAAATAAAGCAATGATCTAAAATGTTTGCTTTAGTGGACGACCTCTTCTTTTCTTAAAGACAGTGCGTAAAACTCCAAAGTATCGCCACTGTCAGCCTGAGCTTGTGAGCATGGCATGGGGCCGTCTTTCCTTTCGAGGATGCTTCTTCAGGGTCCGGGGGGTGGTGTGTGCGGAGAGCCACACAGGGTTAGGGCAGACCGCACTTCTGGAATTG EMBV3_40809 GACAACTCGAACAGAAATCCAATTGCCAAAGAAACACTGGGGAAATTAACATAACAGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40528 AAGGAGACGCTGCCAGTGAAGCCCTAACACTATAAATCCCTCCTTGGTGGCAAGGGATGT Gene GeneID:505923|FICD:XM_002694541:495_cdna Constitutive 0 NULL GeneID:505923 17 GENE FICD NULL FIC domain containing EMBV3_24022 TGGTTCTTCTAGCTGCCTCACTGCTGAACGGCCAGGACACCAAAATGAGTGCCAAAAAGT Gene GeneID:281658|S100G:NM_174257:2_cdna Constitutive 0 NULL GeneID:281658 X GENE S100G CABP CALB3 S100D S100 calcium binding protein G EMBV3_41030 CACTGCTATGTGATCCAATCCCAGATGACCCCCTAGTACCAGAGATTGCACGGATGTATA Gene GeneID:100297834|LOC100297834:XM_002692378:277_cdna Constitutive 0 NULL GeneID:100297834 13 GENE LOC100297834 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_37513 CCTGGATCCACTGTAGCATTTGCAATCACTGTGCTCTTCCAGATCATTCTTGCAAGGGCC Gene GeneID:511397|ZCCHC4:XM_002688158:40_cdna Constitutive 2 NULL GeneID:511397 6 GENE ZCCHC4 NULL zinc finger, CCHC domain containing 4 EMBV3_06174 CAGGTGTGTTTCTGACGAGAAAGCCGAGAACGAAACTCGAGTGGAGTGCTCCATCATCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14063 CCACGCTCGCATCATCGAGCTGCTCACAGAGGCCCACATTGAGGTCCACATCAAGACGAT Gene GeneID:511925|APBA3:NM_001034414:12_cdna Constitutive 0 NULL GeneID:511925 7 GENE APBA3 MGC128191 amyloid beta (A4) precursor protein-binding, family A, member 3 EMBV3_19090 CAGACTACTACGACTGGGGACAACAAACAGCGAACAGCTTCCTGGCACAAGTAGGAACTT Gene GeneID:613826|GPR137B:XM_002698796:172_cdna Constitutive 0 NULL GeneID:613826 28 GENE GPR137B NULL G protein-coupled receptor 137B EMBV3_25661 GAGACCCACTTCAATCTGACCTCACCCATGAACTATGCCCACACAGCCAGCTCATTCACT Gene GeneID:100337149|LOC100337149:XM_002688903:179_cdna Constitutive 0 NULL GeneID:100337149 7 GENE LOC100337149 NULL proto-oncogene vav-like EMBV3_27497 CGCGCTGGTTTCCGGGCCACATGGCCAAGGGAAAAGCCACCAGGGTGGGCGGCGAGCCTG Variant GeneID:509768|MTG1:NM_001025327:96_cdna 125^523 1 EMBV3_23732 GeneID:509768 26 GENE MTG1 NULL mitochondrial GTPase 1 homolog (S. cerevisiae) EMBV3_22922 CATGAATTCAGATGTAAAGCCCCACTAGGGGCTGGTCGGGTTACCCTCATTCTATCTATG Gene BVT0102_182181 + 0 NULL GK000016.2:30379492-30390091 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18723 GCAGAGATCTTGTTCTTTCACACCTTCAAGCCCAGGTGGCACATGAAAGCAATTTGGCCC Gene BVV0102_035061 + 0 NULL GK000006.2:37119128-37355567 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202984 TCONS_00202979 TCONS_00202980 TCONS_00202976 TCONS_00202985 TCONS_00202989 TCONS_00202982 TCONS_00202977 TCONS_00202974 TCONS_00202986 TCONS_00202987 TCONS_00202981 TCONS_00202978 TCONS_00202983 1 XLOC_124074 Coding TCONS_00202984 XLOC_124074 Coding Coding - 6:37120677-37254577 - TSS152158 1149 1 TCONS_00202984_2 244 6 0.991463715188314 0.00250184648267696 0.000583620356019407 0.00163944134754048 0.00200453837986748 0.000517842763514648 0.000557194052661877 0.000495465440454143 0.0023033624561911 4.80063322445732e-34 0.000776701110811895 0.000683641571588942 2.59206635171894e-120 0.000131152003188917 3.85185819540928e-08 2.10591664095137e-09 1.05628262717972e-41 0 0.000119352902720427 0.00183449383526813 0.00119465358783925 0.000372186430013608 7.17041821549388e-05 2.8355753280189e-105 1.52208039232734e-163 0.0011882302670608 9.94434415169506e-148 0.00132970742573049 0.000103798373268188 1.20342826901214e-179 6.27113871936169e-06 XM_005207750.1 FAM13A PREDICTED: Bos taurus family with sequence similarity 13, member A (FAM13A), transcript variant X4, mRNA. 0.0 1573 99.77 0.76414273281114 XM_005262682.1 FAM13A PREDICTED: Homo sapiens family with sequence similarity 13, member A (FAM13A), transcript variant X2, mRNA. 0.0 1000 81.54 0.894691035683203 TCONS_00202984_2 sp|O94988|FA13A_HUMAN FA13A_HUMAN Protein FAM13A; 5e-144 433 87.55 0.950819672131147 1 coding 0 0 0 0 GGCGGGCCCAACCTCCTTGGAGTCTCAGGGCGTCGCGTGGCTGCTGCTAAGGGCCGGGCTGCTCCAACCTGCAGACTGCTTCGCCCGCCAGCAGGGAGCGGTGCAAGCTCACCTTGTCTTAGCCCTTTTCCCAGTGTCCCGGCTCTGTGGGCGAGGCTTCCCCCCACTCTTACGGGGAATAAAAATCGCACCCTCGGAGGGCTCGCGGGAAAGCTGCGCCGCCTCGGGTGCCTTGAGCGCGGTGCGAATGGGGCAGGGCGAGCGCACGTGGAGCTTGTTTACAAATAGCGGCCCGGGCGTCCGCGCCTCGCAGCGCAGACTCCCGGGAGTCCCCAGCCCGCCCGCCAGGACAGGACGAGCCGGAGCAAGAATCCCGAATCAAGCAAAGTAAAACAGCGGTTCGGCTGAAAGAAGACATGAAAAAGATAGTGGCGGTGCCACTACACGAGCAGAGGAATCCCACCTATACCAAGTTGTTTGGAGTCAGTCTCCAGGACCTTCACCAGCAGGGGCTGACCGAGAACGGTGTTCCAGCTATCGTGGGGAGCATAGTGGAGTACTTGACCATGCACGGACTCACCCAGGAAGGCCTTTTCCGGGTGAATGGCAACGTCAAGGTGGTAGAACAGCTTCGATGGAAGTTTGAGAGCGGGGTGCCCGTGGAGCTAGGGCGAGATGGGGACGTGTGTGCGGCGGCCAGCCTGTTAAAGCTCTTCCTGAGGGAGCTGCCCGAGAGTGTGATCACCTCCACGCTACAGCCTCGCTTCCTTCAGCTCTTTCAGGATGACAGAAATGATGCTCAAGAGAGTAACTTAAGAGCCTTAATAGAAGAGCTGCCAGATACCCACTACTGCCTCCTCAAGTACCTTTGCCAGTTCTTGACGAAAGTAGCCAAGCACCATGTGCAGAACCGCATGAATGTTCACAATCTTGCCACTGTATTTGGGCCAAATTGCTTTCATGTGCCACCTGGGCTTGAAGGTGTGAAAGAACAAGATCTCTGCAACAAGATAATGGCTAAAATACTAGAAAATTATAATACCCTGTTTGAAGTAGAGTATATGGAAAATGATAACCAGAGGTGTGAAAACCTGGCAAGGCTTATCATAGTAAAATTGAGGCATGACTTTGAAGAAGAAATGAAAAAAA TCONS_00202985 TCONS_00202989 TCONS_00202989 TCONS_00202989 TCONS_00202989 s 5' 0 TCONS_00202985 TCONS_00202989 TCONS_00202989 TCONS_00202989 TCONS_00202989 s 5' 0 EMBV3_13817 CCTGAGGTGTAAATGGTTCCAGTGGTATTGGCTGGGTGGTGCCAGGCTTATTTCTAATCC Gene GeneID:519974|NSMCE2:NM_001075797:38_cdna UTR3_Alt 3 NULL GeneID:519974 14 GENE NSMCE2 NULL non-SMC element 2, MMS21 homolog (S. cerevisiae) EMBV3_11843 GCAGTTCTGCCTCCTCGCCCTGCCGAGTTAATGAGGCCATTCCACATCGTTTTTAAACTA Gene GeneID:784484|DENND5A:XM_002693106:499_cdna UTR3_Alt 2 NULL GeneID:784484 15 GENE DENND5A RAB6IP1 DENN/MADD domain containing 5A EMBV3_33864 CCAGGCTCTTCACCTTCCACGGTCACAACCGATCCTGGGAAGGATATTACCACCACTTCT Gene GeneID:617376|APCDD1L:XM_002692267:1591_cdna Constitutive 0 NULL GeneID:617376 13 GENE APCDD1L NULL adenomatosis polyposis coli down-regulated 1-like EMBV3_11124 TGACACAATGATGGCAGCTAGACTGGTGTGAGGTTCCCAGGCTCTGGCTAGACTTGAGTC Gene GeneID:497032|MTHFR:NM_001011685:22_cdna Constitutive 0 NULL GeneID:497032 16 GENE MTHFR NULL 5,10-methylenetetrahydrofolate reductase (NADPH) EMBV3_10248 GGAGATTAATCCCTTGTTGGTTGCTTCATTTCCAGATATTTTCTCCCAATCTGAGGGTTG Gene BVT0101_026351 + 0 NULL GK000003.2:19560566-19598420 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05809 GGAATCCCAGAAGTGACCACCTGCCATTCCCGAAGTGCCGTAACGGTGGATTATATTTTC Gene GeneID:540507|ANGEL2:NM_001099110:99_cdna UTR3_Alt 3 NULL GeneID:540507 16 GENE ANGEL2 MGC155123 angel homolog 2 (Drosophila) EMBV3_35133 TTTTTAATCTCGGGTCCGGAAGCGGGGGGCAAGCCTTCAGCGGGACATAAACCAATCAAA Gene BVT0102_289018 + 0 NULL GK000018.2:63421512-63421901 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27712 GCATTCACTTCCCCCATTACAAAAGGAGTCCCTTGGGTGTGTGAATATGTGTGCCTGTGC Gene GeneID:616293|ERGIC1:NM_001076417:166_cdna Constitutive 0 NULL GeneID:616293 20 GENE ERGIC1 MGC143330 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 EMBV3_25777 ACGAACCAAGGGCGACATGACAGCGTGGGTCGTTACAGAAATAGCTCGTGGTATTCATCT Gene GeneID:617860|SPATS2:XM_002687286:181_cdna Constitutive 0 NULL GeneID:617860 5 GENE SPATS2 NULL spermatogenesis associated, serine-rich 2 EMBV3_36900 AGGCTAGGTCGGGTCCCCTGTGTTTGCCTTTGTTTATTTTGCCAACAGGTTTGGGGCTGA Gene BVT0101_018930 - 0 NULL GK000011.2:45829967-45909257 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00031509 1 XLOC_017757 NonCoding TCONS_00031509 XLOC_017757 NonCoding NonCoding - 11:45894364-45894871 - TSS22508 507 1 0 0 0.00067386044487248 0 0 0 0 0 0 0 0 0 3.52631728997202e-05 0 0 3.22564166855976e-06 0 0 0 0 2.83686268849332e-05 0 0.000190273603515432 0 0 0 0 0.000115565106387246 0 0 0 0 noncoding 0 0 0 0 0.0170504244476195 0.874646614728364 0.0493804375611126 0.482096411119574 CACCCAGATTGATTTCATTTTCAGTCGCTTTTAGCCTTGAAAAGCCCTGTTGCCAACGATACCTGATGTAGAGGGACAAAACACGCCCCAAATTACTCTCATTCCTGCCAAATCCCTTCGGCGAAGCCGAGGAGGAAGCCGGGCCGGGACCAGGCGGGACTCCCCTACCTTTGGGTTCCCCATCCCCAGGCCACACCCCGTAGCCTCTCGGGGGTTCACTTTCTGTGGGGTCAAGGGCAGGAGTGGGCCTGCGCGGGCCCAACGCTGAGGCCTGCTCATCCCCTGCGCATACCCAAACTTGCCAGGCTCAGCCCCAAACCTGTTGGCAAAATAAACAAAGGCAAACACAGGGGACCCGACCTAGCCTGAGTGCCAGAGGTCGCCCCGCGCCGGCTCCCCCTTTGTCCCCACGCGGACGAGCTGCCAGTGAGCCCCAGAGCCCCGGCACACGCGCAACCCTTTCAGGGCGACCGCCTCGGTCCACACACGAAAGCGCTTTGCAATCAC TCONS_00027767 . 3' 1380 TCONS_00027767 . 3' 1886 EMBV3_12927 TCCCTGGAATGACATACGACATTGGAATGGCAACAGTAATGAATGGGAACTTGAGCGAGC Gene BVV0102_120770 + 0 NULL GK000005.2:9977710-10064324 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190879 TCONS_00190880 TCONS_00190881 TCONS_00190889 TCONS_00190884 TCONS_00190877 TCONS_00190886 TCONS_00190887 TCONS_00190882 TCONS_00190876 TCONS_00190890 TCONS_00190888 TCONS_00190878 1 XLOC_116758 Coding TCONS_00190878 XLOC_116758 Coding Coding LOC100849027 5:9999388-10023009 j TSS143150 2371 1 TCONS_00190878_4 610 11 0.90008467400508 0.0199287408419003 0.0309835803698717 0.0123169762507761 0.00743424920468662 0.0143258546620246 0.00472311319066513 0.00863659678535882 0.0103221406120503 0.0179930318525161 0.00195749162764825 0.000219498345864876 0.000702325484600063 0.00171535421736608 0.00407107001977448 0.00311062834251911 0.000113686330552953 0.000324562804945162 0.000751184925855209 0.012390720515849 0.0121301539030838 0.00688327572659075 8.44986350459718e-05 0.000666477209716931 2.10635682286414e-284 0.0175470963988764 0.00874643589256268 0.00853402921614582 1.22857369839213e-09 0.000187249602677726 0.000200297713368184 XM_003586041.2 LOC100849027 PREDICTED: Bos taurus uncharacterized LOC100849027 (LOC100849027), 0.0 3306 100.00 0.772669759595108 TCONS_00190878_4 sp|Q61830|MRC1_MOUSE MRC1_MOUSE Macrophage mannose receptor 1; 2e-10 65.5 29.76 0.257377049180328 2 coding CCAGTCGACTTGTTTTTCCTAAGAGGCCAATTCATGTTCTCCTTCACCGCCCTATCCTTTACTCCCTTCTTCTACGTAGTGTAAGTCTCCTTCAAAAATCGCTGATTTGAGGGACTCACTTCCCACTCCTTTCCCCCTCCCCCCTACTTGCCATTTCCTTGGCGACCATCACTTAATTAACCCAGGGAGAGAGAGGGCGTTGCCGGAGGGAACAGAATCCACCCGAGCAGCTGCTGAAAGAGCCGGAGAGGAGCGAGGGCTGGCTGAGCGGAGAGAAGCACGGAGCAGGCGCGAGCTCCTAGAAGAAAATTGTTTGGCTGTTTGTCATCTGTTGAAAAGTATTGATGTATCCAGTTTTATTGGGTGGACAATATCACGAAGCACTTACTTATCAATGCCTTCATGTTTGGTTGGATGAGCAGTCTAAATCGTAAAGACCTGATTTTAAAGTGATACATGCACAACCTAAGGAATGTTCAATAGTTTAATTTTGAAGCTAAAAATATACATGTTTAATTGAGCTGAATATACTTTTGCAGATGGAGAAATCAATTATTCTACTGCTCTGCATACAATATGTTGCTAAGATCTCAAGAAGTTTCCACTATACACCAAAGAATAAACAAACAGCAGTTTTTATTGAATGGGATGAATTTCCTAAGGGAGGAAGTCCTGAATTTTATTTTTTAAAATACCAACTTGTTAATAATTTTGCTCAAAAAAATGTTCAAAAGATTCTTGCAGAACCACCAAAGTTTCCAAAATCAATACTAACACTAGAAGAAAATGAAGATTATGACATCATTATACAGTCTGTAAAATATGGACAAATTTTAAGTGAAAAGTCATTTCAAACTCGTGGAGTATCAGCTAGAAATATTAAAACAGTAGCAACAAGTACGAGTGTTTCTTTTAACTGGAGTGTGCTATCTTCCAATGATATTTTGGTGTCAATATCGCTTAATAATTCTTCACAAATTATGCATAATGTCATGTTTTATGAGTGGGATGACTTGAAACCTGCCACCTTATATGTTTTTACACTTGAATTTAAACAGTTGCATTTGGATTTTATAAATATACTTCAGAGATTGGATATTCAAATTGAAACAGGTTCATGTTCACAAGGATGGGTAGCATTAAAAAATAGCTGTTATAGAATTAGCAAAGAGAGTAAGCCATGGAATATAGCCCAGCAATATTGTAAGCTGTCCTTAAGTTCTGCACACCTGGTGGATATAAAAAATGAGGAGGAAAAAAAATTTGTATTTTCACATCTCAGGTCAAAGAATCAAATAATAATATGGACTGGTCTTAACGACTTTAAGAAAGAAGGTCATCTCACATGGACAGATGGATCATCTTTTGACCTTAAGGAAAATGAAATACTTTCTTTCCCACTACTACCCAAGAATGAAACAGATTGCTACATTTTACAGCAAAACTCAACTGGATCAAACTATTTCTTTACAGGATTTTTCTGTTATATTCCGTTGCCATATATTTGTGAATATGAATCACCTTCTCTGCAAGAAGACCTTTTGTTCTATATAAAGGATGTTGGAACAACTGAAGTTGTATTTAGTTGGAATAATTTGAGTGCTTGGAATAATTTGAATAAGTGGCTGAAACTTGGGTATAAAATTATCATTAAGTATTATTTAGATTGTACAGAAGAGCAACATTTTGAAAGCATGCCCCCAGATACTACAGAGAAAGCAATTACACAGTTGTATCCTGGCCGTGTTTACAGATTTTTATTCTCTGCAATAAATGAATGGGAGGCAAAAACTACTTTAAGTCCAGTATTCGTTGTTGAAACACGTCCATTATCACCCCAAAATGGCACAGTTACTTATGTGACCCCAACGGAAATATTTTTACACTGGGATGCTCCAGATCCTGTATCTTTTGACCATTATCTTGTGGTTATTTTGGATGCTGAAAATGCTAAATCAGAAGAAGTGTTTGTTGAAAAACCCAACACATCCACAACAATTGGAAATCTCAAATTTTTCCATCATTATCTGATCTATCTATTCAGTGTGGCAGAAAGAGGAACTCTAAGCTACTTTGAGAAACCTATTTCAGCCATTACAGGTATTAATCCACCTCAGAAAATTTGTGTAAAACCTGAAGATGTGGATGAAGACAGTATAATTCTCCAGTGGGAGCCCCCACAAGATAGCCATGAGGTCTACATTCAAATCAAATCCATAGCAGATACACGAGAAATCAGGAAGCTTTTTGTAAAGGATGCTAATAGATGCAAGATTGATCACTTAATCCCTGGAATGACATACGACATTGGAATGGCAACAGTAATGAATGGGAACATGAGTGAGCTGGTAACTATTCAACAAACTCTAAG EMBV3_36742 CTTCCGCATCGTCTCATTCCCTCACACGTGCAGGTTAAATACCTTCCATTCTGGGCCAAG Gene BVV0101_003178 + 0 NULL GK000015.2:45658101-45663895 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061420 TCONS_00061423 TCONS_00061429 TCONS_00061431 TCONS_00061421 TCONS_00061422 TCONS_00061425 TCONS_00061433 TCONS_00061427 TCONS_00061424 TCONS_00061426 TCONS_00061428 TCONS_00061432 TCONS_00061430 1 XLOC_036980 Coding TCONS_00061430 XLOC_036980 Coding Coding PPFIBP2 15:45661303-45833265 j TSS45723 5648 1 TCONS_00061430_6 862 0.0571883852691218 24 0.967294909892359 0.000190743204239749 4.81349062241116e-55 0.000118753367030212 9.97750046388592e-05 1.35747746822016e-27 8.07656798104936e-06 3.10145954154142e-28 1.30150165209987e-05 0.000438414214819078 1.61762100138219e-06 1.92647841990623e-106 3.33873354083446e-42 2.31607879974085e-05 1.36879941493149e-42 2.28552818278194e-149 2.63251548521274e-107 1.84255632476722e-45 6.12181031580906e-143 2.10412165430923e-05 0.000214863960340341 4.49037695065313e-14 1.43439259940763e-45 5.46242378762531e-74 2.09490401860357e-21 0.000466074852530601 2.25992118759228e-05 0.00018959582516513 2.02498502804323e-06 7.86311254844800e-09 1.87924240837779e-173 XM_003586954.2 PPFIBP2 PREDICTED: Bos taurus PTPRF interacting protein, binding protein 2 (liprin beta 2) (PPFIBP2), mRNA. 0.0 7048 100.00 0.691749291784703 XM_005253177.1 PPFIBP2 PREDICTED: Homo sapiens PTPRF interacting protein, binding protein 2 (liprin beta 2) (PPFIBP2), transcript variant X4, mRNA. 0.0 2998 85.01 0.458392351274788 TCONS_00061430_6 sp|Q8ND30|LIPB2_HUMAN LIPB2_HUMAN Liprin-beta-2; 0.0 1466 85.91 0.948955916473318 3 coding 0 0 0 0 0.571063164087138 0.0446640623338126 -0.0798016643846773 0.25177176013119 CTGGGAGCGGGCGCTTCGGGACGAGCCTCCCGAGTCTCCCGTGGGTCCCCGCCCCCGTCACGTGGGCTCCGGACGCGGCCGCTGCCGGTCGGTCCGCTGGTTGGTCAGTTAGTTGGTCGGTGGGTCAGTGGCCTGCTACTCGTTTCTCGGCTCTCATGTTCGGAGGTTGGGGGGGACAAGTGAAAGGCCCGCACACCTGAGCTGTCCGGAGAGGAGCCCAACACTCAGTAGAAGGAGACAAAGGAGAGAAAAGGACTCATGGCTTCTGACGCCAGTCACGTGCTAGAAGCTGCCCTGGAGCAGATGGACGGAATCATCGCAGGAACTAAAACAGGGGCAGATATTAGTGATGGTACCTGTGAGCCCGGACCGACTTCCCCAGGCTCCTACATGAACCCCTTCCCAGTGCTCCATCTCGTCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCATCCTCAGGAGAGGGCAGCCCTCCTGAGCCAGATCCCGGGCCCCACAGCTGCCTACATAAAGGAATGGTTCAAGGAGAGCTCGTCCCAGGTAAATCACCACAGTGCTGCCGGTAATGAAACGTATCAGGAACGCTTAGCACGCCTAGAAGGAGATAAGGAGTCCCTCATATTACAGGAGCTACTAAGTCGTACATCTCTTGAGACCCAGAAGCTCAATTTGATGACCGAAGTGTCTGAGCTGAAGCTCAAGCTGGTGGGCATGGAGAAGGAACAGAAAGAGCAGGAGGAGAAGCAGAAAAAAGCAGAGGAGTTGCTTCAGGAGCTCCGGCACCTCAAAATCAAGGTGGAAGAGTTGGAAAATGAACGGAATCAGTATGAATGGAAACTGAAGGCCACCAAGGCTGAGGTAGCCCAGCTGCAAGAGCAGGTGGCCCTGAAGGATGCAGAAATTGAGCGTCTGCACAGCCAGCTGTCCAGGTCAGCAGCTCTGCACAGTGACCACGCAGAAAAAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTTGTTGCCAATGAAGACAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGAAGGGTGAATGAGATCGTGATGGCAACCCAAGGGCCTTCAGAAAGAACTCTCTCCATCAATGAGGAAGACCTGGAGGGAGGTTTCAGGAACTGGAACACTGCGAATAAAGGCCCCGAAGACCTATTTAAATCAGAGGTGTCTCCAAGAGGCAGCCCTCCCACGGCGGGGCCACCCCCACTACCGCAGAAATCACTGGAAACCAGGACTCAGAAAAAACTCTCCTGTAGTCTCGAAGACTTGAGAAGTGAATCTGTGGACAAGGATGGCCCTTTCCTGGCGGAGCACAAGTACCCCACATTACCTGGGAAGCTTCCAGGAGCCACGCCCAACGGAGAGGCTGCCAAGTCTCCACCCACCGCCTCCCCACTGGACCCCGCAGGGAGCAGCCCGCTGAGGCTGAGAGACACAGAAAGTGGCTGGGATGACACTGCCATGGCCAATGACTCATCCATGTCATCGGGCACCGAGTCCAGCCCCCAGTCTCCCCTGACACCAGATGGTAAACGGAGCCCCAAAGGCATCAAGAAGTTCTGGGGAAAGATCCGAAGGACTCAGTCAGGAAACTTTAACACCGATGCTCCAGGGGTGGCCGAGTTTCGACGAGGTGGGCTCCGGGCAACTGCAGGGCCAAGACTGTCCAGGACCAGAGACCCCAAGGCTCAGAAAAGTGACGCCAACGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTATGCACGTGGCTGGAGGACTTCGGCCTGGCTCAGTATGTGATCTTTGCGAGGCAATGGGTGACTTCTGGCCACACTTTACTGACAGCTACCCCTCAGGACATGGAAAAGGAGCTGGGAATTAAGCACCCCCTTCACAGGAAAAAGCTGGTTTTAGCAGTGAAAGCCATCAACACCAAGCAGGAGGAGAAGTCTGCACTGCTGGACCACATTTGGGTAACACGTTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCCAGAGTCGACGGGCGGATGCTGCAGTACCTGACGGTGAATGATCTCCTCTTCCTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCACGTCAACAAGTTCAACCCTCATTGCCTGCACCGGCGGCCGGCTGATGAGAGTAACCTCTCTCCTTCAGAAGTTGTGCAGTGGTCCAACCACAGGGTGATGGAGTGGTTGCGGTCCGTGGACCTGGCGGAATACGCGCCCAACCTTCGTGGGAGTGGCGTCCACGGAGGGCTCATTATCCTAGAGCCACGCTTCACAGGGGACACCCTGGCCATGCTTCTCAACATCCCACCACAAAAGACGCTCCTCAGACGTCACCTGACCACCAAATTCAATGCCTTGATTGGCCCTGAGGCTGAGCAGGAGAAGCGAGAGAAAATGACCTCACCTGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAGCTGGGATTTTCACATTTTGGAAACATAAGAAAAAAGAAGTTTGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGCAACAGTGTTGGTGACGGTCACAGGGCCTACAGTGGCACCCGGGGCCTCAGCACACTTGATGCCCCTGAACTGGACGGGTTGGACCAGATGGCACCTTCGGAAGGCACCGTGACGCAGATAGGGCTCCTCTCCCAAGACATTCACCGCCTCACGACGATGCTGAGCCAGGACCAGCTGCTGACCGACTCCTGCCTGGCCACTCCCAGATCTGAGGACTGGAGATGACTCTCTTCATGGCTGGCTGGCAGCCCAGAGAGGCACGTGTGTGGGTCCCAAGTCCGCTTCGATGGGAAGCTGGCCCACAGCCACCCACAGAGCCCAGACTGGGCCCCAGGGCGTCTCTGACGTGGGTGCTGACAGGACAACGCGAGGCTGTGGAACAGATGTCCACGAGGTGGCCCACAGGTTTCCAGCTGTGCTGTGCTCTCCACCACAGCTTTTGTATTTTTGTAAGTGCACTGTAGAGCGCTTTTGCAGGGAGGGCAGTGAGATGCCCACGCACACTCAACGACTCACGCCATCCCTAGCGACAGCCGGGGGCTCTTACACCAAAGGGGAAGGGCTATGAGTCACAAAAGCTTTGCTGGAAAAAAAAATATGGAATGTTCTGAGCTGACGGAAGGGGTAGGAAGCCCCCTCCTGGGATGCTTCCGTATGAAAGCTTGTAGTGCATTTCCGTTCCCAGGAATCTGGCGGGAGTGACTGACAGCAAGGAAGGAGGAATGGACTTCCTTGACAAGGCTGCCCTTTTCTGCAGTGGTGTCTCAGGTTCTCAGGGCTGCGGGGCCTCCCAGCACCTGAGCAGACATCTCTACTTCCCTTCCCTCGTCAGCCTAAGAGGCAATTTATCTGATCAAACAGCTCCCTCGAGTGGAAGGCCCTTTCCACTGCAAGACATCTCAAGTATGTCCTACCTCAGGGAGAGGCGCCTGCTCAGCAGCCACACCTCACCCTCCCAACCAGCCTTCTCCCCCCACCACCCCCACCCCTGAGCAATGGCCCTAACTCCTCCCTGTGGCGGCTCTAGCTCTGGCCTCATCTCTCTAACTTCCTCGGCAGGGGGTCTCCCACTTGGTCCCCTCCAGGTGTTCTCTGCACCATCCCTGCAGGTACTGTTTTCATCCTGCCAAGAACTCAGTTCTGCAACCACCACAGATTAGCATTCAAAAGCCTTAGCACCCAAGACCCCTCTGAATCATCAGCATTCATGAACCCATGCTCTAGCCATGGCTCCTACTGTTCCCTCTCCGAAATGTATTTTTCTCCTCCGCCCTGTCACGAGGCTGAATCCTGTCTGCCGAGGTTCAGATCAGCCCAGCCTCTTTCAGGAGGCTTTCACTGAGGGTTGGAGGTCCGCACGCCATGGTGCTGTCTGACCTGAGCACCTCCTGGCTCTCCTTGAAGTGGTGTGGCACCTTTCTGCACCCGTGCGCAGCACAAGCTCACTGAGCATCTGCTACGGACAGGCCCCTGCAGACAAGAGTAAGAGCCTTCCGCATCGTCTCATTCCCTCACATGTGCAGGTTAAATACCTTCCATTCTGGGCCAAGGAGCACTGGGGATACAGGGGTGAATGCCAAGGTCTTTGCCTGAGGGTGTGGATGGTCCAGTGTGGGAGTACAGGTCTGTTTCAGACAAGAGCGTGTGCTGAGCGTTACAGAGGCTCCAATAGAAGTGTCTACAGCCCCAAACAGCAAATTGTCATTTTTAACGGAGCACTGGGGAGGGGGACTGAAAAGGCTCCAAGGAAGAGGTGATCCTTGAATTTTTGAAAGATGAGTCAGGGCCAAGTATGCCAGAGGGGAAAGGCACTCCAGGCGGATGGACCCGAACCATCCCAGCACGCCCAAAGAGGTACCTGAAGTTGGTATGACAAGAGCAGAGCTTCTTGACCCCTGCACCGCGGTCTGGCAAGTCACTGTGCTGGGGCCATCCCGTGTGCTCTAGGATGTTTAGCAGCATCCTTGGTCTCTCCCTCTAGATGCCAATAGCTCCCTTCTAGTTGATGACCACTGGGCCAGAGAAGGAGGCCCAAGGAAGGAAGGAAGGATCTGGTGAGGTCAGCTGGAGCCCAGATCAAGAAAGGCTTTGTAAGCCAGCCTCCTGGAATTGACCTTGGAGACACACGGTGTCCAGGGAGGGAGTACTGAAAGCAATGAGAGGCTTAAAGCAGGGGACAGGCATGGTAATTTGTGTTTAAAAGAAACGTCTGAAGGGAGGACCTACCTTACTCATCGTGCAGTGCCCAGCACTGTGTCTTTCTCTGAGTAGGGACCTCACTGAGGATGAGTTCAACAGGTGGATGGATGAAAGCTAAGCTGCCACCATCTCCCCCAGCCCCCACTGGCCCTCTGAGAGACTGACCTGTGTTACGCCACCTATGAATACTGCACCACTGTACTTCAGAGAATTCTCTTGAGCTGTCTTCCTCTCTCTCTCTCCTGTATCCCTTCACTCTGCCCTGCTACCCACATATACACGTCGCATAAGAAATCCAGTGACATCAAGTTCAAACAATGTTACTACTATGCCAGTTTTTGCAAAAAGTGAACAACTTGGAGTTAAACTTAAGTTTGAAGCCCAGCTCTGCCACCTACTGGCTGAATGATCTAGGGACAACAGCTTCATGTCTAAGTTGCCACGTCTGTAACTTGGAGAACAAAATCCGCATGGGATTTCTGGCTCAGCAGAGGGGAGCGCAGCCAAGATGGCAGAGTAACAAGACCCAGAACTCACCTGCTTTCACGAGCACACCAAAATCACATCTATCTGCAGAACAGCCATCGATTTAAAAAAAAGACCGTAGAGACTTTCTACAGTTAACATAAAGAAGGAACCATGACAAAACAGGTAGGAAGGATGGACTTGCAGTACAATCAAATCCCATACCACCTCCCCGGGGTGGGTGACCCACAGACTAGGGAATAATTATGTTGGATTCTCCCACAAGAGCAAGAGTTCTGAGCCCCACGTCAGGCCCCCAAGCCCAGGGCTCTGGTCAAATCTCTTCAGAGCAGCTATTTCTG EMBV3_28900 GGGACTATGAGAAAATGGTCGGGCAAACGAGGAGTTGGAGAAGGAGCCGAAGGAGGAGGT Variant GeneID:524676|DPY19L2:XM_002686819:69_cdna 162^255 1 EMBV3_28372 GeneID:524676 4 GENE DPY19L2 NULL dpy-19-like 2 (C. elegans) EMBV3_00076 CACTGGCCTTGGACTGATTTCTTCCGATCACTCATAGCAGCCATCATCTACCTGATCACC Gene GeneID:767950|MGC133647:NM_001077021:34_cdna Constitutive 0 NULL GeneID:767950 24 GENE MGC133647 NULL hypothetical protein MGC133647 EMBV3_09816 AGCCTGACTAAGCCTGGATTCTAACTCAGACAAGATGTTTCTTTGGGGCACAAGTCCACC Gene BVT0102_160907 + 1 EMBV3_43045 GK000020.2:25523383-25588626 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116593 1 XLOC_070759 NonCoding TCONS_00116593 XLOC_070759 NonCoding NonCoding - 20:25544079-25545092 - TSS87061 1013 1 TCONS_00116593_1 37 0.604146100691017 1 0 0.000376069827028442 1.98389606647392e-05 9.1352358595525e-06 0 1.46214619353897e-05 6.7091848325978e-05 5.75687398490149e-06 0 1.55777581868137e-05 0 0 0 0 0 0 0 0 0 2.12367426780312e-05 2.83965901562373e-05 0.000305670254460045 0 0 0 0.000123112067506148 0.000146056092678642 0.000190871030557053 0 0 0 XM_594211.5 LOC516074 PREDICTED: Bos taurus nuclear pore glycoprotein p62-like (LOC516074), mRNA. 2e-23 114 73.71 0.189536031589339 0 noncoding ACATCCTGCCCAGCCCCACCTGAGAATGACTACAGGCAGGAAGAAGTTACCACATCCCCTCCAGAGGCTGACCAGGCCCAGAACTAGAAAATGTTTGAATTCACTTCTTCCCTTTTTAGTATAAAATCAGGCTGAGGACTTCCCTGGTGGTCCAGGGCTCGGCACTTCCAATGTAGGGGGCCCAGGTTCAATCCCAGGTCAGGGAGCTAGATCCCACAAGCTGCAACTCAGAGTTCGCATGCTGCAACTGAAGATCTCGAATGCTGCAACTGAAGATCCCACGTGCTGCAGCAAAATTTGAAGAGCCTGTGTGCCTCAACTAAGACCTAGCTCAGCCAAACAAATAAATATTAAACAAACAGTAAGAAGCCTGACTAAGCCTGAATTCTAACTCAGACAAGATGTTTCTTTGGGGCACAAGTCCACCATCTTCTCCATTTGCTCTCTTTCTGAAAAGTCACTATTCCAACAGTTCTCTCAATTTACTGACCTACTGTGCATGTGGGGAGTTGTAGGAACTTGGATTGAGTAACATTTTAAGCTATCATTGGAATGGTAGGTTTCCCCTGAGTTTTCTACTCCCTGGCCTCAGCACTGCTCTTCATCCTTCCCCTAGCTCCTAAAAAAGAAAAAATAAGCTATCATTGGAGACACACAATATGCTTGTTTGTCTCCAAACACATTGTAGGTGTTTGTTTTGCTTCTAGGCGTCATGGGTCTCTGTCTTTCCAGCTTTCAATATCACTTTCCTCACTGCTTGATGCCCAACCACTAAACCAATGTCACAAGTGTGGAGTTGTCATTTTCAGCTGCACTCCACTTCCAGTATGGAATGTGCAATGGCTTAAAAAATAATAAAAGTTTATTTCTCAGTCAAAAGTCCAATGAAAGTGTTCTTGATTGGTGGGAGTTTTACTGTAAGTAAAACTGTAAGTAAAGCAGCACTGTAAGTAGCGTTTCTGGAATTCTTGTGGGTCTGCCCTCTTTATCATAAGTTTTCAAAGTCGGCATGC TCONS_00114858 . 5' 20386 TCONS_00114858 . 5' 20386 EMBV3_42471 GGCTGCAGCAACTGGTGTTGCTTATTCTGGAAGGAAGTTAGAAATTGTGGCCGCCTTCTG Gene GeneID:534107|PRKAB1:NM_001024558:237_cdna Constitutive 0 NULL GeneID:534107 17 GENE PRKAB1 NULL protein kinase, AMP-activated, beta 1 non-catalytic subunit EMBV3_35509 TTCAAGCCCTAGTGAATAAAGCCAAAAGAGACCTGGGCATAATCCGTCGGCAGGTCCACA Gene GeneID:614011|LYRM4:NM_001076306:247_cdna Constitutive 1 NULL GeneID:614011 23 GENE LYRM4 MGC142651 LYR motif containing 4 EMBV3_41958 CACTGATGGAGAGCTGCGTTGCCTGTGCCTTTCTCCCTCCAGAGATGGCATTTTATTTCA Gene BVT0102_315879 + 1 EMBV3_17046 GK000020.2:24292920-24440629 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02387 TAGGTTAAGGTTCTCGGTGACAAGAGATTCACTACAAGTACAAAGGTATTTACCGTGGAG Gene GeneID:539850|HNRNPH3:XM_002698859:440_cdna UTR3_Alt 3 NULL GeneID:539850 28 GENE HNRNPH3 HNRPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) EMBV3_14132 TGCAGGACGACTGTCAGATGCAGTTCACAAAGTGTTGTTGCTAACGGTGTGGCAATGGGA Gene BVV0102_174900 + 0 NULL GK000023.2:9003580-9020181 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132200 TCONS_00132199 TCONS_00132201 TCONS_00132203 TCONS_00132202 1 XLOC_080727 Coding TCONS_00132203 XLOC_080727 Coding Coding ANKS1A 23:8838199-9007003 = TSS98959 6067 1 TCONS_00132203_4 1138 24 0.96420087320723 0.000178005931733676 2.07677478980757e-50 2.32235694271048e-05 9.41213438705908e-05 4.58018740287836e-06 5.0801477237717e-05 5.39340381676467e-26 0.000195002347052998 0.000139373032448315 8.82545721232871e-05 2.52114634917551e-08 0.000112274791180272 0.000134038719080328 0.000141873486398129 8.18326323337842e-05 0.00182784434780832 0.000421975278477888 0.00137779732580553 6.15339793930291e-05 2.04892034087125e-44 2.77694825551353e-37 0.00136810659548392 1.8583197737228e-08 0.000720290884076133 9.90758823509209e-06 4.21534128924282e-24 1.28356456204049e-05 0.000151927793922611 9.81877185669811e-09 0.000328957186345068 XM_005223301.1 ANKS1A PREDICTED: Bos taurus ankyrin repeat and sterile alpha motif domain containing 1A (ANKS1A), transcript variant X6, mRNA. 0.0 9575 99.94 0.87621559254986 NM_015245.2 ANKS1A Homo sapiens ankyrin repeat and sterile alpha motif domain containing 1A (ANKS1A), mRNA. 0.0 4675 86.89 0.639030822482281 TCONS_00132203_4 sp|Q92625|ANS1A_HUMAN ANS1A_HUMAN Ankyrin repeat and SAM domain-containing protein 1A; 0.0 1953 89.73 0.999121265377856 8 coding 0 0 0 0 -0.0456249522982984 0.680255741715605 -0.0504814717436208 0.293256352510252 GGGTGGTGTCCCCGGCCGGCTCCGGGGGTGCGTTGCCCGGAGACAGAAAGTTTGGGAGCCAGAACGGGTTCGGCGGCGGCCCAGGGAACGGGGTCCAGGGCGCGGCGGCCCTGGGGATGGGGAAGGAGCAGGAGCTGCTGGAGGCGGCCCGCACCGGACACCTCCCGGCCGTGGAGAAGCTGCTGTCCGGGAAGCGGCTCTCCTCAGGCTTCGGGGGCGGCGGCGGCGGCGGCGGCTCTGGAGGCGGTAGCGGCGGCGGCAGCGGCTCTGGAGGTGGCGGCGGCGGTCTTGGCTCCTCGAGCCATGCCCTGTCCAGTCTGCTCAGCATTTGGAGAGGGCCAAATGTGAACTGTGTTGACAGCACTGGGTACACACCTCTGCACCATGCTGCTTTGAATGGCCATAAGGATGTGGTCGAGGTTCTTCTGAGGAACGACGCGCTGACCAACGTGGCTGACTCTAAAGGCTGTTATCCGCTGCACTTGGCAGCCTGGAAAGGAGACGCCCAGATAGTGCGATTGCTCATCCATCAAGGGCCCTCACACACCAAAGTCAATGAACAGAACAATGACAACGAGACGGCCCTGCACTGCGCAGCGCAGTACGGCCACACCGAGGTGGTGAAGGTCCTCTTAGAGGAGCTGACTGACCCCACCATGCGCAACAACAAGTTCGAGACGCCTCTGGACCTGGCCGCACTCTACGGGAGGCTGGAGGTGGTGAAGATGCTCCTCAACGCCCACCCTAACCTCCTGAGCTGCAACACTAAGAAGCACACCCCTCTGCACCTGGCAGCGAGGAATGGCCACAAAGCCGTGGTGCAGGTCCTCCTGGACGCCGGCATGGATAGCAGCTACCAGACGGAGAAGGGCAGTGCTTTGCATGAGGCTGCTTTGTTTGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCAGGAATTGATGTCAACATAAAGGATAACCGAGGATTGACCGCACTGGACACCGTCCGGGAGCTGCCATCTCAGAAGAGCCAGCAGATAGCGGCACTCATCGAAGATCACATGACTGGAAAAAGAAGTGCAAAAGAGGTAGACAAAACCCTTACACCCCAGCCACCTCTCATCTCCAACCTGGACTCTATATCCCAGAAGTCTCAGGGTGACCTGGAGAAAGCAGTGACTGAACTGATCATCGATTTTAACACCAGCACAGAAGAGGAGGGTCCCTATGAGGCGCTGTACAATGCTGTCTCCTGCCAGTCCCTGGACAGCACGGCCAGTGGACGCTCGTCCGACCGGGACTCTGTGAGCAGGGAGGCTGAGGCGGCCGGAGGGAAAGCTGCTGGAGTGAGGCCTAGGGAACGTCCTCCGCCTCCAGCAAAACCACCACCTGACGAAGAGGAGGAAGACCACATAGATAAGAAGTATTTTCCCTTGACAGCTTCTGAGGTCTTGGCCATGAGACCCTGGGTTCAGGGGAGCCCAGCCAAGGAGGAGGATGAGCACCCTTATGAGCTGCTGCTGACAGCAGAGACGAAGAAGCTGGTGTCTGTGGATGGAAAGACAAAAGACCACAGGCAGAGCAGCGGTGGCCGGAGCCAGGACTCTGCGGAGGGGCAGGACGGGCAGGTCCCGGAGCAGTTCTCAGGTCTCCTCCACGGCTCCTCCCCGGTGTGTGAGGCGGGGCAGGACCCTCTCCAGCTGCTCCCTGCCCCTGGCCAGAACCATCGAGAAGGGTCCCCCGCGCAGGGCGCCTGCCCCGAGGAGATGCAGCTGGAGCAGACAGGCAGGCGTGCGTCCGGAGCCTCCCCGCCCCGTGTGCTGGACCAGAGTAGGAGAGTGGGCCACCCGGCAAGCCTGCCCCCCGCCCACAGCCAGACGCACCCCAAAACTTCAATGCGCACAGCCTTTCCACGCCCTGGGGGCGCCGAGGAGGAAGGTGACCCGAGCGGGGCCAGGAGCCGAGCCCCTCCCACCAGCAGACCCAAGGCTGAGCTCAAACTCAGCCGCAGCTTGTCCAAGTCTGACTCTGATCTCCTGACCTGCTCCCCAACGGAGGACGCCACGATGGGGAGCCGGAGTGAGTCCCTCTCCAACTGCAGCATTGGGAAGAAGAGGCTGGAGAAGTCGCCCTCCTTCGCCTCTGAGTGGGATGAGATTGAGAAGATCATGAGCTCTATTGGAGAAGGGATCGACTTTTCTCAGGAACAGCAGAGGATCTCAGGTGCGCGGCCGCTGGAACAGAGCGTCGGGGAGTGGCTGGAGGCCGTGGGGCTGCAGCAGTATGAGAGCAGGCTGCTTCTCAACGGCTTTGACGATGTCCGCTTCCTGGGGCCTAACGTGATGGAAGATCAGGACCTGCGGGAAATCGGCATCAGTGATGCACAGCACAGGCGGAAGCTGCTCCAGGCCGCACGGTCCCTGCCCAAGGTGAAGGCGCTGGGCTACGACGGCAACAGCCCCCTGTCAGTGCCCTCCTGGCTGGACTCGCTGGGGCTTCAGGACTATGTCCATTCCTTCCTGTCGAGTGGCTACAGCTCCATTGACACCGTGAAGAACCTCTGGGAGCTGGAGCTCGTCAACGTCCTGAAGGTGCACCTGCTCGGCCATCGCAAGCGCATCATCGCCTCCCTGGCGGACAGGCCCTACGAGGAGCCGCCCCAGAAGCCCCCGCGGTTCTCCCAGCTGAGATGCCAGGACCTGTTCTCGCAGACGTCGTCCCCGCTGAGCCAGAACGACTCCTGTGCCGGGCGGTCAGCTGACCTGCTGCTGCCTCCTGGGGACGCGGGCAGGAGGCCGCACGACAGCCTGCACGAGCCTGCGGCGCCCTCTCGGGCAGAGCGCTTCAGAACCCAGGAGGAGCACCGAGAGGCCAAGCTGACCCTCCGGCCCCCCAGCCTGGCTGCCCCCTACGCCCCTGTGCAGAGCTGGCAACACCAGCCGGAGAAACTCATCTTCGAGTCCTGCGGTTACGAAGCCAACTATCTGGGCTCCATGTTGATCAAAGATCTGCGAGGGACAGAATCCACACAAGACGCCTGTGCCAAGATGCGGAAATCCACAGAGCACATGAGGAAGATCCCCACCATCATCCTGTCCATCACATACAAAGGGGTCAAGTTCATCGATGCCTCCAACAAGAATGTCATCGCAGAGCACGAGATCCGGAACATTTCCTGCGCGGCCCAGGACCCAGAGGACCTGTGCGCCTTTGCCTACGTCACCAAGGACCTGCAGACTGGCCACCATTACTGCCACGTCTTCAGCACGGTGGATGTGAACCTGACCTATGAGATCATCCTGACGCTGGGCCAGGCGTTCGAGGTGGCCTACCAGCTGGCCCTGCAGGCCCAGAAGTCCAGGCCGGTGGGGGCCTCTGCCGCTGAGGTGATCGAGACCAGATCTTCCAAGCCCGTGCCGAAGCCCCGGGTGGGCGTGCGGAAGTCAGCGCTGGAACCACCTGACACGGACCCCGACGCCCAGTCCCACGCCAGCGTCTCCTGGGTCGTGGACCCCAAGCCAGACTCTAAGCGGAGCCTCAGCACCAACTGAGCCACCGAGGAACCGACTGTGCTGCAGAAACAGCCGTGCGGAGCGCAGGCTCCCGCCACCGCCGCTGCCACCGCCGCCTCACCTGCATTGGAGACCCAGGCCCACCTCTGCCCGCAGGACTCCTCCCGGCTGTGGGCCCGGGCCCGCCGCCAGGCCTCGTGGAGGGAGCCCTGCCCCGGTGCCGAGCAGCCCTCCAGCCTCTAGCAGATGAGACTAGGGACTCCAGAGACCCTAGAAGTGACTTGTCCAGAAAACGTTTTTTAATAGAAAAGAATTTTTTTTTATAAAATTAACACTTGGCTCAAACCTCTAGGTTAAACTGCCAATCTTTAGACCAGTGGCCATACGGTCCGAGGGTCTGTCCTCAGGCCAGGGCATGGACGCGCTTGTGCAGCTCCGAGAGGAGGCGCTGGGTGAACCGAGTGGCCGGACAGGCGCCCCCTTCAGCCGCTGCTCCTTTCTGAGCCGCACACGGTTTCTCGTCCCTGCCCGGAGCCGAGCGCGGCTGTGGCGGCTTCCACTCCGACCCCAGCGGGCAGAGCGTAGAGGTCGAGCCAGGCAGAGAACGAGCAGGTCCCGGGCCGCCGTGGTCCGAACACCGCCCTGGGCTGCAGGCCACGGGCCCTCCGGTGACCTCAGGCCGGCTGAGTCGGATCAGAAAGGAGAGGAAGCAGCTGTGTTTGTCTTGGGCATTAACGGGTAGGTCAGCTGAGGCGGCTGCCTGCAGGTGTGTGATTTATCTAATCAGGTGTGTATGATTAGGACTCACTTTGGTCTGACTGTTGTCCTTTCAGCTCTGGGCTCACCCCAGGCTCTGAGGGCGGAGAAGGCTGGGCGCAGAGGCCGTTTGCTCCCCCAGCGTGGCCTCCAGGGCCTGCAGTGCCGCCGCCCGATCCATCCTGCTGGCTGGCTTTGCTTTGCGCCTTTGGTTGCGTCGCTCCTCCTGGAGGCAGTAGAATGGGAGGATCTTGATCACTGGGGCTGGACCAGGTCAGCTGTGTGTCTAGCAGCTCGCAGAGCAGAGCCTTTCCTCCCCAAGCAGGCCCTTTGCTGGCGCGGTGCAGTTGGTCCTGGGGTCAGTAGGTCCAAGGCCTTGGCAGCACCCCACCCCCCGGCCAGGAGCTCCGGGGGCGGGCCCCCTGCACCGTCCACACCAGGGGTGTGGGGTCGCAGGCCCAGGGGGTCGCCCTTACTCTGGGATGGAGACAGGTGGTCCTGCCCTTTCGGTACTAAACAAGGACTTCAACACCGGAAGTCTGACTTCACGTCCCGCCGCTCCCAGGGCCTGACGGTTCTACTGTGCAGTATTCAGCCCATCCTTCTTCCAGGGATGGACAAGGAGCCCAAGCTAGGTGGGGAGACTGCTGGTCCGGCCACAGCACACGTGCTGTGCCCTCTTCCTCCTGAGGAAGGCCGGTCTCCTCTAAGTAGGCCCCTCGTGGTGGGTGGTGGATCCATAAAGAAAACTGTAGACACTACGATGAGTTCTTCAAGCTGTTTTTTGTTTTTATGTCCTAGGTAGGTGTCTCCTCCTCTTGAAGCTGCTATATCTTATTTATTCAGGGTGTTTTCATATTGGAAAGCCTTGGCTAATCTGCTCTGGATTTTGAGATTGGTTTATTTCTCAGTAGTCAAAAAGGGAGGGGCTAGATCTTTTTTTACTCCTCCTCTGGGACAGGTACTCTCCCTTCCCTAGAAAGAAATATTATAACATTGAGGACAGGCTTCACATGGAGAAGCCTCGCTTCTGCACACGAGCGCAGCCCCGTTCTGAAGTGTGCAGGCCCTTCAGGCAGGACTCGAGATGGAGGCGCTCTCTGGTCCACCCTCTTCCTCGCAGCTGCTCCGAGTGAGCGGGGCTTCCTTCCAGACAGGCTCTGCCTCTGCGATGCTCACACCCCTCCAGGGCCTCCAGTGCTCTGGGGAGTCCCTTGAGAAGCCCGGGGCTGAGCAGGCCGGTCTGCCCTCAGCCTGTGTAGGGGGGCCCAGGCCTGCAGGACGACTGTCAGACGCAGTTCACAAAGTGTTGTTGCTAACGGTGTGGCAATGGGACTGAATTGTAATAAAATGTTATTTAATCTTTGTCTGTATTTTGATACTTGAATGACTTCCCCTTCTATTTTACTGTACATATAATTGTTAATCTGTCCGATTTTGTCTAAATTACGAACATCTTGTGGTACCAAGCGTAACCGACCTGTGCGACAGCATAGACTGACCTCACTACATGAGAGAGTGTAAATATTCCTGGGCTTTTGGCTTTGGTTTTGTTATTTTCGTAACTGTACAACTTAGAACAGACTGAATTAATAAATGAGAAGTGACATGAAACCAGCCTTACGTTGTGGAGTCTGAGTTGGAACATTTCCTGACGGTTTTCCAGCAGAAGCGCGGGCACAGGCCAGCTGCTGGCTCTGGGTGCTAATGAGGATCCACTCTGCTTGGCTGGCACCAGTCTGGGGAACTGGCTCCACCCGGCACTCTCCAACAGGAAGGGCTGCTGGTCAGCGTTGACCCTGCTCTGGTGTGAGGGC EMBV3_43597 CTGGAGTGGGGTGCCATTGCCTTCTCCAGAAATCATACTAGGTGTTAAGAATTGCTTCTG Gene GeneID:282488|FAS:NM_174662:16_cdna Constitutive 0 NULL GeneID:282488 26 GENE FAS APO1 TNFRSF6 Fas (TNF receptor superfamily, member 6) EMBV3_04039 GAAAAAGTCGCCGTGATCTGTCAGCCACATGTCCTTAGAGGGTCAGGGTCGCGCTTGCCT Gene GeneID:510646|LMF2:NM_001037455:28_cdna Constitutive 0 NULL GeneID:510646 5 GENE LMF2 BC002942 MGC128522 lipase maturation factor 2 EMBV3_17106 GTTGTTTCTTGGACTGCAGAAATTGGAAGATTAAAGAGAAGTTGACTGCGGATCCAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00820 GTGTTTGTGGTGGGGGTTGGGATGACCAAGATTCAAGATAAGGCTAATCCAATTGATAAA Variant GeneID:508918|SCP2:NM_001033990:31_cdna 141^464 4 EMBV3_31831 GeneID:508918 3 GENE SCP2 MGC127405 SCPX sterol carrier protein 2 EMBV3_18737 CTAGTTACCTATAAATGGCAGACCTTTTAGGAGAATAAGAGAAAGGTAAGGGCTCTCTTG Gene GeneID:535351|VEZT:XM_002687206:66_cdna Constitutive 1 NULL GeneID:535351 5 GENE VEZT NULL vezatin, adherens junctions transmembrane protein EMBV3_17939 AAGAAGAGAAAAGTCAGGCGACTGCGCCAAGCTAAGGAGGAAGCGATGGCGGAAACTGAT Gene GeneID:613925|ATP6V1G3:XM_002694234:175_cdna Constitutive 1 NULL GeneID:613925 16 GENE ATP6V1G3 NULL ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3 EMBV3_06801 CGTGGAGAGCCAGAGACAGGAGGAAAGAGGTGTGAGGGTGGCTTGAACACAATACAACTA Gene GeneID:541005|DET1:NM_001099117:56_cdna Constitutive 0 NULL GeneID:541005 21 GENE DET1 MGC148385 de-etiolated homolog 1 (Arabidopsis) EMBV3_09470 GCTTTGTATCTTTCAAGTTTTTCAGTTGAAAATGTCTTGAACTAGCTTTTGCTTTTGATG Gene BVT0102_312576 + 0 NULL GK000004.2:56910995-57080014 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181670 TCONS_00181669 TCONS_00181651 1 XLOC_110665 Coding TCONS_00181651 XLOC_110665 Coding Coding DOCK4 4:56128978-56912743 = TSS135908 8357 1 TCONS_00181651_8 1964 52 0.989403698051965 0.00119327641746602 0.000808892766146666 0.000914401426041569 0.000528232251376546 0.000736434845057805 0.000332892383157861 0.000511643963927406 0.000631142791159776 0.000674511954209448 1.15974556068344e-05 1.28798212557992e-05 6.04614199952435e-05 4.67092513041672e-05 9.82963653870621e-05 0.000215733733893715 0.000928287155846219 4.64100609409772e-05 0.000594467421413748 0.0014549418451163 0.00154019684987498 0.000495959289172173 6.24673039462495e-05 0.00092322383699809 0.000280948203103489 0.00169055462389088 0.00177246874254634 0.00098540961502743 0.000108204956792179 6.84442980926456e-05 0.000348302984506166 XM_002686809.3 DOCK4 PREDICTED: Bos taurus dedicator of cytokinesis 4 (DOCK4), 0.0 1.507e+04 100.00 0.999880339834869 NM_014705.3 DOCK4 Homo sapiens dedicator of cytokinesis 4 (DOCK4), mRNA. 0.0 1.146e+04 90.32 0.999880339834869 TCONS_00181651_8 sp|Q8N1I0|DOCK4_HUMAN DOCK4_HUMAN Dedicator of cytokinesis protein 4; 0.0 3848 98.22 0.99949083503055 2 coding 0 0 0 0 -0.0219969225270748 0.880943070338285 0.0128913410768712 0.825632083578879 AGTTCAGTGAATCAGAACAATGACTGCGCCTCCGGGTTCCCGGGAGCGCGTCGGAGGACTCTGAGCAGCCACCGCCGGGAGAGCGGCGGGCGGCGCAGCCTCGGCCGCGCAGTGTCAACGCTGGGCTCGGGAGCCTCCAGCGCAGACCCTGCCCAGCGACCGCAGCCCGCGCGGAGCCGCGGGGCTCCAGCGCTGCAGCCACTACTCGGGAGCTGTGCATTGTTGTGAGCCGGAGAAGGGGCGCGGGGATTACAAAGCCTGAAGACCCCGGACCCCTGTTTAGCCATGTGGATACCTACGGAGCACGAGAAATACGGCGTGGTTATTGCCAGTTTTCGAGGAACTGTGCCATATGGTCTGTCGTTGGAAATTGGAGATACAGTTCAGATCCTGGAGAAGTGTGATGGCTGGTACAGAGGATTTGCCTTAAAAAACCCAAATATCAAGGGTATATTTCCTTCCAGCTACGTTCACTTGAAAAATGCCTGTGTAAAGAACAAAGGACAATTTGAAATGGTTATTCCCACTGAAGACTCTGTGATCACAGAAATGACATCAACATTAAGAGACTGGGGAACTATGTGGAAACAACTCTATGTGAGAAATGAAGGTGATCTCTTCCACCGCCTGTGGCATATCATGAATGAAATCCTGGATCTGCGGCGGCAGGTGTTGGTGGGGCACCTCACCCATGACCGGATGAAGGACGTGAAGCGCCACATCACCGCCCGCCTGGACTGGGGCAACGAACAACTGGGACTGGACCTGGTGCCTAGGAAAGAGTATGCGATGGTGGATCCAGAGGACATCAGCATTACTGAGCTCTACCGATTGATGGAGCATCGACATCGGAAGAAAGATACCCCGGTGCAGGCCAGCAGTCACCACCTCTTTGTGCAGATGAAGAGTCTCATGTGTTCCAACCTGGGAGAGGAGCTTGAGGTCATCTTTTCACTGTTTGACAGTAAAGAGAATCGGCCGATCAGCGAGAGATTTTTCTTGAGGCTAAATAGAAACGGGCTTCCCAAAGCCCCAGATAAACCAGAACGACACTGCTCTCTCTTCGTGGATTTGGGGAGCAGCGAGCTCAGAAAGGACATCTACATCACTGTGCACATCATCCGAATCGGTCGAATGGGGGCAGGAGAAAAAAAGAATGCCTGCAGTGTCCAGTACCGGCGACCCTTTGGCTGTGCAGTTCTTAGCATTGCTGACCTGCTGACTGGAGAGACGAAAGATGACCTCATCCTGAAAGTGTACATGTGTAATACAGAGAGTGAGTGGTACCAAATCCACGAGAATATCATCAAGAAGTTGAATGCACGTTATAATTTGACTGGCTCCAATGCAGGTTTAGCTGTTTCTTTACAACTCTTACATGGAGACATTGAACAAATCAGAAGGGAATACTCATCAGTATTTTCTCATGGAGTATCCATCACCAGGAAGTTGGGTTTTTCTAATATTATTATGCCTGGTGAAATGCGGAATGATTTATATATCACTATAGAAAGGGGAGAATTTGAGAAAGGAGGAAAGAGTGTGGCCAGAAACGTGGAAGTTACGATGTTCATTGTAGAGAGTAGTGGCCAGACCCTGAAGGATTTTATATCCTTCGGCTCTGGAGAGCCACCGGCTAGCGAGTACCACTCCTTTGTGCTTTATCATAACAACAGCCCCAGGTGGTCCGAGCTGCTGAAACTTCCTATCCCTGTGGATAAATTCAGGGGTGCACACATCCGCTTCGAGTTTCGGCATTGTTCCACAAAGGAGAAAGGAGAGAAGAAATTGTTTGGCTTCTCCTTTGTTCCCCTGATGCAGGAAGATGGTAGGACACTTCCAGATGGCACGCATGAGCTCATTGTGCATAAGTGTGAAGAAAACACAAATCTTCAGGATACTACCCGCTACCTCAAACTTCCTTTTTCCAAGGGCATTCTCCTTGGGAATAATAATCAAGCCATGAAGGCCACAAAGGAGTCTTTTTGGATAACATCTTTTCTCTGTTCCACAAAACTCACACAAAACGGTGATATGCTTGATCTTTTGAAATGGAGAACCCACCCAGACAAGATCACAGGCTGTCTCTCTAAATTAAAAGAAATTGATGGCTCCGAGATAGTAAAGTTTCTGCAAGATACACTGGATACCTTATTTGGAATTTTAGATGAAAATTCCCAAAAATATGGGTCTAAAGTGTTTGATTCATTGGTTCACATAATCAATTTGCTGCAAGATAGCAAATTTCATCATTTTAAACCTGTAATGGACACTTACATTGAGAGTCATTTTGCTGGGGCACTTGCATACAGAGATCTCATCAAAGTACTCAAGTGGTATGTGGACCGGATCACAGAAGCGGAGAGACAAGAGCACATCCAGGAGGTGTTGAAGGCCCAAGAATATATTTTTAAGTATATTGTTCAGTCTCGAAGGCTGTTTTCCCTTGCCACCGGAGGACAGAATGAGGAGGAATTTCGCTGCTGTATTCAGGAACTGCTCATGTCAGTTCGTTTTTTTCTTTCACAAGAAAGCAAAGGATCTGGAGCATTATCTCAATCACAGGCTGTGTTTCTGAGCTCCTTCCCAGCTGTGTATTCGGAGCTGTTGAAGCTCTTTGACGTCCGGGAGGTGGCCAACTTGGTCCAGGACACCCTGGGCAGTCTGCCGACCATCGTGCATGTGGATGATGCCCTGCAGGCCGTTAAACTGCAGTGCATTGGCAAGACTGTGGAAAGCCAGCTCTATACCAACCCAGATTCCCGGTACATTCTCTTACCTGTCGTGTTACATCACCTCCACATGCACTTGCAAGAGCAGAAGGACCTGATCATGTGTGCACGGATCCTTAGCAACGTATTTTGTCTCATCAAGAAAAATAGCTCAGAAAAATCTGTGCTGGAGGAAATAGATGTGATAGTGGCCAGCCTGCTGGACATCCTGCTGAGAACCATCTTGGAGATCACCAGTCGTCCGCAGCCATCTGGCTCCACCATGAGGCTTCAGTTCCAGGATGTCACGGGGGAGTTTGTTGCTTGTCTCCTGTCCCTATTACGGCAAATGACAGATAGACATTATCAGCAGCTTCTTGATAGTTTCAACACAAAAGAAGAACTAAGGGATTTCCTGCTGCAGATATTTACTGTGTTCCGAATATTGATACGCCCAGAGATGTTTCCAAAGGACTGGACTGTCATGCGCTTGGTGGCTAACAACGTCATTATTACAACAGTTCTGTACCTGTCAGATGCACTTCGGAAGAACTTCTTAAATGAAAACTTTGATTATAAGATCTGGGATTCCTACTTTTACCTTGCGGTCATTTTTATAAACCAGTTGTGTCTGCAGTTAGAGATGTTTACACCTTCCAAAAAGAAAAAGGTATTAGAAAAATATGGTGACATGCGGGTAACAATGGGTTGTGAAATTTTCAGCATGTGGCAAAACCTAGGAGAGCACAAGCTTCATTTCATTCCTGCCCTGATTGGCCCCTTCCTGGAAGTAACCTTGATACCCCAGCCAGATCTCCGCAATGTCATGATTCCTATTTTCCACGATATGATGGACTGGGAGCAGAGGCGGAGCGGCAATTTTAAACAGGTGGAAGCCAAGCTCATTGACAAACTGGACAGCCTGATGTCCGAAGGCAAAGGCGATGAAACCTACCGTGAGCTCTTCAACAGTATTCTACTAAAGAAAATTGAGCGGGAAACATGGAGAGAAAGTGGCGTTTCCTTAATCGCCACTGTAACTCGGCTGATGGAGAGGTTGTTAGATTACAGGGACTGCATGAAAATGGGCGAGGTAGATGGCAAAAAGATTGGGTGCACCGTGAGCCTCCTGAACTTCTATAAGACTGAACTGAACAAGGAAGAGATGTATATACGCTACATCCACAAACTCTATGATCTGCACGTCAAAGCACAGAATTTCACAGAGGCTGCCTATACGCTGTTGTTATATGATGAGCTGCTAGAATGGTCTGACCGGCCCCTCCGGGAGTTCCTGACCTACCCCATGCAAACGGAATGGCAGCGCAAGGAGCACCTGCACCTCGCCATCATCCAGAACTTTGACAGAGGCAAGTGTTGGGAGAATGGCATCATCTTGTGCCGGAAGATTGCAGAGCAGTACGAGAGTTACTATGATTACAGAAACCTGAGCAAGATGAGGATGATGGAGGCCTCTTTGTATGACAAAATTATGGACCAGCAACGTCTTGAACCAGAGTTCTTCCGAGTTGGATTTTATGGGAAAAAGTTTCCATTTTTCTTAAGAAATAAAGAGTTTGTGTGTCGAGGGCATGACTACGAAAGACTGGAGGCCTTCCAGCAGAGAATGCTGAACGAGTTCCCCCACGCCATCGCCATGCAGCATGCCAACCAACCCGACGAGACCATCTTCCAGGCAGAAGCTCAGTATTTGCAGATATACGCCGTGACTCCCATCCCAGAAAGCCAGGAGGTCCTTCAGAGAGAAGGTGTTCCAGACAACATCAAAAGTTTTTATAAAGTGAATCACATCTGGAAATTCCGCTACGACAGACCGTTTCACAAAGGCACAAAAGATAAAGAGAATGAATTCAAGAGTCTCTGGGTGGAAAGAACATCACTATACTTGGTGCAGAGTTTACCTGGAATCTCCCGCTGGTTTGAAGTGGAGAAGCGTGAAGTGGTAGAAATGAGTCCTCTGGAAAATGCCATTGAAGTGCTGGAGAATAAGAATCAGCAGCTGAAGACTCTGATTAGTCAGTGTCAGACAAGACAGATGCAGAATATTAATCCCCTAACCATGTGCCTGAATGGAGTTATAGATGCTGCGGTTAATGGTGGAGTTTCCAGGTATCAAGAGGCATTCTTTGTCAAAGAATATATCTTAAGTCACCCTGAAGATGGAGAGAAAATTGCACGGTTAAGAGAGCTGATGCTTGAGCAGGCACAGATTTTGGAATTTGGCTTGGCTGTGCACGAGAAGTTTGTGCCTCAGGATATGAGACCCCTTCACAAGAAGCTGGTCGACCAGTTCTTTGTGATGAAGTCCAGCTTGGGGATCCAGGAATTCTCTGCTTGTATACAAGCCAGTCCAGTCCATTTTCCTAATGGAAGCCCTCGTGTGTGTAGAAACTCAGCACCTGCTTCCATGAGCCCAGATGGTACCAGGGTAATTCCTCGACGCAGCCCATTAAGCTACCCAGCTGTCAACCGATACTCTTCCTCCTCACTGTCCTCACAAGCGTCTGCTGAAGTAAGCAATATTACAGGGCAATCAGAAAGCTCTGATGAAGTCTTTAACATGCAGCCAAGTCCATCTACCTCAAGCTTGAGTTCTACTCACTCCGCCTCACCTAATGTGACAAGTTCTGCTCCCTCGAGTGCCAGAGCTTCTCCTTTGTTGTCCGACAAACACAAACATTCCAGAGAAAACTCTTGCCTGTCCCCAAGAGAGCGGCCATGCAGTGCCATCTATCCGACACCTGTGGAACCTTCTCAGAGGCTCCTGTTTAATCACATTGGAGATGGAGCCTTGCCACGCAGTGACCCCAATCTTTCTGCTCCTGAGAAAGCTGTGAACCCCACCCCTAGCAGCTGGAGCCTGGACAGTGGGAAGGAAGCCAAGAACATGGCAGATGGTGGGAAGCTTATCTCTCCCCCCGTCCCTCCACGACCCACACAGACTGCTTCACCAGCAAGACACACGGCGTCAGTATCCCCCTCGCCTGCTGGGCGATCTCCACTGAAGGGCTCCGTGCAGTCCTTCACCCCCTCTCCCGTGGAGTACCACTCCCCAGGACTCATCTCCAACTCCCCCGTGCTGTCGGGCAGCTACAGCAGTGGGATTTCGTCCCTCAGCCGGTGTAGCACGTCAGAGACCTCAGGCTTCGAAAATCAGGTGAATGAACCGTCTGCGGCGCCGCTGGGGTCGGGGCCGGGCTACGGCGGCGGGTCGGAGGAGCCGGTGCGCAAGGAGAGCAAGACGCCGCCGCCGTACAGCGTGTACGAGCGGACTCTGCGGCGCCCCGTGCCGTTACCTCACAGCCTCTCCATCCCCGTCACCGCCGAGCCGCCCGCCTTGCCCCCCAAGCCCCTGGCGGCGCGGTCGGGCCACCTGGAGAACGGGACCAGGAGGACGGACCCCGGCCCGCGGCCCAGGCCCCTGCCCCGGAAAGTCTCCCAGTTATAAGTCCCTTTTCTATTTCCCTGCCACGCATTCTTTGCCGTTTACAAGACATTAAGAGGTATGGTGAAAAGACATCTTTAGTGTAGGCACTTTAATAACTTAACTCAGATTTGTCTTTAGATGAATGGAATTTAAACTCGCTTAATAGAATGTTGCACAATATTAAAAGTTACTGATCCCCAACGCCAGATGTCCCAAGTATGGCTGAATTTCATTACACCGTTTCTCGTTTGAAAGTGATAAATAGTGATAAAGCCTTCTTTTGTATCTTTTTATGTTCACTTTTTTTTTTACATAGTTTAATCTCAACTAGTAAAATATTGTCGAACAATACGAAGCGTGATAATGTTGTATACTTTTTACTGAATACTTGATACTTCATGAAAGCTTATTAAGTCAGTGCACATCCTGAGGCAGTGGTCCTTACTTTAGAAGACTTCTGTAAATAAGGTGAGATTTCTGACTCTTTCTATCAACAGACAAATGAATGCACATCACCATAATTAAAAGTTAAAGCAGGCTAGTGAGATACACACTAAAGGAGTTGCAAGGATTGGGACTGGAAGCGGTTTTGTTCTTGAAACATACGTCTTTAAGGTTGCTTTTGACCTTGACTGCTGTCTACATTCTTTAGAAGCTACTCTACCAGTTGGTTGGTAAACCACCGTTTAGTACCCTGACACCATGATATCTACTGTATTTCTTTTCAAGGTGCAATTTACTTCCAGAGTTCCAATCAGGTTGATGAAGCAAAAGACCCCAGGAGAAATGTTTACTTGAATCTTGTGCTTCCTTAGATAATTTCCACTACCCAATTTGTCATTGAAGAAGAAATGTTCGTGTATTAAGTAGGCACAAATTAATGTGTCCCATTAACAAGAATTCAGGAATCAATACAGGACAGTATTAAATCGATAGAGTAAATGAAGAAAAAAAGTAGAGAAAATATATTAGCATGATTAAATGGCAAAAGGACTTTGAAAAGGCAAGGGCATTAACTTTCAGTCCTGCACAAAATAAGAAATTCCTCACAACTCCATTGTTACCAGTGGGGCTTGTCTTCTGAACTAATCCTGTTATCCTTTTGTTGAAGGAGGATGGCTGTAGACTGCTCTAGCTTGAACATTATGACATAGCATCTTAGATCTAGATAGGGATGCTAATGCCACAGTCATAGGAGTGTGAAAAGAGAAAAGCACCTTGTATGTAGTAATGTATTTTGTATCTTGTTTTCTTTACTGACTGTTTATAACACTCAACTGACAATAGATATGAACTGTATTTTAAATCATACTGTTGAATATTTTCCCTCTTTTGTTGGGAAGCTCATTTTAGTTTAACTGTGTTTGTTTTTGTTGATAGCTTACCCAGAAGGCAGTGACCACTTTTTTATATTCCCTTCGAAACCATTCAGCAGGTATATGCTGTTGAGACTGGTTATAGAGGTTTTCTATAATAAATGTTCAAGTATTTTTGTACATAACTGGTTAATTTTAATAAGAGATACCATTACATGTAAAAATTAAAAATAAAAGCAAACTGTTGTGGATGCAGTATGATTGTTATAATTATGCCAAATACTTTATGTATGGAAAAAGAATATTTGTACATATGTGCTTTTAACAATAATTCTGCCATATTGACTACAGTTTTGAATGTCAGAAAAATTAATATATGTTAAAATATTTATGTTTAGTGACAGTATTCTTAATAGAGAAAAGGAACATGAATTTTAGCTTTGTATCTTTCAAGTTTTTCAGTTGAAAATGTCTTGAACTAGCTTTTGCTTTTGATGATAACACTTTGTGTTTGTAATCACATCCTTAAGTATATATATATATCTATATATATAGGAAGATACATATTTCTGTTGCTTTAAAGAAGTAAAGCCTTCCTTCCATTTAAATAAGGTGACATGCTTAAGATAACAAAGCTCTGATTTCCTTTTCATCTGTAATTTAATAGATTTCTTGACTAGTGCTTGGGCACAGTGTAAATCAGTGTTATTGCTCTTGAATCCATTTTACAAAAAAAAAAATTGGGGCAATGAGCAGTCGATCATGTGCGTGTATTCTGAAGCAGCTATAGAGCAGAACATTTCAAGAGATTCTGTTAGCCCAGATGTTCATGTTGGTTGCTGCTGAACGGTAAATATTAAATAAAAGTACGTGATTAATCTT EMBV3_13475 GAGGGCATCTGAGGCATTTAACTATTACTGGCTAGTTGGAAGAAGAAAGGTTGGTGTGCC Gene GeneID:507047|TAF11:NM_001034276:89_cdna Constitutive 0 NULL GeneID:507047 23 GENE TAF11 MGC128549 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa EMBV3_11971 GGATAACACTGTCCTCAGGCAAGATACATCCTTGTGAAGACCAGGTCTACTCCCATGATT Gene BVV0101_014277 - 1 EMBV3_18700 GK000023.2:40677007-40770311 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118457 TCONS_00018603 TCONS_00238581 TCONS_00253739 TCONS_00118490 TCONS_00059696 TCONS_00250599 TCONS_00012285 TCONS_00127445 TCONS_00125637 TCONS_00219592 TCONS_00118456 TCONS_00031886 TCONS_00246739 TCONS_00234240 TCONS_00087729 TCONS_00196823 TCONS_00174808 TCONS_00118491 TCONS_00232829 TCONS_00174807 TCONS_00251720 TCONS_00173459 TCONS_00198768 TCONS_00072261 TCONS_00055707 TCONS_00174805 TCONS_00023655 TCONS_00171428 TCONS_00204211 TCONS_00018600 TCONS_00207933 TCONS_00174806 TCONS_00118487 TCONS_00232824 TCONS_00160961 TCONS_00089291 TCONS_00199364 TCONS_00099018 TCONS_00209974 TCONS_00000529 TCONS_00246741 TCONS_00246740 TCONS_00220566 TCONS_00118459 TCONS_00232830 TCONS_00118040 TCONS_00056144 TCONS_00204210 TCONS_00118441 TCONS_00010963 TCONS_00074644 TCONS_00220168 TCONS_00174809 TCONS_00162767 TCONS_00125353 TCONS_00018601 TCONS_00252008 TCONS_00080713 TCONS_00092544 TCONS_00107436 TCONS_00118488 TCONS_00137813 TCONS_00201129 TCONS_00018602 TCONS_00092546 TCONS_00004603 TCONS_00037923 TCONS_00108562 TCONS_00056149 TCONS_00221350 TCONS_00125692 TCONS_00137814 TCONS_00027918 TCONS_00176866 TCONS_00118489 TCONS_00168038 TCONS_00092545 TCONS_00173458 TCONS_00006385 TCONS_00218901 TCONS_00206552 61 XLOC_072622 XLOC_009288 XLOC_145248 XLOC_156678 XLOC_072644 XLOC_036486 XLOC_153542 XLOC_007831 XLOC_077655 XLOC_077179 XLOC_132911 XLOC_018131 XLOC_151107 XLOC_143719 XLOC_052579 XLOC_118488 XLOC_104695 XLOC_142312 XLOC_154661 XLOC_104361 XLOC_120422 XLOC_044030 XLOC_033515 XLOC_014322 XLOC_103815 XLOC_124371 XLOC_126448 XLOC_142307 XLOC_097854 XLOC_054076 XLOC_121017 XLOC_059261 XLOC_128485 XLOC_000141 XLOC_133883 XLOC_072206 XLOC_033947 XLOC_072607 XLOC_006514 XLOC_046398 XLOC_133485 XLOC_099648 XLOC_076895 XLOC_154949 XLOC_049597 XLOC_056919 XLOC_063346 XLOC_084023 XLOC_122777 XLOC_001070 XLOC_021752 XLOC_064467 XLOC_033952 XLOC_134666 XLOC_077234 XLOC_015372 XLOC_106640 XLOC_102874 XLOC_001948 XLOC_132220 XLOC_125074 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_38778 ATGAACGTTGTTACCTGGACCTGGCTAGGCTGAGAGGTGTCCACTACATCACTTGGCGAA Gene GeneID:508782|C22H3ORF64:NM_001077882:20_cdna UTR3_Alt 2 NULL GeneID:508782 22 GENE C22H3ORF64 MGC143280 chromosome 3 open reading frame 64 ortholog EMBV3_29101 CGAGTGTTCTGTGAACCAGAATTCAATCAGATCTTGCCTAAATCATCCAGACAGAAAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42863 CAGTCAGAGTTCAAGCCTTCCTAGTCATCGCAGAATTCATACCGGAGAGAAACCCTACAA Gene GeneID:539675|LOC539675:XM_002695277:44_cdna Constitutive 0 NULL GeneID:539675 18 GENE LOC539675 NULL similar to zinc finger protein 415 EMBV3_24064 CTTCAAGGTTCCGTATTTTGTGCTCACAGTAGCAAATGGCCCAGAAGACGTCAATCGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05153 AACGCCTGGAAGAAAAGCCCTACAACGTGTTTGATAACTGTACACGGCGCAGCAGCCAGT Gene BVT0102_128948 - 1 EMBV3_11332 GK000022.2:59691107-59694216 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32578 GTGACAGAGAGCTTGTGAAAGTTGGTATTTCTGGCCTACGCTGCCATCATTCTACCACCC Gene BVT0101_022018 + 0 NULL GK000010.2:19022177-19037679 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016216 TCONS_00016213 TCONS_00016214 TCONS_00016217 TCONS_00016218 TCONS_00016212 TCONS_00016215 1 XLOC_008662 Coding TCONS_00016214 XLOC_008662 Coding Coding PARP6 10:18998848-19025554 j TSS11286 2648 1 TCONS_00016214_6 341 24 0.901741246957499 3.96895475228274e-05 4.47700420699765e-25 0.000126169216105662 0.000106958177568918 1.16270588023216e-05 2.52791278486129e-36 1.07380715450328e-17 2.26404950270035e-05 7.08135410418517e-13 0.000445500193745014 0.000195722545705432 0.00014176336656382 2.04625923274777e-08 1.55468645195754e-19 3.31658875070808e-16 0.00116308355428947 8.47642016655916e-05 6.23029604034479e-16 5.97950406959134e-52 0.000187665540432942 0.00100086330512372 2.5562587281682e-11 0.00035569452750542 4.50243441425856e-22 0.000206409802750113 1.22713246708234e-13 4.81978709402992e-05 4.6761022671135e-05 0.000111116073991795 0.000237900397171819 NM_001103241.1 PARP6 Bos taurus poly (ADP-ribose) polymerase family, member 6 (PARP6), 0.0 3730 95.37 0.826283987915408 XR_243114.1 PARP6 PREDICTED: Homo sapiens poly (ADP-ribose) polymerase family, member 6 (PARP6), transcript variant X6, misc_RNA. 0.0 3510 91.01 0.92333836858006 TCONS_00016214_6 sp|Q2NL67|PARP6_HUMAN PARP6_HUMAN Poly [ADP-ribose] polymerase 6; 0.0 548 92.47 0.794721407624633 0 coding 0 0 0 0 -0.116156630034532 0.522891908754923 -0.0158107311910416 0.76836786293189 GCTCGTCTCCTCGGCGGCGGCCGCGCGCGGCCCGGGGTCGCCCAGAAAGCAAGCAGCAACAACCCTTGGAGAGAGACTAAGTTTTCTTGACTTCTACAGTGACAGAGAGCTTGTGAAAGTTGGTATTTCTGGCCTACGCTGCCATCATTCTACCACCCAGCCGAAGACGCCCCAGGCTGGACATTAGTGCCTCCCTCTTTATTTCTCTGTGATCATCCAGATCAGCACCTGACTGTTTATTTTCAAATCTCACAAACCCAGCCCCCAGATCTTCATGTTCTGGTTCTCAGCTACTATTGAAGGACAGTGACTTGTTACCACCACAACAGCAGATCCTGCCTTCCTCAGCTGATCTCCAGTCAGCCCCTGATATCGCCACCCCCCTCCCAACCCTTGTCTCCTCTTTTGGCCTCCTAAATGCCCATCTCGTTGGCCTGGGTTCAACTGGTGGTATGGAGGGGTGCTGCCTAGCACTGACCTAGGAGTGTGTGTTACCCACTGACCCAATGGACATCAAAGGCCAGTTCTGGAATGATGATGATTCGGAGGGAGACAATGAATCAGAGGAATTTCTCTATGGAGTTCAGGGAAGCTGTGCAGCTGACCTATATCGGCACCCACAGCTGGATGCAGACATTGAAGCTGTGAAGGAAATCTACAGTGAGAACTCTGTATCCATCAGAGAATATGGAACTATCGATGACGTGGACATTGACCTCCACATCAACATCAGCTTCCTGGATGAGGAAGTTTCTACAGCCTGGAAGGTCCTCCGGACAGAACCTATTGTGTTGAGGCTGCGATTTTCTCTCTCCCAGTACCTTGATGGACCGGAACCATCAATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTTGGGCTGGGTCTTCAGTTGAAAAAAATCCTGGGTATGTTTACATCCCAACAATGGAAACATCTCAGCAACGATTTCTTAAAGACCCAGCAGGAGAAGAGGCACAGCTGGTTCAAGACAAGCGGTACCATCAAGAAGTTCCGAGCTGGCCTCAGTATCTTCTCACCCATCCCCAAGTCACCCTTATTCCCTATCCTAAGCTCATGAACCGTTCCATCTCCTGCACCATGAAGAACCCCAAAGTGGAGGTGTTTGGCTACCCTCCCAGCCCCCAGGTCAGTGGTCACTGCAAGAACATCCCCACTCTGGAATATGGATTCCTTGTCCAGATCATGAAATATGCAGAGCAGAGAATCCCAACATTGAATGAGTACTGTGTTGTATGTGATGAGCAGCATGTCTTCCAGAATGGGTCCATGCTCAAGCCAGCCGTCTGTACTCGTGAACTGTGCGTTTTCTCCTTCTACACGTTGGGAGTCATGTCCGGAGCTGCAGAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTTTGGAGTCCCCTAGAAAGAGCATCATCTTTGAGCCTTATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAACCCTAAGAAGAAGAATTATGAGCGACTGCAGAAAGCTCTGGATAGTGTGATGTCCATCCGGGAGATGACCCAGGGCTCGTATCTGGAAATCAAGAAGCAGATGGACAAGCTGGATCCCCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAGCAACAGGTCGCACATTGTCAAACTACCTCTCAGCAGGCAGCTGAAGTTCATGCACACCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAGGACAGCATAGGATGCCCTCCAAAGATGAGCTCGTCCAGAGATACAACAGAATGAATACCATCCCCCAGACCCGATCCATTCAGTCAAGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCCAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTGCACACGGTTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCCCTGTTCCCCCAGGATCCATCTGCCCTCATAAAAGGGCTCAGGAGCAGCAGACAAGTCTGCCCTGAGGAATCAAGGGGCCATTACTAAGGGGCAGGAAAAAGATAGACGAGGCGGCCTTCATGGTGGAGATTGACCCAGGAACCACTCCACATTTGGATGGCCCAGACTGACTCCTTACCCCGATTTTCCCAGTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAGGTGCTGTGGACTGGATATGATCACTGTGGTCTGACTAGCCTTGGCCCAGCACCTGCTGCCCCAAGCCCCCAAATGGGGGTAGGGGTGGGGAGAGTGGAACATCATGGGGGCTGGGACTGTTTATGTTGGATGGAGTCAAAGCTCAGTCCATCTAGTATAGTATCCTAAAG EMBV3_19215 ATCGAGTCCCAACCCAGGTGACTCAGAAACGCCTGCAGAGGAGAGCCCGGCTTCGTCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06375 TGGCTTCCCAAACTCCAGTGTCCACATCCACAACCGCGAATTCAGCATCCCTATCGAGAT Gene GeneID:530549|EFHB:XM_002684714:52_cdna Constitutive 0 NULL GeneID:530549 1 GENE EFHB NULL EF-hand domain family, member B EMBV3_36366 GAGCCACCGTATTTGCATCAGACTTGCACTTTTATCCTGGACTACTGGGTTTGTGCATTC Gene GeneID:100139489|LOC100139489:XM_002690688:298_cdna Constitutive 0 NULL GeneID:100139489 10 GENE LOC100139489 NULL similar to Olfactory receptor 4K3 (Olfactory receptor OR14-14) EMBV3_27799 AAGCAGAGGATGTGCTGAGAGCAAGAGAAGAACTATCTTGAGTGGCCTGATCATCCAGGG Gene BVT0102_286978 + 0 NULL GK000011.2:22046010-22066099 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024361 TCONS_00024359 TCONS_00024356 TCONS_00024355 TCONS_00024357 TCONS_00024360 TCONS_00024362 TCONS_00024358 1 XLOC_014490 NonCoding TCONS_00024357 XLOC_014490 NonCoding NonCoding THUMPD2 11:22046973-22067063 x TSS17901 501 1 TCONS_00024357_1 34 0.343313373253493 4 0.975260092587984 0.00216355680786988 0.000639544075492389 0.0034833654450285 0.000413071512850728 0.000101026871067602 1.27424902689282e-05 0.000316920519686676 0.000648764709985866 0.000534520870299329 0 0 0 1.59831330470015e-05 6.04603631160629e-05 2.89730184993962e-15 0 0 0 0.00187732883017786 0.00109975519327992 0.00179525864583886 0 0 0 0.00295861975496446 0.00422189521861285 0.00179233634588313 0 0 0 XM_005212599.1 THUMPD2 PREDICTED: Bos taurus THUMP domain containing 2 (THUMPD2), 2e-69 266 100.00 0.291417165668663 NM_025264.4 THUMPD2 Homo sapiens THUMP domain containing 2 (THUMPD2), transcript 1e-21 107 76.19 0.291417165668663 0 noncoding 1 0 1 1 -0.462479196501552 0.107932859356317 0.0446223631711954 0.550263472781804 CATTCTGGCCTAAGGGGCAGGGGGCAAGCATATTCCCTTGAGTAGGGTGTAGGTAAAGCAGGGATGGATCAAGCAGAGGATGTGCTGAGAGCAAGAGAAGAACTATCTTGAGTGGCCTGATCATCCAGGGGATCCTCCCGACCCAGGAATCAAGCCTGCATCTCTTGGATCTCCTGCAGTGGCTGGTGGATTCTTTACCACTAGCACCACCTAGGAAGTTCCTTCAGGCCCCACATGATTCCATAAATCCAGGATTAAAGTAATTCAATCCAGTTATTAAATAAAAGCTGCCGAATGGGAAGGACACCAATGGGGTGAGCTGAATGGACGAGCTGCAGAATAAGGAGTCAAGCGCTCTTCGCCTCCAGGTTCCTCTGTGTGGCCGCCCTGGGAATTCAAAGGGCCGCTACTCGCCTCACCGCCCTTAAGGTGCCTGTGGTGATCTTCGCTGAGCAGCAGCACGATGGTCCCACCAACACGAAGCACTCTGGCACAAAAAAT TCONS_00027220 TCONS_00027221 r 5' 0 TCONS_00024348 TCONS_00024353 TCONS_00024354 TCONS_00024351 s 3' 717 EMBV3_19598 CCTTTAGCGTTCTTAAAAGCCAAATGTTCTGTTTCTTCTTTTCGGAGCCGTGTAGCCGAT Gene BVV0102_358783 + 1 EMBV3_24953 GK000010.2:11344170-11349898 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015958 TCONS_00015960 TCONS_00015957 TCONS_00015959 1 XLOC_008596 Coding TCONS_00015959 XLOC_008596 Coding Coding STYX 10:11348072-11400000 j TSS11153 2752 1 TCONS_00015959_2 223 12 0.947233616423055 0.00182664393141489 0.00385623922048059 0.00246925018357833 0.00061970476348963 0.0015081364554189 2.10619917839081e-12 0.000691245852862407 0.001236320747921 3.80380847340792e-06 0.000213551872207378 5.06404274399594e-10 0.000678469826488183 4.9011432093262e-05 4.62827024612794e-09 0.00038419929191494 0.0019669829542932 0.00996047485791359 0.00143308020073606 0.00271651106381768 1.25332947928209e-05 0.000499634847019276 0.00263697642456335 0.000371021551394355 0.00285013362294955 0.000894512583361851 0.00295702633169996 0.00253501351970212 0.00060193935294632 0.000247463380291834 0.000779622641184317 XM_005193573.1 LOC101909380 PREDICTED: Bos taurus serine/threonine/tyrosine-interacting protein-like (LOC101909380), partial mRNA. 0.0 3076 100.00 0.619186046511628 NM_001130701.1 STYX Homo sapiens serine/threonine/tyrosine interacting protein (STYX), 0.0 1519 80.17 0.617369186046512 TCONS_00015959_2 sp|Q8WUJ0|STYX_HUMAN STYX_HUMAN Serine/threonine/tyrosine-interacting protein; 4e-164 457 97.31 0.995515695067265 1 noncoding 0 0 0 0 -0.030626610856273 0.820362109579612 0.00893322966154007 0.894608480207824 GGGCTCGTGTTGGTGCCAGAGCCTGGGCGGCCTGAGGGGCGCGGAAGCACGGGGGGGAGGAAGACGGCAGCAGCATGGCGGCCGGATACGAGCCGCCCAACCTTCTTCCCGGCTGTCGCGGCCGCTGTTGCCGGAGTCGCCGGGACCCTATAGTCTGCGTGTGTTAGTTGTAAGCCCGCTGCCTCCCGGTCAGTCCTCCGGTCTACCTTTCCTTTCACCGCCACTGCCTGCCCGAGGGTCGGCCGGCGGGTAACTCCCACTCCTACCCGGCCCCACCCACAAACCCGCGGGCCAGGACCATGGAGGACGTGAAGCTGGAGTTCCCCTCGCTCCCACAGTGCAAAGAAGACGCCGAGGAGTGGACCTACCCTATGAGACGAGAGATGCAGGAAATTCTGCCTGGTTTGTTTTTAGGCCCATATTCTTCTGCCATGAAAAGCAAGCTACCTATACTACAGAAACATGGAATAACTCATATAATATGTATACGACAAAATATTGAAGCAAACTTTATTAAACCCAACTTTCAACAATTATTTAGATATTTAGTCTTGGATATTGCAGATAATCCGGTTGAAAATATAATACGTTTTTTCCCCATGACAAAAGAATTTATTGATGAGAGCTTACAAAGTGGAGGAAAAGTTCTTGTCCATGGGAATGCGGGGATCTCCAGGAGTGCTGCCTTTGTTATTGCATACATTATGGAAACATTTGGAATGAAGTACAGAGATGCGTTTGCTTATGTTCAAGAAAGAAGATTTTGTATTAATCCTAATGCTGGATTTGTCCATCAACTTCAGGAATATGAAGCCATCTACCTAGCAAAATTAACAATACAGATGATGTCACCACTTCAGATAGAAAGGTCATTATCTGTTCATTCTGGCTCCACAGGCAGTTTGAAGAGAACACATGAAGAAGAAGATGATTTTGGAAACATGCAAGTGGCAGCTGCGCAGAATGGCTGATTCAAGAGCAGCATTATAGAGGATGTGAATTTCTATTTGAGGAGAAAAATACTACAGACAGTAATAATGTAAAATGTTTTATTATAAACCAAGAATTTTGGACTTGCAAAGAGGTATTATTGCAATAATGCACTTTTCATACTTGAAATTTATTTGTATGATATAAAGTTGTTACTTTAAACAAAATGCAAGTTAGGGGGGATTTGTTTATAAAATCTGGGTAATTTATAACAAAAGAATTTCCTAAAGTTTGCTAAAAATTCATTTTATGTTCTACATATTACATTTTAAAAATAATTTTACAGTTCAATTTTATGATGGAGCCTCTTACAGAAACATTAACAAATGTAGGAATCTGCCACATTTCTTTTTTAGTATAATTCAATAGTTTATCTTTTTTTAAACTTCTTGATCCCTTATTAATAATCTTTAAATCATGACAGCCAACTGTCCTTATTTTAACATGATCCAAGTATTGCTTCCTTTCCTATTACCTTCCTAATTTTATTCTGTAGAAAGAAAAAGTTTAATGAACAAAGGAAAATGTTTGCTTTATAATACCAGATGTTCACAAATACAAGGAGAGTTTTCAACTTTCAAGTGACTTTCCTTTAGCGTTCTTAAAAGCCAAATGTTCTGTTTCTTCTTTTCGGAGTCGTGTAGCCGATTTTTTCTTTGTCCAAAATGGTTCTAAATATAATAAACCAATGTAGCACTATTTTTCCTAAACAAAGCCCCAAAAAGAAAAGTGCCTTGCTTCATTAGAAAAAATAAGTAAATAAATCCTTATGACCTCTAAATTAGTATGTAGAACAGTGAAAAGTTTTGAACATTTTTCTATAATTTTTTTTAACCATAAATTAATTTAAACTGAAAGTCTTAAGGCTTGAAGAAACCTGAGTAAAATTATTTGGAATATGGAACATTTTACTCCTTCATTTTGTGTTGTCTTAATGATTCTGTGAGATTGTTCTGGCTCAGACAGTAAGTTTTCTTTGAGGATGCATTTTTTGTAGAAAAGTGATTGTGGAAGACTTCAGTGTATACAAATTAGTGTTGTAATCAGTTCTTTCTTTACATTGAGTTAATCCAAATTTCCCCCATAATTTGCATTAGCAAAGTCACTTTATGGATCCTAGGTTCTCCATGTTTTTATTTATACATATAAAAATTGTTCTTAAAAAAACATTTTTACTACTTTAAGTATGATGTTGGGGAGGAGAGGAGTGTTTTAACTTTTTATAGTTGATGATTTAGGGTAGCACGAATGAAACTCCTTTGTATTTCATTTTTCTCAGTCCTCTCTTGAGGTGCTTTACTGATGAGAGTGATTTCCATACCTTCCTTTGGTACCAAGAGGTACCCCATAAAGTAACCTATTATACCAACTTACCTACTTTGCTTTCCTCCCTAAGGTGAAGTAATACAGTAAGTTTTTTTATCCAGCATAACAGGAGAGTGGAAGTGAATCAAAACTGCTTTGTTAATTAAGCGTTAATTCTGTTGACCCAGGTGGTTTTCTTCTGATTCCTCTTCCCTTCCCCTATTTTACCACCCTAAAAACAGCATATTGTCAGTCCCTTGAGGTCTTGTATTCTGTTGTATGATTGGTGTGTTATATCATTGGGTGTGGTGGTCTAGTATAGTCAAGATTTGCATTGAGTGTTCAGAAATTCCAGTTGGTAAAGTGCCAGATAACACAGCTTCCCTGTATATAGATTACTATTGGGTAGGTCAGCAAAAATCTCTTTTGCAAACTAATAATCTATGATGCTCCTTCA EMBV3_09572 AAGGCTCTTCCCCCAGATATCCATACAGACCGTGCCTCATTTCCTTCAGGTCTCTGCTCA Gene BVT0102_152297 + 0 NULL GK000003.2:100061721-100065227 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179608 1 XLOC_109380 NonCoding TCONS_00179608 XLOC_109380 NonCoding NonCoding - 3:100063404-100064258 - TSS134367 854 3 TCONS_00179608_1 75 0.74824355971897 1 0 0 0 0 1.09393095552016e-05 0 8.3771748287554e-06 4.09721871647975e-05 0 0 0 0 0 0 0 0 0.000556684303697231 0 0 0 0.000218943018652014 2.132830799861e-05 0 0 0.00031409067625723 0 0 0 0 0 0 NM_001206044.1 AFAP1 Bos taurus actin filament associated protein 1 (AFAP1), mRNA. 4e-68 262 87.21 0.252927400468384 0 noncoding TAGCAAAATCTTTAGGCTTTGCTTTCAAGACATGCCCAGAATCTGACCACTGTGCCATCACCATCACTTTAGTGCAAGGACCATCCTCTCTCACCTGGTCTCCCTATAGACAACCAGCTGTCCTTGATTGCCTGGGATTGAGGGAGTTTCCAGGACATAGGACTTTTGATGCTAAAATCAGGGAAATGCCAGGTAAACTAGGACAAATTAGTCACCCTTAGGAGAGCTTCCATCCTTGTCCCCCACGGCCTATATTCCACCAGCAGTCAGAATGATCCTTTTTGAAAGTGGCGCTTATAAACTACCCACCCCAGTATTCTTGGGCTTCCTTTGTGGCTCAGCTGGTAAAGAACCCACCTGTAATGCAGGAGTCCTGGGTTCCATCCCTGGGTTGGTAAGATCCCCTGGAGAAGGGAAAGGTTACCCACTCCAGTATTCTGGCCTAGAGAATTCCATGGACTATACAGTCCCTGGAGTTGCAAAGATCAGAAACGACTGAACTACTTTCACTTTCTATACTCAGAACCCATAGTGACTCCCCGTCTCACTCAGATTTAAAACCAAAGTCCTCAACCAAAGCCTACAAAGCCCTGAAAAATCAAACTGCCTGTCCCCATGCCTCCTTCACACAGTCACTTCCTTGCTGTTCCACAAGCAGGGCAAGCATGCTCCTGCATCAGGGCCTTTCCACTTGCTGTTCCATCTGGAAGGCTCTTCCCCCAGATATCCATACAGACCATGCCTCATTTCCTTCAGGTCTCTGCTCACATGTCGCTTTATCTCTGTCTCTCTTAGCCTGTTGTTTTTTGCATAATGTGTTATTATCACCTAACATTATTTATTTATATTGCGCC TCONS_00170911 TCONS_00170912 TCONS_00170913 TCONS_00170914 . 5' 307 TCONS_00170911 TCONS_00170912 TCONS_00170913 TCONS_00170914 . 5' 307 EMBV3_19100 GTGCTGGAGCTGGCAGGTAATGCATCCAAGGATCCCTCACATCCACAAGTCTCTGATTGG Variant GeneID:613618|H2AFV:NM_001038197:55_cdna 290^393 1 EMBV3_20872 GeneID:613618 4 GENE H2AFV MGC133654 H2A histone family, member V EMBV3_37066 GGAAGATGGCAGCAAACCCTTCAGGACAAGCATTGCGCTCTCGAGACCCGCCCTCAACAA Variant GeneID:616784|SSBIP1:NM_001078064:59_cdna 97^199 1 EMBV3_07971 GeneID:616784 8 GENE SSBIP1 C8H9orf80 C9orf80 SOSS complex subunit C EMBV3_29753 ACGACTTTACGGCACCATAGTTTCTAGGATCGCTATAGTGCTGTTTGGAACTCCGCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26411 CCAGGAGATATTTAAGGTAAAAACAGACAGGGGTTTCCCAGGCCGAGAGGGCAGTGTGTT Gene BVT0102_389261 - 1 EMBV3_36664 GK000009.2:71629901-71635912 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22726 TCGACACTTCTGACACTTCTGTGGGTGGAAGGCTGCATGCAGGGGACAGCTTCTCTTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19092 TGGGGTTGCCCCTTTCGCCCATGACCCCACCTAAAAGCCAATGTAAGCGTCTTTTTCAGA Gene GeneID:281269|KRT8:NM_001033610:154_cdna Constitutive 0 NULL GeneID:281269 5 GENE KRT8 KRT2-8 keratin 8 EMBV3_04867 CAAGGTATTCAGAGCCTCATCAACTGCCCCCTAATCCTAAGCTCATTCACTGTGGGCTTC Gene BVT0102_123511 + 0 NULL GK000019.2:56347611-56353576 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094680 TCONS_00094679 TCONS_00094677 TCONS_00094681 1 XLOC_057516 Coding TCONS_00094681 XLOC_057516 NonCoding Coding FBF1 19:56345675-56349120 j TSS70762 2783 2 TCONS_00094681_3 122 0.1699604743083 3 0.192799070847851 6.7397173884127e-05 0.000804743170484163 0.000266027538504995 8.6675366685511e-05 0.00047605703247104 0.00037166238632332 0.00015533013867839 0.00035947404428294 0.000371503727719655 1.7741121776438e-05 8.22531912206007e-07 7.03242436458738e-10 0.000132397965772845 0.00010524914066256 4.88336230367232e-56 0.00111206104581476 0 3.29847172011675e-19 0.000737147133917926 0.00138370096128696 1.03161136550846e-28 2.05642463457072e-15 0.000926305724778785 0.000300141647765328 0.000238981092228512 0.000541313110386852 0.000657723112930911 1.99404004141169e-05 0.000150958355505725 6.02219078839435e-05 NM_001075642.2 FBF1 Bos taurus Fas (TNFRSF6) binding factor 1 (FBF1), mRNA. 0.0 2176 100.00 0.43298598634567 NM_001080542.1 FBF1 Homo sapiens Fas (TNFRSF6) binding factor 1 (FBF1), mRNA. 2e-40 172 72.07 0.113546532518865 0 noncoding 0 0 0 0 -1.79518298202718 0.0351279649749985 -0.0596337619431525 0.323124746028502 ATTGGACTTAGCAGCTGAGATCCCATGAGCATTTTCTGAGGCTTTTGAAAGCTGGATGTGCCCGGAAGCCACGGTGGCACCTGCCCCCGCCGTTCCTCGGTGCAGCCAACCGCCAGTCAGCCTGGGTCCCTCACACCTCTACGCCAAGCTGGTGCTGCTGAAACACACAGCTGAGCAGGACCGCGACTTTCTGGAGAATGAACAGTTCTTCCTGGAGACCCTGAAGAAAGCCTCCTACAACATGGCGTCCCACTCAGCCTGAAGGCTCAGCTGCCTCCTCACCAGAGGCTTCAGACCCTGCAACAGACCCTTTGGCCGCCAGCTCATAGCAGGGGCGCCTGGGAGAGCCCCTCAATGCCCAGGGCCTAATTACAGCTCTTCCTGTGGACAGGGTGCCGGCGGGTTCTTTGCGAGCCCTCCAGCCCATGGCTGAGGCAGGTGGGTGCGCCCAGGCCTCTCAGACACCCCAGGAGGCAGCAGCCTCTGGGGAGATGCCGTCCTGAGGGCAGGCAGCCCCACGACACTGTCAGCGGCAGCAGTGGATCTGCTATCCACAGACTTCTACCTCAGGACCCAGGGTCTGACTGGGCTCTGTGGGCCCCTCAGCCCATGGATGGTTTTAGAATCTTTTCATCTGGGCCTCTCCTGAGGCCGGGGGCTTCTCTACCCCCTTGCCACAAGGAATGGCCGACAGAGAGCATGGGGTCTCCCCGCTTTGGGGATGTAGAGTCAGGCCACACATGTTACAGGGCCTCCTGGCCTCCTGGCTGACGAGGTGGGGGAGCTGCAGGGACAAGGAGGGCGCCGTGCCTGGTGCTTTTACCTCGAGTTCTGACGTGCTCTTGGGGCTCAGCCAGCCCGTCCTGCTCTCAGGCTGGCACACAAAACCTGCGTCTCGTTCCCAGCTGCCAGGGCAGCCAGCTCACTGGCACAGACCCTGGGCTCATCGGCTTCTTCTGATACACTCCCCAGAGGGTGACGGGGTGCGGGGAAGGATGGAAGGCTTTTCTCCGTGCTGTTCACTGGCCGCAGAAGCCCAGCGGTGGGAATGAAGATGACAGAGCAAGCCCCTGTCTGGGAGTATACAGAGCGCTGGGGATCAGAAGGGGCCGCACCCTGGCTGCTGCCCGAGGTGGGGGGCTTTGCCCTTCTCCATGTACAGACAGTGGGCCAAGGCCTTCTAGAGGGGCACCAGGAGAGGGCTGAGGGGGTTGGTAGTTGTCTGCTGCAGACCCAAGGACTCAACTAATAAAATCGCAGTTATCAGAACTTCCCTGACAGTCTAGTGGTTAAGACCTGGCACTTCCACCGCAAGATGCGCAGGTTTGATCCCTGGTTGGGGAAAAAGAAAAATAAGCAGTTACCTCAAGAGCGGCTTCTCTCACCTCCCATCAGAGAGAACTGTCCGAGGAGCAGGAAGGTGGAGGAGGGCAGTGCCGAGGGGATCGTGAGGGCCCAGGGGCGTCTCTGCTCTTTGAGATCAGCCTCCAGCAGGATCTTGTGTTATTTACAACCTTCTTCCTGGACCCACTGAACTGCTATATCCTTCATGACTGGGTTCGTAGAATTTGCCACGGCTCATCAGAGTTGGAACCTATTTTTCAGAAATGTTTGTTCTGTAGGGCTGTTATTTGCTCTAAAACTGACTGGCTGGGACCCTCCAGCCGCCCCTGCTCTCCTGGCTGGACCGCAGGCCAGAGGAGGTTGTGATTACCACCCTTACTTCACAGATGAAGGGACTGAGACTCAGAGGTTAAATAACCTGCTCAAGGCGGCAGCAAACAGCCAGACCTGGGTTTGAGCTGTCCTTGGGCAGTTTCCAAAGCCCAGGGCGCTCAGCCATATCACAGCTGCCTCCTAGAAAAGTGTGCTGTATCCAGAGCTTTTGTGAAGTAGAAGATCCCCTACTGCTGCTGGGGGTGGTGCCCACACCCAGGAGGGGAGCATCCATGTGCTATTCAAAGCCTTGTTGAAGTTTGGGAATTCAGTCCTCTCAACACTCTTAATGAGTTCCCACCTGTGTGGTGAGCTGGGGGCGTGGCCTAAGGTTGGGCGTGGCCTAGGAGAAGCTGGCATTTAAGCAAGCACTTGACAGATAGATACATTGGTGATCACAGGAGGGGATCACATATGATGACATGCTGGAGGCTGTGCAGAAGCCCACAGTGAATGAGCTTAGAATTAGGGGGCAGTTGATGAGGCTCTGAATACCTTGTTAAAGTTTGAGCTTTTACCTCCAGGGCAATGGGTATGCAATGAAGGATTTAAAACAGCATGGAACCATACTTGTGGGTTTTTTAAATTAATTTTTTGACTGTGCTGCTGAGTCTTCATTGCTGCGTGCAGGTTTTTCTCTGCTGTGGTTCATGGGGTTCTCCCTGCGGTGGCTCCTCTTGTTGCGGAGCCCGGGCTCTAGGGCGCAGGCTTAGTGGTTGTGGTACACAGGCTGAGTTGCCCCATGGCATGTGGCATCCTCCCAGCTCAGAGATCGAACCCGTGTCCCCTGCACTGGCAGGTGGATTCCCAACCACTGGACCACCAGGGAAATACAACCATATTCGAATTCATGTTTTAGAAAACCTGCTGTGGGTGGAGCCCAGACTGACTAGAGCGGGCAAGAGTGGGGACAGGAAGGCACTGCGCTGGACATGGCACGGGGACCCAGGGTCTGACATGGAGGGTCAGGAAGGAGACTATGCCAAGGAAGACCCCAGCTTCCTGGCCTGGGCAACTGGGTGCCCATGAAACAGCCACGTAGAGATGTTCCAGGGGCACTGAGTCAT EMBV3_30064 AGGAAGATTAAATGCCACGACAGTCCTTAAAGAACGCCGCAGCTCACTGCACGTTTCCTC Gene GeneID:100299557|LOC100299557:XM_002690545:80_cdna Constitutive 0 NULL GeneID:100299557 10 GENE LOC100299557 NULL hypothetical protein LOC100299557 EMBV3_35380 AGCCGCAGGCCGAGGAGGGTTCTGGCTGCAATTTCTTCTCCATCCCCTGGTGCTTGTTTT Gene GeneID:510430|RTP1:XM_002684841:190_cdna Constitutive 0 NULL GeneID:510430 1 GENE RTP1 NULL receptor (chemosensory) transporter protein 1 EMBV3_27667 TACTAATGTCTTAGCATGGTAAAGTTTGCACATTAACAGGAATTAAGACTGCAAAGCAGG Gene GeneID:541171|MGC143035:NM_001083500:186_cdna Constitutive 2 NULL GeneID:541171 3 GENE MGC143035 NULL hypothetical LOC541171 EMBV3_05582 CTGAGGACTTCAGAGACTAAGGGGAGTGGAGATGGAGCTCTGAACGGGGCTGTGATGGCA Gene GeneID:505101|NLRP6:XM_002683733:11_cdna Constitutive 0 NULL GeneID:505101 11 GENE NLRP6 NULL NLR family, pyrin domain containing 6 EMBV3_16080 TCAAAAATCTTCTACCAAGCAGCCAGCTGTAGGGGGCACAAGCTCAACTCCTAGAGCACA Gene GeneID:517876|ARID2:XM_002687323:138_cdna UTR3_Alt 2 NULL GeneID:517876 5 GENE ARID2 NULL AT rich interactive domain 2 (ARID, RFX-like) EMBV3_10560 GGGGAAACCATGCATCTCTCCTACCCAAAGGGAACCTTAGGACTTGAGGGCTTTATTCTG Gene BVT0102_361947 - 1 EMBV3_32689 GK000016.2:42409769-42440210 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00645 ACCAGACCTAGCTCCAGCTGAACTCCTGCTTCTACTGCGGACATACCTCCCAGATGAGTT Gene GeneID:511792|HPS6:NM_001081586:114_cdna Constitutive 0 NULL GeneID:511792 26 GENE HPS6 NULL Hermansky-Pudlak syndrome 6 EMBV3_33572 GATGGCTGGATGACATAGTGGACTCAATGGACATGAGTGAGCAAACTCAGGGAGATATTG Gene BVT0102_304533 + 0 NULL GK000015.2:281448-306539 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10139 CTCGGGTCCTACAGTCCACGGTTCCCCTGTGTATCCACCAAGAGCAAATGTGTGTAAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28840 TCCTGGGAAAGGAGGTAAACGACACGAAAGCGTGGACTGAAATAAGCCAAACGCTGGTAG Gene GeneID:786095|LOC786095:XM_002695699:285_cdna Constitutive 0 NULL GeneID:786095 19 GENE LOC786095 NULL similar to retinoic acid early transcript 1E EMBV3_43156 TGAGGCCGAGTTCCAGTCGCTGACCCCCAGCCAGATCAAATCTATGGAGAAAGGGGAGAA Gene GeneID:616380|C28H1orf198:NM_001040592:108_cdna Constitutive 1 NULL GeneID:616380 28 GENE C28H1orf198 C1orf198 FLJ14525 chromosome 1 open reading frame 198 ortholog EMBV3_23410 ACTCTGGAGACTATCCCCTTCAAGAGTGGCCAAAGGCAAATCCAAGCGAATCTGAGGAGC Gene GeneID:514767|TGM5:NM_001102009:238_cdna Constitutive 0 NULL GeneID:514767 21 GENE TGM5 MGC151861 transglutaminase 5 EMBV3_37118 CCATCGCCACGGTTTCCCTCTGCCGTTTTTAAATATAAATTATTAGTTTACATCATTTTT Gene GeneID:538533|TIA1:NM_001076109:56_cdna Constitutive 1 NULL GeneID:538533 11 GENE TIA1 MGC143006 TIA1 cytotoxic granule-associated RNA binding protein EMBV3_43098 GGAAAGACCTCGAAGATTCTGCTACCGATAAAATGCAGCCTTTAAATTCACATATGTAAG Gene GeneID:281790|GNAI1:NM_174324:5_cdna Constitutive 2 NULL GeneID:281790 4 GENE GNAI1 MGC128528 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 EMBV3_22144 TTCACCTGAAGTCAGTAAACATTAGCAGAGGGCCCACCTCATGCCAGGTTCTGTGTCAAG Gene BVT0101_061732 + 0 NULL GK000001.2:115480296-115834617 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004935 1 XLOC_001144 Coding TCONS_00004935 XLOC_001144 NonCoding Coding - 1:115564781-115567786 - TSS2446 2842 3 TCONS_00004935_5 84 0.194581280788177 2 0.0545938748335553 0.000673951602850745 0.000763727332365533 0.000854054419287542 0.000243064544256354 0.000372937999294123 0.000178707350883328 0.000758836304930562 0.000330714592433886 0.000451574687724881 1.36671648638581e-05 1.01185808172906e-06 1.35339112383222e-05 0.000173466529849495 3.97241247125622e-05 5.52422398414769e-05 1.23847539662002e-50 2.16193036875631e-61 2.38220148151596e-56 0.000404058839410723 0.000906211325806516 0.000202575668259257 2.57438416495441e-07 4.51922732249743e-05 0 0.000270404796970937 0.000585475144705184 0.000776567974193068 4.32461906626402e-06 2.60098154761935e-05 2.11549418260934e-06 XM_002698914.3 FUT11 PREDICTED: Bos taurus fucosyltransferase 11 (alpha (1,3) fucosyltransferase) (FUT11), mRNA. 4e-94 351 92.31 0.085503166783955 NM_018036.5 ATG2B Homo sapiens autophagy related 2B (ATG2B), mRNA. 5e-35 154 79.21 0.0591133004926108 0 noncoding 0 0 0 0 -0.21189344178304 0.196094404844534 -0.00111911662281143 0.980459892885671 CCTTCCGCCTCAAACTTTCCCCTATTTAAAAGCAAGTTCTAACTGCTTAATGTCAAGCATAGTTCACAAATTCAGGATCGTGCTTTCCCTGGGTACTCTTGAATAAATTGCTTTTGCTGGTAGAAAAAAGAAAAAGAAAAGAGACACAGAAATACTACGTAGAATATACCATATGGGAAAACACAATTTCTCACTCCACCTCGGGTCCTGCAGCCTCCCCGCAGAGTCTCTCATACACTCTGTGCGAACTAAGAACCCCTAGGAAGCCCCAGGATTGGGGCGAAGCCCGGCTGGTTTCCCCAAGGCCTAGGGGATCCGCTCTGTGCAGGCGGTTGTGTCGCCCTGAGGGACGGCGTGAAGCAGGAGTAGTAGATTGGGTCCTCCCAAGCTTGGGTCCTGCAGCAGACTGGAGCAGGACCCGGGACCCCTGGCCGAGGCCCCGCAGGCCCAGTTGCCAGTCCTCATCATACAATGGACGTTTTCTGGGTCCATGAAGAAGAGGGCCTGTCGGTACCTGCTACAGAGGTACCTGGGCCTCTTCCTGCACGAGAAGCTGAGCCTGGAGCTCCTCAGCCTGGACTAGATCCTTGAGTCCCTCGCCCAGGTCCTCAGACAGAAAGTCTCCATGTTCTAGAAACTTAACAGAGGTCGTGGCATCTACACTGTGGCAGTCAATTAAGCATGAAGCTGGCTTCAAGGGGTGCATCCATGGAAGGAAGTGACCAGTGCTGAGCCTTTTAGGAGTCGTCACAGAGTTCTGTGCAGACAAACCGTATTTCATGGGATGAGACCTCCCGAGAGATTAAGGATGAAGAAGGTCTTTGAGAATATCGGAATGCCTAAGTTATTCCTGTATTTACTTGGGGTTGGTTACTTGCTTGTGGCAACCTATGTACAGCGTTTGCCTTCTGGAAGAAAATAAGTGAAGGCCTCCTCTGCCGGTTTGCCTGCTTTTACTTGATGATGTTTATGAGATCAGCCTGTGGGTGGAATGGTTGTGCCCCCCCCCCCCCCCCATTGTGCTATTCGGTTATACCTGTTTGCTTCACGTGACAAATCCTAAAAGCAGGTGTTGCAAATGGCGCTGGTGTTGGCGATCTTCAAACATTCAAAAGCTTGTTTTCTACTTGTCCAGAGGTGGCGAATCGACTTGCCTTAACAGGTGCTTCTCCTGTAGTTCACCTCACCACATCCAGCTGTGTCTGTATGTTCAGTGCATCATATTTGCTTCATGTGTATCCAGCCTTGAGTTTGGCAAGAACGGAGTGCCTTTCCCACTTCCCCCAACTCTATGTACTGCTAGAATTTGCTGCTTACCATTTGAATTGGTGTGCCACTCTAATATATTACTATTCTAAAAGTGTTCCTACACAGTTTTCATTTAGGAAATCATAAACATAGGTGAGCTTCCTGTGGTGGTTAGGCAAAAGAAAACTTTTGTCTTAATTTAAGCTGTGTAAAAACCTTAAGCGCTTATTTTTTAAATTTATTTTATGGAAAAGTATTTTAACTGAGTAATAACTTCCTTAGCCATAGAAACCTGAAAAACTCAGATTATCATTAACATTTATTACAACCCTAACATTAATTTGTACTACTCTAAATAAGCATATAATTGTATCAGCAAGTATATGACTTAACCTATGCAGAGTACACAGGATAGTGGAATGAGCCCTTGAGTAGCAGAAATACCCAGGCTAGTTCATCCTGCCACAGTCAGCTGACAGTGGACATAGTAATTCACCTGAAGTCAGTAAACATTAGCAGAGGGCCCACCTCATGCCAGGTTCTGTGTCAAGGTACTGGTAATTCTTATCAGAAGACAGTGACTCTGATGGATATTTTTAAATTCATTGACCCATGATTCTATACTTTTGGTACAGTTATGAATATGGTGTCTTGAAGGAGGAAGGTTGCAAAGGTTGGATATTTATTAACCATCTTTTTTTGTGTCAAATGACTTTGTACCCATTATTCTTTATTACTTTTCACATTAACCCTATTAGCTGGGTATTGTTATTTCCATTTTACAGTTGGAGTTAAATAATTTGCCTGAAGTCACACTCCTGTTTAATTCCTAAGCCTATTATTTACGTATTAATCACATGGCTTCAAGCCAAGGAAAGAGCAGTTAATGTTATTGAGCATCTGTTTACTTCAGGCACTGTGCTAGGCACTCTCATTTGTGTGGTTTTATTTAATCATGGGGAATCAGAGGTGGTAATATTTGAATTTTACAGTTTGACTTAAGAATCATTGGAAGAATAACTTGTGAGTGGACTTAATCTGAAGGTTATGTTTTGTTCTGCTCCTTATAGGTGAGGGATATACCCAGTTAAAATGATAATGTTAAATAAAGCATCCAGTAAAAAACAAACAGAAATAACAGAATTTCTCCTTTCTCTTTGAATCTACTTCTCTTGTCTAGTTCAGTGAAGGCACCGCCAGCTGCCCTTGAGTCAGCAAATCTGTGGCTATCATTCTTGACTCCTCCCTTTACCTTACCTCACATCGGCTACAAAGTTTACAAGTGCACCTTGTAAATATCTCTCCAATTCATCTGTGTTGTTTCATCAGCTGTGTCACCAATGAACTCTTTTTTTTTCAAATTTATTTATTTTAATTGGAGGCTAATTACTTTACAATATTGTATTGGTTTTGCCATACATCAATATGAATCCACCACGGGTGTACACGTGTTCCCAATTCTGAACCCCCTCCAACCTCCCTCCCCCTACCATCCCTCTGGGTCATCCCAGTGCACCACCCCCAAGCATCCTGTATCCTGTATTGAACCTGGACTGGCGATTCGTTTCTTATATGATATTATACATGTTTCAAT TCONS_00001893 r 5' 36973 TCONS_00001893 r 5' 36190 EMBV3_26991 CCGCTACATTGTGTCTGGTTCAGAGAAGCTGGAAATACTGCCCGAGGAATTGGAGCTCTG Gene GeneID:528166|LOC528166:XR_083974:344_cdna Constitutive 0 NULL GeneID:528166 19 PSEUDO LOC528166 NULL similar to NLR family, pyrin domain containing 1 EMBV3_16620 TTTACACTTGTGCCCCAGCTCTCCACGAACTGGAAGGGAACGTGACCCTGAGCATTCCAA Gene GeneID:616575|C19H17orf78:NM_001099158:286_cdna Constitutive 0 NULL GeneID:616575 19 GENE C19H17orf78 C17orf78 MGC166187 chromosome 17 open reading frame 78 ortholog EMBV3_42155 CAAAAGCAAGACTAAAGTCAACAAGGATGGTGAGAACCAGGAGGTCGAGATTGCGCGCTG Gene GeneID:100139910|PRKAR2A:XM_002697046:510_cdna Constitutive 0 NULL GeneID:100139910 22 GENE PRKAR2A NULL protein kinase, cAMP-dependent, regulatory, type II, alpha EMBV3_22082 AAACAGATGACCTGCTCCGGGATCCCAAAGGGTTCAGCACCTTGGCCCAGCTGAAGCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10771 CTCCTGAGGCTAAAGCAAGAGGACATCCACGTACAGCTCAGCAAGAGAAGCTTGGATTCT Gene BVT0102_378446 - 1 EMBV3_22046 GK000008.2:44892130-44898337 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225161 TCONS_00227509 TCONS_00225156 TCONS_00225164 2 XLOC_137696 XLOC_138259 Coding TCONS_00225156 XLOC_137696 Coding Coding PGM5 8:44671343-44894637 j TSS168648 5605 1 TCONS_00225156_4 538 0.0945584299732382 11 0.974947714437981 0.000252855184010991 4.69448982118069e-06 9.96698434225032e-09 1.69401930975068e-05 7.53955536956906e-05 1.60305171688907e-29 3.04049978045352e-07 1.0463522601331e-31 4.99515295641726e-08 7.42050735581048e-27 5.26394619966889e-09 1.11024605597347e-14 4.84850444618571e-06 3.11217583550613e-13 1.9447881718461e-11 3.80585122578451e-11 1.52545805312727e-14 1.35456401540584e-13 3.36740318439114e-07 0.000137211745578194 2.46685959740709e-12 9.38725983131831e-15 1.14187954584691e-05 2.73780954608889e-14 0.000116951229132742 0.000126132739616294 9.28338822157476e-05 1.29679209025182e-10 3.25983333576552e-20 1.02944709979321e-14 NM_001102335.1 PGM5 Bos taurus phosphoglucomutase 5 (PGM5), mRNA. 0.0 5099 100.00 0.504192685102587 NM_021965.3 PGM5 Homo sapiens phosphoglucomutase 5 (PGM5), mRNA. 0.0 2962 83.30 0.504192685102587 TCONS_00225156_4 sp|Q8BZF8|PGM5_MOUSE PGM5_MOUSE Phosphoglucomutase-like protein 5; 0.0 980 93.54 0.947955390334573 3 coding 0 0 0 0 -0.129591152806084 0.309122413073442 -0.0277488394487839 0.596630570280949 AAGCAGCAGTTCTAGTAGGAAGAAACTCCCCGATCTGTGTCTTCCGTTTCTGGATGCCGTTCCTCAGAGAGCCAGATTTCAGCAGAAAGAGTTGTTAATGGTGGACTTCGGGCAACCGAAACCCCATGGGAAGAACAAGAAAGATGGAGAAAGAGGGGGTACTGTCATGATCTTCAACACTTTATTAGAGGCTGTTGATGCTAGAATAATCAGTCAAGATGAACAAAGGCACTCACTTTGGATGAAAATGTTACCTTCTCTTGCATTTCAGATTGGTCGACTGATCATTGGACAGAATGGCATCTTGTCGACGCCTGCTGTGTCCTGCATTATCAGAAAGATCAAGGCAGCTGGTGGAATCATCCTGACAGCCAGCCACTGCCCTGGAGGACCAGGAGGAGAGTTTGGAGTGAAGTTTAATGTTGCCAATGGAGGTCCTGCTCCAGATGTCGTCTCAGACAAAATCTACCAAATCAGCAAAACAATCGAGGAATACACTATATGCCCTGATTTGCGAATTGACCTGTCTCGACTAGGAAGACAAGAATTTGACCTGGAGAACAAATTCAAACCATTTAGAGTGGAGATAGTGGACCCAGTGGATATCTATCTCAACCTCCTTCGGACCATTTTTGACTTTAACGCCATCAAGAGTTTGCTGACCGGGCCCGGCCAACTGAAGATCCGAGTTGATGCCATGCATGGAGTTATGGGACCCTATGTGAGAAAAGTTCTGTGTGATGAGCTGGGGGCCCCAGCCAATTCTGCAATCAACTGTGTTCCCCTGGAAGATTTTGGAGGGCAGCATCCTGACCCAAACCTGACATATGCAACCACCCTTCTGGAAGCTATGAAAGGAGGGGAATATGGATTTGGAGCTGCATTTGATGCTGATGGGGACCGTTACATGATCCTAGGCCAAAATGGCTTCTTTGTGAGCCCTTCTGACTCCTTGGCCATCATTGCCGCCAACCTCTCTTGCATTCCATATTTCCGTCAGATGGGAGTCCGAGGGTTTGGAAGGAGTATGCCCACCAGCACAGCCCTCGACAGAGTGGCCAAATCAATGAAGGTCCCTGTGTATGAGACCCCAGCTGGATGGAGATTCTTCTCAAATCTGATGGACTCGGGCCGGTGCTCTCTGTGTGGAGAAGAGAGCTTTGGCACTGGCTCTGATCACCTCCGGGAGAAAGATGGCCTCTGGGCTGTCTTGGTCTGGCTCTCCATTATTGCTGCCCGGAAGCAGAGTGTGGAGGAAATTGTCCGAGATCACTGGGCCAAATTTGGCCGCCACTACTATTGCAGGTTTGACTATGAGGGATTAGAGCCCAAGACGACCTATTACATCATGAGGGACCTGGAAGCCTTGCTCACAGATAAGTCCTTCATCGGCCAGCAGTTTGCTGTGGGGAGCCATGTGTACAGTGTGGCGAAGACAGACAGCTTTGAATACGTGGACCCTGTGGATGGCACCGTGACCAAGAAACAGGGCCTGAGGATCATTTTCTCTGATGCATCTCGGCTCATCTTCCGGCTCAGTTCCTCCAGTGGTGTGCGGGCCACCATCAGACTATATGCAGAAAGCTACGAGAGGGATCCCAGCGGTCATGACCAGGAGCCCCAGGCAGTGCTGAGCCCTCTCATAGCCATTGCGCTGAAAATATCCCAGATTCACGAGAGAACTGGCCGGAGGGGCCCTACCGTCATCACCTGAATGGAGGAAAGATCACTCACCAGGGCCAAAGAGTGCGCTCAGCGGGGGACACTTCACTCATGCCTTCTTGCTTCCTGTTTGTGCCTCTTATGACTTTGAAAAAAAAAAAAAATGATTTGCTGGTTGTGGGGGGTGGGTGGGTGTAGGTGGGGGAAAAAAATCTGTTTTGTTTGGGTTTTAGTCAGTTTCTGCAATGCAACAGGGTCTTCGGTTGTCTGTGAAAGCCACACTGCCTTTCGATACCTGTGCTTTGTCACAAGAGGGAATTTGCCCTTTTGATAGAAAATAAGTGGGCCAGGAGCAGTCAGGGTATCTGTGCATCATTGGTGCCAGGTGAGAGAAAGTTCTGGAATAGCGGAGAGGGCAGTGCCAGAAGTCAGCTGACCCTAAGCCCAGGTCCGCTCAGGCAGACCTAAGAAGACTCTCCTCCTTTTCATCCCAGGTTAGGTCTCCCTTGGGCAAAAGTTGTGCAACTCCTAGTAGCCCACCTCATGCCCACCAACCACTTTATGGCCACTCACTCTCCTTCCCATCTCCAAAGTGCCTGTGCCACCCTCTTCACATCTTCTAGAGCTTTCCACAAACCACAATGGCACACTTTCAACAAAACATATCAAAGGGTGTTTTTTCTCTCTTATTTTGTAAATAGTATTAGCTATTAAGCTGGCTGCATTCCTTCAAATTCAGCCATTCATTATGCAGGCGGGAGGCAGTTTCCTGGCAGGATTCTGAGAATGAATGCTGAACATTTTCAGGCCCTTCCTTGATTATATCACATGGGTTGATACATGGGTCGATCTGATTCCCGTTGAGATGGCAAAATACCACCACATCGGCTCTCTCTCTGACTTTCTCTCACTGCTGTCTTATCTCCCAGTGAGGGTCTGCACTTGTTTGGACACTGTTCAGATCTTACTTATCGTGGCTGTCAAAGGAGACAGTGACATGCTCCACAAGTAGGAGATGAAGCGGATGCTGGAAGAGAACCTGACTGGTGGCACCGGGTGATGGCCCTAATGAGATGGAGGGGAGAGTGGGGCCCCCTGCTGGAGAGCAGAGGGTCACAACTGGCTTTCTTGGCCCAGAGAAAGGATATTGCAGCCCTGGCAGCCTCCATCAGCCCTCTCAGCCAGAAGCCTGGGTTCACGGGACCTGTTTGCGCATGTTTTGCTTCCTTGGGAACGGCAGTCACTTGCCGTGTGACTGGTGAGATAGGTTATGCGCTTTGACTGTTCAGCAGTGTGTTATTGCTGTAGTCAAGATTAGGGCAAGCAGGGAAACATCCCCAGCAAGGTGTTTGTTTCCATTTTCTATCTATGCTTCTGTCAGATACTTGCTAGGACCTTTATTAGCCAATAAAAAAAATTTCTGATTTCAGCCTTATGCAAGAATTGTGGATTTTTGCTTGTTTTGTCATTTGAGAAACTCCAGTAGTGGTCACTCTTCTGATAGGTTTGCCTTTTGGAACACTTGCAGGGCTGGTTTTCCTTATGACGACCTTGGAAATTTAGTAAATAGAACTGAGAAGGCACAATGCTCAAAACCGCCTTTCGGCATCAGAAGCATGGTATCTAACCTTTCATCACAAGTATCTTCATTTCAAAATAGTAGGAGAGTGGCTTTGAGCTGAGAGTCTGAGGAACTAGTTATAAAATTCATCAACAGTGGAATACAACTTGTCTTGTTGCTTTGGTTCTCAACATGTTTAAAGTGGAGGTCCATGACAGTCAGCATGACTGGGCACACCCTCAGGCTTAACAAAGCCTATGTTTTTCTTCAATATTTTTTTCTCAAGTTTTTGAACTTTTCATCATCTCTAATTTTGAAGTCCCCAGGTAAATCAATCCTCACTTTAAAATTCTGTTTCTTTATTTCAGTGTGGAGTCATATGTGTCCAACAGCCCAAATATGCATTCATTCATTCAGCAAGCACTCCTTGAACAACTGCTCTATGTGGCATCCTGGGTTTCTTGGTGCAGCACATGGATGCATAAGATTCTATTCCTACTCCTGTGAGTTTGTAGTTTGGAAACAGGAGGCTGTGGTAAACATGCATAAAGAATCAGGTAGACATGAACTTTACAGCAGCAGCACAAGCAACCTGCTGGAGAGTACACAGAAAGATTGACTCCGAGATGGAAGGTAGTAGGCAACTAAGGTGTTTCCCAAGGAGTGGAGATTCCTGAGCCTGATAATTGCTTACAGAATTTCGTCAGGGGTGAATGCAGCAAGAACAAGGCTGGAAATTGAGAGGTAGAATGACTGGAGAGGAGGCTTGCTTTGAGTCTAGTGAGAGGTTGGCTTGGATGAATGGGATTGAAGCAGACACAGCATTACATATATCAGACCGAGCAAATGCTTGGGTCCAGCTTCGGAAAGCAGCAGCTGCACAGCCACCTATTTTTATGAGCTTTTTCTCAGCAAGGCTCCCAAAGGGAAGGTCCTGTAGTGGCTCAGGACCCAGCCTGCCTCTGGATCCTGCTCAAATTCACATTGCCAAAGTATGATTTCTGCTCTACATAGAATCCAAGCTTCTCTTGCTGAGCTGTACGTGGATGTCCTCTTGCTTTAGCCTCAGGAGAGGTGAAAGACAGGAAGTCACCCTTCTGCACATGATGTTCCTCGTGTTCTTAAAGATGGAGCTGCAACTGCCAGTCTCACTTAAGAGTAAATGATTAGAGAGGTCCAAGAATGTTGTGGGGACTGCAGGAGATGATCCTAGAAGGGACAATGAGTAGAGTGTGGCAACTGTCTGGACCACCCTTATGATCAGCTAGTATTGAGAGATTCACTCACTACACCATATGCAACAGTGTATATAATGCAGTGATTCTCAAATAGGGCAGTGCCACTACCCACCCAGGGGGTGTTTGGAGATGTGTGTGTATATGTGCCAGGGAGGTATTTACTGGGAGGGAAACAAGGACGTGAAATATCCTGCTTAGTGTCAGCCAGCCCCCTAGATCAAAAAAGTTGTTTTGCCTCATCTGTGATTCCTGAGTTTATTGGCTGACCTTGGAAATGGATAGACAGTCATTATTAAAATAAGATCCCTTATCAATTTTACTGATCTGAGATGCAGCCCACATCTACCATATTCACGGGATGAATAGTGCTGAATAACATTGCAGGCTGAAGGGTTTGCGTGTGACCTGAAGGTTTTCCACACAGGAAGCCTCAGATTGATGACCCGTCCCACGGCGGCATAATGGGCTGACAATTGGCTGCACTGAGCCAGCGTTCTCTGCAGGCAACATAGGCAATGACAGGGTTAATGGCTTGGTAACTTCTGATTGGCCAGTGTGGCTCAATGTAAGGCATGTCCATCACTCGTGTAGGGCGTGGGGAATTTGAAACGCACCTGTGAAAACCGGTAGCGCTACAACAGGTGCCTCCATTTCATTGGTTGATCACGCACCAGGTACTTGTGAAACACATGGGAGCTGATATTCCAGATACCAGCCTTGAAGAGGGTTCCATTCCTGAGTGGTGAAGGGTTACAGAAATCATGCACCTTTGGAAATGAACTTACTGCTAGTGTTTCAGTCTTTGGCCCTTCAACAGTTAGACACAGCAAGAAATTATCCAAGGCAACAGAGCTACAGTCCATGGGGTCTCGAAGAGTCGGACACGACTGAGAGACTTCACTTTCAGTTTTCACTTTCATTCACTGGAGAGGGAAATGGCAACCTACTCCACTGTTCTTGCCTGGAGAATCCCAGGGACATGGGCTGCCGTCATATGGGGTCGCACAGAGTCGGACACGACTGACGTGACTTGGCAGCAGCAGCAGCAGAGCTCAGCTGAACCCCTGCTCCACTCGCACCGGCTGGAGACTTCAACGGCCGATGGCTCCTGCGGCTGACGGCAGGCCCACTCGGTATGTGAATC EMBV3_21625 TGTGTGATGATGCTATCCCTGGAGGCTCTGGAGAACTGGTTGTCATGCCCATTTAGGTGG Gene BVT0102_398117 - 1 EMBV3_37047 GK000007.2:49101626-49155493 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213353 TCONS_00213351 TCONS_00213350 TCONS_00213352 1 XLOC_130433 Coding TCONS_00213352 XLOC_130433 Coding Coding SMAD5 7:49103649-49202775 j TSS159847 1269 1 TCONS_00213352_4 265 0.134751773049645 6 0.987258511979824 0.00684558235859459 0.00520274972743629 0.00286559798200491 0.0035539938432802 0.00295075683884107 0.00122301265974848 0.00316509287698664 0.00100821555676067 0.0028731069048461 0.00080630034870246 0.000367552486864489 0.000192828639220247 2.26264433436685e-130 0.001809894313903 0.000812588920923113 0.00323117038236052 0 4.91892594534117e-68 0.00261523008079913 0.00168544031809022 0.00319088243958155 3.39824476958414e-05 1.97591081776329e-21 0.000174913997923768 0.00464033431874775 0.00796071451670185 0.00263660182454552 4.81593744429611e-05 2.7073182963631e-05 0.000182638086854899 XM_005209390.1 SMAD5 PREDICTED: Bos taurus SMAD family member 5 (SMAD5), transcript 0.0 1707 100.00 0.74468085106383 NM_001001419.1 SMAD5 Homo sapiens SMAD family member 5 (SMAD5), transcript variant 2, 0.0 1442 93.86 0.743104806934594 TCONS_00213352_4 sp|Q99717|SMAD5_HUMAN SMAD5_HUMAN Mothers against decapentaplegic homolog 5; 2e-171 487 97.74 0.99622641509434 1 noncoding 0 0 1 1 -0.00598023016783673 0.953372942307192 0.00368147817898309 0.947564491246144 CACTCAATGCAGAGATGCCGGTTTGAGGATGGAGGGGGCCAAGTGAGAAGTCACACAGATGGCTCCCGGGAGCACGGAAGAGCCTCGCTGCCAGCCAACAGGCAACGGGGCCCTCAGACCTTCAACAGCCCCCACCTAAATGGGCATGACAACCAGTTCTCCAGAGCCTCCAGGGATAGCATCATCACACAGAGGCCCTTCCTGTCTCATGTCATTTCAGCTGCAGCAGAAATCGTCCTCCAGGTCGAGAGGGCTTGAACCAATGAAAGAAGCTTCTGGCACTTATGAAGATAAAGGTCACTCCTTCCTTTTAAATTGCAGCTTTTGCTTAGGGCCTGTATATGACTTTTCACCTGTCATCTGTATGTTCAGTAGACACTGACTTTGAGTTGCAGAAAGGTTTCTGAAGATTTAAATCAAATGACGTCAATGGCCAGCTTGTTTTCTTTTACTAGTCCAGCAGTAAAACGATTGTTGGGCTGGAAGCAAGGTGATGAAGAGGAGAAATGGGCAGAAAAGGCAGTTGATGCTTTGGTGAAAAAACTAAAAAAGAAAAAAGGTGCCATGGAGGAACTGGAGAAAGCCTTGAGCAGTCCAGGACAGCCCAGCAAATGTGTCACTATCCCCAGATCTTTAGATGGACGCCTGCAGGTTTCTCACAGAAAAGGCTTACCCCACGTTATATACTGTCGTGTTTGGCGCTGGCCTGATCTGCAGAGTCATCATGAGCTAAAGCCATTGGATATTTGTGAATTTCCTTTTGGATCTAAGCAAAAAGAAGTTTGTATCAACCCATACCACTATAAGAGAGTGGAGAGTCCAGTCTTACCTCCAGTATTAGTGCCTCGTCATAATGAATTCAATCCACAACACAGCCTTCTGGTTCAGTTTAGAAACTTAAGCCACAATGAACCGCACATGCCACAAAATGCAACGTTTCCTGATTCTTTCCATCAGCCCAACAACACTCCTTTTCCCTTATCTCCAAATAGTCCCTACCCGCCTTCCCCTGCTAGCAGCACATATCCCAACTCCCCAGCAAGTTCTGGACCAGGAAGTCCATTTCAGCTCCCAGCTGATACTCCTCCTCCTGCCTATATGCCACCAGATGATCAGATGGGTCAAGATAATTCCCAGCCCATGGATACAAGCAATAATATGATTCCTCAGATTATGCCAAGTATATCCAGCAGAGCTCCAAGACAGACACTCTACTAGTGCTGGATGAAGAATTTCCACGTGTCTCTTCCATCCATTGTGTCCATTAGG EMBV3_30415 CTTTTGGGACCGCTGTCTCTCCGTCATCAACCTCATGAGCTCCAAGATGCTGCAGATCAA Gene GeneID:282173|CDK5R1:NM_174512:182_cdna Constitutive 0 NULL GeneID:282173 19 GENE CDK5R1 P25/P35 cyclin-dependent kinase 5, regulatory subunit 1 (p35) EMBV3_16186 CCAAAGAGCTAAGCCTGACCTTGCCAGCTAACAGTGGGATCATTGTAGCCATGCAGAGAA Gene BVT0102_081531 - 0 NULL GK000003.2:110428640-110466754 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174715 TCONS_00174714 TCONS_00174711 TCONS_00174713 TCONS_00174710 TCONS_00174712 1 XLOC_104671 Coding TCONS_00174710 XLOC_104671 Coding Coding EIF2C1 3:110456952-110492729 j TSS129593 12634 1 TCONS_00174710_4 782 0.0635586512585088 19 0.647389311270125 2.63250389119199e-05 0.000555783569171139 7.37269693635418e-05 0.000425223879820485 0.000495386993831688 0.000119959052620147 0.000201111700936041 7.07952469710325e-06 0.000142673989119312 0.000104268946511259 1.4539588691272e-05 1.80192222569452e-05 4.92692702208542e-05 6.63442620626814e-05 0.000185453204568751 0.00238688966600862 0.00054178449092261 0.00118116814275959 0.000440151486784634 7.89957940217666e-16 0.000224224317267199 5.12004683601148e-08 0.000570741326243697 0.000234932826069256 2.56322880688867e-07 1.0626505547209e-07 0.000243272186416294 1.32385942280352e-07 0.000114945038833131 0.000353753414084519 NM_001205899.1 EIF2C1 Bos taurus eukaryotic translation initiation factor 2C, 1 (EIF2C1), 0.0 5036 99.93 0.22146588570524 XM_005270747.1 AGO1 PREDICTED: Homo sapiens argonaute RISC catalytic component 1 (AGO1), transcript variant X2, mRNA. 0.0 9129 87.73 0.577568466044008 TCONS_00174710_4 sp|Q9UL18|AGO1_HUMAN AGO1_HUMAN Protein argonaute-1; 0.0 1634 99.87 0.998721227621483 3 coding 0 0 0 0 -0.115257370819892 0.475468911409037 -0.0290819269973804 0.661721626242749 GGATGGTGATGAGTGAAGTGAGCATCTAGCTGACAGCTGCAGGCGCCTACCTGCCCCCCCTGCAGCAGGTGTTCCAGGCACCTCGCCGGCCTGGCATTGGCACTGTGGGGAAACCAATCAAGCTCCTGGCCAATTACTTTGAAGTGGACATCCCTAAGATTGACGTCTATCACTACGAAGTGGATATCAAGCCAGATAAGTGTCCTCGCAGAGTCAACCGGGAAGTGGTGGAATACATGGTCCAGCATTTCAAGCCTCAGATATTTGGTGACCGCAAGCCCGTGTATGATGGAAAGAAGAACATTTACACTGTCACAGCACTGCCCATTGGCAATGAACGGGTTGACTTTGAGGTGACAATCCCTGGGGAAGGGAAGGATCGAATCTTCAAGGTCTCCATCAAGTGGCTGGCCATTGTGAGCTGGCGCATGCTGCATGAAGCCTTGGTCAGTGGCCAGATCCCTGTTCCCCTGGAGTCTGTACAAGCCCTGGATGTAGCCATGAGGCACCTGGCATCCATGAGGTACACCCCTGTGGGCCGCTCCTTCTTCTCACCGCCTGAGGGCTACTACCACCCGCTGGGGGGTGGGCGCGAGGTCTGGTTCGGCTTTCACCAGTCTGTGCGCCCTGCCATGTGGAAGATGATGCTCAACATTGATGTCTCAGCCACTGCCTTCTACAAGGCACAGCCAGTGATTGAGTTCATGTGTGAGGTGCTCGACATCAGGAACATAGATGAGCAGCCCAAAGCCCTCACGGACTCTCAGCGTGTGCGCTTCACCAAGGAGATCAAGGGCCTGAAGGTGGAAGTGACCCACTGTGGACAGATGAAGAGGAAATACCGCGTGTGTAATGTTACCCGCCGCCCTGCCAGCCATCAGACGTTTCCTCTGCAGCTGGAGAGTGGACAGACTGTGGAGTGCACAGTGGCCCAGTATTTCAAGCAGAAATATAACCTGCAGCTCAAGTATCCCCACCTGCCTTGCCTGCAAGTTGGCCAGGAACAAAAGCATACCTACCTGCCCCTAGAGGTCTGTAACATTGTGGCTGGGCAGCGCTGCATTAAGAAGCTGACTGACAACCAGACTTCAACCATGATAAAGGCTACAGCTAGATCGGCCCCAGACAGACAAGAGGAGATTAGCCGCCTGATGAAGAATGCCAGCTACAACCTAGATCCGTACATCCAGGAATTTGGGATCAAGGTGAAGGATGACATGACGGAGGTGACGGGACGAGTGCTGCCGGCGCCCATCTTGCAGTATGGCGGCCGGAACCGGGCCATTGCCACACCCAATCAGGGTGTCTGGGACATGCGGGGGAAACAGTTCTACAATGGCATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGAAGAAGTGCTCAAGAACTTCACGGACCAGCTGCGGAAGATTTCCAAGGACGCAGGGATGCCCATCCAGGGCCAGCCTTGCTTCTGCAAATACGCACAGGGGGCAGACAGTGTGGAGCCCATGTTCCGGCATCTCAAGAACACCTACTCAGGGCTGCAGCTCATTATCGTCATCCTGCCCGGGAAGACGCCAGTGTATGCTGAAGTGAAACGTGTTGGAGATACTCTGTTGGGAATGGCTACACAGTGTGTGCAAGTGAAGAACGTGGTCAAGACCTCGCCTCAGACTCTGTCTAACCTTTGCCTGAAGATCAATGTCAAACTTGGTGGCATTAACAACATCCTAGTCCCACACCAGCGCTCTGCAGTCTTTCAACAACCAGTGATATTCCTGGGAGCAGATGTTACACACCCACCAGCAGGGGATGGGAAAAAACCCTCTATCACAGCAGTGGTAGGCAGCATGGATGCCCACCCCAGCCGTTACTGTGCTACTGTGCGGGTACAGCGACCACGGCAGGAGATCATTGAAGACTTATCCTACATGGTACGTGAGCTGCTCATCCAGTTCTACAAGTCCACGCGCTTCAAGCCTACCCGCATCATCTTCTACCGAGATGGGGTTCCTGAAGGCCAGCTTCCCCAGATCCTCCACTATGAGCTGCTGGCCATTCGTGATGCCTGCATCAAACTGGAAAAGGACTACCAGCCCGGAATCACTTATATTGTGGTGCAGAAACGCCATCACACCCGCCTTTTTTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCTGGGACCACTGTGGACACCAACATCACCCACCCATTTGAGTTTGACTTCTATCTGTGCAGCCACGCAGGCATCCAGGGCACCAGCCGACCATCCCATTACTATGTCCTTTGGGATGACAACCGTTTCACAGCGGATGAGCTCCAGATCTTGACGTACCAGCTGTGCCACACTTACGTACGATGCACACGCTCCGTCTCAATTCCAGCACCTGCCTACTATGCCCGCTTGGTGGCTTTCCGGGCACGATACCACCTAGTGGACAAAGAGCATGACAGTGGAGAGGGGAGCCACATATCGGGGCAGAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGCCGTGCAGGTTCACCAGGATACTCTGCGCACCATGTACTTCGCTTGAAGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAAGAGCTGTGCCGCCCAAATCCAGAGGAAGCAGGGAGGAGGGAGGTGGGGTAGGGAGGAATGCAGAAGGCCCTGTTTCCTTCTGCAGAGGGGGCAAAAGCGGGGGGAACAGGGCCAGTAAGCCAGACCACCAGCCAGAAATCTCTGATATTCACCTCATGCCCTCAACCCCTCACCCCATCTTGTCACATCTGGCCCTGAACCCACTGGACCAAGACAGGCAGCAGCGGTGCCCACCATACACACAGGTGTCTCATGTGACTCACAGTGCTAAAGACTCACGCCTGACAGCTTGGTAAGGTCGGCTCTGCAGCCCTGCGGACAAAAGCTGGTAGGTTTGGGTTTGATACTTTAGATGGAAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGGAGGGAAGGATTTTTTAGGAGCCTTAATCAGAAAAGGTCTAGATTTGTTTAAGAAGAAAAACGAAATCAGATGCAGATCAATATTTTAGGATACTAGATGTTTTAATGGGTTGAGAATCCAGCCTGTAGGAAGATTTTTAATGCTAATGATTTTGGTTGCCCCCTCCCCCAGCTGCCACTCCCCTTTCCCTTATTCCTCTTTCTCCACCTTTTCTACCCCACCTTACACCTGACAGACATCCAGCCCCTAGTAAGACTTAAGGCACTATGGCACTTAGCTCTGAAGTGACACGACCCTGTCTTCCTTCCGCCTGCTGGTGGGTAACCAGTGCCTTCCCTGTAATGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTTGGGGGGTGGGGGCGGGGTGGGGGTGGGAGAGGAGGTAGGTTGGGATGAAATACCCTGTACCCAACAGGCCTCCAGCCAGAGCGCCAGCTATTTTGCATTAGAAGGAATTGACTTCCATATTCATTGAGCTTTTAAAAAGATCACGACCTCAAGATGGTTAAAATCCATTGACATTTGCACTTTCAGACATGACAAGTCTAGGAGCTGCTGAGATGACTGGCCCCTGGCCTTTCCACTTATGTCTCCTTTCTTCTTGTCCCCGCTTTCTTCCCACCTGCCTGGGTCTGGAGTTAACTTTCATAGCATTTCCCACTCTTGGCTTCTTTTCCCTGATGGTCAAGCCTCTTTATGTTTCAATATTTTTTAACTGGGGTGACTTACAACAGATGATCTTTAGGTCTAAAATAAGGGGGAAAAAAAGCAAAAACTAAACATTATTTTTATACTATAACCTGAGTCCATTGCCAAAATCTGGAACTAAATCCCTCCCATGCCCAGTGAGTTTACATCCCAGAAACATTGAGCCATCAAAGGAACTATGTACCTGACTTCTTTGGCCTGCTTTGGCTTGGCTCTGTAGGGTGTGGTTATCTCCACACGTGGGGCTCAGGCTCCACCCTTTGTGCAAATAATACCTTTCTCTTGCTGCAGGCACCTCTGCTGCACTGCCCTGCACTCTTCCTGCAAGTGCATCTCCTCCTCTGGACTATCCTCTGATGCTTGGCTTATCCCAGATTTCAGCGTGTCCTGTGGATAGGCTGGGGGATTTTGCTGCTCCCTATTGCTTCTGTTTACACAAATGACTTTTTCCTGATTTCCCACTAGGGCATGTGAGTGGATGGCATGGGCTTTTTTTTTCTCGTTTTTTCCTGTCTTCCTGGGTAGAGATGGGATTTGGCTGTCTTGCAGAACTGGAAAAGTAGGGGGTTCTAGCTTGGGGCCTGTTGGCCTTGAAGCAAGGCTTCCTCTTTCCTCGACTGTTCCTTTTTTCCTGTCCCACTGCTTGGGATGAGGAGTTGCAGCTTCAGTGTGGAAATTCCTCTTTTTGAGGAGCCCGGGCTTGGGTTTACCCCAATCTGGTGATGAAGCCATGACTCTTCAGACCTAGCTCAGGCTCAAGGCCAGCCAGCAGAAGGCTGGTCTGAATATGGGCCTATGCAGTAGAGCTACCATTTCCCCTCCCCAGCAGCGCTTGTACAGACCCAGATTTGCTATGCAAAACAGTCTATCCCAGGTTCTGTTCTGGTTGGCTACTTTGTTCAGCAACTTCACAAAACGTAGCACAAACATTATGGAGAAGGCATCAGGACTGTTGAGTAACTCTTTCTTTACTTCTTTCCTACTGGCAACAGTATGGGGTGCCCTGTGGGCACAGCCCAGCTGAAAACAGAATGGAGGGCTCTGGGAGGAGGCAGCTCACTGGAGAGCCTACATTCCTTACACAAGTGCCTAAGAGTGATGCCAACACTCCCATCTGCCCTGTCCATCGCCTTCATATATTGTCTACTTCGTGTTTAGTCACCCTTTAGGGAGGGGAGCTCTCTTGGGACAGTGGGCTCTGAGGGTTCTCTTCTCGGGTGCGTTTTGGGGCTGGGATCAGGGCAGTATTCCTGGAAGGTCCAGTCATTCACCAGCATTTGCAAATGTCCATTGAGAGCTGGTGGTAGCCACCTACTCTCAGCAACAAGTTTGTGTTCTCTCCTTTTTCTCTCTTTGCCTCACTCTCTCCAGTTGGGTCTTGAGCTGAGGCTTGGCATTTTTTAGCCCTTAGGCATTTACATGCCATTTAATAAATAAAAGAAACAGCTTGGGCAATGGCAAGAACATGACATCTTGCTGTGATTTTCTTTTTTTCTTTCTTTTTATCTTTGAGACTTGAAAAACACCCTTAACCTTGAGGATTCTTCTTCTTCGAAAGGTGGTGCATGCAGATTGAGAAGTGGTGTTGGCAACAAGCTTGGCTTTCTTTGATTTGGTTAAAGTGGTGCTTCTTACTTAGGCTCAGAGGAAGTGCTGGGGAGACCCCAGCCTCATCCTCTTAGACAAGTCTCCTGGTCCCTTTGTTCTACTCTTTTGCCTTCCTTTTCCTACTCTCTCTTTCCCTGGCCTCGTTTTATTTTTTTCTGTTCATTCAGCTTGCTTGCTGGCCTGCCTATCTGCCTATGTGATGATGAATTCTCTGCATGGCTACAATGATCCCACTGTTAGCTGGCAAGGTCAGGCTTAGCTCTTTGGCTGCAGAAGACCAAGAATCTGCTTCCCAAGCCTAGTGATGTCCTTCCTGGGTTGGACCGCCCTCAAACTTATGTGAAGGTGTAGCAGAAGGCCTGCCCATCTGGCATGAAATCAGGAAGGCTTCTGGCAACTTCCACATCTGTCCACTCTTTGGAGTCGGCTTCTCTTGTTGCTTTTTCTAGATCTGGTTTCATTTCTCTCTACCTGGGGCTTCCCTTTTCTGAGGATGTCCTAGCATTGACCTTTTTGGCTATCCAGGGTTGAAGGGTTAGGGGATAGACATGGGGGAAGGAGGGATGGGAAGAGAATGGAGAGAATTTGGCTAAAACATGGGAAAGGAGAGAGCCCTGCTCACTGATCACTTTTCCAGTCCAGCCTGACTCATTGGGGCCGAGGTGCTACGGCTGGCCTCTGGGGATAAGCATGAGGCTGTTGTTGCTGGGAACTTAGGATTAAATTAATGTTGAAAAAGAAGGTAACTAAAAGTGTGAAACCTCCCTAAAAAGCTCCTGGTTCCCGTCTACTCAGTATCTCCTCTATAGCCTCCTCTTTGGCTAAGCAATGATGTTTTTTGGATAGTTTTCTTTTTCTTGTCCAGAATTCTGTAAATGAGGCCAGCAAGATGGGCAGCCAAGGGGACGCAGTGATTTCTCAGCTGACCCATAGGATATCTGCAAGGCTAGTGGGACAGTGTTTTAGACTTGGCATTATGTGTAACAAAGAAAGGTGAATGGTCCTTCCCCTTCAGGGTAGAAAGTCATTTCAAACTGACTAAGATGCAGTTTTGGAAACTACATCAGGGGGAAGTTATTTTTATTTATATTTGCTGGGCCACGGCCAATCCTGGATGGTAGCTGGGATGCCTTCCTTCTTAAAGTCTGATCATGGCAGGGTTATGCAGGGCACTCTTTCCTCTTTGGCCTTCTAAGCTGATCAGGGAGAAGGGATTCTCTGGTTTTCTCTTCTCTCCCATTTATTAGGACTTGCCTTCTCCCTGGGCAGGGAGAGAGGCTAGGTTGGTGCTCTCCCCTTACTCTACTCCTACTGACTTAGAACCTCTGGCTGCTGTTCGGGAGCCCAAGAAAGGTGGTGGAGGCAATGGGCTCAAAACAACAACAACAAAACCAGAAAAAGGTGAGGAAAGGCAGATTTCCTTCTTTAACAAGGAAAATAGGAAACCCTCCAAGGATTGTGCAAATAAAGACAATGTGTCAAATGCACTGACTCCCCTGGTGTAGTAGCAATAAGGAAAAATGAAATGACTTTCCTGTGCACATAGTCCAACCTGATTGGTGTGTGATGTTGCACTTAGCAGCCATCTGGTGGGCATGTGTGACTACTCTGGGTTTCACTTTAGTTTCTAAACTTTTTATCCCTCTCAAGTCCAGCATGGATGGGGAAATGTCCCTGGAGCCCCACAGCTGTGTACTTGTTTGCATTTGTTTCCCTATGAGACTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTAAAATTATCCCAGCAGCTGTAATGTACAGTTTCTTCTGAAGCAAGCAACAGCAGCAGCACAATTCTGTGTTTTATAAAGACAACAGTGGCTTCTATTTCTAAAGTGCGGTCTCTCTCTCTCTTTTTTTTTCTTAGCAAAGCAAACCATTGGAATTAATTATATTCTGGTAGATTTTACATTAGAATAATAGATTGTGAGAAGAGCAGAATCATCACTTTCTAAAGGAGTAAAGTGGGTAAAACAAATTCCAGAGTGTTGAAACTGCCGATCATATGTAGTCATTTCACAGGGTTTCCATTTATTCTTCATTCACCAAACATATAAAGCACTGTGTCTAGCAGTTTTGTTGGGGAGTAAGCAGGCATAATTCAAAAATGAGGAAAACAGTGTTTGTCTCCTTAAGGAGCTTAAAAAGTTTGGTTGGGGATATGAGTAGCGAAATGGTTCTTTGGTACTATTTAGAGAGATTATAAGGATTGGGAAGAAGGCTATAATGCTGCAGCAATGAAGATAGAAAGGAAAGAGCAAATAGAAGAGATACTCAGGAGGTAAAATTAATAGAACTCAATGGATGGTGGAATGAGAAGAACCAAGTAGAGGCTACCATCCACTTGGCTTGAGCAAGTGAGTATGTTGGGACATCCTTCCTCTAAGCCAAGATTGGGGGAAGGGAGACCGTAGAAGGAAGGTGGTGAATTTTGTGAAGAAAGACCATTAGGCTTTTATAGACTGAGTTTTGAGGTTCCCAGGTTTCCAGTAAACATTTATATTTTGGTGCTCAGGGAAGACTCCAAAACTGCAGTTATAGATATGAGATTCATAATCATAGAGATGGTAGTTAAAGCCATAGGAATGAACAGGATGGCTTAGGAAAGAGTAGGGCAAGAGAAACCTAGTGTACAACTCTAGGAAACGAGATCAGGAAATGGAACCTAAGATGACTGTCACATCACTCATAGATAGCTTATATGGTTTTGATTGATTTAATGGGGTGGGAGAATAGTGAGGAGAGTGGAATAGGATTCAACAGCGACATGATTAACAACAGGAAAACTACTGTGGTGAAGGGAGGGTATTATTTTCTACTTATTTTACCATCCTTCACTCCATCTTCTCTGGGATCTTGTAACTATATGGTCATTCTCCGATTTTTCTTGAAAATGAGCATTGGAAAACCTAACTTAAATCAGGCTAAGACTGAGACTTCCAAGTCGTTCACAGTCACCACCACCACTACATCCACCTCCAGCTTCCTCCTATCCTCAGGAGATACTTGTGAAACAATAAAATAAACAAACCTAATTTTGTTCCTATCCAGTGTCCTAGATCGTATTCCAGTGCACTTGGTAGCACTTAGCAGCTTGCTCTATTTTCTCCTATGACTTGTTTTTCCCAGAGCCTGCGAACTCCTAGCCGCAGAAACTACCACTCATTTTTCTCTCAGGGCCATCCATAGTGTATATCAGGAGGGGTCAGTATTTATGACTAGGATTGAAATGAGCTAGAAATCTGTGGTTCTTGAGTACGGAGGGGAAACTCAAGAAGTGCTACTGAGTCTGCAGGATGGACTCAGCATTCCTGAATCTTCAGGTAAGCAGAAACTTTGAACCAGATCATCATCACCTTTTCTCACTCACTCCAGCCTTGAGGGTCTAAGATTTTGTGCCTTAAGTTCTTGGTGCACTTATCAAGCATGTAAGTTCAGCATACCTCCCTGGTACTCCTAGAGCATTGGTTATTTCTGTGTACTGGGAGAAGATGGCACAGGGAAGGATTCTGGCACAGTGCCCAGTGAGAAATTTCAGTGGCAGCTAGAATGTACAAAAGCGGGCCTCGCATTCCTCTGGAGGCCAAGTGTTGTGGACGTCAAATTGCAGTGCTAACCTGTGGCTACCCCTGCCAGATTCTCTTGGAAGCAAGCCAGCCAAAACCATGCTTCTCTGCAGCATGGAGTAGTGAGGTTGGTTGGAGTTGAAGAGCAAATTGGAACATGTAGGAAATTTTTCCCAGTTGAAACAAGACTTAAACTTAAGACCATTAATGAAGTAGAAAGTGTTTAGCAGAGCAAGTGGGAAGATGATCATTATACCACATTTTCACCATAAATTTCATTGCCATAAACGATTGATGTTAAAAAAAATTTCAGGATTTGGCTGATGGTTGCTACTCAGGTGTTGCTAGCACCGTGGATATCCCTTTTCAGGAGTGGTTGAGCAGCCTTTCCTCTGTCCTTTCAGTTGGCAGAATATACTGTAGCACTTTTTTGTCACTACAGTCAAGTGCCTTTAAGATAGAATGAGGTGGTATATTCGTTGGGTATCACTTGGCTTAACAGACCCCAGAATCATGGAGTAGGTTTGGCAGCTAAAGGAAAGGGTTTTATAGTGCAAAAAGAAGAATATTTTCAAGTTCTGAGTCTGGGGCATCCTCAGACTACTGGCTCTACTGCTTGAATGTGAAGTAGCTTTGAATTGGAAAATCAGCTCTGTTTTCAATCCTAGCTTTCAAGGTATTTATTCCTTTGGCTATAAGCTGAGGAAACCTCGCAGGCTCAGAAGGTGCACAGAGCATGGCAGAAGCACTCTTAAAGCAGCAGTGTCAAGAAGCTGGAAAAGTGGACTTGCTGAGGATGAGGTGCATTTCGAAGCTCTCCATTTAAGTACCATAACTACCTTCCCAGGATACCAGATCAAGACTTTTAGGCTACCGTGGCTTTCCCTGCAGGAACCCACTGTCCTCTTACTCTGGACCGAATCAGCTTCACCACTCTCCTCTTGGCAGTGTCTTTTGGGGACAAAAGAAATTTTGAGGAACCTTTCTAGGAACCTTCCTCACCTTCTATAGGCAAGGAACTTTCCTTATAAAAAAGGCAGGTTTGGGGGTTGTTGAATGGAGGTGAATTGGAAAAGGAATAGGAAGTGGGTACTTTGAAGTACTTGGTCAGGTGTTTTGTACAGTATCCTTTATAATTTGGTTGCATCTTCCGCAGCATTCAATGAAGTAATTTATCTGTTACCTTCAACTGCACGTAACAAAACCTGATTGGTTTAAATAAGGAAACTACCACATGACAAGAAATGCTGATTTATGTGGCTCTAAGGTTGGATAATTCAAGGGCTCAGTAATAATACCAACATAACAGATTCTTGCTCTCCTATCCTTTATGTTATCTTACCCTCATGCTTGTTCACCTCAGAATCCCAAGACTACTTGTATAACTCCAGGAAGGAAATGCTGACAGAACAAAGTCTAGCAGAAGAGGGACTAATTCTTCCCAGTGTTTCATTTTAAAGAAAGGAAATCCCTGGAAGCCCCAACAGATCTGGCTTAATGTCTCATTTGCTAGAAATGGGTCATCTTGCCATTATTCTGTCATTGGCAAAGCAAATGAGATCATCCATCATGAGTGGCTTAGATTAATTACAAGTTATCTTATGAATCATGTGAATTAAAAAGACAAGTTATGTTTGCTAGGCAAGAAGGGATAAGGACTGTTGGTTAGGCATCCAGCAGTGTGTTGTGTGTAGGTGATCTGTTTTTACAGAAGAGGAATGTGATGTTCAGAGAGGGTGACTGGCAAAAGCCTTCAGTGTCAGTTCTGACTGTCCCTAAAGCCAGTATGTTTTATATTGTGTTCTGCTGCAATACAGAGTAACTTACTTTGTGCTGTGTAAAAACTGCTTGTCTAGAAGAGATTCCAAGTGTCAAGCCCATCCAAGAGGAAAGGATGCTATCCAGTTCTTTCCTCATTCAGTGATTTTTTTTTTCCCTAACAACTTTCAGAGGGCACTGATTTCTTTGCCCCCAAGATTTCTGTACTATTTTATAGTTCTTCCTCTGAGAGCAGGCAGTACCACAAGGGATGAGGGCAGAGTTACCATTCTTGAAGCTCACTTATTTATCTCTTTGTCCACCTGCCCAACAAATATTTATGGGAGGCTGCTAGGTACCAGGCACTGGCACTGTGCTAGGCACTGGAGCTATAATTAGGATACACAAAAACCTGCACTATGCCCTTAAGAGGCTCATTTGGGAATAAGGTTATCCAGAACTAGGAAATGCATGTGGTTGGGAGAGCCTCATACAACTTGGCTTTTGGCAGAATCATTCAAACTTTTTTGCCTTCCTACATCCTGATATTACAGTTCACGAGCCTTTCCTATGAACTCACATGTGAGGTCCCTAGATAACAGTAGATGGGAAAGCATTATTGACATTTATTACATTGGACTGAATTAGAAGGTCCAGATCCTGTTACATCCATGTCAACAAAGAATACAGTGGCCCACCTCCAGCATTCATCACCATGTTTATTCCAGGAGACACCCAAGAAACCTGCAGTCATTGAGGGAGCCAGTTGTAGGGATTTGAGGGTGTGAAAGGCTGTTGCAAAAGTTGGTATTCATCCCTGTTAAATGTTGCTAAGGACTTGGATTGTGTATAGTTTAGGATCGAAAATAACTTTTAGGATACAGTGTTTCATCTAGTGACATCTGATACTGTAAAATTGAGGGAATTTTCAGAAAAAGGGCTAAGGATGAGAAGGAAGAAGTGAGGCAGAATTGGAGTCAGATGTGGGCTTGAATCCTATCCATTTACTGTTTGCTGTATAGTAGATGCATCTAATTAGTGCTTTGAAATAACTAATAAATACCTTCACTAACATTTAGGGAGGATTTTCTCAGTGCTTTATGCCCATTCCCTAACTTCACAACTGAGGACGCTGAAGCCCAGAGGCTCAAGTGACTGATCTGAAGCCCCATAGTGATTGGAAAAGTACTAAAGATACGATCAAAGTGAAAGTTGCTCAGTCCTGTCGGACTCTGCGACCCCATAGCCTATCCAGTCCGTGGAATTCTCCAGGCCAGACTACTGGAATGGGTAGCCTTTCCCTTCTCCAGGATATTTTTTTCCTTTTTCTCTTTGTCCCAGGGTTTTAAAAAAAAGTATTTTCATTATTAACATTCTAAACGTTGCTGATACTAGGGACAGGGAAAAATCATTAATCATTTCTCAGCCTGAATGAAATAGTTATCGTTTCTGTAAGGCAACAAACACTAATAGGCTACGCAATAGCAAACAAAACTTGCAGACTGGGAGAGGGTTTGTTAAGGAAATACTGTAATAGTATACAGGAATGCCTCACCATAGGTCCAGGAAAGGCTTCAGCGATTGGCGGGCACAGGGTGAGCCCTGTGGGGTGAGCGTGAGACAGGAGAGGGCTCCTGGTCAAGAAAATCCAAGTGTAATAGAGAACCGTTTTGCCCAGTGCCGGGTAAGCAGACCACTGTAGCTGTAGCATAACGATGAGGAAGAGTCTCGCTTAAAGGGAAAGGCAAGGACCTCCCTTTACGCCTCTAGGTTGGCCCCGGAATGGAGTTTGGACCTTAAGAGTGACCAGGCGTTATTAAAGAGTTTTTAACATGGAAATTATTCGATCTGACGTTTTTGTCAAGTCATCTTTTCCCAAGTTAGATTGTACGAGAAATATT EMBV3_33940 CACGTGGAGTTAGGAGTCAAAAAACAGTACCTTGTTCTTGGGGGGACTATCTCCCTCTGT Gene GeneID:525937|GDA:XM_002689647:11_cdna Constitutive 0 NULL GeneID:525937 8 GENE GDA NULL guanine deaminase EMBV3_34149 CGCTTGCTTGATGAGAGTGGGGGTGCTTCACCAACTCTTTTTACTGAAGATGCTTCTGCA Gene GeneID:532574|MYO5C:XM_002690963:339_cdna Constitutive 2 NULL GeneID:532574 10 GENE MYO5C NULL myosin VC EMBV3_05931 AGTGACAGTTGATCACCATCTACTCTATCTAATAATCTGCCTTGAGAATAACTCACACAC Gene BVV0102_249184 + 0 NULL GK000019.2:48682321-48692780 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100556 1 XLOC_060798 NonCoding TCONS_00100556 XLOC_060798 NonCoding NonCoding - 19:48684230-48684933 - TSS74932 703 1 TCONS_00100556_1 88 0.507823613086771 1 0 0 0 0 0 0 0 0 0 0 0.000105349695414713 9.76893108386228e-06 0.000498460248801149 0 0 0 0.000225418847881727 0.000661257830758561 3.56911831812188e-05 0 0 0 0.000105557097057586 0.000156598287305585 0.000596183257754411 0 1.00220042665796e-05 0 0.000368904324263242 0.000276222441094486 0 0 noncoding 0 0 0 0 ATGGTCAGGGAAGTGTTTACAGACAAGCTGATGTTTAAGTGGACTAGATAAGGAGGTGAGGGAGTGAGCCCACCTAGTTTCTGGAGGAATGATCCTTCCAGGCAGAGGAACCAGCAAGTATAAAGACCTTGAAGAGGACAATGCTGGCTTGTTAGAGGAACAGTTACAAGACCAGCATGTTTGGAGTACTGTGAGCAAAAAGGAGGAATTATTAGGAGATAAGGTCAGGGAGGGGAACAAGGCGTTGCAGGGAGCACCAGATAACCAGGACCTTTTAGGCTGTTGTGAAGATTTCATTTTTCTTCTGCCTGAGATGGAAACTGAGAGTTTTGAGCAGGGGAATGGTAAGATCTGACCTACACTGTTAATAATTCAGTGCAATTTGTGGAAGAGTACAGTTCTTTATGTTTTAGTTTTATCACATCTTTATGTAATCAGCTCTTAGTTTCTTTAAGCTGGCAGAGAGAAAAGAGATGCTTCTAAAACAAGTGTAATCTAGCAGTTACTTATTTTGGCTTTAGAAGAATGTGTTGAAATTCTTGGGTTTTGTACAGATTCTTGCTAAATAATCAGATTTATAGTGTGTGAGTTATTCTCAAGGCAGATTATTAGATAGAGTAGATGGTGATCAACTGTCACTAGAAATCTTACTCCTACTCCAAAAACACAATGTTAATGATAATGAAAAAGTAACATTTTATAA TCONS_00094252 TCONS_00094253 . 3' 1131 TCONS_00094252 TCONS_00094253 . 3' 1833 EMBV3_27895 GGTTAACTTTAGACTAGGAATTGGTGTTGGGGTGGGGGGTGCAAGAATCTTTATTTTATT Gene GeneID:614795|FKBP1A:NM_001035456:1279_cdna Constitutive 2 NULL GeneID:614795 13 GENE FKBP1A FKBP1B FK506 binding protein 1A, 12kDa EMBV3_11561 AGAACACTGTCCCATCTGCGCCGGGTTCGCGTGGAGAAGCTCCAGGATGTGATGAAAAAG Gene GeneID:613817|VPS37C:XM_002699240:207_cdna Constitutive 0 NULL GeneID:613817 29 GENE VPS37C NULL vacuolar protein sorting 37 homolog C (S. cerevisiae) EMBV3_03886 TGAGCTGAGCGGACCTGGAGGAGGCAGCAGAGGATGGAGTTCAGTGGAGGAGGACTGCTT Variant GeneID:523162|TMEM85:NM_001034547:67_cdna 179^608 2 EMBV3_36738 GeneID:523162 10 GENE TMEM85 MGC127546 transmembrane protein 85 EMBV3_03773 GAGCTGGATAAAGGTAAGTGCCTGTTCCTATATTCCTCTTTGCTTTCTGCCATTAGTGTG Gene GeneID:100335828|LOC100335828:XM_002684750:220_cdna Constitutive 0 NULL GeneID:100335828 1 GENE LOC100335828 NULL cell surface glycoprotein CD200 receptor 1-like EMBV3_36101 CATTAAGTACCTTCACAATGCTGTATGGCCGCCACTGCTCTCTCGGTGGAGAACATCTCA Gene BVV0102_051606 + 0 NULL GK000011.2:103192050-103251572 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034237 1 XLOC_020470 NonCoding TCONS_00034237 XLOC_020470 NonCoding NonCoding - 11:103203341-103204061 - TSS25236 720 1 TCONS_00034237_1 70 0.522222222222222 1 0 0 0 4.28425954838259e-06 0 0 0 0 0 0.000263004828283036 0 0 0 0 0 0 0 0 0 0 9.98810020933794e-06 0 0 0 0 0.000134720275734837 0 2.44131497483753e-05 0 0 0 XR_227194.1 LOC101907468 PREDICTED: Bos taurus uncharacterized LOC101907468 (LOC101907468), 2e-172 609 100.00 0.466666666666667 0 noncoding 0 0 0 0 -0.0104540234210991 0.922101411283316 -0.0130292203138056 0.816861979652043 GCGCTTTGGGCACAGGGCTCCCTTTCGGGGGGTGAGATGTTCTCCACCGAGAGAGCAGTGGCGGCCATACAGCATTGTGAAGGTACTTAATGCTCATGAACTGTACGACTCAAAATGATGACGGCTGAAATACTATTATATTTGAATATTCTAAATCATCTAATATAAGAGTGTAGAGAGGAAAAAAAAGAAGCCCCAAGACAAAAAGATGCGAAGAGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCGGGAGGAGAAGAGGACGACAGAGGATGAGATGCTTGGATGGCATCACCGACTCAGTGAACAAGAGTTTGGGTAAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCCTGCTGCAGTCCACGGGGTCGCAAAGAGTCGGACACGACTGAGCCACTGAACTGAACTGAAGACAAAAAGCCCCATCACGGGGGAGCGGGGAAGAAAAGTCCTGTTTGGGAAGCAGGTGGAAGGTGTGGGCTGGGAGCTGGCCCCGGGGGCGGGTCCCGGGGAGGACCTGAGCGGCCTCCTCGTCTCATTCCGGAGCTGCTAATGGAACCTGTGCTGGTGTCGGCGCCGCTCTGGAGCCGCCAGTAGGGGGAGCGCTCGAGCTGAAGGCGGACGCAGGCTCTGGGGCTGCCTTGACCTTTCTGCCCCTGCACCTGGCTCCTGTCACCTCTGATTCCGGATGGAGCTGAC TCONS_00029266 . 3' 1274 TCONS_00029266 . 3' 1993 EMBV3_12273 GCAGGAATTAACCGACGCCACGGGGTCATCACAGGACAAGATGGAATTGAGGACTATTTT Gene GeneID:513309|GFM1:XM_002684956:221_cdna UTR3_Alt 2 NULL GeneID:513309 1 GENE GFM1 NULL G elongation factor, mitochondrial 1 EMBV3_03010 CCGTGTGGGAAGCATCGTGGCCCCATTGTGCATTTATCTCTCCAGCGTTTGGATCTTCAT Gene GeneID:614380|SLC22A16:NM_001076324:65_cdna Constitutive 0 NULL GeneID:614380 9 GENE SLC22A16 MGC139651 solute carrier family 22 (organic cation/carnitine transporter), member 16 EMBV3_28083 AGACAGCGAGGGCGGCCGGGCCGGCCCCAGGGGGAAAAGGAAGCGGTATATTTGACGAAT Variant GeneID:618512|HN1L:NM_001081546:309_cdna 70^209 3 EMBV3_11507 GeneID:618512 25 GENE HN1L NULL hematological and neurological expressed 1-like EMBV3_02330 TAACCGGCTGGGGGATGGTCAATGACCAAGGGCGATTCTGGGGGACCCCTCGTCTGCAAA Variant GeneID:529047|LOC529047:XM_002692643:141_cdna 647^813 1 EMBV3_34474 GeneID:529047 14 GENE LOC529047 NULL testicular serine protease-like EMBV3_31654 CTCCTGTACGCCCACACCCTCTGTCTCCCATATTCTCACTAATCACTCCAACACACAGAT Gene BVT0101_017514 + 0 NULL GK000017.2:72288390-72292769 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078223 TCONS_00076282 TCONS_00078218 TCONS_00078221 TCONS_00078224 TCONS_00078219 TCONS_00076284 TCONS_00078217 TCONS_00078211 TCONS_00076281 TCONS_00078220 TCONS_00078216 TCONS_00078215 TCONS_00078214 TCONS_00078222 TCONS_00078212 TCONS_00078213 2 XLOC_047250 XLOC_046772 Coding TCONS_00078211 XLOC_047250 Coding Coding EIF4ENIF1 17:72288299-72300666 j TSS58248 6365 1 TCONS_00078211_4 380 0.0937941869599372 8 0.48592916060165 0.00394272762462474 0.0034274812904327 0.00264451825548232 0.00225009476152278 0.00374212570564285 0.00135801573506556 0.00269799904509383 0.00310439970324699 1.09864890279668e-22 5.50574760689791e-07 1.31442724952306e-109 1.30847166509687e-09 4.77868922617744e-22 0.000861330531535456 0.000112756614424185 0.00150168804455687 1.05067857815638e-13 7.61236791360785e-07 0.00362687375113412 0.00168929030128337 0.000941273761950477 1.769717757083e-24 0.000458754503192172 0.00023525064213918 0.00169613481182019 0 0.00223052382935725 2.07819384877365e-07 4.89252661028798e-29 2.25531618229857e-18 XM_866852.6 EIF4ENIF1 PREDICTED: Bos taurus eukaryotic translation initiation factor 4E nuclear import factor 1 (EIF4ENIF1), transcript variant X2, mRNA. 0.0 3716 100.00 0.323487824037706 NM_019843.3 EIF4ENIF1 Homo sapiens eukaryotic translation initiation factor 4E nuclear import factor 1 (EIF4ENIF1), transcript variant 1, mRNA. 0.0 1813 90.05 0.210997643362137 TCONS_00078211_4 sp|Q9NRA8|4ET_HUMAN 4ET_HUMAN Eukaryotic translation initiation factor 4E transporter; 0.0 704 94.21 0.997368421052632 1 coding 0 0 0 0 -0.488634124968884 0.0446062898476989 -0.145169539370496 0.080137062900083 GTGTTAGCAAAAGTGTTGTGCAGAATCTGTGTTCCTGTACCCTCGACCACTCTATGCTGCTGGCTGTTCTGACCCCTGCCAATTATATTGTTTCACGTCAGGACCACAGCAGCTTCTCGGAGATCCATTCCAAGGCATGCGCAAGCCCATGAGCCCAGTCACGGCCCAGATGAGCCAGCTGGAATTGCAACAGGCAGCTTTGGAGGGGCTGGCCGTGCCACATGACCTCGCGCTGCAGGCAGCAAACTTCTACCAGCCTGGTTTTGGCAAACCGCAGGTGGACAGAACCAGAGATGGATTCAGAAACAGGCAACAGCGAGTGACCAAGTCACCAGCACCCGTGCACCGAGGGAATTCCTCTTCCCCTGCCCCAGCCGCCTCCATCACAAGCATGCTTTCTCCTTCCTTCACTCCTACCTCAGTGATTCGTAAGATGTATGAGAGCAAAGAGAAAAGCAAGGAGGAACCAACCTCTGGAAAAGCAGCTCTTGGTGACGGTAAAGAGGACACCCAGAAGCCCAGTGAAGAGAACCTCCTGTCATCCAGCTCTGTGCCCACTGCTGATCGGGACTCTTCTCCCACCACAAATCCCAAATTGTCAACCCTGCAGCGGTTTTCCTGTTCCACCCCACTGTCCCAGACCAACCGTTACACCAAAGAACAAGATTATCGACCTAAAGCAACGGGGAGGAAGACACCCACCCTGGCATCCCCCGTTCCAGGAACACCTTTTCTCCGCCCTGTCCACCAAGTCCCCCTGGTCCCCCACGTCCCCATCGTTCGGCCCGCTCACCAGCTTCACCCAGGGTTGGTCCAAAGGATGCTGGCCCAGGGAGTACATCCACAGCATCTTCCAAGTTTGCTCCAAGCTGGTGTGCTTCCCCCTGGGATGGACCTGACCCATTTACAGGGACTGTCTGGCCCAATCCTGAGTCAACCCTTTTACCCTCTACCTGCCACTAGTCACCCTCTCCTAAACCCTCGTCCTGGGACACCTCTGCATCTGGCAATGATGCAGCAGCAGCTACAGCGCTCAGTTCTTCATCCTCCAGGCTCTGGTTCCCAGGCAGCTGCTGTCAGCGTTCAGACGACTCCTCAGAATGTGCCCAGCCGGTCAGGCCTGCCGCATGTGCACTCCCAGCTCGAGCACCGCCCCAGCCAGAGGAGCAGCTCCCCTGTGGGCCTCGCCAAATGGTTTGGCTCAGATGTGCTACAGCAGCCCCTGCCCTCCATGCCCACCAAAGTCATCAGTGTAGATGAACTGGAGTACCGACAGTGAGCAGGGCAGGCGGGGCTCCCGCGCTCACCAAAGCCTGGACCTGCGGCGGCACCTGCTCAGGACTCTGCTTCCTCATCTCACGTCGGTTTGCAGCTTTTACTTTGTAGCATTCTTGTGTGAAGCTGTCTAGGGCACCCAGGCATCTGGTGTGGTCATTCTTGTGTGAAGCTGTCTAGGGGCACCCAGGCATCTGGTGTGGTCATTCTTGTGTGAAGCTGTCTAGGGCACCCAGGCTTCTGGTGTGGTCTGCGTTATGATGGAAGGAACTTAACCAGTCAGTGGAGTCTACATGGTTTGAATACAGGATGCAGTATTGTCAGTCCTAGAAAGTCTTTTTTTGTAAGATATGTGAATGAAGTGTTGGTGTCTTCACCAAGAGGTGGCACCTTAAGGGTTCTGAGGAAATAAATGTATAGACCCTTATGTACAGACCTGTGTATAAACAACTTTTGTACATACATATAGGATAGCTTTTTTGAAATTATACAGCTGTACATAAAAGTAGCTGGTGTTAGGTAAGCCTGTGTCAACATTTTGGATTTTTTTTCACTTGTACAGTTGGGGATTTTTCTTTTGGTTGATTAAAGTTGCATATGCTAAGTGTGTGAATGAAGTGAATGCCACTGCTGTGTTTTCTTCTTCCTGAATCCCTGCCTCTTCAGTAGGTTCTTGAGGGAAATTACCTTGAGTTTTTTCTGTAGGACTCATGGACCTGAACTCTGACTGGGAGGAGGAAGCCATGGCCCTCTTTCTTGAGCCTAATGACTCCAATGGGTGAGTTTAGACTGAGCTGACCCTATAGGTAGTCTTATGGCTAATATCAGATGATAATGTGTAATTTCTAAAATTAAACCCAACTAGAGAAAATAATTTATTGGGTAATCAGGTATATGGTCCTTTGTCACGTTTACTGGGGCAAAAGTCAACAGTTGGCTTCCTGGGTCTCCAAGTCAGAGTCCCCAATAGGGAAAAATGGAGCCTTAGTATTCTGATTCATTCCAGAATTTTTTCCATATAGAACTTCCCTCAAGACTCTGGTGCCTGTGTTAACTTCTTCTGTGTTCTTACTTCTCCGTTCCGTTATTCTGTGTACCGTAACTACATGCACAACACTGGGGAAAAGGATTCTACCAGAATAACTATGGCCTTGAGTCCCCTTTCCTGACTGAAGGTTTTTTATTCCTCCCAATCTGAGGTGACAAATCTCAAGCTCCTCGACTTAACTCAGCCGATTTCTCAGTTCTTATCCATTTAGGGCCCTCAACTCTAGTTTGACTTCATAGTAGAGGCTCAAATAATGAGACCATTCTGGTTCGGCACAAGTGAAGTTAGCAAGATGACTGGATTTTGACTGAAAGGTTAAAAAAACAGCCTAAGGGTTAGGGGTGCAGCCTATAAACCTGGAGCTGCCCACCCTGCCCTATACTTCCAAGAACAAATAGCAAGTCGCTTTTCAACAAAACCTGGCTTTGTGGATTGAGCATGAGGTCTGCCTTTTCATAGTACTTCAGCTTCACCCCTCCCTCCCTGCAGTGGGACCTGAGTGAGTCAACTTCAGAAATAAGCCCTGTTTAGAATTCTCACAAATGCTTTGTTTCATAAACAAAAAATCTGGAAAACAGTCTCAAGCAACAGTGGCAAAACAGAAACCTGGATCAAATTCCATCTAGTGTGTCCTTTCACTTCCTTTCATATTGAACCAACAGTCCTAGGTGTAAAGTGGGGAGGGTTGGTTTGAAGCTGCTAGTGAGGAATTCCTTTTTAGGCTAGAAGCTAATACGACAGACATGAACAAATGTAGGCACCAAGCAAAGGGCAAAGCCAGTAGCTGGTGAGATGGGGGTCAGAAGAAAATAAAGGAATGCTGCTAAGAAAAGCACAGCAGAAGCTAAATGCATAGATCTTAAAGCTATTTTGGTGAATGGAAGTAGAGGCAAAAAAGGAAGTGAATACAGTCTTCAGAAACTAAGAGCCAGCTATGGAGTAAGGAGAGCATGATGACATGATGTCTCAGCTAATAAGCCCTCTTACAGGGAGCAACTCTGGGGAGTCTAGCAGGCATGAGACAAGCTTAGAAGCAATCAAAGCTGGAAGGATGTGCAAAGCCTCCTCAAAGTAAAACAGCAGAGGGCCACAGAGAATCTCGTGGAAGTTGAGGGGTCAGGTAGGAAAGAACATTGCCTCCACCCCTAAGAAAGCAGTTGAGCAACCAGTACTTTGAAAATTAGTAATAATGAGAAGTAGGGGGGAAAATGGGAAAGTACAGGAACATCCGTGGTGGTCCACTGGTTAAAACTCCACACTCCCAGTGCAGGGGCCCTAGGTTCAATTCCTTGTCAGGCAATTAAGATCCTGTGTGCTATGAGGCACAACGAAAAAAAATAAAGCTAATTTTTTTTTTTTTTTTTAATGGGAAAATACAGCCAGGTCTTCTTATAGGAGATTATAAGACAGTCTCTTATAAGGTAGAAAGAAAGTCAGGTCCACTAGCCTATAAATGAAAGGGATAAACTCCAAGAATGAAGATAACATAACTGGAGTAAACAGACTCTTCAATATTCTACTCCCTTTACTAACAGCTGGTTCAAGAATGGGTATGAGACACTAAGAGGAATTGGCTGTGCAGCTTCTGGGAAATGGCTTCACCAAAAGTTAAGACTCAGCCCTCTTAGGCATCCTCTAGATACTGGTATAAAGCCCAAGGCTATAAAGATATTCTTTGACTGTGAAGGGCGCCATTTGCCCAGCAAAGCAGTGAACAGGATGGCATCATGGAAAGAATTTGGATCTTCAGTGACCCACCAGCTAGCCCATCTGAGCTCCAGACAACTTATGTGAGAGACCAAGTTTTCTTCCTTTCAGCCAGTTAAGTTATTGTCCGCTATTAAACACAGCTTAATACTTTTGGCCACCTGATGACAAGAACCGACTCACTGGAAAAGACCCTGATGCTGCGGAAGATTGAAGGTGGGAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGCATCACCAACGCAATGGACATGAGTTTTAGTAGGCTCCAGGAGTTGGTGATGGACAAGGAAGCCTGGCATGCTACAGTCCATGGAGTTGCAAGGAGTCAGACACAACTGAGCTGAACTGAACTGAAACACAGCTAAAGGCATTTGAAAAGAAAAATGGAAATTCAAGCTATGTTGTGACAGTCAAACAACCCTAGTCGTGGAGTTCAACCCTAGTCGTGGAGTTCAGGAAGAGAAAGCTTTGCCCTGTAGGAATAACGCTCCTTGGTGGCCCCACCCCAGGCAGCATTCCAAACACAAAACTGTACCTCTCCCAGAACTCCCAAGTCTGAGCTCAGAAAGGAGGTAGGGTAATGCTCTCCTCAAACACCAGGGGGCCACTGATGGGGGAAGGGGAAGGTGTGGAAGGATGGAAGCAAAGCCCATTCAAAGCATATCCTGAAGCCTTGGAATGAACCCAGATTTCAACATCTTTCTCAACATTCTGGCATTTCATTGCCCAATGAAAGTGAATTTGAGGATTCCTCAAAACCCAATATAAGCTCTGCCTGGAAAGTAAACCTTGCTGGAAATCCCATATCTCAGAAAGCCAGTGTCTCTGAAAAGCCAGAGTAGACTCTAAATTATGGCCTCTATCATGAATGTACCAGTGATATCAAGATCTACACCCTCCAAAGTCACTAGGATACCAGGCCTGAGAGGCTTATCTCCTGGGTCTGGGGACAGTGTTAAGCCCAAGCTCTAGGAAGATACGAGAGGGAAACAACTGTCACTAAGATAACAAGAGAAACAACTCCTGGAAAAGGCCGAGTGTGTAGATAATCCCACATCCTCACTGCTCACAGCCTGCTAGAAGCTCTAGTTCACCTCATCTAAAATCAAATTCTGTCTTCCTGTAAATCTGTTTCCCTTGCTGACTTTCTCATGGACCACCCTTCTCTATCATCCGTGCAATCCATAATTATATAGTCTTTGACTTCTCTCTGCAAAGAGCAGGCCAGTTGCCAGGTTTAGGTCTCTCCTCCTGTACGCCCACACCCTCTGTCTCCCATATTCTCACTAATCACTCCAACACACAGATTTTTGCCAGTCAATTTTCCACTATCAAGAAAACCCCTTTAAATTCCCTTATTAACCTTTAATGATGTCCTTAGTACCCTCTCTAGCAATCCTGACCCCATTACTTCTTATAACCTACCCTCCCTCCCACCTCCATACAAACACACAGGTGTACCCACAAACCTGCTCTGATCAGACTGGTTGCCTCACTTGCACTGGGCTACCTCCATGCTTTCATCCAGGTTATGTGCTTGGGGCCAGGACTGCCATGGGAAGTCCTGAAGTCAAGAAGGGCTGGGTTATGGCAAAGGAGACAGTGGCATGCAGCTGGCAGCACAGTTCAGCTCAACATTCAGCCCAACACCGATACACAGCTGTGCTCTAACTAAAGGAGAGGAACCAGTGAAAACAACAGCCAACATTCACCAAGTATTTACATATCAGACACTGTGCTAATAAGCATTTTACAAGTACCATCTCTTAACACTAAGAATCTCCATTCTAGAAGGTGTTATTACCATCTCCATGTTACACGAGGAAACTGACACAGAGATCAAGTAATTTATGCAGAGTTCCACAGCTAATTAAAGGTGGGCTTGCCACTCAAAGCCCAATGTGTCTGGTCGGAGTATTTTACTGAACCACCATCTCCCAAGTGGGCTAGACTTGCAGGGAATAATCACTTAACTTACATCAAGTCCTTCCTTTCTCCAGTATCATTAGAGAAAGACCCCTTGAAAGGACTGAAAGGACCACATCCAGTTGGAAGCATCTCATGACTAACCACCAGATGAAATGCTGCAGTCATATTTTTACCCATTTCACATTCAATACCAAGCTCCCAAGGACCTCTTCTGCAGCTGCCTCACTGTACATAACCATCCTCATTCAATCCATCTCAAAACAAATTCTGACAATGACACATGAACTGTACATAGTCAGCTGGCCTACCAGGTCCTTTATGCAGCTCAACATATAAGGTGACACCAAGTTAAGACAAGTGAAGTTCCAATTTGGGT EMBV3_34357 TCTGCCGCCTGGCAAGAGAAATATGTGTTCAATTCACTCGTGGTGTGGACTTCAATTGGC Gene GeneID:782601|LOC782601:XM_002698615:30_cdna Constitutive 0 NULL GeneID:782601 27 GENE LOC782601 NULL similar to Histone H3-like centromeric protein A (Centromere protein A) (CENP-A) EMBV3_09675 TCCATGGGATATGACATATTCCTAAGCAGCTGTATGCAATGTATTACCAACAGGTACCCC Gene BVT0102_223658 + 0 NULL GK000010.2:6853383-6896505 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00252 TGCCTGCGTCGCGCTGCCACCGGGCTCCTAATTGTTTTTAATTTGAGGATAATGATAATA Gene BVT0101_034045 + 0 NULL GK000013.2:11134018-11241503 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02612 TGGTAATTCCAGTGCTTTGGAGAATCCTCTGCTGGGTCTTCGGGTGTGTGGATTGGCTGC Gene GeneID:504589|TNPO2:XM_002688762:73_cdna Constitutive 0 NULL GeneID:504589 7 GENE TNPO2 MGC137497 transportin 2 EMBV3_36201 GAAATTCTCCTCTGGGAACCCCATCATCAGCACCAAGAACCATGCGCCCATCCAGATGAA Gene GeneID:616695|LOC616695:XM_002700334:71_cdna Constitutive 0 NULL GeneID:616695 X GENE LOC616695 NULL similar to protein phosphatase 2A 65 kDa regulatory subunit, alpha EMBV3_38651 CCGGGGGAGAAAAATTGTAACTGTAACATTTTGCTCAAGGTGGGCTGTAAGACGGTCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29688 TCCAGGAGGCAAACTGGGTGTTGAGTCCAGTGCAGTTCAAATGACCCTTTTTATGGGATC Gene GeneID:784883|LOC784883:XM_002683623:2_cdna Constitutive 0 NULL GeneID:784883 5 GENE LOC784883 NULL similar to 4932441K18Rik protein EMBV3_27993 TCCGGAATGAGAAGGTCCAAAAGGTCACAGAGGATACGTCCAAAAGGATCGTCCTCAGAC Gene GeneID:100141094|LOC100141094:XM_002707817:451_cdna Constitutive 0 NULL GeneID:100141094 4 GENE LOC100141094 NULL similar to seven transmembrane helix receptor EMBV3_24407 CCCCAGCGGTCCCGCCCAACGCTGGACTCGGTCAGCATGGATTCCTGGTTCCTTCTTACT Variant GeneID:100138017|PTPRA:XM_002692389:308_cdna 282^362 1 EMBV3_20107 GeneID:100138017 13 GENE PTPRA NULL protein tyrosine phosphatase, receptor type, A EMBV3_15275 AGATAGCTCTTATATTTAAAGGTTTCCAATACCACCTTAGCATGCTGAGCAAAAGCTCTG Gene BVV0102_213382 + 0 NULL GK000008.2:38401512-38468512 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01669 CATCATGAGCGTAGTGGACCCCAACCACAGCGGCCTCGTGACCTTCCAAGCCTTCATCGA Gene GeneID:522269|ACTN4:NM_001098052:643_cdna Constitutive 1 NULL GeneID:522269 18 GENE ACTN4 NULL actinin, alpha 4 EMBV3_05231 TGAACACACAGATCCTCAGACAGGCAGACACGGGTGCTCACACGCACTTACTCGCACACT Gene BVT0102_098440 + 0 NULL GK000029.2:46134185-46143362 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165584 TCONS_00165585 1 XLOC_100568 Coding TCONS_00165584 XLOC_100568 Coding Coding LOC508879 29:46141828-46143859 j TSS123657 1764 2 TCONS_00165584_1 57 0.458049886621315 2 0.132019704433498 0.00025452898822333 0 3.14760660927951e-05 0 0 0.000316338486066581 0 0 1.78914105964508e-05 0 0 0 1.68287961996059e-09 3.46665262366587e-05 0 0.0111285788036669 0.000524664404864301 0.00505078810128522 2.0325777474792e-05 0 0 0.000476520479387742 0.000140418918660976 0.00270448245697779 0 0 0 0 0 0.000269255914759061 XM_585724.4 LOC508879 PREDICTED: Bos taurus aldehyde dehydrogenase family 3 member B1-like (LOC508879), transcript variant X1, mRNA. 0.0 3144 99.77 0.993197278911565 NM_000695.3 ALDH3B2 Homo sapiens aldehyde dehydrogenase 3 family, member B2 (ALDH3B2), 1e-52 212 80.89 0.126984126984127 TCONS_00165584_1 sp|P48448|AL3B2_HUMAN AL3B2_HUMAN Aldehyde dehydrogenase family 3 member B2; 3e-25 96.7 68.42 0.982456140350877 0 noncoding 0 0 0 0 0.05480041736415 0.596752967004893 0.0073208281627862 0.882246110045498 GCCCCGCCCTCCTGACCCTCACCTCCCTGCCATTCGCGGGAGTCGGCCAAAGTGGGATGGGAAGATACCACGGCAAGTTCTCCTTCGACACCTTCTCCCACCACCGTGCCTGCCTGCTCTCCCACCCGGGCCTGGAGATGCTGAACAACATCCGCTACCCACCCTATTCTGACTTCGAACAGAAGCTGATCACCTGGGCCTTGGGCAGCCACAGCTGCACCCTTCTGTGAGCACCCTGCCAGCCTCCAGGTCTCTGTCCACGACCCCGGGTGCTCAGTGGCTCCCAGAAGGCAGGGGTCCTGTCCAGGAGCAGAAAGGTCCTGCCCTTGGGGCTTTGTCTGAATAGACGCCCGGCTGGACAGACCTCTGGGCCACCAGTCCAGCCCCTTTCAGGACCAGAGTCCCCTCTGCAGCTTTCTGACAGATTTGTTGACCCTCTGCTTGAACATGTCTGGTGACAGAGAACTCACCCCCTAGGCTGAGCAGCCCTGGTGGTTAGGAAGGCCTCTCTCATGTCAGAACTATAATTAGGCTCCCGAAGTACAGAGTAATTTCTAACGGCTCCAGCCACACCTGGTTTGGGAAGCTGGGTTTGTCTGGGTCTCAGCCTCCCCACCTGCAGTGAAGAACATGGGTCCTTAGAGACGTCTGTGCCCTCCAGGCCAGCATCTGCTGTGCCCGTGTCTGTCCTCCAGGGTTGCACCTGCCCCCTCACCCCTCACTCCTCTCAGCTGTCCCGACCCAGGAGGGAGCCTCACTCCCATCTCACAGGCAGGAGCCAAGGCCCGGAGAAGGCACCGACTCCCCAGGTCACACAGCCTTTCGGGGAGGGGGGTGTTGGAGCCAGTGGGGGCTGGGGGTCCTTCTACTTCCTGGGGCTCAGAGGGGCAATAGCTGGCCCACCTCCGGACTGGTCTCACCGCTGTGGCTTGCACACGTGTTGGTACACCTAGCACAGGTGTGAACACACAGATCCTCAGACAGGCAGACACGGGTGCTCACACGCACTTACTCGCACACTCGGTTGGGGCTGGAGGCTGCTGTTTCTGGGGGCTCTTGTGCCAGTTCCCTGATGCCCTTCCATTCTATGAATACCTTCTGAGGGTGTGGAGAAAAGGGAACTCCCCTACACTTTTCTGTGGGAATATAAATCCGTGCAGTTACTATGGAGAACAGTATGGAGGTTCCTTAGAAAAACTAGAAATAGAGAAACTGATGACCCAGCGATCCCACTAGTGGGCGTATATCTGGAGAAGACTAATTCAGAAAGATACATACAGCCCAATACTCATCGCAGCACTATTTACAATAGCCAAAAGATGGAAGCAACCTAGATGTCCAACAACAGATGAATGGATAAACAAGATGTGGTACATATATACACAATGAAATACCACTCAGCCATAAAAAGTATGAAATAATGTCATTTGCAGCAATGTGGATGAACCTAGAGATTATCACACTAAGTGAAGTCAGTCAGACCAAGACAAATACTACAGACTATCACTTACATGTGGAGCCACAAAAATAGTACAAATGAACTTATTTACAAAACAGAAGCAGATTCACAGACGTAGTAAACAAATTTATGGTTACCAAAGGGGAAGTGGGAGAGGGATCCATTCGGTGTATGGGATTAACATACACAAACTACTATATATAAAATAAGCCACAAGGTCCTACTATACAGCAGAGGGAACTATATTCAATATCTTATGCTAAACTGTAATGGAAATTATTTGAAAAATATATACATAAAACACA EMBV3_41157 CGGCCCGCCCATACCCCTTCCACACCACTTCCAACCTCATAGGAGCCAATGTATTTATTT Gene GeneID:100139549|LOC100139549:XM_002698843:38_cdna Constitutive 0 NULL GeneID:100139549 28 GENE LOC100139549 NULL similar to DET1 and DDB1 associated 1 EMBV3_01400 GGGAGGCAGAGGAGTAAGGGAAGCTCTGAACGAAAACGCTTCAGCCAGGTTTCAGATTGA Gene BVT0102_049664 + 0 NULL GK000002.2:84414879-84734001 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21457 CAGTCGCCCCTGTTTGGAATTCAGCTACTACAACACGATCCCAAGAGCAGGAGGGCGCGT Gene GeneID:539707|TSSK6:XM_002688518:84_cdna Constitutive 0 NULL GeneID:539707 7 GENE TSSK6 NULL testis-specific serine kinase 6 EMBV3_03285 GCCCAACTGGAAAAAGAATTGCTCAAGCGTTCCAGCTCATTGTGACATTATTGGGACCAG Gene BVT0102_180173 - 1 EMBV3_11289 GK000019.2:44082974-44170622 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24555 GGAGAACGTGAACCGCCGCGTGCTGGAGGAGGGCAGGCGGTCAGGGTCGCAATCCCACAC Variant GeneID:510778|CCDC124:NM_001038523:53_cdna 454^732 2 EMBV3_05409 GeneID:510778 7 GENE CCDC124 MGC133908 coiled-coil domain containing 124 EMBV3_13057 CTGTCCACTTCTTTCTCAGCATGGAACTTTTGGTCTTAGCTGTCAGGAACCTCGGTGCTC Gene BVT0102_198044 + 1 EMBV3_12247 GK000018.2:10587119-10609485 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082247 1 XLOC_050947 Coding TCONS_00082247 XLOC_050947 Coding Coding ATP2C2 18:10600231-10688582 j TSS62068 4943 1 TCONS_00082247_6 1107 0.0509811855148695 29 0.944380305602716 0.0023693692840183 0.00132688616733255 0.00128921114799949 0.000333636668632651 0.000163081394017197 0.000463451517243704 0.00141553300644754 0.000651897738143269 0.00113898352386877 0.00024526675315986 4.72710407620425e-17 3.58178169508214e-05 6.03559271581684e-05 3.95657308602362e-36 2.02748696686701e-27 2.91674072302684e-17 8.33180660500686e-11 5.36145610400144e-13 0.00157008458155816 0.00159279240760545 0.000134957814613524 1.87183811570349e-13 1.97553995019784e-12 1.64741778943997e-18 0.000449304570412863 0.000925515504878432 0.0001955712480328 1.37979131521922e-05 1.29487549837992e-13 1.64349519490377e-13 XM_002694745.2 ATP2C2 PREDICTED: Bos taurus ATPase, Ca++ transporting, type 2C, member 2 (ATP2C2), mRNA. 0.0 5860 100.00 0.657090835524985 NM_014861.2 ATP2C2 Homo sapiens ATPase, Ca++ transporting, type 2C, member 2 (ATP2C2), 0.0 3317 84.19 0.610965001011532 TCONS_00082247_6 sp|O75185|AT2C2_HUMAN AT2C2_HUMAN Calcium-transporting ATPase type 2C member 2; 0.0 1637 87.20 0.852755194218609 6 coding 0 0 0 0 -0.0234960529376585 0.873052204532699 -0.0181547955940993 0.717122692017774 CCTACTCCCACTGGGGAGGTTGAGAAGGATGGTCTCTCTGTATCCCCTTGCATGGTCTTGGCAGATCTGGTATCCTTTCACCAAATTCCCTTTTTTGCTTAAAATACCCAGTTTCTGCTGCTTGTAGCCAGGAGGTTGGTAACTGATACAGCTGGGTGAAGCTTAGCATTAACTGAGTGCTAACCAGAGCACCGAGGTTCCTGACAGCTAAGACCAAAAGTTCCATGCTGAGAAAGAAGTGGACAGTTCGTCAAGAAAGAAAAGCCTTTTTTTTTTCTTCTAAGTTATCATATCGCATGATGCTCACCAGACTCTGAAGAGTCAACAGAATTTTTTCTAAATTAAACACAGGAACCGTAGGATGCCCTCCGGCAGGTCTTGGCATGGGCTCTACCCATGATAACAGCCCCCGAGGACAGCACCCCTGCTAGTCCATCCAGTCCCCTGCTTTGTAGGGGTTCAGAGAGGACGCCTGTTCTCTGCCTCGAGCCTCTGTGAACCTACAGCGGTGCAACTCGTCCCCCCGGGACCTCTGCCCAACCTGCCTGAGCCCACCTGGCAGCCCCGTGGACCCCAGCTGGGCTCACTCAGCACCAGGTCTGAATGTTGCACAATATCCACTGCCCAGAATCTGCTTCCTGAATGCCCTGGACATACTCGTGCCTGACCCACAAATTCTTGACAATCTGAGCTGGAGCTGAGGTGGAGCTTTCAAGGCAAAGATATTTGCCCAACACATCACCCCCTGCTCACAAATAATCTGTTTATCAAACTTTCGCCAAAGCACTCAGTTGGAGGTGCCAAACCCTGACTTAGATAGGTGGTGTCACTCCCATTTTGTGGGTGAGTAAGCTGAGGTGCAAAAAGGGGATAAGAATCGCCCAAGGTCACCCGTCGGCTAGGAACAGGCCTGGGATTAAAATCTGACTCACACCAGAGTCTTGCTTTTCCTGTCACTTCCGGGCCTTTGCTGAAATTGATGGAAGTGGGCAGCGTTGTTTCTGCGAAGAGGGGAAGAGGCGGGAGAAACAAGAAGGGCTTCTAGAACCCACTGGGTTGAGTGGGGCTGACGTGGCCACCCCTTGGGGAGCAGCTGGGATAAGTGGCAAACACATACACGTGTCCTGCCCTACAGTCCTTAAGTAACCCCACTCGACAGATAAGAAAACTGAGGCGCAGAATAGCGGCACAGCCTCCTCTGAAGCCCCCTCCCCACTAAGCAGTGGGTCTTGTTCTGGATTCCCGTGCTGTGTGAAGCCAAAACACTTACACATCTCAGTATATCCACTTGGAGGCTGGAACCCGTCTACACTGCACATTCACCCACAGGCTTTGGGAGCCATGTGAGCCCAGTGATGATGAGAGTGACTATGCCATCCCCATACCCCATACACTATGCCAAGCCCTGCCCTGAGCTCTTCCCATATAAGACGGCCCAGCAAATTTCCTCTCAATTTCACTATGAAGGAGGTGCCATCACGGTGGCCATTTTACAGATGACTGCATCTCACGATTGGGCAAGTTTGGGAAACAGCCCAAGCTTTGAGGCCCCTCCGCAGCCCCCGGGGCCTTCCCCAGGCCGCCGCGGCCCCTCAAGGGCGGGAAAGTCCGGGAGGGGCGGGGCCCGGTGCTCCGAGGGCCTCCCTGTGCGCAGCTCCGCCCCGGGGGTGGGGCCTCACCTGCGGCAGGCAGGTAGGCGGCTACCTGGTAACCTGGGCCTGGCCCGGGAGGCTTGGGCGCGCGCAGCCAGCCCCGGCCACGCCAGGGACCGAGGGACGCAGGCACAGGCGGCCGCCGGCGGGACGGGAGGCTGGGCGAGGGGCCTGCACCCGCTCACTATGGTCGAAGGACGCTTCTCCAGGTTGCTGCAGAAGCTCGCCTTCTGGGGCTCGAGCCACAAGTACGAGCTGCTGGCGAAGGGCGAGTTGGAAACCTTGATTGATGGACAAAATGACTTGAAAGCTATCGAGAAAGAGAAGACAGTGGTGGCTCTGGAACCCAAGGAAGCAAGCAAATGCCACAGAGAGGACCTAGCCAAAGCATTTTACGTAGATTTACAGAATGGGCTGTCAGAGTTCTCAGTGACGCAGCGCAGGCTGGTCCATGGCTGGAATGAGTTTGTTGCTGATAACACGGAACCTGTGTGGAAGAAATATCTCGATCAGTTCAAGAATCCCCTGATCCTGCTGCTCCTGGCCTCTGCCTTGGTGAGCGTCCTCACAAAGAAGTATGAGGATGCCATCAGCATCGCCGTGGCTGTGCTGATCGTGGTCACCGTCGCCTTCATCCAGGAGTACAGATCAGAGAAATCTCTGGAAGAGCTGACAAAGCTGGTTCCCCCCGAATGCAACTGCATAAGAGAAGGAAAGCTCCAGCACCTGCTAGCTCGAGACCTGGTACCTGGAGACATCGTGTCTCTCTCCATCGGAGACCGCGTCCCTGCTGACATCCGTCTCACAGAGGTCACAGACCTCCTGGTGGACGAGTCCAGTTTCACGGGAGAAGCCGAGCCAAGCAGTAAGACAGATACCCCACTGACAGGCGAGGGTGACCTCACGACCCTGAGCAACATCGTCTTCATGGGGACCCTGGTGCAGTGCGGGAAGGGCCAGGGCGTCGTGATCGGAACAGGAGAAAAGTCCCAGTTTGGAGAGGTGTTCAAGATGATGCAGGCTGAAGAGACACCTAAAACTCCTCTACAGAAAAGCATGGACAAGCTGGGGAAGCAACTGACACTCTTCTCATTCGGCATAATTGGCCTGATCATGTTCACTGGCTGGCTGCAAGGGAAACACCTGCTCAGCATGTTCACCATCGGGGTCAGCCTGGCTGTGGCCGCCATCCCCGAGGGCCTGCCCATCGTCGTCACAGTTACGCTGGTCCTGGGAGTGCTGCGCATGGCCCGGAAGCGAGTTATTGTGAAGAAGCTGCCGATCGTGGAGACCTTAGGTTGCTGCAACGTCATCTGTTCCGATAAGACGGGGACTCTGACTGCCAACGAAATGACTGTCACCCAACTCGTAACATCTGATGGGCTCCATGCCGAGGTCAGCGGAGTTGGCTACAACGGCAATGGGACTGTCTGCCTTTTACCCTCCAAGGAAGTCATTAAGCAGTTTTCCAACGTCTCGGTGGGGAAGTTAGTGGAGGCAGGCTGTGTTGCCAACAACGCCATCATCAGAAAAAACACCGTGATGGGGCAGCCAACAGAGGGCGCCTTGGTGGCCCTGGCAATGAAGATGGACTTAGGCGATATTAAAGATTCATACATCCGAAAGAAAGAGATCCCGTTCAGTTCGGAGCAGAAGTGGATGGCAGTTCAGTGCAGCTCCAAGAATGAGGAGCGGGAAGATATGTACTTCATGAAGGGGGCCTTTGAGGAGGTGATTCGTTACTGCGCCATGTACAACCACGGGGGCATCCCCCTGCCGCTGACGCCCCAGCAGCGAGCCTTCTGCCAGCAGGAGGAGAAGAAGATGGGATCCCTGGGCCTGCGAGTGCTGGCCCTGGCCTCCGGGCCCGAGCTGGGGAAGCTGACGTTTCTGGGTCTCATCGGAATCATCGACCCTCCCAGGGCTGGCGTGAAGGAAGCAGTCCAGGTTCTCTCGGAGTCGGGCTTGTCTGTGAAGATGATAACGGGGGATGCTCTGGAGACGGCCTTGGCGATAGGAAGGAACGTCGGTCTGTGCAATGGGAAGCTGAGCGCCATGTCCGGGGAAGAGGTGGAAAGCGCCGAGCAGGGAGAGCTGGCCGAGCACATCGGGAAGGTGTCCGTCTTCTACAGGACCAGCCCAAAGCACAAACTCAAAATCATCAAGGCTCTGCAGGAGACAGGGGCGATTGTGGCCATGACCGGGGATGGGGTGAACGACGCAGTCGCCCTGAAGTCGGCGGACATCGGCATCGCCATGGGGCAGACGGGGACGGATGTCAGCAAGGAGGCCGCCAACATGATCCTGGTGGACGACGAGTTCTCGGCCATCATGAACGCAGTGGAGGAAGGCAAGGGGATTTTTCATAACATCAAGAACTTTGTCCGCTTTCAGCTGAGCACGAGCATCTCGGCCTTGAGCCTCATCACGCTGTCCACCGTGTGCAACCTGCCCAACCCCCTCAACGCCATGCAGATCCTGTGGATCAACATCATCATGGACGGGCCGCCGGCGCAGAGCCTGGGTGTGGAGCCGGTGGACAAGGACACACTCCGGCAGCCGCCGCGGAACGTCAAGGACCAGATCCTGAGCCGAGCCCTTGTCCTGCGGATCCTCCTCTCGGCCACCACCATCATCAGCGGGACCCTCTTCATCTTCTGGAAGGAGATGCCTGAGGACAGGGCAAGCACCCCGCGCACCACAACCATGGCCTTCACCTGCTTCGTGTTCTTCGACCTCTTCAACGCCTTGACCTGCCGCTCCCAGACCAAGCTGATCTTCGAGATCGGCTTCCTCCGGAACCGCACGTTCCTCTACTCTGTGCTCGGCTCCATCCTGGGACAGCTGGCTGTCATTTACACGCCGCCCCTGCAGAGGGTCTTCCAGACAGAGAGCCTGGGGGCGCTGGATTTATTGCTTTTAACCGGATTGGCCTCGTCTGTGTTCATCTTGTCAGAGCTCTTCAAGCTGTGTGAAAAGTTCTGCTGCAGAGCCCAGAAAGCCCAGACCCCCCAGGAAGACGCATAGTGGACCCTGACCCGTGGGAAGGTCCCTAAATCTCTATTTTCATATGACTGTGGCCCTCCGCCTGCCCCGTCCCTTCCGAGACGTGCCTGAGGACACGCCAGTGTCGGGTCCGCTCACCTGGCTGTTCCTGGGGAGCCGGTGGGGCGTGCAGGCCCAGCCCCGAGTCCTCGGTCCCTGTGTGCATCCGCCGCTCCGTGCTGCCGGGCCCTGGGACGATCCATGAGGAGCCGGCACTATTTATTAAATGATGGTGATTTTTATGAA EMBV3_39165 AAGAACCAGGCAGTCAGATGATAGAAGCCCACCTCTCCATCCAGCACCCAGAGTACAACA Gene GeneID:507800|KLK4:XM_002695136:663_cdna Constitutive 0 NULL GeneID:507800 18 GENE KLK4 NULL kallikrein-related peptidase 4 EMBV3_13367 CACTCCACCAGTGCTGCTAATGGAGCAAACAGTACAAACAGCAAATCTGTAGTGGCTCAG Gene GeneID:516489|SMEK2:XM_002691329:484_cdna Constitutive 0 NULL GeneID:516489 11 GENE SMEK2 NULL SMEK homolog 2, suppressor of mek1 (Dictyostelium) EMBV3_18999 CCCTTCGGACATTCCTGGAGACCACTCTGGAGGACATTAGGACAGCTCATCACAGCCGTG Gene GeneID:511835|CCDC78:XM_002697971:706_cdna Constitutive 1 NULL GeneID:511835 25 GENE CCDC78 NULL coiled-coil domain containing 78 EMBV3_11499 TCAGGGAGGGCACACAGAGGCCCCTGCCGTTCTCCTTTTCCCGAAGAACTAAATGGCATA Gene GeneID:518209|C17H22orf25:NM_001035328:70_cdna Constitutive 0 NULL GeneID:518209 17 GENE C17H22orf25 C22orf25 DKFZp761P1121 MGC137947 chromosome 22 open reading frame 25 ortholog EMBV3_22326 CGAAGACCCTACCCAGGGGAGGACTTCTGGGTGGAACCTTTTGCCAGCTTGTCCGATGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38518 GAACCTGGGGCCAGTGATAGATGGGTTGGAGAGGAATAACAGTGTAGAAAGGAAGACTAG Gene BVT0101_040483 - 1 EMBV3_19819 GK000016.2:24236389-24256259 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01816 CCGGGGTACTGATTACGAGTGCTTTGAAACTGAAGAGGTGGGATTCGGTGCGTGTTCACT Gene GeneID:517514|DBX1:NM_001098998:25_cdna Constitutive 0 NULL GeneID:517514 29 GENE DBX1 MGC160114 developing brain homeobox 1 EMBV3_10327 CCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTATG Gene BVV0102_095606 + 1 EMBV3_22644 GK000001.2:129041631-129089262 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00232824 TCONS_00253103 TCONS_00118040 TCONS_00210913 TCONS_00174805 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00171428 TCONS_00250276 TCONS_00238380 TCONS_00174806 TCONS_00250277 TCONS_00174807 TCONS_00232829 11 XLOC_151107 XLOC_142307 XLOC_156044 XLOC_072206 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_153219 XLOC_145047 XLOC_153220 XLOC_142312 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_24775 GGAGAAGGACATCTCTGTCAGCGTCATCGGGGCCACGCAGATCAAGAACACCAACAAGAA Gene GeneID:788775|DLL1:XM_002690401:14_cdna Constitutive 0 NULL GeneID:788775 9 GENE DLL1 NULL delta-like 1 (Drosophila) EMBV3_00216 TGGTGCCTACCATGCAGGACTGTAGTGGAACCAGATCTCAACAATGGCTGCTAAGGAACA Gene GeneID:532545|GALNT13:NM_001076886:109_cdna Constitutive 0 NULL GeneID:532545 2 GENE GALNT13 MGC143063 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13) EMBV3_22803 CCTCTATCACCAGCTTTCCAGCAGTAGTTACAGTGTAAAAGTACCTGTGAAGATTAATTT Gene BVV0101_012559 + 1 EMBV3_23425 GK000003.2:51325806-51326158 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169856 TCONS_00169861 TCONS_00169853 TCONS_00169860 TCONS_00169862 TCONS_00169858 TCONS_00169857 TCONS_00169855 TCONS_00169854 1 XLOC_103454 Coding TCONS_00169862 XLOC_103454 Coding Coding GLMN 3:51303437-51326155 j TSS127070 1603 1 TCONS_00169862_3 220 0.0455396132252027 11 0.929920323986442 1.39942868845454e-51 0.000367385470718601 8.87216378265931e-11 0.000302313785056875 6.66462436681131e-24 3.79977135730049e-25 0.00112251831984908 9.18031832491174e-22 0.000688135445466266 0.000430054260075099 0.000384557449718746 0.000299510396807257 7.10324914058998e-05 0.000129373163966938 0.00124496696999701 0.00176079103397787 2.78460051746229e-158 0.00226813880834424 0.000121963216687656 2.26343666182274e-15 8.1710789599495e-300 0.00232985096790814 0.00213886698967768 0.000286909133648668 0.00102887601053636 0.000385495413689582 1.16172281520498e-12 0.00043348360312272 0.000185689953855814 0.000137733352832515 XM_005204258.1 GLMN PREDICTED: Bos taurus glomulin, FKBP associated protein (GLMN), 0.0 2729 100.00 0.943231441048035 NM_053274.2 GLMN Homo sapiens glomulin, FKBP associated protein (GLMN), mRNA. 0.0 1276 90.02 0.586400499064255 TCONS_00169862_3 sp|Q92990|GLMN_HUMAN GLMN_HUMAN Glomulin; 5e-137 401 90.50 0.995454545454545 1 noncoding 0 1 1 1 0.115873297800714 0.560005273915733 -0.00285689532284228 0.960216209463328 TGAAGGAAGATTTGTTACATGGCAAATGTCCAAAGCCTCGGCCTACAAGGCAGGAATTTCCAAGGGTCTCCTGGCACAAAACAGAGGAGTCTGTTTTCTCCAAAGGATTGGATCTGTTGGAGAATGGTTTATTGAGAATAGAGGACAACAGTCTACTTCACCAGTACTTAGAAATCAAGAGTTTTCTTACTGTACCTCAGGGCTTAGTCAAAGTAATGACCCTCTGCCCCATTGAGACATTGAGGAAAAAAGGTTTAGCTGTGCTTCAGCTGTATATTAACAAATTGGATCCACAAGGCAAATATACATTATTTAGGTGCTTACTGAGTACAAGTAATCACTCAGGTGTGGAGGCCTTTATTATTCAAAATATCAAAAATCAAATTGACATTTCGTTAAAGAAAACACAGAACAAATGGTTTACAGGACCACAGCTGATTTCCCTTCTGGATTTGGTACTCGTTCTCCCAGAGGGTGCTGAAACAGATCTACTGCAAAACTCAGATAGGATAATGGCTTCATTGAATTTATTGAGGTATTTGGTTATCAAAGATAATGAAAAAGACAATCAAACTGGTTTGTGGACAGAACTTGAAAAGATTGAGAATAATTTCTTAAAGCCCCTCCATACAGGACTCAATATGTCAAAAGCACATTATGAAGCAGAAATTAAGAATAGCCAAGAAGTCCAGAAGTCTAAAGATCATTGTTCACTAAATGTAGGTAGAGAAGAGATCCCAAATATGCCTCCTGAAATGCAACTTAAGGTCCTACATTCAGCTCTTTTCACATTTGATTTGATTGAAAGTGTTTTGGCTCGAGTAGAAGAACTCATTGAAACAAAAACAAAGTCTACCTCTGAGGAAAATATGGGATAAAGTGAAAGCTCCATCTCCTAAATAAAAACTAGTAATACACTATATTTTTCATTATGGTTTATTTAATACCTTTATAGAAGTTTTTCTGTAAAACACACTGAAAATAAATGTAGCTTCTCTTACTTATCTGTTTCAGCAGTGACACATTATGGATCAGTAGCACTGTTTCCTTTTAAAAAGGTATCTATATGGTAAATAATGCCCACGTGTATTTTAAATACTACTGTTGAAAAATCTAATACGAATCAATAATTTTATGATTTCATAAAATGTACTGGAATTACCTTTATCCATACAGTTGTGAGTTTATAAAAATTCTGATACACTTTATGTTCCAGTTAGATGCTATTTTAGAACTCCTAGTGTTAAACTGGCTATCATAGCACTGTAGGAGCTTAGAGAAAAATTCTGAGTCTGTGTACTACTCCTAATTTCCCTTTTTTTCCCTGCCTCAGGAGTCTTAGAGGGCAGAGTCCTCTATCACCAGCTTTCCAGCAGTAGTTACAGTGTAAAAGTACCTGTGAAGATTAATTTTAGAAATAGTGGCTTGTATTATAAAAAGGTATATATGACTTTTTCTTTAACCCAAGGGGCTGCTTATTTGCAATTAAACATTTCTTCTTCCAACTTAATTTGTATCATTAAGAAGCTTCAATCTAAGTTTTATATACATGTACCAATATTTTTTGAACATTATTAAAGGAATTAACAGAACTCTGAAAGTA EMBV3_09044 CACTCTGCAGCCTTCAGTGCTATCGCATCAATTTGCAGATGCGGCTAGGTGGGCCTGAGG Gene GeneID:509187|INO80B:NM_001105347:11_cdna Constitutive 1 NULL GeneID:509187 11 GENE INO80B ZNHIT4 INO80 complex subunit B EMBV3_14881 CTTCAGCGGTGTTTACCGTTTAAACATAAGTCAACAAGCAGATAAATGACAAAGAGCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14103 GTCCAGTTTCCCTTGTGGGAGTCCTTAAAAGTGGCTTTGCAGCTGCAGTCACCACGCCTC Variant GeneID:614713|SLC25A26:NM_001103297:62_cdna 808^877 6 EMBV3_07353 GeneID:614713 22 GENE SLC25A26 MGC166132 solute carrier family 25, member 26 EMBV3_10298 TGGTTACTGCCTGCTGGACCCTTACGAGTCTTGTTGCCATGACGCACACCTTCCTCATAT Gene GeneID:520835|LOC520835:XM_002695694:270_cdna Constitutive 0 NULL GeneID:520835 19 GENE LOC520835 NULL similar to cOR1P2 olfactory receptor family 1 subfamily P-like EMBV3_40287 TCGATCCCGACGAGCTGAGCCTTGACCTATCAAAGAACCTGTCAGAAGAACAAATTGCGG Gene GeneID:522114|IL1RL2:XM_002691180:77_cdna Constitutive 0 NULL GeneID:522114 11 GENE IL1RL2 NULL interleukin 1 receptor-like 2 EMBV3_39249 ATCTGTGTTATTTGGACCACTTCAGGCTTTACAGATGGCTGACTGCATTGCTAGCTCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24878 GTACCGCCTGGGCTTCCTTGGCTTTTTCAGGTCCTGTCCCCGCTGGCTGCAGGGCTGTTC Variant GeneID:513112|CES3:XM_002694809:663_cdna 599^752 1 EMBV3_35031 GeneID:513112 18 GENE CES3 NULL carboxylesterase 3 EMBV3_12430 CCGACGGAAGCCACAGCAGTTCCCCCACCGTTTTGAATTCTAGTGGCAGAATGGATGAAT Gene GeneID:536911|LOC536911:XM_002697262:5_cdna Constitutive 0 NULL GeneID:536911 23 GENE LOC536911 NULL similar to runt-related transcription factor 2 EMBV3_12191 GGAGTAGGAAGAACATGGAATCCATCTCTACCTAGGCAACAATTATACTGGCAGACTGTC Gene BVV0102_319757 + 1 EMBV3_03983 GK000011.2:94092094-94102997 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025936 TCONS_00025937 1 XLOC_014885 Coding TCONS_00025936 XLOC_014885 Coding Coding RABGAP1 11:94092978-94265148 j TSS18719 6162 1 TCONS_00025936_5 1069 0.0245050308341448 27 0.964366407425262 2.32874240613657e-31 2.40668479206612e-33 0.000119387051593662 0.000251780240198916 6.72432715033194e-28 0.000341122890645592 0.000158574679762867 0.00199285698701991 2.47309026428981e-05 0.000110070362351451 9.23197444629281e-06 4.34568086973691e-05 8.57112848685714e-06 8.56443272291478e-05 2.33266742133135e-27 0.00348378575818549 3.62196232109273e-69 1.00325441694116e-34 1.5635696351932e-17 8.35873631699013e-05 5.86942610991525e-05 0.000136585464727715 0.000854860582434187 0.000608658365361951 2.21760234510255e-109 1.70735782314526e-72 0.000112485806460633 6.28222440852663e-09 0.000136908024336706 0.00032945940030837 XM_005213132.1 RABGAP1 PREDICTED: Bos taurus RAB GTPase activating protein 1 (RABGAP1), 0.0 9458 100.00 0.850860110353781 NM_012197.3 RABGAP1 Homo sapiens RAB GTPase activating protein 1 (RABGAP1), mRNA. 0.0 6435 89.17 0.789678675754625 TCONS_00025936_5 sp|Q9Y3P9|RBGP1_HUMAN RBGP1_HUMAN Rab GTPase-activating protein 1; 0.0 2180 98.32 0.999064546304958 3 coding 0 0 0 0 0.00280004251425059 0.981803255217973 -0.00348679265034313 0.950089306778974 GGCGGGCCAGGAGAGGGATTCTCCGTGCCGTGGGCGAGATGATCGGGTACCCCGGGCTCCCGCTAGCTTCTCCGCCCGCGTGAGCCGACGAGCAAGTGCTGTGGCTTCTTAGCGCCTGGGGCTCAGGCCCCGCGCACTTCGCTCCTTCTCAGCCGCTCCTCTCTAGCTACGACTCGGCCGTCTGCCGTCTGCGTGGGCCTGAAAGGCGCAGCTGCACTTAAAGCGTCGATGGAGTAGGAAGAACATGGAATCCATCTCTACCTAGGCAACAATTATACTGGCAGACTGTCTGAAGTAACTATTTCGGAACTCTGGAATCTATTTGAATGCTTGCATGTTCCAGGGGAAAATCTGGTTGGTCATCTGAGGTTAATTTCAGTCAAGGCATTTTTAAAATATTTAATCATTCATGAGTTGAGCTTCATTCTTGAGTCATGGATGACAAGGCTTCTGTTGGAAAAATCAGTGTCTCCTCAGACTCTGTGTCTACTCTTAATAGTGAAGATTTTGTCTTGGTTTCCAGGCAAGGAGATGAGACACCATCTACAAATAATGGAAGTGATGATGAGAAAACAGGACTCAAGATTATAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTGCTGATGGATCCTCCAATGGACGACCAGCCAGGGGACAAGGAGCTTGTGGAAAGGTCACAGCTGGATGGCGAAGGAGATGGGCCTCTTTCTAATCAACTCTCAGCTTCATCCACCATTAACCCTGTGTCATTAGTAGGGCTCCAGAAACCAGAGATGAGCCTGCCAGTGAAACCTGGACAAGGAGATTCTGAAGGGTCAAGTCCTTTCACACCAGTGGCAGATGAGGACAGTGTAGTTTTCAGCAAACTAACTTATTTAGGCTGTGCCTCAGTAAATGCTCCCAGGAGTGAAGTGGAAGCCTTGAGGATGATGTCCATCTTAAGGGGCCAGTGTCAGATCTCACTAGATGTAACCCTGTCAGTGCCGAATGTATCTGAAGGAACTGTGAGACTCTTAGATCCTCAGACAAACACTGAAATAGCAAACTACCCTATCTACAAAATCCTTTTCTGTGTCAGAGGGCATGATGGAACTCCTGAGAGTGACTGTTTTGCTTTCACTGAAAGTCATTACAATGCAGAGCTCTTCAGAATACATGTCTTTCGGTGTGAAATACAAGAAGCTGTGAGCCGGATACTTTACAGTTTTGCCACTGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTTCAGCAACTGCTGCGCCTCAGACTCCAGACAGTGACATCTTTACCTTCTCTGTGTCTCTAGAAATAAAAGAAGATGATGGTAAAGGTTATTTTAGCGCAGTTCCTAAAGATAAAGACAGACAATGCTTTAAACTCCGACAAGGAATTGATAAGAAGATTGTCATCTATGTGCAACAAACAACTAATAAAGAACTTGCCATTGAAAGATGTTTTGGTCTTCTCCTTAGCCCAGGGAAAGATGTACGAAATAGTGACATGCACTTGTTAGATTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCCTATGTTATTACTGGGAGCTGGAATCCAAAATCCCCACATTTTCAAGTTGTAAATGAAGAAACTCCTAAAGATAAAGTGCTGTTTATGACCACAGCTGTTGATTTGGTAATAACAGAAGTACAAGAGCCTGTTCGCTTTCTTCTAGAGACAAAAGTCCGAGTTTGCTCACCTAATGAAAGATTATTCTGGCCCTTCAGCAAACGTAGTACTACTGAAAATTTCTTTTTGAAACTAAAACAGATAAAGCAAAAGGAGAGAAAGAACAATACTGACACTTTATACGAAGTTGTATGCTTGGAAAGTGAATCAGAGAGAGAGAGGAGGAAAACTACAGCCAGTCCCTCCATTCGCCTGCCACAGTCAGGATCTCAGAGTTCAATGATACCTTCTCCTCCAGAAGATGATGAAGAGGAAGATAACGATGAGCCTCTCTTGAGTGGATCTGGTGATGTATCCAAAGAATGTGCAGAAAAAATTCTTGAAACATGGGGAGAACTGCTGTCTAAATGGCATCTCAACTTGAGCGTGAGGCCAAAGCAGTTGTCATCCTTAGTAAGAAGCGGTGTTCCTGAAGCTCTTCGAGGAGAAGTCTGGCAGCTCCTAGCAGGTTGTCACAACAATGACCACCTGGTAGAAAAATACCGAATTCTCATCACTAAGGAGTCTCCCCAGGACAGTGCTATCACTCGTGATATTAACCGGACATTCCCAGCCCATGACTACTTTAAGGACACAGGAGGAGATGGACAAGATTCTTTATATAAAATATGCAAGGCTTATTCTGTGTATGATGAAGAGATTGGCTATTGCCAAGGCCAGTCATTTCTCGCTGCTGTTCTGCTTCTCCATATGCCTGAGGAACAAGCATTCAGTGTTCTGGTCAAGATCATGTTTGACTATGGTCTCAGGGAACTTTTCAAACAAAACTTTGAAGATTTGCATTGCAAATTTTACCAGTTGGAGCGCCTCATGCAGGAGTACATCCCTGACCTGTACAACCACTTCCTGGACATAAGCCTTGAAGCGCACATGTATGCCTCCCAGTGGTTTCTTACGCTCTTCACTGCGAAGTTCCCTCTGTACATGGTCTTCCATATCATCGACCTGCTTTTATGTGAGGGAATAAGTGTTATATTTAACGTCGCCCTTGGGTTATTAAAGACTTCCAAAGATGACTTGCTACTGACAGACTTTGAAGGTGCCCTGAAATTCTTCAGGGTTCAGCTTCCTAAGAGATACCGCTCAGAAGAAAATGCAAAAAAACTAATGGAACTAGCTTGCAACATGAAGATTAGTCAGAAGAAGTTGAAAAAATACGAAAAAGAGTATCACACCATGAGGGAACAGCAGGCCCAACAAGAAGACCCCATCGAGCGATTTGAGCGAGAGAATAGGCGCCTACAAGAAGCTAACATGAGGTTGGAACAGGAAAATGATGACTTAGCCCATGAGCTGGTGACCAGCAAGATTGCACTGCGAAAAGACCTGGATAACGCTGAGGAAAAGGCAGATGCACTGAACAAGGAGCTGCTTATGACCAAACAAAAGTTGATTGACGCAGAGGAAGAGAAAAGAAGGCTGGAAGAAGAGTCTGCTCAGTTAAAAGAAATGTGCCGTCGGGAACTGGACAAGGCAGAATCCGAGATTAAAAAAAACAGCTCTATCATTGGCGACTACAAGCAGATTTGCTCTCAGTTGAGTGAAAGATTGGAGAAGCAGCAGGCTGCTAATAAAGTGGAGATTGAGAAAATTCGGCAAAAAGTAGATGACTGTGAACGCTGCCGGGAATTTTTCAACAAAGAAGGGCGCATAAAGGGCATGGGCTCAGCTAAGGAAGTTGTGGATGAGGATACAGATGAGGAGAAGGAAACACTCAAGAACCAGCTGAGAGAGATGGAGCTGGAACTGGCACAGACCAAGCTGCAGCTGGTGGAAGCGGAGTGTAAGATCCAGGACTTGGAGCACCATTTAGGCCTTGCCCTCAACGAGGTCCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGCTCCATAAAGACAGCAACTGGGGTTCAAGGGAAAGAGACTTGCTGAGAGCAGCTGCTGCCTCCAGACCCTTCGGAAAACATGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACATGCCCCAGGACAGAATGTCCGCAAGTCAGATCCATAGAAGCCTGTCGGGAGGTCACTGTGGACCAGAGCTCGTGAGGCCCTCCTCACTGCTGATACTAACAGGCCCGCTGACTCGCCTGCCGCTCTGGACACTCCGAACGTCACTCCTCCATGTGACCTCCGGCCTCTTCCCAGTTAGGTCAGCTCATATCCAGCCCAGCATCCGAGTTGACGTTATCAGAGTTTGGGGATCTTCAGGCTGTTGGTTTTTTTCTAAACCTTTAATTTTTTTTTAAAATACACACACACATACAAATATATATATATATATAAATATATATATATATAGGGGGACGTAGAGCAGGGGATCAGTAACTCAAGTACCTGCTCCAGTGCCAGCAGAGGGTCCTCTGTGTAGACATGGAGAAGCACTTTGTTTAAATAGGAGGGTTTCATGCTTGTAGTTGAAGCCACCTAGTTTTGTTAAACTCTACAATGCACAGGTTTTGGTTCGGCATCACTCACGTTTCTGATCAATTCTATGCAACTCTCATAGTTTCTGTTGTTCTTATTGTTAGCTGCCAAATGACTCCACAGCGCTGGGGCGGGTGACTTGACCGACTGTGAGACTGGGTTAATCGTAACATGGACAAATCTTATTTTGCTTCATGTGTCTGTGTGTGTGTGTGTGTGTGTATAGATATCTTTTTCCCAATGCACCCAACTGACAGTGTTTAAATCCCAGACTAGGACTGATCTGCACAAGTTAATTACGTGGTTATTTGGGCACTTACTGCATTCAAGGTTTGTCGGGCTCTGCTCTCTACCCTGCTGGTGTGAGAGCTGTGAAGAGCACCTTCACTTCAAGGTTCCTAGTGTTTCTGCACAACAGGTTGTACAAGTGAGAAAGACTTTGAGTTCTGTATGTGTGTGAGAGAGAGAGTGTGAATGTAAGGCTGTGCAGACACATGCCAAGAGGCCCACGTCCTGCTGGCCTGTGTCCCCGCCTGCCTGGGCCCTCCCTGGGGTGAGGCCAGTGCAAGCCTTGCTCTTCGGATGGGCTGCAGGTTCTCACTTCAAAACTATAGAATGGGGGTTTTAGCACCTTTTTTAAAAAAATAACTTTAGACTTTTAATTTATATAGTGGTAACGCTGACAGGCTGTCTCGCAGATGATTCTGCCGTCTTCTGTGCGTGCAGTGTGGAGTAGCTGGTTACAAGAGGCACTGGTTTGTATATAAAGAGACTTGGGTGGTTTTGTATCTCTTTTTTCCTGTTGGCTGTATTAACACTTGCTGAAGTCATCTGTGATAAGGGAGGTAACAAGCGGCAACCCCTGATCCCCCCAGACCATCCCCTCCACTGCTGTCTGTGTCCTTGTTCAGTTACCAAAACAGCTATGCGCCCATCTAAAACTAGGTGTGTGGACATTGTGCTAGGGTAGTTTCAGTGTGTCAACTTTATGAATTGAAATATAAACCAGTAAAATTGTATTACTGTTTCTTTTGTTGGTTTTATTTTAACAGCATATTCATTAAATATTTTGGTACAAACAGCATCACTTTGTAAAAACCAGTTTTATCATTACGTGCTCTTGCCCACTTCCTCCCCCGCTCCCGCTCTGGGCTGAGATGCGTGTGAGCAGCCATGCATGCCAGGCCCGTGGCGGGTGGCGGGGTTGGGGGAGAAGACACAGGCTTTGTTCCCCGGGGGCTGCTGCCGGCACCTTCCTCGTGAGCACTGTCCGTCCTGGAGAAACGAAGTGCTATGGTGATGGGTGAGATGTGACTCGTGTGCTACAGGTTTAGGGAAGTCTTAATGGAGGTGAGCGAGTGGTAAGACCTTGAAAGACAAAAGCATCTTACCAGGCCGAGATGGAAGAGGGCACTGCGGGCCCCAGATGTGCACATGCAGGGCAAGCGGCCGAGGGGCAGAAGTGGTCAGTACCCAGACTCTCTGGGAAGAGTGCTCCTTCCGACCACTGCTGGTCTTCCTACGCTGCAGCCCCCCAGGAGGAGGCTCCCAGACGGGCCGTCCTTCACCACCTCACCCACTTCTCTGCAGCAGGAAGAAGAGAGCAGTGCTCCCCGCACCCGACGGCCCCTGCTTGCTTGACCTGCCCTCCACGACCCCGACACCAGTCTCTGGATGAAGCAGGCTGAGCTGCAGGCCCCGGAGAAGGGAAGGCGGTGAGTGAGCCCTGCCCCGTCTTCTCTCCACAGCCCAGATGCAGGCCTGGTACCTGGCAAGTGGCCGGGCTGTGACAGGAGCTCTGCGAAGGCCGGCACAGGGACTCTGGAGGACAGGTGGGATCCCTTTGCTGCTCAAGGCCAGAGGGCACGTTTCTGGGGTCCATGTTCCCGGCCAACCAGGTCGAGAGTCCAGAAGGGCTGGCCTGCCCCTGGCTTTTCCCTGCCCCAGAGTCACAGTGTGAGGAGGATAGGGGCTTGCAGAAATC EMBV3_03490 ATGTCCTGAGAATGGATCTTGTGTACCTGATGGTCCAGGTCTCTTGCAGTGTGTCTGTGC Gene GeneID:100125942|APR3:NM_001105505:5_cdna Constitutive 1 NULL GeneID:100125942 11 GENE APR3 MGC148874 apoptosis related protein 3 EMBV3_28560 GACTGGAGTGAACCCAGCCTTCATAATGGGAGCAAGAAGAAAGGCGATGAGGAAGTATGC Gene GeneID:536341|SLC26A5:XM_002686758:47_cdna Constitutive 0 NULL GeneID:536341 4 GENE SLC26A5 NULL solute carrier family 26, member 5 (prestin) EMBV3_31145 ATTGAGAAGCAGCAGAAGGCGGAGGCTGAAGCTCAGAAGAAGCAGCTGGAAGCGAGTCTA Gene GeneID:516989|RALYL:NM_001077932:48_cdna UTR3_Alt 2 NULL GeneID:516989 14 GENE RALYL MGC133552 MGC143116 RALY RNA binding protein-like EMBV3_22747 GGCCGACAGTGTTACTGGGACCCCCAAAATAGAAAGTTTTGGTTTCCTTCCGGTTTTTCC Gene GeneID:505329|CRISPLD2:NM_001100299:14_cdna UTR3_Alt 2 NULL GeneID:505329 18 GENE CRISPLD2 NULL cysteine-rich secretory protein LCCL domain containing 2 EMBV3_20434 CAGCCAGGATTTTGCAGCAGCACAGTTTCATTCTCTTATCTGAACTCATACCTGGCAAAG Gene GeneID:536021|RAB28:NM_001034634:13_cdna Constitutive 1 NULL GeneID:536021 6 GENE RAB28 MGC128932 RAB28, member RAS oncogene family EMBV3_16370 GATTACTAAAGGGAAGCATTTCTGGGCCTTCCGTGTGGAGCCGTACTCATACCTGGTGAA Gene GeneID:539023|TRIM36:XM_002690428:146_cdna UTR3_Alt 2 NULL GeneID:539023 10 GENE TRIM36 NULL tripartite motif-containing 36 EMBV3_41472 CAGGATTTGCCTTGATATAGGACTTGAGCTACCAAGATCTGTGGCTTTAAGTGAACTTAC Gene GeneID:782528|TOR1AIP1:NM_001080344:245_cdna Constitutive 0 NULL GeneID:782528 16 GENE TOR1AIP1 MGC134114 torsin A interacting protein 1 EMBV3_24927 CTTCCGAGACCACACCTTTCTCTATGAAAAGCTCTATACCGGCAAGCCAGACCTGGTGAA Gene GeneID:539248|C10H14ORF1:NM_001035423:132_cdna Constitutive 0 NULL GeneID:539248 10 GENE C10H14ORF1 MGC127708 chromosome 14 open reading frame 1 ortholog EMBV3_36494 TTTGCACAGTGCTTCAGGCCAGAGAGAAGGAGACAAAAACCTGCTTCCCCCACAGCAATG Gene GeneID:100336451|LOC100336451:XM_002694661:195_cdna Constitutive 0 NULL GeneID:100336451 17 GENE LOC100336451 NULL IGL@ protein-like EMBV3_41119 ACCTTCCTCTGTGGGCTGTGGTGTTTTCAAAGGGACCTGCTGTCGCCACTTTACGATCAT Gene GeneID:522515|SGPL1:NM_001098053:332_cdna Constitutive 0 NULL GeneID:522515 28 GENE SGPL1 MGC140361 sphingosine-1-phosphate lyase 1 EMBV3_27039 CCTTACCACAGCCATGAGCAGATGCTCTCACTTCTCGTGATTCCGTGTCTTTTCATTTTG Gene GeneID:789710|KLF13:NM_001083533:145_cdna Constitutive 0 NULL GeneID:789710 21 GENE KLF13 MGC148818 Kruppel-like factor 13 EMBV3_41277 ATCCAAGAGTGTGTTAAGGCAGCATCCTATTCTACATTCCACATCTCCTATGTAACTATG Gene GeneID:527565|HACE1:XM_002690144:19_cdna Constitutive 2 NULL GeneID:527565 9 GENE HACE1 NULL HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 EMBV3_28375 GTGATGCTTTCTAAGGCCCACTTGACTTCACATTCCAAAATGTCTGGCTCTAGGTGAGTG Gene BVV0101_074412 - 1 EMBV3_17487 GK000022.2:13354415-13368972 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060488 TCONS_00087337 TCONS_00242346 TCONS_00032702 TCONS_00022769 TCONS_00238313 TCONS_00068672 TCONS_00109153 TCONS_00139137 TCONS_00201862 TCONS_00009527 TCONS_00169610 TCONS_00110353 TCONS_00109576 TCONS_00040258 TCONS_00057020 TCONS_00143074 TCONS_00178988 TCONS_00088348 TCONS_00071654 TCONS_00162464 TCONS_00199779 TCONS_00231270 TCONS_00020502 TCONS_00152742 TCONS_00079337 TCONS_00229762 TCONS_00100947 TCONS_00088966 TCONS_00130890 TCONS_00023656 TCONS_00098773 TCONS_00188826 TCONS_00006896 TCONS_00063371 TCONS_00072967 TCONS_00022463 TCONS_00111173 TCONS_00083606 TCONS_00154504 TCONS_00124653 TCONS_00126154 TCONS_00210438 TCONS_00079500 TCONS_00091936 TCONS_00016728 TCONS_00185766 TCONS_00032664 TCONS_00009790 TCONS_00060495 TCONS_00220641 TCONS_00221089 TCONS_00062027 TCONS_00031148 TCONS_00040529 TCONS_00108495 TCONS_00021496 TCONS_00039905 TCONS_00074246 TCONS_00111941 TCONS_00189124 TCONS_00057506 TCONS_00182250 TCONS_00012113 TCONS_00071985 TCONS_00000211 TCONS_00192140 TCONS_00010927 TCONS_00007786 TCONS_00229688 TCONS_00143804 TCONS_00254634 TCONS_00124753 TCONS_00175514 TCONS_00109433 TCONS_00238588 TCONS_00017325 TCONS_00189074 TCONS_00197087 TCONS_00079471 TCONS_00176206 TCONS_00047844 TCONS_00063232 TCONS_00180497 TCONS_00023639 TCONS_00232810 TCONS_00187595 TCONS_00222892 TCONS_00187311 TCONS_00197959 TCONS_00200874 TCONS_00206414 TCONS_00099649 TCONS_00200553 TCONS_00243251 TCONS_00241894 TCONS_00218277 TCONS_00221136 TCONS_00231362 TCONS_00010824 TCONS_00085917 TCONS_00054230 TCONS_00000212 TCONS_00121471 TCONS_00235437 TCONS_00131278 TCONS_00150799 TCONS_00187302 TCONS_00020299 TCONS_00039410 TCONS_00207065 TCONS_00197957 TCONS_00193501 TCONS_00218971 TCONS_00154324 TCONS_00008642 TCONS_00088346 TCONS_00139140 TCONS_00238491 TCONS_00251406 TCONS_00208876 TCONS_00177000 TCONS_00006522 TCONS_00074921 TCONS_00209084 TCONS_00058292 TCONS_00063214 TCONS_00103962 TCONS_00182252 TCONS_00081454 TCONS_00235438 TCONS_00156657 TCONS_00008734 TCONS_00224109 TCONS_00054240 TCONS_00056700 TCONS_00083608 TCONS_00253002 TCONS_00154945 TCONS_00110381 TCONS_00012055 TCONS_00040331 TCONS_00064321 TCONS_00017330 TCONS_00026461 TCONS_00147917 TCONS_00193500 TCONS_00074926 TCONS_00099433 TCONS_00122054 TCONS_00019021 TCONS_00219614 TCONS_00060493 TCONS_00209889 TCONS_00047378 TCONS_00230018 TCONS_00088276 TCONS_00149773 TCONS_00122251 TCONS_00005986 TCONS_00009850 TCONS_00224154 TCONS_00041689 TCONS_00208061 TCONS_00199409 TCONS_00121529 TCONS_00007302 TCONS_00009375 TCONS_00031593 TCONS_00250871 TCONS_00074096 TCONS_00151311 TCONS_00156592 TCONS_00142407 TCONS_00218276 TCONS_00022599 TCONS_00152775 TCONS_00182825 TCONS_00085918 TCONS_00189172 TCONS_00137108 TCONS_00221543 TCONS_00062028 TCONS_00021890 TCONS_00254894 TCONS_00140844 TCONS_00224145 TCONS_00007353 TCONS_00106695 TCONS_00233768 TCONS_00124129 TCONS_00040593 TCONS_00010407 TCONS_00090494 TCONS_00124450 TCONS_00239182 TCONS_00073939 TCONS_00016729 TCONS_00254319 TCONS_00165726 TCONS_00005899 TCONS_00131340 TCONS_00109960 TCONS_00016727 TCONS_00185777 TCONS_00175916 TCONS_00198932 TCONS_00059941 TCONS_00153323 TCONS_00019886 TCONS_00012114 TCONS_00205462 TCONS_00030888 TCONS_00083611 TCONS_00137243 TCONS_00073726 TCONS_00116868 TCONS_00180573 TCONS_00142520 TCONS_00098283 TCONS_00058116 TCONS_00182247 TCONS_00099517 TCONS_00203184 TCONS_00070783 TCONS_00122016 TCONS_00157719 TCONS_00247351 TCONS_00007513 TCONS_00197443 TCONS_00201188 TCONS_00168027 TCONS_00060496 TCONS_00042304 TCONS_00155178 TCONS_00089514 TCONS_00209311 TCONS_00007522 TCONS_00147942 TCONS_00152912 TCONS_00123385 TCONS_00057758 TCONS_00053909 TCONS_00251066 TCONS_00074381 TCONS_00249932 TCONS_00008259 TCONS_00222513 TCONS_00198856 TCONS_00131305 TCONS_00177341 TCONS_00038786 TCONS_00131141 TCONS_00139133 TCONS_00071094 TCONS_00231806 TCONS_00176771 TCONS_00021486 TCONS_00238489 TCONS_00021272 TCONS_00031427 TCONS_00062764 TCONS_00218815 TCONS_00122034 TCONS_00154276 TCONS_00199781 TCONS_00025106 TCONS_00111181 TCONS_00072626 TCONS_00220614 TCONS_00197537 TCONS_00022660 TCONS_00251352 TCONS_00032678 TCONS_00187644 TCONS_00223815 TCONS_00070115 TCONS_00126153 TCONS_00177252 TCONS_00250005 TCONS_00038668 TCONS_00071563 TCONS_00016726 TCONS_00029761 TCONS_00176171 TCONS_00017324 TCONS_00131292 TCONS_00232354 TCONS_00030353 TCONS_00062800 TCONS_00180081 TCONS_00039827 TCONS_00092660 TCONS_00175103 TCONS_00126148 TCONS_00250225 TCONS_00219991 TCONS_00161889 TCONS_00152861 TCONS_00149896 TCONS_00057483 TCONS_00110316 TCONS_00219075 TCONS_00053908 TCONS_00106694 TCONS_00230750 TCONS_00033595 TCONS_00156593 TCONS_00251933 TCONS_00239619 TCONS_00242449 TCONS_00207853 TCONS_00087257 TCONS_00243121 TCONS_00200402 TCONS_00037907 TCONS_00124848 TCONS_00231545 TCONS_00011085 TCONS_00218275 TCONS_00157220 TCONS_00240553 TCONS_00116046 TCONS_00066402 TCONS_00047461 TCONS_00079430 TCONS_00216398 TCONS_00218274 TCONS_00142098 TCONS_00187545 TCONS_00046959 TCONS_00000220 TCONS_00186785 TCONS_00117722 TCONS_00121538 TCONS_00251591 TCONS_00131331 TCONS_00107559 TCONS_00106693 TCONS_00108328 TCONS_00201052 TCONS_00168787 TCONS_00233719 TCONS_00016725 TCONS_00231737 TCONS_00078822 TCONS_00139134 TCONS_00029762 TCONS_00074923 TCONS_00174047 TCONS_00007111 TCONS_00071014 TCONS_00141382 TCONS_00126150 TCONS_00197030 TCONS_00178271 TCONS_00023659 TCONS_00060492 TCONS_00033373 TCONS_00251805 TCONS_00056889 TCONS_00091757 TCONS_00066161 TCONS_00124548 TCONS_00049295 TCONS_00098597 TCONS_00136864 TCONS_00121530 TCONS_00178365 TCONS_00176989 TCONS_00078868 TCONS_00196654 TCONS_00062030 TCONS_00137275 TCONS_00060491 TCONS_00193498 TCONS_00249379 TCONS_00201183 TCONS_00244513 TCONS_00031814 TCONS_00216429 TCONS_00197569 TCONS_00231952 TCONS_00198595 TCONS_00047643 TCONS_00142555 TCONS_00126142 TCONS_00218278 TCONS_00048090 TCONS_00139138 TCONS_00250850 TCONS_00074918 TCONS_00032866 TCONS_00253648 TCONS_00239779 TCONS_00166405 TCONS_00044804 TCONS_00212973 TCONS_00222162 TCONS_00197502 TCONS_00244519 TCONS_00200394 TCONS_00248933 TCONS_00197472 TCONS_00154208 TCONS_00122041 TCONS_00110351 TCONS_00010478 TCONS_00113431 TCONS_00107708 TCONS_00212791 TCONS_00087258 TCONS_00229705 TCONS_00187671 TCONS_00242609 TCONS_00232579 TCONS_00230779 TCONS_00231696 TCONS_00141056 TCONS_00112928 TCONS_00056972 TCONS_00032256 TCONS_00241201 TCONS_00209026 TCONS_00066197 TCONS_00139135 TCONS_00063300 TCONS_00080170 TCONS_00197353 TCONS_00074922 TCONS_00125012 TCONS_00085919 TCONS_00162467 TCONS_00019107 TCONS_00112183 TCONS_00249934 TCONS_00221751 TCONS_00221465 TCONS_00007370 TCONS_00083610 TCONS_00017658 TCONS_00107373 TCONS_00212975 TCONS_00141391 TCONS_00251765 TCONS_00250266 TCONS_00010496 TCONS_00241119 TCONS_00025135 TCONS_00200828 TCONS_00088359 TCONS_00009103 TCONS_00129731 TCONS_00218279 TCONS_00218427 TCONS_00112892 TCONS_00086569 TCONS_00010238 TCONS_00162492 TCONS_00019475 TCONS_00025243 TCONS_00022390 TCONS_00054167 TCONS_00011422 TCONS_00222321 TCONS_00073448 TCONS_00109902 TCONS_00235443 TCONS_00109822 TCONS_00083374 TCONS_00062813 TCONS_00062760 TCONS_00040497 TCONS_00209884 TCONS_00216393 TCONS_00190588 TCONS_00138043 TCONS_00157769 TCONS_00220928 TCONS_00001358 TCONS_00254911 TCONS_00239299 TCONS_00079522 TCONS_00199826 TCONS_00062758 TCONS_00064985 TCONS_00135762 TCONS_00166021 TCONS_00210080 TCONS_00031872 TCONS_00142180 TCONS_00039240 TCONS_00129697 TCONS_00198897 TCONS_00063196 TCONS_00174045 TCONS_00023496 TCONS_00066198 TCONS_00199862 TCONS_00251193 TCONS_00116491 TCONS_00186084 TCONS_00110439 TCONS_00090243 TCONS_00037771 TCONS_00254888 TCONS_00203085 TCONS_00251157 TCONS_00220658 TCONS_00250616 TCONS_00100004 TCONS_00136737 TCONS_00206563 TCONS_00233467 TCONS_00103051 TCONS_00249266 TCONS_00152757 TCONS_00206965 TCONS_00112084 TCONS_00074591 TCONS_00107767 TCONS_00108677 TCONS_00139136 TCONS_00185631 TCONS_00129690 TCONS_00252712 TCONS_00109794 TCONS_00249145 TCONS_00000219 TCONS_00176157 TCONS_00221660 TCONS_00078427 TCONS_00200361 TCONS_00115895 TCONS_00153040 TCONS_00198653 TCONS_00060497 TCONS_00182251 TCONS_00207922 TCONS_00083373 TCONS_00161829 TCONS_00224140 TCONS_00243949 TCONS_00025022 TCONS_00239740 TCONS_00135779 TCONS_00073363 TCONS_00200481 TCONS_00124596 TCONS_00090615 TCONS_00083607 TCONS_00142948 TCONS_00030261 TCONS_00219110 TCONS_00189178 TCONS_00012100 TCONS_00025136 TCONS_00143295 TCONS_00187817 TCONS_00108980 TCONS_00234231 TCONS_00229872 TCONS_00153915 TCONS_00060490 TCONS_00037665 TCONS_00139131 TCONS_00089421 TCONS_00009350 TCONS_00020727 TCONS_00115001 TCONS_00062029 TCONS_00160911 TCONS_00040676 TCONS_00100573 TCONS_00064146 TCONS_00219257 TCONS_00174046 TCONS_00126152 TCONS_00059948 TCONS_00234531 TCONS_00251733 TCONS_00129595 TCONS_00091653 TCONS_00141269 TCONS_00040374 TCONS_00152934 TCONS_00251355 TCONS_00057238 TCONS_00020069 TCONS_00175208 TCONS_00056666 TCONS_00048726 TCONS_00240081 TCONS_00154456 TCONS_00125302 TCONS_00221284 TCONS_00065262 TCONS_00021121 TCONS_00147918 TCONS_00200294 TCONS_00111450 TCONS_00223346 TCONS_00009115 TCONS_00247350 TCONS_00122302 TCONS_00199526 TCONS_00253150 TCONS_00207051 TCONS_00219856 TCONS_00207420 TCONS_00047669 TCONS_00250959 TCONS_00108256 TCONS_00179625 TCONS_00179444 TCONS_00007222 TCONS_00032222 TCONS_00244525 TCONS_00250423 TCONS_00129756 TCONS_00108035 TCONS_00238701 TCONS_00246552 TCONS_00025023 TCONS_00081014 TCONS_00234353 TCONS_00058074 TCONS_00071191 TCONS_00232761 TCONS_00139139 TCONS_00230736 TCONS_00040871 TCONS_00231651 TCONS_00188029 TCONS_00251149 TCONS_00187209 TCONS_00090481 TCONS_00248828 TCONS_00190633 TCONS_00060489 TCONS_00111818 TCONS_00108320 TCONS_00143199 TCONS_00007622 TCONS_00007010 TCONS_00080011 570 XLOC_036754 XLOC_052448 XLOC_149010 XLOC_018940 XLOC_013439 XLOC_144980 XLOC_041763 XLOC_065058 XLOC_084810 XLOC_123507 XLOC_005082 XLOC_103401 XLOC_066257 XLOC_065480 XLOC_024074 XLOC_034821 XLOC_087497 XLOC_108761 XLOC_053135 XLOC_043424 XLOC_099345 XLOC_121431 XLOC_140759 XLOC_011177 XLOC_092507 XLOC_048222 XLOC_139256 XLOC_061189 XLOC_053752 XLOC_079596 XLOC_014323 XLOC_059017 XLOC_114867 XLOC_002458 XLOC_038098 XLOC_044735 XLOC_013133 XLOC_067073 XLOC_051305 XLOC_094264 XLOC_076197 XLOC_077380 XLOC_128948 XLOC_048385 XLOC_056705 XLOC_008895 XLOC_111819 XLOC_018904 XLOC_005343 XLOC_133958 XLOC_134405 XLOC_037194 XLOC_017397 XLOC_024345 XLOC_064400 XLOC_012169 XLOC_023722 XLOC_046002 XLOC_067840 XLOC_115163 XLOC_035304 XLOC_110809 XLOC_007663 XLOC_043754 XLOC_000063 XLOC_117107 XLOC_006478 XLOC_003346 XLOC_139182 XLOC_088224 XLOC_157566 XLOC_076296 XLOC_105295 XLOC_065337 XLOC_145255 XLOC_009008 XLOC_115113 XLOC_118751 XLOC_048356 XLOC_105985 XLOC_027976 XLOC_037959 XLOC_110264 XLOC_014306 XLOC_142293 XLOC_113640 XLOC_136199 XLOC_113359 XLOC_119618 XLOC_122525 XLOC_124936 XLOC_059892 XLOC_122205 XLOC_149914 XLOC_148558 XLOC_131667 XLOC_134452 XLOC_140851 XLOC_006375 XLOC_051996 XLOC_032039 XLOC_073418 XLOC_144232 XLOC_079983 XLOC_091954 XLOC_113350 XLOC_010976 XLOC_023227 XLOC_125584 XLOC_119616 XLOC_117497 XLOC_132290 XLOC_094084 XLOC_004199 XLOC_053133 XLOC_145158 XLOC_154347 XLOC_127388 XLOC_106774 XLOC_002085 XLOC_046453 XLOC_127595 XLOC_036059 XLOC_037941 XLOC_062257 XLOC_050333 XLOC_095117 XLOC_004291 XLOC_137405 XLOC_032049 XLOC_034503 XLOC_155943 XLOC_094606 XLOC_066285 XLOC_007605 XLOC_024147 XLOC_039045 XLOC_015015 XLOC_089803 XLOC_059676 XLOC_073610 XLOC_009702 XLOC_132933 XLOC_128400 XLOC_027513 XLOC_139512 XLOC_053063 XLOC_091647 XLOC_073806 XLOC_001549 XLOC_005403 XLOC_137450 XLOC_025495 XLOC_126574 XLOC_121062 XLOC_073427 XLOC_002864 XLOC_004931 XLOC_017841 XLOC_153814 XLOC_045855 XLOC_092080 XLOC_095053 XLOC_086832 XLOC_013269 XLOC_092540 XLOC_110993 XLOC_115211 XLOC_083318 XLOC_134857 XLOC_012563 XLOC_157826 XLOC_085273 XLOC_137441 XLOC_002914 XLOC_062871 XLOC_143249 XLOC_075681 XLOC_024409 XLOC_005958 XLOC_055275 XLOC_075997 XLOC_145848 XLOC_045699 XLOC_157253 XLOC_100609 XLOC_001462 XLOC_080045 XLOC_065864 XLOC_111830 XLOC_105695 XLOC_120585 XLOC_036542 XLOC_093087 XLOC_010564 XLOC_007664 XLOC_124657 XLOC_017140 XLOC_083453 XLOC_045488 XLOC_071034 XLOC_110340 XLOC_086945 XLOC_058529 XLOC_035913 XLOC_059760 XLOC_124124 XLOC_042561 XLOC_073572 XLOC_096174 XLOC_151307 XLOC_003074 XLOC_119104 XLOC_122836 XLOC_102863 XLOC_025637 XLOC_094662 XLOC_054298 XLOC_127822 XLOC_003083 XLOC_089827 XLOC_092677 XLOC_074939 XLOC_035555 XLOC_031856 XLOC_154009 XLOC_046136 XLOC_152875 XLOC_003817 XLOC_135822 XLOC_120509 XLOC_080010 XLOC_107115 XLOC_022607 XLOC_079846 XLOC_042867 XLOC_141294 XLOC_106545 XLOC_012159 XLOC_145156 XLOC_011945 XLOC_017675 XLOC_037491 XLOC_132134 XLOC_073590 XLOC_094036 XLOC_121433 XLOC_014669 XLOC_067081 XLOC_044394 XLOC_133931 XLOC_119198 XLOC_013330 XLOC_154293 XLOC_018918 XLOC_113689 XLOC_137114 XLOC_042140 XLOC_107026 XLOC_152948 XLOC_022491 XLOC_043333 XLOC_016019 XLOC_105950 XLOC_079997 XLOC_141839 XLOC_016606 XLOC_037527 XLOC_109851 XLOC_023644 XLOC_056947 XLOC_104886 XLOC_153168 XLOC_133308 XLOC_098774 XLOC_092626 XLOC_091762 XLOC_035281 XLOC_066220 XLOC_132394 XLOC_140240 XLOC_019828 XLOC_154874 XLOC_146284 XLOC_149113 XLOC_126368 XLOC_052422 XLOC_149784 XLOC_122054 XLOC_021736 XLOC_076391 XLOC_141033 XLOC_006636 XLOC_095679 XLOC_147217 XLOC_070215 XLOC_041116 XLOC_027595 XLOC_048315 XLOC_131229 XLOC_086525 XLOC_113590 XLOC_027096 XLOC_112837 XLOC_071888 XLOC_154532 XLOC_080036 XLOC_063469 XLOC_064236 XLOC_122702 XLOC_103183 XLOC_143200 XLOC_141225 XLOC_047709 XLOC_104507 XLOC_002673 XLOC_042787 XLOC_085810 XLOC_118695 XLOC_108044 XLOC_014326 XLOC_019606 XLOC_154746 XLOC_034692 XLOC_056529 XLOC_040878 XLOC_076094 XLOC_029426 XLOC_058842 XLOC_083075 XLOC_108138 XLOC_106763 XLOC_047753 XLOC_118400 XLOC_083485 XLOC_152322 XLOC_122831 XLOC_150485 XLOC_018059 XLOC_131237 XLOC_119230 XLOC_141440 XLOC_120249 XLOC_027775 XLOC_086980 XLOC_028222 XLOC_153793 XLOC_019102 XLOC_156587 XLOC_146444 XLOC_101243 XLOC_026271 XLOC_130297 XLOC_135471 XLOC_119163 XLOC_122046 XLOC_151876 XLOC_119133 XLOC_093969 XLOC_073597 XLOC_066255 XLOC_006029 XLOC_069031 XLOC_063618 XLOC_130256 XLOC_139199 XLOC_113716 XLOC_149272 XLOC_142064 XLOC_140269 XLOC_141184 XLOC_085484 XLOC_068823 XLOC_034775 XLOC_018496 XLOC_147865 XLOC_127537 XLOC_040914 XLOC_038027 XLOC_049054 XLOC_119014 XLOC_076555 XLOC_099348 XLOC_009787 XLOC_068080 XLOC_152877 XLOC_135063 XLOC_134779 XLOC_002931 XLOC_009078 XLOC_063283 XLOC_085819 XLOC_154706 XLOC_153209 XLOC_006047 XLOC_147783 XLOC_014679 XLOC_122479 XLOC_053146 XLOC_004659 XLOC_078444 XLOC_131747 XLOC_068787 XLOC_052184 XLOC_005790 XLOC_099373 XLOC_010154 XLOC_014707 XLOC_013060 XLOC_031976 XLOC_006973 XLOC_135630 XLOC_045213 XLOC_065806 XLOC_065726 XLOC_051245 XLOC_037540 XLOC_037487 XLOC_024313 XLOC_128395 XLOC_116623 XLOC_084252 XLOC_096224 XLOC_134244 XLOC_000334 XLOC_157843 XLOC_145965 XLOC_048407 XLOC_121478 XLOC_037485 XLOC_039709 XLOC_081985 XLOC_100861 XLOC_128591 XLOC_018117 XLOC_086605 XLOC_023058 XLOC_078410 XLOC_120550 XLOC_037923 XLOC_014163 XLOC_121514 XLOC_154136 XLOC_070658 XLOC_112137 XLOC_066343 XLOC_055024 XLOC_021600 XLOC_157820 XLOC_124102 XLOC_154100 XLOC_133975 XLOC_153559 XLOC_060247 XLOC_082948 XLOC_125085 XLOC_142949 XLOC_062002 XLOC_152209 XLOC_092522 XLOC_125485 XLOC_067981 XLOC_046345 XLOC_063677 XLOC_064582 XLOC_111684 XLOC_078403 XLOC_155653 XLOC_065698 XLOC_152088 XLOC_105936 XLOC_134973 XLOC_047315 XLOC_122013 XLOC_070064 XLOC_092805 XLOC_120307 XLOC_126437 XLOC_098714 XLOC_137436 XLOC_150314 XLOC_014641 XLOC_146405 XLOC_082002 XLOC_045128 XLOC_122133 XLOC_076140 XLOC_055395 XLOC_087373 XLOC_016515 XLOC_132429 XLOC_115217 XLOC_007650 XLOC_087717 XLOC_113860 XLOC_064885 XLOC_143710 XLOC_139366 XLOC_093677 XLOC_021495 XLOC_054206 XLOC_004906 XLOC_011402 XLOC_069415 XLOC_097804 XLOC_024492 XLOC_060815 XLOC_038872 XLOC_132576 XLOC_144009 XLOC_154674 XLOC_078308 XLOC_056426 XLOC_085697 XLOC_024190 XLOC_092699 XLOC_154296 XLOC_035037 XLOC_010747 XLOC_104991 XLOC_034469 XLOC_028857 XLOC_146746 XLOC_094216 XLOC_076844 XLOC_134600 XLOC_039983 XLOC_011794 XLOC_121946 XLOC_067350 XLOC_136647 XLOC_004671 XLOC_073857 XLOC_121179 XLOC_156091 XLOC_125570 XLOC_133173 XLOC_125936 XLOC_027801 XLOC_153902 XLOC_064164 XLOC_109397 XLOC_109217 XLOC_002784 XLOC_018463 XLOC_153366 XLOC_078469 XLOC_063945 XLOC_145368 XLOC_151020 XLOC_049896 XLOC_143831 XLOC_035871 XLOC_042963 XLOC_142245 XLOC_140226 XLOC_024685 XLOC_141139 XLOC_114072 XLOC_154092 XLOC_113257 XLOC_055262 XLOC_151771 XLOC_116668 XLOC_067718 XLOC_064228 XLOC_087621 XLOC_003183 XLOC_002572 XLOC_048895 Coding TCONS_00174046 XLOC_104507 Coding Coding ACOT11 3:92272943-92301505 j TSS129250 2521 3 TCONS_00174046_1 173 0.621975406584689 6 0.911942859143587 0.00313852133306947 0.00241231307203616 0.00230883940516261 0.00159272568936213 0.00165674058503331 0.00100103160310711 0.00134173782270352 0.0012934930535564 0.00180587561802444 0.0026758852678101 0.00171937966131285 0.00160249265132579 0.000709789345247976 0.00254066937106549 0.00190086311249893 0.0184614017106363 0.00807425195500976 0.0153722935871053 0.00358905129998192 0.00352117986384747 0.0015838623582098 0.00702937393908806 0.00496394307860696 0.00695674420836092 0.00286775024648844 0.00389072437791536 0.00373749856577436 0.00284008752174211 0.00233302416593925 0.00532492302341169 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 4475 100.00 0.983736612455375 XM_005270732.1 ACOT11 PREDICTED: Homo sapiens acyl-CoA thioesterase 11 (ACOT11), 0.0 774 90.05 0.225704085680286 TCONS_00174046_1 sp|Q8VHQ9|ACO11_MOUSE ACO11_MOUSE Acyl-coenzyme A thioesterase 11; 1e-108 327 92.26 0.965317919075145 1 coding 0 0 0 0 -0.00915018249092775 0.944016596621234 -0.0217543626755451 0.647572856388768 GCCTCAGATTTACAGCATACTTCAGGGCTGAGCCAAACCAGGGCCTGGCCTCCGTGTTCTCCAACCGCACGTCCCGGAAGTCGGCCTCACGCACTGACAGCGACAACATGGCAGATGGCGAGGGCTACCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGTGCTGCCCTGCCACACCAACCAGCGTGGCGAGCTGAGCGTCGGGCAGCTGCTCAAGTGGATCGACGCCACCGCCTGCCTGTCCGCGGAGAGGCATGCAGGGTGCCCCTGTGTCACAGCCTCCATGGATGACATCTATTTTGAGCACACCATTAGTGTTGGACAAGTTGTGAATATCAAGGCCAAGGTGAACCGAGCCTTCAACTCTAGCATGGAGGTGGGCATCCAGGTGGTCTCCGAGGACCTGTGCTCTGAGAAGCAGTGGTGTGTGTGCAAGGCCTTAGCCACCTTCGTGGCCCACAGGGAGCTCTCCAAGGTGAAGCTGAAGCCAACTGTGCCTCGGACCGAAGAGGAAAAGACGGAGCACAGTGTGGCGGCCGAGCGCCGGCGCATGCGACTGGTCTACGCAGACACCATTAAGGACCTCCTCGCCAACTGCGTCATTCAGGATGGTGAGCGTCATGGGTAGGGAGGGCAGCTCGTGTCCTACATGCTCCCCTCTGTCTGGGGCTCCTACTGGGCAGAGAAAGGAAGGAAGTCTCCCTGGAATATCCACCCAGTGATGGCCTCAGGCCTGGATAACACTCTTGCCTCAAGGTCCCTTAGTGGGGAAAAGGGAGCATTTGGACCTCTCGCCCAGCTCCCAGGAGCCATGAAGATGAAGCTGGGACACATAGAAAACAGTTTGTCATCCACTAAATGCATTTGGGTCTCTAGGAGTCAAGGTATTTGGGAAGGTAGTATTGAGCTTGGCCTTGAGGACCCTCAGTTCAGTCGCTCAGTCATGTGCAACTCTTTGCGACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAGCTCCTGGAGTTCACCCAAACTCATGTCCATCGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTTGTTCCCTTCTCCTCCTGCCCCTAATCTCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCCCATGAGATGGCCAAAGTATTAGAGTTTCAGCTTTAGCATCAGTCCTTCCAAAGAACACCCAGGACTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACTACAGTTCAAAAGCATCAATTCTTCGGCACTCAGCCTTCTTCACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCCTTCCAAGGAATAAGCATCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCCAAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCTATGAAGTGATGGGACCAGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTCACCTTCATCAAGAGGCTTTTTAGTTCCTTTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATAGTCCTCCCGGCAATCTTTATTCCAGCTTATGCTTCCTCCAGCCCAGCGTTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAACATACAGCCTTGACGTACTCCTTTTCCTATTTGGAACCAGTCTCTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATATAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGATATTCCCATCTCTTTCAGAATTTTCCACAGTTTCTTGTAATCCACACAGTCAAAGGCTTTGGCATAGTCGAGAAAGCAGAAATAGATGTTTTTCTTGAACTCTCTTGCTTTTTCCATGATCCAGTGGATGTTGGCAATTTCGTCTCTGGTTCCTCTGCCTTTTCTAAAACCAGTTTGAACATCAGGAAGTTCACGGTTCACGTATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCAGTCGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGAAATGAAAACTGACCTTTTCCAGTCCTGTGACTACTGCTGAGTTTTCCAAATGTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCGTCATCTTCTAGGATTTGAAATAGTTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTTGTAGTGATGCTTTCTAAGGCCTACTTGACTTCACATTCCAGGTTGTCTGGCTCTAGGTGAGTGATCACACCATCATGATTATCTTGGTCATGAAGATCTTTTTAGGACTTAAAAAAAAAAAAAAAA EMBV3_25614 GACTAAGGGCGACTGCGACGCCAGGTGCATTCTCTTCACCTCCTGTTTTCAGTACAAACT Gene BVT0101_031167 + 0 NULL GK000029.2:46862301-46913940 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22289 AAGTTGCTTTGAAGGTCCTTTGGAGGCCGGACCGGGTCTTGAACCAGGGAAGGGAATAAA Gene GeneID:539492|SIX2:XM_002691303:415_cdna Constitutive 0 NULL GeneID:539492 11 GENE SIX2 NULL SIX homeobox 2 EMBV3_14596 CCATTGTCCAGCGGGCTGTGAGTCTTGAGGTTCTTGTGTCGGGGACGGCTCTCGTGTTCA Gene GeneID:617174|ZNF8:NM_001098470:64_cdna Constitutive 0 NULL GeneID:617174 18 GENE ZNF8 NULL zinc finger protein 8 EMBV3_16704 GGAGCGTCCTGGGGATCGCCCCGCGCGCAGGTCCAGCGTCGGAAGTGGAAGCTACAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25282 AGCGCAGTGACCTACCTGGCAGCCGCCAAGGCGGTGGCGGTCCCCAGCCCGAGGATGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27821 TCCCTGGCTCACCTCCCCATCAGTATGCAAGTCTCCTGTGCTAAACCAGCTCTTGACTAT Gene GeneID:100139916|LOC100139916:XM_002697870:399_cdna Constitutive 0 NULL GeneID:100139916 25 GENE LOC100139916 NULL similar to interleukin 32 EMBV3_15465 ACAAAGAGTGTTTGCTTTCAGATGCCATGGGTTACACTTTTATGGGCATGACTATAACCA Gene GeneID:616182|SMAP:NM_001035474:234_cdna Constitutive 3 NULL GeneID:616182 15 GENE SMAP MGC128249 small acidic protein EMBV3_14190 TCACTCGTGCCGAAGGCATTAGATGGCTAAATAACTGACATGTCCACTGGACCTTCTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16005 GAGACCTTGACAACACAGACACTACTTCTAACTGGCAAGCCATGGAACTGTAGCACCTGG Gene GeneID:785612|GTF2A1:XM_002691104:11_cdna Constitutive 0 NULL GeneID:785612 10 GENE GTF2A1 NULL general transcription factor IIA, 1, 19/37kDa EMBV3_06041 GTGAGTACCAGTGAAGGTCCCATCTGAAGGCCCGTACATAGTCGTTATACTAACACAACC Gene BVV0101_036700 + 0 NULL GK000007.2:15472605-15480825 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215606 TCONS_00215607 TCONS_00215608 TCONS_00215605 1 XLOC_131017 Coding TCONS_00215606 XLOC_131017 Coding Coding LOC100335642 7:15473444-15490245 j TSS160997 8333 1 TCONS_00215606_1 149 0.483259330373215 6 0.504345238095238 2.1757189461466e-13 2.52173167618502e-06 6.28093581943302e-14 1.44173869483817e-05 4.53567066973515e-14 8.39798330276427e-08 1.75107791699623e-05 4.08628199459757e-05 8.95165343659234e-06 9.39563724829856e-05 1.34940367427637e-05 0.000102236032051067 6.72223018646262e-05 1.71170705592015e-05 0.000585609878296528 0.00140766156742923 0.000964855279124434 0.000457515882403089 8.86314527598752e-14 2.86531811337238e-14 2.03119762337431e-06 0.000501976190672213 6.24478084542286e-08 0.000474460003650761 6.31320196434734e-14 1.15272760205654e-06 0 2.11310362777896e-11 1.63776078401649e-05 9.0707586193159e-05 XM_002704784.2 LOC100335642 PREDICTED: Bos taurus zinc finger protein 177-like (LOC100335642), 0.0 2342 100.00 0.155646225849034 NM_003451.2 ZNF177 Homo sapiens zinc finger protein 177 (ZNF177), transcript variant 3e-56 226 72.88 0.047401896075843 TCONS_00215606_1 sp|Q13360|ZN177_HUMAN ZN177_HUMAN Zinc finger protein 177; 2e-35 130 50.34 0.959731543624161 1 coding 0 0 0 0 -0.018076836203499 0.904650172488675 0.021437913913067 0.68288075024392 CCACAGACAGAAAAGCCTGGCGGGCTACAGTCCATGGGGTCACAAAGAATTGGACACGACTGAGCGACTAATACACAAGGCTGAATAATATTCAATTCTGTACCTGCTCAGGATCCCACCTGTCACCAGCAGGGGAATGTGGAGGAGGAAGCAATGGCTGCAGAGCTGCCAACAGCCTGGTCAGAGGACCCAGTAACCTTCGAGGAAGTGTCAGTGGACTTCTCCCAGGAGGAGTGGGCCCAGCTGGCCCCCGCTCAAAAAATTCTGTACCAAGATGTGATGCTGGAGAACTACAGGAACCTGACTTCTGTGGGGTATCATCTCCGCAAACCCCGCCTGCTCACCCAGGAGGAGCTGAGAACACGGAAGAGGAGACTTCTCCAAGACATCTGTGCAGACCAGAATTCTCAGCTTAAAACCAAAGAGACCACGGCTGAGAGGAATAAAGTGTGGGAAAAACCATTTACTGGCAGGAAAGGGGTACCAACTCAACCTGGAAAGAAGTCCCATGAACACAGTCTGTGTGGAAAAGCCATCAGAAGAAATCCTGACCTGACTACTAAGAGGAATTACACAGGTGTGAAACGTGATGAATGTAAATAATGTGGGGAAGTATTTAGTTATCCTTCCTTCCTTGGGGTCCACGTGCGATCACATGCTGGTGAGAAAACCTACAAATGTTCTCAGTGTGGGAAGGCTTTCAGTTGCAACTCCTTTCTCGGGCCGAACGTGTTAACTCATCCTGGAGAGGAACTGTGTCTAAGTGTAGCTAGTGTGGACAGATCTTCAGCTCTACCTCGAGCCTTGCTGTACCCAAGAGGATGCACACTTGGGAGAAGCTGTATGAATGCAGTGACTGTGGGAAGGCCTTCGGCAGGAGCAGTGACCTGACAGTGCATAAGAGAGTACACATGGGAGAAATGCCACCAGTGCAGTGACTGCGGCAAAACCTCTAGCAGAAAGTTCTTTCTGATGGCACACGTGAGAACCCATACTGGGGAGAAGCCCTACCCATTCAGTGACTGCAGAAAAGCCTTCCATAAGAGCTCTAAGGCAACTGCCCACAAGAGGCTACATGCAAGAGGGAAGACGTAGCAGTGTCGGAAGCTTTCCAGTCATTCATCACGTAGGAAACACGTGAGGATGCACACTGAAGACAAGTCTGGGAGTGGAAGCAGAGAAAGGCTCATCGATCCCACAGGAGAGCAACTGTGAATAGCTTTGGTATGGGGGGAATCCTGCTGGGGCTTAAACTACTGCACAAGGAAATTCAGAGTGGCAGAGAAAACATATAAACGTGAAGAATGTGGGTTTGCTTTTATTAGGTCCTATCTTGAAGCTGGAAATCTAGCTCATTAATTTTCAGTCTGTGTTTTTGAATTTAAGCAGTTAAGGCCATAGATATCCTGCTAAATACCCCATTTGGCTACATTACATGTGTGTGTGCTCAGTCCTGAAGCTGTGTCTGACTCTTTGCCACCCTAGGACTGTAGCCCTCCAGGCTCCTCTCTTCATGGGGTTTTCCAGGCAAAAATACTGGAGTGGATTGCTATCTCCAGGGGATCTTCCTGACTCAGGAATCAAACCTGCGTCTCCTGCATTGGCAGGTAGAGTCTTCACCACTGAGCCACCAGTTGAACTTGCACATGGGTTTTGAGCTAAGGTTTTTAAAACTTTGGTTTAGTTCTAAGTGTCATCTGATATATCTGTTAGACCTGTTTTAACTCAGTGTCACTTTTTAAGCCTATCAAAATACTACTTCACTTGAATTTCATCCAAACTCTTTCCTTCCCCCCAATCTTCTAATATCCCTATGTCTTCCGTGGTTTGGTGGGACACCTGGTGGTTCCTCAGGTATGTCGTTTCCTCTGTAACAAGTTGGTAAATCCAACTTTGTCAGACTATAGGTTTTGTCCCTGGTGGTCTTTGGCTGATTTGTGTTGGGACAATAATGTGTAGTCACATTATTATTCTATTATATAGAATACACTCTACTAGTTATGAGAATATATTTAGATTCTTGTCTTCTAAAATGTTCCTAAAACACCCTTCTAAAATGTCTTCTAAGCTGTTTTCCTATCCATTGTTGATTTTTATTTATGGTGTCAGGTTTTGTTGTTCAGTCGCTAAGTCGAACATAATTTCTGTTCAAACTTGGGAGATGAACTCCAGGAAATGGAATTTTGTGCTAATAGTTGAACGACAGTTTTTTAAACATCTCTGTTCCCCTATCTCCAAGACCAAGAAAAGAAATCTTTAAATGTATTTTTCATGCAGACAGCTGTTTCTTTGAATCTCTCTCTGGAGAATGATGTTTAATTTTATAATTCTGTCTGAAAACTTACCTTGCATGTAAAATGTACCATTTTAAATGTACAGGTTGATGAAATTTGACCAGTGTGTAAACCCCTATAATCACCACCTGAATTAGGATATAAAACATTACCATCTTCCCAGAAAGAATAACATTGATTTTGCCCATCATTAAGAAAGCTGTAAACTGTGGAAACGAAAATGCTTTTGTGTTCCATAATAAAAGCAATTTGACAGGGAAAAAAAAATTCCCTGGTGGAAATTTCCAGTGGGTAGGACTCCATGCTTTACTGCAGGAGGTGCATGTTCTATCCCTATTTGGGGAACTTAAGATCCCGCAAGCTGCCTAGCAGCAAAAAACAACAAAAACCCTCAAAAAACAACATGACTTTAAGCCTGGCAGTGTAACCTGAGCAGACAGCCTAGAAGCATGTGTGATGTGCCTCATCACACATGCCCGCATCACACGACGTGATGTCCTTCTCAATGCCCTAATCAAGAGCTTTGCACATGACTCTAAACACCTTAAAGCAGTTGCGTTGGGGGTTAATTTGCAGGGCAGATTTACTGTTCTAGCTTAGGCCCGTCTGATGTATTTCTTTCTCAGCCCTTCAAAACAATAGGGTTTTAAAAAATTGTATATTTAAATTTATTTATTTGGCTGTGCCAAGTCTTCGTTGTGATACATGTGATCAGGTTCCCCAACCAGGGATCAAACCCAGGCTGCCTGCATAGGGAGCACAGAGTCTTAATCCCTGGACCATCAGGGTAAGTCCCCCCGCACACACACTAGTTTAACTCTTTGTATTTTGTGCATATTTCTAAATCTACACTTTAAGACAGAGGTCTGCAAACTTTTTTGGTAAATGGGGAGCTATTAAATATTTTTGATTTGGTGGGCCAGATGATCTCTGTTACAACTACTCAGCTCTACCATGTGGCACAAAAGTGGTCACAGAAAATACATAAATAAACAGGTGTGGCTGTGCACCATCAAAACTATACAAAAACAGAAGCCAGGCTGGCTTATCCTTATTTTAAGGCAGAAGTTGTATTAAGAAAGAGGAAAAGGAGACTCGTGCTTTCAAAAAGCACTGAACCTTATTGGCTTATTTATTATTAAAAAAACAAAACACATGCAGAACTTTGAAGTGTGGACACTGGATCCTCAATATGTAAGAAACTGGGAATTTCCTGACGGTCCAGTCGTTAGGACTTGGCGCTTTCACTGCAGTGATTCCGCGTTCAGTCCCTGGTTGGGGAACTAAGATCCCACAAGCTGAGAGGCCTGGCCAAAAGTTAAAAATATTAAAAAAAATTAATTTCGATGGACAAATGTAATCTTGAGGGAAAAGGGGAACTAGGAAATGCTGCTTCCAAAGTTCAGAGAACACACATTGTTGGTGGGACCCTAAAGTGGTGTTGGTCGTAACAGAAAACTACTTGACCCCCAAGAGAAATCAAAAGCTGTTCAGACTTGTGCACAAGTGTTCATAACATGTGTCATGATAGCCAGAAAGAGAAAACCCCAAATTTCCCTTTGGGGAATTGGAGAATGGATTAATAAAATATAGTTAACTATACAATGAAATATTATTTGGCCATACAAATAAATGAAGTTTTTTTTTTTTCTCTCAATTTTTTAACTGTGCCATGCAGCATGTGGGATCTTAGTTCCCCAGCTGGGGATAGAACTTGTGCAGTGGAAGCTTGGTGTCTTAACCACTTGACCACCAGGGAAGTCACAGAAAGGAATGAACCTCGCCAAACATGCTCAGTGAATGAAACCAGTCACAAAGCACCACAGACTGTACTATCCCATTTATGTGACATACCCAGATTAGGCAGAGAAGCCATAGAAACATAGAGTAGGTCCATTTTTGCCTGGGCTGGTGGGGAGAACCCAGTGAACTGTGCAGGCATGAGGGATCTTACTGGGGTAATGGAAATGTTCTAAAACTGGTTCATGCTGATAGCTGCACAGTGTGATGAATGTGAACGTGGAGTCAGTCGTGTCTGACTCTTTGTGACCCCATGGACTGTAGCCTACAAGGCTCCTCTGTCCATGGGATTTTCCAGGCAATCGTACTGGAGTGGATTGCCATTTCCTTCTCCAAGGGATCTTCCCAACCCAGGGATCGAACCCGGGTCTCCCGCATTGTAGACAGACCACTAAAAATCATTTGAGCGGTACATTTCAAATGTGTGAGTTTTATAGTATGTAAGTGATACCCCACTAAAGTTGTTTTAAAAGGTTCTTCCAATGTGCATTCATTTTGGTAAACATAGCTACCGTCTTCATCATGGCAGGATAGACCCATAATACTATTTTGAAGTCATCTTGTAATTGTGGCATTCCTTGGAGAGGACAGTCACGGTCTTGTTTTCTCAAATGCTGGCATTCAGTTGTTAATGAATCTTTTTTAGATTGAATGAATGATCTAAAGAGGGCAACACTCTTTAACTCATTTATTGGGGTTCAGTTGGGGGTATTTATCTTGGCAGTGTCATCTTTTCTTTCAGGGTCTTCTTCCTTTTAACCCACAGTTTCCATGCTACACTTTTGATTCTTTTCCTTTGTTATTTAGAAGTCTTTTTGGACTTTTTGTGAGAAATGGCATGGTTTTCTTTCCTAGAATACTTCACAGGGTATTTCTGGAGAAGACCTAGAGGTATATGTATCTTGCTGGTCCTCATAGAGTTCTCTTTGTTGAGCCTATTCATAGCAAATTGGATATACTCCTTCCTGTCTAATAACTGATGGGTAGATCGTTGGGGGGATTTCTACAGATAATCATATCTATATATACAGACAGATTTCATTTGCTCCTTTTAAATTCTTACCACTTTCTTATGCTCTTGTTGCTCTTATGCTCTCTGGCAGCGGCTTTTGAATCATATTGATTAGAAGGGGCCTTCTGCACCCTGGTCTTCTTCCTGATCTTAAAGGGCATTGTGTTCCTATCGTATCAAAGTGTTATCTGCTGTTACATTTTGGTGGATGACTTTATCAGGATGAGAAAGTTGCCTTCTCTTCCTAGGGCATTAGTGTTCTTTCTTATGAACAGGCATTGCATTTTTTTTTTACAAAATCAAATGTCTGTTCTGCATCTCGTGAGATGATAGTATTTGTTCATTGACGTATTTCAAAACCCCTGGAACAAGGGTAGAACTCATAGCAGGCACTCAATAAGTATTTGTTGAATGAATGAATGAATACAGGTAGCTTTTTCTTTTGTTTTTTTAACATGTCTGTGTGGCAAATGAATTGACTCTTCTACTGTGCTATTAACCTTGGATTCCTGGGTAACTCTGCCCTCTCATATCTACTACACAGCACTGTTCCTAGTTTGCTAGCTAGGATTTTTGCATCTTTGAGTGACACCAAATTGCAAATTTTCCTTTGTCATGCTGTTCTTTTGTTGGGATATGCCAGCCTCATAAAGTTAGTTGGGGAAAGTCCCTCAAAGTCCATGCCTTCATTCACCAATTATCAACTTTTTTTTTGGACAACTGTTTTATGTTTTCTCTCCTTATGTATGTCCGACTTATTGTGATCCTATGGGCTGTATAGCCTGTCAGGCTTCTCTGTCCATGGGATTTTTCAGGCAAGAATACTGGAGTGGGTAGCCTTCCCTTCTCCAGGGGATCTTCCCCACCCAGGGATTGAACCCAGGTCTCCTGTGTTACAGGTAGATTCTTTACCATCTGAGCCACCAGGGAACCCCCCTTTCTTTTTTTAATGGGTGAGCCATTACAAACATAAGATTTCTTTAGCATTCATCCTAAGAACCAGGATATTGTCAAAAAATAAAAAGATCTTCCCTACTTCCAGGCTGATCGTTAGCCTGCCACAGTTTCATGGACGTTGGCCAGAGACACCAGATTTCTGGGTCAGAGACCAAGGGCTTTATTAACAATGCAGGAGGCAACAGATGCTTCACGTTCCTGTTGATTCTCCTGGACTCCCAAGTTGCACAGGGATGATGTAAAATGGCCCATGTGGATGCTACTCATGGAGTCAGTTTGTGTCACAGCTCAGGAACCCCAGCTCATTTTCTAATGAGCTGTAAACAAATCTGCCCCATCTTTGCCCGGGAGGGACTTTAACTTTAGGACACTGGACTGCAAACATACCTGCCCTCTGCTCCGAGGATGTCTGGTCTATAAACATCCTCAAGGACACAGTGCAGAACAGAGCAAGACATGTGGAAATGTGAGTTAGCCCATGGAGAACTATCTTCCAATGGACATTTCCTCTATAATCAAAATATAATGAATGCACATATGAAATTTAACATGGATAAAATGTTAGCGCACACAACCTCTAATCAAATTTCTCCCCACAAATATCCTTTCTTGAGGATTCAAAATATAATTTAATTTTTAAGTTATTTTTTTTAAAAAACCTTAGGAATTCATTGGTGGTCCACTGTTTAGGGCTCTGTACTCTGCCAAGGGGCCTACTGGGTTCAATCCCTGGTCTGGGAACTAAGATTCCACAAGCTGCGAGATGCAGCCGAAAAAAAGCAAAAAACTTACATAACAAGTCCTGGGAAAATAGACACTTAAATATAGCCTTCTGACAAAAGTGACTGTATTCAACCCAGAAGAATCGGGTAGGACAGGAACTGGATGCCTGTACAGAAAACTGTCATTTTTTTTTTTTTCCCATAGAAGTTGTGAAAGCCCTCGTGAGCACCCATCCTTCTGTGTCATATGGAAGGACAAATAGAGAATGGTTGTGTTAGTATAACGACTATGTACGGGCCTTCAGATGGGACCTTCACTGGTATTCACAAGAGAACTCATTTTGAGAGAGGGGTTCTGTCAGTGTTACGAATGTGGATTTGACTTTATGCTACATTTTTTTTTTAAATTATTGAAGTAAATATGATTTACGATGTTGTGTTAGTTTCAGGTGTACAGCAAAGTGATTCAGTTATATGTGCCTGTATATATTGTTTCCAGATTCTTTTCCCTTCTAGACATAGTTCCCAATGCTGCATTTTTTATGTGGACCCCGAGTTCATTGGCTTCTTGGCTTTTCCTTGTGTAATATAAATACGCAAGGCCACATATATCACTCTAAATGCCCTCCAAGTTATTCAACAAGTTGTGATAGGTGATCTTTTTACTTATTGTGGTTCAGTTCTAAATACTGTATTATTTCCATTTTAAAAGCCCCTGAGACACATGGGTTATTCAGGAATATGTCTTCTAGATGCAGTGCTGGGGTTTCTCGGTTGCCTTGTTTTTCATTTCCATTCTAGTTGTTTGTGATTGGAGGCAGTGACCTGTAGGATGTGGAACCTCTGGCATCTGTTGGGACTTTACGGGCCCAGTGTAGCACACGTTGCTCTGTGTCCATTCTTGCCACTTCCTACTATCACAACCTGGATTTTGCTCAACTTGTTAAATGTTAGTAAAACAAAAAACAGAAAACCCAGCTTGCTCTGTCTTTCTTTTTTAAAATTATTTATCACTGGATATGTTAGGTCTTTGTTGCTGCATACAGGATTTCGGTAGCTGGGGTGAGCAGGGGCTGCTTTCTCTTATGATGCACAGGCCTCTTATTGTGCTGGCTTCTCTTGTGGAAAACAGGCTCTAGGTGCACGGGCTTCAGTTGTTGTGGTGCAGAGGCCCAGTTGCTCCGCAGCATATGGGATCTTCCTGGGCTAGGGATCGAACCCATGTCTCCTGCATTGGCAGGCAGATTATTATCCACTGAGCCACCAGGAAAGTCCCTCCCCATCTTTCTTGAAGGAATGCCTCACAGCCCTGGCACATGGCAGAGAGGCAGAGCCACTGGTGTGATTTCTAGGAAAGCCGTTGAAAAGGGGACAATCCCATGTTTGTTATCTTACTTTCTTTCTCCTTGGTACTTCCTCCCTCTTTCTGCCTGGAAAGTAAATACAGTGCCAGGGACTGGAAGAAGGTAACCAGTAGGCAGAAGCCACCGGCAAAGATGGTGATGCCAGAACACAAGGCTTCCTTGCTTCTCAGCAGTTTCTCTGAGT EMBV3_37845 ATCGTGTGCTACCTGAGCCTGCCCCACCTGATGAGAAGAATGGGATTCCCAACAGCCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36388 AGTTGAGCACTCGGTCCCCAAAAGGCAGAGTGAACACTGACTCGGAAACTGCTGTTGTCA Variant GeneID:539650|IGF2BP3:XM_002686716:65_cdna 576^676 3 EMBV3_17520 GeneID:539650 4 GENE IGF2BP3 NULL insulin-like growth factor 2 mRNA binding protein 3 EMBV3_31755 CTCTTCCCTTCAACGCGATGGAGACTCCGAAGCATTCTTCTCTCTGCTGTGCCAAAGCTG Gene GeneID:534599|OGDH:NM_001076030:49_cdna Constitutive 0 NULL GeneID:534599 4 GENE OGDH MGC137985 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) EMBV3_09351 TCGGCTCCAGCCGGGGCGGCGTGCGCGGCGTTCTGGGTCTTGGGAGCTCCAGTGGCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31770 GTGCTTGCCCGGATTCTTAGTTTGGAAAAGCTATCACGTGATCCAAACAACCAGAAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09974 CAGTATCTTTGCACAAACCAGGGGTTGGGGAGGGTCTCTGGCTTTATTTTTCTGCTGTGC Gene GeneID:518795|SOCS1:XM_002697964:686_cdna Constitutive 0 NULL GeneID:518795 25 GENE SOCS1 NULL suppressor of cytokine signaling 1 EMBV3_38158 AAGTCAGGACAGCCCTCCGAAACAGCAAAGCCACAGAAGACAGTAGTGATAAACTTGACC Gene BVT0102_089277 + 0 NULL GK000019.2:53953048-53978215 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09707 AGACAAGAACTGTCTCCCTGAAGTCTGAGTGTGTTGAATCCCTGTCCTCTGGCTGCGAGT Gene GeneID:506131|CTPS:NM_001077858:77_cdna Constitutive 0 NULL GeneID:506131 3 GENE CTPS MGC152094 CTP synthase EMBV3_17226 CCCATCTTTTTCTTTCCCTCAGATTAGAGTTAGATCTTAGAATGTGGAATGAAGAACTTT Gene GeneID:506367|FAM124B:NM_001101870:64_cdna Constitutive 2 NULL GeneID:506367 2 GENE FAM124B MGC160014 Protein FAM124B EMBV3_09333 GTGGGAACTGTGGCTGATCACTGGCGATGGAGAGCGGGCTGAGCATTTCTTTGTAAAACT Gene GeneID:539525|RUNDC1:XM_002696002:400_cdna Constitutive 0 NULL GeneID:539525 19 GENE RUNDC1 NULL RUN domain containing 1 EMBV3_39718 AGAGAGACTCATTTCTCCTCGGCCCTTGTCCTGAGCTGCGTTTCAACAGACCACCAATAC Gene GeneID:519969|MEPCE:NM_001080283:206_cdna Constitutive 0 NULL GeneID:519969 25 GENE MEPCE BCDIN3 methylphosphate capping enzyme EMBV3_30763 ATGAAGGAGTTGGCTGGCATACCGAAGGCTCACACACATACGGATACAACGATATTGGCC Gene GeneID:532575|PGLYRP3:XM_002686004:373_cdna Constitutive 1 NULL GeneID:532575 3 GENE PGLYRP3 NULL peptidoglycan recognition protein 3 EMBV3_22863 ACACACGACTGTTCCCGATCCGGTTATCTGGTTTAGCAGAGTTTGTTGTGGTTTTCGAGG Gene BVT0102_121797 + 1 EMBV3_42259 GK000011.2:88587165-88739564 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033602 1 XLOC_019835 NonCoding TCONS_00033602 XLOC_019835 NonCoding NonCoding - 11:88590484-88591189 - TSS24601 705 1 TCONS_00033602_1 70 1 0 0.000135092108728133 0 0 0 0 4.0590708640415e-05 0 0 0 0 0 0.000177516288669684 0 0 0 0 0 0 5.08575916014496e-05 0 0 0 0 0.000856067802426022 0 0 0 0 0 0 XR_227111.1 LOC101905845 PREDICTED: Bos taurus uncharacterized LOC101905845 (LOC101905845), 0.0 1272 100.00 0.998581560283688 XR_249082.1 LOC101929606 PREDICTED: Homo sapiens uncharacterized LOC101929606 (LOC101929606), misc_RNA. 6e-34 149 74.15 0.327659574468085 0 noncoding 0 0 0 0 -0.00499624983967184 0.974999708419361 3.25646264674809e-05 0.99943168703069 GAGGCTGGAGGATGGGCAGCCGGTTCCCGCGGCTCCCAGTCTCTGCGCGCGGCCGACCCGTGTCTGCGTCCTCATTACCACTACAAAGCCGGGCAGACGTCGCCTCTTTCCAGAGCTGCGCTTTCAGCTGCGAACATCAAGAGGCCAGAAAACATCCAAGTGGGCCCGAGGACGCAGACGCCGCCTCGGTCCTGGCTTTATCTCTAGGGAAAGTTCCATTTTAAGAACCAGATGCCAACATTCCCGGACAGTTTATGGTATCCGGATCCCTCGGGGTGCGCATCCGCGGCTTAGAGTGTTAGCAGCAATTATTTATCGTCTGCCCTGGAGAGGAGGTCCTGAACACGACTGTCCTCGGCGGACCCTGGGGGTGGGGGTGGGGTGGGGACACACGACTGTTCCCGATCCGGTTATCTGGTTTAGCAGAGTTTGTTGTGGTTTTCGAGGAAACAGCATCTGGGTTACATAAGGATTCAAGTTTTTGCTTTGCTTGTTTATTTAATACCTTGGCAAGAGGGAGCCCTCACTCTGAAACTAGATAACCGAATTTGGGTTTAAAACAGCCTTAGATGAGGGGCAACGAGAGGGGAAGAAAATGAATCAAACCACGAAAAGCAAACAAGGGGATGTTTATTTTTCTCCCTTTGGGTAGTTTTGAAGACCTGCCTAACCTCTTACTTCTCGTCGCGCACAGCTAATAAATCG TCONS_00028730 . 5' 3321 TCONS_00028730 . 5' 3321 EMBV3_01504 ATTACAGTGAACTGCACGACTCTTCTCCAGCACCTGCGGGAAGGCCTTCTCCAGGCCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01439 CTTTGCTTATTCATTTAACGACCGCACAGCTCCGAAGTTTGGCCTCTATCGTTATGCGGC Gene GeneID:784635|KL:XM_002691754:282_cdna Constitutive 0 NULL GeneID:784635 12 GENE KL NULL klotho EMBV3_34966 AGATTGAGAATGTCAGCCACCTAACAGAGCTGCAGGAATTCTGGATGAACGACAACCTCC Gene GeneID:505297|PPP1R7:NM_001034238:14_cdna Constitutive 0 NULL GeneID:505297 3 GENE PPP1R7 MGC126927 protein phosphatase 1, regulatory (inhibitor) subunit 7 EMBV3_09488 CCCTCCCGTAAAAATCAAGATAAATGCCCAGAGAGAATCTTCATTGTCCCTGCCTGGGCC Gene GeneID:504236|TMC4:NM_001075152:19_cdna Constitutive 0 NULL GeneID:504236 18 GENE TMC4 LENG4 MBOAT7 MGC139930 transmembrane channel-like 4 EMBV3_13706 CGACATCGTGTCCATCCTGGGCCCGCTGCGTGACCAGCTGCTGACCCTGAACCAGCACGT Gene GeneID:100337500|LOC100337500:XM_002698506:613_cdna Constitutive 0 NULL GeneID:100337500 26 GENE LOC100337500 NULL undifferentiated embryonic cell transcription factor 1-like EMBV3_18973 CGCATGGCAATGAATGCCTTTGGTGACATGGGTCAGTGTGGTTCTTGTTGGGCGTTTAGT Variant GeneID:281108|CTSL2:NM_174032:75_cdna 324^470 2 EMBV3_07843 GeneID:281108 8 GENE CTSL2 CTSL CTSL1 cathepsin L2 EMBV3_20059 TTGGCTCTTTGGCCTGGTGGACGGGCTGATCCAGGCTATCTTTACACTACGATTCCCTTA Gene GeneID:614895|LOC614895:XM_002689044:127_cdna Constitutive 0 NULL GeneID:614895 7 GENE LOC614895 NULL similar to olfactory receptor MOR277-1 EMBV3_04082 TCATCGAAACTCCAGAACAAACATCAAAAGCTTGTCAGCTCATCTGCAGCTTACATTTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18667 TTCAGCTTCCGAGGGGTGAAAGTGTACACCATGGACCGCGGCCTCATCTCCTACAAGGGA Gene GeneID:281374|FURIN:NM_174136:62_cdna Constitutive 0 NULL GeneID:281374 21 GENE FURIN PACE furin (paired basic amino acid cleaving enzyme) EMBV3_02924 CTGTTTTCAGTAAAGGCAGAGAGGATCGGGCAGAATGAAATCTTAGGACTTTGCTATGCA Gene GeneID:519774|LOC519774:NM_001079598:1132_cdna Constitutive 0 NULL GeneID:519774 13 GENE LOC519774 NULL hypothetical LOC519774 EMBV3_04347 CACAAGATCTGCACCCCGCTGACCCTGGAGATGTACTACACCGAGCTGGACCCCGAGCAC Gene GeneID:531593|CALY:NM_001075953:171_cdna Constitutive 0 NULL GeneID:531593 26 GENE CALY NULL calcyon neuron-specific vesicular protein EMBV3_02539 GTAAACCTTAATCCCCAATCTATAAGCCAACAGACACACCCAGAGTGGGCAGGACAGCTC Gene BVT0102_378509 + 0 NULL GK000007.2:1-112638659 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00179596 TCONS_00169477 TCONS_00056480 TCONS_00171161 TCONS_00013240 TCONS_00170157 TCONS_00252296 TCONS_00221595 TCONS_00240489 TCONS_00010615 TCONS_00088693 TCONS_00098385 TCONS_00107397 TCONS_00090417 TCONS_00031871 TCONS_00154811 TCONS_00140493 TCONS_00169479 TCONS_00081419 TCONS_00199297 TCONS_00174545 TCONS_00224157 TCONS_00250478 TCONS_00060444 TCONS_00174541 TCONS_00073417 TCONS_00056222 TCONS_00222044 TCONS_00240831 TCONS_00013239 TCONS_00169478 TCONS_00064981 TCONS_00169645 TCONS_00174540 TCONS_00153601 TCONS_00154809 TCONS_00042246 TCONS_00039773 TCONS_00132044 TCONS_00154810 TCONS_00171162 TCONS_00150268 TCONS_00250298 TCONS_00174544 TCONS_00031828 TCONS_00110376 TCONS_00102425 TCONS_00058234 TCONS_00154812 TCONS_00130398 TCONS_00187310 TCONS_00202904 42 XLOC_085141 XLOC_109368 XLOC_103372 XLOC_034283 XLOC_103753 XLOC_008038 XLOC_103528 XLOC_155237 XLOC_134909 XLOC_147153 XLOC_006166 XLOC_053479 XLOC_058631 XLOC_063307 XLOC_055198 XLOC_018116 XLOC_094549 XLOC_050298 XLOC_120950 XLOC_104638 XLOC_137453 XLOC_153421 XLOC_036736 XLOC_045182 XLOC_034025 XLOC_135353 XLOC_147495 XLOC_039705 XLOC_103408 XLOC_093365 XLOC_025624 XLOC_023590 XLOC_080693 XLOC_091840 XLOC_153241 XLOC_018073 XLOC_066280 XLOC_061863 XLOC_036031 XLOC_079107 XLOC_113358 XLOC_124060 Coding TCONS_00179596 XLOC_109368 Coding Coding - 3:99968921-99976242 - TSS134355 7321 2 TCONS_00179596_16 405 0.995082638983745 1 0 2.2899730733807e-05 2.87794733106343e-05 1.46660483268652e-06 6.61670287463767e-07 1.53646147036544e-06 6.28636240086872e-07 5.72528955562941e-06 1.21959670911563e-05 5.74881503638329e-06 0.000780002652451121 0.000524875399509416 0.000765542978596544 0.000139250951259028 0.000374871407518322 4.26007064693583e-05 0.00240846066750101 0.00195592431671475 0.00489058798563395 1.09503770484616e-05 4.87551939026511e-06 1.22570456212253e-06 0.0026724491859505 0.0033515583835469 0.00270820785064512 1.27136386568317e-06 4.52394845141639e-06 5.25248538403041e-06 0.00182989328022288 0.0018967866127545 0.0033944148952754 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2479 90.46 0.246414424258981 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 6e-08 66.2 69.48 0.0208987843190821 TCONS_00179596_12 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 2e-25 110 28.41 0.723287671232877 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACACATAAAAGGAAGAGCCAAAGCGCTCTCATGGACTCTCTCTCCTGCGTTCATGCGCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCTTAAGAGCTGTAGCATGGTTCCAAGACCCAAGAGCTGTGATGCGCTGAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACATACACTCGTGTGACATCTATGGTGCCGTGACTCGGGTTTAACCTGGCTGAAACAACCTTTGCGCAGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGCAAAACTCCCGCACTAGAAGTGGAAAGCGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACTGGGACAGTGAAAATAGAACTCAGCAGAAAGCTCACGTGGCCCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGTAAGAGGTCCTTGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCATTTCTTGTTTCCTCAAACCTCCCACAAACAGGCAGGCAGCAGGGGAACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGGTGGGGGTTCTTCTGTCCTTTATCCTGTGCCAAGGATCAGACCAATAAAATTATGAGGACCGGTCAGATATTTAGCAAATCTTCCAGTGGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCTGGCTAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAAATTTGTTAGGATCCAGAGAGAAGCCACCCTTCAGGGTGTGAACTGTTGGCAAGGTCAAGGGCTGGGGCCATGGAATTAGGCCGGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATAAGTGAGAGGACCATCCCAGCCATTGGGGAACCACCCACTCATCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTAGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACACTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCTCTTCCCTCCTGTTTCATGCTCTTTTCCTGATCCCCATCCAGACCCACAAGCCTGCCTCTACAATCTTCTGGAGAGACAACCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGGATGCCCAAACTCCAGTCCGGGGGGGTCCCAGGAGGTCATCACACCTTGACCTGCCTAGAGATCAGTCTTCGAAAGGTTGTCACACCTTAACCTGTTGGGGATCCTCTAGTCCGAGGGGTCCCATGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGCCATCACGCCTCGACCTGCCCGGGGATTTGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTACACCCTGACCCAGGGACACCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAAAAGATTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAACCTATTACTCGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCATTGCCTTTCTGGAGAGGTTAAAAGAGGCACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGATAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGACAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAAAAAGAGACAAGGCATGCTCAGATGCTGGCCGCCCTCCAGAAAAGCCCTATGGCAAACCCAGAGTCCTTGAAGGACAAGGCACAAGACAAATGCCTAATCTATAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGCAGCACTCTGCCCTGGGGACCCAAGAGCCTCAAGGTCAAGAGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGTGGCCTGCTCCAGCCAGCCCGCCAGTCACAGATAACCATCACGGGGCTGGAGCCAAGAGTGCACCTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTCCAGGAAAAGCAACTACTAAAAGATTGACCTGAGCACTTCTTTGTTGCTGGGATGGACAAATTTTCCCATCAGTTTCTGGTGGTCCCTGAGTGTCCTACTCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAATCCATTACACCTTCAATAGAGAGGGGCCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGCCCACCAAGCTGAACCAGTCATCATTATCCTCCGAGACCCTACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGGCTCAGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGTTTGTGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGAAAACAGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCTATCCCACAGTACCCAATCCCTACGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACTACTGGCTAAAGAATCCCAATATCGTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACACCAACAGATGACTTGGACGGTATTACTTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGAAAGGCCCTTAGCCAGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGTACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCAAAAACAATTGCGAGCTTTCCTGGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGATGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGTCTGTAGCTTACTTATTCAAGAGGCTCGATCCAACTTCCCAAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATTGGAGAGGCCATTTATGGATGTCTGATCAAAGAATTCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCAGGTATGCAGTAGTCTCCAATTTTGAGACCACAGAGGCTAGGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAACTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATATCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCAACTCTTGGAGGCAGTCCATCTGCCCACTGAGATTTTCAGTCTCCCACTGCAAAAGACACCAAAAAGGGAGCAGGGAAGTGACACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTAAGAGACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATATCGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCTTCCAAATATTACTAGAAAGGTCCTTCAGAGGAACAGGCGTCCAAACAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACATGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGACATATACATTCACAGGATGGATTGAAGGCTTTCCCACCCAGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCTAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGTATCGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAAGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGCATTGCCTCTGAGGAACAGGTTGGTCTTAGTCCTTATGATATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACACTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAGCCCACATGGAAGGGCCCCTACCCTGTAATACCTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGACACCTATTCAGAACTACCAGTGAGTGCCTTCTAATGAACACCCCCAAAATCTGGTTTCTGGGTATAAAATTTCTCAGGATAACCCTAAAGAGCCAACACAGCTTGACAGATACTGTACTCCAAAACAGAGAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCCATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATACAAAACTACAACTGACCACGGAAAATATCACACACCCTTGGACACTGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAAGGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGAAAGTAGCCAGAAAGACCTCGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATTTCTTGAGGGGGGAATATTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCAAGGACCAGAGTGAAGACTTCAGGTAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATTAAAAGGAAGAGCCAAAGTGCTTTCTCATGGACTCTCTCTCCTGCGTGTGTGCGCTCTTCCTCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATACAGCTGTAACACTGATTTACTTAAGAGCTGTAGCATGGTTTGTCCAAGACCCAAGAGCTGTGACGTGCCAAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGTAGGAAAGTAGGATACATGTTTTGAGTAAAAAAGGATTTTTATGCATGGCTGGGCTGAGATTAGGTTAAACTTATTCAGGTAAATGGATTTTGTTATTAAAAGTAGACTGGTGCAGGACTAGATTTGGTTCCTCTATTCTAAGAGAACATGTTTACTTAGAATGCTGCTTTTGATAAGATTGTATGAACTTGCCTTTAAGTGATCTGTATTTGTTTTTAAATAGTCACAGTGACCTATGATTCTATCTGACCAAATATTTTTAAAACTTTTTGATATTTTTTATGCACTTCCTATCAAATTCTAATTAAAGTTCTTTTGACTTCAGCTAGCTTGGAGATGCTTCAGAGGGCCCTTCAGAAAAAAATTTAATATAATTTAAAACTACATATATTCATATTAAACTGGCTAGAATTGGTTGATATGTTAAATTACACAGAAGTCAGTGAATGATCAGCCTCCTCAGATTATATGTTATGAATAAATTTTATTAATACAGACATTCTAGAAACTA TCONS_00174208 . 5' 11514 TCONS_00174208 . 5' 11514 EMBV3_31840 TGCAACAACTGAGGAGGGTCTCCCCTTCCTCCTGCCTGCAGGACAGAAATGACTTCGCAT Gene GeneID:538620|LOC538620:XM_002707835:161_cdna Constitutive 0 NULL GeneID:538620 8 GENE LOC538620 NULL similar to interferon alpha H EMBV3_19383 GTAGGATTGGGTTGCTCTTCATTTCAGTGGGCGTGTGTCTGTGTTTTGGGTTGCTCTTTG Gene BVT0102_055012 + 1 EMBV3_28868 GK000007.2:104752241-104890335 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214821 1 XLOC_130772 NonCoding TCONS_00214821 XLOC_130772 NonCoding NonCoding - 7:104834680-104837545 - TSS160575 1575 2 TCONS_00214821_3 78 2 0.450768156424581 0 0 0.00023422333218859 0 0 0 2.22160434647492e-05 0 5.79038263890696e-11 0 0 0 6.43344383257633e-05 3.14200166126181e-11 0 0 0 0 0.00021854224318887 0 0 0 0 0 1.86854684526073e-05 0.000125252696931608 1.37110114320069e-05 0 0 0 0 noncoding CAGCCTATTTCCTTAATAAACAGAAGTAAGCCAAAGAGCTTCCAGCCTTGTGCTGTTTTAGCTGAGAAGAAACCAGAAAGAGAAGGTCAGGATGGAATGCAACTCCCTTTCCTTTGTGACCTCCTCAAAGGAAGATGAGAGAGCAGTGTGAGATTTCTGATTCCACCCAAAGAGGCATCACTCTCAGAGGCTAAGAGCTCATTGAAGTGCTCCTTTCAAGATGTCAAGGGCAAGCAGCTGGGCTTGGGGGAAGTGCAGAGATAATTCTGCTGAGCCTTTGTTTCCCAGCCCGTCTGGCAATCACCAGCACTGCGGCAACGACAGGAAAAGCCTTCAACGCCCACTTCCTTGCCACACAAGAGCCGCATTTCTGAACTGGGTCAGCCGGGTGAGGCGTGGCCACCTGTATGGACCTCCAGGCACGTGAAGCCACTCTTGCCGAAGACGTTTGGTTGGAGAATTTTGGTTTTGTGGCTGTGTACACGTTCTGTCATTGCATGGCCTGTGATGCAGAGAGCATATCTCTTCCCCCTGAAAAGCCTTGGCAGAGAGCTTTCATTTTGGAGGAAGCTTATTTCCGGGCAACCATCTCCAGGGAAAATGAGTGTGAGGCAGTAGGCAGTAAACAACATCGTATCCCATAGGGACGGAGGTGACCCGAATGAGCTCCGGAGCGAGTCCGTGATAGCGGCAGAATCATTACAGTGTGTGCGCCTGCCCAAGTCCATGTGTAATTGTAATGTATAATTAATACAGAGCTAAAATTAAACTCCTGGGTGAAAGAGACGGGCAGGCTGAGGAGGCTGAGGAATATCAACCTCTAAGATACAGCTTGTTTATGACAAATGTAGGATTGGGTTGCTCTTCATTTCAGTGGGCGTGTGCCTGTGTTTTGGGTTGCTCTTTGCTAATATTTCAGCCTTGAGGAATAAGGATTCCACAGTTATCCTCTTCCCATTCCTTCCAACCCCAGGAAGAAACTCTCTTTCAAGTAACCTTGTCCTCAGGCCACTGAAGTACTTTGGTTTTTCCAGATAATTTTTCTCAAGTGACGAAACTCACAAGCAAACAGAGACAGGACACGCCCCTTTCCTGGTGCCATTCCTTGGTGCGCTCTTGACCCTGACTTTGCCATGAGTTTGCAGGCGTGTCACCTGAGGAGACTTCCAGCTCTCGCTCGTGAATACGGCTCACAGCGCCCTCCACCATTCTTTGGACCTTGAAGAGAGGTGACCACTGGTTGCCATTGTGGCCCTTGATGGTTAATTAAAGTTTGATTCTGGGAGCAGCGGTTTTTTTGAAACAACTCTCAGGGTAACTAAGCTTACTTCTACTTTTCAAACCCAGACTTCACGTTAGCCTCTGCATTCTATTTGTGCTAAATGTGCAGTACTGAAGAATTTAGAGAGAAGACAGTTTTTACTTCTCTTCTTTCCTAGTTGATTGTTTGAAACTCACTGACAGGCTTGAGCTGAACCATCGTCTGGTTCCGAATTCCCACTTCAGCGTTGTCCACACGCGGACCCTCTGTTCCTGCTTTTAGCTGGATGCTCTACCATTTTCTACCAGAGGTTA TCONS_00218247 TCONS_00218248 r 3' 52791 TCONS_00218247 TCONS_00218248 r 3' 55655 EMBV3_00977 TCCTTCAAAGACTATGGGATCCACAGGCCTCCAACACCCCTGTCCACTGCAGACACTTAG Gene GeneID:534491|GRAP:NM_001102173:75_cdna Constitutive 0 NULL GeneID:534491 19 GENE GRAP MGC166297 GRB2-related adaptor protein EMBV3_07691 ACCAACGTGTAGCCTTTCCGAGGGTATTCTGCCACTGCGAGATTTGCACTACATCATGGT Gene GeneID:531741|LOC531741:XM_002685029:209_cdna Constitutive 0 NULL GeneID:531741 1 GENE LOC531741 NULL similar to Src homology 3 domain-containing guanine nucleotide exchange factor EMBV3_38177 CTGTGCTCTCTCTGGTGGAACTGTTGAAACAAAATATATAGAGTCGATCTATTGCTCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33857 CTTGTCTTCTCTTCACCATGGCTTCTTCTGTCCCATGAAGCTGAGGTCTTGAAGCAGCTT Variant GeneID:616317|STMN1:NM_001034790:284_cdna 105^277 2 EMBV3_11150 GeneID:616317 2 GENE STMN1 MGC127518 stathmin 1 EMBV3_30328 TCCAGGAGGCATGTGAGGCGTATCTAGTCGGCCTTTTTGAAGACACCAATCTGTGTGCCA Gene GeneID:518318|LOC518318:XM_002688505:13_cdna Constitutive 0 NULL GeneID:518318 7 GENE LOC518318 NULL similar to histone cluster 1, H3f EMBV3_24291 CCAAGGACCTGGTGAGTTCCAGAACCAAGGAGGAAGGGAGGGCCAAGAAGGAAGACATCA Gene GeneID:617351|H1FNT:XM_002687347:30_cdna Constitutive 0 NULL GeneID:617351 5 GENE H1FNT NULL H1 histone family, member N, testis-specific EMBV3_12428 CCGCTTTATCTGCAAATCCGTTCCAGTGTTTATCAGCTACCTTCTAGCAGCTTCAGCACC Gene GeneID:510233|FAM175B:NM_001166587:27_cdna UTR3_Alt 4 NULL GeneID:510233 26 GENE FAM175B KIAA0157 BRISC complex subunit Abro1 EMBV3_37431 TCCAGTGAAGATTCGTCTTGGCACCCAACATAAGGCAGTTCAACACAACGCCCTTGCCCT Gene GeneID:513486|RDM1:XM_002696054:361_cdna Constitutive 0 NULL GeneID:513486 19 GENE RDM1 NULL RAD52 motif 1 EMBV3_28197 TGATCACCAAGAAGTTCAGCAACCAGGAGACCAGCGTGGAGATCGGTGAAAGTGTGAGAG Gene GeneID:100336819|LOC100336819:XM_002700438:19_cdna Constitutive 0 NULL GeneID:100336819 X GENE LOC100336819 NULL PRPS2 protein-like EMBV3_16064 GTGTATCCTGAAAGAACATGCACTTTTTCATCAAGTTTGGGTTCTAAATTTAAACTGCAG Gene GeneID:535744|CPNE8:NM_001098085:10_cdna Constitutive 2 NULL GeneID:535744 5 GENE CPNE8 NULL copine VIII EMBV3_19441 GTAAGCCTTAGAGTAGTGACTTCTGGAGCAGGGAAACTTAGAGGTTAGAGTGATGAGACC Gene GeneID:784704|LOC784704:XM_002699980:59_cdna UTR3_Alt 1 NULL GeneID:784704 X GENE LOC784704 NULL similar to DnaJ (Hsp40) homolog, subfamily A, member 1 EMBV3_03441 TGGCAGGAGAGCCTCGCAGGTCACTAGGTACAGAGAACCCAGGCCTTATGTTAAAGTCAT Gene BVV0102_274039 + 0 NULL GK000004.2:93554975-93557350 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182344 TCONS_00182339 TCONS_00182340 TCONS_00182342 TCONS_00182341 1 XLOC_110839 Coding TCONS_00182340 XLOC_110839 Coding Coding CALU 4:93532849-93556285 j TSS136276 3386 1 TCONS_00182340_4 315 7 0.855813953488372 0.00382279263106395 0.00359166971579544 0.00309527614217481 0.000824796745311579 0.00242198074079677 0.000337445766882156 0.00105002140568704 0.00209503518755403 0.0019503824314703 0.000418445894201353 0.00181832366502677 0.000361164972452753 0.000440425011744264 0.000378830313245401 0.000435505241852419 0.0040697477710927 0.00516330369571891 0.00275409665172082 0.00233795614033805 0.0027846049270802 0.00374314242557343 0.000300557274385462 0.00179763846604083 0.00324175398097598 0.00529262879795651 0.0016000767112133 0.00306258770247101 0.000288279617805408 0.000504956543751567 0.000893088968374224 XM_005205720.1 CALU PREDICTED: Bos taurus calumenin (CALU), transcript variant X1, 0.0 5992 100.00 0.980803307737744 NM_001219.4 CALU Homo sapiens calumenin (CALU), transcript variant 1, mRNA. 0.0 3878 85.01 0.995274660366214 TCONS_00182340_4 sp|O43852|CALU_HUMAN CALU_HUMAN Calumenin; 0.0 642 99.68 0.996825396825397 5 coding 1 0 1 1 -1.67936896376957 0.00823779782139433 -0.00387932931156505 0.94541635487231 TGGCTGATGATTGGTCTGGAGGCTGCCGTCGTGGAGGACAGCGGCGGGGAGCGGAGCCGCTTCCGGCTGGGCGGGGCTTGCGCGCCAGAGCTAAGCCGGTGGGAGAGCGGCGGCAGCGGCATCCTGGGCTGTGGGTGCGACGGAGAGAGATCTGGTTATCATGGACCTGCGACAGTTTCTTATGTGCCTGTCCCTGTGCACGGCCTTTGCCTTGAGCAAGCCCACAGAAAAGAAGGACCGCGTACATCATGAGCCTCAGCTCAGTGACAAGGTTCACAATGATGCTCAGAGTTTCGATTATGACCACGACGCCTTCTTGGGTGCCGAAGAAGCAAAAACCTTTGATCAGCTGACACCAGAAGAGAGCAAGGAAAGACTTGGAAAGATTGTAAGTAAAATAGATGGCGACAAGGACGGGTTTGTCACTGTGGATGAGCTCAAAGACTGGATTAAATTTGCACAAAAGCGCTGGATTTACGAGGACGTAGAGCGGCAGTGGAAGGGGCATGACCTCAATGAGGACGGCCTCGTTTCCTGGGAGGAGTATAAAAATGCCACCTACGGCTACGTTTTAGATGATCCAGACCCTGATGATGGATTTAACTATAAACAGATGATGGTTAGAGATGAGCGGAGGTTTAAAATGGCAGACAAGGATGGAGACCTGATTGCCACAAAGGAGGAATTCACAGCTTTTCTGCACCCTGAGGAGTATGACTACATGAAGGACATAGTAGTACAGGAAACAATGGAAGATATAGATAAGAATGCTGATGGTTTCATTGATCTGGAGGAGTATATTGGTGATATGTACAGCCATGATGGAAATGCTGATGAGCCAGAGTGGGTCAAGACGGAGAGAGAACAGTTTGTTGAGTTTCGAGATAAGAACCGTGATGGAAAGATGGATAAGGAAGAGACCAAAGACTGGATTCTCCCCTCAGATTATGACCATGCTGAGGCAGAAGCCAGGCACCTGGTCTATGAATCAGACCAAAACAAGGATGGCAAGCTTACCAAGGAGGAGATTGTTGACAAGTATGATTTATTTGTGGGCAGCCAGGCCACAGATTTTGGTGAGGCCTTAGTACGACATGATGAGTTCTGAGCTGCAGACAGAGGAACCCACATTTCTTCAAAATAATTTATTTTTACAGCTTCTGGTTTCACATGAAATTGCGCTACTGAGACTGTTATTACAAACTTTTTAAGACATGAAAAGTTATAACAGAAATGATCCCGTCCCCATTCCTCCTCCTCTCTGAGGGACAGGAGGGAAACCGTGCTTCTGAGGAACAACTCTAATTAGTACACTTGTGTTTGTAGATTTACACTTTGTATTATGTATAACATGTGTGTTTATTTTTGTATTTGTTCTCTGGTTGGGAGTATGATATGAAGGATCAACATCCTCAACTCACACTTGTAGGCAAACATTAGCCCTTCTCTCTTTCTCAACCCTTATCATGTAATTTTTTATAATTTTGACTTAAGTTTAAGCCTGAGATCAATAAGAAATGTTCAGGAGAGAGGAAAGGGAAGAAATATTCCCCACTATTTAGAAAGAGAACACTTAAACTTGCCTATTGATAAGTGTATTTCATAAGTAGTAGGGGCCGCATGTTCCATTCAGTTGCTTCATGTCCAGGTCCTAGCATTATCTCGGCAAGGACAGATCCCTGTGCTATAAGAAAGCTTGAATCGACTTTATTTCATTCATCCTTTTTTTCCCCCCCTTCCCTGTAAGACTAGCTGTTTGCTAATTTTGTCAAGCACAGCTGTGGTGGGAAAAGTTGGGGCCAGTGTCTTGAATATCAATCAAGTAGTGAGTGTGATCTCTTTACAGAGATATAAATAGAAACAGCTGGAAAACTAAAGAAAAAATCCAAGTGTTCTTAGGGCACATGCTTTTTTCTGGGTGTGCGTCTATTGAAGTGCTCAAGCCTGTCTTTATTCAATCAGTCAGTGCCCCATTCAGCTTCTATTTCCCCAGGTGTTCCAAGGAACTAATTTTGATTTCATTGCAGTCAAAATGTGCTTTTCCAATTGTGTCATTGAAAGTGCCTTTAATGAGAGAAACGGTCACTGAATGAGGATTCTCTTAAGAAACCCTAAGATAAAAAGAAAGCAGACGAATTGGACCACCTTAAATGAAAGCTTAGAACCTCCTGTTGTGGTGGGGATTTTTTTCTTCCCTTTCTCTTTTGGACAGTGGTTCAATAGCAGTATTAGTTAGGGGCTTGGTTGCAGTGTTCTTACCTTGTGGGCTGATTGCTGAAAACCACATGCTGCTGAATTTACCAGGGATCCTCATACCTCAGAATGCTAACCACTTACTACCAGGCCTGTTTCTGTGTCAGCTGAAGAGGCTGAGCTAAGGCTCAGAGATGAGAGGACTCTTTGGTTTGAGGACCGTCGCTCACCCTTCCTGCCTTAGACCCATCCCTCCCTATGTCCCCATCTCCCCGCTGCCAAAAAATGTTTATCATGGATCAACATTGTCAGTCCTTATCAAAGAGAGGAACATTGTAGAAAGAGCTGAAGAAACCACCTCTGTTCCCAACTCACCTATATTTTACATAACAAGAAACTGCCTTTTTTTTTGGTCCCTTTCATACACATGGACCTCTTTTGAGAAGAATTATGTATTCCAAGTTTTTAGCCCTCAGGTTACTAAGACAAATATATATATATATAACCTTTATTATTTCATGTATCTTTCTGGATAATACATTCAGGTGGTGCTGGGTGATTATTATAATCTGAACCTAGGTGTATCCTTTGGTCTTCCACAATCATGTTCAGGTGGGCTCCTTGGCCTGGTAAAAGGCCAGATATCACGTAACTTCACCCTGGCCTTTGCATTGAGCTCTTGAGAGTGGATACATTCTTTGAACCCCCATATAAGGAAATGGAAATTCTCGGCCTTCCAGATTCCCCACTTGAATTGTTAAGAAGACTGGGGATAATTAATAATGCCACCAACCCTTGCTTGGAGAGGGCACAGTGCAAATTGTGTGGCAGGAGAGCCTCGCAGGTCACTAGGTACAGAGAACCCAGGCCTTATGTTAAAGTCATGCACTTAGAAAGCAAATCTCCATCTGCTAAGATAGCGACTTCTGGATGCTGGGTGCTCATCAGTAAGCATTTGTACTCTAATCTCTAATGACCCTCCTGGAATTTTTTTTTTTTCTTTTTGGTTTAAATCAAGCCTGAGGCTGGTGAACAGTAGCTACACACCCACATTGTGTGTTCTGTGAATGCTAGCTGTCTTGAATTTGGATACTGGTTATTATTTTTTATAGAGTGTAAACCAAGTTTTATATTCTATAATGCAAACAGGTACCTATCTGTTTCTAAATAAAACTGTTTACATTCACTGAAGG EMBV3_27290 GTGCACAAGAAGACCTGTACTACCATTGCCTTTACACAAGTCAGCTTGGACGACAAGGCC Gene GeneID:100295726|LOC100295726:XM_002695459:131_cdna Constitutive 0 NULL GeneID:100295726 18 GENE LOC100295726 NULL similar to ribosomal protein L7a EMBV3_07033 CTCCGGATGGCAGAGCGTGGGGTCTCTCCTGACCTCATTAGAGTAATTAATGTGCCTTTT Gene BVV0101_087460 + 1 EMBV3_35363 GK000007.2:45363069-45407609 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07303 ACTGCCCCAGTTCACGTTCAGTCTCCACAGCATGGTTTCAAAGGACAGGCCCAAAGCCTT Gene GeneID:768001|MGC133709:NM_001077061:252_cdna Constitutive 0 NULL GeneID:768001 11 GENE MGC133709 NULL hypothetical protein MGC133709 EMBV3_27622 ATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGGGG Gene BVT0102_004727 + 0 NULL GK000005.2:28947193-29012106 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00010367 TCONS_00244651 TCONS_00250553 TCONS_00219681 TCONS_00098385 TCONS_00254922 TCONS_00251890 TCONS_00251853 TCONS_00129726 TCONS_00141355 TCONS_00249573 TCONS_00177994 TCONS_00141464 TCONS_00141615 TCONS_00017462 TCONS_00218852 TCONS_00244653 TCONS_00048822 TCONS_00200531 TCONS_00198662 TCONS_00088289 TCONS_00244654 TCONS_00222057 TCONS_00056147 TCONS_00116799 TCONS_00019991 TCONS_00189806 TCONS_00197973 TCONS_00148253 TCONS_00207228 TCONS_00250544 TCONS_00239410 TCONS_00175881 32 XLOC_142855 XLOC_005918 XLOC_150512 XLOC_153496 XLOC_133000 XLOC_058631 XLOC_157854 XLOC_154831 XLOC_154794 XLOC_078439 XLOC_085783 XLOC_152516 XLOC_107767 XLOC_085892 XLOC_086043 XLOC_009039 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_120316 XLOC_053076 XLOC_135366 XLOC_033950 XLOC_070965 XLOC_010669 XLOC_115843 XLOC_119632 XLOC_090135 XLOC_125746 XLOC_153487 XLOC_146076 XLOC_105660 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_02289 AATAGTCACCTAAGCCGTCTCCCCTTCGAATACCCTTGAAGCTGTTGTATCCTGACCCTC Gene BVT0102_295107 + 0 NULL GK000030.2:141201330-142041441 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08051 CAAGTTCTGTGGTCATGTAATGAGAGGTTCATAGCCTCACGATCTCAACTGGCCCCGGTG Gene BVV0102_148294 + 1 EMBV3_07269 GK000001.2:57319748-57326874 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000708 TCONS_00000710 TCONS_00000709 TCONS_00000706 1 XLOC_000183 Coding TCONS_00000709 XLOC_000183 Coding Coding C1H3orf52 1:57279559-57321019 j TSS357 2053 1 TCONS_00000709_1 181 6 0.950625919583203 4.04622661592002e-15 4.76497444560844e-05 8.31082603999088e-05 1.16916351238709e-12 2.63192749867573e-11 1.44459770736891e-05 0.000395981285470032 1.73316770625537e-05 0.000241048740859084 0 0 0 2.79168303138627e-06 7.72863238338458e-06 6.6994969379305e-05 4.49604170779917e-05 4.04104972293445e-05 7.11755087979754e-20 0.000216689992626278 0.000777631730226815 0.00032234741245287 0.00112772943293308 0.000442382109908237 0.000802941102903818 2.36996822206948e-08 8.62921531244455e-05 5.49037082153094e-05 2.25393000305502e-10 0 0 XM_865244.5 C1H3orf52 PREDICTED: Bos taurus chromosome 1 open reading frame, human C3orf52 (C1H3orf52), transcript variant X2, mRNA. 0.0 962 100.00 0.259132976132489 NM_001171747.1 C3orf52 Homo sapiens chromosome 3 open reading frame 52 (C3orf52), 2e-134 484 71.70 0.497320993667803 TCONS_00000709_1 sp|Q5BVD1|TTMP_HUMAN TTMP_HUMAN TPA-induced transmembrane protein; 7e-68 210 65.16 0.850828729281768 0 coding 1 1 1 1 -0.0469071536483511 0.780456819472634 0.00923852619121253 0.890176543076685 ACTCTGCACCCGCGGGTGTATGCGTACTGCTTCCTGGCGGGCTGTTTAGTCCCCCTCTGCCGGTTCATGGAGGGGGCCAGTCCCCCATCTCCAGGAAATGAGCTGGAGCTCTCGGTGATCCAAGGGAGGCCAGAAGAGCAGACGCCTCTCAACGGAGCCGTCCAGGGCATCCTTTCTTCAGCCGAGGAGCCCTGCCCAGTCCAGGCTGACAAGGAAAGCCCTTGGAGCTCCTGTAATAAGAAGTTGATTGGAAAGTGCAAACTCTGGATGGTCCTTGCCTCTGTTTTCCTGAGTTTCATTCTAGTCATCATCATAAGCTTATGTCTAACTGGAGTAACTTATATCGATGAAGATGAAAATGAAATACTTGAATTGTCATCAAATGAAACATTCTTGGTCATGCTAAAGATTCCAGAGGAGTGTGTTTCTGAAGAGGAATTACCTGACATGCTTGAGAAGCGGGTTACACACGTGTACAGTGATTCACCAGCTCTGAACCGCTATTTCACTTCAGTTGAAGTCATGGACTTCAGGATTTCCATGATCAGAACATGGCTGGTTGTGAAACTCTGGGGCTTGATCCAGGATCCCTCTGCTCCTACGATAAGTTGAGCACGTCCGGAAGGCACAGCTGTGACGAATGATGAAGGTTGATCTATGTCTGACAGTAGCACTCTGCTGAACTTTGGGATGCGGAGAGTTCATTCCACTTTACAGAAGAGATCCTGAGAATTAACGTGGAAGGACTCAAAATGATGAGAGGCGTGGAGGCGGTCCTTTTTCTCCAGCTTCTGCACAGTTACAGAGTCTGCTTCAGTGTTTAACAAAACAGTACTCCAGCTCTGCCCAGCTGGGTCCGGACAGGGTGGTGTGGTGGGGCGGCTGGCAGACCTGCAGGGGGAGGTCCCTCCACCCACAATGGACATGCTCTTTTTAGGGCAAGGGGTTCTCTCAGGCAGGATCCCGCCAACCTGGGCTGGAGGAGAGAGAACAGGGAGAGGCCAAGTGAGGGAGAGTTCAGCCAGTCACTCTCCTCCCTCTCAACCCTACATTTGACCTACCTCCAGACAAGGCTGTGAGGAAAAGGCGTGCACTTTGTCAAAGGTAATTAACATTGTTCATGTCTACTTCCAAGACACGTTGACTTGTCACATCTCGGGAAACCAGCCTTGGCACATCACCCAATGTTACTGCATTATGTAGCACTACAGAAATGAGATGTGTGTTTCTTAATTATTTCCCTGCATAATTACTGTGTCTCCTGAACACCTCTTTTGGAGACACAGGTCCCTGTGAATTTTGAACACATGGCTCTTCATTTTGGATAGTTTGTCCATTTATATTTTCATCAGCTTCCATCAGACAATCGTTAAGACTGCTTACCATCTGCTAGAGGTAGTTCATGTTGACTTTTTGTTATCTGGGGTCACTAGCCTTCCTGTAGGACTCAGTGTCTTCAAGCACTGATTATGTATCTTATTGAAGATGGTTGTGAAATAGGAAGAACCACTCTCAGAACTAAACTGCTGGAAGTTTAATGCCAGATCCTTTGGCAGGTGAGGGTTGGGGGGAACAAGAGGGACTGTGTTGGTCGCCTACAGACATAGAATTACCTGTCAAGAGGGAACAGAGTGTCTTGTTAGGAAAATAACGTTGCTGGAAAATTTCCAGGCAAGTTCTGTGGTCATGTAATGAGAGGTTCATAGCCTCACGATCTCAACTGGCCCCGGTGGATGATGTCAGGGGAGGGCAGCTGTGTAAGGGGATGTGTCAGAGTGTGCATCTCAGGCTAGATTTGTCGAGCTCTTTAAGACCCAGGACTCTGGATAATGTGAATGTGCTTTGTTATTTAATTGGAAGATATGTTTATTGTAACTCGGTGTCTCATTTTGAGCATTGTTCCTCAAACTAGTGAAACAGGTGAATTTCCCTTCTTCCTCTTTATATTTTATATGTCAAACCTAAACTTTCATGTTTGTACTTTTAAGAAAATAATGAAGAACTTCTTTGGAGAGGATTTAAAATATTGACAATAAATTATTTTTTGCTGCCA EMBV3_33071 TCTGGCCTTCTTCATCCTGAGGCCTCCAACACAGGAGAAACTACAGGAAGGAATGGAAGA Gene GeneID:789732|CD300LD:XM_002696214:274_cdna Constitutive 0 NULL GeneID:789732 19 GENE CD300LD NULL CD300 molecule-like family member d EMBV3_25634 AGGTACTAAAACCCCCACGAGGCGGAAGAGGTTAACTATCAATACATGACAACCAGACTG Gene BVT0102_436641 + 0 NULL GK000021.2:27984437-27993517 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118977 1 XLOC_072790 NonCoding TCONS_00118977 XLOC_072790 NonCoding NonCoding MTMR10 21:27984177-27992571 x TSS89223 2858 1 TCONS_00118977_4 94 0.616515045486354 2 0.659716430358632 0.000466535798456816 6.3286074519104e-05 5.18067625065114e-05 0.000286199998792941 0.000124379659140818 2.75350832383914e-05 5.91741306209469e-05 4.13906314839912e-06 0.000664297804069089 0 0 0 2.00789720391254e-06 1.64590400420562e-06 1.71665547948666e-06 0.00144164311021072 0.000487960120617913 0.000930591880863598 0.00055325149988831 0.000239043465477748 8.49749044040116e-06 0.00034532847638655 0.00019901707840955 0.000586585633391126 0.000254544352950644 5.42337655369696e-05 0.000168106932385644 2.01647815209841e-05 1.01916304626008e-05 6.73169708523971e-05 XR_229173.1 LOC101902644 PREDICTED: Bos taurus uncharacterized LOC101902644 (LOC101902644), 0.0 643 100.00 0.124212736179146 0 noncoding 0 0 0 0 -0.17407466473939 0.300464897569411 0.00498490361220204 0.913683925782798 GGTTCCGTCTCCGAGCAGACAACGGCTGCGGCGGAGTTTTGCAAGTTTCCACCGAGCCGGCGGGGCTCGCTGGAAGGTGGCTTCCCCGCAACGGAATCCGGGGCCGGGGTCCGGAGTCCGGGACAGCCTCCCGGGCCGGCCCGCGCGCGGCTCCCCGGAAGCGCGATGAGAGGGCGGCAGTGGGGAGACGGCTGTTTACCTGGGGCGGCGGCAGGAGGTACTAAAACCCCCACGAGGCGGAAGAGGTTAACTATCAATACATGACAACCAGACTGTGTTCATGACCTAAGTTGCCACAATTCTGAGAACTGGGAACAAACCAACTCCAGGACTGAAGATTAATTGTACCCAAAATGATCAAGATGACACTGGTCAGACCACTGATGACCAATTTCAAGATGACTGTCAGAGCTACCTGTGCTATTTCTGCATGAAGCTCCCTCCTTCTGCCTAGAAAAGCCCTTGCCTACTGATTGTCAGTGGTGGGAGTCAGCCATTGAACAGGAGTCTCCTCTCCCCCTGACCCCCTGCAATGTTGCCAGCTTCTGAAATAAAGCAAACTTCCCACCAACCTTGCCCCTTTACTGACTTTAGAGCAGCCAGCAGCCAGACCCCACTTTCAGTAACAATGCTAGTTGGGGACGGTTAAAAGAGTCCACATAACAGAAAGTGATGGTGGAAGCAGTCGGGGAGAGATAGTGTATGGTGGTTATGTACAAGGAAATGACAACACACCCCAGTGTTCTTGCTTGGGAAATCCCATGGGCAGAGGAGCCTGGTGGGCTATAGTCCATGGGGTCGCAAAGAGTCGAAAAACGACTGAGCAACTAAACAACGTCTACAAAACTATGCCATTACCTGAGTATATGGCCCTTGAAGATAACTATTAAGTCATTTAAAACATCTTTTTCCTGAGGGGGAATTCTGGGAAGATGACAACAGCAGCATAATTTTTCAGTTTCCCCAGGAAAACAGACAAAGGAACTATAAAGCAAAACCGAAGCCCCATGGACAACATTCACCACAAATCTAAGTGAACTGGTTTCCCCAAGATTTCCAAAATATAGGTAAGTAGGAGTAAACCACAGCACTTAGAAGATTTTTGTGATATCAGCAAAGGGAATCAATGAGGCATCTGGAGAATTCCCAAATAGCCAGAAGGTATTTACTGGCCTGGCCAGTCAAGTGGAGAAGAGCAAGTGAAGTAGAGAATGGTGTTTGGGAGTGCAGGGGCTCCTGGTGGTCTGAGGGGTAGAACTTTTGAAACTGCTAGAGGAACTCTTGAAACTGACCTACCTGGGCTTCCTTTAAAGAAAGGGAGCCACACCAAGGACAGACTGCTGGGCATGGAAACAAAACGAGCCAAGTCAAGACAAAAGAAAGGGAAGGTCCAAATAAAGATGGAGGACCAAGAATCTCTGAAAATAAGCCGACTTTACAATTTTTATGTTGTTTGCACGGCATGTGGGAATCTTAGTTCCCTGACCAAGGACTGAACCTGTGCCCTGTGCGGTGGAAGCATGGACTCTTAACCACTGGCCCAAGGGGGAAGTCCCCTGGCTTTTACAAAATTTTAATGCCAGACTGTAAAAATAAAGAAGGTTCTCTTGTGAAGTTAGAAAAGCTATCCTGACAACTGCTGTCTTCAAAAAGTTTGAGAAAACCTATTTCACATAACAATAATCAAGGGAAAGCATGGAAGTTAAATCCCATAGACAAGTATTGTAATAAAAAAGAAGATCAGAATAGCATTCCTACAGACAGTAAAAGCACACCAGGAAGACACACCCTCCATACAGATCAAAAACAACACCCAGCATTTCATGGAGCTAAAAGACACAAAGAAGATCATAGGAAACATGAATAAATTAGGTAAACCAGAATTAGACATATTGCTTTCCAGGTGGCTCAGATGGTAAAGAATCCACCTGTAATGTGGGAGACCTGGGTTCAATCCCTGGGTCAGGAAGATCCTTAGAGAAGGGAATAGCTACCCATTCCAGTATGTCAACAGGAGACTCAGTGAGACTCCTGGGGATAGATTCAGGCCCCTCATCTGAAGCAAGGTAGGAGGGACCAAGAAAGGGGGGCTGTGTAATGAGTGGACAGGTGGAGAATTCTGATGAGAAGCTTTGCCTTCTTCAAACCTGTTCTCTAGTGCTGTCAGAGGTTCTCCAGCTTATTCTGAGAAATACTTTTTTTTAGGGTGTGGCAAAGGGCTTAAGAATTGATGCTTTTGAACTATGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAATCCATACTAAAGGAAATCAGTCCTGAATATTCATTTGAAGGACTGATGCTGAAGCTGAAACTCCAACACTGGAGACTGAACTGAACTGAACTGAACTGAAAGGGCTGAAAGTTTTCTGGGCATCCAAAGCAAAGAATTAGGAATGAGGCCAAATAGAATGGGTTTATCCTTGGGTCAAATAACACAGGGAACAGGATTGATTGAACAGTCTTGATGTAGCAATAGATAAGCAGTTGTTTTATTTATTAAATAAATGTTATCATTTATCAAATAAATGTTATCATTTATTAAATGTCAAAGTCCCATCATCCATGCAATGGTGTAGCAGTGCTTTCTGGTAAATCCAGCCCAGTTCAGGGATTCTGATCTGCACATGAACCTCTTTAGCCTCCAGAGTCTCTCTGATCAGTATTTTTAGCACAACGGCACTGTGTCTCTCTCTCTACCTCTCTCCCCAACTCTTTGCCACTTTATGGCAATGTTATGTCTGAAATTCCAAATTGAGCCTCACCTTTTGTTTTTAGCTGTGACTCATCTTTGACACTCTTGAGAACTCCCAC TCONS_00120878 r 5' 0 TCONS_00120878 r 5' 0 EMBV3_40208 TTGCAGAAGACATCATGGAAGAGGTGGAGGTTGTGACAGATGAGGAGCAGGAACAGTGGT Gene GeneID:790349|LOC790349:XM_002707902:2_cdna Constitutive 0 NULL GeneID:790349 Un GENE LOC790349 NULL similar to testis-specific protein EMBV3_33982 GACCCGGCTCTTCTTTTTCCATCCAAGACAAAGCTGCTTCCATCAGTGTACCAGATTTCC Gene BVT0102_308570 - 1 EMBV3_02494 GK000007.2:51521516-51683086 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00102424 TCONS_00078983 TCONS_00169477 TCONS_00171161 TCONS_00013240 TCONS_00013237 TCONS_00132043 TCONS_00243948 TCONS_00088693 TCONS_00098385 TCONS_00031871 TCONS_00154811 TCONS_00252294 TCONS_00253149 TCONS_00140493 TCONS_00169479 TCONS_00105301 TCONS_00199297 TCONS_00174545 TCONS_00025106 TCONS_00025108 TCONS_00187773 TCONS_00226267 TCONS_00230483 TCONS_00029929 TCONS_00252175 TCONS_00172905 TCONS_00243949 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00207061 TCONS_00187484 TCONS_00056222 TCONS_00132257 TCONS_00222044 TCONS_00135546 TCONS_00013239 TCONS_00169478 TCONS_00174540 TCONS_00161897 TCONS_00174543 TCONS_00211235 TCONS_00154809 TCONS_00187309 TCONS_00226268 TCONS_00115444 TCONS_00042246 TCONS_00039773 TCONS_00132044 TCONS_00154810 TCONS_00171162 TCONS_00117782 TCONS_00013238 TCONS_00102423 TCONS_00174544 TCONS_00174546 TCONS_00202430 TCONS_00031828 TCONS_00110376 TCONS_00238548 TCONS_00154812 41 XLOC_085141 XLOC_061863 XLOC_047868 XLOC_103372 XLOC_103753 XLOC_008038 XLOC_080693 XLOC_150314 XLOC_053479 XLOC_058631 XLOC_018116 XLOC_094549 XLOC_155235 XLOC_156090 XLOC_062534 XLOC_120950 XLOC_104638 XLOC_014669 XLOC_113817 XLOC_137960 XLOC_139973 XLOC_016184 XLOC_155116 XLOC_104243 XLOC_123974 XLOC_125580 XLOC_113529 XLOC_034025 XLOC_080738 XLOC_135353 XLOC_081769 XLOC_098782 XLOC_129745 XLOC_113357 XLOC_069614 XLOC_025624 XLOC_023590 XLOC_071948 XLOC_018073 XLOC_066280 XLOC_145215 Coding TCONS_00088693 XLOC_053479 Coding Coding - 18:16253891-16262851 - TSS66039 8960 3 TCONS_00088693_16 322 0.833816964285714 1 0 1.16138100847541e-05 7.96429858026615e-06 3.07256028026004e-06 4.42709753766115e-06 5.69941641360114e-06 9.36986144176691e-06 4.17213544200926e-06 7.63046551528769e-06 8.58928521701181e-06 0.00301046678642136 0.00239831088605626 0.0015763669782467 0.000227177578259478 0.00108690726800688 0.000384144385590756 0.000790121063971953 0.000515956829006995 0.000826027671964117 4.3811848144521e-06 3.31201459449274e-06 1.09063433137715e-06 0.000992635426179298 0.00198119839159111 0.00142769773920594 7.68687460946034e-06 8.69637334773621e-07 3.2494649242946e-06 0.00389999415994786 0.00174588384334866 0.00262377460897209 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2360 89.00 0.197767857142857 TCONS_00088693_12 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 4e-25 107 34.00 0.878228782287823 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 TTAAGTAGGCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATACAAAAGGAGGAGCCAAAGCGTTTTCTCTCGGACTCTCTCTCCCGCGTGCGTGCGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACATGGTTTGTCCAAGACCCGAGAGCTGTGATGTGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAAACAAAGAACCGAGGAACATACACTCGCGTGACATCTATGGTGCCGTGACTCGGATATAACCTGGCTGAAACAACCTCTGCATGGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGTGAAGCTCCCGCGCTAGAAGCGAAAGGTGAAGAAACTCAGTGCAGGGGAAGGCCCATCGTGCTGGAAACCGGGACAACGAAAACCGAACTCAGCACAAAGCTCACGCGGCCCAGTCTCAGATTCCAGAAGACCTCCAGTTAAGGTAAGAGGTCCTCGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCTTTCTTGTTTCCTCAAACCTCCCGCGAACAGGCGGGCAGCAGGGGCACAACTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACCCAAGCTGGTGGGGGTTCTTCTGTCCTTTCTCTTCTCTGTGCCAAAGATCAGACCAATGAAACTGTGAGCACCGGTCAGATATTTAGCAAATTTTCCGGCGGGCTATGAAGGGGATTCCTTGGCATGTTTTTCCCACTGCTTTTTCCTCTTGTCCTTCAGCTCTCTCCCGGGACTCAAGCCCAGCCAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAGATTTGTTAGGATCCAGAGAGAAGTCACCCTTCGGGGTATGAACCATTGCCGAGGGCAAGGGCTTCGGCCATGGTATTAGGCCTGGCTAGGTTTTGTGAGGGAATGGAATTCATATGCTAATGAGTGAGAGGATAATCCCAGCCATTGGGGAACCACCCATCCTCCCTCTTTTACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTGGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTCACTTGAAGTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACATTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCCCTTCCCTCCTGTTTTGTGCTCTTTTCCTAAGCCCCATCCAGACCCACAAGGTTGCCTCTACAATCTTCTGAAGAGACAATCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCTAATCCTACCCAATACTGGTCACATTGGAGATCTTGGGGACGCCCAAACTCCAGTCCCGGGGGTCCCAGGAGGTCATCACGCCTTGACTTGCCTAGGGATCGGTCTTCGAGAGGTTGTCACGCCTCAACCTGTTTGGGGATCCTCTAGTCCCAGGGGTCCCAGGAGGTCATCACGCCTCGACCTGCCCAGGGACCCAATCCTCAGGAGGCTGTCACACCTCAACCTGCCCGGGGATTCGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTGCACCCTGACCCAGGGACGCCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAGAAAGACTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAGCCTATTACTTGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCCATTGCCTTTCTGGAGAGGCTAAAAGAGGCGCTCCAAAAGTTTACCAACCTGGACTTAGACTCTTACGAGGGACGGGTGATTTTAAAGGACAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAGAAAGAAAGAGACAAGGCATGCCCAGATGCTGGCTGCCCTCCAGAGAAGCCCTATGGCAAACCCCGAGTCCTTGAGGGACAAGGCACGAGACAGATGCCTGATCTGTAGACAGGCGGGGTATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATCGGGCGACACTCTGCCCCCGGGACCCAAGAGCCTCAAGGTCAAGTGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGCAGCCCGCTCCAGCCAGCCCGCCTGTCACAGATAACCATCACGGGGCTGGAGCCAAGGGTGCAACTGGATGTGGCAGGTAGGTCTGAGAATTTCTTGATTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCAAAACCTGTACCATTTTGGGTGCTACACGAAAAGCAACTACTAAAAGATTCACCCGAGCACTTCTTTGTTGCTGGGATGGACAAATATTTTCCCACCAGTTTATGGTGGTCCCTGAGTGTCCTACCCCCTTATTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAACCCATTACACCTTCAATAGAGAGGGACCAAAAACTATGGGAAGACAAAATCAACCCCCAGGTGCTGGACGAGCCCACCGAGCTGAACCGGTCATCATTGTCCTCCGAGATCCCACTCGATTTCCTAATTGGAAACAATATCCTCTCAAAAGAGAGGCTCGGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGCTTGCGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCCCAGTAAAGAAAAAAGACGGAACCTGGCGAATGGTCCAAGATCTCCAGATCATAAATGAAAATGTAGTCCCCCTCCATCCCACAGTACCCAATCCCTATGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACCACTGACTAAAGAATCCCAATACCTTTTTGCCTTTGAGTGGGAGGCCCCAGGAGAAAAAAACCAACAGATGACTTGGACAGTATTACCTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGACAGGCCCTTAGCCGGGATCTCCTAGATCTGGACCTGGGACCTAATGAGAAAATATTACAATATGTAGATGATCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGATCGGGTACAAGAAATCCTCCAGTTGCCCTCCCCCACGACTTGAAAACAATTGTGAGCTTTCCTGGGACTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCGGCCCTTATATGAAAGCTTATAGGGACGAGATGATTCAATCCCACTGATGTGAGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTATGTCAATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCGATCCAACTTCCCGAGGTTGGCCCCCCTGCATTCGAAATATTGCAGCATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATGGGAGAGGCCATTTATGGATGTCTGATCAAAGAATCCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTCCCTACCCCTGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCCGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTAGATGGAAAAAGAAGAGCTGGGTATGCAGTAGTCTCCAATTTTGAGACCATAGAGGCTAAGCCTCTGCAACCAGGTACTTCAGCCCAATTAGCTGAGCTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAAAATAGCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGACCCCTTGACCACCCGAGGGTCCCCAATCAAATATGGTGGTCAGATTCTTCGACTCTTGGAGGCAGTCCATCTGCCCACTGAGGTTTCAGTCTCCCACTGTAAAGGACACCAAAAAGGGAACACAGAAGTGGCACGAGGGAACCAAGCATCTGATCAGGCAGCTAGGAGAGCAGCATTACAGAACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATTTGGGGTTAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGATAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCCTCCAAATACTACTAGAAAGGTCCTTCAGAGGAACAGGCCTCCAAACAACTATAAGACAGGTGGTCTCCTTTTGTCTCACTTGCCAATTAAACAACTCCCAAGGAGCTCAAAGACCCCAGCTGGCCCAGCCCATCCAACGATGTGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAGTACCTATTAGTTATGATAGATACATTCACAGGATGGATTGAAGGCTTTCCCACCCGGACTGAGAAGGCTGAGGAGGTGGTAAAAAAAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCCAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGCATTGGGCATTACTTATTATCTCCATTGTGCCTGGAGGTCTCAATCTTCAGGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCCGCACCTGCATTGCCCCTAAGGAACAGGTTGGTCTTAGTCCTTATGAGATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGACCATTGGGCAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGAACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCAAGAGTCAAGCCATGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGATACCTATTCAGAACTACCAATGAGTGCCATTCTAATGAACACCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGGATAACTCTAAGGAGCCAACAGAGCTTGACAGAGACTGTACTCCAAAACAGACAGGAGATAGATCTTCTGATCCCTAAACAAGGAGTGACTTGAGCTATCCTGGCGATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCGTGTTATGCTATATTGATGATGCTTATGATTATTCTATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTACAGCTGACCACGGAAAATATCACACAGCCTTGGACACCGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCACTGCCCCATTTCAGCAGGAAGTAGCCAGAAAGACCTCAACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGAATGTTAGGTAGTCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAAACATATAAAAGGAGGAGCCAAAGAGCTTTCTCTTGGACTCTATCTCCCACGTGCGTGTGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACACGGTTTGTCCAAGACCCGAGAGCTGTGATGCGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAGACAAAGAACTGAGGAACGTACACTCATGTGACAGAAAGCTAATTGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCTTAAAGGAAATCAGTCCTGAACATTCATTGGAAGGACTGATTTTGAAGCTGAAACTCTAATACTTTGGCCACCTGATGCGAAGAACTGACTCATTTGAAAAGACCCTGATACTGGGAAAGATTGAAGGCAGAAGGAGTAGGGAATGACGGAGGATGAGATGGTAGAATAGCATCACCAATTCAATGGACATGAGTTTGAGTAAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCGTGGGGTTGCAAAGAGTTGGACATGCCTGAGCAACTGAACTGAACACAGAAGCCACGTTTTTGGCCTCATGTTCTTCACCGTGAGTGTGCTTTCCAGTTCACTGCATCCCTCTCAGCCCTTCCTTTTCCACTTGACCTGCTTCACGCATTCATTCATCCTTTGTGGTCTTTTTGTGGCCTCTAACTCCTTGTTCATTTGTTTTAATATTTTGAGGGCTGTGGATCTTTTTGAGGATCAGTGGAAACTCTAAAATGACTCACATATCACACATAAGATAAAATGTTATATATGATTTCAGGATACTTAGAACTGCCCTGGATCCATCCAGGGATGAGCCCCCTTCTTGAGATGCACGGACCCCTTTACCTCAGTTATATTGAAGATATTTTGGCACACTGGAGTTGAAGGATTCTTTGCAATCTTCTGCTTCTCTGGAGTGGAGAAATCTCTGTCAGAGCTATCCACATGTAACTGTGCACGTATTTGTCATATACAAGGTCAAGTGCCCATATCCTCAAAACAAAGGGTTGTCCTAGCACACACAGAACATGATTAAGGGGAGTTGGCATGACTATCTGAGGGAGTATCCCTAAGGTCTTTGACAGTTTTCCACAGGAATCTGAAAAGAGATTGTCTTTGACCAGATTCTGGATAAAACCTAGACATAGGCATTGCTATTGAGCTGTTTCTTATCCTCATAGAAAAATGCATTTATTGAGAGAAAAGCCTCTTCCTGAGAGAAAAGGGGAAGAGGGTTCTTCCAAGAGGCTTAGAAGTGACTTTGCTCAGCAAATGGCTATTTATCCTCTCAAGTGATTGATAATATGCATTAAAAATCACCTTTGTGATTAGAGAAGAAGTTCTCTTAGTGGCTCCCTCCCAGGGGAAGGGTGGGGAGCTGGCTTTTATCAGAGCTCATCTTCCCAGGGAGGGTAGAGAATGAGGAACCCAAGAACAGTGAGCTTGGTCACCAAGAGAATTGAATTATAGTCCCATGAGATCATGCTGTCAGCTAGACTGCTTATCACATGTAAATCTGCTGCAAGCCTATGAGTTAGATTCTATTATTCCTGTTTTACATATACGGACACTGAGGCACAGAAAGGTAAGGTGATTTACCGCAGGTCACAAATCTTGGAGGCAATGGGTCAGGCCAACCTGACTCTGTCAAATACAGTCTTATCTACAATGCTGAGAGCTGCTCGGTGTGTGAGTGGGTGAGAGACTCAGGCTCCCCATATCAGCGTGAGTCATACTTGGTGGTGAAGGGAGGAGGAGGAGCGCAGGGCAAGATGCCAGCCAACTCCTGCAGCATCTCCTCCCTGAACGCAGCACCACAGAGCAGCAACTTCTCCTGTGAGAGGAGCCATAGAAGTTGCTTAAGGGAGCCCAAAGGGGATTCTATTCAGAATAGGAAGCAGACAGCCAACCTAAACTATCTCCCTGAAGGTGTGAAAACTCTTGGCTCTGACTTAATAACTAGTTACATTAACTTAGTACCTAAACTCTGCAAGGTCCCTTCTCTGGCATCATTTCATTTTCCTCTGAAATAACCTTGGAGCATTGCACATTTATTTCACCCACTTTTCTGCTTATACATTATCTTTCATAATAAAAAGGCAAAAGAATTCACATATACAACTCA TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 97374 TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 106333 EMBV3_13584 GTAAATTGGGAACATTGACATAGCTACAGGGCTACCAAACACGTTAATCGTGCTAGCAGC Gene GeneID:616638|C3H1orf77:NM_001035481:227_cdna Constitutive 1 NULL GeneID:616638 3 GENE C3H1orf77 C1orf77 MGC127628 chromosome 1 open reading frame 77 ortholog EMBV3_42740 TACACCACAACCCATCCTTCAGAGAGCAAAATTAACTTGCGCATACAGACCCGAGGTGCC Gene GeneID:539061|POLR1D:NM_001076144:61_cdna Constitutive 0 NULL GeneID:539061 12 GENE POLR1D NULL polymerase (RNA) I polypeptide D, 16kDa EMBV3_11745 CTGCTCCTGAGCTCTTAGTGGAGCTTCAAGAATCATGCAAGTAAACATCTGAAAAACCTG Gene GeneID:281227|HMMR:XM_002689357:30_cdna Constitutive 0 NULL GeneID:281227 7 GENE HMMR rhamm hyaluronan-mediated motility receptor (RHAMM) EMBV3_29889 CTACCAGTATGGATCGACCGTCTTTGGGGGCTGGAGCCGGGGCGACATCATTGAAAAGAT Gene GeneID:767822|PNPLA6:NM_001076547:114_cdna Constitutive 0 NULL GeneID:767822 7 GENE PNPLA6 MGC137670 patatin-like phospholipase domain containing 6 EMBV3_42532 CTTCCTTCTTCTCATCGCGGTTGCTGGACTGACAGATGTCATCAATGCTTCTTGGTGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21005 GACTGCTGGTATTTTCAACTTGCCATAAACTGAAGCTCTTCCAGATGTAGTCCATGGGCC Gene BVT0102_092827 + 0 NULL GK000025.2:40644041-40960557 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147416 TCONS_00147417 TCONS_00147418 1 XLOC_089360 NonCoding TCONS_00147417 XLOC_089360 NonCoding NonCoding - 25:40745149-40748918 - TSS109993 1783 1 TCONS_00147417_4 193 0.0443073471676949 4 0.527866242038217 5.83523386404604e-09 0.000195094137773174 0.000600354635069918 3.7239061851379e-05 1.66031560201059e-05 0 0.00025222795033294 3.53718333147084e-11 2.65328590793746e-05 0 0 0 0 0 0 0 0 0 0.00043165406867377 7.21219745228758e-05 6.11286549176801e-05 0 0 0 4.67243011494909e-10 0.000136224408993557 0.000180732077374986 0 0 0 XR_239954.1 LOC101906195 PREDICTED: Bos taurus uncharacterized LOC101906195 (LOC101906195), 6e-13 80.6 84.72 0.039820527201346 0 noncoding GCCAGGGAAGCCAGATGAAGGAATCCCCTCCATCTTGCCTTGGTTTGCACGTGGACGGGCCCACCATCCCTGTGCGGAGATGTGGATGCAGTAACTTAGCCTCTAATGGGATCGGGGAATATTTTTCTCAGAAGAACCACTGAGAACCCACGAGGGACGTTTCTTAATGAGTGATAGCTCCCAGATGAGACTGATGGCCCATGGACTACATCTGGAAGAGCTTCAGTTTATGACAAGTTGAAAATACCAGCAGTCTCAGCGAACAGTACTAACTCCACTTCAATTATCATTTGTTCTGAAAATCCTTTCTCTAAGTAAGCAGGGAAAACCCTAACTTCTTGTTCTGGGAAATAGGAACTAGCCGTAGCTCTTTTTTTTTTTTTTTTTTAAAGAAAAATAACTCTGGTTTCATGGAGTAACATGCCTCCACACCTTGGTCCTTTAGAATACGTGTATGGCTAAAGCTTTTAAAATATGTATAAAATGTCCACTTCTTGAGACCTTCTTATTGGGCTGGATAAAATTACACTGAGAAATTAATTGGCCCTTTGGGGCAGAAACATTCCAGTTCTGTGCTGGCCACCTCCTTGCCCCAGCATTATAGATGGGTTTCTCTGTAATCTGTTTTCAAGAATACCTAGAGTCTAAACATATCCCCTAAGACAGTAACCTAATGGGTCATGTAAGAGGTAACACTGTCTGGTGTGGAAAAAGTCTTAGAATTGGGCTCAAGAGAACTGGGCTCCTGCTCTGGCTTTATCACGGCTACTTTGCATCTATTAAACTTCCCTGGCTTGGTTCCTTCAACTGTAAAATGAGACGCCATTAGAGCCTCACTTACTCAGGATGATTCTGGAATAAAAAATTTCCCAGAGGTGTCTCCAGACCTTTCGGAGTAGCAGTGATGTCAATGCTTCTGCTGCAACTTCCAGCATACTGGCTTGGCTTTCCAATTTCCAAGCAAGTTTCCATAAAGGTTCCTCTGAACTGCAAAATCAATCACAGCAAAAGAGGCTCGGGGCACTTTTTTGAGCGTCCTGACGTCAAGAAGTTGCCCGAGCCACTGAAGAACAGGGAAGCCTGGCGTGCTGCCTTCCAAGGGGGTGCAGAGAGTCAGACACGACTGAGCCACCGGACAGCAAGATGGGCACGCGCTGCCATTTGCAAGGAAGGTCATGGATGGGCATGTGTTCCTGGACGAAAGGAAGAGGTTAAGTGTGGACTGGACTCGGCTGGCAGGCAGAGCGAGGGTGGTTTGCTTCAGGACACACTGGGACATGGTCAGCAGTTTGCCCGGATCTCACAATTGGCAAGAGTGGAGCTGAGACCTCCAAACCCTCATCTGTTCCACAGGTTCCCTCCCACCCCCTCCACATCTCGGAGCAAAGCAGAGGGTCATTGTTCAGACTTAGCAGAGGCTGGGGAGCGCACAGTGGGTGCTCTGAAAGCCGGAGCTAACCCCCGCTCAGAAACCTCGGCCTCGTGACCTGCTGTCCACTCTCCCGCCTGAGTTGTCCTCGCCTGGAGCAACAAATGCAGCAACAAGGAACCTGCACCCAGAGCTTCCTGGGGACACAGCCCCGAGCGGGGCGCAGGCCCTGTCCGGCTGCCATCACCACCTACGCGATCGCACTCAGTCATCACAGGCCCGGGCCTCAGACTGCGTGTCACTTTCCAGGCCCTCCTCCCACAAAAATTCTAGCCTCCCAGCCTCCAGGGCGCTTAGTTCACCCCATAAACTCGACTAATGCTTACCACATGCGGCGGAGCTCCGCCGACCGCG TCONS_00147412 s 5' 2104 TCONS_00147412 s 5' 2493 EMBV3_31103 GACAGTGCTTCCTTAATCACTTCAAAGTGCCTGCCATAAAGTAAGGCAAAAATAGTCCAC Gene GeneID:408019|CCR4:NM_001100293:32_cdna Constitutive 0 NULL GeneID:408019 22 GENE CCR4 NULL chemokine (C-C motif) receptor 4 EMBV3_09023 ATATGCCCTCTCCCCGGGGGAGCACCCCCAAGGTGGGGAAGGCAGGTGTGGAGCTCCAGA Variant GeneID:100140553|GJB4:XM_002686487:573_cdna 847^973 1 EMBV3_41617 GeneID:100140553 3 GENE GJB4 NULL gap junction protein, beta 4, 30.3kDa EMBV3_30827 CGCCTACTTGCAAGTCTTGCTTCTTTGGGATATCAAAATGTATTTTGTGATGTACTAAGG Gene GeneID:534349|UBE2E3:NM_001079783:29_cdna Constitutive 0 NULL GeneID:534349 2 GENE UBE2E3 NULL ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) EMBV3_05735 TTATATAAGATCTTAAATTTAGATTATACTAGTAAAATAAGCTGACTAAAAACAGTCATA Gene BVV0101_003330 + 0 NULL GK000001.2:103204729-103803100 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24605 GGACCTCGGAGAGCCGGCGCCAGATGAAAGTGCCTATGATTACACAGTACCACCGATGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18599 CCCCCGAGCCAGGGACAGGAGAAGTCGAAGAACTGAATGCACTGCAGGAAGAGCTTGAAC Variant GeneID:281210|GPX3:NM_174077:13_cdna 152^305 1 EMBV3_35115 GeneID:281210 7 GENE GPX3 NULL glutathione peroxidase 3 (plasma) EMBV3_35643 CATATGTTGGCTGCCTCGGTTGGAGAAGTGATTCCTTTCTCATTGGTCCAGTTTCCCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00068 AACAGTACATCTACAAAAGGAAAAGTGATGCGAGCTGTGCTGAAGTTTGCTGCTGCCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18719 TGAAAAATAGACTGGCCTAAGGAGCAGCAGTCGCTAGTGGCTAACAGTGTAAACTGGGCC Gene GeneID:281410|PLP1:NM_174149:36_cdna Constitutive 0 NULL GeneID:281410 X GENE PLP1 PLP proteolipid protein 1 EMBV3_08407 TGGGAGGTCCCGGAGGATGCTGGCCCCCAGAGATGAAAATAAAGATGACAGCTCCAGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06819 CAGACAACGAGGACAATTTTGATGGAGACGACTTTGATGACGTGGAGGAGGATGAAGGGC Gene GeneID:534232|POLR2F:NM_001037475:79_cdna Constitutive 1 NULL GeneID:534232 5 GENE POLR2F MGC133639 RPB6 polymerase (RNA) II (DNA directed) polypeptide F EMBV3_38126 AAGGGTCACAGATACGTCAACAACGACAAGACCCCGAAGGAGGACCTGTGCTCCAAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38007 CCATTTTGTAGGGTCCGATTGGCAGCAGAATAGCTTGGTGGTCTGTGATGGGCTGGGTCA Gene GeneID:514896|TRIM56:XM_002698128:442_cdna Constitutive 0 NULL GeneID:514896 25 GENE TRIM56 NULL tripartite motif-containing 56 EMBV3_13190 ACTTCGAACCCTTTCTGTTCATGAGTTGGAGTGCTCACCATTGTAGGCTCGTGTGTAGGG Gene GeneID:504452|POLR2C:NM_001034212:105_cdna Constitutive 0 NULL GeneID:504452 18 GENE POLR2C MGC127445 polymerase (RNA) II (DNA directed) polypeptide C, 33kDa EMBV3_06295 ATCTTCGCCAACAAGCAGGACCTCCCCGATGCCATGAAACCCCACGAGATCCAGGAGAAA Gene GeneID:100294979|LOC100294979:XM_002690832:145_cdna Constitutive 0 NULL GeneID:100294979 10 GENE LOC100294979 NULL similar to ADP-ribosylation factor 6 EMBV3_04375 TATCTTTCACGGAAGTACTTCGTTACTCGGGATAGACCACTGGAACAATGAGAAGGAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41042 TCAACCAGCAGAAGTAGAAATGCAGATACAGAATGGGGGAAAACGTGGGTGGTGCGAGAG Gene BVV0102_093211 + 1 EMBV3_02236 GK000014.2:24921502-24955075 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13733 CCGCCAGAGCCCATGGCCGAGCCGGCTCCGATAATGGACTTCCCAAACCAGAACTAATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05071 TTGCAGCTGTTTTCTGACCCTGCAAATGTCTGTCCTGGTGCCCAGTGCTTCTCTCGAATT Gene GeneID:519845|TOX2:XM_002692324:95_cdna Constitutive 0 NULL GeneID:519845 13 GENE TOX2 NULL TOX high mobility group box family member 2 EMBV3_10231 CACGCACGGGGAGCTGGGCGAAGGCGCCAGATTCTGGGGAGCAAGTGCTCGTGGACGTGG Variant GeneID:533011|MRPS25:NM_001075979:34_cdna 244^350 1 EMBV3_17741 GeneID:533011 22 GENE MRPS25 MGC134542 S25mt mitochondrial ribosomal protein S25 EMBV3_00730 TACCAGGTCTAACATTGACTGCCTCTGCCTGTCGCATGAGAACATTAACACAAGCGATTG Gene GeneID:281361|NRG1:NM_174128:15_cdna Constitutive 1 NULL GeneID:281361 27 GENE NRG1 MGC154949 neuregulin 1 EMBV3_42089 AACCCTTTGACTTCCACGTGCCCATCTCAAGACATTCCGATTGCAGATTTGAGGTTCTGG Gene GeneID:614773|ZFP36L1:NM_001101234:208_cdna Constitutive 0 NULL GeneID:614773 10 GENE ZFP36L1 NULL zinc finger protein 36, C3H type-like 1 EMBV3_39459 CTGTCTTCAGGATTGAGGACGAGCAGCTGAAGGTTGGCCTGTGGCATCATCGCACGCTCT Variant GeneID:515022|CCS:NM_001046187:6_cdna 646^820 3 EMBV3_38355 GeneID:515022 29 GENE CCS MGC137566 copper chaperone for superoxide dismutase EMBV3_14859 CCCGACTGCATCTGCTTACCCCACTTAACCTTCGGAGAGAGAGGACACGTCATACACAAA Gene GeneID:782581|DEXI:XM_002697963:683_cdna Constitutive 0 NULL GeneID:782581 25 GENE DEXI NULL Dexi homolog (mouse) EMBV3_32167 TGATGGTTGTGGTGTTGATGGGAATCTTGTCCTTCCAGGTCCGCCAGTTTAAGCGCCTTT Gene GeneID:540371|MARCH6:XM_002696434:58_cdna UTR3_Alt 2 NULL GeneID:540371 20 GENE MARCH6 NULL membrane-associated ring finger (C3HC4) 6 EMBV3_20156 TACCTACTGGCATGTGTTTTCACGGCTCTGTCTCACCAAGACAACCAGGGGCCGGCATGT Gene GeneID:618233|LOC618233:XM_002695100:557_cdna Constitutive 0 NULL GeneID:618233 18 GENE LOC618233 NULL similar to Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) (Basic cytosolic 21 kDa protein) EMBV3_30559 CCCGCTTTGACACCTGCGGCACTGAGTCTCAGAGAAGAAATAACACCTCAGTGATCGTCA Gene GeneID:516320|LOC516320:XM_002686381:190_cdna Constitutive 0 NULL GeneID:516320 3 GENE LOC516320 NULL similar to CUB domain containing protein 2 EMBV3_40346 AGGGCCCGGCCGATTCCCTTTCCTCCTCTGATGGGTTTTGGAATCACGATGTTTTAAATC Gene GeneID:617688|GMDS:NM_001080331:11_cdna Constitutive 0 NULL GeneID:617688 23 GENE GMDS MGC128091 GDP-mannose 4,6-dehydratase EMBV3_11100 ACTTCCATTGCCAGTGTCTTTCTTTGGTGCCTTTCCTGTTCAGCATTCTCAGCCTGTGGC Gene GeneID:280890|PAM:NM_173948:2_cdna Constitutive 0 NULL GeneID:280890 7 GENE PAM MGC137729 peptidylglycine alpha-amidating monooxygenase EMBV3_34864 GGGCCCACTGAAGCAGAAGGCTTTTCTCTGGGGAACCTGTCTCAGTATTGACTGCATTGT Gene GeneID:512233|HIPK1:NM_001109998:44_cdna Constitutive 0 NULL GeneID:512233 3 GENE HIPK1 NULL homeodomain interacting protein kinase 1 EMBV3_08079 GGGAGATCTTTGAGAGAAAGGCTAGAGAAAATCGGTTTGAATTTACCCGCCGGCAGACGC Gene GeneID:540867|TFAP2B:NM_001076247:344_cdna Constitutive 0 NULL GeneID:540867 23 GENE TFAP2B MGC143301 transcription factor AP-2 beta (activating enhancer binding protein 2 beta) EMBV3_17986 CAGGAGCTTTCCCAGATGCCCAGAGCCTTGTCTAAGCTTCCAGTTCTTGCCAGCAGTATT Gene BVT0102_429196 - 1 EMBV3_32711 GK000021.2:23668525-23705959 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43532 GCCCAGAACTATATTGGACTCTGATGATTCTCTGGAGTAAATGAGACCCCTTTCCCAAAC Gene GeneID:281093|CRYZ:NM_174025:2_cdna Constitutive 3 NULL GeneID:281093 3 GENE CRYZ NULL crystallin, zeta (quinone reductase) EMBV3_27335 CCAAGAACTAACTCATCTATGTGGCAAAATAGTGAGAAGATTTGTAAGTAGAGGTGACAC Gene BVV0102_354466 + 1 EMBV3_10382 GK000002.2:2025068-2181853 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243419 TCONS_00243423 TCONS_00243424 TCONS_00243425 TCONS_00243422 TCONS_00243420 TCONS_00243421 TCONS_00243418 TCONS_00243426 2 XLOC_150080 XLOC_150081 NonCoding TCONS_00243424 XLOC_150081 NonCoding NonCoding - MT:0-10168 - TSS183097 8068 2 TCONS_00243424_11 158 2 0.206648962329104 0.0286635825114442 0.0340900277985004 0.0205294602054705 0.0271408119365501 0.0372387757550663 6.73303897598583e-18 0.0233356593704019 0.0210131216034325 0.0240176462842004 0.0924487000917009 0.0530234659615676 0.0378935946767471 0.0105159701142548 0.0500912092751347 0.034434593750725 0.815023712291691 0.580883829379209 0.800971954054633 0.0170898393775506 0 0 0.327818663652801 0.380232513677686 0.438904894598179 0 0 1.6478895192944e-14 0.0777245261901415 0.0441874955120282 0.101752773194458 XM_005200960.1 LOC101905553 PREDICTED: Bos taurus uncharacterized LOC101905553 (LOC101905553), 1e-93 351 87.32 0.0350768468021815 NM_001190452.1 MTRNR2L1 Homo sapiens MT-RNR2-like 1 (MTRNR2L1), mRNA. 0.0 1032 76.86 0.17835894893406 0 noncoding 0 1 1 1 0.722720652112842 0.0967089894237901 -0.014824743364922 0.766917672903768 ATTCGGTTCATTCTAGTCCTTTTTGAGTTCACTCATAGGCTAGGCTTACAGCTAGGAGGATAATTAGGAAGAGGGCTATGGTAAGCATTGTGTTTAGATTTGCTGTTTGTGAGGCTCATGGCAGTGGTAGGAGGAGTGCAATTTCTAGGTCAAATAAGAGGAATGTGATGGCTACCAGAAAGAATTTTATAGAGAAGGGAAGGCGGGCTGATCCTATGGGGTCAAATCCACATTCGTATGGGCTTGTTTTCTCAGAGTATACATTTAGTTGGGGAAGTCAGAATGCGATGATGACGAGTAGGGTGGCTAGTGTAAAATTGGTCAGGAGGGCTAGTATTAAATTTATTATTCTTTTTCGGACTAGACCGAAACTAGCTGATTGGAAGTCAGCTGTACTAGTTAATACTAAAAGAATAGGAGCCTCATCAATAGATAGAAACATAGAGGAAAAGTCAGACTACGTCTACGAAATGTCAGTATCAGGCAGCGGCTTCAAAGCCGAAGTGGTGGTTAGAAGTAAAATGAAATTTTAATTGGCGGAAGAAGCAGACAATTAAGAAGGTGGACCCAATGATGACGTGGAGGCCGTGGAAGCCTGTGGCTACAAAAAAAGTTGAGCCGTAAACTCCGTCGGAGATAGTAAAAGGTGCTTCATAGTATTCTGAGGCTTGTAGTAGTGTGAAGTAGACTCCTAATGTGATGGTGATAAATAGGGCTTGTAATATATGCTTTCGGTCCCCTTCTATTAAACTATGATGGGCTCAGGTAATAGAAACTCCGGAAGCCAATAGGACAGAGGTGTTGAGCAGTGGGACTTCTAGGGGGTTTAGTGGGTGAATGCCTGTTGGGGGTCAGCAGCCGCCTAGTTCAGGGGTGGGGGCGAGGCTTGAGTGGTAGAAAGCTCAGAAAAATCCGGTAAAGAATAGTACTTCGGAGATAATAAAAAGAATTATTCCATAACGGAGGCCTTTTTGGACAGCTGGGGTATGGTGCCCTTGGAAGGTGCTTTCTCGGATAACATCTCGTCATCATTGGTATATTGTTAGTATATTTGTTGTTAGGCCAATTATTAGCAGGGTCATTGAGTTAAAGTGAAATCACATGGTTAGGCCGGATGTTATTAAGAGGGCAGACAAAGCTCCTGTAAGAGGTCAAGGGCTTGGGTTTACTATATGATAAGCATGAGTTTGGTGTGTCATTATGTGTTGTCATGCAGATATAGGCTGACTAGGAGAGTGAATACATAGGCTTGGATTATAGCTACTGCAAACTCTAGAATTGTTAGTAGGATTAGAATGGTGAATGTAATTAGAGCTGTTGTAGTGCTAATGCTTATTAGTGCAAGTGTAGCTCCTCCGATTAGGTGAATTAATAGGTGTCCTGCAGTGATGTTAGCTGTTAACCGCACGGCGAGGGCTATAGGTTGAATAAAAAGGCTGATAGTTTCAATAATTACTAGTATTGGGATTAGTGGAGTGGGTGTTCCTTGTGGTAAGAAATGGGCAAGTGATGCTTTAGTTTTATTGCGGAATCCTGTAATTACGGCTCCTGCTCACAGGGGGATGGCTATGCCTAGGTTTATTGATAGTTGTGTTGTTGGTGTGAATGAATGGGGTAATAGGCCTAGTAGGTTTGTTGATCCAATAAATAGGATCAGAGATATTAATATTAATGTTCATGTTTGTCCTTTAGAATTGTGGATACTCATTATTTGTTTTGATACAAGTTGAAGTATTCATTGTTGGAGGGTTACAAAGCGATTGCTTACTAGTCGGTTTGATGTTGGGAATAGTAGGCTTGGGAATAGTACGATAAGGGTTACGAGAGGGAGACCTAAAATTACAGGGGTAATAAAAGAGGTAAATAAATTTTCGTTCATTTTGTTTCTCAAGGGGTGTTTTGTTTTAATATTTTTGTTGGTGTCAGTTCTGGATTGTGATAAAAGTTGTGTTTTGAAACTTTTAGTTGAAAGATGATAAAAAGGGTCAAGAATATTGATAAGATCATTGTCAGTCATGTTGACGTGTCTAGTTGCGGCATGTCACCAAGGAGAGTATATGGCTCTCAATCTCTAACTTAAAAGGTTAGTGCTATATAGCTTCTTAGTGATTTTATAATATTGACGCAGATCATTTTTCAAAGTACTTTAGTGGGACTAACTCAAGGACAATGGGCATGAAACTGTGGTTTGACCCGCAAATTTCTGAGCATTGACCGTAATATAAGCCTGGACGGGACGATATAAGGGTTGTTTGGTTTAGACGGCCTGGGATTGCGTCTGTTTTTAGTCCTAGAGAGGGCACAGCTCATGAGTGTAATACGTCTTCAGAGGAGACTAACATTCGGATTGTTATTTCTATTGGTAGTACAACTCGATTATCGACTTCTAATAGTCGTAGCTCCCCTGGCTTTAATTCTGATGTTGGAATTATGTAGGAGTCGAAGCTTAAGTCCTCATAATCTGTATACTCATAGCTTCAGTATCACTGATGTCCTATGGTTTTTACTGTAAGAGATGGGTTATTGATTTCATCTATTATGTATAGAATTCGTAAAGAAGGAAGAGCAATTAGAATTAAGATGATGGCGGGCAGAATGGTTCAGATTGTCTCTACTTCTTGTGCATCTATCGTGCTTGTATGGGTCAGCTTTGTCGTTAGTATTAGTGAAATAATGTAAAGTACTAATGAGCTAATTAAGAAGACAATTATTAGCGTGTGGTCATGAAAGTGAAGTAGTTCTTCTATGATTGGTGATGTTGCATCTTGGAATCCTAGTTGTATGGGATATGCCATATGAGGTGTACAGGACTTTCACTTGTAACTTAACTTTGACAAAATTATATAATGTTTTACTAACACCTCGTTTATTGAGAGAGACATAGAGGTTATGATGTTGGCTTGAAACCAATAGTAGGGGGTTCGATTCCTTCCTTTCTTATTTTAGGTTAACATAGGTGGGTTCTTCAAATGTGTGATATGGTGGAGGGCATCCGTTTAATCATTCTAGATTTGTCGTGGTTAAGTCTACAGTCAAGACTTCTCGTTTAGATGCAAATGCTTCTCAGATGATGAAAACTATTAGTATAACTGCTGTTAGGGAAATGAATGAGCCTATTGATGAGATAGTATTTCATATTGTGTATGCATCTGGGTAGTCGGAGTATCGTCGAGGCATGCCAGATAGTCCTAGAAAGTGTTGTGGGAAGAAGGTTATATTGACGCCTACAAATATAATTGCGAAGTGGATTTTGGCTCATGTATCGTTGAGAGTATAACCTGAGAATAGTGGGAATCAATGAACAAATCCCCCTATAATAGCAAATACAGCTCCTATTGATAAAACATAGTGGAAATGTGCGACAACGTAGTATGTGTCGTGAAGAACAATATCGAGGGAAGAGTTGGCTAAGACAATTCCAGTTAAACCCCCTACTGTAAATAAGAAAATAAAGCCTAGGGCTCACATTATAGCAGGAGACCATTTGATATTACCTCCATGAAGTGTTGCCAATCAGCTGAAGACTTTTACCCCGGTTGGAATAGCAATAATTATAGTGGCTGATGTGAAGTAGGCTCGTGTGTCGACGTCTATTCCGACAGTGAATATATGGTGGGCTCATACGATGAAACCTAGAAATCCGATTGACATTATAGCCCAAACTATTCCCATATATCCGAATGGTTCTTTTTTTCCTGAGTAGTAGGTCACGATATGAGAGATTATTCCAAACCCAGGTAAGATTAAAATATAGACTTCGGGGTGTCCAAAGAATCAGAATAAGTGTTGATATAGAATAGGGTCTCCTCCTCCTGCCGGGTCGAAGAAGGTTGTATTTAGGTTCCGGTCTGTTAATAGCATTGTGATGCCGGCTGCTAATACAGGGAGCGAGAGTAGTAGTAGTACGGCGGTAATTATTACGGATCATACGAACAGAGGGGTTTGGTATTGTGACATTGCGGGGGGCTTTATGTTGATAATTGTTGTAATGAAGTTGATGGCTCCTAAAATTGAGGAAACTCCTGCTAAGTGTAAAGAGAAAATGGTTAGATCTACTGAAGCTCCTGCATGGGCTAGTGTCAGAGGTAGAAAATTTTTTCATAGTAAGTGTATTAGTTGGTCATAGCGAAATCGAGGGTAGGATGCTCGGATTCATAGGAAGGATATTGTGAGCAGTAGGGATTTAATGGTAAAATTGATTGTGTAGAGTTCTGGTATGTGTGGATTGTGGGATGTTCCTAGGAATAAAATTGCTGTAAAGATATTTATTATGATAATATTTGCGTACTCTGCTATGAAGAAGAGGGCAAATGGTCCTGCTGCATATTCTACGTTGAAGCCCGAGACTAGCTCTGATTCTCCTTCAGTTAAATCAAATGGAGCTCGGTTTGTTTCTGCTAGTGTTGAGATAAATCATATTATTGCTAGAGGCCATGCTGGGAGGATTAACCATATTTGTTCTTGTGTAGTAATTAATGTGGAGAGGGTAAAGGACCCACTTATTAGGACCACTGATAACAGGATAATTGCTAGCGTTACTTCGTATGAGATTGTTTGTGCTACTGCTCGTAGGGCTCCGATTAGTGCGTATTTTGAGTTGGAAGCTCAGCCTGATCAGAGAATGGAGTATACGGCTAGGCTTGATATGGCTAGTATAAATAGGACTCCTAGGTTTATGTTGATAAGAGGATAGGGTATTGGTAGGGGAATTCACATGGTTAAGGCTAGGCCTAAAGCTATGATAGGTGCTAGGATAAATATTGAGGCTGAAGATGTAGCGGGTCGTAGTGGTTCTTTAATGAAAAGTTTGATTGCATCGGCGATGGGTTGAAGTAGGCCATATGGACCTACGACATTTGGACCTTTTCGGAGTTGTATATAGCCTAGAACTTTTCGTTCCACTAACGTAAGGAATGCTACGGCCAATAGGATGGGAATAATTAGTATTAAGATGTTAATTATGAACATTTTGTTAAGGAGAGGATTTGAATCTCTGGATATAAAAGTTTAAGTTTTATGCAATTACCGGGCTCTGCCACCTTAACTAAGCCCTGTTCTAGGGCAGGGTTTTGTGTTGTCAGTTGAGATGTTATCATTGGTTGTCTTAAGGCGCTTGATTTAAAGTTGGCCTTATTTCTCTTGTCCTTTCGTACTGGGAGAAATACGTAATAGATAGAAACCGACCTGGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTGATAGCGGTTGCACCATCAGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTATTGTCGATATGGACTCTTGAATAGGATTGCGCTGTTATCCCTAGGGTAACTTGTTCCGTTGATCAAGTTTTTGGATCAATGAGCGATAGAGTGATTTGACTTGTGGGTCTAGTCTTTAAAATCGCTCGGAGGATTTTTTATTCTCCGAGGTCACCCCAACCGAAACTACCAACTCATGGAGATTGTTGTTATTCCTTAATGGTTAAATCTATTCTCTTTGGGTTGGTTAGTTAAAGCTCCATAGGGTCTTCTCGTCTTATTTGTGCATTCCCGCCTCTTCACGGGAAGGTCAATTTCACTGATTGGAAGTAAGAGACAGTAAAACCCTCGTGCGGCCATTCATACAAGTCCTTATTTAGAGAACAAATGATTATGCTACCTTTGCACGGTCAGGATACCGCGGCCGTTAAACAGTTGTCACTGGGCAGGCAATGCCTCCAATACTGGGAATGCTGGAGGTGATGTTTTTGGTAAACAGGCGGGGTTTGTGTTTGCCGAGTTCCTTTTACTTCTTTTAATCTTTCCTTAGATGCACTCCTGTGTTGGGTTAACAGTATAATCAATAAATTGTTTATTGTTGGATTATTTTTATTGACTGTTAGTGGTCAGAGTATTATCAGGCACTGACTTAGACTTATGCAAGGAGAAAATTTTTCTTGTTACTCATATTAACATTATTGCTTCTATTCTATAATAGATTAGTCCAGTATTGGGGCTAGGAGTTAATCATTTGTTGTTGGAATCTATTTAATTTTTGTTGTTGAGCTTTAACGCTTTCTTAATTGATGGCTGCTTTTAGGCCTACTATGGTAGTGTTAAATTTTACTCTCTAGTCAAGGTTGTATCCGTTTCTAAAAGGCTGTACCTTTTTAGACTAACTTTTAAAGCTACAGTGGGGTTTATTTGAATTTTTGGTATCTTTAAAGCTGAACTTAGATTCATTTTCTGGACAACCAGCTATCACCAGGCTCGTTAGGCATGTCACCTCTACTTACAAATCTTCTCACTATTTTGCCACATAGATGAGTTAGTTCTTGGTAAACTGTTTGTGAGTAGCTCGTCTGGTTTCGGGCTGCTTAGCTAAAATTCATTTTGTTAAGTCTTATACTAGTTAATTCATTATGCAAAAGGTACAAGGGGTAATCTTTGCTTTTTTATACTTTTAGTTTTTTTCTTTCATCGTTCCCTTGCGGTACTTTCTCTATAGCGCCGTACTTAGATTTCTATCTCCTATACTTTAAATTGGGATTAAATGTTTTGTTTTATTCTATCTTGGTTGTTTAGTCGAGAGGGTATCTTTGGGCTAGGTCTAGTTCAAGATATTCATAATGAATGAAGTCTTCTAGGTGTAAACTGGATGCTTTGTTTAAGCTATATCTTGATTTATCCAAGCACACTTTCCAGTATGCTTACCTTGTTACGACTTGTCTCCTCTCATGTAGCTAGTGCGTTTAAATAGGGTTAGATGCACTGAATCTATTTGAGGAGGGTGACGGGCGGTGTGTGCGTGCTTCATGGCCTAATTCAACTAAGCACTCTATTCTTAGTTTACTGCTAAATCCTCCTTTGGTTATTGGTTTCATAATAACTTTCGTGCTTGATTCTCTTGGTGTAGAGAATGTAGCCCATTTCTTCCCATTTCATAGGTTACACCTTGACCTAACGTTTTTATGTATCATAATTACGCTTACTTTTTTTCCTTTTTAGGGTTTGCTGAAGATGGCGGTATATAGACTGTATTAGCAAGAATTGGTGAGGTTTATCGGGGTTTATCGATTATAGAACAGGCTCCTCTAGAAGGATATAAAGCACCGCCAAGTCCTTTGAGTTTTAAGCTGTTGCTAGTAGTACTCTGGCGAATAATTTTGTTTATGTAATTATCTGTGTTTAGGGCTAAGCATAGTGGGGTATCTAATCCCAGTTTGGGTCTTAGCTATAGTGCGTCGGCTATTGTAGGGTCACTTTCGTCATTTATTTTTATTTTAATCATGGCTTTTTACAGCTTAGTTAGAATTTAACCCTATTTGGTATGGTGCTTTAACACGTTTTACGCCGTACTCCTGTTAGCTTGGGTTAATCGTATGACCGCGGTGGCTGGCACGAGATTTACCAACCCTAATTAATATAACTTAGTCAAACTTTCGTTTATGGCTTAATTTTTGTCACTGCTGTTTCCCGTGGGGTGTGGTTAAGCAAGGCGTCGTGAGCTACAGGGTGTGTGCTTGATGCCAGCTCCTCTTAGTTTTAATAACCTAGAGGGCATTCTCACTGGGGTGTAGATGCTTGCATGTGTAAGTTTATTAAGAGTTAACAGGAAGGCTGGGACCAAACCTATGTGTTTATGGAGTTGGGAGACTCATCTAGGCATTTTCAGTGCCTTGCTTTGGGTTAAGCTACATCAACGGGGGGGGGGGGCCTGCGTTTATATATTGACTTTGTTTGGAGTGCTAAATTGAGTATTGAAAGCGTGAAAAATTTAAATAAGTATCTAGGGAAAAGTCTGTTAAAAGTGGTGGTAGATATTTAAGGGGGAAATTTTTATGAAGGGGGGATATATAATATAATTTATGTCCTGTGACCATTGACTGTAATGTCCATGCTTATCATTATGCTGGTGCTCAAGATGCAGTTAAGTCCAGCTACAATAGATGCTCCGGGTCAGGGCCTTTGACGGCCATAGCTGAGTCCAAGCATCCCCCAAAATAAAAAAATACCAAATGTATGACAGCACAGTTATGTGTGAGCATGGGCTGATTAGCCATTAGT EMBV3_37966 CCACCTGCACGTAAAGAAAAGCCCAAAGTTAAAGAGCCTGTCAGCAGAATCGAGAAGGCC Gene GeneID:614073|CCDC23:NM_001040575:292_cdna Constitutive 0 NULL GeneID:614073 3 GENE CCDC23 MGC133534 coiled-coil domain containing 23 EMBV3_13976 GATTTTCCTCACAGTTTCTCATGTGATATTCCTGGACAACCTAATGTAAGAAAGTGTGGC Gene GeneID:533987|METT5D1:NM_001079782:41_cdna Constitutive 1 NULL GeneID:533987 15 GENE METT5D1 NULL methyltransferase 5 domain containing 1 EMBV3_38402 GTGGGCCAACAGAGGGCAAAAAAGAGAACCAGTTGCCCAAGAAGAGATCAGCGATCACGA Gene GeneID:767992|SSX5:NM_001077053:117_cdna Constitutive 0 NULL GeneID:767992 X GENE SSX5 MGC134359 synovial sarcoma, X breakpoint 5 EMBV3_20521 AATGGAGAGCTGGAACACATCCGGCCCAAGGGCCTGCTTCCTCGGGGCCAGCACCCCAAC Variant GeneID:282515|PAFAH1B3:NM_174665:59_cdna 362^484 1 EMBV3_07672 GeneID:282515 18 GENE PAFAH1B3 MGC142417 platelet-activating factor acetylhydrolase, isoform Ib, subunit 3 (29kDa) EMBV3_42892 CTACTAGCAGGATGACTCTGGGGGAAAATGACTTAGTCTCTCTGCTCCTCTGTGCAATGG Gene GeneID:534581|IL20RB:NM_001102175:54_cdna Constitutive 3 NULL GeneID:534581 1 GENE IL20RB MGC140349 interleukin 20 receptor beta EMBV3_33237 GTGATGTTCGTCACCTACGAGCAGATGAAACGGGCCTTGATGAAAGTCCAGATGCTACGA Gene GeneID:281563|UCP3:NM_174210:49_cdna Constitutive 0 NULL GeneID:281563 15 GENE UCP3 NULL uncoupling protein 3 (mitochondrial, proton carrier) EMBV3_32840 GACATTTAGAACAATAAAAAGACCTATTACTTTAAGAAAGTTGCCTTTCTTCTTGTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12135 CCCCTCTGCAGCCACCCCAACCCACGCAAGGATGTCATTCAAGTCTCCAAGAAGTTCCTG Variant GeneID:505916|SRM:XM_002694044:121_cdna 369^461 1 EMBV3_19406 GeneID:505916 16 GENE SRM NULL spermidine synthase EMBV3_16878 GGTTGCCTGAGGGGCTGCCTTGTATTTGAAACGTGCTTTCTATCATGCATTGACTGTATG Gene GeneID:768316|NRBF2:NM_001078131:19_cdna Constitutive 0 NULL GeneID:768316 28 GENE NRBF2 MGC143396 nuclear receptor binding factor 2 EMBV3_10652 GCCTTTTAGCTTTTATGTACTGAAATGGGCATTCTGGAAGCAGGAGGCAAGGGGCAGCCT Gene BVT0102_078454 - 1 EMBV3_09422 GK000017.2:63559647-63561377 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075835 TCONS_00077720 TCONS_00077719 TCONS_00077723 TCONS_00077722 TCONS_00077729 TCONS_00077725 TCONS_00077727 TCONS_00075836 TCONS_00077724 TCONS_00077730 TCONS_00077721 TCONS_00077728 TCONS_00077718 TCONS_00075833 TCONS_00075834 TCONS_00077726 2 XLOC_046664 XLOC_047131 Coding TCONS_00075834 XLOC_046664 Coding Coding TPCN1 17:63498271-63561362 j TSS57069 5181 1 TCONS_00075834_6 758 27 0.918307180218735 0.00021979163587009 4.08812838985579e-05 0.000493580085891854 0.000183200229667487 0.000133636466143649 4.50617944899962e-05 8.41492801650416e-05 4.48186773624877e-05 0.000704308138880355 2.31915116377472e-19 1.65417533002002e-84 6.00249360007277e-55 3.13692981442885e-05 0.000449550722798177 1.72324423838874e-05 2.0594847794829e-06 6.70900827526277e-38 2.20422096589351e-05 7.84355228267141e-06 5.06399183885481e-32 6.5285084010402e-36 2.56003486083199e-26 3.74582747549106e-93 4.74213448137669e-109 0.000381576496762068 0.000122887162725553 0.00012265075303798 2.08269236319773e-29 1.51881192697929e-38 2.27484151021758e-05 XM_005195075.1 TPCN1 PREDICTED: Bos taurus two pore segment channel 1 (TPCN1), 0.0 8799 99.08 0.959853310171782 NM_017901.4 TPCN1 Homo sapiens two pore segment channel 1 (TPCN1), transcript variant 0.0 3139 82.20 0.601042269832079 TCONS_00075834_6 sp|Q9ULQ1|TPC1_HUMAN TPC1_HUMAN Two pore calcium channel protein 1; 0.0 1345 92.82 0.970976253298153 1 coding 1 1 1 1 -0.131374077043288 0.75876551846106 0.0127120049039906 0.801547230941845 AGCTGCAACAGCTCCGGGCTCGGGGCTTTGGCGGCTGCACCGGCGGGCTGTACTGTGCTGTGCGGACCCCGGCGGTCGGTCCGGGTTGCTGGGGCGGCGCGTGTAAGAATTCGAGGCGTGTGAGGGATGGTCAGAGGAGAGGGCAGAGAAGATGCTGCTGATGGAGGAGTTTCTGAGAAGCACCACGGGGCCAGTGGCTTTGACTGGGAGCTCAAAGCAGAGACTATTTAAAGCCTTGGACATCACCTCCTGAGGCCTGCAGGAGTGAAGAGCATGGCTGTGAGTTTAGATGACGACGTTCCCCTCATCCTGACCTTGGATGAGGGTGGCAGCGCCCCACTGGCTCCCTCCAACGGCCTGGGCCCAGATGATCTGCCCAGCAGAAGAAGGCGAGAATAACGACAAGTTCTTCACCCACCCCAAGAACGCCAAAGCTCTGGCGGCCTACCTCTTCGCACACAACCACCTCTTCTACCTGATGGAGCTGTCCGCGGCCTTGCTCCTGCTGCTGCTCTCCCTGTGCGAGGCTCCCGCCGTCCCCGCGCTCCGGCTGGGCATTTACGTCCACGCAACCCTGGAGCTGTTCGCCCTGGTGGTGGTCGTGTTTGAACTCTGCATGAAGTTGCGGTGGCTGGGCCTTCACACCTTCATCCGGCACAGAAGGACCATGGTCAAGACCTCCGTGCTGGTGGTGCAGTTCGTGGAGGCCATCGTGGTGTTGGTACGGCAGACGTCACACATGCGGGTGACCCGGGCGCTGCGCTGCATCTTCCTGGTGGACTGTCGGTACTGCGGCGGCGTCCGGCGCAACCTGCGTCAGATGTTTCAGTCCCTGCCGCCCTTCATGGACATCCTCCTGCTTCTCCTCTTCTTCATGATCATTTTCGCCATCCTCGGTTTCTACTTATTCTCCCCTAATCCTTCAGACCCCTACTTCAGCACCCTGGAGAACAGCATCATCAGTCTGTTTGTCCTTCTGACCACCGCCAACTTCCCAGACGTGATGATGCCCTCCTACTCCCGGAACCCCTGGTCCTGCGTCTTCTTCATCGTGTACCTCTCCATTGAGCTGTACTTTATCATGAACCTGCTCCTGGCCGTGGTATTTGACACCTTCAATGACATCGAGAAACGCAAGTTCAAGTCTTTGCTGCTACACAAGCGAACTGCCATCCAGCACGCCTACCGCCTGCTTGTCAGCCAGCGGAGGCCTGCCGGCATCTCCTACAGGCAGTTCGAAGGCCTGATGCGTTTCTACAAGCCCCGGATGAGTGCGGGGGAGCGCTATCTCACCTTCAAGGCCCTGAATCAGAGCAACACGCCACTGCTCAGCCTGAAGGACTTTCATGATATTTATGAAGTTGCCGCCTTAAAGTGGAAGGCAAAGAGAAATAGAGAACACTGGTTTGATGAGCTTCCCAGGACAGCATTCCTCATCTTCAAAGGAATTAATATCCTTGTGAAGTCCAAGGCCTTCCAGTATTTCATGTATTTGGTGGTAGCGGTCAACGGGGTCTGGATCCTCGTGGAGACCTTCATGCTGAAAGGTGGGAACTTCGTCTCCAGGCACGTGCCGTGGAGTCACCTCGTCTTTCTGACTATCTATGCGGTAGAGCTGTTCCTGAAAGTTGCCGGCCTGGGCCCCATTGAGTACCTGTCCTCAGGATGGAACCTGTTCGACTTCTCCGTCACAGCCTTTGCCTTCCTGGGACTGCTGGCTCTGGCCTTCAACATGGAGCCCTTCTACTTCATAGTGGTCCTGCGTCCCCTCCAGCTGCTGAGGTTGTTTAAGCTGAAGAAGCGTTACCGCAACGTGCTGGACACCATGTTTGAGCTGCTGCCCCGGATGGCCAGCCTGGGCCTGACTCTGCTCATCTTCTACTACTCCTTCGCCATCGTGGGCATGGAATTCTTCTATGGAATCCTCTACCCCAACTGCTGCAATACAAGCACAGTGGCAGACGCCTACCGCTGGCTGAACCACTCCGTGGGCAACAGGACCGTCGTGGAGGAGGGCTATTACTATCTCAATAATTTTGACAACATCCTGAACAGCTTTGTGACCTTGTTCGAGCTCACGGTTGTCAACAACTGGTACATCATCATGGAAGGTGTCACCTCCCAGACCTCGCACTGGAGCCGCCTCTACTTCATGACCTTCTACATCGTGACCATGGTGGTGATGACCATCATTGTGGCCTTCATCCTCGAAGCCTTTGTCTTCCGAATGAACTACAGCCGCAAGAACCAGGACTCGGAAGTGGACGACGGCATCACCCTGGAGAAGGAGCTCTCCAAAGACGAGCTGGTCGCAGTTCTGAAGCTCTACCGGGAGGCAGGGGGAGCCAACTCAGACATTGCCCAGCTGCTCAAGATCCTCTCCCAGCTGGAGAGATACGAGCAAAATACCTTGGTGTTTCTGGGACGGAGATCAAGGACCAAAAGCGACCTGAGCCTAAAGATGTACCAAGAGGAGATTCAGGAGTGGTATGAGGAACATGCCCGCAAGCAGGAGGAACGACAGCTCAGCAGCTGCGTGGTCCCTGCCACCCAGCAGCCTCCAGGCAGCCGCCAGCGCTCCCAGACCATCACCTAAGCCCAGCCTGCAAAAGCCATCTCTTCTATGCAATAACACAATAGTATTATTTTACTACAATGTATCAAAGTAATGTATGTGTATATATGTATATGTTATATATATGTATACACATCCATATATATATGCACATATTTATATACAGAAAGGAGAGAAAGGCTGACAAGATGGGGTTTGGTTTATAATCGCCTTACCCTGTTTAACCCTGGAAGTCGGCTTCGTCTCGGGGGCGGTCAGGCCACCAAGAGCGGCTCTTAACGTGGAAGGCTCCAGAAGGCCCCTTCACAAGAGCACGTGAATAGGGCTGGCCTTCACAGTGGGCCCGCGTGCCTGTCGCACTGTCTTCCTGACGCTGCTCTCAGAATCCTTCCCTGCCCGGCAGCCTCCCCACTGACCTGCCCTACGGCCCAGGGCTCCTGTGTCCTGCTTTGGGGACAAAACCACTTAGGAAGGAAAGAGCCCACATCCTCAGGATGGTATTTCTCCAGATGTGATGATCATGGAATGGGTGTTCCCTTGGGAAACCAGTACCCAGCAAGCACCTGCCGGAACGAGTGATCCGGGGCCATGGGTACTCCATGTGGTCAGATCTCAGCCAGCGCCGGGCGGTCAGAGATTCTGTATCCTGGCTCCATGAGCCTTCTCACCTACCGTAAGTTTTAACCCTTGTTGCTGAAAATGCTTCTAAGATGGTCCATAGGAGGAGAACAGGCCAGAGGCCAGGCCAGTGGCTACCACCCCAGACCAAGTCCTAAAGTGAACGGGCTTTCTCCTTAAATCCTTTTGCCTTGGGATTGTCCTGTTCAAGCAAAAACATATTTTGGTTAATTCAGGATTCTGCCAAAGACCGCAGCAGGTCCTTCACATGTGTGCGTGCTGAGGAAAGGGAACAAAAAGCACAGAGGCTCACCTCGGGCCATCCACGGCCGCCCAACTCGTTGGCCCCCTTGGCCAGCTCTGCCCTCACCTTGAGCAAGTCACTCCCCGTGGACTTGACTGAGGTGGGAGCGGGGACTCGGCTCGCTCCAAGGTTTCCCCATCCCGGGAGTAGGTTCAGATAGCCCCTCGGTTTCCCGGGGACCTTGGGCGAATCCTGAGATTGGAGTGCCTTCGGGGCGTGAATGCACGGCAGGTGGGGTTAGCAGTGGTGGCTCCCGGGCTGCACACCCGGTGCAGGAGGCAGCATGCAGGGAGGACGGGGCAGGGGGAGGAGCCCCCGCTGGGCGTCCTGCTCCAACCGCAGCTCTCCAGCTGCCTCCATGAGCTAGAAAGGCGGTAGGGGGCGGGGGTGGGGTGGAGTGCAGAGACTCCGCCCTCCCCGCATTCTCTTTCCAGCAGGGCAGGACCCGGCTCCCCTACCCATCTCCACGGCCAAGTCTTGACTGTGGCCTCGGAGGGTTGATCGCCAGAGCCAGCATCCCATAGCTCTGCCCCTCATCAGGGGAGGAGTGGTGGTGTTTTTTTTTTTTTAAGCACAGCCCTTTAGGAAAACAAACCAATCACTGAGAACCACTGAGGTTTCCACCAGGAATCAGGAGACGGACATTGTCTTCCTCATCTCTGGGGAGCGACAGGCTGCTGTGGGCAGCTTGGCACCAGGCCCAGGCCTGGACCCCTTCCCCGCTCCAGAGAAGGAACTTTATTTGCACAACCGGGTGCCTTTTAGCTTTTATGTACTGAAATGGGCATTCTGGAAGCAGGAGGCAAGGGGCAGCCTTGAAAGGAGGGCATGAGTCCTCCGATCTCAGCATCTGCCCTCAGAAGGGGGTCCCAGGGAGGCTGAGTGTACCCCACGCCCACCCTCAGGGTGATGGCTGCTACCAGGAAGAGTGGAGTTGAGTCCAGGCTCCCCAGCCATCCTGCGAAAGGCCCTGTTTCAGTCAGGAACGGGCTGGAGGCCAAGGGGCAGCAGTGCGGATGGCCCGACCCCAGCCCCCGGTGGGCGCCCTCGTCACTGAGGCTAAGGACAGCTGCCCGTGGGGTCACGGGGGCTCCTCAGGCGGACCCTCCCACTCACACACAGGCCACCGAGCAGGGAGCGAGTGTCACTCAGGGCTGTGAGCTCACCCAGCTCAGACACTCTCACCTCAGCTTGGTGACACCGACGTGAGACGCGCCAGCCTGCTCTGGGTCCCTACCACCTATCAGTCAGCGTCTGATGGCCCTGTGCCGTGACCCAGCTTTGGGAGGGGGACGCCATCCGGCCCCTCCTCCTTGCTTCCCTCCCCTAACCCAGCCTTACTCCACACCACGTGACAATCATTTTGTATCGGTAGCGGGAACGACGCTGTAAGGTTTTGTACGTCGGCGATTTGTTACCTAGAAAACCCACCGTGCTGCGGATTTCTGGCATATTAATAAAGAGCCTCCGCTTTGTACGTGTGGCTGCCGCCTCGTGACTTCCAGCAGGCACCACGCGGTGGCTTCCATGATCGTGGGAAGCAGGAACAGGACCCAGCCGTGCCAGTCCATGGCACCACCTCAGCCCCACCCCTAGACGCGCCACAAAGTCCAGATCCGTCAGGCCCAAGAACCTTCGGCCCTGGATCCAACTGCCTGTCACCCTGGCCCGGGTTAAGAAGAAC EMBV3_43577 GCTTTTTGGAAACACGGAATGCAGGGTAAAAGCTTCAAATCAGATGAGGTTACCCAGGAG Gene GeneID:781335|MAP4K5:XM_002690833:148_cdna UTR3_Alt 2 NULL GeneID:781335 10 GENE MAP4K5 NULL mitogen-activated protein kinase kinase kinase kinase 5 EMBV3_31883 CCTTCCTCTACACTGTTCGTATGTCCCAGCAGGCTTGTGTTCGTTTGGTGATTGCCTCCT Gene GeneID:788438|LOC788438:XM_002687503:399_cdna Constitutive 0 NULL GeneID:788438 5 GENE LOC788438 NULL similar to olfactory receptor MOR210-4 EMBV3_11753 GCAGTTGAATTTTGATCTGGGACCTGCTGTCTCGTGCCTCTGCACGTGTATTTTCACACG Gene GeneID:513264|LPXN:NM_001025082:8_cdna Constitutive 0 NULL GeneID:513264 15 GENE LPXN MGC140379 leupaxin EMBV3_11165 GTCATATCTGAGTCTTTGTGACACCATGGACCATAGCCTTCCAGGCTTCTTTAGCCATAG Gene BVT0101_037795 - 0 NULL GK000020.2:44339423-44976516 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09913 CTGCAAAAGGGAAGCCCAAACGGGGTGATACATATGAGTTGCAGGTGCGTGGATTTTCAG Gene GeneID:100301169|LOC100301169:XR_084140:13_cdna Constitutive 0 NULL GeneID:100301169 X PSEUDO LOC100301169 NULL similar to magnesium transporter 1 EMBV3_02144 TCAGCTCCCGCTCGGCTCTATCACAAAAAGGTGGAGGAAGCCTTGACCATCAAAAACACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35330 CTGGCTGGAAATTAGGACTGCCCCAAGGCAGAGGAAAAGTGGATATAGGAGCTTCAGAAA Gene BVV0102_321317 + 0 NULL GK000004.2:46566404-46567644 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183845 TCONS_00183850 TCONS_00183848 TCONS_00183853 TCONS_00183852 TCONS_00183847 TCONS_00183851 TCONS_00183846 TCONS_00183849 1 XLOC_111222 Coding TCONS_00183853 XLOC_111222 Coding Coding SRPK2 4:46566450-46710416 = TSS137049 5262 1 TCONS_00183853_5 686 15 0.963553641510089 0.00220209457673471 0.00199798895675017 0.00137512349758629 0.00146103681416485 0.00223852019565385 0.000480434544110392 0.000566709399853806 0.00143798623804569 0.00213283247158356 0.000295846908680165 1.16093254340275e-179 6.26822326675963e-05 0.000187802559273112 0.000221820996255645 8.71363364799593e-07 0.00063045926205903 0.000399308585880336 0.000539537578304494 0.00267369356130571 0.00242848707436811 0.00092111080454112 0.000210672729878295 0.000393423253637004 0.00023511804338153 0.00259118689716947 0.000992957806986138 0.00191702819205982 0.000352867610494279 4.12132613987692e-08 0.000115504635310587 XM_590213.7 SRPK2 PREDICTED: Bos taurus SRSF protein kinase 2 (SRPK2), transcript 0.0 8985 100.00 0.946598251615355 NM_182691.2 SRPK2 Homo sapiens SRSF protein kinase 2 (SRPK2), transcript variant 2, 0.0 5279 91.27 0.713036868110984 TCONS_00183853_5 sp|P78362|SRPK2_HUMAN SRPK2_HUMAN SRSF protein kinase 2; 0.0 1185 96.72 0.931486880466472 2 coding 0 0 1 0 0.599330573824502 0.340843728378518 -0.0277051977654094 0.681948257768179 AGTCATGTGCATAGTTTAGCAAGGCCTGATGCCTCTGGAGCTTTTTCCCTTTATAGCACCATTGAATCCCAGTCCTGACAGAAGTACTGCGAATCTTGTGGCCTCATTCTGAACAAAAGGGATTAGAGAAGAAAAATCTCTTGATATAAGGCTTGAAAGCAAGGGCAGGCAATCTTGGTTGTGAATATTTTCTGATTTTTCCAGAAATCAAGCAGAAGATTGAGCTGCTGATGTCAGTTAACTCTGAGAAGTCGTCCTCTTCAGAAAGGCCGGAGCCTCAGCAGAAAGCTCCCTTGGTGCCTCCACCGCCGCCTCCGCCACCACCGCCTCCTCTGCCGGACCCTGCCCCACCAGAGCCAGAGGAGGAGATTCTGGGCTCAGACGATGAGGAGCAGGAGGACCCCGCAGACTACTGCAAAGGTGGCTATCATCCAGTGAAAATTGGAGACCTCTTCAATGGCCGGTACCATGTTATTAGGAAGCTAGGATGGGGCCACTTCTCTACTGTCTGGCTGTGCTGGGATATGCAGGGAAAAAGATTTGTTGCAATGAAAGTTGTAAAAAGTGCCCAGCATTATACAGAGACAGCCTTGGATGAAATAAAATTGCTCAAATGTGTTCGAGAAAGTGATCCCAGTGACCCAAATAAAGACATGGTAGTGCAGCTTATAGATGACTTCAAGATTTCAGGCATGAATGGAATACATGTCTGCATGGTCTTTGAAGTGCTTGGCCACCATCTCCTCAAGTGGATCATAAAGTCCAACTACCAAGGCCTCCCAGTACGTTGTGTGAAGAGCATCATTAGACAGGTCCTTCAAGGGTTAGATTATCTCCACAGTAAGTGCAAGATCATTCATACTGACATAAAGCCGGAAAACATCTTGATGTGTGTGGACGATGCATATGTGAGAAGAATGGCAGCCGAGGCCACTGAGTGGCAGAAAGCGGGCGCTCCTCCTCCTTCAGGGTCTGCAGTGAGTACTGCTCCACAGCAAAAACCTATAGGAAAAATATCTAAAAACAAAAAGAAAAAAATGAAAAAGAAGCAGAAAAGGCAGGCTGAGTTACTGGAAAAGCGCTTGCAGGAAATAGAAGAATTGGAGCGAGAAGCTGAAAGAAAAATAATAGAGGAAAACGTCACGTCAGTTGTACCTTCCAATGAGCAAGATGATGAATACCACCCAGAGGTGAAGCTAAAAACAGCAGGACTGGAGGAGGTGGCCGAGGGAGAGACTGCAAATAACAATGGTGAAGCTGAGGACCAGGAGGAGAAAGAAGACACTGAGAAAGAAAACACTGAGAAAGATGAAGACGATGTTGAACAGGAGCTCGCGAACATAGACCCTACCTGGATAGAATCACCAAAAACTAACGGCCATATTGAGAACGGCCCCTTCTTACTGGAGCAACAGCTGGATGATGAAGACGACGATGAGGAAGATTGCCCAAATCCCGAGGAATGTAACCTCGATGAGCCAAATGCAGAAAGCGATTACACGTATAGCAGCTCCTATGAACAATTCAATGGTGAATTGCCAAATGGACGACATAAAATTCCCGAGTCACAGTTTCCAGAATTTTCCACATCATTGTTCTCTGGGCCTTTAGAACCTGTGGCTTGTGGCTCTGCACTTTCTGAGGGATCCCCCCTTACTGAACATGAGGAAAGCAGTCCATCCCATGACAGAAGCAGGACAGTTTCAGCCTCCAGCACTGGGGATTTGCCAAAAACGAAAACCCGGGCAGCCGACCTGCTGGTGAATCCCCTGGACCCCCGGAATGCCGATAAGATTAGAGTTAAAATTGCAGACCTTGGAAATGCTTGTTGGGTGCATAAACACTTCACAGAAGACATCCAGACGCGTCAGTATAGATCCATAGAGGTTTTAATAGGAGCAGGTTACAGTACGCCTGCTGACATTTGGAGTACGGCATGTATGGCATTTGAGCTGGCAACGGGAGATTATTTGTTTGAACCACATTCTGGGGAAGACTATTCCAGAGATGAAGACCACATAGCCCACATCATAGAGCTGCTAGGCAGTATCCCAAGGCACTTTGCTCTATCTGGAAAATATTCTCGGGAATTCTTCAATCGCAGAGGAGAGCTGCGGCACATCACCAAACTGAAGCCCTGGAGCCTCTTTGATGTACTTGTGGAGAAGTATGGCTGGCCCCATGAAGATGCTGCACAGTTTACAGATTTCCTGATCCCGATGCTAGAAATGGTTCCAGAAAAACGAGCTTCAGCAGGCGAATGCCTTCGGCATCCTTGGTTGAATTCTTAGCAGATTCTGCACTCACCCATTCTGATCTGGCACATGTTGTCCAGTGCATTGGCCCTAAAGGGGGACTCTCATTCTTAACAGGATTACAAGTGAGCTGGCTTCATCCTCAGACCTTTGTTTTGCTTTGAGGTACTGTCATTTGACGTTTCGCTTCTTGTGCACTGTGATCCTGGGGAAGGGCAGTCTTGTCTTCAGCTTAGTAGTTTACTGACCCACTTTTCTTCTGAAAACAATAACATGTCTCTAAGCATTGTTTCTTGTGTTGTGTGACATTCAAATGTCATTTTTTTTTGAACGAAAAATACTTTCCTCCTTGTGTTTTGGCAGGTTTTGTAACTATTTATGAAGAAATATTTTAGCTGAGTACTATATAATTTACAATCTTAAGAAATTATCAAGTTGGAACCAAGAAATAGCAAGGAAATGTACAATTTGATCTTCTGGCAAAGGGACATCATTCCTGTACTATAGTGTATGTAAATGCACCCTGTAAATGTTAATTTACATTAAATATGGGATGGGGACTCAAATTTCAGAAAAGCTACCCAGTCTTGAGTGCTTTGTAGCCTAAGTTGCATGTAATGGACTTTTAACTGCTCCAAGGAGTTGTGTAAACTTTTCATTCCATGACAGTCCTTTTGCATTGGATTTTAAACAACTGGCTCTAGGTTATGTCATTCCCTGTATGGCACTTTAAAGAAAGGACATGCTTCTCGTTCTGAAATACACATCATAGTTTAGTGGTCCCATTCGTATTTTTGCATATTTTTTATTAAAAGTACTTTTAAGGAAAAAGAGCAATTTCCCTTTAAAAATGTGGTGGCCCAGTACCACGTGCTGTTGCTTCCTCCAGGCACTGTAAGGTAAACTCTACATAGATTAAATTGGACATGAGAAACATGTTCAGTGTGTGGGATGAAAAAATACACGTATATTTTTTGGAAAAGCTTATTCATGTCTGTCTAGAACCAAGGTATGGTATATACAACTTGCAGTGCAATGGGAAGAAAGAATACTAACATCTCAGAGAAAACAGGGACAGCATTCATTCCAGAGACAGTTCTGTGTGTGGCTACAACAAATTTTACTAGCTTTTTCATTGTCTTTCCACGCATTGAAGTTGAGAAAATGATTTTCCCTTTGCAGGTTGCACACAATTTTGTTTAAGCATTTCCTTAAAATTGTAGAATCCAGGACACAAACCATAGTAGGCAATACAATTTTAGAATGTAATATATAGAGGTACATTTAGCCTCTTTTAGAAATCAGTGGATTGAATGTTTTTTTTTTTAAATTTTACATTCCTCAAGGTGCCTCGTTTTTCTTGACTTTGTCCATTAACATTTATCCATATGCCTTTGCAATAACTAGATTGTGAAAAGATAACAAGTGTTGTAACAATAATCCATTGTTTGAGGTGCTTGCAGTTGTCTTAAAAATTAAAGTGTTTTGGTTTTTTTTTCCCAGACATTGCCTTGGTCATTGGCCTGTATTTGAAGTGATAGAAACAAACATTTGCTATCCTTTTAATGTAGTATAACCAGAATTAAAGGAAATATCAGCATTCCCGTTGAAAGAAATGTAGAACATGCATCAAGGCTTAATATGAGGAAAACATTCATTGTTTGTAAGGGGTATGACAAGGGTCTAGAAAACATGCTGTACTATAGATTCAGTACCTAGAATCTCTGTGAACCTTTTCCATTCATATTTCATCAAAAACATGCTGATTACATTTTGAGCATTGTCAGTTTTATTTTTTTAAACTATTCACTGTGAAGGAATGAGACACGCAGTTCTCTTCGGAGTCAGCATTAGATCGTATTGCTGTGAGGTGGAAGATCGCATTCATTTATGTGATATGAATGCTAAATTTTTCTAATGAGGCTGCAGGTTACCTTGTAGGTTCTGTGAAAGATAGTGGCTGTAGACCAGTGATGCCATCCATGACGTGCACAGGAACCATTCTCACGAGAACCACGGAATACATGTATGTCTTCCCTAAGTCTGTAAGAATTTTTATCAGGGTTATAGCACACTTGAATAGTTTGTCTAATACAGTTTTGGCCCATGTTAGAAAACAGTCTAGGTTATTATTACTTTTGTTAGGATCTGTCACTTATAAAATAGCCTACTAGTTTACAAATGTAAAAGCAATTGTTCTAGAAATATACAAGGGTATTAGGTATACTTTGGTTTTTAGCATATTCTTGGTGGCTTGATGATGATGAATGCATATAAGCTCAATGAGAATCACTGGTTATGCAAAACACTATAGCCAGCTCAGTGATTTTAGTTGAATGTCCTATCTTTTCCTTTCTCTAGTCTGTGTGAAGTCTTCATGGAAAATGACAAGCAGTGGATCACATATGTGATTATAGCAGATTCACAAGCTGGCTGGCTGGAAATTAGGACTGCCCCAAGGCAGAGGAAAAGTGGATATAGGAGCTTCAGAAAAACATAAACTTTCTAGGTGAAAACTGATTTACTAACTTGCTTCTTCCTGTACTTGGATCATCTATAGCTAGCTAACCAGGATAAACTACTGTTTTTCTATTGAGATACTTCTTAAATTCCAGTTTTCTCCCATTACTTTTTTAGAGATTAATGGAGTTTACAGAAAGGCTTCTGTATACTTATGTAGTAGGCAAATATAAAACTATGAGGGATTAAATCTTCAGAACAGTCCTTTTAAAGAAGTGTGAATACTGATAATTCATTATGGGACTTTGTCTTCTGTTTAAAACTATCAGTCAGGCGGTAGATGATGTAAAGCTGTTTCTTCTCAGATGTTTCTTTAGTGAATACCGTAAGTAGAATTTTGTCTGCTGATCAAAGAGGGCAAAGCTGACCTAAGTTCTTTTAAAATTTTAAGATGATCAGGATTGAGCCCTAAGCAAAGCTATGTTAAGGTAGCTATTTTTAAAAGGAAATGGAAATTAAAAGTGTAAAACATATTACTTGTCAATCT EMBV3_37136 TAGCTCATACAATGGCTTGCCTCCCAACGTTTATGTCTGCACTGGGCCTGACTCTGGACT Gene GeneID:532324|CHML:XM_002693957:143_cdna Constitutive 0 NULL GeneID:532324 16 GENE CHML NULL choroideremia-like (Rab escort protein 2) EMBV3_36092 CTCCCATGTCCTAACCAAGGAGGAGTTGACATAGCAAATAGCACAGTCCTCAACTATGAA Gene BVV0101_037287 + 0 NULL GK000018.2:18608196-18715169 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32525 CTGGAGGATGGGGAGGTGTCTAAAGAACAGTGAAGAATGAAAATCTGGAAAACTTGGAGG Variant GeneID:506714|MGC133692:NM_001038509:2_cdna 185^281 2 EMBV3_10620 GeneID:506714 9 GENE MGC133692 NULL hypothetical LOC506714 EMBV3_05054 TTTTTTAGTTGCAGTATCCACCATGAAGTGTGTCCACCACGAGCCACGTGACCTCGATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06722 AATAATAATTTGGTATATTATACAAGCTAGTAGATGTGGCACAGCAAACTGTATAATAAA Gene GeneID:615849|RAB4A:NM_001038685:11_cdna Constitutive 0 NULL GeneID:615849 28 GENE RAB4A MGC134073 RAB4 RAB4A, member RAS oncogene family EMBV3_00856 TCCTTGTGGCATGTCAGTCCCCACACTTCCTTCATTCTGTTGCCCTTTCTTGAGCTGGTC Gene GeneID:786496|ZNF318:XM_002697298:133_cdna UTR3_Alt 2 NULL GeneID:786496 23 GENE ZNF318 NULL zinc finger protein 318 EMBV3_30848 ATGTTGATGGCCGCCCTGTCCAGGATTATTTGTCTTTGAGCTCCGCCCTCTCCCATGTCT Gene GeneID:528832|DHRS1:NM_001046294:176_cdna Constitutive 2 NULL GeneID:528832 10 GENE DHRS1 MGC137104 dehydrogenase/reductase (SDR family) member 1 EMBV3_41323 TGACCACCATTGGGTTCGGGGACATTGGGCTGGAACACCCTCACTTCTTCTTGTTCTTCT Gene GeneID:538791|KCNK18:XM_002698535:201_cdna Constitutive 0 NULL GeneID:538791 26 GENE KCNK18 NULL potassium channel, subfamily K, member 18 EMBV3_02208 GCTGAAGCCAGGGTCCCCACAGAGATTTGGAAAGGAATCAAGAAACGGCAGAGAGACTGA Gene GeneID:508714|C25H16ORF42:NM_001098911:102_cdna Constitutive 1 NULL GeneID:508714 25 GENE C25H16ORF42 MGC159570 chromosome 16 open reading frame 42 ortholog EMBV3_19436 GTTCATGACTTCGACCAGCGACTACGAGGTGTAATCAAGACCCGATATACAGTGTCAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13413 TAAATACTTCAAGTCATTCAAAGACAGATGACAAACATCATATCTGAACTAAGTAAATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27520 TTCTCCCCTTCACTGTCTGCGAACCAGCTCCCTGACCAACTCTGTCCTTGATCGAAATTT Gene GeneID:504477|NCAPH:NM_001034213:29_cdna Constitutive 1 NULL GeneID:504477 11 GENE NCAPH BRRN1 MGC127159 non-SMC condensin I complex, subunit H EMBV3_11792 GCCCCATGCGTCCATTTACCTACATGTTTTTGGGAGTTGTCTTTCTGAGCCCCAAGTCTC Gene BVT0102_243294 + 1 EMBV3_39593 GK000017.2:2567621-2650459 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28281 ACTCAGTGCCAGCCCCTGTATGCCAGCTATTGTACTGCACTAATGTACTTCTCAAGGTAC Gene GeneID:511299|SETMAR:NM_001075508:35_cdna Constitutive 1 NULL GeneID:511299 22 GENE SETMAR MGC139682 SET domain and mariner transposase fusion gene EMBV3_27624 GGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGGCAAACTTTTTT Gene BVV0102_223637 + 0 NULL GK000004.2:65492591-65670542 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00166913 TCONS_00238581 TCONS_00129710 TCONS_00118490 TCONS_00012285 TCONS_00059696 TCONS_00250599 TCONS_00040981 TCONS_00198907 TCONS_00165977 TCONS_00125637 TCONS_00118456 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00031886 TCONS_00133817 TCONS_00233473 TCONS_00234240 TCONS_00246739 TCONS_00087729 TCONS_00174808 TCONS_00196823 TCONS_00223565 TCONS_00118491 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251851 TCONS_00251720 TCONS_00132067 TCONS_00082029 TCONS_00145750 TCONS_00072261 TCONS_00055707 TCONS_00082022 TCONS_00205117 TCONS_00056184 TCONS_00174805 TCONS_00228570 TCONS_00023655 TCONS_00204211 TCONS_00171428 TCONS_00207933 TCONS_00174806 TCONS_00188145 TCONS_00031972 TCONS_00059695 TCONS_00238985 TCONS_00160961 TCONS_00188520 TCONS_00118487 TCONS_00232824 TCONS_00089291 TCONS_00002600 TCONS_00199364 TCONS_00207485 TCONS_00229794 TCONS_00031759 TCONS_00070976 TCONS_00099018 TCONS_00209974 TCONS_00000529 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00251625 TCONS_00246740 TCONS_00220566 TCONS_00118459 TCONS_00118040 TCONS_00210913 TCONS_00239997 TCONS_00204210 TCONS_00205113 TCONS_00019195 TCONS_00010963 TCONS_00252081 TCONS_00037569 TCONS_00216950 TCONS_00241019 TCONS_00110425 TCONS_00123823 TCONS_00001867 TCONS_00110449 TCONS_00174809 TCONS_00242064 TCONS_00090382 TCONS_00162767 TCONS_00018601 TCONS_00132066 TCONS_00250671 TCONS_00080713 TCONS_00022895 TCONS_00107436 TCONS_00118488 TCONS_00092544 TCONS_00198905 TCONS_00078426 TCONS_00087730 TCONS_00241565 TCONS_00170890 TCONS_00018602 TCONS_00065412 TCONS_00092546 TCONS_00010280 TCONS_00205125 TCONS_00004603 TCONS_00228562 TCONS_00056149 TCONS_00221350 TCONS_00125692 TCONS_00027918 TCONS_00176866 TCONS_00118489 TCONS_00228563 TCONS_00092545 TCONS_00001866 TCONS_00006385 TCONS_00218901 TCONS_00009619 TCONS_00006741 TCONS_00007850 TCONS_00197281 TCONS_00001865 100 XLOC_105290 XLOC_072622 XLOC_101749 XLOC_145248 XLOC_078423 XLOC_072644 XLOC_007831 XLOC_036486 XLOC_153542 XLOC_024793 XLOC_120560 XLOC_100817 XLOC_077179 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_018131 XLOC_081223 XLOC_142955 XLOC_143719 XLOC_151107 XLOC_052579 XLOC_104695 XLOC_118488 XLOC_136865 XLOC_142312 XLOC_069472 XLOC_154792 XLOC_154661 XLOC_080699 XLOC_050894 XLOC_044030 XLOC_033515 XLOC_124587 XLOC_033987 XLOC_138527 XLOC_014322 XLOC_124371 XLOC_103815 XLOC_126448 XLOC_114188 XLOC_018217 XLOC_145651 XLOC_097854 XLOC_114563 XLOC_142307 XLOC_054076 XLOC_000643 XLOC_121017 XLOC_126001 XLOC_139288 XLOC_018004 XLOC_042752 XLOC_059261 XLOC_128485 XLOC_000141 XLOC_120473 XLOC_103679 XLOC_154566 XLOC_133883 XLOC_072206 XLOC_129423 XLOC_146662 XLOC_009875 XLOC_006514 XLOC_155022 XLOC_021418 XLOC_131385 XLOC_147683 XLOC_066329 XLOC_075375 XLOC_000454 XLOC_066353 XLOC_148728 XLOC_055163 XLOC_099648 XLOC_009288 XLOC_153614 XLOC_049597 XLOC_013565 XLOC_063346 XLOC_056919 XLOC_120558 XLOC_047314 XLOC_148229 XLOC_040131 XLOC_005831 XLOC_001070 XLOC_138526 XLOC_033952 XLOC_134666 XLOC_077234 XLOC_015372 XLOC_106640 XLOC_001948 XLOC_132220 XLOC_005172 XLOC_002303 XLOC_003410 XLOC_118943 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_18401 TTCTGAGATGCAGTGAGAATAGTGAGGCCATCAACCATGTCATCCCCAACGGGAAGTCTG Gene GeneID:282362|SLC5A3:NM_174607:22_cdna Constitutive 0 NULL GeneID:282362 1 GENE SLC5A3 SMIT solute carrier family 5 (inositol transporters), member 3 EMBV3_33163 AAAAGTTGTGGAGTGCATTGATCATAAAGCTTTTGCACAGTAATAAGTTGACTCACACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42432 GGGATGCAAAATGCCCACGGAGATCAAGCTGCTGGGGGAAGTGTTTACGTCTCTCTAAAC Gene GeneID:100124521|SLC25A37:NM_001102555:2_cdna UTR3_Alt 1 NULL GeneID:100124521 8 GENE SLC25A37 MGC155035 solute carrier family 25, member 37 EMBV3_26633 ATCTAGGGCTTCCCTGGTGGTCTAGTGGTTAAGAATGCAGGGGACAAGGGTTGCATCTCT Gene BVT0102_116946 + 0 NULL GK000025.2:28028659-28034287 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43553 TGGAGTTCGACGAGGAGACCCTGTACTATGTGAAGGTGTACCTGGCACTTGGCAACATCA Gene GeneID:100300032|LOC100300032:XM_002688481:13_cdna Constitutive 0 NULL GeneID:100300032 6 GENE LOC100300032 NULL hypothetical protein LOC100300032 EMBV3_11896 GATGTGATCCTACTGACAGCTATTGTGCAGGTGCTCAGCTGTTTCTCCCTCTACATCTGG Gene GeneID:507222|TMEM208:NM_001034285:129_cdna Constitutive 1 NULL GeneID:507222 18 GENE TMEM208 HSPC171 MGC127999 transmembrane protein 208 EMBV3_42491 CTGCGGGGACACTCGCTTCAACAACATCTATGGCCTTGCTGTGGCCATGTTCATAGTAGT Gene GeneID:513682|LOC513682:XM_002693387:21_cdna Constitutive 0 NULL GeneID:513682 15 GENE LOC513682 NULL similar to olfactory receptor, family 52, subfamily K, member 1 EMBV3_08682 GGTTGTAAGTCATGAATGGAAGGAGAAAGGGGACAGAATGAGAGGAAGAATCAGCATCTG Gene BVV0102_129354 + 0 NULL GK000028.2:16700835-16729024 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160221 TCONS_00160223 TCONS_00160230 TCONS_00160224 TCONS_00160229 TCONS_00160225 TCONS_00160231 TCONS_00160226 TCONS_00160228 TCONS_00160232 TCONS_00160227 TCONS_00160222 1 XLOC_097610 Coding TCONS_00160232 XLOC_097610 Coding Coding RHOBTB1 28:16727299-16809553 j TSS119889 5203 1 TCONS_00160232_9 698 10 0.936865524661714 4.62183907504736e-05 0.000126661717364613 9.32676096995711e-05 0.000236922408803494 7.29926759803942e-05 9.78833497442977e-15 0.000240040529597322 0.000621342526252777 4.21327623760851e-05 3.20163363708346e-245 8.9253820162823e-58 1.69756863124137e-215 5.70839842719724e-29 2.36026592168231e-36 7.85104912581586e-05 8.65563100604993e-38 2.22328833028579e-47 1.39632195502155e-22 0.000642948628391595 9.95830254743628e-05 1.30499840488716e-71 1.28962482733879e-189 8.04923590069291e-33 8.99245084962603e-34 0.000649519244409013 0.00041774193063518 0.000375505175270395 5.28993708640981e-44 1.44474749641904e-17 2.89656596922514e-54 XM_005226302.1 RHOBTB1 PREDICTED: Bos taurus Rho-related BTB domain containing 1 (RHOBTB1), transcript variant X1, mRNA. 0.0 7440 100.00 0.792619642513934 NM_014836.4 RHOBTB1 Homo sapiens Rho-related BTB domain containing 1 (RHOBTB1), 0.0 4868 85.95 0.792619642513934 TCONS_00160232_9 sp|O94844|RHBT1_HUMAN RHBT1_HUMAN Rho-related BTB domain-containing protein 1; 0.0 1318 93.70 0.998567335243553 3 coding 0 0 0 0 0.137729540148897 0.292685656023015 -0.0136892339375878 0.807157009063215 AGGTATGATTCACAGCTGACATCAATTCCCAATTAGTCAAAACTTCATACAGCTGGCCTCCTGAGGCTAAAGGGTCTTCTCGTTACCCAACTGAAAGTGATTCGGGCAAAGCCTGCCTGTGGTACTGGGGAAAGGGGTTCCTGATGCAAGGTTATTCCATGTGGATATCAAAGCCAAGAGAAATGAGGAGGGGGCCCCGGATGGAATGCTGAACAGCGTCAGGTCCCAGAGCAGTCTGACATCTGGGAGAAACACCTACTCCGGTGGAAGTACTAGAGATCCAGAATACAAGTTTCAGGAGAAACAAAGGGTCTTCGGAGGGTCAGGTCATTTACTTCCCCACTAATAAAGAGCCCCAAACAGGGTCTGTCTTTCCTTTCTGCCACCATTCGCTGGAGAGGCACACAGCCTCCTGCCTGCTCCGTCAAGACTGACCCCACTGCCTGGAGGTGAGAGCCATAGCCGTGGTCGTTCCGGAAAGCCAGCGTGCAAGACAATTTGGATAAAGTCATCCCTAAGCCAATGCTTAAGTCCAGTGCCCACGGGCCTTACTTAGTTCTCTAGTCCAGATGCATTTCTTCAAAAGCCAGCATACCCCCTTTACTACATCTCCAGCCACCTGATCTGTAAAGTACCGCAAAGTTGTTGGCTGTTCCCCTGTTAACTCTGGGAATATGCTCGGGCAACTGTTTTTCATTATCTTTCTACCAAACTCCTTAAAATAGGTGCATGTCTTCAAACACTGGTAGTGCTTGTCCATGAAATTTGCTGCCTAACACCTGGAACTTGCCATCCAGGATGACATCCTTTAAACAGCCAAGTACAACACCCCATTCTGCATCCAAGAAGGCGATGAATGGTCCGCACAAACCAAGCCTCGCTCAAGCTTCTTGCAGTCTTAGCTGCATCCCTGGCTCAGATCGCCGGAAGTGGCCTCTGCGCCTGCACGGAGGCGGGGTCTGAACTAGTTCGGCAGTGGCCACGTGACAGCCAGGTTCTGCGGGTCGGTTACCGACAGATGAGGAGTAGGTTTATTAAATAATAGAGAAAGACCCTCTCTAAAGGAGTTTTATAGTTTTATAAATGGACGCTGACATGGACTACGAAAGACCCAACGTGGAAACCATCAAGTGCGTGGTTGTGGGAGACAATGCTGTGGGGAAGACACGCTTGATCTGCGCCAGAGCATGTAATACAACGCTGACACAGTACCAGCTGCTGGCTACCCACGTCCCCACCGTGTGGGCCATTGACCAGTACCGAGTCTGCCAGGAGGTCTTGGAACGTTCCCGGGATGTCGTTGATGAAGTGAGCGTTTCTCTCAGGCTTTGGGACACTTTTGGAGATCATCACAAAGACAGGCGTTTTGCATATGGCAGGTCCGATGTTGTGGTCCTCTGTTTTTCGATCGCTAATCCCAATTCCCTAAATCATGTGAAAACCATGTGGTATCAAGAAATCAAGCACTTTTGCCCTCGCACACCTGTTGTTCTAGTTGGCTGCCAGCTAGATCTCCGCTATGCTGATCTTGAAGCTGTTAATAGAGCCAGACGCCCTTTAGCAAGGCCCATAAAGAGAGGGGATATTCTGCCCCCAGAAAAAGGCCGAGAGGTTGCAAAGGAACTGGGTATACCCTACTATGAAACAAGTGTGTTTGACCAGTTTGGCATCAAAGACGTGTTTGACAACGCAATCCGAGCGGCGCTCATTTCGCGACGGCACTTGCAGTTCTGGAAATCCCACCTGAAGAAAGTCCAGAAACCTTTACTTCAGGCACCATTCCTACCTCCAAAAGCCCCCCCACCGGTCATCAAAGTTCCAGAATGTCCCTCCACGGGGACGAACGAAGCTGCCTGTTTACTGGACAATCCTCTGTGTGCCGACGTCCTCTTCATCCTCCAGGACCAGGAGCAGATCTTTGCACACCGAATTTACCTCGCTACCTCCTCTTCCAAGTTTTATGATCTTTTTTTAATGGAATGTGAAGAAACCCCCCACTGGAGTGAAGGAGCTTGTGAGAGAGAGAAGCAAAGCAGGGATTCCCAGGAGTGGGCACAGAGTCTTGACCCAGATGAGGAAAGGGAAGAGGGCACCCCAAGGACGCCTCAGGCTGATCAGTGGACCCCCTCGAGCCAGAACCTGTCCCAACAGGAGACCCTGGGGCTGGACGCTGAGGACCTGGTGGCAGAGACACAGACCCTGTTGGGCTGGAGCAAGGGGTTCATCGGCATGCACAAGGAGATGCAGGTCAACCCCGTCTCAAAGCGGCTGGGCCCCGTGACCGTGGTCAGGATGGATGCGTCCGTCCAGCCAGGCCCTTTCCGGACCCTGCTCCAGTTTCTCTACACGGGGCAGTTGGATGAAAAGGAAAAAGATCTGGTGGGCCTGGCTCAGATCGCAGAGGTCCTGGAGATGTTTGATTTGCGGATGATGGTGGAAAACATCATGAACAAGGAAGCCTTCATGAACCAGGAGATTACGAAAGCGTTTCATGTCCGGAAAGCCAATAGGATAAAAGAGTGTCTCAGCAAGGGGACATTCTCAGATGTGACATTTAAGCTGGACGATGGAGCCATCAGTGCCCACAAACCGCTGCTGATCTGTAGCTGCAAGTGGATGGCTGCCATGTTCGGGGGGTCGTTTGTCGAAAGCGCCAACAGTGAGGTATATCTCCCAAACATAAACAAGATGTCAATGCAGGCAGTCCTGGATTATCTCTATACTAAGCACTTGCCACCTAACTTGGACCTGGACCCACTGGAACTAATTGCCTTGGCAAACAGATTTTGCCTGCCACACTTGGTTGCACTTGCAGAACAGCACGCCGTCCAGGAGCTGACCAAGGCCGCCATGAGTGGTGTGGGCATCGATGGGGAAGTTCTCTCTTACTTGGAATTGGCCCAGTTTCACAATGCCCACCAGTTGGCCGCCTGGTGTTTGCACCACATCTGCACCAACTACAACAGTGTCTGTTCCAAGTTCCGCAAGGAGATCAAATCGAAATCTGCAGACAACCAGGAATACTTTGAGAGGCACCGCTGGCCTCCTGTGTGGTACCTGAAGGAAGAAGACCACTACCAGCGTGTGAAAAGGGAAAGAGAGAAGGAAGACATTGCACTAAATAAACATCACTCGAGAAGAAAGTGGTGCTTCTGGAATTCATCTCCAGCGGTCGCCTGAGGTGGAAGAGGAAAAAAAAAAATCAAAAATCTGACACGCCACTCAAAAGCACTACTGTAAAATGAGTCTTATTTTTAGAGATAACATGTAGTTCAGGTTTCAGGCACTGATCTTCCTCCACTTTTGTGCATTTATCTTTGTTGGGATCAAAGCACAAGCTCACCATCAATGAGCCTGGACAAAAAGGGAAGTTGACGCTCACTGCATTCCTTAAACTTATATGTATATTTTTTGTTAGAAGGCTTAATAAACTTTAGTCTGGTATCTCATTTCTTTTTATACAAAGGAAAAAAAAAAATCCAGCTTTCATGTTTCAAATTCCAAATTGGAAAATATTTTTATACGGTCTCTTGTAAATGAAAATACTGTGTATTACTTTATTTTACAGGACACACATTAACCATGAAGTCGCCCTGCGATTCTCTTTGCCCACGAGCATTATTACTTAATTAGAGGGATATCCTTTTGTCGTGAAGTAAAGGGTTGGAATGAAATTCCCCAAAGTACAAGTTAGGGAGGGTTTCATCTTTGTTCTGCCGAATAACACTGGTATAATTACCAAGTCAACTCCAAGAATGTGTATTTACAATATTTGCTATGTAAGTGCTAGTAATTATATGGTTATATGTGCCATGTAAAATATAGTGATATCAAATCTTCTGTTGTTTAAAATGTCTAGATTTAAGAGGATAATCTTTATAATCATTAGAAGGGCTTATTAAATCCCAGCATTATCCAGGGCAAACTCTCTGGTGGACCTGAATACAAAAGATACCACAGGAGCGCTGGTGTTTGGATTGCTGTATGAAGGTGTCCGTCTCTCAGTGTTCCTTGATCTTGCCATGTTTCTGCATGCAGTTTTGCCACTGACTTGAATCGAGATGGGCAAGGGTGAGGGTCCCCGGACTCTGTCCCCTCATCTGCAGACTTGTCACATCTCCCCACCAGAAACAGGCTTCCTCAGGTCTCTCACCTGCGGCCAACTTCACTTTGTAAGACCCATGTTTTTAACTCTTCCCAGGGAAAATTCACGTCGCTGCAGAAGTAGACCAAGGCAGACCACCCACCCCTGCTGAAGTTCAGTTGGAGGGCCTGTGAAGGCACAAAGCTGGAGGCTGGGTCGTCTAAGGTCACTGCATTCTCCAACGCAGACGGGAATTTTACTCCAGAAGTCTAGGAAATGGTGCTATTGTGAGTTAGTTCTGACCCTTTGTCATTCTGAGTTTTCAGTGTTAAAATAGAAAGTATTGAGCAGGGGGGCTTTTGAGAGGCCATCAATCACTGCTTCTCTGTAAATTAAAATGTTACAGCACTCACACAGAGCATCTTAAGGTCACAGTTCCATACCTGTTTTGGGATGTTGTGTGGTGGAGGCTCGGGCTTATTCTATTCAGAGGTCAATTTAATGATACTAAAAGCTGTTGATTTTTTTTTTTTTTTTCTAGCCTTCAGAAGTTAGAAAAGAGACAGTTGAGTCCAAACTCCAATGTTAACAACCACATATATTTGAAAATCTATCCAGATTACAGATAAGTGCTTATTACTGGCCGTGGATACATACTAGTTAGCAAAATTGGGAGAGGCCCAGAAATGTTCTCACTCTCTCATGACAAAGGACTGGGCAGTAGTGTTGGGAAGGATGGGATGATTGTAAATGCATCTACCTTAATTTTGGGTCAATAGGTTGTAAGTCATGAATGGAAGGAGAAAGGAGACAGAATGAGAGGAAGAATCAGCATCTGTCCCATCATAGAATGGTAGAAGTTGAGTTTTCGATGAATAGTCAGAGTTGAATTTATACAACCAAAGCTCCCATGTGATTGTAATCTTGCCAAAATGTAATGGACATATAAATGAACCTGGGGTATAAGCAATAATATCCACTAGTGTTATCAGCTACTGTAACCAAGTGGCTGGTTCATTTGGTTGACGCTGATTATGGCCTTTAACTATGGTGGTTTGTTTTGTGTTTTGTTTTTTATTTCACAAAAAGCCAATAAAATTGTTTAGCTATAAAATGCCT EMBV3_03184 GCACTTTCACATAAAATTGATAACTAATCAGAAGCTGCAGGGAACGCTCCTCAGCGCTCT Gene BVV0102_211702 - 1 EMBV3_16693 GK000017.2:7728306-8880538 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02946 AATAGTCTGTGTGAATCGGCAGATGGCATATTGTGCTCGGGAAAGGGCTCCTGCCACTGT Gene GeneID:533449|ITGBL1:XM_002691974:50_cdna Constitutive 0 NULL GeneID:533449 12 GENE ITGBL1 NULL integrin, beta-like 1 (with EGF-like repeat domains) EMBV3_31236 TCCGCCCCCATGCACCCTGCCCCACTTCACAGGCTTTGGGGATCCATTCCCTTTAAAACA Gene GeneID:540310|GRLF1:XM_002695104:568_cdna Constitutive 0 NULL GeneID:540310 18 GENE GRLF1 NULL glucocorticoid receptor DNA binding factor 1 EMBV3_22529 GGTGCCAACTGGAGTCTTGGTAACAAATGGGATTGCACAAATCCACGGTATTTAGCTGCA Variant GeneID:505510|RABL3:XM_002684805:179_cdna 690^840 1 EMBV3_07909 GeneID:505510 1 GENE RABL3 NULL RAB, member of RAS oncogene family-like 3 EMBV3_05457 GTTTACCCTCTTCCGTCACTAGGAAAACACCAGTCAAGCCGCAATGAGATACCACTACCC Gene BVT0102_043847 + 0 NULL GK000020.2:66609978-66681684 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40196 TCACGTTGGTACTCTTCCTGCATGATACCGGAGGAGGCCAAGGAAGAGCAGACAGCCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39890 CACTGCAGCAGGGGTCATCAAGATGCTCTGGGGGTGTATTGCATACCTTCCAGTTTTCTT Gene GeneID:100295762|LOC100295762:XM_002693101:485_cdna Constitutive 0 NULL GeneID:100295762 15 GENE LOC100295762 NULL hypothetical protein LOC100295762 EMBV3_41101 GCCTGTTGTTCATGATTGGGGAAGTCATCGAGATTCTGGGTGCCCTGCTCTCTGTGCTGT Variant GeneID:511061|SLC30A2:XM_002685704:380_cdna 266^412 1 EMBV3_17374 GeneID:511061 2 GENE SLC30A2 NULL solute carrier family 30 (zinc transporter), member 2 EMBV3_06291 CTTCAGGCATCGCTGGAGCATTTCAAAGAGAACACGAGCGGCTCCGCAAGTACCACTGAA Variant GeneID:506492|ATP5J2:NM_001113719:104_cdna 133^249 2 EMBV3_10883 GeneID:506492 25 GENE ATP5J2 MGC133672 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 EMBV3_34035 AAGAGATGGCCATCAGTGACTGCAGCAAAGAGATTACCTAAGCAGATTGAAGAACGCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36574 AAGAAAGAGGATACAGAAGTCTCTACTCAAGACTCCATGCCTCCCACAGTGGAGTCCAAC Gene GeneID:782977|LOC782977:XM_002688139:33_cdna Constitutive 0 NULL GeneID:782977 6 GENE LOC782977 NULL similar to pol protein EMBV3_04840 TTCCTGGGCAAGACACCTCTGCTATGCTTTCGCCCTTTTCCCTCATGTAAGACAGCAGTT Gene BVV0102_241871 + 0 NULL GK000011.2:37182429-37219620 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26597 CTCTGCTGGCTTTGGCATATACACAGGTGGGCTTGGGCATTAGTACTCTGCTGATGTATG Gene GeneID:517811|COX15:NM_001076861:150_cdna Constitutive 0 NULL GeneID:517811 26 GENE COX15 MGC142715 COX15 homolog, cytochrome c oxidase assembly protein (yeast) EMBV3_31077 GCACTGATAGTGATAACAGAATTGAAACTGATGCAGGAAGTGGCAAGAAGGGAGATGCCA Variant GeneID:512403|LRRC36:XM_002694819:691_cdna 578^705 1 EMBV3_19890 GeneID:512403 18 GENE LRRC36 NULL leucine rich repeat containing 36 EMBV3_30341 TAGTATCCTAGAAGGTTCCCTCATGCCCATTCCTAACCAGGACCCCTTGTCCCCAGAGAA Gene GeneID:519670|KIN:NM_001101099:11_cdna UTR3_Alt 1 NULL GeneID:519670 13 GENE KIN NULL KIN, antigenic determinant of recA protein homolog (mouse) EMBV3_03463 CTCCTTAATCCAGGGACAAGAAGTGGCTGAGAAGATAAATGCATCACCACAAAATTCTGC Gene BVT0102_166705 + 0 NULL GK000011.2:21318758-21332926 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027195 TCONS_00027190 TCONS_00027192 TCONS_00027193 TCONS_00027191 TCONS_00027194 1 XLOC_015201 Coding TCONS_00027192 XLOC_015201 Coding Coding SOS1 11:21329551-21460602 j TSS19334 8419 1 TCONS_00027192_4 932 22 0.935925219381915 3.38483483715885e-12 0.000174046186259385 1.89328910480227e-08 0.000192069335622527 6.40726977510317e-05 3.84211552188394e-09 2.6331648669288e-05 0.000226868900432716 0.000394862743405671 6.97638043261799e-05 4.68774939550943e-05 1.1915714854555e-05 3.48031740859887e-09 1.28265159465513e-05 0.000110245112786511 0.000707281642010373 0.000215241607083869 0.000335620196429471 7.35016948590958e-09 4.21811406721404e-12 3.61930481472292e-12 0.000299067418407202 0.000447945123389929 0.000770059016426098 3.03417289345836e-19 6.57163682377628e-14 0.000301784848212607 1.33819367215485e-05 1.4786927943077e-09 8.71372908049882e-05 XM_005212708.1 SOS1 PREDICTED: Bos taurus son of sevenless homolog 1 (Drosophila) (SOS1), transcript variant X2, mRNA. 0.0 1.517e+04 99.92 0.99988122104763 XM_005264515.1 SOS1 PREDICTED: Homo sapiens son of sevenless homolog 1 (Drosophila) (SOS1), transcript variant X1, mRNA. 0.0 9340 91.05 0.791067822781803 TCONS_00027192_4 sp|Q07889|SOS1_HUMAN SOS1_HUMAN Son of sevenless homolog 1; 0.0 1805 97.68 0.998927038626609 3 coding 0 0 0 0 0.00744418255688617 0.961263555593439 -0.00810353951115474 0.8628236881403 GAGGCGCCCCGGGGGCACCATGCAGGCGCAGCAGCTGCCGTACGAGTTTTTCAGCGAGGAGAACGCGCCCAAGTGGCGGGGGCTGCTGGTGCCTGCGCTGAAAAAGGTTCAGGGGCAAGTTCATCCAACTCTTGAGTCTAGTGATGATGCTCTTCAGTATGTTGAAGAATTAATTTTGCAGCTATTAAATATGCTCTGCCAAGCTCAACCCCGAAGTGCTTCAGATGTAGAGGAACGTGTTCAAAAAAGTTTCCCTCATCCAATTGATAAGTGGGCAATAGCTGATGCCCAATCGGCTATTGAAAAGAGGAAGCGAAGAAACCCTTTATCTCTCCCAGTAGAAAAAATCCATCCTTTGTTAAAGGAGGTCCTAGGTTATAAAATTGACCACCAGGTTTCTGTTTACATAGTAGCAGTATTAGAATACATTTCTGCAGACATTTTAAAGCTGGTGGGGAATTATGTGCGAAATATACGGCATTATGAAATTACAAAACAAGATATTAAAGTGGCAATGTGTGCTGATAAGGTATTAATGGATATGTTTCATCAAGATGTGGAAGATATAAATATATTATCTTTAACTGATGAAGAGCCTTCCACCTCAGGAGAGCAGACTTACTATGATTTGGTAAAAGCATTTATGGCAGAAATTCGACAATACATAAGGGAACTTAATTTAATTATAAAAGTTTTTAGAGAGCCCTTTGTCTCCAATTCAAAATTGTTTTCAGCTAATGATGTAGAAAATATATTTAGTCGTATAGTGGATATACATGAACTTAGTGTAAAATTACTGGGCCATATAGAAGATACTGTGGAAATGACAGATGAAGGCAGTCCCCATCCATTAGTAGGAAGCTGCTTTGAAGACTTAGCGGAGGAACTGGCATTTGATCCATATGAATCATATGCTCGAGATATTCTACGACCTGGTTTTCACGATCGTTTCCTTAGTCAGTTATCAAAGCCTGGAGCAGCGCTCTATTTGCAGGCGAAGGTTTCAAAGAAGCTGTTCAATATGTTTTACCCAGACTACTTCTAGCCCCTGTTTACCACTGTCTGCATTACTTCGAACTTCTGAAGCAGTTAGAAGAAAAGAGTGAGGATCAAGAAGACAAAGAATGTTTGAAACAAGCAATAACAGCTTTGCTTAATGTTCAGAGTGGTATGGAAAAAATATGTTCTAAAAGTCTTGCAAAACGAAGACTTAGTGAATCTGCATGTCGGTTTTATAGTCAGCAAATGAAGGGGAAACAACTAGCAATCAAGAAAATGAACGAGATTCAGAAGAATATTGATGGTTGGGAGGGAAAAGACATTGGACAGTGTTGCAATGAGTTTATAATGGAAGGAACTCTTACACGTGTAGGAGCCAAACATGAGAGACACATATTTCTCTTTGATGGCTTAATGATTTGCTGTAAATCAAATCATGGGCAGCCAAGACTACCTGGTGCTAGCAATGCAGAATATCGTCTTAAAGAAAAGTTTTTTATGAGAAAGGTACAAATTAATGACAAAGATGACACCAGTGAGTACAAGCATGCTTTTGAAATAATTTTAAAAGATGAAAATAGTGTTATATTTTCTGCCAAGTCAGCTGAAGAGAAGAACAATTGGATGGCAGCATTGATATCTTTACAGTACCGGAGTACCCTGGAAAGAATGCTTGATGTGACCATGCTGCAGGAAGAAAAGGAGGAGCAGATGAGGCTCCCTAGTGCTGACGTTTATAGATTTGCAGAGCCTGACTCTGAAGAAAATATCATATTTGAAGAAAACGTGCAGCCCAAAGCTGGAATTCCAATTATCAAGGCAGGAACCGTTATTAAACTTATAGAGAGGCTCACATACCACATGTATGCAGATCCCAATTTTGTTCGGACATTTCTTACAACATATAGATCCTTTTGTAAACCTCAAGAACTACTGAGTCTTATAATAGAAAGGTTTGAAATTCCAGAGCCTGAGCCAACAGAAGCTGATCGCATCGCTATAGAGAATGGGGATCAACCCTTGAGTGCAGAACTAAAGAGATTTAGAAAAGAATATATACAGCCTGTGCAGCTGCGAGTATTAAATGTATGTCGGCACTGGGTAGAGCACCACTTCTATGATTTTGAAAGAGATGCAGATCTTTTGCAGCGAATGGAGGAATTTATTGGAACCGTAAGAGGTAAAGCAATGAAAAAATGGGTTGAATCCATCACTAAAATAATCCAAAGGAAAAAAATTGCCAGAGACAATGGACCAGGTCATAATATTACATTTCAGAGTTCACCTCCTACGGTTGAGTGGCATATAAGCAGACCTGGGCACATCGAGACTTTTGACCTGCTCACCTTACACCCAATAGAAATTGCTCGACAACTCACTTTACTTGAATCAGATCTATATCGAGCTGTACAGCCATCAGAATTAGTTGGAAGTGTGTGGACAAAAGAAGACAAAGAAATTAATTCTCCTAATCTTCTGAAAATGATCCGGCACACCACTAATCTCACTCTGTGGTTTGAGAAATGTATTGTAGAAACTGAAAACTTAGAAGAAAGAGTAGCTGTGGTGAGTCGAATAATTGAGATTCTACAAGTGTTCCAAGAGCTCAACAACTTCAATGGTGTTCTTGAGGTTGTCAGTGCTATGAACTCATCCCCTGTTTACAGACTAGACCACACGTTTGAGCAAATACCAAGTCGCCAAAAGAAAATTTTAGAAGAAGCTCATGAACTAAGTGAAGATCACTATAAGAAATATTTGGCAAAACTCAGGTCTATTAATCCACCATGTGTGCCTTTCTTTGGAATTTATCTCACTAATATCTTGAAAACAGAAGAAGGCAACCCTGAGGTCCTAAAACGGCATGGAAAAGAGCTTATAAACTTTAGCAAAAGGAGGAAAGTAGCAGAAATAACAGGCGAGATCCAGCAGTACCAAAATCAGCCTTACTGTTTACGAGTAGAGTCAGATATCAAAAGGTTTTTTGAAAACTTGAATCCAATGGGAAATAGCATGGAAAAAGAATTTACGGATTATCTTTTCAACAAATCCCTAGAAATAGAACCACGAAACCCTAAGCCTCTTCCAAGATTTCCAAAAAAATACAACTATCCCCTAAAATCTCCTGGTGTTCGTCCATCAAACCCAAGACCAGGTACTATGAGACATCCCACACCTCTGCAGCAAGAGCCAAGGAAAATTAGTTATAGTAGGATCCCTGAAAGTGAAACAGAAAGTACAGCATCTGCACCAAATTCTCCAAGGACACCGTTAACACCTCCTCCTGCTTCTGGTGCTTCTAGTACCACAGATGTTTGCAGCGTATTTGATTCTGATCATTCAAGCCCTTTTCACTCAAGATCTGCTTCAGTATCATCTATAAGTTTAACCAAGAGCACTGATGAAGTGCCTGTCCCCCCTCCTGTTCCTCCACGAAGACGGCCAGAGTCTGCCCCAGCGGAATCTTCACCATCTAAGATGATGTCTAAGCATTTGGACAGCCCCCCAGCAATTCCTCCTAGGCAACCCACATCAAAAGCCTATTCACCACGGTATTCAATATCAGACCGGACCTCTATATCAGACCCTCCTGAAAGCCCTCCCTTATTACCTCCACGAGAACCTGTGAGGACACCTGATGTTTTCTCAAGTTCACCACTACATCTCCAACCTCCCCCTCTGGGCAAAAAAAGTGACCATAGTAATGCCTTCTTCCCAAACAGCCCCTCCCCCTTTACACCACCTCCTCCTCAAACACCTTCTCCTCATGGAACAAGAAGGCATCTGCCGTCACCACCACTGACACAAGAAGTGGACCTCCATTCCATTGCTGGGCCGCCTGTTCCTCCACGACAAAGCACTTCTCAGCATATCCCTAAACTCCCTCCAAAAACTTACAAAAGGGAGCACACCCACCCGTCCATGCACAGAGACGGGCCACCACTGTTGGAGAATGCCCATTCTTCCTGAGCTCCTCTGGACCAGGATGTACGTTTTCCTAGCCCCAGATCCATTGCTGGCGATGGATGCACTGCGTGTGCCAGCACTGAGGAGTTAAAATGAGAACTCCAAACACTAACGACTCTACTTCAAGATGCAGTCATAAGACAATGAATTTTAACACAGATGTAATTATAAAGTGAATATGGAAAGATTGATCTAGAGGAAGTGGACAACTGATTTCACCTGAAAATCAAGGAAAGGAACCTTTTGCCAGCCAGTGAGCAGAAGTCCTCTTTTTGTGAAGTGATCTGTATCATTAAAGGGATGGAAAACCGTCTAGTGTCCAGCAGGCCCACATGATGACAGTTTTTGTAATTCAAAATATTATGCACTTTTTAAAAAGAAATCTTAAACAGGGATCTTCAAATCCTCCTTTGTTTTCCTTTGCTTTTACTCGTCCTACTTTAGAATATTTTCTTAAAAATCATTCAGAGGACTGTGAGGAAAGGCTGTGGTACCTGCCCTTGTTGGAATCAAGGCCCAGCACCATTCTGCAGTCCTGTTTACAGATTATTACAGTGAATTGAATGGGTACCGAGGCTTCACCAAAGAGGTACTTTTTTTTTTTTTTTTTTAAGAATAATTATGCCAATTTTAAGAGCATCGCCCTACCCACCCTCCCTACACAAACAGAATGTGGTGGTGTTGCCTTCAAACGAAGTTTTGTGTCATTAACAATGACAGAAGAACTCTTCTAAAAACGTTTAACTGTCAAGCATATGATTTACATTTAGGAGACTGTTAATCTTTATGCTAGATTGTCATTTCCCCCCTTTTCCCACAGAAGTTTACTGGTAATCCATGTCATGGCTTGTAGCTGTCCCTCTAACCATACTGTGGAAATGCAGTCACCCGGTGGGAAAGGAGCACTTGTTGGGCGTCGCTGACACCGGTCATGTTTGACTAATAGTTGAGTGATCAGCATATCTAGAATTACCTTGCATTGCCTAAATCATGTGTATATAGTGAATGTTATATAATATACCTGGCAGGTCTGTTTTAATTTAATTGAATAAAGATACAAATACTTTGTTTGGCTGGCATATATTAAATTATTATATGGAGTAAATGGTTGATTCTTATTTCTTTCAGTTGAAACACACACACAACACTAAGCATAAGAGCACGTATTGTGGTACGCCTTGGTTTCTAGTTCTGGGTGTATGTATTCCTCTTAAAAGAATGATCTAAAGTCGCAGTTCAGCATGTAGGAAAATATTTGGTTAGAATAGGATGGGTATCTTTTAAGCAGAGCTTTGTAAGGTTTTTAATTTCCTAGGTAACATGTATTACAGTTTGTTAAAGTTTATATTAAACATTCTACCTTGCCTGAGGTCTTTGCTCTATCAGAACTATTCATAATAGAACATCTACCTACATCATTAATAGCATAATATGGATTATTCATTAAACCTATGTACTGACCTTCTGAGTCTAACAAATACTGTGACTGAAATGCATGCAACTTGTTGAAGAGAAAAAATGTTATTAATCTCCACTATAATATCTGTGAAGTGTGCAGTATTCCATCCTTAGAGAGTCATCAGTTCATCTGTATCTGCATGTGTCCTCTGAATAATGAAGTAACATTTCAGCAGTTCTGTTAACCATGCCATTAGAGGCATTTTTAGAAGTGCTGCATCATGGTGGAAACCTAGTACTTTAATAATTTTCTGTGATATTTATTAGAGCATTAAATGTACATCACGATAGTACAATATATAGTCCTTTAAGACCAGAATGTTGGTTGTATCATCATTAAGCAATCCATCCTGTCATATCCTTTCTTATTTATTTGTTAGAGTTGTATCTTTTGTTTTTAATATTTGTACCATTCCTTTTAGGGTAGCCACTTTTACAAAATGTCTCCTTTCAAAAGTCTCCCCCAAAATTTATTTCAAATCCACTCTTGTTTGCAAAGCATCCATAAGACCATTCATTCAACAAGTACTTATCTACGCCTACTTACTAGTGCTGCTACAATTAATCATAATACACATTCCAGAATTTCCATGACTTTTTATTAGACCAGCCTCATCATCCCTAGGATTTCCCTTTATGTGTCTTATGCACACTTCTCTTTAATTACCCCAACCCTAACTCCAAAGGAGAACCTGAGAAAAGTCACATTGGAGCCCATTCAGTATCCCTCTGGCCAGTGTGTTAGCCTTCTAATAAGGTAATGACCTCTTTTCAACCTGCCTGATTTTGCATAAAGAAGAAAAACTCAGATTTGAAGTTCTAATCATACTTCTTCCAAAGGGAAGTATTCTTTTACCCTGGTGGTTCTAGGCGACCGCTTCACTGTGCATCAGCTGTATATGCATTGTGGATAGAAGATATTTGTACTCTGAAGTGTAAAAGTGGGGTCAAAATATTTTCTGCAGTGGTAACTGATTAGAAAAATTTCAATTGGATGCCCTTAAACAGTGGTGAGAAAACTATCCTTGCCTTCTTCACATGTGAAGCATTAACTCACTGGCAGATTAACTCTTTGTAGTAACTGAAATCTCCTTAATCCAGGGACAAGAAGTGGCTGAGAAGATAAATGCATCACCACAAAATTCTGCTTTTGAATTCAGGACATTACAAGACAGTGCAGCATGACTTTCCTAAACCACATTCCAAAACATGGAACATTTCTTTTAGAAATGGAAATGCTCTTAGTTGTTTCATTATCTTTGGGTCAACAAAATGAAAATATTTCAAGGCTGAATTTACCTACATGGGCCAATAACCAATATAATAGAAAGGGAGGCTTTCACATCTAAGTACTTTTAAAAACAGGAACAAATAAAGTATATGTTTCTAAAGTTATTGAAAGACAGGTTATTTACTCTTTCCACATCTCCAAATGTATTTTAAGGCTACAAATGATCAGGAAATGTATAAACGTCAAAAGTTTGCTTAATTAAAGGTTTTTGGATATCAGATTATGTGTTCAGTAGGTTACTACGCTCTAACAACTCAAGAATGTTTTAATGAATCTAAATTTAGTGAAGAGCATGCCACCCTAATTATACTACAGTCAACAGAGCAGTGTAGTGAACCATACTTTTTCAGTTGGCAGCTACATTGTGGTTCCAAATTCCTTAATGTGTTTTTCCCTACATTAAAAATTAAGCCAAAAATTAGTTGGTATCTATGATCACTATCTTGTCTTAATTCTCAAATTTAGCTCACTTTAATCATGTACCTCATCGTTTGTCTTTTAATGACAGCTTAAATTGAGAGTTTTAAGTGGCTCAGCAAAACATAATGCAAATGGCGGGGGGGGGGTGGATAATTCCAGTTTATTTAGTGTTATACATATTGAGGAAAACCTATTTTTTTTTCCCCTCTAGATTCAGAAAGAAAAAATAAACCATTTCTTTCTTGGTATTCTGCTGCTATAGGTAGGTTCACTTATCTTTTAACCTATATTGTATGACTGTTGTATAAGTGTAGGTCCTATGGAGTTGCACATTAATCTTTACCAGTAAAATAAGCATCACAGGGTTAATACCAGTTTGGCTGAAAGAATTATGCAGTAAAATTATTTATAAGGGAAAGTGGTGACTTAGTTTAATTTATTCAATATTTTTCTTTTGAAGCATCTCATTACTTTTAAAATCATTTCATAATCCTTTATACATGAGCCAATGAAATATTTTGAGCTCTAAAGAAAAGCATGAAGTCTATATGATAAATCTGAACAAAAGCACTTGTAACTTGTTTTGTAAATTTCATGCCTTATTTTCCATTTTTGACACCGAAAAGTGCATTTTCTGTCAACTGTGAGCAAATTTCCCTTTTGCCTTTAATGAAAATAGTGCATTAAGTAGCCAACTGCTGCAGAATTACAGAGCAAGTTAGCTAAAGGTGGATCACATTGGACTACCACTCAAAGAAACAAGATGCATAGCAGATGGAAGTCACACGTGTGGCTTTAGGGAGAGCGCACCTGTGCCAGATGCATGCCACTTTTCAGTAGCTGCCAAATGTGCCTTTAATTAAGAACATCTCTAATTTTTTTCTTCAGATCAAGTCAGCATTTGGGGGCGGGATCAGGGCAGGGGACTCTGGGGTGCAAATATCTGGTGAAACCCACCAGAGAAGAAGCCTTCGTTTGTCAAAGTGACACGAATAACTTTAGTTGAAACATGTTTGTGTATATATATGTGTATTTGCCTTTGTTTAGTAGCACGGTTATTTGCTAAAATAATTGTCCAAAAAATTGCTCTGTCAGTCTCACTTTGATGTAAAAACAGTGCGGTCTACACATCTAATACGGCCTTTGTGCCAGCCGTGTTCGTAGGTGATCTTTGTACTCTGTGTGCAGCAGTATTTGGTTTGCATTTAAAGTGAAAATAATGGCTGTTATTTTTCTGGCATTACTAAGATAAACCGAAAAATAATAAAGAAAAATGCCTTACAC EMBV3_07790 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTATGACC Gene GeneID:526915|LOC526915:XM_002695159:752_cdna Constitutive 0 NULL GeneID:526915 18 GENE LOC526915 NULL similar to histone cluster 1, H2bn EMBV3_41349 GGAGTGACGTAGATGGCACTGTGGGATGTGGAATGATGAAGGTGCAGAGTGTCTCCTGGT Gene BVV0102_382804 - 1 EMBV3_10369 GK000028.2:30766928-30807518 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02461 GAGATTTATGCCGGGAAAAAAAACAACTGGGATGTGAATGAAGACCCAGGAGAAGATGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20292 CTCACGATGTTCTGATTGATGCCACCTTGGGTGCTCACAGGACTTTATGGTTGAAAGGGG Gene BVT0102_082891 + 1 EMBV3_21928 GK000030.2:84573312-84590184 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252305 1 XLOC_155246 Coding TCONS_00252305 XLOC_155246 Coding Coding - X:84585985-84587186 - TSS189526 1201 1 TCONS_00252305_2 207 0.572023313905079 1 0 2.83215223724114e-05 0 0 0 0 0 0 0 0 2.05553381602959e-05 0.000226821904582732 2.97725695384762e-06 0 1.17502090272125e-05 0 0.000879655151027299 0.000124413492281599 9.05307169340318e-05 0 0 0 0.00103339477329576 8.40253605514423e-05 0.00093524519664857 0 0 0 0.000287915815428254 5.05266854503331e-05 0.000635766502229123 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1031 93.31 0.572023313905079 TCONS_00252305_2 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-11 62.0 25.38 0.922705314009662 1 coding 0 0 0 0 -0.0447444288129588 0.717882841065059 -0.012243434430511 0.793490271806737 GAAAAGTTTATTAGCATTCCTTGTGAAAAATTTAAAAGTGATATTAGCAGTTAGTCTTCATACAAATTACATATAAAAATCAAGATGTCAGTGTATACTTAAGACTATTAAATCAGAGCAAAACAAAACCATTCACTCAGACTTGTGGATCACACCTCCATTTATTAGAGAACACAAGTTTGCCCAAACCAAACCCAGGCTTACATTTGTGAATTTGACAGGCAAAAGAGGAGCAGGAGGCACTATTAAATTAAAAGCTAATTTAAAAGATTTCAGTAGCTAAATAGAAAGTTCCCAGAGACCCAGATGACAGCCATGTGTCTAGCCCCTTTCAACCATAAAGTCCTGTGAGCACCCAAGGTGGCATCAATCAGAACATCGTGAGACTGGAATACACTTCCATTTGACTGTCTTTGGAAAAACCCAGTAACTTTACACAAGGGCAGTGGGCCCAGTGCCCAGAAGCCAGTTGACTTCCACAGTGGCCACATTACGATAATAGCCCCACTTTCCAAAGTGCAATGCCAAAGAATGCTCAAACTACCGCACAACTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCGTGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCGCTGGATCATCGAAAAAGAAAGAGAGTTCCAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGACTGTATGGATCACAATAAACTGTGGGAAATTCTGAAAGAGATGGGAATATCAGACCACCTGACCTGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATGTAACTTGTATGCAGAGTACCTCATGAGAAACGCTGGACTGGAAGAAGCACAAGGTGGAATCAAGACTGCCTGGAGAAATATAAATAACCTCATTTATGAAGATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTAAAAAGGCTGTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCTGGTCCCATCACTTCATGGGAAATA TCONS_00247415 . 3' 2999 TCONS_00247415 . 3' 4199 EMBV3_23392 GGCAGCTGGCCATGAGTTGGTGGACTTGGATAAGGAAGCAGAGGACAGTCAGAGTGGCTT Gene GeneID:100298265|CPAMD8:XM_002688549:173_cdna Constitutive 0 NULL GeneID:100298265 7 GENE CPAMD8 NULL C3 and PZP-like, alpha-2-macroglobulin domain containing 8 EMBV3_36704 TCTCGGGTGAGCTCAGGAGAAGCCTCTCAGACCAGTCCTGCGTGCCGCTGTGTCATGGAG Variant GeneID:100295639|LOC100295639:XM_002698830:72_cdna 65^146 1 EMBV3_42541 GeneID:100295639 28 GENE LOC100295639 NULL similar to corticosteroid-induced protein EMBV3_35834 GAGCCTCTGAGTGCATACGAATTCTCTTTGGCCTTGATCTGAAGGAAGTGGATCCCACCA Gene GeneID:532367|LOC532367:XM_002700186:66_cdna Constitutive 0 NULL GeneID:532367 X GENE LOC532367 NULL similar to melanoma antigen family B, 16 EMBV3_35167 CTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAG Gene BVV0101_061420 + 0 NULL GK000006.2:9457420-10223719 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218428 TCONS_00175509 TCONS_00166913 TCONS_00198907 TCONS_00061482 TCONS_00165977 TCONS_00071091 TCONS_00040258 TCONS_00250203 TCONS_00176420 TCONS_00031886 TCONS_00233473 TCONS_00246739 TCONS_00174808 TCONS_00211020 TCONS_00196823 TCONS_00238380 TCONS_00118491 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00250681 TCONS_00061491 TCONS_00174805 TCONS_00023655 TCONS_00171428 TCONS_00061483 TCONS_00174806 TCONS_00188145 TCONS_00161822 TCONS_00232824 TCONS_00118487 TCONS_00207485 TCONS_00031759 TCONS_00000529 TCONS_00198820 TCONS_00170891 TCONS_00246740 TCONS_00251625 TCONS_00220566 TCONS_00118459 TCONS_00061487 TCONS_00118040 TCONS_00061484 TCONS_00210913 TCONS_00061481 TCONS_00252081 TCONS_00061490 TCONS_00123823 TCONS_00061485 TCONS_00174809 TCONS_00140862 TCONS_00022895 TCONS_00107436 TCONS_00170890 TCONS_00205125 TCONS_00231489 TCONS_00010280 TCONS_00061489 TCONS_00125692 TCONS_00061488 TCONS_00006385 TCONS_00061486 47 XLOC_131748 XLOC_105290 XLOC_101749 XLOC_120560 XLOC_036985 XLOC_100817 XLOC_042864 XLOC_024074 XLOC_153146 XLOC_106198 XLOC_018131 XLOC_142955 XLOC_151107 XLOC_104695 XLOC_129530 XLOC_118488 XLOC_145047 XLOC_072644 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_153624 XLOC_014322 XLOC_103815 XLOC_114188 XLOC_098707 XLOC_142307 XLOC_126001 XLOC_018004 XLOC_000141 XLOC_120473 XLOC_103679 XLOC_154566 XLOC_133883 XLOC_072622 XLOC_072206 XLOC_129423 XLOC_155022 XLOC_075375 XLOC_085291 XLOC_013565 XLOC_063346 XLOC_124587 XLOC_140978 XLOC_005831 XLOC_077234 XLOC_001948 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_33747 AAAGGCAGTGGATTTGATTCATCTTGGAGTGCTGATGTGAGGAGGCCGCTGAGCATTACC Gene GeneID:519526|RNF160:XM_002684603:59_cdna Constitutive 0 NULL GeneID:519526 1 GENE RNF160 ZNF294 ring finger protein 160 EMBV3_25147 GCTACTTCTCTCCAAGGATCCCTATGCCACAATGCAGTAAGTAGGCACCTGGCCACAAGA Gene GeneID:525062|TRIM29:NM_001099379:137_cdna Constitutive 0 NULL GeneID:525062 15 GENE TRIM29 NULL tripartite motif-containing 29 EMBV3_10367 ATCTGCCCCTAACGTCCTGTAATACTTCACCTCCAGGAATTGTCCTTGGTGTCAGATGGC Gene GeneID:523707|NCOA3:XM_002692493:596_cdna Constitutive 0 NULL GeneID:523707 13 GENE NCOA3 NULL nuclear receptor coactivator 3 EMBV3_07836 CCTTTCAACACTGTCTCATTTTGATGCAATGGCAATTCCAGGTGTCCCAGAGAGTAATCC Gene BVV0102_175215 - 1 EMBV3_40221 GK000002.2:88908837-88915907 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102829 1 XLOC_061958 Coding TCONS_00102829 XLOC_061958 Coding Coding C2H2orf69 2:88897060-88912387 = TSS76486 4869 1 TCONS_00102829_1 390 0.0139659067570343 2 0.682435077645831 0.000224100234442543 0.000550074597015142 0.000189227728912191 8.34933276042606e-05 0.000225222960858413 8.98774873738945e-05 0.000108895136721881 7.81113316687313e-05 0.000336075020186968 0.000206188232641344 4.3062265695688e-05 4.11252908615909e-05 1.6012168527542e-05 4.97278628074771e-05 8.98168755651205e-05 0.0017173478651782 0.00111957013091063 0.001803615721359 0.000180940584968373 0.000156974172380404 0.000145925132437213 0.00072545458741127 0.000494602865702459 0.00154252645926667 0.00022338765597149 0.000169678072869809 0.000210778913294275 0.000156059238283521 0.000189761230918963 0.000184861674379329 XM_002685499.2 C2H2orf69 PREDICTED: Bos taurus chromosome 2 open reading frame, human C2orf69 (C2H2orf69), mRNA. 0.0 6237 100.00 0.710002053809817 NM_153689.5 C2orf69 Homo sapiens chromosome 2 open reading frame 69 (C2orf69), mRNA. 0.0 2122 84.12 0.394536865886219 TCONS_00102829_1 sp|Q8N8R5|CB069_HUMAN CB069_HUMAN UPF0565 protein C2orf69; 0.0 672 88.46 0.997435897435897 1 coding 0 0 0 0 -0.0658288700704657 0.663376739692111 -0.00901846465273361 0.906786714209647 AGCGCGCGGACGTCGGCTTCTGACGCAGTCGTTGCCCCTGGGCCGGCTGCCGCCCAGGCCGCTCCCGCCGACCGTTGGCGCCAGGCTGAAGTTCCTCCCTCAGGCCCACCCTCCACCCTCCGAACCGCTACGGCGGCGGCGACCCATGTGGGGGTTCAGGCTCCTGCGGTCGCCGCCGCTGCTTCTTCTGCTGCCGCAGCTCGGAATCGGAATCGCCGCGTCCAGCTCTCACGCCGGAACCATGAACCTGGGCAGCAACAGCAGCGGCGGCGCGCCCTGCTCCCCCTCGGCCGAGCGGCGCCGGCAGCAGTGCGTGCAGCTGTCCACGGTGCCGGGAGCCGACCCTCAGCGCAGCAACGAATTGCTTCTGCTGGCGGCGGCGACGGCCGGGGAGGGACCAGGACGGCGGGACCTCTCTGAGGACCCGGCGAAGGAGGAGGTGCAACCGCCGCCCCAGCATCACGTTCTCTACTTCCCCGGGGATGTGCAGAATTACCATGAAATTATGACTCGTCATCCTGAGAATTATCAGTGGGAAAACTGGAGTCTAGAAAATGTTGCCACCATCTTAGCCCATCGGTTCCCCAATAGTTATATTTGGGTGATAAAGTGTTCCCGAATGCATTTGCACAAATTCAGCTGCTATGACAATTTTGTGAAAAGCAATATGTTTGGTGCTCCAGAACACAGTACTGACTTTGGAGCTTTTAAGCACCTTTACATGTTATTAGTTAATGCTTTTAACTTAAGTCAGAAGAGTTTGCTATCAAAGAAGAATGTGAAAGATTCGAATAAGGACTCCAAAGCATCTAATTGTCGATCCACTTCTTCTCATACTACCAATGGTTGCCAGGGAGAAAAAGAGAGGACCTGTGAAAAATCTGATGAGTCTGCTGTGAGTTTTTTTCCACCATCATTAAATGGTGCTTCTTTTACTTTGATTGGATTCAGTAAAGGTTGTGTTGTTTTGAATCAGTTGCTTTTTGAATTGAAAGAAGCCAAGAAAGACAAGAACATCGATGCTTTTATCAAAAACATAAAAACAATGTACTGGTTGGATGGTGGTCATTCTGGAGGAAGCAACACTTGGATTACTTATCCGGAAGTCTTGAAAGAATTTGCACAAACAGGGATAATTGTTCACACCCATGTAACACCTTACCAAGTACATGATCCAATGAGATCTTGGATTGGAAAGGAGCACAAGAAATTTGTTCAGATACTTGGAGATTTTGGTATGCAGGTGACTAGCCAAATTCATTTTGCAAACGATGCTCCTTCCATAGAGAATCACTTCAGGGTTCATGAAGTATTTTAGACTATAATATTATTAATGTAGAAGAGCAGAAGCACTTTCAGAAAGTGTTATGAATTCAGATAATGAGGATGTAAATTCATAGATGCAGTGTCAATTTTTTTTCCTGGGCATGGGGGAAGGAAGCACACATTCCTAAAATATGGGTGTAATGTGCAATAATGTTCCTTGTTTGTAAATGTATTTAATTGGGACTGGGTTGGAATTACTTCATTTGAAATTTAAAAGGTGATTTGTGATAATCCTACAAGGAGATATAAGACGCTTAAAAATGAAAAGTTACAATACAGTCCTTATAAAAGGCAGTGAAGATTGTTATTGTTGGAAATAGTTTATTTTCTGAGTAATGTTTGAAACTAATTTTGGTGATACTTTAACAGTAAATAGCTCTTTCGGACTCAAAACTTTTGAGTGGAAATACTCTCTCTTCAAACAAAATGAAGGCACACTGATGTTTTCCATCATTTTGCAATAACTATACCCTCTTATGTTTATAAACTCATGAAGTTATTCTTCAATGTGCCATCAATTGTTTTTTCTTAAGAGTCAAAATGTATTTGTTTCCACATATCCAAGAATGTGCAGTAGTAAAGAGTTGGTTTTAAAAATATTACACTTAAGCACTGTGGCTTACTTTTTAATTGACAGCTTTTGGATAAGACATTTTGGAGTTTCTTAAAATTTGGCAACAGTTCTTTTAGAAAATTGTTTCAGATTGAACATAATTGTGTATATTGGGTAAAAATACAGATTTAAAATCATTTCATCCTATCAGTCTTTTGAAAGAGATCAGCTTAGGTAAAATGTAATCCTCTACTTTGGTACAGCTCTATTAAAAAGGAGACAGATTCTATAGATTGAAGTCACTGTTTCTCCTGCAGCATGATTTTGTCTGCCAAAAGAAAGCAGTTCTCCTTGGCCAAATGCAAAATTATATTGCTAAAAGAAAAGTTAAAAGGGAAAGTTTGAAGATACAAATGATTTTATTTTGGCTGAAAACTAAATTTGCTTAACACTGCTACATAAATTGGGTGAGGTTTCCTTCTGCCCATTTTTCTTTACCTAGATAAATATATTTTGAGAAACCAGGATCTAATAAATGTCAACCAACATTGAAACATAGCTGTGTGATTACAATAAAAAGTTAATGGTCTTTTAAAAATTGTTTATTAATAATTAGCTTTTATGGGTCGTGAAATAATTAAGCAGGGAAGTAACATGCTGTTTTCAGATTGAAAAAACAGACTGAAGCTTAATATCTTAATAAGCCAGAGGGTCTCAATATATAAAACAATAATTAAAATGTTAATTTCTTGGTTTCTTCCCAGAATTATATTTTAATAACTTGGTAAGTACATTCCAAATATTCAGACTTATAAGAAAGGATTTTTACTTAACAGATACTTAAAATTAATATCCCCTAATTCTATGAATTGCAGAATAGTATCTTTCAATGGTTTTCTAAACGGATAAAGTACAATAGTTTTATGTTGCTTTGGTTTCTTTTAAATACCTGCTGTTTCTTTTGAGACCAAAAATTCCCAGCAAGGAAACAAGTCAGTCTGATTCTAGCATTTTATTTATTACCTTGTCTTAAAACACCATTATTGATTGGATAGCTCCTTTCAATATGTTTTAATAATCCTTGGTTAAATTTATGTATATCTAATGTAAATAGCTAAGTTACTAAGTATTTTAATGCAGGAGGAAGGAAAGGCATTTCTTTTTACGAATTAACTAAAATGGAAAAGTATGACTTTCAGCAGAAGGAAGGATTCATTTAAAAATCTGAGGTATTTAAAGATCTGGTCCTTGTAGCTATCTCATCTTAACTATAATTGTTATATGTTGAATGGATATTAAGAATTACTCTCTGGGACACCTGGAATTGCCATTGCATCAAAATGAGACAGTGTTGAAAGGTAGAATTATTTTCTTGAATGAAAATATATTCAAGTTGATCTATACTCAAATATTTTAATACTTAAAAATTTGTTCTTTTTCCACATTTGTTTAAAACTGTTACAAATGTTAGTGTTTCCTTTTGGATTGTGCTTTTGTGTTTGTGTCATGAGTCAATTGAGAAAAGTAGTCAAATAATGTTAAAGTTGTTACCACCACAGCATGAATGTACAATTGTATTAAATTTAATCCACAGAAGTGTATTTGGATGTGTGCTGTATGTTAACTAGATTTGTTTATAACTTTAGATTGTTACTTAGAAAGCAGCTATTTCTCTCCACTTTGCCAGTTTGGATTTGTTAATGTTTTCATTAATGTCCCTAAGTTTTCGTACAAGCAACTTTGAAACCTTTCCTATATAAATACATCTTTCCTTTAAATTGCTCTACAAAAATTAGCATTATTTCCTTCTGTTGGATTTCCTAGAGAACAAAATCTCTCAAAAATAAGTACTTCCTTTTTTGAGCTAATCACCCAAGGTCTGTATTTCTTTAGCTGTCATCAAGGGACCTGGTTAAAATAAGGTGTGATCTGTTTTTCATTTCATTCGTGCAATATCTAAGCCCCATCGAGGGTAAAGAAGGTTTAGGCACAGGATACAGTGTAGACAAAACAGTCCCAGCATGTGAGTATGGAAATGTATAACATATTAAGATTGAAGAGTAATGTATGAAACAAAAGATACTATTCTTAAAAGAGCTATTATTCTGTTACACATCATTTAAGGGCTTTTAAGAGAAACCTGCTTTAGAGGATAAGACCTCTGTGAATCCAGGTTGCTCTTTATAAAAGCATAGAGGCCAAGGATCTCTTAGTGGTAGAGACAGCCAGAGTCACTTAGGATGCCATTTTAGTATTCCATTTAATGGAACTTGAAAAAATAGAATATAACTTCGGTGTATTTAAGACACCCAAGTAACCGTGGCCTGTATGTGTCAAAAAAGACTTAGGTAACCCCGGCAGAGACATGTATGAGTGCCAATCTGTGTTACTTCCTCCTGACTATCTGTTTTTCAGCACGGGGCAGGAGTCAGAACAGCACAGTTCCAACTCCATCTAGACGTGAATCCCTGCTTTCTGCATTTTGGGGGGTGGTCAGCTTATAAAAGATTCAACCTTGATGTCTCTTGGTAAATTTAGATCGGTGAGGAAAGCCTCATTACTAAGGTTCTTTTCAAATGTTCACATAGCTGCGGTTCAGAAGGAAGGAAAGATAGGGAAAAAGCCGTGTTGACCTATAGTTTCCCTTGTTCTGATATTTCATCAGTGACAAGTTTGAAGTTACTGAATAATTAGAATTCAGATGTAATTATGTGCCAAGACAAATACTATTGTTTGTGAAAAGATGATAATTACAATCTTCACCGGGGGCATTTTTAAATTTTATTTTGAAATAGTAATATACACCAGGGCAACAACAAAAAAATCAGATAATAGGTAACTGCAAATTTCAGTCTGCCCATCTGCTTGTATAACCTCAGAGGTGAGCACTAGTTTCCTATGTATCCTTGCACACTTGGGGCCTCCCAGGTGGCTCAGCGGTAAAGAACCTGTCTGCTAGTGCAAGAGACACAGGTTCCACCCCCGCCCCC EMBV3_39844 GAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTCGGCCCTCAGGTGGCTGAAGGAGAAAA Gene GeneID:282050|RPS14:NM_001077830:22_cdna Constitutive 0 NULL GeneID:282050 7 GENE RPS14 NULL ribosomal protein S14 EMBV3_11512 TCAGTGGTGGTGTTTGAGTGCCTCCAGGGTTTTTACCTGAATGGCAGCAACCTAGTGTTC Gene GeneID:616002|CD46:XM_002694227:147_cdna Constitutive 1 NULL GeneID:616002 16 GENE CD46 NULL CD46 molecule, complement regulatory protein EMBV3_03375 CTCCTTCAGAAGTGGAATTAGGGAGCTGGAGTGCTTTTTCAGATGGACTAAATTTATGTC Gene GeneID:510330|DYNC1LI1:NM_001046052:80_cdna Constitutive 3 NULL GeneID:510330 22 GENE DYNC1LI1 MGC137616 dynein, cytoplasmic 1, light intermediate chain 1 EMBV3_03612 CTGGGCACATTGTATGGCAACGTGTTTTCGCAGACCACCATCTGCAGGTTCGAGGCCTTA Gene GeneID:539732|POU3F4:XM_002699940:102_cdna Constitutive 0 NULL GeneID:539732 X GENE POU3F4 NULL POU class 3 homeobox 4 EMBV3_03007 CTTTGCCACCTAATTCTCCAGTATGCTCTTCTCGGCCCAAAATCCACCTTCTCTGCTACC Gene BVT0101_002252 - 0 NULL GK000024.2:35047785-35054339 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138855 TCONS_00138850 1 XLOC_084751 Coding TCONS_00138855 XLOC_084751 Coding Coding ESCO1 24:35004992-35063315 j TSS103972 5661 1 TCONS_00138855_4 828 0.0710121886592475 16 0.903209766468914 7.88238451069452e-45 5.25540137876898e-48 1.29816751644282e-59 1.45148811619191e-11 1.19592400537195e-50 2.05362358073933e-21 1.22736321799371e-30 1.96548392742169e-57 1.20369857564091e-06 0.000194211447609582 0.00039411174319878 7.84489589562589e-08 6.80486080302036e-05 7.64966119667857e-09 4.59015019403011e-05 2.16570219782628e-29 1.57335913733149e-25 7.66169695457968e-05 2.31852014282922e-84 4.74668700671282e-05 4.00009872312034e-33 2.53087853953701e-23 6.71328851494142e-22 9.30311079612183e-05 4.34872892249111e-33 1.61020569061017e-25 1.41153157602232e-65 0.000249667550536781 4.427206193777e-18 0.000101200689853959 XM_005192992.1 ESCO1 PREDICTED: Bos taurus establishment of sister chromatid cohesion N-acetyltransferase 1 (ESCO1), transcript variant X2, mRNA. 0.0 6370 100.00 0.623741388447271 NM_052911.2 ESCO1 Homo sapiens establishment of sister chromatid cohesion N-acetyltransferase 1 (ESCO1), mRNA. 0.0 3690 84.81 0.574633456986398 TCONS_00138855_4 sp|Q5FWF5|ESCO1_HUMAN ESCO1_HUMAN N-acetyltransferase ESCO1; 0.0 1378 83.65 0.996376811594203 2 coding 0 0 0 0 -0.0371234017776249 0.842025171461166 -0.0371234017776249 0.842025171461166 ACTCCCATCTGACGGGCTAGGCGTCGCCGTCGTCGCCGGAAGTTTGGCGTTTCTGTGCCGCGGGAGAGGAGGCGGCGGCGGCAGCGGCAGCGGCAGAAGCAGCTGAGTGTCTCCCGATACCCGGATGTGAGGCGGTCTGCTGGCTCGCGTCGGACCCTCGGCCGGGAGCGAGGAAGTTTGAATTGATCTTTTACTGGTATATGATTTTAATCTCGTGAGCCTTTGAAAGGGTCTCTGGAATCTGCAGGATCCCTGTCCCACACTTTGAGAACTACTGCTTTAAGATTAACAGCCAAACACATGGAAGCTGTTAGAAGTATCATTCATTAGAAGCATCATCTATCAACTTGAAGAAAAAAATTATATGTAATTTTCATTTCAATAAGGTGCTGTATAATGTGTTAAAAGGAAATTATAAGGAATGATTTTGTCAAATTCTATGAGTTATGGTGGCTGAAAGATCAAATGTTTCTTGTGGGAAAGGAAATAAATGCCAGCACAAAAGGAAATCTTTATTAATAGAGTATTTTATTAAACGGACGTGGTTAAATAAGAACTTTAAATCAACAGACTCAGCAAACAAGCAAAGAAACGTGTTAGCTATAAGACATGTTTCTAATGAATCAAAGTCCAATAACTGTAGACTTCAGAAGAAAAAAATTTTCAAAAACTTTGTCAAATCAGACGGGTCAGTGATAAATAACTTATCCAGTCATAGGGCTAGGCCTGAAAACAAATTTAATTGAAACATTAACAAAACAGATCAAACTTGAATTAAAATTTTTGTCATAAAAAGTTCTGAAAATATTAGCTTAGATTTTAATTTTTCTCAAATATCTATTGCCTTGTCCAAAGTAAAGCAAATATTATTCAGCCTTCATGCCGTAAGGATGACAGAAATCTTAGAAGACTAGTACTTTTGTTGAAAATGTGTACCAGTATCAGTTGAATTTTTTAGACCTGCTCAGAGATAATACTAGACATTCAGCATTTATTATTTACTAGGACACAAAAATTTCGAAAATACTCAGAAAAGGAGGACCTTACTCAGAAATGATGTCCATTCAGGAGAAATCAAAAGAAAATTCCTCTAGTGTTATTAAAAAGAATGAAGATAAGAATTTAGAAACACAAGTTCAAGGTTCTCAAAAAAATCTAGCAAAAAAATCAGATCCAAAGGAAGCTATAAAATCACTGGTTAAATCTTCAAATGAAAGTAAAGTGAATCAGCCTGAATTAGGAACATGCATGAGCACAAGGTCAGCATCCACTGATAAAAGAGCTAGTAAATCTACTAATAAAAATATGGTGACTGTAAAGGGACATTCACAACAGGAATCTACAAAACAGAAGAAAATATCTCAGAAAAAAACAGTGCACGAAACCCCTAAATCAAGTGAACAGCTCAACCGGAGATCACAAAGACTACAACAGCTAACAGAGGTTTCAACAAGGTCTCTGCGTAGTAGAGAAATTCAGGGTCAGGCTCAAGCAGTTAAACAGAGTTTGCCGCCAACAAAAAAAGAGCACTGTAACAATACTCAGAGTAAATCTAATAAAGCTAAAACAAATCAGAAACATGTGAAAAGAAAAGTATTGGAAATAAAGTCTGATTCTAAAGAGGAAGAAAATTCTGTCACTAATGAAGCGATCAATTCCCCCAAAGGAAAAAAGCGCAAAGTGGAGCATCAGACGGCTTATACTTCTGGTTCTCAGTGCATAAAAGGATCTGAAAAGTGTCTGGAGAATACTAGAAAAGAAGAAACAAAATCTTCTTCTGAGATAAAAAGATCCAAAGTGGCTACTTCAGTGGTCTCTAAAAAGAACGAGATGAAGAAGTCAGTTCACACACAAGTGAATAATAGTGCAAAATCCCAAAAAAGTCCACAGCCATCAGTGCCTGAACAAACTGGAGACAATGGGCTGGAGCAAGCAGGAACAAGCAAACGCGGGAGCATTCTCCAGCTCTGTGAAGAAATTGCTGGTGAAATTGAGTCAGATACTGTAGAGGTAAAAAAGGAATCTTCACAAATGGAAAGTGTAAAGGAGGAGAAGCCTACAGAAATAAAATTGGAAGAGACAGAGACTGAAAGACAAATACTTCATCAGAAGGAAGCGAATCAGGACGTTCAGTGTAATCGTTTCTTCCCCAGTAGAAAAACAAAGCCTGTGAAATGTATACTAAATGGAATAAACAACTCAACTAAAAAGAACTCCAACTGGACTAAAATTAAACTCTCAAAATTTAACTCTGTGCAGCAAAATAAATTAGACTCTCAATTTTCCCCTAAATCGGGCTTATTACGAACCAGTTTTTCACTACCTGCGTTAGAAACGCATCAGCAAGTGACGCAAAGTACATTTTTAGGGTCAAAACCATATGGTGATAAAAATAAAGCTTGCCAGCAGGAAGAAATGAAAGAAGTTAATTCTGAAGATGTTACACCTAATGATATTACAGTTGAAATGAATAAAATCCCCAAAAAGGCTCCTGAAAATTGTCATTTGGGTAATCAGATAAAACCACCTCCTGACCAACCATTGGATAAGCAGAAGAAAGATGCTTTTGAATCAACACCGGATAAGAATTGCAGCCTGTGTTTGGAATCTAAGCTTGAAAACAATCCAGTGGAAAATGCCACTACTGTCTCAACTCTGCTCAGTCAAGCAAAAATCGATACAGGAGAGAATAAATTTCCAGGTTCGATTCCCAAACAGCACAGTGTACTCTGTAATCAGACATCTAAGACGAGTGATAACAGGGAGATACCACCAAATCATTCTTGGCCCAAGTGTAATTCCCATTTGGAGATAACAATTCCAAAAGACTTGAAACTAAAAGAAGCAGAGAAAGCTGATGAAAAACAGTTGATCATAGATGCAGGACAAAAAAGATTTGGAGCAGTTTCCTGTAATGTTTGTGGCATGCTTTACACTGCTTCAAATCCAGAGGATGAAACACAGCATCTGCTCTTCCACAATCAGTTTATAAGTGCTGTAAAATACGTGGGTTGGAAAAAAGAAAGAATTCTAGCTGAATATCCTGATGGCAGGATAATAATGGTTCTTCCTGAAGATCCAAAGTATGCCCTGAAAAAGGTTGACGAGATTAGAGAGATGGTTGATAATGATTTAGGTTTCCAGCAGGCTCCACTCATGTGCTATTCCAGAACAAAAACACTTCTGTTTATTTCTAATGACAAAAAGGTAGTTGGTTGTCTAATTGCAGAACATATCCAGTGGGGCTACAGAGTTATAGAAGAAAAACTTCCAGTTATCAGGTCAGAAGAAGAAAAGGTCAGATTTGAAAGGCAAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCTGCAATCTGTGGCATCAGCCGCATATGGGTGTTCAGCATGATGCGTCGGAAGAAGATCGCTTCTCGCATGATTGAATGCCTAAGGAGTAACTTTATATATGGCTCATACTTGAGTAAAGAGGAAATTGCTTTCTCAGACCCTACTCCTGATGGGAAACTGTTTGCAACCCAGTACTGTGGCACTGAGAAATAAAGAGCCATGGCCCAAGAATGAAACACCACTATGATTTAATATAGGTGAATGTTATGAGCTGACATTAAAACCAGCTAAGAATTAAGACTTTTAAATTAAGATCAACATATTGTGATATGTGATATATATCATTGTGATATATACACACACACACATTGTCACCCATAGATGTGTGCTTTTAAAATTAATTGAGTGGTGTAAGGCTCTGTACCTGTCAGTAGGGTGGAATGGTAAGGCAGTGTGACTGTTTCTTCTCATTCATCATGATGGTCCAACTCTTGACACTGCTTTTCTCTTTGGTCTTGAGACTCTTCTAGTCATCGCTGGTCTCAGTGTTTGCCTGACAGGGAACCCATGATTTTTTTTAAATAGGATGAAAACTTCAGGTGTAGCATAGATGTTCTAGTAACTGTTAAACTCATAACATAGGCCCAGATCCCATATAAGCAATAGGATGCTTTGGGGAGCCATACTCGGTGGGTTTCAAAGGGACTTGGAAGTAGGTTGTATTTATTGGTTGGTTTAAAGGTTACCATTACTAGGAAGATTGTTTCTTTTCATGTTTATATTAAAGACACAGCCCCTCAAATAAATTTTACATTCTAGCTATTTCTCCAAGAAGAGAATTATTAATAATATTTAACATTTGAGTGTTTGCCATGTGTCATACTTTGTGTTTGTGCTGTGCTTAAATCACTCAGTCGTGTCTGACTCTTTGCGACCCTGCGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCAGCCCAGGGATCGAACCCAAGTCTCCCACATTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCCAACAATACTGGAGTGAGTAGCCTGTCCCTTCTCCAGGGGATCTTCCTGACCCAGGGATCGAACTGGGGCCTCCTGCACTGCAGGCAGATCCTGTACCAGCTGAGCTACCAGGGAAGCCCTAGTGATGCATTATTTAATTATGACAGCCACATAGGTAGAGTTTACAGGTGAGGAATCTAGATTTAGACGAGTTTATAGGAGCAGTTGCAGTCTTTGTGAAAGATACGCAAATTGAACTAAAGCTATGATGTGTGGATGAAAATTAGACAAATGAACTCTGAAAAGTTAAAATTGAAGAATTGATGGAGTTGATAACTGACTAGAGAAAGATCATGACAGGAGAATCTGGGTAATTTTGGTTTAGGTAGCAGAGAAGGTGGATTTTGGGCCGAGAAGAGCATACTGGAGAATTAGGTGGCAAAGGATGAGCTTGGTTCTGCTCACAGTTTGAAGGTGGTTGCTGAATCTCCAAGTGGAGATATCTATTTGGTGTATATAACTGAACATGTAGACAGAGTTTGGGAAAAGTTTGAACTAAACCAATTTATTTAGTTATTTAAAGATTTAGAGGAGATCTCCACCCTGGGGTTTATAAAATTAGAGGGTAGAAGAGACTATTGAAGAACTTGTGAGAATGCACACGCAAGGGAAGAACCAGAAGAAAGTGGTAGAAACCAAGACTTGAGAGCCGTTGACGTTGTCACAGCACCGCTGAAGACTGAAGAGTGACGACAGAAACAGAATCATGGTCTCCGTGGAGTTGTGGAGTGGGAACTAGCAGCACTCACAAGCAAGATACTGAATTTGATTTACCTTTGAGAAACTTAAATTTCTTGAGAAGATCAGCACCTACAAAAGAGTCACAGAGGTACAGGAGGAGTCCCCCGAAGCACACCCCTTCACAGTTGGCGTTGCTGGAGTGGGGTCTGGAGCTGACGTAGCACACGGCCACCTGCAACCATCAAGCACAGAGCACGCCAGCGTTTCAAAAGCCAGTAAAACCTCCGCGTCGTCAGCTGATGATCCTTGCCTTCCTTTCTAGCTGTCCATCTCAGGGTCAGATGATTACAAAAATGGCAAAGCTGGCACTAAACAAATCCACTCAAATCTGGGATGAGGAAATATTTTCTCCTAAAGGTCAGTCAGGCATGGAAAGGTGTGAGGGTCATGTAAACATAGAGAAAGATTTTAGTTAAGTTTGGGGATATGTGTTTTGGGGAAGGATAAAGG EMBV3_10753 TTGGAGCTGCAACCCTGGAGTATGGACATCAAGGACTACGTTTTCCTGAGACCTGAGAGT Gene GeneID:505224|ATP6V0E2:NM_001097574:586_cdna Constitutive 0 NULL GeneID:505224 4 GENE ATP6V0E2 MGC137533 ATPase, H+ transporting V0 subunit e2 EMBV3_02726 GAAATTACAAGTGAAGACCACATTATCCAGGAATGGCAAGGAATTTACTCTGTCAGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25970 CATGCAGGTTCTGGGTCAGGCAGCGCAGGGGAACCAAGAGGAGGAGCACTTCGCGATCCT Gene GeneID:100296451|LOC100296451:XM_002692314:63_cdna Constitutive 0 NULL GeneID:100296451 13 GENE LOC100296451 NULL hypothetical protein LOC100296451 EMBV3_21169 CCAGAGGAGATACTCTTGGAATGTAAAGCCAAGTGCCGGTCAAGGAGGCCCGAACAAAAG Gene GeneID:508944|DUSP11:NM_001014875:1_cdna Constitutive 0 NULL GeneID:508944 11 GENE DUSP11 MGC129113 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) EMBV3_02018 TTTAATAACTGCAAAAGACAAATTGACTCTACAGACTTTAGCCAGACTGCAAACAATAAA Gene GeneID:524531|USP25:XM_002684646:32_cdna Constitutive 0 NULL GeneID:524531 1 GENE USP25 NULL ubiquitin specific peptidase 25 EMBV3_04789 GCCATAGTCTTGGGTGTGCATTTGTGTTCACCTCGTGTCTCCCACAGGCAACATCACACA Gene BVV0102_145671 + 0 NULL GK000011.2:2252493-2286336 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026604 TCONS_00026605 TCONS_00026606 1 XLOC_015076 Coding TCONS_00026604 XLOC_015076 Coding Coding STARD7 11:2284567-2294879 j TSS19056 3849 4 TCONS_00026604_2 100 0.206547155105222 4 0.627097274755116 1.93295944438476e-10 1.22857685988442e-10 1.23013191029951e-10 9.38949565718031e-11 6.56461715275984e-11 6.14196311150957e-11 2.93691010281224e-05 7.31278246418795e-11 9.56838694353923e-11 2.52273041954598e-09 2.70200229207763e-05 4.55408240802366e-05 2.85542337088095e-11 5.46947892681536e-10 6.43045594942905e-11 0.00168489097433466 0.00100931916233234 0.00198283661905618 0 1.12653729600415e-10 0 0.00227023842025572 0.000575688395932484 2.12311357743074e-07 4.06784498522196e-11 0 6.65553241002901e-11 0.00055104623237707 0.00029646819388134 0.000699331770500064 NM_001102086.2 STARD7 Bos taurus StAR-related lipid transfer (START) domain containing 7 (STARD7), mRNA. 0.0 3642 99.90 0.525591062613666 NM_020151.3 STARD7 Homo sapiens StAR-related lipid transfer (START) domain containing 7 (STARD7), mRNA. 1e-146 526 88.16 0.107300597557807 TCONS_00026604_2 sp|Q9NQZ5|STAR7_HUMAN STAR7_HUMAN StAR-related lipid transfer protein 7, mitochondrial; 1e-62 198 92.00 0.99 0 coding 0 0 0 0 -0.028895527981665 0.792602292224943 -0.0351861566251823 0.507678320845851 TACGCATGCTGAGCAGCTTGGCCTTCATTCACACGTGTCTGGTGGGAGTCTGCTTGTCTTTGCTGTGGAGCACCCGAGTGTGCCAGAGTCTCCGGAATTCGTCAGGGTCCGATCATATGAGTCCCAAATGGTTATCCGTCCACACAAGTCATTTGATGAGAACGGCTTTGACTACTTGCTGACATATAGTGACAACCCCCAGACCGTGTTTCCTCGCTACTGCGTTAGTTGGATGGTTTCCAGTGGCATGCCAGATTTCCTGGAGAAGCTGCACACGGCCACTCTGAAAGCCAAGAACATGGAGATCAAAGTGAAGGACTATATCTCATCTAAGCCTTTGGAAGTGGGGAGTGAGGCCAAAGCCGCCACCCCATCTTCTGAGCGCAAGAGCGAGGGCAGCTGTGGGCCTGCCCGCATCGAGTACGCTTGACAGGCCCTGGGGGAAGCGGGGCCAGGCGGGTTCCAGCCCTGTCTTGGCGTCGCCACGCCCTCTGCTGCGGAACACCACTGCAGGCTGATTCGGTACTGCTCTCAGAGCCCTGCTGCTCAGTGTTGGAACAGGAGGAGGAGGCAGTCGAAGACCCTGGGCACGTTCTCGGGCCAAGCGTTTTGAAACTGGTGTTTCCTGGAGCTCCTCTGGAGCCAGCCTCGCCTCAGGCCAGAGGGGACAGCATCCTTTGCTTTCTCTGCCCACATTCCGTTCTCAGCCTCGGTTCTGCAGCACTTTGGGTGGGTTTCCTTCGGTTCTGAAGGTCCAGCTGGACCATGTGGACGGTTGAGTCTCCAATGAGGGGTCATGGCCGGGGGCACTCTTGGTCACAGTCCTGGTGTTGAGGGGGTGTGAACTGTTGCTTGGCAGCGTAAGTGCCTTGTCCTCACCTTCCCGTCTCTAGGGACATAGTTTGTATCAAGAAATGTCAGTCTCCGCCTCCCGTTTCCTTTCCCCACGCAAAGCCGTTTCCCTGAGTCAGCCAGTTCTTCGGTATTCATGTGCTGTGTCCATCTGGGGCACTGCGTCCCTGTAGCCCATTTACCAAGAACCGGGAAACTAACGCTGTCAGACAGTAACTCTATCATCAGTGTTTTTGATAGCATCAGTGGAGATGCTCAAAACATTATCCAGTTTAGTTTTGTGTGTTGTGTTTTTTTTAACTTTTGTGTTAAAAATGGGGGGTGGAATTAGGGAATGGAATAGGATTTTTGTTCCATAGTCTGGACTGTATAGACAGCACCGTTTTGATTCAGGCATTATTATCACACTTTGGGTTTGATTTGATGCCCGCAAATTGGCCATCTTGGAAGGCTGAAGGCAGAGGGGTAGGGGTCGGGCACCTCCCTGGAAGCTCTCAGAGCTGCAGACAAGCTTTGTGAGCAGGCAGGTGCAGTCGGTCCCAAATGCTCATATAAGGGGGAGGTGACTCATGTGACCCTGTGAAAAACTTCGTCGTCTTCTGAGCTAAAATTAAGGCAAACCACACTGTTTGGATAAAGTCACAATCAGATGGGATCAGCCTGGCCTGGCTAATGGAGCTTATGGTCATGCTGCACTCTGACTGGGAGCATCGGGACAGGCTTCAGGGCTTCAGATCCTCCTTCTCCCCCTTATTTCTTAGAATATGAATGACGAGATTTTCCCCACCCCCACTTGCTACCCTTTTGTGTTGCTGAAAGAGGAGCAAAAGCTGAGATTAAGCCCCTTAACCTTTTTATGGCCTAAGTTTTGTGCCAAAGAAATGCCTGCCCCACTCTTTGACGTCTTGCAGTCTCTGCGTCGTTGGCAGACCAGAGGGGTGCCTCAGACAGTCCCGCTTCTCTTCATCGGTTGTGTCTCCCTCCTCTTCCCCAGGGATGAGTCCCTGGGTTGCATTGGAGCTGAGCGCCTGTGACTGTTGGGACGGGTGGTGTGGGCGAGTGCCGTGAGGACACTCGAGCAGAGGAGCTGTGCGTTGCTCGTGTGCTTTTTGGCAGTTTGACTCTGCACTTGGTGTTGGTCTGTATAGTTACTTACGTCATTGTAATGATTTCACTCCTGACCGTGACGTTTTTACCAAATGCGTGAATAAATACATAAGGATTGGTATGAAGGAATGTGTCTTTGGACGTATGTTGTCAAGGAAGTCTTGCATACTGGGATTATTACTTCTTCCTGATCAAAAAGCATATTCCCGCCAGCAGAGTTGGCACATGAAAGCAGCGAGGTTTGGTCTTCCCTGGCGGTGACTGAAACACCACCCACCACCTTGCCTACAGACTATAAGGCCTTTCCAGGGAACCAGATTGGCGATTGAAAACAAACCACCATTTCCACTTCCTTGTCTGGATGCACTGGTAACCCACACCCTTTGCTTTAAAAGGATGGACTTGGTGGGAGCAGCATTAGAAGAGCGGCAGGGCCTCTGGCCTGGGTCTGGAGCTGGAGAGTGGGGTGAGCCCCAAAACCCAGGGTGTGGCGGGAAGTGAGGTCACACAGGCAGTTCTGCTGGGGTGCAGGTTGGTGCCGGGTGAAAGATCCATTGAAGACTCCAAGCTCACGATGAGTTCTGAGTGTATGTGTGATGTTGCCTGTGGGAGACACGAGGTGAACACAAATGCACACCCAAGACTATGGCGGCTCCTCCACATTGCTGTGAAGTCCTCTCAGCTGGCAGACCTCCTGTTAGAGGTCGTGGACTGTGGGTACACGTGGGTCTGCGTAACCCCTCACTGGGGAGCTGGGTGCTGGCCTTCGCCCTGCTTGGCACCTTGGCCACTGTCCAGGCTACGCGTGAACACTTGCATGGAGAAGCGGTTGGGTTCCTAACAGAGCAGCGTTTGTGCTGCCAGACAGCTCCAGCTTTCAGGAAGTTCTTTACATTGACGCCAGGTGGGCCTCATCCTGTCTACTGAAGGGTCAAAGCCCTGAGCTTGACGCAACACTGGAAAACTCTCCCGTGGAAGAACCCTTCATTTTCTTGAAGGCGGTGCTCGTGTGAGAGCTTTTCCCAGGCTTTATGTCACCAGCAACTTTTAAAAATCCTCCAACTTTTTGAGTACTTCTCTGGCGGTCCAATGGTCAAGACTCTGCCTTCCAATGCAGGGCGTGTGGATTTGATGCCTGGTGGGGAGCTAAGATCCCCCATGCCTTGTAACCAAAAAACGTGAAACAGAGGCAGAAGCAGTTTTGTAACAATTCAATAGAGACTTTGAAAATGGTCCACATCAAAAAAATGTTTTAAAAAATTCAACTTTTTATTTTGAACAATTCTATACATATAGAAAAGTTGAAAGAGTACTAATAAAACCTGGTATACCCTTCCCCTGCCTTTGCTGGCTGTTAACCTGTTGTCGTGTGTGCTTTATCTTCGCTGTATACACTGCTATGACTGGACTGTGTCCTCAAATGTGTATGCATGCTGGGGCCCTAACCCTCAACGTGATGGAGATAGGTCTTTGGGAAGTGATTAGATGAGGTCTTGAGGGTGGGCCCCATGATGGGATTAGTGCCCTTTATACTAATTGCTGCGGAAGTTGATCTCCCTCTCCACCACAGGAGGAACATGAAAAGCCAGAGCACTCTAACCAGGGACAGAATAGACCAGCATCTGAACCTCGGTTGTTGAGCCTCCAGAATTGTGAGAAATCTGTTGTTTAAGTCACTCTTGTCTGTGGCATTTCATTACAGTGCCCCGATTAGACTAATATACTTTTTCATGACCATCTGAAAGTAAATTGCAAACATATTTCATTAAATACTTGACCATGGTTTTTTCTTGGCCTTGCTGTGCAGCATGCCGTGTCTTAGTTCCTGACCAGGGATCGAACCTGTGCCCATGCAGTGGAAGCATGGAGTCCTAGCCACTGGACTGCCCG EMBV3_39552 GGTAAAGTACCCCATCTAAACCCAGTTAACAGCCTTGCCTGCAGTCCTGGGACGTATATC Gene GeneID:783009|FKBP15:XM_002689935:87_cdna Constitutive 0 NULL GeneID:783009 8 GENE FKBP15 NULL FK506 binding protein 15, 133kDa EMBV3_31662 GTCCTGTGATGGCGTAAACGCGGTACTACACAGTGACTTGCTCCTCACCCTTGCTAAACT Gene GeneID:282516|RAP1GDS1:NM_174666:5_cdna Constitutive 0 NULL GeneID:282516 6 GENE RAP1GDS1 MGC137736 SmgGDS RAP1, GTP-GDP dissociation stimulator 1 EMBV3_33612 CACTGTGTGGGAAACACCTACAAAGCTGAAAGAGCCAGGTACTTACCCGATGAGCAGAGG Gene GeneID:613832|LOC613832:XM_002707718:161_cdna Constitutive 0 NULL GeneID:613832 12 GENE LOC613832 NULL similar to rCG52146 EMBV3_37124 GCGCTCTGTGCTAGATCCTGTCTTAAGGCCTCCCTTTCTCCCACCATGAAGAGCCATGCT Gene BVT0102_050835 + 0 NULL GK000029.2:48194211-48216981 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36921 AGGGACCAATTCCGTCTCTGTGGGAGCAGATGAGTTGACCATAAAGACTCTCATTGTAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07535 CCCTGGGGTCTTCGATTGGGGTGCAGTGTGCAACTCCTGGCCGACTGATTGACCACTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27044 TGGGTGGCCGCGAGATCCTCAAGGGCAAACTCTTTGACTCTACAATAGCTGATGAGGGAA Gene GeneID:532693|NUDCD2:NM_001040553:11_cdna Constitutive 1 NULL GeneID:532693 7 GENE NUDCD2 MGC133489 NudC domain containing 2 EMBV3_26207 TGACCCACTCTTGTCTTAATGCTAAATGCTAACGTAGTGAGAAAGTAAAATGCAAACTGC Gene GeneID:539379|ABRA:XM_002692751:82_cdna Constitutive 0 NULL GeneID:539379 14 GENE ABRA NULL actin-binding Rho activating protein EMBV3_03230 TTGGAGAAAGCGGGCTCAACAGCCAGCATGCCGAAGAAAAGGGGCCATCAGAGGTCGTCT Gene GeneID:528006|LOC528006:NM_001075905:1_cdna Constitutive 0 NULL GeneID:528006 X GENE LOC528006 NULL similar to Histone H2A-Bbd (H2A Barr body-deficient) EMBV3_03783 ATCCACTTTCCCCAAGTTTCTTGCAGTCAGGATAGCCCAACGCCGAACCATTTCATTGGG Gene BVT0102_011753 + 0 NULL GK000011.2:102409428-102492141 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029223 TCONS_00029217 TCONS_00029219 TCONS_00029224 TCONS_00029221 TCONS_00029218 TCONS_00029225 TCONS_00029222 1 XLOC_015690 Coding TCONS_00029224 XLOC_015690 Coding Coding SETX 11:102371979-102452693 = TSS20364 8400 2 TCONS_00029224_5 1376 24 0.896224895617806 0.00482871120769713 0.00298772905004906 0.00340521968062453 0.00353628717361567 0.00240937492006383 0.00130653456234465 0.00174647846280524 0.00240881559905004 0.0032721177377485 0.00166013151238344 0.00114013678196479 0.000331769583233705 0.000368495442579902 0.0012819273472306 0.00103452768637461 0.00586566854252136 0.00261959917465793 0.00379609392569605 2.26981353307207e-28 0.000549648297815267 0.000961103967609546 0.00242732096193903 0.000808751550613224 0.00285150771891886 0.00177433059564235 0 0.00157001636508498 0.00154977634210127 0.00111878089263954 0.00105822583732576 XM_002691649.3 SETX PREDICTED: Bos taurus senataxin (SETX), mRNA. 0.0 1.513e+04 99.96 0.999880952380952 NM_015046.5 SETX Homo sapiens senataxin (SETX), mRNA. 0.0 8392 81.93 0.999880952380952 TCONS_00029224_5 sp|Q7Z333|SETX_HUMAN SETX_HUMAN Probable helicase senataxin; 0.0 2080 76.55 0.998546511627907 0 coding 0 0 1 1 -0.0220033345159929 0.880944081262967 -0.0227852853324122 0.668467871461035 ATGAGTACATGTTGTTGGTGTACCCCAGGTGGTACTTCCACCACTGACTTCCTACAACGCTATGCATCCAGGACCCACTCCAGTGAATTTCAGACAGCTGATGAAGACCTCTGCTACTGCTTGGAGTGTGTGGCTGAATACCACAAAGCAAGGGACGAATTGCCGTTCTTACATGAGGTTTTATGGGAATTAGAAACCTTACGTCTCATAAATCACTTTGAAAGATCCATGAAGGCAGAAATTGGAGATGATGATGAGTTATATATAGTAGACAACAACGGAGAGGCACAGCTGTTCGATTTCACTGGCCAAGACTTTGAAAATAAGCTTCGAGTTCCTCTTCTTGAAATACTGAAATATCCATATCTGCTTTTACATGAGCATGTCAATGAATTATGTGTTGAAGCACTTTGCCGGATGGAACAAGCTAATTGCTCCTTTCAAGTTTTTGACAAACATCCAGGGATCTATTTATTTTTGGTTCATCCCAATGAAATGGTTCGGCGTTGGGCTATCCTGACTGCAAGAAACTTGGGGAAAGTGGATAGAGATGATTACTATGACTTACAGGAGGTTTTGACTTGCCTTTTTAAAGTTATTGTTTTTTTACTTTTAGAAAACCCAGACATTTATACTTCTTCTGTCCTTGAGAAGGGTAAACTGGTTCTTCTGCCTTCACACATGTATGATACTGCCAACTACAAAAACTATTGGTTAGGTATCTGTATGCTGCTGACCATTCTTGAAGAGCAAGCCATGGATTCACTGTTGTTGGGCTCAGATAAACAGAATGATTTTATGCAGTCAATACTTCACACCATGGAGAGGCAATCAAATGATAATAGTGTGGATCCTTTCTGGCCAGCATTACACTGTTTCATGGTGATTCTGGATCGCCTTGGATCTAAGGTCTGGGGTCAACTTATTGATCCTATTGAAGCATTTCAAACCATTATTAACAACGTGAGCTACAATAGAGAGATCCAGAACATACGGAACAGCTCTGTGAGGACCAAGTTAGAACCGGAGTCATATTTGGATGATATGGTGACTTGCAGCCAGATTGTATACAATTATAATCCTGAAAAGACCAAAAAGGATTCGGGGTGGAGATCAGCCATTTGCCCTGATTATTGTCCTAACATGTATGAAGAAATGGAAACATTAGCTAACGTGCTCCAGTCAGACATTGGTCAGGACATGCGTGTTCATAACAGCACATTTCTGTGGTTCATCCCTTTCGTGCAATCCCTCATGGACCTGAAGGATCTGGGTGTGGCTTACATAGTGGAGGTTATTCACCATCTGTACTCTGAAGTCAAAGATGTTCTCAACCAGACAGACGCTGTGTGTGACAAAGTCACTGAGTTTTTCCTTCTGATTTTGGTGTCTGTGATTGAACTGCATAGAAATAAAAAATGTCTACATTTGCTGTGGGTTAGTTCCCAGCAGTGGGTGGAGGCTGTGGTGAAGTGTGCCAAGCTCCCAACCACAGCGTTTGCACGGAGTTCTGAGAAGTCATCTGGAAACTGTTCCAAAGGCACAGCAATGATATCATCCCTGTCACTGCATTCAATGCCCTCCAACTCTGTGCAGCTGGCTTGTGTGCAGCTGATTAGAAGTCTCCTGAAAGAAGGCTATCAGCTTGGGCAGCAGACTCTCTGTAAGCGGTTCTGGGATAAGCTCAACTTATTCCTGCGAGGGAATTTATCTTTAGGTTGGCAGTTGACTAGTCAGGAAACCCATGAGCTACAAACTTGTTTAAAGCAAATTATTAGGAACATAAAATTTAAAGTACCTCAGTGTAGCACTTTTGTGGATCTGAATCCTGCATGTAAGATGCCTCCTGCATCTTATAAAGAAGAAAGTGAACAAATAGGGAAGAAGTCTGAAAAAGATGTGCACTGTCTAGAAAATTCCAGCCCAACATCTTCTAAAGAACCAATGAAAGCTGATGCATATCAAGTGCAAGAGAGTATTTTGAGCAAAGCAAACAATGCCATAGAAGAGAGTAAAGAGCCATATTATATAAAAGATTTGAAACTAGAAGGCCACCTCTCAGCTGAGTCATGTTTGAAACTGAGTAGTAAAAACCTTGCCTGTGAAAGAGTTCAAAATCAAGTTAAAATAAGTACAGGGAAATACAAGTCTGTAAAAGAGAATTCCTCATGTACCCCACAGAATGGTACTTTAAGAAATGGTCCAGAAAAAGTATTTGACAGAGGAATAATAATATCAAGGCGCTTATTGACTGTTTCTAGCACGGATTCTCTGGAAAAAGTGTCTGCCTCCGATGAGGACTTCTCGTTAAAGGAAGATGGTCTTGGCAAAAGCTCAAAAGCAAAATCTAAGACACATAAAGATGGAGTCTGTGCTAAGTTGTCACATGTAATAAAAAAGCAACGCAGGAGAAGTATCAGTTTAGAGGAAAACCTGACTGTATCTAGCATTGAGGGTTTCTATTCAAAGAAAGATCTAGGAGGTCAGAAAGGAGGTGGAAACATATGCAATCCTTCTTTAGTCCCTAATGGTATTCTGGATGATAAAAATGGAGAACAAAAATCTCAAAGCTGTTTACTGCTGAAAAAGAAAGAAGTAAAGAAAGAAAAGTTAGATCTTTTCTCTACCCCTGAAAACAGTTGTCAAATACAGGAATGTCATGTTGATAGCAAAGATTTGGTCTCACTCACAGAAATGACCAGTATCTGCATGACGAATGCATCTCCCTTTAAAGAGCCTGTGACTGGACATGAATTGAGAGATAGGAAAATTAGTAGGAGCACTGATCAGTTTTCTTCTAATTTAAGAGAACAGGACCTTAGCAGCAGTCCCCAGCCTGACACCTTAACAGATTCTCAGGTAGATAGAGACCTCCACAAATTATCTTTAATAGCTCAAGCCAGTGTTACTAAGTTCCCATCAGATTCAACTGAAAAAAGTTTATCCCAAATACAAAGAAAAGTAAAAGATGAGAAAAGATGTTTCACGGCAAACCAAAATGTCAGGGAAACCTGCTGTGGACAGGTTATTATTATTTCAGATTCCGATGACGATGAAGATGAGGAAAGAATTCTGGGTTTGAAGAAACAAATGAGAGAGGTCAAAGCATGCATTGAGAAAGAATGTCCAGAGCAACATACTTCAATAGCTAACACAAATGTGGAACAGAAGGTATTAATAAAGGAAGAAAATCCAGTGTCCCTTTTGGAGTTTGAGGAATCTGATTCTCAGTTTTTTGAGTTTGAGACTCCATGTGAAGTGTTTTCAGTTTGGCATGATCAGAAACCAGACAAGAATTCAGCTCAAGAGAATGAAAAAAATCCATGCTCGACTCATGTGGGTGATAGTGCAAATGATTTGGGTTATGAGACAGATTATGTGCCTGAAGAGGTCATTAAAAAAGTAGCAGAGAACTTTGAAGAGCGCACAAAACCACGTAGTAGTAGTACTTCTGTTGAGGAATTTTGTGAAATTGAAGTAAAAAAACCCAAGAGAAGACGGTATGAAAAACCTATAGCTGAAGATCCTCTAAGGCCTTCTTCATCTTCTGTTAAAAATGAGGACCAGTCTGATATTCTTAACAAGGGAAATCTGAGTAAAAATGATTTTAAAGGTGTAGACGCAAGATCTACAGTTCCCAGTTCAAGTGTTCAGAGAAACACTGTGGTTTCCCCAAAGAAGTCTCTTCCAAAGCCTCGCATGTATTCCAAACCTGTCAGGAAAGTTCCAGTGGTTAAAGCTTCTAAGAAATCCCATTCAGATACCAAGAAAGGGCAGAGTAAAAGCTCCCATTACATAAGTTGTAGAACAACTCCTGCTATTGTGCCGCCAAAGAAATTTCGCCAGTGTCCCGAACCAACTTCAACGGTTGAGAAACTTGGCCTGAAAAAGGCTCCTCGTAGGGCATTTGAATTGTCCCAGCGATCTTTAGAGTGTATAGTTCAGCTCCGTGACCATGGCAAAACTGTTGGAGTAGTGGATACCCGGAAAAAGACGAAGTTAATTTCTCCTCAGACTCTCTCTGTCAGAAATAATAAGAAACTGCTGACGAGTCAAGACCTTCAGTTGCAAAGGCAGATGAGATCCAAATCACAACAAAACAGACAACGTTTTGATTGTCGAAGCCACTGATACAACACGAGCAGGGCCACGTGCTGCACAGAGCTCCCCCTGTGCCAGAATCAAGTAAGTCAGATTACAGTCATGGAGGAGCCGAGGTGACTGCTAACAATAAGGGAAAACAGTTACTAACATGTCAGTCTTCTGAAACAGAACCCGTGAAAGCAAACCAGTGTAATCCTGTCATAGTAAATGGAAGAATAGCAACAAATGAAGTCATTGTTCCTACCTCAGAGGACCTGTTAGACAGAGGTGACCTAACAGTTCATCATTTAGAGGTGGCGACTTTGAAAGAGGGAGAGCCTCAATTCAGCAGTGACATAGAGGAAGATGATATATTCTTAACACAGCGTGACCCTGAAGACATGGATTTATGTTCACAAATCGAGAGAGAGAATGATAAACTCATTGAAGTCATTCATGGAAAAGATACAGTGCAGGGAGAGGAAGAATGTGTGAGTCAGCCTCAGTTGGAATCTTTGAGTAGCACAAAATGTAAGTACAAAGATTGTGTTGAAACTCTGAAAAACCCAGGTGAGTACTGCTCAAAACACTCAAAAACTAAAGCCACAGATGAAGATGTATTCCGTAAACCTGGCTTGCCTCTGTCTGCATCAAAACGTTCGAGACCTTCCACGACCAAGGTTTTTAGTTCAAGCAGTACTTCACGGATTGCTGGTCTCTCCAAGTCTTTGGAAAGTACCGCAGCCCTCCCATCATCTCTGAAAAATAAGTCAAGTGGGGCACAGTCTGTTCTTAAAGGACCACAGCCACCCCTTACGGTGTCTCTGAAGCCAGTGGCTGAAGTGAAAGGTCTGTGCAATGTTTTCCCTGCTCAGACTCCAAATAACTCCAACAGGCAAGTTCTGAGAGTTCCATTTGGGGAAAGCAGACCTTTTTTGACTTCCTCTCCAGTAAACATTCTCACGTCGTCACAGTCCATCTCTGATACTTTTGTAAAAGAGGTCTTGAAATGGAGATATGAGATGTTTGTGAACTTTGATCAGTGTGGGCCCCCGTCGAGTCTGTGTCAGTCCATCGAAAGACGGGTGCCTATCAGGTTTCAAGACTGTGGAGATTATTTTAATGTGTTTTTCCCTTTGATGGTCCTGAATACTTTTGAAACAGTGGCACAGGAATGGATCAGCTCTCCAAACAAAGAGAAATTCCATCAGTTACATTTACGAAAATTTCCTGGTGATTATAAAAAATACTGGGAGTTTGTGGTTTATCTTGAGGAATGTGAGCTAGCTAAACAGCTTCATCCAAGGGAAAATGATTTGGTGTTTTTGGTTCCTGAAAGACTCAATGAGGAGAAGAAAGATTTAGAGTGGAGTCACCTGGAGGATGCCTGTGAATATTATTGTGGCTATGTTCATAAATTCCGTCGTACTTCAGTCATGCATAATGGGAAATTTGAGTGTTCGGTTTCCATCCAGACTCAAGATAATTTACCAGTCAATTTAAATGAACTCGTGAAATGCTTTGTAATCAGCTCTCTGGTGACTACACAAAGGAAGTTGAAAGCCATGTCTTTGCTGAGTGGTCGGAACCAACTGGCCAGAGCCATTCTGAATCCAAACCCCATGGACTTCTGTACAAAAGATTTACCAACTGCAACATCTGAGAGAATTGTTGCCTACTTAAAAGATTTCAATGAAGACCAGAAGAAAGCGATAGAAACTGCATGTGCCATGGTGAAACACTCCCCATCAGTTGCCAAGATCTGTCTGATTCATGGACCACCTGGAACAGGAAAATCAAAAACCATTGTTGGCATCCTGTACCGCCTGCTGACAGAGAACCAGAGGAGGGGGTATTCAGATGAAAACTCCAACGCCAAAATCAAGCAAAACCGTGTCCTCGTATGTGCTCCTTCCAATGCAGCTGTTGATGAACTTATGAAAAAAATTATCCTTGAATTCAAAGAAAAGTGTAAAGACAAGAAGAATCCTATGGGAAACTGTGGAGATATAAATTTAGTACGTCTAGGTCCAGAAAAGTCTATTAATAATGAGGTCCTGAAATTCAGTTTGGACAGTCAAGTTAACCACAGAATGAAAAAAGACTTACCGTCTCATGTTCAGGAGATGCACAAAAGAAAGGAATTTCTTGATCATCAACTTGATGAACTTTCCCGCCAGCGTGCTTTATGCCGAGGTGGAAGGGAATCGCAGAGGCAAGAATTAGATGGAAAAATTGCCAGAGTTTCAAAAGAAAGGCAGGAGCTTGCTTCTAAAATTAAAGAGGTTCAAGGACGCCCACAGAAGACACAGAGCATCATCATCTTAGAGTCACACATCATTTGCTGCACCCTGAGCACGAGTGGTGGCTTGCTGCTCGAGGCTGCTTTCCGTGGGCAAGGAGGCGTCCCCTTCAGCTGTGTCATCGTTGATGAGGCTGGACAGTCTTGTGAAGTTGAAACTCTTACTCCGCTCATCCATCGTTGCAACAAGCTTGTCCTCGTAGGAGACCCTAAGCAGCTCCCTCCCACAGTCATTTCCGTGAAGGCACAGGACTACGGCTATGACCAGTCGATGATGGCCCGCTTCCACAAGCTCCTGGAGGAGAGTGTGGAGCACAACATGATTGGCAGGCTGCCCGTCTTACAGCTCACCATCCAGTACAGGATGCACCCGGACATATGCCTCTTTCCTTCTAGTTATATTTATGATGGAATCTTGAGAACAAATAGAGGGACAGAGACCAGTCGGTGTTCATCTGACTGGCCATTTCAACCCTACCTCGTGTTTGATGTTGGAGATGGCTTAGAAAGACGGGATAATGACTCATATGTAAATGTTCAAGAGATAAAACTGGTAATGGAACTAATTAAACTTATTAAAGACAAACGAAGGGACGTTACTTTCCGAAACATTGGCATAATAACCCATTACAAGGCTCAGAAGACAATGATTCAGAAGGATTTGGACAAAGAGTTTGATAGAAAAGGGGCAGCAGAAGTCGATACCGTGGATGCCTTCCAGGGGCGTCAGAAAGACTGTGTTATTGTTACATGCGTCAGAGCAAATGCCACACAAGGCTCAATTGGATTTCTGGCAAGTTTGCAGAGATTGAATGTCACCATCACACGAGCCAAGTACAGCCTCTTCATCCTCGGACACTTGAGAACCCTAGTGGAAAATAGACATTGGTATCACCTGATTCAAGATGCACAGAAACGTGGCGCCATTATTAAGACTTGTGACAAGAACTACAGACACGATGCAATGAAGATCCTGAAGCTCAAACCATTGCTTCAAAGGAGCCTTACTCACCCTCCTGCTGTCGCTCCAGAGGCATCCAGACCCCAGGGTGGCCTACCCAGCAGCAAGCAAGATGGTGAACTCAGCAAGACATCTTTTGCTTCTTCCCTATACCACTCACCCTCTGACTCCAAAGAAGCCACAGTCACTGAGGCTGCAAAGGATCCTGAAAGGCCACCCAATCAGGACTGGCTTCGGGACCCAAGACTGCTGCGGAGGATGGGCTTGGCCTTGGATGCCCAAGGAATAAGCCTCAGGGAGCCGCAGCCCTTGAGCCCCCAGCATTCCGGAGCAGCGCCTCCTTTGGGCACCCCAGGCTGCCCTGGGAGTCCCCAGGAGCCAGGCACCATCAGGCAGCAGGGAGTCACCCTGAACAACCACACGCCTCACATGCAGTGTGACTCTCCAGTTGCTAGTACTGACACTTCCACAAGCAAAAAGAAGTGTGACCAGGAAGAGGGGGTGCTCAGCCACAGGAGAGAAACCAGGTCCTTGAGTGTAGGGGATCAGGAGTGGTGGGCTAGCTCCCACGCAAAGAGGAACTCAGACTGGGATGAGAGGGTCCTGGAGGAGGACAGCTGCTCAAAGAAGAGACGGGTTTTATAGTACGGCCGAACAGCAGAGGCTGTCAGCCGCGACCATTGCTGCAGACCTCTGATGACTGACTAACAGGCTTGTCCAGATACGACTGCTTTTTTCCTTATAGGAGTTTGTTGTTGGAAAACAAAACGTATTATAATACATGGGCCTCTTGGTCCTTTCTGTCAGTTGCAGAAGCTTTCAGAGGACATTTGTGCATCAGTAATTATGTCTTTGAAGTAGGAGGCTTGCAGTGTTGATCTCTCGTTCTTGTAGAAAAGGAGGTCAGCCTGGAGAGGTTGTAGAAGTTGGAATGTATATTTGTATAGCAAATAACAAAATCCTTTTAAAATTTAATCTGGTAGATGGCTTTTCTTTCCCCTGCTTAAAATGTTAATCATTTTCAATAGAACAAACCTTATATTAAAAAAAAAAA EMBV3_29851 CTCTGAGGAAAAGATCTGGGAAATGCTGGGTATCGTGGGGCTGTATGCTGGTATGAACCA Gene GeneID:519242|LOC519242:XM_002699671:42_cdna Constitutive 0 NULL GeneID:519242 X GENE LOC519242 NULL similar to melanoma antigen family A, 10 EMBV3_36581 GTGCAAGCTCAGGGCCTCTGACTGGATCGCACAGCTCTGCCTTCTGCTGGAAAAGTGACT Gene BVV0102_276066 + 1 EMBV3_39588 GK000018.2:1694463-1748256 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087955 1 XLOC_052743 NonCoding TCONS_00087955 XLOC_052743 NonCoding NonCoding - 18:1728280-1728900 - TSS65301 620 1 TCONS_00087955_1 49 1 0 0 0 0 0 0 0 0 0 7.635606146012e-05 3.31813631331824e-05 0 0 0 0 0 0 0 0 0 0.000231981061677183 9.79270414517174e-06 0 0.000207155994858964 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0117048241919125 0.928600857490195 0.0234390145968735 0.625358951190813 CCTTTGCGGTCCTCACAGCAGCTGACATTGCCACTTGGCTGAAGTGGTAAAGCAGATTACCTGCCTAGCAACCTTGGGGCTCTTTCCCCGCAGGGGTCCTGCCTGGGTCATTCACAGCGTATTATCAGCTCCGCGGTGACAAGGACGGTGGCTTAGCCAGAGCCAGGGAGGAACGGAAGCAGGTGTGCACTGGTCTCGACAGTTTACCAGCCACCTGCTCTCTGCCCCCTGGAGCTGACTGTTAGTGAGCCCGGGGAAAATGCGGGCACAGGGCAGGACTGCGTCCGAGGGGGTTGGCGCTCGGAGCGCCTCTGTGGCACTGGGCAGGGTGCAAGCTCAGGGCCTCTGACTGGATCGCACAGCTCTGCCTTCTGCTGGAAAAGTGACTCCGGAGGATGCAGGCTGAGCGAGGGGCCCACCCCTGGGCTTCTCTGCACCTCCAGTCCCGGGGGAGAGAGACGACATCGCTCCCTTTAATCTCCTGGTCCAGGCGTGGATGCAGACACCTCCTTTGGGTTTTCATTAACATAACTGTCACAGGCTGACCTTTCCAGAAGACATTAATAAATATAAAAGGAGAATAAAAGAAAGCTAAAGATAAGGTATATGAAAAATAAAAA TCONS_00082065 TCONS_00082066 TCONS_00082067 TCONS_00082068 . 5' 19357 TCONS_00082065 TCONS_00082066 TCONS_00082067 TCONS_00082068 . 5' 19357 EMBV3_23245 CTTCCGGAGACAGCTCCTCTACTGGTTCTTGAAGGTGTATGAATTCCTCTCCACGTTCAT Variant GeneID:505640|PLTP:NM_001035027:883_cdna 603^758 1 EMBV3_20961 GeneID:505640 13 GENE PLTP NULL phospholipid transfer protein EMBV3_14557 TCCCCATTTTACTGGTGAAGGTATTGGTGTTAAAGGACTCATGTCCAGAGACCCGAAGTG Gene GeneID:534416|LOC534416:XR_084690:81_cdna Constitutive 0 NULL GeneID:534416 5 PSEUDO LOC534416 NULL similar to WW domain-binding protein 11 (WBP-11) (SH3 domain-binding protein SNP70) (Npw38-binding protein) (NpwBP) EMBV3_43103 TTTTGCAGCTAGTGAAGGCCATTCCCACCCTCGGGTAGTCGAACTGCCAAAGACAGATGA Gene GeneID:528379|LIN7A:NM_001079602:6_cdna Constitutive 0 NULL GeneID:528379 5 GENE LIN7A NULL lin-7 homolog A (C. elegans) EMBV3_39637 GCTAAACAACCAAGGTGACACATAGCTATTCCAAATTCTGTACACAATTACAACAGTTAG Gene BVV0102_383888 + 0 NULL GK000015.2:7914615-8091623 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26576 GGCTAGTAAAGCTGTGAATGGACGCACCATTGAACTGGCAAAGCTGATAGTCTTTTTGGC Gene GeneID:613655|FBXO47:NM_001083759:165_cdna UTR3_Alt 2 NULL GeneID:613655 19 GENE FBXO47 MGC155051 F-box protein 47 EMBV3_43589 AATAGGTTCTGCGAGTCCTTAGCCTTTCCTCCTGCGTTGGGTTTGCCGTGTCATCTGGAA Gene GeneID:614816|CHFR:XM_002694445:31_cdna Constitutive 0 NULL GeneID:614816 17 GENE CHFR NULL checkpoint with forkhead and ring finger domains EMBV3_32181 TTTGTACATTGTGACCACAGGGGGTTGGTCTCCCCATGTCAGGGTTTTCTGGGTGTCTGT Gene GeneID:616397|ZMAT4:NM_001076943:103_cdna UTR3_Alt 3 NULL GeneID:616397 27 GENE ZMAT4 NULL zinc finger, matrin type 4 EMBV3_18567 AGAAGTCATTTTACAGGGGTGGAAATTTGAATTGTAAACCTGCATCATCTCTGTGAAACC Gene BVV0102_079088 + 0 NULL GK000010.2:28509713-28548985 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21065 CTGCGTTTTAGCACTACTTCCTGAGCCCACATCCTCGGGCTTCCGCTGTATGGCTATTTT Gene GeneID:768075|RCL1:NM_001077131:63_cdna Constitutive 0 NULL GeneID:768075 8 GENE RCL1 MGC137647 RNA terminal phosphate cyclase-like 1 EMBV3_02327 CGAAAGCATAAGTCTTCCAAGTCAAATGAGAGTTCGGACTCAGAATGACGAGAGCCTGGC Gene GeneID:615312|RP9:XM_002686826:2_cdna Constitutive 1 NULL GeneID:615312 4 GENE RP9 NULL retinitis pigmentosa 9 (autosomal dominant) EMBV3_22750 TGGAACCATCAAGCAGAAATCACTGCCCTCTTTCTTAGGCTAGCTGTCCTGATCTGTGGC Gene GeneID:613599|LOXL3:XM_002691190:107_cdna Constitutive 0 NULL GeneID:613599 11 GENE LOXL3 NULL lysyl oxidase-like 3 EMBV3_22701 TCTCCTCTGAGCCATACAGGTGCCATTTCTTTCAGAATTCCTAAGGCCCAGTCTGCACTG Gene GeneID:510874|FBXO17:NM_001103239:592_cdna Constitutive 0 NULL GeneID:510874 18 GENE FBXO17 MGC151692 F-box protein 17 EMBV3_22548 CTTCTGAGTATTGCATGAAGGCTACCAAGTTGGAACAGGCGAGTCCTGGATGTGAAAGCT Gene BVT0102_078901 + 0 NULL GK000013.2:80263639-80297253 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009942 TCONS_00046532 TCONS_00044169 TCONS_00046533 TCONS_00046531 3 XLOC_005494 XLOC_026729 XLOC_026138 Coding TCONS_00044169 XLOC_026138 NonCoding NonCoding SALL4 13:80295498-80297418 x TSS32522 1513 1 TCONS_00044169_2 59 0.123595505617978 2 0.212610734757686 0.0147636579124936 0.0321986029598211 0.0164541425947177 0.0138993342398892 0.00958844422990617 0.00907508672691457 0.0144016161090862 0.0108498566309146 0.0174538842670089 0.0131202284400035 0.00793556026546024 0.00409269907035359 0.00307712973118669 0.00999847084091831 0.00746084406911518 0.0313644118499811 0.0504223260674403 0.059418595009679 0.0195706889715737 0.0195415169589078 0.0122035355424627 0.0172882109605149 0.0204052635798163 0.0204806749143976 0.0227877638401622 0.030632710541984 0.00850884620319021 0.014317475229744 0.00536570463470451 0.0197029802415393 XM_005214828.1 SALL4 PREDICTED: Bos taurus sal-like 4 (Drosophila) (SALL4), transcript 0.0 2154 100.00 0.788499669530734 0 noncoding 1 0 0 0 -0.306260237568883 0.209572574564876 -0.41172847153464 0.000155230009376779 GTCACTTCAGTCATGCCACCTCTTTGCAACCCCATGGACTGTAGCCCGCCAGGCTCCTCTGCCCGTGGGGTTCCCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCTGACCCAGTGTGTCTCCTGCGCTGCAGGCAGATTCTTCACCACTGAGCCACTGCGGAAGCCCCTATCCTACTTAGTTGGGTGGAATTTCTCCCAAGGCAGCTGGAAATGATTGTCAGGAAAGGACTCTCAGGTGTGGAGCAGAAACTAACAGAAAAATTTACATACACGCCTGGTGGTGAAAAAAAAAGAACCATTCAAAATTTATTCTCCAACAGACAGACAGCATCAGCAGGTAAAAACTACAGGGGTTTCTCCGTAGATCATACATTCACAAGGCATTATTAAGCTTAACAAGTGAGAAAGCCTCTGGTCTATCTTCTGTAACAATATCCGCTTCACAGTGTAAACAGGCACTACCATTGTGTTCACTTACAATTCCAGAAGGAAAGGCACAACTTGGCAAAACAAAACAAAAAAACTTGAGGGGGGGATCCTAAAGTCAGGTGCAATTACCAAGAGACAAGACTTGAGAAAAGCCACAATCCACTCTTCCAGAGGGGCAAAGACTTCCCCACCTGGAAATGTGGGTCTTTCTCCTCGCTTGTTAAATCTTCAAGAGGAACGCTTCATCGTCTGCTTAATATCACATATACAAAAGGGGTTAGGGTTAGAAGAAAAAAAAGAATCACAACATCATCTTGAACTTCCAGCTGCTCCCACCAATACATCAACTCTTAGGTTTACGATAGGGTCTAGGAACACTTCAGCGGTCATCCGATAGGAAAATAGAGACTATAGCTACAAAAATAACACACGAATGAGGTAGATAAATTAAAGCTTTCACATCCAGGACTCGCCTGTTCCAACTTGGTAGCCTTCATGCAATACTCAGAAGAAAAAAAAAAAATCTTCATAATTACTCGGCATTAAGTCACAATCAAGGAAATGTTGGTACAAATTAGTGTAAGAAGTTTTTAGTATATAATAAGAAAACATGCCCTTCCATGAGTTTGTTTCTTCAAGAATGGACACCGAGCTCTTCAACAGAGCAGGCACACTGGTGAACTAAGTTACCTCACCTGAGATTCCCTGCTCAGGTGTTCACCTCTCCTGGTTTTAGGAAGAAGGTGGCATCTGGAAGGGTAGAGAGGACCTTGGCACTCTTGAGGCTCCGACTGAACTGTATTTAAATAAGCAGCAACACACACACTGACTCTCTCAGGACTGAAATCAGTCCACTGGAGGGCGTCCTACTTAAGGTTCCAAACTTGAAAAACACCTTGGAATTCTACAACCTTGGTTTTCAAAAAAAAAAGTACATTCAAAAAAACAACAGAAAAATGGGTGCAGGGCTGGGAGAATATGAAAACAGGTCCCGAAACAGATGACAGACCATGTCCATTTACCCGCATACAGTCCCCGCAGAAGTTCTCTAGAGAGGTCGCT TCONS_00046531 TCONS_00046534 r 5' 0 TCONS_00046531 TCONS_00046534 r 5' 0 EMBV3_23562 CATCAGCTGTTCGCGCGTCTTCTCCTCCAGGCTGCCTGCAGGGCCGCTGGGCATCTGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04173 TAACACCCCGCAGAAGTACGTGCAAGACATCCTACAAGAGCAGCTGGCGGAACCCGTGTA Gene GeneID:100336697|LOC100336697:XM_002686075:341_cdna Constitutive 0 NULL GeneID:100336697 3 GENE LOC100336697 NULL nitric oxide synthase 1, neuronal-like EMBV3_20709 GGGATATTGTCCTTTCAAACAGGCCATCTAAGGCAGCTAATTATGCATTGCATTGGGGTC Gene GeneID:510019|FAM49B:NM_001046047:14_cdna Constitutive 1 NULL GeneID:510019 14 GENE FAM49B MGC127316 family with sequence similarity 49, member B EMBV3_38766 CAGTGGTGGCCAGCTCCCTGAATGGCTTCTTGACCTAAAGCAGAATATTAGCCACCCTCA Gene GeneID:100337190|LOC100337190:XM_002690398:15_cdna Constitutive 0 NULL GeneID:100337190 9 GENE LOC100337190 NULL testis-specific protein-like EMBV3_12846 TGCACTCTGCATCCACCTCTGTAACAAGGCACCGCTAAGCAAGCATTGTCTGTGCCATAA Gene GeneID:282323|PRKACB:NM_174585:14_cdna Constitutive 1 NULL GeneID:282323 3 GENE PRKACB NULL protein kinase, cAMP-dependent, catalytic, beta EMBV3_38590 AAGGTGGTTTGGTGGGCGTCAAATCACTGCCCAAGCGTGGGATGGAACTACGGATTATCA Gene GeneID:526910|HTATSF1:XM_002699606:156_cdna UTR3_Alt 2 NULL GeneID:526910 X GENE HTATSF1 NULL HIV-1 Tat specific factor 1 EMBV3_23830 AAGCGTGGGCGGACAACCTTTCAAGGAGTTCAGCTACAGAGAGTAGGAACAAGGCAAGAG Gene BVT0102_062798 - 1 EMBV3_40892 GK000012.2:81287033-81548488 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041222 1 XLOC_025029 NonCoding TCONS_00041222 XLOC_025029 NonCoding NonCoding - 12:81318869-81319345 - TSS30723 476 1 TCONS_00041222_1 45 1 0 0 0 0 0 0 0 0 0 0.000314942654548528 0 0 0 0 0 0 0 0 0 0 0 2.55103679693947e-05 0 0 0 0 0 0 0 0 0 0 noncoding CCAAGGAAATCTGAAACTTACAAAGCTACTACTATTACTAAAAACACGGATTCTGAATCTTCCCTCCATCCTGCTTTTCCTCCAGTATCAGAGTCCTATCTTAGATCAGTATCTCCCTCTTCACTGGACCCGAGTCATAGGCATTTCATGAACCCCAAACCTTCCTCCCCTCCAGGTGCCCTTCCAGCTGCCCCTCTTGCCTTGTTCCTACTCTCTGTAGCTGAACTCCTTGAAAGGTTGTCTGCCCACGCTTCTCTGGTCTCCCAGATCGCACTCAGTTCTTGATTTCTGCATTCCACTGAAACTGTCTTGGCTACCTGCAGTTAGTAATACAAAGGACACTGTCCTACTTCGTTATACCTAATCTCTTAGCAAAGTTCTTTCTTCCTTCTTAGAACACTCTGGTAAGGGCGATAATCCGCCCAGTTCCCCCTCCAGTCTCCTTGGCTTGCTCTGGGTCTGCTTCTTGATAACAT TCONS_00037428 TCONS_00037429 TCONS_00037430 . 5' 7461 TCONS_00037428 TCONS_00037429 TCONS_00037430 . 5' 7461 EMBV3_02991 TCATGAGCCATGGGACCTGCCGCCTTGACTACTGTCCTAACACTCACTGCTCCATACTCT Gene GeneID:100300804|LOC100300804:XM_002698753:11_cdna Constitutive 0 NULL GeneID:100300804 27 GENE LOC100300804 NULL hypothetical protein LOC100300804 EMBV3_06888 TGGCCCACACCTGCTTCAATCAACTTTGCCTTCCCCCCTACAAGAGCAAAAAGGACCTGA Gene GeneID:520752|HECTD2:XM_002698383:24_cdna Constitutive 1 NULL GeneID:520752 26 GENE HECTD2 hmm77879 HECT domain containing 2 EMBV3_02818 AGTCTTCTATCTCTGTCCCCGCTCTACCCAGTGCTTAGTACAATTCCCATCTGTAACCAC Gene GeneID:615269|EID2:NM_001078049:745_cdna Constitutive 0 NULL GeneID:615269 18 GENE EID2 NULL EP300 interacting inhibitor of differentiation 2 EMBV3_24643 AACGAGCTCGGGTGCCTGGAGACGCCGTCTCCTAGCTTCATTTGGCCCTTCTGGGCGGAA Gene BVT0102_435539 + 1 EMBV3_09820 GK000004.2:114433470-114438014 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190353 1 XLOC_116388 NonCoding TCONS_00190353 XLOC_116388 NonCoding NonCoding - 4:114434517-114435506 - TSS142721 989 2 TCONS_00190353_3 67 1 0 0.000866693304150038 5.08009760479156e-05 3.74277818853226e-05 0 0 0 0 0 0 0 9.95299342169977e-05 0 0 0 4.9607678822719e-06 0 0 0 0.000130512334551893 0.000814397839337457 3.06949100376018e-06 0 0 0 0.000224177249134449 6.41144062848181e-05 0 9.71200944214671e-06 1.47257832332076e-05 0 NM_001199692.1 anion exchanger Homo sapiens solute carrier family 4 (anion exchanger), member 2 3e-51 206 76.74 0.302325581395349 0 noncoding 0 0 0 0 -0.0216702270589418 0.833647524366258 0.0701337167526148 0.167034049947862 CACCACCTTACAGAGCCCCGGCCCACTGGAGTCGGCCAGGGTGTGGCCCTAGAGCTGGCAGGTTGGTTACCGCCCTCAACAGACAGAAGGACAGACAGAAGCTACACTTGAAGCGGCCTTGACCTCATCCCTTAAGGAGTTGATTATAGATTTATCTTGTGGCTTCTCTCTAATTGTCTCATGATTGCATTCTTGAGGGCTGTGAACTGGATGAAAACTGCCCTCAAACAGCACTCCTCGGCGCCGCCGGAACCGACGTAGGGGCTTAAACAGTTTGTTAATTAACTCGTTTATGTCTGAACGTTTTCTGCGTACACAATGCTGTCCTTCCCTCGGTGGCAGACTCTCAGAAGCGAAACATAGATTCGCTTATCTGGAAGAATTTATAATTTAAGAAAACAAGAAATAGATCTTTAAATGACAGGTGATGACTATGAGTAGGGTTCGAGAAAGGAGGTCATGGCAGGGAATCTCTCCGAGGCAGAAGTCCCCCGGTTCGGAAAGACTTAGCACAGAGCAAGGGGTATCCAACCCGCGCCGCCATCACCGCTCTTCGACCCCACCCCCGTCCTCCTGGCAAAGATAGGGGCTTTCTTGGAGGCACTGGGGACTACAAAGGGTGGAAGGCTGGGGCTGCCTGCGGGCGCTGAGAGATTCTTGACCCCCGATGCATTGATATTTCAATTTCCTCCGAATTGCCTAATAGCTTGGTGCCTCTTTTTTTTTTTTTCCCCCCTGCCTGGGATTCCTAGGATGAGGCGGGCTTCCTTTCCGCCCAGAAGGGCCAAATGAAGCTAGGAGACGGCGTCTCCAGGCACCCGAGCTCGTTGCGGGGAAGCGCTGGGCGGCCGCCTCCCGCCGCGCGGAGGGTCAAGCCAGGGGCGGCCTCCTTGGCTCTGGGATCCGGGCGCCGCGCAGTGCTTGGCCGCGCGCCTCCGCCCCCTGGGTCTCGGCCCCACTCCCCGCCTCCAGGCCCGCCGCGCCGGGAA TCONS_00182906 . 5' 144 TCONS_00182906 . 5' 144 EMBV3_34670 TCAGTTCTGACTGTAGGGAAAGAAGTTCTGGGCTACAACACACAGTGATCTTATTCTGAG Variant GeneID:508904|DPH5:NM_001076821:65_cdna 440^564 3 EMBV3_01236 GeneID:508904 3 GENE DPH5 CGI-30 DPH5 homolog (S. cerevisiae) EMBV3_30675 GCACCCTGAGACACAACAGACCTTCATCAGGAGCTCTGTCTGTATACCCTGGGTAACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22516 TGACCCTGGACTTGACGAACTTGTTTTCCGCCTTCACCATCACCAACCTGCGGGAGACCA Gene GeneID:282272|MAN2B1:NM_174561:11_cdna Constitutive 0 NULL GeneID:282272 7 GENE MAN2B1 MANB mannosidase, alpha, class 2B, member 1 EMBV3_22096 GCAACAAGCACTGGGCCCTAAATTCCGTGGCATCTCATTTACATTGGCCATTACCCTTCT Gene BVV0102_195887 - 1 EMBV3_30969 GK000024.2:7304801-7401039 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39452 ATCCGACAGAGTTTGCTGACTGCAATTCGTTCTGGAGAGGCTGCTGCCAAATTGAAAAGG Gene GeneID:532067|COBLL1:XM_002685374:289_cdna UTR3_Alt 2 NULL GeneID:532067 2 GENE COBLL1 NULL COBL-like 1 EMBV3_40267 TGAAGAAGTCCGTCCAGAAAAACGTTAAAGGTGATGTTTTGATTAGTGTTGGCTATGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35925 AACCCTTTCTCAGAAGATAAGACAGACAAGGTGAACGGCTGGGACATGACCATGGTCACA Variant GeneID:514852|TAX1BP3:NM_001034474:102_cdna 215^292 1 EMBV3_23494 GeneID:514852 19 GENE TAX1BP3 MGC127727 Tax1 (human T-cell leukemia virus type I) binding protein 3 EMBV3_33565 TCAGAGAAGTGGCAGTACATTCGGCTGATGAGATTTTGAGCAGCACCATCAAATCTTACA Variant GeneID:517857|C3H1orf123:NM_001038130:55_cdna 191^272 5 EMBV3_15353 GeneID:517857 3 GENE C3H1orf123 C1orf123 MGC133492 chromosome 1 open reading frame 123 ortholog EMBV3_31320 CAGAAGGCAAGAAGGAAGATACAGGAGACGATAAGAGTGTTCCTAAAGACGATCACAGTG Gene GeneID:513263|RPGR:NM_001098383:25_cdna Constitutive 0 NULL GeneID:513263 X GENE RPGR NULL retinitis pigmentosa GTPase regulator EMBV3_04018 CCTGGAATGACCAGTTCCAAGGATGATTTGGCTTGTAATGATAATCTCTGCTTTCTTGGG Gene BVT0102_021093 + 0 NULL GK000010.2:36355752-36368262 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013457 TCONS_00013464 TCONS_00013462 TCONS_00013463 TCONS_00013460 TCONS_00013461 1 XLOC_008132 Coding TCONS_00013457 XLOC_008132 Coding Coding CASC5 10:36289085-36357204 j TSS9992 9078 1 TCONS_00013457_10 2341 0.0131086142322097 28 0.867142311870578 0.00174789458947289 0.00278888333082058 0.00319471802712387 0.00123469252753017 0.00132706184551952 0.00100569730939007 0.00125390637358356 0.00124010603542477 0.00161025296594748 0.000348233583033235 0.000426427623583105 4.46894752813689e-05 1.94740470670756e-20 0.000716562877182415 1.09723811169259e-08 0.00740579287420515 0.000923163129687974 0.00521862133739635 0.000404696340129013 0.000216584037084799 0.000108398828966194 0.00131331376624965 0.00272791529323091 0.00315518894168433 0.00226565688441511 0.00120553213721282 0.000103834440000152 0.000265369871102792 0.000556163214501418 0.000909414442372851 XM_001790629.4 CASC5 PREDICTED: Bos taurus cancer susceptibility candidate 5 (CASC5), 0.0 1.547e+04 99.99 0.945031945362415 NM_144508.4 CASC5 Homo sapiens cancer susceptibility candidate 5 (CASC5), transcript 0.0 7380 82.73 0.791694205772197 TCONS_00013457_10 sp|Q8NG31|CASC5_HUMAN CASC5_HUMAN Protein CASC5; 0.0 3208 69.57 0.999572832123024 0 coding 0 0 0 0 -0.223443518811726 0.461320388274436 0.0115762105781291 0.859084775070787 GGTCAAAGCACCAATGGACAATTTAAATACCATCTGGCAAATGCTGAGGAAGACACACAGAGCTACAGGAACATCTAGGAGGGGTACAAAGACCCAGAAGCAGAAGAGCATGGGACCAGGCGAGAGAAATCTAAGAAGGAGCTGCAGGTTGCAGGGCTAGGAAAGTCTTCATGATAGCGATGACATCAAAGCTGAGATCTGAAGGAGGAGCAGGAGCCAGCCAGGAAGGGGTTGATGGGAAGGAGGTGTTGGGCAGCAGGAGCATGATCCAGGGAGAGGAGCGGTTAGATTTGAATGCTTTACAGAGGTCCTCTGGGCGTTGTGAGGAGACGTGTGAAGGGGTGGGGGTTTTGTTAAAGCGGACTCAAGGCCCCACGCTGGGAGGAGAGGGACGCGCCTACAGCCAGGCTGCCTCAGCACTCGCTGGGCTCAGAAAAGTTTTTCTTCAGAAATGGATGGGATATCTTCAGAGGCTAATGACGAAAATGGCAATGTGGAGAGACCTGTTGGAAGACGACATTCTTCAATATTGAAACCCCCAAGGAGTCCTCTTCAGGACCTCAGAGGTGGAAATGGGAATGAAACTATTCAGGAACCCAATGCTTTGAGAAATAAGAAAAACTCTCGTCGAGTGAGCTTTGCAGATACTATAAAAGTATTCCAGACAGAGTCTCATATGAAAATAGTGAAAAAGTCAGAAATTTCAGAAACAGAAGCAGGAGAAAATGTCCTGTTTATACAGAATAAGAATCCAGAAGATAATTACTGTGAGATAACTGGAATGAACACATTGCTTTGTGCTCCCATTCAGACCCAGATGCCCCAGAGAGAGATTTCAATGACAGAATACAGCCATGAAAGGAAACATGCAAATGACCAAACAGTCATCTTTTCAGATGAAAACCAGATGGACCTGACAGCAAGTCATACTGTGATGATCACCAAAGGCCTTTTAGATTGTACCAAAAGTGAAAAGTCCACCAAGATAGATACTACATCGTTTCTGGCTAACTTAAAACTCCACACTGAAGATTCAAGAATGAAGAAAGAATTAAATTTTTCCGTAGATCAAAACACTTCTTCAGAAAAGAAGATAAATTTTAATGACTTCATAAAAAGATTGAAAATAGGAAAATCAAATGCTTTTCCTTTTACAGGACCTGATAAAGAAAATTCTGAGATGCCTATTCATTCCAAAGAAGCAAATAAGACCACTTCTGTACATCAAATGCATGTATCTCTTGGTGTAGATGAAAATACCAGGAATATGACTAGACTCTTTAGAGAACAAGATGATGGAATGAATTTTACCCAGTGTCATACAACCAATATTCAGACTTTTGTTCCCACATCCAGTGAGGCCAGCTTAAGGGAATTTAAAGGTGATGATATTACAGTTTATGGCAATGACTTCATGGACTTGACAATTAGCCACACTGTACAGAAGTTACCTTCAGCAGATAATCTGCCTGAAATAGAAAATCAAACTCAGGATGTCATGATGGATGTTTCAACCTGTTATGAAACTAAAGCACTAGAACAGAAGACAGTCTTTAAGGATAAACCGAATGATGCTTTTCAAGACCTTTCCTTAAACCCTGAAGGTAACATACATATGATCAGAAGTCATATTACAGGGACAGAAATTCAAACAGGCACACAGGCTACCAACCAGAATATCAGACCATTGGCCACGATCCCAGAATCTAAATATTCTGGTCCAGTTATGCAAGATGATAAGACATTTTTCTATTCTAGTTGTAATGATGTCATGGAACTGACCAAGTGTCACTCAAGTATGAGAGAGGAGAAAAATTTGGTAAAGCATGACAATAATTATTCTAAAATGTATCCCAATCCAGATGGCAGCTCTCTTCTCGGAGAGAAAACTGTTTATTCAGGAGAAGATAGCATGGACATTACCAAGAGTCACACAGTTAAAATCGATAATCAAATTTTTAAACAAGTTCAGACAAATGTACAGAAAGCAACTGCACCAGTATCTGAAAAAGAAATGATGATCCAAAATCACATAATTGTGTCAGAGAATTGGGACATAAATGTAAATTGTCACTCCGTTCCTCTTGTATCTAAGGAAAGATTACAGCAGAGCCCGGAAAATCCTTTATTTGTTTCATTGACTGACAAAAGGACTGAAATCTTCATGGATGAAGATATGGATTTGACTAAAAGTCACACAGTTAATTTAGGAAGTCAGTTTCCTCTTCCATCTTATGATCTGACATCTGAAAATACCAGTAAATCTCACTCTCACAGCAAAAGCCTTTCAGATGAATGGGAAAAAATGACGAAAGATCATATTGACCTATCCCAACAACAAAACATAATATCTAAGAACATCCCAGCTAATACCTGGGACAAAGAAAAAAGTCAAGTTTTGAAGATTTCACCCTTTCTTGATAAAGATTCTCCTCAGTCACCTGATACTAACCAGGACGTAGCAACAAAACATAATATAGTATACTCTCGTGAAGATCTTGACAAACAGGTACCACTGGGAAATAACAGAAATACAATTTCATGTGAGCAAGCTTTGTTTCCTACTTCAAAGCCATTATTTTCATCAAGAGGATGGCCTGCCATGAGAAATCATAATGTTGTTAACAGTCAAACAGTAAAATCTGTACTAGGCCAGAATTCTAAACTGCCTGAGCCACTAAGGAAATGTTTAGGTAATCCCATTCCTGACTGTTCTGACAAGAAAGTTATTTGTTCAGAGAAGGAAGAAGATATGGATCTAACCAACAGTCACACTGTCATTACTGGATTTGGTCCTTCTGAAGTACTAGAACTAAGTAAGACTAATTTAGAAAACACTAATAGCCAGTTATCAACAGTAAACAGACAGAAAGCTGTAAAAGTTAAAAAATGTAATGAAAGTCCTATAGAAAAAATGGGAGTGTTTATTTCTAATGGTATCATGGATGTGTTGGAAGACAAAAATGTACAGAAATCTGGAATTCTGAATGAAAAACAAGACGTCAAAATTTGTGGAAGAAAAAGTCTTGGCAGGCTAAAAGTTGATAAGACTGTTGTATTTTCAGAGGGAAATGAGAATGATATGGATATCACCAAGAGTTGTACAGTGGAAATAAATCATAGACCTTTACTAGATGAACATGATTCCCGTTTGGTGCCTTTGGCAGGAAATTCTAACACTGTTTTGTATGCATGTGGGCAAGATGACATGGAGGTCACCAGAAGTCACACAACTGCAATAGAATGTAAAACTGTCTCACCAGATAAAACAACTACTAGGCCTGTGGACAAAACTGTAGTGTTTGTAGATAATCATGATGAACTAGAAATGACAAAGTCCCATACTGTTTTCATTGACTGCCAAACAAAGGAGAGAACTGTGCTTCCAGATAGACCTGACTTTGAACTATCCAAAAGAAAAAGCCTAGAAAAATCAAAAGTTTCCCCTACTTCTACTGAAGAGAGTGTTTTTTTCCAGCAAAATGTCAAAAGGGATCATTCAGTCGCAAAAGTCAGCCAGCTGACACTACCAGGGAAATGGTCTAATCATGGTCCTTTAGAGAAAGCTGAAGCATTTATAGCTGATAACACGGAAGTGTCTAAATCAACCATTTGGAAAAATGACAGAAATGTACAAAAGCCTATATTGCTGAATGAACCTCTATCAGGCAAAAATCAGAGAAGGAAAAGCCTTAGACTCAAAAATGACACGACCATTGCATTTTCAAAGAATGATAAAAATGATATGGATGTCCTCCAGTGTTGTACAGTGGAAATAAATAACAAAAGTGTCCTGGAAGATAGAGAGGACTCCCATTTGGTGCCTTTGGAAGGAACTTCTAATACGGTTTTGTATACCTGTGGACAGGATGACATGGAGATCACCAGAAGTCACACGACTGCCTTAGAATATAAACCTCTCTCACCAGATAAAATAACCACTAGGACTACAGACAAAACTGTTATGTTTGTAGATAATCACAGTGATCTGGAAGTTACTAAGTCACACACTGTTCTCATTGATTGTCAAGCCACAGAGAAAATACTTCAAGAGTGCCCTGCATTTGGAATAGCAAAAAGAAAAACCTTGGGTGTTTCTTTTCCACAAGATGGTAATTCTATTCAAGAAGTCACTAAAAAACAAGCACTGGCTGTAGAAAACAAAATCGTTCTTCACAGTGAGCAAAAGCATAATGTGATACCCTTTGTTCCTACTAATACATTGTCTGGGGGTCAAGGTGAGACAGATGTCAAATTCCATAGCACTTCTGTGGAGGAAGAAGTCATGAAAGTTGTAGGCCAGGCCTATACATTGGAAAAAGCCAAAATTGAAAGCTGTCAGTTAAATAGTACAGATAGAAGAAATGTGGATTTTACAGGTAGTCCTGCAACTGCTATTTGTGGATGTGGTGATAATTATTCCTGTTTACCTAATGTTACTTCCTTTTTTGGTAATTTGGAAAAGAATGTCTTGTCCTTACATGATAAAGATGAAGATTTAAAAGCCAGTCATTGCCCAGTGCAAAATGATCTTCCTTATGCAAACAATTCAGCCAGTGATGATGATTTGAAATCTGAGGGACTGTCTCATTCTGTTCCTTGCTTGTTAGAGAAGGAAAAAGTCGTTCAAACCAATACCCAAGGACAGTTACATTGTGCCCCAAAAGTGCTAAAAGATCAAGATCTAATTAAGGAGCCCCCAAGTCTAATATCAAATGAAACTTTAGTATATGGTGAAGATTCAGGGAAGATGGCTAAACTTAACTCAAAGCCAGTGTCTTTTAAGCTTCCAAGGGATCAAGTGGAGCCCTCTGTTGATAAGGCAGAACACAGTTTAAAGAAGACCTTTGTTGATGATGTTTCTCAGCATCATCTGTTAACCCAACTACCTCCATTACCTCAACAAGGACAGAATAGTGTCAATAAAGATGAAGCAATATTGTCTAAAGCTGGAAATAATTTAAATATTGTTGGAGGAAATTCCTCTGAACCCACATGTGAAAACAATTCCACAATGCTCTATAATGGGAAACAGTTTACTATGGCCTATAAAAAAGAACCAAAGAAAAATATTCAAACAGCTAAATGTAATACAGCTATAGATTTCCACAATAACTCAGCCTTGACTAAGCAAGTTATTCAAACTCTTATCAATCCTCGAGAAGCATCAGATCCTGTGATTGCATCCAGTGTTGCAACTTGTAGTAGTGTCAAACCAAATCTGAATAACTTAAATGGAAAAACTGAAGAATTTTTAGATTTCCAACCAGTTCATTTACCACCTTCTCCAGAACAGTTGCTTGAATTAGTAAATAAGGCACACCGTGATATGAGTATAGTGCAAGCTACAGAAGCACATAATGTTAACACAGTGTCTAGCAGTGCTAAAGATGATAAAGATGAAGAAAATAACATTCCACATAATGGAGCTGAAGCCACCTCTGTACCATTAATGACAACTGTAAAAGATAAAATGAGGAGATGTTCTTTGGGAATATTTTTGCCCAGATTGCCAAACAAAAGAAATTGTAGTGTCACTGGTATTGATGATCTGAAGCAGGTTCCAGCAGACACAACTGATTTAAATCACTTAGAAACTCAGCCGGTTTCCAATAAGGATTCAGGCATTGGAATTGTTAGAGCTAAACTGAACTTAAGTCCATCTCAATATATAAATGAGGAAAATCTCCCTATATATCCTGGTGAGATTAATTCCTCAGACTCTATCAGCATAGATACTGAGGAAAAGGCTTTGACTGAGACATACCAAAAAGAGACTTCACCCTCTGAAAATAAAATGGAAGAAACCTGCAATAGCCAAAAAAGAACCTGGGTACAAGATGATGATGATATTCAGAATGAGAAAAAAATCAGAAAAAATGAAATTGTGTTTAGTGATACTGCACAAGATCAGGAGATTTCTGATCTCCGTGCTGAAGGAGAGATGGATAAAAATGCTAACAGTGTATTGATAAAAAGCCTGAGCAGAACTCCGTCTAGTTGTAGCAGTTCTCTGGATTCAGTCAAGGTTGATGGGACCTCTCTGGACTTAAGCACACACCTTGGTAGTCAAATAGAATCACAGTTTCTCAGAGATACCGTTTGTGAAGAGAGCTTAAAGGAGAAACTCAAAGATGGAAGAATAACAATAAAGGAGTTCTTTATACTTCTTCAGGTACACATTCTGATACAGAAACCCAGACAGAGCAATCTTCCAGCCAAATTTGCTGTAAACACATCACCTACTCTGGAAGACCTGATGTTAAGTCAATATGTTTACCGACCCAAGATACAGATTTATAAAGAAGATTGTGAAGTTCTTTGCCGGAAGATTGAAGAATTAAAGCTTTCTGCACTAAACCAAGATAAACTGTTGACTGATATAAATAGGAACCTGTGGGAAAAAATGAAACACTGCTCTGATGAGGAGCTGAAGGCCTTTGGAATTTACTTGAACAAAATAAAATCACGTTTTACCAAGATGACTAAAGTCTTCACTCACCAAGGAAAAGTGGCTTTATACAGCAAGCTGGTGCAGTCAGCTCAGAGTGAGAGAGAGAAACTTCATAAAAGGATAAATGAGATGGACAACACACTTAAGAAGATTGATAACTATCTTACCGAGGTGGAAATAGAAACTAAGAGTTTGGAGGATGAACAGAAAGACAGTCCTGTGGAAGAACTGAATTCTGAAGTGAGAGCTGCAGAGAAAGAACTGGAACAGCTGAAAACTGAGGAAGAAAAGCTTCAAAGAAATTTCTTAGAGCTGGAGATACAGAAAGAGCAGATCCTTGCTCAATTAGACTTTGTGCAAAAACAAACAAAGAGAACTGAAGAGCTACTGGATCAGTTGAGCTTGTCTGAATGGGATGTCATTGAGTGGAGTGATGATCAAGCTGTATTCACCTTTCTTTATGACACAATAGAACTCATCATTACCTTTGGAGAGCCAGTAGTTGGTCTCCCTTTCCTGGGCAAGGCTTATAGGAAGATTGTTGATCTGAATTTTCAGTCTCTGTTAGATGAGGATAAAGCTCCTCCTTCCTCCCTTTTAGTTCATAACCTTATTTTCCAGTACATTGAGCAACAGGAATCCTGGAAGAAGACATGTACAACACAACATCAGGTACCCAAGATGCTTCAAGAAATCTCACTGGTAGTGAGCCATTGCAAACTCCTTGGAGAGGAGATTGAGTTTTTAAAGCGATGGGGACCAAATTATAACCTAATAAGCATAGATGTGAATAATACTGAATTGAAGCTTTTATTCTCCAGCTCAGCAGCATTTGCAAAGTTTGAGATAACTTTGTCTCTCTCAGCCCACTACCCATCAGTCCCATTACCTTTCTCTATTCAAAATCACCTTGGAAACATTGGCCAAGATGAAGTCACTGCCATTCTATCTAAAGTGCCACTGGAAGACAACTACCTAAAGAATGTAGTCAGACAAATTTACCGAGATCTGCTTCAGGACTGACTGCCATTTCTACCACTAGAATCATGGATTTCAGTTATAAAAATCAAACACAGTACACTTAATAATAATACTTCCAGCGTTTCAATTACTGTTTAATATTCATCTTTAGGTCATAGAAGCCTAGTAAAGTTTCTTCTGATGGAAATTTCTCCCACTAAAGTTATGCTCTCTGCTTTAGTACAAACCCTTTAAGAATTAACTTTTAAGTATAAGAGGAGGGGTCACCACAGACAAAAATATTAGCCATTTTCCCATATCTAGGGCTGTGATTTTTAGGTTTCTGCCTTCTGCCTACCAAATATTTCCAGGGTAGTCAGGTCTATCTACAAACCATTCATCCTCCTTTTTTCTCCATTCCAGAGATGTTATTAAGAGAAAGCAGTAGCACTCAGCTATTGGAGTGGTTGCCATCTTCTCTTAAACACCTTGTGTTCTTTTATATAGTGTCTACTAGTATTTTCCTAATAAATATAATTTTGTAGGGAAAAATTAATTTTTGGTCTGATACATATATGTAAATATATTAATACTGTTTTTGTGTTTGTGATATAGTAAAGAGATGTATATAGAAATACATAGAGATAAAACATCTTTCTGAAGGATGCTTTACAACAAGATTCTCAGTCTCTTTCATTTAATAATAGCTTCAAACAATATCACACCCAAAACACAGATTTGTCAAGTTTTGGTAATGGTAATGAACTTTTAAGTATTGTTTTCTGAAGCCAAACACTTTCTTATACACAAAAATAGGCATGTCCATTGATAACTGCATAATCAGTATTATCTGTAAGATAGACAAATGTGAAAAAACTTCATCTACTCTTTAGTCAAATCCTAATCATGATAATTTTTGTTTCCCTTATATATTTCTCAAATATATTTACATTTTTAAACTAATTTGTCTTAATATTTTGCTTTATATTTTGGGATCAGGTTAAAGTTCTATGGGTCCCATGAATGTTACCTGCCCTCTTGATTGGCTTTTACTCCTGAACTACTAGTCAAAATAGTAAATGGTCTTTTAAGCTTCAAAAGTCAACATAAAACTCATTTGCCATAAAAATCAATATTTAAATGCTCCCTGTTTCTGTAAACTCCTTGAAAAAATTTTAAGGTCATCAATATGATGTGTTTCCCTGAAACTGCCCATGAAATTTGTTTTCTTACTGGAGTTGTTTTCTTTCTTTCTGTAAACCTAAAAAAGTAGAAGTTTTGTTTTATGCATTTTGGCAACCTGGAATGACCAGTTCCAAGGATGATTTGGCTTGTAATGATAATCTCTGCTTTCTTGGGTTTGGAGAACATAATTGTATTATTTATCTAGTTATTTGCTTTTCTAGTTGTTCAAAGTATTGGCTATTTTTATAAAATTCTTTAGAAGTTTCTTCAGTAGTGATTGGAAATAGATTTTTTTGCACTATTAAAGTACGTTTATTATGTAAAATATGTTTAAAGTGGTATCTCTTTATGAAGTTTTTTTTTTTTTTTTACCCTGTATCCAGTATATCCTTGAAGATATGCCTAAGCAAGCTCACTTTAGGAATAATCACCTGTTTGAAAACTCAGATAAAATTAAAGTATGTCAGGACCTTAATAAA EMBV3_18381 ATGCAAATTCCAATCTGATGAGTTCCGTACAGAGAAGCCCATGGTACTGGGGAGCATGCC Gene BVT0102_094416 + 0 NULL GK000004.2:101795484-101862344 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17859 GCTCTCCTAGGATGTAGCTGGTATGTCAGATATGAGGATGATTGTAATCACTTGGCTTTA Gene BVV0102_006691 + 0 NULL GK000026.2:43155612-43257871 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151118 TCONS_00152448 TCONS_00151120 TCONS_00151116 TCONS_00151119 2 XLOC_092031 XLOC_092338 Coding TCONS_00151120 XLOC_092031 Coding Coding ACADSB 26:43167896-43186721 j TSS113040 4156 1 TCONS_00151120_2 371 0.109480269489894 11 0.779802379940501 0.00140292983380697 0.000644494541100451 0.000430517573813861 0.00161447550141159 0.00102063936862056 8.92150722843386e-05 0.000497225921196209 0.000433566885263197 0.00167673511771844 0.000468273399424592 3.64746509582359e-05 1.95984295494859e-07 7.54681488086174e-05 0.00125979547463421 0.000845261268437528 1.43770285746574e-33 1.47306192615894e-05 1.09339202817151e-63 0.00264302355723677 0.00301658822581909 0.000483723917381169 0.000520339638244503 1.57629125632231e-51 2.04563200405434e-64 0.0019614874927224 0.000192628867523082 0.0005048758325973 2.99767712631276e-08 4.25949807339734e-12 2.7152057118236e-20 XM_005225840.1 ACADSB PREDICTED: Bos taurus acyl-CoA dehydrogenase, short/branched chain (ACADSB), transcript variant X1, mRNA. 0.0 7281 100.00 0.971126082771896 NM_001609.3 ACADSB Homo sapiens acyl-CoA dehydrogenase, short/branched chain (ACADSB), 0.0 1485 81.85 0.362367661212705 TCONS_00151120_2 sp|Q5EAD4|ACDSB_BOVIN ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; 0.0 768 100.00 0.997304582210243 4 coding 1 1 1 0 -0.123556773755802 0.777648646003488 0.025078322811426 0.598693987425013 GAACAGCTCCTTCCTGGATAACCCAGCTTGGGTTTTTGGTCACAGGATGGTGAATCCTAACACGCCAGGCCAATCTCTCTTATTTTGCTGAAAGAAGTTACAAAGGGTGGGTTTGTAAAGCTACGAAGAAACTTCCCAAGCTGCCTGTCTTCCTGGAAAACTCCTCCTCATGCCCTAAATTCTTCTCAGTCAGAAGCTCAGCTCAAAGCGACAAGCAATGGACCACCTCTTGCCCCTCTGCAAACATTTACGGATGAGGAGATGATGATAAAGAGCGCAGTTAAAAAATTTGCCCAGGAACAAGTTGCTCCTTTTGTTTCAAAAATGGATGAAGATTCAAAAATGGAAAAATCCGTAATACAAGGATTATTTCAACAAGGGTTGATGGGTATTGAAATTGACACAAAATATGGAGGAACAGGAGCTTCATTTTTTTCCTCTGTCCTAGTGATAGAGGAGTTAGCCAAAGTTGATGCATCTGTGGCTCTGGTATGTGACATTCAGAACACATTAATTAACAGGATGATTGGAAAATATGGAACAGAAGAACAGAAGGCTACCTATTTGCCCAAGCTAGCTACAGAAAAGGCATCAAGTATCTGCATTTCAGAGACTGGAGCAGGTAGCGATTCATTTGCTATGAAGACCAGAGCTGATAAAAAGGGAGATTATTACATCATCAATGGGTCAAAGATGTGGATTAGCAGTGCTGAGATTGCTGGGCTGTTCGTGGTGATGGCAAATGCAGACTTTTCTGCTGGGTATAAAGGAATTACCTGCTTCTTGGTCGATGGTGATACCGAGGGCCTTCATGTAGGGAAACCAGAGAACAAATTGGGAATCAGAGCATCTTCCACCTGCCCAGTCACATTTGAAAATGTCAAGGTTCCAAAAACAAATATCCTGGGGCAAGTTGGGCACGGCTATAAGTATGCCATCGGGAGTCTTAATGAAGGCAGAATAGGAATCGCTGCACAGATGCTGGGAGTGGCTCAAGGCTGTTTTGACTACACTATTCCATATATTAAAGAAAGGAAACAATTTGGCCGAAGGGTATTTGATTTTCAGGGGCTCCAACACCAAGTGGCTCACATGGCCACCCAGCTGGAAGCTGCTCGACTCCTGACATACAATGCTGCGAGGCTCTTAGAGGCTGGGAGGCCGATGATTAAAGAAGCATCTATGGCCAAATACCATGCGTCAGAGCTGGCAGGCCTCATTACCAGCAAGTGTATCGAGTGGATGGGAGGAGTGGGCTACACCAAAAGTTACCCTGTGGAAAAATATTTCCGAGATGCGAAGATTGGCACAATTTATGAAGGAACTTCAAATATCCAGCTGAACACCATCGCAAAGTGCATCAGTGCGGAATACTGACAGGACAGCCAAAGAAGCGGGCCCCCTCCCTGGTGCCACTGGTGTTAAATTTTAAACTGTGTGCCTTGTTGGGGGCTGTGGACCTCCATCTCACTGAGTGATTTCATTTGGGCCCTTCATCTTGGATCTGAGACCCTTTCTGTCTTTTCTTTACAATCTGCTTAACTTAGGCACAGAAAATCATTTTTAAAATTTGGGAATAAGTGTACCATATTTTCTCCAAAACTATTTTTAAAGCTCTGTATGCATTATCATTCTAGCTACTGAATGTGTATGATCCCGGGTCCCCGTGACCCAACTAAAGAGCCCGTGTGCTTCAGCCAAAGATCCCACATGACAGAAAATCTGACACAGCCAGATAAATGAAAAAACATTTTAAAATAAATAAATAAAAGATGATCGGACTTAAAAAAAAAAAAGTCTCTACATTAGTTTTCAAGTATGAAGTTTAAATAATTTAATAATCAGAATATACTCAACATTGTAATATTCATTTTACCAACGATGCTGTTTACTTCTGTTTATATTGAATACTTAAGCTTCAATTTAAATTGAATACTGAGTAAAATTGTTTACTCAAGCTTAGTTATTGAGCTTTATCATGATAGGTAATTCAGAAATTATACTTTAGTTTGGTGATTCTCCAGAGGGGTTGTCTTACCCTCTTAATGAAGTGTATTAAAATCTTGTAAGGAAGGAGAAATACAAGAGAGCTGTAGGGGTCAAAAAGCAGATTGAGATATTATTAAAAAAGGACATATCTGGGAAGGCAAAAATCTGTTGTTTTACAGTCAAATTATAGAAAGGCAAAGCTCAACAAAATATCTAGCTGGCAATGCCAGTTCTTCAGTATCAGGGATTCTTGACCAGGAGAAGAGGATCTAAGTCCTCTGTCCCCTAGAGGGGAGGTGGACAGTGAAGGGCTGAGTGTGTTGTATTTCCTGAGACAGGGCAAGGATTAGAGGCGTTGGAGAATGTTTCACCGTTCATCCAGTTGTTTAAAGCAATCACTGCTGTCAAGTGGGAAGCACTTTAGTACTTTAATGAAAGGATGACGTTTATTAAGAAAACTTGACATTTTCAAAGTAATTTTGCTTTACACATTGATGTTCTTCAAATTTGTATAATGCATATCATGGTTAAGTATTCAGAATTGTGTAAGTACAGTGGAGATAGGAGTTACGTTAGAATATTAGAAAGACATATGGACAAATTTAGACTTCTGATCAAAAGAGATTAAGTCTACTTAACTTTCAGATAGGGAGCTGACAGAAACTAATCATGCAGTCTTTCAGAACAAAAGGACAGTGCTCTGATAAAGAAAGTAGGGATGGATGAATTGTCCTAAAGCGGGGCAGGGACATCTTTGATTTCTGTGGTTATTTGAGTGAGGTGGGCTTTTCAGATGACAGAGTAGAAACCAACATCAGTAATACTAACTTCCTCCCCTGGAGTTATAAACATGTGAAGCTACAATAAACCTTGTTCAGATTAGCAGTACGAGAGAGGCTTCTGTGTATACCTGAACCTTGAATTTATATTTCATATTGATACAGTTCTAATTGTGTGTATGTTTTTGTACATGTTCTCAAATAACAGTTGAAAATCATGTATTATAGTTAATATCTGTCCCTACCTTCTTCCATTAGTGAATTTTGTTATTGTACCATTTACCAAAGAGGATGTGGTAGGTTTTCCTCATAGTTCTTCCATTATAGCTTTTCTTAATAACCATGACTTTGAGGGTTTTGAGTTTGTGTCCAGTGGAAGGACAGGCTTGTTTACCTCCTGAAACCTGTCATTACTCTTTGTTAATTTGAGGATAGGGCCATTACGGGGCCCAGAAGGAAAAGCCCTGAACACAAGCACCAAGTCATATTTATGTGGGCAGAGCTGGACTCACCCCAACTGCCACGTTAGTATTGTCAGGAATTTCACTTTACAACACAAAAATGAATCGGTGTCAAAGATTTTAGAATTATGGAAAGCTCCCAATTCCTGGTGTCTCGGTAAAGAATCTGCCTGCAATACAGGAGACCAGAGTTCAGTCCCTGGGTGGGGAAGATCCCCTGTAGAAGGGAGTGGCTACCCACGCCAATACTCTTGCCTGGAGAGTTCCATGTACAGAAGCGGGCTACAGTTCATGGTGTCACAAAAAGTCAGACACAACTAAGTGACTAACACTTTCACTTTCAAATCTTAGAAAGACTTTAGAGACCCATCCAGCCAACTCTCTTCATTTTAAAAGTGAAGGATTCATATAGCCCAAAATACTTACCCGAGATCATCCGTCCAGGGCCAAAGATAAAACAGAGATCCAAATGTACTGGCTCCCAATTCTGTGCTCTTCCTACTGTTTACCACTGTCTCTGTTCAACACATTCTGGATTTCATCCTTGCTATATTTCAGTCCTCTTATTGGTTTATTTTAGGTTTAACTGATAAAAGAATAACATGTCAGAAGTGTTAAGACTGATGGGTGTCATTACTTACATTTATAAATCACCTGACGAATATACCAGCTCTCCTAGGATGTAGCTGGTATGTCAGATATGAGGATGATTGTAATCACTTGGCTTTATGATTATGGTATGTTTTAGAAAATGCACTAATCCTTGCTGATGTATTTTTGCTTATCTCAGAAAGTGAAACTTTTGTTGTAATGGTACACATCAGACTGTAATCAGTGTTACAAAATCAATATTCTATGGAGAATGAAAAAATAAAGCACTACCTGGAGGCTTTTGCTACTTTAATAAAGCAAAATTGTTTGTTATGC EMBV3_35340 CACTCTCTGCATCTGCGTCTCCATTTCTGTCCTGCAGATAGAGTCAGTCGCCAAAGCCTT Gene GeneID:536110|DCLK2:XM_002694327:73_cdna Constitutive 0 NULL GeneID:536110 17 GENE DCLK2 NULL doublecortin-like kinase 2 EMBV3_16552 CAGTGTCGCCTGTGTTCCTCCACCCAACAGGTCCCCAAAGCATTTGTGAACCTAGTCGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28973 CGCAGCTATAAAGGTGAGCTTTTTGACAAGACACCAGTGCTGCTCACGGATTACCCCGTT Gene GeneID:528987|LOC528987:XM_002689801:94_cdna Constitutive 0 NULL GeneID:528987 8 GENE LOC528987 NULL similar to CG11909 CG11909-PA EMBV3_09008 TGTCCGCAATCGCATGTTAGTTGGCCCATTTAGGGGGATCTGGACTTGCAGCCTCTTTTG Gene BVT0102_086538 - 0 NULL GK000001.2:95799186-95888013 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004608 TCONS_00004614 TCONS_00004613 TCONS_00004610 TCONS_00004605 TCONS_00004609 TCONS_00004611 TCONS_00004604 TCONS_00004607 TCONS_00004606 TCONS_00004612 1 XLOC_001071 Coding TCONS_00004609 XLOC_001071 Coding Coding FNDC3B 1:95886842-96232477 j TSS2291 8306 1 TCONS_00004609_8 1207 0.0347941247291115 26 0.976044023446767 0.00225551032559824 0.00198430759662226 0.00135665486196615 0.00210230500370747 0.00124519240238453 0.000880436055987872 0.000694923150474214 0.000944209538140834 0.00157754167323142 0.000189493943069049 4.5587301707291e-29 4.10861526725011e-05 0.000180790815889377 0.000291557558008344 0.000367228302342167 1.17027388812026e-20 4.41524947706187e-07 3.38376229985509e-22 0.00098611448760713 0.000969502275545384 0.000175042709245543 4.28613942993081e-43 3.50988196411747e-18 2.91294514329699e-51 0.000874276686782486 0.000640362329104045 0.000547099809693181 3.2543102942205e-30 8.83986286082779e-05 3.16242255255503e-25 XM_005201697.1 FNDC3B PREDICTED: Bos taurus fibronectin type III domain containing 3B (FNDC3B), transcript variant X2, mRNA. 0.0 1.235e+04 100.00 0.824223452925596 NM_022763.3 FNDC3B Homo sapiens fibronectin type III domain containing 3B (FNDC3B), 0.0 9638 91.07 0.825066217192391 TCONS_00004609_8 sp|Q53EP0|FND3B_HUMAN FND3B_HUMAN Fibronectin type III domain-containing protein 3B; 0.0 2349 96.19 0.99917149958575 3 coding 0 0 1 1 -0.145147926587934 0.429380866297619 -0.0243464502482738 0.607969796095863 TAACCCTTTCTGTCCTTTTAAGGCTAATAGTTTGTGGTGTTTGGGTTGCACTGAAGGCAGCCACAGGGGTGGGATGAGCCCAGAACAGACTAGAACGTGTCTCGTCTCTGCAAACGCCAAGAGCAGCTCCCGTGGTGCATAAAAGGTGATCTCAGGATTCAGAGAGGCCCTCTGCTTTCCCAGACAGCCCAGGCTAAACCTGGGGAGCTGGCAGCCCTAAATGCTTCCTTTGTTAGAAATTATTGCGCTCCCTACTCCATCTTTAGAAAGTGAGTTCACCAAAGGAAGCCAGTTGAGGGAAATTCTCCATGAATGTACGTCACAATGATGATGACCGACCAGATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTTGCCATGATGCCTCACTTGGTGAATGGAGATGCGGCTCAGCAGGTTATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACAATAAGAGCGGAGGATGGAACACTGCAGTGCATTCAAGGACCTGCTGAAGTTCCCATGATGTCACCCAATGGATCCATTCCTCCCATCCATGTGCCTCCAGGTTATATTTCACAGGTGATTGAAGACAATACTGGAGTCCGCCGGGTGGTGGTCACACCCCAATCTCCTGAGTGTTACCCTCCAAGCTACCCCTCGGCCATGTCTCCAACCCATCATCTACCCCCCTACCTGACTCACCACCCGCATTTCATCCATAACTCACACACAGCATACTACCCACCTGTTACTGGACCTGGAGATATGCCACCTCAGTTCTTCCCTCAGCATCATCTTCCTCCCACAATATACAGCGAGCAAGAAATTATACCACTCTATGGAATGTCGAGTTACATCACCCGAGAAGACCAGTATAGCAAACCTCCGCACAAAAAGCTGAAAGACCGCCAGATTGACCGCCAGAATCGCCTCAACAGCCCTCCTTCTTCAATCTACAAGAGTAACTGCACCACCGTGTACAATGGCTATGGCAAGGGCCACAGCGGTGGCGGTGGTGGAGGCGGGGGAGGTGGCAGCGGCGGTGGGCCGGGCATTAAGAAAACAGAGCGGCGAGCAAGAAGCAGTCCAAAGTCAAATGATGCAGACTTGCAAGAGTATGAGCTGGAAGTAAAGAGGGTGCAAGACATTCTTTCGGGAATAGAGAAGCCACAGGTTTCTAATATTCAGGCAAGAACAGTTGTGTTGTCCTGGACGCCCCCTGTTGGACTTTCGTGTGGACCCCACAGTGGTCTTTCCTTTCCCTACAGTTATGAGGTGGCTTTGTCAGACAAAGGACGAGATGGAAAATACAAGATAATTTACAGTGGAGAAGAATTAGAATGTAACCTGAAAGATCTTAGGCCAGCAACCGATTATCATGTGAGGGTATACGCTATGTACAATTCCGTAAAGGGTTCCTGCTCTGAGCCGGTTAGCTTCACCACCCACAGCTGTGCGCCTGAGTGTCCCTTCCCACCTAAGCTGGCACACAGGAGCAAAAGTTCACTAACCTTGCAGTGGAAGGCACCAATTGACAATGGTTCAAAAATCACCAACTACCTTTTAGAGTGGGATGAGGGAAAAAGAAACAGTGGTTTCAGACAATGCTTCTTTGGGAGCCAGAAGCACTGCAAATTGACAAAGCTGTGTCCAGCCATGGGGTACACGTTCCGGCTGGCGGCTCGGAATGACATTGGCACCAGCGGGTATAGCCAAGAGGTGGTGTGCTACACGTTAGGAAACATTCCTCAGATGCCCTCGGCACCAAGACTCGTTCGAGCTGGGGTTACGTGGGTCACACTGCAGTGGAGTAAACCAGAAGGCTGCTCACCTGAGGAGGTGGTCACCTACACCTTGGAAATCCAGGAGGATGAGAACGATAACCTTTTCCACCCAAAATACACTGGAGAGGATTTAACCTGTACTGTGAAAAATCTCAAAAGAAGCACACAGTATAAATTCAGGCTGACTGCTTCTAATATGGAAGGGAAAAGCTGCCCAAGTGAAGTTTTGGTTTGTACAACAAGTCCGGACAGGCCTGGACCACCTACAAGACCCCTCATTAAAGGACCAGTTATGTCTCATGGCTTTAGTGTCAAATGGGATCCTCCAAAGGACAATGGCGGTTCAGAAATACTCAAGTACTTGCTGGAGATTACGGATGGAAATTCTGAAGCGAGTCAGTGGGAAGTGGCCTACAGTGGGTCGGCTACAGAGTACACTTTCACCCACTTGAAACCAGGCACTTTGTACAAACTCCGAGCATGCTGCATAAGTACTGGTGGACACAGTCAGTGTTCTGAAAGTCTCCCTGTTCGCACACTAAGCATTGCACCAGGTCAGTGTCGCCCACCGAGGGTTTTGGGTAGACCAAAGCACAAAGAAGTCCACTTAGAGTGGGACGTTCCTGCCTCTGAAAGTGGCTGTGAGGTCTCAGAGTATAGCGTGGAGATGACAGAACCGGAGGATGTAGCTTCGGAGGTATACCATGGGCCGGAGCTTGAGTGCACCGTGGGCAACCTGCTTCCAGGAACCGTGTATCGCTTCAGGGTGCGGGCTCTGAATGACGGAGGGTATGGTCCCTATTCTGATGTCTCAGAAATTACCACTGCTGCAGGGCCTCCTGGACAGTGCAAAGCACCTTGTATCTCTTTTACGCCTGATGGATGTGTCCTAGTGAGCTGGGAGAGTCCTGAAAGCTCTGGTGCCGACATCTCAGAGTACAGGTTGGAGTGGGGAGAAGATGAAGAATCCTTAGAACTCGTTTATCATGGGACAGACACCGGCTTCGAAATGAGGGACCTGTTACCTGCTGCACAGTATTGCTGCCGATTACAGGCTGTTAATCAAGCTGGAGCAGGACCGTCCAGTGAGCTTGTCCTTTGCCAGACACCAGCATCTGCCCCTGACCCTGTCTCCACTCTGTGTGTCCTGGAGGAGGAGACCCTCACTGCCTATCCCGATTCGCCTTCTGTGTGCCTTGTACTGAACTGGGAAGAGCCGTGCAATAATGGATCTGAAATCCTTGCCTACAACATAGATCTTGGAGATACTAGCGTCACGGTGGGCAATACCACCACCCACGTTATGAAAGACCTCCTTCCGGAAACCACCTACCGGATCAGAATTCAGGCCATAAATGAAATTGGAGCTGGACCATTTAGTCAGTTCATTAAAGCAAAAACTCGGCCGTTACCACCCTTGCCTCCTAGGCTCGAATGTGCTGCTGCGGGGCCTCAGAGCCTGAAGCTGAAATGGGGAGACAGTAACGCCAAGATGCACGCTGCTGATGACATGGTGTACACGCTGCAGCTGGAGGACAGAAACAAGAGGTTTATTTCAATCTACAGAGGACCCAGCCACACCTATAAGGTCCAGAGGCTGACGGAATTCACATGCTACTCCTTCAGAATCCAGGCAGCCAGCGAGGCTGGGGAAGGGCCCTTCTCAGAAACCTACACCTTCAGCACAACCAAGAGTGTCCCCCCCGCCATCAAAGCACCTCGAGTAACACAGTTAGAAGGAAATGCGTGTGAAATTTTATGGGAGACGGTACCACCCATGAAAGGCGACCCTGTCAACTACATCCTGCAGGTGTTGGTTGGAAGAGAATCTGAGTACAAACAGGTGTACAAGGGAGAAGAAGCCACATTCCAAATCTCAGGCCTCCAGACCAACACAGACTATCGGTTCCGCGTGTGTGCATGTCGTCGCTGTTTAGACACCTCTCAGGAGCTAAGCGGAGCTTTCAGTCCCTCTGCGGCTTTTGTACTACAACGAAGTGAGGTCATGCTTACAGGGGACATGGGGAGCTTAGATGATCCCAAAATGAAGAGCATGATGCCTACTGATGAACAGTTTGCAGCCCTCATTGTGGTTGGCTTTGCAACTTTATCCATTTTATTTGCCTTTATATTACAGTACTTCTTAATGAAGTAAACAAACCCAACAAAACTAGAGGTATGAATTTAATTAATGCTACTCATTTTAATATACACATTTATTCAGATACTCCCTTTTTTAAGCCCTTTTGTTCTTTGATTTATATACTTATTTTACAGATTTAGCTAGGAAAAAAATATCAGTGTTTTGGTGCACCTTTTTGAAATGCAAAACTAGGAAGAGGTTAAACTGGATTAAAAAAAAAAAAAAAAAGCAAACCAGATACCAAAAGCTAGCTTATGTTTTCTTTTAAAATTTTCAGATTTGCCTTTATTCTGTCTTCACTGATGTCTTTTGCAAGCCTTTGATTTTTTTTTCCCATGTTACAGTTTAGTAATTTATATTCACCGTTCACTTCTTATGTCTTGATCATCTGTATCTGTGACCATGAATCACAGCGTGTGTACTTACAGGGCTAGGATTTCGGCATTGTCAGAGTATTACCACACAAAAACCACCACGTAACGGAAGATATGTTCACTCAGATAAGGCTGCCCTAAACAACCATGTTGTCACTCAGTTATTTAACTGTTTAGCTCATCGAAATCAAAATGTGTACTTTAATCTAAAATGTTTTAATAATCTGTATTTCTTATGATTTTAACACTATGAGCTGCCTGTCTAAGAAATCAAGTAACCAAAATGCACCTATAAATTATGGAGCATTGTAGATTTTACCACGTCAATTCATAGCAGTAACTTTTCGAGGGCATTGTGCAATAGTTAGTTGTTTCCTTGTTCAGCTATTTTAAAAGCTGCTTTAACTTGTTTGTCTTTGTATATAACTACTTCTAATCTAATCACTAGAGTTATTATATTCTGTTATGTTTGACCAGAATTATATGACGAGAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGTGAGCAGTCTCCTTATATGTCAGCTCATTATTTTTGAAAGATTTGCCTTTAGGCTGTTCTTTGAGGTATCAATGAAGTGATTGAATTTCAGTTCCTTAATTCAGTGCACATAATACTAATCTAACAGCAAATGAAAATTAAAACCCAATAAATTTGTAGTTCCTATTTTTGGGGGTTGACCTGGCTATGTGTGGAGAGGGAATGGTATTTGCTGGTAATAAGCACAGGGTGTTTGGGGGTCAAGGAGCCTAGATTCTCTCCCTGGATCTGTCACTAACTTGCTGCGTGACCTGAACACGTCACTTTACCTCTCTGTGCCTCAGTTTTCCCATGCATTAAAAATAAAAAATAAAATGGGGATTCTAATGTTTGTAAGTGCTTTGAGATCCTTGATCAACAGGTGCTATTGGAGTGCAAAGTGTTACTCTTGCATGTTTATTTTCATTCATGAGATTGTCAATTTTAACCCAAAGTCATTGGATTATGTATATGAAGTCCATAATGTTTGCGTACCTCAGGGACATTTAAGAGTTGGAGGTGCAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTTTTGTATATTTTTGCTACTTGGTTTTTCTTGATCATAGCTATTTTGTGCTTGGTCTATGTTGTCTTAAAATGCAGTATCCTGTACTAGCTTATAATATTCCCATACCAAAGTCATGGGGAAACCAACATTATTTTGTTTTTGGTTTATTTATACTATATTCTGCATACAGTACTTTAAATGCCAATTACAGTGCAATCTTTATTTATTGTAAAATTTTTTAAATGTACTTATGTACTAATTTTCCCTTGTAGCATGTTATTTTTTTGTGTTTTATACTTTTGTAATTTTAGGTCAGTCTTGTTCCTTGGCAACATCTGTAGTATTATCATTCTTCTGACATTTTCTTGTGTTTTTAAAGATAAAGAGCATCTAGTGCATTAAATGCCAAAAAAAAAAAAAAATCCATTATCAGTGATTGAAACGTTTACATGTACCCAAGAAAAACATAATCATCTCTTTAAAGAAAGTGCTAAGATCAATGAATTATTCTGTGTGCCTACATTGTGATGTAGTAAGTACTAGAAAGTTCTGTATTTTGTTATTGACTAGAATAACTAGTTTAATTAGCCTTGCAAACTGATGGCATCAAGGTAAATATATTTTTGCCAAAGTTTCTGGCCTTCCAAAACTCACTCCACTATTAAATGTGCATCACGATCCACTATAACAACTGCATCTGCATTTTCTGAAACAATCTCATGCCTTTGGGGAGAAGGCTTTTTTTTTTTTTAAACAATGAAGAGTCAACTGAGTACAAGAACCTTGTCTGCAGGAGAAAAATAAAATCCCTTTTTGGAAACACTTCAGAACTGCTGCTATAAAGAAATTCTCAGAATTGGTTGGAATTTTTTTTTTATGAAATAGTACTTTAAGCCAAAATTGCTATGACTATTTGATCTTTGAGATTTTCATACTGTCTAACCCCCAGAAAGCTGAAGTGTGTGAAACACTAGCTGACGGCACTTTATTTTATTGCTCTCCATTGTTGACTGTTCATTATAATTCCTCAGTCAAAAAGTTATCACACTATCCGGCACTATTTTATATTACAAATATTATGTATATGTGATATTGATATAGAACTATATATTGCCATTACACATGACCAATAAAATAAAGTGTTATGTTAACCTTCTCTCTTTGCCCTTTTGCAATATGTAGGAACGAGTGAGTGGCTTTCTGATGCTCTATATGTCAAACATCCTCTCTGGCACAAGAAATTCCAGTCATGTGAAGCAAAATTCCCTTTGTCCTCAAAGAAATTGTTTAAAAGGAAAACTTTTTTAAAAGGTTTTTTTGCATATTATCTGCCTTGTTCTTATCAACTTGAAATGTTGGCATTTTCTAACCATGTTTTGTTGGCTACAGTAATTCAGTATTCCTGTCAAATTTGAAAAGTGCCCTAATTGAATGTGTTTGAATGTTATCCTTGCACAATTCTTTAAATTGAAAGACAAAATGTTTTACCTCACTGTTGGACATACATTCCAAGCTTTTCAACTTTAGGAGAAAAAAAAAATAATCATGTTTTCCTGTATTGTAAATTTTAGACTATTTCATATACATTGTATTAAAACTGCCATATCAATTTTAATGTATAGATTTTGCAAATACTATGCTATATGTAATACCTAACTGTATCTGTAGTGTATATGTAATATATTTATGCCCAATAAATGTTTTAATTCTTTCTGACTTAAGTAGGGTTCTTCTGCCATGAATAGGATTGCTTTTGTTGTTGTTGTTACTTTTTAAATACTTAAGCCACACCCCAGAAGTTGTAAATTCAGATGCCTTTAGAGGCCAGGCAGGTGGCGTAGTGCAGGGAGCTTGCTTTGCCATCTAAAGGGGTGGCTGCCACCCTGCTCCTGGTTGGGGTCCTGCAGGTCGGCCACCCACAAACATGTAGGCTATTTTTTTCAAAAGAGGCTGCAAGTCCAGATCTCCCTAAATGGGCCAACTAACATGCGATTGCGGACAAGGCCCACGGGCAGCCAGTTCTTTTTCAGAGTGTGTGTAGATAAAGTACGCTTATTCTAACGTGTTATCCATCTGCCAAACTCAGGAGCCCAGGTCTGCCTCTTCACTTAGCACCTGGGATGCTCCTGCTCTGTGACAGACTCGCACAGTTCTGACCTCCCCCTTCCCTCCTCCAGGTCCCGTTCAGCAACAACAGCAGCAATAAAGTATAGTGTTCCTACTATAGTCATGGTTGCATCATGATGTTTAGATTGTTTTGCTAGGAATCCCTACTATCTTTTTTCCCCCTGAGGGAAAAATGATTGGGGAAACTTTATAACTCAAAGCTCTCTTTCTCAAAGAATGCTGATAATCATTCTTTTGGGTAAAAATGCCAAGTTGAACACATCAAGTTTTGCATGCTCCTTACACTTCACTCCTGAAAATATACTAAAGGGTTTTTTTTAAGTCATAACTGCTGTCAACACTGAAGAGTGGGAAAGAATTGTTAACACGAGAATTTTGAAAACCCAACCAAAGAAAGCTGAATTCTCATTTACCAGGGAAGAGAATGAACGCCAACTCAATTTACGTGCCGAATTCACTGAAGGTTCAAAACCTGATAGACATATTTCCCTTTAAGGTAATGGTAAAGAGGGATGGGAGCCTAAAATAGTATTGGTAAAAAGCTGTTAAAAATGCCATTATAAAAAATAATGTCTTTTTCCAGCAAAACAGCTGCTCCTCCATTCTTGCAGAAACCAAGTTTATCCCCAAGAGAATGTAAAATAAGCCCTGGACTTGGAGAATGTTATTCTTACCTGAAGATGAAGTGGTTCAGTACCACCCTTCAGTGGTACTTCTCAGCCTTGGCTACACAGTAATACCACCTGGGCAGCTTTTCAAAATCCC EMBV3_03836 ATGCTGCTCTCCAATCTGTTCTGGGTGTTCCTGGCCTCCACCTTCTCTGGATCTGGTGTA Gene GeneID:100336256|LOC100336256:XM_002690559:186_cdna Constitutive 0 NULL GeneID:100336256 10 GENE LOC100336256 NULL TRD@ protein-like EMBV3_06097 ACCCCATCTGAGAGAAGTACAGTCTACAGCATGAAGAGAGGGACCAGAGCCCCACTTTGT Gene GeneID:540019|MGC159903:NM_001099103:248_cdna Constitutive 0 NULL GeneID:540019 2 GENE MGC159903 NULL hypothetical LOC540019 EMBV3_41658 GTCAGTAAAGTCTCTTGTTCTTTACCGGTCGTGGCACTCTGGTCAGTTGTCCTCATCAGG Gene BVV0102_051447 + 0 NULL GK000016.2:7054213-7942670 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10584 TCAAGAGAGAAAACAAGAACAGGAGGACAACCTAGCCGAGATCTCCAACATGCTGCGTGG Gene GeneID:540723|RIBC2:NM_001038191:12_cdna Constitutive 0 NULL GeneID:540723 5 GENE RIBC2 MGC133859 RIB43A domain with coiled-coils 2 EMBV3_16367 CCGGTCTAATTGTAGAACCGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCC Gene BVT0101_040837 + 0 NULL GK000002.2:6353450-6395003 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117923 TCONS_00220566 TCONS_00118040 TCONS_00210913 TCONS_00226167 TCONS_00219592 TCONS_00040258 TCONS_00250203 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00174808 TCONS_00174809 TCONS_00132066 TCONS_00232829 TCONS_00174807 TCONS_00022895 TCONS_00030963 TCONS_00198905 TCONS_00207934 TCONS_00174805 TCONS_00050405 TCONS_00171428 TCONS_00175564 TCONS_00207933 TCONS_00205125 TCONS_00174806 TCONS_00118487 TCONS_00056149 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00242415 TCONS_00031759 TCONS_00001866 TCONS_00110426 TCONS_00246741 TCONS_00001865 32 XLOC_072089 XLOC_133883 XLOC_072206 XLOC_129423 XLOC_137940 XLOC_132911 XLOC_024074 XLOC_153146 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_013565 XLOC_017212 XLOC_120558 XLOC_126448 XLOC_030532 XLOC_103815 XLOC_105345 XLOC_124587 XLOC_072644 XLOC_033952 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_149079 XLOC_018004 XLOC_066330 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_33679 TGCAGCACCTTCAGGATCCACCTTGTTTGGAGCAACATGGAGCAAAGTTACCCTTCCAGT Gene BVT0102_126348 + 1 EMBV3_10864 GK000018.2:50369399-50440500 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16578 AGACTGGAAGGCAAGTTTTTTGAAGAAAAGGAGATCAATGATCTATTGGTTAAAGAAAAG Variant GeneID:100137993|LOC100137993:XM_002691005:322_cdna 595^810 1 EMBV3_38909 GeneID:100137993 10 GENE LOC100137993 NULL similar to Uncharacterized protein C14orf45 EMBV3_31299 CCCATCCATGTCATTTAAACAGCATGCTGCTTTGCCAAGTTGCTGTCACTATTCCAGGTG Gene GeneID:286799|FIGF:NM_001101043:5_cdna Constitutive 0 NULL GeneID:286799 X GENE FIGF VEGF-D c-fos induced growth factor (vascular endothelial growth factor D) EMBV3_24801 ACAGAGCAGTGTCTACCTGTCTACCACAAATGGAAGTGTGGATGGATAGTGGGTGCATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00368 TGGGTTGCCACTTCTTCCTCCAGGGGATCTTCTTGACCTAAGGATTGAAGCTGAGTCTCT Gene BVV0102_409906 + 0 NULL GK000019.2:2628692-3185571 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22466 CGGAGGCCGACGGGAGGCTGCGGCCGAAGAGTCACCAATCTGCAAGCACATCTGAAGTTG Variant GeneID:615986|CCL25:NM_001046569:99_cdna 85^152 2 EMBV3_09585 GeneID:615986 7 GENE CCL25 MGC140392 chemokine (C-C motif) ligand 25 EMBV3_27412 CCTGCATCTCCTGCATTGCAGGTGGATTCTTCAGCTCTGAGACACCAAGGAAGACTGAAT Gene BVT0102_046732 + 0 NULL GK000012.2:9340479-9843842 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02160 TTTTGTTTTAGTTGTTGTGCTAAACTCAGTAATGCTGTTCTAACTACAATGCTCAATAAA Gene GeneID:539619|LRCH4:NM_001080738:59_cdna Constitutive 1 NULL GeneID:539619 22 GENE LRCH4 LRCH4 NLRR-1 leucine-rich repeats and calponin homology (CH) domain containing 4 EMBV3_04876 CAAGGGAAGACAGGTGGCAGCAGAACACTCAAGAGACACCCTGGAACCTGAGAAGTCAAA Gene GeneID:784939|GCET2:XM_002684746:205_cdna Constitutive 0 NULL GeneID:784939 1 GENE GCET2 NULL germinal center expressed transcript 2 EMBV3_16014 GTATAATTGGCACTAGAATCGGGATGTCTTCTGATTACCGATACAGTGGGTTCTTGTGGC Gene GeneID:541051|TBC1D30:XM_002687545:540_cdna Constitutive 2 NULL GeneID:541051 5 GENE TBC1D30 NULL TBC1 domain family, member 30 EMBV3_34346 CGCCGCAGGCCCGAGCCCCACCTCCAAAGGGCCACCTGGCCCAGGGCCAGACATGACCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08542 CTTTACTTACGGCGGATGCAGAAGGAAGCCGAACAACTTCCGGAGTGAGAAGGAGTGTAT Gene GeneID:616039|LOC616039:XM_002692340:144_cdna Constitutive 2 NULL GeneID:616039 13 GENE LOC616039 NULL similar to Pancreatic trypsin inhibitor precursor (Basic protease inhibitor) (BPI) (BPTI) (Aprotinin) EMBV3_40313 CTCTCAGACTGGAAATCATCATCCTGACCCAAGAGACCCAGAAGCAAATTCTCGTCACGG Gene GeneID:100300864|LOC100300864:XM_002685546:148_cdna Constitutive 0 NULL GeneID:100300864 2 GENE LOC100300864 NULL hypothetical protein LOC100300864 EMBV3_12999 GAGCTGAGAGCGAGGCCGCGGAGGACCCAGAGCCCTGCCTGGCCCCCAGCCCGGAGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18906 AGTATTCAAACTGCAGATGGGGCTCCAACCACGTCCTGTCTTGGCGCTGAGGAAACTTTT Gene GeneID:786636|LOC786636:XM_002690565:215_cdna Constitutive 0 NULL GeneID:786636 10 GENE LOC786636 NULL similar to LOC785621 protein EMBV3_23646 CTGGTGGTAAATAACTGGAAAGAGAAGTGGCAGAACCTTGTTTTCATCAGGAGGGTCAAA Gene GeneID:507579|TTRAP:NM_001105341:59_cdna UTR3_Alt 2 NULL GeneID:507579 23 GENE TTRAP NULL TRAF and TNF receptor associated protein EMBV3_40699 AAATAGCGTTCGCCTTGATACCCCTCTCCTCGTGTGGGGGCCAGATAGGACCCTACTCTT Gene GeneID:515848|ACBD4:NM_001046214:251_cdna Constitutive 2 NULL GeneID:515848 19 GENE ACBD4 MGC137561 acyl-Coenzyme A binding domain containing 4 EMBV3_25720 GTTCTGCCTTAGTGTTGGAGCCATTGAAAGATGGAAGATGTTTTGAAAGCCTTGCAAACA Variant GeneID:510809|MIS18A:NM_001098010:28_cdna 549^645 2 EMBV3_19005 GeneID:510809 1 GENE MIS18A NULL Protein Mis18-alpha EMBV3_08818 GTGAGATGTCCCACCATGATGTTCTGGATGCTGCTTCCCAAGGAATAAGTGTCATCCTCT Gene GeneID:509473|NIF3L1:NM_001080249:85_cdna Constitutive 0 NULL GeneID:509473 2 GENE NIF3L1 MGC139495 NIF3 NGG1 interacting factor 3-like 1 (S. pombe) EMBV3_12941 CCAGTGAGACTGTCGAGGGCCTTGAGTTTTTCAGAGGAAGGGAGGCAGTTTGGAATCAAA Gene BVV0101_032920 + 0 NULL GK000010.2:43065720-43089369 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020827 1 XLOC_011502 NonCoding TCONS_00020827 XLOC_011502 NonCoding NonCoding - 10:43067803-43068686 - TSS14717 883 2 TCONS_00020827_2 51 0.0894677236693092 1 0 0 0 0 0 6.70963849362093e-05 0 0 0 0 7.45548345785056e-05 0.000194438079162871 2.42968386890864e-05 0.000399683527191489 0.000426182926674738 0.000566741227451959 0.00080760122981191 0 0.000227324345765177 0 0 6.87594619479386e-06 0.0004790241697721 0.00301298449090482 0.000626536646835664 0 0 0 0.000293702887373816 4.94806953649944e-05 4.08533458189016e-05 0 noncoding 0 0 0 0 -0.0342800100215548 0.77510952840765 0.0541719550185384 0.313518501125969 GTGAAATTATAAAACAGTGCCCATTTATTAGTGCTAAGTGCCAAGTGCTTTACATACATCGTGACACTAAAGCTCACAATAAACTTCTGAGGTAGCTATTAAGTTTTCAGACACCCATAGAGGCCACAGTGAAGCCCAAAGAGAGAGCCTAGATTCTTCCCTGTAAAACAGGAACCTGAGCCAGGTGACCGAGGCCTTCCAAGTGCTTGACCATTGTATACATCTAGATTATTGCATTCCCAAACCTTCACAGTCAGCCATGGTCCTGGGATTGGGCAATTCCTGTGGGACGCTTCCTGACGTCCGAAGTGTGGAATGGCACTGTGTCCTTGGGATTCTACTTTTCGAATCTGTTTTGGGTGGGCTGGTTTTATGAAGCAGTGCAACAAGAGTTCTCTTCAGGCTCTTGAGAGCCTCGAAGGCAGACAGACATTCTGTACTTTTGATTCCAAACTGCCTCCCTTCCTCTGAAAAACTCAAGGCCCTCGACAGTCTCACTGGGGAGAGAGACTCAGCTCCCTCCTGTGGCTTTTCAGTTTGCGTCAGGCCGCTGGGCAAGGCTGCAGTGATGTGACCTCACTTTCGGTGTCTGGTTTCAAAGCCCGTATTTAAGTCCCCGATTCTACTGCAGCTGCACATTTTCTGAGCCTTTATCTTTTATCCCTGCCTTCAGAACTTCAGTCTATGCGGCCAAGCTCCCTCTCTCTCTCTCACACACATTCTCATTCATTCTCAATCTCTTTGAAAATATTTCACAGTGGAAAATTAACACATTGGAATTAACACGGTTCCCTGTGACAAGAAAGCACACAGAAGTGAGAACCAGCGTCCTTATAACCGCAGTGGTAAGGAATGTCTTTGGAACCATTCTCTTCTTCACAGG TCONS_00017000 TCONS_00017001 TCONS_00017002 TCONS_00017003 . 3' 19879 TCONS_00017000 TCONS_00017001 TCONS_00017002 TCONS_00017003 . 3' 20761 EMBV3_36072 AGGGCAGGAGAAGAAAAGAGGAGTTGGTGAAGGTGTTACCTCATTTGGAAAGCCTTGAGA Variant GeneID:531706|USP33:NM_001101139:56_cdna 142^199 1 EMBV3_02813 GeneID:531706 3 GENE USP33 NULL ubiquitin specific peptidase 33 EMBV3_36165 TTGGTCAAGCTACAGGCAAAGCTTCCAAAGCCACCTACTGTGCCCAAGTCAGAGCCCAAA Gene GeneID:505456|STAP2:NM_001034246:182_cdna Constitutive 3 NULL GeneID:505456 7 GENE STAP2 MGC127502 signal transducing adaptor family member 2 EMBV3_40941 TAGCTATGGCGGCAGCTGTCACATGGGGGAAGAGGTTCTGAAAAGTTCACCTACCTGGAG Gene BVV0101_062788 - 1 EMBV3_03116 GK000017.2:2063781-2523017 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34234 CGTAGGAAACCCACAGGGCAGGACCCTAAGATCTGGGGAAAAGGGATACTGAGAACTTGT Gene GeneID:282459|PPP1R1B:NM_174647:42_cdna Constitutive 0 NULL GeneID:282459 19 GENE PPP1R1B MGC139723 protein phosphatase 1, regulatory (inhibitor) subunit 1B EMBV3_10582 TCATTAAAGACACTTCTGAGCTGGCCACATGCCCTTTCACTGTGCCTTCCTGCAGCCTGG Gene GeneID:512499|SHARPIN:NM_001109766:65_cdna Constitutive 0 NULL GeneID:512499 14 GENE SHARPIN NULL SHANK-associated RH domain interactor EMBV3_31187 CTATCCTGGGATGGGCCCTACATACAGCAAGCTTTCGGGGTTCACAGACAGTGGTTATGA Gene GeneID:100138339|SH2D7:XM_002696663:278_cdna Constitutive 0 NULL GeneID:100138339 21 GENE SH2D7 NULL SH2 domain containing 7 EMBV3_10605 GAAGAAGGAGGTAGCCTTTTTTAACAACTTTCTCACTGATGCCAAGCGCCCTGCTCTGCC Gene GeneID:527938|SRRT:NM_001083708:242_cdna Constitutive 0 NULL GeneID:527938 25 GENE SRRT ARS2 MGC139221 serrate RNA effector molecule homolog (Arabidopsis) EMBV3_14836 AAAAGCACAAGCTGGCCACACACTTAACATATAACCACCAAACATGCTACGGAGGGCCGC Gene GeneID:539561|GLS2:XM_002687576:630_cdna Constitutive 0 NULL GeneID:539561 5 GENE GLS2 NULL glutaminase 2 (liver, mitochondrial) EMBV3_42078 TTGTCCGAGATGCAGCCACGGAAACTGTGATGACCGCCATGTCACAGGAAAACACTCACC Gene GeneID:514187|THADA:XM_002691249:239_cdna Constitutive 0 NULL GeneID:514187 11 GENE THADA NULL thyroid adenoma associated EMBV3_07763 TTATTCCTACAGTCTCTGGAGTTTGTAGACCTCGTGGAGTAGTTCGTGGAACCCTGCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14548 ATCAGGCTCTGGTCTCATTCCTCACGGTGGCGCCACGCAGCCTACTTAGCCTAGATTAAA Gene GeneID:509244|TMX2:NM_001015558:10_cdna Constitutive 0 NULL GeneID:509244 15 GENE TMX2 MGC134152 TXNDC14 thioredoxin-related transmembrane protein 2 EMBV3_29125 AATATGGGGTGACAGTCACCGTGGACCATTGGAACGATGTATTCACGAGGGCACGAGGCA Gene GeneID:515991|LOC515991:XM_002697084:621_cdna Constitutive 0 NULL GeneID:515991 22 GENE LOC515991 NULL similar to ProBac7 gene product EMBV3_03648 GGCCATGGTAGGGGAGGAGTGTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAAAAA Gene GeneID:533922|NAA30:XM_002690956:317_cdna UTR3_Alt 2 NULL GeneID:533922 10 GENE NAA30 NAT12 N(alpha)-acetyltransferase 30, NatC catalytic subunit EMBV3_42579 GAGCAGGGCCAATGACATCCCACTCCAAATAATGCAAAATACTTTTAAACTAGTCCAGTC Gene BVT0102_346827 - 1 EMBV3_20742 GK000015.2:17984029-17999931 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058409 TCONS_00058406 TCONS_00058408 TCONS_00058410 TCONS_00058407 1 XLOC_036088 Coding TCONS_00058409 XLOC_036088 Coding Coding CUL5 15:17869060-17987172 j TSS44009 4449 1 TCONS_00058409_3 759 20 0.962501375824436 2.0947697472398e-17 0.000300943524806974 0.000171564546564874 0.000277386808636842 3.63785955832279e-05 0.000101959362594271 5.55385226431865e-06 0.000348915084404027 0.000136448559987075 0.000301470439733761 3.74166821559736e-05 0.00020327369002667 4.49376661871352e-05 3.71438286609831e-05 3.77009031146803e-05 9.02148472827819e-07 0.00074321702529146 0.00140705603066823 8.95523303218439e-06 0.000177963851233609 7.35691636660913e-05 0.000526949014688768 5.51963715824793e-36 1.92395685834348e-08 1.6518750746226e-11 7.27932301048134e-06 1.60726337149655e-05 8.57576965845913e-06 6.61366654412638e-05 0.000127456740938604 XM_005215786.1 CUL5 PREDICTED: Bos taurus cullin 5 (CUL5), transcript variant X2, mRNA. 0.0 5211 99.76 0.652730950775455 XR_246455.1 CUL5 PREDICTED: Homo sapiens cullin 5 (CUL5), transcript variant X2, 0.0 5963 90.03 0.992807372443246 TCONS_00058409_3 sp|Q93034|CUL5_HUMAN CUL5_HUMAN Cullin-5; 0.0 1565 100.00 0.998682476943347 2 coding 0 0 0 0 -0.0562980349653625 0.691556119533027 -0.0282087984931698 0.586891013610624 GAGCTACCCATGGAAATGTAAAGGAGACTATTTGAAGAATAAAGGTTCTCTTCAGTTTGAAGACAAATGGGATTTCATGCGTCCAATTGTTCTGAAGCTTTTACGCCAGGAATCTGTTACAAAACAGCAGTGGTTTGATCTGTTTTCGGATGTACATGCAGTCTGTCTCTGGGATGATAAAGGCCCAGCAAAAATTCATCAGGCTTTGAAAGAAGATATTCTTGAGTTTATTAAGCAAGCACAGGCACGAGTACTGAGCCATCAAGATGATACAGCTTTGCTAAAAGCTTACATTGTTGAATGGCGAAAATTCTTTACACAGTGTGATATTTTACCGAAGCCTTTCTGTCAACTAGAGATTACTTTAATGGGTAAACAGGGCAGCAATAAAAAATCAAATGTAGAAGACAGTATTGTTAGAAAGCTCATGCTAGATACATGGAATGAATCAATCTTTTCAAATATAAAAAACAGACTTCAAGATAGTGCAATGAAGCTGGTCCATGCTGAAAGGTTAGGAGAAGCTTTTGATTCTCAGCTTGTCATTGGAGTAAGAGAATCCTATGTTAACCTTTGTTCTAATCCAGAGGATAAGCTCCAAATTTATAGGGACAATTTTGAGAAGGCATACTTGGATTCAACAGAGAGATTTTATAGAACACAGGCACCCTCGTATTTACAACAAAATGGTGTACAGAATTATATGAAATATGCAGATGCTAAATTAAAAGAAGAAGAAAAACGAGCCCTACGTTATTTAGAAACAAGACGAGAATGTAACTCTGTTGAAGCACTCATGGAATGCTGTGTAAATGCCCTGGTGACATCCTTTAAAGAGACTATCTTAGCAGAGTGCCAAGGCATGATCAAGCGAAATGAAACTGAAAAATTACATTTAATGTTTTCATTGATGGACAAAGTTCCTAATGGGATAGAACCAATGTTAAAAGACTTGGAGGAGCATATCATCAGTGCGGGCCTGGCAGATATGGTAGCAGCTGCTGAAACTATTACTACTGACTCTGAGAAGTATGTTGAGCAGTTACTTACACTATTTAATAGATTCAGTAAACTTGTCAAAGAAGCTTTTCAAGATGACCCACGATTTCTTACTGCAAGAGACAAGGCATATAAAGCAGTTGTTAATGATGCTACCATATTTAAACTTGAATTACCTTTGAAGCAGAAGGGGGTAGGATTAAAAACTCAGCCTGAATCAAAATGCCCTGAGCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACGCCATTAAGCAAAAAGCTAACCTCGGAAGAGATTGAAGCAAAGCTTAAAGAAGTGCTCTTGGTACTTAAATACGTACAAAACAAAGACGTTTTTATGAGATATCACAAAGCTCATTTGACACGACGTCTTATATTAGACATCTCTGCTGATAGTGAAATTGAAGAGAATATGGTAGAGTGGCTAAGAGAAGTTGGTATGCCAGCAGATTATGTAAACAAGCTTGCTAGAATGTTTCAGGACATAAAAGTATCTGAAGATTTGAACCAAGCTTTTAAGGAAATGCACAAAAACAATAAATTGGCGTTACCAGCTGATTCAGTTAATATAAAAATTCTGAATGCTGGTGCCTGGTCAAGAAGCTCTGAAAAAGTCTTTGTCTCACTTCCTACTGAACTGGAGGATTTGATACCTGAAGTAGAAGAATTCTACAAAAAGAACCATAGTGGAAGAAAATTACATTGGCATCATCTCATGTCAAATGGAATTATAACATTTAAGAATGAAGTAGGCCAATATGATTTGGAGGTAACTACGTTTCAGCTGGCTGTATTGTTTGCATGGAACCAAAGACCCAGAGAGAAAATCAGCTTTGAAAATCTAAAACTTGCAACTGAACTCCCTGATGCTGAGCTTAGGAGGACTTTATGGTCTTTAGTAGCTTTTCCAAAGCTCAAACGGCAAGTTTTATTGTATGAACCTCAAGTCAACTCACCCAAAGACTTTACAGAAGGTACCCTCTTCTCAGTGAACCAGGAGTTCAGTTTAATAAAAAATGCAAAAGTTCAGAAAAGGGGTAAAATCAACTTGATTGGACGCTTGCAGCTCACTACAGAAAGAATGAGAGAGGAAGAGAATGAAGGAATAGTTCAACTAAGAATACTGAGAACCCAGGAAGCTATCATACAAATAATGAAGATGAGAAAGAAAATTAGTAATGCTCAGCTGCAGACTGAATTAGTAGAAATTTTGAAAAACATGTTCCTGCCACAAAAGAAAATGATAAAAGAGCAAATAGAATGGCTAATAGAGCACAAATACATCAGAAGAGATGAATCTGATATCAACACTTTCATATATATGGCATAATTTTGAATATCATGGACAATATTAAGAACCCAAATTTTGGAGTGCTTCGGCAGAAAGTTCTTACAGTTTGTGCTAGGGGAAGGTTTAGTTGGACTTTGATTACATAAATATTAAAATCTCTGCCTTACCTAACAAAACAACTATATTTTGCCAATCACATTAGTTAGCATGGTGGCATTCCTTTCATGTTGCACCACTCTGTTTTAACAGCATGCTGTTTTGTGGAGAAACTTGCATTCACAAAGAGCCCATTATGAGCTTTTAAAAACCTGATTTATACCCACCAGAAGAAATAACAGTTGGGAGGGTGAAAGTGGGGTTCTTGTTGCTTTTTTTTTTCTTTTTTTTTCCTCTCTTAGAAAAATGTATTTGCACAAGGAAGGATCTTCAGATGTTTGTGCACTGAAAAATGCTGTTGTGTTTTGTTTTTTTAAAAAATGCAATTAAAACTAGAAATAGCACTCTTGATTTCTTTTGATCAAAAGAGTGAGCTGGTCTACACAACATTGGGACAGGGCAGATATAGATGAAAATTTGGTATCGGCATATTTGCTTATCCAGTACAGGAACACCAAAGGAAGAAGCAATGGAAAGAAAAATTATAGTCTGTTTCTTAAAGTTTAAAATTTGTTGATGTTTTAAACCAGAATTGTTCTCAAAACTTGTTTGGAATTTCTAATCTTTTTCAGTCGTTTAAGAATGAGAGCCATGATATTTTGATTTATAAAGGTAAATTTAATGCAAAAGTGGGTAACTCTAAATCCATAGCAAAGTTTTCTATACAATTTTATAAATTTTTTAATAGCTTATTATGTCCTAGTTGTATATTGGGGAATAGAACAGCAGCAAATACTGTAGACTTACAGTTTTCATTATTTTTTTCTTTATGTATACAAAAGTTTATCTAACTACAATTTGGTGTTCATGAAAATCATTTAGTTGACAAGGTGCCTATTCCATTGTTGAATTTTCTTTAAATATATTTTGACAATAAATTTGCTAATTAAAAATTAAAAAAAAAAGGATCTGGAAACAAAAACCTACCAGCAATTTGCTAAAGGTACAGAATCACTGTTAGTATCCTTTATTAATAAGTCCCTTTTCTCTAATGTGAACTAAAAATTAGTGCTATCTGAGCAGGGATGAAATCTGACATGGTTAAGGGAAAATGTATACAAATATACGTATATATTTTTTTCATGAGCAGTATGGCAATAGGACACTTCAGAGGTTAATTTAAGATTTGAGCATTCATCTTCTAATATAAAGGTGAAGCCATCTTGCAAATGCTAACCTTTATTACCATCTCATTGCCAGAGTAAGAAGATATGAAGCAAAACTTTCCAAGTGAAAATATAGAACAATTTTAATGCTTACAATGAGTTAAATATTTAGAATATTACTGTTCCAGTGATTTAATGAGGATCTTGAAATAAATTCTGAAGTCTTCCAATTTTTACATTTATTGGAGGGATCCCTGCATTCTGGCAAACTTTATTTAAATCTCTTTACTCTTATTTTGTGCATAAATGTTAAAATTTCCAAAAAGGAAATGTTAGCTTTCTTAATAAATTACCTTTTATTAAATTTAATACAAAATATGACTGGACTAGTTTAAAAGTATTTTGCATTATTTGGAGTAGGATGTCATTGGCCCTGCTCAAAGGGCAAATTTTAAAAATTCAATTTGTGTGAAAGATCTGCTAGTTTTCCAGAAAGATTTGCTATCTTAAACTCAAGCTTGTTTTTTCTATTTTCATGTAAATGACTGGGATGCTGTCTTAAAAACTCTTCCAATGTTATGTTGGTGAAATAAACACTACAATGAGAGCTTTCCTGTCATCTACACTATATACGTTGTCTGGAGTGTTGAACAAATTTGAGTTCCTAAGTTGTAATCTATCCTCGTATGGTATATACGATTTTGAATGTGTGCCACTACATACTGAGATGATAATGCTGTACAATTTTAAATGGTAGCAGTTTCTGTATGTAGTAGGCTGAAATATTTTGATGAACTGCTTAATTTTTGGATTTTATTTTTTAAGTTGTATAATTTATTTTCTTGCAAAATAAAAATGTAATATAAAAGC EMBV3_27304 ATCCTGCGATGTTTCTACTCAAAGTGACATGGGACGCGAAAACTTGGTTTCAACCCGGGC Gene BVV0102_093673 + 0 NULL GK000009.2:12970906-12981371 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234717 TCONS_00234718 TCONS_00234712 TCONS_00234715 TCONS_00234716 TCONS_00234711 TCONS_00234713 TCONS_00236629 TCONS_00234714 2 XLOC_144086 XLOC_144534 Coding TCONS_00234713 XLOC_144086 Coding Coding C9H6orf221 9:12969164-12972127 j TSS176158 2215 1 TCONS_00234713_2 310 0.203611738148984 4 0.25354490209318 0.0168929382304933 0.00685276371879825 0.00276015718986004 0.00681788505174908 0.00147275155911984 1.10486516839499e-05 3.00830360111663e-06 0.0045655425126477 2.47446024368045e-05 8.20799935307683e-05 7.37115841409875e-05 0.000115227301616276 7.92599759906559e-05 1.90873057282471e-06 0.000612976670889797 1.22132776803402e-13 3.67673780728955e-19 0 4.60773080141511e-06 0.00955225347748358 0.00544778467584731 7.17742122516128e-14 9.52062585639828e-22 0 0.00505369342623541 0.00349922580181185 0.00676745691205394 7.32779679738106e-09 2.87114618316853e-08 3.86955858723715e-05 XM_868481.6 KHDC3L PREDICTED: Bos taurus KH domain containing 3-like, subcortical maternal complex member (KHDC3L), mRNA. 0.0 1597 97.26 0.428442437923251 NM_001017361.2 KHDC3L Homo sapiens KH domain containing 3-like, subcortical maternal complex member (KHDC3L), mRNA. 9e-101 372 74.95 0.241534988713318 TCONS_00234713_2 sp|Q587J8|KHD3L_HUMAN KHD3L_HUMAN KHDC3-like protein; 2e-79 245 59.38 0.719354838709677 0 coding 1 0 1 1 -2.52752148231157 0.0103021694378073 -0.078526084990322 0.276256614911302 AGGCCCAAGAAATGCGGGAGAGCGGGCTGCTCTTGCGCTGTGTGGCGGGCCGACTACAGCATGGCCTCTCCCAAGCGGTTTCCGACGCTCGTTCAGCTGGAGCAGCGAGAAGGGACGCTCTTCGAGGTGCTTGGTAACCTCACCAAGCGGCCCTACTGGTTTCACTCCGAGTACCTGAAGAGCCCGAAGGCAGTTCATCTGGAGGCCTGGCTGGTGGAAGCGATCTTCGGCCGGGGTGGAGAACACATCCCTCACGTCGAGTGTGTGTCACAGACCCTGCTTCACGTTCATCAGTGGGATCCGGACGGCGAGGCTGAAATCTTGATATTTGGCCGGCCTTATTACCAGCAGGATGTATCCAAGATGATCATGAACTTGGCTGACTATCACCGTCAACTCCGGGCGCGAAGCTCTGAGAAGGCTCCTGCCCGGGAGGCGGCCACCCAGTGGTCCCCCGACGCTGTCCAGGAGGCCGGAACCCAGCGGTCCCCAGACGCAGTCCAGGAGGCCGGGACCCAGCGGTCCCCAGACGCAGTCCAAGAGGCCGGGACCCAGCGGTCCCCAGACGCAGTCCAGGAGGCCGGGACCCAGCGATCCCCTAGCGCAAACCAGCAGGCGGCGATTCAGCTGTCATCCGGGAAAGTCCGGGAGACTGGAACCCAGCGATCCCCCAGCGCAATCCAGCAGGCGGCCACCCAGCGGTCCCCCGGCGCTGCCCGCGAGGCGGCCACCCAGCGGTCCCCCGGCGCTGCCCGCGAGGCGGCCACCCAGCGGTCCCCCGGCGCTGCCCGCGAGGCGGCCACCCAGCGGTCCCCCGGCGCTGCCCGCGAGGCGGCCACCCAGCGGTCCCCCGGCGCAGCCCGCGAGGCGGCCACCCAGCGGTCCCCCGGCGCTGCCCGCGAGGCGGCCACCCAGCGGTCCCCCGGCGCAGCCCGGGAAGCCGGAACCCAGAGCTTCCTCGAAGTTACGCAGGATCCAGATACCAGTTTCTGAAGGCGTTCCGCGCTCAGGAGCAAGAGAGCGAGGCAAGGTCCAAATGAAAGCCCCTCCTGGAATCCTGTTCTCCTAAGTCCCGTTCTGCTGCAGAAGCTGAGAAAAGAATGGTGTGCGTTTTTGATTTTTGGTTTCCCTGGTCCCCGCCACTCCCTGCTAAAGGTTTGCAAACATGAATCTGAAGAGTTCTAATAAAGAATCAAATTTCCCTAACGTCTGTTATTAATAACTGGCAGAGAGATGCGGAGGGAGAAGCACCTTCCTCCAGCAGCAGCTATTGCTCTGGACTGCTTTCCATCTAGATGCATACGTGCTAAGTCGCTTCAGTCGTGTCTGACTCTTCACTATCCTGTGGACTGTAGCCTCCTCATTCCATTGGATTCTCCAGACAAGAATGCTGGAGGTGGTTGCTATGCTCTTCACTAGGGGATCTTCCCCCCACTGGGATCCAACCCGCACCTCTGATGTCTCCTGATTGGCAGGCGGGTTCTTTACCGCTAGCGCCACCTGGGAGGACCCCTACCCATAACACAGGTGAGAGCTTTTAGTTTTGCACCCGCCCGGGCCTCAATCTCTCCCGCCTCGGTCAGGAGCTTCCCCAGTGCTCCCTTCCCCGGTGCTCGCGCCTGGCTTTGCAAGGTGAGGGACCTCCAGGGCCGGCAAGTCTGTCCTCATGGGAAAACTTTCCAATCCTGCGATGTTTCTACTCAAAGTGACATGGGACGCGAAAACTTGGTTTCAACCCGGGCCTCACGGCTGGGTGCAAGCGACTTCCCAGCTTGAGCAACTGCTGGCTAGGAGGGAAAACTGAAAGGGCCAGGACAATCCAGCAGGCCTCTCAAAGTCCTGCGCGGGTCACTCAACCTTGAGTGATGGTTTGAAGTTATTGAGACACAAGCAGTGCTGGTGACTCTTCTCGACCAATTAGTAACCACAGGAGTGGGGTGCTCTTTGTCACTTTAGGATTGAAACATACTTGACATGTTCAGTTCAGATCAGTCGCTCAGTCGTGTCCAACTCTTTGTGTCACCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTTACCCAAACTCATGTCCATTGAGTCGGTGATGCCACCCAGCCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGGGTCTTTTCCAATGAGTCAACTCTTTGCATGAGGTGGCCAAAGT EMBV3_18684 CTCCCAAAGGAAGGTTCTCGAGTGTCCCTCGGACAGTCTTTCTTGGCTGGACAACCCTAC Gene GeneID:508637|SUSD4:NM_001101904:32_cdna Constitutive 2 NULL GeneID:508637 16 GENE SUSD4 MGC143199 sushi domain containing 4 EMBV3_42068 CACCAGTGATGAGTTACTGCACAAATACAGCTCCTATGGCCTCCCCAAGTCTTCCACACT Gene GeneID:537192|PRICKLE2:XM_002696985:20_cdna Constitutive 0 NULL GeneID:537192 22 GENE PRICKLE2 NULL prickle homolog 2 (Drosophila) EMBV3_42520 GATCACGGTCACCTGAAAGCCAGGTGATTGGTGAAAATACTAAACAACCCTGAGCCCAGG Gene GeneID:508905|ZRANB2:NM_001105346:31_cdna UTR3_Alt 2 NULL GeneID:508905 3 GENE ZRANB2 NULL zinc finger, RAN-binding domain containing 2 EMBV3_17249 GAAGTGGGAGGATCAGGAGAATGAGATGGTTCTATATGGACGGAACATGTCCAGCATGGC Gene GeneID:515749|CTNNAL1:XM_002689910:19_cdna UTR3_Alt 2 NULL GeneID:515749 8 GENE CTNNAL1 NULL catenin (cadherin-associated protein), alpha-like 1 EMBV3_11179 TCACGACAGCTTCTTCGAACACTCACATCCTGTCTGGGAACAGAAATGTACAGCATGAGC Gene BVV0101_039699 + 0 NULL GK000016.2:81381524-81388471 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08277 TGGGAGCAAAACACAGAATCACAGAGGAATGCCAAGAGACAGGCAAAGAACAGGAGAGGC Gene GeneID:539841|CCDC55:NM_001046462:154_cdna Constitutive 0 NULL GeneID:539841 19 GENE CCDC55 MGC137711 coiled-coil domain containing 55 EMBV3_39653 CGTCGACTGGGGGCACATCAGGGAAAGGCCAGCAGCAATCCCTATAGAAATCAAAAGCAT Gene GeneID:514787|STK38L:NM_001101092:11_cdna UTR3_Alt 2 NULL GeneID:514787 5 GENE STK38L NULL serine/threonine kinase 38 like EMBV3_19788 GTCCAGTTTCCCTTGTGGGAGTCCTTAAAAGCTGGTTCCAGCACCGCGAGCGGGAACATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14097 CTCGCTGGGGAGAAGGGCAACTTGGAGCTCACGTTCAGGAGAGGCAAGGTATTTTTATAT Gene GeneID:507695|LOC507695:XM_002694473:305_cdna Constitutive 0 NULL GeneID:507695 17 GENE LOC507695 NULL hypothetical LOC507695 EMBV3_15027 TTCTGCCGCTGCGAGATCAAGGGCCAAGAGGCTGTGAGTATCCATCAGTTCCACGTCAGT Gene GeneID:615866|CBLC:NM_001101248:379_cdna Constitutive 0 NULL GeneID:615866 18 GENE CBLC NULL Cas-Br-M (murine) ecotropic retroviral transforming sequence c EMBV3_28890 TTCCTGACCTTCAGTGTGGGATAGCTCTTTTAGGCCCTCCTGCACCAGTACAGCCACAGC Gene BVT0102_236619 + 0 NULL GK000008.2:91928342-92522775 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28902 GGGTGGGGTTAAAAGTCACTACCTGTCAAGGTGTGTGTTCCCCTCCTGTAAATAGTGTAC Gene GeneID:282291|NFKBIA:NM_001045868:5_cdna Constitutive 0 NULL GeneID:282291 21 GENE NFKBIA MGC128575 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha EMBV3_09740 CCTCTGGGTGTCCCTGTTTGCTGCTGTCAGGGCACAGTCCTCAGGATGTTCCACCAGGGG Variant GeneID:511782|SLC39A5:XM_002687581:645_cdna 63^155 1 EMBV3_34733 GeneID:511782 5 GENE SLC39A5 MGC127070 solute carrier family 39 (metal ion transporter), member 5 EMBV3_06429 AACTAACCCCGACCTTGGAATTCTCTTCCAACTGCCAGTCTTGAGGGCTCCAGTGAAGTT Gene BVV0102_201216 + 0 NULL GK000001.2:83533269-83540705 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40571 TGGGCACCATGGGCCAGAATGTTGTGTCCAGGGAAGAGGCAAGAAGTGCAACCTATGTTT Gene GeneID:100297058|LOC100297058:XM_002690492:444_cdna Constitutive 0 NULL GeneID:100297058 10 GENE LOC100297058 NULL similar to deleted in colorectal carcinoma EMBV3_16805 AGGGGCTTCTGCCGGGAAGGACAGATGAGCCTGAACAACTTCTAATAGGTCTCTCCCTTT Gene GeneID:513392|KIF24:XM_002689800:91_cdna Constitutive 0 NULL GeneID:513392 8 GENE KIF24 NULL kinesin family member 24 EMBV3_07038 CACTATGGCCAGGAATTTGCCTTCTGGATTGCTTCTGGGATCTGCTACAACAGCAGAACG Variant GeneID:100125312|UBAC2:NM_001103344:2_cdna 430^601 5 EMBV3_42431 GeneID:100125312 12 GENE UBAC2 MGC142780 UBA domain containing 2 EMBV3_01529 GTTTCCATGCCTAAGAAATCAAGACAGGAACCCCCAGGTGAACGCCACCCCTTTGATGAG Gene BVT0102_294977 + 0 NULL GK000029.2:7240132-7294013 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162978 TCONS_00162985 TCONS_00162987 TCONS_00162986 1 XLOC_099784 Coding TCONS_00162985 XLOC_099784 Coding Coding LOC100336861 29:7238014-7242606 j TSS122265 3520 1 TCONS_00162985_1 134 0.0144886363636364 2 0.233718144195164 0.00114468827233071 0.00057595661565876 0.00056248753321429 0.000502012042888707 0.000881902285863449 0.000397095525680255 1.12396046398334e-12 1.69212176245107e-07 3.48536630188431e-16 0.000110767670714909 2.13104641678277e-05 0.000110483380353934 3.28343848817553e-25 0.000655833319763884 0.000460280332559206 4.34549017178705e-05 0 0 1.41736428753272e-31 0.00156405511295164 0.000602354413004199 9.88033121459972e-32 0.000108881728937787 5.13647296359623e-05 0.00125892331561709 0.00104254065156052 1.70631349774211e-08 3.71751568017373e-42 6.59796212173274e-06 0 XM_003588009.2 GRM5 PREDICTED: Bos taurus glutamate receptor, metabotropic 5 (GRM5), 0.0 5975 100.00 0.940909090909091 XM_005273957.1 GRM5 PREDICTED: Homo sapiens glutamate receptor, metabotropic 5 (GRM5), 0.0 3106 81.23 0.940625 TCONS_00162985_1 sp|Q3UVX5|GRM5_MOUSE GRM5_MOUSE Metabotropic glutamate receptor 5; 5e-51 176 74.26 0.992537313432836 1 coding 0 0 1 0 -0.576123106458418 0.130111763759283 -0.00713646254623916 0.884907528666603 CTATGGGGTCGCACAGAGTCGGACACGACTGAAGCAACTTAGCAGCAGCAGCAGCAGAGCTCTCTCTTGGTCCACAGCACCTAGAACAGAGCTGTCTAGACATAACAGACCCCTAGTTACAGAGCTCTCACATTCCTTCCTGGGGGTAAACCACACCAGGATCTCTCCATATCACCTCCCTGAAGGTCAGGCCACATCCTCTGAACACAGCTCCAACGGCAAGTCGGTCACTTGGGCGCAGAACGAGAAGAGCAGCCGCGGGCAGCACCTGTGGCAGAGGCTGTCGGTGCACATCAACAAGAAGGAGAACCCCAACCAGACGGCCGTCATCAAGCCCTTCCCCAAGAGCACGGAGGGTCGCGGCGCGGGGGGCGCGGGCGGCGGCGGGCCCGAGCCCCCGGACACCGGCCCCAAGGCGCGCCCCGCCGCGGCCGAGGCCGCGGAGCGCCTCGCCGTGCCGCGCGCGCCGTCGCCCATCAGCACGCTGAGCCGGCACGCGGGCGGCCACCCCGACAACGAGGACGCGCGCTCGCTGCGCTCGGAGCCCGCGGCGCGCAGCAGCTCGTCGCAGGGCTCGCTGCTGGAGCAGATCAGCAGCGTGGTGACCCGCTTCACGGCCAACATCAGCGAGCTCAACTCCATGATGCTGGCCTCCCCGGGGGCGCCCGGCGCGGGCGCCGCGCTCTGCTCGGCCTACCTGATCCCCACGGAGATGCAGCTGCCCGCCGCCGTGATGACCACGTTCGCGGAGATCCAGCCGCCGCCCGCCGCCGAGGGCCCGGGCGGCGCGGCCCCGTCGGCGGAGGGCGCCGCCCGGGAGCCTTCCCCCTCGGCGGCGGCGGCCGGGCCCGAGGCTGCGGCCGGCAAGGCGGACCTGGAGGAGCTGGTGGCGCTCACACCGCCATCCCCCTTCAGGGACTCGGTGGACTCCGGGAGCACCACCCCCAACTCGCCCGTGTCCGAGTCGGCCCTGTGTATCCCGTCGTCCCCCAAGTACGACACGCTTATCATCAGAGATTACACCCAGAGCTCCTCGTCCTTGTGAATGTCCTTGGAAACCACGCTGGGGTCCCCCCCGCCCCAAGGAGCCGAGACCCTCCGGTGTCCCCACAGACAGCAAGGACAGGCCTGGGCGCCTGCTTAAGACCCCGAGGTGGAAGACATCGCGTACACCCGCAGCGGAAACAAGAGATCAAGAGTGCTATCTACCATCCACCGACGAAGACACCAACCACAAATCTTTCGGCAGATTTTCTTCTAGTGGCCTTAGAAAATATGGGCTTTTACAAAACACCGCTTCTACTTTTGAGGGCTCACGAGGAGTCTGTTGAACCAGTTACATCCCAAGTGCTTTGCTCTAGGGAAACAAGGAGTGTGAAACAGCAAAACGGAGGGTTGAAAAGACATAGTTAATAAGATACTGTAAAAAAAAATTTTTTTTGTTTACTTTAATTCTTTTCCCAGAAGATTCTTTGATTCACCAAACATGAATGTACATTTTCTAACAAACTCAAAATCTGGGACCAAAACATCAACCTTTCTCTTCCTCTTTTTTTTTTTTTTTTTTCCCTTTTTCTTTCCTTTAAAGACCTTGGAAAGCAGACTTGGGCCCAGTATTTGCTGAGGCGTTGATATGATTGTGTCCCACGGGCAACACGCAATTGTGTGATGAGGGCCACGCTGATGTATGTAGGGCTTTTACCAGACACTTTCCAATTTGGTTGTGACCTCCTCTTCCAAAAGCCTGCATCCTGGATTCCACCTAGTTATTTCAGTTCACCTCCATTAACCAAGAAAACCAGTGGAGATTTCTTGACTATTTCACCATGTTGCCAATCAATACTGGAGTAGCAAAAAATATTTTCTGGAATACTGTTTTGTAATTCCCTCACTGGGGTGCGTTGTGTAGCTGGAAATTCTCTTTCTAATAATAATAATTCTTGAGCTCCAGCTTGGCTATCTCTTTCATGAAATGTGGCCACTCATTATGAATGCATTGCCAGCTAAAATATTTAAAATATGCATTTGGGCTTCTTCATTCATTTCTTTTGAGAACCTGACGCACAAAGAGCTCCTCTGTTCTTTTCAAGTCCCACCACTGGAAGAATGGTCCGTAGACCCAATGAAGACACTGTCGTGATTGGAGGGACTGTTCAAAAAATTAACATGATCTTAATACACTGGAGACTTTAAACTGTCAAGTCGGCTTAGCAGAGATTCAGCTATGCCAGTGAGCAGTGATTTTAACTTTTCTCGGCTGCTTAAACAGGGCAGCTATGAACTATGACACATGTAGATTTTTCAAAGCAATACAGAAAACTAAAACAGAGGAACCTTAACAGATACAAACCACACAATCTTTCTTAGCCATTCCAAAAAGAGGCAAAGCAATTATTAATATTTTCCTTTTTAAGATAATTATGAATATAATTTTGTGCACTTCATACTGTCACTTTTTAAAACTGCAGAAAAGAGATTTAAAGTTCTAATAGACATATCTGTGCTTTGATAGGCTCCTATAGATAGAATTCAGCTCAAGACCTGCATCCGCTGTCATTTCTTTCTTCCTCCCATTACAGCTATCCTCAGGTGCCAAATGTTTTTGATTTTTAAATAAGGATAGTAATAAAAGGAGGAGGTATCCTATAAATTTAAAGTCCAGTTGACCCAGCCTTATACTAAAGATAGCCTTATGAGAAAGATTTGCTGTAAGGCAGAAGTATATTTTTAGCAGAGAGAAAAATAAATAAAAACCTTTTTCCTTTTGCTCAATATCCTTATTTGGTATTTTTTATTTCACATCTACTTAAAAGAAGGAATTGAGAAATGAAAGTATATCTATTACCATAATTTATCATTCTCTACTTTTAAACGTTATAATACACTGTTTTACCTTTCCTGATAACTATCTTCATATTAAATTATATTAAATCAAATCTCCCAATATAAAACATTAAAAGCTAACATTAATTTACTAAAATAGAAATTTTTAAAAAATCAAACCTCCCGTGCAAATTTGAAAATAGCATCGTTGGAGCCCCTTGATCCCAAATATTATGAGACTCTTGAAACAGTCAATCTAGCTAAGTTTTGTGGTTTCATTGAAAGCAAATGTCTGCGTCTACTTGAAAAACAAATGTAAATATTTTGAAGTAAATATTAATATCCCTGGATTCTCATCAAAGGGGTGGCGTTCACCTGGGGGTTCCTGTCTTGATTTCTTAGGCATGGAAACCTTCCTAAGTATGCTCTATCTAAGTTTTTAAATTTGTTTCAAAGAACCATTATGTTGGTTTCCACTGTATTCTCAAATGCAAGTTTCACTGTGTTGACCAACAGGAAAACATTTTTAAAACTTTCTCCATGATCAAATTCCTTTTCTATTTTTTTAGTGACATATTTCCTTTAAAAGTATACTACCATATGAGAAAATTCATTAGAAATTAAAATTTAATGTGAATAAATTGCCATCATATAATTCTATGTGAATTAATAGTCAACATAAGAAAAATAATTTATC EMBV3_01186 TGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCATAATAAAGAGAACCCC Gene BVV0102_420690 + 0 NULL GK000023.2:5477797-5953507 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00152753 TCONS_00062753 TCONS_00063037 TCONS_00252468 TCONS_00009592 TCONS_00251705 TCONS_00115687 TCONS_00109028 TCONS_00210177 TCONS_00221188 TCONS_00037672 TCONS_00176249 TCONS_00090400 TCONS_00124583 TCONS_00109859 TCONS_00251760 TCONS_00161792 TCONS_00153777 TCONS_00023615 TCONS_00252354 TCONS_00057311 TCONS_00177370 TCONS_00165866 TCONS_00135547 TCONS_00240034 TCONS_00009135 TCONS_00129469 TCONS_00238439 TCONS_00175545 TCONS_00040583 TCONS_00073576 TCONS_00156741 TCONS_00176734 TCONS_00040195 TCONS_00137878 TCONS_00218856 TCONS_00123618 TCONS_00250700 TCONS_00039853 TCONS_00030295 TCONS_00064912 TCONS_00177280 TCONS_00206861 TCONS_00152647 TCONS_00229819 TCONS_00040147 TCONS_00148279 TCONS_00062743 TCONS_00039908 TCONS_00125001 TCONS_00031821 TCONS_00030202 TCONS_00111546 TCONS_00153219 TCONS_00185807 TCONS_00020011 TCONS_00206418 TCONS_00064867 TCONS_00252056 TCONS_00124845 TCONS_00088868 TCONS_00056728 TCONS_00240534 TCONS_00206426 TCONS_00037933 TCONS_00107735 TCONS_00006827 TCONS_00250749 TCONS_00157440 TCONS_00210509 TCONS_00022065 TCONS_00209558 TCONS_00219970 TCONS_00116955 TCONS_00238326 TCONS_00038667 TCONS_00249012 TCONS_00157613 TCONS_00153137 TCONS_00088073 TCONS_00019198 TCONS_00117619 TCONS_00031911 TCONS_00223013 TCONS_00040178 TCONS_00201770 TCONS_00107582 TCONS_00185942 TCONS_00233344 TCONS_00056147 TCONS_00230109 TCONS_00054954 TCONS_00010107 TCONS_00088288 TCONS_00190322 TCONS_00116101 TCONS_00070840 TCONS_00010472 TCONS_00223554 TCONS_00175849 TCONS_00063487 TCONS_00175199 TCONS_00224114 TCONS_00036946 TCONS_00056773 TCONS_00251546 TCONS_00161123 TCONS_00166449 TCONS_00010780 TCONS_00209529 111 XLOC_131641 XLOC_092518 XLOC_037480 XLOC_037764 XLOC_155409 XLOC_005145 XLOC_154646 XLOC_069856 XLOC_064933 XLOC_128687 XLOC_134504 XLOC_021501 XLOC_106028 XLOC_055181 XLOC_076127 XLOC_065763 XLOC_154701 XLOC_098677 XLOC_093539 XLOC_014282 XLOC_155295 XLOC_035110 XLOC_107144 XLOC_100706 XLOC_081770 XLOC_146699 XLOC_004691 XLOC_078182 XLOC_145106 XLOC_105326 XLOC_024399 XLOC_045340 XLOC_095201 XLOC_106508 XLOC_024012 XLOC_084087 XLOC_132175 XLOC_075170 XLOC_153643 XLOC_023670 XLOC_016549 XLOC_039636 XLOC_107054 XLOC_125381 XLOC_092412 XLOC_139313 XLOC_023964 XLOC_090161 XLOC_037470 XLOC_023725 XLOC_076544 XLOC_018066 XLOC_016457 XLOC_067446 XLOC_092984 XLOC_111860 XLOC_010689 XLOC_124940 XLOC_039591 XLOC_154997 XLOC_076388 XLOC_053654 XLOC_034531 XLOC_147198 XLOC_124948 XLOC_021762 XLOC_063645 XLOC_002389 XLOC_153692 XLOC_095895 XLOC_129019 XLOC_012736 XLOC_128069 XLOC_133287 XLOC_071121 XLOC_144993 XLOC_022490 XLOC_151955 XLOC_096068 XLOC_092902 XLOC_052860 XLOC_009878 XLOC_071785 XLOC_018156 XLOC_136319 XLOC_023995 XLOC_123415 XLOC_063492 XLOC_111995 XLOC_142826 XLOC_033950 XLOC_139601 XLOC_032763 XLOC_005659 XLOC_053075 XLOC_116357 XLOC_070270 XLOC_042617 XLOC_006023 XLOC_136854 XLOC_105628 XLOC_038214 XLOC_104982 XLOC_137410 XLOC_021259 XLOC_034576 XLOC_154487 XLOC_098015 XLOC_101287 XLOC_006331 XLOC_128040 Coding TCONS_00063487 XLOC_038214 NonCoding NonCoding - 15:19911470-19912752 - TSS47230 1282 1 TCONS_00063487_1 67 0.999219968798752 1 0 0.000127936029395653 9.17062658717937e-05 8.18314929850691e-05 5.31053848615394e-05 3.83862007692534e-05 4.14504082240342e-05 3.66155071199037e-05 9.3342542597709e-05 0.000142868560875806 0.000182105794932418 0.000115314176713717 0.000592086251997118 4.72528536473549e-05 0.000140849193612007 0.000199068739116394 0.0049393326901842 0.0017848333210037 0.00508423071029997 8.89727488761304e-05 7.85121412812907e-05 3.66359677067345e-05 0.00142164529096076 0.0028077711046913 0.00202140642150578 8.09897640299424e-05 8.93525617697323e-05 6.91146032189968e-05 0.000537406910919829 0.000427515932212117 0.000608492059792261 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 6e-49 199 69.48 0.399375975039002 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 TAACATCATATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTGTGTGTTCCAGACAGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATAAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGTACCACACAAGGGCCAATAAGCTCCAGAGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGACAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATTTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAA TCONS_00058453 . 3' 291441 TCONS_00058453 . 3' 292722 EMBV3_30082 CACTATTGGTCCAGAAGCATTTACAATCAATAGGTCTGGGATTATGTGGCCTCAGCTAGC Gene GeneID:616414|RGS2:XM_002686811:8_cdna Constitutive 0 NULL GeneID:616414 4 GENE RGS2 NULL regulator of G-protein signaling 2, 24kDa EMBV3_08141 ATCCGGAAACATTATTTTATGAATCTCCACACCTGACCCTGGAAGGTCTGCCCCCGCTCC Gene GeneID:617968|C25H7ORF47:NM_001102315:326_cdna Constitutive 3 NULL GeneID:617968 25 GENE C25H7ORF47 MGC148922 chromosome 7 open reading frame 47 ortholog EMBV3_39100 CTAGGCAGGTTGATAGGAAGTCTAGGGGTCCCAAAGGAGAGAGGGGTCTGGAATTCTCAA Gene BVV0101_016353 + 1 EMBV3_18751 GK000023.2:33570051-34219096 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00118490 TCONS_00012285 TCONS_00250599 TCONS_00040981 TCONS_00061482 TCONS_00165977 TCONS_00219592 TCONS_00125637 TCONS_00118456 TCONS_00111186 TCONS_00145751 TCONS_00250203 TCONS_00031886 TCONS_00233473 TCONS_00246739 TCONS_00087729 TCONS_00174808 TCONS_00211020 TCONS_00196823 TCONS_00223565 TCONS_00118491 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00132067 TCONS_00061491 TCONS_00173459 TCONS_00145750 TCONS_00072261 TCONS_00055707 TCONS_00056184 TCONS_00174805 TCONS_00023655 TCONS_00061483 TCONS_00204211 TCONS_00171428 TCONS_00207933 TCONS_00251677 TCONS_00174806 TCONS_00188145 TCONS_00059695 TCONS_00161822 TCONS_00160961 TCONS_00118487 TCONS_00232824 TCONS_00251680 TCONS_00002600 TCONS_00199364 TCONS_00207485 TCONS_00229794 TCONS_00031759 TCONS_00099018 TCONS_00209974 TCONS_00000529 TCONS_00206299 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00103962 TCONS_00251625 TCONS_00246740 TCONS_00061493 TCONS_00220566 TCONS_00118459 TCONS_00061487 TCONS_00118040 TCONS_00061484 TCONS_00210913 TCONS_00239997 TCONS_00204210 TCONS_00019195 TCONS_00010963 TCONS_00252081 TCONS_00061481 TCONS_00124524 TCONS_00216950 TCONS_00166910 TCONS_00241019 TCONS_00001867 TCONS_00174809 TCONS_00162767 TCONS_00018601 TCONS_00132066 TCONS_00022895 TCONS_00107436 TCONS_00118488 TCONS_00078426 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00206300 TCONS_00010280 TCONS_00205125 TCONS_00004603 TCONS_00061496 TCONS_00061489 TCONS_00228562 TCONS_00056149 TCONS_00125692 TCONS_00118489 TCONS_00061488 TCONS_00175330 TCONS_00173458 TCONS_00061494 TCONS_00001866 TCONS_00061495 TCONS_00218901 TCONS_00009619 TCONS_00007850 TCONS_00061486 TCONS_00001865 80 XLOC_105290 XLOC_072622 XLOC_072644 XLOC_007831 XLOC_153542 XLOC_024793 XLOC_036985 XLOC_100817 XLOC_132911 XLOC_077179 XLOC_067086 XLOC_088920 XLOC_153146 XLOC_018131 XLOC_142955 XLOC_151107 XLOC_052579 XLOC_104695 XLOC_129530 XLOC_118488 XLOC_136865 XLOC_142312 XLOC_069472 XLOC_080699 XLOC_104361 XLOC_044030 XLOC_033515 XLOC_033987 XLOC_014322 XLOC_124371 XLOC_103815 XLOC_126448 XLOC_154618 XLOC_114188 XLOC_036486 XLOC_098707 XLOC_097854 XLOC_142307 XLOC_154621 XLOC_000643 XLOC_121017 XLOC_126001 XLOC_139288 XLOC_018004 XLOC_059261 XLOC_128485 XLOC_000141 XLOC_124877 XLOC_120473 XLOC_103679 XLOC_062257 XLOC_154566 XLOC_133883 XLOC_072206 XLOC_129423 XLOC_146662 XLOC_009875 XLOC_006514 XLOC_155022 XLOC_076070 XLOC_131385 XLOC_101746 XLOC_147683 XLOC_000454 XLOC_099648 XLOC_009288 XLOC_013565 XLOC_063346 XLOC_047314 XLOC_148229 XLOC_005831 XLOC_124587 XLOC_001070 XLOC_138526 XLOC_033952 XLOC_077234 XLOC_105112 XLOC_132220 XLOC_005172 XLOC_003410 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_02433 TGCACCACTAAGAAAGATATGTAGAAGCATTCAAAGAAATGAAATTTAGTAGTTCCAAGC Gene GeneID:505129|MATR3:NM_001102486:208_cdna Constitutive 2 NULL GeneID:505129 7 GENE MATR3 MGC140178 matrin 3 EMBV3_09179 CCCTGACTCAGCTAAATGATGCTCTTGGTGACAAGTCTGAAACTCTTCTCAGAAGAGGAG Variant GeneID:338074|AOX1:NM_176668:67_cdna 510^661 1 EMBV3_04646 GeneID:338074 2 GENE AOX1 MGC128959 aldehyde oxidase 1 EMBV3_21025 GATAGTACACACTATAAAATTTCAGGTTTCTAAGCAGTTTTACACAATCAAGCTTGAGTA Gene BVT0102_376110 - 1 EMBV3_12762 GK000017.2:38027762-38045520 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075253 TCONS_00075255 TCONS_00075249 TCONS_00075251 TCONS_00075254 TCONS_00075252 TCONS_00075250 1 XLOC_046527 Coding TCONS_00075252 XLOC_046527 Coding Coding FSTL5 17:37540791-38029373 j TSS56789 4058 1 TCONS_00075252_5 717 0.0204534253326762 13 0.991720922426374 0.00058152488934506 9.62587172726551e-05 0.000438774069751016 0.000473188165404045 8.25839802238822e-05 3.76538337395572e-46 2.24024006604184e-05 0.000295474848459612 0.00117660766672874 2.29789986126935e-05 8.91660260157831e-18 2.63622913879856e-05 8.48872739978984e-14 9.39699746356136e-05 4.59122364351415e-05 0 0 3.53996456866551e-25 0.000146162588465959 0.000744652966581601 7.45495222687648e-05 0 0 1.64417648647518e-15 0.000485485493951228 0.000243778535513427 3.15749417570445e-05 3.08237554801178e-19 8.79474637587561e-06 0 XM_005217626.1 FSTL5 PREDICTED: Bos taurus follistatin-like 5 (FSTL5), transcript 0.0 7166 100.00 0.978807294233613 NM_020116.4 FSTL5 Homo sapiens follistatin-like 5 (FSTL5), transcript variant 1, 0.0 4621 86.07 0.978807294233613 TCONS_00075252_5 sp|Q8N475|FSTL5_HUMAN FSTL5_HUMAN Follistatin-related protein 5; 0.0 1409 94.25 0.99302649930265 5 coding 0 0 0 0 -0.197316739067607 0.321408172766112 -0.047641549461858 0.392706675735531 ATCAGAGCAGGTCACCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGGATCGAACTCTCATCTCTTATGTCTCCTGCATTGGCAGGAGATAACTGCAAGGCCATTGAATACAGCAAGATGAAAAGTATGCTTTTAGATTTACAAAATCAAAAATACATTACACAAGACAATGAAAACCCTAATGGTGATGACGTATTTCGGAAGAAGTTGCTGGTGGATCAAATGTTTAAATATTTTGATGCCGACAGTAATGGACTTGTAGATATTAATGAACTAATCCAGGTGATAAAACAGGAAGAACTTGGCAAGGACCTTTCTGATTGTACTTTGTATGATCTACTGAAATATGATGATTTTAACTCAGACAAGCACCTGGCTCTTGAAGAATTTTATAGAACATTCCAGGTTATCCAGTTGAGTCTGCCTGAAGATCAGAAACTAAGCGTCACAGCAGCAACGGTGGGGCAGAGTACCGTTCTGAGCTGCGCCATTCAGGGAGCACTGAGACCCCCCATCATTTGGAAGAGGAACAATATTATTCTGAACAACTTAGATTTAGAAGACATCAATGACTTTGGAGATGATGGGTCCTTGTATATAACCAAAGTCACCACAACTCACATGGGGAATTACACCTGCTATGCAGAGGGCTATGAAAACATCTATCAGACTCACATCTTCCAAGTGAATGTTCCTCCAGTAATCCGGGTGTATCCAGAGAGTCAAGCCCGAGAACCTGGAGTTACTGCAAGTCTCAGGTGCCATGCAGAAGGCATACCAAATCCTCAGCTTAGCTGGCTGAAGAATGGAATTGATATTACACCAAAACTGTCCAAGCAACTCACACTTCAAGCAAATGGCAGTGAGGTTCATATTAGCAATGTGCGCTATGAAGATACAGGAGCATACACTTGTATCGCAAAAAATGAAGCAGGAGTGGATGAAGACATCTCTTCTCTTTTTGTGGAAGATTCTGCTAGAAAGACCCTAGCTAACATATTATGGAGAGAAGAAGGTCTGGGAATTGGGAACATGTTCTATGTTTTTTATGAAGATGGAATCAAAGTGATACAACCCATAGAATGTGAATTTCAGAGGCACATTAAGCCGAGTGAAAAGCTCCTTGGATTTCAGGATGAAGTCTGTCCCAAAGCTGAAGGTGATGAAATCCAGAGGTGTGTGTGGGCCTCAGCTGTCAATGTCAAGGACAAGTTCATCTACGTCGCACAGCCAACTTTGGATAGAGTCCTTGTTGTTGACGTGCAGTCTCAAAAAGTTGTTCAGGCAGTAAGCACAGACCCCGTCCCAGTTAAATTACACTATGACAAATCTCATGACCAGGTCTGGGTGCTCAGCTGGGGTACAATGGAAAAGACTTCTCCAACACTGCAGGTGATAACCCTGGCCAGTGGGAATGTACCACACCACACCATCCACACCCAGCCTGTGGGGAAGCAGTTTGACAGGGTGGACGATTTCTTCATTCCCACCACCACACTCCTCATCACCCACATAAGGTTTGGATTTATTCTTCATAAAGATGAAGCTGCACTACAAAAGATTGATCTTGAAACCATGTCATACATCAAGACTATTAATTTGAAGGACTATCAATGCATCCCGCAGTCACTAGCATACACACACTTGGGAGGATATTACTTCATTGGCTGCAAACCCGACAGCACTGGGGCAGCTCCCCCACAGCTCTTGGTGGACGGTGTCACCGACTCAGTCATTGGGTTCAACAGTGACGTGACGGGCACTCCATACGTCTCTCCAGATGGACACTATCTTGTCACCATCAGTGACGTGAAAGGTCTTGTGAGGGTCCAGTACATCACCATCAGAGGAGAAATACAGGAGGCTTTTGATATTCACACTAATCTGCACATATCTGACCTGGCCTTTCAGCCATCCTTTACGGAAGCCCATCAGTACAACATTTATGGTAGTTCAAGCACACAGACAGATGTGCTCTTTGTGGAGCTTGCCTCCGGGAAGGTTAAGATGATAAAAAGCCTTAAGGAACCACTCAAGGCAGAAGAATGGCCTTGGAACCTGAAGAACAGACAAATCCAGGACAGTGGCTTGTTTGGTCAATACCTGATGACTCCTTCCAAGGACTCTCTCTTTATACTTGATGGACGACTCAATAAATTAAACTGTGAGATCACTGAAGTTGAGAAGGGAAACACAGTCATCTGGGTTGGAGAAGCCTAGAAGCCCTGTTAAATAATTATTAAATCAAGAGTTTTCCAATACACTGCACTAATCCATTATTTAAATTTACAGTTTAACTTTCTAAGTTTGTATCCTAGCCAAACATCAGTTATTTGGATGGCCCAAATAAAATAGTTTTTTTTTTTTTAAACAAAGACATACACAATTATTAATATTGGTTGATTAGAAATAGTTAACACAGTATTTAATGAGAAACTATTTAAATTATAAGAACCAAATCAACTGTTATGTTTTTTTCCAATAGAATAGGAATTTAAATAATTAAAAATAACTCAACTGCAGGGAATTTCCAATGAATTCTAAACACCATTTCATCTTGAGGGTTATTAGTCTATTTTTTTTTCTGTCCTTTTAGTATGCTTAAACCAGAAATAAAAGATGTTGTAGAACCTTAAAATTCTTAATTCAAAATATTCTGTCCCATCCACTGTTTCTAATCTTTCGTGCCTTGAAAGGAATGTCACAAGAGGAAAAGGAAGGCTAAAAGCTGCATACGGACCACTCTCATCACTATAAATTTCTTGTCATTTAAAGAGAAAAGTTGAACATCTTTTGCACCAAACCCAGCCTTCAGTCATTTGTCTAACCCTCAATGAAATATCATTTGAAGACATAAACTGTCCTTAGGCTGTACACAGGTGACAAATTCTATTTGACACTCACTGTATAATCTGCAGCATGCTATGGAAAATGGGGAGGAAGGGAGGAAAATAATTATGGTAATATGTTTGCAGTGTATTCGTGACTCATTTTGCTTTCAATCACGAGAGTGCATTATATTTTTAATGCAAGTTTGTCTGGGATGTCAACTGCTTACAAATATCTCTTATTAGTGGAATAGACTTTTTTGTTTCTTATGATGTAGTCCAGTGTTGCATTAGCAGGAACTTTTATTTCCAAAATAGAAGCATTATTTGTGTCTGCTTAGAGTAAACCACATTTAGGGAAATTAACAACAGAGAGAAAAAAAACTGACTAGAGAACTGATGAGTATTAGCGGTTTAGGACAATTAGTAACAGAAATTGGGAATTAGGGGGTAGCACCACAGTGGTGAGAAAAGATGTACTTCTCTATCGCCTTTGCTATTTAAATATAATCCATCAAAGGACTCATTCCTTAATAACTTTCCCAAATGACTTCTGCTTAACTCCTATGTAATCCTTAAACAACTCTCTCACTGTGTGTCAAAGTTCAAAACCTAACTAATCCTCTTATTTGAGACACTGCATAGAAGTAAAAATCATTGCTTTCATTTTCCAGGGCAAATAAAAGGCCAGTAGAAGTGCATTAAAACTAGTAACTTGGTTTATTGAAATAAGCAGATTATTATCCAGGCTTAAAGTAAAAGCTTACGTTGTTTGGAGAATCTTTTTACTTATTATATTTTTGTTTTATTGTTGCTAAAAATGCTAATGTACTGTTGAAATGACCTCCATTTCCTGAAGGTAATCCAATAATGTCTTTTTTAAATACAAATTTTACTCAAGCTTAATTGTGTAAAACTGCTTAGAAACCTGAAATTTTATAGTGTGTACTATCTTATGTATATATAGCATCCTGAACTATGTGATAACAGTAGATTTATTCTTAGCTTAAGGAAACATTATGGGAGGCAGATTTAATGGACAACAGAAGTTAGCTTATGTTTCTACTTACCTGCTTTCCTTTTTAGCAATTTTCTTCTTTGTGAACATGAACCACATAAAGTGGCTGTGACCTAATGATTTAACCTAAGTCTGTCTCATACACCCTTCTTTGGTAGCTGACACCATGTGGCTGCTTTGTCTGTAGACACTGCTTGATAAAAGAGAATA EMBV3_15836 GGACGTCCGCCGGCGCTTAACACTAGTGATTATTCGAATTCCCGCCGCCGCCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_35507 GCAAAAACTGAAGGACTGTAGTTAGCGGGGATGATGTTAAGTGTGGCCAAGGACACTGCG Gene GeneID:523601|EMX2:NM_001075845:54_cdna Constitutive 0 NULL GeneID:523601 26 GENE EMX2 MGC137932 empty spiracles homeobox 2 EMBV3_27997 AAAGATGCTCTTTAGCCCAGAAGAGATGGACCTCCCCCACGAGCAGCCCCAAGAAGCCCA Gene GeneID:539976|LEPRE1:NM_001103291:263_cdna Constitutive 0 NULL GeneID:539976 3 GENE LEPRE1 MGC139555 leucine proline-enriched proteoglycan (leprecan) 1 EMBV3_21232 TCAGTCCTGTGGATTTGTGTTAGAGTGATGGTGGAGGCAGAGGGCAGGTGGACTTGTCAT Gene GeneID:782739|LOC782739:XM_002690731:434_cdna Constitutive 0 NULL GeneID:782739 10 GENE LOC782739 NULL similar to ribonuclease, RNase A family 4 EMBV3_01766 CTACGATAGCCAGGGTCTCCTGATTTTCAGTGGAATGGACCTCTGTGACTGCCTCGATGA Gene GeneID:523894|C15H11orf46:NM_001031761:35_cdna Constitutive 0 NULL GeneID:523894 15 GENE C15H11orf46 C11orf46 FLJ38968 MGC137118 chromosome 11 open reading frame 46 ortholog EMBV3_39862 GGGCTTCACTCTCCCCGTACAAGTGTTACCAGAGACACTTGGAGTCAAGCAAAAGCAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37489 AGTGTCTTTCTACGGAACTCCACCCCATTCCCTCATGCCCCTAACCCAACCAAGCTGGAA Gene BVV0102_094961 + 0 NULL GK000010.2:83057786-83187039 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022690 1 XLOC_013360 NonCoding TCONS_00022690 XLOC_013360 NonCoding NonCoding - 10:83093280-83094193 - TSS16580 913 2 TCONS_00022690_1 59 0.382256297918949 1 0 0.000700402743403324 0.00370211714531517 0.000131765596628625 7.27636592829332e-05 0 7.83579449632386e-06 0 0.000459961555841876 0.000298149135030831 0 0 0 6.28539731124372e-06 0.000847543494199384 0 0.000376068890212478 0.0031640769244434 2.74818098336443e-05 0.000286680963255352 0.000126027331881232 3.32500837481935e-06 0.00056081749183512 0.000582797775344955 0.000146897173345243 6.92469089069328e-05 0.00244297717267739 3.85047809384296e-05 0.000168327220840054 0 0 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 1e-82 311 88.93 0.265060240963855 0 noncoding 0 0 0 0 -0.727716138990077 0.0296325431969778 -0.00731414558353816 0.897345990933509 CTCCAATATTTTGGCCACCTGATGTAGACAGCCCATTCATTAGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTGGGAGGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCATCACCAATGCAATGGACATGAGTTTGAAGAAGCTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCACGCTGCAGTCCATGGGGTTGCAAAGAGTCGGACACGACTAAACAACTGAACTGACTGAGGCGTAGAAACTCTTTCTCGAAATTCCTCACCATTCATAGAACTGCAGCTGTTGTGATCTCAACTTGTGGTCCGAGTGGGAACAAACAGCTCTGCTGCCTCCTGCCTCCTCGGAGCCTGTCTGTCCAGAGGCGAGCGTGGCCGTCAGGTGGACGAGTCAGAGTCCTTCCCTGTGGTTTTTTTTAATTGAAGCTTCGCCGAAGGAGTGAATGCTGTCCTCTCTATTGGTGATGTGGCTGATGGTCGGCCTGGGAGCTGTCTGAGCCTGGACAAAGCGGGCCTGAAAGGACCCAGCTGGCAACAGGGGCGGAGGGGTGCAGATCTGAGAACCTGCAGAAATGCCTCCTCTGAATCCTGGGACCCCAGTTCCAAAGGGTGATCCATGCAGCGGCCAAGCCTGACTGTGTGAGCCAGCCTCAGTGTCTTTCTACGGAACTCCACCCCATTCCCTCATGCCCCTAACCCAACCAAGCTGGAAGGAAGTTACCAGGCACAGTCCATGCCTCCTTGAAGGCAGAGCATTCCTATAAATTATTTTGAAATTCTTCTGCATGGAAGATTTGTCTCTCCTCACCCATTTATTTATGTTTCTAATCATTTCTTTTACTTTTTTTGGTGTTACTTTGCAGTCTGTTTTTTTGAATTTATTAAAATATAGTTGATTTATAATG TCONS_00015039 . 3' 2498 TCONS_00015039 . 3' 3410 EMBV3_24287 CAGAGGAGATGGGCAGTACTGAAAGCAGACCTTGCTTCTTGATGACAAAGAGCCTGAAGG Gene GeneID:512481|ERGIC2:NM_001075563:2_cdna Constitutive 0 NULL GeneID:512481 5 GENE ERGIC2 MGC139793 ERGIC and golgi 2 EMBV3_18153 TCAGTGGGTGCCTGGGGGCGGTAGTGGTTGTAGTTCTGATTTCTTTATTTGTAATGGTGC Gene BVT0102_206054 + 1 EMBV3_15958 GK000012.2:53156626-53213384 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18054 TCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCCTCGGATCGGCCCCGCCGGGGTCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28071 GGGCGATTGGGGCAAATGGCTCCGCTTATGTGGATCACAGAGTTTTCATCTGTAACATGG Gene BVT0102_300440 + 0 NULL GK000001.2:132191686-132449821 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002253 TCONS_00005297 TCONS_00002255 TCONS_00002250 TCONS_00002254 TCONS_00002249 TCONS_00002251 TCONS_00002252 2 XLOC_000557 XLOC_001234 NonCoding TCONS_00002254 XLOC_000557 NonCoding NonCoding CLDN18 1:132189809-132195753 x TSS1150 3587 2 TCONS_00002254_6 87 0.181488709227767 3 0.396937573616019 0.00412551207860974 0.00246627597139055 0.00264307851775532 0.00248365075248236 0.00283534596468313 0.000254796524164838 0.00139209391600136 0.000973041311632894 0.000528681983453389 6.06942891866411e-05 3.49314588814847e-05 4.29830502370535e-10 0.000848149722084103 0.0023864140754511 0.000896095887682012 4.37800353122088e-20 0 0 1.43971374106813e-07 0.00566649966768166 0.00180806509157968 9.92225772999408e-23 4.85435279742571e-25 0 0.00180244184962297 0.00431809189879399 0.00230122586451616 6.71481157645056e-05 2.9692097774348e-05 0.000167197354277603 XR_239764.1 LOC100848447 PREDICTED: Bos taurus uncharacterized LOC100848447 (LOC100848447), 3e-64 251 86.10 0.0604962364092556 0 noncoding 1 0 1 1 -1.80501695485228 0.0709597211384572 -0.0381803376724886 0.622446935240293 ATGTCCTGCCTTCATTTTGAATACAAGGTCTACATAGCCCTCTTTGACATGGGGCCAACTTCTCCTCTTACACCTCTGATGGGAGCCAGTGCTGTGAGAGTCCTGCCCTGAGCCCAACTCCAAGGTCCCTCCTGGCTGCGGTGAAAGCAGCAGCCGGCTCCCGGCCTCATCTGTGCCCACGCCTACCTGGCAGGCCCAGGATGGTGAGGAACCAAATGAAGACCATGTGGCAAGCAGACACAGAAGTTCCACAAAAGGCCATGAGGAGGAAACAGGCAGGCTGGACCAGAGACCCTGACCTGGTTACTGAGAGGCCTAGCATCTGCTCCTGACCCGGTCCTTGACATGCTGTGTGCTGGGCGATTGGGGCAAATGGCTCCGCTTATGTGGATCACAGAGTTTTCATCTGTAACATGGACAGGATAAGCTGAAACACTTCAGCACCCTTTCAGGTGTCATACACTGTTCTCCTCTACATTTTGCAGAACAGTCTTTACTACAGTTGGTCAAAATGTCAGGAATCACCAAAACAGAGACTTGGCCAGCCATCAGCCAGTGTGTTTTGTAGACACAATTTGATTTTAGAATTACATTAGAGAATTGATGGACCTGCTACTTCCTGTGGGTGGTATATGTCTGGCGTCTGAATTCAGACACATTTTAGCGAGACGTTCCTTGAATCTGGATGTCAAGGCCCTGATACACACCTATACCCCAATCTCTAGTCTATACACGTTCTCCAGGAAACAAGCCTGTGCATCTGGACATTTCAATGTTATCTTGGGTGCACCCAGTCACCACTCCCATGGCTTTATTCCCAGCAAACACAGAAAGCAAATATGCAAGGTCTCCCCTCTGATTTGAATGGAGGCAACACTCCCCTCAACCACATACCTTGCTTTAGGTTCTGTGATCAGGGTTTGCATGGTAAGAAGAATGAGCCAGAAAGCCCCAAGAAGAGAGTAGGCAAGAGTTATACGACTTAGGTGAAGTCCTGTTGGTGGCTCTGTAACTCCTGAACTGAGCTATAAGGCCAAGTCTAAAAGGTGGGGAGGGGACAGCTAGAAGTGACCCTGGTCTCTGCTGGTGGACGGGGATCAACCAATTAGATTGGAAAATGTTAGAATAATTCAGGAATGATTCTGCCACCGTTCCTGTGGACAGAGCTCATTTCACTCTTATTTCAATTAAAAGTTAGGCTTTTTATTCAGAAAGATTTATAAGAGTTTTGTTTCCAGTTGTTCATTTTATGACACTTGTTTACACCCTCACCCCCATCATTGACCACCCAAATGTAGATTGAAAATGGCAAAATTAAGAAGAAAAGGTTATTATAGTTACCTAGTTTCATTCATGACAGTTTTCCCTCTCACTTTCCTATGAAAATGTTTTTATGCAAAATTTCAAGACAGAATAAAAAGATATTCAGGTAACAATGAATTAATCTTTCTTTCTTGTTTGAAGTGGTGACAGTGACTTTATATTTTTGGAGGAAGGAAAAGTTAGCTTTAAAGGATAAAGTAAAGCTCCTTCTACTTAGGCAGAATATTGAATGAGTAGAGAGGGATTCTAAGTGTACACACTTTAAAAAATATGAAATAAGTATACATTTACATGTGTGCAAGCTCAGTCATGTCCAGCTCTTTGTGACTCCATAGCTCCTTTGTCCATGGAATTTTCCAGCCAAGAATTCTGGAGTGGGTTGACAAGTGTTAACATGCTTTAAAACATGTGGAAAATGGGATTTTTCACTTCCTGGTGAGTTTTCTGTGCTCTAGAATGAGTGGACTGCTGCTTTAGCAGTCACTGCTAAAGAGTAATTGGGGGTCCACAGAGAAACATCTGGCTTCCTTGTTTATGGCAATGGGCTTTGTTAAAATATATTAAATGTATCTCTAATGATAATGACAGTTCATGGTCTGATTATAATAGTATATAATAATGATAACAATCCATGATCTCATTGTGTTTAACAATAATGGGTCTGTTTCAACTTTGTTTAGTCACTTTTACAGTGAAGCAAAAAATTTTGCTGACTTCTTGAGGGGAATCCTCCCTATATTCAACTTTAAATATGGTTCTGGTGTTGTCATTTCAGGTTGTACATTTTCAGGAGCCTATGTTATTTTACTGATATTGGAGAAAACATTTCCCTTAACTTTTCTTTACCTTGTTAAAGGAATATTAATACAATATCTATGCTAATTAGGCAATATGGCAGTCAAATATCAATATAAAATATTACAGCTAGGAATATAGGAGGAGTTAAATTAGTATTATTAGCAAGACAAATGATTGATATATCCATTGATTTTTTTCTTTTAAAATATTAACACATTTTATAGTCTTAACTTCTGACTCTACCTTTTAGTGCTCATAATAGAAAATTTAGAAGTGGGAAAATGTTGACAAATCTTAGTCATAATTTTAAACCTTACACAAAATATTTGGCATACTTTCTTTTTAATCTATTCTCTGTATATATTTTTTACATAATTAAGAGATCATACAATTTACTGTTTTTCTCTTTTCACTTAATTGCATACATATTCAATTAAAGTACTTTGTAAACATTGTTTAATATATTTAATCTTAAATATTTAATCTATGAATATGTTAGTATTTCATTATATAGAAATGCTGGACTTCCCTGGTGGCTCAGACAGTAAAGAATCTGCCTTCAATGCAGGAAATCCTGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGTGAATGGCTACCCACTCCCAGTATTCTTGCCTGGAGAATTCCATTGACAGAGTAGCCTGATGGGCTACAGTCCATGGGATCACAAATAGTTGGACACAACTGAGCAACTAACACTTTCACTTTCATATAGAAGTCCAACTGTTCACCAAAACAGCATCTATTCTTACATAATTAGACTTTACCCCTCCCCCAGTTTTTTGTTTGTATCTTTTGCCAGTATTTCTGATTACTATTTTAGGACAGATTCCTAAGACAGGAATTAAGATGCCAAAGGGTATGAGGCTTTAAAAAAATCTTTTAAAATCTTTTTTATGTAGAGGCAGACTTTTTTCCTATGAATTTTATTCCTAGTAAACAGCATCTGAAGCATCAACAGCATTTGAAAGATCTTGCCTCACTGAAACCCTTACCTGCTTTGTGAATTTGTTGTTATATATGATCACATGTTTAAATTTGCATTACTTTGATTATTAATGAGTTTGAAACTATTTTTTAAACAAATATTTGTGGAGTGTTTGTTTTTCTTTTTTGTGAATTATCACTTCTTCCTCATATATTTACTGGAATTTGGAATTTTGTCTATCAACTTACATGAATTATTTGTTAAGGATCTTAATATAATGTTATGATTACTAAAAAGATCTTTTCACATTGAATATTTGCTTATTAATTTTTTTCATGGTTTTAGAAAAATACAGTATTTTCCATTTACATGTTCACAGTACCTGGTGCATAATAGGTGCTTAATAAAAATCTGTTAAATGATGTAGTAAAATGAGTGTTCTTTTCTATGCTTAGGAACTTATTTTCCATTTAGAAATGATACTAGAATTATTTTAGAATTTTAGAAAATT TCONS_00005296 r 5' 0 TCONS_00005296 r 3' 1524 EMBV3_07352 GGCAACAGATTGGACTCAGCTACCTCAGGTACTCCCAGATTTGTGCAAAAGCCATGAGAG Gene GeneID:100140105|LOC100140105:XM_002686294:162_cdna Constitutive 0 NULL GeneID:100140105 3 GENE LOC100140105 NULL similar to ATP synthase subunit epsilon, mitochondrial EMBV3_26030 CCCCCCAGGTTGGCAGGTGGCGTTATTTATTGATCCCGATGCTTTGTGTTCGCCTTGTAT Gene BVT0102_098699 + 1 EMBV3_24040 GK000018.2:53703075-53754943 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08021 ACTTATCCGAAAAGCTAGAGAGGCACCATTTGTCCCCATTGGAATGGCAGGTTTTGCAGC Gene GeneID:100296944|LOC100296944:XM_002691369:230_cdna Constitutive 0 NULL GeneID:100296944 11 GENE LOC100296944 NULL similar to HIG1 domain family, member 1A EMBV3_31286 CAAGAGCGACAAAAAACAGCAGGTGATGGATGGTTTGGTATGAAAGCGCCAGAACTGACA Gene GeneID:511258|DNTTIP2:NM_001075506:132_cdna Constitutive 0 NULL GeneID:511258 3 GENE DNTTIP2 MGC140493 deoxynucleotidyltransferase, terminal, interacting protein 2 EMBV3_17549 AGCCCCCACTCTTAGCTGGTAAATAGATTGCACTGGACACAGCAGCCTTGTAAACACTGG Gene GeneID:503684|HMGCS2:NM_001045883:17_cdna Constitutive 0 NULL GeneID:503684 3 GENE HMGCS2 MGC137181 hmgCoA 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) EMBV3_09376 CTCTACCACACCTGCCTGGCCGTGCTGTCGCCCTGTGGATTTCTTGACTGGGGACAGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08549 CTGTTGTGAGGCCCTGGATAAAAGATCGCTTCATGGCCCCAGACATCGAGGCAGCGCACA Gene GeneID:615205|HAL:NM_001105440:67_cdna UTR3_Alt 2 NULL GeneID:615205 5 GENE HAL NULL histidine ammonia-lyase EMBV3_06905 CTTCGAGCTCCGGGAAACGGGGACTCCTTTGGGGCTTCTCCAGATTTTGTATGCTGTTAT Gene GeneID:100138505|LOC100138505:XM_002687978:24_cdna Constitutive 0 NULL GeneID:100138505 5 GENE LOC100138505 NULL similar to chromosome 22 open reading frame 9 EMBV3_04065 TGGAGAGTCACAACACTGTATAAATAATGAAGGCATGTACAAAAGACTCCATGTAGGAGG Gene BVT0102_120323 + 0 NULL GK000013.2:32515629-32530316 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38335 CGACATGACAACATTAAACAATCAGATGAGGTGTATCGCCGGGGGCTTCAGGCAATACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30588 TCCCTCTTCTGCCATGTAACTGGAGGGTGCGATGAGTTGCAAACAGCTGGACTGTCAGGC Gene GeneID:526370|LENG8:NM_001102100:178_cdna Constitutive 0 NULL GeneID:526370 18 GENE LENG8 MGC151846 leukocyte receptor cluster (LRC) member 8 EMBV3_18655 CCCTTATTCCAGTCATTGTATTCCTGTACTTTCTGCTCTTCTGCTAGTATCCAGGAGTTG Gene BVV0102_330727 + 0 NULL GK000009.2:51597142-52048247 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237354 TCONS_00237356 TCONS_00237355 1 XLOC_144696 NonCoding TCONS_00237356 XLOC_144696 NonCoding NonCoding - 9:51599270-51601993 - TSS177464 1081 1 TCONS_00237356_2 94 3 0.603967670830272 6.29310111858212e-05 1.90649410440556e-07 0.000188318294581308 1.65072040903258e-07 2.28361204022384e-05 0 1.16329939176215e-07 0 0 8.05841801252567e-08 4.5953365129079e-08 8.60015112166168e-05 0 0 0 0 0 0 1.3267225695505e-05 3.26371643229628e-05 0 0 0 0 2.56366315170906e-05 1.53138481956004e-07 2.37354866432189e-11 1.41105217816626e-05 8.32328990154278e-08 0 0 noncoding 0 0 0 0 -0.478777151424673 0.215234451485607 0.0279054767690202 0.567793353420029 GAGAATTCATCATGACTAACGAGGAGCGGAGGTCTTTGGGGAGTGGCTGAGCTGTTTATAAATCACCGAGTTGAGCACTCGCCCGGGCAAGGCGCTTTGGCGGAGAATTTCCACGTGCCCTGTGTTTATGAGCCGGGACTTCACTGACGATGACTGCTCGGAGATTCAGCCCATGCTGACGTCCCAGGTCTCCACTCCACCCCTTCCCCCCACCTTCGCTTCATTTCGCTGGCAGGCAACGGAGCCGAAACATTCCCAACAGGGTCTCAGCAAGGGCTCAGCTGAGTCGGTATCCTGACCTGGACTGGTCTGAGGAATTGGTGCGGACTTCCTACTGCACTGCTTGGAGAGAAAATAACTCAGAATCCGAGCTAAACCAAAAGGATATTTATCCCCACATTGTCACACTTCTCAAAAGCGTGAGCCAGACCTGGGTCTTAGTAGTGCCCAGCACCTTGACCAGAATCTCCCAAAGTCTTCACATTAGTAACACTAATGATATCAACCTGTACACTCTAATTTGAACTAGATTTTAACTTCATCTAGTAAACACACCATGTGTAAAATATCATTTATTGTATTGCTCCATACCAAGTCTTGGCAGAAAAACCGCCATAATCACTCCTAAACATTGAGCTGAAAGGATGCACTTATTAAGATAGAGGTGAGATGGTATTTATTCATTTGATAGATCTTAATTTATTTCTTATTGATGTTTTAATAGTTTTATGATAATGGAAATCAGGAAACAAAGGGAATTTTCTTCCAAGGTGGCAGCTGGTTTAAACTTGGGTAAAATTACCTACTGGGATTTTCTTTTTAATATATCCACCTTGGAGGAGGATTCCAAGTCCCTTCTCTTATTCTCCTTTCTCCCTTATTCCAGTCATTGTATTCCTGTACTTTCTGCTCTTCTGCTAGTATCCAGGAGTTGTTTGAGAGCTTCCCCACATTTAAATGGAACTTCTTTGCTAAGGGCCTACAGAATGTCAAAACTGAGGTTTCCACTTTAGAGCTTCAGCTTTAAACAACCAATCCACACAAAGAGGCAGCTGGCTCCTTTAATGAAAACCTCCTTAGA TCONS_00237353 s 5' 2130 TCONS_00235543 r 5' 1874 EMBV3_07228 GTTCAGACAAGGTTAGCTACTGAGGTAGAACCAGCTGACACAGCAGAGTAGAGAACACAG Gene GeneID:787358|LOC787358:XM_002690491:441_cdna Constitutive 0 NULL GeneID:787358 10 GENE LOC787358 NULL similar to transmembrane protein 202 EMBV3_30871 GGCCCTGAATGGATGCAAGAAAGTGACTGAGGGAATCGGCTTTCTGAACTGCAAAGTGCT Gene BVV0102_282728 - 1 EMBV3_05490 GK000028.2:36211731-36934599 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08106 GGATGTGTATGAAGATGATTATGGGATCTTGGATCTTGGGGTCTCTCAACTCCCTGGCAC Gene GeneID:506034|LOC506034:XM_002689116:72_cdna Constitutive 0 NULL GeneID:506034 7 GENE LOC506034 NULL similar to olfactory receptor MOR270-1 EMBV3_06983 GGCCCCTTGCGGCTCTTTGTACATCTATATTAGCGTTCCGCACAGTTCCATCACACGGAA Gene BVT0101_014921 + 0 NULL GK000008.2:76232553-76329356 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232757 1 XLOC_142241 NonCoding TCONS_00232757 XLOC_142241 NonCoding NonCoding - 8:76250153-76251022 - TSS174261 869 1 TCONS_00232757_2 70 1 0 0 0 0 0 0 0 0 0 2.72386585882245e-05 0 0 0 0 0 0 0.00103336265380809 0 0 0 0 0 0 0 0 0.000127566845145575 0 0 0 0 0 0 noncoding CAGGCTGCCTGGGAACTGGGGGGCACAGAGCTTGCAGTGACAATCAGGCAACCCAGCCATGATGTGCTGCAGAGCATGGAGGAAGAGGAAATTTGGTGGGTGTGGGTGTGTCAAGAACTTCCACCCCGACTCCACCCCACCCCAGAAACCGCTATTATCCCTCCTCAGCACCCTCTCTGCTCCTATCTTAAGGCCCACATCACTTCTTGAATCCTGTGACTCAGGTCTCCATCCTTCCACCACCTCTGCCCTACTCTCTCCCAGCCTGTGATCAGACTGAAGGCAGGACACCGTCCCTGGGCTCCTAATGGCGAGCACAAGAGGAGAAGGATGCCGAGGAAGCATCAACCCTGGTTTACTGAGTCAAGGGATGAATTAGAGAAGCTGGGAGCTCAGACCTCGGTGGTCACAGGTGCCCAGGAAGATAGCAGGTGACAAGTCAGGCAGAAGCAGCAGGGCAGGACATTGGTTCAGGAGTCAGAATGGAGCTGTAACAATCCTCAGCTCTGCCCAAGGCTATGGGGAAGGCCGGCCGCTCAGGACGGGCCCCTTGCGGCTCTTTGTATATCTATATTAGCGTTCCACACAGTTCCATCACACGGAACTGACCGGGTTTCCATCCGTTTGGTTAATGTGTTTTGAATCTCTCCCTTGTACTTATACTCCATAGGGTACCATCTGTCTCCTCAAATAGAAAAAAAAAAAAAAGCAGAGGTATCATAAAAAGATAGCAATCTAATGCTGTCACTAAGGCACAGAGAGAAGGCGATAAAAATTCAGAAGAGAAAGAGGTTAATTTCACTTGAAGGAGCAAGGAAGTCTTCATGGGGATGGGGCAATCCATAAGAACCTCAACCTGGACCAAAGTA TCONS_00228166 TCONS_00228167 TCONS_00228168 TCONS_00228169 TCONS_00228170 TCONS_00228171 . 5' 17602 TCONS_00228166 TCONS_00228167 TCONS_00228168 TCONS_00228169 TCONS_00228170 TCONS_00228171 . 5' 17602 EMBV3_43344 AAGGAGCTGCTGGTTGACTGTTACAAACCCACTGAGGCCTTCATCTCTGGCCTGCTGGAC Gene GeneID:617154|LOC617154:XR_084555:337_cdna Constitutive 0 NULL GeneID:617154 29 PSEUDO LOC617154 NULL similar to PNG protein EMBV3_22988 GAAGCTGAGACTTACCATTAATAAGTTGAGTGGCAGGCCTGGTATGCTGTGTCTTGTTAC Gene GeneID:539475|LOC539475:XM_002686653:80_cdna UTR3_Alt 2 NULL GeneID:539475 4 GENE LOC539475 NULL hypothetical LOC539475 EMBV3_29148 AAAAACTGTTACTGCGAATCATTCCTGGCATATACCCGGGCCTGCCAGAGAGAGGGCATC Gene GeneID:534101|BMPER:NM_001077997:54_cdna UTR3_Alt 2 NULL GeneID:534101 4 GENE BMPER MGC142820 BMP binding endothelial regulator EMBV3_19290 GTTAGCGTGAGTGGTCGGTCTCGATCCCGGGAACCCGGTGGCCTTAGTCCTTCAGGTGAA Variant GeneID:538885|CBX5:XM_002687227:79_cdna 104^200 1 EMBV3_17671 GeneID:538885 5 GENE CBX5 NULL chromobox homolog 5 (HP1 alpha homolog, Drosophila) EMBV3_19129 TTCAAGGTCCCTGCTGTGCCTGTCCTCCCACTGGTGAGCATCTTTATGAATGTCTACTTG Gene GeneID:506868|LOC506868:XM_002683772:2_cdna Constitutive 0 NULL GeneID:506868 18 GENE LOC506868 NULL similar to cationic amino acid transporter 5 EMBV3_00570 CAGGAGGAAGTAATCCTGAAAACCGGGAAACAAGCCAACCGACGGACCATGCACTTTGCG Gene GeneID:537659|TTC28:XM_002694620:173_cdna UTR3_Alt 2 NULL GeneID:537659 17 GENE TTC28 NULL tetratricopeptide repeat domain 28 EMBV3_29596 CATCACTTTGCCAACCGCTAACTCCGCTGCAACACACGCTGATACACTCACCCGTGATTT Gene BVV0102_125096 + 0 NULL GK000015.2:34853736-34940404 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061059 1 XLOC_036912 Coding TCONS_00061059 XLOC_036912 NonCoding Coding - 15:34867270-34868714 - TSS45546 1200 1 TCONS_00061059_1 45 2 0.16978516978517 0 0 0 0 4.11431606008216e-06 0 5.34573262652905e-05 0 0 0 9.53826150535711e-06 0.00028903440819422 0 0 0 0 2.76704724990856e-05 0.00227909233620414 0 0 0 0 0 0.00029338121586733 0 0 0.000405258438725356 2.40129175037575e-05 7.68647827183497e-05 5.01020618439986e-06 XM_001788012.4 ZNF202 PREDICTED: Bos taurus zinc finger protein 202 (ZNF202), transcript 1e-39 168 100.00 0.0766666666666667 XM_005271659.1 ZNF202 PREDICTED: Homo sapiens zinc finger protein 202 (ZNF202), 5e-37 159 91.15 0.0933333333333333 0 noncoding CGTGTTCCGACCCGCCGGGCCCCGCGCGGCTCGGATCCGGCGGCACTGCCTCTGCCGGGAGTGGGTGGGGGAGAAGCCGGGGCAGGGGAGGAGCCGCCCGAGCTGTTGGAGCCCCACCGCCCTCCGCCCCCTCCTGAGGCCTGCAGAAACGCAGTTAGTTCGTACCTCCCGTTGCTTCCGCGCCTACGGCCCCCTTACTCCTGAAACCGAGAGAGGAGTGGTCGAGGCCCCTTCAGTTCCGGCGGCTTTTTCTCACCCCGCCTCTCACCTGGTTAGAGCAATCCTCCCGAAGGCTCCCTGTCCTGGCGAGCCCCATCACTTTGCCAACCGCTAACTCCGCTGCAACACACGCAGATACACTCACCCGTGATTTTATTACCCGTGATCATCGGAGGCTTTGGAGACCATCTGGTCTGTGCCTTTTCGGCTCACTGTGACCGACCCGAACCTCCTCTCAAGCCAGTGACTGCTGTCTTCATTTGCAACTTCCCTCCTCCAACCCCTAGCAGCCAGTTTTGGCACTTCTCGACACCACCTAGCGCTACCCTCAGTGGGAGTATCCGGGCCCGGCTTTTTGTCTGGTTTCACTAAAAGTTTGTTAGTTTGTCTGCCATGGATTTGCTTCGTTTTCTCGGAAAGTTAGCCAGGTTTTAATTTTTCTGGACACGGATGTTCTTTTCTCCTGGTCACTTTGATAACCCTGTCTGCCTTGGTCCTGGGGTGCTCCCACATCTTAGCACATCCAGGGTCTACTTAGAGGCTAGACTTACTACTGTTGCTTTCTCTCTGGCCACATTCTGCTGGTGACACCCAGGGCAGCCTCACTCAGAAGCCACAAGGAAAGCTAGTGGAGTCGCTCATCCCTCCAACTTCTCTTCCAATCTGCTCTATGGGCCTTGAGCCAGAAAGCCACTTAGAAAGTGTGGGGCAGCCATGGGAGGCTTGTTAGTGGGAGATATATGACAGGGGAGCTGTTAGGGTTTGCAGGCGTTTGTCTTGGGTAACTTTCTGCTTTTACTGTCCCGTTTAAGAAGGTTGGCAGGGGTGGAGGGAGGACGGGAACTTTTCTTCCTAGGACCAAACACCTGGGATTCCTGGTCTTTCCCCCTTTCTTCTCCTGCTGTACCACTTTTGCACTCTATATATACTATTTCAGTAGACAGTCATTTCAAGGGTATATCAAGGTTTTCTACTAAATGA TCONS_00061057 s 3' 245 TCONS_00061057 s 5' 0 EMBV3_19626 GCCTTGCCTGGGGCTGTTCAAGAGGTATTTCTATAACGGTACATCCATGGCCTGTGAGAC Gene GeneID:280996|AMBP:NM_173989:2_cdna Constitutive 0 NULL GeneID:280996 8 GENE AMBP MGC128013 alpha-1-microglobulin/bikunin precursor EMBV3_31749 CTGGGATTCGCCTACCTCAAGCCTCCTTTCTCCATCCGCTGTGTTGAAGTGTCGGATGAT Gene GeneID:512750|UBE3B:XM_002694536:480_cdna UTR3_Alt 2 NULL GeneID:512750 17 GENE UBE3B NULL ubiquitin protein ligase E3B EMBV3_29510 TGCTAGAAAACTGATTGGAGACCCTAACTTGGAATTTGTCGCCGTGTCTGCTCTTGCCCC Gene GeneID:515468|LOC515468:XM_002689660:64_cdna Constitutive 0 NULL GeneID:515468 8 GENE LOC515468 NULL similar to GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like protein TC4) (Androgen receptor-associated protein 24) EMBV3_37278 CCCTCTCCTCCTGCTCCGCTGAGACATGAAACTGTTTGAAATGGCTTTATGTCACAGAAG Gene GeneID:508373|RAB2A:NM_001075354:18_cdna Constitutive 1 NULL GeneID:508373 14 GENE RAB2A RAB2 RAB2A, member RAS oncogene family EMBV3_29718 GCCTTTAGAGTTGTCACCTCAAGCAAGTGTAAAATATAATAGCTAGTCTCTCCTCTTCAA Gene BVV0102_335876 + 0 NULL GK000024.2:62105527-62118138 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143981 1 XLOC_088401 NonCoding TCONS_00143981 XLOC_088401 NonCoding NonCoding - 24:62113986-62114765 - TSS108192 779 1 0 0 0 0 0 0 4.59185420063685e-06 7.4861441449577e-06 0.000265745194946833 1.01285350991992e-05 0 0 4.59008954198628e-06 0 0 0 0.00084761236317925 0.000468871883852132 0.000386509256395288 0 0 0 0 4.71069041417921e-05 0.000624101159450244 1.77881349139383e-05 0 0 0 0 0 NM_002035.2 KDSR Homo sapiens 3-ketodihydrosphingosine reductase (KDSR), mRNA. 1e-118 430 78.79 0.657252888318357 0 noncoding 0 0 0 0 NA NA NA NA ATTTTCTTAAATTCCATATTTCTTCCTTTTATTCATATATCCCACACTAGAGTCACACAAATCCAGAACATTATTTGAAACAAGGGCCGAAACATCTACTGTGAAAATAATACTTCCTAAAAAACGATAAAAATTAAGCCTTGTCAAGTGTTTAAGATGTAAGGTTAGGATAATATCACGAAAGAGACTGGTGTTTTGCTTAAATGTGTCTTTAAAAATGCACATTTCTAAGAAATACGTTTTCAAATCTGTAAAGCATGTTCCCCATTTATTTTTTGTCATGATTCAGAAATACAAGATATGAAAATTAGGTTACAATTCTGCCACAAAAGCTTCTAAAGTAGCAAACACAGGTTCTATTATATATCAAAATAGCCATATGCACTCATCAGTTTAAAAATGCCTTTAGAGTTGTCACCTCAAGCAAGTGTAAAATATAATAGCTAGTCTCTCCTCTTCAAAAAAACAAACCTGCCATCACTGCTCTGAACTAAACAAGATTTAGTCCAGAATATGGAAGATTATGGTTAGTAGGTATTTTTCAACGCTGAGTCACTAAGAAGTTAAGGAAATGAGAAAGATACAAAACATTTTAGGTCAAAAAGTATGAATAGCTTAAGTGTCCTCAAGTAAGTTAAGACATATTTAAATTGTAATATGATATAATAAAATTAAATATGTTGATACAATTCATTTTAAAAAAATTATTATGGGACTACCTTCTTCTGAAAAGACAAAGACATACAATTCTTTGAATCAAAGCAACTATTATGAAAAAG TCONS_00140779 . 3' 3374 TCONS_00140779 . 3' 4152 EMBV3_11107 ATCCTGGTGAAACACGTGGGCAGCAGGCTCTACAGTGTGTCCTACCTGCTCAAGGACAAG Gene GeneID:281165|FLNA:XM_002699728:152_cdna Constitutive 0 NULL GeneID:281165 X GENE FLNA NULL filamin A, alpha EMBV3_29469 CATGAGCGTAGGGTCGGTGAGCGGTTCACTTTTGGCTGCGAATAAGCTGCGTGGGGAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15256 CCAGACTGGTTTTAAGGAAGAGGCGACACAAGGCCTGTATATGCAGCTTCACACCTGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14897 TTCTCCATCTTCACATCTGAGCTGGTGAGGGTGTGGGCTCAAGCTGGAGCAGGGGTGAGG Gene GeneID:506201|EVL:XM_002696836:653_cdna UTR3_Alt 2 NULL GeneID:506201 21 GENE EVL NULL Enah/Vasp-like EMBV3_38997 TAGATGCAGAAACTGAGAGCTAAATGGGAGACTGAGCATTGTGTGTGGCCTGTGGACTGG Gene BVV0102_349426 + 0 NULL GK000018.2:7805807-7931849 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38556 GCCCAAACTATGCAAGCCGTTCCCTTCTCCAGCCTTCAAGGGTTACACCTTAGATGCATA Gene BVV0102_095714 - 1 EMBV3_35669 GK000010.2:8140313-8169621 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015838 1 XLOC_008568 NonCoding TCONS_00015838 XLOC_008568 NonCoding NonCoding - 10:8164438-8165629 - TSS11092 1191 3 TCONS_00015838_1 65 0.230898404701931 1 0 0 0 0 0 0 0 0 1.98647084948653e-05 0 3.45465695753797e-06 3.84412398519288e-06 0.000147110388682803 0 0 0 0.000665281559407115 0 0 0 0.000114724801326282 0 0 0 0 0 1.77467773259605e-05 0 0 0 0.000126201206030351 XM_005196397.1 NKTR PREDICTED: Bos taurus natural killer-tumor recognition sequence (NKTR), transcript variant X2, mRNA. 9e-09 66.2 76.84 0.0780856423173804 XR_242987.1 CD27-AS1 PREDICTED: Homo sapiens CD27 antisense RNA 1 (CD27-AS1), transcript 6e-11 73.4 77.89 0.0780856423173804 0 noncoding AAATCAGAGTAATGACAACCAAGACCGAAAGAGCTAGAGCTCTTTATGCACCTAAGGTGTAACCCTTGAAGGCTGGAGAAGGGAACGGCTTGCTTAGTTTGGGCTGAATTTCTACTTTAGAAAGCTGTCTGTCTTAATGTCTCAGAAAGGATTCATAAAAACTAAGCTTTTGTTTTGCTACCATGGACTTACTGGGGAATTCTGTTTCTAAAAAGGTTTGATCTTCAGTCTGCTCCTTTGTCTGGAAAATGGATGATGTGATCATTAAGGTCCCCTTGGCTCTAATGTACTATGATAACATAAAGTTCAATGAAACAGCCATCTCTGAGTGAATTGGTGGTTCTGTTTAGATTTTCCTGTTAATTGTAGATTTAGAAGGAAGTGTTTAAAGCCACATATATGTGTTTACTATTAAAAATAACAATGGTGTATCACACTTCTACAGAAGTGAGGCACTATGAGATTCACTACCCAGAACTGAAAATGTGTGTAAGCGTGCTCTCCCATTCCCCACTCTCGGTTCTCACAGCACCCTGCAAGCAGGACACGTATAACCATCCGTGTGTTACTCTGAGGCCCCACACTTCAACAAGGTGAAACAGCCTACGAGACCACAGCTCCTAAGCCGCAGACTGGAAGCTGACCTCAATCCATGGGCCCCAGCCAGATGGGGAACCAAACAGCTGACCTCCTTCCATGACTCTCTTCTGACCCACCTCTTCACCACTGCCTGACCTGTATCGTGGCCTGAGTGTCTGCTGACACTTGGGTCCATGTTGACTATTCCCGCTCTGGTGCTGAGAGGAAGCGAGGCTGGCCATCATGAGTTTTGTATGGCTGATGTAACAGATTCCACAAGCTTGGGAGCTAAAAACAACACGAATGTATTAACTTACAGTTCTGCAGGTCAGAAGTCTTAAAATGCATCTCAAAGTGTTGGCAGGGCTGTGTTCTTTTCTAAAGGCTCCAGAAGAGAATCTCGTTTTTTTGCTTTTTCTTTTTCTGGTTTCTGGAGGCTGCCCACGTTCTGGCTTCTTCAAGGCCAGCAGGGACCAGTCTTTCTCACAACCCATCACTCTGCCTCCCTCGTCCACATTTTAAAGGACTGTCTACTGAACTTAAGTTCAGTTGGTCAGCAACCTAATTCTATCTGCAAACGGAGTTCTCCCCTGCCAGGTAATACTGTGGTTC TCONS_00015840 s 3' 3993 TCONS_00015840 s 3' 3993 EMBV3_23664 AAGCCCTATGAATGTCAGCTCTGTGGAGAACACTTCACTCGTGCCTCTTCCCTTAGACGA Gene GeneID:100140788|LOC100140788:XR_084090:23_cdna Constitutive 0 NULL GeneID:100140788 27 PSEUDO LOC100140788 NULL similar to zinc finger protein 596 EMBV3_02616 CACTGTGGACTGCTGGTTCTGGTGTCCTGGGTGATGAGTGCTCTGAATTCCCTGTTACAA Gene GeneID:786202|LOC786202:XM_002688711:94_cdna Constitutive 0 NULL GeneID:786202 7 GENE LOC786202 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_01796 AACTCCTGCGTGGCTGGCACTAAATCTTCACCTGGGAGCTATGGGGGTGCCTTTGGAACT Gene GeneID:399560|MRPL12:NM_201606:39_cdna Constitutive 1 NULL GeneID:399560 19 GENE MRPL12 NULL mitochondrial ribosomal protein L12 EMBV3_20275 GGATAAGACACCGCATCCCCTCCAATTCCCCCTGCTGGAAAAGCTCAGAGGTCCTGTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33308 AGCACTCATACTCCAGTCTCCATGAATGGTTCTCAAAGTATGCCATGCACCTCAAGCCTC Gene GeneID:523477|SCML2:XM_002700369:10_cdna Constitutive 0 NULL GeneID:523477 X GENE SCML2 NULL sex comb on midleg-like 2 (Drosophila) EMBV3_43592 AACGGCCTCTACTACATCCATAGGAACAAGGGGAGCGGGACTACGGCCCCCCCATTGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37243 AGGTCTTCCCCACGGCCGCGCTCATGCCAGTGCCTGGTGTTCGAAGACGCGCCCAACGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30290 AGGCCTGTCTGCTGCACACCTGTCTGTTGCACACCTGTGTGCTATCAAGCCTCCCCCTGT Gene GeneID:100336639|LOC100336639:XM_002685140:119_cdna Constitutive 0 NULL GeneID:100336639 1 GENE LOC100336639 NULL keratin associated protein 10-2-like EMBV3_22925 AAAAAGAGAAAGTTAAAGTAGGTTTACACCATGTGCCTTGAAGTAGATAACAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_12773 GCCGACTGCACAATTACAATGGCCGACTCGGACTTATTGGCTTTGATGACTGGTAAAATG Gene GeneID:508918|SCP2:NM_001033990:31_cdna UTR3_Alt 4 NULL GeneID:508918 3 GENE SCP2 MGC127405 SCPX sterol carrier protein 2 EMBV3_34075 CACATCCCGGTCACGTAGTGGGGTTTTTTGTCTTTCTATTCCACAAAAGTTATTGTTCAG Gene GeneID:532989|DYRK1A:XM_002685155:131_cdna Constitutive 2 NULL GeneID:532989 1 GENE DYRK1A NULL dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A EMBV3_18771 CTGACATCCCCATAGGGTATTCTGGGCATGAAACTGGCATAGCAATATCTGTGGCTGCAG Gene GeneID:540602|NANS:NM_001046482:38_cdna Constitutive 3 NULL GeneID:540602 8 GENE NANS MGC137759 N-acetylneuraminic acid synthase EMBV3_11677 CACAGGCAGCTCAGGAAGCCGAGATCAATGCCAGAAAAGCCAAAAACTCTGTTACCAACC Gene GeneID:532572|LAMC1:XM_002694207:49_cdna UTR3_Alt 2 NULL GeneID:532572 16 GENE LAMC1 NULL laminin, gamma 1 (formerly LAMB2) EMBV3_23409 GTACCAAGAGACTGACACAGCCAATAATTTCTTACATGGCTCTTTTTGCAGCCACAGTTC Gene GeneID:512603|NAT1:NM_001075572:2_cdna UTR3_Alt 1 NULL GeneID:512603 27 GENE NAT1 NULL N-acetyltransferase 1 (arylamine N-acetyltransferase) EMBV3_16529 GGTGTAAAGGTCAAGTGTAAACCCTGAGGTCCCAGTAGGTGCATTATGAGGAGAGACAGG Gene BVT0102_442825 + 0 NULL GK000019.2:44064754-44068235 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094010 TCONS_00094011 1 XLOC_057324 Coding TCONS_00094010 XLOC_057324 Coding Coding DHX8 19:44035969-44066966 = TSS70405 6443 1 TCONS_00094010_6 1218 0.0277820890889337 23 0.792876500193573 7.29416188750129e-11 5.1104983858484e-11 4.11720997933685e-05 0.000303896632288424 3.08527073849937e-05 0.000153751582400715 0.000101031882648083 2.46706863565262e-06 2.80656752608794e-05 5.23580546674047e-07 5.369337347485e-07 1.43472028076083e-11 1.58632421431627e-11 0.000104792958843212 2.69637554967583e-11 0.0001759793422216 9.45305609896134e-11 0.00113977754706601 1.2742589814749e-05 6.40352201678979e-06 0.000224288169630092 5.62254710812612e-05 2.96245107409257e-11 5.23241913948358e-05 0.000186141901815562 3.67566863527359e-11 0.000122971847920838 4.0747935775695e-11 1.07688084608825e-05 2.98484063384935e-11 NM_001206091.1 DHX8 Bos taurus DEAH (Asp-Glu-Ala-His) box polypeptide 8 (DHX8), mRNA. 0.0 7634 99.98 0.657302498835946 XM_005257113.1 DHX8 PREDICTED: Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 8 (DHX8), transcript variant X1, mRNA. 0.0 5772 86.72 0.743908117336644 TCONS_00094010_6 sp|Q14562|DHX8_HUMAN DHX8_HUMAN ATP-dependent RNA helicase DHX8; 0.0 2334 97.85 0.989326765188834 5 coding 0 0 0 0 -1.37754030195811 0.0170340158447929 0.00470916936774452 0.939161877250575 GCTCGGAGGGCCGGCAGTAAGGGGGCCAAGTGGGAGTAGCTCCGAAGGACCGCGGTGAGGGGCCCCGGGAAGCCGTAGCCATGGCCGTGGCTGTGGCCATGGCGGGAGCCGTACCCGGGACAGAGCTAGGCCCCGCAGAAGAACTCGCCAAACTCGAGTATCTGTCTTTGGTGTCAAAGGTTTGCACCGAGCTGGATAATCACTTAGGTATCAACGACAAGGATTTGGCTGAATTTGTGATCAGTCTTGCTGAGAAAAATACCACCTTTGATACTTTCAAGGCTTCGCTGGTCAAAAATGGTGCAGAATTCACGGATTCACTCATTAGTAACTTGCTGCGTCTCATACAAACCATGCGGCCTCCAGCAAAGCCTTCTACCAGCAAAGATCCAGTTGTTAAGCCCAAAACTGAAAAAGAAAAGCTGAAGGAACTCTTCCCAGTCCTTTGCCAGCCAGACAACCCTTCTGTTCGGACCATGCTGGACGAGGATGACGTGAAAGTCGCTGTGGATGTCCTGAAAGAACTGGAGGCCTTGATGCCCAGTGCAGCAGGCCAGGAGAAGCACAGAGACACCGAGCACCGGGACAAGGCCAAGAAAAAGAAGCGCAGCCGGAGCCGAGAGCGAGACCGTGACCGCGAGCGAGAACGAGAACGTGATAGAGACCATAAGCGGAGACACCGGTCCCGCTCTCGATCGCGTTCCCGGACCCGGGACAGGAATAAGGGGAAGTCTAGATACCGGTCCAGGAGCAGAAGTCAGAGTCCCCCCAGAGATCGGAAAGACCGAGACAAGTATGGGGATCGGAATCTGGACAGATGGAGAGATAAGCACGTGGACCGCCCTCCCCCAGAAGAGCCCGCCATCGGGGACATTTACAACGGCAAGGTCACCAGCATTATGCAGTTTGGATGTTTTGTGCAGCTGGAGGGACTGAGGAAGCGGTGGGAAGGCCTGGTGCACATCTCTGAGCTCCGGCGGGAAGGCCGTGTGGCCAATGTGGCTGACGTGGTGAGCAAAGGCCAGAGGGTCAAGGTCAAAGTGCTGTCCTTCACTGGGACCAAAACCAGCTTGAGCATGAAGGATGTGGATCAAGAGACTGGAGAAGATCTAAACCCAAATCGACGGCGGAATCTTGTCGGGGAGACCAACGAGGAGACCTCTATGAGGAATCCGGACAGGCCCACCCACCTGTCCCTCGTCAGTGCCCCTGAAGTAGAGGATGACTCACTAGAGCGCAAGCGCCTTACTCGAATCTCTGACCCAGAGAAGTGGGAGATAAAGCAGATGATTGCTGCCAATGTCCTTTCCAAGGAAGAGTTCCCAGACTTCGATGAAGAGACTGGCATTCTCCCTAAAGTGGATGATGAAGAAGATGAGGACCTTGAGATTGAGCTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCACACCAAACAAAGCATGGACATGAGCCCTATCAAAATCGTTAAGAATCCAGATGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTTAAGCAAGCACAGCGGGAAGCTGAGATGGATTCTATTCCCATGGGACTCAACAAACATTGGGTTGATCCTCTGCCTGATGCGGAAGGCAGACAGATTGCTGCCAACATGAGGGGTATTGGGATGATGCCCAATGACATTCCCGAGTGGAAGAAGCATGCCTTTGGGGGCAACAAAGCTTCATATGGAAAAAAGACCCAGATGTCAATCATTGAACAAAGGGAGAGCCTCCCCATCTACAAGCTGAAGGAGCAGCTGGTCCAGGCTGTCCATGACAACCAGATCCTGATTGTTATTGGAGAGACTGGGTCTGGGAAGACCACGCAGATCACCCAGTACCTGGCGGAGGCGGGCTACACTTCCAGGGGCAAGATTGGATGTACCCAGCCTAGAAGAGTAGCGGCCATGTCTGTGGCCAAAAGAGTGTCAGAGGAGTTCGGTTGTTGCTTAGGCCAAGAGGTGGGCTACACCATTCGATTTGAGGACTGCACCAGCCCCGAAACAGTCATCAAGTACATGACAGATGGGATGTTGCTCCGAGAATGCCTGATCGACCCCGACCTCACTCAGTATGCAATCATCATGTTGGACGAGGCGCACGAGAGAACAATTCACACTGATGTGCTCTTTGGATTGCTGAAAAAGACGGTTCAGAAACGGCAGGACATGAAACTGATTGTCACCTCAGCCACGTTGGATGCTGTGAAGTTTTCTCAGTACTTCTATGAAGCTCCCATCTTTACCATCCCAGGTCGAACATACCCAGTGGAAATATTGTACACAAAGGAACCTGAAACCGATTATCTAGATGCTAGCTTGATCACGGTCATGCAGATCCACTTAACAGAACCACCAGGTGATATCCTGGTCTTCCTGACTGGTCAGGAAGAGATCGATACTGCTTGCGAGATCCTGTATGAAAGAATGAAATCCCTGGGACCTGATGTTCCAGAGCTGATTATCCTCCCAGTGTACTCTGCTCTCCCCAGTGAGATGCAGACCCGAATCTTTGACCCAGCTCCACCTGGCAGCAGAAAGGTCGTGATTGCCACCAACATTGCGGAGACATCGCTGACTATTGATGGCATTTACTATGTGGTGGACCCTGGATTCGTGAAGCAGAAGGTGTACAATTCTAAGACAGGGATTGACCAGCTCGTGGTGACTCCTATTTCTCAGGCTCAGGCAAAGCAACGAGCTGGCAGAGCTGGGAGAACAGGCCCAGGGAAGTGTTATAGGCTGTACACAGAACGTGCCTACCGAGATGAAATGCTGACCACCAACGTGCCAGAAATTCAGAGAACCAACTTAGCAAGCACAGTGCTCTCGCTCAAGGCCATGGGCATCAATGACCTGCTGTCCTTTGACTTCATGGATGCCCCACCAATGGAAACCTTGATCACAGCCATGGAGCAACTGTACACGCTGGGGGCCCTGGACGACGAGGGCCTGCTTACTCGCCTGGGCCGCAGGATGGCAGAGTTCCCTCTGGAGCCAATGCTGTGCAAAATGCTGATCATGTCTGTGCATCTGGGCTGCAGTGAGGAAATGCTGACCATTGTGTCCATGCTGTCTGTGCAGAACGTCTTCTACAGGCCCAAAGATAAACAAGCCCTTGCAGATCAGAAGAAGGCCAAATTCCACCAGACCGAAGGGGACCACCTCACCCTGCTGGCTGTGTACAACTCCTGGAAGAACAACAAGTTCTCCAACCCATGGTGCTATGAGAACTTTATCCAGGCTCGTTCTCTGCGCCGGGCCCAGGACATTCGCAAGCAGATGCTGGGCATAATGGACAGGCACAAGCTGGATGTGGTGTCCTGTGGTAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGATTCTTCCGGAACGCTGCTAAAAAAGACCCACAGGAGGGTTACCGGACACTGATCGACCAGCAAGTGGTCTACATCCATCCGTCCAGTGCTCTCTTCAACAGACAGCCCGAATGGGTGGTGTATCATGAGCTGGTGCTGACCACGAAGGAGTACATGCGTGAGGTCACCACCATCGACCCCCGGTGGCTTGTGGAGTTTGCGCCGGCCTTCTTCAAGGTGTCTGACCCGACCAAGCTAAGCAAGCAGAAGAAGCAGCAACGGCTGGAACCCTTGTACAACCGCTATGAGGAGCCCAATGCCTGGAGAATATCCCGAGCCTTCCGGCGGCGCTGAAAGGCAAGAATCTGTTGGCCTGACCTGCAGCCCTGGGCCAGGGCTCAGCCTTGCTCTTACTGATGAGAAGCTGGTCCTGAGGATACAGCTGTCTGGTGGCTGAATATCTCAACTGGGCATTTCTTAAACTTGACTCTCCTTCCTTCCCTGGTGGTAACAGAAACAGGGATTTACGCCTGGTGTGATCAGAGCCTCCAGGTCCCACCGCCCCAAGGTGGGGCCATCAGGGCTCACACCCGACATGCGGTACACACTGCATCATCCCCAAGTAAGGGGAAACTTCTGCAGCTCTCGGATGGGAAAGGGGAGCCACAAGCGTCTGCTTCGTGGACTCAGTGAGGGCCCTGAGGCCCTGGCTGGTACTCTGTAGAAGAGGGAGCCATGAAGCTCACCCAAAGTGTTGGCCTCCCCCTCCTTCATACTCCTGTCCCGCCCCTGTCCTTTTGCTTAACCTCCTGCAAATATTTATTTTCATAAAGAAACAAAAATGGTTCTCTGTAGCTGTTGCTTTTAGCTGAAAGTTTAGGCTATTGGCCTGGGCTGAAGGTGGGGAGATTTATTATCTGAGGCTTCAGTGGAGAGTCCCCTGAAACCAGAGCCTGAGGCTCTTTGGGCTGAAGGGTGATGCACACCCAGACCTCCAGTCTTATCTCTCAGCATCAGCACTGGTTCAGAGCTTCGAGGACAGCACTGTGATTAACCACATCCACTGTACAGGCATTCTGCTCTGGGAGCCTGAGTGATTACAGATGCCGCGTATTGAATACAGAAGGCTCTCCCTGGCTCCCTCTCCCGCCTGCCAAACTCACAGCATGCAGTGTGCCCTATTTCCTCTTGAAACACACAAGTAATGACACAACTTTCAGCTTATTTTTGGTTTTATTTTTATCCCCCTGATCTTTTTAACAGAGTTTTCTCTGGTCAAAGCCTCTCTCCTTCCACCCCAAAGTGAAAATCAATGTCACACCTCTCAGAGCCTGTTAGTGCTGCCCAGGACCTGTGCTCCTGGCCGCGTGCTTGGTGGTTTTCTCCTAGCATTTGGTTGGGGAATGGCCACCTCCCAGGGCCCTGCTCACATTTCCTGAGAAGCCTCTGGACTTGGAAGACCATCAGGCAGATGCTGCCAGGCCAGGCTGTGGAAGTTGGTCTGGTGGAGAAACCCCTGGCAGGTTGGGCACATCCTGTGTTATGGCCTGAGCTGCCTCCATTCTCTCTACACTTGAGAGTTCTGAAATGACGTAAATACTAGAACTACTCTACAGTGGTACGTTAGACACTAAAGGAGACTATACACCCTACTAGGATGTGAAGGAATATAGGCTGCTGTTGGGAAGCAGACCAGCCTAAGGACGCAATTCAGAAACAACCCAGCAGAGTCTGCTGACAGTAGATCCTTGCCCCTTCATTTAGCTGAGTGAGCTCTGGTGAGTCTCAGTGTGCCTCTCAGGAAACCTAGGCCAGCAGCTGAAGTCAGAGGATCTAAAGATCCTTTAAGGCCTTGTGGGGAGAAGGAGGAAACTGAAGCAGAAGCAGAGGCTGGCTACCCAGTCTTAATTCCAGGCCAGGTCTGTCTGATTTAGGAACAAACTCTGGGCTTGGCAGTCCACCTGTCCCAGCAGGGTGACCAACACTGACGGCATTGGCACCTCTGAAGTCATCACCGCCAAGAAAGGAGGTTTGGATTTTAAGCTGAATTTGAAAAGGGGATGTTTAGCAGGCCAAGGCTGACAGACAGCGGGCTGGTCATCTTTCTGGGTAAGGTGAGCAAAAAGGACCCAAACTCTGTGGGTGTTCTTGAACATCTCCCCAAAGAGCTGGGGTCACCGTCTCTGCTCTGACAACAAGGCAGGGGTCTGACCTTTTACTGTCCATGAGGAAACAGCATGTAGGCAGCATTGCTGAGCCTTCCTCGAGGGAACAGTGCTCCTGGCCAGATTGGGCAGGAGGACCCGCCTGCTGCTCCTACACAATGGGGCCCTTGTTTCTCTTCCCTGAAGCAATGTTTCCCGAGATTGAGTGACAGCCCAGAAGAGGATGTGGGTCTCGTGCAAGGAGCTGCAATCTTCTTGCTGTTTATCCCACCCCTGCGGGAGCTAGCTCCAGAGTTTCCTGCCCCTGCACTTGTGCTGAGTCTGTGCCTGTCTGTGTGTCAGGGGACCATCCTATGGGCCGTGTCAGCTCTCCTGTTGGGTCAGGTGCCTTGGTCCAGGGTTTCCCTTCATCCAGTCTAGAGCGTGGTTCGGTTTTGGCTGTCATTCCTTCAGCCAGAGAATTCTCTCTCGTGGTCGTGGTTGTGGTCTGGTAGCCATCTCCTCAGAGCAGTGCCCTCCATGTATAAGGATTTGAACCGAGTTGTGAGGAGAGGCTTGTTAGCATTCCAGAGGACAGAGGTCACATGTCTCGGCCCGTGAAGACCTTCCCAGGACCCTGTCTCTCCTCATAATGCACCTACTGGGACCTCAGGGTTTACACTTGACCTTTACACCTCTTCTCACCGTGACAGCCTAGGTTTCATGTACAATTACAGGCTTCCCTGGTGGCTCAGACAGTAAAGAATCTGCCAGCAATGCAGGAGACCCAGGTTTGATCCTGGGTCAGGAAGATCCCCTGGAGGAGGAAATGGCAACCCATTCCAGCATTCTTGCCTTGGGATATCCCATGGACAGAGGAGCCTGGTGGGCTATAGTCCACGGAGTCACAAAGAAT EMBV3_08136 CCACCCCCACTCCTTTAGCTGCTACTGCCTCCTCCAGGCAATGTGAAGATAGAAGGCCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13957 ATGATCCTGAAGAAGACAGTTTGAATCTAGTGGGTCCCATATCCGTGTCCTTTAGCCCAG Variant GeneID:515771|B4GALT3:NM_001015609:281_cdna 230^504 1 EMBV3_09477 GeneID:515771 3 GENE B4GALT3 MGC143068 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 EMBV3_01154 TTTCACAAGTTCTACAAAAGAGGTTTACCAGTCACCACCATGGCTCTTGCCACCGTGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17437 AGAAGTCGTTCGAGTCCTCTTTGGGAAGGGGGTGCTGTAGCACCTATGACTGGAACTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43607 GTTTTACGGAGAACTTGCCGAGGACAAAGATGAGATCCGAATACCAGATGTCGACCCTGC Gene GeneID:513420|BTBD3:XM_002692033:28_cdna UTR3_Alt 2 NULL GeneID:513420 13 GENE BTBD3 NULL BTB (POZ) domain containing 3 EMBV3_36949 TAGCAGATTCCTCAGCCTGGCTTTTGTGGTCTTTGAGGAGATGAATATACTGCCCCAGGG Gene BVT0102_186011 + 0 NULL GK000004.2:17143663-17177734 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183296 1 XLOC_111124 NonCoding TCONS_00183296 XLOC_111124 NonCoding NonCoding - 4:17174001-17177092 - TSS136824 1335 2 TCONS_00183296_3 126 0.180524344569288 2 0.568608414239482 0.000315938725325035 2.25806995859182e-05 4.85227607439567e-05 0 0.000270501328053306 0.000417320786403758 2.62099783786201e-05 0.000110762506647102 2.95511491166063e-05 0.000434564627664128 1.02884815774969e-05 0 2.14927589354793e-06 5.87264959701143e-07 3.6750530166305e-06 0 0 0 5.37148775952238e-05 0.000441721255889929 0.000358147903467664 0 0 0 6.04386245519904e-05 0.00017943513651568 0.000752692276117667 7.1948891145658e-06 7.27282054796122e-06 0 NM_174197.2 TLR2 Bos taurus toll-like receptor 2 (TLR2), mRNA. 9e-79 298 85.61 0.191011235955056 0 noncoding 0 0 0 0 -0.0516485725487269 0.679318400862379 0.0411229002738553 0.560545981406032 GGGCTGGAGAGAGAGGAAAGAGGTCCCACCTGCATGAAACGGCCAATATGACCCAGACCTCCCCCAGATACTGCAGTGGAGGCAGCAGGGTGGACCCTTGGCTTACAGGGGAGAATAGCAGTTTTGCACATGGACACAAAACCCTGAATATTTGAAGGACTGAAGCTGAAGTTCCAATGCTTTGGCCACCTGATGCGAAGAGGTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGACTGAGGGCAAAAGGAGAAGAGGGTGGCAGAAGAAGAGATGGTTGGGTAGCATCACGAACCCAGTGGACATGAGTTTGAGCAGACTCTAGGAGATAGTGAAAGACAGGGAAGCCTGGCTGCTGCAGTCCATGGGGTTGCAAAGAGTTGGACACGACCGAACAACAACCCAAAAGCGACTCAAATAGGCCCATCCCAGTCAGAGACTCGAGGGCTAGCGTCTCGCCGTCCCTCCCACGTCCCAGGTGATGCGCTCAGAGTCCACACAGGTGCACAGAAGCCAGTCTGCCGGATGCGTGGGCCCGCGTTGGGGGTGGAGTCCGGGACCGCCCCACCGCAGTTCTGAGAGCTCAGCTAGGCCGGGAGGCGTCCTGAGTCCCGGCCGGCTTCTCCAAGGGCACAGAAACGCTGGGGCTCCCCGCCCCGGGGTGCGCGGCCCCAGCAGCAGCCCCAGCGGAACAGCCTGGAAGCCGGGCTGCGGGCAGACGGCGTCCAGCCCTCGGCGCATGCGCACAGTGGGTCCCGCGCTGCTCGCCTCTGGGCCAGACAAGCATGGCCGGCCATCGCTTTTGTTAGAATCTCATTTAGCAGATTCCTCAGCCTGGCTTTTGTGGTCTTTGAGGAGATGAATATACTGCCCCAGGGGCCCCACCTCGCTACCCCAACCTGCACATAAGCAGGAAGGCTCGCTGGACCCCTCAGACCCCTCTCCTCTCTAGGGCTGTGCGTTTGCTGCTCACTGAACCCGGGACGCCCCGTCTCCATGCCCTCAGCAGCCTTCACGATGCTAGACCCCAGCTCTCCCACTGGGACGGCTCAAAGCGTAGCCCTCAGTTTTCCTTTGAGGAATTGCTGCTCCTCTCTCGCCAGGGCCTCCCATCTCAGAAAACCTGTGCCTGAGTCTACCACCGGGTGTTGGCCACCCCACAAGACGAAGTCTTTTTATCTCCCTAAACCGTCTCCTCTCCCCGGTAATCGGCCCTCTGGAGTCACCTTAAATAACTCAGATTTGGCAACATTGACAGGCATGCATGAATGAGAAAAGCAGAAAGTTCAAAGAACACTTTATTATTGACACCTAATTCAATTCAAATTCCCTT TCONS_00180943 r 5' 0 TCONS_00180943 r 5' 0 EMBV3_20946 CCTTCCAGCTCCTGGACCTCATCCTGGCCGATATTCCAGGCCTACCTGGCCTTCCAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16320 GATCCGGAGTGTCCCGTCTGCCACATCACAGCCACGCAAGCCATCCGAATATTTTCCTAA Gene GeneID:618154|MEX3A:XM_002686010:391_cdna Constitutive 0 NULL GeneID:618154 3 GENE MEX3A NULL mex-3 homolog A (C. elegans) EMBV3_05786 TTGTTGCAGAGCACAGGCTCCAGGTGTACAGGCTCAGTAGTTGTGGTACACAGGCTTAGT Gene BVV0102_356844 + 0 NULL GK000029.2:44585599-44625063 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30111 CAGTGGCCTGATGAGGGTATTCGGTTAAAAGCTGGGAGGAACAGCTGGAAGGACTGGAGT Gene GeneID:514244|LOC514244:XM_002691050:453_cdna UTR3_Alt 2 NULL GeneID:514244 10 GENE LOC514244 NULL similar to rCG20598 EMBV3_17819 GCCGACACCATTGGCGTGTCTCTTATTAAGGTAGCAAGAACCAGGCTCATGGACAGCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04390 TCCATCATGCAGGCCAGCTTCACATTCACTCTCCCATTCTGCAGCTCCAACCACATCAAC Gene GeneID:782152|LOC782152:XM_002686601:84_cdna Constitutive 0 NULL GeneID:782152 3 GENE LOC782152 NULL similar to olfactory receptor Olr1347 EMBV3_35047 GGCTGCACACCCAGGTCTCACTCTGATTATGGAGGTAGCACTCTTCACTAGCCAATTCAA Gene BVT0102_122803 - 1 EMBV3_29268 GK000007.2:38795858-38923822 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08666 AACATCTAGTATGCAGGTCTGTGCTGAAGAGCCAACCCTGGGCATTTCTCTGGTCACTAC Gene BVT0101_023984 + 1 EMBV3_10431 GK000002.2:122980400-123070707 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103689 TCONS_00103690 1 XLOC_062187 Coding TCONS_00103690 XLOC_062187 Coding Coding NKAIN1 2:122969520-122981656 j TSS76958 2444 1 TCONS_00103690_2 163 0.160801963993453 7 0.79917593737124 5.44238068891554e-05 0.000501596749000741 7.95123154631724e-05 0 5.67028779701232e-11 3.5583210571574e-11 0 2.68037654574201e-05 7.6028480312155e-11 3.59066371237421e-11 2.24299158853225e-06 0 3.46272014766527e-11 4.49589286622081e-11 8.31843149886952e-11 0.00353342164905408 0.00143333478843361 0.00075742977253143 4.99468207581855e-05 2.14554798412803e-05 3.64537636402253e-11 0.00051314896622654 7.21716957622855e-05 0.00062420639655949 6.14408180744027e-11 0.000288274188525595 7.19191376672773e-05 0.000208293199350604 3.92071428639279e-05 2.41591904481507e-05 XM_002685664.3 NKAIN1 PREDICTED: Bos taurus Na+/K+ transporting ATPase interacting 1 (NKAIN1), mRNA. 0.0 2331 100.00 0.52823240589198 NM_024522.2 NKAIN1 Homo sapiens Na+/K+ transporting ATPase interacting 1 (NKAIN1), 0.0 1700 76.13 0.960310965630115 TCONS_00103690_2 sp|Q9D035|NKAI1_MOUSE NKAI1_MOUSE Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1; 9e-118 336 100.00 0.993865030674847 1 coding 0 0 1 1 -0.0281257672667535 0.806845501692631 0.00404894732648155 0.933699542475176 GTGCCAGGCATGGCTCTCGCCGCTGGAAATGCAGCAGTGAACATCCCCACTCTCCTGGAATTTGCTGTCTAATGCAGGAGATGGTAAATAATGAGTGGCTGCACTGGAGCGGCAGATCTTTGACTTCCTGGGCTACCAGTGGGCTCCGATCCTAGCCAACTTCCTGCACATCATGGCAGTTATCCTGGGCATCTTTGGCACCGTGCAGTACCGCTCCCGGTACCTCATTCTGTATGCAGCCTGGCTGGTGCTCTGGGTTGGCTGGAATGCTTTTATCATCTGCTTCTATTTGGAGGTTGGACAGCTGTCCCAGGACCGGGACTTCATCATGACCTTCAACACATCCCTGCACCGCTCCTGGTGGATGGAGAACGGGCCAGGCTGCCTGGTGACACCTGTCCTGAACTCCCGCCTGGCCCTGGAGGACCACCATGTCATCTCAGTCACCGGCTGCCTGCTCGACTACCCCTACATTGAAGCACTTAGCAGTGCCCTGCAGATCTTCTTGGCTCTGTTTGGCTTCGTGTTCGCCTGCTACGTGAGCAAAGTATTCCTGGAAGAGGAGGACAGCTTCGATTTCATCGGCGGTTTTGACTCCTACGGATACCAGGCGCCCCAGAAGACGTCGCATTTACAACTGCAGCCTCTGTACACGTCTGGGTAGCGTTTGCCCCACGCCCACCCCCGCGGCTAGACTGACCGCCGCTGCCGCGAGCTCTGGCCAAAATGGCAGGCGCGCCCCCTGGCGGCTCCCTGACTGACTGCAGCCTGAGCCGGCTGGATCTGGGTCTGAAGCGGACTTGGACTTGGCCCTTAGCAGCCTGGACTTGAGGGGCGGGGCGGGGAGCGGGGTGTGGCGGGGAGAATCGCGGGGTTTGTATTTTTGTTTTTTTAATCTCAGCCTTGACGTGTGCGGGAGACTCCCCCGCCCTTCTCCAGCCTCCCCTTCCTCCCTTCTTCCCCCAGCATCCTGTCCCCTGTCCAGAGGGAAAGGGCAGGAGAGACACACACACCCCATCTCGCCACATTTATTCACCAGCCCTGAGGAAAGTTCCCCCGAACCATGAAGAGGAGGAGTCCTGGGTTCTAATCTCAGCTCCATCACTAACTCTGTGTGACATCTGGCAAAGCCCTTGTCTTCTCTGGGCCTTAGCTTCTCACCTCAAATAATTAAAATAATCCCTTAGTAAATGGAGCTCTTCCTAGCCTTTTCATTTGACTCTCAATTCTCTGGACTATACTGGGGCTTTGCTATAATCCCCATTTTGCAGATATGGAAACTGAGTCCCAGAGATGTAAAGCGATTTGCTTGAGGTCACACAGCTGGGCTTTTGGTGGAGGCAGGCCTTGAATACAGTATATCATCTGTAGTTTCGGACTCCAAAACCCAGTGTCCAGTTTCTGAATTCCGTTTCCAAGCCCCCTTCCAACTTGGACACTCTAGAACCCATATGGCATACACCACTCTCACATACCACCACCCCCACTTGCCAACGCCTCTCTTAAAGCAATATACCCGTTCTCTTGCTGGACACGGGATGGACAGATCCCAGAGCCCTGAATTCAGCCTGACCGACAGGGAAGCCTTCTTAGACTCGGCCTCTGCCCACCCTTGGCAAAGCTTTCGAGCTTTCTCTAGCAAAGGGGGGACACAACCCCATTGCCCCAGTCCCTCCCAGGTCCCTGAGGCTGCTGCACCCATGACCCCTCACCCCCTCAGCAACTTTGCCAACCTCTAAGGACACCATCCACTTCATCTGGTGAAAGACCAGTGGTTCCAGCATGGAAAAGGGCTCATCTGTGCTGCCCAGCCACCAGTGTTGAAAGATCACCAGCATTCATGATCGTTTCGGTGTCCAGAAGCAACTTCTAACAACCCCAGAAGTTGTTCCAGAGAGGCAGAATGGGGGAGGGATGCCGTAGGGGAGATGGGTCTGGAGGGCCAGCACCCTTCCTTAAGAGCAAGTCGACGTAAGGGCTCAGTCTCCTCACCTCCCTCCTCAGACACCTCTGAGGACCCTGCATCCCGTGTGCTGGCTGGTGAATCCAAGGGCAGGAAGATTGGGCCTCGGCTTCCAGTTTGTGAAACAGGAGTGGCTCCGGCTTAGGAAGGCGGGTGGGAGGCCCAGGGGAACCAGGTGGAAGTACAGACGGTCGTACACCTGAGCCCCTCCATGACGACCATTCCTCACTCTCCACGCGCTGATCTGCCATCCCCTCCTGTCTAAGGCCAAAATATCCTGAACTCGGATCCCACCCCAACATCTAGTATGCAGGTCTGTGCTGAAGAGCCAACCCTGGGCATTTCTCTGGTCACTACGGGACCTGAGATCAGCCCTGGCCAGCTACAGGTGCAGCTCAAGAGTGTGATGGTTCCCTCCGGCCTGGCTGCTGCTCTGCCCCTGGGCCAACTCCTGCCTCCAGCCCTCTCCTCCCACCCCCAG EMBV3_04594 TCGTCAAGCCTGCCTTTGAGGAATTCTGCTTGCCAACAAAGAAGTATGCTGACGTGATCA Gene GeneID:541028|UCK2:XM_002685829:49_cdna Constitutive 0 NULL GeneID:541028 3 GENE UCK2 NULL uridine-cytidine kinase 2 EMBV3_27456 TTGGGGTGTGGTGGGAGGGAAATGGACAAGTGGCAAGACAAGCTCTCTACCTAGAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28067 CAAATTGAGTGGCCTGTCCTTCAAGAGAAATCGGAAGGAGGGTGGGGGTGATTCGTCTGC Gene GeneID:782264|LOC782264:XR_083810:117_cdna Constitutive 0 NULL GeneID:782264 12 PSEUDO LOC782264 NULL similar to MARCKS-related protein (MARCKS-like protein 1) (Macrophage myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) (Brain protein F52) EMBV3_24297 AATGCAGTTCTCCACTGTCCATCTACACTGCCTGCTAGACTCAGATCACCTGCCTGCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36441 CTGTGGTTCCAACATCCTCAACCACTTCTTCTGTGAAATCCCACCACTCTTAGCCCTCTC Gene GeneID:532411|LOC532411:XM_002693754:525_cdna Constitutive 0 NULL GeneID:532411 15 GENE LOC532411 NULL similar to olfactory receptor MOR180-1 EMBV3_25571 TAATGTTTTTAATTCCCTTTTAACCCAGTATACTAGGTCATTCACGAGGGATCTTGGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25578 ACTCCTGGTCTTTAGGTCAATCTGCTCATCCCCTCATTTTGGCTTCTCCACCCAGATCCT Gene GeneID:516413|KLF17:XM_002686512:679_cdna Constitutive 0 NULL GeneID:516413 3 GENE KLF17 NULL Kruppel-like factor 17 EMBV3_24163 CCTGACTCTGACTGGAGTTCAAGGAGTTCCAGCAATAAGGAATGGACGCTGTTCCTGCAT Gene GeneID:513990|CXCL9:NM_001113172:59_cdna Constitutive 0 NULL GeneID:513990 6 GENE CXCL9 NULL chemokine (C-X-C motif) ligand 9 EMBV3_38188 AAGGGCCATTGATCACTTTTTCTGTGAAGTCCCCGCCATGTTGGTGTTGTCCTGTGTGGA Gene GeneID:788011|LOC788011:XM_002689113:64_cdna Constitutive 0 NULL GeneID:788011 7 GENE LOC788011 NULL similar to olfactory receptor Olr1566 EMBV3_16137 TGAAAAGATTCCCAAACGGGGAAGAGCCCTGGGAAGAAAGACCAGGTGCTGATGGGTGCC Gene GeneID:510490|ZNF500:NM_001105353:126_cdna Constitutive 0 NULL GeneID:510490 25 GENE ZNF500 MGC166027 zinc finger protein 500 EMBV3_23764 AACTGCGTGATGATGCTGGGCTCTGGGAAGTGGAATGACGCCTTCTGTGGAAGCGAACTT Gene GeneID:407106|FCER2:XM_002688859:211_cdna Constitutive 0 NULL GeneID:407106 7 GENE FCER2 CD23 Fc fragment of IgE, low affinity II, receptor for (CD23) EMBV3_04763 TCCTGGGGAATGCTGGGAAGTTGCAAGTGAGGTCATGGAATTAGAAAGGTTAAGGTTAGC Gene BVT0102_011023 + 0 NULL GK000019.2:18958900-19020656 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095477 TCONS_00095479 TCONS_00095480 TCONS_00095478 1 XLOC_057722 Coding TCONS_00095477 XLOC_057722 Coding Coding - 19:18969370-19016754 - TSS71169 4026 1 TCONS_00095477_3 1027 22 0.915497119219973 0.00410927743624946 0.00408766440978657 0.00328846095023692 0.0017710827505983 0.00294345136936576 0.00141154175436728 0.00153012285655051 0.000746583143550081 0.00332799208707318 0.000550683072759852 1.37000476173612e-05 1.28040399234961e-05 0.000701449773762056 0.00029273610609008 0.000692775918453801 0.00596865470264235 2.90037611960541e-05 0.00257512860113887 0.00323208976973461 0.0059331350522206 0.00167612452594512 0.00052327815602651 0.00133117815898883 0.0025427239997422 0.00563260649105221 0.00591804029512505 0.00279150717017592 0.00013904330793653 0.000141148218382989 0.000567129811646528 NM_001042492.2 NF1 Homo sapiens neurofibromin 1 (NF1), transcript variant 1, mRNA. 0.0 5615 92.55 0.946348733233979 TCONS_00095477_3 sp|P21359|NF1_HUMAN NF1_HUMAN Neurofibromin; 0.0 2106 99.12 0.999026290165531 0 coding 0 0 0 0 -0.170858700940203 0.201649524514936 0.0110004219394378 0.866361709132077 CAGGTTGGTTCTACTGCTGTTCAAGTAACCTCTGCAGAGCGAACAAAAGTCCTGGGGCAATCAGTCTTTCTAAATGATATCTATTATGCCTCAGAAATTGAAGAGATCTGCCTGGTGGACGAGAACCAGTTCACCTTAACTATTGCAAACCAGGGCACACCGCTCACCTTCATGCACCAGGAGTGTGATGCCATTGTTCAGTCTATCATTCACATCCGGACACGTTGGGAGCTGTCGCAACCAGACTCCATTCCCCAGCACACCAAGATTCGGCCAAAAGACGTCCCTGGGACACTACTCAATATTGCATTACTTAATTTAGGCAGTTCAGACCCTAGTTTACGGTCAGCTGCCTATAATCTTCTGTGTGCCTTAACTTGTACCTTTAATTTAAAAATTGAGGGCCAGTTACTAGAGACGTCAGGTTTATGTATCCCAGCCAACAACACCCTCTTTATTGTCTCTATTAGTAAGACCCTGGCAGCCAATGAGCCACACCTCACCTTAGAATTTTTGGAAGAGTGTATTTCTGGATTTAGCAAATCTAGTATTGAATTGAAACACCTTTGTTTGGAGTACATGACTCCATGGCTATCAAATCTAGTACGTTTTTGTAAGCACAACGATGATGCCAAGCGACAGAGAGTTACTGCAATTCTTGATAAGCTGATAACAATGACCATAAACGAGAAACAGATGTATCCATCTATTCAAGCAAAAATATGGGGGAGCCTTGGGCAGATTACAGACCTCCTTGATGTTGTACTAGACAGTTTCATCAAAACCAGTGCAACGGGTGGCTTAGGATCAATAAAGGCTGAGGTGATGGCAGATACTGCTGTAGCTTTGGCTTCTGGAAATGTGAAATTGGTTTCAAGCAAGGTTATTGGAAGGATGTGCAAAATAATTGACAAGACATGCCTATCTCCAACTCCTACTTTAGAGCAACATCTTATGTGGGATGACATTGCCATTCTGGCTCGCTACATGCTAATGCTGTCCTTCAACAATTCCCTGGACGTGGCAGCTCATCTCCCCTACCTCTTCCACGTTGTTACTTTCTTAGTAGCAACAGGGCCACTCTCCCTGAGAGCTTCCACACATGGATTGGTCATTAACATCATTCACTCTCTGTGTACTTGTTCACAGCTTCATTTTAGTGAAGAGACCAAGCAAGTTTTGAGACTCAGCTTGACAGAGTTCTCATTACCGAAATTTTACCTGCTATTTGGCATTAGCAAAGTCAAGTCAGCTGCTGTCATTGCCTTCCGCTCCAGCTACCGGGACAGGTCATTCTCTCCTGGCTCCTATGAGAGGGAGACTTTTGCTTTGACATCCTTGGAGACAGTCACAGAGGCTTTGTTGGAGATCATGGAGGCATGTATGAGAGATATTCCAACATGCAAGTGGCTGGACCAATGGACAGAACTAGCACAAAGATTTGCATTCCAGTATAACCCGTCCCTGCAACCGAGAGCTCTTGTTGTCTTTGGCTGTATTAGCAAACGAGTGTCTCATGGGCAGATAAAGCAGATTATCCGTATCCTCAGCAAGGCTCTTGAGAGTTGCTTAAAAGGACCTGATACTTACAACAGTCAAGTTCTGATAGAAGCTACAGTAATAGCACTAACCAAATTACAACCACTTCTTAATAAGGTATCCCCTCTGCACAAAGCCCTCTTTTGGGTTGCTGTAGCCGTGCTACAGCTCGATGAGGTCAACTTGTATTCAGCAGGCACTGCACTTCTGGAACAAAACCTGCACACCTTAGACAGTCTCAGGATATTCAACGACAAGAGTCCAGAGGAAGTGTTCATGGCAATCCGGAACCCTCTGGAATGGCACTGCAAACAAATGGATCATTTTGTTGGACTCAATTTCAACTCTAACTTTAACTTCGCACTGGTTGGACACCTCTTAAAAGGATACAGGCATCCTTCACCTGCCATTGTTGCAAGAACAGTCAGAATTTTGCATACACTACTAGCTCTGGTTAATAAACACAGAAATTGTGACAAATTTGAGGTGAATACACAGAGCGTGGCTTACTTGGCAGCTTTACTTACAGTGTCTGAGGAAGTTCGAAGTCGCTGTAGCCTAAAACATAGAAAGTCTCTGCTTCTTACTGATATTTCAATGGAAAATGTTCCTATGGATACATATCCCATTCATCATGGTGACCCTAGCTATAGGACACTAAAGGAGCATCAGCCGTGGTCATCTCCCAAAGCTTCTGAAGGGTACCTTGCAGCCAGCTATCCACCTGCGGGCCAGACCAGTCCCCGAGCCAGGAAATCTATGAGCTTGGACATGGGGCAGCCTTCTCAGGCCAACACGAAGAAATTGCTTGGAACAAGGAAAAGTTTTGATCACTTGATATCAGACACAAAGGCTCCTAAAAGGCAAGAAATGGAATCAGGGATCACAACACCCCCCAAAATGAGGAGAGTAGCAGAAACTGATTATGAAATGGAAACCCAAAGGATTTCCTCATCACAGCAGCACCCACATTTACGCAAAGTTTCAGTGTCTGAATCAAATGTTCTTTTAGATGAAGAAGTACTTACTGATCCGAAGATCCAAGCACTTCTTCTTACTGTTCTGGCTACACTGGTGAAATACACCACAGATGAGTTTGATCAACGAATTCTTTATGAATACTTAGCAGAAGCCAGTGTTGTTTTCCCCAAAGTTTTTCCTGTTGTGCACAATTTGTTGGACTCTAAGATCAACACCCTGTTGTCATTGTGCCAAGATCCAAATTTGTTAAATCCGATCCATGGAATTGTGCAAAGTGTGGTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGTTTTGGTTTTAATGGCTTATGGAGGTTTGCAGGACCCTTTTCAAAGCAAACACAAATCCCAGACTATGCTGAGCTAATTGTTAAGTTTCTTGATGCCTTGATTGACACGTATTTGCCTGGAATTGATGAAGAAACCAGTGAGGAGTCCCTCCTGACACCCACATCTCCTTATCCTCCTGCAGTGCAGAGCCAGCTTAGTATTACTGCTAACCTTAACCTTTCTAATTCCATGACCTCACTTGCAACTTCCCAGCATTCCCCAGGAATCGACAAGGAGAATGTTGAACTCTCCCCCACCACTGGGCACTGTAACAGTGGACGAACTCGCCATGGATCCGCAAGCCAGGTGCAGAAGCAGAGAAGTGCTGGCAGTTTCAAACGTAATAGCATTAAGAAGATCGTGTGAAGCTTTCTTTCTTTCCTTTTTCAAACAGACTTAACTGACACGGGCTCTTCACTAGTGACCCCTCACCACCGTGCTGTGATGCTGCACTTCATGTTTCTAATGAGCCCATCCAGTCTACCATGTTGCCAGATGATCAACTCTTGGAAGCGTTGCCTAAATTTAATGCTGCTTTTTTCTTTAACTTTTTTTTTTACTTTCGGTGTGTCTGGTTTAAGCAAGTGTTCAGAACAGCTGCAAAGAGAGTGGGCAGTCAGGACACTTGACCTGAGAACATCCCAATTGTGAGAGGATGAATTCTTGAATACTGCTACTACTGGCCAGCTATGAAAGCCATTTGCACAGAGCTCTGCCTTCTATGTTTTCCCCTTCTTCAACATACAAAGTAAAGTGTTAGTCTTATTTACACACTTTTCGAGATAGAAGTTTATGGGAGAAATAATATTATAACCCCAGTATGTTTAATCTGACTTTTAGCTGTGGACTTTTTTTTACCTTACAAAACTGAAGAACCATAGAGGTCAAGCCTCAGTGACTTCACACCATAAAGCCACAGGCAAGGCCCAAACTCTGGCAGTTCCCTTGTCTACAGCCTCGTTAATATTGTAAGCAGTTGTATGCCAGCAGGAGAAATACTGCCCAACAGACAAAATCCACCATTGTAGAGGAGAACTGTAGAAATCCATTTCAGATCACTGTTGTTCCCGTCCCATTCTCCTCCCTGTGTATGTACTCCTCCCCCTTTTTTTAAGTAAAATGTAAATTCAATCTGCT TCONS_00095472 s 5' 10146 TCONS_00095490 TCONS_00095482 TCONS_00095483 TCONS_00095484 TCONS_00095485 TCONS_00095486 TCONS_00095487 TCONS_00095488 TCONS_00095489 TCONS_00095491 TCONS_00095492 s 3' 1203 EMBV3_30507 CGGCGTCTGTGTCCCTGGCAACAGACGACAGCCAGTCGGTGAAGAAATAGAAATGGTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20187 CAAGGACTCTTCAGGCGAGCCATCTATGATGCATTTGAACGCTTCCTCCATAAATACGCC Gene GeneID:530484|MGC165715:NM_001102129:32_cdna Constitutive 1 NULL GeneID:530484 17 GENE MGC165715 NULL hypothetical LOC530484 EMBV3_00170 ATCTGGATTTTAACTTCGAACCCGGCTCCGGCTCGCATTTCGAGTTCCCGGACTACTGCA Gene GeneID:768313|SOX4:NM_001078128:170_cdna Constitutive 0 NULL GeneID:768313 23 GENE SOX4 MGC142625 SRY (sex determining region Y)-box 4 EMBV3_39271 TGCCCCTCTTCTCTGGTGTATCGTTGCTAGAGTGTGACTACCCGACTGAAGGCTGCATTT Gene BVT0102_188128 + 0 NULL GK000009.2:31896326-32092886 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236935 TCONS_00236936 1 XLOC_144609 NonCoding TCONS_00236935 XLOC_144609 NonCoding NonCoding - 9:31983014-31986722 - TSS177254 3123 3 TCONS_00236935_4 74 0.146013448607109 3 0.158349069328298 0.000364476530484034 3.33601669765783e-06 0.000318631955704975 0.000206154382001821 5.28337769875785e-05 2.23633494283246e-05 0.000256822873041963 0.000362751715726355 6.98236875783344e-05 6.63328416222165e-07 0 2.7442356309001e-06 1.97860924093263e-05 6.85858548706584e-05 1.34911624694912e-08 0 0 0 0.00030431524379512 3.0395404789055e-08 1.41111024006691e-05 0 0 0 0.000356146750541004 0.000409502141119971 4.13735343632818e-08 0 0 0 XM_005201211.1 LNP1 PREDICTED: Bos taurus leukemia NUP98 fusion partner 1 (LNP1), 3e-14 86.0 87.50 0.0224143451809158 XM_005254373.1 LIPC PREDICTED: Homo sapiens lipase, hepatic (LIPC), transcript variant 1e-06 60.8 78.65 0.0278578290105668 0 noncoding 0 0 0 0 -0.21051012176372 0.183107710177993 -0.0778145583220883 0.1655231821347 CTTCAATCTTGCCCTGCTGGGATAGCTTGAGAACCAATAGGGAAGAGTAAGGAATAAAGGATATCCCTTTTCCTGGGAAGATACTCTAAACTACATTCCCTTGCCTATACCCTGAAAAGCCTCAGCTACAGAGAGCTGCTAATTCCAGGGTTCAGGGAAAAAGCAACAGCCTTGTTCAAGCCAAAGCAGGAACTCTTTCTTTGGGTGGGCTCTTCCCTAGGTCCCTGGACTGGATGCTGGGTTCCCTGGAGCACTTTTAAGCAAACCAGACTGCTCGGGCAAAGTTTTGAAAAACCGTTTTGGAAAGGCTGGGCCACAGCATCTCTTACCTAGACCTGCTACGGACTCATGATTGAAAATTGCTGACTTCCACAGTGCAGCCAGCTGATTCATGCTGTATTCTGAAGGTTATGAGTCTCCATGTGATATTAAGAACTGTACGTCTGAACCATTAAAGAAGAAGTGTATAAAATGCAGTGTGGCTCAGTGGAACTATATGAGCCAGAAGTATTTCATTTTATGCCCTGGCTCTAGCTATATTTGTAGCTTTTGAGCACTGGCAGTTCTTCTACTTTCACTTTTGGAGTTATAGCTGTCTCCTCTGTTGAAAAACAGAGAGCAAGGTTATTACCAGATGAGTTCTTTATATTTATTATATGTGTTTTCAGCTCAACTTACAAATGCCCCTATTTACTGAATTGCTGCTATATGTAAAGTTTTGTACTAGATGCTTGAGAGGACTACCAAGATGATTCAGATATAGAGCTGCGGAATTTATAAGTACACCATAATTGAACTGCACAGTAGAATGTGTTGGAGAGTATTAGAAAAGTACAAAGCATTAGAGATTCAAGAAAGGGAGATGACATATTGTTTGTGAGATCTGGAAAAGCTGCATAAAAATATCTTCTGAGATGTGCACTGAAGGGTGGGGAGGAATTGAACAGATGGAGCTTGTTTGGGTAAAGGAAATCCGGGAAAAGGGAAAATCACGAATTTGCCCATACAATCCTGGGAAAATAGGGAGCACCATTAACACACAGTGGGTTGTCATGGGGGCTGTACAGCAGTAAAGGGCACTGTGTCCACCTGTGGCTTCTGCCCTCTTCTCTGGTGTATCGTTGCTAGAGTGTGACTACCCGACTGAAGGCTGCATTTCCCAGGTTCTCTTGGAATAGAGGTGGAATGGATGAGTTATTTTCAGGCTTCACATGCTAGGTAGAAGTCGATTCTTGAGGTGACCTTGACAGCCTTGTACTGCAGTTGGTATAGCCTCTGTCAGCTTGGATTCTGAATGACTGAGTGGAGCAGACCTTTCCTCACCTACTCCAAGAGGGAAGACTCATATATACTTACATGAGCAAGAAAAAACCCTCTTCAATGTGTTTAGCCACTGAGATAATAGGTTTTCTTAAGGAAGCTGGAGTTTTCCTTAACTAATGTGGTAGTTAAAAGGGAAAGGCAGTCCTGGCCACTGTTTGTGAGAGACAGCATAATATACTGGAGGCAGCTCTAGGTTAGAAACATGGATTTCATTATTCACTTAATTTTTCATTCATTTCATATTTATAGAGACTTTCATAGCCTGTCATATCTTGAGTTAAATGCTAGGAATGCTTTTGATTAATAATGCATAATTCGTGGCCTTATAGAGCTTCCAGTGGGGTGCAGGAGAATTAAAAAAAAACACACCAAAACCAGGCTGTCCTGATCCATTGGCATGCCTTAGACCAGCAGCACCAGCATTGCTCTGGAGCTTATTAGAAATGCAGAATTTCAGGCCCCACCCCTAAGTCAATGGAGTCATAATCTGCATGTACATTAAAGCATGAGAAACACTGGTAAAATGAGTGCTTTGGAAGGGATAGGCAATGGGACAATGGGAGCCCCAGAGAAGGACTATTAGTCCAGTCTTGATTGAGACTTTTCAGACTTTTGAGCAGTGTGGTTTAGTCATAATAATTGTGTCACTTTGGGTAAACTACTTATTTTCGACTTTGGTTTCCTTCTCTGCAAAAATATGTGCTACAATATGGGTAATATTTCAAGGTTGTTTTGAGTCTCAAGACTTCAAGGTTGTTTTGAGGTTCAAATAAGTAATATGTAAAAGTGCTTTGAATACTCTAAAGCTGTATATAAATGGAAAATTTTTATTTTTTCAGCTGTAGTTGGAGTAATGGAAAAAATTGTGTTCTTTGGTATAATAATACATTTTAAACAATGTTTAGTGAGAAAAAAAATTACCCCATGTGGATTTATTGTTTTGATTATATGCAGAACTGAAACATAATTTTTTTCCTCCTACTTATTGAAGAAGACTTTAAAATCTGAAAAATAGGTCTAGTATGTTGGTCAAATAGGGTGTCTCTTGGGGTTGAAAAGTATATTCCACTGGGGCTGTGGGCTCTGGACTTCAGCCATTTGCTCCGTTGTACAGAGTTTATCCAAAACATGGAATTAGTGCAGAGGAACTTTCTTTCAAACATTAGCTCCTGGGCTCAAACAGAAAAACTGAGCTGACTGAGTTTATTCAGAATTAATAGGACTTCAGAAGGTTAATGGACATAAACAAAGAGCAACAATTAATTCACGATGGTAGCAGTCCAGTAGTATAGCCTCCGCACAGAATTCCCTCACTACCAGCAAGTACTTCTAGTGATGTTAGGTTTCAGGCAAGGCTTCAGTTGTGTATGTTACAGTCGCACAAAATGACCTGTTCTTTTATGCTTCCGTTCTTTGGCACATTTTTTTCCCTTTACCCAGGGGTGTTCTTTCTTTTCTGGACCACTTGCGATATTTGGGCTACCTGATGATTTCCTTAAAGGTGTCTTCCAGATGGCATCTCCTAACAATAAGAGATTTTTATTGATCAGTGTGGGCTGGTTTAGACTCACCTTTCTCTACTTATGTATGATTCACATTGCTGTATGGCAGAAATAACACAACATTATAAAGCAATTATCCTCCAATTAAGAGTTTAAAAGAATAGATTTACCTTTCTCTGTAGCTTCATAGAGACAAAAAGAATATATTGAATCACACTGGGAACATTACTCCAGGTGTCTTGCTTCCTATCCCTAGCATCTGGTAGTGTCCTGCACATAGTAGTTCCTAAATAAATAT TCONS_00234987 TCONS_00234988 TCONS_00234989 TCONS_00234990 TCONS_00234991 TCONS_00234992 TCONS_00234993 r 5' 107125 TCONS_00234987 TCONS_00234988 TCONS_00234989 TCONS_00234990 TCONS_00234991 TCONS_00234992 TCONS_00234993 r 5' 106165 EMBV3_24685 GCCTGTCCAGAACCTGCTCCCAGGCTGACAGCCCAGAAGGATGCAGACGCTGTGGACAAG Variant GeneID:528735|S100A1:NM_001099042:153_cdna 279^431 1 EMBV3_20196 GeneID:528735 3 GENE S100A1 MGC159706 S100 calcium binding protein A1 EMBV3_35410 TCCTAACACCTCCTGAGAGCAAGAGCCCTATTTTTCTGCATGTTTGTGAAGCTCCCACCC Gene GeneID:539387|MPZL1:NM_001076158:5_cdna UTR3_Alt 3 NULL GeneID:539387 3 GENE MPZL1 PZR myelin protein zero-like 1 EMBV3_26136 ATCTTGAGTTTCTTCTGTGAGGCTCCCGCTGTGCTGAAGTTGTCCTGTTCTGACATCTCC Gene GeneID:509922|LOC509922:XM_002689129:112_cdna Constitutive 0 NULL GeneID:509922 7 GENE LOC509922 NULL similar to olfactory receptor, family 2, subfamily T, member 3 EMBV3_18090 CAGTTTGCTGAATAACCAGTTCTCTCCTTTTCCTGTGAAACTAACAGCTGCCCCATGCAG Gene GeneID:510751|GIMAP4:NM_001046060:622_cdna Constitutive 0 NULL GeneID:510751 4 GENE GIMAP4 MGC140410 GTPase, IMAP family member 4 EMBV3_14018 TCCGGAATTTCAAGATCATTTACCGACGCTATGCCGGCCTCTACTTCTGCATCTGCGTGG Gene GeneID:536553|AP2S1:NM_001076078:331_cdna Constitutive 1 NULL GeneID:536553 18 GENE AP2S1 MGC140595 adaptor-related protein complex 2, sigma 1 subunit EMBV3_03420 GAACAGTCAGGTAGGATCACACAAGTCACCGTGAAGCAATACTTCTCCACTTAGCCAAAG Gene BVT0102_146868 + 0 NULL GK000029.2:21408313-22263269 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28647 AGCATTCTCACACAGCTTTTTTCAAGTGTAGGAAACTACGTCGCTCTATTAGCGCCAGTG Gene GeneID:540863|CCDC18:XM_002686232:242_cdna Constitutive 0 NULL GeneID:540863 3 GENE CCDC18 NULL coiled-coil domain containing 18 EMBV3_41526 GTGATGAGACTGATGAGTTGGACTCCTTTGGGCCCTTTTCTTTGTGGTCCAGTTTGATCC Gene BVT0102_163234 + 1 EMBV3_11255 GK000010.2:30159345-30328464 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34497 TCAGCCAGAAGGTAAGAGAAAGAACGACATGGTGAGACCAAGTTTCGGTGAACAAGGCCC Gene BVT0101_054918 + 1 EMBV3_34562 GK000005.2:112209094-112226837 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204180 TCONS_00011558 TCONS_00071514 TCONS_00134878 TCONS_00138407 TCONS_00194588 TCONS_00132405 TCONS_00009395 TCONS_00019267 TCONS_00010745 TCONS_00138406 TCONS_00018727 TCONS_00226782 TCONS_00148378 TCONS_00112816 TCONS_00135618 TCONS_00197812 TCONS_00189837 TCONS_00151311 TCONS_00058128 TCONS_00081870 TCONS_00248780 TCONS_00220245 TCONS_00134877 TCONS_00056822 TCONS_00046799 TCONS_00118517 TCONS_00242190 TCONS_00021459 TCONS_00206255 TCONS_00169138 TCONS_00160954 TCONS_00070495 TCONS_00057018 TCONS_00166135 TCONS_00122090 TCONS_00057884 TCONS_00118479 TCONS_00002708 TCONS_00198834 TCONS_00065051 TCONS_00087961 TCONS_00177102 TCONS_00252994 TCONS_00005951 TCONS_00134876 TCONS_00100335 TCONS_00202228 TCONS_00023551 TCONS_00104531 TCONS_00220136 TCONS_00250272 TCONS_00118518 TCONS_00206254 TCONS_00196654 TCONS_00220133 TCONS_00118519 TCONS_00025023 TCONS_00167486 TCONS_00165861 TCONS_00186919 TCONS_00025022 TCONS_00243110 TCONS_00035886 TCONS_00120346 TCONS_00235856 TCONS_00037742 TCONS_00104532 TCONS_00171864 TCONS_00118516 62 XLOC_124364 XLOC_007109 XLOC_043285 XLOC_081568 XLOC_084615 XLOC_117800 XLOC_080770 XLOC_004951 XLOC_009947 XLOC_006296 XLOC_084614 XLOC_009409 XLOC_138080 XLOC_090260 XLOC_068711 XLOC_081841 XLOC_119473 XLOC_115874 XLOC_092080 XLOC_035925 XLOC_050747 XLOC_151723 XLOC_133562 XLOC_034625 XLOC_026938 XLOC_072652 XLOC_148854 XLOC_012132 XLOC_124865 XLOC_103286 XLOC_097847 XLOC_042273 XLOC_034820 XLOC_100973 XLOC_073646 XLOC_035681 XLOC_072637 XLOC_000664 XLOC_120487 XLOC_039775 XLOC_052749 XLOC_106876 XLOC_155935 XLOC_001514 XLOC_060578 XLOC_123873 XLOC_014218 XLOC_062403 XLOC_133453 XLOC_153215 XLOC_118400 XLOC_133450 XLOC_014641 XLOC_102322 XLOC_100701 XLOC_112967 XLOC_149773 XLOC_021016 XLOC_073143 XLOC_144309 XLOC_021571 XLOC_103929 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_29444 CCCACTGTTTGTGAGAAGACTTTGTCTCCAGAGTATTGCCTTTATAAGCAGACTGGCACC Gene GeneID:614879|TMEM33:XM_002688214:100_cdna Constitutive 0 NULL GeneID:614879 6 GENE TMEM33 MGC137428 transmembrane protein 33 EMBV3_07716 GAGCCCCACCTGCAAGATCCAGAAGCTCAGGCTAGAGTACTGCAGCCTGACAGCCGCCAG Variant GeneID:517087|RNH1:NM_001035319:2_cdna 280^450 1 EMBV3_34196 GeneID:517087 Un GENE RNH1 MGC126921 ribonuclease/angiogenin inhibitor 1 EMBV3_03195 GGTTAGTAGACTTTGTAGTTGCCAGTACTAGAAGAGGGGTTGTCTGAAGGAGATCAGCCC Gene GeneID:507621|SLC5A12:NM_001101059:20_cdna Constitutive 0 NULL GeneID:507621 15 GENE SLC5A12 NULL solute carrier family 5 (sodium/glucose cotransporter), member 12 EMBV3_22934 AGTCGCAGAAATGCAGCAACCTCTGGCTCTTCCTGGAGACAGGGCAGCTCCCCAAAGACA Gene GeneID:514305|TMEM141:NM_001034462:32_cdna Constitutive 1 NULL GeneID:514305 11 GENE TMEM141 MGC127716 transmembrane protein 141 EMBV3_39113 CCACATACAGGGCTGTGGTTAAATACCGCTGTAATGAGTTCTACACGATGACAACCAACG Gene GeneID:505819|MASP2:XM_002694057:161_cdna UTR3_Alt 2 NULL GeneID:505819 16 GENE MASP2 NULL mannan-binding lectin serine peptidase 2 EMBV3_15961 AATGTATAAAGTTAGGTGAAGCTGTGAAGGGTGTGGGGCTGTGCTGGGGCCGCTGTGAAT Gene GeneID:529056|PLEKHJ1:NM_001034569:60_cdna Constitutive 0 NULL GeneID:529056 7 GENE PLEKHJ1 MGC126988 pleckstrin homology domain containing, family J member 1 EMBV3_37377 TGGAAAGTGCGAAGCGAGGGGCGCACTCTGAGCCGAAATGGGCGACTGGAAAGGTTACAT Gene GeneID:521379|PFN3:NM_001077945:29_cdna Constitutive 0 NULL GeneID:521379 7 GENE PFN3 NULL profilin 3 EMBV3_34893 CACCACCAAGTGTGAGAGTGACCTGTGACAGTTATCACCACCAATGCTTGCACCCAAAGT Gene BVT0102_005776 + 0 NULL GK000030.2:13672117-13673662 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243762 TCONS_00243760 TCONS_00243764 TCONS_00243763 1 XLOC_150248 Coding TCONS_00243763 XLOC_150248 Coding Coding XPNPEP2 X:13656701-13673591 j TSS183327 3517 1 TCONS_00243763_5 448 0.0503269832243389 15 0.792646101012493 0 0 5.23320668132904e-06 2.74235451558087e-10 0 0 1.32446154772506e-10 0 1.86433385252894e-10 0.000175527220224563 7.03654819977203e-05 5.44442029811798e-05 0 0 1.21653906641951e-10 0.0243400956746522 0.0162693238792869 0.00101130258832602 0 0 0 0.00240324525550078 0.00553160902351848 0.00748488415805107 0 1.67922922688215e-10 0 0.00141300189749292 0.000342454628280206 0.00124741500024868 NM_001205555.1 XPNPEP2 Bos taurus X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound (XPNPEP2), mRNA. 0.0 3644 99.95 0.574921808359397 NM_003399.5 XPNPEP2 Homo sapiens X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound (XPNPEP2), mRNA. 0.0 1701 84.55 0.428774523741825 TCONS_00243763_5 sp|O43895|XPP2_HUMAN XPP2_HUMAN Xaa-Pro aminopeptidase 2; 0.0 830 88.17 0.997767857142857 1 coding 0 0 0 0 -0.365738307666462 0.167893064043962 -0.08692254514407 0.432497919475281 CCCATATCCTTACTGACTACACAAGGAGCACCTGGCAGGAGAAAGTAGCTGGCATCCGCAGCCAGATGCAGAAGCATCATAAGGCCCCAACTGCTGTCCTTCTGTCCGCACTGGATGAGACAGCCTGGCTCTTCAACCTGCGTGGCAGTGACATCCCTTATAATCCCTTCTTCTATTCCTACACGCTGCTCACTGACTCCTCCATCAGGTTATTTGCAAACAAGAGTCGCTTCAGCTCTGAGACCTTGCAGTACCTGAACTCTAGCTGCACGGGTCCCCTGTGTGTACAAGTCGAAGACTATGGCCAAGTCCGTGACAGTGTCCAGGCTTACACCTCAGGAGACGTGAAGGTCTGGATCGGGACCAGCTATACCTCATATGGGCTCTATGAAGTGATACCCAAGGAGAAGCTCCTAGAAGACACCTACTCCCCAGTGATGGTAACCAAGGCGGTGAAAAACAGCAAGGAGCAAACCCTCCTCAGGGCCAGTCACGTGCGGGATGCTGTGGCTGTGATCCGCTACTTGGTCTGGCTGGAGAAGAATGTGCCCCAAGGCACCGTGGATGAGTTCTCGGGGGCAGAACAACTGGAGAAGTTCCGAGGAGAGGAAGAGTTCTTCTCTGGATCCAGTTTTGAAACCATCTCTGCAAGTGGCCTGAATGCCGCCCTGGCCCACTACAGCCCCACCAAAGAGCTGCACCGCAAGCTGTCCTCAGACGAGATATACCTGGTGGATTCTGGAGGACAATACTGGGATGGGACAACAGACGTCACCAGGACAGTCCACTGGGGCACCCCCTCAGCTTTCCAAAAGGAGGCGTACACCCGCGTGTTGATAGGAAATATCGACCTGTCCAGACTCGTCTTCCCAGCTGCTACCTCAGGGCGAATGGTGGAGGCCTTTGCCCGCAAAGCCTTGTGGGATGTTGGGCTCAATTATGGTCACGGGACAGGCCATGGCATTGGCAACTTCCTATGTGTGCACGAGTGGCCAGTGGGATTCCAGTCCAGCAATATTGCCATGGCCAAGGGCATGTTCACTTCCATTGAACCTGGCTACTATCTGGATGGAGAATTTGGGATCCGTCTGGAAGATGTGGCCCTTGTGGTAGAAGCAAAGACCAAGTACCCAGGGACCTACCTGACCTTTGAAGTGGTGTCCTTGGTGCCCTACGATCGCAACCTCATTGATGTCAGCCTGCTGTCCCCTGAGCAGCTCCAGTACCTGAACCGCTACTACCAAATCATCCGTGAGAAGGTGGGCCCGGAGCTGCAGCGACGCCAGCTTCAGGAGGAGTTCTCCTGGCTACAGTGGCACACAGAGCCCCTGACCGCCAGGGCAGCGCCCACCGCCTCCTTGGCCCCTCTGGTGACAGTCTCTGCTCTCGCTATCCTAGGCTGGAGTGTCTAGTGTCTGAGACTCCCCTTCTGACCCTCTCACTCAACTCCCCTCACCCCACAACACCCATGCCCAAGAGCCCCCGCCCACCCATTGCCTGGAAACCACCACCCTCACCCTCCTCCTCCGGAACCAAGCCCTAGGGGTGTGCGGCTTCTTGGTCACTGTCAGCACCTCCCCCGACCCCCTCTCCACCCTACACTCCCACCCTCAGGCTGGGGCATGTCACCCTCAGCTCCCAACCCCTAGCCCCTGGATACAAGAGCCAGGTGGTCCCCTTTCCTCCTATGAGTCTGGCAGACCAGCCACTGACTTGGCAGACCCACCTCCTCCCCCACTTCAAAAGATCAATACAAGACAGCACCCTACCTCCCAGGAGCTCCAAGGCCCTGTGAGAGCCCCACTCTGTCACACCTGCTGGATACAGCCTGACCTACACTGGTTCCTGACTTGTGGGTATTCCCACACCCTTGAGGCTGCCACTGGCCTCCTGCCCTGGCCCTGACCCTACAGTGGCCTCCTGGGTGCAGTCCACAGGCTGAAGGAACAGTTGCTGCCTCCAGGCTGCTGCACCCCTGGAGGGAGAGGAAGGGATGGCAGATGAGGCCTTTGGCTGTATTACTGCCACTCCAGGGTCAGACAGACCAGCCCCCCTACCCACCCATGTGTAAGCCCATCACTCCTAAACCCATGCCTACTACTGACAGCATAGGGAGTTAAGCCATAGGAATCTGGCCAGGGGTAGGAGGGGACTCTGGAATATGGCCCTACTCGAAGTTGGGAACAACCTGAGCAACTCTACCCAATCACTACCCCAGACTTCCCAGCACGTGGGTCACCCAGTGAGCTTTCCAAAGCACAGCCACTGGGACCATGCTGAAAAATCCTCCAGCATCCTTGGGTGGTCATTAACCTGTGTGGGTGAAATCTGGTCTCCCCATTTTACAGATAGGAGAACTGAGTTCCCGATGGGGTAAGACCTGCCCAAGGACACACTGTGCTTGGTGGGAACATGGTGGGGCCAAAATGGATCAGCAGTCCAGATCTTTTGCCCCTTGGTATCATGCAGAATGCCATAGCCTACCTGCCAGCCCTTTCCAGGTTCGCCGAACCAGCGGCTGGGGCAGTGGGGAGGATAGGGAAGGGCTGTCCCTGGCCAGCCGAACCGTTAGCCACCTGGGCTCACATCCTGCTAAAAGCTTGAAACAGCCTGGCAATGAAGCCTGCTTCTGGGTTTTGCATTGTCTGCTGTGCAGCCGGGGACTGCTGTTACCTGTGGCTTTTGTGGTGGGGGAGGAAGGGGAGGAGGTGAGGTGGGGGCGGGGATGTGAGGCTCCCAGAAGCTCAGTTGGGGAGCACATGTGCTTGAGAAGGTGCAAGTGAGCATGCGTGCGCGTACGTGGATTCTCATGCATGCCATGCCCAGCCAACCACCTCCTGTGGTAAAGGTTGTAGCTTTGTGGACAGGACCAGGGGAGCCCATGCTGGGGGACTTGTCAAAGGTGGTCCCGGAAAGTTGGGGCCAGCACCAAGGGAGCACAGTCAGGGGAGGAGAAAAGGAGAACTCGGGGGCAGAGTGCTGAGCAAGGGCACCTGGCTGAGGGGTCCCCCGGGCGGCACCACCAAGTGTGAGAGTGACCTGTGACAGTTATCACCACCAATGCTTGCACCCAAAGTCCCCAGCTCTGAGCCATCCTCACTGAGAGCCTGTAGCACCCCATGGTGGGCCCCTGTTTGCTGAGTCATTTGATCCCTCACAAGCTCACCCCACAAAGACAGGTAGTCATAATGAGTCGCCGCCACCACCATCATGGTCATCAAACCTATCATCCACTGAGTGTTAACCATGTACCAGGCACTGTGTTTTACATTTTTTTAATTTTATTGTGCTAAGAACATTAAACGTGAGATCTACTCTCTTAAATTTTTTTTTTTTTTTTTTTTTTTGAGAACGAGGGGGCTTTATTACAAATGCAGTTGACTGCTTAGGACTCCCTCTCCAATTTTTCTTTTCTACTCTCTTTTTCTCAATACATCCCTCCAGGGCAGGTCAGTAGGCCATTAGGGAAGAGGTATACGGGGAAAATTAAAAGGAGCAATGCTTTCTCCAAAATCAT EMBV3_17047 GACAACATCCAACTGCAGGATGTCACGTGAGGCTCTTCCTAAGGGCTTTTTAGAAGCAGC Gene GeneID:511223|VPS36:NM_001098939:94_cdna Constitutive 2 NULL GeneID:511223 12 GENE VPS36 MGC157100 vacuolar protein sorting 36 homolog (S. cerevisiae) EMBV3_01353 CTGGCCCATCCTCTTCTAAAACATAAATTCACAGAAGACACAGGCTGAGGAACAGTCACA Gene BVT0102_063012 - 0 NULL GK000019.2:50676164-50732383 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19740 GTCAGGGCTGTGTGCTGCTGGTGACGCAACACCCTGGGGACTTCAAACCTGCGGATTAAA Gene GeneID:539860|SETD2:XM_002697109:16_cdna Constitutive 2 NULL GeneID:539860 22 GENE SETD2 NULL SET domain containing 2 EMBV3_38511 GAGATTCACCATTTTTTCTGCCATGTGCTTTCCCTCTTGAAGTTGGCCTGTGGGAAGGGG Gene GeneID:615150|LOC615150:XM_002688588:310_cdna Constitutive 0 NULL GeneID:615150 7 GENE LOC615150 NULL similar to Olfactory receptor 10H4 EMBV3_03518 TGTTAGACTGCTGGTCATGTCAATTACTTCCAGGCTACAGTCACACTTGGAATACAATGG Gene BVT0102_089803 + 0 NULL GK000002.2:964541-973926 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101442 TCONS_00101443 1 XLOC_061683 Coding TCONS_00101442 XLOC_061683 Coding Coding NIPA1 2:878460-969049 j TSS75818 7630 1 TCONS_00101442_2 501 0.0319790301441678 5 0.91582770344858 1.51001051441677e-05 5.21949335602102e-05 9.48709176294356e-05 0.000176313983967187 8.31303360793235e-05 6.5165228438333e-05 0.000112912068906707 0.000106201330724221 6.62740536356688e-05 3.01981166721055e-05 1.39887376756492e-06 5.15498407118244e-06 4.53248059276743e-05 2.85715608977484e-06 0 0.000886155313198942 0.000208827695854873 4.56559834065492e-157 8.97643770546653e-05 0.000158979027079824 7.45929598621133e-06 0.000464885413652756 0.000225819308665593 0.000532821497664343 0.000214087190354286 2.59405314095695e-82 3.6724080459492e-05 1.57893499370727e-05 2.67883986441422e-05 0.000203296916382666 XM_002685192.3 NIPA1 PREDICTED: Bos taurus non imprinted in Prader-Willi/Angelman syndrome 1 (NIPA1), mRNA. 0.0 1103 100.00 0.0799475753604194 NM_001142275.1 NIPA1 Homo sapiens non imprinted in Prader-Willi/Angelman syndrome 1 (NIPA1), transcript variant 2, mRNA. 0.0 2277 73.25 0.498165137614679 TCONS_00101442_2 sp|Q7RTP0|NIPA1_HUMAN NIPA1_HUMAN Magnesium transporter NIPA1; 2e-51 181 100.00 0.177644710578842 1 coding 0 0 0 0 0.0178750433995288 0.909365698644875 -0.0105806071596535 0.850548081934562 GACCTGAAACGAACACAAACACCACCGTAAATCAATTACACCCCACTAAAAATTTTTTAAAACCTGCAATATTGAAGACCTAAACCTCTTCAGAATTTTACAAAGTCCCTCCCGCAAGGTTTAATACAGCAAAAAGAACAGAAATGGAGAAGGGGAGCACTAGGGAGAGGGGAGTCAGAGGAGGAGGGAGAAAGACAGAGGGAGGGAGGAAAAAGCCTACTTCGAGTCCAGGTAAGCGACTCACAGACAGGGTTCGCCCGCGTCTATACTACATGGGCGAGACCTTGAGAATGGACGGTCACAGAGACCAAATCACAATGTCATTTCCTTCCCTTAAATCCAAAAGGTTAACACACAAACTGCAGGAACCCCACGCCTCCACGACAAATGACACCAGCATGCATTATCCGCTTTACCTCAGAGCAGCAACTGGTGCGTGAAATAAATTAATCAAAATTCACGTCTGCAGAAAAATCCAAAACAATAATCACTTGGAAATGAAAAGACAGCCTGAGACGCGCGCCGAAGGCGGTCAGCGCAGGCCCGGGCCCAGCGGCTGTGCCAACGCCCGCCGTGGCCCGGCTTGGCCCGGCCCCGGCCCGCACCGCCCCAGCGGCCGGCCGCCCTCGCCGCACCCCCGCCACCCGGAGTACGAAGACCGTACGGCACAGGCCCCCAGCCGCTTAGCTCCAGCTCGTGCTAACACAGACCAGCCGCCACTGGCTCCGCCGGTGCTCGCAATCCCGGCGTCTCTTGCGGCCGGAGGGGCGGGTCGACGCGGGGCTAAGGCCCACGATGCTCAGCCAATTGCATTGAGGCGTCGCCGCGGGCCCAGCCAATGGGAAAGAGGAACCTCCTCGCCCCTCCTCCCGATTCTCCAATTTTCTTCTATCCTGCTCGTCTTCTTCCTTAAGCTCACCCCTCTGCGGTCAGGGCCAACCGAAGACGCCGAGAGGCGGGATTTCCGCCGAATGCACGCACACACGCACGCGCTCCTGACCTGGATTTCGCACTGCGCTCTCAGAAAGCCGTCAAGTGTGGTGGGCGTCCAAGACTCCGGACTAGTACAGGGACGTGCGGCCTGGACGGGCGCTGGGGCTAAAAATGAGATTGGGGTCTGCAAGAGCCTCTTTCTGCCTGTCGCACTGAGTGCTGCTGAAACCCTGGGCAGAATACGTGGAGCAGCTGGTGGCAGGGGAATCGGAAAAGGAATTGCCAAATCTGGAAACTCTGCCTCTACACCCACCCACCTACCGTATCGCTCCATCCCTCACCATCGCGGCCTCTTAAGGCGCTCCGAACCCTCATTCGCTTCCTCTCGGCGCTCACCCTCCTCCCAGAACTCGGGATCCACCCTCCGCCTGACCTCCACGAGGAGCCCAGACTCCACCCTGCCTCCGTGCCGCCCAAGGTCCCCCCGCCCCACAGCCCAGTTGCTCTGCCGAGGAGCCGGCCTCCGCCTTCTGGCCGGGCTGGCGAGCGCGCAGGCGCAGAGGGCGGGCACGGGCGGAATGGGGACTGCGGCTGCTGCAGCGGCGGCGGCCGGGGAGGGGGCGCGCAGCCCGAGCCCCGCCGCCGTGTCGCTCGGTCTGGGCGTGGCCGTAGTGTCGAGCCTGGTGAACGGGTCCACGTTCGTGCTTCAGAAGAAGGGCATCGTGCGCGCCAAGCGGCGAGGTACCTCCTACTTAACAGACATTGTATGGTGGGCAGGAACAATTGCAATGGCTGTTGGCCAGATTGGAAACTTCCTGGCTTACACAGCGGTCCCCACGGTCCTGGTGACTCCTCTTGGTGCCCTTGGAGTGCCATTTGGTGTTTGTGGGCTATCTGTGCATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATTGCACCGGCCCACGGGCCCACCAACATCATGGTCTACATCAGCATCTGCTCCTTGCTGGGGAGTTTCACCGTGCCTTCCACCAAGGGCATTGGGCTGGCTGCCCAAGACATCTTCCACAACAACCCATCTAGTCAGCGGGCCCTCTGCCTGTGCCTGGTGCTCCTGGCCGTGCTTGGCTGCAGTATCATCGTCCAGTTCAGGTACATCAACAAGGCCCTCGAGTGCTTCGACTCCTCTGTGTTTGGGGCCATCTACTACGTGGTGTTCACCACACTGGTCTTGCTGGCCTCAGCCATCCTCTTCCGAGAGTGGAGCAACGTGGGTCTGGTGGACTTCTTGGGCATGGCCTGTGGGTTCACCACTGTCTCCGTTGGAATTGTCCTTATACAGGTGTTCAAAGAGTTCAACTTCAACCTGGGGGAGATGAACAAATCTAATGTGAAAACGGACTAGGATGTGACAAGGAATTGTATGGCTTGAGGAACAGAAAGAAGATATGGTTTCTGGTCCTAATTTGATGTGAAGTAGAAGAGTAAATTTACACAAGTAAATGGCTTGTGTTGGAGTTGCTTGTATATGATGAATAGGCTGGTGGAGAATGAGGATGCGTTGCTTAGCACTGGAGTGTGGACTCAGCCTTCTGTTCTCTGAAGTTGCTCTATGGTTGCCTGAGTGCCATCTCTCTCAGATGAGACGAATCTTATGTTCATTGCCATTAACCTGGAAGCTTTGATGAATACTCTTTGCTTTTAAAACACTATCATTATTTAAATAGAACGGGCCTATTCTGGTTAGTGTTTGCAGGGGAACAGATATTCTTATTTAGAAGCTTACTTTGGAAATGGGAGAAGGTGTTGTCTTGAAATCTGACTCTACAGTAAATGTGTCTTTAGTCTTGTTATTTTGCATTAAGCATGTGTAACATTCAGGTGTTCCATCCAAATCAGAGGTATATACATTTAATTGTTTTTAATCCTCTGATGTGTTGACTCTCCTACCCCTGACTCCTAGACATTTTAATTGGAAACAGAGAAGAGTGAATGGATACCATATACTGTTCCATTTGCAGGATGATTTTCAGTAGCTCAAATCAATTTCAGTGCCTTTATCACTTGAACTATTCACTTAATTTGACTATTACTGTGTGTGTGTTCTCTTAAATTAGAATAATGCAACTTCCATGATTATACTTTAGTATTTCACTATTCAAACTATAAATGTTCAAAGCAGTTATAAATTATAGTATATTATTTATTGGAAGAGAATCAAGATGAAAGACACGCTGGAGTAAGTTGACCCTTTCAGCATGTGTTATAATCCAATGAAAGACAATTGACTAAGTAGCATGAGGTATTTTATTTGTATTCAGTCTAATATAACTGGGATCCAGTATTAAATTTACCCATGTTCTCATTCAGCAAGCATTGTGTCCACTAAGAAGAAATTATTTAAGTTGATAATAAGGCTGTTAAATGAGATAGTACCTGTTCAGTGGCACATATGAGTTCAGGAACAAGTTAAAGGACACAATTAAGCTTAAGTTTGTTGTTGTTTTTTTTTTGCTACAAATTGGAACACACATAGTTTTAGAAAGAATTTCTAGCAAAAATGAAAACAGTTTAACCATCTCCCTGTTGTTTGAGATGACAAAGCACTCTGCAGTCCCTCACCCAGTCTCTCATTAAACTTCTGAAATGCAAAATAGCCATGAATTATCCCAGCATTTGGATCAAAAGAGGTCATTTGCCTGTCTATAGTAATCTTCCATGTGTATGAAATAGTAACAAGGCACAGAGTGACGCAAATATTCATCAAGATATCTATATACTTCATCTGCAATATTGTTCACCCCATCCCACCCTGCGAGACTTGTGGGATTTCCCTACCAGGGATTGAAACGGTGCCCCATGCAGTGGAAGTGCAGTCTTAACCACTGGACCACCAGGAAAGTCCTCAGGGCAGTGTTTTGTCTAAATAGGGAACTAAGCCAAGTTGAAAAATGAGATTGAGTAAAGTGATGGGATTGACTTGGTGAAGTAGAACATGGAATTTAATAATACCCAGTTAAAATGACTAAGGAATGTCAATAGAAAAAAATGTATTTTTTTTTTTTTTTAGATAAAAAGAACATCTCTAAAGACCTAAGGGATAGTTCCCTAAAGTGTTGAATAAAGAGGCTAAATAAAACAAGGATAGAGCAAAAAACACCCTTATGAATTAAAAGTACATTGGATGATCATGAGTTGTCAGTGAGCTGTGAACTAACAGCAGCAAGATTATTTAAAAATTTTTCTAAATCTTATAGTAATTGATAGTTAATAAATGCTCAGAAATCCATTACTCTTTTTATCAACTCTTGAAGGTTTGTTTTTTATCATCAGTATTTTTAGGAATACAGGCCTTAATTTATTGAACTGAATTTTCTAAAAATGTAGGTGTATAAATAGTTTCCTAGGTAAGGAGTTGAGATATTCAAAAAATACATGTGGCTATACAAGTATCATAAGAAAGTTCATGGAAATTACCTTTTTTTTTGGTTGCAATTCACATGTGAAGCTTAGTTTATTTAAATCAATCTATTGATGTTCCTGATTGCAGTTAATCCGTGGTTATTCCATAGATACTTAGAGGTGATATTTTCTGGATTATCTCCCTATGATTTTTTTTTTTTTTTTAGTAAAATAAAAACTCGAAGTATAAACAACTTGTCGTCTCTTGAAGGTGGTAAGTTATAGTGAATAGTTAGACTCTTCCAAATTTATATCTGTTTAGCAGATTACTTTGGTAGGATGCACAGCTTTTCTTCCAGTGGAATGCAATTCATATCATCCATTGTATTCCAAGTGTGACTGTAGCCTGGAAGTAATTGACATGACCAGCAGTCTAACAGCCTACTTTTCAAGTTTGACATACAGCATATAACTTCTGACTTACAGTATTTATTTTACAAATCTGTGTTTTTATAATTTATTTGGAATTAAAAAAAATAAAAGCTTTAAAGAGAAAGGGAATAGGTCTTACAGTGATCTTTCCAAAAGTAAACATTTTCATTATTATGCTATTCTCTGGGTTTTATCTTTGATAAAACTAAGGAAAAAATTGTCCATTTGTTTTCAAGCCTCCTGTAAAATCTTATGTTTGTGATTAAAACTTGCACATTTACCTGGATAGATATCTAAATAGGCCATGTCTCTCCTCTCTTACTTGGACAATGCCTTGTTTTCTCCTCTGAATCTTTGCATTTAAAAAGATTGCTTCCTGTTCTGCTCAGTGGTCAAGTGTAGGGCCTATTAAGGATTCTAACCCAAACCCAGCACCGAGATCACCCTGAGTACTTTGCTGTTCTATAGGACTGCTCCATCTCTGCAAAGAAGAATCCGGAGAGGAAGGGCAGTCTCTCCGCTGCCACATGGGGAGCAAGAACTCCCCACAGGTGGGTCTTCAGGGGGTATCATCACTCAGATGTTATTATGGTCTTTTCACATTAGAAAGTTAGTGAAATACACTTTGCTGCTCTTGATTCAGCAATAAGAAATATTCTTTCAATTCCTACTTTTCAAGCCAATTTGTTATCTGCAGTTTTATTTCCAGAAGTTGATTCTAGGTGTAGTCAATAGATTGATCTTTGGGTTTTTCTTTGGGTTTCTCATCTGATAGAAGAAAGTACTATTAAAGTAGGCAGTCACCTCTCATCTTCCTTCTTCATTGACCTCTCAGCTCTTTGTAAATACTGTGCTCACTTCTAGAGGCCAGTTCCTAGACATCTGTAAAGTGCTTGAGATGCACCGTCTGTAGGCGTGGATGAGTCCACGGAGACTGAGGTGTTTGTTGGTCACAGGCTACTGTCGGGCTGCCTAATTCTTATTGGGAGATGATACCTCTCTTTTCTGAGCTTCTCAACTAACGCAGAAGAGCAATCTGCAGAGCTCTGCCCATCACTCTTCTTTGATGCCTGCTTGATCCTGACTTAGAATTCCTGGGACTGAGTAGGAACCTGCAGAGAGAAGAAGCTTTAGTTTAGATCTGTTCATGACTGATCAGTTGGCTCCAGTGGTCTGATGAAGTTGTCCTTAACTGTGTCTGACACCATGGAAATAGTTCACCCATCAAGCAGGATTTGATGGAATCTTGGTGTTCTACCTTCTCAGGGACCAAAAATGTAACATTAACTCCTTAGCATTGACCTTCCTCTCAAAGACATGTCTGTGTTATTAATAGTTTTTCATATGTTTTACTCATAATCATAGCTAGAGGTCTGTTAGTTTGAGTTGGGAAGAGAAAGACCAGTTTGTACACCAGTCACACCATAAAACAGTTTATCATATAAAATACCTCAACTTTCTGTATTCCTCACCTCCGCCTCAAAGTTGTACTGGTGATAATTTTGAGGGTCTATCCTTTAGCTTATAGGTGAGTTTTCACATCTGGCCAGATTCTTATACCTCCATCATATACTTGAATAGATTAAGAAATATAGGAATGGGAACAAGAATTTGGCCCAATTTCACAACTCATTTATTTTCATACATATTTCTCACATGCTGTTAAATGCAACAAAAGAATTATATTTTAAAAAAGTGTAACTTTCTGTTACATCAAAAAATACTGTCTAGTGAAAAGTTGATACTCAGTAGAACAATGATCATGTAAATAAACATCTATTTCAAATGTACCCAATATGATAAAAAGCATAGTCTAGGCCCCAGAGCATGAGCCGGGAGGATTTATTTGTTATTTTCTCTATTTTCCTCTGAATTGTGCAACTGTAGGTGAGTCACTTAACCTTTCTGTGCCTCAGTTTCTCTACCTCTAAAGGGTGGGATGGGTCTCCATATCTGTGTAAGAGCACTTGCATGTTTAGCATATGCTGGTCACCTCAGACCAGAGCGCATGTACAGGACTCCTTGGGAGTGATGGACTGGGCATCCTGTCTGCTCAGGACCATGCAACTTCGAGCACTGAGTAAGCAAAGGAAGCACTGGGTGTAAAGCTTGCATGATTCTATGAAGCTTTAATTTTCCTTTATTTTTTTGTTTTAAAAAGAAGGGTTTTATATATTCTGTTGTAAAATATGGAAATTAAACAAGGACTTTAAAGAGCTGCACTGAGAGATCACATTCTGATGGTGTGATGAGCTTCTTTGACATTTCACAAAGGTGTATGTTCTGCAGAAGAATCAATGACCTGTAAACCAGATGAATTCTGTTGTGTTTACTTTGTAATGGGTGATGCTGAACTTCCTGCTTCCGAGCGGCTCAACCCTGACCATGAACTACCTGACACCAGGTGGATGTCAGGAACTCCCAGACCATTAGTGCCAAGGGTCACACTGAAAAGCGCAGAATCTCTTTATTTGTCAGACCATAAAAATTTGCCCCCAACCCCAACCTCATGTCAGTGTTTTTACACTTTGGAAAAATTTAAGAGTACTGTTTTTCAGTAGAATTCCTGAGTGTTTTTGCCTCTTTAAATAATTTTCTTGTAAAATGGAATATAATTGTGAAAGAGGAATAAAACTAGATAAAAACTGTAAAATGTTGGTTGGTTGCATAAAATTTTTTTCATGTAAATGTATCAGGAGAGCTTCCAATTGGCACACACACATATTTGTCAATGACTAATACTTGCTTATATTCTGCTTTATAGAAGTAGTCATAGCATGTTGTAATTGCCTTATGTAAATAAAAGGCTATTTATTAAGTTTTCCAATAATATTTATTAATATGTATGTGTTTTAAAATAAAATAACTTATTTCTA EMBV3_28858 CAGAAGCCTATTTCGAATGCGGTGCTGAATGAATACCTGGAGCAGAAGCTGGTGGAGTTG Gene GeneID:513911|C9HXorf21:NM_001038537:5_cdna Constitutive 0 NULL GeneID:513911 X GENE C9HXorf21 CXorf21 MGC134355 chromosome X open reading frame 21 ortholog EMBV3_07642 CCCAGGTCCACAGAGTGGGAACTCACTGTCCCTTGTGTCAAGACATTTCTCTTACTCCTG Gene BVT0102_141756 + 0 NULL GK000007.2:53193429-53216664 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217162 TCONS_00217161 1 XLOC_131433 Coding TCONS_00217162 XLOC_131433 Coding Coding HBEGF 7:53215237-53227884 j TSS161779 2941 1 TCONS_00217162_2 208 0.136348180890853 7 0.767989878222363 0.00559425639744562 0.00825454837313003 0.0088453686638514 0.00640333392083408 0.00360235808538316 0.00148532183504856 0.00368348308468432 0.00538504224705971 0.0062351056955275 0.000719698128596889 4.69156653233725e-05 0.000333800296130479 0.00113923519636628 0.000377969681565601 3.28880861837095e-07 0.00905153856689032 0.00227986873938021 0.00949240548287089 0.0120066846410719 0.0142431034240564 0.00684353437565768 0.00127084714945611 0.000486359195431928 0.00318321208048941 0.00890786362007991 0.013579919321455 0.00932560455355439 0.000590221430870214 0.000342709892602962 0.000902310696265779 NM_001144090.1 HBEGF Bos taurus heparin-binding EGF-like growth factor (HBEGF), mRNA. 0.0 2890 100.00 0.544372662359742 NM_001945.2 HBEGF Homo sapiens heparin-binding EGF-like growth factor (HBEGF), mRNA. 0.0 1831 85.52 0.541652499149949 TCONS_00217162_2 sp|Q99075|HBEGF_HUMAN HBEGF_HUMAN Proheparin-binding EGF-like growth factor; 2e-111 322 87.98 0.995192307692308 0 coding 1 1 1 0 -0.139010091582878 0.419291019776632 -0.214853746780605 0.0104301993828677 CTCGGCGCCTCCCGAAGCCTTATTCCAGGCTGCACGCCGAGGAGTGCTCAGTCGACCCAGGGAGCTGCGCGCGGCAAGCAGCTGGCTCTCTTGCTTGAGGCACTAGGGCTCGGGCGGTCGGACAGACGGAGTGAATAGAGAGACGCCCAGCGGCCGCGAGCTCCGCGCAAATCCCAGGCAGGCTTGCACCCAGAGGCCGGCAGCCGACCGTGCCCGCCGGGATCTCCAGAGCTTCTCCCGCCCGTCTCCCGTGCCAGCGTCCGGTGGTCGCCGCCCCCCAAAGTGATTGCTGCCTCGCCTCCGCCGAGTCCGGGACCATGAAGCTGCTGCCGTCGGTGGTGCTGAAGCTCTTTCTTGCTGCAGTGCTTTCGGCGTTGGTGACTGGCGAGAGCCTGGAGCGGCTTCGGAGAGGCCTGGCTGCTGGAACCAGCAATCTGGACACCCCTACTCAATCTACGGACCAGCTGCTGCCCGCGGGAGGTGGCCAAGGCCGGGAAGTCCTGGACTTGGAAGAGGCAAACCTGGACCTTTTCAGAGCTGCTTTCTCCTCCAAGCCACAAGCTCTGGCCACACCAAGCAAGGAGGAGCGTGGGAAAAGAAAGAAGAAAGGCAAGGGGTTAGGGAAGAAGAGAAACCCATGTCTTCGGAGATACAAGGACTTCTGCATCCACGGAGAATGCAAATACGTGAAGGAGCTCCGGGTTCCAACCTGCATCTGCCACCCAGGTTATCACGGAGAGAGGTGCCATGGGCTGAGCCTCCCGGTGAAAAATCGCTTATATACGTACGATCACACAACCATCCTGGTTGTGGTGGCTGTGGTGCTATCATCCGTCTGTCTGCTGGTCATCATGGGGCTTCTCATGTTTTGGTACCACAGAAGAGGAGGTTATGACGTGGAAAATGAAGAGAAAGTGAAGTTGGGCATGACTACGTCCCACTGAGAGGAACCTGCGCTCAAGGAATCAGCTGGGGACTGCTACCTCTGAGAAGATACAAGTTGATCACAGATTCTACAGAGGGGAAGGACTTCACAACTAGCCATGAAGATTCCTTCATCCCCAGTTGCCATCTAGATTGGGCCTCCCATAATTGCTTTGCCAAAATACCAGAGCTTTCAAGTGCCAAACAGAATATGTCCAGTGGGATCTGGGTCAGAAGAAAGCAAAAGTGAGGGACCTTCGTGTCCTGATTCTCCTGCACCAAGCCCTACTTACCCCCATACGTTTGTTTGAACACTTCTCTTCTGGATTAAAAATGCCAGTTAAATTCCATATGCTCCAGGATCTTTGACTGAAAAAACAGAAGGAGAGGAAGAAAGAAAGATTTGGGGACTGGAAGAAAGTAATAAAGATCGAGAAGCCATGTACTCAAGTCACCACCAAGGGATCTGCCATTTGGACCCTCCAGCGCTGGATTTGATGGGTTAACTGTGAAATACCATAGACCTGAGAACTCTGAATTTTGGGACTTCTACCCAGATGGAAAAATAACAACTATTTTTGTTTGTTTGTTTGTAAAATGCCTCTTAAATTATATATTTATTTTATTCTATGTATGTTAATTTATTTAGTTTTTAACAATCTAACAATTTTTCAAGTGCCTAGACTGTTACTTTGGCAATTTCCTGGCCCTCCACCCCACAGGGGGAGTTCTGTATGGTCAGGATGTAGGAATTAACTTTGTCAGATCCACTCTGTGAGTTGGACTGCAGTCTTGCCTAGGCGATTGTGTCTACCGTTTGTGTTTTGAAAGCCCGCGGTGCTGATGTCAAGATGTAACAGATATCAGTGTTATCCTGTGTCCTCTCCCTGCCCAATCCCAGAAGAGGTTGGGCTTCCATGCCTCCAGCTTTCCTGGCCCCTCACTCTCTGTGGGCCCAGGTCCACAGAGTGGGAACTCACTGTCCCTTGTGTCAAGACATTTCTCTTACTCCTGCCGTTCTTCTGGTGCTACTCCATACAGGGGTCAATGCAGCAGGGGATAACCTAGAGAAGGTATTTGCAAAGAAAAAGGCTGAGGAGGAACAGGAGACATTGGAGCTGACTGTTCTTAGTAATTGATAACCTACCAATTGCTACAGAGAAGGATGGAGGTGGGGAGGGCTTTTGTGTAATCCCACCCACCTCACCCAAACTACAAAGGTATGCTGTCATGGTCCCTTCTGGAAGTTTCTGGTGCCATTTCTGAACTGTTACAAACCTGTATTTCCAAACTTGTATTTCTAAAACTGTATTTCCAAACTTGGTTCATGTTTATACTTTGCAATTCAAATAAAGATAACCCTTACTCTGTAGTCTTCTGTGTGCTTGTTTTAACTGGGAAGTGGTTTAATGTAGGTATTTTCTAAGCCCTGACTCTCTGTTGGGCTCTACATCAAGTCTGTTTATACTATCTCAGTATCCCCAACAATCCTGTGTAGGAGCTACTGTTGTCCCATTTTTCCAGAATCAGAAACTGAGGCTTGGAAAGTCTATGTAACTTGCCTGAGGATACCTAGTTGGTAAGTGACAGAGCTGCAACTGGTAATCTGACTTTTATTATTTGTCTTAATACTTACATGATAGCATATCTGAGGCAAGAGAGAACAGACTTTCACAAAGGAAAGGTTGTAACCAAGAAAGACATCTACTCTTTCAGTCAGCAGACCTTGGCCTCAGGGCCTGACCCTACTATGCTGTCTGTGCAAGCAGGCATTGCTCCTGGTGGAAACAGGCACGTTTGACTCCCCTCTCGTGCTCTACATTCCATCTATCATCCATCAACCAATCTTGTCAGACCTATCTTTTGGGTATATGCAGAGTGCAGCCACTTCTTATCACGGCCACCATCATCATCTCAGTCAAATTCGCCATCATCTCTCACCTAGACTTTTTTTTTTTAACTTTTGATTTTGTCTCACCACTTGTGGCGACCTTAGTTCCCTGACCAGGAGTTGAAC EMBV3_32334 CCTTAGGTCTACTCTGAACAACACTTCAAGCTTCCCAGAGACCAGAGCCAGATGTCCCCT Gene GeneID:534253|C7H19orf50:NM_001034605:59_cdna Constitutive 1 NULL GeneID:534253 7 GENE C7H19orf50 C19orf50 MGC127866 chromosome 19 open reading frame 50 ortholog EMBV3_19680 ACCCCAAGTGTAAAGGTTGTGGTACAGATAGTTACTTTGCTCAAACTCAGAAGAGTTGCA Gene BVV0102_123089 + 0 NULL GK000022.2:2828658-2894369 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129559 1 XLOC_078272 NonCoding TCONS_00129559 XLOC_078272 NonCoding NonCoding - 22:2845407-2846077 - TSS96426 670 3 TCONS_00129559_2 46 0.492537313432836 1 0 0 0 0 0 0 0 0 8.82793453076202e-06 0 0 0 1.60105385694592e-05 0 0 0 0 0.000693828056820352 0 0 0 0 0 0 0 0 0 0 0 2.17370253092032e-05 0 XR_229082.1 LOC101902030 PREDICTED: Bos taurus uncharacterized LOC101902030 (LOC101902030), 2e-32 143 72.51 0.422388059701493 0 noncoding 0 0 0 0 -0.300760419996827 0.340928457291493 0.00299321701746878 0.954129100456327 ATTCTCTTTGAAAGTAAGCAGATTCGGCATTGTAGTCATACAGTCATTTTTTATGAGTGAGATATCAGGACTTCCCTCGTAGTACAATGGATAAGAATCGCCCTCCCAGTGCAGGGGAAACGGGTTTGGTCTCTGGTCTGGGAAGATTCGACATGATGCAAGGCAACTAAGCCCATGTACCACAACTGCAAAAGCCCTCACACTCTAGAGCCTGTATGCCACACTAATGAGCCCACAAGTTGCAGCTCCTGAAGCCCAAGTGCCTAGAGCTTTTGCTCAGCAACGAGAAACCACCACAGCGAGGAGTCTGCACCACAGCCAAGAGTAGCCCCGCTCACCACAACTAAAGAAAGCCCCCATGAAGCAACGAAACCCATCGCAGCCATTAATTAATCAAAAAGAAGGAGATATCATCTAGAAATGGACAAGACGAAAGTTGAAATTATAATGTTGAAATACCCCAAGTGTAAAGGTTGTGGTACAGATAGTTACTTTGCTCAAACTCAGAAGAGTTGCATCATCTGGGTTAGTCTGTATTTAAAATGTATGTACTTTCTATAACAACAGTGTTGGAGAGCAAAATAATAATGACAACTTTTTTGTTCGGAGGAACAATCATTATTTTTCTCAGTCACATACAAACAATAAAAGCAATTTCTATTATAAGTAG TCONS_00125802 TCONS_00125803 . 3' 3222 TCONS_00125802 TCONS_00125803 . 3' 3891 EMBV3_36498 CAGAAGCATAAGAACTCGCCTCTGTCGAGTACTGACTTTAAGACAACTGATTCAGAGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17403 CAAACTCAAGTTTCCGGAGCCTCACGTGGTGCTGGAGGAGCTGAAGAAGTACCTTTCGTA Gene GeneID:613525|SELH:NM_001164092:1_cdna Constitutive 0 NULL GeneID:613525 15 GENE SELH NULL selenoprotein H EMBV3_23566 GATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGG Gene GeneID:282691|HMGB1:NM_176612:23_cdna Constitutive 0 NULL GeneID:282691 12 GENE HMGB1 NULL high-mobility group box 1 EMBV3_37655 GTGGGTTATGGAGTTCGGCATGAGACCTTTGCTTGTGAAAGTTTATTAGCTGACTCCAGT Gene BVT0102_100423 - 0 NULL GK000006.2:76667697-78734704 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37343 GGAGGCACGGTTCAGCTCCCTCTGTGTTCCTAAGGTCATTCATCTCATAAATGGGGATCA Gene BVT0102_200686 - 1 EMBV3_41835 GK000028.2:19824540-20403638 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159204 TCONS_00159192 TCONS_00159196 TCONS_00159198 TCONS_00159194 TCONS_00159203 1 XLOC_097371 Coding TCONS_00159194 XLOC_097371 NonCoding Coding - 28:19868644-20025248 - TSS119346 836 1 TCONS_00159194_1 57 0.174641148325359 5 0.994693588245436 0.00120384277849368 0.000259893392509314 3.85949692620523e-08 0.00180259632138585 6.89855482554222e-05 9.29339569990732e-14 1.55421901188111e-12 0.00167952688009356 4.01560035059672e-10 2.05144641893313e-08 2.60923441575112e-25 0 2.74530659784324e-05 0 1.782302467761e-08 0.00056866756598644 0 0 0.000198672822935585 4.67011238457365e-07 1.73903259333069e-08 0 2.35156062286912e-08 1.11307787062793e-08 1.03177240468074e-10 2.28443920047654e-61 3.64347892602691e-06 0 0 0 XM_005212203.1 EML5 PREDICTED: Bos taurus echinoderm microtubule associated protein like 5 (EML5), transcript variant X3, mRNA. 3e-06 57.2 83.33 0.0633971291866029 NM_001278655.1 LOC100506115 Homo sapiens uncharacterized LOC100506115 (LOC100506115), mRNA. 3e-06 57.2 84.31 0.0598086124401914 0 noncoding 0 0 1 1 -0.117963971383896 0.442685400943602 -0.0531040005557951 0.372609523634135 CTCCTCTCTTCGCTGCAGCAGGAACGTTCTGGACCACACCAGGCACAGCCTGGGATCTTCACTGTTTGGTCCTGACATCCAGCCGTCGGCATAATCATGGCCCAAGGACCCAGGATCACCAGATGATCCTCTTGCTGTAGCATCAGAAGGGCAGAAAGCTGGATTTCCCTGAATCCTCTTCTCTCTTCTAACCCTGAAGCTGGGTTAGAGTTCACCAATGAGGACAGATCAGAAAGAAGAGATGAAGAAACTGAGACTCAGAGCGGTTAAGTAACTTCCCCATGATCACACAGAAACACAGGGTTGCAGTGGATGGCCCAGTTCTGGTGATTGGTGTGGTGATGGAGGCTGCAGTCACGTTCGGCTCACCTGTCTCGAACGCTCAGAAGGCTCTACATGTATTACCAACATCCATCCTAAAAATGCTGTCAATAGCTATTTCCCCCTTTCCCTGAGGATCCTGAAATACTTTGCATGTGTTCCTCCCTCTGAAAGATACAAGCTTGGTGTTATAGTTGATCCCCATTTATGAGATGAATGACCTTAGGAACACAGAGGGAGCTGAACCGTGCCTCCATGCAACAGCCTCCTTTCATAGTTCATGTTTCTCTCCAGAGATATAAGAATATATAGAAATACAGAAGCCATATTTATGGAAACACAGAAGAAAACATTTTGAATATCCACTTTTATCAGCACTGCGTTTTTCTACCTCACATGAATCCTTGGGTTCATTTAGATTCTTTACTGAAAACTGCATACCCACGTTAGCTAAAGAAAGAAAATTAAAACCTTTTCAGTTATAAAAATGAGTTGGTTGTCTAAATGTTTTTAAC TCONS_00159185 TCONS_00159186 TCONS_00159188 TCONS_00159189 TCONS_00159190 TCONS_00159191 s 3' 59564 TCONS_00159185 TCONS_00159186 TCONS_00159188 TCONS_00159189 TCONS_00159190 TCONS_00159191 s 3' 59564 EMBV3_34212 AGCTCATCAAGTTCCGAGAGTCGGGCATCGCCTCAGAGTACGAGTCCAACACGGACGAGA Gene GeneID:539686|NOS1AP:NM_001146219:335_cdna Constitutive 0 NULL GeneID:539686 3 GENE NOS1AP NULL nitric oxide synthase 1 (neuronal) adaptor protein EMBV3_01027 CAAGCTCTTTTTAATGACTATGCAGCTGTGTTCTCAGGGCTTAAGTTTCTACCTGTTGCC Gene GeneID:536495|ATP10D:NM_001105628:26_cdna Constitutive 2 NULL GeneID:536495 6 GENE ATP10D MGC160068 ATPase, class V, type 10D EMBV3_42677 CAGCGTGTGGTTTCTCAAGAGGCCAGAGCGTAATGTCATTGCTATTTTTTTAACATCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06774 GCTTCTATGCAGAGTCCTGTTTCCTGTTCGCCCTAACACACCAGAAGCTCCCGCCCTTTT Gene GeneID:532871|FOXRED2:XM_002687686:55_cdna Constitutive 0 NULL GeneID:532871 5 GENE FOXRED2 NULL FAD-dependent oxidoreductase domain containing 2 EMBV3_37198 GTACAGGCCCGTGAAGGTCAGGGGGCACTTTGACTTCAAGAGCACAGTCCCTGGAGGGCC Variant GeneID:100139115|SURF1:XM_002691662:409_cdna 422^787 4 EMBV3_31234 GeneID:100139115 11 GENE SURF1 NULL surfeit 1 EMBV3_26399 TAGGCAAGTCATACCTCCCTGTGCCTCAGTCATTCTGCCGTCCTAACAAAGTCGCCTCTG Gene BVV0102_181862 + 0 NULL GK000018.2:35844345-35847626 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086122 TCONS_00082997 TCONS_00086123 TCONS_00082996 2 XLOC_052047 XLOC_051157 Coding TCONS_00082997 XLOC_051157 NonCoding Coding PRMT7 18:35844010-35847608 j TSS62483 3002 3 TCONS_00082997_7 76 3 0.166249652488185 6.74913096398284e-251 1.10276160355043e-186 3.43399443880706e-06 0 2.27975723930921e-08 1.17400834344938e-182 1.09800413530752e-05 1.52952087602417e-189 9.81654396986951e-76 0.000204259961554641 0.000151612094236825 2.35666319040681e-08 8.30732259251354e-97 4.30434353114842e-66 0 0.00186318113675686 0.0013030005212486 0.00142400155808911 0 1.13880534239068e-15 0 4.93421533764782e-101 0.00123089426800249 8.79604833602649e-29 1.66291200511121e-12 0 4.44461065875864e-11 0.000220535040418958 7.96975151288042e-05 0.000120072552922119 XM_005218563.1 SMPD3 PREDICTED: Bos taurus sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) (SMPD3), transcript variant 0.0 3552 100.00 0.655562958027981 XM_005256031.1 SMPD3 PREDICTED: Homo sapiens sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) (SMPD3), transcript variant 7e-123 446 77.59 0.191872085276482 0 noncoding 0 0 0 0 -1.96876236828591 0.00802229371993847 -0.0954380171257257 0.173311186178203 CATCCAGCTCCGAACAGCAGCTTCTCACTGGGGACTGTTGCTGGAACCCCCATTGTAAGCAGGCCGTGTACTTCTTCAACACCACACTCGACCCCAGAGCACCGCCGGGCAGCTCGCAGACCGTCACCTACACTGTGGAGTTCCACCCCCACACTGGAGACATCACCATGGATTTCACGCTCTCAGATGCGCTGGACAGTAATGGCCCCAATCCACATTTGTAAGGGTTTGGCCTCTGTGTGCAGCAGCATCAGGTGACCAAGACCAGCACCTGGACACCAGGCTGCTCTTCTGAAGTCAGGGAGGAGGCTGTCCCAGAGCAGTTCAGACGCAGATCCAGGATACCAGCCGGCAGAAGGAGGGAGCCTGAAGGTACAGCCTTTTCCCACGTGCCCCCTTCTAGCAAAAGGACCTCATCCCCCAGCAGTCTGGGCAGATGGGTACTAGTGCAGGCACCCCAACTTCACCTTGCCAGAGAAGGGCAGGGAGTCCCAAGGAGGCCCAGCCTGATTTCTTCCCACACACAAGGTCCTGTTCTGCTGTTTACTCTAGTTCCAGAGGGAGTGAGTAAGAGAACCCAAGTGGCCTGGTTTTTGAGTGGTTCAGGGCAGACTCAGGCTGTGCTCATCCCATGGGGAAGGGCAGGAAAGGTAGGCCCTCCATGGCAGACTCCCCATAGCCCTGCCTGGCCACCTTGCCTGCTGGAGCCAAAGCAGGGTCCAGACCAGCTTTTCACTCAAATAAGTGCAGAACACCAGCCTTGAGCCTCACAGTTTTATTTTTTTTCCTCATTATCCATCCTTCTTTTCAGCACCAGTAAAGGAAAAAAAAAAAACACTTCTCTTTTCAAAATACTTTATCAGGTGTAAAGATTGTTTTTCTTCTAGGGAAGAATTGTTTGGATAATGTATTTGATAACATTTTTACCAAAACCTTAGGTGTGCTTACCATAGAAAACCCCTAATGTCCCATGAGGATACAAGACAGAAAAAAATACAGAAATTAAAAAAGTGTTTTTTTTTTTTTCTTTTTTAAAACAGTATTTCTAAATTTCAGCAAGTTAATACAATAGTTAAAAAGCATCAAGATTAATACCCATACTTAAAACTGAAGGTGGTTTGGACAGATGAAGTGACCGTTTTTCTCTGAAGCTGACCTCTGGCCTCCTGGCTTCTGTGGAGGAGGCTGGGCCCGGGCAGGTGCAGAGCCTTGGGGATTTAGGTGACACCTGTGTCCGTCCTTCCAGGCCTAGATGCCACAGAAACATCTGAGGTGTTCCTTTTTTAAAAATCGAAATGGAAAAGTCTGGCTTGTACACAGCCCCAGGGGTGCACAGGTTTGATGAAACTCGTGGCTGAGCAATGGCGGCCTCAGCACTGGAGGCCCCAGAGGGCGGCGCAAGGGGAGTGGGGAGGCAGGCAGGCCCTTCTCTGGAGACCGGGCAGGCTGGGCAGAGGCGACTTTGTTAGGACGGGAGAATGACTGAGGCACAGGGAGGTATGACTTGCCTAAGGCCGCCCCATGAGTAGGGAGAGAAGCATGTGCCCCGTGCCCTGGCTCCCTTCCAGCAGCCCCTCTGAGGGCTGGAAGCTGTGCTAGAGTCATTCCACTTCAGGAGCCAGGCCCTGCCTCCGCGGCTCTCCTGGGCACACAGCTGGCCCACAGCCTGGAGCCTTGGCTCTGGCCCAGACGTCTGGGTATCACATCTGCCCTGTTGAGCTCCACCTGAGAGCAGATTTCTGGCCGCTCCTAGGATTGGAGGCCTCTGACCCAGGGAAGCCTAGCCAGGGCCCCAGGAGCCACGGCCCTGGAGGAGCGGTGCAGTGGAGAGCCAGGGAGGACTGTACCCTGGATGGTGAGCTGCCCTCTTGGCTTGATGTGGGAGGTGGGGCTGAGGGCCTGGCCAGGGGAGTGCTCCAGGCAATGAAGCCCTCTGCCCAGCTGCTGCCCTGGCCAGGGGGCTTCAGACCAGCCCGCACCGCCTTGTGTGCAGCTCTTGGGAGTGTCCCCTCCAGTGCAGGGCCTGGCCTCTGACCTTGCCCCTCTTGGTCCCTCTTGCAGCTCAGTGGGTGACAAGGCACAGCGTCAGCATATTGGCACCAGGAGGCTCCTGGTAGCAGAGTCCTGGTACGTCCCCAGCCTCGGGCAAAACTGGCTTCAAGCCAGGTGGCACGTTGGTTGGGGCGCTGTGAGGAGGGGAGATCAGTGGGGGGTTGTTAGTAACCCCCTGAATTGGAGGGGCCTTGCACCTGGAAATAGACAAAACCCTCCCTGTGTGACTGGGGGCAGGGGGCGTCCTCAGGTGTGTTTAGAAAGGCAGGTGGGCAGAGGCAGTTCTGCCGTGGGATGAGGAGCTATGGGCTTCCCCTGCAGGCTCTGCCACACTGCACAGGTACCCGGGGCTGGCCCTGGTTGCATGGTGGCAGACTGGATGCCTGTGCACCTGAACACCAACCAGTACTGCTCCCTGTGTGGGACGAGCAGTGGCCATCAGCCTTGCCACCCTCAGGCTGCACACTGGTGAGGTGACAGGCTGCTCTGCGCCTTGATCCCCAAGTCCCTTCATCTAGGGCTGGGGTCACTGTGGAGGATGGGCCTAGGAGGACAGAGCCACAGCCCGCCCCCCCCAGATGCAGGGGGACAGTTCCTGAGCTCAGCCAGCACGCGGATAGGGACAGTCACCAAGGGAGGATTGGTCCTGAACCAGAAGAGTGTCCAGACGGGAGACAGGATCAGGCAGAAAGAGAATGTGTTGGTTCTGACAGAACAGAAGCTACAAATCTTACCGTTTTCAAAACAAGAAGTCCCCCTCCCCCCTTAAACCGTGAGTGGTCCTTCTTCCTGTAAAAAAAAGGATGCTTTCTCTTTAGAATCCTGTCTATGGCTCCATGGCCCACGTTGGAGTCTCCAAGGGAGGCCCCGGGCTCTGCTGTGCCAGGGGAAAGGAGCCCCTTTCAGGAAGAACAGTGTTCTCCCTTGTGGCTTGCAGACCCTTTAAAATG EMBV3_24670 TCTTTGGCTGAGTGATCATCCTGTTCCCCACGACGTCTTTCTGGTTGGTATCGGGTTTGT Gene GeneID:497030|C3orf39:NM_001011682:38_cdna Constitutive 0 NULL GeneID:497030 22 GENE C3orf39 NULL glycosyltransferase EMBV3_32531 GAAGGACTATTAGGGAGGGCAAGACCTGATGAGGCAAAGAGCTACCCAGTATTTCCAAGG Gene BVV0102_280123 + 1 EMBV3_42525 GK000005.2:25799054-25802666 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191131 TCONS_00191132 1 XLOC_116817 Coding TCONS_00191132 XLOC_116817 Coding Coding ITGA5 5:25790648-25800796 j TSS143276 4676 1 TCONS_00191132_4 604 0.029940119760479 18 0.540948063467035 2.8363556252631e-16 5.08463654025127e-11 0 0 2.40077933576628e-09 0 8.83325177378567e-05 1.95579555637746e-09 2.93453053777844e-05 3.25703091262479e-09 2.65072669306952e-09 2.04759822978109e-05 3.15409862031362e-10 3.50601594147966e-09 2.51680719259462e-11 0.00369741270955623 5.0674387473836e-09 0.0124004335500653 1.98828310915656e-10 3.46525332123925e-09 1.1545046808514e-09 0.000879259903655459 4.7383861966982e-05 0.00440829230310116 1.48552329443916e-14 3.29757402917685e-09 0 0.000182440356770535 0.000597788028907658 1.31707958670008e-05 NM_001166500.1 ITGA5 Bos taurus integrin, alpha 5 (fibronectin receptor, alpha polypeptide) (ITGA5), mRNA. 0.0 5003 100.00 0.593028229255774 NM_002205.2 ITGA5 Homo sapiens integrin, alpha 5 (fibronectin receptor, alpha polypeptide) (ITGA5), mRNA. 0.0 3470 87.88 0.590034217279726 TCONS_00191132_4 sp|P08648|ITA5_HUMAN ITA5_HUMAN Integrin alpha-5; 0.0 1071 92.41 0.980132450331126 1 coding 1 1 1 1 0.031128373515971 0.824512287343351 -0.0115847095219601 0.879815752283356 CAAGACCTCCCAGCGTCTCCTGGAGGATTTTAATCCCAATGTCTAGACCTTGGGGCTTGAAGAGTTTAGCATACTGGGAATGACAGATGGGAAAAATAGGATCCTGGGTCCTGGGGTCTGGTGGTAGAGATTTGAACTCCTGGACTCCTGGCCTGCTGACTGATCTGATTGTGGGGTCCTTTGGTGTAGACAAGGCTGTGGTATACAGGGGTCGCCCCATCGTGTCTGCCAGTGCCTCCCTCACCATCTTTCCTGCCATGTTCAACCCAGAGGAGCACAGCTGCAGCTTGGAGGGAAACCCTGTGACTTGCATCAACCTTAGCTTCTGCCTCAATGCTTCCGGAAAACATGTTCCTGACTCCATCGGCTTCACGGTGGAGCTCCAGTTGGACTGGCAGAAGCAGAAGGGCGGGGTGCGGCGGGCGCTGTTCCTGGCCTCCCGACAGGCCACCCTGACCCAGACCCTGCTCATCCAGAACGGGGCTCGGGAGGACTGCAGAGAGATGAAGATCTACCTCAGGAACGAGTCAGAGTTTCGAGATAAACTCTCCCCGATTCACATCGCCCTCAATTTCTCCCTGGACCCTCAAGCCCCAGTGGACAGCCACGGCCTCCGGCCAGTCCTACACTACCAGAGCAAGAGCCGCATAGAGGACAAGGCTCAGATCTTGCTGGACTGTGGAGAAGACAATATCTGTGTGCCAGACCTACAGCTGGAAGTGTTTGGGGAGCAGAACCACGTATACCTGGGCGACAAGAATTCTCTGAACCTCACCTTCCACGCCCAGAATGTGGGTGAGGGTGGCGCCTACGAGGCAGAGCTTCGGGTCACAGCCCCTCCGGAGGCTGAGTACTCGGGACTCGTCAGACACCCAGGGAACTTCTCCAGCCTGAGCTGCGACTACTTTGCTGTGAACCAGAGTCGTCTGCTGGTGTGTGACCTGGGCAACCCCATGAAGGCTGGGGCCAGTCTCTGGGGTGGCCTTCGGTTCACAGTCCCTCACCTCAGGGACACGAAGAAAACCATTCAGTTTGACTTCCAGATCCTCAGCAAGAATCTCAACAACTCGCAAAGCGACGTGGTTTCCTTCCGGCTCTCGGTGGAGGCTCAGGCCCAGGTCTCTCTTAACGGTGTCTCCAAGCCCGAGGCAGTGCTATTTCCGATGAGCGACTGGCATCCCCAAGACCAGCCGCAGGAGGAGGGTGACGTGGGCCCTGCTGTCCACCATGTCTATGAGCTCATCAACCTGGGCCCCAGCTCTATTAGCCAGGGCGTGTTGGAGCTCAGCTGTCCCCATGCTCTGGATGGCCAGCAGCTCCTCTACGTGACCAGGGTCACAGGACTCAGCAACTGCACCACCAGTCACCCCCCCAACCCAGAGGGCCTGGAGTTGGATCCTGAGGGTTCCCAGCACCACCGGCTGCAAAGACGGGATGTTCCAGGTCGGAGCCCTGCCTCCTCAGGGCCTCAGATTCTGAAATGCCCAGAGGCAGAGTGTTTCAAGCTGCGCTGTGAGCTGGGGCCACTGCACCGGCAAGAGAGCCGAAGTCTGCAACTGCATTTCCGTGTCTGGGCCAAGACCTTCCTACAGCGGGAGCACCAGCCATTTAGCCTGCAGTGTGAGGCCGTGTATGAAGCCCTGAAGATGCCCTATAAAATCCTGCCTCGGCAGCTTCCCCAGAAGGCGCTGCAGGTGGCCACAGCTGTGCAGTGGATCAAGGCAGAAGGCAGCCACGGAGTCCCTCTCTGGATCATTATCTTAGCCATCCTCATTGGCCTCCTGCTCCTCGGTCTGCTCATCTATATCCTCTACAAGCTCGGATTCTTCAAACGCTCCCTCCCGTACGGCACCGCCATGGAAAAAGCTCAGCTCAAGCCTCCAGCCACCTCCGATGCCTGATTCCTCCCAGTCTTGAAGGCCCAGTCCCCCCACCCTCAGTCTACTGACAGGGAGGGGGCTGGGCGCTTCCTGAAGGTGCTGAGGGCCAGGGAGAAGCTCCTCTCCCCAGCCCAGAGACATACTTGAAGGGCCAGAGCCGGGAGGTGAGGAGCTGGAGATCCCCTCCCCCCATGCACTGTGAAGGACCCTCGTTTACACATGCCCTCCTCATGGATGAGGGAACTCAGATCCAGGGACAGAGGCCCCAGCCTCCCTGCCACCTTTGCATTTTGGAGAATTTCCTGAAAACACCTTGGAACCAGAACTAGGGGATCCAATCCCAGTTCTCCAGCTCAGATGTGGCACCAGGACTTCCTGTCCAGCTCCAATCCCGCAGAGATCTGTCGCCGGCCTTGCCAGAGATCCACAGGAAGCCCCCAGCTAAGAGCCTGGAACCTGGGGAGCGAGACATGGCAGCTCTGGACAGCCCCCACCCCGGTGGGCCAACAAAGAACACTAACCATGGACGGCACCCCAGGCCCAGCTCAGGACAGATCCCACACCAGGATCCATGCTGGCCCAGAAGCAGCTCCAAGGGGAACCAGAACTTTCACAGGGCCAGATCGAACCTGGGGCCTCTGGGGCCTGAAGTTCATCTGGGACCCAGACTCAGACATTGGTAACCTAACTAGGCAGATCCAGGACATTTGAGCCTGCTCCAGACCTGGGCCTGGAGACCAAATCCACCTCTGACTCAGGAGAAGTCAGGAATTGCCCAGGACCCTGAAGGGGCCATGATGGTAACAGATCTGGAACCTTAACCCTGGCTCGACATAGGCCCTCTCAGTCCTCCACAGAAAAGGGAGCCTGCTGTCCCGGGCCTGCGGGTTTGGGTTCTGCCCACCAGCTGCACTGACGCTGCCCCTCCTCTCCCTACCCAACCCTCCCCTCACCTCGGCTCCGGACACCCGGGACTTATTTAAACTCTGTTGCAAGTGCAATAAACCCGGCCCGGTGGCCCCACTGATCAGAGCTGGAATCTGTCCTCTCCCTACTCTTTCCAGATCTTTCCTGGAACCAGACCTCTTGGTGGGTAGGAAATGTTTCTTGGAGTTTGTTTTCACTGGGAGCCAGGAGTATGACCCCCAGGAACTGTGGAACTAGTTTTGGGGTTACCTTTTCTTACATGGAAGGGGTGGGCTTGACTCCTGCCCATCCTCCAGCCCCACCAGATCTGATCCCAACACCTCTAAGAGAACAGGGAAAGGAATTCCTTCTCTTTGGATTTGAGAGTTAGGGAAGAATACAAAAGGAGAGGTCAGAGCCGAAGGTGGAGGAAGATGGCCCAGAAGATTCACTTGGGCTTCCAGAAATTAGAATAAGGAAAAGGGTTGAGAAAAAAGGCCACAGAACTAAATCAGAAGAAAGCCAGTTGGGTTTGTGTTTTGTTTTCATTACCCATTGTATTCCAATGGGTAGAGGGAATGTTAAATAGTTTACATACATTATCTCATTTAATTTCTATCAAATTAAATGTGCAAGGCAGGCACAATTAACCCCATTTACACAAGGGGAAATTGAGGTCCAGAGAAGTTATGTAACTTGCCCAAGGTCACAGAGTCTAATTCAGCCTTGCCTGACTGTGAAAGCCCATATTCTTAACCGACATGACAGACGGTTCAGGTCTTTGAAGATAAATTAAAGTGAGGGAACCCCTCAGCATCCTCTGTCTCCTCGAGGCCTATCTTAAACTAATGTCCAGCAAGAGCATGGGGAAGGGTGCTGAAATTCAAATGGACTGTTAGAGACAAAGGTGTCTATGTCCTGCTAGACTGAGGTCAGCCACCAGAGGGCAGCACACTCACAAATTTATGGGAATTTGGGGAAGGGAGGCTATGTATGAGGTCCTCCTCACCCTCTTCCCCCATCAAGACAATAGTTATTAACTTAGGCTCCTGCCTCTCAGTTCCAGCATGATCTCAAAATATCTCTCCTTGGAGTTCAAAGCTGCTCTACACTCCAGTCTTCCAACTTCTTTATAATTCTGTAACTCAGAAACTTCTTCCCAGAACCCATAAATGAAGGACTATTAGGGAGGGCAAGACCTGATGAGGCAAAGAGCTACCCAGTATTTCCAAGGATGACAGCTGTGGCATAGCAAGGCACTGAGACTTCTCCAAGAATGAAATCCCATACTTGCCTTCTTGGGAGATGGGTGGGAATGGCAACAGCCACACTCCAGGGGCCAAATCTGAGATTTCTTACACTATGATGAGGAGGAAATGAGGAGGGGAAGTGGGCTGTATTGGGCTGGTATCATGGGTGTGTCTGTGTAGTTAGTGCCTGTACCTTTGAGTCTCTGAGAGTGACAAGGTCTCTCTCAAGGAGGCACAATACAATGTTGGAATTCCTTGGGTTCTGAAGTGCTGCAGATGTAACCCAGCACCAGTCTCTGTCGCTGAACTGTAATTCTCAGGCTCCGGTCTGTTTCCCCTTCCGAATCTCCCAGCCCCTCCAAAGCATGTCTGCCTCTCATCTTGAGACTTGAGTGATGCAGAGAGACAAGAGAGCAGGGGGAAGGCCAGAGTCCTAGCCCTGTCTGTGTCAGTGGAGATGGAAAGGAGGCCTGGGACGGGAACAGCAGCTGGGGGTGCGTAAGGGGGAGGGGGCTTAGGAGAGGCAGCTGGCAGGCGGGAAGCTGATCTGGGGGTCTCAAGTTTCTTGACATCAATTAGAGCAGCCGGCCTGGGCTCATTAGTAGCCCGGGGTGCAGGGCTCATCAATAATGAATTCACC EMBV3_17844 CTGGGAAGCTGGTAAGGCCAGGCATAGAAGAGGCGGTCAGTAAATGTTTTTCCCAAACAG Gene GeneID:100335527|LOC100335527:XM_002696771:454_cdna UTR3_Alt 2 NULL GeneID:100335527 21 GENE LOC100335527 NULL hypothetical protein LOC100335527 EMBV3_08566 CTGGTGATGATGGAAATGTTGGACCAGGGTCAAGACGAGGAAGTAGCTTTGGAGGACGAT Gene GeneID:510631|LOC510631:XR_083715:46_cdna Constitutive 0 NULL GeneID:510631 7 PSEUDO LOC510631 NULL similar to Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 / hnRNP B1) EMBV3_37192 CAGAGACTAAGAGAAGTCGGGAGTGCCCTGGCCTTCATCTGACTTGATTGACATCTTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10281 TGAGTTCCTCTTGCTTTGGGTCTGATGTGAGCATGTTTTCCTGGCTACAGTGCTAAGGCG Gene GeneID:615570|KRT82:NM_001082616:57_cdna Constitutive 0 NULL GeneID:615570 5 GENE KRT82 MGC155159 keratin 82 EMBV3_31110 GGGTGGATGGTATATTTCTATGGGTGGGTCTAATTTGGTAACAGTTTGATTGTGCCTGGT Gene GeneID:540904|SMARCA2:NM_001099115:8_cdna UTR3_Alt 2 NULL GeneID:540904 8 GENE SMARCA2 MGC148877 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 EMBV3_02355 CCGAGGCCCCCGGTGTACGGCGGCTGAGAGCAAAAGCAGACATGTGTCAGTTTAAATTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42136 TGGACCTGTTTCTACTCTCAGGGAGCAAGCCCCGTTGAAGGCCCGTGTTGTGGACCGGGA Gene BVV0102_089903 + 0 NULL GK000019.2:52727753-52738337 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38667 ACTGCACTGAGGAGGATCTGTTTGGGTGTGACAGGAAGAAGATTTACAGGACGTCTGAGG Gene GeneID:517887|CYTH4:XM_002687692:72_cdna Constitutive 0 NULL GeneID:517887 5 GENE CYTH4 PSCD4 cytohesin 4 EMBV3_37721 GTTTCGCCAGTGGACCCTTGGAAAAATCAGGCATTCCGAAATGAGAGTAGGACCAGTTCC Gene GeneID:530962|MPHOSPH9:NM_001099048:216_cdna Constitutive 0 NULL GeneID:530962 17 GENE MPHOSPH9 MGC166162 M-phase phosphoprotein 9 EMBV3_07828 CACGACCCAGTTCATGTTTTTGGTTACTTCATATCTGTGAGGGTAGGGCAGGAACACAGG Gene BVT0102_142871 + 0 NULL GK000009.2:96314640-96420851 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17887 TGGAGAACTACAGCAACCTTGCTTCAGTGGGGTGCCAGGTGGGCAAACCCAGCCTCATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42055 CAATACCAGGCCAGATGCTGTTTTTGCTGGTGCCATGCCTACAATGGCAAGTGTCAAGCT Gene GeneID:524676|DPY19L2:XM_002686819:69_cdna Constitutive 1 NULL GeneID:524676 4 GENE DPY19L2 NULL dpy-19-like 2 (C. elegans) EMBV3_14855 TGGTTAGTCAGCCTGTTTAACATTACAACACAGGCAAATTATGTTCATTGTTGAAGATTG Gene BVV0102_315623 + 0 NULL GK000001.2:117253809-117484277 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010489 1 XLOC_006040 NonCoding TCONS_00010489 XLOC_006040 NonCoding NonCoding - 1:117460851-117461104 - TSS7566 253 0.201581027667984 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000252097143628273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XR_250024.1 LOC101928714 PREDICTED: Homo sapiens uncharacterized LOC101928714 (LOC101928714), misc_RNA. 5e-10 68.0 88.46 0.201581027667984 0 noncoding 0 0 0 0 CAATGTGATGGTTTAATATATGTATACATTGTGAAATGATTCCCATAATCAAAGAATAAATTTAATTTCTGTAGTTTTGGAATCTATTTTACAAAAGCAGTAAGACCCAGAATGACAGTTCTTACAATCTTCAACAATGAACATAATTTGCCTGTGTTGTAATGTTAAACAGGCTGACTAACCATAATTTAAGGATTAGACAAAACTAGAAGGATAGTTACTGTAATGTATTATAGAATTAAGACTTTAAACA TCONS_00001904 . 5' 70493 TCONS_00001904 . 5' 70493 EMBV3_30882 TACCACGTCCACGAGTGTGTTTAATCAGCACCAAGACGATGAGGGAACACGGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_17874 AGGTGGCTGGTCACCTGGCTGTACAGAGTTCTAGCTGGGGAAGGCATATCATTTATAGAC Gene GeneID:539902|ARHGAP24:NM_001102234:28_cdna Constitutive 0 NULL GeneID:539902 6 GENE ARHGAP24 NULL Rho GTPase activating protein 24 EMBV3_02417 AGCCATGTGTGGCTACTGAGCATTGAAAATGTGGCTAATCTGAGTTGAAATGTGCTACAA Gene GeneID:787180|CT47B1:NM_001099202:35_cdna Constitutive 0 NULL GeneID:787180 X GENE CT47B1 MGC152348 cancer/testis antigen family 147, member B1 EMBV3_39714 CCTGTTAAGCATTTGAGAGGACTGAAATACTGGTTTTCATGGGCTAGAATTAAGGCTCTC Gene BVT0102_277586 + 0 NULL GK000013.2:57864634-57866137 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41640 GAACATTAGGGATGGAACGCACTTGTTTTCTCTTTTCTCTGGCGGGTTGTCGGACGTCAC Gene BVT0102_376499 + 0 NULL GK000030.2:146843116-147553897 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26026 GACCGGTGCAGCAGCGGCAGCTCGAGCAGCGCTTCCCTCCCGACACCCCCTGAAAAGGAT Variant GeneID:767832|GOLGA7B:NM_001076954:255_cdna 562^936 3 EMBV3_10268 GeneID:767832 26 GENE GOLGA7B C10orf132 MGC142751 golgi autoantigen, golgin subfamily a, 7B EMBV3_28449 ATTCACAAAGCAGGCCTTTGGACTCGGACTGGAAATTTATACCACCGGCTTTCCTGGGTC Gene BVT0102_054806 + 0 NULL GK000004.2:20233815-20288481 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180988 TCONS_00180990 1 XLOC_110516 NonCoding TCONS_00180990 XLOC_110516 NonCoding NonCoding - 4:20239464-20249930 - TSS135596 2436 4 TCONS_00180990_1 66 0.583743842364532 3 0.767510750119446 0.000545801125156008 8.35672485358983e-09 0.000216760513341613 4.83159816215119e-09 1.69213325310841e-08 1.19880570832362e-08 7.18797263188699e-05 1.98752156014907e-08 2.67156386082021e-08 0 0 0 9.34682339979293e-09 5.04907681140188e-11 0 9.29968664979424e-08 0 0 0.000127307338562686 0.000342916951594843 2.38824025143359e-11 0 0 5.36420606800575e-08 0.000234795379775189 2.47377274441607e-08 1.73970736555939e-07 0 0 0 XM_005223069.1 CCR9 PREDICTED: Bos taurus chemokine (C-C motif) receptor 9 (CCR9), 1e-60 239 91.62 0.0681444991789819 0 noncoding GCAGATCGGACACAACTGAGTGATTCTCAAAACAGGCCTTTGGACTCAGACTGGAAATTTATACCACCGGCTTTCCTGGGTCTCCAGCTTGCAGATGGCATATTGTGGAACTTCTCTGCCTTCCTAATCACGTACCTGGAATGGACAAGAACTCAACAATTTTTTGAGCAAATTATACTACCAAGGAACTTGCAAGTCTAGTGTGTAAAAGTTTGATAAGAAACCATCTCCTGAGATTCTAACCCTGTATCTGCAGAGAACTGAGAAACTTGGGCTGCATTCAATTTCAACCCTGAAACTCCTTGTCTATCATTACATCTAAAGTGAAAAGAGAATATGCTTTCCAGTGTGCACTGTAGAAGTGTCCCAGGGATGATGGATAAAGAAGAATTTCCTAAAGGACAAAGCCAGTGGACCACAAGGACAGTGGATTGGGGGTTTCCAAGAGGGCTGAGCCGGGAATTCATCAAGGAGCCCACTCCAGTGCCAGCGAGGGGAGTCTGCAATTGCTGCCCAGCAAGATTTCCACATTGCTAGAGACCAGCTTCTCTGTGTCATTTATATCCTTCTCTTTTCCAAGTAGGAATTTTATTACACTTGTCCTGGTTCTGTTGCACTACTGTATCTTGTGTTTTCGTGGGAACGTGGGGGCTGTGGGAAGTGGCAGGGAAATTATCTATAGTTAGTCCATCATAGAACCAGATGACGCTTCCTCAGGACTCATGGAAAGAATTTCACATCACGTAGGAATTCTAGGTTTTGAGCTGAACTGGGTTGGACTCTACATTGTTCACCTTTGGAAAAGAGGTGTGTCAACATGGGGTAAAAGAAGCAAAAAAAAAGTTGAGTTACACCCAAATGGGTTATGGCAAAAGCTGCCAAGTGTCCCTAGTATCACTACCTCTTAATTCCTTCTAATCCTAGAAGCCACCAGAATTTTAGCAAATATATACATGGTCCAAGTAGAAATGAAATTTCTAAAAAAAAAAAAAGAAATTTCTCAGCCTCACTTGGAGTTGACTGTGGCCATGTGACTCAATGCTGACATTTACCTAATAAGACGTTTGCCTAAGAAGTCATCTTATGGGCTTCCCTGTGGTGTAGTGGTTAAGAATCTGCCTGCCAATGCAGGGGACACAGTTTGGATCCCTGGTCTGGGAGGAGCCACATGCTACAGAGCAGCTAAACCCACGCACCACAACTACTGAGCCTGTGCTCTGGAGCCCAAGTGCCTAGAGCCTGTGCTCCACGACAAGAGAAGCCACCGCATTTGCAACAAAGTGTAGCCCCCACTCACTGCAACTAGAGAAAACCTTCACAAAGCTACAAAGATCCAGTGTAGCCAAAAAGAAATTAAAAAAAATTTTTTTTTCTTTCTAAATTAGTCTTGCTACAGCAGCTTGACCCGAACATTAATAATGATAGCACTTCCCCTGCACTCAACAAGAATGCTATAAGAAGCCATCTAGCTACTTCTAGGAATAATAATGGAATACAAAATAAAACCATATATATTTATAAGTATTAATATCTTATGTTGTTCAGTTGCTCAGTCGTGTCCTACTCTTCGTGACCCCATGGACTGCAGCACGCCAGGCTTCCCTGTCCTTCACCATCTCCCAGAGCTTGCTCAAACTCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTATTGCCCCCTTCTCCTCCTGCAAGCTTAATTGTATATTTCAAGGCTACTGAGAAGAAAATGTCTAAAGAAAACTTCTTCATGAAATTAGTAAGGAACAAGTTTACTGGTTCAATGTAAGTTGTATTTAAGTCTCTGTAGTTTAGCAAATGGCTTTTCTCATCCCAAATTTCAGCATAGGCCTAGGCAAATAGCTGGGTCTCAGTTAATATTCACTGAATGGAAATCTCAAAAATGGGATTTGGGCAAGATGATAAAGTAGAATGATTTTAGAGCCTAAAATTATTACTTAATCCTGTTGCAAAAGTTTAAACCTGCTTGAAGGAGAGAGAAAAAAACCACAGCTGTACAATTTCTGTATGCATCACAGCAAAAGCATATGCTCTCAGAAGGCATTAAAAGAAAAATACAGTATGCTTTATTACATGAAACTGTGACATACATAGTACCCCAAACTGGAAAACCTAGAAATTAATATGTAATACATACAGCTAACATTATTGCTACACAAGTACTAATTTCTGTCATTGAAATGGCACTCTTAAAAATCAATAGTCAACAGTCAAAAGATAAGAAGAGATAGTCCACAGAAAAAAATGAAAATGACCAATAAATATGGAAAAGATGTTCTATGACACTCATAATTTAATGAATTCAAAATTAAACAGGAGAAACATATTTTTTGTCCATCTACCAAACTGGCAAATGTTAAAATATCAAAATGTTAGTGGCCATCAGTGTATAGGGACACAGGTTC TCONS_00180985 TCONS_00180986 s 3' 5651 TCONS_00180985 TCONS_00180986 s 3' 5651 EMBV3_15478 AATTCCACTCCAGTCTGATGGTGCTCCGCTTCGGCCTCAGCCCCTGCCCCTACCAAAGAT Gene BVV0101_013977 + 0 NULL GK000022.2:49950053-49951082 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127120 TCONS_00127121 TCONS_00127119 1 XLOC_077573 NonCoding TCONS_00127120 XLOC_077573 NonCoding NonCoding LOC100848733 22:49950267-49952608 j TSS95155 2073 3 TCONS_00127120_6 65 4 0.115811965811966 1.32891244963819e-27 1.18661692319017e-07 2.23481289036642e-08 9.21006329211836e-05 0.000298440862908376 3.27853708378827e-05 4.03980484002677e-05 0.000269930298326082 0.000172444508353534 0.000181494661865578 0.000166608479692282 1.15080440221024e-05 1.5991740402893e-114 8.13486934787152e-15 0 0.000635880246727273 0 0 0.000373828088885477 0.000397000155358694 1.29057316684764e-05 0.000130364000093459 0.000228003306550998 5.66536460692385e-05 0.000346550016035788 1.00907613027116e-08 0.000180944611606973 2.09539276953789e-05 1.74340135733454e-05 0.0001049628356697 XR_239446.1 LOC100848733 PREDICTED: Bos taurus uncharacterized LOC100848733 (LOC100848733), 0.0 3036 100.00 0.811384466956102 NM_004947.4 DOCK3 Homo sapiens dedicator of cytokinesis 3 (DOCK3), mRNA. 0.0 863 84.35 0.376748673420164 0 noncoding 1 1 1 1 -0.187746601980684 0.450987202370915 -0.00110733281803223 0.984113588927122 GCTGCTCGCAGGAAGAGGCCGCAGAGGCGGCGGAAGCGGCTCAGTCGCCATCTTTGGTAGGGGCAGGGGCTGAGGCCGAAGCGGAGCACCATCAGACTGGAGTGGAATTCGGCCGCTGCCCCGCGCCTGCTCAGTTGCTCTGTGTACCCTCTGTTCTGGGCCCCAAGTCCTCCCGAAGAACCCCACGGACTTCTCTGCTCTGGTCCCGACTCGTGGCGGACCACGTGGGCTGGGGAACCGCTGAAGAGAGTCCGGATTGCCCCGACAGGTCGACAGGAGGACCCAGTCGGGGCGGACAGATGTCGGGTAGGAGCAGGGCCCGTAAGAGGGCCCAGAGCTCAGAGGGGCGCCCGGGCCAGGATTGGTTGCCTGGCTTCGAGTTCGGAAGCATCCCGCCTTACTGGGGAGATTGGCGGCTTCGGAGCTGAGCGCTCTGCCCCCTCGGCTGCCCTCCTTTCCGGTGCAAGTCTTGGCTCTCTGTGCTTGAAGGCCGGACGTGGGAAAAGTTGGCACTGTGCTCAGGACGGAAAAGATTTTTATGGGGCTAAAAGGGCTTGGAGCCCAGCGACAAGGGTTGGAGGGGGGCACTTTGCGGCTGCTCCCATTCAGTGAATTCAGTGGGTCAGTATCAGGTATTCATCTTTAATTCACATAACAGCAGTCAAGGGAGTGGGGAAAGCGGGGAAGTCAAGTGGCAGATATTTACATCTAAAATTCACATTACTTGCTGGATTGAGAACATGCTACCACAATATATACAGTAAAATACTTTTTTGGGACACTAGTACAAATTTTTTTTTTTTTTTTCTTTTAACTTTGCTTTCTGATACAGGTAAGACCATTAAGTCACTTCTTATTTTAAACATAAATACACAAAAGAAATGGTTAGAAGTTTTCTTATTTTAAATAAGCACAGAATGCCAGAGGTTAAAAACACATTTATAGGGCTGAATACCAATTGGACAGCACACTCTATACATTTTTTGCTCAAATTCCTGTACAAATACACAGCATTCAAATAGGTATTTACAAATAAGCTTGAAAGAATGAAAATCAATATTTCACAATCTTTTCAGAGAATTCTCATCTCTGGCCTCCCACTTCCCTTCAGACTGGCTGATTCTCCAAGGAAAGGAATTTGGAATATGTCCTTTTCATTGAATTTGGGGAAATGGAGAGGGAAAACACAAACCTGGCTCACCCTGTAGAAGGCAAGACCAAACAAACCCACACCCCCCTCTCTACCCTCTCATGCCACCAGGTGGAGAAGGAAGATGTTCTTACATGAGGACTGCCTTGTCCAGGGATTGAGGTTCAGGAGTGCCCTAAAAGCTAAAGACGAACTATCTAAGAAATCCAAAGCTAGTCCCCAACTGTTACACTTGGGAACACCAGATGGTTCAGGCCTGCCTAGACTGACCCACTCTGCTTGGAGTCACCCTTCAAGTATCAGAAAGGACCTACACTGGTGATAAAACATGCCCAGACACCCTGAAGTGAAAGACACCCTAACCAGGGAAGTCAGATGGGCCAGTGGAAGAGGAACTAACGGAGAACGTACCTGCTCAACGAGAAGGCAGCCTTGTGACTGTCAAGTTGTGAACTCAAGCAAGTAAATGTTTGTAGACTTTTTAAAAGTAACTTAGAAGCACCCTGGTAAAATACTATTGCCACTCCCCCCTATTCCCCAACTAATAAACCGAGAGGAAAATCAGTACCCTGACCTGAAAGTTTCCTATAAAGACACCACTGCCTTCTGCCCAACAGACTGGGGAGGCTGCAGAAACTGCCCTCCTGCTCACCCTGAACCCTGAGTGGTGGTCCCATGGGCCTGGAGCTGGGATCATGCACTTGGCTACTGGGAGGGGATAATTCAACCTGCGTGGCTTTCTGCTTCTAGGAGAAGTCCCTCTCCCCTCCAACTGCGCTTTTAACCCAGGAGCTCGCTGAACCTGATTTCAAGTCCTCAGGCCTTTGGAGCCTGGCTGGGCAGCCACCCCGCTGCTCAGAGGTAGTGCTGAAAATCCCTGATTCAGGAGCTGGAGGACAGGCATGCTGGCCACTTCTGAAAGC EMBV3_31535 GGATCCCTAGGCTCTGCCCTGTGAACCAGTTGCAGGTTTTGGTACTTTGGAAATATAACT Gene GeneID:767848|SLC35B2:NM_001076965:374_cdna Constitutive 0 NULL GeneID:767848 23 GENE SLC35B2 MGC128847 solute carrier family 35, member B2 EMBV3_21618 CAAACATCTGGAAATAATAAGCAGACAGAGTTAAAAAGAAATAATTGATATTTTTCATGT Gene GeneID:507989|APLF:NM_001077874:32_cdna Constitutive 2 NULL GeneID:507989 11 GENE APLF MGC152013 aprataxin and PNKP like factor EMBV3_17935 GAAGGCACAGGTGCAACGAGTCAGGAGCCAAGTGCTGCTGGAGGAGAACAACTATCTGAA Gene GeneID:100301272|LOC100301272:XM_002688499:109_cdna Constitutive 0 NULL GeneID:100301272 7 GENE LOC100301272 NULL similar to chibby homolog 1 EMBV3_12264 AACTCCTATGATTTATCAGTTGATTCATCACCAGAAACTCTACATGAAGGGTGTCACATG Gene BVV0101_002476 + 0 NULL GK000001.2:104023948-104146701 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12246 TGCCAATCCTGCTCGCCAGTCACCTGTCCCAATGAAGTGATGTCCAGATGACATGCAGTA Gene GeneID:616367|EMCN:NM_001076420:20_cdna Constitutive 0 NULL GeneID:616367 6 GENE EMCN NULL endomucin EMBV3_28707 ATTGGTATCTGATTGGCATAGGGGATGAGTCTGGCCTGCACACAGTTCACTTTCACGGCC Gene GeneID:526230|LOC526230:XM_002685007:138_cdna Constitutive 0 NULL GeneID:526230 1 GENE LOC526230 NULL similar to Ceruloplasmin precursor (Ferroxidase) EMBV3_07354 CAATGTAATTTGGGGGAATTCCTGGTGGTCCAGTGGTTAGGACTTCACGCTTTCACTGCC Gene GeneID:508938|SMC5:XM_002689640:7_cdna UTR3_Alt 2 NULL GeneID:508938 8 GENE SMC5 NULL structural maintenance of chromosomes 5 EMBV3_08037 CCAGCTTTGGACAATAACTGCTTTTAGAAACTGTAAAGTAGTTACAAGAGCCCAAGATTC Gene GeneID:100336945|LOC100336945:XM_002683766:2_cdna Constitutive 0 NULL GeneID:100336945 17 GENE LOC100336945 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_32724 CCTAGAAATCAATGATTCAAAACTCATTTCACAAGATTCAGATGAAGAGATATTTGTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27675 CAGGAACTCTTCCACGAGGCAGCCCAGCAGGGAAACACAGGCGTGCTTATGGGCATGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04436 CTGCAGTACACCGTCAAGCACTACCTGCTCTACTTGAGCCGGGTGCAGGAGCGTGCAACA Gene GeneID:516108|LOC516108:XM_002697903:510_cdna Constitutive 2 NULL GeneID:516108 25 GENE LOC516108 NULL similar to CG2446 CG2446-PC EMBV3_34900 CTACTTCTTCTCCTTCACGGCGGGCAAGGCGCCGCACAAGAGCCTGTCCGTGATGCTGGT Gene GeneID:617462|LOC617462:XM_002693576:271_cdna Constitutive 0 NULL GeneID:617462 15 GENE LOC617462 NULL similar to C1q and tumor necrosis factor related protein 4 (predicted) EMBV3_14667 CCATGCTGAGCTCTAAGGGCTGAATGGACAGAAGTTCTTAGGACTGGGGTGTGAACTCTC Gene BVT0102_124444 + 1 EMBV3_19231 GK000005.2:102278445-102365053 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07617 CGAGAACCACATGGACTTCTGCAAGGGAGATTGAAGTCGCCTGAGTTTGAGCGAAAGGAT Gene GeneID:510483|PIGC:NM_001034383:96_cdna Constitutive 0 NULL GeneID:510483 16 GENE PIGC MGC128298 phosphatidylinositol glycan anchor biosynthesis, class C EMBV3_01567 GGGCCGGGATAACAAATACTGTGAAACGATGATGGAGAAACGACACCTGACCAAACCCTG Gene GeneID:783225|LOC783225:XM_002690654:201_cdna Constitutive 0 NULL GeneID:783225 10 GENE LOC783225 NULL similar to Angiogenin, ribonuclease, RNase A family, 5 EMBV3_01647 CCTCACATACAGGTTGGGTAACATCAGTAAAGTGGTCGCCTACCCATGAACAGCAGCTCA Gene GeneID:528209|WDR12:NM_001075907:125_cdna Constitutive 0 NULL GeneID:528209 2 GENE WDR12 NULL WD repeat domain 12 EMBV3_40252 CGGGTGGACCGTATCATCCTGCTCTTTGACGCCCACCTACGACGAGATCTTCTACACGCT Variant GeneID:511908|EHD1:NM_001015578:604_cdna 71^834 1 EMBV3_24252 GeneID:511908 29 GENE EHD1 NULL EH-domain containing 1 EMBV3_38904 TACTTGTTGCCAGAAAGGAGGTGGGCAAGTCGTAAGAAGACCTCAGTGAAGCGGAAGACC Gene GeneID:530157|ESYT3:XM_002685050:132_cdna Constitutive 0 NULL GeneID:530157 1 GENE ESYT3 NULL extended synaptotagmin-like protein 3 EMBV3_25386 TGCTTTCTCAGGAACACTGGGGGTGGCAAACTCCAACCGGAAATAAATACCCCAGCCTCT Gene BVT0102_132139 - 1 EMBV3_28185 GK000023.2:50095626-50234184 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42439 AGAAAGGTGTTTCTCTCCTGCGAAGCCCAAAGCAGCGACAGGACCATCCTCTTTGCTGAA Gene GeneID:615277|LOC615277:XM_002696864:256_cdna Constitutive 0 NULL GeneID:615277 22 GENE LOC615277 NULL similar to thioesterase superfamily member 5 EMBV3_14608 AACTGAGAGCTTACTTGCTCCTGTCTCAGGTCCTTTGTCCTGTCTGTAAAATTCCTCCCC Gene BVT0102_013785 + 0 NULL GK000008.2:40253113-40335867 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19805 TAGACTTGTGAATCTCACATACAGGCTATATAGATGGGCCGTGAGGCAATGAGGATTCAG Gene BVV0102_030705 + 0 NULL GK000006.2:63994209-64486958 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00166 GTGGCACCAGAAAAGGCTGCTTAAGACATCCACGAAGCAAGAAAACAGGCAGCAAAGTGC Gene GeneID:786888|PNPLA1:NM_001099200:74_cdna UTR3_Alt 2 NULL GeneID:786888 23 GENE PNPLA1 MGC151727 patatin-like phospholipase domain containing 1 EMBV3_31616 CCTGCTTCTATGCTTGTGCTCAGTGCAAGGAAAAGGACTTGGACAGTATTCCCTAAGACT Gene BVV0102_118935 + 1 EMBV3_27796 GK000014.2:34830957-35495615 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21910 GTTTGTTTAATCCTTTGAGGTAATCAAACATCCATTTCTATTTTCTGACCTCTAAGTCTA Gene GeneID:532863|PI15:XM_002692705:115_cdna Constitutive 0 NULL GeneID:532863 14 GENE PI15 NULL peptidase inhibitor 15 EMBV3_34028 CCATGTACGATGACCCCACTCTGCCGGAAGGTTGGACCCGAAAGCTTAAGCAAAGGAAAT Gene GeneID:539629|MECP2:XM_002699713:95_cdna UTR3_Alt 2 NULL GeneID:539629 X GENE MECP2 NULL methyl CpG binding protein 2 (Rett syndrome) EMBV3_24781 TGGGCGACCAGTTGTGGTGAAGCTAAATTCGGGAGTGGATTATCGAGGGGTCCTGGCTTG Gene GeneID:784698|LOC784698:XM_002685282:70_cdna Constitutive 0 NULL GeneID:784698 2 GENE LOC784698 NULL similar to Sm protein F EMBV3_23974 CAACCAGTTTGACCTAGGAACTCGTCAGGCAGTACCTCTGTCCTACTCACTATGAAGTAG Gene BVV0101_091449 + 0 NULL GK000014.2:23613022-23618560 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15579 GGTGTGCCAAAAGTTTTAAAACTGATAATGCCCCTTTGAAGCTGTGGAGAGATTGTTTAC Gene BVT0102_262716 + 0 NULL GK000006.2:25700219-25889905 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05130 AAAAGGGCTCTAAAAAAGCTGTGACCAAGGCCCAGAAGAAAGACGGCAAGAAGCGCAAGC Gene GeneID:530677|LOC530677:XM_002689872:14_cdna Constitutive 0 NULL GeneID:530677 8 GENE LOC530677 NULL similar to histone cluster 1, H2bn EMBV3_28238 CCAGGGCACCATCCTGCTGTTGCATTGCTAACCTGTCCACATAACACACTACCTCCAAAA Gene GeneID:618567|LOC618567:NM_001102525:70_cdna Constitutive 0 NULL GeneID:618567 5 GENE LOC618567 MGC179479 hypothetical protein LOC618567 EMBV3_22900 CTGAGAAAGCTGCTAGAAAACTGTCCAGTGCAACTTTAGCTTCCAGTCCAAACCGGGCCT Gene GeneID:533766|HHIPL2:XM_002693965:170_cdna Constitutive 0 NULL GeneID:533766 16 GENE HHIPL2 NULL HHIP-like 2 EMBV3_13557 GCTGTGGTCCTCATCGAAGACGCCATCCAGGATTCTGAGCTTCACCATTTTCTTGATCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01906 TTGACCTGGTTCAACATGGGGTTGATCGCTGCCTATTCTGCTTCTCGGGTGAAGCTGTCA Gene GeneID:528487|PTPN23:XM_002697108:13_cdna Constitutive 0 NULL GeneID:528487 22 GENE PTPN23 NULL protein tyrosine phosphatase, non-receptor type 23 EMBV3_29875 GATATGGCTGGAGATCCCTTCTTCTACGAGACCTTTTATCTATCCATAGTTGATTTATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10081 GAGGTCCGTCGGGGGCGACACCCTTTCTCAGTGTGACTTCCTGAGTTTGTAAATGTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35708 GCAGTTTGTAGGATAGATTTTTGAGTATGTATCTTATCAGAAATGCATGCCAGAGAGGTA Gene BVV0102_160376 + 0 NULL GK000008.2:62082502-62198518 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00064 AGCCCATACCTACAAGGCTGATAGAGAGAAGTACAACAGACTAGCAAGAGAATGGACACA Variant GeneID:511801|UBE2D4:NM_001075539:35_cdna 490^533 1 EMBV3_41738 GeneID:511801 22 GENE UBE2D4 NULL ubiquitin-conjugating enzyme E2D 4 (putative) EMBV3_25317 AGGAAGGATCACTCCGTGAACAAGATGTGTGCCTCGTCCTGTGATTTTGTGAAGCGGCAC Gene GeneID:618749|LY6H:NM_001079636:134_cdna Constitutive 0 NULL GeneID:618749 14 GENE LY6H NULL lymphocyte antigen 6 complex, locus H EMBV3_43010 ATGGCCAGTGCCAGCGCCCACAATAAGTGGAAGGCCATGGAAGGCATCTTCATCAAGCCC Gene GeneID:517962|SDF2L1:NM_001035323:67_cdna Constitutive 0 NULL GeneID:517962 17 GENE SDF2L1 MGC127903 stromal cell-derived factor 2-like 1 EMBV3_22063 ATGTACACAGAACCTTCTGCGTGTGGACAGCACCAGGACCTCAACTTCAGGAGATGATCT Gene BVT0102_085385 - 1 EMBV3_26457 GK000018.2:2838861-2845658 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085232 TCONS_00085231 TCONS_00085233 1 XLOC_051820 Coding TCONS_00085232 XLOC_051820 Coding Coding TMEM170A 18:2844724-2858888 j TSS63699 3637 1 TCONS_00085232_2 144 3 0.74341594294994 6.41419393159806e-05 1.2524133316142e-11 9.17556851226561e-05 2.25502682173703e-05 5.71722932427925e-05 0 5.23650125384562e-06 2.04596563505394e-05 6.2412272490072e-08 0.00034484033190403 0.000125863979478446 8.5562418009495e-05 6.39006275888352e-05 0.000161667074452455 4.30219428530978e-06 0.00677535243500955 0.000482633243822726 0.00772467019837351 4.86976691982925e-12 0.000143888927353275 2.12674234215978e-11 0.0025577234099287 0.00255302195710474 0.00463079361979384 5.62410247667408e-05 1.91463768392302e-05 2.33298367745411e-08 0.000401289271201966 0.000413854703742267 0.00145556391368333 XM_005218378.1 TMEM170A PREDICTED: Bos taurus transmembrane protein 170A (TMEM170A), 0.0 6421 100.00 0.978553753093209 XM_005255795.1 TMEM170A PREDICTED: Homo sapiens transmembrane protein 170A (TMEM170A), 0.0 1036 75.14 0.406378883695353 TCONS_00085232_2 sp|Q9D342|T170A_MOUSE T170A_MOUSE Transmembrane protein 170A; 9e-90 262 96.53 0.993055555555556 1 coding 1 1 1 1 -0.0878447465821641 0.505622766003361 0.0322154119939385 0.533856357737789 TTGGCAGGGCCGTTGGGGTAGGAGGAAGAGGGCCCCGGCCGAAGGTGACGCTGTGGCTGCGGAGGTGTGGGGAGCGGAGCAGGCCGTACGCGAGCTCGCGCTGCGGCAGCATCTCGGGCGCTCTTCCCTCAGCGGCCCCTCGGGCGCTCTCCCTCAGCCCTCTGCGGTGAATGGCGGCGGGATGGAACGCGAGGGGAGCGGCGGCAGCGGGGCGTCGGCCGGGCTCCTGCAGCAGATCCTCAGCCTGAAGCTGGTGCCGCGGGTGGGCAACGGGACGCTGTGCCCCAACTCCACATCGCTCTGCTCCTTCCCAGAGATGTGGTATGGTGTGTTCCTGTGGGCACTGGTGTCTTCTCTCTTCTTTCACGTCCCTGCCGGATTACTGGCCCTCTTCACCCTCAGACATCACAAATATGGTAGGTTCATGTCTGTAAGCATCCTGTTGATGGGCATCGTGGGACCAATTACTGCTGGAATCTTGACAAGTGCAGCAATTGCTGGAGTGTATCGAGCAGCAGGAAAGGAAATGATTCCGTTTGAAGCCCTTACCTTGGGCACTGGACAGACGTTTTGTGTCGTAGTGGTCTCCTTTTTACGGATTTTAGCTACTCTATAGCACATGCCCTTGTGCTATGATGGTGAATCGGTTTTATAGAATCCTCAAAAATAATACATTATGGGATGTAGCGTTTTCTTAGTTCTTCAAACGGTATGAAGAACAACACTTCGGTCCTTTCTTCAGTTTGAAGTTCCAGGAATTAAAGATCTTTTTGGACTCATTGTTCTCAACCAAAAAAAAAAAATCAAGTTTCTTTTCTTTCTGTTTTTACATATTCAAATCAGGCAGTTTTACAGGTGCATCTTTACCCAAGCCCAGTCAGCAGTGCTTCTGGGTTGGCATCCTTCACACTGAAATTTACAATGTCCTGTGAGAAAAACGCAGCCTTGCGTGTTTCAGAGAAACTGTAGAACATATTGGTTTACTTCTGAGCACAGTAAACTGTACTGAAATCTTATTTGATCAAATCTTGATTAAAATTTGGCAAACCCTTGCCACATCTTCATGACAGTAAGTGCCAAGTAGGTTTTGGTCGAGCATAACGTTGAGAACAAATTTGGAGAAATAAAACACACACAAAACCTATAACTCAAGTAGTGGCTTCAGTTCCACTATTTAAATAAATAAAAGCTAACTCCTGAATGCTGTGACATTTTATGAATAATATTTTGACCTCTGATTATTTTATATATTTTAAGATATGTGAATTTCCTGTTTTGTACATTTTCTCAAAATAAGCTAGGTAATTGAGAATTTTTCCACAGAACTCCTGTATCACCTTTTCCTATCACTTTATAGTCTATTGATTTTATTTAGTTTAATTGGAAACACGCCCTATTAAATAGTTTGAATGGAAAATTCTCAGCCATATTGATCAGGATACTCACTGGACATTGAGACATACACACAGAAAGATACTTTAAACATTCTGTTACCTTTTTTTTAGTGACTTTGGTTTGCTCATGGCTCTTAAAAAATTGTAAAAGTGCAGCTTTAACTGGAATTAGGGGTTATTGATTTCCTAGTCTTAATGTGGTTACCTAGTGGTGGGTCTTAAGCCCATTTTACAGTGGTGGGTATGACTCCCAGAAAGTGCCTAAAGTGTAATTTTCAAATATACCTTCCACTGTGCCCTTTATATTTCCTTTCAAGAGAATCTATATCCTTAAACAAAATTAAATATCAGAGTTTTTTTTTTAAACCCAATTTTAGCTCTTTTAATTTTTCTTCGAATGCCTAGCTTTCTTTTTCATCTAAAGGCCTAAAAACTGTGACCTTCAAAAGAAAAAGGATTGCAAAAATTAAATATCTGACTTTATCCTTAACTGCATAAACTGGTTTGTATGAAATACAGTTGTTGTTATCTGTTTTCAAAATAGTTTCTGGTCATTAAATATGACATTTTAAAAGGAAAGTTTTCATTATGAGTGTGAAGCTACCTGCCCATAAGGTCATGTGCAGTGCTGTTTGATTTAAGCAATATGCACTCTGGCTTCTGATTAAAAATAGCCAGGAGATGGTCACAGAGAAAAATTAAAAAGGATCCGAAAAAGTAAGTGGACATTTTCTTTTAACTAATAGGCCATTAGACTACTTATCAAAATTACAGTAATAGATATACTCTAACGAGGTGAAAAATTGTAGGAGTTGTACACAGGCAAATATCCTTACAAATTCCCCAACAAGATTACTCTCCAATGCTCAAATCTTTCTTTCAAACAAATTTTTATGTCTTTAGCTCAAGACTCCATTTTTCAATTCAATAGTTGGATTTTGAAACGTAGCCCTTCAGCTTAAGAAGTTTTCCTTCATCTCTATTGAAAGATGTCCCAGCATTCTCACTGAAAACATTCCTTTGGATAGAGTTTCACAAATTGAGTATGGGCTAGTGGTCAGTGGGCTTCTCTCCCCAAAAACTAATTTTTCAACATATTGATCCATGGCTTAAATGTTTGGTTGCTTCACTTCTAGAGCCAAAACACAAGAACTAATGCATTTTGAAAGCTGTCTTTGTTTTCATCTGTTTCTTGTTTGATTATCCACTGTTTTTAAGAACTTCAAATGTAAAATGGATCTTCAGATTATTGAATGTTTCATCCATCCCAGTATGTGAACATTCTGTGAATAAATGAATATAGACTTTATATAACTTGAGCTTTGTGGCTTGAAATGTTTTCAGGAAGAAACTATTTGAATTATAAGGAATGTTTATTGTCCTTAAGGGTTTCTTTTTCTTTTTAATTTCTCACCTCAAATGCACAATTATTTGGGGGTGGTTGCTCAGATGAAAAAGTACTGGCATTTGTGTTGAACATTTTATTTTTTCACATAAAGCTTCTGAGACGTTTTGCCAACTCCTGACTTGCCTGGAGACACGTGAAACCACCCCTGCCCCAGCTATGCATCCACTTTTCTTTTAGTGGGAAGGAGAAACCCCCAACCATGAAAAGCTGATTTCTGGATTCTTTGAGATAAAGGTTTTAGGAGAAAAACATTTCATGTAAACTTAAATCCAATACAAATGAGTAATGAATATTCCAAGACAAAGGTGTCTCATTGTACTATTTACTAATCCAGAACATTACCTAGGAAATGTCTCAACTAGGGAGATAAAGTTCATGCAAGTAGCTATCTTTAAGCTCTTAGGTTTCCTAAGTCTTTAAATTGTATGTTAGCTTTTGATTCCAAAAGCTACTCTGGTTTGAATGAAGTTCTTAATACAACTGCAGTGCACACCAACCTTCCCTAGGAGATCATCTCCTGAAGTTGAGGTCCTGGTGCTGTCCACACGCAGAAGGTTCTGTGTACATGTGTTTCTGTTCTGTGCATTGTTACCCTGCTTGTGGTAAAGTCAGCTTAACTTTTTGTATTAGATTATTTCACTAAATGCTGCAGTCAAACTGATCAAATCTTTGTACCACAGAAAGTTATTTAAATTTTATTTTTCTACTGAAATTTCTAATTCTGGTATAAATGTTTATCAATAAAGATTACTTTCAACTCTGTGCACTTGAACTGATTTTTCTTTTTCAGTGGCCAATGAATTTAAGCTTTTGTAATGAAGATTTCCACCTTAAG EMBV3_00198 GCATGGACACTGCATGCTAATGAGACAACATTTGGTCCAATCCCAGGCCCTTCTTTCTGA Gene BVT0102_011486 + 0 NULL GK000011.2:26284660-26340977 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23126 GGGTACAGCTAAGGCATTCAGTAGTGTTAATAGTGGTTAATAGTGGTTCTTCTGGCTCGG Gene BVT0102_045648 + 0 NULL GK000019.2:22621495-22629081 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095735 TCONS_00095734 TCONS_00095736 TCONS_00095733 TCONS_00095737 1 XLOC_057782 Coding TCONS_00095737 XLOC_057782 Coding Coding RNMTL1 19:22622176-22633398 j TSS71297 7979 1 TCONS_00095737_2 413 0.166060909888457 5 0.289368149006327 0.000364219796604849 0.00104413469584811 0.00092166210338422 0.00010307260303792 0.000848500746809174 0.000522476301805135 0.000117465075407586 0.000648677378190538 4.52084528156336e-06 0.000382332120126108 2.72495473582331e-15 3.05813508974006e-07 0.000131607236678286 0.000218263718645805 1.31930026214225e-11 2.92664782347956e-09 8.6922889451125e-15 2.77281687964862e-10 0.000416515370214137 4.48291506115542e-08 3.79743492061371e-08 5.18804010961227e-08 0.000461740963061291 0.000543236964705201 0.000639993376690281 0.000214485234934564 0.000458318603606082 4.92413052849575e-05 6.07901461060814e-11 0.000500245002949934 XM_582975.3 RNMTL1 PREDICTED: Bos taurus RNA methyltransferase like 1 (RNMTL1), mRNA. 0.0 5777 100.00 0.401303421481389 NM_018146.2 RNMTL1 Homo sapiens RNA methyltransferase like 1 (RNMTL1), mRNA. 0.0 1384 84.81 0.154655971926307 TCONS_00095737_2 sp|Q9HC36|RMTL1_HUMAN RMTL1_HUMAN RNA methyltransferase-like protein 1; 0.0 709 84.91 0.990314769975787 2 coding 1 0 1 1 0.0382502976848879 0.906489609415982 0.0448501716292628 0.61690466495785 GAAGATGGCGGCGCTAGTGAAGCGCGTGGGATTGGGTACGCGACCTTTGCTGCCGGTGGTGCAGGCTTGGGACCTCGATGCGCGGCGCTGGGTCCGGGCACTGCGGCGGAGCCCCGTGAAAGTGCTGTTTCCATCTGGTGAGGTTGTGGAACGGAAGCTCGATCCCGGGAAACAGCCTCGGAAGGCAGCGGCAGAGGCCAGTCCCCGGGAGCAGCGACAGAAGCAGCAGATTCAGGGGCCAGCATCCCAGACGCCCAGCACCTGGGAAGAGTCGGGGCTTCGCTATGATAAGGCTTTCCCTGGAGACAAAAGGCTAAGCAGTGTGATGACCATAGTTAAGTCCAGGCCATTTCGAGAAAAGCAGGGGAAGATCCTGCTGGAAGGTCGTAGGCTGATTGCAGACGCTCTCAAGGCTGGTGCTGTGCCCCAAATTTTCTTCTTCAGCCGTCTGGAATACATAAAAGAGCTGCCCATTGAAAAGCTGAAAGGTGTTAGCCTCATTAAGGTGAAATTTGAGGATATCAAGGATTGGTCCGACCTGGTAACACCACAGGGAATAATGGGGATTTTTGCCAAACCTGACCATGTTAAGATGACATACCCTGAGACTCAGCTTCGCCACACACTGCCCATATCGTTGATTTGTGACAATCTCCGTGACCCTGGGAACCTGGGGACAATTCTGCGATCTGCTGCTGGGGCAGGCTGCAGCAAAGTGTTACTCACCAAAGGCTGCGTGGATGCCTGGGAGCCCAAAGTGCTGCGGGCAGGTATGGGCGCACACTTCCAGGTGCCCATCATCAACAACCTGGACTGGGAAGCAGTGCCCGACCACCTGCCCACTGACACCCGCGTCTACGTGGCTGACAACTGCGGCCTTTACGTGCAGGCCCAGGCCCAGAGGTCTAACAAGGCCAGTGACTACGGCTGGGTACGTGACCAACGCCCACTGAAGTTTCATGAGTATGAGGAAGAGGATCTAGAGAGTGGAGCGAGTCAATGCTGGCTCCCTGAACTTGAGGTCCAGAGTTACGACTCAGACTGGACAGAGGCACCGGCAGCCGTGGTGATAGGTGGGGAGACCCACGGCGTGAGCCTGGAGTCCCTGCAGTTGGCCGAGAGCACAGGGGGCGGGAGGCTGCTGATCCCCGTCGTGCCTGGCGTGGACAGCCTGAATTCAGCCATGGCCGCGAGCATCCTGCTCTTTGAAGGCAAAAGACAGCTGCGAGTGAGGGACGGGTGTTAACACTGAGAGGAGGGTGTCTGGAAGCCGTCCTCAGCTTGAAGTTGTCTCTGGTTACTGGAAAAATAAGAACTTCCATGACTTTCTGCTCAGCCTCAAAAATAAGGAAGGTCAAAATTCCTCCTGAGGTCTCCTATCCTCCCACTGATTTTTATATGTGTGTGGGTGGGTAAGAGACAACAGTAAGTGCTCCCATGGAGTAAGTGCTCCTCGTGGCTCTTATGTTTTTAAAAATTGTCCACCAAAGAGCATCTTTGTGCCCAGAAAGTTGCTGAAGGCATCATCTTGGGCAGGAGGACCCCTCCCTCCACAGCTGCAGGTGTTTGCAGTCAGGGAGGGCTGGTTAGAATGACCAGGCTTGGTCACTTACTCCTCTGATCATTGGTCAATGGAAAGTAAGCCCCTGTGAAGTGCAGACCAGTAGATTATGTTAAAATGCTTTATTTATTTCAGTGTGGTCAGTGGGTGTCAATGCCCATCTTTTCATCTTGGCCTAGTGGTGAGGACATTGCTGAGAGATTAATGACCCAGGAAGCTAAGGGTACAGCTAAGGCATTCAGTAGTGTTAATAGTGGTTAATAGTGGTTCTTCTGGCTCGGCTGTGTTAATCTCTTTGATTGTTCATTCAGGCCATGACTTAGACACTGTTTATGTATGACACAGTTTTTTCCCCCCATTTCTGGTGAAACAGCTCATTTCATCAGTTGGTATTATACCTTCTTTGCATCTCTGCAGATATTTGAAGACTCTCAGTTCAGAAAAGGAAAAAGCAGTTTTTAAATCTTCAGCTTAATCCTGCATCTCTCAACAAAGCCATACTCTTTGTAATAGCTTCCTGCTGTTAGTCCTGCTTTGTGTAACCCTTTTGGTTAAATGGAATGACTTGTTTACATTAACCCCTCGTCCAGCATAAACAGAACACCAGTGTTCTTGGTGCTGTGTGAACAGAGGCTCCTGCACAGAGAGGGGCGGAAGTTCTGAGGATGAACACTCAGGGCCCTTGAGCCCACAGCTCAGCAGCAAAACCCTGCTGTTCTCTTAAACCAGGGCAGGCTGAATCCTTACTGAGCACCAGTGGGATGTAGCCAGGGACATGAGGGCAGGGGCAGGTGGTGATCACTGTAAGTCACTATGGGAAGTGGGGGGTGGGACTAGAGTATGGGACTGACTTTTAAGCAGTGTTTTTGCAGCCACAGAGAATATGGTTGGAAAAAAAATAATAATAATAAAAAAAAAAAAAGAGAGAGAATATGGTTGGAGACTGAGATGCCAGCAGTGTAGTGTGAGCACCTCCCTTCCATATGGTGGCTCCTGCCTTGATTGGGCTTCCTTGGGAGCCCCTCAGCTGCTCGTCCCAGGGAGGTCCAAAGAGTTGCAGCATGCCCCAAAGGAACTAGGGACCTCTCCTAACCCCTTCACCTTGCCCAGGTCCCTGGTAAACCAAAAGGTCACGCATGGCTGTGCCCAAGTGGCCCCGGTGGGACTGCTTTGTCATATGGGAGAGGAGTGGGTTTTGCAGGAACAATCTCTCTGGTTGGCTGTGCTCTCTCAGCCTGATAGGCTGGAAGCTGCTTTGGTCTGGACCTGCCCAGGGCCCCACATAAATGTTGGGTGACAGTGGCCCCTGGAATGTTCTTGAGAGCGTCTATCCCCGTCAGCCTTTAGAAACTAGAAGAGCCCGCAGCCTTTGTTCTGTGCTGAGCCCACAAAGGCTGCGTGTGGCCTCCTCTGCCAGCCTCACAGCCACAATGCCTGCAGGTGAAATGGGCGGACAACCCACAGACCAATACCACTCTACTGACAGTCTCCCAACACCTCGGAAAAGTGCTAAAGAAACATACATCACTGAAAAGAGGCTCCATGCCTTTTCAGCATGAAACCAGCCTCCTCTTATTTTTATTCCTGGGTTTTTGTCCCTGCTGATTTTTGTCGCAAAATAAAAACCAATGAAAGAACAACATACCTATATCTTGTCTTTGTTCAGAAAAACAGTACTGCAAAAGAGCCTACGCTGGTTTTATCATCCTGGTTGTAAGAAGGAAAATAAATTTGCGTCCCCTTCTCTTCATGATCAATGACTTGTATACCATGCCTTGAAACAGGGATGAAACTGAGCAGCACATGACAAGTAAAGAACATTGCTCGGCTGAAAGAAGCCTTCAGAACTTCAGAAGGTTGGCCAAGCTGCCCCTTGCCTTTGTGCCGCACGTAGCTGTAGTGGTGGTATCTGCCACAAGAGGGCAGTCACACCTCAAAACGACTCCCAACGCTGAAGGGAGGAGTGGGGATTTCTCCTGGATACAAGTTGTTCCAATCAAGATCAGATCAGATCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCACAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTGAGACTCATGTCCATGGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCTTGCCCCCAATCCCTCCCAGCATCAGTCTTTTCCAGTGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTCCCAACACCACAGTTCAAAAGCAATCAAGAGGATGGAGTCAAGTCTCCCTCTACCACCCTGGGCCTGTGGCAAGCTCAGAGTTGCTGCAGTGGGAGATCCATCCACATTGTCATTCGTTCTCGGCAAAAATCTTAAAAGTACAGAAAGTTGGACCAAAAACTAAGAAGGAAATGGACAGAAATGGGAAGCAGCTGCTACAGGAAAAAAACTAGCACATCTTTTTCTTTTGAATGGAGACTCTGGAAAAGCAGCCCTCAGCAAACGCTGATGTCCCCAGGTTCTTTGAACATCCATTGGGAACCCGCCACCTCGCCCTCTAGGAGTTTCAAGATGGGAGGCATAAAAGCCCTTACCCCTCCCCAGCTTCGGTTGCTATCGCACCTTAGAATTTCAGTCATTCACAGACAAACGTATGGACACCAAAGCGGGAAGGGTGGATGGGATGAATTGGTAGAGGACATACATATATAAGAACCTACTGTATAGCACAGGGAACTCTGTTCAGTGCTCTGTGGTGAACTAAATGAGAAGGAAACCCAAGGAATAGAGGACATGCATACATGTGGCTGATGCATTTTGCTGTACCAGAAACACGGCTGCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGACCCCATAGACGGCAGCCCACTAGGCTCCTCTGTCCCTGGGATTCTCCAGGCAAGAATACTGGCGTGGGTTGCCATTTCCTTCTTCAATGCATGAAAGTGAAAAGGGAAAGTGAAGTCGCTCGGTCGTGTCTGACTCTTAGTGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCTTAGAAACATGGCAGTGTTAAGCAATCACACGCCAATTAAGGGGAAAAAAGTCATTAAGGCCCAGAGGATAAGCCAACCTTGAGGAACTGGTTTCTACGTTTCACCTGGAACCTCCTAGCACGTTCCCCAGGGTTATTAACAACACCAGATGTCACCACAAGCTGAGCTGCCTTTAGCTCCACTTTTGTTGTTACATCACGTGAAGACCCCAGAAACAGCACCACACCCGGGCTGGTACTGAAAACCATCTGCTGCGCTGTGGACCCCTCTTGGCCAAGCAGCCTCCACCCTCTGTGGGAGCTGACCTGGCTGGCTCACCTGGAAAATGTGTTTTAAAGAAAACACTCATGTAAACACCTTTTAACTCCAAGATCTTACTTAGTTTACACCAATGAATATGCAAAGGAAATATGCTAGAAGCCAGATGAACAGACAAGCTGATGCGCTGCTGTGGGTGACTTGACAGTCCCTAAACCAGGGTCCCGAGTTACCTTGGAGGAGCTGCAAGCTGCTTTTTCAGCTGCACTGAAAGCCTCAGGAAGCCAGGCCGCTGCCCAAAGCACGTGTACCAAAAATCTGCACGTAGCAATGGCATCAGTTCTGTCCTGGCCACATCTGTAGGGAAGAGCAACTTTTTTCAACTGAGGCCTCGAGGTTGCAGAGGTGCTGGTGCTAGTCGCTGAGTTGTGTCCGACTCTTTTCGACCCCATGGACTGTAGCTCACCAGGCTCCTCTGTCCCTGGGACTCTCCAGGCAAGAATACCGGAGTGGGTTGTCACATCCTCCTCCAGGGGATCTTCCCGACCCAGGGATCAAACCCAGGTCTCCTGCATTTCAGGCGGATTCTTCACAGTTTGAGCTACAGGGAAGTTGGAGAGGCCCATCCCCACAGCTGCTGCTTCCTCAGAATGCAAGGAGAGAATACAGGATGAGGAGATGAGGGTCTGGCCTCCCAGCCTTGCTTGCACCTCTGTGACTGCAGGCCCAGAGAGTGGTTTGGCTAGCTGGGGACTTCATATCCTCTGATGTCAAAGGCGATCTGGTTTGGGGGCCTGGGCTCTAACCATGCCTTCTCCTGTATCCCACTTCTAGCCCCGTGTGGTTGGCTTACTTGTGTGAGGCAAGTGCACCCAGGAATCAGACGTGAGGCTGGCTGCACACTGGCCTACAGGCTGGGGGACAGAGGCTTTTGGGAGGAGGCGTGTGATTGCATGGAAACCCAACAGCTCCTCAGAACCATCCTACCTAAATCTAGCCACACATTTCCTGCCTTGGGAAAGTATTCCAGAAGGCCCAGGGGGTGGGACACAGGCTGAACAATGAAATATAAATGACTTCTCTTCATGCTTTCACACTAAAGGTGTATCTAGAACATCCTGATGTCAGACTTCCTCCAGAAGGAGAAATCCCAGCCATAGAGTATACTCCATATCATACTTTGCTACATCTGAGCCTACTGTTTCCTGGAAAATATTCCTTCCTTCACACAGGCACTACTTGCTAATAACGAATAACCAATAATGAAGCTAACAAACAATAGCCATTTGTCTGCAGAGAACTTCCCCTTGAGCAGCCTGCTTGGAGGAAAGGAGTGGGTGCTCGCTCAACAAGGGTTGGTGTTGAGCAAAGAGCGACTTAGGTTTAGGGCTCACTGAACGCAGCTGCTTCAGGGTGAATGGAAGATCCTGAGCTCTAGCCCATCCTCGGTCCACACAGCAGCATCTGGAGAGAAGCTGCAGGGGCACTGCCACAACCCACATCCCTCACTTCTGTCCTGCTGAGGTCCTGGTCCTGGCAGGCAAGCAGAGGCCTGCCCAGGGAGGGGTGGGGGTCCACAGTGAAACAACGCCGGCACCCTGGAGGGGCTGGACCAGGAACTCACTCGGGCCCCTCCCAGACCTGCCATTCCAAGGCCTCTCCACGTGGACACGCCTATGTGTGTGTGTAGCTTCTCCCTCGGGTGACCTTACTGGGTCCAGCAGACTCTACTATGTCTCTATCACTGCAGAGTTCCCTTTGCTGCCCTGCAACAAGGCAGCAGGAGGAGAGAACAGCTTTTTAGTGTCTTTAATTAGGCAACAGGAAAAAACACAGTCTGGCTGAAAATTACCACTTGAAGCTTGGCTAATGCCAAAAACAGCAGAACAGACTCCCTGTGCTCAGATACGTGGGAGGCACTGATTCCAAGGACACACTTGAGGCTAGGGGAGCAACCAGCACCCCCACCCTGCTCCTGAAAGAGAAGGTGGTTCTCAGTCACCCTCCAGCTTTTACAGCGACCTGCTATACATACCTGGACTCCCCTAATGGCTCAGATGGTAAAGGATCCACCTGCAATGGAAGAGACTCGGGTTCGATTCCCTGAGTGGGGAAGATTCTCCTGGAGAAGAGAATGGCTACCCACTCCAGTATTCTTGCCTGGAGGATTCCATGGACAGAGGAGCCTGGTGGGCCATGGTCCATTGGGTAACAAAGAATTAGATATGACTGAAGTGACTGGGCATGCATGCCAGTATTCTCGCCTGGAGAATTCCATGGACAGAGGAGTCTGGTGGACTACAGTCCATGGGGTCACAGAGTCCACCACGACTGAGTGACTAACACATAAATACCTATCCCCCAAACATACCTTTCTTTTTTTCTTAAGGAGATCTTTACTGTTGAAGATGGGTTTTTAAAAAAAAGATCTCAACTCCATTAAAAAAAAAAAAAAAAGGGTAGAATCAGATCTGGAAGTCATTGTGGTGACCAGAGACTTGTAACCCCAGGGTGGCATATTTACAGCCACCATCCTGTCCCAAGCTGCAGGGCCCGGTTTCCTTTGCTGCTGGCGGAAGCCCTTGAATATGTCACAGCTGGTGTTTTAACCTGCTTCTAATTAGCGACCAGAATTTTAAGGTATTTTGGAGCTGCTTAGTAGGAATTAAGAAGCCACCCACTTCGTCTGCATCAATAACCTTTAAGATCTCTAGCATCTTGCACTATAGAGATTCTTCACTGGCGAAGTGACTCTCCCCTGGCATTTCCCCCCAAAGTTGCCACTGTATAAACCAGGCGTACCTTTTTAGTAAAATTTCCCACTGATCTTAACCTCCACACCCCCTTCAAGAGGGGAATTCTGGTGTCGTGGGTCCAGTTGACATTAGTGGCAAGTAGTTCAGCTGGCCCTATATGGGCATAGAAGGATCATAGATGAC EMBV3_17157 GTACACAAAGCACCAATGCTGTTAATGGCCTTAGCAGAGGCTCATGCTGAAATTTGCCAG Gene GeneID:530042|NLGN1:XM_002684915:5_cdna Constitutive 0 NULL GeneID:530042 1 GENE NLGN1 NULL neuroligin 1 EMBV3_07507 CATGCTGAACCTTGGCTTCCTGGGGCCTTGTTTTTGGAAGAACCTGAAGCTAGAATCGAG Gene GeneID:522029|RPL7L1:XM_002697242:430_cdna Constitutive 5 NULL GeneID:522029 23 GENE RPL7L1 NULL ribosomal protein L7-like 1 EMBV3_09374 CCCGGGTTGCTCAGGGCAAATGGAAAAACAGAGGACAAGGTTTAACAAGCTATGCAATCT Gene BVT0102_146608 + 0 NULL GK000021.2:31006060-31012601 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123591 1 XLOC_075143 NonCoding TCONS_00123591 XLOC_075143 NonCoding NonCoding - 21:31010257-31011453 - TSS92350 1196 1 TCONS_00123591_7 143 1 0 0.00019339209379323 0.000940989909156904 0.000425560476834398 6.24894896622065e-05 5.36650461525571e-05 0.000161506159046928 0.0001901647733874 0.000405523827047696 0.000131942021452313 0 1.91403455384754e-06 0 0 6.29296706012853e-05 7.38391352275854e-05 0.00174457827427562 2.77630101112966e-05 8.39161409855361e-05 0.000155889722139207 0.000216464577989788 5.07646969568784e-05 0.000539797020006669 0.000721038118160956 0.000686846530757582 0.000249101326543565 3.53452226480464e-05 0.000387017191332495 2.4093302579907e-05 0.00013394792960031 7.54043757572152e-06 NM_006383.3 CIB2 Homo sapiens calcium and integrin binding family member 2 (CIB2), 1e-76 291 69.21 0.553511705685619 0 noncoding AGAGAGGAGCAGCAACCTGCCTGAGGCTGCACAGTCAGTCAGCCTGGGCACTGCTGGGCAGTTTCTGGAGTCAGCCAGTGGGTGCTTGCTGGCCTCCCTATATGACCAGGTCACCCTCATCTATGCTCTGCCTCCAGCCAGTGATGGCCTTTATGGGTGGCTCTCAGACCCCTCCTAACACAGGCCCAAACCTGGCTGGCTGCCTGGGCTCAGCCTGGGCACTGCTGGGCGGTTTCTGGAGCCAGCCAGTGGGCGCCCACCGGCCATCCCTATGTAACTGGTCACCATGGACCTAGGCCCATGCCTGATACAAATGTTCACTGGAATGGTTCTCACTATGAGGGACGTGGAGATGATTTTTCACCCAACATCGGCTCTTCGCGGAGCTCCCTAGGATCTGGGGCACAGATATGTCTCCTCCCAAGGACACAGGTACTGAAATAAAGTTGGTGCCGAAGCTGGGAAGGCAGCACTTAACCTCAAGAGGTGAGGTGCTCATGGGGAGATTTCAAGGAGAAAAGGGATCAACAAACCTTTCCTAACCTCGGCAGACACAGAGAACATGAAAGTGTTTTACTATCAGGAGTTCACAAATCTGTGGACAGCACACACCACTGAGGATTCCACGTCGTTGGGGAGGGCGGATGGGGTGGTGCTCCGGACCGGGACAGGGCCCGAGTCCTTGCACCCATGGTTCCCACAGCTTCACCCTGGGAAGGGCCGGGGAGAAGAAACAGACAGGCCCGGGGTGCAGCCCAGCTGTGGGCTCTAGAGAAAGATTGCATAGCTTGTTAAACCTTGTCCTCTGTTTTTCCATTTGCCCTGGGCAACCCGGGTGCCTGCCCAGCACTTGGACAAGTCCGTACCCCAGCCCTGTTAGGGGTTCCTCCTTCCCCCTCCCACTGGGGCCATTTCTGATGGGAGTAGGGAAGGTGGGGGAACAGAGGGAGGGCCTGGGGAGGGCCCACAGGGGGACTAGGAAGGGCCGTGCTCCTCACATCCCCCCTTCCCTGGTTAAGGTTTTTTTTTTTTTTTTTTTTTTGCTGAAAGGGCCAAAAAAGTGTTCGTGGGTGTAAACCCCAAAGGCCACGGCTCCGCTCCTGGGGAGCTTGGAGGTCACACTCGTGCGGGGACCGGGCCGGATGGTCGGCTTCTGGTCACTGTCCTCAGATCCGGATGTGGAAAGTGCTGGAAAG TCONS_00119104 TCONS_00119105 . 5' 1149 TCONS_00119104 TCONS_00119105 . 5' 1149 EMBV3_42176 TGGGCCTCAGCTCGCTTGCTTTCACACAGCTTGATTCCTGAACCCATGTCCTGGTTGTAT Gene GeneID:512902|CRAT:NM_001075587:79_cdna Constitutive 1 NULL GeneID:512902 11 GENE CRAT MGC142781 carnitine acetyltransferase EMBV3_08651 TCAACAAGTTCAGTCTCGGGGTTGAGGAAGGTTCAAGTGATGAGGAGGAGCTGCCCAAGT Gene GeneID:618364|LOC618364:XM_002700311:19_cdna Constitutive 0 NULL GeneID:618364 X GENE LOC618364 NULL similar to melanoma antigen family B, 4 EMBV3_09151 CTTCCTGGGACGGAGGCTGGCACTGAGCCAGGTGCTGGACAGCCTGCGCACCGTTGTTAT Variant GeneID:525690|MGC139367:NM_001083704:150_cdna 507^953 1 EMBV3_31983 GeneID:525690 11 GENE MGC139367 NULL hypothetical LOC525690 EMBV3_26765 CGTGCTATGTCCTAACTCCCTAAACAGCTTGTATTCGCTCAAGTGCTAACAGCGTCTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11358 CCCTATACGGTGGCATTTGCTGGAACTCTGCCTGCAAGCATCGCATACCCTGTAAATATG Gene BVT0101_070957 - 1 EMBV3_26735 GK000012.2:13635027-13945070 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00102 TCTTGACTTCAGAAAAGACCTTGCCACAGTGAACCTGCCCATCCGTACCTCTCCTGGGAG Gene GeneID:100295424|LOC100295424:XM_002692448:469_cdna Constitutive 0 NULL GeneID:100295424 13 GENE LOC100295424 NULL hypothetical protein LOC100295424 EMBV3_17462 GAGATTTCATTGGCAACTGAGGCTGGAGTGGCTTGAGGAGGATGAAAAACTTCCATGTTG Gene BVT0102_034730 + 0 NULL GK000010.2:59544630-59642582 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017434 TCONS_00017438 TCONS_00017432 TCONS_00017435 TCONS_00017437 TCONS_00017436 TCONS_00017433 TCONS_00017439 1 XLOC_009032 Coding TCONS_00017433 XLOC_009032 Coding Coding LOC536144 10:59572592-59620725 j TSS11911 8458 1 TCONS_00017433_3 763 0.147552612910854 13 0.824545001246572 0.000369659031045245 8.41994718128203e-08 0.000538851838862833 8.06430555967243e-05 1.92499120674614e-07 0.000367144283402708 0.000186571308191882 0.000629497132641558 0.00154255517423622 0.000170967835494338 0.000115113777030256 1.16940808809093e-07 0.000158855830135653 2.44953647111379e-05 9.67461770621356e-06 0.00230652231344437 0.000400642659326391 1.34157816922351e-06 0.000805878651908428 2.75534415998758e-07 8.20523547745206e-21 0.000473765046825798 0.00114249982727216 0.000315579029659431 0.000921185927384448 0.000213223800938345 0.000597248714302658 0.000499844860093047 0.000116471767731812 0.000645678187621663 XM_003586581.2 AP4E1 PREDICTED: Bos taurus adaptor-related protein complex 4, epsilon 1 subunit (AP4E1), mRNA. 0.0 4396 100.00 0.288011350200993 NM_007347.4 AP4E1 Homo sapiens adaptor-related protein complex 4, epsilon 1 subunit (AP4E1), transcript variant 1, mRNA. 0.0 3920 89.89 0.346535824071885 TCONS_00017433_3 sp|Q9UPM8|AP4E1_HUMAN AP4E1_HUMAN AP-4 complex subunit epsilon-1; 0.0 1394 87.94 0.998689384010485 2 coding 0 0 1 1 -0.015282818967662 0.91907954037281 0.0494088856539127 0.480395698474267 AGGAGGGCATAGCAACCCACTCCTGGATTCTGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCTGTACGGTCGCAGAGAGGTCGCAGAGAGTCAGACATGACAGCGACTTAGCACGCACACAGGATCTTATTATGTAATGAGAAGAATAAGGCATCAGAGGACTGAAGGCTCTTACCTATGTTATCCAACAGGATCCCACTCAGGCTCTTCAACATCAGATGACAATAATTGAATGCTTAGATCATCCTGATCCCATTATTAAAAGAGAGACTCTGGAACTTCTTTACAGAATTACTAATGCACAGAATATAACAGTGATTGTCCAGAAAATGCTTGAATATTTACATCAGAGCAAAGAAGAATATATTATCGTCAATTTGGTTGGAAAAATAGCTGAGCTGGCTGAGAAATATGCTCCTGATAACGCGTGGTTTATTCAGACAATGAATGCTGTATTTTCAGTGGGAGGAGATGTGATGCATCCTGATATTCCCAATAACTTTCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAACAGAAAATCAACAACTAAGACTTTATGCAGTTCAGTCTTATCTTACTTTACTAGATGTGGAAAATGTGTTCTATCCACAGAGATTTCTTCAAGTTATGAGTTGGGTGTTAGGAGAGTATTCCTATCTCTTAAATAAGGAAACACCAGAGGAAGTTATAACCAAGCTCTACAAGTTACTTATGAATGACTCCATTTCTTCAGAAACAAAAGCCTGGATAATAGCTGCTGTGACCAAGTTGACACCCCAAGCACACTCTTCTAATATAGTTGAGAGATTAATCCAGGAATTTACCACATCTTTGGATACTTGCTTGAGACAGCATGCATTTGAATTAAAACACTTGCATGAGAATATAAAATTGATGAAGAGCTTACTTCCACTTGATAAGAGTTGTGAAGACATGGTGGTAGATGCTTCCTTATCTTTTCTGGATGGTTTTGTGGCTGAAGAACTAACACAGGGGGCAGCGCCTTACAAACCTCACCACCAACGGCAGGAAGAAAAGCTTTCTCAGGAAAAAGTTCTCAATTTTGAACCATATGGACTCTCTTTTTCTTCATCTGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATATATCTGGGAATAGTACAGAGACCGGACTAAAAGAGACAAATGGCTTGAAGCTGGAAGGTATAAAGAAATTGTGGGGGAAAGAGGGCTATCTTCCCAAGAAAGAAAGCAAAACTGGTGATGAAACAGAAGCTCTGCCAGTTCCTCAGGAGAGTATAATGATGGAGAATGGAGATCAAACTGTAACAAAAAAGGATCCATCTCAAGTCCTTACCCAATCTAAAGAGGAGAAAGAAAAGCAGCTGCTGGCATCATCATTGTTTGTTGGGCTAGGATCAGAAAGTACAATCAATTTGCTCGGAAAAGCAGATACCATTTCTCACAAGTTTAGAAGGAAATCAAAAATCAAAGAAACCAAAAGTGAGGAAACAACCACTGATCAAAATATAATCCGTTCTTCCTTTAGTTCTTCATCAAATGTGACTTACGAAGAAGATTATTGTTTGGATAATTTGCAGGATAGAGGAGACAAAGAATTAAAGAAATTTTCTCTCAGTTCAGAACTTTTGGATTCTGAGTCACTGACAGAACTGCCCTTGGTTGAGAAAATCTCAAATTGCAGGCTGTCTACACCCTCTTTGTTTGCTGATAACAACATGGAAGTTTTTCATCCTCCTCAAGCCACTCCAGCCTCAGTTGCCAATGAAATCTCTTTAGCTTCTTCTTTGTTGGAAGAAACTACTGAACACATACATTCAGATCTTATGGAGGTCTGTAATAATGAAGCCATATCTGTGTCTTCTTACAAAATTTGGAAAGATGATTGTTTGTTGGTGGTCTGGTCAGTTTTTAATAAGAGTGGTTTGGAACTGAAAAGTGCTAACTTAGAAATGGCTCCTGCAGAAAATTTCAAGATCACTGAGCAACCTGGATGCTGTTTGCCCGTAATAGAAGCAGAAAGCACCAAAATTTTTCAATATAGTGTGCAGATGGAAAAACCATTTACAGAAGGAAATCTGTCTGGTTTTATAACTTATCAAGTGATGGATACTCACTCTGTTCAGCTTGAATTTTCAGTAAACTTATCACTGTTAGATTTCATTAGGCCATTAAAAATCTCGACTGAAGACTTTGGTAAACTCTGGTTATCCTTTGCAAATGATGTGAAACAAAATGTAAAGATGTCAGAATCTCAAGCTGCTCTGCGTTCTACCTTAAAGGCCCTGCAACGGGAACTAAGACTTCATGTTGTTGACATTATAGGTAATGAAGGGCTGTTGGCCTGTCAACTGCTCCCATCCGTCCCCTGCTTGCTGCATTTCCGAGTTCATGGTGACACGTTAGCCCTGTGGTTCAGATCCTCCTGTTCTACTCTTCCTGACTATTTACTTTATCAGTGTCAAAAAGTGATGGAGGGATCCTAGCAAAAGCTCTGCTTATATTTTACTCCATCAAAATAAATGGTTTACATAGATAAACTTATTTACCAAAGTAAAAAGAATTAATGGTACTTCTAATGAAAATGGGGATTATTACAGGTTGTGGTTTTATGTTTTCTTTATGGTTCATGATCAAGAAAGATCCCCAAGAAACTGTACCCCTAACCTTTTACTCAGGATTGTACAGTAGGTTTGGGTCCTAAAAAAGTGGCCTAAGCTAATGTTATAAACTGCTAAAGATTTATATATATCACTTAGTGTAGAGGGTCTGAAAATAATTTATTTTGTTATAAATAATTTTATAGCAGATTTACTCTAGTGTTAAAGCTGATTTATAGTAAAGCCAGGTCTCAGTTTTCTGCGTTAATGGAGGGGAGACATGGACTTAATAATCCTAAATCAAATTCATATTTGGCTTTGGAATGCAGTATATGCTTTTTGGTCAGCAAGTCATTACTTTCAATAATGTTTGCTTAGATCAGTACTGAGCTAAGTTGGCACAGCACATACTAATACTTCAGGAGACCCATAAGCACGTTGGATTTTGGGGGGATCCAATCTATGGTAGATGGACTTCCCTCACAGCTCAGTCAGTAAAGAATCTACCTGCAATGCAGGAGACCTGGGTTCAATTCCTGGGTTGGGAAGATCCCCTGGAGAAGGAAATGGCAATCCACTCCAGTATTCTTGCCTGGAAAAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATGGGGTCGCAAAGAGTCAGACACGACTTAGCGACTAAACCACCACAATCTATGGTAGAGTTTTTATTATAACTTGATACACATAATTGCAAACAATTTGGCTACAAAATTTGTTTTCCACTTGCATTAATTTTTAAAATTCAAAATGAATTACTGTGTTCTTGTTTTCAAAACTCAGAGCCATTTACATAATACTATCATTTAGAAACAAAACCTGTTAAGAGCACACAGTACTAAAGTAAACAGGTATAAAAGGACTTTTCAGTTATGGCAAATATCTTAGTTACCACTTAGATTTTTTGGGCACATTAAAATATGTGAATAGAGTACAAATGGCAAAACCATCTTTCCTGGCCTTTGAATCCACTAGTACTCAATGGATGCAACGAGAAGAGTGGTAGTCTAAGTTTACCATACAGAATCTTCAGTAAAATATGATTTTCATGTTACAGTTGTGCCTATATGACCTCTGTGAGAACTATTATCAGTAAAAGAGGTTAAGCCTGATATGAATGATAGACCAGAATCTTATGATTATACATTTATGTTAAAAACAGAGTATTTTATAAAACCTTATGGTGCTGTGGAAAATATTTATTATTTCACTTTTTCTGATACTTCATGGTAGAAACTATTCAGGTAATATAGTTTTAAGTCATTGTAGTTAATACTCTGGTTAATTGGTACTGTTTATCACCCAGGTGTGGAATTGTGGTTTTAGGTTGTCTCATTAGTCATAACTGATAGGGAATTCCCCAAAGCTGATAGACTTCACTGGTTATTGTGTTTAGCGTATGTCTCCCTAAAAACAAAAGCCACGTTAAGAAATTGATTTTTAAGTTACTCATTAAAAAAATACCTTGTTAATTTCATACTTCTAAAAAGCATGCAGTAAAACCTTGCTACAAGAGCAATAAGTGGTTAGAATTTCCTGAGTAGGTTTTTTCTTTTGAATAGAATATTAGATTCATCCTCAAGCTCTCAGCAGTGTCATGACGATAGGAATATGAATGTTGGGAGAGTGTGGACACTGTTGGCTTTCTCTTTAGTGCTGCCTCTGTCAGCAGCACCCTCCCACCCCACCTAGTTCTGTTGATACTCTGACAAAGAGATAGGAAGTGCCCTCTCACTTTGTGAAGGAATGTAAAGTGTAGCAAAAGAGGTGCTTCATATTTTTGTGTCCCTGCTTCCATTAGTTTGTGTGGTCACCACGGCTGGGTGGAGTGTGGAGCAGTGGATGTAAAGGTTCCCAACAAGCAGGTGGACAGCTAGCTGGGAGAGATTACAGTGAGCTGTTGTGCTGCTTTGTTACAGGGTTGGCAGCAGCAGTTGTCATGAGAGACGTGCTTGGCCCACAGTGCAAATGGTGGGAAATGTGGAATGGTAGGTTAGGGCTGGGAGTATGATTTGGGGTCTGTCAGAGGTAACATGGTGTCACTTTTGTTCTTTCTGAACCCACTGCATAAAGTAGGATAAAAGGATTTCTGCTGAATGTTTAATAGAATGTTTACATTTTTATATTTTTATGGTTTTTAAAAATAGGAAGGAGTAGATTTTAAAGAACTTCAGAGCAGTATAAATTCTGCCTAAACTAATGAATGTTTTAAGTTCTAGATGAGGCATTGCCAGCCTTTTCTGCATTATAGGAGATGTGACGAAGTAGGAAGAACAAACTTTTTGGGGGCAAGATTGTCTCTTTATGTTACAGTTCAGTCAAGTAAAGGGGTGACATCTGGAGTGAGAGCTCTTGTGGAGGGGAGATGCAGCTGGTGAGTTCTCTGCTGGGCATCTTTGCTGAGAACACAGGTGGCAATGAGTGTGAATCTGGGGAGAATAAAGGGAAGACAGGAAAGCCTTAAGAGACAGTGGAGGAAGAAGGAGCAGGCTTCCACCAGAGGAGTAGATTAGTCGCAGGGGAGTGTGGGCCCTGAGAATGGGTCCTTCCGAAAAAAACTGCAGATGGAAGCTGAACAGTTACCAAGTGCTAATGTGCCAAGCATGCCAAGCACAGCATGTGCTCTGCAGAGGAGCAGTATTTAAAAAAAATATTCTATAGTCTATGGAAACAATTTTGGTTAAAACGCAGTGTTTTATTTTTTCCTTTATTTTAGTTCATGTCATTTGTGTTTTAAAATATCAAGCAGTTTTTTTTTAGGGGTTAATGTGGTCTTTATCTCATGTTTGTGAGCCACTGAAAGTGCACTGAACCTATTCACATGTCTTTTAAGGTGTTGTTTTCATTTGTTTTAAAATGTTAGGAGGGAAAAATGCAAGGGAATAACAGCTTACCAGGCATTAGTTGCCTTATTTTGGAGTTGAATTCTGTAATTTGAAGAAATTCAGTTAAACATGTAATAAATGCAAAGTGATCTATGTTGTTGTTCTTCAGTCTATATATTCTTTATCATCTAAAAGTAATACTATTCAGTAATTTGATAGGCATTAGCTAAAAAGAGCAGAAGCAATTGGAATGGGATGAAAAAAGTGATTTACTTATTATAGCCCCAAAGCATGTCATATAATTGGTTAAAAGTAAAGACACTGCTCTTTCTGTATGATGTTCAGAGAAAACTTTATGGGCTTCTGACAGGTTAGAGCATGGATTGATCCTCAGGAACTTGTCCATATCCCCTGCTTTCATCCTAGCCTTACCAGAGCATTCAAAGCAGTGTTTTGTTTCCATATTGCCTCTCCTCAAGATGCAAGAAACACGGTAAGTCAGGTGGTGACTTCTTATCTAAAGATTCTAAATCTTCTGGCCATCTCTGCATTGCGTATCCTAAGACACAAAGAAGTGATATTTAAATCTCACTTACAGATGCCTCTTGTTGGCTATAATGCATAGTAGGAAAAATGTTCTGGGGCTTGAAACTGATATTTGGGGCACAGAAGGTAAAGGAGGTTTAAATGCCTCACACCCATTGCAATAATTAAAAAGAAGGATGGCCTGCAGCCAAATGGGCCAGGGGTAATGATTATATGAAATTTACTTGTTATGTGTGTGCATAAAAAGAGGCTGTGAGCTTTTTAGAGCTAGGAACCAGGTGTATATTTTTATGTCCCTTTTGCCTGGTACCTAGCAGTGTATTGAATGAATGACTAAAAAGACCTGTTCCCTAAAAATAAGTAATCTGAAGTGAAAGTTACTCAGTTGTGTCCAGCTCTTTGCAACCTCATGGACTATACAGTCCATGGAATTCTCCAGGCCAGAATACTGGAGTGGGTAGCCTTTCCCTCTCCAGGGGATCTTCCGAACCCAGGGATCAAACCCAGGTCTCTTGCATTGCAGGGGAATTCTTTACCAGCTGAGCCACAAGGGAAGCCCAAGAATACTGGAGTGGGTAGCCTATCCCTTCTCCAGGGTGTCTTCCTGACCCAGGAATCGAACTGTGGTCTCCTGCATTGCAGGCAGATTCTTTACCAACTGAGCTATCTGAGACCAGGTAATATCCAGGGATTGATTTTAGTAATCCTGTGGCTGTCCTAGAAATAAAGAAAAGGGACTGATCTGGCTTATAGATAGAAGTCAGCAGAAAAGGGTTCCAATGGAAATAACTTGTTTGTACCAGGTAGGAGAGGAGAAATATGACCACTTGAAGAGACCCTTACCAGCCTCAGTCCCATGAAAATGTGCTATGTCATTTAAGAGATCTTTCTGCAAAGGAAATGTGATTACAGATAGAAATTATGACTTGGAGAATGGGTACTGTTCTATAATATGTCAGATGTTTATGAGTTCTTACTGGTCTATAAGAACTTTTTCTAGGATGAAAAATGGTAGACATTTGGTCAGTGAAATTAAATATAGGGAGGTAATGAATATAAGGCAGATTTACCAGCTAAATTAGTATCACCTATTTTTTTAGAAAAGTGAGAACTATGATAAGGGGAGAGTTTAATGTAGTTACTAATGGGAGAGTTAATATAGTTTAAAATCAACTATATTGATATTAAAAAGGTCAGTAGCATCAGGAAAGTTGGGAAAGAACAGGCCGCCTGGGATAGGGCACGAGAAAAGGAAATGTTCATTTGCATCACACAGGAAATGTTATGGTAGGTACATGGATCCAAGATAAGAGGATACCCCCAGAAATGAATCCCAGAGAACCATGAGCACTTAAAGATTGTAGCCTAGATGCAGAGAGGATGGGCCTGTGTGTGTGGAAAGTCAAAACAAGTTTACTGGAACACTTATAACGCTGGAAAACTAGTGGGTCCTCATAACTGATTGTGGCTAGATTGTGGGCTTTTCTCCAAGAGAAAAGGACTCAATTTCCTTTAGTTAGTTTGAACTATTTTCCTAAGTGGATGAGTGCTTTTCCTTTCTTAAACTTTAAGCTGCCTTTGTGACTAAATGGCTGACCTCAGGACGTTTTTTCCCTGACGGGGTCTGACAGGACTTAGGCCAAATGGATAGAGACTAGAGCCTAGAGATTATTCATGCTTCCAAGAGAGAAAAGTAATTAGAAGTTTAATTGCACATCTCCACACTTTAAGTGTGTGCATACTTAGTGTCTGACTCTGCCCTTTATATTATATGACAAATAGGAACAGAGGCAAGGCATATATATTCTTAGGGAGAGGCATTTAGTCTGATTTGCTGCCTTGTAATTTAATGAAGTTAAGGGCAGTATCTATGACTAGAACAAACTGGTCCTCATTGATCATGGATATCAATGTATAAGAATTTAGTTTTTTCATCTTGGTTGATGGTTAGTGGGGTTAAGTAGAACAGTTTTGAGCCTTGAAAGGAAAGGTGAAATTATTTGAACCCAAACATCGGACAAGTCTTCACCTCCAGAAGCAATAAGAGTGTCTTTTCTTATTTATATTAAGCCTTTTTGAACACACTTGAGTTAATGCTAATGAAAAGACTTTGGCCTGTGGTTCACCCATAGTCTCAGAAAGGGGCTGGTCACCAGAGAGACCAAGTACTTAGAGAGTTAGAACTTTCAACCCTACCCACTGACCTCAAGGAAGGGAAAGATTTGAGGGCTGGAGATTAAGCTCAAAAAATTTTTTACTAAACAAAGGAATTTGATGAGCTTATGTGTTGGTGAATGCATCACATTCTGGGAGGGGACACATCCCAGTTCCAGTGAGGACCGAAATTCCTGTGGTTGGGACCCTTCTGTTGCTCACCCTCTATACGTCTTCATTTGTATCCTTTATAATAAACTGGTAAACAT EMBV3_26381 GGTTCTGTGCAGCATTTTCATATCCCTCTTTCTGAGGCAAATACCTGTTTGGGCAGCCAG Gene GeneID:781575|TOMM20:NM_001099183:123_cdna UTR3_Alt 1 NULL GeneID:781575 28 GENE TOMM20 MGC166409 translocase of outer mitochondrial membrane 20 homolog (yeast) EMBV3_43294 TGCTGAGACGCAGAAAAAGTTCCCCAGTGACCTGGCTGCAGCCGACATCTCTGCCTACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02351 ACTTGAGCGAAAGATGAAAATTTCTGGTGTGATCAGCCTCAGGGAGTTGAAAGCTGAGGG Gene BVV0102_185672 + 0 NULL GK000015.2:33353471-33827888 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08453 TCATCGTCCTGCTGCGCTGGCCTCTCTTGGGCATGTGCCTGGAAACCTATGGCTTCTTTA Gene GeneID:508464|GOLT1A:NM_001075361:40_cdna Constitutive 1 NULL GeneID:508464 16 GENE GOLT1A NULL golgi transport 1 homolog A (S. cerevisiae) EMBV3_03349 TGGCAGGCTACAGTCCACGAGGTCGCAGAGTCGGGTACGACTGAGACACAACTGAGTATA Gene BVT0102_358938 + 1 EMBV3_14296 GK000007.2:21654930-21661196 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32799 GGAAGAACTCCATCCTCAAACAGCCTGGTTCAAAGGAGGATGACCCCTTCTTCTATGACG Gene GeneID:505584|FXYD5:XM_002694929:17_cdna Constitutive 0 NULL GeneID:505584 18 GENE FXYD5 NULL FXYD domain containing ion transport regulator 5 EMBV3_18226 ACTCTGAATCTCGAGTAGGGAGAGGGAGAGGGCAGAAAATCTTTGATAAGCAGCACTGGT Gene GeneID:530230|CCDC91:XM_002687721:7_cdna Constitutive 0 NULL GeneID:530230 5 GENE CCDC91 NULL coiled-coil domain containing 91 EMBV3_31879 GATGCAAGTCGTCAGGACCACTGCTCTGAACACAAGTCAGAGAAAAGAAGCTTCAAGGCT Gene BVV0102_257960 - 1 EMBV3_40659 GK000014.2:78715803-78760472 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053967 TCONS_00053966 1 XLOC_031869 NonCoding TCONS_00053966 XLOC_031869 NonCoding NonCoding - 14:78727488-78730101 - TSS39701 1344 2 TCONS_00053966_1 43 2 0.486217457886677 1.89913349730263e-09 0 6.87844697249213e-06 0 0 0 3.47080930752336e-05 7.04090766885651e-05 4.10882831520549e-05 7.04083797328996e-05 8.60447532316745e-06 1.24847095749891e-11 0 0 0 0.00049470061441764 2.74885676609706e-10 1.86492876145281e-05 0 0 0 7.36831045272917e-09 6.68856401057834e-05 0.000399152328273935 0 0 0 7.13939291361975e-06 8.98050109023614e-06 2.99035560026878e-10 0 noncoding 0 0 0 0 CCATGATGTGTCTTTTGTGGAGAAAAGCCATTGCTTTGAATAAGGATATTGATTTGAGAAGAAAGTCGTGAGAGAAAGTTTAAATTTTAAATCGATCAATCCAAAAGAAAAAAACAACAACAAAGCCTTGAAGCTTCTTTTCTCTGACTTGTGTTCAGAGCAGTGGTCCTGACGACTTGCATCTGTGTGACTGTGACCCTCCTCAGTCCTGTGATCCTCTCTCTCGTTGGAACAGCAGGTCTTTACATTGGGGCTGTTCCCGGAAAAACTTAAGCTACGTATCAACCTTATTTTTATCGTCTTAGTACATATTGTGGTTAAAAAACATGCTAAACCCATGATTCTTTCTAAGTTTCAGTGGAAAGGATCAGTTGGCATTTGTTTAAGGAGCCTATTGTTTTCGTCTATTTCCACTGACTGACCAGTTCTTTGGGAAAAAAAGTGACAATAAACTCATCTCTTTTTGTCCTTCAGGCTGTGAAATGTGTTGATGTTTAGATGTGACTACCCAGAAAGGAAAGTGTACATCATACTCAGGAATTTCAGTGTGCTACATTAGAAGTTTTTGATAAGAAAACCAAGCCTCAGAGAGGGTGGTGAATACAACCGAGTAGGAGAACTGAAGTTTGGACTCTGCTGACATTGTCCAGCATGCTCTTCTCACACTAGGAACTGGCACTTTGAAACTGGAGAGTTAGCAGATCTCCACGGCTGCTTACCTGCTGGGAACTGAGAAGCCTTCATGTATTTGGAGATAGGCAGGCCGCGTTGTGGGGTGAATGTCGCTTTGGGTTGTGCTGTCTAGTGGCCAGTGCAGGGCAGAGGGGTGCTGGCCTCAGCAGCGGGCCTGGGTTTGGCCTTGACATTAGGAACCTTTCTGTGTGTCCCTCAGCGGTTCTCTCAATCACCTCTCAGCCTCAGCTTCGGCTCTGATTGGTGACTCGGTGCTTTTTGCTACTTCAGAGCAAATACTGTGTATTTGAAAAATACCAAGCCTTTAACATTTTTGAATTTGAAGGAAAGTTTTATAGGCACATATTATTAAAATACTGCACTTTGAAAGAAATGACAGATTATTGATGGAAATGTTTGTCATTTTGAAATATGAACTGTTACATGATGTAATTAACTTGAAATTTGATCTTTGCAGAGTGAGAATGTTACATTGGCCTGGATGTTGTTTCCCAGAATACATGGAAATGATTTATTAAACACAGTCCCAGCAGTCTACCTTCTTCATTGTTATGTGTTTATGCTTTTTACACATTCCTTGTTTTAAAATACTTTTTGAACTTTCAGGGAAAGCATTTTTAGTGACCTAGCTTAAAAGCCCCACAAAACCAC TCONS_00053962 TCONS_00053963 s 5' 27756 TCONS_00053962 TCONS_00053963 s 5' 28531 EMBV3_10976 AATAGCATTATAAGAATCGGGCTGAGGAGGTGGAGAAACAGTACGAGGTGGACCTGGGTC Gene BVV0102_010098 - 1 EMBV3_34283 GK000029.2:5618338-5649510 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20906 CTCAGTTACGTAGCCAGAGCGAAGCCTAAAATCGTCATCTACTGGCTGGCGGAGGTAAAG Gene GeneID:768044|NUDT2:NM_001077102:73_cdna Constitutive 0 NULL GeneID:768044 8 GENE NUDT2 MGC137572 nudix (nucleoside diphosphate linked moiety X)-type motif 2 EMBV3_11443 TGCGGTGATTCTTTACCACTGAGCCACCAGGGAAGCCCCCGATTTCTTACAGAAGAAGGA Gene GeneID:768037|TNFRSF19:NM_001077096:85_cdna Constitutive 0 NULL GeneID:768037 12 GENE TNFRSF19 MGC137986 tumor necrosis factor receptor superfamily, member 19 EMBV3_27324 ATGGAGAACATGCAACTGCGCATATGTTGCGGAATGGAGGACCGTGGGATGGGGCTTTTC Gene BVT0102_157227 - 0 NULL GK000006.2:108523818-108696530 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210780 1 XLOC_129290 NonCoding TCONS_00210780 XLOC_129290 NonCoding NonCoding - 6:108547019-108548371 - TSS158287 1352 4 TCONS_00210780_3 112 1 0 0.00115225688776906 0.000500686944604149 0.000164386254214379 0.000158365012507254 6.74053907514632e-05 1.56540205924465e-05 0.000298558954778431 0.000372367765127583 6.61401771686339e-05 0 1.69318265126352e-06 2.64473889934066e-06 1.2733492776293e-06 8.69821156861744e-06 0.000312685346977797 1.95351833265194e-05 2.45596015626672e-05 0.0133221328455932 0.000133924518274545 0.000121452988108221 5.13439548010963e-05 6.22048055119846e-05 1.01783193606178e-05 5.88994059805597e-05 0.000204130406853221 0.00011082378712697 0.000164030556396594 4.78364181410867e-05 1.61580697291775e-05 6.67038708621519e-06 XR_231488.1 LOC101906551 PREDICTED: Bos taurus uncharacterized LOC101906551 (LOC101906551), 0.0 1851 89.43 0.999260355029586 0 noncoding CCTCGCCGCCTCTTCGGCCGCCCTTCTGGCCACCGGCGCCCATTCTTCCTGACCCGGGCCTCTGGCCCATACCGTGTACTCCACGTTCATGTTCGAGGCCACTTTGGCTCCGCTAGGTGGGCTTGCGAGTCCGCGCACCCGCACGCGGCGCCTGGCGCACCCGCTTCGGCGGACGGAGCTGGCCCGACTCCTCGCCTTGGTGTTCCCCTCCCGCAGCAGGAGATCGGGGGCGCCGAGAACCGGAACGCAGGGGACCCTCAGGCCTCCGGGGCCGCACACCGGCTCCGCACACGCCAGCGTAGCGCCCCCGAAACGCGCCTGGCCTCCAGCTCAGCGCTGAGCAGAGGGCGGCCTCGAACCCGGACTTGGACACTTGTAAACCTTGGAGCAGCATCGCACGTCGTGTTCCACGAACGACTGTTGCTGACTCATAGGGAGATTTCCCGGGATTCCTGCCCAGGGCCAGCAAACCTCTCAGTGGGCTCCCCGCAGAGTCCAGGGCAGCCACAGACCAGGGGTCACAGGCTCTTGTGTGGTCACCCACCTAGGCACCTTAAAACCAAGGTCCCCTTGGACTCCAGGCCCGGCAAAGGTCAGTCACTAATGCACACTGGGATGCCCCTGGCCCCCGCTGAGCCTGACGGCCCTCCAGCTTATCTGACTGGGCTTGAGTGTCCTCCCGTGGCCGGAAAAGCCCCATCCCACGGTCCGCCATTCCGCAACATATGCGCAGTTGCATGTTCTCCATCCAGGGTCCCCACCTTGGATGCCCTGCTGAGTAGGAGACTGCCACTCACCAGCACCAAGAGGCCTTTGGGTGCCCCGCAACTTGGGGAACCAAAGTCCAAGGTCTGGCTCAGTCTCCTCCCAGGACAAGGGGCCACCTTCATATGCAGCTGAGAGCGCCCTGCGGACCCCTGCCCGCTGCCCACCAAGCTGCCTGCAGTTGAGGCCCCTCTCAGCCAAGGGCCATCCAGCAGGAGCAGACAGAAGCCCACAGACCCTCATCTTCTCATGGACCATGAAGCTGGGGTCTGCGCCGAGCACTCCCTGGTCAGCAGAGAGCAGCAGTCCCCTCACATTAAGGGCCCCCCGAAACTCCATCTGCCTGCACGGCCTCCTTCCAACCTCTCTGCACCTGGCAATGCCTTTGGCGGGGGGCTGCCCCTGGCCTGCCCTCAGAATGCCACGTGCGCTCGCCCACCTGTATTCTCCAGCCCCTTTGTTCCCAAGATGGGCTCCCCACTCAGCCAAGGGAAACCTCCCTCTCGCAGAGAGGCCCACCTGCATCTCCACAGCCCTGCAGACCCTCCCTCCAGGCCTTCCAACACTGACCCTTCACCCCCTCAAGG TCONS_00204130 TCONS_00204131 TCONS_00204132 TCONS_00204133 . 5' 10961 TCONS_00204130 TCONS_00204131 TCONS_00204132 TCONS_00204133 . 5' 10961 EMBV3_22645 GCGCCGTGGGGCGCCCCAGGACCAGGAGCTGTGCTGTGCACAGCACCTGCCAAATACACA Variant GeneID:506163|MOSPD3:NM_001034265:98_cdna 151^322 4 EMBV3_04595 GeneID:506163 25 GENE MOSPD3 MGC127964 motile sperm domain containing 3 EMBV3_21125 GACAAAGCTCCTGTGTTGGTGATGGTCAGAGCTGGTGTCAGAAGCATCGCTTGGTAGAGA Gene BVT0101_076089 + 1 EMBV3_01115 GK000013.2:30123391-30340579 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044917 1 XLOC_026312 NonCoding TCONS_00044917 XLOC_026312 NonCoding NonCoding LOC100848562 13:30213500-30235488 = TSS32908 564 1 TCONS_00044917_2 97 2 0.974439441488152 0.000337730901070037 0.000552307753261322 0.000918836618094998 0.00270914913344076 8.75386428833549e-06 0.000101476951605138 2.067987107978e-05 0 0 0 0 0 0 0 8.69895083321415e-07 4.68290882165827e-05 0 0 0.00170373233122818 0.00272865601385494 0.000177622884303859 0 0 0.000208071805627713 0.000663365700077926 0 2.07771324558168e-05 0 0 0 XR_227489.1 LOC100848562 PREDICTED: Bos taurus uncharacterized LOC100848562 (LOC100848562), 0.0 798 100.00 0.781914893617021 0 noncoding 0 0 0 0 -0.357192897434485 0.0962517332905357 0.0348969451575951 0.580651335061101 ATGACGTCCTCCAGATTTCTAAGGTGGTGTGGAGCCCACGTGAGCCGTTTGCCAAGGGCTCCTGACTGTGAGCTCAACTCAACAAGATGCCGGCCGAGCGCGCCCGCTCCCGGAAGTGGAAGGGACAGACTCCCAGAAGCGGAAGCAGCTACAGGAGCTCGGGCTCCAGGAGACGCCTTGGGCCTCCTTCACCACTTCACCTCTCTATGCATTCATTTTTCAGTCTGTGAAAAGGATGATTTCAAAGCGCCTTTCCCATCTGTTTCCTACTCCTCTCACATGGAGCTGGTCTGAGGGAAGAGAAGTGAGCCTACTCGCTCTGGGCCAGAGGTCTGATTGCCTGAAGTGGTATAGAAGAGCTGGTGACAAGCTCCTGTGTTGGTGATGGTCAGAGCTGGTGTCAGAAGCATCGCTTGGTAGAGAAATATCTCTGCTTCCAGGCAGCCAGCTGGGAGTGAGAAGTGTTACATCAACATTCATTGACTTCTGAATCTCATCTCCTACCCTCTCAAAATCTCTCCTCAGGTTAGCTCATCTAATTAAAGAATGAATGTAGGAATCAAA EMBV3_41946 AGAATCTTGAGTTTAGGGATATTGTGACCTTATGGAGGGAGCGGTGCTGAGGGTGTGGAG Gene GeneID:514000|ARMC1:NM_001015594:22_cdna UTR3_Alt 2 NULL GeneID:514000 14 GENE ARMC1 NULL armadillo repeat containing 1 EMBV3_34528 TCTGCAGTGGAACCCTCTGAACTTCTTTTTAGGTGGTTGGGATGCTGTCAGCTGTCAAAG Gene BVV0102_383459 + 0 NULL GK000030.2:90558296-90638627 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23871 CTAAAACCTGTGATGCCGTAAGAATAAGAGCGAAGGCTTTATACCAGTAGACGCTGAGTC Gene GeneID:515461|TMEM66:NM_001076856:22_cdna Constitutive 0 NULL GeneID:515461 27 GENE TMEM66 MGC139371 transmembrane protein 66 EMBV3_31810 TGAGCTGAGCGGACCTGGAGGAGGCAGCAGCGCTGCTGGGACATTGCCTTGGGTCCCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17972 GAAGAGTGAGAGAGAGCTATTAGAGATTGTGAAGAAGAATTTTGACCTCCGCCCTGGGGT Gene GeneID:527403|MAT2A:NM_001101131:98_cdna UTR3_Alt 4 NULL GeneID:527403 11 GENE MAT2A NULL methionine adenosyltransferase II, alpha EMBV3_16762 GAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTAGG Gene BVT0102_050034 + 0 NULL GK000028.2:623067-777721 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00117923 TCONS_00222868 TCONS_00238581 TCONS_00118040 TCONS_00210913 TCONS_00253104 TCONS_00219592 TCONS_00250203 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00132066 TCONS_00232829 TCONS_00174807 TCONS_00250681 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00078426 TCONS_00207934 TCONS_00174805 TCONS_00171428 TCONS_00175564 TCONS_00206300 TCONS_00080712 TCONS_00207933 TCONS_00242416 TCONS_00205125 TCONS_00174806 TCONS_00118487 TCONS_00056149 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00001866 TCONS_00246741 TCONS_00103962 TCONS_00001865 36 XLOC_105290 XLOC_072089 XLOC_136175 XLOC_145248 XLOC_072206 XLOC_129423 XLOC_156045 XLOC_132911 XLOC_153146 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_083377 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_153624 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_126448 XLOC_103815 XLOC_105345 XLOC_124877 XLOC_049596 XLOC_149080 XLOC_124587 XLOC_072644 XLOC_033952 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_151107 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_02625 GACAGAACAAAGCTGCTTTTTAGGACTGAACAATCTATTTTCAAAGCACTGGTACCTGTG Gene GeneID:515561|ZNF462:XM_002689904:5_cdna Constitutive 2 NULL GeneID:515561 8 GENE ZNF462 NULL zinc finger protein 462 EMBV3_40645 CGAAACGTCTCCGGTAAACAGGATCTATACTCATTGCGCCTACAAATGCCTGTCAGCTCC Gene BVT0102_260400 + 0 NULL GK000003.2:52578962-52691875 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177545 1 XLOC_107319 NonCoding TCONS_00177545 XLOC_107319 NonCoding NonCoding - 3:52682152-52682580 - TSS132304 428 1 TCONS_00177545_1 72 1 0 6.35781315812982e-05 2.34775932327578e-05 0 0 0 0.00284994732068165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.7379149052036e-05 0 0 0 0 noncoding 0 0 0 0 GGGAGAAAATCATATTTATCGGATTGGCATTTCTCTTAACGGAGCTCTTTCCTAATGATATTTACTTAACTGCATTTGACAGCAGTTACGAAACGTCTCCGGTAAACAGGATCTATACTCATTGCGCCTACAAATGCCTGTCAGCTCCTAAACCAATCGCAGTAATAACCGCTGGATCATCTTAAATGTGGCTAAACCGATGTTGGACAAAATCAATCTGCCATATGCTGGCTCTGAAGGAAGTCACTTGCACAGTTTGACGAATTGCTTGCAGTCCCTCCAGCAATCCATATCTCGCTCTCTTTCTTCCTCTTCGTCTCTCATTCCCTGCACCCCCTTCTCCCCCCTTCTCCTTGAGCCGTTCCCTCTTCCATTTTACCCTTTCTCGCCGACTCCAGGTAATCTGAAATGGCACTGACCCCTTCTCA TCONS_00169927 . 5' 7975 TCONS_00169927 . 5' 7975 EMBV3_10541 CGCACACAGAGGGTATGTATTTGTTTTGGCTTTAGTTGCAGCATGCAAACTCTCGGTTGC Gene BVT0102_325985 + 0 NULL GK000006.2:98933787-98961483 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23116 GGTCCTCATCCAGGCTTGCATCTTGTGGGCAGATTCAGTTCCTTGGCGTCATTGAGACAT Gene BVT0102_072730 + 1 EMBV3_42819 GK000027.2:15462320-15476696 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16867 AAAAGCTTCTTGGCCCACGTCGTTTGGTGCTTTAGCAACCCTGGGAGATTAAGTTGTTCT Gene BVT0102_017123 + 0 NULL GK000019.2:10593842-10634792 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092171 TCONS_00092173 TCONS_00092175 TCONS_00092178 TCONS_00092179 1 XLOC_056837 Coding TCONS_00092178 XLOC_056837 Coding Coding YPEL2 19:10546156-10598370 = TSS69449 5419 2 TCONS_00092178_3 124 5 0.896309348246605 1.35872630060834e-06 0.000688076390732306 8.76748285209258e-05 5.00976883739089e-05 0.000783433883467416 5.58582964300739e-05 4.30554227095762e-20 0.00034807315131469 0.000203617088774255 0.000315575517412266 0.000942958761986907 3.87643261978308e-05 0.000129945443167514 0.000311382185238006 0.000179182162036953 9.87629369957604e-07 0.000435507491715395 3.9022992554944e-11 0.00118952386313562 0.000210441065644713 0.000154064060383452 0.000120771021131748 1.73959010119191e-18 0.000139897402193073 0.00138742765976709 0.00113257624331882 0.000499877455587471 0.00037154134688327 0.000303422392746099 0.00121375023714794 XM_005219929.1 YPEL2 PREDICTED: Bos taurus yippee-like 2 (Drosophila) (YPEL2), 0.0 9506 100.00 0.972504152057575 NM_001005404.3 YPEL2 Homo sapiens yippee-like 2 (Drosophila) (YPEL2), mRNA. 0.0 2049 79.16 0.437534600479793 TCONS_00092178_1 sp|Q2YDI3|YPEL2_BOVIN YPEL2_BOVIN Protein yippee-like 2; 3e-87 253 100.00 0.991596638655462 1 coding 0 0 1 0 -0.239843337505309 0.174795744915603 -0.0174549989696699 0.730666680915987 AGTGTTCAGCTGGCAGAGACATCATTACAACATGTAATCAGGATTTTAAGAGCTGAAGGAATCCTAGAGATCATGTAGGATTATCATCTGACAGATAATCCCCCTGAAATCAAGACTAGACCCTGTATCCAACATAGAGATGAATGGCTGCTGAGAACCAGCCCGAGACCTCTGCTTGAGGGTCCTTCCTCTGAAGACATCACCAGTGTGTGGAGCCTGCCGCACACCCACCCCCTGCCAAACCACGGCCTTTACCTGCGTCTTCCGGTGTTTCCCGTGCGACCCGTCCTGTGGGAGTGCCTCGTGGGCCACCCCAGAGTTCACCCCCGGCTCAGCAGCGCCAATGGTGAAGATGACCAGATCCAAGACTTTCCAGGCTTATCTGCCTTCTTGCCACCGCACCTACAGCTGCATTCACTGCAGAGCCCACTTGGCCAATCACGATGAACTTATTTCCAAGTCGTTCCAAGGAAGTCAAGGACGAGCATACCTCTTTAACTCAGTAGTTAACGTGGGCTGCGGGCCGGCAGAAGAGCGAGTGTTGCTCACAGGACTGCACGCCGTCGCAGACATTTACTGTGAAAACTGCAAAACCACCCTGGGCTGGAAATATGAACACGCCTTTGAAAGCAGCCAGAAATATAAAGAAGGCAAATACATCATTGAGCTAGCACACATGATCAAGGACAATGGCTGGGACTGATGGGAGAGCATCCAGCCAACCCAGCGTCCACGTGAATGCCATCCAACCGAACATTCTACCCAAGCGTGAGAGAGTGACTGAACACGTGGTTCCATCCATTTAGGGGCCTTGCCATCTGGGGCATTCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAACCGCTGTCTCTCTGTCTCTTTGCTTTGTATCTGTTTGTGAGTTGATCCTGGCTTCTCTCTCTGTTCTAGTGTTGGCTGAAAAAAACAAAACAACGAAAGGAACAGACGCCTGCCCGCATGGCGGCAGCCCACTTTGACGAAGGCCCCAGGGCCCTTGAAGAGCTGCCCGAAGGCCGCTGGGCAGGAGTACAGTGGCCCAGCCCGGGGGTGTGAGGGTCCCGGGTGGGCAGGGGACGGGAGGGGAGAGGTAGGAACAGACTTGTGCTGCTCCTGGAGACCTGGGAACTTAGGCTTGAAATAATCGACTTGTCTAAGAGGACAAAGAGGAAAAAAAAATACCTCATGACTGCATTCTCTCTGATCAGAAGCTTCTGTTCCTGCCACCAAATGTGCCAGATTAGCCAATGAGAACACAAGAAGGGTGGCCCCTCGTCTTCGCTGGCGGGGCAGGGGGCCGGCCTGGTTCTCCCGGGCCGAGCTGGTGGGGGTTGGGGGAGTGTGTCCTGGCAGCAGGGGATGACTTGGGAAAAGCCCAGAAGGTTTTGATGACTGACGCCTCACTGCTCCTCTGGGTGATCTCTGCCTCTTCAGCCACTGTAGGTGACAGGAGAGGGGACTGTCATTTGCAATGTGCGCGAGATGCAAATATCCCAAAGGCTTTGACCAGCAATCAAGTAAAAAAAGAATCAATGATTGAGGATAACAGGGAACACAGGGGAGGGAGGTGCAGTTGGGGAGCTCTTGCAGAAATGGCCTTGATCTTGGGCCAGAGAAAATAAAAAAGTAGAACCAGTTAGCAATTCCGACTGACCTTTTTTTCTGAACCTTCATAAGAGAAGAGCACTGTGGCAAGGAAGAGGGGGTGGGTGGGGCAGAGCCTGGAATAGTTTAGGTTTGAACTGTTACAGGTTAAGTGCATCTTTTTTTTTTTTTGGTATGCATTGGCTTCACTGAGAACAGCAGTTCTTTACGCGTATGAGTTTTTGGGTGTTTTCCTCCAGTTCTATCATTGTAGTTGCGGAAAACAAAGTCCCAAGCCTTCGAGTTTAGTGATGACCTGGCTGACAGATTCCTCATGCCCCTAGCTTCTTCTCTTTGTACTTGAATGTTTTTGTGTGGAGAGAAATCTGTCTGTGTGATCCAGCAACGGGAAAGTCTTCAATTTGATGTCAGACGGCAAGTTATAAATTCCAGTGTTACACCCCACCCCCGACCTCCCCATCCAAAGCTCATTATATTAGGGAAGTGGGGAACGCATCTCTGTGAGGCTCATGAGAGAAGAGTTTGTTGCATTTAATCAACACTGTGAAGTCTGTTCTCCAGCAATTTAGCCAGTACGCAGTGCATGACCGAAACTCATTTAACTGAGATAATTTCATTGCTTAGACTGAAAATATTATCATTGCTAAGATATGTGTAGGTTATGTTAGGTAATTCTCAGCATCTCATTCTCCCAGTAGGCTGATCCTATAGGAAAATTCACCTTAAAAGTCACAAAAGAGTGAGTTGAAGGAGACGAGAACCTGTAAAATTGTTAAGCAAGATTAAAGCAGCCAACCCGGGACGTTTTCAAAATGGAACCAGATTCCCAGAGAGGGTGAGTCTGTCATGGAAATGCCTTTTTGCGTCTCTGTGGGCTGCTGGTGGAGCACAGGGCCTGAGATGCTCATGGTCCTGCCCTGGCAGTCCTGGGTGGAGAGCTAACGGGAAGCCAGGTAGCCCTGCGTTTAGCAGCAGACAGCCTCCGTGAAACAAAGAGGGTTCTGCAAAAGCAAATTTTGTTCCCAAAAGCTTCTTGGCCCACGTCGTTTGGTGCTTTAGCAACCCTGGGAGATTAAGTTGTTCTCTCCACATTACTAAAAAGCAGACTGAGATTCAGAAGTCTTTCATTTCCAATCCCAGAGAAAACAGTTCCTCTGGCTCCCAGGCCCAAGATCTCGATTAAAAAAAAAAATCATTTTCAACTTTCACATTCCTAAGCTGGTTTGCCAGCCCAGAAATCATAAATTCCCCTCTGCATCCCTGCTGAAGGTAGTGGCTCTCATTTCTGTGTTTTGATTAGCCCCTTTACTCAGGGAATGTCCTGGCTATTGATAATCCTTTCCAGGAAAAGAAAACAGGCAGGGTCAGGGTGGGGGGAACATGTAGGTGTGTAAAAACCGAGCATGGTCATATAGGAATTGGATGTGAGGTGCCCTAGAGTGTTCAAGGGGCAGAGGAGACTGAAGTGCCACTGGTCGTCTTTGGGGATGGGGCCTCTAACTCTTGCATGGATCAGAGCAGGCTCCAGTTAGACCCGGGTTTTGGTGTTTTGTTTTGCTTTAATTTAAATTACTATCCATTGAGCATCCAGTGGGCACATGGTGCAAGAGAGCTGCACAAAATGCTGGTTTTTCCATAATGACAAGGGTAAGAAAGAACCAACTCATTAGGCTTTCCCTAAGAAGAACCGAAAGTGCTTCTTATAACGTGAGCTCCGTTCATGGCTTGTCTACTAATGTCTGGCAGTATCCGAGAGACCGCAGCTGAGTGAGGGAGATGCCTCAGTCGGCTCATTTTTTAATTTCCTCACCAAATTATGGACTCAGAGCATAACCAAAGACCTCATCCGTTCACCCCTGGTGGGTTTGGGGAACTGGAGTTCGATGGTAAGGCTTAGGTGGGGTGCCCGGAGTAGGGAAAGGGAGAAGGGGAAAGGAAAAAGGCATGACGTGCTAGACCTCAGCCAGCAGCTGTCTTCCTTTTCAGCTGAAGTCCAGCCGGCAGATTCTAGTTCCATCTCCCTCGTGCCTCCCCAGGTCATATGGCGTGGGCGGCCCTGGATTACACCCAGCCTGCTGGGATATTAGTCTCAGGCCACTGGTGGGTTGATTTGACGTGTATCCAATCCAGCCAAGCTCAGTGTCCACGGAACGTCAGCTGGGCCTGCCCAATTCCCCGGACAACAAGATGACGGAGATAGGATAGAGTCAATCTTTACTGGTGGATCAGTGTGTGAAAGACAGGTGTCCCCTTTATAAAAAGATTTTCAAGAGGATATATAAGAAACAGTTGCTTGTGAAATATACTTTTGTAAATAATATTTAATTTTTTAAATAATATATTTGGTGCTGTTTTCTCAGATCCCCTGAGAGCACTTTTTATTTTCATTTTTAAATTCTCTAGTTTCCTCTGCATTTCTTGAAGTATATTTTAAGGGAAACAGTGATCACCAGTATACTCTTGCAAAAGAAAAGGAAAGGAAAAAAAAAAAGATCTCCATCACTTTAGTTTGGACAGAGGCAATAAATGAAGCAATGTCTCTGTATTTCTTCCCAATGGAACAGACTCTGCAGTACATTCATTACCAGGTTGAGAATTGAAATATTTTCTTGTACCGCTATTGGCCAGAAAAGAAAATAAATCAAATAAATTTAGTAACAACTTAGAGCGATTCCTCTTGTTGGAAGAATTTCCAACAGATTGGAGTCTTGTTTTTAATTGTTTGTGTGTGTGTGTGTGCGCCCACGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAGCACTTTGCATCGTGCCTGCGGTTTTCGTTTTTTGGGGGGACACTATACCTACAGTTTACACCTTGGGCACATAAGATTTTTCTTCTCTTTCTTTCTGCTGGTTTTGTTTCCGAGTGGACCAGCAGCACAACCCTCGAGGAGTTTGTTTCCCCGAGCACGGAGCTGTTGCGAGTTTGCTCCTTCGTCTTTGTGTGCTCAGCTTTTACAGACTGTAAAGGAAATCTGTTGTTTGTGAAGACCCAGCAGTCACAGCTGTGTCCCTCACTGAGAGGTGAGGGAACTCATCATGGACCCGGGGCTCCAGTTGTTGTGGAAGCCACATCATGTTAAACATTAAACCGGTTTGGGTTGAAAAGAATGTCAATAAAATAATACACATATTTTGTAGGTAAATAGCTTTTTTTTTTTTTTAAGGTCACATTGCCTCAGGTTCAGGAAGAGGCTGGGAAATCAAATATTGAACACAATCAACTTAGATATTTTTTTAAAAAATGAGTCTGCCTCAAATGAGAAAACATGCTAGTGGTCTAGGTCGAGGAAAGAGATATATTAATATTTAATATTTAAAATTAAGATAACGTCATGAAATCAGCCAGCAGTGAAAGATAAAGCCAAGAAGAAACAAGCCGTTCTCATAGTATCAAATTCTACCTGCCCGTATGTTTTTGTATAACATTTGGGTGAAAGTGAGAGTCAGTTCCCTTTTCCAACCTGCAGAGACTATCTTTCAATACAGACTCTGCCTATTTATGCTTGTGTTTACAAACTGTATTTGTTGGGTTTTGTTTTTCTTTTATCTTTATTATTATTTTTTTTTTAGTGGCATTTTCAGGTCACTTTGCTTCAATAACAAAATTATTTTCAAGTAATTTGTCTTCACCATTTCCTGTATTTGTACATAGTGATTCAGTATTAGAGAAAAGTGCATTGTTTCTGTCATATTTCCAATCTGTGTTGGTGCTCATTTGAGAAAATAAAGTTTTCAAATATGAATTA EMBV3_12257 TTTCGACAAGAGTTCCCTGCCCAAGGCCACAGCCATCCCATTCTCTGCTTCCTTGAGACT Gene BVV0102_262252 - 1 EMBV3_25469 GK000005.2:57606868-57616540 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33895 GGCAGTGCACAAATGCTTGCTCTTTATATGCACAGTGACTTCATCCTGTGGAGCGTGAGC Gene BVT0102_041313 + 1 EMBV3_09145 GK000025.2:39046037-39050620 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147346 TCONS_00147345 TCONS_00147348 TCONS_00147354 TCONS_00147347 TCONS_00147352 TCONS_00147353 1 XLOC_089348 Coding TCONS_00147352 XLOC_089348 NonCoding Coding - 25:39046238-39050447 - TSS109963 4033 1 TCONS_00147352_8 106 0.314902058021324 2 0.0420627376425855 0 6.55678478073188e-266 0 0 1.99243467920018e-82 0 0 0 1.68551165657418e-19 7.50938650118448e-28 1.53627924195597e-08 5.0823361373386e-52 1.98357472890911e-19 0.000218919303652166 9.84205114872512e-05 0.000248230903503019 1.24021431638276e-05 0.00142129180032586 0 0 0 7.71322012167483e-05 0.000943458891884712 0.000243804915733649 0 6.10415609663291e-35 5.38303338926113e-115 1.29199948408572e-15 1.65236427782996e-18 0.000148594316487462 XM_005225076.1 ZNF12 PREDICTED: Bos taurus zinc finger protein 12 (ZNF12), transcript 0.0 3912 100.00 0.537565088023804 XR_242099.1 ZNF12 PREDICTED: Homo sapiens zinc finger protein 12 (ZNF12), transcript 1e-146 526 68.06 0.385569055293826 0 noncoding GTTGTATGTTCGGCTTGAATCATGTTTGAAAAGGCATTGTATCCTTATTAGAGTAATTTCTAAGGTATTTTAAGTAGCACCACTATGCTAGCATCTAAATATGTATAGATAATGAACTAATATTTGAAAGATATGAAGTATACTTCTCTTTGTGCTCTTCCCTAGCATTTATAAATGGATTTTATTGTTGTTAATGAATTAAGTCTTCCATAAGGAAACCAATGTTTTTAATAGTGTTTTAACTGTATCTGAATCAGCAAGAGATAAAAATCTGTGCATAAAGTAGAAAATTGCATAGATTATTTAAAATGGTTAATGCCACAAGTCTCTGTAGTAAGGGACAGCTGTAGGACTCATTGCAATCAGTACGGTTTAAAAAATGTACTTAAAATAGTCTCATTTTAATCTGTTTTTTTCACTTACTGTTTTTTATTTAGATGCCTTTGTAAGTGTGTAGAGCACATGTACTATGTAACCCAGAAATTAACTGTATTTTTATTTGATACGATGGTGTTTTTAAGCACCATGGTTTGTTCCTTCCTGAATGGATTGAGAGAGCAGGTTCGTATGGGTTGTAGCTAGTGTTGCTGAGTGACCAACCTAGTCACTCATTCCTTGTTTTTGGCTGCCCAAGTCTGGGTATCCATTCCTCTTGATGGAACAGGGGATAAATCCTGATTAGTTTCAACCAATAACGATAATCCCTTTCTCATAGCCAGTAATTGGTTTAGATTATTCGGAGGACCCCATGCTAGACAGGTAAAGAAAATATCTTGAGCAGGTTATTTCTGGAAAAGGTTTCTTCAGAGCTTCAAGGAATCATGCCAGGTGAAGTGGGATCCTGTTCAACGTTTCCTTATCTGGCTGTGTCTTTCAACGATGGTTATAATTTGTGCATGGCAGAGCAGAAAGACTGGAAGAACCTGGAACCTGGATGATGCTCTTGAGCTACTGAACCAGCCAGCCGTGTAGCCACTCTATCTCTGGACTGTTTCTTTTGTGAAAAACTGAATTGTAGATTGATTTAGGTTGCTTCTAGTGATAACTAAAGATATAGAGCAATTGAGAAGTGGGCTTTAGGCAAATCACTTTTTTTGAGGTGTTGATACAGAGATGATCTTATTTTCTGTAAATTTTGGTGTAAATATTACTCAAATATTTGAGTATTAGAAAACTTGAAACAATTCAATGTGTATGTTTTCCTCTATTTTTACATTACTGACCTAAGAACTTTTGGAGCCTGATATGATGTTAGGTATATCTTTCTTTCCATAATGCATGACATAAATTTTGTTTAGGTTAATTTGTTATTCATGGGTCATTGCTACCGTGTTGTTGATGATATATGGCGTAAGGTAAGGACTCACTTCTGTTTCTTTTCCAGTGATTAGCCTGATAGCCTGTATCATTTGAGTCATCCACCCCTTTCTGCAGAGATGAGATGCTGTTTCTCACGTGTTTCTGTCACTCATGGCTCCTGTTTTTCTTGCTCATCACTTTTCCATCAGATTTGTCTAGATGATCTTGAGTCTGCTGTATAACAGGTACTAAGATTCTGGTACAGTGTATAGTTTTATGTAGGAACTATATATTCATAGTATACTTGTTGAAGGTTTCCCACACTAATGGGAAGTAGCTTAAGTATTCGGTATGCATTTTAAGTAAAATATTTGGAAAGGTTATAAATGATTTACCATGTTCTTTTTCTGTTACGAAGTGCCTGATACCAAAGGGCCCTATACATGTGTATGTGGCCCTCAACTGCCTCTTCAGTAATACGGTTGTAGAATTTCTCTATTGTTTCAGAGACACCAGTGTTTTCATACTATTACATCTCTGAAATAGTGTAACACAGTCTAATTTAACTGGTGTTTTTTCTTCCTTAGAGGTACTTAAAGTAATGGTTTGTCTTATATTTGATGGATGAAATGCAATATTTGAAAAGTTTTTAACTATTCCTGGCAAGACCTGCATTCACAAAAGAAGGCACCATGGGAGATGGCCCACTCACCCATCCAGCAGCAAGGAGTGAATGTGGAATTGTGGCAGAGCACAAATGCTTGCTCTTTATATGCACAGTGACTTCATCCTGTGGAGCGTGAGCAGATTAGGAACTCCCAGTGGATTCCAGGGGCTAAGCCAGGGGTTGACCCCTCCCAGCACGTACAGTGACTGGTAATGTTTCTATCCTGGTGACTGGTAATGTTTGTATCCTGCAGAAGTGTGTAAAATGATACTGACCTGGACATACCTTTTAAATTTAATGCTGTATCGTGCAGTAGTCCCTGTGTTTATAAACCCCTGAGAAGTTCTATACACAAGAGAATGTGTATACAGGGAGTTTCACCACAGCAAGATTTTGAGGTATCCTAGGTGACCATCACTAGAAGAGGTGGGTAAAAGGTGGATCATGCATTGGGGTGGTGTCTAGCAGTCAGAGTGTGTGTTGTACTTGCATGTAGCACATCCAATTAGCAGTTTTAGATATGAATGGAAAAAATGGATGGAATGAGATGTCATACAAGTAAACAATGCTTATATCAGTTAAAGTTACACACAAACCCTTACAGAAGTTACAATGGTGAGTGCTAAAGGTCCTACCTTTATCAGTGAGTGCCTGTGAGGGAAGGGATGGAACTGGGGTTTGGCATGAAGAAAGAATGGGGTCTACACAGAAACCAACACTGATATGTTTTGAGCTGAGTAGTACAGTTAACATTGTGCCCAGGACTTCTCCAGAAATACTGAAGACATACACACAGGAAAATTAAAGACCCACACTTAAAATCCTCAATAATGTTTTATTCTGTTCAGTTTTAGCCAGAATTTTATGGCTCAGTTGCCTAAATGATACCTGTGCCTTTTCTGGCAGAGCTGCTCAGCCAACATCCCCCCACACCTCAGGTCAGCAGCCAGTGGGTGACAACTGGTGCTCCAGGTACAGGCTTCTGGGGCAGGCAAGAATCAGACTTCATTCCCATAGGACTGGGCTGTGCATCTCACCTATTGGCCACTGTCTGTAAGAAGGGAGCAGGGCTTACCTTTGTTGTCTCCTGGGCTCAGAGCAGTCTTCCCAGAGGGCTGGTGCCAAAGGCATTTAAAGGCACAAGTACTGGGTGCAGCAACCTGGGGCAGGATAACAGTCAAGGTGAGCAGCAGACATACTGAGAAGCCGGGGAAGGAAGAGGTTGGGAAGCTGACGTGTGTGGGGATAAGAGCTTTTAAAAGCTTCCATGTGCACACTGTATGTGTGCAGGGTGGGACATGACTCAGAAAAGATGTGGAAAGTCCCTATGCACTCACCTAGCAACTCTGTAAGCTGGAAGTGAAGACTAAGGCAGAGTGGAACCAGCCTGGTCAAGCACTAAAGACATACCCAACACAGAGCCAGCCTGCAAAACTAGGGGAGTGCCGTCACATTGCCTCATGTTTGACTCACATTTGACCTCTGACACATTCCCATTGATTAGTGCTTCCTTCGTTTTTGACCAAGGAGGCCCAGGCTCACCTTGTACACACTGGGTGTGACCTAGACTCAGCTCTTTCTCCAAGGAGTCCTGGTTCTTCGTAGGGGCCAATGTTGGGAACTGACTTTGCTCACCACTCTGGGAGGTGTTACTCAGTGGACAAAGCTATGAAATAAGTAATTTTTTAAATGAATAATATTTTTTGATTCATATTTATCATCATAGGGAGGTCACATGAATTCTTTGATTTCTATGGTTGTCTTATCTCTTAAACTGGAAGTTTTGATTCCTAGTAACTTTTATAATTTCTTTTAGCTTTCTCCTACAATGTACACAAAATAGATTCAAATAAACAGCAATATTATCAGGAAGAAAACTGATGAGTGATTTTATAATTTTTGGCTGTCATTTTTGTTCTCAAACATGTTCCATTAAGGATGTATAATCATAACATAGAGTGCAGAGTTTCTTCAAAGAATCACTTCTTTTGTGTGGTCAAGTTGCCAATTTGATACTAAGTTGATTTCAATTTTAGAATCTTTTTACTTTTGAATATGTAAACCACT TCONS_00145563 r 3' 77 TCONS_00147356 s 3' 174 EMBV3_10893 TCCAGCATGGGTTCTCCCGTCAATGCGCAGTTGTCCCCAGAAGAAGAAGAGAAAAGGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01136 TGTGGACCTTGGTTAGTGAGCAGACACGAGTAAATGCTGCCAAGAACAAGACAGGAGCTG Gene GeneID:404190|RPL27A:NM_001024471:57_cdna Constitutive 0 NULL GeneID:404190 15 GENE RPL27A NULL ribosomal protein L27a EMBV3_00542 ACCTCCTGCCCCTCCAGACGGCTTTTATTACCTCATACGCAGCTCATCTTAAACCAATAG Gene GeneID:100139739|PBX2:XM_002697326:243_cdna Constitutive 0 NULL GeneID:100139739 23 GENE PBX2 NULL pre-B-cell leukemia transcription factor 2 EMBV3_30136 GCTACCTCTCAGTCATTGTGAAGATTCTTCAGGTCTTGGCAATAACACTACCTCATAAGG Gene BVV0102_045504 + 0 NULL GK000005.2:45768733-45830157 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22630 TCCATAGTCCAAAACAGAAAGCTGTTAGAACACTGCATCGGCTTGATGGTGAGAGGGTCC Gene GeneID:518833|CYFIP2:XM_002689340:37_cdna Constitutive 0 NULL GeneID:518833 7 GENE CYFIP2 NULL cytoplasmic FMR1 interacting protein 2 EMBV3_23130 ATCATTGCGCCCAGTCTCACCATCTTTGTCTCTTATGGTCTCATCTTTTCCAGCATCCTC Gene GeneID:100300342|LOC100300342:XM_002699145:112_cdna Constitutive 0 NULL GeneID:100300342 29 GENE LOC100300342 NULL similar to olfactory receptor 160 EMBV3_35934 TTAGTGTCCTGAAGCGAGAAGCGGGGAACCTGACAAAGGCCACAGCCTCAGAGCAGAAGA Gene GeneID:507840|SSNA1:NM_001015539:65_cdna Constitutive 1 NULL GeneID:507840 11 GENE SSNA1 MGC134401 N14 NA14 Sjogren syndrome nuclear autoantigen 1 EMBV3_34370 CTTACCAAATAGGGACACAAGTGAGCAAATACTGTTGGAAAAGTAGTGCCACAAACCTTC Gene BVT0102_111123 - 1 EMBV3_32751 GK000009.2:78073398-78159327 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17340 AGTTTGCCTTCCTCATCCCCAATGGGGCCTTCGCTCACAGCGGCCCAGTCATCCCAGTCT Gene GeneID:539547|HES1:NM_001034678:111_cdna Constitutive 0 NULL GeneID:539547 1 GENE HES1 MGC129109 hairy and enhancer of split 1, (Drosophila) EMBV3_18832 ACACGGATGTCTTCGTGTCCACGCCTGTGCTGGACCGCTACCGCATGACCAAGATGCACT Gene GeneID:539499|SHISA6:XM_002695848:297_cdna Constitutive 0 NULL GeneID:539499 19 GENE SHISA6 NULL shisa homolog 6 (Xenopus laevis) EMBV3_33813 CCCAGTTCTTCTCTCCAGATTTGAATACTGACTCAGGAAAAGTCCCATATAATCCAAGGG Gene BVT0102_331528 + 1 EMBV3_28580 GK000008.2:29504030-29522479 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224806 TCONS_00224811 TCONS_00224809 TCONS_00224805 TCONS_00224807 TCONS_00224804 TCONS_00224810 TCONS_00224814 TCONS_00224808 1 XLOC_137639 Coding TCONS_00224806 XLOC_137639 Coding Coding FREM1 8:29300061-29506995 j TSS168499 11403 1 TCONS_00224806_15 1347 0.00666491274226081 36 0.945069176979989 6.41374087181126e-07 0.000501457554979977 0.000349034417373295 0.00020074632062736 0.000391753469081085 0.000287159101371648 0.000432080203646317 0.000629379780541586 0.000938264201628392 6.10026228167413e-05 7.98480133053912e-06 2.66532931424848e-26 7.32933568867158e-05 0.000150896480610501 1.84511160107752e-05 3.86154807867801e-37 1.82889541267962e-24 9.16651894623782e-43 0.000370434563720434 0.000351455816120266 5.97467458920236e-05 2.40406913899107e-05 4.21112529707476e-42 2.56033768505552e-18 0.000782387610991236 1.28759838774617e-08 0.000262660201247935 3.16306560819006e-13 5.00389309156467e-09 5.89263601342215e-09 XM_005209921.1 FREM1 PREDICTED: Bos taurus FRAS1 related extracellular matrix 1 (FREM1), 0.0 9097 100.00 0.442252038937122 XM_005251382.1 FREM1 PREDICTED: Homo sapiens FRAS1 related extracellular matrix 1 (FREM1), transcript variant X1, mRNA. 0.0 5021 86.23 0.372884328685434 TCONS_00224806_15 sp|Q5H8C1|FREM1_HUMAN FREM1_HUMAN FRAS1-related extracellular matrix protein 1; 0.0 2306 84.50 0.985894580549369 0 coding 1 0 1 1 -0.0511723400364681 0.698515805073813 -0.0110705220533555 0.912110227756853 CTGAAAATTTGTCATTATTTTATAGGTGGATTTGAAAAAAATCCTATATATTTTAGTGTTTTCTTCCTTCTGTCTATTTCTCTGATAATTGTTGTTGGACATCTCTCTGGGTTTTCTATTTTTTAATTTTCCCCTTTTACAATTCACTTTGAGTATGTTTCTCTTGAGCTGAAATCCGCAGAACCTGGAGACAGGTGAGCTGACGTTAGTTTAGCCTTTTATTAAGGCTAAACTAGGAACTGGGAAGCAGAGCTCATTTCCCCAGCCTCCACCAAGAATGGAAAGGGCTCCTGAGGGCAGGTGGAAGCTATTTTCCACCAGAAGACTCAAGGTCACTGGGATTTCTCCTTACCCTCTGAACCCAGGGCCTCACGACCCCAAACATCGGGTTCAATTTTAAGAGGATATGAGGTTTCTGGAAGGCTGAATAGGTAATCCTTGGTCCTTTGACATCTGTGTAACCTTTGATGTTTGTGTAACTAAAGGCTTGGCCTTCAGTGAATTTTCTCATTGCTTAAACCTCTGGATGCTTATAAAGTGAGTGTTTGTGTGTATATATATGTTTTTATGATAGCAGTATTATACTTGCAAATTTTGAAAATTGAGTATCTTCATGGGTACAAAGGAAGGAACCCAGAATGGTGGTAGGTGAGCATTGCCACAGTCGAACTCCCTTCCTAAACTTGGTCACCTTTGAGAAGCCAAAGTTGGCTCTCAATAAGAGTTGAAGCAAAGGCCTTTGTTTTACTCTAAGCCCATTCCAGAAATTCCCTAAACATTCCCCCCAATACTCTGCATATGGAAAAAAACAAGGTGGGTTGGGAATAAATACTGCTGGTTAGGAGAAACAGAGACCATCCTCTTCCTCATGAGGATGTGGTCATGTGAGAACTAATTCATTTTCTCTAACTGCATTTCTTTGAAGAATCTTTTGCTAGAGGTAGGGGTTGGAGGAGAATTTGCTAGTTCACCCAAGAGACGGAGTCTGGGGCTCTGGTGAACATGGCATTTGGCCTGGGCAGCCCTGGTTTAGGCTGTCGAGGCTTAGCTAGGGACACAGACTCCAGGGGAGCATGGAACAGGGTTGCTTCAAACATAGATGGTCATTCTGTGTGGTCTCTGTGACCAGCATTATCATGCTTGGAGCATTTAGACCCTTAGGCTGCAGGATGTGGTCCTCAGCCCTACCTTTGCTCCAAGAAGAAAGGAGTCCTGTCATTGCAGCAACTGGCATATTTGGCTCTGCTGGATCCTCCAGTTCACTCAAGGAGGAACTCTCTTTCCTTGAGTTAGTTTTACACCCAAGTGCCACTTTCTTCCTTAGAATGTGACCATAGATGGATGTTACCTTGGCCCATAGAAGCAACTCTAATATCTGGTAGGCCTGGGCTGGGCACAGAGGTGGCCATTGTTAAATTTTTGAGCTGTAGCTCTTCGTGTCCCTTCTCTTTCTTCCAAGGATGAAACCTCAAACAAATGCCTCCTGCTATTTTAAAATTTATTCTTTGATGGAAACTCTGGAGGATCTGACTGTCAGGTCGTGCTTTCCTTCCTACAAGTCTCTCCTTGAAGCTTTCCTTCCTACATGTCTCTCCTTGAAGGGCTCTATTTTTTAAGAACAGACTCTAGAAACTGATGTTGTCAGCCATGGTAGCCCTGGGACCTCATGGAAAGAAGAGATGAAAGACAACCCTGTAACAGCTGGAGATTGAATAGTAGAAACTTACCTTTTGAAGCTCCACTTCGTTCTTCCCGCCTCTGCATTGATGCCAAAAAACAAAATGAAAAACTGCGACCCAGTATTCAGTCTTCTCTTTGTAAGATTAAAAAAGCACTTGGGAGGTATACATTAATCTTGCTGGCGTTGTCAGAAGTGATCAGCGAGTTTTATTAAAAGCTCTGGGACTGCCTGAAAGACCTCCTTGTCTGAGTTTGAAATGAAAGGGACATGTTAAGATCTTGGGGCACGTTGTCAGGACCCTTCTCCCTGCCCCTTGGACTATGAGCTGACACCCCTGGAGGAAGCTGAGAAGCCCTCCTTTGTTGAAGGGATTTCCCTGGTGAACGGAAACGACTTGGCCCCTGTTGGCATGAGCTCTCCAAGCTGGGGTGGGCTTGGTGCCCTGCTCCTGCTGCTGCTGCTCCCAGGCTGGGCCAGCCCCACCTTTGTCCGTGTTAACCAAGGGGTCAGGGTGATGAAGGGCAGTTCCGCCTTCCTGTCTCAAGATGACCTGAAGTTCACCATCCCCAAAGAGAAAGATGCCTGCAAAGTGGAAGTCGTGATGAATGAGCCAATAACCCAGAGGGTTGGGAAACTCACTCCACAGGTCTTTGACTGCCATTTCCTTCCCAATGAAGTAAAATATACTCATAACGGTTGCCCAATTCTTGATGAAGACACAGTGAAACTTAGACTTTACAGGTTTACTGAGACAGACACCTTCACGGAAACCTTTATCCTGCGGGTCTACCTCCTGGAACCAGACTGTAACATCATCCGCATGAGTGATAATGCACTGGAGGTGTCTGAGTTCTATGGCCTGTCCCGAGTCATTGATAAGAACCTGCTTAGATTTGATTATGAGAGGATGGCCAGCCTGGAATGCACAGTCAGACTGGACCCTGTGGGAACTCACCTGCCAGCCCACGGCCAGTTGGTTCTGGTGGAGCCCCAGCTGGAAGAACCTCGCGGAGATCAGCCACATAGTTTCTTCCCTGAGTCTCAATTGGGAACAGAGCTGAAGTGTCCAGGCGGCAGGTGTACCCTGGGACTGAAGAAAGTCGGAAGTCTCAAAGTGAGCTGTGAGGAGTTCCTGCTGATGGGGCTTCGATACCAGCACCTGGGTTCCCCTTCTCCCAACATTGATTACTTCTCCATCCAACTGGACCTCACAGATAGCAGGAGTAAAATCTCATACAAGTCAGAGAGTGCGTGGTTGCCTGTCTATATCAGACCTGGAATTCCCAATCAGATTCCAAGAGCTGCATTTATGGCCATGTTTATTCTGGAAGTGGATCAGTTCATCCTGACCTCATTGACCACATCGGTTCTGGACTGTGAAGAGGATGAGACCCCCAAACCCTTGCTGGTGTTCAACATTACTAAAGCCCCACTCCAGGGCTATGTGACTCACCTGTGGGATCACACCAGACCAGTGTCCTCCTTCACCTGGAAGGATCTAAGGGATATGCAGATTGCCTATCAGCCACCAAACAGCAGCCATTCTGAGAGGAGACTTTATGAGGTGGAGTTGGAGGTCTATGACTTCTTCTTTGAGAAGAGTGCACCTATTACAGTCCACATTTCCATCAGAACAACAGATACAAATGCCCCGCGAGTGTCCTGGAACACAGGTCTGAATCTCCTGGAGGGACAGTCTAGGGCCATCACATGGGAACAGTTTCAGATTGTGGACAATGATGACATTCATGCTGTCCAGGTAGTCACTGTGGATGGCCTGCAGCATGGACGGCTTACTGTGAGAGGGGGGAAGGGGTTTCTCTTCACCGTGGCTGACCTTCAGGCTGGAGTCGTTCGATATCATCATGATGACAGTGACTCCACCAAAGACTTTGTGGTCTTCAGGATATTTGACAGCCAGCACAGCATCCAACATAAGTTTCCCATCAACATCTTGCCCAAAGATGACAGTCCGCCATTTCTCATAACAAATGTTGTGATTGAACTGGAGGAGGGGCAGACCATACTAATCCAGGGTTCCATGCTGAGAGCTTCAGACATGGACTCCAGTGATGACTACATCTTCTTTAATATCACGAAACCCCCACAAGCTGGAGAGATCATGAAGAAACCAGCACCAGGACTGATAGGCTATCCAGTCCCTGGCTTCATTCAGAGGGATCTATTCAATGGTATTATTTACTATCGTCACTTTGGTGGAGAAATCTTTGAAGATTCATTTGAATTTGTCCTGTGGGACAGCCACGAACCTCCAAATCTCTCAGTGCCACAGGTGGTGACAATCCATGTCACTCCAGTAAATGACCAGCTTCCAAAAGAGGCTCCTGGAGTTTCTCGGCATTTAGTTGTCAAGGAAACGGAGGTGGCCTACATCACTAAGAAACATCTACATTTTATAGATACAGAATCACAAGACAGGGAGCTGCTCTATACAATAACCACTCCTCCATTTTTCTCCTCCAGCCGCAGACACTTAGATGCTGGGAAATTGTTCATGGTGGACAGCATACCAAGGCTAACCAAGACTCCTGCAGCTCCAGGGTTAAAGTATTTCACGCAGCACGCTGTGAACCATATGAAAGTGGCCTACATGCCACCCATGCAAGATGTAGGTCCGCATCCAAGACACGTCCAGTTTGCCTTTTCCGTCAGTAACCAGCACGGTGGGACGCTGTATGGGATCTGCTTTAACATCACGATTCTTCCGGTGGACAATCAGGCCCCAAAGGTGTTTACCAAACCTCTGAGAGTGGCTGAGGGAGGTCAATGTGTCATCAGCACACAGCATGTCCTGGTTTCTGATGAGGACACCAAACTGGACAACATCTACCTCTCCTTGCAGAGTCCACCTCAGCATGGAATGGTGGAGCTAAATGGATTCCCTCTAAACAAAGGGACCACGTTTCCTTGGGGAGTCCTCCAGGCCTTAAAACTTAGATATCAGCATGATGGATCCGAGGAACTTCAGGATGACATAGTACTGCAGGTCACAGATGGCACAAACACAGCTGAATATGTCCTACACGTTGAGGTGTTCCCTGTAAATGACGAGCCACCAGTGCTAAAGGCGGACCTCATTCCCATGATGCATTGCTCCGAGGGGGAAGAGGTTGTCATCACTTCTGAATACATTTTTGCTACTGATGTGGACAGTGATGATTTAAAGCTGATATTCATGATTGTTGGAGAACCTCAGCATGGGACCGTAAGGAGAGCTGGGGTCACAGTACATCAGTTCTCTCAGGAAGATGTTGTCGCAGGGGCTGTGACGTACAAGCACACAGGTGGTGAGATTGGCCTGATGCCTTGTTTCGACACCATTACATTGGTGGTTTCGGACAGAGAAGCTGGTCCTTTTGTGAATGGCTGCTGTTACAATGGACCTCATCCATCTGTTCCTCTTCATGAGTCTTTTCCAATGTATGATCTCAACATCACAGTGTATCCAGTGGATAACCAACCACCTTCAGTTGCCATAGGTACCACATTCGTTGTAGATGAGGGCTTCTCAGCAGCCCTTACTGTTAACCATCTGTCTGCCACTGATCCTGACACTGCAGCAGATGACTTGGAATTTGTTTTGGTTTCTCCTCCCCAGTTTGGCTACCTTGAAAACACACTCCCTTCTGCAGGTTTTGAAAAGAGCAATATGGGCATCAGCATAGCTTCGTTTCAGTGGAAAGACATGAAGGCTTTACATATTAACTATGTGCAGTCCAGGCATCTGGGGATGGAACCAACGGCTGACAAGTTTGTGTTGTATGTCACTGATGGGAAGCGACGCTCCATGGAGATACCATTTTACATTATAATCAACGCTACAAATGATGAAGCTCCTGATTTTATAGTGCAGAATATTACTGTGTGTGAGGGTCAGATGAGAGAGCTGGATTCTTCCATCATCAGTGCTACTGACCGGGACATTCCCAAGAACCCCTTGCTGTTCAGTATCACCCACAAACCGCGTCATGGCCTCCTCATCAACAGGGCATTTAGCAGAAACTTTTTTCAATATAAGCAACTAGCCAACCCTGGCCAGAAGCATGAACTTGTCTACAACTTTTCCATGGAACTTCTCAAGAATGGAATGAGGTTGGTGTATGTGCATGATGATTCAGAGAGTCTTGCTGATGACTTTACAATCCAGGTGTCAGATGGGAAACATAAGATACTTAAAACCATTTTTGTAGAGGTCACCCCAGTTAATGATGAGAAACCAATGCTGAGCAAGAAGGCTGAAATTACAATAAATATGGGCGAAACTCGTATTATTTCTAGTGCTGTTCTCTCAGCCATAGATGAAGACTCACCCAGGGAGAAGATTTACTATATATTTGAAAGAATTCCCCAAAATGGGCAACTTCAACTTAAGGTGATATTGTCATCCTGGCAAAACCACTTGTGGTGTCTAAAGGTGACAGAGGTTTCCTGACGACCACCACTCTCCTTGCTGTGGATGGAACAGACAAGCCCGAGGAACTTCTCTACGTCATCACCTCCCCGCCGCAATTTGGCCAGGTTGAGTACGTCCGCTATCCTGGGGTCCCCATTACAAGCTTCAGCCAAATGGATATAGCAGGACAGACAGTCTGCTATGTAGATAAGAGCACGACAGCTGTCCACAGAGACACGTTCAGATTCATCGTCAGCAATGGACTTCAGACCAAGCCTGGGGTTTTTGAGATCACACTGGAGACTGTGGACACAGCCTTACCCGTGGTGACCAGGAACAAGGGGTTGAGACTGGTTGAAGGGGCCACGGGCCTGCTCTCCCCTGACCTCCTGCAGTTGACTGACCCTGACACTCCAGCCGAGAAGCTCACCTTTCTTCTGGCCCAGCTCCCACGGCATGGCCAGCTCTACCTGCGGGGGATGGCGCTGATCCCACACAATTTCACTCAGCTGGACGTGGACAGTGGGCATGTGGCCTATCGGCACTTGGGAGGGGATTCTTGGACTGACCACTTCACTTTTGTGGCCACGGATGGGACGAACCATGGCTTTCTTGTGGATGGGAGAGTGTGGCAAGAACCTGTATCATTCACCATCCAGGTGGACCAGTTGGACAAAGCGGCCCCCCGTGTCACACACTTGCATTCCCCTTCTCAAGTAGGGCTCTTGAAAAATGGTTGTTATGGGATTTACATCACCTCCCGTGTGTTGAAGGCATCAGACCCCGACACTGATGATAATCAGATCATCTTTAAGATTTTACGAGGCCCCCAACATGGGCATCTGGAGAACTCAACGACAGGTGAATTTATCCATGAGAAATTTAGCCAGAAGGATTTAAACAGTAAGACCGTTCTTTACATCATAAACCCATCTTTGGAAGTAAATTCAGATACCATGGAATTTCAAGTCATGGATCCCACAGGGAACTCTGCCACTCCTCAAAGTTTGGAACTGAATTGGTCTTATATTGAGTGGTCGCGGACTGAATATGAGGTCTGTGAGAATATGGGCATGCTACCCTTGGAGATTACCAGAAGGGGATATTCCATGGATTCAGCCTTTGTGACTGTACAGGTCAACCAAGTGTCAGCTACAGTTGGAAAGGATTTCACCATGACTCCATCTAAGCTGGTGCAGTTTGACCCAGGAATGTCAACTAAGATGTGGAATATAGCAATTACCTATGACGGATTAGAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCCGTGAATGCGGTTCTTGGCACAAAGACAAAAACTGCAGTGAAAATTTTGGACTCAAAAGGAGGGCAGTGCCATCCTTCAAATGCCTTCAATTCAAACATGCCCAGTGCATGGGAGAAGGGCATTTGGCACCTGCTCTCCCCAGGGGCTTCCTCACCCACCACTTCTGATTCCTTTCATCTGGAAAGAAGACCCCTTCCAACTTCCAAGCAGCTAGCGGTCACCAGGGGTGACGCCCTGCGGGACTTTGGTTCTGAAGATCTTTCTCCAGTGAAGCTTAGGACCCGAGGGGATGGCAAAACAGTTCCTCCATCCTCTGTTTATAAAAATAGAACAGACATCATCTATAACTATCATGGGGTGATTTCCCTGAAACTGGAAGATGACGGCTCCCCAGCTCGCAGAAGGAAGGCCAATGTATCCTTTATTAGTGAGCCCCAAAAGACAACCAAAGTGGCAGAACCGCCTCAAGCCGATAAGGAGGAATCCACAACCGGCTCACACTTCCCCAGACAGGACCCGTTGCCCTCATTCCCAAAGAACTGCACACCGGAATTAAAGGGACTCTTCCACTTTGAAGAAAGCCTCCAAAAACTGTACAAGTGCGATGGAATTGCCTGGAGATCCTGGAGCCCCCACACCAAGGAGGTGGAAGATAAATCCTGCCCAGCTGGGTGGCACCATCATTCAGGCTACTGCCACTCCTTGATCACAGAGCAGAAAGGCACGTGGACTACAGCTGCCCAAGCTTGCAGGGAACATTACCAAGGCAGCCTTGTAACTGTCATCTCCAGGCAGCACATGAGATGGCTTTGGGACATCAGTGGAAGAAAGCCGTTTTGGATAGGTTTGAATGACCAAGTGCGTGCTGGCCACTGGGAGTGGATTGGCGGTGAACCTGTGACCTTCACCAACTGGAGGAGAGGGCCCCCGCAACGTTCAAGGCATGGCAAGGACTGTGTTTTGGTTCAAAGGCCAGGAAAATGGCACACAAAGGACTGTAGGAAGGGAAAATCTCACAGTTATGTGTGCTCCAGGAAACTCTAACTGGCCCTACAAGTATCCACTTGGGATGTTTTTATCTATTTATTTCCAGGATTTGTGCATAGTACTCAATAGAAAACAGAGTGTCACGACTGATGAAGTACATTTCTTCTATCAAAGTGTTTGAAGGATTCTATCTAGTAAAGAAAAACAATAGTTCCAGGAAGATTGATAAATGAATGTTTCTTAGAGGAAAAGTTAAATTTTTTGCATCTCAGTACATTTTGAAATAAATCCTCAAGGTATTATGTGGTATAAATTTGGTTATTCTGGAGACTTCATATTTCAGTCAACAGTAATTTCATGGTCCTTGGATTTTTTTTCCCCAATACTTCAAATGAACACATTCTGAAATCTATATTGCAGGTGCTTCCACCACTTCCATCTGAGTGAGGCTTACCCTGCCAGTTCATTAAATCAAGGTTGAACTGCAAAGGGTTGCTTTGTCCCTTTGGAGTCCTTTCAAATGTGAAAGCTGAGAGGCTGTGGATAAAAAGGAGAATTCTCTGTGGTGAAAAAGGAAGGCTTTAGATGGAAGAATCTGGCAGATGGAAGTTCATCTGCAAAGCTGTAGTTCAGGTAAGAATTCAGGGGTTACCTGTCCTTCAGAAGTCTATCCATCACTTCCCACGAGACAGAGCTCCTTTTCCAGTAAGATGGTTGTGCCATTCTAAAGCGAATAATTGGGTTTCCCCAGCTTTACAGATTCAGGAGACATTTGAAGCAACATGAGCCTCTGTTCATCCGTGCTTGTAGCACTGAGTAGCATTTCTCAAGGACATTTGGAATAAAAAGCATATATGGATGATGGTTAACATATGGAAGAAAAATATGGCTTCCTCAAAAGTGTCCCAATGAACTTTGCAGATGAATAAAGAAAAATAGTACTAAAAACAGAGTCCTTGAAAGCCTATATTCTCAGAAAGGATTTTGATATAATTTTGAGTCCTTAAATATTTAATATGTGTAGAATTGCCATGTTAACCTGATCCTCTAATGAAAAGGTACCTTATTAATTTATAATGGCAGCTGAATGAAACATTTTTGTAGCAGTAAAGCATGTTGCAGCCTTACAAGAACTCCCTTCTGAAATCAAAACTTAATTACAGGAAATTAGAAATTTATTTCTGAAACATTTACTCACAATTTTCCTCTTTTCATAATCCCTGAAAAATATGGTTGTGTCCCATGTAACTTGCTATTATGAGTACCAGAGTCACTTCAGAATCAAAACAGAGCTACCAAGCAGATCGAAGTTTTGGTGTGTATTTTATTATAATAATACCTTGAGAGAAACTAAAAGTGACTAAAGAAATTCAGTCTCATTTTTTGGATATAAAAAACAAGCGTGTTTTATTTGTACTTGTTTATCAAGATTTTGGTTAAAATAAACATTTACAAAGACAGATTGGAATGAGATTTAGACATTCTACTTCTTATAAAATTCCAACATCAGTGTGGAGTCAGGAGGCTCCTTACCTTAGGTATCACAAGTAGAATCTGAATTGCTCTGATATAGAGGTCTTCCATATGACACAAGCAGTTTCTGGTGTTGAATCAGAAGGTGTAAACCCATTTTCTGTATTAGTTGATGGCCCTTCTGATCCATGGGCCTCTGCAATGTTGAAAGATGGGATGCTGAATAAAGAAATAAGGAGTTGTTTACCTGAAGGATTGTGTCCTAGGACGCAAAGTAAATGGTCAAGGAATGAGGAATTCCTAGATCTGTATTGACTGGAAATCCAGAACCATGGCAACTGTGTAAACCTAGTCAGCGTGGTAGGTTTTATTATACATTTCTGCCGTGTCAGTGATATTAAAATGTAATTGCAAATGTTAGCACAAAGAGAGAATGCTTTGATTTTTATAGCAACTGAAAGAAATACTAGAAGAATGTTTAAATCATTCCTGGTCATGAAAACATTAATCAAGTGGTAAAATCCAACTAACTGGAAGAAGGTACAAATAAAAATTCAAGCAAGTGTGGGTGCTAAGCAATATGTGGGTGCATGACCTTCATCTCCTTCTCATGACTGGGCTTTGACTGGTGGGGGAGTAGTAGTAAATGATCATCATGGTTCTCTCCACCTTGATTGATTATTGTCATCCTTTAGGTTACGGTGGGAGTGGGAAGGAAGGAAATGGAGTAATGGTAATGATAGAATGGGAAAGGGAGATGATAGATAAGGGCAGAGTGGAGAGAAGGATTGAGTAGGAAGAGATGGGAGTTGATAGGTAGCTAAGAAAGACAGAATCAGAAAGAAAGACTTGAATGTCACCCAGTTCTTCTCTCCAGATTTGAATACTGACTCAGGAAAAGTCCCATATAATCCAAGGGCATTAACCTAGCTCAATAATGTATAGCTCTTCAGAATCTTGTGACTGTTGGTCTTTAACAAAACATACATATATGTAGTATAAATCTGCTAAACATAAACTCAAAAACATATGACAATTATTCCATCTTCTTCCAAGGGGTGGTAAAAATGAACCAGGTGGTATTTATTTACATTTTTGGGGTTTATTTTTAAGACAGCCAAAAAGAATATGCACATATTTAACAGTATGGTTCTGTATAATTTAAACCATATACTAGTGCTGATTAATTTCTGTGACAAAGCAGCATATTAATTGTACTGTACCTACTGTTATACCAAAATTAATAAAATAAGCTATTTCTAGTTCTGAATTACTACTCCTTTAGTGTTTAACATTTTATATTTATTTTACCCATTGAAGAAGAAATGGAGAAAAAAACTGAACATGTATTTTTCATCCTTACTATTTGGATCAGCCTTTCATTTTATAGCTTCCATCCATTTATCCATCCATCCAGTCATCCATCCACCATCCATTCAACAAATATTGACTGTGAAGTGCCTGATACTGTTGTAGATACTGGATATATGTAGTGGATGAGATAGAAAGTATAAAATCATGGTATGTATATATAAATTTCTAATAGTTGT EMBV3_11126 CACCTCCAGATTGACAAGGTGACCGACAACAAGACAGGAGAGGTGGTGATCTCCGAAAAG Gene GeneID:540124|DKKL1:NM_001046469:361_cdna Constitutive 0 NULL GeneID:540124 18 GENE DKKL1 MGC134326 dickkopf-like 1 (soggy) EMBV3_35623 CTACAGTCCATAATGGAGCCACTGTACTGGCTTTTGGAAGGAGGAGATTCTGAAGATAGG Gene BVT0102_351955 + 0 NULL GK000018.2:23218336-23309539 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085743 TCONS_00085740 TCONS_00085742 1 XLOC_051946 NonCoding TCONS_00085742 XLOC_051946 NonCoding NonCoding - 18:23295477-23302266 - TSS63947 2209 3 TCONS_00085742_6 70 0.275237664101403 2 0.674867413081909 0.000234049930760398 0.000186503244195956 0.000284868106371275 4.5110859351468e-05 4.47006133642597e-06 7.61078937079539e-05 8.44792853388923e-05 0 2.37304708575037e-05 0.000534240984284997 0.000183220659166955 0.000103596177308102 0.000133787384288298 0.000223593991574139 0.000155470033089368 0.00013151973879664 0 0.000215811214761568 0.000399287302022303 0.00011068757606848 0.000379294726863009 0 2.49181796472526e-05 0.000159374085017513 0.000931532478211177 2.87050261956494e-05 0.000145881967812786 0.000134794226878816 0.000272508426149021 9.52596629436996e-05 XR_228454.1 LOC101907435 PREDICTED: Bos taurus uncharacterized LOC101907435 (LOC101907435), 0.0 3800 100.00 0.953372566772295 NR_034106.1 CRNDE Homo sapiens colorectal neoplasia differentially expressed (non-protein coding) (CRNDE), transcript variant 2, non-coding RNA. 9e-82 309 81.93 0.146672702580353 0 noncoding 1 0 1 1 -0.201800216132959 0.307059387081083 0.0495189749281961 0.394076203622177 TCAGGAATAAAATCAATTCAAGTATAGGTAATTAAATTGTAATTCAATGAAGGAAGGAAGTGGTAGGAAAGATGAAGCTAACTCTTGCTGTTTTTCTCTTTAAGAATCTACAGTCCATAATGGAGCCACTGTACTGGCTTTTGGAAGGAGGAGATTCTGAAGATAGGGAGATTCAGCAATCAGTCTTTGAAATTTCCTGTGGTCTGTTCAATCTAGATGCAAAGGACATGGAAAAATCAAGTGCTCAAGTGGTTTAAATATGTTTTGGATATTCTTATTTATAGATTACAGGATTTTTCCAATTAAAATCCGCAGTTGTCATGCAGAAGGAGGTTATGCCCTTCTTGATCACCAGTTTATTTGAAATGCTTAGCATTATAGTGTGTTACTGAATGCTGTTTTAATCAAAGTATAGAAAAATAAAAACAATTCTGTATGTTGACTTTTTTTCTAAAATGACTTTGTTGGACTGAATGAATGTTTATACCTGAAAAAGAGGGTTCCTCCCTGAGAAAAAAATCACTTTCTCCATTATAGCAATTCTTCTGGCAATCTGATATCATTAGAATAGGTTTAAAATCACTTTCTAATGTGACCCTATTATATTTATGGAAGAAGAAAGACTTAGAAGTTATCCATATATATAATTTTAATTCTCTATAGTAGTCCCTCTGGAATGGAACATTTTCTTTTTAAAAAATCTATTAGCTCAACTCAGGTATGAGGGAAAAATCATCTCAACTGGCAGAGCATTCGTTACGTCTTTGAGTATTTGGTTTATATAAAGGTTGACATCCAGTCTTCCACAGAGTTCTTACATTTGGGCAGACTGAATAATGAGGGGTTGCCTTGGCATTGGGAAATTCCTTGTTGTGGCCTTTGTGGTGGCTGAAGGGAAACGGAAGGATTCCTCCGTGGCAGGCAGGCGTCTGGCTTCTGTGGTATGAACTCTGTCAAGGGGTATGTGTGACCAGAGGTAGCCCTTAGTGAGGGGACTGGAGAGATGCACAGATGCTGCTGACACCCGAAGAAGTAGTGGCGAGTTACTGTTTTGGGCATGACCCAGTTTGTACTTCATCCACTTCTATAGTTCTCACAAAATGCTATGATAAATTCTTAAGCTCAGATCTCCGTACAGCAAAGTAAAATTTTTAGGCTAGAATATTTTTTATTTTTAATTAAACTTTATATTTTGAGATAATTACAGATTTCATGTGCAGTTTTACTAAATAATGGAGAGGTCCTCTGTACCTTTAGTAAGTTTCCCCTCAGTAGGGAAAGTATCACAACCTGGACATTGGCCTCATTACAGCCCAGATACAGAACTTCCATCCCCGGAAGGATTCCTCACTCTGTCCTTTTACAGTCGTACATGCTTCTCTCCTGCTCCTCTTCCTGTAGCATCACTAGGCTGTTCTCCTTTCCTGTAATGTTTTTTCTTTTCAAGGATGTTCTATAAATGGAATCATATAGTATATAACCTCTTGGGATTGACTTTTCTCACTCAGCACAATTTTCTGGAGCTTCAACTCACACGTATCAGTATTCTGTTCTTTTTATGGTTGGGTAATATCCCGTGGTGTGGTTGCCCCACAGTTTGTTTAACTGTTGTACCAGTTGAGACTTCAGTGTTGTTTCTGGTTTTTCACTATTATGAATAAAACTGCTGTAAACATGCATGTACAGATTTTTATGTGAACATAAGTTTTCATTTTCCTGGGATAAATGCCCAGGAGTGTGATTGTGGGTCATATGATAATTACATAGAGTCTTTTTAAGACTAGAATTGATTTTGTGTGTATGGAAGGGGAGACAAAGAGAACATCTACATTTTTGTGGTATTTTTGCTTTAACTGGATTTGTCTACGATTTCAAAACATACAGACTATTTTAAATAACTTGTAGCTAGATATAAAAAAAACATTTTTCCACAAACTAGATTTTGTTCTTATTTCTAGAGAAATACTTTTGAGAAAAAACTGACCTTTTTTGGGGGGGGTAAGCAATTTCTGTGTAAAGGAATAAAGGTAGACATACACTATAGAAAGTGCTGCAAAGCTGGCAGGGTACTTGGGGAAAATTTGCAAGTGTTAATAGAGACTTGACATTCAAGGCTATATTGTAATAGTTTTTCAATTTGTAGACTTTAACTTTTGTCACTACCATGTAGCCTGCAGATTTTATTTGTAGAATAAATTCATTATCTTTA TCONS_00082578 TCONS_00082579 r 5' 12024 TCONS_00082578 TCONS_00082579 r 5' 7274 EMBV3_36587 CTGAGTATGTTCAGGGTAATTTATGACATCTTGTGGTGGTGCCATGCCGTCCCCTTCTGG Gene GeneID:512883|PTPN4:XM_002685450:77_cdna Constitutive 0 NULL GeneID:512883 2 GENE PTPN4 NULL protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) EMBV3_32599 CGCCGCAACTTCAATTACCGACGCAGACGCCCAGAAAACCCTAAACCACAAGATGGCAAA Gene GeneID:287023|YBX1:NM_174815:32_cdna Constitutive 1 NULL GeneID:287023 3 GENE YBX1 MGC127824 NSEP1 YB1 Y box binding protein 1 EMBV3_11113 TGAGCGCTACTCTTCGCTCGAGACCAGCAGGATCAAATCTAAATCGCTGTGGTTTCCGAG Variant GeneID:509322|PGGT1B:NM_001015560:227_cdna 157^275 1 EMBV3_02700 GeneID:509322 10 GENE PGGT1B NULL protein geranylgeranyltransferase type I, beta subunit EMBV3_42509 GATGCTGAAAAAGGCAAAGAAGTGGCTGTTTCTTCAGTCTCCAAGAGGTATCAGGTCTGC Gene BVT0102_366943 + 0 NULL GK000008.2:34885481-35706190 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224936 TCONS_00224929 TCONS_00224930 TCONS_00224935 TCONS_00224931 TCONS_00224938 TCONS_00224928 TCONS_00224932 TCONS_00224934 TCONS_00224941 TCONS_00224940 TCONS_00224939 TCONS_00224933 TCONS_00224937 TCONS_00224942 1 XLOC_137660 NonCoding TCONS_00224930 XLOC_137660 NonCoding NonCoding - 8:34911819-34962431 - TSS168557 644 2 TCONS_00224930_2 61 0.12888198757764 3 0.987334769121337 0.000468622390474904 0.000972895599481725 0.000969411405027065 0.000622008781153669 0.00016826983169988 9.18150515108452e-05 0.000673147113907933 0.000337668386636903 0.000591572708239509 0 0 1.59241363577352e-14 5.30760168197712e-06 3.04099266006651e-26 8.46100286425059e-92 0 0 0 0.000359855550276374 7.23640245992841e-05 1.57150557699639e-05 0 0 0 0.000405168278585277 0.00110621049613024 0.00013038271781721 0 0 0 XR_235523.1 LOC101904827 PREDICTED: Bos taurus uncharacterized LOC101904827 (LOC101904827), 2e-46 190 97.35 0.173913043478261 XM_005251529.1 PTPRD PREDICTED: Homo sapiens protein tyrosine phosphatase, receptor type, D (PTPRD), transcript variant X1, mRNA. 4e-16 89.7 77.48 0.170807453416149 0 noncoding 0 0 1 1 0.0325611601441863 0.848942735887108 -0.0298691423506247 0.612382172417574 GATGGGAGGAAAGAAGCAGAAGGGAGGTGAAGCAATGAACAGGCCATGGGTCAAAGGATGCCCTCTGACTCTAGATGCTGAAAAAGGCAAAGAAGTGGCTGTTTCTTCAGTCTCCAAGAGGTATCAGGTCTGCTGACACCATGGCTTCGACACCCCATGACTGACTTTGGATTTCTAACCTCCAACTGTCAGGTGGGAGTAAAAAGCAAGCAGTTCCTGGCCCATAATACTCCAGTTTAGGATGTCTGACTGATGGCATGCTGGCACCAACCTTGGAGGAAGTGATGAGCTTCAGCTCCAGATTAATGTCAGATGCTGGAGATGACATGATTACGCTGAAAACTCAGAACTTGACAATGTCGTTCATTTGCGCAGTTGTGTCTGACACTTTGAGACCCCACAGGAGGAGGAAATGGCAAACTACCCCTGTATACTTGCCATGAGAACCTCATGAACTGTATAGAAGAACTTGGCGGTAGTAGATATTAAATGTAATTTATTTCTTGTAGAGGGGAAGATACAAATTCCTGTTTGATATGGCAATGTTCTTTTATCTTAATAAATTAGAGGAATTTTCTCTCATTTTTAGGTATCACTTAAGCAATTGTTGCCTTTCTGTAATAAATAAGCGAACTTCAACACTA TCONS_00224944 s 5' 1260800 TCONS_00224944 s 5' 1311411 EMBV3_39225 CCTTTGGCTGAAAAGGGCTGAGTTGTCAGCGATACGGGAAAGAAAACGGAGAAAAGGGTC Gene BVT0102_171423 + 0 NULL GK000005.2:103889125-103899876 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17675 CAGCTTCCTGAGGATGATGGGCTGGAGCAGGGTCTGGCCGCCATCCATCTCACAGTGCTA Variant GeneID:514938|ARFIP2:NM_001034477:34_cdna 255^351 1 EMBV3_06275 GeneID:514938 15 GENE ARFIP2 MGC126954 ADP-ribosylation factor interacting protein 2 EMBV3_17378 CTAGCTTTCCCAGCACCACTTATTGGGGAGGCTGTCTTCTCCATTGTATATTCTTGCCTC Gene BVT0102_385061 - 1 EMBV3_14948 GK000017.2:21940787-23530458 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36878 TGCTGCCACTGTTTTTGGAATATCTTATAAATGTCTTCTGTGTGCCCAGTCTCGAGATGG Gene BVV0101_048723 + 0 NULL GK000002.2:42764360-43381493 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02189 CAGGCAGACTGTTTTGGTTCATAAGCCACTGTCTGGGGCATTGGTAGTTAGCTGGCACCT Gene BVT0102_372469 + 0 NULL GK000001.2:144773112-144790329 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002451 TCONS_00002453 TCONS_00002454 1 XLOC_000611 Coding TCONS_00002454 XLOC_000611 Coding Coding PKNOX1 1:144753307-144775539 j TSS1257 4203 1 TCONS_00002454_1 424 10 0.811389501147047 0.00148151557082596 0.00194381827501696 0.00161208233145616 0.00195134668395219 0.0011537154897119 0.000392200854181559 0.00112397858991119 0.00201101927132959 0.00432670706285144 0.00029110805796524 9.49608214340969e-06 0.000135110992652527 0.000383838341368241 0.000132219362287238 0.000176592310925444 0.00130232254937932 2.80057486985516e-09 0.000122437160456239 0.00349449517210143 0.00355797952888368 0.00143837789700945 0.000727203051262869 0.000453668629268364 0.00115185924877255 0.00341881952229297 0.0037674828687073 0.0022423125986279 0.000166123711232324 2.63479192778986e-11 2.44290717835696e-08 NM_001046350.1 PKNOX1 Bos taurus PBX/knotted 1 homeobox 1 (PKNOX1), mRNA. 0.0 3119 100.00 0.411134903640257 NM_004571.3 PKNOX1 Homo sapiens PBX/knotted 1 homeobox 1 (PKNOX1), mRNA. 0.0 2432 83.10 0.562931239590769 TCONS_00002454_1 sp|Q2HJ84|PKNX1_BOVIN PKNX1_BOVIN Homeobox protein PKNOX1; 0.0 862 100.00 0.985849056603774 2 coding 0 0 1 0 -0.00259905378422853 0.987260625833471 0.00525197512095506 0.920178716987509 CCGTGCTTGTAATAGCTCCGCACCTCCCAGGATGTGGAAAACCGTTATGCAGGTAGTCACAGAGTTAAAAACGGAGCAAGACCCCAACTGCTCTGAACCAGATGTGGAAGGAGTGAGCCCTCCCCCAGTGGGGTCCCAGACGCCGATGGATGCAGACAAGCAGGCCATTTATAGGCATCCACTGTTTCCATTATTAGCTTTGTTGTTTGAAAAATGTGAACAGTCTACACAGGGCTCAGAAGGCACGACTTCTGCCAGTTTCGATGTGGACATTGAGAACTTTGTGAGGAAGCAGGAGAAGGAGGGAAAGCCCTTCTTCTGTGAAGATCCAGAAACTGACAATTTAATGGTAAAAGCCATCCAGGTTCTGCGTATTCATCTTCTTGAGCTGGAAAAGGTTAATGAACTCTGCAAAGATTTCTGCAGTCGCTATATTGCTTGTCTAAAAACGAAGATGAACAGCGAGACTCTCCTGAGTGGGGAACCCGGCAGCCCATACTCCCCCGTCCAGTCCCAGCAGATTCAAAGTGCCATCACAGGCACTCTTAGCCCCCAAGGAATCGTGGTGCCAGCATCCGCTTTGCAGCAGGGGAATGTCACCATGGCAACAGTGGCAGGGGGTACAGTCTATCAGCCTGTCACAGTTGTCACTCCCCAAGGCCAAGTGGTGACACAGGCATTGTCGCCTGGCACCATCCGGATCCAGAACTCCCAGCTTCAGTTACAGTTAAACCAAGATCTCAGCATCTTGCATCAAGATGACGGCTCATCTAAGAACAAGAGGGGGGTCCTGCCAAAGCACGCCACCAACGTGATGCGGTCCTGGCTCTTTCAGCACATTGGGCATCCATACCCGACAGAAGATGAGAAAAAACAGATTGCTGCTCAGACAAACTTGACACTACTCCAAGTTAACAACTGGTTCATCAACGCAAGAAGACGAATCCTACAGCCGATGTTGGATTCTAGTTGCTCAGAAACTCCAAAAACAAAGAAAAAGACTGCTCAGAACAGACCCGTCCAGAGGTTTTGGCCTGACTCCATTGCCTCGGGAGCAGCACAGCCAGCTGCCAGTGAGCTGACTGTGTCTGAAGGGGCCGTCGTGACCATCACCGCGCCCGTGAGCATGAACGTGGACAGCCTGCAGTCCCTGTCATCGGACGGGGCCACGCTGGCGGTGCAGCAGGTGATGATGGCCGAGCAGAGCGAGGACGACTCCGTGGACAGCACGGGGGACGGCGGGGCGGCGCTGGCGCCCGGCCACCTGGGCGGGCTGGTCCTGGAGAACAGCGACTCCCTGCAGTAGGGCCCGGCCGCCGGCGCCCCTTTTTATAGTTTGCACAGCAAACATTTTACACAGTTTTATTTCTAATATGTTTTATATGTAGGCATAGAAGAGTGCACTTTTGTATTTCATAGTAAGCTTCCAGGGCGTCTTTGCCGGTGCAGCGACTTCTTTCCAGGTGTGTGTGCGTGTGTGTGCACGTGTGTGTGTGTGCGTGTGTGCGTGAGTTTTTAAGGAAATTCTTTAAAGGTTTAACGCTAAAAATGTGATGAATGACAAACACCTCCGCCCCCCAACGAGCCCCTGATTAGGTTAAGGACTAGTGCTTCCATTTTCTGAGCGATTACGCAGTTTTAATTTTGTTCTGTGGGTAAGGCAGGCCTCAGGGGGCTGGTTCACTTGTCAGCCCCGGGATTAGGAAGAAGCCTCTGCACCTGGAGACCGCCCGTGCGAGGCGGGTGACAGCACAATAAACCGCGTGTGACCTGTGGTGGATGTTTGGCGACTCAGATGTGGTTCCGTTCTCATGTTCCGTGAGCCTGTGTCATTTGCTATATATGAAAAGAAACTCCTATTTTTACCTTGCTGGAATTATTGGATAAAAAGCTATTTTTATAAATTCCGTATGAATTGGATTATGACTATGTCAAGGGTAAATTCTAGAGGAGAAACAGTACACACTTATTGACTGTCTCAATTTGGAATGTTCTGAATTGGCCAAATTTGATGAACCTGCCCCCAGTTAGCTAGTATTCTGGTTCTCTGCTCTCCCAGGGTATTAATTCACATTTTCTACTATAAAAGAAACATCTATTTAATGAAATTTTGATATCTTCAAATTTTAGTCAATATGTTGCTCAGATTGCAATTTACACTTTATCTAAACGTGCGTCTCAAGGTATTTGCTAAGTAGGGCTTAGCTAAGTTAAGTGGTAGCCGGTGGTCAGTTAAAAGCTTTTGCTGACTGTTTCCGTCTGATTTAAGTCTGACCACGGTTGAGTGGTGATGTGCCGTGTTAGCTGGGCGTTGTCTTAGGAGCTTTCGGTCAGCGTATGTTATGCATAGAACGTGTGTCATAAACTACTATAAAGTGTCCATCCTGTTGGCTCAGAGCAGGCAAAGAGCAGACCCTTGGCTTTGTTACACGATTAGTGCATGTCCACTGCAGGATGGACAGGAACCGGCAGGGCCTGGGGGTGGGGTGCCAGCGGCTCGTCATCACTCGGTCGGTGGTTCTTCCTCTGACTTGATCACATCACATCTGGATAACGGTGGGACTTCGGCTCCTGGTGACCAGATGGACCACAGAGCAGTCTGGGTTTGTTTCTCTGGGTTTGGATTTGCATCTGCCAGTTTACTTTCAAGTGAGGCTTTTTCTCAGAGAGGAAGCAGGACCTGGTTTCACAGAAGACGTCTCTGCGTCACCATCAGTGGGACACCGGAAGCCCTGAAGGACAGTCTAATGGTCATCAGCTCCTGAAAAGCAGCGACAGTAGTTGGCTGTGGACCAAGGCTATCCAGAAGTGCTCTGAGCAAGTGCAGATTTTTTTTCTGGAACTGACTTTTTCTTCCCAAATTATTAATAATTAAAGTTAGTCATAGGAGAGTACTTCCTGGATAACTTAGAAGGAAGCAAGAAATACAGAGGAATTTCTTTTAAAATATTTCAGGAGATTTAAAAGAAAAACTTGACTCTCTTTTGGGGGAGAGAATAACATTTTTAAGCAGCTATTGTGTTCCTTTTAAACAATTTTATATATTTTAAGTCACATCTTTTAAACTACAGCAGTTTGAAAAATTGTTTTAAGTCCAACAAAGTTAGGATTTAAGACTAGAGCCTGTGGAAGCTGGCCAGCCACCTTCTCCCTCCCTCGCCTCCCTCTGTCCCTCTGACCTCAGGTTCAGGTTGGTGGTCACTCCTGGTCAGTTTCCCCAAGCAGAAATCCTGTTCCCTGGAGCCGGGGTACAGGGCTCGGGCTGCACAGGCTGCAGCAGCGTGGACATGGGGCCACATCAGGGCCATGTTGGGGTCTGGCAGTCGGTGCCTGGGGTCGCAGTCCCTGCTCCCTGCAGCTGGAGTCTGCATCCTGGTCGCTACATTCAGAGGACTAGGATAAAGATCATTCGAGAGGGGGCATTTCAAGCTCTTCCCATGAGTAACTAATGGGATCTTAACCCAACAGGCAGACTGTTTTGGTTCATAAGCCACTGTCTGGGGCATTGGTAGTTAGCTGGCACCTAATAAAGACCCATTTTCCAGCCCCTGGGATTTTAAGAGCATCTGTGAGAGCACAACCCTGCTGAGCTCTCATCTTAAAGGAATTTGCTCTTGTTAAATTCTTTTCCCTGAAGGATGGTTTTGACTGTGTCTTGCAACCCAGGTTGAACGTGTCGAGTTACCTGCTGTTCAGCTCTTGAGTGGGTAGCAGATGGCTGGGCCATGTCCAGCCACACTCCAGCTGCTGCAGTAATGCAGCTTTCGTGTTTTGATTCCAGAAATAAAACAGTGTAAGTGTTTGTCCAGCGTGCAATGTACGGTGGGCCACAGCCCCAGCTCGCTCAAAGACCACAGGGCCCTGATGCTGGAGCCACTGTGGCCCGAGTCCCAGAGTCTTCTCCACATAACCTGCCCACGACCTGACCTGACTCTGACTGGGGCGATAAAGTGGGGGAGCACCTTTTCTTTTAGACAAGCTCAGACATCCCGGGAAAGTGAGAACGGCCCGCCTCTGGTAGTTAGGGACAGAAAAAAAACCCCGCCACCCTCCCCTAATTTAGTTCTGTCTGGTCTGTGAACTGACAATCTTTAAATGTGAATGCTGTAACAATGTTTTCTTGGATTGTTGTCTTTGAAAGGGATTTTTGTGAAGCAACTGATTTATCAAAGCAAAAAAATTAAAAACAGAAACATGCTTCAT EMBV3_05810 AAGAGCTCCTGAAGGACCGTGAGTCTAAAGAGATTGAATGGGACGACCTGGCTCAGTTGC Gene GeneID:100295883|LOC100295883:XM_002688556:203_cdna Constitutive 0 NULL GeneID:100295883 7 GENE LOC100295883 NULL similar to cytochrome P450, family 4, subfamily F, polypeptide 2 EMBV3_28945 GCATGAACTGTTTTGATGCCATTTGGGGAGTGTCCACAATATTCATGGCAGTCTTCCTGC Gene BVT0102_030010 + 0 NULL GK000005.2:63092548-63097772 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192223 TCONS_00192225 TCONS_00192227 TCONS_00192228 TCONS_00192224 1 XLOC_117142 Coding TCONS_00192223 XLOC_117142 Coding Coding SLC25A3 5:63086300-63095057 j TSS143908 3891 1 TCONS_00192223_2 361 0.167566178360319 8 0.556532663316583 7.39401123051402e-05 3.71063017093294e-06 7.0013645809341e-13 2.35550321121798e-05 4.66194648679361e-05 3.27644903622337e-13 7.43211755127099e-05 2.24394954418181e-05 0.000420346094222746 0.000107082688535686 0.000354225335343838 8.43040320440934e-05 1.56306140046036e-10 7.78405142007726e-05 1.6841743787194e-05 0.0160877131461809 0.0105946776791862 0.0158827585178583 1.41947892406168e-12 8.2555182899524e-06 8.18791439985598e-06 0.00498765333625363 0.00378783744474657 0.00665396201118587 1.9457664962497e-17 3.85155872770412e-05 8.54187310542707e-05 0.00130640997944423 0.000617788231447464 0.0018629321885416 XM_005206513.1 SLC25A3 PREDICTED: Bos taurus solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 (SLC25A3), transcript variant 0.0 2657 100.00 0.378308918015934 NM_002635.3 SLC25A3 Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 (SLC25A3), transcript variant 2, mRNA. 0.0 1990 86.69 0.42739655615523 TCONS_00192223_2 sp|P12234|MPCP_BOVIN MPCP_BOVIN Phosphate carrier protein, mitochondrial; 0.0 653 96.96 0.997229916897507 1 coding 0 0 0 0 0.0100328461153235 0.925307924605716 -0.00847650947442413 0.887472767491955 GTCGCGCTGACGACGCGCGAAGGGCACAGACCTAAAGGCCCGGAGGACATTCGGCCTCTGTGAGCTGCAGCCTTTCTGAGAGACCGGTTGTGTGTTCGCCATCTTAGGGAGAAGATGTACTCGTCCGTGGTGCACCTAGCGCGGGCGAACCCCTTCAACGCGCCTCACCTGCAGTTGGTGCACGATGGTCTCGCGGGGCCCCGCAGCGACCCCGCCGGGCCCCCGGGCCCACCCCGCCGCTCTCGCAACCTGGCAGCCGCCGCTGTAGAAGAGTACAGTTGTGAATATGGCTCCGCGAAGTTTTATGCACTGTGTGGCTTTGGTGGGGTCTTAAGTTGTGGTCTGACACACACTGCTGTTGTTCCTCTGGACTTAGTGAAATGCCGTATGCAGGTGGACCCACAAAAGTACAAGAGCATATTTAATGGATTTTCAGTTACACTCAAAGAGGATGGTTTTCGTGGTTTGGCCAAAGGATGGGCTCCGACTTTCATTGGCTACTCCCTGCAGGGACTCTGCAAGTTTGGCTTTTATGAAGTCTTCAAAGTTTTGTACAGCAACATGCTTGGAGAGGAGAATGCCTATCTGTGGCGCACATCACTGTATTTGGCTGCCTCTGCCAGTGCTGAATTCTTTGCTGACATTGCTCTGGCTCCTATGGAAGCTGCTAAGGTTCGAATTCAAACCCAGCCAGGTTATGCTAACACTCTGAGGGATGCAGCTCCCAAAATGTATAAGGAAGAAGGCTTAAAGGCGTTCTACAAGGGGGTTGCCCCTCTCTGGATGAGGCAGATACCATACACCATGATGAAGTTTGCCTGCTTTGAACGTACTGTTGAAGCATTGTACAAGTTTGTGGTTCCCAAGCCCCGAAGTGAATGTTCAAAGCCAGAGCAGCTGGTTGTCACATTTGTGGCAGGTTACATAGCTGGAGTCTTCTGTGCCATTGTTTCTCACCCTGCTGATTCCGTGGTGTCTGTGTTGAATAAAGAGAAGGGTAGCAGTGCCTCTGAGGTCCTGAAGAGGCTTGGATTTAGAGGTGTATGGAAGGGACTCTTTGCCCGTATCATCATGATCGGCACTCTGACTGCACTACAGTGGTTTATCTATGACTCTGTGAAGGTCTACTTCAGGCTCCCTCGCCCTCCTCCACCTGAGATGCCAGAATCTCTGAAGAAAAAGCTTGGGTACACTCAATAGATAAATGAAAGCAAATATGGACTGAATCTGCGTGTTGATCAGTGTTTGAGGAAAATGCAGAAGGAACTTTTATATATTTGACAGTGTAGGAAGTTGTCTATTCCTAATATAATTACTGTAGTACTCTTGTCAAAAGCAAGAGTTTCAAACTTAATGTGGAAATAAACCCAACTGTACATGATTTGTCTGTGATTTGATAATTATTTTTAAAGCTAAAGAATTAATTCTAAGGTGGAAAGAATTATACATACATTAAAACCTCAAGGAAAATAATTTACTGTTGGTTGAATACTGTGATCCCTATTTGTAAGTTGTTATATGTCTCAAGTTTGGTCACTCGAGAGAGTTCTTACATTTTTAAGAACCATGCCCTAAATTTGTAAAAACTTAATTTAACTGTTAAGTGTGAATATGGATAAATATTCATTTATAGTTATATTTTGACCAACACATTTCAGTATATAATCAAATTTTTGCAACACTTAGTATACTTTTAAAAATCCTAATCCGTTTACTAATCCTTATTTATTTGTAAAATAATTTAATCTAAATTAGGCTAATTCTTAGAATGATAGTCTTTAAAACACCAAAGCTATTGACAGCTAGAAAGTATTTCAAGTAACTTAATAGTCCTTGCACAAATCTGACTTTCTGACTTACAGAAAGTTTACCTTAAACTCTTTTCAGTTAGTTTTTCACAAAGGTACTTACTTGACAACTGGAGTGGGTGAATGCTCTTGAGAAAGCAGCACTTTATATATTCACGCATGTGATACTTGATTTAAACCCAAACTGATTTTTCTAAAAACTACTAAGTTTCCCCTTGTATTTGGCTAGGAATTGTTTTCAAGTCTGATTACATTTTACCTTGAGGCCTTTGGGTATAATAATCTGAATTTGCAGCCCCTGTGTAAATTATGCAGATAGGACCTCAGGAAAAAACTTCTAAGCAGTCTAAACAGCAAGAGAAGTGTTCTCACTACAAACCCATGTAATAAGGATCAGTGAACTAAGTTTAGAAAACAAGTGTATCTTCCTGCGTGTTAAGCTTCTGTATATTATCATCACCAGGTTTAGTTTAAGGTTCCGGTCTTTGTTTTACCTGTGTTGCAGAGGAAGGGGAAGGGTTATGCTTATAAATTTGGACCAAACTGTCAAAAGGTAGAGCTGCAGTCTGAGCTCGAGCAATGATGGCTGTGACAGTTGGTGTCACCAGTGTGCATCAGTTACTGTTGTGTGACGAATCATCTGAAATATATTGGCAAGAGACAATATGATCTCAAGCTTTTTGTGGGTCAGCAATTCTGGAGCTTCTGTTGGACCTTTCTGCTTCTGGGTTTCTCCTGAAGTTAAGTGAGATGGTAGCTCTGGGGTCCTCTCCAAAGGGTTTTTGACATCCAGGCTAGGAGAGATTCTTTGAATATCTCCCTATTAGTGGCTGAGCCTTTCCTTGAAAGGCAGCTGGACTTATTTCAGGACTCTGAAGCTGGGTCTTTTTTAGGACTTAGCCTTGCAAGTGATCACTTTGGTCAGCAGGTACCTGGTCAAGGTGATCACTATACTCTTGATCACCTGAAGTCATAGAAGGTCAAATCCCAGCTTCAAAGAAAAGGAACACTGACTCCACCTCTTTCTAGGAAGAGGATCAGTTACATTGTAAGAGCCTGTGGGATTGGATATGTATGAATATTATATGTGTGTGTGTGTGTGTGTGGCCAGTCAAAGGTGGACTGTGGATTTAGGGTATGTGGTTCAGCCAAACTTCATCATGAGATGGATTTCCACTGCCAGCCTTGTGGGATTCAAGTTTTTATTTTCAAGAGAGGCAATAGGTTTTATTTGTGGATATTGACATAAAGTGTGCTGTGTTCAAGCTGTCAAGAATTACTTGCTATTTATAGTTCAGAGATACTTCAGAGCTATTACTAAGGTAAAACCATTTCATCAAAATTCAATTAAAATGACCACTTAAAATATGAATTTCCACTTTATATTTTAAAGTTGAATTCATGCTGAAAATACTCTAATAAGGAAATTTTAATAACATTGTTTTCTCACATTTAGTTTTAATAAAACTTCAGTTCCACAAAGTAGAACCCAGTGGAATGAGTATATATGATTACTAGTTTAATTGGATTATAAGAAAGTCTGATTTTTGCTGAATTATATTTGTGGCTCAGCTGGTAAAGAATCTGCCTGCAATGCAGGAGACCTGGGTTCCATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCCACCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTATGTGGTCCATGGGGTCTCAAAGAGTCGGACATGACTGAGTGACTTTGGCTTTCAGTGATACATACAATGAAATTGAAGTTACAGTTTAACCAAATCTGTATCTTGTGAAAGATGCATGAACTGTTTTGATGCCATTTGGGGAGTGTCCACAATATTCATGGCAGTCTTCCTGCTAAATTAAGAGTTATATGTTGTTTCTTTAGTATAAATTATATAATCTTCAATGTTATATGCCAACTTGGATGGGAAGGGGTTGGGGGGAGAATGGATACATGTATATATATGGCTGAGTTCCTTTGCTGTTCACCTGAAACTACCACAACATTGTTAATCTGCTATACCCCAATACAAAATAAAAAGTTTAAAGTTAAATTATGTAATTTTTTACAC EMBV3_12520 AGTGCTGATTAATAGGGATGGAAGTGTGTGGAGGGTGAGAAGGCTAAACCATGGGACGAG Gene BVV0102_094812 + 0 NULL GK000010.2:37206839-37288357 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013541 TCONS_00013524 TCONS_00013550 TCONS_00013523 TCONS_00013525 TCONS_00013532 TCONS_00013530 TCONS_00013546 TCONS_00013522 TCONS_00013528 TCONS_00013534 TCONS_00013539 TCONS_00013529 TCONS_00013531 TCONS_00013542 TCONS_00013533 TCONS_00013549 1 XLOC_008148 Coding TCONS_00013546 XLOC_008148 Coding Coding MAPKBP1 10:37192994-37338677 j TSS10029 22617 1 TCONS_00013546_17 3114 0.00159172304019101 53 0.845114701884927 8.95203349733734e-05 8.47499942514675e-05 0.000238484555933341 1.08131979225141e-20 1.40589874164465e-49 8.28753278674485e-23 1.16103365078136e-05 3.82346787303145e-10 2.08696417426396e-16 2.31292124324859e-20 4.093993761942e-25 6.86457744509082e-27 2.01395678246011e-15 6.66795792144285e-06 7.37052625045751e-53 0.00159676860203667 7.77416390455609e-05 0.00169613661458392 7.37399801885541e-05 1.74601547492003e-107 5.6358703543751e-12 0.000174298273782335 0.000404889784739423 0.000661508441625565 2.53842543161911e-08 3.60422685699008e-18 0.0001695014015912 3.52130202681904e-22 1.3873858793668e-07 5.41147279428344e-08 XM_005211582.1 MGA PREDICTED: Bos taurus MAX gene associated (MGA), transcript variant 0.0 1.586e+04 100.00 0.388689923508865 XM_005254248.1 MGA PREDICTED: Homo sapiens MGA, MAX dimerization protein (MGA), 0.0 1.597e+04 89.39 0.53305036034841 TCONS_00013546_17 sp|Q8IWI9|MGAP_HUMAN MGAP_HUMAN MAX gene-associated protein; 0.0 5222 86.19 0.999678869621066 0 coding 1 1 1 1 0.00646278827545937 0.957936872245917 0.00316988250564505 0.969861671298071 TTATCTTACTACTGATTTTCCCACTGGAATCATGGAGGAGAAACAACAGATTATATTGGCTAATCAAGATGGTGGGACAGTGCCAGGAGCAGCACCTACTTTCTTTGTCATCCTGAAACAGCCAGGAAATGGCAAAACTGATCAAGGAATTTTGGTTACTAATCGGGATGCCTGTGCTTTGGCTAGCAGTGTGTCATCACCAGGAAAATCTAAAGGAAAGATTTGCCTTCCAGCTGATTGTACTGTAGGAGGAATCACTGTCACCTTGGATAACAATAATATGTGGAACGAATTCTATCATCGAAGCACAGAGATGATTCTGACGAAGCAGGGGAGACGCATGTTTCCTTACTGTCGTTATTGGATAACAGGTTTAGATTCAAATATGAAATATATCCTTGTCATGGATATATCTCCTGTGGATAATCACCGTTATAAATGGAACGGTCGCTGGTGGGAGCCCAGTGGGAAGGCTGAGCCCCATGTTTTGGGGAGGGTTTTTATTCATCCAGAATCTCCTTCCACGGGTCATTATTGGATGCATCAACCAGTGTCTTTCTACAAACTCAAACTTACAAACAATACACTGGACCAAGAAGGGCATATTATCTTGCACTCTATGCATCGCTACTTGCCACGGCTTCACTTGGTGCCTGCAGAAAAGGCTACTGAAGTGATACAATTAAATGGCCCTGGTGTCCACACTTTTACCTTCCCACAGACTGAATTCTTTGCAGTAACAGCTTATCAAAACATTCAGATTACCCAGTTGAAAATAGATTACAATCCATTTGCTAAAGGCTTCCGGGATGATGGGCTGAATAGTAAGCCCCAGAGAGATGGAAAGCAAAAGAACAGCTCTGACCAAGAAGGGAACAGTGTTCCCAGTTCTCCTGGTCAACGGGTCCGTCTTACAGAAGGTGAGGGGTCAGAGGTGCAGCTAACAGATTTGGATCCTTTATCAAGGGGTCAGGAAACTTCAGGCAAGGGTTTGGAGAAGCCTTCCCTTAATATAAAGCGAGATTTTCTTGGTTTCATGGATATTGATTCAGCCCTTGGTGAAGTCCCTCAGTTGAAGCAAGAGGTTTCTGAAAGCCTTGGCAACAGTTTTGAAGATGGCTCCCATGTAACGTCACCATTAAACCCAAATGAAAACTTCAATGTTGTCATTAAAGAAGAGCCTCTGGATGATTATGAATATGAACTTGGTGAGTGCCCAGAAGGGGTCACTGTGAAACAGGAAGAGACAGATGAGGAAACAGATGTATACTCAAACAGTGATGATGATCCTATACTAGAGAAACAGCTGAAGAGGCACAATAAAGCTGATAACCTAGAAGCTGACCATCCATCTTCTAAATGGCAACCAAATAGCCCATCAGGTGTTGCTAAAGCTAAAATGTTCAAATTAGATGCTGGAAAGATGCCAGTAGTCTACCTGGAGCCCTGTGCTGTCACCAAAAGCACAGTGAAGGTTTCTGAGCTCCCTGACAACATGCTTTCCACATCTCGGAAGGATAGATCTCTGTTGACAGAATTAGACTATTTGCCTGCGTACGTTGAAAATTCTAATGAGACTGGCTTCTGCTTAGGCAGAGAATCAGAAAATGATCTTGGAAGACATTCACTAGATATCAGAGTGGTACAAAAATATCCCTCACTTAAAGAAGCTCAGTGGAAATACCCTGATATATCTGACAGTGTTAACACAGAAAAACTACTTGATGGTTCAAAGAGTTCAGTTGGGGACTCGTTTTTAGGAAAAGAGGACTTGGGCAGAAAGAAAACTATGCTTAAGATTTCAGCGGCTCCCAGGACTGTGAATGCTAATCAGAATGCCCCTCCAAATGTCCCTGGAAAAAGAGGAAGGCCACGAAAACTGAAACTGTCTAAGGCAGGGCGGCCACCTAAAAACACAGGAAGATCTTTAACTTCTACGAAGAACACTCTTACGGGCCCTGGAAGTACCTTTCCAGATGTAAAACCTGATCTGGAAGATGTAGATGGTGTTCTCTTTGTTTCCTTTGAATCAAAGGAAGCTCTAGATATTCATGCAGTTGATGGAACAAATGAAGAATCTTGTAGTCTTCAGGCATCAGCTGCAAATGACCCAGGTTGCAGAGCAAGAATTTCCCAGTTGGAAAAGGAATTGATAGAAGATTTGAAGGCCTTACGGCACAAGCAAGTCATACATCCTGGTCTTCAAGAAGTGGGCTTAAAATTGAATTCAGTGGACCCAACAATGAGCATTGATCTTAAGTACTTGGGAGTACAGCTACCTTTGGCTCCAGCCACTAGCTTTCCATTCTGGAACCTTACCGGAGCCAACCCTGCCTCTCCTGATGCTGGATTTCCCTTTGTTTCTAGGACAGGGAAGACCAATGATTTCACCAAGATCAAGGGATGGAGGGGAAAGTTTCATAGTGCTTCTGCATCTAGGAATGAAGGTGGAAATTCTGAAGGTCCATTGAAAAACCGTTCTGCTTTCTGCAGTGATAAGCTGGATGAATACTTGGAAAATGAAGGCAAGCTGATGGAAACAAGCATGGGTTTCTCTTCTAATGCTCCCACGTCGCCTGTGGTATACCAGCTTCCCACCAAGAGTACCAGCTATGTTCGAACACTTGATAGTGTGCTGAAGAAGCAGTCTACCATTTCCCCTTCTACCTCTTACTCTTTGAAACCTCATTCTGTACCCTCTGTCTCTCGAAAGGCAAAGTCTCAAAACAAACAGGCAACTTTCAGTGGCCGAACTAAATCATCTTATAAATCCATTTTACCATACCCTGTTTCACCAAAGCAGAAGCACACTCCTATGATTCCAGGAGATAAGATTACCAAGAATTCTTCAAGCACCACCTCAGAAAACCGGGTGAATAACTTGATTGTGCCAACTTTAGATGAAAATACATTTCCGAAGCAAATTAGTTTGCGGCAGGCACACCAGCAGCAGCAGCAACAGCAACAACAACAGGGATCTCGCCCTCCAGGCTTGTCTAAGTCTCAAGTGAAGCTAATGGATCTGGAAGACTGTGCACTTTGGGAAGGAAAACCAAGGACCTATATCACTGAAGAGCGAGCAGATGTATCCTTAACAACTCTGCTTACGGCTCAAGCATCTCTCAAAACTAAACCCATCCATACGATCATAAGGAAACGAGCGCCTCCATGCAACAATGACTTCTGTCGATTGGGGTGTGTATGTTCAAGTCTAGCTTTGGAGAAGCGCCAGCCTGCTCACTGCCGCCGACCAGACTGCATGTTTGGCTGCACCTGTTTGAAAAGAAAAGTTGTACTTGTTAAAGGGGGATCCAAAACTAAGCATTTCCAGAAGAAGAGTGCTCATCGTGATCCAGTATTTTATGATAATTTGGGAGAGGAGCAAAAAGAAGAAGGAGAAGAGGGAGTCAAAGAGGAGGAAGAACAATTGAAAGAGAAAAAGAAGAGAAAGAAACTAGAGTACACTATCTGTGAAACAGAACCTGAACAGCCTGTCCGACATTACCCACTGTGGGTAAAAGTAGAAGGTGAAGTAGATCCAGAACCAGTGTATATCCCAACGCCTTCTGTCATTGAGCCTATGAAACCATTGTTGTTGCCTCAGCCAGAAGTTTTATCTACTACTGTGAAGGGCAAACTACTCACTGGAATTAAACCTGCAAGGGCATATACTCCCAAACCCAATCCTGTGATCCGGGAAGAAGACAAGGATCCAGTCTACTTGTACTTTGAAAGTATGATGACTTGTGCCCGAGTTCGAGTGTATGAACGAAAAAAAGAGGAAGAGAGACAACCATCACCATCACCATCCCCATCATTTCAGCAGCAGGGCTCATGTCATTCTAGTCCTGAGAACTGTAGTGTAAAGGAGCCAGCTTCTGAACAGCAGCCTTTGAAACCACTCACTTGTGACCTGGAGGATGATTCTGATAAATCACAAGAAAAGAGCTGGAAGTCTTCCTGCAATGAAGGGGAATCAGCTTCTACCTCCTATGTGCATCAGAGGTCACCTGGTGGTCCCACCAAACTGATCGAGATCATCTCAGACTGCAACTGGGAGGAGGATCGGAACAAGATTTTGAGCATCTTATCCCAGCACATCAATAGCAACATGCCACAGTCACTTAAGGTGGGCAGCTTCATCATTGAGTTGGCTTCTCAGCGAAAGAGCCGGGGTGAAAAGAATCCTCCTGTTTATTCTTCTCGTGTGAAAATCTCTATGCCATCATGTCAAGATCAAGATGATATGGCTGAGAAATCTGGATCAGAGACTCCTGACGGTCCATTATCCCCTGGGAAAATGGATGATGTCTCTCCCGTGCAGACAGATGCCCTGGATTCAGTGAGGGAGAGATTACATGGAGGCAAAGGTCTGCCCTTTTATGCAGGGCTTTCTCCTGCAGGGAAGCTTGTGGCCTATAAACGTAAACCCAGTTCAAGCACATCTGGGCTTATCCAGGTTAATGGTAAGAGTTACCCGCAGGCTAAGTTGCTATTGGGACAGATGGGGGCATTGCATCCAGCCAATAGGCTAGCTGCTTATATCACAGGCAGGTTGCGACCCTCAGTCCTGGACCTCTCAACCCTCAGTACTGTCATCTCCAAGGTAGCATCCAATGCCAAGGTGGCTGCATCCAGGAAACCACGCACCCTGTTGCCTTCAACATCCAATTCCAAAACGGCATCATCTTCTGGCACTACAACAAATCGCCCTGGGAAGAATCTGAAGGCGTTTGTCCCGGCGAAAAGACCAATTGCGGCTCGACCCTCTCCTGGTGGTGTGTTCACACAGTTTGTGATGAGTAAAGTTGGAGCCCTGCAGCAGAAGATCCCTGGAGTTAGCACACCCCAACCCCTAACAGGGCCACAGAAGTTCAGTATCAGACCTTCTCCAGTAATGGTCGTCACACCTGTGGTTTCTTCTGAGCCAGTTCAGGTGTGCAGCTCTGTGACTGCTGCTGTCACTACTACCACCCCTCAAGTGTTTTTAGAAAATGTTCCTGCTGTGACACCTACGACTGCTCTATCTGACGTGGGAACTAAAGAAACTACTTATTCTTCTGGTGCCACCACTGCCGGGGTTGTTGAGGTCTCTGAAACTAATACCAGCACCCTTGTAACACCTACCCAGTCTACAGCCACTTTGAACCTTATCAAAACGACTGGGATAACTACCCCTGTGGCTTCAGTTGCTTTTCCTAAGTCTTTGGTAGCATCTCCTCCAACCATAACTCTTCCTGTTGCTTCCACTGCCTCCACCTCCATAGTCGTGGTGACCACAGCTGCATCTTCTTCCATGGTGACCACACCAACTTCATCTCTGAGCTCTGTTCCCATTATACTCTCGGGAATTGATGGGAGTCCACCAGTGAGCCAGAGACCAGAAAATGCCCCTCAGATTCCAGTGGCTCCTCCACAGGTCTCTCCTAACACAGTGAAACGTGCTGGACCTCGATTGTTGTTGATTCCAGTGCAGCAGGGTTCTCCTACTCTTAGGCCTGTCCCAAACACACAACTTCAGGGACATCGGATGGTCTTGCAGCCTGTTAGGAGTCCAAGTGGAATGAACCTATTCAGGCACCCTAATGGGCAGATTGTCCAGCTTCTCCCTTTGCATCAGCTTCGAGGATCTAATAACCAGCCCAACTTACAACCTGTCATGTTTCGGAACCCAGGGTCTGTGATGGGAATCCGTTTACCCACTCCTTCCAAACCATCAGAGACTCCACCTTCTTCGGCTTCGCCCTCTGCTTTCTCCGTTGTGAATCCTGTAATTCAGGCTGTTGGGTCTTCTCCAGCAATGAATGTTATCACTCAGGCACCATCATTGCTTTCTTCTGGACCTAATTTTGTGTCTCAGTCTGGTACATTGACTCTGAGGATTTCCCCTCCTGAACCACACAGTTTCACAAGTAAAACAGCCTCTGAAACCAAAATAACTTATAGTTCAGGAGGGCAGCCTGTTGGTACAGCCAGTCTTATTCCTCTCCAGTCTGGTAGTTTTGCCTTGTTGCAGCTCCCAGGACAAAAGCCTGTTCCCAGCTCCATTCTTCAACATGTTGCTTCACTTCAGATGAAAAGAGAATCTCAGAATGCAGACCAGAAAGATGAAACAAGCTTTTTAAAAAGAGAACAAGAAACCAAGAAGGTTCTGCAGTCAGGAGAAGCTGTAGAGCCTGAGACTAATATAATAAAACAAAACTCAGGAGCTGCTGTCTCAGAAGAAACTCTGAATGATTCCTTGGAAGACAGGGGTGATCATTTAGATGAAGAATCCCTTATAGAAGAAGGGCCTACAGCTGTTAAACCTTCTGAGCATGTCTGTAGCACTGGCTCACACGCAGGTGAAGACTATAAAGATGTTGAGGAAGAATATGGGATTAGGAACCATAACAGTTCCAAAGAAAAACTGACTGTTCTAGAAGTTAAGACCATTTCTGGAAGAGCCAGTAACATGACAGTCCAAAGTGTGAATAATGTGCAGCTTAAAAAACTTGGTGATGTGAAAGTGGAACAGCAGAAAGGCTTAGACAATCCAGAGGAAAAATCAAATGAATTTCCAGTTATCTCTAAAGAAGAAAGCAAAGTTGAATTTTCAGGCAGTAGAGTTGCGGAGCAGCAATCTAATCCAAAGCCAGAGGCCAAGGAGAAGGAATGTGGAGAGTCTCTGGAGAAGGACAGCATTAAGGAGAGGTGGAGAAAACACTTAAAGGGCCCTTTGGCCCAGAAATATGTTAGAACTTCACAAGAAGGCAAGAATGAGACAAATGAGCAATTAATTAAAGAAACAAAAACTTGTAAGGAAAATTCAGATGTGTTTCAACAAGAACACAGTATCTCTGATTTACTTGGAAAAAGTGGAACTACTGAGAATGCCAGAATTTTAAAAACTGAATGTGATTCTTGGAGTAGGATTTCTAGTCCTACAACCTTCTCCATTGTCCCTAGGAGAGCTGCCAAAGGGAGCAAAGGGGACGGACATTTTCAAGGTCACTTACTGCTCTCAGGAGAACAGATAAAACCAAAGCAAGAGAAGACGGGTGGCAGAAGCAGTACTGACTTCACTGTTTTGGAGTTGGAAGAGGAAGACGAAGAAGATGAGAATGAGAAAACTGATGATTCTATTGATGAGATTGTGGATGTTGTTTCTGACTACCAGAGTGAGGAGGTTGATGATGTAGAAAAGAATAACTGTATAGAATACATTGAGGATGATGAAGAACAAGTGGACATTGAGACTGTAGAAGAGCTCCCTGAGGAAATTAAAATCGCCCACATGAAGAGCACAGCTGTCCATACAGAGATTTTGAAACAGCCGTGCTGTACGCCTGTCTCTGCAGATGAAAAAGCTACTGAAAGGAGTCGAAAGGCTGCACAAGTTCCTCTAAAGCTAAAACCTGATTATTGGAGTGAAAAACTACAGAAAGAAGCAGAAGCTTTTGCATATTATCGCCGGACACACACTGCCAATGAGCGCCGCCGCCGTGGTGAAATGAGAGATCTCTTTGAGAAGTTGAAGATCACATTGGGGTTACTTCATTCTTCGAAGGTTTCCAAAAGTCTCATTCTTACTAGGGCATTCAGTGAAATTCAGGGGCTAACAGATCAGGCAGACAAGTTAATAGGACAGAAGAATCTCCTGACTCGCAAACGGAATATTTTGATACGGAAAGTATCTTCACTTTCAGGTAAGACAGAAGAAGTGGTCCTGAAGAAGCTAGAGTATATTTATGCAAAACAACAAGCAGTAGAGGCACAAAAGAGAAAAAAGAAGATGGGATCAGATGAGTTTGACGTGTCTCCCAGAACTAGCAAACAGCAGGAAGGAGCTTCTGTATCATCTGTAGATCTCGGACAGATGTTTATAAATAACAGAAAGGGGAAGCCTTTGATTCTTTCCAGAAAAAAAGACCAGGCCACAGAAAATACCTCACCCTCTAATACTCCACACACCTCTGCCAACATTGTGATGACTCCACAAGGGCAATTGCTTACCTTGAAAGGTCCCCTATTCTCAGGACCAGTGGTTACTGTTTCTCCTGCTCTCTTAGAAGGAGATCTGAAACCTCAAGTTGCCAGTAGTGCTGTGGCTCAATCAGAAAATGACGACTTATTTATGATGCCAAGAATTGTTAATGTGACATCATTGGCAACAGAGGGAGGTTTGGTAGATATGAGTGGCAGCAAATACCCCCATGAAGTTCCTGATGGCAAGCCACCTGACCACCTGAAAAACACTGTCAGGAGTGAGGATAACTCCTGTGAAGATTTGGGTAGAATCTCTTCCAGAGGCAACCATAGAGATGTCAGAATGACACTGGGTACAGCACAGGTTTATCTGTCACATAAAGATTCTGGTTTTCCACAAATAGTTGATGTTTCCAGTATGCAAGAAGCACAAGAATTCTTACCCAAAAAGATTTCTGGTGATACCAGAGGGAGTCAGCATAAATGGAAAGAGAGTGAATCAAGACGGGAGAGACTGAAGACAAAGGAGTCTCCATTTCATAAATTAAAGATGAAAGATCTCAAAGACTCAAGCATAGAGATGGAATTGAGAAAGGTAGCATCAGCTATAGAGGAAGCAGCATTGGATCCCAGTGAACTGCTAACTAGTATGGAAGATGAGGATGATACTGATGAGACACTGACATCTCTGCTCAATGAGATTGCCTTTCTTAATCAGCAGTTAAATGATGACTCTGTTAGCCTGGCTGAACTGCCTAGCTCTCTGGATACAGAGTTCCCAGGGGATGCTCGCCGGGCTTTCATCAGTAAGCTTCCTCCTGGGAACAGAGCGACTTTCCAGGTTGGCCACTTGGAAACTGGTTTGAAGGAATTGCCTGATGTGCAAGGGGAGAGTGACTCTGTCAGCCCCCTCCTCTTGCACTTGGAAGATGATGACTTTTCTGAGAATGAAAAACAACTTGCAGAACCAGCCTCTGAACCAGATGTACTTAAGATTGTCATTGACTCTGAGATAAAGGATCCCCTCGTTTCCCAGAGGAAAGCGGGGGATGAAGGAAAGAGTGCTTCTGGCGTCCCTGCCGAGCCTGAAAGTGTGTCCTCACCCCCTGTCCTACACATGAAGGGTGGCCTAGAGAACAGCAGCACAGACACCTTGTGGAGGCCCATGCCAAAGTTGGCACCTCTAGGTTTAAAAGTAGCTAATCCTTCCAGTGATACAGAGGGTCAGAGTCTCAAGGTGATGCCTTGTTTGGCACCTGTAGCTGCCAAAGTTGGGTCAGTTGGACACAAAATGAACTTAACAGGGAATGATCAGGAATGCCGGGAGAGCAAGGTGATGCCTACATTGGCACCTGTTGTGGCCAAACTGGGCAACACTGGGGCCTCGCCAAGTTCTGCAGGGAAATGAACTTAGTTGTTCTCAGGCAGAAGCCAGGCTGTGAGGGGGAGCCTCCTTTCTCTGCAGGCACCTGTTTGTGTCATGGAACTGTGATCCTTGACTTTGAAATGTGGTGAATGATGGTAGAGAAAGGGGGTAGGGTGCTGACCTCCGTATAAGAAATTAACTACTATGAAATTCTGATCATGTTAAAATGTGTTACCTCACTTGTGGTGCTGGGTCTCCTCATCCTCTCGAAGAAGATGCGATCCATTACTGAACACGAGGTGCCCCTCTTACCCAAGGAATTTGTAACAAGACTAGGTCCATAGTGGTTCCTAGTTCTTCCCTCCCAGAGTAAAAGCTGCTTGAGACTTAGGAGTTGCTGTGGACTGAACCTTAGCTGATAGCTGTTGTTTTAAGTCTGAAGTCCAAGGAATGTGATGCACTTGTGCAAAGGGATCCAGAAGAGGTAGCTTTTAGTTGGTGTTTCAGAATAGGGGGAGAGAGGATGGGTACCATGGAATACCAAAGTGAAGGACTTAGTATCATTCAACAAAATTTTCTCTTCTTTCATATCCTAAGTAGCTTCCATTCCCTCACCTTTTCAATCAGAATTATAAATCTAAGCCTTCTGGTAAAGTAGGAATGCTTTTAAAAAAGCTTTTATTACTAAGGTAATAATTTTGAGATTTAAAAATTAACTAGTTCTCCCTTACTGTGTTTGGGTGTTGAGAAGACCATTTCACGGTACCAAGGATTTCTACCTTGAATATGTTTTTTGGAGGTAGACATACAGGGAGCCCTTCCCCTTTTCACAAATCACATCACTCAAAAGACATGTAAAATGATAAGCATTCCCTCCCCGTACCAGAGACAGTGGCCAAAACAAAACAAAACAAACTGTGGGGCTGGGTATTTCACAAGTCAAACCAGCCTCCTGGTGCTTGGAGGTTTCATTCACTGTTACCTGCACAGGATGTAAAGAAAAGAAAAGTCACAGTAGGCACTCTTTACCAGGGAAATAAGGCAGTATTTGAATCACAAGATATATTTTTTATTATCTGCTACCATGGATTCAATGATCTGTAGAGCTTTTTCACTCATTAGCTGTCAGGGTATGAAGGTCTGACAGCCTGTAAAGATAAAAAGATATTTATATTTTTGTATAGTTGTTTTCATAGATTTCTCAAAGGCTGAAGTTTTCAACCTAGAAGATGAGATTTGTATTGAGTATAGAAATGATGTTTCCTATCTAGTTTGTAAATAATCATGGTGCACTTGAGGGGTCTCTTGGAAACTCCTGGGGGCAAGAATCACTATTCTGAAAATGTATAGACTGGGATTTAGCTGCTGCATTTTGCCTTTCTTAAATAATTATATTTTGGAATGTAACCCCTGTTCTGTCTTCATTGACAGGATTTGCTTGTGTTGTGAAACAATAACACAAGAGCTTCCAGTGCCTGGGCTGTGCCTAGGCCGTGCTGTTTCTTCTACATCCCCTGCCTTCTTTATCCCAAACCCCACTCAGCATTTCTTCAGAACTAGGTTGTGAAACCAACTTTGGAATGGTCCTAGCCAGTGAATTATTACCTCCGTGGTTGGTTCCCTTTCTAGTAACTCTGGTAATAAACAGATTGAAAAGGGTGGGAAAGTTTCCTCTGCGAATTGCACCGGGAACACATTCTTTGTTGTTTTTTTTATGCTTCTTGCCTTTCTTGACCTCCTCATCAGCCTCCAGCCTTCCCACCTCTAAAGGTTACTGAAGGAGCTTCAAGTAGGTGATGAGTGCCCCTCAGCTTCTCATTATCCCTCCCACTTCTCTTTACCCAGGAGATTTCATTCAATGCCTTAGCCAAGGAATCCAGCACCTGTCTTCCCTGCTAATAACTGTCCTTGGAGATGCTAGTAGTTTAATCCAGGTATAGCAGTTTCCCATTATTTCTTTGCTTGTCTTGTCTTCGTGTTCCCTCCTGACTTTCCAAGGCTCTTAAAGCTTTTGAGGGTCAGCCAAGGAGCAGGCAAGTGAGCGAGTAATCCTCAGGAAAAGAAGGACCATTCTGCTTCTGAACACTGTTCCCTTTTTTAGAAGAAAATAGACAAATAGGTAGTATTCATTTCTTGATGGGAAGATATTTGACTGTTTATGGAAGATTCCAGAGATAGAAATGAGAGATGATCCAGTGTGTTCAAGGAAGGCTGCAGATGTCATTATAAACACCCCCACCCTGCCCCATAATGGTGTTTGCAAGACCTCTTAGAACTAGGGAGTTGTTAGGGCTAATTTGAGGAGGGCTCAGTCTTAAGAACAATCCTACAGTCTTGATAGAAAACTAAAAATCTCCAAAAACTCCAACCCTTTAAACCTTACCCCAGGAGAAACTGATCTATGAAAATTCATGTGTGACTATGAAAGATGTAGTTGAGTGAGGAGTTGAGGAATTGGGAGGATAGTGAGCTCTCACCCTAACTATAAGAAGCATGATCTCAGTAGACCAATAATTCGCCTTTTTATACATCTGTAAATAAATGGAATGTTTTTAAGAATATAATTATGTCAGATTTAGCTTTTTCTTTTATATATTAAATATATATCTTTCTTTTTCTGCTTTTGAAAAATGACTATTTTTTTAGAACCTAAGAACAGAAGAAGTTTGGTCAGTGGGAGAATGTATAAACTTGAAATAAATCAGTTACAATAATTAAAGCAGGACTTGGTGTTGCTAGGTTTGTGCTGAGTTGTAATAGAGGATTCTGATGCTCTGAGACATCTGGGATGGTCACTGAAGGAGTTTAATCATAGAAATTCCTTACTGTTTTCAAAGTTTCTGACATGCCATTTGGGGGAGGTTTTTTGTATTCTATCTTTGCAGCATGTTTTACATGGAGAATTTGAAATTTCATACAACTTGATGGCAAGTATTTGTCTCAAGAAGTCATTCTACAGTGAAGAATGGCTAGCCTCCTAGTACCAGTGTGTGCAGGGTGTAACATACCTGTTACCCATAGTCTTAGTGGCTAAGGACAATAGATGTTCTTAAAGCAAGCTATAGGTTAACTAGTGTCACAGTTTACAAAGAATTTTTATTAAAGGAGTCCTTTAGACATTAAACTACTCTAAGGTCACTAACAGATCAAGTCCAGTTATATAAACTTCATACATAATCACTGTGTGTAATGTTTTTTTCCCCAGAATTATGATGAGATACTAAACAACAGGCCTTTCTATAACAAGTTTGAAACTGTTTTGAACACAGAAGAAAGGCAGACAATCCATATATTATTTGGAGCAGGGTTTAGTAATATAGATAGTTTTTTCCCCCTGATTATACTAGTTGAGATATTGGAATGATATCAGGTGAATTGAGAGGTAAATGCACTTTGAAGATAGTCTGAAAAATGATGACCCTTATTCCTCACACTCAGATTAAAACAAAACAAAAAACAATGCACAGAGGCACAAAGTAGGCACATTTTCAGATACTTTTGTAGAGAATGATTGATAACCAAGAATCAGATTTATTGCACAGAATTGTTGATTTTTAAGAAAATATAAGGGCATCAGTACTTCATGTTGTGTTAGCGCTAATGAAATTTTCCATGAACATGAATTGCTGGATGCAGGGAAAATTAAAGCTGAGGTATATAGACTTACTGCCATTTGGAGAAAAAGTAAAATGCTTTTTTGAAATTAAGTTAGAGGGAAATAATTTGATACATACAACTTTTGAACTGAGGCATAATTGTAGCATTTTGTAGCATATGACTGAACTGCTCTACAAAGATATGCTAAGTGCTGATTAATAGGGATGGAAGTGTGTGGAGGGTGAGAAGGCTAAACCATGGGATGAGTTGAAATTTTGAGACAAATCTAAACTCTACTAAATTCTGTCATTGTAAACTATGCTGTTAGATTTTGTTAAATAAGAAAGCAGTCTTGGAAGCATTGTTTTCAGATCCATCCTGTTTCCAACTGCAAACATTGGTCTCAGCTGTCCCCCAGTGCCTTGCATGTAAAGGTGCTCAATAAATATTTGAATTGATGAGCAACTGTTTAGCCTGTTAGTTTTCTAGGATCTTATAATTGCACCTATTTGTATATTAAGCCTAGGGTAAATTTAAAAATCTGATCTAATTATGGTCGTGAAAACAGACAATTGTATACACCTTTCCTAGACATGTGGAATTTTAGAATCTGACAACCATGTATACATATTGAGGACATAGACAAGTGAATAAAACATGAAATAGCATATGAACAATGAAATATATGTGTAAGGGTCAGCTGCATTTTGGAGGGTGGGATAGCAATTATTTGAAGAAAAGGGAATAATGAGTTTATTCACTTTGGACCTGGGATGATGATTTTCTGAGCCTACAAGCCTATTTCCCAAATTGGTACTTAAAAGTCTACACGGTACATATCCTAGATAGTAAGGTAGGACTCAGTTGTGAAGAATTAAAAATACGTGATGTTGATCCTAGACTGGAAGTATCCAGATTCTAGACTTAAGTCTCTTCATTACACTGTTCTCAGTTGTTTTTTGCCAGATCATCTTAGACAATGAAAGCAGGAGCTTGTATTGTTTCTGTAACTTCAGCTTCAGATGGGAGTAATTTGGGGAACATTTTTCTGAAGAGGATAAACCAAATAGCTTTTGATAGGAAATGACCAATGACTTTCCTGGCCATGAGTGGTTAGGTAAGTGAGAAATGATCCAGATAGAATTAGGGACAGCTCTAATGGGTGGAGGTGAGATTTGCTCGGGAATGCAGCACACAAGTAAGGACACCAGGTGGCACCCTTTATCAGCAGTGCTTCATTGATCCTCCACGCCCCCCTGCCTGCCGCCATGGAGGCAAAATCAGACTAGCAAGGAGTGAAAGGAACCAGCCCCCAGTTTCATACAGTTATGGCTAATGACCTTGACCACCTCCTCCAAATTTGAAAATACCATTTTATATTTCATTACCTCTGCAATGCATGGTTGAAAGGAAGGAAAGGTCATTCCTCTGGTAGCTATTGCCAGTTGGTTTTCCAAGAGGTGACTTCCCTGATCTTTGCTTCTGGTAGCTATTGCCAGCTGGTCTTCCAAGAAGTGACGTTTATGTCAACTTGTTAGCTTTACAGTTCTCACACAAGTATATACCTGTTCTGTCACTTGGCAGTACAAGAGCCACTCACAGCAGTAAGTAGGTTTAAGAGTTTTTCCCTCTTGCTAACATGTCATCTCCCCCAGGGTTCCCCTTAAGTATCTGGATCAGATGGGAGACGTATCAGTGTACTCTTTCTCTGGAGCCCAACTGTTGGAATAGGTTAAGCTTTTTGTAAGGTAATTTCTCTAGCAACTAGGCGGAAAGGCACCTAGAAAACAAACTTAGGTTGAAACACGTATTAAATAATAGGCAAAGGTGTTTCTGTGCACACTCTGCCATCCCCCCAACTTCTCTCCCCCACCCGTTGAGCTAGAAAAACTTTTACTATTGAATCTGGTGCCAACAAGCTTGGCAGTGAAATCGCCAAAGTAACTGTATCAAGGAAAAGGGTTCGTGAGTGAGTTTTGACAGGAACATGGAAAATGGCTGGAGCAACTGGTTAACTGGATGAGAACGAGATGGAACATTGGAGGCTAAAGAAAACATGAAACAAATACGTCCCATCGGCACATTGACCCGATCGCACCCTTCCCGCCTAAAGCTCTCTCCTAGGCTATCAGCTTCTTCCGCCTTCTTCCACCGCGGCCAATCAGGTTGCTTAGTTCAATACACTCCGTAGCGATCGACTTATGAAGAATTATTTCCATGTAGGTCAACTCGCCCGGCAAGCGGCGAGCAGAAATTATTCTAGCCACTTTAAATCCCGGCGCTTGGAAGCAGACTTTATGGCTGTATCCAGTCCTGTAATTCTCAGCTAGGAGTTTCAGCTCGGTCCCTCGGGCCTATTAAAAGCCAACCATAGTGCCGCTGGGGGCGTGGTTACCGTCCTGTTAGGGTTCTGGGAAGTGCGCTTCTCTGGGGGACCAGGCCTGATAATACCATAAAAGGCTTGGTTTTCTCAGTTCTGAAGCCGTGTTCTGACGACCTCCCTCTAGGATCCGTAGTCGCGACTGCATTGTGCGGAATCCGTGGATCCCGGGTGCCCAGTCCTCGCTTCCTAGGCCCTTTCCTGGGCCCCGCCCCATAAGCCGTACTCGTCCACTCTGGGAACGCCCCCGTGCGTAGAGGCCGCGCCCCCTCGTCTCCGCTCCTCCTATCCAGCCGGTGGCTGAGCCCAGACGGTAGTTCGCGTTTTGAGCCGCTCGTGCCACCATAGCTGCTTCTGCCGCTGCCGCAGCGGAGCTGAAATCGCTGAGCGCGATGCCTGAGGGCGCTGCGAGCCGGGCGGCCCTCGCGCCCGGGGGCTGGTCAGTGAGAGGGCATACTGGAAGGGCCTGTGGAGTGGGAAAGCATTGCCGCTGTTGAGGCAAGTCCCAGGATTGGGCCAGGAGCTGTCCCCGGGGCTCCCCATCATGATGGCTGTGGAGGGGTCAACCATTACCAGCCGGATCAAGAACCTTCTGCGATCCCCGTCCATCAAATTACGCAGGAGTAAGGCAGGAAACCGGCGAGAAGACCTCAGCTCCAAGGTGACCTTGGAGAAGGTGCTTGGAATTACAGTGTCTGGAGGCAGAGGACTTGCCTGTGACCCCCGATCGGGTTTAGTTGCCTATCCAGCTGGGTGTGTGGTCGTGCTGTTCAATCCCCGGAAACACAAACAGCACCACATCCTCAACAGTTCCAGGAAAACCATCACTGCCCTTGCCTTCTCTCCTGATGGCAAGTACTTGGTCACTGGAGAGAGTGGGCACATGCCTGCCGTGCGCGTTTGGGATGTGGCAGAGCACAGCCAGGTGGCTGAGCTGCAGGAGCACAAGTATGGTGTGGCTTGTGTGGCCTTCTCCCCGAGCGCCAAGTACATCGTCTCTGTGGGCTACCAGCATGACATGATCGTCAACGTCTGGGCCTGGAAGAAAAACATCGTGGTGGCTTCCAATAAGGTGTCCAGTCGGGTCACCGCGGTGTCCTTCTCTGAAGACTGCAGCTACTTTGTCACTGCTGGTAACCGGCATATCAAATTCTGGTACCTTGATGACAGCAAGACCTCAAAGGTTAACGCCACTGTGCCCCTGCTGGGCCGCTCGGGGCTGCTGGGCGAGCTGCGGAACAACCTGTTCACTGACGTGGCCTGTGGCAGAGGGAAGAAGGCAGACAGCACCTTCTGCATCACGTCCTCAGGGCTGCTGTGCGAGTTCAGTGACCGGAGGCTTCTGGACAAGTGGGTGGAGCTGAGAACCACTGTGGCCCACTGCATCTCCGTGAGCCAGGACTACATCTTCTGTGGCTGCGCTGATGGCACCGTGCGCCTCTTCAACCCTTCCAACCTGCACTTCCTCAGCACCCTGCCCCGGCCCCACGCCCTGGGGACAGACATCGCCAGTGTCACAGAAGCCAGTCGCCTCTTCTCTGGCGCGGCTAATGCCAGATATCCAGACACCATCGCCTTGACCTTCGATCCTACTAATCAGTGGCTGTCTTGTGTGTACAACGACCACAGCATTTATGTTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGGTGTATTCGGCTCTGTATCATTCCTCCTGCGTCTGGAGTGTGGAGGTCTACCCTGAAGTGAAGGACAGTAACCAGGCCTGCCTGCCCCCCAGTTCCTTTATCACCTGTTCCTCCGACAACACTATCCGCCTGTGGAACACAGAGAGCTCCGGGGTGCATGGCTCCACGCTGCACCGGAACATCCTCAGCAATGACCTCATTAAGATCATCTATGTGGATGGGAACACTCAGGCCCTGCTGGACACTGAGCTGCCCGGGGGAGACAAAGCTGATGGGTCCCTGATGGATCCCCGCGTGGGCATTCGTTCTGTGTGTATCAGCCCCAATGGCCAGCATCTCGCTTCAGGAGACCGTGTGGGCACACTCAGGGTGCACGAACTGCAGTCCCTAAATGAGATGCTGAAGGTGGAGGCCCATGACTCGGAAATCCTGTGCCTGGAGTACTCTAAGCCAGACACAGGTCTGAAGCTCCTAGCGTCAGCGAGCCGGGACCGGCTGATCCACGTGTTGGATGCTGGACGGGAGTACAGCCTACAGCAGACATTGGACGAGCATTCATCCTCTATCACTGCTGTGAAGTTTGCAGCCAGCGATGGGCAAGTCCGCATGATCAGCTGTGGAGCAGACAAGAGCATCTACTTCCGCACTGCGCAGAAGTCTGGAGACGGAGTGCAGTTTACCCGGACACACCACGTGGTGCGGAAGACGACCCTCTATGACATGGACGTGGAGCCCAGTTGGAAGTACACAGCCATCGGCTGCCAGGATCGGAATATTCGGATCTTTAACATCAGCAGTGGGAAGCAGAAGAAGCTGTTTAAAGGGTCGCAGGGTGAGGACGGCACTCTGATTAAGGTGCAGACGGACCCCTCAGGGATCTACATCGCTACCAGCTGCTCTGACAAGAACCTCTCCATTTTTGACTTTTCCTCAGGCGAGTGCGTGGCTACCATGTTTGGCCACTCAGAGATTGTCACTGGCATGAAGTTTAGTAATGACTGCAAACACCTCATCTCTGTATCAGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCGGAGATGACCATCAGCATGAGGCAGCGTCTGGCTGAGCTGCGCCAGCGCCAGCGCGGAGGCAAGCAGCAAGGATCATCCTCTCCTCAGAGGGCCGCTGGACCCAACCGGCACGAGGCCCCCTCGATGCTATCTCCCGGACCAGCTCTCTCCTCAGACAGCGACAAGGAGGGAGAAGACGAGGGCACAGAAGAGGAGGAGCTCCCAGCGCTGCCTGTCCTTTCCAGGGGTGCCAAGAAAGAGCCAGCCTCAGTGCCCAGCCCAGCCCTGCCCCGAAGCCTGTCCCACTGGGAGATGAGTCGGGCACAGGAGACGGAGGAGTTCCTGGACCCAGCTCCTGCCACCAACCAAGGACCCAGAAGAAGGGGGCGCTGGGCTCAGCCCGGTGTGGAGCTGAGTGTTCGCTCTATGCTGGACCTGAGGCAGCTGGAAACACTGGCCCCAGGTCCTCGGGGTCCTCACCAGGACTCTCCGGCCATGACCCCTTCAGGTCCTGGGAAGCACAGTCAGCAGGCCCCTGAAACCTCAAGCGTGAGCAAGAATGAAAAGCTCCCCCGACCTCAGGCTTCCCAACCCTGTTCCTGCCCCCACATCATCCGATTGTTGTCCCAAGAGGAAGGGCTCTTTGCCCAAGATCTGGAGACTGCACCCATCGAAGATGGTATTGTCTACCCGGAGCCGGGTGACAGCCCCACCCTGGATACCAGTGAGTTCCAGGTGCAGGCACCAAGCCGAGGGACCCTGGGAAGAGTGTATGCAGACGGCAGGGGCTCAGAGAAGCATAGCCCTGATAGTGCATGCTCTGTGGACTTCAGCAGCAGCCGCCTTTCCAGCCCTGAGCACCCCAATGAAGACTCTGAGAGCACGGAGCCCCTGAGTGTGGATGGCATTTCCTCAGACCTTGAAGAGCCAGCCGAGGGTGATGAGGAGGAAGAGGAAGACGAGGGGGGCACTGGTCCCTATGAGGTGCAGGAGGGCAGCCCCCATACCCCGGACCAGGAGCAGTTTCTAAAACAGCACTTTGAGACTCTGGCCAATGGGGCTGCTCCAGGGGGCCCAGTTCGGGTACCAGAGCGGACAGAATCTCGGAGCATCTCTTCCCGATTCCTGTTGCAAGTGCAGAGCCCCCCACTCAGGGAACCGTCCCCATCTTCCTCAAGCCTGGCAGTGACGTCGAGACTGGCCCAGGGGCTGCAGGCTTCTGGTGAGCAGCCGAGAGGCAGTGGTGCCAATCCTCCAGGAGCACCCCCAGAGGCGGAGCCTTCCCCTGGAAACCCTGGCCCCCAGCAGACAGTTCCTGTGTTACTGCCGCGACGCCGTCTTAGCCCGGACAGTGGCTGGTCCCCCAAGAGAGTGGCGGCAGCCGGCCCCACAGGTGGACTCCAGAAAGCCCAGTCGGTGCAGAGTCTGGTACCACAGGATGAGGCCCCTCCACCAGGCCTGTTGCTCTCACAGGAGATGGAAGCCCAGGGGTGCCTGTGCCCCTTGCCCAAAGCTGATCGCCGTCTGTCTCGGCCCCACTCGTACCAGAGCCCCACCACCAGTTCCATGGCCAAGATTGCCCGCAGCATCTCTGTTGGGGAAAACCTGGGTCTGGCTGCTGAACATCAAGCTCCTGCCCCCGTCCGCATCTCACCACTCAACAAGCTGGCCCTGCCCAGCCGGGCTCACCTGGTCCTGGATATCCCGAAGCCACTGCCTGATCGTCCCACCTTGGCCACCTTCTCACCTGCTACCAAGGGCCGGGCCCCTGGTGAGGCAGAACAGCCTGGCTGCCCAGTGGGGCTAGGAAAGACTCACAGTACAGCTGAGAGGCGGGCCTGTTCAGGGGAGGGTGCCACTCCCAAGCCTAGGACAGAGTGCCAGGCTCAGCCTGGCCCCAACAGCCCCTGTGCCCAGCAGCTGCCGGCCAGCAGCCTCCTCCGAGGCCCTGCAAACTTGCAGCCACCACCCCTTGAGAAGACTCCCAGCCCTGTGGAATGTGCCAGGCCAGGGGCAGCCCTGAGCCGGGACTCAGAACCAGCAGTGAGCCTGGAGCAGTGCGAGCAGCTCGTGGCTGAGCTCCAGGGCAGTGTGCGCCAGGCCGTGCAGCTCTACCACTTGGTGGCCAGCTGCAAGACACCCTCGGTGGAACAAAGTCGCATCACCCAGCTCCTCAGAAGCACCTTCTCTTCAGTGCGGCAGGAGCTGGAGGCCCTGGCTGGGGCAGTGTTGGCCAGCCCTGGCGGGAGCCCTGGGGCTGTGGGGGCCGAGCAGACACAGGCCCTGCTGGAGCAATACTCAGAGCTGCTGCTTCGAGCTGTGGAGCGGCGCATGGAACGCAGACTCTGAGTTCCAGAAGCCTGTCCCCAGTGAATGCTCCCCCCCTTCCAAACTGCATCTCTCCTCCACTCACCAAAACCTGCAAGGATGCTTGGAGTGGAGAGCAGGGATCCATGCTCAGAGGGGCCATGGCTTTCGCAGCTGTTCCTCACAGGACCCCTGTATTTATTAATTTATTTCCCTGACTGTTGCCTCACTCTCTTGGAACTCCTGCCTCCACAGCCATCTGGTGGCTCACACAGGGGCAGATCTTGGTCTTTGTCATCTTGGTGCTGTGAGGAGTCGGAGGGCAGCCTGCCCCACCTGGGGCAAGTCCAGAAAGGCCTGCCCTCCCTTCTTAGAAGCCATTTGAAATTACTGCAGGGATCAGCTCCCTGGGGTGGAGCACACACAGGGTATCCAAGGGGTAGAGGTGAGAGGTGATCTGGTGTCCTTGCCCTCTGGCCAATGGTGGAACTTCACCTCTACCTCCATGCCCCCTCCCACACCAGCTTACTCCCTTGGTTGCCAGAGTGGGGGTTGTCTGTTTTCCCCACTTGCTGGCAGTTCAGAAAGGCAGAGCCCTCTGGCCCTCTGGAGCTCTCCCAGCCATCAGGAGGCTTGAGTTGGTGTCAAGGCCTGAGCCCCCACATTCCACTCCCATTCCCCCCTCCAGGGGGGCCCTAGCATTGTCTCTTCCTGTGCCCCCTTTCTCTCCTGGCTGGAACTTGTGGAGCCAGCTGTGGGATGTTGCTGCAGGACAGTAAAGCCCTCTGCTGGGCAAACATCAAGCCCTGGCCTCCTTTCCTCAGCCCCTTGGCCTTCCCTGTTCTTCAGCCCTGGTCCCCAACAGGCTGCTGAAGTCGAGGCCACCTTCTCTCTGCATCCTGAGTGATGCTCAGTCAGAAGCCTGTGTTGGAACTTCCCTCGTAGTTTACAGGGCGCCGGCCCACCTTCTAAGGACCTTGGCCACAGAAGAAACCTACACAAATGCATACATGCACACACACACGCGCGCGCGCACACACACACACACACACACGCGCGCGCGCGCGCGCGCGCACACACACACACACACACACACACACTTGAGTGCTCACCACTAGACCACTCGGCTGGCTGATGTGTGCCTGCTTTCTTTTCACATCCTGCCCTGGCTTCATCACCCTGGCTCCTATTAAGAATATGAAAAGGGATGGAATACACTAAGCCTGGATTCTGGATTCTTGGTTTTTACAGCCTAGCTGATGTGTAATGGCCCAGGGTATCTGTTTTGGGTAGAAGGAGCCTCCTCAAGGGCAATGCTGGGCACCAGGTGTGCTGGATGCTGGAGGCTGAAGAGAGGGAGGCCTATGGGGCTGCAGCAGGGGCCAAGAGACACACTGGAAAGGTGGTAGGTGGGCCAGGTAAGTGGTAGAGGTGAGGGGATAGAGTTGGGAGGGTAGTGTTAGGGGTGAGGGGAAGGAGCCAGGGCACAATGGGCAAGTAGAGTAGGACCAAGTACAGAAGCAGCTGTGGAAGAGTTGGGGTGAAGAACGTGTCTCTCGGCCCTGCTGCTTCCTCTGCCTCAGGTAAGTCAGGGCAGCTCTGCTTCAGCTCCAGGCTGGAAAGCTGTGTCCCTATGGGTTCTGCTGGCTCTCTGGGTGGAGGCTTGAAGTTGGATTCTCAAGGGTGCCCAGCTCTGCTTGCATTAGTCACCTGAACAGGTGAACCCTATTTCACCCTCACTGTTCTCTACTGCTACCACCTGCATGGCCAAGCTGCCAAGAAATCCTGGCCCAGGAACTCTCAGAGCTGAGTGTGGACCCCAAGAAGCCGCAGCTGTCCTTGTCATTGTTAGAAATCCGCTCCCTATGTTCCCCTGACCAGCACACCAGCTGCAGTCCACTGCAAGTGGGGCTCAGGCCTGGCCCTCTGGGCTGGGTTCCTGGCCACCCTCAGCCAGTCTGTCCCTCACGAGGACGGAGCGACACTCCTCCTGTGGGAAGGTAGCCACCCTTTTGATTACCAACCCCCAACCCCTACCCCCGCCCAATGTGGGGGGATGTTGTGGTCGGCGTCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAATGCCGCCCCCGTTCAGATCTGCCCTGACCCAGTTTTGAAAGCCCCTTATTTATAACTTTTATACTTTGCCCAGGCCATGGCGCTTCCCCTACACCCCAGGTCTCACAGGGCAGAGGCTGTTTTTAACATGTCCGTTTGTATTGATGTATGAACTCATCAATAAACACAATCATTTGCTAACT EMBV3_07442 CTTCCAGCTGCTCTGCACTGCCTTTATGATCAGCTATGGACCACCTTCATGGAACTACTC Gene BVV0102_055324 + 0 NULL GK000007.2:29648901-30346722 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212700 TCONS_00212697 TCONS_00212701 TCONS_00212699 TCONS_00212698 TCONS_00212695 TCONS_00212696 1 XLOC_130243 NonCoding TCONS_00212696 XLOC_130243 NonCoding NonCoding - 7:29777062-29798472 - TSS159532 1025 1 TCONS_00212696_2 51 0.131707317073171 3 0.952263066934467 0.00205513204989258 0.00199413993948033 0.0028725167216374 0.00152265889207426 0.000314520667530112 0.000664493056891089 0.000509366894241722 0.000379227404738762 0.000299012742292274 1.37439320317625e-20 2.65265053003074e-15 0 2.21703299912528e-65 2.59229786604278e-05 0.000170448354941757 0 0 0 0.00593188587569469 0.00731020312555422 0.0013004837730319 0.000224429982170333 0 0 0.00714924716283415 0.00681571147055642 0.00399504724229183 2.05848970205894e-10 7.87676622152563e-23 1.69860965718477e-14 XR_231669.1 LOC101904702 PREDICTED: Bos taurus uncharacterized LOC101904702 (LOC101904702), 2e-72 277 100.00 0.148292682926829 0 noncoding 0 0 0 0 -2.0663491673615 0.00180784220211162 -0.0229709809526781 0.636818460628094 ATCAGATACTCCCAGCTGTTCACATTGCCTCTGTTTGATGGTCATTCTGGGACCTGCCTGATGTTGAGAAGCGTGTTATTAGAGAAGTAAATCCCTTGCTGAAGATTGATCAAGGAGGGATGTAAGCTCGGGGGTGCTGGAGTTGGTTCATAAAGTCGAGGACAGAGATGTGTACTGGCAATTACAGAAGGTGAATTTATTTAAGACTCTTAATCAGAGCTTTTAGGGGTCTGTTATTGCTTTGGTGTAAATTATGCTTTGAACTCATTCCTGTAGTCAGGTTCTTTTAGGGCCCCTCAAATAGATAAACCATTCCTCTCCTGTGGGAAGTAAAAGCAGGCAGATGCCTTGCTACTATATAGATAAGGAAAAAGAGCCATTGAAATGCCAAGAGCAGCCTCTTAATCAAGCCCCTGGTTACTAAGGCCAGGTGCCATGTATTTAAAAGAGAAAGGGAACTGTGTCCATGCTGAGGATCCTTAGTTTGCCTCGCTCAGATCCTCGCTCAGCCCTTCCCACCATGCTCTGTGCTCAGGCAGCTTCTCAGGATTCCTGAGCCCTCTGGCTTCCCCTTGAGCTCAGCCCATGGTGCCCCTGCAGGAGGCTCCAGGAAGCACTTGTATATTTTCTGGAGTGACCCAGCAAAGCCAAATGGTTCAGAATCTTCAGGAAACTCTCACTGGTTAGAGGAACTTCCAGCTGCTCTGCACTGCCTTTATGATCAGCTATGGACCACCTTCATGGAACTACTCAAGGTCTCCACAGGACTGCTAAAGTCCCTGCAATCTGGAGCTTGTGAAGCTCTGAGTGACCAAGGAATAGCTGTATATCACACCCAGGGCTTTCACATCAAAGTACTCAGTGGAGACTTCATCCTGCTCAAAATGACAAATTAAAACGAATCCCAGAGCTTTATTCTTAAAGAACATAAGACATGTTTTCTTTTTGAACATTTCATTGCACTGTCTTCAGAATCAAGCTCTCTAAAGAACATTATTATACCTTGAGATTCTTGACACATTTCC TCONS_00212688 s 3' 317377 TCONS_00212688 s 3' 317377 EMBV3_01862 CGGTCCTCCGTTTGCTGAAGACCCCTCCCAGTGGCCAAACAGGCTGTGAAGAGACTTTCA Variant GeneID:509797|TIMM17A:XM_002694116:448_cdna 633^787 4 EMBV3_42793 GeneID:509797 16 GENE TIMM17A NULL translocase of inner mitochondrial membrane 17 homolog A (yeast) EMBV3_17968 CCCGAAGGCTCTCCGTCGAAGGCAACATTGGTTTGTTTAAAGAGACTACAGCGGAGGGCC Variant GeneID:509834|DGUOK:NM_001014888:5_cdna 174^622 3 EMBV3_01873 GeneID:509834 11 GENE DGUOK MGC137088 deoxyguanosine kinase EMBV3_02339 AGACGAACAGCCGGTACTATTAGACGTTGTGGCTGTTGTTGTTGTACTCCAGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_30965 CTTTAGAGCACTTGGGCTTCAGTAGTTGCAGAGTGTGGTGTTGGTAGTTGTGGCTCATGG Gene BVV0102_339671 - 1 EMBV3_32536 GK000003.2:16515183-16519219 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42685 GGTTCAGAATGCCATCTGCAGCTTCATCCCTTGAATGTTACCGGCTCTAGGAGCAAATAG Gene BVT0102_119930 + 0 NULL GK000007.2:88650683-88994988 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07196 TGGGATAATCCACCCAGTGGGCACTGCCTGCGCCCATCACAGTCTCCACAGAGGCCATCA Gene BVT0102_185270 + 1 EMBV3_03571 GK000019.2:35943736-35955795 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33927 ACCTGCAGCTACCCCAAGAGGATGAGGAGGGCATGCAGATAGAGCAAGTAATGACCGATT Gene GeneID:507830|GPR108:NM_001075333:36_cdna Constitutive 0 NULL GeneID:507830 7 GENE GPR108 NULL G protein-coupled receptor 108 EMBV3_21259 CGGATTCAGACTTGACCCATCTGTCCCAATGTCCAAACATCAGTCAGCTAAAGAGCCTGG Gene GeneID:517884|LOC517884:XM_002694084:327_cdna Constitutive 1 NULL GeneID:517884 16 GENE LOC517884 NULL similar to preferentially expressed antigen in melanoma EMBV3_20026 TTCGCCACCGCTATGTGGGAAGCGAATCCGTTACATCTGTGAGAACGAGGCCATCCCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40510 AATTTTCTCCTTGTGTCCTCGATCTCCGCCCCTTCACACCTGCCAAGTAACAAGATGACG Gene GeneID:100140583|SEPT9:XM_002696201:234_cdna Constitutive 0 NULL GeneID:100140583 19 GENE SEPT9 NULL septin 9 EMBV3_39218 GGCAGAAATCTCTCTAACTGAAGCTGCCCGCCCACTCATTTTATAGTCACTTCCTTCCCC Gene BVV0102_083879 + 0 NULL GK000021.2:61555943-61618759 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125076 1 XLOC_076618 NonCoding TCONS_00125076 XLOC_076618 NonCoding NonCoding - 21:61610309-61613170 - TSS93835 2861 5 TCONS_00125076_1 89 0.164278224397064 1 0 2.37778612805749e-05 0 9.70359232364002e-06 0 0 0 0 0 2.20625643031748e-05 1.43813129871132e-06 8.00132953300358e-07 0 0 0 0 0.00115394819123743 0 5.26198700300892e-05 0 0 0 0.000147842688339797 0.000660556341566826 0.000505399713769244 2.42170097620312e-05 4.92517921781937e-06 5.52943736561205e-05 0.000107432911507968 2.37555023070279e-05 0 XM_002696763.2 CLMN PREDICTED: Bos taurus calmin (calponin-like, transmembrane) (CLMN), 0.0 5160 100.00 0.999650471862985 0 noncoding 0 0 0 0 -0.287228107448427 0.185807593112806 -0.0125623062565708 0.887355682448038 GCTAGGACATGCGTTCCTAACAGCCAGGCCAGTGCTGTCCCAATCTGGAACACTGTCAACTCTCTAGGTTACAGACACTCTTAAGAGTTTCCTTTTAAAAAGTGTTTCAACCAGGCATGTTGTGGCTATCCTCACAGCAAAGTCCACTGACTTCTGGTGGGGCTAAGAGAAGTGGGAACTATCGCAAATGGGAGGAAAAAAAAAAAAAAACCCTATCAAAAGATACTTTTCTATTTGTTTTTGCAACAATGCAAAACCTACAACTTTTTAAAGGCAGAACAAAGCGGGAAAATGGTGATTCCTATCTCACAGACCAACCTGTTGTCTTACTCCCAGGAATTCATGTTCTCATTCTTATTTTAATCGTGTTCTGCCCAGGACAATGAAATTTGCTTTTCAAAGGAGGGGGCCTCTCTTCCACTCTGAAAAGCATATTAGAAGAACTGAGTGAAGAGCTGGGGGCGGTTAATTAAAGTCACTCACTCCTGAATGTTAAGACACTGAATTTATGCTGCTGAAGGCCCTTTAAAAGCAGTCATTTTAGTTATAAATTTGCAACCTTAGGGTAAAACTTGAATTTGGGGTGTCCTCAGGTATTAAAATTTTTTAAACTTATTTTTAATTGAAGCATAATTGATGTACAATGTTACTCAGTCACTTTTACAAACTGAGGATGAAGGAAATATTTAAGCAGTGTTGATGTGGAAAGTGAAAGTGTTAGTCACTCAATTGTGTCCAGCTCTTGGCAACCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGACTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCTGACCCAGGGACAGAATCTGGGTCTCCCACATTGCAGGTGGATTCTTTACCACCGAATCACCAAGGAAGGGTCAAAGTGTGCAGAAACCTAGAAAGGGGAAGAACACAAGGTGGGGGTTACAAGTGACAGATAAAGTTCACCACCTGCCCAGCTCTGAGGTCCTCACCCACTCTTGCCAACTAGACTGAAGTCAGTAAGAATCAGAATCACCTTGGCGCAAAGCTTATTTTCTAAGCAGTGAAGTCCTGGGTGGAAATCAACGTTTCGAAGGAAGTCCCATATTTGCGGTTCTGCCACCTGCCAGCTCTATGATCTTATTATTTTTCCTTCTTGTGTTTTAGCTTCCTCTGAAGCTAAAAGCACCACCTCCTGTGGTGAAAGAACCACCTCCTGTGATTGTTAAGGGTCCAGTGAGTTCATGGGTAGACTTCCTCTTATAAAAGGTATGAGTTAGGTTTGAGACAGAGCAGCTGGCAAGAGGGAGGTGGGTTGGAAAGAAGCTGGGAAAAGCTATGGTAACTGAATATAACAAAAGGAGGTCTAGTCAAAGCTTGGCGAGGAGGGACAGGCAGGCAAGGAGCTGCTGAGTAGCATACAATGTTGTAACGAGCTCACAAGGAAGCTATTAATATTTTTGGCTGCACGTGGAACTTTCCCAACCAAGACTCGAACCTGTGTCTCCTGCAGTGGAAGCATGGAGTCTTAACCACTAGACCACTGGGCAAGTCCACAAGGAAACTATCATTCACTCAACAAACATGTACTGAGTATCTACTCTGCACAGAAGATGGTCAGAGAGGTTATTTGCCCAAGGTCATCCAGGTATCTGGAGACAGAGCTGGAACTGGAACCTAAATCTAGCTGATTTCCAAACCTGCCCTCCTCCCCATCCCATAAAACCTCCTGGGGAAGGAAGTGACTATAAAATGAGTGGGCGGGCAGCTTCAGTTAGAGAGATTTCTGCCAGATGAAAGCTGGCCTTGACATCTAAGTGTCAGGGATTTTAAAGTTACCAGTGGGATCAGGGCCAGACTGTTGTGTATTTAACACCATGTGGTCAAACAGCCTGAAACACTGGCTGTCTTCTTCCCACAGAGGAGGATGCTTTTTGGCTTGTTGGTATTATAGCCCTGGGCTAGAGGTGACTGCTTGTCAGATGGGTTTTCATCAAGGTTCTCAGAACAAATTATAAACATCTAAGTTGATCTTCCCTGTGCAGGAGGACTTGGCAATTCCAGAAAAATCAGAGGGGTTCCAGAACTCTGATGATCTCTGCTGACCCTTGGGAAGTAGGGGCTCAGAGTCTCCAGGCCTTTGCCCCTTCCCAAGATGGCAGAGCCCACGAGAGTGGAGGACGGTGAAGACCTGCGGGTCACTGTGGAGCTGTCATGCATTAGAGAACGGAGGGCCAGGGCTCACCTGGAGCCTGAGGCCACAGCATCTGCATGCTCGCCATGGAAATGGAAAATTCTGGATGCAAAACAGAGTCCCGGCTCTGCTTGCATCAGGTTCACTTCCCTTGGCTGACTGTTTTTCCTCAACGAGATGCCCAACAAGAGACAGCGCAAAAAGAGATCCATGGGATTTCATGTCCAGCAAAGAAGCCACATCTCATTTCTTGGCTCCCTGACGCTGGCTAACCGTTAAGGCAAACTCTGCAGCCATTTCCAGCAAATGAGCATGTTATCACTCATGCTGGCTTTCAGCCTTCAGCTGCTCAGCCCAGGTCCTGGCCCTCGTCCTGAGCGCAGCCCCACTCAGCAGCTGGATGGACCGGATGAAGAGCCAGCCGTTCAGTGGGGGCTCAGGACGGCAGCTGTGGCCCCAGGCACTGAATCTGCCCCCAAAGGTGGTTTCAGCAGAGATGATGCAATGTCGGGGCGAGAGAAATAACACCTCTGGACCCAAAGGGCATCACGGGCTCTTGTTTTCTGGCCAGAGCATCACCGAGAAGGTTCTGAAGAGCCATGCTGCCTTGAAACTTGCACACAGCCCACCTCGGGGACTTCAGGAC TCONS_00121813 TCONS_00121812 TCONS_00121814 . 3' 5590 TCONS_00121813 TCONS_00121812 TCONS_00121814 . 3' 8450 EMBV3_04116 TCCACGCTGGACACGGATTACCAGATGACCAAGAATGAAATGGGCTTCACCGAAGAGGAG Gene GeneID:280712|ADA:NM_173887:689_cdna Constitutive 0 NULL GeneID:280712 13 GENE ADA NULL adenosine deaminase EMBV3_20531 CTTTCCACACCACTGTTTACAAAGAGGTCACTAAGTACAACCCACACTTATTGGTGAGGA Gene BVV0102_201932 + 0 NULL GK000021.2:53734473-54197009 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119713 TCONS_00119715 TCONS_00119718 TCONS_00119720 TCONS_00119719 1 XLOC_072952 NonCoding TCONS_00119713 XLOC_072952 NonCoding NonCoding - 21:53900074-54076823 - TSS89578 3044 1 TCONS_00119713_5 104 0.958278580814718 4 0.982800371149886 3.32369693592923e-10 8.75431542681434e-05 7.71409474486722e-05 0.000239272306097434 0.000353981083183279 0.000237835817806603 0.000375816190741085 0.00031695437643247 0.000113284289472666 2.0190634817821e-05 3.3794868219633e-05 2.56316000349119e-06 0.000157608719904272 0.000202936950096802 7.62309534170377e-05 0 0 0 0.00015370686525899 0.000136765451768181 1.66620492647031e-06 0 0 0 0.000285974915769181 0.000212542745024894 0.000170541137402361 6.10308986078203e-06 1.58459780635334e-05 1.94995131825756e-26 XM_005204165.1 KCND3 PREDICTED: Bos taurus potassium voltage-gated channel, Shal-related subfamily, member 3 (KCND3), transcript variant X1, mRNA. 4e-69 268 89.27 0.0670170827858081 0 noncoding 0 0 0 0 -0.176347030975573 0.753963673904617 -0.0480258474823958 0.351900944750951 CTTTCTCCTGGGGACACATCTTGTTAAGGACAGCATATTCTGGAAAACTTGAAAATGGTTCCTTTTTCCAGCAGAAGCTGAAAGTGTGAGGGAAGTTCTCTCATTATTCGTTGTGAGAACCTGCTAAAACTCCAAGAGGTCAAACTCCAACTATGCTTTGGACCCTCTGGAGTTTTTAATTCTCAGAGTTGTTCACATTGAGCCTCCAGAAATTCATCAATGGCAGTTCAGGTAGCTGTACGTCAGCGCTAGCTTTCCATTAACATTTCAGCTTATGGATTTCTGCTCAGGGGAAATAGTTTCCTATTGCACTTAACCTAGCTGGGACGCCGCTTCAGAAAATTTCCCTGGAAACTTCCTTTCATAGTTCCAGTATGGACTCTGAAGTTGAATTCCTCAAGCTCAGATCCTGATCTTCACTTCGTTTTGCGATTTTGATGCAGTTTACCGAATTGGTCAATTTTACCATAAGCAATGTTCTACTCATATGAAGTTTCCAGGAAAAAAAGAAATAGAAAATTGACTGAAGATTTCCTCTGGGATTTGTCTTTGTTTTTTTTTGGAATGGGGTTATGTGTTTTTGGATGAACGATCACTGCCATTTCACTACAGCATATCAAGTATACAGAGCATCAGAATGACTTAACCCTCCAAGTGTTGACCTTAATCTCTTCATTGGAGTAGTATTTGTCAGATTTCCACACCTAACATTTCTTTTTTTCTCCCTTTCCACACCACTGTTTACAAAGAGGTCACTAAGTACAACCCACACTTATTGGTGAGGAGTTATGCTACACTTACTTGGAGGAAGAATATCTACACAAATTGTGGAAATTCTTCTACATAGGGAATTTTTCTTTTCTCAGCCAATTATCCATTTTAGAAGAATGTATTTATATCAATATGTACTCATGGGTATTTATTTTATAGTCCTATTTCTAATCCAGTACTACTCTATTTAGTGCTCACATTGTTCACTACTGGTATACGGGAAAACAATTGACTTTATATATATTATCCTTGTATCCTACAACCTTTCAGTATTCAGTAAGTAGTTTCAAGAAGTTTTGAGGCTTTGGCATTTCCTTCATAGATAATTATATTGTGTATGAATAAAAATAGCTTTATTGGATCCCCTCAAATTCATGTAATCCTTTTATTTTTTCTCATCTTCCTTTCAATAAGATATTGAGTAAAGGTGTTGAAAGATAACCTTGTTTTGTGGCAAATCTTAAGGGGGAAATGTCCAGTTTTTCACTATTGAGTACTTTTTAGTTATGAGGAAGTTCCTCTTCATTTTTTACTAGTTTATAGTTTTTATTATGAATGTGTGTTGAATTTTGTCAAATGTTTTTTCCACATCTATTACTATATGACTTTTTCCTTTAGTCTGTTCATTTCTCAGATTATATTTTTTGATTTTTAAACTTTGAACCAGGCTTGTAAAACTGGAATCAATTGCATTTTATCTTTGTATAATTTTTATATATTTCTGAATTTGACATGCTGATATTTTATTGAGGTTATTTGTATCTATATTCATGAGAAACATTTGCCTAATTTTCCTTTCTTGTAGTATGTTTTACTTTCTTGTAATTAGGTTTAGTTTATTTTATCTCTTTGTTTTCTTAAAATATATCCTGAGATTGTTGATTTTAGATCTTTTTTCTTCTCTTATATATGTATTTAATGTTGTAATTTTCTCAGCAGCAATTTCACTGCATCCCACAAACTTAGGTACGTAATATATTCATTTAGTTCAAAATATTTCTAATTTCTCTTGAGACTTTGATTCATGTGCTATTTAGAAGTATGTTGTTAAATTTCCAAATATTGGGAGATTTTGAGCATTGTTCCTTTCCCTTACTGATTTAATGATACCTTCAGACATAATTTATATATGATTTCAATTTTGTTCAATATGTTAAGATGTGTTTTGGTGAATGTTCATGGGAACTTGAGAAGAAGGTTTATTCTGCTGTTGTTGGATGGAGTATTCTATAAATATCAGATCAAGTTGACTGAATGTGCTATTTAGATCAATTCTATCCTTCCTAGCTTTCTGCCTGCTTATCTATCATTTACCAAAAGAGAAGGGTTGAAATCTCAATTATAATAGTAGATATGTCAATTTCTTTCCACAGTTCTTTCAGTTTTTGTCTCCTAATTTTGATACTCTGTGGTTAGGTGCATAAATATTACAATCTGGTTGAGGTATCTAGAGAATTATCATTATGAAATCTTTCTCCCCAATGCTGATTATTTTTTATTGTTCTGAAATTGACTTCGCCTATAATTAATATAATTACTCTTCTTCTTTATTAACATTAGCTCAGTATATATCTATCCCTTAACTCTTTAAAAACTCATAAACTATTTTTTTTTAGTTTTAGCAGTTTTAGGATCACAATGATATTGAATGGAAAGTACAGAGAATTTCCATATACCCCTTGTACCATACATGCCCACTCTCTCTCACTACTGACATTCCTATGTGTTACCATTGATAGATCTATACTGACACATCCTTATCATCCAGGGTCCATTGGTTACACTGGAGTTCACTCTTGTTTTTGTACATTCCATCAGTTTGGATACGCATGTATCCAGCACTGTAGTATCACACAAAATAGTTTCCACACACCAACATATATCATACCCTGTCTATTCCTCTCTCCCATCTCCCAACTCCCAGAAACCACTAATATTTTACTGTCTCCATAGGGCTTCCTCTTCAGGAATTTATAGAGTTGGAATCATACAGTCGTAATCTTTTCAAATTGGCTTCTTTCATTAATAATATGTATTTGTATATTTTTCCTATCTTTACATGAGCTTCCCTGGTGGCTCAGATGGTAAAAGCATCTGCTTGCAATGCAGGAGACCTGGGTTCGATCCCTTGGTGAGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGCACTCTTGCCTGGAAAATTCCATGGATGGAGAAGCCTCGTAGGCTACAGTCCATGGGATCCCAAAGAGTTGGACACGAGTAAGCGATTTCACTTTCACT TCONS_00121521 r 3' 22859 TCONS_00121521 r 3' 199607 EMBV3_05362 TAGGGCTGGGTGCATAGCATTTTACCAAACCTCTCAAGTCAGGCCAAGAACCAACCTAGC Gene BVV0102_448658 + 0 NULL GK000019.2:49120196-49176641 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38492 GCTCATGCAGCTCAATATCAAAAGCAAATGACCCAATGAAAAAATGGGTGGAAGATGTGA Gene BVV0102_320096 + 0 NULL GK000003.2:14178241-14207021 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28411 AGCTTGACTCTGAACTAGGAGAGAGGGCCTCAGAACTGTTAATTCTCAGCTGCTTTAAAC Gene GeneID:510953|PON3:NM_001075479:33_cdna Constitutive 0 NULL GeneID:510953 4 GENE PON3 MGC139085 paraoxonase 3 EMBV3_21205 CAGGACTGCCGCTCTGGCCAGTGACCAGCGGGGCTGTGCAGATGCTCTCAACCACGCTTA Variant GeneID:527591|LOC527591:XM_002694127:480_cdna 397^802 1 EMBV3_16728 GeneID:527591 16 GENE LOC527591 NULL similar to solute carrier family 35, member E2 EMBV3_16668 TCTGAGAACTTTTCCTAGCCTTCCTGGAGATGGCTACATCCCTACTAATATAATATTTTT Gene GeneID:538697|STARD13:XM_002691805:451_cdna Constitutive 2 NULL GeneID:538697 12 GENE STARD13 NULL StAR-related lipid transfer (START) domain containing 13 EMBV3_31458 GATATTCAACTGTTCGGCCAAGCATTCAGCTGTCAGTGCAGGGCAGTTTGACTTTGCTGC Gene GeneID:286820|ALOX15B:XM_002695854:314_cdna Constitutive 0 NULL GeneID:286820 19 GENE ALOX15B NULL arachidonate 15-lipoxygenase, type B EMBV3_07406 AGCACCCCCGACTACGGCGAGAAGAAGCTGCCCCAGGCGCTGATCATCGGGGTCAAGAAA Gene GeneID:782286|LOC782286:XM_002698041:2_cdna Constitutive 0 NULL GeneID:782286 25 GENE LOC782286 NULL similar to Heparan sulfate glucosamine 3-O-sulfotransferase 4 (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4) (Heparan sulfate 3-O-sulfotransferase 4) (h3-OST-4) EMBV3_09475 TGCTGCTCCGGGCTCAGGACCAGGCGTAAGGCCGGCTGGGCTGAGACCTACTAGGCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39591 GACGTCTGTTGTACGTGCTGAGCCCCAGAGTCGAAGACTTTCCAACGCTTTTCTCTTCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02677 ATACGGAACTCTTGCGCCTAAATTGACCTATTGGAGGGAGGAACTGGACTCCCTCAGGAA Gene GeneID:511077|MYC:NM_001046074:17_cdna Constitutive 0 NULL GeneID:511077 14 GENE MYC CMYC MGC138120 v-myc myelocytomatosis viral oncogene homolog (avian) EMBV3_19478 CTAGCTCCTCTGTTCTCACCAAAGGGTGCTCCTCCCCAAGAGTAGACTGGACAGTTCATT Gene GeneID:783570|LOC783570:XM_002698731:190_cdna Constitutive 0 NULL GeneID:783570 27 GENE LOC783570 NULL similar to NEFA-interacting nuclear protein NIP30 EMBV3_18486 GAGGAGCACTTCATTACCTGAATAAAACTTTGCAGCGTCCTCTGCTTTCTGGGCACAGGG Gene BVT0102_190055 + 0 NULL GK000002.2:128103313-128137416 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20917 CAGAGTTGATTGACACTAACACCAGTTCCCAAAGAGACAAAGAAACAGAGGAGCCTGCTG Gene BVT0102_222394 + 0 NULL GK000003.2:103723966-103893732 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19463 CCTGGGATAGTCCTGATTTATGTCCTGGTATAATGGCTAGCAGAGCCTTCTTTTGCTTCT Gene BVT0102_087418 - 0 NULL GK000019.2:9892159-10123662 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092142 TCONS_00092147 TCONS_00092139 TCONS_00092146 TCONS_00092137 1 XLOC_056832 Coding TCONS_00092137 XLOC_056832 Coding Coding RAD51C 19:9888481-9920847 j TSS69433 2892 1 TCONS_00092137_2 245 0.051521438450899 9 0.910922292600031 0.00159985730413652 0.00188311152622176 0.000973746615293897 0.000977345080990577 0.000643478186227617 0.00130198405868596 0.00182027364654927 0.00106716997684449 0.00427903524835935 0.000214491894479657 3.61624091657202e-05 0.000133476507327206 1.16479330512657e-09 3.31976207783599e-28 0.00092737398471715 0.000773362441230199 0.000966223881530269 0.00019149590953669 0.000982940589213937 0.0014529715769615 0.000650077309298915 3.25962637234415e-08 0.000134300471357584 0.000922887353248477 0.0014497058489347 1.01552740773539e-09 0.000171100759912485 5.47229575102979e-14 2.81028210215289e-07 0.000416823508774821 XM_613584.6 RAD51C PREDICTED: Bos taurus RAD51 paralog C (RAD51C), transcript variant 0.0 4549 100.00 0.871715076071923 NM_058216.2 RAD51C Homo sapiens RAD51 paralog C (RAD51C), transcript variant 1, mRNA. 0.0 1440 89.12 0.379322268326418 TCONS_00092137_2 sp|O43502|RA51C_HUMAN RA51C_HUMAN DNA repair protein RAD51 homolog 3; 2e-159 452 90.42 0.975510204081633 1 coding 0 0 0 0 1.01494768172601 0.0432079108146977 -0.0750248273178453 0.195844901742456 GAGGGCGAGGGCGAGGGCGGGAAAGGTGAGGGGCCTAGCAACGGGGGACAGCCGCAAGAAGAGCCAAAACTATTCGACTGTTCCAGACTCCAAACCGAAGTTGGAATATCTAAAGAGGAAGCCTTAGAAACTCTGCAAATTATAAGAAGAGAATGTCTTACAAATAAAACAAGTTATTCTGTTACAGCTGAGTCAGGCAGGAAGTGTACAGCCCTGGAACTTCTTGAACAGGAGCATACCCAGAACTTCATAATTACCTTCTGTTCAGCACTGGATAATATTCTTGGGGGTGGAATACCCTTAACCAAAACAACAGAAATTTGTGGTGCACCAGGTGTTGGAAAAACACAACTATGTATGCAGCTGGCAATAGATGTGCAGATACCAGAATGTTTTGGAGGAGTGGAAGGTGAAGCAGTTTTTATTGATACAGAGGGGAGTTTTATGGTTGATAGAGTGGTAGACCTTGCTACTGCCTGCATTCAGCACCTGCAGCTTATAGCAGGAACACATATGGAAGAAGAGCACCCAAAGGCTTTGCAGGATTTCACTCTTGAAAATATTCTTTCCCATATTTATTATTTTCGTTGTCGTGACTACACAGAACTACTGGCACAAGTTTATCTGCTTTCAGACTTCCTTTCAGAACACTCAAAGGTTCGATTAGTGATAGTGGATGGTATCGCTTTTCCTTTTCGTCATGACCTAGATGACCTGTCCCTTCGTACTCGATTATTAAATGGCCTAGCCCAGCAGATGATCAGCCTTGCAAACAACCACAGATTAGCTGTAATTTTAACCAATCAGATGACAACAAAGTTTGATAGAAATCAGGCCTTGCTGGTTCCTGCACTGGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTTATCTTTCACTGGGACCAAAAGCAAAGGTTGGCGACATTGTACAAATCACCAAGCCAGAAGGAATCTACAGTACCATTTCAGATCACACCCCAGGGATTTAGAGATGCTATTGTTGCTACTGCATATTCATTGCAAACAGAAGGTTCATTGAATTCCCGGAAGCGATCACGGGACTCAGAGGAAGAACAGGAATCCAAAGACTAGTCTCAAAGTATACATGTGTATTGATGCTATGAAAGATGCAATGTTTACAAGTAGTAGACTCTTACTTTAGAGTATAAACACACTATGGTGTGAATGAATTAGGTCTATATATTAAGTGAATGGTGAATGAACAAATCAGGTCTATACTAAGTGAAACTACTTAACAAATATGATTCTCTAAAGGAGTTCTTCTAAATTAAGCATTGTTCTATAGTTATATGTGACCCTGTTTTCATTGTTAATAACATTGAGTAGAGATATTACAGGTACTGTGTTTTGCAAATGTGGAAAGCTGATCTCATGTGGCTAATCTGAATTTATTATTCAGACTGTTTTTTTCCCTCGTTTCTTTGCCAGTTGCCTAGACATTTCTAGGAAGAAAAGATTTTTTTCACACTACCATTGTGCTCTTCTCTTTAAATGTAGCTTTGATAACTCTTAAAAATGACCTATTTCTATAAAGAAAAGCCAGCACCATGAGTCAGCATATTATTACATCCAGTTGATTGGTAGGATACAAATTTTAGATGACCACTCTGATTTTAGTGACCTCAATCCTAAAATTGAAGTCATTGGTTCATTTTTTAATGTTATTTTATAATGTTGAAAGACTTAGAAGTTGTTATCCCATCTAGAACATTGACTGGGAACCTACATCTTCCAGTATATTCAGGTTGATAAGCTCACAGTCATTTATTTCTGTATTTTTGAAACATGATGTGATCCAGTTCTAGGTGTATTGACATTTTCCTTTGAATAATCTTAACACTGCTTGAATAAATTAAAAATCTGAATTCTTGAGTGGTTTCAAAATCTAAAAATGTTTTGGTACCTGGTTTGTCTTAGTACTTTTTTTTTTTTTTGTCTTAGTACTTCTTAATTCATTTACAAGATTTACTTTGACTCCTAGAGAAGAAAATTATTTAAGTGATGGAATATTATATAATGTGACAACCATATTTTCCAGATTTTAGTGACAGTTGGTATTTCCTGTCCCAGACTGAACACTAAATTCATAAAATTTTAAACATGTAATTATTCTGTAATTGATTATACACAATCTTAACTATAGTTTGCAAAGACTTTTTAAGAAGCAAAAGAAGGCTCTGCTAGCCATTATACCAGGACATAAATCAGGACTATCCCAGGAAAATCAGGTTTATGGGCATCCTAATTATCTAAGACTAATTTCAATTGATTACTTTAGGATAACCAAGTGTAGCTATCTTATTTTGGAGTACTTTAAGGCATATATTTTTATTATAATTAATGCAGTCATTGTAAAAATTTACTTGTCATTTTATATTCTGTCTATTCAAATCATAACATTAGGAGAGTAAAGGGGTTGTTAAGTGATAATTATCAGTGTTACCAGGCATCGGATACTGTAAGAACTCATTTTATAAAGCATTATGACACTGTACTTTAAAAGAACTGTAGGACTCTGAATATAGACAAAGCCAAGTGTATTTCTTTTGTTTGCAACTTTTTAAATAAAATTTATATATCATAGCTTTTCAAAATTGTTGCTATTGCTGAAAAGATATTTATTTTTCTAGTTATAAACTCAGTCTGCCTGGGCTGTAATAAAAAAAATACCACTGAATTACACAACAGAATTTTCTCATGGTTTTTCACAGTGTCCTGGCATGGTCTGGTTCTGGTGAGGGCTGTCTCCCTTGCTTGCAGACAGCTCCTTCTTACAGTGTGCTTACAAAGATTTTCCTAGGTGGATGTGTGTGGAGAAAGATCATTCTCTCTTCCTTGTCTTATATGGCCACCATTCGTATGAAAAAT EMBV3_32009 GCTCTGGTTCAAGGGGGCCTGGACAGCTTGGCGGCGGATGCTAACTTCATCATGGCCACG Gene GeneID:100337204|LOC100337204:XM_002694242:198_cdna Constitutive 0 NULL GeneID:100337204 16 GENE LOC100337204 NULL calcium channel, voltage-dependent, L type, alpha 1S subunit-like EMBV3_38821 TAAGACCAGCAGCAACTGCCCCAAATCTGGTATCATCTTCCTCACCAGAAGAGGCCTATC Gene GeneID:100297044|LOC100297044:XM_002695646:86_cdna Constitutive 0 NULL GeneID:100297044 19 GENE LOC100297044 NULL similar to chemokine (C-C motif) ligand 14 EMBV3_01281 GGGCAGTTCTGTCCTGCTGTTTTTACAGGCCTTTTTCAACAAATGCAGATTTTGTCATAA Gene GeneID:510125|LIN7C:NM_001075431:29_cdna Constitutive 1 NULL GeneID:510125 15 GENE LIN7C MGC140723 lin-7 homolog C (C. elegans) EMBV3_09594 TAAGAACCATCAGCCTGGTTCATCTTGTATCTCAGAGATAGTCAGGGCTGACTTAGCTGG Gene GeneID:614118|TSEN15:NM_001076312:29_cdna Constitutive 4 NULL GeneID:614118 16 GENE TSEN15 C16H1ORF19 tRNA splicing endonuclease 15 homolog (S. cerevisiae) EMBV3_39488 GATGAGCCACTGCCCAAACAGCCGCCATCTTTACAAAATGGACCCATCACGAATATTGAA Gene BVT0102_430693 + 0 NULL GK000030.2:130712930-130730264 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13316 GCCACATTTCTGAGTTCTTGCGTATGAATGTCATGCTCTCCTCCTATAGCCTGTGTCCCC Gene BVT0102_117604 + 0 NULL GK000010.2:52402374-52648525 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013987 TCONS_00013991 TCONS_00013992 TCONS_00013988 TCONS_00013986 TCONS_00013990 TCONS_00013989 TCONS_00013985 1 XLOC_008229 Coding TCONS_00013992 XLOC_008229 Coding Coding ALDH1A2 10:52393632-52412683 j TSS10242 2105 1 TCONS_00013992_2 110 5 0.889763779527559 0.00148718888615621 0.00652357994621325 0.00359414526457763 0.0042278365700518 0.00240541131428467 0.0019811467297451 0.00223679613975105 0.00185813404713297 0.00295322468693176 0.000127969524878292 2.49239185745154e-05 0.000129184352590357 9.12314691136093e-08 0.000128821042878367 8.83732710865757e-13 0.000189474707873131 7.64009737071848e-05 6.37098399182055e-05 0.0121622114931376 0.0140217014271789 0.00286579297284049 5.77521729600592e-05 2.44902722164777e-05 0.000100136116222635 0.0103803840022119 0.010730953861356 0.00261117416786963 3.95783220254326e-05 3.00676547346138e-13 9.34830223786654e-05 XM_002690855.3 ALDH1A2 PREDICTED: Bos taurus aldehyde dehydrogenase 1 family, member A2 (ALDH1A2), transcript variant X1, mRNA. 0.0 2535 99.93 0.668408551068884 NM_001206897.1 ALDH1A2 Homo sapiens aldehyde dehydrogenase 1 family, member A2 (ALDH1A2), 0.0 697 70.30 0.662232779097387 TCONS_00013992_2 sp|O94788|AL1A2_HUMAN AL1A2_HUMAN Retinal dehydrogenase 2; 8e-66 210 99.02 0.918181818181818 1 coding 1 1 1 0 -0.819561483183116 0.00599256312368728 -0.288907338117196 0.00457309737524953 GGCTGTTAACCAGGAAAGAGAAAGCACCCAAGCATCATCACACTTCCGCAGGAAACGACCAGTTGCAGATCAACCAGCAGCCCAGAGCAGTAGCTCTCAGTTCTGGAGCAGTGCCTGGGAGCTTGTGGAGAACACAGCTTTAGAACAAACAGTGAAATCAAGGGGTGCCAGGCAGGGCTGGGGAGTGGAGGTGTTAAATTCTAAGGGTAGATGTACGCAATCTTACTCTGGGAAAGTTTGGGATATTTTACAGTTATGTTCTGCTAAACTTAAACATCATTTAAATGATGAAGGCAGAAGTTTGGAGAACAGGTAAAAGGATGGAAAAACACCTATGTTGGATCCATCTGTTCTGCTGCAGATCTTTGGCCCTGTTCAGGAAATTTTGAGGTTTAAGACTATGGATGAAGTTATTGAAAGAGCCAACAACTCGGACTTCGGGCTTGTAGCAGCTGTCTTTACCAATGACATCAACAAGGCCCTCACAGTATCTTCTGCAATGCAAGCCGGGACTGTTTGGATCAATTGTTACAATGCCTTAAATGCCCAGAGCCCCTTTGGGGGATTCAAGATGTCTGGAAATGGGAGAGAAATGGGAGAATTTGGTTTGCGAGAGTACTCTGAAGTTAAGACTGTGACAGTAAAAATCCCCCAGAAGAACTCTTAAGATGGCCAAGAAGGAAGGCTCTCTCTCTTCACGCTCCCCTCCTGCTCCTCCAAGGAGATCTCAGCTGAGCTCATTTGGGGCAGATGTTTGGGCCGGGAACAATTTTCCAAGGTTTTGCAGCCAAATTACCGTTTCATGTTATCCATTTCTTCAAAGCAAAACATGAAATGGTTTTAGTTAGAGCCAGACCAGATTGAAAATGCCAGGAGCTGGTACACTGCAGATGTACTAAGGAGAAAGAACTTAGGAAGTTTCTGACCCAGTCTGGTTTTCTTACATCCATAAATAACTTGAGTGAAAGATCAGGAGATGGAGCTCCAGAGACCATTCTGTGTAGTTCACAGCCTCGGAGCTCACTGCATGGTTTGGGTGGGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATACACGTGCATGTATGCATTTAATTCCTTCTTGATTATTCTGGAATAAGTCAGGGGCTGGGTTGTTTTTCATAGATTGGTAAGATCTTGTCCAAAGTTTATGTTTCAAATCAACCAAAAAGTGATCTGAGTGGACTTGAGAATTTGGAAAGAAGATAGTGCTGGGTGCCTTGTTCTGCAGACAATTCATATGAAGTGAATTCTCCCTGCAGTTGGAATCCACAACCTCTTCTGCCCCCCAGTCCCCTGTGCCCACCACCTGCTAGTCCTGGTGCAGCAAGTGTTACTTCTGGCTCCCATGCCCTAGATCTGCTGGCGGTAACCTTGGAAGAGCTGGCCAGGCCTGGAGGTTTCCTTCTCCATTTGTAGTGTTGCAGTGTGCCATGATTGCCACGCCCCACCAGAGCTCCACTTGTCATGCTCGTGGCCCATCCACACACCTTTCTTGCCTCTTGGCCTCCTGGCAGGGTGGGGGGCATGGCGTGAAACAGGCCGGCCCCTCTCCCCCTCTCCTCCCAGCTGAGCACCACACTGCTGCTTCCCAGTGAAGGCTCCATGACGTGGGCAGTGTCAGCTTCCCTTCCAGCTGCCGAATCCAATTCATCTCTAACCTAGATGAAGATCACGTATTTAAAAGTACCAAACCTAACCTAGAGTGTATGAAAGATGGGCGACACATATATAGCCTTCTGTATTTAAGGGTTTTCTGCTTTCTAACGTTGCCAGTTGTCTATTTATAACCCTTGTGTCTACTCATGATATTTTAAAGAAATCTCTACTTGCTGTTATTGACAAAGGACAGTGGCTGGATGCCTTGAGAGAGCCACATTTCTGAGTTCTTGCGTATGAATGTCATGCTCTCCTCCTATAGCCTGTGTCCCCCATGAACATATCCACTAACCAGCTAGTTACCTTGAACTGCAATATAGAATGTGAAAATGAAGATTTATTTCTTTTAATTTACTTAAAAAGAAACCTCTGTGCTAGCAATAAAGCATTTATATTGTTTAAAAAAAAAAACCAAA EMBV3_22507 ACTGTACATAATACTGTGCATTCAACTGGTATTGTGGCGACATAACATGGTGCGGTTACT Gene GeneID:518905|SLC20A2:NM_001080280:76_cdna Constitutive 2 NULL GeneID:518905 27 GENE SLC20A2 MGC139607 solute carrier family 20 (phosphate transporter), member 2 EMBV3_27511 TCCCAACCTGTCACACCTGATGAGCAGCCGACCTTTGGGAAGAAGGTGATTTCTCCAGAA Gene GeneID:617274|ERMN:NM_001034799:157_cdna Constitutive 0 NULL GeneID:617274 2 GENE ERMN KIAA1189 MGC128529 ermin, ERM-like protein EMBV3_03180 CAAGGTGAAGGAGGTGCTGGACTCGGAGACACTGTGCAGAAGAGCCGTCAAAATCCTCAA Gene GeneID:515245|STK11:XM_002689171:216_cdna Constitutive 0 NULL GeneID:515245 7 GENE STK11 NULL serine/threonine kinase 11 EMBV3_36799 GACCCTGCTCTTCTCCTTCGCCCAGGCCGTGGCCAAAGCAGCCCAGGCCAGTGACCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20843 TGCTCTGGGATCCCAACGACTAAAAGAATGGTGTTTGACTTTGAACTGACTCCAGAAGAT Variant GeneID:282138|AKR1C4:NM_181027:11_cdna 686^851 1 EMBV3_43509 GeneID:282138 13 GENE AKR1C4 AKR1C1 MGC137190 aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4) EMBV3_10304 GCAGGATTTTAGCAAAGTGGTGCCTCCCCTGGATGAAGATGGACGGAGCTTGTTATCGCA Gene GeneID:519217|CDK2:NM_001014934:1037_cdna Constitutive 2 NULL GeneID:519217 5 GENE CDK2 NULL cyclin-dependent kinase 2 EMBV3_34000 TGGTTTGTTAATGCTAACTGGACTCCAAACTGATATTCTTGTACTGTTGTGTGGGGGTGG Gene GeneID:531699|LOC531699:XM_002685504:23_cdna Constitutive 0 NULL GeneID:531699 2 GENE LOC531699 NULL similar to aldehyde oxidase 3 EMBV3_33885 CTGCAGTCCGTTGGGTTGCAAAGAGCTGGACACAACTTAGCGGCTGAGCAACAACAATAA Gene BVV0102_386444 + 0 NULL GK000001.2:136903369-136947202 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02401 TCATTGAGGGGGAGCCCACCTGCTGCTTTGAGTGTGTGGAATGTCCTGATGGGGAGTACA Gene GeneID:281038|CASR:NM_174002:8_cdna UTR3_Alt 2 NULL GeneID:281038 1 GENE CASR NULL calcium-sensing receptor EMBV3_26900 TGAAGAACAGGACTTCCGAGGAGTGGATGAGCGATCTGGACGACCTCCTCGGGCCTCAGT Gene GeneID:100336926|LOC100336926:XM_002688497:101_cdna Constitutive 0 NULL GeneID:100336926 7 GENE LOC100336926 NULL mastermind-like 1-like EMBV3_10397 GACAAAGACCTTTCCAAACTGAAACGGAATCGCAAGCGCATCACCAACCAGATGACGGAC Gene GeneID:513742|DAAM1:NM_001081588:106_cdna UTR3_Alt 2 NULL GeneID:513742 10 GENE DAAM1 MGC139910 dishevelled associated activator of morphogenesis 1 EMBV3_23069 CGGAGCCATCTGTTGAGTCTTCAAGTCCAGGAAGGCGACATGCCGATTCATGAACTTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26850 CGTGCTATGTCCTAACTCCCTAAACAGCTTGTATTCGCTCAAGTGCTAACAGCGTCTCTC Gene GeneID:280960|XDH:NM_173972:2_cdna Constitutive 1 NULL GeneID:280960 11 GENE XDH NULL xanthine dehydrogenase EMBV3_27248 TCATCCTGGTTTCTGTCTTTGCCTATGATGCCTTCAAGATCTACCGGACCGAGATGGTGC Gene GeneID:510145|CMTM5:NM_001075434:125_cdna Constitutive 0 NULL GeneID:510145 10 GENE CMTM5 MGC142874 CKLF-like MARVEL transmembrane domain containing 5 EMBV3_30425 CGTGGAGCAGGAGAAGGAGGTGCTCCTAGAGATGACCTGGGAAACGCCCGGAGTCACCTG Variant GeneID:506107|BAG2:NM_001034264:86_cdna 341^542 3 EMBV3_31376 GeneID:506107 23 GENE BAG2 MGC128966 BCL2-associated athanogene 2 EMBV3_25813 CATAGTTTCTGCTTCTTTGGGGTGCAGATAAGTCCTTAGCAGGTGTGGCAGAGATGCCGA Gene BVV0101_047915 + 1 EMBV3_41085 GK000001.2:56894476-57054878 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35367 TTCCGGTAGGTGGAAAGCTGGGATGGAGAACTTTATATTGGATGGACCAGTCTGATGATC Gene BVT0102_258226 - 1 EMBV3_25357 GK000013.2:51742498-51797273 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20655 TCAACGGAGATACAGAGGCAGTATGAAGGCACGGAAGATGACCATGAGGTTCAGAAGACC Gene GeneID:781935|LOC781935:XM_002699683:5_cdna Constitutive 0 NULL GeneID:781935 X GENE LOC781935 NULL hypothetical LOC781935 EMBV3_42819 ATGTCTCAATGACGCCAAGGAACTGAATCTGCCCACAAGATGCAAGCCTGGATGAGGACC Gene BVT0102_072730 - 1 EMBV3_23116 GK000027.2:15462320-15476696 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38477 GAGGGAACCCAGGAGCCCTACACACTGGCCCACGAGGAGAACGTCCGATTTGTGTCAGAA Gene GeneID:618020|C25H16orf14:NM_001079511:288_cdna Constitutive 1 NULL GeneID:618020 25 GENE C25H16orf14 C16orf14 chromosome 16 open reading frame 14 ortholog EMBV3_02077 TTCAAACACTGTGGTGGCAACTTGTAGCAAAGAAGAGGTTGGGGTGGGAAAGGGGAGTGG Gene GeneID:281672|CCRL1:NM_174265:10_cdna Constitutive 0 NULL GeneID:281672 1 GENE CCRL1 NULL chemokine (C-C motif) receptor-like 1 EMBV3_19823 GAGTTTCCCACTTGATTACCCGTTAAGTCCCCCAATGACGAGAGCGGCGCCAACGTGGAC Variant GeneID:614471|UBE2G2:NM_001076328:75_cdna 79^262 2 EMBV3_11028 GeneID:614471 1 GENE UBE2G2 MGC140569 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) EMBV3_06786 GTGACACCTGTTCTCATTCGTTGTGTTTGGACACTGAACGCTGCTGAGCTTGGAACCTTC Gene GeneID:515078|TMEM62:XM_002690814:49_cdna Constitutive 0 NULL GeneID:515078 10 GENE TMEM62 NULL transmembrane protein 62 EMBV3_40631 CAGTACACATCATCCCCAGAATCCATGTGTTCCTGGCCCACTCTGTAATAGCTTAATAGA Gene GeneID:281751|EIF4E:NM_174310:2_cdna UTR3_Alt 2 NULL GeneID:281751 6 GENE EIF4E MGC134278 eukaryotic translation initiation factor 4E EMBV3_31895 TATGCCCTTATCCTCTCTAGCATTCTCCATATTCATTCCACCGAGGGCAGGTCCAAAGCG Gene GeneID:539185|LOC539185:XM_002699208:106_cdna Constitutive 0 NULL GeneID:539185 29 GENE LOC539185 NULL similar to olfactory receptor 145 EMBV3_09581 TAAGTGGGAACAATGTCTTGGAAACAGCTCACATTTGGACACAGAGCCCCTCACCCCTCT Gene GeneID:614757|C7H5orf45:NM_001167943:43_cdna Constitutive 3 NULL GeneID:614757 7 GENE C7H5orf45 NULL chromosome 5 open reading frame 45 homolog EMBV3_20513 TTTGGTGCTTACATCCTTTAAATTTATAAATTATGGTGAAAGGCCATAATTTGCTGGAGA Gene GeneID:506404|CENPK:XM_002696295:36_cdna Constitutive 0 NULL GeneID:506404 20 GENE CENPK NULL centromere protein K EMBV3_37891 CATTACGCCTGGGAGACCTAGCCCATACTTGACAGCGAATGACCAGGATTCCGACATCAA Gene GeneID:614476|LOC614476:NM_001079620:157_cdna Constitutive 0 NULL GeneID:614476 3 GENE LOC614476 NULL hypothetical protein LOC614476 EMBV3_06933 ACATCGTGCAGGACGCCATCCATAACTTCTCACCCGCCTACCAGAAGTACACGCAGCAGG Gene GeneID:524484|TMEM184A:NM_001046272:224_cdna Constitutive 0 NULL GeneID:524484 25 GENE TMEM184A MGC137812 transmembrane protein 184A EMBV3_39234 TGGACATGAGTGCCCAGGAGCCCCCGCAGGGTCGGAGATTCCCCATTGAGGCCGGAGACT Gene GeneID:614396|LOC614396:XM_002685614:269_cdna Constitutive 0 NULL GeneID:614396 2 GENE LOC614396 MGC148366 hypothetical protein LOC614396 EMBV3_04621 GGAAAGAGGGTGAATGGAGCTGGCAGCTGAGTTAGCTGGCTTAAAATATCTGACTTGGGC Gene BVT0102_292282 - 1 EMBV3_12228 GK000004.2:34021298-34143541 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11834 TTTGCTTCTCCTCTCAGGTGGCCTGTCTCCTTTTGTGAACAAGGCTGGTCTAAGGGAACC Gene BVT0102_281706 + 0 NULL GK000022.2:56487001-56530193 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131655 1 XLOC_080360 NonCoding TCONS_00131655 XLOC_080360 NonCoding NonCoding - 22:56488716-56489938 - TSS98522 1222 4 TCONS_00131655_5 61 0.338788870703764 1 0 0 0 0 0 0 0 0 0 0 1.01010097220816e-05 0 0 0 3.84942209043586e-05 0 0 3.39655099365468e-06 0 5.86819411185823e-06 0 0 0 0 9.79928873234652e-07 0.000175763346633646 0 0 0 0 0 XM_005213259.1 URM1 PREDICTED: Bos taurus ubiquitin related modifier 1 (URM1), 1e-57 228 86.73 0.157119476268412 0 noncoding 0 0 0 0 -0.0984343417911518 0.466843167271881 0.02104890877001 0.651870230387938 CGTGCAGGGGCGAGGCTGGGTGCCCAGGGCACCGCAGGACCGAAGGAGGAGCCCCCGTCAGTTCCGCCGGCGCAGCAGAGGCAGCGGAGACCGTCAGCGATGGCCGGTGAGCTGGGTGCAGCAGGATGGGAGGAGTTCATCCGAAGACGACGGGAGGGAGACTCTACCAAGGAAGGACCCACAGGACGATGCTAATCGGTGACGCTCCTTTCTGTTCTGTTCTCAAGCTCTCTCTATGCTTTCCTCTTCATTCCAAAGACCCCTGGGACAGGTTCCCTTAGACCAGCCTTGTTCACAAAAGGAGACAGGCCACCTGAGAGGAGAAGCAAATCTCCCCAAGCCCCGCAGTGAGGCGAGCCGCCACGTCAGGATTTGAACCCAGGGCTCCCGGACGCCAAAGGCTGAACTCTTTACCACCTTGAGTCAGTGGCTTCTGGAGTGGGCAGCTTGGGAGGCAAGGGAAACGGGAAGCCAGCTGGTTTTACTCTGTCAACCAAGGTTGAGGCGCAGTGGCCGTGGCCACCCTGAGGCCAGAAAGAGGGCACAGGAGGAAGACCCAGCACGGCTCAGGCTCCCTGTGGGCACACGGGCACTGTGGTCCATTCTGACCAACACTGCCCTTGCCTGGACGGCCAGGCTCTGGGATGTACTCACCACGGAATCACACCGGAAGGCAAAGTGTCAGTCGCTCAGTCGTGTCTGACTCTTTGCGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGGATGCTGGAGTGGGTTGCCATTCCCTTCTCCAGGGCATCTTCCCAACCCAGGGATGGAACCCACATTGGCGTTGGCAGGTGGATTCTTTACCATCTGAGCTACCTTTAACCAAAACACAGTGAATAAATCTCTGCCAGCAAATTTCCTTTTTTCCCCTTTCTTCCCTTGATGCAATAATTCAGCTTTGTTTTTTTCCCCTCTCTTTGCCAAAGCAATCTATACTCTATAATAATATATAATCTATACATAAAATGTAAACATTACAAAAATATGTATACCAACCCCCAGGGATCGCCACTGGCAATGTTTACTACAGACTCCTCCACAGATTTTTCTATGAATATATTAACATTAAAAGGTGGCACAGCAGTAAAGAATCTACCTGCCAGTGCAGAAGACAAGGAGATGGGGGTTCAATCCCAGGGTCAGGAAGATCCCCGGAGTAAGAAATGGC TCONS_00129229 . 5' 1547 TCONS_00129229 . 5' 1547 EMBV3_37549 GGAAGAGCTTGGTACTTGTGGGAACTTGTTTTCTCCCTGTGGACATCAGTGACGACTCTG Gene GeneID:530661|SLC7A6:NM_001075937:327_cdna Constitutive 2 NULL GeneID:530661 18 GENE SLC7A6 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 EMBV3_04998 GAGTACCGGCCTTATATTCTGGACTGAAACCTACCTTGATTCGCGCGTTCCCTGCCAATG Gene GeneID:532560|SLC25A15:NM_001046326:139_cdna Constitutive 1 NULL GeneID:532560 12 GENE SLC25A15 MGC137403 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 EMBV3_22594 CCCCAGTTCTCCCTGACAGAGCCCATGAAGGAGGAGGAAATGAGCTGGAAGGACATGTTT Variant GeneID:504517|MERIT40:NM_001076801:20_cdna 911^976 1 EMBV3_22478 GeneID:504517 7 GENE MERIT40 C19orf62 C7H19orf62 MGC139524 chromosome 19 open reading frame 62 ortholog EMBV3_22057 CTGCAGTGAAAATCTTCGAGCAAACAAAAGTTCAGGACCAGACAGATGGCTTCACAGGCG Gene BVT0102_198946 + 1 EMBV3_11926 GK000028.2:27185948-27226793 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01181 GGAGGATAGTGGCGCCTGTTTAAAACCCTGGGTGTAGGCGAGAAATACCGCTTCTTGAAT Gene BVT0102_034281 + 1 EMBV3_13074 GK000024.2:61447163-61511861 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140773 TCONS_00139543 2 XLOC_085212 XLOC_084924 NonCoding TCONS_00139543 XLOC_084924 NonCoding NonCoding - 24:61448762-61454669 - TSS104342 5390 1 TCONS_00139543_7 153 0.191094619666048 2 0.0877074161869286 0.00108766818116332 0.00105657743092167 0.000984388676659248 0.000946975633473659 0.000437997090859844 0.000153060366655092 0.000586696633915761 4.5519924387788e-05 3.49833775231722e-05 7.02960356076759e-10 1.89694523226939e-05 3.25060179389739e-05 0.000122745485601619 0.000209492800160413 0.000536896247170522 5.87931511850913e-05 0 0 0.000410764258551272 0.000566533639559541 0.000421564991098272 3.02875590984506e-05 1.69936940527847e-06 2.79880497460819e-05 0.000669995173652277 0.000555309302927059 0.000980556495226513 2.96271288587374e-06 9.00667512755887e-07 4.60039724355171e-05 XR_239930.1 LOC101903213 PREDICTED: Bos taurus uncharacterized LOC101903213 (LOC101903213), 0.0 6430 100.00 0.661224489795918 0 noncoding 0 0 1 0 -0.0511899013988333 0.77630062134282 0.0244325880418852 0.684397355006057 TGGGGTGAGGGGGCCTGACACGGGCAACTGTTGTGGGAAACATCCTGAAAGAGTTACAGGATTTGTGGTTCAGTTAGTAAAACAGCCAGACTGCAGAATTGGGAGTTGTTGAAGGAAAAATTGGAAGTTGCCAGGTTTTAAAATAGAGACAAAAAGAAAAAAATGTGTTGACATGGTTTTTTAAACTGTCAGATGGTTGAGAGAAAGCCTGGAAGTTGAGAGATGGGTTAGGGTAAGGGCAGGACAAGAGGGGGATGGCAGAGGCGGATGGAAGGACCCCTGGGCTGCAGAGCTGCGTTTTACCACGTGGATGACAAGCTTAAGTTATGGCTCCGAGGATTAAATAATAATGGGCAGGGTCCAGCACCATGAAATAGCACCAACGAGGCACTCAGATGTCAGCAGAATTCTGTTTCCATGAACAGAACTGTCTGCCTGAAGGCAGTGGTTGGTTGCGGCGGTGAGGAGCTTAGGAAATGTAGTTCTTCCTTATGTTAAGCTTAGTTGTTTGAGCTCTCTCCATTGATAAAAGATAAAATATTCCTTGTCCTCAAAAATTATTTGGGATTTCCCCAGGTGGTCTAGTGGATGACTCTGTGCTCCCAATGGAGGGGCCCAGGTTCGATTCCTGGTCAGATCCCACATGCTATGACTAAGACCCAATGCAACCAAATAAAGTATATATTAAAAATTATTTGGAGGCAACTCTGGGGTATAATATCCATGGGCTAAGTCTTGCAGAACCGAAGTAGAATAAGGTCTTACAAGGCAAATCCACATTGTAGTTTTTTTTAAGTGCTAAATACCTAAACTTTCTGAAGGTTCCCGAAAGATTAAAGCACAATGCCAAATAATCCCTCTCTCTCTCTTTTTTTTTTTTTTTAACAGGGAGCATCTAGTACTCAGGAGCACCACCCATTAGAGCCTGGAAGACACCTGTTTTCAATTCTATGTATTGATTACAAAAGCATTCTAAGGTTAAGGCAGTGAAAGCAAACGGAGGCAAGCTGTGGTAGCAGTTAACCCCATAACACTTCCATCTCTCCTCTCGAAGGAATGAAGAAAAATACTGACACCCCACCTACTGCACCCACAAAAAGGATGCACTTATTTCTGGAGAAATGAATTGAGATCTGGGGGATGGAGGAAGAGAGGGTACTCTTTTAAACATGGTTGCTGCATTTCTGGTCGTTTCTGTGGGGCTGGAGGAAAGTCTGCAGCGGGTCCTGTTTGGCGAATGAAGGGCCCTGGAGTCCAGGCTGAGAGTCCGGTGTCACCGCAGCTCCAACGCAGTCCACTGGAAACGGGCTCACCCGCCTCGAGACCAAGAGATTGCTCGTTGGGCAGCAGCGCCACCTGGTGGGGAGAGGACACCGCCACGAGCGGCCTGACGGGGGCGGAAGGCGCGAGGCATTTGGGGTGGTGACCTGAGCTCAGGGCCTTAAAGCTTGCCGGCGGCTGTCCGCGGAAGCAGTGTGAGCGGCCTCCCCTTTCAGCCTCCGCAGTCTCAGTAGGGCATACACATCTTACACGCACCGATGGTGCTTCACAGTCTCCCGTGCGAAGGGGTGCTTCTCCCTGTCCCCCCACCATTGCTCAGGGGGCTTCAGGGCCACGGGCGGTGAAGGCCCGGCCCCAGGTTCAGAGGAGGCTCCCCCTGCTCGCCCACGGCCCGCAGCGCCTCCCTGCTGAGCCCAAGGCCACGGCCTTTGAAGCCGCATAAAACGGTCGATACCCGTGGTCTTAGGAGCCTGGGGCCTCTGGACTCCCTGCGGGAGCAGAGGGCCGGCTCTGGGCGGCCCGAATGTCTCTTCGCTGCGTCTTTGTTGACGGATTTGAAGACGCGGGGTGAGGGGAGGCGTGCAGAGGTGGACGCCTCAGGACTTCTGGACGAGGCTTTAAGTGTTCTGTCTCCGATGAATTCAAGAAGCGGTATTTCTCGCCTACACCCAGGGTTTTAAACAGGCGCCACTATCCTCCGCTGAAACACCGACTTTTGCTCTGCAGAGGTTTTTATGATCCCCCAGATGTCTCGGTAAATCGAGCATTTAGTGACTCAAGACTTTGGAACTTCGGAAACGCAGCGGCAGGGCGCACAGAAGACACCTGACTGCTGACGCTGGAAAAGCTCTGAGAGTGACGTGTGGATGGTCGCAAGCACTCCCCCTCAGCCCGCGGGGCTCAGACTCCCCGGGCCGAAAACGGCGGCAGCAAAGGCACCTTCAGGCAGACACAGCGGCGGCCACATCCACCGCGGAAGCCCCTCTGGATGCTCTAGGGAGGCCGCCCGCTCACCAGGGGCCTGGGGCTCCTTCGTGCTCGAGTATCGAGGACTGGACTCGGGACATGGTCATCCCGCGTGCCTCGTTCGCCTTCATCAGACGAATTTGTGCAAGAGAGGAGGTCTTATTCCAGCACCACCCCCGATTCACACCACCTTCTCGGGCTCCTCTACGGAGTGGGGATAACGGTCACTTTGTTAGAATAGTTACAAGACTTAACTCCGGTGAAATGAATGAAGAACTCAATATCAGATACACAGCAGGCGCTCTGTAAGTTCGTGAAGGTGGCAAACACCTGAGTGCCCATTGGGGCGGACTGGTCACAGCCACACGACCGCCCCTGGAGGCTGGTGCGCTGCGTCGGCTTACAGCTGGGGCAACTGAGGCACGAAGGCGCCCCACTGAGGGCACAGAGCAGGTCAGCGGCCAGGCTGGGACTGGCCCCCGAGCCGCTCCTCCCCCCCCGCCCAGTTCTCTGTGCTGGGGTCCCAGGACGCTGCAGGCGGGGCGTGGACGTCCAGGGCGCCCCGTGCGGGGCCCAGGCCAGCTCTGCTGTGAGCCCTTCCGTCTGGGACACCTGGCCCTCCTGGACCTTCATCTCTCACCTGAAAGCTGAGTGCTTTCTTGGAAGAAGGTGGTAGACACTGAGCAGAATGACCGCAGAATTCTGACTGGAAGCTTGCCTTTTCTCTTTAAGTGATTTATCAGCTTTCTGTAGTTCTCTTTGATTTCACCGATGTGCGGCCCTTCGGGGGTGTGGCTAGGCGCACGAAGCCCAGCTGCGCCCAAGTGCTGATGGAGGGCACGTGGCACTCGGGAGAGGAGAGGAGGCCCGCGTGGGACCGGCCGGGCACCCGGGGCAGCGCCGAGCAGGCGGTGCTTCCTGTCGTCAGAGTTCTAGGCTCTTGTCTCCTTGAACCAATAAGGTTTTCACCTGGGGGGCCTTCCAGTCAAAGAAGGGAAGCTCACTTCCCGAGTCCTGTGCTGAAGGACACAGGGTCAGCCGTGGTCAGCAACACGACCCACAGCCAACCATGCTTTTACATCTTTCAGTGGTTGAGAAGAATACTTTTATCACGACACACAAAAATCCCCCAGAATTCATGTGTCAGTGTTCACAAAGTTTTTTGGAGTCCAGCCGCTCTCGTTCCTCTCGTGAAGGCTGCTTTCGCCAGGAAGTTGAGGAGTTATGAGAGACACCATATGACTATCAGAGCCCGAGATACTATCTGTGTTTTTATGGAAAAAGCTTGCTGAGCCCAGATGCCTATCAACCTTCTCTGAGTAAAGACGCACTGTCCGGTGCCTTTGAGGTCCTCTGTGTGAGTAGGAATCTCCTTTTTGCTGCAGAGTCGTCTTAGCACCGCGAGAGGGCCTCTGGCGCGCAGGTCCTGTGAGCCATGCAGCAAACATCTCTGGGCTCGGAGCTCAGTGTCATGGGGGCATAGCCATGGGGTCCCGGGGTGGACGGGTGAGCTCCGCCTGCTGAGAGCTGGGGAACGATTTGCAAAGGACACAACATTTCCAGGGCAGAGGGGCAGAAAGGAAGAAGTGAGACATTCTTAGTGAAGAGGCAGAGAGAGGGCAGAGAGTGTCATGGAAGACGGGCTTCAGAGAACGCCCTGGGACGCGGGGAGGTGCGGGCGCGGGGCTGGCGCGGACTCCGGCGAGACAGACGCGGCCTCAACCACGCAGGAGCCAGGACGGGCGGCCGCCTGGAGGAGAAAAGCGGACTCTTCTGCTCTTGCTGAGTCTGAGTGACACCTGGTTGTCCAGGCCCCAGATAGCAGAATCACCCGAAGGCTCGACTGAAAGCACAGATGTCTCAACCCTTCCCCATCCCCGGAACACCCCCCTAGAGAAGGGAGCTCCCCGGGGTTCACTGGGTGGGGGCCGGGAGGACGCAGCAACCTGCCAAAGAAGGCTGAGGAGGTGGCCGTACAGGAGGAGGTACCCTGGAGACACCGGGACTGAGATGGTCGTCACCGACACATGCAAGAGACCAGGAGTCACGGCCGAGAGCTTGCCAGTCATGAGGTCCTGGTGACTCTAAATGACAGTTTCAGAGGAATGGTGGGGCGGGGCGGGGGCAGCGGGCAGAGCCAGAGGAGGATGGGAGACCCGGGATCCATCCCCGGGTTGGGAAGATGCCCTGGAGGAGGGCATGGAACCCACTGCAGTGTTCTCACCTGGAGAACCCCACAGACAGAGGAGCCTGGCAGGCTACAGTCCACCAGGTGGCAAAGAGTCAGACACGACTGAGCAATTAACACTAGTACTATCTTTAAAGTATTGCTTAAATGAATGTAACTAGTGTTAAAAAACTTTTTAATATTTCAGATTTTTAACATTTTAAAAATAGTTCAAGACTATTTTTAACACTACTACTTATTTTTAAAGGCAGTATATATAATGCAGTATTTTGAATCCCAAGGCTGTCCCACTTGAACTGGGGCCCCTGAGCAAGTTCCCTGACTGTAAACAAAAGTTTACAAGAGTGTCCACCTCTTAGGGTTTTTGTGCAGGTTAAAACGTTCCAGGGTGGTGCGAGGCGTACAGGGAGCACTAACACGGTGTTCTACTTCCTTTAAAAATACTTTCTTATTCAGAACCTGCCCTCCTATTTCAGGGCCTGTCAAAATTAGGGATGCCTCCCTTCTTTGAATTATGAATGCATTGTTCTCTTGTTTGTGTCAGCTACTGCTTTTGCTTTACATCACTGCAATCATCCTATACACACATTTTCTTTTATATATATATAGTTGGTGAGCCAGTGTCGATCCTTTACTATTAACTAAAGCCCATAGTTAATGTCAGGGTTTACTCCTGGTCTTGTGCGTTCTGTGGGTTTTGACTGATGCATAATGACACGTCTCGCACAGAGTAAGCTTCACTCCCCTAGAGATCCCACGTTCTGCATACTCACCCCCCTCCCGCCCCTGGCAGCCACGCATCTTTTTACTGGCTCTGAAGGCTCGCCTTTTCCAGGTTGTCATATAGTTGGAACCCCATGGTATGTAGCCTTTTCAAATTGGCTCCTTTCACCCAGTAATATGCATGGAAGTTTCCTCCTGTCTTTTCGTGGCTCAATAACTTAGATTTTTACCC TCONS_00139539 TCONS_00139540 TCONS_00139541 s 3' 540 TCONS_00139539 TCONS_00139540 TCONS_00139541 s 3' 540 EMBV3_38576 TTACAACTTATTTTTTCTAATCAAAGTTGCTTTCCCCCATATATAGCACAGTCTGCTTTT Gene GeneID:280785|KERA:NM_173910:8_cdna Constitutive 0 NULL GeneID:280785 5 GENE KERA MGC143305 keratocan EMBV3_01117 TGTAATGATCCTGAATAGTTCAAAAAGAAAAGGTCTTAGCATGGTCAAACAGGCTTATGG Gene GeneID:535165|LIMCH1:XM_002688209:88_cdna Constitutive 0 NULL GeneID:535165 6 GENE LIMCH1 NULL LIM and calponin homology domains 1 EMBV3_13826 ACGCTCAAAATCCTCTTCTGGCTCCCAATCGCCGTCTTAGTCCCGAGTTGTTTGGTCCCT Gene BVV0102_291212 + 0 NULL GK000018.2:62759825-62760765 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084744 TCONS_00087546 TCONS_00087541 TCONS_00087543 TCONS_00084743 TCONS_00084745 TCONS_00087544 TCONS_00087542 TCONS_00087545 2 XLOC_051687 XLOC_052526 Coding TCONS_00084745 XLOC_051687 NonCoding Coding PPP1R12C 18:62758470-62760860 j TSS63442 1802 2 TCONS_00084745_5 74 0.0366259711431743 4 0.247383842611972 0.00335556214093404 0.00259857081025637 0.00188795207703374 0.000993933434676288 0.00473279399715212 0.00183477459544532 0.000938783719365132 0.000950269546001038 0.000764398209595732 0.00062457404131478 0.000338974346861965 8.14614812821997e-05 0.000243758788648731 0.000103335058183442 0.000234947245808159 0.00175884600475662 0.000307244648217569 0.00123687561001569 0.00370228542146841 0.0052717925005699 0.00148654596118631 0.00115738466145274 0.000606923686444503 0.000483086439834427 0.00162932343434295 0.00260477236881214 0.00405579533608214 0.000754375816659742 0.000458925856341145 0.000667326190913595 XM_589946.7 PPP1R12C PREDICTED: Bos taurus protein phosphatase 1, regulatory subunit 12C (PPP1R12C), mRNA. 0.0 1366 100.00 0.41953385127636 NM_001271618.1 PPP1R12C Homo sapiens protein phosphatase 1, regulatory subunit 12C (PPP1R12C), transcript variant 2, mRNA. 0.0 884 86.89 0.421753607103219 0 noncoding 1 0 0 0 -2.01363688671901 0.00915640638044917 -0.0697934074283741 0.22514847598232 GTCCCCAGAAGCAGGAGCGCTTTGCAGAGAGGCCTGCCCTTTTGGAGCTGGAGAGATTCGAGCGCAGGGCCCTGGAGCGAAAGGCAGCCGAACTGGAGGAGGAACTGAAGGCCCTGTCCGACCTCCGGGCTGACAACCAGAGGCTCAAGGATGAGAACGCAGCCCTGATTCGCGTCATCAGCAAACTCTCCAAGTGACTCTGGAGGAGCCCTTCCCCTGCACCCATATTTATACAGCTGCTTCTGCCACACGCACCCCTTCCCCCGCGTGAGCACGAGTGACAGGGCTCCCGGGGGAGTCTCCGAGAAGCCATAACCTCCCCTCGGGCCCTCCAGGCTGGGAGGGGAGTACAGAGAGCCCAGGAGCCAAGGGGGGGCCATCAGAGGCCGGGATGGAGGCGGGAGGCCGAGCCAGGTAGGGGGACGTCGCTGAGCAGGGACTGGGGCTGAGCGGGACCCGGGAGGGACCGAGGACCAAGAAGCACCGAGACCAGGAACCAGGACCAGAGTGGCCGCCCAGAGGTCCCCCTCTCACGTGTGATGTCACCCTCACCACCCCTCCCGCCCCAGAACAGGGATCCGAGAATGTGCCAAGAGCCCCGCCGGCCTCGGCCAGGCGGGCCTGTATATAGGGTCCGCGTGCAATAGGGAGGGATGTCTTCTATTTTTTGCGGCCCCCTCCCCGCCCACCGTCCGGGGCAGGGGGAGAAGGTATTTTCGAGACAAAGCACAGGCACCACAAATAAAAGTCGTGAAGTTGCCACTCAGTGACTACATCCTTGGCTGGAGGCGGGGCCCCGCTTCCTGCTGATGTGCTGCAGCTGTGCGTGACCAGACCACAGGACCGAGCGGGTGGGGTGCTGAAGGGCGGGAAGGGGCTTCAGGAAGAACGCTCAGTTGGAGCAAAGGCTCCCAACCAGTGCTGACATCGTCAAAAGTTGGCTTGGCACGAAGCAGGCAGGGTCAGTCAGGCAAGGGATAGGGGCTGTGATTATTGGGCTGGGGAGCTCGGCTCTTGCCATTACAGTTTTTGAAACAAATTTGCGTCAGTTACCAGCATTTAAAGTTTGGGGAATAGGAATCTAATAGTACAAACTATTCAGTTCAGCGTGGCAACAGTCGGCTGGAGCCCAATAGGAGCCATCCTCTAAGTTGGGGCATTCATTCATTGATTCAATCACTCCATCATTCGGGATCCTGTTCTACTTGCCAGGCCCTGGCCTGCCTGTCGATGGTGGAGTACCGATTGAGACAGGTAAAGATCCGATACATTTTAGAGGAGAGTCAGGAGGCATCCAGTAACAAATGTGTTGCAGGTGGTGGTGCTGAGGGGGAAAGCAGAGGCAGCAGGGGTTAGGGAGGCTGCTGTGCACGTGGGGGTGTGGAGACGGGCAGGGCCAGGATGCATGGGGGATGAGGAGGTGAGAGATGAAGTTGGAGAGGCAGGGACCAAACAACTCGGGACTAAGACGGCGATTGGGAGCCAGAAGAGGATTTTGAGCGTGGGGCGCACTGGGACACTGGATGTTCAGTCCCTCTGGAGTGAACTCAAGGACAACCTGGAGGCTGGGAGGTCAGAAGTCTGAGTTGGGGCCCCAGGGCGGGAGAGGAGGATTCAGAGGAAGAAACCAAGGAGAGTGGGGACACCTCCTGGATTCCTTTCCTGTTAGGCTGTATCTGGGGTTGAGGGGCAGGTTCTTGGCCCCTGATATCTGGGTAGAGAGGACAGCCGTTTACACCGCCTGCTAAGAGGAGGCTGTTTATAGACTGGGCCGCACATCACAATGCACAGGGCTCTCGAAC EMBV3_27913 GAGCTGTTTTTGATTGGGTACTCTGGGAACAGGGAAATTGGTGTTTAAAGAAGCAGCAGT Gene GeneID:507095|SPRY1:NM_001099366:17_cdna Constitutive 1 NULL GeneID:507095 17 GENE SPRY1 NULL sprouty homolog 1, antagonist of FGF signaling (Drosophila) EMBV3_15954 TTGACCGAGTCCCGGACCAACTAAACAAAGCCTGTTCCTTCAGCAAGTCCTCCAACAGGT Gene GeneID:280964|ZP3:NM_173974:29_cdna Constitutive 2 NULL GeneID:280964 25 GENE ZP3 NULL zona pellucida glycoprotein 3 (sperm receptor) EMBV3_08203 TTCATCATGGAGACCAAACTCAAGCCCCTGCGGAAGTGGGAGAAATTGCAGATGACCACA Gene GeneID:617247|MARCH1:XM_002688028:13_cdna Constitutive 0 NULL GeneID:617247 6 GENE MARCH1 NULL membrane-associated ring finger (C3HC4) 1 EMBV3_37646 CTAACAAATTTTATTCACAATGCATAGCATGACTTGCTTCAAATGCACAGCTCTTTATGG Gene GeneID:509596|ATP13A5:XM_002684860:243_cdna Constitutive 0 NULL GeneID:509596 1 GENE ATP13A5 NULL ATPase type 13A5 EMBV3_29618 TCAGGCAGTTCGGACAAAGACAGTTCAGCGGAGAGAACAAGAACTGTTCAACCGCATAGA Variant GeneID:518260|RTF1:XM_002690797:1_cdna 448^620 1 EMBV3_21021 GeneID:518260 10 GENE RTF1 NULL Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) EMBV3_33064 GTGGGGTGGTCTCTCTTGGGGATTTCACGTTTGTGATGAGCGACCACTCTTACATGATGT Gene GeneID:529792|CRLF2:XM_002699450:177_cdna Constitutive 0 NULL GeneID:529792 29 GENE CRLF2 NULL cytokine receptor-like factor 2 EMBV3_04987 CTGGTGAAGATGCGGGGATTCTTCCAACAAAGAAATCTATCCAGGCTCAGTGCTCTAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38096 AACAAGGGAGAAAGGGACAGATACACCCGACTGAATTCAGAGTTCCAGCGAATAGCAAGG Gene BVT0101_052694 + 1 EMBV3_25261 GK000009.2:30140794-30195128 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15706 CCCTGTTGCCCCTTCCTAAAACATGAGTTCAATTCAAAGTACTTTATACTCTTGGTTGTG Gene GeneID:613306|SMCR7L:XM_002687928:151_cdna Constitutive 2 NULL GeneID:613306 5 GENE SMCR7L NULL Smith-Magenis syndrome chromosome region, candidate 7-like EMBV3_39762 ACAGAGGCTACGAGTCTGTGCCAGCCATGGCCAAGTACGTCAAGGTCCTCTATGACTTCA Gene GeneID:614857|EPS8L2:XM_002699410:56_cdna Constitutive 0 NULL GeneID:614857 29 GENE EPS8L2 NULL EPS8-like 2 EMBV3_19265 CTAAACCAGATTGACGCCGAGGACCCAGAGGGCTTATGAACAGCTCAACGTGAAACATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34850 GTTTAATTCCATTGCTTTTGACTCCAGAAAGATCCCAGTGCCTTTTGACAATGGCCAGGG Gene BVT0102_054680 + 0 NULL GK000007.2:23882213-23954368 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032383 1 XLOC_018623 NonCoding TCONS_00032383 XLOC_018623 NonCoding NonCoding - 11:65246446-65247089 - TSS23382 643 2 TCONS_00032383_1 52 1 0 0.00123784239849409 0.000382872318507147 0.00116574563936698 0.00151101693598714 0.000890689055851528 0.000375507273908351 0.000412663936311519 0.000492126947708734 0.000918265970827268 0.00106114995296602 0.000105024702680645 0.000200193700917632 5.35480824717724e-05 0.00114124463646812 0.000232720146591259 0.00147871787688276 0.000361480540942919 0.00690682904810259 0.000273231252979237 0.000710195505149826 4.95725463617917e-05 0.000594344972759106 0.00120561020906699 0.00117760926601791 0.00015085321397929 0.000213665993763311 0.000528508415975679 0.000216601835676737 0.000373721539627986 0.00149137599349632 XM_001788616.3 SMARCC1 PREDICTED: Bos taurus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 (SMARCC1), 0.0 650 98.40 0.581648522550544 NM_003074.3 SMARCC1 Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 (SMARCC1), mRNA. 1e-124 450 86.74 0.581648522550544 0 noncoding GGCGGGTGGCAAGAGGAATGGGGACAATTCAGGGTGCGTGCTTGGGGCTGTGAGAAGAAAACTCCTGAAAGAAACCCAAGGAAGCGGAGGAACACAAGTCTTGTCATCCCCACTCCAGCTGGGGGTGCTGGGCGCGGACGTCCCCTGTGTCTTTCGGGCTAGGGCGCAGCCGAGGCTGGTGGGCCAGGAGCGGGAGACGGAGGGCCTCCGTCTGCAGGTGCTGGAGGTGGTGGCTGCTGCTGCGGCGGAGGGGGATACATGCCGTTAGGTGCCGTGAGGGGTACCCGGGGTCCTAAGATGTTTCCTGGGATTGGAGGCATACCAGGAGGGGTGGGGCCACTCCCAGGGGGGTGGATGCTGGCTGCAACAGTGGGCATCTTAAGATTTGCCTTTCAAACCCTCAGGTGTTACCTCTAAGCAGGTGGCCCTGGTCACCATCAGAGTACTGGAACCAAGGAGACCTTGTTCCTTTAGTGAGTTTATTCCAGGCCCTTGGAGTGAAAATGAGCTTGCTCCTACTGGAGTTTAATTCCATTGCTTTTGACTCCAGAAAAATTCCAGTGCCTTTCGACAATGGCCAGGGTTTTCTGTATTTTCCCGCCAGTCTTTCCCAAAGGAAACTCATTCCAAATACCTTTTCCAC TCONS_00025188 . 5' 200911 TCONS_00025188 . 5' 200911 EMBV3_22457 GGTTGGCTTATGCTGCCCCAAACAAGATGTCTCTAAGTGGTTTCTCAAAATACACATCCC Gene BVV0102_266259 + 0 NULL GK000010.2:79644199-79690914 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14989 TCTCTGTGGCTGAGCTGGCTGACTTTGTCTCCTCTGTTTTGTTGCTATTGGGTTCCTTGC Gene GeneID:787662|LOC787662:XM_002689080:11_cdna Constitutive 0 NULL GeneID:787662 7 GENE LOC787662 NULL similar to olfactory receptor MOR118-1 EMBV3_04832 CTAGGATTGAGGACCACTGTTTCCCCCTTTACGACATGCTCTAATTACACTGGACTCTGG Gene GeneID:510125|LIN7C:NM_001075431:29_cdna UTR3_Alt 1 NULL GeneID:510125 15 GENE LIN7C MGC140723 lin-7 homolog C (C. elegans) EMBV3_04948 CGTATCTTGACTATTCTAAATAATGCTGCATAGAGTATAGGCATGCATATCAGCATGTAT Gene GeneID:513253|EDEM2:NM_001101085:1021_cdna Constitutive 2 NULL GeneID:513253 13 GENE EDEM2 NULL ER degradation enhancer, mannosidase alpha-like 2 EMBV3_38054 CGATAACTAGAAATGGAAAGTGTGTAAGGGTATAAATGAAGCAAGACTGATCATGCATTG Gene BVT0102_141188 + 0 NULL GK000013.2:18251234-18259063 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19704 CACGCCAGTGGATGATCCTTCTTTGAGCATTCTTGTGGCCAATAATAGTGGTACTCTAAG Gene GeneID:505624|FBXL21:NM_001034252:10_cdna UTR3_Alt 2 NULL GeneID:505624 7 GENE FBXL21 MGC128882 F-box and leucine-rich repeat protein 21 (gene/pseudogene) EMBV3_32623 GCCAAGTTTCATAGCCTTTTACCACTGGCAGCACAAGTGCTTAGCTTGCTCAGTCACATC Gene BVV0102_399331 + 0 NULL GK000009.2:64751272-64765557 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28167 TCAGCAGTTGGATATTCTTGCCTCTGATGGTAGCTTATTTGCTCTGGGGCCAGGAGTTGG Gene GeneID:286852|PPP3CA:NM_174787:2_cdna Constitutive 0 NULL GeneID:286852 6 GENE PPP3CA NULL protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform EMBV3_03272 GTTCTGCTAGTTCTGCACTGTGAGGCGGCCGTGGGATTTGCCCTGATGCCACCTAATAAA Gene GeneID:100126042|ALDH4A1:NM_001105646:5_cdna Constitutive 0 NULL GeneID:100126042 2 GENE ALDH4A1 MGC139177 aldehyde dehydrogenase 4 family, member A1 EMBV3_41900 ACATGTCCTCTGTGGCTTCCAGCATCAAAGGAACAGTTGATACCCCATCTCTGCAAGAAA Variant GeneID:515321|BDH2:NM_001034488:44_cdna 678^791 2 EMBV3_07382 GeneID:515321 6 GENE BDH2 DHRS6 MGC127950 3-hydroxybutyrate dehydrogenase, type 2 EMBV3_34681 TGAACCCAGACGCCCCCCCACCCACTTCCGTGGCTATTTATCCCTTTCTTGATTTCCGAA Gene GeneID:540819|FOSB:NM_001102248:370_cdna Constitutive 2 NULL GeneID:540819 18 GENE FOSB MGC143206 FBJ murine osteosarcoma viral oncogene homolog B EMBV3_11381 ATGTTGCTAGGCTACTGTCTCGGAAAGCCCTGGATCTCTTTGCAGGGGTCTGTGATTAAG Gene GeneID:507622|FRY:XM_002691809:461_cdna Constitutive 0 NULL GeneID:507622 12 GENE FRY NULL furry homolog (Drosophila) EMBV3_09636 CATCTTCTTCGTGCCGGGCTTCCTGTTGCTGGTCCCAGGAGTCTACCACGTGATCTTCAT Gene GeneID:510129|TMEM134:NM_001080254:566_cdna Constitutive 1 NULL GeneID:510129 29 GENE TMEM134 MGC152115 transmembrane protein 134 EMBV3_02783 AGAAACTTGAGGAGCCTCCAGAGAGCCCAGCTGGATAACAGACATCAGTTCCGGTCAGAA Gene GeneID:100298308|LOC100298308:XR_084015:538_cdna Constitutive 0 NULL GeneID:100298308 21 PSEUDO LOC100298308 NULL hypothetical protein LOC100298308 EMBV3_34456 AGCCCACGCCTATGGGATATTAATGTTCTTTGCTGGACTTGGAAATAGCCTTGGACCACC Gene GeneID:539514|SLC16A9:XM_002698837:3_cdna Constitutive 0 NULL GeneID:539514 28 GENE SLC16A9 MCT9 solute carrier family 16, member 9 (monocarboxylic acid transporter 9) EMBV3_38327 TCAGGGTGTGAGTTTTCAAATCCTAGCTCTATCACTATCACTTGTTAAAGGTACTGAACC Gene BVT0102_340206 - 0 NULL GK000010.2:79270647-79451693 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33259 AGTGACTGTCTCAGAGGGGGCTCTCCTGACCCTGAACTGCACTTACCAGACTGCTTATTT Gene GeneID:100298264|LOC100298264:XM_002683715:5_cdna Constitutive 0 NULL GeneID:100298264 10 GENE LOC100298264 NULL hypothetical protein LOC100298264 EMBV3_03481 GGAACAGAGATGTAAAGAAGGCCCTGAGAAAGCAAGTTCGTATCCGACTCTTCGAGACCC Gene GeneID:783210|LOC783210:XM_002693114:522_cdna Constitutive 0 NULL GeneID:783210 15 GENE LOC783210 NULL similar to olfactory receptor MOR204-11 EMBV3_05345 CAGTGGATGCCTAGTAACTGACAAATATTACCCCAGCCAGGTGATCAAGGTCAACATCAA Gene BVV0102_260349 + 0 NULL GK000002.2:119443046-119476495 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07878 TTGTGCTTTGCCTCGCCTGGCTCCCTGAGCCGTCACCGTTTCATCAGCCACAAGAAGAAA Gene GeneID:787675|ZNF687:XM_002686043:245_cdna Constitutive 0 NULL GeneID:787675 3 GENE ZNF687 NULL zinc finger protein 687 EMBV3_42566 TAGGGTGCTGACTATGCCACCTACTACTCCCTTCATTACTCCTCACCCAGGCGAGCTCAT Gene GeneID:513795|ECHDC2:NM_001038536:52_cdna Constitutive 3 NULL GeneID:513795 3 GENE ECHDC2 MGC134069 enoyl Coenzyme A hydratase domain containing 2 EMBV3_35657 CCTGCCTCCTTTTTTAAATCGTTTCTAAGGCAGCATGATGAGGAGACTGACAACAACCCG Gene BVT0102_073307 + 0 NULL GK000015.2:29623548-29667706 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058718 TCONS_00058719 1 XLOC_036173 Coding TCONS_00058718 XLOC_036173 NonCoding Coding - 15:29643850-29655060 - TSS44172 1178 1 TCONS_00058718_1 44 2 0.8950843072531 0 0 8.65554324381893e-06 0 0 0 2.26347523979975e-144 0 0 0.000143201996804292 0.000466267080655065 0.000140575056594122 0 3.99319931292133e-06 0.000818394185086833 0 0 4.25968672612524e-05 0 0 0 1.8898147957484e-05 1.33588882771485e-195 0.000717816308621565 1.7606030132927e-207 0 7.99416168643321e-79 1.83428287177955e-05 0.000218415055901451 0.000224533057288807 XM_585092.5 KMT2A PREDICTED: Bos taurus lysine (K)-specific methyltransferase 2A (KMT2A), mRNA. 6e-55 219 100.00 0.101867572156197 XR_246488.1 LOC101929115 PREDICTED: Homo sapiens uncharacterized LOC101929115 (LOC101929115), misc_RNA. 1e-69 268 83.66 0.210526315789474 0 noncoding 0 0 0 0 0.0611235054007176 0.686090861137687 -0.0441929147517406 0.375853697762315 GAGTAGATAAGGGACAGTTTTACTGGTGGCTGCTTCTGGTGGAGAGAAAGAGGGTTATGAAGAGCTTATGAAGCAAAGTTATCCTTGGAAGGAGTTAGGGCTCTCTCTGATTTGTTTTAAGGGGGACCCAGGGAGGATGAAGGGTCTCGAGATTTGCTCTTTCCACATTAGTATCGGGAGGAGAATGGGGAGGCTTTGGTAGGCATTATTCGGCCCCCTTCAGCCAAAAGGAAAGTTGCCCTGGGAAGGGAAGTTGAGTTCAGGTTCAGCCAGTGGCGTTGCGCATTTGTTTTCCATTGGGTGCAGAAGGGGGAGTTTGAATTGGAGGGAAAGGGGCAGAATGGCATGGAGGGGGGTGCTAGAAGGAGGAAGAGCAGCTGCTTGGGGCTGAAGCTGAGTGGGTAGGGGGTTGCTGCTCTGGAGTGCTCTTGATTGAAACAGAAAGGGAAAGATAACAACGAGCCGTTTCCTGCGTGCTCTGCCGTTGGTGCACACAAAATATCCTGGGCAAACCCCTGGTCCCCTATTGTGCCCTGCACCCCTTTAGATCTACGGAAAGATCCTGGGAGGAAGGGGAGGGAGGAGATCCCAGGGACCCTGGCCCCTCCTTTCAAGGAGCTGGCATTTTTTAGTTGTTAGTCTTCCTGCCTCCTTTTTTAAATCGTTTCTAAGGCAGCATGATGAGGAGACTGACAACAACCCGCCTTCTGACAGAGCAAGGAGGACATGATGGGGGCGTGTTCCTTGCTCTCTAGCTAGCTGCAGCGTCCCTCTTCCCTGCCTCTCTCTGCTCTCTCTCCACCTCCTTTTCCCAGCCTTCAGAAGGCAGCTGCAGTCAGCAGGGTTGTTTGAGACTATTTATTGGTTGCTGTAGATTATTATTTTTTTTTGAAAGGCCAATTCTGTATTTTTTAAGCTAACAACACAGATCCCATGTAGTTGGAGAACCAAAGGCCTCATACATGACAAAAAGACTGAACCGTTCAGGTTACTTGCATGGAGTTGGTGCTTAAATCCCAGAAGGAAAGATGCAATCTGACTTTTACACCAAGATCAGAACAACAAGCTGGAAGAAAAAAAAAATGAAATATTCTAGTAGAAATTTATAATTGAATGAACATACACCTCAAAATGAAGTTAACTATTGGAAGTTGGCCTATGGAGGACCAGAACTTCTT TCONS_00058720 s 5' 0 TCONS_00058720 s 5' 0 EMBV3_15166 AACACAGAGGAGGAAATTGAGATGCCTGTCCCTGATGAACATCCGCTGGACTCTGAACCT Gene GeneID:528568|LOC528568:XM_002695367:61_cdna Constitutive 0 NULL GeneID:528568 18 GENE LOC528568 NULL similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 EMBV3_30016 ACAAGGGTCATTGTTAGTGACAGTGCCAGGTCTGGAAGATTCTCTCTCAGGTCTTCAGGT Gene GeneID:613444|MGC142695:NM_001076273:47_cdna Constitutive 0 NULL GeneID:613444 21 GENE MGC142695 NULL similar to C04F5.8 EMBV3_09142 GAGGAAGCCCCCCTAAGCGCAGAGGCCCAGAAGAACAAGCTCTTGGAGCCATCCGAACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30686 TCTCCCAGAAGACGAGAACACTCCGGAAAAGCGAGCAGAGAAGATCTGGGGATTCTTTGG Gene GeneID:281447|RCVRN:NM_174165:418_cdna Constitutive 0 NULL GeneID:281447 19 GENE RCVRN RCV1 recoverin EMBV3_29062 CTCTTTGGGGAGTCTCAGGAGAAGCAGCCAAGTAAAAGGGATGTGCCAAGGAGGACTGGA Gene GeneID:613715|C28H10ORF10:NM_001046515:38_cdna Constitutive 0 NULL GeneID:613715 28 GENE C28H10ORF10 MGC140248 chromosome 10 open reading frame 10 ortholog EMBV3_16391 CAGGGTCGCTGGCGGTAGGAATCTTCCAGTCGCAGTAGAGAAAGTATCAAAGGCTTCAAT Gene GeneID:282023|PTGS2:NM_174445:16_cdna UTR3_Alt 2 NULL GeneID:282023 16 GENE PTGS2 NULL prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) EMBV3_25014 TGGCCAGCACGTCACTCTGCCTCGGAAGACATCCTCAGGTTCTTTGCCACCCCCTCTTTC Gene GeneID:785689|HCN4:XM_002690493:447_cdna Constitutive 0 NULL GeneID:785689 10 GENE HCN4 NULL hyperpolarization activated cyclic nucleotide-gated potassium channel 4 EMBV3_39354 TAAACTCTGTAAACTCAACATGTGCGAAATTATGGGCCAGCCAGCCTTCCTGCCAGCCCA Gene BVT0102_334838 - 1 EMBV3_42092 GK000026.2:34990387-35006214 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150910 TCONS_00150908 TCONS_00150906 TCONS_00150905 TCONS_00150907 TCONS_00150904 1 XLOC_091973 Coding TCONS_00150910 XLOC_091973 Coding Coding TDRD1 26:34935823-34991452 j TSS112925 4726 1 TCONS_00150910_6 1185 0.0363944138806602 26 0.915510174732149 0.00418264795172264 0.00215157644618367 0.00268511086084057 0.00230992466638922 0.00289947866054518 0.00166842200599861 0.003004723730367 0.00207694113120945 0.0046345362294754 0.000101956444285508 4.77852090927499e-05 6.21782818899828e-13 0.000553873787884836 2.14487285646465e-17 0.001218389841392 0.00514546814190924 0.00141572187994935 0.00389367860007505 0.00326431465360426 0.00331977719860676 0.000772375268807554 0.00118605580691456 0.00144349247328236 0.0030464339062144 0.00739163443286466 0.00454019508958366 0.00380622816093857 0.00029084366210427 0.000176677450282831 0.000412179203011394 XM_002698529.2 LOC536516 PREDICTED: Bos taurus tudor domain-containing protein 1-like (LOC536516), mRNA. 0.0 8390 100.00 0.984130342784596 XM_005269978.1 TDRD1 PREDICTED: Homo sapiens tudor domain containing 1 (TDRD1), 0.0 4105 83.17 0.830512060939484 TCONS_00150910_6 sp|Q9BXT4|TDRD1_HUMAN TDRD1_HUMAN Tudor domain-containing protein 1; 0.0 1941 79.42 0.991561181434599 4 coding 1 1 1 1 0.129536331318771 0.448792853661156 -0.00675289684750024 0.883634137322704 AGGGTGCGCAACTGGGCGGCAGGGCTCCTGGCACGGGCAGACGCCACCACCACTACGAGGCTTCAGAGACGGACTTCTGTGAATGTTAAACTGCTGCTTAATATGATGTCAAGAAATATTTTGGCGGCATCTACCTGTAAAATGACAGAGCCATTTAATTTTGAGAAAAATGAAAGCAAGCTTCCATCACACGAGTCTTTGAGAAGTCCTGGAGGACATCCTAACCATCCTAATTTCAGGTTGAAAAGCCCAGAGAATGGAAATAAAAAGAACAATTTTTTGCTTTGTGAGCAAACCAAACAGTTTTTGGCTAGCCAGGAAGACAGTTCACTGTCTTCACACCCTAACGGTGTCAATGGAGAAATGGCTGGATCCAAGGAAGACAGGAAGACATTGCCAACAGGTAACGCTGTGTCACCATTAAATGTTGGAAATAATTCACCACCCAAAGAAGTAAATAGTAAGCCTAGCAATCATGTGCCTCCTGCAAAGTCAAAGAAAGTACACAAGTTGGTTGAGAATTCCTTGTCTATAAATAATCCAGCACTCTTCAACTCCTTAGGACCTCCTCTTCGATCGACAACTTGCCATCGCTGCGGTCTGTTCGGGTCGCTGAGGTGCTCACAGTGCAAGCAGACGTACTACTGCTCCAACATATGCCAGAGAAGGGACTGGGCAGCCCACAAAATTGTGTGCAAACCTGTCCAGCAAAATTTCCACAAACTTGAAGATTATAAATCACCTTTTGAAACAAAGAACATGGAAGTGAAAGATGAGAGTGACTCTCCTCTCAGAGTTATTAAAGAAAGAGCTATTTGTGCTGATAAAATAATGTTTTCTGATTTGAGAAGCCTGCAACTCAGGAAGACCATGGAAATAAAGGGTACAGTTACTGAATTCAAACACCCAGGTGACTTCTATGTGCAGTTATATTCTTCAGAAGTTTTAGAATGCATGAACCAACTGTCTGCAAGCTTAAAGGAAACTTACGCAAATAAGGCACATGAAGAAGATCATGTTCCTGTAAAGGGGGAGATTTGTGTTGCCAAGTACACTGTTGATCAGACCTGGAACAGAGTAATAATTCAGGATGTTGATCTGCTGCAGAAGGTGGCACAAGTCTTATATATTGATTATGGAAATGAAGAAGTAATCCCAATAAACAGAATTCACCAACTAAACAGGAAAATTGACTTGTTTCCTCCTTGTGCCATAAGATGCTCTGTGGCCAGTGTTATCCCGGCAGAGGGGAATTGGAGCAGTGATTGTATCAAAACTATTAAATTGCTGTTAATGGAGCAGTACTGCTCTTTAAAAATAGTGGACATCGTAAAAGAGGAAGAAGGCGTTACTTTTGCTGTGGATGTTATGATGACAAGTTCAGGAAAATTCTTAGACCATGTGCTCATAGAAATGGGATATGGTTTGAAACCTAAGGGACAGAATTCTAAGAAGCAAAGTACAGATTCAAGTGATCTTAAAGATGTCAGAAAAATGATGGCTGAAAATAAAATTGTCGTGGACAGAAGTGACCTCATCCCCAAAGTGTTGACTCTGAATGTAGGTGATGAGTTTTGTGGTGTGGTTGCCCATGTTCAGACTCCAGAAGACTTCTTTTGTCAACAGCTACAAAGTGGGCGTAAGCTTGCTGAGCTTCAGAGGTCGCTGGGCGAGTACTGCAGCCAGGTACCTCCGCGCTCGGATTTCTATCCCACCATTGGTGACATCTGCTGTGCTCAGTTCTCCGAGGATGACCAGTGGTACCGTGCCTCTGTTCTGGCTTACGCTTCTGAGGAGTCTGTACTGGTCGGATATGTAGACTATGGAAACTTTGAGATCCTTAGCTTGACAAGACTTTGCCCCATAACTCCCAAGTTGCTGGAATTGCCAATGCAAGCTATAAAGTGTGTGCTGGCAGGAGTAAAGCCATCATTAGGAATTTGGACTCCAGAAGCTGTTTGTCTGATGAAGAAAATTGTACAGAACAAAATGATCACAGTGAACGTGGTGGACAAGTTGGAAAACAGTTCCCTGGTGGAACTTACAGATCGATCTGTGACACCCCACATCAGTGTCACCAAAGCGCTCCTCAATGCAGGCTTTGCCGTGGAGGACAAGGGGCTTGTGACAGATAAGCCCAGTGACGTGAAAGAAGCCAGTGTTCCCTTGGGTATGGAAACAAAAGTCAATCCACTGGAGTGGACATGGGTTGAACTTGCTGTTGATCAAACACTGGATGTTGTGGTCTGTGTGATTGATAGTCCTGGAGAATTTTACTGCCATGTGCTTAAAGGGGATGGTGCCCTAAAGGAACTCAGTGATTTGAACAACTTACTAGCAGAATATTGCCAGCAGAAGTTGCCTAATGATTTTAAGGCAGAAATAGGGCAACCTTGTTGTGCTTTCTTTGTAGGTGACAATAATTGGTATCGGGCTTTGGTCAAGGAAATCTTACCAAACGGAAACTTTAAAGTACATTTTGTGGATTATGGAAACATTGAAGAAGTTACTGCAGATGAACTTCAAATGATCCCATCCAAGTTTCTAAAACTTCCATTTCAAGGGATACAGTGCTGGTTAGTAGGTATACAGCCTAGAAACAAACACTGGAGTAAAGAAGCCATAGCAAGATTTCAGACGTGTGTTGCCAGGATAAAACTCCAAGCCCAAGTGGTTGAAATCACTGAAAACGGAGTGGGGATTGAACTCACTGACCTTTCCACTTCTTATCCCAGAATCATTAGCGATATTCTGATTGATGAACATCTGGTTTTAAAAGCTGGTTCACCACATACAGACTTAGCGAAAACCAGACCTGTTGATAAGCATGACCTTCAGATTGATACCCCGGGGCTTCAAGCCATCTCTTCAGCTGATCAGTGGAGTACAATAGAATTGCCAGTTAATAAAACTGTACAAGCATGCATTTTAGAAATCACAAATGCAAACTTGTTTTATGCTCTACCAAATGAAATAGCAGAAGATCAGGAAAAACTGAGCGTATTGACGGCCGAATTGTTAGAATATTGCAATGCTCAGAAAAGCCGATCACCCTATACACCGAAAATTGGAGATGCGTGTTGTGCCAGATATACAAGCGATGATTGCTGGTACCGTGCCATCGTGCTGGGGACATCAGATGCCGACGTGAGAGTGCTCTATGTGGACTATGGAAACATCGAAACCCTGCCTCTCTGCAGAGTGCAGCCCATCTCTGCCAGGCACCTGGAGCTTCCTTTCCAAATTATCAAGTGTTCCCTTGACGGACTAATGGAATTGAATGGAAGATGTTCTCACCTAATGATAGAGCTACTGAAGAATTTCATGTTGAATCAGAATGTAATGATTTCTGTAAAAGGAGTTATCAAGAATGTCCACACGGTGTCAGTTGAGAAGTGTTCCGAGAATGGTATTATCAATATAGCTGATAAGCTGGTGATGTATGGTCTGGCAAAAAACATCACATCTAAAAAGCCAGCTGCTGTAAATACAGAAACGGCAGACAGGATGAACTGCTGCTGCACGAAGCTACAGAAACAAGTTGAAAAGCATGAGCAAATTCTTCTCTTCCTTTTAAACAATCCAACCAATCAAAATAAATTTATTGAAATGAAAAAATTGTTAAAAAATACAGCCTCTCTTGAAGATCAACACTTATGAGACAGGAAGTAGCGAAGGCTAGATTTAGGAGAGAAAGTACTGCATCTTGTGTTTTTGTTTGTTGGAAACTTTTTCTTTAATGACCTTTTATGTCTGCATTTTTTGTTTGCTTACCATTCTTCTGTCTAGGTTGGGTAGGTTTTTTTTTTCCCCCCTCTAAATGCATCCTCTCAGTCTCGCATTAAAGATACACAGTAAGTACATGGGAGCATCGGGAAGGGATACATAGGGGCTGTCTAGTCTACATAGAGCTTTTTATTACTTAAAGGTGCTGAAGAAAATATGGCTCCAGGTTAATACTGGGTCAGTTTAGTTGTTAGATACACAAGTTGTATTTTTTGGACTTTTCTCTGTATGTTTGATGTGTTTCATAATAAAATACACCCTGCTCTCCCTGTCACAACCTGTCTCTTCCACATAATAAAAGTTCTTTGGTTTGTTGTTGCTCGGGTCTCTGCCCTTCTTTTCCTGTCTACTCTGAGGTCATCAGTTTCTCTCTGTCTGTCCTCACTGAGATCACTTTTCTTTCAGCCCGTGGGCACAGTGTGCCCTTGGGCTCTCGCCCACTCTGACTGGGAAGGCAGTTTCTGCTCCTGCCATCCGTAGGTACCTTTCCAAATCTGTGGCCACTTGGATTTTTAGTGTAGTGGAATTTACATTTTCTGAAGCACAGATTCCTGGAGAACAGTTAACAGCTTAATGTAAAAAGCCAAGTTAGAGTATATATTTTTCTTGAAGCACATAAAGACATCTTAAACTCTGTAAACTCAACATGTGCGAAATTATGGGCCAGCCAGCCTTCCTGCCAGCCCATAAGTTTCTGTTTGGGAATTTTTTCACGATTTAAGTATCAGACTGTGAAAGCCTAAGATGTTGTCACCAACTCAAAGAAGAAACTTGACTTTTTGTTTGTTTGTTCTTTTAAAATGTACCTTTGCTGGTAATATGTGTTAGCAGGATTAAATGGAGTTTCACCTCATGTAAAAAGTTGTTCAAACATTGATATGCTTCTATGAGATAAAAATTTAAGCTGCTGTGCCCAATAAAATCCTTTTACTTCACAGCC EMBV3_24595 CCTCCTGTGTTGTTTTTTGGTTGGCATTACGTGGTGTCAGAAGCAGGATACAGGATGCAG Gene GeneID:613566|ZNF154:NM_001076277:61_cdna Constitutive 1 NULL GeneID:613566 18 GENE ZNF154 MGC152108 zinc finger protein 154 EMBV3_12727 GTGAACATGATGGACTGATCTGGCTTTGCAAGGAGCCACCTCTTAACCTGGTCTCCTGTT Gene GeneID:519342|EBF2:NM_001077939:42_cdna Constitutive 0 NULL GeneID:519342 8 GENE EBF2 NULL early B-cell factor 2 EMBV3_43489 AAAGGAAAACAGGAGATTTTAGATGCTGGGCTCTAGTGGAACTACTTAAAAAAAATTTTT Gene GeneID:781864|CRTAM:NM_001105457:240_cdna Constitutive 0 NULL GeneID:781864 15 GENE CRTAM MGC157183 cytotoxic and regulatory T cell molecule EMBV3_35820 TATGTTCGGGTCTTTTCCACAGTCTTACGGGTTCCATCCACCAAAGGTGTGCTCAAAGCC Gene GeneID:540082|LOC540082:XM_002695723:377_cdna Constitutive 0 NULL GeneID:540082 19 GENE LOC540082 NULL similar to olfactory receptor, family 1, subfamily A, member 1 EMBV3_17604 GCACGCTGATTCTGCCTCTGCACTACCTTCAACCCTTCTTTTCATACATCTTCCTCAACC Gene GeneID:614354|LASS3:NM_001099389:59_cdna UTR3_Alt 2 NULL GeneID:614354 21 GENE LASS3 NULL LAG1 homolog, ceramide synthase 3 EMBV3_03452 CATGGCCAAGCAAAGAAAGGAAAAGGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTG Gene GeneID:517669|ZNF638:XM_002691216:52_cdna Constitutive 0 NULL GeneID:517669 11 GENE ZNF638 NULL zinc finger protein 638 EMBV3_12047 GCTTGCTGGCATGGAAGAGGAAGACTTGGCATTTTCAACGAAAGAGGAGCAACAGCAGCT Gene GeneID:507984|ERCC3:NM_001045988:18_cdna Constitutive 0 NULL GeneID:507984 2 GENE ERCC3 MGC137777 excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) EMBV3_03109 TAGTGGGAATATTACACCATGGAAATCGCAAATGCTTTAAATGAGCACCATGTCCCCTCA Gene BVV0101_000758 + 0 NULL GK000001.2:116891633-116949543 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05888 GGGACATACGAGGATCCTGAAAAGTCCTAGAATATGCCTTGCGCATGAGTCGTCTGAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28525 TCCATTCCACTTCAAGGACCCAGGCCCAAGCAGCATGTGTGCATACTTCAAGAACAGCAG Gene GeneID:523530|NXF3:XM_002699798:30_cdna Constitutive 0 NULL GeneID:523530 X GENE NXF3 NULL nuclear RNA export factor 3 EMBV3_33142 TCCAGACCTTGCTCCAGTGAACTCTCCCCCAAGAACTTTCCAGCAATCGTCACATAACTC Gene BVT0102_383139 + 0 NULL GK000023.2:32942728-32950887 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02169 TAGATATGTCTCATTTCCTTTGGATCCCACTCTTATTCTATAATTCTGGCCAGTAACAAG Gene BVV0102_449327 + 0 NULL GK000007.2:73017101-73611116 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217692 TCONS_00217691 1 XLOC_131560 NonCoding TCONS_00217692 XLOC_131560 NonCoding NonCoding - 7:73446769-73448297 - TSS162056 638 1 TCONS_00217692_1 44 3 0.5841519318926 0.00127952641587835 0.00042191321537464 0.000609195024640797 0.000338412451357552 8.64888313761997e-05 0.000162593383813482 3.48498151735814e-05 0.000880717958377852 0 0 0 0 0 0 0.000223008513385595 0 0 0 0.000494547013012617 0.00126244550572723 2.13811885470341e-07 0 0 0 0.000228049547509481 0.000287026573055156 0.000996421640486222 0 0 0 0 noncoding 0 0 0 0 GTGGTGGAACCCAGGCTGGGCGGCCAGACTGAGGCAGAGGAGTTGCTGCTGGCCCGGAGGACTCCAGGCTCCCTCCCTCCCAACCCCTTGCCAGGGTCCTAGCCACTGTGCTTTTGATACACACCCGGCCGCAGCAGCCTGTCACCCTGGGTGCTGCCACAGGCCTCCACTCCCATCCCTGCACAGCCTGCGCTGATGCCTATGTCACAGCAGCACAGCCTACCCGTGGGTCCTTGAAGCTCCGGGGCAGCTGGGATACTGATGAAGGATGCTCACCCCTCGGGAGCGCCTTGGCAGGATGAAAGAAACAGAAGCTCACAGAAGAAGAGTCTGTAGCTCTACAACTGTTAAATGACCAAACAGACATGGAAACCAAACTCTGATCTGAAACCAGTACTTCCAGTTGCTTTACTGGCATTTGTTACCCAGGAGAAGAACACATTAAAAGGAGTTAAGTTGAATCAGCCTTGGTTTTGTTTTCTGTAAAAGTATTTTCAGAGATAATGTATATATTCAGCCTTGTACCCATTTGCAAGTATTAATATGTGTGATAAACTTGTTACTGGCCAGAATTATAGAATAAGAGTGGGATCCAAAGGAAATGAGACATATCTATTATTATTATCATGCTCATTATA TCONS_00214167 r 5' 164008 TCONS_00214167 r 5' 162820 EMBV3_31384 AAAGCTGGATCTTCTCACCAAAGTGCCGTTGCGAGCCCTGGAACTGGACAAGAACAGAGT Gene GeneID:504630|CENPP:NM_001105615:78_cdna Constitutive 0 NULL GeneID:504630 8 GENE CENPP MGC148497 centromere protein P EMBV3_37040 CACAGAAGGTGGCTGTGAAAACACAAGGAGGACCGCTGCACATGTAACAAGATAAGTACC Gene BVT0102_020095 + 0 NULL GK000014.2:33088085-33146709 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053149 TCONS_00053150 1 XLOC_031665 Coding TCONS_00053149 XLOC_031665 NonCoding Coding LOC100847363 14:33116013-33120374 j TSS39277 867 1 TCONS_00053149_1 88 4 0.802064220183486 5.40085020845902e-19 2.6332281041221e-09 0.00018797655683472 6.5347073735758e-09 0.000101516026651407 5.34109606807258e-05 4.53261483205144e-09 0 1.89315544426625e-18 0.000135974340275123 2.72850849021002e-08 1.30739070558867e-13 1.47162450245281e-10 2.15938602238739e-09 2.53602440605901e-24 0.000712307346546556 0.00122037585949085 0.0010996845818506 2.26091184621302e-38 5.28376078068806e-34 2.2647803587861e-09 6.93455868074808e-08 0.000496658903433704 0.000289130538686135 2.23848061481102e-05 8.60323648397782e-25 0.000166203298437269 4.29773690258692e-20 9.32270639057318e-05 4.81942354820086e-29 XR_227721.1 LOC100847363 PREDICTED: Bos taurus uncharacterized LOC100847363 (LOC100847363), 0.0 1362 100.00 0.869665513264129 NR_002599.1 SNHG6 Homo sapiens small nucleolar RNA host gene 6 (non-protein coding) (SNHG6), non-coding RNA. 3e-39 167 71.72 0.379469434832757 0 noncoding ATGCGGAAATCCCAAAAGCACTACTCAGCTCTCGGTGTAAACTGCCTTACCGCAAACACGCGCCGGCTGAGGGGCGGGGCCCAGGCCCGGAAGGGGCGGGGCCAGGCCTGGAGCGTCGGAGCGCCAAGCCGGGCCGTGGCGCTTTCTTTTCCGCTTGGCCGCGGGAGAAGGAAGGGCTTTGAGGCTCCGTCTGCCTTACGGGAGTGGCGGCAACGCCCGCGGACACGTCTCCCGGCTCTTCGAGGGGGGAAGTCCCCGCGGAGTTAGATCATTTTCTATTTCTCCCGGGAACCCGACTCCGTGCCAGAGTCTATAAGTCGGCCTCGGGCCACTCCGCCTTGTGCGTTCCGCCCCGGGGCCCCCCATCCCGATGGCCTCCGTCCATTGCCCGGCACAGCCCAGCGGTCGGCGCGGCCTAGGCCTCCAAGTCATCCCAGGAGGCCACCTTCCCCTCCCCCACCCGGTTGACGCCGCCTCGAGCTCTCCTCCGTGCTTCTGCTCAATCGCATTTTGTGTAGCAGTGCCTATGAGTTGAAGATCATTGTGATAAATGTTTTCCAAAAACCTGTCACAGAAGATGGCTGTGAAAACACAAGGAGGACCGCTGCACATGTAACAAGATAAGTACCTGCAAATGAATGTTCAAGTGCTTAGCAGTGGTGCTTAAAAACTCTTCATTACCTCAAAGGTGTGGCAAACGACGTTTTCGAAGGAAAAATGAAGAGTTGTTCAAGAAGACGTGCATTAAAGCAAGTGACAAAAATTAAAATTGTATTTAATGTTCATCTCACAATAAATTATGGAGAAAAGTACATCTTCCAATAATTTTAATTGCTGGGCAATAAAGTCTGTTCTCTTTAAAATATA EMBV3_20129 GGTCACTGATGAGCATTTTCCTGGTGTGTCTTTTGGCTTGCACCATTACCACGGTGATCG Gene GeneID:614175|LOC614175:XM_002697770:319_cdna Constitutive 0 NULL GeneID:614175 24 GENE LOC614175 NULL hypothetical LOC614175 EMBV3_14334 GAAGGTCCAGAATCTCTCGCTGCTGACTGTGCTGTTGTTGAACTTCCAGGAGAAGCTGAC Gene BVT0102_200308 + 1 EMBV3_01107 GK000021.2:71475036-71507508 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228109 TCONS_00228108 TCONS_00228107 1 XLOC_138426 Coding TCONS_00228109 XLOC_138426 Coding Coding - 8:73085149-73092345 - TSS170156 1832 1 TCONS_00228109_3 462 7 0.746351633078527 0.0316960626844146 0.0164036320592228 0.0258164970807032 0.0116078187749974 0.0106580582224051 0.00723774887307924 0.00598349339779916 0.00635864166344713 0.00675115438801781 0.00366709092268647 0.000964449242327534 3.73121130102701e-05 0.00116788812775598 0.00192276404240133 0.00192996963356634 7.38420932413715e-12 1.52349931940883e-12 1.16791513736116e-11 0.0133243480921835 0.0185781934477897 0.00788538010581014 3.7212757547323e-12 0.00350719263206394 2.70465384312713e-11 0.017524601909231 0.0121949082232591 0.0111169929050215 0.000705833251569227 0.00095501776633883 0.00176494179584231 XR_139194.2 LOC100847540 PREDICTED: Bos taurus uncharacterized LOC100847540 (LOC100847540), 2e-138 497 85.86 0.191593886462882 XR_250581.1 LOC101930558 PREDICTED: Homo sapiens uncharacterized LOC101930558 (LOC101930558), misc_RNA. 5e-08 64.4 80.00 0.0376637554585153 TCONS_00228109_3 sp|P01873|MUCM_MOUSE MUCM_MOUSE Ig mu chain C region membrane-bound form; 0.0 560 60.30 0.989177489177489 7 coding 0 0 1 1 -0.122644842424862 0.389454326479362 -0.00274564913981314 0.954651268778198 TTAAGCTGAGACCGTGCGCACGCCGTGCGCACTGTGAGTGTGCTCACAATCGTAGCTGGCCGGCTCCCTCCTGGCGATGAAGCAGCTTTCTCAGTGTGGCTCCCTCACTGCAGAATGTTCAGGGCTGCCTTTCAGAAGGTGAATCGCTCCCGAGAGTCTTCCCCCTGGTGTCCTGCATGAGCTCCCCATCCGATGAGAGCACGGTGGCCCTGGGCTGCCTGGCCCAGGACTTCATGCCCAATTCAGTCAGCTTCTCCTGGAAGTTCAACAACAGCACAGTCAGCAGCGAGAGATTCTGGACCTTCCCCGCAGTCCTGAGGGACGGCTTGTGGTCGGCCTCCTCTCAGGTGGTCCTGCCCTCCTCAAGCACCTTTCAAGGGCCGGATGACTACCTGGTGTGCGAAGTCCAGCACCCCAAGGGAGGAAAGACCGTCGGCACCGTGAGGGTGGTCACTCCAAAGGCAGAAGTGCTGTCCCCCATCGTGAGTGTCTTTGTCCCGCCTCGCAACAGCCTCTCTGGTGACGGCAATAGCAAGTCCAGCCTCATCTGCCAGGCCACGGACTTCAGCCCCAAACAGATCTCCTTGTCCTGGTTTCGTGATGGAAAGCGGATAGTGTCTGGCATTTCTGAAGGCCAGGTGGAGACTGTGCAGTCCTCACCCATAACTTTCAGGGCCTACAGCATGCTGACCATCACAGAGAAAGACTGGCTCAGCCAGAACGTGTACACCTGCCAGGTAGAACACAACAAGGAAACCTTCCAGAAGAACGTGTCCTCCTCATGTGATGCTGCACCACCATCTCCCATCGGGGTCTTCACCATCCCCCCATCCTTCGCCGACATCTTCCTCACGAAGTCAGCCAAGCTGTCCTGTCTGGTCACAAACCTGGCCTCCTATGATGGCCTGAACATCAGCTGGTCCCGTCAGAACGGCAAGGCCCTGGAGACCCACACGTATTTTGAGCGACACCTCAACGACACCTTCAGCGCCCGGGGTGAGGCCTCGGTCTGCTCGGAGGACTGGGAGTCCGGAGAGGAGTTCACGTGCACAGTGGCCCACTCGGACCTGCCCTTCCCAGAAAAGAACGCCGTCTCCAAGCCCAAAGACGTCGCCATGAAACCGCCGTCCGTGTACCTGCTGCCTCCAACGCGGGAACAGCTGAGCCTGCGGGAGTCGGCCTCCGTCACCTGCCTGGTGAAGGGCTTCGCGCCCGCGGACGTGTTCGTGCAGTGGCTGCAGAGGGGGGAGCCCGTGACCAAGAGCAAGTACGTGACCAGCAGCCCGGCGCCCGAGCCCCAGGACCCCAGCGTGTACTTTGTGCACAGCATCCTCACGGTGGCCGAGGAGGACTGGAGCAAAGGGGAGACCTACACCTGCGTCGTGGGCCACGAGGCCCTGCCCCACATGGTCACCGAGCGGACCGTGGACAAGTCCACCGAGGGGGAGGTGAGCGCCGAGGAGGAAGGCTTTGAGAACCTCAACACCATGGCCTCCACCTTCATCGTGCTCTTCCTCCTGAGCCTCTTCTACAGCACCACGGTCACCCTGTTCAAGGTGAAGTGACGGCCAGCCAAGAACATGGGGCACCAGAGACGGAACACGAGGGGCTGCCTTGGGGCCGGGTCCCTGGCCTATGTGGCTTGTCCGCTTGTACTGAAATTTTCCCTGCGTCCTCTCCAGCTTCAAGCTGTAAGAAACTGGCTTTTCTCGGAGCAGCTGAGTGCCATGGCCAAGCATGGAGCCCGCAGTAATAGGCTCCACCTGGCCCTGCTTTGCAATGTCGCATTTGTGGCCTTGAAATAAACAAGTATACTTTATCTTGTGAAACCG TCONS_00225843 TCONS_00225844 r 5' 62419 TCONS_00225843 TCONS_00225844 r 5' 55499 EMBV3_11484 TTCTCCTTTCATACTTGTTAGCATTTGTCTTACGTACTGTGGTGCTCCCGTGTTGGGTGC Gene BVT0102_270437 + 1 EMBV3_04361 GK000024.2:61792099-61816381 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00218178 TCONS_00010367 TCONS_00022064 TCONS_00214738 TCONS_00250553 TCONS_00098385 TCONS_00251853 TCONS_00165811 TCONS_00032587 TCONS_00070841 TCONS_00141355 TCONS_00031938 TCONS_00141464 TCONS_00177994 TCONS_00210178 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00200531 TCONS_00198662 TCONS_00088289 TCONS_00073692 TCONS_00056147 TCONS_00116799 TCONS_00089425 TCONS_00019991 TCONS_00189806 TCONS_00197973 TCONS_00207228 TCONS_00250544 TCONS_00239410 32 XLOC_142855 XLOC_131641 XLOC_005918 XLOC_012735 XLOC_130757 XLOC_153496 XLOC_058631 XLOC_154794 XLOC_100651 XLOC_018827 XLOC_042618 XLOC_085783 XLOC_018183 XLOC_085892 XLOC_107767 XLOC_128688 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_120316 XLOC_053076 XLOC_045454 XLOC_033950 XLOC_070965 XLOC_054210 XLOC_010669 XLOC_115843 XLOC_119632 XLOC_125746 XLOC_153487 XLOC_146076 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_18958 ACGATGAGCTGTTCGGCCCGACCTTCCTCCAGAAATCAGACCCGACTGCGTACCGGATCA Gene GeneID:538878|ZNF70:XM_002694689:276_cdna Constitutive 0 NULL GeneID:538878 17 GENE ZNF70 NULL zinc finger protein 70 EMBV3_01453 TTAGACCTGGCCTTTTTTCTTAAAAATCTGTGCAGAGGGTGCAGGTAATGTCCCCAGGCC Gene GeneID:282446|IDH3A:NM_174644:25_cdna Constitutive 0 NULL GeneID:282446 21 GENE IDH3A BG1 KIAA0631 MGC139736 isocitrate dehydrogenase 3 (NAD+) alpha EMBV3_30717 TGTCCAAGTTTAGCAGTTGGCCAGTGCCTCCACCCACATCACTCCCCTCTTCAATTCTGT Gene BVT0102_140431 + 0 NULL GK000003.2:19119707-19128444 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172322 TCONS_00172325 TCONS_00172320 TCONS_00172321 TCONS_00172323 TCONS_00172324 1 XLOC_104108 Coding TCONS_00172321 XLOC_104108 Coding Coding SNX27 3:19125139-19178920 j TSS128389 5226 1 TCONS_00172321_3 355 12 0.903049460766084 0.0026213032464628 0.00224376726863209 0.00184245036595359 0.00217496686756156 0.00137020141994887 0.000698862319809412 0.0014554780199387 0.000609514526223 0.00172890011778162 2.86399250014275e-21 5.37262008515693e-19 8.65140351213643e-05 9.21335200110313e-05 0.000426610891061961 5.71133116461685e-11 0.00303374991640421 0.000683092689325043 0.000553654080454944 0.00307757358953935 0.00107564190516896 0.00135707855045254 0.000437624024385417 0.000862210700441771 6.19284306621302e-08 0.00267778153820272 0.00308218269376613 0.0011306056630095 0.000323853826301934 0.000112310905303806 0.00043848676622919 XR_233876.1 SNX27 PREDICTED: Bos taurus sorting nexin family member 27 (SNX27), 0.0 7654 100.00 0.811902028319939 XM_005245509.1 SNX27 PREDICTED: Homo sapiens sorting nexin family member 27 (SNX27), 0.0 3113 91.40 0.425181783390739 TCONS_00172321_3 sp|A5PKA5|SNX27_BOVIN SNX27_BOVIN Sorting nexin-27; 0.0 753 100.00 0.997183098591549 2 coding 1 1 0 0 0.000575304376708986 0.997018102697905 0.0536020853700969 0.422578512694938 ATAGAAGAAACTAGTGTGTATGAAGATATGATCATTTAATTCCCAAGGAACGGCGTGAATGTTGAGGGGGCGACACACAAGCAGGTGGTGGACCTGATCCGAGCAGGCGAGAAGGAATTGATCTTGACAGTGTTATCGGTACCTCCTCATGAGGCAGATAATCTAGATCCCAGTGACGACTCGTTGGGACAATCATTTTATGATTACACAGAAAAGCAAGCAGTGCCCATATCGGTCCCCACATACAAACATGTGGAGCAGAATGGTGAGAAATTTGTGGTCTACAATGTTTACATGGCAGGGAGGCAGCTGTGTTCTAAGCGGTACCGGGAATTTGCCATCTTACACCAGAACCTGAAGAGAGAGTTTGCCAACTTTACATTTCCCCGACTTCCAGGGAAGTGGCCATTCTCTTTATCAGAACAGCAATTAGATGCCCGACGTCGGGGGTTGGAAGAATATCTAGAAAAAGTGTGCTCAATACGAGTCATTGGCGAAAGTGACATCATGCAGGAATTTCTATCAGAATCAGATGAGAATTACAATGGTGTGTCCGATGTAGAGCTGAGAGTAGCATTACCAGATGGAACGACAGTTACAGTCAGGGTTAAAAAGAATAGTACTACAGACCAAGTATATCAGGCAATTGCAGCAAAGGTTGGCATGGACAGTACGACAGTGAATTACTTTGCCTTATTTGAAGTGATCAATCATTCCTTTGTGCGTAAGCTGGCACCTAATGAATTTCCCCATAAACTCTACGTCCAGAATTACACATCAGCTGTGCCAGGTACCTGCTTGACCATTCGAAAGTGGCTTTTTACGACAGAAGAAGAAATTCTCTTAAATGACAATGACCTTGCTGTTACGTACTTCTTTCATCAGGCTGTTGATGATGTGAAAAAAGGTTACATCAAAGCAGAGGAAAAATCCTACCAATTACAGAAGCTCTATGAACAAAGGAAAATGGTCATGTACCTCAACATGCTAAGGACTTGTGAGGGCTACAATGAAATTATCTTCCCCCACTGTGCCTGCGACTCCAGGAGGAAGGGGCATGTCATCACAGCCATCAGCATCACGCACTTTAAATTGCATGCCTGCACTGAAGAAGGACAGCTGGAGAACCAGGTAATAGCATTTGAATGGGATGAGATGCAGCGATGGGATACAGATGAAGAAGGAATGGCCTTCTGTTTTGAATATGCGCGAGGAGAGAAGAAGCCTCGATGGGTTAAAATCTTCACACCATATTTTAATTACATGCATGAATGCTTCGAGAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGAACATTTTCCAGATGGCGAGGTCACAACAGAGAGATGTGGCCACCTAGCCTTTCATTACCCTGTTCCTTCTCTTCACCTTCATCCTCTTATCCCTTTCGTCTCCCATGTCAGACAGAGTAACCATTAACACAAAAGAAGAGAAAAAGGAAAAAAGTCATTATATTCAAAAGCCCTAAACTAAATGTCATTAATAATCCTTCTGAGTTTCATATCTCTGTAATTGAGCTGGTAGAGAAGAATAGATGGGTCAGCACCAGGAGTCAGCTGAGTTAAGACAGGAAAAGAAATAAGCCCAACCAATTCGCCAAAGGGATCTTTGTCCTTTCCTCTGGGCCTCATACCAACAGACTCTCCTTGTACTATATTTTTAGAACTGGAACTATGAACTCCATCCATTTGCACTGTTCAGACATATATATGTATGTATGTAAAAATTATATATACGCAAATTAGCTGCACGTATATACATATATATATTTCTTTTTAAATTTCATATTGATGGCAGTACCTTTTTTAGCTTGTGTTTTTACACACCTTTCACTAGAACTCATGATTTCTCTCTTGCTCTCTTTATTTTGAAACAAACTTTAAAAAGGAAAAAAAAAATTTTACAGGGAAAAATACCTCTCCTCATGAAGGACTCGAAAAGTTTACAACCTGCTCGGGTTTTCCCCCCTTTTTTGTATTGAATGAAGATTTTGGACCATGGGTTGCCATAGAGTCTGAGGAGCAAGGAGCATAGTTTCTTTATCTTCAAAAGGCTGCTGGGGAGGAGACAGAAGTGTGTTTTTCAAGGGCAGTGGGGCTGCAGATCTGCAGGAAGAGTCTGAAGACTTGGTGTGGTCTCTCTTGATTCCAAGACAACGTTCCTGGTCCATTTCTCTGTCTTCCACTCATGGCCTTTAGCCACATTCCACATCTTCCTGCTTCCTAAGGGCCCCCTGTGTGCTTTTCCAGCAGGCCTAGAATGAACGGGAAGGGGAGCTCAGGAGGTTGATGCCCAGACGCCTGAAACACTTCATGGTCATGATTGCCCATTTCTCTGCTGTTTGTAAAGCAGGGGTCGTACTCAGGACCAGAGTCAAAGCTGACATCTTTAGGCACAAAGATTGGACTTAGGTAGGGGAGGAAAGAAGAAAGGCGCTGTGTACGTAAGCTTCTTCCTACTCCGTTCCTACCAGTAACACCGTAACTGTTAGGTTCTCTGTGACTTCCTTAAACAACCATGTTGGGGAAGGATCTGACCATATCCCCAAGGCCTTGGGGAAACTTGGAATGGGTCAGTGATCTGAGCCAAGCAAAACCATAACCCGTCTAAGCCAGCTGAGGACCCAGAAAGGAACAGTAGGAATATGGTTGATTTGGGTTGGATCTCAACTTTTAATTAAAAGGAGATTGAAGGAAAATATTTTTGTCCCTTAAAAGAGCGCCTCATCCGACCTTGCAGTTAGACCTTTTGAGACCTAAGAACTGCATTCCTGGGTCTGGGGCCAGGGCTGACTGGGGGTTGAGAATGTCGCTCTCTCAAAGGCTGCCCTCCGGGCGTGAGAGCAGCAGGAGCAACATTCTCAACCCCCAGGCTCCAAAGAGATGGTGTTGAGAGCTCGTAGTCAGGCTCTGCTGTTTCTGAAACACATCTTTGAGCCTCTTTTACTTTTTTCCTTCTCTGCCTTCTGCACAAAAGCCCTCACAGAGTGGCATCTTTTGCTTTGTCTAACTGGGAGGCAACCATAGTTGGCTGTAGTCACTGAGCAGTGTTGGGGTGGTTTGAAGTTTCTGTTTCTGTAACTTGTTTCTGCAGATGGTTGTGAGGCACTTTACTTTCTCTCTCACTCTGTTACCCTGGCAGGCACTTGCCCCGGGGGGTGTGGTATCATGTAGGACATCCAGTCTTCCCTCGCCTTCTCCAAACCAGGCAGGATCGCAGAGTGCAAACTGTAAGGAGGCTGTGCTTAAAGTCGCAGAGAGAGAGCCCTGCCTTGGAGGCTTTGGCACAGAATTAACTTCTTCTGGCATAAGTGAATTTAATAATGAGCCAGAGGACCACGGGAAGAAGGTATGTTGATTGCCCACTCCAAGGAGCTGAAGAGGTTTTTGGCCCCAGCTCCGTTCACACTTTAAAAATAGCAGTTTGCTCCTATTCTGTCAGAGTGGGAGAGGAATGAACAAATCCTGGAGTCCATGGGAAGCCCAAAGGCTGCCCTGCAGATGTGAGAGCAGCGGGGGTGCTCTTAGCGTGTGTAGACGCTGTTCCCTCCCTCCGCCCTGACCTGGCACTCACTTTGCACTTGGAGATTGGGTGGGGCCCACTGGATGGTTAGCCTGTTGGGAGAATATGTTGAGGGCCAGCCCCTACTTGAGGCTGTTCCATTAACAAAGCCCCAGCTTGGGGAGAAGGGGAAGGAGGGAAGGCCCAGAGGAAGGCTTTCTCGTCTCTTCCATTCACAGCAGGTGTCTTGCGATGGAGGCAGAGGTCTCTGGGGCTGTGCAGCTCCTAGGGTCAAGCTCTTCTTTGCATGAAGCAGTGTTCGTGTGATACCCTTTCCCTATTACTCTGCACTTCCTTTCTCAAATCCCTACTATCTTTCTTAGTCCTGGGTTCTGCTCAGGGAGGCTTCTCCTCAGTCTTTTTTTTTGCAATTTGTCTCCAGGAAATGGAGAAGTCCCCCTGCGCCCTGCTTTGCCCGCAGCAAAGCCAGCAGGATTGCCCTGGTCTCCTCTCCTTTCACCCCCACAGAGAGTTCCCATCCTCTTTGATAAAAGCTCAAAGTTGTTAGGGGTCAGGAGAAAAATGCAGGCCCTGAGAAACCTATCTCTGTAGAAAGTTTCCCTTGGCCCGTGCTTTGGGTTTTCTGCTCTTTATAGTTTAATTTTACTCTCCATTTTTCTCCCCTCCCCTTGCTCTAGGTCTAAGCTCAGCACAGGTGTGTGCTCAGGGCAGCTCCTAGGCCTGGACAGCTCTCAGGGAGGAATTAGGTAAATGTTCAGCATCCCCATACCTGGCCCATCTGGTTTCATCCTTTGCCCAGGCCAGTAGCTTTGGGTCACTCTCTCTTGTACCTCTAAATCCAGTGCTTGGAGCAGCCGTATAGGGCTCTGATGGGAGGTGATACCTCTGTCTCTCATTTCAGAATTTGCCAACTCGGGGACCTGGCTCTGGAAGGCAGTTTTCTTAAAGGGGATGTCATCCTGGGTGACCGGAAGTCTCCAAACCTAGAGGGACAGCGGTGCCCTCCCTTCTGTCCTTGGTGTTCTCTGGATTGATTCAGCAGTAGAAACCATTTGGTCTGTTGGGCCCCAGCACACCTGCTAGGTTCCTTCCAGGTTCACTGTGTCACATTAGCTTCCCTTTGGGAGGGTGATGTGGTTGAATACTCAGAGAGGAGAGGGGGTTGGTGTGCGTCGTTAGTCCCCCACCTTCCGGTTTCACCTCCTGCCTTCCTCTTCCTCTAAACCTGAGCACGTCATGCCAAGGCTCACTCATACGCAGTGGCGTCAGCTCACTCCTCAGCAGTAATCTAGGATGTGTGGGAAGCTTAGGGTTCTGGGGAGGAACAGAATTGAAGAGGGGAGTGATGTGGGTGGAGGCACTGGCCAACTGCTAAACTTGGACACCAGTTTTATATCACGCCCCCTTTGTAAGCCAGTGAGCTGGGCTTCAGTTTTCCCCAAACCATGCACACTTTTAATTTATTTGAGAGAAACTCTAATTGTATTTTCACTGCAGTATCTTGTATTTTTTATTTGTGATTTAGGAAATGTGAAGAGAAAATACACAGACACATAATGGCTAACAGTGTTTCTTTCATTCCTTGTTCTAGAGCTAACCACTCTAAAATTGTTTGGTAATGTCACTTAGTGTAATTAATTGTAACATATTCTTTTAAATAAATTGATTTATTGATGAAACT EMBV3_39641 AGAGTCTGTGTAGCCCTGATGTGAAAAGCAAGCCAAAAACCCCAGGACCCAGAACCTTCC Gene BVT0102_108193 + 0 NULL GK000002.2:136098120-136125303 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107043 1 XLOC_062969 NonCoding TCONS_00107043 XLOC_062969 NonCoding NonCoding - 2:136103656-136106551 - TSS78674 2895 3 TCONS_00107043_10 113 0.153022452504318 1 0 4.69971501840037e-06 9.71868791415505e-05 4.15550300360338e-05 0 8.01545230345373e-05 2.84187593681869e-05 0.000241699051995253 2.04308641492671e-06 0 0.000198415062766614 0.000329737639166006 0.00023590860306838 0 0 5.08414671118822e-06 0.00237202587818563 5.73482076000864e-06 8.66697891914299e-05 9.16492800930724e-05 0 0 0.000322971482451641 0.000589421339934852 0.000694907693325867 0 0 8.09555121825388e-06 9.8664838527094e-05 6.47022202618033e-05 8.30707657787796e-06 XM_005203268.1 PADI2 PREDICTED: Bos taurus peptidyl arginine deiminase, type II (PADI2), 0.0 4594 100.00 0.879447322970639 XM_005245727.1 PADI2 PREDICTED: Homo sapiens peptidyl arginine deiminase, type II (PADI2), transcript variant X1, mRNA. 0.0 1063 71.29 0.773747841105354 0 noncoding 0 0 0 0 -0.00865559544308559 0.953571799367583 -0.0676316794102543 0.255092803456263 ATCACACTCTTGGCCTCTTCCCTTTTCTGGTCCTGCTCCCTGCGCTCCCTTCCTGGTTTCTCAGGGAGGCATTTCCTTAATAAGTCACTTGTTCCCAAAAGCTCACCTTTGGCTTTCCTTCTGGGGAACCCACCAGAAAACAGTCAGACTTTATTGTGGGTGTTGGTCTTGACCTTGGGTGGTGGCCAGGTACTACACATCCATCGACTGTGTGGGATTCCAAACCCTCGGGGTACCCTTCCTGAGACCCCTGGTTGTGTGTGTAGAAGGGCAGCGACCACAGGGCCAGGAGAGGGCCCGTGTGTGGCCATGAAGCAACCATGAACATCACACCAGCAGCCACAGGACTTCCCTCCGACCATTTATTTTGTTGCTGCTTAATCAGGCTCTTTCCCAACATGTCGCCATCTCCAGCATCGCCTCTCGTCCAGAAAGTTGAAACCATGCCCCGCCTCTCGTCATCTTCACAATACCCTCTGCTCTCTTATTTAAAAGATTTCAAAGTAAAGATCGAAACAGGACCTTGGCTGAGTTTTGCAACACGGGAGTGTATTCTAGGCCTATGTTTATAGAAGGTGGTGGGTGGGAAAGAATCACAAGCCCAGGGATGCTGGGGGGATATCCACGGCAAGGGCAGTCACACGGGTGGGCAAGCAAGACGGGGAAGGCCGTCTGAGGCCTGGGGGCTTCAGAGTCATCAGCAACTGCTAACTTACTGATGGGGAGAGCCTTAGAAAAATCCAGAAATACACACCGTCTCCACACGGGAAGTGCGCGCTTCCCCTTAAGGCAGACTAAAAAAGAAAAAATGAAAGCCCCACACACACATTAACCAAGCACAAAAACACACAGCAAACTCTAAGTCTCCAGATAAACATTCACAAATAGGCACTTGGTGTCTTCAGCTCTGGGATTGGAGAAACCTGGGGCTTGGGCCCCAAAGGCAGGAGCCGCTGTTCCCAAAGCGGGAACAGCAGCTTCTGAAGGCACTGGGGCCCCATCTGCTGGGGGGCACTGGCCCCGCTGGACGGGCAGGAGGCTTGTTTAAAGAAGACCCACCCCTCTCATTTCACTGCAACAGCGACTTGTGGAAGCTCTGCACCCTGTGCATTCCCTGAATATAGTGAACTGGTATTTCTAAAGAGTGCATCACTGAAAGGGCAGATGCGGACATTTAAATGTGGGTGGCTGCCTCCTGGAGGCACGGGCAAGGGCCAGAACCTGCTTGCTACCGGGCCCTGTACCCTCAGAGCCCACCACTGTGCCCGGCACTCAGACACACAATACAGGTTTGCTGAATGAGTGAATAATCCAAGATCTCATTCTTCAGGAATCCAAATTTACAACCTTTTCATTGGTTATAAATCAGTTCCTTTTTAACTCTCGAAGTGGAATTATAATTCACTTATTCTCTGAAGTCAGCTGGCCTTAAAGGAAATTTTAAAGCTGAAACTAAGTCTTTTCAGTGGGAGCCAGAGAATGAATCTGATTATGTCCAAATGAGAGGATTTTCAGCATGTACTAATAAACTTCAGTGGGGATCATCGGTCCATCTCTAAGGCCAGTATCTGGCCCAGAACTGGCTGTTGGGGCTGGAGGTTAGGGCAGGGTCTTTATGTCTTGTGCCTGACATCTGGAGAGGAGAGGTGGGTCTTTAATTGTGTCTTGTGGCGGGGAGGTCTGAGTGTGGCTGGTGGGGAAGAAGTCCTTGTCTAGCTGCCTGGAGAGACGGCATCAGAGCAGGAAGTGGAGGCCATGAGAGGAGATGGGTCAGGGGCGGCCAGAGAATCAAGAACCCAGCAGAGAAGATGGGTAACACAGCTCACCCTGGGGCATCTTTGCACATGGAACTCTGGGGCCATGAGGATGCTGGGGTCGGGGCGGGGGGTGGGGAACTCCCAAACATCTGGGAGAGCCTGGGTCCATGAGAAAGATGAGGCAGAAGGAGCATCTCAGAAATGGAGAAGGCTGTGCTGATAAAATCTGCTGCCAGCGAAGGGTCTAAGCTCGATGATTGGACCCTCGGGGAGTGGGGAGCTGCCAGTGGTGTCTACACTGCAGAGGGCAAGCAAGGGGATCTGCGGCAGCCTGGAAAGGAATGAATAAATGGGGTGGCCCCCTGGACAAACAGCAGTGGATTTCAAAGGATGACGGCAGTTCTAGGTACACCTGGATCCCAGAATCCCCTCATGCCGGCTGCCTTGGCCCTCGGGGCACGGCTGCTGGGCAAACTGGCCGTCCCAGAGCCTCTTCCCGTCTCCTCTCATTCCGCTTTGGACAACAGACTAAAGACTGGGGAAGGTTCTGGGTCCTGGGGTTTTTGGCTTGCTTTTCACATCAGGGCTACACAGACTCTGGCCAAACGTTCAGCTACTTTCAGGACGGTCCACGTGGAGGGTCACGGGGGGAGATGACATTGTGGGTGCTGAGGCCCTTCTGAGGGAGGCAAGGCACGGATACCCCACACCCCTCCCCAGTGCTGGAAGGCCCCTCAGGGGCGGCCCGCAGTCCAGTCCAGGCAGGGGGTGCTCTGGGGGTACGAAGAGTCTGGAGAAGTCAGGGAGGGCGGGGGCACCCGGGCCCCTGTGGTGTCAGCCCCGACAGCTGGGTTTCCTCCTTTTTGTCATACAAGCGCCTGACTCGGCTTTGGTTGCTGAGTACTCACTTCAAACATGGTGACCTTGAGTGAACACACTGCCAGCTACGTGACCAGGTAAGGAGCCAGGCCGCCTCCCCTCACTGAGGCCCTTTCTTCTAGAGATCTTAGTTGATTCTGATAACTGACAATTGGGGCTACCTTTTTTCCCCCCTCTTCCCTCGCTTTAAATTTCCACTCTCCCATTTAAAATTCACCAAGAAAGAGAAAGCCCTCGAAAAACCAGACCCCCACCCTCA TCONS_00104244 r 3' 4719 TCONS_00104244 r 3' 7613 EMBV3_04896 GCTGGGTACCTTCTCGGACCACATGCGCTCGACAGCCACAGGTCATTTCAAGACAAGCAT Gene GeneID:280799|GAL:NM_173914:206_cdna Constitutive 0 NULL GeneID:280799 29 GENE GAL GALN MGC148823 galanin prepropeptide EMBV3_08917 ACAGAGACCCTCGCAAGTTCTTCATGTCAGGCTTCACTGGTTATGTGCCCCGTGCTCGCT Gene GeneID:507810|LOC507810:NM_001038513:32_cdna Constitutive 0 NULL GeneID:507810 8 GENE LOC507810 MGC133833 hypothetical protein LOC507810 EMBV3_05292 GAGATGACCTCGATGGACAGTGACGAGGAGACAGTCTTTGAGACAAGGAACCTGAGATGA Gene GeneID:616355|LOC616355:XM_002689147:143_cdna Constitutive 0 NULL GeneID:616355 7 GENE LOC616355 NULL hypothetical LOC616355 EMBV3_40607 GGACCACTTACTCGGTAGTACTCAGTCCATCAGAAGAGTCCTTGGAACAAGCAACTGGCT Gene GeneID:508312|SFRS2:NM_001034318:362_cdna UTR3_Alt 3 NULL GeneID:508312 19 GENE SFRS2 MGC127100 splicing factor, arginine/serine-rich 2 EMBV3_19554 CTGGGCTGACCCAACACACTCACCTGCTGTCGCTTTGGCTTCCTCTTGAAACATCAGAAA Gene GeneID:505200|CCNF:NM_001098870:66_cdna UTR3_Alt 2 NULL GeneID:505200 25 GENE CCNF MGC157179 cyclin F EMBV3_04863 ATAACACTATATTTATTTTTGGGTTTGGCGAGGGAGGCGCAGGGACATGGGGCAAGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29995 CAACGTCCTTCAGTGCTTCAACCACAGCACGATGGCTGAGGGCATTTCCAGAGATAGGCA Gene GeneID:507779|ANKRD16:NM_001075331:23_cdna Constitutive 0 NULL GeneID:507779 13 GENE ANKRD16 MGC143369 ankyrin repeat domain 16 EMBV3_10882 TGATGGCTTTCCATAATGGCTCAGGGGTAAAGAATCCGCCTGACAATGTAGGACACGCAG Gene BVV0102_202777 + 0 NULL GK000018.2:35957937-36008039 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083004 TCONS_00083005 TCONS_00083006 1 XLOC_051159 Coding TCONS_00083005 XLOC_051159 NonCoding Coding ZFP90 18:35999695-36009174 j TSS62488 1278 2 TCONS_00083005_4 71 0.360719874804382 5 0.865688963916438 0.000883182163390684 0.00134912695108515 0.00080458143164377 0.000532944949610334 0.00155246200287159 0.00142827493554258 0.00148206649034816 0.00102557275108217 0.00155011780730279 0.000914493828905558 1.15688256122843e-05 2.921699362573e-06 0.000578670623835172 0.000489539527024068 0.000720525204541385 0 0 0 0.00137104441826966 0.000556641352702999 0.000655343780244018 9.73933270949892e-33 0 0 0.000628990736582229 0.00118792536129376 0.000280167517479977 7.51495896045387e-06 1.13952584098358e-05 1.88143666097446e-05 XM_005195282.1 ZFP90 PREDICTED: Bos taurus zinc finger protein 90 homolog (mouse) (ZFP90), transcript variant X4, mRNA. 1e-109 401 99.56 0.17527386541471 0 noncoding 0 1 1 1 0.00164038610933767 0.988101698282514 0.0431779569851685 0.468672309376322 CCCAGTGCCTTTTAAAAGATTTTTAAAATATTTCATTAATTAAATGGATGTGTGTTTGTGAGTTCTTTAGAGGAAACCCGCTAATACTAGACTTGCGAGCTCTGACTCTGCTTCGGCCTCTTCTAACTCCTCAGCTTCTTCTCATAATCAATTAATTCCAAAGCCTCTTAACTGTTGTGAGCTACACCCATGACCCATCGCCCCCGGGGAATGAAGTTCAGTCATTTTCCACTGCATCCACTTACTACACAAATAATGAAAATTCAGCCTGCTCTCCTTACACTCCATCATCCTGTTCTATAATTCCCCTTTCTCTTTCTTTGGGGAGGCCTTGGGGTAGTTTATAAACCCTCCCCTTCTGGGGGGCTCTCAGGGTTTTCTTTCTCACATTCTTCTGGCTGAGGGTGTAGAACCTCAGATTCCCCACTAGGTGGAAGGCTTGCTCTTCTGAAGAATTCTTCCTTTAATCTCCTCACGTGGGTGTGTGCTCAATCTCATAAATCACGTCTCTTTGCAACTCCATGGACTGTATGTAGCCTGCCAGGCTCCTCTGTCCAAGGGATTTCCCAGCCATTACTGGAGCGGGTTGCTTTTTACTCTTACAAGCGATCTTCCCAACACAGAAATCAAACCTGTTTCTCCTGCGTGTCCTACATTGTCAGGCGGATTCTTTACCCCTGAGCCATTATGGAAAGCCATCATGTATAACATACAGCAGTGTTAATGATATAGCTCATGTTGTACATTACATCTCTAGAACTTACTTATAACTGGACATTTATATCTCTTGACTGCCTTTATCCAATTTCCTCTCCCCCCTACCCTCTGCCTCTGATTCCACGTACAAGTGAAATCAAACAGTATTTGTCTTTCTGTGACATATTTCACCTTGCATAGTGCCCTCTAGGTCCATCCATGTTGTCAAAAATGTACCAACTATTTCATCAAGTATTTTAGTCGTAGTATATGTGGTCTGGGGAGTCCGTGTCCAAGCCTTCAGCACTGACCCACGAGTGAAGACGGCACAGAAGAGACAATGTTGCCCCGTGCCCTCCACTGTCTCATTCCTATGGCTGAAGTCAACCCTGTCCCTGGGAGCCCTGCCCGGCGACCCAGGGATGGCCCCGAGGCCTCCGACGGCCAGGCACCAGGTATAGTAATGCACGTCCCAGGATGTCCAGCCTTCGACTTAATTAATATGATACTGATTTGTGAACCTATTTATTCTTGTGAGAGAGGAGGCACTTTCTAGAAGCATCCCAACTCTGAGCTTACCCA EMBV3_05356 CAGGCCACACCTTTGTTCTCCTTCAACAGCTGCCTGACAACCTGCTTCCCCACAACAAAA Gene BVT0102_069925 + 0 NULL GK000007.2:53227849-53242015 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213491 1 XLOC_130467 NonCoding TCONS_00213491 XLOC_130467 NonCoding NonCoding HBEGF 7:53226060-53230362 x TSS159928 2418 2 TCONS_00213491_3 93 0.351116625310174 2 0.43827016972797 0.00064578638610478 0.000287601071860061 4.97527366826691e-05 0 1.50116983537882e-24 3.69836424728632e-05 4.82358128880328e-05 0.00111035691419364 3.27430276816902e-05 5.05175400754221e-06 0 0 0.000153075895017269 1.55632306302077e-05 6.26135680944224e-05 0.000202151278965396 0.000118663164879653 1.76279760969991e-21 7.34941148200673e-05 0.000103026310849666 1.3810186898922e-05 9.20678357564148e-06 1.76445557860617e-17 1.01010486261746e-05 0.000234959973601862 0.000180652548636914 0.000325911306101287 4.14711836153059e-19 0 1.19829659720242e-41 XM_005203203.1 RCC1 PREDICTED: Bos taurus regulator of chromosome condensation 1 (RCC1), transcript variant X1, mRNA. 1e-43 183 79.82 0.0901571546732837 0 noncoding 0 0 0 0 -0.882241363637218 0.0179644677477628 -0.0514029227281081 0.294478500576974 CAGGTCTGCGAGGTATGAGGAGCAGCTGTGTGGGTGGAGAGTGAGTCACAGCCCAGCTCTGCCCTTCCTAGGAGAGGGCCAGGAGAATCCAGGTTGTTCAGGCCAGGGGTGATCCCCGCCCCCTTGGAGGGCTACTGTGAAAGGATGGAAGGTGAGAGCCCAGCCTCAGCTTTGGAGTGGACAGCACCTAAGGTAATCCCTGGGTAAGGAAGAAGAAGAGTGGCAGAGAAGCAGGCAGAGTTAGAACAGGCCTGGTCTCTTCGGTTATCCGTGCTCTAAACTAGAGATCTCCGCCCATGTCTTCTTCTGAGTTTCAGAAACCTGCTTCTTTGCCTACCCACAAATCAAGGAGTAAATAATAATTAATTCATTTATCATTTAAAAATTAAACACATGAATGCCAGCAAGTGCAGCTGCAGGCATCTGGTATCAACCCAGCAAAAGCAAAGGAAGTTAGTATTCTTCCATCCACTGGAGTGGCTTCTTTCCATCTTTGTCCCAGATGACATAGTCTCCATTAGGATTTTTGAACTCTGGATTATAATTCCCAGGCTTCTGGGATTGAAGAAACACAGGCTGTGAAACAAGCCTCATACTTTTCTTTGTCTTTGAACGCCATCTTCTTCAACAGAAAAGCTGAGCCCCCTCCCACAGGACCCAGCTGGCTGGCCTACGTTGCCACCTTCAACAGGTGCCAGGAGATTGATGTGTTTCTCTAACAATCTATGTATTTTTACAGAAATCCTCTGGAGTCAATGTCCTGACCCAAAGAAATAACTCTCAGTAGGCATTTCAGCTCCCAGGGACATGCTGGGGCGGGAGTTGTATGACACAAGGCTGGGTTGGCATTCAGAGCCCTCAAATTGTGCCAGATAGAGCTGCTTGCCTGCTTCAGCCCATGTGTAGGGATAAAAACAGGCCTGCTATTTATACACAGCCTGTTCCACTCTCCCTCCCCATCCATAATTCTGCAGGAGTCCATGGGGCTCTGGCTTCTTAACTTGCCCCTAGCAACTACCCCCAGGTTTAGGTTTCCACAGTGCCCTGGAATCACTATAGACCTTAGCTGGAATCCTGACTTGGCTTCTTACTGTGTGACCTTGGACAAGATGTTTAATCTCACTGAGTCTCAGTTTCCACGTCTCTCAAATGGGAATAACAAAAATAATAATGCCTACTTTATAGAGAGCTTCTTGAAGATTGATCAAGGGAACAGACATGTTCTAGTAAATGTGCCATATTATTATCATTATTATTACTAAGCATTCTACATTGACCATTCCATTTCCTTAGAGACTTCTTTTCTCTCCCTTCCCCACAAGTCTGAGGCTTCATGTGTGGTTGGGCTGGTTTTAGGAGGAAGCTTACCTATCACCTATTTGGCCAAGCGCCACTGTGGGATTGTTCCTTTGGGTGATCAGTATCGGGCCTAGGACCTCAGTAGACAGTCACCACCCAGGCCACACCTTTGTTCTCCTTCAACAGCTGCCTGACAACCTGCTTCCCCACAACAAAACTGCCTCAGGGTTAGGGCTCTCCCCAGGGGAGGGTGGGGGGAACACTTCCTGACACGCAGCCAGGTCACCCCTCCCCCGGCCCCTGCCAGGGCCACACCCTGCTCTCCTGTCTCAGCCTGCCTCTCACAGGCTCTGTCCTTCCGCCCTCTCACCCTCACATCAGTCGTAGCCCATTCACGGGGCAACTCCAAGTTTTCATCACACCTGTGAGCCTCACCCCAGCTACGTTTGTATGTCATTCACTTTTTACAGGAAGGACCTGGAGAAAGAATTCAAAAGGCCTGGAATGGTTTGGGGACAGTCACTTCTCTCAGAACTTTGAGTGTCCTCTAATCTGAAAAAGAAATCACGGACTTACCTGGTGGTCCAGTGGTTAAGAATCCACCTGCCAACGCAAGGGACACAAGTTCGGTCCCTGGTCCCAGAAGATCCCACATGTTGCAGAGCAACTAAGCCTGTGTGCCACAATTATTGAGCCCACGAGCCCCAACTACTGAAGCTTGCGGCTAGAGCCTATGCTACGCAACAAGAGAGTAGCCTCCACTCATCACAATCAGAGAAAGCCCACGCACAGCAAAGATCCAGCTCAGCCAATAAATAAATTAATTTTCAAAAATAGAAAAAGGAGGGGCTTCCCTGGTGACTCAGTGGTAAAGAATCTGCCTGCCAACGCAGGAGATGCGAGTTCAATCCCTGGTTCAGGAAGATCCCACGTGCCACAAAGCAACTAAGCCCAAGAGCCACAACTCTTGAGCCTATGCTCTAGAGCCTGGGAGTTGCAACTACTGAAGTCTGGGTGCATAGAGCCTGTGCTCCTCAACAAGAGAAGCCCGCAGTAAGAAGTCTGCACAACAACGAACCCAGCAGAGCCAAAAATAAATTAAAAATATTTAAAAAATAG TCONS_00217162 r 5' 310 TCONS_00217161 TCONS_00217162 TCONS_00217163 r 3' 1090 EMBV3_35305 CCTTCACCAGATCACACTTGCCATATCTGAGCTAAGTGTAACCAGAATTTACTGCTCCTA Gene BVT0101_015190 - 1 EMBV3_25847 GK000021.2:45794112-45794780 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26567 GGGGCCCTCGGTTTAAGAAACTAGCGGACTTGTACGGTTCCAAAGACACTTTTGATGACG Gene GeneID:785475|CDH11:NM_001081624:486_cdna UTR3_Alt 2 NULL GeneID:785475 18 GENE CDH11 MGC152019 cadherin 11, type 2, OB-cadherin (osteoblast) EMBV3_27436 CTGCAGTGGTTCTGGCAGTCATCCTGGCAACTTGAGTTATGGCTCCACCATTTATTAGCT Gene BVV0102_215251 - 0 NULL GK000005.2:30692264-30728349 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26098 TTTTGCCCAATATCCAGGCCGTGTTGCTCCCGAAGAAGACTGAGAGCCACCACAAGGCAA Gene GeneID:100297758|LOC100297758:XM_002686054:277_cdna Constitutive 0 NULL GeneID:100297758 3 GENE LOC100297758 NULL similar to histone cluster 2, H2aa3 EMBV3_17071 TTTTAGGCAGGTTTAAAAATACTCATCATAGATTCAGCAGAAGTGGCTGAGCTTAACTGC Gene BVV0102_191399 + 0 NULL GK000030.2:38590530-38597969 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28012 GGCATCAGAATAGAAACCAACTGGCAGCTTTCCTTGACGAGCTTCTTGACACATGGACAC Gene GeneID:514013|APBB2:NM_001076847:23_cdna Constitutive 0 NULL GeneID:514013 6 GENE APBB2 MGC139640 amyloid beta (A4) precursor protein-binding, family B, member 2 EMBV3_33225 ATGTGATTCAGTATTTGCTCCCTCCATAGGGGCATGAGTTTAGGGGAGAAGGGGAGACTG Gene GeneID:493999|DIABLO:NM_001045882:51_cdna Constitutive 0 NULL GeneID:493999 17 GENE DIABLO MGC134245 SMAC diablo homolog (Drosophila) EMBV3_29633 GGTATATTTATAGTTCATTTTGGGGTCTTTATGCCCAAGGAGAATTCTGCATTCCAGCAT Gene GeneID:521004|SLC39A10:XM_002685505:26_cdna Constitutive 2 NULL GeneID:521004 2 GENE SLC39A10 NULL solute carrier family 39 (zinc transporter), member 10 EMBV3_43245 TATCATAATCTCTCAGCTGATGAATGCAAGGCACCATCAGAGAGGCAGTTGCGATATAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16716 TGATCTTTGGTGTGGAGGTGAAGGAGGTGGATCCCACAGAGCACATCTACGTCATGGTCC Gene GeneID:100337266|LOC100337266:XM_002699641:122_cdna Constitutive 0 NULL GeneID:100337266 X GENE LOC100337266 NULL melanoma antigen family A, 9-like EMBV3_04804 AGCTGCAGGAGACCCAGCACCTGCTTCATGGTGGCCTTAGACATGCATCTGCCAGCATTG Variant GeneID:534354|MTRF1L:NM_001046378:12_cdna 301^564 5 EMBV3_08425 GeneID:534354 9 GENE MTRF1L MGC137648 mitochondrial translational release factor 1-like EMBV3_02236 CTCTCGCACCACCCACGTTTTCCCCCATTCTGTATCTGCATTTCTACTTCTGCTGGTTGA Gene BVV0102_093211 - 1 EMBV3_41042 GK000014.2:24921502-24955075 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34345 AGGCAGAGTGCTAGAATCTCCGTGGACAGTGATAAGACAAAAGCAAGGTTCCTGAGATGG Gene BVV0102_056760 + 0 NULL GK000001.2:74793632-75101222 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20565 CGAGGACATCCTGGAGGAGATAGAGAAGAAGCTGAATATCTACCACAAGGGGGCCAAAAT Gene GeneID:615854|NELF:XM_002691691:18_cdna Constitutive 2 NULL GeneID:615854 11 GENE NELF NULL nasal embryonic LHRH factor EMBV3_00700 TACCAGAAATCTGCAAGTTTCACAAGAACAACCCCAGTCAGATGGTCCCACCCTCCAAGC Gene BVT0102_385538 + 0 NULL GK000005.2:113569980-113570338 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193558 TCONS_00193556 TCONS_00193559 TCONS_00193560 1 XLOC_117513 Coding TCONS_00193560 XLOC_117513 Coding Coding FAM109B 5:113565389-113574388 j TSS144629 3768 2 TCONS_00193560_1 262 0.0124734607218684 6 0.581907090464548 4.67670964922627e-08 5.90822133615487e-05 9.12495773189036e-05 0.000101731484106406 2.16459506198447e-12 2.3912032706722e-05 8.48245842643632e-05 4.3672038181013e-08 4.49337632770541e-05 1.62861032819858e-05 7.46486912322173e-05 1.31979937525343e-05 1.98364358775624e-115 1.83892064574848e-23 2.59130088523748e-05 0.000480254694162823 0.000275113253844621 0.000115356964159692 8.50725272560319e-05 7.29398442819783e-05 4.02520799033128e-237 7.55508026284565e-05 0.000332954489939907 0.000307334453843602 0.000116624327504766 2.68865082029782e-08 1.55509309814832e-08 3.44036144404571e-05 3.87440512881209e-05 0.000148685841462083 XM_005207378.1 FAM109B PREDICTED: Bos taurus family with sequence similarity 109, member B (FAM109B), transcript variant X1, mRNA. 0.0 4390 100.00 0.645700636942675 NM_001002034.2 FAM109B Homo sapiens family with sequence similarity 109, member B (FAM109B), mRNA. 0.0 1236 77.14 0.419585987261146 TCONS_00193560_1 sp|Q1RMU7|SESQ2_BOVIN SESQ2_BOVIN Sesquipedalian-2; 0.0 523 100.00 0.984732824427481 1 coding 0 0 0 0 0.154267048630185 0.456552337795977 -0.00792106433890619 0.878378093910789 GCCCCGAGTCTGCGGTGCTGGCCGCGGAGCTCCCGGTGTCCTGGAAACCACGTGGTCAAAGGGCTGAGCCGTGTGGCCAGACAAGAGAGACCCCCACCCCTGCCCAGGGAGCTCTGCGGTTTTCATGGGAGCCATGAAGCTGAACGAGAGGAGTGTGGCCCACTACGCACTGAGCGACTCCCCGGCAGACCACACAGGCTTCCTGCGCACGTGGGGAGGCGCAGGGACGCCACCCACCCCCAGTGGCGCTGGCCGAAAGTGCTGGTTTGTCCTCAAGGGCAACCTGCTGTTCTCCTTTGAGAGTCGAGAGGGCCGGGCGCCTCTGAGCCTCGTGGTGCTAGAGGGCTGCACGGTGGAGCTGGCGGAGGCTCCCGTGCCTGAAGAGTTTGCCTTCGCCATCCGCTTCGACGCTCCTGGGGTGCGCCCACACTTGCTCGCGGCAGATGGGCCGGCGGCCCAGGAGGCTTGGGTGAAGGCGCTGTCTCGGGCAAGCTTTGGGTACATGCGCCTGGTGGTGCGCGAGCTGGAGAGCCAGTTGCGTGAAGCCCGCCACAGCCTGGACCTGCACCGCCGCTCATCCTGGAAGGCCGTTTCCAGCCGCTGCAAGCCCCAGGCTCCTGACCGCTGGTCCCCTGGCCTGGAGAACGGCCACTCCCTCTCTAGAGATTGCAGCCCAATGGGCTTGGTGGAAGAAGGGGGCAGCCGGCCAGCAGGGCGGGGCTTGGCCGAGTGGGAGCTGCAGGGCCCTGCCAGCCTCCTCCTAGGCAGGGGGCAGAGCCCCGTGTCCCCTGAGACCTCCTGCTTTTCTACCCTGCATGAGTGGTACGGCCGGGAGATTATGGAGCTGAGGCGGGCCTGGCTGCAGAGGGCCCAGGAGAACCAGCCAGAATGCAAGGACCAGGACAGACCCTGAGCCTGGGCCCTTCGGGTTCAGCCCTTGTCCTGCTGGTCAGGATGCCAGGGCCAGTGCTTTTTCAGGAGTTTAAGGTTTTATAGGTTCTTTTTTTTTTTTTTAAACTGGTTTCTGAAGTTGCTTTTGAGGTGAGCATTCTGCTTCCTGCTTTTTAGGTTTTTCCCCCAGGTTCCAAGTCCACCTTCATGCCTAGAGGGAACTGCAAAATCATTAACTTTCAACCCATTTATTTCCTGAGGCCCAGAGAGGAGAGGTGGCTTGCTCAGCAGTCACAAGGCAAGACTCAGGCCTGCTGACTCTGCGCTGGACTGCCCCTCTCTCAGGGGATATTAATATTAATGAAGTGGGTAATATCACATGACCACAGGTCACTCCACCTTCACCTATACGATTCTACAGTTTCCAACATGGGGAATCTTGTGTAAATACCCGAAGTTGCCTGCAGTGTTGGCTTGAGGGATTGACACTGTCAGAAAAAGTGGACTTACTGTGTCACAGGGGTTTCTGGGGCTTGGCTCCTCCTGAGTGGTGAGAAGATTGAACATGGGACCCCTATCCTGCAGTGAAGACAGGGCTCTTTGGTGAGACAGGGCCTTTAGTAAAGAGGGATTTATCCTGATCAGAAAGTGTTAGGGCCCCTCTTCTTTCCCTGACTGCCCTGTCAACAGATGGTGCTGGTCACTGCCCCAGGAGGGGCCAGTAGCTTTTCTGTTAGCAGAAACTCTGTCCTCAACTCCCTGGGAAAGTCAGTGACTTTGAATTTCAGTCCTGGGCATTTTAGGAGCTTGGACATAGGATTCCTGGCACCCTGTGATAAACTCTTCTCTCTTGACTGGGCCCCTAAAGGTATTCCCGATCCAGAAACCCCTAGGAACTCCTTCAGTCTTTCTTATTACCCAGAGTGTATCTGCCAAGATCCTCTGGTTTCTACTGTCACCAGCATGGTGCCAAGCATTTTTTTTACCAGTTGTTCTGAGAGGCAAAGTGACTGGGTGGACAGGGCCAGAGGCCAATCAGCCTGGCATCCTGATTCTGGTGGCAGCGGCTGGATGGAAGATTCAGAGCCTGGTCCAGTATACACAATCTCTCCCTTAGCCTCTTTCCCTCACTGGGGTCTTATGAGGCCTGACGAGGGGCCAACTAGGCCTAGAGTCTTCAGCTTAAGAGCCTTTTTCAGTCCAGGAGGCTGCAATGCTGCCCAGGGTCCAGGACCTGCTCCGGGGAAGCTGGGTTTGTTTCCTAAGAAGAGGGGCTACCTTTCTAGCCCTGTATGGGAGCCCCACAGCCTGTGTCTCTTGTTTTATACGCAGATATTATAGGGTTTTTGGTTATATTTATTGTTACAGTGCTTTTTATACGATTAAAACACCATGTTTATTACTCGTATTGGTTCCTTTTTAGCAGTTTGTGTGAAAGCCCCCATTCCCCCCCTTTTCAGATATATATTCCCCCTTTTCAGATATATTTTACATTTGGTTGTACATAACATATACCGTGGCATGAAATAAATTTCCAAAATCATTTCAGTAGCACAAGTAATAAATTTGAATTGTATTTTTAAAGTGTTTAAAAAATAGTTTGAAGTTCAATTAAAGTGGTCTTTCATTTCAGTAACTCCCTGCTCGGCCAAGCCCTGGCTGCCCTGGGTGCGGGAACAATACCAGAAATCTGCAAGTTTCACAAGAACAACCCCAGTCAGATGGTCCCACCCTCCAAGCCTGGAATGAGGCGTGTACCCGGGCCTTGGCGTCATCCTCGTGACGTCACCATGTGCCGCAGCAGGAACTAGGTACACTGCGCAAGTCTGTGAGCCGGACCTCTCGTTTGATCCCTACAGACTCGCGAGGCTTGGGCGGCGTTCTTCCTGAGGGTGTCACTGGGGCCGGGCAGTGGGGTCCTGGGGCCCGGACTAGGGGCGGAGCTGGGAGATGGCGTCCGGAGCGGCTCGGTGGCTGGCGTTGGTACGCGTCGGATCTGGGGCTTCCCGGAGCTGGCTGAGCCTGAGGAAAGGTGGTGATGTCTCCGCCGGACGGAGCTGCTCAGGGCTGTGTGAAGAGTTACAAAACAAAAACAAATTCTTTTAAAGCTATTTTGGCCGTCGCAAGCTTACACAAAATGTCCTTCGGCCTTCTCCGCGTGTTCTCCATTGTGATCCCCTTTCTCTATGTTGGGACGCTCATTAGCAAGAACTTTGCTGCTCTACTTGAGGAACATGACATTTTTGTTCCAGAGGACGACGATGATGACGACTAACAGGGCCTGGAGGAAGGACAGAAAGGAGAAAGCCCTAACTTAAGAAATGGTGATGCTCGCAGCCTCTCCTCCTTTCCCATCCGTAGATGGGCCCGGGGACAGCCCTCAGCCTCCCAACCCCCGTGAAGACCCCTGCATGGTCTGTGACCACGGCCCAAATCCCCAGGCTCTGGGAGGTTCCCGGAGATGTGCTGTTCACTGAGCATAATCAGATCATGAAAAAACATAATAAACATCAGCTCTGTGTGACTGAATGATGGCTGAAGTCTCTGGAGTTGGCTGTAGCTGCAGTTTATTGTCCCTGCCGTCCTATCTCTATCTGCTGAACAAATAGGTCTTTGACTTACAACCCAGAGTCTTCAGGCCCCTGTCGATCAACAAAGGAATTTGGGGAACCTGGGACAAATTTTCATTATTTACAAAAGCCTAACAGCTGCACAGGCTACCTAAAGGCTGAAACTTTTGTGCTGAGTAACACTGGCTAGTTAGCACATACAATCAGAAGCAGCTTTGAGTGTTAAAATAAGTCCTTGAGAAATACCACTTTTTAGCAAAAGGTGGGTTCCTTAGCTGAAAAAATAATAAAGGGGTTGTTGGTACTG EMBV3_26100 AGGGCTGGAGTCGCCACTTGGCTTAGTTCTTAAGCGCCTCTCTGCCCTCCTTCAACTAGG Gene BVT0102_110357 + 0 NULL GK000013.2:75513726-75518034 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043982 TCONS_00043980 TCONS_00043978 TCONS_00043981 TCONS_00043977 TCONS_00043979 TCONS_00043975 TCONS_00043976 1 XLOC_026088 Coding TCONS_00043982 XLOC_026088 Coding Coding SLC12A5 13:75511712-75516215 j TSS32418 3688 2 TCONS_00043982_6 86 0.0558568329718004 4 0.181697023545091 0.00970081547497429 0.00476664880846691 0.0046899456456773 0.00327501701871963 0.00177791811701113 0.00248527341355314 0.000754308221580472 0.00243530169510195 0.000792635392403111 0.00198333631064305 2.194357448209e-05 4.14391418636253e-05 0.00117650313463042 0.00611760512528495 1.6401506113737e-07 7.62915752025773e-06 9.11677542066531e-06 0 0.00272364407490342 0.00346668504073002 0.00287993042558247 8.26204095446534e-05 9.09454023120795e-05 1.21149561519529e-17 0.00301282141649821 0.00435301328751561 0.000851023761434926 4.93194029808914e-07 0.000186697519375022 2.77544791947755e-05 XM_005214640.1 SLC12A5 PREDICTED: Bos taurus solute carrier family 12 (potassium/chloride transporter), member 5 (SLC12A5), transcript variant X1, mRNA. 0.0 5335 100.00 0.801789587852495 NM_020708.4 SLC12A5 Homo sapiens solute carrier family 12 (potassium/chloride transporter), member 5 (SLC12A5), transcript variant 2, mRNA. 0.0 3323 85.34 0.801518438177874 TCONS_00043982_5 sp|Q9H2X9|S12A5_HUMAN S12A5_HUMAN Solute carrier family 12 member 5; 2e-48 167 97.56 0.98780487804878 0 coding 1 1 1 1 -0.02779543456517 0.785535298817272 0.00894751063720664 0.894873157920018 ATTTCAGGATACAGCTGATGATGAGAGCTGGGGCAAACCTCCTAGGGTGTGGATGGTGGGTTCTCAGGGGTAATGGTGCTGAGTTCTCGTGGGGTAAGGCTGGCTGTAAGGTCTCTCCCGTGTGGGTAACGTGGGCCCACCAGCCCTCTGGTATTTGGATGAAAGCCCCACCCCAGTGAGTGGGGTCCTTAGGGCTGGGGACAGAAGAGCTCTCAGAAGTGGGTGACAGTACAATTGTAAGAAGTGGCATGTGCACTGACCAGTCAGAACTGGCCCTGAGGTAGAGCTCAGCTGGGCCAGGTGTCAACCCTTTGGTCGCTGGAGAGTGGGAAGGCCAGGGGTACTGGAGAGGAGTTGGAGTGGCCATATCAGTGGGGCAATAGCTATTTGGTGTGGAAGCATCGCAGTATTTTAACAACTGGTACAGGTCCCGAAAGTGCACATCCTGGCTTTGGGGGTAGCTCTTTGCAGGACATGGGTAGTGATTTCCATGGCACCAACTTGTGTCCCTCCCTAGATCCAGAGTATCACAGATGAGTCTCGTGGCTCAATCCGGAGAAAGAATCCAGCCAACACCCGGCTCCGTCTCAACGTCCCAGAAGAGACGGCTGGTGACAGTGAGGAGAAGCCGGAAGAGGAGGTATGCAGCTTGGGTAGTTTGGCTGCAACCGGTGGGAGCAGAACCTTTGGCCTCCAAATGAATCACGTGCCATCCCTTCTTTCATCCCTTAGGTGCAGCTGATCCATGACCAGAGTGCTCCCAGCTGCCCTAGCAGCTCACCGTCTCCGGGGGAGGAGCCCGAGGTGGAGGGCGAGGCAGATCCAGAAAAAGTGCATCTCACCTGGACCAAGGACAAGTCGGTGGCAGAGAAGAACAAGGGCCCCAGTCCTGTCTCCTCTGAGGGCATCAAGGACTTCTTCAGCATGAAGCCGGAGTGGGAGAACTTGAACCAGTCCAACGTGCGGCGCATGCACACCGCCGTGCGGCTGAACGAGGTCATTGTCAAGAAATCCCAGGATGCCAAGCTTGTTTTGCTCAACATGCCTGGGCCTCCCCGCAACCGCAACGGTGACGAAAACTACATGGAATTCCTCGAGGTTCTCACCGAGCGCCTGGACCGGGTGATGCTGGTCCGCGGCGGCGGCCGCGAGGTCATCACCATCTACTCCTGAGAGCCAGGATCAAACACCTGGGCCCGAGCGCGTCCGGCCCGCGGCCCCGGAGCCCTCACCGCGCCCCCCGCCGCTGTCACCGTTTACATACAGACCCTGTGCCCGCGCCCTGGCCCCCTTTCCCCGCTGCCTGAAGCCCGGAGGCCACGTCGGCTGGGGCGGACCCGGAGAAGACCTCCCCTCCTGGAGACCAGAGTCCCGTTGGCGCGTCGGCCCCCGGCCGCCCTTTTTCTAAGCCCGGCCTCGCCCCGCCGGAGGAGACGCTGCAATAAAGATCGGAGGAGGCTGCGGAGAGGAGCGGACCTGGGGCTTCGAGGACCCCCGGTCGTCCGCCGGCCCCTTCCCTCTCTTCCCGCGCCCCGCCCCGCCCGCACTCTGCGCCCCTCCCCCGGCGGCCCGGAGCGCGCGGGGTGGCGGGGATGCGCCCCGCCGTCTGCGTTCTACTTCCTTGCGCGGTTGCGGGCGCGAGCCGGCCGAGCGTATACATAGTGTACAGGAGACATCGCGTGTATTTTTAACGTCCCCATATTTCTGTGACTTAGAAGCGCAACGGACTTCTCGCCGCAGTCGCGCTCTCCCGCTGGGGGCGCGCCCAGGGAAGGCGGAGGCCTCGGAGGCTGGGTTTTCCTTGACGTCCGAGCGTTTGAGAGCAAACGTGCTTTTAGGCCCAGGCGGGACTCGTGGTCCCTCGACCACCCACCTCCTCGACGCCTCCTCACCTTTTCCGCGCGCCCTTGGCTTCCAACCCTTCTTCCCTCTAGATCTTTTCGGAGACGAAGTGAGACAAGTGTCCCAACTTTTCCTGGATTCGCCTCCCAGCGAATGTGAGCTTCCACTGTGGCTGCAGAGACGCGCGCAGCCTCTTCTCATCGGCTCTTTATGCAAGCTGGGGCCAGGAGAGGGGAGGGGCGTTCCTTAAGCCAGAGGAACCGAGAGAGGCCCTCGCCCCCGCCCCCAGGAAGCCCCGTCCCGGTGCCTTCGCTGGGGGAGCAGGCGTCTCTCCTCCACCGGCTTGTCGCCTGCTCCCCCTATCCCGTGGCTCTTCGCCAAAGACTGAAATCGGGGGGGTTGGAGGGCGTCCCCTCCCCCGGAGTTTCCTCCCTGGCACAGGTGAGGGAGGAGGGGGCGGTTCTGGGTTAGGGGCCGGACCCGCTGGGGTGGCCCCAGCTCTGCCCCTGACGTTTCCTACCCTGTTCGCATCCGGCAACTCCGGCCTCGGGGACCCGGCCGCCTTCTCCGCGTCTGGGGCCCGGGCCTCGCTGCCTAGCAGCGGCCTCTAGCTGCGTCTCCCAGGCACCTGGGCCTGGGGGAGGGCTGGAGTCGCCACTTGGCTTAGTTCTTAAGCGCCTCTCTGCCCTCCTTCAACTAGGGCCCAAGGCCTTTGGCTTCTCCAACACCAGTCCTTGGCGCTTCTGCTCCGCCAGCCCGGCCGGAGGTGCCCTCTTCCCTTAGAGAAACCCCGTTGGCCGGGTTCCCTTCCCCCAGGGCACGTTACTAAGGGGGGACATGCACTGCATGCTCGTTCCAGCGCCCTCTGGGGCTGGGTACAGTAACTCCAGCCCTAGGGCCCTGACTGCACCTAGTTAGACATCCCGTCCATCTCCCAGAGCTGAGGCTTCTGGGGACTCCTGACCTCACCACCTCCTTTCCTTTGAGCCCAAGGCAGAGCTGGCGCTGGTGCCATCTAGACTGGGTCAGGTGTGGCTGGAGGAGGTTTGGACGCCTGCGGTTAGACCAAGGCCTCTCTGAAATTTGATCAGGGGGCTGGATAGATTTTTCCGGGTAGTAATCAGAAGGTGGAGGTATTAGACACCAGCACTTCCCACCCCCATCCTCCAAGACCTCCCTCTGAGAACCACAGCTGGGTCTAGCCTTCTGGGGGCCTAGCACTCTCAGGCTGAAGTGGTGGGCTAGGCAGAACCGAAAGGGGGCTGTATTAACATCACTTAGGGAACCAAAGTTGCACTATCTGGGCCCAGGCTGTCTGGTTGGCAAGAGCAGTTTCCATTGATGAAAACAGACATCCCACAACAAACCCCCAAGTTTTCTGTGCTACATGTGCAATATTTGTTATGAATGTTATCACCCGTCACTCATCAACTTATCTTTATAATCATGTAGCTAGATGTTTCATGTCCATTCAAGTGACTTTTATTCTGAGTGCAATATTTCAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGACGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATTTATTACTATTATTAGGCCTGCCTTTAATTTTCAGTGTGTTTCAGTATTTCGCATTCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAAGATGAAAAGGAGAGGGTTGGTTCTTTCCTTTACTGTTGAATGCTCCCATTTAATGCTTTATAGCTTTTACTGTATTAATTTTTTAGACTCCCGTCTGCACAAAATGCAATAAAAATAATTTTATTATACCCTTC EMBV3_17017 CAATTATACAAAAAAAAAAAAAACCGGGGGGCAAACAAACCATAGAATGACACAGAACCC Gene GeneID:505320|ARIH2:XM_002697044:504_cdna Constitutive 2 NULL GeneID:505320 22 GENE ARIH2 NULL ariadne homolog 2 (Drosophila) EMBV3_13683 AGAGGAACAATTGGAGACGGTCGTTGCAGATTTCTCTGGCCTCCTGGAAAAGTGTTGCCA Gene GeneID:506011|AFP:NM_001034262:44_cdna Constitutive 0 NULL GeneID:506011 6 GENE AFP MGC128267 alpha-fetoprotein EMBV3_20220 CAGTCAGGCTGTGTTAGTCGACAGGACCATTTACATTTCAGCACAGCTAGGCATGGACCC Gene GeneID:613880|LOC613880:XM_002696257:30_cdna Constitutive 0 NULL GeneID:613880 20 GENE LOC613880 NULL similar to Heat-responsive protein 12 EMBV3_28034 ATGACCATCCTGTTAGGTCTCCTGTTTGGCCCTTGTCTATTTCATCTCTGAGAGGGGCCA Gene BVT0102_083013 - 1 EMBV3_39994 GK000007.2:22580778-22629691 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091375 TCONS_00212497 TCONS_00236492 TCONS_00073006 TCONS_00227591 TCONS_00212496 TCONS_00049203 TCONS_00236493 TCONS_00227592 TCONS_00110223 TCONS_00194097 8 XLOC_056150 XLOC_130205 XLOC_144487 XLOC_044774 XLOC_138276 XLOC_029334 XLOC_066127 XLOC_117668 Coding TCONS_00236493 XLOC_144487 Coding Coding - 9:102856484-102863499 - TSS177028 7015 5 TCONS_00236493_4 76 0.567925873129009 1 0 3.97645540875307e-15 0 0 2.17435036003478e-39 4.88687722887301e-55 0 1.03915038046126e-07 2.07140102044331e-23 9.3295249672518e-11 1.77299743298113e-06 3.09042650140296e-06 8.90300615628516e-08 1.32449227359043e-39 8.96038913629766e-07 1.25378282811598e-06 0.000756992824332693 0.000769003880254607 0.000384330000503998 0 2.39667605693256e-07 0 0.000324188999165058 0.00108171441641392 0.000940257489823256 5.65407226928089e-12 1.3924612576666e-24 2.87873794668579e-20 0.000126891872848127 0.000127231725590383 9.00267811896369e-06 XM_586393.5 LOC539314 PREDICTED: Bos taurus baculoviral IAP repeat-containing protein 2-like (LOC539314), mRNA. 0.0 901 82.67 0.125588025659301 TCONS_00236493_15 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 8e-17 75.1 82.93 0.625 0 noncoding 0 0 1 0 -0.0634763098661241 0.542062392107212 -0.00898073873661262 0.84383565110183 GGTCAAAAGGAGACACCGCGTGTCCGTCCACTTCCCAGAATCCCTCTCGCCAGCATCCATCTTGGCTGAGCGATGCGTGCACCACCAGGAAAGACTCTGAATTAGAATGATTGGCCAAAGACCACCCGGAAACTAATCCCATCACCATAAAACCGGAGATTGCGAGCCACGCGGCAGAGCAGTTCTCCTGTGTTCCCTTACCTATTGCTCTCCACCCGGGCGTCCTTTCCCAGTAGAGTTTCTTGCTTTGTCAGCACATTTGTCTCCTCGGACAATTCATTCCCGAGTGTTAGACAAGAGCCCAGTTTCAGGCCCTGGAAGGGGTCCGTCTTCCTGCAACAAATGGCGACTCTGGCGAGGACTCTTCTTTGCTGAGACTGACATCCCGACCACTCGGGGTACTCAGGGGCCAGCTTGCCTGCCAATGGACCAGACCCAACAGCCGTAACTGGGACCCTTTTGTCCCTGGTCTCCTCCTGACGCAGACAACTGGCCAGAGTGCCCCGACTGGTAAGGAACAAGAGACTTTATTGACCTCTCTCCCCTTCCCTCACTCTTTCTTCTCCAAGAGACTTTATTGACCTCTCTCCCGTTCCCTCACTCTTTCTCTCCTTAACCCTTCCTATCCTTCCCCGTTTTTCTAGTCCCCCGGTCCTGGACACAGGAATCTGGTCAAAGGACCTTCAGCCTGAGCTGAGGATTGGAGACTGATCACCTCCTCTTGGCAGAGAACTCGAATTCTGGTTCTGGCCTGGTCTGGTTTCTGGCAGGGCCGAGTTCCAGCCCTCTCTTCTCTGGAGGCCCAGGGGAAAGTCCCATAACGCCTGGGTATCTGCAGGTGGCAGGAGCCGTCTGTAAGGCCACCCCTTTCGCCCCCCTCTCCCGCCTCCTCCCGCTTCTTCTTTCAACCTGGCTTCCTTTCCTGCCTTTGAAATCTTTGATGTTAGTACTTGGGTCTGAAGTTGTGTCTCTATAGGAGGTTTTCTGAGAGACTGTATTCTTGTATTTAAGGGAGTGTCTGACGACATGCCAGGTTTACATGTGTGTGTTTTAACTCTGTGTTCTGTGTTGTGATTTTTCATGACCATTTTGCTTTGTCTGGCCGCCATTTGGTTTAGACCTGCCGCCATTTCGTTAGAACTTGATTTTCTTTCCCTGTGCCTTGAGACCAGGGCTCTCAGGAACACTTATCTAGACCATCTCTAACTCCTGAGATTGAGAGAAAAGGGGAAAAAGACTTTAAAATTTTTACTTATTTCAATTTTTTTTTATAAACTAGTAAATTTTATATTGTAATATCTAATTCGTGACTAAACTTAGAAAATGAAGCCAGATCTTGCACTGTGTCTGTCTAAATATGTCTTGGTATGTCTTTGTCTCTGGGTAATATTTTGAGGTTAATTTGTAAATGAGCTCTATTTATTTGGCTTAAAAAAAGTAAGCACTTACAAATCAAATAATTCTAAATTAAACAATAAATTCCAGGTTCATGTGAACTGGGAAATATTCAGTATTAAATACCTGATATTAATGTTTGTTTGTTGACCTATCTAATATAGACATGTCTTAGAGTAATTAAGTAGAATATTTTCATTGTACCTAGGTTTAATATAAGTTAAATATTATATCTGTTACAAGTTTATCAACAAGGAAATTACCTCGAGTGAAGAGACTTCTAAAAAAATGTAAATGAGATATGAGCTTTTATATAAACTCTATTAAGAATAATTATTCTTTAGAAATATCTGTCTAAAATAGTCTCTCCAGATTGGCGTAACTTAAATTTCTGAGGGTTGTGCCAAGTGTGCTAAGTGTTGGAAGTCTATTGAATAGTTAGGTCATTTCCAAATAAGATTTTGAAACATTTGCTACTAAACACTAATTTCCTTTTACAGAGAAACTAAAGAGATGTGGGACTATAAATGAATAATGCTTGGTGCCATCCTAAATGTTGTAAGAAAGCAAGGGTTTTAGAAATTATCACTGGTATTTATGCTCACCAATCTATAAAATGCTAATATAAAATTCTTGGTTGCTGAATGAAAGTACAAAGTGTGTTTTCAGTAAAAAAAAAAGAAAGAAAAAGGTATGAAAAATACTACAAAGAGTTATGCATGATCAGGATTTTCTAAAATTGGATTACAATTAGATAAATGAATTTTGTTAGATATGACACAGCCATAAGAAAACTGGTTAGAGTCAGCTGGGCCCAAGATGGCGGAGCTGACTCTCACTAGACTTTGAGCCGTGGTATTTACGCCCATTGTGACATATCAGCAAGCCCGTCAACACGGACTAAATCTGACCAATGTTCTAAACCCCTTTAATTGATCTTTTCCATAAGACTTCCTAAATAGAATTCTTTTGAAGTTCTTTCGACCTCTAGCTAACTTTGGGGTGCTTCAGAGGGCCCCTGAAACATCCCAAAGAGCGATATTAAACTGTGTTTATTTGGTTGGTTAAATTACATGAAAAAGATTATCAAATGAGTAATAAATCCGCTCATGTTATAATGTATGGTAAAATTACTAATACAGATATCCTAGAAATTATATGGTGTTCTTAACATTCTGATATGTCCTGGTATTCTAATGAAAAACCTGATGACTTCACAAAAGTTAACAGAAGGACTGAATGAACCAGTGAATATGCTTATAACTTTTATGGTTTCTATCTGAAAAATGATTGGTTTTCAGGGAGTAGGGAAAACCTTCCTCTCAAACGAATTATGACAATACTTTGGTAAAATTAAACGTTATAAACAAAGCCATTATATTTTCTCTCTATCTGACTCCTCCAGAAATTTGAAATTCTTAGGTTTCCAGTAAGTTTATCAAATGAGTTAGGAATGTTATGGGTACAAAAATCTCAAGAAATTTTTGAGAACTTAAAAAGGGAAGCATTCAACTAGATTTGTTAGGCAAAATCTGTTATAAGCCTTTGGTGTGAGTTTCCCAGCCCTCTTTTATTTTAAAAGTCCAGTCTGAGACTCTATAAATGTTTCGGCAAAATAAAAAGTCTATAGTCAATTATGGTTATATAAATCATCAGACCAAAATTAGTGAGAACAGACCTATTTTGCAAACAAACTAGCCTTAATTTGGTTATATTTGATTTAAATGAGGGTAATTTTAGGGAGAAAAAGATATTTCAAAAAATGTTAAATCCCAGTTTGTTAATGGGGGTCTGCATCTAGTAAGACTCATCTCTTAGATAGTTCTTTGCTGTTACGTGATATTAATGTAAAATTTAATTGAATTCTTAAAGAACACCCTAAGTTTGTTTCTGAAGCTTATTTCAGTTTGTTTCTGAAGGTTATCTATCTTTGGATGAAGATCAGATGCCTCATGACCTGCAACCAGGACTGGAAAAAGACATAATTTAAGGGACTGTCTCCAACCTGGATGGAAGGACTTTTTTACCAGGTACTCTTAACTAGCTCATGCACAATGAAACTGAAGGGAAATTAACTCTTAGATTATTTCCCACTTCCAAAGGCCCCTACAGTGGATTGGTCTATAGAGAAGACAGCTGACCTGATCTCACCTTAAAATGATGCTCAAGCAGGAGAAACTACACTACACCAGGATGAGAAGACGATGACATCAGAGGTAGGCAGCTTGCCCGAGATGCTGGACCTGATTCGTATGATCATTTATGTTTTCTTGACTTCTTAGACCTTTGCATATAAATCAAATCCTTTTCTATCATAGGCCTGATTCTATGCTAGTTTTAAAAATCAATTCAATTGTTGGGTTTGTGGCCAATTACCTGTGTCTAGTTCTGGGTTACCTTGTTAAATTTCTCTACTACAAGACTCTAACTGGTTGGCCCTGAGAAAATTTACTTAAAAAAACAATTATAGTCATATTCAGGTTACTGTGATGTTACTATATGGGATCCCCTCACCGGGCCAATTAATAATGCCTGCTCTGACTCTGGCCATAAATTTGAGCCTTTATCTATTACTCAAGCACAATCAGAGCAACAAGTAAAGTTTCAGCAAAGGAGGAAAAATCTACCACAATTATGGGATGGATTTATATAGATAACACCAGGCTATGGTAATTTAGGTTTAAAGTCTCCTCTGTGTTGGAAACAATTAAATCATACTAAGGATAATCACTCTAGTAACACTAGAAAACTGGGCTATGTGCCTTATAGACAGTGGTGCCAATATATAATTTCCCTAGAAGATAAAGATTCTACAGAGCAGACTAAGTCAGATGACCTGAGATCTACTGGGCTATATCTAATGGAAGCTCTTAAGTCTTCCTTGTGACTTTACTAATACTGCTGGCTATGTTCTTTGTATTTCACCTGTTTTACAAATTTACTGTTTCTTACACCGTCAAATGCGTGTGTGAGGCCTCTAACAGAATAATATATAGTGCCAATAAGATCGATGATGGTAACAGTGTAACTCTAGATATGGGGAGAAGCAACAAGACGGGATATTTTCCTGGACCAAGAGGCTGGCAAGACAGGTGGTCCAGAGAATTTTGGATACTGTTTCATGGCCTAGTCCAGTAACAGCACATTGAGTGGCCTGTCAACAAAATCTTTGCCAAACCTGAGAATGGACGTTCTCAGCACCGTGGGATAAAATGGTCATGAAATGCCCCCCTCAAAATCATGGTCAAGTTTATGAGCAAGAGAGGGCTCTGCCAACTGAAGACTGACACTTGCCGGCTTCATCTACAAAGATTAAATCATGGCCACTGAAACTGCTGACTTTCAACGCCCCTGAAAGGAGTTCAGGGTGAAAACCAGGAATGGGGCACTCTGTGCTCTGGGAAAAACTGGCATAACAGGCCTTCAGATAGTTATATCTTTTCAGGAGAAGATTTTATGAGTCCCAATTCTTGCATCTTCTCATACCTAGAGGAACACTGGCGTCATTAATGGTGAAATCTGCTTTGGCTAACTAGGTGATGCCATGGGTGTACTTTCCGATTAGACCTTGTGTTGCTAAACACTTGCGTTTTCTGAGTCGTGTCAGGCTTGGATGCCACCATTCTCAAAACAATGTCTGCTGGAAGCTGGTAACTGCAATCTTTTTATAAAACTAGGCAACTGGCTACAAGTCTCCCTGAAGTGCCAGGTCCAGACTGGGTTTCAGGCCTATTCTTCTAAAAAGAAATGAGATTTATTTTGTCTACTAAATTCCAGTTTTCACTCCTCCAACTACTTCTAATTGGGTCTGTTACACCAAAATGGCAGACCAAGGGACTGAGATTTTAATCATATAAGACTCAGATCTAGAACTTGGAACTCAGAAATACTTCCAATTCAGTGTTTATACTCCAAGCTGAGGCAGTCTTATGCTCCATTTTGACAGGAAGTTATTACAGTCATAGTTGCCTGCTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCCAACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCAGGAAAGTGAAAATTGAAAGTGAAGTCACTCAGTCGTGTCCGACTCTAGCGACCCCATGGACTGCAGCCCACCAGCCTCCTCCGTCCGTGGGATTTTCCAGGCAAGAGCACTGGAGTGGGGTGACAAACGCAGTAGAACTCTGTGGGGCTCTGGAGTGAGATCTGTTCTGTGTCCTCCATTTCTTGTCTGTAGGATATAGGCTTCATTCAGCCTCCTTGACCTTCCCTGAGCTCCAAAGGGTGGATTCAAACAATTGCTAATCAGGGAAGGGAGGGGATACAGAAACCGGAGAAACAATCAAAGGTTGGTGCAGCCTCCAGACAGAGTCCTGGTTCCTACTCAAAGGAATATGCAGAACAATGTCTTTGCGCCCCCACCCAGGTCGGGACGGTAACTTCAGACTGAACTCAAGATTCCTGGAGCACAGCTCTGTTGCCTCACCACCAACCAATCCAAAAGGGTCACAAACCCTGCAGCCCTCACCCCAAATGTTGCCTCCTGTTTCCGGGGACCAGAGATAACCATCCTGTTAGGTCTCCTGTTTGGCCCTTGTCTATTTCATCTCTGAGAGGGGCAAACAGTTTCAGACTAAATTGCTGTTATTATAACGGTGAATGCTGGTTTCAGGCAAAAAATAATCTTGACTTAGATCTGGTAGAGAAAGACTTCTGCTCTGCGAGGCAGGCTATGCCCATGCACAGCAGGAAGAAGTTACGGAAGAAAGAGACCTCCGCCCCAATTCCCAAGAAGTATCTTGAGTATGAAGTCTCTCGGGGGGAGTTGTTAGGGGAAGCACACTGATTGAAACCGCCCACCCTGGCCAGGCACCATAGTAACCATTTGCATGAGTTGTTTTATGACAGGAGATCCTGATAAGGAATACAGAACTAATGAGCCACCACCAACAGGAAGAGTTCGGGAAAGGTCAAAAGGAGACACCGCGTGTCTGTCCACTTCCCAGAATCCCTCTCGCCAGCATCCATCTTGGCTGAGAGATGCGTGCACCACCAGGAAAGACTCTGAATTAGAATGATTGGCCAAAGACCACCCGGAAACTGATCTCATCATCATAAAACCCGAGACTTCGAGCCACATGGCAGAGCAGCTCTCCTGGGTTCCCTTACCCTACTGCTCTCCACCTGGGCGCCCTTTCCCAATAAATCTCTTGCTTTGTCAGCACATGTGTCTCCTCGGACAATTCATTCCGAGTGTTAGACAAGAGCCCGGTTTCGGGCCCTGGAAGGGGTCCTCCTTCCTGCAACAATTCTAGGAATCAGCAAACAACTAAAATGGACTGGAATGAGTGAATTTAGCTCAGATGACCATTATATCCACTACTGCGGGCTGGAATCCCTTAGAAGAAATGGAGTGGCCATCATGGTCAACAAGAGTCCAAAATGCAGTACTTGGATACAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATATCACAGTAATCCAAGTCTATGCCCCAACCAGTAACGCTGAAG TCONS_00238213 TCONS_00238214 TCONS_00238215 TCONS_00238216 TCONS_00238217 r 5' 13987 TCONS_00238213 TCONS_00238214 TCONS_00238215 TCONS_00238216 TCONS_00238217 r 5' 13987 EMBV3_26062 GTAAGCTGTGTTTACAGATTGCTGGGCCAAAGAACTGTGCCGCAAAGCGTTCCTGTAGCT Gene GeneID:518085|NUDT16L1:NM_001034526:192_cdna Constitutive 0 NULL GeneID:518085 25 GENE NUDT16L1 MGC128877 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 EMBV3_40928 GATGACGATGAGCTGGATGGCAAGCTCAACTAATATTCCTTCTTTTATTCCCATTTGAGC Variant GeneID:327676|ARHGDIB:NM_175797:19_cdna 106^877 1 EMBV3_26153 GeneID:327676 5 GENE ARHGDIB NULL Rho GDP dissociation inhibitor (GDI) beta EMBV3_34279 TTTCTGTCCACAGGTAAATTAATGTCTGCTCTTCAATATCTACTCACACTTTCTTGGGGG Gene GeneID:531359|GOLPH3:NM_001075948:42_cdna Constitutive 0 NULL GeneID:531359 20 GENE GOLPH3 NULL golgi phosphoprotein 3 (coat-protein) EMBV3_14002 ACAGCAGAAAACTGGTATGCAGCTACTTGGATCTATTGATTCTATCTTTCTTATCGTACG Gene GeneID:533350|OSBPL8:XM_002687171:114_cdna UTR3_Alt 2 NULL GeneID:533350 5 GENE OSBPL8 NULL oxysterol binding protein-like 8 EMBV3_21429 CTCATTCTACAGATGAGGAAGCGGAGACCCGGCAACCTTGGGAAACACACCTAGGTCAGT Gene BVT0102_088298 + 0 NULL GK000016.2:49621019-49624530 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01881 AGGGACAGAGCAACAGAAGAGAGAGGGGTTGCCCTTAGAGAGGTCTTGGTGTTGGAAACA Gene BVV0102_257098 + 0 NULL GK000022.2:16490745-16494295 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126281 1 XLOC_077403 Coding TCONS_00126281 XLOC_077403 Coding Coding ZNF197 22:16470155-16494006 j TSS94766 7297 1 TCONS_00126281_10 1041 0.289434013978347 6 0.694297693920335 0.000311138808583787 0.000122441919500333 0.000240698152688591 6.76601239519342e-05 0.000184769312227645 0.000213389820936387 8.59693498949026e-05 0.000149786310021766 0.000703782691088754 3.71164908523121e-05 1.05323584494263e-50 1.03447824934219e-11 1.66762738532097e-06 1.98121175014206e-05 1.10723846579396e-82 0.000253742865344513 0.000173753178510112 0.000674786931452604 0.000123755021297996 0.000191489350004151 4.94349490164022e-05 1.87594380176339e-05 3.28759999462873e-05 2.00486916148133e-05 0.000492793917060607 0.000211808389083433 0.000368797350265157 8.69549767431762e-05 8.42879555714267e-06 1.62594117413043e-252 XM_005222460.1 ZNF197 PREDICTED: Bos taurus zinc finger protein 197 (ZNF197), transcript 0.0 7158 100.00 0.54378511717144 XM_005264783.1 ZNF197 PREDICTED: Homo sapiens zinc finger protein 197 (ZNF197), 0.0 4390 89.00 0.458270522132383 TCONS_00126281_10 sp|O14709|ZN197_HUMAN ZN197_HUMAN Zinc finger protein 197; 0.0 1959 91.24 0.996157540826129 0 coding 0 0 0 0 0.075100715296335 0.50595703089219 0.0172892312146345 0.744797477761487 CTGCCACCACTGGGAAAGCTAGGAACCATAGAGATGTGGCTTCCTAGAGAGCCGAAGCTGGGAGGTGGTGTGAGCAACCGGATGTTGCGATACCCGCGGGTCAGCCATTATTCTGGGCTTCAGGTCTTACAGATGATGTTCTTCGAACTCTAAGGAAAAAGTCAAGCAAGGATTGAGGGACCCTGGAGAGGAACCTGTCTTAAATGGCAACAATGACAAGAGAAAATTGGGCCCACAATGCTCTGCGACAAGAGGGCCTTGTTAAAGGGAAGGATGATACCTGGAAGTGGGGAACCAGCTTCCAAGGGAGTAGCTCCACTGTTTGGGAGACCTCCCACCTGCACTTTAGACAGTTACGTTATCATGAGACATCTGGACCCCAGGAGGCACTGAGCCGGCTCCGGGAGCTCTGTCGCCGGTGGCTGAGGCCGGAAGCACGCACCAAGGCCCAGATCTTGGAGCTACTGGTGCTGGAGCAATTCCTGAGCATCCTGCCTGGAGAGATACGGACCTGGGTGCAGATCCATCGGCCCGGGAGTGGTGAGGAGGCCGTGGCCCTGGTAGAAGAGCTGCAGAAAGACCTTGATGGACCAACATTAAAAGTTCCAGCCTTTGTCCAGGACCAGGACACTCTCCAGGAGGGTCTGAGTACTCCAGGAATAGCACTTCCTCATGCACCCACTGGCAGCCACATATCAGCTGAAATTCGCTCAAATTCTCTTACTGACCCAGTGGTGTTTGGCTTGCTCCAGGATCCTCAACATGATTCTCCTGCCCCTGAAGCTTCTGCCCTTTCCCAGGAAGAGAACCCCAGAAACCAATTAATGGCTCTCATGCTCTTGACAGCCCAGCCCCAGGAATTGGTGATGTTTGAGGAGGTATCAGTATGCTTCACTTCAGAAGAATGGGCATGTTTGAGCCCAGTTCAGAGGGCCTTGTACTGGGATGTTATGCTGGAGAATTATGGAAATGTGACTTCCTTAGAATGGGAGACCATGACTGAGAACGAGGAGGTGACATCCAAGTTGAACATATCTCAAAGAGCAGATTCTCAGAGAGGAATATCAAAAAGATTTCAAGGAGGTGTTCCATATCTTCTTGACTTTGAGGAAGAGTGTGAATGGCAAATTTTTTCAAGTCAGTGGAGAAATGAAGCAAGGGAAAGAGATACACTGAAGAAAGGTTCCCTATGTGAACGAGACAAGAAAAAAAGGACTCCACCAGAAAAACGAGGCCAAAAGTGGAAGGAATTTGAAGAAAGCTTGGCTTCAGATTCAGCTTTTTCTGAAAGTTTAATAGGTGCTGAAGGAAAGAAGCTGTATAAATGTGATATGTGTTATAAACATTTCAATAAAATCTCCCATCTTATAAATCATCGGAGGATCCACACTGGGGAGAAACCTCATAAATGTAAGGAGTGTGGAAAAGGCTTTATTCAGCGCTCAAGCCTTCTAATGCATTTACGAAACCATTCTGGCGAGAAACCTTATAAATGTAATGAATGTGGGAAAGCCTTCTCTCAGAGTGCTTACCTTCTAAACCATCAGAGAATCCACACTGGGGAGAAACCTTATAAATGTAAGGAGTGTGGAAAGGGCTTCTATAGGCACTCAGGCCTTATAATACATCTAAGACGCCATTCTGGGGAGAGACCTTATAAATGTAATGAGTGTGGCAAAGTTTTTTCTCAGAATGCTTACCTCATTGACCACCAGAGGCTCCACAAAGGAGAAGAACCTTATAAATGTAACAAGTGTCAGAAAGCTTTCATTCTGAAGAAGAGCCTCATTCTGCACCAGAGAATCCACTCTGGGGAAAAACCCTATAAATGTGATGAATGTGGAAAAACTTTTGCCCAGACCACTTACCTGGTTGACCATCAGCGGCTCCACAGTACAGAGAACCCATATAAATGTAAAGAATGTGGAAAAGTTTTCATTCGAAGCAAAAGCCTCCTCCTACACCAGAGAGTTCACACAGAAAAGAAGACTTTTGGTTGTAAAAAATGTGGGAAGATTTTCACTTCTAAGTCAAGTCTCATTGACCATAAGAGGATGCATAGCAGAGAGAAGCCTTATAAATGTACTGAATGTGGGAAAGCCTTCACTCAGAGCGCTTACCTTTTTGACCATCAGAGACTCCACAATGGGGAGAAGCCCTATGAATGTAATGAATGTGGGAAAGTTTTCATTCTGAAAAAGAGCCTCATTTTACATCAGAGGTTCCACACTGGAGAGAATCTCTATGAATGTAAAGACTGTGGCAAAGTCTTTGGTTCTAACAGAAACCTCATTGACCACGAGAGACTCCACAATGGGGAGAAGCCCTATGAATGTCGAGAGTGCGGGAAAACCTTCATTATGAGCAAAAGTTTCATGGTCCATCAGAAGCTCCATACACAAGAGAAGGCCTACAAATGTGAGGATTGTGGGAAGGCTTTCAGTTACAATTCAAGCCTGCTCGTACATCGGAGAATCCACACCGGGGAAAAGCCTTTTGAATGCAATGAATGTGGAAGAGCTTTCAGTTCTAACAGAAACCTCATTGAACATAAGAGAATCCACAGTGGTGAGAAACCATATGAGTGTAATGAGTGTGGCAAATGCTTCATTCTGAAGAAAAGCCTCATTGGACATCAGAGGATTCACACAAGGGAAAAATCGTACAAATGTAATGACTGTGGGAAAGTCTTCAGTTACCGCTCAAACCTGATAGCCCATCAGAGAATCCACACTGGTGAGAAGCCTTATGCATGTAATGAGTGTGGGAAGGGCTTTACTTACAATAGAAATCTTATTGAGCATCAAAGAATTCACAGTGGAGAAAAAACCTATGAATGTCATGTATGTAGAAAAGTGCTTACCTCTAGTAGAAATCTTATGGTGCATCAAAGAATCCATACTGGAGAAAAACCTTATAAATGTAGTGAGTGTGGAAAAGACTTTAGTCAGAACAAAAACCTTGTTGTACATCAGAGAATGCACACTGGGGAAAAACCATATGAATGTGAAAAGTGTAGAAAATCTTTTACTTCTAAGAGGAATTTAGTTGGCCACCAGAGAATCCACACAGGAGAGAAACCATATGGGTGTAATGACTGTAATAAAGTTTTTAGGCAAAGAAAAAACCTGACTGTACATCAGAAAATTCATACAGATGAAAAAAACTGTGAATGTGATGAGTCTGAAAAAGAATTCTCTCAGACTTCAAACCTTCATCTTCAACCAAAAATCCATTCTTTGGAGGATTTTCGGTCCTATTCTCTTGGGTCCAAATTCTCTTGGGTCCAAAATGCCAATGAGTCCAAGATCAAGATTCAGAAAATCTAGTATTGTGTAAAATGGAATACCATCCCTGCCTCTGTAAGTGACTGTTGGATAAATGGCAGCATAGGGTTTTTATAAGGAAAAAAAAGTCATGATTGACCCTTTTGTAGACAAGTGTGTTGCATGAGGCAGAAAGTTAATCTAGACTTTCAAGACTATGAAAACATAAGCCAAATTCTAGTTAAAAGATACTCTGTTCCAAATCATTTCTTATGAACCTATAAAAGGACCTTGAAGCACTTAAAGATTCTGAAGAAACTGAATTATGATTTATAAGATATAATGAAGATGTTGTAAATGATGGCAAAAATATCTTTGTATTAAAAAGTGTATGTTTTGAAAAGATACGTATATTTGGTACATCTTAAAGATAGTATCACTGTTAGAGAATGTCTATACAGACAGTGTGATTAAGACATACAAAACATGAAGTTGGGTGGGTAGGACTGCTCTTTGAGGACAATTTAAGTACACTGGATTTGGAATCTGAAAACCTAGGTTTGGATCCTGGCTCTTTCACTTACGAGCTCTGTGATGTTATTAAGTCAGTCTCTAAGTCTCAGTTTCTCTGTCAGTCAAATACTGGCATAACCCCTACTTCATAGAATTGTTTTGAGCATTTAGTAAAAGGATCATGTGACAGTACTTTATGAAATAATTTAATTGTCAATAAAATTGGATAAAAGAGATATGGTCAAAATCTGGAAAATGGCATAATGTAGTGTTTGTTCATCAAGTTAATATTAGGACTTCATGAACCTCAAAAGTTTAATTTTTATAGTAAGGAAGTATGGTGGATGGTTAACTTTGGAATTTAGTACTCTAAAAAAACTTTAAAAACAGCTTTTTAAATGTTTAAGGGAGATAATATATAATATACCTAGTTTGTTTTTATGGAAAAAAAATATTGGCTTACTAAATAATGTCTGGCCATTAATTTGATGCCAAGAAAAAAAAGTTTATTTTTTCAACCTTTGGATTTTAAACCTAGTGGATGTAGAGTGTCAAAATAGAAAGACAGTCCTATGTCACTTGCCTTGCTGACCGGGAAAAATCCTTAACCTCAACCTCAGAGCTGATTATCTCTGCTACTGTCATTCTCACTTCTAATCAATATTTCATTGGTAAACATACAAATGGCTTGTTACTCAAGAGACAACATTCTATCCCAGCACTCAACTTACCACATAAGTTTTTTTACACAGCCAAGCCCTTCAAATCTCTGATTATACCAATTCAGAATCCATCTCTGAGTGGTCAGGCCCATTTACTCCCACTGAACCAATCATTATTCATTCTGTACCCTTTTGTACATTTGTAAACTTAATTCTTGTATTCTTGGTTTGGTAATTTTATGTTGTAATTCTCAGAACGCCAGTTCTGTCACTGAAGTATAAATACCTTAATATTGGGATTTTGTTTTCTGATACTTAGCAGCATTGCAGTGGTGTGTTGATTATAGTAAGTGTTATGAATTCAACCCTGAAGTTCTTTGAGGGCTGGTTCCTTTTTAGACTGAAAGGACCAAGAGTGAAAACTGGAAGGGGCCTGAGTTAAAAGTCTGAAGGCCTTAAGAGTCAGATTCTGCCACTTTTCCTTGGACAAATGGTTTCATTTCTTGGAGCCTTGGTTTCTTCATTTGTTAAACAGAAGGAAGAATATCTACCTCCCTAAGTTTTTATGGGGTAATGAATATGAAGATGCTTTTTGTCCATACTGAAGAAAAATTACCCCCATTATGTAATAATCACAACTACTTTAACAATGAAGAGATCTGGCATTTACCTCTTAATCAGTTTAACAAAATGTAACATTGCTGAGACAACTCACATAATGTGCCTCCCTCCACATGTAATGCGATAAGCCAAAAGTATAACCTGAATTCATCAAGCTTCTTAGACCTGATTGCTAGTTTACAGGAAATACAGGAAGCAAAGGAACAAGATAAAAGACATCATAAGAAACAAGTTCAGAATGCGGCATATTGTCTAGGAAAACTGCATTGTTGGAATCCCCTGGCCGCCCAGTGGTGAGTCCTCTGCTCTCATTGCGGAGGGCGAACATTCAATCCTTAGTTCAGTTGGGGAACTAAGATCCTACAAGCTGGGCGGTGCAGCAAAAAAAAAAAAAAAAAAAAAAACCACCACTGCACTGGATTCTTCAAAGATGATGAAAAAGAGAAGGGAGTGATAATAATTGTTGATGCTGGGTGAGTATTGAGAGTTTATTGTACTACTTTTGTATATGTATGAAATTTTCCATAATGAAAGATACAACTAGTGGAGGGGAGGGGGGTTTAAAAGATACTAAAGAGCGAGGATGAAAAGGCATTACACACTGGGAGAAAATGTCTGCAAATCATATATCCAACACAGAATTTGTATCTAGGCTAGATAATTCTTAAAACTCAGCAATAATAAATAGATCCAATTAGAATATGGGCAAAGGACATGAACAGGTATTTTACCAAAGTATAAATTGGCAAGTGAAAAGATACTCAACATCATTAGCCACTAGGGAATTGCAAGATACAAATCTGTACAGCTATCAGAAGAGCTTTTAAATATTTTAATGCTAAATGCTGGCAAGGATGCAAAGGAACTGAATCTATTACATTGCCAGGAATGAGAAATAGTACAGCCACCATGGGGAATAATTTGGCAGTTTTTTATAAAACCAAACATGCATTTACCATATGACCCAGTATTTGCACTCTGAGCATTCATCTCAAAAAAATGAAAACTGTTACACACACACACACACACACACACACACACGCCTGTATGTGATTGTTAAAAGCAGTTTTGCTAGTAATAGTAATTTGTAATAACTCATCAAATATCCTTCAACAGGTGGTTAAAAGAAACTGCCATATATCTATACCATGGAATACTTACTACTGTGCAGTAAAATTGAATGACCTATTGATATCTGCAGTGACTCAAGTGCATTCCAAGAGAATTATGCTGAGTGAAAAAATCCAATCTCAAAAGGTCGTATACTGTATGGTCACATTTATATAATACTCTAAAATAACAAAAAAAGTATAGGGATGAAAAAAACCAGATTAGTGGTTGCCAGAGGTTGGGGATGGAGGGACAGAGCAACAGAAGAGAGAGGGGTTGCCCTTAGAGAGGTCTTGGTGTTGGAAACATTGTGTATCTGAATTGTGATGGTGGTTCCACAAGTCTACACGTGATAAAATGACAAGTACACACACACATTGTACCAATGTCAGTTTCCTGATTTTTATCTTAAATTATAATTATGTAAGATGTACCCATTGATGGAAACTAGTTGAAGGTTATTATTATCTTTGCAACTCCTGTGAATCTGTAAATTCATACTAGAAAGCAAATCTAAACAGCCATACCAAATATAGTGTGTGAAGCTGACTTGGAAAAACAATTAATGAAGTCTATATTTTAGGACAGTTGAAAATTTAAAAATGACTGATAATAGATGATATTTGGGAATATTTGTTAATTTTCCTACCTGTAATGATAGTATTGTTAGTGTCAAGATTCTTATTAAAGGATACATGTAGAACTATTTGGAATGAGTATTTTGATGTTTACAACTTTAAAAATGTTTTTCAGTATGCATAGAGAGAGAAGGCAAACGTTGTTTAGTTACTCAGTAATGTCTGACTCTTGTGACTTCATGGGCTATAGAAGCCTACCTGGATCCTTTGTCCGTGGAATTCTCCAGGCAAGAATACTAGAGCGGATTGCTATTTCCTTCTCCAGGGGATATTTTGGACTCAGGATCTGATCCTGTCCCCTGCAGTGGCAGGCAGATTCTTTACTACTAAGCCACCAGGAAAGTCCAACGCAAAGAGAGTGAAGTGTTTTTGTTGAGTACAGGCATTCACTGTACCATTCTCTGTACGTTTGATATTTCCAAAATAAAACATTAGGGTCAAAATGATCAGGGCCTTCTACAGATGGATACTCTGTAGCTTCAGGCTC EMBV3_19923 CTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAATGTGATGAAGAAACTTGCAAAAG Gene GeneID:510909|STX6:NM_001082431:20_cdna UTR3_Alt 2 NULL GeneID:510909 16 GENE STX6 MGC151807 syntaxin 6 EMBV3_17190 GAGACTCTACTGCCACCCTTTTGGGAGAGATACGGTGAGAAAACGGATTACCATCGCCTC Gene GeneID:617192|TMEM217:NM_001079628:68_cdna Constitutive 0 NULL GeneID:617192 23 GENE TMEM217 C6orf128 transmembrane protein 217 EMBV3_13550 AGATCATGCTCTGGAGGGGGCCGTCCTATGCACTCTAGGGTCTTTAGCAGTATCCCTGGC Gene GeneID:518062|SLC17A9:NM_001100378:1111_cdna Constitutive 0 NULL GeneID:518062 13 GENE SLC17A9 C13H20ORF59 solute carrier family 17, member 9 EMBV3_34154 TTGCAACTAAAGCCTTATTTTAAAGTACTATATGATTTTACAATGTTATTTCATCCTTTT Gene GeneID:518612|PCDHB13:XM_002689254:157_cdna Constitutive 2 NULL GeneID:518612 7 GENE PCDHB13 NULL protocadherin beta 13 EMBV3_23690 CACGCGTCCATCCAGATGAACGTGGCCGAGGGCGAGTCAGATGACTCCATTCTCCGGCTG Variant GeneID:615178|RPS21:NM_001040581:1291_cdna 162^233 1 EMBV3_33713 GeneID:615178 13 GENE RPS21 MGC133562 ribosomal protein S21 EMBV3_06598 CGGACATTTGGGTTAGTCTCACTTTTTGGCTACTGTGAGTAATGCTGATAGGGGCATTTG Gene BVV0102_096405 - 0 NULL GK000004.2:104417081-104577324 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27728 GAATATGAGGGTGGCTAATCCCTTATGTGTCTGAGGCCTAAATCAAGAGACTCATTTTTT Gene GeneID:507477|ALDH7A1:NM_001045969:31_cdna Constitutive 2 NULL GeneID:507477 7 GENE ALDH7A1 MGC128050 aldehyde dehydrogenase 7 family, member A1 EMBV3_23254 ACATCCCTAACATCCTTCAGCATCGCAGACATCCTAGGCTCGTGCATGATTCCCCGAAGG Gene GeneID:538906|LBX2:XM_002691192:113_cdna Constitutive 0 NULL GeneID:538906 11 GENE LBX2 NULL ladybird homeobox 2 EMBV3_40760 GTGGGCGAAGACTTCCGGTGGTACTTGAAGGACTGGACTGACTATGACGAAAAGGCTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20702 AGCTGTGAAGATTTACCCATTCCAGGCACCTATCATCGTGGACGAAACTCAGGGCCCAGT Gene GeneID:509779|CACNA1F:XM_002700103:236_cdna Constitutive 0 NULL GeneID:509779 X GENE CACNA1F NULL calcium channel, voltage-dependent, L type, alpha 1F subunit EMBV3_27028 AGACCCTGATCCTGGGAAAGATTGAGGGAAGAAGGAGAAGAGGATGACAGAGGTTGGATG Gene GeneID:790332|LOC790332:XM_002683794:2_cdna Constitutive 0 NULL GeneID:790332 23 GENE LOC790332 NULL similar to enterocytin EMBV3_03861 CCACTCTATTCCTTCAGCATCGTGGTACTGGATAAACATGGTGTGGACAAGGAGCGCTAC Gene GeneID:337918|SRPX:NM_001040489:13_cdna Constitutive 0 NULL GeneID:337918 X GENE SRPX MGC134187 ext1 sushi-repeat-containing protein, X-linked EMBV3_32779 CAACGTGGGTGACCTCAAACTCCGCCGGATGCCTGGCCCCAGGAGTGAGCAGCTTCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12377 CTATATTAGAGTGCGATTCTACGAGGGCCCAGAGCTGGTGGCAGACAGCAACGTGATCCT Gene GeneID:281088|COMP:NM_001166517:15_cdna Constitutive 0 NULL GeneID:281088 7 GENE COMP NULL cartilage oligomeric matrix protein EMBV3_00275 CGGGAAGAACCTGAACGCTTTATTTTGATCTCAGGGGTTTCATGCCATCTTGTGGTCCCC Gene GeneID:526376|STK10:XM_002696251:13_cdna Constitutive 0 NULL GeneID:526376 20 GENE STK10 NULL serine/threonine kinase 10 EMBV3_39725 CACACAGTCTTGGGATGCGGGGATCCAGGACCGGCTTCAGGTTTACGCGCGCTCCTTCTT Gene GeneID:444866|ZNF470:XM_002695475:192_cdna Constitutive 0 NULL GeneID:444866 18 GENE ZNF470 NULL zinc finger protein 470 EMBV3_33993 AAGGGGCTGACGCAGAAGGACTTGGCCACGGCCTGAAGCTCCGGGGGAAGGACATTGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20676 ATTGGAGGACCACCTTTTTGGCAATCTATGGTGGTGTTGGAAAAAATGGATCAACGATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07922 CACCCATCTGGCACCCCTTTTCTGGTGACTTCCATTTTGGTAAGGAAAGTTTGGTGTGTG Gene GeneID:505537|RRM1:NM_001113296:1_cdna Constitutive 0 NULL GeneID:505537 15 GENE RRM1 NULL ribonucleotide reductase M1 EMBV3_00690 CTTCTGGCAGCGGTACCCGAATCCCTATAGGTGGTGGAGGAACGATGTGTTTACCGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32182 CTGTCAGATCCCCCAGATTAGGCCAGGTGGCTAGGATTGTCAGTTATATGGGTACTACAA Gene GeneID:533764|RPE:NM_001098079:38_cdna Constitutive 1 NULL GeneID:533764 2 GENE RPE NULL ribulose-5-phosphate-3-epimerase EMBV3_42787 ACCTAAAGGAAGGAGCGAGTCTGCATTGCTCAGCCTCCCAAGAGGACAATCCCTATGTCT Gene BVT0101_076082 + 0 NULL GK000026.2:31678529-31718067 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150766 TCONS_00150768 TCONS_00150769 1 XLOC_091945 NonCoding TCONS_00150766 XLOC_091945 NonCoding NonCoding - 26:31682959-31700917 - TSS112845 1580 3 TCONS_00150766_3 83 0.166455696202532 3 0.912179094503536 2.20987965407119e-16 8.73202421044552e-05 1.29475613788414e-11 0 0 2.68077946710432e-12 6.40607674812453e-05 0.000333979982843584 5.8928189460022e-14 3.18360797870838e-12 8.88083602950163e-13 0 5.73869631993507e-15 0.000105108994083008 0 0 0 0 1.14416218854974e-07 0.000192921069494922 1.49190596235312e-14 0 0 0 5.30161287766244e-15 4.97514305889027e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.0396697172842239 0.789004024212369 -0.0214281690281307 0.708389573526454 CCCACCCCACCCCCGGTGGAGATTCTGCCTCACTGGGTCACGGGAAGGCACTTGCATCTTAGTGGAGCCTCATGAGTGATTCAGTGCAGGTGGAGTTTGTTCCTCGCGCTTGGAAAAACGCTGCCCTAGCTGTCAACCGGGGACTTCCCCAGCAACTCCTGGAAGAGAAGGGACATTTATTTTGCTGGGGGGAAGGGCAGAACAGATGTGAATGGAGACCATTGAAGGAATTGAGTTAATATACAACACAGGCCATGTGCGACCAGATTAAGCCAACGGAAACTTTTGAAGTGAGGATTGAGGAAACCTGCAGGCGGCAAGTAGAAAAAGTTTTCTGATGGCTGCTCAAGTGGATTATCTGCTCTGTCAGGCTGATTTAAAACTGTTCCATGTGGCGGGGGAGAAGGGAGTTTACATTGATTCATCCAGTTTTCAGTCAACAAGTTCTCCTGGGGCCTTCTATGTACCAGGTCCTGAATGTACAGAATTGGTGTTCAAAGCCATCTTGATTCCTGCTCTCAAGGAACTGACAATCCAGAGTCGAGTCACTGGAAATTCACCAGCCCCAGTGTGCCTGTCTATAGGATGATAAGTCAAAGTGACAACAACTCTGGAGTGTTAAATGTGTCAGCTTGTCAGTGGGTCACCTTGGCCAGGGCATGCCTGCCCAGAAGAACTCTGAGAAGCTCCGGAAGGGTGTGTGAGGAAGGCAGGGTCGGCTGAGCACCCTGAGACCAGCAGGGGAGAAGCCAAGTCAGGAAAGGCAACCAGGATAACGCTGCTGTGTCCTATTGGTTCAGGCAAGAGGCCAGAGAGTTTAGCCAAAAGCAGCACCAGCAGATGAAAAACAAGGAGGTGACCCACGTCCGGAGCAAAGTTGCCTGTGCTGAGAGCTCTTTCCTCCACAGAGCGTGGCTAAGCCGGGTGCCTCAGTCGACTCATGGTTCCTGAAGAAAGAGAAGACATAGGGATTGTCCTCTTGGGAGGCTGAGCAATGCAGACTCGCTCCTTCCTTTAGGTCCAGAATTTCTTTCTTCTTATGGCTGCGGAGGCCTCTTTGGATCCACGAGTCCACACACTTGCACAAGATTCTACCAAATCACCTTCCTCCCAAAGTTGTGCAGATTTGCACTGTACTCACAGTGGATGAGAGTATTCACTCTTACAGATCCTTGCTATGTGTAAGGGTTCTATTCATTTTTTTTTTTTATGTGCATTTTTGGACAGCAGTGAAGTTGAACATCTTTTTATGTTTATTGGCCATCTACCTTTCTTCAGTAAATTCTTTGCTTATATTTTTTGCCCATTTTTCTGTTTGGATGTCTTATTTGGAAGAACTCTTTGTCCATTAAGCATGGACATCCATTGATAGGAAGAAAAACACTTTATTTTGAAGCACATACGGGCAGGGTTAGGGCCCTTGGAACAGGTACTAAGGAGCCAAAAGTCTTTGTTTGACATTAGGGATGTTAATCTTCTGTCTGTTAACAGCTGCAAATATTTTATTCAAATCTGCTATTTGTTTTTAAACTTTATGCTGACTTTCCTCTTGTAGGAGTTTTAAATGTTTCAGTATTCAC TCONS_00150758 TCONS_00150759 TCONS_00150760 TCONS_00150761 TCONS_00150762 s 3' 4432 TCONS_00150758 TCONS_00150759 TCONS_00150760 TCONS_00150761 TCONS_00150762 s 3' 4432 EMBV3_15632 ACTACCCTAGCGGGCAACCTCACAGCACGGCAGAACTAGCATTAACAAATCACAAGTTGG Gene GeneID:504820|BLZF1:NM_001045899:90_cdna Constitutive 0 NULL GeneID:504820 16 GENE BLZF1 MGC128566 basic leucine zipper nuclear factor 1 EMBV3_07251 TGCAATCCTGCCCATCCACCACCTGCCAACCCTCCATACCCACCACCTGGCCCTGGCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17681 ACCTGTCCTGACAAGGGGCTTGTGCTCTGCGGGGATGAGCAGGGCAGCGTGTGGATCTAT Gene GeneID:100138861|LRWD1:XM_002698195:734_cdna Constitutive 0 NULL GeneID:100138861 25 GENE LRWD1 NULL leucine-rich repeats and WD repeat domain containing 1 EMBV3_34446 CTAAACTTTTTCTGCCATCCTTCATCCACCTAAATCTTCACTAAGGAATTCTAAGGACAG Gene BVV0101_020063 + 0 NULL GK000021.2:36440298-37271192 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36226 GGGAAGCAATACTCATCCCGTTCCAGAAGAACAAAATCACAGCAGGACGCTGAAACCTGG Gene GeneID:100297592|LOC100297592:XM_002691819:495_cdna Constitutive 0 NULL GeneID:100297592 12 GENE LOC100297592 NULL hypothetical protein LOC100297592 EMBV3_04030 GATTCTGTGTAAGTCTTTGAATTACAATAAATACTGCACACCCACTAATTTGGGTTCTGC Gene BVT0101_023059 + 1 EMBV3_00771 GK000002.2:44166682-44185983 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102356 TCONS_00102360 TCONS_00102359 TCONS_00102361 1 XLOC_061847 Coding TCONS_00102360 XLOC_061847 Coding Coding LOC100847279 2:44146282-44169219 j TSS76233 3787 1 TCONS_00102360_3 370 0.0213889622392395 10 0.835324380885944 7.99645489701509e-06 9.08420525602641e-05 0.000107025703425995 9.81735188076631e-05 0.00014024356382423 0.000105315359042553 0.000183973636157417 5.77581109437483e-05 0.000422312621601212 1.61864087415868e-11 6.20212208921053e-05 2.73837981232295e-08 7.42363405432659e-06 4.51023672755081e-05 1.46258726051268e-17 8.37316256882276e-06 0.00239733939954891 8.45120014514337e-12 4.73363719327735e-05 0.000246394450238172 2.28825284711725e-05 2.91045997203204e-06 4.50046706260791e-07 0.00031560609063038 0.000164356994445169 0.000289758693009408 2.17240565555987e-06 1.35516385489752e-06 1.04848336477027e-06 7.36359489719546e-05 XM_003585736.2 LOC100847279 PREDICTED: Bos taurus signal transducing adapter molecule 2-like (LOC100847279), mRNA. 0.0 6754 99.21 0.997359387377872 NM_005843.4 STAM2 Homo sapiens signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 (STAM2), mRNA. 0.0 1763 86.41 0.374438869817798 TCONS_00102360_3 sp|O75886|STAM2_HUMAN STAM2_HUMAN Signal transducing adapter molecule 2; 0.0 694 90.19 0.989189189189189 3 coding 0 0 0 0 0.0099523938520788 0.975876212928159 -0.00193812553570513 0.971744635718482 ATGCCCTTTACTGTCTCAGCTGCTGCCAAAAACGGTACATCATCGAACAAAAACAAAGAAGATGAAGATATAGCTAAAGCTATTGAATTATCATTGCAAGAGCAGAAGCAGCAGCACACAGAAACAAAATCCTTATATCCATCTGCAGAAATTCAGTCAAATAATAAAGTTGCAAGGAAAGTGAGAGCTTTATATGATTTTGAAGCCGTTGAGGACAATGAACTCACTTTTAAACACGGTGAAATTATTATTGTTTTGGATGACAGTGATGCTAATTGGTGGAAAGGAGAAAATCACAGAGGAATTGGACTCTTCCCATCTAATTTTGTAACATCTGTGGACAAATTGAATATAATTGATGATGAGGAGGAGGAAATTAAGAAATCAGAGCCTGAGCCTGTTTATATAGATGAGGATAAGATGGATAGAGCCCTGCAGGTACTGCAGAGTATAGATCCAACAGATTCAAAACCAGATTCTCAAGACCTCTTGGACTTAGAAGATATCTGCCAACAGATGGGTCCAATGATAGATGAAAAACTTGAAGAGATTGATAGGAAGCATTCAGAATTGTCTGAATTGAATGTAAAAGTCTTAGAAGCTCTGGAACTTTATAATAAGTTGATGAATGAAGCGCCAGTATATGCAGTCTATTCAAAGATCCACCATCCAGCACATTACCCAACTTCATCAGCTGGAGTTCCAATTCAGACATACCCAGTTCAACCACATGGTGGAAACTATATGGGTCAAAGTATTCACCAAGTCACTGTTGCCCAAAGCTACAGCCTAGGACCAGATCAGATTGGTCCACTGAGATCTCTGCCTCCAACTGTGAATTCCTCAGTGACAACACAGCCTGCTCAAACTCCGTACTTAAGCACTGGACAAGACACTATTTCCAATCCTACTTACATGAACCAGAACTCTAACCTTCAATCAGCTCCTGGTGCAGCTGCTTACACACAGCAGATGGGGATGTCTGTGGATATGTCATCTTACCAGAACGCTACTTCCAACTTGCCGCAGTTGGCAGGCTTTCCAGTGGCAGTTCCAGCTCATTCAGTTGCACAGCAGCAAACAAATTACCATCAACAGCAGCCTCTCCTTTAAAATCAAACCAAGCATTTTCTTGAAAGCCTTCATAAGTGTACTACTCAACCCTTGTGATTATAATCTGAAAATACTAAAAGAAGGAAAAAAAAATTTTCTCAACTGAAAAGACCCATGAATAAATAAAGCACAAAAACCTGTCTTTCTTTTTATGCTATAAAAAGTTCTTTTCAAGTTCCAGCTTGTTTGAAGTCAGACTTTTGATCAGAGGCCGCTTCAAGTTGCTTCCCGTTAGTTTTTTCTTACTTTCAAATCTCTCTACACAAATCTGGACAAACAAACAAATAGCCTTATGACACTAAACAACAAGAGATAGGAGTGTAGGAGTGTATAAGGAAAGCAGCATTTACCCCTAAATTGTCATGGTAATTGGGAAAGCACTGAAACCTTTAAGTACTTTCTGTCTGCTCTTTTTTTTCAGTTTCCCACATACCATTGTTTAAAAAGGCGAACATGTTTTTGTGCAAGCATTTAGCTTCCCTGCGTATTTCCTCTGTTTCCTTAAATTGCAGTTGTGTTTGCAGTACTGTCAGTTTTGCTCTCAGTGATGTGCTGAGTAATAATTAGCATAGAATTGTCTACGGAAGGAAGAGCACTTTGGGAGGAACAGAAATGTTTTCTGTTATTATTAGTGAAGACCATGTAAATGCAGGTGTGTGTTAAAGTGTTTAGCCAGTTCTCCAGTCATGCCAACAGTGGGTTGAGGGATGCCCCATGAAACATTTCCATTCCCTGGGGAAAAAATAGAAAACATTTTTTCCTACAAGGGTCCTTAGCATTTAGAATTGTCACTTAACAACCTTTTCAAGTGGTTTTGGCCAGCATCTAATGAAGATATAAGGTCCATTTGGTTTTGTTTTTTTTTTTTGGTTGGTCGGTTGGTTTTGTTTTTCTGCAGCATGGTGTGCAGAGACACTGCATTTCCTTTTTACTGACTGTGTGAATTTGAGCTACGAGACATTCCTAATAACTTGATGCAGTGTATACCAGGCGTGAATAATGTGTGTTTTTACTGATGTGTTGTTTTTTTAAAAGGTGATTTGAGTACCAATGGTATGCCAGACTGTTGACAATTTTGGCCATTGCTTTCAGAAGTAATCTTGAGCTTGTGGAATAATAACAGGCAGTGGATTTATAGGGAAGCCATCAAGACAGTTTTCCTGAAGCCTATGTTCTAGGTGAGTGTGAGGTGCTAATATATTCCACGTACTTTGGGAGTTAGGTAGTAAACCAATAGGGATTGTTTTCTTTCCTAAGAATTTGCACCACTACTGCATCACCTACCAACCTTTTAGATAGCACAAAATGTGAATACATATGCTTACAGATTCATGGTATTTCAACTGGGAGAAACAATGGATGTAAAGTTAAGTTTTTAAAAATTTAACTAGCAGGAATTCCCTGGCTCTCCAGTGGTTATGACTTGGCCCTGTTACCACTGGGGTCCATATTCAAACTAAGATGCAGCAAGCTGCAAAAATAAATAAACTTGCATGGAAGCAAGATTTCTATATTGTTTTTTAAAGAAAGCCCTTAATCTTTCTACTAAGAATCCATTTGAAGATAGTGCTCTGGAAATATTTGTCATTTCTGTATTTATAGAAATTCCATTATAAATATGTTCCTTTTTCAAAGAAACTATATTCTGGGAAAAAACAGTCTTCTATATACTACTTGGTCTACATTTAAAGGGAAAAACAAGCAGAATTTGAAGAACCCAATTTCTGTCATTGTTTTATTTCAGATATAAGTAACTGGAAAGAAACTTTTAACCTTTGATGTCTGTTTTCTGTTTTTTATCCAGTATTTTCCTTCCATGTGAATTCAGTTATATACTTGTAAGAAATTCTAAAATAGCACCTTACTTTTTTGGAAATGAATCTTCTATAAAGAAAACAAAACAGAAAAAACATTTTCAAAACCTCTTGATAATAATTAACATTTGCATAATATATGAAAAATCTTACATTTTCCTCCCAAACAATATTTAATAGTTATTTTAATGTTTGTGTAAATAATTTATGTATAATTGTGATCTGAGTTGTAAAAGCTTGATTCTGTGTAAGTCTTTGAATTACAATAAATACTGCACACCCACTAATTTGGGTTCTGCCATTTTTAAGTTCAACTAATGTAGTTTTGAAATGATATAACATGAAACATGTATATAGTGTATATTGGCATTTATCTGTGAAATTTTATATATCTGGAAGTTTCTTCTCCCTTTTAAATTAAAAATAATTTTATTTTTGCCATACTGTAGCGAATTTTGTGTTACAGGTTGTTGATAGTATAAAAATGTTATTAAATCTGTGTACTGAGATGATATTTTTGGTGTTAATAAGAAAAACAGGGTTATTTTTCTTTCTTTTTCATGATCTTATGGATGTGTTTAAGACCTGTTTATAATTAAATGTTTTCTGCCAAAAGAATTGTCTAACATCAGATTTCTACATTAGTTTCATACTATTTTATATAAAAAATAAAAATAACTTCTACTTTTTCATATGGAAATCTTGGTACATTAGAAAGAATTCCTGACAATTTATAATACAATTTTCACGAATGTAGGAAAAATCTACCCTAGATCTTAAACTATATTAAGTGAGATATGTTCTTACACTTTGAAAAATACATGCTGTACCAACATTGTCTTGTAATTAGGTAACTTGTT EMBV3_34536 GCTCTGTGGTTCGGCCTGTGATTTTCCTCTGCCCACTCTCTTTTTAAGGCTGTGGACTCT Gene GeneID:510462|OXNAD1:NM_001035090:2_cdna Constitutive 2 NULL GeneID:510462 1 GENE OXNAD1 MGC15763 oxidoreductase NAD-binding domain containing 1 EMBV3_17169 ATGTATGACGAGATCATTGAGCTGAAGAAGCAAACTGCAGACCGATGTGAAGACCACGAA Variant GeneID:618833|IQCE:XM_002698166:644_cdna 700^935 4 EMBV3_22238 GeneID:618833 25 GENE IQCE NULL IQ motif containing E EMBV3_37563 TGTCACCCTCTCCACTATCCAACAGTCATGTCCCGGAGGGTCTGCATTCACCTGTTAGTT Gene GeneID:538839|LOC538839:XM_002693712:410_cdna Constitutive 0 NULL GeneID:538839 15 GENE LOC538839 NULL similar to olfactory receptor Olfr987 EMBV3_35119 TGGACTGACCAAATGCTCAAGAGACTGACCCCCCGAAGGAAAATAAAGCAGGACTCGGAT Gene BVV0102_038559 + 0 NULL GK000019.2:25100375-25106723 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18032 CAACATGTTCCTGGAATCTTGGCCTCAACCTCCCGCTCTGCATCTGGAGGCAACCCAGCA Gene GeneID:505743|MRAP:XM_002684584:93_cdna Constitutive 0 NULL GeneID:505743 1 GENE MRAP NULL melanocortin 2 receptor accessory protein EMBV3_14243 CATGCTAGCCATGAAACTTCTCACTTCTAATGTAACAGAATCTTTTAGGAAGAAATCGCT Gene GeneID:534432|CCDC39:XM_002684889:117_cdna Constitutive 0 NULL GeneID:534432 1 GENE CCDC39 NULL coiled-coil domain containing 39 EMBV3_27310 GTGACAATTACCCCATTCATCTTCTTTGCTTCTGCCAGACTCTAGAATTAGGAAACGGTC Gene GeneID:100335556|LOC100335556:XM_002699950:2_cdna Constitutive 0 NULL GeneID:100335556 X GENE LOC100335556 NULL hypothetical protein LOC100335556 EMBV3_21644 GGGCACCACCTTGTTCATGGCAGGTTTCTTCGCTCCTGGGTCTGTGATGGTTGGAATTTA Gene GeneID:785719|TAAR2:XM_002690254:89_cdna Constitutive 0 NULL GeneID:785719 9 GENE TAAR2 NULL trace amine associated receptor 2 EMBV3_04008 CATGAACAAGAGGGGTCGGCTCTATGCTTCGGAGAGCTACAACGCCGAGTGCGAGTTCGT Gene GeneID:618481|FGF3:XM_002699439:138_cdna Constitutive 0 NULL GeneID:618481 29 GENE FGF3 NULL fibroblast growth factor 3 (murine mammary tumor virus integration site (v-int-2) oncogene homolog) EMBV3_37716 GGATTTCGAATCTTCTCAAAGAGATCACCTGCCCGTTCATACAGCTCGCCCTTGATCAGG Gene BVT0102_070771 - 0 NULL GK000011.2:72183230-72223038 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025374 TCONS_00025373 1 XLOC_014743 Coding TCONS_00025374 XLOC_014743 Coding Coding LOC100848219 11:72185393-72222960 = TSS18438 5389 1 TCONS_00025374_8 1749 48 0.857823563860938 0.000123695893190983 0 1.54443065537338e-05 9.8611382525521e-05 1.19045733810712e-05 0.000126115192854606 0.000110377837619704 1.75542366847107e-05 8.63744259381958e-05 0 4.22171516020086e-07 6.30322399014565e-05 1.59410143855061e-06 4.71307303547303e-05 1.10865739327287e-05 0.00144014982971183 1.22254176696797e-07 4.65320271003265e-05 8.78155295844542e-05 0.000244199892706226 0.000218004557523973 0.000209296386736474 0.000122566742102749 0.000227091158043113 0.000602971195815585 0.000141189010491352 0.000276153831444247 0.000110495713616706 9.00278949727591e-06 0 XM_003582802.2 IFT172 PREDICTED: Bos taurus intraflagellar transport 172 homolog (Chlamydomonas) (IFT172), transcript variant X1, mRNA. 0.0 9719 100.00 0.999814436815736 NM_015662.1 IFT172 Homo sapiens intraflagellar transport 172 homolog (Chlamydomonas) (IFT172), mRNA. 0.0 7557 91.30 0.992206346260902 TCONS_00025374_8 sp|Q6VH22|IF172_MOUSE IF172_MOUSE Intraflagellar transport protein 172 homolog; 0.0 3544 97.26 0.999428244711264 2 coding 1 1 1 1 0.145901826258462 0.220843189232164 0.112655960475865 0.0504579457210657 CGGCCGTGGCTGCGGCTGCGTGGCGGGTTGTCCAGGTAACCACGGGAGTTGTCGCTGTCTGTAGGCATCTGAGAGACAGGTGTTCGTCATGCAGTTGAAGCACCTGAGGACGCTGCTGAGCCCTCAGGATGGAGCTGCAAAGGTCACCTGCATGGCATGGTCCCAGAACAATGCCAAATTTGCTGTCTGCACAGTGGACCGTGTGGTCTTACTATATGATGAACATGGGGAGCGAAGAGATAAATTCTCCACCAAACCAGCCGACATGAAGTATGGCAGGAAGAGCTATATGGTGAAGGGCATGGCTTTTTCTCCTGATTCCACTAAGATTGCCATAGGACAGACTGACAACATCATCTATGTCTACAAGATTGGAGAAGACTGGGGTGACAAGAAAGTCATTTGTAACAAGTTCATCCAGACGAGTGCTGTTACTTGCCTGCAGTGGCCAGCAGAATACATCATTGTCTTTGGGCTGGCTGAAGGAAAGGTTCGTTTAGCAAACACCAAAACTAACAAATCATCTACCATCTATGGGACAGATTCTTATGTGGTGTCCTTGACAACAAATTGCTCTGGGAAAGGAATTCTCTCAGGTCATGCAGATGGCACCATTGTTAGGTATTTCTTTGATGATGAAGGCTCAGGAGAGTCACAGGGAAAGTTGGTGAACCATCCATGCCCACCCTATGCCTTGGCGTGGGCAACCAACAGCATTGTGGCTGCAGGCTGTGACCGGAGGATTGTGGCCTATGGAAAGGAAGGCCATGTGCTACAAACTTTTGACTACAGCCGTGACCCTCTGGAGCGGGAGTTCACCACAGCTGCAGCAAGTCCTGGGGGCCAGTCGGTTGTGCTGGGAAGCTATGACAGACTTCGGGTGCTCAACTGGAGTCCTCGGAGAAACATCTGGGAAGAGGCAAAGCCCAAGGAGATTGCCAACTTATACACCATCACTGCCTTGGCCTGGAAGCGGGATGGCTCACGACTCTGTGCGGGCACACTCTGTGGTGGAGTGGAACAGTTTGACTGCTGCCTCCGAAGGAGCATTTACAAGAATAAGTTTGAATTGACTTATGTGGGACCTAGCCAGGTGATTGTGAAGAACCTCTCATCGGGGACCCGAGTGGTACTCAAGTCACACTATGGCTACGAGGTGGAAGAAGTGAAAATCCTGGGAAAGGAACGCTACCTGGTGGCCCACACGTCAGACACACTGCTGCTGGGGGACCTGACCACAAATCGCCTTAGTGAGGTAGCTTGGCAGGGATCTGGTGGCAATGAGAAGTATTTCTTTGAAAATGAAAATGTGTGCATGATCTTCAATGCTGGAGAGCTCACCCTTGTGGAATATGGGAGTAATGATACCCTGGGTTCTGTACGTACTGAATTCATGAACCCCCATCTCATCAGTGTCCGTATTAATGAGAGGCGTCAGCGAGGAATGGAGGATAATAAGAAATTGGCTTATCTTGTTGATATCAAGACTATTGCTATAGTGGACCTGATTGGCGGCTACAACATTGGTACCATCAGCCATGAGAGCCGTGTGGATTGGCTGGAACTTAATGAGACTGGGCACAAGCTTCTCTTCAGGGACCGGAAACTTCGTTTGCATCTATACGATATTGAAAGCTGCTCTAAGACGATGATCCTCAACTTCTGCTCCTACGTGCAGTGGGTCCCAGGAAGTGATGTGCTGGTGGCTCAGAACCGAAACAACTTGTGTGTGTGGTACAACATTGAGGCACCCGAGAGGGTCACCACGTCGTCTATCAGGGGTGATGTTGTAGGTCTGGAGCGAGGTGGGGGAAAGACGGAGGTGATGGTGACCGAAGGTGTGACTACAGTTGCCTACACCCTGGATGAGGGCCTTATTGAGTTTGGAACAGCCATTGATGACGGCAACTACACCCGGGCCACAGCCTTCTTGGAAACTCTGGAAATGACCCCAGAAACAGAAGCAATGTGGAAAACCTTGAGTAAGCTGTCACTGGAAGCAAAGCAGCTACACATTGCTGAGAGGTGCTTTTCTGCTCTGGGACATGTTGCAAAAGCTCGGTTCCTCCATGAAACCAATGAGATTGCAGATCAAGTGTCTCGGGAATATGGTGGAGAAGGAACAGATTTTTATCAGGTCCGAGCACGACTAGCCATGCTGGAGAAGAACTACAAGCTGGCGGAAATGATCTTCTTAGAACAGAACGCCGTTGAGGAGGCCATGGACATGTACCAGGAGCTACACCGCTGGGATGAATGTATCGCTGTGGCTGAGGCCAAGGGGCACCCAGCCCTAGAGAAGCTGCGTCGGGGTTACTACCAGTGGCTGATGGACACACAGCAAGAGGAGCGGGCAGGCGAGCTTCAGGAGAGCCAAGGGGATGGGCTAGCAGCCATCAGCCTCTACCTCAAAGCTGGGCTCCCCGCCAAGGCTGCTCGGCTGGTGCTGAACCGAGAGGAACTGCTGGCCAACACGGAGCTGGTGGAGCACATCACTGCTGCCCTGATCAAGGGCGAGCTGTATGAACGGGCAGGTGATCTCTTTGAGAAGATTCGAAATCCACAGCGGGCTCTGGAGTGCTACTGTAAAGGCAGCGCATTCATGAAAGCGGTGGAGCTGGCTCGGTTGGCATTCCCAGTGGAAGTGGTGAGACTAGAGGAGGCGTGGGGGGACCACTTGGTGCAGCAGAAGCAGCTTGATGCGGCCATTAATCATTACATCGAAGCCAGGTGCTCCATTAAAGCAATTGAGGCTGCCCTGGGTGCCCGCCAGTGGAAGAAGGCAATTTATATATTAGATCTGCAGGACCGGAACACTGCGTCCAAATACTATCCTCGTGTGGCCCAACACTATGCATCGCTGCAGGAGTATGAGATTGCGGAAGAGCTCTACACTAAGGGAGACCGGACGAAAGACGCCATAGACATGTACACCCAGGCTGGCCGCTGGGAGCAAGCCCACAAGCTGGCCATGAAGTGCATGAGACCAGAAGATGTCTCGGTGCTGTACATCACTCAGGCTCAGGAGATGGAGAAGCAGGGCAAGTACCGAGAGGCTGAAAGGCTATATGTGACCGTGGAAGAGCCTGATCTTGCCATCACCATGTTCAAAAAGCACAAGTTGTATGATGATATGATCCGCTTAGTAGGGAAGCACCACCCAGACCTCCTCAGTGACACACACCTGCATCTGGGCAAGGAGCTGGAGGCCGAGGGCCGACTCCAGGAGGCTGAGTATCACTACCTTGAGGCCCAGGAGTGGAAGGCGACAGTGAACATGTACCGGTCCAATGGGCTTTGGGAAGAGGCTTACCGGGTGGCCAAGGCTCATGGAGGAGCTAATGCCCACAAACACGTGGCCTATCTGTGGGCGAAAAGCCTAGGAGGAGAGGCTGCCGTGAGACTGCTCAACAAGCTGGGACTCCTGGAAGCTGCTATTGACCATGCTGCTGACAACTGCTCCTTTGAATTTGCTTTTGAACTCTCCCGGCTGGCCCTCAAGCACAAAACCCCTGAGATCCATCTCCGATACGCTATGTACCTGGAGGATGAGGGAAAATTTGAAGAGGCTGAAGCTGAATTTATCAAGGCCGGTAAACCCAAGGAAGCAGTCCTCATGTTTGTCCATAACCAGGACTGGGAGGCAGCTCAGCGTGTGGCCGAGGCCCATGACCCTGATAGTGTCGCCGAGGTGCTCGTGGGGCAGGCTCGGGGGGCCTTGGAGGAGAAGGACTTCCAGAAAGCAGAAGGGCTGCTGCTTCGGGCCCAGAGACCAGGCCTGGCCCTCAATTACTATAAGGAGGCCGGACTATGGAGCGATGCCCTGCGGATTTGCAAGGACTACGTGCCCGGCCAGCTGGAGGCACTGCAGGAAGAGTATGAACGGGAAGCTACCAAGAAAGGGGCCAGGGGCATGGAGGGTCTGGTGGAACAGGCTCGACAGTGGGAACAGGCTGGAGAGTACAGCCGTGCAGTCGACTGCTACCTCAAAGTGCGGGACGCAGGAAGCAGCAGCCTGGTGGAGAAGTGCTGGCTGAAGGCAGCTGAACTCTCCATCAAGTTTCTACCTCCCCCACGTAGTCTGGAAGTAGTTCGGGCTGTGGGACCCCAGCTGATTGGAATTGGAAAGCACAGCGCAGCTGCAGAGCTCTATCTGAACCTGGACCTCGTCAAGGAAGCAATCGATGCTTTCATTGAGGGTGAGGAATGGAACAAGGCCAAGCGTGTAGCTAAGGAGCTAGATCCCCGGTATGAAGACTATGTGGACCAGTGTTATAAAGAGTTCCTCAAGAGCCAGGGCAAAGTGGACTCGCTAGTGGGTGTGGACGTGGTGGCTGCTTTGGACCTCTATGTGGAGCAGGGCCAGTGGGACAAGTGCATTGAAACAGCCACCAAGCAGAACTACAAGATTCTGCACAAATACGTGGCATTGTATGCAACTCACCTGATCCGGGAGGGTGGCTGTGCCCAGGCACTGGCCCTGTACGTGCAGCATGGAGCCCCTGCTAACCCACAGAACTTCAACATCTACAAAAGGATCTTCACTGACATGGTGAGCTCTCCTGGGACCAACAGTGCTGAGGCCTATCACAGCTGGGCTGACCTCCGGGATGTCCTCTTCAACCTGTGTGAAAACCTGGTGAAGTCCAGTGAGGCCAACTCTCCAGCCCACGAGGAGTTCGAGACCATGCTGTTGATTGCTCACTACTACGCCACCCGCTCTGCAGCCCAGAGCGTCAAAGAGCTGGAAACTGTAGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAACTACTACCTGCAGATAAGGCCTTCTATGAAGCAGGCACTGCTGCCAAGGCAGTTGGCTGGGAGAACATGGCCTTCATCTTCCTCAACCGCTTTTTGGATCTGACTGATGCAATTGAAGAAGGGACCCTGGATGCCCTTGACCACTCTGACTTTCAGGACACAGACATTCCCTTTGAGGTGCCACTCCCAGCCAAGCAGCACGTCCCGGAGGCTCAGCGAGAAGAGGTTCGAGACTGGGTTCTCACAGTCTCAATGGACCAGCGGCTGGAGCAGGTTCTACCTCGGGATGAGCGTGGGGCCTACGAGGCTTCCCTGGTGGCGGCCAGCACTGGAGTTCGGGCCCTGCCCTGCCTCATTACAGGATACCCCATTCTGAGGAACAAAATTGAATTTAAGCGGCCAGGGAAGGCAGCTAACAAGAAGAACTGGAACAAGTTCCTTATGGCTATCAAGACCTCCCACAGCCCCATGTGCCAAGATGTGCTGAAGTTCATCAGTCAGTGGTGCGGGGGGCTGCCCAGCACCAGCTTCTCTTTCCAGTAACTGGGAGAGTCAGTAGGTTCCATCCTTCATTAAAGTCTTGTAAGTAACCGA EMBV3_05857 GTCAGGCTGTCATCGAAGAACTGCGTAAGTGTTGTGCTCGATATCCCAAGGGAAGATCTC Gene GeneID:777691|MTCP1:NM_001078151:20_cdna Constitutive 0 NULL GeneID:777691 X GENE MTCP1 MGC143114 mature T-cell proliferation 1 EMBV3_26571 GAGCAGCTGGAGAAGCTGCGCGGCTTCAAGACTATTTCACGGATCCAAGACTTCCCAACA Variant GeneID:767988|C3H1orf230:NM_001077049:172_cdna 100^223 1 EMBV3_03416 GeneID:767988 3 GENE C3H1orf230 MGC133677 NCRNA00166 chromosome 1 open reading frame 230 ortholog EMBV3_25371 TTGCCTTCACGTCCAGCTACCGTAAGTAGCGCTTCAGTGAACATTGGAGTCCAGGTACAT Gene BVT0102_028827 + 0 NULL GK000004.2:112810196-112815326 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14760 TCCAGGGTTGTTTTCTCCAAAAAGCAGAGCACAGGAACTGCCCAGCCTGTAATGGATGCT Gene BVV0102_052738 + 0 NULL GK000007.2:19080239-19127027 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05358 CCGGAGCATCACTGGGCTGTGCCAGGAAGAGCACCGCAAGATAGAGGAGTGTGTGAAGAT Gene GeneID:614102|MRPS18A:NM_001101229:350_cdna Constitutive 2 NULL GeneID:614102 23 GENE MRPS18A MRP-S18-3 mitochondrial ribosomal protein S18A EMBV3_09790 CACAACAGACCCTTTGGGCCTATCCTGCTCAATTCTCCCTGGACGACAAATACTCTCAAG Gene GeneID:100296928|LOC100296928:XM_002685771:579_cdna Constitutive 0 NULL GeneID:100296928 2 GENE LOC100296928 NULL similar to nucleolar protein family A, member 3 EMBV3_16814 AGGGATTCCTCAGTTTCAGGCTATTTCTGCTTGATGGGAATACGTGCCCTGTGTTGGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03359 CCGTGTGCAGCTGAGGTTAGGAAATGCTTCTGTTTGGAGTTCCCCCAGCCAGTCTGTTAT Gene BVV0102_047252 + 0 NULL GK000016.2:27549590-27702960 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071922 1 XLOC_043692 NonCoding TCONS_00071922 XLOC_043692 NonCoding NonCoding - 16:27694895-27696261 - TSS53766 1366 1 TCONS_00071922_5 78 0.109077598828697 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00104409168596399 9.72316673433308e-05 9.1840751232955e-05 0 0 0 7.60538292705789e-05 0 1.22727817480773e-05 0 0 0 0 0 5.2816246700336e-05 0 noncoding 0 0 0 0 0.0120090934140547 0.94142384126394 0.013154384539912 0.781747350324271 GGCGGAGGCTAGCAGTGATGACACCAGCTAATTAGTGGCTGCAGAGTGCTTCGAAAACATAGGTGCTCATGTTATTACTGCTGTAATTAAGCCTCCCCTTAGCACTGTATTTTATGATCAATCTTCATCAAGATACCTGTGGCAGAGGGCAGGTGCTGGTAAGCTACAAGGGCAGTGACTTCTGTGTGACCCGGAGTTGGATTGCCCACCCCAGAGTCACAGTGTCCACTCATGGTCACCAGAGCCTCTTTAGATCCCAGGTCTGCTAAACAGAGAAGGAAGGCAGGGCCACCAGCCCCCACTGCCCTGGTCAGGACTCCACAGGACCCACCAGCGAGTGCCTGATGACCTGGCTGCAAGGGCAGCCACAGCCTTGGGATCCCTCCCTGAAAATTTTTATACTCTGGGGGCATGCCAGCAAGGTGTTGGCCAAGACTAAGCATTACTGGGCTAAAAGTCATTCTTGCCATCCTTGATGACAGCAATCAGCAGGGGGAGGTACCAGTAATGTAGAAGTGGGGGTGGGGGTTGTGTTGGGAAAAAGGCAAATTGAGTTCTAGTAAGAACTGAGGGCTGGGACAGAGTACAGAAGCCTCATTCGAGAGGCCAGAGTGAGAGGTGGAGAACACAGAGGCAGGAGCTGGCACCCCTCCATCTTACTGGAGACTCCACACACACGTGCTCCAGGCCCCCGGCTCTCGCACCTCCCCGTGGCCTGGCCCAGCCACCAGTGTGGACCAGCATGGGCAGCTCTGGGGGACTCATTGGAGACGCAAGTTCTTGAGCCCCACGCCAGACCTACAGACTCAGAGATTCTGGGGTGGGGGGCAGCAGGCTAATGCTTTCACAAACCCCCAGGGGCTTCTGAGCAGTGGTTTGGAACCACTGACCAAAGATTCCACAGCACTTGGGGATCACGGGATCCACAGAGTCACACAGAGGGCACAGGGAAACTGCAGGTAGAGGCTCCTCCGGGCATGCAGAGGGGCCTTTCCCAGGAACCGGCCATTTCTGATGGGAATCGCCACCCATCAGACTTAACACAAGTCTGAGTTTATTTACTTTTGAGTGGTGACAAGGGCTTGCCTTGAATCATCCATACCCGCTTTCTGTCACCGCCATAACCAATAATATGCATTTGGGAGTCAGCGGGCAGGGTATATCAGTGGTCAGCACCTTTGGAACAACGCATGGGCTGGAGCCTGTGAACTTGGGCTTCACTGGCACATGCTACCAGGTGGCCAAGGTTGAGAACCCAGGGGGTAGGGGTAAGAACAGCAGGCAAACGTATTTCTACATAACTAGAATAACAGACTGGCTGGGGGAACTCCAAACAGAAGCATTTCCTAACCTCAGCTGCACACGG TCONS_00068859 . 3' 4840 TCONS_00068859 . 3' 6205 EMBV3_38202 GGCCATCCTGGGAGCAGTGGAGAAAACACAGCTTCAAGCAGCCATCAAAAGTTACGAGAA Gene GeneID:618483|LOC618483:XM_002687759:78_cdna Constitutive 0 NULL GeneID:618483 5 GENE LOC618483 NULL hypothetical LOC618483 EMBV3_36252 GTGATCATGAAGCAGAGGGTGTGTGTTGGGTTGCTAGTGGTGTCCTGGGTTGGAGGTTTT Gene GeneID:785969|LOC785969:XM_002693595:78_cdna Constitutive 0 NULL GeneID:785969 15 GENE LOC785969 NULL similar to olfactory receptor MOR231-1 EMBV3_23855 CTCCAATCTCTCATTAGCTGGGAGCACTAGGCTGTCTTTACCCCTGGTATCTGAGCACCA Gene GeneID:617995|COPS7B:NM_001046612:193_cdna Constitutive 0 NULL GeneID:617995 2 GENE COPS7B MGC137121 COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis) EMBV3_34059 AGACGGCGCTGCTGCAAGACGGGAGAAGAAAGAAGCCAAAGGAGGTCCTGGTAGCTGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19958 ACATTCTAGTACCATCAGACCCTGCATTACCCCTCCACCTTCAGCACCAGGTAAAAGAGG Gene BVV0102_013757 + 0 NULL GK000004.2:17362936-17509341 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186122 1 XLOC_112175 NonCoding TCONS_00186122 XLOC_112175 NonCoding NonCoding - 4:17500537-17500850 - TSS138490 313 1 0 0 0 0 0 0 0.000148567464308539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.165634198831995 0.290659803135329 -0.0355673636149447 0.467752902171039 GAATGTAACTGTGATAAGAAAGTGTTAGTGTTTTTTTTTTTTTCTTGACCATGGGCCACACAGTTCTCCTTTCGACCAAAAAGATTCATTCAGAAGCACAGAATCATAAAGCCTAGAGTCCTCTTATTGTTAATGGGTCCAAATCCCATTCACCAGATCCAGAGTTGGTGGTAGTTGTGATCATGGTGTTCACGTTCCTTTCTTGAGCTCCCCTTTCTCTGTCACCTTCCCTCTTTTACCTGGTGCTGAAGGTGGAGGGGTAATGCAGGGTCTGATGGTACTAGAATGTAATACGGATTTGCACTGCACTTAT TCONS_00180948 . 5' 8027 TCONS_00180948 . 5' 8027 EMBV3_31860 GCGGTCAAGCCTTAGTGGTGAACGAAAGGCTCATCAAAGAGGATCAGATAGAGTATCAGG Gene GeneID:616045|DOCK9:XM_002691970:29_cdna UTR3_Alt 2 NULL GeneID:616045 12 GENE DOCK9 NULL dedicator of cytokinesis 9 EMBV3_12423 CTCCTGTTTTGCGAATTGTGGGAAAGGTCGACAATGCAAATGTGTCAAAGACTTCCATGG Gene BVT0102_030271 + 0 NULL GK000024.2:57361217-57380075 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140662 TCONS_00140664 TCONS_00140660 TCONS_00140663 TCONS_00140661 1 XLOC_085177 Coding TCONS_00140662 XLOC_085177 Coding Coding ATP8B1 24:57378875-57487860 = TSS104929 5449 1 TCONS_00140662_6 1251 28 0.950258753578507 8.89759081295707e-05 5.8333793336858e-103 2.18772146887938e-05 3.74336201569236e-13 2.04674385015073e-28 2.05884369965159e-22 6.51678085244547e-26 1.33073324146742e-51 0.000101095461443542 8.55009156267771e-18 8.23138836961631e-18 3.17850179470081e-06 5.35672099293089e-31 7.390879126664e-07 1.60703407786588e-05 0.000634399514804003 0.000801577245312742 0.000546450323020953 5.35185740203846e-05 4.72357815930711e-18 1.33703250582032e-13 6.99163549810263e-20 3.23431218127779e-15 0.000144315256039243 7.09461115648001e-25 7.62535863676808e-05 3.66265287760331e-14 3.81061205495016e-14 6.38781428392916e-12 1.31385274464616e-15 NM_001192839.1 ATP8B1 Bos taurus ATPase, aminophospholipid transporter, class I, type 8B, member 1 (ATP8B1), mRNA. 0.0 7506 100.00 0.76362635345935 NM_005603.4 ATP8B1 Homo sapiens ATPase, aminophospholipid transporter, class I, type 8B, member 1 (ATP8B1), mRNA. 0.0 4969 88.47 0.710405579005322 TCONS_00140662_6 sp|O43520|AT8B1_HUMAN AT8B1_HUMAN Probable phospholipid-transporting ATPase IC; 0.0 2380 91.61 0.999200639488409 4 coding 1 0 1 1 0.129630244532482 0.313166534695517 -0.0133431118924879 0.801883758785781 ACTGCGAGAGCCAGAGGAGCCGCCGCCAACTGGACACGCTTCCCGGGGCCCCGGCCAGCCCCGTGCGCCATGAAGCGCTAGCGCGGCGGCCAGCGCTGGGGCCGGCGGGCGGCGGCGGGCAGGTGCGCACCGAGCGCGCGGGGAGGCGCACACCCGGCGGATGCCCCAGCCGGGGCCCAGCGAGCGCCAGGTAGTTCCAGTTTGCCAGCAGAATGAGTACAGAAAGAGACTCAGAAACGACGTTTGACGAGGATTCTCAGCCTAATGATGAAGTGGTCCCCTACAGTGATGATGAAACAGAAGATGAGCTTGACTACCACGAACCTGCGGTGGAACCACAGCAGAATCGGGTTAACAAAGAAGCGGAGGAAACCCGGGAGCCGTTCAAAAAAGACTGTACATGGCAAGTCAAAGCCAATGATCGACGCTTCCACGAACAACCTCAGTTTATGAACACAGTATTCTTTTGCATTAAGGAGAGCAAATATGCGAATAACGCAATTAAAACATACAAGTACAATGCGTTGACCTTTCTACCAATGAATTTGTTTGAGCAGTTTAAGAGAGCGGCCAATTTCTATTTCCTGGTCCTTCTCATCTTACAGGCAATCCCTCAAATCTCGACCCTGGCATGGTACACCACGCTGGTGCCCTTGCTTGTGGTGCTGGGCGTCACGGCCGTCAAAGACCTTGTGGATGATGTGGCGCGCCATAAAATGGACAAGGAAGTCAACAATAGGACGTGTGAAGTCATTAAGGATGGCAGGTTCAAAGTTGCCAAGTGGAAAGACATTCAAGTCGGAGATGTCATTCGCCTGAAAAAAAATGACTTCATCCCAGCTGACATCCTGCTGCTGTCGAGCTCCGAACCTAACAGCCTCTGCTACGTGGAAACGGCCGAACTGGATGGAGAAACCAACTTAAAGTTCAAAATGGCACTTGAAATCACACACCAATATCTCCAAGAAGAAAATTCATTGGCAACATTTGATGGTTTTATTGAATGTGAGGAACCGAATAACCGACTAGATAAGTTTACAGGAACACTATTTTGGAAAAACACAAGTTTTCCTTTGGATGCTGATAAAATTTTATTACGTGGTTGCGTCATCAGGAACACCGATTTCTGCCATGGACTGGTCATTTTTGCAGGTGCTGACTCTAAAATAATGAAGAACAGTGGGAAAACCAGATTTAAAAGAACTAAAATCGATTACCTGATGAACTACATGGTTTATACGATCTTTGTTGTTCTCATCTTGCTTTCTGCGGGTCTTGCCATCGGCCATGCTTACTGGGAAGCTCAAGTTGGCAATTTTTCCTGGTACCTCTATGATGGAGAAGACTCTACGCCCTCCTACCGTGGATTCCTGAATTTCTGGGGCTACATCATTGTTCTCAACACCCTGGTGCCCATCTCTCTCTATGTCAGTGTGGAGGTGATTCGTCTTGGCCAAAGTTACTTCATCAACTGGGACCTGCAGATGTACTATCCTGAGAAGGACACGCCTGCAAAGGCGAGAACCACCACGCTGAATGAGCAGCTCGGGCAGATCCATTACATCTTCTCCGACAAGACGGGGACCCTCACGCAGAATGTCATGACCTTTAAGAAGTGCTGCATCAATGGGCAAATTTACGGAGACCATCGAGATGCTTCTCAGAATAGTCATAGCAAAATAGAGCCAGTGGATTTTAGCTGGAATGCGTTCGCCGATGGGAAGCTTGAATTTTACGACCATTACCTCATTGAGCAGATCCAGTCGGGGAAGCAGCCGGAGGTGCAACAGTTCTTCTTCCTGCTGGCCATGTGCCACACGGTCATGGCGGACAGGCTCAACGGTCAACTCAACTACCAGGCAGCCTCTCCTGACGAGGGCGCTCTCGTAAGCGCCGCCAGGAACTTCGGCTTTGTCTTCCTCGGCAGGACCCAGAACACGATCACCATCAGTGAGCTGGGCACGGAGAGGACCTACCATGTTCTTGCCCTTTTAGACTTCAACAGTGACCGGAAGCGGATGTCTATAATTGTAAGAACCCCAGAAGGCAATATCAGGCTTTACTGTAAGGGCGCCGACACTGTGATTTACGAACGGTTACATCAAACGAGCCCTATGAAACAAGAAACGCAGGACGCCCTGGATATCTTTGCCAATGAGACTCTTAGAACACTGTGCCTTTGCTATAAGGAAATTGAAGAAAAAGAGTTTGAAGAATGGAATAAAAAGTTTATGGCTGCCAGTATAGCCTCAACCAACCGGGATGAAGCTCTGGATAAAGTATATGAGGAGATTGAAAAAGATTTAATTCTATTAGGAGCAACAGCTATTGAAGACAAGCTGCAAGATGGAGTCCCAGAAACCATTTCAAAACTTTCAAAAGCTGACATTAAGATCTGGGTGCTCACTGGAGACAAAAAGGAAACTGCTGAAAATATAGGATTTGCCTGTGAACTTCTTACTGAAGATACCACTATCTGCTATGGGGAAGATATCAGTGCTCTTCTTCATACAAGGATGGAAAACCAGAGGAACAGAGGGGGAGTCTATGCAAAATTCGTACCCCAAGTGTATGAACCTTTTTTCCCATCTGGTGGAAACCGTGCCTTAATAATCACTGGTTCTTGGTTGAATGAAATCCTTCTCGAGAAAAAGTCCAAGAGAAGTAAGATTCCGAAGCTGAAGTTCCCCAGGACAGAAGAAGAGCAGCGACTGCGGACGCAGAGCATGAGGAAGCTGGAGGTGAGGAAGGAGCAGCAGCAGCAGAACTTTGTGGACCTGGCCTGCGAGTGCAGCGCGGTCATCTGCTGCCGCGTCACCCCCAAGCAGAAGGCCATGGTGGTGGACCTGGTGAAGCGCTACAAGAAGGCCATCACGCTGGCCATCGGGGACGGCGCCAACGACGTCAACATGATCAAAACTGCCCACATCGGTGTTGGAATAAGTGGACAAGAAGGCATGCAAGCGGTCATGTCCAGTGACTATTCCTTTGCACAGTTCAGATACCTGCAGAGACTGCTGTTGGTGCATGGCCGGTGGTCTTACATAAGGATGTGCAAGTTCCTGCGATACTTCTTCTATAAAAACTTTGCATTTACTTTGGTTCATTTCTGGTACTCCTTCTTCAACGGGTACTCTGCACAGACCGCGTACGAAGACTGGTTCATCACCCTCTACAACGTGCTCTACTCCAGCCTGCCCGTGCTCCTCATGGGGCTGCTCAACCAGGACGTGAGCGACAAACTGAGCCTCCGCTTCCCCAGCTTATATATAGTGGGACAGAGAGACTTGCTATTCAACTACAGGAAATTCTTCGTCAGCTTGCTGCATGGGGCTTTAACCTCGCTGGTCCTGTTCTTCATACCTTATGGAGCCTATATGCAGACCATGGGGCAGGATGGAGAGGCGCCCTCGGACTACCAGTCTTTCGCCGTCACGATTGCCTCTGCTCTCGTAATAACAGTCAACTTCCAGATTGGCTTGGATACTTCTTATTGGACTTTTGTGAATGCTTTTTCAATTTTTGGAAGCATTGCACTTTATTTTGGCATCATGTTTGACTTTCATAGTGCTGGGATACATGTTCTCTTTCCATCTGCATTTCAATTCACAGGCACAGCTTCAAATGCTCTGAGACAGCCGTACATTTGGTTGACCATCATCCTGACTGTTGCTGTGTGCCTGCTGCCCGTTGTTGCCATTCGCTTCTTGTCAATGACCATCTGGCCATCGGAAAGCGATAAGATTCAGAAGCACCGGAAGCAGCTAAAAGCCGAGGAGCAGTGGCAGCGGCGCCAGCACGTGTTCCGCCGGGACGTGTCCACGCGGCGCTCGGCCTACGCCTTCTCGCATCAGCGCGGCTACGCCGACCTCATCTCCTCCGGCCGCAGCATCCGCAAGAAGCGCTCGCCCCTGGACGGGGTCATCGCCGACGCGTCGGCGGCGTACAGGCGCACCGCGGAGAGCTGAGGCGCCGGCTCCCGGGTGACCTGTAGAACAGTCACACGGAGGAAACGTCTATGGCTTTTTTTAATGAGAGACTGGGAACTTTTTGTAAAAAACTGAACTTGTCACGGGGATGCTGAAGACAAGAACCTTTTCAGCAAACGACTTGGTTTTGCTGTGGCAATCGTTCAACCTAAGAAGACCTTTCGAAAAGTCAGATTATTCAGATGCTGATATTTCATTATGATTCAAAGTGAACATTTTAAACTCCGTCTCAATCTAGGACAAGAGAATTTGAAAACGTCTTCAATTTCAGTTCAAATGGTATCGTTTTATAAAATTAGTAAGCTCTTCCTGTCTGGGAGCTTTGTCAGGAATTTCCCAGAGGCTCTTTTTTCTTCCTGGAGTCTACCTTACATAACAAAGACCTTATAATAGCAGTGACAGAAGACTCATGAATGTTCATCTCCTAAAAGCTAAGTGGTCTTTTTCAGAGTTGATAACGGGACTGCATGATTTCATGTTCTCATGTGGATCTAATTCAGCTCAATCAACAAAAATGATTCACATTTCATAAACACAAGGTCTGAGTCTGTTTCGGTTTACTACCAGGTTAAAAAAGGACATTACCTTCGTTTACTCTCACTATTGTATATTGTTTCAGCCACTTCCTGTAGAACAAGTGAGTTTATTGTCTATTATCGATTTAAAAAAACATGCATTTATTTATGGTTTTTTTTTTTTAAAGCGCTTTTAAAAACTGAGGGTATCAGTGATAAATGGCAGAATATTCTGCAAAGCTTTCTTTTGAAAAGCAAACTTTTGTGCCTGCCTATGTGTAAAGTGTTTTATAAGGGACATAAAACAGAGACCTCATTCTTTTCTACTTAAGAGAAATGGCTTTTGGTAGCCATATTCCTAATAGTGTATCCTTCTAAAATTGAAGATGACTTTGGCAATTATGGAAACTGGCCTCCAAGAGGTAAGAGTGATTTATCCAAGGGCTTTTCTCATCCTGTGTTTCACACTTTCATTTTCGCATTCCAGTGAAGATACAGAAGTGTCTTCAATAATTCTGTTCCTTACCATTAGGTTGTGAATGTTCACAATATTCATTCGAGTTCTTTGTGAGGAAATCGCAGTGTGTAAATAGTTCATTGTCCAGGTATAAGCAAAGAATGTTTAGCTCTTTATTCTATGGAAGTAAATTTCTGGAAGTTTACAACTTTTGTCTTGTAAATAAACAAAAAATTGTAAGGTTATTTTTTTTTGGTAAAGAAAAGTTAGCTTGTGTAATTCTGTCAGTTTCCAATTTCTCTCCTGTTTTGCGAATTGTGGGAAAGGTCGACAATGCAAATGTGTCAAAGACTTCCATGGTTGGGTGCAATATTAATTTTAAAATGCAAATTGTTTTGGATAAATTATTTCTATATTCTGTAAATCTGAGATTAATGTATATTTTTGTTTAAAAAATAAACTCTTTGGTAAAATTTTGGGAAGTACAA EMBV3_27530 GCCAAGAGTTGGTCCTTGATTTAGCCTGTTACTGCTTCTCTATCACCATCCCTCTCCCTG Gene BVV0102_379906 - 1 EMBV3_34757 GK000022.2:48337781-48370123 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35387 ATGATTCTGCCGTCTTCTGTGCGTGCAGTGTGGAGTAGCTGGTTACAAGAGGCACTGGTT Gene GeneID:519260|RABGAP1:XM_002691575:81_cdna Constitutive 1 NULL GeneID:519260 11 GENE RABGAP1 NULL RAB GTPase activating protein 1 EMBV3_37079 AATGGAATCGTGATCTTCAGTACAGGGGCAGAGTCCGGGTCCAGCTCAAACAGGAAGATG Gene GeneID:514960|SRP19:NM_001034478:9_cdna Constitutive 2 NULL GeneID:514960 10 GENE SRP19 MGC128826 signal recognition particle 19kDa EMBV3_15710 GCAGCCGCCCAACGTGTACCTGGAGACCAGGTCGAGGTGGTGCGTCTATCTATGGCAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15383 TCGACGGAAGGCAGCGCCGCGGATCGAATGGTAAAAGCCATGGAAGTGGATGTAGAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11076 CTGGTCGTCCTGGACTTCCTGGGAGATGACTGGGGGTTAAACGGGAACAAAGACAGAGCT Gene GeneID:789661|LOC789661:XM_002695405:22_cdna Constitutive 0 NULL GeneID:789661 18 GENE LOC789661 NULL similar to Putative uncharacterized serine/threonine-protein kinase SgK110 (Sugen kinase 110) EMBV3_38181 ACACATCCATTGAGTCTCTCTCTGTGCCCCACACACATCCCGCAAGGCATCCTAACTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23297 CAGGACTATGAGGATGCGAACACTGCCTACTTCTGGAATCGCTTCAGCTTCTGGAACTAC Gene GeneID:618468|SPAG4:NM_001076507:1345_cdna Constitutive 1 NULL GeneID:618468 13 GENE SPAG4 MGC133822 sperm associated antigen 4 EMBV3_20098 GAGGGGAATTGCCTGGTGTTCGCTCTAAGTTCCATGTCCTTTTTCTCCTCTTTGTGGCCT Gene GeneID:615421|ZDHHC15:XM_002699987:78_cdna Constitutive 0 NULL GeneID:615421 X GENE ZDHHC15 NULL zinc finger, DHHC-type containing 15 EMBV3_06268 AGCCTTGTGGATCATTGCCATTCCCATCCAAGCTAGGAAGTCTCAGCAAACAGAAATGCG Gene BVT0101_010524 + 0 NULL GK000018.2:13009551-13017743 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082308 1 XLOC_050967 NonCoding TCONS_00082308 XLOC_050967 NonCoding NonCoding LOC100848507 18:13009445-13012783 = TSS62112 1862 2 TCONS_00082308_3 124 2 0.442613125561882 0.00235286532278476 0.0025957465837481 0.00254459645795759 0.00113724992857635 0.001739416738521 0.00157336544064735 0.000786121490691611 0.000711545354352504 0.00276706356340587 0.000669544105965364 6.76182886227381e-05 0.000368705969628713 0.000215735533161135 0.000937261760220572 0.00224461371739002 0.00306386022360664 0.000454733844320298 0.000336881092515434 0.00192174785888456 0.00110330317314299 0.000324441949821576 0.000342737820522662 0.00132535922519882 0.0020528121816795 0.0022623604358309 0.0019524491186078 0.00122406568024682 0.000830522704038298 0.000205968626565899 0.00082014591039603 XR_138926.2 LOC100848507 PREDICTED: Bos taurus uncharacterized LOC100848507 (LOC100848507), 0.0 3012 100.00 0.896348012889366 0 noncoding GAAGTCCCCGTCTGGGGCTTGGTCCAGCCCACCAGAGGGGACCCGAAAAGTCTTGGGCTGGCGTAGCCGAAAAGCCCCCCGCCTCGACCGCCCTTCAGGGTTCATTAGGTCCCTCTCCTCGCAGCCCCACCGGTCCCAGGCGGCCCTGGCCTCCGCTCACCTGAGGACTGCGGGCCTCCAGTCGCGCGCCAGTACAGAGCACGGGAAAGGAATGTCACCGACAAACGCACGACGGCCGCCCCTTCCCGACTGAGCGCACACGACAGAGAGAAGGATGTGATTACGAGATTATGGAAGCAGACCTCTGCCTGGATGAGCCCAACTCCTTTCTGGTCCAGACTCACGTCAACACCCTGAAGTGCTGGAGCAACTGCCCAGAGCCCATATGGAAGCTAAGAATCCACAGACCACTCCAGTGTTTCTGGTCAGTGTTGCTCTTTCTACTCAGATTGAAAAATAATGACTCCACCAGTTCCCTGGGCCCAGCCTCCACAAGGTCCTGGCTCTTCACTACTTCCCTAAGGAGGTCTCCAAGCAGAAAAGAGGCTGCCTACCCCAGTCCACAGAATCCCATAAATAGGGAAGTGCATCTTTTGACAAAAGTAACAATTCTGGACTTCAAACCTTGACTATCTCAGCTCCGGGCAATTGAAAAACAGCTTGTGACTGCCTTCCCTGTATCTGGGTGTTTTTTCAAACTGTCCTCTAGCCTGTTATCAGAACTCGCCTCCTGCAAGTGGTAACACAGAAACAAAAGAAGAGTCATGCTTCACTCACCTATTTAATATTAGTATTTAATGACCCCATTGACTCCGTATCACATCACACAGAGTACTTCACAATCCAGGCCTAACCTCCAGGTCTGGCAGCATCTCCTGTCTCCAAACATCTCTCAATGGGAGCCACCCAGTTCCTTAGTGGGAACGCACCATGCCTTGTCACATCCCTGCCCCTTGTTCAAGCTGTCTCCTCTGCCAGGAAAACCCTCTTCCCAGTCTGTGCCAGTAAACAGTCACCCCTTCCACCTCGTCCTCAAATGGTACCCCTTCCCGGAATGTCCCTTTATTACTGCACCATCATTTGTTTTATTACAAACACGTGCTTCCTCTGGTAGCAGCCTCACCAGCTGTATCCTCTGTTGCATGACAGACATGCTAGCATACATCACGTAATAGGCAAATGTGTACTGACTACACGTTGGCTGAGTGAAGAACAACAAACTGGCTAGATGGCTACAAAGGGAGGAATGTGAACCAAACAGATTTAAAGAAGCCTTGTGGATCATTGCCATCCCCATCCAAGCTAGGAAGTCTCAGCAAACAGAAATGCGTCAACTCATGTGATAAGTATTTACAGAATGCCTGACTAACCTACATGCTATGTTCTACGTGGATCCATAGATTATAAAGCATGCACTTTGCTGCTGTATATTTCAATTTGTTTTTTTTTAATCTGTCTACTCATTACTAGGTCCTACTAATAAAATATTCTTCTAGAAAAGTTTTAGGGTATATTAAAATGTACAAAATAGTTTGGTTAAATTTCCATCTTTTTAAGAATGGTTAACCATGTTCATAATTTGAATTATGTATAATTCAGTTAAAAGATATACCTAAATCTACATTTTTGACAGCAGGAACAATAAAAGACTGTGTACAATAACCCACAAAGATGTTAAAGGTTTGAATTTGTGCTGACCATTAGAACAGAAAGAAATGGATGACCATGAGAACTGTGGTAATCCATAATGGGGGAGAAGAACCAGAGGGGAAGACTTAGGCTATCGCAGAAAACAATTACACATTGAACCCTGAAAGCTTTGTGTCCTTGAAGCTTTTACAGCCCGTTATGTAGAACTGGAT EMBV3_06612 CCTTTACACCCCGTGGTGCCTAATCCTTATACTCTATTGTCTGAAATTCCTGAACCAGCC Gene BVV0102_120946 - 0 NULL GK000028.2:13180404-13223727 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091323 TCONS_00250681 TCONS_00022895 TCONS_00205125 TCONS_00103962 5 XLOC_056098 XLOC_153624 XLOC_013565 XLOC_124587 XLOC_062257 Coding TCONS_00250681 XLOC_153624 Coding Coding - X:46269176-46273679 - TSS187902 4503 2 TCONS_00250681_2 365 0.999555851654453 1 0 2.36119658886422e-05 2.1086683763045e-05 2.16948479100415e-05 1.42788878156211e-05 2.61427002351837e-05 2.68795083046517e-06 7.21866209347166e-06 1.43830008668515e-05 2.01156328324481e-05 0.00174446471321109 0.000747742750338526 0.000996208555305522 2.01687563248018e-05 0.000109124334674336 5.68121288656448e-05 0.00286544842017628 0.00164583228491385 0.00207458672698368 4.936296339302e-05 3.15982728674726e-05 2.12284824735235e-05 0.00216492780167564 0.00224806471513175 0.00219402234164106 7.55828568237162e-05 3.24893281843063e-05 2.81098692640267e-05 0.00138681684016724 0.00126068195188985 0.0018493090480885 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1364 88.88 0.232289584721297 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 8e-23 114 65.17 0.127248500999334 TCONS_00250681_9 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 4e-09 58.9 43.94 0.17877094972067 1 coding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 CTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAACCTTCAGCTCCCTCCTGTCCTCTTACTTTGTCCCTGTACTGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACGACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATTGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAAAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGTGCAGAGCAGCCAAAGAGACTGAGGAACAGCCACACAAGTTGTTGCCTCTTTATGAAACACCCACCGGGAGAAATAATCAGTCTGTGAGAGTTAATAAGCCTTTCTTTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAAGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGATGTGATGTGTATCTTGGGACAAATGCTGACTCCCGAGTCAAAGACTCGAGTTTTGGGAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATAAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGTGGTCCCAACTATAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATTGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGTGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGGAGGAGAAGGAAGCTCCTGGTAAATTCCTAGATAGACTGAGAGAAGCCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCAGCTCCAGATATCCACCGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTGTTTAGATACTCTGTTACAACTGGCTCAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAAAAAAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACATTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACAGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCTCGGCTTCATGTCTGCAAAGGACTACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCTGGAGTCGGACTCTCAAGACAATCAGGACTGAAGGTGCCCGGGGGTCCCCACACAGGCTCCCGTCCTAATTACACCTGAGGAATCCCGGGTATTAATAATTGTGGGAGGCCAATCCGTCGATTTTCTTTTAGATACTGGGGCAACTTATTCTGTGCTTACTCAAGCCCCTGGCCCACTTTCTTCCCGATCTGCTTCCATAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTGATCATGCCAGAATCTCCCTCACCCCTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTTCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCATTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAAGAACAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATTGTAAATGGAGACTAGTTCAAGATTTACGAATAATAAATGAGGCTGTATTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTCTATTGTCTGAAATTCCTGAACAGGGCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTAGCAGAAGAAAGTCAATTTCTATTTGCCTTCGAAGACCCTACGCAGTCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCGTGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTTCTCTGTGCTGAGACAGAGGAAGCTTGTTCACGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAAGAGAAAAGGCTCAGCTTTGTCAACAATATCTAACAATTTGTTAGATATCTGGGCCTAATCATATCAGAGGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCATCCCCTACCTATAACTTTAAGACAAATGAGAGGATTTTTGGGAATCACAGGTTACTCTCACATTTGGATTCTTTGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACTGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTTTTCAGACTGCTCTCCCGCAAGCTCTAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGATGTGGCATTGGGAGTTTTGACACAACTCCAAGGGCCTCACCGGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCATGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGTGGCTTTATTAGCACCTGAAGCTTTAAAAATATTTAATGGACAAAACCTTACTGTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGAAAATTTAAATCCTGCCACTTTCCTTCCTGAGAAGGAAAATGAAACATCTGATCAAGATTGTTCTCAATGCCTAACTTTAAACTATGCAGCTCGGGAGGATCTAATGGATACCCCAGTAGACAATCCTGACATGGGAATATTTACAAATGGCAGTTCTTTTGTTCGGGATGGAAAGCGTAAAGCAGGTTACACTGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCAGTTAGCGGAGCTTGTGGCTCTGACCCGAGCTTTAGAGTTAAGCAAAGGGCAGTGGATGGGCCTGATAATCTATGTGAGTTTTCTTCTACTGACTCCAAAAATCCTAAATCTGCCGTTTGATCCTCAAGACAATGCCTTCCTGTCCTGGGCTCACTCCTACGCTGCATTCCACAATCGTTCTAACTGCTGGGTCTGCGGAGCACTCCCCTCTTCATCAGTGGAAGGCTTCCCAAGGTGGACATCCCCAATTCAAGGAAAAGACTTCGTCCAGGTCTGTGAATATCTTTGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGCTGCAACACGTTGCACTTTAACTATGGACATAATGTGACTTTTAATTTTGATTCTGTTTGTTTTGTTTTTGCTGTTTGCTCCCTGCATCTGTAACTGTATAACTGGATTTGTTTCTAGCTGCATGAAAGCTTTTAAGTTACAAATGGTTGCTCAAACTCCTGCAACAGCTGTAGCTTCCTCCAGCTACTCTTTGGGGCCCCTGGATCAGATAGCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACACCCCTTGTCAGCTCGGAAGCAGTTATGGAACAAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGAGAGTCATTTCCTAGGTAGGTTGATAGGGAGTCTAGGGGTCCCCAAGGAGAGAGGGGTCTGAAATTCTCAAGGAGGAAGAAAGGACAAACCTTTCCTTCTCTACATTTCTTAGTATTATATAACAATAATGTATCCTGCCTGAGGACAGTCTCTGGACTAAGGACAGTCTTTGGGTTAAACCTTCTGGCTAATTCTGTTATCTTAAAGTGTAAATTATGGGAGTAGGTGTGGTGAGGTCTTTACAACCTCCAGACACTCTTTGGATTCATTGGAGAGTATATAACTTCGTTGTTAACACTAGCAAGCGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGTGATCAAGCCTCGTCTCTGGCCCTGGGTTGAATTCTTCTCCTCTGGGGGCCAAGAAT TCONS_00244298 . 5' 755156 TCONS_00244298 . 5' 755156 EMBV3_28909 TACAGCAAGAAGCACTTTCGGATCTTCAGACGGTGCCTGTGGTGAGGTGAAGCTAGCTTT Variant GeneID:518897|CHEK2:NM_001034531:59_cdna 657^895 2 EMBV3_29748 GeneID:518897 17 GENE CHEK2 NULL CHK2 checkpoint homolog (S. pombe) EMBV3_29182 TATTTTGTAGTTAAGATGTAGAACTTTCACCATGCAGACTTTATACGTATGTCAGCATAC Gene BVV0102_452960 + 0 NULL GK000026.2:22701501-22713897 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150501 TCONS_00150504 TCONS_00150503 TCONS_00150502 TCONS_00150499 1 XLOC_091890 Coding TCONS_00150502 XLOC_091890 Coding Coding NOLC1 26:22692691-22704127 j TSS112718 4765 1 TCONS_00150502_4 587 0.163064008394544 14 0.584521206821163 0.000447315995501303 4.93832143407656e-05 0.00060584763442554 1.31375746723218e-16 0.000676573517306012 2.30789017283252e-15 2.73497593790017e-10 8.17356011748561e-08 0.000808469926347358 2.07385990204426e-10 9.23800552248077e-11 1.09728572421487e-08 5.61968527914288e-09 0.00069191400964052 8.59678805473252e-13 5.55588185616743e-08 6.41369149925146e-07 1.81207417296858e-19 1.35764329798731e-09 9.05090557892647e-05 0.000249152819338116 2.4678056812254e-28 2.56646861737237e-15 0.00134525799459675 0.00172798828933226 0.000976948057832248 0.00096844204400324 7.42730872904801e-08 1.89505426925335e-09 0.000131391141450169 NM_001075608.2 NOLC1 Bos taurus nucleolar and coiled-body phosphoprotein 1 (NOLC1), 0.0 2309 100.00 0.268415529905561 XM_005270273.1 NOLC1 PREDICTED: Homo sapiens nucleolar and coiled-body phosphoprotein 1 (NOLC1), transcript variant X1, mRNA. 0.0 1422 77.61 0.368730325288562 TCONS_00150502_4 sp|Q14978|NOLC1_HUMAN NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1; 1e-92 303 74.22 0.689948892674617 1 coding 0 0 0 0 0.0184963330307638 0.931227084916235 -0.0405370262266936 0.438540272393166 CTCTTCCGGTTTCTTGAGTCGTGTGCGTCCGCGACGGTAGTGACGCGTATTACCTGGAGGATGGCGGACGCCGGCTTACGCCGCGTGGTTCCCAGCGACCTGTATCCCCTCGTGCTCGGCTTTCTGCGAGATAACCAGCTCTCGAGCGTGGCCAATAAATTCGTCAAGGCAACAGGCGCTACCCAGCAGGATGCCAACGCCACTTCCCTCTTGGATATCTATAGTTTCTGGCTCAAGTCCACCAAGGCTCCAAAGCGGAAGTTACAGGCAAATGGACCAGTGGCTAAGAAGACTTCATCCAGTGACAGCAGTGACGACAGCAGTGAGGAGGAAAACCAGGGGCCTCCAGCTAAGAAAGCTGCTGTACCTGCCAAGCAGGCCAGTCTGCTTCAGCATCCTGGAAAGGCTGCAGTCAAAGCATCCGAGAGCAGCAGCAGCAGCAGCAGTGAAGAATCCAGTGATGAGGAGGAAAGAGACAAAAAGAAAAAGCCTGTTGAGAAGGGAGTTAAGCCACAGGCCAAGACAGTCAAAGCTCCTCCTAAGAAGGCCGAGAGCTCTGATTCCGATTCTGACTCAAGCTCAGAGGACGAGCCACCAAAGAATCAGAAGCCAAAGACAACACCTGTGGCAGTGAAAACTCAGGCTAAAGCCCAAGCCAAACCAGGTACATCAGCTCGGCCAGCACCTAAAGTCGCCAACGGCAAAGCAGCTAGTAGCAGCAGCAGCAGCAGCAGTGATGATGACTCAGAGGAGGAAAAGGCAGTAGCCATCTCTAAGAAGACCATACCTAAAAAGCAAGTTGTGGCTAAGGCTCCAGTGAAAATGGCTGCCGCACCTGCCCAAAAGAGTTCCAGCAGTGAGGACTCCTCCAGTGAGGAAGAGGAAGAGGAGCAGAAGAAAAAGCCCATGAAGAAAAAACCAGGTCCCTATAGCTCAGTCCCCCCGCCTTCTGTTCCCCCACCCAAGAAGTCCCTGGGAACTCAGTCCCCCAAGAAAGCTGCAGAGAAGCAGCAGACTGTGGAGAGCAGCGAGGAGAGCAGCGATGAGTCTGATTCAAGTTCTGAGGAAGAAAAGAAACCTCCAGCTAAGGCAGTCATCGCCAAGGCAGCTACTAAAGCAGCTCCAGCAAAGAAGGCAGCAGAGAGCTCTTCAGACAGCTCGGACTCCGACAGTTCTGAGGATGAAGCTCCTGCCAAGCCAGCTGGTACCACCAAGAATCCCTCAAGTAAACCAGCCGCCACTCCCAAGCAGCCTGCAGCTAAGTTAGCTGCCACTCCCAACAGTTGTTCCTCTGATGACTCCAGTGAGGAGGAGGAGGAGCCCAAGGGCAAGGGCACTCCAAGACCGCAGGCCACCAAGGCCAATGGCACCTCTGCACTGACTGCCCAGAATGGAAAAGCAGACAGGGGCAGCAACGAGGAGGAGGAGGAGAAGAAAAAGGCAGCAGTGGCGGTTGCTAAGCCAGGTTCAGAAAAGAAGAAGAAGAAGAATGAGGCTGCTAAGGAGGCAGAGACGCCTCCAGCAAAGAAGATAAAGCCTCAGACCCCCAACACATTTCCTAAAAGGAAGAAGGGAGAACGAAGGGCATCCTCCCCATTCCGAAGGATCAGGGAAGAGGAGATCGAGGTGGATGCTCGAGTGGCAGACAATTCCTTTGATGCCAAGCGGGGTGCAGCTGGAGACTGGGGGGAGCGAGCCAATCAGGTTCTGAAGTTCACCAAAGGCAAATCCTTCCGGCATGAGAAAACCAAGAAGAAGCGGGGCAGCTACCGGGGAGGCTCCATCTCTGTCCAAGTCAACTCTGTTAAGTTTGACAGCGAGTGACCATGGGCCGTCTATGGCACAGCAAGGGTGTGCCCACTCAACGTCCTCAGTGGACCTGGGAATCCTAGGCTCTATCAGGGGAGGGTCTTGGTGAAGAGAGCAGTTTAGAATAGGTCTGAAGACTGCACTGTAACACCCTCTAAGGTCCTTTTTTGTGTTCGTGGTTTTGTACAGATTTGTTTTTTGAGTGTTGGGTAGCAAGGACAAAGAGTGTTCATTTTTAAGAACAATTTTAGTTGTCATTCCCTCCATGTTCTGTGAAAGTCTTCATACTGAGAAATTTGTATATTTCCTATTAAATCATTTCTTATTGATTTTTGTTGTGGTTTTCAGAGGTGGGTTCCCACAGATTAAAATCTTAGCTATCTCCCAAGACTTGGTAAAGGTCACATGTAAGAATTTTTATAATTGGAGAACTCTGCCTATGTGAGTGCTGGTGTCCACTTTTCATCCTTCCTACCCATCAGAGCCCTGATGAGGGGCAGTTAACATTAACCATTGTTAATGTATATATCTGTTAAGCATGAACTGTGTACCTCATTTATGGGGTCTAGGACTGAAATCTTCAGCCAGCATGGACTTACCTACTTTGGAGGATAAAAGTCATTGTTTTATTCAGACAAAATTCTAATGTGTGAATGCCCTGGGGTCAGTCTGCATATTTTTTGTATTTTTATTATCACATAATGTTTGCAATATATGTTTATTAATTTAAAAGCATAAACTTTTTTATTGTTCAAAGATAATTTTTGATTGGCTTCTGAGGACTATATCTTCTCAGTTTTTTTACATTTTAAAGCGCAAAATTTAATCTGAAAAGCACATATCACTTGGTATTTCTGTCTTGGTAGTGTGGTGACACAAAATAGTTTGATTAACTTGTTACATGTTTGGGAGTCACTGATCAAGAAAGTGAAGGAAGAAATCTATAATGAAAAACCTCAGTAGGAATTAGGTTACATTAGTCAGGTGAATTTATAGGTAACCTACGTATACACTAATAGAAGAACCTTTACAAAGCATTTTATCTGGTATTACTTGAGTTAGAGTGGGGTTGGGAGAGCATTCTAACAGGGTTATTGTGTCTTGTAGTTGGTACATGGGAGAAACTCATATGCTCCCTTTAGAACCTTACTGTCAGTAAACAATAAAAAGCCTGTGAGCAGAGATATGGCTCTTGGGGCATGCAGGCTGATTGTAGAACTGTAGGAGATTAACGTTGGCAGTGCTCACAGAGCAAGTGAGGAGGAAAGTTGAGTTCTCCAGTCTCTCCCAAGTTCTCTGGTGCTGGGCTGTCCCTGTGTTGGGAATGCGTGCCCTAACTTTATAGATGAGGTGTAAATTTACTGTCCATGGGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCGAACCCGGGTCTCCTACATTTCAGACAAACGCTTTACTGTCTGAGCCACCAGGGAAGCCCTAAGTTAAGGTTAGCCTCCCCTTGTTTGGGTTACAAGTAACCTGATAACCTGGTTTTCTGTGTAACTGCCGCTAGGAAGAAAGTATGCTGACATACGTATAAAGTCTGCATGGTGAAAGTTCTACATCTTAACTACAAAATAATAAACTGAATGGTTTATATGTGTTTTGGGAGTTTTACTAGTGTGAATCCAAAGCCCTCCTACCTCCTACTCAGAACAACTTGGGTGCCAGTTCGAGGGCTAGGGTTCAGACCTCTGGAGGCTCACTGTGGACTCTACCTTCCTGACTGTACCTTGTGTCATGGTATCTTGTTCAGGCTGTAAGTCCAGCCTTTGGGTGGTCTAAAACTGGTGGTTGGCAAAATGGGCCATGGACTGGATCCAGTTGACCAGGAGCTAAGAATGGCTTTTACATTTTTTAAAGGGCTCAAAAAAACAAGTGACAGACTATGTGATCACAAAGGATATAATGTTTCCTGTCATGTTTTACAGTTTGCTTAAGCCCTGGCTAAATCAGTAATTTCACAACACTGGCTGAAAGTTAGGACTATCTGGGGATCTTTTGAAAACACCGATGCCCTGGGACCCATCTGCTGACCAATTGAGTCAGATCCTAGTGCTCTCTGGTGGATTCTGGGAGTTTGGATTTTTTTTAAGCTCCCAGGCAGGTGATGCTGAAGAGACCTGAAAACCACTGATCTAAAGACTATTTGAAAAGAAACGAGTGGGTAATTTTTCTTCCTTTTATGCTTTTATTTTCAAATGTACTTACTAGATCTAGTAGTATAAGGTAAAAATTTAAATTTCCATTTTATCCATGTTTTCTAGGACTTGTTTCTTTTCTCTTTCCAGAATTTCTCTATGCATATCCTCTCCCGTTTCTCCTCACACATGGAGAAGCTCGCTATATGCGGTGTCTCATAACTTTAGAGCTCATTTTTAATGGCTGCATGGTACCCCATTGTATGGAAATAGCTCAGATTATTTTAGCTAGTATCTTATTGGTAGCTGTTTGGGTTGTTTTTGTATTTTGTTATTCTAAATAGTGCTGCAGTGGATATTTTATACATGAGACAATTGTATGTGAGTATTTGTGTGGGTATTTTTATAGGAAGTATTCCTAAGAGTGTTGGGTCAAAGGTTATGTACTTTTAGTTTATTCATCACTATCCTCCAAAACCACTGTAACAACTTGTAGTTCCAACAACACTTAAAGTACCTTTTAGCTTACCCTCTTGCCAACACTTAACCAAATTGACTTTTGCCACTTGGATAAATGACCATGCTCAGTTTTTTTAAATTGTGGTAAAAAACATTTAAATTGCCATCTTAATCAGTTTTAAGTGTATGGTTCAGTAGTGTTAAGTATATTAACATGTAGTACAACAGATTGCTATGATTTTGACCAGATAGTTCATATGAGTACAAGCAGACTTTATTTGTCCTTTTCCAC EMBV3_27615 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15127 TGTACGATGGCCAGCTGGGGAGAATTACAGCACTGGGCTACAAGAAACAATTAGGAAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11566 CAAGATAAGGGTTCTCCCTGAATGTCCCTCTCCCTGAACTTGCCTGTTTAGCTGGCAGTG Gene GeneID:507058|PI16:NM_001024487:14_cdna Constitutive 0 NULL GeneID:507058 23 GENE PI16 MGC139962 peptidase inhibitor 16 EMBV3_34834 CCGGTTGGAGCCCCCAGAGCATAGGAAGAAGTACACGCTGCTATGTGGGAGTCCCCCCTT Variant GeneID:504282|PLK3:NM_001075153:53_cdna 745^840 1 EMBV3_41869 GeneID:504282 3 GENE PLK3 MGC142543 polo-like kinase 3 (Drosophila) EMBV3_22169 GTGTGATGACACGGGCTCCCATTACCAGCTCTGGTCTGTTCTCAGTGAGAGTACAGCTTA Gene BVT0102_102336 + 0 NULL GK000021.2:17728972-19222945 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164170 TCONS_00121789 TCONS_00118496 TCONS_00121790 TCONS_00054131 TCONS_00121786 TCONS_00164169 TCONS_00054163 TCONS_00121788 TCONS_00122172 TCONS_00122897 TCONS_00164171 TCONS_00138409 TCONS_00164166 TCONS_00121787 TCONS_00121784 TCONS_00122202 TCONS_00121791 TCONS_00121785 TCONS_00164165 TCONS_00054179 10 XLOC_100142 XLOC_073484 XLOC_072644 XLOC_031940 XLOC_031972 XLOC_073727 XLOC_074451 XLOC_084617 XLOC_073757 XLOC_031988 Coding TCONS_00164171 XLOC_100142 Coding Coding PPFIA1 29:48147969-48154293 j TSS122900 2119 1 TCONS_00164171_1 83 6 0.6658231851969 1.12277024664493e-13 0.0022717876302034 4.70098363491757e-71 0.00311623048711267 5.07386616033699e-10 5.16629768623404e-26 0.00264204657157346 0.00238276616197476 0.00240759137620809 0.000549822900991778 0.0007643549298132 7.88623327819788e-05 1.55428954843411e-37 1.28895348782962e-19 0.00151927649792016 0.00260017153154979 0.00217488814566293 0.00352089130891644 0.00220703526111852 0.000756008291792773 0.00159900705949319 0.00144885175466209 0.00136743425893949 0.00164003014437086 0.00612743954274327 0.00387694533363742 0.00323518384712366 0.000502063618902215 0.000562919893826793 0.000472871995155788 XM_005227263.1 liprin PREDICTED: Bos taurus protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0 3378 100.00 0.883435582822086 NM_003626.3 liprin Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0 1164 83.00 0.540349221330816 TCONS_00164171_1 sp|Q13136|LIPA1_HUMAN LIPA1_HUMAN Liprin-alpha-1; 3e-36 132 89.16 0.987951807228916 0 coding 0 0 0 0 2.71361780944844 0.0587078426834341 -0.386004984949077 0.00039891274446638 GGGGCTGGGACACCCTTGTCCGAGCACAGCAGACGTGCTGGTTTGGAGCAACGACCGAGTGATCCGCTGGATCCTCTCCATTGGCCTCAAAGAATACGCGAACAACCTCGTCGAGAGCGGTGTGCACGGCGCGCTGCTGGCCTTGGACGAGACGTTTGACTTCAACGCGCTGGCCCTCTTGTTACAGATCCCCACGCAGAACACACAGGCTCGTGCTGTCTTGGAAAGAGAGTTTAACAACCTCTTGGTCATGGGAACCGACAGAAGGTTCGATGAAGATGATGATAAAAGCTTTAGGAGAGCACCTTCTTGGAGGAAAAAATTCAGGCCAAAGGATGTCCGTGGCTTAGCTGCCGGGTCCGCGGAGACGCTGCCTGCGAACTTCCGGGTCCCGTCCTCTCTGTCCTCGCCCTCCGTGCAGCCAAGGAAGGTGCAGCCGGACGGCAGCGTGGCGGGAACGCAGAGGCTGGATTCCGCCACAGTCAGGACTTACTCCTGCTGAGCTTCGGGTGTTCCCGCACTACTTCTACAGGTGATCACGCAGCGTCCAGGACTCGACAGAGACAACATTTGAACTCGATGCAATCTTTACTCTGTTCATACTTGTTATATGGACCCGAAGATATTTTATTACAGAGTTTTTAATTAGTGAAAAAATTCATGAATACCATAGAGAAAATATTTTAGAATTTAATGTTTCTTATATTTATGTAAACTTATGACTTCATTTATATAGTTACTTACTTTTTCTTGTATATCCAGGCTATAAATATCCTTTCAGATCAATTCATGTCCTGATGCCTGATTTCAGTCTTTGAAATGAATGTACTGTAATGCTTGTCTGTATAGACCCTGTGAACAAATATAGGGCTTTTGTAAATGATGCGTTTATTGTAATTATTCTTGTTTAATTTTTAAATGATAAACCATGAGAGAAGGGTTTTTACTGCGATTGTAAAATCATGACACGGTGTGCATTATCCTTCCAGAATGTAACCAAGCTCTCCAACAATCACTCTGAAATGAGCGAACTTAATTTCAACCAATTGTTGTTGTATTTTAACGACTGACCTAAACTGTACTTTTTCTAGCAAGAAATGCTTTTTCTCTGCAGCGTGAAGAGATTTTAAAGTACTGGGTGTTAAATGTGAGCTTCTAATCAAATTTGGGCTGAAAGGATGACTAGAAGAGGACTGTGAAAACCTCTTGGGTAACCCAGTCTCCGTGGACCCGGATCCCTCCTCTCCGGTGACTGGCAGAAGCCACGAGCTGGGGAAGAGAGACTGGCGGGGGTGGGGGTGGGGGGCCTGGGCACGCACAGCCCGCTGTGCCCGCCCTCCCTGCCCTCCTCCTGGGAGGCAGGGTCAAGGGCGCCTACTCTTCAAGGACCAATCGTGATGCCCTGCACCCACTGCAGACCTGGTGTGCTGGACAGGAGGGCGCCACACCCCCGACAGACAGCGTGGTGCAGCTCTGACAAAGGCCTTATTTTTATGTAAATCATCTTTTTACATCTGTTTGTAAACATGTTTAAAGAATGGACCTAGGCGTACATTTTTAGATTTTGATGACATAGCCATTTTGGATTGTATAAGTAGCAAATGTAACTTTTACTTTTTCAGCGGCACATTAAAAAAGCCAGCAAGAGAGGCGTTCAGATCATGGTGCGTTACTTATTGTGCAGCTGAGATCTCGGTAGAGAGACGGCAGGTCTCTTTCCATGTGGGTCCGCCTTTAATCACTTGTATAATTCGTTGTTACTGTTCTGTTTTTCTATTAATCTTTTGTGAACTTCCTGAATATGTAACAAAGTATGTACAGTCTACTTTTGAACTATTTTTATCACAGTATTATTTATTGCTTTCTTTCAATAAAGTACTGAAGCAAAATTTCCCACTGCCAATCAGGAGTGCTGAGGGTAAGCTGTATTCTCACTGAGAACAGACCAGAGCTGGTAATGGGAGCCCGTGTCATCACACGGGCATTCTGTTAAGAGAAATGGATGGAGAGAATGGAAAGGCCAGAAGATGGAAGCATGGGTGTCCCCAGAGGACGACCGACCGGGTGTTGATACCCCTGGCTCCGGAGACAAGAGGCTCCATCACTTCAGCATCTGCAG EMBV3_29170 CCATGTGTGCCAATAATAGCTATTGTGTGCTCTTACTATATGATGGAAACCTCGCTGGGC Gene BVT0102_093537 + 0 NULL GK000001.2:133310064-133319423 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005312 TCONS_00005308 TCONS_00005307 TCONS_00005306 TCONS_00005309 TCONS_00005305 TCONS_00005311 TCONS_00005304 TCONS_00005303 TCONS_00005310 1 XLOC_001238 Coding TCONS_00005308 XLOC_001238 Coding Coding NCK1 1:133315702-133395402 j TSS2638 5543 1 TCONS_00005308_2 377 0.0382464369475013 4 0.930501010050314 0.000680913621574547 0.000558569466891079 0.000381824444105544 0.000621564322239013 0.000505648846911698 1.75985688884936e-05 0.000331567402256932 0.000457495797183154 0.000605662686149597 4.61423649242059e-48 2.41826306025527e-24 1.11533029310856e-16 1.71582475282148e-05 7.63628613385152e-05 2.91935074911192e-12 0.00036324675564301 7.85637421879648e-74 5.94252739900814e-52 0.000360055741050715 0.00039983003841467 0.000165565579665712 3.55514880317789e-83 7.89026167527069e-34 4.37127890839187e-30 0.000943390091807784 0.000772643128247451 0.000549925444662335 5.08923581091777e-26 5.79347475189763e-12 1.1177863012585e-05 XM_005201880.1 NCK1 PREDICTED: Bos taurus NCK adaptor protein 1 (NCK1), transcript 0.0 9997 100.00 0.99981959227855 XM_005247498.1 NCK1 PREDICTED: Homo sapiens NCK adaptor protein 1 (NCK1), transcript 0.0 2540 85.39 0.399783510734259 TCONS_00005308_2 sp|P16333|NCK1_HUMAN NCK1_HUMAN Cytoplasmic protein NCK1; 0.0 780 98.94 0.997347480106101 5 coding 1 0 1 1 -1.41252075461857 0.0152190516911271 -0.0143572747677672 0.832150250665081 GTGCGGCGTAGTCCTACCACCTTCCTGTCCCTCTCTGGAGCGTCGGGTCCGGGTGACCGCTGCGGCCGGCCGCCCCCGGAGACTGGGAGGTCGAGTGTGTGGCGTGCACCCTTCTCCTTTCTTTTCCTCTCTAAAAGTCCTGACGGCTTTGTGGCGCATTCCGAGGCCGCGGAGCGCAGAAGGTGCTGAAAAATGGCAGAAGAGGTGGTGGTGGTAGCCAAGTTTGATTATGTGGCCCAGCAAGAGCAAGAGCTGAACATCAAGAAGAATGAGAGACTGTGGCTTCTGGATGACTCAAAGTCCTGGTGGCGAGTTCGAAATTCCATGAATAAAACGGGTTTTGTGCCTTCTAACTATGTGGAAAGGAAAAACAGTGCTCGGAAAGCATCTATCGTAAAAAACCTAAAAGATACCTTAGGCATTGGAAAAGTGAAAAGAAAACCTAGTGTGCCAGATTCTGCATCTCCTGCTGATGATAGCTTTGTTGACCCAGGGGAACGTCTCTATGACCTCAACATGCCTGCTTATGTAAAATTTAACTATATGGCAGAGAGAGAGGATGAATTATCATTGATAAAAGGGACGAAGGTGATCGTTATGGAGAAATGCAGTGATGGGTGGTGGCGGGGTAGCTACAATGGACAAGTTGGATGGTTCCCTTCAAACTATGTGACTGAGGAAGGCGACAGTCCTTTGGGTGACCATGTGGGTTCTTTGTCAGAGAAGTTAGCAGCAGTCGTCAATAACCTAAATACTGGGCAAGTGTTACATGTGGTTCAGGCTCTTTACCCATTCAGCTCGTCCAATGATGAAGAACTTAATTTTGAGAAAGGAGATATAATGGATGTTATTGAAAAACCTGAAAATGATCCTGAGTGGTGGAAATGCAGGAAGATCAATGGAATGGTTGGTCTGGTGCCAAAAAACTATGTTACCATTATGCAGAATAACCCATTAACATCAGGTTTGGAACCATCGCCTCCACAGTGTGATTACATTAGGCCTTCACTTACTGGAAAGTTTGCTGGCAATCCGTGGTATTATGGGAAAGTCACCAGGCACCAAGCAGAAATGGCATTAAATGAAAGAGGGCATGAAGGTGATTTCCTCATTCGTGATAGTGAATCTTCGCCAAATGATTTCTCAGTATCACTAAAAGCACAAGGGAAAAACAAGCATTTTAAAGTACAACTAAAAGAGACTGTCTACTGCATTGGGCAGCGTAAATTCAGTACCATGGAAGAACTTGTAGAACATTACAAAAAGGCACCAATTTTTACAAGTGAACAAGGAGAAAAATTATATCTTATCAAGCATTTATCATGATACTGCTGACCGAAGCGAACTGCTGTACAGTTGTAATTCGTCATGTAATTGAAGACTGAGAAAATGTCAGTCCAGTCATGCTTGACTGGAAATTGCTGTTTCTAACTCTATACGAGAATTGACTATAATACATAAAATATTTTTATTATAATTCAGCCCATATATATATATATATACTACATACAGCAAGTATCTGCATAGAGCAGTTCCTTGTCCTTGGTCTGTTTTATTGTTTTCTTTGCTCTTCTCTTGCTTCTAATATTAAGGTTTTATATTTTGAAAAAATGATGCAAATCAAAAGTCTTTATATGAAAGAATGTCTTTATCGCCTTTCCTTTATTTTCTTGTAAGGGCACCACCTTAGTTACTTCTGCAGTGGTTTCTATTCATGTAAAATTATTATATCTATTATATCAACATACCATATGCTAAAATAAATTTCTTGGAGAGTTAATCTTTTCTGTGACTAAATAGCAATAATAAATGGAAAATTAGACATTATTTTCAGCTATTATATTTGTCACAAACCATTGTAAATACCAAATATGTTGTGTCTGTCATTTTTCAGAATTCATTTGTTTTCAGTTTAAAGCAAACCATATGGGACATAGGTTAGAAAATATATATCTTGTACAATTTAAATTTACAGCTGTTGGAAACAAAAATCTCCAAATTCCTATGAATTTTTTCCCCCACTTCTCTCTGGTTATTCAAGAGAAAAAAGCATTCTCAAGATATTTAGCTTTTAACTGTAAATGGATGCTATAGTGTTACTTTTTCCCCCTAATGTTATTTTACCAAAGCGTCTAGTTTTTGAGTATGTTATATCTTGTCACTGTGAAAAAAAGCTGTGGCCAAATTTTGAAGAAGTAGGTGACAATGAGATACTTCGTTCTCTCCCTACCAACCCTCCCCCCCCAAAAATCAGTAATAATCAGGCAAAGTAGTTGTAGTATTTTTATTTTCTTCATTCAGCTTTGAGTTTATTGACCAGGACACTAAAATTGATATGTATTTGAGGAAAAGATGTGATGTGCTAATGCTTTGAGAAAATTTAAGACACAAAATTACTGATTCTAAAATCGAAGTTGTCTAATTCATGAAATTCTTGATTTTGGTGGTTTTAGATTTATTTTGTTTTTTAATTCTCTAAATCTTCACATCATTTAAAGACTTAGATTGCCACTGGGTGGCAGCCCTGACTTCTCCCTCTACGCATCAGGAGTTAGCAAATATAAACATTTTATTACAGTTTTTAAAATCTTTATTACATCTGCTTATAAAGCCTTTTAGTTTGTATTTCATTATCTTTCTCAGCCCCACTTTATTTATTAAGATAATTATGAGTAGGCAAGTTTAGTGGAAACAAAAGTCACATTCTTACCTTTTTTGGCTGTAAAATCACTTGAATATAAATTGAGGAAAATAGTTTTAAAGTAGTTGTAAAATGACTTTTTAATTTTAAACAAACATCTGATGCTTTCTTTTTATTCTCTACCTCTTTGTGGATTCCCCTCCATCCAGTCTTCCTTACTTAAAAAATGGATGTTTGTTTAAAAAAAGAAAGGACAGCGATGGGTTCAATTACTACTTTGTATCACACACATGAGCTATTTATAGCAAACCCTGCTGAGCTGATGTCAAGCATTTTGAAAAAGGAATGGAGCAGCACTGGAAACAGAATGCATATTTCTGTGCTATAATTAGATTTATAATAACTAGAGAATTTGTAGGAGATCCATGTGTGCCAATAATAGCTATTGTGTGCTCTTACTATATGATGGAAACCTCGCTGGGCACTACTTAACTTTGTAGTTCAACATTTTATCAATTTTTTTAAAGTCTTAAAACCAATGTTTACATCAATGACTTTTTTTTAAAAGTATGAATTTTCTTAAGAACTGGAACCATTTTTAAAAACATCTACATAGCTAGCTAGTAGCAGGACTCGTGTTAGAAAGCACTTTTCCTCATTCCTAGCCTGTACACTTGCCTTGTGACACATTGGCCTCATTGTGCCTGTTTTTAGACTAGTAGGAAAGTCCTGGAAAGAGCAATATTACAGAAATTTTCTTTCATCTGTGAGGAGATGCTTAGCTTTCAATTTAAATATTCATAACACACGTAACTGCCCCATAGCCCACTTCTACAAATAACTTCAAATTCTTGGAAGAAGGATTTCGAACTTTATATAAGCTCAGTGACAGAAAGCTATTGTTGCTGTATCTGTTATTTAGTCAGAAGTCCTTAAGTTCAGCTGAATACATATTCACACATATTACACGCCTTTGACTATACACAGTAACACCTGGCACTTTTAAAGATGGTGTGTCACAGATAAAGCACTTAACAAAATCAGAAGGCTTTAGTGCAATCCATTGTAATTGCTGTAAGAATAGAATGCCTAGCTTTGGTTGGTGGAATGATGTCCTCATGGATATGTGGATAGATAAGTTGTCTCCAGCTTTAATGCTTTAATTTTGTCATCTAATCTAGAGATTGCAAGAAGCAGGGCCACTACAGTCTGTGTAGATACATTTGTGAGAATTGCAAAAAGGCACATCTTCCCCTGGCAAGACAGCCACTTTTTTGCTGTTACAAAGTCCAAAACTCACAATCACCACCCTTCCCCCATCTTGCAAGATAACCCATTTCAGGATACAACCAAAGAGGAATACAGTTCAACCTACAATGCTTAAAAAAATAATTGTTAACATTTTTTAATGGGGTGGGGAGGGGTTTACATAAACAGAGTTTTGGTTTCCCCTGAAAAATGAGAAGCTGGTAACACTGGATTTGAATTCTCACAAGGCATTGGATAGTACGGATGCACCCCATATTTTTACCAATACATTAAAGATAAACAGCGTAAAACAGTGTTTCCCAACCTTTATCCTGCTAGTTCAAATCTCAAAATGCAGTTACTCCCTGTTTTTCCTGTAACTTGGAGTTTTAGGTTTGGAATCTGAAAACTTAGCATTTTGCAGAAACATTTCAGTTGCGATGTCCAAATTAATTAGGAATAAATATTACAGCATGCCTTAACTTTTCCACTTTAGTATTTTGCTAGAAGAAAAGGAGATCCTTTGTAGTCTTATCTAGATTCTTTAAATGTTTTTGAATGGTTTCACAATTGAAGTCACTTCTAACATAAAGCAAATTTGATACAGCACAAATGACATCCTCATTTTATGTTTTGAACAGCATCCAATGGACTCTTTGAAAATGCCATATTACTGCTTCTTGGGAAAATCCGTGTTTTTTTCTATCGCAAGGCAAAGTAGGAAAGCTCCTTCTGAAAAACTGGTTCTACTGGCTTTTAACAAGTTTATATGACTTAACTCTCATCTTCTAAACTCTTAACAGACCAGCACACTATGCATACTCCACACCCTAGTTTCTTGCTGTTAAATGACCTAAAACCAGTGACCAAAGAACTGAAATACATTTTTCTTGTTTACTGTGAGGGGTTCTTTTGATTTAGAAGTACTAATAAATATAGTTTGCTGAGACTTTAACGAGAACATAAATTGGACTTAGTAAGGTTTTGGAGAGCAAGAGTTTTTGTTACCACTGGCCCTGTTCACAGAGATAAACCACCATGTCTTTTAGAGTATGTTTGTTGGTTTGAGCACTTATATTATCTTGGATACTTCAGAACTGGCCTGATGCCTACAAAGGATTCACACATTTAGTTTACCTAGCAGATTTTTTAAACGTTCCTCTCAAGTTACTTTTTAAGCTGCTTTTAAATCTCCAGGGAAAGCTGGTCTCTGTATTTTGAAATAATGTTGCAAATTTTATTTGTAGTTACAGAAGACAAAAAGTACTCAATTTCCTCTCTCCCATGTATTACTGTGACTTTTGAACAGGAAAACAAACTTACAAGTAGACAAGAATAGACATCTCAAGTAGTTTAGATATTGCTTTAAATAGATCTCTGGACTCAGAAAATATATTAAACTCTGTAGAACATTTGAAGATAGCTTTTGGGAAATTATGGAGACAGGTATATTCCAGAATGAGACTACAGAGTCTGTTAAATACTGGAATGGTTATAATTGATGTTTTTTGAGCATCTGTAGAAAAAATTAGTGATCCCCGAATAAATGTCTTTTCTTGGAACAAGTAATGCAAACAGACTTTCACTTGTTTTGATATGTTTTAGACTATAGATAAGGGGGATGGTGTAGAAGACAATTTCATCAGGGCATATG EMBV3_03995 GCTGTGACTGCCCACCAACCCACGACAAAGCCCGCATGAAGAAAATATCCCAGGTTTCTT Gene GeneID:100300042|LOC100300042:XM_002700232:215_cdna Constitutive 0 NULL GeneID:100300042 X GENE LOC100300042 NULL hypothetical protein LOC100300042 EMBV3_06474 TCTCACACCTGGGGAGGAGGGGGATGTTTGTGGTTTCCTCTCCCAGTCTGGAATGGGCAA Gene GeneID:509002|SHMT1:NM_001015553:496_cdna Constitutive 0 NULL GeneID:509002 19 GENE SHMT1 MGC137164 serine hydroxymethyltransferase 1 (soluble) EMBV3_07112 AACCAGCCTTTGTGCTGAGGCAGACCACTTTTCTAACACGGAGATGTCCGTGGTTCCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19961 AACAAGCCTGGCGTCTACACCCGCGTGGCCAACTATGTGGATTGGATCAACGACCGGATT Gene GeneID:100337361|LOC100337361:XM_002688419:37_cdna Constitutive 0 NULL GeneID:100337361 6 GENE LOC100337361 NULL HGF activator preproprotein-like EMBV3_25234 CCCGCTGTGGCTTCTCCATCAACGTGCGAGGTTGACAGGCGCTGCTCTCGATGTGGGCAC Variant GeneID:535288|ZNRD1:NM_001046400:165_cdna 237^337 2 EMBV3_00511 GeneID:535288 23 GENE ZNRD1 MGC140339 zinc ribbon domain containing 1 EMBV3_29821 CAGCGCCTGCTGTTCTAGCTCCTCAGATCTCGTTTAGCTCTTGAGAGATGACTGTGAGAA Gene GeneID:507459|C20orf54:NM_001014864:922_cdna Constitutive 0 NULL GeneID:507459 13 GENE C20orf54 NULL chromosome 20 (human) open reading frame 54 EMBV3_03815 TGAGAGCTTTCCTGTCTGAACCCATCGGAGAAAAGGATGTTGCCTGGGTGGACGGGATCA Gene GeneID:538599|BANF2:NM_001040559:73_cdna Constitutive 0 NULL GeneID:538599 13 GENE BANF2 BAF-L MGC133538 barrier to autointegration factor 2 EMBV3_19731 GGCCAGGCCCCGGCCGGGGCAGGAGCGCAGAACCTCTGTTATGCACCTTAAGCCATACTG Variant GeneID:539922|FBXO34:NM_001081611:104_cdna 152^236 1 EMBV3_40037 GeneID:539922 10 GENE FBXO34 NULL F-box protein 34 EMBV3_02936 TGACTCAGAGGATTGGTGAAGGAAGAGAGGCCAGCTGAGAGGCTAACGAATAGATTGGGG Gene BVT0102_122833 + 1 EMBV3_39210 GK000023.2:12410667-12483467 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134111 1 XLOC_081297 Coding TCONS_00134111 XLOC_081297 NonCoding Coding BTBD9 23:12457860-12462083 j TSS100037 492 0.0833333333333333 3 0.884178114637613 0.000349611135479416 2.14602885839957e-05 0 1.75224342757062e-05 0.000725206183038721 0 0 0 0.000257044550858179 0.000212195994833988 6.29713062485498e-215 0 1.2677946639607e-05 0 0.00169071995287212 0 0.000168722309070132 0 0 0 0 0 0 0 3.13715833639786e-05 0.000428364428809912 0 0 0 0 XM_003583853.2 LOC100852241 PREDICTED: Bos taurus formin-like protein 5-like (LOC100852241), 1e-28 131 100.00 0.144308943089431 XM_005248841.1 BTBD9 PREDICTED: Homo sapiens BTB (POZ) domain containing 9 (BTBD9), 2e-07 60.8 83.08 0.128048780487805 0 noncoding 0 0 0 0 0.0225912375307617 0.879430386153916 0.0225912375307617 0.879430386153916 TACGAGGAGGGTGCGGAGCGGGCGGAAGAGGCGCCCGTGCGGGCCGTGAGGTCGCAGAGGAGCATCGTGGGGTTACAGCTGCAGAGATAGTGGAAGAAGATAATCCTACCCAGAAAAGTTGAGAATGAGAACTGGAAAGAACATGGAGTGGAACTTCTGGATGGTTTCTCAAACTTGAGCATTCATCAGAAATACCTGGAGGCTTTGGACTGCACTTTGAGAACCACTGACTCAGAGGATTGGTGAAGGAAGAGAGGCCAGCTGAGAGGCTAACGAATAGATTGAGGTTGATGGAGAATTCAGAGAAAGTTTAGAGCAAAATAAGGAAGTAAGAGCCTGGAGAACCACCATTCTGCTTTCCAGTTCCATGAACTTCAACTCATTCTTATTTCTGTTTCATCCAGAATTTGGTATAATGCTTGGCACATAACATTGTTTGAACGAACCTTTGAAGCTTCTTAACAATGTCCTTATGGGTGATTGCAAGTACTA EMBV3_13518 GAACTACTTCATAACTTGTCGAGAAAAGCGGTCTGCTGCAAGGGCATGTGGTGTGCACCT Gene GeneID:539052|EIF3J:NM_001076143:126_cdna Constitutive 0 NULL GeneID:539052 10 GENE EIF3J MGC140057 eukaryotic translation initiation factor 3, subunit J EMBV3_40384 GAGAATTCCTTCCTGAAGCCAAATTTCAAGGTCCCTGGAGCAAGCACCAGCCTCTTCTCA Gene GeneID:100296139|LOC100296139:XM_002696787:501_cdna Constitutive 0 NULL GeneID:100296139 21 GENE LOC100296139 NULL hypothetical protein LOC100296139 EMBV3_39374 GACCGATTTGCTGCCATCTGCCATCCTCTGAGCTACCCAGTGACTATGAACAAAAGGGTT Gene GeneID:782766|LOC782766:XM_002693110:510_cdna Constitutive 0 NULL GeneID:782766 15 GENE LOC782766 NULL similar to Olfactory receptor 10A3 (Olfactory receptor OR11-97) (HTPCRX12) EMBV3_02070 GCGGCCGACTTGGACCTTCAAACCCCAAAAGGTCGTTCTGGGGTTGGAGTTTTCCCCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12981 TGTTCACTTCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCACGGATG Gene GeneID:100296552|LOC100296552:XM_002692210:1416_cdna Constitutive 0 NULL GeneID:100296552 13 GENE LOC100296552 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_40301 GGACAAATATCGTCATTGTGGTGATTTCCTAGGGGTGCCGCGACAAAGTATCCCAAACCG Gene BVV0102_025577 + 0 NULL GK000008.2:110605778-110997544 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38372 TAAAGGGAACAAAGACTACGAGTCCCATAATGCCTTGCGCGTTAAGCCTCTTTGGGCGCC Gene BVV0102_020228 - 1 EMBV3_06606 GK000016.2:31137375-31177714 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31270 CTTCTGGATTTTACATGATGTGGCTTCAGCTGCCTCCCTGACATCACCTCTTTCTGCTCT Gene BVT0102_180558 + 0 NULL GK000003.2:84127018-84491512 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07689 CGTGGTAGAGTCTCCAGGACAGACCACGTGTTAGGCCACAAATTAAGTCTCAATAGATAC Gene BVV0102_151651 + 0 NULL GK000001.2:144604739-144656766 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37419 TCATCGTGGTCGAGTACTGTTCCGGCCTTCGGATACAACAAATTCTTCAAACCAAGATGC Gene GeneID:617557|MMGT1:NM_001079630:33_cdna Constitutive 2 NULL GeneID:617557 X GENE MMGT1 TMEM32 membrane magnesium transporter 1 EMBV3_32093 GCAAGAGAAGGAATACAGCGACTGCGCCTGGGAAATCGTCAGACTAGAAATCATGAGATC Gene GeneID:100298573|LOC100298573:XM_002689521:150_cdna Constitutive 0 NULL GeneID:100298573 8 GENE LOC100298573 NULL similar to interferon, omega 1 EMBV3_38541 AACGTGCAGGTGGAGGTGATCACCATGGAGTTTGCAGATGGCGTCATCTTACTCTTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26436 TGTTTCAAGACACAGATTTGCGTTCGTTCCACGGTCTGCCCCACAGAGAACCGATGCTGC Gene GeneID:782752|GTF3C2:NM_001102329:264_cdna UTR3_Alt 2 NULL GeneID:782752 11 GENE GTF3C2 MGC155253 general transcription factor IIIC, polypeptide 2, beta 110kDa EMBV3_09423 GGACCGGGAAGCAATACTCTTGTTAGCCTTCCTCTTTTGTACTCGGACACACAGACGTCA Gene BVT0102_012116 + 0 NULL GK000029.2:51051847-51057468 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15296 GGGAATACCAAAGAAGTTATAAACAAGATAAATGCTGTGGCTCCTACTTGGGGCTTTGAC Gene GeneID:538436|CCNE2:NM_001015665:64_cdna Constitutive 0 NULL GeneID:538436 14 GENE CCNE2 NULL cyclin E2 EMBV3_08994 ATCCACCTGAAACACAGAGAAAACCATGTATCATGTCTCTCCAGCTCCACTGTAAGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21937 CATAGGCCCTAAATCCAGTGATGAGCATCCTTAGAAGGTCCACAGAGACGAGAAGAGGAG Gene BVT0102_161306 - 1 EMBV3_31026 GK000018.2:24135545-24163232 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085763 TCONS_00085762 TCONS_00085765 TCONS_00085760 TCONS_00085761 TCONS_00085764 1 XLOC_051958 NonCoding TCONS_00085762 XLOC_051958 NonCoding NonCoding - 18:24135811-24138996 - TSS63963 1217 2 TCONS_00085762_2 67 0.195562859490551 2 0.618404522613065 0.000316057024269365 0.000947461422470133 0.000344493244626074 0.000502862249780291 4.09519749102973e-54 2.40551719673782e-09 1.82491841555987e-62 0.000146388557359774 0.00074387279685188 5.70124694036245e-110 1.88100868601324e-06 3.93554992254158e-42 2.76525271056232e-06 0 4.81133631099279e-31 0 0 0 9.90052220702421e-05 0.000128556106431806 0.000334400220445742 0 0 1.37753872616449e-05 0.00480131622533597 0.000196286236482072 0.0016905339777845 0 0 0.000143265920208603 XR_240477.1 LOC101903245 PREDICTED: Bos taurus uncharacterized LOC101903245 (LOC101903245), 3e-09 68.0 74.53 0.0862777321281841 NR_040064.1 LINC00862 Homo sapiens long intergenic non-protein coding RNA 862 (LINC00862), non-coding RNA. 3e-21 107 81.74 0.0912078882497946 0 noncoding 1 0 1 0 -1.75733448652366 0.0756641693139699 0.0284913299496393 0.569223354344738 GTGCTCGAGGTGGTGGAATTGAAAGTGCCTGAAGCCACTGTTGCGAAGCCACCTGGGCTTCACGTTAAATACCTTGGGGTTGTTGTTGTTTGGTCACTAAATCATGTCCAGATAGGAGATGATAGTGTCTCCTCTTTGGACTTTTTTTCTTCCTTCTTTTTCCTCTTCCTTCAACTTTATCGAAACTGAAGACTCATGAGCCAACACGTGCAAAGCCTGGAGAAAGCTTAGCTCGCTCCTTGTCTGAGGCCATTTGGAGGCCCCCTGGAAGCCAATATTTTTGAGGGTGCAGAGTTTCCAACCAACATTTTCAAGTGCTTGTCCAGCTCTGATTTAGAAGAGGCTCAGCTTTGCCAGAGGGGAGCGGAGTAGGGCCTGGTCTGTCCTGGCGAGTCTCAGTCACTCCATCTTCCTGGGAAGCAGCCTCAGGACCACCTCCAAAGGGGGAGGGCTGCAAATCCTCCACAGGGATTAAGTGTCCTGACTTGCTGAGTGAGGACACAGTCTTATAACAAAAGACATGAACTGTTCTGTGTCCAGCTTCTGCGGCTGCTGGCCCCATCACTCCAGTCTCTGCTCCCATGGTCACATCGTCCCCTCCTCTTCTCGTCTCTGTGGACCTTCTAAGGATGCTCATCACTGGATTTAGGGCCTATGTGGATAATCCAGGATGATCTCATCTCAAGATTCTTAATTTAATTACATCTGCAAAGCCCTCCTTTCCAAATAAAGTAATAACCACAGATTCTAGGATTTGACATTGATATCTCTTGAGCGGCCAGTTTTCAGCCAACCACAGGCTCAAGGGACTCAGAAACTCAGCAGGAGGAACAGATAAAAGGAGAGAGGCTTCCCTCTGAAGCTGAGATGCAGCCACCTAGCATCACCACCCCTCCCCCCCAAAACTGCCGCTGGTCACCCCAGTCCTGCACTGCAGGGCTCCCAGAGCAGGTCCTTCCCGAGACAGTTTGTGAGGGCCCTTGGGTGGGGGCGGGGTGTGTTCTCTCCCCATCAGACACGCAGTCCTGGAGCAGCGGAATGGCTCAGCGCACGCTGGGAATCCCAGAATAAGGGATGACGGCGGTGGAGAGAAAGAGAAGCAGGAAAGGGCTGGGAAATAAGAGAGCCTTTGCTCTCCCTCCGCCTTCAGAGGCGGGAAGTGTGCACTTTCTGCGGGGAGGCGGCTGCAGCGGTGGACAAGGGCGGACAGGCGGGCG TCONS_00085759 s 5' 268 TCONS_00082607 r 5' 0 EMBV3_14788 TGCCCACCTGCTTTGTTGTGTACCATCTCCAGTCTTTCTACAAGCAGGCAGGATGCATCT Gene GeneID:281299|MC2R:NM_174109:17_cdna Constitutive 1 NULL GeneID:281299 24 GENE MC2R NULL melanocortin 2 receptor (adrenocorticotropic hormone) EMBV3_11120 AGTCCTGGAAATCATCAAGCAAGGGGTTGTCGCGCTGCCCAAGGACAGGCTGAAGAAATT Gene GeneID:613923|DYM:XM_002697764:301_cdna Constitutive 1 NULL GeneID:613923 24 GENE DYM NULL dymeclin EMBV3_40986 AACAACGCTGTGGATGAAAATGGTGCCAAGATGATCATCGAGCCCACCAGCCCCTGCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25859 GCGCATCATTGGGTGGATTATTGCAGGCATCTTAAGCCTTATCTCCATTGTGACTGTAGG Gene BVT0102_030617 - 1 EMBV3_03992 GK000005.2:100971898-101036858 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196072 TCONS_00118507 TCONS_00120355 TCONS_00243278 TCONS_00120354 TCONS_00245635 TCONS_00204799 TCONS_00120356 TCONS_00070482 TCONS_00118495 TCONS_00160943 TCONS_00196073 8 XLOC_118225 XLOC_072646 XLOC_073146 XLOC_149941 XLOC_150781 XLOC_124526 XLOC_042260 XLOC_097836 Coding TCONS_00243278 XLOC_149941 Coding Coding TCTE3 9:105115349-105121705 i TSS182956 6356 1 TCONS_00243278_14 326 0.999685336689742 1 0 1.65896902131963e-05 3.83903161182665e-05 2.45951195756381e-05 3.50579155711653e-05 7.69727579247554e-05 9.82851188964414e-05 9.71427382545727e-05 5.85425960864709e-05 0.000934273919884255 0.000326430442389895 0.000393745298063309 0.000445142852921098 2.69126770481108e-05 0.000954285337021334 8.96675797173394e-05 0.0044184224932959 0.000218509302277616 0.000167904319545412 2.06839829088799e-07 0 0 0.000452758306388852 0.000652976329044989 0.00302186855814171 0 3.44859077520306e-07 3.68731602265334e-07 0.000151623899122533 0.000126391997712565 0.000238610302423682 XR_139747.2 LOC100847211 PREDICTED: Bos taurus uncharacterized LOC100847211 (LOC100847211), 0.0 2531 91.32 0.270295783511643 TCONS_00243278_14 sp|P61570|ENK17_HUMAN ENK17_HUMAN HERV-K_11q22.1 provirus ancestral Env polyprotein; 6e-49 176 34.30 0.825153374233129 0 coding 1 1 1 1 0.0477429040614153 0.763374109579753 0.0329907657141209 0.651972403457476 TTCAAGAGATCAGTTGAACTACTGCTATCATATTTTACTGGAACAATTCATGGTTCCCAGAAGAGGGGACACTCAATCTAGACATATAGAAAAGGGTTAAAAATAATATTTTGGAAGCATATCAGCAAGGGTTACATGGTCACTCATACGGGCTATCATAGAACAAATTGAAGGGCATAATGTTGATTTGTAAGTAAAAACTATTCGATCTTTACATGAATATGAGCTTAAGGAACAAGATATGCAAGGTGCTTTGAAATATAAGAATGTTATGCTCAATCAGACACAATCCTTAGAAAAACAACTTAGAGACATATATATACAGGACATGTCAAAACTGAAGCCACTTAGAATGGAAGTCATTTCATTCAATGGACAGCCCAAATCTGAGGTTTTTCCTTCTGCTCTGCCTGTAACAGCAATTGCTAACTTTGCTCATACTAATCATTTCACTCCTCCTCGGGAGATGTCTGCTTGCACTTTCGCTTTCCCAATTCAATTTAATCAACCTGCCCAAGGCCAAAATACTTGGGCTAATCTAGATTTGGGCATGTTGTCTAGCTTTAAGAAAGCATGAACTCTGTATGGACCTACTTCTCCATACTGTATAGAATTTCTTGGAGGATGGGCTGGCCATTGGATGCCATATGATTTTTTTTTTCAAATAGCAAAGATGATTTTAAATCCTCAACAATTACTGCAATGGCAAATATGGATTAATGATGAGGCCCAACAGCTGATGATTGACCAGCAATCTCATGGTAACCCTGCCAGTTTAACCTATGATATGCTCACTGGAACAAGAGCCATGGCTGATATGATTGTGCAATTAGCTAATATTACCCCTCAGATGTTACATTTCATTAAAGAAACTGCCTGCAGGGCATAAGCAAAGGTTGATAGCCCCAACTCTGATGGTTCATTTGTTAAGATTATTCAAGGACATGAAGAGGAATATTCTCAATTTATAGGAAAATTAAAGGATGCAATTGAGAAATCTATTAAGGATGTGACTTTACAAAATATTATTTTAAAAAAACTTGCTTTTGAAAATGCTAATGAGGAATGTTGATCCGTGCTCAGACCAATTCGAGAGACTGGCTCTTTTATGGAATATTTGAAAGCATGTAGGGACATCGGATCTATGTCCCATAGAGCAAAATTGGCAACATTGGAAATCTTTAATGTTCAGAAAGCTGCTAATGCCAAATGTTTTAACTGTGGGAAGCCCGGCCATATGAAAAAACAATGTTGCATGCCAACACAGGCCAGAAAAAATAATATGACTTCTAATAAGAAGAGACCCCCAGGAGTATGTCCAAGATGTAAAAGGGGGTTCCACTGGCTGAATGAATGTCATCCTAAATTTGATAAGGATGGAAACACCTTGAACTCCAGTGCACAACAAAAACAACAGGGAAACTGATAAAGGGTCATCCTCTAGCCCCACTACAAAAGGAGGACCTGACGTTATGACGCCACAAGCAGCTACATCTGAGAGTGATACACCTAGTCCTTAGGATATGGAACTAATAGAATTATACAGCCCCACAAAGTTCCCACTGGGTATTATGGCCCGAGTCCACCCGGGACAGTGGGACTGATTTTGGGACGTAGTAGCTGCACAGTGAGAGGTTTAGTGGTATTGACTGGTGTTGTGGATGAAGATTATGAAGGGGAAATACATGTTATGGTAAATGTTGTGAAAATGGGAAATGTATAATTACAAAAAGGGGAACGTTTTGCACAATTATTACTTTTGCCATATGTTAAACCAATGAAGGCATCTGATAAAGTTCAGCAGGGAAGCTTTGGCAGTACCAACCTTACTGCTACACTATCCACTTTATTAAAGGAACATCAGAAACCCATGCTTACTTTACACATACGGGAAAAGAATTTCACAGGCATGTTAGATACCGGAGCTAACATTTCAATCATTAGAGCTGCAGAATGGCCCCTTGATTGGGGTAAGGTTGTGGCTCCTTCTAGACTATTAGGAATGGATGAAACTGATGCCACACAAACTTTTGTCAGTGCATCCTATTTACAAGTGTATGGCCCTGATCAAATTGTAGCTTATCTTAAACCATATATTACTAATATCCCTATCAATTTATGGGGACGGGATTTTCTTGAACAAACGAAAGCCACAATTTCTTTAAATGAACCTTTTTAATGGGGGCCATTGAATTAACACCTCTGCCTCTCAATTGGGAATCTGATACCCCAATATGGACACCTCAATGGCCCCTAACTAAAGAAAAATTGGCAACTCTTACACAATTAGTAAATGAACAATTACAAAAAGCTCATATAGAACCTTCGTTTTCCCCATGGAATTCCCGTTTTTGTAATAAAAAAGAAATCAGGAAAATGGCGAATGTTGATAGATTTAAGAAATGTTAGTAATACCTTGTCACCTATGGGGCCCTTACAACCCGGATTGCCCTCCCCTTCTATGGTACCAAAGGATGGTATGTAGTTATCATTGACTTACAAGACTGCTTTTTTACTATACCTTTGCACCCTAAAGATAGAAAACGTTTTGCCTTTTCAGTTCCTTCTATAAATCACATGGCTCCTGTTAAAAGATTCCAATGGAAGGTGCTACCTCAGGAAATGATGAACTCCCCTATCATTTGCCAATATCTCCTATCTGTTTTATTACAACCCATTAGAGACAAGTATCCTACTGTGTTTATAATTCATTATATGGATGATATACTTCTCTCTATGGAATCTGAACTCTGTTTACAACAGTTATATAATGAAGTTACTATTACTTTTCAAAATCATGGCCTGCTTGTAGCACCAGATAAAATTCAATGGAAAGCACCCTTTAATTATTTAGGACATGTTATGGAAGAATCTAAAATCAAACCTCAAAAAACTCAAATTTCTGTGCATTCTCTACACACGGTGAATGATTTTCAAAAATTGCTAGGAGATATTAATTGGCTGTGGCATCTGTTGGCATCCCCACCTATGCCTTACAAAATCTATTTAAAATTTTAGAGGGATCCCCTGACCCTAATAGCCCTAGGCAACTAACAAAAGAGGTCAAAGAAGAACTGGCCTTAGTGGAGAAACGCATTCAACAATCTTTTTCAACTCGGCTAGATTATGATCAACCAGTTTCTTTATATATATTCCCTACTGAACATTCGCCCACTGCAATTATAGCTCCGCACAGCCCAATAGAATGGGTATATTTACACACTAAACAGTCTAAAAAAATTGTGTCATATATTGAGAAAATAGGGCACTTAATTGTGTCAGGAAGAAGCCATGTACAAACTTTGACTGGATTTGATCCATATGCAATACACGTTCCCTTGACAAAACAGGAATTGCAAATTGCCTTACAGTATAACCTGACCATGCAAATGGCATTAAGTGATTTTCAGAATGTTATCTCATTTCATCTGCCAAAAGGAAAATTATGGGACTTTCTACAATGTACGAAATTCATTGTAACTAATATCATTGCATCCCAGCCTATTTCCAATGCACCCACCTATTTCATTGATGGCAACAAGAAAGGCATAGCAGGGATTGTCGGCCCTGATATCAAAGAGAAATTACCCACTACCTATTCTTCAGTACAAAGAATTGAATCATATGCTTTATATGCTCTTTTGTCACTTCAACCATTATCCTTCAACATATATACTGATTCCAAATACCTTGCTTCCCTTTTTCCTGATTTTGTTACCGCCTTTTTATACAACCTAGATGAAGAATTATATACTCTCTTTTCACAGACTCAGGCTTTAATTCGCTCACTACGGAACCTTCCTTTATTGCACATATACATGCGCATTCAGGTTTACCTGGCCCTCTGGTCGCAGGAAATGATGCTGTTGACAGGCTCATAGCTCCCCTTTTTACATCTGCCAATGACGAACACGCTAATCTTCATACCAATGCTAACAGATTGCACTCTAAATACCATATTCCTCTCACTGAAACACGACATATTATTAAAACCTGTGATGTCTGCACCCCTTTGCGCTTACAAACTACGATTTCAGGAGTTAATCCCCGGGGGCAACAACCTAATTCCCTTTAGCAATCTGATTTCACTCACTGCTCCTTAAGAAAATTTTCTTTGCTTTTTGTCTCACTTGATACATTTTCAGGCTTTATCTGGGTAGTACCTGTCTCTTCAGAATCCAACAAACACACCATTTCCACACTCTTACTCACCTTCCCCATTATGGGGATTCCTTCTGTCTTGAAAACAAACAATGGACCTGTATTCACCTAGCATTCATTTCATTCATTTTTATCAGAATGGAACATAACACACATTACAGGAATACCCTATAATCCTCAGGGTCAAGCCATTATTGAAAAGAGCCCACCGCATTCTAAAACTCATTTATTAAAACAGAAAGGGGAAATATGGAAGAGGAGATACACTTCTTATCCCATGAACCCTCAATTACTATTATCTTTAACTAAACTTAACAAAAAATAATTCTGACACTCGTGCAGATAGACATTTTACAGAAGACAAAAACAGCAAATTAGAAATCAATACACCAATATGGTATAAGCAATTTAATCAGTGGCTGCCAGGAATCTTACGACTCCTAGGCAAGGGTTATGGTCTTGTCATTGCAGATGGAGAGGAAATCTGGGTTCCCCTTTGTCATGTCCGCTACCGAGAAGGACCCCAAGACCGGACTCCCTTGGGAAGTGACGAAGTTGACGCGAAGGGTCTCATCAATGACTCTGGAGGAGCCAATGAGGAAACGCCTTCGTCTGAATCCTTACCCGACATGGGCTCAAGTGAAAAAACATGACTCATCAGGCTGAGCAGACACTGAAGAGCAAGAGGAACATCATAATTGCTCCTGGTTTAATAGATCAAGCATTGGAGGCTTTCATAAATCTAAGACAAGTTTATGGACTGATAAGGACATATTGCTGAATTGGTATAACGGGGGCTTATCGCCCCCACGACCCAGGATTGTCGTCCCCATTGTGGGGCCAGAGCGATGGCACATTTGGAAAACTCCAGCAGCCTTAGAGCACTTCGCTAGTGTTTATGGGACTATGGGTGTGTTTCGTCCTTCTAATTATACCTTCCTATACAATAGTACTGGCTATATTCAGTCGTGTGTTCACCTTCCGTACTTGTTTATTGTAGGGCATTTTGATATTGACTTATCAGCCAAGATTGTCAATTGTACTGCATGTGCATTGTATACCTGCCTTAATCACACCATTTCATATCACAACGCTAGCATTGCGCTAGTTAAACAAAGATCTGAGTTATGGCTTCCCATAAACTTAATTGAGCCTTGGACTGATTCTATATTTCTTTCTGTATTGTTGAAAACTGGGCTTAGGCGATCTAAGCACATCATTGGGTGGATTATTGCAGGCATCTTAAGCCTTATCTCCATTGTGACTGTAGGAACTTTGTCTGGTATGGCTTTACATAATTCTATACAAAATCATGATTTTATCACTGCTTGGCACAAAGACTCTCATGATCTTTGGACTCGACAAGCTCAAATAGATCGGCAATTACAAACACGAATTAATGAGTTACAAACTGTGGGTATCCACTTAGGAGATCAAGTGCAGCAACTGGCTTTCCAAACACGTATACGTTGTCACTGGAATTTTACTTCTTTTTGTCTGACTAACATGCCCTATAATAGCACTGACTATCCTTGGAATAAGGTTAAGGAGCATTTGCAGGATCTCACAAATAACTCAAGTTTAGACATCAATTTGTTGAAACAACAAGTTGCTAATTTTCAAGTTAGGGTACCTAGGGAATTGTATAGCACTCAATTCTATGATACTTTAACCAAAACCCTATCATCTCTAGACCCTAGAACTTGGCTTTCAGGAAGCAATATTTTTATATATGTATTAATCACCCTGCTCTTTTTGTCCTTGATTATGGGATACAGAAGTGTCTACTCAAGACTCCATGCCTCCCACAATGGAGTCCAACTAGCAGCCGCCATGCTTAATTTAAAAACAAAAGGAGGATATGTTGGGAAGCGTAGTGCAAAATAGCCGTAAAAGGAGAAAGTCCTTGGGAAAATGGCGAAGGGCCAGAAATACCCGGCCTTGCACTGCAGACAGAAAAACATCTCCTGCCTTTGGTTATGCTCGGCGCCAAGAGTTAATAGCGATGTTACTTGTGAAAGCGGGTTGTGGGATAAGCCCATGAGTCATTTAGAGCACGCTGTCCTTGAAATGTTTTTACTGATTATGTGTTAACTCCGTATGCACTCTGCTGACCGTATACTTTAAGCTCTTTGTTCCTGCTTCTATAAAAAAGCTTGACTGCAGAAATAAACTTGCCAGTCCTTGCCAGAGAC TCONS_00238269 . 5' 3602 TCONS_00238269 . 5' 3602 EMBV3_00664 TGTTTGTCCAGCTGATGCCCATCCTCATCCTGATCCTCGTGTCAGCTCTAAGCCAGCTCA Gene GeneID:533603|DNAJB12:NM_001017946:362_cdna Constitutive 0 NULL GeneID:533603 28 GENE DNAJB12 MGC133748 DnaJ (Hsp40) homolog, subfamily B, member 12 EMBV3_35321 ATGTCTGTGGTCTCCGTGGAGACCTCGGACGACGGTGACGACGCGGACGGTGCAGCCAGT Variant GeneID:515187|CTNND1:XM_002693586:52_cdna 826^872 4 EMBV3_18992 GeneID:515187 15 GENE CTNND1 NULL catenin (cadherin-associated protein), delta 1 EMBV3_14497 AAATAGCTCAGAGGCAAAGGAATATGGGAGGTTACCAAATCAGGGAAAGGCCCTGCCTCC Gene GeneID:615577|MGC127766:NM_001034785:30_cdna Constitutive 0 NULL GeneID:615577 4 GENE MGC127766 NULL hypothetical protein LOC615577 EMBV3_43213 AGAGTGGATGGGAGTATGTGTCCCGCCATGATGCCTGGGTGCTGTACTCGGAACTGCAGA Gene GeneID:538873|PSMB11:NM_001099386:221_cdna Constitutive 0 NULL GeneID:538873 10 GENE PSMB11 NULL proteasome (prosome, macropain) subunit, beta type, 11 EMBV3_08753 TGCGCAGATGCTCGGAAGGACCAGAATAACCCATCAGTGAACTTTGGATGTCACAGGCTA Gene BVT0102_004459 + 0 NULL GK000028.2:43935402-43961960 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160818 TCONS_00160819 1 XLOC_097762 NonCoding TCONS_00160818 XLOC_097762 NonCoding NonCoding - 28:43944052-43944996 - TSS120177 530 1 TCONS_00160818_1 43 0.49811320754717 2 0.440084835630965 0.000718353978955802 6.46007519587022e-09 0.000960319061353963 1.56681803585299e-05 0 2.62713824517834e-09 0 0 0 0 0 0 0 0 0 0 0 0 0.00129887661591959 0.000363591875866249 1.98320942500842e-09 0 0 0 0.00160791937879928 0.000146225665730716 6.48510747839378e-10 0 0 0 0 noncoding 0 0 0 0 AATTCCCCTTCAGTCCCTCAGTCTAGGAACTATCCTTTATTAAACTTGGGCCTGAACTGCAGCTGCAGCAAAATCAGGAGCCGTCCCCCAGGTACCAGGAGGCCCTGTGTTCCTGGAGGTTTTCCTCTTGCAGCTTCTTCAGGCCTGCTTGCAAACCTAAGAAACCTCAGATGAGGAAGCAGCCTGCTAATGACTTTCTTCCAGTCCACCTGCGCAGATGCTCGGAAGGACCAGAATAACCCATCAGTGAACTTTGGATGTCACAGGCTAAAAATCCACATGTAACGCACAGAACCCTCCTCAATGCGTACTGTGTCCCATGAAGAGATAGGAAAAACAGTCATGCCCGCACAGAGGACTCTTGAAACTTCCCTTTACTCGTCCAAGAGGCAGTGCTTAGCTCCGACTCCCTCCTATTCCCTACTCTCACGATAAATACCCTGCTCAAAAAGCTGATGGGAGAGACAGAGCTGAGCTTTGCGTCCTGTCTCCTTGCTTGGCCTCCCTGTAATAAAGGCTTTCATCTCTAC TCONS_00159787 r 3' 8652 TCONS_00159787 r 3' 9030 EMBV3_42831 TCTGCCCACTCCTGGCAGACCCCTCGGGAGCAAAGCTGCACAAGGTCGTTGAGCCCGAGG Variant GeneID:510154|SELENBP1:NM_001046048:76_cdna 53^419 1 EMBV3_22365 GeneID:510154 3 GENE SELENBP1 MGC129063 selenium binding protein 1 EMBV3_30237 GCTGTTGATTCTCACTGTGAACCCGCTGCTTGCTCCTGCATAAGTGTATCTGCAATACCA Gene GeneID:100140764|LOC100140764:XR_083898:388_cdna Constitutive 0 NULL GeneID:100140764 17 PSEUDO LOC100140764 NULL similar to Ras-related protein Rap-1b precursor (GTP-binding protein smg p21B) EMBV3_29684 TTGGAGAAAGGGCAGCTTTCCACGGATTTTGTATACTTGATTGAGGGGAAGAATGTGTGG Gene GeneID:790210|PPIL5:NM_001105025:142_cdna Constitutive 0 NULL GeneID:790210 10 GENE PPIL5 NULL peptidylprolyl isomerase (cyclophilin)-like 5 EMBV3_05851 CGACATGCGAGCCTTGGCCCAGGACATGGGTTGGAGACAGATGTACTTCACCAACAAGCT Gene GeneID:617339|FBXO36:NM_001082617:184_cdna UTR3_Alt 3 NULL GeneID:617339 2 GENE FBXO36 MGC152144 F-box protein 36 EMBV3_11621 CAGAGGATGTCAGCCACTTCCCAAATGCCAAGTATGTCCATGCCATCTCAGTGGATTTCC Gene BVV0102_051203 + 0 NULL GK000006.2:43863578-44306115 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32817 ACTTCAGCTAATTCAGGACAAAAGGAGGAGGAAAGCGTTATAATGTTGCAGACGTGTCTG Variant GeneID:527615|SLC35B3:XM_002697595:59_cdna 522^676 1 EMBV3_16853 GeneID:527615 23 GENE SLC35B3 NULL solute carrier family 35, member B3 EMBV3_27843 TAGAACGGTATCAAACTCTAAGGGAAATTCGACGTGCAATAGGCGATGCAGCAATGCAGG Gene GeneID:507739|PCGF6:XM_002698459:477_cdna Constitutive 0 NULL GeneID:507739 26 GENE PCGF6 NULL polycomb group ring finger 6 EMBV3_03841 AGGGTGGTGGAAAAGCTGCGCAAGGGCTCCAGGGAGAGGCTTCAGGAGCTCGACCCCAGA Gene GeneID:523504|LOC523504:XM_002689430:4_cdna Constitutive 0 NULL GeneID:523504 7 GENE LOC523504 NULL similar to F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat protein 17) (F-box only protein 13) EMBV3_35196 CAGGAGGAAAAACAGTATATCTCACTTGGCTGCTGTGTAGATTTGTTGCCTCTAGTAAAG Gene GeneID:540295|MGC142488:XM_002690778:563_cdna Constitutive 0 NULL GeneID:540295 10 GENE MGC142488 NULL hypothetical LOC540295 EMBV3_31425 CACTCTCTTCTGTGCTGAAGATCAGTTTGCGCAGGTATGCTCAGTCACTTCAGTCATATC Gene BVT0101_047062 - 1 EMBV3_15948 GK000021.2:45762272-45767403 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119528 TCONS_00119529 TCONS_00119527 TCONS_00119526 TCONS_00119530 1 XLOC_072913 Coding TCONS_00119528 XLOC_072913 Coding Coding SRP54 21:45724849-45765285 j TSS89492 4844 2 TCONS_00119528_3 264 0.0964079273327828 15 0.880573760356127 3.50064195266215e-06 5.72018836984376e-05 0.000288569432111084 1.62435395922443e-05 0.000142715144039699 3.37203841371188e-05 3.31418996222691e-05 0.000135329077128886 0.000289246003142783 0.000158332481452643 0.000213108458815105 5.86126064915728e-07 2.57071499094145e-05 1.23043053360323e-09 0.00014551039603739 6.75929025821476e-06 0.00202824365347628 0.00199228260562526 4.81429658293903e-06 0.00043841935281434 7.932154209952e-09 0.00090325551030993 0.0002432002014696 0.000221333485457508 0.000260318853036442 0.000158065970841704 4.2559903504281e-06 3.80144074951413e-08 3.4523609195776e-05 0.000197968520103807 XM_005222056.1 SRP54 PREDICTED: Bos taurus signal recognition particle 54kDa (SRP54), 0.0 4358 100.00 0.498554913294798 NM_003136.3 SRP54 Homo sapiens signal recognition particle 54kDa (SRP54), transcript 0.0 1584 91.52 0.230594549958712 TCONS_00119528_3 sp|Q2T9U1|SRP54_BOVIN SRP54_BOVIN Signal recognition particle 54 kDa protein; 0.0 542 100.00 0.988636363636364 7 coding 0 0 0 0 0.0386437027494776 0.761541163693946 0.0205269836642738 0.741182986397144 ATGTCAAAGGCCAATCAAGGCAAAGAAACATCTCAACACACTCTCGGTAAACACTCTGTAGAGACGCGCCGAGTGCCCCGGAAGCGGAAGTGTATCCCCTTCTTGAAAGGCTGGACTACGCCGAGTGGTGACGTTTCCTCATTGGGCGGAAGGTTCGGTGGCAGTCGTCGGGTTTCCAGCTGGTGGGAGTTGGCGTTGCGGTACTGGGCGCTGGAACCCTAGTTTATCCAGTTTGGGAAGTCGGGCTGTGGGGTCGCACCTGTCTGTCTGATCCCCGCGTTCCCTGGTTTCCTTCCCCGGCGTGGGGCTTCGCGAAGGTCTCTCGGGCCCCTTTGGGCCACGGCGGTAGCGGTGCCTTTTGCGATTTTCTTGTGATTACATCTTAAAGCTTTCAAGATGGTATTAGCAGACCTTGGAAGAAAAATAACATCAGCATTGCGCTCATTGAGCAATGCCACCATTATCAATGAAGAGGTGTTAAATGCTATGCTAAAAGAAGTATGCACAGCATTATTGGAAGCGGATGTTAATATTAAACTAGTGAAGCAACTAAGAGAAAATGTAAAGTCTGCTATTGATCTGGAAGAGATGGCATCTGGTCTTAACAAAAGAAAAATGATTCAGCATGCTGTATTTAAAGAACTTGTGAAGCTTGTAGACCCTGGAGTTAAAGCATGGACACCCACTAAAGGAAAACAGAATGTGATCATGTTTGTTGGATTGCAAGGGAGTGGTAAAACAACTACATGTTCAAAGTTAGCATATTATTATCAGAGGAAAGGTTGGAAGACCTGTTTGATATGTGCAGACACATTCAGAGCAGGGGCTTTTGACCAACTAAAACAGAATGCAACCAAAGCAAGAATTCCATTCTATGGAAGCTATACAGAAATGGATCCTGTTATCATTGCCTCTGAAGGAGTGGAAAAATTCAAAAATGAAAACTTTGAAATTATTATTGTTGATACAAGTGGCCGTCATAAACAAGAAGACTCTTTGTTTGAAGAAATGCTTCAAGTTGCTAATGCTATACAACCAGATAACATTGTTTATGTGATGGATGCCTCCATTGGACAGGCTTGTGAAGCCCAGGCTAAGGCTTTTAAAGATAAAGTAGATGTAGCCTCAGTAATAGTGACAAAACTTGATGGCCATGCAAAAGGAGGTGGTGCTCTTAGTGCGTATGGGTGACATTGAAGGATTGATAGATAAAGTCAACGAGCTGAAGCTGGATGACAATGAAGCACTTATAGAGAAGTTGAAACATGGTCAGTTTACGTTGCGAGACATGTATGAGCAATTTCAAAATATCATGAAAATGGGCCCCTTCAGTCAGATCTTGGGGATGATCCCTGGTTTTGGAACAGATTTCATGAGCAAAGGAAATGAACAAGAGTCTATGGCAAGGCTAAAGAAATTAATGACAATAATGGATAGTATGAATGATCAAGAGCTTGACAGTACTGATGGTGCCAAGGTTTTCAGTAAGCAACCAGGAAGGATCCAGAGAGTAGCAAGAGGATCCGGTGTGTCAACAAGAGATGTCCAAGAACTTCTGACCCAGTATACCAAATTTGCACAGATGGTAAAAAAGATGGGAGGTATCAAAGGACTTTTCAAAGGTGGTGACATGTCTAAGAATGTGAGCCAGTCACAGATGGCAAAATTGAATCAACAAATGGCCAAAATGATGGATCCAAGAGTTCTTCATCATATGGGTGGTATGGCAGGACTTCAGTCAATGATGAGGCAATTTCAACAGGGTGCTGCTGGCAATATGAAAGGCATGATGGGATTCAATAACATGTAAAGAAGATGCCTTAATATAAAGTGACTCTGTTGATTACATTATTTGCTGCGACCTCAGAATTTCCCCTCCTTTTTGCAAATGGGAAAAAAAAAAGTATTTTTCTTGCCTGTCTTGCCCCCTTTCTTTCTCTTCTTGTCTTTTTCCCCCTCCTTTTCTTTTTCTTTTCTTCCTTTTTCCCTTCCTCCCTTTCATATGGGAGGAATATATGGTTGTTGTGGAAATAATTATATTTTTGCTTTAGATTTTCTTTTCTGTTAGTTTCAACCATCCTAACACTTCTGAAGTTAAATCATGATGTAAAATTTTAGTACTTAAAAGTTTTTAATTGTCTCAAAGGCCAACCATTACCTTTGTAAACAGTCCTGGTCAATAGTTACATGATGTCTCAATAAAAGTGCTATACAATAAACTTCAAAGTCATTATAAGTTAAGGGGTTGTTAACTTTCTTTATGGTTTGAAATGATCAGTGTATCATGTTAAAAGGCAGACAAAAATAATATTTAAAACTGTTCCCAGAAGTATACCTTTATTGGGACACATGGTAGAGTAACCTAACCATTAGTATTAGGAATTTTTGTTTAACTTGGAATAATGAAGATAATTTTGCCATAGAAAATCTTAACTCTGACATTTAAATTGAAATTGTGAATTTGGTTATAGTTCACAATTTAATGTTTTGTATATAACTTTCATTTTTTTTACCTCATATTTTTGAAGCCTTAATGGCAATATTTGATTTTCTTGCAAAGCCAATTTTGTTATGTTTCTTACATACCAAAAATCTGCTTGAAGAAATTGATATACTTTGGTGATAATAGCTGATGTATAGATCTCCTAATGGGAATATAATTGCAGATATTAGGATGTCATTATTATATATTAAAAATAATGAGACCATAACAAGATTGACTTGGTTGTTGGTTACTTTGGATTGCTGTACAGTTCATTTAGAACAATGGCTTTTAAGTAAGTTATGTCATTAATTTAAAACACTACCATAATTCTTATACCTATTCATTATTCACACCGTGAAGATAATAGATACACTGTTATAACGATGTATTTTGAACTAGGATCAACTGATCTTCTGGAGAAGGAAATGGCAACCCACTCCAGTTCTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGTTACAGTCCATGGGGTCTCAAAGAGTCAGACAACGACTGTATGACTTCACTTCACTCCCTTCACTCACTTCATACTTTATTGCTGGAGAAAGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCATGGATGGAGGAGCCTGTCAGGCCATGGTCCATGGGGTCGCAGAGAGTCAGATATGACTGAAGTGACTGAGCATACCTGCGCAAACTGATCTTCAGCACAGAAGAGAGTGAAAGAAATAGCTAGTTTTTGTAGTATTAATTTTTTATGTCTCGAGTGTTTTAAAAAGATCTTAAGAGCCACAGTGTCTTCAGAAAATACATAGAGAATGCAACTGATTTTCTTATTTACTTGGGTAAAGATTTTGTATCCCACTAAATCATTTTCACCAGATAAAAACTTTAATATCCCTATGGAATATTTGTATAAACTGTAAGAATTATGTATCTTTTCTTTTGCAGAAATGTCATCACAAGGTCCAGCTACAGAAATTAGACATTATAGAAAATACTGTTCTCCAAATTAGTCTTTAATGCATGCCACCTTTTCTGGGCATGCATTATTGTGATTTCTGTCCTCAGGGACCACGTTTCCATTTTGACCAAAAAAAAAAAAAATGAGATAGATACTTGGCCAGACTTTATGGATTGGGGCATTGTTTTTAGCATTTTTTGTGTCTGATGCAAATTATCTTTTTCAGAAGCAAAAATAACAGTGGCAAAGGCCAGTAAAAGTCCAGAATGTGTCATTCAGCTTTTGTTTCTCTTTCCTCATCTGTAGAACGAGGAAATTGGAGATACTCTGACTCCATTAATGCCTCAACCTGGCATCTTTTTTGTTACAAAAATTATCCTCAGTTCTCAGTTTTTATCAAAGTACTGATTTTTTGAAAGCATGAGTATACTAAAATCCTTTAATAATCTGAACAAATTTCCTTTTATTTTTCACTATTGTTAAAATTAGTTCCTTAGCTTTTTGATATATTTTCTATTACCAACTTAGAGCACTAGCTAGATCTAATATCATACAACATTGGATTCTTCCTGGATTTGATTATAATGTTATGTAAATATGTACAAATGTAAAATTAGGTATAATTTATTTTACTTACAGTGCTTATGTAATTTCATAACGAAAACAATGTAATCAAAAAAATTATAATACCAAGAAAAGGCAAATTAATAATTTAATGGATGTCAGTGTTCTGAAAGTATCATATTTGTTGGCATGTAGGATATAAGGTATACATACACAATGCATTGAAACTTTATGGAGGCATTTTTTGGGGAAAAAATTACTTGTCATCATATAGTAAAAGTGATTTTTTAAAGTGCGTTACATAAACCATTATATTGTTGAAATAAATATAGTATATCAAAATGTGAGAAGTCCTAAATTCTGATATGCAATAATATTATACTAACCTTGAACAGAAGTATAGTGCACATGTCTAAAAAGAAATGTATTATTATCAGAAATACTGATATAGACAAGGCAACAAAGCCAGAAAATTTACTAGAACTAAAGTCTCATATTAATACTGGTAAAATGAATATATTAATACCTATTATCAGTGAATGTAGAGGTTAAGTAGCTCTAGTACATAAAAACAAATATTTTGAGTAAAAAGTGGAACACAGTGTTTAAATGTGAAGAAATTTCAGCTTACTGATTGTATGCAGTAAAAGCAAGTGTTTTATTATAGTAAAATAACAACCACAGAATTTGAATGAGCTCTAATAAAAACTGTGTCAGTGAGAACCATGGCTAAATAACAACGAAATGTAAGTAAGTTTTGGTCTTCTTAAAACCTGGCAATAATTATTAATAAAGCCAAGTAAGTTATCATATTCAAAACTAGAAA EMBV3_02363 GTTACACTGAAGAAGCCCCCTGGAGCTCAGGTGATTCCTGACTCTGATGCACATCGAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32825 TTCCTTTAACCCAGTAGTAGCCTGAGCGATGACTCCTGAGCTCTGTAGAGGGGAAGCTAT Gene GeneID:783269|BCL11B:XM_002696767:442_cdna Constitutive 0 NULL GeneID:783269 21 GENE BCL11B NULL B-cell CLL/lymphoma 11B (zinc finger protein) EMBV3_12830 GTGGAAACATCTGATGCATTTGCTTCATGACCAGCCATAGCTCTGTGACTGAATCTTCTG Gene GeneID:504733|TEC:XM_002688249:152_cdna Constitutive 0 NULL GeneID:504733 6 GENE TEC NULL tec protein tyrosine kinase EMBV3_19404 GGGGAACTTCCTGTTGTCACCGCACATCGTCCGGGTTAGTTATCTAAGCTCTGAGTATAG Gene BVV0102_449663 + 0 NULL GK000001.2:82210750-82240982 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38253 TGAACGCCAGGTTTAAGATTTGGATGTAGTTCTGCAGTTGCCTCCGTCTGGTTAGCCACC Gene GeneID:786279|MLH3:XR_083781:331_cdna Constitutive 0 NULL GeneID:786279 10 PSEUDO MLH3 NULL similar to mutL homolog 3 (E. coli) EMBV3_35990 TTTTAACCCGGCCGGTAGCGTTTTAAAGAGGTCCCCTGAGGAGTTCTGGCCACTGACTAA Gene GeneID:100295316|LOC100295316:XR_084581:178_cdna Constitutive 0 NULL GeneID:100295316 14 PSEUDO LOC100295316 NULL similar to PDZ-domain protein scribble EMBV3_11859 AGATGGTCCTCCAGTTCTTGCTGCACTCCCAAAATGACAGATGGCGAGACCTGGACAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43237 AGGCCATGACAATCCTTTTCCTAACCTGCAAGAGACAGGCAACTCGTGGTTCTCAGTGCC Gene GeneID:786753|LOC786753:XM_002707900:1_cdna Constitutive 0 NULL GeneID:786753 Un GENE LOC786753 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_15312 TTGAAAGTTTACCACTGCATGTTTTCTGACTACATAACTCTTCAAATTGGGCCTTTGCTC Gene GeneID:511783|PHKB:XM_002694773:563_cdna Constitutive 1 NULL GeneID:511783 18 GENE PHKB NULL phosphorylase kinase, beta EMBV3_01969 TCTCCTGGTGGGTATCTCTGCCTTGCTTCTGTCTCAAATAAACAAACTGTAACAGGAGGG Gene BVT0102_191538 + 0 NULL GK000013.2:60233112-60244888 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08166 GCAGTTGGCAGGCTTTCCAGTGGCAGTTCCAGCTCATTCAGTTGCACAGCAGCAAACAAA Gene GeneID:538505|STAM2:NM_001076106:124_cdna Constitutive 0 NULL GeneID:538505 2 GENE STAM2 NULL signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 EMBV3_36639 GGATTGCAGCTGTAACTGAAATCCCTTTAGGTCATCTACTACATGGGCGAAACTTGGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20068 CCACCATCTGTGGAGGATGGACCATGAGGCTTTGCTAGTGTTTAGCTCATCCTTTGCCAT Gene GeneID:100337134|LOC100337134:XM_002690441:189_cdna Constitutive 0 NULL GeneID:100337134 10 GENE LOC100337134 NULL phosphodiesterase 8A-like EMBV3_21821 TTCAATGCGCAGTTCATCAATGTCCATGGCAAGCCGTCCCTGGCTGAAATGGGGTGTTAT Gene GeneID:508907|PARS2:XM_002686377:178_cdna Constitutive 0 NULL GeneID:508907 3 GENE PARS2 NULL prolyl-tRNA synthetase 2, mitochondrial (putative) EMBV3_00513 CCATGACATAGTTGGAGATTTTGTGTTTCTCGCCATTCAGCAGGAAGAAGCCCAGTTCCG Gene GeneID:535725|LRRC58:XM_002684787:128_cdna Constitutive 0 NULL GeneID:535725 1 GENE LRRC58 NULL leucine rich repeat containing 58 EMBV3_31932 CCGCATCTAAGGCAGGAAGATGGTGGCCGCAAAGAAGACGAAAAAGTCACTGGAGTCGAT Gene GeneID:513031|RPL30:NM_001034434:30_cdna Constitutive 1 NULL GeneID:513031 14 GENE RPL30 MGC127434 ribosomal protein L30 EMBV3_32503 AATGTTTACAGTCTCTGCTGGTCCCCTCCGTGTAAATACCACTACCACCCGTGCGTTATC Gene GeneID:513347|TNRC4:NM_001076845:97_cdna Constitutive 0 NULL GeneID:513347 3 GENE TNRC4 MGC139830 TNRC4 trinucleotide repeat containing 4 EMBV3_25682 TCCAGTCACCCGGGCCTTGCATATAAATAATGGAGCATACAGTGAGCACATCTAGCGATG Gene GeneID:508312|SFRS2:NM_001034318:362_cdna UTR3_Alt 3 NULL GeneID:508312 19 GENE SFRS2 MGC127100 splicing factor, arginine/serine-rich 2 EMBV3_10675 TCTGATCAGTGCTTATGTTACAATTGTTGATAACTAACCAAAGTAGATGCCTGCGGAGAC Gene GeneID:511059|FRYL:XM_002688268:8_cdna Constitutive 2 NULL GeneID:511059 6 GENE FRYL NULL FRY-like EMBV3_34883 CTCGCTGGGGAACGATAGGTTTGTGTGTGACAAGCGCCGTCCAGGTGTAAAACTTCACCA Gene GeneID:615412|LOC615412:XR_084077:804_cdna Constitutive 0 NULL GeneID:615412 25 PSEUDO LOC615412 NULL similar to BAI1-associated protein 2-like 1 EMBV3_38738 GTTGATGAGCAGGAAGAGCGTCGGAGACAAAAGCAGATGAAGATCCTGAAGAAGGAGCTG Gene GeneID:529613|DDX24:NM_001099045:259_cdna Constitutive 0 NULL GeneID:529613 21 GENE DDX24 MGC166267 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 EMBV3_00815 AGAAAGCCATTGGGGCAGTCCCCCTGCTGATGGGGAAGTACTACATCGAATGCTCGAAAA Gene GeneID:539259|NAPSA:XM_002695127:634_cdna Constitutive 0 NULL GeneID:539259 18 GENE NAPSA NULL napsin A aspartic peptidase EMBV3_17007 GGTGAAGCAGAACCACATTCTGAGCCTCTTTCCATACCCATTCTTTGGCCTCATTAGCAC Gene GeneID:509837|SUOX:NM_001034366:974_cdna Constitutive 0 NULL GeneID:509837 5 GENE SUOX MGC129011 sulfite oxidase EMBV3_29815 ACCAGGTCTCCTGCTTCCTTGCTGCTCTTGGGCTGTTTTGACCTCACCCATATCTGAACT Gene BVT0102_060013 + 1 EMBV3_13277 GK000018.2:64182958-64202392 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087666 TCONS_00087665 TCONS_00087667 1 XLOC_052565 Coding TCONS_00087667 XLOC_052565 Coding Coding - 18:64184723-64190285 - TSS65073 920 1 TCONS_00087667_1 180 0.159782608695652 4 0.83528142420428 0.00330273033579572 0.0026770641341397 0.00226466745184419 0.00341160927936248 0.00576898935268948 0.00108728956802971 0.00110294458351611 0.00283841980410021 0.00246136740266862 0.000559029426946948 1.43804522569201e-05 1.12249444543529e-14 0.000902789217282909 1.93105056163525e-15 0.0016981230527621 0 0 0 0.00358430891658976 0.00374808503251753 0.000292760385877917 0 4.55039321089194e-13 0 0.00707257387190872 0.00650246523187094 0.00405136116865219 5.70652348511102e-13 5.80437610352484e-05 8.92341514414825e-14 NM_001002888.1 ZIM2 Bos taurus zinc finger, imprinted 2 (ZIM2), mRNA. 0.0 1094 99.19 0.671739130434783 NM_003447.3 ZNF165 Homo sapiens zinc finger protein 165 (ZNF165), mRNA. 8e-27 125 82.26 0.133695652173913 TCONS_00087667_1 sp|Q9UL58|ZN215_HUMAN ZN215_HUMAN Zinc finger protein 215; 5e-28 110 49.54 0.6 1 coding 1 1 1 1 -0.127983558078383 0.290284633818651 0.00342949782274533 0.955578656649214 CTCCCAGCGCTCTCTGTGCAGCGCGGTCCTCGTGGGCCCCCCGGCGGAGCTGGCCGGAAGCTGCCTGCGTTTTCCGAGCGGCGCTGCGGCCGTCCCGCCGTGCACACGCGCAGACCGCGCTGCGCATGCGTCGCGGGTTTGCGCGGCAAGTCTGAGGTGGCGAGGTTCGGTCAGGCGAGGGTGTCCGTGTGCGAGCCCACCATCTTCCACAACAGTGTGCTTTGAAGCAGCCTGCCTTTTAGAGTATCTCCATCCTTTGAAGGGTCAAGCTGTAAAAATGCTCCACATGAAAGAGGTTTTGGATGACATCTTGAGGAATCCCCAGCTCATTCATCTACATGATCAAGAAGAAAATCCAGAAACCACCCCCATAAGAAACCCAGAGGTTCTGAGAGTTTCTCATCAGAACTTTAGGTATTTTCAATCCCTGTCGGTGACAGGGCCTCACCAAGCTGTGAGCCAAATCCAGGAGCTCTGCTGGCGGTGGCTGCAGCCAGAGATCCACACCAAGGAGCAGATTATGGAGCAGCTGGTGCTGGAGCAGTTTCTGAACATCTTGCCAGAGAAAGTTCAGATATGGGTGAGGTCAAAACAGCCCAAGAGCAGCAAGGAAGCAGGAGACCTGGTGGCAGACTTGATCCAAGTATGTGAGGAGGAAGGTTTCTCTCTTCAGAACTTTGTTCTTGCCGAAAAGAGAAACACCAATGAACACCAAAAGGAGGACACAGAGATGTCTGACAGTAAACCATTTGTTACATCTCAGTGTTCATGTCAAGGATCCCAAGTGAAGATGCCCACAGAGACTGCTGAGGTAATATAAAAGAGCTTGTAAGTGGGTGGATTATGACAAACTGGGAGGCACCTGCCCCATCAAAGGGGCAGCTGTGACTCAGCTTCAGCTAATGGTGCCATGTGAGAAT TCONS_00084891 TCONS_00084892 r 3' 1049 TCONS_00084891 TCONS_00084892 r 3' 1205 EMBV3_09389 CCTGGAGACCAGCAAGATGAAGGTGCTTAAGTTCGTGGCTAAAATGTACAACCAGGACCC Gene GeneID:618008|LOC618008:XR_083793:455_cdna Constitutive 0 NULL GeneID:618008 11 PSEUDO LOC618008 NULL similar to necdin-like 2 EMBV3_00963 GGATTCCAACTCCAATGCAGACAGTGAGAAATGGGTGGCAGGAGATGGCCTGGAAGAACA Gene GeneID:617265|TNIP2:NM_001102310:200_cdna Constitutive 0 NULL GeneID:617265 24 GENE TNIP2 MGC157398 TNFAIP3 interacting protein 2 EMBV3_16563 ACTGTCTGTGTGTTTTGATTATCCTTGTGAATTTGGATCTAACAGCAGAAACAATGCCTG Gene GeneID:505547|PRPF39:NM_001109789:169_cdna Constitutive 1 NULL GeneID:505547 21 GENE PRPF39 NULL PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) EMBV3_17735 GTGACTTTGTCCTGTGCGTTTTTGCCCCTGCCAACCAGCCAGGTGTATTTTCAGCAGACA Gene BVV0102_137805 + 0 NULL GK000028.2:1313126-1347110 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42651 AACACTAAACACTGAGTTGTCTTTGCTGAGTCCTGCGCTGCCCCGTGTCCCTCAACTTCT Gene BVV0102_185160 - 0 NULL GK000001.2:143637542-143645290 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14347 TCTGTGTGCTTGCTGAGTCCTGGGTGCTGTCCTTAGACACGAGCCGTGTGAAATACTCCT Gene BVT0102_242618 - 1 EMBV3_16185 GK000019.2:30262798-30276154 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093223 TCONS_00093222 TCONS_00093225 TCONS_00093227 TCONS_00093224 TCONS_00093226 1 XLOC_057106 Coding TCONS_00093223 XLOC_057106 Coding Coding - 19:30269404-30274871 - TSS69992 4765 1 TCONS_00093223_7 303 0.397691500524659 3 0.128796194657885 0.000564290998455013 0.000279733583729889 0.000458834415413774 0.000946339053608797 0.000300938711726852 7.42509714079926e-05 0.000190730075762105 0.000187298045233879 1.8251420370498e-05 9.83030860683465e-05 6.85458528718984e-17 0 2.5048400271857e-24 1.15848548749625e-20 3.26784550718251e-05 0 0 0 0.000425628909446031 0.000550220985611576 0.000238314105569268 2.39882832456677e-14 3.74803966798671e-19 0 0.000180745281723503 0.000227893153091558 0.000977304262770132 2.77785988759005e-72 1.01880686348414e-06 0 XM_005212209.1 C10H14orf1 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf1 (C10H14orf1), transcript variant X1, mRNA. 0.0 1404 89.06 0.226023084994753 TCONS_00093223_7 sp|Q10126|YSM6_CAEEL YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6; 3e-12 66.6 26.67 0.676567656765677 1 noncoding ATTAACCTTACAAAGCCTCACAGGCTAACCAAACAGCATTTCTCTGCTTTTTGCTGGAATTACAGCCAAGTCAGTGCAGAAACTCCTGGTATCCTAAGGCTGAACAGAAGTTCTGACAGGGAATGATGTATGTCTTTGATTAAATTTTTTAAATGGAGTGATCAGTTACCAGAAAATGGAATCTGCTTACTCGAGAGATGCTTTCAAATTATGTGTTTCATGGAAGCAAAATTAATTAAAGAGCTTCCTGGTCAGGCTTCTGACTGGGGACGCCTGCGTGGAGGCTGACTCTGCATTTCTGGTCAGCTCCCAGGTGACGCTGCAGGTACAGGACCACGTCTCGGTAGCCAGGTTGGAGACAGACTGGCAGACGGGTTCCCCCAGCCCTTCCTTCTTACACAGCAAGGGCAGGCGGGATGCTCTCTACCACGTCTGATACGTGATGACACCACGTCCTCCAAATCACCACAGAGACCTGGGAGCCCAGCAGATGCAGAGCCCAGGGGCATCGAGACTGGGGGGCTTGCGCCCCGACTACAAAGTTCAACTTGGCCTCATACCTCTGAGTCATCCTGAAGACACTGGATAGGGGCCCCCAGCTGCAGACCGCCCCCACCAGGAGTACTTCACACGGCTCGTGTCTAAGGACAGCACCCAGGACTCAGCAAGCACACAGACCACCAGCCCCACGGCAAGACTGACAGTGACCTAGTGCCTCTCACTGCACCTGCAGGGAACCTGCCGGCTCTGTCCTCTGGTTAGTCCCCCCTTGGTGTCCCGGGTCCCAGAAAGCACCCCCAAGCCTCTCAGAGCGGGACCAGCATTCGCCTCGACCTCTGTCTGCTCTCCTGCAACTCTGAGTGGTGCTGAGGAGCCCTCATCTGATGGCCTGTGTCCCCTCCCAGCCCCGTTTTTCCGGCCCCAACCCACCTCTGCTTCGTCAGAGCTCTCGGAGGGTCTCCGTTCAGCCCCTTCTTACCTGTGACCTGGTGGTGCTGGGAGTTCGAGACCCGGTCTAGGCTGTTGCAGCGAGGGCGCATGATGGCCGATGCCTTCTCTACCTCATGCTGTTCTCTCTCAAGCCTGGCCTTCAGGAGAGCTCTTTGTCCCTTCTACAATTTTTTTTTTTTTTTTTTGAGCTATAAACAATCAAATGCATACATCTCAAGTTTATACTTAACACCTCTTGAGCTACACGAGTCACCAGCCAGCTCCAGCTCCAAGCATCTCCACCGCTCCTGGAAGGCCTCTGGGCCCTCTGGCCCCGCCCACCTCCTGCCACAGATACGGAAACCCCCACAGGTGGAAGAAACTGACTGCATGTTGATCACAAGCACACAGACCCCAGAGTAGTTGAAGCCAGGTTGATGGAGTTGACTCCTGATTACCTCACCACCAACCAATCAGAACAATGTCCTCCAGCGGATCACACACCCCATGACACCTTCTCCCTCACCATGTCTTTTAAAATCTTTCTCAGAATTTATCAGGGAAATTTAGGCCTTTAGAGCATGAGCTACCTGGACTCTCTGTTCAGTGCTGCGATAAATGCTGCACTTCCCTTCACCACCAAGGGGTGTCAGTAGACCGGCTTTACTGCCTATGGGTGAGTATTTTCTGCTTTATTGACTATGCCAAAGGCTTTGACTGTGTGGATCACAACAAATTGTGGAAAATTCTTAAAGAGATGGGAATACCAGACCATCTAACCTGCCTCTTGAGAAATCTGCATGCAGGTCAGGAAGCAACAGTTAAAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGACTATGCCAAGGCTCTATATTGTCACCCTGCTTATTTAACTTATATGCAGAATACATCATGAGAAATTCTGGGCTGGAGGAAGCACAAGCTGGAATCAAGACTGCAGGGAGAAATATCAATAATCTCAGATACACAGATGACACCACCCTTATGAAAGAAAGTGAAGAACTAAAGAGCCTCTTGATGGAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAATATTCAGAAAACTAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGATGTGGAAACAGTGGCAGACTTTATTTGGGGGAGCTCCAAAATCACTGCTGATGGTGATTGCAGCCATGAAATTAAAAGATGCTTACTCCTTGGAAGAAAAGTTATGGCCAATCTAGATAGCATATTAAAAAGCAGAGACATTACTCTGTCAGCAAAGGTCCATTTAGTCAAACCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACCATAAGGAAAGCTGAGCGCCAAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCGAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTGATGCACAGAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGACTCAGGGGGGAGGAGAAAGGCTGGCAGAGGATGAGATGGTTGGATGGCATCACCGACTCAATGGACATGAGTTTGACTAAGCTCTGGGAGTTGGTGATGGACAGTGAGGCCTGGCGTGCCGCAGTCCATGGGGTCGCAAAGAGTTGGACATGACTGAGTGGATGAACTGAACTGAGTGGGCCCAAGTTTGATCGGAGTCTGACCTGAATACCGTGGTAGGGGTGCTGCCCGGCTATTTCACTCTAAGCCGCTTGTGTCCTCCCTGACTGGGTGCAAACCCAAACCCAGAGTCACACTCGTGATGTGGACAGGACACCCCTCCACAATGAGGTGTTGTGGCTCCTAGAAAGCAAAGGACCCAATTATAAACTTGACTTTTCACTGACTGGATATTCAGTGATATTAAACAAAAACAGATTAACTTTTTTTGGTGTGATAAGGAGACTGTGGTTATTTTTCAAAGACTAAGCAAGATGTGCACACATGCGGGACTGGGTAGGAGGGGGTGGAGGTGTAGAAGAAATGAGCTCAGCCGTGTTGAGAATTACAGAAGCTTGGTGATGGGCATATCAAGTTCACTAAACTAGGCCACTCTTTAAAATTTCCCACTATAAAAAGAAAAAGCTTTTCTTTCAATTAAACATTCACAAAGATGTTTTCCTGAAATATGATACAGGGTGAGTGACTTTTAACACCCCCTGAGGGGGTGACATTGGCACCCACAGACTCCTGCATGGTCAAAGCAACAGTCACGGTGGGCACCCTGGCGGGTGGATCAGATCAAGCACTGCTCTCAGCCCTTCCAGGGCCCCCTCAACACTCAGAACAGGGTCCCTGCCATGAACTCTGGGGCCTGACACATATGGCTCCCGGCTCCTTCTCCAGCCCTCCTGTCCCTGAGACTCACCAGCCACTGTCACACTGGGCTCCTGCTCTTGAGTGCCACACACTCACTCCGGGGTCAGGGCCTTCAAGCTGGAAGGTCTCCCCAGATATACGGCTCATTCCGTTTCCAAACAGCCCCCTCCCAAAGGAGTCCTTCCATGACCAATCACACCGTCACCCACCCTCGTTGCTCTCCAGCCCTTACCTTCTTTCTTCTTTCCAGCACCTCTGACTATCTGACCTGCTCTATGTATTTCACTGTTGACAGTCTGTCTGCCACACTGAAGATGAGCTCCCCTAGCAGGAAGGTGCTCAGTCCCTACCCTACCCCCTGCCCGTCTCCAGCACAGAGGACAGGCCAAGACACAGCAGGGAGGTGCTCAGCCCCCTCCCGTCTCCAGCACAGAGGACAGGCCAGGACTCAGCAGGGAGGTGCTCAGCCCTCTCCTGTCTCCAGCACAGAGCTCAGGCCTGCACTCGGCAGGGGCAGGGAGGTACTCAGCCCCCTTCTGTCTCCAGCACAGAGGTCAGGGAGGTACTCAGTCCCCTCCTCTCTCCGGCACAGAGGACAGGCCAGGACTCAGCAGGGAGGTACTCAGCCCCCTTCTGTCTGTAGCACAAAGCTCAGGCCTGCACTCGGTAGATGGGGAGCAGATGCACAATCAACACCGAAGAGACAGACACGCAGGCTGCTGAGCAGAGCACCTCTAGAAGGGTGTCCTGGAGCCAGACATGAAGAAATGCTCGCTCATGACCTGTTGATGGACCCTCAAAGGCAAGAAGGTACCACCTTGTGAACCGAGTGTAAGCAGAAATGGCACAGAATCAAACCAACTTTGCCCGCAATGGGAGGAACCAGGCCTCAGGACAATCTGAGCAGTGACACACAGCGACTGGCTCCTGAGGTCAAAGTGGGAGTGACACACCACTGCTAAAACCAGAAACGCTTGACAGAAACGGTCATGGTCTGATAGAGCAGCTACACCCGTGGTCAAAGCCCTCGCGAAGCCAGGAGCGCTCCAGCCACCCACTGTCCTGAGCATCACATTCTAGAACTTGGGAGAACTGCCTCCTCCTTAGCAGACTCAGAGCTGCTGGAAGTCCAACAGCTTCACAAGGCCCCAGCGCCCACCCACTCCTGAAGCAGAACCTGCTCTGACCATGACCATGTGCTCACGCCCTGCTGTTCCTGTCAGGACCAAATGCCTCCAAGGTCCTGGCTTCAACTTGGCTTTTCCCACAACTCTTCTAAATCTGGACACCACTTAAGAAAGCAGGTGTGAACAGTTCAGTAAGGCGAGGTAACCAAACAGCTTCAGGTTCAGCTATGTGTATCGGGGTGGGGAAACAGCAAGAGGTGG TCONS_00096319 TCONS_00096320 r 3' 1267 TCONS_00096319 TCONS_00096320 r 3' 6733 EMBV3_07563 AAGTGGCCCTGGAGCACAACTTCGTGACCCTGAGGAAGAATTACAGAGGTTACAAGGAGC Gene GeneID:521221|TSPAN16:NM_001075817:59_cdna Constitutive 0 NULL GeneID:521221 7 GENE TSPAN16 NULL tetraspanin 16 EMBV3_05794 GCGGGGACGCAACGCCTGTTATAAATTATGACCTACTCTGTGCTGTTTCCAAACTGGGAC Gene GeneID:506601|RCAN3:NM_001045945:84_cdna UTR3_Alt 2 NULL GeneID:506601 2 GENE RCAN3 DSCR1L2 MGC137632 RCAN family member 3 EMBV3_19878 GCTGCCATGTTTGTCCTAGCATCTACCCGAGTCTCCGCCTTGACTGAGGTTCTAGTTTAT Gene BVT0102_232288 - 1 EMBV3_38796 GK000014.2:34321882-34396598 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32129 TGTGAGGAGCCTGAACACAGTACCAAGGATCACGGGCTGGACAAATGCTTCCAACATGAA Gene GeneID:527380|NT5C1B:NM_001038555:153_cdna Constitutive 0 NULL GeneID:527380 11 GENE NT5C1B MGC133707 5'-nucleotidase, cytosolic IB EMBV3_40365 CCAGACCCCCCAGAGGCCCACGGAGCCCAGCCCTCCTTACAGCCTGGAAAAAATGACAGA Variant GeneID:616795|FAIM:NM_001079626:84_cdna 137^195 1 EMBV3_18342 GeneID:616795 1 GENE FAIM NULL Fas apoptotic inhibitory molecule EMBV3_33908 TTTGCAAACGTCGGGGATTCCTATAGTGCCCATAGCAAAGGTGGAACTCGATCCTGAAGG Gene BVT0102_354989 + 0 NULL GK000019.2:53342594-53360163 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100802 1 XLOC_061044 NonCoding TCONS_00100802 XLOC_061044 NonCoding NonCoding - 19:53356087-53356899 - TSS75178 812 1 TCONS_00100802_2 73 1 0 1.67557869650342e-05 0 0 0 0 8.36997466473848e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.54870702025972e-05 0 0 0 noncoding GGTCCAACAAGAAAGGTGGGGAGCTAGGTTCCTTCTTCCCTTGGTTTCTAAGTGTCACCGGCTGATCACTTTGAAAGAAGGGGTAGGGACTCAGCGGGAAGGATGCCTCTACCCACCCCCCACACTAGCGCCCTCCATAGCAGGTACAGGCAACCTCCCTCACCAACCAAGGAGGCCCCAGCTCTGGGTCGCACCAAGACTACAAGCCCATTTCTCAGACTTCTCACTTAGTCTCCAAACTCTCGGGGCGTCGAGGTCACTCAGTGACCGGTGTTCACACTCTCTCCAATCCTGGTGTCTTGCAAACAGATGGCAGCGGTGCTCGAGTCAGGAGTGAGACACACCCCCATCACCAAACCTGGAGTTTCTCCGCCCACACCGCGGGACTGAGTTTCTCTGCAGCGGACAAGAACGGGGCTTGGTCTGATTGTTCTCAGGTTATTCTATGCCTCTCCTTTCCTTCAGGATCGAGTTCCACCTTTGCTATGGGCACTGTAGGAATCCCCGACGTTTGCAAACTCAGGCACTTCCAAAGCGCTAATTTTGTTCAGAACAAGTGTTTTCACAACCAGGCATAAAGACAGGCAGAAAAATGCGGGAAAGCAAAAAAAAAAAAAAAATTACTAAATACCCCCTGGAGGAGGGGCCGTGCACAACAGCGCCAGGGTTTTTCATTTCCCACTTGAAGCTTCGGAGGCACTTAGGCAAAGAAGAAAGAAAAGAGAGTGAGAGAGGTACGAGGGAAGAAAGAAAGGAAAGAAGGAAGGAAGGGAGGGATGGAGGGGAAAAGGAGGAAAGAAGAGAAAGACAGG TCONS_00094490 TCONS_00094489 TCONS_00094488 TCONS_00094491 . 5' 2404 TCONS_00094490 TCONS_00094489 TCONS_00094488 TCONS_00094491 . 5' 2404 EMBV3_22607 TAGATCTATAACAATAGAAACAAAAAATTAACAATATAAATGAAGAATTTTAACAGATCT Gene BVV0102_002524 + 0 NULL GK000009.2:7084837-7496016 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42887 GAAGATCTGCAGGTTATTTTGGAAAAGGGCTGGTGTGGATGGAAGGGCCCAGAGTTTTGG Gene GeneID:617788|UFSP2:NM_001076477:82_cdna Constitutive 2 NULL GeneID:617788 27 GENE UFSP2 MGC142326 UFM1-specific peptidase 2 EMBV3_19744 AAGATGAAGCTCTGGAGAAAGACTTGAATGTGAGAGAGCAGCAGTAGATGCGTCTTATAT Variant GeneID:506012|TEX12:NM_001034263:44_cdna 243^294 2 EMBV3_01418 GeneID:506012 15 GENE TEX12 MGC127869 testis expressed 12 EMBV3_16207 GGAAGCTGAGGTGCTGCAGAAACAAAGAGGGAGCAGAGCTGAAAGTGGAGAGTAAGATAG Gene BVT0102_063612 - 0 NULL GK000006.2:110178475-110339526 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17594 GCATGGTATTAATTTCCATTGTGACGTTGGCATTTGGGGAAATGAGTAGCTGTTAACACC Gene BVT0102_164411 - 1 EMBV3_03344 GK000028.2:18361521-18363060 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160264 TCONS_00160266 TCONS_00160269 TCONS_00160270 TCONS_00160267 TCONS_00160263 TCONS_00160268 TCONS_00160265 1 XLOC_097619 Coding TCONS_00160264 XLOC_097619 Coding Coding RTKN2 28:18360843-18395660 j TSS119901 3243 1 TCONS_00160264_1 302 0.0289855072463768 5 0.906996783088235 0.000387416457688926 0.000301782723540859 0.000410431232886587 0.000644353594653394 0.000390932769531517 0.000249101194427462 0.00068875580352453 0.000251967239674491 0.000854965986375082 7.00190887599218e-05 2.46799271884811e-05 7.92801795435947e-05 3.37612249641446e-05 0.000510187162690698 0.000171317602253838 4.82598140660032e-06 0 0 2.9674880996493e-05 0.000411961624037244 0.000320371586519401 3.28823343797895e-11 4.65523378465607e-61 5.2986283150724e-25 0.000646645710518337 0.000426277831417106 0.000328819508326034 2.18718206990538e-19 1.96381373513561e-09 3.05241657344404e-05 XR_240462.1 RTKN2 PREDICTED: Bos taurus rhotekin 2 (RTKN2), transcript variant X2, 0.0 1810 100.00 0.308973172987974 NM_145307.3 RTKN2 Homo sapiens rhotekin 2 (RTKN2), transcript variant 1, mRNA. 0.0 3254 83.35 0.934628430465618 TCONS_00160264_1 sp|Q8IZC4|RTKN2_HUMAN RTKN2_HUMAN Rhotekin-2; 0.0 527 81.73 0.996688741721854 1 coding 0 1 1 1 0.0102518960843025 0.932820415279787 -0.000959149040665325 0.984727439217265 TTTATATTCAGTAAATAATTAATTATGGGCGTCAATCAATAGCTTTTTAAAAAAGATTCCATTAAGGGGAAAGAAAATTTGCATTTATACAGGGAAGTCCGTGTTCTGAGAACACAAATGGTAGGAGGTCTAATTCGTTGGAGAAGGTTGTACTGTGTTTTAAGAGGGGGTAAACTCTATTGTTTTTACACTCCAGAAGAAATTGAAGCTAAAGTGGAACCAGCTTTGATAGTGTCTATTAACAAGGAAACCAGAATTCGGGCAGTGGATAAGGATAAAACGAAAAGAATTAATAATTTCTCTGTCATCAACCCTGTTGCTGGACAGGCTGAAACTCATATATTTTCAGCTGACAATAGAGAAGATCTTCAGAAGTGGATGGAAGCCTTCTGGCAGCATTTCTTTGATCTTAGCCAATGGAAGCATTGTTGTGAAGAACTTATGAAAATTGAGATTATGTCACCACGGAAACCACCTTTGTTCTTGACAAAAGAGGCAACCTCAGTCTATCATGATATGAGCATTGATTCACCTATGAAACTTGAAAGTTTAACTGGTATAATACAAAAAAAAATTGAAGAGACAAATGGAGAGTTCCTAATTGGCCAGCATGAAGAAGCCTCATCTCCTTCTTGGGCCACACTGAAAAAGGTATTATCTCCTGCAAGCAAGCAGTTACATGAAGAGAAAGGGAAAAAGAGACGAGCTCCCCTTCCTCCTTCTGATAAAGTGCCATTCAACTTAAAAACACAGAGCAACAAAAATCAATTGGTTCAGGGCAACTGGGAAAAAACAAGTGTATCTCAGACCTCGCCTTTGGATACCAAACTGTCAACCCCAATGCATCACTTACAGAAACCGGTGGCTGCTCCTCGAAAACTTCTTCCTGCCAGGAAAAGTAGTTCAACTGATGGTGAACACACAGACACTAAAACCAGTATTGAAGCCAAGCCAGTACCAGCTCCAAGGCAGAAAACTATCAAAGACATTTTGGACCCTAGATCATGGTGGTGGACGCAAGTATAGAAAACCCTTAATGTGCAAAACATTTTACAAACCTATAACTGTGAAGCTTGATTCAGAAGCACTGTAGATATAGTGATATGAATTATGTAGGTAAATATGATAGTGACTTAAATCAATAATTAATAGGTATAAAATATTTTATAATTAGGAAATGGATTTCTCTTTTATAATTTTCAGAATTATTTCTCTAGCAGAGCATAAGAGGCAGTTTCTAGACAATATCTCAATTGTTGGAAGGGTTAATGTATTCCTAAATTAGTACTAGATGGTGAACAAGCACTAGGCAGAAGAAAGCATTAAAATTTCTTTGGGGAGAGATTGTCTAGTAATTTAAAATGTGTTAAATGAGAGCCATATTCTCATTGTGAGAATTTTAATCCTAATGGAATGTTTCAAAAGTTTCATTCAAACCACAAATTATAGAATCCACCCAAGAAGATTTCTTCTTAGCATTCTGGAATTCTCATCTAATAGTCCACTGGCTCTCATCTATTGTTTTACTCACTAGTTGACTGACCTTTCAAATTCCTGGGATAAATTTTGGAATATTAAATTCTTCATCTTTAAAGGGAATATGTAATGTGTTATTCAAAGTCGTTTCCTTGATGATCCCTGAAATGCTATTGACATTACCTTTCATATGTAAAGCAAAACATTTTTTAAGTTTAGGTAACAGGTAGATGAAATGTTCTTTACTTCCACTTTTCTATGCATGGTATTAATTTCCATTGTGACGTTGGCATTTGGGGAAATGAGTAGCTGTTAACACCTTAAAATTCATTTAATACTTATTTAAAAAGCAGATGACCTATTAAAAATACCAGAAAATTTGGCCGTGATAATTTCAGAATTAATCCTTCTAAAAATATTATTTAGATTTCCTTTTTCTAGCAGGGGTTTGTGTCTGCTATTGATATTTGTCATTAAAGTCATATTATTACAATAATGACATTGGAATCATTTCCATAGAGGTAATTTCCATAGCAACTAATCATAGTGACACAAACAGAATTATGAAATCAAGTGAGGAATAAATAGCAAAAGAATGAATACCTTAAAGGAACAAAAAAAACCTTTTTCTTAATAATTATGCTTCTTATAAATAAGAGCTGGACAGTTTTAAAAATCAGAATTTCCAAATAAAACAGTTTCCGTAAGCTGTCAGCAGCAGCACTAAAAATCTCAAATATCATTGTAAGAAATGAAAATATAAGAATTAAATTACTGCCTTGTATATAATCTCTAGAGATTTTTTAAAGCTCATAAGAACTCTATTTGAATCAGAATTATGTTATTACAAAGTAAAATGACTACTTCACAAAAAATAACATTAATTTAAATGGATCCCTTCATTATTTTTAGATAGCAGAGTCTTTTCTCATTTATGTAGCATGATGTAACTGCCAGGTTACTTTTGTGTTTGCCCAGGACTCCTAGTAAGAATTGGGACTCAAGGGAGTAGTGGTACAAAAGGTCTCTTGTGACTGGAGACACCAGGACAGACACAGCATTTGATGAGGAGGAAATCCTATATGCTTGCATGATAAAATTTAGAGACAATGAAAACCTAAAAAGGTACGATTCATTTGTTTTTTCTAACTAGAAGGCTGTCGTAAATCTCAGTTGTGATTGCCAATTCAGTAAATGACATATTAAAAACGTGAAGGATATTATTGTTTGAATTTTTATTTTTAAACCTCACTGCTGTTTTTGACAGCATTAATGACTCTTGTTGCCACTAAATTACTAAGCTAGAAGATGTGCAGGAAAAATTGTTTCTGAAACTGACATCTACGCATTCTTTTTTTGTTAAGTTAAAGCCTTCCTTAGAATAAACCAGTTTTAAAACTTCCAAATTATATTCTTGTTGTTTCTGCTTATGCATATTATTATCAAGAAGGATTCAAATGGTACAGAAACCAGAATTTGTTCTTAGAGAAATTACCTAGCAGTTGTGCCCTCAGTGGGCACTTTGAAATAAGGCTGAAGCCTTTCTTCCTAGAACCATTTAGATGAAGCCTGACCAAGGGCCATCTCCCCCAAAATTATTCAGACTGTTTCTGGGGTCCCATCTTTCTATATGTTACAAAGCCTTTAAAATCAGGTTGAAGTCTTAAGCTGTACTTCTGAGCTACTGCTCATTAAGTGTTAGTTCTTCCCACTCTCCATTCCCAGCAAAAGGTATGATACAAAGTTGGGGCTCCTTTCATCCCTCTC EMBV3_12707 AAACTATTTCTCTGACCCTGGACCTCAAGCTGTGCTGAAGCAATTCCAGGAGGAGTTGGC Gene GeneID:787450|ALOX12E:NM_001083532:192_cdna Constitutive 0 NULL GeneID:787450 19 GENE ALOX12E MGC143266 arachidonate lipoxygenase, epidermal EMBV3_43563 CGGTCGTAGAGTCGGACACGACTGAGCGACTGAACTGAAACAACACAGTTTTAAATAACA Gene BVT0102_080372 + 0 NULL GK000012.2:36453988-36493991 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00039541 1 XLOC_023358 NonCoding TCONS_00039541 XLOC_023358 NonCoding NonCoding - 12:36491687-36493663 - TSS29042 1976 1 TCONS_00039541_5 112 0.714574898785425 1 0 6.885476789821e-05 0.000915343915157192 4.21487218848449e-05 1.26075215731336e-05 3.49799867675065e-05 3.62050167360744e-06 8.85381337318625e-06 2.99328363928474e-06 2.39578180703052e-05 1.04111617300003e-05 0 6.03186587912302e-07 0 0 2.0111446238599e-05 0.000588112211339854 0.00067215642606374 0 8.70963976766272e-05 0 0.000104468760996573 3.75539826262149e-06 0.00010678296552795 0.000186650641701852 0.000161290520013226 0.000260283777520292 0.000207560319349432 0 9.82713675522394e-06 1.52132108775672e-05 XM_591154.5 TRMT44 PREDICTED: Bos taurus tRNA methyltransferase 44 homolog (S. cerevisiae) (TRMT44), mRNA. 6e-45 187 92.97 0.0642712550607287 0 noncoding TTCGGGGCTTTCTCTAGTTGCAGAGAGCAGGGCCTACTCCATGTTGAGGTGTGTGGGCTTCTCACTGCAGTGGCTTTTATTGTTGCAGAGCAAGGGCTCTAGGTGCTGGTGCTCAGTAGTTGTGACACATGGGCTTAGTTGTTCTGTAGCCTGTGGGAGCTTCCAGGACCAGGGATTGAACTGGAGCCCCTTGCATTACAAGGCAGATTCTTAATCACTGGACCACCAAGGAAGCCCTTCCCCCTTTTTTCATTTCTGATATTAATAATTTGTGTCTGCTCTCTTGTGCTCTCTCTCTTTTTCAAGACATTTATTCATTCAGCTGCACTAGGTCTTAGTTGCAGCACGTGGGACCTTTGATGTCTGTTGTGGTCCACAGGGTCTTCATTTGACCCTCGTGGGGTCTTTTAGTTGTGGCATACCGACTCTTAGTCGAGACATGTGGTATCTAGTTCCTTGACCAGGTATGGAACCCTGGCCCCCTGCATTGGGAGCTTGGCCTCTTAGCCACTGACCATTAGGGAAGTCCAATGTGTCTTCTTTTTTTCTTAGTTTGCCTGTTTGCTGTTGCTGCTGCTAAGTCACTTCAGTCCTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCTGCCCGTGGGATTTTCCAGGCAGGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTTGCCTGTTTAGAGGCTTATTAATTAAAGGCTTATTAATTTGGTTGAAATTTCAAAGAAACAGCTTTTAATTTCATTGATTTTTGTTTATTGACATCTTGTTTTCAATTTAATTTCTGCTCTGAGTCTTATTATTTCCCTTTTTATGCTTACTCTGTATTTAATTTGCTTTTCTTTTTCTTGTTTCCTTAGGTGGAAACTCAGCTGACTAATTAATGTTAGGTCTTCTTTTCCAGTCAATGAAGTCAGTGCTGTAAATTTCCCTCTAAGTACTACTTTCACTGTATCCCACAAATTTTGATAAATTGTATTTTCATTTTCATCTATTTCAAAGTATTTTTCAGTTTGAGACTTCTTCTTTGACTTGTGTTATTTAAAACTGTGTTGTTTCAGTTAAGTCGCTCAGTCGTGTCCGACTCTACGACCGGACCCCATGGACTACAGCAGGCCAGGCTTCTCTGTCCATCACCAACTCCCCAGAGCTTGCTCAACTGTGTTGTTTAGTCTTCATTTATTGAGATTTTCCAGCTATCTGTTATTTAATTCTAGGTTAATTCTATCATGGTCAAAGATCAGTCACTGTAGAATTTCTGTCCTTTTAATTTTGTTAAGGTGTGTTTGAGAACCTAGAACCGTCCTGGTGAATGATCCATGTGAGCTTGAGAAGAATATATATTCTACCATATATTGGATAAGACTTTTGATGTCATTATATACAGTTGAGTGATGGTGTTGAGTTCAACTATGTTCTTGTTGATCTTCTTTTTTAAAATTTTATTTATATGGTTGCATTGGGTCTTCCTGGTGCGTGGGGGCTTTCTCTAGTTGAGGCCGGGCCCAGGTGCGGAGCCGGCATCAGGCGCCGTCTCCGCCGCGGGGCCCAGCCCCGGCTTCCTGGGACCAGTCGGAGTTGTCCCCAGTTCCACCCGCGGCCCCGACAAGATGGAGGACGTCGTCTCCTCCAGCAGCCATGACGGGAGCGGGAGACGCCTCCCCACGGGGCTGAGGGGAAGGGAAGCGCTTCCAGCCTTCGGAGGGCGCGGGTCCCCGCTGCCGGCTTTCCAAACCCCTGCCCGCCCAGGTCTCCCGTGGCTCCCAGACACTGGACAGGGAGGGCGAATGGGACATCGAGGCCGCGGCGCTAGCAGCCGCTGCGAGGGCAAGTGGCCCAGTTCAGGTCTTCGGGCCGCTGCGGCCCAACAACCATTGGCCACTGCAGCTAGCACCAGACTGTATCTACACTGCGACGCGCCGGTCGGGGATCCAGGCGGAAAAGGCGG TCONS_00035238 . 5' 173 TCONS_00035238 . 5' 173 EMBV3_36746 CATGACATTTGACAAGAGAGGTGATGGGCTCTAGGACGTGACCACAGAAGACTCTGGCCA Gene BVT0102_227362 - 1 EMBV3_04300 GK000030.2:141087029-141098173 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42809 ACCAGTGACTTTGAGCCCGTCACCAACCCCAAATTCGATGACACTTTTGAGAAGAACCTC Gene GeneID:507204|NLK:XM_002695742:431_cdna UTR3_Alt 2 NULL GeneID:507204 19 GENE NLK NULL nemo-like kinase EMBV3_35083 CCGAGGCCCCCGGTGTACGGCGGCTGAGAGCAAAAGCAGACATGTGTCAGTTTAAATTCA Variant GeneID:519463|NEDD1:NM_001035333:1040_cdna 50^288 3 EMBV3_02355 GeneID:519463 5 GENE NEDD1 MGC128761 neural precursor cell expressed, developmentally down-regulated 1 EMBV3_16280 CGACTGAAGTGACTGAGCACGCACACACTGGGTTTTCCACACTTCTGGCTGTTTCTCAGT Gene BVT0102_100541 - 1 EMBV3_26260 GK000008.2:92762918-92773690 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26406 AATTGGGACAAACTTGGTTACAAATCACGATGAAAGCCACAGCCAGGTGGGGAGCCCACA Gene BVT0102_256404 - 1 EMBV3_28332 GK000009.2:78159575-78250166 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35371 ACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGG Gene BVT0102_104053 + 0 NULL GK000025.2:31380715-32388441 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38014 TTGTGCCAGCAAGCCTCACAGCTACTCTGCCCTTCTGCTTAAAAGAGGTGGCTCATTACT Gene GeneID:519294|LOC519294:XM_002685904:142_cdna Constitutive 0 NULL GeneID:519294 3 GENE LOC519294 NULL similar to olfactory receptor MOR123-1 EMBV3_35529 GGGATGACTGGTGGTACATGGGAGAAAGGTGTGAAAAGAGAGGGTCAACACGAGACACCA Gene GeneID:540701|MEP1B:NM_001144098:118_cdna Constitutive 2 NULL GeneID:540701 24 GENE MEP1B NULL meprin A, beta EMBV3_32412 AGGGCCCCGACAGCGTGATGACAAGAGAGGAACCATTATGCCCATCTTACTGGCAAGAAA Gene GeneID:539274|AKNA:XM_002689951:130_cdna Constitutive 0 NULL GeneID:539274 8 GENE AKNA NULL AT-hook transcription factor EMBV3_41314 GTATCTGTCTTCCCTCCAAGCATCGTCTAAGCAGGTTTACTCGGTTCCAAGATCGGGGGT Gene BVV0102_329770 + 0 NULL GK000013.2:80313159-80540675 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00050636 1 XLOC_030757 NonCoding TCONS_00050636 XLOC_030757 NonCoding NonCoding - 13:80536479-80538323 - TSS37812 1844 1 TCONS_00050636_2 106 0.044468546637744 1 0 0.000258241561476261 0.000359651124695247 0.000155571459980869 0.000157616601044511 3.74840530068121e-05 3.49170513967294e-05 0.000120176034491089 0.000795471209663008 0.00036797819847766 5.35509105163666e-05 8.93824576739205e-05 0.000213300148582162 7.78005509806199e-06 6.12233624807117e-05 1.59637978327423e-05 0.000630214564834422 0.000378142333535053 0 0.000174995696410344 0.00017939579443055 0.00018273646930964 0.000205235556555483 0.000129352100379093 0.00042729874483556 4.88450468856722e-05 0.000103160427544307 0.00025736978079703 6.7715494980851e-05 0.000213244469270747 6.19483270526476e-05 XM_001255069.3 LOC787809 PREDICTED: Bos taurus zinc finger protein 64 homolog (mouse)-like (LOC787809), mRNA. 0.0 2293 100.00 0.688720173535792 NM_199427.2 ZFP64 Homo sapiens ZFP64 zinc finger protein (ZFP64), transcript variant 0.0 1005 77.85 0.681127982646421 0 noncoding 0 0 0 0 -0.137799939112788 0.347663925508204 0.037966747945081 0.574877996107121 GCATCCCTGTTCCTAGTTTATCAAAAACAATGGATCTGCTCAGTGTTTCAAAGGCCCAGATATTGAGCCTGATGAGAGCACACAAGAATCTGTATTAAACAAAGACTGTATCTGAAGAAAAGAAGAAAGACACTTTGCATAAATTATATATCTGCTGGCATTCCAAGACCTCTTAAGTTTCCGTCAAGTTAAACGTCCATTTACAAGGGCTTGGGATTTCCCTTATTTGTTGGTTCAGCAAACATCAAGTGCTTACGATGATGAAAGACACTAGTCCCAGGCTTTTCCACGCATCGCCACGTCCCACAACGAAGCCCAGGACCCACTGGGCCCCTGCTCCCTTTTTATCAACAGATAGACAAATCTTGAATTTCACAACACAGTTACTGGCTGAGCTAGTGTTAGCTTGATCTCTGGCGCCACCTACAGATCAAACTGCATTTTGCTTCACTGCGGCACGAAGACGCTCAGGAATCCTAGGTGCCTTTACAGTGAAATTACCACCGGGTGGAGGGCCCTGGAGAAGCCCACAGTGATAGACCACAAAAATGGAGCGTCCCTCCGACACCATTCTACAGACGAGCTTGCCTTTTTATTATAAGACAACAGATAAAAGGAACCACACACAAAACATATAAGGCGGATTACTCTTAGGAACCACCACCCAGGTTAAGAAGTAGAACTTTTCCGGCCACCCCAGACCCTCCACATACCCCGACATCCCCTTAACCTGCTCTACGGATCAGTGTAGTGTTAGATTTTCAACGCGGTGTAATTCGTTTGTTTCGTAATCCCATCAGGGGCGATCAGTCTCAGAACTGGAATCCATCGTGAAGGAACTATCCCTATTGGATAGAGCAGTGCTCCGTGGACCCCCGATCTTGGAACCGAGTAAACCTGCTTAGACGATGCTTGGAGGGAAGACAGATACCCGGGGTGAGGTTGGGGGAGGCGTCTCCACAGGGCTGCCGTGGCGCCTGCCCTCACGCCACGGTGACTGCAGCCATGGCCTCTGCGAGCCTCAGGGTGGAAGCAGGCGTCCCCGGAGCGGGGGAGTCCAGCCTGGCTTGAGGGCTGGGCAGCGGCGTGGCGTCCGGAGATCCGGCCGGCTGACCACCCTCTCTGCGGGGGCTAGAGGCACTGGCTGGATTCCAGGGGCGCCTCGAGCTGCCCGACGGAGACCAGCGCGCCCAGCTGCCCGGGGGCGCTGCTCTCGGGCGGGAAGGTGACCAGGCCCGAGCTCTGGTTCTCACCGTGGTCGCTGTGCTGCTTCCGGTGGCACCGCAGAGAGTCGTCCCTGACGAAGGCCGCCCCGCACGTCTCGCAGCGGAAGGCCCTGTGCGTCACGATCTTGGCCACAGGCGGCCCGCCGCCCTCCCGCGGCCCCTCCCGGCCCGGCGGGGCCCGGTTCTCCGTTCGGGCCTCGTCCCGGTGCGCCTTGTCAATGTGCTTGGCCAGGCTGCTGGGCCGCTTGGTGTCGAAGCTGCAGAAGTCGCACTTGAAGGGCCGGTCGGGGCAGTGCACGCGGCTGTGCACGCGCAGGGCGGCCGCGCTGGAACACGAGTAGCTGCACTCGGGGCACTTCTCGGGGTGCTCGGCCTGGTGCAGCCGGCTGTGCTCCAGCAGGTCGGCCCGGTCCCGGCCCTGGAAGGCGCAGTGCAGGCACTTGAAAGTGTGCTTGATGCGGATGTGCGACTTCAGGTTCGCCTTCATGGTGCAGCGGACGTCACAGAACTCGCACTTGAAAGGCTTCTCCCCCGAGTGCACGATCATGTGCCTTTTCAAGTCCGAGCTGATTTTGAACTTGGCGCTACAGAGCCAGCACTGGAAGGGGGTGTCCCCTG TCONS_00046539 TCONS_00046540 . 3' 2353 TCONS_00046539 TCONS_00046540 . 3' 4196 EMBV3_37940 GTGTTTGACTTGTCCATCAATAAGTACGAGGCCATCTGCAACCAGCCCGTGGTGGCCAAA Gene GeneID:524709|DNAI1:NM_001038142:34_cdna Constitutive 0 NULL GeneID:524709 8 GENE DNAI1 MGC133918 dynein, axonemal, intermediate chain 1 EMBV3_00651 CAACTGGTCTGGCAGCTACTTCACCGAGACGGCAGGCACCTCGCTGCTGGTGACACAGAA Gene GeneID:613932|PLD3:NM_001078041:727_cdna Constitutive 0 NULL GeneID:613932 18 GENE PLD3 NULL phospholipase D family, member 3 EMBV3_25686 TCAAGTGACTGAAGATGCTGTGCGCCGCTACTTGACACGGAAGCCCATGACCACCAAGGA Gene GeneID:505702|GTF2F1:NM_001015527:33_cdna Constitutive 0 NULL GeneID:505702 7 GENE GTF2F1 NULL general transcription factor IIF, polypeptide 1, 74kDa EMBV3_20474 GGAAATTGTGGTTCCTGCGTACAAAGGGGTAACATTCACCCATGAAGGGAGTGTAGCACG Gene GeneID:514490|SGK196:NM_001098027:65_cdna Constitutive 0 NULL GeneID:514490 27 GENE SGK196 MGC151666 protein kinase-like protein SgK196 EMBV3_32108 TATGGATATACGTGTGTGTTAGTTGCTCAGTCGTGTCCGACTCTGTGACCCCACAAACTG Gene GeneID:100337296|LOC100337296:XM_002684655:6_cdna Constitutive 0 NULL GeneID:100337296 1 GENE LOC100337296 NULL leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2-like EMBV3_18597 GACAGCTTGCAGGTTATTAGTGGAAAGGGGAGATAGAGGAGAAGCTGAGTTGTCTTGGGC Gene BVT0102_042564 + 0 NULL GK000019.2:44708382-44742150 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24857 GTGTCCACACGGGGGAGAGACCCTACAAATGTGATGAGTGTGGGAAGAATTTCAGTCAGA Gene GeneID:525080|ZNF436:XM_002685713:406_cdna Constitutive 0 NULL GeneID:525080 2 GENE ZNF436 NULL zinc finger protein 436 EMBV3_15037 AGAGTCAGATCCCAATCCCTGGCCTTGGCCTGTTTCAGAGACCACCCAGCTTCGCGTGCA Gene BVT0102_262500 - 0 NULL GK000010.2:84834543-84870521 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018146 TCONS_00018160 TCONS_00018151 TCONS_00018147 TCONS_00018152 TCONS_00018156 TCONS_00018148 TCONS_00018150 TCONS_00018159 TCONS_00018155 TCONS_00018149 TCONS_00018154 1 XLOC_009195 Coding TCONS_00018151 XLOC_009195 Coding Coding ZFYVE1 10:84868463-84880646 j TSS12261 4826 1 TCONS_00018151_3 362 0.0414421881475342 9 0.604580528648826 0.0121436131654385 0.00678201684476616 0.00708105006485165 0.00254353800688618 0.00817178935022552 0.00158623933390959 0.000363853078362564 0.000109684368342588 0.00120072970891081 0.00129411577548299 2.88390031333375e-08 1.4854843757336e-09 5.41926777907529e-25 0.00300557978275015 0.00151587724122068 3.96732629687465e-15 0.000198473716415318 1.24975173009141e-47 0.000343995776309163 1.91547737314634e-07 0.00189999450756472 7.5012074368422e-25 3.28232977133029e-21 7.6816174168511e-20 0.00380076864119042 4.70805069631057e-08 0.00517788433957964 0.000299553134582476 0.000689693978517183 0.000446200678833731 XM_005212011.1 ZFYVE1 PREDICTED: Bos taurus zinc finger, FYVE domain containing 1 (ZFYVE1), transcript variant X1, mRNA. 0.0 4664 100.00 0.535640281806879 NM_001281735.1 ZFYVE1 Homo sapiens zinc finger, FYVE domain containing 1 (ZFYVE1), 0.0 2286 79.61 0.534811438043929 TCONS_00018151_3 sp|Q9HBF4|ZFYV1_HUMAN ZFYV1_HUMAN Zinc finger FYVE domain-containing protein 1; 0.0 751 97.24 0.997237569060773 1 coding 0 0 0 0 -1.65700368019144 0.00142250443674221 -1.02931747855262 0.00153065442917245 GGTTGGCGTGTGCGTGGGGCTTGGTGTGTGCGTGGGGCTTGGTGCTGGGGCACTTCATTGCAGAGGTCCTAGTTGAGTACTTGTTAAGACGTGTGCTGGACTGAGAGGAGGATCCAGAGGTAGTACGTGCCTTTCTTAGTGTTTGTGATCTAGTCTGGGAGATCAGATACATATATCAGGCTTACAGCTTTGCCTCATCACTTACTACCTGGTTCCGATGTTGAGGACAGGAGGTGCTCAGAGAAGGCAGAGTGTGATCTTCCCAGAGTGGTTGGGAAGGCAAGGCAGAGTGTGATCTTCCCAGAGTGGTTGGGAAGGCTGCATGGAAAAGGTGAGACCAAGGATAGGTCCTACTCAAAAGTAGGAGAGAGGAGGATGGTGTAGGCTTGACTCTGCTGGGTTTGCGTCTTGTTTATTCTCTTCAATATTCACATGTATATTCCCTTATAGTCTGTCTCCAAATCTTACTTGTTTTCCCTTAGTTACTTTTTACAAAATTACTACCAAGAGAAAAGGACGTATATGTATTAATCTTAGATTGTTTTTTTTGGTCCGAGTCAGAGATTGCCACTTGGTCAGCCGTCACTGGCAGGTGGTATTTTATGGGCATGTTCATTATCTTTGCAGGAGCTGAATTTGAATGCACATGGGTGAGTCCCACGCCCTTAGTCTGACACATTCTTTGCCACTACTCTTGTCTTGAACACCTGACCTGACTCAACATTGAGAGCTTGTGCTTTTGAAAACAGTTGGTTTACAACTCAGGGTATTAGGCTTCATTGGGAAAAAGGAAAAGGAGTTTTAATAAATAAGTGTCCTTAAGCGAAATTCTGTTTAGAACTTGAGAATCTTAGTTTAGAACCTAACCTGCCCCTTTTCTGAATCTCATCTTAAAATTTCTTTCACCTTTTTACTAAAGAAAGTAGCATCTTGTCCTTCTGTTTTAAAGCTACTTTTATATCTCTTCCCCTGAGTAGTGCCTGGCTGCCACAGAAAGAGTCGAGACTTAGGAACTGTGAATATTTAATAATTTTTAAAGCCTAGAAAGCCTATTTATATTTAATTCATATGACTTTTTTCACTGCGTATGACTGAAGGGTTGGAGGGGGGAAAAAAAAAATCAGCCTGAAGAATACTTTCAATATAAAGTAGTGAACACAAAGAGGATTAAAAATGGAAGCTTCCTTTAAACATAAAAATTTCAGTCTGTTACTTCACATACCTTTATCTTTCTTCTTGGCATTTATTTTGACCGTTTGCTGTCTTTTAGGTTAGTTACTATAGTTGATAAAAAGGCTGCCAATACCTAGAATAATTCCTCCTTGCGTTTTGGCTGATAACCCTTTTTTGTACATAGAGATAGTTCTGTGGCCAGTAAACTCCAGTGAGGGTCTGTGGTTAGAACTGGTGGAGACGCCCAGAAAACTCCCAGCGCACTTCTGAGCTCTGTCTCCCTCCGACTTCAAGACAAGCCACCTTCTCAAGCTCTGAGTGACCGCTTCAGTGGTGAGATCCCCGATGACCAGATGGCACACAGCTCCTTTTTTCCAGACGAGTACTTCACCTGCTCCTCCCTGTGTCTCAGCTGCGGGGCTGGATGTAAGAACAGCATGAATCACGGGAAAGAAGGGGTACCTCATGAAGCCAAGAGCCGCTGCAGATATTCCCACCAGTATGACAACCGGGTTTTCACCTGCAAGGCCTGCTACGAGAGAGGCAATGAAGTCAGCGTGGTGCCCAAGACGGCTGCTTCCACTGACTCCCCCTGGATGGGTCTTGCAAAATATGCCTGGTCTGGGTACGTGATCGAATGTCCCAACTGTGGCGTGGTCTATCGTAGCCGGCAGTACTGGTTTGGGAACCAAGATCCTGTGGATACGGTGGTGCGGACAGAGATTGTGCACGTGTGGCCTGGAACTGATGGATTTCTGAAGGACAACAACAACGCGGCCCAGCGCCTCTTGGACGGGATGAACTTCATGGCTCAGTCGGTGTCTGAGCTCAGCCTCGGGCCCACCAAGGCTGTGACGTCCTGGCTGACAGACCAGATCGCCCCTGCCTACTGGAGGCCCAACTCCCAGATCCTGAGCTGCAACAAATGTGCTACATCCTTTAAAGATAACGATACCAAGCATCACTGCCGGGCCTGTGGGGAGGGCTTCTGTGACAGCTGTTCATCCAAGACCCGGCCGGTGCCCGAGCGGGGCTGGGGCCCTGCGCCCGTGCGGGTGTGTGACAACTGCTATGAAGCCAGGAATTCCCAGTTAGATGTCACTGAGGCACAGGGGGACGACGAAGGTGGGACGCTGATCGCTCGGAAGGTGGGCGAGGCCGTGCAGAACACTTTAGGAGCCGTGGTGACAGCCATTGACATACCACTAGGTCTGGTGAAGGATGCAGCCAGGCCGGCCTACTGGGTCCCGGACCATGAGATCCTGCACTGCCACAGCTGCCGGAAGGAGTTCAGCGTCAAGCTCTCGAAACACCACTGCCGGGCCTGCGGACAGGGCTTCTGTGACGAGTGTTCCCACGACCGCCGGGCTGTCCCCTCGCGAGGCTGGGACCATCCTGTCCGAGTCTGCTTTAACTGCAATAAAAAGCCCGGTGACCTTTAACCCCAGCTCCCTCTCCGAGTCCTTCACAATTCCTTAGGTTCTCAGGGTTAGAAACGAGGTCGTGCTGAGGTAGGCCCTCCTCCTGGTCACCTGTGGCGGTGTGTGTCCTCTCTCCTCATCCCGGGGGCCCTGTTCCCACTGTGGGGTGGTGGGCGGGGGGGTGCAGAGAGTGAGTCGGGGCGAGCCGGGCGGCGGGCTCGAAGGCGTGAACCCCGCCAGGGCGGGCAGCCTGAGCAGCTTAGAGCAAAGGGGAATGAACTCGAATCCACTGCATTTTATTTCAGTTAAAAATAATAAGTACGTAAATATATACACACACACACACACACACACACACACACACACACGCACGCGTATATACATACAAAAGGAATGTGGAGGCGTTCACGCTGCCGCTGGCCGTGAACACCCGCGCAGTCCGTCCCCAGCAGGGATCCGGGGGCAGCGGGCAGCAGGTCTTCCCCCCACAAAACCGAGCCAAGTCCAAGGCCACTGCACCACTAGCCTCCCTCTGCTGCTTCTCTCCGAGCCTTCGAAGCCTTCATGCCCCTCGGCTGCCAGGGTAGGAGCTTCCCAGGGACCTTCTGCTGGGGGTGGCCTGCCGGGGAGCTCCCTGGGCCCTCCAGAGTCAGATCCCAATCCCTGGCCTTGGCCTGTTTCAGAGACCACCCAGCTTCACGTGCAGGTCACGGATGGGTGGAGGGTGTGGTAGGGTCCCCGGACCCAAGGAGTCCCCAAGCGCAGGTGACGTGATGTCCCTCGAGCGGGGGCGGGCACGGAAGGAGACGGGCCTTCCCCAGCAGTGTTCCCTGCTTGTCGATGCTTCCATTCGCTCCACCACTTGGCTTTCCCTGCCCCGCAGTGAGCACCTGCCCCCACCCTCCCCTCCCAGCCCCCGCAAGCCCCCCATCTACTGAGTGTTGCACTAGGGTTCTTGCTTATTTTGAAGTGTCTTAATTCTTTATTCCCAGACACACGACCCCTTGAGCTGTTGGAGGGGTGTTCATGAGAAATCTTCCAGGGAAAGAGCACAGAACGGACTGTTAGTGGTTTTTTCAAAGTATATACAAACATTTCAGCGGATCATTACGAAAAAATTCTCCAGTCCTGGCGAGAGAAGTCAGATGAACGTTTGTTTCTCAAGAGCTGGGACATCCATATCTGTCGTGACTGGAAAGAGACCGTTGTGCTGAAATCCTGTCATCATGGTGGATTTTATCGTCAATGGCCAAAAAGGAAGAATTCGAAGTGACACAGTTCTTGACTGAACTGGGGGGTGGGCCAAGCTTCAGGGAGGTACGTGGTGGTCACTTGGTGTCACTGACGTGAGCCCTGGAGACGTGTTGGTCCCTCTCAGACCTGCTTCCTTCCCGCCTCCCGTGGCCCAGTGACTGAGGCCTGCTCTAGTACTGTGTATTATTAAATTCGCCGTTATAAAGGAGTCTTCCTGCGGAATATGGACTGTGGCCTCTTTCCTTTAAGTTCATCAGTATTATCTTGCTACCTCTTTCTAGTTGATGAAAAGTGAAAGTGAAGTCACTCAGTCGTATCTGACTCTTTGCGACCCCATGGACTGAAGCCTACCAGGTTCCACCATCCATGGGATTTTCCAGGCAAGAATACTGGAGTGGTGGCCATTTCCTTCTCCAGATCTTCCCAACCCAGGGATTGAATCTGGGTCTCCCGCAGTGTAGGCAGACGCTTTACTGTCTGAGCCACCAGGGACGTCCCCTAGTTGATGAAAGCTGGTGGCTTTTCAGAGCAAAAGCCAAGTGAGAGGTATATTTTACCTGTGAATATCTCAGTTTATTCCCTGGGAATGCTCTCTCCCAGAAGAGATTAGGTGTTACTAGTGACCTATGGAAGCCCTGGGAAGAGACTCTTCTCCTTTTGTATCTGCCCTTTGGTGTCGATCCTCTGCCCTGCCTTGCTCTGTCTGTTCAGCTCCCGTTGAACAACTGTTCACCGTCTCCTGTCCTGTCGTGTGGGGCCGCCCCTGAGCATGGTGTCTGCTGGACCACACAGGAAAGATGCAGACAAGTCTTCCGAACTCGCTTTCTTACACTAGTCAGACCAGGAGAGGAGAAGAAGGTAACCCGGTATCAGAATAACCAAAAGTTCTCTCTTTTGTCCTACACACCCGGTGTTCATCTTGGTTTTGCGGTGGCTGCTTTAATTCAGATGAGGCCAAGAGTGCAGGTGGGTGGGTGG EMBV3_07126 ACTCCCCCTAGCTGAATAAGCAATTCAGATGTACAAGTCTTTGTGCCACAATCCTCCTGG Gene GeneID:505341|HCFC2:XM_002687642:807_cdna UTR3_Alt 2 NULL GeneID:505341 5 GENE HCFC2 NULL host cell factor C2 EMBV3_34412 AGTGTACATAAACCTGGACAAGGAAACGAAGACGGGGACGTGCGGCTACTGCGGCCTGCA Gene GeneID:327691|NDUFS6:NM_175810:14_cdna Constitutive 0 NULL GeneID:327691 20 GENE NDUFS6 IP13 NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) EMBV3_39615 CTTCTCTTACGGAAGCATTCTGCATGGCGATTGTGGAAGCAGCCAGTTGTGGTTTACAGG Gene GeneID:100139601|PIGA:XM_002700394:61_cdna Constitutive 0 NULL GeneID:100139601 X GENE PIGA NULL phosphatidylinositol glycan anchor biosynthesis, class A EMBV3_25423 CAGCTAAGCGTGGAGAATGTCCCCTGCATCGTCACCCTGTGCAAAATTGGCTATCGGCAC Gene BVT0102_268927 + 0 NULL GK000022.2:54797302-54836041 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129173 TCONS_00129179 TCONS_00129170 TCONS_00129171 TCONS_00129176 TCONS_00129180 TCONS_00129172 TCONS_00129177 TCONS_00129175 TCONS_00129178 TCONS_00129174 1 XLOC_078054 Coding TCONS_00129180 XLOC_078054 Coding Coding LOC100847343 22:54808940-54835963 = TSS96155 1033 1 TCONS_00129180_6 291 8 0.962067944637703 0.00823363169540404 0.00260724522024604 0.00584343551764325 0.00298055581906783 0.00194361238213216 0.00150957198745752 0.0033391244417204 0.00394989429236219 0.00441825290086665 0.00149397921571202 0.00143377384958168 0.0011555792612792 0.000143250885179063 0.000223132166268367 0.000180478321442689 0.0124330032394627 0.00525552740829557 4.65721486897436e-13 0.00303129647947081 0.00318935650124439 0.000993722632428342 0.00320449483545277 0.00286092878907191 0.00468145777095968 0.00391977912197688 0.00195745339901534 0.00171672614608624 0.0020263792407461 0.00105392864387514 0.00371605477723928 XM_003583828.2 EXOSC7 PREDICTED: Bos taurus exosome component 7 (EXOSC7), mRNA. 0.0 1860 100.00 0.997095837366893 NM_015004.3 EXOSC7 Homo sapiens exosome component 7 (EXOSC7), transcript variant 1, 0.0 1270 87.71 0.990319457889642 TCONS_00129180_6 sp|Q15024|EXOS7_HUMAN EXOS7_HUMAN Exosome complex component RRP42; 0.0 580 96.91 0.996563573883162 2 coding 1 1 1 1 -0.147311009202224 0.316868964189669 -0.099986395441583 0.348718525228942 GGAGGCTCGGCAGCATGGCGTCGGTGGCGCTGAGCGAGGCGGAGAAGGTGTACATTGTACATGGCGTTCAGGAAGACCTCCGTGTGGACGGCCGCGGCTGTGAAGACTACCGATGTGTCGAAGTGGAGACCGACGTGGTGTCCAACACCAGTGGGTCTGCCAGGGTCAAGCTGGGTCACACCGACATATTGGTGGGCGTGAAGGCAGAAATGGGGACACCGAAGCTGGAGAAACCAAACGAAGGTTACTTGGAGTTCTTTGTTGACTGTTCCGCCAGTGCTACCCCTGAATTTGAAGGTCGCGGAGGCGATGACCTTGGGACAGAGATTGCTAACACCCTGTACCGGATATTTAACAACAAGAGCAGCATCGACCTCAAGTCCCTGTGCATTAGCCCCCGGGAGCACTGCTGGGTTCTCTACGTGGACGTGCTGCTGCTGGAATGTGGTGGGAATTTGTTCGATGCCATCTCCGTAGCTGTGAAGGCTGCGCTCTTCAACACCAGGATACCAAGAGTTCGTGTCCTGGAAGACGAAGAAGGGTCGAAGGACATTGAACTGTCCGATGACCCCTACGACTGCATCCAGCTAAGCGTGGAGAATGTCCCCTGCATCGTCACCCTGTGCAAAATTGGCTATCGGCACGTGGTGGACGCTACTCTTCAGGAGGAGGCCTGCTCCTTGGCCAGTTTGCTGGTGTCCGTGACCAGCAAGGGAGTCGTGACGTGCATTAGGAAGGTGGGAAAGGGCAGCCTGGACCCAGAGAGCATCTTCGAGATGCTGGAGACTGGCAAGCGCGTGGGCAAGGTGCTGCATGCCTCCCTGCAGAGTATTCTACACAAGGAGGAGAGCCTGGGGCCCAAGAGACAGAAAGTCGGATTCCTGGGCTGATGTGCACAGCAGCCTCCAACTGCCGAACGTTCGTCTTCTCCTTTTCCCTGGAAGCTGAAGTTTGTATACATTGTTTTCTTAACTGCTGTGAATTTAAGGCAACATTTGTACATGTAAAATTAAAGTCTATTTTCTGGTCTCGT EMBV3_23890 GGCCCAGGGTAGAGAGGGAGAAATCCCTTTATTTAATGGTCTGCGCTTCTGGAACTTAGC Gene BVV0102_157375 + 1 EMBV3_21530 GK000002.2:24194816-24489073 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02524 GCTCCAAGGCCCACGTCGATGTAATAGTTGATCTTCGGCATAAAACAACAAGCCCAGAAG Gene BVT0102_050750 + 0 NULL GK000024.2:25591728-25770342 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138684 TCONS_00138679 TCONS_00138681 TCONS_00138686 TCONS_00138682 TCONS_00138683 TCONS_00138680 TCONS_00138685 1 XLOC_084708 Coding TCONS_00138686 XLOC_084708 Coding Coding TRAPPC8 24:25613746-25653090 j TSS103874 3363 1 TCONS_00138686_5 566 18 0.914978522227588 0.00406195785851719 0.00275212804012013 0.0028289846517532 0.00261026419362196 0.0013469156245851 0.000108855679689668 0.00213476982338651 0.00337263112524208 0.00186008518226682 0.000734381134182069 0.000641431672546906 0.00078619676009622 0.000249065510467662 0.00103380206074841 0.0007258060824629 0.011090242905145 0.00390864685715897 0.00341165181373529 0.00931481842209539 0.00770996605211776 0.00267362434040376 0.00594887362723541 0.00304178636967163 0.00699228428354075 0.00519167791759673 0.00637136690371929 0.00286112359882613 0.00117979803836535 0.000354663062760926 0.00194842590201389 XM_003587764.2 TRAPPC8 PREDICTED: Bos taurus trafficking protein particle complex 8 (TRAPPC8), mRNA. 0.0 5986 99.00 0.9988105857865 NM_014939.3 TRAPPC8 Homo sapiens trafficking protein particle complex 8 (TRAPPC8), 0.0 4572 89.85 0.999702646446625 TCONS_00138686_5 sp|Q9Y2L5|TPPC8_HUMAN TPPC8_HUMAN Trafficking protein particle complex subunit 8; 0.0 1106 93.46 0.998233215547703 1 coding 0 0 1 0 0.11254736035692 0.627995873671994 -0.02707730253637 0.604805276564838 CAGAAAAACATGCTTTACGCTGCTATTGTCAAGCCATGCAAGTTTACAAAGGAAAAGGCTGGTCTCTTGCAGAGGATCATATTAACTTCACCATTGGGCGACAGTCCTACACTCTCAGGCAATTGGACAATGCTGTGTCTGCTTTCAGGCATATTTTAATCAATGAAAGTAAACAATCTGCTGCTCAACAAGGGGCCTTCCTCAGAGAATATCTTTATGTTTACAAGAATGTAAGTCAACTCTCACCAGATGGCCCTTTACCGCAGCTTCCTTTACCATATATTAACAGTTCAGCAACCCGAGTTTTCTTTGGCCATGACAGACGACCAGCAGATGGTGAAAAGCAAGCAGCTACTCATGTAAGTCTTGATCAAGAATATGACTCTGAATCCTCTCAGCAGTGGCGAGAGCTTGAGGAACAAGTGGTGTCTGTGGTCAACAGAGGAGTCCTTCCATCCAACTTCCATCCCACACAGTATTGTTTGAACAGTTATTCAGATAACTCAAGGTTTCCCCTTGCAGTTGTGGAAGAACCAATAACAGTGGAAGTGGCTTTTAGAAATCCTTTGAAAGTTCCACTTTTGTTGACTGATTTGTCATTGCTCTGGAAGTTTCAACCTAAATATGTCAGTGGAAAGGATAATGAAGAAGTTAAAGAACTAGTAAAAGGTGAACCTGAAATGATTGGAACTGAAGTTATTTCAGAATTCTTAATTAATAGTGAAGAATCTAAAGTGGGGAGCTGCATATTCTGGGAGTTGTGTATAACCTTGGTACCATTCAGGGCTCTGTGGCAGTAGATGGCATTGGTGCTCTTCCTGGATGTCACACAGGAAAACATTCCTTGAGTATGTCAGTCCGAGGGAGACAGGATTTAGAAATTCAAGGTCCTCGACTTAACAACACAAAAGAAGAGAAAACGTCTATTAAATATGGTCCTGATCGACGTCTAGATCCCATAATTACTGAGGAAATGCCACTATTGGAGGTGTTCTTTATACATTTTCCTACAGGGCTCCTCTGTGGAGAAATCCGAAAAGCCTATGTAGAATTTGTCAATGTCAGCAAATGTCCTCTTACTGGATTGAAGGTTGTTTCTAAACGTCCAGAGTTCTTTACCTTTGGTGGTAACACAGCTGTTCTAACACCGCTGAGTCCCTCGGCTTCCGAGAACTGTAGTGCTTACAAGACTGTTGTGACAGATTCTACCTCTGTGTGTACAGCACTCGTATCATCAGCTTCGTCTGTGGACTTTGGCATCGGCATAGGAAGTCAGCCAGAGGTGATTTCTGTTCCCCTTCCTGACACTGTTCTTCTACCTGGAGCTTCAGTTCAGCTACCAATGTGGTTACGTGGGCCAGATGAAGAAGGTGTCCATGAAATTAACTTTTTGTTTTACTATGAAAGTGTTAAAAAGCAGCCTAAAATACGTCACAGAATATTAAGACATACTGCAGTCATTTGTACCAGCCGATCTTTGAATGTGCGAGCCACTGTCTGCAGAAGTAATTCTCTTGAAGATGAGGAGGGCAGAGGAGGCAATATGCTAGTCTTTGTGGATGTGGAAAATACCAATACGAGTGAAGCAGGTGTGAAGGAATTCCATATAGTACAAGTATCAAGTAGTAGTAGACACTGGAAGTTACAGAAGTCTGTAAATCTCTCTGAAAACAAAGACGCCAAACTTGCCAGTAGGGAGAAGGGAAAGTTTTGTTTCAAGGCAACACAATGTAAGGAAGAAGAAGTTGTTACGGAGGTCTCAGAAAAATACACCTTTGCAGATATCATCTTTGGAAATGAACAGATAGTAAGTTCAGCAAGCCCATGTGCAGACTTCTTCTATAGGAGTTTATCCTCTGAATTGAAGAAACCACAAGCCCAGTCTTCGGTGCATACAGGAAAACAGTCAGTAGAGGATGTTACGAAATTAATCCAGAAGTGCAATGAGGTGGATTTGAATATTGTGGTGTTGTGGAAGGCTTATGTAGTGGAAGACAGTAAGCAGCTTATTTTGGAAGGTCAGCACCATGTTGTTCTTCGCACTATAGGAAAAGAAGCTTTTTCATATCCTCAGAAACAGGAGCCACCAGAAATGGAACTATTAAAATTTTTCAGGCCAGAAAACACTACAGTTTCCTCAAGACCATCAGCAGAGCAGCTTTCTAATCTTATTAAAACGAGTCTTCACTATCCAGAATCATTTAATCATCCCTTTCGTCAAAAAAGCCTTTGTTTAGTACCAGTGACCCTTTTACTTTCCAATTGCTCCAAGGCCCACGTCGATGTAATAGTTGATCTTCGGCATAAAACAACAAGCCCAGAAGCTTTGGAAATCCATGGATCATTTACATGGCTGGGACAAACACAGTATAAACTTCAGCTTAAAAGCCAGGAGATTCACAGTTTGCAGCTGAAAGCATGCTTTGTCCACACGGGTGTTTATAACCTTGGAACTCCTAGGGTATTTGCCAAGTTATCGGACCAAGTCACGGTGTTTGAAACAAGTCAGCAGAGCTCCATGCCTGCCCTGATCATCATCAATAATGTGTGACACCTTACAGATTTGTACTGAAATGCACAAGAATCAGTTTTATTTTACTGGATGGGTTTTACAGCAGTATTTGAAATGCCTAACTTGTTCGGGAGGTTGGTGTCGGATCACTGCAGAATACTTTTGGTTTGTCTATTTGTTGATGATGCAAAGCACGTTGGACTGAGAATACTTAAATTCTTTTTTTGTATTTCTTTAAACCCTGGTAATAATTTACACGCTCATAATACAGAATTCAGCATATCCATGCACCTTATTAAGCCCCATCTTAAAACCAGTGTCTAAGTCTGCTGTTACAACTTACTGATGGTATATGAACATTAGGAGAGGATTTGAAGGAAGAAAAGGCCTTGTTGGCAATACTCCTTTTAAGCCATTAGTCTATAAATTCCAGCTTTACTGTGAAGTTCTATAGAGTGTCAAATACACGGTTTCTTGTCTTACTTCACACAATTCTCTAAAATCAGTTTTGAACTTTGGTTATGAGTCTTCATACTTCAGTATCTGGTCGTTCCTATGGCTTATACATAACTTTGTAAAAAGAAAAAAATTTTTTTCTGATGCTTTGAATATAGTTTTGAAAGGAGTTGACTTCCCCCCCTCTCATTCATCTCAGCATAGAGTGCACTATTTCACAATATGAGATTTTTGTCATTTAAATTATCATATTCTTTATTATGTAACTTTAACAATTGAGTTGATCTGTTTAAAATATAAATCTACTCAAGTTAATTAAAAATAAGCTTTTCAAAAATGTATTATATTTATAACAAATGTACTGTAAATAGAATAAAGACATGCTATTCACTGTA EMBV3_03281 GATTGCCCTGTTCTATGGAGTCGTCACACCGATGCTCAATCCTATCATCTATAGCCTGAG Gene GeneID:789812|LOC789812:XM_002689892:49_cdna Constitutive 0 NULL GeneID:789812 8 GENE LOC789812 NULL similar to olfactory receptor Olr853 EMBV3_19226 GTGCCAAGTGTATAGCGACACAGCCTGCCTCTACCACAGGAATTACGGCCCTATCTGAGT Gene BVT0102_359111 + 0 NULL GK000006.2:2653194-3373056 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01212 AGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGACTCGACACCTGGACATTAAA Gene GeneID:100336730|LOC100336730:XM_002685968:271_cdna Constitutive 1 NULL GeneID:100336730 3 GENE LOC100336730 NULL myocyte enhancer factor 2D-like EMBV3_31470 ATCTGATGCGGAATCACCTGACGGAGAAGAGGGCACTCCGCCTGGAATGGATGATTGTCA Gene GeneID:534105|RMND1:NM_001102164:5_cdna UTR3_Alt 2 NULL GeneID:534105 9 GENE RMND1 MGC159836 required for meiotic nuclear division 1 homolog (S. cerevisiae) EMBV3_07431 AGGGAGTGTCAACGACGTGGCCCTGGATGCCTTAGACTTGGACCGGATGAAACAGGAGAT Gene GeneID:506201|EVL:XM_002696836:653_cdna UTR3_Alt 2 NULL GeneID:506201 21 GENE EVL NULL Enah/Vasp-like EMBV3_28144 AGAAGTGGTTTTCAGAAGTCCACATTTGAGAACGGCCGCTTTGTGGGCGATGCTGACCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22222 TAGTTGAATAATGAGGGGACTGGGTATTTCTGCTACCCCTCCCGGGTTCCAAGATCCATG Gene GeneID:539674|TNFAIP1:XM_002695743:434_cdna Constitutive 0 NULL GeneID:539674 19 GENE TNFAIP1 NULL tumor necrosis factor, alpha-induced protein 1 (endothelial) EMBV3_29001 GCACTGGAGCTATACTGACATCACTGATGGGATGCTTTTTTGAAAATCATTCGAAATGAG Variant GeneID:613948|SLC25A40:NM_001076299:38_cdna 417^583 1 EMBV3_01957 GeneID:613948 4 GENE SLC25A40 MGC142474 solute carrier family 25, member 40 EMBV3_03459 TACCACAAACATCCAAATACGGCTTGCTGACGGCGGGAGGCTGGTGCAGAAGTTTAACCA Gene GeneID:526612|NSFL1C:NM_001034557:1162_cdna Constitutive 2 NULL GeneID:526612 13 GENE NSFL1C MGC128316 NSFL1 (p97) cofactor (p47) EMBV3_17254 ACATGAAGATGTTAGGGACTGGGCTTGTATGTCATGGGGTACAGTCTGAAGATGGGGCCC Gene BVV0102_066472 - 0 NULL GK000002.2:126469343-126478727 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103801 TCONS_00103798 TCONS_00103800 TCONS_00103802 1 XLOC_062215 Coding TCONS_00103800 XLOC_062215 Coding Coding WASF2 2:126399311-126470656 j TSS77007 4856 1 TCONS_00103800_1 279 0.0201812191103789 8 0.932047544292442 0.00263990386770969 0.000613181938342366 0.00100957808797442 1.73371952699851e-12 0.00119689081431102 0.00138802601868804 1.44361686590431e-09 0.0013999423247058 0.000581230230915723 0.00108540553186724 0.000859726093456287 0.000415353099853888 8.04894889611031e-13 3.60791849469225e-05 1.34594525249625e-14 0.00525775279656534 6.38352574438891e-13 8.18594920916330e-11 0.00151719340153736 0.00450392107055907 0.000870352672686342 2.11310095300639e-15 0.00199466023357195 0.00358176004707881 0.00256604061809434 0.00223232361753416 0.00115005330974796 0.000396290800816462 6.58722267136733e-11 1.09222032501455e-06 XM_005203087.1 WASF2 PREDICTED: Bos taurus WAS protein family, member 2 (WASF2), 0.0 7005 100.00 0.799629324546952 NM_001201404.1 WASF2 Homo sapiens WAS protein family, member 2 (WASF2), transcript 0.0 2919 82.58 0.577841845140033 TCONS_00103800_1 sp|A2VDK6|WASF2_BOVIN WASF2_BOVIN Wiskott-Aldrich syndrome protein family member 2; 0.0 565 98.91 0.985663082437276 0 coding 1 1 1 1 -0.126049058049301 0.503634220791101 -0.0338750149545242 0.471546418189068 GGGGTCCGGCTGTGTGGCAACCCGAGAGGTGGCCGGAGAGAGCAGACCCTGTGCGGAGAAGGGCGGCTGGCCAGCCCTTCTGACGCTAAGGGAGACCGCGCGAGACCAGGTTGTTTTTCATCATTCAGAACATTGCCTGAAGCAGGTCCACCATGCCGTTAGTAACGAGGAACATCGAGCCAAGGCACCTGTGCCGTCAGACGTTGCCTAGCGTTAGAAGCGAGCTGGAATGCATGACCAACATCACCCTGGCAAATGTCATCCGACAGCTGGGCAGCCTGAGTAAATATGCCGAGGACATTTTTGGAGAGCTCTTTACTCAGGCAAATACTTTTGCCTCTCGGGTAAGCTCCCTTGCTGAGAGGGTCGACCGCCTACAAGTTAAAGTCACTCAGCTGGATCCCAAGGAAGAAGAAGTATCACTACAAGGAATCAACACCCGAAAGGCCTTCAGAAGCTCTACTGTTCAAGACCAGAAGCTCTTTGACAGAAACTCTCTCCCCATACCTGTTTTGGAAACATACAACACCTGTGATACTCCTCCACCTCTCAACAACCTTACCCCTTACAGGGACGATGGGAAAGAGGCACTCAAATTCTACACAGACCCTTCGTACTTCTTTGATCTTTGGAAGGAGAAGATGCTGCAGGACACCAAGGATATCATGAAAGAGAAGAGGAAGCATAGGAAAGAAAAGAAAGATAATCCAAATCGAGGAAATGTAAACCCACGTAAAATCAAGACACGTAAGGAAGAGTGGGAGAAAATGAAGATGGGTCAAGAATTTGTGGAATCCAAAGAAAAGCCTTCTCGGTATCCACCCACCTTGGTGTACCAGAATGGCAGCATTGGCTCTGTTGAGAATGTGGATGCAGGCAACTATCCACCACCACCACAGTCAGACTCCATTTCTCCACCTTCTCCTTCCTTCTCTGAGGACAACTTGCCTCCCCCACCAGCAGAATTCAGGCTTTCAGCTGCGCAGGGTTGAGGAGCAGCGGGAACAAGAGAAGCGGGATGTTGTGGGCAACGACGTGGCCACCATCCTGTCGCGTCGCATTGCTGTGGAGTACAGCGATTCGGAAGACGACTCCTCTGAGTTTGATGAAGACGAATGGTCGGATTAACTCTTCTGCCTGCCGCCTACTTCCTTTTTCTTTCTTTCCTACCTGCCTTCTTTGATGCCTACCCCAACAGTCCCAAGGGGAAGAAAAGGGAGGAAAAAAAGAATTTCAAGGGGCCAGAGCCTTCCCTGAAGCAACCAAAGATATATCCCAAGTCCTTCCTCCAAATCACCATGTATTTCCCGTCTCCCTGAGGTCAGGCCCCATGGGGCTGCTGAGGTTCAGTACCTGGGATATTCCCTGTTCCCTTCAAGTGAATGTTGCCAACTGAAGAGAAGGGAAGACCCCAAAGCACACTCCTTTGATTGGGTTTAAATTGGAATGGTGCCTTCCCCCAGGAGCCATTTTCTGTAGTCTTCCAGAATCCTTGTCCTCAGCTGCTTTGCATAGTGCCAGCCATCTTCTGGTCCTGAAGCCTGCTGGCCCTTTTCCCGTGCATCGAGAGGGCGGAGCAGCCGCAGGCCCGGTGCCTCACCCTTCTGTCCTCATCCACAGGGTGAGGCTGCCTTTTTCTAAGCCATCTCTGTTTCTAGATGCCCTTTATTCCAGGAGCCATCAGGCCCCTAAAGAAATGTCTTACCCTCTCTGCTCAGAAACAGTGCCTTTATGAAGGCAGGGGTGGTTGCCTCCCTCCCAGGCTTCCTTCCCTGACTGTGCTGTTCCTGTGTCCCTCAAATACCCCTCCCTTGCCACCAGGTGCCTCCAAGCACCACAGCCCGGTTCTAACCTCTAGACCCCATGACCAAACTAGCCCTGACACCCAGGGATCTGAGCCTCTGCTGCAGTTAGGAGCCGAGCAGAGACTTGGAGCTGCAGGACTGGAAGAAGACGGAAGTCTTTGGGTTGAATGACGCTGAAGCCTGGAAATGGGAAGTGACTTGCTCACGGTCACACCATTGGATGGGGACAGAGCTCGAGCCCAGAGTTCCTGATTCCGAGTCCCCTGTGCTTTATGGGACCAAATTGTGGGCACCTGCTAGATTCTGGGCTCTGCGCTGCTCCAGACCTCCGCGCAGAGGGGAGTCCCAGCAACAGGGCTCAGGGCCTGCGCCAGGCCTGTCCGTACTGCTCAGACCCTCGTGGCTGCTCTTGTCGTTTGCCCCCGCTTTCCTGTCACCAGCCCAGCACCTGGCCTTGAGAGCTGCTCTTTTGGGGGACCAGAGTAGTGAGAGGAGGAAGAGGGTAGGCAGTGTGACAGGTGCTGCTTTCAATTCCTCTGCATCTCCTCCCCCGTTTGTTTCCCCAGTTTAAGCATAGGTCCTGCCAACTGTAGAAACTTCAGTCCCTCAGGCTGGCAGCGGCCGCAGGTAGTGCCTGGGGAGGTGGGGTGGGGAGGCCTGGCAGCTGTGAGGAGGGCTGAGACGCAGGACGTCTCTGGGTCCTGTTTCCAGCTCCCCTCCTCACTGTACCATGATGTTCCCTCCCTCCCTCCTCCCTTTTTCCCCAAGCTAATACACAGGTGCTATTCTTGAGGAAAAAAAGCTGGTCAGCTTTGGCCAGCAGTGAGGTTTCTTCTGTTGTGTAGCCTCTTAGGCTGAAACCGGCTTTTCCTGGCTTCTCCAGCTCTCCGAGCCCTGAAACAAAGACAAACAGGATCTGTCTCCCCCCAGCACAGCACATGGTTCTAGTAATTGCCAAAGCCCTCATCAGCCCCTCCAGCTCGAGGAGAGCGTGCAGTCATGAGGACGGAGCCGTTAAGAGGCCAGTGTGCCCGCCTGTCTCCCCAGATAGGGCGTCTTGGGCGCAGGGCGGGCACCGGGCTCCAGCGCTGAGAACCAGAACGTGTGCACCCCTGCCGTGCCTCCCACAGTGTGCTCCAGAAGCTGAAGGTGCTTTCTTCAGAACTCTAAAATGGCTGTTGAAGGTGCCCCCAGCTGTCGCCCAGCAGTGACCAGGGCAGCAGGCAGAGGGCAGCGGTTCTCCCAAATAGGAGTCTTGGGGCCTGGCCAGGCCAGGCCAGGGTTTGGGCCTAATGGCTTTGACTGAATCACCCCCATCCCCCTCCTTTCTGGAAAAGGGGGAGCCAGCACTGTGCTCGTATCATCCTGCTCTGACCTTGAAGGGGGCGGTGTTGGCCTGGCTTCTGGAATGGACAGAGCCTGCCGTGGAAGAGGGCTGGGGGCAGGAGGAGGTGGGGAGGGGCACTGCCTGCGGAAGGTAGGATTAGATCATTAGCTCAGTGACCTCCTAGGGTTTCGATGTGCTGTGTTCTCATCCTACAGCTGGTTTGGTAATGATCTGCAAGTCCCGGAGAGCAACAGCACAGCTCTGCCTGACGCTCTCATTAAAATCTATGCAGCCAAGCTCGGCGCTTTGTAGCAGCCGGCCTTGCGAAGCTTCCTCAGCTCGGGGGGCTGGGGACCCAGTCAGCCGAGAGGCCCTCTGGGCTCTACTTATGCATATGTGCACCAAAAAAAGAAAAAGCTTCTTTAAACCCAGAGCCCTTTAAGATGATAAAGGACCTTGTGCAGGTAATTGTGTGTCTTTGGAATCCTGTAATTGTAGAAAGCCAAGTTTAGTGATTATTTAAACTGGGCTGAGGCTGGTGAGGGTGTGGAGCAATGGCCCCTAAGGACTCTGAGGGCTGAAGGCAAGGAGCCGCCTCCCTTCCCTGTTCTGCCCAGCCCAGGGGACCTGCCCCCATTCCTGTGGCCCAGGGGCCCAGCTTCCAGTTCGGCAGTGTCAGAAGTGACTTGTGGCTCTGCCTTGGTTGTGAGATGAGTACATTCCAAAGGAGCAGCCACGGGGAGGGGGCAGGCTCAGCGATCCCTTGGAGGCTCAGAGCAGCTGGCCTGAGCTCCAGCTCGCGTCCAACGGAAGCTCGCGCCCCTCAGAAACGACCCTGGCCAATGTCACCGCAGAGCCGAGGCGGTGTTGTCAGGGCTAATGTGAAATCTCTTCCCGTGGCGCCGATCCTCCGGCTCTGCAGCGCCAGCTCGGACAGATTGAGGTCTCTGTGGCTTTGGTGACCCTGCTTAAGCATTCCCACCGTGTCCCAGCTCTGCTCTCTGCCTGCCTCCCACTGCAGCCCCCCCCTCACCTGGCTTGGGGAGGGGGGCAGTGCCCCAAGGCTAGGGGCTTTTGCTCAGGAGAGATGTCAGGCTTTCTGGGGTCGTCAGGCTTTGAGCTCTACCGGGGTCCAGCTGACCTGGGATACCAGGTGTGCCCAGAGATGCACCTCATCCCGTGCCTCAGGAAGGGCTAGGGAGCAATTTTGTTATTGTATTAACTTTACTCAGTTAACTCACTTGAGAAACTAACCAATTTTTACTTTCTGTCTAGAATGATGTATGTGTAGGAGAGTGAGCTGTAATGCTCCCAAAGTGCCTTGTTTTCTCTGATATAAATATATTTATAAGGACCTGGTCTGGTGGATTATTCTTGGGTGTGTTTGCCACATGAAGATGTTAGGGACTGGGCTTGTATGTCATGGGGTACAGTCTGAAGATGGGGCCCCTTCCCCTGAAGATGGGACAGGAGCTGCAACTGAGATCTGAGCAGTGGGGCTGAGCCAGACCCCTGAAGTGACCCTTTCCTCTTTCCCCTGCTCCTCTCAGGTCCTTAGAAAAGGACATCCAGTTTTTCAAAGCCCTGTGCCTCCAGGCCTGGTCTCACTTGAGTCCCTGCCAGGTTTCATGTGTGTAGCACGTTAGCACACCAAGTGACCTGAAGATTCTATGTAACTTTTAATGTATACTTCCGAATACATAAATGCCAACATTTTAAATAAT EMBV3_26915 GTGAAAGTAATGTTATGGGTTTGCTGGGAGGATTGACTTACAGCATTTGCCTGCGTCCCG Gene BVV0102_273769 - 1 EMBV3_03585 GK000007.2:46027019-46035047 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10717 AGCTGAGAGAGGGTGAAAATTCAGTGGAGATGGCTTCTCAGAAGGAAACCATGCAGGAGG Gene GeneID:539759|SIGLEC1:XM_002692384:293_cdna Constitutive 0 NULL GeneID:539759 13 GENE SIGLEC1 NULL sialic acid binding Ig-like lectin 1, sialoadhesin EMBV3_37574 CAGAATTGTGACCCCATCACTATCCCCATGCGTGTAACAGCTCTTTTCCTTTTCACTCTC Gene GeneID:518781|VPS18:NM_001100380:160_cdna Constitutive 0 NULL GeneID:518781 10 GENE VPS18 NULL vacuolar protein sorting 18 homolog (S. cerevisiae) EMBV3_40533 GGAATCTGGGGCATCTTGCCTTTCCCCAAAAGAGAGTGAACAGATGTCAGTAACACCCCA Gene GeneID:507498|CKAP2L:NM_001098901:53_cdna UTR3_Alt 2 NULL GeneID:507498 11 GENE CKAP2L FLJ40629 cytoskeleton associated protein 2-like EMBV3_19970 CTGACAGTGTAATTTATGTGGGCATGGTCTTCAGCTTCCCCTACTGTGGCTCTCTCCAGG Gene GeneID:530231|LOC530231:XM_002689048:9_cdna Constitutive 0 NULL GeneID:530231 7 GENE LOC530231 NULL similar to olfactory receptor 1394 EMBV3_42420 ACATGGACCCAAATGTGTGACATAAGAGATGTGTTTTGCTGCTCAACGCTGTCCTCACGG Variant GeneID:511381|UNG:NM_001075513:132_cdna 534^720 2 EMBV3_40303 GeneID:511381 17 GENE UNG MGC140717 uracil-DNA glycosylase EMBV3_03902 TGTTCAAACTGAGGTCACACATTTATAGTGTTATCCTGGCAAATACTCCTGCAGGCCAGG Gene GeneID:536186|CRISPLD1:NM_001101165:52_cdna UTR3_Alt 2 NULL GeneID:536186 14 GENE CRISPLD1 NULL cysteine-rich secretory protein LCCL domain containing 1 EMBV3_16162 CAGAAGCACAGAGTCTTGACCACTGGACTGCCAGGGAAGGCCCTGCATCAACTTCTTTAA Gene BVV0102_044526 + 0 NULL GK000002.2:97503980-97843886 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08432 CAGACAGACTTGCAGGGCTTTAACTTCTTATTTCTGTTGTCAGAAGCTCGTGTTGGCATA Gene GeneID:538551|EBAG9:NM_001078015:38_cdna UTR3_Alt 2 NULL GeneID:538551 14 GENE EBAG9 NULL estrogen receptor binding site associated, antigen, 9 EMBV3_43457 GAGGAGTGGGGGTCTCTCATGCTCTGTTGAAGAGGGGTAGCTTTCCTCTGGTAGTAAGAT Gene BVV0102_158466 + 0 NULL GK000028.2:27648568-27679908 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160454 TCONS_00160456 TCONS_00160455 1 XLOC_097664 Coding TCONS_00160456 XLOC_097664 Coding Coding SLC29A3 28:27677805-27686771 j TSS119994 3748 1 TCONS_00160456_2 268 3 0.582264361405466 0 0 1.18405230449283e-13 0 0 0 0 1.09000997044144e-10 0 0.000756723463378558 2.12703460597673e-05 4.56988678152278e-17 6.37445475353372e-06 0.000248483647870165 8.13107137915411e-11 0.00155562182257564 0.00243390556795618 0.00101872102727295 0 0 0 0.00369285177431756 0.00207410396995963 0.00189199484487803 2.20905946829312e-13 0 0 0.000821233761905463 0.000484014615539015 0.00201547381290885 NM_001080223.1 nucleoside transporters Bos taurus solute carrier family 29 (nucleoside transporters), 0.0 2856 99.94 0.422892209178228 NM_018344.5 SLC29A3 Homo sapiens solute carrier family 29 (equilibrative nucleoside transporter), member 3 (SLC29A3), transcript variant 1, mRNA. 0.0 928 73.37 0.424226254002134 TCONS_00160456_2 sp|A1A4N1|S29A3_BOVIN S29A3_BOVIN Equilibrative nucleoside transporter 3; 0.0 540 100.00 0.996268656716418 1 coding 0 0 1 1 -0.0560615922852838 0.646143035619782 0.028864926655085 0.625106706118898 CTTTACAGATGAGCAGACTCTGGTCCCAAGAAGCCATGTGAGCCCCCAGGTCACAGCGAGAGGAGCCATGGGGGGCACCCTCAGTGCCGTGGCCTCGCTGGTGGACCTCGCGGTGGCCAGTGACGTGACAGACAGCACCCTGGCCTTCTTCCTGACGGCAGACATCTTCCTGGCGCTCTGCATTGGGCTCTACCTGCTGCTGCCGCGGCTGGACTATGCCAGGTACTACATGAAACCTGTCTGGCCAACCGTGTTTTCTGGTGAAGAGCAGCTGCCTCAGGACTCCCCCAGTCCCACTTCAGTGGCCCCAGGATCCAGCGACCCCCAGACGCCACCCCTTGGCCCCATCCTGAAGAAGACCACTGGCCTGGGCTTCTGCATCATCTATCTCTTCTTTATCACCAGCCTCATCTTCCCCGCCATCTGCACTAACATTGAATCCCTCAGCAAGGGCTCAGGCTCGCCGTGGAGCACCAAGTTCTTCGTCCCCCTCACCACCTTCCTCCTGTACAACTTTGCCGACCTGTGTGGCCGGCAGGTCACGGCCTGGATCCAGGTGCCCGGGCCCAGAAGCAAGGCGCTGCCCGGGCTCGCGCTCCTCCGGACCTGCTTTGTCCCCCTCTTCGTGTTCTGCAACTACCAGCCCCGCGGCCACCTGCACACAGTGCTCTTCCAGTCTGATGTGTACCCGGTGCTTTTCACCTCGCTGCTGGGGCTCAGCAACGGCTACCTCAGCACTCTGGCTCTCATCTACGGGCCCAAGATCGTGCCCCGGGAGCTGGCCGAGGCCACCGGGGTGGTGATGACCTTTTACATGGGCCTGGGCCTGGTGCTTGGCTCCGCCTGCTCTGCCCTGCTTGTGCACCTCATCTAGGAAGGGCGATGACCGGACTTCAGTGCTGCATGGCGCCTGGGAGCTTCAGCAGGATGGGCAGGAAGTGCCAGAAGGGCCCAGGTGGTGAGCAGGAAAGGCTGGAGTTGGTCTCTGCAGAGCCCAGCACACACCCGGGCCTGGTTGCTCCCAGGGATCTGGGACCGGTGCCATTCCCAGGCCAGGCAGACATTCCAGACACTTCAACAGACGTCCTGAGACGTTTCAGGACCAAAGACACCTGAATAAGACACAGTTACCAGTTACACAGTCAGAAAACTCCTTGCCAGTGGGCGCGTTCTGCCTGTCATTATTCCCTCCTGGGAACTGTGTTGCCAGTATTTGGCTCTGAGTTGTTAGAGGGCGAGTGCCAAGGCTGTCTCCAGTCACTTTGCCTTCTCCCAGCCTTGCTCCTTCCAGCTGATGGCAAGATGGGAAGTCCCAGGGAAGTCCCCCTGGGATGGCCAGGGGACTTCCCAGGGAAGTCCCCCTGGGATGGCCAGTCCTCAGGCCCAGGACCCGAGCCTGTGCAAACCCCACTTTCCACTAACCAGACCGCAACCCTGGGAAGGCAGGCCTTCCAGGAGCCCTTCATTCCCTGGACGTGGGCTCCAGAGGGCCTCCCTGTGTACACGGGACCAAGCATGTCAGGCCTGGATTTCAAACAGGGATCCTTCAAGTGGTCTGTGGCCTGGGTCAGGACAGGGTTACGTCCCTGTTTACAGAATGTCAAGGCCATTGGTTCAACGGCCTAATAAATACCTGGGTATTTAATGAAAGCCTTATTGATGGCTGTTTTAGGGTCTTGGCAGGAAACAGCATACTCAAATTGAGTAATTTAAGAATATTTGAAGAGTGAATATAGGAACCCTAAGGGGTTATGTGCATTATATCCCAGAAGTAGTAAGGTGGTCTTTTCCAGGCCTGAGGAGAGGGGCACGTCCAGCCTGCTGTAGCCCACAGGATGTGTGTCCCCTCCCTGCCATCCCTCTACAGCCGAGAATCAGGCGGAGAACAGAGTGTGGATGGAGGGGCAGGTGTCCAGGGGGAGCCACAGGCCCCTTCACTTGCATAAGTGGTTTATTATGAGCATCCGTAGAGCTCTGAAGCTTTGTCAACAGAATTAGATGTTCCTTTGTCCTGGCTTGTTCTGAGTACTTGTGTGTTTTGAAGCTGTTGTTTCCAAAGGCAATGCTCGTGTTCTGAGGCCCCCACATGCTCCCCTGACATGAGTAATAATTTGTATTTTTTCAGGTTCCTTGAAGGCTCCCACAAGGCTGTTCCCTGGGGGAGCAGGCTGACGTGGGAATTAGAGAAAGGGACTAGATCAAGCAGGAGTTCTTTCTCAAGAATCATCCTGGAAACACAGAGCTTACCCCCAAGAAGTGGCAACCCTGAGAGACATAAAGCAAGGAGCCCCTGCTCTGAAGAGTGCCAGATCTGAGATGTCCTGCAGACAGCTGATTAAACCGGGAAGCAGCCAGTAATCCACCCAATGGCAGCAGATTATGTTCCCTACCGACTCAGGCTAGTGCACACTCCTTTTCTTTCACCAGAGATTGAAAAGGACACCCTTGAAAGGTTTTCTGAAACCTGACACTTGAAAAAAAATTTTTTTTTAATTAAAAAAATAAATTATCCCATCTCCCCTCATCTTGCAGGAAGCTGAAATCTCCCCCTTGGTTTTTTTCACTGCCTTCGGTGCTGTTGATCATTTGGGGCATCTGTCTGGCAGGTGGCTCATCTCAACCTCAGGTATCTTATAAATGGGCAGCATGTCTGTGTGAAGGTAAAACTGCAGTCTCTGAGCTCGGGGGTGGGGACTACCTGGAGCTAACAGAGGAGGAGTGGGGGTCTCTCATGCTCTGTTGAAGAGGGGTAGCTTTCCTCTGGTAGTAAGATGATTTGAAATTAGCGTGAAGTGAGAGGGGGAGGAGGGTGGCCAGCCATGTCGGTGCAGCGCTGTGGGAACTGAGATGATGGACTCTCAGTGCCAGCGCCAGCGCCAGCTCTGCTGCTAGAGGAAGGGCCGGCTGCTCGGCTGGTGGGAAGAGTATTCAGGCTTTTTCCCACTCTTCTTTGTTGCTCACTTTAGTGGGGATTTTGCAAAGGATCATTTCTTCTCAGGGAGGGAGGAAGGAGAATAAAAACACATCTCCAAGTAGAGGGGCAGACCGTGGAGTTCAGGCACTCTTGTCCCCGAGTTACTGTAACAGCTGCTCGTGGGGCTTGGCTGCTCTGGGTCTCAAGTCTCGTGTGACCCTAGCAGGCTTGTGGAACTAGCTCACATGTTCTGGGTGTGAACAAAACTTGCTAAAGAGAAGGATTTTTCCGTGAAAGAGGTGGAGAGGGATCCCCGAGACATTGCCTTTGTCTAATAGTTCTCTCATTCAATCCCAAGTGGCAGTTTTTAGTGCATGCCCTTGTGTATTTCCAGACATTGTCATTTTCCTCCTTTCATTCAAAACAGAAAGCCAAAGGCAGCCAAACGACTGACTGTTTAACTAGTGGGTGACCAGTTCCTGCACCCATGAGGCCATGAGAAGGCTTGAATCAGGGGTAGATTTTATTAACAAAGACCCTCATTCTGCTGTCTTCAGCCCAGTACTGCCAAGGAGATTTGGGGCCTTCTAATTAGCTTGGACGTGACATGAGTTGGGATGGAGGGGTCACTTCAGGACCTCAGCTTCTGAGACTGTGGAATGCTTTAACAGAGAACACCAACTAAAAGAGGGAAGGCCAAAAGTCAGTTGAAAGAAGATTTTATTCCACTGGAGGTTACATTTAAATAAAAGATGTTTATCTTTAAAAAAAAAACTGTATCACAGTTGTTTTACAATGTTGTGTTAACTGCTGCTGTACAGCAAAGTGATTCGG EMBV3_40684 TGGCCCTTCCCGCAGCAAGTCTAGCACTAGTCACGTTTAGGCCAACCTTTGTGTCTTCTT Gene GeneID:508442|BAZ1B:XM_002698188:714_cdna UTR3_Alt 3 NULL GeneID:508442 25 GENE BAZ1B NULL bromodomain adjacent to zinc finger domain, 1B EMBV3_29073 GAGGCTGGAAGGAAACTGTATGTGAAAACCTGGATTTATGGAACCTTGATTGGCTGCTTG Gene GeneID:530414|AGPAT5:NM_001075932:8_cdna Constitutive 3 NULL GeneID:530414 27 GENE AGPAT5 MGC142713 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) EMBV3_27817 AGAGCCATCCAGGTCGCTCTTTGCTCGCGGCGTCCAGACTGCCGTGATCAACGTCTTTAA Variant GeneID:505048|PRR5L:NM_001015519:24_cdna 143^429 1 EMBV3_20457 GeneID:505048 15 GENE PRR5L FLJ14213 PROTOR2 proline rich 5 like EMBV3_07071 CAGGCAAGTGGGAGATGGCTGATCCTGACCCTGGGGAAAGAAACTATGACAACATGCTGA Gene GeneID:790482|LOC790482:XM_002688005:150_cdna Constitutive 0 NULL GeneID:790482 5 GENE LOC790482 NULL hypothetical LOC790482 EMBV3_00240 GAACATGTGCAAGCTCAAACCGTTGCTCAACAAGTGGCTGGAGGAGGCGGACTCGAGCAC Gene GeneID:100337252|LOC100337252:XM_002691194:119_cdna Constitutive 0 NULL GeneID:100337252 11 GENE LOC100337252 NULL POU class 3 homeobox 3-like EMBV3_25112 TGGAGGCCCAGCATGAAGCCTTTCCCTGGGGTTTTGTTAGATTTGGAAGGAGCTATCCCT Gene GeneID:506485|PBXIP1:NM_001075265:91_cdna Constitutive 0 NULL GeneID:506485 3 GENE PBXIP1 NULL pre-B-cell leukemia homeobox interacting protein 1 EMBV3_18705 CTGTGCAATACCGAAGCGTCATGTTTGCTAATGTGGATGTGGACAATGCTCGGGAGTTGG Gene GeneID:777785|TXNDC8:NM_001078160:16_cdna Constitutive 0 NULL GeneID:777785 8 GENE TXNDC8 MGC148344 thioredoxin domain containing 8 (spermatozoa) EMBV3_35803 GAAAAAGACCGACTGGGAAGTCGAACTGGGCGTGGTCATCGGCAAGGGCGGCACCTATAT Gene GeneID:100301243|LOC100301243:XM_002683906:3_cdna Constitutive 0 NULL GeneID:100301243 Un GENE LOC100301243 NULL similar to fumarylacetoacetate hydrolase domain containing 1 EMBV3_24076 GAAGCGCCTTCTTGGCTTCTTGGGGTCTTTGGTTGGCCGCCCTATTTTGTCCTGTTACTT Gene BVV0101_049162 + 0 NULL GK000023.2:6666337-6771145 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133811 1 XLOC_081219 NonCoding TCONS_00133811 XLOC_081219 NonCoding NonCoding - 23:6736282-6738182 - TSS99868 1332 2 TCONS_00133811_2 89 0.213963963963964 3 0.300157977883096 0.000173646238085267 0 3.47372720080058e-05 1.87029745025701e-05 0 2.68547397404335e-06 4.37815926939163e-06 3.10832963403676e-05 0.000515346361283719 0 0 0 2.15411514030467e-06 0 0 0 0 0 1.61507502859161e-05 0.000318539690202773 9.11631876303179e-06 0 0 0 0.000213263992618381 0.000206286900996697 0.000290318702848058 0 0 0 XM_583188.7 LOC506707 PREDICTED: Bos taurus zona pellucida sperm-binding protein 3 receptor-like (LOC506707), mRNA. 7e-30 136 86.84 0.0833333333333333 0 noncoding 0 0 0 0 0.0864155855818898 0.537949245108409 0.0636067785406813 0.201012585397703 CCTCTTCACCACCCGGATGTCATTCCCAGCTGTCAGGAGGGAGGTAGCCTTTCTGTTCTATTCAGGTTCTCAACAGGTTGGGAGGCTGGGCCCATCCGCGTGCAGAGGATGGTGTGCATTACTCCGCCCACCGACTCCAATACTTCTCTCTCCCGGAAACACCCTCGCAGACACCCGGAGACGCCCTCACAGACACCCGGGAACACCCTCACACACCCAGGAACACACAGACACCCGGGAACGCCCTCACGGACACCCGAAAGTAATGTTTAACCAGCTTATATGAGGAAACAGCAACCCACTCGTGTTCTTGCCTGGAGAATCCCAAGGATAGAGGAGCCTGGCGGGCTACAGTCCACGGGGTCGAGAGAGTCGGACACGACTGAGTTACTAAACCATGAACATCTCGGCGCGCAGTCAAGCTGCTAAGTTAATTAACCATCACAGGGAAAAATTATTTCACTGAAGAAGTAACAGGACAAAATAGGGCGGCCAACCAAAGACCCCAAGAAGCCAAGAAGGCGCTTCGGAGATGCGGCGTCTGTCTGTGGCTCAGAGGTGAGACCCCAGGAAAGGGCAGGGAGGGGCTCGGAACAACCTGAAGGAGGCGGCAAAGAGGGGCCAAAGGGAGCAGTTGGCAGATGCCCATCTGAGGGGGATTCTGGAGATTAAAAGGTGACTCGTAAGAACGACAAAGTAAGTATTTTGCCACACTTTCTACCCTCCGTGTATTAGTTTTTATGTTTACACTACTTTCTATGTGAAAACAGATTTTACCTACAAACCATTTCAGGTGTTGAAGGTGCAAGTAAAGGTTACGTAGAAGCTTTAGTGCATCCCTGGTGCTTAGAGAAGCAAGGGGGGATGGCCCGTGTCCTGAATTGGAATTTTGTGTTTTCCCTACGAAATCTCACCTGCGCATATAACTCGAGACCGCACTGACTTCACATTAGAATCACCTGGAGACTCTTCAGAAGGTTAAGTTGGAGTGGGGGAGGGGCAGCGGGTTTTTCAGACCCTCCCCAGGTGAGCTGAGGGTACTGGTGGCCGCGATAGGAACACTGTGTGGGCACTTAGCGCTGCTGCACCTGCGGGGGAAGCGTGGGGATGAGGTGGATATTTCGGAGACGTGGAGACATGTTCCCACACGGCTCCTCTGAGGAAACTTCCCCAGCTCACGTTGCCTTTAGGACGTTGCCTGATGAACTCATCTGTTGGCCTCGCTGCGGAGACCATAATACACCTGTGGCAGGAAGTGGCCAAGAGATGCTGGTCTGCGCAGTCTGCACATGCATGCAAAGGGCTGAAATATTTTAATGAATGAAATTTGTC TCONS_00132051 r 5' 34706 TCONS_00132051 r 5' 32964 EMBV3_39884 TCCAATCAGCAGAGTTACATCGCAGCCATCAGCGCTCGCTTTGTGCAGCTCCAACACAAT Gene GeneID:537016|CPEB3:XM_002698375:1_cdna UTR3_Alt 2 NULL GeneID:537016 26 GENE CPEB3 NULL cytoplasmic polyadenylation element binding protein 3 EMBV3_13915 GATGCTGCGTCCGAGAGACAGTGTGATAAACTAGAGGGAAATCTTGGGCTCTGAGAAGGA Gene BVV0102_049224 + 0 NULL GK000005.2:78507978-78552286 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195685 TCONS_00192596 2 XLOC_118119 XLOC_117236 Coding TCONS_00195685 XLOC_118119 NonCoding NonCoding AMN1 5:78549007-78552314 x TSS145773 615 2 TCONS_00195685_2 71 0.12520325203252 2 0.814579552329099 0.000700010091588099 0.000161598004463269 0.00024658108101194 0.000786629194450099 0.000118302441150479 1.07615091429555e-114 9.79095782895179e-26 2.36700550203661e-09 1.15914476487587e-45 8.56195054845079e-33 7.52754650993454e-81 0 2.37457821587053e-61 2.84616069705696e-05 7.97758044143533e-06 0 0 0 0.000263449115433039 9.89588852588551e-05 0 0 1.59961687425432e-36 0 1.30276699619726e-93 6.9589306198924e-05 0.000144103407966401 1.11308278207594e-188 2.80793453385694e-66 0 XM_005206834.1 AMN1 PREDICTED: Bos taurus antagonist of mitotic exit network 1 homolog (S. cerevisiae) (AMN1), transcript variant X2, mRNA. 8e-06 55.4 100.00 0.0471544715447154 NR_103522.1 AMN1 Homo sapiens antagonist of mitotic exit network 1 homolog (S. cerevisiae) (AMN1), transcript variant 4, non-coding RNA. 1e-09 68.0 78.57 0.133333333333333 0 noncoding 0 0 0 0 -0.065130437329766 0.570389213076993 0.0285909794405526 0.608964805728605 GATTCAGCCAGAGACCGTCTGTCAACTCCCGCCTCCAGCGCAACGCGTAGTCCCTCGTGACGTCACCCGCCTCTTCCGGTGACCAGGCGCCGGCGCTCTCGCCACTACAGAGGGAGAGCGTAGCCCCCTCGGGGCGGAACCCTGGATGCTGCGTCCGAGAGACAGTGTGATAAACTAGAGGGAAATCTTGGGCTCTGAGAAGGACTGCGTGAGCTGTCATTCTGCAGTCCCGCCGGCGCGGCTCCGGCGGTTTCCCTCGTGGGCTAGCCAGGTGCCGGACCTCTTCTAGTACCTCCTGGAACCTCGCGGCTCTGCGCGTGGCCGCTGTTACTACAGGGGTGCATTTCATGCTGGGCCCAGCGTTAGTGGATGCACACCGGAGACCCTCTTAGATACAGAAACCATGACCGTCAAAGGGCGTGTTTTAGAGGACTGGAGAGTGACGTTTATCGAGCACTTCCTACTTTTGAAAGTTGGAAGACAGTATTGTTCATTTCTTCAAGATGCTGCTTATTCAATCACCACACTTTTACCAGTGCTGAAGGAGGGCAAGAATTGTGCTGGGTGCTGAGGATTCAGTGGTGAACACTTGAACCAGACAAATAAAGGGCAATC TCONS_00192596 r 5' 2239 TCONS_00192597 r 5' 0 EMBV3_25264 TTCTGGATGGATCTGTGAGCCTGACTTAAGGTCATGTGAAGAAAGAGTTTGAGTTTGTCC Gene GeneID:523322|ZNF667:NM_001102078:43_cdna Constitutive 0 NULL GeneID:523322 18 GENE ZNF667 MGC140150 zinc finger protein 667 EMBV3_13877 GGAGCAAGCGTCTTTCATGCCTGCAGTCACCATCTGCACTGATTTTGGAGCCCAAGAAAA Gene GeneID:508021|MGC166151:NM_001101892:98_cdna Constitutive 2 NULL GeneID:508021 3 GENE MGC166151 NULL hypothetical LOC508021 EMBV3_12731 GTGACTTTGAGACCAGGAACTTCTGGATCGGGCTCACCTACAAGAGCGCCAAGGACTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41761 CATCCAAAACATGGGACAGGACCACGCAGGGAGCTATCAATGCTACGGTGGACACGGCCT Gene GeneID:618411|LILRA4:XM_002695430:37_cdna Constitutive 0 NULL GeneID:618411 18 GENE LILRA4 LILRA2 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4 EMBV3_01671 TTTGAGACTGTGTACGACGGCTACTCCAAGCACGCATCCACTACTTCCTGCTGCCAGTAT Gene GeneID:516158|LYNX1:NM_001046221:101_cdna Constitutive 0 NULL GeneID:516158 14 GENE LYNX1 MGC140216 Ly6/neurotoxin 1 EMBV3_13004 TCCAGAGCTGTCTGGATTCGAGTCTGTTGCACTGAGGAGAATTTTTAAAGTTCCTGCCAG Gene BVT0102_284441 + 1 EMBV3_17373 GK000029.2:5831846-5845678 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162959 TCONS_00162961 TCONS_00162960 TCONS_00162962 1 XLOC_099781 Coding TCONS_00162959 XLOC_099781 Coding Coding LOC616308 29:5842767-5851988 j TSS122255 1957 1 TCONS_00162959_2 465 0.0970873786407767 7 0.788503253796095 1.510566771155e-10 1.29759086922322e-10 1.02790474945759e-10 1.15703265149385e-10 7.06269473545574e-11 4.8076143155676e-06 6.66540213207977e-06 3.8737382377173e-06 8.68027612666624e-06 0.00336293956156895 0.000673197885228025 0.000768032912911972 0.00850490922886573 0.0210949760239113 0.00948429634654216 0.00060371511026692 1.43231461462192e-10 2.20680668544928e-10 2.18579171584137e-09 1.13304043437863e-05 7.07664945996096e-11 8.41887633110156e-06 0.000602776909923257 0.000484619894854877 4.76444263611035e-09 9.09906492972167e-11 2.76799079256468e-10 0.000289071487051488 5.85958443379527e-06 6.9360559260074e-06 XM_002699043.3 LOC616308 PREDICTED: Bos taurus tripartite motif containing 64-like (LOC616308), mRNA. 0.0 2720 99.10 0.788962698007154 NM_001136486.1 TRIM64 Homo sapiens tripartite motif containing 64 (TRIM64), mRNA. 0.0 801 73.36 0.686765457332652 TCONS_00162959_2 sp|A6NGJ6|TRI64_HUMAN TRI64_HUMAN Tripartite motif-containing protein 64; 0.0 537 58.39 0.952688172043011 4 coding 0 0 0 0 -0.152910337377551 0.326084754683999 0.19864630338227 0.00951449496887203 ATTGCATTCTTCTCCAGCATCCAGAGCTGTCCGGATTCGAGTCTGTTGCACTGAGGAGAATTTTTAAAGTTCCTGCCAGAAGGAGGTGAGCACCTAAGTTCTGACCTGAATTGAATAGCTACTTACCGAACAGGAATGAAATTTCATCAACTACATTTCATCAAGTGCACCCAAAGAAACATGGATTCAGACACACTGGAAGCCTTCCAGAGTGAACTCACCTGCTCCATCTGCATGAACTGCTTCCTAGACCCCATCACCATAGACTGTGGGCACAGTTTCTGCCGTCCCTGTCTGAGCCTTTGCTGGGAAGAAGGCCAGTCTCCAAGGAACTGCCCTGAGTGCAGGGGAATAGAAGAGAGGCCCCATTTCCAAACCAATATTGTACTCAAGAGTCTGGCCTCCCTTGCCAGACAGGCCAGAGCTGACCACGACCACAGCTCTGAGGAGCAGATCTGTGTGACACACCAGGAAGCCAAAGGCCTCTTCTGTGAGGCTGACCAGACCCTGCTCTGTGGGCCCTGCTCTGAACGCCCCGAGCACGCAGCTCACAGCCACAGTCCAATACACAAGGCTGCTGAGGAATCCCGGGAAAAATTTTTGAAAAGAATGAGCTCTTTATGGAAAATGAGAGAAGAAATGCAACTCATTCTGAATCAGGAAGCTAAAAAAACTCAGTCATTTAAGAAATATGTGACCCTAAGGAAGGTGATGATTAAATTTGAATATCAGAGGAGGCATCCATTGCTCCAGGAGGAGAAGAAACCGCATCTGGAGGCCCTGAAGAAAGAAGCCAAGGAGATTTGTCTACAACTCAAGGAGAGTGTGTTCAGAATGACTCAGTACATAGAAAGACTGAGAGAAATGTACAGAGAGCTGACCGAGATGTGCCACAAGCCGGACACAGAGCTGCTCCAGGCCATGGGAAATGTATTGGAAATGACCTACTTGGCACAGATGCAGACGCCTCAGCCAGTGAACCCAGAGCTCACTTGTTGGCCTGTTGCTGGAATCCTAGACACTCTGAACAACTTCAGAGTGGATAATGTTCTGACTCAGACAACCATTCACCATCTGAGCCTTGATGATGCAAGTGTGATGTCAGGAGATGACCCCCAGGGTATGTCCAGACAGCTTGATGGTGGGGAGAGCTTTGTGGCCTGGGGAGCTCAGGCTTTCACCTCCGGGAGGCATTACTGGGAGCTGGATGTGACACACTTCTCCAACTGGATTCTGGGGGTCAGTAAAGATATCTTGACAAGTGATACTATTATCCGTATTAATTATGAAGAAGCATTTCTTCTATTTTCTGAAAAGGTGAATGACCAGTATAGTCTCTTCACCAACTCCCCACCCTTAGTTCAGTTTGTAAAAAGGCCTCTGGGTAAGATTGGAGTTTTTCTGGATTATGACAATGGAGCTTTGAGCTTCTATGATGTTTCCAGAGGATCCCTCATACACAGTTTCCTTCCTTCCTCCATCTCCTCCCCTCTGAAGCCTTTCCTTTGCCTTAGGTCTCCAAGAATTTTCTAATTCTCTGACCATATTTTTTAAATTCTTCCCTGAGGATGTTGCTATCTTAAGCCTCATGCAAGGTCACAGAACAATACCTGACTGTGTCTGAGCACACTGCAATTTAATGAAACATAATGATTGTATGTTTATAAAATGGCTTAAACATGTTGAATGTATAAATTTGTTAATAAAGTTTAACACAAAAATTTATTATGGAGTATGTCATAGAATAAAATCGATTGCTTTCCTTTCTTAAAAGATGATTTTAGTAAAATAAAAGTTACATTTCATAAAGATTAGCCTATTTAAAGTATATAACCCAGTTACTTTTTTAATATACAAAAATTCATGGAACCAGAGCTATGTAATTCCAGGACATATCCATCACCCCAGAAAGAAATCAATGCCCATCAACTTATATTCCCCATTGCCCCTCCCCCTT EMBV3_43774 CCTGGTTCTGGCTTCTGGACAGTCTTTCCGTTCCGTGGACCCCCACTTTCAAGAGGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32164 ATACTCTGGAAACTCTAAAGCCTTGTCTCCTGGACCTTCACCAGACCTACCTCAGAGCAC Gene GeneID:281667|CCNA2:NM_001075123:37_cdna Constitutive 1 NULL GeneID:281667 6 GENE CCNA2 CCNA MGC139704 cyclin A2 EMBV3_01138 GACCCAAGCCTTCAACACAGAAACGTAAAATGGACGGAGCACCTGATGGCCGAGGAAGAA Gene GeneID:537503|SMARCA5:NM_001105416:44_cdna Constitutive 0 NULL GeneID:537503 17 GENE SMARCA5 MGC160027 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 EMBV3_12961 GCCCGTGCCACAAGCATAGATGTTAAACTGGTTTCAATTACAACAAAGACAGCTGCTGAT Variant GeneID:529491|PMS1:NM_001077981:36_cdna 233^415 3 EMBV3_39522 GeneID:529491 2 GENE PMS1 MGC152061 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) EMBV3_19028 GAGAGTCCCGTTCTGATTGGACAAGTCAATTGTTCCTTATGGCTGGCGGTGAAGGCATTG Gene GeneID:515957|HIST1H1E:NM_001098989:89_cdna Constitutive 0 NULL GeneID:515957 23 GENE HIST1H1E NULL histone cluster 1, H1e EMBV3_26865 CATGAAGGCTGACATGATGCCGTTCCTGTATTGGAATTTGATGCTGAGGGGCTACTGGGG Gene GeneID:507858|SQRDL:NM_001040511:44_cdna Constitutive 0 NULL GeneID:507858 10 GENE SQRDL NULL sulfide quinone reductase-like (yeast) EMBV3_39997 TCAGCAGAAGGAGCTGGAAAAAGTCTGCAACCCCATCATTACCAAGCTGTACCAGAGTGC Gene GeneID:281831|HSPA8:NM_174345:34_cdna Constitutive 0 NULL GeneID:281831 15 GENE HSPA8 HSPA10 Hsc70 MGC128130 heat shock 70kDa protein 8 EMBV3_35929 CATTAACAGCCTGTTACAAGAATGGAAAGGATTATCCCAGAAGAGGTTCAAACCATTGGT Variant GeneID:520752|HECTD2:XM_002698383:24_cdna 663^818 1 EMBV3_09137 GeneID:520752 26 GENE HECTD2 hmm77879 HECT domain containing 2 EMBV3_27565 GCAAATTTTGATTTTCCACTCTAGAACCGGAGGAGACTTATCTCAGTGACCAAGGAAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11480 CTCCCTCCTCTGCAATCCCACCTGGAAGTTTGGGAAGGAGGCCACTCAGATAAACTTAAA Gene BVT0102_088983 + 0 NULL GK000023.2:27946342-27962142 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134628 TCONS_00134629 1 XLOC_081468 Coding TCONS_00134628 XLOC_081468 Coding Coding LOC100847824 23:27949618-27961958 = TSS100312 3536 1 TCONS_00134628_6 1065 30 0.715860280411703 5.63029982048424e-08 5.11511801349407e-05 3.83168199317403e-08 3.4738908769517e-08 2.02973920418053e-08 1.01160864404796e-05 2.35165787877172e-08 2.47546067535995e-08 3.31267953261828e-08 9.218622120659e-05 2.55725646356669e-05 0.000159771033736367 1.15960211315116e-08 1.89496046594791e-08 1.89954289301855e-08 0.00220337302184031 0.000365504734255488 0.000359430761563941 2.87790758713107e-08 2.89775550808515e-08 1.24476134479444e-08 0.000344094939716377 0.000385895292703299 0.000262161575038251 2.89616554184333e-08 6.77447304147815e-05 2.35091912019663e-08 0.00028793324308704 0.0001866111720354 0.000194763972594984 NM_001256544.1 VARS2 Bos taurus valyl-tRNA synthetase 2, mitochondrial (putative) (VARS2), mRNA. 0.0 6377 100.00 0.999717194570136 XM_005272846.1 VARS2 PREDICTED: Homo sapiens valyl-tRNA synthetase 2, mitochondrial (VARS2), transcript variant X1, mRNA. 0.0 4147 86.14 0.985011312217195 TCONS_00134628_6 sp|Q5ST30|SYVM_HUMAN SYVM_HUMAN Valine--tRNA ligase, mitochondrial; 0.0 1877 89.63 0.995305164319249 3 coding 0 0 0 0 -1.50458206826404 0.0269797897328088 -0.120794621019497 0.294343793683922 TCCTCAGTACCTGCCGCCGCCCCCCTACGCTCCACGCCGCGGGGCGCCCTGGGATAGCGGCGGGCTCACCGGCTGGAACAGACTTTGGCCCCTTGCCAAGCACTCCCGATGCCTCATTTACCTCTGACCTCTTTTCGACCACCGCTTTGGGGCTTGAGGCCCTCACGGGGCCTCCCCAGGTCCCGTCCCCTTTCCACCCAGTCAGAGCCAAATGGATCAGCCATCTCCCGGAGGAACCGTGAAGCCAAACAGAAGCGCCTGCGAGAGAAGCAGGCATCGCTGGAGGCTGGGATAGCCCCCAAGAGCAAGTCACCTGCAGAATCCAGTAAGGCCTGGACCCCTAAGGAGAGAGTGTTGTATGAAATCCCCACGGAACATGGAGAAAAGAAAGATGTCTCCCGACCCCTGCCTCCTGCATACAGCCCCCAGTACGTTGAGGCTGCCTGGTACCCTTGGTGGGTGCGAGAGGGCTTCTTCAAACCAGAATATCAGGCCAGGCTGCCCCAGGCCACAGGGGAGACCTTTTCCATGTGTATCCCACCCCCTAATGTCACAGGCTCCCTGCACATTGGGCATGCGCTGACCGTGGCCATACAGGATGCTCTCGTGCGCTGGCACCGGATGCGTGGGGATCGGGTGCTGTGGGTCCCTGGCTCAGATCATGCAGGGATTGCAACCCAAGCTGTGGTGGAGAAACAGCTGTGGAAGGAGCGAGGCGTGAGGAGACATGAGCTGAGCCGGGAAGACTTCCTTAGGGAGGTGTGGAAGTGGAAGGAGGAGAAAGGTGGCGAGATCTGTGAGCAGCTCCGAGCGCTGGGGGCCTCCCTGGACTGGGACCGAGAGTGCTTTACCATGGATACCGGCTCCTCAGTGGCCGTGACAGAAGCTTTCGTGCGGCTCTACAAGGCTGGGTTGTTGTACCGGAGCCGGCAGCTGGTCAATTGGTCGTGTGCCTTACGCTCCGCCATCTCGGATATTGAGGTGGAGAGCCGGCCCCTCCCTGGCCGCACGGAGCTTCAGTTGCCTGGCTGCCCCACCCCCGTGTCTTTCGGCCTCCTCTTTTCTGTGGCCTTCCCCGTGGATGGAGAGCCTGATGCAGAGGTTGTGGTGGGAACCACGAGGCCAGAGACGCTGCCTGGAGACGTGGCTGTGGCGGTCCATCCTGATGATTCCCGCTACACGCATCTACATGGGCGACAACTCTGTCATCCCTTGACGGGGCAGCTTCTCCCTCTTATCACAGACTGCACTGTTCAGCCACACCTGGGCACAGGGGCGGTGAAGGTGACTCCAGCGCACAGCCCTGCCGATGCTGAGCTGGGGGCCCGACACGGCCTGAGCCCCCGGAGTGTCATTGCGGAGGATGGGACCATGACCGCCCTTTGTGAGGACTGGCTGCAGGGTCTTCACCGATTTGTGGCCCGGGAAAAGATTCTGTCAGCACTGAGGGAGCGGGGCCTGTTCCGGGGCCTCCAGAACCACCCCATGGTGCTGCCCATTTGCAGCCGTTCCGGGGACGTGGTAGAGTACCTACTGAAGAGCCAGTGGTTTGTCCGCTGCCGGGAAATGGGGGAGCGAGCCGCCAAGGCCGTGGAGTCGGGGGCCCTGGACCTCAGTCCCTCCTTCCACCAGAAGAACTGGCAGCACTGGTTTTCCCACATTGGGGACTGGTGTGTCTCCCGGCAGCTGTGGTGGGGCCATCGGATTCCAGCCTACCTGGTTGTAGAGGAACATGCAAAGGGTGAAACGGAGGACTTCTGGGTGGTCGGGCGGACAGAGGCTGAGGCCAGAGAAGTAGCTGCAGAATTAACAGGGAGACCAGGGGCGGAGCTGACCCTGGAGAGGGACCCTGATGTCCTGGACACGTGGTTCTCCTCCGCTCTTTTCCCCTTTTCTGCCCTGGGCTGGCCCCGAGAGACCCCGGACCTGGCTCGTTTCTACCCCCTGTCACTTTTGGAAACGGGCAGTGACCTCCTGCTCTTCTGGGTGGGCCGCATGGTCATGTTGGGGACCCAGCTCACAGGGCAGCTCCCCTTCAGCAAGGTCCTGCTTCACTCCATGGTCCGGGACAGGCAGGGCCGGAAGATGAGCAAGTCCCTGGGGAACGTGCTGGACCCACGGGACATCATCAGTGGGGTGGAGCTGCAGGTACTGCAGGACAATCTGAGGGATGGAAACTTGGACCCCGCAGAGCTGGCGATTGCAGCCTCAGCGCAGAGAAAGGACTTCCCTCATGGGATCCCCGAGTGTGGGACAGATGCTCTGAGGTTCACCCTGTGCTCCCATGGGGCCCTGGGAGGTGACTTGCACCTGTCCGTCTCTGAGGTCCTGAGCTTCCGACACTTCTGCAATAAGATCTGGAATGCCCTGCGCTTTATCCTGAATGCTCTTGGGGAGGAATTCATACCCCAACCTGCGGAGGAGCTGTCCCCCGCCTCCCGCATGGACACCTGGATCCTCAGCTGCCTGGCCCGCACGGCCCAGGACTGCGAGCGGGGCTTCCTCACCCGCGAGCTCTCGCTCGTCACCCACGCCCTGCACCACTTCTGGCTGCACAACCTCTGTGATGTCTACTTGGAGGCTGTGAAGCCGGTGCTATCACACTCTCCCCGCCCTCTGGAGCCGCCTCAGGTCCTGTTCTTCTGCGCAGACGTCGGTCTCCGCCTCCTCGCCCCGTTGATGCCTTTCCTGGCTGAAGAGCTCTGGCAGAGGCTGCCCCCCAGGCCTGGTGGTCCCTCTGCCCCCAGCATCTGTGTTGCCCCCTACCCAAGTGCCCGCAGCTTGGAGCACTGGCACCAGCCTGAGCTGGAGAGGCGCTTCTCCCGGGTTCAGGAGTCCGTGCAGGTGCTCAGGGCTCTGCGCGCCACCTACCAGCTCACCAAGGCCCGGCCCCGAGTGCTGCTGCAGAGCTCAGAGCCAGGCGAGCAGGGCCTCTTTGAGGCCTTCCTGGAGCCGCTGGGCATCCTGGGCTACTGTGGGGCGGTGGGCCTTCTACCCCCTGGTGCAGCAGCCCCCTCAGGCTGGGTCCAGGCCGCCCTCAGTGACACCAGTCAGGCGTATATGGAGCTGCAGGGCCTGGTGGACCCCCAGACCCACCTACCTCGGCTGGCTGCCCGAAGACACAAGTTGCAGAAGCAGCTTGATGGCCTCCTAGCCCGGCCCCCATCCGAGGGACAGGCGGAGACTCAGAGGCAGCAGAGGCTTTCTTCCCTCCAGTTGGAGTTGTCAAAACTGGACAAGGCGGCCTCTCACCTCCAGCAGCTGATGGATGATTTTCCAAGCCCTGGGAGCTCACCATCCCCGTGACTTTCCTTCCTCCCAGACCCGCCTTTGAGGCCTCTGGGGACAGACCGGGCAGCGTCGGGGTGTTCTGTGGTCCAGCCCCTTCGTTTTGTCAGTGAGGAAACAGACTGGCTTGGTCAGATGACTGGGTGACCTCGAGACACTCACGTGTGTGCCCTGGCCTCCCTCCTCTGCAATCCCACCTGGAAGTTTGGGAAGGAGGCCACTCAGATAAACTTAAAATCCCAAACGTG EMBV3_06123 CCCACGGCGGCAGGATCGACTACATCGCGGGGTGAACTGGAGATCCAGAGAGATGCCCTG Variant GeneID:519017|APRT:NM_001025334:267_cdna 228^361 1 EMBV3_11841 GeneID:519017 18 GENE APRT NULL adenine phosphoribosyltransferase EMBV3_05157 AGCCTGTGGGAAAGACAAAGGAGGAACTGGCTTTGGAGAAGAAGCGGGAACTAGAAAAGC Gene GeneID:505358|BRD2:NM_001045866:83_cdna Constitutive 0 NULL GeneID:505358 23 GENE BRD2 NULL bromodomain containing 2 EMBV3_17487 CACTCACCTAGAGCCAGACATTTTGGAATGTGAAGTCAAGTGGGCCTTAGAAAGCATCAC Gene BVV0101_074412 + 1 EMBV3_28375 GK000022.2:13354415-13368972 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060488 TCONS_00087337 TCONS_00032702 TCONS_00242346 TCONS_00022769 TCONS_00238313 TCONS_00109153 TCONS_00139137 TCONS_00201862 TCONS_00068672 TCONS_00009527 TCONS_00169610 TCONS_00109576 TCONS_00110353 TCONS_00040258 TCONS_00057020 TCONS_00143074 TCONS_00178988 TCONS_00088348 TCONS_00071654 TCONS_00020502 TCONS_00152742 TCONS_00162464 TCONS_00199779 TCONS_00231270 TCONS_00079337 TCONS_00229762 TCONS_00088966 TCONS_00100947 TCONS_00130890 TCONS_00023656 TCONS_00098773 TCONS_00188826 TCONS_00006896 TCONS_00063371 TCONS_00072967 TCONS_00022463 TCONS_00111173 TCONS_00083606 TCONS_00154504 TCONS_00124653 TCONS_00126154 TCONS_00210438 TCONS_00079500 TCONS_00091936 TCONS_00016728 TCONS_00185766 TCONS_00032664 TCONS_00009790 TCONS_00060495 TCONS_00221089 TCONS_00220641 TCONS_00031148 TCONS_00062027 TCONS_00040529 TCONS_00108495 TCONS_00021496 TCONS_00039905 TCONS_00074246 TCONS_00111941 TCONS_00189124 TCONS_00057506 TCONS_00182250 TCONS_00012113 TCONS_00071985 TCONS_00192140 TCONS_00000211 TCONS_00010927 TCONS_00007786 TCONS_00229688 TCONS_00143804 TCONS_00254634 TCONS_00124753 TCONS_00109433 TCONS_00175514 TCONS_00017325 TCONS_00189074 TCONS_00238588 TCONS_00197087 TCONS_00079471 TCONS_00176206 TCONS_00047844 TCONS_00063232 TCONS_00180497 TCONS_00023639 TCONS_00232810 TCONS_00187595 TCONS_00222892 TCONS_00187311 TCONS_00197959 TCONS_00200874 TCONS_00099649 TCONS_00206414 TCONS_00200553 TCONS_00243251 TCONS_00241894 TCONS_00218277 TCONS_00221136 TCONS_00231362 TCONS_00010824 TCONS_00054230 TCONS_00085917 TCONS_00000212 TCONS_00121471 TCONS_00235437 TCONS_00131278 TCONS_00150799 TCONS_00187302 TCONS_00020299 TCONS_00039410 TCONS_00207065 TCONS_00197957 TCONS_00193501 TCONS_00218971 TCONS_00008642 TCONS_00154324 TCONS_00088346 TCONS_00139140 TCONS_00238491 TCONS_00208876 TCONS_00251406 TCONS_00177000 TCONS_00006522 TCONS_00074921 TCONS_00209084 TCONS_00058292 TCONS_00063214 TCONS_00103962 TCONS_00182252 TCONS_00081454 TCONS_00235438 TCONS_00156657 TCONS_00008734 TCONS_00224109 TCONS_00056700 TCONS_00054240 TCONS_00083608 TCONS_00253002 TCONS_00110381 TCONS_00154945 TCONS_00040331 TCONS_00012055 TCONS_00064321 TCONS_00017330 TCONS_00147917 TCONS_00026461 TCONS_00193500 TCONS_00074926 TCONS_00099433 TCONS_00122054 TCONS_00019021 TCONS_00219614 TCONS_00060493 TCONS_00209889 TCONS_00047378 TCONS_00230018 TCONS_00088276 TCONS_00149773 TCONS_00122251 TCONS_00005986 TCONS_00009850 TCONS_00224154 TCONS_00041689 TCONS_00208061 TCONS_00199409 TCONS_00121529 TCONS_00007302 TCONS_00009375 TCONS_00031593 TCONS_00250871 TCONS_00156592 TCONS_00151311 TCONS_00074096 TCONS_00142407 TCONS_00022599 TCONS_00152775 TCONS_00218276 TCONS_00182825 TCONS_00085918 TCONS_00189172 TCONS_00221543 TCONS_00137108 TCONS_00021890 TCONS_00140844 TCONS_00254894 TCONS_00062028 TCONS_00224145 TCONS_00007353 TCONS_00106695 TCONS_00124129 TCONS_00233768 TCONS_00010407 TCONS_00090494 TCONS_00040593 TCONS_00124450 TCONS_00073939 TCONS_00239182 TCONS_00016729 TCONS_00254319 TCONS_00165726 TCONS_00005899 TCONS_00131340 TCONS_00016727 TCONS_00109960 TCONS_00175916 TCONS_00185777 TCONS_00198932 TCONS_00059941 TCONS_00153323 TCONS_00019886 TCONS_00012114 TCONS_00205462 TCONS_00137243 TCONS_00030888 TCONS_00083611 TCONS_00073726 TCONS_00116868 TCONS_00180573 TCONS_00142520 TCONS_00058116 TCONS_00098283 TCONS_00099517 TCONS_00182247 TCONS_00070783 TCONS_00203184 TCONS_00247351 TCONS_00157719 TCONS_00122016 TCONS_00007513 TCONS_00168027 TCONS_00201188 TCONS_00197443 TCONS_00060496 TCONS_00042304 TCONS_00089514 TCONS_00155178 TCONS_00209311 TCONS_00007522 TCONS_00147942 TCONS_00152912 TCONS_00123385 TCONS_00057758 TCONS_00053909 TCONS_00074381 TCONS_00251066 TCONS_00249932 TCONS_00008259 TCONS_00222513 TCONS_00131305 TCONS_00198856 TCONS_00038786 TCONS_00177341 TCONS_00131141 TCONS_00071094 TCONS_00139133 TCONS_00231806 TCONS_00176771 TCONS_00021486 TCONS_00238489 TCONS_00021272 TCONS_00031427 TCONS_00062764 TCONS_00218815 TCONS_00122034 TCONS_00199781 TCONS_00154276 TCONS_00025106 TCONS_00111181 TCONS_00072626 TCONS_00220614 TCONS_00197537 TCONS_00022660 TCONS_00251352 TCONS_00187644 TCONS_00223815 TCONS_00032678 TCONS_00070115 TCONS_00177252 TCONS_00126153 TCONS_00250005 TCONS_00038668 TCONS_00071563 TCONS_00016726 TCONS_00029761 TCONS_00176171 TCONS_00017324 TCONS_00131292 TCONS_00232354 TCONS_00030353 TCONS_00062800 TCONS_00180081 TCONS_00039827 TCONS_00092660 TCONS_00175103 TCONS_00219991 TCONS_00250225 TCONS_00126148 TCONS_00161889 TCONS_00152861 TCONS_00149896 TCONS_00057483 TCONS_00110316 TCONS_00219075 TCONS_00053908 TCONS_00106694 TCONS_00230750 TCONS_00033595 TCONS_00251933 TCONS_00156593 TCONS_00239619 TCONS_00242449 TCONS_00087257 TCONS_00207853 TCONS_00243121 TCONS_00200402 TCONS_00037907 TCONS_00124848 TCONS_00011085 TCONS_00231545 TCONS_00218275 TCONS_00116046 TCONS_00240553 TCONS_00157220 TCONS_00047461 TCONS_00066402 TCONS_00079430 TCONS_00216398 TCONS_00218274 TCONS_00142098 TCONS_00187545 TCONS_00046959 TCONS_00000220 TCONS_00186785 TCONS_00117722 TCONS_00121538 TCONS_00251591 TCONS_00131331 TCONS_00107559 TCONS_00106693 TCONS_00108328 TCONS_00168787 TCONS_00201052 TCONS_00233719 TCONS_00016725 TCONS_00231737 TCONS_00078822 TCONS_00139134 TCONS_00029762 TCONS_00074923 TCONS_00174047 TCONS_00071014 TCONS_00007111 TCONS_00126150 TCONS_00141382 TCONS_00197030 TCONS_00178271 TCONS_00023659 TCONS_00060492 TCONS_00033373 TCONS_00251805 TCONS_00056889 TCONS_00091757 TCONS_00066161 TCONS_00124548 TCONS_00098597 TCONS_00049295 TCONS_00136864 TCONS_00121530 TCONS_00176989 TCONS_00178365 TCONS_00078868 TCONS_00196654 TCONS_00062030 TCONS_00060491 TCONS_00137275 TCONS_00193498 TCONS_00249379 TCONS_00201183 TCONS_00244513 TCONS_00031814 TCONS_00216429 TCONS_00197569 TCONS_00231952 TCONS_00047643 TCONS_00198595 TCONS_00126142 TCONS_00142555 TCONS_00218278 TCONS_00048090 TCONS_00139138 TCONS_00250850 TCONS_00074918 TCONS_00032866 TCONS_00253648 TCONS_00239779 TCONS_00166405 TCONS_00212973 TCONS_00044804 TCONS_00222162 TCONS_00197502 TCONS_00200394 TCONS_00244519 TCONS_00197472 TCONS_00154208 TCONS_00122041 TCONS_00248933 TCONS_00110351 TCONS_00010478 TCONS_00113431 TCONS_00107708 TCONS_00212791 TCONS_00087258 TCONS_00187671 TCONS_00229705 TCONS_00232579 TCONS_00242609 TCONS_00231696 TCONS_00141056 TCONS_00112928 TCONS_00230779 TCONS_00056972 TCONS_00032256 TCONS_00241201 TCONS_00209026 TCONS_00066197 TCONS_00139135 TCONS_00063300 TCONS_00080170 TCONS_00197353 TCONS_00074922 TCONS_00125012 TCONS_00085919 TCONS_00162467 TCONS_00112183 TCONS_00019107 TCONS_00249934 TCONS_00221465 TCONS_00221751 TCONS_00007370 TCONS_00083610 TCONS_00017658 TCONS_00212975 TCONS_00107373 TCONS_00141391 TCONS_00251765 TCONS_00250266 TCONS_00010496 TCONS_00241119 TCONS_00025135 TCONS_00200828 TCONS_00088359 TCONS_00009103 TCONS_00218279 TCONS_00129731 TCONS_00218427 TCONS_00112892 TCONS_00086569 TCONS_00010238 TCONS_00162492 TCONS_00019475 TCONS_00025243 TCONS_00022390 TCONS_00054167 TCONS_00222321 TCONS_00011422 TCONS_00073448 TCONS_00235443 TCONS_00109902 TCONS_00109822 TCONS_00083374 TCONS_00040497 TCONS_00062760 TCONS_00062813 TCONS_00209884 TCONS_00216393 TCONS_00190588 TCONS_00157769 TCONS_00138043 TCONS_00001358 TCONS_00220928 TCONS_00239299 TCONS_00254911 TCONS_00079522 TCONS_00199826 TCONS_00064985 TCONS_00062758 TCONS_00166021 TCONS_00135762 TCONS_00210080 TCONS_00031872 TCONS_00142180 TCONS_00039240 TCONS_00198897 TCONS_00129697 TCONS_00063196 TCONS_00174045 TCONS_00023496 TCONS_00066198 TCONS_00199862 TCONS_00251193 TCONS_00116491 TCONS_00186084 TCONS_00110439 TCONS_00090243 TCONS_00037771 TCONS_00203085 TCONS_00254888 TCONS_00251157 TCONS_00250616 TCONS_00220658 TCONS_00100004 TCONS_00136737 TCONS_00206563 TCONS_00233467 TCONS_00103051 TCONS_00249266 TCONS_00206965 TCONS_00152757 TCONS_00112084 TCONS_00074591 TCONS_00107767 TCONS_00108677 TCONS_00185631 TCONS_00139136 TCONS_00252712 TCONS_00129690 TCONS_00249145 TCONS_00109794 TCONS_00221660 TCONS_00000219 TCONS_00176157 TCONS_00078427 TCONS_00200361 TCONS_00115895 TCONS_00153040 TCONS_00198653 TCONS_00060497 TCONS_00182251 TCONS_00207922 TCONS_00083373 TCONS_00224140 TCONS_00161829 TCONS_00243949 TCONS_00025022 TCONS_00239740 TCONS_00135779 TCONS_00073363 TCONS_00200481 TCONS_00124596 TCONS_00090615 TCONS_00083607 TCONS_00142948 TCONS_00030261 TCONS_00219110 TCONS_00189178 TCONS_00012100 TCONS_00025136 TCONS_00143295 TCONS_00187817 TCONS_00108980 TCONS_00234231 TCONS_00153915 TCONS_00229872 TCONS_00060490 TCONS_00037665 TCONS_00139131 TCONS_00089421 TCONS_00009350 TCONS_00020727 TCONS_00115001 TCONS_00062029 TCONS_00160911 TCONS_00040676 TCONS_00100573 TCONS_00064146 TCONS_00219257 TCONS_00174046 TCONS_00126152 TCONS_00059948 TCONS_00234531 TCONS_00129595 TCONS_00251733 TCONS_00091653 TCONS_00141269 TCONS_00251355 TCONS_00040374 TCONS_00152934 TCONS_00057238 TCONS_00020069 TCONS_00175208 TCONS_00056666 TCONS_00048726 TCONS_00240081 TCONS_00154456 TCONS_00221284 TCONS_00125302 TCONS_00065262 TCONS_00021121 TCONS_00147918 TCONS_00200294 TCONS_00111450 TCONS_00009115 TCONS_00247350 TCONS_00223346 TCONS_00122302 TCONS_00253150 TCONS_00199526 TCONS_00207051 TCONS_00219856 TCONS_00207420 TCONS_00047669 TCONS_00250959 TCONS_00108256 TCONS_00179625 TCONS_00179444 TCONS_00007222 TCONS_00032222 TCONS_00244525 TCONS_00129756 TCONS_00250423 TCONS_00108035 TCONS_00246552 TCONS_00238701 TCONS_00025023 TCONS_00081014 TCONS_00234353 TCONS_00058074 TCONS_00071191 TCONS_00232761 TCONS_00230736 TCONS_00139139 TCONS_00040871 TCONS_00231651 TCONS_00188029 TCONS_00251149 TCONS_00187209 TCONS_00090481 TCONS_00248828 TCONS_00190633 TCONS_00060489 TCONS_00111818 TCONS_00108320 TCONS_00143199 TCONS_00007010 TCONS_00007622 TCONS_00080011 570 XLOC_036754 XLOC_052448 XLOC_018940 XLOC_149010 XLOC_013439 XLOC_144980 XLOC_065058 XLOC_084810 XLOC_123507 XLOC_041763 XLOC_005082 XLOC_103401 XLOC_065480 XLOC_066257 XLOC_024074 XLOC_034821 XLOC_087497 XLOC_108761 XLOC_053135 XLOC_043424 XLOC_011177 XLOC_092507 XLOC_099345 XLOC_121431 XLOC_140759 XLOC_048222 XLOC_139256 XLOC_053752 XLOC_061189 XLOC_079596 XLOC_014323 XLOC_059017 XLOC_114867 XLOC_002458 XLOC_038098 XLOC_044735 XLOC_013133 XLOC_067073 XLOC_051305 XLOC_094264 XLOC_076197 XLOC_077380 XLOC_128948 XLOC_048385 XLOC_056705 XLOC_008895 XLOC_111819 XLOC_018904 XLOC_005343 XLOC_134405 XLOC_133958 XLOC_017397 XLOC_037194 XLOC_024345 XLOC_064400 XLOC_012169 XLOC_023722 XLOC_046002 XLOC_067840 XLOC_115163 XLOC_035304 XLOC_110809 XLOC_007663 XLOC_043754 XLOC_117107 XLOC_000063 XLOC_006478 XLOC_003346 XLOC_139182 XLOC_088224 XLOC_157566 XLOC_076296 XLOC_065337 XLOC_105295 XLOC_009008 XLOC_115113 XLOC_145255 XLOC_118751 XLOC_048356 XLOC_105985 XLOC_027976 XLOC_037959 XLOC_110264 XLOC_014306 XLOC_142293 XLOC_113640 XLOC_136199 XLOC_113359 XLOC_119618 XLOC_122525 XLOC_059892 XLOC_124936 XLOC_122205 XLOC_149914 XLOC_148558 XLOC_131667 XLOC_134452 XLOC_140851 XLOC_006375 XLOC_032039 XLOC_051996 XLOC_073418 XLOC_144232 XLOC_079983 XLOC_091954 XLOC_113350 XLOC_010976 XLOC_023227 XLOC_125584 XLOC_119616 XLOC_117497 XLOC_132290 XLOC_004199 XLOC_094084 XLOC_053133 XLOC_145158 XLOC_127388 XLOC_154347 XLOC_106774 XLOC_002085 XLOC_046453 XLOC_127595 XLOC_036059 XLOC_037941 XLOC_062257 XLOC_050333 XLOC_095117 XLOC_004291 XLOC_137405 XLOC_034503 XLOC_032049 XLOC_155943 XLOC_066285 XLOC_094606 XLOC_024147 XLOC_007605 XLOC_039045 XLOC_089803 XLOC_015015 XLOC_059676 XLOC_073610 XLOC_009702 XLOC_132933 XLOC_128400 XLOC_027513 XLOC_139512 XLOC_053063 XLOC_091647 XLOC_073806 XLOC_001549 XLOC_005403 XLOC_137450 XLOC_025495 XLOC_126574 XLOC_121062 XLOC_073427 XLOC_002864 XLOC_004931 XLOC_017841 XLOC_153814 XLOC_095053 XLOC_092080 XLOC_045855 XLOC_086832 XLOC_013269 XLOC_092540 XLOC_110993 XLOC_115211 XLOC_134857 XLOC_083318 XLOC_012563 XLOC_085273 XLOC_157826 XLOC_137441 XLOC_002914 XLOC_062871 XLOC_075681 XLOC_143249 XLOC_005958 XLOC_055275 XLOC_024409 XLOC_075997 XLOC_045699 XLOC_145848 XLOC_157253 XLOC_100609 XLOC_001462 XLOC_080045 XLOC_065864 XLOC_105695 XLOC_111830 XLOC_120585 XLOC_036542 XLOC_093087 XLOC_010564 XLOC_007664 XLOC_124657 XLOC_083453 XLOC_017140 XLOC_045488 XLOC_071034 XLOC_110340 XLOC_086945 XLOC_035913 XLOC_058529 XLOC_059760 XLOC_042561 XLOC_124124 XLOC_151307 XLOC_096174 XLOC_073572 XLOC_003074 XLOC_102863 XLOC_122836 XLOC_119104 XLOC_025637 XLOC_054298 XLOC_094662 XLOC_127822 XLOC_003083 XLOC_089827 XLOC_092677 XLOC_074939 XLOC_035555 XLOC_031856 XLOC_046136 XLOC_154009 XLOC_152875 XLOC_003817 XLOC_135822 XLOC_080010 XLOC_120509 XLOC_022607 XLOC_107115 XLOC_079846 XLOC_042867 XLOC_141294 XLOC_106545 XLOC_012159 XLOC_145156 XLOC_011945 XLOC_017675 XLOC_037491 XLOC_132134 XLOC_073590 XLOC_121433 XLOC_094036 XLOC_014669 XLOC_067081 XLOC_044394 XLOC_133931 XLOC_119198 XLOC_013330 XLOC_154293 XLOC_113689 XLOC_137114 XLOC_018918 XLOC_042140 XLOC_107026 XLOC_152948 XLOC_022491 XLOC_043333 XLOC_016019 XLOC_105950 XLOC_079997 XLOC_141839 XLOC_016606 XLOC_037527 XLOC_109851 XLOC_023644 XLOC_056947 XLOC_104886 XLOC_133308 XLOC_153168 XLOC_098774 XLOC_092626 XLOC_091762 XLOC_035281 XLOC_066220 XLOC_132394 XLOC_140240 XLOC_019828 XLOC_154874 XLOC_146284 XLOC_149113 XLOC_052422 XLOC_126368 XLOC_149784 XLOC_122054 XLOC_021736 XLOC_076391 XLOC_006636 XLOC_141033 XLOC_070215 XLOC_147217 XLOC_095679 XLOC_027595 XLOC_041116 XLOC_048315 XLOC_131229 XLOC_086525 XLOC_113590 XLOC_027096 XLOC_112837 XLOC_071888 XLOC_154532 XLOC_080036 XLOC_063469 XLOC_064236 XLOC_103183 XLOC_122702 XLOC_143200 XLOC_141225 XLOC_047709 XLOC_104507 XLOC_042787 XLOC_002673 XLOC_085810 XLOC_118695 XLOC_108044 XLOC_014326 XLOC_019606 XLOC_154746 XLOC_034692 XLOC_056529 XLOC_040878 XLOC_076094 XLOC_058842 XLOC_029426 XLOC_083075 XLOC_106763 XLOC_108138 XLOC_047753 XLOC_118400 XLOC_083485 XLOC_152322 XLOC_122831 XLOC_150485 XLOC_018059 XLOC_131237 XLOC_119230 XLOC_141440 XLOC_027775 XLOC_120249 XLOC_086980 XLOC_028222 XLOC_153793 XLOC_019102 XLOC_156587 XLOC_146444 XLOC_101243 XLOC_130297 XLOC_026271 XLOC_135471 XLOC_119163 XLOC_122046 XLOC_119133 XLOC_093969 XLOC_073597 XLOC_151876 XLOC_066255 XLOC_006029 XLOC_069031 XLOC_063618 XLOC_130256 XLOC_113716 XLOC_139199 XLOC_142064 XLOC_149272 XLOC_141184 XLOC_085484 XLOC_068823 XLOC_140269 XLOC_034775 XLOC_018496 XLOC_147865 XLOC_127537 XLOC_040914 XLOC_038027 XLOC_049054 XLOC_119014 XLOC_076555 XLOC_099348 XLOC_068080 XLOC_009787 XLOC_152877 XLOC_134779 XLOC_135063 XLOC_002931 XLOC_009078 XLOC_063283 XLOC_085819 XLOC_154706 XLOC_153209 XLOC_006047 XLOC_147783 XLOC_014679 XLOC_122479 XLOC_053146 XLOC_004659 XLOC_078444 XLOC_131747 XLOC_068787 XLOC_052184 XLOC_005790 XLOC_099373 XLOC_010154 XLOC_014707 XLOC_013060 XLOC_031976 XLOC_135630 XLOC_006973 XLOC_045213 XLOC_065806 XLOC_065726 XLOC_051245 XLOC_024313 XLOC_037487 XLOC_037540 XLOC_128395 XLOC_116623 XLOC_096224 XLOC_084252 XLOC_000334 XLOC_134244 XLOC_145965 XLOC_157843 XLOC_048407 XLOC_121478 XLOC_039709 XLOC_037485 XLOC_100861 XLOC_081985 XLOC_128591 XLOC_018117 XLOC_086605 XLOC_023058 XLOC_120550 XLOC_078410 XLOC_037923 XLOC_014163 XLOC_121514 XLOC_154136 XLOC_070658 XLOC_112137 XLOC_066343 XLOC_055024 XLOC_021600 XLOC_124102 XLOC_157820 XLOC_154100 XLOC_153559 XLOC_133975 XLOC_060247 XLOC_082948 XLOC_125085 XLOC_142949 XLOC_062002 XLOC_152209 XLOC_125485 XLOC_092522 XLOC_067981 XLOC_046345 XLOC_063677 XLOC_064582 XLOC_111684 XLOC_155653 XLOC_078403 XLOC_152088 XLOC_065698 XLOC_134973 XLOC_105936 XLOC_047315 XLOC_122013 XLOC_070064 XLOC_092805 XLOC_120307 XLOC_126437 XLOC_137436 XLOC_098714 XLOC_150314 XLOC_014641 XLOC_146405 XLOC_082002 XLOC_045128 XLOC_122133 XLOC_076140 XLOC_055395 XLOC_087373 XLOC_016515 XLOC_132429 XLOC_115217 XLOC_007650 XLOC_087717 XLOC_113860 XLOC_064885 XLOC_143710 XLOC_093677 XLOC_139366 XLOC_021495 XLOC_054206 XLOC_004906 XLOC_011402 XLOC_069415 XLOC_097804 XLOC_024492 XLOC_060815 XLOC_038872 XLOC_132576 XLOC_144009 XLOC_078308 XLOC_154674 XLOC_056426 XLOC_085697 XLOC_154296 XLOC_024190 XLOC_092699 XLOC_035037 XLOC_010747 XLOC_104991 XLOC_034469 XLOC_028857 XLOC_146746 XLOC_094216 XLOC_134600 XLOC_076844 XLOC_039983 XLOC_011794 XLOC_121946 XLOC_067350 XLOC_004671 XLOC_136647 XLOC_073857 XLOC_156091 XLOC_121179 XLOC_125570 XLOC_133173 XLOC_125936 XLOC_027801 XLOC_153902 XLOC_064164 XLOC_109397 XLOC_109217 XLOC_002784 XLOC_018463 XLOC_078469 XLOC_153366 XLOC_063945 XLOC_151020 XLOC_145368 XLOC_049896 XLOC_143831 XLOC_035871 XLOC_042963 XLOC_142245 XLOC_140226 XLOC_024685 XLOC_141139 XLOC_114072 XLOC_154092 XLOC_113257 XLOC_055262 XLOC_151771 XLOC_116668 XLOC_067718 XLOC_064228 XLOC_087621 XLOC_002572 XLOC_003183 XLOC_048895 Coding TCONS_00174046 XLOC_104507 Coding Coding ACOT11 3:92272943-92301505 j TSS129250 2521 3 TCONS_00174046_1 173 0.621975406584689 6 0.911942859143587 0.00313852133306947 0.00241231307203616 0.00230883940516261 0.00159272568936213 0.00165674058503331 0.00100103160310711 0.00134173782270352 0.0012934930535564 0.00180587561802444 0.0026758852678101 0.00171937966131285 0.00160249265132579 0.000709789345247976 0.00254066937106549 0.00190086311249893 0.0184614017106363 0.00807425195500976 0.0153722935871053 0.00358905129998192 0.00352117986384747 0.0015838623582098 0.00702937393908806 0.00496394307860696 0.00695674420836092 0.00286775024648844 0.00389072437791536 0.00373749856577436 0.00284008752174211 0.00233302416593925 0.00532492302341169 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 4475 100.00 0.983736612455375 XM_005270732.1 ACOT11 PREDICTED: Homo sapiens acyl-CoA thioesterase 11 (ACOT11), 0.0 774 90.05 0.225704085680286 TCONS_00174046_1 sp|Q8VHQ9|ACO11_MOUSE ACO11_MOUSE Acyl-coenzyme A thioesterase 11; 1e-108 327 92.26 0.965317919075145 1 coding 0 0 0 0 -0.00915018249092775 0.944016596621234 -0.0217543626755451 0.647572856388768 GCCTCAGATTTACAGCATACTTCAGGGCTGAGCCAAACCAGGGCCTGGCCTCCGTGTTCTCCAACCGCACGTCCCGGAAGTCGGCCTCACGCACTGACAGCGACAACATGGCAGATGGCGAGGGCTACCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGTGCTGCCCTGCCACACCAACCAGCGTGGCGAGCTGAGCGTCGGGCAGCTGCTCAAGTGGATCGACGCCACCGCCTGCCTGTCCGCGGAGAGGCATGCAGGGTGCCCCTGTGTCACAGCCTCCATGGATGACATCTATTTTGAGCACACCATTAGTGTTGGACAAGTTGTGAATATCAAGGCCAAGGTGAACCGAGCCTTCAACTCTAGCATGGAGGTGGGCATCCAGGTGGTCTCCGAGGACCTGTGCTCTGAGAAGCAGTGGTGTGTGTGCAAGGCCTTAGCCACCTTCGTGGCCCACAGGGAGCTCTCCAAGGTGAAGCTGAAGCCAACTGTGCCTCGGACCGAAGAGGAAAAGACGGAGCACAGTGTGGCGGCCGAGCGCCGGCGCATGCGACTGGTCTACGCAGACACCATTAAGGACCTCCTCGCCAACTGCGTCATTCAGGATGGTGAGCGTCATGGGTAGGGAGGGCAGCTCGTGTCCTACATGCTCCCCTCTGTCTGGGGCTCCTACTGGGCAGAGAAAGGAAGGAAGTCTCCCTGGAATATCCACCCAGTGATGGCCTCAGGCCTGGATAACACTCTTGCCTCAAGGTCCCTTAGTGGGGAAAAGGGAGCATTTGGACCTCTCGCCCAGCTCCCAGGAGCCATGAAGATGAAGCTGGGACACATAGAAAACAGTTTGTCATCCACTAAATGCATTTGGGTCTCTAGGAGTCAAGGTATTTGGGAAGGTAGTATTGAGCTTGGCCTTGAGGACCCTCAGTTCAGTCGCTCAGTCATGTGCAACTCTTTGCGACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAGCTCCTGGAGTTCACCCAAACTCATGTCCATCGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTTGTTCCCTTCTCCTCCTGCCCCTAATCTCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCCCATGAGATGGCCAAAGTATTAGAGTTTCAGCTTTAGCATCAGTCCTTCCAAAGAACACCCAGGACTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACTACAGTTCAAAAGCATCAATTCTTCGGCACTCAGCCTTCTTCACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCCTTCCAAGGAATAAGCATCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCCAAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCTATGAAGTGATGGGACCAGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTCACCTTCATCAAGAGGCTTTTTAGTTCCTTTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATAGTCCTCCCGGCAATCTTTATTCCAGCTTATGCTTCCTCCAGCCCAGCGTTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAACATACAGCCTTGACGTACTCCTTTTCCTATTTGGAACCAGTCTCTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATATAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGATATTCCCATCTCTTTCAGAATTTTCCACAGTTTCTTGTAATCCACACAGTCAAAGGCTTTGGCATAGTCGAGAAAGCAGAAATAGATGTTTTTCTTGAACTCTCTTGCTTTTTCCATGATCCAGTGGATGTTGGCAATTTCGTCTCTGGTTCCTCTGCCTTTTCTAAAACCAGTTTGAACATCAGGAAGTTCACGGTTCACGTATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCAGTCGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGAAATGAAAACTGACCTTTTCCAGTCCTGTGACTACTGCTGAGTTTTCCAAATGTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCGTCATCTTCTAGGATTTGAAATAGTTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTTGTAGTGATGCTTTCTAAGGCCTACTTGACTTCACATTCCAGGTTGTCTGGCTCTAGGTGAGTGATCACACCATCATGATTATCTTGGTCATGAAGATCTTTTTAGGACTTAAAAAAAAAAAAAAAA EMBV3_19219 GGGTTGACCCCTCCTTATTCTCCAAGGCATGTACAGTATTTAGTCCCAGCAGCAGTGAAG Gene GeneID:536838|SLC35A1:NM_001034637:29_cdna Constitutive 0 NULL GeneID:536838 9 GENE SLC35A1 MGC127186 solute carrier family 35 (CMP-sialic acid transporter), member A1 EMBV3_36178 CCGACCAATGGGCATTTAGTTCACTTCCCCTGTTTTGAAGCAAGGCACAATACTGCAACG Gene BVT0102_181311 - 1 EMBV3_42064 GK000018.2:62397565-62406976 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36097 ACTTCCACGACGTTCAGGATTATGCAGACAACGAGCTCTTCCAGAAAGTCGCAGAGGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37149 CTCTGAGTCTGTGCAATCATTTTCTTGAGAAGCATGGGGAAAGGTGGTAGACTGCTGCAC Gene BVV0102_086478 + 0 NULL GK000002.2:90005372-90020262 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105786 TCONS_00105788 TCONS_00105785 TCONS_00105789 TCONS_00105787 TCONS_00105784 1 XLOC_062639 Coding TCONS_00105788 XLOC_062639 Coding Coding FAM126B 2:90013188-90077663 j TSS77967 9505 1 TCONS_00105788_3 586 0.0149395055234087 14 0.85279337407327 0.00182026837341511 0.00179839280019235 0.00119688796625611 0.00184526437719283 0.00162018215055257 0.000148946192935829 0.00207707272931093 0.0020989651183438 0.00345526143831272 1.28192473810826e-05 2.73648248904333e-05 2.93214366789011e-05 0.000641389557097402 0.0011355917442325 0.000735226527072891 0.000238841431794657 2.89049455911558e-14 2.89922135446387e-07 0.00181716469988925 0.00144364079259274 0.000209978945038643 0.000390980776009189 4.0370344229323e-05 0.000246813795025735 0.00213330058751588 0.00200050797719614 0.00148180089760101 0.000118281520179265 4.71603264810184e-05 0.000109831025601814 XM_005197499.1 FAM126B PREDICTED: Bos taurus family with sequence similarity 126, member B (FAM126B), transcript variant X1, mRNA. 0.0 1.645e+04 100.00 0.959284587059442 XM_005246474.1 FAM126B PREDICTED: Homo sapiens family with sequence similarity 126, member B (FAM126B), transcript variant X1, mRNA. 0.0 5395 88.41 0.443766438716465 TCONS_00105788_3 sp|Q8IXS8|F126B_HUMAN F126B_HUMAN Protein FAM126B; 0.0 1021 86.69 0.998293515358362 1 coding 0 0 1 1 0.216128702381625 0.4004231827252 0.0145496745728594 0.749197524643585 GTTGGAGCGTGGAATCACCTAATGAGAGGGCGGGTTGTTGCGCTGCAGTTGGCAGGCTGCTGCGGGAGGCGGTGGCGGTAAGAAGCCGGAGGCAGCGGGGTGACAGGGAAGTGGAGACGCTCAAAAATCTATAGCAGAAGAGTTGGAAAATATTTAAGTCTCAACAAATGAATTCCATACTTGAACTCTGCTGCATTCCTGTGCCACCTCCTCCATTAGAACACTGATCTTACAACAGAGAAAAGAGGAATAGAAGGTAGAAGAAGATGCTGGGATCTGAACGTGGTGTTGTGGAAGAATGGTTATCAGAATTCAAGGCATTACCTGACACTCAGATCACCAATTATGCGGCAACTTTACACCGGAAAAAAACACTGGTACCAGCCCTCTATAAAGTTATTCAAGACTCAAATAATGAGCTCCTGGAGCCTGTCTGCCACCAGCTGTTTGAGCTCTATCGTAGCTCTGAAGTTCGACTTAAGAGGTTCACACTGCAGTTCTTGCCAGAATTGATGTGGGTTTATTTACGGCTTACAGTTAGCCGAGACAGACAGAGTAATGGTTGCATTGAAGCACTTCTGTTAGGAATTTACAATTTGGAAATTGCTGATAAAGATGGAAACAATAAAGTTCTGTCTTTTACCATCCCTTCCTTATCCAAGCCGTCAATATATCATGAGCCCTCCACGATTGGATCCATGGCCTTGACAGAAGGGGCATTATGTCAGCATGATCTCATCAGGGTTGTTTACAGTGATCTTCATCCTCAGAGGGAAACATTCACTGCACAAAACCGGTTTGAAGTCCTGAGTTTTCTCATGTTATGTTATAATTCTGCTATCGTGTATATGCCTGCTTCATCTTACCAGTCTCTTTGCCGAATGGGCTCCAGGGTTTGTGTGAGTGGGTTTCCACGGCAACATGAAAAACAGTGGAAAGAACTCTGTGGTCGAATAGTGTTGGATCCCGAATTTATGGTGCAGCTTCTCACAGGAGTTTATTATGCCATGTATAATGGACAATGGGACCTTGGCCAGGAAGTCCTTGATGACATCATCTATAGAGCTCAACTAGAACTCTTTTCTCAACCACTATTGGTTGCCAATGCCATGAAAAATTCATTACCATTTGATGCTCCTGATTCTTCACAAGAAGGCCAGAAAGTACTTAAAGTCGAAGTCACTCCAACAGTGCCGAGGATTTCTCGGAGTGCGATTACAACAGCTTCAATCCGTCGCCATAGATGGAGGAGAGAAGATGGCTTTGACTTCTCAAACGAGGCTGACTCGAGTATTCCTGGCTCCCCGATCCAACACGGCTCCACTGACCTAGGGATCAAACGTGTGCAAGAGGGGGAGGTGCTGGTGCACAGGACTCCTGAGCACGGCTCACCGGAGCCCAACTCAGCAGCAGCCACAACAGAGGGTGCTGAGGGTATAAATGGAGGAGAGGAGTCGGTAAACCTGAATGATGCAGATGAAGGATTTTCATCAGGGGCTTCCCTCAGCAGCCAGCCAATTGGGATCAAACCATCCTCCTCTTCTCAGAGGGGAAGCTTAAGGAAAGTAGCAACTGGGCGTTCAGCCAAGGATAAAGAAACAACTTCTGCCATCAAATCCAATGAGAGCCCTCGAGATTCAGTAGTTCGCAGGCAGTATGTACAGCAACCAACTGATCTTAGTGTAGATTCAATTGAGCTGACACCGATGAAGAAACACCTGAGCCTGCCTGCTGGCCAGGTGGTGCCAAAAACTAATAGCATTAATCTAATCCGGACAGCCAGTGCTTCCTCAAGTAAATCATTTGACTATGTAAATGGCAGTCAAGCAAGTACCAGCATTGGGGTTGGCACTGAGGGTATTACTAATCTAGCAGCTAACAATGCTAATCGATATTCAACGGTCAGTCTACAGGAAGACCGGCTAGGTCAAGCTACAGAAGGTAAAGAGCTCCTCAGCCCAGGAGCTCCCTTAACCAAGCAGTCTCGATCCCCAAGTTTCAATATGCAGCTAATATCCCAGGTGTAGTCTTGATATCCTCTCTCTCATCTTTCTGCTTATCTTCTAGACTGAACATTTCATTGTGCAAGAAGACACTTCATCCCACATTGTGAAAACATTGGTAATCATAAACAGATCTGATTTAGTTTAGGTATCTTCATACTGTATTTTGTATGGAAACAGCAATAAGGTTTTCTTTTCTCTCTTTCCTATATCGTCTCTTCACCTGTTCCTTGTAAACGTATTTGTGAAGCAGTAGAAAATGTTCGCGTTTTCCACACCTTCGTTTCTCCTTGGGTGATGTGCAATCCATCGTAGGCTGATCGGTCCCATTTCAACACTGTGAGACTGAGGTTATGTTAGAGGAAATGGTGTATATGATCCCTATGAATGATACTTCGGCTTTTGTTTAAAAAAAAAAAAAAAAAAAACGGGTTTGTTCTCATAATCTGTAGAACTATGAAGATAACTGGATCATATTTTTTCTCTCTTAACCAGGAGTGCCTCAGAGATTCTGCTATGACTTTGGACTTCTCTGAGTCTGTGCAATCATTTTCTTGAGAAGCATGGGGAAAGGTGGTAGACTGCTGCACTTTTTCATTAAAATGAGGGTGGCTCTTTTTTTCCCCCATCTCCTTTATCTCGAGGATACAATGTTCAATTACTGAGGCATTTGAATCAAGTTGTGGCCACCTCTGTTGGAGGACAGGGCTCTAAGTTGATTGTGTAATAGATAATGCACTTTCTCAATGGCTCTATAGTCATTATTAACATGTCTTCCCTCCTCCCCACAGGGACATAAGGTCATTTCTGTCCTTTGAGTTTGAACAGCTAATAAATCAGAGAATCCAAGGGGCTTGTTCTATTTCCCAGGAATGATTGACACTTCGGTGCTGGGGTTTTATGGGGGGAGGGGGCAGTTTCTGTTTAGATTGTGTGGAATTGTTTGTGTGAGGGGAAGTTTTGATTGTTTTTTTTTTTTCTTTGTGAGCTGATGATGACTGAAGTAGAACAAGTACGTCTTCAGGTAAAGAGAGGGATTTCTCAACCCACTTTCTATGATGTCAGATTATTGGAGAAACCCTTTCAGCTGCTTTCTAGATGTACCTAAATTCAGTCAGATATTTTGGATTAAGAAACCTGAAGTCCTGATAGGTCATATACTCCAAGGAAATACATCAGGGACAGATAATTGGCTGAAAACACTGACGCTTCAATGTGACACATTTTTATAGAGCATTTCTACCAGGGGGTACTGACTTGATTTCTCCTACAAGGACCACACTGCCTTTGTGTTTAATGTAATGCAATTTGTGTACCTTCTAATCATATATCTGCAAAAGTTCTCATTTTTATAAGTCTTTGAAATCATGCCAGTAAGCTAGATGTTGAATGTATGTAAGTAGCTTTTGGTAACTGTGCTAAGAGGCTATGAAAATGCATTATTGGTTTTTTTAGAAATTATTTTTTTTTAGTTCTGATTTGGTTGGATAAGATTTCATTATGAACTCATCTGGGTCCCAGGCTCTAATGCTTGATTGAAATAGAAGAAAATATATTGGTTTTTGAAAATCAGTGTATCATGACTTGAACTGCTATACATTCTTCCACACAATATTCAGAGCGATGAATACTTTGTACATTTAGACATTCTTATTTTATTATTGTAAAAGAAAAATATACTGAATTTACAGAAAGCAAGTATTCTCCTAATTAACAAAGTTTGAAATATTACCTCTACTGATTAAAATTCCAATAGATTTTGATAAAATAACCAGAAAAATGCTTCTCATTTTTTCACATCTTAAAATCCAGCCCCTTCCTTTTTATTGTAAGAGGTTTTTATTTTGGGGGGTTTTGTAAGGTACTTTCTGTTAGAATCTTTATGAAAACAGTGAGATGCTTGTTTGAATTTGGTGGTGTGTAATATTTTTCAGCTCATATGAAAATGGAAAACTAGGACCTGAACTATTACCTATAACATTGCCAAAGTCTGAAGAAAAGCTAAAAGTTGATAAATAGAGATTTATTGATTTGTGTATATATATGTGTGTGTGTATGTGTGTGTATATATATTGTGTGTATATGTATATATCACAAAGACATATTTTAGATATCTTTTCTTTTAATTTAACTAAGGGATGTCAGATAAATGAATTAAAAGCAGCCAAATAAATGAGGTGTAAAGATATATAACATAATAAGGAAAGCAAAGTTTCAGGTATGAAAAGAAAAGAGCATTATACTTAACAGGAGGTAAGATCTTGACCATGGCTGGAGATCAGTCACTTTATGGTAAAACTGCCTGGTTGATTTAAGAGGCTGAAGGGTTGTTTTTAATTTAGCAAGTTGTACATTTATTGGCACCTAAATCTAGCATGCTTATAGTTATAGCACAAAAAAAACCCCCAAATAATACCAAATTTACAGCAAGAACTGTAAAAGACATAATAAACCCTTTGTCTGATTTGTTAGAAATCTTATGTTACACTTGAAAAGCTGGTTTTGAAAAACTTTCAACTTAAAGGATTTCATGTATCTATGTGTATTCATATATATTTTGTACATACATATATCCGTTAATGTTTCATGACCCTCTAACATTTGTGTTCCATTCTTTTAAGTGGTATAATTTGGCCCCAAAGAAGAAATATTTCATTTAGTTCAAATTTTGCATTTGGTGTCTTAGAACAGATTTCCTGTGCAAGATATAGTTAAAATGGAATGAGTCAGTCATAAACCATAGTCACATTTTCTAAGAGATTTTTAAAATATTCATTTGCATTATTGCATTTAATGTAAAATAATTTTCAGATATACAACTGTTACAAATATATGCCAGCAATATTCACGCTTTATCCTTTAACAACTTTTTGTTTTTATACTTCCTAACTTCCATTTTAAAAAGTTCTTTCATTTATGGACAAGCTAGTTAGGGTGAAAATACTTGTTTTCTATAATAAAACAATTTGATGTTATCTATGCCAGGTTCAATTAAGAAATACAAGGAAATTATCTGCAAGTTTTGAGAATTCTTCTCTATGATGTTAATTTGAAATCATGTTACTAGAACACATATATATTTTAGAACAAATCAAGTGTAAAATGAAAGCTAGCTTAGTAGTAAGATTTTTAAATATGAAAATATTTTGAGAAGCTGCATGGGAGCATGATGATTGTAATTTGAAATCCTGATCATTACCACTAGTCTTACCTTCCCAATGATTCTCCTGTGCCTATTTATTATAAAGTCAATTTTTTTGTTCTAAAGAGACCATAGAGATAATCTAGGAGTCTCCCAGCACCCACTCCTTCATATCCATTCTCAGGAAACTGAGGCTCAAAAAGGTTGTAATGTGCTCAAAGTCACATAACTTAGAAGCAGAGCCAGAGTCAAACTCCTGTCTCCTGTCAAATGCATATTAACACCCCACTGCCTCCTTTCACTCATCATATGGTGAGTGTGGTTATGGAACACACTCCAATTCTGCAATTTCTTTACAGTTTGGGTCTAGTAGTGGTGAATATAGCACATTAAGAAAAGTATTAAATCCAGAGAAAAATGTAGAGTAATAAACATAGATGGGGAAGGATAGATACATTTTTCTTACTCTAATTTATGCCTTACTGTTTTCTGCCACTTAACAATTGTATGCTGCCATTTTATAGTTTATTATGTTTGGGGGAATTTATTTAAATGCAAAAATAAACCCAGCGAAAATGACTTTAATCGGTGTTTCTAGCTATCTTAAGAAATTTTTGAATCAGCCAGCTTTCACAGTCACCTAGGTGGCAGGTTAACTGTATTGCACAGTGTAGTATTGCAAAGTAAAGATAAATTTGATTCCATAATTTCTCATGTAAAGAGATTGAACCTTGTGCTCAGACCAGATAGATAACAAGCAATTATTTCCTTCTGTGATGGAAAAAGATTTATAGTGAAGCTTATGGTTCCATAACAGAATGGTGACCCATGTCATCTAAAGTGTATATATGGTATAAAATGTCTTAAATGCGATAGTCCCAGCTATATAAGCTCAATATTTCCAACCTACATTTTCAAATTCCACTTGGTAGCTTTACTGAAGTACTGAGAATAACTCCTTTTAAGTTTTGTTTGCACCATTTTTGTGACTATTTTAATGAAGTGGGGTGTTTTTCCTACTCGGACGAGTTAATATGGGTCCATTTTTGAGTACTTTTAATTGTTGACAATCAGTAAGTCTCATTTAATTCTCTGCATGTTCATCTGTAAATAAAAATATTAGTACGTATCTTCAGTGGGTAGTACACTATTTATACAGACACTAGCAAGGAGGCTCTCTCCATTTCTGATCTTGGAATTACAAAGTAAGTTTTATGGTTTTGCTTTTTAAAAATCAGTATTTCAGTTACATACTTGTTTTTTAGTTTAAAAATGTTTAATAAGTCATGACAGTGGTCAGAAAATCTACAACAATTTTAGAGCAATTTTTTCTATACTATGGCTATGTAAACAGTCTGAACCTGAGACTTTTTATCTTTCAAGTTGAATGATTATTGTCATGTTTCAAACCACTAAGTCGGTTGAGACACTTATTTGTAAAAATACTTTAATTTTTTAAAAAGTGCTTTTTAGAAACAAGCTGTTTGAAAATCAGCTAGAAATAATTGATAGCTTAAACTCTAAATGTTAGAATATTTGCCAGATTATAAAATGGGATGCAGTATAAAATTGTTAACAGTGCTAAAAAAAACCCAAGAGTCACCAGATTGATACAGCTTTCCATTGCCAAGGTGGTCGTGTTGATAATGTAAGACATAAATTTTAGTATTACCTACATTGTATACCTAATGGGTATATCATATTGGCACTGAACATATATAGGAAATACTATTTGTAGAGTCAACCAATGTGCACTTAAACTGTTGGATTTTTGGTGGTGCCAGAAATTTGTGTGGTGATCCCAACCCATTAGAATTAGAGGAGTCATATAATCATCCAACCTTCCCCTGCCCATGTAGGTACATTGCTTCTGAACCTGACCACATAACCACAAAATTTAACTTCAGTCTCTTCAGTATGTTTATAATCTTAGCCATTAGTCACACGAGAAATAGAAGAGCAAACAGTTTAGGATAGAAGTTAGCAGGTAGCTGGCAATGATGTGAAATAACTGGCAGCATAGTACAGGTACATAAGTTCTATGTTTTGTTTCTGGATTTTGTGAAAATGTTTACAAATTAAGTCATATTCAGATGTCTGCTATTATGCTCTTCTGTTTAATACAGATTTTTACACCCAAAATGAGAATTAGGCATAGCTTAAAGTATAAATGAGTCTTTTTTTCAGAATTGTGTATCTGAAGGTAGGTTTAGTAAAGAAAGTCTTCTGTTTTCAAAGAAAATGAACTTAATTGGACAGTCCATCCCCAACTACAGAATTCATATCAATCTGGTTTGCTGTATTTGAGTGTCAAAAGTGTAGTGTTAATGATATCAGAGGAAATTGTTCACACCTTCATAAACTACAAAAGTTACCAAAGAAAATGAATCAACCAAATATAAAATTTGAAGTACCTAACTGTTAAGGAATGAGGCCCCTTCTAACATGAAAGATTGATTTCTAGCCCTGGAGGAAATATTCTTCCATATGGAACAGATATACAGAACCTACAAGATTCCATTTGAGGTTTTCTTATCATGTTGGTAAAATGTCAACATTTATACTTCCAGCAAAAGTACCAGTTAAGGGTCAAGTCCAAATATTATTTCTTATGGCAAATTTTCATGTCTCCTTAATTCAAATTAAGGATTTTGCTCATCAGTATTAAATAAAAGGGGGAGAGAAAAGAATTCCTGTAATTGGTATACTGTATAATATTGTGACTTCCTAAAAAAATTGAGGGTGAATTATAGAAATGTGTATTTTAAGTGAGCAATGTCAGTTATTTCTAGTAAGTATGATATTGGCTAAAACTATGTTTGTTTACATAATTTATGTACTCGATCACTCTGGGTATTTTTTTTCTTCGCAGAAAAACACGATTGGGTTAAGAAAAGTTAAAACACTTATTTTTAAAATAGTTCAGTAAGCACTAAAGAATTTACTTAAACTGTTAAATAATGATTTGGGGGGATATGAATTTATATATTACCTGATGTCCCAAACAGGCTCTATGTATTATTTTTTTTATATCAGATAGAAGTTAAAAAGTAATGGATGTGTTGATCTGCTATCTTAGAAAAGATTGGCTTTCTAACAATTATGAACGTCGGTTTTTATGTTTTTTTTAAGTTTTATCATCCAAACTGAACTGAGACATATACTAAATGTTCTTTGTGTTGTTTTAAAATATTTGTAAGAAGTTCATTAACTGCTTTACAGTGGTTACAGTGGTGGTTTTTTGATTCTTATTCTAAAACTTATACTGGCTTTACATTCAGTTTAACTGGTTAAGTGAAACAGTTTTTATGGTGCAAAGATAATTTTCCCACTTTGTCATCATAATTTGACTCTCCTGACCTATAGTTTCTAAAGAGTTTTTTACTACTGTAACATCATGTATCTGATCTCTGTCACAATGGACAAGTATACAGGAAATATCCAACTTTCATATGTTTGCTTCAAAAAGGTTACAGGTTGAATAGGTCAGCTCTTATGTTTTTGTTTCTTAACCAGCATCAACCTATATAGCTTGGTGTAAACTTGCCAAGTATTCAGAGAATAGTGCTGGTTAAAATTTAAATATGATAGTCAGGAAGAAAATATGATCTCTATTGACTGATGTCCTTTCAAACTAGGACTAGTGAAAACATTTTTTTCAGAGCTGAAGAAGAAATGCACATTTAAGATCATATTTATTGGTGCATGTAAGCCATTATCTTAACTGTCTTACTGAACTAGTTAATGCTGTTGATTGTTGAAATGTGAAATGTAGTCACTGTTGACCTTGTAAATATCTGCCAGAGATGAAAAAATATTTTAAATTATAAATAAAGATGTATAAAATTCATTATCAGTCTGCAATGCAGAAACATATCTAAGATGTTAAATATTGTGTTTCTTGAGAAATGTGTAATTTTTCCCTAGATGTATCTAGTTACATTAAGGATGTAAATTTTCTTTTGTACAGTATAAAATACAGCTTTATTTGGCTTTTGACTGGATTTTCCTGAGTTAATTTATATCATACCTAAGTTTCATAGCTTAAAATGGTCCTTCATTGCATTTTTCAAAGCATGCAATTTTATTCATGTATGTCTGAAGTTTTTAATTTATACGATACCCTGTTAAGGAAATTTAGGCAAGATATAAAATTACATATAGCACCCAAAATAATAAATAACATGTAGGCAGGAGTGAAATTAATACATAAAACATGTGTCAACATTTATGTTACTGTTGAGGTACATATTTATCTCTGAACTTTAAAGCAGCCAAAGAGAGAGATTAACAATGTGATTTTGAGATATCCTTAAGATAAATCAGTTTCCCAGGTGAAGCACAACTGTTTCTAGTACTG EMBV3_30725 ACAGCCGCAGTTCATTCCTACAGGGCCAATACTGTGCATGGCACCCGCTTCAAGTGTTGT Gene GeneID:540550|MBNL3:XM_002699535:18_cdna Constitutive 0 NULL GeneID:540550 X GENE MBNL3 NULL muscleblind-like 3 (Drosophila) EMBV3_37852 GGTCAGTGTGCATTTGTTTTAGTTTTGATGCTTTTAAAATTACATTTTTTTTTTCCTCCC Gene GeneID:510194|HP1BP3:NM_001075436:120_cdna Constitutive 2 NULL GeneID:510194 2 GENE HP1BP3 MGC142335 heterochromatin protein 1, binding protein 3 EMBV3_09893 ATTCCAGGGCTGGAGGCTTCTAGGATCAAAGGGATGTTCCACCTGGAATTAGAAATATTA Variant GeneID:783025|SPAG11B:NM_001098154:8_cdna 362^492 2 EMBV3_30875 GeneID:783025 27 GENE SPAG11B NULL sperm associated antigen 11B EMBV3_39992 GGGAGGCATATTTGGGAAAGTGAAGGAGCGGGAGCCGGAAATTGACATATACGACATCAG Gene GeneID:783491|LOC783491:XM_002699539:29_cdna Constitutive 0 NULL GeneID:783491 X GENE LOC783491 NULL similar to hCG2038260 EMBV3_23000 TTCCTCCCTGCCCAGCAGCCAGAGTGACCTTTCAGCAAACACAGATGAGGCTTCAACAAA Gene BVT0102_316032 + 0 NULL GK000019.2:34693037-34709555 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099749 1 XLOC_059992 NonCoding TCONS_00099749 XLOC_059992 NonCoding NonCoding - 19:34700137-34701281 - TSS74125 1144 3 TCONS_00099749_4 124 0.301573426573427 1 0 0 0 0 0 0 0 0 0 0 3.95624461979631e-05 6.00309657500799e-06 0 0 0 6.86180990301817e-05 0.000346305551125971 0 0.000219326266733332 2.50732142263006e-05 0 0 0.000505953717078075 1.6038547410548e-05 0.000175852712938247 0 0 0 0.000134337840064362 0.000182471896442299 0.000704231876833584 XR_228693.1 LOC101902854 PREDICTED: Bos taurus uncharacterized LOC101902854 (LOC101902854), 0.0 1216 100.00 0.588286713286713 0 noncoding 0 0 0 0 0.251756154174364 0.246047077023964 -0.0941954044690335 0.219166831017998 GTCACTGAACTACAGTGTCTCGGGTGACAGGCCCCAGGCATGGACCCAAGAAGGGCTGATGGGGGAGGAGGTGGTGATTTTCCATGGAGTGATCAAGAAAAGCCAGCCAAGATGGTGACCTTGGAGCAAGGACTTGAAGGGGTGAGCGGGAAGGAGCCCCATGTGGACGGAGCAGCAGGAACAGCATTCTGGGCAGATGGAACAACAGACAGAGCTCAGAGGCAGGGTGTGCCTGGCCTGTGTGAGAATCAGCCAGGGGGTGGTGATCGGGACGACTGCTTGCTGCCTGGTCCCAGCTGCTGTCACTTCTCACCAGGACCCTTACTGTCATCACTGAGTCACTGTCCTCTTAGCCTCCTCTCCCTGCTGTGACTTCCTCCCTGCCCAGCAGCCAGAGTGACCTTTCAGCAAACACAGATGAGGCTTCAACAAACACAATATGGGTGTCCCCATCTTGTGGGATCAAGTCCGCCCCAGGCCCGTGAGGCCCTGCTGGTGGAGAATGGAGGACAGATGGAGGAAGTGGCCTTTGTGATGGGACTGGCTGCCTGGAGGCCAAGTGCAGGGTGTGGTGGCAGCCCCAGCTGTGGTTCCTGTGAAGTCATCCCCTTTATGCATCTGCCTGATTTCCTCTCTCAGATCTGCTGGAAAAGCCCCGAGGAAACCACTAATGGGTATGTGCAGCCCGGGGTGGTTGGGGTGTGGGTTTTTGGGGAGCGGGTGGTGGGAATGCTCCCAGGAGGAAGGGACTGGCCTGGGTGAGCTGCTCAGCAGCAGTGTGGCCCTGCCCCTCCTCTGGCACCTGTGGGTGGGGCTGCAGACAAACACAGGAGGCCCCACTGTGCTTGAATTTGGAGGTCCCACCTGCGTCCTGTGTTTTCCTTTGCTGAACCTGGCAGCCCTGCAGGGACCACATGCGCCTCCACATGGCCTCCCGGCTACCCTGGCCCCAGGTCTCGGCCCCATGTGGGGACCAGAGACGCCTGGTGAAAACCCAGTGGCTTCACATCTCTCCTGGGCTCCCCCCAGTACTTGGAGGCCTTGATGACCTGCGTCGTGTGCACTGTCAACCCACCTCCAACCCCCATGGCATGCTGGGGAAGTACTCTCTGAAAAAATAAAGTCAATAAAATGTAAAGAATGG TCONS_00096463 . 5' 6671 TCONS_00096463 . 5' 6671 EMBV3_33194 TGCTCCTCCACAAAGGCAACCTTCCCAGGTCTGACATAGCCCCAGACCCCACAAGGATTT Gene GeneID:523737|DPM2:NM_001046268:121_cdna Constitutive 2 NULL GeneID:523737 11 GENE DPM2 MGC137183 dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit EMBV3_20998 AGACCCAGTCTGTTCTCTGAATGAGCTCGTCGAAGTGTGAAGACCCTCTGAAAGATACCT Gene GeneID:519580|HEPHL1:XM_002698988:15_cdna Constitutive 0 NULL GeneID:519580 29 GENE HEPHL1 NULL hephaestin-like 1 EMBV3_06945 TGCTCACCATAACTGGGGACGGCTTCGACTCCCAGCGCTATAAATTCTTGAAGGCACTGA Gene GeneID:781657|MGC152383:NM_001110185:69_cdna Constitutive 0 NULL GeneID:781657 15 GENE MGC152383 NULL Uncharacterized protein LOC100131378 homolog EMBV3_35458 AGCCAGTTACTGAAGAGGCACCTGAAACAGGTTTTGATGATGATGGTTCAGAATTTCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10279 CTCCGGTGAAAAAGAAACCGAATATTTCAGCTAAATTCTGTCCAGCAGTTGATAAATCAG Variant GeneID:515127|NUPL2:NM_001077923:20_cdna 503^579 2 EMBV3_37464 GeneID:515127 4 GENE NUPL2 MGC134117 nucleoporin like 2 EMBV3_43112 ATTAAAGGGTGTAGCTGTTTGGCCCATTTCTGCTGTTTGCGTGTAGCCAGGATGGGGGTT Gene GeneID:504370|CEND1:NM_001080222:230_cdna UTR3_Alt 1 NULL GeneID:504370 29 GENE CEND1 MGC142863 cell cycle exit and neuronal differentiation 1 EMBV3_09625 GCAGAGGCTTTGGCATCAGCAATAGCATCAACCAAGGTTATGAAGGCTCAGCAAGTTGTG Gene GeneID:514000|ARMC1:NM_001015594:22_cdna UTR3_Alt 2 NULL GeneID:514000 14 GENE ARMC1 NULL armadillo repeat containing 1 EMBV3_15132 CAGCACTTCATCCAAGAGACTGAGGCTGCCAAGGAAGCAGAGATGGACTGGGACGATTCT Gene GeneID:530999|CLSTN2:XM_002685044:118_cdna Constitutive 0 NULL GeneID:530999 1 GENE CLSTN2 NULL calsyntenin 2 EMBV3_11635 TGCTAAGTTGCCACAGTCATGTCCAACTCTTTATGACCCCCATGGACTGTAGCCCACCAG Gene BVV0101_090011 + 0 NULL GK000006.2:10246028-10923399 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41068 AACTGAGAACTTAATCTTCCAAAATGTCAAGCGTCCTCTGGTATCACGATTCCAAAACCC Variant GeneID:540910|SMARCE1:NM_001099116:204_cdna 98^246 3 EMBV3_27812 GeneID:540910 19 GENE SMARCE1 MGC152620 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 EMBV3_36057 AAAAATTGGAACAAATGCTTCTCCAACCCATGAGTGCAAAGAGGCTCCGGAAGGGAGGGC Gene GeneID:511251|NLGN3:NM_001075504:53_cdna Constitutive 0 NULL GeneID:511251 X GENE NLGN3 MGC143069 neuroligin 3 EMBV3_28131 CCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAATGCGTGTGGTCTCTACC Gene GeneID:537652|TRPS1:XM_002692745:65_cdna UTR3_Alt 2 NULL GeneID:537652 14 GENE TRPS1 NULL trichorhinophalangeal syndrome I EMBV3_31461 AGGGTGTGTGTTGTGCTGCTGGTGGTGTCCTGGGTTGGAGGTTTTCTGCACTCAATTGTT Gene GeneID:785997|LOC785997:XM_002693594:75_cdna Constitutive 0 NULL GeneID:785997 15 GENE LOC785997 NULL similar to Olfactory receptor 4A47 (Olfactory receptor OR11-113) EMBV3_35880 GACAGTCAAATTGAACCCTCAGAAAAATAGAAAACTGCTTCTCTGAAATCACTATTCTAG Gene GeneID:529336|TNFAIP8:NM_001083711:17_cdna Constitutive 0 NULL GeneID:529336 7 GENE TNFAIP8 MGC140345 tumor necrosis factor, alpha-induced protein 8 EMBV3_08336 TGTGCCAGCTTTGCTCCAAGTATTCCAGGTGTAGCCCACCATACTGTCCACTGACCTGAA Gene GeneID:613724|DYNC1I1:NM_001046516:60_cdna Constitutive 0 NULL GeneID:613724 4 GENE DYNC1I1 MGC137597 dynein, cytoplasmic 1, intermediate chain 1 EMBV3_27319 GTCAGCCATCGACATGATGGAAGTGTACAGCAGGTTGCCTCGTGCCGAAGTGATCAGAAT Gene GeneID:618021|LCMT1:NM_001076488:13_cdna Constitutive 1 NULL GeneID:618021 25 GENE LCMT1 NULL leucine carboxyl methyltransferase 1 EMBV3_20764 CCCTCTCAGTGTGTGACTTTCTTGGAGAGAAGATTGCATCTGTTTTGGGCATCAGCACCC Gene GeneID:100125286|FAM177A1:NM_001103329:2_cdna UTR3_Alt 2 NULL GeneID:100125286 21 GENE FAM177A1 MGC148766 Protein FAM177A1 EMBV3_09299 CGAACTTTTGTTCAGAATTGTGACTTGTGACCATGAAACATGAGAGGATTTGCTAGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05040 GGGCTAATGGACCTCTCTGTTCTCAGTCTCATATCCCTAAAAATTCTCTGTCCCAGACCC Gene GeneID:507699|HIF3A:NM_001105342:151_cdna Constitutive 1 NULL GeneID:507699 18 GENE HIF3A NULL hypoxia inducible factor 3, alpha subunit EMBV3_05323 TGGCTCCCAAATCTGCAATGTAGGCAGGGTATAACAGGAACATCTTCTCTCTGCTCCACC Gene BVT0102_008890 + 0 NULL GK000022.2:27534172-28238334 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126549 TCONS_00126540 1 XLOC_077461 Coding TCONS_00126540 XLOC_077461 NonCoding Coding - 22:28004880-28174146 - TSS94867 2091 3 TCONS_00126540_5 88 0.421329507412721 4 0.987670221250702 0.00322588636195709 0.00348319924483151 0.00372034227561996 0.00253212544894856 0.00304650511962396 0.00021273532602725 0.00254775776065828 0.00168505334526668 0.00214809300150464 3.01114670160568e-08 5.03640667336252e-09 1.00706660719301e-05 0.00029100322621477 0.000786836510726552 0.000340685721536649 0 0 0 0.00329169997409422 0.00447750137183095 0.00200011681123928 0 1.87972165171007e-05 0 0.00308019058416584 0.00304850497236472 0.00221277186940493 0 1.40204873697626e-14 0 NM_001105472.1 RERGL Bos taurus RERG/RAS-like (RERGL), mRNA. 4e-48 197 92.65 0.0645624103299857 0 noncoding ACCTAATAACACAGATCTCCAGGTGATGCCATTGCACCACCAAGGTGGAGAACCAGTGCCAGTCGCGGCTTTAGTTCGAGAAGCTTCACTACCTCCTCATGAGGAGGAAGCAAGTCAGTGTCACTGAACTGCGTTCTGTCGCCCTTCACCCCACAGGACTCGGTTCGAGGTCATATGTCTTTCTGGAGCAGGAACTAATGAATCCCAGAACCTTGCCTGATGCAGAGGAGGCTCAGATGTTGCTTGATGATGGCTCTGGAATCCAAGCTGTGAGGAAGCCCAGGCCTCATGAAAAGACCACATGAAGATGTTCTGACTGACAGCTCTCACCACAGCCAGCTGACCATTAAACTCAAGTCGGGAGTTTTCTGAAGACTCCAGGCTTTGAGTCACCCCAATCACTAGGTGGAGCAGAGAAAAGATGTTCCTGTTATACCCTGCCTACATTGCAGATTTGGGAGCCAAATGGATTTGCTGTTTTAAGCCACTTTATTTGGGGTGGTTCCTTGTAGATAAACAGATCATTGGAACATACACATTCTCAGAAAACAACAGGTTTTTAATGAAGTGTCGTTAGTGAATTATCTTCAGTGAAGTTCAGGCCATGATGAAAAACTGTCAGAGAAAGAACAAAGATCTTTCTCCTCAGTACCTAATTGAAACATTGGTGGTGAGAACTTGAGACAAATAGAGAAGGGAGATTATAATGCGCTTTTAGAAATGGCAACATCCCCACCATCCAGTTGCACAAATACCACCTTCCTCCAGCCCCGCTCTCAATGGTTAAGTAATGAGAGAGCTTTTTTTGTGCTGACTTCTCTCCATGTCAGAAGTTCTGATTCACTGGCAGCTCAACACTTTTATATGGGGGTTATAGTCTGGTGGGGAGAGGATGTGTCTGGGTACTGTATCTGCCTAGAGCCCTTGATGCTTTTAATAATGTAGTTGTTTAATCACTAGTCATGTCGAACACTTTGCAACGCCATGGACTGCAGCATGCCAGGCTTTCCTGTAATAATTAATAGTTAAAATGGCAAAGATTGATAAAAGTCTTTTATTCTTAATTCACATCAAATTAGAAAGTGGTCATTGTCCATATAAAATTATTTTTCCTTATCTGCTTTAGTTTCGGTGAGAGTTAGATTTCCCCAAAGGCAGCCCCTAAGAGAAAGACTTCTGTGCAGGCAGCTTATTTGGGAGTGTCAGATGGACAGACAAATAAAAGGAATAATTGAGACCCGATACACAGATGCGATTTTAAGTTGACAAGTGCTTGGGGAGACTGAAGGCTTAATGCCATGGGACTTTCAGAGGAGTTAGATGAAATGCTTCTCAGGTCCATCTACCCCAGAGAAGTGAAGGAGGAATGTTTACCGCTGGCTCCTATTTTCTGTGGATCAGTCGTTGTTCCACAGACTGTGTCTGAACGAGTGCCAAGTGGATTCCTAGGGGCATCCCGCACTGTATACCATCAGAGGAACCCCAGAGCAGGAAGCAGGAGACATGCAGGGCAGTGGAATCTTGCAGTAAAGCACCATCAGTTTCACCTGCACGAAGCTGGCTGAAGGATGAGTGGAACCAGTTATCTCAGATCAGCTAGAATAAGAGGTGACGATAAGAACAGATAAGAGGTGCTGAGGTGGTACCCAAGGTGTGTCTGATACGGTGTCCCCTTTGATCCACTCGGCTGTGCTTTTGCTCTCTTCATCCAAACAGTTACATAGTATGTTTCATGTGGCAGCCACCACAACCTGTGCAAAGACTTAATGCAAGGGCATTCGTGAACCAGGCCATGTGACTGCAGCCAGCCCTGAGACTCTTACTGATACTCAGCAGATCTCTCTAGCACCAGCTTTACCTCTGTGGTCTTCCTCTCAAAAACCTAAAACTCCAATAATCACAAAAAAGTACCAAGCAAATCCCAACTGAGGCACATTGTACCAAATACCTAACCAGTTCAGTTCAGTTCAGTTGCTCAGTAGTGTCTGACTTTTTGTGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACACCAGGAGTTCACTGAGACTCACGTCCATCAAGTCAGTGATGCCATCC TCONS_00126546 TCONS_00126548 TCONS_00126550 s 5' 0 TCONS_00126546 TCONS_00126548 TCONS_00126550 s 5' 0 EMBV3_31530 TCTACTTGATGCCATGAAGCATTCAGGTTGATTGTTCTGTGTCAGAATAATATCCGTAAT Variant GeneID:514014|XRCC6BP1:XM_002687554:566_cdna 418^499 2 EMBV3_33518 GeneID:514014 5 GENE XRCC6BP1 NULL XRCC6 binding protein 1 EMBV3_31431 AGAATCTGTGCAGACCATCACTCAGAGCGGAGTAGAGTGTTTAGCGGTCATATCAGAGGC Gene BVT0102_090887 + 0 NULL GK000014.2:60025511-60159867 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053596 TCONS_00053598 TCONS_00053600 TCONS_00053597 TCONS_00053595 TCONS_00053599 1 XLOC_031777 Coding TCONS_00053600 XLOC_031777 Coding Coding OXR1 14:59999550-60075536 j TSS39500 4344 1 TCONS_00053600_4 632 13 0.943001908271369 0.000284400730166236 2.12930540286133e-18 0.000137141817257502 2.78658534628132e-11 8.25196299182911e-29 3.9174148371728e-07 6.89777652706862e-05 9.63642227160685e-05 0.00023522546137329 0.000204923274158882 0.000486566614305413 4.72752049739019e-14 1.73237382908207e-08 4.62711333141084e-12 1.06037067424052e-15 0.00465105426244454 0.000138840005577415 9.56091273899812e-08 3.52312439643194e-17 0.000312329606911557 3.75325987744031e-05 0.000957656994886316 0.000142836064284892 0.00205633612145198 0.000222181548986032 1.91075270410367e-07 1.80641865003135e-16 2.91576713001948e-05 4.60939368366942e-05 7.37938882230302e-05 NM_001076148.2 OXR1 Bos taurus oxidation resistance 1 (OXR1), mRNA. 0.0 2736 99.67 0.352209944751381 NM_001198532.1 OXR1 Homo sapiens oxidation resistance 1 (OXR1), transcript variant 3, 0.0 5211 88.48 0.940147329650092 TCONS_00053600_4 sp|A5PKL1|OXR1_BOVIN OXR1_BOVIN Oxidation resistance protein 1; 0.0 1326 100.00 0.998417721518987 1 coding 1 0 1 1 0.101421257442531 0.50936525962807 0.030492410709306 0.612844397812918 TGGTTTGTATTTTGAAATTGCTTGAAGTAGAGAACTTCATATAATTGTAATGTATGATGGTAAAGCATATACTCTGATAATAGATTGAGACTAATTGTTAACAAACGCAAAATTTCTCAAGCTATTCTATCTCTAAAGATGGAAATACAGCACTTACCAATCAAATGTAAGATTGTTCCATAGACATATTAATGATCATTAAACCTTATGGTTTAGATTTTCTCTTTTGACACATTAATTTCTTTTTCTTTTAAACAGGTTGAATCAAGGGATTCTTTGAATAGTATAGCCCTGAAATTTGATACAACGCCCAACGAACTTGTTCAATTAAATAAATTATTCTCCCGAGCAGTTGTTACTGGACAGGTTTTATATGTTCCTGATCCTGAATATGTCTCCAGTGTTGAGAGCTCTCCATCTCTAAGCCCCATAAGTCCTCTGTCACCAACATCATCCGAGGCAGAATTGGAGAAGACCACTACTCCTGATGTAGTCCACCCAAAAGAACCAACTCCCTCATCTGCTTTTACTGCTGTTCGACCTGTACGAGTTGTATCTTCAACTTCTGAGGAGGAAGAAGCATTTACTGAGAAATTTCTTAAAATTAATTGCAGATATATTACCAGTAGCAAGGGCACAGTCAGTGGTGTATTGCTAGTTACACCAAATAATATAATGTTTGATCCACATAAAACTGACCCATTGGTTCAAGAGAATGGCTGTGAGGAATATGGCATCATGTGTCCAATGGAAGAGGTGATGTCAGCGGCAATGTACAAAGAAATTTTGGATAGCAAAATAAAGGAATCCTTACCCATAGAGATAGATCAGTTATCAGGAAGGGACTTCTGCCATTTAAAGAAAGTGACAAGAAGTAATACTGATGAACTAGACTCAAGAATCCGTGATGCAGCTAATGACAGTGCCAGCACTGCTCCTAGGAGCACTGAGGAGTCTCTTTCTGAAGATGTGTTCACAGAATCAGAACTCTCTCCTGTTCGGGAGGAACTTATTTCTTTGGATGAGCTACGACACGATAAATCATCTGGTGCGTCATCAGAATCTGTGCAGACCATCACTCAGAGCGGAGTAGAGTGTTTAGCGGTCATATCAGAGGCTGCTAGTACTCCTGATCACTTAAAATCTGGTTCTGGACATACTGCCAATGAAGTTGGGACTCTTTCTCTTAAAACTGGTTTAAATAATCTTGAAATGCCCACTAAGGAAGGAGATCAGGCTGCAGATAATCTTCAAAAAATATCAGGTCTTAAAGAACAAAGCACAGGTATAAAAAAAGATAACCAGGATTTTCCTCTTGATGAGAATTCACTACATCAAGAAGAAGTTGAAAAAGAAAGTATGCCTTGTGGGGAAGCAATAGAATTAAAACAAAAGCAAGTTGTCGACAAAGGAAAACAAGGAAGAGAACAAAATCAGGACTCAGAGACTGAGGTAGAAGAGCTACGGAAACTCTGGAAATCCCATTCCATGCAACAAACTAAACAGCAAAGGGAGACTATGCAACAGGTGTCACAGAAAGAAATTAAGCATAAAATAGCAACAGCCGATATAGAAGGTTCTGCACTTTTAAAAGAAAAGAGAAGGCATCGATTGCATAAGTTCTTATGTCTCAGAGTCAGAAAACCTATGAGGAAAACATTTGTATCTCAAGCAAGTGCAACAATGCAGCAGTATGCACAGAGAGATAAGAAACATGAATATTGGTTTGCTGTGCCACAAGAAAGGACAGACCACTTGTATGCCTTCTTCATTCAGTGGAGTCCAGAAACATATGCAGAAGATACTGGTGAATATACCAAAGAACCTGGATTTATAGTAGTAAAAAAGATTGAAGAATCTGAAACAAATGAGGATTCTACTAATGAAGCAGCAGCTAGAGAATGGGAGGTAGTGTCAGTGGCTGAGTATCACCGCAGGATCGATGCTCTAAATACTGAAGAACTGCGCACACTCTGCAGACGTCTCCAGATTACTACGAGGGAAGACATCAATTCAAAGCAGAGTACTCCAGTGAAAGCAGACCTGGAATCTGAATCTTTTCGACCAAACCTAAGTGATCCCAGTCATCTCTTACTGCCAGATCAAATTATAAAGCTTACCAAGCATCTTCCACCAAGAACAATCGGCTATCCATGGACTCTTGTTTATGGTACTAGGAAGCATGGCACAAGCTTGAAGACCCTTTATCGAACAATGACAGGTTTAGACACTCCAGTGCTGATGGTGATTAAAGACAGTGATTGGCAGGTTTTTGGTGCATTTGCATCTCAGCCATTTAAAGTGAGTGATGGCTTTTATGGAAATGGAGAGACCTTTGTTTTTACATTCTGTCCAGAATTTGAGGTCTTTAAGTGGACAGGAGATAATATGTTTTTTATCAAAGGAGACATGGATTCACTAGCTTTTGGTGGTGGAGGGGGAGAATTTGCCCTATGGCTTGATGGAGATCTCTACCATGGAAGAAGCCATTCTTGTAAAACATTTGGGAATCATACACTTTCTAAGAAGGAAGATTTCTGTATCCAAGACATTGAAATCTGGGCTTTTAAATGAATATAATGCTCTCTGTCTTAGCAGGATAATGGCCCAAACCTGACATAGACAAACAAGCATTGTTTGGAAAGTTCAAGAAGCAATACAATGTAATATGTAGCTCGTGTTTTAAAATTAGTTCGTATCACCATTTATTATAGCTATAATTTTGGAATTTATTTTTAAAATCATGTTTCTGTCCCAGACGTTTTTAGGTTTATACCATGGCATGGGTCCATGGAACATAACAGCTTAGGTTTTGTCAAAATTTTGGTAGCATTTTGATCATAGTGACCACCTCATCTCTAATCCATGTTTTCTCAGTCTCCTAATAGGATGGTGCTCTTTTGTTGAACCTATTTTGGTTTTTTATTTTTTAAACTATATTGATTGTTTTACTAAAGTAGTCTAACTTGAGATATCTAGGGAATGAATACATGATACTGCCGTTATCTGTGAGGTTGGCACAAATGACTATTGGACATGCTCAACCTAGTTACTCTTAGAAAAAAACACATGCCAGAACAACACGTACTTCATAGATCACTGAGTTCTAGTTTTAATTCACACTACTGCATTCTCTTTATTAATTTTGCCAGTAATCTCAATTTCATTTTAATAAAAATGAAATTTGAGGAGAATTCTGATTGTAATAGACCACAATGCACATGGTCTTCAGGTTTGGGCATATGCTTTCATCATTGAATTGTCTGATGAAGAGTTATAAAATGACAAAGGAGAATGAGAACTTGATGATTCTACTGGATTTAATATATCAAGCAAGAAAATATCTATTTACGTATTTGTAGCTTAGCAGGGCATTATCATAACTAAAAAACTATGAAACAGATGCATATTTCGTCAACATATTGTGTCAGGTAAACTGTTTTATAGTTCTGTTGTTTTAGCCTTGTTGCACACCAACTCCCAAAATATAGGTTCCTATTCAAAAGGAAAAAAAAAAAACTTGTGATTTTTTTAAGTGGTTTATGTTATTACCATTAGCATTTGCTGTTACAAAAGGGCAATGATTATAGTAGATTATTGTAACTCAGTAGACTTGTTGAATATGCAGACTTACTGTCAAGTGACCTCAAAAAAAAAGAAAAGATAGAATATATCAGTAGTTCTTATCCTCTTTTGTAGGAAACCAATAATAAGCCATTATGGCAATAATTCATCAGTTAATTTCAAAGCTTCATGTTATGCAAAAACAAAGAATCCTGCTGTTATACATGTGACAGTGACCTTGTGCTGAAATTTCAGCTATTCCAGATAAACATTGTATATTATCTTGTAAATTAATGTTTAAAGGTAGTTTTGTTCTTATAGAAAGTGTTGATTGCCAGGTTGCTTATAGCACTTTAAATTATTCTGAAAATGAAATTATAAGCCAAATATGTTGGCTTAAGTAGTTTTAGTTGTATAGTACTTGAATATATTTAGATCTTTTGAAAATTTAGATAATATCTAAAGAAAGCATAATGCTAATGAAAAAGAAAATCTGATATTCTATTTAATATGCTATTGCTGAATATGAATAGAAATGCAGGGCATCGTTTCTTTGTCTATGTAAAGCTCTCATTAAAAATTACTAACAGTGTATAGATTAAATGTTTACAATATAGGGAACTGTAAATAAATATATCAGTTTTCCCCCCTTTGGTCTTCCACAGCAGTATTATTGTCTTTGTGGAGTTGACTAATCATAAAAAAATCCTGTATTGGATTTCAGTTACAATAAGGTCATAGTGGTGTATACCAAATAAAATTAAATACATAAATATAAAT EMBV3_08242 CCCACACCATGTGCATTGAAGGCACACAGGGCCGGACGCACCAGCTACGTGTGCACTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36009 TCATGGATCGGTGGCTCCATTCTAGCTTCTTTGGGCACCTTTCAGCAGATGTGGATTTCC Gene GeneID:100125416|ACTL6A:NM_001105035:2_cdna Constitutive 0 NULL GeneID:100125416 1 GENE ACTL6A MGC151809 actin-like 6A EMBV3_06389 CTCACAATGACAGGACCCACACCATGACAGGAGAAAACAGGATGAGAGAGGATACATTGC Gene BVV0102_027523 + 0 NULL GK000029.2:40936455-40940484 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165159 TCONS_00165157 TCONS_00165158 1 XLOC_100443 Coding TCONS_00165158 XLOC_100443 Coding Coding FADS1 29:40938864-40952991 = TSS123431 3702 1 TCONS_00165158_3 440 12 0.738779555429704 0.000618016338172854 0.00102922277988446 0.000775954646505408 0.00067922928206955 0.000862923608779699 0.000494880233177521 0.000282219563695532 0.000326230650567499 0.000856715744862624 0.000615895635526038 0.000130388813474145 0.000161969108984582 1.02336870959309e-05 0.000287625929132318 4.56577548764237e-05 0.0741802773543556 0.0159322898418684 0.0303396501338152 2.90879138717261e-06 0.0006241871938035 0.000169714184595657 0.0107016743974536 0.00689872229766448 0.0224081978073572 0.000368226108598547 0.000394700525934291 0.000549142584757462 0.00123747269665963 0.00143231347951356 0.00249839712771332 XM_002699285.3 FADS1 PREDICTED: Bos taurus fatty acid desaturase 1 (FADS1), transcript 0.0 6666 100.00 0.998109130199892 NM_013402.4 FADS1 Homo sapiens fatty acid desaturase 1 (FADS1), mRNA. 0.0 2057 87.21 0.45569962182604 TCONS_00165158_3 sp|O60427|FADS1_HUMAN FADS1_HUMAN Fatty acid desaturase 1; 0.0 835 93.64 0.997727272727273 2 coding 0 0 1 0 0.0053615528038381 0.970332088491537 -0.00947535171560324 0.850228027068221 GACGCGCACCAGCGGACCCGCTACCGGAGCCTACGAGGCCGGCGCGCGCTACCCCGAGGGTCCTGTGCCCGCGCCTGACCGCAGCCACCCAGCTGGCGCGCGTTGTTGCCCAGCCCCAATGGCCCCCGAGACCCCGGCCCAGGGGCCGACCCCACGCTATTTCACCTGGGACGAAGTGGCTCAGCGCTCTGGACGTGAAAAAGAGCGGTGGCTCGTGATTGACCGAAAGGTGTACAACATCAGTGAATTCGTCCGCCGACATCCCGGGGGCTCCCGGGTCATCAGCCACTACGCGGGGCAGGATGCCACGGATCCCTTTGTGGCGTTCCACATCAACAAGGGCCTTGTGAGGAAGTATATGAACTCCCTCCTGATTGGAGAGCTGTCTCCGGAGCAGCCCAGCTTTGAGCCCACTAAGAATAAAGAGCTGATTCACGAGTTCCGGGAGCTGCGGGCCACGGTGGAGCGGATGGGGCTCATGAAGGCCAACCCTGTCTTCTTCCTGCTGTACCTGCTGCACATCCTGCTGCTGGACGTCGCTGCCTGGCTCACTCTCTGGCTCTTTGGGACATCCTTGGTGCCCTTCCTCCTGTGTTCCGTGCTGCTCAGTATAGTTCAGGCCCAGGCTGGCTGGCTGCAGCATGACTTTGGACACCTGTCCGTCTTCGGCACCTCTAAGTGGAACCACCTGTTACATCATTTTGTGATCGGTCACCTGAAGGGGGCCCCTGCCAGCTGGTGGAACCACTTGCACTTCCAGCACCATGCCAAGCCCAACTGCTTCCGCAAAGACCCCGACATCAACATGCACCCCTTCTTCTTTGCCCTGGGGAAGGTCCTCTCTGTGGAGCTCGGGAAACAGAAGAAAAAGTACATGCCCTACAACCACCAGCACAAATACTTTTTCCTGATTGGGCCCCCAGCCTTGCTGCCTGTCTACTTCCAGTGGTATATTTTCTACTTTGTTATCCACAGGAAGAAGTGGGTGGACTTGGCCTGGATGATCACTTTCTACGTCCGTATCTTCCTCACTTATGTGCCGCTGTTGGGACTGAAAGGCTTCCTGGGGCTTGTCTTCATGGTCAGGTTCCTGGAAAGCAATTGGTTTGTGTGGGTTACACAGATGAACCACATCCCCATGCACATTGACCATGACCGCAACATGGACTGGGTCTCCACCCAGCTCCAGGCAACATGCAACGTCCACAAGTCAGCCTTCAATGACTGGTTCAGTGGCCACCTCAACTTCCAGATTGAGCACCATCTTTTCCCCACGATGCCTCGACACAATTACCACAAAGTGGCTCCCCTGGTGCAGTCCCTGTGTGCCAAGCATGGCATAAAGTACCAGTCCAAGCCCCTGTTCTCAGCCTTCGCTGACATTGTCCACTCACTGAAGGAGTCCGGGCAGCTCTGGCTAGATGCCTATCTCCACCAATAACAGCCACCTCCCTCTGCAAGAAGGGTTATGGCACCAAAGCAGACAGAAGCTTGGGGGCAATGCCACTACAATCCTAATATTCAAAGGGGGTGGGTTTGAGGAGACAACAGGTTTGCACTCAAACCCCTCCCCTTTATTTTCCAGGCACAGATCTAAGACCCAAAGGGGTGGGGGGAAAACACAAGCCCCTTGAAAGGAGGGGTGGAGCCTCTGGGACAGGGCTGTGAGTTTTCTTTCTTTTTTTTGTTTGGCAGATGCAGGTGGCTGGTGAGCTAAGAGGGAGGCAGGAGGGTGTGGGAATAGGGAAGGTCTACTGAGCCCAGAAATCAGGAAGAGATTTAGCACTGAAATTTCATCCAGGAAGGGGAGGCGCTCAGCCCACTGGTCCACTTCTTGGTGCCTTCTCTACCCTGGCTTGCAAACCTCAAGAGGTTCACAGGCTGGAGGAAGACAGAGCAGCTGAACCGCCTGGGCAAGATTTAGAATTCTGAGGCCTGGCATAGTGTGTGGCCTGGGAGCTCAGCTCACTCTAGGGCTAGGTGTGACCCATGCCTGCTTCAGACTCCTCAAGAAGCAGTTTTTCCACTTTGAGAAGCAGGGTGGCAGAGGGGAGCAGAGGCCAGGGCTGTGCTGTTGGAGGTGTCCAGCCCTGAAGGATGCTAACACTACTGGATTTGGTATCGTGTTCCATCTAGGGTACCAAGGGAGCCTGAGGCTGCCAGTGGAGTCGCTGGCCATTAAAAATCCTTTCAGCTTTTGACTGCCCTCTTAACTATCACCCAAGGGACAGAACACTCCTAGGATGTGGAGTCTACTTCTTGCTCCATAAGCAAGTTGGGCATGTGGGGCACTCAGTCTTCTCCATAGAAACAAACTGGGGCTCCCAGTGGTTTCCCTGTACTCCCCTATTTGTAATTCCAAATTTAGTAAAAATAGCAGTCAGGTGAGCGCAAGTGACCAGGCCGGGGGAGAGACTGGAATCACTAGTCGTGATGAAAACACAAGAGTTCAGTCACAAAGAACATAATGGCTCTAAGAGATTTTCTATAACAAATTATGTTACAGCATCACTTTTGAGCAGGGGCATTGCTCAAAATGACTTCATAGTTCTTATCAGAAATAGGAAGATAAAAAACAGAAGTCTGACCATCATGGCTGTCCTTTAGAATCCTTACTCTGGCAACTATGTTCAAGTGTCTCTCTGCTGGAGACCAGGTAGGAATTTAGGAGAATCTCTTAAAAGTATATCAGTCTAACACATTTCAGTGTACAATTTTTTAATCCCATTTTTTTTTCCCCCAAAAAAAGATTGAAAACAGTTTAACCCATCTCTAGAGAGGGAATGCCGGGACTGTGCCCCACGGGTTATCAGCATTCACATCCCCACCCCCACAGCCTTTCAGTTCAGGTGAGATCAATTCACCTGTTCAACAGCATCTTCTCTAAGCATATTGAGTATTCTGGACACTGGAAAGAGAACCTTAATCTAGAAGAAAAAAGCAGAGACCTGGGAGCATTCGCATTTAGTTTAGGAAGAGAATGGCAAAGAGATGAGAGTGATAACCAGGGCGATGAAGGGCTTAGGGGATGTTGGGGTGGGGTTAGAGGCACCACCTAACAGGGTTTGCAGTTACTTAAAATAGACTTTTACATACACACACACACACACACAGAGGAAACCAGGTTACAGATTTTAGATCTTTTCCATTGGGGCAGAACAACTGAGAAGCAGATTGGAGAGTCTGCTTTCACTGGCTCTTCACTCTAGAATAGGTGCTAAACCCAGCCTATCAGGCCACCTGGCTTTGGGCCCAGGCTGCCCAATCTGAGCAAAGCTAGTGGGTCTTTCTGAGCCAAGTCCAGGTCCTCAAAGCACCTCAACCACTGTGGCCTTCTCCCCTTAGTCTGGCCCAGTGTGGTCTCACATGGCCACAAAGGGACAGACAAGTAACAAAAAGCTCAGAGCTGCAAGATAACATGAGAGATCTCACAATGACAGGACCCACACCATGACAGGAGAAAACAGGATGAGAGAGGATACATTGCCTCTCTGGTCATAGATGTGGCAGCACTAACATTTGAACTCACTTTTTAAAAACTCCAACTTCTAGGCTGTCTTGTTACTTTCCTCTTCCTACCACTCTGCCACAGGCCTTTTAAGTAGACCCTGTTGTCAGTATCCTTTTTGTGTGTACCAGTGTTGTTACCATGTGCCGATGAAATCAAACTGAGAAATAAAAGTTAATTTGACCAAACAAAGG EMBV3_10428 GTACGTTGGAAGGTGTTCTGCATTGAGGTGAAAAAAGGGCAGGGTAAGGAGATCAGGCTG Gene BVV0102_058878 + 1 EMBV3_19004 GK000018.2:46996556-47018463 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32356 GGAGCTTCCTCACCAGTTTTGAGTTGCGAAGCAAATGTATACAAACAGAAAAAGAGCTTC Gene GeneID:613328|ZNF385B:NM_001083502:41_cdna Constitutive 2 NULL GeneID:613328 2 GENE ZNF385B MGC139239 zinc finger protein 385B EMBV3_43188 TTGACCGGAGATGGAGTGGGAGCCGTGAACATCTCTGTGGTCAGTTCCACGGGTGGCTCT Gene GeneID:535697|KRT7:NM_001046411:45_cdna Constitutive 0 NULL GeneID:535697 5 GENE KRT7 MGC137771 keratin 7 EMBV3_37631 AAAAGCCTGAAGTCCCAAGGTGGCATCTGCATTCTCTCTTTCCCTGGAACTCCCACTGTC Gene BVV0102_107810 - 1 EMBV3_07576 GK000007.2:5027042-5051321 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23592 AATGTTCCACAATGGTCTTAGCTTGGGAGGCATTCCAGAAGGCTACTCTGATTCACCCCG Gene BVV0102_390544 + 0 NULL GK000019.2:19921063-19937602 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21349 AGCAGCAAAAGTGCAAGGCCTAACCACTCGACTGCCAGGGAGTTCCAATGTGTGTTGTTT Gene BVV0102_050360 + 0 NULL GK000030.2:134105128-134309341 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36911 ATATTTCAATCCCCTACCCTTATCTTTGCCGTCTATGGGGGTCGCACAGAATCAGACACG Gene BVT0101_029078 + 0 NULL GK000021.2:30496277-30596445 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08814 TTGAACCAAGAACACACCATCCATATCTCCTGGAAATGCTGTTAGCTCCGGACATTCGAC Gene GeneID:509599|NUFIP1:XM_002691778:376_cdna Constitutive 0 NULL GeneID:509599 12 GENE NUFIP1 NULL nuclear fragile X mental retardation protein interacting protein 1 EMBV3_35728 GGAAAGGGGAAGTCTCATGCAGGTTATAGGTCTTTCTCTGTCTAGGTTTCAGGTGCTCGC Gene BVT0102_134060 + 1 EMBV3_34175 GK000022.2:56217922-56220080 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127536 TCONS_00129210 TCONS_00129214 TCONS_00129215 TCONS_00129213 TCONS_00129212 TCONS_00129209 TCONS_00129216 TCONS_00129211 2 XLOC_077669 XLOC_078067 Coding TCONS_00127536 XLOC_077669 NonCoding Coding ATG7 22:56039459-56220179 j TSS95363 2598 3 TCONS_00127536_5 127 0.0904541955350269 5 0.985651757701183 0.00445866204183548 0.0013905200251731 0.002850700695802 0.000526811416588081 0.00097109274202583 0.000760488523630153 0.00177441504909827 0.000974748375319702 0.000759410790953343 7.77472735486197e-06 1.18838920860526e-10 3.33432024408377e-74 6.5252556287516e-06 5.2765845608117e-92 0.000469333706799652 0.00101965333494222 0.000105746194925502 0.00123401318984324 0.00359219993157835 0.00260275418113532 0.00139085734975207 0.00086635926133679 0.000673820821275999 0.000558493338771399 0.00361397750816965 0.00287831995700629 0.00279002401762177 2.65370960331466e-38 0.000128801628158875 0.000205260009748561 XM_005223080.1 VGLL4 PREDICTED: Bos taurus vestigial like 4 (Drosophila) (VGLL4), 0.0 3238 100.00 0.690531177829099 NM_001284390.1 VGLL4 Homo sapiens vestigial like 4 (Drosophila) (VGLL4), transcript 0.0 845 81.28 0.342956120092379 0 noncoding 1 1 1 1 -0.246463405197153 0.317126650206674 -0.0219399853616304 0.648799774930568 TGTGCTCTGCGGCTTTTTGCTTTGTACGTCATCTCTGCGCGCACCTTTACTCCTCCTGAGGACGGGAGCATAAGGCTCTGTTCAGTTCAGTCGCTCAGTCGTGTCTGACTGTTTGCGACCCCACGGACTGCAGCACGCTAGGCCTCCCTGTCCATCACCAACTCCTGGAGCTTGCTCAAACTCACGTCCATTGAGTCGGTGAGGCCATCCAACCATCTCATCCTCTTTCGTCCCCCTCTCCTCCCACCTTTAGTCATTCTCAGCATCAGGGTCTTTTCAAATGAGTCAGTTCTTCGCATTAGGACCTGTTAGCCAAACCCAAATATGACCTAGTGCCTCGTCTCACTGGTGTTTGACAAGAGGATTTCAACTCAAGCTGCTTCTGCCCTTCATGGGGCCAGGGGTGACGGCACGGAGCCAGGAAGCTGCAGATACGGGGATTTCTGTCACGGTTTGATAACGTCCTTCCTGTCAGCCTGGCCTTTGACAAATGCACGGCTTGTTCTTCCAAAGTTCTCGATCAGTATGAACGAGAAGGATTTAATTTCCTGGCGAAGGTGTTTAATTCTTCGCACTCCTTCTTAGAGGACTTGACCGGTCTTACATTGCTGCATCAAGAGACCCAGGCTGCTGAGATCTGGGACATGAGTGACGACGAGACCATCTGACACGCGCGCCTTGCGCTCCGAGGCCGCCGCCCCAGGACTGCGACTTGGCCCCGCGTCCCCACCGCTAGAGGCCCGGCCTGCCTCCGCGCCAGGAGCCCCTGGTGTCCTCCATTTCTGACAGCTCCTCATCCCACCGGAAAAACAGGCCACAGAGAATGGTATATTACAGATTTACAAACACGGAGAGAATGGTCTGAACGCACTGCGGATGGCCTGGCTCTGTGGAGAACCTCTCTGTGCCCTGAGGCCGGGGAGTGTCCCCCTGCCCGGGGCCCCTCCCAGGCGGCCGCTCCCAGCAGGGACCCGGCCCTCAGCGCTCCAGTTCCCCCTCCCCAGCGATGTCCTCGCTGGCGGGCGCCCGCCGAGCCCCGTTCTGCACAGAGCCGCCGGCAGTGGGTCGTTTTCCTGGGCGACGCTCAGTAGCCTGTAGCAATAACAAACTAGTGGCTATTAAGGCAGATGCAGTGTTCTCATAGAATAACTGTGTTCCTGCACTTTTACAGACAAATCTAAGACGAAAAAAAAAAAAAGATCAACTTTTTTTTCCAAACAAAAAAAAAAAATGAATGATTACAATAGGAAAAGGGAAAAATTAAATAGCTACATATCATTAACAAATTAATTGTTCTTCAAAAAATACCTACAAATTTCTCTGTACATTCTTTACGCACAGCGTAATGATGGTCTTAAAGTTACCTATATAAAAAAAGTGTTCTCGATGATTTTTTTTTCCTACAGAAAATATAGGGGCCTGGATGCAAAAGCCTGGAAGCCCAGTGAAGTGGGAGGGAAATGCGTGCGGGGTTGTGGGGGTGGGGGGGGGGGGGAGACGCCTTCCTCCTGCCTCTTCAAAGACCTGCAGCCCCAGGAACCCAACGCCCGCCTGGTCACCCAGTGCCAACTGTGTAAAAGTCACCAGCCAACCTGTATCTCTCTCCTACTGACGACCAGGCCAGGGGGCACCCAGAGCCCTGGTGGGCGGGGCGGGAGGCGGCGCCCGGAAGGGGCGGGGCCCAAGAAAAGGTTCCCGGACACAAAAGCAGCTGTCGAACATCCACAGCTGGGTCTGTCATGCTTGCTTCTTCGCCTAATTCCTAGTTAGTAGCTATGACTATAGCAAACAATAATAAATGCAGTAATAACTGTATAAAGTCAGAGGAATGTATACTGCCTTGGCCCCAGCGTACGAGAGGAAGCACACAAAAACACCGCGTCAGATTGTCGGGCATCTGCTGTCCGGCCAAGGGAGCAGAGCAGTTTCTGTATCGAGAGGGAAGCTGGGAGACACCAGTCCCAACTCCCCTGGGAGCGCGGGAGCAGGCAGGGAGGCAGAAAATAGCCGATGCTGTCAGCCTGCGGCCACCGCTCCAGCATACTACTCGGCCGCTGACCAGCCACTCGCCCGCCCGCGTCCAGGGCCTGCCAGGGAGTAACGTGGATATCAAATACAAATCTTAGAGTACAACTGTACCAGCAGTAAGTATATCTAGGACTGTAACTGACAAAAATAAAACGCATTCTGAAAAGAAGCTAGTTAAGTATTAAGGATTTTTTGTTTACTGTCTATACAGTTAATAGAAACCAGCTATTTTTATCCATTAAAACATGCATCACTGTTGAAAGCACTACAGGCTCCTCCAACTTCAGCTCTAGCCTAACAAACTGCAGTGTTCAGAAAAGGTAAAATGCCCGTGATTGGTAAGAGTCTGCAGTCCAGTTGCAAGCACCTGAAACCTAGACAGAGAAAGACCTATAACCTGCATGAGACTTCCCCTTTCCAAAGCGGTTTTGTCTAAATTAAAAAACAACAAAAAACACAAATGGTCACAAATGTCATCCTGAAACCCTCTGTTTCTCAGCAGTTTGCCCTCAGAGCACCAGCGTCTCGCACAAAGCTGTCAGGCAGGCCACTCGAGTCCTCCTCCCATAG EMBV3_09364 AAATGAACAAGACTCTGAAGCTCCCACAGACAGAGGCTTGGCTCCTTAGGATCTCTGAGC Gene BVT0102_400065 + 0 NULL GK000002.2:71895749-71961137 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24306 CATCCTCATTGGCTCTGTGGCTGTTGGATCTGGCCTTTCCTGGCATAGAACTCTTCCACT Gene GeneID:100139879|NUP37:XM_002687637:793_cdna Constitutive 3 NULL GeneID:100139879 5 GENE NUP37 NULL nucleoporin 37kDa EMBV3_41364 TGGGCCGAGGAGAAGTAGTCACTGTTCGAGTACCCACCCATGAAGAAGGATCATATCTCT Gene GeneID:783375|ACBD3:XM_002694001:302_cdna UTR3_Alt 2 NULL GeneID:783375 16 GENE ACBD3 NULL acyl-Coenzyme A binding domain containing 3 EMBV3_26987 CAGAGGTCTCCTTGTCATTTTTTGGGGGGAGCACTCACTGCAGAGCAATTGGATCAACAG Gene GeneID:504353|ATP2B3:XM_002699735:173_cdna Constitutive 0 NULL GeneID:504353 X GENE ATP2B3 NULL ATPase, Ca++ transporting, plasma membrane 3 EMBV3_37697 CGGAGGCCGGTGCTGTTGGCCGGTTTGCATCGCCAGCTTCTATATATTACTTCCTTTGTT Gene GeneID:338046|NDUFC2:NM_176642:7_cdna Constitutive 0 NULL GeneID:338046 29 GENE NDUFC2 NULL NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa EMBV3_10813 TTAGACACTTTCAAGCACCCGAGCGCCGAGGGAGACCTCACCGCATACATTTCAGTTAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30607 TGAGCCTGCGGGTTAGGGTCATCTATGCAACTGGGAGAGAGTTGAATGGGGTGCAAGAAT Gene GeneID:509748|LPAR2:XM_002688516:78_cdna Constitutive 1 NULL GeneID:509748 7 GENE LPAR2 EDG4 lysophosphatidic acid receptor 2 EMBV3_00109 TCCTCTTTAAGGCACGTGACAACTTTCTCATGTTTAGGAACACTGAACACAACTAAGCAC Gene BVV0102_260510 + 0 NULL GK000003.2:20047227-20059125 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31785 TCACTGTGTGGGACAAGGCCGGGGATTCAGTTTTTATGATGAATTGTTAGCTGGTGGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20258 CTGAACTTCAGCCAAGCTCCAACAGACAAAAGACTTGAGGTCAAAGGCTGTTAGTCCCTC Gene BVV0101_089249 - 1 EMBV3_33273 GK000024.2:35564668-35565043 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138870 TCONS_00140118 TCONS_00138867 TCONS_00138868 TCONS_00138869 TCONS_00140116 TCONS_00140119 TCONS_00140120 TCONS_00140117 TCONS_00138872 TCONS_00140121 TCONS_00140123 TCONS_00140122 2 XLOC_084755 XLOC_085065 Coding TCONS_00138867 XLOC_084755 Coding Coding USP14 24:35524134-35565134 j TSS103982 2810 1 TCONS_00138867_2 420 0.0594306049822064 17 0.931876387228957 6.35733492835487e-11 1.40618036116144e-37 9.70703169709894e-12 8.82943441256065e-05 1.75126092520226e-13 2.56549044086554e-54 9.8362726485674e-08 9.08085559738861e-78 3.25708264747398e-35 1.52695510215171e-05 1.09909492679206e-12 8.58337761205177e-05 3.72038612813965e-17 8.27267388055728e-06 5.82308712670591e-78 0.00487726743516307 0.00570707203233071 0.00752477785633097 0.000103180463055091 2.24898524321278e-08 1.02924613009425e-89 0.0026330172066795 0.00228111747359608 0.00318146815125047 3.21069977256575e-17 1.8616377153307e-18 4.38904595379162e-23 6.46944103303315e-06 3.45111967657054e-13 3.83409852655732e-08 XM_005224119.1 USP14 PREDICTED: Bos taurus ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) (USP14), transcript variant X1, mRNA. 0.0 4607 99.84 0.912455516014235 NM_005151.3 USP14 Homo sapiens ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) (USP14), transcript variant 1, mRNA. 0.0 3124 87.93 0.881138790035587 TCONS_00138867_2 sp|Q0IIF7|UBP14_BOVIN UBP14_BOVIN Ubiquitin carboxyl-terminal hydrolase 14; 0.0 862 99.76 0.992857142857143 2 coding 0 0 0 0 0.0259602671413665 0.812212661292192 0.00410274448342136 0.930780935956624 GAGCAACCATCTCCCCCCGACTCCGTCCCCCGCTTATATTCTTCCTGTGGGCTGAGACCCAGAGATTTTAAATGAACATATCCTGGTTAGGAGGCCAGTGTAACCACAAGCGGCTTTATAAAGAGGGAGGCAGAGGCTCTGAGTGAGAAGAGTTGCTGGGCGGATGCAAGCCGAGGTCAAATGGTGCCTTGGCTGGAGTGGGGCCAGAAGACGAGGAATGTGGGGAGCCTCTAGAATCTGGGGAAGTTACTGTGAAATGGGGAAAGGAGAAATTTGAAGGTGTAGAATTGAATACTGATGAACCTCCGATGGTGTTCAAGGCTCAGCTTTTTGCACTGACTGGAGTCCAGCCGGCCAGACAGAAAGTTATGGTGAAAGGAGGAACACTGAAGGATGATGATTGGGGGAACATCAAAATGAAAAATGGAATGACTGTACTAATGATGGGGTCAGCAGACGCTCTTCCTGAGGAACCCTCAGCTAAAACTGTCTTTGTAGAAGACATGACAGAAGAACAGTTAGCATCTGCTATGGAGTTACCATGTGGATTGACAAACCTGGGTAATACTTGTTACATGAATGCCACAGTTCAGTGTATTCGTTCTGTGCCTGAACTCAAAGATGCCCTTAAAAGGTATGCAGGCGCCTTGAGAGCTTCAGGAGAGATGGCGTCCGCACAGTACATTACTGCAGCCCTTAGAGATTTGTTTGACTCCATGGATAAAACTTCTTCTAGTATTCCACCAATTATTCTACTGCAATTTTTGCACATGGCTTTTCCACAGTTTGCAGAGAAGGGCGAACAAGGACAGTATCTTCAGCAGGATGCTAATGAGTGTTGGGTACAAATGATGCGAGTATTACAGCAGAAATTGGAAGCTATAGAGGATGATACTGTTAAAGAGACAGATTCTTCATCTGCATCAGCAGTGACACCTTCTAAAAAGAAAAGTTTAATTGATCAGTTCTTTGGAGTTGAATTTGAGACGACCATGAAATGTACAGAATCTGAAGAAGAAGAAGTCACTAAAGGAAAGGAAAGTCAGCTTCAGCTTAGCTGTTTCATCAATCAAGAAGTCAAGTATCTTTTTACAGGACTTAAGTTGCGACTTCAGGAAGAAATCACCAAACAGTCTCCAACATTGCAAAGAAATGCTTTGTACATCAAATCTTCAAAGATCAGCCGGTTACCTGCTTACTTAACTATTCAGATGGTTCGATTTTTTTACAAAGAGAAGGAATCTGTGAATGCTAAAGTTCTTAAGGATGTGAAATTTCCTCTTATGTTGGATGTGTATGAACTATGTACACCAGAACTTCAAGAGAAAATGGTTTCTTTTCGATCAAAATTCAAGGATCTAGAGGATAAAAAAGTAAATCAGCAGCCAAAGACAGGTGACAAAGACAGTAGTCCCCAAAAAGAAGTTAAGTATGAGCCCTTTTCTTTTGCTGATGACATTGGCTCCAATAATTGCGGATACTATGATTTACAAGCAGTGCTAACGCATCAGGGAAGGTCTAGCTCTTCAGGCCATTATGTATCATGGGTGAAAAGGAAACACTTTAGATGAATGGATCAAGTTTGATGACGATAAGGTCAGCATTGTAACACCAGAGGATATCTTACGACTTTCCGGTGGTGGAGACTGGCACATAGCTTATGTTCTACTCTACGGGCCTCGCAGAGTGGAAATAATGGAAGAGGAAAGTGAACAGTAATCTTCATTTTAGCTATTTATGCTTAGGTGTGAAATAAATGTTATTTGTTGATCATTTCTATAACCCAGAGCTTTGGAGGAAGATTAGTTTAGGTGGTTTTATGTGTTTCCCCTCATGTGGAACAAGAGAGGGCAGAAGCAGACCACTCTGTGTTACCAACCTAAGAAATTACAGAAAAGAGAAAATTGCCTTTGGACTGTGCTGCCCTGTGTAAAGGTGGCAGGAAGAACTTTTTAAAAAGCTTATTGCTTGGATTAATTTTTAAAAATTATGAGTTGAAATGCCTTTCAACCATTATTACCTTCTGTGATAATTTTTCTGTCTTTTTCAGCCCAAGATTCAGCAATCAGATGTTTATTGCACACCTATTACTCTATTATTTGTTGTTCTTGCATGGTTCAAACCACCAGTGATCCAATAGCTGCCCATCCTTTGCCTTATCTAACACAAATGTTGCCAGGAAGGTGGAAGGAAGTAAGTTTGATCTCATTGTGTAACTCAGTGCTGCGTCCCCACCCCCATGCAAACATGGGTACAATCAAGTATTTGTCCAGCCTGACTGTTGCTGGCTTTTCATGACTTTAAAATAAATTGTGATCAAATAATAGTACATTTGATTATACATTTGTTACTGTGTCTCTGATGTACTATGGTTTGTACATTGAACTTTGCTATGGTTTTGTAGTAATGAACCTTAAAATGTTGACAAGCTCCAGTTGCTTATTTTTAGAAAATGAGGATATTTAATAAAAAAAGAAAAAAGAGGGACTAACAGCTTTTGACCTCAAGTCTTTTGTCTGTTGGAGCTTGGCTGAAGTTCAGATATGTTTAATACTATTATAGTTTCTGCAGATGGTTAATTATGCTCTCAAGCATCTATCTGAAAATAGTATCTTCTTCACCTGCTAGCCTAATACTGTTTAAAAAGAAACACAAAGTTGTGATTGGATAATGAATGCAACCATGTTTATCAGATCTGTTCTTTGGCTCAGTTGGGTGTTTGGTTCTACTCTGTCAACTCCCAACTTCATGTCTATCTCAAAATTTAATACCAGTGATTTTTAGGAGAAATATCAAGAGTATGAGATACT EMBV3_43762 GACAAAAAAATGAGTAGTGTTTTTTGAAGTTCTGGTGAAAACTGAAGTCTGATATTGCAG Gene GeneID:514739|MAP1B:XM_002696266:56_cdna Constitutive 2 NULL GeneID:514739 20 GENE MAP1B NULL microtubule-associated protein 1B EMBV3_40835 GGCCTGCTGCTGGGCCTGCTGTGAAATCTTAATAGGAAAAAACGAAAACAGCTCGGGGGA Gene GeneID:528252|TLN2:XM_002690844:178_cdna Constitutive 0 NULL GeneID:528252 10 GENE TLN2 NULL talin 2 EMBV3_29450 GCAGTGGTAGATCAGATTGGGGGGTCTGTAGCAAACTGGACTTTTAAGAACTGGAAAGAG Gene GeneID:505225|ADD3:NM_001075194:21_cdna Constitutive 1 NULL GeneID:505225 26 GENE ADD3 MGC139783 adducin 3 (gamma) EMBV3_28829 ACCGGGCTGATAAAGAACAGAAATGGCAGGAAATGGAAATGAGAGGTCTTCGGCGTCTGG Gene GeneID:614176|CCDC148:XM_002685379:307_cdna Constitutive 1 NULL GeneID:614176 2 GENE CCDC148 NULL coiled-coil domain containing 148 EMBV3_06844 ATTGAGTTTGTGGTGACCCAGCTCAAGTCCCTGGTGCTGACCTTGGGCCTGACGGACCTG Gene GeneID:513521|ATPAF2:NM_001075623:21_cdna Constitutive 0 NULL GeneID:513521 19 GENE ATPAF2 MGC139072 ATP synthase mitochondrial F1 complex assembly factor 2 EMBV3_13180 TATGAATGTGAGTCTTTCAGAATCCCCCGGAGAGAGAGGGCTCAGGCAGCGAACGAAGAA Gene GeneID:525174|LOC525174:XM_002691169:237_cdna Constitutive 0 NULL GeneID:525174 11 GENE LOC525174 NULL similar to F47B8.14 EMBV3_13323 AGGAGAACATGGCCACCCACTTCTCTCGACTCAGCCTGCACAATGACCACCCTTACTGCA Gene GeneID:535210|HCFC1R1:NM_001046398:240_cdna Constitutive 0 NULL GeneID:535210 25 GENE HCFC1R1 MGC137730 host cell factor C1 regulator 1 (XPO1 dependent) EMBV3_04546 GTATGTCCATCCCTGTCACCAAGGAGATGCTCTTCGAGTTCATTGACAGAAGTGGAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10557 GGGACCGATTTTAGCCACCAGGAGCCTTCTCTTAGTGCTTCCATTTCCTTTCATGCTAAG Gene GeneID:784346|LOC784346:XM_002693372:336_cdna Constitutive 0 NULL GeneID:784346 15 GENE LOC784346 NULL similar to Olfactory receptor 51A7 EMBV3_06823 TCTGTCCGTTGGGATTCTCTAGGCAAGAATTGAGTGGGTTGCTGTTCCCTTCTCCAGGGA Gene BVV0101_056153 + 0 NULL GK000025.2:27533989-27541407 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25704 CTCAACCACCCACTGGACGCACCCAGATGGGCCCAAGGAGAGGCCATGAAGGCAGTGCTG Variant GeneID:508569|LOC508569:XM_002694971:133_cdna 661^777 1 EMBV3_23909 GeneID:508569 18 GENE LOC508569 NULL similar to CG5913 CG5913-PA EMBV3_31914 TGGTCCAGTGGCTAAGATTCCACACTCCCAAGGCAGGGGGCCCAGGTTTGATCCCTGATC Gene BVV0102_082783 + 1 EMBV3_21216 GK000015.2:54618045-54686090 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065106 TCONS_00220903 2 XLOC_039828 XLOC_134220 NonCoding TCONS_00220903 XLOC_134220 NonCoding NonCoding - 7:47218693-47219255 - TSS164901 562 0.651245551601424 1 0 0 0 0 0 0 0 0 0 0 7.3211606789941e-06 0 0 5.61605106221095e-05 0 0 0 0.000649910358976239 0 0 0 0 0 6.52956809699439e-05 0 0 0 0 0 9.59788456852913e-05 0.000331636051948379 XR_229992.1 LOC101908939 PREDICTED: Bos taurus kelch repeat and BTB domain-containing protein 11-like (LOC101908939), misc_RNA. 1e-73 280 94.94 0.314946619217082 0 noncoding CCAATCATGTTTCAAAGAACTGGAGTCGAAACAGAGCATAACAGTACTGCTTACTGAGCTGAAGAGGCAGAGATCAGACTTTAGAGCAGCTAAGGCAACTATAATCTGAGAGGTAGGTCACTGAAAAGACGAGAGCTGTGGAACTTCCCTGGTGGTCCAGTGGCTAAGATCCCACACTCCCAATGCAGGGGGCCCAGGTTCGATCCCTGGTCAGGGAACTAGAGCCCACATGCTGTAACTAAGAGTTCCCACGCCATAACAAAAAGAGCTCACATGTCACAACTAAGATCCCACGAGCTGCAACTAAAAGCCAGCACAGACAAATAAATACATAAATATTTTTAAATAAATAACTTTATTCCTTGAGGAACTAGAAAAAGAAAAGCTGCTGCTGCTAAGTTGCTTCAGCCGTGTCCAACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATACATGAAAGTGAAAAGTGAAAGTGAAGTCGCTTAGTCGTGCCTGAC TCONS_00216909 . 3' 12666 TCONS_00216909 . 3' 13227 EMBV3_24854 TCCAGGAAAATCCCATAGGGTCACAAGAGAGTCGGACACAACTGAGCAACTAACACTTAC Gene BVV0102_018845 + 0 NULL GK000005.2:90848235-90899024 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41513 GATGATCTGTGCTGGCTATAAAGAAGGAGGAAAAGATGCCTGCAAGGGTGATTCAGGCGG Gene GeneID:533547|KLKB1:NM_001046352:64_cdna Constitutive 0 NULL GeneID:533547 27 GENE KLKB1 MGC128802 kallikrein B, plasma (Fletcher factor) 1 EMBV3_03812 AATCACCAAAACTGCAGCCTCCTCACAAATGGACTGGGAGAGTCATGCCCGATGGAAAGG Gene BVT0102_108452 - 1 EMBV3_25107 GK000006.2:108758213-108804876 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07679 GCTGTGCAGACGCTGGTATCCCGAAGAATACGAATTTGCACCAAAGAAGGCTGCTTCTCA Gene GeneID:540139|REXO2:NM_001081735:119_cdna Constitutive 2 NULL GeneID:540139 15 GENE REXO2 MGC148716 REX2, RNA exonuclease 2 homolog (S. cerevisiae) EMBV3_32419 AGTTGTAAATGAATGGATGGCGATGAGCCCCCAAAGTTAAACACAGCCCCTAGAGAGGTC Gene BVV0102_275718 + 0 NULL GK000012.2:70209105-70342710 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13606 TGTGGACACTGGACACAGATGGAGAAGCCCACTGAGTTGAATCGGATCCTCATTGAGTGG Gene GeneID:511716|EPHX2:NM_001075534:11_cdna Constitutive 1 NULL GeneID:511716 8 GENE EPHX2 MGC139743 epoxide hydrolase 2, cytoplasmic EMBV3_40316 CAGCCTATCCTGCGGAACACGGTCTCTTCTTGACCACCCTAGGACTCTTAGGTAGAAATT Gene GeneID:536375|TMEM229B:NM_001031768:172_cdna Constitutive 1 NULL GeneID:536375 10 GENE TMEM229B C10H14orf83 C14orf83 FLJ33387 MGC143289 transmembrane protein 229B EMBV3_34471 TGGACAAAGATGCTCCTTTGCGCTTTGCAGGTGAACGACGTCAACGAATATGCGCCCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13561 CAGCAGTGTCACAGAACTGATCGTTGTAAGCATCCTCTTGTGTTGGATTGTGCGAGCACT Gene GeneID:100271685|LOC100271685:NM_001145397:163_cdna Constitutive 1 NULL GeneID:100271685 15 GENE LOC100271685 NULL membrane-spanning 4-domains, subfamily A-like EMBV3_40801 GGGCTTGCGGGCTCTGAGATGGCGTTCATTTCCTTCTTGTGCTGAATCTACTTGTGTCTA Gene BVT0102_067946 + 0 NULL GK000022.2:52959211-53011768 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129115 TCONS_00129117 TCONS_00129116 TCONS_00129112 TCONS_00129118 TCONS_00129113 1 XLOC_078027 NonCoding TCONS_00129117 XLOC_078027 NonCoding NonCoding LOC100847162 22:52973803-52987150 = TSS96111 897 1 TCONS_00129117_1 46 0.0903010033444816 3 0.933013637044807 0.00281085842726161 0.00387895407082565 0.00285473995998051 0.00152962686086532 0.00143978057645804 0.000678413133984983 0.00259491915917322 0.000642349916707142 0.00169407489484126 0.00061650834979098 8.40220524266126e-19 0.00050821870394754 0.000693722280917304 0.000611121857981408 0.00228557753678121 0.000233826393547752 0.000465101949243399 0.00141601540580799 0.00559855851841813 0.00404957383840991 0.00422493998011915 0.00155898438022556 0.000388113991647459 0.000524116885342379 0.00356837130202885 0.00326014556506368 0.00243518359159819 0.000355895666208312 0.000212806796193041 0.00128704062067084 XR_232840.1 LOC100847139 PREDICTED: Bos taurus kelch-like protein 18-like (LOC100847139), 0.0 1618 100.00 0.998885172798216 NR_033373.1 KIF9-AS1 Homo sapiens KIF9 antisense RNA 1 (KIF9-AS1), non-coding RNA. 9e-20 102 77.27 0.146042363433668 0 noncoding 1 1 1 1 -0.0343054818565266 0.788101155467199 0.0241451638964379 0.775328621322488 GCCGCTCTCTCCCCCACACACTCACACGGGGAGCGACGCTTACCCCGCCCGCCCCTTAGCCGCACAGGCCCAGCCCCTTAAAGGGACACGCACCCGCCGCGCCTCCGCCGCCAGTCGGCGCGCCGGCAGCTGCCGGTAGTCCTCTGAGAGGAGCGGCGTGGGGAGCAGCTGTGCGGAGCCCGCCGACCCGGCCCGACTTCGCCTGCGACTTCCCGGAACAATAAGCCCCGGGCCCTAGCGCTGTCGGCCTAGCTCGGGGCCGAAAGCTGCTGCGCCGCGACCCCTCCCTCGGGCTTGCTGTGGCGGCTGGGGCGCTGAGGTGTGACACGGCGCGCCTCGGGGTTGTTTGCGGGCGAACAGCCCGAGCCCGCCCAGACACTACGAGCCTTCCTGCCCCGCCGCCCTCGAAGACCTGCCCTCCCGGAGCGCCGGAGTCCTCAGCGGCGCCGAGGGCCCCTCCCCTGGGCTTGCGGGCTCTGAGATGGCGTTCATTTCCTTCTTGTGCTGAATCTACTTGTGTCTAATCCATGGACTGTTTTCTCAACCCATCCTCTGATTTAACCTTGTTCATGGGAGAGCCCAGAGGACGCTCCATTTATCAAAGCAGTCAAGAATGCACAGGAAGCTCTCCTGCTCTTAGACTGAAAACCTGGCTGCTCTGTGTCTAGACTGTAGAAGTTCTGGAGATGAACAGTGCTGATGGTTTCACAACAATGTGAAGGTACTTAATGCCACTGAACTGTGCGCCTAAATACAGCACATGTCATCAGTGTGTTTTCTTCGTAACCTTGGAACTGCAACTTTCATTCCTTTAAGAGACGGAAAATGCTAGCTATATAACCCAGTTGTTAACAACTTTCCTCTTTGCCATTAAATCGGAATTACTTACTGTCAGAA EMBV3_23978 CTGCATCAGTGGGGAGAAGAGGGCTTTCTGACTCACATCGACAGGGTTACTGATTTCTAC Gene GeneID:520638|AADAT:XM_002689448:19_cdna Constitutive 0 NULL GeneID:520638 8 GENE AADAT NULL aminoadipate aminotransferase EMBV3_34995 CTGGAATGAGGAATACTGACATCTTCCATTTATTGGGGTTAGGCTTCCCCGATGGCTCAG Gene BVV0102_071314 + 0 NULL GK000024.2:33507330-33523336 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39604 TGGTCCAAAGCAAACTGTGTGAAGTTGCCATCTGGGAGCGCCATAGAAATGAGCCCAGGG Gene BVV0102_313840 + 0 NULL GK000003.2:108999454-109422555 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30338 CTGAGGGCACCTTCATCAGTGACTACAGTATCGCCATGGACAAGATCCGCCAACAAGACT Gene GeneID:511073|GIP:NM_001166605:88_cdna Constitutive 0 NULL GeneID:511073 19 GENE GIP NULL gastric inhibitory polypeptide EMBV3_06515 ATGCAAGTCTCTAACAGCTTAGAAGGGAGGCTGAAGGTGATGACTGGATACACAACAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12061 GCACAGAGATGCCGAATGAATGTAACCTAATAGAACCCTAATCACCCCGCTGTGCCCTTC Gene GeneID:281375|SERPINE1:NM_174137:44_cdna Constitutive 0 NULL GeneID:281375 25 GENE SERPINE1 PAI1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 EMBV3_05475 AAGAAACTTGGAGAGACGTACCCAAAGATCTCAAACGCCCAGAATGCAGAGCTGCGGCTG Gene GeneID:282040|RNPEP:NM_001097563:19_cdna Constitutive 0 NULL GeneID:282040 16 GENE RNPEP AP-B arginyl aminopeptidase (aminopeptidase B) EMBV3_29962 GAGTCTGTTACCCAAACACCTATCACATTCCAGCTGCCGTTTTGTGTCCACCACTGTCTG Gene GeneID:788287|LOC788287:XM_002689125:100_cdna Constitutive 0 NULL GeneID:788287 7 GENE LOC788287 NULL similar to Olfactory receptor 90 EMBV3_42427 GGCATTCAGACTTGTAATCCTTCCCTCATTCCCTGTTGGTTGTGTAGTTTTAGGATCAGC Gene GeneID:617723|CRIPT:NM_001034803:179_cdna Constitutive 0 NULL GeneID:617723 11 GENE CRIPT MGC128383 cysteine-rich PDZ-binding protein EMBV3_35473 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43435 TCTTTCACAAAAGGCATCCTTAGCATCATCCACAATTAGGTTAGACTGTGAGAATGTCAC Gene BVT0102_441853 + 0 NULL GK000030.2:110188381-110194390 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247953 1 XLOC_151464 Coding TCONS_00247953 XLOC_151464 Coding Coding TSPAN7 X:110055860-110189809 j TSS185550 2382 1 TCONS_00247953_7 249 0.226700251889169 8 0.982276704392749 5.133872144094e-25 0.000328003649365468 0.000120002739435525 0.000115397305367489 1.76820339696416e-05 1.11391577456424e-32 6.45531129963689e-06 0.000111384882144747 7.07805921704312e-36 3.20390265636138e-203 9.26350399649061e-16 1.33446687754566e-220 2.70226599289458e-07 1.1625676093436e-50 1.41739750493431e-05 3.62400981646159e-154 1.7327416766807e-19 0 1.60070016483408e-05 7.98906187034981e-05 4.17587258688746e-42 0 1.50211340560074e-202 0 0.000205091680521502 5.18469113197109e-05 0.000317042971241388 1.07259179534447e-87 3.3722413818264e-223 3.62756890113518e-42 NM_001076384.1 TSPAN7 Bos taurus tetraspanin 7 (TSPAN7), mRNA. 0.0 1433 100.00 0.332913518052057 NM_004615.3 TSPAN7 Homo sapiens tetraspanin 7 (TSPAN7), mRNA. 0.0 1229 93.19 0.343408900083963 TCONS_00247953_7 sp|P41732|TSN7_HUMAN TSN7_HUMAN Tetraspanin-7; 0.0 503 97.59 0.995983935742972 1 coding 0 0 0 0 GTTTTTCATTCTTTCACAAAAGGCATCCTTAGCATCATCCACAATTAGGTTAGACTGTGAGAATGTCACTGTTTTGACTGCAGAGTCTCTTAGGAATCCAGCAAAATCTCCCACAGAATCTGTACTGTGTGTTCCTCTGCAAACCAGCCACAGGAAATCTGGGTGGAGTGTACATTGCTTTTTTATTGGGATATAATTCATGTGCTATAAAATTCACCCTTTTAAAGTGTCCAATTAAGTGGTTTTTAGTATATTCACAAAATTATGCAGCCATCATCACAATCTAATTCCAGAGCATTTTTGTCACTCCCCAAAGAAACCCCCTACTCATCAACAGTCGCTCCTCATTCCTGTTGCCCCCCTGCAAACTAATCTATTTCTGTCTTTATGGATCTGTCTATTCTGGACATTGCCTATAAATGGAACATTCAGTATGTGGTCTTTTGTGTCTGGCTTCTTAGCATATTTTCAAGGCTCAAACATATTACAGCAAATATCAGTGCTTCGTTGTTTTGTGTGTGTGTGTGACCAAATAATTTTCCACTGTATGAATGTGCTACATTACGTTTATCTCTTCACAAGTGATGGACATTGGGGTGCTGTGAACATTCATGGGCAGGCTTTTGTGTGGACATGTTTTCATTTCTCTTGGGAGTGGAACCACTGGGTCATATGGTAACTCTGTGTTTAACGTTTTGAGGAACTTCTGAATTGCTTTCCAACCTTAATTTTTGACCTTAAAACAGTTCTTTCCTGAGTGTGAGCTGGTCTGTACTTGTTAGGGTGGGGAACATGAGTCTCAGGGACTTTAAACACTTTTTTTTCTGTTATACATTTTATGTGAAGAATGAATGGTACTTTCACATAGAACCTTGTCATTCGGCTTCCAAAATGTCAAGAAAGCATGGAGCGCCCGTGGTGGCAAGGACTGGGGGTGTCTGTCTGAGCTCCCGTGTTCCTAACCATCCCTCCAGCTGTATCTCCGGCCACCTGTCACAGTCTGTTACTGGCACAGACAAGGCCAGCTTGTTCCAAGGACACGACTACTGGGCCACTTCCATCTCAGATGGCCTGGTGGGCCGTCCAAATGTAGAAATCCGATTGCTTTCCGGGGATGGCAATAAACCAGGTGCAGACAATCCTGCAAATGGAAAGCCCTACTGCGTACAAAGCAAAAACTCTTCTACTCACTCCCGGAGGCCCTGCCCCACTCCTCGGCTGGCTGGCTGGCTGAGCCTGTGCGGATTCGCGCGGGCGAACGGCCTCCTCCGCATGCGCAGTTTCCGCCGGTCGATTCCTTAAGTGGGCGCTCTGCCGGGTGCGCGCTCAAGCACGCGCGCAGCCTCGCGTGCACGCGCGCACGGGGCCTCTAGCCGCACGCGCCCCTGCCCCGCCACGCCCCGCCCCCTCCCCCCTCCCGCGCGCCCGCCCGCCTCCAGCCGCCGCCGCCGCCGCCGGAGCTCTGTAGTATGGCATCGAGGAGAATGGAGACCAAACCTGTGATAACCTGTCTCAAAACCCTCCTCATCATCTACTCCTTCGTCTTCTGGATCACTGGGGTGATCCTGCTGGCCGTTGGAGTCTGGGGCAAACTTACTCTGGGCACCTACATCTCCCTTATCGCCGAGAACTCCACAAATGCTCCCTATGTGCTCATCGGCACTGGCACCACCATCGTCGTGTTTGGCCTGTTTGGATGCTTTGCCACATGCCGTGGTAGCCCATGGATGCTGAAACTGTACGCCATGTTTCTGTCCTTGGTGTTTCTGGCTGAGCTCGTGGCTGGCATTTCAGGGTTCGTGTTTCGTCATGAGATCAAGGACACCTTCCTGAGGACTTACACAGACGCCATGCAGAATTACAATGGCAACGACGAGAGGAGCCGGGCAGTGGACCACGTGCAGCTCAGCCTGAGCTGCTGTGGCGTGCAGAACTATACCAACTGGAGCACCAGCCCCTACTTCCTGGAGCACGGCGTCCCCTCGAGCTGCTGCATGAATGACACCTATTGCAACCCCCAGGATCTGCACAACCTGACTGTTGCCGCCACTAAAGTGAACCAGAAGGGTTGTTATGATCTGGTGACCAGTTTCATGGAGACCAACATGGGAATCATCGCTGGAGTGGCTTTTGGGATTGCATTCTCCCAGCTGATTGGCATGCTGCTGGCCTGCTGTTTGTCCCGGTTCATCACGGCCAACCAGTATGAGATGGTGTAAGGAGGACCTCATCAAAATCAATTTAAAAATGAGTGTGAAGGGGGAACAAAAGTCAAGATATTTTTAAAAGATCTTTAAAAATGCCTCTGTCTCGCATGCCAACAAGAATGCATTGATATTGTGAACATTTGTGATACATGTATTAATAAATAGTCATTACAAA EMBV3_20205 GTACACGTAGACCGCATCACCATGAACAGAGAGGTTATTGCTTGTTCTGAAGGCTGTGCG Gene GeneID:337901|PAG7:NM_001109978:123_cdna Constitutive 0 NULL GeneID:337901 29 GENE PAG7 NULL pregnancy-associated glycoprotein 7 EMBV3_06898 TGCATGGAGCCGGTAGACAAATCATGGTGGGAGGGTAATGTGAAGAGCTCCATGAGTTCT Gene GeneID:618195|LGI4:NM_001103301:769_cdna Constitutive 0 NULL GeneID:618195 18 GENE LGI4 MGC160066 leucine-rich repeat LGI family, member 4 EMBV3_36033 CACCAAGCAAAGAAAGAAAAATGTTTTGAGCCCACGGCCGGCAATCCCACTCTCCCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00618 GGTTAGAGCTTTTTGGGTCTGGTTTAAGAAGTCCTTCCTATTTGAATATCATAAAGATAG Gene BVV0102_099757 + 0 NULL GK000015.2:45138884-45155694 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02304 TCTGGTTGCACAACAGTTAGGCATGCTAAGGACTATATTTGTGAAGTTTGGATGCCTGTG Gene BVT0102_004962 + 0 NULL GK000005.2:9276919-9352193 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190856 TCONS_00190857 1 XLOC_116755 NonCoding TCONS_00190857 XLOC_116755 NonCoding NonCoding - 5:9345033-9347487 - TSS143139 2170 4 TCONS_00190857_3 72 2 0.116184264166327 0.00140497111984638 0.00139477452067734 0.00089755649463576 0.000380175818212443 0.00140777795709053 0.000651463640086087 0.00112746896389208 0.00068161511062233 0.00220209446761173 0.000429975200169945 8.07007616727262e-05 0.000446119443925053 0.000205992388841186 3.33853607600955e-10 0.000615960737070447 0.00327302615634413 0.00183278149015307 0.00333336462201888 0.000928611145377484 0.000776696638434405 0.000650498195296577 0.0012941950921446 0.00161409805983609 0.00494530223771351 0.00160402856361874 0.0013062336567983 0.00117251619033878 0.00071496534477299 0.000170807989872067 0.000355937106107191 XR_226703.1 LOC101905665 PREDICTED: Bos taurus uncharacterized LOC101905665 (LOC101905665), 5e-09 68.0 83.08 0.0294930875576037 NM_001143886.1 PPP1R12A Homo sapiens protein phosphatase 1, regulatory subunit 12A (PPP1R12A), transcript variant 3, mRNA. 0.0 2783 91.25 0.909677419354839 0 noncoding ACTTATCATAAAAAAACTAGTTCTCAGATTCTGCACACAGATAGCTTTATGTAAAATATATAAACATTTGTTCAAATTGATACACAGATTGCATAAATATGGCAATTAAGCTTAAATTTACAGATGTGCATGTACAACGTTGTGCAAGTTATCACAATATTACAATTTCAAAAATTATACCAATGGAATCCAAGTAAAGCAGTTAGTGAAGATACCCATGCAGAATTTAAATATCAGAACAAAGTTTTAAACGTCTTCAGTAAAAGTTCACACATTTAAAATAGTTTTATTCATTTTATTTGTATATGTCAAAATACATTTTTATTTCCAAAATAGTGGGTTTTGCAACTAGTTTCATGCAGAAACAAGGTCTGCTCAATACTACCAATAAAATCAATATAGCACAGTAGCTGTTCAGTTTTAGATACAAAGAATAAATAACCTAAATACAAAACACTAAAACATTAGAAACACGTATTTAATCATTCTTCACAGGCATCCAAACTTCACAAATATAATCCTTAGCATGCCTAACTGTTGTGCAACCAGAATATGTTGCAGTCACTCAAACTGATCAATTATCTGTATGTTTTACGTCCACGTAAGACCATGGAAATTCTCTATATTCAGACCCACCATTCATACAGTTCAAATGTAACCAAAAATAAAGTTCCCACAACTATCCTTGTACCTTTAAAAATCAAGAATCCTGAGCTTGGTAGTAAGAGCATAACCTTATATCTTCATAAAACCAATCAAGAGAGGACTTAAAATCCTGCTTACCAAAACACCCTTTCCCAACCCCAACGTAATCTAAAATAGGCAGTAGAACACAATGACCTTTTAAAATGAAGGGGTACAAATTCACATTGAATAGTATACAATACAATCAATAATACAATTAGCTACTATAAGCTTTACAATGTACAATTTATTCAAATGGCTGAACTGTTCAGTGGTTAAGGAGACAGTTATGTGCCAGAAAGATATAGTACTTTTTGCATGGTTTAATGAAAATATAAAAGCTATTTGTCCAAATAAATGCCATCTTCACTATTTACTTGGTTTTGCTTTTCTTTTTCTTTTTTTTAAAAAAGGCCACTGAAATGTATAAAATGGTCTGAACATGATGGTGGTATCAAAGTCAATGCCTCTTCACATGGCAATAACAGTGCATTTAACACAAACTCACGGGTTAAGTCTGCAAATGATTTCATAGCATTACTTTGGCTAGCACAACAGTTTTAGACAGCACTCAGATAAATATAGGTATGTGAAATGTGAAGCAATTATCTTATGCAACTTTAATTATGGTTGAATACTATCAAATGAAAACTGCAAATAAAAGTAAAAGCATTTTACAGTAGAAAACTTTTGTAAAGATAGGGCTCCACATAATGTGTTAATTTAAGTCTTTATATCACTTTGTTAGTAAGTTTTGTTCTTAACACTATTATGGAGTAGCCTACTTTGCATTAACAGACATTTGAAATAATAGTCAAGCATGCCATGTGGTGGTCTAAAAATCAAACAATACACTTATTTATATATACAGCATCACTCAGTACCTGCTAAAATGAATGTGAAGATTACAGAACCTAACATCTTACACTACAATAATAAAAAACAAACAAAAACAAAAAAGTGACCAATGAAGGCAGAAAATAGGACTTAAAAGAATCTAATCTCAAATGACTTTAAAGCATTCATAAAAGGAATAAATGCATATTGCACAAACAGTGAAAGCAAATGTTCCACCAAGCAATTCAGTTCCAGGTGGGGACAACAACATTAGCCTAATATATGACAATGATTTCAGAGGAGCAAGTGTTCTTTTCTGTAAATGAGAAAGCTGTGAGACGACAGAAAGTCTGCCACATGAAGAGTTAGAAGGAAAAGATACAAACCCAAACTTAGATGTAAAGCAATAACAAAACAAAATAAAATAAAATTAAATATTGAAAAACTGCAAACTGTGGCATGGCACATCCAAAAATGACAGTCTCCAAGGATTCTTCCCAGGCTTCCAGTGACGGTCAATTATGGTCCACTGGGTTACTAGTATGTGCAATTCCATTACTTGCTGCTTTTTTTTATTTGGAAAGTTTGCTTATAACTCTGATCAAGGCCCCATTTTCATCTTTTAGCCTCTGGTTGTCTGCTTTCAGNN TCONS_00193948 r 3' 3867 TCONS_00193948 r 3' 6320 EMBV3_34048 CCTCTGGGGCTATGGAGGCCCCTGAGCCTGTGTTCCTACCTTCACTGTGATCCCTGAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27700 GATTATGGCTCAGCCTTGCGTGGCCTGTGTGAAGACACCCTGGAAGGACTGCTCTTTCTG Gene GeneID:767943|TTYH1:NM_001077015:199_cdna Constitutive 0 NULL GeneID:767943 18 GENE TTYH1 MGC128547 tweety homolog 1 (Drosophila) EMBV3_25173 GGGAAGCCTGTTCGTGAAGTGGCTGCCAAGGTGGTGATAAAGTGCTGCTGCACTTTGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05975 AGGTTTTAGCCCTTCCTTTGATTCCTGAGGGCTTATTGTGTGCCAGGAGCAGGTCTAGGC Gene BVV0101_051729 - 1 EMBV3_07817 GK000013.2:77673995-77822893 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06022 AAGACCACCTTCTGCGGCCCTTGTGAGAACTGGAAGCAGCACGGCAGGTTGATCTTTGTC Gene GeneID:534963|GPRC5D:NM_001105412:107_cdna Constitutive 0 NULL GeneID:534963 5 GENE GPRC5D MGC159993 G protein-coupled receptor, family C, group 5, member D EMBV3_21745 GCTGCAGGAGCTGCTTGTATGCTTTTGCTGAGTCTTCTGTGAGAACTCCACTGTCTCTGT Gene GeneID:617606|DEPDC6:NM_001102312:94_cdna Constitutive 0 NULL GeneID:617606 14 GENE DEPDC6 MGC159504 RAPGEF4 DEP domain containing 6 EMBV3_00034 CTTGCTGACTAGTGGGCTCAGCAGGAGCATCCATATCCTTACTATGTCTGGAGTGTGCTT Gene GeneID:613749|RAB5C:NM_001034743:213_cdna Constitutive 0 NULL GeneID:613749 19 GENE RAB5C MGC139406 RAB5B RAB5C, member RAS oncogene family EMBV3_26506 GTGGTCGCTGTCTTCCCGGCTCTTGCGCGGAAGCAAAACCAGCCCCAGAAATATTTGAAA Variant GeneID:767983|SDHAF2:NM_001077045:130_cdna 125^458 2 EMBV3_25457 GeneID:767983 29 GENE SDHAF2 MGC128747 succinate dehydrogenase complex assembly factor 2 EMBV3_12472 CAGCATGTTGGGCTGAAGTAGCCGTAAGTAAAGGTGCTGTCTCAACACTAACAGAAGGAG Gene BVV0102_420555 + 1 EMBV3_28161 GK000001.2:93633361-93789330 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30202 TACGGCGCTCATCCCTTGGCAGAAGTTCACGGGCTTTTCTTACATGCCTGTTCTCCTCAA Variant GeneID:532418|RG9MTD1:NM_001046323:17_cdna 78^146 1 EMBV3_32094 GeneID:532418 1 GENE RG9MTD1 MGC137283 RNA (guanine-9-) methyltransferase domain containing 1 EMBV3_16342 CGGAAAATCCAGGGACTCCTAAAGTCGTGCCCTGACCCTCTCTGGCCTCTGTGACCTGCT Variant GeneID:615348|PPP1R14A:XM_002694966:118_cdna 496^634 1 EMBV3_27273 GeneID:615348 18 GENE PPP1R14A NULL protein phosphatase 1, regulatory (inhibitor) subunit 14A EMBV3_20747 GAATGAAACCCGTGTGTGAACCGTGCCAGAGCCAAGAAATGGGAACTGGGAGTAATGATG Gene BVT0101_070205 + 0 NULL GK000020.2:6365491-6595533 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114306 TCONS_00114307 1 XLOC_069264 NonCoding TCONS_00114306 XLOC_069264 NonCoding NonCoding - 20:6590158-6594337 - TSS85292 587 1 TCONS_00114306_1 50 0.211243611584327 2 0.859980852082336 0 0 0 0 0 0 9.93335964959384e-06 0 0 0 0 0 0 0 0 0 0 0 0.000428532647473851 0.000159263581328614 0 0 0 0 0.000330488401782894 2.40029766876776e-05 9.98002650528486e-06 0 0.000107511612233474 0 XR_225993.1 LOC101904134 PREDICTED: Bos taurus uncharacterized LOC101904134 (LOC101904134), 2e-14 84.2 78.18 0.182282793867121 0 noncoding GGCAAGGATCTTTCCTGGTGAGCCCTGGTGGAGAACTGCTGTCTCCTCATGAGGAGTGTCAAGACTTACCCCTCGGATGAGAGCAGCCATCTTGTCACCAAGAGAATGAAACCCGTGTGTGAACCGTGCCAGAGCCAAGAAATAGGAACTGGGAGTAATGATGACACAGAGAGCTACCACAGCAACCCCAGACTGCTCTAGTCTTCTCCATTACTCGACAACGAACACAGTCCTCACGGAAATTCAAAGTTAAACACTATCTCCTTGCTGTGGCTAGGAACAAAGAACACTCTTCTCTACTATGGATACTTACTAGATAGATGCTTTTCTGATTTGGCTGCTGTCCTAAGGAGCGGCATTCTGAAGAAATCAGCGCTCCCTGTGATTTACCTATCTGGTATTTGATGAAGAAAACACACTGCTCCCTGACCCTGAAATGAGTATCTTGGGACTTCTCTGGTGATCCAGTGGCAGAAACTCCCCGTTCCCACCACAGGTCCCAGGTTTGACCCCTGGTCAGGGAACAGGAGCCCACATGCCGCAGCTACAAGTTTCCGTGCTGAAGTGAAGGTCAAAAATAAATAAAC TCONS_00113191 TCONS_00113192 r 5' 4779 TCONS_00113191 TCONS_00113192 r 5' 1125 EMBV3_21949 CTCCTGCAAAGCACACCACAAGCTCAGTCCATGTTCTCAACCCATCAGCTTCAGTTCACA Gene BVT0102_134106 - 0 NULL GK000016.2:43478363-43481407 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247689 TCONS_00067293 TCONS_00067291 2 XLOC_151397 XLOC_041400 Coding TCONS_00247689 XLOC_151397 NonCoding NonCoding LOC100848809 X:94310322-94332789 = TSS185425 960 2 TCONS_00247689_2 56 2 0.957357785097481 0.00617925726215495 0.00588252087492964 0.00673807254411039 0.00584750220459583 0.00549260945324135 0.00196738001614477 0.00478888146568262 0.00386305373838261 0.006764143179962 0.00621674123993736 0.00293301923003414 0.000845500435183721 0.0041246066882588 0.0102581652745716 0.00748323844628235 0.0798810952589448 0.021721321068732 0.0335590618087689 0.00265921374316163 0.00354328203348624 0.000724147848913076 0.0334936101582739 0.024626690753709 0.0257756349645191 0.00665423122911345 0.00524006393884736 0.00311267850419692 0.00613663810394471 0.00494057350807856 0.0100893025131582 XR_237771.1 TARDBP PREDICTED: Bos taurus TAR DNA binding protein (TARDBP), transcript 2e-104 383 96.58 0.241666666666667 XM_005263435.1 TARDBP PREDICTED: Homo sapiens TAR DNA binding protein (TARDBP), 0.0 1472 95.49 0.966666666666667 0 noncoding GGTTACTTCCTTTTTTAGTTTTGTTTTTGTTTAAACACTTGTCTCCCTTCATATACAAAAGTACAATATGAAGCCTTCATTTAATCTCTGCAGTTCATCTCATTTCAAATGTTTATGGAAGAAGCACTTCATTGAAAGTAGTGCTGTAAATATTCTGCCATAGGAATACTTCTGTCTACATGCTTTCTCACTCAAGAACTCGCCATCACGCTGCGCAGGCTGCGTCTTTGACGGTGGGTGTCCCATTTTTATCCGCTACTCTTTATTTCATGGAGTCGTATCAATGCTATGAATGCAAGGCTGTGATATGGAACCAGAAGGCTGTCTGAACTTTTGAAACCTTGTGTGGGATTGATGGTGGTGCTGAGGCATGAGAGGCTAGTATGAGCGAGAAAAGGAGAGAGCGTGTGCAGAGACTTGGTGGTGCATAATGGATATTTTTTAACTTGGCGAGATGTGTCTCTCAGTCCTGTGGCTTTGGTGAGAGAGTGTGCAGAGAGCAAGGATAGCAAATAATGTACGAATGTTTTTGCATTCAAAGGACATCCACATCTGTTGGAAGACTTTTAAGTGAGTTTTGTTCTTAGATGACCCACGTTAGCTGAATGTGTTAAGTGAAACGATACTTGTATTTCCCCTACCCCTTTGTCAACTGCTGTGAATGCTGTATGGTGTGTGTTCTCTTCTGTTACTGATCTGTAAGTGTGGTAATGTGAACTGAAGCTGATGGGTTGAGAACATGGACTGAGCTTGTGGTATGCTTTGCAGGAGTACTTGGAAGCAGAGTTCACCAGTGAGCTTGGGGTGTCTCAAAGCAGGGTGGAAGTTCTCATGTCTGTTAGCTACCCATAAGAATGCTGTTTGCTGCAGTTCTGTGTCCTGTGCTTGGATGCTTTTTATAAGAGTTGTCACTGTTGGAAATTCTTAAATAAAACTGATTTAAATAAAAAAAAAATAAAA EMBV3_28450 CTTCCCCTGGATACAATCACTTTCTACAAGATTATGGCGACAAGCTGAATATGGAGCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34296 GGACACACAGGAAGCTGGCCTGGGGAGGCTTTGCTCTTTAACTGTGCCTTTTCTTAGGAT Gene GeneID:520027|PLEKHG3:XM_002691067:505_cdna Constitutive 0 NULL GeneID:520027 10 GENE PLEKHG3 MGC129096 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 EMBV3_23880 TGTTTGACCATGGGGGATTGGTGCAGAAACTTGAAGCTGTTTGTGGTATGTACAACTCAG Gene GeneID:540504|SYNE2:XM_002691063:493_cdna UTR3_Alt 2 NULL GeneID:540504 10 GENE SYNE2 NULL spectrin repeat containing, nuclear envelope 2 EMBV3_03117 CTTTTGACCAGTAACCACCTTCCTTCAAACCCTCAACCCCCTCCAGATTCCTGATCTCCA Gene GeneID:513053|OLFML2B:NM_001100354:266_cdna Constitutive 0 NULL GeneID:513053 3 GENE OLFML2B NULL olfactomedin-like 2B EMBV3_17860 GATCAAGTTCCAGATGAAGAAGGTGCTGTGTCTGGCAGTGGCTGTTGGCCACGTGAAGAT Gene GeneID:533310|RPL10A:NM_001015647:50_cdna Constitutive 0 NULL GeneID:533310 23 GENE RPL10A NULL ribosomal protein L10a EMBV3_35510 CATTACGGAGGCGGATCAGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGT Gene BVT0102_092909 + 1 EMBV3_42234 GK000009.2:88500754-88612922 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022895 TCONS_00220566 TCONS_00107436 TCONS_00038669 TCONS_00207934 TCONS_00170890 TCONS_00206300 TCONS_00242416 TCONS_00207933 TCONS_00205125 TCONS_00188145 TCONS_00048805 TCONS_00219592 TCONS_00165978 TCONS_00125692 TCONS_00148960 TCONS_00002600 TCONS_00218429 TCONS_00123823 TCONS_00246739 TCONS_00242415 TCONS_00000529 TCONS_00232829 22 XLOC_013565 XLOC_133883 XLOC_063346 XLOC_022492 XLOC_126448 XLOC_103679 XLOC_124877 XLOC_149080 XLOC_124587 XLOC_114188 XLOC_028936 XLOC_132911 XLOC_100818 XLOC_077234 XLOC_090838 XLOC_000643 XLOC_131749 XLOC_075375 XLOC_151107 XLOC_149079 XLOC_000141 XLOC_142312 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_42127 AACTGCAGAAGATACATGCAAATGCTGATGCAGGATGAGGAAGGGTCAGAGAGGAATCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21819 TGACTGGCACCAATGTCACAGACGCCCACTTTCTGTTCCTGCATCCGCAGTGATGATGTA Gene GeneID:507949|GLYCTK:NM_001045987:103_cdna Constitutive 0 NULL GeneID:507949 22 GENE GLYCTK MGC127775 glycerate kinase EMBV3_16688 GCCCTCCGCCTGGTCAAACCTGGAAATCAGGTATGCTGTCACACCAGTTGAAGCAGCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36404 AACCTCTCTGATCACCTCACTGGAACATTCTTTCGGAAAGCAAACACCTAATCCTTACTG Gene BVV0102_198923 + 0 NULL GK000030.2:126303728-126349636 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245654 TCONS_00245655 1 XLOC_150789 Coding TCONS_00245654 XLOC_150789 Coding Coding KLHL15 X:126274054-126308491 j TSS184362 6839 1 TCONS_00245654_5 604 0.0359701710776429 4 0.801515855500058 0.000252905523987302 0.000159842142496987 0.000236234965734915 0.000131797552570611 0.000137524063953163 4.33646438295701e-05 9.37160315952403e-05 0.000264504810541311 0.000255136984618044 0.000193828007069585 0.000130409044299332 0.000145515414291229 0.000107313070312009 0.000657256418924034 6.74169460730335e-05 0.00168737559230761 0.000210366431862534 0.000976261794714987 0.000240102595225423 0.000415663961157908 0.000133742821060444 0.0010716069472881 0.00010037563191042 0.000833360641025168 0.000139545618086817 0.000196749749318241 0.000128123891767464 0.000169932743905697 6.19995485316536e-05 0.000273625645598628 XM_005228361.1 KLHL15 PREDICTED: Bos taurus kelch-like 15 (Drosophila) (KLHL15), 0.0 5312 100.00 0.430472291270654 XM_005274595.1 KLHL15 PREDICTED: Homo sapiens kelch-like family member 15 (KLHL15), 0.0 5092 89.58 0.556514110250037 TCONS_00245654_5 sp|Q96M94|KLH15_HUMAN KLH15_HUMAN Kelch-like protein 15; 0.0 1258 98.51 0.998344370860927 8 coding 0 0 0 0 0.124348808912654 0.721054672577479 0.054573340792178 0.367188104686241 AGTGACGCACGCTGGCTGAAAGATGGCGGCATTGGCGCTCGACCAGGGGGAAGGACTGGTTTCGTGGGGGCCGCAGGCGCGCACTCTCGCCCCCCGCCAGAGCGCCCTGGCTCGGCCCGGGAGCGGCTTCTTGTAGACGTTCGAGGAGCCTGCCGAGTGCCGTCCCGGCGCCCGACCGCCCACCGTCCGGCCCATTGGCCCGCTTCTTCCTGATGCAGACTGCCGTCCACTAGAGGCTGGACAGACCCCCGAGGTGATCCATGGCAGGGGACATGGAAGGATTCTGTTCCTCCATCCATGACACCAGTGTCTCTGCTGGGTTCAGAGCACTGTATGAGGAGGGATTGCTTCTTGATGTCACTCTGGTTATTGAAGACCATCAGTTCCAGGCCCATAAAGCACTCTTGGCTACCCAGAGTGATTACTTCAGAATTATGTTTACTGCAGACATGAGGGAGCGGGATCAGAACAAAATTCACTTAAAAGGTCTAACTGCTACAGGCTTCAGCCACGTCCTTCAGTTTATGTACTATGGAACTATAGAACTGAGTATGAGTACAGTTCACGAGATTCTTCAGGCTGCCATGTATGTTCAACTTATAGAGGTGGTGAAGTTCTGCTGCTCTTTCCTGTTAGCGAAAATCTGCTTAGAAAATTGTGCAGAAATTATGAGACTCTTAGATGATTTCGGTGTAAACATCGAAGGAGTCAGGGAGAAGTTGGATACTTTTCTGCTAGACAACTTTGTACCACTCATGTCCAGGCCTGACTTCCTGTCTTACCTGAGCTTTGAGAAGCTCATGTCTTACTTGGATAATGATCATCTGAGCAGATTCCCAGAGATAGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGGCATGATAGAAGACGCTGGAGACATACCGATACCATCATTCAGAACATCAGATTTTGTCTGATGACCCCATCCAGTGTTTTTGAAAAGGTTAAGACATCAGAATTTTACAGATACTCTCGACAGCTGCGCTATGAAGTTGACCAAGCATTGAATTACTTTCAGAACATTCACCAGCAGCCTCTGTTGGATATGAAATCAAGCCGCATCCGCTCTGCCAAACCCCAAACTACAGTATTCCGAGGCATGATTGGACATAGCATGGTTAACAGTAAAATACTTCTCTTAAAGAAACCAAGAGTCTGGTGGGAACTAGAGGGCCCACAAGTACCTCTGCGTCCAGACTGCCTTGCTATCGTCAATAACTTCGTATTCTTGTTGGGTGGGGAAGAGCTGGGTCCAGATGGCGAATTCCATGCTTCTTCCAAAGTGTTTAGATATGACCCAAGACAAAACTCCTGGCTCCGAATGGCAGACATGTCTGTGCCACGTTCAGAATTCGCAGTTGGTGTTATTGGGAAGTTTATTTATGCTGTAGCAGGCAGAACCAGAGATGAGACTTTCTATTCAACTGAGAGATATGACATCACCAATGATAAATGGGAATTTGTGGATCCTTATCCAGTTAACAAATATGGACATGAGGGGACAGTGCTCAATAACAAGTTGTTTATCACTGGTGGAATCACCTCATCTTCCACTTCCAAGCAAGTATGCGTGTTTGACCCCAGTAAAGAAGGGACCATAGAACAGCGGACCAGGAGAACGCAAGTAGTTACCAACTGTTGGGAGAATAAGAGCAAAATGAATTATGCCAGATGCTTTCACAAGATGATTTCATACAACGGCAAGCTTTATGTCTTTGGTGGTGTCTGTGTGATCTTGAGAGCCTCTTTTGAGTCTCAGGGATGCCCTTCCACAGAAGTGTACAACCCAGAGACTGATCAGTGGACCATCTTGGCATCCATGCCAATTGGTAGAAGTGGCCATGGTGTGACTGTGCTGGACAGACAAATAATGGTTCTTGGAGGCCTTTGCTACAATGGTCATTACAGCGATTCTATTCTCACCTTTGATCCGGATGAAAACAAGTGGAAGGAAGATGAGTACCCGCGGATGCCCTGCAAGCTGGATGGTTTACAAGTATGCAACCTGCATTTTCCAGAATATATTCTGGATGAGGTCAGACGTTGCAACTGATGACATCTTTCTCCCTTCAAAAAAGCCAAACAAAATCCATTTGTGACAAAGTAGTTAATTAAAAAACATAAGAAAAACCTCACCAGTTTTACTATCAAAGCCATTGGTCTAATATCGTAAAAATGTTTTCATTCTGTGCTAGCATCCTTTTTTTTCTTTTTAGTGGCCTCAAACTCATGCAATAAGTCAGTTGTAAGTGCTAGCTCTTGAAACTACTTCCAGAAGCAGTTTAATAGAACAATTCACTTATCTGGGAAGTTGATGTTATGCTTTAAACATTTCTTTCAAATGTCAGTGTAGGAGTCATGCATCTTCTAAGAGAAGACCTGATAAGTGTCACTGGATGTAATTTCAGTTCCTATCTCTAGCTGAAATCTTTTTGAACATTTATTTCAGTCTGTTAGACTTTTTGATTTTATTATTTAAGTTTAAAACTCTTGACCTTTTTGCATGGCTTTTTGCTGAAAACGCAAAAGTATAAATTTTCTACAAGATTAACTTTTTTATATTCAGAACACTATTTCTAAGCTGCCTTCTCTTACCTGCATTGTGTTAGTGAAAGCATATCCATACTTGCTTACATCTTATGAATATATAAGGCACATCCCCTTTTATGCGTGGTTAGGATTCTATATTTTTAAGCTAGTGCACTTGCACACACAGTTTGCCATACGTGTTGTATTTTAGATGTAACGTCTTTTCATGTATTAACATTTTTAGAAAGATAATAACTGGAGTCCTCGTTTCGTATCAGAGTAGCCTATCTTCAGTCCATACTGATTCAGTAATATTCAAACTCCTTATATTCCTGAAACGTATGGTTTTATGAAAGCTAACATTTTATGTTTTACTTTCAAAAGTAAACATTAGTGTTCCTTATCGATGTATGTCTTCTTTTTGAAAATGTTTTTCTTTGCAGTCTGTTTAATGTTACCCTGTTTTTAGTGAAAATTGGAGTGGTATGTGACAAGGCCTGGTCCTGCAGCGTGCAAGCACTTTTAAAGAGAACTTAGGTAATACCAGACTCCTAAATAAAGGCCCCTTCAAAGTAAGTGCAACTCCCATTCTTTGCATTCAATAAGGCTGCTGCATCTGTTATTGAATGGAAAGTAGCAACTTGTGGAAAATTTGAGCTCAGTTTTGACTTCGAGGTAAGGAATAGAACTATAATATTAACTGGTCATATCTTCTTGTTTATTTAGTACAAAATATTTAGTGGCGCTGGGGATGTAAGCCCTCAGCTTTTGTTTTATTTACTGAGAGCTACTAGCATGAAGGATAGTAACCTCCAAGTTCAGAGTGGATCAAGAATAACTGTTCAAAATCATTCTTAAGTGTTTTAGGATTAGCCGCACCTTTCAACTCTTTCAACTCAAAGGAAAAACATATAGTTGTCAAAATTAAGCAAGAATAACCAGGGAGTGGATCATTCAAATTGATGCCATTTTATCCTGAGTAGAGTCTATATCTGATACTAGATCTACACTGGCAAAACTTGCCAGATCTTAGATGTTGGTGCAATATTGCAATGCCTTCTATACGGCTGTTGTAAAAAGTTTCGAGTTTCACCTTTTTTTTTTCTTTCCTTTTTTTTTTTTTTTTTTTGCTGCTGCCACCACTGAACATAAAATGGAAATGCGAAATCATGGAAATGTGAAGACTTGTTTCATTTTTGCGATTAAAATAGACAACTGAAAAAGACCTGATTTTAAAACTCCACGGCTTGAGGCATTTGAGTTTAAGAAACAGTCAGGTACAGAAGTAGTTTTGTTTTTTTTAAAGCAAAACATTGGGATTGGCTTTAGAAATAAGTGGTCCTCATTCTTGTCTTTTGCTGAAAAACACTGAGACAGGGTACCCCTATCAGGCTTTTACACTCCCGTGGTGGTTCTCTTTAATTGCTTAGATATGACTCCTGTTATGGAGAAGGCAATGGCACCCCACCCCAGTACTCTTGCCTGGAAAATTCCATGGATGGAGGAAACTGGTGGGCTACAGTCCATGGGGTCGCAAAGAGTCGGACACGAGTAAGCAATTTCACCTCACCTGTCATTTTAGTTTCTAAAAATTAAATTTGATATCTTGTTTCCCATGGTTATATAGGTAAAAGTCTTTTTATACATCTGAAAAATCATTTTTAATAATGGAAAACTAGGAATTAGGTGAGCCATTTGGTTCTTTTTCTAATGTATTAGTTGGTGTAGTGTTTTATATGTGTGCTATCTTACTTTAAAGAAAATAACAATGTCTTATTTTCCTCATTGTTGTCTTTTGCTGAAAAAGACTGAGACAGGGTACCCCTATCAGGCTTTTACACTCCCGTGGTGGTTCTCTTTAATTGCTTAGATATGACTTCGTAGCCCTAGTTAAAACCCACTCCAGTGTTCTTGCCTGGAAAATGCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGTAGCAGCAGCCCTAGTTAAAGTAAGATGGAACAAACAATTGAATATTCTTGGTCTTCATTGTAAAAGCACAAGGCCAAGATGAAAGTTCATGTTTTGGAAAATTTGTGAAATCTTAACTTGAACTAATTTTGGGTTCAGCTTCACACGTGAGTCATGTCTGACCTGATGTTAGCTGTAATCAGTTTTGAGCTTTAAGAATAGTTGTTATTGCTTGGGTTCTGAATGTATGAGAAAACTCTTCTGTTTATTTGTAGTTCTGACTTAGGTTATTTTAAATCCATGATTAACATACATTCCCTTTTAAAATTATGGTTTAATTGCTGAAAGAGATTTATTTTTGTTATACTAGACTATGGAAAATTTTTTCATAGAATTTTTTTCAAGTTTATTTTTTGTGTGCTTCATTTGGAACCATTTTTGTTTATATACATTGTATGTGCTCAAAATAGTTTTTTTTTAATTCAGTAAGATTTAAAACTACAGTGTAACACGTTGTGATCTTTGTGTATTTTCACTTTACATTTTAAATGCCAGACTTTACAAAAATAGCTGATCTTTATTAATTGCATCTTAATTAGAAACGTTTGTTCTCTTCCATGTCTTTGACCTTCTAAGTTTTTATTTTAGTCTGCTTAAAGAAAATCCTTGCACTACAACCTTTTCATAAAATTCAAGATTCTCACATTGAAGGTTTTGTATTGGAAGAAATACTACTGGTTTTTAAAAAGCAAGGCTTAATTAATAGAATTATTAGCATTTCTTGAGACAGCTTTCTGTGTCCTCACTACTCTGTGTGAGTGTTACTATAATTTGTGAAATACTGACTGAGCCCTTCACTTATCTTTTCTGAAGCAGCACCTTTGGACACCTCATTCTGGGAAGCCTGCTCGAGTTATAGTAAAGGACACACACATTTGTGTGGGGAGAAGTGGTAAAAAATGGAGAGTTGTGTCTTAATTACATGAAACTAAGCTTTAAAATATTTTATAACAAATTATTTGAGCTGCATAATCTAAACATGTCAAACGTTCAGTGGGACTATTTTTATATATGTATATGTGGTTGTAGGTCATAACATTTCAGTTTATAATATAAATTGTTATTTCAGTTTATAAGCTATCTCTCAGAAAAGACTAGCTCTTTTGAGAATACATAATTTAAAGTTTTAGAGTGAAGTAAAACACAACATAGATAATAGTAAAATTAGATATAAATGAGGGCTATATGGCAGTAAAACTGCTAGTGCCATTTTTCCTCTTTGCCTATTACACATTTTTTATTTTATTTTTTTTTGTACTCTGAACATTTTTAGGGATCATCTATCAGATTAGAGTTGGTTTGGGAATAAGTATCTTCTAAAAAGAGATTTATCTTAAAAATGAAAGTCCTGAAAAATTAGTTTATCAAGAGTTTATAAAGTCAAATATTCCATAGACATAGACTGGAATAGGTAAACTCATGAAAGTCGTATCCTTTCAGTATACCAGTATAACTTCAATATTACATGAGTAACACTGAGAGAATGCCATTAGATTTGTTCCCCCTTAATATTGGATTTTCGTTTTACATCTTTGGGAACAACTACATTAAGAACCTTATTAATCAGTATATCAGTAAGGATTAGGTGTTTGCTTTCCGAAAGAATGTTCCAGTGAGGTGATCAGAGAGGTTATTTTCTATCTAACTTGTTTATGCCCTGTACCTCTTGGGCATACTTTGTCTATAGAAGAAATATTTTGACCTTTAGGTACATTTTGGGCCAGTAGTCAAGTAATCCTAGGACTGATTTAAAAATCTTAGACTAATTTAAGGTTTGCCTTTTATACCTATTTTGAAAGCCTTTACATTTCTGTCAGGTAATTTTTCCCATGCCGTGAATATAATCTATTCAAAACATGTTTATGCTATCCATTCTGTTTTTAAATTGAAAAAAATGTTAAAAGTGTTTATGAAGAAAAGTTTAAATAAAATATTTTCAATCTTTAAAATATACTTCCATCTCTTATTATTTACTATCTTGATATAATCTATCACTTTCAAAGTCACTCATGACTTGATTAACAGTATACATTTTATATTCCTTCAACCTGCCAAGGAAGTGCCACAAAAATGTAATTTCTACTGATGCTTTCAGCCACAGATTGAAATGAGAGCATTTGAGTGAAATTATTTACACTTACATGCAATGGAAATTTTACAATGAAGCCAAGTAATTAAAGTTCCACTAGCAGAATTTTGCAGAATGGAAATAGAGAACTAATAAATAGCATTTATAAGCCCTCAAGC EMBV3_12679 CACCAAGGGTGTGTGCCTCAATGGTCGTAGGGTCCTATGTTCTTAGTTTTCTGGAGGCCT Gene GeneID:784897|LOC784897:XM_002693794:104_cdna Constitutive 0 NULL GeneID:784897 15 GENE LOC784897 NULL similar to Olfactory receptor 5B12 (Olfactory receptor OR11-241) EMBV3_02756 TGAATAAGATTTTCAGTGGTGTCTTTGTGAAGGTGAACGCATCAATGAGCTCATCCGGCA Variant GeneID:522029|RPL7L1:XM_002697242:430_cdna 384^720 5 EMBV3_36277 GeneID:522029 23 GENE RPL7L1 NULL ribosomal protein L7-like 1 EMBV3_43141 CATACTTGACTCCTTGTTCCAGAATCGGGAGTTGCCGGCGCCTGTGGTTCTCTTGCTCAC Gene BVV0102_424598 + 1 EMBV3_09276 GK000029.2:44679320-44691681 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00454 GTGGGTCAAATCACTGAGTAAGTTAGAGTACTGTATACCAATGATATGTGATGCTGCCCA Gene BVT0102_260252 - 1 EMBV3_01571 GK000020.2:18288971-18371754 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35438 ACAGAGCTGACCTTCAACTACAACCTCGACTGTCTGGGCAACGAGAAGACGGTGTGTCGC Gene GeneID:540769|WHSC1:XM_002688452:18_cdna Constitutive 0 NULL GeneID:540769 6 GENE WHSC1 NULL Wolf-Hirschhorn syndrome candidate 1 EMBV3_03137 CGTGACGACAAAGTTTTGCCATACGGGCACTGGTTCATTTTCTAATGGACTATGCTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29299 TCATCCACTTCGTGCCCAAAGAAAAGTTCATCCGGAGGACGGAGAGCACCCCACGGCCCA Gene GeneID:100299504|LOC100299504:XM_002696835:650_cdna Constitutive 0 NULL GeneID:100299504 21 GENE LOC100299504 NULL similar to hedgehog-interacting protein EMBV3_24464 ATGAAGAGATTAATCCCCAACTGAGCAAGGATCGTTGGAGACGAAGTTCAGCCCTTCTCG Variant GeneID:614192|C15H11orf74:NM_001034750:63_cdna 534^676 1 EMBV3_39592 GeneID:614192 15 GENE C15H11orf74 C11orf74 MGC128586 MGC157086 chromosome 11 open reading frame 74 ortholog EMBV3_28436 CAGACCACCTTCCTTTAAAATTGACCTCAGAGCCCTGTCGAAAAGTCAAGGAGTGCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12155 GCGTATGACAACTGTTACTAGAAGTACAGGCTGCTGGTTTTACCTAGATCATACATCTTA Gene GeneID:788176|MAMDC2:XM_002689639:4_cdna Constitutive 0 NULL GeneID:788176 8 GENE MAMDC2 NULL MAM domain containing 2 EMBV3_04134 GGACAGCTTAGGGTTACAGGGGATGGGGAAAGTGGGAGGAAGCAGGCTAGATTGAGAATT Gene BVV0101_010637 + 0 NULL GK000011.2:63591982-63637078 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032305 1 XLOC_018545 NonCoding TCONS_00032305 XLOC_018545 NonCoding NonCoding - 11:63595837-63596173 - TSS23304 336 0.958333333333333 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000223999382015663 0 0 0 0 0 0 0 0.000110426706198204 0.000136518519656892 0.0011974750254691 0 0 0 0.000142934032760461 0 0 NM_001192597.1 CUX2 Bos taurus cut-like homeobox 2 (CUX2), mRNA. 2e-42 176 73.11 0.964285714285714 0 noncoding 0 0 0 0 0.00300529204698996 0.9835740453283 0.014464965034163 0.778624152313727 ATCTTTTTTAAAAAAGATACAAGCGAACTTATTCACAAAACAGACTCACAGACTCTGAGGACAGCTTAGGGTTACAGGGGATGGGGAAAGTGGGAGGAAGCAGGCTAGATTGAGAATTTGAGATTGACAAATACATACTGCTATGTTTAAAATAGATAACCAACGAGGAACTACTGGATTGCACAGGGACGGCTGCTCAATATTCTGTATTAACCTAAATGGGAAAGCAATTTGAAATAGATAAGCTGTATATGTATAACTGAATTGCTTTATTGTATGTCTGAAACTAGTACAACACTGTTAATCAATTATACTCCAATATAAAATAAAAATTAA TCONS_00025166 TCONS_00025167 TCONS_00025169 TCONS_00025170 TCONS_00025171 TCONS_00025172 TCONS_00025173 . 3' 3291 TCONS_00025166 TCONS_00025167 TCONS_00025169 TCONS_00025170 TCONS_00025171 TCONS_00025172 TCONS_00025173 . 3' 3626 EMBV3_11043 GACCCAAGACAAAACTATGGAATCTTGGAACTTCACCCACAACTCACGCTCTCTGGCTCC Gene BVT0102_037586 + 0 NULL GK000011.2:95538848-95553069 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028878 TCONS_00028877 TCONS_00028876 TCONS_00028873 TCONS_00028879 TCONS_00028874 TCONS_00028875 TCONS_00028880 1 XLOC_015613 Coding TCONS_00028878 XLOC_015613 Coding Coding NR6A1 11:95546991-95741999 j TSS20211 7175 1 TCONS_00028878_4 376 0.0136585365853659 10 0.963257729209721 0.00200777723417688 0.00284918056677208 0.00370696471257333 0.000290780793090767 0 0.00144235845635965 0.000685893039795313 0.00223276015790538 0.00333983633927329 0.00152449633910142 0.000243754723550942 9.7294556119986e-05 0.000637774467623001 0.00159552648205252 0.00104296105099927 0.00451908716692701 0.000580783381496212 0.0013558664165843 0.00164070916570602 0.00762726188090873 0.0019032860519054 2.22112809853914e-07 0.000778017256636983 0.00159774286710105 0.00273333195470504 0.0035783269915278 0.00292207046563916 0.000662618103923799 0.000205322100860484 0.00107055002717752 XM_615322.6 NR6A1 PREDICTED: Bos taurus nuclear receptor subfamily 6, group A, member 1 (NR6A1), mRNA. 0.0 5833 100.00 0.450592334494774 NM_001489.4 NR6A1 Homo sapiens nuclear receptor subfamily 6, group A, member 1 (NR6A1), transcript variant 2, mRNA. 0.0 3608 84.39 0.456445993031359 TCONS_00028878_4 sp|Q15406|NR6A1_HUMAN NR6A1_HUMAN Nuclear receptor subfamily 6 group A member 1; 0.0 769 98.14 0.997340425531915 1 coding 0 0 0 0 -0.12362059120113 0.552961460005859 0.0550613084714449 0.47935596852497 GGCTTTTGTCAGGATGAATTGGCAGAGCTCGACTCAAGCACTAATGATCGCGCTGAACAACGAACCTGTCTCATTTGTGGGGACCGTGCCACAGGCTTACACTATGGAATCATCTCCTGTGAGGGCTGCAAAGGGTTTTTCAAGCGGAGCATTTGCAACAAGCGGGTATACCGGTGCAGTCGTGACAAGAACTGTGTCATGTCTCGGAAGCAGAGGAACAGGTGCCAGTACTGCCGCCTGCTCAAATGCCTCCAGATGGGGATGAACCGGAAAGCAATCAGAGAAGATGGCATGCCCGGAGGCCGGAATAAGAGCATTGGGCCAGTCCAGATATCAGAGGAAGAGATCGAAAGGATTATGTCTGGGCAAGAATTTGAGGAAGAGGCCAATCATTGGAGCAACCATGGTGACAGCGACCACAGTTCCCCTGGGAACAGGGCTTCAGAGAGCAACCAGCCCTCACCCGGCTCTACACTCTCCTCCAGGTCTGTGGAACTAAATGGATTCGTGGCATTCAGGGATCAGTACATGGGGATGTCTGTGCCTCCACACTATCAATATATACCGCACCTTTTTACCTATTCTGCCCACTCGCCACTTCTGCCCCCACAAGCTCGAAGCCTGGATCCCCAGTCATACAGTCTGATTCATCAGCTGGTGTCAGCCGAGGACCTGGAGCCATTGGGCACACCCATGTTGATTGAAGATGGATATGCTGTGACTCAAGCAGAGCTATTTGCCCTGCTTTGCCGCCTGGCTGACGAGCTGCTTTTTAGGCAGATTGCCTGGATCAAGAAACTGCCTTTCTTCTGCGAGCTCTCAATCAAGGATTACACGTGCCTCCTGAGCTCTACTTGGCAGGAATTAATCCTGCTCTCCTCCCTCACTGTTTACAGCAAGCAGATCTTCGGGGAGCTGGCTGATGTCACTGCTAAGTACTCACCCTCAGATGAAGAACTACACAGATTTAGTGATGAAGGGATGGAGGTGATTGAGCGGCTCATCTACCTGTATCACAAGTTCCATCAGCTAAAAGTGAGCAATGAGGAGTATGCTTGCATGAAAGCAATTAACTTCCTAAATCAAGATATCAGGGGTCTGACCAGTGCCTCTCAGCTGGAACAGTTGAACAAACGATATTGGTACATTTGCCAGGATTTCACTGAATATAAATATACACATCAGCCGAACCGTTTTCCTGACCTCATGATGTGCTTACCTGAGATTCGCTATATTGCAGGAAAGATGGTGAATGTTCCCCTGGAGCAGCTGCCCCTCCTCTTTAAGGTGGTGCTGCATTCCTGCAAGACAAGTGTGGGCAAGGAGTGACCTGTCCTCAGCACCCCTCCTCAGGCTAACCCTAACGCCTGGGGTGGGCAGGACAGGCTCCGGAAGAAAGAGCCAGAGAGACCAAGATGGAGGCTGTGGAGCAGCGTTGCCAGTTGCCTCCACAGCAAGAAGAGTTTTTGTTTGTTTGTCTTGTTTTTTAACCTCATTTTTCTATATATTTATTTCACGACAGAGTTGAATGTATGGCCTTCAACATGATGCACATGCTTTTGTGTGAATGCAGCCAATGCATTTCCTTGCAGTTTACAGAATGTGAAGATGTTTAATGTTACAGTGTTGTCATTGTTTAGAGATAGTTCTTTTGTATTTTGAGGGAGAGGGTGGGATGGGGCTGAGATGACTATTTCCATAATGTTGACAAAGATGACTACCTCAGTGGAAAGGGAAGGGTGTCAACAACCCTACTTTTTCCACACGTTCTCAGCAGACTCATATATTTGTCTGTCAGAGAGCAAATTGCCTTTTTCTAGCTACAGAATTACCAGGTAAAAGAGCACACCATAAAAGGGGAAGTGGTGTTAGGAGGTTTACTAAGCAGAGTGAGTGAGACATTGGGAACAGATCACGAGATGAGGAGTTAACCATCTCTTTTCTTTGGAAAGCATGGAAGTTGAGAGTTGGGCACAGTGACCAAATCTAAGTTAGGTGTCCACCCTCCAAGCAAGTCCTCAGGGAGAAGGGTTTCTATGCTCACATCACACTCTGGGGCCTCCGCTCCCCTCCATCCATACCACCAGTACTAATTTCTGCCGCTGTCACCTTTTCACCAAGGCAAAGCCCTGGTGATAAGCGATCCTTGGGACTAGCCTACAAGCTATCTTGGGACTCACAGCTACCTAGTTTGCTTACTCTCCTCACACTCATCGCCTCTCCCTTATAAACGTGACTTCCTATTGACCCTTTGAAAAAACAGCTGAACAAAATGTCATTCTAAATCCTGATGCCCACTACTGATTTATTCTGTTTTCACCTTCAGAGGTTAGTGGGACAAAAGCCAGACTGCTAACAGAATGAACACTCTTCCTTTGGAGGTCCCGTTTATCTCCCCACCCCGTCCCATCCCACCTCCAGATCTGAATCAGAAACTGCAATCTCTTTCTCAAACAGCTGGAAGGACCATTCACCCATCTCCTGACCAGAATTTTTACCCCTACATTCTACTCCAGGCTCTCCTAATGTCTCCCAAAATAAGATAAGGTTTCCTCAGAATAATAAGCCCAAGATCCAGCGTGGCTCAGCTGCCCCTTAGAGTATCCGTGGCCTGGCTGACCAAGGTCTGGAGGCCTAGAGTCCAAAGCTCCTGGAAGGGAAGGGGGGGCTTTAAACTACCTCATGTTCCTAAAGGCCTGGCTGCCCCCTCTGCAGGTGTGGCCTTGACCCCTTATTCTTTCACTACCTGCCCCACCTAGTCCCGGGAAACGTCCCTCACCCTCTTGGCTTTGGCCAGCAGCCGCACCAGGTCTGTCGTGGAATTCTTTCAGGCGCTTTTTCCTTCTCTGCCTTACTGCAGCAGTTGTCCCTGCCTAAACCCAGGTCCCTCCCACAGCCAGTGCAGCAGACAGGCCATTTAGCTGGTTACATCCCTGGGTAGGCTGAGGGGCCTACAGGACCTCTTTTTTTTGCCTGTTTAGTCAAAGGCCGTTTGCTCTCTTCCCAGCCCAACCTAGTACACTTACTCAGAGGGCCACCACACTGTGTGCATATCAGGTAGTCTGTGTCAGATTGTAATTTTTTCTTTCTGGTGAATTGTTACGGGTACAGAAAGTGAAGACTTTGTCCTTTGATGGATCTAAAACTCAGAGCATTTCTTCTGAATGTTGTTTCTCCAGTTGCTCTGAGAAAAGGAAAAAAAAAAAAGGAAAGGAGAGACATGTTCCTCAGGAAAAGCTCCAACCAGAATGTTTTTCACAAGTCAATGGGAAGATTTCAGATTCCACAGAACAAAGAGCCCATTCATTGCCGAGAGCCCTGCAGAATCTCTGAGCCAAGTGGCCATGTGTTCCGAGCCGGAGCCTGACCTGTGGACCGCCTTTAATGTCTTCTGCACCCAGTCCTTTTATGACGTGGGCTTTTTTTAAACAGGGTAAAGTGACTGTGTTGCGTCGCAAACTCAGGTATTATGAGAGGAAGGTAGGAGTGTAGCTAGCAGTGTGGAGACATTAGGTCAGCCACTAGATGTATTTGTGAATTCAGTTTGAAGGACACAGAGAAAGGTTGGAGGGGGAGGTTTGATGTGTTGTTTTTTGCCTTTCTTTCCATGATGTTTGGTTAACAGGTAGCCTTTTTGCTAGTGGAAAAGAAAAAAGTTGTGCATCTTGTCTGTAATTCCCCTCTCTTCTGTCCTCTCTCTGATCCCCTGCCACCAACAGCACTCACTTGGAGTGAGAACCTTTCCACCATAAAAATATGACCCTGAAAGCTGTGTGTTAAAGGAGAATCCCAATCATTGCACTGCATTGAAACATACAAGCTTTTCTCTTCCTTTCCCTTTGCATGTTTTCTTGACCCAAGACAAAACTATGGAATCTTGGAACTTCACCCACAACTCACGCTCTCTGGCTCCTTTGTTGGCTTTTGGAGTCTTTCACAGGCTTGGTGGTTTTACCCTCAGTCTGGAGAGACTCCCCAGAACCTGTCTCAAAGCACTCCACCTGTCTCAGAGGATACCCAATCCCCCAGGCCTGTTGCATAGTGAGGTGGGCAAACCTCCAGGGATGGAAAGCAGATCCAGAGGAGGAGGGGTAGAGGCACCTGAGGGGTCTCCATGGCATCATGACAGCCACCCACTTCACAGCACCCTGCCTCACACCTGCCACCTGTTGTCAGGGCACGGAGTCTTGCCATGGCCAGTATGTCACCAAGTCCTTAAAACCCTGGGCTTTCTGAGCTAGCTGCCTTGCTCTGCTGCCCATTTCTTACCTTAGTTTGTTTGTTCTCAGTTTACTGGGGAATGGGACAGATAGAGACAGACAAACCCAGTATTGGCAACATCTAGGCCATGTCCAAGGTTGGACAAAGTAAAAAGACTGGCCTCCCAGCAGGGCAGGAAGTTGAGCAGTGGTTCCAAGTCTTTAGCTCTGGGCCCCTGGTCTGTGTCTTCTTTTCTTGTTGCTTTTTAAAATTCTGCAATTGTTTTGAGAAATCCAATTTTTTAGACCAACCCTTTTATTAAACTTTAAATTTTTCTTTATTGATTTTTTAAAGTTAAAAAAAAATTTTTTAAAGGCAAAAAAAAACCCCCACTAAAACCCACCACTCTTACTTTCCCAACTTGATCCATGAGAGTCCCCCTGCACTCCCCTCTGCTTTTGCATCTGATCATTCCTCCCTTTTCCCTCAGCTTGATGCATCTATGTCCAGTGTCTGTGAAATGATGTTTTATCTGTGTCTCAGGATAAGAAACGGCAATCATTCCACCAGGTGCTGGAAAGTGGTTAGCCTTGAGGCAAGGGTTTCTAGGGCCACAGCTCAGGGATGTGTATTTAATTACAGGGTCCCCAGAAACCCATCTCCTGGCTACCACAAGCAACAGCTTCTTTTCTGGGCTTAGGAGCCAGACCTGGACTGTTTCCTCAGAGGCAGGGGCCCCACAGACCACGGTGGGGCTTCCTCTTTGACCAGAGCTGGGCTCCCTTGAGACTTGGGAAGACTTCAGTCTGTCCTGTAAGATGAACCACAGTGACCCTGCCTCTACTGGCTCACATGATGCCAGGTTCCTCTGCCTAATGCAGTACCCATCTGGCCTCCCTTCTCGGCCTGCAGCCCTCAATGGGCTACAGCCTGCTCAGGAATCAGTTGCAGGCTCAAAGGGAAGCCATGAATCAGGCAAGAGCTTGCTTTAAGCCCAAGAAAAAATTTGTCTTAACTGGTGGAGGCTAGTCTTCCAAGTCCTGGAGCCAGCCCTGCCAGCCAAAGGATCATTTTTGCCCTTTGGTGACCATTGTTTTCTTTCTCTGAAATGTCTTAGATGATAATGTTGTTGACTCAAATTTCCATGAAAAAAAAAAAAAAAAAACTACCTCTTGAGTGACATCCTGGTGTATTCCTCTCTGAGGAATCTTGTGGGAAAAGAATACTGTAGCTCCTGCTCTGTTTACATGTTTCTGTGGAGAAAGAAACCCTGCCTAGCCTGGAGTGTTGGGTGTTTTTGTCTGTGTTGCCATCCCAGGCCTGCGATAGGGGCTTGTGGCTACATTGTAATGTCTGGGCCATGTCTGGGGAGTCCTTCCCACCTGCCCAGCCAGGGACTAGCCATCCCCTTGAAGAGGCCTCCTTTTCCTCCCTATGATGCAAGGCACAGGGAGCACCACCTCCCATGACACCACCTTCAGGAGTTCCAATGGCACGTGCATCCATGAGCCTCCCCCTGGGCTACCTGCCCGAGGCCCACCTCTACCCACAGTCCTGTACAGGAGTCGAGTAAACAGGATGTCTCTGAGCCCTTGTCCCCAAAGGGCCGGCCAAGGGCTGCCCGCCAACCTGGCTCCATCAGTCCTGCATGATCAAGTGATAGTTGGCGGGCTCTGCTACCCAGGCCCTCTGCTACCTCCCACCCTGCCATCTGGCAAGGAATGGGCCCTTTTCTGTGAATTGACTACCTGTGGAAATGTGACCAATTAGTGTGAAATGCATGTTTAGCAAATGTTAGGTACTGTATTTGAACCAATAAATGTGAATCCTTCTGCACACGGCATCTTGTCTGTGAAGCATGTCTGGGATTCTGAGGCGGGACGATGGGTTGTTCTAAGGAGTGGGCTCTGCCTTCAGACCTGTGCTCAGCAATGTGTTGGGACTTTTCACAAACCTGAACCTCCTTGAACTTCAAGAATTACTACCTTTACTTTGTAAATGAAGAAATGAAAGTTAAATACTGATGAAGGGACACTAACCTGCCAGAAAGTGGCACAACTAGAGGAACTGAGTCTAATGGGAGGGGCAAACACACACACAGTGGGATCACGATTGAAACTCAGGATGTATTGATACATGCCGATGTGTATGGGCCGGTATGTCACTGTGGTCTAACCAGTTAATCCCTGTCTTTCCAGAAAATAGATGAAGTTTTCTAGAGTTGAGATGTATGGGCCGGTATGTCACTGTGGTCTAACCAGTTAATCCCTGTCTTTCCAGAAAATAGATGAAGTTTTCTAGAGTTGAGAAAATAGAGGCTCTGAAAAGTCTCTGGACTTAGGATGAGCTTCACAGATGAGTATTAAAGGCAGGCCTTGAAGAAAGTCACCAGACAGGAAGAGGGGGACAGACCAGGTAGAGTGGTCAACAACATGTTTGAAGGTCCAGCTGTGAGTCAGAAGCGTAAAAATACCCAGACATAACAACGGGCTGCCATGGCAGGAATGGGGGCAGGTGGGAGTTTTAGTGAGAGTTGAAGCTGGAGAAGCCCTTGGGAACCTTGAATGCCACATTGAAGAGTTAGAGGAAGGAAAGCCACCTGCTGCATCTCAGGAAAGAATTAAACCTCAGTGACCACATGTGCTGTTGAGTGACCTGCCTGTCTGTCACTCTAGTCCAACCATTTCATACTTGTTTTTCCAGAAAATAAATTTCCTAGAGCTGAGAAAACAGAAGCTCTGAGAGGTCAAGGTATGTGCCCAAAGTCACACACTAAATGTCAGGGTCCTGACTTGAACCTAAGATCTGCCCAACTGTCCTGTAATCCTGCAGTCCATACAGTCAGAGGAGTGGCAGTGTTTGGTTTGAGGGTTTTATGAAGACAGATGGGAGAGATGAAAGGTCTTCAGTTTGGAAAGATGAAGGCTAAGGAGTCTGGGCTTGGCCTGGTGCCTCAGTTGATAAAAGAATCCGCT EMBV3_41810 AGCCCAGAGAGATGGGTGAAATCCCAGGAGAAAGCACTCCGACAGAAAGCAGTACCGAAA Gene GeneID:519085|CLCC1:NM_001075784:116_cdna Constitutive 0 NULL GeneID:519085 3 GENE CLCC1 MGC138942 chloride channel CLIC-like 1 EMBV3_38105 TTCAAACCTGAAGGCACTGACTCTGGGTGCCCCAGGACCGTAATCTAAAGAACACCAGTA Gene BVT0102_156456 + 1 EMBV3_06018 GK000013.2:43240718-43244943 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25699 CCCATGGGGCCGTCCACAACACCACTGAAAATATTGTATCCACAGTGAATCTTGGTTGTA Gene GeneID:100337315|LOC100337315:XM_002690403:19_cdna Constitutive 0 NULL GeneID:100337315 9 GENE LOC100337315 NULL TATA box binding protein-like EMBV3_01930 GCGCGCATCCACAGGTTCAGTAACGGCGGCAAGGAAAAAAGGGTTGCCCATTATCCATAT Gene GeneID:327673|NDUFA1:NM_175794:14_cdna Constitutive 0 NULL GeneID:327673 X GENE NDUFA1 MWFE NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa EMBV3_34664 TGCTCAAATAAGTCACCACTGAATATATAACACCTAAGGCATTTGTAGAGATGAGCAAGG Gene BVV0102_433361 + 0 NULL GK000011.2:32280644-33444425 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25093 ATTTAATTTTTAAAATTTGATATGGAAATGTCTAATGTATAGTAATAATTTATGACAAAT Gene GeneID:508938|SMC5:XM_002689640:7_cdna Constitutive 2 NULL GeneID:508938 8 GENE SMC5 NULL structural maintenance of chromosomes 5 EMBV3_20453 GTACACGTAGACCGCATCACCATGAAAAGAGAGGTTATTGCTTGTTCTGATGGCTGCGCG Gene GeneID:337910|PAG16:NM_176625:137_cdna Constitutive 0 NULL GeneID:337910 29 GENE PAG16 NULL pregnancy-associated glycoprotein 16 EMBV3_33285 CTGGTCATGATGCTTCATCCAGGTCTCCCACTACTACCACATCTGTATCAGCAACAGCAG Gene GeneID:613439|ELF2:XM_002694343:87_cdna UTR3_Alt 2 NULL GeneID:613439 17 GENE ELF2 NULL E74-like factor 2 (ets domain transcription factor) EMBV3_03920 TCATCCCTTAAACTACAGCAAATGCTGCCGCATGATGCATTCAAACAGAAGTGAAATGTG Gene BVT0102_040299 + 0 NULL GK000004.2:432248-2628841 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41446 AGTTTTAGTTGGGACGTCAGCACAGGCGGGAATTGCTATAAAATCCAAGTTTCCTGGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32770 TTGGGGCCTCTAGGATTTGCCTTCAGCTTTCTCCCTATTGGACCAGAGACCTGCAGAGGA Gene GeneID:100296837|LOC100296837:XM_002689349:46_cdna Constitutive 0 NULL GeneID:100296837 7 GENE LOC100296837 NULL hypothetical protein LOC100296837 EMBV3_09737 TAACTACATAGACCTGGATTTGGTCAAGGACTTCAAACAGCGCCCTCAAGAGTGCCCACC Gene GeneID:538598|IRS1:XM_002685642:356_cdna Constitutive 0 NULL GeneID:538598 2 GENE IRS1 NULL insulin receptor substrate 1 EMBV3_18237 CAATCCCTTACTGTATCCCGTGGTCATGTCACAGAAGGTGTGCAGGTGGTTGGGAGTCAT Gene GeneID:100300545|LOC100300545:XM_002693735:474_cdna Constitutive 0 NULL GeneID:100300545 15 GENE LOC100300545 NULL similar to olfactory receptor 160 EMBV3_41231 ACTTGTCTGGATTCTTAACTAAATGTTGTCCCTGTTGCATTCGCAGCCCCCCAGTCCAGG Gene BVT0102_443775 + 0 NULL GK000005.2:110462554-110475769 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05958 TGGATGCCCATTCCCAGGTGTGCTCCATCCTCTGGTCTCCCCACTACAAGGAGCTTATCT Gene GeneID:515376|CDC20:NM_001082436:173_cdna Constitutive 0 NULL GeneID:515376 3 GENE CDC20 MGC140081 cell division cycle 20 homolog (S. cerevisiae) EMBV3_21028 GCGGTGGCTGGGTCCCCTCTTGGCAAACCTCTTAGCAGACGTGGTGGCGACCTCAATAAA Gene GeneID:511110|STMN3:NM_001083666:985_cdna Constitutive 2 NULL GeneID:511110 13 GENE STMN3 MGC151650 stathmin-like 3 EMBV3_13810 CTTCGTGCCGCGGAGAAAATGCAGAAGATTATATTGCAGCTTAAGGAAGTGCAGGTCTGC Gene GeneID:100337268|LOC100337268:XM_002695250:223_cdna Constitutive 0 NULL GeneID:100337268 18 GENE LOC100337268 NULL hypothetical protein LOC100337268 EMBV3_08440 ATGTCCTGCCAGCAGAACCAGCAGCAGTGCCAGCCTCCTCCCAAGTGCGTCCCCAAATGC Gene GeneID:786307|LCE1B:XM_002686028:199_cdna Constitutive 0 NULL GeneID:786307 3 GENE LCE1B NULL late cornified envelope 1B EMBV3_07995 TTCAGCTGCAGAATTCACGCCAGTGGCCATTTGGACTCTCATGGTCCTTGTCATTTGTGG Gene GeneID:281529|THBD:NM_001166522:5_cdna Constitutive 1 NULL GeneID:281529 13 GENE THBD NULL thrombomodulin EMBV3_16068 AAGGAAGCAGTGCTCTTTGAGCCAGGACATAAAAAATGCAAGGAAAACCAGTCTGCTCCA Variant GeneID:538949|ESCO2:NM_001101182:61_cdna 64^404 3 EMBV3_27060 GeneID:538949 8 GENE ESCO2 NULL establishment of cohesion 1 homolog 2 (S. cerevisiae) EMBV3_22138 CCAACCTCTCAGGTGCCTTGCATCAGGATGCTCGGACGACTGCCTTTTCCTGTATTTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32179 GACCTATTTCATTCACTCCCCAAATACTGCCATTGCTACTTTGCCAACCCCACACACCCC Gene GeneID:504411|LZTS2:NM_001098862:66_cdna Constitutive 0 NULL GeneID:504411 26 GENE LZTS2 LAPSER1 MGC157350 leucine zipper, putative tumor suppressor 2 EMBV3_03330 CCCTGGGTTCCACAGACACCTCACTGGTCATTCAGTCTGCTTCCACATCTTCTATTATCT Gene BVV0102_224818 - 1 EMBV3_06900 GK000019.2:14851131-14858563 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30356 CTACCTCGGGATGGCCTACACGGCAGTCCAGCACTTCGACCTCTTATACAAAACAGTTCA Gene GeneID:531802|NCLN:NM_001075955:20_cdna Constitutive 0 NULL GeneID:531802 7 GENE NCLN MGC138978 nicalin homolog (zebrafish) EMBV3_02667 CAGAGCTCGCACCTGATAGGGCACCAGAAAACGCACAGCAGGGTGAAATGCAAGAAGAAA Gene GeneID:534170|ZNF274:NM_001101153:55_cdna Constitutive 0 NULL GeneID:534170 18 GENE ZNF274 NULL zinc finger protein 274 EMBV3_06346 TACTAGATATGCTACTTCATAATCTTAGAACTTATTTCAACACTACAAGCTGTATGAGTT Variant GeneID:510670|C10orf107:NM_001105618:10_cdna 362^500 1 EMBV3_03833 GeneID:510670 28 GENE C10orf107 MGC140402 chromosome 10 open reading frame 107 EMBV3_23337 CCAACAAACTGGCGGAGAAGCGGAAAGCTCACGACGAGGCTGTGAGATCAGAGAAGAAGG Gene GeneID:511676|PES1:XM_002694637:17_cdna Constitutive 0 NULL GeneID:511676 17 GENE PES1 NULL pescadillo homolog 1, containing BRCT domain (zebrafish) EMBV3_41034 TTGTGAGTTGCGTAGTGTGGTAGAATTAAAGGTTGACGTGGCCCTGCTTCTGTCACCTCC Gene GeneID:616881|TSPAN3:NM_001035487:136_cdna Constitutive 0 NULL GeneID:616881 21 GENE TSPAN3 MGC127862 tetraspanin 3 EMBV3_18084 GCTCGCGACCTCGGTGGTTAAACTTGGAGAAAGGCCACAGAAGACACTTGTAAGCACACA Gene GeneID:617771|UBE2V1:NM_001035497:1327_cdna Constitutive 0 NULL GeneID:617771 13 GENE UBE2V1 MGC128136 ubiquitin-conjugating enzyme E2 variant 1 EMBV3_42735 GAGAGCGGAATCTTTATCCCGTGAATTCATTTAACTGCGGCAGTCATCCGCCGGTTCCTT Gene BVV0102_093070 + 0 NULL GK000010.2:70822595-70838967 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017762 TCONS_00017763 1 XLOC_009100 Coding TCONS_00017762 XLOC_009100 Coding Coding LOC100847401 10:70824013-70839959 = TSS12071 2076 1 TCONS_00017762_4 426 0.342003853564547 7 0.870241455001568 7.6824341247875e-05 5.64649623102448e-155 1.14929463620036e-146 1.94536799468085e-05 0 9.20778574974624e-195 0.00013469037121397 9.51279319884521e-06 1.39007126560434e-142 0.00037087713046836 6.39149024723869e-45 3.55568956902227e-05 6.1277105513127e-05 1.27521159838495e-60 2.58271945861502e-186 0.000596854803974957 1.58932721173167e-59 0.000705333725392899 1.26077428640327e-262 4.79243676466009e-321 0 8.5415663141961e-05 6.07372631392148e-05 8.40694164152377e-05 4.05403739198435e-05 1.28207492558432e-138 0 0.000229218371408986 0.000367369073786215 0.000509803495812208 XR_225964.1 LOC100847401 PREDICTED: Bos taurus uncharacterized LOC100847401 (LOC100847401), 2e-164 583 100.00 0.155105973025048 NR_045055.1 3110056K07Rik Mus musculus RIKEN cDNA 3110056K07 gene (3110056K07Rik), transcript 4e-48 197 80.17 0.109826589595376 0 noncoding 0 0 0 0 -0.663530969673908 0.144801881595575 -0.0341490227725638 0.478665301114581 ATGCTCAACTCAGTGCCCCCGGACGGGTTGCTCCGGAGAAGGGCAGAGCACCGTTTGGGCTTCTCCGGGCCCCTAGCAGGCGCGGTCGCCCAACCTTCTCTCGGCCGCCCCCCGGATACCCCGACTTCGGCCCGCGCCCCGCCTCCGCCGCTCGGCCCCCTCGGCCCGCCCCGGGCCCGCGGTGGCGGCAGCGGAGTGTCACGGCGCCATTGCTCTCCTTCCTCCGCTCTGCACCATGTCAGGAAGGAGAAGCGCTTCTTCACCCAATGGGGCAGGGGCCGTGGCCTTCAGCCTGGAGCCCAGAGCGGTACCAGCCACCAGCCCCTCGGGTCCTGCCACGGACTCCACCCGGGAGGACGCACCGCGGAGTTGGGGGCCGGCGCCCCTAATCAGTCCGCTTCTCGCCTCGCGGAAGCAAACTTAGCGGCGCGACCAGCCCCACAGCCATTTTCCCGGGGAACCTGGGGAAGCGGCCGAGGAGGTTGCTGCGGAGGCTGTTCTTGCAGTTGCTGCCGCTGCTCTACGACTTGCCCCTTCCCCGGTTCTCACCGCCCCGCTTGCCAAGCATCCCCCTCCCCACCTCCTAAGCTTCCAACTGCACCGGGACCCCGGGCAGTAGCGCCAGCTGCTAGTGCCGCTTCGTCCACTCAGTACCCTCGCTTCCCTTCTCCTCACCTACCAACTGTGAGTGAAGTGATCGCTTACTCGCTTCTACACGAACTCCTATTGGCTGCTCATGACGCCGAAGAGTTTCGGATTGGAGTTCGCTACCTGCCGTCCTCATTGGATGTAGCTCTGAAACTTCACGGATTGGTGCGAAAAACAGCAGCACTGATTGGTCAATTGAGGGGTCAGGAAGAGCAGTGCGGCACGAGGATTGGCGGTGGAGTGTCCCATGGAAACCGAACCCGGAGCTGCGGCCAGGACTTACACGGGGGCGGGGCAGGGTCTTTCCAAGGCGCCTGCGCTGAACCAGCTTCTCGGCGCCATTTTGTCTGGGCAGAGGTGGCCGCAGCTGTATCGCATTTTATGTTTCTGGCGAGAGGAGAGCGGAATCTTTATCCCGTGAATTCATTTAACTGCGGCAGTCATCCGCCGGTTCCTTCAGGACAGCACCTAGTGAAGGTCGGAAGAGTCCGGATCTCTCAGAAAGCAGTTAGTCTGAAGAAAACAGAACAGCTCAGTGACAGACATCTGCAAGTGTTCCTGAGAGGGAACCTCACTCTGGAAAAATGGAAAGGTGTTCCAGTTTTTAAAAGACCTGGATCTGCTATCTGTTGAAATTATATTTCTGATTCCCTTGTGAATGATAGAAATGAAAGTGAATGGATAGTCTTATCAGATAAGTGTATTTTGAGTCTAAATGTATTTGATTTTTTCCATAAGATGGCTCTAGTAGTAATCTTTATTTGAAACAATCTTATTACATTGTATCACAACAGCTGGTATATCAGCATGCACTTTAAAAAATGTTTAAAAAATGGGTGAATTTTTGTGTAGCTATTTTAATATTGAAGATGGAAGAAGAAAAACATTTTCAGTATATTGTGCCTTTTTATTTCAAGAAAGGTAAAAATGCTACTGAAACAAAGATTTGTGCAGTGTATGGAGATGGTGCTGTGACTGATCGAACATCTTGCAAGTGGTTTGCAAAGTTTCATACTGGAGATTTCTCACGGGATGATGCTCCCACTTAAACTAGCTAAAATTTGATGAAAAGTGTCTGTAATTAATCAATAGAAAAAGCATAGTCTTCCGTCAGGATAATACAAGACTGAATGTTTGATGACCAGGCAAAAACTGTCTTAGCTTGGCTGGTAAGTTGATTCATTTTCCATATTCTCCAGATAGTAAGCCTTCAGATTTATATTTAGTTTGGTCTTTAAAAAATTATCTTAATGGAAAAAATTTCAATTCCCTGGAAGACTGTAAAAGGCAAGTGAACAGTTCTTTGCTCAAAAAGATAAAAAGTTTTCGTAAGCTGGAATTAAAAAGTTGCCTAAAAAATGTCAGAAGATAGTGGAATAAAACAGTGACTACATTCTTCAATAAAGTTCTTGGTGAAAATGAAAAAAT EMBV3_13083 GCCCCTTCCTGCAGAAGCAACTCACTCAACCAGATCTCCGCGAGGAGCCGGTGCCCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08439 AGCTACACCCAAATGACAACTTTACACAAAAAAATGTGCATAGCACTCTAACCTTTGTCA Variant GeneID:504417|PBLD:NM_001045886:272_cdna 215^313 1 EMBV3_27550 GeneID:504417 28 GENE PBLD MGC128783 phenazine biosynthesis-like protein domain containing EMBV3_09912 CGCTTCTCCATCAACGGGCACTTTTACAACCACAAGACCTCCGTGTTCACTCCTGCCTAT Gene GeneID:510549|RASSF4:NM_001075454:14_cdna Constitutive 0 NULL GeneID:510549 28 GENE RASSF4 NULL Ras association (RalGDS/AF-6) domain family member 4 EMBV3_27855 GGACCCAAAGTTCGTGTCGGCGACAAAACACGAAATCGCCGATGCCTGTGACTTAACCAT Gene GeneID:408013|CACNA1D:XM_002697009:409_cdna Constitutive 0 NULL GeneID:408013 22 GENE CACNA1D NULL calcium channel, voltage-dependent, L type, alpha 1D subunit EMBV3_27186 GTGGAAGTCCGCTTTGTGAGCAGCGCCAAGCCTGTGACCACTGTCTTCGGGCACTGGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14963 CCAGCACAGAGATGCAGGGATTGGTGGGGGCGAAAGGTCTGGGGGTTGGCCATATTTGAA Gene GeneID:614912|KCTD17:NM_001105437:29_cdna Constitutive 1 NULL GeneID:614912 5 GENE KCTD17 NULL potassium channel tetramerisation domain containing 17 EMBV3_23629 TAAGATGAAGGATTCTCAGGGCCTGTGGAGAGCAGTGAAAATAAGTCTGTGTGCCTGGGG Gene GeneID:507580|COIL:NM_001038512:8_cdna Constitutive 0 NULL GeneID:507580 19 GENE COIL MGC134097 coilin EMBV3_12390 AAGCTCATAGACTTCTCACACAGGATAATGAGGGTGCTGGATCTTTACCCTGGACAGGGG Variant GeneID:521918|TADA1:NM_001101106:23_cdna 273^338 2 EMBV3_02732 GeneID:521918 3 GENE TADA1 TADA1L transcriptional adaptor 1 EMBV3_20428 AGCCGCACCACCCTGCAGGTCTTCGTCCAGGAGCCATTGTGGCCGTGTATGTCGTCTGCT Variant GeneID:539336|NTSR2:XM_002691479:362_cdna 634^883 1 EMBV3_34519 GeneID:539336 11 GENE NTSR2 NULL neurotensin receptor 2 EMBV3_38881 CATTATAGGGTCAAGATGAGCCAAACCCTGTGTGTACTCCTGGCAGTCAGCTCTGCCTTT Gene GeneID:527415|LOC527415:XM_002686524:714_cdna Constitutive 0 NULL GeneID:527415 3 GENE LOC527415 NULL similar to olfactory receptor 1340 EMBV3_11674 CCTCGTGGAAGGTTGAGAAGATGCGGAAGTACATGGAGACACTTCGGACACAGATTGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38807 GCAATCAGAGTAGGAGGAAAGAATGTATGTGCCTGATGGAGAAAGGGATCGGCATGCTGG Gene GeneID:282262|IGFBP4:NM_174557:33_cdna Constitutive 0 NULL GeneID:282262 19 GENE IGFBP4 NULL insulin-like growth factor binding protein 4 EMBV3_07873 GTTATTTCTGGAGAAGCCCTGGGAATCAAGGGTGGACAAGCTTCATTTATACCATATCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42720 GTTGACAAAAATTCAGCTCAGGGCAATGTGTATGTGAAGTGCCCATCAATTGCTGCAGCC Gene GeneID:508722|RBM39:XM_002692451:478_cdna UTR3_Alt 4 NULL GeneID:508722 13 GENE RBM39 NULL RNA binding motif protein 39 EMBV3_33044 ACATCCCGGCGATCTGCCCGAGTCACCCGCTCTTCTGAATCTGACATAGACATCTCCAGC Variant GeneID:508246|MYST2:NM_001076818:70_cdna 228^497 2 EMBV3_26661 GeneID:508246 19 GENE MYST2 MGC143325 MYST histone acetyltransferase 2 EMBV3_06607 GCATGTTACAGATAAAGCTACAGTCCCTTTTACCACCACCTTGAATCCCAACTTTCCACC Gene BVV0102_107738 + 1 EMBV3_24861 GK000013.2:65327797-65340131 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40719 GGGCTCGCTGGCCCGGGGCCACGTTGCTGACTTCCTGGTGGCTGACTTCAGGCAGCGGGG Variant GeneID:614868|KHK:NM_001076351:225_cdna 266^400 2 EMBV3_30979 GeneID:614868 11 GENE KHK MGC151915 ketohexokinase (fructokinase) EMBV3_34159 CCTATGATTGGCTTTGGGTGTGCAGGGGTTTCACATAGCTTTCCTCTCAGCCCAGTTGTC Gene GeneID:528033|CRLF3:XM_002695634:52_cdna Constitutive 0 NULL GeneID:528033 19 GENE CRLF3 NULL cytokine receptor-like factor 3 EMBV3_28715 TGTTGCTGAGGGCACAGGTCTTTTATTGGAGGAGGGGTATGGGTAGGGCATGAGGAAGAT Gene GeneID:614717|B3GNT9:NM_001076342:421_cdna Constitutive 0 NULL GeneID:614717 18 GENE B3GNT9 NULL UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 EMBV3_17131 CCCGTCAAGACAGGACGACATTTTACAGGCCTATTTCAACAAATGGAGATTTTGTCATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04725 ATAGTATTCTGAAGTGCTAACCTTGGTGGTTGGGAGAAGGCAATGGCACCCCACTCCAGT Gene BVT0102_030803 - 1 EMBV3_40137 GK000002.2:124949962-124956593 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07966 TACAGGCTGAGATCAAGAAATCCTGGAGCCGCTGGACACTGGCACTGGACTTCAAGCGCA Gene GeneID:507783|PTH1R:NM_001075332:98_cdna Constitutive 0 NULL GeneID:507783 22 GENE PTH1R MGC138946 PTHR1 parathyroid hormone 1 receptor EMBV3_15282 GATTTGGGATTTCTCCAGTTCCATCAAAAGTCGGAGGATGACGAAAAGCTGAAAAAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02587 CGCTGTTCAACGCACAGTTTGGGAGCATCTTCCGCACCTTCCACAACCCCACCTACTTCT Gene GeneID:514296|LOC514296:XR_084642:441_cdna Constitutive 0 NULL GeneID:514296 22 PSEUDO LOC514296 NULL similar to 5-nucleotidase domain containing 2 EMBV3_05098 GCCACTTGATCTTACTACAGGAATTGGTATATGAGTACAGGCCAAATGTAATCTCTCATC Gene BVT0102_026032 - 1 EMBV3_17876 GK000019.2:12231485-12536190 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095182 1 XLOC_057658 Coding TCONS_00095182 XLOC_057658 Coding Coding BCAS3 19:12382827-12588695 j TSS71038 1696 1 TCONS_00095182_3 338 13 0.991824818936498 0.000194425573506894 0.000244267350700003 0.000208182076051617 0.000546773356809875 0.00028182325138484 7.20851620717058e-298 0.000389557909789519 0.0012844392025876 0.000347941816351734 0.000594914717896298 0.000414499070996167 2.15498596575035e-05 1.65588695188506e-05 0.000596445030952341 0 0.000292051784428874 0.001221738183904 0.00805351456918477 0.000954832249616656 4.31294311286053e-05 0.00044514809690316 0.00291833263649474 0.000438215814041442 0.00105398873717327 0.000167232585758678 0.000384018805506215 0.000527032908537783 0.000173542447731707 0.000369593057452338 0.000256330945586714 XM_599680.7 BCAS3 PREDICTED: Bos taurus breast carcinoma amplified sequence 3 (BCAS3), mRNA. 0.0 1802 100.00 0.588443396226415 XM_005257472.1 BCAS3 PREDICTED: Homo sapiens breast carcinoma amplified sequence 3 (BCAS3), transcript variant X1, mRNA. 0.0 1514 93.59 0.588443396226415 TCONS_00095182_3 sp|Q9H6U6|BCAS3_HUMAN BCAS3_HUMAN Breast carcinoma-amplified sequence 3; 0.0 678 99.08 0.964497041420118 0 coding GTAAACACACCCGTCTCGGTGTCGAGTCTGACTGCTAGCCTGCGACGCCCGAGTAAGAGGTTTTCTGAATGAAGAAATGGCTACAGACTCCCCCAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCTCAGGCCGTCACGGAGCAGTCCTACATGGAAAGTGTCGTGACTTTTCTGCAAGATGTTGTGCCTCAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCAAGGAATCTGGAATTTCATGAAATTCATAGCACAGGGAATGAGCCGCCTTTGCTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTATCAGTGGGGAAGCACAGGAGCTTTTTTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATCTTGCCTGCTCCACAGTTTGGTGCTCAAAAGTGTGACAACTTTGCTGAAAAAAGGCCCCTCCTTGGTGTTTGTAAGAGCACTGGATCTTCTGGCACAAGTCCACCTTACTGTTGTGTGGATTTATATTCACTTCGTACTGGGGAGATGGTCAAGTCCATTCAGTTTAAAACGCCTATCTATGATCTCCATTGCAACAAAAGGATCCTTGTTGTAGTATTGCAGGAGAAAATTGCTGCCTTTGATAGCTGTACTTTCACGAAAAAATTTTTTGTCACAAGCTGCTACCCTTGTCCTGGACCCAACATGAATCCTGTTGCTCTTGGGAGTCGCTGGCTTGCTTATGCAGAAAACAAGTTGATTCGATGTCATCAGTCCCGTGGTGGAGCCTGTGGAGACAACATTCAGTCTTACACCGCCACAGTCATTAGTGCTGCTAAAACACTGAAAACTGGCTTGACAATGGTTGGGAAAGTGGTGACCCAGCTGACGGGCACGCTCCCTTCAGGTGTGACGGAAGATGATGTTGCCATCCATAGTAATTCACGGCGGAGTCCTCTGGTCCCAGGAATCATCACAGTAATTGACACTGAAACAGTTGGAGAGGGCCAGAAATCTGCTTCCAGTATATATGGTTCTGCATCTTGATGAGAGATTACATTTGGCCTGTACTCATATACTAATTCCTGTAGTAAGATCAAGTGGCGTTTCAAAAAAATACAGACTGTGCTGCAGTGAAAAGAAAAAAATCTTTAAAATTCTGGCTATTATTGAATTTGGCTATTATATTTTATTTGAAATATGAATAATATAATTCTCTGCCTTTCCCATCTTAACTTTGTGGTTAACCAGATATGTTACAGGCTTGTATTCCTGTTTAAAAATCTTTTTAATGAAGTGCTAGCAAACTTTTCAGTTGACTGTAATGACTTTTTTTTTTAACGTTGTGTTAATTAGCTCGAGTTGACAGACACATACAGATGTTCTCTTTTTAAATTGGAATTAAATATTTAAACGCTTAGTGTTTTATGAGTGTTAACAAATATTTTCTTTTGTCCTTTGATTCTTAATTAATTCACCTCCAAGGCCACCCACATTTACTAAGTAGTAACAACCCTCCTCAATATTGTCTAGTTTGGCGGGTATACCTAAGTATGTTAAACATCTAGCATTTGTTGACAGACTGATGTGTGGTGATTTAAAAGTTGAAACTGTTATCTCCTATTATTTTTGATGAAATAGAGCTATAAC EMBV3_05651 TCCCACTGTGATTTGGGGGCCATTCTGAGGAGTCCGTTTCCTCACCTGCAAAATGGGATA Gene BVV0101_052657 + 0 NULL GK000019.2:40762635-40778734 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34530 CAGACACGGAAAAGTTGATTCGCGAGAAAGACGAAGAGCTTCGCCGCATGCAAGAGATGT Gene GeneID:512478|SEPT1:NM_001098947:302_cdna Constitutive 1 NULL GeneID:512478 25 GENE SEPT1 MGC148435 Septin-1 septin 1 EMBV3_22158 GAGTGTGGCCTTTGTGCTTTTTTCTGTCTATGCTGCCACGTTAGCAGTAACCCTACAGCT Gene GeneID:281564|UGDH:NM_174211:5_cdna UTR3_Alt 2 NULL GeneID:281564 6 GENE UGDH NULL UDP-glucose dehydrogenase EMBV3_11537 AGACAAAGGGGCCACCTACACCCCACAGGCACCCAAGAAGTTGACCGCCACAGAAAAAAG Gene GeneID:788251|PLEKHO1:NM_001083797:187_cdna Constitutive 0 NULL GeneID:788251 3 GENE PLEKHO1 MGC151785 pleckstrin homology domain containing, family O member 1 EMBV3_08099 CTAGGCCACCAGCCCGCGGGTTCAGGGAAGGATGTTCTGTTGCTCAGTCAGTTCATCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18955 TCCCTCTCCAGTGGACCATATTTTGTCAGAACTCTCCACCATGACCCATCTGTGTTGGGT Gene BVV0102_154185 - 1 EMBV3_04814 GK000008.2:60823631-60849477 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04708 GCAGGGCCTTCCTGGAGAAGGTGCGCTGACCGGCGGTGAGCTGCCAGGCGCGCACTCTCA Variant GeneID:280977|ACP1:NM_173978:8_cdna 481^869 5 EMBV3_00652 GeneID:280977 Un GENE ACP1 MGC128334 acid phosphatase 1, soluble EMBV3_39280 TCTTTTGTAAAGTAGGAGCTGGGGTGTGGTGGGAACTGGCTGCAAAATTCTGGCCTCTTC Gene GeneID:505619|KAT5:XM_002699347:228_cdna Constitutive 2 NULL GeneID:505619 29 GENE KAT5 HTATIP K(lysine) acetyltransferase 5 EMBV3_20552 GGCTTGTACTTCTGTGGGAAGATTGAGATCAACCACTTCTACTGTGCAGACCCACCTCTC Gene GeneID:513633|OR5M3:XM_002693750:514_cdna Constitutive 0 NULL GeneID:513633 15 GENE OR5M3 NULL olfactory receptor, family 5, subfamily M, member 3 EMBV3_39608 TATATTTGGCATACTTTGTGCATGCAGCAGGACATTTGGGCTTCCAGGACAGTTTCGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18913 TCCCAGCATCAGGGTCTTTTCCAATGAGTCAGCTCTTTGCATCAGGTGGCCAACGTATAG Gene GeneID:100336969|LOC100336969:XM_002699819:52_cdna Constitutive 0 NULL GeneID:100336969 X GENE LOC100336969 NULL alpha-galactosidase A-like EMBV3_14326 GAATTTCATCAGCCAAGGGGAAGTACAAAGCCTTTTCCACTTGTGGGTCTCACCTCTCGG Gene GeneID:532476|LOC532476:XM_002688606:372_cdna Constitutive 0 NULL GeneID:532476 7 GENE LOC532476 NULL similar to olfactory receptor, family 7, subfamily C, member 2 EMBV3_09182 AGTCCCATGGAGTTGCTCTTGGAGACAGACGAGTTCAGCCTTCAGAGTTGTCCTCATCAG Gene BVT0102_076898 - 0 NULL GK000021.2:42719202-42937759 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34230 GAATTAATACTCTGGAGGAGCAGCTGGGGTCACTAACCTCCATTGTGGACACCCATCAGA Gene GeneID:505627|GRAMD3:NM_001079579:28_cdna Constitutive 0 NULL GeneID:505627 7 GENE GRAMD3 NULL GRAM domain containing 3 EMBV3_43383 CGCGTGCTCTCTCATTTCCTCAGCAGCCAGCTACGGGGACCGCCACTGCATCTCGGTGGT Variant GeneID:539545|LLGL2:NM_001099098:11_cdna 714^943 1 EMBV3_20902 GeneID:539545 19 GENE LLGL2 MGC155119 lethal giant larvae homolog 2 (Drosophila) EMBV3_22853 GTGAATTCAGAACCACAACTGTCAACGTAGTTGGAGCACCACCAACAGATGCCCCTGATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16989 ATCAAGCCCCCACCGCCTGAGGTTGTAAGCAGGGGTTCCAGCTAATAGGAATTTCTGAAT Gene GeneID:531673|CASC3:NM_001098069:154_cdna UTR3_Alt 2 NULL GeneID:531673 19 GENE CASC3 NULL cancer susceptibility candidate 3 EMBV3_10255 TCATTAAGGAGTATTACCTTGACATCACTGGGTACAGGGCACGTCGATCCACTCCAGTCC Gene GeneID:281554|TSPY:XM_002683678:7_cdna Constitutive 0 NULL GeneID:281554 8 GENE TSPY TSPY-M1 testis-specific protein, Y-encoded EMBV3_41027 TTTCCTCGAGCAATACCCACAAAAATGGAGGGTTCCCCCGCATCTTCCTGAGGCTCCTGA Variant GeneID:282468|SLCO2A1:NM_174829:13_cdna 862^940 1 EMBV3_11655 GeneID:282468 1 GENE SLCO2A1 SLC21A2 solute carrier organic anion transporter family, member 2A1 EMBV3_04408 TTCCTGCAGCCATTCCGAGTGGGTCATAAACCCAGCTGTACTTCATTTTGAGAGCTTGTT Gene GeneID:511548|ABCB8:NM_001075526:634_cdna Constitutive 0 NULL GeneID:511548 4 GENE ABCB8 NULL ATP-binding cassette, sub-family B (MDR/TAP), member 8 EMBV3_23552 AGCAGAATCTGGATCAAACTTTAGTGTTGGACAGAGACAACTGGTGTGCCTTGCCAGGGC Gene GeneID:515333|ABCC4:XM_002691921:54_cdna Constitutive 0 NULL GeneID:515333 12 GENE ABCC4 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 4 EMBV3_17303 AGCAAGAGGGGCACTTTCAGTCCCTCTTCTGATGCCTATGACAGAAGCTTTCTCTATGCC Gene BVT0102_004766 + 0 NULL GK000010.2:74749189-75235433 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017840 TCONS_00017839 1 XLOC_009128 NonCoding TCONS_00017840 XLOC_009128 NonCoding NonCoding - 10:74978826-75008470 - TSS12115 584 1 TCONS_00017840_1 79 0.794520547945205 3 0.980400094457376 0.0098560639619172 0.00372755535693606 0.0057364550059848 0.00704665235633786 0.00571781997925811 0.00361299910270182 0.00375014118433889 0.00553447513622226 0.0122371761625556 0.000140284686304113 0.00011455723848076 0.00133539501174407 0.00120522109937575 0.00307154273324672 0.00219466130088243 0 0 0 0.0043345578564284 0.00278048873354424 0.00276758624005272 0 0 0 0.000447546616902975 0.00168394726639853 0.00221330702754303 0.000164471351333695 1.44371132834358e-05 2.0589247079113e-05 NM_001083717.1 CBR4 Bos taurus carbonyl reductase 4 (CBR4), mRNA. 6e-52 208 81.74 0.373287671232877 0 noncoding GAGCATGTGAAACTCTCGGCCTCAACACTTGACCCAAGTAAAACCAATAAACATGGAACCCAGGCCCAAACCCTCTGTCCGTCTCTGCTTCAGTCTTGCTGTGTGGCCCCAGGAAAACTGTGCAGGTCCCAGGACTTGTAGAACTACACAGAGAACTGAGGCTGTAGTCAGAGAAAAGAGATTCAAGATGGAAGGTGTCTGGCTGCCTCAATCATCACATGGGAAAAAGCAGGCCATGACTACACTGAGCCATTATGAGCTGATGATTATACAACAAAACAACTCAGCTTAAACTCTGCACTAAGGATTATGTACCAACAATGTATCCTGCTTGAGGACAATTTCTCCTTGAAAATCTTCTAACTAATCCTATTATCTTAGAATTTAAATTGTGAGGGTGGGTCTGGTAAGATCTTTACAAACTTGAGACATGCTTTTGATTTATTGTTATAACCAACTGAAAAAGTATATAGCTCCCTTGCTAAGACTAGCAAGAGGGGCACTTTCAGTCCCTCTTCTGATGCCTATGGCAGAAGCTTTCTCTATGCCTTTTATGCTTTAATAAAACTCTGCTACAAAAAAAA TCONS_00017853 TCONS_00017854 TCONS_00017855 TCONS_00017856 TCONS_00017857 s 3' 256280 TCONS_00017853 TCONS_00017854 TCONS_00017855 TCONS_00017856 TCONS_00017857 s 3' 226964 EMBV3_40148 GAAGTGTTGGTCAAGGTCAACGCGGCGGGCCTGAACCCCAGCGACGTCAAAAACGTGCTT Gene GeneID:100299935|LOC100299935:XM_002683916:2_cdna Constitutive 0 NULL GeneID:100299935 Un GENE LOC100299935 NULL hypothetical LOC100299935 EMBV3_13535 CCAGCGTTGAATTCTGAGGCAGATGCTCTTGGGTCTGCGGGAGCTTCTTGTAGCAGTACT Gene GeneID:519724|CAB39L:XM_002691786:399_cdna UTR3_Alt 5 NULL GeneID:519724 12 GENE CAB39L NULL calcium binding protein 39-like EMBV3_09981 TGGAAGGAAGTTGTCATGCTGGGGGTGGATGCCCTTGAAATAATGCAAAATCAGTAATGG Gene BVT0102_282990 + 0 NULL GK000018.2:60870833-60891835 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091597 1 XLOC_056371 NonCoding TCONS_00091597 XLOC_056371 NonCoding NonCoding - 18:60880235-60882968 - TSS68943 2733 5 TCONS_00091597_4 55 0.178558360775704 1 0 0 0 0 0 0 0 0 0 0 0.000117151758056085 1.79197396950433e-06 5.12430718582919e-06 4.97811209845313e-05 2.0128246799323e-05 3.2911467640862e-06 0.00121718673807911 0.000619926665901621 0.0010825577678188 0 1.18409913071823e-06 0 0.00149328424900606 2.34173588560905e-05 0.00057218619007165 0 0 7.14618068126918e-07 0.000164091210526429 4.37856026131779e-05 0.000146328486667053 XR_229235.1 LOC101905472 PREDICTED: Bos taurus uncharacterized LOC101905472 (LOC101905472), 1e-68 266 84.46 0.0889132821075741 0 noncoding 0 0 0 0 -0.00983763902114256 0.939547216066802 0.0125281181955004 0.83061414824004 AAGTTCTGATTTGCCCAAGGCTGAGTCAGGTCTAAGGCAAAGTGGACAGTGTATTTCAAGGACACGGAAAGGCCTAACTTCAAGCTTTGCCCTAGGTAGGACTTTTAACAAGCTAGTTGTTTTTAAATGCATATGCAAAAAGAGCCAGCTTTTCAGTTTCCAAGGGAAAGGAAATTTCATTTTAACCAGTTTTCTCCAGAGTCTAAAGAATATCACGGCCATCCTGTGTCAAAAAGTCATCTTTCCTTTCTGTAGTCTTAGTTTTATAGCTAAAATATAGACCAACTAATGCTCAAATTGACTCGGATCTTTCAGCTGATAAAAATTTTGGACTGCCCTTCTGGTGGGAAGTGATGTCTTTGGCCCATTAGAAGAATCTGAAGGGTTAAGGGAATTTGCAGGAGTGGGGGAAGCTTGGTTCTTTCCAGGCCTGAGAAACAGGAGTAGTCAGAAGGGAATTTTTTAGGATGTTCAGGAGTGGGGGAAGCTTGGTTCCCTCTCCACCTGAGAGATCAGCTTCCTTAGAAGGGGATTCTTCAGAATGTTAGGACAGTTTTTGATCCTTCAGGCTTTGGAATATAGAAGAAAGAGCTGGACCAAAGGGAACCTCAGAATGCTTTCCTAGAGATCCTGTGGATATGAAAGGCCGAGTAGGGGTCATCTAGGAAATCTGATGGAGAGACACAGAGAGGGACAGGAGACAGGGAGTCAATAGAACGGAAGGAAATTCTGAGTCTTTCTCATCTTTGGCAAAACCTAGTGTGCCACTCAGAGGCCATTTCTGGGGCTCCCCCATTTGTATTGGAGCCAGGCCTTTTGGAGGGTCAAACTTTTCCAGTTTCTGACAATGTAGCCAAGGGTTGAGAATGAGAGAGCCTCCTGGGATATAACAGAAACCACTCTTAGCCTATCTACCATAGAATGGGAGTACTGAGAGTCACTGGCTGACAGAAAGGCGTCCCTTTTTCCCCAGTGGTCTCTCCGAGTGACTAATGGCACAGAACGGCCGATTGACCCAACAGTCGTGTGCCACAGTGTGAGGTGACCGCTGAGAACCCTGAAGCTAAGTCATCAGGTGACAGGGGCAGAGATAGACAGAGATTCCCTGCAGCAACCAGGTGACTCACCATTTGGTGATTCCCTCAAAAGAGAAGGCACTCTTGGGATGGCTCAGAGGCAACACCCAGGCTCCTGTAAATCAGCCCGGGAAAAAGGGAAAGAAGTGAAAGCGACAGGGAAGAAGGCTGAGGAATCCGCTGTACAATATATCCGGGAGGCGGTGGCCAGGTGAAAATGGTCTCTGTTTGGCCTCAACCACTATGTTCCTGACACGGTGGAAGGAAGTTGTCATGCTGGGGGTGGATGCCCTTGAAATAATGCAAAATCAGTAATGGTGTTCTTACACCTTTTGGCACATATTTTATCAAACAGCCATTGAATAGCAGAGCTTAAACTTTACTTCAGTTTATTTACATTAGATTTTAACTAATAAAATTTTAACTAATGACAGATTCACAGAGACAGCTCTAAGAAAAGGTGAGAGAAGTTTTTGTAACTGTAAAGAATACTAAAGACAAGAAAAGTTTCATTCACTCAGTCATGTCCAATTCTTGTGACCCCATAGATTCTAACTTGCCAGGTTCATTTGTCCAAGAAATTCCCAAACAGGAATACTGGACTGGGTAGTCATTGCCTTCCACAGAGTTCTTCAAAAAAAACTAACCAAAAAAAAAAAAAAGAAGAAGAAAAGAAAATTGATCAAGTCATGCTAATATTTTCATACATACAGTCCAGTTCAGTTCAGTCGCTCAATCGTGTCCACCTCTTTGGGATCCCATGGATCCCGGGGCTTCCTGTCAGTCACCAACTCCCGGAGCCTAGTCAAACTCATCTCCACTGAGTACAGACATACACTCAAATAGGGCTATATACTCATTAGGAGGAAGAGAGAAAAAGTTTCCTGTCACTAAACTCAGGTAATTATGAATGGATTAAAAATGTGCTGTAGTTTTAATACATTTTAAAATACAGCAATGAGCTGTATTTTAAATTTTAATACAGTTGAGCATAGATTAGGACTAATAAGATTCTTGTGAACATTTTGGAAAATACAAAGCTGTGATGAGACTCTGTGATGTGAGCATGGAGTGTACTGGAAAAGATCAGGCCTGGGCTTGGGATGAAAACCGCCACTCCTCAAACCCAGTATCTCTGCTAAACACAGGTGAGTGTTCAAGTCAACTGGAGAAAAACAAATTCATAGCATGGGAATCTCACAGAAACACCTAAACCATTGAACATGTCATGGAGTAAGAAGTACATGGAGGAATGCATTATCATTGCATGGGTATTTTGGCACTATTATGGAAACTATGATCTCAATCTATCATTAAAAAATATTAGTTTGGGCACTTCGTGATGATCCAGTGACTAAGACTCTGAGATCCCTATGCACAGCGCTCTGGTTCTTTCCTGATCAGGAAACTGGAACCCACATATTGTAGCTGAGTTTACATGTCAGAATCAAAGAAGCTGAAAATTACGATACTGAAGATCCTACCTCCCACAACGAAGACCCAGTGCAGCCATATAAATAAATACATTTAAAATGTGTCATAAGCAGATTTCACTTCATATATGCCTTTCCCGATCTGTGGCTTAATTTTGGAAGGACTGATGCTAAAGCTGAAACTCCAATACTCTGGCCACCGCATGTGAAGAGTTGACTCATTG TCONS_00087432 . 3' 5451 TCONS_00087432 . 3' 8183 EMBV3_36950 CTGACCTCCAACAAGCATTCATCCACTCAACCCCTTGGAGCCCACCATAGCCTCATAGAA Gene GeneID:100300995|LOC100300995:XM_002686372:163_cdna Constitutive 0 NULL GeneID:100300995 3 GENE LOC100300995 NULL similar to cytochrome c oxidase subunit III EMBV3_19758 TGGGAGACAGATGGGCTTCTTCACACCAGGGAGTTGTAGATTGTCAGAGTGAACAAGTTC Gene BVV0102_404122 + 1 EMBV3_32592 GK000007.2:59075335-59136027 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16094 TTCCTCTTCATCAACAAGAAGCTGAGTTTCGAGACCGCAGGAGGCCTTCCATGCCTGGAG Gene BVV0102_351223 + 0 NULL GK000010.2:74178131-74384704 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014748 TCONS_00017830 TCONS_00014746 TCONS_00014747 TCONS_00014749 TCONS_00014745 TCONS_00014744 2 XLOC_008351 XLOC_009125 Coding TCONS_00017830 XLOC_009125 NonCoding NonCoding - 10:74356073-74358836 - TSS12112 1603 2 TCONS_00017830_2 65 0.0218340611353712 3 0.42070963070239 0.000568952480261405 0.000253191906466127 0.00058993253363508 0.000107120476759689 0.00126822639220469 5.79609603279324e-05 0.00014615841918819 0.000313807702682047 0.000290270886459074 0 0 0 5.05064341743159e-06 0.000493991297232257 0.000317184580935928 0 1.91445503601869e-16 0 0.000229103764235172 0.000460275445665631 7.96028522278718e-05 0 0 0 0.00014627247634195 2.36877168923785e-05 0.000578457018539183 0 3.02844944912381e-06 0 XR_229658.1 LOC101904355 PREDICTED: Bos taurus uncharacterized LOC101904355 (LOC101904355), 2e-06 59.0 100.00 0.0193387398627573 XM_005268123.1 SYT16 PREDICTED: Homo sapiens synaptotagmin XVI (SYT16), transcript 2e-51 208 87.50 0.104179663131628 0 noncoding AAGCACTCAACTAAGCTAACCCCATATTCATCAACTTTGAAAACTGTGTATTCTTTACCATCTGAGCCATCAGGGAAGCCCCATATTCATCAATTTGAAACTCATTAATCAGAGGGAAACTCAACACAGACATCTAAAAAGCTAAGAAGACGGGAAGCGGTGGTCAGCCTTTTCCCATCTGCTCTTTGGACCCTAAAGAGAGCATTACTTTCCTAAAGCTAATGTATTCTTTGGTAATGTCCATTCATCATGCCACCACAGCAGCTGCTAAACTGCTCATGTGTGATTTCTTAATGGGGTCCATCCAGGAACAGTGACATTCCTTCCCTGACCAAAACCACAGCCAATGCCAAGCTCAGGAGACTGCGAAGCATAATGCTTACCTGGCCCTTCGCAGATTCCAGTCTTGTCTTTAGAGTGCTTTCTCTTCCCGCGTTGCTCCAGGCATGGAAGGCCTCCTGTGGTCTCGAAACTCAGCTTCTTGTTGATGAAGAGGAAGAGGACAACCAGAAGAACAAGAAAGACCCCAGCTGCAGACAAGAAGCCGATGGCCTCGGGAGGGACTAGCAAGAGAACACAAAGGAAAAAATATCACCAAGTGAACCACCTTTTAGTTCTAACAACTGATCAAAGTTATCTGGAATCTTCACAATTATTAGAATGCCAGATACTCTACAAGTCCTGACCTGCTGGCATCCCAGAACTGTGTACAGGGGAAAGGAAAAGGACTATTGCCAGGTGCATCAAGCTAGGCTGGTTCCTAGATGACAGACCTCCATTCCTTCACACATGTGGCTTCTTCTGCCTATAATATAACTCCTCTAGCCCCTATCCTTTGCTTAATATTCAACATCAAGCATGCAAGCTATTAGATATCAGTCAAATGGGTTGAGCTTGAAATGGCTGACCAGTGTTATAAAAGCAAGTCTTTTAAAAATACAACTGCCTAAAACTTAGAAAAACTAATTACACAAGACAAAGTTGCAGACATACATCCATCAAATTAGCAATTGGAGGAAAGTCATTTCCTGGATATGGTTTTTCTAATTCAAATAAGCAACACATGAGGGTGATGATTACCAACAGTGACAAGAAAATTCCTAATCTGTGCATCCATATTATAAATTAGAATTATATTTTGAAAGCTAATATTTTAGACTATTAGAAGATAGATTTCCATCTTCCCCTGTCCCTTCCTCATCAAAAAATTCCTTAGCTTTAAATGACTCTGTGCTCCCCAGGTCCATAGTCCCAGCTATTGAGTTCAGCTGTGAGGTACATAGAACAGAAAGGTCAGAGCTAGTTTCAGGTTGAGAAAAGACTCCTTCAAAGAAATGTCATTTGAGTAAAGACAACATTTCATAAAGAAATCCAAAAATCAAGCTGTATAAAGGAATCAATCACAAAGCAGGTGTCAGGAAGAGTTATTCAAGGCAGTTGGGTATATGTGAAAGCTTATGAAAATGACTCTCCTGAGAGTAGTTTTAATCCTTGAGCAGTTTAATATGTGGATTAATAATATGAAGAGATAATATCCAGGTTGTGCTACCTTCCAGATAAAGAGAGAGAGGATGAATCAAACCAGTCCCAACTCCTATGAAAN TCONS_00014746 TCONS_00014747 TCONS_00014749 TCONS_00014748 r 3' 996 TCONS_00014748 r 5' 0 EMBV3_23605 ATAATTTTCACCCATTTCCCTGGGAAGCAGGCCTGCAAAGCTCCTCACACTGTCATGCTG Gene GeneID:510702|ZNF773:NM_001101932:31_cdna Constitutive 0 NULL GeneID:510702 18 GENE ZNF773 MGC157220 ZNF419 zinc finger protein 773 EMBV3_28443 TGGTTCAAAGTGCCTTTTCCATTGTCATGAACTTCTGTATTCCAGTACCTGGGAGCCCTG Gene GeneID:281250|IL1A:NM_174092:8_cdna Constitutive 0 NULL GeneID:281250 11 GENE IL1A NULL interleukin 1, alpha EMBV3_34945 TATCAGACTAATGTTTGACCTCTGGAAACACTCACCATTATATTTAAGAACATGCAGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31609 GGCTCTGTCATTAATCCTGTCCATGCTCCTTTTCAAACCTGCCCCAATCTACATCCTGGA Gene GeneID:539217|SMC2:XM_002689875:2_cdna UTR3_Alt 2 NULL GeneID:539217 8 GENE SMC2 NULL structural maintenance of chromosomes 2 EMBV3_30674 GGAAAGAACTCCCACTTGCTTTTCCATGTCCTTGCCTTTCACGGACGGTCTCACCATACT Gene BVV0101_025530 + 0 NULL GK000021.2:61963794-61986089 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121817 TCONS_00121820 TCONS_00121821 TCONS_00121818 TCONS_00121819 TCONS_00121822 1 XLOC_073490 NonCoding TCONS_00121822 XLOC_073490 NonCoding NonCoding LOC100847284 21:61983539-61985682 = TSS90653 887 2 TCONS_00121822_2 46 0.0473506200676437 2 0.586834733893557 0.000368659782515473 0.00142640989217922 0.000834633957059002 2.29520017266819e-05 0.000172550525941375 0.000350849592216037 0.000433924516804673 0.00167760285147774 0.00152915712262596 0.000767051849387862 0.000532982998131706 0.000372785659910502 0.000389389129545337 0.00128644213637053 0.000352188904915686 0.00727999340360531 0.00448562577508667 0.00292074675416067 0.000153478881008211 7.18423418098347e-05 0.000277219080481347 0.00261086389505191 0.00556325205147087 0.00409703100169538 0.000585681985938751 0.00027688772328273 0.000425565396531273 0.000993855811407545 0.000993620423858321 0.00241624759600601 XR_139009.2 LOC100847284 PREDICTED: Bos taurus uncharacterized LOC100847284 (LOC100847284), 0.0 1600 100.00 0.998872604284104 NR_003138.3 SNHG10 Homo sapiens small nucleolar RNA host gene 10 (non-protein coding) (SNHG10), transcript variant 1, non-coding RNA. 1e-23 114 81.67 0.134160090191657 0 noncoding 0 0 0 0 0.0420707994259982 0.780992490987556 0.0230596110559395 0.706640599264449 AGACGGCGGCCTCGGCGTTGCCGCGGCAGTGCGGTTGGCCGGTACCTGGGTGGTGAGCTCGCGTTGTTGGAGGGGCTGGAGTTGTTCTCGGTCCTGTGTTGTCCGCTTAGAGTCATTGATTCCAGGTAAATCAGAGGAACAGACATCATGAACAGAAATAATACAGGAAGTGATGTGATGCCGAAGTTTAACTGTTGTTCCAGAAGTCCAGCATCTGTGGCTCATAACTTTAGGAACTGTATCATTTGCAAGGTCACCTAACTTTTACTCATATTGGGTTGGCCAGAAAGTTCACTCAGTTTTCCTGTAAGCTGAGAGAACCCGCACGGACTTTTTGGCCAACCCAATACAGTAAGTTTTGTTTGTTTGTTTTTGTTTTTTTTTAAATAAATATTGACAGTTTGTTCCAGAAAACCTAAATTGTAAATTGCCTACTCTAAGCTGCCTGATTCTCTGCTTGTGTTCACTGGAATAGGGAGAAGAATTTGCAAACTGATTATGTGAGGGTCCGAAATGTAAAACCGAGCCGTGGGGAGTAGCCTGTTTTTTGCCTGGTGTGTAATATCGGCTTTGCCTGTTACAACTGACAGACATTTTATTAAGTTGAGAATATAGCTGTCATTAAAGACTAAGAATAATCCTTGAGCAGGAAGAATATGAACCCTATGTTTTCCAAAATTACGATAGAGTTGCTGGTTACAGTCAAGTATGGTGAGACCGTCCGTGAAAGGCAAGGACATGGAAAAGCAAGTGGGAGTTCTTTCCAAGAGCTAGGTGGGGTGGCTTTGATAGGATGATGAAGGGAGAGAGATCACCTATCCAGACCAAAGAAATTGAAGCAATACACCTAAATGTAAGTTTTTAATAAAGTAACCTAAAGTATAAAA EMBV3_27501 GAGGACCTTTAAACTAGACACTGAATATGCCTGCACCTTGATCTTGGACTTCCCAGCCTC Gene GeneID:513242|TMBIM4:NM_001014914:1007_cdna UTR3_Alt 2 NULL GeneID:513242 5 GENE TMBIM4 CGI-119 MGC129065 transmembrane BAX inhibitor motif containing 4 EMBV3_35056 TGAATCCAGTTGAAGACCAGTCATTTAAGTTATTCATGATATTAATAACTTTGCCACATG Gene GeneID:504746|ECT2:NM_001097573:7_cdna Constitutive 3 NULL GeneID:504746 1 GENE ECT2 MGC138945 epithelial cell transforming sequence 2 oncogene EMBV3_34125 ACAGTCACATCTGGACGGCACCTATGAGGATCAAGAGATTGTCGCTAACCCACCGGACAT Gene GeneID:337916|IRF2:XM_002698652:101_cdna Constitutive 0 NULL GeneID:337916 27 GENE IRF2 NULL interferon regulatory factor 2 EMBV3_21653 ATGAAACAGTAAACAGAGAGTGAATGTTATAACAATGAGATGTATTTTGAGCAGACTTTG Gene GeneID:535066|ELTD1:NM_001076908:71_cdna Constitutive 2 NULL GeneID:535066 3 GENE ELTD1 MGC140518 EGF, latrophilin and seven transmembrane domain containing 1 EMBV3_06624 CTCCTCCTGCACCGCGGCCCCGGGGACCAGGTGGTTTCCTTTATGAAGTCTCCAGTGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40036 TAAGAGAACCGGTAGGTCCTTCCTCAACCTACAATACTGTTCCTGCCCAGAAATGGGACC Gene GeneID:751790|UGT1A1:NM_001105636:35_cdna Constitutive 0 NULL GeneID:751790 3 GENE UGT1A1 MGC139125 UDP glucuronosyltransferase 1 family, polypeptide A1 EMBV3_20325 TAGAAGGAAGCAGGAGCTCAGAGAGGAAGTAGGGGACAAGGTGACCAATCAAGAAACGAG Gene GeneID:538961|ANKRD54:NM_001076137:91_cdna Constitutive 0 NULL GeneID:538961 5 GENE ANKRD54 MGC138967 ankyrin repeat domain 54 EMBV3_02134 TTCGGGGTTCTGCCACTCCCTGAGGCCGGGGGCCAGAAAGGGGAGCCCGGGTACCTTCCA Variant GeneID:509914|PFDN6:NM_001075421:101_cdna 71^151 2 EMBV3_28898 GeneID:509914 23 GENE PFDN6 MGC142467 prefoldin subunit 6 EMBV3_07546 GCGCAAACAAGCAGAGATTGAATGCAAGAACAAGGAAGAAGTGATGGCTGTGAGACTCCG Gene GeneID:536706|EVI5:XM_002686231:239_cdna Constitutive 0 NULL GeneID:536706 3 GENE EVI5 NULL ecotropic viral integration site 5 EMBV3_02346 ATGTCACCTTCCCCAACCTAGCTGCCTACAGCACCACCAAGGGTGCAATGACCATGCTGA Gene GeneID:782391|DCXR:XM_002696111:197_cdna Constitutive 0 NULL GeneID:782391 19 GENE DCXR NULL dicarbonyl/L-xylulose reductase EMBV3_28963 CTTTGCTGTTCTCCACTGCATTCATTCCTTCTTCGCTGCCAAAGTGGCTTGTTTGGACCC Gene GeneID:517353|SNTG1:XM_002692659:93_cdna Constitutive 0 NULL GeneID:517353 14 GENE SNTG1 NULL syntrophin, gamma 1 EMBV3_28642 GTGCGCAGTGGAAACACGATGTAGCCTAAAATCATTGGCTTTGCTAATACCAGCAGGCTG Gene GeneID:540424|LAX1:NM_001015674:106_cdna Constitutive 0 NULL GeneID:540424 16 GENE LAX1 LAX lymphocyte transmembrane adaptor 1 EMBV3_14264 CCTACCCCAGTTTCTCCATTATCCAGCACAGTGCCTCACACAGAATGCACAGAACAATGC Gene BVT0102_084230 + 1 EMBV3_07926 GK000001.2:64865033-64870751 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003546 1 XLOC_000875 NonCoding TCONS_00003546 XLOC_000875 NonCoding NonCoding LOC100847116 1:64835927-64867158 = TSS1812 855 0.362573099415205 2 0.972686519372398 0.00127701193406162 0.000896996529376701 0.000824729761278734 0.000398626598124407 0.000353432395795026 0.000280086380257836 0.000599276027841055 0.000443343952662062 0.00061601383422902 0.000285279761757296 0.000239263098645646 0.000432126609463803 0.000290999018174112 0.000576652383479086 0.000542521986161911 0.00396553185056086 0.00164942643572734 0.00144821763274801 0.00166582436168694 0.000943576967453918 0.000351458693957816 0.00172093470019729 0.000467039380969974 0.00179499629789822 0.00105470352517188 0.00193175094106421 0.000923507108682083 0.00051460499785595 0.000641711841231317 0.000998336822202069 NM_001192736.1 GLA Bos taurus galactosidase, alpha (GLA), mRNA. 4e-31 140 87.50 0.129824561403509 NM_152305.2 POGLUT1 Homo sapiens protein O-glucosyltransferase 1 (POGLUT1), transcript 2e-97 360 71.86 0.766081871345029 0 noncoding 0 0 0 0 -0.027307413021952 0.831444753079413 0.0164340151034225 0.748656009920846 TCTGAGAAGGAAAGGATAAGTGTGGAATTCAGCTAGTATTAAAAAACAACAACAACCTTCAAAAGTTATGGAGATAAAAAATTACTTTCAAAACCATACATTTTATATGTCATTACACCCATCTTCATATCATCTACACTGAGGTAAACAAATACATGTAAAATCTGAATAACATCTGCTGTACTTAAATACAAATGGTCTTATTAACTCTTCAAAGGACAGATGAGAATGTGCATTGACCCAATTCTTAGCGTCTTGTCCAGTCCCTCTTGAAGCCAATGGCTGGGCAGTCTGTAAACAGGATTTAGTTAAGTCCACTGTTCCCATCCATCCATCCATCCTTCCAGCATTGTTCTGTGCATTCTGTGTGAGGCACTGTGCTGGATAATGGAGAAACTGGGGTAAGTAAAACATGATTCCTACCCATCAAGAAGCTCATAGGGGAAACAAAAAAGCTCACAGGAGAAACAGTCAAATAACTACAGTACAGTGTGATGTCATATAATACAGGCTTGAGAAAAATATTATGATAGCCTCTAACTGCCTAGAGTAATGAAAATAAGGAGTCTGAGAGATAATGCTTGAGTTGGAAACACTTCCAGGGAAATGCACCCTCAGCTGCTAATCCAAAGGACAGAAAATTTTGCTCTTAGTTTTGTTGTTCAGTCATTAAATTGTGTCTGACTCTTTGTGACTGCATAGACTACAGCATGCCAGGCTTCCCTGTCCTTCACCACCTCCTGCAGTTTGCTCAAACTCATGTCCATTGAGTTGTTGGTGTTGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACAGAACTGAA EMBV3_25517 TTTCCTCTAGCGCATATCTTATTTAATCCACACCCTGGGCATCAGGCACCAACCGAGCAG Gene GeneID:520580|CDK9:NM_001014935:112_cdna Constitutive 1 NULL GeneID:520580 11 GENE CDK9 MGC139578 cyclin-dependent kinase 9 EMBV3_05530 GCTTAGGAATAGCTTGTATTATGGGAGCTTCCTCCAGCCAAGGAAGGAGTCTAGGAAATG Gene BVT0102_088384 + 0 NULL GK000003.2:70275579-70317746 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178234 1 XLOC_108007 NonCoding TCONS_00178234 XLOC_108007 NonCoding NonCoding - 3:70277973-70278964 - TSS132993 991 2 TCONS_00178234_2 62 0.208879919273461 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.5318774323332e-05 0 0 0 0 1.85147282106717e-05 0.000287587161309671 0 0 0 0 0 0 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 1e-50 205 81.22 0.203834510595358 0 noncoding 0 0 0 0 -0.124155919126161 0.291338525015462 0.0215332667625939 0.679378470898299 CACAATTCACAGCGTAAAAGCTTTTTTTCTGCACAAGATAACTCAAGAACAGCAGGTCACTTTGACCTGGCTCTTTCAGCCTCTTCAACCATGTCTCACATACAGGAAAACAGCTCAGCTCAATCCTTAGTTCTTTTTCCAATGCTACCTTTTCCTTTGGTCCAGTGATTTTTTTTTAAATGTCATTTAAAACTGTCAGAGGACAATTTTGCTAATCCATGGGGCTTAGGAATAGCTTGTATTATGGGAGCTTCCTCCAGCCAAGGAAGGAGTCTAGGAAATGTATCATAGAAAGAAATCTAAATCCACTTTGGACCGTGTCAATGATCGATAGGTGTTGATGGGGACAGTCCATGTATGTTCTTTAAGAGGGAGTCTAACACTGATCCCAACTGATTGCCTGATACAGATGCTCATTAAACGTGTGTTAAATGTGGCGATGGGCTTTCCAGGTGGCTCAATAGGAAACAATGCACCTGCCCGTGCAGGAGACATGGGTCCAGCCCTTGGGTTGGGAAGACCCCCTTGAGAAAGGAATGGCAACCCACTCCAGTATCCTTGCCTGGAAAATTCCATGGACAGAGGGGCTTGGCAGGCTACAGTCTATGGGGTCACAGAAGAGTTGGGCATGACTGAGTGACTGAGCACAAATGCACGCAAGTAAATGTGGCCACCGATTAGCAGTCTTGATTTTATCTTTTCCCAGCTTCATGTAAAGGTATCCACAAAGAGACAACAGTACTAATAACTAAAGAGGAAACCCTGTGCCAAAGTCCATTGGGAATATATACTAACTCCAGTGTCAGTCATTTGACATATTGACCCAAATTACCTGCAGAGTAGGTAAAAAGAAAAAGCCTCCACTCAGTCACTACCTCTAATGCAGGCCACCTAGAGTATCAAACCTTATTACACAGAAAGTATCTGAGCCAGCTAGAGACATATGCCCAGGCCTCAGCATTCCTCATCTCCTTTTTATAGACTACAGGAT TCONS_00170238 TCONS_00170239 . 3' 2267 TCONS_00170238 TCONS_00170239 . 3' 3257 EMBV3_25918 AATGCGGCAAGAGCTTCTCGCAGCACTCGAACCTGGTGACGCACCAGCGCATCCACACAG Gene GeneID:789743|ZNF853:XM_002698153:596_cdna Constitutive 0 NULL GeneID:789743 25 GENE ZNF853 NULL zinc finger protein 853 EMBV3_04484 GTCAGAGAAACCTGTTGGTTATTTATTTTCTGCAGTGTTACTGTGTCACATGGTTGGTAT Gene BVT0102_375753 + 1 EMBV3_09871 GK000021.2:41686536-41692841 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119394 TCONS_00119406 TCONS_00119395 TCONS_00119407 TCONS_00119391 TCONS_00119396 TCONS_00119397 TCONS_00119405 TCONS_00119399 TCONS_00119400 TCONS_00119392 TCONS_00119404 1 XLOC_072894 Coding TCONS_00119391 XLOC_072894 Coding Coding G2E3 21:41612758-41690137 j TSS89426 6482 1 TCONS_00119391_4 728 0.0544585004628201 15 0.916423272764869 1.12773880230682e-124 2.00994148679408e-132 4.7526142295161e-139 5.25032147191022e-86 4.45785964804698e-84 9.35884519082104e-12 0 4.80268927374312e-12 3.92989860188084e-31 2.92365901056239e-19 1.23529418594552e-149 9.01553776853479e-19 2.95595728769287e-147 1.67063188055746e-142 3.18383883118104e-127 6.1791131386688e-10 0.000793334240914297 0.00223454353692029 1.3600378128804e-208 0 6.43826972367825e-115 0.00135150992028524 0.000895673365162639 0.00138345004492959 2.7223133124194e-125 1.55479735038189e-214 1.81320751326893e-159 2.93912019279246e-08 0.000138505450119702 7.38952697333789e-16 XM_005222040.1 G2E3 PREDICTED: Bos taurus G2/M-phase specific E3 ubiquitin protein ligase (G2E3), transcript variant X1, mRNA. 0.0 8069 100.00 0.690064794816415 NM_017769.3 G2E3 Homo sapiens G2/M-phase specific E3 ubiquitin protein ligase (G2E3), mRNA. 0.0 3366 86.39 0.436285097192225 TCONS_00119391_4 sp|Q7L622|G2E3_HUMAN G2E3_HUMAN G2/M phase-specific E3 ubiquitin-protein ligase; 0.0 1292 86.65 0.964285714285714 3 coding 0 0 0 0 -0.0771373099097059 0.719937873649523 0.0346140301055548 0.525044327742835 GGGAGAATTTGAATCGTGTGGGCCGTTTGGTGTAGCAGCTAGAGGATGGCGTGTGGCGCAGCGCGGGAAGGGAAAAGTGACACGGCCTCTCTGGAACTTCTGCCCAGCGCGCCTCGTAAAATGAATGAAAGTAAACCTGGAGGCTCACAGAATTCTACTTGTGTTTTCTGTCGAAAAAATGATGACTGTCCTATTAAATATGGAGAAAAGAAAACTAATGAGAAATGGAATCTCACTGTACATTACTATTGTTTGTTGATGTCAAGTGGAATTTGGCAGAGGGGTAAAGAAGAAGAAGGAGTTTATGGTTTTCTAATAGAAGATATCAGGAAAGAAGTGACTAGGGCTTCTAAACTGAAATGCTCTGTTTGCAAGAAAACGGGTGCTTCAATTGGGTGTGTCGCACCCCGATGTAAACGAAGTTATCATTTCCCATGTGGACTTCAGAGAGAATGTATTTTCCAGTTCACTGGCAATTTTGCGTCATTTTGTTGGAAACATCGACCTGTTCAAATAATTACATCTAATAATTGTAGAGACTCCTTACTGTGCACCATTTGCTTGGAATTTATAGAGCCTATTCCAACTTACAGCGTGTTACGAAGTCCTTGTTGTAAGAATGCTTGGTTTCATAGAGACTGTTTGCAGGTGCAAGCAATAAATGCAGGAGTGTTTTTCTTTAGGTGCACTTTATGCAATAATAGTGATATATTTCAGAAAGAGATGTTGAGAATGGGAATTCATATTCCTGAAAAAGATGCATCTTGGGAATTAGAGGAAAATGCTTATCAAGAGCTTCTGCAGCACTATGAGCATTGTGACGTCCGAAGATGTCGTTGCAAAGAAGGGCGAGACTATAATGTGCCTGATAGCAAATGGGAAATAAAGCGCTGTCAGTGTTGTGGTTCTAGCGGAACACATTTAGCCTGTTCCTCACTACAGTCATGGGAACAAAATTGGGAATGTTGCGAATGTAGAAGTATTCTCTACAGTGCAGGTGAATTCCAGAAAGCCAAAAAACATGCATTACCCAACACTAATGTGGGAATAAATGATTGTTTGTTGGAGGAGTCTTCACCTAAATTACCCAGACAGTCACCTGGAGACCAGTGTAAAGATCTGCTGAGGCAAGGCAGCAAATTTAGAAGAGATATCTCGACTCTAATTATAGAGTTAGGATTCCAAGTTAAGAAAAGGCCTAAAAAAGTATTTATCAACAAAGCCAATTTCTGGAATAGTGCCTTAGATGGATTCAGAAATCAAAACTTTAATCCTTCATATACAATTGAAATAGTGTATGTTAATGAAAATGATCATTTTGGAAGAGAGCAGCCTGGATCAAAGCAAGAATTCCTAAGTCTCTTAATGCAGCAACTTGAGAACTCATCATTGTTTGAAGGGTCCTTGTCAAAGAACTTGTCTTTAAATTCTCAAGCTCTGAAAGAGAACCTTTACTATGAAGCTGGCAAAATGGTTGCCATTTCTTTGGTTCATGGTGGTCCTTCACCTGGTTTCTTTTCTCAGACCTTATTTAACTGCCTTGCTTATGGACCAGAAAATACCCAACCAATTGTAGACGATGTTTCAGACTTTGATGTGGCACAGATTATGATCAGGATAAATACTGCAGCAACTGTGGATGACTTAAACTCTTTAATACATGACTATTATAAGTACCTAGAGTTTATTGGATGTCTAAGACTTATAACATCAATAAGTGATAAATATATGTTGGCAAAAGACGTACTTGTTTATCATGTAATTAAAAGAGTCCAAGCACCTTTTGAGAGTTTTAAACAGGGTCTGAAAACTCTTGGTGTTTTGGAGAAAATTCAGACTTACCCAGAAGCATTTTTTCACATCTTCTGTCATAAACCTGAGAATCTTTCTGCAAAAATACTTAGTGATCTTTTTACAGTACACACATTGTCTGATGTACAGACTTTGGGGTTTTGGAATAGTTACTTACAGGCTGTTGAGGATGGTAAATCTACAGTAACAATGGAAGACATTCTTATTTTTGCTACTGGTTGCAAGTCCATTCCACCTGCTGGATTTAAACCCAATCCTTCAATTGAGTGCCTTCATATGGATTTTCCTGTAGGAAACAAGTGTGATAACTGTTTAGCTCTTCCTATCACCAGTACATATAAAGAATTTCAAGAAAGTATGGACTTCGCCATAAAAAACACTCTAAGATTAGAAAAAGAAGAAAATTCTCACTTCATTTGACATCACCTGTTTTGAACAAAGGGATGCTTCTTTAAAAGCTGCTGTTGGTACTTTTGTTTCAGAAATCTTTCCGTCATCACTTGTGCAAACTTGGCCCAGTAAAATTTATAATATGAACATAAAGGATTGTTTTGGCCACCTAAGCTAAAAAGGATTTTTTGTTAAGGTGTACCAGTGAAAATTAATATTTTTCTATTTTTCTTGATATACATGCTTTCTAAACCTCAATATAAATACTTTTAGAATGGCTGTACAGTCTTTCTTCAAGTATAATATATGCTGTATATAAGCAGAAAACTTGTGCTCACTTTATGTAAATTAGGATTAGCTATAGGATGCCACAATGATTTTTCTGGTTTAATTATGCAATTTTCAAATTATTACTTATTTTAAAGCATTAAGTAGGAAATGAGTGATTTTTTTTTTTTTTTTTATAAATCAAAGGCATATATTTTGGAGTATGTGTTATATGTATCCTCTTCTAGGATGGCACTAAATTAGTTGTTAAAAAATGTTTTTAGATCATTGAGTTATATTAAAATAGATCCACACTGCTGTTAGATTATGCCTTAAGAGATTTATTATATAAGAAAGCAGAATTGCACAAATGCTCAAATATCTATGGACATTCCATAGTCTTAAAACACTTCTGAGGTGAGTTAAAGTATAGTTGAAAATCTCTCAAGTGTCTTCTTTAAAGCCTTGGCTTTAATCATAAGATTTTGTTTTTCTTTGTATCCCATGTGTGGTATTAAACCACAGTGTATATGATCCACAGTTTAAGTTATCTGAATAGAATGATCTCTGTGGATTGCCTTTTGGTAGGTTTGGCTATTTAACAGTTATTTATTATCAGTATGGTTGTTTGATAGGTAAGCTGGAACCATTACATTATACAGCTATTTTCTTTACTTTTGAAAGATACCTGTATATATAAACAGTGTAGAAATATGTAAAAAGAACTACAAAGAATGAAAAACCCATGCTAATCTCACCATGCAGAAATAACTGTCCCTGTATATCCTTTTATTAATATAAACTCTTACATTTCCTTTCTTTTTTAACTTTATTTTCTTCTAAAAGCCAAATACCTAGAAATAAAAAGATTATGCAATAACAATTTGAAGATACATAATCTGACAATTTTACCACCATATCTGTACTTTTACAAAAGAAGAAATTGGAGAAATCTAATGTTCCTAATCTGTTATATAATATAAATGGGTTTTTCACCAAAGTAAATCGTATGAGAGATAAATTGCTTGTTTTTAAGCACATTTTTTTCTAGCTATGCAAAGCAGGTATCAGTCATCATTTTCTCATCCTCTCTGAGACACGTCTGTAAATTACTGATATTTTTAAAGACAAATGACAGGATTGGTGTGATACTGGTAATATAAAACATAGTCCTAGTATAATTTGTTTTGTTACATTTACTAAAAGTGAAACTTTAACTTGAAGGTTTTAAAACATTAAGGCATTTTTTGTCTTGTATTGAATTCTATTAAATTATCAAAAGTAATTAAAGGATCAGTTATCCAAAAAGAAGTTTAAACTCACCATACAGGTTTTATTCCAAATGTGTTGATAAACTGGACATTTTATTTGTTAACCTACCTAGTTTTTATAAAATTTTAAAAGCCGTTAAATCAATACAAACCAGAAAACCTAATTCAAGCTATTTTCTGGTTATTTGTAGTTTGAATTCATTTAATTACAGTCATAATTAAAGCTGTTAAACGCTCACATGCTTTTGAGGTGGGGGCTGCTGATAGGGGGCAGTGTGCTTGTGTTGGCTATGATTAAAAACAGTATTTCAGTTCCTTTTATGTGTAGACAGGGCCTTAGGGATAAGGTGTTTAAATAATAATTTGGGATATTCATGTTTTAAAGGGAGGTATAAATATTCATATTAGAAAATATTTTCTGGTTTTAAGGATGTTCATCAGTATGGTTTTAGATTAATCTTTGAAAATATGTCAGAGAAACCTGTTGGTTATTTATTTTCTGCAGTGTTACTGTGTCACATGGTTGGTATTGTTTTTTTTCTATTGTTATAGCCAATACAGTTTTTATTGCATTTGATTTTTCTAAAGTAATTATGCTATAAACCTTTATAAATGTGAATATGTATTTCTTAAGTATTTCAATTGTCTAAATGCCATGTATGTTCAAGCTTGTTCTCTGTTACTCTCAATATCAAGAAAAACCATAAATTCTCCTCTTACCTATCTGCTGTTAATGGTCTTAGTTTAGTTTTCTATTCATTTTTTTTTTAAACAATTAAAAATTTTTTGGTGTGGGAACTTCATCTGAAGGCATTTTATACAGTTCTCTACTATTCTTGTACATAGTCATTTTACTATTATTTAGGGTATTTAGGGTAAAGATACCTTAAAATATCTCTTCAGAAATTAGCTCCTTTCTTTATACTCTGTAATATTTAATTTCCATATTATAAATTAGACATTATTTGTTTGGGTCAAGTAGAAAGCTTACGTTTGATTACTAACCTGAGAATTCACTTTGGCTTCTACATCATTTCAGGCTTGTAATTTTTTTCTCCTAATTATATGGAAGCTGTTGAAACTTTTTTACTCAATACTGAATGCACAGTAGAGTGTCATAGGTAAGGTTTTTTTAAGATAAGCCTTTTAAAACTGTAAAAGGCAAGTGACTTGGGCTTTTACATTCAGTCATTATAAGAAAATTATTAGAACAAGATCCTTTTTATAAATTTGTCTTATATATATATATATATAGTGATTATCACATGCTTTGTTGTCACTTTTACAATAAGCTGTTGATCTAGGTTTTATGCTCTAAGTGATCCAGTGTAAAACATAAAAATGTATTGATGGATTTCTTGAATATGTATTACTCACAGTTTACGAAAATTTGAATTGCCTTGAAGAGATCCCATTTTCAAGTTCTCATGTTGACTTTTACCTTCAAATTGCCAAACATACTCCAGTATCTACTGTATGCCAGGTATTATGTTATGTGCTAGTTTATGTCAGCCTAATTTCCCTTTTTTTTTAAGGCTTCAGAACAACCAAAAACATGACACATATAATGAAGTTTTGTAAATAAATATGTTTATGCTACTAAATGTGAAGCTCTTACATAAAGTAAATTAAGTAACTTGTTAGGATTTAACAAGGTTAAGATTCTGACAGTACTGGGTAAATAACAAGATCCTTTCCTCTCCACATTTGGTAGATCCTGCTAGCAGCTGTTGGCTAACATTTAGGAACCTCTTGAATGAGATGGTGTGAGATATTCTGTGTTAAAATTATCTATTCCTTAATGTAAAATAATAGTTTGCAGAATAAATGTATTATTTAAGTAAAAAATCTGGATAGGCAGAGTCAGTTAAAAGACTAAAACATATTAGGTTAATTAGCACTCGTAACAGCCCATAGTTTAATTCTTTTTTTCCAGTAACAGAATACCTTACTCAGTCTTAGCCTTATACGAAGTATTTGTTTATTGCCACTCTTCTGTGGGATTTTTTTAAGTGTTTATTGACTGTGTTACAGAATTGCTTCTGTTTTATGTTTTGATTTTTTGGCCATGAGGCATGTGGGATCTTAGCTCCCTGACCAGGGATGGAGCCCTGTATTGGAAGGTGAAGTCTTAACCACTGGACCATTGGGCAGGTTCTGGGACATACTTTTCTATACATGCTCCACACTCTGTGCACTCCTTGGTTTTGTGTGTTACTCACTCGTGTCCAACTCTTTGCAACCCCAGGGTCTGTAGCCCGCCAAGCTCCTCTGTCCATGGAGTTTCCCAGACAAGAATACTGAAGTTGGTTGCCATTTCCTTCTCCAGGGGATCTTCCTGACCCAGGAATCGAACCTGAGTCTCTTAATATCCTGCTTTGGCAGGCAGATTCCTTACCACTAGTGCCACCTGGCCAACATGGGGACATGCTCCTTCACTAAGGCATGAAATCCTTCCATTCACTGTAACATCTTGTGCTGAAAAATGTGTCCCAAGGTGTCTCAGGACTATTTCCTTGGTTAGGACAGTTTTTATAATTTCAAATGTATATACTGTACATAAATGTTAAACAGGTCTGAGTGTTTTATATCAATATGACTCTATTTGGGGAGGTATATGCTGGAGCTGAACTAGTTAGATGATAGATTTGCATTGAAAGTAGAAGTGCCCAATTGATCAAGATTGGGCTCTCATATTGAAGGGAAAGCCTGTTTATTTTATATTCCATAAGACAAAATAAG EMBV3_42005 GAAGATTTATTGTGTAATTGGCAAGGTGAGGCACCAGGGAAGAAGCCGCTGGTGAGTGTC Gene BVT0102_155508 + 0 NULL GK000018.2:24165539-24205241 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18276 CACTGAGGAGGACGAGGAGGACTCAGAATTAGAAGAGGAGCACTGGACTGACATGCTCAA Gene GeneID:510858|GIYD1:NM_001037456:284_cdna Constitutive 0 NULL GeneID:510858 25 GENE GIYD1 GIYD MGC128227 GIY-YIG domain containing EMBV3_04194 AGCTGCAGGGACATTGTGCTCGGTTTTAGTTCCCTAATGTGTGGAGTAAGCAGGGCTGGT Gene BVT0102_024027 + 1 EMBV3_07718 GK000002.2:69917271-69928636 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105508 TCONS_00105504 TCONS_00105509 TCONS_00105507 TCONS_00105503 TCONS_00105505 TCONS_00105506 1 XLOC_062583 Coding TCONS_00105509 XLOC_062583 Coding Coding CCDC93 2:69924502-70029582 = TSS77838 6891 1 TCONS_00105509_5 631 0.0789435495573937 24 0.934649168720677 0.000251923894449239 0.000570112484091296 0.000225788868671294 0.000172680890774482 0.000133981688435238 1.13276580396052e-06 2.61361152226466e-09 5.93324030104713e-08 0.00068242661995488 2.54201313041302e-09 2.79455640874179e-12 4.28078602477944e-24 2.32203126452622e-09 1.8861095980715e-08 3.7986477692936e-08 0.0003070071768539 6.79394951632214e-09 0.00031487242087952 5.34898087440715e-10 1.04932734834094e-09 8.37128759413644e-09 1.36963077994095e-05 1.26734122377631e-08 1.97337620484566e-10 4.63589942952905e-07 0.000420639872898794 0.000342265738801542 2.36010801420754e-18 2.75304460940136e-05 4.33989135104578e-09 XM_005202544.1 CCDC93 PREDICTED: Bos taurus coiled-coil domain containing 93 (CCDC93), 0.0 1.211e+04 99.94 0.975910608039472 NM_019044.4 CCDC93 Homo sapiens coiled-coil domain containing 93 (CCDC93), mRNA. 0.0 3048 85.68 0.381657234073429 TCONS_00105509_5 sp|Q567U6|CCD93_HUMAN CCD93_HUMAN Coiled-coil domain-containing protein 93; 0.0 1207 93.66 0.998415213946117 1 coding 1 1 1 1 -0.196378610231296 0.275002424049716 0.0236917570226449 0.618956526338214 AGGCGCAGTCGCGCAACACTCCGGCCCCAGCGCGCATGCTCCACCGAGCTGCAGCGCTCCAGGCTCCCGGCGGCGGCGGAGGAAGTTTCCGCTCTGCACTCCACCCCGGTAGCAGCTTCGGGGCCGGGGACAGCTTCCTCCGGACGCTCGGCGGGCTTCGCTGCCGCCTCAGGGCGGTCCGACGGGATCATGGGGTTGTCAAAGGGGCCGGAAGGCCAGGGTCTCCCGGAGGTAGAAACAAGAGAAGATGAAGAGCAGAATGTCAAGTTGACTGAAATTCTGGAGCTCTTGGTTGCAGCTGGGTATTTCAGGGCAAGAATTAAAGGCTTATCACCTTTTGACAAGGTGGTGGGAGGAATGACCTGGTGCATCACCACTTGCAACTTTGATGTGGATGTTGATTTACTCTTTCAGGAGAACTCTACAATAGGTCAGAAAATAGCTCTATCGGAAAAAATCGTCTCCGTCCTGCCAAGAATGAAATGTCCACACCAGCTGGAGCCCCACCAGATCCAGGGGATGGATTTTATTCACATATTTCCTGTTGTCCAGTGGCTGGTGAAGCGAGCTATAGAAACAAAAGAAGAGATGGGTGACTACATCCGCTCCTACTCCATATCCCAGTTCCAGAAAACCTACAGTCTGCCTGAGGATGATGACTTCATGAAGAGGAAAGAAAAGGCCATCAGGACAGTTGTTGACCTCTCTGATGCTTACAAACCTCGTCGGAAATACAAACGCCAGCAGGGAGCAGAGGAGCTGCTAGATGAAGAGTCGCGGATCCATGCCACGCTTTTGGAATATGGCCGGAGATATGGATTTAGCCGCCAGAGCAAAACAGAAAAGGCTGAGGACAAGAAAACGGCACTTCCGACGGGGCTGTTGACTGCAGAAAAAGCTGATGCCCACGAGGAGGATGAGCTTCAAGCTGCTGAAGAACAGCGTATTCAGTCCTTGATGACCAAGATGACCGCCATGGCACATGAGGAGAGCCGGCCGACCGCAAGCTCCGTGGGCCAGATCGTGGGCCTATGCTCTGCCGAGATCAAGCAGATTGTGTCTGAGTATGCAGAAAAGCAGTCTGAACTGTCAGCTGAAGAAAGTCCAGAAAAGTTAGGAATCTCCCAACTACATCGGCGAAAAGTCATTTCCTTGAACAAGCAGATTCTGCAGAAGACCAAACAACTGGAAGAGCTTCAGGCAAGTCATACTGACCTACAAGCCAAATACGAAGGAAAAAAGAAAACCCTGACAGAGCTCAAGGGTCACAGTGAGAAACTGGACAAAGAGCAGACAGCTCTCGAGAAGATAGAGGCCAAAGCTGATCCGAGCATCCTGCAGAACTTGAGAGCCCTTGTAGCCATGAATGAAAATCTGAAAAGTCAGGAACAGGAGTTTAAAGCACATTGTCGAGAGGAGATGGCACGGCTGCAGCAGGAAATCGAAAGCCTGAAGGCTGAGAGGGCGCCAGGCAGAGATAAAAAGACCCTCTCTGGGGGAGAGTCACATGGTGCCTTAACCTCTGCGATGACGCACAATGAAGACCTAGACAGACGGTATAACATGGAGAAAGAGAAACTTTACAAGATCCGTCTACTACAGGCTCGAAGAAATCGAGAAATAGCAATTTTGCATCGCAAGATTGATGAAGTGCCCAGCCGAGCCGAGCTAATACAGTATCAGAAGAGATTTATTGAACTCTACCGCCAGATTTCGGCAGTGCACAAAGAAACCAAGCAGTTCTTCACTTTATATAATACCCTGGATGACAAAAAGGTTTATTTGGAAAAAGAGATCAGCCTGCTGAACTCCATTCATGAGAACTTCTCACAAGCCATGGCCTCCCCTGCTTCCCGGGACCAGTTTTTACGTCAGATGGAACAGATTGTAGAAGGAATTAAGCAAAGTCGAATGAAGATGGAGAAGAAGAAACAAGAAAACAAGATGAGGAGAGACCAGCTGAACGACCAGTACTTGGAATTGTTAGAAAAACAGAGGCTGTACTTTAAGACCGTGAAAGAGTTCAAGGAGGAAGGCCGCAAGAACGAGATGTTGCTGTCCAAAGTGAAAGCCAAGGCCTCTTGAACATTCCCAGACATCATTGCACATCATTGATGTCTTCGTCTAAACGCCATGTATCAGCTCCGAGATGGTGAAATGGTTCTGGACACTGCAGCAGAGATGTAGGTGTGATGATCTCAACACGGGATATTTCCTTCCTCCTCTTTGCTCACATTGCATCTCCATGGTGGCTGTTGTCTATGGGATCGGACGGTGCAGACATTGTGGCTTGGATAACACCCATCCTCCAGTGAAGAAATGTGGGCAGTGTCTGTTCTCTGTGTCGATTCTACTTTTATTTCTCCAGTAACATTGCACATATGAAGGTACCTGTATTTGAATGGACTCTGAATAAAGAGGAATTCATTTGTTCAGTAATGTTAATTGAGCAGCTGCTGAGGAGGAAGCACTGAGCAGGAGGACACAGACCCTGCACCCAGGCTTCCAGCACGTGGCCCCAGAGCTTGATCACGGGGACTTTTCTTTTCTTAGTAAACAAGGCTTTTAGCTGAACGACCAGCCCATGTGAATATTGGTCACTTGGGCCTCTCACTTGCCGTGATGCCTTTTGTTCCTGGTCCCTCGGGGGCTGCTCAGCAACCTTAATGGTGTAGCAACTAGAATGAAAACTCAGTGTCTGCCCTTGGCTTCATCACACTCACCCAAGTTCATCTCACCAAAAAAAAAAAAAAAAAAGACCTCAGCTTGGCACGTAAGAATGACACCTCACCGCTCCCTGCTCTCCTGTGAGTCTCAGCCAGTCTGTGGGTGGTCTTGTGCATCCTCACTAGGAGTACATCACATGCTCCCTGCTGTGCATAGGTCAGGGCTGGACCCAGAGGCAGGCTCGCCCACAGTCACCCCCGTCCAGGCCAGTGTGTAAATCCTGGAGGGACCGGCCTTGAGCAGGTGCTGAGGGTGTCCGAGCAGGAAGAGCAGCCAGGTGTGCAGAGATCCAGGAGTTTTCACGGAGCCAGCTGGGTTGGGCTGGATCCGAAGGAGGAATCACAGTTGAATAGAGATTAGTGGAAAAGCCATTTTGGATAAAGTACAGATGTGATTAAAACTCAAAGAGTGCAGGGAGAGTATAAGGCATGCTTGTTGGGAGAGGGGTGGGTGGCCAGTCTCTGCAGGGGGCTTTAGAGACTAGTCCGGGAAGGTGGGCAGAGACTCACCCTTTGCAGAGCCTTGAAGGAAAGACAGAGGGCTTTACGGTTTCTCCCGGAAGGAGTCCATCCAAACAGCCCCTTCTGCCCCGGCCCTCAGGAATCGCTCAGGGTCAGTGAACCCAGCATGAGCAAGGCTTGCACATCATTCCACACAAGCCTTGCAGGTACCAGTCAGCAGGTTTGGGCTATGAAACATAAAAGCTTAAACGTGCAGTGAGCATGCTGCGTGCAGCTGCAGGGACATTGTGCTCGGTTTTAGTTCCCTAATGTGTGGAGTAAGCAGGGCTGGTGTGTACAGACTTAAAGAATCTCATGCTGGATCAATGACCCTTGGCTTCTGTGCTGGTCCAGCAAGGCCCGCCCAGTGAGGAGGCTGCTCCCCGTGCCCCCACGTGCTGATGGCACTGTTCCTGATCATGTACTTCTCCGCCTGGGTGGGTGCTGGTAGCCTGTGGATTTTGAAAGGACTCAGTGAGGCTGAAGCCAGTGGTTGCCAGAGTGCAGGTAGAGCTCCAGGGGCAAGGGAAGGTGGGGACGGTAAAACTGTAAACTATCTCAGGTTCAGGAAAACACTTTGGTGATCTTGCTGAGAAGCTCACAGGCCTAACAACTTGTGAGCAGGTAGACTATTTGTGTGTTGTCCCCAGGTTGTGGGAGGAGAAATGGGTTATCCTGGGGATCATGGTGGCACCCCCTCTCTGGATGACTGAAGAAAGTTGGGCATGGCTAATCCAGAGGAACTGATGCGTCTTCTGGAAGTGGGGGTATTGACTTTGGGCTGTGTTTCCACAGAGTTTCATTCGGTTTTGGTATAGGGAGGTATCAGGAGATGATGTTTCCATTTTTTAGTCCCTTAGGACTAAGGGATAAGGCCTGAAAAAGATAATAAATCCGTTTCTGTTCCTTGAACATATCTTGAATTAAACTGCAGAAGCCAGTCTTGAGAATTCTGTTTGCTACAGATAACCCACAGCACGGATAGTGCCTTTGTGAGTAAAGAGGACGTTAAATGTGCTTTATATAGTCAGGCCTCAGAGGTCAGGGGGCCTCCCAGGACCCATTCTGTATGCGCAGAGGATGGCTGGCTGCTCTGCTGAGCCCACAGGCTTTTCTGGAGATGAAAAATACATCACAGTTGTAAAACATATGCTACCAGGAGAAGGAGATTTCCCCAGGAGCAGTCTGTCCTCCCTGTTCAGTCAGGGCAGTGAGCTTGCTGGCAGCTGGTGCCTGGGATTCTCAGGAAGCCCCTGGGCTGGGCCCCCATTCCATGTGCACCTTAGGGAGTCAGAGCCGCTGTGAGCAGGACAGACTGACGACCTCCAGGCACCTGAGAAGACACTCGGGTTGCGTTTGTTACTGTCCTTGGCCTGGATTCAGGCTCCTAGGTCACTGCTCAGCTAATTGCACCAAGGGAGGTGCCGAGGTTACTCGTCAGGAGCCTGAGTGGGCACAGCCCAAGTGCGTCAGGCCTAAGCTCTCATTAGAGTCTGCAGGATGTGGTTTTAACTGGGTTCATTGCCCGTGTTCTGTGGAGAGCTGGCTGTCCTGCCAGCAAAACCAGAAGGCAGAGGGGCTGGTAGACAGGAGACCTTTCCCAGGCTGAGGATTCACTCCCTGACAATCCCTGCAGCTCCTGGGCCTCCTGAAACCAGGCGCAGGAGACAGGGGGGACCTCGAGCTGTCACATTGACCAGAGCAGTCTTGCCTGAGGGCACTTTGGGCCCATGGCCTGCAAACCTATGCCACCTGATCCCTGTCACCTCAGCACAGCCTCGTGTTGCCCTCTCTGCAGGTGATCAGGGAAGTGGCCTTTTAGCAACAAGTTACCATGGCTTGAGCCTGAGATGCAGTTAACTGACTTGAATGAAACTGAGGAAGGAAGTGCTCTGAGTCGTTCATGGCCATTGGTGGCCTTAAGCATGACTCGCTACACAGCCAGACAGTGAAGAGCCCCCGTAGGGCGAGGGCCCAACTTCTGTCCAAGTGGCTGGCACTGGCCAAGAGAAGGGCCTTGTGTGATGTGTCCTCAGAGTCCCCAGGCCTTCTCTTGGTCCTTTGCCCCAGCCATGACAGTTCTGTCTCATAGCACACGGTGATAGGCTAAAAATGCTATATAAAAAAATAATGTTATAGTCTCCCTGTCCTCACAGTAAATGTGTAGAAATGTTAGCGGGGATTTAGCAGCTGGTCTGCAGCCTCTTTGAGGACGTGGGGAATACGATGGACTCTCCACGTCAGCCTTTCGTCAGTTCCTCAGAGATGCCAGGCTCACACTGCCTTGCCTCTGCCTGGACCTGTCTCCCTCCAAGACTGTGGACAAGGGCTTTCCCAGACACCTGATGCTCGCACAGATGCCTCGGTGTCAGCCTGCATCCCTGACCACACCCTGCCCTCTCCCCTGCTTTCCGTCTTGACGGCACACTCCCTTAGTCCTGTGCGACCCCTGTTGGCTGCCTCCACTCTGGGGTGTAAGCGGCAAAGGCAGGGACGTCACCTGTGGTGTTCTCTGCAGTCTCCCTGGCGTCTGACTAAAGTGGGTGATCAGGAAACTCTGGCTGGGTAAAATAGCTTCTACAAACCGCAGCTATGTGTCCTTGTATTAGCAGAGTTTAGATTGAACCTTTCATCTGATTTGTGCTTAGCTTGAGAATGAGGGGGCGATTTTATTCAGCCACTTTAGAGAGTCTCAGAGTGTTTGTTACACTGTAACCTTGATGGCTGAGATGAGAAGGGTGTCCGAGGTTTCAGACCTTTCAAAGGCATTACTTTTTGCAGATGGTTTTTGCCCCCCATGCAGATGGGGGGAGTGGGGGGAAAAGGGAACATACTATTGTCAGAGATTAGGTCAGGAGGATGTCTTGGCTCAGAGTAAACCATGCATAAAGGTAGCCTGGCTGGTTAAATGACTGAGCCACATGAAACCAAGCAGTGGGAAGCACCCTGGAAGCATACTGTGTTGGCAGAAGTATGCACGGTACAACCGCATGGAGGTCAGTCAGACAGTGTCTATCAAAAGTGCAAATGCACAAACCTTTCAGGTCAGCAATGCTACGTCTAAGGATTTTTTCCTATATACAAGGATTTGCATTTCAGCATTATTTGTAATAGCAAGAAGATGGAAACTGCCACCAACATAGGGCAGTGGTTAAATAAATTGTGGCAAATCCATACAATGGTATATTAAGCTATTCTCTATCTTCTACCATGGAATGATCCCTAAGATGCATGGTTAAGTGGAGATAAAGACTTGGCTTACTAGTGTTTGTTTCTGAAAATAAAAGGAAGAGGGTGGGGAAAATGTGGCTGTATATATACTTCCTGTATGTGCGCATAGTTAGAGAATCTCTAGGGGGATCCACAGGAACCTGACAGCTTCAGCTGCCTCTGGGATGAGCGGTGGGGGTTACTTTTCACAGTTTATGTTTTGTATCTTTTGAATTTTGTACCATGTACATGTAATATCTATTAAAAAAATAAAGTTTTTAAATTTTCACTTTGTTTACATTTTTAAAAAAAGAAACAAGGTGTCAGATTTTTGGTGAGTAAATCCGCTTTCCTTAGAAATGTAAAGTCCTTGAGCCCAAAGTAGTTGATCTCATTTTCTCAGGTGTTAGGGAAAACAGGGAAGTGAAGGGGGGGCCTCCTCTTCTGGAAGAAC EMBV3_30524 TTGACCCTAACCTGCATTCCTCCTGTAAATAGGGAAGCTGCTGTCGGCACCATAGAGTCA Gene GeneID:534482|FSTL1:NM_001017950:74_cdna UTR3_Alt 2 NULL GeneID:534482 1 GENE FSTL1 MGC137830 follistatin-like 1 EMBV3_23370 TGGAGAAGGGTACAATATCCCCACTTCAGCACATCGGGAGAAAATGGAGCTGTTCGACTT Gene BVV0102_075816 + 0 NULL GK000016.2:43064264-43258247 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069254 1 XLOC_041899 Coding TCONS_00069254 XLOC_041899 NonCoding Coding - 16:43069470-43085171 - TSS51666 505 2 0.96796178343949 1.02785673830948e-166 0.000361232691539877 7.9861451861968e-05 7.0207733775974e-42 3.23835918288745e-82 1.10243871312129e-29 0 0 0 3.61744920824035e-192 0 0 0 0 0 0.000619513139544892 1.73683492791283e-31 0 0.000499843322333776 0.000369889204563934 0.000456779119569316 0 6.36554052989094e-48 3.82981894744566e-48 8.32817330663715e-140 0.000115348762097445 0.000261923212040613 2.16914444306207e-05 6.72861643999736e-05 0 XM_005216984.1 PTCHD2 PREDICTED: Bos taurus patched domain containing 2 (PTCHD2), 5e-115 417 100.00 0.455445544554455 0 noncoding 0 0 0 0 -1.21549140009726 0.00538746949908981 0.0307854968613583 0.563878713052226 AGCTGAGCTCCGGATTGCGCGCTGGGGAATGAGACACACACCCGGCAGTGCACCGTCTGTGCGCTCTGGAGCGGAGCGGGGAACCCTGGTCTCTCGCAGCTCTTAAGAGCTTCTCTCTGCGACTCCCGCGACGGGACAAGTCCGCACGGCAAGGTGGCCGCAGCCCTGGGCCCCTCCGGTGTGTCTCCCTCCCGCGCCCGCGGCTCAACCAGCTCAGCTTGGCCAGCCGAGATGAGCTGAATTCACCAAAGGGGAGATCCATAACCAGGGAGTGGAGAAGGGTACAATATCCCCACTTCAGCACATCGGGAGAAAATGGAGCTGTTCGACTCAAAATACTTCATTTTGAATTTCTGCCTGAATCTCTCAGCCCAAGAGTAAGAGAATCAAAGACCCCAGGATGTTTTCAAGGACCAGGGAGGCAAAACACCCTGAGACAAGAAGAAAAAGCTGATTAGCTCCTAATTGCCGTTAAATTATATATACATATATGTGTTTTAAGCCG TCONS_00069249 TCONS_00069251 s 5' 5205 TCONS_00069249 s 5' 0 EMBV3_18753 CAAACACTGCATTTCTTGACCTTGACCCTGGATTGTTTACTTCTGGGAGGGTTGTGGGGG Gene GeneID:511229|LOC511229:XM_002684982:77_cdna UTR3_Alt 2 NULL GeneID:511229 1 GENE LOC511229 NULL similar to mCG142710 EMBV3_01471 CAGGTGCCAATTCCCTTCTGGACATGGCCAGCAAAATCCGAGAGGACCCGCTTTTCATCA Gene GeneID:512527|CWC25:NM_001105359:97_cdna UTR3_Alt 2 NULL GeneID:512527 19 GENE CWC25 CCDC49 MGC143049 CWC25 spliceosome-associated protein homolog (S. cerevisiae) EMBV3_01333 ATAATTAGATACTTTCCTGTGTTCGAAAAGGAGTACACAGTGAAAATCAGTAATATCCCT Variant GeneID:533917|GSTA4:NM_001015651:311_cdna 448^579 1 EMBV3_19903 GeneID:533917 23 GENE GSTA4 MGC134107 glutathione S-transferase alpha 4 EMBV3_16101 GTATACTGTCCAAGCCCATTAAGTGGCATCACACCTCTACTTTACGTAGCTCAGACGAGA Gene GeneID:616654|ASB17:NM_001076430:95_cdna Constitutive 1 NULL GeneID:616654 3 GENE ASB17 MGC134010 ankyrin repeat and SOCS box-containing 17 EMBV3_06687 TTCTGAAAACTGAAAGGGCAGGTAAAGTTGGGGTGATGGGAATCTTCTACAAACAATTAT Gene GeneID:541081|LOC541081:XM_002699700:31_cdna Constitutive 0 NULL GeneID:541081 X GENE LOC541081 NULL similar to Obg-like ATPase 1 (GTP-binding protein 9) EMBV3_12269 ACTCTGAAGTACCTCGTGTAAGTGAGGTCACACATTTGCCTTTGTGTCCTGGCTCATTTC Gene GeneID:615905|ZNF34:NM_001083520:125_cdna Constitutive 1 NULL GeneID:615905 14 GENE ZNF34 NULL zinc finger protein 34 EMBV3_23211 GGATGACTCATTTGGGACTTTGCGCCATCAACTGAATGCGATCCATTCCCGAGTACCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14862 TGCTCCTGGCAGAAGCCTATGGATCTGGAGGCGCCGGCAACCACAGCTACTGCCGGAACC Variant GeneID:512082|PIK3IP1:NM_001075552:56_cdna 174^290 1 EMBV3_41206 GeneID:512082 17 GENE PIK3IP1 NULL phosphoinositide-3-kinase interacting protein 1 EMBV3_11999 CCTGTGTCTGCCCGCGCTGTTTGCCATGATTTCCAGATAGGGTTTCTCCTCCAGCAGATA Gene BVT0102_369341 + 0 NULL GK000012.2:90541990-90546659 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14542 TGGCTCTGTTTTCCTGATGGTGCCACTCCTGCTCATCCTTATCTCCTATGGTCACATTGC Gene GeneID:516409|LOC516409:XM_002689066:64_cdna Constitutive 0 NULL GeneID:516409 7 GENE LOC516409 NULL similar to rCG58596 EMBV3_11140 TTCAATGGGTTAAGCTCCCAGCTACCATGCCGGAGCCAGTTTATTTTCACTGTGCAGCTG Gene GeneID:505844|KLHDC10:NM_001075227:155_cdna Constitutive 1 NULL GeneID:505844 4 GENE KLHDC10 MGC151950 kelch domain containing 10 EMBV3_28004 CTGTCCGAGCCGGCTGTGGTACAGAAAAGAGCCTTGGTGACAGCCGCCCATGGGCAGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05520 AACGAATGGGAACTGCTCAAAATGGATTTTATTTTTGAAAGTTAAAATTTCATGGCCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16533 CGGTGGGTGTGACACAGCAGACTGCATCTGGATTCCAGTTCTGAGATGGATTTAAGCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09544 CATGGCCCTCCTCAAATTCCTGAGCCACAACTTCTACCTGGACCCCAAAGAGGACTTCAA Gene GeneID:100298420|LOC100298420:XM_002692783:54_cdna Constitutive 0 NULL GeneID:100298420 14 GENE LOC100298420 NULL hypothetical LOC100298420 EMBV3_30951 ATCAGAATAGAGGAAGATGGTTGTCGCCGCAATCCTGGGCTTTGCAAGGCGCGGTTTAAT Gene GeneID:100337153|LOC100337153:XM_002698161:629_cdna Constitutive 0 NULL GeneID:100337153 25 GENE LOC100337153 NULL hypothetical protein LOC100337153 EMBV3_26606 CCCCCAAGCCCTACGTCTCCCAGATCTCTGAATACAAACTGGAACTGGCTCTCAAGTTCA Gene GeneID:517537|FRMPD3:XM_002699879:110_cdna Constitutive 0 NULL GeneID:517537 X GENE FRMPD3 NULL FERM and PDZ domain containing 3 EMBV3_20575 AGCCTAGTGAAGGGTGTTATTCCGGGAATTGTTTGGATGACGTAATGGACCAAATGCAGC Gene BVV0102_160438 + 0 NULL GK000019.2:24847111-24861104 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07743 ATCAGCTGTGTTCTGGTGCTGCTGGTCATCCTCAACGTGATGCTCTTCTACAAACTCTGG Gene GeneID:517332|GRAMD1B:XM_002693036:296_cdna Constitutive 0 NULL GeneID:517332 15 GENE GRAMD1B NULL GRAM domain containing 1B EMBV3_39759 CTGGTAGACACCCTCTCCCCGAAGGCCAAGGACAGCATGTTAGAGCTCCTGATGAAAATA Gene GeneID:767867|SCGB1A1:NM_001076976:124_cdna Constitutive 0 NULL GeneID:767867 29 GENE SCGB1A1 UGL secretoglobin, family 1A, member 1 (uteroglobin) EMBV3_32707 GACCGAATTATCTGCACAGTTCTCTCATGGACTTCGTATCTCAAGGGGGTACAACAGGCC Gene BVV0102_077242 + 0 NULL GK000009.2:35673430-36551273 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42924 AAACAGGCTTTTGTTCAGTGAAGGGAAAGACGCTGCCTGAGTCGGTGGAGGATGAGAGCT Gene BVT0102_262748 - 0 NULL GK000009.2:102300974-102666695 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238206 1 XLOC_144916 NonCoding TCONS_00238206 XLOC_144916 NonCoding NonCoding - 9:102298813-102335140 - TSS177915 967 2 TCONS_00238206_1 102 3 0.973462533722403 0.000506520841640589 0.00156909384998616 1.913961338999e-05 0.00011163804319256 0.000234859963145002 0 0.000162829741324773 7.9515326734564e-05 0.00071802700844918 0 4.73462383575506e-06 0 5.93440846544868e-06 0 0 0.00155683903441087 0 5.18942465163739e-05 0.000163144208209381 0.00127170022999804 0 0 0 0 0.00144731466639719 0.000466298256151608 0.000733151358960855 0 0.000200810992036139 0 XR_232192.1 LOC101908932 PREDICTED: Bos taurus uncharacterized LOC101908932 (LOC101908932), 0.0 1133 100.00 0.648397104446742 0 noncoding 0 0 0 0 0.00805359890091101 0.944636708829871 0.00511147394822292 0.931544438150774 GAGGTCAGCCCACAGCCTCAGAGACAACTGTGAACTAAAGCTCAAATTTGCGCCTCAGACAGGAGGCGAAAGATGGCGTCTGAAAAGGAACCAAAGGCAGTCGTAAGCTGTAACCCAGGGCCCTCCAGGGCCAACCGGAAGCCGAAGGCTAAGTGCTTCCGGTCCATCCGCTCTGTTCGCCGTGGCCCAGGGGTGGACGTGGACGTGAGGCCTCACAAGGCCACCCGCAACTCCTCGGAGGTCCCTGCACCGTCTCTGCCGTCCTTGTTTCCCTCAACTGCAGTCTTCCGAATCCTTGAAAAGTTCTCAGGACTCCAGTCCTTTCTTGCTTTTCAGTTGGCCATTTTGACCACTTCAATTTCAGAACTTAAATTCGGATAATTCCTCCTAATCGTTCCAATGCGCTCGAGGTCTCTGCACGAACTGCAGCTCTCATCCTCCACCGACTCAGGCAGCGTCTTTCCCTTCACTGAACAAAAGCCTGTTTCCGCGGCTTCCAACTCTGCGCAGTGCCCACACGCCTGCCACCCACCCGTGCCTTCCTTCTGTCAAGTCGACTCCCTCTTCACATGGCTCCCGCAGAAGCCTGTCAGTCAAGGAGGACCAGGAAGCCAGATCCCAGCAACCCCACGTCTCACACACTCCCGCTAAACACCACACAGAAAACTTCAGGAAATCCAGCTGCCTCCCTTTCACACTGAAGAGCGGGAGCAGAGGACCCGCTTTGCTGACCCTGAGAAGCAGGACAGACCCCCAGGAGCAGATGAGCCATGAGCCAGCGGAAGGCGGCCTGGACGCCTGCGATGCCTCAGCAAACTCAGTCATCCTCTAGCCAGGTGGAGATCGCCTCCGATCTATAGAAGTCTCCAGAGCAAGATCTATGGTTTCCCTTCAGCCTTAATCATAGGAAAAAAGCTGCTTATCCCACCAGTCAAGATGCCTCGAAGAAAAAGCAGCGCCAGCCAGC TCONS_00238200 TCONS_00238201 s 5' 166207 TCONS_00238200 TCONS_00238201 s 5' 166361 EMBV3_28980 CTTCCACCTCTCCCCAACTGATTCTGCCCAGATAATCGTGTGTCTCCTGCCTCCACTTTA Gene GeneID:784764|LYPLA2:NM_001080362:308_cdna Constitutive 0 NULL GeneID:784764 2 GENE LYPLA2 MGC139872 lysophospholipase II EMBV3_02428 ATGCCAAGATCAGGCCTGGGACCAGGAAAGATGATTCCCCCACCACCTCCCATATGTCCA Variant GeneID:281492|SMN1:NM_175701:60_cdna 613^705 1 EMBV3_34689 GeneID:281492 20 GENE SMN1 SMN survival motor neuron EMBV3_38348 AGCCAGAGACGACTCCTGCAACGTCAATCCAAATTTGTCCTTCCACACCCTCCCAGAGCA Gene GeneID:100140306|LMTK3:XM_002695196:883_cdna Constitutive 0 NULL GeneID:100140306 18 GENE LMTK3 NULL lemur tyrosine kinase 3 EMBV3_15604 GCCCCACTGGCTATTCGGGACCATGGAGCGGGAACATCTTACTGCTCTCAGAGCCTAAAA Variant GeneID:536213|CHKB:XM_002688006:153_cdna 840^994 1 EMBV3_38921 GeneID:536213 5 GENE CHKB NULL choline kinase beta EMBV3_32743 TACAAATCATCACGTTTCTCAACCCCTCTTCTACCCAGATCCACACAAGATTTGCCAGGG Gene BVV0102_139946 + 0 NULL GK000005.2:102023010-102025876 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193047 TCONS_00193044 TCONS_00193045 TCONS_00193043 1 XLOC_117366 Coding TCONS_00193047 XLOC_117366 Coding Coding FOXJ2 5:102011175-102025161 j TSS144364 4799 1 TCONS_00193047_4 560 0.0523025630339654 11 0.657633178405434 0 4.74108955856709e-11 0.00014865471998411 8.43693417876633e-08 0 2.57796112494283e-11 6.40009519193527e-06 3.85850975590693e-11 4.27463050449576e-05 1.99369315821821e-06 1.3464568446453e-09 1.91193035660951e-25 1.37596426182119e-11 2.34073005284139e-11 2.58378056959925e-06 0.000967181465983296 0.00070726610016755 0.00175243087797537 1.64356237014032e-05 4.49443592893272e-06 7.02153857548079e-05 0.00130734747664086 0.00127853231522486 0.000594953486963501 1.73236145586596e-05 4.4784657608485e-11 6.10361617709295e-06 0.000360359325314827 1.72686044508832e-25 7.85292496022337e-93 XM_005207076.1 FOXJ2 PREDICTED: Bos taurus forkhead box J2 (FOXJ2), transcript variant 0.0 8251 99.93 0.954365492811002 NM_018416.2 FOXJ2 Homo sapiens forkhead box J2 (FOXJ2), mRNA. 0.0 2762 85.35 0.492185872056678 TCONS_00193047_4 sp|Q9P0K8|FOXJ2_HUMAN FOXJ2_HUMAN Forkhead box protein J2; 0.0 922 88.33 0.998214285714286 1 coding 0 0 0 0 -0.181461202107317 0.311049507085452 -0.0028237168887196 0.955135170768758 TGCAAAGCCGATTCTTAACCACTGGACCACCAGCAAAGCCCTCCACGAAGCTTTAAAATATTGTGTTGTAGGGCTTTAAGAAAGGAGAATTGAGGAACAGCTCGACTTGCTGGGTGGTTTGATCTCCCTTTTCGTCCTGCATGAAGCAAGAGGCCTCTGCCATGTTCCATGTGAAGTTGCAGGATAAGTGCCAGTCTGTCATCTGGCAGAATCCAAAAATACCATGGCTTCTGACCTAGAGAGCAGCCTCACCTCCATAGACTGGCTCCCCCAGCTGACCCTCCGGGCCACCATCGAAAAGCTGGGAAGCGCCTCTCAGGCTGGGCCTCCTGGTGGGAGCCGAAAATGTCCACCAGGCTCCCCCACAGATCCGAACGCCACCCTGAGTAAAGACGAGGCTGCCGTTCACCAGGATGGTAAACCCCGGTACAGCTATGCCACCCTCATCACCTATGCCATCAACTCCTCTCCAGCCAAGAAGATGACCCTCAGTGAGATTTACCGCTGGATCTGTGACAACTTCCCCTATTACAAGAATGCAGGCATTGGTTGGAAGAATTCAATTCGGCACAATCTTTCTCTCAACAAGTGTTTCCGGAAGGTGCCCAGACCACGGGATGACCCTGGAAAGGGTTCTTATTGGACAATTGATACTTGCCCTGACATCTCCCGGAAGAGACGACACCCTCCAGATGATGATCTGTCTCAGGATTCACCAGAACAGGACGCCAGCAAGAGTCCACGGGGAGGGGTTCCAGGGAGTGGAGAAGCCTCACTGCCTCCTGAGGGGAACCCTCAGATACCACTTCAGAGCCCCACATCGATTGCCAGCTATAGCCAGGGCACAGGGTCTGTGGACGGCGGAGCTGTGGCAGCGGCAGGTCCAGGTCGAGAGAGCACCGAGGGGCCCCCTCCCCTGTACAACACCAACCATGACTTCAAATTCTCCTACTCGGAGATCAATTTTCAGGATCTAAGCTGGTCCTTCCGCAACCTCTACAAGTCCATGCTGGAGAAGTCCTCCTCGTCTCAGCATGGCTTCTCGTCTCTCCTGGGGGACCTGCCGCCCTCCAACAACTACTACGTGTATCAGCAGCAGCAGCAGCCGCCGCAGCCGCAGCCGCCGCCCCCGCAGTCACAGCCGCAGGCACCCGCCCAGGGCACCTCGGCTGTCGGGGGTGCGCCGCCATTGCACACCCCCAGCCCCGACGGCTGTACCCCACCCGGGGGTAAGCCAACGGGATCCGAGGGCTACGGGCCACCCCCGGTGATGGCCATGCACCCGCCCCCGCTGCAGCACGGAGGCTACCACGCCCATCAGCACCACCCCCATTCCCACCCCGCCCAGCAGCCGCCGCCACAGCAACAGGCACAAGGCCAGGCACCCATCAACAGCACTGGCTTTGCCTTTCCTCCAGACTGGTGCTCCAATATCGATTCCTTAAAGGAAAGCTTTAAGATGGTGAACCGGCTCAACTGGTCCAGCATTGAGCAGTCACAGTTCTCAGAGCTGATGGAGAGCCTGCGGCAGGCAGAGCAGAAGAACTGGAGCCTGGACCAGCATCACATTGCCAATCTGTGTGACTCCCTCAATCACTTCCTCACTCAGACTGGTCATGTGCCCCCCCAGGGAGGCTCCCACCGGCCACCCGCCCCCTCCCGCATCGCGGACTCCTGTGCTCTCACCAGTGGCAAGCAGGAGCCAGCCATGAACCAAGTGAACTCTTATGTGCACCCTCAAGCCCCCCATCTCTACCCTGGCCCATCACCAATGTACCCACTCCCCACCCAGGACTCAGCAGGATACAGTCGCCCAGCACACCACATGGTCCCTCGGCCACCAGTCCCACCTCCTGGGGCCAGTGAGGAGATCCCAGATGACTTCGATTGGGACTTGATTACCTAGTGCATTTGAGAGCCCGGCCATCAGCCCAGGGCTGGGTGGTGACATAGGGCAATGGGGGAAGCCCAGCCCCCGCCCACTCTTCCGCCCTTGCCTGTATATAGATATATATCCTTTTTTTTTCTTTCTCTGCCAGAGAAGCCACCGCAAGATGCTGCCGAAGATAACCCCCTCTTTCCTGCCTCATTCTTCCTCTTCCTTCTAGTTTTTTTCCCTATTCTTTTATTATTATTCTTATTATATTATTATTATTATTATTGGTTATATGCTGTCTCCAGTCTCCTGTCCCCACACCATTGTCCATGTCCACCTCTTGCTAATTTAAAGTCACCTGGCTGGAAGGTGAAGCCATGAGAGCCACAGTGAAAGGTCTCAAATTTTGATTTACCTTTCTCTTTGGGCAATTCAGTGCTAATCCCACCTTTCAGCCCTATGTTGTTTTCCGTGGATATCAGTTCAATCCAGGGCTGAAGAGGCCACATTATTAAGTAGAAGGGATTTAAAATGCTGCTTGGCAGCCATGAATTTGCAGGTTTTACTTAATGGTGCTAATTTTGTCCTCTGAGCTCTTCCTTGTCCCTTTATATCTCCAATCCTACTTCTGCTGGTCCTCATTCCCCATCAAGGGTAAGAGTGATGGTGGTGGAGATAAAATCCTAGTGGAATAAGAGGTCTGGGTTGGGTAGAGTAGAACGCTGTAGAGGGGTGATGAAATATAAAACAGTCAGAAATTGGGTCTCTGCCACTCTTGTCAAATAAACTGCCATTGACTTATTCCTGGCCTGTTCTCTATAGGACATAGAGTCAGTCCTAGCCAGAACTCTCCTTCTCTTCAGGGCTTCCCAGGTGGCACAAGGTGGTAAAGAACCCGCCTGCCAAGGCAGGAGACGTGAGTTCCATCCCTGGGCTGGGAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCGCATGGACAGAGGAGCCTGGTGGGCTACAGTCTATAGGGTTACAGAGTTGGACACGACTGAAGCAACTTAGCACGGATGTGCTGCGTCTCTGGTGGAAATGAGGACAACCCTTCAGCATAGGGTCAGCTTTTTGGAGAGGGTTTCTATTGAACCATTCTGGCTTTTTAAACATCATGTTCTCTGGAAATTAACTGGCTTTTATTTGCATTTACTAGTTTTCCTTTGATCCCCTTATCTCATTTGGCAAATATTATTTCATCCTCTTTCAGTTGTCTGCCCAGCTCTTCCACCCATCAAATTTTCTTCTCCCGTTTTCTGGGATTCTCAAGAAAGAAGAGTAACCCATGATTCCTTTTAGTCTCACCATGTCCTCGGGCAAGACTGGAATCTGTTTCCCATGGATCAAAGCAGAACCAAACCTACAGTACGGGTGGCAGGAGGGTGAGAGAGGAAAGGGGAAGTGGTGTAGACATGCATAGGGAATATTTCAGTTATTTACCTATGTAGGCAAATGCTTCTCTTGGAATCCAGATCACTGGGGCTGAAGCTTTTGCAATCAGGTTTTTTGAAGGATGAAGGAACTTGGGAGAGGGTAATAAATAACTGAATACAAAGAGCTTCATGAGGGCCAAAGAAGGACCCCCCCCTGCCCCCTCCCCCCAAAAAAAGGTACAGGGGAAACTTATCTCCTTTATCAAGGAGTGGCCATGGTTTATGGCTGCAAAGTACTTAGCATATATTGGATATTAATTGTTGAATTCTAGTTCTGAGAAGGAAGAACAGTTTTATTTCCGTTTTTACTTTACTGAATGGTCACTTTCTTAAAGCTGTAGGACAAAATGTGCGAAATGGACAAGGCCATTTTCTCTGTGATTTCTGGTTTTTTCCCTGTCCTTTTATTTACCCATGCTTTCCGCTCTCTTGCTTTTCCCCTCATCCTCCCCTTCCTTTCTTCGTAAAGGGTTCTATACTGAGAGTTTGTTGAAGTGAGGCTGAAGTCAGGGGGGCAAAAAAGGGCAGTTAACTAAACAGCACTTTATTTCTTTGAAGTTCTTAGTAAGACGTGGGGGTGTGAGTAGCTTGAACCCCCTGTCATGTTGGAGGGCAGTTTGTGGGGTTGAAGTATGGCGTAAGATTTCCCATTGGGGAAAGGAGAATTCCTCTTCCAGGGTGGTGACACGCCTTAGGCCAGTGTCCCCCATCTGAGGCATGTCTTCCTTATCCTTCCAGTCAGGGTGCCTCCTACACACAGCATCCCATCTGTTCTTCCTAAGATCTCCTCTCTTACAAATCATCACGTTTCTCAACCCCTCTTCTACCCAGATCCACACAAGATTTGCCAGGGTAGACTAAATCAGACATGGAAATGTCTCCTGTGTATAGTTCATCTGTGTCTTCTGAAAACGAGAACTCTGGCGGGCAGCCAGTCACTGAAGTTTAGGGCTTGGGCTGGAGATGGGCCGTCAGGCCTTCGGGGCCTTTAGCCCCCCTCTCCGCTAAAACCAGCCTCGCTAAATGGCACAGGACAAACCCAACTCTCTTTGGGCCTCAGTTTCCCCTCCCCTCCCTGAAAGGGAGAGAATACTCCTTTTTCTTGTCGATCCAGCATTGCCAGCCTTGAAAGTTTAGTCATTGTTGTCGTCTTGGGTGATGTGTGCAGAACTACAGGAGCTCACTGCCAAAAGAGGAAATAGAGGAGAGCGTAGGGGAGAGGGACGGAAGGAGCAATTCTCTGGTATCCATCCACCCATCCCTGCCTTTCTCTCTTCAACCCCCATGTTTATGGTTTGGTGAGTCCTTCATACCACCCATAATGCTTTGCATTGGCGCAGGCTGGGAAGGGGGGGTGTATGGGCTCACAAGTTGTTGTTGTTGTTGTTTTTTGCATGCTTTCTTAATAAAAAAAAAAAAAAGAATGTTTATGGTT EMBV3_17393 CAGAGAGACGTCCAGACCCTCGCCCTCCAGTCTCCACCACACCCAGGAGCTGCTCTACGA Variant GeneID:527084|CCDC77:NM_001102106:34_cdna 732^880 1 EMBV3_25400 GeneID:527084 5 GENE CCDC77 MGC157228 coiled-coil domain containing 77 EMBV3_23347 AGGCGCAGGAGGAGAGTGTGCTGCCGTCGCTACACCGTCATAAGGTGTACAAGACAGTAA Gene GeneID:281423|PRM1:NM_174156:27_cdna Constitutive 0 NULL GeneID:281423 25 GENE PRM1 NULL protamine 1 EMBV3_00097 TGCCGCACAGACTTCACCCCTCACTGGAAGCAGGAGAAGAATGGAAAGATTCTGTGTGAG Gene GeneID:505039|GATAD2B:XM_002685998:355_cdna Constitutive 0 NULL GeneID:505039 3 GENE GATAD2B NULL GATA zinc finger domain containing 2B EMBV3_29171 TTGCAGAATAGAGATCCCCTATCCAGGCTTTTCCCCTGCCCACCACCGACAGGCCATTTA Gene GeneID:538501|UNC119:NM_001034645:145_cdna Constitutive 1 NULL GeneID:538501 19 GENE UNC119 MGC128474 unc-119 homolog (C. elegans) EMBV3_40954 GAAAAGATCTGGTAGTTGGATTTGTTGCAGTTTGGACGTCACAGACTCAACCCAGAAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09873 CCTGCAGAACACATCAACAGCCCGCCCCATCCTGGGGCTAGTGGTCTGCTTCCTGTACAA Gene BVT0102_130431 - 0 NULL GK000029.2:45198894-45223564 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164006 TCONS_00164005 1 XLOC_100102 Coding TCONS_00164005 XLOC_100102 Coding Coding LOC100848046 29:45200682-45215115 = TSS122815 2017 1 TCONS_00164005_3 593 17 0.861419068736142 0.000128164824587986 2.32137297846997e-22 0 0 0.000119941353281282 0 2.89127807945932e-06 4.10539947041866e-05 5.67852989118996e-19 4.16719225872792e-06 4.42627552280374e-05 0 0 0 8.31207717146396e-06 0.000916616980518753 0 2.48794405338643e-05 7.11048476463059e-05 7.1308131474841e-05 0 0.000592328746773165 9.09673073554187e-06 0.000116044359011252 6.87005488433914e-06 5.2395704200695e-05 1.74293360462049e-05 0 1.20342287230341e-05 7.15388536560382e-05 XM_005197361.1 BBS1 PREDICTED: Bos taurus Bardet-Biedl syndrome 1 (BBS1), transcript 0.0 3622 99.85 0.999504214179474 NM_024649.4 BBS1 Homo sapiens Bardet-Biedl syndrome 1 (BBS1), mRNA. 0.0 2233 87.47 0.895884977689638 TCONS_00164005_3 sp|Q8NFJ9|BBS1_HUMAN BBS1_HUMAN Bardet-Biedl syndrome 1 protein; 0.0 1030 87.56 0.974704890387858 1 coding 0 0 0 0 -0.371948582694281 0.0779489388103649 -0.0433649004029506 0.615469462053387 GGAAAGATGGCTGCTACGTCTTCGTCGGATTCAGACGGCGGCAAAGGCGAGAGCAGTGAGGCCAATTCGAAATGGCTGGACTCGCTCAGCGATTCCATGGCGAACATCCACACCTTTTCCGCCTGCCTGGCGCTGGCCGATTTTCACGGGGACGGGGAGTACAAGCTGGCCATGGGAGACCTTGGCCCAGATGGGCGGCAGCCCCGCCTGAAGGTGCTTAAAGGACACACACTGGTGAGCCAGAAACCGCTACCCGACCTGCCAGCCGCTGCTGTCACCTTCCTCATGGCGTCACACGAGCCCCGGACTCCAGCACTGGCAATCGCATCAGGCCCTTGTGTGTATGTGTATAAGAATCTCAAGCCCTACTTCAAGTTCAGCCTGCCCTCGCTGCCTACAAACCCCCTGGAACAAGACCTTTGGAATCAGGCCAAAGAGGACCAGATTGACCCCTTGACCCTGAAGGAGATGCTGGAGGGCATCAGGGAGAAGGCAGAGGTGCCTTTGTCTGTACAGTCACTCAGGTTTCTGCCGCTGGAGCTGAGTGAAATGGAGGCGTTTGTGAACCAGCACAAATCCAAGTCCATCAGGCGGCAGACAGTCATCACCACCATGACCACCTTAAAGAAGAACCTGGCTGACGAGGACGCTGTGTCCTGCCTGGTGCTGGGCACTGAGAACAAGGAGCTCCTGGTGCTAGACCCGGAGGCCTTCACCATCCTGGCCAAGATGAGCCTCCCCAGCGTCCCTGCCTTCCTGGAGGCTTCTGGCCAGTTTGATGTGGAGTTCCGTCTTGCCGCTGCCTGCCGCAACGGGAGCATCTATATACTGAGAAGAGACTCCAAGCGTCCCAAGTACTGCATCGAGCTGGGCGCCCAGCCTGTGGGGCTTGTCGGTGTACACAAAGTCCTGGTGGTGGGCAGCAACCAAGACAGCCTGCACGGCTTCACCTACAAGGGTAAGAGGCTGTGGACAGTGCAGATGCCTGCAGCCATCCTGGCCATGAACCTCCTGGAGCAGCACTCCCGGGGCCTGCAGGCCGTCATGGCTGCGCTGGCCAACGAAGAGGTCCGCATTTACCATGACAAGGTCCTACTCAACGTCATCCGCACGCCGGAGGCAGTGACCAGCCTTTGCTTTGGCCGCTATGGGCGGGAGGATAATACCCTTATCATGACTACACTAGGTGGTGGCCTGATCATCAAGATCCTCAAGCGCACAGCGGTGTTTGCCGAGGGGGGCGGTGAGGCCGGCCCCCCACCAAGCCAGGCCATAAAACTCAACGTGCCCCGGAAGACCCGGCTGTACGTGGACCAGACACTGCGAGAGCGGGAAGCCGGTACCGCCATGCACCGGACCTTCCAGGCGGACCTCTACCTGCTGCGCCTCCGGGCGGCCCGTGCCTACGTGCAGGCCCTTGAGTCCAGCCTGAGCCCCGTGTCTCTGACGGCCCGGGAGCCGCTCAAGCTGCACGCTGTGGTCCAGGGCCTGGGCCCCACCTTCAAGCTCACCCTTCACCTGCAGAACACATCAACAGCCCGCCCCATCCTGGGGCTAGTGGTCTGCTTCCTGTACAACGAGGTGCTCTATGCTCTTCCCCGGGCCTTCTTCAAGGTCCCATTGCTGGTGCCAGGGCTCAACTACCCCCTGGAGACCTTTGTGAAGAGTCTTAGTGACAAGGGCATCTCAGACATCATCAAGGTGCTGGTGCTTCGAGAAGGCCAGAGCACACCCCTGCTGAGTGCCCACATCAACATGCCCATGAGTGAGGGGCTGGCAGCTGACTGACCCCACGCTGGGGTTAAAGCCCCAGTGGAACCAGAACCAGGAGGATCCAGCCGCCTCCACTGCGCTGGGCAGAGTCCATAGTCCCAGGTTCGCTCCTGTGTGGCACCATGCTGGGCCGCCACCTCCCTCTCCTCTCCTAGCGCCCCTCCCTCACTACCCCGACCACCGGGTGACCCGCGGCACAGGTCAGTGAGCTCCTTCCTCCTCAGGAAAACCCAGGCGCTGGCCC EMBV3_22612 AGAAGTAAATATAGCCTCTACCCCAAACTCTGCCAGGACAACATCCAACGGCCTGGTTCC Gene BVV0102_293312 + 0 NULL GK000023.2:15988076-16162717 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136414 1 XLOC_082627 NonCoding TCONS_00136414 XLOC_082627 NonCoding NonCoding - 23:16122123-16122709 - TSS101704 586 1 0 0 0 0 0 0 0 0 0 0 0 2.6043064921064e-07 0 0 0 0 0 0 0 0 0 0 7.59794508999284e-05 0 0 0 0 0 0 0 0.000112857920788104 NM_145257.3 CCSAP Homo sapiens centriole, cilia and spindle-associated protein (CCSAP), mRNA. 8e-06 55.4 100.00 0.0494880546075085 0 noncoding 0 0 0 0 -0.0111521381612572 0.913889998480319 -0.00850995346671846 0.876229861071674 CTTATTTCTTTGCTCGAGAATGATTTAAACAGCAATAGAATGCCCTGCACCCTCAACATTTGACAAAATTTACCTGTGAAACCAGCTGGTCCTACACTATTTTAAGGAAAAGCTCTTTGATAAGTTTCTCAGTTTCTTCTATGATAACTGGTCTGTTTAAGTTTTATTCTATTCTACTTTCAGGCTTTTTTTTTTTTTTTAAAGAATACATACTCTCATATTACATAAACTATTTCTAAACATAGAAAAAGATTCTACCAGCATCACTGTAAGAAGTAAATATAGCCTCTACCCCAAACTCTGCCAGGACAACATCCAACGGCCTGGTTCCTCATCTCTGCACCCCTTCGTCCTCGTCCCTTTTCATCCCCCTTCTCTCACCACCAAGCAGAGAATTCCTTATTCTTTACCGGCTGATCCATCTGGGAAGCCCCTACACTCGTCCTCATCCTTCCTCGCCCCTCTTCTCTCACCTCCAGATTCACATAAAATGAAAACGGACAGGTTTGCAATTAATCAGAAACACGCTGGCGCTCCTCCTCCACTTCTGGTACCATCAGGGAAGGACTGGAAGTGAACGGCCCAG TCONS_00134237 . 5' 134049 TCONS_00134237 . 5' 134049 EMBV3_10479 GAGGACGCCATGAGCAGCACACACCTGCCCACTCAGCTCCAGGATAGCCTCAGCAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14286 ACCTGGAACATCAACCACGCCCGGCTGATGGAATTTGGTCTCGCGCGGTTCAAAAGCAAC Variant GeneID:523609|PRELID1:NM_001038138:32_cdna 491^604 2 EMBV3_39768 GeneID:523609 7 GENE PRELID1 MGC134414 PX19 PRELI domain containing 1 EMBV3_22423 CTAGGCTGTTCTGGAAAAGGCAGAACGCATGGAGACAGCGAAAAGATCAGCGGTTATCAG Gene GeneID:508039|C16H1orf86:NM_001166564:70_cdna Constitutive 0 NULL GeneID:508039 16 GENE C16H1orf86 NULL chromosome 1 open reading frame 86 ortholog EMBV3_27588 CAACTCGGACTCTCGACAAGGCAATGGTTCTGGGGGAATATGCTTTACCCAAAGGAACTG Gene GeneID:540080|LOC540080:XM_002692506:634_cdna Constitutive 0 NULL GeneID:540080 13 GENE LOC540080 NULL similar to cytochrome P450, family 24, subfamily A, polypeptide 1 EMBV3_04217 ATAGTGTGCTGGGAGAAAATGTTGAAGACCTCAGCTGGTGGCAGGGCGCTGGGAGCTGGA Gene GeneID:100336810|LOC100336810:XM_002690328:2_cdna Constitutive 0 NULL GeneID:100336810 9 GENE LOC100336810 NULL UL16 binding protein 1-like EMBV3_18659 GCACAAGTGCAAAGTCCCCGGTTGCAATATGATGTTTTCCTCTGTGCGAAGCCGGAATCG Gene GeneID:540746|BNC2:XM_002689573:17_cdna Constitutive 0 NULL GeneID:540746 8 GENE BNC2 NULL basonuclin 2 EMBV3_11225 GAGGCACGGTAAAGAACCTATCCCATCTGTCTTTCTTTGGGGCTGACACTGTTGCCTTTG Gene GeneID:505653|MS4A1:NM_001077854:166_cdna Constitutive 0 NULL GeneID:505653 15 GENE MS4A1 CD20 membrane-spanning 4-domains, subfamily A, member 1 EMBV3_39500 CCCGAATGCTCGTTTTCTGGTTTGGCATTGTCAGAGCTTCCTCGAGTGTCGGGTACATCA Gene BVV0102_435836 + 0 NULL GK000011.2:11201806-11202918 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024075 1 XLOC_014430 Coding TCONS_00024075 XLOC_014430 Coding Coding PRADC1 11:11202166-11207069 j TSS17753 1332 3 TCONS_00024075_1 72 0.0960960960960961 5 0.729294165646675 0.000428622245298238 1.98316983680036e-09 5.05089989164865e-07 0.000705002164165864 0.000835262303506774 2.95830978913616e-05 0.000744943914106906 0.0019744081452568 9.16108686824788e-05 0.000622123974854061 7.05719891001054e-05 3.22308205579739e-05 1.14913174289567e-05 0.000830009181877167 1.66560493649539e-05 0.00454932923417346 0.000458083153418981 0.00171724696335571 0.000836704143957444 0.00239900260110506 0.00160063484508243 0.00184979465520794 5.79282124329819e-09 0.000273735552313186 5.86283210611184e-10 0.00194016642326434 8.1312233307162e-10 3.01525727711295e-05 0.000259918444361348 0.000678114403947691 NM_001100338.2 PRADC1 Bos taurus protease-associated domain containing 1 (PRADC1), mRNA. 0.0 1633 99.67 0.684684684684685 NM_032319.1 PRADC1 Homo sapiens protease-associated domain containing 1 (PRADC1), 0.0 1225 88.96 0.6996996996997 TCONS_00024075_3 sp|Q9BSG0|PADC1_HUMAN PADC1_HUMAN Protease-associated domain-containing protein 1; 4e-38 128 100.00 0.983606557377049 0 coding 0 0 0 0 -1.23321687106181 0.0063894256571366 0.00776331880653595 0.914924689575585 CTGAGAGACAGGCCTTTACTAAGCATTTGACGTGAGTGAGCTCGTTGTTACACACTATCGTTTTGGTAGTACCACGATCACGCCCACTTTACAGACGAGGGAACTGAGGCTGAGGGGTTAGGTGTCCAACATCACACGTGGGCACCTGGCCCGAATGCTCGTTTTCTGGTTTGGCATTGTCAGAGCTTCCTCGAGTGTCGGGTACATCAGGCCTACTGGTACACCCCCAGAGCCTACTGACTACGACCGCACAAACGCCAGTGGAACTAGGCAGAGGATGAGCAGAGCAGGGGTCGCCCGAGACCACCTGGGCGCTAGACGAATGCCTTCCCAAGAAGAGGATGGGAAAAAGGAAAGCACAGCTAGAAGATAAATCGTTGTCTTGCGAAGCTGCCGCCGCTTACGCATCCATGATTATTTGTACTTTCAAGTGCTGAGTCCTGGGGACATTCGCTACATCTTCACAGCCACGCCTGCCAAGGACTTTGGTGGTATCTTTCACACAAGGTATGAGCAGATTCACCTTGTCCCTGCGGAACCTTCAGAGGCCTGTGGGGAACTCAGCAACGGTTTCTTCATCCAGGACCAGATCGCGCTGGTGGAGAGGGGGGGCTGCTCCTTCCTGTCCAAGACCCGGGTGGTGCAGGAGCACGGCGGGCGGGCAGTGATCATCTCTGACAACGCGGTTGACAATGACAGCTTCTACGTGGAGATGATCCAAGACAGTACCCAGCGCACAGCTGACATCCCCGCCCTCTTCCTGCTCGGCCGAGATGGCTACATGATCCGCCGCTCCCTGGAACAGCATGGGCTGCCTTGGGCCATCATTTCCATCCCAGTCAATGTCACCAGCATCCCCACCTTTGAGCTGCTGCAACCGCCCTGGACCTTCTGGTAGAAGAGTTGGTCCCACATTCCAGCCATAAGCAACTCTAGGCTGAGAAGGGAAAATCCAGGAATTCTGCTGTTCAGGATTTGGGGATAGCATTTGGGAACTGGTGGAGCCAGGCAGAGGAAAAGGGCTTGGGCCTTGGCTCAGCTAAAGGAAGCCACACCACTGGCCTTTCCTCCCCTGGGCTCCTAAGGTGTCTCATGCTATGGGAAGAGGCAAGAGCCAGGCCCGGGGGCTGGTGGGCTCGGGTCTGAAACTAAAGGGGCCAACAGCAGATGGTTTGAGAGCCATCTGAAAGCTGTCACACCCCACCTGGCTCCAGCCTCCCCACCCAGAGTCTTTCACAGCAATTGCTGGAATGGTGTAAGGAGCTGGTGTTTGAGGACTTAATAAACCCTCAGTGACTTTTTAGCAATAAAGCCTCTCATCAGGGTTGCAAC EMBV3_31066 TACCTTGGCACCAAATCCCTGCAAAGAAATAGTGTCCCCTTCAGAATGAGGCTGGTGCTG Gene GeneID:531535|SLC13A4:NM_001076884:20_cdna Constitutive 0 NULL GeneID:531535 4 GENE SLC13A4 MGC139383 solute carrier family 13 (sodium/sulfate symporters), member 4 EMBV3_33827 GAAAAAACAGTCACTTCTCTTGGAGTCGTGGCAGATGGAGTGGCCCCAGTCTTCAAAAAG Gene GeneID:506275|WBP4:NM_001075251:44_cdna Constitutive 1 NULL GeneID:506275 12 GENE WBP4 MGC139635 WW domain binding protein 4 (formin binding protein 21) EMBV3_26816 GGGGGCGGGGCTCATTAAAGTGCCGTCACACACAGGCCTGGCTGGGCACCACCGTCTCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36773 TCCTACCTCAGGAGGCTGAGGAGGAGCGATGGTCTGACAATGAATCTGATGATGAAATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27918 GACTCTGGTTTTGACCCCTACCCTGGATGACAGCTGGTGTAAAGAGAGAACCCAGGACAA Gene GeneID:514031|ITGB7:NM_001105365:33_cdna Constitutive 0 NULL GeneID:514031 5 GENE ITGB7 NULL integrin, beta 7 EMBV3_02032 TGGGACAGCGTGCCCATGTGTGTTAGATGTTAGAGCAAAAGAGAGCCTTATAGTTTGGCA Gene GeneID:617419|SCD5:NM_001076945:28_cdna Constitutive 0 NULL GeneID:617419 6 GENE SCD5 NULL stearoyl-CoA desaturase 5 EMBV3_20885 ATGACATCGCCAAGGCAACTGGTGATTGGAAGGGTCTGAGGATTACAGTGAAACTGACCA Gene GeneID:784354|LOC784354:XR_083996:42_cdna Constitutive 0 NULL GeneID:784354 20 PSEUDO LOC784354 NULL similar to 60S ribosomal protein L12 EMBV3_39087 GAGCTCCTACTGTCCCTCTGCATTTAGCTGGGGTTCCCTGAAGTCCAGAACATTGTGACT Gene BVT0102_096077 - 0 NULL GK000007.2:68141497-68656480 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221966 1 XLOC_135275 NonCoding TCONS_00221966 XLOC_135275 NonCoding NonCoding - 7:68226530-68227311 - TSS165964 781 2 TCONS_00221966_2 42 0.179257362355954 1 0 0.000139366979516457 0 1.18489015186451e-05 0 0 0 0 0 0 2.6341179199173e-05 0 0 0 0 0 0 0 0 2.75452787494497e-05 0.000475744727351064 7.77395323591632e-06 0 0 4.29313283783994e-05 0 0 0.000420119015708694 0 0 0 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 5e-41 172 87.14 0.17797695262484 0 noncoding 0 0 0 0 -0.0616837195667628 0.573676382294247 0.00824039010210237 0.856118723364656 AAAAAATTGAAATTGCTCAATCGTGTGCAACTTTGTGCAACCCCAAGGACTGCAGCCCACCAGGCTCCTCTGTCCATGGAATTCTCTAGGCAGGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGCTCTTCCTGGGGATCTATAGGCAGAGATCACTATTATAATTTTAATGGCTGTACACTGAACAGTCTTCTAAGGACTGGTGACAAAATCTGCCTATTGGATTCAGTTCACTTTTCAGAAGGAACATGCCAGGCTGTGGGAGCAGCATTCTGGAGTCTTCGTTTTGGTCTCTGCTGGAGTCTGGATCTCTTAACACCTCCACATGACCTAGCATGAAGAAGGTCAAAAGTCACAATGTTCTGGACTTCAGGGAACCCCAGCTAAATGCAGAGGGACAGTAGGAGCTCCTCTCAAGGAGAACCCCAAATCAGTTCTGATCCAAGGACAAATCTGAGACTAGGGAATAACCAAGGAATCTGTAGTGATGGAGCTGCAGATCAAGTCACAGAATGAAAAATATTGAGTGAAGGAAGTGCCCCAGGACTCAAGAGATAATGAATTCAGCTCTCTGCATCCTCTTTTTCCAGCAGGCACTCTGGATGCTTTAACCAGGTCTCCCTGAGAACAGCTCTTCATGACCCTTTCAAATGCTGGAAGCTACTGTGGGGAGGAAGGCATTCATTTATCCATTCATCCCTTTAGTCTGTGAATGTTTTCTGAGCTCCTATTGTGTACCAAACACTTTTCTGGGTCCAGAATGTTATGGTGAACAG TCONS_00214047 . 3' 70631 TCONS_00214047 . 3' 71411 EMBV3_12954 CCTCCAAGTCCTCTGCTTTACGATGCTTCTGGAATGTGGATGTACCACAGAGAGCTGTAC Gene BVT0102_169786 + 0 NULL GK000026.2:20583928-20613537 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00286 CGCTCAGAAGCTGCCTCATGAGATCTTAGATTTGAGATATGTGTAACTTAAACCCTGCTG Gene BVV0102_437609 - 1 EMBV3_19711 GK000005.2:23364473-23370701 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194130 1 XLOC_117679 Coding TCONS_00194130 XLOC_117679 Coding Coding UBE2N 5:23368837-23374770 j TSS144936 3334 1 TCONS_00194130_2 152 0.0473905218956209 6 0.438975050573163 6.17422326452385e-112 3.55073860447206e-05 1.38532163981915e-53 4.38399936032386e-77 6.15145399505046e-05 1.56005233738008e-83 2.78322489208589e-05 0.000166197864746978 3.708482185935e-05 4.89133355399446e-40 3.56880917434953e-55 6.98061285712564e-60 2.07273163397831e-58 5.13143408996283e-05 0.000179085304813392 0.000349211173810998 0.00142707249072801 1.2242141714529e-46 1.36170542146666e-05 5.27713907804325e-05 6.8584992111301e-06 0.000175925901388692 0.000180936091745157 0.000290120368867962 0.000206640234107456 0.000168461252971109 5.7504118059487e-05 3.75832907859274e-05 6.1966628608423e-05 3.67962079695772e-05 NM_001076258.1 UBE2N Bos taurus ubiquitin-conjugating enzyme E2N (UBE2N), mRNA. 0.0 3846 99.81 0.64247150569886 NM_003348.3 UBE2N Homo sapiens ubiquitin-conjugating enzyme E2N (UBE2N), mRNA. 0.0 2782 89.01 0.647570485902819 TCONS_00194130_2 sp|Q0P5K3|UBE2N_BOVIN UBE2N_BOVIN Ubiquitin-conjugating enzyme E2 N; 2e-103 297 95.39 0.993421052631579 1 coding 0 0 0 0 -0.216633514556918 0.300301279493278 -0.00358943190024617 0.938818004078593 TTTTTTTTTTTTGAGAAATTACATTAGGTTTGTACAGTTGGGGAAAATCCAATAGAGGGGAAACGGTGATTCAGGAGAGGAAGGCGATGCTAGAACAATGTCCTTGAGGAGACATTTGTAGCTGCAGTTGTACATGATGTCATCAGTATTTGCTGGTGGTTGCTTTCAGCTGCTTATGATGATTTATGTTTTCTTTGAACTTTACATTTTATAAGGAAACCCAGCGTTTGCTGGCAGAACCAGTTCCCGGCATTAAAGCAGAACCAGATGAGAGCAACGCCCGTTATTTTCATGTGGTCATTGCCGGCCCTCAGGATTCCCCCTTTGAGGGAGGGACTTTTAAACTTGAACTATTCCTTCCAGAAGAATACCCAATGGCAGCCCCTAAAGTACGTTTCATGACCAAAATTTATCATCCTAATGTAGACAAGTTGGGAAGAATATGTTTAGATATTTTGAAAGATAAGTGGTCCCCAGCACTGCAGATCCGCACAGTTCTGCTATCGATCCAGGCTTTGTTAAGTGCTCCCAATCCAGATGATCCATTAGCAAATGATGTAGCGGAGCAATGGAAGACCAATGAAGCCCAAGCCATAGAAACAGCTAGAGCATGGACTAGGCTATATGCCATGAATAATATTTAAATCGATTCGATCGTCAAGTGTGCATCACTTCTCCTGTTCTGCCAAGACTTCTTCCTTTTTTGTTTGCATTTAATGGACACAGTCTTAGAAACATTACAGAATAAAAACCCAGACATCTTCAATCCTTTGGTGATTAAATGCACATTAGCAAATCTATGTCTTGTCCTGATTCACTGTTGTAAAGCATGAGCAGAGGCTAGAAGTATCATCTGGATTGTTGCGAAACATTTAAAAGCAGTGGCCCCTCTCTGCTTTTATTCGTTTCCCTCATCATGGTTTAAGTATAAAGCACTGTGAATGAAGGTAGTTGTCAGGGTTAGCTGCAGGGGTGTGGGTGTTTTTCTTTATTTTATTATTATTATTTTTTTTTTGGTGGGGGGGAAGGTAGTTTTATTTTAATTTTATGGGCTCCTTTCCCCCTTTTTATGGTGATCTAATTGCATTGGTTAAAAGCAGCTAACCAGTTCTTTAGAATATGCTCTCTAGCCAAGTCTAACTTTATTTAGACGCTGTAGATGGACAAGCTTGATTGTTCGAACCAAAATGGGAACATTAAACAGACATCACAGCCCTCACTAATAACATTGTGACCTTGCTGTCAAGTGTAGAATCCTCCCTTCAAGAAAAAGCTTGTGACCATTTTGTATGGCTTGTCTGGAAACTCCTGTAAATCTTATGTTTTAGTAAAATATTTTTTGTTATTCTACTTTGCCTTTGTACAGTTTCTTTTACTGTGTTTATTTCATTTTCCCAATGTGACAATCGTATTTAAAAATTATAAAACTGATGGAACATTCTATTTTGATCTTCACCATCTGACAAATTGAATGGCGAGAGGTAGATTTTGCCAATTTCTTTTCACTGATGCAGATTTGTGTTAAGATATATCACTGAATGAAGTATTTATAAGCTGGCCCTGAGCATGCCTAAAACATCAGTATGTGACATTTTTTTTTTTACCTCCTAGAAATTTGAAATAAATGTGTGTGTGTTGTCTGATTAGTTAGGCGATCATCGGTGTCTTGCCACAGTGTTTGGAAATTACTGTTCAGGAGAGTCACAGCACAGCCACACCAGTGACTGACTTTGTGTGGGACTTCTACTTGTGCCACAGTTGTGTCTGGCATTTGAGTTATGACCTTGCTCTTAGTTCTTGTCTCAAAACTTCGTGTGTGACCACTGTTATTAGAAAACAGCAATCTCGTAATCATTTGGGGTTTGCTGAGGCATTTATCAGTCTTTCTTGCAGAAGTGCTGAGCAGATCTCAAGCAGTGAGCTTGCATAAGCGTCATCAGAAAGGTTTCTTCCTTAGAGGGCATCAGATCCTCAGTTAATGATTCTTACTGTCATCCCTGTAATATTTGGTGCGGGAGCTCCTTTTATTCTTTGATAATCTGCAATTATCTGCATTGACAGAGTTCTTCCCCACCACAAAGCTGTTCTTTCCCACCTTTCCATATCTAATTCCCAAGTCTTGTTATTTTAAGACATTAATGTAGTCAGTTATAAATAAGTATGTAAATGTTAACCTGTGGGTTGGAACCTTTGTCTCTTGCAGTTTAAGGTAATGGATATTGTAGCCCATCTGGATTTTCCCCACTCTTATTCTCATACCTTCTGGAGTTTCTTCAGAATGTGGTGTATTTTATTGTGCTCCTATGTAAGATGAAGAATATCTATTAAAATTACATTTTCAACATACAAAAGTTTTTGATGACTGGTAACTGCTTATGGATGCACTCCTACTTGTCAGGGGTGATTAGGTACCTGAATGGGACTGGCATAGGATGTTCCCTCGTGGACCTCCTCATCTAATGAGGGATGCGGCTGGGGCACATGGACAAAGAGCAGTGGCAGCTCTGATGGAGAGGGGAAGTAAGCGCTTGGGAGGGACTGCTCTTCTGGATTCAATACCTCCAGGCAGGGGACCAGCTTGTGCAGAGCCCTGGGAGCAGAGAAGAATCTGAGTATATTGATAAATGGCTTCTTGAACATCAACTGCCCATTCAGAAGCTTTTCTGAAATCTGGAGGGGTTGATATGAGCCTTATGTTTTTCATGTGATTTTTGAATTTTGTCTCCTTTGCTGTGATTCGCTTCCATGCTAGTGTTGGTCCGCTCAGAAGCTGCCTCATGAGATCTTAGATTTGAGATATGTGTAACTTAAACCCTGCTGTAGACCAAGAGCATACTTTAATACAAAATTTCAGAAGCATTTAAAAATAAACACAATACCTAAAAAAGCCATAGGTGCTATGGTTTAGCACTCGTAAAGGAGAGTATGGGGTGGGAAATCCTGTAAAACATTAACAGTTTTAGCTAAATGGAACTACATGGTATGGGAATAATAGGAATTGGCTACTTAACTCGAGCCATACCAACTTTTTGTTAGTTGCAGTTGCAAAGGTTTAAAAATAACAGCCTTACCTACAAAAGCTGGCCAAAAGAAAAAGGTAAAATGCCATGATTATAGGGCAGCTAATTCAACAGTCTATTTTAAAAAATGTAATTTCATTGGAATAATGTATTTTGGGACTGGGGGCAACATTTCATTTAACCGTGCAGCATGCGCTTAGTTTAAGAAATTATATTGGGGGTTATTTTTAAATGACTTAATAAGATCACAAAAACAAAACATGTTGAATGTAATAACTTGGAATATTAAGAATAAAAATCTGTACACCACCACC EMBV3_42856 GGTCAGTACACAACTGCTTTCCAGACCCAGAGACCCCTGCACACTTCAAAAATCCTTCTC Gene BVV0102_120804 + 0 NULL GK000020.2:4356156-4449105 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06218 TGCTGGCGTGGGTTGTTGTGGCTGACCAAGTGACTCGTGGGGATGTGTTCCATCTGCCAG Variant GeneID:507525|VTN:NM_001035050:73_cdna 163^282 1 EMBV3_05195 GeneID:507525 19 GENE VTN MGC128203 vitronectin EMBV3_06848 TTCAGTTTGTGGTTGGCCAGAGAGAGCAGAGTAAGAGAACAGTGAACATTCGGACTCGAG Gene GeneID:511740|TARS2:NM_001101945:88_cdna Constitutive 2 NULL GeneID:511740 3 GENE TARS2 TARSL1 threonyl-tRNA synthetase 2, mitochondrial (putative) EMBV3_38693 CCTTTTCCCCTATCCTCCTCCAACCTGGATTGACTACTGCAAAACAAATGTAATCACCAC Gene BVT0102_122041 - 0 NULL GK000002.2:125462745-125468088 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106580 TCONS_00106578 1 XLOC_062838 Coding TCONS_00106580 XLOC_062838 Coding Coding RCC1 2:125464987-125486727 j TSS78418 4998 1 TCONS_00106580_3 422 0.230492196878751 11 0.770596623579741 0.000136401703211862 0.000395456264906125 2.43343670761939e-07 2.01111923928126e-08 4.41642053821465e-07 4.9874168113979e-05 7.64257090227079e-05 5.06168262926363e-05 3.82491309262832e-07 3.55943504983842e-14 1.92618831750732e-05 1.00981000787587e-08 7.55083164694441e-09 7.7397970806952e-05 1.21159132799305e-05 0.00302333459863884 0.00305062104059824 0.000843049530589601 1.55375056925173e-08 5.32058281634131e-100 3.78727250229409e-08 0.00117288282533105 0.00247741702534186 0.00147807023324043 0.000176910245562009 2.04976115122691e-06 0.000162036710076368 0.000682522668714538 0.000583249295598905 0.00156857378939725 XM_005203208.1 RCC1 PREDICTED: Bos taurus regulator of chromosome condensation 1 (RCC1), transcript variant X6, mRNA. 0.0 8789 100.00 0.974789915966387 NM_001048199.2 RCC1 Homo sapiens regulator of chromosome condensation 1 (RCC1), 0.0 2461 82.91 0.482392957182873 TCONS_00106580_3 sp|P18754|RCC1_HUMAN RCC1_HUMAN Regulator of chromosome condensation; 0.0 827 95.25 0.995260663507109 2 coding 0 0 0 0 -0.322033011471989 0.124026998230478 NA NA GATCGAGGAGCTCGAGGGTAGGCTGCCGAGGGTCTGCGTAGGGAGCGAAATCTCAGCGTCAATAGGCACCGCCACGACTGTTGACCGGTGGGAGAGGTATACCTGGATTCCATTCCTGGCTCTCTTTTCCGGCTGTGCCAACTTAAGCAAGTAAATCTACTTCTCTGCGCCCCAGTTCCCTCAGCTGTTAAATAAGAGTGACAGAGCCCTCTTCAGCTTGTTGTGAGAAGTTAAAGGTTGTTAGAAGGACAAGAAGATGCCACCCAAGCGTATAGCTAAGAGAAGGTCTCCCCCAGAAGATGCCCTCCCCAAAAGCAAGAAGGTGAAGGTCTCCCATAGGTCCCACGGCACAGAACCAGGTGTGGTGCTGACACTGGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGCGAGAATGTGATGGAGAGGAAGAAGCCAGCCCTAGTGTCCATTCCAGAAGACATCGTGCAGGCTGAGGCTGGGGGCATGCACACTGTGTGCCTAAGCAAAAGTGGCCAGGTCTACTCCTTCGGCTGCAATGACGAGGGTGCTCTGGGAAGGGATACGTCAGTGGAGGGCTCAGAGATGGTCCCTGGGAAAGTGGACCTGCAAGAGAAGGTGATACAGGTGTCAGCAGGAGACAGTCACACAGCAGCCCTCACCGAGGATGGCCGTGTCTTCCTCTGGGGCTCTTTCCGGGACAATAACGGTGTGATCGGGCTCTTGGAACCCATGAAAAAGAGCATGGTGCCCGTGCAGGTGCAGCTGAGTGTGCCCGTGGTGAAGGTGGCCTCGGGAAATGACCACTTGGTGATGCTGACAGTTGATGGCGACCTCTATACTTTGGGCTCCGGGGAGCAGGGCCAACTGGGCCGCGTACCTGAATTATTTGCCAATCGTGGTGGCCGTCAGGGCCTTGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGGGGCCATGTCAGGTTCCAGGATGCCTTCTGCGGTGCCTACTTTACCTTCGCCATCTCCTCCGAGGGCCATGTATATGGCTTTGGCCTCTCCAACTACCATCAACTTGGAACCCAAGGCACAGAATCCTGTTTTGTACCTCAGAACCTAACATCCTTCAAGAACTCCACCAAGTCCTGGGTGGGCTTCTCCGGGGGCCAGCACCATACTGTCTGCATGGATTCAGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTATGGGCGGCTGGGCCTTGGGGAAGGTGCTGAGGAGAAGAGCGTACCCACCCTGATCCCCAGGCTGCCCACGGTCTCCTCAGTGGCTTGTGGAGCTTCTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACCAACTGGGCACGGGACAGGACGAAGATGCCTGGAGCCCCGTGGAGATGACAGGCAAACAGCTGGAGAACCGGGTGGTCTTAACTGTGTCCAGCGGGGGCCAGCACACAGTCTTACTAGTCAAGGACAAGGAACAGAGCTGGTGAAGCCTGTGAGGGCCTGGTTCCTGGCCCCCCCAACCTCCCTCTTGGAACAGGGAAGCCGTGACGACTGCGTGTTCCAGCAGGCCTCTCCCAGCCCCAAGTACTCTGTCACCTCCTGCCTTTTCCTCATCAGCAGAACAGAACCCTTCTCCCCTTTATGCCCCCCTCTTTTCTGGAATCATCCTGGGACCTACAGGATGAGGGTGGGATAGATGGAAGAGAGGGGAGGGGTTTTTATCAGAAAGAACATTGCTCACCCCACAGCCATATGGTCAGACCTTCCTGCTCATCCCTACTTCTGTGGCACTGGCTGACCCTGGTTTTGCCTCTCCAAAACCAAAACTTCCTCCCCTGCGTGTTTGGTGCCCAGATAACGCTGAGAAGTCAGGCTCCATCAAGCCCCGCTCTAGTCCTGTGCCACTCTTCCCGTCCTTCACAACCCACAGGCGGACACACGGTACAGTCGTCAGACCCAGCTGTCATGGACCTATGCCTGGGGGAAACTGGAGAAGGGGAAGGCTACCCAGCCATGGGCAATCCCAAGCCAAATATTTGGCCCTGAACAGGTGCCCATGGGGCAAAAAGAAAAACAGGGCTCCTCTGTTTGATCAAGAAAAAAGCCAATCCACCTTTCTCCCAGAAGCACAAAGCATTCTGTCCTTCAGGCCTTGTCTGCAGTCTCCCCCATCCATCCTGCCTCACCTGCAGCCAAGGGCCTGAAATCTGGAAAGGCAGCTGTGCCTGCAGGGCAGGACTTGTGGGGAGAGGGGAAGGAGGGCTTTATAAACAAACTTAAAGCAATATTGAGAGTGAAGGGAGGGAGGGGAAGAGGGTTGGAGGGGTAGAGGCTGGTCTCCAGAAAGGGAAACAGCAGCATGTACAGTGGCAGAAAAAACAGGAAAGGGTTTTGATTTTCTTTTTTTTAAATGTAAAGTATTTTGGAGGAGAGAGTGAAATCTTTTAACACTTTGAATAAATTTAGAGTTTTATAAAACAGGCCACTTATTTTCTACACACTCCCTGCTTTTTTAAGGGAGCACCTGCTGTGTTGGGAAGGGCAGAATGACCCCATGCCTGTAGACCTGGGGAAGACTAGGACTTCAGTGATGTCAAGAACTCCTGGTATGTGCCAGCTGTTCATTTTTTGTTATTTGTTGTTTTGTTTTTGTTTTTTTTTTTTTGTATGAAACAGTGGCTGTTCTAGACAAATCAAAATGAGTTGATTGGTTTTTCTTAGGTATTTATGTTTCAAGAATCACTGGATTTTTAAAAAATTATATTGTACAGTATGTGAGACATGGGGTGGATCTTTTTAATATCCTAATTTGAAACCAAGATTTTTGAGTACAATACATCTCTAGAGATACTTACACTAAGTTTAACGATGTATCATTTCAAAAGCTAGTGTAACTGATTAAACATGATTAACTGCACAATAACAACTTATGCATAATGGTGTAGATTTTCACAGGCATTTGAGCAACCAAGTCACATAAAGCTGACCTGTCCAGTATGGTGGTCAATAGCTACTTGTGGTTATTTAGATTTAATTTAAATTTGTAAAAATGTAAAATGAACTTCCTCAATTTTATTAGCCATATTGCAAGTCCTCAGTAGTCAAAGCAGCTAGTGCCTATGGTTTGGGGGCTATGCAAATACAGAAATTTATAGAACATTTCTATAATTGCAGAAAGTCACAGTGGACAGTGCTAATATAGGAGGTCTAAATATGTACAGCAGGGAAGTTTTATTAGCGCCAGGAGGATTCTTGATGTCAGCTACTCTTGGAAAAATGAATATGATGTAAAGTAACTTAAAATGTTTTCTGTGATTGTTTTTTCCTCGAACTTTTAGTTTCAATGCAGGTCCTATCCTGATTAGAAATGGACTTCTAGAAGGGAAAAAAATCACAACTTTCGACTTTAATATTTTCACTGTAGAGAGGCACTGTGTGTCTGCTCTTCCTTCCCCTGCCCCCCAAAAAAGTCCATTTGGATTAGATTTATTGAAGCTTTCCCTTTTGACACAGCAGATTGGAAGTACTTTCTCCTTAAAAACAACTCTTGTGGATTGAGACTTAAATGGCCCAGGCACTGTACTGAGCACTTTGCATACAATAATAGCTCATTTCATCCTCACATCAGCCTTGTGAACTGCTGTCCCTCAGGAAAATGTCCCTGGGAGTTCAAGTGACTAACTTGAGATCTAGCTGCCTTTCTTTTCCTTGTATTGTAGTGAAAGTCACTCAGTCGTGTCCGACTCTTTGGGACCCCGTAGGCTATACAGTCTGTGGAATTCTCCAGGCCAGAATACTGGAGTGGGTAGCCTTTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAATCCAGGTTTCCCACATTGCAGGTGGATTCTTTATCTAGCTGAGCCACAAGGGAAGCCAAAGAGTACTAGAGTGGGTAGCCTATCCTTTCTCCATCAGATCTTCCCAACCCAGGAATTAAGCTGGGGTATCCTGCATTGCAGGTGGATTCTTTATCAACTGAGCTATCAGTGAAGCCCTGATATGTATTGTATGTAACAGTTATAAAGCTCTCTGTAGGTGCTTTATGTATATTAGAAAAGTATCAGGCACAAAGTAAAGGCTCCACAAGCCTTTGCTGTTACAACCGTTGCACATTTCAAAATTCCCTGTGGTTCATAATTGCCTTGTTTTTTCACTTGCTTACTTTTTTGGTATAAGTGTTGTTCAATAATTCAGTGTCATAGTCTATCAGAAGTATGAATCTCCTTTTTTACGTTCAAACGTGTCAAGTACTCTTAAGTTTTACCTTTTCCCCTATCCTCCTCCAACCTGGATTGACTACTGCAAAACAAATGTAATCACCACATATGGCTCAGCTGTAAATACTATTTACAATCATAATAATGTAGTACAATTAACAAATTGCAATCAGAAGACGGAAAAGTGTGTATGTCTGAGGGGACGTCCCTAAAATATCTGAAACTACAAATGAATAGAAATTATATTATTGAGGGCTTCCCTGGCGGCTCAGTGGTAAAGAACCTGTCTGCCAATGCAGGAGACACCGGTTTGATCCCTGTTGCTGGAAGATCCCTCGTACTGCAGAGCAACTAAGCCCCCGCCACAACTATCGAGCCTGTGCTCTAGAGTCCTGCGGCCCCAACTACTGAAGCCCTCGTGCCCTAGGGCCTGTGCTCCACAACAAGAGAAGCTACCACAGTGAGAAGCCTGTGCGCTACAACTAGAGCGTAGCCTCCACTCTCCACAACTGGAGAAAAGCCGGCACAGCAACGAAGACCCAGGACAGTCAAATTGTCTTAAAAGTATATTATTTAGAAATACACATATTTTAGGGAAAAGGTTGGGATAAGGGATAGGTAGGGTAAGGGACAGCTGTTTATTGTTTGACATAAAATTAATTTTTTTCCGGTGTCTCAGTTCAGTCGCTCAGTTGTGTCTGACTCTGCAA EMBV3_11053 CAGCCTCCCCAGAGTCTGTTCTTGGTTTTGTCCAATCAGCTCTTTGTTCAGAGTGAGACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02769 GAGCTCACAGCAGGCACCTTGGGAGTCACAGCAGGGAATAGTTAAGCCAGTTTGGTCTCC Gene BVT0102_152948 + 0 NULL GK000017.2:45930840-46007559 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077128 TCONS_00077131 TCONS_00077132 TCONS_00077134 TCONS_00077130 TCONS_00077129 TCONS_00077133 TCONS_00075333 2 XLOC_046992 XLOC_046553 Coding TCONS_00075333 XLOC_046553 NonCoding NonCoding - 17:46006513-46007470 - TSS56835 791 1 TCONS_00075333_2 95 2 0.174686192468619 0.000294936887208114 6.80723315287569e-24 2.13713068486146e-127 0.000143073045113904 6.48812733299806e-05 9.74880607397693e-05 0.000190263333120064 0.00035255845774038 0.00031415534993669 0 0 8.41374151819682e-05 2.35571854273953e-57 0.000127661306418047 4.39280822796305e-05 0.00194997336003903 0.00121433956952199 0.00602591924003209 0.00063488852022468 2.34927271941783e-05 0.000130945907699913 0.000702898488299543 0.00142670800492571 0.00463419127503523 2.85569943296241e-321 3.1261453464982e-07 0.000229188353244824 0.000685169494392632 0.00152469973619972 0.000750719523558056 0 noncoding 0 0 1 1 0.0560947703102762 0.588301825395566 0.0305508142835397 0.559988514935105 GTGTTCGCATTTCATAATTTATTTAAATTTTTACATACTGCTATTTTTCAGGAAAAGCGAGAGGACTCAGGCCCGTCCAGCACTGCCCCCTGGTGTCCCTGATGAGGCCATGGCAGCCTCTGGCTCACTGGACACTCCTGGTGCCAGGCTGTCCGGGACCCTGGAAACCACTCACCACGAACGTGCATGAGGGCCCCCAGCCCCGAGGCAGGCCCTGCACCCCAGGGACAAGGCGATCTCCAGGGCGGGGAGGAGCGTCCCTGGTTCTCTCAGGACAGTGGGGCCGTGCCGTGTGCTGCTCCCAACGGGGTGCTGAGTGCACACTAGGACCCTGGGCTGGCAGTGAGGGTCCCCGGAGACCAAACTGGCTTAACTATTCCCTGCTGTGACTCCCAAGGTGCCTGCTGTGAGCTCACACCCTGCTCCTCTGGGTAGGGGTGCAGGTGGAGTTGGGGAGGGGTGTGCCCAGAACATGGTGGGGACAGGAGACTAAAAAAAAAAAACCACCCTGGAAACACAAGCAGCTGCTGGCCTGCGGCCAAGGCGCCTGCTCTGCTCAGGGCGTGGAGGGGCTGGAGGGATGAACCAGCATGCTTGTAACTGCAGCCCTGGGGGCAGGGACTGCTCCTGTACCCCCTGCCCCCATAAACCCCCACCTATGTCCCCACCAGGCTGCAGAGAATGGAGGGTCCCTGGGTAGCATGTTCCAGCGAGGCCAGCAACACACTGCAGTCATGAGGGCACGCTGCCAGCACTGATCCCAGCCCCATAGGCTAAGGAAGAGGGGGTGG TCONS_00077134 TCONS_00077134 r 5' 0 TCONS_00077134 TCONS_00077134 r 5' 0 EMBV3_12936 CGGCCCCATGAGGAGGGACGTGAACGGAGTGACCAAGAGCAGGTTTGAGTTTAATCTTTT Gene BVT0102_148561 + 0 NULL GK000019.2:40396243-40495178 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19198 GAAAACGGATTTGTGCAGGAGAGAGCCTGGCCCGCATGGAGGTGTTTTTATTCCTGACAG Gene GeneID:505468|LOC505468:XM_002698396:306_cdna Constitutive 0 NULL GeneID:505468 26 GENE LOC505468 NULL similar to cytochrome P450 2C92 EMBV3_40224 GGCCTAAACTTTACTGTTGGCCACTGCTGGGTCTGTCTCATATTTCAAAAGAATATTGGG Gene BVV0102_202399 + 0 NULL GK000011.2:57256013-58431215 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43169 CCCCCTAAAAGACAAACATCTACTACAACATGGCCAGATTTTGAGAGGGAAAGTCCAGGA Gene BVT0102_119002 - 0 NULL GK000003.2:30319288-30361356 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40966 TTCCTCAAGCGAGTTCTCGGAAGAAACTGGGGCTTCTAGTACCAGGAAAAGGAAGCAACC Gene GeneID:513716|MGC143285:NM_001083423:74_cdna Constitutive 0 NULL GeneID:513716 15 GENE MGC143285 NULL hypothetical LOC513716 EMBV3_03686 GCTGGGAGAAGCGTATGAGCCGCAGCTCAGGCTACATCCAGAAGATTAAGTCTGGAGAGG Variant GeneID:535470|PIN1:NM_001034632:5_cdna 74^286 2 EMBV3_23010 GeneID:535470 7 GENE PIN1 MGC137201 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 EMBV3_42749 TCCTCGGCGTATAGATTTATTAATGCTCCTCGGCTCTCCCCCGGGAGGGGGCAGATGCAT Gene GeneID:100299478|LOC100299478:XM_002698697:78_cdna Constitutive 0 NULL GeneID:100299478 27 GENE LOC100299478 NULL hypothetical protein LOC100299478 EMBV3_13926 ACACACAGTAGTTGGTCAGACCTTAAATATGGAGTTTGTCCTTTATAGGTCAGTGCCCTT Gene GeneID:517211|NAA50:NM_001075750:83_cdna Constitutive 2 NULL GeneID:517211 1 GENE NAA50 MGC140022 NAT13 N(alpha)-acetyltransferase 50, NatE catalytic subunit EMBV3_26236 GACCCTTTCTGCTCACAAATCTGCTCCAAGCAAACTGCTTTTGGCCTCGTTCACTGGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18715 CAAGCTAGGCCTCTTTCTTCTTAGCAGACTTCCATGTACCACACCAGCATATCCATGCCC Gene GeneID:616576|GCK:NM_001102302:61_cdna Constitutive 0 NULL GeneID:616576 4 GENE GCK MGC166120 glucokinase (hexokinase 4) EMBV3_34160 TATCTGTCGCTTGAGAAACCTGTATGTGGATCAAGAAGCAGTAGTTAGAACCCTGTATGG Gene BVV0101_056466 + 0 NULL GK000015.2:12173720-13516581 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19777 TCCACCCTTCCTCTCAGGATCTAAAATAGGAGCCCATGGAGAGGTACCCAGTAAAGTCAG Gene BVV0101_040673 + 0 NULL GK000015.2:55375313-55380884 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061876 TCONS_00061879 TCONS_00061880 TCONS_00061877 TCONS_00061878 1 XLOC_037159 Coding TCONS_00061876 XLOC_037159 Coding Coding KLHL35 15:55377898-55385878 j TSS46005 3848 1 TCONS_00061876_3 334 0.181392931392931 7 0.518611354806367 6.85091839608354e-05 3.90889087181328e-11 1.09299289253203e-06 1.37260956248638e-13 6.9370251169282e-14 0 1.57961796827566e-14 8.19701689188707e-06 2.04983599862642e-06 5.29081534874655e-09 2.46074397601208e-05 2.79896945648054e-05 6.68114440767419e-06 0 9.71262028564876e-21 0.00162784514956191 0.000168265899001764 0.00290488417570503 3.35350644617232e-08 0.000330910641427711 0.000118624200319646 0.00120667806838937 0.000170938499836168 0.000132908455429283 0.00014785463450085 0.000368958586480934 0.000105450617577206 6.25839208513704e-05 3.18812726691867e-05 0.000156331697034213 XM_005216254.1 KLHL35 PREDICTED: Bos taurus kelch-like 35 (Drosophila) (KLHL35), 0.0 1568 100.00 0.225571725571726 NM_001039548.2 KLHL35 Homo sapiens kelch-like family member 35 (KLHL35), mRNA. 0.0 1072 87.34 0.225571725571726 TCONS_00061876_3 sp|Q6PF15|KLH35_HUMAN KLH35_HUMAN Kelch-like protein 35; 0.0 543 89.58 0.859281437125748 6 coding 0 0 0 0 -0.00452007295290252 0.965567502827944 -0.0019093368720581 0.979612675311773 GACACAGCAAGATTACGCCCCGATGGAGGTCACGAGAATGGGCTTGAATTCTAGCTCTGTTACTTTCAGCTATATAACCTTTGGAAAGCCAAAGTCGAGTAAACAAGATTCATGGACCTAGCTGAAATGATCGTGGTCATCGGTGGTTGTGACCGAAAGGGGCTCCTGAAGCTGCCCTTCACCGACGCCTACCATCCAGACAGCCAGCGCTGGACCCCGCTGCCCAGCTTGCCCGGCTATGCTCGCTCGGAGTTCGCAACGTGTACTCTCCGCAATGACATCTATGTTTCTGGCGGTCACATCAACAGCCGTGATGTCTGGATGTTCAGCTCCCATCTGCACACCTGGATCAAGGTGGCCTCGCTGCACAGGGGCAGGTGGAGACACAAGATGGCGGTGGTGCAGGGGCAGCTGTTCGTTGTGGGCGGCTTCGATGGCCTGAGGCGACTGCGCAGCGTGGAACGCTACGATCCCTTCTCCAACACCTGGGCGTCGGCGGCCCCGCTCCTCGAGGCAGTAAGCTCAGCCGCTGTGGCCCCCTGCGCCGGCCGGCTCTACGTCATCGGGGGCGCTGGGCAGGATGGCGTCAGCACCAACAAGGTGCAGTGCTTTGATTCCAAGGAGGACCGGTGGAGCCTGCGGTCACCGGCTCCCTTCTCACAGCGGTGCCTTGACGCTGTCTCCCTGGATAACACCATCTATGTGGTTGGCGGCCTTATGAGCAAAATCTTCACCTACGACCCTGGCACAGATGTCTGGGGGGAGGCAGCTGTCCTCCCCAGCCCTGTGGAGAGCTGTGGGGTGACTGTGTGTGATGGGAAAGTCCACATCCTCGGCGGGCGGGATGATCACGGGGAAAGCACCGACAGGGTCTTCACCTTTGACCCCAGCAGTGGGCAGGTGGAGGCCCAACCGTCCCTGCAGCGCTGCACGAGCTCCCATGGCTGCGTCACCATCGTCCAGAGCCGGGGCAGAAATAAAACCTTCTTCAAAGGTCGAGTCTGTGTTCCAGCTCAAGCCTCCTTTGCCTGGAGAAGTAATGCCCAATATCTGCTCCCTGCTATGTCTCTTTACAAAGCACTTCAGCACTTCATGTTACTTCATTTACCTTCATAAAAACAGTGTGGACATTTAAAGAATCATGAAATATTTCATGCATAAAAAGAAATATATTTGTACAGTTTAAAAATTAAAATAAATATCTGTGTTCCCACAACCTAACTTAAGAAATAGATCATTACAAATGCCTTTGTAGGTCCCCCTGTCTATTTCCCAATCCATCCCTTCCCATGTTCCTCCCAGGAATAGTCACTATTCTTGTATTTCAAATTGTGCTGTGCTAAGTCACTTCTGTTGTGTCTGACCCTTTGTGACCCTATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTCTCCAGACAAGAATACTGGAGTAGGTTGCCATGCCCTCCTCCAGGGGATCTTCCAGACCTAGGGATCGAACCTGCATCTCTTATGTCTCTTGCATAAGAGATGCGGGTTCTTTACTCCTAGAGCCAACTGGGAAGCCCATATTTCAGATTATCAACAGTTAAAAAAAAAAAAACAAAAACAAACTTTTAGTTAGCTAGTTACTAATATTTGTAAGAAAAGAAGACTCTCCCAAGGCCACATACTTAGTAGAAGGTAGAATATAGGATTCCTGAGGAGGGAAAAAGGGGTCAGATGGCTGTCTCGTCCCTGAGCCTGCCCCTTCCCCCACAAAAATACGCATTTCTGACTGCTGGAAGTAATATGAAGCCTCTAGGCGGAGACCTATCCTCCGGCTGGGGCTTAAGGACCCATTCGGGGTGAGGTCTGGGCTTCTGGGGAGGTAGTTCTTGGACGGTGGCATAGGGACAGAAAATCAGGTTTGAAACCTCCTTCCGTTCCAAAGGTCCGCATCTGGCTTGAAAAACTCTGGACTGAGTCTACGCATAGGCATCATGAAGTACCAGGCACTGGCCAGGTCAAGTGGGATTCTCAAGGTGGGGGCGTCCCAAGCTAGCACTCGAATCTGAGATCCAGAGCCCTAGAGGTTTGAGGCGGGTCAGAATCGTGGGTTAGAAATTCTCCGCCTGGAGGCCCCTGAAACAGAGTTTAGGAAATCCAGAATGTGGGTTTACGGATTTAGGTGCAACCAGCAGTGAGACTGCACTCATTGCTGGGTCTGTGGGTTCAGGTCTAAGATTCTAAGTGTTGAGCCCCGGGGCCTGGGATAACGGAGTTCCTGTTAGAATTGAGAGGACGGATCGTGGTCCCAGAGGCTGCACCCAGGGCTGACTTTACTGGGTACCTCTCCATGGGCTCCTATTTTAGATCCTGAGAGGAAGGGTGGAAAAAAAAAAAAGAAGGTAGACTATACAGCCCACAGATTTCATGAAGCTTCAGAATCTAAGAGGCACTTCTGGTCAGAAAGCTTCTCCCTTTCTAAACCATCCTCTCCCATTTAACCACCTAGCCCTGCTGGCTCAGATGGTAAATAATCTGCCTGCAATGCAGGAGACCGGGGGTTCGATCCCTGGGTTGGGATGATTCCTTGGAGAAGGAAATGGCAGCCCATTCCAGTATTCTTACCTGGAGAATTCCATGGACAAAGGAGCCTGGCAGGCTACAATCCAAGGGGTCGCAAAGGGTCAGACATGACTGAGCAACTAACACTTTCAGTGATAGATAAAATCAAAAATCAGACAACTAAAAAGAGGCATAGGCTCATAAGTAAGCAAACATGTCTGAGGACCAGAAACAGAACTGTAAAACGTAAGGCAGAAGCTCAAGCTTTTGGATTCAGACTCTGGGATAAAGGTATTAAAAACAGATTCCAAACCCAGGCTCGCTGCTATAAGCCTGGGCCAAGGCGGGGTTCCTCCACTCATGAAAGAAGCGGAAACAAAACAAAGACAGTTGCAGAACCCTGAGCAGACTTGTGGTCAAGGCTCATAGCAAACTGGAAGCCCAGGGTAGTGGGCACCAATGCCACAGGCCTCTGAGACACCATTGAGTCCAGCTCTGCATCTGGACATGCCACAGCCCCAGCATAAACGGGGGGCACAAGCTCTTGATGCCATTACAAACAGCTGGGTTGGCTGGGGCTCTGGGGCAGCAACATAAAACTGTCGGGTCGGGAGGGGTGCGCCCAGTGGAGGAAAAAGGGAACAAAGGATGGACACCACAGACTGAGGCGAGGCCCAGCAGAGCTGGCAGGCCCCATCTGGGGCTTCCCTTATTTGCACTCAGATTGCCTTTTGAAGAGCTATCATCTGCCCCTCCATCCCCTTCAGTACAAGGCAGCCCCACGCTGTTCTCCATCTTCCAAAGCCCCAGGGCCCTGTCTGCATGATCTCTCCAGCTGGGGCTGGCCCAAAACACCCAGCACAAAGGCCTGGGTCCCAGCTGAGCTCCTACCCTCCGATTATCCCAGATTAGGGACCCTGTGACCATCTGGACATGCTGATAATGGCAAAAGGGGAGGGCAATGGGATAGAGGCCTAGCTTCAGAGCCTGCCTCCTCCCACCCAATGGAAAACACCAGGACAAGGCAAAGAAGGTGCTGTATTGCCTACCCAGGTAAAAGCGAGTGGAAAGTTAGGAGCAAATGCAGGGCAAGCTTTCCCCAGAGACGTGGGCATCTTCCCCAGGCTAAACACTTCTGTGTAGCCAGGCAGACTGCCCAGTTTCCCCCATGATGGCCATTTGTCCCAGTGCTTGCTCATGCCAAGTGCCAATGCCCTTTCCTGCTGTCTAGGCGGGTGTCAGGCCTGGGCAGACCTAACACCCTCCACCCCAGAGCTGATCACTCCCTCCCTGTACCCTTAACATCAGCCCT EMBV3_08749 GAGCCAACGTGCAATCACAGGTGGATACCCTTCGCCATGTTATCAGCCAGACAGGAGGAT Gene GeneID:540688|PBX1:XM_002685833:60_cdna UTR3_Alt 2 NULL GeneID:540688 3 GENE PBX1 NULL pre-B-cell leukemia homeobox 1 EMBV3_36064 CTGGGCACCTGGAAGAGCGACCCTGGCCAGTTGGTGCCTCGGGAGGAGCTCTTTGTGACT Variant GeneID:618607|AKR1A1:NM_001076513:322_cdna 196^315 1 EMBV3_17596 GeneID:618607 3 GENE AKR1A1 NULL aldo-keto reductase family 1, member A1 (aldehyde reductase) EMBV3_32914 GCCTGGCATGCTGCAGTCCATGGGGTCACAAAAAAACCAGACACGACTTAATGACTGAAC Gene BVV0102_192966 + 0 NULL GK000010.2:40530339-40752875 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26325 TGTGATTTGGGCTGCTTGGAGCTGCCTGGCGGTGCCTTGGGGTCTCAGCTCAAAGGGGCA Gene BVV0102_354614 + 0 NULL GK000003.2:48527588-48600669 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173218 1 XLOC_104326 Coding TCONS_00173218 XLOC_104326 Coding Coding LOC614522 3:48446198-48552426 j TSS128829 6552 1 TCONS_00173218_2 220 0.034035409035409 8 0.938396076327111 0.000196800613589243 0.000149576280869901 2.91650870773994e-11 0.00029030335819212 0.000108475496657532 4.95627610202476e-19 0.000111516825610742 0.000146938474758482 7.56424582711968e-05 7.32097093522173e-15 2.06194860592557e-10 1.57881218320317e-29 2.13739009143474e-05 1.09744177600006e-08 9.57461416519983e-05 4.22186160476963e-08 0.000117601556316228 1.4958196802158e-08 0.000196950793556302 4.45967199004745e-15 8.38799712797524e-05 2.2687142357987e-08 1.36306409435251e-08 2.33182281926303e-08 4.76535704625854e-05 3.71990765852127e-22 1.45914383105722e-05 6.21570521339856e-09 1.34628454570701e-10 2.34046961060881e-05 XM_005204363.1 LOC101903062 PREDICTED: Bos taurus transmembrane protein 56-like (LOC101903062), 0.0 4601 100.00 0.389194139194139 NM_152487.2 TMEM56 Homo sapiens transmembrane protein 56 (TMEM56), transcript variant 0.0 2452 75.75 0.555860805860806 TCONS_00173218_2 sp|Q96MV1|TMM56_HUMAN TMM56_HUMAN Transmembrane protein 56; 8e-109 318 62.36 0.995454545454545 1 coding 0 0 1 1 -0.705764296933586 0.304819358025957 0.0235602375375345 0.75996591509869 TGGTGTCCCCGGGCCCGCGGCCCCCGCCTCGCCCGGACGCCCCGCGTTCCAGTCGCGTTTCCCGGGCGGTGTGATTTGGGCTGCTTGGGGCTGCCTGGCGGTGCCTTGGGGTCTCAGCTCAAAGGGGCAGGTGTTTGGGCATCCATGGAAAGCTTTCTTGTTAGAGGCCAGTACACGAGATCAGGTGCATCAAGTAGGTTGAAGAAATATGGATACCAACACCATACTGCTCATCAGCACTTGTTTTGCCAGCTTTTTCACCTTTCAGATTATTTTCCACGTTGTAAGTTACTGGTTTTCAGCAAAGATTTCTCCAGGTTTTAATAACCTCAACTTCAAAAAGAAGATTGAATGGAACTCAAGGGTGGTATCTACGTGTCATTCTTTGGTGGTTGGGCTTGTTGGCTTGTACATTTTCTTGTTTGACGAGGCTGGTATTGCTGATCCACTTTGGGGTGATACATCTCTTGGGAAAGTGAATGTTGCTATTGCTTCAGGCTATCTCGTTTCTGATTTGTTGATTCTCATTTGGTATTGGAAAGTGATTGGTGATAAGTATTTTGTAATTCACCATTGTACAGCGCTGTATGCATACCACTTTGTACTGAATGATGGTGTGCTGGTGTATGTTGGGAATTTCCGCCTGCTTGCAGAACTTTCCAGCCCTTTTGTGAATCAGCGGCCCCTGGGAATAGATTCAATGGCCTTGGCTTGGATTTTAATTCAGTTTTCCTGGATTTCTACTTGTGTGGTTTTGGATGTGATGAATGTCATGTGGATGATCAAAATTTCAAAGGGGTGCATCAAAGTCATCTCTCTCTTAAGACAAGAGAAAGCCAGAAAGAGTCTTCAGAATGGAAAACTTGACTAAAAGCGGGCTATCGATAAGCATACTTCATTACTACCCACAGTGTCTCTTCTGATAGGATAAATTCTTGGCATGTTCTTGTGCTTCTTTATTAATTATACTTGGTATTCATACTTTCAGTGTTTTTTTATCTTAACCATTAGAAAAGAGAAACTAAAACAGTTTTTTTTTCCTCAAGATTTATTTTCTAATTTTCTTCTGCATTATAAGCATGGATAAAATCTTAAAGATTAAAATAAAAATGTATAAATATTGATTGTGAATCTTTTTGGAAATCTGTTCACTGGCATTGGTACTTTTCTCTGTGAAAAGATGACTATGCTAATTTGGTGCACTTGGTTTTATGTCACTGATTTTGCTGAGAGAATGGGAACTGCCTTTAAGTCTGTAAACAGCTCTCCACATTCTGATGCACTGTGCTTATTTCTTACTATGGCTGTCAATTCCTGAAGTAGAGTTTGGTTTCCAAATTATTGAAATGTTCTTTTTCTTAGACTATTAGATGTGATGTCTTTTTCATTTCAATTTGCTATCATCTACTAATAATGAAATATTTTGCTTACTTTGGGAACCTCTAATTAGTTTTCATGGGAAATATCTCCTACAATTTTGGATTTTTCTGACATTATTGTATCTGTTTTTAACATTTTATCAAATTATTGCTTTTTTCTTAAATAGGAAAGCTTAAGACCAATCTAATAGAGCTCCTTAAGAGATGAATTCTTCCTACTAAACACGCATGTTCTAGATGACTAGTTAGACTAATACGAGGAGTCATTAAGAAAAAGGCTTTAACACTGCTGTCTCTATCTGCTTCCCTTGCATTTTTTTCTTTGAAAACTATATTATTTCTATTTTCAAAACCTCCCATGAGTTCTGAACCCAACATCTTTTAGCACCATAGTCTTGTGCAATATATATTTATCAGGCTCCTAAAGTAAGCCTCTTCTTGATGAGACCAAAACTGCAAAAACTAAATAAATAAGTCAGTATTCATATTTTACTCACAATTTACACCCATGCTTGCTAGCATTTTGAGTGCTTTGATTTTCTGTTTTTCTTAAAAGACAGGCAAAAGATAGATAATTTAATCTAAGTATTCTGATTATCAATATTATTATTTTATGTGAGGATAAATGAATGGTGACTTTTTTTTCTGTTTGTGTATGTGGGTATATGTTTGCTTTTGTTTTGGTCCTTACAACCCAAATATAAAATAACATAGTTAGCTATTATTGTCTTTATTATTGTCTTTCTTTTTCTCAAGTACTTGACTTTAATGATCATTCTTACCTAAGGAAAAAAATTAATCAATGGAAAATACTTGAATTTAATTGAACCCAAACCAAAAGATCTAATCCATTCAGTTTCTCAGTTTGAATGAGAATGTGCTACTCATTCTCATTGTCCATGTTATGGTGATGAAGGAAGGCTAGCTGGATATTTCAGGACTTTTGATTTAATGTGATTTGATTTGACTCAGCTGTCCAATGCAGATAGGGCCTGATAAGTTATAGAACATTTAAAGAAGGTAATTGAAATCTCAGTCAGTAACTAAATGATAAATTGAAATCGATTGGCTTATACCAGTGCACTTATTTTTGAAAGGCTAAAAGTAATATAAAATGTAAGTATTTGTTTTCAGATTTACTAATATTACATTGATAATTTGTTATTAAATTTAGTCCCTTTTACACATAGGCACTTAGACATGTATTGGTTGTTTAGAGGGAGTATGAAAGCATGTGGTTTTATCTTGTTCCTTTCTTGCTCTTTTGCAAGAAAAATGGCTTTCAAAAAGGAAAACACTTATATTAGAAAGCTATTTTGGAAATTCATTCCTTTAGAAAGAAACAAAATGTGAAATAAATAATTTTGACTATTCAGATATTTCTGTGGTTTCTGAACACAGATTTTAAACCCATCATCAATATGAAGAAGATATAATGCTATATAATATGAGTGAGTTTCCATATAGCAATTTCAGTTTTTACAGTTGTTATTTCATGCTTAAAACTTTATTTTTACTTTCACCAACAGCACCTTTCAGTAGTATAGCCCCTGACTAAGTAAGAATAATTAAAGTATCAATGTGTTGAACTGAAGTTTGTTATTCCCTTAGTCAGCAATTCTTATTTTATGCTGGCTGTATGACAGATAATTTAACATTCAGATTAAATATCCAAAATAGATTCTACGTACTTCCTCATACAATAGATATGAAATGAAAAAGACACTATAAGCTGCCATGCTACTTTAAGTCAGATCTTTACAGGAGCTATACTTTGCTGTTCTGTGATTTTATCCACCTGCCTAAGATACAAGTAGTTAAAGACAAAACATTTCATTTATTAAATAATGAATTTTTCATTTATTAAATGACAAACTTTTGCTAGACATTTTACATATTAAATATTTTGACTACATGGATTAATTTAAATGATTCTATTGATATTAGACATTCTGATATTAAACAACTGTTAAAATATTTATAGAAAATGAAAACAAATTGGTATAAATTTTTAAGCAACTCTATTTTTGTAGAAAAAAGTTAGTGACAACCTGTAACTATATAAATGTTCTCTGAACATGTAGTACTCTAGAAAATAAAAAGTTCATTCAAAAATTTGAAAATGAGTAAAAGTCAACTAAATATCATGCAAGATCATAAACTCTGCATTAGATATTTTATTGGGGAGAATTTAAAAACTATGAGCTTGAGTTTATAGAGTCTGCATTATTGTGTCTAAAACCTTTTTAATGAATATCATTTGCATTTATTTAAATCTCAGTATGAATCTGAGTGCTGAGAAATGAATTCCTGCTTAAATTGTGTCTTGATATATCATAGTAAGTTGAAATTCAATATTTATTCCAACTGTTAGTTTTGTTATTTTATGGAGTAGTCTTTGTTCAGAGAAATAATGATGTTTTTATCATTCCTAAGGGTGGCTCATATACTGTGGATGACCCAGTACTGTTGTAAAGGTCTAGTTTAAAAAACTGCCTAATTTATAGGTGTTTGAATCAAATTCTTTTCTAAATTTTAGTGACCTATTTGACTCAAATAAAAATTTTGCTGAAAGTATCAGTTTTTAAATTATATATTTTCTCTGAGGTGCACTAGGCATTTAAAGAGTGGTTCTTCCCTGTATTGTTGGGTACACCAACATTGTAATCATGTGTTTAGAAATATTCTTCTCATGGAGATATATAGGGGGGAAAGTATGTTGTAATATTCATGTTTGTTCTACTTCAGTTTTAAGGAAAATAAACATGTTCCAAAAGACACTACTAAAATAAGTGTTTGAATAAATTTCAATTTCTAGGTTTCTCTTCACTCCAAATACGTAAATATACATTTCAATTGGCTTTAAGTGGTTTAATCTGTTAAATGAAATTTGAAAGTCCATGTCATTGTTGACATCATCAATTATACTTCATAGAAAATTATGTATTTATGTGTTTTGGATTCTATAAGAAGCAAACTGGTATAATGTTATCATAATGTGGCAGAGTATATCTCAAAAGGTGCAAACCAGTATAGCCCGGAGACCCTCCTGTGATGAGAGGCCCCGGGCGCACACACACCTTCCTAGCCTTAACCACAGCTGGTTAATGACAGACACACTAAGGGTACTGAAAGCAAATTCTGACTTAAAATGTGTGATATTAGTGAGGACAAGGAAAAGCCAGCAAGACCTAAGGTTGGAGGAGATAGTATGACTGCTTTGCCCTTAAAAGCCATGATGTTCCTCCCTCAATCCAAAAGTTTTCTCTCTGAATATTTTGAGCCCTTCCCTCTCATCAGCACCTCTCTCCTTTCTATACCAACTTTTGAGGCCTCCCCAGGTGGTGCCAGAAGTGAAGAACCTGTCTGCCAAGGCATGAGATGTAGGAGACATGGGTTCCTTTGCTTGGTGGGAAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGATAGAGAAGCCTGGAGGGCTACAGTGCATAGGGTCACAAAGAGTCAGACATGACTGAAGCACATTAGCATGTGTGCAAATGTGTAAGCTTCCCAGCCCCTTGTGGCAAATTTAGACGTTCATTAGTATCTTCTTTCATTGGGGGAAAAAAAAAACATTGCTGTAAGCTTCAGTAATGAATAGACAAGCCATAATTTATTAAGAGGCTACAGGAAGCCATTTAACATTTAATAATACTTATTTATAACACCAAGCAAAGCTTATAATGTTATAGTTTTATTGAGAAACATCTTTAGGTGTCTTTTCCTTAAACTGGTTTAGCAATAAGAGCTTTATAACATGTTTCAGCTAGGGATTCACTGCAGGCCCGTAAATTATCTAAATGTTCTTCTTTAGACCCTCTGACAGGTGAGGGAGGAACTGAGGTAGTTCTGTGTTATGAGGATGTTATGAGGAGGGTGTGCTGATATGTTGCAGCATTATTGAGTCTTGCTCTTTAATCAAGCAAATGTAGTCACAGTCCTGTTTCCTTCAAAAGTGAGCGTATTGTGAGTGAATTACTCAGGGTGTTTTCCAAAGTACAACACCCAAGGATTTGAGCCCTGTCTCTTTTTAGCCCAGACCTCAAACTACTGCTTTGTAAGGTCATACCTTTCTTGGAAGATATTTTGGCAGTGAAACTAAAGATTGGTTAGTTTGCATAGAAAGTGTTTACACTGATTCCCTCCAAGGAGTAGACAGTTTTAAAATCTTAAAGATAAAAATACCTCTGGCTGAAAACTCGTTAATTGTCATCTGCATGTTTTTTCTTTTATATCTTTATGTAATTCTTGCTGTAATTATGCATTAAGGTATTTGCTACTTGTTGGTTAATGAAGCACTAAAAATATAACTAAATAAAATGTGCTATGTATTTTTCTGTTTCTTGCTTGGTTTGCTTCTAGTATGATTATGTCTACTTTTTACTCAAGTACTTTTTGCACAGATAATACTATCTTACTAACGTGTACCTGGGATGAGTTATGAGACTATTTTGGTAATTATTTGATTTTGTAATAATAACTTTTTGACATAGATTTAATTTGAAGAAGTTACTTGAAAACTTCAGTAGATGTGACATCTATTGTGATATACAATTTTTCTCTGAGAATATATCACATTAATATATAATTGTCAAAGATTTTAGAAGTCTTTCAAAATACATTTATTAACATTTTGAGAACACACCTTCTAATGTATTTCCATAAAGCTGAAGAACTTTTATTTACAGAATGTGTAAGACTTGGTAATTTACAAATCAATGTTACTCAGATTTATCAGCAATTAAAATAGCAATTTAGTGTTCTTTTTTGTTTCTGGTTGTGCTTTAGAGGGGTTTCTGGACATCTTTGTGTATTTCCCTTAAAAATTTGGAATGTTTGTATACTTAGTATGTGTGCCAGTTTAAAGTAAATATATGCAAGTTATAAGCAATAATCTGCATGTTATACAGGGTTGGCATTTCTTTGTCATGGTAATTTTATTATTTTAAGAATGTATAAAATCAGTATCCTTATCAATATTTATATATAAATCACTTCTCTCCCCCAATAAAAAACACTGGGATTTTCTTGTGGTAGAACACTAATATAATGTGGTGCAAAGCTTTGTATTTTGTGAAAAAAATAAAATAAAATCACAGTTATTTAGTGGAAAAG EMBV3_40850 TCGTATGTGCAGACACAAGTCTGATTGAGCTTCTAGGTTTCATCCTGGCCAACGTCAGCC Gene GeneID:615040|LOC615040:XM_002690451:323_cdna Constitutive 0 NULL GeneID:615040 10 GENE LOC615040 NULL similar to olfactory receptor C6 EMBV3_30925 CCTGCTCACCGCAAGTAGAGAAAGCCTGCAAGCAGCAATGAAGACCCAGCAAACCAAAAA Gene BVV0102_246011 - 1 EMBV3_02450 GK000001.2:1310318-1324543 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000030 TCONS_00000029 TCONS_00000028 1 XLOC_000008 Coding TCONS_00000030 XLOC_000008 Coding Coding LOC784171 1:1306593-1312293 j TSS13 4353 1 TCONS_00000030_3 380 0.111647139903515 4 0.236883663800667 0.000288903641047249 0.000342814700096679 1.81951454410831e-11 0.000370016347666466 5.64927291460672e-09 8.46775289208814e-05 1.15917574317712e-08 5.59406544094081e-08 5.49956549484275e-09 1.20715778580423e-07 1.36372175451753e-07 2.91721151689071e-07 4.94249677252014e-05 7.02187976677081e-05 0.00020266602873793 0.00122016702478909 0.000557950322092446 0.000186301093993728 1.84318755695384e-08 0.000188438221545617 4.54577562043085e-08 9.93443289712825e-05 0.000320479459317415 0.000747222563719598 0.000124406643673443 2.64841916952639e-07 0.000206555751073061 8.17953005139035e-07 4.63179542159244e-05 4.9379366563631e-05 XM_002684586.3 DNAJC28 PREDICTED: Bos taurus DnaJ (Hsp40) homolog, subfamily C, member 28 (DNAJC28), transcript variant X1, mRNA. 0.0 4653 100.00 0.592464966689639 NM_017833.4 DNAJC28 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 28 (DNAJC28), transcript variant 1, mRNA. 0.0 1572 85.95 0.309671490925798 TCONS_00000030_3 sp|Q9NX36|DJC28_HUMAN DJC28_HUMAN DnaJ homolog subfamily C member 28; 0.0 661 82.89 0.997368421052632 2 coding 1 0 1 1 0.0861902326042292 0.640518376387951 -0.0752019746426361 0.49161459286764 ATGTGCTGGTACAATCATTTGCCAGATAAAAACAGAAACGCAAGTAATTTCCTGAGAAATTTCGGAGAGGGTGTCCCCGGCTGCACACCCGAAGAGGCTGTCCAGGTCCTGTTCGGGGAAACGGACTCGTCTCCTCCTTCTCAAAACAATTTTCCGAGGGGCGTCGCCCTCCAAACCACTCGGACTTCAAAGGTCCCCACCTACACCGGCCACAGGCTACGAGAAGCCCCACACATCTACGGAGGCGCCACAGCGTCCTTTTCGCCGCCTCACCTCTCCCCGCCTCCCTCCTCCCGGAAGCAGTCCTGCGCGCGCCGCACTTCCGGGAGAACTACATCTCCCAGAATCCCGCTCAATCGACCCATCTTCCGCTCCAGGTATAATACTGCCCGCCGCACCCCGAGGGTTCCCTCTGTGTAAAACGCAGATGGTCTAGCCCAGCGGCGGAGCTTGCCGCGGGCCTCCAACGGAGACGCCTGTGGAGCGAAGGGCAGATGGCGCACGCACGCGCAGAGGCTCAGCTTGGTAGTGGGAGCCGCTGAGCCGCGTCTGAGATCATTGCTAAGGAAGAACTCTGGGTACCATAAGGAACACAACGTATGTGATGATGGCTCAGATCTTAAGACCTCATCTGAGAAGTGCTTCAGTGATTCCTAATCGAATGAAAATGGGTCCATATCTTGTTGTCATAAGAACTAGAATGATGTCAACTCATAAATCCAAAAGGAATATAAGAGAATATTATGGGCTGCTGAATCTGGATGAAGGCTGTTCTGCAGATGATGTCAGGGAATCTTTTCGTAAGCTTGCCAAGCAATACCATCCAGATGGTGGCTCTAGTACTGCTGATTCTGCAACGTTTATAAGGATTGAAGAAGCTTACAGAAAGGTACTTTCCCACGTGATAGAACAGACAAATGCCAGACAGAGTAAAGTTGAAGACACAGAAGAAGAAGAAGAAAAATTCAAATATAAAACACCCCAACACCGGCATTACTTAAGTTTTGAGGGTATTGGTTTTGGGACTCCGAGTCAACGAGAGAAGCAGTACAGGCAGTTTAGAGCAGACCGTGCAACTGAACAAGTGATGGAATACCAAAAGCAGAAACTGCAAAGCCAGTATTTCACTGACAGTGTCACTGTTAAAGATGTAAGACACAGTAAGGAACGAAAGATAACTCGGGCAATAGAGCGTTTGGTGGAGGATCTCATTCAGGAATCAATGGCAAAAGGAGACTTTGACAATCTCAGTGGGAAAGGAAAACCTCTGAAAAAATTTTCTGGCTGTTCATATATTGATCCTATGACTCACAACCTGAACAGAATATTGATAGATAATGGATACCAACCAGAATGGATCCTAATGCAAAAGGAAATAAAGGATACCATTGATCAACTCAGAGAGGCAATTTTAGCATCAAGGAAAAAACTTGGGAATCCAATGACATCAGCCGAACAGAAACAGTGGAACCAAGTTTGTGAGCAGTTTCAAGAAGACATCAAAAAGCTAAATAAGCGAATTAATGATTTTAATTTAATTGTTCCCCTCCTGACTAGGCAGAAGGTCCATTTTGATGCACAGAAAGAAATTGCCAGAACCCAGGAAATATACACAACCCTTATAAAAATAAAAGAAATCACAAATAAAAACCCAAATAACACTGATCCGGGAGAAGGAGAGAAAACACCTGGAGTTAAGACAGTTTTCTTTAACTGGATGAATGTGTGGAAATTTATTAAAATATGACCATCTCAATGTTCACAGTACTGCCCCAAATAATTTTCAGTAATATTAACACACATAGAGGCTGAGGTTTCTTTCTATAACACAAGAGTCTGAGAACTGTGCACCTCTGTACTTTTCACAAAACGACCCACATCTCCAGTGATGTGTAAGTGAGTGAGAGAACTGTAAGAAACAAACTGAGTCCGAGAAATATTCAACCAGCTTTGTTCTGAAGACATAGCAAGACAAGAGGAAACAATTTAATACTGACACTTGAGTTTATTAAAGCACAAAACTAGTCTAAGACTTTTGGAACATTCTCTATATGGTTGGAAATATTACGACAGGAAATTAGTGTAATGGACTTACAGCACTCTTCTCTTCTTTTTTTTTTATAAAGGCCTTCTCTGTGGGTACTGAATAAAGAAACCACCAAACATCTAGGTTGTACTTCACGCTAACTTCATGAGCCATTGGCAGCAAAGATCCATCAGCCAAGCTAACTGATTTAGCTATTCTAGAAATAGACTCCAATGTCCACTTTAAAGAGTTTATTTTCTGACCTCTCAGAGGTGGGTTCAATGGAAACAAAGTTTCACTTATGGCTTCATTTCTAATCAGAGTCAAAATGTTTTACAGAAGCCTATCTGAAGCCTCTCTTGTATTACACTTCTCAGAGGCTTTTTCAATGAGAGTAATATATCAGTTTACAGTCTTAGGGATCCAATTTCCTGTGTTAGGAACCCTTTAATAAGCAACTACAAGATGTCAGAATTTTGTGCTCACTTGCACCTTTGGCAAATGAGAAGAGATTGACATCCATGAGACTGTGTCCCATCCACTCTCAGACTGATCTGACTTTTTAAGATCTGTGTAATTGCCTTATTCACAGAATTGGGCAACTAGACTTGTCAAAAGAAGCTGGTCTGTTTCCTTATTTAATTCAGAGTGCTGTACTATGGAAGTGTCTCAGAAGCATGTCACTTGCCCCTCTGATTTTGGAAGAACAAGTGATTTTGTAAAGTATGTGATAGATAAGTAAAATTACATCTTCAGAAGGAAATTTCAGACCTTGTGCTTAGATGATGGGGCATTAATGGGTATAATATGTGATTATTTTGTTGAATAAGTTATCACTAGCTTCTGCAATGATCTATTACTCTATATACAATTGTGACCGGTGTGAAATAAGAGCTTTATAATAAATGCTGTTGCTCTAAAACATTTTATAAGGTGATGCTTCTGTGAATCTTGTTAAATATTAGATACATGGCACCTAATTACAATACATGATACCTAATTATGGGGCTTCCCTGATAGCTCAGTTGGTAAAGAATCCGCCTGCAATGCAGGAGACCTTGGTTTGATTCCTGGGTCAGGAAGATCCCCTGGAGAAGGAACAGGCTACCCACTCCAGTATTCTGTATAGACCATAGGGTCACAAAGAGATGGACACAAGTGAGTGACTTTCACTTTCACTTACCTAATCACATTACAAGAACATACATAAAGGAAACCGTTTTTATTTTTGGTTTGCTGGGTCTTCATTGCTGCTTGCAGGCTTTCTCTACTTGCGGTGAGCAGGGGCTATTCACTGTGGGGCTCAGGCTTCTCATCGTGGTGACTTCTCGTTGCAGAGCGCGGGCTCTAGGATGCGTGGACTGCAGTAGTTGTGGTGTGTGGGCTCAGTAGTTGCAGCTCATGGGGTCTAGAGCATATGCTCAGTAGTTGTGGTGCATGGGCTTCGTTGCTCCATGGCATGTGGAATCTTCCTGGACCAGAAATCGAACCTATGTCCCCTGCATTGGCAGGTGGATTCTTACCCACTGAACCACCAGGGAAGTCCAAGGAAATCTTTTTTCATATTAGCTAATGAGAAGGTAAGGTTATCAGAAAACTCTAGTAATTCCTAATTTCAGCACAGCACTTTATGTTTGTAAATGTCTATATTAATAAATTTAATCAGTAAACTTAATGATTATTCAGTGGTGCAGTGTTGTCTAAACAACTAACAGTAATAATAAACATGTTTTTGTCTGACCATCTGGATGTTTTTTTATCTTCTTGCTTGATGATGTCAAAACTGACAGACATGGACTCTTCTTGCTAAGAAAGCAAGTTCACTATGTACAAACAGGGTCACTTACTGAAGTAACTTCCAGGCCAGAAAAAAAATGTGGGCCAGTTCATTGGCATTTGTGGAATCAGAATCTGAACTTAGGCTCTGTTTTGATGGAGCATTGACCTTTTTCTGTTGGTTTTTCATCATGTAACTGTCAGCTTTTCAGATGTAGTAATAATTTATTGAGATCTCTTGACTCATTAATAGGCACATATCTGACTCTTGTCTGATTCCCAGCCTTTTCATGGCTCCTTTCTTCAAACTGTACGACGAAGACCCTGGCCCAGCCCCGCGAGTAGATCACAAGTGCCTTTTGTCTCCATGTCCTTGTTCTGTGTGCCCGAGTTTGGCCTCAGTCAGTAGTCTGGTCCCTCAGGACTATAGTTTTAAGTTCCTTGACAGAATGATTGCATTTTTTTTTTTTTTTTCACTTTGAGTAACTCTGGCCCTTTAATTTGTTAATTTAGTGATAGGCCAGTTACATTTGGTTCTTTGAATAATTGAG EMBV3_23220 CCCCCAGTCTGTTAAAAATGCCCTTGTTCCTTGAAGGGAAATCTTGTCAACTCAGCCAGG Gene GeneID:521254|BPNT1:NM_001034539:56_cdna Constitutive 1 NULL GeneID:521254 16 GENE BPNT1 MGC126947 3'(2'), 5'-bisphosphate nucleotidase 1 EMBV3_11943 CAGATAGTTTGTGTCCCTTTTCTTCATCTGGTCCTGGTGCAGGAGTATTACAACGACTGC Gene BVT0102_084775 + 0 NULL GK000014.2:25058782-25105045 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051552 TCONS_00051551 TCONS_00051554 1 XLOC_031226 Coding TCONS_00051551 XLOC_031226 Coding Coding CHCHD7 14:25052770-25062659 j TSS38417 4391 3 TCONS_00051551_11 110 0.351856069232521 4 0.556330906148867 0.00092350448441574 0.000640508347114497 0.000651043401238705 0.000749465260492681 0.000827224732728717 0.000234472621194304 0.000659974095845675 0.000110452069405896 0.000390305394242876 0.000794496704862984 0.000165044598733924 0.00010481803429702 0.000325130818500569 0.000585186275534632 0.00027061476415306 0.00129735331343344 0.000556217596110747 0.000457345568402828 0.000958528976342837 0.000581079014761086 4.35718631763235e-05 0.000938865585612129 0.000922087377323857 0.000519943482267116 2.20918291366312e-06 0.000803247214700319 5.1369065164339e-05 0.000228431948306276 0.000176008798071638 0.000335981141448625 NM_001130759.2 CHCHD7 Bos taurus coiled-coil-helix-coiled-coil-helix domain containing 7 (CHCHD7), mRNA. 2e-156 558 88.29 0.0931450694602596 NM_001011670.1 CHCHD7 Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 7 (CHCHD7), transcript variant 5, mRNA. 3e-136 491 81.82 0.114780232293327 0 coding 0 0 0 0 -2.95794006976114 0.0096016894405448 0.135111694347839 0.0343473188594505 GTTCGGCTGTCAGTCAGGCGGCGGGGCGCGCTCATTGGGTCGGCGGCCGCCGCGGAGCGGGGGCAGCACGTTGGGATGCGCGCTACTTAAGGCCCAGCTGCGTGAGCCATTGACGTGTTTGGAGCTGGAGACGGCCTGGACGCTGGCGGAGCGGCCGCCCGAGGGAGAAGACACTTAGGATGCCCATGGTGACACGGAGGCTGAGGGATCCTGACGTAAACCCTTGCTTGTCGATGCCACTCTGCCTCCTAAATGCTGCCTGTCTTACATGTTTAAGGAATCGGATGCGTCTACCAGATGCATGGCTGAAAACAACTATGACAAGGAGAGCTGTTCTTCTCACTTCTTGAAGTACAAGAACTGCCGGAAGTTCTGGAACTCTGTCATGATCCAGAGAAGACAAAACGGAGTGAAGCCGCCCATGCCCACGGCAGCAGAGAGAGACGAGATCTTGGGAGGATTGGGGAAGATGCCCTATTGAGTGTTTGCATTAAAATTATTTATTTAACTTAGGAACAGATAAATATTTTTAATAAGTGGTTACTGCGTCTTCATAAGACTTTTCAGGCCTTACCCAGACAGATCTCGGATTCCTCAGGGAAAGCCCCGTGTCCTCCACTTCTGCTGTCAGTGCCGCAATGAGAGCGGGCCACCCCGGCTCTGCCACGTCCCCGACTTCAGAAGACTTGCTGAATGCAAGGGGGCCTTAGGAACAGCTCAGTGGAGAGTTGAGCTTTTCTGCCGGGTCTCGAGAGAAAGAAGAAAGATGCGAACAAGGGAGGGATTAAGGGGGTGAAAGGGAGGCAGTGTCTCCAAGGAAGAAGTGATGTGCGTGACAGCATGACGAGGGCGGGCTGGAGCCACATGTGGAGAGCAGTGTGTGGACTGTCCTGGAGGGGAGGTGGGGACTGAGTGGTGGGGAGAAGACTGGACAGCAAGTCCAGGGTGGATACCCGATGGGCCTCAGTCTCAGGCATGTTACTAAGGTCTCTGCCCTGATCTCACTCCTTTACCTTGGTTTAAAAAGCCTTGGGGAGGCACGGGTGTCTTTAAATGACATACAGAGAACTGGTTTTCTTTATGTTTCCTTAATGATGGGCTTAGTCAAAGGATTCTGAGACTGAAGTCTGTGGTTACTGGACAGCCTTCTAAAGAAAAGGTGGTGCTTTCAGAGGTGGGGTTTCACCTGCAGGAGGAGATGGACAGGAGGGGCTGGGGTTCATCAGGTGATGGCAACACAGGATGAGGCTGGAGCTGAGCTTCATTTTATGATATAAAAGAATATTCAGTATCATGACTGGGGTGGGGTTGTAAAGCAGCTCTCAAACCCACGCCTTTTAAAATCCAGGGTCTTTCATTTACAGGATTGCTTTGTAAAAGACACATTATTTGATCAAATTTCATGTGTATAGAAAGTGAAAACAGATAGTTTGTGTCCCTTCTCTTCATCTGGTCCTGGTGCAGGAGTATTACAACGGCTGCTGACACAAACTGTCCAGCTCGTTGGTCCTAGTCCAAAACCCAGGTCAGAGGTTTTTAAACTATGCAACCTTTATTTTCAAATGTGATTCTATTTGAATAAAAGGTAGAACTGTTTCAGAAATTCTTTGATTTGTATTGATTGCTGTAAAAATGATGGATTTAGATAGGAGCTGACAAGCAATGAATATTGTGTAAGAAACATTTCAGTACTTCTAGGCTTATTTAAAAGTGGAATTTTAATGTCACCTTTTTAAATGTACATACCAATATCCACATTTATTTGTCCTGGCCTAGCTCTTTTTATGTTTAAATAGCAGGTTTATCAACATGCAGTCTGTATACCATGTAAACCATTTGTTCAAAGTGTACAATGCAGTGGTTGTTATTAATAGTATACTGACAAAGTTGTCATCCATCCCCACAACTGACTTTAGGAGCCGTCACCCCAGAAAGCAAGCCTGTGCAGGTAGCACTCTTGGCCTGCTCCTAACACACACCACCCTTCGTCTCCACTTGACACCCCCAACACTCAGCAGCTACTCACCTACTTTCTGTCTCTAGAATTGCCTGCTCTGGACATTTCCATAAATGGAATCATGTACCTTGAGATCTTTGGTGACTGGTTTCCTTCACTCACCATCATGTTCTCAAGGTTCAGTCCCATTGCTTGGATCAGTGCTTCGTTGCTTTTGTTGCTGACAAAGCTTCCATTGTGTGAATACACCACATTTTATTTATACATTCATCAGTTGACAGGTATTTGGTTGTTTGTGGTGTTGGCTATTTTATGAGGTGTGTTGCTTCTTGAAACTTGTGTGTACAAGCTTTTGCATAGACAGCATCTTTTTGGATATATGCCCAGCAGTTGAACTGGTGTGACCATACTGGGTCATATGGTGAGTACATTTAGTCTTTTGAGGAGCCAACATGTTTTCCAGAGTGGCAGCACCACTTTACAGTGTATGAGTTCCAATTTGTTCACATGCTCATTAACATTTATTGTAATACCTGCCTTTGATGACAGCCATCCTAGAGGTATCCTAGTTGGTATCTCATTGTGATTTTGATTTGAATTTCCCTGATGGCTGATGATGCTGAGCATCTTTTCACATGCATATTGGCCACTTAGAGATCTTCTTTGGAGAAATGTTTGCTCAGATCCTTTGCCCATTTTTAAATTGGGTTGTATATTTATCACTGCCAGAGTCCTTTACATACACTAGATACATGTCCCTGATAAAATACATGGTTTCTGAATTTTATCTTCCATTCTGAATATGTTGTGTTTGCACTTCATGGTGTCTTGTGAAACACAGAAGCTTTTCATTTTGATGTAGTCCATTTTGTGGTGGTGGTTGTAGCTTTTGGTGTCATGTCTACAAAAAAGTCCAAAGGTTAACATCTGTGTTTCTTCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCCGACTCTGCGACCCCATAGATGGCAGCCCACCAGGCTTCGCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCATGCATGAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCCGACTCTTAGCAACTCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTTGTGCGTTTCTTCTAAGAGCTGCATATTTGTAGTTATCCAGAAGCTCTTGAAGGATGGAAGCAGTGTCATCCACTATAATGGACATAGCAATGTCAACTACTCCAAGAAGCAGCTCTGTCCATAACACTTCCTTAGGAAGCTTCTAGTATATAATAAATGATCAACAGCTGTGTATGTGATTGGAGAGAGCAGGAGAGCAGGCTTTTAAAATTGAACACATTGGAAAACACGGCTGATTCAAACGATGCGAACAGGTATACAGTGTAGATTAATCTGCCCAGAAGCAGCCAATGTTAGGGGTTTTCAAGGTCTTGCATGCAAGTACAGGCACATCCGGTGCTTCCCAGGTGACTCAGTGGAACAGGTTCGATCCCTGCGTCAGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGGAAGTCCCATGGACAGAGGAACCTGGCAGGCCTACAGTCTGTGGGGTCGCAAAAGAGTTGAACACAACTTAGCGACTAAACAGCAGATGTAGCTGTATATTTGGTTTGCAAAAAAGGAGCGTGGTAGTGCGTGAGTGGAGGCGCTTGGCCTTTTCCGCTGAGAAGTGTAGTTTGGAATAGTTGTGCATGGCCGGTTACAGGTCCACTGTAGGTCTTTCCCTGTGAGATACTAGGTCATGGACCCATTTCCCACAGATGGATTCCTTCCCTCTTAGAAATAATGTCAGCTGTGGTGCTTTGCTTGTTCTATCTTTATCTATATGCTGCATTTCTAAGAATGTAATTTCTAGGCTGAAGTTTTCAGTAGTGTGAATTTTGTTGTTACTCCTTCCCCCAGGAAGCACACCTTCACAGTCCTGGATGAAAAGCCTGCGAGTCCTTCCTTGTTCCTCAGGCCCTCATTCCCGCTGGGCACTTTAAAACTTCCATCCTTATCATTGATGAGTGAAAAATGGAATGGGTGTATTTATTTCCCTTGCCCCCCGCCCCCTTTTTTTTTTCTTCTTAAGATTGTTGCTGTGAACCAGTTGGGGAATGCTTGGTTTGGTAAGTTTAATACCTCTTCATCATATGTATTCTATGTATTTTTCCCAGTTTGTCTTTTAACTTTGTATTTTCATTTCGGAGCAGTATTTTATATTTTAAGGTAATTAAATGAATCAGTCTTTTTGCTTATGGTTTCTGCTGCTCAGTAAGTATTAAATGAATCCGGCTGCAAGCACTGCAGTTTGATTCTACTCCACAA EMBV3_00202 CGCCCTCGGCAACTACATGTTTCAACGGAGAGAAAAAGCTCAACTGGCCTCGGAGACACA Gene GeneID:615388|CD300LG:XM_002696037:313_cdna UTR3_Alt 2 NULL GeneID:615388 19 GENE CD300LG NULL CD300 molecule-like family member g EMBV3_19418 GAAGAGGTGATGGGGCTGTGCATTGGGGAGGTTGACACCGTCAGAATTGTTCACATTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18525 CTGGACAGAGCTTCTAGGGTTTAAATATTCTAGCATTGGGGCATGCAGAGATGTGGATCC Gene GeneID:615539|SNAPC1:NM_001101244:211_cdna Constitutive 0 NULL GeneID:615539 10 GENE SNAPC1 NULL small nuclear RNA activating complex, polypeptide 1, 43kDa EMBV3_43476 TGGCTCCCTACGTGAACCAGGTGAATCTTATCCGAGCCGGGGTCCCCAAAATCAACTTTG Gene GeneID:615807|PNLDC1:XM_002690375:40_cdna Constitutive 0 NULL GeneID:615807 9 GENE PNLDC1 NULL poly(A)-specific ribonuclease (PARN)-like domain containing 1 EMBV3_05424 CATACGATGTGTACTTATGATTTTTATGAAGGCCAGGGTCGACTCGATGGAGCACTGTGC Gene GeneID:534937|UPP2:NM_001076043:118_cdna UTR3_Alt 3 NULL GeneID:534937 2 GENE UPP2 MGC140537 uridine phosphorylase 2 EMBV3_28620 AAAGAAGGAGGGCTTGGGATTAGAGCGGAATCTTGGCCTTGCTCTGGGGGTTTCTGATGT Gene GeneID:511120|FAM40A:NM_001075496:80_cdna Constitutive 0 NULL GeneID:511120 3 GENE FAM40A MGC139936 hypothetical protein LOC511120 EMBV3_00566 TGTAGCTCCAGAATTAGACGATCCCAGGCACCTTTAGGGACAAGAGAGAAGGTAGGACTG Gene GeneID:782309|PLEKHF1:NM_001082468:480_cdna Constitutive 0 NULL GeneID:782309 18 GENE PLEKHF1 NULL pleckstrin homology domain containing, family F (with FYVE domain) member 1 EMBV3_29831 TCATCCTGAGCTCCCTGAAATCCCATAGCTCTGAAGGACGACGCAAAGCCCTCTCTACAT Gene GeneID:531097|LOC531097:XM_002693603:101_cdna Constitutive 0 NULL GeneID:531097 15 GENE LOC531097 NULL similar to olfactory receptor 1231 EMBV3_29704 GTTGTCCAGAAAACTAACAGGAATTTACCCTGGATCTCATTTGTCCAAGAGGCTTTGGTG Gene BVT0102_244765 + 0 NULL GK000009.2:84182675-84252441 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237902 TCONS_00237907 TCONS_00237908 TCONS_00237906 TCONS_00237909 TCONS_00237901 TCONS_00237904 TCONS_00237905 TCONS_00237903 1 XLOC_144836 Coding TCONS_00237909 XLOC_144836 Coding Coding SHPRH 9:84250314-84342048 j TSS177752 7327 1 TCONS_00237909_6 1057 0.0282516718984578 31 0.920464827270448 0.000621351361603453 1.15744266335978e-06 0.000354101494318015 8.33814960063794e-08 0.000412937776204297 0.000194349707210067 3.96694993878978e-07 0.000637470252643172 5.93022458582012e-15 0.000139350198225194 1.17404059126949e-08 5.81112649265653e-11 1.15287307358982e-05 1.37365281325691e-22 2.61245524317308e-08 0.000301037819431023 1.25366177671899e-14 0.00107342187676841 1.40892712101413e-10 0.000201856565060522 7.99374925691752e-09 4.21588047673174e-11 1.97939827416819e-13 2.1533827768246e-07 3.24601886453944e-05 0.000144584024868031 3.19003179050076e-05 3.49570515297739e-15 5.15598313689031e-05 1.10996795631113e-17 XM_594787.7 SHPRH PREDICTED: Bos taurus SNF2 histone linker PHD RING helicase (SHPRH), mRNA. 0.0 5707 100.00 0.431691005868705 NM_001042683.2 SHPRH Homo sapiens SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase (SHPRH), transcript variant 1, mRNA. 0.0 4507 90.25 0.452436194895592 TCONS_00237909_6 sp|Q149N8|SHPRH_HUMAN SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; 0.0 2055 94.26 0.984862819299905 3 coding 0 0 0 0 -0.260945789403249 0.200355883103091 0.0529843443118147 0.306516010852499 GACTCATGAAGCTAGGGTTGGAGAAAAGGGGCGGGGCGTCCCGACGTGCGCGTTCACCTTGACCCCACGCTCCAGCGCGCGCCCGGCATCTAGGCGCTGTGGTTTCTGGGCCCCCCGGGAACCCCAACACAAACCAGCATAAAGCGCGCGTGCCCACCTCAGGCCGATGTTCAGTGGATAGCGAATGCGTGCCCGGGACCTGCAGGGGCATCAGAGGGCCCTGGGCCTTGGTGCAGAGAGGCTCTAGGGGCTTGGAGAAACAGTCTAGGGTTCACATTTACCAAGAGAACTTGAGAATGAGCAGCCGACGGAAACGTGCTCCCCCAGTGAGGGTAGATGAGGAAACGCAACAGCAGCTTTGCTGGAATATGCATGAGGACAGGAGGAATGAACCTCTCACCTTAACTGATGATGAGCAATCCTACCCAGGTCTGGACCCCTCTCCTGCTCACCGCATCATCCTAGATGACAGTCTAAAGGAAGAAGTGGCTCACAGAGAAAAGAAGAGATGTTCCAAAGCCGTGAGCATCTCAAAATCAATTGATAAAGAAGAGACTGGTGGCATTTTTTCCCCTTTGTCTGTAAAGCTGAATATTGTAATTTCTCCCTATAACTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTCACTCTTCAGCTTCTTCCTGAACAGTGTTTAATTGAAAATTTTTCTGAAAAGAGTTTTACACTGATGAGTCCCAAGTTGAGCAATCAGTTCCTGATCTATGTTCATTCAGGATGTGAAAATATAGAGAAAAAAGAAAGAGGACTCAATGAGCCAGTCAGTATCTGTGACAAGGGAATTCAAGTGGAGTCGTCCTTCAGCAGTGAAATGTTAGAAGATTTGGAATGGCTGCAAAAGAAGAAAAGAATAAAACTTTACCAAAAACCAGAAGAAAATAACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACCAGATTTTCTGAGTGATGCAAGTTCAAGAATGAAAAAGTTCAATCAACTCATGAAGAGAGTGATGGAAAAACTATACAATTTTATTATTCCAGATGTGTTGGAAGAGGATGAGGAAGGTTCCGATAGTGAGCCAGAGGGACAGGACATTGATGAGCTCTATCACTTTGTGAAGCAGACACATCAGCAAGAAACTCGGTCCATCCAAGTGGATGTCCAGCATCCTGCGCTGACGCCTGTGTTGAGACCATACCAAAGAGAGGCTGTCAACTGGATGCTACAACAGGAGCATTTCAAAAGCACCCCTGCTAGTGAAAATGCCTTACACTTTCTGTGGCGAGAAATTGTTACATCTGAGGGTTTGAAACTCTACTACAATCCATACACAGGCTGCATCATTCGTGAGTACCCAAATGCTGGACCACAGTTGCTTGGTGGGATCTTAGCAGATGAGATGGGTCTTGGAAAGACAGTGGAGGTTTTGGCTCTGATTCTGACACATACTCGACAAGATGTCAAACAAGATGCTCTCACTCTTCCTGAGGGAGAAGTGGTAAATTATTTCATTCCATCACATTATTCTGGCGGAAATGTAAAAAAGACAGAAACCCAGAATATGGAATTTGAACCAAAAGAAAAAGTTCAGTGCCCCCCTACACGTGTGATGATCCTGACAGCTGTTAAAGAAATGAATGGAAAAAAAGGAGTTTCTATTCTTTCCATCTACAAATATGTCAGTTCTATATATAGATATGATGTTCAGCGGAACAGGAGTCTTCTGAAACGGATGCTCAAATGTTTAATTTTTGAAGGCCTTGTGAAACAGATCAAAGGCCATGGTTTTTCTGGTACTTTTACACTGGGAAAGAATTACAAAGAAGAGGATATATATGATAAAACGAGAAAGCAGGCAGTGGGGAGTCCAAGGAAAACTCAGAAAGAATCCAGAAAATCAGGAAACAAGGACACAGACTCTGAATATTTGCCATCAAACACCTCTGATGATGATGATGATCCTTACTATTATTACTGCAAGCCCAGGAGAAATCGTAGTAAATGGAGGAAGAAACCTGTTCCGTCCACAAAAAGGGAAAAAAGCCAGCTGAACATCAGTCTCAACCCACAGGATCACTGTCCACCTACTGTTATCGCTTTGGGTGCATATGTGGTGAACTTGACCAGGTAGACTGTAAGCCTCGTGTTCAGTGCCTGAAATGCCACTTGTGGCAACATGCAAAATGTGTGAATTATGAAGAGAAGAATCTGAAGATTAAACCTTTCTACTGCCCCCACTGCCTTGTTGCAATGGAGCCAGTATCCACAAGAGCAACTCTGATCATCTCCCCCAGTTCCATCTGTCATCAGTGGGTGGATGAAATCAACAGGCATGTGAGGTCATCATCTCTTCGAGTCTTGGTATATCAAGGAGTGAAGAAAGATGGTTTTTTACAGCCTCATTTTTTGGCAGAACAGGATATAGTCATCATTACTTACGATGTCCTCCGTTCAGAACTAAACTATGTAGACATCCCACACAGCAACAGTGAGGATGGGCGTCGCTTAAGGAACCAGAAGCGCTACATGGCTATTCCCAGTCCTCTTGTAGCTGTGGAGTGGTGGAGGATCTGCCTTGATGAAGCTCAGATGGTCGAATGTCCTGCTGTAAAAGCTGCAGAAATGGCTCAGCGCTTGAGTGGGATTAACCGCTGGTGCATCAGTGGCACTCCAGTACAGAGAGGACTGGAAGATCTATTCGGGTTAGTGGTATTTCTCGGTGTTGAACCTTACTGTGTCAGACACTGGTGGGTTCGACTTCTCTATCGTCCTTATTGCAAGAAGAATCCTCATTTCCTCTACAGCTTTATTGCCAAGATAATGTGGAGGTCTGCGAAGAAAGATGTGATTGACCAAATCCAGATACCCCCTCAGACAGAAGAAACCCACTGGCTTCACTTTTCTCCAGTGGAAAGGCATTTCTATCACCGTCAACATGAGGTGTGCTGCCAGGATGCAGTGGTAAAACTCAGGAAGATTTCTGACTGGGCTTTGAAGCTCAGCAGCCTGGACAGAAGGACCGTCACCTCCATCCTATATCCGTTGCTGAGGCTCCGACAGGCCTGCTGCCACCCACAGGCTGTTCGTGGCGAGTTCTTGCCACTCCAAAAAAGCACCATGACAATGGAGGAACTGCTGACATCCCTGCAGAAGAAGTGTGGCACTGAATGTGAAGAGGCGCATCGGCAGCTAGTCTGTGCCCTCAATGGCTTAGCAGGCATCCACATCATTAAAGGCGAGTATGCTTTGGCAGCAGAACTATATAGAGAAGTGTTGCGTTCATCTGAGGAACACAAGGAAAAACTCAAAACAGATTCACTGCAAAGACTTCATGCTACGCATAACTTGATGGAATTGTTGACAGCCAAGCATCCAGGGATACCTCCTACCCTGAGAGATGGCAGACTTGAGGAAGAGGCCAAACAGCTACGAGAGCATTATATGAGCAAGTGTAACACAGAAGTTGCAGAAGCCCAGCAGGCTTTGTTGCCTGTGCAGCAGACTATCCGTGATCTTCAGAGAAAGATTCATTCTAATTCTCCTTGGTGGCTGAATGTGATACAAAGAGCAATAGAATTTGGTATTGAAGAGGAACTTGCTCAAAGAGTGAGAAATGAAATAACCAGCAACTACAAGCAACAAACTGGCAAGCTTTCTATGTCGGAGAAATTCCATGACTGCCGAGGACTTCAGTTCTTACTGACAACACATATGGAAGAGCTCAGTAAGTTCCAGAAGCAAGTGAGAGAGGCTGTAAAAAACCTGGAGGGACCTCCATCTCGGCATGTTATTGAGTCTGCAACAATCTGCCATCTCCGACCAGTCAGACTTCCTCTCAACTGCTGTGTCTTTTGTAAGGCTGATGAATTGTTCACAGAGTATGAGTCAAAACTATTTTCTCACACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATGATAGAAGATGAAGAGGGACTGGTAGATGATCGAATAACTACCACCAACCGTGGCCTGTGGGCAATAAGTGAGACAGAGCGATCTATGAAAGCACTACTGTCATTTGCAAAATCTCACAGATTTGATGTTGAATTCATTGATGAGGGAAGTAATTCAATGGATCTCTTTGAAGCTTGGAAGAAGGAATATAAGTTGCTTCATGAATACTGGATGGCTCTGAGGAATCGTGTGTCTGCTGTTGATGAACTTGCAATGGCTACAGAACGACTGAGAGTCCGTGATCCTCGGGAGCCAAAGCCCAACCCACCAGTTCTTCATATCATTGAACCACATGAGGTAGAACAGAATCGTATAAAACTACTAAATGATAAAGCTGTTGCTACATCCCAGCTGCAGAAAAAGCTTGGGCAGCTTCTTTACCTAACTAACTTGGAAAAGTCTCAGGACAAAACATCAGGAGGTATTAATCCAGAACCTTGTCCAATCTGTGCTCGGCAACTGGGAAAACAGTGGGCAGTACTGACCTGCGGGCACTGTTTCTGTAATGAGTGCATTTCAATTATTATCGAACAGTACAGCGTGGGGTCTCACAGGAGCTCCATCAGGTGTGCCATCTGCCGCCAGACCACATCTCACAAAGAAATCTCCTATGTCTTCACCTCAGAGAAAGCCAGCCAGGAAGAGGACATCCCTGTGAAGGGCAGCCATTCTACAAAAGTGGAAGCTGTGGTCAGAACTCTGATGAGAATCCAGCTTAGAGACCCAGGGGCGAAGGCACTTGTCTTCTCAACGTGGCAAGATGTATTAGACATTATTTCAAAAGCTCTCACTGACAACAACATGGAATTTGCACAGATCAGTCGTGTTAAGACATTTCAGGAGAACCTGTCCGCATTTAAATATGATCCCCAAATCAATATTTTGCTGCTGCCCCTGCACACAGGTTCTAATGGGTTAACTATCATTGAAGCAACTCACGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCCATGAGCTTCAGGCCATCGGAAGGGTGCACCGGATCGGACAGACAAAACCCACTATTGTACACAGATTCTTAATAAAAGCGACAATAGAAGAAAGAATGCAAGCAATGCTGAAAACTGCTGAAAGGAGTCACACGAACCCTTCCGCAAAGCATTCCGAGGCCTCCGTCTTGACCGTGGCTGACCTGGCAGACCTGTTTACCAAAGACACCGAAGACCTTGAATGAAGTACACTTGATTCAGTCCAGACTTTAGTGTATTTTAAATTTTTCATAGTTTATAGAATAAAGTTATAAGTAAAACAATCCAGTAGATGTCAGTAAACACTGTTCTTAGTTGAATGAATTTATCGCTTTTTTGGTTGTACAGTCCAGTAGTTTTTGAGTCCTTTTCAATATACTATTTCCATAATAGCTATCAAGATCTTTAATTTTACACTGCTAATAAAATGTTTGGGCTCCCCAGGTGGCACAGTGATGAAGAATACACCTGCCAATGCAGGAAACACGGGTTTGATCCCTGGGCGAGGAAGATCCCTTGGAGGAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTATAGTCCACAGTGGTCACAAAAGAGTTGGATACCACTGAGCAATTGCACACGTGCACACACACAAAAAAATACTTATTTTTATTCCAAAGAATATCTCTATCTGAGAGAATTAAGAGAGGTATTGTGTACTTTTCTTTCGATAAGATCAGTCTTAAAAAGAAGTTAGAATAAGAGACTAACTCAACTATTCTAGTTTTATATGACTCGGTATACTCAACCAACATAGATCTCATTTTTGGAAGAGCCTTCAGTATCTTTAGCACAGGATTCACCAATATCTTATTAGTAATATTTTTAAAAGATGGTGAATTATATTAGCTCCCAGTTCTTTGAGTAGTTATAGACTGTAACTCCATAAATAGTAACTTCAGAGTAATGTAGCTCCAACAGTAAGTTAATATTAGACAATTACTTCTTTTCTCTGTATCTTGCTACTAAAAATTGAAACACTGAACACTTTAAGTATTTCTATTATATGTTAAGTATTATCAGTGTAAACGTAGTTTTATTAAGTGTATTAATGTTTAATTAAAATTATCTGTTTTCTCTACTTTTAATTTGTGTTACTAAATGTTTACGTTTTAAGATTGATCTGTAAATATTGCAGTGTCTATAATTTCAGTTTTTATGATTATAACAATATGGCAGGGTTTTTTTGTGTGTGTTTTTTTTTAACCATTATTACATACTAATGTCTTAGATTCTTTTTCTTTCCTATGTTCTTGTGTAACTAGACTTTTTAGCCACTAATATCTAAATTTATGATAGGGTTTGTTATTTCATTCCACTAGTACTTCCCTCAAGGATTAGCATTTGATCTTTGTAACAAGAGAATGTCATATTCACAGAAGCAAATAATTGCAAGTGATAATAACCCAGTGTTTCTTCTGTGAAGAATTAATGGACTTTGAAATTGTTAAATAAGGAGTAGCTTGTTGTATCCTAGCCATTTGATGTAATACAAGTGTTCTTGATTTATTTTCTTTGAGCCTTCAGAGTTTCAAATGACCCTCAGGACTCATTAACTCCTACTTAGTTGTCCAGAAAACTAGCAGGAATTTACCCTGGATCTCATTTGTCCAAGAGGCTTTGGTGCTTAGTTAAGGTGCATTTTCTTATTCTGGTTTATAGAGTGACATATCCAACTGAAGAAAACACACACACACTTCTGGTGCTTATTCTTCAGTTGAAGGAAGATATGCATTGATTCTTTTATATGAAATTAGACAAAACTATTATTTTTGTAGCTCTTTATGTGTTATAAAGAGCTTTCCTATACATTTATGTGTTTAATTTGCCCACCAGTCCTGTGAAGTTGATGAAATTTATAACATTCCTGTTTTAAAAGTGGAGAAGTGAGATTCAGAAATACTGAGAAATATGCCTATGACACATAGCAAGTAAACAGTGGAGCCCAGGTCCTTGGCTCCAAATCTCATGTTCTTTCTCTAAATCATAACTTGCTGCAATTCAGAAGGCCCTTGGTTCTAATTTAATGATGAACATGTTTCAGTATTTCTTTCTGTTTCCTAGTATTCTTTTTTGCGCTACAGTTTTAGGGAAAGTAATTTGATAATGCTTCAATTTTGTATAAAGAGAAATATAAAAATATAAATAGATAAATATACCTATCTGTATTAGAGAAAAACTGCTCTTATTTATTTCTGTAAAATGTCATCAATTAAATAAATATTTTAGTGTAAATTGAAATTCGGGCATTTATTAAATTTCTGATCCATAGA EMBV3_26647 GAGAATATTCCAGGTTCAACTCCAGGATCTCCTGTGCATCTCCAGGGTCTATGCAGACTC Gene GeneID:515820|SH2D3C:NM_001098039:100_cdna Constitutive 0 NULL GeneID:515820 11 GENE SH2D3C NULL SH2 domain containing 3C EMBV3_10218 CATCAGGGACCTATTTATCTGCACAGCAAGGCAAAAGAAGCTGGAGCAGATGACATTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17828 ACCAGTTCTTGGCTCTTTGGACACTCATAAAACAAGTCCTGAAATATCCACCGCCCCCGC Gene GeneID:529071|PAPOLG:NM_001098066:137_cdna Constitutive 0 NULL GeneID:529071 11 GENE PAPOLG NULL poly(A) polymerase gamma EMBV3_14802 CTATGTCACAGCCTTCAACGGGGAGCTTGAGGACTACATGAGTGAGCGGGTCCAGTTTGT Gene GeneID:616905|XRCC1:XM_002695077:494_cdna Constitutive 0 NULL GeneID:616905 18 GENE XRCC1 NULL X-ray repair complementing defective repair in Chinese hamster cells 1 EMBV3_08532 CTGAGAGTGATCAAGTAAACCCAAGCACCTAGACAGTAAAACTGTTACCTTTTGTGGCCC Gene GeneID:523482|GPR128:NM_001083702:14_cdna Constitutive 0 NULL GeneID:523482 1 GENE GPR128 MGC138924 G protein-coupled receptor 128 EMBV3_00678 GAAGAACACTGCCAGGGCGGGCACCAGCAGGGAAGAGCATTCCAGTTCCTGAAAGCAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21358 TGACCAACGTCTGAGTCTTCAGCTATGTTGGCGACTTTATATGGGCACACTCGGAATCTG Gene BVV0101_063481 + 1 EMBV3_39804 GK000011.2:4058852-4173048 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023817 1 XLOC_014366 NonCoding TCONS_00023817 XLOC_014366 NonCoding NonCoding - 11:4140249-4141249 - TSS17632 662 2 TCONS_00023817_1 38 0.104229607250755 3 0.34034034034034 0.00019867326070801 0.000151789062339128 0.000475281419308929 8.78083067963536e-05 0 7.29463016881283e-05 0.00071354754133623 0.000321645731312762 0.000238372945669513 0 0 0 0 0 0 0 0 0 0.00015165111980248 9.77687684321522e-05 0.000385197922778933 0 0 0 1.04659727920821e-05 3.192809863012e-05 0 0 0 0 XM_005205827.1 NUB1 PREDICTED: Bos taurus negative regulator of ubiquitin-like proteins 1 (NUB1), transcript variant X1, mRNA. 4e-10 69.8 84.62 0.0966767371601208 0 noncoding 0 0 0 0 -0.018708942767821 0.87931892008065 -0.0199980259300938 0.672194981379062 ATTGTGTGTTTGAGTAAAAGTAAAAGTTGTTTTCTATATAACCTTGTGTGTCCGGGGAGTCTCCAGGCTAATTCGTGGGATGAATCATTGTTGTGACACTGCAAACGGGGAAGAAAGGCTGCCAGCGGCCTCGCAGCCTCTCCTTACTTTCTTGTGGAGACCCGCCGGTCCAGGGAACGGAGGCCACTGCTGCTGACCCTTGAGAAGCTTCCATGCCAGCTAGAAGAGCTCATGCTAGTAGCACATCGATTGATGACCAACGTCTGAGTCTTCAGCTATGTTGGCGACTTTATATGGGCACACTCGGAATCTGCAACACATTTTAGGTGGTGGGTTTGGGGATTTTCCCTGCAGGCACTGAAGACCCAAGAAGCTCGTGTTTGTACCTCTATCTGCAAAGAGCCAGGGGAGAAGCTTGGAAGGGTCTCTCTCCACTCTTGGCTTTAACTGGAGCAAAATCCCAAATAAAAGCGTCAGAGGCAGGAGGAGCCTGGCGGGCTACATACAACCCATGGGGTCATAAAGAGTTGGACGCGCTGAAAGCAACTGAGCACCTCAGGGCACAGAAAGAAGTTAAAGACAGATCGCAGTTATTTGAGCAAATAAAGAGAAGTTTACTTATGAAAATAAAATTTGTATAATCCCTTTGGAATAAACCATTC TCONS_00026705 r 5' 1648 TCONS_00026705 r 5' 1648 EMBV3_08848 CAGGATGTTCTCCAAGAAGCCGCACGGGACGTGAAGAAGTCTACCCAGAAGGTGCTGGAT Gene BVV0102_106558 + 0 NULL GK000021.2:46270834-46441408 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21240 TTCAGTAGTTTTGGCAGATGGGCTTAGTTGCCCCACGACATGTGGGTTCTTCCTGGACCA Gene BVV0102_211974 + 0 NULL GK000016.2:62331509-62462614 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29670 CAAGAGCCAGCGGTGGACTGGGGAGAGGAAATATGGCTGACTTCCGGAAGTGTTTTGCAA Variant GeneID:507347|SIRT5:NM_001034295:56_cdna 99^231 2 EMBV3_33046 GeneID:507347 23 GENE SIRT5 MGC128489 sirtuin (silent mating type information regulation 2 homolog) 5 (S. cerevisiae) EMBV3_41906 TTGCGGATATTGAAGAATCCTTGCATCCCTGGGATAAAGCCCACTTGGTTATGGTGTATG Gene BVV0101_032106 + 1 EMBV3_07631 GK000013.2:48711088-49550049 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007479 TCONS_00240570 TCONS_00116668 TCONS_00152751 TCONS_00124122 TCONS_00238892 TCONS_00174964 TCONS_00179481 TCONS_00233446 TCONS_00071338 TCONS_00152649 TCONS_00224115 TCONS_00032585 TCONS_00177993 TCONS_00048823 TCONS_00021453 TCONS_00135549 TCONS_00107167 TCONS_00115689 TCONS_00207066 TCONS_00250727 TCONS_00116119 TCONS_00208545 TCONS_00110347 TCONS_00253076 TCONS_00021578 TCONS_00250238 TCONS_00251888 TCONS_00223458 TCONS_00175068 TCONS_00242132 TCONS_00098382 TCONS_00254568 TCONS_00007449 TCONS_00031044 TCONS_00007556 TCONS_00162777 TCONS_00152716 TCONS_00117117 TCONS_00218764 TCONS_00157711 TCONS_00141423 TCONS_00136862 TCONS_00031912 TCONS_00031937 TCONS_00179125 TCONS_00186815 TCONS_00251853 TCONS_00124128 TCONS_00185929 TCONS_00238441 TCONS_00135700 TCONS_00020398 TCONS_00020725 TCONS_00073275 TCONS_00218860 TCONS_00240473 TCONS_00250529 TCONS_00251931 TCONS_00040338 TCONS_00200213 TCONS_00039852 TCONS_00022063 TCONS_00021597 TCONS_00233374 TCONS_00206425 TCONS_00040696 TCONS_00156738 TCONS_00208725 TCONS_00207276 TCONS_00111564 TCONS_00206407 TCONS_00142125 TCONS_00115730 TCONS_00071042 TCONS_00130587 TCONS_00037883 77 XLOC_003040 XLOC_147234 XLOC_070834 XLOC_092516 XLOC_075674 XLOC_145558 XLOC_104747 XLOC_109253 XLOC_142928 XLOC_043109 XLOC_092414 XLOC_137411 XLOC_018825 XLOC_107766 XLOC_028954 XLOC_012126 XLOC_081772 XLOC_063078 XLOC_069858 XLOC_125585 XLOC_153670 XLOC_070288 XLOC_127058 XLOC_066251 XLOC_156017 XLOC_012251 XLOC_153181 XLOC_154829 XLOC_136758 XLOC_104851 XLOC_148796 XLOC_058628 XLOC_157500 XLOC_003010 XLOC_017293 XLOC_003117 XLOC_099658 XLOC_092481 XLOC_071283 XLOC_132083 XLOC_096166 XLOC_085851 XLOC_083073 XLOC_018157 XLOC_018182 XLOC_108898 XLOC_112866 XLOC_154794 XLOC_075680 XLOC_111982 XLOC_145108 XLOC_081923 XLOC_011075 XLOC_011400 XLOC_045040 XLOC_132179 XLOC_147137 XLOC_153472 XLOC_154872 XLOC_024154 XLOC_121865 XLOC_023669 XLOC_012734 XLOC_012270 XLOC_142856 XLOC_124947 XLOC_024512 XLOC_095198 XLOC_127237 XLOC_125794 XLOC_067464 XLOC_124929 XLOC_086550 XLOC_069899 XLOC_042815 XLOC_079295 XLOC_021712 Coding TCONS_00250529 XLOC_153472 NonCoding NonCoding - X:42049161-42049949 - TSS187750 788 2 TCONS_00250529_3 84 0.998730964467005 1 0 1.23329418163439e-06 2.12531113965679e-06 0 0 6.26545040596956e-07 0 0 0 6.67523325166044e-06 4.35119628198308e-06 2.42088161611916e-07 1.90482584342807e-06 0 0 6.22613039246579e-06 0.000101059326334391 0.00420368112349935 3.4494691549136e-05 0 2.01536441530632e-05 0 5.34043566966198e-06 8.47939890028698e-05 4.80296153052119e-05 0 0 1.85886414756489e-06 6.0946592308444e-06 3.69640008818258e-06 0 NM_001206364.1 SLAMF6 Bos taurus SLAM family member 6 (SLAMF6), mRNA. 6e-53 212 83.17 0.253807106598985 NR_047679.1 UGDH-AS1 Homo sapiens UGDH antisense RNA 1 (UGDH-AS1), non-coding RNA. 5e-111 405 76.51 0.700507614213198 0 noncoding ATTTCTGTGTGTTGATTTTATATCCTGCAACTTTACTATATTCATTGATTAGCTCTAGTAATTTTCTGGTGGAGTCTTTAGGGTTTTCTATGTAGAGGATCATGTCATCTGTAAACAGAGTTTTTTCTTTTCCAATTTAGATTCCTTTTATTTCTTTTTCTGCTCTGATTGCTGTGCCCAGAACTTCCAAAACTATGTTGAATAGTAGTGGTGAAAGAGGGCACCCTTGTCTTTTTCCTGACTTTAGAAGAAATGCTTTCAATTTTTCACCATTGAGGATAACGTTTGCTGTGGGTTTGTCATATATAGCTTTTATTATGTTGAGGTATGTTCCTTCTATTCCTGCTTTCTGGAGAGTTTTTATCATAAATGGATGTTGAATTTTGTCAAGGCTTTCTCTGCATCTATTGAGATAATCATATGGTTTTTATTTTTCAATTTGTTAATGTGGTGTATTACATTGACTGATTTGCAGATATTGAAGAATCCTTGCATCCCTGGGATAAAGCCCACTTGGTCATGGTGTATGATCTTTTTAATGTGCTGTTGGATTCTTTTTTTTTTTTTTTTGTATTCCTATTTTTTTTTTTTATTTTTTATTATTTTTTTTTTGGATTCTGATTGCTAGAATTTTGTTAAGGATTTTTGCATCTATGTTCATCAGTGATATTGGCCTGTAGTTTTCTTTTTTTGTAGCATCTTTGTCAGGTTTTGGTATTAGGGTGATTGTGGCCTCATAGAATGAGTTTGGAAGTTTACTTTCCTCTGCAATTTTCTGGAAGATTTTG TCONS_00244277 . 3' 38144 TCONS_00244277 . 3' 38931 EMBV3_36614 CATCCGGGAAGAATATAGGAACAAATTACTGGAAGCTGAGCGCCTAAGGCTGGAGGCTCA Gene GeneID:528523|LOC528523:XM_002707840:7_cdna Constitutive 0 NULL GeneID:528523 9 GENE LOC528523 NULL similar to hCG1812738 EMBV3_36188 ATCCCTTTGGTGAAACTCCAGAAGGACAAGTTAATGGTGCTGGACTCGCCATGGCTACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34358 GTACAAGCTGCTTCCCAGTGGAGAGATGATTTACCTTATTGGTCAGGTTTCTTCTGGCCA Gene GeneID:616138|LOC616138:XM_002690548:96_cdna Constitutive 0 NULL GeneID:616138 10 GENE LOC616138 NULL similar to TRD@ protein EMBV3_36936 AGAAATCACAGCTGGCAGAGGCAACCTCCATGTGAATGAACATCAGCAGATCAGAGTGCC Gene GeneID:614096|ELOVL7:NM_001078042:21_cdna Constitutive 0 NULL GeneID:614096 20 GENE ELOVL7 MGC143441 ELOVL family member 7, elongation of long chain fatty acids (yeast) EMBV3_12918 GGTCCCTCATTTAACATTCTATGGGCACTATGGGGTTGTTTAAGAAGGCAAAGGGGTCTG Gene BVT0102_045448 - 1 EMBV3_28123 GK000019.2:27978471-27985493 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093101 1 XLOC_057078 NonCoding TCONS_00093101 XLOC_057078 NonCoding NonCoding LOC100847753 19:27965621-27980251 = TSS69928 1053 2 TCONS_00093101_2 96 2 0.92815640166792 0 0 0 0 0 0 0 0 0 3.90740141039224e-06 3.04355206115733e-05 0.00152467474907552 5.44971869147342e-06 0 3.89497443736197e-06 0.000250822184368741 0 0.000381248128118331 0 0 0 0 0 1.59208411739814e-05 0 0 0 5.47303642652818e-05 4.61026255377436e-06 0 NM_001678.3 ATP1B2 Homo sapiens ATPase, Na+/K+ transporting, beta 2 polypeptide (ATP1B2), mRNA. 0.0 657 79.47 0.681861348528015 0 noncoding 0 0 0 0 -0.151691224078384 0.35019091732919 -0.000510781999085094 0.991510345188889 ATTTAATTAATCCGCTGTCCCCTCCCCTGTCTCCCACACCTTCTGCCTTGTCTACCACAGTCGCTGTCTCAGTGGCTTTTGACTTGTGTGACTCCTTGGTCAGTCTTTCCCCACTTCTCTATCCCCATTCCCTCCACTGAAAGCGGGACCACTTGTAACTGAAGACATGATGGCTCTGTGGCCTTTTCCTTCTTTCCTGGCACAGCTGGTTTCTCACTCCACGTTGAATACGTGAGCTGGGAATGAAGGTCTGAAAGAAAAATCCCTGTTGATTCTTGAAAATTCTCTTCCTGGTCTCCTATCACGCCTCAGAGGGGCGGGGTTGACCTAGGCTGAATATGCACTTTGTTTTTGCCGATGGCTCCCTCCCCTCTGTTCCCTTTCCCAGAATATCCTGCAAGTTCTACTTCCCAGGCGCCCTGGGGGAGGGGCAGCCACTTTGGCTGGGTCCCCAGTGGCCACCTTGGAAACGTCAGCTGGTTATGGGACTATTCCATCTCCTTCCCCTCCGCCCAGATCTGCTCCCCCACCCCCATCCTCTCTGTGGCTTCTCTTAGCAAGTTATCAACTAATCACAAACTAACTCCTCCCCTTTCTTCCGCATGCCAGCCTGAAAATTGCAGATACCTCCTCCTTTTAAGACTCTGAATTTCTTGGCTCCATCTCCTTCAGACCCCTTTGCCTTCTTAAACAACCCCATAGTGCCCATAGAATGTTAAATGAGGGACCTTCTGTGTTCTTGAGTTATAGAGGCATTTTAACTCTTTCTTCTCCCACGCCCTTCACTTCCCCACCTGTAATTTCCCTGTTCTTTTTTGATGCTGCAGCTTCCACACCCCACCCATGGGTGGACCCTTCCCTGTTTTTCTCTGACTGGATCTGAGGCTCTTCCCTTTGGATCCCATTGTTTTCCTGCACTCCCCTCACCCAAGTGGTCTCTCTTTGCAGTTATTTAATGCCTGTGTCTGATCTACTGTAAAAAGAGGATAAAGTACAATAAAATGAGAGCAATTATATATATATATATAAAAATATATATATATCATACATGGA EMBV3_13093 AGAAGCTTTTCTTGCTGGCGTGCGACAAGGTCCGCAGATGCACTTTTGGTGGCAATCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41966 ACTCGGGCCGGGACTTCCTGACCCTGCACGTCTCCATCGAGGACATCCAGGAGGTGCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43666 GAACATTATGATCCAGAAACACGATGGCATCACAGTGGCAGTGCACAAAATGGCCTCTTG Gene GeneID:516090|HBXIP:NM_001034517:107_cdna Constitutive 0 NULL GeneID:516090 3 GENE HBXIP MGC128113 hepatitis B virus x interacting protein EMBV3_04034 GGGAAGCGCGGCCCGGAGGGCGGATTCGAGAACACAAGCATTAAAATCACGATGAATGGT Variant GeneID:538419|EPS8:NM_001076102:47_cdna 228^301 2 EMBV3_37544 GeneID:538419 5 GENE EPS8 MGC137738 epidermal growth factor receptor pathway substrate 8 EMBV3_01914 TGCCAACACGCTGGCCGGGAAAAGGACTGGTGGGCTGCAACATTTTTCCATTGCAAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05484 TGTGCCACCTCCCCAACAATGCCAGCAGAAGTGCCCACCCAAGTATAAGTAACAGCATCA Gene BVV0102_282121 + 0 NULL GK000003.2:17557947-17774233 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168834 TCONS_00172265 TCONS_00172262 TCONS_00172263 TCONS_00172261 5 XLOC_103204 XLOC_104083 XLOC_104081 XLOC_104082 XLOC_104080 NonCoding TCONS_00172262 XLOC_104081 NonCoding NonCoding LOC100848603 3:17721684-17723158 = TSS128354 705 1 TCONS_00172262_1 64 2 0.522742701968771 1.51174472660068e-05 7.83920551899641e-06 1.36366958411377e-05 1.29568376052845e-05 1.18736572559938e-05 8.90595487415734e-06 3.44663385125843e-06 6.71173502843389e-06 6.71501467852289e-06 0.0030795888614974 0.000670083101576524 0.000985044852798479 0.000176362426920523 5.44165653874052e-05 8.96965751919084e-05 0.00152974665964528 7.45728222366386e-05 3.72211467633916e-05 2.41412581457519e-05 0.000297177987988138 1.27744296264708e-05 0.00034360747531796 0.000633075271848886 0.000491114527882663 1.57500747154068e-05 1.37530654494806e-05 1.68987649778627e-05 0.000966551027004883 0.000736456459630895 0.00216572731291058 XR_139247.2 LOC100848603 PREDICTED: Bos taurus uncharacterized LOC100848603 (LOC100848603), 0.0 1252 100.00 0.982978723404255 NM_005988.2 SPRR2A Homo sapiens small proline-rich protein 2A (SPRR2A), mRNA. 7e-77 291 73.67 0.66241134751773 0 noncoding CTGCTGCATCACTGCCATCCTCCTGCTACTCAAGTCCGGATAGCTTTTGGAGAACCTGATTCTAAGACTCCAGAAAGATGTCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGCAAGCAGCCCTGCCAGCCACCTCCTGTAGTATGCCCTCCCAAGTGCCCTGAGCCCTGCCCACCTCCAAAGTGCCAGCAGAAATGCCCTCCTGTGCCACCTCCCCAACAATGCCAAGAGAAGTGCCCACCCAAGTGCAAGTAACAGCATCAGCTTTTATCTGGATCCGGAAAGGATGAGGACAACTGGCTCACCTAGCTCCACAGCTCCACCTTCATCTTCTCTTTAAAGCCTATCCTGGATACAGAAGAAGCTTCTCCACCCTTCAGCCGGCAGTATGCCTGTGGTGATTCCTGACTGCCAGAGGTTTCCTTCCTGAGGCTGCTACAACACTTGCCTCTGGGAAGACAGCTGAGAAAACACAGTGCTTCAGAGGGAAGAGCAACAGCTCTCCTCCTGGACACCATCAGAAGATTCTTTCCCTGTCTTCTGTGTCTGTCTGTCACCTGGGCAGGGGTTTCTACCAACTAAACAACTGTTACTTGTTCTCCACTTTCTGAATAAGCTACAATTCTCTTTTGTGATGGTAAAAAAAAAAATTTTTTTTTTCCTATTAAAAGCACTTACAGCCATAGCA EMBV3_15873 TTGCAGCAGCAGGAGGAGGACCGCAGTAAGACCACACTGCCCACGTTTCAGAGCCCAGAG Variant GeneID:514423|SNX5:NM_001034464:49_cdna 176^280 1 EMBV3_04795 GeneID:514423 13 GENE SNX5 MGC128439 sorting nexin 5 EMBV3_39662 TGGGCTGGGTGGAAATGACCGACTTAAAAGTCAGTGTCGGCCCTGGTGGACAAGTTTAAG Variant GeneID:504477|NCAPH:NM_001034213:29_cdna 908^999 1 EMBV3_19604 GeneID:504477 11 GENE NCAPH BRRN1 MGC127159 non-SMC condensin I complex, subunit H EMBV3_18200 TAACTACAGGCTTCAGGGGTCTCAAGGTGGGTCTGTATCTCTGCCTGGGTTTTTGCTTGG Gene BVV0101_047561 - 1 EMBV3_31585 GK000030.2:57926732-58029072 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19687 AGTTTCCCAGAAATCTTGAGTGGGAGGAGAAAGCCCAAAAGTGGAGTTGCTCTGAAGTTA Gene GeneID:516241|LOC516241:XM_002687241:63_cdna UTR3_Alt 3 NULL GeneID:516241 5 GENE LOC516241 NULL similar to cysteine sulfinate decarboxylase EMBV3_08866 TGGCCGAGTACACAGGTCCCAAGCTGTTTAAGGAGCCCAGCAGCAAATCCAACAAACCAA Gene GeneID:506553|CAMSAP1:XM_002691656:391_cdna UTR3_Alt 2 NULL GeneID:506553 11 GENE CAMSAP1 NULL calmodulin regulated spectrin-associated protein 1 EMBV3_42698 CTGTTGAGTCATGGCAAAAAACCCTTCAGTAAGCATGTGAGGAAGCTGCGTGCCAGCATC Gene GeneID:618220|LOC618220:XR_083644:559_cdna Constitutive 0 NULL GeneID:618220 3 PSEUDO LOC618220 NULL similar to ribosomal protein L6-like EMBV3_34845 CTCTCCTGTGTACTACTGCTTAGGGCAGATTAAACTACAGATATTGATGTCCCCAGGGAG Gene GeneID:783300|LOC783300:XM_002699990:86_cdna UTR3_Alt 1 NULL GeneID:783300 X GENE LOC783300 NULL hypothetical LOC783300 EMBV3_14695 GGATGCTGCTACGCCAGATGATCTTCATCCCTGAAGTTTTCAACTAAACTTGGTTTCCTA Gene GeneID:519882|SPRED1:XM_002690783:205_cdna UTR3_Alt 2 NULL GeneID:519882 10 GENE SPRED1 NULL sprouty-related, EVH1 domain containing 1 EMBV3_09189 GCATGGAAGAATGAGGTCAAGGAGAAAGGCCACGTCAACTGCCCCAACGATTGCTGTGAA Gene GeneID:614014|LOC614014:XR_084576:335_cdna Constitutive 0 NULL GeneID:614014 13 PSEUDO LOC614014 NULL similar to Zinc finger protein 512B EMBV3_00038 AGCTGCAGGACTACGCCCCTGACTACCAGCACAAGTTCAGCTTTGACTTCATGCCCACAT Gene GeneID:539358|RTN4RL1:XM_002695686:228_cdna Constitutive 0 NULL GeneID:539358 19 GENE RTN4RL1 NULL reticulon 4 receptor-like 1 EMBV3_09093 CTACTCATTCAGGCATCAGAGGACACCTTCAGACCATAGACCACATCTTTCCTCTTGCCC Gene GeneID:527601|LOC527601:XM_002691799:434_cdna Constitutive 0 NULL GeneID:527601 12 GENE LOC527601 NULL similar to FRAS1-related extracellular matrix protein 2 precursor EMBV3_21313 AGCGGTTGTCTCAGGGAGGATGCAGGCAAAGATGCAAGCCAAGAGGAACTCGGAGACAGA Gene GeneID:540500|GALNT14:XM_002691444:139_cdna Constitutive 0 NULL GeneID:540500 11 GENE GALNT14 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) EMBV3_09761 TACTGAGGCTTGATTTGTGGCCCAAGATGTGGCTTATCCTGAAGAATGTTCCATGTTCAC Gene BVT0101_003656 + 0 NULL GK000030.2:97971451-98101929 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22344 ACAACAGAGACAAGAACAAGCAGGAAAAAAGTTCAAAGTTCTGGCTAACCAGTACAAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42621 ACCTGGTGGAGAAAAGGAGGGTCCAAAGGGAGAGAGAGCAGTCAAGCCAGTAATCTCACT Gene BVV0102_103772 + 0 NULL GK000026.2:37226739-37282718 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39339 GCTGCGGATCACAGCAGGACCTTGTTTCCTCTGTTCTATCCGTATCTTGTCAGAGTCCAT Gene BVT0102_076329 - 0 NULL GK000006.2:109164085-109224625 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38947 GCCATCTCAGGTTATGCAGGCTTTGTCCCTCGGTTTGCCTGGGTGATGGGGATGAATTAT Gene GeneID:618445|LOC618445:XM_002691681:94_cdna Constitutive 0 NULL GeneID:618445 11 GENE LOC618445 NULL similar to CG18335 CG18335-PA EMBV3_26626 TGGGGTAGACTGCTGGATCGACAACACCAGGTTATATGCACACACTGGTACAGAACCTGG Variant GeneID:510960|LCAT:NM_001046069:195_cdna 328^443 2 EMBV3_42879 GeneID:510960 18 GENE LCAT MGC137397 lecithin-cholesterol acyltransferase EMBV3_09498 CGGGGCATCCTCTGGTGCTCACTTGCCCAGGTCTCAGTCCGCAGTGAGGAACAAGAATTA Variant GeneID:768084|ZSCAN12:NM_001077138:40_cdna 121^607 3 EMBV3_01866 GeneID:768084 23 GENE ZSCAN12 MGC139538 ZNF96 zinc finger and SCAN domain containing 12 EMBV3_13791 GCTGAGAAGCTCCATCAGGCCATGAAGGGTATTGGAACTCGTCATAAGACACTGATCAGG Gene GeneID:327662|ANXA1:NM_175784:14_cdna Constitutive 0 NULL GeneID:327662 8 GENE ANXA1 NULL annexin A1 EMBV3_13356 AACCTTCGGGCGGTCATCCAGGTGTCGCAGATCCGTGTGAATGCAGTCAACCCCACGGTG Variant GeneID:526937|DCXR:NM_001075891:108_cdna 403^567 2 EMBV3_11856 GeneID:526937 19 GENE DCXR NULL dicarbonyl/L-xylulose reductase EMBV3_14032 TCGCTATGTAGCCATCTGCAAACCCCTGCATTACACAACCATCATGAACGACAGAGTCTG Gene GeneID:788258|LOC788258:XM_002687491:365_cdna Constitutive 0 NULL GeneID:788258 5 GENE LOC788258 NULL similar to olfactory receptor Olr1012 EMBV3_05928 AAATACCTGTATCTGCTCTTCTCCGACGACCCCGACCTGCTGAGCCTGGACACCTACGTG Gene GeneID:100336900|LOC100336900:XM_002691710:78_cdna Constitutive 0 NULL GeneID:100336900 11 GENE LOC100336900 NULL CG11874-like EMBV3_18730 GGAGTTCTAACCTTTGGAGTTGAGGATGACTTCCGAGTTTTTGGCGAAGAAGCATCAGGG Gene BVV0101_025714 + 0 NULL GK000011.2:254158-266355 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026550 TCONS_00026551 TCONS_00026553 TCONS_00026549 TCONS_00026552 TCONS_00026555 1 XLOC_015062 Coding TCONS_00026555 XLOC_015062 Coding Coding TMEM87B 11:263963-322713 = TSS19025 4875 1 TCONS_00026555_3 595 0.008 20 0.917360295494391 2.21092672557846e-21 1.80275017823368e-05 5.76916904655923e-11 0.000115502971890103 2.78126994701371e-09 4.58612287007939e-05 3.49173342548087e-08 4.84879773255786e-06 0.000115020001336076 5.91674052384041e-07 6.92321740735405e-12 8.79241281625711e-09 1.60213879620746e-09 2.6959687116685e-19 2.12513385441576e-11 6.66837582784111e-06 0.00510385110497003 0.00417688645193693 1.12949384122982e-09 4.07241423841111e-09 1.12372964059501e-17 0.000731773316068685 0.000934896405636868 0.000526146458163562 1.68113848538993e-06 9.32734697561018e-05 5.89147949115116e-09 8.23736809398575e-06 4.1641058499506e-05 0.000499375515691041 XM_002691155.3 TMEM87B PREDICTED: Bos taurus transmembrane protein 87B (TMEM87B), 0.0 8747 100.00 0.994666666666667 NM_032824.2 TMEM87B Homo sapiens transmembrane protein 87B (TMEM87B), mRNA. 0.0 2322 83.01 0.459897435897436 TCONS_00026555_3 sp|Q96K49|TM87B_HUMAN TM87B_HUMAN Transmembrane protein 87B; 0.0 970 85.64 0.93109243697479 1 coding 0 0 0 0 -0.092641312184326 0.526516420145647 0.0622032044631271 0.297182523941482 ATGGCTTCTAGAGAAGAGGCCTATGGACTTCCTGGGCCCGAACCCGCCTCCCGGAGGCGGGCCTGCACCCGGTGCGGGCTCGCGGTGCGGCGGATCGCCAGGTGCGGCTTCCGCGTAAAGATGGCTGCCGTCTGCCGCGACGGGGTCTGGCTCCCGCCCCGCCGCCGCCTTCCCGCCGGGCGCCCGCTGCTCTGCTTCGCCCTCTGCCTCCTGTGCTGCGGCCCAGCGGCTGTGGGCGCCGTCCCCGAGATCGGGCTCTGGACCGCGACGATCAGTGACAAATCAGGACCTTTGATATTTAGGAAAACTATGTTTAACTCTACTGAGATCAAGTTTTCTGTTAAGTCATTCAGTTGTCCCAGGACTGTGAAGTTTACCATAGAGTGGCATTTGGAGCATCATACCTGTCACAATGACTATTCTGAGTTGGAAGAGCTGTCACAGAAACATGAACTTCCCGTCACTGAAGACTTTTGTGGCCATTATTTCAAGAACAGTGAATGCTGGACAACAAAAAATGAAAATGTAGAGTGCGGCGGTGATTTACAGCTGTTTCCCCCACTGAATAATAAACAATTAATATCAAATACTGGAAATGTCTCAAACCAGGAAGGATCAACAGATGTTGTAGCCAAAACACAAAGAGATGGATTTCATATCTTTATTGTTTCTGTTAAAACAGAAAAAACAGATGCAAGCTGGAATTTGAACGTTTCTCTTTCTATGTTGGGACCTTATGGATATATCTCTGCATCAGATTGGCCTCTAATGATTTTCTACATGGTGATGTGTATTGTTTATATCCTATATGGTGTTCTGTGGCTGATGTGGTCTGCCTGTTACTGGAAAGATATATTAAGAATCCAGTTCTGGATTGCAGCTGTTATTTTCCTGGGAATGCTTGAAAAAGCAGTTTTTTATGCTGAATACCAAAACATCAACAGCACTGGGCTATCAACTCAAGGGTTACTGATATTTGCGGAGTTGATATCTGCGATTAAGAGGACTCTGGCTCGCCTCCTGGTGATCATCGTGAGCTTGGGATACGGCATCGTAAAGCCTCGTCTAGGAACCGTCATGCACCGGGTCATTGGATTGGGGGTTCTTTATTTTATCTTTGCGGCTGTTGAAGGCGTGATGAGAGTCATTGGGGGTTCTAACCATTTAGCTGTTGTCCTTGGTGACATCATTTTAGCACTTATTGACTCCATTTTTGTATGGTTCATTTTTATAAGTTTGGCACAAACTATGAAGACTCTCAGGCTAAGAAAGAACACAGTAAAATTTTCTTTATACAGGCACTTTACAAATACCCTCATCTTTGCCATACTGGCATCTGTAGTGTTTATGGTGTGGACAACTAAGACATTTAGGTTTGCAAAATGTCAATCAGACTGGATGGAACGCTGGGTTGATGATGCATTTTGGAGCTTCCTTTTCTCACTTATTCTTATTGTAATAATGTTTTTGTGGAGACCATCAGCAAATAATCAGAGATATGCCTTCATGCCTTTAATAGATGATTCTGATGATGAAATTGAAGAATTCATGGTAGCATCTGAAAATTTAACTGAAGGAATAAAATTAAGAGCCTCAAAAACAGTTTCCAATGGAACAGCTAAATCTGCTACTTCTGATAATTTTAGTGAAGATTTGAAATGGGTGGAGGAAAATATTCCCTCTTCATTCACAGATGTAGCTCTTCCAGTGTTAGTGGATTCAGATGAGGAAATTATGACCAGATCTGAAATGGCAGAAAAAATGTTCTCTTCCGAAAAAATAATGTGATGGAACCCAAGAATGATGAAGGACTTCCTCAAGACTAAAAGAGAACTTTGTTTTGATATAGTGCAACAAGTTTTTATTGCATCATCTTGGAAATCTGTGTGTGAAAATTAAGAATTCAGATGGTAGGAGGGTTCTGTGGCCCTTTTTAATCTGACCCCTGAGTGCCAGTTTCATGTCCATTACATTGCCTACTTGGCAATGATCTGAGAGAAGTATTATAATAAAGATAGGTTCCCAGCTACCCTTAGCTGATGGGTGGCAGACATGTGGATTTGGGCATGTGGGTTCTCTCTTTTTTTTTTTTTCTGAAAAATATGACAATTTAAAATAACTTACTTACATCAACGTTCCTATTGTTCTTTTGCTGAGCTTCAAAACAGTGATATGATTCTTCTGAGATGTGGTTAAATCAGTGTCTCCATCTATTGGGTTTATAGTTATACGTTGCAATAATAATTCTCTTTGACTTTCATGCTGAAGTGATTTGGTAATACTGAGTTGGCTAGAAAGTTCATTTGTTCCGTGAGAGGTTACAGGAAAACCTGAACGAACTTTTTGGCCAACCCAGTAAGTAAAACTCGATTAATGTTGGAACATAAGGGTGTATATATGGGTAGTCTTACTCTGGGCGTGCTTGTGCTTGTGTGCACAGGTCTGTGCACAGGCCTTGTGTGCAGCTCACACCATGCACATCAAATCGTTGATCTTCTCTGAGCTCAGGGGAGCACAGTTCATGGAGAGAGCGGTCCCTTCTGAAAGTCTGCTCTGCTTGTCCCTCCCTTAGGCCGGGTGTGTATGTGCTGCTGCTGAATCCGCCTGGGACAGGTGGGGTCACCCGGCCACGTGGTTCCACCGGAGCACTTCTTCCCTAGCAAGTGGGGACGCTCATTACCAGTGAGCCTTGAGGAAACTAGAACCTTCTATATCATCCTAGCATATTTGGTTTCGTAATAATACGTGTATTTAACTGCATAGTAAGTATGTCACTATTAATCTTGTAATTAATTTTTTAACCTTAAACCATGTTTTATACATTATTTTGTTATATACGTAATGTGTGATTTGAAAATTTAAAAAAAATTTTTTAATGCAGAGCATGCTAAACTTGAAAAACCATTGGTTACAGTGTGACAGAAACGGTAGCTGTTTTGCTGCTTTCCTGACCAAAGATACAGGGCTAGTGGATGTTTAGAATAGGAATTAAAGGTAGAATCTTCTGTGTCTTTCTCTGAAGGAGTTCTAACCTTTGGAGTTGAGGATGACTTCCGAGTTTTTGGTGAAGAAGCATCAGGGTCTTAACCAGTACAAACACTTGAATTATAACCTTCCTTTATTTTTCTTTCCCATAGTAAGCCACAGAACGAAATGGTTTCTTTGAAAAGGCTACCTTTTGAATTGCTTTCTCGTTTGCTCATTTCATAGGGCTTAGTTAAAAAATAAAAAAGGTTTCTAGTAGTAATGACTCTTTAAAGATACTTTCAGCTGTATTTTCAGTAGTGAATATTGGACCCTGTTGTACTGAGAACGGCGTGGCTTTCATCATGCTTTAGCTTTTGGACATCCTTCCCAAGAAAAGAATGTGAGCTGGAGGTGACCATTTCCTTTTTGTTCCTAACGTTTGTATCTGATACCACTCCCCAGATTTTGAAGCAGATTGATCCCCAACTCATATGGCTCCAGTTGAATTTTGAAGTGCAGAATCCTGGTTTTCCAGCTGCAGAGGTAGTGGAGTGTGAGTAGGGAGTCAGTGGGAAGTGTGCAGTGATGCGTGTTAACACCTCTGATGTAACCTTGATAGTGTTGATGAAAACACTTCTTTGTGCCGCTGACAAGATAAATAATGCTGTTCCTGCATAGCCCAGCTACGTACCAAAATGCAGACTTTTCTCATCATCACAGAAAGCAGAATTTTCTCCTGATAACCTCATCAGAAATGTTTCCGAAGGACGCATACCGTGTCTGTCGTCCTCGGTGGTCAGTGTGTTGTCTACTGAAGACTCTCAGCCTGAATCAGATATTCCTATAGAGGGCCTTCTTGGCCCCCTCATGTGCCCAGGAGGGGGCGCCCCAGAACTGTAGCCTTAGTGCTTATGAAGGACCCCTGGGGAGAAGTCACACTCAGGAACACCGTCACAGCTCATCACCATTGCTTCTGCACAAAGACTCCAGAAACTGGTGGTCAGGGTCTTCGAGGCGGCCACACCAATTTATTCTTAGGATGCCATCAGGATGGGTCTCCTTATGAGTGCAGGGATCTGAGGGTAAGAGTCCAGTTCTCTGTGTTTCTAGGCGAAATGCCTAAGTGTTCTTACTGTGCCATTTGTGTTAGATTTCTGTGATGTATGACGTTGGCTTAAAAGGGAATTTTCATGTTTTAAGTTAGAGGAATATTAGAATCTGCTTTAAAGGAAAGTTCATTTCAAATATAAGGAAAAATAGGTGAATGTGTGAATTTTTTGAGCCCAAGAGATAAGATGTGAAGAAAATATTTAAAATCTTCCATATGTCCTATAGAGAGCACTAGACCTCCCCACTCTAACACAGTGTATTTGCACTACTATAATGTGAAGAATGAGGATATAAAAGATGTACATGTGATTGCTTTTTATATCTTTTTTAAAAAAGGGGTTTGAGTCTGCTGCACTAGACTGTACATAACTGGTTTATGAGACGTGTTATACTAGCTTTATAAGCCCCTAGTGCTGGACTTGTGTCTTGGTATGATCAACAACACGCGATAAGCAATGCAAAACACCACGCCTTAAAGAAGGAAGTGTAACGTATTGGTTGAAGTACTAAAGAATGTATTTAAGTGACAAAAGGAGATTTAAGGACATGTGTATTATGACATAGGAGCTCAAGAAGAAACTTCTTTAGAACTAGGAAAACATGTATTTGGGAAGAAAATTTAGGGGCTAAAGTTGTATATTTTTTATTTAAGAAGTTAAGTTATTGTATAATTTGGAAGATGTTGCTTTGAATTTAGCACAAAACTATTTCAAAGATTTTTATTTGAAAAAAAGTGACGTATTTTTGTGCCTTAATATTTGTTCTGACTTAATAAAATGCTTTCTGAGCTTTTGGATG EMBV3_10040 TTCTCCTTTCATACTTGTTAGCATTTGTCTTACGTACTGTGGTGCTCCCGTGTTGGGTGC Gene BVT0102_159270 + 1 EMBV3_04361 GK000001.2:35024719-35603048 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00218178 TCONS_00010367 TCONS_00022064 TCONS_00214738 TCONS_00250553 TCONS_00098385 TCONS_00251853 TCONS_00165811 TCONS_00032587 TCONS_00070841 TCONS_00141355 TCONS_00031938 TCONS_00141464 TCONS_00177994 TCONS_00210178 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00200531 TCONS_00198662 TCONS_00088289 TCONS_00073692 TCONS_00056147 TCONS_00116799 TCONS_00089425 TCONS_00019991 TCONS_00189806 TCONS_00197973 TCONS_00207228 TCONS_00250544 TCONS_00239410 32 XLOC_142855 XLOC_131641 XLOC_005918 XLOC_012735 XLOC_130757 XLOC_153496 XLOC_058631 XLOC_154794 XLOC_100651 XLOC_018827 XLOC_042618 XLOC_085783 XLOC_018183 XLOC_085892 XLOC_107767 XLOC_128688 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_120316 XLOC_053076 XLOC_045454 XLOC_033950 XLOC_070965 XLOC_054210 XLOC_010669 XLOC_115843 XLOC_119632 XLOC_125746 XLOC_153487 XLOC_146076 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_42682 AGTGTTCTGGTTCATGGAGCTAGTGGAGGAAAATCTGTTGGTGAAAAAGGAGTTGATGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16855 TGCCAGGACTGGTCCCTGAGAACTGGGATATGTGAACCCTGAATGAGTAGGATAGGGGTT Gene GeneID:785057|FBXO44:NM_001101295:100_cdna Constitutive 0 NULL GeneID:785057 16 GENE FBXO44 NULL F-box protein 44 EMBV3_09865 GCTGGAGCAATAGCACAGACAATATCCTACCCATTTGATGTAACACGTCGGCGAATGCAG Gene GeneID:282524|SLC25A16:NM_174672:242_cdna Constitutive 1 NULL GeneID:282524 28 GENE SLC25A16 NULL solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 EMBV3_32920 GACGCTGCTGCAGAAAGGAAGAAGTGTTAGGTGCAGCATGTGGTGTCTCAGAACTGCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28886 CTGCCAACATCACCATTGTGGAGTCAAACGCCACATCCACATCTACAGCTGGGACAAGCC Variant GeneID:281361|NRG1:NM_174128:15_cdna 528^629 1 EMBV3_15195 GeneID:281361 27 GENE NRG1 MGC154949 neuregulin 1 EMBV3_43693 CCCGCTACCACCACCTTAATATAATCACATGCTTATTGGAACACTAATATCTGCACCCTA Gene BVT0102_136677 - 1 EMBV3_28293 GK000018.2:18730221-18745673 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082502 TCONS_00082503 TCONS_00082499 TCONS_00082500 TCONS_00082501 1 XLOC_051028 Coding TCONS_00082499 XLOC_051028 Coding Coding PAPD5 18:18715169-18732499 = TSS62221 3887 1 TCONS_00082499_4 467 12 0.776386404293381 0.000739076430204197 0.000560909540283643 0.000613020327795986 0.0002879333885601 0.000367555267210501 0.00010850719175125 0.000420560043629539 0.000441411736690423 0.000989908956353353 0.000978832779719793 0.000284466014674376 0.000145778572019776 0.000328814766822102 0.000184403740677374 0.000470699578729352 0.00388675189281265 0.000685415546619349 0.00117149793327701 0.000266650224222744 0.000379441458041418 0.00013888338593787 0.001155242564378 0.00105695737980826 0.00175744469054451 0.00048348522175207 0.000831277107207851 0.000572077933533062 0.00063480791741635 0.00053626500975654 0.000394747215537549 XM_001256515.5 PAPD5 PREDICTED: Bos taurus PAP associated domain containing 5 (PAPD5), 0.0 6937 100.00 0.989194751736558 NM_001040285.2 PAPD5 Homo sapiens PAP associated domain containing 5 (PAPD5), transcript 0.0 5701 92.58 0.989194751736558 TCONS_00082499_4 sp|Q8NDF8|PAPD5_HUMAN PAPD5_HUMAN PAP-associated domain-containing protein 5; 0.0 936 98.90 0.967880085653105 2 coding 0 0 0 0 -0.0306104328472735 0.836633976681913 0.0344284669304343 0.704012866390197 ATGCTCCAGACCTTGAGCCAGCCCTGCACTCGCAGTGATCTTCTGCATGAAGAAATCAGTGATTTTTATGAATATATGTCTCCAAGACCAGAGGAGGAGAAGATGCGGATGGAAGTGGTGAACAGGATCGAGAGTGTGATTAAGGAGCTCTGGCCCAGTGCTGATGTCCAGATATTTGGAAGTTTTAAAACTGGCTTGTATTTACCTACAAGTGACATTGATCTTGTGGTATTCGGGAAGTGGGAAAACCTACCCCTCTGGACCCTGGAGGAAGCTCTTCGGAAGCATAAGGTTGCAGATGAAGATTCGGTGAAAGTTCTGGACAAAGCAACTGTACCTATTATTAAATTAACAGATTCTTTTACCGAAGTGAAAGTTGATATCAGCTTTAATGTACAGAATGGCGTCAGAGCAGCTGACCTCATCAAAGATTTTACCAAGAAATATCCTGTATTGCCATATTTGGTTTTAGTATTGAAACAGTTCTTATTACAGAGGGACCTTAATGAAGTATTTACGGGTGGAATTGGTTCTTATAGTCTCTTTTTAATGGCAGTAAGTTTCCTTCAGTTACATCCCAGGGAAGATGCTTGCATCCCCAATACAAACTATGGTGTTCTCTTAATAGAATTTTTTGAATTATATGGACGACACTTCAATTATTTAAAGACTGGCATCCGGATAAAGGATGGTGGTTCCTATGTGGCCAAAGATGAAGTACAGAAAAATATGCTAGACGGCTACAGGCCATCCATGCTTTATATAGAAGATCCTTTACAACCAGGTAATGATGTTGGAAGGAGTTCATATGGGGCCATGCAGGTGAAACAGGCCTTTGATTATGCCTACGTTGTCCTGAGTCATGCTGTATCACCAATAGCAAAGTACTATCCCAACAATGAGACAGAGAGCATATTAGGTAGAATAATTAGAGTAACAGATGAAGTTGCCACATATAGAGATTGGATATCAAAGCAGTGGGGCTTGCAGAATAGGCCCGAGCCTTCATGCAACGGTCCAGTGTCTTCCTCTTCAGCCACACAGTCCAGCTCTAGTGATGTTGATTCCGACGCGACACCATGCAAAACCCCGAAACAGCTGCTCTGCCGTCCGTCCACTGGGAACCGGGTAGGGTCGCAGGACGTGTCCTTGGAGTCCTCTCAGACAGGCGGGAAGATGCAGAGCACCCAGACCACTAACACACCCAACAGCACCAACAAGTCCCAGCACGGATCAACAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACCCAAACAAGCCATGGTTCCTTGATGACAAACAAACAACATCAAGGGAAATCAAATAATCAGTATTACCATGGCAAAAAGAGGAAACACAAGAGGGACGCCCCCCTCTCAGACCTTTGTAGATAGTCGGCGTCGTGCGACGGACTGTCTTCTGTGTGCAATGATCTCACGCGAAGGACAGTTGGATAGGGACTCCTGGGAGACATTCGGGAGCCTTACCCTGTTCAGACGTTGATTTAGCAACTGCGTTTTTTCCCAGCTCGCCACGGAATGGATCATGAAGACTGACAACTGCAAAAACAAAAAGCAAGCAAAAAAGGGGGAAAAAAAAGGCTGCTCATTTGATAAGTCATATGCTATAACAGGGTCATTTTAAGATTTAAAGCTTGAATGTAAAATAAATCTATTTCTCATTGGCTTTATGCAGAGTTATAGGGGATAGTATTCAGTGTGGGTAGGGTGATAGACACAAGAAAATTTCAGAGGATGGGGTGGGGAAGGAAAACACAGGTATCATATAGGAAGTCCAAATTTCAAAGGGGAAAGTGATCTGTGCATGTTTTTTTTTTTTTTAATATTTTTGCATATATTTACCATTTTATTGTGTGTATATATAGATGACCATATAGGAAATTGATATTTGTAATAGTGGATTTGTTAATACTTTTTACATAACATTACTGTTTAAATTGTAAACAGATTTTTCTCAGGATTAGTTTGAAAAATAATCTGAATTGTCATCTTAACATCCATCTATAGGGAAGTGATTAGTTCTATTACTCAAATTTGTTTCCTCAGCATTGAAATGACTTAATAGAACCCTCGTGACCTGCTGCAAAAATTTTCCTCTAAAGAAAAGGTTATGGTGGCAAATGACGTTTATTTTATTTTGTAAAAAAAGAAAAAAAAATGTACTATGTACTTTTGTGTAAACACTGAAAAATCTCTAGTCATCTCTAAGAATTAACTTGCAACTGTTTTCTATAGTGCTGTCGTCTTGGGCAGTGGGCAGTTACATGACTTCGTGTTTGTTTCCTTTGCAGTCTTTTTTTTTTTTTTTTTTTTCTTCCTAATAGGGAAAAAAAAAAAAGGCCACCCGCATCTGGTCCCATTCCTGTTGCAGTGAAACCTCGAGTTCCACAGACTTTGCATGCTGGCTCCTCTAACCCTGTGTGCTGCGTGTGCTTGTTTTTCTCATCTCTTATTCTTTTTTAAATTCATGCTTAACAACTGTGGGAGAGAATAACTGTAAACAGCTTTAATTAAATCATACTTATAAAAAACTATTTTCTTAAACTCCACTTTATGCTTTTGGTATTGTTGATCTTTAAAAATTAAATGGTCTTTGATAATGGATCTATTTTGTATTGCCTTATTAAGACCAAATACTTCTTGTCATCCCATTCTTTATCCTCTCCTTTCATGGAATTGTTATCTTTAATTAAAACTTTTTTAAACATTGGCTTGTTTCAATCATACTGTAAATTTTGGTTGTGGTCAGTTTTGAGTGCAAATGAGATGTATCATTCTGTTATTCATCACGTGTTGAGTTTGAAACTCAGTTGGAAATACTTAATAGAATGTAAGTGGTATTTCTGAAAATGCTTTCTTTCAAGGTGAACGCTTTTATGTTTAGCATCAGTGTCTGTGGCTCTGTTAATTACAGCCATTTCTGAGATGAGATTCTTTTATATATATATATATATATATACATATAAAGTACTATTATTGGCTTTTAGGAATTTCTTTTATATACGTTTATGAAATACTGAAGACCAACCAGACCGTTAATGGACACTTAGTGCAACTTTTTATAAAGAAAATAATGCTAAAATAAGACCAAAACTGATGTCATCACTGAAATTAACAGTTTTCAATATGTTCATATTTTAATTCACAATGGAAAAATGTGTTCCAAAACTGGAAATTCATAATGCTTGTGTAAAGCGTGGAAGATTTTAAATACGATGTTATTTTGACAATGTTTGAAATTTTAGAGTCACATTTTATTCTGATCAGAATTTTTATCAAGATGTTGAGCTTTTGTTTTTTTGAAACTAGTTTGTCATAACATATTGTGCATAATCACAGTATTTATTTTCTAGGATTATTGTGAATGTGTAGACTTATGTTTACTGCTAAGGGAACAATTATTTATAAAACAATATTAAATCCAGTATTAGCTGCCTATTTCAGACACTTAATACTTGCAGAGACCCATGTTACATTTACCACACTGAAGTTTTGTTTTGTTTTGTTTTCAAGAATCACCTTCATTGTTGAAAGTAAATGTACTCTTAGGGTGCAGATATTAGTGTTCCAATAAGCATGTGATTATATTAAGGTGGTGGTAGCGGGAAGATAATCTTGATTCCATTGGGAATCTTAGGTTTTCGTAAATTTATTGGGAAAATAGTTTTTCCTGTACTGCTGACGTTTCTTTTTGGTAAACAGTATCTTTCTAAAAGAAAAGCATGAAGGAGAAATTGAGGTGTGTACATTTCCTCAAATGACCAGCATTGTATTCGTGAATACTGTGTATCTTGCAATGAACAGTGTGGAAGCTGTTCATTTTTCAACCTGAAGTAAAATACTTTCAAGAACTTTTA EMBV3_31173 CACCCTGGGAGCCGGGAGGAGACGGTTAAATCCCAATGCTTCCAGAAAGAAGTTTGTGAA Gene GeneID:360191|NOB1:NM_183083:78_cdna Constitutive 0 NULL GeneID:360191 18 GENE NOB1 NOB1P NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) EMBV3_35793 GCGCTTTCTTGGCTTTGAATCCGAGCTCTGTGTTTGACTTTGCTTGTTATCCTGGGACAC Gene BVT0102_080087 - 1 EMBV3_42808 GK000017.2:12340190-12582995 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074858 1 XLOC_046444 NonCoding TCONS_00074858 XLOC_046444 NonCoding NonCoding - 17:12382124-12429201 - TSS56608 845 1 TCONS_00074858_2 57 0.22603550295858 3 0.982114028379641 1.61014176129684e-05 2.37832148870452e-05 0 0.00314476188195672 0 0.000173561393660442 0 0 0 0 0 0 0 0 0 0 0 0 1.69726208765748e-05 0 3.59257675521328e-06 0 0 0 0 8.33784182599397e-06 0.000173346895069243 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 8e-46 188 82.56 0.22603550295858 0 noncoding 0 0 0 0 -0.013836607249292 0.912845058907859 0.0106456962981244 0.855022559567113 GCCGCAACACGTGGTAAGAGAGTTGGTGGGTCATCGGATGCAGGACCTTGGTGACAGCCACACAGCACACTGGTGAAGATAAGATTTGTGCCTTAGCGTAGCTGTGTGTCCCAGGATAACAAGCAAAGTCAAACACAGAGCTCGGATTCAAAGCCAAGAAAGCGCCTGTCTAAAGACTTTAAAAATGCACGCTTCGAACTGTCGCATCATTATTTGAATTCATTGACAACAAACCAGAATATGGACCCATCAGTTGAGCCTCCCTCAGTTTTTGAACTGACCCCACTTTAGTAACAACTGAGTTTTCTGCACAGAGCAAGAGAAGAGGAAGCCATCACTCTCAGCCCGATTTTATATCATCTCTCTCTTTCCGACTATAAAAATGCTCCATGCTTTTTTAGTATTTAATTCACGAAGTTAAGATGAAAAATTTCGTCGTAGTCAAAAAAAATGTGATCATGTTTAACTCACATTTTTTTCTCCTGAGTGTGTGCTTTCTCCATGCAAACAATGGAAAGGATTGAATTTGGAAACAAAAACCAAAAGAAAGCTCTTTGGATTATACCTGGAGATTATACTTGGAGACGGTACTGAAGAACAGGCTTCGACTGCATTTATTGAAAGGTTGTGGGTGTGTGTGTGTGCTCAGTCGTGTCGGACTCTTTGCAACGCCATGGACTGTAACCCACCAGTTCCTCTGCCCATGGAATTTTCCTGGCAAGAACACTGCAGTGGTTGCCATTTCCTACTCCAGGGGATCCTCTCGCCCCAGGGATCGGGCCCACATCTCTTGCATCCCCTGCATTGGCAGATGGATCATTTACCACTGTGCCACCTCATCCCTT TCONS_00076664 r 5' 41749 TCONS_00076664 r 5' 41749 EMBV3_03639 GAGGAGAGCTCAGTAGGAAAATTCGGTGGAGAAAAGAGACTGAGTAGCTTGGTTTACGTG Gene BVV0102_111483 + 1 EMBV3_19343 GK000002.2:124736809-124819575 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00117583 TCONS_00207080 TCONS_00223729 TCONS_00081496 TCONS_00192189 TCONS_00063594 TCONS_00223718 TCONS_00201908 TCONS_00173130 TCONS_00192192 TCONS_00254827 TCONS_00112239 TCONS_00232656 TCONS_00187642 TCONS_00192191 TCONS_00206518 TCONS_00223721 TCONS_00062709 TCONS_00173129 TCONS_00129429 TCONS_00187683 TCONS_00066236 TCONS_00054146 TCONS_00232666 TCONS_00060246 TCONS_00164317 TCONS_00232768 TCONS_00223726 TCONS_00054102 TCONS_00201906 TCONS_00199376 TCONS_00054100 TCONS_00201912 TCONS_00062705 TCONS_00142119 TCONS_00135598 TCONS_00201907 TCONS_00063595 TCONS_00201910 TCONS_00139971 TCONS_00152632 TCONS_00203551 TCONS_00200984 TCONS_00205857 TCONS_00192190 TCONS_00015588 TCONS_00157094 TCONS_00034471 TCONS_00152623 TCONS_00151323 TCONS_00060247 TCONS_00218539 TCONS_00182805 49 XLOC_006328 XLOC_071749 XLOC_125599 XLOC_137028 XLOC_050375 XLOC_117131 XLOC_038320 XLOC_137017 XLOC_123553 XLOC_104301 XLOC_157759 XLOC_068136 XLOC_142141 XLOC_113687 XLOC_125040 XLOC_137020 XLOC_037436 XLOC_078142 XLOC_113728 XLOC_040950 XLOC_031955 XLOC_142151 XLOC_036632 XLOC_100199 XLOC_142252 XLOC_137025 XLOC_031911 XLOC_123551 XLOC_121029 XLOC_031909 XLOC_123557 XLOC_037432 XLOC_086544 XLOC_081821 XLOC_123552 XLOC_038321 XLOC_123555 XLOC_085033 XLOC_092397 XLOC_124202 XLOC_122634 XLOC_124763 XLOC_008519 XLOC_095554 XLOC_020687 XLOC_092388 XLOC_092086 XLOC_131859 XLOC_110990 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_32067 TGCGGATACTTCCACAGGTCCCAGAACCGCAGTGAGGAGTTTCTCATAGCTGGACAATTG Gene GeneID:282092|TIMP1:NM_174471:27_cdna Constitutive 1 NULL GeneID:282092 X GENE TIMP1 NULL TIMP metallopeptidase inhibitor 1 EMBV3_02184 ATATTATACGAACAGCCAAAGTGTGGACCCCAGAGGACCCCAGAAAACTCAACAGCAAGC Gene GeneID:781540|PTF1A:XM_002707721:285_cdna Constitutive 0 NULL GeneID:781540 13 GENE PTF1A NULL pancreas specific transcription factor, 1a EMBV3_34828 AAGGGTCTGGGTCCAGCCACCTACCTGAAGACACAAGCAAGGTTCCTATCTGATCATTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41498 GTGGTCCTTCCAGTGCTTGGATGCAATATTCAGTACCCTAAAAACAAAGTGGGGCAGTGG Gene GeneID:505464|PUS7L:XM_002687358:39_cdna Constitutive 0 NULL GeneID:505464 5 GENE PUS7L NULL pseudouridylate synthase 7 homolog (S. cerevisiae)-like EMBV3_37794 GAAAAATGTATTTTCTGCTGTATGCAAGAAAATAGGGCATTTCAAAGAGCTAAGTTTTGG Gene GeneID:504480|SGK3:XM_002692686:75_cdna Constitutive 2 NULL GeneID:504480 14 GENE SGK3 NULL similar to Serine/threonine-protein kinase Sgk3 (Serum/glucocorticoid-regulated kinase 3) (Serum/glucocorticoid-regulated kinase-like) EMBV3_27361 CATCGCTAGCGACCAGGGCGCGCTACAGCGCTACTACGTCTACAACTCAGTCAGTTACGA Gene GeneID:518699|SMPDL3B:NM_001100379:182_cdna Constitutive 0 NULL GeneID:518699 2 GENE SMPDL3B NULL sphingomyelin phosphodiesterase, acid-like 3B EMBV3_36694 TGGCCAGGACTTGGCTTTTCACTACGTGGCGGGCTGAAGCTCTTCTGTGCTATGAAGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09949 CCGAAGTTTGCGAAGGGGTGCCATCGTGGTCCTGTTGGTTAGGGTCTTCATTCACCATGA Gene BVV0102_153442 + 0 NULL GK000010.2:87132331-87177094 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015255 TCONS_00015253 TCONS_00015252 TCONS_00015254 1 XLOC_008449 Coding TCONS_00015254 XLOC_008449 Coding Coding FLVCR2 10:87160746-87200982 = TSS10807 2023 2 TCONS_00015254_2 244 12 0.950018640487138 1.21011262254321e-09 0.000618428947733796 3.62363989162365e-11 4.04615323564788e-05 0.000381712334440542 2.9419798171458e-05 0.000606748441595669 3.75354785439672e-11 2.22403147937329e-62 0.00188128578507041 0.00010259547680342 1.06209862849985e-52 0.000177476410047449 0.000895751095822095 1.60211718568896e-246 0.0131619499972826 0.00286277722140108 0.00232074532041353 0.00144459606364235 0.000909647452584365 0.000465995443723245 0.0032828095383346 0.00346533447994049 0.00371721524055186 0.00146569202435037 0.00113220116904764 0.000121845569393631 0.000338420081360846 0.000412473685979197 3.10074880042625e-05 NM_001192143.1 FLVCR2 Bos taurus feline leukemia virus subgroup C cellular receptor family, member 2 (FLVCR2), mRNA. 0.0 2331 100.00 0.638161146811666 NM_017791.2 FLVCR2 Homo sapiens feline leukemia virus subgroup C cellular receptor family, member 2 (FLVCR2), transcript variant 1, mRNA. 0.0 911 76.86 0.617399901136925 TCONS_00015254_2 sp|Q9UPI3|FLVC2_HUMAN FLVC2_HUMAN Feline leukemia virus subgroup C receptor-related protein 2; 5e-122 362 88.39 0.913934426229508 2 coding 1 1 1 1 0.0445999822370204 0.672665533677148 0.0583057329482942 0.295135733291039 ATGGTGAATGAAGACCCTAACCAACAGGACCACGATGGCACCCCTTCGCAAACTTCGGCCGTCTCGGCCCACCCCAGCGTCTCGATCCACCCCAGCGTCTCGGCCCACCCCAGCGTCTCAATCCACCCCAGTGTCTCTGTATACCCTAGTATTTCGGCCCACCCAAGTACCTTGGCTCAACCCAGTGGCTTGATCCAACCCAGTAGCTCGGGCCCTGAAGATCTTAGCGTGATCAAGGTGAGCAAGCGCCGGTGGGCGGTGGTCCTGGTGTTCAGCTGCTACTCCATGTGCAACGCCTTCCAGTGGATCCAGTACGGCTCCATCAATAACATCTTCATGAACTTCTACGGGGTCAGTGCCTTTGCCATCGACTGGCTGTCCATGTGCTACATGCTGACCTACATCCCTCTGCTCCTGCCGGTGGCCTGGCTCTTAGAGAAATTTGGCCTGCGGACCATTGCCCTCACTGGCTCTGCTCTCAACTGCCTGGGAGCCTGGGTGAAGCTGGGCAGCTTGAAGCCGCATCTCTTCCCAGTCACGGTGCTGGGCCAGGTCATCTGCTCCGTGGCCCAGGTCTTCATCCTGGGTATGCCCTCCCGCATTGCTTCCGTCTGGTTCGGGGCTAATGAGGTGTCAACCGCCTGCTCCATAGCTGTCTTTGGCAATCAGGTGTTGTTCCCTCCCAGTGGTTCCCATCATAGAGTGCTAACAGAAGTAAATTTTTGCTCCCACTGAATGCTGGTGCTTTTTATGCCTTGTCCACTCTGCTGACTCGCATGGTGATCTTCCACTACCCGGGGGAAGAAGTGAATGCTGGAAGAATCGGCCTGACCATCGTCCTTGCGGGAATGCTCGGGGCTGTGATCTCAGGCATCTGGCTGGATAGGACCAAAACCTACAAGGAGACCACTTTGGTGGTCTATATCATGACTCTGGTGGGCATGGTGGTTTACACAAACACCTTGAACCTGGGACACCTGTGGGTAGTATTCATCACGGCTGGCGCAATGGGATTCTTTATGACTGGCTACCTCCCACTGGGGTTTGAGTTTGCCGTGGAGCTGACATACCCGGAATCAGAAGGCATGTCGTCTGGCCTCCTCAATGTGTCTGCCCAGGTATTCGGGATCATCTTCACCATCTCCCAGGGCCAGATTATCGACAACTATGGAACCATGCCTGGGAACATCTTCCTGTGTGTCTTCCTGACCCTTGGAGCGGTGCTCACTGCATTCATCAAGGCAGATCTCCGGAGGCAGGATGCAAACAAAGAAATTCCTGAGACTAAACCCCAGGACGGGGAGGAGGAGGAGGACAGCAAGAGCAGCAAAGCCCCCACCACTGTGCAGGAGGAGCATTTCTGAGAGAGGGCAGAGGAGCGACTCGGGGGACTCGGACCGTCCCCACCTCTCCAGCCAGCACAGCTCTACTTGCCAGCCCCACGGCCTTCACCGAGCAGCTTCTGGGGGAACTGGGAGGAACATCTGTGTCTTGTAGGATAGTGCCTCTGCCTCCTGGAACCCACTCCAGAGCTTGCCCTGTCTCCGTGGGGGAGATGCCCTTTCTACCACACAGGTTGGGGCCCCGCCCTGCCCTTGCAGGTTCTGGGAGCTGGGGAGGCAGAGAGAATCCTGGAGTCAGTCCTGGCTGCTGCCTCACCTTCCTGCTCCAGTCCATCCCTTGGGACAAAGCCTGCACATTATCCCAAAAGAAAGCTTATTCAGGAGATTAACGTTTTCTAGTGTCTGAAGACCCTTAGGAGCCCAGTTCTAAGGAGCAGCAGCTGCTCTGGATGAGGGTCATTCTTGGGCCCCCAGACTGACCACTGACATTCTGTGGGAGAGCAAACACCCTCAGGACAAACCCCTCAGGACTCCGGGACCAGGTTCTTCTGGCTCATGTTGCGAATGTCTGCAAACCTCTCTCCTCAGAGCTGATCAAACCAAACATCAATAAACTTGATAAAAACATTGCTGTGACCTAGAAGACTAAGCCGATTTCAGACAGTTGACCTCCTCAGGAT EMBV3_05206 CTCAATGGACTAACTCTCAGGGTCCTACTCTAAAAAGAGGCTTATAGGGTGTTGGTTGCA Gene GeneID:614940|PRSS35:NM_001035457:65_cdna Constitutive 1 NULL GeneID:614940 9 GENE PRSS35 MGC129068 protease, serine, 35 EMBV3_42025 AGAAGGTTCGGCAGGATCTGTCTGAGGCCCCAAAACCCAAGCGGAAGTACCTGGGACGAT Gene BVV0102_270191 + 0 NULL GK000011.2:106399311-106405781 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034388 1 XLOC_020621 NonCoding TCONS_00034388 XLOC_020621 NonCoding NonCoding - 11:106404779-106405364 - TSS25387 585 1 TCONS_00034388_2 70 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000221274931772606 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0140102609532771 0.905914148954448 0.0589209801712242 0.298202688739257 TCTCTTTGGCCCCCTTTCCTGCAGGGTGCGTCCTGTCTCCAGGCAGGGGTGGGGCACCGGCTTATCTGAGGTCCTTCCTGGGAAGGCCCAGCAGGACAGACAGCTTCATCTTTCGTCACCTTCCAAGGTGCCTGTCCTGTGTCCACAGCACCCTGGAAGCCAGCCAGCAGAGGAGGCTGGGAGCTGTGGTTTGCAGGGCGCCCCCTCCCCGGGAGGGCATCGTCCCAGGTACTTCCGCTTGGGTTTTGGGGCCTCAGACAGATCCTGCCGAACCTTCTGACCTCCGCTCCCAGGCAGGGTCTCCAGTGACCCAGAGTGGGCAGCCCAGGTCCAGGGCAAGCTCTCATGTGGCCTTGAGGGCCCGGCCAGGCTCATGGTGAGCAGAGGTGGGAGGCATCACAGTGAGGCTGCCCAGAGAGTGGGCAGGTCCGGATGGTGGGTGGGCGGCGAGTGGCACAGGGCGTCCAGTTGGGTGCTGGCCGTGGTGGGGCGGGAGACAAGGGCCAGTCGGGCAGGAAGGGGAGTGGGCCAGGAGCGTGTGGGAGCTTTCAAAAAAATGGGGGGGCTTTTTAAATTTTTAATGCC TCONS_00026517 . 5' 418 TCONS_00026517 . 5' 418 EMBV3_37052 TACAAGATGAAGTGGGTGGACTAGAAGTCCGCAACAGTGAGGGTGAATGGATTCGTGCAC Gene GeneID:100298932|LOC100298932:XM_002683903:2_cdna Constitutive 0 NULL GeneID:100298932 Un GENE LOC100298932 NULL hypothetical protein LOC100298932 EMBV3_08354 CTGTGGTCTTGCTGTATTTCCAGGACCAAGCGACGACGAGAGCGACTCGGGCCTGGCCTC Variant GeneID:100337474|LOC100337474:XM_002691685:106_cdna 513^687 1 EMBV3_06151 GeneID:100337474 11 GENE LOC100337474 NULL anaphase-promoting complex subunit 2-like EMBV3_27551 ACTGGAGAGAGGCCTTATGAGTGCAGTAAATGCGGGAAATCCTTTAAGCAAAGCTCCAGC Gene GeneID:789996|LOC789996:XR_083963:288_cdna Constitutive 0 NULL GeneID:789996 18 PSEUDO LOC789996 NULL similar to zinc finger protein 211 EMBV3_18895 AGAAGGAGGAAGGTAACAGAGGTGGCCAGAAGGATAAAAGGGGGAATGAAAAGGAGGGAG Gene BVT0102_417309 + 0 NULL GK000005.2:117267736-117632958 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152726 TCONS_00063037 TCONS_00222115 TCONS_00207068 TCONS_00142124 TCONS_00040195 6 XLOC_092491 XLOC_037764 XLOC_135424 XLOC_125587 XLOC_086549 XLOC_024012 NonCoding TCONS_00063037 XLOC_037764 NonCoding NonCoding - 15:8700042-8700951 - TSS46780 909 0.998899889988999 1 0 3.80847090780349e-05 2.44695019285541e-05 1.8457197703753e-05 2.51179503794913e-05 9.04546132526518e-06 2.32193769282951e-05 1.64975398033572e-05 1.75842569893548e-05 2.56267651153105e-05 0.000146096379931976 0.000101060224371271 0.000214051974557344 6.78447093328644e-06 3.43566047738237e-05 4.69382443873928e-05 0.00253571577287287 0.00027376285761758 0.000505656064863299 2.9883817969713e-05 6.88444554198638e-05 1.05362694077077e-05 0.000874691927414894 0.00367093825306501 0.00196482493802574 3.59891260097828e-05 5.80056308524243e-05 1.95955032868978e-05 0.000534130511068097 0.000243717524764884 0.000607393760096817 XM_005223911.1 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant X2, 2e-29 134 92.39 0.1001100110011 0 noncoding 1 1 1 1 -0.0908368316309159 0.525742476738855 -0.0148602594801673 0.803029043356466 GAGCAAGAATACTGGCTTGACTGCTCTCTCTCCCTTTAGACTCTCCTTTTCTCCACAGGTCGCCTGTGTCTCCTCCCTAACCCTTCTCTACTCTACCCAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCATGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTACCCCACTCTCTCCATTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCATCGTAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACTGATAACCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACAAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCACTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCTACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCTGAACGAACCCACACACAGTGAGGAAATGCCACAATAAAGAGAACTCCACAA TCONS_00060538 . 5' 91932 TCONS_00060538 . 5' 91932 EMBV3_38218 GGGCAGCAACCTCCCCTATTCCAGAAAATCATGAAGAATTCTTGACACAGCAGCAAGGCC Gene BVT0101_046425 + 0 NULL GK000005.2:77452339-77502139 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13549 GCGAGCACGCGTAGATGTCGGTGTCATGGAGTGTCGTCATAAAGCGTTTCTAATCATGAG Gene BVT0102_232065 + 1 EMBV3_27708 GK000004.2:115951992-116058790 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13383 CAGTTATTACCACCCTTAAAGGACATGAAGTGACAGAGTGCAGGCGCTGTGTTACCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31235 GAGACCCCAATCCGCATGAGCGTCCTCTCGAGACATGAAAAATGCTGTAATTGGAAACAA Variant GeneID:539591|ARMC8:NM_001046458:66_cdna 59^135 1 EMBV3_25360 GeneID:539591 1 GENE ARMC8 MGC137339 armadillo repeat containing 8 EMBV3_15906 TGGTCAGCCTCGAAACCTGACAACTGCGTGACCCGTCCCCAACGATGATATTGTGTTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25890 CCAATGGGAGCCGATTTGATGCGGTTTGGGAGAAAGGGTTGGTTGTAAAGGGCACGTACA Gene GeneID:614076|MORN5:NM_001076310:213_cdna Constitutive 0 NULL GeneID:614076 11 GENE MORN5 C11H9orf18 C9orf18 MORN repeat containing 5 EMBV3_23572 CATTTCCCAACTGGCTCTGATGCTCCCACTGCCTTTCTGTGGCCCCAACATCCTAGATAA Gene GeneID:788741|LOC788741:XM_002695594:145_cdna Constitutive 0 NULL GeneID:788741 19 GENE LOC788741 NULL similar to olfactory receptor MOR240-3 EMBV3_21289 GCATGGTGGCAGATGGGGGCTACCCTAGTGCTATCCCCAGCTGGTTTCTTCATCTAGGCT Gene BVT0102_437474 - 1 EMBV3_38320 GK000019.2:28238428-28274098 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42356 GGCAAATAAAAGTGAGTAATCTTACTAGAGTCTAGAATCTCTAACCATTGAAGGGCAGCT Gene GeneID:768315|LOC768315:NM_001078130:22_cdna Constitutive 2 NULL GeneID:768315 15 GENE LOC768315 MGC142663 hypothetical protein LOC768315 EMBV3_09716 ACTCAAGGCGTTGTCTGGAAGCGGCCCATGTTCTGGCAGTATGGAGAGTGGGTGGAGGTG Variant GeneID:617138|MGC151839:NM_001081619:116_cdna 314^502 1 EMBV3_36722 GeneID:617138 16 GENE MGC151839 NULL similar to calpain EMBV3_05313 GATCGCGCTGAACCTAAGCCACAACCCGAGGTACAGTATATCAGAAGTACGAGCCAATCT Variant GeneID:540253|LOC540253:XM_002696320:53_cdna 118^485 1 EMBV3_20395 GeneID:540253 20 GENE LOC540253 NULL hypothetical LOC540253 EMBV3_35009 TCTTTCCAAATACGTCAGACCCCCAAGAAGTTCTGCGATTAGATAATGCACCGGAACCTT Variant GeneID:337919|MUC15:NM_176631:14_cdna 803^952 3 EMBV3_09987 GeneID:337919 15 GENE MUC15 NULL mucin 15, cell surface associated EMBV3_11492 CTGAGAGAGGAAACCACTTCCAGCTGCCAAATGAACAGGAGATTTCTGAGGAAAGAGCAG Gene GeneID:613480|INSL5:XM_002686323:97_cdna Constitutive 0 NULL GeneID:613480 3 GENE INSL5 NULL insulin-like 5 EMBV3_41724 CTTCGAATCGCCCCACCTGAGGCTCCCATCACAGGTTACATGTTCGGAAAAGGAATCTAT Gene GeneID:505828|LOC505828:XR_084556:478_cdna Constitutive 0 NULL GeneID:505828 10 PSEUDO LOC505828 NULL similar to poly (ADP-ribose) polymerase family, member 2 EMBV3_24632 ACGTTCTCGTCACACTGGGTGAGAAGATGACAGATTCTCTTTCTTGGATGATGTCTGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01727 GCTGAGGAATCAGAGAAGACAAGCCAGCAACACACCTAGTCATATTCCCATCAGCAGCAG Gene GeneID:286857|PAX6:NM_001040645:11_cdna Constitutive 1 NULL GeneID:286857 15 GENE PAX6 pax-6 paired box 6 EMBV3_03619 AGACTCCAGTGCTGTCCACTGTCTATGGGAGCATCCCTGCTATGGGCCACCTTTGGGCTA Gene BVV0101_038547 + 1 EMBV3_29204 GK000013.2:52593106-52600913 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42907 CTGAGCACTCGGCTGGTGACGGTGACCCGTGCTTCTCATTAAGCCCCAATGCACAATAAA Gene GeneID:100299171|LOC100299171:XM_002694751:499_cdna Constitutive 1 NULL GeneID:100299171 18 GENE LOC100299171 NULL similar to DNA replication complex GINS protein PSF2 EMBV3_30266 CAAGCTCACTGCACACAAGAAGAACAATACTTTGCGGCCCTAGCTTGACCACATGGGGAC Gene BVT0102_021506 - 1 EMBV3_04644 GK000007.2:17752623-17757610 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22544 TTATTTTGGAAATTAATTTGGAAGTTGTTAGTGTTTTTCTCAAATAAGTTGATTTTTATT Gene GeneID:527428|RABGAP1L:NM_001103263:154_cdna Constitutive 2 NULL GeneID:527428 16 GENE RABGAP1L MGC157039 RAB GTPase activating protein 1-like EMBV3_20081 CCAGCGTGTGGTGATGTCATGAAATTACAGGTGGAGGAAGCCTTGACCATCAAAAACACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12454 GAAGCAGAACGCGGCGCTGCGGAAGGAGATCAAGCAGCTCACGGAAGAGATGAAGTACTT Gene GeneID:617628|BATF:XM_002691012:342_cdna Constitutive 0 NULL GeneID:617628 10 GENE BATF NULL basic leucine zipper transcription factor, ATF-like EMBV3_25407 GGCTGTGGAAAGGTGGAACTTAACTGCTTTCTTCCAGAGCAATTCTGGAAGTAAAGAAAA Gene GeneID:506600|SCYL3:XM_002694013:139_cdna Constitutive 0 NULL GeneID:506600 16 GENE SCYL3 MGC137795 SCY1-like 3 (S. cerevisiae) EMBV3_39156 CGTGGATGAGAAACTGGTATAGGGAACAGGCTTTCAGTGTGGCCTGAGACACACGGGCCA Gene BVT0101_028750 + 1 EMBV3_08084 GK000014.2:2071926-2132703 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30820 CTGTTGCTGGAGTAACTGCTGCCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGAGAAAT Gene GeneID:100125943|PLSCR1:NM_001105506:2_cdna Constitutive 0 NULL GeneID:100125943 1 GENE PLSCR1 MGC148322 phospholipid scramblase 1 EMBV3_33616 TGCTTTATGTGCTACATAATTGAAACCATTATACCTGTTAGTTTGTGAAGTTAGCTTACA Gene GeneID:538535|C7H5orf24:NM_001076110:40_cdna Constitutive 1 NULL GeneID:538535 7 GENE C7H5orf24 C5orf24 MGC152153 chromosome 5 open reading frame 24 ortholog EMBV3_17443 ATTCAACTGGAGACTTTCAGTACTCCTCAGAACAGTGCTACGGACCTCTATTTTGAAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16134 AGGAGGCGGGACACTCTGACCCAAGACAAAAGGCCTGTAGCTCCAGCCAAAGAAAATAAA Gene BVT0102_360145 + 0 NULL GK000019.2:39069123-39081164 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096750 TCONS_00096748 TCONS_00096749 TCONS_00096747 TCONS_00096751 TCONS_00096752 TCONS_00096745 1 XLOC_058046 Coding TCONS_00096752 XLOC_058046 Coding Coding NFE2L1 19:39056966-39070817 j TSS71818 5925 1 TCONS_00096752_5 774 0.0293670886075949 6 0.572635379061372 0.00475375498297016 0.00083056063537902 0.00352851721985556 0.00240545465827158 0.000828172889405301 0.000215168981464965 0.00164755621158437 0.00133372708457601 0.00311222900380265 2.07874580418277e-08 5.77750378848381e-22 6.85313418409028e-08 0.00084472208169356 0.00127780760214041 0.000524733570976286 6.56604219365241e-06 2.30112288362312e-09 2.43891079583242e-15 0.00318388849591269 0.000812346453754588 0.000506136996085719 2.96218154669976e-08 0.000715073873687407 0.000738926872736421 0.00224525410798371 0.00213861427199345 0.00119673133157606 3.8276258068398e-19 6.68139523864191e-07 0.000891865115187955 NM_001102515.1 NFE2L1 Bos taurus nuclear factor (erythroid-derived 2)-like 1 (NFE2L1), 0.0 1.007e+04 99.40 0.954767932489451 NM_003204.2 NFE2L1 Homo sapiens nuclear factor, erythroid 2-like 1 (NFE2L1), mRNA. 0.0 5663 85.97 0.802362869198312 TCONS_00096752_5 sp|A5D7E9|NF2L1_BOVIN NF2L1_BOVIN Nuclear factor erythroid 2-related factor 1; 0.0 1442 98.58 0.998708010335917 1 coding 1 1 1 0 0.0188198603682587 0.878452060018233 -0.000413832454690066 0.996177796466768 TGAGGTGGAAGGAGGGGGCGGGGAGGGAAGCGGAGGCTGGCGAGATCTAGGCCGGCCGGCGGTGGCGGCTGCAAGGCCTGGACTCGGGCTGAGAGCTTGCTGTGGTGGCAGCGGCGGACGCCGAGCTCAGCAGCGGGTTTCTCTGGAAACCCCCCTGGTAAGCGTGGAGGAGGCGGGACACTCTGACCCAAGACAAAAGGCCTGTAGCTCCAGCCAAAGAAAATAAACCTTAGGAAGGAGAAGGAGGGAAAAAAAAAAAAAAATCATCAGCTGTTTGTGAGAACAGCCTGCGGTGGAATCTGCAGAATCTACAGAGAGGACAACTAATGTGAGTGAGGAAGTGACTGTATGTGGACTGTGGAGACAGTAAGTCACGTGGGCCTCGAGGACCTGGACTGGGTTAGCAACAGTTGTACTTTCAGAGGTGAGGTGTCAAGAAGGGAAAAGTGAATGTGGTCTGGAGTGTGGCCTTGGTTCCAAGGGGCGTGTTTTCCTCTGAGGCCATCAGGGAGCTCAGCCCCTGTGTTCTGCCAGGGTGGGGTACAGGGTTTGGCACTGAGGAGGGTGACTTGCTGGCTGGAGCAGCAGAGCAGTGGCCTTGATCTGTCTTTCAGAAGATTTAAAAACCAAAAAACATAAACATTCTGGTCCTTCAGCAATGCTTTCTCTGAAGAAATACTTAACGGAAGGACTCCTCCAGTTCACCATTCTGCTCAGTTTGATTGGGGTGCGGGTGGACGTGGATACTTACCTGACCTCACAGCTACCCCCGCTTCGGGAGATCATCCTGGGGCCCAGTTCTGCCTATACTCAGACCCAGTTCCACAACCTGAGGAATACCTTGGATGGCTATGGTATCCACCCCAAGAGCATAGACCTGGACAATTACTTCACTGCCCGGCGACTCCTCAATCAGGTGAGGGCCCTGGACAGGTTCCAGGTGCCAACTACTGAGGTTAACGCCTGGCTGGTCCACCGGGATCCAGAGGGGTCTGTCTCTGGCAGCCAGCCCAGCTCAGGCCTCGCCCTCGAGAGTTCCAGTGGTCTCCAGGATGTGACAGGCCCAGACAACGGGGTGCGAGAAAGTGAGACGGAGCAGGGATTCAGTGAAGATCTGGAGGATTTGGGAGCTGTAGCCCCTCCAGTCAGTGGAGACTTAACCAAAGAGGACATAGATCTGATTGACATCCTTTGGCGACAGGATATTGACCTGGGGGCTGGGCGTGAGATTTTTGACTACAGTCATCGCCAGAAGGAGCAGGATGTGGATAAGGAACTGCGAGATGGGGCCGAGCAGGAGGACACGTGGCCAGGCGAGGGTGCAGAAGCTCTGGCACGAAACCTGCTAGTGGATGGAGAGACTGGGGAGAGCTTCCCTGCGCAGGTGCCTGGTGGGGAGGACCAGACAGCCCTGTCCTTGGAAGAGTGCCTTAGGCTGCTGGAGGCCACCTGCCCCTTTGGGGAGAATGCTGAGTTTCCGGCAGACATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGTGAGCCCCCAGGTCTTCAGAACAACCTTTTGTCTCCTCTGCTGACTGGGACAGAGTCGCCATTTGATTTGGAACAGCAGTGGCAAGATCTCATGTCCATCATGGAAATGCAGGCCATGGAAGTGAACACATCGACAAGTGAAGTCCTGTATAACGCCCCTCCAGGAGACCCACTGAGCACCAACTACAGCCTTGCCCCCAACACTCCCATCAATCAGAATGTCAGCCTGCATCAGGCATCCCTGGGGGGCTGCAGCCAGGACTTCTCACTCTTCAGCCCGGAGGTGGAGAGCCTGCCTGTGGCCAGCAGTTCCACGCTGCTTCCGCTGGTCCCCAGCAATTCCACCAGCCTCAACTCCACCTTTGGTTCCACCAACCTGGCGGGGCTCTTCTTTCCGCCACAGCTCAATGGCACAGCCAACGACACAGCCGGCCCTGAGCTGCCTGATCCGCTGGGGGGTCTGTTAGATGAAGCCATGCTGGATGAAATCAGCTTGATGGATCTGGCCATAGAAGAAGGCTTTAACCCAGTGCAGGCCTCCCAGCTCGAAGAGGAATTTGATTCTGACTCAGGCCTCTCCTTGGACTCCAGCCATAGCCCTTCCTCCCTGAGCAGCTCTGAAGGTAGCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTGCTTCTTCCTCAGCCTCTTCCTCCTTTTCTGAGGAAGGTGCCGTTGGCTATAGCTCTGACTCTGAGACCTTGGATCTGGAAGAGGCTGAGGGCGCTGTGGGCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGAGCTACCAGGACCCGTCTCAGCTCTCCTGCCTGCCCTACTTGGAGCACGTTGGGCACAACCACACGTACAACATGGCGCCTAGTGCCCTCGACTCCGCCGACCTGCCACCCCCCAGCACTCTCAAGAAGGGCAGCAAGGAGAAGCAGGCCGACTTCCTGGACAAGCAGATGAGCCGGGACGAGCATCGAGCCCGCGCCATGAAGATCCCGTTTACCAACGACAAGATCATCAACCTGCCTGTGGAGGAGTTCAACGAGCTGCTGTCCAAGTACCAGCTGAGTGAGGCCCAGCTGAGCCTCATCCGTGACATCCGGCGCCGCGGCAAGAACAAGATGGCGGCGCAGAACTGCCGCAAGCGCAAGCTGGACACCATCTTGAACCTGGAGCGGGACGTGGAGGACCTGCAGCGCGATAAAGCTCGGCTGCTGCGTGAGAAGGTGGAGTTCCTCCGGTCCCTGCGGCAGATGAAGCAGAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCGGCTGCGGGATGAGAACGGGCGGCCCTACTCGCCCAGTCAGTACGCGCTCCAGTATGCCGGGGACGGCAGCGTCCTCCTCATTCCCCGCACCTTGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCGAAGGACCGGAGAAAGTGAGCCTGGGGAGGAAGGGGGTTGACGCTCACCGAGATGGGAACTGGAGAAGGGCTGGGCCTGGACCTGGACCTACAGCGGGGACTTTAATGCCTTCTTATCCAATAGATCTTCTCAGAGGGGATGACTGCGGGTCAGTGGACAGGAAGAGGCAGGCGCTGTCTGGTTCAGCTTCCCCTGCTGAGGGGGGTGGAAGTGGCCAGACCGTTTGGGTGGACAGGGCCCTCACCCCTGTCCCTTTTCTTCAGGTGAAGGGTGGTGCTGGCATTGCTGGAGGCCGGCAGATGGGAAGGAAGGGACTTGTGAGAGGAGGGGGAGGTAGTAGAAAGTCAGTCTCATTTCCGGAAAGGAAGGGAAGGAAGGAAGGGGAAGAAAAATCAAAGCGGGAAGAAAATCAAAGGGCAGGTTAAGTTGGCTCTGGCCAGGATTCCAGGCATCAGGTTTTAGGGGAGACTAGATCATTTGATGTGAGTAAACCCCACTTCACCCCAGGGGAGGGGTGGAACACGGAGTGGGTTCTGAAAGGGGCTTCTGAGCTCTCCTGCCCCTGCACTTTGGCATCCCTGAAGGGGAGCTCTTGGATGATACTTTCTGTGAGGTTTTGGTCATAGGGGAGCCACTGGGACCCGACACTGACTTGAAGAGTTAGGATGAATAATAAACAGGCAAGGGTCACAGGCCCTGTGTTGCAGCAGCCCCAACCAAGCATGTCACTCAACTGCCCTGCCATCCAACTTCCTCTGTGCCCAGTCACCCCTGAGCTGAGGCTCCCACATCTCCATCAGAGCCTGCATGCGAACGCTGTTCTCTTCCTGCCCGCGTGCCCCTGCCCCTCACCGGCTGCCTGGAGTTCTTCTGCAGCTGGGGTGCTGGGCCTGCAGCCTCCTGGGAGCTGCTCTGAGGCAGGGGGGTGATGTGGAGAAGCCAGGCAGTATTCAGCACAACACTGGGGAGTGACCCTTCCCTCAGGCCTCCCCTACCAACTGGGCTTGTCACTGGAAAGACAAAAAATATGAAACCCAGCAACGACGACAAAAACTAGTCCTTTTAGAGTTTCTTGCGCTTTGATTTATTTTTAGGGTTTGAGCCCTGTTTCACTTATAGGGTCTAGAATGCTTGTGTTGAGTAAAAAGGAGATACCCCAATATTCAAAGCTGCTAAATGTTCTCTTTGCCATAAAGACTCCGTGTAATCGTGTGAACACTTGGGATTTTTCTCCTCTGTCCCGAGGTCTCTGTCTGCTTTCTTTTTGGGTTTCTTTCTAGGAGAATGAGAAGTGCATGTAAGAGGGGCTGAGGGTACCCCTTCCGCAAGGCTATTGGCCACAGGCAGCTTCTCCGTACCCCGGTTTAGCAAGAGCTTCCGGCGGACTGCCTGGGGGAGGCAGAGAGGGGAGCGCCAAGGTGACCAGGTGGTTCCTGGACCCCAGTGTCTTTGTTGCCTACTGCTGTGCCCACCTCTGCCTGGGTCTAGAGCATGGTCTGCCCCAGACTAACAGGAATGAGTTCAAGTGGGGGAAGCACTGATTCTCTTCCCCACTTGGAGGGGGAGGCGTTCTAACTGAGCAGTAGGGATAGAAGGCATGAGCCTGGGAAGTGCTTTTATAAATTATTTCCTTGTAGATTTATTTTTAATTTATCTCTGTGACCTGCCAGGGAGAGGAGAGAGAGAGAAAGAAAGATGCTGTGAGCACATGACAAAATAAAATAAAATGAATGATTCATTCTCAAGTGCAGTTTTTCCCTATTTTGAATTTAAACTGAGTGTAAAGGAAACAGGCCCCAAGAGGAGAGCACTGACCATGTGGCTAAGGCAAAGCTCTTATGGGAAGGTGGCTGAAGAGGGGGGAGGTTGACAATGAAGTCTTAAATACTGCATTAAATCTTGCAAAAAGGAGTTTATTATTACCTTTTGGTTTGCCAGCTGAATCCTTTTAGAGGAAGAATTCAGTGTCCGTTGGCCTTTTTGTCATAGGGCTAGGCGGGTTTTGTCACATGGCCCAGCTCCGTACCTGTCCCCCTGAGGCAAACTACATTTTTTTTTTTTTTGGCAAACTACATTTTTACATTGACTGTGCTGTTATTTCTCTGGTGGTCCCACCTGCCAGCTGGAGTGTAGTCATGGTGACGACAGTGATGGAAACCTGAGAGATGGACGGACTGGCACACTCCAAGCACTGCATTGTAACAGCAGGGCCCCAGAACTAGAGAAACAGACAGTGTGACCCCAGGGTTTAAGGCATTTGAAATCCTTTCCAGCTGAGGTGACCAGAATCTTTTCCCTCAAAAAACCAAAAGGGTATGAAGTGGTGAATGCTTTAAGGTACCAGGTGGTTCTTAGAACTGCCTCATGCCCATCTATGGTAGGTACTTTACAAATGCCCAAGTAATGAACGGCCCCTTGGCAGTCTCTGTGAGATTACCAGACAAGGTTTTGGGCTGGAGGCTGTGTTCTCCATCATGAAACCTGTGATCTGGAACTCCCCATGTACCACTGTGTGACCTGGTTCTGTGATGCTGCTGCTGCTGCTACTAGAGTTTATTCTGTGGGGTGGAATAGAATTCTGGGAATAAGGCTGAGCTCTTAATTTGTTTCAATTTACAATGGCTTCCCACCCTCTCCTGCCCCAACTCTAGTTGGAAGGGGTTGGTCCGTCCTATCAAGTAAGAGCTGTTTCCTAAGGCAAAAAGAGAAGGCAGCAGAGGATGAAATGGTTAGGTAGCATCACGGACTCAATGGACATGAATCATGAATTTGAGCAAACTGAGAGAGGATAGGGAAGCCTGGCGTGCTATAGTCCATGGGGTTGCAGAGAGTCGGACACAATTTAGCAACTGAACAACAAAACTGACTGTAAACCAAATAAAACAGATTTTAAAGGAAAAAGGCTAAAAATTAAGTTGGAAAAACTGACAAAAATATATAGAAAACTGTGACAAGTAAAA EMBV3_04240 GAAGAGAGGCCATAGTCCCGCCCCCTCCACCTCCAAAAGTACGGAAATCCGGCATCCTTT Gene GeneID:505572|DOCK5:XM_002689790:25_cdna Constitutive 0 NULL GeneID:505572 8 GENE DOCK5 NULL dedicator of cytokinesis 5 EMBV3_43013 GTTTGTAACGTAAGATACACCTAACATGAAACCAGTTTTAAAAATCAATAGCCGTGTGTG Gene GeneID:513372|MTHFS:NM_001075616:30_cdna Constitutive 1 NULL GeneID:513372 21 GENE MTHFS NULL 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) EMBV3_19449 GCCAGTTCAGGCATGTCTATAATGACAACACCCAACAACATAGGAACAAAGATATCCTCA Gene GeneID:100335939|LOC100335939:XM_002690651:193_cdna Constitutive 0 NULL GeneID:100335939 10 GENE LOC100335939 NULL hypothetical protein LOC100335939 EMBV3_42317 TTCAGATGGGACCTTTTGGTTGTTTTGAAGTGTTTCCAAGCCCCTTCCTGCCACCTCACC Gene GeneID:282886|MMP16:XM_002692825:169_cdna Constitutive 0 NULL GeneID:282886 14 GENE MMP16 NULL matrix metallopeptidase 16 (membrane-inserted) EMBV3_30772 GCCTGGAGGAGAGGTTTGAGCTGTTAGAAGTTGTTTCCACTGAGAGTACAGGACTGGGTC Gene BVV0101_007061 - 1 EMBV3_22330 GK000006.2:46504927-46724552 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36147 GGTTACCACTGGAGCAAGGGAGGAAGGGAGAGGCAAGAGAGATGAGGGATTAAGAGATGA Gene BVV0102_361637 + 0 NULL GK000002.2:105577159-106515070 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34369 AAAGTTGAGGCAACAAGTAAGAGAAAACAGAAACGTGATGCTGAAATAGCCAGAACTATG Variant GeneID:532884|MNS1:NM_001046338:91_cdna 421^523 1 EMBV3_25313 GeneID:532884 10 GENE MNS1 MGC137382 meiosis-specific nuclear structural 1 EMBV3_21904 TCCATCTTCTTGGTGTTGGGAGACCCTAGGGACATCTTTTGCTCAAGCTAAGGGTATTGG Gene GeneID:529902|DSG3:XM_002697687:196_cdna Constitutive 1 NULL GeneID:529902 24 GENE DSG3 NULL desmoglein 3 (pemphigus vulgaris antigen) EMBV3_40912 TCGCCTCCGGAGAGCAGAGTCCACACGGAGAAGCCACCCTGATGTTCACAAATACAGTGT Variant GeneID:518857|ERCC8:NM_001110181:12_cdna 107^304 1 EMBV3_21558 GeneID:518857 20 GENE ERCC8 NULL excision repair cross-complementing rodent repair deficiency, complementation group 8 EMBV3_37633 TTCTTGGAGACAGCACAATCCTGGCCTCCCATCTTCATCAGCACCTCCACTCCTCCTGCA Gene BVT0102_104279 + 1 EMBV3_29328 GK000021.2:6450134-6514359 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120428 TCONS_00120429 TCONS_00120430 1 XLOC_073169 NonCoding TCONS_00120429 XLOC_073169 NonCoding NonCoding - 21:6453039-6454607 - TSS89949 973 2 TCONS_00120429_2 95 0.561151079136691 2 0.380344607530313 0.000377081660552291 3.41632559572504e-11 0.000342501607437068 2.72104916244607e-08 0.000894713281483782 4.89622673412372e-06 1.62359600071261e-61 0.000133734453128563 8.10850915845272e-06 0 0 0 0.000235911940468952 4.83425750063741e-06 0 0 0 0 0.000141705914237183 2.36157655879164e-13 2.79506973596842e-10 0 0 0 1.20813011791071e-16 0.000213281049116578 5.82441653133131e-10 0 0 0 XM_583188.7 LOC506707 PREDICTED: Bos taurus zona pellucida sperm-binding protein 3 receptor-like (LOC506707), mRNA. 3e-26 123 91.11 0.0904419321685509 0 noncoding 1 1 1 1 -0.0343794624084956 0.760117815696513 0.00831295687166385 0.903663790743661 TATTCTTGCCTGGAGACTCCCATGGACAGAGGAGCCTGGTGGGCTACAATCTATGGGGTCGCAAGAGTCCACACAGCTGAGCGACTAAAGAGAGCGAGAGAGAGGAGGTAACCTTTCTCAGCAGAGACAGCTGGAGGGAGACCACCAGGGGAAGGGGCTGTCCTGTACCTTCCAGGGGCTGTGCACCAAGTCAGCACTGCAATGGGGGACACCCAGCGATGCTCACCTAAGCCACACGGCCAGGACACGTTTTCCTCGGCAACGTGTTAACCCCAGCACAGCCTGCTTCTCCCCTCCCCGTGGCTTTCTTGGAGACAGCACAATCCTGGCCTCCCATCTTCATCAGCACCTCCACTCCTCCTGCACGCTTCCCTCCCAGCTTCTAGCTGTGGCTCGTCTGCCTCCCAAGGTTGCTTTCTGCTGGCTCAGCAACCATGGTCCAGCTCTGCTCTAGGCAAGGCCCGGAACTTCTCCACCAGGGGTGGGAGCTAGGCTGGGACCTGGGACCCTCTACTGGAGTGCTTGCACTTGCACATAGATGTCTCTTCCATCTATATTCCAGCACTGGAAAACCGAGAAGCTACAAGGGACTCAAAATAACTGTATACAGTATTTTCAGAGGCTTCCTGGCTGGTTCACTGGTTGAGAGTTCGCCTGCCAATGCAGGGGACACGGATTCAATCCCTGGTCCAGGAAGATCCTACATGCCTCAGGGCAACTGAGCCTGGGCACCACAATAAGAAAAGTCCCCAGGATGAGAAGCCCACCTACTACAGCCTGACAGAGTCCACACACAGCAACGAAGCCCCAGCACAGCCAAAAATAAACAAACCGGTTAATTTAAAAATATTTTCAAATTTTTGTTTGTAATTTTTGAACCTGGGTTATTTATAACTATAGTCTTTAATTTCTAGGCAGCTGGACATTTTCTAATATACTATAGTTACTGTTTTCTATGAACAAGAACATACTC TCONS_00118600 TCONS_00118601 TCONS_00118602 TCONS_00118603 TCONS_00118604 TCONS_00118606 TCONS_00118607 r 3' 31705 TCONS_00118600 TCONS_00118601 TCONS_00118602 TCONS_00118603 TCONS_00118604 TCONS_00118606 TCONS_00118607 r 3' 32067 EMBV3_18302 GAGAAAACGCTTTTGGACTGTGATCGAAGACATCAGATGCCATGTGTCTTTTTGGGGAAG Gene GeneID:281886|KLRA1:NM_174376:2_cdna Constitutive 0 NULL GeneID:281886 5 GENE KLRA1 Ly49 killer cell lectin-like receptor subfamily A, member 1 EMBV3_09645 AACCTTGAAGCAGAGGAGCGGCAGGACCAGAAATCACCCCGGACCTCCTGCCTAGGCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02375 GGAATGGAGAATTCCTGGTGATCCAGTGGTTAAGATTCCTCACTTCCAATCCAGGGGGCA Gene BVT0101_011197 + 0 NULL GK000016.2:24908947-24929464 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28978 TACGATTCCTTGGATTACGCGAAGAAGAATGAGCCCAAACACAGGCTTGCGAGACATGGC Gene GeneID:530464|RPS24:NM_001025339:350_cdna Constitutive 0 NULL GeneID:530464 28 GENE RPS24 NULL ribosomal protein S24 EMBV3_10407 TCCAGAAAGAACTGCAGAGGCTGCAGCAAGCGCACTGACAACAAATACGACCCAAGGAAG Variant GeneID:617478|C1orf110:NM_001076462:347_cdna 248^371 1 EMBV3_28628 GeneID:617478 3 GENE C1orf110 NULL chromosome 1 open reading frame 110 ortholog EMBV3_14074 GGCCTCAGGTAGCCAACTTTAATCCTGAAGTAAGGCAGCAGATAAAGAAAGGGCAAATGG Gene GeneID:785874|LOC785874:XM_002700364:5_cdna Constitutive 0 NULL GeneID:785874 X GENE LOC785874 NULL hypothetical LOC785874 EMBV3_30601 TCGAATGTCCAGTACCGCTGCCAGTCTTTCTATGAGCTCCGGGGAAACCTGACTGTGACA Gene GeneID:100337035|LOC100337035:XM_002694229:152_cdna UTR3_Alt 2 NULL GeneID:100337035 16 GENE LOC100337035 NULL complement factor H-related 4-like EMBV3_10983 GATTGGCACTCCTGGTACAGATGCCAGTGCCAGTGACGTCCACGGCAATTTTGCCTTCGA Gene GeneID:529972|SNX17:NM_001015638:165_cdna Constitutive 1 NULL GeneID:529972 11 GENE SNX17 MGC139637 sorting nexin 17 EMBV3_29429 GAGCTCACCACCAAAAAGTGGACCAGGTGAGGGAGGTACAGAGCTACCAACGTTTGGAAA Gene GeneID:510377|SP140:NM_001075447:88_cdna Constitutive 1 NULL GeneID:510377 2 GENE SP140 MGC140309 SP140L SP140 nuclear body protein EMBV3_25995 CTCTTCACTAGGCACGGAGGAGAGTGGTAATTAGAAGAGAGGGAGCACATGGTCTTTGAC Gene GeneID:511758|TBL2:NM_001075535:146_cdna Constitutive 0 NULL GeneID:511758 25 GENE TBL2 MGC140759 transducin (beta)-like 2 EMBV3_32443 TCCCCGAATGCATGAGAGGAAAGCCAGTGTAGATCTCATACTCGTTTCCCTAAGAAAGGG Gene GeneID:781700|LOC781700:NM_001102526:20_cdna Constitutive 2 NULL GeneID:781700 13 GENE LOC781700 MGC154974 hypothetical protein LOC781700 EMBV3_24442 GTAGATGAAGCATGTCTGTTACTAGCCGAATATAACGGGCGCCTGGCGGCGGAGCTGGAA Gene GeneID:529700|RPRD1B:NM_001101134:1177_cdna UTR3_Alt 2 NULL GeneID:529700 13 GENE RPRD1B C13H20ORF77 Regulation of nuclear pre-mRNA domain containing 1B EMBV3_23845 ACGCTCAGTGTCCGCACCTTCCACTTCATTGAGCAGAACCTCACCAACTACTATGAGATG Gene GeneID:522884|TIMELESS:NM_001102071:1052_cdna Constitutive 0 NULL GeneID:522884 5 GENE TIMELESS MGC159790 timeless homolog (Drosophila) EMBV3_05022 TCAAGCCAATGTACGTGATCACAACCTCTACTGGAACCAACCCAAGGCCATCTGCTGTCA Gene GeneID:282099|TREX1:NM_174475:46_cdna Constitutive 0 NULL GeneID:282099 22 GENE TREX1 NULL three prime repair exonuclease 1 EMBV3_32222 GCACACAGTGTTTCCTCAAGGGTTAGTCTGTGATCTTGCTCGCATGGACCCCTGTATCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13272 ACCAAGACTTTCCTTGACATTCCTCCCTGCTATCAACAAATACAGCTGCTTGAAAGACAC Gene BVT0101_050010 + 0 NULL GK000014.2:16745627-16756963 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052800 TCONS_00052802 TCONS_00052805 TCONS_00052803 TCONS_00052801 TCONS_00052804 1 XLOC_031583 Coding TCONS_00052800 XLOC_031583 Coding Coding SQLE 14:16723392-16749106 j TSS39111 5449 1 TCONS_00052800_9 455 0.0884565975408332 9 0.788433866137751 0.00113213851623639 0.0006519101529893 0.000803769579536605 0.000610854296134237 4.98149083035441e-33 0.000263335198672493 0.000598403717563454 0.000611210673435392 2.19928514278535e-07 3.771394655556e-05 1.50961272407681e-13 2.8160150696908e-05 5.08740639081677e-21 5.33289714952166e-05 9.29052020692211e-14 0.0018622462678731 3.24992847444243e-07 1.15393698551905e-05 0.000727745941922902 0.000222058350781462 0.000361637300200416 0.000969676539583433 0.00034513456156298 0.000531068548101751 0.00054603773396413 0.000752004172957202 0.00047622499490682 0.000159647157536049 1.06063135611325e-10 4.20396502976346e-22 NM_001098061.1 SQLE Bos taurus squalene epoxidase (SQLE), mRNA. 0.0 2159 100.00 0.219489814644889 NM_003129.3 SQLE Homo sapiens squalene epoxidase (SQLE), mRNA. 0.0 1476 83.48 0.255092677555515 TCONS_00052800_9 sp|Q14534|ERG1_HUMAN ERG1_HUMAN Squalene monooxygenase; 0.0 802 81.82 0.986813186813187 3 coding 0 0 0 0 -0.282283110008849 0.0491323827743508 -0.0385976649133603 0.508473126606851 ATATAGCACCTGCTTGATAGTGTGGTTGTGAGGACAAAATTAGGTACTATATGAAAAAAATTGTAGAATGCTGCCCAGACTGTAAAAGTGTCTCTTGTGATTACGGAAGTAGTATTACTTTCTGCCAGTCAGGGGGTGATTTTGTCATGTTTCGCCTCAGGCTTGAGTGACAGATTTTTGTTTCTGAATAAGTACAGCCAGGCCAAGGACTTCCCAGGCAGCTCAGTGGTAGAGAACCTGCGGGTGAATGTAGGAGATGTGGCTTCGATCCCTGGTCAGGAAGATCTAGAGAAGGAAATGGCAACCCACTCCAGTATCTTGCCTGGGAAATCCCAAGGACAGAAGAACCTGGTGGGCTGCAGTCCATGGGGGTGCAAAAGAGTTGGACACGACTTGGCGACTAAACAGGAAGCAGCAGTCAGGCCTAGATTCAAACATACCTAAGTGATGGTTATGTAACATTTAAGTTTGGAAAGCATGGGTATTCAGAATGTGCCCTATGCGAGGATCACAAATGCTCTTTTTGCCTTCAGGTTGGAAGTGGGTTTTGGACTGTACACATACAGATAAGGTGACTTTCAAAAGATTAATTAAAAATTACCTACTTAAAAAAATTTACCTACTTAATAAGGAAAAAAAAATCCTCATGGTAATTTCTAATCAAGTAGCAATCATTCTGATGATAACAATTTGCTTCTACAAGAGTCAGCTGACCAAGCCTTCTGTCATTTTAGCAATATAGGAACTCATAGTTACCTATAAGCAGTTAAGTGAAGAATTATCTTCAGGAAAGCAATCTCCCACGTATTAAACTGATTTTCTTGAGTTCTTTCTAATTCGATGTGTCTTTCAAGCAGCTGAATTTGTTGATAGCAGGGAGGAATGTCAAGGAAAGTCTTGGTTTTATAATGGAAGAAAGGTAAAGTATATTTACCTTGTATATTTACTCTGATCATTCAAGAGTATTGGGGAAACAAGATTTGGAGACCAGGAGTTTAGCTTTTGGTTTCATCACTTATAAACTGTGATTTGGCCAAGCCACTTAACCTCTTTAAGTTTCATATTTGTTATTTTTAAAATCCAGGTAGTTTTGAGTGTCAAATGATGCCTGTGAAAGTGTTTTGACACATAATTATTTCATTAACAGATAAAACATATTTAGGTTGAAAAATGGTGACAAGTACTGTACTTGTATAAACTCAGCAAACTGCCAGGAACTTTAAATTTCATGAGGACATTGCCCTATCCCTTCAGAGATTTGACTGACTTTTGACTTGTTCAAGGTCCTGAGCCTGGTTAGTGGCAGCCAGAGTCTAGGTCTTCTGATTTCTAATCACCTAGTCTTTCCTACTACACCACTGTCATTCATCATTCATTCAATACAGCTTTATGGACGATAAATACAAAAATATTGTGCTAGTCGCTGTAGGTGATTCTGATTTATCAGACTCAGATTCTCCTCTCAAGGAACACAGAAACTAGTGGTAATAGCCATAAATGTGTAGTCAGAAGCTGGAACGATAAGGTATGAATAAACTATTATGTGATCTGGTGAGGATCAGTGGACCCTTGGTAGAAGAGGTGACAATTCAATTCTGCTCCAAAAGGCAGAAAGGATTTGTACATAAGTCTTAGAGTTTAAAACATGCAGTCCAGGGTTACAGTAAGGTGAACAAAGGCACTGGTCTTAGCCCTCAATAAATTCTAGTAAGTTTCAGGGTTTTTTTTTTTTTCGTAACAAGGTCCATCTTTCACCTGTGAATCTCGCAGACTTCTACTGTTCCCTCTAGAATGCCTGTCCTGGACAAAATTCATGTAACTTGCCGGAAGGCCTTGCTTGATTCACTCCAGGCAGAGTGAAGGACTGCCTCCTGTTTCCATGGTTCCCTCCTCGCCCACCCACTTTTTCAGGGCACTTATGACACATCTCTGTTTATTTTACTTCTTTGCCCCGCACCCTTCACCGTTTCTGATTTTGAGGAAAAAAAAAAAAAGGGCAACGCGCATAAGTGTATCTTCAGCCTGGGTACAGTGACAAAGTGCACAGTTGCCTGACAATTTGGGGTAAAGGAAGGGAACACCTGGCATATCCTCTTTCTTCCTCTGCCAGACGCCTGCCCACAACCTTCTTGCAGATTCAGCAGTGAACGTCACGTTCTCCACGCACCTGTAGCTCTTTCTACCACCCCCTAGGCATGTAGGCATAGACCAGAAAGGCTGTGTCTGATTCCTCTCTATGACACCTGGGCCCGGCACGTAGCGACCCGTCCACAGAGGGGCCAGAAGAATGACTTGCCGAGGCCGCGAAAGCACCGCGGGGTTTCCTCGGAACCAGCCCCACCTCTTTCTGGGTAGGATCCCAGTTGCTGGGCCCGTGACACTCAGGGCAAGACGCCCACCAGCCCCACTCCCTCCAGAGCCAGCCAGTGCCTTCCCATCCGCCCATCCGGCTGCAGGCCCCCATCCCCACGCCCCCACCCGACACCACGCAACCTCGTCCTAGCGCCTCTCTGGGCGTCACCGCGCGAGCCGCGCCACCTGCGATTGGCCAAACACGGCATAGCGCCATCTCGGCCTACAAGCGGCGCTCGCCCTCATTGGCTGGTGACGGCAGGGGGCGGTGACGGTGGGCGGAGCCCCGCCCCTCTGGTCCCTCGCCGGGGTCGAGCCCAAACGCCGGCGAGGCTCACGCGGCCGGGCGAATAACTAGGCGCCCGGCCGTTACTCTGGTTACTGTGGAAGCGCTGCGCTGGGAGGGCTGCCGCCGCCCGCGAGGGATGCTGGTGATGAGTCGATCGGGAGCCGCCGCCGCAGCTGCTCTCTGAGTGAGGAGCGCCCTGGAAAGTGCCGTTCAGCTGAGTGAAGGTTCGGGGACCGGTGCCTCAGGAGCCGCGGGGAGGAGGAAGTCTGGAGGTGGGGGCTACGCTTCCCAGTCCTGGTGCCGCAGTCTCGAGTCCGAGGCCATCTTTGGTGGGAGAAGGCTGCCCCGTCCGACGTTTGCCTCTGAGCGTGGAGGTCCCGGGCAAGAGAAGGAGCTTTCTCCGCGCTGTCTCAGCCCTCGAGCTTTCCGACCCGGTGAGGCCGCAGTTCCCCAGCGCAAGATATTTCTTTGATGTTTGTCTCCCTGTTGCTCTTCCAGAAGGACACCTGCTGCTAGTGAGAGCAAAAGAGCAATTTCACTGCACAACAAACCAACAACAAAATTTAATACATTATCCGGAATTAACCCCCCAGGACCCCCAGCCCTCCCAGCACTCCCCCACCCCCCATAGATGGATTGCTTGAAAGGGGAGAGTCTGATCGGGAGCTGTTGGAGATTTTTAAATACTCTTCTTTAAATCCTGGAGAACGTTCTCGTCTTCACGTACTTTTATACCAACTTTGTATGATTTTGTAAATTCCTCTGATTTGAATTGTAACCTCGTGACGGTGTTTCCTGGACTTTAGCCGGTCCCCCGCGCTCCTTTTTGGCAAAACATTTTGGGGAGAGCATCTAAACACCAAAACCCTACCAGGGGAAAAAAAAAAAGGATCTCCTGACGTTGACCCGGAGTCACCGAAGAAGCCTTTAAACCATGTGGACTTTTCTCGGCATCGCCACTTTCACCTATTTTTATAAGAAATGCGGAGACTTTGTCTCTCTGGCCAACAAGGAGCTGTTGCTGTGCGTGCTGGTGTTCCTGTCGCTGGGGCTCGTGCTGTCTTATCGCTACCGGAGTGGGGCCCTCCTCGGGCGCCGGCAGAGCGGCTCCCAGTTGGCGGGCTTCTCCTATATTCTGTCAGCCTTGCCTTTCATTGGCTTCTTCTGGGCCAAGTCCCCCGCTGGATCAGAAAATAAAGAGAAGCTGGGGTCTAGGAGGTGCAAAAAAGGGACCAGTATTTCAGAAACAACCTTAATAGGAACAGCAGCCTCTACACTGACCTCTTCTCAAAATGATCCAGAAGTAATCATCGTGGGATCTGGCGTCCTCGGCTCTGCTTTGGCTGCAGTGCTTTCCAGAGATGGAAGAAAGGTGACGGTAATTGAGAGAGATTTAAAAGAGCCTGACCGGATCCTTGGAGAATTTCTGCAGCCAGGTGGTTATTATGTCCTGAAAGACCTTGGTCTTGAAGATACAGTGGAAGGTATTGATGCCCAGGTTGTAAATGGCTACATAATTCATGATCAGGAAAGCAAAACAGAGGTTCAGATTCCTTTCCCTCTGTCAGAGAACAATCATGTGCAGAGTGGAAGAGCTTTCCATCATGGAAGATTCATCATGCGTCTCCGGAAGGCAGCCATGGCAGAGCCCAATGCAAAGTTTATCGAGGGCACTGTGCTGCAGTTACTAGAAGAAGATGATGCTGTGATGGGAGTTCAGTACAAGGATAAAGAGACTGGAGACATCAAGGAACTCCATGCTCCATTGACTGTTGTTGCAGATGGACTTTTCTCCAAGTTCAGGAAAAACCTGATCTCCAATAAAGTTTCCATTTCTTCACATTTTGTTGGCTTCCTTATGGAGAATGCACCGCAGTTTAAAGCAAATCATGCCGAACTTATTTTAGCTAACCCAAGTCCAGTTCTCATCTACCAAATTTCACCTAATGAAACTCGAGTGCTTGTGGACGTCCGAGGAGACATGCCAAGGAATTTAAGAGAATACATGACTGAAAATATCTACCCACAGTTACCTGGTGTTCTTCTTTTGGGAGATGCATATAATATGAGGCATCCTCTTACTGGTGGAGGAATGACTGTTGTTTTTAATGATATAAAATTGTGGAGAAAATTGCTGAAGGGTATCCCTGACCTTTATGATGATGCCGCTGTTTTCCAGGCCAAAAAATCATTTTATTGGGCAAGAAAAAAGTCTCATTCCTTTGTTGTGAATGTCCTTGCTCAGGCTCTTTATGAATTATTTTCTGCCACAGATGATTATCTCCCAATCCTCTGGTTTTAATTGGACACTTCTTTGGCGTTGCAGTCTATGCCACCTATTTTTGCTTTAAATCGGAACCTTGGATTACAAAACCCCGAGCCATTTTCAGTAGCGGTGCTGTATTGTACAGAGCGTGTTCTGTAATATTTCCTCTCATTTACTCAGAAATGAAGTACTTGGTTCATTAAGCTTAAAGGGGAACCATTTGTGAATGAATACTGGGAACTCGCCAAGCCTGCAGTGACTTGGAAGAGAGTGTATATAGCACAGTACTCCTCCTGCTTCTAAAGTGGGAATTCTTGGACCAAGATTGGGATTGATTTGTTTTTGAAGTTATTTTGTATATAAACATACATGTAAATATATACTTTAGTTTGCAATTTCAAATGAAGGGTAAAATAAGATAGATATTTAAAAGAAATGATTGTTACCATAAATTAGTGCTAACATTGAGGAGCTGCGGTTTGTCTTTTGAATTCAGTATTTGGGATGAGTCACTGTGGGACATGCAAATAAAATGAAGAATG EMBV3_25185 CTCATCCCCTGCTGCCCCCTCTCATTTCCCTTTCTTTAATTCTTGTCCCTCTTCCTCAGG Gene BVT0102_403789 - 1 EMBV3_25444 GK000003.2:110777362-110784498 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27463 GTCCGAATCCTAGAACTCCTTCCAGCCCTCACGACTCTGACGAATCACAACAGATACTTG Gene GeneID:281154|FBN1:NM_174053:10_cdna Constitutive 0 NULL GeneID:281154 10 GENE FBN1 NULL fibrillin 1 EMBV3_26515 GAGCCTGAGATACATAGTTGGTGGTAAATTTTGTATGTAAGAGCAAAATTACCAAGAAGC Gene GeneID:539217|SMC2:XM_002689875:2_cdna Constitutive 2 NULL GeneID:539217 8 GENE SMC2 NULL structural maintenance of chromosomes 2 EMBV3_21104 CTACATGGTGTATTTTGTCAGCTTCTTGGGGACGCTGGCTGTGCTTCCTGGGAACATTGT Gene GeneID:280936|SV2A:NM_173962:10_cdna UTR3_Alt 2 NULL GeneID:280936 3 GENE SV2A KIAA0736 SV2 synaptic vesicle glycoprotein 2A EMBV3_11654 TTCTTTGGGACGCTCATCTCCATGTACCTTCAGCCTCCTTCCAGCTATTCACAGGATGTG Gene GeneID:523283|LOC523283:XM_002697490:181_cdna Constitutive 0 NULL GeneID:523283 23 GENE LOC523283 NULL similar to olfactory receptor 1365 EMBV3_17770 CTGCAGGCTGTGCTTAAATACTATGAGGTGGTGGAGAAGACATCCAGTGAGGAGAGATGC Gene GeneID:533105|AKAP11:XM_002691772:359_cdna Constitutive 0 NULL GeneID:533105 12 GENE AKAP11 NULL A kinase (PRKA) anchor protein 11 EMBV3_43374 GGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTTGTCCTGAAGGATCC Gene BVT0102_239229 + 0 NULL GK000003.2:13169801-13627516 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175564 TCONS_00238413 TCONS_00252196 TCONS_00048804 4 XLOC_105345 XLOC_145080 XLOC_155137 XLOC_028935 Coding TCONS_00048804 XLOC_028935 Coding Coding - 13:48853168-48853376 - TSS35980 208 1 TCONS_00048804_1 50 0.985576923076923 1 0 8.72160225577405e-05 5.27014787575143e-05 0.000327340369317546 5.48952639230124e-05 5.20883082300546e-05 1.61811446001245e-05 6.76145822095996e-05 0.000234124262241476 0.000121988861056627 0.00168722534187968 0.000715529932648552 0.000357704783792556 8.16237471930183e-05 0.00100647818064111 0.000355134721746904 0.00469016817265498 0.00200381284493359 0.00482508627068779 1.04500361645916e-05 9.48171892194609e-06 4.25683018840353e-05 0.00357796579872821 0.00403788026123946 0.00292285847898801 3.14065595521467e-05 1.4113511824081e-05 1.19504787697593e-05 0.00107055929463857 0.00175898705213621 0.00206839402259317 XR_226740.1 LOC100300864 PREDICTED: Bos taurus uncharacterized LOC100300864 (LOC100300864), 3e-12 75.2 80.25 0.384615384615385 TCONS_00048804_1 sp|Q68D85|NR3L1_HUMAN NR3L1_HUMAN Natural cytotoxicity triggering receptor 3 ligand 1; 2e-13 64.3 57.45 0.92 0 noncoding 0 0 0 0 -0.0858323533477179 0.497797190062094 0.0302470734706953 0.532395875746837 ATGATTCAACAACAACCTTTCATCTTGGGGGCTCATCCGGGATCCTTCAGGACAAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCACGGCCACGGTATCCATTGGAGGACGGCGAACGGTGGCC TCONS_00045373 . 5' 174457 TCONS_00045373 . 5' 174457 EMBV3_23240 AAAGATCATGGGCTGAAACTATCAGCAGCGCGGCCTCTAGGCCACCTGCCCAGCATTGAT Gene GeneID:516323|TCTEX1D4:XM_002686432:413_cdna Constitutive 0 NULL GeneID:516323 3 GENE TCTEX1D4 NULL Tctex1 domain containing 4 EMBV3_21531 TGGCACAGGATGGCAAGACGCAGTAGCTGGGACTGCTAAGAACTACAATTACAACCAGCA Gene GeneID:618159|DMKN:NM_001082463:766_cdna Constitutive 0 NULL GeneID:618159 18 GENE DMKN NULL dermokine EMBV3_27448 GGTCTGAAACTCAGGGCAACAAAAGCTTCTCCCAAGCATATGAGGTGTAACAGTATATCC Gene BVT0102_130308 + 0 NULL GK000001.2:75895972-76545411 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008696 1 XLOC_004253 NonCoding TCONS_00008696 XLOC_004253 NonCoding NonCoding - 1:76539328-76540918 - TSS5773 1590 2 TCONS_00008696_6 64 1 0 0 0 0 0 0 1.79977459815911e-05 0 0 0 5.17546694712702e-06 1.43974003444357e-06 2.69863032199403e-05 0 0 0 0.00295677067925761 0.000595175679731881 0.00402401413192712 0 0 0 0.000336030035772614 0.000957794766782951 0.000811871223317024 1.30725903605022e-05 0 0 0.000253721659661829 0.000204564942626179 0.000582318263845063 NM_178335.2 CCDC50 Homo sapiens coiled-coil domain containing 50 (CCDC50), transcript 0.0 917 73.37 0.991194968553459 0 noncoding 0 0 0 0 -0.0881641958214672 0.464035820660411 -0.0197856807464446 0.692790113853709 ATTGATGCAACAAATGAATGACTTTATTAAGAGAAAATGACAAGGTTGGTGTTTGCCTCCAACCATTCAGGAATACAAGCACACAGACTTATACAATACTTTGGTTTAAAAATTATTCATAATATCAATGTTAAACCTGACGTTAAAGGAATCACATGGGATGCGAGGTGTAAAAAATGAAGCACTGAAACACAAGCTTGCATAGATGAATAGATGGAGATGTATAAGTGGCACTGAAGGGAGGCCTGAGTACCGGAGAGTCATCACCACCTCAGCCGCCCAAGACACAGGAACGTCTCCAGCACCACGCTTCTCACTTTCTCCAAAGAGGTCATGAGCAGGAATGTGTGCTGTACGAAGGTGAACTGAAATAGTCTGTTTCCATAAGCCTCGTCCAGAAGGATGCACACATACCCGCCAGCACCCAATCAGTCACCTTTAAGGCATCCACAATGTCTCTCAGTTTCATTAATCTCTAGACAGGCGTGTGATTTGAGGTGGCCTCCTCTTTTTCTGAACTGAGGCCAGTAACTCTATTCCATTAAGGTTCTGTGAGAAAACTATGTCAAAGCTGCCTTTCCCCTAGGGCGTGGCTACAAACCGTAAGTGCTTGGGATATAACACTCCACTTGTTTAAACATCCACATTCCAAATGTCAAAGGGCTTTTTACCAAAGCATCCAAAACCTTTTGGGCACTGTGCAGTTATTAATCTCTCTCTCTCAAGAGCGTACTTTTCCAAAATTTGAGACAAATGACAGCACACCTCAAATTTCCTGAGCAACTTGATTCATATGAAAAACTCCTGTACTTTATAATTCAGTACCTTTCAAGATACAACTGTGTTGGGATGGATTCTTCTTAAGGACAACCACATTTACAGAGAATTCTCACTTCGGAATATCATTTTTATACCCTATCATCTCGTAATACTTCATGAACAAATACTACCTTGCTTTCAAGAGGCAGGTGGAAAATACAGCTATTGCTGGGAAATGGCATTTGGCTTTCAGTTGATGGCAAACCTGAAGTTATAGCCTACAAGGATTCCAGCGGCTAATTCAATGAGAAATTTAAAAAATTCTAACATCAAAAACCTTCCGATTATATTTAACAGCTAGAAACTATTTTACCAATGATGGTCTGAAACTCAGGGCAACAAAAGCTTCTCCCAAGCATATGAGGTGTAACAGTATATCCTCTCAACTTTCTCTTTGCTGTCCTTAATCCTTGCTCTTCTGTGAAGGAAATGTCACTCAGACCCTGTCTTTCAGTTCTTCCACTCTTTCTATATGAACCTCAGCAATGAGTCACGGGGCACTAAGTTACACAATTAACTCTGTCCTTACCTGAAATGCTGAAATCAGCACAGTGCCGGCTCCTTAGGCTATGCACATTTACTCAAAAGTCAGAGAAACATTTTCTAGTTTGCAGAGAATACATAAAAACATTTAAGTCTATTAGGAACATATTTCTAGGCAGTGTTCACAAATATTTAAGGGCAGAAAGAGTGATCTTTAGGACCAGACATTTCCACAAATCAACATGATTACTTAGATGACATTGTATTACTCTGTGGCATCAAATGCAA TCONS_00004058 TCONS_00004055 TCONS_00004056 TCONS_00004057 TCONS_00004059 . 3' 1517 TCONS_00004058 TCONS_00004055 TCONS_00004056 TCONS_00004057 TCONS_00004059 . 3' 3106 EMBV3_24117 ACTTGAGTCTGTGGGTTGCAGAAAGAAGGGGGCTGTGTGGGACACGGACTGTGCCTCCCT Gene BVT0102_040381 + 0 NULL GK000030.2:85702894-85708002 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247483 TCONS_00247481 TCONS_00247482 TCONS_00247480 TCONS_00244908 2 XLOC_151336 XLOC_150580 Coding TCONS_00244908 XLOC_150580 NonCoding Coding AWAT2 X:85704375-85707977 j TSS183963 3216 1 TCONS_00244908_9 165 0.0509950248756219 2 0.107470147181339 0.000976142480645265 0.000244900784359715 2.37580720582507e-05 0.000159266833982476 0.000155426971797793 9.50011240883283e-05 0.000179282419456711 0.00011264628076352 0.000223258084443135 6.90864981187265e-05 7.11789138557288e-06 0 4.32552150222235e-13 6.72590712121604e-06 1.64269851158583e-12 0.000706396967429098 0.000474939563784422 3.81716610886554e-05 0.000464695264438794 0.000487542990779694 0.000717149270208365 0.000278696899109974 0.000216029272464284 0.000139474349013902 0.000995106843763835 0.000403066656256632 0.000538676420599529 0.000131369691927405 1.55048521049416e-05 5.19687019674094e-05 XM_005228032.1 EDA PREDICTED: Bos taurus ectodysplasin A (EDA), transcript variant X1, 0.0 3231 100.00 0.556592039800995 NM_001005612.2 EDA Homo sapiens ectodysplasin A (EDA), transcript variant 5, mRNA. 0.0 1251 75.01 0.554726368159204 0 noncoding 0 0 0 0 -0.0519005093691677 0.731341801078057 0.0813751630923785 0.164566717172217 GAACAAGGGGAAAAAGCTTTATTTGCAAAGAATAAACCATTAATTTACACAAACTTACATCCCGGTTTATATACATTATGTATAGTTTATATACACAGTATCTCACACTGGATGCTGATCCCCAAAGCAGCATCGGGCCTGCTCCAGGCCACCCTCACCATGCAGCCCTTCTCCCATCTCAGCTGGAAGCTTTCTGACTAAAGAAATGACATATCCCAACTCCACTTGGAGAGAACCCTAAAATGGATTACAAGGAAAAAATCCAGTTCTTTTTTGTGCTCACACGGCCTAGGTTAGACTTCAGGCAGGGGGGAGTCCTGAGGTAGCGCCAGGACTCCCTGCAGTTGGGCCTGTCCAGAGGCTTCCATCCTGAGGCAGAAGCTGGGGGAAGCGCCCTGGGGAAGGAAGCACTTTGACAAAGGCTGTGGCCACGCATTCCCTGCCTGACCAGGCTCCGGAAGGGGGCCAAGCACTTCCAGACTTGAGTCTGTGGGTTGCAGAAAGAAGGGGGCTGTGTGGGACACGGACTGTGCCTCCCTCACCTTGCTGAGTCTGGAGGTTGGGGCCCCCACACCTCAGGAAGGTCACCTTCCCACTCTGGACCTCAGTTTTCCACATGGGTAGGGTAGAAGGTAGGTTGGGCTAGATTACTTCTAAGGGCCTCTTGAGTTCTTAATTTCTCTGAATCTATTTGCATCCACCAGAAGTTACATAAAACACACGTATTCACACATGGCTCAAACTCTTTGTTCACCTTCAGGGTTCCTAGCCCTTTATTGCTCATCAAAAGAGATTTGGCTCAGGATGGATGAAGGGGGTCCCCAACAGCTGCCTTTTGTGCCAGCTTTGGCTGTTGGAGCCGGAGCAGCTGGCAAAGCCCCCACTACGCAATTCTCCTTCAAACCTCTGTCATCTGCTTGCTCACAAATGTCCTCATCCCATCCTCCGTGCTAGCCTCAGCTTTCTAAAGCCATGTTGGTGTAATTCCAAGGGGTGAATCTAGCTCCACATTCTCTTAAGAGTAAATGACTTCAATAACTTTGCAGCAACAGGGCTCCCCAGCTACCTCTTGCTTCCCTCATCATCCCACTCCCTCCAGAGCTGTATTTGAAGGGTCACAATGAATAAGAGTCCTGTGTGAATCCCATTTTCCCTCTAATCCCCTCCATTCCTAGAGAAGAGGGTTGGTGTCAGAATGCCCTTTAGTGGTACAATTAGGAAGTCTTTTGCTTCCCTCGTCTCATCCAGACCTCTCTTGGGTTTTCTTTGCATCCCTGAGAGATCCTGGTAATACAGAGGTCTCTGTGGTATGGCAGAAAGAGATAAGGAGTCACTCTGTAGCTGTGGGAAGTGACTGGCTCCTGTAACTTGTCTGAAGGGTAACCAGAGGAGGCCCTTGTCCACAGGAGGGGCCCCATGCACAGTGGTTGGTTCACTGGTTGGTTCTTTCATTGGATGAAAGAACACAAAGGGTATCTGTTCTGTGGGTACTGGAGGCCTGCTGCTTGGGCATGCTACCAAGACGATTCTTCTGAACACAAAAGCTCTAAGGCCGATGGGAGTTTCCCAAAGAAATGGCCGACTCTTTTGTCCCAGAGCCCTTGGCAGTCAAGAGAAAAGGCATTACCATCAAGGAACGAAAATGAGCCTCTCTGCGTTTCTCCCTAGATTCCTCAAGGATTTGGGGTCCATATTACCATTTTGATTGGTTCTCTCTTGTATTCTAAATTCAAAACAATGCTGGGGAAGAACAGAAGAGCTTCACAGTCAGACCTGGTTGAAAGCCCCAGGAAATTTGTTCCAGGAGTAAAAGTAGCAGATTCTACAAGACTGGCTCTCTCAGCTTTGGGCTACAGACCCAGCACCCAGACTGGGCCCAGACAGTTAGAAATAAGACCCTTGAATGATCCTATCATGATTCGATGGGAAGCTTGAGGGTGGGGGAAAGAGGTCTTTGGGCCTGACTAGAGGGCGCAAGCCTGCCCATTGCCTAGACACTGCCTCCTCTTGAGCCTGGATTCAGGGAAGCAGCACTGGAATCTATGGTGACTCTTCTGTGCTGTGGTTTTCTGGAGCCAGAGAGAAGAAAGGGGGTGGTATGTGATTAGTAGGGCATCAGTTGTTGTCCTTTCAGACAAGGTCTATGCTAATGACCACTTGGATTGCAATACACTTGAAGAAAATCCTGTCCTATCCCCAGCTCTTACCCTTTCTGGGTCTGATAAAAAGCTCTGCCTTGCTGATACCCAGGGTCAGTCTAGGGTTTGGGAATTTTAGTAGGCTAGCATGGCAGCTGCCTAGATACTAGAATTTGAAGGCACTTTTGGAGGTCATCCAGTCCAACTCTTTGTCCCCAGACGTAACTCGGACTAGATGAATATTTGTGCTGCTTAATACATGGATAACTTCCTTTGTGCCCAGGTAATCTAAAGAGTATCTCAGACTCGCACAAACACAGGTCCCGGGATAGGCACCAGTCTCAGTCAGAGGTAGGCTCTGGCGAGGGAAAAAAATGGGAGTTCTCACCAGGCTGGGAAAGGGACAATTGTGCAGGCACCCGGGCAGTTTTCTGAGCTTGGAGCACAGGTGTAAACAAAGTGAAAGACATGTGGCCCCAAGCATGGCCTCTGGTTCTTATACAGGCAGGTGTATGGCCATGCCCTGCAACTGCTTCAAGGAAAAGCAAACCTCTCCCCAAAGCCCTGCCAACTGCTGGCACACGGATCAGTGAGAGTGGGAAGACCATCTGGCAGGCTTCTGCCCTGGTTTCTGTAACAAGCACCTGCATTTCCTTCCTTGCCCCTTTCCTTAGGCTGCAACATTACCATCCTACCCCACATGTACCCTTCGAGGTCAAAGGCTTGCCCCACAGTTTGGGCTGTACTGTTGCTACTTCTCGCGTGCTGCCCAAGCCCCTCACTTTAGTGCAACAGAATGACACCAGGGACCTTGAGGTTGTAGTCATGCTAGAAGCAGTCAATGGGGAGCCAAGGAGGAAGGTTCTGCTTCACGCCAACCCTGGGGCTTCATCAACTGTCCTGTTCACTCCAGGTCAATCTGGAAAGTCAAGTTGGCCTTGTCATCTTGGAATTACTGGGGAATAAATAGCACTGGGAAATTTTTCTCTGCGGCTGTGACACCCACATACCTCATTCCACAGCAGCACTTAGAGGTTCTGGGAGACTTAGCTCCCTAACCTGGGGTAGGGACATGGGC EMBV3_26215 AGTCTAGTATGGCTGCGGATCCCTGGCCTGGGTTTTCTATCAGATGATCCATCGTAATAA Variant GeneID:507308|PHOSPHO2:NM_001045965:211_cdna 87^204 2 EMBV3_37186 GeneID:507308 2 GENE PHOSPHO2 MGC137346 phosphatase, orphan 2 EMBV3_21178 TCACCCAAGTCCAAGAAACCCAGAGAGTACCAAACAGGATAAACCCAAGGAGAAACGCCC Gene BVT0102_014830 + 1 EMBV3_19798 GK000019.2:12538314-12570162 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00020011 TCONS_00064058 TCONS_00238893 TCONS_00156637 TCONS_00251214 TCONS_00249013 TCONS_00115687 TCONS_00040697 TCONS_00141680 TCONS_00233559 TCONS_00115729 TCONS_00240534 TCONS_00238308 TCONS_00220662 TCONS_00160965 TCONS_00022065 TCONS_00187806 TCONS_00032588 TCONS_00252354 TCONS_00020016 TCONS_00210648 TCONS_00232347 TCONS_00189889 TCONS_00157441 TCONS_00250931 TCONS_00108588 TCONS_00160991 TCONS_00251452 TCONS_00201770 TCONS_00040584 TCONS_00253720 TCONS_00207754 TCONS_00135548 TCONS_00056147 TCONS_00187583 TCONS_00019991 TCONS_00249282 TCONS_00189806 TCONS_00190337 TCONS_00170310 TCONS_00229354 TCONS_00152647 TCONS_00079671 TCONS_00175849 TCONS_00056970 TCONS_00224114 TCONS_00230725 TCONS_00036946 TCONS_00148670 TCONS_00062742 TCONS_00255185 TCONS_00165812 TCONS_00199613 TCONS_00117462 TCONS_00019962 TCONS_00008834 TCONS_00020022 TCONS_00175821 TCONS_00232966 TCONS_00198661 63 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_010689 XLOC_038784 XLOC_145559 XLOC_095097 XLOC_154157 XLOC_151956 XLOC_069856 XLOC_024513 XLOC_086108 XLOC_143041 XLOC_069898 XLOC_147198 XLOC_144975 XLOC_133979 XLOC_097858 XLOC_012736 XLOC_113849 XLOC_018828 XLOC_155295 XLOC_010694 XLOC_129158 XLOC_141832 XLOC_115926 XLOC_095896 XLOC_153874 XLOC_064493 XLOC_097884 XLOC_154393 XLOC_123415 XLOC_024400 XLOC_156659 XLOC_126269 XLOC_081771 XLOC_033950 XLOC_113628 XLOC_010669 XLOC_152225 XLOC_115843 XLOC_116372 XLOC_103556 XLOC_138849 XLOC_092412 XLOC_048555 XLOC_105628 XLOC_034773 XLOC_137410 XLOC_140215 XLOC_021259 XLOC_090550 XLOC_037469 XLOC_158117 XLOC_100652 XLOC_121266 XLOC_071628 XLOC_010640 XLOC_004391 XLOC_010700 XLOC_105600 XLOC_142448 XLOC_120315 Coding TCONS_00229354 XLOC_138849 NonCoding NonCoding - 8:2557529-2558613 - TSS170858 1084 1 TCONS_00229354_2 118 0.997232472324723 1 0 2.51027591171023e-06 0 2.13423121305016e-06 0 0 0 1.84450574633871e-06 0 0 6.46362951175192e-05 3.99413746252622e-05 1.55532181485613e-05 1.35645042964244e-05 0.00014489275163546 5.78133364332646e-06 0.002164817523245 0.00318171808389475 0.00462562329167112 0 3.31707035394452e-06 0 0.00320644011591593 0.00184796150768437 0.00222080368255703 0 6.49950411920376e-07 0 0.000293836862500732 0.00101979446118106 0.000306281287184322 XR_229156.1 LOC101907943 PREDICTED: Bos taurus uncharacterized LOC101907943 (LOC101907943), 2e-79 300 80.47 0.310885608856089 0 noncoding 0 0 0 0 0.044186773713356 0.68151882467206 -0.00421894400467007 0.937197478317913 GGGGTGTTTCACCTTGGGTTTATCCTGTCTGGGACTCTCTGGGTTTCTTGGACTTGGGTGGCTATTTCCTTCCCCATTTTAGGAAAGTTTTCAACTATTATCTCCTAAAGTATTTTCTCATGCCCTTTGTTTTTGTCTTCTTATTCTGGGACTCCTATGATTCAAACATTGGGGCCTTTAACATTGTCCCAGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCCTTTTTCTTCTTTCCTCTCTGCTTCACTTACTTTCATCATTCTATCTTTCACATCACTTATCCTATCTTCTGCCTCAGTTATTCTACTATTGGTTCTGAAAGGTTGTTGTTGAATCACGCGAAGACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGCGGCAGAAAGAGTACCCGCCTGCTAGTCTTCAGCTGGATGTTATATAGTCACTAGTAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGAATGGCACCAGGCCCCTCACTCATAAGATGCATTTTGGGATAGTCTTGGCGCCAAATGGTTTATCCTGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGACAGATCACCATACAAATAGTTTCATTTACATAGATTAGGAGAACAATATCCATACTGGTTTGTCAAGTAGGTTCTGGGCCAAGAGGCGGAACCAACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAAAAAGGCATTGGTTATCTCTAGGCTCAAGAATAGCTAACTTCAGGCGAAACCAGGTGTCATTATGGCCACACAGTATTTTAAGAGAAACCTCCCTTTAAATTTGTATAGAGAAGGAAAAAATATTGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGGCTATTTCCTCCATTTGGAGACCCCTGGCCTTCCTGCCTGTTACCCTCTCA TCONS_00226773 . 5' 692321 TCONS_00226773 . 5' 692321 EMBV3_14533 TGCTGGCAGAAGCCATATCACAGGAACGTCAAGAGCTCAAAGCCAGAGAGAAATCACAGG Gene GeneID:506840|CCDC45:XM_002696103:176_cdna Constitutive 0 NULL GeneID:506840 19 GENE CCDC45 NULL coiled-coil domain containing 45 EMBV3_34565 CTGCAGAAATCCTCAGCCACCACACAAACCTCCACTGGCCACACCAGAGTCCTTGGACAT Gene BVV0101_038944 + 0 NULL GK000021.2:66253520-66284692 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125310 1 XLOC_076852 NonCoding TCONS_00125310 XLOC_076852 NonCoding NonCoding - 21:66257352-66257596 - TSS94069 244 1 TCONS_00125310_1 35 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000314924329631557 0.000298439071908199 0 0 noncoding 0 0 0 0 0.20622451248673 0.133485958077068 0.0237152168433884 0.657852416612252 GTCTCCACAAAGCTCAGATCACTGAGTGCACACGTATGGGCAGTGTTCAGAGGGTGGTGGATGTCCAAGGACTCTGGTGTGGCCAGTGGAGGTTTGTGTGGTGGCTGAGGATTTCTGCAGGTCAGCGAGGCGATGGCAGCTGACAGGTCCGGGGCCGGGCTCTGGGGCTTCTTCTCTGATCCCACCCTGCACTCCTGAGCCGGGGAAGTCACCATGCACAGCTGAGAGGCCGCAGTGAAATCAG TCONS_00121864 TCONS_00121865 . 5' 3834 TCONS_00121864 TCONS_00121865 . 5' 3834 EMBV3_18289 CTTTCCCACGAAATCGTCCTGGATCTGGGTCTGGGCACCTGGGACTGGTTTAGCGAAAAT Gene BVT0102_073460 + 0 NULL GK000007.2:82590658-82625368 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217812 TCONS_00217809 1 XLOC_131583 Coding TCONS_00217812 XLOC_131583 NonCoding Coding - 7:82595597-82597991 - TSS162110 2394 1 TCONS_00217812_4 133 0.37719298245614 1 0 0.000583759984293266 0.00037356245755311 0.00367323085777561 0.000659059449774772 0.00116726946712142 1.76624343433236e-05 0.00023385279097881 0.000655292761686657 0.000497664956388796 0 1.06273669850708e-33 0 3.86443501084714e-106 2.18322975253267e-07 2.45924809095008e-05 0 0 0 0.00115521738393277 0.00853425617831176 0.000576966353786261 0 0 0 0.0014702023524063 0.00258098476371913 0.0008296785968411 0 0 0 XM_005219714.1 VSTM1 PREDICTED: Bos taurus V-set and transmembrane domain containing 1 (VSTM1), transcript variant X2, mRNA. 4e-55 221 85.35 0.081453634085213 0 noncoding 1 0 1 1 -1.0228775874774 0.0638850878520209 0.0365299425023095 0.529835834626843 GGTCATAGCTTTTCTTTTAAGGAGCAAGCATCTTTTAATTTCATGGCTGCAATCACTATCTGCAGTGATTTTGGAGCCCCCCAAAATAAAGGTGGGTGGGGCAAAAAGAGAGGTGGTCTGTCCTGCTCAGGCTGGAGCCCTGATGAGGACTGTGTAGCTGGCCAGGTGCCAGGTGATCACCCCCTACCTTCACTACCCTCCTAACTGAGAACACAGGTAACCCCGACCCCACCAAGATCCTTCTATTTCATTCTCTGGGAGGGTGACCACTGGGTTGACTGTTCCTATGGGGGGTGCAGGCATAGCTTGTTTTCCTCTTGCCCCAGGGTCTGCTAGCTGAGCACCTGCTTATTGCTTTCTGTAGTTTATGTGTAGGGCGGATGGAGAGGGAGTGGTGACCTTTGCTCTTTGACAGGTCAAACTTCAGGACTGGGACTGTGTCTAGCTAATCTCGGGACAGGAGCTTCACCTTCTGTCCTCACAGGCTAAGAGTAATCATGCTTCATGTTGGATAAATAGTCATCCCTATTTGCCAGGCACTAAGCTGGGTGTTAGTTACAGCATCTCCCTGTGAGATGGGATCATCATACCCATTTCATAGGAGGAAAGTGAGGCTTCAGAGGTTAGGTAAAGAGCCCAGGCTTAGCTAGAAATGGGGGCAGTGGGATTTAAATGGTAAAATGCTGTGAAAGGAAAACAGGGCATCATTTTGGGGTTATAGTCTTTGGAGTAGAAAATAAAACTTTGGAGCTTCCCTGGTAGCTCAGTGGTAAAGAACCTGTCTGCTAATGCAGGAGACACAGGTTCCATCCCTGATCTGGGAAGATCCCACATGTCATGGAGCATCTAAGCCCATGTGCCACAACTACTGAGCTTGTGCTACAGAGCCTTCGAGCTGCAGTGACTGAAACCCATGTGTCTAGGGCCTGTGCTCCTCAACACAAGAAACCATTGCAATGAGAAGTCCACATACCACTAGAGAGTACTTTTCACTCCCGCACCTAGAGAACAGCCCGTGTAGCAACAAAGATCCAGTGAGCCAAATAAATAAATACATAAAATTATTTTAAGAAAAAACAAAAATTTAAATCCCAATTTTGTACTTGCCAAGCACCTCATATTTATTATTTTTGTAACTCTTTTCAAATAATCCTATAAAGTAATTTCCCCCCATTTTGCACCTGAGAAAACGGGTTTCTCAGGAAGGGGAAGGTTTGTATGAAAATCTACTCAGGGAATAGGTGGTGGAGCTAGGCTCTGAATCCAGTCTGGCTGTTCCCAGGGCTAATATTCTTTGGAATCTTGCTTCCTGGAACCGATTCCAGGGGCCTCTCTGAGGGCACAGGACTCTTTTCTGGGCGCAGGGCTTTTTTGGCTGTCTCTTGATTCTCAGAGTGGAGCTAACATTTTCGCTAAACCAGTCCCAGGTGCCCAGACCCAGATCCAGGACGATTTCGTGGGAAAGGCTGCCACCTTGTGGCCAGACAGCGAGCATGTACCAGGAGGAAGCAAGGGTTTAGGAGGGTGGGGCTTGGGCAACAGGTGAGGTCAGTCTCTGGAAAGACTCCAGCTGGTGCAGACTTGGTTTTGGAGGGCTGCCTCGCCGTTGGAGGGCCAGCTTGGGCCTCAGAGGGAGGGTTCAGGCTTCCCAGCAGTTTCAGGATGGATGGTGAGGCTTGGCTGTGGGCACACTGGATCAGAATTTTCCTGCCAAGTCCTGACGTGAGCCCATCAGAGGAATCCTGAAGGTAAGCCTAGGTTAGACTTCTTATGTCCTTCTGAGGCACTGGTTCTTTTAGCTGTGTGGAGAGGCCATGTTGTGTCTGTGACACTTCTCCTGCAGGACACCCTCGGAGCTTCTGGACTGAATCCTGCCTGAGCTCGACCCTGTACCGACACTGTCCCCAGCTCTGAGGGAGATACAGAGCCTCCTCCCCCCTCCAAAACCTAATCCTGTGTATCCTCATCATCTGGGCTGATGCAGCCTCCCAGACTCAGTTCTTTCTGCTTCTCTCCTCTCTCCACTTTGCTAGTCAAAGGATTTCCTAGTAATATTTTTCACCAGGTGCAAGAGCCTTGTGCTTCCCTGGTGGCTGAGAGAGTAAAGAATCCGCTTGCCAAGCAGGAGACGCGGATTCAATCTTGGAGTCGAGAAGATCCCCTGGAGAAGGGAATGGCAATCCACTCCAGTATTCTTGCCTGGGGAATTCCAAGGACGGAGGAGCCTGGTGAGCTACAGTCCATGGAGTCGCAAAGAGTCAGACACGACTTAACGACTAGACAACAAGAGCCCCACTGCACACTCCTCGCAGTATGGAAGAGGACGTTGGGCTTCTTAGCCTGGTCTTCCTTCCTGCCTCACTCCGACATCAATGTGTGAGGCCACGTACCTCC TCONS_00214305 TCONS_00214316 TCONS_00214319 r 3' 4941 TCONS_00214305 TCONS_00214316 TCONS_00214319 r 3' 7334 EMBV3_43269 CAGTCACTACTTTGAAGAAGAGTCAGAACAGCCAGGGGGCCTGGAGACAGAGGATGACCC Gene GeneID:515472|RECQL4:NM_001098037:95_cdna Constitutive 0 NULL GeneID:515472 14 GENE RECQL4 RTS RecQ4 RecQ protein-like 4 EMBV3_34574 TGGAGATGATGACGGGGAAGCCACGGGTGTGAGGGAGGAGGAATATTGAAATGTCACACT Gene BVT0102_150427 + 0 NULL GK000013.2:43508181-43526440 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042775 TCONS_00042771 TCONS_00042772 TCONS_00042774 TCONS_00042773 1 XLOC_025760 NonCoding TCONS_00042771 XLOC_025760 NonCoding NonCoding - 13:43518291-43523511 - TSS31777 2006 2 TCONS_00042771_3 100 0.56580259222333 3 0.616210001916076 2.1151851246327e-08 0.000379481229392578 2.78733223945702e-05 0.000273195991193166 0.0011444484239647 0.000643526899290246 0.000453498253137636 1.98656636863767e-11 0.000146943469194959 0 4.55934091262156e-06 0 8.35957880650329e-12 0.000246209322840923 8.41948381236765e-14 9.21034079137321e-05 0 0 0.00123054353587802 0.000648859747340541 0.000342004047604356 0 1.42197564803797e-10 0 0.000279233426951677 0.0014434950474479 0.000118369182128551 4.76502689606808e-06 0 0 XR_234757.1 LOC101905166 PREDICTED: Bos taurus uncharacterized LOC101905166 (LOC101905166), 5e-65 253 87.80 0.101694915254237 0 noncoding 0 0 0 0 -0.144687599159281 0.209566944328961 -0.00704295466632435 0.891664069226757 AACTCTGAGGACAAGTCTATCCTCCGTTGTAAAGTCAAGAGATTGAGTAAGAGTGGGCTGTTCAAGAAAGCTGGAGTCAGCTGTGTCTAGTTCAGCTGCGCAAGAGTCAGCGGTGTCCAGTTTGAGCTGAGCTGGTTGAGACTGGCTGGGACCACTGACCTTTCAACTGAGTGTGCGAACATGCAAAGGCCTGTTGCTGAGCTATGCCTGCACAAAGCGACGACCGGGACACCCTTTTCTATCACCTTTCCCCACGGTCCCGTGTCTCAGACGACCTGCTTCTTCAGTCTTCATCCCATAAACACATAAGCCCCTTGCCTGAGGGGAACCGGATTTGGGGTTTGTTTTCCCATCTCCTTGCTTGGTGGCCCTGCTGATGGATCCTCTCTTTGCTGCAGACCTTGGTGTCTCAGTGTTTTGGGTTGCGGTGCACCCAGGTGGGTGAGAAGCTGAGAGCTGAGCATCACACCTGGAGATGGAGCCTGGCGGGAAGACGAGCTCATGTTGGCAAAGCTGCATGCTGGCAGATAACAGCCTCTTTTCCAGCCCTGGGGCAGTTTCCAGCTTCTCCAGTCACGTTCAACCCACAGCTGTAGCCGGAGAAGCCAGAGGGGAGAGAGCTACTCCAACCATGGGAGGAAGCCTGCTGCTTCCGGATCCCATCATAGAGCCCCGCTGGGGAGGGGCCAGAGTGGGAGCCCCCCACGGTCCTCCATCCTCGAGCGCAGAGGAGATGGGAGAGAGGCAGCGGTCTCTGCCTGGGGCTGGTCCACCCTAGCTCAGCTGAAACACAGGCTTCTCCAGCCCCGAGTCCATGGGGTTGGACAGAAGGCAGTTTGGGGCCCCTCCCACCCAGACTGTGGGGCAGGCCCAGGACGCATGCCTGTCGTAGATGCTGGCCCTTCAGGAGTGGCTGCCCTGGGTAGGTTGGGGCTGGGATGAAAGCCTGAGGCCTGGTCTCTGGGTCACTGTGTTGGGTAACTGCTGGCCATGTTTGTAGAGCATGCACACTCTTGTGTTCTGATCTCTGCAGACCGTCCTTGAAGGATGTGTGCTCCTGGGTCTGGGTAATGTTTTTCCTTTCTCTTAAAAGATAGACTTCTAAGAGCAGCTTTAGGTTCACAGCTAAACTAGGTGGAAAGTGTGACATTTCAATATTCCTCCTCCCTCACACCCGTGGCTTCCCCGTCATCATCTCCACCGGTTGGTACTTGTGTTACAACTGATGACCCCACATGGACATGTCATTATGACCCAGAGTCCACAGTTGACATCAGGGGTCACTGTAGGTGGTGTGTGTCCTGTGGGTTTGGCCAAACAAATAATGACACGTATATTATACATCAATACAGTATCATACAGAGAAGTTTCACTGCCCTAAAAACTCTCTGTTCTCCACCTGTTCATCCCTCCCTCGCCACAATCCCTCAAAATCAGACCTTTTTATCCTTGGCATATCTTGCCTTTTCCGTGACATCAAACTAGTTGCAATCATATAGCGTGTAGCCTTTGTTTCCTCCATGTCTTCATGACTTGACAGCTCGCTTATTTTAGCATGTAATAATATTCCCATCTGGATGCCCTGTAGTTCATTTATCCATCACCTACTGAAGGACACTTTGGTTGTTTTCAAGCTTTGGCAATTATGAATAAAGTCACTGTGAAAAAGCACCCATGTGCAAGTTTTTGTATGGACATGAGCGTCTTAAGAGGCAGGGAGGTGGTTTACTATCTGGTCCTTGCTGGAAGCTTCCCTTGTAGCTCAGTTGGTAAAGAATCTGCCTGCCAATGCAGGAGACCAGTGTTTGATCCCTGGGTTGGGAAGATTCCCTGGAGAAGGAAATGGCAACCCACTCCCGTATTCTTGCCTGGAGAATCCCATGGACAGAGAAGCCTGGCAGGCTACATTCCATGGAGTCACAACAGTCGGACATGGCTTAGTGACTAAACCACCTTGCTGGAAGGTCTCAGGGTCGGGCTGCGTGGAGAAGCTTCCCTGGGGGACC TCONS_00045259 TCONS_00045260 r 3' 2652 TCONS_00045259 TCONS_00045260 r 3' 7871 EMBV3_38597 GTCCACAGCCTCTCACAGGGACACTACTGACACCTCAATCGGCATTATTTGATAGATACC Gene BVT0102_014934 + 0 NULL GK000011.2:72573335-72582293 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028401 TCONS_00028402 1 XLOC_015467 Coding TCONS_00028402 XLOC_015467 Coding Coding TMEM214 11:72579813-72590668 = TSS19933 5385 1 TCONS_00028402_5 687 0.129062209842154 17 0.505435784042749 0.000307821404144897 0.0021614612389626 0.00106161860789799 0.000220344091286824 0.00141845326865574 6.49986166429817e-05 0.000399417281667385 0.000203978418141585 6.86515748313278e-05 5.32569657890044e-05 8.17642159929569e-06 2.82572879547823e-06 2.60911144920025e-05 0.000249439278238117 5.50700560765359e-05 0.000229323964614961 3.93498303648226e-05 0.000156509978978959 0.000269268253087185 0.000788277906877715 0.000392660555275938 2.06955413341447e-05 4.42299694893694e-05 1.33804774922609e-05 0.000581279101075234 0.00068941612154856 8.36287035334977e-05 9.29679547157489e-10 3.84895425045868e-06 0.000718059188383919 NM_001083432.1 TMEM214 Bos taurus transmembrane protein 214 (TMEM214), mRNA. 0.0 5240 100.00 0.539275766016713 NM_017727.4 TMEM214 Homo sapiens transmembrane protein 214 (TMEM214), transcript 0.0 3016 83.01 0.540018570102136 TCONS_00028402_5 sp|A4FV45|TM214_BOVIN TM214_BOVIN Transmembrane protein 214; 0.0 1406 100.00 0.998544395924309 1 coding 0 0 0 0 -0.385576940148455 0.0167938725895112 -0.0211735321180688 0.738173673804579 GGCGGCCGTGGCGGGAGGGTCGGAGCCATGGCGGCGAAGACTGCGGGTGGGGGGCGCTGGGAGGTGGTGAAGAAGGGGCGGCGGCCTGGGGCCGGCGGCAGTGGTAAAGGCGGCGGAGGGGACCGCCGGGCGCTCGGGGAGGCGAACGGAGTGTGGAAGTACGACCTGACCCCTCCAATCCAGACGACAAGCACCCTGTATGAGCGGGGCTTTGAGAAAATCATGAAGCGGCAGAATAAGGAGCAGGTTCCACCTCCTGCTGTGGAGCCTAAGAAACCGGGGAACAAGAAGCAGGCTAAGAAGGTGGCGACCCTCACCAACCAGAACCAGAAGCAGGGACGCTTTCGCAGCCTGGAGGAGGCACTGAAAGCTCTGGACCTGGCAGATCTGCAGAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGGAAACCCATCCGTGTGGTTGAAGGACCTGGCCAGCTATCTCAACTACAAGCTCCAAGTACCTCCGAGTGAACCCACACTTAGCCAGCATCCTCACGATTATCCCTACAGCCTGGTGAGCCGGGAGCTGCGTGGCATCATCCGAGGGCTATTGGCGAAGGCTGCGGGATCCCTGGAGCTCTTTTTCGACCATTGTCTATTCACCATGCTACAAGAACTGGATAAGACTCCAGGGGAGTCACTGCACGGTTACCGCATCTGTATCCAGGCCATTCTGCAAGACAAGCCCAAGATTGTCACCACAAACCTAGGCAAGTTCCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCCAAGTGTCTGACTATCATGTGGGCCCTGGGTCAAGCAGGTTTTACCAACCTCACCGAGGGACTGAGAGTGTGGCTGGGGATTATGCTACCTGTGCTGGGCATCAAGTCTCTGTCTCCCTTCGCCATTGCATACCTGGATCGGCTGCTCCTGATGCACCCCAACCTCACCAAGGGCTTTGGCATGATTGGCCCCAAGGACCTCTTCCCACTTCTGGACTTTGCCTATATGCCCAACAACTCCTTGACTCCCAGCCTGCAGGAGCAGCTATGTCAGCTGTACCCACGACTGAAGGTGTTGGCATTTGGGGCAAAGCCGGAATCCACGCTGCATACCTACTTCCCCTCCTTCCTGTCCAGAGCCACCCCTGGCTGCCCTCTGGAGATGAAGAAAGAGCTCCTGAGAAGCCTGACTGAGTGCCTGATGGTGGACCCCCTCAGCACCAGCGTCTGGCGGCAGCTCTACCCCAAGCACCTGTCACAGTCCAGCCTGCTGCTGGAACACCTGCTCAGGTCCTGGGAGCGTATTCCCAAGAAGACACAGAAGTCATTGCAAGAAACCATTCAGTCCTTCAAGCTTACCAACCAGGATCTGCTGAGGAAGGGCGGCGGCAGCAATCAGGATGTCGTCACCTGCGACTCGGCCTGCAAGAGTCTGTTGCAGCAGGCTCGGGGCTTCCAGCTGCCCTGGACACGGCTACTTCTGTTGGTGCTGGTCTTTGCCATAGGTTTCCTGTGCCATGACTTCCGGTCACACAGCTCTTTCCAGGCCTCCCTTTCTGGCCAGCTGCTTCAGTCATCTGGTGTCTTGCCTGCTGGCCAACAAGCATGCACCAAGATCTACTCCTATAGCTTGCAGGGCTACAGCTGGCTGGAGAAGACATTGCCAGCTTGGGGCTCCCACCTGCTGACTGTGGTGAGGCCTGGCTTGCAGCTGGCCTGGGCCCACACCAATGCCACCGTCGGCTTCCTTTCTGCCCACTGTGCCTCACACCTTGCCTGGTTCGGTGACAGCCTCGCCAACCTCTTCCAGAGGCTACAGACCCAGCTCCCTGACACCCTGAACCAGCTGCTCCGTTCTCTGAGGGAGCTGCTCCTGTTTCTTTATCACAGCATCCTGCTGCCTACGTGGCACATGCTGCTTGAGGCCCTGGCCCAGATCCAGGAGCACTGCCATGAGGCATGCAGAGGCGAGGTGACTTGGGACTGCATGAAGACACAGCTCAGTGAAGCCGCTCACTGGACCTGGCTCAGACTACAGGACACCACAGTGGCTTTCTTGGACTGGGCACTTGCCATGATATCCCAGCAGTAGGCCCTGCCTCCCTGGCTGCTGGGCTCTGTCTGGAGCAGACCCCTGGAGACTGTTGGGGCAGAGAGTGGCAATTCTGCAGGGGAGTCTTTGTTACTTGGTGCCTAAGTTCTGTCTCCTCAGCAAGTGGTAGGCTGCCTCTGCCTCAGTTCTTCCGGTTTGGTGGCAGCGAGCCCAGAGGTATCTCAGCCTCCAACCCACGACTCCACTGACCACTGCTCTGCCCGACTGACTGTACATGGCTCCCAGCCTTTATCCTTGGGCCTGGTAGCCTCTCTTGTCTCTGCTCTCCACTTCCTTCTCTCTCATTCTTGAAGCCTCAAACAGCTCATCTTGAAAAGGTGGACTCCAGGAAGTGGCTTCTGCATTCTTCTGACAAACGATTCCTGCTCCCAGACCTTAACCACGGCAGAAAAAAAAAAGGGACTTCTAGAAGAATCTAGAAGAATGTAGCACCACAGTGGGTGGTAGCAGCTTTGTCTCTGCCGACAGTCTGGGTGTGGCTGTCCGTGGACATGTAGGCCTGGGTGGAGAGGCCTCTCACCTCAAAATGTTCAACTTAGGTCCTTCAAGGCTTCTACTGCTCCTGTCATTATGGTCCTACATCCTTGCTCTCTGTCCCCCTTCAGTGCTGGGGGCGGTCTCAGCCTCCGAGTTCAGCCCTTCTCCGCTGCCCACCCCTGCCATCTGTCTGGAGAGCAGAGCCCAGGTCATCATGTGCCTCAGGCCCAGGAAATCATCCAGCAACCTGTTGAGACAGGACACAGCATGGGCTTGTGGATATGCCTACTTGATGGAATAAAGGACACAGATTTGATTTCTAGTTTTCCTCTGTGCCTCTTCATACAGAAATTCCTACAGTTGTGGACAGGACGACAAAATGTGAGCTCCTGCACATTCTTTAGCCCTCTGCCCTCCCAAAGGTTGTAGCCTCTGGCCATAGTTGAGCTTCTGGCAAGGAAAGCCTGCTTCCATCATTCTAAAGTTTGGCCTGTCGAGGGTTCTAGACGCCCTACTTGCTCACTTATCATCTCACTTGTCCTTGTGATTCGTGTCCCAAGATTGCCTTGGGAGCTTGAGGATTATATGCCTGGAAAAGTCGGGGAGAGTGTCCTAGAGGAATTCTTGGCCAGCAATCAGAGGATGCCTCCTTCCTTGCCAGGACCTTCATTTATTAATTGATTCATTTTATAGGCAGTGAGTGAAAGATTCAGAACTCCAAGAGACACATGAGTCAAGGGTTTATCACCCATGTCCCTTTTAATTTGACTTGAGACTATAACAAGTCAGCTAACGGCACAAGTTTTTCAGTTCTCACCTGAAGTTTCTTTCCTTGAGTGTTTAAAGAATGTAAGCAGTACTAGAGGTGCACTGCCCACTTTAGCGTCCATGGGCTGAGTTCTGTTTCCATCACGAGCACCTGAGATGACTAGCAGGGGTGATGGCCAGCTGCCGCTTTTCCTTTCACAGACGGCCCTGACGTGCTGCCTCCATTTTTCAGCCACGGGATTATCAAGTAGCAAGCGTAGCAAAATCTTGACACGAAGTCTTGAGGACTGGAACATCTTCCTTTCCTTGTTAGGATGTAACTTACCACGCTGGGCAGAAGCCTGCTTTTGTAGTGGCAGTCAGCTCTGACGATTTTTTCCCAGAAGAAGAAACCCCACCCCACAAAGGACCAAAGTGTAGGCCTGCTGGCAGAACTGTCCACAGGTCCCCAGACATGTTCCATTGCTTCAGTTCTTTACCTAAAGTCAGTTACAGATGGGTTCAATTCTTAAGAGGAGTGAATCCTAGTAACTGGCCTGAATTCAAGACAAATTAAAGAAAATGAGCCAGTGTGAGCTTGGGTTATTGGCACCAGTGCAGGACCATGCCCTACAATGACATCAAGTCCAACCAAGGCTGCTGGACCGGACTTTGAATCCAGCAACTCAGAGAATCCCACTTGCAAGTGCTTCCTTGGTGTCTAATGTGTACACTACTACCTTATTGGATTCATCTAATTTCTAACATGTAATCCTGGGATGCAACATTTTTCTTTAACTCAGGTTAACTGGGGTCTCCACAGCCTCTCACAGGGACACTACTGACACCTCAATCGGCATTATTTGATAGATACCTGATACTGGAGTGGTCAGAACGTTTTCTCTATCCACTGCACCTGCTATCCATTAAAGCTAGATCAGACAATGTAGATATTTCACTTTAGCACAACTCTACAGGAATCCAAGCCAAGCCAGTTAGCTGAACCAGTATAGACTGGTGGAGTACACTGATGATGACAGGCAGGCAGTCACACTGACACCTGGTGTTACTGGAAGTCGACTGACATCTTGAAGATCACTTCTAGACATTTTAACTTTACTTTTCACACACAGCTGGAGTTCTACAGATAACACATCATGTAACTGAAGGGCAGTTTGAGTATTGTTATCTCTTACAAGCTTTAGTTACTAGTTTGACCAGCCTACCAACCAGACCATTCCGTCCAACAACAGCAGAATACATATTATTCTTGGATATTATCTCAACACTTCTTTCCGTTTTTCTAAGTCTCAATGCATATTTTTGGTTTCCTTTGGCTACTTGTACCCTGTCTACAGCTTCAGCTTTAGAACAGGGTGGGTGGAAGGGGAGCCTGACTTACTATGGACAGATAATGTTGCTGGACTCATGCCTGTGGCGTTGCCAGCCTGTTCCCAAATGCCACCACTCTCAGAATGGAGCATTTCCCACAGAGACAGGCATACCTGCTCTGCCCTATTCCAGAGTCACCCAGTTGTCAATTATACAGAAATTTCAATGGTTGAATGACCTCTGAGCATTTAATATGTCTTATCTCTCCTGAAGGAATTTGGATTTAAGTGAACACTTAAAGTGATGAATTGGTTTTCTAATCACCTTGCTGGTTCTGCTCCCCAAAGGACTTGAGGGTGCAAAGGACCTTGCTTTTCTCTATGTGGTGTTCCATTCTTAACCAGTGGTTTCATTGCCCAGACCTGAGGTATAAGAATTTTCACCATTCAGTGTATGAGCAAATACCTATTTAATATTTTACCTATTAGAATTAGGAGTTGAAATGTTGACTATGCCTCAGTATATACTTTAACTATTTAAGTACACAAGTTATTTTTAATGGATTTTTTTATAGCAGTTTTAAGTTCATGTCAAAATTCAGCAAAAAGCACCATGTCATTACGCCTGCACTTGAGGTTCCCCCACTGTCAAATTCAGTGAGCCTGTACCGACATGCCACTATCACCCAGCACTGTCATCTGAAGTCTGTGGTTTACC EMBV3_02749 GTCCTGAGTGAGCTTTTGAAATCAGGTTTTGTGGCAGTGTTCCCTTTATCATGGCCTCAC Gene BVV0102_186386 + 0 NULL GK000014.2:63578174-63592783 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053671 TCONS_00053672 TCONS_00053675 TCONS_00053673 TCONS_00053677 TCONS_00053674 TCONS_00053676 1 XLOC_031795 Coding TCONS_00053674 XLOC_031795 Coding Coding ATP6V1C1 14:63591020-63631447 j TSS39545 3537 1 TCONS_00053674_2 382 0.0610687022900763 13 0.912828377776678 2.30293058328314e-06 0.00132571814794091 0.00254303674208668 0.00270550743781745 0.000942247018084779 0.00166919242354842 0.000287252907284336 0.00318358507954233 0.00814662580023287 2.30140221506767e-05 0.000172876218363563 6.9088222359952e-09 6.77873269602548e-05 0.000373406922791056 1.44340089329784e-07 0.00294262216024501 2.94737945085534e-08 0.00263184268615562 6.92662022819699e-07 0.000481033141220097 1.52284288183937e-08 0.00137690612887319 0.000883775239641952 0.00180361371375824 0.000791376262747908 0.000816100417750994 3.7297464178882e-06 0.000311585843745401 0.000318485686143051 0.000171962519943413 NM_176676.1 ATP6V1C1 Bos taurus ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 (ATP6V1C1), mRNA. 0.0 3043 99.25 0.486005089058524 XM_005250974.1 ATP6V1C1 PREDICTED: Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 (ATP6V1C1), transcript variant X1, mRNA. 0.0 2699 83.78 0.718122702855527 TCONS_00053674_2 sp|P21282|VATC1_BOVIN VATC1_BOVIN V-type proton ATPase subunit C 1; 0.0 783 100.00 0.99738219895288 1 coding 0 0 0 0 -1.18597948823852 0.0134907348981972 0.0239582897208409 0.622648511697436 CTTCTGACTGCCAATTACCTGCCCAGTACTTAACCACAATCTCTCTAGAGAGAAGGAGTCTTAATTTTGGAAGATACATCTGGTAAACAACATGACTGAGTTCTGGCTTATATCGGCTCCTGGGGAGAAAACATGTCAGCAAACATGGGAGAAATTGCATGCGGCAACTACAAAAAACAATAACCTTGCAGTTTCTTCAAAGTTCAACATTCCTGACTTAAAGGTTGGCACACTTGATGTCCTGGTTGGTTTGTCAGATGAACTGGCTAAACTGGATGCATTTGTAGAAGGGGTGGTTAAGAAAGTGGCTCAATATATGGCTGACGTATTGGAGGACAGTAAAGATAAAGTTCAGGAGAACCTGTTGGCCAATGGAGTTGACTTGGTTACTTATATAACAAGGTTTCAGTGGGACATGGCTAAATATCCAATCAAGCAGTCCCTGAAAAATATTTCTGAAATAATTGCCAAGGGTGTCACTCAGATTGACAATGACCTGAAATCTCGAGCATCCGCATACAACAACCTGAAAGGGAATCTTCAGAATTTGGAACGAAAGAACGCAGGGAGTTTGCTAACTCGAAGTCTAGCAGAAATTGTGAAGAAGGATGACTTTGTTCTTGACTCAGAGTATCTCGTCACGTTACTGGTCGTAGTTCCCAAGTTAAACCACAACGACTGGATTAAGCAGTATGAGACACTAGCTGAAATGGTAGTTCCAAGGTCTAGCAATGTTCTCTCAGAGGACCAAGACAGTTACCTATGTAATGTCACCTTGTTTAGGAAGGCAGTTGATGACTTCAGACACAAAGCCAGGGAAAACAAATTCATCGTCCGTGACTTCCAGTATAATGAAGAGGAGATGAAAGCAGACAAAGAAGAAATGAACAGGCTTTCTACTGACAAGAAAAAGCAATTTGGACCACTGGTACGGTGGCTGAAAGTGAATTTCAGTGAGGCGTTTATTGCATGGATTCATGTGAAAGCTCTGAGGGTTTTTGTTGAGTCTGTTTTGAGGTATGGCTTGCCAGTGAACTTCCAAGCAATGCTCCTTCAACCCAATAAGAAAACAATGAAGAAACTGAGAGAAGTATTATATGAATTGTATAAACATCTAGACAGCAGTGCAGCAGCTATTATTGATGCTCCTATGGATATTCCAGGCTTAAACCTGAGTCAACAGGAATACTACCCCTATGTGTACTACAAGATCGATTGCAACTTGCTGGAATTCAAGTAAAATGAGCCCTCCAGACAGCCCTGTCCTCGTGTCGTGTCGGTGTTTGCTAACAGACATAGGCTGCCGTGGGGCTGCACTTGTAACTCTCTTTCACCCCTTGCTTGCTTCTCACCTCCTCTCCTAGGCGCCTTCTCTCCTAGAGGTCCATTTCGCAACATTTTCTTTTAAAAGGAAACTACATGTCTTGTTTCTTTTTATTGATCAGGTCTGTAAATGTGTACTGAAAAAAAATCAGAGTTTATTTATGAACTGAATGGTTTATTTAAAAAGAAGGTCTTTCCTCATCCATATTGTGGTATGCATTAATTCCATTTGTTACTATTGTGACAAAAGCCTTGTTTACAAGGGAATGGTGTAAACAGTTATGCCATTTTGTTCACTGTATTTAGTAGACATAATTGTTTAATAGTTACTGAATCGTGATGTAAAGAAATGTGACAATATTCAGGTATGTGCTTTCTGAATGTTTCAAATTACAATCTCTGAGCACTGTTGACACCCACAGGAGAGAATAAAATTACCTGTGCAAAGGTGGGTTGTGGTGTGTGTAACTTCCAAGAGTACAGTTCAGTGAGAGCTTAATAAATGGTGTCATGGCTGACTCGCTGTGCCACTTCAGGATTGTGCTATATATACCAAGAGGTGACCATCGTGGCTGACGTGCATGATGATTCACGTGTGCCAAAGCTGGGTCAGAGCACCAATTGGAAGATTATTTTTGAACATGTGATGGGTATTTATATTTGCACACTAGACTTTGGGGTACCTCAAGTAGGAAGTAGGGTCAGTTTTGAATAAAGTTTAGTAGAACTCTGCTGCTTTAGTCGTCTGTTTTGTCTTAAGTCCTTATTTTATGTTTGTTTTTTAAGATTGTTAATTTTGCCCTCATCTTGACATCTATGTTATTTTTGATACAGTTTGAAAAGAGGCATGGCTAGCCTTATAGATCTCTGGAATAAGACAGGGTAATGTCCTGAGTGAGCTTTTGAAATCAGGTTTTGTGGCAGTGTTCCCTTTATCATGGCCTCACAGGCTTGTAAATGAAAGAGGTTTTTACATTTTAAGGGCATTTCTAAACTATCATATTCCACCTAGAAAATTAGCCTCCTAAATCCGTTTGGTTTCAAAATTGTATATTGTTAAGTCAGAAGTAATGGTTAACTTCAAACAAATCCAGACTTCTATAAAGTAAAACATGAGGCCACCCCTCCAGCCCCCTCAATTTCTTCTTTGCAAGGAAGTTTTTACATCGTTTTTCTGGTTTTCTCCTATATCTCTATAACATACATTGTCCACACAGTTTATTTTTAAATAAAAATAGGATCATACCACACATACTCTCACTCACTCTTTTGGTTACCTAGTGTTCGTTGTTGTTTGGTCACTCAGTCGTGTCCGACTCTTCAGAGCCTAAGATTTCTGACCGCTTGGCTCTTTCTCTTCCTCCCATGCCCCCAGTCTCTAGTAGGCGCTGAATGACTGAGGCAAGCACATTCCATAATCTCTTTTCAATATAGACAGTGATGTGGAAAAGGCATGGAGTGTGGGTCATCAGATAATGAGCTGTGTTACTCTTTGGCCCAGACATTTGGATGATGTGCCCAGGTGTTCCGTGCTAGTTATTCGGCCTGGAAGATTTTCCTACTTGCTGGAGTCGCCCTTAAGCAGACACTGTGTGTTCTGGGTGGAGCTTTCTGAATGAGCATGTATCAAGTAGTACCTTTAAAGTAATATTGTGTATGTAACATACTCAGCAGATGTGAACTGTTCTTTGCTCTCACTTTAAATAGCCCCAAATGTTGGAAATTAACATGTACACAAGGTTAAAATGGCTTCCCGGGTGGCGCTAGGGGTACAGAACCCATCTGCCAACGCAGGAGATACTGACTCGGATTCTGTCCCTGGGTTAGGAAGATCTGGAGGAGGGCATGGCAGCCCACTCCAGTGTTCACGCCTGGAGAATCCCATGCACAGAGGAGCCTGGCGGGCTGCGGTCTATAGGGTCGCAAAGCACTGGACACAACTGAAACGACTTAGCACGCACACACAAGGTTAAACGTGGTATACACAAATACTGTGGAACAGCTTATAGTGAAAACCGTGCTGGCCTTTAGAAGAAATGTGGTTATTGTTTCCTGTTAACATTAGTAAAGGATGGTTTGTCCTAGAAAGTCTGTAACAGTATTCCAGAGGAAATTTGTTGAAAACTGCTCTAATTCAGTTCTTGTCTCTAAATTGAAGTTTACCCATTTCAGTATTGTAAAGTTTTTTATGGTCTTTATTTTGCTAGCATGGAT EMBV3_17234 GCCCTATCAGAACCAAGGGTGGGTGTTCAAGATAAGACAGGCATCAAGGAAGAGTCTAGG Gene GeneID:510276|RASSF1:NM_001075442:133_cdna Constitutive 0 NULL GeneID:510276 22 GENE RASSF1 MGC139012 Ras association (RalGDS/AF-6) domain family member 1 EMBV3_02983 TGCTGGTGACAACCGGCACCTTTTCCAAAGGGAATTTGCCCAGCTTTGCTTGACAAGATG Gene GeneID:537922|TNFRSF21:NM_001076911:317_cdna Constitutive 0 NULL GeneID:537922 23 GENE TNFRSF21 MGC143129 tumor necrosis factor receptor superfamily, member 21 EMBV3_38168 TTACTGACCCCCTGGTCTATCCCACCAAGTTCACGGTGTCTGTGTCAGGAGTATGCATCA Gene GeneID:505001|LOC505001:XM_002690234:34_cdna Constitutive 0 NULL GeneID:505001 9 GENE LOC505001 NULL similar to trace amine associated receptor 8 EMBV3_01708 ATTGTCTGCAGCATTGCTATCACTCCCTGATGTTCTATGTTTGGGGCTCATGCTCTGGGC Gene GeneID:100139634|BOSTAUV1R416:XM_002695271:17_cdna Constitutive 0 NULL GeneID:100139634 18 GENE BOSTAUV1R416 NULL vomeronasal 1 receptor bosTauV1R416 EMBV3_03078 TGAGACAGGTGAACACCCCTCCATGCACTCTGCACCTTATCCACCTAGCTCTGGTGCTTT Gene GeneID:783525|ATPGD1:XM_002699396:409_cdna Constitutive 0 NULL GeneID:783525 29 GENE ATPGD1 NULL ATP-grasp domain containing 1 EMBV3_04561 ATTACAGCTCCTCTGGCACATCTGTTGACTGCATAGAGTTGGCTCCAGTTTGGATCAGGG Gene BVT0102_099756 + 0 NULL GK000007.2:15294692-15302188 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215600 TCONS_00215598 TCONS_00215599 1 XLOC_131015 Coding TCONS_00215599 XLOC_131015 Coding Coding ZNF699 7:15297563-15321046 j TSS160993 7040 1 TCONS_00215599_5 604 0.387926136363636 5 0.700408823779917 7.2241893204291e-07 0.00053544510370232 0.000657838163455816 0.000462826537738822 0.000845135567784905 6.23791969736295e-05 0.000464272984371738 0.000466099343582294 0.000820841360490196 0.000276233727409588 4.82341043837016e-06 3.33001504328389e-09 8.90685362153803e-05 0.000206414278315621 8.20035205562444e-07 0.000544857271174503 9.66440472277981e-09 2.67102921831642e-07 0.000392943392435419 0.000978710021520401 0.000178032978352863 0.00032101475916222 0.000403757662697535 6.50151854150588e-05 0.00057773118970027 0.000658123082881794 0.00030452027080991 6.43211316637131e-05 5.28049600062437e-08 6.05240576399017e-09 XM_608466.6 ZNF699 PREDICTED: Bos taurus zinc finger protein 699 (ZNF699), mRNA. 0.0 6217 98.68 0.4984375 XM_005259897.1 ZNF699 PREDICTED: Homo sapiens zinc finger protein 699 (ZNF699), 0.0 2300 83.50 0.304119318181818 TCONS_00215599_5 sp|Q32M78|ZN699_HUMAN ZN699_HUMAN Zinc finger protein 699; 0.0 1071 84.11 0.998344370860927 6 coding 1 0 1 1 -0.281372634726034 0.351881245900135 0.00323509617466148 0.9658586933685 GTCATCCAACGCCAAGTCCTCGGCTGACCCGGCTCCAAGACCCACTCGGGTCTCTCCCTGGAGGAAACTAACACTTCTCCGCTTGCCGCGGGAAGCTGCCACCGCCCTCCCCAATATCCCAGCTCCCGAGACCCCCCCGCCTTACGCTGTACGTGGCTCAGAAACCGGAAGCAGCAGCATGCTTCTGCGCGTGCGCGAGCGGGCGGCCTTGTCTTCTTGCATCTCTGTCTAAATCTGATAGAAATTTTCCCATCCAGTTCGACCCAGCCGGCCCCAAGTCTGGTGCTCGGGAGGTGGAGAACTCGGCCTTGGGATCTGTGGTCAAAAGGCTGCCGCTTGGGCTCCCCGCCGCTCCCGGGGTCTGTAGCAGCCGCGGCCGGTCCCAAACTTACTGAATCAGGAACTCTGTGAGAGTCCAGCAGTCGGGGTGAATCAGCTGCAGGCAAGAGTTGAGGAGCTATTCTCGTACTTAATCGGCCTCCAAAAGCATCCTCTGCTCTCTTTCCGGAAAGGAAAAGCATCCTTGCCATTCGGGTCACGGGGACTTGAGCCTCAACCTCGTCTCTGTGCCGGTCTGTGGATTTCGGTTTGTTCGGGAACATGGAGGAAGAGAGAACAGCTGCGGAGTTACAGAAAAATGTGATACAGGACACAGTGGTCTTCGAGGATGTGGCTGTGGACTTTACCCAAGAGGAGTGGGCTCTGCTGAATCTCGCTCAGAGAAACCTCTACAGAGATGTGATGCTGGAAAACTTCCGGAACCTGGCCTCATTAGGTTTCGAGATTCAACTTAAAATTAATGAATCAGTTGCTCCACAAGATGCTTATGGAAAAATATCCAATGAACAGGATGTAGCAGGATTCAAAAAGAGTGATTCCTCATTGTCCATTTTACATAAAATCTGGGAATACCATGATGTTGATTATCAGAACAAAAACCACAAGAGAAGTTTGAGAATTCATGGGATTGAGAACATCTATGAACATAATGAAGAAAATCAGTGTGGCCAAACCGTCAGCCAAATTTCACATCTTAATATACCCAAGAGAACTACTGAAGTAAGAGCCTATGAGTGCCATGTGTGTAAAAAGGCCTTCATAGATCATTTATCCCTGAAGAATCACATTAGGTCTCACACTGGTAGCAAACCCTATCAGTGTAAGGAATGTGGGAAAGCTTTCCATTTTTTTGCTTGTTTTAAAAAGCATATGAAAACTCCCACTGAAGAGAAACCCTACGAATGTCAGGAATGTACCAAAGCCTTCAGTTGTTCTTCCTTCTTTCGGGCACATATGAAGATTCATGCAGGAAAGACAAATTGCGAATGCAGGGAATGTGGGAAAACCTTTAGCTGTTCTTCATCCCTCACAGAACACAAAAGAATTCATAGTGGAGATAAGCCTTATGAATGTAAGGAGTGTGGGAAAGCCTTTAGCTGTTCCTCCTCACTCTCCAAACACAAAAGAATTCACAGTGGAGATAAGCCATATGAGTGTAAGGAGTGTGGGAAGGCCTTCAGTTCCTCCTCTCACCTTATCATACATATAAGAATCCATACTGGAGAAAAGCCTTATGAATGTCAAGAGTGTGGGAAAGCCTTCAGTGAGTCCTCGAAGCTCACTGTACACGTTAGAACACATACAGGCGAGAAACCCTATAAATGTAAGGAATGTGGGAAAGCCTACAACTGTCCATCCTCCTTGAGCATCCACATGAGAAAACACACAGGGGAAAAACCCTATGAATGCCTAGAATGTGGGAAAGCCTTCTATCTTCCCACTTCCCTGAATACACATGTGAAAAATCAGAGTAGAGAGAAACCCTATGAATGTAAAGAATGTGGAAAAGCCTTCAGTTGCCCTTCGTCCTTTCGAGCACACGTGAGAGATCACACTGGAAAGGCGCAGTATGAATGTAAGGAATGTGGGAAAGCCTTCAGTCGTTCCTCATCCCTCACTGAACACTTAAGAACTCATAGTGGAGAAAAGCCTTATGAATGTAAGGAATGTGGGAAAGCCTTCATCAGTTCATCCCACCTGACGGTACATATAAGAACTCACACTGGAGAGAAACCTTATGAATGTAAGAAATGTGGAAAAGCCTTCATTTACCCCTCAGCTCTTAGGATCCACATGAGAACACACACTGGGGAGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTTCGCCATTCTTCATACCTGACTGTCCATACAAGGATGCACACTGGAGAGAAACCCTTTGAATGTCTGGAATGTGGGAAAGCTTTCAGTTGTCCTTCATCCTTTCGAAGACATGTAAGAAGCCACACTGGTGAGAAGCCCTATGAATGTAAGGAATGTGGGAAAGCCTTTGTTTGTCCCGCTTACTTTCGAAGACATGTGAAAACTCACACTAGAGAAAATGTATAAAGTAAGGAATGAGGGAATGTCTTTAATGCTTTTTCAAAGCTTAGGGAGCGTGTGAGATCTCACACTGTGGAGACACCCTATTTTGGAAAAACCCGTAACCGAGAGAAACTCTGTGTATGTAAATCATGTGGTAATACCTCCATGACCATCACTTATTGTGTTGTAAGAAAGTTCATACTCAAAACAAAGATCAGTGCCTCATCCTTAAAGTGGGCTACTGCTGGCTCATTGGTTTCCAGTTTAATTTTCTGATATGAATGTTTAAGGTCATAAATTTCCTCTAATACATTTCAGCTCTAGCCCCATATGTTTTATTATGAGGTGCTTTTATTTTGGTTCAGGTGTAAATGTTATTTCTATTACAGAGTTTTCTTGACCCATCAGGCATTTAAAGTATATATTTTTTATATGTAGGCATGAGTGATCTTTTATTATTATTATTATTAGTTACTAACTAATTCTCTTTGTTCTCTAAGTGTGCAGTCATTGTGGTATTGACATTCTAGTATTTGTAGTTTCTTTGGTAAATGGTAATTTCATTTTGATCTAGTATGGTGGAAACTGGAAATTGCCTACCCACTATTCCCCCCAACCCCACCTCTCTTTTTTTTTTTTTTTACAAAAACATTATTAGTTTTTACCATTAAAAGCTTTCCCTGTCTAATAACTAATCCAGTGGAAATCAATAAGTGCAAAAGCCTTGATAGAAGAATCTCATCTGTTATGGTATTTTTGTATTTTGTTCTTTATCCTTGCTTATGACTGGGAATTGGACCCAATGTTTTGAATGTTTACAAAAGAGACCTTGCAACAGGAAAGCTACAAGTAAAGTTGGTTGGGCTGTCTTATGTTGTGGTACTTTGGACGTGGCTGGGACTGCATTTCCCAGAGTCAGTTCTTTATCTAGTTCCAGGTTTGAGTTGTCTAAAATAAGAGTTTGTGTGAAAATTGGAAGACAGAGGGAAGAAACCATTATTCTGAGTTTGTGGGGGCAATGAGACAGGGAGACAGATGCATGGGGGCCTGGCAAGCTTCAGTTTCCAGCTTTTCCCCTAATTATTGGGCTCGCTGATCAATACTGGCTCAAAGCAGAACACAAAATGCTTGACTTTCATTATCTCAGAGGCAGCCATTCCATAGACACCTCCATAAATTTCTCCATCATGGCCATACACAGCTTCTTGGATTTTTCTGGCAAGTTCTTGCATTGTAATTTTGCTGATATTACAGCTCCTCTGGCACATCTGTTGACTGCATAGAGTTGGCTCCAGTTTGGATCAGGGTTGTTGTCATCTACATGGTCCAAAGTGTGCTAATCTTAAGTGTACAGCTTGATGAAATTTTACACTACATACTGTGACAAACAGAACTTTCCCAGGATTTCAGAAAGTTCATTCATCTGCCTTCTCAATAACTGCTCTGGGGACTTTCCTGGTGGTCCAGTGGCTAAGAATCTGCCTGCCAGTGCAGGGGGCTGAGGTTTGATCCCTGGTCAGGGAACTAGATCTCACATGCCACAACTAAAGATCCTGCATACTGCAACTAAGACTTAGTGCAGCCAAAAAAAAAAAAAAAATAAAAATAAAATGTGTTGCTCCACAATTTTGGCTTTGATTATAATTTATTAAGTTTGCTTGTTCTTGATCTTCATGTAAATGTTAAGATACATTATGTACAGTTACATATTTGGCTTCTTTTTTCAATGTCTAATTTGCCTCTTAATTGCTATTTTGGCAGACTATGAACTTATGTCTCTTGTTACATGCTTTGAATATAAGAATGAAATTACTGAATCATAGGATAGACTTTATGTTTAGGTAGGTATTCCAGTTTTTCAAAAGCAATTCTACTTATAATCCTAAAAGCAATGAATGAAGGTCCTAACTGTTCCACATGCCTGATTAGCACTTTCTAATTTTAGCTGTTCAACACAGTATGTACTATTATCTTGTTTCTGGTTTTAATTTGCATTTATCTGATATGTAACAATGGTGAATACTTTTTTATATGCTTATTGATTATTTGGATATCTGTTTGTTTTTTTTTTGGCTGTGTGACTTGCAGGTTCTTAGTTCCCTGACCAGAGATTGAACCTGGGCCATGATAGTGAAAGCCTGGAATCCTAACCACTAGGCAACCAGGCAACTCCCTGGATATCTTCTTTCTGGGGGATACCTGTTAAAGCACTTCACCCATTTTTGGTTCCTTTTCTGTTTGAAAGGTTTCCTATGGTTGTGTGTGTGTGTGCTCAGTTGATCAGTCATGTCCAGTTCTTTGCAACCCCAGGGACTGTAACCTCTAGTCCCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGAGTAGCTGTTTCCTTCTCCAGGGGATCTTACTGACCAGAGATAAACCCCAGGTCTCCTACAATGCAGGTGAATTCTTTTCTATCTGAGCTACCAGGGAAGTCAGGTAAGCCCTGACTATAGTTAGATCTTGAGAATTCATCTTCTATCTGGCAGTTTGCATACTTTGATCAATATCTCCCCATTTTCTCCATCCCTAGTCCCTGGAGAAACTGGTTGCATGAAATCAAGATTAAATTGTGTAGAGTCCACAGAGATAAGAAAAGAGATCTATACCTGTGGCAGTGAATGTAGGAGCATGTGAGAATACATAGCTGAGATCTAAAAATATTATAGAAAATCGTAATTTTTATTGGCCCCATTTTAAAACTAAGAAACTGACATTTCAATAGGCTGGGTAGCAAAGTTTTTAGAAACAGGTATTAATAGTTTCAGCTACAATTCATACTTAGAGTTACAAGTTGATTCAAAAGAGGAAATATGGACTTCACTTTCATGAGAAGACTATAAAAGAATTTGGGAGCCATGTCTTAAAATTGCCACCTTTGTGCCTGATCAGTCACTCAGTCATGTCCAGCTCTTTGTGACCCCATGGACTGTAGCCCACCAAGCTCCTCTGTCCATGGGATTTCCCAGGCAAGAATACTGAAGTGGGTTGCCATTTCCTTCTCCAGGGGACCTTCTGAGCCAGGGGTTGAACCCACGTCTCCTGTGTCTCCTGCATTGGCAAGAGGATTCTTTTGCATTACACCACCTGGGAAGCCCTGCCTCTGGTTACTTATCCTTTTTAAATGTATGTATATGTCTCTGTCTAGTTACATACATATACATAAAACATCTGTTGTATATTATATATATGTAAATTATGTATACTATATATACCTGTATTGCAGGTATATACTATATATAAACTGTATTGCAGATAATTTTTCCCAGTCTCTGGCTTGTCTTCATTCTTTTCATTTTTGTAAACTATAAAGATAATTAAATAGTTTGACTACAGAAAAATCTTTGGGTATAACTAATTGCAGAGATGGCTGGATCCTGGAGCTAAAAAGATGTTATCTGGATGAATTCTGTCTCCATTCCTTGACTGTGCATCTTTCTGCATTAACTATTCTTCCTGGTGGGCTCTTTCTCTCCACAGTGGCCCTCAGAAGATCCAAGCTGCTTTCTTTCCAGGTTGATGTGTTAGGGAGAAGAGAGTGATTATCATTATGACCAATTCCAATATGCCTGTTACAGTTCAATCTGATTGGCTTACTTGCCAACTGTTATCAATTCATTGTGGCCAGAGAAATACGATTCTTTGGTTGGTTTAGGAGTGGCTTCTCACTGAATCTTGTTCAGTTGATAAGTCATGTCAGAATCTTTGTGACCCAATGGACTGAAGCACACCAGCCTTCCCTGTCCTTTACTATCTCCCGGAGTTTGCTCAAACTCATGTCCATTAAGTTGGTGATGCCGTCTAACCATCTCATTCTCTGTCACCCCCTTCTCCTGCCCTCAATCTTTCCCATCATCAGGGTGTTTTCCAATGAATTGGCTCTCTGCATCTGGTGGTCAAAGTATTGGAACTTCAGTTTCAGTAATGGTCCTTCCAATGAATATTCATGATGTATATGGTGAAGGGAGAAGGAACTTCAGTTTCAGTAATGGTCCTTCCAATGAATATTCATGATGTATATGGTGAAGGGAGAAGGCAGCAGGGGCAGATAGGGTATAGTAATAGATGTAATAATAACATTAGCCAACACAATATGCTTACTCTAATCTTAGCAGTGGGAGGGAACTATGAAGTCTGGGGATTCTCAGCCAGCCATAGTTCAAGAAATCTTTCAGAAAGGTTTGATTATGTTACCATCTCTTTTGATTGCCAAATATGATTTCTCAGTCTTTACATAATTTTGCAATATTTTTAGATACTTGGTAGCAAGAACCTTCCAACCTTTTTATTCATCAAGATTGTCTTGCCTTCTCTATTTCTCACTTGATTCTATATTAATTTTAGGATCTCCTTAGCAATTTTCACAAATCTTTTGGGACTGTGCTTGGAATTGCATTGACTTTATAGAACAACGTGAATAAAATTAACGTTTTACAACACTAAGTCTTCCAATTGATGAGCCTACTAAAATTGTTCATTTATCTAGGTCAGCTTTAATTCCTCTTAACAGTTTTTTTTTTTTTTTGTAGTTTCTATTATAGAGGTCTTGAATAACTTTATTTCTAGGCTTGTGGTATGTTTTCCTTTGTAAATATTTTAATTTAATTTTTGATTT EMBV3_18638 CACAGTGCTGTTTCCGACTGCTTGAAGCTCTATTTCCCAGGAATCCAGTTTAAGGGGCAG Gene GeneID:100300398|LOC100300398:XM_002686635:35_cdna Constitutive 0 NULL GeneID:100300398 4 GENE LOC100300398 NULL similar to ATP-binding cassette, sub-family A member 1 EMBV3_42899 ATGCAGGTGAACTGCGTGCAGAAGTGTAAGAAGCAGGCTGGAAGGGCCGTGCAGTACATG Gene GeneID:100299995|LOC100299995:XM_002691157:200_cdna Constitutive 0 NULL GeneID:100299995 11 GENE LOC100299995 NULL similar to hemoglobin, zeta EMBV3_18348 GTAATGTGCTGTGTTGGGTCAGGAGTTTTTGTAATGCTTTGTGTGTAAAAGGGGAAGTCC Gene BVV0102_073982 + 0 NULL GK000019.2:18064854-18123031 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09266 ACAGCTCTTCCAAGTCTTCGTCAGATAATTTCAACACCGCGGCTTCTCATCCTTGGCACC Gene BVV0102_172580 + 0 NULL GK000011.2:105682342-105698113 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026476 1 XLOC_015019 Coding TCONS_00026476 XLOC_015019 NonCoding Coding NELF 11:105673813-105685731 j TSS18969 614 1 TCONS_00026476_2 77 0.135179153094463 3 0.948728706889318 0 0 0 0 0 0 0 0 0 0 3.72831587097365e-06 0 0 0 3.01254343822687e-11 0 0 1.55597344013977e-11 0 0 0 0 0 0 0 0 0 0 0.000248592371757384 0 XM_868817.6 NSMF PREDICTED: Bos taurus NMDA receptor synaptonuclear signaling and neuronal migration factor (NSMF), transcript variant 1, mRNA. 7e-127 457 98.12 0.431596091205212 NM_001178064.1 NSMF Homo sapiens NMDA receptor synaptonuclear signaling and neuronal migration factor (NSMF), transcript variant 5, mRNA. 3e-61 239 86.27 0.328990228013029 0 noncoding 0 0 0 0 -0.134001209508299 0.475543877481583 0.0376035093918986 0.502149188620034 GGGCCTGGCAGTTCAGTCCGGTGCGGCGGGGCGCGTGGAGGGCCCCGGAGCTGCCATGCGGGTCCCGAGCCCGAACCCGAGCCCGAGCCTGATCCCAGTCCTCGGCGCGGCGCGGCACCCTCGACGGAGGCGGCGGGCGCGGGGCGCGCTCTGAGGCCTGGGGATGCGCCGCCGCCTCGATCATGGGCGCCGTCGCCTCCCGGAGGAGGGCGCTAAGAAGCGAGGCCATGTCTTCGGTGGCGGCCAAAGTGCGTGTCCCCCGCGCGCCTGATGCCCTGCTCTGGATGTGTGCCCCAGGGGACAGAGCCACAGCACATCTGCCTTGTTTAGAACCTTCCATCACCATCAGGATGAAACTCAGACCCACCATCTGCCCTGCTTCCAGAAAGGACACGCTGTACCAACAACTCCTTTAATAGGCCACAGACAAGACCTCAGTCTCATACAGGGTACTCGAAACATTACAGACCGGAAGAGCCATAGAGATCTTGACCAGCAGACACAGGCTGCCAGCAGGTGCCAAGGATGAGAAGCCGCGGTGTTGAAATTATCTGACGAAGACTTGGAAGAGCTGTTGTAAAGATGCTCAAATAATAAAACAGCCAGTTATTACC EMBV3_35204 TCTGCTTGTCGGCCTTGATATAGACGTTGAGGCTGTTGTAGTTGAACTCCAGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_38560 CTGGGAACTTGCTCATCATTGCCGCTTTCACAGCTTCCCTATTTCGGGCCCCCAGTACAT Gene GeneID:516498|PAQR6:NM_001046225:150_cdna Constitutive 1 NULL GeneID:516498 3 GENE PAQR6 MGC137682 progestin and adipoQ receptor family member VI EMBV3_27939 TGCTCTGGTTCCGCCGCCTCTATATGCTGTTCTCCCGCTACATGAGGATTAACTCTCTGA Gene GeneID:507080|PIGL:NM_001100311:475_cdna Constitutive 2 NULL GeneID:507080 19 GENE PIGL NULL phosphatidylinositol glycan anchor biosynthesis, class L EMBV3_21375 CCTGATTCTCTCCACCAAATGTATATCAAAAGTGCGCTGCCTTATTCCCTCAGGGTGTTT Gene BVT0102_015513 - 1 EMBV3_17842 GK000029.2:12549166-12555260 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163116 1 XLOC_099808 NonCoding TCONS_00163116 XLOC_099808 NonCoding NonCoding LOC522004 29:12548863-12553788 x TSS122315 1513 1 TCONS_00163116_2 62 0.415069398545935 3 0.693338748984565 0 6.64139053770096e-06 1.83489774179407e-05 0 3.58948802426494e-05 0 8.86511942068035e-05 3.90927136194151e-06 0 0 3.3286234737326e-05 0 0 0 0 0.000820450971247744 0 0.00142065729718764 0 9.50619237699145e-06 8.4270100223739e-05 5.50180240549476e-06 0.000115206213777538 3.92323943271109e-05 0 0 2.32351902352605e-05 0 3.20859698311767e-06 9.93430848882996e-05 XM_005216152.1 TRIM21 PREDICTED: Bos taurus tripartite motif containing 21 (TRIM21), 1e-72 279 88.99 0.141440846001322 0 noncoding 0 0 0 0 -0.0159355667833515 0.917614456699456 -0.0218636322632803 0.706186759821048 CTATTATTGAGGGTGCCCACCGCCAGCCTCTTTGATAATCGCTTGGTACAATTTCTCACACTAATTTTGTAAGGTGAAGAAACCAAGATTTGGCCAAGATCACATAGCTAGGTGATAGGGAGTTAGAACCCACTATGACTGACTCCAAATTAATCCCGTGTTTGTAGCCACATTATAATAATGGTAAAGACTTTCCTTTTTGCTCTGTTGTATGGATAAACACCCTGAGGGAATAAGGCAGCGCACTTTTGATATACATTTGGTGGAGAGAATCAGGAAAGAAAACAGACAAGCAGAAAAAGGAAAATCTCCCAAAATAAACTTGAATTAAAGATAAAAGCAGAAATTAATGAAACAAATAAAATTGATCATAATAGTAGCTGGTGTTTGAAAAGAACAAATAGCAAATCTGAGGAAGAAAAGGAAAGAAAACGGGAACAAGGGGAACATATTACAGATATGAGGGACTTTGAAAACAGAAGTGAATTATTTGTGTGTGCTCAGTCACTCAGTGTTGTCCAACTCTTTAGGACCCAGTGGACTATAGCCTGCCAGGCCCCTCTGCCCATGGAATTTTCCAGGCAAGATTACTGGAGTAGGGAACCATTTCCTTCTCCATGCAATCTTCCTGACCCAGATATTGAGTAATCATTGTAGTACTTTGTAAATTAGAAACTTGAATATACATTAGGGAAAGAATGGCTAGATAAATTATGTTATATTCATATAATGAAATATTACATGAGGAGAAATGCAGCTCTCCATGCATTAATCAAAATGAAAATAGTTGTAAGACAGTAAATGAAAAAGAAGGCAAAACAATACATATGTGATCTCATCTAATTTCTAAAAATTAGTTTGTAGAATTTTCCAAAGTTTGGTAAAGATCTAAATTGTTAACTCAGTGGCTACTTTAGAGAATAAGATATGAAAAGAAACTATTTTTGTCTGGTATCAATTTTTTATTTTTTAGATATTCCTAAGTAAAATTAGGGCTTCCCTGGTGGCTCAGAGGTTAAAGTGTCTGCCTGGAATGCAGGAGACCCGAGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGATATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGAGGGAGGAGCCTGGTAGGCTACAGTCCATGGGTTCACAGAGTCCAACACGACTGAGTGACTTCACTTTCACTTTCAAGTAAAATTAGGAAGCACAGGAAAACATGCACTCTTACATAAAGCAAACTTTTAAGAAGTATATGAGCCAAGAATGATTAAGAGGCTAAGAGGACGCTGATTTTAGCAAGGAGTCATTGATAATATTCAGGAGAGCAATTTTAATGAAATAGGCCAGCTGTATAAAAGCACAGGATTTCAAGCCAAAAAAGTAGGTGCTGCTGATTTCTAGATCAGTTGTCAGATCTGGCTATTTACTAGAATTAACCATACGGCTTTTTAATGGGGATGTAATCGACATAGAACGTTGGTTTTGGTGTAACTGGAGC TCONS_00164527 r 5' 0 TCONS_00164527 r 5' 0 EMBV3_29649 AATTGCTCTGTTGGTAATCTTCTGCCCAGTATTGTTTCTGATAGTCACCACCCCGTGGTC Gene GeneID:281496|SOD2:NM_201527:5_cdna Constitutive 0 NULL GeneID:281496 9 GENE SOD2 MGC128371 superoxide dismutase 2, mitochondrial EMBV3_25455 TTACCTCACATTTGGACAAGCAGAAATCCAGCACTGGGCCAAAGAAAGGACTCTCACCCG Gene GeneID:515523|SLC17A2:NM_001038118:86_cdna Constitutive 0 NULL GeneID:515523 23 GENE SLC17A2 MGC134070 SLC34A1 solute carrier family 17 (sodium phosphate), member 2 EMBV3_37430 CAGCGAAGTCAGTGTAATTTTATGAAACCTTAAGGGCCACATTTCCTGTACCACTGTCTG Gene GeneID:444860|ST3GAL6:NM_001002883:69_cdna UTR3_Alt 2 NULL GeneID:444860 1 GENE ST3GAL6 SIAT10 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 EMBV3_37552 CTCCTTCAAGCAAAGGAGGATTTCTCTGGCTACGACTTTGAAAACAGGTTGCATGTCCGC Gene GeneID:532895|TTC39C:XR_084058:51_cdna Constitutive 0 NULL GeneID:532895 24 PSEUDO TTC39C NULL similar to TPR repeat-containing protein C18orf17 EMBV3_33172 ACAAAGACGGCGGGGTGCTGTTTCACGTTAACAAGAGCGGCTTCCCCATCGACAGCCACA Gene GeneID:539085|VASH2:NM_001079611:93_cdna Constitutive 0 NULL GeneID:539085 16 GENE VASH2 NULL vasohibin 2 EMBV3_29629 TTGCAAGTCTGTGATCAAAACAGGGCGACTGCTAGTAAGTCATGAGGCTCCTTTGACGGG Gene GeneID:282150|BCKDHB:NM_174507:2_cdna Constitutive 0 NULL GeneID:282150 9 GENE BCKDHB MGC140675 branched chain keto acid dehydrogenase E1, beta polypeptide EMBV3_27692 ACCGCTATGCAGCCATATGCAGCCCCTTACTTTACCCAGTGGTGATGTCCAACAGACTCT Gene GeneID:100137810|LOC100137810:XM_002684682:52_cdna Constitutive 0 NULL GeneID:100137810 1 GENE LOC100137810 NULL similar to olfactory receptor Olr1533 EMBV3_27269 GCAGTCTTGCTTACAGGGGAGGGTTACTGTGTTTCCACCTAGTCTTCTCAGTGATTGGGA Gene GeneID:526059|ABCD3:NM_001105396:159_cdna UTR3_Alt 2 NULL GeneID:526059 3 GENE ABCD3 NULL ATP-binding cassette, sub-family D (ALD), member 3 EMBV3_23302 TGCCAGGTGGAAACAAGTAATGGGGGAGGGTGTTTAGCATTTAACTTAGCCTGGTGGACC Gene BVV0102_189464 + 0 NULL GK000002.2:91943226-91960474 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15770 GACATTCCAAAGGCTGGAGAGGATGGAGCGCTTTGAGGCCCACGGATTTCCAAGTTTACA Gene BVT0102_214595 + 0 NULL GK000005.2:5874026-6160013 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193891 1 XLOC_117617 Coding TCONS_00193891 XLOC_117617 Coding Coding OSBPL8 5:5820130-5986501 j TSS144811 6916 1 TCONS_00193891_4 847 23 0.958568251487648 6.93030453872588e-26 3.40289034676429e-24 4.08335614639521e-18 1.51971972828379e-16 4.44313990423182e-27 1.46786143730755e-19 4.39174238657141e-39 3.85913745318585e-16 4.08574676369986e-30 2.37263518961132e-19 1.09762151197653e-05 7.59724434485194e-05 1.40770436485728e-12 1.64300701450749e-13 9.2233370754206e-22 0.000462396816196676 3.05649096376088e-30 1.62587851145121e-13 8.92345517625744e-29 2.19119746526656e-15 1.58307094864154e-23 2.29989364877538e-05 1.28780400436101e-25 4.85182161695708e-23 0.000104902961020239 2.3369298576901e-14 6.26627367060951e-16 8.61164885098441e-10 5.75532002120243e-05 0.000182937303118081 XM_002687171.3 OSBPL8 PREDICTED: Bos taurus oxysterol binding protein-like 8 (OSBPL8), 0.0 1.245e+04 99.87 0.999855407750145 NM_001003712.1 OSBPL8 Homo sapiens oxysterol binding protein-like 8 (OSBPL8), transcript 0.0 5108 88.51 0.570561017929439 TCONS_00193891_4 sp|Q9BZF1|OSBL8_HUMAN OSBL8_HUMAN Oxysterol-binding protein-related protein 8; 0.0 1696 97.76 0.998819362455726 2 coding 0 1 1 1 -0.0579765211688557 0.699476258161667 -0.00766455675692732 0.908184784956312 CACCCTCCGGGCGGCGGCACCCCTGCCTCGCACGTTCTGCGCTCGGGCCGGCGGGGACTGCGGGCACCCCGCGCCGGGGAGGCTTCCTTTGGTCCCTGTGTCCCCTCTTGGAGTGGGACATTCCAAAGGCTGGAGAGGATGGAGTGCTTTGAGGCCCACGGATTTCCAAGTTTACAGGATGGCTAAACATTAATGGGAAGAGAAGTGTAAGCCTATCTTCTTTCACTATGGAGGCAAGTTTGGCAGATGGAGAACCTGACCGAATTTTGCAAACAGTGACGATACTCAACACCTGACACCAGGAAGGATGAGTCAGCGCCAAGGGAAAGAGGCTTTTCCAACGCCAACCAAAGATTTGTATCAGCCATCTTTCAGTCCAGCAAGTCCTCATACCCCGGGTTTTGAAAGAGGAAAGGAAGACATTTCTCAAAATAAGGATGAATCTTCACTTTCTATGTCAAAGAGCAAGTCTGAATCTAAACTTTATAATGGCTCAGAGAAAGACAGTTCAGCTTCAAGCAAGCTTACAAAAAAGGAATCTCTCAAGGTACAAAAGAAAAATTACCGAGAAGAAAAGAAAAGAGCCACAAAGGAGTTACTCAGTACAATCACAGATCCTTCTGTTATTGTTATGGCTGATTGGCTGAAGATTCGTGGCACCCTAAAGAGCTGGACCAAACTGTGGTGTGTGTTGAAACCTGGTGTGCTACTGATCTATAAAACCCAGAAAAACGGTCAGTGGGTAGGAACAGTCCTTCTGAATGCCTGTGAGATCATTGAACGTCCATCAAAAAAGGATGGCTTTTGTTTTAAACTTTTCCATCCTTTGGAGCAGTCTATTTGGGCAGTGAAGGGTCCAAAAGGTGAAGCAGTTGGATCCATAACTCAGCCCTTACCTAGCAGTTATTTGATCATCCGAGCCACTTCAGAGTCAGACGGAAGGTGCTGGATGGATGCTTTGGAGTTGGCTTTGAAATGTTCTAGTCTTCTTAAACGTACGATGATCAGGGAAGGAAAAGAACATGACCTGAGCATCTCATCAGAGAGCACGCATGTGACTTTGTATGGCTTATTACGTGCTAACAATCTCCACAGTGGTGACAATTTCCAGTTAAATGATAGTGAAATTGAACGACAGCATTTTAAGGACCAAGATATGTATTCTGATAAATCTGATAAAGAAAATGATCAAGAGCATGATGAGTCTGACAATGAGGTGTTGGGGAAAAGTGAAGAAAGTGACACAGACACATCAGAAAGGCAGGATGACTCATACATTGAGCCTGAGCCTGTTGAGCCTTTAAAGGAGACTACCTACACTGAGCAGAGCCATGAAGAACTCGGAGAGGCAGGGGAAGCATCGCAAACAGAAACTGTGTCTGAAGAAAATAAAAGCCTTATCTGGACTTTGCTGAAACAAGTTCGTCCTGGCATGGATCTATCCAGGGTGGTCCTGCCTACATTTATTTTGGAACCCCGTTCTTTCCTGGATAAACTTTCAGATTACTACTATCATGCAGATTTCCTGTCTGAGGCTGCTCTTGAAGAAAATCCTTATTTCCGTTTGAAGAAAGTAGTGAAATGGTATTTGTCAGGATTCTATAAAAAGCCAAAGGGACTGAAGAAACCTTATAATCCTATACTTGGTGAGACTTTCCGTTGTTTGTGGATTCATCCCAGAACAAACAGCAAAACTTTTTATATTGCTGAACAGGTGTCTCATCATCCACCAATATCTGCCTTTTATGTCAGTAACCGAAAAGATGGATTTTGCCTTAGTGGTAGTATCCTGGCCAAGTCCAAGTTCTACGGAAACTCATTATCTGCAATATTAGAAGGAGAGGCACGGTTAACTTTCTTGAATAGAGGTGAAGATTATGTAATGACAATGCCATATGCTCATTGTAAAGGAATTCTTTATGGCACAATGACACTGGAGCTTGGTGGAACAGTCAATATTACATGTCAAAAAACTGGATACAGTGCAATACTTGAATTCAAACTAAAGCCATTTCTAGGTAGTAGTGACTGTGTTAATCAAATATCAGGTAAACTAAAATTGGGAAAAGAAGTACTAGCTACTTTGGAAGGACATTGGGATAGTGAAGTTTTTATTACTGACAAAAAGACTGATAATTCAGAGGTTTTCTGGAATCCAACACCAGACATTAAGCAGTGGAGATTAATAAGGCACACTGTAAAATTTGAAGAGCAGGGAGATTTTGAATCAGAGAAACTCTGGCAGCGGGTAACTCGAGCCATAAATGCCAAAGACCAAACAGAAGCTACTCAAGAAAAGTATGTTTTAGAAGAAGCTCAAAGACAAGCTGCCAGAGAGCGGAAAACAAAAAATGAAGAGTGGACTTGCAAGTTATTTGAACTTGACTCACTTACAGGAGAATGGCATTACAAGTTTGCAGATACTCGACCATGGGACCCACTTAATGATATGATACAATACGAAAAAGATGGTGTTATCCAGACCAAAGTGAAACATCGCACTCCAATGGTTAGTGTCCCAAAAATGAAGCATAAGCCTACCAGGCAACAGAAGAAGGTGGCAAAAGGCTATTCCTCCCCAGAACCTGACATCCAGGACTCGTCTGGAAGTGAAGCTCAATCAGTAAAACCAAGTGCAAGAAGAAAGAAAGGGATAGAACTGGGAGACATTCAAACTTCAATTGAATCTATTAAACAAACACAGGAAGAAATTAAAAGAAATATTATGGCTCTTCGAAATCATTTAATTTCAAGCACACCTGCCACGGATTATTTTCTTCAACAAAAAGACTACATCATCATTTTTCTCCTGATTTTGCTTCAAGTCATAATAAACTTCATGTTTAAGTAGAAGTCCTTTACAATTGAGTTAATGAACTGGAATGATCAGATTTGGCCTGGGACCAATGTTGAAGTTGGTTTGGTCTTTATTAAAACATCACAATATTTATAAAACTGAAAACCTTAGAAATAAATGTAGAAGTGTTGATTTTTCATACCTTTTATCCTTAACCTGAAACAAGAGCTATTCTATTTGATTATTAAAGTGAACTATGTGTTAAGTGCCAGAATGTTTCTAGCTTTTGTCAGAATGTGTCTACATGTGAGTATAATAAATCCACATGTATACACAATTGTGTCTTATATATACCTTAACAGTAATCTTTGTAGTCTATGGTATGTTCATGTAATGAAATATATAGCATTAATGTCAGTCATAACAAAAATACTATCGATCTTATATATGTAACAATCTATTTTCTTCATAAAACAGGCACAAAACTTTTATCAGTAAGGAGTTACAGAATGGGAAATAATGGGATACTAGGCATAAATAGTTCAACACACTGTACTGTTAAAAAAAGATCATTTCCAAAGCATTCAGCTCGACTGTCTTCTTACAGAAAACAAACAAAATGTGTGGTCAAATTGAGACAAAGTGGCAAATTGCTTTTTTCAAAAGTTTACACAAGATTTTTTTAATCCCTAGAATTTAATATTTATAGATACAAGTATAAATATGTGTATATCAACAGCAGAAAACTGGTATGCAGCTACTTGGATCTATTGATTCTATCTTTCTTATCGTACGTATATAATACCCACTTAAGCACTTGCTGGAAAAAAGTGTGGTCAAACTTGATTGCTGTCCTTTTTTATTTTTTTAAACTCAGTTGGTCCAATAACATAGGCTAAATTCTAGAGATGTTTGTAGGGCATATAAAATGCTGATAATCGTGATTTTTCATTATGAAAACCTTTCTTTAGCTTTCATTTAGATTCTGGTGTGTTCAGTGAAACAGTAGAATAGAAAATATATATACATATATCTCCCATATTTTACTTCAAAAGCCAAATAAGAGAAGAGTGATAAGAAAAGACACTTAGTGTGGTGGTAATTATGCATTTTAAAATTGGTTTCTTTAAAATGTGCAATATGTTGAGCATCTAAGAAGAGCATCAAGTTCCGAAGTTTAATTCTCTGTTCTCTGCTTTCAGTAACTGCAGTCTGTGGCAAAACCACAGTTCCTCAAGGTTCCTTTTGTTCAGGCTCAGGCAAACATTTTCCCTAAATTTTTTATCAGTTTAATATTTTTACTTTATGTATCTTAGAATTCCAAAAGTAGATTTTGAAATGAAAATGAAGGTCAGAGAGGAAATAATTGCTCTGGCTACATTTGCCCTTGACTAAGAAGAGACTGTGAGATACTAGTGAAGTTATAGTCAATGTTTATGCCATGCTAAGCATACAATAAAGGAAAGATTACTAAATTATTAAAAACTGAAAATGATAAGAAGAGCCTGCTTTGTTCCTCCTAATCAATACAGTGATCTTTAGTCTCCTTAGGTTTTATGAGGAGCCATTTCTCATGTATTTTTGGCAAAACAATAATTGTGAAAATGTTTTTTAAATAGATTATACGTAAATAAGATATACCTATACCCAATATAAGCATAGGTATGACTACACTAAACAGGTGGGTTTTTTGTTTGTACTTCATACTTGTTGATATCATTTTTGTACTCACTCTCTGTTACCAATATTATGCTCAACTGCCTATTCATTAATATATATTTTGTAAATATTGTACAACTCGATCCTTTTTTATGGCTTAAATTAGAATTAATTTATATAAGTTGATTGGCTGATCACAATAATAATTTCATCTTTAAACCCTGAAAACTTAATGTTTCTTTGTTGGTAAACTCCCTTTTGGGGCTTTAGGCTTATCTACTTGTATGCTACTTTCATTTGGTCTTAGTGTTTTATTTGTATGGTTATCCTCTAAGACTAGAGAGGGAGTTGTTTTCTTTATTTTTAAAACTTTTCTTGTTAGGGCAAATGTTATGGGTTCTTATTATCCCAGGAGTCAAAAACTATTTCATGAGAAAGAGCAGGGTTACTCATGCTGTTTCTTATACACTAAAAGCATATGTCTAATCTAATAGTCTTACGCTTTTAGTTATATGAGTTCCTTTCTGTGAACTGAATACAAAACTCAGGAATTGGTGGCTTAGTTTTAGATCAGTTCTTATACTAGGCTTAGTATGTGAATGCTTTAAAATACATAATGAACTTTGTATTTAGCCATGTATGTAATTGACTTTGAATGTTCTCTACCTGAGATTAATCTTCCTTCACACATGGACTCATAAAAATTATGATTTACAGTTCCCAGTTATCTGAGAGTCTCATGATGGTTTCTAGGATTTAAGACCTATAACCAGTTTTTTTTTCTTTTTTTCATTTAATCAAAAATTTTATTTTTTCACTGAAAAATTTAAATACGTAATAGTTATTGACATGTGCATTTTTGTTTTAGTTATTAAATATACTATGCCTTCAGTTATCCACCATTTAGTGAGAGGTAGCTGGCCCAAGAAAAGACAATAAATTAGGGTGTGTGATATAAGTAAGTTTCAGCAGTAGATACTTCATTTGTATTTCATATCACTACTTTTTTTGTATTACTTATAAAGGTACAGTGTAATTTTTGTTACCATTCCATTGAAAAAGTTGGCCTTGTAAAATACAACTCTCATTTAGTATTCATGCTTTTGTGCCTTTAAGAAAATAATTTTTTTGTCATTTTTGTGTTACAGAACTGTAATATGATTCAAAGTGTTTATAGGCTTAATTGTCATAAAAGGGTCATTTCTCTGTGTCACTTTATTTCCTTTTATATAGCTATAGTATGTTTAAACAGTAATGCCATACTTTTATAAGAGTTTGTCCATTTACCTATCTCAAATATATTCTTCACTTTCAGACATCACTGAACTAGACTTGTCCGATTATTCTGAGTATTGTTAAACAGTGCCTTTTCGATGGAATTCACACTGTTTTAGGATGTCAACTTGTGCCATATGTATACAAAATTATGTGGAGAAGGCAGTTTTAACTTTTTGAAGAATATCTTGGTGAAATATTTAAGAAAACAAATGTGTAAAATTCCATTTTTTCCAGTGTTTCACATTTCCAGTGAACAGTGAATATATTTGGGGGTTTTTGTTTGACATACAGTGATAATGACATTTGATGAGCCATGCATGATGCTGCAGATGATTTTGAATTATGTTAAATGCACAGAAATATTAAAATCAGCATTTATACCAAATTTTCCAATTTGAACCATAGCTGAGAGGGGAGGAATCCCACACAGATCACTAAGTTTACATTTGAACTTCTATCTTATTTGACTACGTGGAAAAAGATTCTTTAACCTGTACCCTGCCACTATTATGTAATTTGGTTTTATTTTGTGTACCTATAGTGTGAATTTAGTATATTAAATTTACTTTTTGTCACTCTTAACATGCTGTTTGTTTTGTTACAGTTTTAATTGAAGATGGACTGTTAAAATTGAATAGGACCAGTGTCTCCTTAATATGATTAACATATTTAGAAGAGCCACAAGAAACCCATGACAAAATGAATGTGAATATACTTTATAAAATATTTAGAAAATTTTCTTTCTGAATTTATCATGAAAAATTATTTGAGAATTACAATATTAAATTTAAAGAAAAAATGCCATGAAACATTTGAACTGATGAGCCACACAACTTCAGTTGAAATTTTTTACTTTTTAGCATGTTAACTATACATCTAAGTTAAATATCCTGTTTAATGATCATTTATAAATTCAAACACTGGTCAGTTTTGTAAAACAGAATAAAAGTATGTTATTTGCAGTGTAAGTACAGCACACTGTCAAGTTATTTTCCTTAAGGTGCATAGTAAATGTACAGATAGTCATAGGCAACTGTTTTGTAATGTATTACATTTCTAATCTGTTACTCCTAACCTACTATAAATGTTTGCAGAGACAAAAGAATTGAATTTTTCTAATGATCTGTAAAATGATGCTAACTTCAACTAGGCATTCTAAATAAAGTTTTTAAAAAGAGCAAA EMBV3_13985 TTCCTCTCTTGGGGCTCTCAGGACCTCACACTGCTGACTCCAGGACTACTCGGAACACTT Gene BVT0102_144107 + 0 NULL GK000014.2:2842656-2854603 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052640 1 XLOC_031533 Coding TCONS_00052640 XLOC_031533 NonCoding Coding LOC100298702 14:2853181-2856222 j TSS39013 1842 1 TCONS_00052640_6 99 3 0.395065789473684 0.000267733164009687 2.72759761559119e-05 0.000523464641905603 6.31151731149675e-05 0.000335041264979716 1.94194183667302e-06 9.49789556179273e-06 0 0 1.56359936819054e-05 0 0 3.07865992778961e-05 0 1.36870361540801e-10 0.000172062304341527 0 0 0 1.54927037214773e-11 0 0 0 0 8.27504607702752e-05 9.27748183829486e-05 5.07915530821693e-05 0.000177293751285351 0 0 XM_003583023.2 PSCA PREDICTED: Bos taurus prostate stem cell antigen (PSCA), mRNA. 0.0 3315 99.95 0.999457111834962 NM_005672.4 PSCA Homo sapiens prostate stem cell antigen (PSCA), transcript variant 5e-90 336 69.68 0.451682953311618 0 noncoding 0 0 0 0 -0.0347082541512762 0.833671250271222 0.0173785916132697 0.718527391715226 CCTGCCAGCAGAGCCCTTAAAGCCGCCCAGGCTCTGCTCACCTGAGCCCACCACCATGAAGGCTCTCATCCTCCCCCTGCTTGCTGCTAACTTGGCCTTGCAGCCGGGCACCGCCCTCCAGTGTTACTCCTGCGAGGACCAGGGCAACAACGAGGGCTGCCAGCGTGTGCAGAACTGCAGAACCAGTGCTGGACCGAGCGTGTCGAAGGCATCAGTCTCCTGACCGTCATCAGCAAAGGCTGCAGCTCGCACTGTGTGGAGGACTCGGGGAATTCCTTCGGGAGCAAGAAAAATATCGCCTGCTGCTCCACTGACCTGTGCAACGCCAGCAGGGCCCAGGCCCTGCAGCCGGCCGGCGTCACCCAGGTGCTGCTCGGTGCTCCTGGCCATCTGCTGCTCTGGGGCCGGGCCCAGCTGTAGGATCCAGGAGGACCCTGCTGTGCCCCATGCCAGGCAGCGGTATCCATGGCCTGGGCCACTCCTGACACACCTGGCCCCGTCACAGACCCTCCGAGACCCTCACTCAGGTCGGGCGATGCCCCCCGCCCTTCCCAGCGCTCCGTGGCTCCCTCGAGGACTCCTGCCCAGCTCCCACCGCCCAGCAGGCTGGGCTTCATGATGTGAAACAGCCGGCAGATAGCCCACCAGACCCCTGCTCAATATTCCAACCCACCCTTAACCCTTGCTCAAGCACGTCTTCCTCCAGGAAGCCTTCCCTGCCTGCCCCTCCATAAGCTGAGCCAGGTTCTGCGTGCAGTGTCCTCCACACCCAGCACGGAGCAGGCTCTCTGGAGGGCCCTGCAAAGGCTGAGAGGAAGTGTTCCGAGTAGTCCTGGAGTCAGCAGTGTGAGGTCCTGAGAGCCCCAAGAGAGGAAGCTCAGAGGGGCGGGCTTGTTCATGGGGGTCGGGGGGCAGCAACACCATACACACAGTAGGCCCTTAACAAAGGCCTGTGGGCTTGGCGGCAGAGAGCCTCTGTCCTTGCTTGCCCCCAGGCGGAGGTCAGGGTCAGGGTCCGGGGTTGTGCGGGTGTAAACATGGAAATGTGGAGCACGTTTAGAGCTCTAGGAAAGAAAGAAAGCCAAGGACGAGGATCCCCAGCGCTGGCGCCTGGAAGGCCTCTGCAGGACCCAAGGTCCAGAGGGAAGTACTGAGGTGCTGAGAGCAGCCACGTCCACCGAGCAGGGCTCCAGGCCATGGTGTTCACATGTCAGCCCCTCCCCGTGGGGGGTGCTCCGCCCTGGGCCGAGGCTCAGGAGGGGAGGTGCTCCGGGTCCCCACACCCCACTCTGGACTCCACGGGCGAGCGTGAGAGGGAAGAGGCGGATGGCCCCCGGAGGTGGGAGCCCTGGCTGCGCCCTCCATGCCCTGTGACCCACGTCCTGCCCCACCTCCTGCCGTCCCTGAGGCCTCGCAGCCATAAGCCTCCACAACAGCTCGGCTCCCGGCCCAGCTCCCCGGGCAGAGGTCTCCCCTCCTGCAGGACGGGGCACTGACGGGCCCCCCCAAGGGTACGGACAGCACGGGGCCACCTGCAGGGGCAGCCCCCCCCCAGTCCCCACAGACAAAGAGGAAGTGCAAACCCCTGTCCCCAAGCTCTGGACGACACCTGCCCCCATCTCACCCTCATGGTGTTGCTTCTTGTACGGAACAAGGTATGTTCTGCGAGCTGACACACCTGGTCACACTCTCTAAGGGAAACCACTTTTGTTTCTGACCTCTGTCTCTCCTCGGTAAGGAATAGAAACCCTGTGGTGGCCGAAGTGGTCCTCCAGATGGACCGGCGTGTTTGTTTTTAAGATGACCCTTGCATCTTCCAGGGGGCAGATGCTATCTGATCCG EMBV3_20024 AAACACGCGGGAAACGAAGCCTCCAAAAAAGCGCTGCCTCCTAGCTCCACGTTGGGATTA Gene BVT0102_074081 + 0 NULL GK000030.2:99079061-99321372 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245289 TCONS_00245288 TCONS_00245290 TCONS_00245287 1 XLOC_150680 NonCoding TCONS_00245287 XLOC_150680 NonCoding NonCoding LOC100848900 X:99188219-99245604 = TSS184154 934 2 TCONS_00245287_1 68 0.104925053533191 3 0.983775965425903 0.00194730382063456 0.000687917023665054 0.000271530536039277 0.000451284943342108 0.000348879689392216 0.000287235423110227 9.29706028125635e-05 0.00089923639266536 1.34653193324883e-05 0.00399441474200461 0.00181891150409826 0.00203996069173871 0.00070378332358151 0.0019891784718119 0.000520555754938378 0.0142782712845207 0.00434110638342468 0.00898499380030182 0.000286298074104428 0 0 0.010526210099676 0.01379720602555 0.0139534785182355 0.000497007061818376 9.7014736907329e-06 0.000395208168891888 0.00316215065610381 0.00309867681977963 0.00733911783347007 XR_139742.2 LOC100848900 PREDICTED: Bos taurus uncharacterized LOC100848900 (LOC100848900), 0.0 1676 100.00 0.993576017130621 NR_015367.2 LOC550643 Homo sapiens uncharacterized LOC550643 (LOC550643), non-coding RNA. 0.0 731 83.38 0.728051391862955 0 noncoding 0 0 0 0 0.242757452871686 0.18238815052944 0.0273229015571596 0.562296677526791 TTCTAATCTTAGAATTGCATAGATAGTATAAGACTATCTACAGATTTAGTTACACTGGGGGCGGGGGAGACATTCTATTAAATAAACGCTTCTTTTTTTTTTAAGACCCATCCTCGCAGAAACGTTAAAATAGGGTGGGGTAGGGAGCGAGGGCGGAGGCAGAGAGGGGATATACGTCTCAGGATACAGGAAATACGGAAAAAGCGAAACCCAGAGGAAGCTCTGTGCCTGGAAGGGACCCGCCGCCATCTCAGGTCTCTTGGCCTCGCCAGGGCCCACTGGAGAGAGCTGACACCCAGGTCCTATAATCCTTATGGGGGACCAACCTTGTACCTCCGGGAGATCCACGCTCCCACCTGGAAACACGCGGGAAACGAAGCCTCCAAAAAAGCGCTGCCTCCTAGCTCCACGTTGGGATTATCCTGAAGGAACGGCTAACGGAGGTAACACCACTCTCCCTTCCACACCTCCTCCAGCATCACCGGGCCTGAAGTCGCATCCACCTCCTCCGGAGAAGTAGTACAATATACTTCTTCCACTCTAAACCAGTCTATGAGGGATTGCAGTATGACTCCATTTCCTTGGTGTATTCATAAAATAGTTCACTCAGTGAAGACAATGAAGATTACTGACATTGCCACCCTGCTTTTTCTGATGTCCTGCACCAGGAAGTTGTGATTTTTAAGTCTTATGATATAATCATCAAAATTTCACCTCCTGTATTTGGATGGATTCTGGGACATGACCAGTAGATCTCTAAATTTGAAGACCCCAGCCTGGATTGTGGTGACCTCACCAAAGCAAATAATGCCTGTGAGGTGGTCCTGCAGCAGCCAGTCAATGCTCTCTTTTGGTGACACTCAGTCTTTGCTGTATAACTTTGAATTCTTATAAATCCATTAAGTTTCCAATAAAGTTTTTCTCTCATTTGCTG EMBV3_31340 GAGGGAACCAGTTGGAGATGACCCCACCTTCTGCCCCGCCTCACACATTCCTGCAGGTAT Gene BVT0101_046704 + 1 EMBV3_10399 GK000007.2:12977639-12981641 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36435 TACTGCGACACATACCTCACCCATGATTCTCTGCTGCATTTCAACAAGGAAAGATACCTC Variant GeneID:614553|SNRPC:NM_001076334:158_cdna 108^216 3 EMBV3_09506 GeneID:614553 23 GENE SNRPC MGC134384 small nuclear ribonucleoprotein polypeptide C EMBV3_03236 GCGCGGCCAGGAGCGAGGATGCAGTGTCTGTGGTGACCCAGGATGTAAGAGGGCTGCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41837 TTCAGGCCACACCCCTAAAGAAGCCGCTGGAACTACCGCTCAGGAATCAACTTCTCCATA Gene BVT0102_018373 + 0 NULL GK000026.2:34917821-34935713 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152213 TCONS_00152214 TCONS_00152221 TCONS_00152217 TCONS_00152220 TCONS_00152216 TCONS_00152219 TCONS_00152212 1 XLOC_092282 Coding TCONS_00152219 XLOC_092282 Coding Coding LOC535781 26:34885714-34927149 j TSS113575 2662 1 TCONS_00152219_6 803 0.0112697220135237 16 0.936139402423131 0.0165950514206734 0.0191686103299555 0.010290265451032 0.0105416335256592 0.0119363599450649 0.00579531841507941 0.00963049805269291 0.0134826237026097 0.0197746987208021 0.00426313935962268 0.00171550145029578 2.51864310898647e-08 0.00181104123643825 0.00673339414653976 0.00714806309876381 0.0132357356219337 0.00151414824930107 0.0228515589626944 0.00881508005414816 0.00982756866143531 6.53439900634936e-07 0.00919060341931844 0.00652427618553422 0.00610167766186002 0.0136729920638014 0.0129068189307026 0.012299141941846 0.000452826125917616 2.59831557350854e-06 0.00282618561053632 XM_003587895.2 C26H10orf118 PREDICTED: Bos taurus chromosome 26 open reading frame, human C10orf118 (C26H10orf118), mRNA. 0.0 4433 100.00 0.922990232907588 NM_018017.2 C10orf118 Homo sapiens chromosome 10 open reading frame 118 (C10orf118), 0.0 3611 90.38 0.994740796393689 TCONS_00152219_6 sp|Q7Z3E2|CJ118_HUMAN CJ118_HUMAN Uncharacterized protein C10orf118; 0.0 1367 89.76 0.99626400996264 1 coding 0 0 0 0 -0.217491871946916 0.134903345312475 -0.0109997780668682 0.856640659213259 GTTGATGTGTCAGCTCCGCGGGGGCTTGGGGCAGCCGCGGCTGAGGGAGCGTGCTTTTGGCTCTGTTCCCACCGCTCTCCCCACCGCCCCCGCACTTCCAGGTCTGCGGGGCCCCTCTATGGAGAAGTTGATTCCTGAGCGGTAGTTCCAGCGGCTTCTTTAGGGGTGTGGCCTGAAGCTCGGATCAGTGGGATGTAAGACGAAGATCAGGAGCAGATTTGAAGACGTACACAGTGAATCGGTGCCAGTCAGCATGTCGGAGACAGAGCACATAGCCTCCATTTCCTCTGATCAAAATATTGAGAAAACGTCGGAAACAAAGGAAGGCTCATGCAACTCTTCTTCTGGTGATGAAAGCAGCAGCTTAGAAAATGAGTCCAAACTGTTGTCATTAAACTTGGATAAAACTTTATGTCAGCCTAATGAACACAATAATCAAACTGAAACACAGGAAAATTATATTCCAGATCATGGTGGGGGTAAGGATTCCTGTGCTAAAACAGACACAGGCCCAGAAAGTTCTGAACAAATAGCTAGTTTTCCTGGTGGAGATTTTACAAAGCAAGTTTTGAAAACAAGTGAAGCAGAACAAACAGTCACACAAATATTGGCGGAATTAAGGTCATCTACATTTACAGCAGCAGGTAATCAAAAGACTTACTCAGAAAGTCCTTATGATACAGACTGCACCAAGAAACTTATTTCAAAAATAAAGAATGTTTCAACATCAGAGGATTTGTTGGAAGAAATAGAATCTGAGCTCTTATCTACTGAGTTTGCAAAAGAACACCGAGTACCAAATGGAATGAATAAGGGAGAAAATGCATTAATTATGTTTGAAAAGTGTGTGCAAGATAAGTATTTGCAGCAGGAACACACCATAAAAAAATCTCTTCAAGAAAATCAGAGATACCAGAAACTCATCTTAGACATTTGTTCAGAAAAAGACAATTTAAGAGAAGAACTTAAAAAAAGAACAGAAACAGAGAAGCAGCATATGAACACAATTAAACAGTTGGAAACAAGAATAGAGGAACTTAATAAAGAAGTTCAGGCTTCCAAAGATAAAGTATTAGCTCAAGACATTGCAGCCAAAAATGCAATTCAGCAATTACACAAAGAGATGGCCCATCGGATGGAACAGGCCAACAAGAAATGTGAAGAGGCACGCCAGGAAAAAGAAGCAATGGTAATGAAGTATGTAAGAGGTGAGAAGGAATCTTTAGACCTTCGAAAGGAAAAAGAGATGCTTGAAAAAAAACTTAGAGATGCAAATAAAGAATGTGAGAAAAACACTAACAAAATTAAGCAACTTTCTCAGGAGAAAGGACGATTACACCAGCTGTATGAAACAAAGGAAGGTGAAGCTACTAGACTCATCAGAGAAATAGACAAATTAAAGGAAGATATCAACTCTCACATCATTAAAGTAAAATGGGCACAAAACAAATTAAAAGCAGAAATGGATTCACATAAGGAAACCAAAGATAAACTCAAAGAAACAACAACAAAATTAACTCAAGCAAAGGAAGAAGCAGATCAGATTAGGAAAAATTGTCAAGATATGATAAAAACATATCAGGAGTCAGAAGAAATTAAATCAAATGAGCTTGATGCCAAGCTTAGAGTCACAAAAGGAGAACTTGAAAAACAAATGCAAGAAAAATCTGACCAGCTAGAAATGCATCATGCCAAAATAAAGGAACTAGAAGATCTGAAGAGGACATTTAAGGAGGGCATGGATGAGCTCAGGACACTGAGAACAAAGGTAAAATGTCTAGAAGACGAACGATTGAGGACAGAAGATGAATTATCAAAATATAAAGAGATTATTAATCGCCAAAAAGCTGAAATTCAGAATTTGTTGGACAAAGTGAAAATTGCAGATCAGATACAGGAGCAGCATCAAAGAGGTAAACAAGAAATTGAAAATTTGAAGGAAGAAGTGGAAAGTCTTAATTCTTTGATTAATGACCTACAAAAAGACATCGAAGGCAGTAGGAAAAGAGAATCTGAGCTACTACTGTTTACAGAAAAGCTCACTAGTAAGAATGCACAGCTTCAATCTGAATCCAATTCTTTGCAGTCACAGTTTGATAAACTTTCCTGTAGTGAAAGTCAGTTACAAAGCCAATGTGAACACATGAAACAGACAAATATGAATTTGGAAAGTAGATTGTTAAAAGAAGAAGAACTGCGAAAAGAGGAAGTCCAGGCTCTGCAAGCTGAACTCACTTGTAGACAAACTGAAGTTAAAGCATTGAGTACCCAGGTTGAAGAATTAAAAGATGAATTAGTGACTCAAAGACGTAAACATGCCTCTAGTGTCAAGGATCTTACCAAACAACTTCAGCAAGCACGAAGAAAGTTAGATCAGGTTGAGAATGGAAGCTGTGATAAAGAAGTCAGCAGCATGGGAAGTCGTTCTAGTTCATCAGGGTCCCTCAATGCTCGAAGCAGTGCAGAAGATCGATCTCCAGAAAATACTGGGTCGTCAGTAGCTGTAGATAACTTCCCAGAAGTAGACAAGGCCATGCTGATTGAGAGGATAGTAAGGCTGCAAAAGGCACATGCCCGGAAAAATGAGAAGATAGAATTTATGGAGGATCACATCAAACAGCTGGTGGAAGAAATTAGGAAAAAAACAAATGTTTTATTTTAC EMBV3_29696 CCTGTCTCTCTTATATGCCCAAAGGAAAATGTACAAAGAACATTAAAAGCCATTTCACAG Gene BVV0102_288512 + 0 NULL GK000024.2:31054881-31675532 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40650 GTCTGAAGTAGCTAGCAGTTTGGTTCTCGAAAGATCTCTGAATCGCGTGCAGTTGCTCGG Gene GeneID:515765|SSBP1:NM_001037466:667_cdna Constitutive 1 NULL GeneID:515765 4 GENE SSBP1 MGC133588 single-stranded DNA binding protein 1 EMBV3_14124 TCCGGCAGCCCCGGCTTAGACACCACTCACATGCAGATCCAAGAGAGAGTGAATTTTTCT Gene BVV0102_126898 - 0 NULL GK000017.2:60521908-60855768 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09743 TTAAGAGTGCAGTTATAGTTAGAGACAGAAGAGGCCAGTCAGGGTGAGGCGCAGAAGGCC Gene BVV0102_142867 - 1 EMBV3_28241 GK000030.2:58706140-58826555 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251263 1 XLOC_154206 NonCoding TCONS_00251263 XLOC_154206 NonCoding NonCoding - X:58820841-58822156 - TSS188484 1315 3 TCONS_00251263_3 93 0.975665399239544 1 0 0 0 0 0 0 0 1.33043177520942e-05 0 0 0 5.22249209371876e-06 0 0 0 0 0.00142602640785047 0.00784664333013115 0.00438693084419108 1.09063545141041e-05 5.46876578363604e-06 0 7.33601879704061e-05 0.000655787114804159 0.000924285503414181 3.24910499878957e-05 0 1.11390720007761e-06 1.46086260543344e-05 5.16840096366961e-05 0.000953272506172654 XR_228718.1 LOC100851952 PREDICTED: Bos taurus uncharacterized LOC100851952 (LOC100851952), 0.0 832 83.87 0.584790874524715 0 noncoding 0 0 0 0 -0.0290090925199228 0.786088261122157 -0.0284405825274482 0.674201135840125 TAGAACAAGTGTCTTAAGACATTAAACTGCCTTTGCAAAAAAAATATGTTTCTATCCCATTACCCACTGAAGTCGTCACCTGGGTACACCTCTCTCACCTCACCTCTGATCCTGTGCTGCCCTCCTTAACTGGCCCATATCAGGTCTCTCTCACAGGGCCTACCTCCTTAAAAATCACCCGGTGACAACCTCTGTCGACCATCCAAGAAGACACTGAATGACCTGGACACTCTTCAAACTACAGCTATTTCTGACCCAACTACTACAAGACCTCTGGACCAGCACCCTGTCAGGAACCTCCTTCGAAGACCTGGCCATGCTGGTGTCTCAACTGTGGCTTCAGGGAACCTTCTACAACCTGACTCCAGACGAAATTGGTTTCTTTACTCTAATTCTCTACATCATTCTACATCCTAATGAACACTGTTCCTCCTCAGATTCAAGCAACCTCCAACTTGGGGCCTTCTGCGCCTCACCCTGACTGGCCTCTTCTGTCTCTAACTATAACTGCACTCTTAATCTTAGTCCTTGCTATAGGCCTAGTAACTATCTCCCCTCAGGACTGGTCACTTATCCTTTGTCTTTCCATTGGTATCACCTAGGTTGTTAGCTGTGTTCTACTCCTAGGGTACTATTTCCTCTGCACTGCCTAACTAACAGAACCATGACTCCTCTGTTCCTTATCCTTGCTGTGCTCCCCAGCCTTCTGGCTAGTCCCTGCCCTTGCTCAGACATTTATTCCTATGTTCATTCCTCATGTTATAATACAGCTCCAAGACCATGCACCATGAACCTGGGGGAGAGGGGAAAGTCCAAACCCCTACTCACTGTTAAAGTACAAAAGAGAGGAAGTTTCATGAGCACCTGCCATAAGCCAAATGGAAAACAATGTTTCTATCCCATTACCCACTGGGGGTACTCAGATGGGGGTGGGATACTAGATTAAAATCAGAAAAAAAAGTTATAAAGAACTTAATTTCCCAGTTACAGGCGACCCCTGAGCCTTACAAACACCTAGACCTCCTTTCCCAATTACAACCTCTCATGAAACCTCCCTCTGATAACCAACACCTTACCTGCCTTCTCAACTCTTCTAATTCTTCCAGTACACGCAACACACATCCCAGTGTTGGATATGCATGTCACAGTCTCCTTCACCATACATAGCAATTCCCTTACCCTCAACATGGCTGTCACAGGACAACTATACCTTCCCTTCCCAACAAAAAACCACACAACTTATTGGGCCAGTGTCTGACAATGTCCTACTCTCAGCCTCTTCAAACCCAACCTGTATCAACTACTCTAGTCCCAA TCONS_00244505 . 5' 4400 TCONS_00244505 . 5' 4400 EMBV3_42112 CAGACTACATCCTAATATAAGGAAATACACTGTAAGTACACTTACAGATGTACTTACAGC Gene BVV0102_367100 + 0 NULL GK000006.2:16121998-16367503 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35713 CAATTGAACCGCACTCAAGATGGTCAGAGTCCCCTGATGAGGATGGTAAGAGGATTGGAC Gene BVV0102_183364 + 0 NULL GK000011.2:72787545-72793628 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028413 TCONS_00028414 1 XLOC_015470 Coding TCONS_00028414 XLOC_015470 NonCoding Coding C11H2orf18 11:72792325-72947411 o TSS19940 2061 3 TCONS_00028414_2 101 0.327510917030568 2 0.986723409743044 1.13260667801609e-17 4.15917785958519e-05 0.000283786303440298 3.19131536892086e-05 0.000146728644621022 3.20248175127764e-24 1.57273011569409e-05 1.47997372776838e-05 6.19319126277835e-05 8.58432450160935e-05 7.62335664431283e-05 1.55272378458988e-05 0 0.000189085012666843 0.000101739567937923 0.0136980878906869 0.00399434145734083 0.00241282460666085 0.00082591910893979 0.000189098154748394 5.94755082490859e-05 0.00281720093806259 0.0015820342815463 0.00471038294212973 2.53968274557287e-143 5.65181652559439e-05 6.55614589866807e-21 0.000388729375360771 0.000318012394787752 0.00203206564805156 NM_001083704.1 C11H2orf18 Bos taurus chromosome 11 open reading frame, human C2orf18 (C11H2orf18), mRNA. 0.0 1353 99.87 0.364871421639981 0 noncoding 0 0 1 1 -1.01904008643558 0.0261334745372374 0.0190362678134993 0.736509935072385 TGGGAGGAGAGAGAGGAGGTGGGGACTACAGCTGCTTGGGGGGCTTACAGTGTTGTTTCAGGGGTTTTATTTTTAAAAACAAAGGGAAATTGGCAATACGGACTTTTCTCTTCAGTGAGAAGGAAGAAACACAAGGGTTAGGACATTCCTGGAGGTGATGTCTAGAATGTCAGAGTGGAAAAACTCTAATGCACCAGAGAAATCATCCAGTCCCAACCCCCATTGTTCATGTGAAGAAGTTGAAGCCCAGAGAGGAAGACACTTCTCAGGAATGCACAGAGCCAGGGACTGGCAAAGCCAGATTTGCTGGTTCTCAGTCCTTTCCCATCCCGTTCTCCCATCGGAGCAGGGCTGGGAGTCCAGGACTGGCTAAAGTAAACAAATCATGGACCATGTGGATTTTAGCATCGAAGGGTTGTGGAGTGAGGGGCAGCAGAGCATGGGGAGGGGGAATCATAGTCAGGCCTGCCACCCACGCAGGCACCTGGCTTTAGGTCTTCACATCTCTAAAATGGGGAGGCCAGGCCTCACAGGATGGCTGTGGGCATTAACCTAAGGTAATAAATGGAAGGTACCTGTAAATGCTTGCAGTGCAGTGTCGTGTTAGGCTACTCTGCCCACCAGGGTGGCTGTCAGGTGCTTAGGTCCCAGAGAGCCCTGATGCAGAGCATCAGTTTTGCTTGGGGTTGGGGGGATCTTCTGTTACACTATTGTGGAGTAGAGTGTAAACCTCATGTCGATTATAAGATAAAACAGGATGCCTTGTGAAATTTTTATGTTGAACCTAAGTACCCCTCCGGACCGTGGAGGTGTATCCTCTCTGTCCTGGTGTCTGGGGGGCTTCAAAGGATGAGTGTGGGAGGCTGTGCTGTGTTGTTCTGGTAATGGGGGTGGAGAGGATAGGATCCCTACTCTCCCACTGAGCCTCGAGGGTTGTGGGGGACGTCTGCAGCTGTGGCCTACTGCTCTGAGCAAGGTAAGGGGGCCCTGGACCCCAAAATTAGAATTGACTGATAACAGACTTATCAGTTCAGATACAGTGTTATTCAGGCCATCTGCATTGTGAACTTACCAGTCCCTGCCCGATTCATAGTGGTCCTGGAAAACCCTGGGGCTGGAGCATCCTCCAGGGCTGCCATCCAGGCCCTGGAGGAGCCCTTGGGCTCACTGCCCACAAGAGAGACTTAGGACTGTGCCAGGCGGTTGCATTTGCCTTCACTCGTCCAAAGGTCTCTTAACAATTGAACCGCACTCAAGATGGTCAGAGTCCCCTGATGAGGATGGTAAGAGGATTGGACCAGATGGGCACGTGGTGTTGGGGGGAAGAAGCAGAAAGGGAGTCAGAGACCTGTGTCCTCAGCCCGCCCCTCCTTGACTGTGGCTTTAGACAAGTGATGTTACCTCTCCAGACTTTGGCTGCCTACAAGAGGGAGGTTCTTTGCTTCCTAAGTGTGTTCACCTCCCTGATGTGCTTGCAGATTGAGTTTGTTCTTTCATGTTTCCCTTGGTTAAGAGCCCACCCGGCCTTATGTTGACTACATCCTTTGAAAATCTGAGGTCATCAGGGGGTTTCTCCTATAGCCATAAAAGTTTATAGATCGCCCTTCTTCAGTAAGAACTCTGTCAAAAAAAAAATTTTTTTTTTCATGTTTTAAAGAATTTTTATTGGAGTATAGTTGATGTAAAGTGTTGTATTAGGGACTTCTCTGGTGGTCCCATGGTTAAGACTCCATGTTTCCACTGCAGCACTGCAGGAGGCATGGGTTCAATCCCTGGTCAGGACACTAAGATCCTGCATGGCACATGGTGCAACAAAAAATAAAAATAAAAAAGTGTTTTGTTTTTGCTGTATAGCAAAGTGAATCAGTTATACATATATCCACTCCTGTTTAGATAGACAGGTAAAAGGCCTCTGTAATGGCCTTTTCTTATAGGTCACTACAGAGTATTGAGTAGAGTTCACTGTGCCGTACAGTAGGTCCTTATTAGTTATCTGTTTTATATATGGTAGTGTGTATATGTCAGTCCCAGCCTCCCAATTTATCCCTCCCTTCCCTATCC TCONS_00028415 s 5' 0 TCONS_00028415 s 5' 0 EMBV3_31781 GCACCCAACATGGGAGCACCGCAGTATGTAAGACAAATGCTAACAAGTATGAAAGGAGAA Gene BVT0102_095951 + 0 NULL GK000015.2:2719505-3457479 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00010367 TCONS_00214738 TCONS_00078532 TCONS_00250553 TCONS_00098385 TCONS_00251853 TCONS_00165811 TCONS_00032587 TCONS_00141355 TCONS_00031938 TCONS_00177994 TCONS_00141464 TCONS_00210178 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00200531 TCONS_00198662 TCONS_00088289 TCONS_00056147 TCONS_00073692 TCONS_00116799 TCONS_00089425 TCONS_00019991 TCONS_00189806 TCONS_00197973 TCONS_00148253 TCONS_00207228 TCONS_00250544 TCONS_00239410 32 XLOC_131641 XLOC_142855 XLOC_005918 XLOC_130757 XLOC_047420 XLOC_153496 XLOC_058631 XLOC_154794 XLOC_100651 XLOC_018827 XLOC_085783 XLOC_018183 XLOC_107767 XLOC_085892 XLOC_128688 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_120316 XLOC_053076 XLOC_033950 XLOC_045454 XLOC_070965 XLOC_054210 XLOC_010669 XLOC_115843 XLOC_119632 XLOC_090135 XLOC_125746 XLOC_153487 XLOC_146076 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_38931 TGAAGGACGAGCTGGCTGTCAACAAGCAAAGCTGCAGTAGATGGCCCCTCGGACAAGAAG Variant GeneID:533949|BCAP31:NM_001014941:64_cdna 733^833 1 EMBV3_31429 GeneID:533949 X GENE BCAP31 NULL B-cell receptor-associated protein 31 EMBV3_14956 CATGAGTCTTGGAAAACTGAAGAGTGGGAGAAAAAGAAGACTGAAGCAGATATGGAAGAG Gene GeneID:513438|MRPS35:NM_001075619:8_cdna Constitutive 1 NULL GeneID:513438 5 GENE MRPS35 NULL mitochondrial ribosomal protein S35 EMBV3_10730 TCGGACTCGGAGAAGCACGAGGGAGAGAAACGGCAGATGTCCTTGGTGGATGAATTAAAA Gene GeneID:516065|ANKRD6:XM_002690181:55_cdna UTR3_Alt 3 NULL GeneID:516065 9 GENE ANKRD6 MGC137780 ankyrin repeat domain 6 EMBV3_00469 AGAGGGAAACAAGGATGCTCTCTCACCTGCTGCTCCAGCTTGGTCCTCCTGACACTCATA Gene BVT0102_151329 + 0 NULL GK000010.2:88379902-88467534 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018359 1 XLOC_009231 NonCoding TCONS_00018359 XLOC_009231 NonCoding NonCoding - 10:88418401-88419174 - TSS12365 511 1 TCONS_00018359_2 96 2 0.340673575129534 0 0 0 0 0 0 0 0 0 0 0 0 0 9.20546694011039e-06 0 0 0 0 1.40331400493358e-05 0.00208987870361581 5.9407608905446e-06 0 0 0 0 7.87271024823323e-12 0 0 0 0 XR_226948.1 LOC101903212 PREDICTED: Bos taurus uncharacterized LOC101903212 (LOC101903212), 9e-93 343 100.00 0.36986301369863 0 noncoding 0 0 0 0 -0.128276712449072 0.266200331624481 -0.0134219371877931 0.774441684286072 CCAGCCTTGCTGAGTCAGAATCTCCATTTTTCACAAGGTCCTCAGGCTGCCCCTCAGAAGGACACAGGAGGCTCCCTGCAAGCAGGAGGAGTTACTCGAGGCTTGCTCTGGACCTCAGCCTTGCCCCTTTCTCCTGCACCCCAAGTGGGGCTTCCCTGAACTTGGGCACAGCAGCCCCTTGAGGGAGGCGCTTGGGAGGGCAGTGCTCAGAGGGAAACAAGGATGCTCTCTCACCTGCTGCTCCAGCTTGGTCCTCCTGACACTCATAGGCAGCCAAAGACATTCTCTCCCCTGCCCAGGAATGTGGCACCCACTCCCTCCTTCAGGAACCCCACGAAGCCACGCGGCCTATGCCAGCAGCATCTTGGCCCGTGGGGCTGTGGCCCACGCCGTGTCTCATTCCAAACTCCTCAATCTCTCCCATTAGCTGAGATTGCAGGTTCAGAGCACAAACATCGCCACCTGTCACTGCAGCCGCAACTCCTCCGCCAGCCGGGAATGGTCTCGTCTC TCONS_00015325 TCONS_00015328 TCONS_00015330 TCONS_00015331 r 3' 38496 TCONS_00015325 TCONS_00015328 TCONS_00015330 TCONS_00015331 r 3' 38961 EMBV3_24509 ATAGCCAGAAGATGGATAAATGGCATGCTGGTTAATTTTCCCATGTGCACCATTGCGTCT Variant GeneID:512647|UBA3:NM_001075574:41_cdna 545^700 2 EMBV3_25102 GeneID:512647 22 GENE UBA3 MGC140052 UBE1C ubiquitin-like modifier activating enzyme 3 EMBV3_43069 CTCTCTGATCCCAAGAAAAAGACTCGCTATGATAGTGGACAAGACCTTGATGAAGAGGGC Gene GeneID:530254|DNAJC7:XM_002696025:474_cdna Constitutive 0 NULL GeneID:530254 19 GENE DNAJC7 NULL DnaJ (Hsp40) homolog, subfamily C, member 7 EMBV3_05379 CCAGGCTGCCACGTAACACTGAACAGAGCTCCTGTGCTATATAGTAGGTTCTTGCTGGTT Gene BVV0102_251493 - 1 EMBV3_38771 GK000013.2:60119698-60185128 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24313 GAATTAAAGTTTGACTAGGTTGTCATTTCCAAACACCACCCCCTGACCCCAGCCCCTACC Gene BVV0101_026675 + 0 NULL GK000029.2:44269695-44370407 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00167752 1 XLOC_102588 NonCoding TCONS_00167752 XLOC_102588 NonCoding NonCoding - 29:44287213-44288340 - TSS125730 1127 1 TCONS_00167752_1 35 1 0 0 8.91608308659857e-06 3.28446167877306e-05 2.2105092433497e-05 2.62849237366713e-05 9.5218569041639e-06 0 0 0.000245035554300966 0 0 0 7.63782332382048e-06 4.17390374824717e-06 0 0.00126550502850751 0.00299047473165742 0.000423005590664013 0 0 0 0 0.00266185315262571 0.00113053520366465 0 0 5.19889311905809e-06 8.52277868346354e-06 1.29226349135638e-05 4.26778609860449e-05 0 noncoding 0 0 0 0 0.196853386281377 0.231157080108869 0.0202586667947725 0.81144978080744 ATATTGATTTTTATAAAGATCATGAATTCCTTGTATAGTTGGGAAGGGAAGCTTTTGCCAGTGATTATCAAACTTACTCTCATTTTTTCCTTTTATTGTTGTGCTTAGAAAGTATTATACAAAGACATTTTAAAGATTGATGTAACAAGACTAATAATAACAATGAATTAAGACTGTTGGGTTTGCTTCTGATTACTTTTTCTTTAGCAGCTAAACATGTGTGTACTCCCACCTTACAGTAAATGCTGTCCTCCATTTAAGGAGTTATGTATCCAGCCTACTTGATGTCTCTAAACTAATTACACTGATAAAGTTGAATTATCAGAGTTGAATTATCAGACTTCAAGTAAATACTGTCATCACTCTTTTGTTCCAGGTCTGTCAGTATTAGCTTCTTGTCATTATCTGCCTGAATCTGCTTCTCAAATTTTTAGTCTCTAGTTTTTGTTGTTTCTAATCAAATGCTTTGGATTGTAATGACTTAGTGTTCATTATAAAATCTAGTAAGTGGAAGATATGATACTCCTTAAGACAAGACTATTCCTTCTCTTTGTTGGAACTTGAGCAGACAGAACTGGGCTAATCTTTGGTTCGAGACATAAAACATGGCTGTCGTTTTTTTGGTTCCATGATGTTTTAATGCTGTGGCAAACATTTCTGAATCTTCTAGTATATAACTAGGACTTGTAGACACTGACTTTGGCCACCTGTGTGGTTCTGCTCGTTCCCCTTCCTGCCTCCCTCTAAGCCAAAGTGGTTATGATCCTGAATACTAAGTTTTTCTTTTACTTATTCTTTTCTCATCTAACTTTGGAAAAAGGAAAAAACTTACCTAAATGAACTATAATTTTCATTTTAGTAGTTTTTAACTTTATAGAAAAAGTATATAAGTTTCTGGAATTTTCTCATTTAATGATGTTACCATTCATCCTTTACCTTAGTGTGTAGTTGTTTTGGAGCCTCTCATGTGACTATATGGACATAGTTAATGATTCCATTTTTCCCATTGTTTTTTATTATGGTCAGTGTCATTGGATAAGTGGTAGGTGGATGCTCTCTTATACAGAATTAAAGTTTGACTAGGTTGTCATTTCCAAACACCACCCCCTGACCCCAGCCCCTACCAC TCONS_00163913 TCONS_00163915 . 3' 4049 TCONS_00163913 TCONS_00163915 . 3' 5175 EMBV3_05219 ACATTGTGTTGCGTCTTGGCTGACCACTGGCCCCGCCCATTGTCTGTTTTCTTCATTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11632 GGACATCAGCCAAGTGGAGACCACATCCAGCTCGAACTTTCCAAACTACATTGCAGCCAT Gene GeneID:510109|ABHD11:NM_001034372:128_cdna Constitutive 1 NULL GeneID:510109 25 GENE ABHD11 MGC128235 abhydrolase domain containing 11 EMBV3_27363 GGTTTTATCGTGTCCCAAACGAGAAGAATAAATCTGTCAACCCGTAACCTGGGAAGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41809 CCAAGGGCTATCACAACTAGCCTCTGCCAGGTTTCATGGGCATAACCTTTAACTAGAGGG Gene BVV0102_400155 + 0 NULL GK000007.2:40140497-40184556 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16714 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42047 GACTTTGTTTACAGCAAGTCCACTCTGCCTCTTCAATGCCTACCACACTGCAGGTGTCCA Gene GeneID:540342|ZNF45:NM_001076213:364_cdna Constitutive 0 NULL GeneID:540342 18 GENE ZNF45 MGC137974 ZNF235 zinc finger protein 45 EMBV3_29210 CACACACAGTTACTGGCCAAGACAATTGAAATTGGCCTGCAAGGTGATGTGACTGATCCA Variant GeneID:353353|TRDMT1:NM_181812:67_cdna 190^267 1 EMBV3_16235 GeneID:353353 13 GENE TRDMT1 DNMT2 tRNA aspartic acid methyltransferase 1 EMBV3_17173 CACACTGGCGATACTATGGAGACAGTTGCTATGGATTCTTCAGGCACAACCTGACATGGG Gene GeneID:784092|CLEC1B:XM_002687807:82_cdna Constitutive 0 NULL GeneID:784092 5 GENE CLEC1B NULL C-type lectin domain family 1, member B EMBV3_10778 GCCTTGATATTGATACTGCTAAGTCTATGTTAGCTCTTCTCCTTGGGAGGACATGGCCAC Gene GeneID:508759|DCUN1D5:NM_001046012:8_cdna Constitutive 3 NULL GeneID:508759 15 GENE DCUN1D5 MGC137775 DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) EMBV3_21922 CAGACTCTGATTTTACAGTTTCTTGAAGAGAGACATCTCAATGGCAGAATGCAAAACGGG Gene GeneID:789224|BTNL2:NM_001102351:12_cdna Constitutive 0 NULL GeneID:789224 23 GENE BTNL2 MGC139091 butyrophilin-like 2 (MHC class II associated) EMBV3_27279 GTAGTCTTACCCTGATAGGAACAGTCAGTACTAGGGCAGTTTGCAAAATGTTTTTATTTT Gene GeneID:539035|RNF13:NM_001076142:50_cdna Constitutive 0 NULL GeneID:539035 1 GENE RNF13 MGC139057 ring finger protein 13 EMBV3_11931 TTGATTGAACACCTGGAAGTAGCAATAAAGGGTTTAAACTTCAGTGGTGCTGATCTTTCT Variant GeneID:613717|KCTD9:NM_001102269:10_cdna 700^795 4 EMBV3_07620 GeneID:613717 8 GENE KCTD9 MGC159927 potassium channel tetramerisation domain containing 9 EMBV3_42299 CTTTCGACTCCCTGAATGCTTTCCGACGTTTCGGCTCCAACTACAGTCGTGTCAACTATC Gene GeneID:618782|TEPP:XM_002694795:624_cdna Constitutive 2 NULL GeneID:618782 18 GENE TEPP MGC134171 testis, prostate and placenta expressed EMBV3_36757 GTAGCCAGGAAATGATTGGGTCCTTGCAGAGGTTCTCTACACCCTTGATGTCTCTTTCCC Gene GeneID:521637|LPIN3:XM_002692465:518_cdna Constitutive 0 NULL GeneID:521637 13 GENE LPIN3 NULL lipin 3 EMBV3_24518 CTGGGAGTGCGACAGTTTGCACTGTCCTTCCCGTCTCTGTCTTCTCAGGATTTAAAGTTT Gene GeneID:615059|SLC6A4:XM_002688430:49_cdna Constitutive 0 NULL GeneID:615059 6 GENE SLC6A4 SLC6A4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 EMBV3_08223 TTCGCTTCGCAGAGTTGGGCTGACCTATAGATCATCGAAAAACACGCAGGACACAGTCGG Variant GeneID:525647|MKNK1:NM_001035358:200_cdna 217^416 1 EMBV3_37436 GeneID:525647 3 GENE MKNK1 MGC133983 MAP kinase interacting serine/threonine kinase 1 EMBV3_26449 GAGACACTACTGGGAGGTAGAAGTAGGCAACAAGACCGAGTGGGAGGTGGGCATCTGTAA Gene GeneID:520202|TRIML1:XM_002698660:122_cdna Constitutive 0 NULL GeneID:520202 27 GENE TRIML1 NULL tripartite motif family-like 1 EMBV3_19875 TCGGACGCGGCCCCAGAGACGGCACCAGGAGGCTGACTGTAAAATTTAAAGATGTAAGAT Gene GeneID:100299737|LOC100299737:XM_002698507:3_cdna Constitutive 0 NULL GeneID:100299737 26 GENE LOC100299737 NULL hypothetical protein LOC100299737 EMBV3_39186 TGGTATCCTCCTCTTCATCCTCACCAAGCGGGAAGTGGACAAGGACCGTTTGAAGCAGAT Gene GeneID:616561|PNKD:NM_001046583:125_cdna Constitutive 0 NULL GeneID:616561 2 GENE PNKD MGC137001 MGC159852 paroxysmal nonkinesigenic dyskinesia EMBV3_20802 TGAGCCCTCACCAACTGCCAAACAGCACAAAAAAGCCAAGAAGCGCAAGAGTCTGGGAAC Gene GeneID:788008|LOC788008:XM_002694823:703_cdna Constitutive 0 NULL GeneID:788008 18 GENE LOC788008 NULL hypothetical LOC788008 EMBV3_19754 TTGAAAAACAGGATCCAATACAAGACTGGGTTGCAGCATCCACCACTTACCTGAAAGGTG Gene GeneID:407768|ST8SIA4:NM_001001163:14_cdna Constitutive 0 NULL GeneID:407768 7 GENE ST8SIA4 SIAT8D ST8Sia-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 EMBV3_04227 GCTTGCACCAAACATTGCAATCATCAGCAGGATTCCAGTTCTGAGATGGATTTAAGCATT Variant GeneID:505979|STON1-GTF2A1L:NM_001080229:53_cdna 334^794 2 EMBV3_32924 GeneID:505979 11 GENE STON1-GTF2A1L ALF MGC127834 STON1-GTF2A1L readthrough EMBV3_00237 ATCAGCACGGTTGATGTCACTTGCTGGGGTCGACTTTCCAACTCCAAGCTTTTGGTGGGT Gene GeneID:523833|ZNF488:XM_002698984:161_cdna Constitutive 0 NULL GeneID:523833 28 GENE ZNF488 NULL zinc finger protein 488 EMBV3_38521 CTGTCCTTCGGTGTCACGGCCAGGATGTCCGGCAACCAGGACCAAAGGGACAGAAAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14223 CAAGCCTGGGGTTACAGCGGTGTTTGTTCCCTGATGAGGGGATGGAGGCAGCTCCGTCCT Gene BVV0102_432198 + 0 NULL GK000015.2:81859815-81869682 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20407 ACATGCCCTTTCCAAGAGGAACCCCCGCCTTGCCCCACCCCTACTAGATAAGTTTTGAAA Gene GeneID:100271720|F8:NM_001145508:53_cdna Constitutive 0 NULL GeneID:100271720 X GENE F8 NULL coagulation factor VIII, procoagulant component EMBV3_23094 TGCCAACTTGAACAAAGGCTGAGAACCAGCCACACCGTCATTAGGGTAGAATAGGCTGTG Gene GeneID:527058|RLF:XM_002686459:487_cdna Constitutive 0 NULL GeneID:527058 3 GENE RLF NULL rearranged L-myc fusion EMBV3_08323 ACAGATTTGCAGCACAGAGTCTCGGCCTGTTTCACTCCTGCTTCTCTCAGCTAGCCTTAG Gene BVV0101_039341 - 0 NULL GK000010.2:77502098-77515538 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017976 TCONS_00017969 TCONS_00017970 TCONS_00017973 TCONS_00017968 TCONS_00017974 TCONS_00017977 TCONS_00017971 TCONS_00017967 TCONS_00017975 TCONS_00017972 1 XLOC_009148 Coding TCONS_00017969 XLOC_009148 Coding Coding MAX 10:77514253-77541660 j TSS12164 2104 3 TCONS_00017969_3 103 6 0.923447420272933 0.00315400087578508 0.00108129546478295 0.00276837569271829 0.00347681570335782 0.00431100416804102 0.000309384567659049 0.00132882309911307 0.00209206044827566 0.00308271375161438 0.00443959316193565 0.00153237431098111 0.00149480299218355 0.000811271983953704 0.00273267959086258 0.00111006398225197 0.00467044181177888 8.1763321161055e-06 0.00111519889918527 0.00345332972937771 0.00199421299689189 0.00105081204082914 6.52632441131323e-07 0.000704602829208028 0.00052195200766645 0.00771485555999484 0.00429086940300704 0.00415973833673317 0.00116253376388066 0.000401922041077462 0.000350178073088773 XR_236197.1 MAX PREDICTED: Bos taurus MYC associated factor X (MAX), transcript 0.0 3755 99.24 0.998098859315589 NM_145113.2 MAX Homo sapiens MYC associated factor X (MAX), transcript variant 3, 0.0 2870 89.70 0.999524714828897 TCONS_00017969_2 sp|P61244|MAX_HUMAN MAX_HUMAN Protein max; 1e-66 202 100.00 0.941747572815534 1 noncoding 0 0 1 0 -0.29112360075585 0.120569614089029 -0.0529774946153048 0.433148685814728 TGCCGCCGTTGATCCGGTGCTGCAGTGAGGAGGTGGTTCTCGCCCGTGTTGTGTGTGTGTGTGTGTGAGTGAGAGAGCGAGTGAGTGAGTGAGTGAGTGAGTGTGTGTGGGGGGGGACTCGGCTTGTTGTTGTCGGTGACTTCCCCCTCCCCTCCACCCCTCCCCTTTCCCCGCCGCCGCTGCAGTGGCCGCTCCCTGGGCCGTAGGAAATGAGCGATAACGATGACATCGAGGTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAACGCAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCGGTCCCCTCACTCCAAGGAGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAGTATATCCAGTATATGCGAAGGAAAAACCACACACACCAGCAAGATATTGATGACCTCAAGCGGCAGAATGCTCTCCTGGAGCAGCAAGGGGAAAGCGAGAGCTGATCAAGTTCTTTGTTCCTGGGGAATTCACTTCTCTTCCTCCCTCATGGAAGATGCAAGTAAAAGGAAATTCCGTGCACTGGAGAAGGCGAGGTCGAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAGCAGCCTCTACACCAACGCCAAGGGCAGCACCATCTCTGCCTTCGATGGGGGCTCGGACTCCAGCTCGGAGTCGGAGCCTGAAGAGCCCCAAAGCAGGAAGAAGCTCCGGATGGAGGCCAGCTAAGCTCTGCGGGGCAGGCCAGCAATAAAAACTGTCTGTCTCCTCCGTCGTCTTATCCTCCTTTCAGTTCATCTTTAGAACCCTCAGAACCATTTAAGAGACTCTTGGGTTTTTTTTTCCTCTTTCTCATTTTTTTTTTAAATTTTATTTTTACGTAGAAGCTCTTGGACAACAGCTCTCGTTCTCCTTCCCTATTTCCACTTTTTTTTTTTTTAAACGTTTCCCTTCAGGGATTCCCTGTCCCCACCAGGAATTTTTAAACCAAAACACCCCAACTTGGCAGCTTTCTCTGTGGAGGACAGACGGCCGGCCAGACCTCTGAGCACATGGTGTCCTGACCACCCACCAGCTCCTCCAGCCCCGCTGGGCACGTGCCCGGGGGACTCCTGCCCCACCCAGGCCTCTCCTTCCGGGCCATCCTCACCTCTGTTTGATAGACTTTGTGAATCTGTGGACTGCTCTACTTTCAGAAGATGACCAGTTTGGAGTAATCAGAATTATTCCCCCTTCTTTTTAAGGATTTTTCCCCCCCTAAAAGGCTATTTATCGCTCCTATTGAAAGACCAGATCCTTGGAGAAGTTTGTGGTATAAGAGGAAGTGGGGACAGATTTGCAGCACAGAGTCTCGGCCTGTTTCACTCCTGCTTCTCTCAGCTAGCCTTAGGGAGGCCGTGTGGCGCTTGTGTGGTGTGAGGGGACGGCAGCATGGAGCGGGAGTCGCCAGGGGGTGGAAGGGGTGGGTGGGCCGAGGAGGGGGCATTGGGTGGAGTAGAGGTTTTGTATTGAGGGCCAGTGATGATGTTTTGATATTTATTTCCTGCTACTGAAATTTGAACCTGAGTGAATTGTCCCTATGATGATGTCGGTATTGCAAAGCGACAGATTCATAAAGTAATGATCAAATCTTCCTTTCTTTCCGTGTGTATTTCTAAGAAATAGAGCCAACTGATTTTGTATGTAAATACCAAGAGCGGTTCACCTCGTACTAAACCCGCACCCCAGTGCGGACCCCTCCCCACCCTCGCCCGCCCCTCCCCTTCCGACTGTCCTGGAACCTGTCCCCATTATGTGATCCAGCCCTGGTTCTGGCTGCGGTCAGCAGATCCCAGTGAAGGGTTTTGTGTGTTTAGGCCTCATTTCTTTGTCTTTTTCCTACTCTGTTCCCGGCATTTGCTGATTTCTAGTGTATACTCTGTAGTCTCAGTCCGTGTTTGATTCCATTCCATGGAAATAAAAAGTATGTTGTACATACTGCTGAAGAATTGTCTTGCAAGTTAAGGCTTTCCCCTTTACTATAAGACTATAAATAAAAACTTATTTTATCCTTCTT EMBV3_00506 CTTACAGACGCATGAATGTAAGAGTAGGAAAGGGGTGGGTGTTAGGATCACTTGGGGATC Gene GeneID:529235|DDIT4:NM_001075922:347_cdna Constitutive 0 NULL GeneID:529235 28 GENE DDIT4 MGC139459 DNA-damage-inducible transcript 4 EMBV3_32158 CGTCTGTCGCCATGTGTATAAGAGAGTCTACAAAGTGCACCCGGACACCTGCTTCAAGGA Gene GeneID:514207|SNED1:XM_002686620:144_cdna Constitutive 0 NULL GeneID:514207 3 GENE SNED1 NULL sushi, nidogen and EGF-like domains 1 EMBV3_40228 CCTGAGGGCAACGCAAGCAAACATTTTACTGGAAGTTGGACAGAAAGCAATGCTGGTATG Gene GeneID:786878|LOC786878:NM_001105642:17_cdna Constitutive 0 NULL GeneID:786878 8 GENE LOC786878 MGC148320 MGC152365 Transmembrane protein C9orf134 homolog EMBV3_35136 GCCAACCATCCCCCCAATCATTCATCCACCGGTTCCAACTTACGAGGACACAACAGTGAA Gene GeneID:359713|RAX2:NM_182653:167_cdna Constitutive 0 NULL GeneID:359713 7 GENE RAX2 QRX retina and anterior neural fold homeobox 2 EMBV3_21668 CAAAAACTAAAAAGCCTGTGGAAAACGAAGTGATGAGGAAGAGGACAGAGTGTCTTTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29435 GCAGATGGGGTGGCCCCAGCGCAGCCTTCGATTCGATATCGCAAGGACCGTGCGGTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18232 ATGATAGATTATTCCAGGGAATCTGCAGTGGAGTCAGGAGTTTCTGGTTCTTGGCCCAGC Variant GeneID:100174927|LOC100174927:XM_002686880:70_cdna 329^383 1 EMBV3_05150 GeneID:100174927 4 GENE LOC100174927 NULL hypothetical LOC100174927 EMBV3_25849 AGCTGAGCACCGTTCCTGTTCCACTTGTCATCTTGCCGGTCAGCTTTCCCCAAGTCTTTT Gene GeneID:789409|PRPSAP1:NM_001076857:50_cdna Constitutive 0 NULL GeneID:789409 19 GENE PRPSAP1 MGC140645 MGC159999 phosphoribosyl pyrophosphate synthetase-associated protein 1 EMBV3_33241 ACAGCCTATAACCATCTTTTCGAAAGTAAGGGTCCACCAAAATATACAAAATCTGTTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22473 TACCACGTCCACGAGTGTGTTTAATGTCGTCCAAGTCGAAGAGGGAAGAGGGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_35239 GCTTAACCCGGAGCGCACAGCTGCAGGCAACTTGGAGAGCAAGGAGTTCTCTTCATTTTA Gene BVV0102_067852 + 0 NULL GK000014.2:58445788-58537058 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10624 AGGACTGGAAGAACATAGCCAAGATGCCAGCCCAGCTCTGGTGGGGCCCGGCCCCTAATG Variant GeneID:505159|FDX1L:NM_001080226:303_cdna 651^734 7 EMBV3_20050 GeneID:505159 7 GENE FDX1L MGC152067 ferredoxin 1-like EMBV3_32463 CATGGGGTTGCAAAGAGTAGGACACAACTGAGCGACTTTCCCTTTTAAAAGACAACTGAC Gene BVT0102_232936 + 0 NULL GK000003.2:42448924-42465563 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169674 TCONS_00169670 TCONS_00169673 TCONS_00169672 TCONS_00169677 TCONS_00169676 1 XLOC_103417 Coding TCONS_00169672 XLOC_103417 Coding Coding DPH5 3:42408557-42452199 j TSS126970 5540 1 TCONS_00169672_1 285 0.478158844765343 8 0.873238468412731 0.000291803223682759 4.85070989318082e-08 0.000130126695182732 1.98958448799696e-06 8.87460660085521e-05 7.87899548042533e-05 8.57001798663859e-05 2.43108520685875e-10 6.20635346983528e-07 1.47352641824871e-09 7.25840019220494e-10 7.34340523275521e-09 2.70139378083091e-06 0.000165375785614696 3.68585537321995e-05 6.89437567477409e-09 0.000711073702732406 9.83417845146104e-06 4.10290020212056e-05 1.55513818499819e-05 0.000203117963679321 2.27509475571788e-09 2.66109406696544e-08 0.000138815564710019 0.000172913358804286 7.4794152637783e-05 8.37257965099811e-05 6.05235358914185e-05 9.87646267298266e-09 3.28967746919063e-05 XM_005204095.1 DPH5 PREDICTED: Bos taurus DPH5 homolog (S. cerevisiae) (DPH5), 0.0 8843 100.00 0.884837545126354 NM_015958.2 DPH5 Homo sapiens diphthamide biosynthesis 5 (DPH5), transcript variant 0.0 1283 90.31 0.169314079422383 TCONS_00169672_1 sp|Q5E982|DPH5_BOVIN DPH5_BOVIN Diphthine synthase; 0.0 587 100.00 0.996491228070175 1 coding 1 1 1 0 0.0352646337598891 0.829670126439931 0.0177984883802976 0.73705987086594 GGTGAGGCCGGCGGCGTGGATCCTTTCTCCGGTCACCCTCCCCCTGTTATTTGAGATGCTTTACATGATTGGTTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAAGGGCCTGGAAGTTGTCAGACGCTGCAGTCGAGTGTATCTGGAAACCTATACGTCAGTTCTGACTGTAGGGAAAGAAGTTCTGGAAGAGTTTTATGAGAGAAAATTGATTCTTGCTGATAGAGAAGAAGTGGAACAGGAGGCAGATAATATTTTAAAGGATGCTGATATCAGTGATGTTGCATTCCTTGTAGTTGGTGATCCATTTGGGGCTACAACACACAGTGATCTTATTCTGAGAGCAACAAAACTGGGGATCCCTTATAGAGTTATTCACAATGCATCCATAATGAATGCTGTAGGCTGCTGCGGTTTGCAGTTGTATAAGTTTGGAGAGACAGTGTCTATTGTTTTCTGGACAGACACTTGGAGACCAGAAAGCTTCTTTGACAAAGTGAAGAAGAACAGACAAAATGGCATGCACACATTATGCCTACTAGACATCAAAGTAAAGGAGCAGTCTTTGGAAAATCTAATCAAGGGAAGAAAGATCTATGAACCTCCTCGGTATATGAGTGTCAACCAAGCAGCCCAGCAACTTCTGGAGATTGTTCAGAATCAGCGAATACGAGGAGAAGAACCAGCAGTCACCGAGGAGACACTCTGTGTTGGCTTAGCCAGGGTTGGCGCTGAGGACCAGAAAATTGCAGCAGGCACTTTGCAGCAGATGTCTACTGTGGACTTGGGAGGACCATTGCATTCCTTGATTATCACTGGAGGCAGCTTGCATCCACTGGAGATGGAGATGCTAAGTCTGTTTACCATACCAGAAAATAGCTCAGAAGCCCAAAGCATTGGTGGACTCTGAATACAGGCATCTTCTATTGTGAGATGTTAATTTCAGTCATATATACACATACATGTATTTGTGTAACAAATCCAATAGGTCTTTTGGTTTACCTAATAAGTATAAATTGAGTGACCAAGAAGAAAGATACTCCAACAGTGCTTGGTTTCCTGTGTCAATGAGTTTTTACCCTGTGATATCATCAGTTGTTGCTGCTAATTTGGCAGTTTTTCAGGATGAACATAAGTGGAACAGACCAAACTGGAGAACTTACAGCTAGATAGCCATAGACAGAATCATTTAAAGGCAATGTCTGTTTATGAAACCAGTTTATACAAGATAGAACTTTCTTCTCTCTTAAAAAGTCTGATGTCCTGACTGCAAGATACATTGTCCTGACAGCATGTGGTATTAATACATATAAACAGAGATGAGAAGAATATGTTACCAGCCAACAGTCCCACTTACTTAGGGCTCAGCTGAGCACACGCCACAGAATGACATCCTTTTGCATTGCTTTGTGTTGTTTAGCTGACGTCCTAATTATGTGCCTCGTATTCTGCTGTATTTTGGAGGTTATATAATTATTGAATTATAAATGTTCAGGCAGCCATGAACAGTTGCTGTTTGGTTTTAAATAGCATCTTTCACATCCATGCTGAAAAGTGGAAAATTTGCTGACTACAAAATAAAATTTTTAAAAATTTAAGCTTGAAGACAGCAATAGATTGGTCAAGATTTGTCATATCACTTAACAGTTAATATGCCTCCCTATGTATGCAAGTAGCCACATTCTTCTTCCTAGTTGTAAATCACACTCCATTTATTATGTTTCATGACTATGAAGTGTTACACTTTTTGTCAGTTCAAAATAGAAATAGCCTTGCTCCATGGCCTTGCTTCAGTTGGTCTAACTGATTTCAGTTGACCCTTGAACAACACAGGTTTGAACTGTGTAGGTCCACAAAATACATACTGAGTACTGCACAGTCCGGTCGGTTGAATCTGCAGTTGGTTGAATCCATGGACATGGAACCACAGATGTTTTCAACTGCATGGAAGGGTCAGTTCCCCTAACTCCTATATTGTTCAAGGTCAGTCAACTCTGTTTCCATGGCCTAATCAGTTTATCTGACCTCTTTGCTCAATAGATTCACTAAAGTTCATCAACTACTTCCCTCTTTTCTGGGAGCAACAATTAATAGGAGATTATTTTGAGTTACTTCATTTGAGATAAAAGATATTTTAATATATGTGAACCATTCTATTTTCAATCTGTCAGATGCAAAATAAGAGAGACCCAAGGACATTTAAGTAACAGTTCTGTATTTTTTTTCTAAAGCATTAAATTAAACAGTGAAGAATTATAAAATGAAGGACTTCTGATTTGGGTAGTGGTGGAATAGGTTGCAATGTACAAACTCTCCCAATGATAAACTCTGGGAAAATATAACAAATAACTGTCTAAAGGCACCAAGGAGTGACCAGAAGTAGTAAGAGAACTATACTTACATGATTTTTCCCTCAGGGAATTTACCAGTCAGTCTGGTGAGTGGGAGGCTAGAATGGAAGAGAAAGTTTAAGTCTTAATGACTTGAGTTGTTGGAATTGGCTGCTGCTGGAGGAGCTGTATACTGAAGGAGAAAATTCTAGAAATGAAGGTGGCACTGAGGGAGGAGACTTCTAATCTGCATGATCTCCTCTTAAATCTTTGGCTAACTCTGGCATTGTGCATGTGCAGGGAAGACTCCAGTGAACCTGATGGAAAGCTGTAGCTGGGAGACTGAAAAAGCTAAGCAGAGATTGTTGCTCTCTGTTGCAAGAGAACTCAAGAGTTTGAATCCCAACAAGTTAGAAAGCTTGTACCTTAGACTTTGCATCAAATCCCTAGAATGGTTGTTTATTAGCAGTAAAGGCTGTGCCTAGGGCTAAGGATTTGTGCTAAAACTAAAGACAGAATCTTTAACATAATGTGAAATCAAGCCTCCATAAAATCAAAGTGACTAGCCAATAATTACCTGCCTGCTAGAACAAAGCTTATCATTTCCAGAGCATAATAACAAAATGAATCAATCTATCAACAATGCCTCGAATGCTATAAAATATTATGAGGCATGCAATGAAATAGGAAAATATGACTTAAGGTCAAAAAGAGAAAAACACACAGTAAAAAGAGATCCTACCAACCCAGATATTGGAATTAGCCAACAAGGATTTCAAAGCAGCTCAGAACTGTGTTCAAGTATGAAAAGGAAAAGTGGTTGTAGTGAATTAATGTAACTGAGTACTCTTAGCAGAGTAATGGAAACAAAGAGAAAACCCCAAATGGTTGAAGTTAACAACAGAGTGCAGATGATGAACAGAAATTTTCTGAGGAAAAAAGGTTGGAGGGAAGAATAAAAGAGCACAGAACCTCAATGCCATGTGAGGCAGTATCAAGCAATTCAACATATATGTGATTGGGTCCCCAGAAGCAGAACAGAAAACAAATAGGACAGAAAAATACAAATTAAACAATCTTCATGAAAGCAGAATTAGTCACCAGCAGACGCACACTACAAGGAAAGCTGAGGGAAGTGTTTTGGGTTGAAGGTAAATGACAGCTGAAAGAAAGGAAATAATAAAATGTAAGTATAAATGACTATCAGATTTTCTTTGCTTTATGTTTTTAAAAGCTATTGGGCTTTCCTGATAGCTCAGTTGATAAAGAATCTGCCTGCAGTGCTGGAGATCCCAGTTCGATTCCTGGCTTGGGAAGAGCTAGTATTCTTGGGCTTCCCTGGTGGCTCAGCTGATAAAGAATCCGCCTGCAATGCGGGAGTCCTGGGTTCAATCCCTGGGTTGGGGAGATCCCCCGGAGAAGGGAATGGCTACCCACTCCAGTATCCTGGCTTGGAGAAGTCCATGGACTGTATAGTCCATGGGGTTGCAAAGAGTAGGACACAACTGAGCGACTTTCCCTTTTAAAAGACAACTGACAATTTAACATAGTATTGTGGCATGTATTTAGCTATAAAATATGTGCAAACAATAACACAAGTTGCAGGGGGAAAGGGAATTATACAGTTTCAGGATTATTACATTTTATTTGAAGTAGTAGAATAATAACTGTAGGTAGACTGTGTTAAGGATATATATTCTAATCCTTTGGCAACTACTACCAAAAAAAAAAAAAAGCACACACACACACACACACACTTGGCAGAAGTTAAAAAAAATGAGAAGAATTAAATACTGAAAGACATATAATTAACCAAAAGAGGACAGGAAAGGAGGAAATAAACATTAAAAAACATAGGACAAAGAACAAGCAAATAGTGGAATGGAAGACTTAAATCCAGCCAAATCAATAATTGCTTATTGGTATCACAGTTGTAAATTAAGTAGTCCAACCAAAAGGAGTAGTTTTTTTTTCAAAGGCTCAACTATATGTTGTCTACAAGAGTTAAACTTTATATATAAAGACTCTGGATGAAAGTAGAAGAATAGGGAAAAAATAAACAATACAAACAGTAAGCATAAGAAAACAAGTGGCTGTATCAGCATAAGACAAAATAGACTTAAAAAGAAGGAGTATACTAGAGATATACTTTTCATAAAGAAAATGGGCAGTTCATCAAGAAGACAATCCTGCATGTGTATGCATTGAATACCAGCTTGAAAATACATAAGGCAAAAATTGGCAAAATTGAACGAAGATGCAGACAAATCCACAAAGTTGGGGATTTTAACAACCTTCTGTCAGCAACTGATAGAAGTAAACAATATCAGTAAAAGTATTGATTTGAACAAACCAACCATTTAGGTCAAATTGTTAGGTCACTACAGTCAACAGTGGTAGAATAGATATTTTCAAGCACACATGAAACACTTATGAAAGTAGACCGTAAGCTTGGCTATTGACCACACTGAAATTAAATAAAAATTGCTGGCAAAAAAAAAAAAATATCTCTAAAAGTCCCAAAATTTGGAGATAAAAGAATGTATTTCTGAGTAAAAACATAAACAAAATGTGAAAATTTGTGGGATTCAGATAAAGTAGTATTTAGAAATTTACTGCTTTAGAAAAGAAGAAAGTTTTAAAATCAGTGATCCAATTCTGGAAAAGCAGAGTGTATTAAATTTTAAGTAATTAGAAGGAAGCATCCTGGAATGCAAAATCAAGTGAGCCTTAGGAAACATCACTACGAACAAAGCTAGTGAAGGTGATGGGATTCCTGTTGAGCTATTTGAAATCCTAAAAGACGATGAGCTGAAAGTGCTGCACTCAGTATGCCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAATGTCAGTTTTCATTCCAATCCCAAAGGCAATGCCAAAGAATGCTCAAACTACTGCACAATTGCACTCATCTCACACACTAGCAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAACAGTATGTGAACTGTGAACTTCCACATGTTCAAGCTGGATTTAGAAAAGACAGAGGAACCAGAGATCAAATTGCCAATATCTGCTGGATCATCGAAAAAGCATGAGAGTTCCAGGAAAACATCTGCTTTATTGAGTACACCAAAGCCTTTGTATGAATCACAACAAACTGTGGAATATTCTTAAAGAACTGGGAATACCAGACCCCTGACC EMBV3_37475 CAGCTGAGAAGGAGGTTCAAGGAAAAGCTCGGCTGCAGGACTTCATAGAGAATCTGCTGC Gene GeneID:521207|ZNF365:XM_002698850:60_cdna Constitutive 0 NULL GeneID:521207 28 GENE ZNF365 NULL zinc finger protein 365 EMBV3_01580 CCCTTAGTTTTGAACAGCTTCCCCATTTCCTGACCCAGGCCCAGAAAGTACTTGAGGATT Gene GeneID:534657|ST7L:NM_001083481:149_cdna Constitutive 0 NULL GeneID:534657 3 GENE ST7L MGC151593 suppression of tumorigenicity 7 like EMBV3_00009 CCGCACCGTGGGCAGGCGGAACACGTTCATCGGAACCCACCGCCCAGGCTCAAGTCCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08527 GGTTTGATCCCTGGCTCAGGAAGAGTCCCTGGAGAAGGAAATGCCAGCCCATTTGAGTAT Gene BVV0102_042685 + 0 NULL GK000022.2:11774317-11789926 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38191 CACACTGTTTACTGAGTTCACTGACAGATGGGAAGACATAGAGTTTCAGGGGCCTTCTGC Gene BVT0102_039906 + 1 EMBV3_09166 GK000001.2:66972769-67036725 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01609 ACCCTATGCATTTTCCCATCTGTGGGTCAAGGGAGATCCACCATTTCTTCTGTGAGGTCC Gene GeneID:787611|LOC787611:XM_002689157:172_cdna Constitutive 0 NULL GeneID:787611 7 GENE LOC787611 NULL similar to olfactory receptor Olfr332 EMBV3_04918 CTACGAGCAGTATGCCCGGATGATCTTCATGGAGCTCAACGATGCGTGGGCTGAGTTTGA Gene GeneID:511296|GAK:NM_001046084:4_cdna Constitutive 0 NULL GeneID:511296 6 GENE GAK MGC127293 cyclin G associated kinase EMBV3_06779 GGGTTTTAGTTGCTGACCCTGCTGAGACACTATACACTCCAAGCTTCTGGTGACTTTTAA Gene GeneID:510909|STX6:NM_001082431:20_cdna UTR3_Alt 2 NULL GeneID:510909 16 GENE STX6 MGC151807 syntaxin 6 EMBV3_16675 AGGAGAGGACATCCACCAACCTGTGTGCCAGCGTGGAGCAGAGACTGGCCGCCATATCCA Gene GeneID:100335341|LOC100335341:XM_002698599:20_cdna Constitutive 0 NULL GeneID:100335341 26 GENE LOC100335341 NULL Chromosome 10 open reading frame 92-like EMBV3_07722 TTTCTGGAATCGGGTTCTTTCTAACGCCCTCTTGTAAAGAGCTTGACGCCCCAAGCCCAC Gene GeneID:533202|VAC14:NM_001082444:121_cdna Constitutive 0 NULL GeneID:533202 18 GENE VAC14 MGC148468 Vac14 homolog (S. cerevisiae) EMBV3_07894 AAGCCACAGGAAGAGGTGCCTTTGTAACACTGAGAAACTTGCCTACAAAGCTGTGCTCAG Gene BVT0102_046351 - 0 NULL GK000013.2:70524396-70534060 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046125 TCONS_00046126 TCONS_00046128 TCONS_00046124 TCONS_00046127 1 XLOC_026622 Coding TCONS_00046128 XLOC_026622 Coding Coding ZHX3 13:70532014-70642045 j TSS33510 5771 1 TCONS_00046128_5 944 4 0.947587021721349 0.000928553584039726 0.000234769880413632 0.000125543730048713 8.79903915775192e-05 0.000405677383029998 0.000100385406740174 0.000111169714092487 0.000241581578826932 0.000251226473825767 1.38475795674192e-05 1.4701358950035e-13 6.08401285677696e-09 9.10662078804938e-17 7.11579678669214e-05 2.51229130166174e-13 7.22226995574903e-11 1.69500780163359e-11 5.08828580554427e-11 0.000399446677201876 5.36089466825331e-05 4.70609001774539e-05 1.37746225022913e-15 1.55935280201743e-08 1.5857608705197e-09 0.000536719894554111 0.000159175006239319 0.000403509236125403 1.8170294895816e-12 6.5417284168043e-09 1.06968288671285e-08 XM_589971.6 ZHX3 PREDICTED: Bos taurus zinc fingers and homeoboxes 3 (ZHX3), 0.0 9371 100.00 0.900190608213481 NM_015035.3 ZHX3 Homo sapiens zinc fingers and homeoboxes 3 (ZHX3), mRNA. 0.0 3575 75.93 0.857390400277248 TCONS_00046128_5 sp|Q9H4I2|ZHX3_HUMAN ZHX3_HUMAN Zinc fingers and homeoboxes protein 3; 0.0 1603 82.22 0.998940677966102 3 coding 0 0 0 0 -0.0357619161474555 0.788762670476796 0.0533358132947552 0.471987566343335 CAGCCGAGCCGAGAGGGGCCGAGCGGAGCCGAGCGCCTCCGAGTGCGGCCGGGCCGAGCCGAGCGGCCCGGAGTCGGTTGGTGCAGCTGCGTCCCCGCCGCCCAGCCGTCCGCGGCTCCGGCGTCGCCGCCGCCTCCGCCTCCGCGCGGTCTGCGCCGGCCGGCCAGCCGGTCGCTCGCCAGCCGGGAGGGAGGACTGGAGCGCGCGGAGAGCGGCCCGACCGCGGGCGCCGCCGCCGCCACCGCTGCCAGGACTGGATTGCAGCTGCAGAGGCAACAACTGAACCTTTAAAGATGCATACAGGGCTGCACAAAGAGAAGAGAGAAACTGGAGAAACCAATGAAGTGAGGAGAAAGTTTAACAGGGAAAACCTGCTTTCTGCCAACAACTGAAGAAGCCCTCGGAAGCTGCTCCTTTGGGCCTCACGGAGCAGCTGGAAGCCGTGCTGTGAGACCCCCAGCGGGAGGAGCTGTCGCCCGCTGATCACCCAGCACGACGGTCGTCATGGCCAGCAAGAGGAAGTCCACCACCCCGTGCATGATCCCCGTGAAGACCGTGGTGCTGCCCGGCTCCAGCGCTGAGGCCCCACCCGCAGAGCCCGGGCCCGAGGGGCCCCCCCAGGAGCCGCCCCCGGAAGCGCCTGCCACCAGCACCGAGGCCACCCAGGGCGCCAGTGGTCCCGATGTCCCCTCGCTGGCTAATGGGCACCGGGGCACCTTGGATGGCTACGCATATGCCTGTAAATACTGTGACTTCAGATCCCAGGACATAACCCAGTTTGTGGGACATCTGAGCTCAGAGCACACAGACTTTAACAAAGACCCAAGCTTTGTATGCACTGAATGCAGCTTTCTGGCAAAAACTCCCGAGGGGCTTTCTCTGCACAACGCCAAGTGTCACTCAGGGGAAGCCAACTTTGTGTGGAATGTGACCAAGCCAGACAATCACGTGGTTGTGGAACAGAGTGTCCCCGAGGGTGGCAGCCCTCCTGACCTGTCAGGGGAGCCAAACGTGGAGGGGATGGATGGACAGGCGGAAATCATCATCACCAAGACTCCAATCATGAAGATAATGAAAGGCAAAGCTGAAGCCAAAAAGATTCACACGCTCAAGGAGAATGTGCCCAACCAGCCCACTGGAGATGCCTTACCAAACCCTCCAGCTGGGGACACGGAAGTGAAAGAGGGGGACCATGCCTCTGTCAATGGGGCGGCCCCCTCCAGCCAGGCCTCAACCAACCCTGCAAAGCCCCCCCACTCGGCCAATGGCCCCCTGCTGGGGACGGTGCCGGTGCTGCCCGCGGGCATCGCCCAGCTCCTCTCCCTGCAGCAGCCACCCCCGCAGGCCCAGCAGCCCCTCCCCACCGCCAGGTCCCTCCCCAAAGTGATGATCCCGCTGAGCAGCATTCCCACGTACAACGCGGCCATGGACTCCAACAGCTTTCTGAAGAACTCCTTCCACAAGTTCCCCTACCCGACCAAAGCCGAGCTCTGCTATTTGACTGTGGTCACCAAGTACCCGGAGGAACAGCTCAAGATCTGGTTCACCGCCCAGAGGCTGAAGCAGGGCATCAGCTGGTCCCCGGAGGAGATTGAGGATGCCCGGAAAAAGATGTTCAACACCGTCATCCAGTCGGTGCCCCAGCCCACCATCACGGTCCTCAACACCCCCCTGGTTGCCAGCAGCGGCAACGTCCAGCACCTCATCCAGGCCGCTCTGCCCGGGCACGTGGTGGGGCAGCCGGAGGGCACGGCGGGGGGACTTCTGGTCACTCAGCCTCTGATGGCCAACGGGCTGCAGGCCCCCAGCTCCGCTCTCCCCCTGGCAGTCACCTCTGTCCCCAAGCCGCCCGCTGTGGCGCCCATTAACACCGTGTGTTCAAATACGACGTCAGCCGTGAAGGTGGTGAACGCCGCCCAGTCCCTTCTCACAGCCTGCCCCAGCATCACCTCCCAAGCCTTCCTTGATGCCAGCATCTACAAAAACAAGAAGTCTCACGAACAGCTGTCAGCTCTGAAAGGGAGCTTCTGCCGGAACCAGTTCCCAGGGCAGAGTGAAGTGGAGCACCTGACCAAAGTGACGGGCCTCAGCGCCCGGGAGGTGCGCAAGTGGTTCAGCGACCGCAGGTACCACTGCCGGAACCTCAAGGGTGCCAGGGCTGCACTCTCCGGGGAGCACGGCAGCCTGCTCGTCGACCCTGTGCCCGAGGCGCCCTTCTCCCCGCCGTGCAAGGCCCCCGAGGTGACCTGCCTCCCCACGGCGGCCACCCTGGCCACCCCCCCTTCTGCCAAGCGACAGTCCTGGCACCAGACCCCCGACTTCACACCAACCAAATACAAGGAGCGGGCCCCTGAGCAGCTCAGAGCCCTGGAGAGCAGTTTTGCACAAAACCCGCTTCCCCTGGACGAGGAACTGGACCGCCTGAGGACCGAGACCAAAATGACCCGCAGGGAGATTGATGGCTGGTTTTCAGAGAGACGGAAAAAAGTGAGTGCCGAGGAGGCCAAGAAGGCCGAGGAGGGGGCTTCTCCAGGGGAGGAGGAGGCCGCGGAGACCGAGGGGGAGGAGGGCTTAGCCGGGGAAAACGGCTCCCCAGAAGTGCCCGGTGGCCACACGCTGGCTGAACGCAAAGTCAGCCCCATCAAAATCAACCTCAAGAACCTGCGGGTGACAGAGGCCAATGGCAGGGGCGAGCTCGTGGGGCTGGGCATCTGCGAGCCTGAGGACGAGGCGCCTGGCAAGCTGGCGGAGCAGCCACCGGGCAAGGCGGGCTGCAAGAAGACGGCTCAGCAGCGGCACCTGCTGCGGCAGCTCTTCGTGCAGACACAGTGGCCCAGCACCCAGGACTACGGCTCCATCGTGGCCCAGACAGGCCTGCCGCGGCCCGAGGTGGTGCGCTGGTTTGGGGACAGCCGGTACGCCCTGAAGAACGGCCAGCTCAAGTGGTACGAAGACTACAAGAGGGGCAACTTCCCTCCCGGGCTGCTAGTCATCGCGCCCAGCAACCGGGAGCTGCTGCAGGACTATTACGTGACTCACAAGATGCTGTACGAGCAGGACCTGCAGAGCCTCTGCGACAAGACCCAGATGAGCGCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAGTTGGGCGAGGAGACCCGGGCTGTGGCCGACACGGGCAGTGAGGGCCAGGGCCCCTGCGCTGGCGACCCTGCAGCCCTTCACAAAGGGCTGGGTGACGCCTATGTGGAGGTGTCTGAAAACAGCGAGTCGTGGGAGCCCAGCGCCCCTGAGGCCAGCGCAGAGCCCTTTGACACGCAGAGTCCCCAGGCTGGACCTCAGCTGGAAACAGACTGAATGGGAACTGATGGCTATGAAGGACCGGCCAGCCTTGGGAGGCCGCTGCCGCTTGGAAGGGCCCAGCCCCTCTCTGCTGCCACAGGCCGAGGCCGCACCAGCCCCCGGCCCGCACAGGCCTCCACGCGGCCAAGCCCGCCGCCATCCAACCTGCCACCGCTCGCGAGCGGGGAGACGCGTCTGCCAGTTCTCCTGCCCATAATGTAGGACCTCTCCTTTGCCTTCCAGTGAATAAATAGTTCAGATTTCATATTCATAGACACAGAATCAAGTTTTTAACATATAAACTTGCCTATACACGTTTAGTAAAATGTCAGATTGCAGACACTTTTATTACATAGAAACTCTGGTTAGCAGTCCATGGTCTCTTACATCATCTCTGGAAACGCCCTGTGTCTGTTCTCTGAAGATCGCTGGGCCGCGCCTGCCTACACCTTCCACGGTCAGGCTGGGGTCACCACACCTGCAACCGCGGGCCTCCTTTGCAGTCCTCGAGGAAGGCAGCGCCTTTGAAGAGACCTGGGCCCTTTCAGCGGTGACCGGCAAACTGCACAGTGGGCTCGCCTCGCCTCGCCTCCTGGGATGATCACTGCGGAGCCCGTGTTCCCGGCGGTTTAAAAAACAGAGCCGGTATGTGGTTAGTGTCTGATGCTCTCAATCTCGTAAGCTGTTACAGCAGCTCTGCTTTTTCACAGAGTCTGACTCATGGACAGAACTCTTCAGTGATCAGATAGACTAAAGAGACACCTGTCAAGCCCAATGTCCTGACCTGTGTGCCGCTTTTTTTTTTCAGTCTAGACATGTTTAGAGAGGAAAATTGACAAGAGAAACAGGGATGGGCGATGGGAGTGAAGGCCACAGCCGCTGGGGGGCTTCCACAGCCCTCTGTTGACACTCACTCCACAGCTGCCTCTGGTTTGGGAAGGAAGACCCAGGCTCAACCTGTCAGAGCAAGAACTGAGTGGCTCGGGGACCTCTTGGAACCATCAGAGCCAGGGTGGTCCTCAGCACAGAGACCTGCGTGTGGGGTTCCCGATAAAGTTCGAGTCCTGGCCCCACGCCTGGGGCCTGGCTGGTGTGCTGGACTTTGCTGGACAGGTCCTTGTGAGGTTTTAAAGTTCTGTATTTATATCCCCGAACTTGAAAACACGATCTTTATGTTAGCTGAACTGTCATATATCTGCTTTTTTAATTGAGAAAAGCCACAGGAAGAGGTGCCTTTGTAACACTGAGAAACTTGCCTACAAAGCTGTGCTCAGCGGTAAATCACTGTATCCCCAAGACCAGCCACTCTGCAAGCAGCAGGTAAAGAGTGAAGCTCCCAGAAACCCCCTGCTGCCCAGAGCACCAAGGCCTGGGTGCTCCTCCTGGGCCGAGGCCGGTGGGCAGCTTCAGGAGACCCCAGAGGGAGGGCAGGGGCTGTAGTGAGAAATACTAGGGAGTGGGGTAGCCACGGCCCTCCTCCCCACCCGCCCCCAGAACCAGACCAGGCAGGCACCGCACGGGCTTGGCTCCCAGCATGGAGGTGGTGGTCGCCCCTTCTGCCTCCAGGAGAGACTTTTCTGTGGAAACCAAAAGCCCCAGAGCCACTGTTCCTCCCAAGTGTCTCTTCCCGCTTGCCCGTCCCATGAGGGACCACCTCTCCTTTGATAAACAGGTGGCATGTGAGGACTCGGCGTGCTCTGCAGCCTGTTTTTGTGTCATTTCCATGTTGGGTGTGAAGCTACTTAGCCCCAAAGCCTCTGTGGAGAATTGCCAAGAATGGCGATTGGGGTTGCCTTCTATCAGAGAACAGACGCCTGGAACTTTTCCTGTAGTGTTTATGTACGTGCAGATTAACTTATATATATCCATATGCAGTAGATACTCAGTTGACACTTTACTGGTGACGTGTACGCCTCACGTGTACACGAGACCGTGGTGGCACGTGGATGCTGCGGGTGGGCGGGGCCGCCGCGTGAAGCCAACTCCAGTGGCTGTGTCCCAGAGTCCTGTGTGCCCCAGCCAAGGGCTGTCTCTTCTGAGAGGATTTTCTTTTCTTTTGTATTCACATGTCATTAACAACCCAAACAGCAAAGCAGAGAAAATAAATTACATGGTGGACAAGTTCATGGAAGACACAGTGACCCCGCCTCAGCACCAGCTGGTCCTTAAAAGGTGGGAAACTCACAGCGCGGCCTGCGGGCAGGTCTTCTCACAGACGGGGGCCCTGCCTGACAGCCAGGGTGCGCCGCCCCCCACCACCCCCCAAGCAGTGAGACCACCCAAGCTGGCCAGACTCTCTTTCCTCTGCTCTTGGATCTGAGTGACTTAGGTGGGGGCTTGGGCCGCATGCTTGAAGGAGACAGAGATGGCTGGGTCATCAAACGGGTGTCTAAAGATACCTGGGGCCCTGGAGGCGAAAGCAGGAACACTGCCCACTGGGCAGAGAC EMBV3_04332 GTTAGAAAATGGAGTCTAAATACCTACAAGGAAGAATTTGGCTATAATGCAGATACCCAG Variant GeneID:507386|ARFIP1:NM_001083650:11_cdna 618^839 4 EMBV3_01672 GeneID:507386 17 GENE ARFIP1 MGC151527 ADP-ribosylation factor interacting protein 1 EMBV3_03593 CGCTCTATCTCCAACTGAGTAACAGCCAATAAAGGCCCTCTGAAGACCAGAAGCACATCC Gene GeneID:538667|DIRAS2:XM_002689844:21_cdna UTR3_Alt 1 NULL GeneID:538667 8 GENE DIRAS2 NULL DIRAS family, GTP-binding RAS-like 2 EMBV3_12146 ATCTGGCCTGTTCTGGGGGATCCAGGTGGTGTTACATGTCCATTTCATGCTTTGGGGGCT Gene GeneID:783259|LOC783259:XM_002686467:510_cdna Constitutive 0 NULL GeneID:783259 3 GENE LOC783259 NULL hypothetical LOC783259 EMBV3_37183 CAGTTAACAGTGTCCTGGGAGTGAAGCCAGACAGAAGCTTGGGCATCCTCAATGCCAACT Gene GeneID:100271839|C23H6orf141:NM_001145653:182_cdna Constitutive 0 NULL GeneID:100271839 23 GENE C23H6orf141 NULL chromosome 6 open reading frame 141 ortholog EMBV3_14635 TTGGGCATCTATATTCATCATAAGAGCACACACTTTGCAGGCTATGTCACCCAAAGGAAC Gene BVT0101_016846 - 0 NULL GK000027.2:23905300-23982027 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156180 TCONS_00156182 TCONS_00156181 1 XLOC_094933 Coding TCONS_00156181 XLOC_094933 Coding Coding LOC782395 27:23980049-24104604 = TSS116699 5699 1 TCONS_00156181_4 1026 4 0.954276859835894 4.89226542778968e-08 0.00100191049224487 0.000515506091692507 4.70054013186503e-05 0.000349276049970133 0.000161615601539985 0.000117836656928434 0.00020969865073559 0.000166258444451889 0.000378832138124945 2.63020958261999e-05 0.000478138210047092 0.000326340056366028 0.000349223642879216 2.56220053341997e-05 0.0021467726715021 0.000206285736615779 0.000366724208163336 0.000175835720222676 0.000256060793862577 3.68386764756939e-05 4.65919845146111e-05 0.000325346282807831 0.000861016953335159 6.97576069746949e-05 0.000105679149979011 5.13984224107717e-12 0.000209893276272875 9.93766134993932e-06 0.000605645398402146 XM_003587959.2 MFHAS1 PREDICTED: Bos taurus malignant fibrous histiocytoma amplified sequence 1 (MFHAS1), mRNA. 0.0 1.002e+04 100.00 0.974556939814002 NM_004225.2 MFHAS1 Homo sapiens malignant fibrous histiocytoma amplified sequence 1 (MFHAS1), mRNA. 0.0 4662 87.45 0.658361115985261 TCONS_00156181_4 sp|Q9Y4C4|MFHA1_HUMAN MFHA1_HUMAN Malignant fibrous histiocytoma-amplified sequence 1; 0.0 1859 94.32 0.976608187134503 6 coding 0 0 0 0 -2.91170218344908 0.0253874040152508 -0.00567268090961356 0.9088032883389 ATGATGCCCGTGGCGGAGCCGGGCGCCACCGTCCTCGTGGAGCTCGCGCAGGTTAAGATGATGCGGGCCGCGGGGCCGCGGCGGCGAGGCCCGGCCAACATCGGGGACATTGAGGTGCTGAACCTGGGGAACAACGGCCTGGAGGAGGTGCCCGACGGGCTGGGCTCGGCGCTGGGCAGCCTCCGTGTCCTGGTCCTGCGCCGGAACCGCTTTGCCCAGCTGCCCCAGGCAGTGGCCGAGCTGGGACACCACCTCACGGAGCTGGACGTGAGCCACAACCGGCTGAGCGTCCTGGGCGCCGAGGCGGTGGGCGCCCTGCGCGAGCTGCGGAAGCTCAACCTCAGCCACAACCAGCTCCCTGCCCTGCCAGCCCAGCTGGGTGCGCTGGTCCACCTGGAAGAGCTGGACGTCAGCTTCAACCGGCTGGCGCACCTGCCCGACTCCTTCGCCGGCCTCTCTCGCCTGCGCACCCTCGACGTGGACCATAACCAGCTCACGGCTTTTCCCCGGCAGCTCCTGCAGCTGGTGGCCCTGGAGGAGCTGGACGTGTCCAGCAACCGGCTGCGGGGCCTTCCCGAGGATATCAGTGCCCTGCGTGCCCTCAAGATCCTCTGGCTGAGTGGGGCTGAGCTTGGCACCCTGCCGAGCGGTTTCTGCGAGCTGGCCAGCCTGGAGAGCCTCATGCTGGACAACAACGGGCTTCGGGCTCTGCCCGCCCAGTTCAGCCGCCTGCAGCGACTCAAAATGCTCAATCTCTCCTCCAACCTCCTGGAGGAGTTCCCGGCCGCCCTGCTGCCCCTGGCTGGCCTGGAGGAGCTCTACCTTAGTCGCAACCAGCTCACCTCGGTGCCATGCCTGATCTCGGGCCTGGGCCGTCTTCTCACCCTGTGGCTGGATAACAACCGGATCCGCTACCTGCCCGATTCCATCGTCGAGCTCACCGGCCTGGAGGAGCTTGTCCTGCAGGGGAACCAGATTGCCGTGCTGCCAGACAACTTTGGCCAGCTCTCCCGCGTGGGCCTGTGGAAGATCAAGGACAACCCTCTGATCCAGCCCCCCTACGAGGTCTGTATGAAGGGGATCCCGTACATCGCCGCCTACCAGAAGGAGCTGGCTCATTCCCAGCCGGCGGTCCAGCCGCGCCTCAAACTGCTTCTGATGGGTCAGAAGGCGGCAGGAAAGACCCTTCTCCGGCACTGCCTCACTGAGGACAGAGTGGAGGGGAAGCTTGGAGGAGGGGGCCAGGAGAAGACCTACCCGCCTTCACCGCCTCCCGGGAGCAAGGGCATCGAGGTGACCAGCTGGACGGCGGATGCGTCCCGGGGCCTGCGGTTCATCGTGTATGACCTAGCCGGGGATGAACGCTACGAGGTGATCCAGCCCTTCTTCCTCTCCCCAGGGGCCCTGTACGTGCTGGTGGTGAACTTGGCCACCTACGAGCCGCTCCGCTTTCCCACCACCGTGGGCTCTTTCTTGCATCGGGTGGGGGCCCGGGTGCCCCACGCCGTGGTGTGCATCGTGGGCACCCACGCTGACCTGTGCGGGGAGCAGGAGCTGGAGGAGAAGTGTCTGGACATCCACCGCCAGATCGCCCTGCAGGAGAAGCACGACGCCGAGGGGCTGAGCCGTCTGGCCCAGGTGGTGGACGAGGCGCTGGCCCGGGACTTTGAGCTCCGCTCCGCCAGCCCTCACGCGGCCTACTACGGGGTGTCGGACAAGAACCTTCGGCGGCGCAAGGCCCACTTCCAGTACCTGCTCAACCACCGGCTGCAGATCCTCTCGCCAGTGCTGCCGGTCAGCTGCCGGGACCCGCGCCAGTTACAGCGCCTGCGCGACAAACTGCTCTCTGTGGCCGAGCACCGCGAAATCTTCCCCAACTTACACCGCGTGCTGCCGCGGTCCTGGCAGGTGCTGGAGGAGCTGCACTTTCAGCCCCCGCAGGCGCAGCGGCTCTGGCTCAGCTGGTGGGACTCGGCTCGGCTGGGGCTGCAGGCCGGGCTGACCGAGGACCGGCTGCAGAGCGCCCTCTCCTACCTGCACGAGAGCGGCAAGCTGCTGTACTTCGAGGACAGCCCCGCCCTCAAGGAGCACGTCTTCCACAACCTTTCCCGCCTCATCGACATCCTCAACGTCTTCTTCCAGAGGGACCCTTCCTTGCTACTGCACAAGCTGCTCCTGGGGACCAGCGGCGAGGCCGAGGCCGAGGGCCGGGCCGAAAGCTCCCCGCTGATGGCGCCGCCCGCCCCGAGCCAGGACGCGCTTCGGGCCACCCAGCTCCATCACTACGTGGAGGGCTTTCTGCTGCACGGGCTCCTGCCAGCCCACGTCATCCGGTTGCTGCTGAAGCCTCACGTCCAAGCTCAGCAGGACCTGCAGCTGCTGCTGGAGCTGCTGGAGAAGATGGGACTCTGTTATTGCCTCAACAAAGCCAAGGGCAAGCCCCTGAATGGGTCCACGGCGTGGTACAAGTTCCCCTGCTACGTGCAGAACGAGGTGCCGCATGCGGAAGCCTGGATTAACGGGACCAACCTGGCCGGGCAGTCCTTTGTGGCTGAGCAGCTGCAGATTGAATACAGTTTCCCCTTCACCTTTCCACCCGGCTTGTTCGCCCGCTACAGCGTCCAGATCAACAACCACGTGGTGCACAGGTCGGATGGCAAACTTCAGATCTTCGCCTACAGGGGGAAAGTCCCGGTGGTGGTGAGCTACAGACCTGCCAAGGGGGTCCTGCAGCCGGACACCCTGTCCATTGCCAGCCACGCATCCTTACCGAACATATGGACGGCATGGCAAGCCATAACCCCCTTGGTAGAGGAACTGAATGTCCTACTTCAGGAATGGCCTGGACTGCACTACACCGTGCACATTCTCTGTTCTAAGTGCCTTAAGAGAGGGTCGCCTAATCCACACGCTTTCCCAGGGGAGTTGCTGAGTCAGCCCAGACCAGAAGGAGTGGCAGAGATCATCTGCCCCAAGAACGGCAGCGAGCGAGTGAATGTTGCCTTGGTTTACCCACCCACACCAACTGTGATCAGCCCGTGTTCCAAGAAGAACGCTGGGGAAAAGCACAGAAACCAGTGACTTCTACGGCTGTGGGATTTCCATGGAGAAAATAGCATCAGAATGCACCTGGACCATCTTCTGTACCTGGCAAACCCTCACACTCCCAGGCGTGTTCTGTGAATTCGCGTGCATGTGTGTTCAGGGTGTTTTCGTGCGAGGGAGCACACCTAGCCTGTAGATGAGGCAGGGAGGGTGCAGGGGGGGAGAAGGACGGGAGAGACTATGGAGCAAATGTTTGACAACCTGAACCTCAGAACTGTGATCCTCCAAGGAGAGCGCTACTTGAAGAAAAGAAAAAATAATAAAGTCGAATGGCTTCTCAGGGATTTTTTTTTTTTTTTTTCTGTGCACATATAAGCCATAATTCCAGTACAGGTGGCAGTATTCAGAGCACTCAGATTTCAGTTCTGTTAAATGTGAAAGAGGGATCGACTGACCATTCATTGCTGTTCCATAACTAGTGTAAAATATGTATATGTTTATCTTTATTTTTATAATACACAAATACATTTAAATTTATACAGTTTGAAGCTTCTAGCATTAGTTGACACTGGGTGCAATATTCTGATGAGAACTGTGCCAACACGGGGCTGATTTCTTACTTTAGCATCGGACGTGTTGTTTATTCTTTAAGCCTTCGCAGATTTAAAAAAGAAAAGATACCTGTCTCTTTGCTCATGGCTTAAGTGTTGGTTCATAGAGGTTGACAATAATCATCAAGAACCTTAAACATGCATTTCAGGCAATAGCCCCTCCTCACCTTTTCAGTAAAGGTCCCTGGTCACTGGGTGATAGTCTGATGGAGGCCTGGTGATTAAGATTCTTCAGGGGAGGGGGATTAAGGGATCCACATATCCAAGGAAAAGTGGAGTCTTGCAATAGCTTAGATAGTCAGGCGTCAGTTCTGAAGCATGCAAAGAGCTCTGCTAATAGGTCCTGTTCCCACCCCCCACTGCCCCCTAGAACAGAGTCTGTGAAATTTAGCAGAGCTCTCTGAAAGCTGGTATCAGACCCTAAGATAGTGAGTTGCCTAATTGGAGAGCACAAGCCCACGTTGGTTATTTATAAATACAGAACCTCTGATTGGATGGTCTACTGCCACAAACTAGTAAAACCCTGGTTGTAAAATCTCCATGACGTAAAACCTAAAAAGCCAACCAACCAAACTGCTCTCTCCTCCTCCTCGGGGCCAAACAGCATCCACTGCAATAGTAACACGTTCTTTGAAGAGTGTGCACGCCTCTGTTTACATCTGCCGCCTCTGCATGTGGATTGAAAAATGTGTGAAACTGTTTCTTTCCAGGGTAAGGCAAGAAAAACTAGTCAGTGGTATTATTCGTTTACTTCTATAAAGTATTGTCTCTTGGAATGCCACAGTATACAATGTCTCCACATATTTAAAAAACAAAATAACAAAGAAGCAAGTGGCTGCATTGCAACAACAACAAAAAAAATACACAAATCAATTTCTGTAGACTGTTTTGTACCCCAGGAATTAACTTTATGAACTCCAGAACCTCCAAACAAGCATGATTTCTTACAATCGTAAAATCAAATGGGATCAGACTAGTTCCGCATTTTAACAGTCGAATATGACACCTCCAATTTGCAGTTTAATTTTCTTTTGGAACAGTCACAAGATTCACCTTGTTAATCCTTCTGTCACAGTTCTCCTGTGTGTGTGTGCATGTGTGTGTAAGTGTAAACTGAATGGTAACATTTAATTGCTTTACGGACCACTAAATTGTTGGGCATCAAAGTTTTCCAATTGGCAGGAGACAGTTCTTCAACTGTCAAATTAACCGACTTTGACCAAAAAAAGGCTTGGTAAAGTGACTTCAGGCTAACTCCCCAGGGGACTGTATTAACTGAAGAAAAAAAAAAAAATGTTCCTTTGGGTGACATAGCCTGCAAAGTGTGTGCTCTTATGATGAATATAGATGCCCACATTCTTAATAACTGCTCTTTTTGGATCAGTGATGCTGTATGCTGTCATCTGACCTTAGAGAAGCAGTGTAAGAAGAAAGCTTGGTGTCACATGTATTTGAGCAAAAAAAAGTCATCCTGATAGAGGGTCATGTGACCAAAAGCAGCTCCAGAAAAGCTTGAGAACTCGCGTTGGGGCAGAGGGGAAGGTTGGAGATACAGAAAACACACTGCTCTATAGGAATTTTCTTCATCTATGCAGGAAATTCCATTCTCTCTTTCAACACCTGGGAAGACTCAGCTGGGGAGGCTGACTGATGCACTAAGCACAAAGGGGGATCTTCTCCAACTAAGTCGTCCCTGCCTTGCAAACAGACGCCCTCCACGTTTGTTATGGTTTCTATTCCTGCATCTTGTGGTATCAAAACCACTTCCTGGAATTGTAAACGCGCTGCCAGAATAAATGTTTTTTCCCCCTTCCAAGAAAAAAACCGCCAGTGCTCATATTTGACACTTGTGCACTGGACTCTTTTTGAATGAATAAAATGGAAAGGGTTTGGTGTCAATTCTGATGGAGTGTGTGTTCTTTTTTCATGCCACAGTTTGTGCGTTGTAATTGTGGTTTCCTATTTAATTGCCATAACTGGGCAGAATTTAAAAAAAAATTCAAAAAAGTTTAATAAAAAATACAAAGAAATGATGAAGCAGTT EMBV3_22995 CCCAGAAACTCGAAAACGGGACCTGCCATTCTCCCTTGTATTGCTAAACTCTTGTCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35316 GGACACAAGAAAGCCTTGCATCCTAAGCGGATAACAGGGAGACTCGGCAGACGTGAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09579 GTGATAAAAGCAGCTCCCAAACAACATGCTAAACGAGGCGCTCCGAGAGTGTAACCTCAG Gene GeneID:530102|COL6A6:XM_002685172:6_cdna Constitutive 0 NULL GeneID:530102 1 GENE COL6A6 NULL collagen, type VI, alpha 6 EMBV3_29637 CTTCAGCTCGGAACCAACGCTGGAGGACATTCAGTGGAAGCCTGATGAGGAGCCTGGGCC Variant GeneID:614103|DCTPP1:NM_001038202:389_cdna 139^249 1 EMBV3_31952 GeneID:614103 25 GENE DCTPP1 MGC133613 RS21-C6 XTP3TPA dCTP pyrophosphatase 1 EMBV3_01407 CAAGAGGTAAGCACAGCCTTTGACCCCCACTCCTTCTACAACCTGTGTATGACCAGCTGT Gene GeneID:527939|UFSP1:XM_002698202:755_cdna Constitutive 0 NULL GeneID:527939 25 GENE UFSP1 NULL UFM1-specific peptidase 1 (non-functional) EMBV3_06457 TGGAGTGGCAAGTCACCACATCACAGTGTGTTTTCTCCTCTGAGAAGTATTCAGAAGGGA Gene BVV0102_320555 + 0 NULL GK000005.2:83986262-84096323 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192733 TCONS_00192732 TCONS_00192725 TCONS_00192734 TCONS_00192731 1 XLOC_117257 Coding TCONS_00192733 XLOC_117257 Coding Coding ITPR2 5:83983427-83990442 j TSS144166 4781 3 TCONS_00192733_6 79 0.0813637314369379 4 0.318933561448531 1.70490676670217e-05 9.86964282102191e-05 1.68641079124787e-21 6.7985869324224e-58 1.91672203704216e-36 6.37825809421656e-58 3.0552384255335e-05 3.48354250530903e-08 6.62117976101953e-13 0 0 0 3.922505971928e-06 2.41153699585268e-05 0.000159011182536738 0.000348366654671709 1.9540942818464e-25 0.000802054903019876 0.000179062873249044 1.03296547903548e-16 1.35744727536503e-05 7.13766884675516e-05 0.000172053921993531 0.000745165929927466 5.74171848198455e-05 8.84660046371784e-05 8.14652885346578e-79 6.58131571015128e-14 5.03029918736264e-09 0 NM_174369.2 ITPR2 Bos taurus inositol 1,4,5-trisphosphate receptor, type 2 (ITPR2), 0.0 726 99.75 0.0849194729136164 NM_002223.2 ITPR2 Homo sapiens inositol 1,4,5-trisphosphate receptor, type 2 (ITPR2), 0.0 2031 73.21 0.670780171512236 TCONS_00192733_2 sp|Q8WN96|ITPR2_BOVIN ITPR2_BOVIN Inositol 1,4,5-trisphosphate receptor type 2; 1e-42 150 100.00 0.986301369863014 0 noncoding 0 0 1 0 0.116416615486326 0.573324733289843 -0.00474106590539485 0.941007528092593 GAATGTGTTTTTCTCTGACTAACAACTACCAAAGAAACCAGCCGAAGGGCCAGATGAGATTTCGACAGAAGTGCCAAGGAGAAGAATTTGGACTGGTTTCCTCGGATGCGAGCCATGTCCCTTGTTAGCAGTGAAGGTGACAGCGAGCAAAATGAGGTTCGGAACCTGCAGGAGAAGCTGGAGTCAACCATGAGTCTGGTCAAACAGCTGTCCAGTCAGCTGGCAGAGCTCAAGGAGCAGATGACAGAACAAAGGAAGAATAAGCAGAGACTGGGCTTTCTCGGATCAAACACACCCCATGTGAATCATCACATGCCACCACACTGAAAAAAGAACTGAGACCGAGGGGAGTGAACAGTGCCTATTGTTGAAAAGTTAAAAACAACCAAGTGCCAAGATGTTGAGTGGTTTAGCTCTGAGAACAATTTTTAACTGTGTTTTCATGGTTGAGAAGACCAAACTTAAAATGCAGCCGCTAGAAAGCACACAGCACGCATTCTTAATGCAAAGTGAAGCCGCTTGCTCAAATGGACAGAGAGAAGAGGGGGGAGGCAGGGGGAAAGAGGTGCAGGGCAGAGAGAACTACCTTTGGCTGAATCGATAAGGGTCTGTTTTGTCTTTAATGCTCACTGAGACCTTTGTCATGGTTGACTGGAATGTCTTTCTTTTAATTATGGCATCTGAGTCAGTGATACAGGAAGTCATATTTTGGTGGCTAAGTTTTACTAAGGGAAATAACTAAAAAGATTCAAAATGAGAGCTGAAAAGAAAAAATGTTAATGCTTCCAAATCGTAGCCATCACGGGCAGTTTCCTTATTTATAACATGGAACACAATGGATTTATGGCCCTAGGAACTAGTGCTTTGGAGCCTATGTCCCTCAGCTGACAACACAACTGGAATATGCCTGCTTTCTCCCAGATTCAGAGGGACTCTTGTCAATACGGAGCACAAAAAGAGGCTTTCATATGACTTGTTAACATCATGTTTCAAATCATGTAGAGACTAAGACTATCAAAGATTTGGGAACAAAAAAGCTGACAGTAAGCCCCAGAGAAGAATTTTTTGAGAACGTATGTGTGCTATTGAAATACATTGAGATTAACAAATGAAAATGCTTAAAGGTGACAGGAAATACAGAGAAACTTACGATGGTGGCATTGCCTTTTATAAATAAGGAGTAAAAGCTATTTGATTCATGTTTGCTGTGCTTAAGAACTGAGTGGTTTTATTTATTCTATTCCTGCAGTTAGGGAAAAAATCCAAGAAATGTATTGAATACTCCAGAAAATGCAGCGTTTCAATTGCATATTTTAAACTCTATCAGTAAGAGCTTTGCAAAAGGTAAAAAGATAATAATCTCTTTCTCAAATTGTTTTTATGTTAAATTATGCAACCAGAATTTGTAGAGGGAGAAAATAACCTGCCATGCCTGTGTTAGTCTCAGAGACTATGCCTTTAGAATGCTAAAGCAAAATTCACATCCTGAAAGTGTTAGGAGAACCGCCATGTGGTGAGAGAGCAAGGCACTGACACCAGACTCTGGGAGGTGCTCAGCAAGCTGACCTTTTCTGGTTGCTGCCCCCAAAAGAACAAAATACCGCCTCTTAAGCTCTCGTGTCATTACCACCAAGGTTTAAGGTCTGGACAGGATTTGCTATGCCCCTTTTTAAAGCTTTTGGATTATTTGAATGTAGTTTAAGCTATTGGCTCCTAAAATTCTCTAATCACGGTCTAGGAAGATGATAAAGGATACCCATAACTATCCTTCTTCCACACCCCATTAAAATGTAGACTTGGAAGAAAGCTGTGGAAACCCAGAGCAGTGAATTTTTGAACTGAATCTGCCCCCCTCCAAATAATTCCCCAAGTTAAAAATTCCTCACTCTGATGTGATAGTATTTTTCTGGACCAGTCCTGAAGGATCACAATCAAGTGATACTCAGAAACTGAGCTATATGCAACACAGAGCCTAGGACCCAGTGGGCGTTCGGTGAATATATGAGGAATTCTACTGTCATTCAGTCCTAATGCTTCACTAAAACTTTAAACCGTATCACATTTTGATTTTTAAATGGCTTCACCAAAACTGAAGTAGACAAAGCAGCCATTTAAAAAAAAAAACACACGCACAAAATAAGGCCCTTTTTGTTATTAACAGTATTAGATGAGAAGTACCCTTTTAAAGCATTTTAACTAGGCAGGCAGAGAGTTTCACAGGCAGGGTAAAGTGGTAAATACTGGCTATATTGCAATGTCAGAACCTATCTCTGTTTAGCACAAACTAACATGTTTCTGATGGATGTCCCAGCATCAAGAAAAGAAATTAGTTTGTACAGATGAGAGCAACCTCTCAGATGAACTACCTACTTTTTTCTTACACATTTTTTTTAGGGAGAATGAGTCGTTGGATATGTACCTGCTATCAAGAAATGGCCTAACCTCTCCAACCACTGTGGAGTGGCAAGTCACCACATCACAGTGTGTTTTCTCCTCTGAGAAGTATTCAGAAGGGATTGCAACTAACCAGACTCTTATTTAATCAAAATTGAAATATTGCTCAGTTGTGTTTCTCTTCTTTCCTTCCTCAATACTTTGAGATTATTAAAGTAAAATAAACGAAAGCAAGCAAAAGAGGCAGCTTTCAGGCTATTAAATTCATGATGAAGCAGATAATCATGACATTCACTATAAATTTATATTTGTTTTATATATGTTTGTTAATGTAACTGGAATATTTGACCTAGACAAGTGTCAATTAACATTCTCATATTTATATAGTGATATTAAAATAAGTACAATCATCTTTGATTTTGATGTTAAGAGAAATGTTTTACTGTTTAGTTATTAAAACCCATATTGGCTTAAAAGTATCAGTTTCTGCGGAACATAATTTTTAATTTCAAAAGGATTTGATTCCCCTACATAGTCCACTCTGAAGCCCAAGAGTTTCATGCAGGTATGTTTTAAGACTATAATACTAAAAAATAAATTTTATACGTGTAAAATTAACATATTTTACCTTGTAAAAGTTTCTTTAGACAAGGGCTTATTTTCTTGCATACTGAAACTTTTTTATTGGTGATGAGGATGCATTTTCTAGTGGATTATTGATAAATCAGGAAGATATTCTGCTCAAGTCGGAACTGTTTGCTTTTTTCCATATTCTCAGCTCACAACTCGTTGTTGTGGTTGTTCTTTTTAGTTTATAGTTGTTTTATTTTATTAGAAGCAGTAATGCCGAAGGGTCCGCCCTTGTCCCCATGCCCCAGGGCTGAGAATAAGCAGAGAAATTGGGGATCTAGAGACTTGGGGAGGGAAAGTGCACGTTGGGACTTCACTGTGATTAGGGGAAGGGCTTCCCTGGTGCCTCAGTGGTGAAGATCCCACCTCCCCAAAGCAGGAGACTCGGATTTAATCCCTGGGGATGGAAGATCTCCAGGAGGAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGGAAATTCCATGAACAAAGGAGCCTGGCAGGCTACAGTCCAGGGGTCGCCAAAGGTCAGACACAACTGAGCTAGTAGTAACGTAGTATGATTAGGGGAAAGACAGAGTAAAGGGTAGACAGTAGGATGAACAGGGCTTACCCTCCAGGGACCCAGTAGACTGGGACATAAGTAAATATTGCACAGGTATAATGATTTAACAGATTACAATCTCAAGAGATAACCCTTAAACATGCAAAGAATAGGGCTTTGTGGAGATCATCCGTAAGAGGTGTGTTCTCTCCAGCGGTCCTTAAATCTTTACAGAATCACAAATCAGCATATTCTGACCCACAGACCTGTTCCGGGAAGCCCTGACACTCAATGCAGTGCTAAAAGGGGGTGCAGCAGGCATCTTAAACACAAGCACAGGTGCCCATAGGAACCAGAAAAGTGACCAGAATGAGTGCAGTTGTGAGGGGCACATGTGTGTAGGGAAGGGGAAACCTATGGGGAGCTTTCTTTTTTTTAGTTTATTTTATTGAAGTATAGTTGACTTACAATGTTATGTTAATTTCTGCTGTCCAGCAAAGTGAGTGTTATATATAAACGTACATTTTTTCATATTCTTTTCATCATGGTTTATCCCAGGATATTAAATATAGGTCTCTGTGCTGTACAGTAAGGCCTTGTTTATCCATTCTGTATATACTAGTTTGCGTCTGCTAATGTGGGGAGCTTTCTGTTTACAAATTTGACACATAATTCCACTCTGAAGAAAATGCCTGAGGCCAGTTGAGGCTCTCTAGTCATTGGTGGCTCAGCTGGTAAAGAATCCCAATGCAGGAGACCCTGGTTCAATTCCTGGGTTCGGAAGATCTCCTGGAGGAGGGCATGGCAACCTACTCCAGTATTCTTACCTAGAGAATCCCCCTAGACAGAGGAGCCTGGCAGGCTACAGTCCATGGGGTCGCAAAGAGTTGGACACGACTGAGCAGCTAAGCACAGTCACTCATGTGTTATCTTTAAAAGAATTGTTGGTAAATCTACACCATTTAGTAGAAGAAAGTACACTACACCAAAATGGAGCAGAGGAGCTAAAATGCATGTGCAAGTCAAGAAATCTGAAAACAAAGCCAGATTTCACCTCTGAACTGAGTGTTTCCACAGACTTGAGTAATGTATAAAAGTATCATACCAGTTTTTCTCATTTCACCAGAAGCCTTTTCTTCCCCTGTAGTAGAAGATTGCTATATTTGCCTCAAAAAGTATGATTCTAATGTATGTCAAGACCAGATAAGTATAACTTATAAATTATTATTA EMBV3_05892 TAATTAATCACCCAGGTGTTGTTGGAGGCTGTTGGCACTTCTCCCCATAAGGCACAAGGG Gene BVT0102_261484 - 1 EMBV3_14672 GK000005.2:72082471-72156270 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13199 GGCCCCCAGCCAGCGCCAGCATGCAGAACAGTGTCCAACGGATGTGTGAGTAAAATTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01270 AGTGGGTATCAAACTGGACACCGTGGAGCAGGACACAGGAGTGGGTATCAAACTGGACAA Gene GeneID:100140623|LOC100140623:XM_002697191:257_cdna Constitutive 1 NULL GeneID:100140623 23 GENE LOC100140623 NULL hypothetical protein LOC100140623 EMBV3_03096 GTCGTGCTGGTGATGGCCTACGGGAGCCTGGACTTAAAAGAGGAGATAGATATCCGACTG Variant GeneID:538459|C3H1orf43:NM_001015666:186_cdna 217^318 2 EMBV3_16188 GeneID:538459 3 GENE C3H1orf43 C1orf43 MGC140006 chromosome 1 open reading frame 43 ortholog EMBV3_19059 CCAGAAGCAGCCCTGCCACTTTTTGTCGCTATTTCCAAGTTGCGGAGAGAAGCCAATGTA Gene BVT0102_086173 - 0 NULL GK000008.2:16751228-16979526 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31047 TGAAGGTGAAGGGTTGGTGGAAAGACGGCAGAGAAAGCCAGGCCCTCAGATCCTTTCTAT Gene BVV0102_117924 + 0 NULL GK000019.2:8090024-8171382 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26962 GCCTTGAATCAATACGGGTAACAGGACCTGGTGGGAGTCCCTGTTTAGGAAGCGAAAGAA Gene GeneID:540646|LIN28B:XM_002707838:11_cdna Constitutive 0 NULL GeneID:540646 9 GENE LIN28B NULL lin-28 homolog B (C. elegans) EMBV3_13633 CCAGCTATCCATGACCTCACCTGGTTCCAGTACCACTCTCTGGATGTCATTGGGTTCCTA Gene GeneID:100140261|LOC100140261:XM_002688323:185_cdna Constitutive 0 NULL GeneID:100140261 6 GENE LOC100140261 NULL similar to UDP glucuronosyltransferase 2 family, polypeptide B4 EMBV3_06078 TCACCACGGGAGAGAATGCACACATCTTCCAGAGAACCACGAAGAAAGAGGTGAATCAGG Gene GeneID:521616|CACNG6:XM_002695376:210_cdna Constitutive 0 NULL GeneID:521616 18 GENE CACNG6 NULL calcium channel, voltage-dependent, gamma subunit 6 EMBV3_32208 AACTGTTGAACCTGTGCTGTAGAGCCTGGGAGCCACAACTGCTAAAGTCTGCACACCCTA Gene BVT0102_154744 - 1 EMBV3_42689 GK000019.2:10461302-10546156 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098675 1 XLOC_058919 NonCoding TCONS_00098675 XLOC_058919 NonCoding NonCoding - 19:10477429-10478086 - TSS73051 657 0.914764079147641 1 0 0.000372759973585998 0.00146826492903174 0.000366215287582069 4.21316942586815e-06 0 2.72226681216976e-05 8.87626686630579e-06 2.70079035290001e-05 0 0 0 0 7.86104075327159e-05 0.000365700742077832 0 0 0 0 0.000496616946747309 0.000109458534368122 0.000706950878726558 0 0 0 1.05456179159891e-05 0.000686316823623577 4.45901405778972e-05 0 0 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 7e-115 417 93.86 0.41400304414003 0 noncoding 0 0 0 0 -0.367937287511652 0.0579060248731922 0.000773433267066054 0.987171052354064 CTTAATCATGGCTAATTAGGATGCAATAGAAGATTGAGGCGGAGAAGGCAATGGCACCCCACTCCAGTATTCTTGCCTGGAAAATCCCACGGACAGAGCCTGGTAGGCTGCCGTCCATGGGGTCACTAAGAGTCAGACACAACTGAGGACTTCACTTTCACTTTTCACTTTCGTGCATTGGAGAAGGAAATGGCAACTCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCCTGTTACCTCAGTGTTCATAGCAGCATTATTTACAATAGCCAAGATATGTGAGCAACCTAAGTGCCCATCAACAGAGGAATAAATAAAGAAGATGTGGTAGGGCTTGCCTGGTGGCTCAGTGGTAGATAATCTGCCTGCGGATGCAGGAGACATGGTTTCAGGCCCTGGGGGGATCTCACATGCTGAAGAGGGACTAAGCCCGTGTGCCACAACTGTTGAACCTGTGCTGTAGAGCCTGGGAGCCACAACTGCTAAAGTCTGCACACCCTAGATCCTGTGCTCTGCAGCAAGAGAAGCCACTGCCCTGAGAAGCCTCCCACCTCAACAAAGAGCGGCCCCCTACTC TCONS_00092170 . 3' 14652 TCONS_00092170 . 3' 15308 EMBV3_06101 ACGGGGACAATCCAAAGGAACAGACACTCAACCCCCCAAAGCGCATGATTGCCGGAAAAA Gene GeneID:786913|ISL2:XM_002696627:158_cdna Constitutive 0 NULL GeneID:786913 21 GENE ISL2 NULL ISL LIM homeobox 2 EMBV3_34874 TATCATCTTCCCTCCTCTCACTTTCCTGCTCCCCGGCTCACCCTTTTTCCAGATCCAATC Gene BVV0102_194758 - 1 EMBV3_25791 GK000019.2:35015403-35024087 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34380 GTGATCATGAGAAACCAAGAGGTGATTCTGATTGTGTTCCACTTCTGGGGCCTCCTCCTG Gene BVV0102_154267 + 0 NULL GK000013.2:64043572-64050710 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045923 TCONS_00045922 TCONS_00045920 TCONS_00045921 TCONS_00045924 1 XLOC_026574 Coding TCONS_00045922 XLOC_026574 Coding Coding EIF2S2 13:64047693-64069333 j TSS33418 4413 1 TCONS_00045922_3 314 8 0.796432367484634 0.000435722698956895 0.00043278245282217 1.44144141663587e-08 0.000361198856295064 9.27102935297966e-12 9.89453739367921e-09 2.80464747305917e-17 1.55632082071555e-28 2.49839152923851e-07 1.61114599515009e-10 4.66190737918508e-21 1.25509463007154e-10 5.3957027513903e-05 1.47140740394718e-06 1.36276879699621e-11 0.00228162593941244 0.000960331985393223 0.0011429262092557 9.73461653228877e-14 0.000199967366451216 1.20634200757197e-21 0.000514210860502904 0.000440094008846567 0.00102521390473071 8.63877557372237e-28 1.08426865126643e-07 3.85370433290407e-22 0.000244820482936979 8.54968183261263e-10 0.00029404862230718 NM_001015621.1 EIF2S2 Bos taurus eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA. 0.0 2311 95.56 0.308633582596873 NM_003908.3 EIF2S2 Homo sapiens eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA. 0.0 2455 80.47 0.57126671198731 TCONS_00045922_3 sp|Q5E9D0|IF2B_BOVIN IF2B_BOVIN Eukaryotic translation initiation factor 2 subunit 2; 0.0 578 93.99 0.996815286624204 1 coding 1 0 1 1 -0.0212582903752934 0.89260148800276 -0.0324414186024266 0.746977878348463 ACGTTTGGGAGGAGAGGGCGGGGTGTCGTTCCCTTTCGCTGATGCAAGAGCCTAGTGCGGTGGTGGGAGAAGTGTCGGCAGGAGCAGCGCTGAAGCCGGGGCCTGGGGCTGACCCGTCAGAGTTTCCGTCCGTGCCGAGCCCACTCGAGCCGCAGCCATGTCCGGGGACGAGATGATTTTTGATCCTACTATGAGCAAGAAGAAAAAGAAGAAGAAGAAGCCTTTTATGTTAGATGAGGAAGGGGATGCCCAGACAGAAGAAACCCAGCCCTCAGAAACAAAAGAAGTGGAGCCAGAGCCAACTGAGGACAAAGATGTAGAAGCTGATGAAGAAGACAGTAGGAAAAAAGATGCTTCTGATGATCTAGATGATTTGAATTTCTTTAATCAGAAGAAAAAGAAGAAAAAATCAAAAAAGATATTTGATATTGATGAAGCTGAAGAAGGTATAAAGGACCTTAAGATTGAAAGTGATGTTCAGGAACCAGCTGAACCAGAGGAAGATCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAGGTTGTCAAGTTCCCTGATGAGGATGAAGTACTAGAGAAAGATGAAGCTTTAGAAGATGAAGACAGCAAAAAAGATGATGGTATCTCATTCAGTAACCAGACAGGCCCTGCTTGGGCAGGCTCAGAAAGAGACTACACATATGAAGAGCTACTGAATCGAGTGTTCAACATCATGAGGGAAAAGAATCCAGATATGGTGGCTGGAGAGAAGAGGAAATTTGTCATGAAACCACCACAGGTTGTTCGAGTAGGAACCAAGAAAACTTCTTTTGTCAACTTTACAGACATCTGTAAACTTGGTTCTATAGATGGTAATAATCAACTTGTAATTAAAGGAAGATTCCAACAGAAACAGATAGAAAATGTTTTGAGAAGATATATCAAGGAATACGTCACCTGTCACACGTGCCGATCACCAGACACAATCCTGCAAAAGGACACCCGCCTCTATTTCTTACAGTGCGAAACTTGTCATTCTCGATGCTCTGTTGCCAGCATCAAAACTGGCTTCCAGGCTGTCACAGGCAAGCGAGCACAGCTCCGTGCCAAAGCTAACTAATTTGCTAATCACCACTGATTTTGCAAAGTGTGTTGTGGAGATTTGGCTGGACAGGTTTACCATCAGAGTGGATATACCACTGTATTAAAAACAAGATAGAAAAGCTGCCAAGTTCTTTGGCGTGTGGCTGGTTGGTCTGAAATTCTTGCAAGATGCCGTTGCTGAAGCTGTTGACATACTCATTGCCTACTTTAACAACTGTCAGAGAAACATGATGGGGTAAGGTGGTGCTTTTTTAAAATCGTTCATAGACTTCTGTAAAATGCAAGATAAATTAAAGTTATTATAACAGTGATTCTTTCAATTTGGTTTGTCCTTCAGTTTTCTTTTCTATTAAAAAATTATGCTTAATGAATTCAGCACAACAGTTTGTGCCTGGGCAGCTCTGGTGAGGTCTCTCTATGCTTGTCCTGAGAATCTTAAGCTGGGTAGTCATTTTCCTTCTCAGTTTCTTGGGATGCCTGAAGTAGACATAGCTTCACATGATGGTTGGAACATGAAATCTGGGAGGACAGCCTGTTTTTGGTGTCCAGAAAACAATTATATAGACTTGAATTCTTTTTCATTATGTGGGGATTGTTGCCACTACCTCACAGCTGAGTCCTCCATCTGTTACCATATGAGGAAATACAGGGTGCTAAGTACCTTCCTTAGAATTTTCCTCCTTATTGGCCACTAAGAGAATCTTAGAGATACAGCCTTTGAGTATGTCTTAGAACTTGCTGGCACACCAAGAATAACCCTAGTCAGGCATCTGTTGGTGAGAAAGTGGTGTGGCTTATGCAGTAGAGAGAACTCTTGACAGTCCAAACCATGATGCTAGAGGACACTTTTCTTTTTCCTCAACTTGAGTTCTGGATTTGAAAAATGGCCCACCACAAATGTTTTTTTTCTATTTTCTGTATTAAAGTCGATTTTGAATGTGATCATGAGAAACCAAGAGGTGATTCTGATTGTGTTCCACTTCTGGGGCCTCCTCCTGGTTCTGCCTTCTGTGGTTTTGGCCAAAAAGGTATTTCCCCCCTGAGCACAAGAGAAAAGATCCTCTTAAATACCTGCTGTGATCTGCCTTGCACTTGCTGAGGGTAAGGGCATAATGCTGCCCTTTCCTCTTTCTTGTTGCCAGACTATTCCAGGAGCAGTCACTCAGCCTTGAGTGTCTTGACCATGTTGTGTTTAATCACTGTGACCCAAAGTATAGGCGAAGTGTTGTAAGGTGCCTTGGTCAAGAAGTGGTAGAGGGGGCAGAGCACTCCCTCAACCCAGTAGGTCTTGAGGGGACTACACACTGGCTGAGCTGCCACCACTGCCCTGATGAACTCAACTGCTGTTTATTTCCTCTTCCTTCTTTTGTATCTATATCCACACAATTCCCAATGTCAGCTGTTATTGCGTGAATAAACCAAGGATCAGTGCCTCTCGTGTAATTAGCGCTTTTGTGCCTATGTATGTGTGTTTTGTTCTTTAGTTGGGAGACATGGGATTTTACAGTTTGGTGACAGATTGGCAGTTTTAACCCCAGTTCTTAAGTCCATTCTCCAAAACAGATTCTCCAGACGGATCGAGACTTCAAGATAGTCCTGTTGAGGTACTATTTGGTCAAAATTGGACTGACTGTAGTAGACCCATTCAAAATGACGAGTTACCCTAGGTTAGCATTCCCAGTAGCATCAGCCTCTCTTCTGTCTACTGTACTATCTCAGACCAGCCATAGCTCAGCTGGAAGGAATCTTCTATGGAGGGACAAAGCAAAGGCCATTGAGGGTTTCCGATCAAGAGCAATGTTCTAGTTTTAAGGGAATCAGACCACCATTTCCAAAGTGTCTTCAGAAACTGTTACAGTGTGTTCCTATCAGAAACTGTTACAGTGTGTTCCTAATTATGCTGGGGGTTGTGGGGGGTGTTTTTTGAGACCAGATAAACATGTTCCATGACAAAAGTGAAAGTCTTTTGTATGTGGATGTGCATTTTCACAAGCATATAAATATGCAGTTATATCTCTTGAATTCATACCTGCCCACAGCCCCATCTACAGAAAAGTTTAAACTTTCCCTAAGATCTCCTGGCTCTTCACAGGTCCCTGCCCACTTCATGTAAACAACTGTTTTACCCTCAGGTCACCATAAGTGCTGAGAGCAGAGTTTACATGTTCCTTGATATATTCCCATACCTAGAGGAAGCAGGACTTAGCTTGTGGGTAGTAAGTCAGGTTTCTTTCCCTCCCTTCCCCCCAAACATGTTGTAGACTAAGTGTTTAGAAAAAAATGCTGGGCTGGGCAGCCTGGAAGTATGAGGCCCCAGTTCTGACCTGGTCTCCGAAGTGCATATTTGAACAGAACATCAGACTTCACAGTGTGTTTTTAGATGTCAGTCTTTATAGCATGTGGTAGTGTTTATCTAAGATGAATTTATAATTTCAGAGTTTTAATTCCCATAATCCTATCACCATAGAATCTTTTCATATCAAGAACATTTTCCAAGTTAGTACAGTATTTTTAAAAACTGCATTAAGAATCTATTCATGGTATGCCATAGTTTATTTTTAATACCCTAAATGGTAGGTTTTTATAATGCTGAGTACAGGCCTTGAACAGTCTGGACTGGCAGCCTTCTATCATTCATTATATCCTGTATTATCATCTAGAAAATGAGAAAATGCCTACCTCAGAGATGATGAAATATTATATTTAAAGTGCTTAACCCAGGCCTGCCTGCCTTGCACTGTGCACGATCTTCCTTCTGTACTCCCCTCAGGCTGAATTACCCTGGTCAGAGGGGAGGAGGCTCAATGGCTGATAGTACTTGTGAGCGTATCCCCTTTCCTGAAGAGAGATGCTCTGCCTTTGCCCTGCCAAGTGTGCAAATCCTGAGGACTATAGGTATTACTTACCTATTTTTATGGTGACAGTTGCCTTTGACCTTGTGAAAAACTGCTCTGCTTTGAGACAGGGTAGCTACCTGTCTCCAGGAGCATCACACTCTCCCAAAGGTTTGCAACAACAGAGGCATAGTCCTTCAAGCTTTGTCCCATTAATGGTGGTGCTCTCCAGAGAAGAAAGGACCAAACACTTGCTGGGTCTCCTGTGATTGCTGTGGGTCCTATCCCTGCAAACCTTCCCTGGTAACAGATACTTAAGAACCTTCTAATTACTGCCCCTTGCTTTAAGTGTGGCTTCTGTTTTAAACAGTATTTGAAACCACTGGAGAACCAGCTGTTACAAAGGATAAGTATTAATGGACATTCTTATTGAATGTCACCATTTTAATGGGCACTTTTAAAAATTATATTCATTGTACAGATTTTCATGAAC EMBV3_11865 GAAGCAGGAACGGAGGAGTCTTTGACACACTGGAAATGGATATAAGAATAAGTCCCACCG Gene BVT0102_078103 + 0 NULL GK000002.2:110405364-111129285 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106226 TCONS_00106230 TCONS_00106227 TCONS_00106233 TCONS_00106225 TCONS_00106224 TCONS_00106232 TCONS_00106231 TCONS_00106228 TCONS_00106229 1 XLOC_062750 Coding TCONS_00106231 XLOC_062750 Coding Coding PAX3 2:111127673-111205057 j TSS78229 2750 1 TCONS_00106231_2 201 6 0.964540015248827 0.000893496824536794 0.00193508334588782 0.00179809644578356 0.00143877085627901 0.00107911887459287 0.000518309566888549 0.00110291512888336 0.000797305177364902 0.000826146128788899 6.75225350749723e-28 5.47339249741138e-13 2.77331344167053e-05 7.24226750196536e-05 0.000168057382247602 0.000827234720205443 6.01027832797698e-20 2.61296647538378e-21 8.79044464258119e-09 0.000930109660785415 0.00229620961579116 5.18714112917559e-08 3.13444185312627e-22 1.67426535808525e-25 4.75653693147071e-12 0.000832362411614993 0.0016462147947182 0.00131719695748503 3.10839722103634e-11 7.84357646285865e-20 6.34231698808567e-12 NM_001206818.1 PAX3 Bos taurus paired box 3 (PAX3), mRNA. 0.0 4266 100.00 0.859636363636364 NM_181458.3 PAX3 Homo sapiens paired box 3 (PAX3), transcript variant PAX3D, mRNA. 0.0 2812 86.29 0.86 TCONS_00106231_2 sp|P23760|PAX3_HUMAN PAX3_HUMAN Paired box protein Pax-3; 5e-132 384 97.92 0.950248756218905 1 coding 1 0 1 0 -0.334863159162245 0.187385629711042 -0.117276804906247 0.129278148895882 CAAATTCTTATTACTTCATAACAAATGTTTCCCATTGAAGCCTACAGCAGGATGTCTGCTCAGGGAGGTTTGTTTAGATCACATTTTCTTCCCCTTTAAGCCTCTTTAGTTGACATAACACTTATTCCTTGCTTGGGCACCGTGCTGCTTCTTGGGAGAAGTGGCAGCAAGAACAGAAGAGGTAGACTGACATTTTAAAAGAAGTCAAGCTAATACCACTTTTGTAAGTCTCCAGATTTCAGGACAGCCTACTCTGCTTTTTCTTCAAGCCTCGGCACCCCAATCAGATGAAGGCTCTGACATCGACTCTGAACCAGACTTGCCCCTGAAGAGGAAACAGCGCCGGAGCCGTACCACCTTCACAGCAGAACAGCTTGAAGAACTGGAGCGGGCTTTTGAGAGAACCCACTATCCTGATATTTACACCAGGGAGGAACTGGCCCAGAGGGCAAAGCTTACAGAGGCCCGAGTACAGGTCTGGTTTAGCAACCGCCGTGCAAGATGGAGGAAGCAGGCTGGGGCCAATCAACTGATGGCTTTCAACCATCTCATTCCGGGGGGATTCCCTCCCACAGCCATGCCGACCCTGCCAACGTACCAGCTGTCAGAGACCTCTTACCAGCCCACAGCTATTCCACAAGCCGTGTCAGACCCCAGCAGCACCGTCCACAGACCTCAGCCGCTTCCTCCAAGCACTGTACACCAAAGCACTCTTCCTTCCAACCCGGACAGCAGCTCTGCCTACTGCCTCCCCAGCACCAGGCATGGATTTTCCAGCTATACAGACAGCTTTGTGCCTCCATCCGGGCCCTCCAACCCCATGAACCCCGCCATTGGCAATGGCCTTTCACCTCAGGTAATGGGACTTCTGACCAACCACGGCGGGGTACCCCACCAACCCCAGACTGACTACGCGCTCTCGCCTCTCACTGGGGGCCTGGAACCTACCACCACGGTGTCGGCCAGCTGCAGTCAGAGACTAGACCATATGAAGAGCTTGGACAGTCTGCCGACCTCTCAATCTTATTGTCCACCCACCTATAGCACCACGGGCTACAGTATGGACCCTGTCACGGGCTATCAATATGGGCAGTATGGACAAAGTGCCTTTCATTATCTCAAGCCAGATATCGCATAAGTGAACTGTCCACTTGGAGCGTAAACTGGCCCTGTATCCGGTCTCCACGGCCTAGACATGAAGAATCTTCTCAGAAAAAAAAAAAAAAAAAAATTACCCTCTTGGGGGGGCAATCTCGACAGGAGACAAAGGAGAATGATTGATTTTCTTTCTCCAGTAGTTGGTTTCAAATTCTTTTGAACGTGTCGAACAAAAGCAGTGGAGAAAAGGAAGATCTGGAACAATAAAAGACAAATGCAACATTTTAAGGCAATGATTTAACATGGCTACATATCAAATATCCCAACTCTAGTGCAGATGATCAAGGAGCTAAAACATTCCATTTGTGTGTGTGTGTGTGTGTGTGTGTGATTTATTTTAACTGGTTTGGGTAAGCAGAACGTTCTGAAAATATAGTCGGAGAAGAAAGTAGAACAAGTTTGACGTCCGATGCTGACACTTCTACAACTTTAAAACTGCTCGCTCCATGAAGCAGGAACGGAGGAGTCTTTGACACACTGGAAATGGATATAAGAATAAGTCCCACCGTTTTTAGGAAGTTAGACTAGATGTAAAGGACGTCCCCAATAAATTATTTGTTATCTTACCCTCATCTGTAATTCGGTTGTCAATATACGACCTGGGTGGACACGTCTTGTCACAGGACGGGAGGGTGGGGAAATCCAGGAGGAAAGCTTGTTTTCTTTCTCAGTGTGGAAGACGTGTGTGACATGTGCCCAGTTTATTTTCATTCGGAAGCCAACCTGGGGTGGGGGGTGGGGTGGGGTGAAAAAGTGGTGCGCATTCCCACAGCTGCTTATCAGAGTGCAATACTGTGTACCTCACGGACGCTTTGGCAAAGTCCAGGGCCCTAGAAACAGAAGCAGAATTCTATTTTTGCAGGTGCTTTATTTTTCGCAGCCCATGATTCATTGTGGTAGAATGCAGTGACGTTTGCCATTTGCTGGACAACCAACACCCGGCTTGCCCCTTTTGATGAGAGAACATGTTCGAGAATAATCCTTTTTAAATGACTACGTTTACATTCTTGTCTTTTCTATGAAAGGCAGGGCAGCAATACCGATGTCCATGTTGGCTCTCATGTACTTTTAAATTATACAATAATATCCAATATGGAAAGGTGATAGGAACTGAGGTTTACATATGTTTGTGTGGTGACATTTTAGAATGTCAATAAATTTGTTTTTGAGATGTTCAGAGGAACAGGACGGTGGAAGGCAGTGTTATTTATTTCTTTCTATTCTTGGAACCATGAATGAGGTAGGCACAAATACATTCCTTTTAGAGTTAAAAACTATGATGTAGTGAGTTAGCGAGACTAGACATAGTACTGAGTTTAGTTCCTACGTTGGTCTTAGGGGGTGATGGATCGAGAGAAGAGCTATCTTCGTGTTGCAGCCTCAACCAACAACGATGTGTTGTAAAAATGTCTTTCCTGTAAAAAAGTGCAGTAAATATTTACTATTTATAATGAATAAACAGTTATGAAAACTTGCCCAACACTGATTTTTTGGGGGGGAACTGGTGAATGCAGTATTAATAATAACGTGGAAATGTGGAACCATCAAGGCTTATGCTTCACTTCTAATCTACTGCCTTTTAGATTAAACCA EMBV3_01715 GAAGTCCTTGGAACTCAACCAGCAAGCTCAACTTTACAAGTGCCTTGGTATGCACCTCTG Gene GeneID:539491|GJA5:NM_001078022:83_cdna Constitutive 0 NULL GeneID:539491 3 GENE GJA5 NULL gap junction protein, alpha 5, 40kDa EMBV3_25922 TCTCACAGTTCTACATCCTGTCGGGCGGCGGATCCAGACTTCAAATCCCAGAAGAGTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40261 TCACAATGGGACTCTACACGGCTTTGTCAACCACACCCTCTCCTTTTTCAACGTCAGCCA Gene GeneID:512529|ANO2:XM_002687896:101_cdna Constitutive 0 NULL GeneID:512529 5 GENE ANO2 NULL anoctamin 2 EMBV3_26419 GTATTGCATCTCTCTACCACCCTTCAAACCACAGATGGCAAGGCTTACCATCCTAGCATC Gene BVT0102_049670 + 0 NULL GK000027.2:22993917-23016741 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155240 TCONS_00155242 TCONS_00155239 TCONS_00155241 TCONS_00155243 1 XLOC_094674 Coding TCONS_00155243 XLOC_094674 Coding Coding DLC1 27:22954780-22996147 j TSS116192 4300 1 TCONS_00155243_4 501 0.0132558139534884 13 0.896364163806024 0.000104512586718295 4.04877077615844e-292 1.12097979423618e-299 2.37689458865885e-05 1.95167948565916e-05 0.000114828935758098 1.89867961318918e-05 0.000103835048438615 3.43035902812333e-05 2.24569660589624e-98 1.58815413144604e-164 4.43357406009287e-10 2.65870512110092e-05 0.000372547231692327 1.17135548009104e-09 0.0101187949234505 0.00643610393314518 0.0109577260761493 4.31121522342028e-05 2.78798289025374e-85 2.3057358039432e-10 0.00377123513415692 0.00314912108203379 0.00510745758918968 6.78524334309485e-05 5.07927552101945e-05 1.34022098960923e-06 0.00103770271168396 1.60146252112315e-192 0.00138215619044937 NM_001102493.1 DLC1 Bos taurus deleted in liver cancer 1 (DLC1), mRNA. 0.0 3268 99.94 0.421860465116279 XM_005273374.1 DLC1 PREDICTED: Homo sapiens deleted in liver cancer 1 (DLC1), 0.0 4112 82.13 0.938139534883721 TCONS_00155243_4 sp|A7E300|RHG07_BOVIN RHG07_BOVIN Rho GTPase-activating protein 7; 0.0 1047 99.80 0.998003992015968 2 coding 0 0 0 0 -0.236868491629655 0.179248965941714 0.0203746711525717 0.684827435748769 TTGCCTGGAAGTTCAAGGACTAGTCCAAGGTCATATAAATCGAAGCCAAAGAAGCTTGTGATTGGCTCCGAGCCGCAGGATTCCCCCAGTATGCCCAGCTTTATGAAGATCTTCTGTTCCCCATTGATATTTCCTCAGTCAAGAGAGAGCATGATTTTTTGGACAGAGATGCTATTGAGGCTTTATGCAGGCGTCTAAATACTTTAAACAAATGTGCAGTGATGAAGCTGGAAATCAGTCCTCATCGGAAAAGAGCACAGGCTGAGATGGCACAGCTTCCAGAGCTCTCATCGGCCGAGCCTAAACTCCGTGTCACTGCAGATTAACTGCCAGTCAGTGGCCCAGATGAACCTGCTGCAGAAGTACTCCCTCTTGAAGTTAACCGCCCTGCTGGAGAAATACACGCCTTCTAATAAGCATGGCTTTAGCTGGGCTGTGCCCAAGTTCATGAAAAGGATCAAGGTTCCAGACTACAAGGACCGGAATGTATTCGGAGTCCCTCTGACAGTCAACGTGCAGCGCACAGGACAGCCCCTCCCCCAGAGCATCCAGCAGGCCATGCGCTACCTCCGCAACCATTGTTTGGATCAGGTTGGACTCTTCAGAAAATCGGGTGTCAAATCCCGGATTCAGGCTCTGCGCCAGATGAATGAAAGCACCATAGACTGTGTCAACTATGAGGGACAGTCTGCTTATGACGTGGCAGACATGTTGAAGCAGTATTTTCGAGATCTGCCTGAGCCACTGATGACAAACAAACTCTCAGAAACCTTTCTGCAGATATACCAATATGTGCCCAAGGACCAGCGTCTCCAGGCGATCAAGGCGGCCATCATGCTCCTGCCCGACGAGAACCGGGAGGTCCTACAGACGCTCCTTTACTTCCTGAGCGATGTCACCGCAGCCGTCAAGGAGAACCAGATGACCCCCACCAACCTGGCCGTGTGCTTGGCGCCTTCTCTCTTCCACCTCAACACTCTGAAGAGAGAGAACTCCTCCCCCAGGGTAATGCAAAGAAAACAGAGTTTGGGCAAACCAGATCAAAAAGATCTGAATGAGAATCTCGCTGCCACTCAAGGGCTAGCCCATATGATTGCTGAGTGCAAGAAGCTTTTCCAGGTTCCTGAGGAAATGAGCCGATGTCGAAATTCCTACACCGAACAGGAGCTAAAGCCCCTTACCCTCGAAGCGTTAGGACGCCTTTGTAATGATGACTCAGCCGACTACCAACACTTCCTCCAAGACTGTGTGGACAGCCTGTTTAAAGAGGTCAAGGAGAAGTTCAAAGGCTGGGTCAGTTACTCCACATCTGAGCAGGCCGAGCTCTTTTATAAGAAGGTGAGTGAAGGACCACCTCTGAGGCTTTGGCGGGCAACCATCGAAGTCCCTGCAACACCCGAGGAAATCTTAAAGCGCCTCCTGAAAGAGCAGCACCTCTGGGATGTAGACTTGTTGGATTCAAAAGTGATTGAAATCCTGGACAGCCAGACTGAAATTTACCAGTATGTCCAAAACAGTATGGCACCCCATCCTGCTCGGGACTATGTCGTTTTGAGAACATGGAGGACTAATTTACCCAAGGGAGCCTGTGCCCTTTTACTCACCTCGGTGGATCATGACCGGGCCCCTGTGGTGGGAGTGAGGGTCAATGTGCTCCTGGCCAGGTATCTGATCGAACCCTGTGGGTCAGGGAAATCCAAACTCACCTACATGTGCAGAGCAGACTTAAGGGGCCACATGCCAGAGTGGTACACGAAATCTTTTGGACATTTGTGTGCAGCTGAAGTGGTAAAGATCCGAGACTCCTTCAGTCATCAGAACACTGAAACCAAAGACACCAAATCTAGGTGATTCCTGAAGCGTGTCCACTGTCTGGGCGTTTGTTTCTAGAACACTTGCCAGTTCTTGGAAGATTGGGTTCAGTGTCTGATCCTGAAACGAAACTACAAATTGGAGAGTGGGAACTGACTATAGCGATTTGATACCTTTTTAAAGCTGCTTCTTGTTTGTGTAAGGTCTGTATTATGGACCTTGACTGGAATATATGACTGTGCAAAAAAAAAAAAAAATGTATTCTTATTTGAATTGCTTCTGAGAAGCAAAACTCTATAACTGCATTCGGGAAGATAATGAAGAGACTTCATTTTCTTGCAATGTCAGCGTCTGTGTTACATGTACCTATGTCATTTTCTTTGCAGTGTGTGGAGGGATGGGTGTATCCACTGGAATAGTTGGTCCTCTTTGACATGTTTTCTCACTGAGAAGAGCAAAGAAAGGTTTGCACAGAGGAGCGTGTGTATGTGTGTTTGTTGCTGGTTGAATGGCAGAGATGTGTAAGTTGGGCCGCAGTGTCTGGCACACTGAGACACCTCCAAGAAGGATTTTGATGCACCAGGTCCAGTTTAACCGGGAATATCTGACCACCCATGGAATCGTCCAGAAAGGGAACCCGTTTATTTTGGGGTGTTGGACAACCCACCCATGTCTTTTTTTTTCTTTTCTTTTCTGAGGTAGTAGACATATTCCTTTTCCACCAACCTCTTCTTTACCTTAAAAGTGGTTGTAATTACTCAGATAGCCCCTTTCGAACGCAGTTTGTCTCTAAATCTGATTGCGAGGAGCAAAGTTGTTGTTATCCAGTAGAGGTGAATTCAGGGATGGAAATTCTTCCTTGCTAGCACCAAAGCAGTTTTGTTTTGGTTTGGTTTGGTTTTTAAGTTGAGATGTGAAAACTGACCACTCTATCTACTTCTGAATCAAGTATCAATACTTTCTATGTATCTGCAAAGTCTTTGCATGTCTGTGTTAGGAGAAACTCTTAAAGGCACTATGTATGGGAACACAGGAAACTTATGTCCCAGGGAACTCCGTGCAAATGTAACCCAACCAAAAAGTTGCTTGTTGTTGTTATGGTTATTAGCAGCATTTTTTTAAAGCTGCATATGTTTATTAATTGCATTTGTCCTTATCAGCAAAGAGGGTTTGTTTTGTTTTTCCTATATTTCTTTTTCTTCTCTTTTCTGAAGCCCTTGGGATAGATTTTAGTAGTAATGGAAAGTTCTAATCACAGTAAAAACAAATAAAAATACACTTGTGCAGGGTTTTGGAAGGGTGGTCTTTATACAGGTTTTACTGTAATAGTAAAGGTTGGCTCAAAAGACAGTATTAGTGAAATTTATTTTATATGGATCAAAAGTGAATAATGTATGAATGAGAGTTGTAAGAAGGATTTTAATTTTGTTATAATTTAGTTACCATTGTCAGTGTTATTTCAAAGGTTCTTTGAAGAATTAAGGGGCGGGGGACAGATGAGAGTTTAATTTGAGTATTTTGGATATTAGTGTTCCTCATGAAGATATACTTGTATATGCAATTTTAATGGCCTTCAGATTTGTAAGATTGTATGTTGTATATACCATTCTATTAAGAAATATGTACACCTACCTGTCCACTGTGCTTCCCAACATAGATAAAGCATGATAAAAATTATTATTTAAAATATACTTGTATTTATACCTCAGATATTCTTTTGGATTTTGTACCTCAAGTCTTTTTGGTTTGTTTTTTGTTTTTTGCTAATGTAAATACACTTTACATGAATACAGTCTAAGTGAAAAAAAAGTAAATAAAAGAAGAGGTTTATAACTTGCTCTATATCTGTACAGAATATAATCAATAAGTGCACTATTAAATGTTTAAAGTAAGGGAAATGTCTGGCCTGCTTTCCATTGTATTGCATCTCTCTACCACCCTTCAAACCACAGATGGCAAGGCTTACCATCCTAGCATCAATTGAAATGAAAATACAGATTTGCTGCAGGAAAAAATCAGACTGCAAATCATTCCAAGGCCAAACTGCAACTGAGCCACTCACTCACAAACAGGAAACCCTGGTGAAGGTTCAGGAAGCACAGAGATGCTCTCCAAACAAAGGTCACGAGGAAACGATGCTGAGAAAGTTACAAGAATAAGCAACAGCAACCGAAAGATGCCCCTAAGCAAAGCCAAGGTCATGGATTCATTCCATAAAAGGTCTCTTTCCCACTGTTTGCTTTCCTGTTCAAAGGATTCCTTACATATTTGACCGGAGGAGAATGTGAAGGATATGAACATTTTCAAGAAGTCTGCTTTAAGCCACCTACCGTGACATTGCCCCAACTTACTAATTGTGACTAATTGCCTAGACTGTAAGCTCTCTGAGAGCAGGGCTCTTCTACATGTCTTTATAATCCCCGGCAGCAGCTTTCAGTGTTTTGTACTTGTAGGCACCTAATAAATTTATTATTTGCCAAGTGGAATT EMBV3_40490 GACCTGCAGCCGACATTCCTGGCGCCCCGGACGAGTCCACTGCGTGCAGAGGCGTCATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10871 CTATATTGGGTACCACACCAAGGACTCCTACTCCTTTTAAGAATGCGCTTGCTGCTCAGG Gene GeneID:338034|MYBL1:NM_176635:10_cdna Constitutive 0 NULL GeneID:338034 14 GENE MYBL1 NULL v-myb myeloblastosis viral oncogene homolog (avian)-like 1 EMBV3_32977 TGCACACTTATCTGCTGTGAGGCCTCCCCCTGTTCTACCTCCTCATGTTGTCAGAAGTCT Gene GeneID:100299102|LOC100299102:XM_002685128:80_cdna Constitutive 0 NULL GeneID:100299102 1 GENE LOC100299102 NULL hypothetical LOC100299102 EMBV3_02003 AGCTGCTTTGGAGGTATCTCTCACTCCCCGTAGGGCGCTTTTACTGTTATCTTAACTGCG Gene GeneID:616756|SIX3:XM_002691302:412_cdna UTR3_Alt 2 NULL GeneID:616756 11 GENE SIX3 NULL SIX homeobox 3 EMBV3_26846 GGCAATCCTGTCCTCTGTCTCTGCCATCAGGTTTGAAATGACCTCGCTCAGTGCCTCTTT Gene BVT0102_067219 + 1 EMBV3_17882 GK000006.2:71462047-71562164 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27635 AGCAACTTCCGCACTGTCCTCCAGTTTGTGGCCAACCTCAGCAGGGAGTTTGAGATTTCA Gene GeneID:280957|VIT:NM_173971:12_cdna Constitutive 0 NULL GeneID:280957 11 GENE VIT NULL vitrin EMBV3_24607 TCCAGCCCCCAACACTCATCCCACTCAGCATTTTCCTCCCGCTCTGGTTCCCTAAGTCTT Gene BVT0101_009502 + 0 NULL GK000018.2:53853374-53874173 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33472 TAGCCCCAACATACCATGATGTTCAGAGTGGGAGGATAGACCCACCAGTCAGGGTAATAC Gene BVV0102_402407 + 1 EMBV3_01880 GK000029.2:1121215-1223088 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02685 TGTGCATTCATGCCTGTGACCGCTAGGTTTATTCGGGCAGCATTAGAACAAATCGCAGGC Gene GeneID:618601|ULK2:NM_001102321:114_cdna UTR3_Alt 2 NULL GeneID:618601 19 GENE ULK2 MGC160050 unc-51-like kinase 2 (C. elegans) EMBV3_05879 CCAAGACCAGGGAGAAACATAAGAAAGAGGCGGAACTGACAGAGATTAACCGTCGGCACA Gene GeneID:515669|PLCB3:XM_002699329:176_cdna UTR3_Alt 2 NULL GeneID:515669 29 GENE PLCB3 NULL phospholipase C, beta 3 (phosphatidylinositol-specific) EMBV3_41746 CTGCTGTGCCTGGTGGACATGCTGCTTTGGCTTTCCAAGTGGGCTTGAAACATTGAGGTT Gene GeneID:512153|MTERFD2:XM_002686595:66_cdna UTR3_Alt 2 NULL GeneID:512153 3 GENE MTERFD2 NULL MTERF domain containing 2 EMBV3_12835 AGACTTGGGAGTCAAAATGCACAAGGAAAGAGAAGCCGGGTGGAAGACAGTTTGGCTGAC Gene GeneID:790164|SLAMF7:XM_002685861:415_cdna Constitutive 1 NULL GeneID:790164 3 GENE SLAMF7 NULL SLAM family member 7 EMBV3_39293 CCCTCCCACCCGCCCTCCCACACCTCCCTGGCTTCTCAGAGGGGGAAGGTCACCCTCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08890 AAGGAAATTGGCCGCCCAGAACCTTGCTCCGTCTCTCCACCTCATTTTCCCAAGTGCGGT Gene BVV0102_186783 + 0 NULL GK000008.2:104377037-104444148 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28380 GCTTTATAAGGTACTCATCTAGGTCCTTGTCCAGCCTCCCTCTGTGTCTAAGCCTTAATC Gene BVV0102_346974 + 0 NULL GK000008.2:80633398-80641484 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228369 TCONS_00228363 TCONS_00228364 TCONS_00228368 TCONS_00228365 TCONS_00228367 TCONS_00228362 TCONS_00228370 TCONS_00228366 TCONS_00228361 1 XLOC_138481 Coding TCONS_00228361 XLOC_138481 Coding Coding GOLM1 8:80637445-80688005 j TSS170285 5280 1 TCONS_00228361_3 402 9 0.895745564587907 2.15619710333322e-33 1.56503099842356e-05 1.91589298711605e-06 1.00217886441237e-59 5.75066350479288e-05 6.61859956910105e-09 6.50542949013176e-06 3.31355935305829e-09 8.69161747503941e-11 4.97789624414745e-08 7.25733139389315e-06 1.93264004980789e-21 6.9496174016567e-12 2.60453482577414e-56 1.05651489304783e-157 0.00153285870639927 1.03788089006328e-23 4.15831888641833e-15 2.70566577720775e-14 4.54273409112917e-24 1.15255313680241e-20 8.26545091668901e-15 0.000146103385848311 0.00155469186909557 7.66982086019666e-05 2.22630268844423e-14 5.14776258152101e-07 0.000129628015277498 1.65881874146666e-09 3.13593897977066e-05 XM_005210393.1 GOLM1 PREDICTED: Bos taurus golgi membrane protein 1 (GOLM1), transcript 0.0 3566 100.00 0.374242424242424 NM_016548.3 GOLM1 Homo sapiens golgi membrane protein 1 (GOLM1), transcript variant 0.0 1615 75.75 0.430681818181818 TCONS_00228361_3 sp|Q8NBJ4|GOLM1_HUMAN GOLM1_HUMAN Golgi membrane protein 1; 0.0 597 80.99 0.997512437810945 0 coding CTCAGCCCGGCCCTTGAGATGATGGGATTGGGAAACGGACGTCGGAGCATGAAGTCACCACCGCTCGTGCTGGCTGCCCTGGTGGCCTGTATCATTGTCCTGGGCTTCAACTACTGGATCGCCAGCTCCCGGAGCGTGGATCTCCAGACGCGGATTGTGGAGCTGGAAGGCAGGGTCCGCAGGGCAGCTGCGGAGCGAGGGGCTGTGGAGATGAAGAAGAATGAGTTCCAGGGGGAGCTGGAAAAGCAGCGGGAGCAGCTGGACAAAATCCAGTCCAGCCACAACTTTCAGATGGAGAGCGTCAACAAGTTGTACCAGGACGAAAAGGCCGTTTTAGTGAATAATATCACCACAGGCGAGAGGCTCATCAGAACCTTGCAAGACCAGTTAAAGGCCCTGCAGAAGAGTTATGGCAGGCTGCAACAGGATGTCCTCCAGTTTCAGAAGAACCAGACCAACCTGGAGAGGAAGTTCTCCTACGACCTGAACCAGTGCATCAGTCAGATGAAAGAGGTGAAGGAGCAGTGTGAAGAGAGAATAGAAGAAGTCACCAGGAAGGGAAATGAGGCCATGCCTTCACACGATCTAAACGAACAGAAGGACCAAAGCCAGCAGCCTCGAGCCCCCAGTGAGTCCCAGCCCAGGCCGCAGGAGGCAGGCCCGCCCCAGGCAGAGGTGCCGGAAGCAAGAGGAAACGTGCCCAGCCACAGTGAGCCCCAGACACCAGCCCCTAGCTCCGAGGTGGCTTTTGATTTGAAGAGACAAGAGGAAACCAAGGAAATTCAGGTCGTCAGCGAGGAGGAGCTTCAGAGGGACAGTCTGGCACTGCCGAAGGAGCCAGGCCGAGAACAGGAAGTGGAAGGAGACAGACAAGTGGGCGGAAAAGGCAATGGAGAACCCGGAGAGCTGGGCCAAATCCCACAGGTCCCAGCCGCCCTGCTGGCCAGCCAGGAGAATCAAGAGGCGGAGGGCCCTGAACGGGACCAGCTCGTCATCCGCGACGGACAGGAGGAGGGGCAGGATGCCGACGAGGAAGGGAGAAATCAGCAGAAACTGGGAGCTGATGATGACTACAACATGGATGAGAATGAGGCAGAATCTGAAACAGACAAGCAGGCAGCCCTTGCAGGGAATGACAAAAACAGAAATGTTCTTAACGCTGAAAATCAGAAAGGAGACACAATAAATTTACTTGATCAGCATGAAAAGAGGAATCACACACTCTGAATCAAACTGGAATCACATTCTTGTGTGTCAGAATTGAACAGAGATCACTATAATAGTCACAAGGGATTGAATACTGTGAATAATGTACTAAGTAAAATATCTAAAGATGATTATTGTGGAGTTTTAGTTTGTATTTACAATGTAGGAAAATGAGATTGTCTTTGAGACAGTGTTTTAGAGGTATTTTTGAAGTGTTTATATTGAGATGTCAAAATTGTTGAAATTTGTTGGCTAATAGGTATTTCATAAGAAGATCAACACCAGAAATAGAACACAGGTTCTCCTTCAAGTACGACAACAGCAGGATTCATGTTGTGAAGTGTAACCTTTGCTGTGAAGGGGACTCCCATACTCGCAGAGCTCCTTGTCTTCAGGTCCCTCTGGAGTCATTCTCTTCGCCATGTGCTGCGCTGAGACAGGAACCAGCCCTGCAGTCGGCATTGAGTGATTTTTGGTTTATTCTTCGGTGCTCACTTCTGGTTCTGACAATCAGTGGCCTAGAGCACTGACTGTTAACATAAACATCACGAGCAACGGTGTTAAACAAGTCTAAACACAGAGGTGTTTTCTGTGAGGATTTTTTAAAAGACTGCTACTTGTACAATAACCCTTGTCATTAATGTACAAAATGCTTTCAAGTGACTTGTAATTTGAGTACCTGTGATCTATACTTGCCTTGCTTAGTATGTGTGGGCAAAGCATTACCAAGAAAAGCCACGTGCAGATTAGACTTCTGACACAACGGGCCAAAGCAGGGCTGACCTTGGGCACGTGTGGCAGAGAAGGTAGTACCGCACTGTGGGTGGGTGTGCTGCGGACACTGCCTACTTCACTGCTAGAAGAGAAGAGAAATTTGATGATGAAGGAGATACACAGCATACAGATTTGGAAAGTTTAGAAAGTCAAATGCAGTAGTTGTCTTTTTCAGTTTACACATGTACCTTGTGGTAAAGGACCATATCACAAACTGATTTAAAAACCAAAAGTTAATTTGAAAATGACTAATCGTAATTTGCTTAATAGTGACATCAGGTTTGAGTTGGTTCTTGCAAATAAACAGGCTCCTGTCAGACTTCACACTCACATTATGACCTTTAGAAAGGCTCCCTACAGGGTTAAGTGGGTGGTGATGCTTATTAAATCAGCATTCTGAGTCATAGGGCTTGAGATACAGGGGCTTCAGGTCATGTGACACAACCCCCTGTTAACAGAGAAGAGACTGGGGCCCAGAGGACTTCTGAAGCCTCTCCAGGCCCAGCCAGCGTGCCTGCTTCGAAGCTGGCTTCGGACTCCTGGTGCCCCTGCTGCCACTGAGGGGCGGGGCCTGGTCTGCATTCAGGTTATGATCGCCAACTTGAATGCTGTGTGGTATTTTCCTACCTAATTAAGATTGTAACTGCCCACCCAGAAAAGGCAACTGAAGGGTGTGAAAGTAGCTTTATAAGGTACTCATCTAGGTCCTTGTCCAGCCTCCCTCTGTGTCTAAGTCTTAATCAGTCTTAGGGTTGATGTCTTGCATATTAGCCTTTATTCATCTCATGTTTTATCAGTGTGCCTAGAGTTGCTGAGAAATGAAACTCTGTTCAGGTTTTAAAACTGCTTTCAGTTTTCCCTTCATCTGCTGGTGAAACCCTAAGGAATCAGCTTGTAAACTGTGGATTAAGGATTAATAAGGATTTGCCTTATTAATTAAACCTTTCTGTGGAATGAGATGCTGATATAAATAAAAAATAATCATGATTTAATCTCCTTGTACAGAGGCACCTGAAAGCTGTTTATTCGGGAGGTAGGTACTTGAGGTGTTTCTTCAAGCAGTCATGCTTTATTCCTGTTGGCTTCCCTTGGGATCAACTATTCCAAGGAACAATCTAGAGATGCCACAGCCATTTATTTAAAAAATAAAACCTGTGTAATAAGCATCAGATAGATTATCAAACAATGTGGTCTTTTGGGTTCATCTAAAAGCAGCAGCTAATCCAATTTTTAATAAACTGTTTGATTCACACCCTCCTCTATATTCTCAAATGGTGTGTAGACAAGGAGTGATGATTAATTTGATCTTTTTTTCTGCAGATGAAGATTGCCATAGCAGCTTTGGATTAGATTTCATGAATAATCATTGCACCTAGCATACCTTTGTGTGATGGAATTTGAAAAAACATTCCCTGATTAAGTCAATGTGGTATCATTAAATAACTAGTTGAGAACTGGCATAATTGTTTTATTTGGTAATTGGTGGTTATCTATTCATAACAGAACTTGAAATGGTGGAAGAGAATTGTAATTTCACAGTCTTTTAAGGTCCAGGGGGGAACTGGTCTATTCTCATTATGTATTTTAGCTTAAAAGATTATACAGTAATCTTTATTAATAATAACAATAATTACTCATTAATAGAAATGGTAATCTTTATTAATGATTATAGATTAAGGATAGTTTATAGGACACTCAGCCCACTAACACTTGCCTTTGAAATGAGTTTGAAATATACAAGTTTCCATTAATTCTAAGTTATACTAATATTTGGTTCACATTGTCATTTTAGATTTTGAAAATATTAGTATTAGAAAGTTGAGGAAATGGCTTATCTTGTGTATTTAAATGTTTATGTTCTATTTCAGCTCAGAGGGCAACACTTTCTTAAGGGTACTAACTAGGCCACTGTTCTTAACTGATCTGTAAGGTTCTGGTAATGTGCACACTGACGGATTTCTCAAAAGTAGGTCTCTTCCCATGCACTGTGCTTGTTGATGTGCCTGTGAAACTCATCTCTGGGAAGGAGACATGACTTGAAACATTCTCATTTGTAAACTATATATAAACTTAATGACTTTTTTTTTTTTATAAACCAAGACCTTGAGACAAATACCTGCTTTTTTTTTATTTTTTAAATCCTTACTCCTTAGAAGAAAACTAAATGTTCTAAAGTAGAATAAAAATCCTGAGTTGAGTGACACAGGCTTACACTTCATATCCCTACAGAGATTCTAATATTGCCAGGGGTGCTTGGTAAATTTGACTAAAGTTCAAATAAAGACTGAGTGATCAGAGATGTGGCCCTAGGCAACCTGATTTTTCATATAACTGAAGTTTTGCCCTTTAGAACGTTCATAAACAGATTTAGGTGGACAAATGCATTTTTAGAATGAGTGTTAATAGACATGTAAGAATGAGGATGAAAACTCAGGCTTTAAGAAGTAAGCCAGAGTCTTTGTGGAGCAGCTCCTGATGTTAGAGCTTGGTTTTTACTAATTTGGCTCTCTTAAAGTAGTACAGTGACAGTGGAACTTCAGTATGATGTAACATGTGTGCCTTTATCCAGAACTCAAACCTTCACCTGAATGTCTTAACTCACATCAAAAAAGCAGCCACATTATTATTTCACATCTGAATTATCATTTAAAAGAGTAATTCTGTGACCTTAACCACCAGTCTACAGCTGCCAGTTTTTTCCCTGTGAAGGACAATTCTGCTATAACATCCTTGCTCTGGCTTTTTGAGATGGGTTCTTTCAAAAGTTATTCTGGAAGTCAACGGATGACAAATCTCTTATCAAAACAAAGCACCACACTTTACTTTAAGCTTGGCTTAAAGGTTTGGCCTAAAATGTTTGAATTCTACACAGACGGTTGCAGATACTGCATCTTTACCTTATCAGTAGTTTAGAAATTCAGAGTGTTGCATAATAACTTTATGTGGTCCTCCAAAAGCTGATACATTCTTTTTAAATGGAAAGAATAGAAAGCATTGTTAGCAGAGGACTACAGAAAAAATTCTAAGTGAATGCAACCAGTTTCTTCGTCTGATACAAACTGTTTAGGGGCAAGGCTACCAGACTCCAACTTACCACCTCCTGGTTCCTACTTCAAAACTCCCCTGGCACTCTTAGTGTCCTGTGTTCTCACCATTAAGTGTCTCAAATTGAGCCTTCCTACTGCTCTGGAGGCCTTGATTTTAACCTTCATTCAGTTTTCCAACTAACTGCCTCCAGGATGTCTTTTATATTTTTAAAAGATCCACATCCCATTAACTGAGTGAACAGTTCTGCAAAAG EMBV3_18030 TCCAGCATCTTGGTCCTTGGATGGGTCCGTTGGCACATCTCAGCTTTTCTCTTTCCATCC Gene BVT0102_273158 - 1 EMBV3_09367 GK000011.2:101438629-101477217 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12807 ACCATCCCCCCTGGGAAAGAAATGCAAAAAAAGCAAAATGGCTGTCTGGGGAGGCCTTAC Gene BVT0102_272416 + 1 EMBV3_04358 GK000012.2:36340959-36373089 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24901 GGCAGGAAGATGGTGGCCGCAAAGAAGACGGAAATCTGAAATAGAGTATTACGCCATGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29051 CACTTTGACCCCAAATCTGCATCTCCGTTTTCAGGCCAGATCTCCCGGTGCTACAGTTGA Gene GeneID:281643|BCAT2:NM_001013593:38_cdna Constitutive 2 NULL GeneID:281643 18 GENE BCAT2 MGC137404 branched chain aminotransferase 2, mitochondrial EMBV3_01642 GTGGCGATCTGTGCTGAGTGTTGGCTCCACTGGGCTCTTCATCTTCCTCTACTCAGTTTT Gene GeneID:539478|TM9SF1:NM_001083743:231_cdna Constitutive 0 NULL GeneID:539478 10 GENE TM9SF1 MGC139365 transmembrane 9 superfamily member 1 EMBV3_14877 AGGCCTCAAAATGACTAAGCGGACTGGGAAGCCCCAAGGCTCCAGAGTAGTTAGGAAACA Gene GeneID:100299333|LOC100299333:XM_002700456:6_cdna Constitutive 0 NULL GeneID:100299333 X GENE LOC100299333 NULL hypothetical protein LOC100299333 EMBV3_11289 CTGGTCCCAATAATGTCACAATGAGCTGGAACGCTTGAGCAATTCTTTTTCCAGTTGGGC Gene BVT0102_180173 + 1 EMBV3_03285 GK000019.2:44082974-44170622 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28185 AGAGGCTGGGGTATTTATTTCCGGTTGGAGTTTGCCACCCCCAGTGTTCCTGAGAAAGCA Gene BVT0102_132139 + 1 EMBV3_25386 GK000023.2:50095626-50234184 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22121 AGGCCTGGGAACTAGGGCACAAAGAGGCTTGATAATTGCATGACGCTCCCTGTATCGCAA Gene BVT0102_119510 + 0 NULL GK000009.2:69514983-69915682 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37662 GTGCCTGGAAACAACTGGATCAAATATAAAGTCTCAGGAGGCGGTGTCTCAAACCCTCAG Gene GeneID:513653|WDR52:XM_002684775:294_cdna Constitutive 0 NULL GeneID:513653 1 GENE WDR52 NULL WD repeat domain 52 EMBV3_28797 TTGGAAAGTGGGGAAGTTAATCAGTCCTGGGGCTTTCCTCTTCCAGCAAGATAGGCAGTC Gene GeneID:537027|BUB1B:NM_001145173:178_cdna Constitutive 0 NULL GeneID:537027 10 GENE BUB1B NULL budding uninhibited by benzimidazoles 1 homolog beta (yeast) EMBV3_05918 TGGCCAGTTCTTGATGGCAAGGCTATAAATGGCTTGGTACAGGCCCTCACCCTGGAAATA Gene GeneID:537675|UTP11L:NM_001098092:233_cdna UTR3_Alt 2 NULL GeneID:537675 3 GENE UTP11L MGC138956 UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) EMBV3_29316 CACAGGACGTTATTCTCTACCTTGAGGCTTATCTCCTCCACTGGCAAATATGCGGCACTG Gene BVT0102_101838 + 0 NULL GK000007.2:64065521-64076577 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217448 TCONS_00217446 TCONS_00217445 TCONS_00217449 TCONS_00217447 TCONS_00217450 1 XLOC_131510 Coding TCONS_00217448 XLOC_131510 Coding Coding DCTN4 7:64074391-64107717 j TSS161932 4018 1 TCONS_00217448_1 424 12 0.879789947486872 0.00510480080777443 0.00347654213949059 0.00286581794193542 0.00272024626892282 0.00102252480148727 0.001440378411255 0.00246151233022487 0.00163815344205678 0.00104620643855312 0.00197733566384187 0.00113365146649432 2.83736961114751e-05 4.20681650075074e-05 0.000347833464056545 0.000109492464297697 0.00987547804216068 0.009229277049622 0.00215696240884641 0.00175012411368202 0.00369927234612908 0.000194498794017801 0.00154937240617227 0.00187204404246048 0.00486760718334406 0.00234987405906308 0.000880084140263434 0.00333380584685875 0.00092252658245459 0.000775776879410989 0.00210921650806807 XM_005209611.1 DCTN4 PREDICTED: Bos taurus dynactin 4 (p62) (DCTN4), transcript variant 0.0 4855 100.00 0.66973618715779 NM_016221.3 DCTN4 Homo sapiens dynactin 4 (p62) (DCTN4), transcript variant 2, mRNA. 0.0 2374 79.73 0.66973618715779 TCONS_00217448_1 sp|Q9UJW0|DCTN4_HUMAN DCTN4_HUMAN Dynactin subunit 4; 0.0 857 90.65 0.997641509433962 1 coding 0 0 1 1 -0.0688905960904197 0.546080947524753 0.00515924785984825 0.911486567407119 CTAGGAAAACGCCGGCCCTCGGGTCACGTGATGCGACGGGAGCGTCGTTGACTCCTCCCCCACAAGATGGCGTCCTTGCTGCAATCGGAGCGGGTTCTCTATCTAGTCCAGGGAGAAAAGAAGGTTCGGGCCCCGCTGTCGCAGCTTTACTTCTGCCGCTATTGTAGCGATCTGCGGTCGCTGGAATGTGTGTCTCACGAGGTGGACTCCCATTATTGTCCCAGTTGTTTAGAAAATATGCCATCGGCTGAAGCCAAACTAAAAAAGAACAGATGTGCCAACTGCTTTGACTGTCCTGGCTGTATGCACACCCTCTCCACTCGGGCAACAAGCATCTCTACACAGCTTCCAGATGACCCAGCCAAGACCACCATGAAGAAAGCCTACTATTTGGCCTGTGGATTTTGTCGCTGGACATCTAGAGATGTGGGCATGGCAGATAAATCTGTGGCTAGTGGTGGTTGGCAGGAACCTGAAAATCCTCACACGCAACGGATGAACAAACTGATTGAATATTACCAGCAGCTTGCTCAGAAGGAGAAGGTTGAGCGAGATCGCAAGAAACTGGCACGGCGTAGAAACTATATGCCTTTGGCTTTTTCGGACAAATACGGTCTTGGAACCAGGCTTCAGCGACCACGAGCTGGTACAACCATCAGTACCCTTGCTGGACTTTCCCTTAAAGAAGGAGAGGACCAAAAGGAGATAAAGATTGAGCCAGCTCAGGCTGTAGATGAAGTGGAACCTCTACCTGAAGACTATTATACGAGACCAGTAAATTTAACAGAGGTGACCACCCTTCAGCAGCGCCTCTTACAGCCTGACTTCCAGCCAGTCTGTGCTTCACAGCTCTATCCTCGTCATAAGCATCTTCTGATCAAACGGTCCCTGCGCTGCCGAAAATGTGAACATAATCTGAGCAAGCCAGAATTTAATCCAACATCTATCAAATTCAAAATCCAGATGGTTGCTGTCAATTATATCCCAGAAGTGAGAATCATGTCAATTCCCAACCTTCGCTACATGAAGGTGGTGGTGCCTCCCAAAGAGCTCGTTTTAGCCGGCAAGGATGCAGCAGCAGAGTATGACGAGTTGGCAGAACCCCAGGACTTTCAGGACGATCCTGACATTATAGCCTTCAGAAAGGCCAACAAAGTGGGTATTTTCATCAAAGTGACCCCACAACGTGAGGAGGGCGAAGTGACCGTGTGCTTTAAGATGAAGCATGATTTTAAAAACCTGGCCACTCCCATCCGCCCCATCGAAGAAACTGACCAAGGCACAGAAGTCATCTGGCTCACCCAGCATGTGGAACTCAGCTTGGGCCCGCTTCTTCCTTAAAATGTTCCACTGGCGGGCAGATCCCCAAGGACAGTATCACCACGAACCTGCGTTAAAATGTGGAAGCCGCTGCTTCGTTAGACCTTGTTTATAATGATGTACCATGCACTACTGAGTCCTGTTCTAGCAGGGTGGGCGTGTAGGCAAGGCGTTAGGAACACAGCGACTGCTGTACCTCTGGCTCTCTCCTCTGTTCACACCCGTAAGTCTGTGTCTCCCTCACTGAACCCTGCACGTTGACTCACAACAGCATAGTTCCATCTCAAGAAAGGATGTGGCTGTTCCTTGGAGTGGCATTCAATTGACCACTTGAGAAACTCCATCCTATCTCCCAACCTGATCTCATAAAGGATCAGTCTCACAGATGAAAATGTAAAATAACCAAAAGTTAGACCTGCTATTGATGACCTGGCACTGGTCTCAGTGTTGTACCAACTGCTTTTTGCATTCCACTGGATATACTCTAGCACTCTAAATATATATATCCCTTCCCTTGCCTCCTGGCTTCCATCCATTTGACAGGAAAATAGAATTGTCACGTTGTTTTTAGTTTTGCGATGATTGGAAGGACCTGTGAAATAGTTAAGGCACCTTCATTTGACCTCTTTAAGTGAATGTAGGATACTTATGTATTAGTTGCTGTAAAAATCTTTTTCCCAGCAGAATATGGAACTTTTCTCTTAGGGAAAATTTGAGAAGGAAGCAATTGCATGTCATGTCACTGGGGTGGCAAATTCTATTCATTTTAACTGTTGCCACAATATCCAGGGATTGATGCTGCCACAGGGAGGCATGCTTTATATGTCTTACTCCATACCCCTTCTCCTCTCTGCCTCTTTAACTCAGTAAGTTGTTGAGTATTTGGGACCCAGAAAGAGCCCAAAGAAAACTTGGTGGGCAAGTTCACTTCTGGAATGCAGAAAATATCTTAAAGGTTAGATTTTTATCATGATCTGAGCTAATGTTCTTTCCAGTGATTGAAGAGGAAAGTAACATTTGTAATCTCTTGAATCCAAAACTGGATATTAAGAAAAAACCTTCCTCCTTCCTGAGTTTATGACTTTTATCGTAGGTTTGTCAAATAAGACCATTTTGATCATAAACCATAAAATAGTTCAACAAGCAGCCCAGAATACTTGCCTAACAACACACATGCTGTTTTCACTTGGTATCCTGGAGTTGGCTTGCCAACCTTAGTTTCTGTGATGTTTTCTAAAATGAGACTTGACAAAGTAGACCACCACCTGCACCATGTTTCCATAAATGTATTGTTAGCAAGTGGCCAACAGACTTTTGGGGGAAAGAAATTTCCTGTTTATACCCTGGTTTTGTTTCTAAGTTCAAGCCTTTAGTTTAAAAAAAATGTATATAGCAATTAAAATATAGGACACAGTACTTTTCAGCTCCCCTGGAAAGTAGAAATATTAGGGAAACCTTTGAAGACCACTAAATAGTACTCTTAAGATCAAACCAATATTATGAAACAATATTCCACAGAGTAATATATATGCTGCAGTGTAAGAAAAAAAGAACTCATATCTCTAATATTATGACAGTAGTAAGGCTTAGTCTCTTAGGAGTTGGGGCAGCGTGTTGTATAATGACAAATTTGCAAACTGTAGAAATAGTCCAAGTTTTTGTGACTGTACAAAGTGTCAAATTAATTTCTATTTCACTGCCCGCTACAGCCTGCCGTGACGCCAGTGCCGCATATTTGCCAGTGGAGGAGATAAGCCTCAAGGTAGAGAATAACGTCCTGTGTTTACACGTTTGCACAGACTACACACTGTTAGGCATTTATGGCATATAGCTGGTGTTTGTTCCCAGAAATAACAGTGTTGAAGTAACGGGTCTCATCACCCCCATGTGACACAGAAACACAAAAACACTTTTGATCATAGAATTGTTTCCTCAGAAGCCAAATTAGCTTGCAGAATAACAGAGCTCTTGATTTACTGTTTGCTCGAGATAGTTTTCACTACAGGCTGGTAATTCTGTGTGTTAGGAGAAATGGTTCAATATCTGCAGCTGGTGAATTTGGACTTTTATTTGTTCATTTTTTATATTAGATCAGGTGCAAGATTTTTAAAGTATGGTGAGTGTGTACCACTGCAAGCAAATTAGATGTCATTAGCACTAGAAACTGCAATTTGGGGAACTTAATCTGAATTTGTGATTTGATTGGCCCACTAGAGTTTTCTTTTGTTCAGACTGTTTATAGACTTAATGAGCTAAATGTCACGCATATTTGTAAAGAAATAGACTTTTTGGTCCATTTTGGGAATGAGAGGCACTCCTTGGTCTTTATGAATGACAGGTTACTATTTTGCCTTATTGCTTAACTTCGTGTAGTGAAATAAAGCAGACAAAGCTTGAATGTGTCTTGTTTGGTTTCATGATGGCTGATTGGAGTAGCATGCCAGTGCTTGGGGAGGGTGGAGTCCGCAGTTAGCCTGAGAGTCAGTGGGGCATGCTCCCTTCTCATTTCTTAAAATGAACTAAGGTAAAACCTCAACTTAGTTCACTGTAACATTATATAGGTAGATGTTGCTTGAGCTCCCTATCCCAGAACTGTTGTGTAAATGTTACATTGTTAGGACTCTACCAACTTTTCTCCTGGATCATTGCTTGCAAAGATACCTTTTAAATGTACAAGTAGCCACTCATCCACTTTCAT EMBV3_24863 TTCTGCTGACTGAGGGGAAGAAACCAGCAAAGCCAAAATGCCCTGCCGTGTGTACTTGTA Gene GeneID:617080|LGI1:NM_001046591:249_cdna Constitutive 0 NULL GeneID:617080 26 GENE LGI1 MGC137307 leucine-rich, glioma inactivated 1 EMBV3_35254 GCTGTCAAAGATATAGTGGTTTAGTAAGTTAAAGCCATTTTTAGGTCTACTTTTTGCCTG Gene GeneID:537689|LACE1:XM_002690118:135_cdna Constitutive 2 NULL GeneID:537689 9 GENE LACE1 NULL lactation elevated 1 EMBV3_23357 AGTAGTCGATATCCTTTTGACTCTCCTCAGAGACGACCACCAGATAATTCTTTTTATGTT Variant GeneID:613423|UBE2W:NM_001099122:64_cdna 198^353 1 EMBV3_30751 GeneID:613423 14 GENE UBE2W MGC165835 ubiquitin-conjugating enzyme E2W (putative) EMBV3_23184 GTGGGAAATTTTCATCAAAGGGATCTTTGATTGCCAGTTCTTCCCTGGGATTTTGTGATG Gene GeneID:540781|TBCEL:XM_002693032:263_cdna Constitutive 2 NULL GeneID:540781 15 GENE TBCEL LRRC35 tubulin folding cofactor E-like EMBV3_10820 GTTACTCTAATATCCTCAGGGGAGGCAGAACTTTGTAGTCTCTCTCTAGTCCCTGGAGGG Gene GeneID:540014|ZNF134:XR_083961:261_cdna Constitutive 0 NULL GeneID:540014 18 PSEUDO ZNF134 NULL similar to zinc finger protein 134 EMBV3_06552 ACAGGACACAGGAAAAAGGGCATTTAGGGAAGAAAAAGGATATTTTGGCTGCAGAAAGGG Gene GeneID:533661|TMEM173:NM_001046357:8_cdna UTR3_Alt 2 NULL GeneID:533661 7 GENE TMEM173 MGC137640 transmembrane protein 173 EMBV3_35033 AGGCAGATCCAGAAAAAGTGCATCTCACCTGGACCAAGGACAAGTCGGTGGCAGAGAAGA Gene GeneID:510157|SLC12A5:XM_002692486:578_cdna Constitutive 0 NULL GeneID:510157 13 GENE SLC12A5 NULL solute carrier family 12 (potassium-chloride transporter), member 5 EMBV3_15019 GAGATAATGAACAGGGAACCTGGTGTGTTACAGTCCATGGAGTTCGCAAAGAGTGGGACA Gene BVT0102_214970 + 0 NULL GK000002.2:27309229-27317637 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02819 GCGTTGCCCCACATTGAGGAAGAAGGCCAGATTTAAGAGAAACAAGCTGATGCTCAGGGC Gene BVT0102_082864 + 1 EMBV3_08419 GK000018.2:25723494-25761282 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082702 TCONS_00082701 TCONS_00082700 TCONS_00082703 1 XLOC_051084 Coding TCONS_00082701 XLOC_051084 Coding Coding - 18:25744496-25756380 - TSS62334 3492 1 TCONS_00082701_3 192 0.234249713631157 8 0.706808045106455 1.24897760125406e-16 1.13021711982008e-10 0.00069392159023856 0.000524804182779957 8.88355968685049e-05 5.12163506883714e-05 0.000256345934565509 4.13084850140105e-05 0.000672958154799302 2.35600098556694e-14 6.94310469022699e-20 1.72552448059123e-10 3.04006836946394e-05 2.02608687303086e-05 3.33346164920731e-05 0 0 0 0.000250947881835354 4.9608856649023e-05 5.41127191622109e-18 2.75579873238406e-17 4.47188206545832e-10 1.14867808129876e-14 9.45804134598996e-05 9.81291023077447e-05 2.13457762031265e-16 2.15928692356135e-11 6.55969945686301e-13 2.75525375520555e-12 XM_005218809.1 GPR97 PREDICTED: Bos taurus G protein-coupled receptor 97 (GPR97), mRNA. 0.0 2554 100.00 0.405211912943872 NM_170776.4 GPR97 Homo sapiens G protein-coupled receptor 97 (GPR97), mRNA. 0.0 771 71.92 0.424971363115693 TCONS_00082701_3 sp|Q8R0T6|GPR97_MOUSE GPR97_MOUSE Probable G-protein coupled receptor 97; 4e-87 270 68.23 0.994791666666667 1 coding 1 1 1 1 0.0557480871476321 0.657897108879777 0.0393106167286931 0.620910114773531 GGGGCTCCCTGCTCAGCCGGGAGGACGGCAGCAGAGTGTTGAACAATCGCATAGTGGGCTTGACTCTGGGTCACATAAACGTCACCGAACTGGCTGAGCCTTTGGAGATCACCTTCTCCCACCAGTACCAGCCCCCCAACATGAACCTCAGCTGTGAATTCTGGGATGCGACTAAAGGAGACTGGTCTTCCAAGGGCTGCTCCACAGAGGTCGGAGTCCGCAGGACTGTCTGCCGCTGTGACCACCTGACCTTCTTCGCCCTGCTGCTGGTTCTCCCGGCAGAGGTTCAAGTCTGAAGACGCCCCCAAGATCCATGTGGCCCTGAGCATCAGCTTGTTTCTCTTAAATCTGGCCTTCTTCCTCAATGTGGGGCAACGCCTGAAGGGGTCCAACGCTGCCTGCTGGGCCCGGGGGGCCGTCTTCCACTACTTCCTGCTCTGTGCCTTCACCTGGATGGGCCTGGAAGCCTTCCACCTCTACCTGCTTGTCATCAAGGTCTTTAACACCTACTTCAGCCACTACTTTCTGAAGCTGAGCCTTATGGGCTGGGTCCTGCCTGCCCTAATAGTCATCGGTACTGGGATCGCCAACAGCTACGGCCCCTACTGCATCCGTGATGAGAAGAACGTCATCACACTGGAGCTGTGCTGGTTCCGTGAGAAAACTGCCCTCTACGTCACCGTGTACGGCTACTGCCTCATCATTTTCCTCTTCAGCGCGGTGATCCTGAGCCTGGTGTCCTGGAAAATCTTTACTCTGTCGAGTGCCACAGCGGGCAAGGAGAAGGGGCAGCACTGGAAGGGGGTCCTCACCCTGCTGGGCCTCTCGTGCCTGGTGGGCCTGCCGTGGGGACTGGCCCTCCTCACGTCCCTGGGCCAATTCACGGCCTATGTCTTTGCACTGTTCACCTCTCTGCAAGGTGTCTTCATCTTCTGCTGGTTCATTGTCCTCTACTGCCCAAGCCAGAGCACCGTGACCTCATCTTCTGGCACTGCCCGGGTTGACCATGCCCAGACCGTGTCTCATGAATAGAGGAAGGCCATGTGGCCAGGCCGGGCCCGCCCTGCACTCTGGACTCAGCTCTAATTCGCCGTGTGACCTGGGGGTGGCGGGGAGGGGGTGCCTGCCTCCTGGGCCTCAGCGCCTTTCTCCGCACAATGTGACTGGGGAGCCAGGGGATGGGAAATATGTTGGGCCATGTTGTCTCAAAGGTCTTATTCAGATACACCTACGGGTCTGAGAGTTCACAGATCCAGGACGGCAAGAGTCTCAAGTCCCTGTGATCCTGAGACCCCTGCCGGTACAAAGTGACACCCTCACCCTGCCCCCACACCCACCACCCGCCCTCAGAGCAAAACGGCCTTCTAGTCTCAGAAAGCCTGAGTTCCAATAAGGAGGTCGGTCCTTGCCAGTTGCTCCCCTTCCTCCCTTCCCCTCATCACTGCCCTCCCACAGCTCCATCCTTGGGCCGCCTGTACCTGAGGGGACACTCAGGGCCACCGCCCGCTCAGGCGTGGGGGGCTCTTGTGAACTGGAGGTTTGTTTTGAGGGGGTGGGGGGGTTGCTCCTCCTCTGGTCTCACCTGGTCTCAGCCACTCTCTCCAGGGCCCATCGTCACAGAGGTCCCCTTGCCGCTCAGGGGCGCTGGGAGCCCCTCAGGTGCTGGGGACCCTGAATATCAAGAAATGCCACTTACTCAATAGGTGGGCTACCTCAAGCAGTCCCCAGTTCCACCTCTGACTGCCTCACGGGTGGCCCTGATACCGACCAGGGTCCTTGGCCTTTCTCAATCAACAGACATTGATGGGAGGCCAGACGAGAAATTCAGGCAAGGCTTTATTGGGGCCCCTGCTGCAGAAGGGGAAAGTGAGAATTAACAACAGGTTGCCTTGCTTGCTCACTCCCTGAGGGCAGGGGTGGTGAAGCCGATTCCTTTCATGGGGTGAGGGTAGGGATATGTCCAGGGGTTTGGCTGGAAGCCTAGCTTAGGTGGTTTGCCCATCCTTCTGGTGGTGCTGAGTACAGGGGGCATGCACAGTACCCAGCTTTTTTCCCTCAACACCCTGTTTTTATTCCTGGCTCTTCAGAAGTGGCATTAGGGACTTTTTTAGTTTTTTGTTTTGTTTTGTTTCTTTTGTCCAGAATTGGCCCAACTGCACATGCACGCAGTTATTTCTAGTCCCATATAGCTTCTCTGCATTTTGTTGCTGGAGAAGAGGTCTGCCCAGGTTGCAAACATTGCAGCAAAGGGTCCCAGGTCCCAGCAGGTCTCAGGTGGACTGACCTCTGACCTGCTGTCTTGGTGGGGGTGGAGGGCATAAGGTTCAGGGCTCAGCACACCTGAGGGCTGAGGAGCCAGTGCGGGGGGAGGGGGTTGTGAACAGAGAGAGGATGGACATTTCTTCTGGCATCCAAGCTCCCATAGTGCCAGGGGAGTGCCTCAGGCCAGACCCAGCTGGGTTTGTCACTTCCAGTGGCTGGGCTTGGTTTTGAAACCACTGGTTTCCTCAGTAGGAAACAAAAAAGAGGCAGAGACAGTAGAGATAGACACGGATATAGAGAGATGGAGAGATAGAGAGAGACAGAAAGATAAACCGAAAGAAAGATGAACAGATAAACTGACCCAAAGAAAGAAAACAAAAGGAGAGATAGACAAATGCAGGGACACGCTGGCCTCCTGGGCCGGCCCGACCAGGAGGGCAGGGCGCTGGCGTCCACCCCTCTCTTCTGCCCTACACTGCACCTCACCCAACTTACTGTTCAGCCTCACTCTTCAACCCCCACCCTCCCCAGTGTGCTTTGCAGAAAGTCTAGCACCTTCCGCAGGTGAGAAGTTATTATTATTAGAGCCTCACTACAACCCCTGGCTGCCAGTCAATTTGCTCCCCACAAATGCCCTGGACTTGGATTTCCCTTCTCCCTCCTCCCACTCAGCAAACAGATGAAAGAAAGGAAGCCCAGGACCCTGGCTTTATGCAAATCACTGTGTTCCTAGAAGGGAAATCTTAAGAGTGTGGACACTGCAACAGTTGAGCCACGTTATCAGTTTTTGGGGACAAACTTGGTGGGTTTCAGGGCTTATCTTCATAGACATCTGTTTCTCACACTGAAGTTCTCAGCAACCTTACCCCAAAGTCTCAGAGCTAGTAACCTGTCCTCAGGAAGAATGGCTGCTTCAGTGTCTGACAGGCCTGGCTTCAAATCCTAGCTCTGCTATTTAGAGGCTGGGTGACCCTGAGCCTGTCACCACACCTCTCTGAACCTCAGATTCACCCTACGTAAGATGGGGCTTGTTGAGTCTTATGTGTGCACGCTCAGTTGCTCAGTCATGTCCACCTTTTTGCGACCCCATGGACTACAGCCTGCCAGGCTTCTTGGTCTATGGGATTTTCCAGGCAAGAATACTGAAGTGGGTTGCCATTTCCTACTCCAGGGGATCTTCCCAACCCAGGGATCGAACCTGGGTCTCCTACTTTGGCAGGTGAATTTTTT TCONS_00082704 s 5' 4903 TCONS_00082704 s 5' 16786 EMBV3_39291 GTATAGATTAGAGTGTTGGGTGTGTGAGGGTATAGGGGAGGCAGTAAGGGTAGGTGTGTG Gene GeneID:509006|LOC509006:XM_002689055:29_cdna Constitutive 0 NULL GeneID:509006 7 GENE LOC509006 NULL similar to Mhc class I heavy chain EMBV3_42900 CGGACGCGCTTTTAGAACCTACGTTTTCTGCTGCCAATCTCGATATTCTCTTTTGAATAA Gene GeneID:510084|ANKRD10:NM_001101921:51_cdna Constitutive 1 NULL GeneID:510084 12 GENE ANKRD10 MGC151663 ankyrin repeat domain 10 EMBV3_37750 AGGGCTCAGGAAGAGGCTAAAGAAGCAGAAATGAGCAGGAAGGAGTTGGGGCTTGATGAA Gene GeneID:510898|DNAJC9:XM_002698876:488_cdna Constitutive 0 NULL GeneID:510898 28 GENE DNAJC9 NULL DnaJ (Hsp40) homolog, subfamily C, member 9 EMBV3_06630 TTTCTACGGCCACCGCCCGGTCATATTTGGTGCCTGAAGGAGGAGACAGAGTGACAGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25882 GTACATAAGTAGACATCACCTGGGGAGCCTTTCAAAAATAGAGATCCACCAGCTCTCTGG Gene GeneID:539276|HTATIP2:NM_001040563:39_cdna Constitutive 0 NULL GeneID:539276 29 GENE HTATIP2 MGC129016 HIV-1 Tat interactive protein 2, 30kDa EMBV3_28322 GACCGAACCTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACTGAAA Gene GeneID:540045|ZNF385A:XM_002687211:79_cdna Constitutive 0 NULL GeneID:540045 5 GENE ZNF385A NULL zinc finger protein 385A EMBV3_04747 GGGTCCATCTCTTCTCACCTCCTTCCTAGTCAGTATATACAGCAAACATTTACTGAGCCC Gene GeneID:768310|FUSIP1:NM_001078126:305_cdna UTR3_Alt 4 NULL GeneID:768310 2 GENE FUSIP1 MGC128430 FUS interacting protein (serine/arginine-rich) 1 EMBV3_34734 GGCCAGGAGGTCTCTGGAGAAGGAGAAAAGCAAGAGGACCAAAGTACAAGGCTGTTTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18437 TTTGCAGGTAGGCGCACCCCTGTGTGCATCCTCGCCTCTTGTATCCTGTATCTTGAATCT Gene GeneID:100297452|LOC100297452:XM_002695709:314_cdna Constitutive 0 NULL GeneID:100297452 19 GENE LOC100297452 NULL hypothetical protein LOC100297452 EMBV3_29356 GAAAATCTGGAGATAAACCCATGTATCTGTGGTCACCTAGTCTATGGCAGAGGAGGCAAG Gene BVV0102_151048 + 0 NULL GK000021.2:41804342-41947357 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33327 AGCAGGAGTGTGGTGGAGGTGCAGAAGGAGGTGAAACTACAGAAGTCAACAGAATCCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23517 GGGGAGGGGAGGAAGACACTGGGAATGCTCACATTGCTACTAACATTTTTAAAACTAACA Gene GeneID:507294|DUSP14:NM_001075308:221_cdna Constitutive 0 NULL GeneID:507294 19 GENE DUSP14 MGC139770 dual specificity phosphatase 14 EMBV3_02085 CAAGCCTGTGTACAACTGGATCCGCCTTGGAGCTTCTCCTACACCTTCTCCTGGCAGCAT Gene GeneID:616943|VSIG2:XM_002699212:118_cdna Constitutive 1 NULL GeneID:616943 29 GENE VSIG2 NULL V-set and immunoglobulin domain containing 2 EMBV3_03942 ATTCAATGAAGCCCACTACCCTGACGTCTATGCCCGGGAGATGCTGGCCATGAAAACGGA Gene GeneID:528647|VSX2:XM_002691006:325_cdna Constitutive 0 NULL GeneID:528647 10 GENE VSX2 NULL visual system homeobox 2 EMBV3_11991 GTCCGACGTGGACCAGCGCTGCCTGGACAGGGCCTGTTCAGAGCAGCAGGACACCTGCTC Variant GeneID:514636|C25H16ORF13:NM_001038106:165_cdna 379^541 7 EMBV3_22773 GeneID:514636 25 GENE C25H16ORF13 MGC134534 chromosome 16 open reading frame 13 ortholog EMBV3_32999 CCACAGTTGCCCCAACAGCTTCACCAATAGAGCAGACAGCAGTGCAAACCATCAATGAGA Gene BVT0102_311882 - 1 EMBV3_12595 GK000008.2:100399093-100408406 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00795 GCCAGGAATCAATTCTGAAATGCGGCATCAATTGCACAGACTTCCACTTAGTTTTAGTTG Gene BVV0101_023642 - 1 EMBV3_02226 GK000010.2:69777696-69862216 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39042 TCCACTTGTCCAGGAAACCCAAACCATGAAGCACCATTTCATCTGTCTCCCCACAAACTG Gene GeneID:617797|SH3BGR:XR_083589:56_cdna Constitutive 0 NULL GeneID:617797 1 PSEUDO SH3BGR NULL similar to SH3 domain-binding glutamic acid-rich protein (SH3BGR protein) EMBV3_25717 CATGACTGAGCAACTAACCACACAGGTTCACTCAAGTTACACAGCTCTGCAAACTGCAGG Gene GeneID:529878|CCDC69:XM_002689310:183_cdna Constitutive 0 NULL GeneID:529878 7 GENE CCDC69 NULL coiled-coil domain containing 69 EMBV3_11246 AATGGTAAGACGTGAGGATTTATGAACGGGTCTTGCCTTCTTTCACCCAGGGAGCCACAG Gene GeneID:509239|TMCC3:NM_001038063:28_cdna Constitutive 0 NULL GeneID:509239 5 GENE TMCC3 MGC134558 transmembrane and coiled-coil domain family 3 EMBV3_00926 GGTGGACATCATCCAGCAGAACAAAGAGAGGTGGAAAGAGTTAGCTGCTCAAGGTGAACC Gene GeneID:281969|PDE1A:NM_174414:5_cdna UTR3_Alt 2 NULL GeneID:281969 2 GENE PDE1A PDE1 phosphodiesterase 1A, calmodulin-dependent EMBV3_32191 CTCAGTTTTCATGGGCATCTTTGCATGAAGAAAGCGGAAGTTTACATGAAGTGATATTGC Gene GeneID:537171|DGKB:XM_002686677:75_cdna Constitutive 0 NULL GeneID:537171 4 GENE DGKB NULL diacylglycerol kinase, beta 90kDa EMBV3_36620 GGGCAGGGACCATGGCGGTGGAGTTAGAGGTGCCCCCACACCCCCCTCCTGCCGCTATCG Variant GeneID:509188|WBP1:NM_001034346:14_cdna 74^724 2 EMBV3_40332 GeneID:509188 11 GENE WBP1 MGC128715 WW domain binding protein 1 EMBV3_15378 AGAGGAAGAGTCCCCGACTGCCGAGAATGCCAGGCTCTTAGCCCAAAAAAGAGGAGCTTT Gene GeneID:507924|LAS1L:NM_001076815:112_cdna Constitutive 0 NULL GeneID:507924 X GENE LAS1L MGC151516 LAS1-like (S. cerevisiae) EMBV3_37592 CGGTCTCCGTTCCGCCCTTTCGGGAAGCAGAGGGATGGATTCGTTCAATCCGCTCCCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16976 TACGAACCACCCAGACCTGAAGAAGTTGCTGCTCTGAAACAGAAGCTGGAGAGGTGTCAC Gene GeneID:615512|CCNH:NM_001079788:18_cdna Constitutive 0 NULL GeneID:615512 7 GENE CCNH NULL cyclin H EMBV3_15853 GTCTGCTTGGCTAGAAGTTCAGGTGCGTCAGTTACTACAAATGGCTAACCAGCAACAGAG Gene GeneID:507234|TRAF5:NM_001105340:45_cdna UTR3_Alt 2 NULL GeneID:507234 16 GENE TRAF5 NULL TNF receptor-associated factor 5 EMBV3_33395 CCGAAACAGCGGATGACACAAAACTATTGGCGTGACTAAATGGTGACAGGTAGCTGGGAC Gene GeneID:510359|TSC22D1:NM_001034377:85_cdna UTR3_Alt 1 NULL GeneID:510359 12 GENE TSC22D1 MGC128409 TSC22 domain family, member 1 EMBV3_02247 GCTCACATCTTTCCAATTGTGTCATCCAAACTGCTGGGAAGGAGGGGTGGGCATCCTCTT Gene GeneID:515135|CDIPT:NM_001034482:332_cdna Constitutive 1 NULL GeneID:515135 25 GENE CDIPT MGC127038 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) EMBV3_10960 TCTTGGCTGTCTGTGTCCTTCTTCTTTGCTCCTGGCCTCGGCTGTGGGATGAACTTTGTT Gene BVT0102_102175 + 0 NULL GK000009.2:88385091-88473197 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36480 CACTTTAGCAAAGGGTCATGAAGTCGATGTACTTAATTCATCAGCAGTGTGCTTCAGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06170 CAGCCTAAACACAGACCTTGTTGCTCTCTTGAATCCAAACCTGAGTCCTGGCGTGGCTCT Gene GeneID:522301|LOC522301:NM_001077949:58_cdna Constitutive 0 NULL GeneID:522301 3 GENE LOC522301 NULL hypothetical LOC522301 EMBV3_40935 GGTGCTGACCTCCTTCGGAGAAGCTATTAAGAATTTGGACAACCTCAAAGGTGCCTTCGC Gene GeneID:539994|HBE1:NM_001110507:356_cdna Constitutive 0 NULL GeneID:539994 15 GENE HBE1 NULL hemoglobin, epsilon 1 EMBV3_26834 CATGTAGCATATAAATGTTTATATTGTTTTTATATATTATAAGTTGACCTTTATTTATTA Gene GeneID:532393|NTF3:NM_001077988:35_cdna Constitutive 1 NULL GeneID:532393 5 GENE NTF3 NT-3 neurotrophin 3 EMBV3_01810 AAGACAGAAATGGTATGGACCTAACAGAAGAGGCATAAGATATAAAGAAGAGGTGGCAAG Gene BVV0102_024737 + 1 EMBV3_10458 GK000030.2:44948850-45641082 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131278 1 XLOC_079983 Coding TCONS_00131278 XLOC_079983 Coding Coding - 22:47573955-47574715 - TSS98145 760 1 TCONS_00131278_1 119 0.996052631578947 1 0 0 0 0 0 0 5.22961592859875e-07 0 0 1.03817558468215e-05 0 0 0 0.000742803336955999 6.18946551909556e-06 5.86865937577861e-07 3.47520880674858e-05 2.42723520072591e-06 0 0 9.46241307943774e-06 0 0 1.50888878732269e-06 0 0 0 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 699 87.57 0.734210526315789 0 coding CTTCCTCAGTGATCAGTGCAAAGAAATAGAGGAAAACAACAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATAGACCTAACAGAAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACGGAAGGACTGTACAGAAAAGATCTTCATGACCCAGATAACCACAATAGTCTGATCACTCACCTAGAGCCAGACATCCTGGAATGTGAAGTCAAGTGGGCCTTAGGAAGCATTACTATAAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTTCAAATCCTAAAAGATGATGCTGTGGAAGTGCTGCACTCAGTTTGCCAGCAAGTTTAGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGCTCAGGTACTACACAACTGCACTCAAACACTAGCAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGTAGTACTTGAACTGTGAACTTCCAGATGTTCAAGTTGGATTTAGAAAAAGCAGAGGAACCAGATATCATTGCCAACATCCGCTGGATCATCAAAAATGCAGGAGAATACCAGAAAACATCTACTTCTGCTTTATTGACTATGCCAAAGCCTTTTACTGTGTGGATCACAATAAACTGTGGAAAATTCTTCAAGAGATGGGAATACCAGAC TCONS_00126967 . 5' 6761 TCONS_00126967 . 5' 6761 EMBV3_30971 AGCCTACCCTCTATTATCTTCACCATCAAAAGCAACAACTACCGAGTGCCAGGTCAAGCC Gene GeneID:337898|PAG4:NM_176615:117_cdna Constitutive 0 NULL GeneID:337898 29 GENE PAG4 NULL pregnancy-associated glycoprotein 4 EMBV3_08403 TGTACACTCGTGCTCTCGTAGCTTGCTCAGAAAAAATATGAAGACGCATTGTTCCCTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15451 CTGCTTAATTGTATCCAAGATACAATGAAGCGTGGGGTATCTAGCAGGACGTCTAGTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29508 GACATCACAGCCAGGGTGAAGTCCATCAAGGTGGGAGACTGCAAATCTGAAGATGAAGTG Gene GeneID:280958|VWF:XM_002687894:95_cdna Constitutive 1 NULL GeneID:280958 5 GENE VWF NULL von Willebrand factor EMBV3_30249 TCTCTGTGTCCCTGCTGTGTTCTCACCTGAACATCCCCACAGCTCATGAAGATCATGTCT Gene GeneID:100270756|LOC100270756:NM_001145202:859_cdna Constitutive 1 NULL GeneID:100270756 5 GENE LOC100270756 OCC-1 hypothetical protein LOC100270756 EMBV3_22396 GCGGGGATAAGGGAGTCCCAGCCCTGTGCCCCTGAGAAGCCACGACCATCATTGAATAAA Gene GeneID:508088|NDE1:NM_001100321:332_cdna Constitutive 2 NULL GeneID:508088 25 GENE NDE1 NULL nudE nuclear distribution gene E homolog 1 (A. nidulans) EMBV3_40994 GGCCCTTCCGACAAGGCTATCAGCCCCTAGCCACCCAGATAGACCCAAGTGACCTCCAGG Variant GeneID:535306|TSNARE1:NM_001082446:116_cdna 165^782 1 EMBV3_17877 GeneID:535306 14 GENE TSNARE1 MGC148885 t-SNARE domain containing 1 EMBV3_23671 AGGTTCTACCAAGACCAAGCAGGTTATAAAGAAAACTCTGGAATGCTGGGGAAAATGTGG Gene BVV0102_247934 + 0 NULL GK000002.2:65913738-66103780 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10091 CTGACCCCTCTCGTGGCCGAATCCAAAGTACCTCTTCCTTTACCGTTTACACCCTACCTT Gene GeneID:281543|TPI1:NM_001013589:9_cdna Constitutive 0 NULL GeneID:281543 5 GENE TPI1 NULL triosephosphate isomerase 1 EMBV3_23121 CGACGGGCTGAAGCTGAACAGCGTGAATCAGTATGTGTGCGACCCCGTGATGGGAGACCA Variant GeneID:514168|PDXK:NM_001075651:42_cdna 404^502 1 EMBV3_36067 GeneID:514168 1 GENE PDXK MGC152058 pyridoxal (pyridoxine, vitamin B6) kinase EMBV3_22628 CCTGGGGTCTCTGCCTCTGCCTGTAGATCCTGGTGTGACTTCATTTTCTCAAGGTTCCTA Gene GeneID:614056|SGOL1:NM_001081617:10_cdna UTR3_Alt 2 NULL GeneID:614056 1 GENE SGOL1 MGC155146 shugoshin-like 1 (S. pombe) EMBV3_12749 GCTGTCAACACCTTTAAGAAAGTTAGAACCCATTGTCTGTTGCCATGCAGAATACCATCT Gene GeneID:538904|LOC538904:XM_002699034:50_cdna UTR3_Alt 1 NULL GeneID:538904 29 GENE LOC538904 NULL similar to Density-regulated protein EMBV3_34320 GGGGAATGGCATTGCACTGCTAGCTGGAAGGTCAAGAGGACAACGCTGGTGGACAGCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12366 TCCTGCTCTTCTCGGAGTGTAGTGGAGAGTGATGAACTTTAAGAATGTCTGGGTGCCTGC Gene GeneID:527123|MYPN:XM_002698857:434_cdna Constitutive 0 NULL GeneID:527123 28 GENE MYPN MGC160025 MYOP myopalladin EMBV3_41485 CATCTTGTCACTGGTTCTGTTCAAGCCAAGTCTTTGGAGCCACTGTTGAAAACCCTAAAA Variant GeneID:540184|MGC159550:NM_001110083:109_cdna 391^463 2 EMBV3_40907 GeneID:540184 10 GENE MGC159550 NULL hypothetical LOC540184 EMBV3_40055 CCCCTGCAAAAGTGACAACAACCAGTTCCAAAACTGTCATCAGGAGTCTGGAAACACGGG Gene GeneID:782903|GAS2L3:XM_002687631:777_cdna Constitutive 0 NULL GeneID:782903 5 GENE GAS2L3 NULL growth arrest-specific 2 like 3 EMBV3_04093 CATATGATGCTTTTGTGTCCTACCTGAAAGAGTGTCAGCCCGAGCATGGAGAGGAACACG Gene GeneID:407221|IL18R1:XM_002691182:83_cdna Constitutive 0 NULL GeneID:407221 11 GENE IL18R1 IL-18Ra interleukin 18 receptor 1 EMBV3_08102 TGCTGGACTACGTGGAGCCTTCCCCCCAAGGGCGACGCTGGCGGACGCTGTTCAGAACCA Variant GeneID:282389|TXNRD2:NM_174626:22_cdna 128^269 1 EMBV3_38621 GeneID:282389 17 GENE TXNRD2 NULL thioredoxin reductase 2 EMBV3_12558 CTTTACATCATCTACATACAAGATGAATTATCTGTCTTGGCAGTGTCTCCATCAACGTTG Gene BVT0102_040146 + 0 NULL GK000015.2:2001674-2114095 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062814 1 XLOC_037541 NonCoding TCONS_00062814 XLOC_037541 NonCoding NonCoding - 15:2006337-2007399 - TSS46557 1062 2 TCONS_00062814_2 83 0.992467043314501 1 0 0 0 6.09962884761859e-05 0 0 0 1.6473749523059e-05 5.06310177093772e-07 7.42950228452106e-05 2.32457467326827e-05 5.60439663334217e-05 6.32420951439095e-05 0 6.20111931856301e-05 9.75284379505094e-05 0.000696351832644542 0 0.000567026353360558 6.75229876654023e-06 0 0 0 0.000233238828790687 0.000299932376256655 0 0 0 9.04442118778294e-05 4.72356645348381e-05 7.64268739993199e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 940 91.82 0.61864406779661 0 noncoding 0 0 0 0 -0.184058866550785 0.245015234288532 0.0192517651878317 0.742431115901108 GATCATGGCATCTGGTCCCATCACTTCATGGGAAATAGATGGGTAAACAGTGGAACAGTGTCAGACTTTATTTTTTTGAGCTCCAAAATCACTACAGAATGTGACTGCAGCCATGAAATTAAAAGACGCTTAATCCTTGGAAGAAAAGTTATGACCAACCTAGATAGCGTATTGAAAAGCAGAGACGTTACTTTGCCAACAAAGGTCTGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGAGAGTTGGACGTGAAGAAAGCTGAGGACCCAAGAATTGGTGCTTTTGAACTGTCGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGACCCAACAAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGAAAGGAATGATGCTAAAGCTGAAACTCCAGTACTCTGGCCACCTCATGCAAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAAGGGACAACAGAGGATGAGATGGCTGGATGGCATCACCAACTCGATGGACATGAGTCCAAGTGAACTCCGGGAGTTGGAGATGGACAGGGAGGCCTGGCGTGCTGCAATTCATGGGGTCTCAAAAAGTCGGACACGACTGAGCAACTGAACTGAATTGATTATGTTCTGTATTCTTACAATAGAGTAAGCTGGAGAAAAGAAAATGTTATTAAGAAAATCATGAGAAAAAATACATTTAGCAGTACCACATTGTATTTATCTATACCTTAACTTTACATCATCTACATACAAGATGAATTATCTGTCTTGGCAGTGTCTCCATCAACGTTGTCTTATATGATAGAAATCACTGTAGATGTTGTATGTATTAGTACTGGATATCAAAAATGTAATATGTGAAAAATTAATTTATGGGTATAATGATTCATGTATTGAAATTATGTGAAAAATTAATTTATAGGTATAATGATTCATGTATTGATAATAAAGAAGGAGCAATGTGATTGCTTTATGCTAGCTTAGTGTAATCAATATAATTACTTCATGGTAGTCTAACC TCONS_00058255 TCONS_00058257 TCONS_00058256 . 3' 4665 TCONS_00058255 TCONS_00058257 TCONS_00058256 . 3' 5726 EMBV3_05555 ACCAGGGGCAGAGCCAGGATCCGAAGTCAGATATAACCACCTTCCGGAATCATCTCCCTC Variant GeneID:515225|GHDC:NM_001075703:142_cdna 181^455 1 EMBV3_00978 GeneID:515225 19 GENE GHDC D11LGP1 GH3 domain containing EMBV3_20639 CGCACCAGGTCTTGTAGCAGCGCCTCCTCGATGAGATCGTGGGGAACCTGGGTGAAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00501 CCGATCCTGGAAGTGTCTGTGAGCTTCCATAAATAACTTTAATTTTAGCATAATGACTGC Gene GeneID:504831|CNBP:NM_001034224:8_cdna Constitutive 1 NULL GeneID:504831 22 GENE CNBP MGC127608 CCHC-type zinc finger, nucleic acid binding protein EMBV3_37112 AGGACCTTGTCCTGCAGAACTCGGCCGCAGGAACCAAATACCAGGCCATGCTGAGTGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16894 AGATGTGCCCGTCCCAACTGGGGGTGGTGAAGGGAGAACAAGGAGAGGACAAGAATTAAA Gene BVT0102_269737 - 1 EMBV3_16116 GK000004.2:29575558-29595418 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183519 TCONS_00183518 1 XLOC_111165 Coding TCONS_00183519 XLOC_111165 Coding Coding SP8 4:29593436-29597808 = TSS136914 3371 1 TCONS_00183519_3 462 2 0.229238160603981 2.02275841112702e-05 1.48363073854136e-05 0.000107924339723926 2.85379900408479e-05 5.12332574304009e-05 5.42038427422681e-05 9.32684344644871e-06 5.5017666497532e-12 2.57025475195777e-05 0.00016247126748745 1.97565077652221e-10 8.66739425796454e-06 1.26965385283325e-05 8.93512512873545e-05 1.26443095345773e-05 7.69723354300128e-05 2.3606696442623e-11 3.59186024639197e-11 1.87507814166634e-05 0.000208330621632849 1.47068179665906e-06 0.000134791000714576 3.17007184625724e-05 3.47219318248041e-05 8.53649879864772e-05 8.44278365891886e-05 1.72652718512968e-05 6.26329361417055e-05 4.37314736246527e-11 0.000106382763513137 XM_002686706.2 SP8 PREDICTED: Bos taurus Sp8 transcription factor (SP8), mRNA. 0.0 5627 100.00 0.925244734500148 NM_198956.2 SP8 Homo sapiens Sp8 transcription factor (SP8), transcript variant 2, 0.0 3555 85.54 0.924058142984278 TCONS_00183519_3 sp|Q8IXZ3|SP8_HUMAN SP8_HUMAN Transcription factor Sp8; 0.0 716 88.37 0.958874458874459 3 coding 0 0 0 0 -0.243690072335923 0.309289568847371 -0.0701538049882188 0.233040386892056 ATGGCAACTTCACTTCTAGGGGAAGAACCGAGGTTGGGATCGACTCCTTTGGCCATGCTTGCTGCTACCTGTAATAAGATCGGCAGCCCCAGCCCGTCTCCCTCCTCCCTCTCGGACAGCTCATCTTCCTTCGGCAAAGGCTTCCACCCCTGGAAACGGTCCTCGTCCTCTTCCTCAGGCAGCTGCAACGTAGTGGGCTCCAGTCTCTCAAGCTTCGGCGTGTCAGGGCCCTCCAGAAACGGCGGCTCGTCCTCGGCCGCGGCGGCGGCCGCCTCGAGCTCTCCCTTCGCAAACGACTACTCGGTGTTCCAGGCCCCTGGCGTGTCGGGGGGCAGCGGCGGCGGCGGTGGCGGCGGCGGCTCCTCGGCACACTCGCAGGACGGCTCCCACCAGCCCGTGTTCATCTCTAAGGTGCACACCTCTGTGGACGGGCTGCAGGGCATCTACCCGCGCGTAGGCATGGCGCACCCTTACGAGTCGTGGTTCAAGCCCTCGCATCCCGGCCTGGGCGCCGCCGGCGAAGTGGGGTCGGCAGGCGCCTCCAGCTGGTGGGACGTGGGCGCGGGCTGGATCGACGTGCAGAACCCGAATGGCGCGGCGGCGCTGCCCGGCTCCCTGCACCCCGCCGCCGGGGGGCTCCAAACCTCGCTGCACTCGCCGCTCGGAGGCTACAACTCGGATTACTCAGGCCTGAGCCACTCAGCCTTCAGCAGCGGTGCCTCTTCGCACCTGCTCAGCCCCGCGGGGCAACACCTCATGGACGGCTTCAAGCCAGTGCTGCCCGGCACCTACCCGGACTCGGCCCCGTCGCCGCTGGCCGGCGCTGGGGGCTCCATGCTGAGCGCGGGGCCGTCGGCGCCTCTGGGGGGCTCCCCGCGCTCTTCAGCCCGCCGCTACTCCGGCCGCGCCACCTGCGACTGCCCCAACTGCCAAGAGGCGGAGCGTCTGGGCCCGGCCGGGGCGAGCCTGCGGCGCAAGGGCCTGCACAGCTGCCATATCCCGGGTTGCGGCAAGGTGTACGGCAAGACGTCGCACCTCAAAGCGCACCTGCGCTGGCACACGGGCGAGCGGCCCTTCGTGTGCAACTGGCTCTTCTGCGGCAAGCGCTTCACGCGCTCCGATGAGCTTCAGCGGCACCTTCGGACCCACACCGGCGAGAAGCGCTTCGCCTGCCCCGTGTGCAACAAGCGCTTCATGCGCAGCGACCACCTCAGCAAGCACGTGAAGACGCACAGCGGCGGCGGCGGCGGCGGCTCGGCGGGGTCCGGAAGCGGCGGCAAGAAGGGCAGCGACACCGACAGCGAGCACAGCGCCGCAGGCAGCCCGCCTTGCCACTCCCCGGAGCTGCTGCCGCCCCCCGAGCCCGGGCACCGAAACGGCCTGGAGTGACGTGCACCCCGCCCCTGCCCCTCTCCCCTTCCTCCTCCCACCTTGGTCCGTTTGGGCTTCGTGGGTCCTGGCTTTGGCTTCAGTCTCTTTCCACCCTGCTCAGTATGTCTTTCTGTCTCTGCCCTTCTCTCTTTTAACTCTCTCTGTGACAACTTTGTAAAGGGAATGTGGACATGTAAGTAACACGCGTTGCTCTCCTGGGCCCTAGCTGTCTCTCTACCCGATAACACCGTTGGGGCCCAGAACAGCCCCAGCCGGCCCCTCGGCAGGCCTTTAATTCTTGTCCTCTCCTTGTTCTCCCTTCACCATCCCCAGTTGGGACGGGCACATCTTTTAGAGGGAAGTGGCCGCTGGAGGTAAGGCTGGACCGATCCAGTGCCTGGGACCCCGGGCCTCCGAACGCGCGGTTAACCACTAGGCTGAGCAAGTTTGAGCGCCACCCAGGGCCTCCGGGGCAGGCCAGCCGCCGACTGGCTAGGTACCAGTACCAGAACCGTGTTTTCGGGCGTCTGAGTTGCTGAGCGCCCTGCCCTGCAGCCGGGCGTCGCGGCCTGCCCTTCGCAGAGCTGTCGGGTGCCCATCTCGGACACGGAGACCCGGAGTTTGTCTAGTTCAGCTCTCCAACGCCAGCCCTGACTCTTTCCCTTTGTTCCCTGGGGTGGAACCGATGCAAGTTTTAGCTAAGGGCAGTTTTGGTGAATCGATGCAACAGCCTTCTTTAATCTTTATAACTTTTTTAAACGGAAAATCTAAAGAAAACACAACAGCATCCTTCTATTTGGTTTCCCTTGTAGGTAGTTTTTCCTCTATCAGTAAGCAAGTCTTTCTCTCAAAATTGTGCTAATATTGATCCCAAAGTTATTTTGATCGCATTAACTTAACTTATGAGGTTGGGGGTGGGGGTGAGGGTAGGTGTCTTTTTCTTATGCAAAAATACCCTTTTCCGGTGAGACCAGATTAACTATCTCTGTGTTTGTCCTTTGCTACCTCGTTTTCACCACTCCCGAGCATAATCTCTCTCTCTTTTTTTTTTTGCTAGTCCAGCAGTCAATTTGTATAGTACCCATTTCTGTAAATTCTTGCAATTCGTTGAAGATTCTTAGGGTTTAACTTTTTTGTGTGTGATTTAAACTTATAAACAAGTAAAGAAGCTATTGTTTATTTCGGACCAGGCTGTAGTTTAAATGCCAAAAGGGAAAAACAGAAAAAAATTGTAAGATTTATCTGAACCTAATGGTTTGTACAACGGGAGAATAGTTCTAGATTAGGTATCGATTAACTATAACTCCACCAGTGTATGGGTGCGAGGTGCAGTTGTCCAGGAGACGATTTTGTATATTATTTTTCTTGTACATTATTTCCAGTAAATATTTGAAAATATATTGAAGTAAACTTGATTTTTTTTTTTTTTGGTCACAAGAAAATATTAAGAGTTATTCTTGCAGTTCTGATGAGCTGCAGATTTTTTGAACTCACTTCTGGAGGTGCAGAGCCACAAACGCACTTTCGGGGCCTAGTTTTGCTCGAATATGAATTTAGATAGGTATCAAACTGTAACTAAGACAATATTTGATAAATGTGGGATGACACTTAATTTAATGAAGCATGTACTTACTTGCATTTGCTGGCAGTTCAGGCATAGTTAAAGTGAGAGTACTCTTATATTTCATAATAACTGGGTCTGCCAAAAACCCATGTGTTAAATAAAATGTCCAAGTGAATCTCAACTAACTTTGGCCTCTGTGTATTTCCTGAAGGTAATATTGTTAACTGTTAATAATAAACACTCCTGACACTACATTTAAATGTTTGCAGATTCTGCAAACTAATTGCTCATTGTAATGTTGAAATAATTTGGATATTTCACATTGAAATGAAAAGCCTTTCTCTGGAACATTTTAGACTTGCATTTTAAATGCATGAAATGTAATTGATTTATTTGTAATATTTTAAATGGTATTAATAAACTCAGATAAAGACTA EMBV3_02721 GCAGAATATGGCTGCAGTTTGGAAGACATTATTGTTGTATTGGGGCCTTCAGTCGGACCG Gene GeneID:537649|LOC537649:XM_002691777:373_cdna Constitutive 0 NULL GeneID:537649 12 GENE LOC537649 NULL hypothetical LOC537649 EMBV3_23135 GAGAACCACTGAAAGGCAGAGCAAAGACTCCGGTAACACTCAAGCAAAGAAGAGTTGAGC Gene GeneID:510267|TMPO:NM_001098005:977_cdna UTR3_Alt 3 NULL GeneID:510267 5 GENE TMPO LAP2beta thymopoietin EMBV3_21072 AAGATTAATTCAACCTCCCCACAGGACATCCACCAGCCACTGACACCGCTTTGTCTCATC Gene GeneID:540156|SNCAIP:XM_002688984:43_cdna Constitutive 0 NULL GeneID:540156 7 GENE SNCAIP NULL synuclein, alpha interacting protein EMBV3_14352 CCCCCAGACCGTTATGGCCTCCCAGCAGTTTGTGATCTCTTTGCCTGTATGCAGCTTAAA Gene GeneID:525329|NCOA4:NM_001075868:26_cdna UTR3_Alt 3 NULL GeneID:525329 28 GENE NCOA4 MGC138109 nuclear receptor coactivator 4 EMBV3_20030 GGGTGCTGGTGTTCTCCTGTCATCACGGATTCCAACTCCAAGGGCCTGAGCAGGTCACCT Gene GeneID:525013|TPO:XM_002683944:2_cdna Constitutive 0 NULL GeneID:525013 Un GENE TPO NULL thyroid peroxidase EMBV3_09662 GGCGCCATCATCATTCTGACCTGGACCCTGAAGAGTATGTTTTTGCTGCCCTGAACATCT Gene GeneID:768008|TMBIM1B:NM_001077068:16_cdna Constitutive 1 NULL GeneID:768008 4 GENE TMBIM1B MGC134563 transmembrane Bax inhibitor motif containing 1B EMBV3_39127 GATCCCTGTTAGGGTGTGTTACAAATACAGGGGCCATTTCTTCAGGCCTCCTGCTCTGAG Gene BVV0102_160073 - 1 EMBV3_37147 GK000003.2:19261021-19290675 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08880 TGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTACCAGAGATTGCACGGATG Gene GeneID:100294746|LOC100294746:XM_002692372:259_cdna Constitutive 0 NULL GeneID:100294746 13 GENE LOC100294746 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_04301 AGTGTTACTGTGGCTTCAAAGAAGCTATTGATTCTGAAGTAGTGGGTTTTGATTGAGTTG Gene GeneID:287016|H2AFZ:XM_002688118:23_cdna Constitutive 0 NULL GeneID:287016 6 GENE H2AFZ MGC133929 H2A histone family, member Z EMBV3_14720 GTCTTCACTGTGCCAAGCTAACTGTATCATATAGGACTGTGCTTTTTGTACTTGTTCGTG Gene GeneID:514261|KIF5B:XM_002692107:331_cdna Constitutive 0 NULL GeneID:514261 13 GENE KIF5B KIF5A kinesin family member 5B EMBV3_04780 CAAAGCAAGCACCGTGGTCAAAGGGGTGGCCAGTGGTCTCAGAGAAACTATCACAGAAAG Gene GeneID:781239|PLCXD3:NM_001103304:5_cdna UTR3_Alt 2 NULL GeneID:781239 20 GENE PLCXD3 MGC152172 phosphatidylinositol-specific phospholipase C, X domain containing 3 EMBV3_39447 CACCAATCAGCCTTTTTTCATCAAAACCATCGTCCTGGGGACCCCTGCTTATTACGACGG Gene GeneID:526424|LNX2:NM_001075884:55_cdna UTR3_Alt 2 NULL GeneID:526424 12 GENE LNX2 MGC139931 ligand of numb-protein X 2 EMBV3_07684 ATCAACCCCGTCTATGTCGACGCCTTCAAAGTGATGAGCTCATTTTCCTGGACCCTCACA Variant GeneID:408003|ATG4A:NM_001001171:13_cdna 730^808 1 EMBV3_26402 GeneID:408003 X GENE ATG4A Aut2a ATG4 autophagy related 4 homolog A (S. cerevisiae) EMBV3_35417 CTGGTCCTTGGAGAAGGGAAATGGGTCTCCTGCCTGCACAAATAAAATGGACACTCTCTG Gene BVT0102_118758 - 0 NULL GK000008.2:45528325-45598158 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26871 TGCCAGCTTTGGCAGCTCTGTTTCCGTGCTGACTTGGACCATCTTTGTCTTGCCTTCTCT Gene BVV0102_113075 + 0 NULL GK000028.2:29876088-29878531 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160604 TCONS_00160594 TCONS_00160601 TCONS_00160595 TCONS_00160599 TCONS_00160596 TCONS_00160602 TCONS_00160598 TCONS_00160605 TCONS_00160603 TCONS_00160597 TCONS_00160600 1 XLOC_097688 Coding TCONS_00160601 XLOC_097688 Coding Coding CAMK2G 28:29876580-29930561 j TSS120049 3675 1 TCONS_00160601_5 267 19 0.932271211559837 0.00131924717418649 0.000890692452349319 0.00110539463334148 0.000209150895329663 1.95035828373277e-05 7.72908806559324e-22 3.99367435365808e-09 5.44850790019596e-10 0.00100978579657556 0.000352192903083342 2.0689912233729e-09 3.41000604689028e-05 1.08581985844981e-10 2.97614900104421e-08 5.633944093767e-10 0.00120967641556999 4.58736064658461e-46 0.00207535958043024 3.83666590824451e-08 2.00597323027155e-06 1.34539626603026e-08 0.000861603622745661 2.90176759759443e-05 3.92654688471598e-07 0.000728899189373073 0.00187193646518716 0.000322978639504514 2.65461366311418e-08 3.32511732122802e-05 0.000443234330938343 NM_001097564.1 CAMK2G Bos taurus calcium/calmodulin-dependent protein kinase II gamma (CAMK2G), mRNA. 0.0 1669 99.89 0.252244897959184 NM_172170.4 CAMK2G Homo sapiens calcium/calmodulin-dependent protein kinase II gamma (CAMK2G), transcript variant 3, mRNA. 0.0 5000 91.50 0.962721088435374 TCONS_00160601_5 sp|Q923T9|KCC2G_MOUSE KCC2G_MOUSE Calcium/calmodulin-dependent protein kinase type II subunit gamma; 0.0 553 96.04 0.99625468164794 3 coding 0 0 0 0 -2.14373943745679 0.24847010584451 -0.00222087591769315 0.979555007680866 CCAGGGGTGCTTTCTCTGTGGTCCGCAGGTGTGTGAAGAAAACGTCCACGCAAGAGTATGCAGCAAAAATCATCAATACCAAGAAGTTATCTGCTCGGGATCACCAGAAACTAGAACGTGAGGCCCGGATATGCCGACTTTTGAAACATCCAAACATCGTACGCCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGCGGAGAGCTGTTTGAAGACATTGTGGCCAGGGAATACTACAGTGAAGCCGATGCCAGCCACTGTATACATCAGATTCTGGAGAGTGTTAACCACATCCACCAGCACGACATTGTCCACCGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGTAAATGCAAGGGTGCTGCTGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAACAGGCTTGGTTTGGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGGATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCTTTCTGGGATGAGGATCAGCACAAGCTATATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAGTGGGACACAGTGACTCCAGAAGCCAAGAACTTGATCAACCAGATGCTGACCATAAACCCCGCAAAGCGTATCACAGCTGACCAGGCTCTCAAGCACCCATGGGTCTGCCAACGGTCCACGGTGGCATCTATGATGCATCGTCAAGAGACAGTGGAGTGCCTACGCAAGTTCAATGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCAGCTGCCAAAAGCCTGTTGAACAAGAAGTCGGACGGCGGTGTCAAGCCACAGAGCAACAACAAAAACAGTCTCGTAAGCCCAGCCCAAGAGCCCGCGCCCTTGCAGACGGCCATGGAGCCACAAACCACCGTGGTACACAACGCTACTGATGGGATCAAGGGCTCCACAGAGAGCTGCAACACCACCACAGAAGATGAGGACCTCAAAGTGCGGAAACAGGAGATCATTAAGATCACAGAACAACTGATTGAGGCCATCAACAATGGAGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTGAGGCCCTGGGTAACCTCGTGGAAGGGATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCCATCCACACCACCATCCTGAACCCACACGTCCACGTGATCGGAGAGGACGCGGCTTGCATTGCCTACATCCGCCTCACCCAGTACATCGATGGGCAGGGTCGGCCTCGCACCAGCCAGTCGGAGGAGACCCGGGTCTGGCATCGCCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTGCAGTGAGCTCAGCCACAGGGGCATGAGGAGATCCCAGCCGGAGGTCAAACCTTCGCAGCCAGTGGCTCTGGAGGGCCTGAGTGACAGCGGCAGTCCTGTTCGTTTGAGGTTTAAAACAATTAAATTACAAAGCGGCAGCAGCCAATGCACGCCCCTGCATGCAGCCCTCCCGCCCGCCCTTCGTGTCTGTCTCTGCTGTACCGAGGTGTTTTTTACATTTAAGGGGAAAAAAAAGAAAAAAAAAAAGATTGTTAAAAAAAAGTGGGATCCATACCATGATGTGTTTTAAAACCATCGACAGCCCTTGGGCTGGCAAGAAGGCAGGAGTCTGTGTGATGCCCATCCTGGCACAAGCAGTGGGCTCACCCACCAGCCCTGAAGAGGTGAGCTCGGCCTCTGGCCTCCATGGACTCGGGACCAGGCAAGAACTCTGACAGAGCTCTGGGGGCTGTGTGATGTGACTGCAGCCTCTGAGATGGCCTGCCTGCCCCAGGTCTCGGAATGGACTTCTTCAGAATTTGTATACGCGCCTAGAACGAGGCTTATGAGAACACCGTGGCCAACAGACCTTCTTGGGAGAGAATGTGGAGCTCCCAGCCTGCCGTGGAGGCAGCTGAGAAGCAGTGGCCTCAGGACTGAGAAGCAGGGCCCGGACGTTGCTGTACTCTACCATTTAGCGTAGAAGGGAAGAGAATTGGTGCTGCAGAAGCGTGTCTGCTCCGAAGCTGATGAGAAACCTCGTGTTAGTCTGACATGCACTCACTTACTCATCCATTTCTATAGGATGCACAATGCACGTGGGCTCTGATCTTGAGGCCCAATCCTAGCAGCTGGGAAGTGGGAGGGGTTGCCGCTTTGCTTTGTGTTTGTTTTCTTATAACTTAGCAAAGAGAGAGCCAGGCCTTGGTCTGGGCTCCCCCTGCCAGCTTTGGCAGCTCTGTTTCCGTGCTGACTTGGACCATCTTTGTCTTGCCTTCTCTCGGTGGTGGTCCCTGTGTTGACTCTCATCTGGGCCTGGGCCCTCTGCCAAGTGCCCCTGTGGGATGGGAGGAGTGAGGCAGCGGGATTGAGTTGATGGTTGTTTCTATGCATTCGGGCTGCCCTCAGGGCTGCCTCCCTTCTTACTCTTCCCTTGCTGCACGCCAATCTCTTTTCCTGTCTTTGAGACTGACTTGACTACTCTGGCAAGAAGAGGTATCCTCTATAAAGAGACTTCTTTACTGACCAACTGAAGTATAGACTTACTGCTGGACAATCTGCATGGGCATCACCCCCGTCTCACCTGCATGTACCCAAAAGAGATATCCAGAGCCAAGGCTCCTACCTTCGTTGTCCCTCTCTGTGCTCAAGGAGTTCCATTCCAGGAGGGAAGAATGTATACTCTAAGCAGATAGCAGAGATGATAATGGAGGAGCAATTGGTCATGGCTTTGGTTTCCCCCCAAACAACTGTGCAGGTCTGTCTGCACAAATGTCTGCACTATTGGGGGAGAGATGGGTAGACCCCAGCTCCCTGGACTGCCTTAAGGAGGCACAGGAGCTGGGAGAAGAGGCAAAGCTACAGGTTTACCTTGGAGCCAGCTGAGAAGAGAGCATACTCACGGGTGCTGGTGCTTGGATTTAGCCAGGCTCCTCCGAGCACCTCCTGCATGCCCCAGCCCCCGGGTCCCAGCCGTCTCCCGCCCTGCAGCCTGCAGTACCAGCACGCAGACACCTTCACCACAGGGTTTGGTTTTGCTGGCTTGAAGACAAATGGTCTTAGAGTTCATTAAGACCCATAGCTTCATATGGCTGCTCCAGTCCCACTTCTTAGCATTCTTACTCCTCTTCTGGGGCTAATGTCAGCATCTATAGACAATAGACTATTAAAAAACAACAACACCACCACCTTTTAAACAGGAAATGGAAGGCATTTGATGCAGAATTTTTGCATGATGACATAGAAATAATTTAAAAATAGTGTTTGTTCTGAATGTTGGTAGACCCTTCATAGCTTTGTTACAATGAAACCTTGAACTGAAGATATTTAATAAAATAACCTTTAAACAGTCCATTGTGTTACTGCTGTGGGAGGCTTATGCCCAGAGGTTTAGATTTAACAGCCTGGGTTACAAGGCTTCTGGTGGAGAACTGGACCTTCTCCCACTCCTTTTGGACCCATTTTAGAATAAAACTTCCTCCTAAAC EMBV3_21728 GGTCCATGGGGTTGTAAGGAATTGAACATGACTGAGCAACTGAATGTGCACGCATTACCT Gene BVV0102_045750 + 0 NULL GK000006.2:31567340-31710455 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10132 CAGGGCAGTTTCTCTTTGAGGCGTGAGCTTGTCCTGCTGAGTATGTTTATAGGTCACAGG Gene GeneID:510620|ASAH1:NM_001075459:34_cdna Constitutive 2 NULL GeneID:510620 27 GENE ASAH1 MGC140781 N-acylsphingosine amidohydrolase (acid ceramidase) 1 EMBV3_22675 AAAAACGGTCCGGCGGAGGACTCGCTCATGCACTCAAAGCCTCTGATTGACTGGTTTGAT Gene GeneID:100138235|LOC100138235:XM_002684832:164_cdna Constitutive 0 NULL GeneID:100138235 1 GENE LOC100138235 NULL similar to glypican 5 EMBV3_19628 TGCGAGCCCTGGGATGGGGCTCACTTTATGCCTGGAAGAGTCCCGCCCTTCAGGCAGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15693 TTAGCTGATGACTTGCATTTTCTGTCTGGTCATGTGGAACTCACAACATCCCCAAATGCC Gene GeneID:616874|CENPQ:NM_001078065:359_cdna Constitutive 1 NULL GeneID:616874 23 GENE CENPQ NULL centromere protein Q EMBV3_32081 AGTCTTTGGGTTCCGGGGGGATTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAAC Gene GeneID:100336700|LOC100336700:XM_002698297:1036_cdna Constitutive 0 NULL GeneID:100336700 25 GENE LOC100336700 NULL hypothetical protein LOC100336700 EMBV3_39409 CTCATCATAGCCTTCACCTCTACCACCATCATCCTCGCTGCTCCTGTCTATCACTGGTGT Gene GeneID:493737|KIR2DS1:NM_001097567:136_cdna Constitutive 0 NULL GeneID:493737 18 GENE KIR2DS1 KIR3DL3 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 1 EMBV3_02933 ATAGCCAGGAGGAAGCAGCACAAGGAGTGTGAGAACCTGGTGAGATCTAGGGAAGGAGAG Gene GeneID:100295933|LOC100295933:XM_002685778:607_cdna Constitutive 0 NULL GeneID:100295933 2 GENE LOC100295933 NULL similar to ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 EMBV3_28335 TTGGTCTCACACGGCTGTAAGTAGTCACGGTCTCCTGATGCGTGACCTGATCTCATCTGA Gene GeneID:506130|KIAA1737:NM_001075242:88_cdna UTR3_Alt 1 NULL GeneID:506130 10 GENE KIAA1737 MGC139327 KIAA1737 EMBV3_10106 AGCCATCAAAAGCTTCAATGAAGTTAAAAGACTGGAAAAGCACAGAGGGTGAGTGCACAG Gene GeneID:100138971|ZNF570:XM_002694963:111_cdna Constitutive 0 NULL GeneID:100138971 18 GENE ZNF570 NULL zinc finger protein 570 EMBV3_05553 GATGGCAAAAGTTCTGGAAACGTCACTGTGGTTGGCAAATGCAACTCCTGCTTGCATCCC Gene BVT0102_068537 + 0 NULL GK000026.2:33335590-33756335 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38837 AGGGACCATAAAAGAAGGATTCAGAGAGACCTAAGATGGACTTGATCCACCATTGCTGGC Gene BVT0102_427768 + 0 NULL GK000006.2:110067531-110136878 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32492 ACTTCAAGCTCGTTGGGTAACCAGAGTTTTCAAAGGCTTATGTACCTTGCCCTCAGAGAG Gene GeneID:504401|FMO2:NM_001075162:87_cdna Constitutive 0 NULL GeneID:504401 16 GENE FMO2 FMO4 MGC143187 flavin containing monooxygenase 2 EMBV3_35610 CTGTACCTGAAGCCCCCAGCCCACGAGGAGTCCAAGGCGCCGTCCAAGGGCTTTGTCGTT Gene GeneID:767882|HDLBP:XM_002686622:150_cdna Constitutive 0 NULL GeneID:767882 3 GENE HDLBP NULL high density lipoprotein binding protein EMBV3_11242 AGAGCTCTTTATACGTTTGAACCCAGAACTAGTGATACCAATTGGTGGAAAGGTACCTGC Variant GeneID:281961|OSTF1:NM_174409:29_cdna 215^265 3 EMBV3_29577 GeneID:281961 8 GENE OSTF1 MGC137137 osteoclast stimulating factor 1 EMBV3_22973 CATCCCTGTGTGGAAAGCATGAAGGACAACGTGCTGAGAGATCGAGGCCGACCAGAGATT Gene GeneID:535376|TGFBR2:NM_001159566:164_cdna UTR3_Alt 2 NULL GeneID:535376 22 GENE TGFBR2 NULL transforming growth factor, beta receptor II (70/80kDa) EMBV3_00752 TTTACTTACATAGAGAACACAATTTTTTTTTTACTAGCATCCGGGTTTCCTTGTAACCTG Gene GeneID:516469|ENKUR:XM_002692093:291_cdna Constitutive 1 NULL GeneID:516469 13 GENE ENKUR NULL enkurin, TRPC channel interacting protein EMBV3_31329 TCAACGGCTCCCACGAAGCCAATATGTTAAGCCAAATTTACAGATGACTGCAAGTTCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10340 CTGTGGTAGTATGTATCCTAGTTCCCATAGTGACGTAAGTAGGGTTGTGCCAAAGCTTAC Gene GeneID:504415|CHL1:XM_002696954:90_cdna UTR3_Alt 2 NULL GeneID:504415 22 GENE CHL1 NULL cell adhesion molecule with homology to L1CAM (close homolog of L1) EMBV3_06304 GTAAACATTTGTTTTCATAAGGAGATTTATGCCCTGTGATAATTAGAGACACTTAAGTTA Gene GeneID:509041|NAPG:NM_001046022:71_cdna Constitutive 2 NULL GeneID:509041 24 GENE NAPG MGC137662 N-ethylmaleimide-sensitive factor attachment protein, gamma EMBV3_35899 GAAGGGGGCCTTTTACAAACGAGGAAGAGAACCTTTACCAGAAACTGACCATGCTGGTGC Gene GeneID:514035|LOC514035:XM_002696700:83_cdna UTR3_Alt 1 NULL GeneID:514035 21 GENE LOC514035 NULL hypothetical LOC514035 EMBV3_03051 CAGGTCGCCGTCCCCCTCCATCCTGCAACAGCCAATCTCCAATAAGCCTTTTACAACTAA Gene GeneID:618649|SHANK2:XM_002699425:98_cdna Constitutive 0 NULL GeneID:618649 29 GENE SHANK2 NULL SH3 and multiple ankyrin repeat domains 2 EMBV3_05702 ACATTTCAACCTGGGGGTGGCCTTCTGTCATTACTGGCTTTGTGGGGCCTAGATAGGGTA Gene GeneID:505889|PPYR1:XM_002698942:35_cdna Constitutive 0 NULL GeneID:505889 28 GENE PPYR1 NULL pancreatic polypeptide receptor 1 EMBV3_41987 TGTCTCTGAGTTACTTGCAGATGTTGGTGGTCAGCTGGGCCTATTTTGTGGGGCCAGTGT Gene GeneID:100299729|LOC100299729:XM_002694426:129_cdna Constitutive 0 NULL GeneID:100299729 17 GENE LOC100299729 NULL similar to amiloride-sensitive cation channel 5, intestinal EMBV3_05449 CAACGTGTCAAGGGCCAAGGCTGTGCGGGCCCTGAGGGACAACCAGAGTGACATCGTCAA Gene GeneID:531208|NACAD:XM_002686887:90_cdna Constitutive 0 NULL GeneID:531208 4 GENE NACAD NULL NAC alpha domain containing EMBV3_34018 GTCACATTCGCTCCATCACGTCAGTGCTAGCCTGGGTTGCTGCTAATGAGGTGAAGAAAT Gene BVT0102_119285 + 0 NULL GK000025.2:41820368-41940911 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145666 TCONS_00145667 TCONS_00145664 TCONS_00147452 2 XLOC_088896 XLOC_089376 NonCoding TCONS_00147452 XLOC_089376 NonCoding NonCoding - 25:41824102-41824637 - TSS110016 535 1 TCONS_00147452_3 122 1 0 2.52885387996778e-08 1.87814492217651e-05 5.18905472436795e-05 0.000253051966190206 0 1.38324510978082e-05 0 1.54932063149626e-05 2.94953094503041e-05 0 0 0 0 0 0 0 0 0 0.000140486499753478 0.000508470703023689 2.95791124792704e-10 0 0 3.66273248570765e-10 2.20732437503693e-05 3.93375921534506e-05 9.86550266373203e-16 0.000287256832080416 0 0 0 noncoding GAACCACCGTATTTCTTCACTTCATTAGCAGCAACCCAGGCTAGCACTGACGTGATGGAGCGAATGTGACGCGGGGCTCACGCTCACCATCCCCGTTGGGCCCCTCCTCGGGGACAGGGCTGGCGTCGAGACGGCAGCTGAGGGGGCTTTGGGGGGCCCGGACGGTGTGATGGCCGTGCCGTCCCCTCACCTGCAGGACCACCGGGTGGCCTGCGGACCCGATGGCTGTGAAAGCACTCGTGCCTGGGGGCTGCGTCTCCCTGGGCACAGGATGGGCACGTCACGCACCCTGGTCTTGCCAGGACTCAGGCCAGGGTGGCCCTTGGGCGTAGGGGCACTTCCCGCTGGCCCCGTGAAACCAAAGCAGCTGGTGCTTGTGAGCTGGGCACTCCTCCCCGTCTCAGATGAGGAAATGGAGCAGGTGTGCCCACCGCTGTCCAGCCTGGCGGCTCCCATGCGTTGGGCACTGCTCGGGGCCTGGGGCGTCATGGCGTGGACTGGACGCTTCCCTCTGGAGTTCACATCCCAGCAGGCA TCONS_00147451 s 5' 3514 TCONS_00147451 s 5' 4048 EMBV3_23839 CACAAACTGCAAAATCAAACCAGGTAATGCCTTATGAATGACGCGGCTCCCCGAGAGTAG Gene BVV0102_115343 - 1 EMBV3_11642 GK000004.2:66851246-66858489 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184349 TCONS_00184350 1 XLOC_111326 Coding TCONS_00184349 XLOC_111326 Coding Coding WIPF3 4:66853804-66912940 j TSS137297 4059 1 TCONS_00184349_2 239 8 0.931495730109072 0.000107413427853212 1.71232651465757e-05 0.000143748613715811 0 3.03504952174458e-06 1.67602537920047e-05 8.62916515494186e-05 0.000141451581805121 0.000223674280713709 0 0 0 5.97939624557457e-06 5.44681092300861e-05 1.79475818332588e-06 0.000117300320331781 0 1.63658873359645e-05 1.04052167543362e-05 9.22309221830865e-05 3.44404356851705e-05 1.83719152637187e-06 3.84945351219876e-05 9.11037654747316e-05 1.87448365314783e-05 1.55308780133537e-05 2.745881116345e-05 0 3.75569912366757e-08 0 XM_002686848.3 WIPF3 PREDICTED: Bos taurus WAS/WASL interacting protein family, member 3 (WIPF3), mRNA. 0.0 6343 100.00 0.866223207686622 NM_001080529.2 WIPF3 Homo sapiens WAS/WASL interacting protein family, member 3 (WIPF3), 0.0 2334 75.95 0.800689825080069 0 coding 0 0 0 0 -0.0143066838818106 0.905165092730094 0.0129951567257159 0.818680022276188 CTCCCCCACCCCCACCGTCTGCACCGCCGGTAAGTGCAGATGCTTCCAGCTCGAGAAAGGCAGATCCCAAAGGTCGGAGTGCACTGTTGGCTGATATCCAGCAAGGGACTCGCCTCCGAAAAGTCACGCAGATCAATGACCGCAGTGCCCCGCAGATTGAGGGTTCTAAAGGAACCAACAAAGAAGGAGGAGGTCCTGCAAATTCTCGAGGGGGGAGCACACCTCCAGCCCTGGGAGATCTGTTTGCTGGTGGTTTTCCAGTTTTACGACCGGCAGGCCAGAGGGATGCAGCAGGTGGCAAGACCAGCCAGGGCCCTGGCTCCCGGGCGCCTTCTCCACGGCTTCCCACCAAGACTATCAGCGGCCCATTCAATCCCCCTGCGTCTCCCAGGCTAGGCAACGCCTCTGAGGGGCATGGCGCGGCCAGGGCGGTACCCCCTCGCCCCAGCGTGCCCGCCCCACCGCCTCCAACCCCGCCCCCACCGCCCCCGCCCCTACCGCCACCCCTGCCCCTGTCGTCCCCCGTCAAAGCTCCGCTGGTGTCCCCACCTGGCCCACCGTCTAAAGGGAGCCCGCCGGTGGTTCCACCGCCTCTGCTCTGCCCACCGCCTCCTCCTCCCCCGCCACCCCCGCCACTCCCGCCGCCCCCGGCCTTGGGTCCCAGTGACAAGGCAGCGAAGCCTCAGCTGGCCCCCTTGCACCTACCGCCCGTCCCGCCCCCGCTCCCTCTGCTCCCTCCCTGTGGGCACCCGGGGCTCAATGCGGAGGCTGCCAGCCCGGCCCAAGACGTGCGGGAACCTCCCGCCCCGCCGCCCCCGCCACCTCCACTCCCCCTTTACGCCTCCTGCACCCCCAGATCCTCTTTGCCTGCACCCACTTTGCCAAGTGCTAACAGCAGCAGTGAAGTCCCACCCCCGCTGCCCCCCAAGTCCCCCAGCTTCCAGGCCCAGCCACCCAAGCCCAGCGGGCAGGCCTTGCCAGCGCCGCCCGCCCCTCCAGGATCTCAGCCATTCCTGCAGAAGAAGAGGCCGGGCCGAGGCCCCGGGACCGGTGGGGGAAAACTCAACCCACCCCCAGCACCCCCTGCGAGGTCACCCACCACTGAGCTTTCCAGCAGGAGCCAGCAGGCCCTAGCCTGGACCCCAACCCAGCAGCCCGGAGGTCAGCTGCGGAATGGAAGCCTGAACATCATTGATGACTTTGAATCTAAATTCACATTCCATTCCATGGAAGATTTTCCTCCTCCGGATGAGTATAAACCATGCCAGAAGATTTACCCCAGCAAGATCCCCAGAAGCCGCACACCTGGTCCCTGGCTCCACGCCGAGGCAGGCGGGCAGAGCTCTGACGACATCAAAGGCAGAAACGCTCAGTTAGCGCTTAAGACGCTCCGGTGAGAAGACGGATGAAGCCAATGTCCTGTGAGCCACCTGGAGGTCCATATGGCAGGGTGGGCGTCCCCAGGAGAACGTCAGACCTCACTATTCTCAAGTCGTAATTCAGCTGACACACAGGCTCTTAATGGAGCGTTTATTTATTGTAAATACGTGTTTTGCACAGGCTTTAAATCAGTATTATAGTCAACTATTATTTGAATAATTTAAAACACACACACATTATTTCTCCATTTTTTAAAGTGCACCTTGGCACAGGTGACAGCCTTGTCCCACCGCACAGTGTCCATTCCATGACTGTAAATACGTCTGCAGGCTGGCCCTCCCTAGACTCGGAACTGTTTTTAGACGATCCCTTAGTTTCCCAAAGTCATAGTATCCACAACAGCTTCTTATTGGCATGATTTTTCTAGTCTCATCACACAAACTGCAAAATCAAACCAGGTAATGCCTTATGAATGACGCGGCTCCCCGAGAGTAGCGTGTCCCTCACCCAGATGCTGCCACATGGCCCCTCCTGCTCCCATCCTGCAGTACAAGGATTCTTTTGCTGCCTCATGTAAATATAACGCAGATCAAAGCCAAGAGTGGCCTCAGTCCCTCCAAGGCTGACCACAGGGCCCCTTGTGTAACTGAACAGTCCTGCAGGTAGCCAACGCTCTTACTGTTTACACTGCCCCTCGTGCCCACGTTTCTGCAATGGTCCTTCCTGTCCCGCTGAGCCCCCATCCTGGCAGCCAGGGTGAGGTGAGCTGAAGGAGATTTCAGTATGTTCCCTGCAAATTAGAAACCTACATAAGTCATCATTAATTCTGTCTCAGAAATGTTTTCTTTTTCCTCCCCTGAGTGCAGGGTTTATCATGGAAAGCATGACATGAAAAAGTATAGACTAAAACATATTCTGAAATACCTGCCTCAAATATCATGTCCCCCGCCCACGCTTAGGGAACCTGGATCCACCCATCAGGTAAACCTTAGCACCTTTCTGAGCTGGTCTGAGAGTCCCCCAGTCCCTGTGGTGGCACCCCTCTAGAGAGGAAAAGTATATGAGTTCAGCTAGCCCTGAATATGGATGGGTCAGGACTGGCTGTGACCTGTGGCTGCTCCTCTCATGCCCTTTTTCTGGGGCTGGCAAGGGAATGAAAGTGTGTTTTTGCTTGCTGCCTGACCTCATCCTTGGAGGAAAAGCTGTGACTGAGGAAGGAGAGAAAAATAGAAAAAAGCAGACTGACCCTTCATCTGTGCTCAAAATAGCTGCAGATTAAAGGAAATCCGGGAGAGGTGGAAAGAAAACAGTGAAAAATGTTTCCTCTGAAACAGCCCACTCATACCCTCACATCTTGAGGATGTAATGCCCAGAATACGCCATGTGCAGAAGGCAGACTGTTAGTGGGGTTTTGGCAAACATGTGACCGCATCCACCACCTCCTGTCTGGAATGGAGACTGACCCTGAGATGGTGTCCACCATCATTGTGTACTCTCTCATTCCAAACAGAAGCCACTGAGCAATGTCAAGTTCCCTCCCCTGGGGAATAAATCACGCCAAACTATTAACAGCTAAATCAGTGACAAAGAAGCTCTTGCAGGTCATCAGCTGTGCGTATAGCTGATCTGTCTTATTGGTTCTGCAAGCTTTCCAAAAGGTCAGAACTTTTTTTATATAACACTATCCACTCCACCTCTCTCCCAGTTGTACAAAATAATTACAAGGGTTTTTTAACAATCATGATTAAGAAGGCGCTAGACCAAAGCCGTTCCACCTTCGGAGTAGACTGCCTGCTCCGATGAGGTGTTTACATCCTGATGTTCTGCACCACTGGGATAGAAATTCAAAATAAAACTATTCAAGGTCAGAGGGAAGAAATGTGCAGAAACCAAAAATTGCAATTAGGGAAAAATCTCAGGAATCTGGCATCACATCTCTCCTCCAGACCCAGCACTGAATTCCTGCCCTTTGAACTCTTGCGGCAGGACAAATACTTCACCTCTGGACCACAAACTCAAACAGAGTGCCCCTCCCATCCTCGAGGAATCTCCCCAGCGCTGTGGTCTGTGACTCTCCCAGTGTTTCCCGTGTATTTTATATTTATTGATCTTCCCTCTGCAGATTCATTTCTTTGTATTAATAAACTTTAACAAGTGGGAATGCTTCCAGTTGTTTACTTGTTAAAGCTGATTGACGGTCGCCGGCACCAATCTAAGCCAACCATATTTAAGGATTAGAAGGGCTCAGACAGGATACTGACACAGGACCCAGCACTTGCTGTAACATTCTGGGTTAGAAATGGAGCCTTTCTTTTTGGAGGTAAACTATACCTAAACTAAACTACAGAATGTTTTCCTGATTTTTGTAGCTAATTAAACGAATAGGTGTTTGAGAAAACCAAGCAAGGGAAAAATTCAAATGTATTTTGTAACAAGTAGATAACACTATACTTATTCACTTTTATGAATATCAAACATGCTTACAAATTCTGCTAAATTGTGTTGAAATGGAGCAGCTTTCAACTTGAAGTGCACTTAGCACCACCCCCTCAGCTTAGCAAATGCCTTAAAAAATCTGTGTGGAGCAGTCTCATCGCCATCTCCATTATAGTGTCTCCCGGTGCCCTCTTTGGAACCTGGTACAGGGGACATAAGGTTTGCCTGATAGGTATGTTGGCT EMBV3_42722 GACAACATCATGAGCTGGCAGCCTCCAGAGATGGGGAAGAAGATAGAGGCCACCACCCTG Variant GeneID:282469|SEC14L2:NM_177943:20_cdna 316^504 1 EMBV3_22808 GeneID:282469 17 GENE SEC14L2 MGC133745 SEC14-like 2 (S. cerevisiae) EMBV3_24133 CCTGGTTACAAGAACCTGAGTTTAAACAGAAGACGGATGCTGGAGGAAGCGGGGACGCCT Gene BVT0102_344567 + 0 NULL GK000006.2:104918269-104970911 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206099 1 XLOC_124824 NonCoding TCONS_00206099 XLOC_124824 NonCoding NonCoding - 6:104933911-104935224 - TSS153755 664 2 TCONS_00206099_1 70 2 0.495426829268293 0 2.65834354699919e-16 0.000222987379010854 2.28715690005135e-05 0.000111532602479671 0 5.95957850174702e-71 1.15002874678082e-06 0 0 0 0 0 4.34463802422233e-238 0 0 0 0 0.000501767486087151 0.000354603361938256 0.000228594157144632 0 0 0 0.000921992894340222 0 3.55711969277051e-07 0 0 0 XM_005208206.1 JAKMIP1 PREDICTED: Bos taurus janus kinase and microtubule interacting protein 1 (JAKMIP1), transcript variant X3, mRNA. 4e-80 302 100.00 0.25 NM_001099433.1 JAKMIP1 Homo sapiens janus kinase and microtubule interacting protein 1 (JAKMIP1), transcript variant 1, mRNA. 1e-55 221 89.22 0.25 0 noncoding 0 0 0 0 0.136180651011889 0.244394616654425 0.0939354706462517 0.0885118231797872 GCAGTGAGCCTCCAAGGTCTGCCAGACCCTGGGGCCGCCTCAGCTCCAGCAGCACGACGGGTCCTGGGAACCAGGCCCCCGTGTGCTCAGCAGCACAAGAGGCTCACACAGGACGTCGCACACACTTAGGAATACCAAAGTAAACCGGCCAGCCGGCGCCCCTGGTTACAAGAACCTGAGTTTAAACAGAAGACGGATGCTGGAGGAAGCGGGGACGCCTCGCTTTGGATCTGACTGTCGAACTCCCGGCTCTGCCGCAGGATCTGCCGGCGCAGCTTCTCCACGGCGGCCTGCAGGTCCTCCCGCTGGCCCTCGCTCAGCGCCTCGCTGGCCCTCCGCCCCGGCTCCTGTTGCAGCGCATCGTACAGCGTGGCCTCCAGCTCCTGGATTTTCTGAGCGACCCACATGACACAGACAGTGGGAGGTCACAAGGTGGGGGCAGCAGGAAACCCCAGGACACTGCAGCTGAGCGAGGCTGAGCTGGGGGATCTTGGGCGGGGTGGGGAGGCATGCAGCGGGCAGAGAAGAGCGGGGTGGGGTGAGGGAGCCCCTTCCAGTTCCTGCACACAGTTTTGAGAACATGTCTTACTCTATTCAATCAAGATGCTCTGCTCTCCACAGATAAAGAAAAAATAGTCATAATCCCTTCTTAAAATATCTGATT TCONS_00204041 TCONS_00204042 TCONS_00204043 r 3' 15644 TCONS_00204041 TCONS_00204042 TCONS_00204043 r 3' 16080 EMBV3_41148 CAGGGCTGCCGTCGTGTTGCCATTGTGTTGAACGTTGTGGGTTTATCGAGCATTCCTAGA Gene GeneID:504310|AP1M1:NM_001045884:17_cdna Constitutive 0 NULL GeneID:504310 7 GENE AP1M1 MGC128447 adaptor-related protein complex 1, mu 1 subunit EMBV3_22128 AAGCGGCTATTGACCGGGAAGGAAATCATCGGTATCACTTCAAAGCACTGGATCCTGAGT Gene GeneID:541211|DIXDC1:XM_002693011:216_cdna UTR3_Alt 2 NULL GeneID:541211 15 GENE DIXDC1 NULL DIX domain containing 1 EMBV3_25102 ATAGCCAGAAGATGGATAAATGGCATGCTGGTTAATTTTCCCATGTGCACCATTGCGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38366 GAGTGACCTTGAAGTGGTTCCTCTGACATCACTTGGTTCCTGCTCAGTTTTCCAGCCTTC Gene BVT0102_010457 - 1 EMBV3_35461 GK000013.2:80612354-81278963 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046560 1 XLOC_026732 NonCoding TCONS_00046560 XLOC_026732 NonCoding NonCoding - 13:80659489-80682328 - TSS33753 2769 1 TCONS_00046560_6 92 0.355001805706031 4 0.878929853752518 0.000764243901360847 8.82425537898693e-05 8.6696806684437e-05 0.000256974674546654 0.000443082941098831 0.000217365751506525 9.86337091069753e-05 0.000120947304365406 0.000136425495777081 0.000291939768167459 0.000274865533838725 4.00174937380204e-05 0 6.53192168117023e-05 0.00144382657154151 1.18082724021747e-23 2.40843889062008e-24 2.6488645447811e-14 0.000150000614894029 0.000425507032656955 0.000310969101251122 1.33553344626952e-05 0.000311337899151594 0.00028913264342832 0.000137874076335932 0.000459955552818507 0.000949827714936963 6.21241574280274e-05 0.000204308598961678 0.000127237315678938 XR_226083.1 LOC101902691 PREDICTED: Bos taurus uncharacterized LOC101902691 (LOC101902691), 0.0 969 100.00 0.193571686529433 0 noncoding GTCGAGCGCCGCGCCTCTGCGCACGGCCCCGGGCTGCGGGGCCGGGGCCGCCATTTTGAGCCAGGAACTCTGGTCTCAGTGGCCGGGTTCAAGGTCTCTGCGTGCAGCAGCCTGTGAGCCAGTGACACCAGAGGAAGCGCAAAGGGATGACAAAAAAGGAAATCAGGAAGTCCCCTCAAAGACAAGAAGGCTGGAAAAATGAGCAGGAACCAAGTGATGTCAGAGGAACCACTTCAAGGTCACTCCAGAGGAATTTTAACTCTTGTTGAGACACTATTCTCCAAGTGCCATGGCCACTGCTGCTGTGGGACATTTCTGCCATTGGGCTCACAACACCGTCCCAGTGCCTTTGCCACCAACCCTCACTGAGGGAGCTGCTTCCATAGCCCAGGGTTTAAGTGCGACAAGGTGAGCTTATCGACAAAGGTGTGGATCCATGGAACACGTGAGGAGATCAAACTCAAAGCCGTGTTGAACTGCAGCTATGACTCTCCGTGGTTACCCACTTGGCTATCTGGAATCCCTGACGCTTTGAGTGGATGTGTGTTTATCACGGCAGGCGCCACAGGCACTGAAGGACGTCTAGCTGCATCCCTGCTCGCTCTCAGTCCACAAAGAGAGAGCACATGTCTCTCCCGGAGCTGCGCAGACCAGGACTGCTCCAGCCATTGCCAAGTGTGCCCTGGGCAGGGGCAAAATCACTGTCAGTTGAACACCACTGTTCTAATCCTTGCTGAATACCCTTGACGCCATCCCAATGGAATCAGAATCTTTGGGCACGGACCCCAGGTGCCAGCATTGGAAAAGCTACCCAGTGCTTTTAAACCGTAGCCCAGGTTGAGAGTTTCCATCCTAAGCAACTGGTCTAATATTGCCATAGAGCTTCTTAAAGTCCTTCTCAAATATTTTTATAATCGGGCCCTCCACTTAGCAACACATGAGCAACTACTATGTAGAAACAATATTAGCTATAATGTCAAGTACCGTCTCATGGAATTTGCAATTTAATGAGGTCATGAGAGTGCGAGGGAAATAAATTGTTTTTCATGTGTGAGTACGTATGGAAAAATACCTAGAAAGAAGACCTAAGAGGAACGAGAGAAATGAGTGCTGATCTGTGGAAGGAGGGCAGGGGAGTTAGTAGACAGGTGGGACCTGGGAAGCTCATCGGGGGTGAAGAGCCACACGACCTCTGAGAGGACAGGAGAGGGTAGGGCATTGTGATGTTTTGCAGAGCCTGGTATATTTTTTAATGAAGAGGGTTATGAAGACTACAGTATATGTTCAGCACTGATCTTTTTTTAAATACCAGCTTGATTATAACACACCATAAAATTCACCATTTCAAAGTGTACAATCCAGTGATTTTTAGTATATACACAGAACTATGCAATTGACACCACCATCAAATTTCAAATGTCTTCATTACCTTAAAAACAAACCCCGTACTCCTTAGTAGTCACTCTCCATTCACTGCAACCACCCCAGCCCCTGGCAACCAATGATCTACTTTCCGTCTCTATAGATTTGGCAATTCTGGACCTTCCATATCAACAGATCCATGTAATATATGGCCACTTGTGTCTAGCTACCTAGACAGCATCTGAAAACAAAGCAAAGCAAAATGAAAGGGAAAACAAAATCTTCCTCCCAAGAGGCAATTTAGCCTAGAGCCCAAGAGATAGGCTTTGGCACCAGACGAAATTTCAAATTAAATCAAGTCCTAACCCTCTAGCTGTTTGATCTCAAGCAGACAGCGTTGGTCGACCACCCAACACCCCTCTCAATGTCCAACTCTCACCATAGAGACTGGAAAGTCTAAGTAGCATTGTCCCAAGTCCTCCAGTTTCGCCAAAAAGGAGACATTGGAAAGTCTCAGATAGCTCCTAGGAAGGATATTTCCTTCCAGGATTAGAGAGAGACGTACCAGAAGAAAACATAGTGTCATTTGTCCTCCTTCCTTCCTTCGAAGGATGTGTGAAGGCAGGAATCTCGGACACATGGCTGCCATATTGTGACCATGAGGGAAAGGCTAAGAAGATCCAGAAATGCCAGCCTAGATCTGATTCTGTTGCTCCAGATCCAGTAGCAGCAACTGTCTTCTCAGTGATTAATTGTGCCTGAAAAATAAGCCCTTGTATGTCTAAGCTTCTGTTACTTGGGTTTTGGTTACTGGGAGTATCAAATTCCTGCAGCAGAAAGTTACTTCACTTCTATGCAGAAGTTCACACACTGGGGCAGAGCTCCCTCACCTGTATCTCGAGAATCCGCTACCATTTGTTGAAAATTGGTTTCCTTTTGGGAGTGTGTCTTCTTTGGGGAAGCTCATGGGATTTGCATCCTGTTCTTTTGCTAAGATATGAGCCTGTTAGTCAACCTACACTCATCAGAAACCCCTCCCTGAAATTTTATTTTTGAGATGGAAAGTTAATCAGAATTCATTCTTCCTAGTGGAAAGCACACTGACTAATGAACCTGTTCCCACCACAGGGCTGATCCTATATTTATCCATGCATACCTTCATCCATTCATTCTAAAAAATTTATTGAGCACCTAATATGTGGCTTCCCTGGTGGCTCAGCTGGTAAAGAACCTACCTGCCAATGCAAGAGATGCAAGAGACATGGGTTTGATCCCTGAATCAGAAAGATCTCCTAAAGGAGGAAATGACAACCCACTCCAGTATTCTTGCCTGGAAAATCCCATGGACAGAGAAGCCTGGCATGCTGCAGTCCCTGGGGTCTCAAAGAGTTGGATAAGACAGAGTAC TCONS_00046557 s 5' 43934 TCONS_00046557 s 5' 46184 EMBV3_22978 GGTTCCTGTGAGTTTATCTGCTAATTATGAAACTCGGGGTCCATTTACAGTGTGGGGAAG Gene GeneID:614045|C1QL3:XM_002692101:314_cdna UTR3_Alt 2 NULL GeneID:614045 13 GENE C1QL3 NULL complement component 1, q subcomponent-like 3 EMBV3_15032 GGTTTGATCTGTGACTCAAGATATGGTCTCTCCTGGAGAATGTTCCATGTGCACTTGAGA Gene BVV0102_430702 - 1 EMBV3_33025 GK000001.2:104265597-105069156 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00047307 TCONS_00197118 TCONS_00091705 TCONS_00175170 TCONS_00188671 5 XLOC_027443 XLOC_118781 XLOC_056478 XLOC_104953 XLOC_114712 Coding TCONS_00188671 XLOC_114712 Coding Coding - 4:72935981-72938535 - TSS141039 2554 1 TCONS_00188671_7 165 0.999216914643696 1 0 0.000271561519208133 0.000120654587581529 8.33366188004956e-05 0.000299130885732563 2.89968072672215e-05 5.23346081618378e-05 0.000111884781946021 0.000401648478630003 0.000208398143432484 4.02750131231151e-05 2.68894004985283e-06 0.000138369899197405 3.20182162686722e-05 0.000524349491874027 0.000509401134179161 0 0 0 7.58085534034197e-05 0.000101818297529328 1.18861623190121e-06 0 0 0 0.000100147342442058 3.99996969458322e-05 8.75584461927091e-05 6.26806443576317e-07 0 0 XR_236034.1 LOC101902035 PREDICTED: Bos taurus uncharacterized LOC101902035 (LOC101902035), 5e-73 280 72.61 0.198120595144871 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 877 69.31 0.881362568519969 TCONS_00188671_7 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 5e-63 212 82.11 0.739393939393939 1 noncoding CCCCATATGCTTAACAACTGATCTTTCAGCAGAAAGTCTGCAGGCCAGAAGGGAATGGCAGGATATAAAGTACTGAAAGGGAAAAATCTACAACAAAGATAACTACCTGGAAAGGATCTCATTCAAAATTGATAGAGAAATAAAATCTTTTCAGACAAGCAAAAGTTAAGAGAATTCAGTACCACCAAACCAGCTTTACAACAGATGTTAAAGGGACTTATGTAGTCAAGAAATACAAGAGAAGGAAAAAGATCTACAAAATCAACCCCAAGCAGTTAAGAAAATGGCAATAGGAACATATATATCAATAATCACTTTAAATATAAATGAATTAAATGCTCCAACCAAAAGACACAGACTGGCTGAATGGATAAAAAACAAGACCCACATATATGCAAGAAACCCACTTCAGACCTCAAGACACATATAGATTGAAAGTGAGAGGATGGAAAAATATATTCAATGAAAATGGGAAGAAAAAGAAAGCTGGAGTAGCAATACTCGTATCAGACAAAATAGACCTTAAAATAAAGAAAATTACAAGAGATAAGGAAAGACAGTATATAATGATCAAGGGATCAATCCAAAAGGAAGACATAGCAATTGTAAATATTGGTGTACCCAATATAGGAGCACCTCAATACGTAAGACAAACACTAACAGAGATACAAGGAAAAATTAACAGTAACACATGATAGTAGGGGACTTTAACACTCCACTGGCATCAATAGACAGATCATCAAAACAGAAAATTAATAAGGAAACACAAGTCTTAAATGATACATTAGATGAGATGGATCTTATTGATATCTTCAGGACATCCCATCCAAATGCAGAAGAATATACCTTCTTCTCAAGTACACATGGAACATTCTCCAGGATAGACCACATCTTGAGTCACAAATCAAACCTCAGTAAATTTAAGAAAATTGAAATCATATCAAGCATCTTCTCTGACCACAACACTGTGAGACTAGATATCAGTTACAAGAAAAAATTGTAAGAAACACAAACACATGGAGATTAAACAACACATTTCTAAATAACCAACAAGTTACTGAAGAAAAGGGAAATAAAAAAATTTCTAGAAACAAATGACAATGAAAATATGACAATTCAAAACCTATTGGATGCAGCAAAAGCAGTTCTAAGACGGAAGTTTAGAGCAATACAATCCTACCTCAAGAAACAAGAAAAACATCGAATAGACAACCAAACTTTACACCTAAAACAACTGAAAAAAAAAAGAGCCAAAAAAAAACCACCCCCAAAATTAGTAGAAGGAAAGAAAACATAAAGATCTGATCAGAAATAAATGAAAAAGAAATTAAAGAAACAATAGTAAAGATTAATAAAAATAAAAGCTGTTTTTTTTTGAGAAGATAAACAAAGCTGACATTTAGCCAAACTCATCAAGAAAAAAAGAGAGAAGAATCAAATCAACAAAATTAGAAATGAAAAAGGAGCGTTTACAACAGACAATGCAGAAATAAGAGACTATTATGAACAACTATATGACAATAAAATGGATAACCTGGAAGAAATGGATAGATTTTTAGAAACGTTCAATCTTCCAAGACTGAACCAGGAAGAAATAGAAATTATGAACAACCCAATTATAAGCACTGAAATTGAAGCTGTGATCAAAAATCTCCCCAAAAACAAAAGCCCAGGACCAGATGGCTTCACAAGAGAATTCTATCATTTAGAAAACAGCTAATGCTTAGCCTTCTAAAACTATTTCAAAAAATTGCAGAGGAAGGAACACTTCCAAACTCATTCTATGAGGCCACCAACTCCCTGACACCAAAACCAGACAAAGACAACACACACAAAAAGAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAAAATCCTCAATAAAATTCTAGCAAATAGAATCCAGCAACATAGTAAAAAGATCATACATCATGACCAAGTGGGCTTTATTCCAGGGATGCAAGGATTCTTCAATATTCACAAATCAATCAATGTGATACACCACATTAACAAATTGAAAGATAAAAACCATATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACATCCATTTATGATAAAAACCCTCCAAAAAGCAGGCATAGAAGGAACATACCTCAACATAATAAAAGCCATATATGACAAACCCACAGCAAACATTATCCTCAATGGTGACAAATTGAAAGCCTTTCCCCTAAAGTCAGGAACAAGGGTGCCCACTCTCATCTCTACTATTCAACATACTTTTGGAAGTTTCAGCCACAGCAGTCAGAGAAGAAAAAGAAATAAAAGGAATCCATATTGTAAAAGAGGAAGTAAAACTCTTACTGTTTGTAAATGACATGATCCTCTACATAGAAAACCCAAAAGACATCACCAGAAAATTACTAGAGCTGATCAATGAATTTAGTAAAGCTGCAGGATGTAACATCAACACAAAAATCCCTTGCATTCCTATACACTAACAATGAGAAAAGGGAAAGAGAAATTAAGGAAACAATTCCATTCATCATTGCAACGCAAAGAATAAAATAG TCONS_00184551 . 5' 73945 TCONS_00184551 . 5' 73945 EMBV3_09708 TTGGCAAACTGGATGTCTCATTTCAAAAAGGTTTCGGAATTGGTGAAGCAGTACAGACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18858 CTGGTGAAGGTGTGGGCGATGTGATGAGAGGTTTAAGAAATGGGTGAAATGAGATGGGGG Gene GeneID:281406|PKP4:XM_002685378:304_cdna Constitutive 0 NULL GeneID:281406 2 GENE PKP4 NULL plakophilin 4 EMBV3_38721 TCAGGCTTTTTGCACATGCCGTCCCCTCTGTCTGCAACATCCTTTTACTCATTCCGCCTG Gene BVT0102_174610 - 1 EMBV3_04929 GK000018.2:53829838-53834506 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28213 TCAGATGACTCCATTCTCCGGCTGGCCAAGGCTGATGGCATCGTTTCAAAGAACTTCTGA Gene GeneID:615178|RPS21:NM_001040581:1291_cdna Constitutive 1 NULL GeneID:615178 13 GENE RPS21 MGC133562 ribosomal protein S21 EMBV3_26013 AAGAATAGAACAAGAGGAAACAGGCTTAGACTGGAGTGTGAGGGAGCGTTTCCTGGCAGG Gene GeneID:513362|NPNT:XM_002688090:145_cdna Constitutive 0 NULL GeneID:513362 6 GENE NPNT NULL nephronectin EMBV3_21631 TAGAAAGTGTTCCTTAACTGTCGTGCAGGAGTCAGCAAATGAGGTGCCCAAGGGCCTCTG Gene BVT0102_214202 - 1 EMBV3_08364 GK000019.2:7899783-7939828 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098498 1 XLOC_058743 NonCoding TCONS_00098498 XLOC_058743 NonCoding NonCoding - 19:7937362-7937741 - TSS72874 379 1 TCONS_00098498_1 38 1 0 0 0 0 0 0 0 3.07742002973534e-05 0 0 5.42809496805576e-05 0 0 0 0 0 6.9687259853281e-05 0 0 0 0 0 0 0 0 1.82809334030497e-05 0.000316023762367301 0 0 0 0 NM_005082.4 TRIM25 Homo sapiens tripartite motif containing 25 (TRIM25), mRNA. 6e-18 95.1 67.58 0.746701846965699 0 noncoding CTTCCTGAGGGGCTGCCCCACCCACGCAGCCTCAACTAGGCTCCAGCTCTGCTGAAACCTAGCAGGCAGCTGAGTGGGGGGTACCCAGAGGCCCTTGGGCACCTCATTTGCTGACTCCTGCATGACAGTTAAGGAACACTTTCTACACACACTGTAATGTGTGCAAGAACACCCAACACCGCTTTATTGCACTCAAAGCTTCTAAGGCACGTAAGCCAGCCTTGGTCCTGGTATTTCTCATGCCTTTCCAAAGAATGGTGTCTACAACACTGATAATGTCCTAAAGAATCAACGCATAAAAATACAAGCTGAAGAACACAGGCTTAAATACTCCTAATTAAAACCAATGCAGGGTCGGACAGAATAAGGTAAGAAATAA TCONS_00094979 . 3' 1908 TCONS_00094979 . 3' 2286 EMBV3_10230 ATGGCTTCTACGAAGTAGACTACGCCAGCTTCCACGAGACCTTTGAGGTGCCCACACCTT Gene GeneID:614969|KCNJ9:XM_002685867:9_cdna Constitutive 0 NULL GeneID:614969 3 GENE KCNJ9 NULL potassium inwardly-rectifying channel, subfamily J, member 9 EMBV3_42012 CAGAGGGTCAGAAAACCCAGTAGCCCTTACTTCTTGCCCTGGGGATCTAAGCTCTGCTTT Gene GeneID:518657|TAL1:XM_002686411:355_cdna Constitutive 0 NULL GeneID:518657 3 GENE TAL1 NULL T-cell acute lymphocytic leukemia 1 EMBV3_32236 TCCTTAGCCCAGTGGAAACTCTTCCATGCCTTGGTTGCAGCAGATGTTGGTCCTCTTCTG Gene BVT0102_303171 - 1 EMBV3_24277 GK000013.2:47256121-47400412 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02844 TCAAGTGACTGAAGATGCTGTGCGCCGCTACTTGACACGGTAGCCCATGTCCACCAAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27134 GCTGCCCTGAGACCTTACAGGAAAAAGGGAGGCTTATCCGATTATGTACGGATTTGTGCC Gene GeneID:781470|LOC781470:XM_002696534:179_cdna Constitutive 0 NULL GeneID:781470 21 GENE LOC781470 NULL similar to Gag EMBV3_10025 TGACCCCTCGCTCAAAGTCCTCGTGGCCAACAACAGCGATACGCTCAAGCTGCTGAAAAT Gene GeneID:540712|FBXL3:NM_001102246:1_cdna UTR3_Alt 2 NULL GeneID:540712 12 GENE FBXL3 MGC151742 F-box and leucine-rich repeat protein 3 EMBV3_13109 CTGCACAGCGTCTGGGTGCTGGGCTTCTTCCTGTCCCTCTTCTCGCTGCAAGGTAAGTGA Gene GeneID:100337250|LOC100337250:XM_002684761:251_cdna Constitutive 0 NULL GeneID:100337250 1 GENE LOC100337250 NULL hypothetical protein LOC100337250 EMBV3_36519 GGGACCGCGGCTGTCAGGCCCAGAGGGCAGATGTGCTCTGCCCCAGCGTTCGTGTGGAAG Variant GeneID:521058|COL22A1:XM_002692600:370_cdna 92^658 1 EMBV3_24322 GeneID:521058 14 GENE COL22A1 NULL collagen, type XXII, alpha 1 EMBV3_13337 GGCAGTGAAAGTGAATCTGCTAGTGATAAAACAGATTGGAATGCAGCCAATGCAATAGAG Gene BVT0102_071010 - 1 EMBV3_41016 GK000015.2:58063863-58144411 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059715 TCONS_00059709 TCONS_00059710 TCONS_00059713 TCONS_00059716 TCONS_00059718 1 XLOC_036490 Coding TCONS_00059709 XLOC_036490 Coding Coding ANO3 15:57641550-58133700 j TSS44752 5900 1 TCONS_00059709_7 608 0.0430508474576271 26 0.988064590195246 7.59516977585251e-84 1.99725062324872e-13 5.07873482103716e-05 2.56748143874023e-05 6.76955888687061e-19 1.13505545611789e-05 2.99798315094918e-07 8.2896704684932e-05 5.6944147155169e-34 2.57301251922386e-25 9.18181726837526e-28 2.00361063269073e-14 0 0 2.76541562539974e-31 1.86975659038223e-19 3.02994133268622e-06 8.00146622904911e-07 4.560209787506e-05 0.000151135888744447 8.82121292697887e-12 5.59220073290073e-09 6.72708218579661e-06 0.000167503200690626 8.06365731102054e-12 9.20712580132264e-09 0.000101786619159141 8.06349452073711e-38 9.12750743594157e-06 4.87514817697932e-05 XM_005216263.1 ANO3 PREDICTED: Bos taurus anoctamin 3 (ANO3), transcript variant X1, 0.0 9019 100.00 0.847457627118644 XM_005253063.1 ANO3 PREDICTED: Homo sapiens anoctamin 3 (ANO3), transcript variant X1, 0.0 3842 85.41 0.568474576271186 TCONS_00059709_7 sp|Q9BYT9|ANO3_HUMAN ANO3_HUMAN Anoctamin-3; 0.0 1181 95.72 0.998355263157895 1 coding 0 0 0 0 -0.0195609800739453 0.896549179795282 -0.0295908129838378 0.627257926826677 ATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAACCCAATTCTTCGAAAGGAGAAAGTGCTGCAGTAAATGGGGTAAAGGAATGATACAACCAGTGAAGATCAAAGAAGAGTATCAGATTTGTCTGTAACAATCTGTTATTTCCAATGGAAATTATTTTGTCACTCACAGGAGTCTTTCATCAGCCTTAAAATGGAGCTATTTAATTGGTATGAATATAAGCAAGAGTGAGATAGCAAAAGAAACTTCATTAAAACCATCTCGGAGATCCTTGCCTTGCCTGGCCCAAAGCTATGCTTACTCAAAGAGCCTGAGCCAGTCTACCTCACTCTTCCAGTCAATTGAGAGTGAATCTCAGGATCCCACTTCTGTAACCTCAATCTCCGCTGACAAAGCAGAGCAAGTTAACACTGAGGAAGAGAGAAAAGATTCTGTGCTCAAATGTTCTTTCACCGACCTCAGTGATTTTTGCTTGGACCTAGGAAAAGATAAGGATTACACGGATGAATCAGAGCATGCTAATTATGATCGATCTCGCCTCATTAAAGACTTTGTTCCTAAAAATAATTCTGAACCGAAGCCCAGATTACCTAAGAATGACATGAATTACATAGCATCCAGTGGACTTCTATTCAAAGATGGCAAAAAGCGGATTGATTACATCTTGGTTTATAGAAAGTCAAATATACAATATGACAAAAGAAACACATTTGAAAAGAACCTCAGAGCGGAAGGCTTAATGTTAGAAAAGGAGCCAGCTGTTGCAAACTCGGATATCATGTTTATTAAAATTCACATTCCGTGGGACACACTGTGCAAGTATGCAGAGAGACTGAATATTAGGATGCCCTTCAGGAAAAAATCTTATTACACTGACCGGAGGAGCAAATCAATGGGCAGGGAGCCTATAAAAGTAACCAACCCATCAAAACCCACGGACCTCAGAATAACAGACATCTATTATATGAACGCTGGGCACGCTGGGGAATGTGGTACAAGCATCAGCCCCTGGATTTAATCAGGCTGTACTTTGGTGAGAAGATTGGATTATACTTTGCTTGGCTGGGGTGGTATACTGGAATGCTGATTCCTGCAGCCATTGTTGGCTTGTGTGTGTTCTTCTATGGAATATTAACAATGAATGCAAGTCAAGTAAGCCAAGAAATTTGCAAGGCCACTGAAGTCTTCATGTGCCCTCTCTGTGATAAGAACTGCTCACTGCAGAGACTCAACGAAAGCTGTATCTACGCCAAGGTGACATATCTGTTTGATAATGGAGGGACAGTCTTCTTTGCTATTTTTATGGCAATATGGGCCACAGTCTTCCTGGAGTTTTGGAAAAGGAGAAGAAGTACACTAACCTATACTTGGGACCTTATTGAATGGGAAGAAGAGGAGGAAACCCTTCGTCCCCAGTTTGAAGCAAAGTATTACAAGATGGAGCGAGTGAATCCTATCAGTGGAAAACCTGAACCACATCAGCCTTCCTCAGACAAAGTCACTCGTCTTCTTGTTTCTATCTCAGGAATATTCTTCATGATTTCCCTGGTGATCACTGCAGTGTTCGCTGTTGTGGTGTATCGCCTGGTTGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCATCAAACAACACTGGCAGTTTGCAACTTCCGCTGCTGCAGTCTGTATCAATTTTGTAATCATTATGGCACTGAATGTTGCTTATGAAAAAATTGCTTACCTTCTCACTAATTTAGAATATCCTCGAACAGAATCTGAATGGGAAAACAGCTTTGCTTTGAAGATGTTCCTCTTCCAATTTGTCAATTTGAACAGTTCTATCTTCTATATTGCTTTCTTTTTGGGGAGATTTGTTGGCCATCCAGGAAAGTACAATAAACTTTTCAACCGGTGGAGACTAGAGGAATGTCATCCCAGTGGCTGTTTGATAGACCTTTGCCTCCAGATGGGAGTCATCATGTTTTTGAAGCAAATATGGAACAACTTCATGGAACTGGGATACCCGTTGATCCAGAACTGGTGGTCACGACATAAAATCAAGCGGGGAATTCAAGATGCTTCCATCCCTCAATGGGAAAATGATTGGAATCTGCAGCCCATGAATATTCACGGACTGATGGATGAGTACTTAGAAATGGTTTTGCAGTTTGGTTTTACTACCATCTTCGTTGCAGCTTTTCCTCTGGCCCCTCTTTTGGCTTTGTTAAACAATATCATCGAAATCAGGCTGGATGCATACAAATTTGTCACCCAGTGGCGGAGGCCTTTGCCAGCCCGAGCAACCGACATAGGTATCTGGTATGGAATTCTTGAAGGAATTGGTATATTGGCTGTGATCACTAATGCGTTTGTAATTGCTATAACATCTGATTACATCCCACGTTTTGTCTATGAATACAAATATGGCCCCTGTGCAACTCATTTTGAATATAGTGAAAGTTGTTTAACAGGATATGTCAACAATAGCCTATCCTTCTTTGACCTGAGTGAACTTGGCATAGGAAAATCTGGGTATTGCAGGTACCGAGACTACAGAGGTCCTCCTTGGAGTTCCAAACCCTATGAATTCACCCTCCAGTACTGGCATATCCTCGCTGCTAGATTGGCCTTCATTATTGTGTTTGAGCACCTTGTTTTTGGGATCAAGTCTTTCATCGCATACCTGATTCCGGATGTACCAAAGAACCTATATGACCGAATAAGACGGGAGAAGTACTTAGTCCAAGAAATGATGTACGAGGCTGAACTAGAACACTTGCAACAGCAGCGGAGAAAAAGTGGTCACCCTGTTCACCATGAATGGCCTTAGTGGATCTGTTGCCCAGTGGGGGCAATACCGTTAGTGGCAAATTATAATTCTAGGTGGGATCTAAGAGGAAGGCATACCTGGCAAACCACATGTATAATATGATACTTGGAAATACATCATAGCCATCTCTGGATTTGAAATATCCAGTCGTCTAGGGAAGAAGAAAAATGGCTCATGACCTTAAAAAATGGTTAGATTGAGAGTGCAGGAAGCCAGGGTCTAATTCTCAGAACCAGCCTCAGGGAGTTGTGTGTTTGGAAACCTCCACCTTCCATCAACACAGTATACGAGGGAGGGTGATGATGAGGTTTCTAATGACAGATTTCCATGTAAATGTACACAAGTCAGGCATGACTTAAAGTATCATGTGGTCCTCATGTGCACACTAATCTGACTTTGGAACCTTAGGTTGAGTTGAGCTACTTACCAAGAAATGACAAATTAGTTATTGCCTTTGCTGCCAGAACTCTGCATCCCTTCAAGTTACTGTTTTATAAGAATTTCCTTTGTTTCCTGCTGGGATTTTTGGATCTCTGTCACAGGAAATTCATGTTGTTTTTCACTGACTATGCAGTTGAAGAGTTGCACAACTTCAGTAGTCAAACCAAAAATCTAAGACTCCAAAAAGAATACCATTCATTGAAATAATACTCTATTGCATTGGCTGCATTCCAATCTGTTTTATCACTAGCAGATTCACTTTCACTGCCTTTTTTTCTCCTTTACTAAAGGCCAATGGAGTCATATTGTTATAAAATATGGATGCTCATTCTCATATCATTTAGAAGATAATGAATCCATATTTTACTGTGGAAGGCTGTTTTCTAGTATACTTAATTTCCACCTCCCTGATTTATTACAGTTCTCACAGAATAACTTGAAATGCTGTAAATATATTGATTTTCCTTGTACCTTTGCACCTTGCAATATGGAACCCAAGTTATTAATACAATTCATGCAGCTCTGAGACCAGTTACACAATATTCCACTGTAGCTTGTTTATTCAGGAAAACAGAAGCCAGATGCTTTGCAACATATAAGCTTTTCCAACAATGTGCACTCTTGCTCGTGAGCTGATGAAAACAATGCATGAATATAAATTTATATTATTTGTAAAAGAACACATTTTTTTGAGTCTTACTTTCTCTTCATCACTGAAGGGAGTTTTCTGTTATTTCTTTGGTAGATTGATTTGGTTTATTTTTGAAAACTCACTAGAAACAAAGTCAAATTAATTGTGAAAGACATTGTTTTTGCTTGTTGTGGAGTTGCTGTTTCTCTGAACTCTGTGAGCATGAATGTTCACAGACTGATGTTGAGGAGGCATTCAAACAAAGTCTGGTGGAGGCATAAACTATGGGGGCAGGATGGGAAGAAAGAGAAGAGTTGAATTAAGAAAATATATAGTAGAAATCAAGACACTTTTTCTTGCAAAACAAAACTAATCTCAATTTTCTTCTTCTGGGAATGGGATTAGGCATGCATAGTCATGGTGGTGGTGGTTCAGTTGCTAAGTCATGCCCATTTTTTTGAGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGACAAGAATATTGGAGGGTTTGCCATTTCCTTCTCCATGGGATCTTCCCGACCCAGGGATCGAACCCAAATCTCATACATTGACAAGCAGACTCTTTACCACTGAGCCACTAGAGAAGCCCATATGTAATCATGCATTCATACACATATGCGGTTGTTTTGTGTGCCGTTTAAAGGTACAGTTATTTCCAAAATTTATAAAGACCTGTGGAAATAAAACTACTTTGTATATATGCAAGGGTTTCTCTAGCAAGAAAAATCATAAAGTTTCTCTTCACTATTTAAAAAATTTTAACAATGAAGTGTTTTTTGTTTTGTTTTATTTTAGTTTTCCTTCTTTCTCTCCAGAGATAAATAAATCACAGTGGTTGGTTGATTTTTGTCAAAAATACTTACTTCCCTACCTGCCCTCTGATTCTGAGCAAGAGGAAGAACTTCAGACTCTAAATGTCCCTCCCATTCCCTTGTCTCAAGGAATTCTTCCATTCAGATTCCAGAATCTTCCTCAGATTCCAGAGAGGTTTTGTTTCTGCCACCTGCCTATTCACAGTAACTAACTGTACTAATTTCACAAAGAAACTTTAAATACTTCCATTTTGTAGCATCTGCATTTCCTTTTCTTTGTTTGTTAAATATATACTCATGCCTGAGGATAAATACTCTCTATGCCTATTGAAGACATAAAAGAACCTGACATTTATGTCCTTTAACAATTAGGGACACAAGGCAAAACCATTTGCCTTATAGTAAAGAATACAGATAGCCCTTGAGAATTTGTCTCTTTCTGAGTTATTTTTATACAACCATATAAAATCATATTGATTACCTAGCAGGAATAAATGAAAAGAAAAAGGTATTTTTAATAAAAATTATGATACATTGATTTAGGAAATGCCTTCTCTGATATTTTTGAAATCGATGGAAAAACAGAGAAACAATGAAAAACATTATCTGAAATTCTCCTTTTGTGAAGCAATGCAGTAGAATCTAGTTATATCTTCATCATCGTTGACAGCAAAATATTGACAGCCCCTCACAGTATATCGGTTTTAGACAACTCAGCTTTAGTTGAGAGAAATATTTTATATCATGGTTTTCGTATGAATACAAATTATTTCTCAAAGATTTATATAACACACTATTCTCAGGAATTCTGTATTACATGAATGCTGCTTATATATTTTCTTATTCTAAATTGTTGTCTTTTCAAGCAGATAACTAATATATACATGTATGTGCATGCTCTCAGCCTTGACAAGTTGCGCCAGGCTGTAGCATTTTCATTGTACAGTGTGTGGAAAATTGCTCTAGGTTATAGCTGAAATTGTTTGCAGTTGTCTGAGTCCGTGCACGCACTTTGAGATAAAATGTGCCTGAGTGACTGCATGAGGAGATACAACTTCTGAATGCTGCATATTCTTCCAAAATGACTCTTAGCACAATCTGTTGTAGAATGCGATGAAAAGGAATCTTTTTCACTCAATAAATTTTCATGTGAGATGG EMBV3_12354 ACGTGTGAACATTGTGCCTGCAAGAGTGTGTTTCTCATTAGCCCTCTTCCCTGGTGGCGA Gene BVV0102_023082 - 1 EMBV3_12511 GK000004.2:69327845-69331791 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181907 1 XLOC_110724 Coding TCONS_00181907 XLOC_110724 NonCoding Coding HOXA9 4:69329956-69334928 j TSS136049 1709 3 TCONS_00181907_1 67 2 0.656608328304164 0.000128070688832284 1.94435084344423e-21 0.000295366193963927 4.75000410785094e-53 5.71042124847034e-14 1.00135561048788e-50 6.56776002451303e-05 1.88456556081281e-08 5.08210329394487e-11 0.000178756817350099 4.90635682163869e-06 9.16198914466225e-20 1.43940238748679e-37 1.7410343737083e-158 0.000105623110755205 4.90604759334968e-18 6.33992508517551e-05 4.33221091189447e-05 4.11524206053868e-05 2.45882163107881e-22 1.41343050902838e-05 2.1080134724539e-10 5.30136749867777e-05 0.000297709467831913 1.59010209706186e-72 4.86297611105746e-16 2.53039586948197e-34 5.58876697315268e-89 3.10380908977838e-11 9.10280409440413e-12 NM_001105617.2 HOXA9 Bos taurus homeobox A9 (HOXA9), mRNA. 0.0 2526 100.00 0.818607372732592 NR_037940.1 HOXA10-HOXA9 Homo sapiens HOXA10-HOXA9 readthrough (HOXA10-HOXA9), non-coding 0.0 1590 85.26 0.818022235225278 0 noncoding 0 0 0 0 0.0361642361854428 0.789884251680647 0.0109239609775405 0.813926690457796 CCTCTTCCGGCGCGAGCAGAGGAAGGGGCACCCGGTGCCTCTCTGCGCGGCTCCGCAGCCTCTTTCTCCGGGAGAGCCTGGCATTTGCGGGTTTTCGCCTGGGACAGGGATGTATCAGGGTTTGGGGGGATTACTGGAACTGTTGGGGAGGATGAAGGAAAAACAGAAGATGGAAGCGACCGATGCCGCCCGCCTGCCCTCGCCGCCAGGGAAGAGGGCTAATGAGAAACACACTCTTGCAGGCACAATGTTCACACGTGAATTTAATTACCCCCTTTTAGGGGTCGCCTCTTTCTGTTCGGATTGGGGGTAACCCGGCTGCCAACTGGCTCCACGCTCGCTCCACGCGGAAGAAACGCTGCCCCTATACAAAACACCAAACGCTGGAACTAGAGAAGGAATTTCTGTTCAACATGTACCTCACCCGGGACCGCAGGTACGAGGTGGCCCGACTGCTCAACCTTACGGAGAGGCAGGTCAAGATCTGGTTCCAGAACCGCAGGATGAAAATGAAGAAAATCAACAAGGACCGAGCAAAAGACGAGTGATGCGACTCGAGTTCATTTAGAAAAGAGAGAGTGAGCTAGAGAGAAAGAATTGCCCGTCCTCTTCTCCTATCCCCACCCAACCCCACCCCACCCCAGCCTCCACCACCCTAAAAAGGCGGTTGGAAACTCCAGGCCTCATGTCCTAGGCAAACCCTGTTCAGGCTGGTTCCTTGGCCTGCCACTTTGATGGAGGAGGTATTGTAAGCTTTCCATTTTCTATAAGATTAAAAAAAAAAAAAAAAGGCGGGGGCATTAGCGCTGATGGCTATATGTGCTAGCTTGTATATATTAAAAAAAAAAAAAAATCTACCTGTTCCTGACTTCAAACAAACAAAAAAAACTACCTTTTTATAATGCACAACTATTGACGGCGGGCTGTATAGTTTTTAGACTGTGTGTAGTTAATTTAATTTGCTCTTTGTGCGGCAGAGCGATCTGCCCAGATACTTGAATACTGTGTTTTATTGTGGTAATTATGTTTTGTGACTCAAACTTCTGTGATGGGTGATGCACCCGTTGTGATTGTGAAAGCTAGAATTCGATTTGAACTCAGGTTGTTTATGAGGGGAGAAAGCAGTTGCATAGAGTATAGCTCTGTAGTGGAATATGTCTTCTGTGTAACTAGGCTGTTAACCTTTGATTGTAAACTAGCTGTAAGGATTTCCCAGTAACATAAAATTTTAAAACAAAAAAAGAAAGCGTTCTCTGGGATGCATAGATTCATGATTTTCTCCATTCTTGAAATGCGGACATTTTAGTTTCTACATGCTCTCTAGACCTATCTCGTCCATTGTGTATATATAATCCACATATTAAAGAAAAAGTAAACAAGCTTGAATATTGTTTTTGCACCAAACAGTGAGGAAATTTGGAGCTATACTACGTATGTGCAGATGGTTACTACCTATGGTTTACGTTTAATTTTAATTGGGGGAAAAATGAATGCTTATTGTAATGGAGTTAATTTTATTGATAATAAATTATACACTATGAAACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGGCTGAACGCACACTGTATATTTTGCAATAGTTACCTCAAGGCCTACTGACCAAATCGTTGTGTTGAAATGATATTTAACTTTTTGCCAATAAAATATATTGATTCTTTTCT EMBV3_40729 CACCTGTGTCCCACCTGGAGGAGATGTTAGCCCATCCTGACAATAACAGGCAAAGGCTTT Gene BVT0102_123327 - 1 EMBV3_05776 GK000002.2:12360692-12963344 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32473 CAGAGACTTTTAAATAGAAGAACAAACTAGTGGTTACCAGTAGGGAGAGGAGTACCAGGG Gene BVT0102_231970 - 1 EMBV3_04634 GK000001.2:53368941-53528681 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003308 TCONS_00000637 TCONS_00000647 TCONS_00003305 TCONS_00000648 TCONS_00003306 TCONS_00003304 TCONS_00000624 TCONS_00000642 TCONS_00000620 TCONS_00000638 TCONS_00000628 TCONS_00000621 TCONS_00000632 TCONS_00000625 TCONS_00003307 2 XLOC_000831 XLOC_000165 Coding TCONS_00003305 XLOC_000831 Coding Coding MYH15 1:53523011-53623902 j TSS1705 5929 1 TCONS_00003305_5 1276 0.112497891718671 26 0.94149073248092 0.000427351160896387 0.00100903762956895 0.00155402290797947 0.000612394131212755 0.000284952168417567 0.000474249603219866 0.000473730187225515 0.000633968793474228 0.00153866373910634 0.000115969021874983 3.61556528335349e-05 7.8415411937039e-05 0.000231123955298412 0.000313380920013497 0.000668870075059096 2.43098536074058e-05 1.64628743938368e-252 1.14064104381803e-81 0.00170055260203573 0.000630822318818539 1.85294161141585e-09 3.36023170076862e-45 7.19170767436692e-05 1.89294197886125e-42 0.000466218872128941 0.000933747398093194 7.89070797322273e-05 1.16057315226726e-05 1.97887594919082e-05 2.22557056554696e-12 XM_002684737.3 MYH15 PREDICTED: Bos taurus myosin, heavy chain 15 (MYH15), mRNA. 0.0 6919 100.00 0.646820711755777 NM_014981.1 MYH15 Homo sapiens myosin, heavy chain 15 (MYH15), mRNA. 0.0 4405 84.94 0.662168999831337 TCONS_00003305_5 sp|Q9Y2K3|MYH15_HUMAN MYH15_HUMAN Myosin-15; 0.0 1906 78.84 0.999216300940439 3 coding 1 0 1 1 -0.0773120510174077 0.651388211688385 0.0243610132040521 0.71941365450797 CTTCCCCTCCCCTGCTTGGCTTCCCTCCTTCTCCAGATAAATCTCTTGAACCAGAAGCTCCACCTCAGATTCTGCTTCCAGATGAAGATAAAATTTTTACAGACAGAATACTTGAGAAACAATTTCTTTCTTCAAGTTATTTTATTGCCCTTCCATAAATTATTGTTACCAAATTGCTACCAAACAGGTAGATATGATTCACAACAGAACAGTTAGATAAATATTGACTTGTCATAGGAAGAAAATAATGTATTTTGGAAAACCTAAATAAATTAATGACTAAGCTGAAATCAACTGCACCTCATTTTGTGAGATGCATAAATCCCAATGTGAACAAAACACCAGGTGTAATGGACCCTTATTTGGTTCTACAGCAGCTGCGCTGTAATGGTGTCTTAGAAGGGATCACGATATGCCGTGAAGGTTTTCCACACCGACTGCTGTATGCTGATTTTAAGCAAAGGTACTACATTCTGAACCCAAGGGTGTTTCCAAAGAGCAAATTTGCAAGCAACAGAAAAGCAGCTGAAGAATTACTTGACTCCTTAGAGATAGACCATACCCAGTACCGCTTTGGAATCACTAAGGTGCTTTTAAAAGATGGCTCTCTGAGCAAACTGGAAGCCATGAGAGATGAGAGATTATCAAAAGTCTTCACATTGTTCCAAGCCAGAGTACGGGGAAAACTGATGCAAATCAAATTCCAAAGGATTCTGGAAGAGAGGGATGCACTTCTTTTGATCCAGTGGAACATAAGAGCTTTCATAGCTGTGAAGAGCTGGCCTTGGATGAGGCTCTTCTTCGAGATCAAGCCTCTTGTTAGATCTGCTGGAATGGGAAAGGAGGGAGCTGGACTGAAGGAAGAGTGTATGCAGCTGCAAAAAGCCTTGGAGAAGTCAGAATCTCAGAGGGAGGAGCTGAAATCAAAGCAAGTCTCCCTCCTCCAGGAAAAGAATGATCTGCTTCTTCAGCTGCAGGCTGAGCGAGAGACCCTGGCAAATGTTGAAGAGCAGTGCGAGCTGCTGATTAAATCCAAGATCCAGCTGGAGGCCAGCGTCAAGGCGCTGTCTGCGCGGGTGGAGGAAGAAGAGGAGATAAATTCCAAGCTGACTGCCAGGGGGCAGAAACTTGAAGATGAATGTTCTGAGTTGAAGAAAGAAATCGATGACCTGGAAACACTATTGGCGAAGTCACAGAAGGAGAAGCATGCTACAGAGCTCAAGGTCAAGAACCTGCTTGAGGAGGTGGAGTCTCTCAATGAGGATGTGAGCAAACTGCATCGAGCAGCCAGGGCTGCACAGGAGACCCACCAGCAGACCCTGGAGGACTTGCGCAACGAGGAGGAGAAAGTCCACACCCTAAGCAAGGCCAAGTTGACGCTGGAGCAGCGAGTGAATGAGCTTGAGGGTGCCCTTGAGCAGGAGAGCAAAGCAAGAATGAACTGTGAGAAGGAAAAGTGCAAAGTGGAGGGCGAGTTAAAGCTGAACCAGGAGAGCATGGACGACCTGGAGAGCAGGCAACTGCAACTAGCAGAAAAGCTGAGGAGGAAAGAATTAGAAATGAATCAGATGAGGTCGAAGGTGGAGAATGAGAAAAGCCTGGTGGCTCAGCTTCAGAAGACGGTTAAAGAGTTCCAGACTCAGATACAACTTTTGAAAGAAGAATTGGAAGCTGAAAGGACCACTCGAGCCAAGGTAGAGAGGGAGAGAGCTAACCTCATCCGAGAGCTGGAAGACATGAATGAGAGGCTGGAGGAGGCAGGAGGTGTCAGTTCGGCTCAGCTGGAGATAACTAAGAAACAAGAAACAAAATTCCAGAAGCTCCGCCGAGACCTGGAAGAGGCCACACTGCACTTTGAGGCAACCTCTGCCTCTTTGAAGAAGAGACACGCAGATAGCCTGGCTGAGCTGGAGAGCCAGGTAGAAAATTTACAACAGGTCAAGCAGACACTGGAAAAAGACAAGAGTGACCTAGAGCTCGAAGTGAACGATCTCCTGATCCATGTTGAACAGATGACCAGAGCTAAGGCTAATGCTGAGAAGCTTTGTAGTCTGTATGAGGAACGCTTGAAAGAAGCAAATGCAAAACTGGATGAAGTGACTCAATTAGCAAATGACGTGACAGCGCAGAAGACAAAGCTACGGAGTGAGAATGGTGAGTTACGGAAAAGGCTGGAAGAAATGGAAGCTCTGATAAACCAACTTTCCAGGGAAAAGAGTATCTTCACTCTGCAGATTCAAGACCTGAAAGGGCAACTGGCAGAAGAAACCAAATCACAGAGTGCCCTGGCCCAGGCCGTGAAGTCGGCCAAGCGTGATTGTGACCTTCTACGAGAGCAGTACGAGGAAGAGCAAGCAGCCAAGGCTGAGCTGCTGCAGGCCCTGCTCAAAGGCAATGCTGAAATGGTGAAGTGGAGGACCAAGTACGAGGATGACACCATCCAGCGTGCTGAGGACTTGGAGGATGCCAAGAAGAAGCTGGCACTTCGGTTGCAGGAGGCTGCGGAAGCCATGGGGGTGGCCAATGCCAGAAACGCCTCCCTGGAGAGGGCCAGGCTCCGACTGCAGCTTGAGCTCGGGGACACCCTGTCTGATCTCGGGCAGGCGCGGTCTGCGGCTGCCGCACTCAACCAGAAGCAGCAGCATTTTGACAAGAGCCTGGACGACTGGAGGCGGAAGCACGAGGAGTCCCAGGCGATGCTGGATGCCGCAAAAAAGGAGGCCCGCGCCCTCAGCATCCAGCTCCTGGAGCTCAGGCACAGCTACGAGGAGGGCACCATGAGCCAGGAGGCCCTGCGGAGGGAGAATAAGCACCTGAAAGAGGAGATTTCTAATCTGACAAATCAGGTGAGAGAAGGAAAGAAGAACTTAAGTAAAATGGAAAAGGTCAAGAAACAGATTGAACAAGAAAAGAATGAAGTTCAGATGGCATTGGAAGAGGCTGAGGGAGCTCTGGAGCGTAATGAAAGCAAGGTTCTTCGTTTGCAGCTTGAACTCTCAGACACTAAAGCGGAACTTGAAAGGAAGCTTTCAGAGAAAGATGAAGAAATAGAAAATTTTAGGAAGAAGCAGCAGTGTGCTATTGACTCCCTGCAGTCGAGTCTGGATTCCGAAGCTCGTTGCAGAATTGAGGCCACCCGGCTGAAGAGGAGTATGGAAGGGGACCTCACTGAGATGGAGCTCCAGCTTAGCTGTGCCAGCAGGCAGGCATCAGAGGCCACCAAGTCCCTGGGCCAGCTCCAGACCCAGGTCAAGGACCTGCAGGTGCAGGTGGATGACAGCACATGCATGAACAGCGAGCTGAAGGAGCAGGTGGCGGTGGCCGAGCGGCGCAATGCTCTTCTCCAGGCTGAAGTCGAGGAGCTAAGGTCCTTGCAGGAGCAGACAGAGCGCAGTCGCAGGCTGGCAGAGGAGGAGCTCCTGGAAGCCACGGAAAAAATCAATCTTTTCCATGCCCAGAACACGAGTCTCCTCAGCCAGAAGAAGAAACTGGAGGTGGATGTAGCCAGGATGCAGAAGGAAGCTGAGGAGGCGATGCAGGGCTGTCAAAATGCAGAAGAGAAGGCCAAGAAGGCAGCCACTGAGGTAGCAAACATGTCAGAAGCACTGAAGAAGGAGCAAGATACCAATGCCCACTTGGAGAGGATGAGAAAGAACATGGAGCAGACAATTAAAGACTTACAAGAAAGGCTGGATGATGCTGAGCAGACAGCCATAGTGGGGAACAGAAAGCAAATCCAGAAACTAGAATCCAGGGTTCGTGAACTGGAGGCTGAACTGGAGAGCGAAGTCCAACGTAACTCGGAGGCCCAGAGGGGAGCCCACAGGCTTGAACGGTGCCTCAAGGAGCTGACCCATCAGGTAGAGGAAGATAAGAAAAATATGAGCAGGATGCAGACTCTGATGGATAATCTTCAGCTAAAAGTACAAAGTTACAAGCAGCAAATCGAGTCAGCAGAAGCAGAAGCAAGTCAATACCGTTCCAAGTATAAGAAGCAGCAACATGAGTTGAATGAAGCTAAGGAAAGAGCAGAGATAGCCGAATCTCAAGTTAATAAACTCAAGATGAAAGCAAAAGAGTTTGGGAAAAAGGTCCATGAAGAATGAGCCATCCTCATTTATAAAGGATAGAGGCTGGAAAAATACAAGGAGGTACTATTTTCTGACCAGAAACTTAAGTTGCATTTGAAGTATACACCTTTAGATTGATGCACAGCTGCTTTACAATGTTATATTAGTTTCAAGTGTAATAACATAGTGCTTCAATATTTGTAGGTTATACTCCAGTTAAAATGACTATAAAATACTGCTTATATCCTCTCTGGTGCACATTGCATTCTTGTGTCTTATATATTTTGTACCTGGTGCTTTGTACCTTTTAATCCTCTTTCCCTCCCTGGTACTCCTCTCCCTACTGGTAACCACTAGTTTGTTCTTCTATTTAAAAGTCTCTGTTTTGATATATCCACTCATTTGGGAAACATTTTAAAAAATATGCTGCATCAAAAGTAGTTTAAACAAGGTGATCAGGAAACGTAATAATAAAAGGAAATATTGTTGCTTTCAAGGGTAGTGGGGAATTTTTTGATCCTCAGATATAAGTAAACATTTCACATGAAAGATTAAATAGATTCAAGAATCTTTTAAATTTTGATGTTTAAAAAAATACTTTGTTCATATTGCATCTTAATGAGTAATATTCATAGATGACATGAGCTATGTTATGGTCCCTGGGGAGTTCTGCTTGACTCATTTCTACATCCATGAGTCTATTTTTAGCCACTGACGGTGGGAGACAACAGGCTAGTCTTAGTGTTCTACAGTGATTTACCTATAGTCATAGTTAGGTAGGAGGGTTTTCCTGACACAAAGCATGTATGCTACATGCTGGGGCAACACTGAAGCACCCTCCCACACGAGATGCTCAGTTTAGCGATAACTGGTATGCTGTCTGTATTGTACCAATGTGGCTAAGCTGGAGGTACGTTTCCTAGAATTCCCTTCTCTCTGTGGTTCTGGATTACAGTTGGTCACAAAAGAAAAATGCACCCGATTTGAGAGGCAGAAGTGAGGGAGAAGATATTGTTTTTATGCTCATACAGTCAATGTATGGTCCCAGTACAGTGATAGCTGGCAGATATTCCTCAAGGCTGAAAGGGTGAGCTAGCTGGGATGGGCCGCAGCTCCTGTCAGAGTCCTCACCAGGCAGGCCTGTGGCTCCATGGCAGTAGGCGCTGGCCTGTCTTACAGGTCACTCCCAGCATAGACTCTAGAGGCTCCAAGAGACAGCATGGGATCCAGTTTGTTCTTATAAATTCCAGCTCATCCTCACTCCATGTCCAGCTCTCCTTCCTGACACTGGCACGTCTGCCCAACAGCGACCTCAGGGACAGCACCAGATGTGGAGGGGGCAGGCTGGCGCAGACTTCTTCACCGCTGCCCACGGTGGTACAGTGTTGAACGTCTATGACAAATCCTTGTTCTGTCATTCTCAGCACTCTGCCTCTCCGATCCAACCTGACTCTAAGATTAAGCTCAGCAGTGTTGAAAGACACAGGGTCCTTCTTATCTGCCATCCTCAATGTGCTGGCTTTGGTCTTTAAATTTGTCACCCTCATCACAGTAAGATTCAGTTCTGAGCATATTCTCCTCACCAAGTGCCCTATGTCCTTTTCTACAGATTTTCTTTATGCGTCCTTAGTACTCTACAATTTGTGATGGACACTGGTCACAACACTGCAGCACATACCTGAAGTCAACAAAACTCTGTGCAAAACAGACTGTGAATGAGTCCGCTGATACAGAAAACTGGACCAAGTGGCATTAACACACAACTGGGCTCGAGGGGCCACCGACAGCAACAAAACTGCCGATACAACGGCCACCAAAACTGGAACAATTATCCCAGCAGGCGCTCTTGGGCTTGCTTC EMBV3_12089 CAGCTGGAAAAGCTGAAAGAGCAGCTCATGGAAGCAAAGGATGCTGAGATGTCCTATGCG Gene GeneID:614653|UTS2D:XM_002684834:170_cdna Constitutive 0 NULL GeneID:614653 1 GENE UTS2D NULL urotensin 2 domain containing EMBV3_07349 TCACCAAGAGTGAAATTCCTGGCTTCCTGAGAGACTTGGAGAATGCCTGTCTGAAGTACC Gene GeneID:616574|LOC616574:XM_002695553:47_cdna Constitutive 0 NULL GeneID:616574 19 GENE LOC616574 NULL similar to Phosphatidylcholine transfer protein (PC-TP) (StAR-related lipid transfer protein 2) (StARD2) (START domain-containing protein 2) EMBV3_06546 CACCCCTCCAGGTTAGCACATTTTAATGTGAGAAGTAAAATTATTATGCTTTCAGATTTT Gene GeneID:510775|OR12D2:NM_001098382:2_cdna Constitutive 0 NULL GeneID:510775 23 GENE OR12D2 NULL olfactory receptor, family 12, subfamily D, member 2 EMBV3_43343 ACCGCAGAGTTCAAGGAGGCCTTCCAGCTGTTTGAGCACTTCCTACCCATGCTGCAGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35240 TACCCTGTGGAGAAATCAGAGAGGTCGCCCACATACGGTGTGCAGCCCAGACCCTCAATA Gene GeneID:617967|IL21R:XM_002698044:14_cdna Constitutive 0 NULL GeneID:617967 25 GENE IL21R NULL interleukin 21 receptor EMBV3_00943 CAGGCCTCAAATCTCCTGGCCCATCAGAGAGTCCACAGTGGGGAAAAGCCATTCAAATGT Gene GeneID:789006|ZNF226:NM_001102350:469_cdna Constitutive 0 NULL GeneID:789006 18 GENE ZNF226 MGC166175 zinc finger protein 226 EMBV3_18587 ATTTACTGGTGAGAGGCAAGAGAGGCATCACAGTTGATTTTAGGGCAAGGGAGGGGAACC Gene BVT0102_025695 + 1 EMBV3_34323 GK000026.2:37936024-37939959 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25947 CACTGTGAGCTGCTGAAACCAGGGAACCACGTTTTATTCATCTACCCCTTCCTCGGTCCA Gene BVT0102_060109 + 0 NULL GK000014.2:39402264-39504462 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051782 TCONS_00053368 TCONS_00053372 TCONS_00053366 TCONS_00053369 TCONS_00053371 TCONS_00051781 2 XLOC_031290 XLOC_031699 NonCoding TCONS_00051781 XLOC_031290 NonCoding NonCoding - 14:39465565-39542400 - TSS38545 1553 2 TCONS_00051781_1 66 0.233097231165486 4 0.979839654319702 0.000410248153944748 0.00123100166007224 0.000516793857103873 7.68014968356617e-05 9.21838334210115e-05 0.000103685241909125 2.17780757331643e-59 0.000175757967216824 9.31521822045078e-05 4.26933765618674e-05 0 0 4.55260267809584e-24 5.3439583829145e-61 0 0 0 0 0.00158110479214567 0.000249329475194252 5.04495720560649e-05 0 0 0 0.000616902234423205 0.000352086166503338 0.00138297553777345 1.03485002178646e-65 6.25192515819999e-06 0 NM_001206277.1 SIGLEC10 Bos taurus sialic acid binding Ig-like lectin 10 (SIGLEC10), mRNA. 6e-50 203 87.65 0.103670315518352 0 noncoding 0 0 0 0 -0.3066355584129 0.0812911665017225 -0.0429362102496319 0.385634562437576 GGGGTCAGGGTTGGGGGTGAGGGCTCTGGACCTGCCTGGGACAGGGCTCAGGGTTTCAAAGCAAGCTGGAAGATCTGTGCCTAAGTGGCTCTGCATTTAACTTGATCAACACTGGTTTATTCCCAGGGGCCTCAGTGTCTCATAAGAAGACTTTTTGTTCTTGTTGCTGCTGATGGCCTGCTGATGACAGCATTAAGGAATCCAGGGAGGAGACCTTCGGTAATAAAGTGACACTTAAAGTGCTTTCAGGTGATTTCTCTGAGCAGTTGTGGGGCTAGGAATTAATCTTTAAAATGCAGGTACGTGGCTTTGAGCATGTGTCAAGAGGGAACCTGCAGAACACTTTGGCATGAGGTTTAGCTAAGTTGATGCTGCACTTGCCAGGTGTGGTAACTGGACCGAGGAAGGGGTAGATGAATAAAACGTGGTTCCCTGGTTTCAGCAGCTCACAGTGATCTGGGGGAGACAGAAATGTGAGCAGCTCACATTCTGGAAGCTAAAAATCCAAGATCAAGGTTCCAGCAAATTCAGTTCTGGTGCCAGCTGTCGTCTTGTGGTGTCCTCATAAAGCAGAGAGAAGGAGCTCTGGAGTCTTCTTATAAGATGGAAAAGATGCGAAGGAGATTATTTTCCAGATGCGAAGGAGATTATTTCAATACAAAACCACAGTGACCGCCTCATTTGTTCCAGCAGAAGTGCGAAACTCCTCAGACTGCTTTTTGTGATCTGGACTTGACCTACACTCCAAACCTTGTCTTTAACAACCTTTTGCCAATATGCAGCCAATTCCATAACCTGAGTCCTTGCTGCAAGGCTGGCACGTCTGCAGTTTCATGAATAAGGCTTTCTCAAGAAGGCTGCCTCCATCCTTGCCCACCCTCCTGGAGAATTTTAAATTATCTGTAAATTCTAAGTTCGCTTATCTCCTTGTCTCTGATGTGTCTCTCCTGATCAAATTCAGGCATTGTCTTTTTAAAAATAATTCTCTATCACTCCTCTATTTAAAATTTATTTTTTCAGTAAACACTCACTGAGTTCCCATCAAATGCTGAGCAATCTGTTCAATGCAGCTGTTACAATGAGTTTTTCGTTATATGTCTAGCTAGTAAAGTTATGAGGTCTGGGGTACTGGCTCTCTTAATCTTGCATGCCTTGTATCCAGCTTAGTTCCTTGTATGTAGTAGGTGCTCAATTTATGCTGTTTGTATAAATCAAAATAATATGATAGGATTTTCAAAATACACAATCGGGACAGATGGTCTGGTAAAGTATGTTTTTCTTATTAGTAGGTGTATTTATATAGATTCCTCTTAAAATTTTATTTTTTTCTGTTGGTCATGTTGAAAAAAACACAAAGACATAGAACAGGACATGTCTCCCCAGTTGGTTGCTGTTTAGTTGCTCAGTCCTCTCCGACTATTTGCGACCCCATGGACTGCAGCACTCCAGGCTTCCTTGTCCTTCCCTGTCTCCTGGAGCTTGCTCAAACTCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTTGTCCTCTGTCGCCCCCTTCTCCTCCT TCONS_00051778 TCONS_00051779 s 3' 63303 TCONS_00051778 TCONS_00051779 s 3' 63303 EMBV3_16887 AAGAATTTTGGCAGATCACCCCCTCAGCAGGGTCTGCGCATCGCCGCCGGGATGAAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10434 GCCTACTGTGTGACTTGTAACAGAATTTGCCCAGAGCCCACCTCCTCTGAACAGTATCTC Gene GeneID:327681|FST:NM_175801:58_cdna Constitutive 0 NULL GeneID:327681 20 GENE FST NULL follistatin EMBV3_01269 TCTGCCGCCGCCTAAATTCCATCCCTCTCCCAGGAAGTCCTTCAATCCACGCTTTAGCTA Gene GeneID:100297241|LOC100297241:XM_002695165:782_cdna Constitutive 0 NULL GeneID:100297241 18 GENE LOC100297241 NULL hypothetical protein LOC100297241 EMBV3_36459 GGTCACAGAGTCGGACACAACTGAAGGAACTTAGCACACATGAACCTCCCCATTATAGGC Gene BVT0102_105957 - 1 EMBV3_30446 GK000005.2:36387633-36425015 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11724 TGGGAGGCTTGGAGTGTATAACCCCAGTTTTTTAGAGATGGTGGGATTGGGAGTCAGTGG Gene GeneID:521837|MPZL3:NM_001098051:92_cdna Constitutive 2 NULL GeneID:521837 15 GENE MPZL3 MGC139235 myelin protein zero-like 3 EMBV3_21594 GCCAGCCATATAATCAAATTTATTTCACTAGGGGGATGTGTTTTTACTTTAGAAGAAATG Gene GeneID:514473|ATRX:XM_002699982:65_cdna Constitutive 4 NULL GeneID:514473 X GENE ATRX NULL alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) EMBV3_11883 CGACTGGCAGAACTGCTCCCTCAAGTTCAGAGAACGGGGAATGGGAGATAGTGCACCGGC Variant GeneID:281687|CHRND:NM_174271:31_cdna 507^616 2 EMBV3_02691 GeneID:281687 2 GENE CHRND NULL cholinergic receptor, nicotinic, delta EMBV3_38937 GCATATGTGTTGACTGGATGGGGAAACATGGGAGGAGATGGAGGCTGGACGTGGTAATAC Gene BVV0102_198263 - 0 NULL GK000014.2:63802408-63953902 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35946 AGGGGCTGCAAGCATTGGAAAGGGACTTGGAGGAATGTTGTTCTCAAGATTTGGACGTTC Gene GeneID:338047|DDHD1:NM_176643:21_cdna UTR3_Alt 3 NULL GeneID:338047 10 GENE DDHD1 NULL DDHD domain containing 1 EMBV3_35782 CCTGGGGCAGGTTGTGACCAGCCAGGAAGCATAGGATGGCACTTCTTTTGTAAACTCCTT Gene GeneID:534413|EFNB1:NM_001080299:65_cdna Constitutive 0 NULL GeneID:534413 X GENE EFNB1 NULL ephrin-B1 EMBV3_29662 GGACTTCGTGACCGAGGCGCTTCAGAGCAGGAGCACGGCTTGGACTTCCAGAGACTTATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27424 CTGGACCAGCAGGAGCAGTCGAGAGTTGTGAAATCTGTCAAGAGCAATTTGAACAGTACT Gene GeneID:510604|PCF11:XM_002699067:88_cdna UTR3_Alt 2 NULL GeneID:510604 29 GENE PCF11 NULL PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) EMBV3_14314 TGGTTTTATATCCCACATACCTCACATAAATAGGCATCATAGCCCTCACACCCTGGGCAG Gene GeneID:281195|GLCE:NM_174070:20_cdna UTR3_Alt 2 NULL GeneID:281195 10 GENE GLCE KIAA0836 glucuronic acid epimerase EMBV3_04744 GAGATAGGTATCCTGGTGGAGAAAGCTCAGAAGCTGCAGCAAGAGCTGGAGTTCCTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04939 TGTTCACCACCACACCTGAGAAGGGCTGAGAGAAGACCAATACTAAGGCTGCCGTCATGA Gene BVT0102_232568 + 0 NULL GK000004.2:106322133-106332947 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185230 1 XLOC_111524 Coding TCONS_00185230 XLOC_111524 Coding Coding PRSS58 4:106329397-106339084 = TSS137745 4665 1 TCONS_00185230_1 244 0.101822079314041 5 0.518893247986785 7.9170435843846e-05 4.87729796845151e-05 1.09562241351952e-09 7.37236905385902e-12 1.43080106642423e-05 2.60296729457357e-45 5.43079987165246e-05 3.87088630877611e-05 5.60104801881793e-05 2.28239621386867e-06 0 0 3.57721710847885e-11 5.98620594969146e-11 9.4446897621308e-10 0 0 0 1.6773887802047e-09 6.13136108984116e-05 3.36126032901967e-11 0 0 0 4.76620287564561e-05 4.0254747450232e-05 3.88780155141713e-65 0 0 0 NM_001040509.2 PRSS58 Bos taurus protease, serine, 58 (PRSS58), mRNA. 0.0 2006 99.91 0.238799571275456 NM_001001317.3 PRSS58 Homo sapiens protease, serine, 58 (PRSS58), mRNA. 0.0 648 79.55 0.159699892818864 TCONS_00185230_1 sp|Q32LI2|PRS58_BOVIN PRS58_BOVIN Probable inactive serine protease 58; 4e-179 496 100.00 0.987704918032787 1 coding 0 0 0 0 0.0171745986197642 0.892361880923724 -0.00395380803712345 0.932634884758306 ACACAGCAGGGAGCACTGTGAATTTCAGCATCTCTCAAATTAGGTGCATCTTTCCCTGAAAAGGGGGAGAGAAATGCTGGATTCCAGATCTGTTCTCCACTGTGTTGAAGACCAAGTCATCTGGTCTTTGTTGAGGGACCTCTAATATCTGGCACCACATCCTACTCTTTTGGAACTCAATCCTGCAATTGAAAGAATTCAGAGGACAGTTGTTCCAAGTCTAGAACCGCTTCCAGCTTCATCTTAGTGTTCTTCTCTCCTTCCTTGGCATCCTTTTCAAGGCACTGAACCTCATCTTTTGAAAAGGCTTTCAACATGATTATGAATTTAATCCTTCTGTGGGCTCTCTTGAACCTGCCTGTTGCTTTGACCTTTGATCCAAACTACAAAGACGACATCACTCCCCCCTACCTGATCTACTTGAAGTCTGATTACTTGCCTTGTGTTGGAGTCCTGATCCACCCTCTTTGGGTGATCACAGCTGCAAACTGTAACTTACCGAGGCTTCAGTTAATACTGGGAGTTACAAAACCATCCAATATAGATGAAGAAAAATATGTACAAGTGGTTGGTTATGAGAAGATGATTCATCACCCACAATTTTCCATCACTTCTATTGAGCACAACCTCATGTTAATCAAGCTGCAAACCCATATTGAACTCAACAACTACGTGAAAATAGTCAGCCTGCCCAAAGAGCCTGCCGCTGAAGATGACACGTGCATCGTCTCCACCTGGGCCTACAACCTGTGTGACCACTACAAGGACCCTGACTCACTGCAGAATGTGAATATATCTGTAATCTCCAAAGTTGAGTGCCTCAAAGCCTATAAATACATGCACATCAGAGACAGTATGATGTGCGTGGGCATTGTGCCAGGACGGAGGCAGCCCTGCAAGGAAGTCACAGCTGCCCCAGCGGTGTGCAATGGCATACTTCAAGGAATCCTGACGTTTGCGGATGGGTGTGTTTTGAGAGCCGATGTGGGCATCTATACCAGGATCATTAACTACATACCCTGGATTGAAAATACCATCCAGAACAACTGAGTTCTCATGGCAGGAATTCTAGACCTTGTGACAACACCCATTCCTAAATCCAGCCTCAGAATTAACCAGGTGTCCTGAATTGCATCCCACACGTCTGTCTCACTCCTGCCCCACAGGGTGGGTGGCTGGTACCTCCCTGTATGTGACTATGCATGGCAGCACTTCCTCCTCCCCTACTGACGATGATGGTAAACTCCACACCTCTTGGAATTTATGAAGTGGCGACTGTGTTCTCGCTAATGAACTGATCATTGCCTTACTGGGGAAAAAAATTTAAAAAGGTTACTTGATTGCCATTTTGGGTAACAAAACACCTACTACTTGCACTGATTCAATCACATGTGCTTTGGGCAAGTTATACATGCCAGCTGGAAGTCTGAGAAGGATTAAACTAAATAGAATTCCCAGGAAGGAAAGAGGGTTTAAGGGGGGACATGTGTTACCCACACAACTCTCAGCACCAGACATGGATTCTGGACATTCATTTTGCAGCATTCTCAGTAGGGACTTAGCTCTGAGAGGTTAATACCAAAGGTAACTGGGGTTTAGGACACAGCAGATGAACAGAGAACACAGGATGGATTTTCCCAGTGTACTCTTTCTATGATGCCAGCTGCCCCAGGAGCTTCATTCTCCCCCGGTTAAACACTCTTGCCTTTTTCTTCCTTCCTTCTTCTCTTTTCATCTCACTTCTGCAGCTCCAGTTACCACCTGAGAGCTTTACTTGATCGATTTCCATGGGGAGTGGCCTTTGACCCGTATTATGTTAAGAGTGAGATGGGTCAGTGACATTTTTGCAAATTAGGTCTTTGCAAGAAGTCTCTGCACATGCTCCATTTGGTTCCATTGCTCACTTTGCTTGTGGAGCCATTTAAAAACAATGAGAACAATGAAGAAGGACTTTAGAACAGGTCAGCTTGTCTATCTGCTCATTCAAGTCTTCTGCAGTGAGAGTATTTTGGTGAGAATTCTCAGGGATACCATATTTTCCTCCTCCAAACTGACCTTGAAAAACTGTAGTACATTAATTCTTCCTCAAATAGCTTATCCCCATGTCCCCATTCTGCTCCTTCCAAGTGTCTACCAGGGCAGAGCATCAGCCACTGTCAAGAAATTCACATTAATCTTGATCTCAGGAATGAGAACTAGATAATGTTGATTGATCTTCTGGCTCCTGAGAAGAATTCAATTCTACTTCTTCCTTCATGGCATCTCTCCGAGGAGTTTTAATATCACAAGAGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGATGGGCTGCAGTCCATGGGGTCACAAAGAGTCAGACATGACTGAAGCAACCTAGCCTGCCTAAGTCACCAAGTAAATAGGGGCTCTTCTTTTATAGGCTTAAAAGAAGACTCAGTCTTAGCACAGGATCCGTTCTCTAGGGCAGTGGTTCCCAACCTTTTTGGCACCAGGGACTGGTTTCACGAAAGACAATTTTTCCACAGACCAGGGCCCAGGGATGGTTGGGGGATGATTCAAGGGCATTACATTCACTGTGCACTTTGTTTCTGTTATTATTATTACATCAGTTCCACCTCAGATCATCGGCTGGAGATCTGGAGATTGGGGACCCCTGCTCTAGGGCACCCAGGCTCTCTTTGGCTCAAAGGGAATTAAATCAGTTAATATAACTAACAAGTTTGCAAGTGAAGAAGGAGGCTGGAATACTTCAGCTTATTGACTCACATCACTCCACTGCTATCAAATCTGTTGGGGTTGTTTTGGCTTACTTTTGGTTCTATCAGTCAAATAGCTTGACCTGACTGTCAGCTTCTCTCCTGGGATCCCATTTTAATGGAGAGTCCTTGAAAGAATCCTCTTAAAGGCTCAAAACATTACCGTGTTGTGTCATTCATTTCCATTTTAGGAGTTGGAGAAGCAGGTGAAATGAGTAACTTGACATTGTCTATTTTCCTTTAGCAAGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCATTTAGCAAGCTATTACACTTTAAAATGCAAAAAAGTTCTTTAGTAGGAGCTAAATGATACGAGGAGAAAATGTGACCCCTGCAAAGTTCTTCTTCAAGCCTTCTCTGTTCATTTGCATGTTGGATTTTTAAGAGAAAATAGGATGGCATCTATGACTCAGTATCCCGAAGGGTGGGATAAGTCTTTCTAATTGTAAGTCACAGCCTTAGGAAGCCTGCTGTTGTCACGTGTCTGAGCCATATTCTCTATCAGCTCTGTAAGTCACGTTGCTAGAAATTTCCCTCTTCATCTGCCTCCTCCTTTATCTCTCTCACTTTGTTCAGAATTTCTGTAAAGAAAATAGGGGTGTCACTTATTAGCCTCCTCAGATCCTAATAAGACATTAGGATCTGAAGATCATGCTGATTAGTAAGGGGATACTTCCTATAAACACCATTGTCCAGGCTGAAAAGCTATGATCCCCAAAGCTGTGACTGGATGGGCCAGGATCATACAAAAGCCAGGTGAAGATCAGGCTAGAGCTTGAGCCTGTGCACAGAAATAAACAGCAGCTACTGCAATGATGAGGCTTTCAAAGACTTCATAGAATTTAGAGTTTCTTTCCTCTGTGTATTTCCTTCAAGGATGGGAGGGTTTGAGAAACCGTAAAATGAGTTCTGCTCAGTAGGAAACCAGGGTGGGAAAAAAGCCCTGGTTTAAAGTCATCAGCTATGACAACTGGAATAGAATAAAATTGCCTACTGGGGGCTTCCCTGGAGATCCAGTGGTTAAGATTCCATGCTTCCAATGCAAGGGGTATGGGTTTGATCCCTTATCAGGGAAGTGTCTACATGCCATCACAGTGTGACCAAAAGAAAACAAAGCTGTGGTTCTTGATGAAACTGAACAAGACAATAATAAAAATTTTAAATTAAAAAAAAAATCATCCACTGGAAGCTAAAGATGGGGAGCCAGGGATTGAGGAATCCCAAGGCCATCACTCCAGACCCTTTGAAAACTCACTGCAGTACTAGGCACCTTGATTATCTCACTTTGGGATTTCTGGCAACTGCTCTGACCAAAATTCAACCAAAATGCCAAAGAGAGAGGACTCGGGTATCCAAATGCCAGGCTGTCGGTCTCCTCCTCCTCGTCGTCCTTGTCTTCTGGAGCCAGGCAGGTGTTCACCACCACACCTGAGAAGGGCTGAGAGAAGACCAATACTAAGGCTGCCGTCATGACCTCTGTGCGGGTCATGGAGATCCGCGGGCAGATGGCGCCCCCTGGTGGAGAAAGTTTCTCACTCCCCATAAGCGCCGAGGAAAGAGCAGGTAGGTGCTGGTAGTATTGCCTGGCAAACCACCCACCCACTGTGCCATCAGAGATGGGGCTGCCTTTGAAATGCCTCCGCATTCACTCACGCCCACCCTGCACCCCAGTCACCTGCTGTGTGGACCACACTGTCTGGGATGGAGAAGCTCTGAGCTGGAAGCGGGGTGGGTCAACGGCAGTCCAGTCTCCCTTCTCTGCAGGGGTCTCAGGACCGGCGTCTTTCTCATAACACCCCTCCCTGTGGTTCCCGGCCATTCATCTGGGGCTGAGCCTGCTGTTCTGCCCT EMBV3_40231 ACCACTGCAGTGTAAGGAGCCTGTCGGCAGAAAGTCCCATTGCTGTTTTTGTCCCTGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11360 GCCAAGATGCTACGGAATCTTCTGGCTCTCCGTCAGATTGCTAAGAGGACCATAAGTACT Gene GeneID:327688|COX7A2:NM_175807:5_cdna Constitutive 1 NULL GeneID:327688 9 GENE COX7A2 MGC127784 cytochrome c oxidase subunit VIIa polypeptide 2 (liver) EMBV3_23614 GCTTTCCAGAGAGTATAGCAAATGCATCAGCCCTGAGGTAGGGGAGAAAGCTGGGTGTAT Gene BVV0102_086379 + 0 NULL GK000022.2:13380346-13679509 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36976 GAACCCCTTCATTCACTGTATCTCGTGAGGAATTGGGGGAGGGTTTGGGCAACAGTTCGT Gene BVT0102_109423 + 0 NULL GK000006.2:45818039-45927553 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06970 GATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCGTGTTCTAGTCTGTTGCGC Gene GeneID:616981|FERMT2:NM_001101264:137_cdna UTR3_Alt 3 NULL GeneID:616981 10 GENE FERMT2 NULL fermitin family homolog 2 (Drosophila) EMBV3_42547 ACTGCTGCTGGCTCTGCTCTGCCACCAGCCTGTGTCTCCCTTTATATGCTATTTGTAAAC Gene GeneID:505868|PDXDC1:NM_001101859:326_cdna Constitutive 2 NULL GeneID:505868 25 GENE PDXDC1 MGC179380 pyridoxal-dependent decarboxylase domain containing 1 EMBV3_16985 CTGCTGACTGCCCGCAGCTTCGGCGACAAGAGTACTCGGGTGGAGTTTGACCTGCCAGAA Variant GeneID:517400|SNX30:XM_002689930:73_cdna 157^348 1 EMBV3_17501 GeneID:517400 8 GENE SNX30 NULL sorting nexin family member 30 EMBV3_07255 TACTTGCTCTCTTCCTGCCCTCCTTCCACGTGTACATAGACTCACTCTAGGAGGAAGACA Gene GeneID:528390|NR4A1:NM_001075911:27_cdna Constitutive 0 NULL GeneID:528390 5 GENE NR4A1 NULL nuclear receptor subfamily 4, group A, member 1 EMBV3_39938 CTGCAGTGAAGAGCCTGCGTGCCACCATGAGGGCCCAGTGCAGATAAAAAAGTGATTTTC Gene BVV0102_094871 + 0 NULL GK000003.2:29843501-29849954 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03774 TGACATCAGGAGCTTGACATCTTCTCAATGCTTAGGCTTTTCTGAGGGGATTGGTGGTGA Gene GeneID:540069|CIAO1:NM_001037482:92_cdna UTR3_Alt 2 NULL GeneID:540069 11 GENE CIAO1 MGC127264 WDR39 cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae) EMBV3_07568 TAGTTGTGTACTTCCTAAGACTTGAGAGCACTCAATTTCAGCTCTTTCTAGGGATCTAGC Gene BVT0102_133503 + 0 NULL GK000006.2:23566603-23748100 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39389 TGACTGAGGCTGCCAAAAATGAGCACAGAGGTGGGCACTTGGATTATGAGATTTATGATG Gene BVT0102_220185 + 0 NULL GK000016.2:77988158-78008530 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070324 TCONS_00070326 TCONS_00070321 TCONS_00070322 TCONS_00070320 TCONS_00070325 TCONS_00070323 TCONS_00070319 1 XLOC_042187 Coding TCONS_00070319 XLOC_042187 Coding Coding ZBTB41 16:78002996-78011433 j TSS52229 6335 1 TCONS_00070319_1 125 0.0958168902920284 2 0.249288762446657 8.93574851500076e-06 3.61216553102687e-09 8.8258322227504e-11 9.51312692237641e-10 2.41512603433163e-08 4.81372005465394e-22 5.24353637959095e-05 2.68870035748424e-05 2.59718611896622e-09 0.000308823801512124 2.60618070628886e-12 5.34612753180387e-25 8.979652724922e-16 3.85230026851257e-05 4.68964785655135e-06 0.00102907731523354 5.12196311387294e-60 0.000169672818141955 1.29810889401799e-05 0.00014748321439362 0.000116460414613717 0.000227817745311069 0.000229679801452108 0.000222191618914049 3.8237203359099e-05 2.7062793110431e-238 6.54772098055117e-05 8.69268746433841e-06 4.61329550407856e-05 3.7743960815742e-05 XM_003583275.2 ZBTB41 PREDICTED: Bos taurus zinc finger and BTB domain containing 41 (ZBTB41), mRNA. 0.0 1.116e+04 100.00 0.976479873717443 NM_194314.2 ZBTB41 Homo sapiens zinc finger and BTB domain containing 41 (ZBTB41), 0.0 4904 77.34 0.976164167324388 TCONS_00070319_1 sp|Q5SVQ8|ZBT41_HUMAN ZBT41_HUMAN Zinc finger and BTB domain-containing protein 41; 4e-71 231 90.40 0.992 0 coding 0 0 0 0 -0.0825520749848817 0.435433468045342 -0.0181622447157022 0.761802798529517 CTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACCTAGCAGCAGCCTAGCAGATAGTAAACATTAAAGGTTTTGTGGCCCCAGCAGTCCAGACCACAAGCACTCAACTCTCTGTGGTAACATGAAAGCAGCCATAGACAAGGTGAAAAACCATACAAGTGTCAAATTTGCAATCAATCTTTTAGAATTAAGAAAACTTTAACAAAACACCTGGTCATTCATTCTGATGCCCGGCCTTTCAACTGTCAGCACTGTAATGCGACATTTAAACGGAAGGACAAGCTGAAATACCACATTGACCACGTTCACGGCATAAAGTCTCCCGATGACCCTCTCAGTGCTTCTGAGGAAAAACTCGTGTCCTTGCCGGTAGAGTACTCATCTGACGATAAAATCTTTCAAACAGAAACAAAACAATACATGGAGCAGCCCAAAGTCTACCAGTCGGAAGCCAAGACCATGCTACAGAACGTGTCTGCCGAAGTGTGTGTCCCCGTGACGCTGGTCCCGGTGCAGATGCCTGACACGCAGGGTGACCTGGTGCGCCACACCACCACCCTCCCGCCCCCCGCTCACGAGATCTTGTCGCCACAGCCGCCGGCCACGGATTACCCTCGAGCCGCTGACCTAGCTTTTCTGGAGAAATACACACTTACTCCTCAGCCTGCAAATATAGTTCACCCAGTCCGACCCGAACAGATGCTCGATCCTAGAGAACAGTCTTACCTTGGAACGTTATTGGGCCTTGATAACTCCACTGCTGTACAAAACATATCTAATAGTGAGCATCATTCATGAGCAAATCTAAACATTCCACAGACTTCTTCAGTGGCTATGCACAATGGTAGCCTAGCGCTGACGGCTTTTAAATTAGTGGGGCTGCTATTTTTTCATTTTCTGTATAGTTTCTCAAGTCCTCAGATGCTTTTCCAATCAAAAAAATATGTATCTCTGTTTACTGAACATATTTGAATATTTGGACCCATTTTGAGGTATATAATATTTGAAATAGACATTTTGTGATTTTTTTTTTAAAAGATTATTTAGTGCTAATTTTTAACTCTCTTAACTTTTCAAAACTATCAGCTGTTGACATTATGGGGGTATTTGTTTTTAAACATCGGTGGAAGTTTTTATTCTCCTTTAGTCTCATTCCTCTTTTCTCCTTTCCCCATCTTCCAAACAAGTGTTAAGGAACATGTACCCTTTAAGAAAGAATGTCAGAGTGTACTGATAATTGCAACTGTTCCTTATCCTGACTTAAGTTTCATGATTATTTCTTCCAGATTTAAAAAAAAATGAAATTAGGAATTTGAATTTATAAGAAAGTCTTGGGATCGATCTGTGTTGTTTTTCCATCTGGCCGTAATTTCAGTGTATCACTCTTCTTTGGTCTTTTGACAGACTCAAGACCAGAAAGCTGACTAATGTAGGATTAGCTTGTTAAATGAAATGTAGAACTGAAATAATTATCCAAATGATTGGTTTTTGCCTGTGCTTCAATTATTATGAATAAGAAATGGAAATACAGATGTAGGCATTAAATTATACAAGTTGAAAATGTGTTAAAAGCAAAATATGGCAGTTTTAACTAGATATTTTTTAAGGTAAATTAACTGTTTGTATTTTGTCATTTATTTCAGAAACATTAACAGTATATCAGCATATATCATCATCTAACTAATTAAAATTCAGTTAACAAGCCACTTTTGGTCTCATTTACCTTGGCCAGCTGTAACTCTGGGAAATAGAACCTAGAGATTTGTGTTTAATTATTAGAACAGGGGCCAACAAATTATAAAATTCATGTCTAACTGAACTAAATGTTCATTTACTTTAATTAGAGCAAACCATTCCTTGTATACAGATACACATGTAACCTAGATCTTTATTTTTACTTTACACATAACCCTAATGTCTGTGATTATCCTTAATTTTTATGTTTGTATGATACAAAAGTTGAGGACTTGGTAAAAGGAAATAGCAGTTGGAGCAAAACCTCACTGATTAAAATTAAATGAGGAAAACAAAAAGTCAGCCAAAATTGTGAAATACCTTAAAGATGTGCACTTTCCATACTCTGAAGTCAATTTAAACTTAAACTAGGATGTTTCCTAGTGGAGCTGCTCGAAGGATTAGAGACTAGGCAGGGTTGATTTATTATTAGCATGTCCTTATGTAAACTACTGGAAAATAGCAATTTTAAGAGTTTTCTATTTCAGTTTTGTTTACACTCCTAATTGCTTTAAGCACTTTTTTTGTGTAAACTGTAAAGTCTGGCCCAGCCCTTGTGAAAAAGAAAAATCACAAATAAAATAATGAAGTTTAGCAAAAAATTTTAACCACTTAATAATGTGGAAACATGTTTGCTGAAGCACTTAAGAAATGAAGGTACTTTGCAGGAATATTTACCACACTAGTGGGGAAAAAAAAAAAAAGTTGAGAATTGGGGCAGTTAACCAAAGTAGCTCATATAACTAGTAAAGCCAACCTGAGTTTTGCCTCATTTGTTGAAGTTTGGTTATAATTCTCCTATAACTGATAGATACAAGCAATGTATCAATATTCTTTTTAAAGCATTCTTACTTTTGTGTGGAAATGTTGTGTCTGGGGTACTTAACATGATAGAACTTGACTATATAAGGTACTATTTGTCTTTCAAACTGACTTTTAAAAACATCTCTTTATGATTTTTATCATAAAGACTTTTAACTAAAAGACTTACTATGATGAAAAGAAATCACTTTTAAAAATGTACCCTGCCTTGAATATAAAACAATGTAGAAAAGTCTGGACTTAGACAAAGGCAAATAGTATATATGTATATGTGTGTGGTATATTATATGTTTGGTAGCAGAAAAAGAGGGTGTTGCATTTTCACATTCAAAAGAATACTTTGCTTTTTGAAGGTATTGACTTTAGGGTTCTTTTAATAATAATCTCCTAATGCTTTAAATATATAATTTGATTGTAGGAATTGGTTTACAGTATAGAACTTTTCTTGAATACATCTCTTATATAAAGTGAAACATAATTATATTTACTTATTATTGTAGATAACTTAAACTTGAAAAGTAGTTTACTGTTTTATAAAATGCTTTGACGGTTAACTCATTTAAACCTCATAGCCAGCTCTGAAGTAGAAATGGCATGCTGTATTCCCATGTTAGAGATGAAGAGTCTGAGGTTAAGCCTACATCGTTAGTAAGTGGCAGAGCTACTAATAGGGGAAGAAATAGAGCATTAATGAATGCTTTCCAGGTGCCAGGCACTGCATTTTCTCATGTAATCTTAAAAATAGTATGGGAGGTAGGTAGTATAATTCTTATGAAGAAATAGTCTCAGCGGGCAAACAAATCTTCTGCCTCTAATCTCCAAATTAGAATATAAGAAGTCTTAAAATTGTGAAAACCTCATGGATTTGGGCAAACTGAATGTATATATAAGTTTTTGAAGTTGGCACAAAAAATATGAAATGAGGCCTGCTCTTTTCAGTTAAGTGTTTGTCACATTTGATTTCGAGTATTTGGGGCAAATGCTCCATTAACTCTAAAATCCATGAATTCTGTAACTATAGTTAAAATTTTGAATCTTGCAACTAAGGTCAGCCTCATTCAGAATTTTTTATTTTATGAGCATAATTTATTGTTTTAAATTAATTTTGTAGCTGATAGCTGTTAGCACTTATTATGTAAATTGAATAATTTATCAAATGTAGAAATTTGTTAACCTAATCCATTTTTACGTAAATACGCCAAAGATTTTTAGTAGGTTTTAAAATAGTTTAAAAGAATTTAAATTCTTTGTTGTTTGAATAAATATTTGTCCAAAGAAGCACAGTTGAAGTCCTAGGATTATGGATTTTCTAAAAAAAAATCATTAGTTTGAATACTAAGAATAAGTGTTTGTGTTTATATGTATTAGAAATAAGAACAGAAGAAAATACTCCGGGAGTAGTCATACTGACAAGCCAATTACAAGTAAGAATACTCTGTTTTCCTCAGTTTAATTAATTGAATGTTATCTTTTAAGTGGACACTATTAATTGCTAAATAATAATAAGCTGATTTTTTACACTACACTATTAAAATAATTTTGCCTTAGAATTTTTTTAGGACAAACTGAAGATTTTTTTGTAACAAACCCCACCTATTTTTTTGCAGCCTAAAATACCATTTAAGATTAGGGTTTGTTCTTCATGCCAGCAAGATTTCACTAGCTATGAAGGTGGTGATCTTTGCATACTTTTAAGTAACTTAGTCATTTATTGAAGAAGAGTAGCAAAAATAGGGTTTTAAACTGGTGCTTTATTAAGTGACTTCCTTTAAAGTGATGGTACATCATGAAGTAGGTACACTAATACTTTTCTGTCAACCTTAAAATTGTCAAAACATCTTGGCAGAGTGAGTGACTATAAGCTATTAGTTAAGGGCTAGTAGGTATTCAAAAATCATTCATTGCTTTCACTCTGTCATTAACAAATGAATTAAAAACACCGTTAACTGGTGTGTGTGCATGTAAGTTTGCGTTCTCTTCTCACAGGTCATTCTGCTGTATCATGGGTGGGAAGTCAGATGTGGAGCATCAGCTCTGCGACAGTGTGCTTTTGACCATGCCCAGTCATCTCTGGATTGAATGCTTTGTGCCTTTTCAGATTGAGGCAGCAGTTTGTAGTAGCTTAGAGTTGACTCTGCTGGCTAGGTTGTGCTGGTTAATAAATGATTGTGGTTGTTTTGTTATTGTTATGGGTCTTATGTTTGTGTTGCCTGCTGGTCAGGCAACAGTCTTTTTTTTTTTTTTAGGTTGCTTTATATTTTTGTAGGGAAACTGGCATCAAGTACTAGTATGAATTTTTTTTTTAATCTTTACTATTGTGGCCTTTCTAGTTACTGCAAAGCCACTCCTGGGCCTGTCTCTAGATACTCACTAGAGGAATCTGACAAATAAAATGAGCAGTGTGTCTGCCTCTCCATCTCCTCCCATCTCCCACCTTTTCTTCTGAATAATCCGTTACCAAACCACCCTGCTCTAAAAAGCAGCTTCTTCGCTCAGTTTGCCTAAAACTGAGCCAAAGGTGATGGTTTGAGATGAGTCTCTAAAAAGCAACATCCCAACCAACTGACAACTTGAGTTGATGAACTCAGGAAAAATTAGGACTTTTGAAGTCGTATTTGGATCATTCTAAGATTCAGTGCCAAATTTTAAATGACTCAAAATGTATTTTTTAATAAGAGTCAAGTCACATTTCTAAAACCTGTAATAGTGTTATGGTAAATGTCACTTACTATTAGGCTGAATAATGGATAATGTGACAATAATTTTGTAGTAATTTCTAGGAACCACAGACAGTTCTTTTTAGGTCCTCCCCTTTTGCACATTCCTCTCTAAAGTCTGTAGTGGTTTTTGGGGAGGGGGGACTATTCCCTGTTTCTTCAAAAATTGTTTCTACTTCAAGGTACTTTTATTCTGGACTAGTGGCATACTTTCTGCGCTTCCTCTTTGGCAGTGGCCTTAAGAAGGCAGAAGTAGCAGCAGTAGGTCATGTGAAGAATGAGGGGAAGGGCTGGTGGAGAGAGTATCTTTCCTGTATTTACTCTTCATCTTTCAATTTGCTGTGCACTCATCTTGAGTCTGTGACTGTTGAAAAATCCCTAAATAGTTTAAATTGAGCCTCTATAGCTATTCGTATAAAGAGAAAATAAGAATTATATTCAGAGAATAGAGGTTATACAAAATGGATATGTCTTTTTATTCTGCTTTCCCCCCCTAACTTCTTAGATAAAGAAGTAATTTTGGTGCTCATATTACTGCTAGAGATTCTAAAACATTTCTTGAATGAAGAGTGTGCACACTTATTGTTATTTCACCCTGTTGCTTGGTATTCCTGCTTTATGATTACACAATTTTTATTCCTTGTAACAGTCGGACTTTTCTTATCCCTGTGGATAAAACTGTATTACAGCTGATGACTGAGGCTGCCAAAAATGAGCACAGAGGTGGGCACTTGGATTATGAGATTTATGATGTACATTAAAGTGGAAATGCCTTTGAACCTGTTTTCAGACTCCAATCTTAAATTTTGTTTTTAATCATTAGAACTTTTAAAAGCAACTACAAAGAAAAATCTAAAATACCAAGATTTATAATTTTGTCAACTGTGTGTAAAGTATCTTGTGAGTTTTCTAGATATTTTGACTGTCTTGTGTTTCCTGAATATCAATGTCTTTATAGAAAAATTCAGTTCTCTGTGAAGACTAGGAAGTGTGTTGTATGCTGAACTAGTTCTTTGTCTTGTTTTGATATTTAAATAAAGTTCTTTGGTCCTAATAAAG EMBV3_42043 CAACTTAGTGAACATCCAGAAGACCCACGAGCGGATGCAGACTGAGAACAAGATCTCTCC Gene GeneID:510859|CCDC101:NM_001075472:287_cdna Constitutive 0 NULL GeneID:510859 25 GENE CCDC101 MGC134247 coiled-coil domain containing 101 EMBV3_18994 CAGTACCTTTGGACTTGAGTGACCTGGAGGCAAAATGTCCAGCTCTGTGTAGACAGGCAA Gene GeneID:531691|HECW2:XM_002685474:173_cdna Constitutive 0 NULL GeneID:531691 2 GENE HECW2 NULL HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 EMBV3_01311 AGCCAGCACCAATGAGTTCTTACTGCTCATCATCTTCCTGGCTCTGGGCGTCCTGATCTT Gene GeneID:541459|KCNC1:NM_001013605:213_cdna Constitutive 0 NULL GeneID:541459 15 GENE KCNC1 NULL potassium voltage-gated channel, Shaw-related subfamily, member 1 EMBV3_01039 GGCATCGCGGGTGTCACCTGTGCGGAGCAGGAATTTCAGAAACAGCTTACTAAAGCTAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32731 CCCTCTCTTCACCCTCCTTTTAGGTCCTTGGAGTCTCGAGGCTGAAACCACAGATCTGGA Gene GeneID:616283|LIN7B:NM_001046577:385_cdna Constitutive 4 NULL GeneID:616283 18 GENE LIN7B MGC137426 lin-7 homolog B (C. elegans) EMBV3_39499 TGGTTTGCATCTTCAACACCTGGGGGGAAATCTCAAACTCACGACAGAGGGATAATAGTG Gene BVT0101_038361 + 1 EMBV3_35856 GK000017.2:30319496-30324841 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076941 TCONS_00076938 TCONS_00076940 TCONS_00076937 TCONS_00076939 TCONS_00076942 1 XLOC_046942 Coding TCONS_00076942 XLOC_046942 Coding Coding INTU 17:30321960-30404795 = TSS57644 5776 1 TCONS_00076942_5 933 0.0195637119113573 16 0.930463336311177 0.00038313000870605 5.94816396820036e-05 0.000102005018030255 3.38208860499871e-16 1.2607825851159e-08 1.28828934672579e-12 0.000111793585871545 9.38082666874833e-17 0.000141990386744893 9.84572528833966e-05 6.04645924937202e-06 1.2746711795096e-05 3.08016334595198e-05 5.97149526174385e-15 2.03097259306521e-19 1.45441128590501e-12 5.05532222149709e-15 1.08676075477201e-13 2.9595776486632e-07 0.000405630739413994 0.000124799892939184 0.000267906313952527 9.34519031622905e-05 0.000228492916338277 0.000313436938544589 2.87632614114373e-08 0.00011137176011944 0.000182858620581394 1.48160701701992e-05 5.496438479056e-11 NM_001205855.1 INTU Bos taurus inturned planar cell polarity effector homolog (Drosophila) (INTU), mRNA. 0.0 5054 100.00 0.484937673130194 NM_015693.3 INTU Homo sapiens inturned planar cell polarity protein (INTU), mRNA. 0.0 3878 86.40 0.557652354570637 TCONS_00076942_5 sp|F1MDL2|INTU_BOVIN INTU_BOVIN Protein inturned; 0.0 1926 100.00 0.9989281886388 0 coding 1 1 1 1 -0.0208896802781706 0.902121389711525 -0.00288202735159488 0.96760858841848 GCTCGCTTCCCGAGAGGAGGCAACATGGCGGCGCCGGCAAGCAGTAGATGCGGGGTTTGAATTACTCTGCTTTTAGCAGCGGCATCCCTGCTGATGGCGTCTCTGCCGTTGTGCGGTTCGGTTCGGAGCCCAGAGGGACTCCCTGGAGACCCTTCATCACAAGAAGATCGTCAGGATTATGATCCTGAAGATCCGGTCAGCGGCTCGGGTTCATACTCCCCTACGAGTACAGACTCTAATGACCTTGAGCCTGAATGGCTGGACAGTGTGCAGAAAAATGGAGAGCTGTTTTATTTGGAGTTGAGTGAGGATGAGGAGGAAAGCCTCCTTCCTGAAACACCTACCGTGAACCATGTCAGATTTAGTGAAAACGAGATTATTATCGAAGAAGATGATTACAGAGAAGGAAAAAAGTATGAACCCAAACTCAAGCGGTTTACCAAGATTTTAAAAAGTAAAAAACTTTTACCCAAGCGCTATAATAAAAAAAATAGTAATGCCAGCGGGCCAGTATCCATTCTAAAGCATCAGTCCAATCAGAAAATGGGAGTTATTGTCCAGCAGCGGCACAAAGATGTGAATATCTACGTAAACCCCAAAAAGCTAACGGTCACCAAAGCCAAAGAGCAGCTCAAGCTTCTGGAAGTACTTGTTGGGATTATCCATCAGACCAAGTGGAGCTGGAGAAGAACTGGAAAACAGGGCGGTGGAGAGAGGCTTGTGGTCCATGGCCTGCTGCCAGGAGGATCTGCAATGAAGAGTGGTCAGGTTTTAATTGGTGATGTCCTCGTTGCTGTGAACGACGTAGAGGTGACCTCTGAGAACATAGAGAGAGTTCTGTCTTGCATTCCTGGACCTATGCAGGTGAAACTGACATTCGAAAATGCATATGCTATGAAAAAGGAAACAACTCAACCAAGACAGAAAAAGGCACAGTTGAACACAAGTGATCTAGTCAAACTTCTGTGGGGAGAAGAGGTAGAAGGTATCCAGCAGAATATTCTAAACACTCCTCACATCGTTATGTACCTCACGCTACAGCTTGACTCGGAAACATCAAAGGAAGAGCAGGAAATCCTTTATCATTATCCAGTTTCTGAGGCATCTCAGAAACTCCAGAGTGTGAGAGGGATATTTCTCACACTCTGTGACATGTTGGAAAATGTAACTGGGACACAAGTTACGAGCTCATCCCTTCTTTTAAATAGAAAACAAATTCATATAGCTTATTGGAAAGAAACTGACAAGCTGTTGTTAATTGGCCTGCCTGCCGAGGAAGTACCTCTTCCTCAGCTAAGGAATATGATAGAAGATGTTGCCCAAACCTTAAAATTTATGTATGGTTCTTTAGACAGTGCCTTTTGCCAGGTTGAGAATGTTCCTCGTTTGGATCATTTTTTCAGCTTGTTTTTTCAAAGAGCACTTCAGCCCACTAAACTGCATTCGAGTGCCAGTCCCAGCACACAGCAGTACGATGCTTCCAGTGCAGTGCTCTTAGACAATCTCCCTGGAGTTCGGTGGCTCACACTTCCCCAGGAAATTAAGTTGGAATTAGACACAGCATTGAGTGACTTGGAGGCCGCAGACTTTGCAGAACTGTCTGAGGATTACTATGACATGAGACGGCTATATACAATTTTGGGGTCTTCTCTATTTTACAAGGGGTATTTGATATGCAGTCATTTGCCTAAGGATGATCTTATTGATATTGCTGTATACTGTCGCCACTATTGCCTACTGCCTTTGGCAGCAAAACAGAGAATTGGTCAGTTGGTAATATGGAGGGAAGTATTTCCTCGACATCACCTCCAGCCTTCTGCAGACTCAAACACTGAAGTCTTTCAGGAACCCGAAGGGAGATATTTTTTGCTAATCGTTGGCTTGAGACATTACATGTTATGTGTACTATTAGAAGCTGGAGGCTGTGCATCCAGAGCCATTGGGAATCCTGGACCAGATTGTATATATGTGGATCAGGTCAAAACAACTCTTCACCAGCTGGAAGGGGTAGATTCCCGCATAAATGAACGGCTAGCTTCTTCTCCAACCCCCTGCTTGTCTTGTGCTGACTGGTTCCTCGCTGGGTCACATGAAAAATTAGATAATTTAACCACCTCACCTATCCTCAGTAGGCTGCACGGTGCTTCCAGGGTCGCAACCTCTCCAACATGCAGAAGAACTCTTTTCAGTGACTATTCCTTAAAGACACGTAAGCCCAGTCCATCCCGAAGTGGAGGGCCTGACAGTGGTCTTGAAGGTGAAGGTGTCGGTCTGAGCCCCCACACTACGGAATCTCAGGGTTCTCATGGTTCAGAAGAAACTGGGGCCTTGCTTAAGGTCACTAAAAAGAAGTCTGCTCTTCCAAATCCGTTTCATTTGGGGAACCTGAAAAAGGACCTTTCAGAAAAAGAACTGGATATATATAACACAGTAAAACTGACATCTGGTCCTGAGAACACACTTTTCCATTATGTTGCCTTAGAAACAGTGCAAGGGATCTTCATTACTCCTACCCATGAAGAGGTGGCACAGCTGAGTGGCTCGATCCACCCTCAACTGATAAAGAATTTCCATCAGTGTTGTCTCTCCATTCGTGCAGTTTTCCAGCAGACGGTGGCTAAAGAGAAAAAGAAAGCACTAAATGGTAAAGATCATTCAGGTTCAACAAATTCAGTGTCTTCTCTGAACCCTGTGAAAGAACATGGTGTATTGTTTGAATGCTCACCTGAAAACTGGACTGATCAGAGGAAAGCACCACCAGTTATGGCTTACTGGGTAGTAGGGAGACTCTTTCTTCATCCCAAACTTCAAGAACTTTATGTCTGTTTTCATGACTCAGTTACAGAAATTGCCATTGAAATGGCTTTTAAACTGTTCTTTGGATTAACCTTGTAGCTGTATTTTCTTGATGCATAGCAACACTGTGCATAGACCATCAAGCAGGGTTAGAACTGCTGAGATCTGTTCACAAAGAGATAAGGTTTAACTTATTTTCACTAATCAATACTGAGCATAAGGCTGATGAAGACTGAGATGATACGCTGCTGGATTTGATGCACTAAATCTTATTCTGAGACTTTTGAAGAAAATACTTGATCAAAATATGAAAAAGAGATTGTTAACTTATTTTCCATTTTGGTATATAACATTAATTTATTTACTGATTTGAAATAATGTGATGTGTTTTATGTAAAATTAATATAAGAATGTTTATCTTGGAAAAATACCCAATTTTTTGTGTATTTTTATCAAGACTAATATTGATATCTGGCAAAATAATCATGAAATTGGGAAGAGATGACCAGGTTCTGTTACTAATTAGTCTTGTGACCATGAGCAAGTTTTTGTACCTCTCTGAGCTCAGATTTTTCATGTACAAATGAAATGATTGCTTTGAGGTGTCTAAAGATCCTCTTCAGTAAAATGTGCAGTTTTCCCCCTCTAACCTATTGTTTGGTACCTAAATTATTTGTAATGTTGAGCACTGATTCCTTCTTAGATCAGATATGTTTCTTCTGGGTGTTTTAGTAGATACCTCACTGTGGGGGAAGAGAGGAGTGAAAATTAAACTGACTTTTTTATTTATTTGATTTTCTTTACTCATTCAGGTCAGTTCTATTTTGACTAGGATATATATTTTTAAACTATTTGTTCATATACTTTCATTGTTTTTCTCTTTTTTGAAATATGTTCAGGTATACACACATTTTATACAAGTTCACGAATTTTAGGAAAGTTGTATTAAATCTTTTTTAAAAAACCCTATCATGTTGAAAACACTGAAAAAGTTAATTAAAGAAATTCTTTGGTGACTTCCAATCAATACAAAGTTTTGCCTTACAAATCTGGATGTATTGGGTTTCCCCAAAGGGGTACAATGAACAATAATTTTTAATTATTTAATGAACAATAATTTATTTAACCATGAGTAGAGAAAGAAAGTTACTAAGATCAGAATTTTCTTTAGCTGTCAGAATTTGGCAGATTGAAAGGAAGGAAGAACATGACAATTCTTAATTGACATTTACCCAGTGGATTCTCCTGAATTCTCAGATGCCCCCATGACTTTATAGCACTGGGTTCTCTCTTCGTCAGGATTTACCTTTCGAAAGCAATTTACACCAGCACATCTAAAGCCAGTCTCTGCCTTTCCCTACCTCAAGCATGAGACCTCCAGCTTAATCAGAATTAACTGAAAAACATAGTGGATGCACCATTTTAAATATTTGGTCTTAGAAGAAACACTATTATCCCTCTGTCGTGAGTTTGAGATTTCCCCCCAGGTGTTGAAGATGCAAACCACTATACCTGTCCTATTAGTGATTTGTGGGCCTTAATTTTGGCATTCAAAACAGAGCAAGAAACTTGGTAGAAAATGGCTTGCAATATCCTCCCTTTCAGATTATAATTTTGGTCAAATGATAGACTCTTTACTACTGTCTTAAGACTGCTTGTGCACATATATAAGTATCAAAGTATTGTTTAAGAGTATTTAGTAAATGTCTTAAATTTCTTGATAATGTTCCCTCAAACACCATGAAGCTATTTTTAATATGGAGAATTATTTATAAATGCAGCCATTGATCACCTCAGATTTTCAAACAGACTGAACTTGGGACTTACCATTAGGAACTTTTTGTTTCACTTAGTGAAATTTTGATCTGTTGAACTGTTTTCCTGGTCTCAAAGAATCAGAAGACCACTATTTAATAACTGAAATAAAAAGACAGACTACTGATCTTATATAAAGCCAAGTCCTGTGAAGTACTGCAGATGTGCTCTGTAATGTGCATGTTGCAGAGACATTGTATTTTTAAGAAAGAAAACCAAACATTATCTTGGCTCTTATCTCTAAATAGATATCAAAATAAGTGTGGCAAGTACTGTAAACTTAGCTGCTCATTTTTCCATATATGTTCAGATTCACACCTGAGAGTAGATGCGACTCACTGGACAATAAGTGCCTGTCTGCAACTTTAAATAAAGAGGGACATAGAATGCTTTTGCAGGTATAGAAACATTCTTAGGTTGGATTTTATCATCCTGCAAACGTTCTTTTTCACCAAAGACTGTAATGCAAAAGACTATATTTCCAGCATTAAAAAAAAAAAAAAAAAGCAAGTGCTGTCTTACCACCATCATATATTTTTTAGTCCCATCCCCCCACAAAATTACATTTTAGATTTCAACCCCCATTTCTCCATTTCTCTTTTTTGTCTCTTTGTTTGTCATGTTAGAGAATTTCTCTTTTTGTGCCAAGGGACCTCAAGGATGATGCATACTGGCAAGTTAGTAAATTGCAGTCCCTGCTTTTTTATATTTCTGATACAAATGGGAAGAGCTATGAAACCAATTTACTAGGTTTGTCCACTTTGAACATTCTTGAAAATAACATTGTGAATAATTATTGTTGTCTGTGTGATTTCCCTCTAACTAGTGCCTGGCACACATTATGTGCTATAAAAGTGTTAGCAGCTGCTACTACTACTACTACCACTACTTATTATTCAATATCCATTGGTTGAAAACAGTGGAGTCATCTAAATCATACCCTCTACTGTACAAAATGTTGGAAAGCTAAGAAAAATTATTCAGCACTAAACACTTTTAAAATGAGGATTTATACTTCGAATATTTTAAAATACTTTAATAAATATTACTAAAACTTTATATACTGTACTGCGTGGAAATTAATTTTTTAGAGTTGTACTTCTATATCACTGAAGTTATTTTTGCACTATATTGACAGTTTTTAATAAAGATGTGCAGAGGTTTG EMBV3_36473 GGAGATTTTGAAATGGGAAGCCCTTCACGCTGCTGAGTGTCCTTGTGGTCCATCCCTGAT Gene GeneID:506250|HCCS:NM_001098886:11_cdna Constitutive 1 NULL GeneID:506250 X GENE HCCS MGC152566 holocytochrome c synthase EMBV3_32298 AAACTGTTTTCCCCCTCGGGTTTCTATAAGAACAAGGATAGAATTCGATTCCGATATCAA Variant GeneID:539376|Mynn:NM_001035424:34_cdna 68^287 4 EMBV3_14270 GeneID:539376 1 GENE Mynn MGC127144 myoneurin EMBV3_39366 AGCGCTAGGCCTGGGACAACCACAACAGAGAAGGAGATGTGACCTTGGGTTGCTTTTAAG Gene BVT0102_204357 + 0 NULL GK000006.2:23541420-23557312 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08049 TCTCTTGAAATGAGAAAGGTGTGGGAAATCCAGCTGACTCCGGGTTAGTGGTCAGTTCCC Gene BVT0102_393421 - 0 NULL GK000023.2:37608779-37887421 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38437 TGGATGGGTCAGACAGACTCATGCAGTCCCAGAGGAGACTGTGCAGCTTGACTCTCCTCT Gene GeneID:519826|DIDO1:NM_001075794:1135_cdna Constitutive 2 NULL GeneID:519826 13 GENE DIDO1 MGC137821 death inducer-obliterator 1 EMBV3_10502 ATCCAGTGCATCAGTCATATCTACTCACTCTGCATCCGCACCTTCTGCAACCCACTCTTC Gene GeneID:615310|CAV3:NM_001046558:220_cdna Constitutive 0 NULL GeneID:615310 22 GENE CAV3 MGC137366 caveolin 3 EMBV3_06904 TTAGCATCGTGGTTGCCCTTCTTCACAGTCTGATGGTGTTGCAGCTGACCTTTTGCACAG Gene GeneID:100298718|LOC100298718:XM_002688788:173_cdna Constitutive 0 NULL GeneID:100298718 7 GENE LOC100298718 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_03625 TATCTACTTGGGGAGTTTTTTGCATGCAGTAGGGAGCAGAGTCCGCTTGGGAGGCCGAGT Variant GeneID:615905|ZNF34:NM_001083520:125_cdna 335^595 1 EMBV3_26761 GeneID:615905 14 GENE ZNF34 NULL zinc finger protein 34 EMBV3_08948 AAGTACCCTCAGTGTTTACACATGTTAGAGCTGCTCCAGTACGAGCACTTCCGCAAGGAG Gene GeneID:532868|MED31:NM_001077989:138_cdna Constitutive 1 NULL GeneID:532868 19 GENE MED31 MGC148631 mediator complex subunit 31 EMBV3_32686 ATGGCTGTGTAGGGTAATGGTCTTGTTCTGTGGACTCTGGGGTGTCGTCTCAGCTCTTGT Gene GeneID:527414|LOC527414:XM_002686446:451_cdna Constitutive 0 NULL GeneID:527414 3 GENE LOC527414 NULL similar to olfactory receptor Olr858 EMBV3_28279 GATTGCATGTGACTCTGAAGCTGACGAACTTCCATGGCCCTCATTCATGACACTTGTCCC Gene GeneID:527263|FYN:NM_001077972:41_cdna Constitutive 0 NULL GeneID:527263 9 GENE FYN NULL FYN oncogene related to SRC, FGR, YES EMBV3_01220 GAAGGTGCTGGTGGTGGACCAGCTGAGCATGAGGTGCTCCTGGACGAGGACGACGACCTC Variant GeneID:282378|STXBP1:NM_174619:1_cdna 223^940 1 EMBV3_30162 GeneID:282378 11 GENE STXBP1 MGC140579 syntaxin binding protein 1 EMBV3_05152 CTGAAGAAAATCATCCCTACCTTGGAAGAGTACCAACACTATAAAGGAAGCGACTTTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07249 CAACTACGTATGTGATTGTTTACAGCCTCCCAACCACGAAAGGCACGGAAAGCTTAAGAC Gene BVV0102_077716 + 0 NULL GK000018.2:59713711-59732247 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084525 TCONS_00087283 TCONS_00084521 TCONS_00084539 TCONS_00084512 TCONS_00084522 TCONS_00084523 3 XLOC_051602 XLOC_052435 XLOC_051607 Coding TCONS_00087283 XLOC_052435 NonCoding NonCoding LOC617476 18:59423671-59715402 o TSS64837 5269 2 TCONS_00087283_6 129 0.257544126020118 2 0.981945634662188 0.00214028463682133 0.00140402184518726 0.0014336908285389 0.00129541565144123 0.00321223047184914 0.00126263516233354 0.00262167756015624 0.00289107814756458 0.00417072016894223 0.00127247707944237 0.000357779853157904 0.000194154864713404 0.000259671685671659 0.00202808090490099 0.000967696202117872 0.00107218167249144 2.54022965210855e-15 0.000924413823991401 0.00254244227012853 0.00177878171770334 0.000849279594273493 0.00138300286670128 0.000798761983324072 0.00213538121759434 0.00290149198095652 0.0027455239242588 0.00199857100207334 0.000485448524707297 0.000372000529215157 0.000240223723450644 XM_003583488.2 ZNF836 PREDICTED: Bos taurus zinc finger protein 836 (ZNF836), mRNA. 0.0 4628 83.51 0.838489276902638 XM_005259401.1 ZNF845 PREDICTED: Homo sapiens zinc finger protein 845 (ZNF845), 0.0 1240 70.04 0.554754222812678 0 noncoding 0 0 0 0 -0.638617640904921 0.29206393706112 -0.0819087131752269 0.147087739085258 TCCAGTCCCAGTAGGATCCAGGGATACCCTCAGGAGGAACGGCGTCGGTGAAAGAGGAAAGGTAAAGGGGAGAAAATGAGGCTTGATCTTCCTTGGTTTACACAGAAAGCCAATAAAGTCCGTGACACTGGACTTGCTCTCTTCATGGAGGCCACAGGCGCCCTCTCGATGGGGTGAGGATGCAGGGCGTCCCCTCCCCTGAAGACGCTAGGCGCCTTCCTGATTGAGTCTTAGAAGCCCGGGCAGTTAAGTGAACTCAGAGGGTCCCTGTGCTCCAAAGAGTCATCCTGAAAGAGAGAGAGAAAAAGAAAAAAAGAATGACACAGGGAGACCAAGCTTCAGTGAGCAAGGCCCGGAACTTTATTTTTAAAAGGAGCTTTTATACCCTCAGTTGTACATAGAGGATAATGGAAGATACAGAGTCATGCAGGATCAGCAGTCCTTGAACCTTATGGAGACCAGGCTTTCTTTCTGCAAACTTTTTGTATACAAAGGCTTTAGGTGATTTACATCATCTTCTGAGCAGGAGGCCTGTTAACATTTTTCTTCTGATAAAGGTTAGTCAACCAGAAAACCTATTTTCTCTAAAGGTGATTTTTCTGAAGTTTGGCACCACTCCCTGAAAGCACTAGATAAAGTTGCATTTCTATAGGGCAAAGGTGCAGTGGGCTATAACAAGGAAAGAATTTATTAACTCAAGGGTCTACAGTTAACATCAAGGCTACTACTTATTTTTTCTATACACAAACTATATTAATTAATATACTCCCAGGGACACAGTGGGTAAGGGATATGGAAACTTGGCAGCAAGCATTGGCTCAACAATGAAATCCTTCACCAGTTCTATTCTAATAATTTTTAACTCCCCAAAAAGCTCTATATTGTTACAATGTCTTAAGCTTTCCGTGCCTTTCGTGGTTGGGAGGCTGTAAACAATCACATACATAGTTGTAAGAGTCCGGATAAACCTGTCAGGCAAGTTAGAAAGCCATCCAAGGGGTTTGGATAGAAACACTCCTATTGTGCCCAGGAGATTTACTAACTAGAGCTCTAAGTTGATTTCTTTCAGAGAAAGGTGGTTGGGGATAGACCCCGTTAATGTCAGAGGAGTTGGTGAGAGTCATAAAATAGTAAGACAGACAGATTCTGGTTTGGGGGTAGATGCTGGAGCAGGTCCAGGAGATCCCTCGAGTCCTGATCCGCCTTTCCTGTCAGGTCTTCTTCGCATGACCTTTGTTATGGGTGGGATCTCCTGTGGTGGCTCCCGGCACTACACAACAGGCCAATCAACTGAGAGACTACTTGCTGGGCAAGGAATAGTGACTTTATCCAGAAAGCAGGAGACCAAAAAGATGGTGGACTACTGTCCCAAAGAATCATCTCTGAGGAGTTAGAATTCAGGTTTATTTTACACAAAAAGATTGCTATAGCTTCTTTTCAAATATGGACTTACTGCAGTTGCTCAGTACCTGAACTAAAGTCATCAGAGAAAACATATAGTGAAAAAGGTAAAGGATTTGCCACAACCACTGAGTCTGGGAAGTATGGCTCCACTATGTTCCTATCTTGTGACTTTTGGGTAAGATCCTTGCCACACACATTACATTGCTGTGTGTTTTCTCCAGGATAAATACTCTGATACTACTGGAGAGATGTTGAGCTGTGAGGATAGGGTTTTTTTTTTTTTTTTTTACACTTCTGAAACTGGTGAGGAATCTTTCTAGAATGAATTCATGTTCTAAGGACCTAATAAATACATATATATATGGCTTCTATGCAGTATGAATTTTCTCATGAAGCCTAAGATGTTGGCACACTCATGATATTTGTATGGTTTCTCAGGAGAATGAATTTTCTGACCAACAGTAGGGTGTGAATTTTGAAGACTTCTACCATATGCCACATTCACATACTTTTCTCTCATGTATGGATTTTCTGATGTTTAGTGAGTGCTGATACCTGAGTAAAGGATTTTCCACACTTGAAACATTTGAAAGGTTTCTCTATATGTATTCTGCAATGACTTGTAAGCTGTGAATTCAGACTGAAGAACTTGCCACACTCATCACATCTTAAAGGTCTCTCTCCAGCATGAACTCTCCAGTGAAGTCGAAGATGTGCTTTTTGACCGAAGACTTTTCCACACTCATCACATTTGTAAGGTTTCTCTCCAAAAAAACGCTCTGATGACCAGCAAGGTGTTAACTTCAGCTTAAGACTTTGTCGCATATATCACATTTAAATAATTTCTGTCCTGTATGTATTTTCTGATGTCTCCCGAGGTTTGAGCTGTCAGTAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTCTCCAGTATGAACTGTCTGAGGGACTGACTTTACACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGCTTCTCTCCAGTATGTAATCTCTTATGAGTTAAGAACTGTGAAGGTTGACTAAAATGCTTGCAATACTCATTACATTCGTGAGGTTTGTCTCAAGAATGAACACGCTGATGAACAGCAAGCTGTTCACTTCCCCTGAAGACTTTGTCACATATATCACATTTAAATAAATTCTGTCCTGTACGAATTTTCTGATGTCTCCTGAGTTGTGACTTGTCAGTAAAGGCCTTGCTACAGTCATCACATTTCTAAGGTTTCTCTCCAGTATGAACTGTCTGATGCCTTAAAAGGCTTGACTTCACACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTGTCCAGTATGAATTGTCTGATGACATAAAAGGAATGACTTTACACGAAAGACCTTGCCACACGCATCACATTTGTAAGGCTTCTCTCCAGTATGAACTGTCTGATGCCTTAAAAGGGTTGACTTTACACGAAAAGCCTTGCCACACTCATCACATTTGTAAGGTTTCTCTCCAGAATGAACACTCTGATGACCAGCAAGCTGTTTACTTCGCCTGAACACTTTGTCACATATATCACATTTAAATAACTTCTGTCCCGTATGAATTTTCTGATGTCTCCTGAGGTGTGACCTGTCAGTAAAGGCCTTGCCACACTCATCACATTTGTAAGGCTTCTCTCCAGTATGAACTGTCTGATGAATTAAAAGGATTGACTTTACACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTCTCCAGAATGAACACTCTGATGACCAGCAAGCTGTTTACTTCGCCTGAACACTTTGTCACATATATCACATTTAAATAACTTCTGTCCCGTATGAATTTTCTGATGTCTCCTGAGGTGTGACCTGTCAGTAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTCTCCAGTATGAACTGTCTGATGACTTAAAAGGATTGACTTTACACGAAAGGCCTTACCACACTCATCACATTCGTAAGGTTTCTCTCCAGAATGAACACTCTGATGACCAGCAAGTATGCTTTTCGGCTGAAGACTTTGTCACATATATCACATTTAAATAATTTCTGTCCTGTATGAATTTTCTGATGTCTCCTGAAATATGAGCTGTCAGCAAAGGCCTTGCCACACTCACCACATTTGTAAGGTTTCTCTCCAGTATGAACTCTCTGATGACTTAAAAGGATTGACTTTAAACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTCTCCAGTATGAATTGTCTGATGCCTTGCAAGGACTGACTTTGCGCAAAAGGCTTTGCCACACTCATCACATTTGTAAGGTTTCTGTCCAGTATGAATTGTCTGATGAGTTAAAAGGGCTGACTTTGCATGAAAGACCTTGCCACAGTCATCACATTTGTGAGGTTTCTGTCCAGTATCAATTGTCTGATGAGTTAAAAGTTTTGACTTTTCACGAAAGGACTTGCCACACTCATATTTGTAAAGTTTCTCTCTAATATGAATTGTCTGATGCCTTAAAAGGCTTGACTTTAAACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTCTCCAGTATGAACTGTCTGATGACTTAAAAGGAATGACTTTAAACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTCTCCAGTATGAATTGTCTGATGCCTTGAAAGGACTGACTTTGCGCAAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTGTCCAGTATGAATTGTCTGATGAGTTAAAAGGGCTGACTTTGCATGAAAGGCCTTGCCACAGTCATCACATTTGTAAGGTTTCTGTCCAGTATGAATTGTCTGATGAGTTAAAAGTTTTGACTTTTCACGAAAGGACTTGCCACACTCATATTTGTAAGGTTTCTCTCTGATATGAATTGTCTGATGCCTTAAAAGGCTTGACTTTAAACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTTTGTCCAGTATGAATTGTCTGATGACTTAAAAGCATTGACTTTACACGAAAGGCCTTGCCACAATCATCACATCTATAAGGTTTCTCTCCGGTATGAATGGTCTGATGAGTTAAAAGGGCTGACTTTGCATGAAAAGCCTTGCAACAGTCGTCACATTTGTAAGGTTTCTGTCCAGTATGAATTGTCTGATGAGATAAAAGTTTTGACTTTGCACGAAAGACCTTGGCATACTCATCACATTTGTAAGGTTTCTGTCCAGTATGAATTGTCTGATGCCTTAAAAGGCTTGACTTTGCATGAAAGGCCTTGCCACAGTCATCACATTTGTAAGGTTTCTCTCCAGTATGAACTGTCTGATGACTTAAAAGGCTTAATTTTACACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTCTCTCCAGTATGAACTATCTGATGACTTAAAAGGATTGACTTTACACGAAAGGCCTTGCCACACTCATCACATTTGTAAGGTTTTTCCCTGTGTGCTTTGAGGTCTTGCGTTACTACTGAAGGATTCATAAAGTCATTCCCATATATATTAGAAACACTGGTTTGGGCACTAGGAGGAATTCTTTGAAGTGGTGAAAATGAGAAACTGTTGTTGCCAGACCTCTCAGCTTCATTATATTCAGAAATTATCCCGCCAATTTGAAATATCTGCAGTTTATCCTGAAAGTTAAATCCAAGCCTACTTCCAAAGGGCTTGATTCCTGCATTCTTTCCATCATGTGAATCTATTCCATCCGTAACATTTCCATTAAGGCTTACAGGTGTTCCTTTGTAATTTCTTTTGTCATCTCTCCCCTGACACTCAGAGTCACA TCONS_00087282 s 5' 8006 TCONS_00084525 r 5' 0 EMBV3_41671 ACCTCTTCGTGTCATTGAAACACCTCTCCCCCAAAGCACTTACTGCATTATGTTGGACTG Gene BVV0102_063509 + 0 NULL GK000006.2:98026692-98916662 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210387 1 XLOC_128897 NonCoding TCONS_00210387 XLOC_128897 NonCoding NonCoding - 6:98906195-98909276 - TSS157894 3081 4 TCONS_00210387_1 93 0.325868224602402 1 0 0 0 0 0 0 0 0 0 0 1.33544038790693e-06 1.48599991565992e-06 0 1.61422352387903e-05 9.7713205123154e-05 4.14025147521661e-05 0.00048005454438167 1.34715050482215e-06 0.00160364227741158 0 0 0 2.43260754766834e-05 0.000241187540061799 0.000250299548761436 8.4328961288582e-05 0 0 2.49403957197646e-05 9.13884052426687e-05 5.85418379011049e-05 XR_231976.1 LOC100297225 PREDICTED: Bos taurus uncharacterized LOC100297225 (LOC100297225), 8e-116 423 77.88 0.159039272963324 0 noncoding 0 0 0 0 -0.115389766734021 0.482071163190167 -0.0559969779325853 0.571532991053848 CGTAGAGAACTCATTTTAATCCTAATAATCTAATTTCAGCATTTTAAATAGGTCCCAATTCCTCCAGCACAATATCACATTTCCATTCACCAAATATTTTTTATTAAAGCATTTTCAATGTTAGAAATTTTTGGAGTTTCTGTAATTTATACCCAGGGGGGAAAAATACAGTCCAACATAATGCAGTAAGTGCTTTGGGGGAGAGGTGTTTCAATGACACGAAGAGGTAAAAATGATTATATTGTTAGTATAATGTAAAGCACATAAAACAGTAGTTTTAAGCACGTTAAGTGCTGCTAATGTTGTTGTTCAGTCGCTAAGTCATGTCCAACTCTTGGCAACCCCATGGACTTGCAGCATGCCAGGCTTCCTTGTCCTTCACCGTCCACTGAGTGGTGTCCACTGAGTCGGTGATGCCATCCAGCCATCTCATCCTATGTCATCCCCTTCTCCTGCCTTCACCAGGGAGTCGGCTCTTCGCATCAGGTGGCTGAAGGACTGGAGCTTCATCTTCAGCATCAGTCCTTCCAATGATATTCTGGGTTTATTTCCTTTAAGATTTGACAGCTTTGATCTCCTTGCTGTCCAAGGGACTCTCAAAAGTCTTCTCCAGCACTACAGTTCAAAAGCATCAGTTCCTCAGCCCTCAGACTTCTTTATGGTCCAACTCTCACATCAGTACATGACTATTGGAAAAACCACAGCTTTGTCTATATGAACCTTTGTCAGCCAAGTAATGTCTCTGCTTTTAAATATGCTGCCTAGGCTTAGACATAGCTTTATCTTTACTTTGCAGATGAGAAAATAGCAAAGTTAAATTCAAGATCACATAGACAGCTGAGATTTTACTGATTCAAGTACTGACTGAAGTATATAGCCATGAAACCCACATTTAACTCAGAGTATATTATCTGATTGCTTAATTGTGGGCCAGACAGCATATCAGTACTCTTTTGCTTTGGGCCAGGTTAGTAGTTGTTTCTGGAGGGTAGAGATAGGATCCTGAAGTTTTTTAAGAAGAGATATTGTCATGAGTTGGCATTATTTTTGAAGCCCTATATTTACCTAATATTTCTGCAACTTATAGTGCTAAGTTGATTCAGTCATGTCCGACTCTGTGTGACCCCACAGACGGAAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTAGAGTGGGTTGTCATTTCCTTCTCCAATGCATAAAAGCGAAAAGTGAAAGTGAAGTCGCTCAGTCCTGCCCGACTCTTAGCAACCCCATGGACTGAAGCCTACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGACTACTGGAGTGGGGTGCCATTGCAACTTACAGTAATTGTGTATAAAACAATGTATAGTTAAGTGAAGTCACTCAGTCGCATCCAACTCTTTGCTATCCCATAGACTATAGCCTACCAGGCTCCTCCCTCAATGGAATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCATAAAACAATGCTTCACTGATTGCCAGTGAATACTAGCATATTTATTGCTTGAAGACGTGGAACTTAAAGATCACCTCATCTAACCACCACCCCGCCCTGTTTTACATATGGAGATGCCAAGACCCAGAAGCCTGAACATTACACTACATGTCATTATGTTATTACGTCTTTGCAACCTCCTCTCCACTGCACTGTTGAAAGCACAGGCCATCACCCTGGTTCCAGGAAGCAAGTCTCACAGAATGCCTGTTCTCCCAGGCAGTCTCAGAGTTTGTTTTCCAGATGATGTGTATTTTTTACCAAACTCTTGAAAGCTGCCAGGAAGAAGGAGAGCACTCGTTTAGTAAGGAGTGTTTCCCTGCCATCTGTGTTACATCTGTCACAATATACCCAAGTAGAAAGAAACAAATATTTAAACAATCTTAGACTTTTCACTTGTGGGTTCAAATATTGAGTTCCTACTCAGCATCAAACAGTCCTAGAACATTAGGATTTATTCTAAGTTACGCAGAGATGGACACGACTGAGCGACTTCACCATACTGATAGAGATAACCAATATTTAAGAAATGAATGGCTGTATACACAAGTCTAAGAAGTGGTCCTGATGTTAAGGGAAGCTTACATTTCAGTTGAGAAGGCAAGACCCCTAAAGATGCTAAACACACTAAAATACCATCTACTTAAAAGTGGTGGTTGTGTGGCAGAAAATAAATACAAGAAAGATAATGAGCATCACTGGCTCCAATCACTAAGAGGGATGGGAATTGGACCCTACTGGAAATCAAAGTTATCTCAACAGGTAAAGGCAGTCCCATTAATGTTACTGACCACTGATGTGCCAGTACTGTTTAAATACTTTTTAATTTAATCCTCACAACCTTGAGGTACATATTCTTCCCATCTTACAGATAAGAAAACTGAAGCACAGGTTAGATAACTTGCCAGACTCCACTCGGCCAACGTAGTTAAGAGGAATGAGGATAAACGAAGACACCACTGGCTGTGAGGGTGGAGAAAGAGAACTAGACCTGGGGAGTTCAATCATGCACACATGCATCCATTCAGAGGACAGCAGAGAGCTCAGCCTTCAGGTCTCTTCATTTTCCACACTATCCGGGGTGTTTTTATTCACTCCCACAGCATTGCCTTCTCTGGCAATTGCCTTCCTTCTGAATCACTAATGATTTTCTACTGGAGACACTCACCTGGGTATCACGCAAACACCTCAAATTGTTAAATCCTGAAACTCTTAACTACATCTTTTTCTTTTCCCCAGGAAACTACTTGTTTATTTCAAAAGGGGATCACAGCTATTCCATAATCCAGAACTGTCTTTAGCCGGCCCTAACTCCTCCCTCCTGCTTATCTCACCTTTCCACATCACTCATGGAAATCACGGGGCTACTACATGGAACCTCATAGCAAGAAACGCCAGAAGTGACAGAAGCAAAAGCAGGGAGTCCCTGCAGGTGCCAGGCAAGCTTCGCAAAGGGCACTCATTCCCATCACAGTGGGCAAGTATGTGCCCACTCCCCTCAAGCCTGGCCACATCACACGTTCTGTATGAAGCTGAGAACCACCACC TCONS_00205903 TCONS_00205904 TCONS_00205905 TCONS_00205906 TCONS_00205907 . 3' 7377 TCONS_00205903 TCONS_00205904 TCONS_00205905 TCONS_00205906 TCONS_00205907 . 3' 10457 EMBV3_09300 TGGGAAGGCGGCATCTATGACTTCATTGGGCTGCATCCCCCTTTGGGTTGGAGCTCGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06203 TTCCTACCCTGCTGCCTGAGGAAAGAGTTTCTTCTCTTTTTGATCCTGGGAGCTTTGCAG Gene GeneID:613822|SLAMF9:XM_002685859:410_cdna Constitutive 0 NULL GeneID:613822 3 GENE SLAMF9 NULL SLAM family member 9 EMBV3_18305 AGCCGTGCCCGCAGACGCCCTTGTTTTCCAGCTGCTTTCTTCGGGACAAGCGTTTTTAAA Gene GeneID:513213|PAXIP1:NM_001077917:652_cdna Constitutive 0 NULL GeneID:513213 4 GENE PAXIP1 NULL PAX interacting (with transcription-activation domain) protein 1 EMBV3_19519 TGTACTGCTACGTGACGGTTGTGAGCCTGCAGTACTTGACTCCGCTCATCCTCACGCTCA Gene GeneID:618720|TMEM161A:NM_001098144:68_cdna UTR3_Alt 2 NULL GeneID:618720 7 GENE TMEM161A MGC138998 transmembrane protein 161A EMBV3_38229 CTCTTAAAGACTTGGGTAACTTTTCTTTGAGGGCATTGTGTTAGACTTTTTCTAAGTGAG Gene GeneID:539966|ZBTB24:XM_002690116:129_cdna Constitutive 2 NULL GeneID:539966 9 GENE ZBTB24 NULL zinc finger and BTB domain containing 24 EMBV3_17415 TGGTTCCGGATTCCAAACAAGTTTCAAAGCGACCCGCCAGCTCCCAGAGATGACAGCATT Gene GeneID:100335214|LOC100335214:XM_002687742:83_cdna Constitutive 0 NULL GeneID:100335214 5 GENE LOC100335214 NULL heme-binding protein 1-like EMBV3_18664 CACTGGATCGGGCTGAAAAATGAAGCTGGCCAGACGTGGAAATGGTCAAATGGCCAAGAA Gene GeneID:281058|CD69:NM_174014:4_cdna UTR3_Alt 2 NULL GeneID:281058 5 GENE CD69 NULL CD69 molecule EMBV3_19087 AAGCTCTCAAAGAAGCAGGCAGATCTAAAGGCAGAAAACCATCACTGGTGAACGGCCACC Gene BVT0102_124731 + 1 EMBV3_12065 GK000001.2:130792041-131089307 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32767 TCCAGCCCTTATACAAAGACCTTTTGGGATACCTGCACACTATGTCTATCCGCAGGCTTT Gene GeneID:524220|RBM24:NM_001104985:107_cdna Constitutive 0 NULL GeneID:524220 23 GENE RBM24 NULL RNA binding motif protein 24 EMBV3_26257 TTGGCTGGGATCAGGGCTATGAATGGAGGGGATGGAGAATGAATAGCAGGGTGGGCTTCT Gene GeneID:327953|HDGF:NM_175832:43_cdna Constitutive 0 NULL GeneID:327953 3 GENE HDGF MGC139641 hepatoma-derived growth factor (high-mobility group protein 1-like) EMBV3_36782 GTGGAGAAAGAAACGCAGGAGAAAAAGAGACTGAGCCGAACCAATGAAGAGCTGCTATGG Gene GeneID:616677|LOC616677:NM_001080326:217_cdna Constitutive 0 NULL GeneID:616677 12 GENE LOC616677 MGC138076 hypothetical protein LOC616677 EMBV3_12332 TCCATGAACCCAACTCTCTAGTCACATTTGCTTGGCTGTGCTACCAAATAGTTGGGATCG Gene GeneID:100313419|MIR2358:NR_030952:13_cdna Constitutive 0 NULL GeneID:100313419 2 GENE MIR2358 bta-mir-2358 microRNA mir-2358 EMBV3_21647 GCTGTCCTTCTGGGGACTCGTGCCCACGAGAGCTCCCCTTTGAGGAGAGCGAACGGAGAG Variant GeneID:100337461|LOC100337461:XM_002694653:172_cdna 207^382 1 EMBV3_18600 GeneID:100337461 17 GENE LOC100337461 NULL mitochondrial ribosomal protein L40-like EMBV3_16732 AAGTGACTCCCAGTCTGCCCACCAGGCTCCCTTCTGTGAACCACATGGATGAAATGCTCA Gene BVV0102_280923 + 1 EMBV3_43185 GK000016.2:874898-883262 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066515 1 XLOC_041206 NonCoding TCONS_00066515 XLOC_041206 NonCoding NonCoding LOC100847554 16:871333-878585 = TSS50240 812 1 TCONS_00066515_1 85 4 0.888567094193904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.04211400620068e-07 9.75796063147066e-05 0 0 0 0 0 0 1.12981008384862e-05 0 0 0 0 0 0 0 XR_227969.1 LOC100847554 PREDICTED: Bos taurus uncharacterized LOC100847554 (LOC100847554), 0.0 1243 100.00 0.847290640394089 0 noncoding 0 0 0 0 0.0645756807909949 0.584081655182612 0.0367782780353499 0.518700422063292 ATGAAGGAGAAACTGGAGGAGGTGATGAGGTACCAGAGGGACAAGGAGCTTGAGGTTCAGAACTTTCCTGAGACCTCACAGGACTCCCAAGGCCACTCTTATAACCACTGTGCACTACTGCCCAGGGCGCAGAGTCCTGAGGGCTCCGCGGGGCCGGAAGCCGGGCAACAGCCGCCCGCGGTCTCTGGCCTGGCTCTCATCTTCCGAACGACTCACCGGTCCCGCAAAGGAGCTTTCACCATGGGACCGCATCTCTAATGCTGAAAAGCAGCTGAAAATACCCAGGACCACCTGATTCTCTGACTCAGTGGGACTCAACCCCTGACCTCAGGGGAGTTTCCTGAGCCATGAAGGAAGACTTGAGCTGAGCACAGAAGGAAACATGGGAAAGGATGTTGGTTATTATTTTCCCAGCTATTATCCTGACCTGATTACTCTTGTCATTATGGGCTCTCACTAAAGCTCAGTTGAGGATAACACTAAATGCTACCGAGAATAACTTCAGATTCCTCGGATCCCATGTTCCTGCATTAGGTATTCACACAGATTATGGAAGCAGCAAGGTGGGTCTCCTGGCCCACACTCTCTTATTATAGATACGCAGAGTGTGGCTCAGGGAAGTGACTCCCAGTCTGCCCACCAGGCTCCCTTCTGTGAACCACATGGATGAAATGCTCAGCCTCCCTGGGCTGGGAGCCACGCACAGCTGAGAAACACCTTGGGCCCTGAAGCCAGAGCTGGCCACTACGGTACCTCTTCTTTAGATTCTTCCTCCTGTCCCCATTTCTTGAGTCTGTCTTTCTCCACACGTT EMBV3_06288 ACGCCTGGGATGCTTATTTTTCCATGGAGATCACCTTTTGGCCGTGAATGACCTGAAGCC Gene GeneID:529092|LOC529092:XM_002698528:181_cdna Constitutive 0 NULL GeneID:529092 26 GENE LOC529092 NULL similar to RIKEN cDNA 9930023K05 EMBV3_06718 CTTCTCGGTGACTATCAGGATCCCTTCTGGAGCCTACTCCACCACCCTAACCTGTTGAAT Gene GeneID:518435|SYNJ2:XM_002690365:12_cdna Constitutive 0 NULL GeneID:518435 9 GENE SYNJ2 NULL synaptojanin 2 EMBV3_30596 CAGTACCTGAAGTCCAAGGAGTACAACAGGTGTGCCTGGACAGTCGTGCGAGTGCAAATA Gene GeneID:525550|LOC525550:XM_002689541:5_cdna Constitutive 0 NULL GeneID:525550 8 GENE LOC525550 NULL similar to Interferon beta-2 EMBV3_23901 ACAGAGGCAATAAACCTGAGTAACATGAGAGAGACTGTTAGCAGGGGATGGGGAGACCTC Gene BVV0102_251705 + 0 NULL GK000018.2:59195393-59217237 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091304 1 XLOC_056079 NonCoding TCONS_00091304 XLOC_056079 NonCoding NonCoding - 18:58848874-58856850 - TSS68650 7976 3 TCONS_00091304_4 91 0.793756268806419 1 0 0 2.51967402544328e-06 1.054755858066e-07 1.15682475942086e-07 3.77751837371795e-07 8.1541137475115e-08 2.01068651857406e-06 3.70782147218654e-07 8.95021409115661e-07 1.19986055655852e-05 2.57653300454718e-05 2.47180774270901e-05 1.4989155588659e-07 3.72764505919686e-05 1.47941080501265e-06 0.000646433598824476 0.000592174799227345 0.000624093470198572 4.12752561096426e-06 5.92246426789095e-06 7.22528157285322e-07 0.000271556575527527 0.000350743120184288 0.000375095125100175 4.45989833625687e-06 6.37788135158709e-06 1.19795913724718e-06 0.000178442887536541 5.92531634608206e-05 0.000186160624980672 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1757 88.91 0.162111334002006 0 noncoding ATTAAACGTCATGTTATGTCCATAGTTAAAGTACAAAGTGTTGCACCAGTCCATTTTAGGGCTGGTAGATGTCATCAGATGAAGAAGAGGCATGACATATGATTGTTGTCAAAAGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGAGATGTCCACCACAGGAAGCCTTTCACTGATGAAGAGGGGAGCGCTCCGCAGACCCAGCAGTTAGACCAATGTGCAATGCAGCGTAGGGGTGAGCCCAGGACAGGTAGGCATTGTCTTGAGGATCAAACGGCACACTCAGGATTTTTGGAGTCAGCAGAAGTAGGCTTACATAGATTACAGGCCTATCTGAAAAGTACAAAGTCAGAGCATAGAAAGTAAAGACATAAAATGAAGTCACTTAGTTCTGGTCAGGGTGCCATCTCTTAACTCAAGTGTGATGTAACCACGAATCAATTCCTGGCACTTTGACAGCTGTGGGAGAAGAAAGAATAACCTGTTAAGGGCCTTCCCAGAGGGGCTCGAGGAATGGGACCCCAGATCCCAATGTTTTTATGAGGACCTTGGTTCCTGGCTCAAATAGAGGCTTGCTTGACTCAGAGCCTGGGTCAGGAGTTGTCTCCCAGAGTTCTGTTAATGCCTGTTGAAAAGCTGAGAGCTGAGTTACATAACTAGTTAATTCCAAGGCTTCAGGGTCTATAACGATGTCTGTGCACAAGAAAAGCCTTCCATAAATAGATTCAAAGGGGGACAGTCCCTCCTTTTTGGCGGCAGTTCGAGCCCTCACTAAAGCTATGGGTAGGACTTTAATCCAATTGTCCTCCATCTCTTGAGTTAATTTGCAGAGATGTCTTTTGATAATGTCATTAGCTTTTTCAAACTTTCCTGAAGATTGGGGTTTCCCAATCTTCATTTATCACTGTAAGTGATATTTTATTCCTAGAGCTTTAGATACCCCCTGAGTTACAGCAGCTTTAAATGCGGAGCCATTGTCACTCTGAAGGCTCCTTGGCAGCCCAAACCTGGGGATAATTTCATGGATTAAAATCTTTAGAACTTCCTTAGCCTGCTTACTACGACAGGGAAAAGCCTCAGTCCATCCAGTAAAAGTATCTACCCAAACTTGTAAGCAAGAATATCAAATAGCTTTTGGCATATGAGTAAAATCAATTTCCCAGGCCTCTCCAGGATACTTTCCACTTCGTTGTAATCCAGATATTGCTAGGTTCTCAGTCTTCGGGTTATTTTTCTGACAAACCTCACACATTTTGATACGTTCTTTAAAGTTTTCATTACGTTTTTACTTTCAAACAAACGCGAAGCCATTTGGTAAGTACTCTGTGCACCCAAATGAAAACTCTGGTGTAAACCCTTTAAGAATTTTCCATTGAGCATTTTCAGGAATTATTAATCGTCCATCCTCAGACTGTAACCATCCGTTATCTGTAATCTTACTTCCTCTTTTCTCATATCTTTCTAATTCTTCCTCAGTATATTGTGGTTTTTCCTGTTCCACAGGACCTGTCCAGATCAAAGGCCTCTGCAGTGAAGGGGTTTCCTAAAGTGCTGCTTTTCTGGCTTGGCAGTCAGCCTGCTGATTACCTTCAGCTGCTTTACTCCCATCCCTGCTGTGCCCTTTGCAATGCATAACAGCTTCTTCTTTAGGACAATATATAGCAGTTAATAGGTTCTCCTCTTGCTGTTTTAAACTTTCGTTCCATATTGCAGCATGAGCATATAAAGTCAAATAAGCATACTTAAAATCCATGTAGATATTTACTAGCTGCCCTTTGCTTAACTCTACAGCTCGGGTCAGAGCCACAAGCTCTGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGTTTCTGAAACCTATTCAGCAGTCACCAAGGTGTAACCTGCTTTATGCTTTCCATCCCAAACAAAAGAGCTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCATTAGATCCTCCCAAGCTGCATAGTTTAAAGTTAGAAATTGGGAACAGTCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAACGTGGCAGGATTTAAATTTCCACAAACTTTCAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATATTTAAAAGTCTACTGTCTGCCATCCAAATATTAACCTTAGAATTTAAGATTCCATTCACATCATGAGAAGTCAGTACAGTAAGATTTTGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGCCCCAATTACTCTTAGGCAGTGGGGCGACCCAAATGAAATTACATCTGATTTTCTGCGTAGATAAGCAATAGGTTGCTGGTGTGGGCCTCGGGCTTGTGTCAAAATTCCCAAGGCCATACCTTTTCTTTCAGTGAGAAATTAAATCCTGACCCTGTGGGCAAGCTCAAAGTGGGAGCTTGCAGGAGGGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTATCTGGAGACCAAACCAGTTTGTCTGTTGGGGCCTGCTGAGTTTCAGCTCTAAGTTTATATAAAGGTCAGGCAAGTTCCCCATAACCCGGAATCCAAATACGACAGTAGTCTGTGATTCCCAGAAATCTTCGCAATTGTCTTAAAGTCATAGGTAGGGGATGATTTAGTATGGGTTTAATTTTCAGGGCCTATGGCCCTAATCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATGGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTATAACTGCAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCTTGAACAAGCTTATTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACCACTTCAGAGCTATTAAAGTTTTGTAGATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCATGAAATCCCTGGGGCAAAACTCTCCAGGTTAACTGAGAAGCTGGCTGTGTAGGGTCTTCAAAGGCAAATAGAAATTGACTTTCTTCCGCCAAAGGCACAGCATAGAAAGCATCTTTTAAATCAAGTACTGAGAAATATTTGGCTCATTCAGGAATTTCAGACAATAGAGTATAAGGATCAGGCACCACGGGGTGTAAAGGAATTACAGCCTCATTTATTATTCGTAAATCTTAAACTAGTCTCCATTTTCCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCATGGAGTGTTACAGGGAACTAATAGTCCCCGCACCTTTAAATTTTCGATGATGGGTTTTAACCCTTCCTTAACCTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAGTAAGTGTGGGTCTTTGAGCTTGACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTATATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATAATCAGGAAAACAGAGGCATGGACCTTGTTCTGTGTCAGTTCAGTTCAGCTGCTCAGTCGTGTCTTACTCTTTGAGACCCCATGAATCGCAGTACGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCATGTCCATCGAGTCAGTGATGACATCCAGTCATCTCATCCTGTTGTCCCCTTCTCCTTCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCGATGAGTCAACTCTTCGCATCAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCGGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAATCCAAGGGACTCTCAAGAGTCTTCTCTAACACCACAGTTCAAAAGCATCAATTCTTCGGCACTCACCCTTCTTCATAGTCCAACTCTCACACCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGATGGACCTTTGTTGGCAAAGTAATATCTCTGCTTTTGAATATGCTGTCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGCGTCTTTTAATTTCATGACTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAAAAAATAAAGTCCGACACTGTTTCCACTGTTTCCCCATCTATTTCCCATGAAGTGATGGAATCGGATGCCATGATTTTCATTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCACTTACACTTTCATCAAGAGGCTTTTTAGTTCTTCTTCACTTTCTGCCATAAGGGTGATGTTATCTGCATATCTGAAGTTATTGATACTTCTCCCAGCAATCTTGATTCCAGCTTTTGCTTCTTCCAGCCCAGCGTTTCTCATGATGTACTCTGCATGACATACTCCTTTTCCTATTTGGAAACAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATATAGATTTCTTAAGAGTCAGGTCAGGTGATCTGGTATGCCCATCTCTTTCAGAATTTTCCACAGTTGATTGTGACCCACACAGTCAAAGGCTTTCGCATAGTCAGTTAAGCAGAAATAGATGGTTTTCTGGAACTCTCTTGCTTTTTTGATGATCCAGCGGATGTTGGCAATTTGATCTCTGTTCCTCTGCCTTTTCTAAAACCAGCTTGAACATCAAAAAGTTCACAGTTCACATATTGCTGAACCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGAAATTGTGTGGTAGTTTGAGCGTTCTTTGGCATTGCCTTTCTTTGAGATCGGAATGCAAACTGATCAGTATATTCCTCCCCAAAGGGGTGATGGAGACTCTGGCACAATCAGAAACTCGAATGAAAATAGCACAGAATCTCAGTTACAGCATAAAGAATAACTGAAATAATACCCTTTGGCTCGTCCAGACAGTCCCATTACGGAAGTGGATTGGGAAGGAAGTGGGCCAGGGGATTCAGTAAGCACGGGGTAAGTTGTCCCAGTATCTAAAAGAAAATCGACAGATTGGCCCCCCACAGTTATTAATACTTGGGGTTCCTCAGGTGTAATTAGGATGGGAGCTTGTGTGGGGACCCCTGGGCACCTTCAGTCCTGGTTGTCTTGAGAGTGTGACCCCAGGTATCATTATGACAACACAGTATTTTAAGAGAAACCTCCTTTTAAGTTTGTATAGAGAAGGAAAAAAATATCGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGCCTATTTCCTCCATTTGGAGACCCCCTGGCCTTCCTGCCTGTTACCCTCTCAACATCGTGTAATAAAACAGACATATTTTCAACTGTGGTTTTACCAAAGACATGAATTGTGTGTATGTTGTTATGTGTGCACACACAAATGGATATTTCTGGTCTTAGCTCTTTACCAGAGAATAACGGAGGTATGACATTAGATCTTGTGAAATTAAAGGCATTTCTTTGAGAAATGGGGGGAAAAAAGAACATTTAACATGATAAAACCAACAAAATAAAATGCTTCTACCGGCATCCAGCTTCAGCAGCCAGGGATTCAACCTGAAGGGGTGAGCGGTGTCAGCACGAAACGAGACAGCCTCTCAGTTTTCTTGGACTGCCTATTTATTTCAAGCTTATGATTCTTTTTTATACTTTTACAAAAACATTAGGTCAGGGGTTTGACATTTTCAGTTCCCCCTGACCCAGATTTGTTGTCTCCATGAATCATTGTTGCCCCTCAAAAGGAGTTCTTGCCTCAGAGATTCTCTTATTTACTTCTTCTCTTGTGTCCTTGTGAATACGTTGTAACTCATGCTAATGTCTGGGCTGCATACCACATCCCTCAGTTTATTTCTTATCTTTCTAAGTCCTGTTTGCCCCTAGTATCCTGGCTCACTATTTCTTAGAAAGGGCTTCTAGCTGTTAATATCTCTAAAGTCCCTAAACTCTATAAGCTATAATAGAATATGCTAAGATTACAACATGCCTTAAGTCTTTAGCTTCTAACTATTTTAAATATTCCTAAGCGCTAAATTCAGCAAACTCCTTTGCCAAAAACACTTTCCTTACAAATAGGCTTCAGATAGCAATCACTCTTTTGTAAAACTCCTTGAACAAATGTCAGTGATTAACTTTATGAATTATTCGCTGAGCACAGCTGCAGAAGGCTTTGTGCCTTCTCATGCAGTACTCTTGCCTGGAAAATCCATGGACAGAGGAGCCTGGTAGGTTGCAGTCCATGGGGTCGCTAAGAGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCTCTTTCATGCATTAGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTCTAGAATCCCAGGGACTGCAGAGCCTGGTGGGCTGCCATCTATGGGGTGACACAGAGTCGGACACAACTGAAGCGACTTAGCATTAGAATGCTCCTCTCAAGAACAGTAAGCACCTTAATATTCTTTTCAGTCAACTCAGCCAAGGAAAGGAAAAAGCAAGTCAGAATCACAAAGCCTAACCTCTTCATCTCGGTTCTGTGCCTGCGGGACAAAGAGAAGGGGTTGTGGCCGTGCCTCCGTTTTGTCAGTAATGCCTAACGCGGCTCCCAACATGCTTCATTCTTTCCTTTCAAAAAAAGAAAAACAAAACAAAACACCTAGTTTAACTGGTTAGTTTAGTGGTCTGTTTTCTCCATTTTCTATGATCAGTGAAAAAAAAAAAGTGAGCTGTGTGGTGATATGAAGATGTTTCCCTCAGGTCCCTTTTTGACTTTTCTGTGCAAATGAGGAAGGATGGACTGGATTGACTTGGAACCTTCCAACAGAGCCTCTCTATTCATAATGAAAAAGATTGCTCAGATCCTATTTCTAAGCTGACCCGTTACACTGTTTTTTGTACCAGTGGATATATATTTGCAATTCTGTATTTTTAAAATATTTTACTGCAGTCTTATAATAAAGAATTACCTGCTTGGTATCACTTTGACCCAATCTTGAAAGAAAAGTTTCTTTTGCTCAGATACATGACAGATGTTCATGGTCTTAAATGGGACGGGCAATAAGGACAAACTTGGCCCCCTTGCCCTTCAGCCTCCCATTTCACTATTCAGTTATACCCAGTTGTCTTCACTCAGCTCAGACCTTCTCATAAACGGCTTCTCTCTGGGCCTGAGGGAGCCCACTTGTAACATGGAGATGAGCAACTAGACCGGAAACTCTGAGCGTGAGCAACACTGACCCCTGAAATGATTAGCCAAATTGGCTGTGTGTCTGTGTGTGGCAGTTCTGGTTTGGAGGGAGTTTCTGGTGGTAATTCGAATTTTAAATAGATCCCAATCCTCCCTCAATGAAAAACGAAAAGGAAAACTGTAGGATGGAGGCAGGATCACAGGCTCAGAATTAGATGACTTCTATGAATAAGGCTAAATCTGAAGGGAGTTTTTTTTTTTTTTTTTTTTATGTCCTGACATTCAGACCTCCACTGGCTTTCATCTGTTCTTGGGACAAAAGCTTACTCCTTGCTGTGGCTCCACAACTCTCTGTCAAGCTCAGGGCCCTGTCAGTGTCTCCAGCCTCATCCCGGGAGCTGACCCTTTCTTTGCTCATGGTTTAGCCTGTCCTGGTCTCATTTACCTTTTCTCTGTTTCTAAATACCAAAACCATTTCTGTCTGGCATCATAGTTCCTTTTCTCACCTTCAGGTCACCCTGGCTCAGGCCCTTTGTCACCCTTCAAGTTTAGGCTCAGAGAGGTCTCCCCATCCCCTCCTAACAGTCTCTCTCATGTTACCCAGGTTTATTGCCTCTGTATCAGTTGCCATCAGCAGAAATTAAGGCCCTTCTTCATGGGTTATTTTGAGTCCTTCCTGGTTCCCCTCTTTTTAGGGCTGATAGTGTTCTTCTTCTTCCCAGTGTGGCTGCAGTACCTGATACTGGAAATGTCTTTAGATGACTGGACTATGGGTTGAGCTGAA TCONS_00084491 . 3' 2965 TCONS_00084491 . 3' 10940 EMBV3_20806 CTTTCTAGGGAGCAGAGACGATGCATCTGAGCAGTTCTTCCTACAGACCTGCCCTGTTGT Gene BVT0102_223103 + 0 NULL GK000012.2:89552276-89558327 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035961 TCONS_00035964 TCONS_00035960 TCONS_00035962 TCONS_00035959 1 XLOC_021043 Coding TCONS_00035959 XLOC_021043 Coding Coding ARHGEF7 12:89451180-89553735 j TSS26273 4679 1 TCONS_00035959_4 774 20 0.954570275172104 0.00109734604160909 0.000682623616266703 0.000524114523518482 0.000247147831317452 0.000271104417873821 0.000391295073548231 0.000171565305676173 0.000127185660126381 0.000974263444881992 0.00075144305231333 0.000374433639424001 0.000811904959158351 1.91239763392423e-07 0.00118538610612168 0.00011489055796747 0.00283049436278417 0.0024987540934198 0.000912052939546718 8.97429974574056e-05 0.000189443109663202 0.000595891834416168 0.000788046847020212 0.000955311472265782 0.0024834875343346 0.000634842961530622 0.000238561054993855 8.51604790270575e-05 0.00112642583333382 0.000592698932578722 0.000440650510500984 XM_005194211.1 ARHGEF7 PREDICTED: Bos taurus Rho guanine nucleotide exchange factor (GEF) 7 (ARHGEF7), transcript variant X3, mRNA. 0.0 8410 100.00 0.99636674503099 XM_005254091.1 ARHGEF7 PREDICTED: Homo sapiens Rho guanine nucleotide exchange factor (GEF) 7 (ARHGEF7), transcript variant X8, mRNA. 0.0 2711 87.39 0.469972216285531 TCONS_00035959_4 sp|Q14155|ARHG7_HUMAN ARHG7_HUMAN Rho guanine nucleotide exchange factor 7; 0.0 1323 88.27 0.881136950904393 5 coding 0 0 0 0 -0.0387229856639054 0.792807587362951 0.00908854610671365 0.849514112254884 GGAGCGCGAGCCGGCCGGACCGCGGCGCCGCCCGAGCCAATCGCCGTCGCCGGGCTCTCCATGGGCGAGCGGGAGGAGGGGGCGGTGGGCGCAGCCGGCCGGGCCGCGGCCGCTCCGAGGTGAACGGCGCCGAGACGCGCTCGCGGCGCGGGGAGGCCGGGCGCGCCGCCGCGATGAATTCCGCCGAGCAGACCGTTACGTGGCTCATTACCTTGGGCGTGCTGGAGTCGCCCAAGAAAACCATCTCGGACCCAGAGGGCTTCCTGCAGGCGTCTCTGAAGGATGGGGTGGTCCTCTGCAGGCTGCTGGAGCGCCTGCTGCCCGGCACCATCGAGAAAACGTTTGATGCAAACGATTTGTATCAGGGGCAGAATTTCAACAAGGTCCTCAGCTCCCTAGTGACGCTGAATAAAGTAACAGCAGACATCGGCCTGGGGAGTGACTCCGTGTGCGCCCGGCCCTCCTCACACCGGATCAAGTCCTTTGACTCCCTGGGACCACAGCCTGCGCACGGCCGGACTTCACAGTTGTTCCAGGGCCAGTACCGCAGTTTGGACATGACCGACAACAGCAACAATCAGCTGGTCGTCAGAGCCAAGTTTAACTTCCAGCAGACGAATGAAGACGAGCTGTCCTTCGCAAAAGGCGACGTCATCCACGTGACGCGGGTGGAGGAGGGGGGCTGGTGGGAGGGCACGCACAACGGCAGGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGGTCAAGCCCAGCGAAAAGCCCGTGTCGCCCAAGTCCGGAACCTTGAAGAGCCCTCCCAAAGGGTTCGATACGACCGCCATTAACAAGAGCTACTACAATGTGGTGCTACAGAATATTTTGGAAACAGAAAATGAATATTCTAAAGAACTTCAGACTGTGCTTTCAACCTATCTGCGGCCCCTGCAGACCAGCGAGAAGTTGAGTTCAGCAAACACATCACATTTAATGGGAAATCTAGAAGAAATATGTTCTTTCCAGCAAATGCTTGTACAGTCTTTAGAAGAATGCACCAAGATGCCGGAGGCCCAGCAGAGGGTCGGGGGCTGCTTCCTCAGCCTGATGCCGCAGATGAAGACCCTGTACCTGACATACTGTGCCAACCACCCGTCGGCGGTCAGCGTCCTCACGGAGCACAGTGAGGAGCTGGGAGAGTTCATGGAGCTGAAGGGCGCCAGCAGCCCGGGGATTCTCGTGCTGACCACCGGCCTCAGCAAGCCGTTCATGCGCCTGGACAAGTACCCCGCGCTGCTCAAGGAGCTGGAGAGACACATGGAGGATTATCACCCAGACAGACAAGATATTCAGAAATCCATGACTGCCTTCAAAAACCTTTCAGCGCAGTGTCAGGAGGTACGGAAGAGGAAGGAGCTGGAGCTGCAGATCCTGACGGAGGCCATCCGCAGCTGGGAGGGCGAGGACATCAAGACCCTGGGCAGCGTCCTCTACATGTCGCAGGTCCTGATCCAGTGCGCCGGCAGTGAGGAAAAGAATGAAAGATATCTTCTACTCTTTCCAAACATCTTGCTGATGCTGTCTGCCAGTTCTAGGATGAGTGGCTTCATATATCAGGGAAAGCTACCAACGACAGGAATGACAATCACAAAGCTTGAGGACAGTGAAAACCATAGAAACGCGTTTGAAATATCAGGGAGCATGATCGAGCGGATCTTGGTGTCCTGCAGCAACCAGCAGGACCTCCACGAGTGGGTGGACCGCCTGCAGAAGCAGACGAAGGCCGCCTCGGCGGGGAACCCCAGCAGCAAGCCTCACTCGGTGCCGTCACACACCCTCCCCTCCCACTCCATCACCCCGTCCAGCAAGCATGCGGACAGCAAGCCCGCGCCACTGACACCCGCCTACCACACGCTGCCCCACCCCTCCCACCATGGCACTCCACACACCACCATCAACTGGGGGCCCCTGGAGCCTCCGAAGACCCCCAAGCCCTGGAGCCTGAGCTGCCTGCGACCTGCACCCCCCCTGCGGCCCTCGGCTGCCCTCTGCTACAAGGAGGACCTGAGCAAGAGTCCCAAGACCATGAAGAAGCTGCTGCCCAAGCGCAAGCCGGAGAGGAAGCCCTCGGACGAGGAGTTCGCGCTGAGAAAAAGCACGGCTGCGCTGGAGGAGGATGCCCAGATCCTGAAGGTCATCGAGGCTTACTGCACCAGCGCCAAGACGCGGCAGACGCTCAACTCAAGTTCACGCAAAGAATCTGCTCCGCAAGTTTTGCTTCCAGAAGAAGAGAAAATTATAGTTGAAGAGACTAAAAGTAATGGTCAGACAGTGATAGAAGAAAAGAGTCTCGTCGACACTGTGTACGCACTAAAAGATGAAGTCCAGGAGCTACGACAGGACAACAAGAAGATGAAGAAGTCTCTGGAGGAGGAGCAGAGAGCCCGCAAAGACCTGGAGAAGCTGGTGAGGAAGGTTCTCAAGAACATGAACGACCCTGCTTGGGATGAGACGAACCTCTGAGGGGCGTCCTGGTGCTTCGTTAAGACCGGTTCCGAGACTGAGCCGGAGCCCCTCGACCCCCGCCCCTGACGCTCAGGCTGCGGGCGGGGCCGTGCGTGGAGACTGCAGCCAGGCGGCCGTGAGCTCCAGGCCGAGCCCAGACCACGTCCCCCCCACACCCAGCACCTCGTTCTGCAGTAAGCGCGGTGACGGTGTCTGGACTTGCGGGCTCCGAGTGAACACGTGTCAATGTTAGGTGTGCGTTCCCTGTAAATGCCCCGTTCTGAACGCAGAGAGGTGGTTCCGTCTGGGCTGACTGCTGGGCCGCAGGCCCTTTGCACTCAACCTCTCTGCTCCCGTGCCCTGGGGCTCACCGCTCGTGGGGACCATAGGCTGCAGACACATAGGTGTTTCTGGGGGTGCCTGCTGGGCTGCGGTGCTCCAGAAACACCGCCCGCTGTGTCTGCCTGTGGCTCACCTGCTTAGACCTGCAGGGGCCCCGTCTACCCTCCAGGCTCCCGGTCGAGCGGGGTCGCAGTCCACGTGCAGCACTGGGGCTGAACCCGGGGCCTGGCCTCAGCCCCGAACCCGGGAACCACGTCTGCTGCCCCTGGGCCCCGTGACAGCTGTGTGTACGCCCACCTCGTGTGAGCACGTGCATGGCGGAGGGTGCCTGGCTGGGGCTGGCCTGGTAACTGGGCCAGGTGCATGGTCCCGTCCTCCCAGAAGGAGCAGCTCCCTGAAGCCTGTAAATAAAGTGTGTTATTTATTGCACGTTGCTGCAGCCCGTGAGGACGCACTGCTGGGCGCAGGTGGCCTCTCTGCGTGAGGCCACTCTGACCCCAAAACCTGTCTTCCCGTCGGGCACGGGCAGGCCTTCCGTGCTCACTGAGGAGGCAGTGTCTGAACTGTTTATGCACAAATCAAGCAATAGAACACGCGAGACTCCCCAAGGAGTGGGGGTCAAGACCAGGCCCCCCACGCCAAGTCCAGATGGCCAGGGCCCATAGGAGGGGCCCAGTCCTCGTGCCTAGAGCCCCGCCCGGGGTCCAGCCAGTTCACGGGACCTGCTCCTCCGCCCCGCTCTTCTGAAGAGGTCATTTGTAAAGTGAGATGAACTTGGAGAGGACAAGTGTCGTGTCCCTAAAAGCCCAAGCCCCAGCCCCTGGATCAGGGGCGTCTCAGAAATGCCTGTGTGGCATCAGACGCGACTGTGACGTGCGCTCCTGTGTCTGCGTCGGCCGGACGCCCCTGAGCCGGAGCAGCTGCTCATCTGGGCGCCCGGTCCGCCTCGGCCCCGCCCTCAGCCTCCCCTGCTCGGGGGAGGCTGGGGCCTTGACGGCCTTGACCTTGTAACGGGAGCTGCCGGCTGCCTGTGCTTGCGTTTTGTTTTCTTGGTTAGCGGCAGGGCTGGGGAAGGTGGCCCTGGGAGTGTTTGGTGAGCCCCGTTCTCAAAGCAGGCTCTCTGGTGAGGCGTGAGACCTCGTGGTGGGAAACAATCCGATCGCGTGTGCTGGAGTTTGCTGTCTCAAGCGAATTCTCACTCAGGAACCACGTCCTCACCTGACTCTCCAGCGCTTGCTGCGGGTGGTGCCGCCGCCCTCAGCCCGACGGGGCGCCCGCAGAACCTGCCTTAACTGCTGACTTGAGCCTCGAGGGGGCACACATGTGTTCTCAGCCCTCCTCCCGAGGGGTGGCCGTTGACATGCTTGTGTGACGCATCCTTCCCGGGCCCCAGGGTTTTTACTAAGCTTTCTAGGGAGCAGAGACGATGCATCTGAGCAGTTCTTCCTACAGACCTGCCCTGTTGTCAGTGGACTGCCCCCGTGTCTTGGGGTACCCTCGAGGAGCTCGGGGTCCCAGGGGACGTCAGGAAGGGGCCGTCTGCCTGCTGGAGTCGCCTCTGCCCCACCTTCCACGGACGAGGAGACGGAGCCACGTCCTTGCCCGGGCGGGAGGGGACGGACCAGAGCTGTTGTGGAGGCGTGCTCTGCAGCAGGTTGAGCTATCCTCGCGGACTCCCCACGGGCCCCGGTGCCCGCACCCGTGTTTCCGTAGGACGCGCAGGGCCCCCTTTCACAGCCGTGGGGGTGGTCCACGAACGACCCCCGGTGTCCTGGTCTTGACTACTCACGCTCTGTTGTAATTATTATTAAACTGACTATTTTTCTTATGTTACAAACACATCACTTCATTGGCTGT EMBV3_00547 CTCCTGCCGTGCTTGAGGAAGAAGATACTGAAGATTAGACATGGTTGGGAAGATGTCACC Gene GeneID:515156|STEAP1:XM_002686876:12_cdna Constitutive 0 NULL GeneID:515156 4 GENE STEAP1 NULL six transmembrane epithelial antigen of the prostate 1 EMBV3_09937 AGATCTTGGGCCTGACCTTCGCCATGACCATGTACTGCCAGGTGGTGAGGGCAGATGCCT Gene GeneID:505288|TSPAN4:NM_001101852:242_cdna Constitutive 0 NULL GeneID:505288 29 GENE TSPAN4 MGC166145 tetraspanin 4 EMBV3_37509 GCTGGAGATTTCTCTCTGGACAAAGTTCCATGGTCTGTTGGACCAGTTGAAGTTGATAGC Gene GeneID:616665|FNBP1L:XM_002686227:227_cdna UTR3_Alt 2 NULL GeneID:616665 3 GENE FNBP1L NULL formin binding protein 1-like EMBV3_33687 TGTCTCGTCACAGATGGACAGATGGACAAATGGAAGTGTGGATGGATAGTGGGTGCATGG Gene GeneID:505847|CDC25B:XM_002692382:288_cdna Constitutive 2 NULL GeneID:505847 13 GENE CDC25B NULL cell division cycle 25 homolog B (S. pombe) EMBV3_14657 TCAACCTCTCCAACAACCTGCTGTCCACGCTAGAGGAGAGCACCTTCCACTCAGTCAACA Gene GeneID:618425|LINGO3:XM_002688955:93_cdna Constitutive 0 NULL GeneID:618425 7 GENE LINGO3 NULL leucine rich repeat and Ig domain containing 3 EMBV3_06878 GTGTTAATTCCTGTAAAACAGTTTCCTAAGGACTATAATGATGAAATCAGGCAGGCACAG Variant GeneID:615095|KHDRBS3:NM_001083512:23_cdna 216^479 2 EMBV3_39689 GeneID:615095 14 GENE KHDRBS3 MGC142791 KH domain containing, RNA binding, signal transduction associated 3 EMBV3_17151 GCAGCTGCGAGCGATTTCTTGGGACCAAAGTGTTAACTCCGGAGGGTCAAGAGATTTCAA Gene GeneID:520759|LHX5:NM_001102061:201_cdna Constitutive 0 NULL GeneID:520759 17 GENE LHX5 MGC165790 LIM homeobox 5 EMBV3_26400 TTATCCTCTGCAAGGCTGGCTTCTGGGTAAGAGTTGGGAGGTGTTTTAGAGGCTCAGTCA Gene GeneID:615704|SART1:XM_002699352:241_cdna Constitutive 0 NULL GeneID:615704 29 GENE SART1 NULL squamous cell carcinoma antigen recognized by T cells EMBV3_39614 CAGCTCAAGGTCCGCACACCAGGCATCTACCTGCTCATCTTCGACAACACTTTTTCCAGA Gene GeneID:100139246|FYCO1:XM_002697098:213_cdna Constitutive 0 NULL GeneID:100139246 22 GENE FYCO1 NULL FYVE and coiled-coil domain containing 1 EMBV3_43492 ATATCACACTTTGTTACATATTCATTTGAGGATAGTTATTTGGGTTTTCTGGTTTTGGTT Gene GeneID:789977|LOC789977:NM_001103310:17_cdna Constitutive 2 NULL GeneID:789977 8 GENE LOC789977 MGC157227 hypothetical LOC789977 EMBV3_39529 TTCTCATGGAAATGAAGGACGAGGGGCTTAGAGACAGTGAGAGAGGAGGATTTAGGAACC Gene GeneID:538905|FNDC5:NM_001105421:154_cdna Constitutive 0 NULL GeneID:538905 2 GENE FNDC5 MGC159851 fibronectin type III domain containing 5 EMBV3_35890 TGTATGTACTGATTGTGGTTGATGGATTGGGAGGGCTCTCCGAGACAAGCAGAGTACGAC Gene GeneID:782069|LOC782069:XR_084027:143_cdna Constitutive 0 NULL GeneID:782069 22 PSEUDO LOC782069 NULL similar to G protein-coupled receptor EMBV3_03240 CTGCCCAGGCTGGGTCTGCTAAAGGAAAAGTACAGTTTCAGGGCAAGAAAACGAAATTTG Gene GeneID:338071|SSB:NM_176665:199_cdna UTR3_Alt 2 NULL GeneID:338071 2 GENE SSB NULL Sjogren syndrome antigen B (autoantigen La) EMBV3_16417 CCACTGCAGGACACAATGCACCTGTTTTCAGCCTCTATGTAGCAAGGATTCCCTTTCCTC Gene BVV0102_393272 + 0 NULL GK000007.2:54029851-54050661 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00433 GGGGTTATGCCTACAAAGCTGAGGAAGCTGGATCTGAGTGGTAATCAAGAAGCCACAGAA Gene GeneID:507232|EID3:NM_001100312:959_cdna Constitutive 0 NULL GeneID:507232 5 GENE EID3 NULL EP300 interacting inhibitor of differentiation 3 EMBV3_06169 TGTTCTGCGAGGAGCGCGTGGGCTACAACTGGGCCTACAACACCATGCTCACCAAGACCT Gene GeneID:521542|DEPDC5:XM_002694632:1_cdna Constitutive 0 NULL GeneID:521542 17 GENE DEPDC5 NULL DEP domain containing 5 EMBV3_28162 CAGTGACTTTCTGTAGGCAATTTTGTACCTTCGTGGAGAAACGTGTCACTTCCCCTCAAC Gene GeneID:767860|LRRN2:NM_001076971:112_cdna Constitutive 0 NULL GeneID:767860 16 GENE LRRN2 LRRN5 leucine rich repeat neuronal 2 EMBV3_09309 AGGAAAATGAGACTCCCCCCAAGTCACCACCTGCCTCTCAGCACCTTGTTGTCCAGAAAT Gene GeneID:617252|FBXO21:NM_001078071:279_cdna Constitutive 0 NULL GeneID:617252 17 GENE FBXO21 NULL F-box protein 21 EMBV3_43150 CAGCGTTGTGGCCTATGGAAGAATGAAAAACACGTTGGATGAACGCGTCTGCCTGGACCA Gene GeneID:540652|GALNT8:XM_002687898:113_cdna Constitutive 0 NULL GeneID:540652 5 GENE GALNT8 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8) EMBV3_24263 CAAAGCCTGACCTCAAACCCTGTTCAGGCAAGTCAGACTCGTGCATTCTCCCCGGCGCTG Gene BVT0102_446251 + 1 EMBV3_18405 GK000013.2:62501815-62544923 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049531 1 XLOC_029662 NonCoding TCONS_00049531 XLOC_029662 NonCoding NonCoding - 13:62532694-62533263 - TSS36707 569 1 TCONS_00049531_1 45 1 0 4.78232291952661e-05 5.29794633381137e-05 0 0 4.3384696245578e-05 2.20029812192782e-05 0 4.45497227240625e-06 6.9333269639507e-06 2.53088149576735e-05 5.36422238413572e-06 0.000276502732792323 1.68089036437679e-06 3.16906217866929e-05 8.62251382685017e-06 0 0 0 0.000108383090868256 6.31936375547295e-05 2.93435781998096e-05 0.000573830273851078 0 0 3.0441399640736e-05 0.000179541736571699 0 3.3761623059935e-05 2.13295738003648e-05 0 0 noncoding 0 0 0 0 -0.0735183400870559 0.556387185400614 0.0398056671004828 0.539382633018555 GTTTCCTTGACTTTCTGGTGGCTTCCCTGGAGGATGGTTCTCCTCTTTCACAGATGAGGTGCTGAGGGCAGAGGAGCCATTTGCTCAAGCTTGCTGGGGCAAAGCCTGACCTCAAACCCTGTTCAGGCAAGTCAGACTCGTGCATTCTCCCCGGCGCTGGGCGCTGTGCTAGATGCTGGGTCCAGAAGGCAAGGAAGGGGCCTGACAGTCATGACAGTGAGGGGGAGCTGCCTGCTGGAAGTGGCAGGTGGCCCTGGCTAGGAGCAGCTTGCTAGTCAGCCCGCCTTTCCTGGGTTTTACATCTGGGTTCCACCCCTTGACTCACAGGGGCCTCAGGCAAGTTGCGTAAGATCTCAGGGCCTTGCAGGAGCCCAGAGTGCAAACACACAGGAAGCAGTTAGAGCAGGCCGGCGTTCAGCGAGCACTCAGTAACATGGGAACCAACACACCACCAACCTCAGCATCGCATCATCACCATCACCATCACCATCACCATCATCACCACCATCACCATCATCATCACCATCACCATCACCATCACCATCACCATCATCACCATCACCATCATC TCONS_00045883 . 3' 11661 TCONS_00045883 . 3' 12229 EMBV3_33915 TAGTTCCCCGACCAGGGATCAAACCCGTGCTCCCCTGCATTGGCAGTTCAGTCTTAACCA Gene BVV0102_452122 + 1 EMBV3_31395 GK000003.2:33503781-33513766 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176819 1 XLOC_106593 NonCoding TCONS_00176819 XLOC_106593 NonCoding NonCoding - 3:33510580-33511208 - TSS131578 628 2 TCONS_00176819_2 49 0.872611464968153 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00100935722864525 0 7.99073215340244e-05 0 0 0 0 0 0 0 0 0 0 0 0 XM_005225449.1 PAOX PREDICTED: Bos taurus polyamine oxidase (exo-N4-amino) (PAOX), 1e-47 194 84.32 0.288216560509554 0 noncoding 0 0 0 0 0.0357666958412259 0.79654880341634 0.083097748698563 0.213315323792427 ACAAAATTTTTAATAATTTTAAAATTATTTATCTTTCGGCCATGTGGTTATGTGGGATCTTAGTTCCCCGACCAGGGATCAAACCCGTGCTCCCCTGCATTGGCAGTTCAGTCTTAACCATTGGACAGCCAGTGAAATCCCTTAAAATATTTTAAAATTGCTTTATTGGTTTGCTGAGACTTCCTGATCCCAGATTCTTTACCGTCTGAACTACCAGGGAAGAAAAAAGTAGTTAATCTATGGTCCCTCAGTGGTGAAGAATCAGCCTGCCAATGCAGGAGACAGGGGTTCAATCCCTGGGTCAGAGATTCCCGGGAGAAGGAAATAGCAACCTACTCCAGTATTCTTGCCTGGAGAATCCTATCGACAGAGAAGCGTGGTGGGCTACACCCATAGGGTCACAAAGAATCAGACAAGACTGAAGCAACTTACCATGCATGCACTTAGACTACAATACTCTTTGATATTTTCTTATTTTTAGAATGTCATGTGTATTTAAAGGTGTGTATTCTTTTTTAATTGGAGAATTGCTTTACAGTATGGTGTTGATTTCTGCCATACATCTATTTACATAAATCGTCTATAGATATATGTATATCCCCTCCTTCTTGAACCTCCTTCCCACCTC TCONS_00172938 TCONS_00172939 . 3' 2552 TCONS_00172938 TCONS_00172939 . 3' 3179 EMBV3_40739 GAAAAAATAAAACTGCAAGCACTACTCCAAGTTCTCCAGAGGCAGCCCGTCACTAAGGGA Variant GeneID:616028|NUSAP1:NM_001046571:193_cdna 705^814 1 EMBV3_18288 GeneID:616028 10 GENE NUSAP1 MGC134490 nucleolar and spindle associated protein 1 EMBV3_00242 TGCCCAGAGCCATTGGTGGGGACACTTAAGGATATCAAAGGGGATAAGCAGAGTCACACC Gene GeneID:613305|MIF4GD:NM_001034732:20_cdna Constitutive 3 NULL GeneID:613305 19 GENE MIF4GD MGC128193 MIF4G domain containing EMBV3_23105 ATAAGCTTTTTGAAGGCAAAGAAGACTGCCAAGATGGAGACCACAGGAGCCTGGCTGCCA Gene GeneID:100336855|LOC100336855:XM_002690871:271_cdna Constitutive 0 NULL GeneID:100336855 10 GENE LOC100336855 NULL dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like EMBV3_07629 GAGGGGTGAGAGGTGTAAACAGAGACTCAAGCAAGGCTGAGCGCATTCAGATGAAACCCA Gene GeneID:509102|PIPOX:NM_001014878:82_cdna UTR3_Alt 2 NULL GeneID:509102 19 GENE PIPOX MGC137271 pipecolic acid oxidase EMBV3_20615 CGAGAAAGGCAGTCTGTGACACTCAGTTTTGGCTGTATGGAATTTGCAGTGGGGAGTATC Gene GeneID:521748|TNFSF9:XM_002688880:113_cdna UTR3_Alt 1 NULL GeneID:521748 7 GENE TNFSF9 NULL tumor necrosis factor (ligand) superfamily, member 9 EMBV3_28415 TTGAGCTCCAGACTCATGCTTCCAGAGGCCGAGTGAACTCTCTCTCAATGTGTTGCAGAT Gene GeneID:281865|IMPA1:NM_174361:9_cdna UTR3_Alt 3 NULL GeneID:281865 14 GENE IMPA1 MGC140630 inositol(myo)-1(or 4)-monophosphatase 1 EMBV3_30735 TGCGCGGGCAACTTTCGTATATAGGCCACCTGGATTTTATTAAGTGCTGAGGATGGGAGG Gene GeneID:540881|KCTD10:NM_001101216:252_cdna Constitutive 2 NULL GeneID:540881 17 GENE KCTD10 NULL potassium channel tetramerisation domain containing 10 EMBV3_38797 GATGATACCCAGGAGGCCTTTGAAGTTCCAGTGTGGCTGGATCTCTTGAAACCTATTGTC Variant GeneID:531927|FARP1:XM_002691965:15_cdna 180^284 3 EMBV3_10809 GeneID:531927 12 GENE FARP1 NULL FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) EMBV3_23383 CCCCTCCGCCCACATGCAGCACCAGATATACCACAAATACCACTGTGTCAAATGCTTTAA Gene GeneID:281133|ECE1:NM_181009:18_cdna Constitutive 0 NULL GeneID:281133 2 GENE ECE1 NULL endothelin converting enzyme 1 EMBV3_28028 ACGTGTAAACTCTGTGGCTGGCCTGGTCCATGTGGTGGGCAGTGGTGCTGCTTCATTAAA Gene GeneID:767601|BCL2L2:NM_001076533:278_cdna Constitutive 2 NULL GeneID:767601 10 GENE BCL2L2 NULL BCL2-like 2 EMBV3_08389 GTGAATTCAGAACCACAACTGTCAACGTAGTTGGAGCACCACCAACAGATGCCCCTGATA Variant GeneID:532080|EXOSC8:NM_001079606:136_cdna 141^218 1 EMBV3_22853 GeneID:532080 12 GENE EXOSC8 NULL exosome component 8 EMBV3_28996 ATGTCGTCGTGTTTGACAAGGAAAGGGACGTGTTTGTGATGTTCTATGCACCCTGGTCCC Gene GeneID:518716|PDILT:XM_002697983:49_cdna Constitutive 0 NULL GeneID:518716 25 GENE PDILT NULL protein disulfide isomerase-like, testis expressed EMBV3_01298 GATCAGACTTGGTGACGGAGAAAGTGCTGTTTCCTTGCCTGCCTTATCCGACATTTCCCT Gene GeneID:504785|RABEP1:XM_002695770:255_cdna Constitutive 0 NULL GeneID:504785 19 GENE RABEP1 NULL rabaptin, RAB GTPase binding effector protein 1 EMBV3_24121 GCCTGTTGGGACATTCTCAGCCTCCTGTATATCACATAAATGCACTGGCACAGTATTCCC Gene GeneID:614130|BAALC:NM_001083508:53_cdna Constitutive 1 NULL GeneID:614130 14 GENE BAALC MGC142796 brain and acute leukemia, cytoplasmic EMBV3_17730 GTCCCATCTCACTGGGCATTTTGTTTCAGAGAGCTTATTGGGCAGCTTCACTGATAATGC Gene GeneID:784845|PL-5283:NM_001130930:35_cdna UTR3_Alt 1 NULL GeneID:784845 4 GENE PL-5283 NULL PL-5283 protein EMBV3_09158 GGCTCCTCCTGTGCGGTGCACGACTTGATTTTCTGGCGAGATGTGAAGAAAACTGGCTTT Gene GeneID:359721|RTN3:NM_182657:491_cdna Constitutive 1 NULL GeneID:359721 29 GENE RTN3 NULL reticulon 3 EMBV3_31800 AGACATAAATGCATAGAAATGAATCCTTTTCTTGAGTGAGAAGTCAGTTTCAGATCATGG Gene GeneID:505131|C21H14orf142:NM_001166559:166_cdna Constitutive 0 NULL GeneID:505131 21 GENE C21H14orf142 NULL chromosome 14 open reading frame 142 ortholog EMBV3_08427 ATGTCCCTGTTATACTGTTGAAGTTAAAAGCCATTGCTGTGTGGGCTTGGAACCAGGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15427 GTGGTTTTGATCACTTCCTCCTGTGCAATGTTATGAACCTTTGTTGATAGTGCTTCAGGC Gene BVV0102_042207 - 1 EMBV3_28464 GK000030.2:78974556-79070548 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28950 GGGGCTCTGGAGAGTGCCTTTCAGGAGTGTGGCCATTCTGGTGCGGAGGGATGAGGTACG Variant GeneID:510238|PPM1M:XM_002697066:568_cdna 709^821 1 EMBV3_41327 GeneID:510238 22 GENE PPM1M NULL protein phosphatase 1M (PP2C domain containing) EMBV3_07068 AATGTTCTCTTTCCTCACTCACCGCTTTGGCCGGCAGGTGCCCCATCATGTCCATGTTCT Gene GeneID:512314|LOC512314:XM_002693179:148_cdna Constitutive 0 NULL GeneID:512314 15 GENE LOC512314 NULL similar to olfactory receptor, family 52, subfamily L, member 1 EMBV3_01243 ATGGTGGTACTATGCATCAATGCAAAAATCTATTCCTATGTGCTTAAGTCCACTGACTTA Gene GeneID:507990|ASPN:NM_001034309:84_cdna Constitutive 2 NULL GeneID:507990 8 GENE ASPN MGC128677 asporin EMBV3_21472 CAGCTTCCAGGAGCCAAGTCAAGAGAAGCATGGACTTGCCCAAGAAAGGCAGTAAGAGGA Gene GeneID:522347|MASP1:NM_001076968:87_cdna UTR3_Alt 2 NULL GeneID:522347 1 GENE MASP1 MGC140512 RPIB9 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) EMBV3_25258 GACGACACTGAAGGTCAATGAAACAGACTATTCATTGACTAGTACTGAAAGAACTGGCTA Gene BVT0102_420084 - 1 EMBV3_27292 GK000017.2:11764108-11830251 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076657 TCONS_00076658 1 XLOC_046887 NonCoding TCONS_00076658 XLOC_046887 NonCoding NonCoding - 17:11776048-11784780 - TSS57511 3831 1 TCONS_00076658_1 130 0.501435656486557 4 0.561676783873554 0.0010749397181531 0.00118653824830887 0.000834264024448594 0.000496830512186878 0.000840320175352026 2.22152420544967e-07 4.45683712494924e-05 0.000299321541131964 0.000314883693410196 9.0692779598233e-07 5.07992203319967e-07 0 4.85875676342528e-05 5.78598445714612e-05 4.08243326507592e-05 5.85324545265664e-06 3.67162124324939e-06 1.65923524786079e-06 0.00024086448632777 0.000813511962902543 0.0003174685523304 0 1.34809058749964e-07 0 0.000843447348636382 0.000774925159076292 0.000389803071697104 5.23292685760674e-05 0 0 XM_005205621.1 ASB15 PREDICTED: Bos taurus ankyrin repeat and SOCS box containing 15 (ASB15), transcript variant X1, mRNA. 1e-95 356 87.03 0.0754372226572696 0 noncoding 0 0 0 0 0.00398880941185941 0.981273693548939 0.0171685912647316 0.716136778509583 CTTCAACCATAAGGTAGATGTGAGAAGGTCTCTGGAGGAAAAGACATTTCCTGAAATCATTTTGTGATCTTCCTCTGGCAAAATGTTTATTTGCAAGTGAATTCAGTGGACGAGCATGGAGAACAATGAATGTGCTGGTATTACGTATGTGCCACGAATTTCTTTCTTTCAGGGATCATGTCTTTGCTGCTGCTGCTGCTAAATTGCTTCAGTCATGTCTGACTCTGTGCGACCAGCCCACTAGGCTCCTCAGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGCCACTCGGTCATGCCCGACTCTTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCGCCCAAGGGATTTTCCAGAATTCACCAGGAAGTCTACTTTGTCCAAGTCTATTCTCAAGCAGTGCTATCGCCATGGGGGGAGTACATGGAACATGGGCTGTGGCTCTGTGTGGTGTTTCTTGAGAGGCTGCTATGAAGTTTTATGAGTGGCAGTGCATGCTTGCTAAGTCGATTCAGTCATGTCCAACTCTTTGCAGCCCTATGGACCATAGCCCACAAGGCTCCTCTGTCCATAGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTACCTTGCCCTTCTCCAGCTGATCTTCCCAACCCAGAGAAACTGAAGCTGCATCTCTTATGTCTCCTGCATTGGCAGGCAGGTTCATAGCCACTAGCACCACCTGGAAAGCCCAGCAAGTGGCAGAGGGTTATGGATAAGGAGTCGTCATTATCAACAAGAACAAGAACAACCATCAGATGATCTATTGGGCATCTTTACATTCCATCTCTGTTTTTGTATCTGGGAAAATGTAAAGTTTGGAGATAGAGAATTTCTGTATTACTTGTGTGGATGTGGGATAAGCTTCTGCCCAGGAGATGGATGTGTGGTTACATGCTTCCTTTTGGGGGTGCACTGTAGTTTGTTGTTAACTAAAATATTCGGCCAATATTTTTGTCTTTGGTTCAGGCTAAGGCTTTTGGAAGGATGACTAGAGGAATGTCTACTTCAGTTGTCATCCCTAAACATTCAGCAGTGTGGTCATGTAAGTTACTACCATGTTGAATCAGCAAAACAATGCCAACTACATGAACAAGGCATAGAATTCAGATTTACTACCACTACCTGGATCAATCCTCAAGGAAATCAACCCTGAATATTCACTGGTAGGAATGATGCTGAAGTTGAAGCTCCAATACTTTGGCCACTTGATGTGAAGAACTGACTCATTAGAAAGGACCCTGATGCTGGGCAAGATAGAAGGCAGGAGGAGAAGGGGATGACAGAGGAGGAGATGGTTGGATGGCATCACTGACTCAATAGACATATTGAGCAAGCTCCGGGATATGGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCTATGGGGTCACGAAGAGTCAGACATAACTGAGCAACTGGACAACAGCAACGTGGATATTCACTTTCAAACAGATTACATTCCATTTGTAGTTCGTGATGAAAAAAAATCTCTGTAGATTCTAAATGTTGAGAGTCTATCCATCTGTTGAAGTATAAATGTAAATGTTATTGCCAGAGTGAAATGCACCAATACTTAATGATTGTAGAAATTAAAATTATTAGAATAATCAAAATATTTCAAATAATAAATGTATAAGGAAATAGATCCAAAGTAAAGATTAATATTAAGATAGAACATGTTAGCTAGATAACTTTAGAAAGAATATTATATCATTTTAGAGCCAGTGAATATTTATAGAATTTAAATAGTACAAGAAAGAATAATAGAAATCATAGCACAGAGATTAGAATTAATCTTTGAAGTTGTATTACTATTCAAATATTAATGAAAATAATCTTTAAAACTATTCTTATTGTACAGTATTTTTTAGTTATTTAATTCTGTTTAGGCCATGAGTCATTCAGGAAAAAATTCTCTTTAGAAATTCTTCGTATCTTGAAGGATGGATAAAAAGTAAAATGTTAAGTTTGACCTATTCAATTTGATAAGGTGGGAAAACAACCCAAATCAGGTACACTATCTGTATTAAACCATCTTTGATCTAGACATAACAAAGAATATACAGAAAGGGAGACAGCGTTAACCAAAAAAGAAGAACTCCTAAATGTGCCCCTCTATCAAACTCAGTTGAAAGAATGAATCTATTTAGTTTCACACATGATGTGTATGGTGAACACAGGAGCAACCCATCAGCTGACAGTTTCAAGGAATTGTTCTTCTTATGTTAAATTTTAAATAATTTACTAGTGGTTTTAATGAAAAATTTTAGTAAAAACTACTTTGGGGGCAAAAATCCGAAGATTCTGACATCTAAGAAATTCAGTCTATGGTGGTGACCTAAGGGTTTGGTCTTAGATTTGGCTGAATATTGATTTTAACATTTGTTTATTTTGTGTTACCACATAATTTGGTGCATATCTACTTTTTTTTTAGAGCACTACACCTTCCCTGCTTTATAATAATAATAATAAAAAAAGAGTGAGCTCATAGTGCTACTAATGAGATAGGACATCTTTCCTCTGTGTTTTTCTTTGTTATTGATTCACTTTGTGATTTTTTTTCTTCTCTGAAATGTTTGTTTTTGTTCATTTTCTTTTTGTTTCATTTTTGTTCATTTCTTAGGAGGTGATAGTTATCTTTTGTTTTCTTACAGCTTTGTAAGAGTTCTTCAATTTTGTTTATCTGTGTTTTATCATTCATTTTGTAGCTTTTGTTTCTCCACTCCTTTTTTGATGAACAGAAATTTAAATTTTATTTGTCAATTTTATTGGTATATTTTGTTTGAAAAGTTCTTTCCTAACATGAGGTTACAAAGGTATTCACCTATATTTTTTTTCTAAAAGTTCTGAAGTTTTGCCCTTCATATTTAAATCTTAAATCAGTTCAAAATTTCATTTTTTGTGTGTCTGTATTATGACAAGGATCACATTTTATTTCCATTTGAATAGCCAGTTCTTTCAGTACTAGTCAATGAATAGTCTGTTTCATTGACCTTCAGTGTCGTCTCTGGCATAAATCAAGCTCCGATCTGTGTGTGGGTCTGCTTTTGACCTCTCTTCCACTGATCAATTTATTTATTCATGTACAATTACTAAATTTTAAAACTACCATGGATTTATAATGTCTTGATTTTGGTGCAAAATGTGTGTTCCTAACTTGTTCTCTTTCTCCTTCAACAGTATCTCAACTATTTGTATGCTTTGCTTCTCCTTATAAATTTAAAAGTTCGATCGTCAATTTATTTGAAATTTTTGTTTCTTGAAGTAAACTTTACACACCATAAAACACAGAATTTTAATGTACAATTCAATGAGTTTTGAAAAATGTATAACCGAAAGTGTACAAGTGTATTGTTCAGTTGCTAAGTTGTATCTAACTTTTTTGCAACCTCATGGACTGTAGTCCCCCAGGTTCCTCTGTCCATGGGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTGCCTCCTCCAAGGGATCTTCCCCACCCAGGGGTTGAACTTTGCATCTCTGGCATCTTTAACATTGGCAGATGGGTTTTTTACCACTGAGCCACCTGGGAAGCCACAGAACCATATATAGCCAGTAGCCAATCAAGAAGTAGAATGATTCTCTCACCTCAGAAAGTTCCCTTATGATCCCTTTCAGTTCCTCTCTACTTGCCAGAAGCAAGCACTGTCTGGTTTTCTGTTATCATTAGTTTTGTGTGTTGTTGGAATCTTAAATAAATTCATTTGGTATGTATTC TCONS_00074837 r 3' 24238 TCONS_00074837 r 3' 27655 EMBV3_17800 TCGCCTACCTGGACTGCGCGCTGCACACGGACATGGCCGACATCGAGCAGTACTACATGA Gene GeneID:614317|LOC614317:XM_002688440:78_cdna Constitutive 0 NULL GeneID:614317 6 GENE LOC614317 NULL similar to RIKEN cDNA 1110038O08 EMBV3_37803 CTACCCAACATGTCACGAGTCAGCCCCTACCCTCGGGCTTGTCTCAGCATCTGGAAACAA Gene BVT0102_368887 + 0 NULL GK000007.2:17865099-17868240 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212170 TCONS_00212175 TCONS_00212174 1 XLOC_130106 Coding TCONS_00212174 XLOC_130106 Coding Coding EVI5L 7:17832595-17867011 j TSS159272 5737 1 TCONS_00212174_3 796 19 0.833851518233328 0.00033019500661629 0.00016366533826732 6.53306988887254e-08 0.00023454813795617 0.000143136685171977 0.000117612519167035 4.32041686049644e-07 0.000257283562715101 1.96682218415801e-07 0.000102143816260722 1.69602260106341e-05 2.04319238792355e-05 6.38237352095384e-05 5.5429853374999e-05 2.37555604669393e-06 5.20137204630049e-11 7.87159835106322e-06 1.26771818737381e-09 0.000295417444135574 0.000115678460730837 0.000244938563387169 4.01531061815303e-18 3.23973422170829e-16 1.11183005918972e-05 2.24640169271968e-22 0.000327544464717745 3.14854938968196e-05 1.56538498900131e-09 2.52677680263222e-05 8.31597092797568e-11 XM_005208766.1 EVI5L PREDICTED: Bos taurus ecotropic viral integration site 5-like (EVI5L), transcript variant X2, mRNA. 0.0 6891 99.90 0.667073383301377 NM_145245.3 EVI5L Homo sapiens ecotropic viral integration site 5-like (EVI5L), 0.0 4069 83.54 0.655743419905874 TCONS_00212174_3 sp|Q96CN4|EVI5L_HUMAN EVI5L_HUMAN EVI5-like protein; 0.0 1536 98.24 0.998743718592965 1 coding 0 0 0 0 -0.347183691481122 0.100361584728865 -0.0673292103159547 0.253724275004745 AGCGGGTGAAATGGCAGCGGCGGAGCCGGCGGCGACCGCGGTCCCGGGGGGCGGCTGAGGGGGCCGGGCCGGGCCGGGGCTGCGGGGCGAGCGACACGGCGGGGATCCGGCGGCGCGGCCCGGGACGGCGACACTCGGCATGGCGATGGCGCGCTCTTTACAGTTCTGTGACCTGACCCTGCTCACAGCGGAGGAGCCTGACCGCCATGGCGAGCCCCACTCTGAGCCCCGACTCCTCATCCCAGGAGGCCCTGTCAGCCCCCACCTGCTCCCCCACCTCTGACTCCGAGAACCTCAGCCCCGATGAGCTGGAGCTGCTGGCCAAGCTTGAAGAGCAGAACCGGCTGCTGGAGGCCGACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGCGGAACAGTGGCTCCTCGCTGGTGTCCAGCTCCTCAGCCTCCTCCAACCTGAGCCACCTGGAGGAGGACACGTGGATTCTGTGGGGCCGGATAGCCAACGAGTGGGAGGAGTGGCGACGCCGGAAGGAGAAGCTGCTGAAGGAGCTGATCCGCAAGGGCATCCCACACCACTTCCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGCCACAGACATGCCGGTTAAGAACCAGTACTCAGAGCTGCTCAAGATGTCGTCCCCCTGCGAGAAGCTCATCCGCAGGGACATCGCCCGCACCTACCCAGAGCACGAGTTCTTCAAGGGCCAGGACAGCCTAGGCCAGGAGGTCCTCTTCAATGTCATGAAGGCCTACTCGCTGGTGGACCGGGAGGTGGGCTACTGCCAGGGCAGTGCCTTCATCGTGGGCCTGCTGCTCATGCAGATGCCCGAGGAGGAGGCCTTCTGTGTGTTCGTGCGGCTGATGCAGGAGTACCGCCTACGAGAGCTCTTCAAGCCCAGCATGGCCGAGCTGGGGCTCTGCATCTACCAATTTGAATACATGCTACAGGAGCAGCTCCCGGACCTGAACACCCACTTCCGCTCCCAGAGCTTCCACACGTCCATGTATGCCTCGTCCTGGTTCCTCACACTCTTCCTCACCACCTTCCCACTGCCCGTTGCCACCCGTGTCTTTGACATCTTCATGTACGAGGGCCTGGAGATCATCTTCCGGGTGGGCCTCGCCCTGCTGCAGGTGAACCAGACGGAGCTGATGCAGCTGGACATGGAGGGGATGTCCCAGTACTTCCAGAGAGTGATCCCCCATCAGTTCGACAGCTGTCCAGATAAGCTGATCCTCAAGGCTTACCAGGTCAAGTACAACCCCAAGAAGATGAAGAGGCTGGAGAAGGAGTATGCGGCCATGAAGAGCAAGGAGATGGAGGAGCAGATTGAGATCAAGAGGCTTCGGACGGAGAACCGGCTCCTGAAGCAGCGGATCGAGACCCTGGAAAAGGGGCAGGTGACACGCGCACAGGAGGCAGAGGAGAACTACGTCATCAAGCGGGAACTGGCTGTGGTGAGGCAGCAGTGTAGCTCGGCAGCCGAAGACCTGCAGAAGGCGCAGAGCACCATACGGCAGCTGCAGGAGCAGCAGGATAACCCGCGCCTCACCGAGGACTTTGTGGCCCACCTGGAGACGGAGCTGGAGCAGTCACGGCTTCGGGAGACCGAGACCCTGGGGGCCCTTCGGGAGATGCAGGACAAGGTTCTGGACATGGAGAAGAGGAACAACTCGCTGCCCGACGAGAACAACGTGGCTCGGCTTCAGGAGGAGCTGAAGGCGCTCAAGGTTCGGGAGGGTGAGGCAGTGGCCTCGGCACGGGAGCTGAAGCTGCAGCTGCAGGAGCTCTCGGACACCTGGCAGGCCCACCTGTCCCGCGGTGGCCGCTGGAAGGAGTCCCCGCGGAAGCTGGTCCTGGGCGAGCTGCAGGACGAGCTGATGAGCGTGCGGCTGCGAGAGGCCCAGGCGCTGGCCGAGGGTCGAGAGCTGCGGCAGCGCGTAGTGGAGCTCGAGACGCAGGACCACATCCACCGCAACCTGCTGAACCGTGTGGAGGCTGAGCGCGCGGCGCTGCAAGAGAAGCTGCAGTACCTGGCGGCACAGAACAAGGGGCTGCAGACGCAGCTCAGCGAGAGCCGCCGCAAGCAGGCTGAGGCTGAGTGCAAGAGCAAGGAGGAGGTGATGGCCGTGCGCCTGCGGGAGGCGGACAGCATGGCGGCGGTGGCCGAGATGCGGCAGCGCATTGCGGAGCTGGAGATCCAGAGAGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGACTCGTCGCAGTACATCCGCGAGCTCAAGGACCAGATCGAGGAGCTGAAGGCCGAGGTGCGGCTGCTGAAGGGCCCGCCGCCCTTTGAGGACCCGCTGGCCTTCGACGGGCTGGGCCTGGCGCGGCACCTGGACGAGGACTCGCTACCGTCGTCCGACGAGGAGCTGCTGGGCGTGGGCGTGGGCGTTGGCGCCGCGCTGCAGGACGCGCTCTACCCGCTGTCCCCGCGCGACGCGCGCTTCTTCCGCCGGCTGGAGCGGCCGGCCAAGGACAGTGAGGGCAGCTCCGACAGCGACGCCGATGAGCTGGCCGCGCCCTACAGCCAGGGCCTGGACAACTGAGGCCGTGCCACGCGTGCTCGGAGCCAGGGCGCGGGGGTAAGGGGGTAGGCCGCCGCCAGCCCGCTCCTGCGTCGGCGCCAGCTTTTCACAGACTCCACGCCCTCGGCAGTTTCACCCACCCAGAGGGCCAGGCCCAGCGCACAACCGGGCACAGAGGGCAGGGCCGGAGGCTGGGGATCCTCACAGTGCCCTGGCAGACCCACCCTCCCCAGCAGTGTTTACCCATCTTGGTCCGTTCCCTTCTCGGCCCATTTACCTGGAAGGTCTGCCCCTCTTAACAGCCAGGGCCAGGACGACCCAAGGGTCCCAGGACTGCACCAACGGAAGCTGCCCCTCCTAGCCGGCCTCCTCCTGGGACAAGAGCGGCCCTGCTGGGAAGGGCCCAGGCTCTGGGGCAGGCCTGAGGAGGAAGGTGCCCCTGTAGGCCGGACTTTACCACCCATGAAGGCCCTGGGGATCCTTGGCCTCTGGAGACAGATGGCCAGGCAGGGCTTCCCTGCCTGGTTGCAGGCATTGTGGCCCCTGCAACAGAAACCAAAGTCCCTCCTACTGAGTGCAGGGCTGCCAGGGTGTGAGTGGCCAACTGGAACCAGCCAGGGCCTGGGCAGTATCTGTCCCTACTTCCTAGGGGCCAGAGCAGCTGTAAGGAAGTGGAGACACCTCCCCTTCCCCAGCACCCCACCTCTTCCTCTGTGGCAGTCCCATCACCCCAGCTTGGCCAGTGACGGGGGGAGAGGGGCTCCTCATGCAGGCTAGCCTCCTCTCCAGGGGGTCCCCAGCCTCCAAGTCCCTTCCTCCTCTGTATCCCTAGCCCCACCATCCAGCCCCAGGGGAGGAGGCCTCCTGGCTGAGTGCCCCCCCTACCTGCTCACAGTGGTCCCGTGGTCTCTGCTGAGTCAGAGCCAAGAACGGTGCCAAAGTCCAACGATGCCCCCAGACCCGACCCCCCCCGGGACCTCATGACCCCCGGGCTGACCTTCTCGGTGCTCCTGGAGCCTAGAACAGCATCACAAAGAGTCCCCCTGGCGCTTCCTGGGGTGGGGATCCATGCTCAGTCCCCCCTTTCCGGTCGCCCACTCAGTGTTACAAAGCCTGGGGACCAGGGTGGGCATCCCAGGGGCTCACCCACATGCCCCCCGCACTGCCCACCACCATTTTGCACACTGCCTGTTCACACTCCACATGTCGCCCAGGCGGGAAAGATGGAAAATAAAGTGTATTTACACAGTCACGACAAGGGGCGCTGAGCGGGGCAGGCCTGGGGGTCCCTGGCCCCTTGTGAAGCAGCGGGGAAGGGAGGAGGCTGTCTATGCCCTTGGGAGCCTCCCACTGTCTAAGAGAACCAGAGGCACAGGTCACAGCAGGCCAGCAGGGGCCCAAAGAGGCTGCCCAGGACGGGGTGCAGAGTGGAAGAGCAAAGTTCACACCATGCATGTGAACATTAAGTGTGGGGGTAGGAAGAGATAGGTTGGTATTGGAGGAACAGGTCAGATGCACCCTTAGAGCAGGCATTTTCAGGAGGATGGCTCTGGACATGGGGAGAGTGGGCCATGATTTTCCACCAGGGCAATTCAGCCAGGGCCTCCCTTGAGAGTCATGAAGAATGAAGGGGCTTGGGCTTGGGGCCTCAGGAGGATTCAGGATCTACTTTCCTCCATTCGGCATGTACTTCCTGAGGCCTTTAGGGTTTTCTGCTCTGATTCTGGTTCTGAGGGGTCCCAAGTGCAGTGGAGGAGACAGACACTGGGGGGGCGCGGTGAGGGATAAGTCTGCGCTAAGAATGGTGAGTGCCTAGATGAATGTGTAGGGAGATCAGGGAAGGTTTCTTGGAGGAGGTGGGGGTGGGGGGAGTGCATCTCCAAGGGCAGAAGCATAAGGGTGAGATGTGGAGGGATCAGCAGGAGACATGTGAGATCTGTGAAGAAGGAACAGGAGAAAGTGGGCATGGCCAGACTGGGAAGGGGGTTTTCAAGTCAGGAGAAGAAAGACTTTGCACTTTGAACTGAGGGTACTGGGGAGCCATGGAGGGCTTAGGTGAGAGGGGCACCATCAGAGGGACTACAGTCTTGGGGGTCAGCACAGAGACAAAACTGAGCCAGGCAGTGGGGACTGCCCTGGGGAAAGAAGACCCAGAAAGGCAGGTCTTTTGTAGGATTGCCCACAGAGCTGAGGCGTAGTCCCAGCTAGCACAGGAGTCAGATCCAGGGATGGCAAAGAAGGCTTCCTGGGGGAGACATTTAACTGGGTCCAGCCAGATACCAGCCTGGCCCTGACCTCTACGCCCGGTGTGGACCCACAAAGTGTGCCCTGCTCTGCTGCATGATACCTGCGGAGCAGCGAGCAGGACACCTGTCATGCACCGGGACAGCTGAGCCCTTCTCACACCACAGCTCCTGTGGACCCATCATCATCCCCACCACACAGTTTGAACACTGAGACCTTGACCGTTGCTGCCTGCCTCTCCTGCTCCCACCAAGTAACTCCACCCGGTTAGCTCCCAGGATGGGGCAGGAAGTTGGGAGAACTGGGGCTCTGCCCTGCTCCTTCTCGAGGGCTGGCCTTGGGGTCTCAGCTACCCAACATGTCACGAGTCAGCCCCTACCCTCGGGCTTGTCTCAGCATCTGGAAACAAGGACACCCGGGTCCTCACCAGGGCCCAGCTTAGAAAAGGAAGCTCTGTAGTTTGTCACCTTAACTGATTGGCTCCCAGGGATGGAGGTGACAGTATCCCATCAAGACTGGGCCAATTTCTCTTCAGATCCTAGGTTGGGAGGCAGTTGCTTCTGGAGTGGGGACCAGCAGGAACCCAGCTTCAGGGACTGGGTCTATAGACAGAGAAATAGCCCCACAGGGGGTCCTTCTCTGTCCATCTACCTGTCCTGAGGATTGTGGTTCCCCTCCGGCCGCCATCATTTTGGGTGTAAAGCAGGACACTCTTGGGGAGGAAAGGCCTAGGGGATCCATTTCCTGCACGGGTACTTGGGAAGAAAGAGGGCCTGGGCTGTGGCTTAAAGGAGCTACAGTCAGGATGACTGGACTCTGGGAGGAAGGGCAAGGAATTCTGACTCGGGGAGATAAGCAAAGGCAGTAGTTGGCTCTGGCGAGGACCCTCGACACTGGTGCACAGGCAAGGATGCCCG EMBV3_31936 AAAGCCAAGGCTGTGAAACCAAAAGGGGCCAAAGTGAAGGTAACCAAGCCAAAGACCGCT Gene GeneID:618164|LOC618164:XM_002697530:273_cdna Constitutive 0 NULL GeneID:618164 23 GENE LOC618164 NULL similar to Histone H1.1 EMBV3_31866 GAAGCAGCAGTGGAAATACTGTGAAACCAACGAGTACGGGGGAAACTCTTTCAGCAAGCC Gene GeneID:522297|ELSPBP1:XM_002695109:583_cdna Constitutive 0 NULL GeneID:522297 18 GENE ELSPBP1 NULL epididymal sperm binding protein 1 EMBV3_25769 CGATATGTCGGAGGAGATGCAACAGGACTCGGTGGAGTGTGCTACTCAGGCATTGGAAAA Gene GeneID:404151|DYNLL1:NM_001003901:42_cdna Constitutive 0 NULL GeneID:404151 17 GENE DYNLL1 CDLC2 DNCL1 dynein, light chain, LC8-type 1 EMBV3_28606 CTTTCCAGAGTCCGGTGCAGAGGCCTCCCGATATGCAGATACATTATTTAAGTCCTCTGA Variant GeneID:532586|DEPDC7:XM_002693496:146_cdna 123^513 1 EMBV3_34114 GeneID:532586 15 GENE DEPDC7 NULL DEP domain containing 7 EMBV3_27341 CTATATAATAATTCCTTCATTTAGTCTGTGTTTTACCTTAATACTCTTTTGTATGATTTA Gene BVV0102_407960 + 1 EMBV3_28379 GK000019.2:19952303-20014788 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20994 TTCTCACTCTCTCCTTTTCTTTGCTGGTAGCATGGGGGTGTCAGGAAGGACCCACGGAAA Gene BVV0102_109815 + 0 NULL GK000008.2:107656815-108828898 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229053 TCONS_00229057 TCONS_00229055 TCONS_00229052 TCONS_00229056 TCONS_00229054 1 XLOC_138644 NonCoding TCONS_00229052 XLOC_138644 NonCoding NonCoding - 8:108443912-108445960 - TSS170616 1187 1 TCONS_00229052_2 188 3 0.421592574499267 0.00372520858698521 0.00343355337742547 0.00356699021133797 0.000948981433543348 0.000369097187576355 0.000156306920610317 8.69543807862969e-05 0.000126909063955865 0.000276354323661726 1.99007221456217e-05 0 3.63502454203059e-05 5.80135787082469e-05 0.000939196535483248 0.000947060061174571 0 0 0 0.00089462536013353 0.00177117794497032 0.000419569379925598 0 0 0 0.000894258834545729 0.000616387186875439 0.00112998335054606 0 0 0 0 noncoding 0 0 0 0 -0.0340337079931819 0.824977143624773 0.0319844980186672 0.52475185364058 AGTCTGTGATGCTGTGAGCTCAAAACTGATGGTCATGGGACCAGTCTTCACGGCTCCTCTCAAAGAAGCCACTGCTATTCTCCATCATTCTCTCTCCCCAGCATGTTCACACCAGCCCACGGCAGCCAACGTCTAGTTTACAGCCAGGCAAGGAGGTGAGAAGCAGGAGGCTTTGCCTGCCAGAGGCCTAGTCAAAACTACCGCTGGACTTGCTGTAAATTAAAATTATTGAATGATCTTGCAGCCTGAAGGCCCCATTCAGGAAAATGATGGAGCTCTGGATCACAAAAGCTTGCAGAGCTGTGCTGTCAAGCTGGCTGGGCCTCCTGACCCCCCAAAACAGCAAATCTGGACGGTCTTGACTCAACCTGGGCCTCTGAGAGCTAAAATGGATCCTCCTCTCACCCTGCCCCAGCACTCTCTCCATAACAAGAAATCCGTACAGAAAGCCCAGCTTATTCTATTTGGTTTTTCTTCCTACTTAATGACTGGTATCAACCGTCAGGATCAAACCAGAAACCAGAAAGGGCAGACAGCCTCAATGCCTCTGGTCCCTTCCCCCAAATGCCTGCCAAATAGTTGTGTGGTGCCTTGCTTGAAGGCTTCCTCCCATGAGAACCCTGTCATCACTAAAGGCCGATCAGCTTCCTGCAAGGAGCATCCTTTCGGGACAATGCTTCAGGACACTGCCAGATCTACTTACGCAGATCCTTTTAAAGACACACTGCTGGATGGTTTTCCTTCTCGAGACACCCTCCCCCAAAGACAGAGCAATATTCCTCACCTGTGTGATTTATAACACAAGCAAATTAGTAACAGATGCTGGCAGTGAGCGGTTTACTCCGTTTTATCTCTTTTCCCCCTTTCACTGAATCAAGGCTGGTGGTAAACAGTCCAGCCCGGCCACTATCAAGCACAGGAAGAAGGATGCCATTTCCCTGCCAGTGGGCATGAAAGCTAAATCCACAGGCACACTCTGGGGCTGCCTGGGGGCTGAGGAGAACTGCGTGATACGCCTGTTCACCTCAGAAGCCCTGCACTGACAGTTGTCCCTGTTCGAATTCCTTCTTTCCGTGGGTCCTTCCTGACACCCCCATGCTACCAGCAAAGAAAAGGAGAGAGTGAGAAGCAAGAGAAGTTAAGTCAGACTTACAGAGCAGATCAGGGCACTTCAAGTTCATAGAATC TCONS_00229037 s 5' 132798 TCONS_00229037 s 5' 133349 EMBV3_07057 CTTGAGCTAAACACTACACCCTCTGCTCCCTCCACTCACACATTCTCACTGTTTACTGCC Gene GeneID:100295476|LOC100295476:XM_002688367:201_cdna Constitutive 0 NULL GeneID:100295476 6 GENE LOC100295476 NULL similar to epiregulin preproprotein EMBV3_15007 TGTTGTCTTAGTTCCTGAAGTGGACAGGCAGGGACTGGGCAAACTGGACATCTGTGCTCT Gene BVT0102_115794 + 0 NULL GK000019.2:28435113-28443495 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096207 1 XLOC_057914 Coding TCONS_00096207 XLOC_057914 Coding Coding C19H17orf59 19:28441866-28445326 o TSS71541 3460 1 TCONS_00096207_3 353 1 0 0.000173020260479841 4.06583717348697e-05 0.000264781765444001 0.000585610463520208 0.000178366923127893 6.71989867665497e-05 0 4.10269764300069e-05 3.8766601622698e-05 1.59942931720628e-11 1.56511007641649e-06 3.04710184786331e-05 3.43165715662597e-06 0.000121270998622899 5.33179274100764e-11 7.82579370023773e-05 8.46728568719912e-11 1.47595925491931e-05 4.07419323380001e-11 2.63642195978547e-11 9.8704961084148e-07 2.27096847257072e-05 1.10954032790324e-05 2.94659095051038e-05 6.40784341468463e-05 2.72112435588123e-11 4.23348312816298e-05 3.34384489123257e-11 2.90219344847114e-06 2.34065735414649e-11 NM_001040565.1 C19H17orf59 Bos taurus chromosome 19 open reading frame, human C17orf59 (C19H17orf59), mRNA. 0.0 3303 100.00 0.528901734104046 NM_017622.2 C17orf59 Homo sapiens chromosome 17 open reading frame 59 (C17orf59), mRNA. 0.0 1929 83.19 0.53092485549133 TCONS_00096207_3 sp|Q3SX20|CQ059_BOVIN CQ059_BOVIN Uncharacterized protein C17orf59 homolog; 0.0 694 100.00 0.997167138810198 1 coding 0 0 0 0 -0.084234186202493 0.691596591261742 0.0505842360157623 0.302361140206927 CAAGGCCTCCCAAGCCGGGGCGAACCAATTCCTCGGTTCCTGCCCCCAACTGCAGTATGGAGTCGCCCCGGGGGCGGCCTGGGCCCGAGACGGACCTGCTAGCTCTGGGGGAACAGCAAGCTGCGATCTTCGGCGACGGCCCGGGCCAAACGCCCTCTGAGAGGCCCTCAGACCTCCGACTATCCGAGGACGAAGAGGCAGAGAACGTTGGGGGCGCGAGCTGCCACCCCAAGGCGTCCCTGAAGACTTCGAGCTGCAGCTTTGTCCACCCTCCGGAATGGGAAGCTCCGGAGGACAAGCCGGGCCGTGGAGGGACGTTTTCTGGGGCAGGAAGCCGCCTGGGGGCGCCGGATCCCGAATTCGACCTGCACGGGTCCTCCCGGCGCAAGGACCCTGAGCCTCCGGAGGCCAAGCCTGAATCCGAGAGGGTCTGCCGTCGAGGGAGCCCTGTAGGCGGCGGGATGGATGTTGAGCAGAAGGAAGACGACAACGAGGCGGCGGAAGCCGGCAGGGGTGGCCGTTCGTTCTCCAGCCGCCTTCAGGACAGCCGCAGCTTGGACGGGTTGAGCGGGGCGTGCGGCGGCCCCGCGTCTTCAGGGGGTGCAGAATCTGGCGCAGGCGGCGGGCGGCGCGCCACTATCTCCAGCCCCCTGGAGCTCGAAGGGACGGTGAGCCGCCATGGCGACCTCACCCACTTTGTCGCCAACAACCTGCAACTCAAGATCCGTCTGAGCGGCGCCCCTCAACCTCCGCCCCCTGCCCCTACGCGGCCCTGTTCAGCTCCCACACCCACTCCGGCCATCCCTCCCATCGACCCCGACGTGCTGCGGGACCTGGAGCGGCTGAGTCGGGAGCTGGGCGGCAGGGTGGACCGTCTGCTTCGCGGGCTGGGAGGTGCGGTGCAGGAGCTGACAGCTCTGAGCGTGGGCTGCATCCAAACCTACCGTGATGCAGTGGACTCTCTAGGGGAAGCTGTGGACATGAGCATCAAGGGCATGTACACCCTGCTGGCGCGCTGTGAAGAACTGGAGCGGGCTCTGCAACCGGTTCAGGGACTGGCGCGCCAAGTCCGGGATATCCGACGCACCTTGGAGGTGTTGGAGGCCCTGTGCAAGTGACTGGGAAGGCAGGAGAGGCCTGGCAACGCCAGGGACCAGCAGGATCCTTAAGGACTCTTCAAGGAGCCCTGGTGGGACCCGCCTGCTGAGAGGAGGGAGGCCTATATATGGGAGGTTCTTCCAGATACGTTTAGCTTGCCGGCGACCATTCGCTGGGCCTTATGCAGGTGTGTATCGGGAAGTTCTAAAGGCTCTCCTGGTAGGAGGGTATGATGCTCTGCTTCTGTTCAGTTGGCCATCTGCAGCTACCTTGTTCTCCCAACTCTCTTTAGAGCACCATCTCTGGAAACCCGGGGCTTTAGGTCTGGGCTTGGGAGATGTGACTGTCGTATGTTATCAAGAAAGGAGAACAGAGGAGACCCCAGCCCCCACTGTGGCCACTCTGACCTCCAGTAGTCACATCTCAGGTGCCAGGGGCTGTGGGAGCTTGTGTGGTCAAAGACCACACACCACGCAGACAAGGACGCATACTTGCAGATGGATAACCTCCTGCTTCTGCCCTCTCGCCCTCTACCATCCCATTTCCCCAGTCATAACCTGGGCGGAGCTAGAAGGAATGTATTGCATGGTAGAGGAGGTGCGTTGGGAGGGGTCTCTCTGCTCTCAGGGTTCAGATAGAATTGTTGCTGGTTTTGAAGCCCACCTGTTGTGGAATGTTCTAATCAGTTTTGGCTTTCTGAGTTTTTGTGGAATTAAAGTGCTGCTGCTGCTAAGGCTGAGGCTGTGTCTGTGTGGGGTTACAGGGATTGATGAACCAAAGTAATGGGAATGAGGGTCAGTCTTTTCGTGGAGTTTTCTTGGGGCTGGTGCTGGGAGTGGGGTGGGGGTCTCAGGCCACATATGGAAGGATATGGTTCCTACTCATAAACAGCAGATCTGAGGAAAGGTAAGACACAGGTATGGGCTGAGAGATGTGTAAAAGCAGACTCAGAAGCAAGGAGATCTAGAAGAAAAAAGGAAGGAAGTGTTGTCTTAGTTCCTGAAGTGGACAGGCAGGGACTGGGCAAACTGGACATCTGTGCTCTAAAGACTAGAAACACTTGCTAGCTCCATTCTTGACCCCATTTCTCACACTGTGCCAATTCCTGGCCGCCTTCCGTTTACAGTCACATAGTAAATTCCAGAAGCTCCCGTTATGTGAGATTCAGAAACAGATCACAATACGGATCCAGTTCCGTTAAACTATCCTCCTGTAACTCAAGACACTAGGTCTTTGGGCTGAATTTAAACACGTTATTCCTCGCCTCGAGGTGTGAACAGTTCCGGAATTGGAGATGTTGCTCCACACACCTTCCTTAACAACAAAAAATTGACAGTAAATTATTTAAAAGAAGACGATACTCTGGCCCGTACGGGGCTCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGGCCAGTCGACAAGAGGCTTTCTCAATATCAATCTATGTAAAATACAAATTACTCATCAGTCCTATCTGTGAGAAAATCTCAAAATGGGTAAGCTTATTTAGAAAAACAGGGAAAGAGACTACGAAAACGGAATCACTTATCATTTCGGGAAATAAAAGCGAAGCCAAAATAGTGGCAAGCACAGATAATGCAAATACGTGCTTGACTGGCAGGTCGCCGTGCCAACATAGAGCGCAAGACTGACAGCATGCACTTAGCGTTGAGGTGCACAACCGGAAATAGAAAAGGCCGTCTGGTGGCCACCGGTAGACTCCCGAAGAGATGTGGAAAATTATATATAAGCCAGAAGCCTACGACTCTTTGCTCGAAGTGTAAAAACAACCCATGCCTCGGGAGGCACCGCTGGGATTCGAACCCAGGATCTCCTGTTTACTAGACAGGCGCTTTAACCAACTAAGCCACGGCGCCCCGCGCAACCGCTTCCCCGCCTCGTTTCCCTGGCCAGGTCAGTTCCAGGTTAGGTGAATGAATGCCGGGATACCTTTCTAATTTTCGGTCGTACTGGAAAACAAGGTAGAAGGTGCGAAATCCGCGGCTGTAAAACGGGATAGGTTGAAAGGATGACACAGAAATTGAATCCTGGCACACAGAAGGTTATAAAATATAAAGACAGCTGCGGAATCGCAGGCCGACGAGGATGGGATTCGAACCCACGCGTGCAGAGCACAATGGATTAGCAGTCCATCGCCTTAACCACTCGGCCACCTCGTCCACAGGAAAGCAGCTTAGGATCTCCTCTCTGGGGTCTGGATTCTTCCTTCTCGGAGAAAGCGTGAACCTAACTACGTCGCGTAGGGATGGTGTCCCGAGGGATCCCGCCCGGCACCGCGAGGACGACTCGCAGGGCTCTGGCTGCCGAGCGATATCC TCONS_00096208 s 5' 0 TCONS_00096208 s 5' 0 EMBV3_15917 TGGAGCATTGCCTCAAACATGGGCTGAGAGTGAGTTCTATGAGCCTGAGGCATTAATGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29232 CACCAAGCTGGACCCCGAGGGCAAGTCCGCGTTACAACGCCCTCCACCTGGCCGCTAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43231 ACTGGATTCGCTGTCAGTGGAAACGCTACCTCAGTGGCAACCAATAGGGACTGAGCTTCA Gene GeneID:512021|ARHGEF15:XM_002695871:366_cdna Constitutive 0 NULL GeneID:512021 19 GENE ARHGEF15 NULL Rho guanine nucleotide exchange factor (GEF) 15 EMBV3_39435 ATGAAGATGTTGTCAGGAGGCATTATGTGGGGGAACTCTACAACTACGGAGCTGACCACC Gene GeneID:539227|RAB3GAP2:XM_002694004:311_cdna UTR3_Alt 2 NULL GeneID:539227 16 GENE RAB3GAP2 NULL RAB3 GTPase activating protein subunit 2 (non-catalytic) EMBV3_27696 CTACAACTTTAGAGGCATCTCCTACTCCAACGTGACTGCGGTCCAAGCCTCCAACAATGA Gene GeneID:786236|LOC786236:XM_002692273:1608_cdna Constitutive 0 NULL GeneID:786236 13 GENE LOC786236 SIRPG similar to NSFL1 (p97) cofactor (p47) EMBV3_10774 CTTGTTTCCAGTGTCTTCCTCTCTGTGTTTACAGCATAGCAGGTGCTGCTGATGAAGAGA Gene GeneID:512666|AVEN:XM_002690780:569_cdna Constitutive 0 NULL GeneID:512666 10 GENE AVEN NULL apoptosis, caspase activation inhibitor EMBV3_27931 ATTTGGAGGAACTCAACAGGTGGTACAAGGTCAGCCAGCTAGTTAGGGAAAGAGTCCTGG Gene BVT0101_077058 + 0 NULL GK000002.2:27078835-27116744 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16540 CATTGCAACAGGAGAAGCCTCCACGCCGCAACAAAGACCCAGAACAGCCCAAAAATGCAT Gene BVV0102_453182 + 0 NULL GK000014.2:75673012-75708344 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052339 1 XLOC_031432 Coding TCONS_00052339 XLOC_031432 NonCoding Coding LOC100848906 14:75673227-75679074 = TSS38842 5739 4 TCONS_00052339_3 124 0.354242899459836 2 0.018645227505987 0.000175487674418721 0.000125333725714333 7.91453823063626e-05 5.22190477614092e-05 5.99685782611108e-05 0.000121567569261525 0.000163288553873381 5.29792878121973e-05 0.000250955946249893 6.95954067282021e-116 1.24588674064272e-06 1.37077966212784e-05 8.60571093008315e-05 9.86246281807781e-05 8.11694379686407e-06 1.10251785405504e-56 2.73351021297292e-65 7.89522273364846e-06 0.000285007523869841 0.000207837125820874 1.91479746380727e-05 8.09607420247848e-06 4.96882291499441e-06 7.72256968622076e-05 0.000144112639571934 0.000337989296132447 0.000137358121891496 2.63171807638432e-06 5.31895294700825e-06 7.12543048567378e-05 XR_138873.2 LOC100848906 PREDICTED: Bos taurus uncharacterized LOC100848906 (LOC100848906), 0.0 4057 100.00 0.391705872103154 0 noncoding 0 0 0 0 -0.222584223935984 0.259373918727509 0.028242117375609 0.629633773173247 GCTTGAGGCGTGCAGAGATTACGTAGAGAGGAACCGTTTTGGACGTTTGTTTTGTTGGTTAATCAAAACATCTTTCCCTTTTGGTGCTATTGTTCAGAAGAGTTGTTCAAAAGGTCCTGATACCGTAGGTCCAAAGGAAAACAGCTAATTGAGAAAATGCCGCCTCTTGAAACGAGTATAGCGGTGGAAACAGATATAGCAAGGATTAAGTATCATATCGCACCAGAGCTTAAAGACCTATGCTTAATGATCAAAATTGCTCTTGTCGGAGCACTTGAAAAGTGTGAGAGAGCTGAGAGAACAGAAATGTTCAAGTCTGATGGGGCACAAAATCGAATTACTGAAGTGAACGCAAAACGAGAAATTTTCACAGCATGCAGAAAAAAGAAAAACAGAAAAAAGAATCAAGTAAAGAGAAGAAGGAAGACCTCGATGACCTGTCCAGGTGATAAAATCTACGCATAATAGGAATACCTGAAACAGAGGACAAAGCAAATGAAGGTCAAACTGTAATTAAGGAACTAACTGAAGAAATATTTTCAGAGTTAACAAACTAGATCCACAAGTAGAAAAGGCTCGAAGGGTGCCATTAAGTTTTAGTGAAAAGAAAGCAGTACCTAGATATATCCTGCTAGTTTTTTTAAATTGGAAGGGTAAAGAAAAAAAGTCCACAAGTATCTCAGAGAAGACAAGCCACTTATAAAAGGATGAAAGTTAGCCTGACCTCACATTTTTCCCTTGCAACTGTAAATGCCAGAAAACAATATCTGCAGTTTTCGCTCAGAGGCTCAGTATTATCCTGCTCTTTACGACCCCATGGACTGTCAGGCTCCTTGGACCGTGGGATTCTCCGAGCAGGAATAGTGGAGTGGGGTGCCATTTTCTCCTCCAGAGGATCTTCCCCACCCAAAGATGGAACAGGTGTCTCTTTTGCCTCATTCATTGGTGGCAGGTGGATTCTTTACCACGTGGGAAGCCCATCTATGGTTTTAAGGGAGAATAGTTTTGAACCAATTAGATGTCCTGACAAGTTATTTCTGTACCAAGGCAATTGGAAGCATTCACACATATGCAGAGGCTGAGAAGGTATATCTTTTAAGTACTGCCATTGAAAACTTTGTTAAGTGATGTATTGCAGCCAACAAATAACATGGATTAAAATAATAAGAGTAAGGAAGCAACGGTATAAAAAAATCGGTGTAAGATTTAGTTAAACAGCCTTAAGGTTACAATGTTACATAGAATTATAAAACTAAATGCAAACAAATATGTAAACTGGGTCTAAAATTTCAGCTTATGTCTTTATAAGCTTAAAAGGCATGCTAAATGTTCAATATGTAAAAAAAAAATACTGCTTTATTTTTAGCATGTAAAGATATGCATGTTCTTAAGTTAAACATGTAAAATAAAAGGACTTTGTCACTGTGGACAGAACCTGTAGAATAAAGGCATATCAAATGTTAACCTAACAAAATGGGAAAACCAGTAGTACAGTTTTATTTCCTCTAGTTTTAATTATAGGAGTGGGGAAGTAGCAAATTTGTAATGCTAATACTAGTAGTGTAAAAAGAAACTTTATAAATCATTGATTGGGGTGGTAGTGGATTGAAACCTTATTTAAAGTACATCTTGCCTGTGGAAAATCAGTACCTACTGCTTTATGTAGTAGATCATTGTAGGTAAATTTGACAATAAATGCTACAAATAGGACATATTCAAATTGTAGGGGAAGTGGTGAAAAACAGCAAGGAAGCATTAAAATTGGCATAAAATAGATTGATACAGGTACTGCTGAGTTACCACACTCAAACTGGTTAAATATTCCTATTTTTTTAAAAGATTGAAATTGGGTCAAAAATCAATCTATAATCCTGGATACCCACATTTGTAGAAAACCGTAAAAGAGTTTAAAGGTAATGAAAACAATGAGTTATAAGGGAGCAATATTTTTATTAGACAACTCAAGCTATAACATATTTATAAAATATACTGTACAGTTAAGATGCTTTATGTGGTAGATAACATGGCATTCATTGTAAAATAAATGTTCAATGTCTTCCTATGAGTGATAGCTTTACTGATGTATACATGTTTTTAAAAATTGTACATTTATAATTGGTACACTTTATATACTTAGAATTAGTAAAGTAATCCTTTAAAGAAAATACACATCGCAAAAACTGTTAGACTGTGACTTCAATACTTAAACCATTTAGTAAGCCAAATAAATGAAAAGTTGAGATAATTAAGTAAATAGTTTAGAGGTGTATGTGCATTTACATTATTTTCAAATTGTCCTGAAACATTTCTAAGTGATCTTATACTAGGGTGCAGAGAAAACTTTAATATATTTCTAGAAATCACAAATTATCACATTACAAAAAAGCCTAGGAGCTAAGTTAAATGCTGAAAAATAACATATTTGAAAATTTTTACTGTTATGAAATAGATTATAATAAATGGTGATAATTTAGGAACTGCAACAATAAGAACATTATGTGTTGTATATTCTGGGATGGATGTACAAAAGGCAGGGAGCTAGGAAGGAGAATACTAGGTGAAGAATGGCATATGCACCTAGGAAAGACCTAGTTACTGAACTTTGTAAATTTTGCTACCTTCCAATTCTAAGTAGTGGATTTACTTCAATATAAACTATTCTAAGTGCCACAGTTAACTTCTTGTTCAATTGCTAACTTGTTCAGTTACAACGCCATGGACTGCAGCACACTAGGTTTCCCTGTCCTTCACTATCTCCCAGAGTTTGTTCAAATTCATGTCCTTCGAGTCATTGAGGCCATCCAGCCATCTCATCCTCTGTAGCCCCCTTCTCCTCCTGCCTTCACTCTTTCCCAGCATCAGGGTCTTTTCAAGTGAGTCAGTTCTTTGCATCAGGTGGCCAAAGGATTGGAGTTTCAGCTTCAGCATCAGTCCTTCTAATGAATATTCAGGACTGATTTCCTTTAGGATGGACTGGTTTCATCTCCTTGCAGTCCAAGGGACTCTGAAGAGCCAGCTCCACAATTCTAAAGCATCCGTTTTTTCAGTGCTCAAGCCTTTTTTACGGTCCAGTGCTCACAGTCTGTAATGACTACTGTAAAAACCATAGTGGCAGATTTTTCACAACTGAATTTTACCATAATGAATGCTAAGGACTTAACAGTTGACTCTTTAAAGAAAGAGAAGCTAAATTCTCAACCCTCACCACCAACCTGCCCCTCTCCCCATCACTGTTTTGTTATTCCTTTCTCAGACATCTATATAATTCTTCTTGCTCTACAATCTATTGAAAAGTATCCTCCTCAGAAAAGCAGCGTGAGCATTGCCTGGGAGCTTGTTAGGAACGTGGTACATCAAGGTAACAGTGGCACAGATTAGATTATGAACTGTATTATTAAGCATCTATAAAGCTCAGTCCACACAGTGCATTGTACATTATGAACATTTAGTAAGTGTTAAATAGTGTTAGAATCTAGAAACAGGTTCGTTCAAGCAGTGTTATTGTATGAGAGATTTTGTGATTAAACTAGGCTGTTGCAGCATCCCTCTTTAAATCAACAATTTGGGCTCATTTTCTAAATACTTCAGATGAGAACTAGTGCTTCTGCTTTTCTTTGTAAAGAGGGAACACAAGGAAAACTCACTGAGCAATCCAAATTTTAAAACGTTGAAGGAGTACAATTTAAAATGGTAGGAAGACAATTTCCCCAGTGGTCCAGTGCTTAGGAATCCACTTCCCAATGCAGGGGATGCTGGTTTGGTCACTGGTCACGGAACTAAGATCCCACATGCCACACCCACATGCCACAACTACTGGGTGTGCGTGCTCACTCAGCCCACGCACAGAGAAGCCCGAAGAGAAGTCTTTGCACTGCATTGCAACAGGAGAAGCCTCCACACCGCAACAAAGACCCAGAACAGCCCAAAAATGCATAAAAAAGATCAAGGAGAATGAAAGAATGAACCTTTCTCTAGTAAATAAAATAACCATGAAGTAGATTGAAATTAGATATTTCAAGGTTTCTGAATAAAATACCCATTTACAGCAGCTATATATAATTGATAACAGGTAGATAAGAGCATTGGTGATAATTGTAATAGTAGCTTTAGTAAGTTACAGGACTTTTTGACTCGTGAATGATCTATTCCCCTGAAGGCAATATAACACCTTTCTGTTAGCAACGGAAAACCAGACCAGTGATGCTCAAATTTAAATATGCAAACCAGTTGCCTGGGAAGATCATGGTGGTGGTTTAGTCACTAAGTCGTATCTGACTGTTACAACTCCATGGACTGTAGCCCGCCAGGTGCTTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTTGATTGCCATTTCCTTCTCCAGGGGATCTTTCCGACCCAGGAATCAAACCCTGGTCTCCTGCATTGCAGGCAGATTATCAACTGAGCTATGAGGGAAGATCATATTAAGATGCAAATATTGATTCACTAAGTTTAGGGTAAAGTTGAGATTTCTTGTGAGTCCCTGTGGGGTGTTGTTGCTGCCACTTTGAGTACCTACCACACTTTCAAGAAGAACAATAATAAAAACTATGTTGTATCTACTGTCCATGAAAATGAGGCTCAAAAAAGGTAATTGGGCTTAGACCACATAGTAAGTATCAGAACCAAATGTGACCTCAAGGTCAGTTTATACCATCTATACAATCCTGTCTTCATCCATACTACAACACCTACGTAGAAGATTGTTGTGAGGAAAAAATTCACATAATGAATAAAGCTCATTACTTCAGGTAAGGTACATAGTTCAGAAAATATTGGCTCATGGAGGGGAAAATGAATTTTGTTTGTAACATGTTGAGCATGATTTGTGACAGGGACATTTCTGAATAAGTCAGACAGGTATTTAGAAATTCAGGTCCAGAGCCAGAAGAGATGTCATGATTGGAAATTTAGGTTTTAGCTTTCTGACTTGAAGCCGGCATTTGTATCCATCAGAAATCACCCTGGAAACAATGATAGGAAATAGAAGAAAAAGAAAAGGAGGTTAAACCTTAAGGGCTATACCTATATTTGATGGGTAGTTGTTAAAGAAGAATGAAATATATTCAAACTTATAGTTTCAACTGAATTAAACCAAAAATAATGCACTACAATCACTGAGTTAAATAATGAATAGGAGAACATTTTATCTTTAAAGAATTATGCGATGCAGGAGACCTGGGTTCATTCCCTGGATCAGGAAGATCCCCTGGAGAAGGGAATGGCAACCCACTCCAGTATTCTTCCCTGGAGAATTCCATGGACAGAGAAGCCTGGTGGGCTACAGTTCATGGGATCGCAAAGAGTCAGACACAACTGTGCTAACACTTTAGATTTTTTAACTTTATAAAAAATCTGTAGTAGCACACATTATTCCATTATTGATTCTAATTTTGTGATTCACTATTACATGTCTGTATCTAGTTAATTTTTGCAACTGGTGGTAGTTATGTTCTCTAAAGTTTCTTAAGAAACACTGAATTAGTGAATACTATATCACTGTCCCTAGAAGAAATACAGAATTAGGTTTCTACAAGCCTCTGATCACATTACTATCACCAAATGATGGATGCATAACCTTGTTTTAAGATACCTTATTTAGTACTGTTGTTAATTCACTGACATCAAACCCATGGCCAATAGAACTGTAACTCATGGCTTCAGTTAATCTTCATTCAGTTCAGTCCAGCCGCCCAGTCGTGTCTGACTC EMBV3_39376 GTAAGTTTTTCTCGTCGTTAGGAACCTGCCACTTCTGTTGCGTTCTCTCGGGCAGTGTAG Gene BVV0102_024294 + 0 NULL GK000025.2:28553312-28630816 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145091 TCONS_00145094 TCONS_00145078 TCONS_00145092 TCONS_00145080 TCONS_00145095 TCONS_00145072 TCONS_00145081 TCONS_00145096 TCONS_00145075 TCONS_00145088 TCONS_00145093 TCONS_00145086 1 XLOC_088731 Coding TCONS_00145080 XLOC_088731 Coding Coding C25H7orf42 25:28482568-28579946 j TSS108798 4970 2 TCONS_00145080_4 369 0.0243460764587525 15 0.949115294165974 0.000813322861265189 0.00223733206680254 0.00101147374264829 0.000324585477896446 0.000687324992276389 0.00121819575002117 0.000634803979290184 0.000816095158953508 0.00311233305287029 4.5429323639623e-81 4.06192981258831e-05 6.78753112428261e-46 2.35187009828318e-14 1.65271381115835e-10 0.00177489936787103 0.00404081702999864 1.49348737536712e-42 1.55114549144891e-14 1.25723110405741e-16 0.000828987955773089 0.000984585449231238 0.000574411569424777 5.25070395289519e-20 3.23020796670437e-29 0.0032188151626309 0.000816702510659988 0.00150350538265899 3.85008570210001e-11 4.00249061372297e-24 0.000241199989846594 XM_005224881.1 TMEM248 PREDICTED: Bos taurus transmembrane protein 248 (TMEM248), 0.0 6863 100.00 0.765392354124748 XM_005250482.1 TMEM248 PREDICTED: Homo sapiens transmembrane protein 248 (TMEM248), 0.0 2012 80.85 0.430784708249497 TCONS_00145080_4 sp|O18973|RABX5_BOVIN RABX5_BOVIN Rab5 GDP/GTP exchange factor; 0.0 733 98.60 0.964769647696477 2 coding 1 1 1 1 0.123199517529584 0.583683258833811 0.00844351814197321 0.902503185330986 AGGGAGGGCCGGCGTGAGGGCGGGTTGTGGACAAGTACCGGCCACCTCCTCTAGCGACGCGCGGAGAGCGGCTGACCTGACGTCGGTGGAGCCGGAGGCGAGCAGGAGGAAGATGAGCCTTAAGTCTGAACGCCGAGGAATTCATGTGGATCAGTCGGAGCTCCTATGCAAGAAAGGATGTGGTTACTACGGCAACCCTGCTTGGCAGGGTTTCTGCTCCAAGTGCTGGAGAGAGGAGTACCACAAAGCCAGGCAGAAGCAGATTCAGGAGGACTGGGAACTGGCAGAGCGACTGCAGCGGGAGGAAGAAGAGGCCTTTGCCAGCAGTCAGAGCAGCCAAGGTGCCCAATCCCTCACATTTTCCAAGTTTGAAGAGAAGAAAACCAATGAGAAGACCCGCAAGGTTACCACAGTGAAGAAATTCTTCAGTGCTTCATCCAGGGTTGGAGCAAAGAAGGCAGAAATTCAGGAAGCAAAAGCTCCCAGTCCTTCCATAAACCGGCAAACCAGCATTGAAACGGATAGAGTGTCTAAAGAGTTCATAGAATTTCTCAAGACCTTCCACAAGACAGGCCAAGAAATCTATAAGCAGACCAAGCTGTTTTTGGAAGCAATGCATTACAAAAGGGACTTAAGTATTGAGGAGCAGTCAGAGTGTACTCAGGATTTTTACCAGAATGTGGCTGAAAGAATGCAGACTCGTGGAAAAGTGCCTCCAGAAAGAGTTGAGAAGATAATGGATCAGATTGAAAAGTACATCATGACTCGTCTCTATAAATATGTGTTCTGTCCAGAAACTACTGATGATGAGAAGAAAGATCTTGCTATTCAGAAGAGGATCAGAGCCCTGCACTGGGTTACACCTCAGATGCTTTGTGTCCCTGTTAATGAAGAAATTCCAGAAGTGTCCGATATGGTGGTGAAAGCAATTACAGATATCATTGAGATGGATTCGAAACGTGTGCCCCGGGATAAGTTGGCCTGCATCACCAAGTGCAGCAAGCACATCTTCAATGCCATCAAGATCACCAAGAATGAGCCGGCTTCAGCCGACGACTTCTTACCCACACTCATCTACATTGTCTTGAAGGGCAACCCCCCACGCCTTCAGTCCAACATCCAGTACATCACCCGCTTCTGCAACCCAAGCCGACTGATGACGGGAATGAAGAGTCTGAGGTTCGGAGTGTTTGTGACCTACTCAAGGGGATCCACACAGTGAACAGCAAAGCCAGGACTAGACTCCAAATCCCACCTCCAACCAGAGTCTCCTGCTCTCCTTCCTGCTGTTGAGGTGGAGCTGATCAGAATAATGTTCAACATCAACCCCCTGGAGAACCTGAAGCTGTACATCAGCAGCCGGCCCCCCTTGGTGGTGTTTATGATCAGTGTCAGCGCCATGGCAATAGCTTTCCTGACCTTGGGCTATTTCTTCAAAATCAAGGAGATCAAGTCACCAGAAATGGCAGAGGACTGGAATACTTTTCTCCTGCGGTTTAATGACTTGGACTTGTGTGTCTCAGAGAATGAAACGTTAAAACATCTCACAAACGACACCGCAGCTCCGGAAAGCACAGTGACCAGCGGCCAGGCCAGGACGTCCACGCAGTCCCCACAGCCCCTGGAGGATGCGGGCCCAGTGAACATCTCAGTAGCCATCACCCTCACCCTGGACCCACTCAAACCCTTCGGCGGGTACTCGCGCAACGTCACCCATCTGTACTCCACCATCCTCGGGCATCAGATCGGACTCTCGGGCAGGGAAGCCCAGGAGGAGATAAACATTACCTTCACCCTGCCCACATCCTGGAGCTCGGACGACTGTGCCCTTCACGGGCATTGTGAGCAGGTGGTGTTCACAGCCTGCATGACCCTCACAGCTCACCCCGGCGTGTTCCCTGTCACCGTACAGCCGCCGCACTGCGTTCCTGACACCTACAGCAACGCCACGCTCTGGTATAAGATCTTCACCACGGCCAGGGATGCCAACACAAAATACGCTCAAGACTACAACCCTTTCTGGTGTTACAAGGGGGCCATTGGAAAAGTCTACCATGCTTTAAACCCCAAGCTTACAGTTATTGTTCCAGACGATGACCGCTCGTTAATAAACTTGCACCTCATGCACACCAGTTACTTCCTCTTTGTGATGGTGATCACGATGTTTTGCTACGCGGTTATCAAAGGCAGACCCAGCAAACTGCGTCAGAGCAATCCTGAATTCTGTCCCGAGAAGGTGGCTCTGGCAGACGCCTAATCCCACAGCTGCCGTTTTCCCAGAGAGACTGAAAGAACCATAATCATCGCCTGCTGAAGCCAGCCTGGGCCTGGACACTCTGTGAATACATTATCTTGCAATGTTGGGTTATTCCAGCCAAAGACATTTCAAGTGCCTGTAACTGATTTGTATATATTTATAAAAGTCCATTCAGAAATTGGTCCAGTGATGCACGTGCTTCGCACTGGGTGCCGCCGGAGCCCTTCAGCCTCACCCGCGGACTCAGCGGGATGGCCCACACGGCGCCGGAGAGGATTCGCGACCTCGCTGCCGGAGCAGGCCGTGCTGTCTTTCCCGGGGGCCCGAGGCGTGTCACTGCTGTGGGGGAGGTTTGCTTTGGTTCTTGTTCAGCCCGATCTGTACAGAATGTTCAAAACAGTCTGCACCTTTGATATGATACTGCATTTCCAAAGCCACCCCAATCCAGTTTGTGGATTTTATGTGTCTGTGGCTTAATAATTATAGTAACAACAATAATACCTTTTTCTCTGGTTTGCTTGCAAGGAAACATACCTAAGTTGTTTTTTTTTATCCCCCTCTTTTTCCCTTTGAAGAGAAAATAGTCACATTTTACTGGTGGGGGAGACTACTACTCTAGTTAGAGATTTGTGCTTTTATCTTGAGTAAAAAGTTAAATACTTAAAAGTCACTTACTTGGTAAAGATCAAAGTTTCATTTTCCACGTGGACAGCGAGGAGCCTGGTCTTGTTTGAGTTGAGCTGGCTCAGAGCGCTCCACTGTCCTTTTTCTTCTCTGTTGTCCCTTACCTCCGGTATAAAAGGTGAAACAGCTTCCTCACTCCAAAGGGCTTCAAAAATGAAGTACAAACGGCTCTAGAGTGAAAACGAGCCGTTCTCTTTTCTGCAGTGCAGATGACAGTAAGGAGAGGGAGGGCGCTGGTTCGGTCTAACAGTCATGAAAGGGCTTCTTGTTTTCTTTGAGGAGGGAGTGGATTTTTCTTTCCCTGGTGTTTTATGGGGAGGTGTTTCATTTTTATGCAGTTAACATACTTGGAAGGAAATGGCAACTTATAGATACAACATTAAGAAAACGTTGGCTGTGAAATCTGAGGGAAAATGATTCTGATTTGCCATTTATCAGGAAAACCAAAAGCATTTTTTTTTCTTATAACATTCTGATAATCTACTTCTTTTATCCCTTTTTCCTTCCAAGCCATCTTCATTTTAAAATGGTTGTGCATCTTTTCTAGCCCTTTATCACTTGTGTTATTACCATTTTTCTTCACAGCTTTTTGCCTTACTGACTCACAGTCATTAATGATTTCTGAGAGTTCTCCCAAGCAGTGATAGAGCAAAAGGGCAGTTAAGTCTTGGGCGTGACTGCCAGCACTTCTTTCCCTTAACTCCAGGTCTGTAGTCAGTTCTAAATTAGAACCAGCCCTGCAGTCTGAAATATATTGGCCTAGAACATTTTATCCCAAGTTTTTTTTTTTTTTAAATCCCAGGCATTTTTGAATGGAAAACATTTGTGGGCTTTTACTGAAGGTTATTAAAATAATCATCATAGTAACTTGATATGTTAGTACTTTTTTTTCCCTTTTAGTACATTTCAAGCACAATAATCAGACTTGTCTATCCGTTTTTTTTTTAATGATATGAGTTGCTTACCTGATGCATAAGCTAATCAGTTAATTTAGTTTTCTCTTTAGAGACTTTGAGACTTACAAGATGAGATTGAGAAAAAGCCATTTGCTTGGCCTTTAGAAACATCAGTATCATTAAGACCAACAGATTTTAGATGAAGCTGCTACTGAATTAATAAAATCCCAAGGAAGTAGAGTTACAGAAATAGATTATTAACTGGCAGAGTAATATAAAAGGAAGACAGGTGAAAAAAGTCAGTTTCACTGGTTCGTTGGGTCCAGCTTGTTGCTAATATTAATGACCCTTGTGTCAATTACAGGGACTGGCTGGCATCTGCTGGCAGGGGAGGAGAGACTCTGTTAGGCACAAGGAAAGGAAGTGCCAAAAACGCCTGGACAGTATGACTTGTCACGAGGCCAGGACACAAACACACTTTAAACCCAGCATTCTCCCCTCACAGGTGATCTCAGATCTTACGGAAACCCAGTCAGGTGTACAAAGGAAGGCTGGGGATGCCAGCGGTGCTGGGTCCACCGACCCTCAGCAAGTCCAGAGGACCCGTTACTACCCGGGCACTGACAGACAAGGCCCTGTCCTCCGCTGTCCCTCACTGGGAGGGCGGGGGACCTCAGGATGAGAAGAGGGTCGTAGACAGGGCCTGTCTCCCCTCCAGGGGTGACCCCGTGCAGAAGCACTGGCCCGTCCTCAGGCATCTTGGACCGGAGTCCAACAAAAGGTCAGCAACTTACTATTAAAACAGTTGTTTCAGATCATATTGATCTCTTTCCCTTTTCCTTTTGTCCTTCCACTGTATGACTTGAATCAGTTTTGATTCTATTTGTAAGTTTTTCTCGTCGTTAGGAACCTGCCACTTCTGTTGCGTTCTCTCGGGCAGTGTAGGGGTTCAGCCTCCTGGTTTTTCACCCTCCTGCAGGCACTGTGGGGCTCTGAGGGCCAGCGGGTCCGTGTCACTCACCTTGCTGCATGATGGTCGGTAGCCGATCTGTTCCGGCATTCACTCCCAGGTTAATTTTCTGTGTTGAAACTGTGCACATGTGCTTTCCAGAATAAAATGTCTGAATTTACTT EMBV3_34436 GCATAGATGCCTTCCTGCCTTGGAGGACAATCAACTGTACAAGCTGGAGACAGGAGGAAA Gene GeneID:529686|LOC529686:XM_002695047:377_cdna Constitutive 0 NULL GeneID:529686 18 GENE LOC529686 NULL similar to F-box protein 27 EMBV3_03851 GATCAGAGGACATTTAAGTTCCAACCGCAGTTCTTTCCACATGTGACAGCTTGGTCGGGG Gene BVT0102_300696 + 0 NULL GK000013.2:75310191-75316422 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043950 TCONS_00043948 1 XLOC_026080 Coding TCONS_00043948 XLOC_026080 Coding Coding UBE2C 13:75306705-75311909 j TSS32400 2582 1 TCONS_00043948_1 186 0.210302091402014 6 0.50490101864309 0.000530953349143099 0.000486241026014364 0.000599294828131993 0.000260137501532884 0.000539327061192911 0.000183387457494321 0.000119157583920229 5.64963029571845e-05 0.000157268605007471 0.000150084161547938 2.58485817996866e-05 0.000113742286898811 0.000356753096398236 0.000230622953916373 0.000168981924238551 0.00193652128697339 0.00163245074350084 0.000690248771084104 0.000109041776823831 0.000283795884872844 6.34250916591963e-06 0.000341284581588414 0.000674926917523821 0.000187872294201477 0.000212823704132029 0.000102997763755123 0.000140762186356771 0.000114933231235042 0.000225241352769395 0.000575090137644277 NM_001037449.2 UBE2C Bos taurus ubiquitin-conjugating enzyme E2C (UBE2C), mRNA. 0.0 1380 97.29 0.314097598760651 NM_007019.3 UBE2C Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript 0.0 902 83.28 0.331138652207591 TCONS_00043948_1 sp|Q32PA5|UBE2C_BOVIN UBE2C_BOVIN Ubiquitin-conjugating enzyme E2 C; 3e-130 367 96.24 0.994623655913978 1 coding 0 0 0 0 -0.083982115673009 0.697710759297504 0.0215829047096256 0.737740597301306 GCTGCCGGAGGGTTACAATTCAAACGCGGGCGGGCGGGCCCGCAGCCCTGCAGTTGGAACTGTGAGCTCCGCGTACCGCTTTTCTCCGTCTCATCGCCGCCCGGATGGCTTCCCAGAACCGCGACCCAGTCGCCGCCAGCGTCGCCGCCGCCCGTAAAGGAGCCGAGCCCAGCGGGGGTGCTGCCCGGGGCCCTGTGGGCAAGAGGCTACAACAGGAGCTGATGACTCTCATGATGTCTGGCGATAAAGGAATTTCTGCCTTCCCTGAATCCGACAACCTCTTCAAATGGGTGGGGACCATCCATGGAGCCGCTGGCACAGTAAGTGCAGGGTTGGGAGAGGTATATGAAGACCTGAGGTATAAACTGTCCCTGGAGTTCCCCAGTGGCTACCCTTACAACGCGCCCACGGTGAAGTTCCTCACACCCTGCTACCATCCCAATGTGGACACCCAGGGTAACATCTGTCTGGACATCCTGAAAGACAAGTGGTCCGCCCTGTATGACGTCAGGACCATCCTGCTCTCCATCCAGAGTCTGCTCGGAGAGCCCAACATTGATAGCCCTTTGAACACACATGCTGCCGAGCTCTGGAAAAACCCCACAGCCTTTAAGAAGTACCTGCAAGAAACCTACTCAAAGCAGGTCTCCAGCCAAGACCCCTGACCTGGGATGTCCAGCTCTCCCTGTGTTCTTTTGTTTTTCTGTTTTTCCTTAGGCACTCTGTCCATGCCTCAGTTTCTGTACAGGACTCTGTCTTATCTGTGGTGTCATTTTTGTTTTGTTTCTGTTTTTTAAATTAAGTGTGGTTAAACCCTTGTGATAAATATATTAAATAAATACATTTTGGGGTTTTTATAGCAAGTTGCTGTTTTGTCATTACCCAAGGGTTGGAAGTGCCCAGGGTCGGCAGAGATCAGGTTTAGGATTTGGGTTCTCTGCTCCACAGCCCAGGGAGTAGAAACAGCTGATAGGCTGTAGGGCTGAGCAAGGAAGTGACAGGATTCCCTCCCTTGTAACCTGAGTTATTTTATGATTCTGCATCTGTTTCCTCATCTATAAAACAGGTGTCACAAAATGCTAGTTTCTGGGAGTTCCCTGGGGGTCTAGTGGTGAGGAGTCAATGCTTTCACTGCTGCAGCCCGGGTTCAACCCCTGGGAACTGAGATCCCAGAAGCCACACAGCGTGGCAATAAATAAATACTAATTTAAAGAAAAGCAAAATGCTGATCTTATGGAGTGGTGACACAGACCAGGAACACAGGTGTTGTCCCAGTTGTGTTGCAGATGAAGCTGAGCCAGATCTTAAGACTGAAATGGAGCGATACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGAGGGCTGGGAGGAGGACCAGCTACCCACTTTATGACAGTAGATTTTTTGACCCTGAAGAAGGAGCAAGATGACATTCAGGTAACCCTACAGCCGGCCCAGGGTCTGGGGAGACAGCCAGGGGAAGTTTTCTGGATGAAGGTCATAAGTCACCCCTGGCCCAGGTCCTCCACTGGTGGTTCCATCTCCACTGGGGCACATTCACCTGCTCCATCTCCCAGCATTTCCTCTGCTTGCTGCACCACTGGTCCAGAGCCCCAGCCCCCTGGGCCATCTTTCCACTGACCCACCATAGGCCTTTGGGCCCCTGGAAGGAAACCCCCGTGTTGACCAGCTGGGTCCCAGCAGGCCGAGGTGCTATGCCCTGCCCAGGTCCTGCAGGAAGATCTCCGTGAGAAGCTTAGGTGCACTCCAACAAGGCCCGAGTGTTGCCCTGCTCGCCTAGCCTGGTCAACTGTCTGCAGCTGCTTGTGCAGGCCTGGGGTAGGGCAGGAGGAGGAGATAGCAGGGAGACCATCAGGAAGGTTCTCACCCACCTTTTTCTCTTAATCCAGCTAGCCCACATCCCTGTGCCCCGACCAAGCTGTCACATGTGGAAAGAACTGCGGTTGGAACTTAAATGTCCTCTGATCAATTTCTTCATCTCAAATTGTGCTGTTGGCTCTCTCCTTGGAGCTTAGACTCAAGTTGTTCAATCTGCTGTGCATATAAACCTTCCTGGGATTTTATTCAAATACAAATTTTGATTCCGTCCGTCTGGGTGGGGCCTGACGCTCTGCAGTTCCAATTGGCTCCCAGGTGGTATCACTGCTGTTGTCTAGTTAAAGGTACAGAGCTGTCTTCTCAAGGTGTGCTCCTTCCACGTGTCACCTGGATCTGGCTAGAAATGCAAGTTCTTGGCCCCAGTAATCTGTCCAGATGATTCTGATGCTGTCAAATTGAAAATCACCAGACCAGGCTTCCCTGGTGGCCCAGTGGTTCAGAATCTGTCTGCCAATGCAAGGGACACAGGTTCAACTCCTGGTCCAGGAAGATCCCATATGCTACAAGGCAACTGAGCTCATATGCCACAACTACTGAGCCTACACTCTATAGAGTCCACCAGCCACAACCCCTGAGCCCACGCATGCCCTAGAGGCCATGCCCTGCAAAAAGAGAAGCCACTGCAGTAAGAACCCCAAGCATTGCAACTAAGAGTAACCCCGCTTGC EMBV3_04922 TAAAGCACTTAGGGCAGGGGAAACCCTCTCAGTAATCACGGAACCTAAGGATATGATTTG Gene GeneID:540937|MARCH5:NM_001034715:39_cdna Constitutive 0 NULL GeneID:540937 26 GENE MARCH5 MGC128168 membrane-associated ring finger (C3HC4) 5 EMBV3_20378 TGGTGCCAAACTTTAGTGTTCGTAGGCAACTCAAATATCTCTGCTTAGAGTCTCCAGCTG Gene BVT0102_437283 + 1 EMBV3_17145 GK000022.2:53486046-53492242 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34889 AGAAGGCATGAGCAACATGACTGTGCCAGGTGCCTTTTGGAGAATTTCTGGCTGTCAGTC Gene GeneID:282438|PRDX6:NM_174643:22_cdna UTR3_Alt 4 NULL GeneID:282438 16 GENE PRDX6 AOP2 KIAA0106 peroxiredoxin 6 EMBV3_42077 AGAGGGTGTCCTGGTTTGGGGCTCAGACAGAGGGGTAGCGGTGGGTCATTTTGTTGGGAA Gene GeneID:282522|SERPINF2:NM_174670:43_cdna Constitutive 0 NULL GeneID:282522 19 GENE SERPINF2 PLI serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2 EMBV3_41661 GGCTGCATTCATCTCTCGACACTCCTCCAGCAAAATTCAAGCCTCACACACTTGGATCTG Gene GeneID:100301026|NLRP2:XM_002695416:53_cdna Constitutive 0 NULL GeneID:100301026 18 GENE NLRP2 NULL NLR family, pyrin domain containing 2 EMBV3_34730 AAACAAACTATGGTATATGACTCAAAACAGGAGTGATCAGCATTCCAGTTTTTCAAGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21642 GCTCCAGTTCCTAGGACTCTACAAGAAATCTGGAATCCAAAGTTGAGCTTAACGCTTTAA Variant GeneID:517171|SAR1A:NM_001034521:320_cdna 189^439 2 EMBV3_16883 GeneID:517171 28 GENE SAR1A MGC127517 SAR1 homolog A (S. cerevisiae) EMBV3_40121 AGATCCACCCGCTCAAAAGCGAGAACAGGAAGTCGCCTATGACTTTCTGGCCGCAGAAGA Variant GeneID:507493|ITFG3:NM_001075318:5_cdna 89^293 1 EMBV3_05088 GeneID:507493 25 GENE ITFG3 NULL integrin alpha FG-GAP repeat containing 3 EMBV3_12850 TTAAATGTACTGTAAGCCTCCGATTGTTGTATAGCTGGGTTGCGGGTGACTGCCCGTCTG Gene GeneID:520956|FAM108C1:NM_001099014:39_cdna UTR3_Alt 2 NULL GeneID:520956 21 GENE FAM108C1 MGC152409 abhydrolase domain-containing protein FAM108C1 EMBV3_26005 GAGAGCGAACTGGTCATAGCAAACACCCTCTTCCACAACACAAGAAAAGACTCTACACAT Gene BVV0102_458713 + 0 NULL GK000001.2:106817953-106851521 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14410 AGACCTGCTGAGGCACAGTTTGTTACCTCTAATGTATTTGGATTTTTTGCAGACCAATTC Gene BVT0102_247261 + 1 EMBV3_28997 GK000010.2:10609980-10613893 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012539 TCONS_00012542 TCONS_00012537 TCONS_00012535 TCONS_00012536 TCONS_00012543 TCONS_00012538 TCONS_00012541 1 XLOC_007886 Coding TCONS_00012539 XLOC_007886 Coding Coding PAPD4 10:10549960-10611294 j TSS9506 3088 1 TCONS_00012539_1 355 15 0.949896466828624 0.000648429234861103 0.000394750208279058 0.000957343603384845 0.000267647423452137 0.000577983875203793 1.29700154518626e-07 0.00102096101186755 0.0011308171163679 0.00166205206012278 0.000136636071681261 6.87000651997423e-17 4.42444181597192e-06 0.000632545020732518 0.000226843699173821 3.26478555922799e-05 0.00256353596502448 0.00291142538673509 0.0042103624558537 0.000904104296118591 2.06631125856071e-12 4.81369473915616e-17 0.000517442314637011 0.00233835253238042 0.00242748936511724 2.22625266510439e-06 0.00104199580682976 0.00044487848922358 8.91856081448919e-05 0.000567404558778379 0.000136672601844607 XM_005211340.1 PAPD4 PREDICTED: Bos taurus PAP associated domain containing 4 (PAPD4), 0.0 2893 100.00 0.51910621761658 NM_173797.3 PAPD4 Homo sapiens PAP associated domain containing 4 (PAPD4), transcript 0.0 1903 88.25 0.480246113989637 TCONS_00012539_1 sp|Q2HJ44|GLD2_BOVIN GLD2_BOVIN Poly(A) RNA polymerase GLD2; 0.0 716 98.88 0.991549295774648 0 noncoding 1 1 0 0 1.04114594478133 0.0100998661951046 -0.0222068393874481 0.731917765181453 TCACGTCGGTCTTCCGGGTATTTCCGATAGGGCTTTCTACGCCTCTTTTTTTCGGTTTCTTTTTAGTCTTCCGTCTCTTGCCACCGCCCCTGAGCTCCCACACCCTTGCCGGCCCTGCCTTTTCTTGTGTCGCTCCTCCCTGCTGCCGAGGCCGAGACTTGGCGCTCAGCCCGAAGCCAGGCCTATCCATTCCGCGTGGGCACTACCTCCTTTGGCTCGGGAGGAAGCTAGGACCAAGCGCGCCAGGCCGTCGCTCCTGGAGCTCCTGGGCTGGGGGTGCCGGTCGACCCTCCTGCGCAGTCCTTTCCCGAGGACACTTTCTAGGACCAAACGAGGAAGAGCGTCTCGAGACTCTGCATGGGGTTTCAAAGGGTGGTGAAGAGCTAAGGTAGAAGAATACATGTTGTCTTTTAGTGAACAAGAGCATGTTCCCAAACTCAATTTTGGGTCGCCCGCCTTTCACTCCAAACCATCAACAACATAATAACTTCTTTGCCCTGTCACCAAGTCTTTACTCACACCAGCAGCTTATAGATGCACAGTTCAGCTTTCACAATGCAGACTTGTCTAGAGCTGTGTCATTACAACAGTTGACGTATGGAAATGTCAGTCCAATACAGACCTCAACTTCCCCATTATTTCGAGGAAGGAAGAGATTAAGCGATGAAAAGAATCTTCCTCTTGATGGTAAACGGCAGCGTTTTCATTCACCCCACCAAGAGCCAACTATAGTTAACCACATAGTGCCTTTATCAGATGAAAGAAGATACTCAATGTCACCATTGTTTCATACACACTATGTACCAGATATAGTCAGATGTGTTCCACCTTTTCGAGAAATATCAATTTTAGAACCTAGAGAAATCACACTGCCTGAGGCCAAAGATAAGTTGAGTCAGCAGATACTGGAGTTATTTGAAGCATGTCAGCAGCAAGTAAGTGATTTAAAGAAGAAAGAACTCTGTCGAACAGAGCTGCAGAGAGAAATTCAACTGTTATTTCCACAAAGCAGACTTTTTTTAGTTGGGTCTTCTTTAAATGGATTTGGTACTCGGAGCAGTGATGGTGACTTATGTCTAGTTGTTAAAGAGGAACCAGTAAATCAGAAGACTGAAGCACGGCATATACTCACCTTAGTCCACAAACACTTCTGTACTAGACTTTCTGGTTACATTGAGAGACCTCAGTTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGTTGTGTGGAGTTCGACTTGAATGTAAACAATATTGTTGGAATAAGAAACACATTCCTTCTCAGAACTTATGCATACCTTGAAAATCGAGTTCGTCCGTTAGTACTGGTGATTAAGAAGTGGGCCAGTCACCATGATATAAATGACGCCAGTCGCGGTACTTTGAGCAGCTATAGTCTTGTACTGATGGTTTTGCACTATTTACAAACCTTACCTGAACCCATCCTTCCATCCATCCAAAAAATTTACCCACTGGAATAGTCAGATGATTTCAGTTCGTGAAGCCAAAGCCATTCCCAGGCCTGATGGTATTGAATGGAGAAATAAATACATCTGTGTAGAAGAACCTTTTGATGGAACAAATACAGCAAGAGCTGTGCATGAAAAGCAGAAGTTTGATATGATCAAGGATCAGTTTTTAAAGTCATGGCACAGATTGAAAAACAGAAAAGATTTGAACAGTATACTACCTTTAAGAGCTGCTATCCTGAAAAGATAACTGGCCTCTATTTCTTAATAAAGAGCAGTAGTAACATCATAATACGTTTTGTCTACCTTCATCGTGGTTTCTTTTTAATTGTTCTTGTTTTCATGTTTTATTCTTAAGACATACTTATATAAAGAGTGCATATTTTATTATGATGTTTCCTAATAAAACCCTTTGATTTAAAGATGTATTTTTGAAAATGTTTACATTGATGGTTAGTAATATTATGGCATGAATTTTCAGGAGATCAGATAAAATATTTTTGGGGGAATTATCGAACAAATAAAAGGTTTTTGCTATAACTTTAATTAATTGTACCACATGCTAACACTGAAGAGACATGTGGACTTTTTTGGAAAGGGTCTGATTCCTACATCCTTAAAGTAGGACCTTCAATAGATGGTTTGTTGCCTACGTCTCTTCTAGTGAAGTGAAGGTTTGAGTCAGTTATTCAGTTACTTGAAGCAAAATGACATCTTTGATTTCATTGAAAGAACTACAGAGGCAGGAGATAGTGGACAGTTGCCCTAAGCCCTCACTTGACTGATCAGGAAAGACTGAGGCTCTGGCTGTGTACAGAATAGTGTTTCATCAGTACCTCACATGCCTTAGGTGGACTCAAGATTGCTTTAAAGTTTGTGTTGAACAACAGTACATTTTGCACTAGTAATATGAGCACTAACTCTGTATTATACAGCAGTTAGGGAATTGTTTTGAAGAATTGGTTCAGTGTAGACATTTCGAAAAGATGAAGTTCTCTGTGCTTTATGATAGCTTAGTGCAATATGCCCGTTTGCTTTACTTCCCATTTTCCTGCTTTTATTTTTCCTGTGATATGAAGCAACAGAAACTGAAAGATCAAAATTGAGATTATATCCTATTGATAGATTCAGAGTTTTATCTGTGTATAATTATAGGATTGTAATCTAAACTGGAAGTTGTCAGTAGTAAGCCACTATAAAATGTTCTAGATAAGACATAAAATTACTATAAATAAAAGCATAGCATTTGTAAAGGTTTCTTTTTTAGTATTTCTTTTCCACAAGAAGAAATAGTGGTGGCTGCTAAAAAAGCTACAGTGTTTATTAAGGTTGTTTTTGGTGTAAATATTTGTAAATTGGTCAGTGCCTGTAAATTTAAATATAAATAATCTTAAAAAACAGTTCTAACTTTTTCTAAAGGACTGTGTACAACTTTTTTTAAGACCTGCTGAGGCACAGTTTGTTACCTCTAATGTATTTGGATTTTTTGCAGACCAATTCAAATGCTAAGACTTGCTTTTTGACTTGTAAAAGGTGCATATTTTCATTTTTTTCTTTAAGTTTAAAATTTTGTATGATCAAATGGAATAAAGTTTATATATGAAAAT EMBV3_09010 CCTCTGGAAGTGAAACATGTGATCATCCAGCACAAGGTATTCATACAGAGACCTGTACAG Gene GeneID:531877|PTPN12:XM_002686751:30_cdna UTR3_Alt 2 NULL GeneID:531877 4 GENE PTPN12 NULL protein tyrosine phosphatase, non-receptor type 12 EMBV3_07091 CTCCTCAAGTATCGAGCCAAGAAGCTGACCTCCCCAGCAGAAATGCTGAATAAGGTCTTC Gene GeneID:100298021|LOC100298021:XM_002699642:125_cdna Constitutive 0 NULL GeneID:100298021 X GENE LOC100298021 NULL similar to melanoma antigen family A, 8 EMBV3_36346 GTGCACAATACGGCCCAACTGCACCGTTTACTCAGGCTATTACAGAGGCTTTAGGAAATC Gene GeneID:100140993|LOC100140993:XM_002693635:189_cdna Constitutive 0 NULL GeneID:100140993 15 GENE LOC100140993 NULL similar to Gag EMBV3_13133 CACTGGTATCAGCAGTATCAACATGGCCCTAGAGATCAACGGGGTGGTCTACACTGGTGT Gene GeneID:522142|ARID3C:XM_002689811:123_cdna Constitutive 0 NULL GeneID:522142 8 GENE ARID3C NULL AT rich interactive domain 3C (BRIGHT-like) EMBV3_14085 TTTCTGGAAGACCCTTTGTTCCTGGGATTCTTTGTGGTCTGAGTGTTCCCTTGGCCTCGC Gene BVT0102_080178 - 1 EMBV3_25486 GK000003.2:107244781-107558700 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11682 GCTCTGGGAATGGTGGATGTCTTTGACCGCTCGAGGGCTAACTTGTCTGGCATAATTGCA Gene GeneID:522479|LOC522479:XM_002683806:1_cdna Constitutive 0 NULL GeneID:522479 24 GENE LOC522479 NULL similar to serpin peptidase inhibitor, clade B, member 11 (predicted) EMBV3_31336 AGACACAATAATGAGAGAACATATATTTGTGCCGAGTGTGGCAAAGGCTTCTTCCAGGCA Gene GeneID:100337058|LOC100337058:XM_002695503:290_cdna Constitutive 0 NULL GeneID:100337058 18 GENE LOC100337058 NULL zinc finger with KRAB and SCAN domains 4-like EMBV3_15315 CGCTTTCTACCTGCCCGGCCTGGCGCCCGTCCAAGCATCAGAAGGAAAACGGCCATCTGA Variant GeneID:514455|TM9SF2:XM_002691977:61_cdna 51^170 1 EMBV3_38741 GeneID:514455 12 GENE TM9SF2 NULL transmembrane 9 superfamily member 2 EMBV3_13018 CGCTAAGCCCAAGGTTGCCAAGCCCAAGAAGGCTGCACCCAAGAAGAAGTAGGTTGTTAA Gene GeneID:513971|HIST1H1C:NM_001083425:80_cdna Constitutive 1 NULL GeneID:513971 23 GENE HIST1H1C NULL histone cluster 1, H1c EMBV3_34668 GGTGGTGATGAGGATGTAGATTTACCAGAAGTAGATGGAGCAGATGATGATTCACAAGAC Gene GeneID:493638|PTGES3:NM_001007806:932_cdna UTR3_Alt 3 NULL GeneID:493638 5 GENE PTGES3 CPGES MGC127581 prostaglandin E synthase 3 (cytosolic) EMBV3_26743 GTGCTGCAGGAAAAAGCGCTCAAGTTTATGACATACAACAGCTGTGCCAGACTCTGCTTA Variant GeneID:534072|BTRC:NM_001083475:183_cdna 72^149 1 EMBV3_39609 GeneID:534072 26 GENE BTRC MGC142684 beta-transducin repeat containing EMBV3_32951 CAGGGACCAGAAACACGAGCCCCTGCACTCGCCCACCTCCAAGAGGAAAAAGGTGAAATT Gene GeneID:512602|LOC512602:XM_002694439:4_cdna Constitutive 0 NULL GeneID:512602 17 GENE LOC512602 NULL similar to mCG8571 EMBV3_22392 TCTAGGAATACTGTCGTATCTCAAAGAATCCAGGTCCTGAAAACGTGGCTGGAAGGCAGT Gene BVV0101_046677 + 0 NULL GK000008.2:22832958-22876231 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224626 1 XLOC_137576 NonCoding TCONS_00224626 XLOC_137576 NonCoding NonCoding LOC100847941 8:22843210-22860252 j TSS168394 537 4 0.968722492811455 1.00853373840253e-108 0 2.67567258018584e-85 0 0 8.07397592200327e-186 8.30583258827958e-125 0 3.24168338546271e-160 0 5.18718357806142e-79 4.17749848004816e-05 0 0 0 0.000104995814506677 0 0.000515111592832948 2.88830584579829e-151 1.93134037769174e-112 8.1331002939639e-140 0.0010701468426581 0 2.55862683033663e-09 6.77607638135929e-09 5.33661595254857e-05 0.000197745519096727 0.00026141270332974 0.000111705934255583 3.98580703897609e-88 XR_231836.1 LOC100847941 PREDICTED: Bos taurus uncharacterized LOC100847941 (LOC100847941), 0.0 875 97.10 0.962756052141527 0 noncoding CCGCGCGACCCGCCTCCAGTGACGCGAACTGGAGCGCCTGATCCACCCGGAGATCCCGGGAGCCTGGGCGAGGCGCCGCCGGGGCTTAGGGAGCGCGTGGGGCCGTGGGAACCGATCAAAGTTTTCATCAAGTTCTTCTGTATGTATTGAGACTGAAAAGTGACCGAAACTTTTCATTATAAAAGCTTCAGTATCTCAGGGACATCATGACTTGTCCTCAAAAAATACATGCACTTCTAAGAAGATATGACAGTCTGCATTGATATGAGCTGCCAGGTCATTATTCTAGGAATACTGTGGTATCTCAAAGAATCCAGGTCCTGAAAACATGGCTGGAAGGCAGTTCTTAAGGAAGTTCTGTGAAGACAGATAAGGTGTCCTCCTCCACCTGGATTCCATCCTTTGTTTCCGAATCTCAGCATCCTTATCAACACGGTTTTGGAGGTGCCCAATCCAGTTGTCCCATTCCATCTGTCACTGTAACGCCCTCTCGTGGAGCCAACAAGTATCACATCCATAAACTGCTTATAATTAACA EMBV3_00364 CAGCAAACATGCAAGGTCACGGACAGGGTGCCTGAGGTGGTGACAGTGAACAAAGTGTAT Gene BVV0102_329396 + 0 NULL GK000007.2:51441816-51470291 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217083 TCONS_00217081 TCONS_00217082 1 XLOC_131414 Coding TCONS_00217083 XLOC_131414 Coding Coding ETF1 7:51468709-51498469 j TSS161747 3964 1 TCONS_00217083_4 437 11 0.867166235424577 5.39053051331528e-08 4.68654164086457e-07 3.66899163002391e-08 2.9688135012903e-07 5.98464059418002e-05 1.79477048416736e-08 1.82696891114747e-08 7.59381345243584e-08 0.000117734294680675 5.32513525357385e-09 0.000250460669530057 0.000765513159023904 0.000275741810395536 7.42792861504359e-05 0.000362803099382935 0.0296978355217651 0.0154946509716356 0.0368386797213498 4.43964829495868e-08 0.000738903718001476 0.000138154929403455 0.014182490601286 0.0147070894742729 0.0181356914429296 2.93537087694682e-08 8.1902797114128e-09 9.05834657938857e-05 0.000664658229230413 1.2452635550587e-06 0.000979015665380292 XM_005209423.1 ETF1 PREDICTED: Bos taurus eukaryotic translation termination factor 1 (ETF1), transcript variant X1, mRNA. 0.0 6765 100.00 0.946014127144299 NM_004730.3 ETF1 Homo sapiens eukaryotic translation termination factor 1 (ETF1), 0.0 5703 93.89 0.946518668012109 TCONS_00217083_4 sp|Q0VCX5|ERF1_BOVIN ERF1_BOVIN Eukaryotic peptide chain release factor subunit 1; 0.0 897 100.00 0.997711670480549 3 coding 0 1 1 1 -0.0712462563030876 0.68835861888153 0.0128816185053001 0.804653530738231 CCTCCCTTCCGCCCGCCGACTACCACTCAGCCCCTGGCGGAGGAAGTGATGTCACAGGCCCCATGTGAGCGGATTGCAACACATGCAGCTGCCTGGAGAGAGGGAGCCGGTGTCCTACGTCAGAGCCGCCGCCGCGGACCCGCCGCCGGGGAGGAGCAGCCGCTGCCGCCCAGGACTGGGCCCTTAGGGAGGAGGAGGCGAGAAGATGGCGGACGACCCCAGTGCTGCCGACAGGAACGTGGAGATCTGGAAGATCAAAAAGCTCATTAAGAGCTTGGAGGCGGCCCGCGGCAATGGCACAAGCATGATATCGTTGATCATTCCTCCCAAAGACCAGATTTCACGAGTGGCAAAAATGTTAGCAGATGAGTTTGGAACTGCATCTAACATTAAGTCACGAGTAAACCGCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAAAGACTCAAACTTTATAACAAAGTACCTCCAAATGGCCTGGTTGTTTACTGTGGTACAATTGTAACAGAAGAAGGAAAGGAAAAGAAAGTCAACATTGACTTTGAACCTTTCAAACCAATTAATACGTCATTGTATTTGTGTGACAACAAATTCCATACAGAGGCTCTTACAGCACTACTTTCAGATGATAGCAAGTTTGGCTTCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACACTCCAAGGAAATACAAGAGAAGTCCTGCACAAATTCACTGTGGATCTCCCAAAGAAACATGGTAGAGGAGGTCAGTCAGCCTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACATAACTATGTTCGAAAAGTAGCTGAGACTGCTGTGCAGCTGTTTATTTCTGGGGACAAGGTGAATGTGGCTGGTCTCGTTTTAGCTGGATCAGCTGACTTTAAAACTGAACTAAGTCAATCTGATATGTTTGATCAGAGGTTGCAATCAAAAGTTTTAAAATTAGTTGATATATCTTATGGTGGTGAAAATGGATTCAATCAAGCTATTGAATTATCTACTGAGGTCCTCTCCAACGTGAAGTTTATTCAAGAGAAGAAATTAATAGGGCGATACTTTGATGAAATAAGCCAGGACACGGGCAAGTACTGTTTTGGAGTTGAAGATACACTAAAGGCTTTAGAAATGGGAGCTGTAGAGATTCTAATAGTCTATGAAAATCTGGATATCATGAGATATGTTCTTCATTGCCAAGGCACAGAAGAGGAGAAAATTCTCTATCTAACTCCAGAACAAGAGAAGGATAAGTCTCATTTTACAGACAAAGAGACAGGACAAGAACATGAGCTGATTGAGAGCATGCCCCTTCTGGAGTGGTTTGCCAACAACTATAAAAAATTTGGAGCTACGTTGGAAATTGTCACAGATAAGTCACAAGAAGGATCCCAGTTTGTCAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGGAGATGATGAATTTTTTGACCTTGATGACTACTAGGTAGTCGACATGGGTCCGGCAAAACGTGCCTCACCCTCCAGCATCCAACCCAAGGAGCATACCCGTGGTGGAATCCAAACAGATCCCTGCCTTACAATTGGAACATTTCCGGAACTTAATCCATGAGCATTGGATATTGAAAAGAAAACCGAAACAAAACCAGACCCAACCCTACACTTTGGTTTGTCATGGTGTCAGCGCAGCAGCCTACAACTAGTTCCTAAATGCCACTTTGGACTAATTTAAAAAAGAATCCCAGTTTTTACTTTTACTCGATGGTGAAATTGGTTGCTCTTGTATTTTATGGGGAAAAAACAAAAAGATTTTTTTAACCTTCATACATAGAAGCAAAAATACTTTAACTGCTGTAAACCTTCAAAAGTTAATAGAAATGAGATATACTGGTTTGTTTCTTATTTTGATTGGAGAAAAATTAAATTGCTGCATTTCGCAGTGACCCATTTACATGGCATTCTCAGCTTAGACTGCATAAGAAGAAATATATGTGGTGAAATGTTGGAACCATTTCTCTCGGTCTCTGTTTAATGTTGAAAGGGTGAGCTAATAGGCAATTTCAACTTCACTCCCTCACATTACCCGTCCCCTCCAGGCTGTCAGTTTCAAGGATGCAGATTGCATTGCAAAGATAAACTGACACATGAAGCATTTGGGCCACTGCTCTGTTTCCTTCCATCTGTTTTGCAGGCGCATTTGCGCCCAGGGTTTGGGAGCCCTTACCATCAACTGCTTTGACAAAGGTTCACATAATCTTGCATACTAGAAACCAGTTTGGGATGGATATGATGGGACTTCTATGCTATTGCTGGAATTGGGAGAAATAAAACATGCAATTTTAAGTGGAAGCAAAGATATTTAAATATTTTATTTTGCTTGGGTCTGTCCTTGCAAAAGGGAGGTGGTCGTGTTTTCCTTGTGTTGGATGGCATGAGATTATGTGAATGTTTTGATTTTTAAAAAATGAACTGCAAGGTTTTTCACAGGAACGACAGACGAGACATGTATGACTGTGCATGTAATTGTAAACCCCTGACCTCCTGGTGGGGTTGGAGCATCTGTTTCAAATATGGGACTTACAAGCACCTCTCATAGGAGAAATTATGGGAGGAGGGTGGGAAGGGCAGGGGTGGGAAGGGATGGGGACACAGCTTCTGGCACCAAGGACTTAACCATGTTGGACCCAAAAGTGGGCCTGAAAACCTGAAGCTTAGGCTTCACAGCTGGGTTGTAAATCAGACTTGACCCCAGCAAACATGCAAGGTCACGGACAGGGTGCCTGAGGTGGTGACAGTGAACAAAGTGTATAGGACGTGCCCAGTGGTAGCAATGGAAAAAAGTATACCAAATGGACTTTGAAGGACCAAAGGTTTTAAAAGTCGATTGGTATCACCCCACACTGCTAGGGTAGTGGGGTGCATTTGATTTTCAAATTGGGTACTTTTAACACTTTAGTGCCTGACTGCTGTTCTTCACTGACTTGACTCAGTCACTCGTAGCTTTATTGGTCTGAACCAGCTCCTTGTTCCCAGGTTGCAGACCTGCCTATCGTTCCAGTAATCCTGTTTCACTTGAATGAAGGGAGTATGTCTTAAATGTAAAGCTTCTGGTTCTCAACACTGTACTCTGAGGTCCAAATGACTGTCTGTCAATGTATAACCTGATGTCTCAACCCCCAGTAAGAAGAGTCAGTTCTTTGGTATTCACCAATGCGGGAGGCTTCACCAGAACAGGCTTTTTCTTTGGGCTCTGCTGTTTGTTTGCAGAACACCCAAGAGTGAGCAAACATGCTCTCTTCATAGCAGTACCTTAGGGTTTTGCCATTGTAAATGGGTCTGATGTGATATATGACAAGATCAGAGAAATTGGATGTAAATTTACATTTTTGAATATGCTTGTTGTTTCACATGATACATTTAGGGTATGCAGCTCCTTTTGTAGTTTTTATTTTTACTATTTAAGTTTGGAAATGATGCCAAATTTTTGTATTTCTTTAATCAATGTGTTCTCTTCAGTGATATATATTGCATTATATATTGATGTGTGTATCAATATATACTGATATGTATTACACTTACACAATACAAACACATAAGAGGGGGTGAAAACCGTAGCATTTGCATTCTCTATAGCCTCTACAGAGAGATCCTAAACAGCAAACTCTTGGTGTTGTGATGTACAGAAATGGAGAAGAGTATTAAACCATATTTAAGAATATACTTCGTGTGCTTGAGATTTTTTAGGACTGTTCTAAGAAAGGTCTGAGCCGTGGAGACAGTGTGAATGAGCTCTCCAAAGCATGTGCAATTTCCTCAGTTACTTTTCAGCCATAGACTTAGTTGTCTAATGCTACATTTGCCTATGGAAGTGTATATGCAAAAGGCCGTGATCCCAGTGTTAACGCCAGAGGAAAGAGGTTCCAGTTGCTGG EMBV3_11718 TAGGGTAGCCAGTAGTCACTTCCTTATGTGCACCCCACAACTAGACCACTCAGAGATGTT Gene BVV0102_149679 + 0 NULL GK000003.2:72478767-73111653 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00153219 TCONS_00253025 TCONS_00063037 TCONS_00185807 TCONS_00141421 TCONS_00109859 TCONS_00231487 TCONS_00022065 TCONS_00198816 TCONS_00007442 TCONS_00007360 TCONS_00023615 TCONS_00252354 TCONS_00238326 TCONS_00064811 TCONS_00175545 TCONS_00222115 TCONS_00040583 TCONS_00152636 TCONS_00065249 TCONS_00032143 TCONS_00177280 TCONS_00116101 TCONS_00072815 TCONS_00020651 TCONS_00206861 TCONS_00064927 TCONS_00071861 TCONS_00148279 TCONS_00124110 TCONS_00040698 TCONS_00080765 32 XLOC_092984 XLOC_155966 XLOC_037764 XLOC_111860 XLOC_085849 XLOC_065763 XLOC_140976 XLOC_012736 XLOC_120469 XLOC_003003 XLOC_002921 XLOC_014282 XLOC_155295 XLOC_144993 XLOC_039535 XLOC_105326 XLOC_135424 XLOC_024399 XLOC_092401 XLOC_039971 XLOC_018386 XLOC_107054 XLOC_070270 XLOC_044583 XLOC_011326 XLOC_125381 XLOC_039651 XLOC_043631 XLOC_090161 XLOC_075662 XLOC_024514 XLOC_049649 Coding TCONS_00063037 XLOC_037764 NonCoding NonCoding - 15:8700042-8700951 - TSS46780 909 0.998899889988999 1 0 3.80847090780349e-05 2.44695019285541e-05 1.8457197703753e-05 2.51179503794913e-05 9.04546132526518e-06 2.32193769282951e-05 1.64975398033572e-05 1.75842569893548e-05 2.56267651153105e-05 0.000146096379931976 0.000101060224371271 0.000214051974557344 6.78447093328644e-06 3.43566047738237e-05 4.69382443873928e-05 0.00253571577287287 0.00027376285761758 0.000505656064863299 2.9883817969713e-05 6.88444554198638e-05 1.05362694077077e-05 0.000874691927414894 0.00367093825306501 0.00196482493802574 3.59891260097828e-05 5.80056308524243e-05 1.95955032868978e-05 0.000534130511068097 0.000243717524764884 0.000607393760096817 XM_005223911.1 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant X2, 2e-29 134 92.39 0.1001100110011 0 noncoding 1 1 1 1 -0.0908368316309159 0.525742476738855 -0.0148602594801673 0.803029043356466 GAGCAAGAATACTGGCTTGACTGCTCTCTCTCCCTTTAGACTCTCCTTTTCTCCACAGGTCGCCTGTGTCTCCTCCCTAACCCTTCTCTACTCTACCCAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCATGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTACCCCACTCTCTCCATTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCATCGTAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACTGATAACCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACAAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCACTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCTACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCTGAACGAACCCACACACAGTGAGGAAATGCCACAATAAAGAGAACTCCACAA TCONS_00060538 . 5' 91932 TCONS_00060538 . 5' 91932 EMBV3_02639 AACTGTGAAGTGAGGATCTTTCATGAATCGTTTCTCAAAGTGCGATTATCATGACATGCC Variant GeneID:504615|FETUB:NM_001034218:48_cdna 442^529 2 EMBV3_38407 GeneID:504615 1 GENE FETUB MGC128051 fetuin B EMBV3_02518 TTTGCCATCGGCTCCCAGGTGTCTGAGCACAGCATCATCCAGGACTTCACCAAGCAGAAA Gene GeneID:506970|MCM5:NM_001075290:16_cdna Constitutive 0 NULL GeneID:506970 5 GENE MCM5 NULL minichromosome maintenance complex component 5 EMBV3_24677 TGGAACAGTCACCTCTAGGGAGTGAGAACTCCAGATTGGCTGTGAAGAGTTACTTCCAGC Gene GeneID:517108|LOC517108:XM_002689559:56_cdna Constitutive 0 NULL GeneID:517108 8 GENE LOC517108 NULL similar to interferon alpha-8 EMBV3_04275 TCTGACTTACCTCTAGTCTCATTTCCAGATTTGGAAATTTGTGCAAAATTAAGTGCACCC Gene BVV0102_363086 + 0 NULL GK000002.2:125830819-125899098 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34559 CAGTACGACCTCTGCTGAGAACAGCGAAAGCTGGAGATGCATGTACCTTATGAGTCAGTG Gene BVV0102_159748 + 1 EMBV3_29707 GK000018.2:7549286-7719671 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088239 1 XLOC_053026 NonCoding TCONS_00088239 XLOC_053026 NonCoding NonCoding - 18:7704891-7705475 - TSS65585 584 3 TCONS_00088239_3 52 0.63527397260274 1 0 0 0 0 0 0 0 0 0 0 0 7.8396737883454e-06 1.83682603546947e-05 0 0 0 0 0 0 0 0.00060339146820006 0 1.27066177567079e-05 0 0 0 0 0 0 0.000340819965206998 0.00201780887315877 XR_228412.1 LOC101902820 PREDICTED: Bos taurus uncharacterized LOC101902820 (LOC101902820), 0.0 1054 100.00 0.998287671232877 0 noncoding 0 0 0 0 -0.0855231595766904 0.57081037937142 -0.000922341930180121 0.984422274505248 CCGTAACGTGCTTTTATTATTCATGATCAGATTAGGGAGACACATCCACAGGCATATGTGAAGTTTCAGCTCACACATTTTCACAGATGTATCCCAACACATGATGAACGTACTCCTTCATCCTCCTGGTCACCACTTCCGATGCTTTTTTTTTCCTTTCACCACTGCAGAGAAAGCTGCTGTGAACATGCCATTGATACCTGACTGGGTGTATTCCTAGGAGGGTTTCTTTGGGGTGCATGAGCAGGAGTGGCGTCACTGACTCATAAGGTACATGCATCTCCAGCTTTCGCTGTTCTCAGCAGAGGTCGTACTGAGCTGTATCTCCACCAGCTGTGCACGACGATTCGGTCCCTCCACACTCTTGCCAACCACACGTCGGATCCAACTTTGAAATGAGTTGGTCCTATAAATCTTTTTTCAATGGCCTGTCGCTCCTGCTGGTCTCCAAACTCTGTGTAGGCCAAGGCAGTGTTTCTGTCATTCACTCCCAGCCCCCAGACAACGCGTGGCACTTGGTAGGTTTCATGAGGGAGAGCTGGGCTAGATGCTGAGTTTTTTGAGGGCAGGGTCCCGGCCTTCTT TCONS_00085319 TCONS_00085320 TCONS_00085321 TCONS_00085322 TCONS_00085323 TCONS_00085324 TCONS_00085325 TCONS_00085326 TCONS_00085327 TCONS_00085328 TCONS_00085329 TCONS_00085330 . 3' 14192 TCONS_00085319 TCONS_00085320 TCONS_00085321 TCONS_00085322 TCONS_00085323 TCONS_00085324 TCONS_00085325 TCONS_00085326 TCONS_00085327 TCONS_00085328 TCONS_00085329 TCONS_00085330 . 3' 14775 EMBV3_08792 TAATGTTTTTAATTCCCTTTTAACCCAGTATACTAGGTCAATCAGGAGGCATCTAGGATT Gene GeneID:513906|DDX6:NM_001143867:110_cdna Constitutive 2 NULL GeneID:513906 15 GENE DDX6 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 EMBV3_23071 CAATGAGAACCTGGCTAAGGCATTTATTTTGAGTATAAAAATTTTAAATGGCTATTTGAG Gene BVT0102_290527 + 0 NULL GK000023.2:31589941-31604876 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133186 1 XLOC_081053 Coding TCONS_00133186 XLOC_081053 Coding Coding LOC787269 23:31589473-31602694 = TSS99533 1460 1 TCONS_00133186_1 126 0.28013698630137 2 0.889712556732224 8.71885872706511e-05 0.000547490429760078 0.000221179708309186 0.000233163146628565 0.00032300122954231 7.0578455749527e-05 0.000189136126982126 0.000415631117797646 0.00015807880041419 0.000891969661927214 0.000165175144813436 0.000159553723600754 6.65394516305727e-05 0.000294912610687957 0.000346259638828808 0.000875457652482097 0.000608284128462996 0.0020999334576107 5.96389696359175e-05 0.000250123632099288 0.000115170776749087 0.000874982575201744 0.00203429968675125 0.00173284927472631 0.00021020666228792 0.000100430479072677 0.000284867734955724 0.000609152225226295 0.00110878618807836 0.00187690734812786 XM_003583902.2 LOC787269 PREDICTED: Bos taurus histone H2B type 1-like (LOC787269), 0.0 2271 100.00 0.861643835616438 XM_005249440.1 HIST1H2BC PREDICTED: Homo sapiens histone cluster 1, H2bc (HIST1H2BC), 0.0 939 74.68 0.972602739726027 TCONS_00133186_1 sp|P62807|H2B1C_HUMAN H2B1C_HUMAN Histone H2B type 1-C/E/F/G/I; 4e-87 254 100.00 0.992063492063492 2 coding 0 0 0 0 0.0309542744282806 0.856652852294101 0.0416367131685338 0.423829479237596 CATTTATCTTTCTTGTTTTCAGGTTTTAAAATGCCTGAGCCAGCCAAGTCCGCTCCTGCCCCGAAAAAGGGCTCCAAGAAGGCAGTGACCAAGGCCCAGAAGAAAGATGGGAAGAAGCGCAAGCGCAGCCGCAAGGAGAGCTATTCTGTGTATGTGTACAAGGTGCTGAAGCAGGTCCACCCGGACACTGGCATCTCGTCCAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGTATTGCGGGCGAGGCATCGCGCCTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCTGTGCGCCTGCTGTTGCCCGGGGAGTTGGCCAAACACGCCGTGTCCGAGGGTACCAAGGCTGTCACCAAGTACACCAGCTCCAAGTAAACTTGCCAAGAGGAGCAAATGGGCTTTAGAAAAGTATTTTCCCACTACTGGTCACCGCTGGACTTTATTATATCTCAAAAATAAGTCAATGAAAATGACTGATACCAGAAGCAGATAAAAGATATTTTCAACAATCATAGAAAAATCAATGAGAACCTGGCTAAGGCATTTATTTTGAGTATAAAAATTTTAAATGGCTATTTGAGAAATTTGCAAGAAGAAAAATACATAACAGAAAATTAAATCTTAGTATCTCTTTTCTATATGTATATAAGACCTATGAATATATAAATATGAACATATATGAGATTCACCTATAAAAATATATGTCATTTAAAAACCAAATTTAAGTATCATGCTATGTATGTACATATATCGAGTTTTCTAGGTAATATGCCTAGAAACACATTTTTTAATGGGTATATTATTACTTATGCAAGTAGTCCTCTGTTACTGGCTATTTAGATTGTGTTCCATTTTTATGCATTATAAATCATATAGGCCACACTTCTTTGTATGTAAATCTCTGTTTAAATATTTATTTCCTTAGAATAGACTTCTGGAAGTAGAATACTAAATCCCAAGGTAAAATCATTTTTTAATGTTCTTAATATATACATTGTCAAATTGCCTTTCAGAAGGACTGTGCCAGTTTATAATCCCAGTATAATTTAAAAATTCTTGTTTTCATAGCTGTCATTTTTACTGAGAACACTTTTAAAGCATTGTTAACCAGATAGATTAAAAAAAAATTGAACTGTAATTTCCTTTATTATGAATAGAGGTAGTATTTTTTCCCATGCTTTTATTAGCCATGACCCCATAAAAAATAAACTGCTGTAAAATAATGGACGTGCCTGCAATCATTCCATGGGAAATCACCGTGTAAAGAATAAGTAGGTAGGATCTTAGGTTAAGATCAAGAAACAACTATTTATCAGGTGCCTCCTCTGTCCAGGACAATGCTGGAATAATGAACCATGTTTGGCCCTGTGTAACTAAAACTGCTTTTACCTACATTGTTTCATATAAGCCTCCTAACCAGTACA EMBV3_39744 TCCCGTGTATGGCTCTGTGTCCAATGCAGACCTGATGGATTTCAAGAATTTGCTGGACCG Gene GeneID:281355|NPPA:NM_174124:10_cdna Constitutive 0 NULL GeneID:281355 16 GENE NPPA NULL natriuretic peptide precursor A EMBV3_19216 GGGTTTCAAGTTTCCCAAAGGTCCGGCCTCCACGTACTTTAAATGACTTTTTCAAGGCAG Gene BVV0102_158554 + 1 EMBV3_08741 GK000010.2:93651773-93679125 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28121 CACCGAGCATGCCAAGCGGAAGACAGTCACCGCTGTGGACGTGGTCTTATTTAAAAAAAA Gene GeneID:100337473|LOC100337473:XM_002686690:111_cdna Constitutive 0 NULL GeneID:100337473 4 GENE LOC100337473 NULL GJ17461-like EMBV3_43247 CAGGAGGCCGTGAAGAAGGGCTCGACCGCGGCCTCACTGCTGATGCAAGAATAGTCATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04576 ATTACTCTGTGCTTTGGGGCCTGTTCTTTTCTCCTTGATGAGGATTCTAGCAGATGTTAG Gene BVT0102_231534 + 1 EMBV3_30780 GK000007.2:27418958-27491081 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219778 1 XLOC_133097 NonCoding TCONS_00219778 XLOC_133097 NonCoding NonCoding - 7:27458925-27460610 - TSS163776 1685 2 TCONS_00219778_3 72 0.110979228486647 1 0 0.000153417370304601 0.000363770460788019 0.000274599976887795 8.87089812808276e-05 0.000164083953126044 0.000125249733139773 0.000276876946462851 8.42452986431033e-05 0.000899053310486855 0.000568947492048503 4.61911727534522e-05 8.48829044979645e-06 6.81136413858278e-06 0.000823548330501708 0.000177613321785269 0 0 0 0.00017235764846847 0.000537756077795056 0.000333299441682627 0 0 0 0.000148026772211246 0.000150526385768529 9.73626961849778e-05 5.7004020199625e-06 8.64320679484005e-06 0 0 noncoding 0 0 0 0 -0.0230295969542022 0.858946527015858 0.0233282419338271 0.715770102980125 AATTGGCAGTCCTACAAGAACTAACCAATTATTTTTTGATGGAAATTCTTACTGGTTTATAAAATCTAAAAGCATAGAGACCTTCTATCTAAGTGACCTCTGATAAATTATACATTGAATGTTTTGTCAGGTGGCTATTCCAGAACTATGTTCCCTGAATTCCCCTGGACTAAGTCCAAGATGGACTTGAATTCAATATCAAGTCACTTTAGCACAGTTCCAAGATACTGTTATTCTGGACAAAACCCCACACTTGTAAAGGTCGACCTTTTACAAGATCGACCTTTACAACCTGTGAAAGGTTAACTTCTTTTCCATTTCCATAGCATCACCGATAGAGCAGAAGAAAAAGGTATTTGAAAGGAATCGTTGATTCAGGTTTTAATTTTTAAAAAGATTGTTGGCACGAAAGTTAAAGAGAAATGGCCGTATAACATATGATAGCTTCATAAATATAACTTTAAATAATGGCTTACCTAAAACTCTTAATAGGCCAACTAATTTTAGTTCAACTGAAAGTGATTCAATTCATTTAAGTTCAAAAAAGATTTACTGAGGGCTCACCATTTGCCAGGTACTGTGCTAAGCGATGGGGAAATAGGTTGTAACCAGACATTCAGGATTAACACCCTCACCAGACACTCAGTTTAGAATTTCTCTCCAATACAAAAGTCCTGGATTTAGTTTTATGTGAAAATGAATGTCAAAAATTTGGTTAATTGAACATTTTTATGCTCACTCATAATATATTACTCTGTGCTTTGGGGCCTGTTCTTTTCTCCTTGATGAGGATTCTAGCAGATGTTAGGAGGAGGTAAGAGAAGTTCTAACTTATTTTCAAATACCCCAGGTCTATCTCAAACAATAGTGCTTGATAAGTTCTCACAGACTGTGAACGGATAATATTAGAGGAGAAAAGGGACCTAGGAAATAGTTTGTATCTTTTATCATTTAAATTAAAGTTAGCAGTAAAACAGGTTCTGGGTTACAGGAGACCTGAATTTGGGTTCATATTATATTACAGAATGTGTTCTGTGACTTAAAATAGCCCTCTGGCATTTTGATTTTCATGGGTGGATTTCTTAAAACTTTGGGTATCACAGACCTCTTTGACTAACAAATGATATCTATCAATTCCCTTACCAGAAAAAAAAAAAAAAAAAGCCTTTGTACATGCTTTTGCACACACACACACACACACACACATGATAAGTACACAATTTTGCATTTACTTTCAAGTTGCTTAAGTGTTTTTATCAATGCTATTTGTGTAACCCAAATTATAAATTCCTTATTTAGAGGGAATAGTGTATTCCAGCACCTTTACTCTGTATCCTAAAATAAAATAACATGTTAATGAATGAGGGTATGAATATGTTATTGTTGCCTCTATTGTAAATCATGCAGATAAACAAGTGAATAATCTGCTCTTCCTAGAGACGTGCCCCAGACTCAAAAAAATCAGAATGGCTCTTCTCTTTGGACAGTAGAGCAAGTAACATACACTCCAGGGAAGCCTGGTTCTTGTAACTGAGCCACACTAGTAAATTTGTCATGTTGACTGTGAAATAAAGATTTTAATAATGAGAATATATTTCTTTCATAATAGAAAAAGAGAAAGGATGTAGCAAGGTGATTTGCTGTTAAAAGTGATTTTTTTTTCTGTATAAATCATGATTATTTCT TCONS_00212645 . 5' 30472 TCONS_00212645 . 5' 30472 EMBV3_36463 TAATGTGGTGCAGTTCCACTAATAGTATAGTTTGATAACTTGTTTAGTAAGTTACTGGGT Variant GeneID:518111|SLC30A6:NM_001075766:20_cdna 230^272 2 EMBV3_38061 GeneID:518111 11 GENE SLC30A6 MGC143281 solute carrier family 30 (zinc transporter), member 6 EMBV3_26248 TGGGCCAACAGAGGCAGGAATGGAAGGATTGGTTGAGCAGACAAGGAAAGTCAGCGTGAT Gene GeneID:539442|FOXI1:XM_002696245:38_cdna Constitutive 0 NULL GeneID:539442 20 GENE FOXI1 NULL forkhead box I1 EMBV3_13690 CTTACTCAACATCACCGAATTCATATGGGGGACAGACGTTATAAATGTACGGAGTGTGGC Gene GeneID:100337365|LOC100337365:XR_083946:16_cdna Constitutive 0 NULL GeneID:100337365 18 PSEUDO LOC100337365 NULL zinc finger protein 502-like EMBV3_10221 AGTACCTGTTCGAGCGGACGTTCAACCTCAAGTTCATCCGGCCCTTCATGCAATACAACA Gene GeneID:518563|HS6ST1:XM_002685207:69_cdna Constitutive 0 NULL GeneID:518563 2 GENE HS6ST1 NULL heparan sulfate 6-O-sulfotransferase 1 EMBV3_06753 AAGATTTCACGACTCCCCAGCACGAGAAATGCTTCGCAATGTCCAAGACACCCAAGACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39658 ACAGGGAAGCAGAAATGAGAAACAGTATCTTAGCCCAAGTTCTGGATCAGTCAGCCCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32946 GGTAGCTCTGCGCGAGATCCGCCGTTACCAGAAGTCCACTGAGCTACTGATTCGCAAGCT Gene GeneID:539875|LOC539875:XM_002697472:116_cdna Constitutive 0 NULL GeneID:539875 23 GENE LOC539875 NULL similar to histone cluster 1, H3f EMBV3_05969 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40083 GCCTTTCTTCTGCCTCCTGGGCTGGGAGAGCTGGAGAGAAAGGCCAAGCAGACATCAGCT Variant GeneID:617313|GZMH:XM_002696688:371_cdna 55^336 1 EMBV3_28065 GeneID:617313 21 GENE GZMH NULL granzyme H (cathepsin G-like 2, protein h-CCPX) EMBV3_40360 CCAAGGATAAGCACTCTGGGATGGAAGCCTTTGGAGGAGAAACTGTGACCTCTTGGCAGA Gene BVT0102_080215 + 0 NULL GK000022.2:55714649-55773451 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127501 TCONS_00127505 TCONS_00127508 TCONS_00127506 TCONS_00127507 TCONS_00127502 TCONS_00127504 1 XLOC_077667 NonCoding TCONS_00127505 XLOC_077667 NonCoding NonCoding - 22:55742432-55745126 - TSS95348 2694 1 TCONS_00127505_3 138 0.687453600593912 1 0 0.00582081146083296 0.00389559683417794 0.00402868610548414 0.00416492412755145 0.00389793427164409 0.000729772623934011 0.00185582312253771 0.000495101686987104 0.000665787439887522 6.84714911165344e-33 9.2344555852309e-24 0 3.53422623491978e-06 2.39199172120106e-11 2.37631486443265e-15 0 0 0 0.0016325188363558 0.00535420585375737 0.00102066653091114 0 0 0 0.00415876021420539 0.00325819123070334 0.00190478071581365 0 0 5.98969942240413e-33 XR_227505.1 LOC101903555 PREDICTED: Bos taurus uncharacterized LOC101903555 (LOC101903555), 4e-36 158 72.45 0.115070527097253 NR_026777.1 ZNF37BP Homo sapiens zinc finger protein 37B, pseudogene (ZNF37BP), 3e-19 102 67.73 0.11358574610245 0 noncoding GTCAGCCCACTGGTTGGAGTTTGCTGGTCCGTGGTCTAGACTCCAAGTTCCTTAAAGGCAAAGGCCTGGTTATATTTCAGCCATCCATCTCTAAGTCTCCCTCCAAGCTTGGCTGAGACGGAGGGAAATCTCAGCAGATGATAGCTGGCTCTGACTCGCTCTCTCCATCTGCCCTTTCAATTTCTTTCCCTCTATCTCCCTCGAACCACTGCAGTGTCACCAGGTCTCAGCTTTTCAGAATCCCAGGGCAATCAGGCAAGGAAAAGAACCTCTCGCTCTGGCAATCAGCTAATTGAAGTCACTCTTACAGGGCACTCAGCCAGAGAAGGAAGCCTTGCAGTTAATTCATCCTGTCTCTCAAGGCTTAACCCAACCTGGGAGAAGCATTAAATAGAGGGGCCAAGGAAGCATCAGGGAGAGGCCACGCTGCTTCTGTAGCCATGCTTCTGCTCAGGCATCCACAGCCCTGAGCCAGGTTTTCCTCTTCTGCCATTCATCCACACACTACTGCGATATTTCCTGAGCCCCAGGATGCACTAGGCCCAGAGGGCGCAGCAAATGGTCTAACTGGAGAGACAGAAACTAACACTGGCACCGTCGCTGGCACATGGAAAATAGCCCGCAAATTGTTACTGTGCAAATGACCAGTTGAACAAGTGTTGGGGATAAGGCTTGATTCTTCCAGCAGCAAACAGGCACATTGTCCCAAGGATAAGCACTCTGGGATGGAGGCCTTTGGAGGAGAAACTGTGACCTCTTGGCAGAGGGAAGCCCAACCGGTTGGCAGGACTGCTGTCGCCAAAATGAAAGGTGTGAACAAAGACTCCGATTTAAAAATGGGCAGAGGATCTGAACACACAGTCTTCCAAAGAAGACTTATCGATGGCCAACAGGTTCGGGAAAGATGCTCACCATCGCTCATCATCAGGAAAATGCAAATCAAAGCCAGGACGGAGTGGCTATCACCCAAAAGACAAGAAACTGCAAGTGTTGGTGAGGAAGGGCGTAGAGAAAAGGGAAGCCTCGGGAGCTACTGGCGGGCGTGTGATTTGATGCAACGTCCTTGGAAAACAGGGTGGAGGCCCTCAAACAATAAAAACTACCCAGGAATACAGCAACTCCACATTCGGGTATTTATCTGAAGGAAGCAGAAACATTAATTGGAAAAGATCCCTGCACCCCCATGTTCCTTGCAGCATTACTGACAATAGCCAAGAGTTAGAAACAGTTTGAGTGTCCATCAGTGAATGAATGGATAAATAAAATGTGATACTGATATGTGAGATATATATATATAAAATATACATATACGCATTATTGACATCTCTCTCTCTCACTCTCTCACACACACAGAATGGAATATTACTCAGCCGTAAGAAGAAGGAAATCTTGGACTTCCCTGGTGGTCCTGTGGATAGGAGTCCACCTGCCAATGCAGGGGACGCAGGTTCAATCCCTGGTCCAGGAAGACCCTACTTGCCTGGGGACAACTCAGCCCGTGTGCTTAGCGCCTGTGCGCCACAGCCAGAGAAACCACCCCTCCGAGAAGCCCACGTACTGCGTCTAAGAGTCGCCTATGCTTGCCACAACTAGAGGACGCCCACACGATAGCGAGGAAGACCCAGAGCGGCCAAAATATAAATATATACATTTTAAAAAGAAAGAAGTCCTGCCATGTACCACTGCGTGTATGGACCTCGAGGGCCTGTGCTAAGTGAAATAATCCAGAGAAAGGCAAATACTGTGTGATCTCACTTATATGTGGAGTCTAAACACACAAAACTGAGCTCGTGGATACAGAGAAGAAATCAATGGTTTCCAGAGGTGGGGGTGTTGAGAGGTGTGAGACATGAGCAAAGGGCATCAAAAGGTACAAATCTCCATTGTGTACACTAAGAAAGTCATGGGATGTAAGGTGTGGTGACGCATAGTTAGTAACCCTGTGTTGCATATTTGACAGTTGCTAGGAGAGTAAGTGTTAGAAGCTCTCATCACAAGAAAAGAATTGTAACTGGCAATGAAAGTTCACTAGACTTACTGCAGTGATCATTTCACAATACATACAAATATTGAATCATTATGTTGTACGCCTGAAACGGAGGCGGGAGGTGGATGGGCCCCGCAGGCCAAAGCACTTGGAGATTTCATTCCCTGTATCGATCCCTCAGATCGATACTCTGAGACAAGGATAGCAAGACAGTCAGAGGAGGAGGCTGGGCCCTGCCTGGACAGAAGATAGGAGACCACATACATTTCGTTCTCGGAGTCAGGAGAAAGAGACTACACTCTCATTCCCCAGCTACACCTGCACAGAAAGGTCCCGAGGAGGTCAAAAGGGGAGTGATGCTAAGTCTACCTACCCATACGTCCCTTTGGTGGAATCCGTCTTGGCTGAGAGGCATGCAGGCACATGTGAGAGGATCCTGAGATGAACCAAACATGGGCTCAGAGCCAGGCAAGGCCAGATAATTGGCCAAAGGAAACCTGGAAAAAATGCTTCATATAAGTGACTCAGAGTACCTCCATGAGGGTGCGACTCTCTGAGTTCACTCGTGTGTCCAGCCGCACGTATTCTTTTTCCTGCTAATAAACACCTGACTTTTTTCACTCCTTTCTGTCTTTGTGGGATTTTTCCTGCAAAGCTGAGGGGCCAGGGCCTTTATACTGACCTCTATAGTTTGTTTTTGCTTGTAC TCONS_00127499 TCONS_00127500 s 3' 27785 TCONS_00127499 TCONS_00127500 s 3' 27785 EMBV3_41601 ATAGCTGAAACCTGGTAATAATCCAGGTGTCCATGAACAGATGAATAAGCGAATCATGAC Gene BVT0102_130578 + 0 NULL GK000001.2:80506905-80596923 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11174 TGTACACGATGGTCACCCCTATGCTGAACCCCTTTATCTACAGCCTGAGGAACAGAGACA Gene GeneID:786573|LOC786573:XM_002691593:145_cdna Constitutive 0 NULL GeneID:786573 11 GENE LOC786573 NULL similar to olfactory receptor Olfr367 EMBV3_40862 TCTTCTGGCAAAGGGACATCATTCCTGTACTATAGTGTATGTAAATGCACCCTGTAAATG Gene GeneID:505945|SRPK2:XM_002686763:60_cdna Constitutive 3 NULL GeneID:505945 4 GENE SRPK2 NULL SFRS protein kinase 2 EMBV3_33575 CTCCTCAGACTTAACCCAGGGACTGTTTAGGTGCAGGTGAGCTGCCGGCAGTTCTGGCAT Gene BVT0102_065828 + 0 NULL GK000017.2:51244008-51260807 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075389 1 XLOC_046569 Coding TCONS_00075389 XLOC_046569 Coding Coding LOC100847805 17:51251494-51262423 = TSS56862 1874 2 TCONS_00075389_2 176 2 0.828696925329429 0.000209738490900916 0.000135740395205902 9.61792792888398e-05 6.86842433156078e-05 9.01460737439602e-05 1.54293034734787e-05 7.18331653417148e-05 8.82883513990134e-05 0.000121908743274542 8.69318999100625e-05 0.000382813018188432 0.000102684816619297 1.48261513955329e-05 5.14463984819714e-05 2.46968029254503e-05 0.00169215032533137 0.000457935620590829 0.000639898800250765 0.000491406155815189 0.000672353369359401 0.000200303063737694 0.000560211022043662 0.00057765551220067 0.000839542569499765 0.000416625837742052 0.000410431930497466 0.000339469155274171 0.000390627900939749 0.00037074093739843 0.000184883968924429 NM_001078120.1 ZNF280B Bos taurus zinc finger protein 280B (ZNF280B), mRNA. 0.0 3083 97.38 0.975987193169691 NM_080764.2 ZNF280B Homo sapiens zinc finger protein 280B (ZNF280B), mRNA. 0.0 1709 82.36 0.901814300960512 TCONS_00075389_2 sp|Q86YH2|Z280B_HUMAN Z280B_HUMAN Zinc finger protein 280B; 1e-67 218 72.26 0.875 1 noncoding CCAACACCTGGCAACCAATCATCCTTGGCAGCGGACACGCTGGCAGTTGAAGCGGCGTCCCAGGCCTGAGGAGGCGTTGCTCCCTCGGGCTTGCCTCCTCAGACTTAACCCAGGGACCGTCTAGGTGCAGGTGAGCTGCCGGCAGTTCTGGCATCGCCGCCCACGGGGACCGATGGCAGTTTATTTAAAGGAAGCACTGGGACTTGTGGTCACACCCTCCAGGAACAAAAAAGTATTTAAAATATGGAAGCACCATGGATGTCATGTGAAGAAGAACAAGAGCCAGAACCACAGAAAAGCAAGGGAGAAACCAAACTAGAAAATGATGAAGATGCTGAACTCATCTTGGTTGGAGTGGAACATGTACATGAAGATGATGATGTGATCTTTGTTGGGATGACCTCAAATTCAAAACCAGTCATTTCAAACATACTGAACAGAGTTACCCCAGGTTCTTATTCAAGGAGAAATAGGTATGGTCACTTCAGGAAAGACAATGCTCAGATATTACAGCCTGTTAGTCATGTGACTCCTACATCAGAAGCAAAGACTGTCTTGCCAGTTTCTGTCTCTGAATCAAGATCAACAGATAGTCCTATTATTATTGAGCCTTTGTCCAAAGCAGACTATAAAAATATTTCACCACAAATAGTGCCTAATAGCTTTTCAGAGTTATGTTCTCCTTTGATTACCTTCACAAGTTCATTGCAGCATCCAGTAGAAATAGCAGTTTCTGCGGGAGCTATGGATAAAAGTCCTCATGTATCAAAGTGACTTTCCACTTCTGAAACAAATAGCACAAGTCCCAAAAGGCCTACACTCAGTGATGGAATTATAGGAGAACATTCTTTAGCTTTGTCCCTTTCAGGTATTTTTCATACAGTAACTACTCAGCAAAGCACACCAGACAGTGTTCATAACTCATTAAGCCATGTTCAGAGTGGAGAACCTTGTCCAACAGCTTTTCCAAAGGACAATGTGCATTGCAAGCCTGTAAGTCCTTTAGGGGGAAGTGTATTGACAAAAACTGACTTTCCAAGTGTATCAAGTCAAAATAAGTTTGCTGATCCCACAGAAGGCAATCTGATTGTGTTACTTCGTGACTTCTACTATGGACAGCATATAGGAGATGGGCAGCCAGAACCGAAAACTCACACAGCCTTTAAATGCCACAGCTGCTTGAAGGTTCTAAAAAATGTTGAGTTTATGAATCACATGAAGCACCATTTGGAACTTAAGAGGCTGAGAGGTGACAGCTGGAAATACCACACCACCTGCCAGCACTGCCACCACCAGTTTCCTACTCCCTTCCAGCTGCAGTGTCACATTGAAAGTGTCCACACTTCCCAGGAGCCCTGCACAGTCTGCAAAATCTGTGAATTGTCCTTTGAGGCAGATCAGGTTCTCTTACAGCACATGAAAGACAATCATAAGCCTGGTGAAATGCCCTATGTATGCCAGGTTTACAGTTATAGATCATCATTCTTTGCAGATGTGGATGCACATTTCAGAGCATACCATGGTAACACTAAGAATTTACTTTGCCCCTTTTGTCTCCAAATTTTAAAACTGCAGCACTATACATATGTCATTATAGACAGCACTGGGCAAAGAGTTTTCACCAGTGTTCCAAATGTTGGCTACAGTTTTTAACTTGTAAAGAGAAAAGGGAGCACAAGACCCAGTGTCATCAAATGTTTAAGAAGCCTAAGCAGCTAGAAGGATTACCTCCTGAAACAAAAGTTGTTATTCAGGTATCACTGGAACCCCTTCAACCAGGATTGGTGGAAGTAGCATCCATTACTGTGAATGCATCTGATTCTGAACCATCACCCCCCAAATCTAAAAGTAGGAGGTCAAAAAAACCCGGTTAA EMBV3_26422 ACACTTGTCAGGTACTAAGCGAGTTCCCCTGGGCTTTTATCTGCAGCCACCCCAAACGAA Gene BVV0102_184425 + 0 NULL GK000001.2:132068264-132095202 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41381 AGACACTGTTCAAGTCATCAGTCACATTCGATGAAATCGTGGATACTTTGGGTGAAGGGG Variant GeneID:529633|CLK4:XM_002689028:82_cdna 451^541 1 EMBV3_07626 GeneID:529633 7 GENE CLK4 NULL CDC-like kinase 4 EMBV3_22207 GCAAGCTCTGCAAGAACTCTACACCCACATCCACAGGTACTATGACCAGATCATTGGTGC Gene GeneID:504294|PLXNB3:XM_002699723:135_cdna Constitutive 0 NULL GeneID:504294 X GENE PLXNB3 NULL plexin B3 EMBV3_34855 AAGTCATACGATAAGAAGACGGTGGGGACCTGAAGGTAGTGTGGAGAAGAGCCCTCCTTC Gene BVT0102_131594 - 0 NULL GK000014.2:11410844-11761797 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34562 GGGCCTTGTTCACCGAAACTTGGTCTCACCATGTCGTTCTTTCTCTTACCTTCTGGCTGA Gene BVT0101_054918 - 1 EMBV3_34497 GK000005.2:112209094-112226837 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204180 TCONS_00011558 TCONS_00071514 TCONS_00134878 TCONS_00138407 TCONS_00194588 TCONS_00009395 TCONS_00019267 TCONS_00132405 TCONS_00010745 TCONS_00138406 TCONS_00018727 TCONS_00226782 TCONS_00148378 TCONS_00112816 TCONS_00189837 TCONS_00135618 TCONS_00197812 TCONS_00151311 TCONS_00058128 TCONS_00081870 TCONS_00248780 TCONS_00220245 TCONS_00056822 TCONS_00134877 TCONS_00021459 TCONS_00046799 TCONS_00118517 TCONS_00242190 TCONS_00206255 TCONS_00169138 TCONS_00070495 TCONS_00160954 TCONS_00166135 TCONS_00057018 TCONS_00057884 TCONS_00122090 TCONS_00002708 TCONS_00118479 TCONS_00198834 TCONS_00065051 TCONS_00087961 TCONS_00177102 TCONS_00005951 TCONS_00252994 TCONS_00134876 TCONS_00100335 TCONS_00202228 TCONS_00023551 TCONS_00104531 TCONS_00220136 TCONS_00250272 TCONS_00118518 TCONS_00206254 TCONS_00196654 TCONS_00220133 TCONS_00118519 TCONS_00025023 TCONS_00165861 TCONS_00167486 TCONS_00186919 TCONS_00025022 TCONS_00243110 TCONS_00120346 TCONS_00035886 TCONS_00235856 TCONS_00104532 TCONS_00037742 TCONS_00118516 TCONS_00171864 62 XLOC_124364 XLOC_007109 XLOC_043285 XLOC_081568 XLOC_084615 XLOC_117800 XLOC_004951 XLOC_009947 XLOC_080770 XLOC_006296 XLOC_084614 XLOC_009409 XLOC_138080 XLOC_090260 XLOC_068711 XLOC_115874 XLOC_081841 XLOC_119473 XLOC_092080 XLOC_035925 XLOC_050747 XLOC_151723 XLOC_133562 XLOC_034625 XLOC_012132 XLOC_026938 XLOC_072652 XLOC_148854 XLOC_124865 XLOC_103286 XLOC_042273 XLOC_097847 XLOC_100973 XLOC_034820 XLOC_035681 XLOC_073646 XLOC_000664 XLOC_072637 XLOC_120487 XLOC_039775 XLOC_052749 XLOC_106876 XLOC_001514 XLOC_155935 XLOC_060578 XLOC_123873 XLOC_014218 XLOC_062403 XLOC_133453 XLOC_153215 XLOC_118400 XLOC_133450 XLOC_014641 XLOC_100701 XLOC_102322 XLOC_112967 XLOC_149773 XLOC_073143 XLOC_021016 XLOC_144309 XLOC_021571 XLOC_103929 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_01646 CAGACATTCTGGTCACATACTCCATCAGAAGGGCTTCCCAGGTGGTGCTAGTGGTAAAGA Gene GeneID:281449|RDH8:NM_174167:279_cdna Constitutive 0 NULL GeneID:281449 7 GENE RDH8 NULL retinol dehydrogenase 8 (all-trans) EMBV3_43057 GTTACTATCGGTATTACAACAAGTACGTGAACGTGTTTTTAAACTACTGCCGCTCTTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06775 CAAAAATACTTTCATGCTTTCCTTCGCCAAGAGGGTGAGGACCAGGATGCTGAGGCAACC Gene BVV0102_192157 + 0 NULL GK000005.2:111123048-111180166 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201700 1 XLOC_123345 NonCoding TCONS_00201700 XLOC_123345 NonCoding NonCoding - 5:111174774-111176415 - TSS151268 1641 1 TCONS_00201700_2 88 0.23217550274223 1 0 0 0 0 0 0 0 0 0 0 0 1.16249375236533e-07 0 0 0 3.73720204020683e-07 0.000563318735628018 0 0.000122320278299197 0 0 0 0 7.82673704958696e-05 0.000255402646527528 0 0 0 0 0 0 XR_231253.1 LOC101909563 PREDICTED: Bos taurus uncharacterized LOC101909563 (LOC101909563), 0.0 848 100.00 0.285801340645948 0 noncoding 0 0 0 0 -0.0344394570873101 0.827200057502543 0.0496116155362894 0.337723150975958 AGACAGCCAAAAATGAAACCGAATCTGAGCCTGCAGCGTGGCAAGTTATATCATTAGCAGATGCCATGGCTTTCATCAGCTCTGCTCCGTGGACATCAGATCTTTGGGAAACTGTGAGCTCCGCCTTTGTATGGAGCCACGTGGGAGGGTATGGGGTAATGCTGAATCCCTCCCTGATCCCCCATGCTCACTGAACTCCCTTGAGAGCTGAAGCAACTTCTCACTGTCTGATGATGCTGGCCCTGTCCAGGGCCCATTTAACGAGCCTCCTGTGTCCCCCCATCCTTCAGGGTCTTCGGATCACAAAGCCGTCCCCAGATGGCCAGTGGGATGGGGCAGCACTGAATGTCAACCCCAAATCAAATTTTGGGCAAAACTTTGCCCAGATGTTATTTCATATCATCAAAAATCTAGAGACAATCTGTGAATGGACTGACCGAGACGAATCTCAAACAGCTGTACCTAGTGGCAGTGCTGGATTCGGGGTGTCAGACTGATCAGCTGGGGTGGCTCTAATTGTTTTCAGGATTGGTTTGTTTTTCACAGGCATGCTGAAGCCTGACCCAGCGATGGCCCACGCTCACTAAGGCAGGGATGGCAGAGATGCCAAGGTGGAACGAAGAGACAGCTGTGTGAGTTAACCGTGGGTGACCCATCCCACCTGAGGACATCTCAAAATACTTTCATGCTTTCCTTCGCCAAGAGGGTGAGGACCAGGATGCTGAGGCAACCCAACAACTTTCAAAGGATTTGGTGTCCAGGTGCGGAGTGCTGCCGGTGATCTGACTCCTGATTTCTGGGGGAAGGCGGAGTAAGGGGGCTCCTAGCCCTTGGGAGGGCAGAGGCCATGGCAGCCATGACTGGCCATCACAGCAGCAGGACCAGGTGGCCATCCCAGTGGTCTGACCATGAGGACGGGTGGGGTTAATGGATCACAAAATCCCCAGGGCAAACATGGATCAACGACCCACAAGGACCTAAGGCTTTTCTTTTAAAAAATAATTTATTTTTGATTTTTCGGTTGTGGTGGGTCTTCATTCCTTTTGCACAGGCTACTCTTTGCTGTGGTCCGAGGACTTCTCATTTCAGTGGTTTCTCTTGTTGCCGAGCATGGACTCGAGGTGTGTGGGCTCAGTAGTTGCGGTCCACGGGCTTAGTTGCTCCACGGCGTGTGGAATCTCCCAGAGACAGGGAAGAAACACGTGCCCCCTGCATTGGCAGGTGGATTCTTATCCACTGCACCACTAGGGACGTCTGGACCTAAGACTTTTATAACCCGAAAGATCTGGGTCTGCTAAACAGAGGTCTGACTTGACAGAAATCAATGGGTGGTCCCATCCCCATCTCAAAGCCAAGTCCGTTCGCAGACCCAGAGCTCCCTGAGCAAGGAAAGGACCTGATATTGCACTCCGAGTCGGTCCCATGCATCTCCCCAAAACATTCCCCCAAGGGGACCATGGCCATTTATGGAAGAACTATGCCCTGGGGAGTAGGAGGGAGGTAGGTCTGAACCTCGCTGAGTCCTTGTTTCCTCATCTGTAACGGAGGACAATAATATCTGCCTGAAAGGATTGTGGGGTTAATTGAGTAGAATAATGGGGCAGTGCCTGGAATATAAATGCACGCTCTGGCTGCAGCTGA TCONS_00196470 . 3' 3752 TCONS_00196470 . 3' 5392 EMBV3_23494 AACCCTTTCTCAGAAGATAAGACAGACAAGGTGAACGGCTGGGACATGACCATGGTCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22250 TCTCAGAGACAGGAAACTCACCCAGAACCTACACAGTGCGACCTGCCCTCATGTCAGCAG Gene BVV0101_027485 - 1 EMBV3_39750 GK000008.2:23279893-23287272 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00230203 1 XLOC_139695 NonCoding TCONS_00230203 XLOC_139695 NonCoding NonCoding - 8:23159761-23160255 - TSS171707 494 1 TCONS_00230203_1 45 1 0 0 0 0 0 0 0 0 0 0 0 0 3.61911580002723e-06 0 0 0 0 0 0 0 0 0 0.00393065658952653 0 0 0 0 0 0 0 0 0 noncoding AGGGCTTTGCTTTGGGCTGTTTCACTGTAAAGATTTGGAAACTGCCTCAGAGACAGGAAACTCACCCAGAACCCACACAGTGCGACCTGCCCTCATGTCAGCAGGGTGGGGCAGGGGCCCACGGAGGCTTGTTCAGCAGCTGCAGCCAATGTGTTGTCCTTTTAACTTTCTTCTCAACCTTAGGTTGGCCCGACTCAATGCAGCCCTGACAATGACTATGAGAATTAAATGAGTTCAGCTCATAGGACGGCCTGGAATCTGAAGGGAAAAGTAAATGCAGGCTTGATGCAGACACGCATGTTGTGAAAGGGCCAGTCTGAGTGCCCAGCAGCAGCGGGTCTGGCAGCAAACAGTGAAGACAATGCCTGGGCTACTCTTGCCTGTTCCTGGGCCATCGACCCTCTGATGGGAGCATTCTGAGGGTGACAGGATGCAGAGTGTAGGATCCTCTGGTTGGTTATGTTCTGGAGGAGTTAGAAGAGCTAGGCAGAGAG TCONS_00224677 . 5' 5405 TCONS_00224677 . 5' 5405 EMBV3_12974 GAACATCCTCACGCTGCACCAGGTGGTCTTGAAGAAGACACCCGTTATCAGAGAAAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28075 TGTGCTGTTGTCACCTCTGAAAGCTAGTGAATGACCCCACACACTCGGACCTCACTGCAT Gene BVT0102_027079 + 0 NULL GK000019.2:37325266-37444866 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093590 TCONS_00093591 1 XLOC_057190 Coding TCONS_00093591 XLOC_057190 Coding Coding - 19:37429040-37438361 - TSS70164 747 1 TCONS_00093591_1 107 5 0.920386266094421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00219874259743619 0.000488346217168183 0.000637336934196425 2.18964004334812e-10 0 3.96074408368084e-06 0.000407286803421025 7.33422058504216e-05 0.00215448024953531 0 0 0.000243059652184307 2.53077925515428e-05 3.22971430436383e-05 6.4142931668448e-05 XM_005195705.1 TAC4 PREDICTED: Bos taurus tachykinin 4 (hemokinin) (TAC4), transcript 0.0 1342 100.00 0.994645247657296 NM_170685.2 TAC4 Homo sapiens tachykinin 4 (hemokinin) (TAC4), transcript variant 3e-62 242 70.82 0.677376171352075 TCONS_00093591_1 sp|Q86UU9|TKN4_HUMAN TKN4_HUMAN Tachykinin-4; 2e-21 84.7 54.00 0.869158878504673 0 noncoding CCCACCTGCTGAGAGGAGCCAGAGAGAGGACCAAGCCTGCTTGAGGCAGTCTTTGGGCTGAGAGGGGTCCCCTAGGGTCCCAAGATGCTGCTCTGCGTCACCTTGCTTCTCCTCCTGGGGCTGTCTGCATGCACTGTGGCAGGTGACAAGGAACTGGCAATCAATGCTGAAGTTGGCTCCTGGGTGGCTGTGACCCTGGAGGTAGATGTCATCCCCAGCATCCTGCTTCAACTCCGGAACGTGAAGAAGGGGAAAGCCAGCCAGTTCTTTGGGCTAATGGGGAAGCAGGTAGGAGGAATACCTCCCATCCAGTCAGAGGGAACAGGGTATCAGCGAGAACCAGTGGTCCAGGGGCGAGGAGGAGCAACTACAGAAGGCAAAGAGGCTGAGAACCATGGGTCAGAGTGAGAGCCCCCAGCCCCGCCTCCCAGAGGACGAAACCCCTCTCCTTACCTGGACGTGGCAGCCAACCAGCCGACCAGGCCAGCCCGCTGCTCCAGGTCTTCTGTGCTCGTGTGTCCCTCCCACCACGCTGAACTCACTGGGCTCCTCCCAGGACTCTCGGTCTCAAGCAGCAGTCGTGCACAAGTGTGCTGTTGTCACCTCTGAAAACTAGTGAATGACCCCACACACTCGGACCTCACTGCATAGCAGGAGTCGTCCCACTGATACCTTCCTACCCCCGTTTCTCTCAATCCTGTGCCCATAACACAGCAAGTGTTCAATAAACCAATGAAGAGCGAATGA TCONS_00096658 TCONS_00096659 TCONS_00096661 TCONS_00096660 TCONS_00096662 TCONS_00096663 TCONS_00096664 r 3' 6504 TCONS_00096658 TCONS_00096659 TCONS_00096661 TCONS_00096660 TCONS_00096662 TCONS_00096663 TCONS_00096664 r 3' 15824 EMBV3_06061 CATTCCTGAGCCTGTCTTTGCCTTTTTCATAAGCAGCTGGCCGCAGAAGAGCAGCTTGCT Gene GeneID:521902|LOC521902:XM_002707800:198_cdna Constitutive 0 NULL GeneID:521902 29 GENE LOC521902 NULL similar to pregnancy-associated glycoprotein 4 EMBV3_27217 ATCCTATTCAACACTAATAAGCCCCAGCTGTCCATGAGGATCTGCATAGAGGAGGGCACC Gene BVT0101_001208 + 1 EMBV3_09308 GK000027.2:18810611-18914042 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00157523 1 XLOC_095978 NonCoding TCONS_00157523 XLOC_095978 NonCoding NonCoding - 27:18908754-18912003 - TSS117848 3249 2 TCONS_00157523_6 87 0.20621729763004 1 0 0.000339200828378316 0.00038350373486221 0.000296220038421462 0.000158466807936095 0.000156518906331072 0.000125510379077185 8.6156386812866e-05 6.58403956895228e-05 0.000169993632565186 0 7.04582384226363e-07 0 7.2416554233242e-05 7.2391445883194e-06 0.000157046893365932 2.03228574182453e-06 0 0 0.000355346398854324 0.000252331612001461 7.28799178784673e-05 7.08036317287553e-05 0 0 0.000449956087643446 0.000388162389165156 0.000228125682084888 0 0 0 NM_001075358.1 RFC5 Bos taurus replication factor C (activator 1) 5, 36.5kDa (RFC5), 7e-117 426 94.20 0.0846414281317328 0 noncoding 0 0 0 0 -0.00328476675994838 0.974249485674054 -0.0108708278861976 0.820525198114722 ACCGTCTCGCATGAATCTTGTTCACCATTTTTCTTTACAAAAATATTCTCTCTGCCAAAGAAGAGATAGAAAAATTTCCTTGCAGGGCCAGCATTCAAAATTACTCATTATCTCCACAAGAAACCTTCATGTAACCCAAGAACAACTCTTTATCTGTTTATTAAAAATCTCAAATTGTCCTGGTCACAAGATCTGTGTTTATATGCATGTTGTTAGTATTTAGCATCTGCACCTAAATTTTAAAAAGAGGGGGGTTAAGATAAGGTTTTATTAATTATGTATGACCCAAACACCAAAGACGCATCTCAGATTTTTACTAAAAGATCAGTTAAATAATTTTTATAGAACATTGGCTTTGAAGCACCATAGAACCTTCCTCAAAGCTGGATTATATTTCATAGAAAAATCTTTCAGTGTTGTTGTTTTTTTTTAACTTGATTGTAAAAATATTCTTGCCAAAATCCTGACAGCTCAAGAGGGTGTGCCCTCCTCTTTTCTTTTTCCAGCTATTGATGCACATTCATGATATTGTTTTTATTGTTTCCTCATGGAAAATAAGCCCAATTTTATGCTTGAAAAATGATTACTTTTCAGGAAGATTACATTTGACTTGAAATTTTAGGAAGTACATATTTAAAAGTCCTTTTAACTCTTCAGTAGTTTAAAAAAAATAAACTAAAATTTTCTCCACAAAAAAATTTGCTTTGACTCTTGACACTATGACATGCTTATTGATTATTATTTGTTTTTATTTGAAATGACCTTTTAAAGGACACATTCTTTGCAATTGTTAAAATATGTAATATAAATAGTTGTAAACTATAAAAAACCAAAATTATAATCTCCCACAAATCCACCACCCAGATGTAATTGTTATGCCTATACTTTTTCTTCTTACTTTCACACATACTCACAGACTCATTTTTTTTTGAACTTTTTTTTCTTGCTATTAAAAACAAAAAAGATTTTAAAATCTGGTACATAAAATTCCTGATTCAAGTACTTCAGGATGTCAGGAAGGTCTCCTTCACATGGTCATTTAGGATCTCAGATTCTTTGTTCTAAACTTTTTATTTTATATTGGAGGATAGCCAATTAACAAGGTTGTAATGGTTTCAGGTGGACTGCAAAGGGACTCGGCCATACATATACATGTGTCCATTCTCCCCAAACCCCTCTCCCATCCAGGCTGCCACATAACACTGAGCGGAGTTCCCTGTGCTGCACAGTAGGTCCTTGTGGGTTATCCGTTCATACACACTCATTTTGAAAAACAACTCAGATCACACTGTATATACAGTTTAGTATCTGGCTTTTTGGCTTAAAATTTTGTTATAAGCATCTTTCTATGTCATTAAATATCCTTTGGGAAAAAGCTTTCAAGCTCATATAGTATTCCATATAGAGCCACACCACATTTTATTTAAAAATTCTATTTATTTTTGATCTCTAATGTTTCTAATGTTCTGTTTCACTAATCAAAACGTGTCAGGGAAGTCTTGAGTGAACTGGAACTGGGGCTCAGAAGCTTCCAGATTGTTGGCAGGCAGAAAGAATCCTGGCTCCATAGGGCTTTGTTGGAATTACTACAAATACTTTCATAGAAGCTGATGAACCTACTGAATTTACAAAAATTTGAACTGTGCACAGATACTTGCAAAAGTCTGATGATTAGGGAGCCTGTGATGATTATCAATCTGCCCCACACATGTATCTAATTCCATCTAAAGAGAGGGAAACTTATTATAGATGAAAATGGGATCAAAATGTAAAGTATATCTCAGCATCAGGGCTTGATGTCAGGGGAGCATGGTGGTTCTGGGCCCAACATTCTGTTTTAAAACCTTGCCTGTTCACAGAGTTAGCACTCCTTCTATGCTGGCCCGGAGGTTCCCCTTTGGCTCCTAGAAAAAGGGCAGAGCTGCCTGCAATCCACAGTGCGCTTGTTCTCTATATCTGGTGTAGAGCAAGGCCAAAGAAGACATTGGTATTTGGCATCAACGACTTTATAAGAATCCTGGAAGTGAGGATGCTGTTTCTTTGCAGAAACCCAAATGTAGCTCTCACTTGATCCTGGGTATCTAGTCTGCTTCGAGCTAAGACTTGGCTTCTATAGAGACGGGTGCCCTCCTCTATGCAGATCCTCATGGACAGCTGGGGCTTATTAGTGTTGAATAGGATTTTCCTGAGTTTATAATCATTAGCAATACTACCCTCCTGAGGAAAGAGCTCTTGGCTTCACTCCAAATCAGAAGTTTTAGCTGCCTCAGGAGAAATATAAGAATTCCGGAAAACGTCTTTCAAGTGTTTGATATGTCTCCAAATCTCCTCGGGTCGCTGAAGATCACAGCATTTTCGGAAAGTTCCCAGTGAATATCAAGTTTGGATTTAAAAATTCCAATAGCAGTATTATCTGCAGCTAGAATATCTGTGTGATTTTGCATATAAGAAAAGTTTGCAAAAACTTCTAAAGAAGAGGTTCTCCAGGAGAAGTTTGGTAATACACAACACCGTTGAAGTCTTAGAGAGATTCTATTCTGTGAAGACAGAGGGGCAACGTTTATCCAAATGGCCTGTGCTTCATCACAAACACACCAGTACCATATTTGAGGAATTAAGAATATGATCCTGAGTTCACTTATTATTTTCTGTATAATTAATATGACAAATATAGGAAGTGGATCAGTCTCCCTGAGGCTACTTTTGGCATTTCCACAGGCTCTGTTGCCATCTTATCGGTCTACTTTTCACCTCCTTGATGTTATCCTTATCATTGCTGTGGAACTTCCTATCTTCCTCCTCTGGGTCTCCCTTCAATTTCCCAGCCTCTGCCATGGTACCTTGTGCATGACCATCAGTCAGTTCATATCAGTGCTTCTTAACTAAATGAATGGCTGGTTTCACTTTCTGCCCTAGCTCAGGTCAACATAGTCAGCCATTTCAATGATGTAGTCTCTTCTCTCAGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCGATGGGGTCGCTAAGAGTTGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAATCCACTCCAGTGTTCTTGCCTGGAGAATTCCAGGGACCAGGGAGCCTTGTGGGCCGCCGTTTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAGTCTCTTCTCTCA TCONS_00155157 . 5' 2027 TCONS_00155157 . 5' 2027 EMBV3_30768 CACTTATCCTTGTAGTCAGCACACTCTTAAAGACAAGAAGACCTCAACATAGTGGGTGAG Gene GeneID:508698|HAUS2:NM_001076819:130_cdna Constitutive 1 NULL GeneID:508698 10 GENE HAUS2 CEP27 HAUS augmin-like complex, subunit 2 EMBV3_40590 CCTTTGGTGGTAACCTGATTTCCTTTTCACCTCTGAGGCCTCTCAGTGGAGAACAACCAG Gene GeneID:509161|DLGAP5:NM_001076822:56_cdna Constitutive 1 NULL GeneID:509161 10 GENE DLGAP5 DLG7 MGC142311 discs, large (Drosophila) homolog-associated protein 5 EMBV3_10358 GAATCCTCTGCCCCTCACTCCTATTTATTAAGCGCCACACTACCCAGGAGATACACTAGC Gene GeneID:535277|TPM4:NM_001101162:98_cdna UTR3_Alt 2 NULL GeneID:535277 7 GENE TPM4 NULL tropomyosin 4 EMBV3_04868 AGTCCTCTTGCGTCCCACTGTGGTTCGGGGGGCTGCCTGGTCAGAATGGCCGTGGGATGG Variant GeneID:615893|CYBASC3:NM_001099149:109_cdna 134^239 2 EMBV3_31024 GeneID:615893 29 GENE CYBASC3 MGC166426 cytochrome b, ascorbate dependent 3 EMBV3_30013 TGTGTGCAGCTGAGGGTGCAGAGGGATAGGGTGTGCAGGAGACGCTTCATGTTATACTAT Gene GeneID:505658|CTSG:XM_002696642:205_cdna Constitutive 0 NULL GeneID:505658 21 GENE CTSG NULL cathepsin G EMBV3_02111 TGGCCAGAGTTCCCTTCCACCTTGCGACTGTTAAATTTGTATGCCAACCTGACTGGGCTA Gene BVT0102_403975 + 0 NULL GK000002.2:23974946-24065276 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35485 TCTCTAACATGCTGGACATCAACGGCCTGTCTGTGCCACCGAACATAGCAGAACTGAAGA Variant GeneID:617534|RSU1:NM_001040601:160_cdna 222^272 1 EMBV3_37297 GeneID:617534 13 GENE RSU1 NULL ras suppressor protein 1 EMBV3_17324 GCTTACTCAAAATCTCCATCCCCACACCCAAGACAGGGCAAGGCGGTGTTCCAATCAGTA Gene GeneID:282573|KCNMA1:NM_174680:245_cdna UTR3_Alt 3 NULL GeneID:282573 28 GENE KCNMA1 NULL potassium large conductance calcium-activated channel, subfamily M, alpha member 1 EMBV3_14736 GGATCCTTTGATTACACTGAATTCCCAAATAGGTACTGGTCCCCAAAGGGTTAAGGGGCT Gene BVT0102_027959 + 0 NULL GK000019.2:56506802-56516130 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094703 1 XLOC_057524 NonCoding TCONS_00094703 XLOC_057524 NonCoding NonCoding - 19:56507542-56509786 - TSS70772 2244 2 TCONS_00094703_7 99 0.401515151515152 1 0 3.76409621868541e-05 3.60538738740703e-11 0.000525234319528365 4.07065582549134e-05 2.20017425268447e-06 0.000219687804401979 3.98750020948545e-06 8.79113236638695e-12 0 1.28349012423031e-05 0 0 0 0 0.000192399779965509 0 0 0 1.54068957892579e-05 0.000166747671260446 0.00026650537345112 0 0 2.35800881881812e-11 1.90983932152746e-11 4.40643176003155e-05 0.000133162482088813 0 0 0 XM_005194877.1 SLC9C2 PREDICTED: Bos taurus solute carrier family 9, member C2 (putative) (SLC9C2), transcript variant X2, mRNA. 9e-50 203 74.84 0.135918003565062 0 noncoding 0 0 0 0 -0.0590543929129204 0.662334142817023 0.0532472005072253 0.365625949947196 CCTCTCTCCCCCAACCAAGCAGCTTCAAGCCAGCATCTTTTGCAAACAGCGACTGGGGCTCTTTTACACCAGGCTGGTCCCTTTACTTGGGGTCTTCCCACCCTCACCCAGCCTGGTTTATCCTCCTTATCCTTGAGGGCCTTATGCTGATGTCACATGCTCCAAGGAGCCTCCTTGACCTCCCTGAACCCTGGACTGGGTTGTGTGCCCCTGGGGCATGTTTTTTTTTTTTTTTTTGTCATTTGCCACACTAGTTTGAAATAATCTGTTTAGGGATCTCTTCCCTATTGCATGGTGAACCCCAAGGATGGACACTGTGTAGCACATCTTTTGATCCCCACCACCTAGCTCAGTGCCTCCACATAGCAGTTGCTCAATAAACGTGTAGTCAACCCAGAAGGGATCGTCACACGGCCTCCCTGAGCCTCAGCATTCTCATCTGTAAACAGACGCAAACACCGCCAGCTCTCAGAGTGACCCTAGGAACAGCTGGGATTGACTGAGGAGCCGCCAAGGACACCAAGGGCTCACTGCAACTGCGCAAGCCACAGGTCTCCCCTTTGCCACCTTGCCCAGTCATCTGAGATCTGCTCTGCATGGGCCAGGGGCTCAGAGGCTGGCTCCTGGAGTCGGGAGCTCTGCGGCAGAAACCCCAGTTTGGTTGGGGTACCCAGGTCATGCCCTAAGGATCTGAGCTACTCCAGCAGTCGCCCAGTCCACCCCGGGAAATACAGGCTCAGGGAGCAGCTGCCGGCACCATCCATCAGGGGTGTACCCCACAGTGGGGGCTGCTGATGCGCCCTCTGAGAGAAGGAGAGCCCGGCCCAGAGGCAGTAATACCACAGACCCCACTGAGCCCAGCAACCCCTTCCTCTCCTCATTCCAGACCCCTTTAAAAATGACTAATGGAGCGCTTCCCTGGTGCCTCAGTGGGAAAGAATCTGCCTGCCAATTTAGGAGACACGGGTTCCATCCCTGGTCCTGGAAGATCCCACATGCTGCAGAACAGCGAAGCCGGTGCACCGCAACTGATTGAGCCTGAGCTCTAGAGCCCAGGAGCCGCAACCACTGATGCCTGAGCACCCTAGAATCCATGGTCCGCAGCAGAGGCCTCTGATATGAGAAGCCCTCACACCGCAGCTAGAGAGTAGTCCCCACTCGCAGCATCTAGAGAAAAGCTCGCACAACGAAAACTTAGCACGGCCAAAAATAAATAAAATCATATATATAAAAAATGACTAGGGGGACTTCCCTGGTGATCCAGTGGTTAAGATGCAAGGGTCCAGTGCTTCAAATGCAAGGGGCACAGGTTCGATCTCTAGTTGGGAAACTAAGATCCTACATGCTGTGCATCACAATCCAAAAAAAAAAAAAAAAGACTAGGAGAGCAGGAGTTTGGCAGCAGTTGAGAGGTGAGATGTGCACCCTGAGAGGCCCTCAGAAGACAACTCATGAGGTCCCTCGGGTTTCTTCAAGTCTGGAATTTCATTACCCGGAACCTGAGTATAGACCTGGGTTGGGGGATGGTCCATGAATCATCTGAGATCACGTGTGAAACTCAAGGTGTATCTGACACGGGAATGTGGGTTTGCCAGGAAAAGGATCCTTTGATTACACTGAATTCCCAAATAGGTACTGGTCCCCAAAGGGTTAAGGAGCTTTGTACTACATATTACTTCTATATAAAAAAAAATAATAAGACAAAACCCCCTATTGTCTGATTCTGCAGCCTTAGGGCCAGAGTGAGTCTGGTATGTAGTGGGGTTTCCTTCTGCAGACTTTGCCAAAGAGCTGAGGTCCCTGAAACAGAGGTCCAGGAACCTCAGATGGCAGCTCCCACCTACCCACGCTCATTCCACAGCCTCAGGGAGGCCAGACTTGCTCCCTCATTAGTTCAATCATTTATTCATTGACAAGCATTTAACGGGCTCTTAAGCCAGGTGCCTGGGATCGCAGAGGAATGAGCCACACCACCTGCTTGCTTCATGGAGCTCACAGTTTAAACCATGGGCATCCGAGGTGGGCGGCGTATTCTCCAGGGATGCACCTACTTTTTGCTTGACCGTGTACATCAGTTACGGTACCCGTTTCTATAAAGAAACAACTTAAATGATAAATGGACAGTGGATATGTGACCAGAACAGTTTGGTGACCCTTCTAGAGACCTTGTATTAACCCCCACCACAGTTGACTGTTTAATCTTTCTTACTCTTAAAACAGTCTCTCCTCTCTCACCCCCAAACA TCONS_00097929 r 5' 245 TCONS_00097929 r 5' 245 EMBV3_18283 AAACCCGTCGGACTTTCTGTAAGAAGTGTGGGAAGCACCAGCCCCACAAAGTGACACAGT Gene GeneID:613432|RPL36A:XM_002693457:41_cdna Constitutive 0 NULL GeneID:613432 15 GENE RPL36A NULL similar to mCG7611 EMBV3_16638 GGAGACAGAGAGACAATAAGACACGGTTCCTGCCTTCGGGGAGTTCTGACACAGTCTGGT Gene BVT0102_267431 + 0 NULL GK000002.2:125714129-125727884 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112309 1 XLOC_068206 NonCoding TCONS_00112309 XLOC_068206 NonCoding NonCoding - 2:125715845-125716360 - TSS83930 515 1 TCONS_00112309_1 38 0.584466019417476 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000666699548452281 0 0 0.000167089715703675 0 0 0 0 0 2.44607000665229e-06 0 0 0 0 0 XM_865266.4 LOC533266 PREDICTED: Bos taurus free fatty acid receptor 4-like (LOC533266), 9e-74 280 87.56 0.43495145631068 0 noncoding TCTACCACTGTTTAACTCCTCAACACATTGTTTCTACATTTTTGTACCATTGGTCTTCAAATCTGATGCAGTCTTGTTATCATATTTGCATGTCTTACCCCTTCTCTCCAACTAACAATAGAATGTTACTGACCACGTTTGCAAAGTGAGGAAACCCAAACTCAGAAAAGTAAAGCTTTGTGTCAGGGTCATATAATGTCTTCTTTTGACTGCACCAGACTGTGTCAGAACTCCCCGAAGGCAGGAACTGTGTCTTATTGTCTCTCTGTCTCCCACTAGCATGTAGTGAGTCCTCAGTTCAGTTCAGTTGCTCAGTCGTGTCTGACTCTTTGCAACCCCATGGATTGCACCATGCCAGGCTTCCCTGTCCGTCACCAACTCCTGGAGCCTGCTCAAACTCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTTGTCCTCAGTTGTCCCCTTCTCCTCCTGCCTTCAATGTTTCCCAGCATCAGGGTCTTTTCTCATGAGTCAATTCTTCGCA TCONS_00106599 . 5' 1055 TCONS_00106599 . 5' 1055 EMBV3_00836 CCCTCTCTGGAGGATCTGAAAGTGCAGGAGGCAGATAAAGCGGCACTGTGCGGAGCCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36731 TGGGGCAGCATGAGGCCCCTTATGAAATTGCTGGGCCTTCATCTTGGGTCTCTCCAGGGT Variant GeneID:541021|PPAPDC2:NM_001024573:59_cdna 446^759 1 EMBV3_07802 GeneID:541021 8 GENE PPAPDC2 NULL phosphatidic acid phosphatase type 2 domain containing 2 EMBV3_09535 GCGTCCCATTTCTTCTGGGGACTCTGGTCAATCGTTCAGGCCAAGATTTCCTCCATTGAA Gene GeneID:514865|CHKA:XM_002699402:427_cdna UTR3_Alt 2 NULL GeneID:514865 29 GENE CHKA NULL choline kinase alpha EMBV3_33491 AGCCGAAAAACATGCACAGGGACCATGAGGAGGGTGGGGCCACATGTCTAAGCATTTACA Gene GeneID:516864|ALDH1L2:XM_002687645:816_cdna Constitutive 0 NULL GeneID:516864 5 GENE ALDH1L2 NULL aldehyde dehydrogenase 1 family, member L2 EMBV3_32075 AAGAGAGCCAAAAGTGGATGCAGAGTCCTCAGGGGTCAGTGGTCACCAAAGGTCATTTCT Gene BVV0102_161866 + 1 EMBV3_26299 GK000011.2:87307999-87466569 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22330 GACCCAGTCCTGTACTCTCAGTGGAAACAACTTCTAACAGCTCAAACCTCTCCTCCAGGC Gene BVV0101_007061 + 1 EMBV3_30772 GK000006.2:46504927-46724552 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37311 TCTGGCAGAATCCACAGCCTGGGTTTTGTCTTTAACCTTTATCGCTCGCAATCCCAATAA Gene GeneID:281240|IGF2:NM_174087:212_cdna UTR3_Alt 2 NULL GeneID:281240 29 GENE IGF2 MGC140034 insulin-like growth factor 2 (somatomedin A) EMBV3_23961 ACGCCAGTTCATCTGCAACGAATGCGGCAAGAGCTTCACGTGGTGGTCGTCACTGAACAT Gene GeneID:100337494|LOC100337494:XM_002687146:538_cdna Constitutive 0 NULL GeneID:100337494 4 GENE LOC100337494 NULL hCG1990708-like EMBV3_17899 TCCCGACCCGGCTCTCCAGAGAGAGAGGTGAAACGGAAGGTGGAGGTGGTTTCACCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10444 AATCCCAGAGCCCCCCTCCAGTCCCCACTACCCTGGAAACCAGAAGAACCAGGAGGAACT Gene GeneID:511170|KIF18B:XM_002696046:339_cdna Constitutive 0 NULL GeneID:511170 19 GENE KIF18B NULL kinesin family member 18B EMBV3_24762 CACGGTAGTTCCAGTGCAGAGAGTTCTGGCTAAGATTTTGTTTGCTTGTGTCTGATGCTG Gene GeneID:533569|MGC142908:NM_001083721:18_cdna Constitutive 3 NULL GeneID:533569 X GENE MGC142908 NULL hypothetical LOC533569 EMBV3_26532 TCCGTGCTTTCCCCATGTGCTCTGTGTGTGTCTGGGCTGTGCCCGGGGCTTCACAAATAA Gene GeneID:616055|CHADL:NM_001110089:207_cdna UTR3_Alt 2 NULL GeneID:616055 5 GENE CHADL MGC179327 RANGAP1 chondroadherin-like EMBV3_13839 ATGCATCACATGTCTTAGGCTGATGCCACTACCCGACTGGTTTATTTGCAATTTGAGCCA Gene BVT0102_139037 + 0 NULL GK000004.2:81908663-81919123 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184687 TCONS_00184689 TCONS_00184690 TCONS_00184688 1 XLOC_111407 Coding TCONS_00184688 XLOC_111407 Coding Coding RALA 4:81917329-81973519 j TSS137472 2458 1 TCONS_00184688_1 109 4 0.956325971275517 0.00840310122565479 0.00477879298245246 0.0054786619674239 0.00552962805631069 0.00785083054342589 0.00244706214311539 0.00604569931642648 0.00506790501968077 0.0081476662909093 0.000626918167502593 0.000103768864664292 0.000207491668576577 0.00118266600144869 0.00167684912143558 0.00184788159428635 0.00400896874507272 0.00178921849889579 0.00254367060344368 0.0027983560493274 0.00423182725546157 0.00372441839465181 0.00117680084904039 0.00174167650234956 0.00241750386683702 0.0057846500384419 0.00583295765782139 0.00320342603418572 0.000214053040579312 0.0001606513840491 0.000489027326573389 NM_001034644.1 RALA Bos taurus v-ral simian leukemia viral oncogene homolog A (ras related) (RALA), mRNA. 0.0 890 97.91 0.213181448331977 NM_005402.3 RALA Homo sapiens v-ral simian leukemia viral oncogene homolog A (ras related) (RALA), mRNA. 0.0 2560 84.73 0.92839707078926 TCONS_00184688_1 sp|P63321|RALA_MOUSE RALA_MOUSE Ras-related protein Ral-A; 2e-72 218 99.08 0.990825688073395 1 coding 1 1 1 1 -0.884366019498172 0.0767502043824335 -0.353100225698459 0.00418273198879494 ACCTGCACCGCAAGCCGGTCAGCCGCCCCGTGGGCTCCGGAAGCCGCGGCTGAGCTGGCTCCAGCCGGACAGTGCTCCGCTCTTGTAGTCTAGGAGGCTCCGCGCCGGGAGCGGCAAAAGGAAGAGTCCGACAGGCGGCGGTGGAGCCTGGGCGGCAGGAGGAGGTGGAGGAGGAATCCTGGACACAGCTGGGCAAGAAGACTACGCTGCCATTAGAGATAACTACTTCCGCAGCGGCGAGGGCTTCCTCTGTGTCTTCTCCATTACAGAAATGGAATCCTTTGCAGCCACAGCCGACTTCAGGGAGCAGATTTTAAGAGTAAAAGAAGATGAGAATGTTCCATTTCTGCTCGTTGGAAACAAATCAGATTTGGAAGATAAAAGGCAGGTTTCCGTAGAAGAGGCGAAAACCAGAGCCGATCAGTGGAACGTTAACTATGTGGAAACATCTGCCAAGACGCGGGCCAATGTCGACAAGGTATTTTTTGATTTAATGAGGGAAATTCGGGCCAGAAAGATGGAAGACAGCAAAGAAAAGAATGGAAAAAAGAAGAGGAAAAGTTTAGCCAAGAGAATCAGAGAAAGATGCTGCATTTTATAATCAGAGCCCAAACTCCTTTCTTATCTTGACCATACTAATAAATATAATTTATAAGCTTTGCCATTGAAGGCTCAATTGACTGAAATTACTTTAACATTTTGGAAATTGTTATGTATCTCTAAAAGCATGAATTGGAACTGCACTGAAAGTCAAATTCACTTAAAAAGAAATTAGTGTGGCTTCACCAAGAAGCAAAGTTCAACTTATTTCATAATTGCCTACATTTATCACGGTCCTGAATGTAGCGTGGGCGCTTGTGTTTTGCCGGCAGTCTTTCTTGAACTGTTCGAGAGGTGAGAATGGGGGTGGACAATGGGAGGAAAGGCTACTTCCTCTGGTTTATTATAAAGCTTAAATTTTATAATCATTTTAAAATGGCTTGGTCTTCTACTGCCTTGAAAAAGAAATGACAATTGTGAACATGATAGTTAAACTGTACCACTTTTTTTTTAACCATTGTTATGCAAAATATAGAAGAAAAAGTGACTGGCATGATTGTTACATATAGTTCAATTGAGAGTAATTCATCTGTGAACCTGCATTAATTACCTGGTGATTAACTTAGAAAAGTGGTGTAAACTTGTACATGGAAATTTTTTAATATGCCTTAATTTAGAAACTGAAAGATACCTGGTTACATCATTCTGGGTTGTATCTGGCATCCTCATGGTGCCGTGGGCCCACTGCCCATGTGTCCTGGTGAGAGAATATATGTCAGGATGGAGGACCACTTTTGTATAGAAGATGCTCAAGAAATAACTGCTAGAGTCTGTCCAAATGTAAAATGTGTGCCATACTCTGGTTCTTGAAAATGAAGTTCCAGAGCTCCTTGATTGCTTTTAATTAACTGTAAGGTAGTTTAAAAATGAAGGACCAGCATATACTTGTAAGATAATTTTAGACTATGAGGATTCAGTATGTCTCAGTGAACCCTTATTCTTTAAGATGCTGATCCCTGGAAATCCTTTTATGCAAGTGGTGAATATGTGTTAAGATTTTGATCTCTTTGGAGCAGGGCATAGGAAAAGTGTCCACGGTGCTAATGCGTTTTGCACTAGACCACTTCAGGAAAATAGTTGTGCTTGCCATCTGTTAACTTCTAAATTTGTATTCCTGAGGTTGCAGTTTGGCTGTGCGGGAGTTACTAGGAGTGTATGTAGTCTGTGTTCATAATGAAGAATACTGTAGTTACATTTTCCTAAAGTTAACATCGAACAGCCAAACCTGAGGATAGTGCAGAAAACATGTTTGCCACCAAACAGTAGGCTCTGTTCCTGTTGTACGGCATACCCACTGAAGGGACATAATTTCAATGGGAAAAATACCACTATCAGATTTTTCTTTTCTTTGGAATGGGACTAGGGCAGTTGTTTCAATAAAGTTTTGCTTTCTTTATGCTCAGTCTTAATCTCAGCAAGTCAAAGATGTGTTCAGGCATTCCAGATAACAGATGTGTCCGTAAAGTTAACACAAATAGGCTATTTAGGAACTGAACTCTTTAGATACTACATCCAGCTTGTCATGTTAAATATGTGTCCCTAAAGGGTTTGAGATGTACATCTTTCATTTCCTATTTTTCATAGGCTGTGCCGTGTGCAGAATTAAAGTTCCCCATATAAGCGCTGCCCCGCGGGCCCAGCGGTCTCCATGTGTACTTGTTGCAGTCTCATTTAACCAGGGGTCCTGACCACTAATGTTGTGACTTTGCTTTGAGACCTTTCCTCTCCTGGGTACTGAGGTGCTATGAAGCCAAATGACAAAGATGCATCACATGTCTTAGGCTGATGCCACTACCCGACTGGTTTATTTGCAATTTGAGCCATTTAAAGACCAATAAACTTCCTTTTTTTAAATGTT EMBV3_20472 AATCAATGACTCTAAGCGGACAACACAGGACCGAGAACAACTCCAGCCCCTCCAACAACG Gene BVV0102_078660 + 1 EMBV3_29747 GK000010.2:26445635-26493104 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121822 1 XLOC_073490 NonCoding TCONS_00121822 XLOC_073490 NonCoding NonCoding LOC100847284 21:61983539-61985682 = TSS90653 887 2 TCONS_00121822_2 46 0.0473506200676437 2 0.586834733893557 0.000368659782515473 0.00142640989217922 0.000834633957059002 2.29520017266819e-05 0.000172550525941375 0.000350849592216037 0.000433924516804673 0.00167760285147774 0.00152915712262596 0.000767051849387862 0.000532982998131706 0.000372785659910502 0.000389389129545337 0.00128644213637053 0.000352188904915686 0.00727999340360531 0.00448562577508667 0.00292074675416067 0.000153478881008211 7.18423418098347e-05 0.000277219080481347 0.00261086389505191 0.00556325205147087 0.00409703100169538 0.000585681985938751 0.00027688772328273 0.000425565396531273 0.000993855811407545 0.000993620423858321 0.00241624759600601 XR_139009.2 LOC100847284 PREDICTED: Bos taurus uncharacterized LOC100847284 (LOC100847284), 0.0 1600 100.00 0.998872604284104 NR_003138.3 SNHG10 Homo sapiens small nucleolar RNA host gene 10 (non-protein coding) (SNHG10), transcript variant 1, non-coding RNA. 1e-23 114 81.67 0.134160090191657 0 noncoding 0 0 0 0 0.0420707994259982 0.780992490987556 0.0230596110559395 0.706640599264449 AGACGGCGGCCTCGGCGTTGCCGCGGCAGTGCGGTTGGCCGGTACCTGGGTGGTGAGCTCGCGTTGTTGGAGGGGCTGGAGTTGTTCTCGGTCCTGTGTTGTCCGCTTAGAGTCATTGATTCCAGGTAAATCAGAGGAACAGACATCATGAACAGAAATAATACAGGAAGTGATGTGATGCCGAAGTTTAACTGTTGTTCCAGAAGTCCAGCATCTGTGGCTCATAACTTTAGGAACTGTATCATTTGCAAGGTCACCTAACTTTTACTCATATTGGGTTGGCCAGAAAGTTCACTCAGTTTTCCTGTAAGCTGAGAGAACCCGCACGGACTTTTTGGCCAACCCAATACAGTAAGTTTTGTTTGTTTGTTTTTGTTTTTTTTTAAATAAATATTGACAGTTTGTTCCAGAAAACCTAAATTGTAAATTGCCTACTCTAAGCTGCCTGATTCTCTGCTTGTGTTCACTGGAATAGGGAGAAGAATTTGCAAACTGATTATGTGAGGGTCCGAAATGTAAAACCGAGCCGTGGGGAGTAGCCTGTTTTTTGCCTGGTGTGTAATATCGGCTTTGCCTGTTACAACTGACAGACATTTTATTAAGTTGAGAATATAGCTGTCATTAAAGACTAAGAATAATCCTTGAGCAGGAAGAATATGAACCCTATGTTTTCCAAAATTACGATAGAGTTGCTGGTTACAGTCAAGTATGGTGAGACCGTCCGTGAAAGGCAAGGACATGGAAAAGCAAGTGGGAGTTCTTTCCAAGAGCTAGGTGGGGTGGCTTTGATAGGATGATGAAGGGAGAGAGATCACCTATCCAGACCAAAGAAATTGAAGCAATACACCTAAATGTAAGTTTTTAATAAAGTAACCTAAAGTATAAAA EMBV3_17307 GGGCCTGGAATGCCTGCAGAGCTCGTGGCTGGCCCGCTGATTTCTATCTGTATTTATAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40579 GCTGGCTAACCGAGTGGCGGGACGAGGCAGCCAGTCTGTGCGGGACGTGTTTGCCAGGCA Variant GeneID:528432|MUS81:NM_001046291:48_cdna 374^704 1 EMBV3_31282 GeneID:528432 29 GENE MUS81 MGC137233 MUS81 endonuclease homolog (S. cerevisiae) EMBV3_13127 CAACGAAGCCCCGCCTCCACTGTCCCAGCATTGATCCCAACCTCCATCAAGCCAAAACTT Gene GeneID:618181|GRIN2D:XM_002695195:880_cdna Constitutive 0 NULL GeneID:618181 18 GENE GRIN2D NULL glutamate receptor, ionotropic, N-methyl D-aspartate 2D EMBV3_37305 CCACTGACGTGGACATCGTTTTCAGCAAAGTCAAGGCCAAGAATGCCCGAACCATCACAT Gene GeneID:507212|TPPP2:NM_001034284:34_cdna Constitutive 0 NULL GeneID:507212 10 GENE TPPP2 MGC127822 tubulin polymerization-promoting protein family member 2 EMBV3_27122 CAACTGTCAGCCGGATGGGACGTTTGCTTTGCACTCACTAATGAAAATAATATTGGGGAT Gene GeneID:510408|PLCL2:XM_002685174:23_cdna Constitutive 2 NULL GeneID:510408 1 GENE PLCL2 NULL phospholipase C-like 2 EMBV3_35543 ACTCCCAGTACTTGATAGAGCCATGTGGCTCGGGCAAATCGCGGCTGACCCACATCTGCA Gene GeneID:538697|STARD13:XM_002691805:451_cdna UTR3_Alt 2 NULL GeneID:538697 12 GENE STARD13 NULL StAR-related lipid transfer (START) domain containing 13 EMBV3_22656 TATTCACTAAAGTTAGAGCTACAGCTGCCAGCACAGGGTTGGGGAGAGGGGAATTCAGAG Gene BVT0102_151747 - 1 EMBV3_00493 GK000030.2:4940506-4995336 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248999 1 XLOC_151942 NonCoding TCONS_00248999 XLOC_151942 NonCoding NonCoding - X:4950814-4951197 - TSS186220 383 1 TCONS_00248999_2 92 1 0 0 0 0 0 0 0 0 0 0.000473820378387109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0286771975382926 0.861198388856293 0.0448982787561072 0.381869095937575 GATCTGCTATGAGTGCACAGCAGAATGTTGAACTGCTTAGTCACTTAAACTTTTTGGACCTATTTCCTCAAAGGGCTCTTGTGAGGATGGCATATGATCATTCTGGTGCAAAATCTAGACAAATCATTAGGTCTTCTGGTGGACCATTCCTCTGGGGACATGATCAGGGGAATGACCTCACTGCTCCCCAGCCTCTGAATTCCCCTCTCCCCAACCCTGTGCTGGCAGCTGTAGCTCTAACTTTAGTGAATACAGAGAATGATGGCCTGACATGCCAACACTGTTGAAGATCAAAAGAGTTTGTAGATAATAAGAGCAAAAGACCTATATGAACAAAAGGGATATTTGGGACTCCTGAGATTAGGAATGTCTACTGAAAGCAC TCONS_00246186 . 5' 10310 TCONS_00246186 . 5' 10310 EMBV3_31651 GGGGAAAGGGGGAGGGGTTATTCTGCATTTAAGTGTGTGTTAAGCAACTACAGAATACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22605 TCAGAGAAGTCTGCGAAATATTGGTCTCAGATCCCGCTGCCTCACGGAACTCACGCCTTT Gene GeneID:100337503|LOC100337503:XM_002690952:307_cdna Constitutive 0 NULL GeneID:100337503 10 GENE LOC100337503 NULL pellino 2-like EMBV3_01443 CTCCGCAGGGAGGTGACTGGTGATGTGTATGTTTGATTTTGATCTGGACTTTGTGCACGT Gene GeneID:508051|WDR4:NM_001100320:17_cdna Constitutive 2 NULL GeneID:508051 1 GENE WDR4 NULL WD repeat domain 4 EMBV3_43588 TCAGATTCCTGAGACGTGAGGCCCTGGGGAAGCCTCTTATACTCAGTCCACCATCACTTG Gene BVT0102_258949 + 0 NULL GK000028.2:3451006-3459935 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159959 1 XLOC_097560 Coding TCONS_00159959 XLOC_097560 Coding Coding TRIM67 28:3458805-3520213 j TSS119762 3473 1 TCONS_00159959_5 780 10 0.943605777842917 7.15821878147362e-05 7.72462261494672e-10 1.7362257166018e-05 4.97429814852447e-06 6.84886208955799e-06 1.24246750292217e-06 0.000119890551127511 1.02140538697385e-10 6.4377065717411e-05 2.58565419805796e-05 3.18013303399356e-06 2.72959794818051e-05 7.95763441383099e-06 8.17603858134129e-06 6.77864841425413e-13 4.72544221872542e-12 0 1.08368365308663e-05 2.08015706938083e-06 7.19635905542093e-05 3.07913181122799e-06 5.2175854869999e-06 3.16278462391865e-06 0.000144495963189692 5.81530563865985e-05 2.14933349984864e-05 2.28156262549922e-06 0.000176992034942622 1.52337214585304e-05 0.00025620891228722 XM_005226215.1 TRIM67 PREDICTED: Bos taurus tripartite motif containing 67 (TRIM67), 0.0 6264 100.00 0.999712064497553 NM_001004342.3 TRIM67 Homo sapiens tripartite motif containing 67 (TRIM67), mRNA. 0.0 3222 84.01 0.851137345234667 TCONS_00159959_5 sp|Q6ZTA4|TRI67_HUMAN TRI67_HUMAN Tripartite motif-containing protein 67; 0.0 1364 94.64 0.998717948717949 4 coding 0 0 0 0 -0.0970012943603768 0.601896336433551 -0.00480087128185808 0.935631845846201 ATGGAGGAGGAGCTGAAGTGCCCAGTGTGCGGCTCCCTGTTTCGGGAGCCCATCATCTTGCCGTGTTCCCACAATGTCTGCCTGCCTTGTGCTCGTACCATCGCGGTGCAGACCCCGGACGGTGAGCAACACCTGCCCCCGCCGCTTCTGCACTCTCGAGGCTCAGCGCTGTCCTCAGGCGCCGCCGCCGCGCCCCCTCTAGACCAGGAGGCGGCGGCTGGCCCGGCTTGCAGCGGCGCGGGCGGAAGCGCAGCTGGCGGCCTGGGCGGCGGTGCGGGAGGCGGCAGCGACCACGCGGACAAGCTGAGCTTGTACAGTGAAACAGACAGCGGTTATGGCTCTTACACCCCGAGCCTCAAGTCCCCAAACGGGGTTCGAGTGTTGCCCATGGTGCCCGCGCCTCCCGGCTCCTCCGCCGCTGCTGCCCGGGGCGCCGCCTGCTCCTCGCTGTCCTCGTCCTCAAGCTCCATCACGTGCCCGCAGTGCCACCGCAGCGCTTCCCTGGACCACCGCGGCCTGCGCGGCTTCCAGCGCAACCGACTGCTTGAGGCCATCGTGCAGCGGTATCAGCAGGGCCGCGGGGCGGCGCCGGGGGCGTCCGCAGTGACTGCTGTGGCCATCTGCCAGTTGTGCGACCGCACCCCGCCGGAGCCGGCCGCTACGCTCTGCGAGCAGTGTGACGTGCTCTACTGCGCTGCCTGCCAGCTCAAGTGCCATCCATCCCGGGGACCCTTCGCTAAGCATCGCCTGGTGCAGCCACCGCCGCCGCCCGCGCCCTCCGAGGTCGCCTCCGGGTCCCCGGGCGCTGTCCAGGGTGCCCCCAGCGGAAGTGGCGGCTGCAAGAGCCCGGGAGCCACCGGGGCCGGAGCGGCGGGGGGCAACACCGCCCGCAAGTATCCTACGTGCCCCGAACACGAAATGGAGAACTACAGCATGTACTGCTTAACCTGCCGAACCCCGGTGTGCTATCTGTGCCTGGAGGAAGGCCGGCACGGCAAGCACGAGGTGAAGCCGCTGGGGGCCATGTGGAAACAGCACAAGGCCCAGCTGTCTCAGGCCTTAAATGGAGTTTCCGATAAGGCAAAAGAAGCAAAGGAGTTTCTGGTTCAGCTGAAGAACATTCTGCAGCAGATCCAGGAGAATGGCCTGGACTACGAGGCCTGCCTGGTGGCTCAGTGTGATGCGCTGGTCGATGCTCTGACCCGGCAGAAAGCCAAGCTGCTCACCAAGGTCACCAAAGAGAGGGAGCACAAGCTGAAGATGGTTTGGGACCAGATCAATCACTGCACACTGAAGCTGCGCCAGTCCACTGGGCTGATGGAGTACTGCCTGGAGGTGATCAAAGAGAACGACCCCGCCGGGTTCCTGCAGATCTCAGATGCCCTGATCAAGCGTGTCCAGGTGTCTCAAGAGCAGTGGGTCAAAGGCGCCCTGGAGCCCAAAGTGTCCGCGGAGTTTGAGCTGACCTTGGACAGCGAGCCGCTGCTGCAAGCCATCCACCAGCTGGACTTCATTCAGATGAAATTGCCGCCCGTGCCCCTGTTGCAGCTGGAGAAGTGCTGCACCCGGAACAACAGCGTCACGCTGGCCTGGAGGACACCGCCCTTCACCCACAGCCCCGTGGACGGCTACATCCTGGAGCTAGACGACGGCGACGGGGGGCAGTTCCGGGAGGTGTATGTTGGCAAGGAGACCCTGTGCACCATCGACGGCCTTCACTTCAACAGCACATACAACGCCAGGGTTAAGGCTTTCAACTCCTCTGGCGTTGGGCCCTACAGTAAGACTGTGGTCCTGCAGACATCCGACGTGGCCTGGTTCACATTTGACCCCAACTCTGGGCACCGGGACATCATTTTGTCCAACGACAATCAGACGGCCACCTGCAGCAGCTACGACGACCGGGTGGTGCTGGGCACGGCGGCCTTCTCCAAGGGCGCGCACTACTGGGAGCTGCACGTGGACCGGTATGACAACCACCCGGACCCCGCCTTTGGGGTGGCCAGGGCCAGCGTGGTCAAGGACATGATGCTGGGCAAGGATGACAAGGCCTGGGCCATGTACGTGGACAACAACCGCAGCTGGTTCATGCACTGCAACTCTCACACCAACAGGACGGAAGGCGGCGTGTGCAAGGGGGCCACCGTGGGCGTGCTGCTGGACCTGAATAAGCACACTCTGACCTTCTTCATCAACGGGCAGCAGCAGGGCCCCACGGCCTTCAGCCACGTGGACGGGGTCTTCATGCCAGCCCTCAGCCTCAACCGGAACGTTCAGGTCACTCTGCACACGGGACTGGAAGTGCCAACGAACCTGGGGCGGCCAAAGCTGTCAGGCAACTAGCCTGCCAGGTCCCGCTCTGCGTGGCCGTCCCTCACTGCACTCACATAACCCCTGAGGGAGCACAGCCACATCCCGGGTGCAACCCAGCAGCCGCTGAGCATCTTAGAGACCCGCTTTCTTTGAGGGACGGAGAATGTCTGCAGGCCATGCTCACTGAGGCCACAGAGGGTGGTGAACATGGGTGCTTCCTGTCATTCCACCGGGCCTTACAGACACGAAGAAGGACATTTGTCAAGACAGCGAGGAAGTATTTGGGGTTTCGTTTGGTTTCCTGCCTTCTGTTTTCAATGCTTGTCTTTTGCAGGGGGCAGGGAGGCGGGCAAGGGGAGAGCAGACCCTGTGACGAGCATTCTGAGAGCAGGAGTCGGGGGACACTCGGGAATCCTGTATCCTTGGTGTCAAGTCTTTGCTGGACACACCACTTCAGAGAACAAAGGGTGCCGGCTCCCATCTCTGCCAGGAAGTGTCATCCTTCAGGTTTTCAGTTCTGGCATATTCAGTGTGTTACGCCACTTGCAGACGAAGCCAGGATGCACAGAGAGGGACGTTAATTATTCATCTTGCTCTTTGCCGCTCCCATTGAACTGTTGAGAACTTTTTCAAACAGTTTCCTTAGGTCCTTCATTAATCAACCAGTCTCTCTCCCCTCCCCACCCCCTCACACACACGTGCGCATACACACACCAGTCTCCTAAAATTCATTCACTCGGTTCTTAAACACAAAACCCTGGAATCTGAATCACTGTGTGCCGAGTCTCCACCTGGTGATGGCTTTTTTCGGGAGATGGCTCCCCGAGAAGTTAGCTGCAAACCCGAGTTACTCTTCTGAGCTGCGAGGCTCTCAGATTCCTGAGACGTGAGGCCCTGGGGAAGCCTCTTATACTCAGTCCACCATCACTTGAGACCATCCACGGCCACCATGACAGCATCGTGATAACAAGGAGTGGCCCGATGGCAGGGGAGGCTGTGCCCTGGGGCGGGCAGGACTCTGCAGAAGGCAGGAAACAGTGGACGCTGCCGTGTTCCTGGCCTTCACCATTCCTCGGTGTGAGGGCTCCACGTGGCTGCCGTGGGCTCTGGGATGAGCCCGCCCCTCCCTGCTGGGAACGCTAACCTTCTCCCTGCAGTCC EMBV3_33311 GAGCTTGATCCAGTTGACCAGAATGAATTGGTGAGCAGCAGCGATTCTCAGACGGGCTTT Gene GeneID:539465|SLC7A1:NM_001135792:169_cdna Constitutive 0 NULL GeneID:539465 12 GENE SLC7A1 CAT-1 CAT1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 EMBV3_21160 AACTTACCAAATAAGCATAAGGATTTGAAGGCTACAGGAGTCCTGAAGGTTGATGGAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34263 GTGGTCAACACAAGTGATCCTGACATGAGGCGGGAGATGGAGCAGTCAATGAATATGCTG Gene GeneID:615423|C10H15orf24:NM_001099143:94_cdna Constitutive 0 NULL GeneID:615423 10 GENE C10H15orf24 C15orf24 MGC159668 chromosome 15 open reading frame 24 ortholog EMBV3_25733 AAAGAGATAGTGAATGAGAGCCGACAGGTACTCCAGGAACCTGATTTTGCTCAGCCCCTC Gene GeneID:782348|LOC782348:XR_083664:20_cdna Constitutive 0 NULL GeneID:782348 5 PSEUDO LOC782348 NULL similar to Frizzled-3 precursor (Fz-3) (hFz3) EMBV3_14854 AGACCACACTGACGTTCCGTTTGCCCTTCTGTGGACCCAACCAGATCCAGCATTACTTCT Gene GeneID:526286|LOC526286:XM_002699095:92_cdna Constitutive 0 NULL GeneID:526286 29 GENE LOC526286 NULL similar to olfactory receptor MOR223-1 EMBV3_28686 TAAAGGAAATAGAGCAGTACAACCCACCTGACAACATCACCGTCCAGTGCAACGAGTCCC Gene GeneID:511847|CSF2RA:XR_084157:87_cdna Constitutive 0 NULL GeneID:511847 14 PSEUDO CSF2RA NULL similar to Granulocyte-macrophage colony-stimulating factor receptor alpha chain precursor (GM-CSF-R-alpha) (GMR) (CD116 antigen) (CDw116) EMBV3_19563 CTGGGGCAGCGTCAAGCCAGATGAGTTCTCTTATCCAGACGATCTCCAGTGTGTGGACCT Gene GeneID:493738|KLK1:NM_001008416:106_cdna Constitutive 0 NULL GeneID:493738 18 GENE KLK1 NULL kallikrein 1 EMBV3_34336 GTCTCAGAGACCTCTGGGTCAATATAACACACACCACCATTTGAATAATAGGGGTCCCAG Gene BVV0102_054884 + 0 NULL GK000013.2:27058757-28078761 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182025 1 XLOC_110750 NonCoding TCONS_00182025 XLOC_110750 NonCoding NonCoding - 4:72916020-72935874 - TSS136111 1218 1 TCONS_00182025_1 40 0.998357963875205 2 0.938749811111671 0.00125603526593286 0.000463663352385419 0.000440201809663616 0.000334736346011816 0.000600380579388867 0.000214063036271968 0.000386206878878944 0.000172390234859476 0.00028809626094532 5.11845684952055e-05 1.87904667768374e-06 3.52277248827446e-05 0.000401259629692498 0.00122575584568126 9.72508217046354e-05 0 0 3.42887881247314e-06 0.000247752603844902 0.00026561304734006 6.13945865191942e-05 0 0 0 0.000222158231527253 2.55180793357184e-09 0.000623309386604748 0 0 5.47202008518613e-07 XM_005213678.1 ZAR1L PREDICTED: Bos taurus zygote arrest 1-like (ZAR1L), transcript 8e-54 215 77.36 0.201149425287356 NR_033805.1 WAC-AS1 Homo sapiens WAC antisense RNA 1 (head to head) (WAC-AS1), 2e-22 111 68.34 0.270935960591133 0 noncoding 0 0 0 0 -0.235821869848856 0.143565619160823 -0.00682735949011282 0.904439884537583 AGTTGTGCTCAGCCATTGGTTGGCTCTGCTGTGGGCTCTTCCCCCAAGTGAGCAACTGTCACTGAGCAACAGTTAGTGGCCAATTCAGCAAACGGTCGTCAGAATGGTGGTTGTCAGGTGGAGAATGAGGTAAAAAGTGGATCCTGGCCTTCTCCCTGGTGCCCTCCATCTCACCCGGCCTCGGCCAGCGGTGCCATAACAAACCACTTGTGGAATCTTCATTCCTGTCCAGAAATCAAGCCCTGAGCCTTTGGAGTGGGAACACTGACTCCAAGACCCTAGACTACCAGAGAACTAACCCTAGGGAGTGTCAAATAGTAGGAAATCACACCAAAGGAAACCACTTGAATACAAGACCCAGGATCACCCAATTACCAGTAGCACCCTGTACAGGACACCTCATCTAAACAACAAACAAGACAAAAATAAAAACCCAACCAACAGCAGACAGGATTACCACCTCACTCAGCTTTGCCCATCAGAGGAAAAACAAACAAAAACTCAGCACAAATCTCACCCTATAAGAAGCTCACACAAATCACTGGACCAACCTCAGGAAGATAGAAACCAAAAGGAAGAAAGAATTAAACCATTTTTGAGGAAAGAATTCAACATTCCTTGAAGCCTGGGAAAAGGAGACCTCAAAACACGATAAGTTAAAAAAAAATAATTAAAAGGCAGAGAAATACTGCACAAGTGAGGGAACAAAGTAGAAACACAGAAGTCCAAATAAATGAAGAGGAAATAGGCAAACTCCCTGAAAAATAATTCAGAATAATAATAGTAAAGATGATAAAAAACCTTGAAAACAAAATGGAGAAAATGCAAGAATCAATTAACAAAGACCTAGAAGAATTAAAAATAAACATACAGAGACAAACAGCACAATTACTGAAATTAAAAATACTCTAGAAGGAATCAATAGCAGAATATATTAAGCAGAAGAATGAATCAGTGAGCTGGAAGATAAGATGGTGAAAATAACTTCTGAAGAGCATAATAAAGTAAAATAATGAAAAGAACTGAGGACAGTCTCAGAGACCTCTGGGACAATATCAAACACACCAACATTTGAATTATAGGGGTCCCAGAAGAAGAAGAGAAAAAGAAAGAGTATGAGAAAATGTTTGAAGAGATTATAGTTGAAAATTTCCCCAACATGGAAAAGGAAATAGTCAGTCAAATCCAAGAGGCACAAAAAATCCCATACAGGATAAA TCONS_00184551 r 5' 53984 TCONS_00184551 r 5' 53984 EMBV3_06051 AACTCCCCAACGGGGCGGTCTCTGAATACACAAAGGCTAGAAGAAAACACCTGTGCCAAG Gene BVV0102_107896 + 0 NULL GK000011.2:101517590-101592506 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026363 TCONS_00026361 TCONS_00026362 TCONS_00026364 1 XLOC_014971 Coding TCONS_00026363 XLOC_014971 Coding Coding PRRC2B 11:101572198-101648703 j TSS18896 11527 1 TCONS_00026363_13 2170 31 0.849733347275959 0.000179364104294545 8.53089893696395e-05 1.38134036507687e-05 9.40767546052818e-05 2.53972314776598e-08 9.2712911963754e-07 4.21842453024661e-05 5.09666992976704e-05 5.32360117994595e-22 1.68178602040509e-05 5.0054496936889e-12 4.26043416645274e-58 6.97410054730344e-06 1.21023625801274e-44 2.63782319879605e-37 7.79762214796874e-51 5.21905227078226e-18 2.86148511519045e-29 0.000156894757570389 7.5696799126393e-05 4.21902239493835e-05 4.92968397845127e-18 1.17693845927051e-25 5.58321952622055e-34 0.000405001398733233 0.000312665860602718 4.91631433191017e-05 2.78786989910514e-18 4.43440540321793e-48 1.05891579482674e-19 XM_005213446.1 PRRC2B PREDICTED: Bos taurus proline-rich coiled-coil 2B (PRRC2B), 0.0 1.238e+04 99.83 0.596686041467858 XM_005272228.1 PRRC2B PREDICTED: Homo sapiens proline-rich coiled-coil 2B (PRRC2B), 0.0 7757 83.93 0.620196061421012 TCONS_00026363_13 sp|Q5JSZ5|PRC2B_HUMAN PRC2B_HUMAN Protein PRRC2B; 0.0 3381 84.60 0.994930875576037 0 coding 1 1 1 1 -0.0785026879070394 0.559307248198609 0.0202947394575406 0.660279758436208 ATACGAGAGTGGGTGTTTCTGAACTGGGGGCTTTTCTAAGTGAATCATCATTTGAGGTCATTTTGGGCGCGCACGTTTCCCAAATTAAAAGCAGCGACTGTTGAAGGCTTCCTGTGGTCTGGTGTAGGATCTCAGCCTTTGATCGGCATTGACAGGCACAGCAGAGGTGGTGTTTCCCGAGGACTCCCAGTGCAGGTGCCTGGGCATCTGCTCAGATGAGGCCGGTGGGGGCTGGTGGGGCCGATGTGTGGAGAGGTGCAGGTAGCCAGGTTTACTTTGCTTTTCCTTTTCAGTTAAAGTCACGGTGCTTGGCACAGGTGTTTTCTTCTAGCCTTTGTGTATTCAGAGACCGCCCCGTTGGGGAGTTCTCACAGCAGCCCTTCCGCGGGTTTCTGAGGCTCGGTTACAGCCCTCGGTGGTCTTGCTGCTGGGATGCAGCTGACTGTGTGGGAGGGGTTTATCTGGAGGCCTCTGCTCTCTTGCTCCCAGTTCCCTACTCATCCACTTGGTCTCTGGCCCCCACTTTCCCCGCCTGTCTATTCTAGGAGCTCACACCTAGTGGGCAAAGTGACTACGGAAATGAAGACCCTGGAGATGCCTGGGTGGGATTTCATCAGGCCAGATCGGGAGCGGTGCCGAGAAAAATTTCCTTACTAGATGACATTTCATCGCAATGTCCGATCGTTTGGGGCAAATAACCAAGGGCAAGGATGGGAAAAGCAAGTATTCGACTCTCAGCCTGTTTGACAAGTATAAAGGAAAATCAGTAGATTCAGTCAGATCCTCAGTTATTCCTCGACATGGCTTACAAAGTCTTGGGAAAGTTGCCACGGCCCGGCGCATGCCACCACCTGCAAACCTGCCAAGCCTGAAGTCTGAAAACAAAGGAAACGACCCCAACATCGTGATAGTACCCAAGGACGGAACAGGATGGGCAAACAAGCAGGACCAGCAAGACCCAAAGAGTTCCAGTGTGACGGCCTCTCAGCCGCCGGAGTTGCTGCCGCAGCCGGGTTTGCAGAAATCTGTCTCCAATTTGCAGAAGCCGACACAGTCGATCAGTCAGGAGAATACAAATTCAGCTCCAGGTGGACCAAAGTCATGGGCACAGCTGAATGGAAAGCCAGCAGGACACGAAGGTGGTTTAAGGGCCTCAAGCCGACTGTTATCCTTCTCTCCCGAGGAATTTCCGACGCTGAAAGCAGCTGGAGGGCAGGACAAGGCTGGCAAAGAAAAGGGCGTCTTAGATCCGTCGTATGGGCCAGGACCAAGCCTCCGCCCTCAGAATGTGACAAGCTGGAGGGAGGGCGGTGGGCGAAACATAATTTCTGCCACGTCTCTGAGCGCCTCCCCAACTGAGCTGGGCAGCAGGAATTCGAGTGCGGGAGACGGAGCCCCCTCCTCGGCGTGCGCCAGCGAGTCTAAGGACCCCTCGCTCCGCCCGCCTCAGCCTGTCCGCAGAGGGGCTTCACAGTTCTTGGGGAGTGTATACCACCCACCTACATACCATGACATGCTTCCTGCCTTTATGTGTTCGCCACAGTCATCAGAGAACCAGGGTACAGTGGAACGAGGATCTTTTCCCCTTCCTCAGCTCCGTCTTGAACCCCGTGTTCCTTTTAGACAGTTCCAGATGAATGACCAAGACGGAAAAGAAAATAGACTGGGAGTGAGCCGCCCGATCCGTCCACTGAGGCCGCTGGTGGAGCGGGTGCCACGACCCACCATCGTCAATGCAGAAAACCTGAAGGGCCTCGATGACCTGGACACTGACGCCGACGATGGCTGGGCAGGCCTCCATGAAGAAGTGGACTACTCCGAGAAGCTGAAGTTCAGTGATGATGAGGAGGAGGAGGAAGTGTTGAAGGACGGCAGGCCAAAGTGGAACAGTTGGGACCCCAGGAGGCAGCGGCAGTTATCCTTGAGCTCTGCAGACAGTGCTGATGCCAAGCGCACCCAAGAGGAAGGAAAAGACTGGAGTGAAACAGGAGGCGTGACCCGTGTCGTCCGGAAGGTGCCGGAACCTCAGCCGCCTTCCAGGAAGCTGCACAGCTGGGCGTCAGGCCCTGACTACCAGAAATCCTCCATGGGCACTGTATTTCGGCAGCAGTCTGCCGAGGACAAAGAGGACAAGCCCCCACCGCGGCAGAAGTTTGTCCAGTCTGAGATGTCCGAGGCTGTGGAGCGAGCCCGGAAGCGCCGGGAGGAGGAGGAGCGCCGTGCGCGCGAGGAAAGGCTGGCTGCCTGTGCTGCCAAACTCAAGCAGCTTGACCAGAAGTGCAAGCAGGCTCAGCGGGCCAGCGAGGCCCAGAAGCAGGCGGAGAAGGAAGCTCCCCGCTCTCCGGGGGCTGAGAAGGTGACTCCCCAGGAGAACGGCCCTGCCGTCCACAAAGGCTCCCCTGAGTTCTCTGCCCAGGAGACCGCCAGCACGTTTTCAGAAGAAGCCCCCACAGCTCCTCCAGCAGTGGCTCAGAGCGGCGGCAGTGAGGAGGGGCCCCGGGAGGCTGGCTCCCCTGCACAGGAATTCAACAAGTACCAAAAGTCACTCCCTCCCAGATTCCAGCGCCAGCAGCAGCAGCAGCAGCAGGAGCAGCTGTACAAGATGCAGCACTGGCAGCCGGTGTACCCTCCGCCGTCCCACCCGCAGCGCACCTTCTACCCGCACCACCCCCAGATGCTGGGCTTCGACCCCAGGTGGATGATGATGCCCTCCTACATGGACCCACGGATCCCGCCCACTCGGACCCCAGTGGATTTCTACCCCTCGGCCCTGCATCCCTCAGGATTGATGAAACCCATAATGCCCCCGGATTCCCTCAGTGGGACTGGCTGTCGCTCTGAGGACCAGAGCTGTGTGCCCCCGCTGCCAGAAAGGAAGGTGACCGCCATTGACCCTGCCCCCGTGTGGAGCCCTGAGGGTTACATGGCGTTGCAGAGCAAGGGCTACTCGCTGCCCCATCCGAAATCCAGCGACAATATGGCCATGGACATGCATGTCAGGAGTGAAAGCTCTTACTCTGCCTCCCCCGGAAGGTCAGGGGGCGTGAGTGCCCAGCGCGAGCTCCTTGAGGAGAGAGGGCAGGAGTACTTGAGCGCTTCTGACAAGAAGGCCCCAGCAGACTGTGACTCCCGTGTCTCCTCTCAGAGAGTAGGCCAGGAGCTTTTGTTTCCACCCCAAGAAAATGGGCAGGAAGCAGGCACTCCTGGGAGTCACACCCCAAACCTCAGGTGCTCCCCACTGGAGCCCGACTTTGCCCCCACGGAGAAAAAGCTCGAGTATGGTGACTGGGATGTGAACCACCAGTCAAAGGTTGCCAACCCAGACGCTGCGGTTGAGAAGGAGGTACCGCGGGAGGAGCCACCCTTCAGCGTCTCCTCCTGGGAGAAGGAAGGGAGCCCGAGCAAGCCGCCGGCTCTGGAGCCCGAGTGGACGCCAGAAGCCCGGGGCACTGGCAGCCAGCACCCGGAGCAGACCAGCAGGACCCGTAGGTCCGGCCCCATCAAGAAACCTGTCCTGAAGGCCCTCAAGGTGGAGGACAAGGAGAAGGAGCTCGAGAAAGTAAAGCCGGAGCTGGCAGAGGGCAGCACCCGCCTGGCCCGGGAGCCAGGGCCTGTCCATGAAGTGGCTGAGGACGAGGACCAAGAGAACGACCCCGCACTGGCCAATGCGGCCCCGGCCACCTCGGAGGACCAGGGCTTAGCCCGTGCCAGCTTGGGCCGTGAGGCCAGCCGTCCTGAGGAGGACAACAAGCCGGATGGGGCCCCGGAGGCCAGACCCTCCAGGGAGGCCAGCCACACACCCCCGACCAAGAGGAATAACTGGATCTTTATTGATGAGGAGCAAGCCTTTGGGGGCCGGGGGCCAGCCCGGGGCCGAGGCCGCGGGTTCCGAGAGTTCACCTTCCGCGGGCGGCCCACCGGTAGTGGCCTGTGTGGCGGGGGCGTCCTTGGGGCACGCGGCCTCTACAGCGGCAGCCAGAGGAGTAGCCGGGGCCGGGGGCCGCGGGAGTTTGGGCCGCCGGATGACTTCCCCCGGGCCAAGCCCCGGCGGAGGATTGCCAGTGAGACCCACAGCGAGGGCTCTGAGTATGAGGAGCTCCCCAAGCGGCGGCGGCAGCGAGGCACTGAGCCTGGGGATGAGGGTGCGCTCCCGGAGCGGGAGGAGGCCACGGGAAGGAAGGGCGACTTCAGGGAGTCCTGGCGGTCCGGCAGGATGCACCCTGAGGACCATGGTGGGCCTGAGGCCAAGAACCGAGGTCCCCGGGCCTTCGGGCGTGCCCTGCCCCCGCGTCTGAGCAACTGTGCATATGGCCGGAGAACCTTCGCGGCCAAGGAGGTGGCCCCTTGGCCCAGCCGGGGTCCTGGCGCCTCCTGGCAGGAGTCTGGCGCCTCTGACGCATGTGGAGCCCGGCGGCCCTTAGACAGAGACTACATCCCAGACGCCTACAGACGCCCCGACGCCTTGGGCTCCCGGGGCTTCGAGGATGGCCGCCTGGAGGACCGGAGGGCCTTCTTCCAAGATGACCACGCCGCAGAGTCCGAAAACGCAGAGAACCGGCCCTTCCGGCGAAGGCGGCCTCCGCGCCAGGACAAGCCGCCCCGCTTCCGGCGCCTCCGGCAGGAACGGGAGGCCCTGGGCCTGTGGGGGCCGGAGGACGAGCCACCTCTGGCAGCCGGCCAGTGGCCAGGCCGTCCTAGACCCTGCCCCGGGGACAGGAGCAGCGCCTCAGGCCGCAGGTCCCCTGAGCTCGCCTATCAGAACTCCTCCGACCACGCCAACGAGGAGTGGGAGACGGCCTCCGAGAGCAGTGACTTCAGCGAGAGGCGGGAGCGGCGGGCCGGCTCCGAGCTGGACCCCCAGGCTGATGGCAGCCCCTCTGGGGTGAGCGCAGGCGAGAAGAAGGAGCTGGCCAAGCGGAGCTTCTCGGGCCAGAGACCCCTGGTGGACAGGCAGAGCCGGAAGCTGGAGCCGGGAGGGTTTGGGGAGAAGTCTGTTAGGCCAGGTGGCGGTGACACTTCTCCCCGCTATGAGAGTCATCAGAACGGGACGCCTCTGAAAGCCAAAAGGTCCCCAGACGAGGCCTTGCCTGGAGGTCTTGGCTGCGGCAGTGGGAGCGGCCATTACACGCTGGAGCGGGCAGCCCATGCTGCCTCTGACGTCACCGAAGCCTCCTGTGAGAAGGTAGAGAAGGAGGCCAAGCTGGCCGCCCAGAGGTCAGGCGAGCAGGGAGAGACCATGAAACCATTTGACCTGAACTACGGACACGCCATCATTGAAAATTGCGGATCCAGCCCTGGGGAGGAGAGTGAGGTGGGCTCTCTGGTGGGCGAAGGCTTCATTGAGGTCCTGACCAAGAAGCAGCGCCGCCTGCTGGAGGAGGAGAGGAGAAAGAAGGAGCAAGCCGTGCAGGTTCCTGTCAAAGGCCGAAGTCTCTCCTCTCGAATTCCTCCTCGGTTTGCAAAGAAGCAGAACAACCTGTGCCTGGAGCAGGGTGATGGGCCTGTGCCCGGCAGCAGCCTGGGCACCGAGATCTGGGAGAGCGGCAGCCAGGCCCTCCCCCTTCAGGCCTCGACCAGTGACTCCTGGACCAAAGCTGCCACTGCCTTCACCAGCGCTGAGCCTGGCTCTGCTGAGCAGGGCTTTAAGAGCAGCCAGGGAGACAGCGGTGTTGACCTGAGCGCCGAGTCCCGAGAGTCCTCAGCGACCTCCTCGCAGCGCAGCTCTCCATATGGCACCCTGAAGCCCGAGGAGGCAAGCGGGCCCGGCCTGGAGCCCAAGGCCGATGGCCACAAGGAGCAGACTCAAAAGCAGTCAGAGCCAAAGGATTCAGAACAAGGCTCAGGACAGAGCAAGGAGCACAGACCAGGACCCATTGGCAATGAGCGCTCTCTGAAAAACAGAAAGGGCTCCGAGGGGGCTGAACGGCTGCAGGGGGCTGTGGTTCCCCCTGTTAACGGGGTGGAGATTCACGTGGACTCTGTGCTGCCGGTGCCACCCATTGAATTTGGAGTCAATCCGAAGGACTCTGATTTCAGCTTGCAGCCTGGCTCTGCCTCTGGTCCTGCGGGGAATCCAGTTGTCAAGCTTCAGGACGCATTGGCCAGTAACGCCGGGCTGGCCCCCAGCATCCCCATCCTGCGGCGGGACCACCACATCCAGAGGGCCATCGGCCTCTCCCACATGTCCTTCCCTACCGCCGACCTCACTCTGAAGATGGAGTCTGCGCGCAAGGCTTGGGAAAACTCGCCCAGCTTGCCGGAGCAGAGCTCGCCAGGAGGCGCCGGCTCAGGCCTGCAGCCCCCATCCTCCGGGGGAACCTCCAGCGGGGTCAGCTATAGCTCCTTTGGCGGCGTCTCCATGCCCCCCGTGCCAGTGGCCTCGGTCGCACCTTCTGCATCCCTTCCAGGCAGCCACCTGCCACCTCTCTACCTGGATGGCCATGTGTTTGCAAGTCAGCCCCGACTGGTTCCTCAGACCATACCTCAGCAGCAGAGTTTCCAACAGGCTGCCGCTGCCCAGCAAATCCCAATTTCCCTTCACACGTCTCTACAAGCTCAAGCCCAGCTGGGACTGAGGGGCGGGCTGCCCGTCTCCCAGTCTCAGGAGATCTTCAGCTCCTTACAGCCCTTCAGGTCTCAGGTGTACATGCACCCCAGCCTGTCACCGCCCAGCACCATGATCCTCTCCGGAGGCACAGCCTTGAAGGCCCCCTACTCGGCGTTCCCAGGCATGCAGCCCCTGGAGATGGTGAAGCCCCAGTCCGGCTCGCCCTACCAGCCCATGAGTGGGAGCCAGGCCCTGGTCTATGAGGGCCCGCTCAGCCAGGCGGCTGGGCTTGGCGCCTCCCAGATGTTGGACTCCCAGCTCCCGCAGCTGACGATGCCCCTGCCTGGCTCCCAGCTGCCTCTGCCCCGGTACGGCTCCGGGCAGCAGCCCCTGCTCCTGCCACAGTCCATCCAGCTGCCCCAGGCGCAGAGCCTGTCAGTCGGGGCCCCCCGCAGGATCCTTGCCCCCGGGTCCCAGCCTTCGGTCCTCAACACCAGCAGAGAGTCCTCTCAGATGGAGATGAAGGGCTTCCACTTTGCCGACAGTAAACAGAATGTTCCTTCAGGAGGCTCCGTGCCGTCACCACAGGCCTACAGGCAAAGCAGCGAGTGGATGAAAAGCCCGGCCTGGGAGCCATGAAGCTGCAGGAGCCACCCTCAGCCGCTTCCCCGCTGAAGCGAACTGGAGCAATCAAGCCCCGGGCGGTCAAGGTGGAGGAGAGCAAGGCCTGAGGGGCTGGGCCCGGCCTGCCCGGGAGGACTCTGCCCTTGGCCTCGCCACCGCCTGATGCTGGGGAGTCTCACCGAGGGATCCCCTGTCCACCTGCCTGGCCCGGACTTCGAGATCTCCCTTCTCTCCTCCACTCCCGAAAGCTCCGTTGTCCAACCGGCTTGTACCCGTGGATCTCTGGCATTGACCTGCTTGCTTTAATACGAAACGAACAAGCAAATGACTCCATTCCCATCTCCTTTCCATCACGACCGCGGAGTGACCGAGCGTGGAGTGACCGAGCGTCATGCCATGCAGACTAACCCCGCCCTCCCCCGCTTCTTCCCCTCCCCGCCTCCCGTCCCCGGGCACCGTGGTCTGGCAGCAGGGCCGTTTTAGTTTGAGGCTTTTTGTTTTAAAAAGCAGCTACAGGTTTTTACAGAAGAGAAAGGAAAAGAAAACAAAGACACAAGCTTTGTATAGCTGGACTTTGTCTGTCTTTTGCCACCCTCTCGCTGGCCGCCTCCTATCGCAGTAGTTTGCTGTCACCTCCCCTGCTCGATGTGGTAGGTCGCTGCGGTACCCGCAGGGGTGATGCTTGGGAGCACACCTCTTCTGCTCTCTCTCTGCTGGTTACTCGTAGAAAGAAGTGGTTTCAGACACTGCTCCTGAGCTCAGGAAGCGGTGACTTGCGGGGGGTGGGGAGCAGGCAGGTGGACTGGCATTTCAATGGCTTCCAGCCTCTGGGCTGATGACCACAGGGAGCTTATGGTCAGCCCATTGACGTTGATGTTTTTAGCGTAAGAATGACACAGAACTTCTATCTCAGACTCTTCCTAAAGCTGGTGGGGACATTGACCACTGGGAACCTGAGGTGAATCATGAAAATAAAAGGCAGTGGTATGTCCCGTCTTGACCAGGGTGGTGTGAGCTGACAGCACCACCCACCCCCTGCCCCCCATCAGTGCCTGCTGCACCCACAGGGCCTGATGTCTTCTCATGCTCCCTCTCCTCCGAGCTGCCTTGTCTCTCTGGGTCCTCTGTCCATCCACCTCTCCTGCAGCTCAGCACTGGAAACCCCGCTGTCCTCTGTGGCGACAGGCGCCTGGACCATTGTCACAGGAGGTGACAGGTGTGGTTGGGGCTGTAGCCGCAGCCTGAGCTCTGGGAGGAGGCAGGAGGGCTTGCTTCTCTCTCTTTCTCCCCTCCCAGCTGTAGGCGCAGGCTATGGGGCCGGATAGGCCTGAGCGGGGCAGTGGGGTCTCCAGTCTTTCCAGAGGCCAGAGCAGGGCCCAAGGGGAGGTGGGCGAGTGCAGGGCTGGCAATGCTGCCGAAACAGCCCGCCTAGCCTGTTAACGTGTGCAGAGCTATTGCTGTCCAAATGTGGAGGCATTTTATGCTAAGTCTCTGTTTGATTTTAAAGTAAAAACTAGAAGGAAATCATCCTAAATTCCAAGGAAAGGTGAGGGGAAATTTGAAGTTTTGCCTATGCTCTTGAGAGAACTAAGCGCTCATCAACCTGCTGTTGCTGGCAGGTCTGGGGAAGACTTGGCTTGGAGGATGGGAAGCAGGGAGATGGCATGGCCCGCAGGGTCCGCCCGCAGCGTTGCCCCAGGTGGTGACGGCTACTTGGGCTGAGACTCGAGGCTCTGTTTGGTGCGGAATGCTGGGAAAGAAGGGCCTTAGGAACCGTTGTAGGCACTCGTTGCTCTTCGCTGTTTTAAGGAAGTGTGGGAACAACAGGCTTCTGGCAAAAGGTGCAGGGTTTCAACGGTTAATCAGTGGTGTCCAGCACTCCCCTCCTTGCCTCCACTCTCAGACCTTACTTCTCACTGGTGTGTTATTTTGTTTTTTCTTCTCCTTCATCCCGGAGTTTTTACTCTGCAGTCCTTTCTTGCAGGGCTGCCACTGGATGGAGCTCCCTGTGCGCTCACCTTCCCTTTTCTCCCTTCCCCCGCAAGCGCCTGGCTACTGTCCCCACTGAGACAGGGCTCCCCTCCCCTCCCGTGGCCCCTTCAGGGGCCTCGCCCTCACAAACAAACGTGGCCAGACCCCTCACACCTGATTCCAGTGCACATTGTCAAAGGAAAAAAGGCTTTCTCGTCTCGAAATGCAGCAGGACAGGCCTGCACACTGTTACAAACTCGTTAAGAGGTGTCCTCTCAGGGGACCTGCCCTCAGAGTGACAGTGCTTCCTGTTTGAGGAAAAAAATGAAAGGGTCACCTGTTCCCCAGCCCTTTTCTCTACCTACTCCTGTGTCCCCCCCACCCCCAGTAAAAACAAAACACTAGAATTTATTTATATGTATTGATGTCGTAGGTCTAGGTGGAAAAAGAAGTAAATGTTTCACTGCTCTATTTATATATAATGTCTGAATTATTCTGTGCAGGAAAGGCCAGGAAAATTGCATGTGAGGTTCAGTGCGTTTACCACCTTCGTGTGCCCAAGCTGTAGCCTCTTTCTGGATGAGACACAGATTTTACATTGAATTCTGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCCTTGGTCTGATGAAATGCAGTAATTAATGCAGAGATGTTTTGGGGGGCAATCTCTCTCCTTTCATGTGGTTTTAGAGCCAATCTCCAGGTAATGGGACTTGGGGTCATATTTTGCCTTCACATCTCCATCCTCAGAGTACAAATCCACACAGAGGCCTCTGCCAGAAAGCCTTGGGTCGACTAGCGCGAACACGTAAACACTAGAACTCAACAATTTTCTGCTCCTGGGCAGGGTCAGGGGTCAGAGCCCTCTCACTTGGCCTTCAGCTGCTCAGATTCCCCTGCTTTCCCATGCTGGCTGCTCCACCCTGGCCGCTGATGATGCATCCTGTTCCTCGGCAGCCAGTGACCCTGTAGCACGGTGTGTCGTCCAGCATCAGTTCCTCTATGGGTAAAACCCAAGAGCGTGAGCTCGAGTGCCCACGCGGCCTCATCCACCCCCTGAAGGCTTCTTTGCCAGCTGTATTTGGTCTGGTTTTTGTTTCCCGTTTTGAATCAATGTTACTGTTTTCAAACTTGGAATTCCTACACTTTGGGCTCCAGGTTCCTTCAGGGAGAAAACTAAAGAATGACTATTACCCAGAAAAATCGGTCGGTCCGGTTCCAAAGCCATGGTCATTGCAGCAACTTCTGGGGACACTGGGGTGTCTTGTTACATATTGACATCTGTTCTGTCCAGCTCTGCCCTCACCCTCCTGTCTTGTAGATCTGCCTTCTGGACGGTTGACGAGGTTTGCCAAGGGCTGTGGAGGCTCAGAGTGTGCACTCACAGGCATGGTCTCAGAACTGGCCCGCTGAGGCAGCATGGGGTCAGCGGCTGAAGCCCCCTCCCTCCTGTGTGGTTTCCCTTCGTCGAGTAGCTGCATGTTACCTCTCAAATCTGTATTTGTCCCATTTTTCTTCTTGCAGAGCTAGCCTGGGTTAGAAGGTCTGTTGGAAATGGCCTTCGAGCACCAAGGACGCTAGGGTACTTAAACTTAGTACTGTTCTGTGATGACTGGGAAATGCAGACTTCAGAAAGCTGGCTCTTCCAGTTTGAAAAGTGAAGCGGACCTAAGACATCACCAGGACAGGAGCGGCTCAGTGTTGGCGTTGGACGCTGTCGCCCAGCCGTGCCCTCCACCGGGACCACCAGTGCACATCTGGCCAGTGATCTTCCAGGCGCATCCAACCTGCGTTCACCATTTCTCCACCCCAGTTAGGTGACCTCCAAGAGGCAGCAGTGTCCTTGAGGCCCTGCCTTCGGCATGTTACAAAGCCTCAGAGCGGAACTCTCTGCTGAGGCTCTCTGTGGATGACCTCCTTCCATGGTGAAAAGGGGGTCCTGCACACCAAGCTTTCAACCTCATGCCTTGCATAGTAAAAAGCGTTAGGGTTTTTTTGTTGAGAGGGTTGTGTTTTTTGTTTTTGTTTCTTTTTGATCTTATTTTGGCCTTTCCTATCTTTGTCTTTTCATGTAGACCAGATATTTGAAAGGGCAGACGATGGCTAAAAGGTGTAACGTGCAGCTTGTTTCTACGTGGTTTGGGGGAGCTTTTACCTTAGATGGGAAAATGGAACCCTGGATTCACCAGGCCATGGTGGCACCCTCCTCCTTCACCCTTCCCTCCGGTTCAGTACCTGTTGTTTCTCCTTTCAAATATGTGATTGTACTAGCTCTTTCCATATGAAAGAATTCTCCTTATTTAAATAAAAAAGTTTAAAAAAAAGACCCACTGAAACCAAACAT EMBV3_19660 GACAAATACGGCCTGCAGCTGAATCCAGAGTGGCGCATACTGAAGAACAGACCTTTCCTG Gene GeneID:509212|PIH1D1:NM_001075395:169_cdna Constitutive 3 NULL GeneID:509212 18 GENE PIH1D1 MGC142550 PIH1 domain containing 1 EMBV3_11239 GCCTTCGATTGGGATTCATTTTGAAGAATTTGTCAGAGAGCCTACACTCCTGCTTCTAGC Gene BVV0101_022290 + 0 NULL GK000024.2:59671929-59792682 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02770 ACCTTGTGCCTCGCAAGCCCCCCTTCCCGGGGGATGTTCCACCTGGAATTAGAAATATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32199 TCGACATGTGTCCAGCTCAAGATTGGTCAGTGAAATCAGCTTCCGGGCTTAGAGATCCCT Gene GeneID:512524|SUSD3:XM_002689847:30_cdna Constitutive 0 NULL GeneID:512524 8 GENE SUSD3 NULL sushi domain containing 3 EMBV3_28921 AGGAGCTTTATTCTCAGAGGAGGCACTGATGCTTATAACTCTGGGGAGAGACCTACACCC Gene GeneID:615878|TBC1D22B:NM_001099148:65_cdna Constitutive 0 NULL GeneID:615878 23 GENE TBC1D22B MGC137912 TBC1 domain family, member 22B EMBV3_08169 GTCAAAGAATGTTCTGCCTATGTTTTCCTCTAGGATATGTGTAATATCTGACCTTACACT Gene BVV0102_069832 - 1 EMBV3_14366 GK000008.2:95961627-95971529 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10760 ATACTAGATGAGAATCAGCTGGAGGATGCATGTGAACACCTGGGAGAGTACCTTGAGGCC Gene GeneID:282161|CACNB4:XM_002685355:236_cdna Constitutive 0 NULL GeneID:282161 2 GENE CACNB4 NULL calcium channel, voltage-dependent, beta 4 subunit EMBV3_37731 CCAGCAGGTATTTGAGTACAGCATCCCAGACAAACAGTATACGGAATGGAGCCGGACTGT Gene GeneID:510315|CIRH1A:XM_002694835:736_cdna Constitutive 0 NULL GeneID:510315 18 GENE CIRH1A NULL cirrhosis, autosomal recessive 1A (cirhin) EMBV3_37292 TTAGAGGCCAAGAGAACTAAGGGCACTATGCACAAGGAACAAAAGCTCATGAATTCCTCC Gene BVV0102_116429 + 1 EMBV3_33694 GK000011.2:65826763-66471948 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028114 TCONS_00028113 TCONS_00028111 TCONS_00028112 1 XLOC_015411 Coding TCONS_00028112 XLOC_015411 Coding Coding C1D 11:66467045-66490145 j TSS19787 5257 1 TCONS_00028112_1 141 0.138291801407647 6 0.772674141737738 0.000320152181342259 0.0003300693693258 0.000143260102706499 7.86700881371818e-05 0.000196554433411018 6.23683247259639e-05 3.0366480207862e-07 0.0001592017692056 0.000626552270630201 6.46258592100389e-06 9.38187340952131e-07 5.53302170332413e-06 7.37030670271479e-09 7.61500078421887e-05 1.14204537377665e-08 0.000967595568978787 0.000987295963985242 0.00203144528428462 8.82281558115668e-05 3.19128037431012e-05 0.000115374924444534 5.94681391850971e-09 0.000719038469650188 0.000306841342817418 7.89904062409328e-06 2.85326894384195e-08 5.36476156140323e-05 0.00012331484588234 1.23396284698575e-10 2.31178005125666e-15 XM_005212844.1 C1D PREDICTED: Bos taurus C1D nuclear receptor corepressor (C1D), 0.0 7384 99.98 0.779151607380635 NM_006333.3 C1D Homo sapiens C1D nuclear receptor corepressor (C1D), transcript 0.0 695 84.20 0.123834886817577 TCONS_00028112_1 sp|Q32PE4|C1D_BOVIN C1D_BOVIN Nuclear nucleic acid-binding protein C1D; 4e-101 290 100.00 0.99290780141844 1 coding 0 0 1 1 0.0628550189504892 0.848140012762945 0.0487181383892855 0.433718991593605 GAGTAGCTTTCCCTTGTCATCCGCCTTTATCATTTAGTTGATCATAATGGCAGGTGAAGGAATTAATGAAGACTATCCAGTAGAAATTCATGAATATTTATCAACATTTGAGAATTCCATTGGTGCTGTGGATGAAATGCTGAAGACCATGATGTCTGTTTCTAGAAATGAGTTGTTGCAGAAGTTGGACCCACTTGAACAGGCAAAAGTGGATTTAGTTTCTGCTTACACATTGAATTCAATGTTTTGGGTTTATTTGGCAACTCAGGGAGTCAACCCCAAGGAACATCCAGTAAAGCAGGAACTGGAGAGAATCAGAGTATACATGAACAGAGTCAAGGAAATAACAGACAAGAAAAAGGCTGGCAAGCTGGACAGGGGTGCGGCTTCAAGATTTGTAAAAAATGCCCTCTGGGAACCAAAACCTAAGAATGCATCCAAAGTTGCCAATAAAGGAAAGAGTAAAAATTAACCTTTCAGTTTCAATGTACACATATTTAAAAAGTACATAATTTTTATTGTTTTCCACAAAATGAATGATGATTATGTGGCACTGTAAGGTTTAAAAGTATTCCTTACTGGAATCATGTACAAAACTTGCATTTGAATTTGTAATGCTAAGAACTGTTTCCTCCAGAAAGATTGTTATCTTTATTGGTTTTCCTATAGAACACTATGAGGTTTTTAACATTGTAGTATGTGTGTGTGTGTATATATATATATAAATATTTTATTTTGTATGGGAGTATAGCTGATTAATAGTGTGACAGTTTCAGGTGAACAGCGAAAGAACTCAGCCCTACATGTACATGTATCGATTCTCCCCAAACTCCTCTCCCATCCAGGCTGCCACATAACACTGAACGGAGTTCCATTTGCTACACAGTTGGTTATGCATTTTACATTTATGCATACATTTACAGCAGTGTGTACATGTAATCCCAAGCAAAATTGTAGTGTATTTTATATTTATACTTTACTGTCTCTTGACCAGACTCTGATTTGCTTAGGTCAGTCTTTCATGTGCCATTTTATAAGCAACTATGAAGTTTAAGTTAAATGTTCCTCGTAAACATTTGTCTATTTCGATGAATAATGATTTTATGAAGTATGCCGAAGTTATAAATACATCTGTTCTCACTATATAATATTAAGAAAGAGTGAAATGACTTAAATGTCCATTTTTTTCTGTGTAGTTATTTCATTATGCTGTCATGATTTTGGGAATTACTGCTTTTTGTGATATTTGAAGTATGAAATTAAGACTTTAAGGTTATTCTTTAATTCTTGGCACTTTGCCACGATGTCCCATTTAAAGTAAAATACATTCTCATTAACTTTAGATAGGAAATGAGGTTGTATATTGATGGCTGAATTTTGGCATAATAGCTATACCCTATCAAAGCTGTTAATGCATGGCTGACCTGTTTTTTATTTTTCTCTTTTGCGTAAATTTTTCCTTGAAATCAGGAAGGTAGGTTTTAGAAGTCCTTAGAAATGGAGGAATTCATGAGCTTTTGTTCCTTGTGCATAGTGCCCTTAGTTCTCTTGGCCTCAATTTTTTCAGATGTTTTTAATATTTATGAGACTGTAACAAGTATGTACAAGTATTTTGGAACAACTTTGTATGTTACATAATGTCACTTAATCAGAGGAGGAATCTGAAGGAGAGTACATTTTATTTATATTCTGTTTTATTTTTCTGTAATATTTATTACTGAGAATTCTAAATATTAAAATTTTTTAAATATCTAAGCCCATGAATTTTAATTATATACCCTTAATGCTTTCAGTCTTTGAATTCACATCATTATGTATAGGAGTGCCAAACACAGCAAAGTACTTGTACTTTAATTTTTGAAAAAGAAGTTGTTAAAATTTTCTGTGTGATTAATTCTCCATAAGTAACCTTGAATAAATGGATTTCTTGATTTATGATAGCAGATATTGGAAATGGTCTTAAAGTATAATGGATTTTGTAAAGCATGTTGAACTCTTTCTGTGACACATGAAGGAATCACTGATAGATGCAGAAAGTCTGGCTCAGATGTCAGGCAATTTTTGAAGTAGAAGCGCATTTATAGTTATTTCATTCCTTGTTTTACCTTTATCTCTTCTAAATTCCAGTTTTTTTTTTTTTTTAAGTAAGTTCATGAGAGAAATAAACGTTATTAAGATCAAGTGTAGTGGCTTTGTTATTTATTGCAAAGAAGGTTATAACTTGCATTTCTTTATGTTTTCTCATTTCATCAAGAAAAAAAGATTAAATGAAAAATGTCATAGAGTTGCAGAAAATCATTGGCCAAATTATTGGGTTGTGAAAGTCCAGCTCTTCATTCTCTTATATTTTTTTAACTATTTTATATTGAAGTATAGTTGACTAACAGTATTGTGATAGTTTCAGGTCTGCTTTTTATTCTCTTAAACTCGAGATTCTTTAGTGAATAATTCTTTTAAGTGTTTATCAGAAGTAAAAAAAAGCAGTTTAATTGTATTCCATTTTATTAGGTATGATTTTAAATACTATTTCTTAGCACATAGTAAAGAGCTGAATGATAGTAAGTGCATTGGGTTGCTTATTTTCTATTTATTCATTTCACAGATATTATACCTAATGACATTTGCATTGCTAAATACAGTGTTAGGTTCCAGATAAGACAACTCCAGCCTTTATTCTATTTTAAGAAAGTATTACAAAAAAACTAAATCTTTCATTAAATTCAGTTTTTCAGAGTTACTGGAAAATTTATGAGAAGTTGTGCTCATTAAACTAGTCAGAATCATAAAGGGTGATGGGTTGATCTATTTGACCATGAAACAGTTATTGTTAAAATAGTTTGTTCCAAATGACCGTCTGCTCTAAGTTTAGATGTTAATTACATCTTGTATTAATCTCTTTGGGAATTAACAAGTTGGAGAGGTTATAGCTATAGATATTTTTTAGATTAGAATTATGGACTGTTAATCTAATACTAAATAATGAGATTTGGTCTTTTAATATTTTAAGTACAATTTTCTTCTTGTTCATGATTGCAAGATGGGAAGTCATTTTTGTAAAGTTGAATATGTTAAGAGGAATATTGAAGCTTGAATTATGGTTTACATTCCTGGAATTTAAGGTTATGTCAACTTGATTGGTTTTTAAGATACCCTGCAGATTAAAAAATTGTTCTACTTGGCAGTTAGAAATGGATTAGTGTTATTTCTAAATAAAACTTAAAAAATTGACTAGAAGTGTAGGAAGTACTTAAAAATGGACAGTATATTGAATACAGATACTTTTTCTCAGATATAGGTTATTGGATAAAAAGCTGTTTTAGGAAGCAGTTTATGATATAGTTAGACCATAGTTTTATGCATTTAAATTATCAGAAATTCTGGCTTTAGTGAGTGACATTAACTGAGAAAGGTTTGAATAGTGATTCTGAACTAAGTTTGGTAGATAAAGTGGAGAAAAAGAGGCACTGGCATCTCATTTTCTCACTTCATAGCATAGTTAGTAAACTTGCTCTGATAAAGATTCTTTAAACTGAATAGTAACCTATTTTATGTAAATGTGATCTGAATGTACTTAACTAACATTTCCTTTTCCCTATATCCTGGTCTAAAATGTATCAGTTTTGGAAATACAAACCATATTTTGTTGATTTTTGTATATTAGCATTTTATAGTTGTCATTAACAATTATGTTAGGGGTAAAGTATACAGGGTTTTATTCTGTTTGTTTTATTTGATTAATTTGCTATTATGTTGCTTGTGAGTAGGATTTCAAGAAAATGCTTTGAATGATTTTGGTTTGCAGATTCATTTTCCCTTCAGAGAGCAGCCACCCTCTGACTTGACTTTTCAAGTGTTTATTTTATGGTATAATTTCAGTATAACTAGAAAGATTAGTTAAAGCTGTCCGGGAAAGGGAGTAGTTATAGTGATATCTATTGGCAATTGAGGCTTAATCTTAACTCTGTTACCTCCTACTGCCCCCCGCCTTAGGCCAGAAAGCAAAACCAGCCTAGCTCTTTATTACTCATCTGTTATAAAAGGTTGAGAAAAGATGCCAGTCCTCTCCCCGACTCCCCACCCCTGATAAACCTTGAAGTCTGGCAAATGTGTCATGGCAGAATAATTGCAGTTTAGTGTTGCCTTTAAGGTGTGCCATTTCAGTTTGGCAGCTACAATAAATGACTGAAGGAAATTGAAGATGATAATTCAGCATTTCAAGATGCTCCTGCTGAAGTGAATGTAGACCTATCCAGGGCTTGAATTGAAAGTTTATAGTAATACAATATTTTAAAGCCAAGTACCCAGGAAATTCATGGTGATAGGATTTGAATGAGATGATTAGGAGAAATAGAAAAGAATTCCTTCACTTCCTTATTAGGTGGGTATTAGCTATTGAGAGGCTGTGTTGAAAAATGTTATTGTAAAAAGGATAGAGGCTTTTTATATGCAGTTTTCTATGGAATATAATTCATCGTGGACCTTGTCCAAAAATGTTTGGTTATTAAAATAACATGATTATAATAAGGAATCACTTCTGATTTAGTGTTATAGCATTTTGTTGCCTGTAGACCATGTTGTGCTGTATTTGGGTGGTACTGTTTCATTTAGTGACTTGATTTCTCTATTAACACATTCCTTATTAAATTGAAATTATTTACCACACCTTTTCTGATCCTTCTTTGTTATTCTTCCCTTGAGAAGGTAATCATTATTAAAAGTATATAGAAACATTTGGGGTGCGTGTTTTTTTTCAGATTACTGATTTAATTTTTTTCAAGTATAAAACCAGGAGTGGAATTGCTGGGTCGTATGGTTAGTTCCATTTTTAAGTTTTTCAATGTCTACAGCAGCATTGTTTACAATTGCCAAGGTATGGGAGGAACCTAAGTGTCTGTCAACAGATAAATGGATAAAGATGTGGTGTATGTATATACAGCGAAATACTACTCAGCCATAAAAAGAATGAAATTTTGCCATTTGCAGCAAATGACGATTTAGAGGGTATTGAAGTGACTTAGCAGCAGCAGCAGGAGCAGCATGCTAAGTGAGATGGGGAAAGACAAATACTGTATGATGTTACTTAAATGTGGAATCTAAAAAATACAATAAACTAGTGAATTAAAAAAGCAGACTCACAGATACAGAGAACAAATCAGTGGTTGACAGTGGGTAGAGGGAAGGGGGAAGGGCATTATAGCATGGGGAAAGGATGTATAGTTGTTGCTGGGTTTTATGGGTTTTGACACATGTGAGTTTC EMBV3_38030 CAAGTCTGTCTGTGCCCCATAGCTGCACAGAATGCTTCACTATCACTAACTGGATATTCC Variant GeneID:508864|ZBTB20:XM_002684783:11_cdna 130^203 1 EMBV3_21789 GeneID:508864 1 GENE ZBTB20 NULL zinc finger and BTB domain containing 20 EMBV3_39194 CCAAGTGTTGTTTGCATGGCGTGATACATAGGTTGTTAGTGATGCTGCTCCCTATGTAGG Gene BVT0102_122407 + 0 NULL GK000022.2:44169289-44179955 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04505 TTGCTTACCCTTGACGAGTTTTACCTAAAAATTTTTGAAAGTTATAATTTCATGGCCTCT Gene GeneID:514024|IFT74:XM_002689495:28_cdna Constitutive 1 NULL GeneID:514024 8 GENE IFT74 NULL intraflagellar transport 74 homolog (Chlamydomonas) EMBV3_13852 ACTCACAGAAATCTTACTGTAAATCCAGCTTCAGGGTCTGTGACAACCCATCACCCAGCA Gene BVT0102_131460 + 0 NULL GK000015.2:64326857-64346632 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07668 TTTGTTGTTGACCGCACCGTTCGGCCTGCAGGATCTTAGTTCCCTGACCTGGGAAGAAAA Gene BVV0102_351937 + 0 NULL GK000029.2:37937147-38005198 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25032 CCCCTTTCCAGGCTTGACTCTGGCACACTCCTTCCCACAAATTATTTAGCCTCCAGATAC Gene BVV0102_192106 + 0 NULL GK000001.2:73976721-74382911 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004022 TCONS_00004019 TCONS_00004013 TCONS_00004018 TCONS_00004021 TCONS_00004015 TCONS_00004017 TCONS_00004014 TCONS_00004020 TCONS_00004016 1 XLOC_000961 Coding TCONS_00004020 XLOC_000961 Coding Coding OPA1 1:74379848-74467698 j TSS2028 6666 1 TCONS_00004020_5 978 0.0460546054605461 31 0.924472674703184 0.00498255017530334 0.00410368180869774 0.00476317230618071 0.0030131590310655 0.00479566766529607 0.00192890953980241 0.00202484739970394 0.00410443063331424 0.00507849625959989 0.000668056198550368 3.12510518948371e-20 2.00022238374953e-18 0.000387281283724813 0.00102155569520634 0.000461535774915547 0.00294451072087596 0.000159978320855239 0.00147303958634341 0.00593588969118151 0.00596975575232046 0.00245141811753561 2.69233681797982e-14 0.000240612803776166 0.000824899577441746 0.00540471262187046 0.00638103987176542 0.00414443281398358 0.000225910383925705 0.00015984403642364 0.000126640056549684 XM_005201500.1 OPA1 PREDICTED: Bos taurus optic atrophy 1 (autosomal dominant) (OPA1), 0.0 6437 100.00 0.535253525352535 NM_130834.2 OPA1 Homo sapiens optic atrophy 1 (autosomal dominant) (OPA1), 0.0 5029 90.47 0.551455145514551 TCONS_00004020_5 sp|O60313|OPA1_HUMAN OPA1_HUMAN Dynamin-like 120 kDa protein, mitochondrial; 0.0 1935 95.60 0.998977505112474 1 coding 0 0 0 0 -0.175008053108471 0.598736268235526 -0.268639324881919 0.0318685745742664 CCTCATTTATTTAACTTGAGAGGCACAAGTTCCCAGTTCCACCCCGGAGGCACAAGCTCCCAGTTCCACCCCGGAAACAGAGGGCGGAGAGGGGAGAGGGGAGGGGGAAATAAAGTGGTTCCTACAGAGGCTTTGAGTGCATGAGCGAGTCCTCCGCCGGACCGTTTTTGCTGCCCTCCTGGAAGAGCGGGGTGGAGGTTTGGCCGACGGACCAAGTACGGGTGCTGAGCAGGCTCTTACGGAAGTCCATTCGCCATTGGGAGGGCCGCAGAGGCTGCTCTGTGCCCTTGTTGCTGCGGGCCTCTTCCTGGGTCATTCCCGGAGCAGGAGCTGGACTGGGGCTGACACCCGGGCTCCCCGCTGGCCGCCTCGGCGCCTGTGTGACCTCCTTGCCGGCGGAATGTGGCGAGTACGCCAGGCTGCCGTGGCCTGTGAGGTCTGCCAGTCCTTAGTGAAACACAGCTCTGGAACAAAAGGAAGTTTACCACTACAAAAACTACATCTGGTTTCACGAAGTATTTATCATACACATCATCCTACCTTAAAGCTTCAGAGACCTCAATTGAGGATGTCATTGCAGCAGTTCTCCTCTCTAACTAGCCTTCCTTTACGTAAACTGAAACTTTCTCCAGTTAAATATGGCTACCAGCCCCACAGGAATTTTTGGCCAGCCAGATTAGCAGCAAGACTCTTGAAACTCCGGTATCTCATACTCGGATCTGCTGTCGGGGGTGGCTATACAGCCAAAAAGACTTTTGATCAGTGGAAAGACATGATACCTGACCTTAGTGATTATAAATGGATTGTGCCTGACATTGTGTGGGAGATTGATGAGTATATCGATTTGGAGAAAATTAGAAAAGCCCTTCCTAATTCAGAGGACCTTGCAAAATTGGCACCTGACTTTGACAAGATTGCTGAAAGCCTCAGCTTACTAAAGGACTTTTTCACCACAGGTCACAAATTGGTTAGTGAAGTCATAGAAGCTTCTGACCTACTTCTCTTGTTAGGTTCACCTGGAGAAACGGCCTTTAGAGCGACAGATCCCGGATCTGAAAGTGACAAGCGTTATAGAAAGGTGTCAGACAAAGAGAAAATTGACCAACTTCAAGAAGAGCTTCTGCATACTCAGTTAAAGTACCAGAGAATCTTGGAACGGCTAGAAAAGGAGAACAAAGAATTGAGAAAATTAGTATTACAGAAAGATGACAAAGGCATCCATCATAGAAAGCTTAAGAAATCTTTGATTGATATGTATTCTGAAGTTCTTGATGTTCTGTCTGATTATGATGCCAGTTATAATACACAAGATCATCTGCCGAGGGTTGTTGTGGTTGGAGATCAAAGTGCTGGAAAAACAAGTGTATTGGAAATGATTGCTCAGGCACGAATATTTCCTAGAGGGTCTGGGGAGATGATGACACGTTCTCCAGTTAAGGTGACTCTCAGTGAAGGCCCTCATCACGTGGCCTTATTTAAAGATAGTTCTCGGGAGTTTGATCTTACTAAAGAGGAAGATCTTGCCGCATTAAGACATGAAATAGAACTCCGAATGCGGAAAAATGTGAAAGAAGGCTGTACTGTTAGCCCTGAGACCATATCCTTAAATGTAAAAGGTCCTGGACTACAGAGGATGGTGCTTGTTGACCTACCAGGTGTGATTAATACTGTGACATCAGGGATGGCTCCTGACACAAAGGAAACTATTTTCAGTATCAGCAAAGCTTACATGCAGAACCCTAATGCCATCATACTATGTATTCAAGATGGATCTGTGGATGCTGAACGCAGCATTGTTACAGACTTGGTCAGTCAAATGGATCCTCATGGAAGAAGGACAATATTTGTTTTGACCAAAGTAGACCTGGCAGAGAAAAATGTGACTAGTCCAAGCAGGATTCAGCAGATAATTGAAGGAAAACTCTTCCCAATGAAAGCTCTAGGTTATTTTGCTGTTGTAACAGGAAAAGGAAACAGCTCTGAAAGCATTGAAGCTATAAGAGACTATGAAGAAGAATTTTTTCAGAATTCAAAACTCCTAAAGACAAGCATGCTAAAGGCACACCAGGTGACTACAAGAAATCTAAGCCTTGCTGTATCAGACTGCTTTTGGAAAATGGTACGAGAGTCAGTTGAACAACAGGCTGATAGTTTCAAAGCAACACGTTTTAACCTTGAAACTGAGTGGAAGAATAACTATCCTCGCCTGCGAGAACTTGACCGGAATGAACTATTTGAAAAAGCTAAAAATGAAATCCTCGATGAAGTTATCAGTCTGAGCCAGGTTACCCCAAAACATTGGGAAGAAATCCTTCAGCAGTCTTTGTGGGAAAGAGTATCAACTCATGTGATTGAAAACATCTATCTTCCAGCTGCACAGACCATGAACTCTGGGACTTTTAATACGACAGTGGATATCAAGCTTAAACAGTGGACTGATAAGCAGCTTCCTAATAAAGCAGTCGAGGTAGCTTGGGAGACCCTACAAGAAGAATTTTCCCGCTTCATGACAGAACCAAAAGGAAAAGAACATGATGACATATTTGATAAACTCAAAGAGGCTGTTAAGGAAGAAAGTATTAAACGTCACAAGTGGAATGATTTTGCAGAGGACAGCTTGAGGGTTATTCAACACAATGCTTTAGAAGATCGATCCATATCTGATAAACAGCAATGGGATGCAGCTATTTATTTTATGGAAGAGGCTCTTCAGGCTCGTCTCAAGGATACTGAAAATGCAATTGAAAATATGGTAGGTCCAGATTGGAAAAAGAGGTGGTTATACTGGAAGAATCGAACTCAAGAACAGTGTGTTCACAATGAAACCAAGAATGAACTGGAGAAGATGCTGAAGTGTAATGAGGAGCACCCAGCTTACCTTGCGAGTGATGAGATAACGACAGTCCGAAAGAACCTTGAATCACGAGGAGTAGAAGTAGACCCGAGCTTGATTAAGGATACTTGGCACCAAGTTTATAGAAGACATTTCTTAAAAACAGCTCTAAACCATTGTAACCTTTGTCGAAGAGGCTTCTATTATTACCAGAGGCATTTTGTTGATTCTGAGTTGGAATGCAATGATGTTGTCCTGTTTTGGCGAATACAGCGTATGCTTGCTATCACCGCAAATACTTTAAGACAGCAACTTACAAACACTGAAGTCAGGCGATTAGAGAAAAATGTTAAAGAGGTATTGGAAGATTTTGCTGAAGACAGTGAGAAGAAGGTAAAATTGCTTACTGGCAAACGAGTTCAACTGGCCGAAGACCTCAAAAAAGTTAGAGAAATCCAAGAAAAACTTGATGCATTTATTGAAGCTCTTCATCAGGAGAAATAAATTATAAAATCCTACTCATCATATAATCACCTCAGCATACATCTGAAGAAAGAAAACTCAAAAGTCTTTTGTCTTGCCTTTTTTTTCCTTCTGCTATTCTGCCTTTCTAAACATAAAATAAAGTCATGGAATAAAAATAATTTATGTGTGTTAGAGGCACTTTAACAGTCAGCTGCCTTTTGAATGGAAGAACAGTGGAAATGCCATTAACATTCTGTTTTATTGTATTTAAGTGACAAGTTGGGATAATTTAAGTGGTGTGGCCATTAGGCTGTCCTTGAAGATGAGAAACTTGCACTCCTGCTTGTCATCTCGTTTCTAGTGGCACGGGTTCAGCTAACTCTTTAGCCGTCGTTACTCAGTGTCATTTCTTTTGCAGAGAAAGAATGTTAGGTGTTTTGAAATAAAACTTACGGCAATTTTCTAAAGGCTATCAATTGTATATAAAATGATGGTAACCTGCTGAGTTGTTGTCTGTATCTGCAGTGTTCTGTGTACAGAAGCTATTCTTTATTGTGATCTCTATCAAGATCTGACACAATATGCAAGGTTAAAGGATACCACAAAATGTTTCAGAAATTGAAAATTCAGGAATTATTTTTTGTATACTGTTTGATAGGATGTAGATGCAGTTTTAAGCAGAGAGTAGCAATGTATTTTACTTGGGAGCTGAGTCATCGAGAACATTTCTGTGTCCTTCAGACCTAGGGACAGTGAGTGAGTGGGTGGGCGAATGGAGAGGGAACAGAGGGCCCTGATGTTCTGTACAGAGGTTAAGAAGTGACCGTACTGGTTAACTCCCTCCAACTAGTGCTGGCCAGTGGGTATATACCCTCACTGAAGCAGACATCATTCAGTTAGTAATTAATATTTTTGCAGTTGTAAAACACAGCAACTTTACAACTACAAATGTATTGCTAAAAAAAAAAAAAAGGAAAAGGACCGTGTTTATTTCTGTGAGCTATGGATAGGGAAAAATGCACTCAGCTGTGTTTCTATAGATTTCCCCCAAGCAAAAGGCTGATGTTAAGTCAGTGCTTTTATCGCATCTTTCTATAAATTTAAGAAGGGGTGGTTAAAGGAGATGTCTCCATTTCTTTGAGATCAGTATTTGTGATTTAAATATATAAATAATAAAATGTTATTAAAAATCCCATTTTAGAGTCCAGACATTTCCCTGTCCTACTCAGTAATATGACTTCTTTCATGGATTGTATATTGTTTTCCTTTATGGCTGATCTCACACTAAGCATGCTTCCCTCCCCACCCAAAAGCTATTTCTTAAAATCGGATGTTTTAAAAGAAAAAAAAAAACCCTCAGATTCTCAACAGTAAACAGTAAACTGTTGTGTCAGTAGTTCAGAAATCACAAATGATTCAAATGTAAACAAATCACTATGCAAAAGTATAAAAATGTAACAAATAGAAACAAATTCTATGTACAGAAGTTAAATTCTAATGAGACCAGGAATCATTTTGTTTTTCACCACAGAATTTGCAAGGAATAGAATGAACAAAGCTCTGTACTGAAGACTGAACAACTGTAAATAGATTTAAAAGGTACTCGATCCAGGTATCAATTTAAGAAATGAAGCTATGTAGGCAGTGAATGATGGGAAACGAGCGGTTCCTGCAGCTTCACGGTTGAACCATAGTTCAGCTGAGCTGTGGTTACAAGTGGAGCAGTCAGCCTTTCTTAGCTGCTTAATTATGTCCTCTTTTCTCTGTATTATCCCCTTTCCAGGCTTGACTCTGGCACACTCCTTCCCACAAATTATTTAGCCTCCAGATACAAATGAATAGTGTAATAATGAATAGGGATCATTGCAGAGAGTGGTATTTCCTGACCTTATAATTTGGGAATTTTGCATATGATATTAAGATTCAGAGTGTAGGTTTAAAAGGTAAATCCCTTAGTCAATAATTTTATTTTTATTTATTTTAGATGTATTTATGTGCTAAAAGAAATATATTTTAGTTTTCCAATAAAGGGGATCAAAGTTTTGTGTTTTTTTTTTTTTACAGTTTTGATTCTCTAAGCTGGTATATGCTATAGTTTCAGGAACTTCAGCAATATAGAAATGTGCTTATAAATATGCTTACCTTTTGAATAATCATGGCTTTGTGTTTAAATATTTAAAACTTAGCCTTGTTTTTACTTGTGCACTATGAATGAACTTTGTATTATTTTTTAAAACGTTCACACTATATGTAGATGTTACTGCAATTTATATTTTGCCTGTGCTTGATCTAAAATCATTGGTGTAGATGAGTAATTAAAGACACTGAAATCATGTTATTGGAGATCATCTTTTAAGTTGTCTCTGTTATAATGAGGGGGAGAGAGAGAGAAACTTATGCACCCAGGATGATAATTGACTCCACAGTATAACCAAATTCATGGTCTAATAAGCCTCTTAACATGTGGCTCTTCTTGGAATGCTTGACTTTCACATGCCTCACATTGCATAGTTGTAATTCATGATCTAACCATGCTTTTTCATGTCTTGATATTTGTCAATACACTTTGGTATTTTCTTTGGTGAAATATATTTTTTAAATGTTTTTAATTGCATTTTGCTACCATGGCCATCATTTTCATTGATGATGCTAACCTGTTTAGTCATTTATGAGGCTGCCTAAGAAGGCATCATTAAGTCTTAGAACCAGAAGGAACCTTAAAGATCACTGCATTCCATCTACCACCCAATTACGAACTCCCTTTTTTTTTTTTAAATAGAATTTTTCCCAGAACTTTGCTCATGTGTGTGTTTAGTTGCTCAGTTGTGTCCGACTCTTGGCGACCATATGGGCTATAGCCCAGCAGGCTCTTCTGTCCATGGGGGTTCTCCAGGCAAGAATACTAAAGTGAGTTGCCATGCCCTTCTCTAGGGGATCTTCCCAACCCAGGGATCGAACTCAGGTCTCCCGCATTGCAGGCAGATTACCATCTGAGCCACGAGGAAAGCCCAAGAATACTGAAGTGGGTAGCTTATCCCTTTTCCAGGGAAACTTTCCGACTCAGGAATCAAACAGGGGTCTCTTGCCTTGCAGGTGGATTCTTTACCAGCTGACCTTAAGATTTGGTGACCATTAGATACATAAAATAAGACAGTGTGTGGATGTATCTTCTCCCTGATTCACACGGTTAGGTAAAGCCAAAACCAGGAAGAGTCTGTAAAGTCACGATTGCTTCCATAAGCGGCACACAGTCGCTGGAGTGTGGTGTATTTTCTGGTGAATAGATGTTAAGACAGTTTTAAATTCCTTTAGAAAATTTAGAGGGAAGGACATATTTCAATCATATTAACAGTTATTTCACTTATCAG EMBV3_16517 GCTGTTGGATAGCTGGTGGGCTGGTTATATTTCCACCACTTTGCCTGGGCTTAAATCTGG Gene GeneID:787518|LOC787518:XM_002687448:244_cdna Constitutive 0 NULL GeneID:787518 5 GENE LOC787518 NULL similar to olfactory receptor MOR114-1 EMBV3_27221 TCCTTCAAAAGGGGGTTGTGATGAGAGCACCGCAGGACTTTTCTCAAAATGAAAAGGCAG Gene GeneID:510604|PCF11:XM_002699067:88_cdna UTR3_Alt 2 NULL GeneID:510604 29 GENE PCF11 NULL PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) EMBV3_24139 TTGTGGTTAGAACTGACCCTGTCTCCAGAGGCCGCACCAAAGGTCAAGGGTTTGAGGAAA Gene BVV0102_179239 + 0 NULL GK000018.2:28447970-29001518 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150652 TCONS_00150651 TCONS_00150654 TCONS_00150653 TCONS_00089383 TCONS_00150649 TCONS_00150650 TCONS_00150655 2 XLOC_091920 XLOC_054168 NonCoding TCONS_00150650 XLOC_091920 NonCoding NonCoding - 26:25387569-25438015 - TSS112786 1293 3 TCONS_00150650_1 48 0.412219644238206 2 0.974407770839528 0.005233117407391 0.00384734290697955 0.00484541732383514 0.00253874932051537 0.00431835626817257 0.00107063558865859 0.00253477506483841 0.00294834870146972 0.00305259154653152 0.000195076362971965 2.2522176082451e-18 1.88398568959939e-05 0.000475588929679391 0.00157830444264582 0.000114904747242259 0 0 0 0.00202633879227886 0.00194337353259932 0.000760992460960532 0 0 0 0.00192774575825432 0.00199713230875556 0.00179796315144941 2.86731823859494e-06 3.70617352768597e-06 4.59607914218501e-06 0 noncoding 1 0 1 1 -0.43078819713837 0.110705908000018 -0.00656737458713436 0.890721302376369 CCACTGATTAAGCCCATATGTTCGTGCTCAGCAAGTGGCAAGGGATCAAGGAGCTGGGCTCACTTTCAATCCTGAGCTCCAGGAGAAGCAGAGTCCTGACCTCCCTCCCCTAACTCACCACTCCAGGGCTGGGACCAGTAAGCTCTTGGAAGCAGCTCCAGTTCAGGGAGCCTTGTGGTTAGAACTGACCCTGTCTCCAGAGGCCGCACCAAAGGTCAAGGGTTTGAGGAAAGATAGTGCCTTCCAGCCACGTTTTTTTGCTTAAAATGGATCCATCCTCAACAAAATGAGGTACTGGATGAGGTGCTGGTGACGCAGTAATAAGGAAGGTCAGCGTCTCTGGCCTCACAAACATACTGGCTAGTGGAGCAGAAGTCAATGGAAGAGCAAATAAAGGCATTTTACACATTGTGATAAATTCTGGGAGTGCAGCAAGTGGAGATATTATGACACAATATGGCCGTCCCAGTACAGAGCATGGTGAACTGATCAATGTCTCGTTTCCAGAAAATATAATTCTCTGAATGCAGCCTAAAACTGCATTTGTGTTGTTTCTTTTTTTATTAGCCACCTTACACTTTTTATCTGTATTGAGCCAAAATAAAATTTTTATTATACAAAGTATTTTCAGTAAATACTTATTATACAAAGTGACTGCAGCAAATGTGTGAAACAGAAAGAAGAAGGTGACCTGTATTATCACCACTGAGAGTTACTGCTTGCTACCTTTTGGATCTTCTTCCTATTAATAACTATGTTTATGTATGTGTCTTATAATTTTATAAACTGGTTTGATCCACTTACGAAAATGTTACATGTTATTTTCCCCCACGTCAGGAAGTATCCTATATTATCATCCATCGTGGTGACATGATATTGCACTGTGTGGTCAAGCGAAACACCTCATCACTTTTGGATGCGAAGCAGTTAAACCAGGTCTTCCTCCTTCTGTACTTGTGTAATTTTTTTTTTCTAACCTAAATGTAGGACTTTACATTTTTATTAAAAAATCGTATTGTTGCTTTTGAGATAAATTATTAGTCTGTTATGATCTTTTAAGTCATGATTTCATTAACCAATCTCTCCCAGGTTGATACGATTTTAAAATCAGTAAGGATCAAAATCACTGATACATCATTTTAAGTAGGATAGAGCCTCATAGCATTCCCTTGGAAACCCCCCTACAGTTACTCCATTGATCAAACACTGTTTAGTTCTGATCAATTAATAATTTTAGCTGTACTATCCTGTGGCTTGTTTCTCCATTGGAAAATAAGAACTTTCAAAAACAAG TCONS_00150648 s 3' 26933 TCONS_00150648 s 3' 26933 EMBV3_05543 TCCTGCAAAGAAAATGAAGGAACACCCAAGTGCAACGTGCCAAAGAGACAGGAAGAGCGC Gene GeneID:100139177|LOC100139177:XM_002699836:17_cdna Constitutive 0 NULL GeneID:100139177 X GENE LOC100139177 NULL similar to transcription elongation factor A (SII)-like 7 EMBV3_03055 TGCGGCTTTGAACTAGGACTGGAGTTCCGGTTGCCTCCCTCTGAAAGGTGTAGCAGTTAT Gene GeneID:515665|TMEM9B:NM_001034507:122_cdna UTR3_Alt 2 NULL GeneID:515665 15 GENE TMEM9B MGC127949 TMEM9 domain family, member B EMBV3_07739 GAAGTGCCGACTTTGATGGCATTAGCTGGAAGCCTTTGTCATATTTGGCGTTTCCCCACC Gene GeneID:505213|HSDL1:NM_001098871:11_cdna UTR3_Alt 3 NULL GeneID:505213 18 GENE HSDL1 MGC152451 hydroxysteroid dehydrogenase like 1 EMBV3_37014 GTGGGAAAGTTGCAGACTGTTTTACCAGGACACATTATTGCCATAAACTGGAGACCAGAG Gene BVV0102_033530 + 1 EMBV3_02793 GK000006.2:32005925-32136523 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11069 AAGATGGACAACATCAGCCGAGCCGTGGGGGGGAGCACACACAGTCTTCAGTTAAGAAAT Variant GeneID:518522|OSTM1:NM_001075776:29_cdna 510^722 3 EMBV3_13696 GeneID:518522 9 GENE OSTM1 NULL osteopetrosis associated transmembrane protein 1 EMBV3_38686 GGCGAGTGTGGACACCTGTGCAGTTTATTAACATCAACTATATCCCTGTGCAGTTCCGGG Gene GeneID:508609|PXMP2:NM_001046008:102_cdna Constitutive 2 NULL GeneID:508609 17 GENE PXMP2 MGC137246 peroxisomal membrane protein 2, 22kDa EMBV3_01974 ATAAATAAGAGCTGCACCTGCACCGCCCCCACCCACGTACTTACTTGTTTATATCACTGT Gene BVT0102_003137 + 1 EMBV3_13513 GK000010.2:82532248-82559533 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05163 GGGCCGCAGGCAGTTCTGCAAGAGAAGCTATTCTGATCTTGACTCCAACCGGGAAGATTT Gene GeneID:513279|PPRC1:XM_002698450:451_cdna Constitutive 0 NULL GeneID:513279 26 GENE PPRC1 NULL peroxisome proliferator-activated receptor gamma, coactivator-related 1 EMBV3_18491 GTTTTCAGTCTCCGGCACAGCAAGGAAGAGAGGGAGGACCTGGATGCTGAGGAGCTAGAA Gene GeneID:399680|SLC5A2:NM_203360:236_cdna Constitutive 1 NULL GeneID:399680 25 GENE SLC5A2 NULL solute carrier family 5 (sodium/glucose cotransporter), member 2 EMBV3_20197 CCAGATTACCTCGCAGCCTTTATTCTTATCCATTCCAGGCATTCTGCCAATCTCCCGCTG Gene GeneID:785873|TRIM26:XM_002697339:284_cdna Constitutive 0 NULL GeneID:785873 23 GENE TRIM26 NULL tripartite motif-containing 26 EMBV3_02888 GAGTTTTAGGAAAAAAGAAAACAACTGCAATGACACTTTGGTAACAATTGCTTGTTTTGT Gene GeneID:536269|MTHFD2L:XM_002688352:145_cdna Constitutive 3 NULL GeneID:536269 6 GENE MTHFD2L NULL methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like EMBV3_01104 TGTGCAATTGCAAAGAGTCGGAGATGACTGAAGCGACTTAGCATGCATGCACGAGCACAG Gene BVV0102_365047 + 0 NULL GK000015.2:53115418-53137072 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10452 AATCCAGCCAATGTGACCTTCAGAACCTACGCAGGCATGATGCACAGTTCATGTCAACAG Gene GeneID:539992|LYPLA1:NM_001034688:47_cdna UTR3_Alt 3 NULL GeneID:539992 14 GENE LYPLA1 MGC126967 lysophospholipase I EMBV3_17891 GTGTATGTGTGTGTGTGTTATATGACCTTAAAAATAGCATCATTCCTTTTCTTTGTCTCT Gene GeneID:508151|DSG2:XM_002697712:33_cdna Constitutive 2 NULL GeneID:508151 24 GENE DSG2 NULL desmoglein 2 EMBV3_10075 ACACCCAAAGCATTTCCAACATCACTTTGCTGCCCAGGTATGTATCTCTAGTTGGCCTGC Gene GeneID:512385|LHX8:XM_002686301:181_cdna UTR3_Alt 2 NULL GeneID:512385 3 GENE LHX8 NULL LIM homeobox 8 EMBV3_09526 AGCAGAAGTTTCGAAGTGAGACCATCACAGAGGAGGAGCTGGTGGGGCTCATGAACAAGT Gene GeneID:515946|CBR1:NM_001034513:51_cdna Constitutive 0 NULL GeneID:515946 1 GENE CBR1 9-KPR MGC128388 carbonyl reductase 1 EMBV3_41848 CCCCTGGCTGCGCTCCCGCCAGGGCTCCGCGTAGTATGTGCCATGGCTATGACTAGTGTC Variant GeneID:613695|C9H6ORF203:NM_001102267:62_cdna 155^323 3 EMBV3_11696 GeneID:613695 9 GENE C9H6ORF203 MGC151851 chromosome 6 open reading frame 203 ortholog EMBV3_23668 AGGCAACGTTTAAGGCTTTCGGTGTTGATTGCCAGACAGCGTCTATTCACACCTCACCAG Gene BVT0102_027672 + 1 EMBV3_40468 GK000024.2:22089005-22094897 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06858 CTCAGGACGTGCCATCAGGCTCCAGGGAAGGATGCGGAGAACTCGTTTGGGTAGGAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41895 GCTGTGCCCCAGGCTACCAGTTCCCCCAAGCCTTGTCTTTGGCCATGATGTTCACCTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04719 AGGGCTCAAAACAGTTTCTGTGCATTGTTCTTGGTGTTGGTTTTGTTATTGTTTTTTAGG Gene BVT0102_264684 + 0 NULL GK000016.2:56793091-56941659 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073345 1 XLOC_045110 NonCoding TCONS_00073345 XLOC_045110 NonCoding NonCoding - 16:56802221-56802899 - TSS55189 678 1 TCONS_00073345_1 35 1 0 0 0 0 0 0 0 0 8.72377771923999e-06 0.00043058278832776 0 0 5.27388961708384e-06 0 0 0 0 0 0.000407079561894548 0 0 0 0 0.000419462060600432 0.00106324358923786 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.114451480116293 0.495870273287483 0.0277475119932755 0.704037852088879 ACAGGGCTAATTTAGGTGGCTTATTTTCCCAGAGTTCAGAGGGACAAAAGCAAACACTTCTATTTCCAATGTAAAGCCAAATTTAGCAGAAGAAATAGTAAGGAAGGATAAAGCCATTCACAGAGAAGCTGCTTGATCAAGCTGAAACACTGCAAGTGAAGGACAGCTACTAACTTTGGGTATAAAGTCTGAAGCTTCAGATTCCTATTCTATATAGCAAAGTTCTACACTGTGTGTAAAACATGCTCCACAAGAGGTCATTAGAGTTATTACAGAGGTGGTGAAATAAAAAGGCCAAAGTCAAAAGCATCATCTTAAAGGAGCTGTGAGGCAGTAGGCAGGGAAACTTATCTGTCATAGCAAAACATCAAAGAGTTTTTTTTTTAGTTTGCATTAATAGTCTGCTGAAGATTACATATGCTGTATGCACATATGTCCTCACCATTTAATGGTGGCCCAAAAATCAAAGAATGAGAATAACAAAGTCAGATATATGTTGTTAACTGCTTTCAAATTAATTGTAGATGTCTGAAACTTGTTTTCTTTGTGAAAACTGATGTCTTATGAATAATAACACTTCCTAAAAAACAATAACAAAACCAACACCAAGAACAATGCACAGAAACTGTTTTGAGCCCTTTCTGTATATTAATTCATTTTACTTTAAAAATTAAATAT TCONS_00067711 TCONS_00067712 TCONS_00067713 TCONS_00067714 TCONS_00067715 . 3' 9132 TCONS_00067711 TCONS_00067712 TCONS_00067713 TCONS_00067714 TCONS_00067715 . 3' 9809 EMBV3_32613 GCGATGGAGCTGCCAGCCGTGAACCTGAAGTTTCTGGGTGGCTTGGTGGCTACCATCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21865 GCTAAGCGCCACCGTAAGGTTCTGCGCGACAACATCCAGGGCATCACTAAACCTGCTATC Gene GeneID:525863|LOC525863:XM_002693197:374_cdna Constitutive 0 NULL GeneID:525863 15 GENE LOC525863 NULL similar to Hist1h4c protein EMBV3_09338 TGTCTTGTGGCTGTTGCTCTTGCCAGGCCTCCTTTTCCAGAAGTGTTTGGAAAGGAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39392 GAAAACAGACCCTTGTGTCTGGTGAGAAAAAGAAAACCAATTTGGGAAGAGAGGACCATG Gene GeneID:327684|NR2F1:NM_175804:2_cdna Constitutive 0 NULL GeneID:327684 7 GENE NR2F1 COUP-TF COUP-TFI nuclear receptor subfamily 2, group F, member 1 EMBV3_20566 ATAACTGAACGCGAGGCAGAGCCATACTATGCATTATCCAATTGGTTTGCTATTTGATCT Variant GeneID:532686|ATG5:NM_001034579:21_cdna 211^338 1 EMBV3_21168 GeneID:532686 9 GENE ATG5 MGC127005 ATG5 autophagy related 5 homolog (S. cerevisiae) EMBV3_35299 CCACTGCTTTCCCTTGCGTGTGCAGACACCTGGATCAATAAGTTGGTGCTTTTCACCTTG Gene GeneID:782577|LOC782577:XM_002693704:386_cdna Constitutive 0 NULL GeneID:782577 15 GENE LOC782577 NULL similar to olfactory receptor Olr446 EMBV3_19238 CAGATGGCCACAGGAGGGGCTGTGACTTAGCACTTGCAAGTTTTTGCTGTTGAACTGTGA Gene GeneID:514869|TEX261:NM_001035300:17_cdna Constitutive 0 NULL GeneID:514869 11 GENE TEX261 NULL testis expressed 261 EMBV3_14363 TGAATTCCGAAGGCAAACTTGAACAGACAGTCTCCATGGCAACCACTACGCAGCCCTTGA Gene GeneID:507503|THAP4:NM_001038669:20_cdna Constitutive 0 NULL GeneID:507503 3 GENE THAP4 MGC134442 THAP domain containing 4 EMBV3_40658 GGCTGGTTTGTGCTGGCTTTACCAGAGCTAAGAGAGTTTGAAAATGCTGAGACGAGAACA Gene GeneID:537282|MYO1B:NM_001102199:11_cdna UTR3_Alt 2 NULL GeneID:537282 2 GENE MYO1B MGC160128 myosin IB EMBV3_38242 TGGGAACCACCGCTTTAGGTCCACAGTCTCCTCCCTAGAAGCCTCAGGAAACAGTAAGTA Gene BVT0101_049140 + 0 NULL GK000011.2:83659067-84075709 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025765 1 XLOC_014821 NonCoding TCONS_00025765 XLOC_014821 NonCoding NonCoding - 11:83700896-83704816 - TSS18613 674 2 0.82852768563409 8.16766115644857e-05 0 1.38459177277699e-05 0 0 0 5.38895163573744e-05 0 3.54652981214754e-05 0 0 0 0 0 0 0 0 0 0.000153475188168684 3.3244526575688e-05 4.64311899732598e-06 0 0 0 0 5.43002918682256e-05 0.000171429499911602 0 0.00010576091992265 0 0 noncoding 0 0 0 0 -0.136702089427056 0.4129190627935 0.000177468275454951 0.997185152823053 ATGCTGCGCCGCCAAGTCTCAGGCTGGGAACCACCGCTTTAGGTCCACAGTCTCCTCCCTAGAAGCCTCAGGAAACAGTGATATTTGGATGATATACTGCGGAATGAGAAAAGGGGAAGAAATGATGGCCTAGGATGCTACCTGTGATGCTAATTTAACTAATGTCCTGACTCTTCCCGAGGACCTCTGGGGACAAGAGCTGCACTGCCCACATTGTAGGAGTGGCCCTTGTCGGCCTGGGCTCAAAGTCAGAATCCAGACCCTGCAATGAACTGATGATCGATCACAGCCTTCCTGGCTGCCAGGGTCTTGGCCTTTAGACCCAATGGGTTAAGAGGCAACAAAAATTAGGGAGAAGAGGAAGACACAGTCAACCTTTTATTCCAGTGTCAAGAAAGACTCTGTTCTTTTCCCCAGGAGGGGGACTATTGCAGTGAGCCACTTCAGATTTTCTCTCTAGCAGTTTTCTTGAGTTTCTACGCATCTGATTCCTGAGAGTCATTCTCTCTCTCTGCTTGCCTCAAGGCTCCATAATTCCTTTCTGCTTCCTGTATCAATGTGATAAGACTCCACTGACCTTTTGTCCCAGTACAGCTTCTTAGCTTGTGACCAGATGAAAGAATCTGATAAAGCCTTCCCGTAGGTCCCATTAGCATGAAGAGGGATGGGGTGAG TCONS_00028629 r 5' 41831 TCONS_00028629 r 5' 41831 EMBV3_24889 TGCTGGTGATGTGAGAATGGTTAGCACAAGTCCTGCTCTTCAAATGTGAGTGTGCCTGTC Gene BVT0102_152933 + 1 EMBV3_12275 GK000002.2:52897806-53065402 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11758 AACAGGTGCTGGAGCCAAACTTCCTGGGTTCATATCCTAGCTCTGCCACTTACCAGCTGT Gene BVV0101_023488 - 1 EMBV3_35000 GK000030.2:92320416-92323925 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30826 GGAAATTAACTCTTGCTACCCCTTCCCCCCACCCCTGCAATCTAAGCCTCATTCTGCTGT Gene GeneID:506705|PRR13:NM_001038047:24_cdna Constitutive 1 NULL GeneID:506705 5 GENE PRR13 MGC133876 proline rich 13 EMBV3_21584 GTCTTCCTGGGAACTCTGAGAAGGCAGAAAAGAAGGGAGTGTATCGCATTTTCATCCCAG Gene BVV0102_234405 + 0 NULL GK000025.2:37559079-37564389 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04772 TCGTGTTTACAACTTTTGTGCCCAGGACGTGCCGTCGGCCCAGCAGTGGGTGGACCAGAT Gene GeneID:510349|SBF1:XM_002687985:80_cdna Constitutive 0 NULL GeneID:510349 5 GENE SBF1 NULL SET binding factor 1 EMBV3_12252 AACTTACCAAATAAGCATAAGGATTTGAAGGCTACAGGAGTCCTGAAGGTTGATGGAGGG Variant GeneID:540355|HS3ST5:NM_001076215:7_cdna 302^414 1 EMBV3_21160 GeneID:540355 9 GENE HS3ST5 HS3ST6 MGC139532 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 EMBV3_23713 CCGACAGCTCTCCGGGAATCACAAGTAGCAGAAGAGGAGGAGTGGCTACATAAACAAGCA Gene GeneID:527393|DYX1C1:XM_002690895:39_cdna Constitutive 0 NULL GeneID:527393 10 GENE DYX1C1 NULL dyslexia susceptibility 1 candidate 1 EMBV3_29083 TTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTT Gene BVT0101_010057 + 0 NULL GK000008.2:33415849-34061870 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080713 TCONS_00071095 TCONS_00232830 TCONS_00118040 TCONS_00078426 TCONS_00210913 TCONS_00205125 TCONS_00180327 TCONS_00166911 TCONS_00118487 TCONS_00160961 TCONS_00056149 TCONS_00125692 TCONS_00197394 TCONS_00250203 TCONS_00001867 TCONS_00087729 TCONS_00137167 TCONS_00031759 TCONS_00001866 TCONS_00148958 TCONS_00110426 TCONS_00103962 TCONS_00132066 TCONS_00001865 23 XLOC_049597 XLOC_042868 XLOC_142312 XLOC_072206 XLOC_047314 XLOC_129423 XLOC_124587 XLOC_110095 XLOC_101747 XLOC_072644 XLOC_097854 XLOC_033952 XLOC_077234 XLOC_119055 XLOC_153146 XLOC_000454 XLOC_052579 XLOC_083377 XLOC_018004 XLOC_090836 XLOC_066330 XLOC_062257 XLOC_080699 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_27255 ACCTTCTTACTACTAGCTGGTGTTAGCTATAACAGAACTCCAGTGAGGCCAAGCAATCCC Gene BVT0102_056874 + 0 NULL GK000007.2:49206632-49250187 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213358 TCONS_00213350 TCONS_00213356 TCONS_00213354 TCONS_00213357 TCONS_00213349 TCONS_00213355 1 XLOC_130433 Coding TCONS_00213356 XLOC_130433 Coding Coding SMAD5 7:49155482-49217780 = TSS159849 6869 1 TCONS_00213356_4 465 0.0273693405153589 7 0.889850233558598 0.00189637234960198 0.00160023094723981 0.0016502693750289 0.000911374474409709 0.00156924593040233 0.000260733059396781 0.000992753669527324 0.00207931546439493 0.00271526446923057 0.00024145448453334 9.91837199067144e-05 4.64436116419081e-05 8.19726320184843e-05 0.00018109289530809 0.000464018898003642 0.000892184903784799 1.97868204020627e-08 0.000393604241862726 0.000273967877284821 0.00104319108808597 0.000752461425546385 0.000234831968948197 0.000438289553791297 0.000305605558477409 0.00185466838523663 0.00163088610147776 0.00187728887774796 1.14398419956052e-08 4.85246144470365e-05 0.000211741855387058 NM_001077107.2 SMAD5 Bos taurus SMAD family member 5 (SMAD5), mRNA. 0.0 1.238e+04 99.99 0.999854418401514 NM_001001420.1 SMAD5 Homo sapiens SMAD family member 5 (SMAD5), transcript variant 3, 0.0 3802 88.49 0.429465715533557 TCONS_00213356_4 sp|Q99717|SMAD5_HUMAN SMAD5_HUMAN Mothers against decapentaplegic homolog 5; 0.0 967 100.00 0.997849462365591 3 coding 0 0 0 0 0.955611536964223 0.0345078420170325 -0.0299754363985738 0.630172266874414 ATCCGGGTCCTGGACGAGCGGGCGCCGTGCGCGTGTCCCGCTGCCGAGCTGCTAATAAAGTTGCGCTGAGGAGAAGCGCAGCGACGGCGCCGGGAGAGCGCGCGCCGCCGGCTCGGCTTGAACCAATGAAAGAAGCTTCTGGCACTTATGAAGATAAAGGTCACTCCTTCCTTTTAAATTGCAGCTTTTGCTTAGGGCCTGTATATGACTTTTCACCTGTCATCTGTATGTTCAGTAGACACTGACTTTGAGTTGCAGAAAGGTTTCTGAAGATTTAAATCAAATGACGTCAATGGCCAGCTTGTTTTCTTTTACTAGTCCAGCAGTAAAACGATTGTTGGGCTGGAAGCAAGGTGATGAAGAGGAGAAATGGGCAGAAAAGGCAGTTGATGCTTTGGTGAAAAAACTAAAAAAGAAAAAAGGTGCCATGGAGGAACTGGAGAAAGCCTTGAGCAGTCCAGGACAGCCCAGCAAATGTGTCACTATCCCCAGATCTTTAGATGGACGCCTGCAGGTTTCTCACAGAAAAGGCTTACCCCACGTTATATACTGTCGTGTTTGGCGCTGGCCTGATCTGCAGAGTCATCATGAGCTAAAGCCATTGGATATTTGTGAATTTCCTTTTGGATCTAAGCAAAAAGAAGTTTGTATCAACCCATACCACTATAAGAGAGTGGAGAGTCCAGTCTTACCTCCAGTATTAGTGCCTCGTCATAATGAATTCAATCCACAACACAGCCTTCTGGTTCAGTTTAGAAACTTAAGCCACAATGAACCGCACATGCCACAAAATGCAACGTTTCCTGATTCTTTCCATCAGCCCAACAACACTCCTTTTCCCTTATCTCCAAATAGTCCCTACCCGCCTTCCCCTGCTAGCAGCACATATCCCAACTCCCCAGCAAGTTCTGGACCAGGAAGTCCATTTCAGCTCCCAGCTGATACTCCTCCTCCTGCCTATATGCCACCAGATGATCAGATGGGTCAAGATAATTCCCAGCCCATGGATACAAGCAATAATATGATTCCTCAGATTATGCCAAGTATATCCAGCAGAGATGTTCAGCCTGTCGCCTATGAAGAGCCCAAACATTGGTGTTCAATTGTCTATTATGAATTAAACAATCGTGTTGGGGAAGCTTTTCATGCATCTTCTACTAGTGTGTTAGTAGATGGATTCACAGACCCTTCGAATAACAAAAGTAGATTCTGCTTGGGATTGTTGTCAAATGTTAATCGTAATTCAACAATTGAAAACACTAGGCGACATATTGGAAAAGGTGTTCATCTGTACTATGTTGGTGGAGAGGTATATGCAGAGTGCCTCAGTGACAGCAGCATATTTGTTCAGAGTAGGAACTGCAACTTTCATCATGGCTTTCATCCTACCACTGTCTGTAAGATTCCCAGCAGCTGCAGCCTCAAAATTTTTAACAATCAGGAATTTGCTCAGCTTCTGGCTCAGTCTGTCAACCATGGATTTGAGGCAGTATATGAGCTCACCAAAATGTGTACCATTCGAATGAGTTTTGTCAAGGGCTGGGGAGCAGAGTATCACCGGCAAGATGTTACCAGCACCCCGTGTTGGATTGAGATTCATCTTCATGGGCCTCTTCAGTGGCTAGATAAAGTCCTCACTCAGATGGGCTCCCCGCTAAACCCCATTTCTTCTGTTTCATAGTGCAGAAGTGTCCTTTCTCAGTTACATTATTAGTGGACTTGTTTTAATTTTAGGGAAACTTCCAGTACAGATACTGTGAGCTTACATGGAAAACAGATTTTACAGCCTGTTTTTTTTCTACGTAATTGTGACCAATACATTTGTTTTTGTGATGAATCAACATTTGTTTGTATTCATGTTCATGTGATTAACTCTCAAAAGTGTTGTGAAAGATGCAGAGCAAGTCTTGTGCCCTGGTTCAAAAGTTTGGCATTGATCTTAAACTGGAACATACTTTTGCCTTATTGTCCCAACAGTTTTTTATTTGTGAAATTTTTTTTGGAAAAGTAATGCATCACATGGTAAAGAATTTTAGCAGTATAAGAGGGTGTTCATTGAAAGTCTTCCGTTCTAGTCTTGATTCTGCAGAACTGTGCTTTTACCAGTTTCTTAGTCCCACCAACTTTAAAAAAGTATATATCATTGTTTTATAAAAGCATATGGTAGGGACTTAAAAGAAACTATAAAAAAAATCTTTTATTTGATGGAACACTATGCACTGCTCTAACAAGTAGTGTTCAATAAAAGCCAAGTGATAATTTTCTAAGTGACATCATAAAATTTACATTTAATACAGCTAAATGTCGTCAGTGTGTTGTGACTCCACTCAGTATATCTTTTGTAAAACTTCTCCTTTTATAAAAAAAGTTTCTGCGAACAGCAGATCTCCATTATATGTCTTTTACTCACATCTGTCACGAGTACTACTTAATGGCTAGTGACAGTGCGTGCATGGCCGTGCTCAGCTATGTTTGCTGCTTTTGGCCAATATTGCAAGAACTCTAATTTTGACATGCATTAATCTTTTATTTTGCACTTTGATGGGTGACAGTTTTTAGTGTAACCTTCGTGAAACACACTCTAGTGACTTGGACTTAAGTGCTCATCCTTGCTTCCTTGGTACCCCTTTTGTATTAAACACTGCAATTTATAGATTACAGTTATAGAAAGTTATACTTTTTCTAGCTTTTGTTGTATTTTCAGCCTAGATTATTAGACTGTTATCCTGTAGCTCCAATTTAAGGTTTCTTTTTAATTCCTTGCAGTTTTACGGATGATATTAATGTTGGAAAATCTACTTAATCCCATTGCTGTTAACTTACATCAGTCTCCCATGCAGGGACCTGTGTCTTATAGCCATAGGAGCCTCTTCAGCCTGGCCCCAATGATGAGGCCACCTATCTGATGTATGAATCAGCAGTGGTTGTTGAGCTAGCTGGTTTGAAAACATTCACATATCAAAGAATACAGACTGTTCTCTCAGTTACCATGCATGCTCTTCCATTTTTTTAAGCACCTATGTGGATGCTAGTCTCAACAATCCTTAGGAAAGACACAAAAACTCTAAAATATTCTTTTAATCAGTCATATGTAAGGGCTTTGAGTGAAGGACGCATAACCTCTTTTCCTAAGAAACAGTACAGTGGACACTTAGTTATGGCATGAAGAACAAAGATGTTACTTTGGAGGGGGGAAATCACCTAATTTACCTATTAGAAGAAGCTTATTTTTCAGTGTCTTTTGAAAATATGTGGAGCCATGTCAATCTTCTTTTTAAAATGTTAGTTTTGTTAGACTTTCTTCTTTGCCCTTTCTGCTTTTATGTGGGGAAAAAATGCATTTTTGAGGAAAGGAGAATGCAGTTTTTTGTTTTCTGTAACATTATTTACTGCTTTTATAAAGTGCAGCCAATGGATGGCTTTAGTTTTCTCAGATGCAGTGCCATTCATGTTTCAGCTCTCAGTCCTTTGCTAAGTGAAAATCTCTGATAGTAACCTGAGCCTTAAACATCAGTTTTATACGACATGCATTCTCAGTCTTCCGGAATTGTGTCAGCCACACAAAAGAGGATTATTTGCTTAGTGATAGAACTTAGCTATTTACATCATTGTACACTTAGCCGGTTCATGGCACAATCTTTGAAACACATTTGTAGAAAAATCACCTAGGGTGACTGGCATATGCATGTAATCAATAATCAACATCAGTGGGCCTGAACTGATGGAAACTATTGTTTTTATTGATGCTTTCAACTGAGTTAATTAAAAATTGTTTTTATTCATGTAGCAACCTTTAGAGTTAGCAAGATTTTATGTGATTGGCTTTTTCTGTGTTTTCTCTAAAGAGTTGTGTTTCATGAATGACAGTACTGAAGCTATTAACTGGTAAGAGTTTCATGGAAAAGTATAAGCCTATTGTATTTCCTAAAAGCTGTTAACTCCACACCCCTGGGTTTTACATGAAAACTTCATTCAATCCAGCAGATCCTGTAATTCTTGACGATGCTCAGTACAGGACTGGATGGGAAATAAAAATTAGCCAGTAAGATTAAAAAAACTAAAATTTTACCAATGAGAAAAGTACCTCTGAAAGAAACCATTTCATAAAATTACAGTTCTAAGTTTTTATTTAATCTCCAGAATGGTTTATAGTCAAATTTATGAAAGCATCATCACACCCAAAATGATCTTGTTTTATAGCATTACAGCATATAAATATACGCCAACTGAAAAGACAGAGCCTGGGAATAATAAAACTACATCCAGTTTGGTAAATGAGAAAAAGAAGAATAGAATCAAAATTAATCTCAGTTATGTATTAAAGTAAGATTTCCCTGGTGGCTCAGACGGTAAATCGTCTATCTACAATGCGGGAGACCCGGTTCGATCCCTGGGTTGGGGAGATCCCCTGGAGAAGGAAATGGCAATCCACTCCAGTACTATTGCCTGGAAAATCCCATGGACACAGGAGCCTGGTAGGTAGATACAAAGAGTCGGACACAACTGAGCGAAGGCAATCAATCAATCAGTCAATGTATTAAAGCAACAAAAATATACTGACTGGAAAAAAAAAAAAAACAACAGCAGAATTTAAGAGGTGCATCTCACTATTGTATCTCTACATAATTACCTGGCTTAAGTTACGGAGTATAAACTAGTAGGCATGTTATTGATCTACTGAAGTGAACTTTTTTCCTTTAGAGAAAATTTAAAGAAAACATCGATCTAAATGTCAAATATATACAACAGAATATAAATCATTTTTCCATTCTCTTGTTATATAAGTAAACTATGAGAATAGAATTGGCTGGGTTTCTGAGGTGAAATCCACAATAAGATTACTAGGTAGTTCAGTAAGTTATACCTAACAGTATGAAAAGAGGGTATAGCTATTTTATACTTTTCATAACATTTGAGAGTAAGACATTCTTTTAGGATGGAAAATGATCAGTAAGTATTTAGATCTGAAGTCTGTTGTCAAGATAAGGACTGGGGCTCACATTATGTAACCTTCAGTATTATCTTAGAGTACCCGGAAGAAACAGTTCCCCTGTCATAGTGTTCTTTTAAAGGAGAAAGTTTATGCAAAAATGAAATCATGCCAGTAACAGAGAAACTGTAAATTCAAGTTTGATAGTACCTGTTTAAGTGTTGTACTTCCATTGCAGAGAGCATCTAATATCCCAGTTTAGATCTGTTTCTTTATACTTTTTCTAGTTGCTTGCTTAACGTTACGTTAGGTCATTATAACTCTCCCACTAAAAATATATTAATATCTTTTATATTTTCTGAAGAACGATACATCTTTTATAATTATTAAATTTGTCTTCTAATGATGATTAAAATTTTGGACCTACTAACTTTGAAGAGGCTCAGAGCTTTTCCTTATCTTATTATAATAGATTCTTACTTAAGTCTCTCTGGTAGGAATTATGAATGTGTCCTCATTATACCCATCAACTAGATAAGCAAGAATCTTTTAACATAGTAGATAGCCTGGTGGTTTTAGAAGTCTTTGGTGATTTTTATTGGCGGGAGTTTTCCTAAGTATTGGTTTAGGGACATCTCCTCAGATACTAGCACAGCATTTCTTGGGTGGTAATCACGGGTTTGATGCCTATCTCCCTCAGAGAATAGCGTTTTCCTCACTAACACAGGTGGGACTCTGAGGAGGTTTTCTTCTCATAGAAGATGCATGTGTGGAGAGAATCTGAGGCATGCATTCTGCGTAAATGGTTCTATCTGCTAAACAGAAAGGTGGACCGTTCTTTGCAATTCACTGGATTACAGTTTAGCATGTCCTAATTACAAGAGGTAAGAGTATTTGTCAAGCCTTTGTTATATTGGCTTTTTCATAATAGAAACTTCTCTTTTAAAATGAATTATTATAATTGAAGTGTTACTTTAAAATTGGATGATTTACAGAAACAAATGAGAATTTTTTCAATTTTTCAAATTGAAAAAAAATAAATTTCAAAAATTTATCAATCTTTTTTTTTTTAAATAAGAGCTTATCTGTAATATTTGCTGGTAGCAATTGCTGTAAAACAAGTGATGAGTTGTTTTGTTGAAAAGATCCAGTCTCAGAACGGGATTCTTCTGTTATTTATGACAGAGTGAGAAAGGTTTGTTTAGTTCTCATCCAAATAATTCAGTTCTTAAAATTCTTAAAATTTGAAATTGTTGTAAACCATAGTCCTTTAAGGATTTATTTGAGGATACTGTTTTTTAAAAGTTTGAATTTTTGTGTAGAGGTAGATTTTTTTTTTTTTACCCTATCGATAGATAGTACCTTCTTACTACTAGCTGGTGTTAGCTATAACAGAACTCCAGTGAGGCCAAGCAATCCCAAATAAAGAAGAAATCTTTTATTAGAGTCAGAAATCTTTTATAATAGTCTAATACCATTGGAGATGATGTTGCTTTGATTTATTCATAAAGTATTTTAACTGTAGGGACTCTTGAAGATAATAGTTGGGCGAGTGCTTTGCTTTTCAACGTGGTTGGTTAAAGTTGCATTTTGAAAATCGCTTGCATTAAAATTGAGTAGAATTGTAATCATGAAAACTGGGTATATATGTGTAATCCTACCAGTGTTCTCTTAAAAAGATGCTTCATATGAGGATGATAAAGACCAAACCAATGGCTGCACTATAGGTCTGCTTCTTACTTGTACTTGTTCTCCTTCTGTTTATGTTGTAGAAAATGAAATTCTAGCAACATGCTTCAATTCTGTTATCATTTTGATACTTATAAATATGTATTAGGTTTTACTATATTGTGCTTTTCAAAGCCATAACTCTTTTAAGAACTTTGTTTTTGCATATTGTTTGCTAATACTTTATTTTAATAAATCTCAAAATCTGCTT EMBV3_42883 GGATATCAATACCTTCTCCATGCGTGTCAGTTCATTGGAAACCGGAAGGAGCTTAATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23556 CCTAGGCACAGTGAGGGATATAGAAATGAAAAAAGGCTTGGTGTCTGTGCTCAAGAAACG Gene BVT0102_124952 + 0 NULL GK000025.2:23079153-23090645 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146530 1 XLOC_089127 Coding TCONS_00146530 XLOC_089127 Coding Coding ZKSCAN2 25:23087829-23104117 = TSS109527 6577 1 TCONS_00146530_8 969 0.0466778166337236 7 0.596610793884693 0.00051449469388824 0.000290284087042915 0.000447432492470288 0.000260517442217993 0.000319036069407941 0.000122194703547398 0.000262014818499422 0.000705698217743413 0.00033060030507778 1.15398209359772e-05 0.000364765976980181 8.76613431786825e-06 5.4073322455725e-05 4.57740362181803e-05 0.000184273643986282 0.000128503688646149 4.85345336663647e-11 9.19566792499391e-11 0.000245610756919428 0.000281639357389871 6.90303398592543e-05 9.81597675974767e-05 3.8866703977137e-11 6.42222989662498e-11 0.000290361798455105 0.00025049039089237 0.000428797751685381 7.30209100067199e-05 9.59540208251501e-06 5.48479837971967e-06 NM_001205670.1 ZKSCAN2 Bos taurus zinc finger with KRAB and SCAN domains 2 (ZKSCAN2), 0.0 6783 100.00 0.571689220009123 NM_001012981.4 ZKSCAN2 Homo sapiens zinc finger with KRAB and SCAN domains 2 (ZKSCAN2), 0.0 5185 77.30 0.999847954994678 TCONS_00146530_8 sp|Q63HK3|ZKSC2_HUMAN ZKSC2_HUMAN Zinc finger protein with KRAB and SCAN domains 2; 0.0 1712 85.76 0.998968008255934 6 coding 0 0 0 0 0.0557219097650781 0.642267299827875 -0.0152251226655884 0.815132209052392 ATGGCTGCATCCCTGGACCCTCAGACCGACGCGCCCCTGGAGGTTGAAGGATGCCTCATAATGAAGGTGGAAAAGGAGCCCGAGTGGATATCAGAGCCCACTCTGGAAGGATCGGATAGCTCTGAGTCCGAGACCTTTCGCAGATGCTTCAGACAATTCTGTTATGAGGATGTGACTGGACCCCATGAAGCTTTCAGTAAACTCTGGGAACTTTGCTGCCGGTGGCTGAAGCCAGAAATGCGTTCCAAGGAACAGATCCTGGAGCTGCTGGTGATTGAGCAGTTCCTCACCATTTTACCGGAGAAGATTCAGCTGTGGGCACAGAAACAGTGTCCGGAAAGTGGAGAGGAGGCGGTGGCCCTGGTTATACATTTGGAGAAAGAGACTGGAGGACTAAGACAGCAGGTTAGCAGTCCTGTGCATTCGGAGAAGCAAGCCCCCCTTGGAGCAGCCTGGGAGGTGGCAGACTTTCAGCCACAGCCAGTGGAGCCCCAACCCAGAGTGATGTCTCAAGAGGAAGCTGAAAGCCTCCACTCAGGACGCCAGGAGCAGCCGAACCAAAAGAGAGAGCTTCGACCCTTACCCAAAAATGCTCGGCCTTCTCCCTGGGTTCCTTCTCCTGCTAATGAATGGAACACCATAGATCAGGAAGTAACAGCCACTCCAGTTCCTGTCCGGTCCCAGGGACCAGTGAAAGATGTCCACATGGCAAGAGGTTTTTCCTACAAAAAGAGTGTGCATCAGATTCCTGCTCACAAAGACCTCTACCGGGATATTAGAAAGGAGAGTGTTGGGAACATGGTCTCCCTGGGAAGTACAGTGTCTGCAGCTAACAAGATAGCCCGGCTGGAGCCAAGAAAGGAGCCATGGACCATAAGTCTGCAGTCCTCTAATAAGAGGACTGTCCTGCAAAGCAACTACATCAAGGAAAAGTCAGTTCATGCTATTCAGATCCCTGCAAGGAATGCAGGGAAAACATGGAGAGAACAGCAGCAGTGGGGTCTGGAAGATGAAAAAATAGCAGGCGTGCATTGGAGTTATGAGGAAACTAAGACTTTTCTTGCAATTCTCAAAGAGTCTCGCTTTTATGAAACACTTCAGGCTTGTCCCCGAAACAGCCAGGTATATGGTGCTGTGGCTGAATGGTTACGAGAATGTGGCTTCCTCCGAACACCAGAACAGTGTCGGACCAAGTTCAAAAGTCTGCAGAAGAGTTACCGAAAAGTGAGAAACGGCCATGTGCTAGAACCCTGTGCCTTCTTTGAGGACATGGACGCTTTGTTGAATCCTTCCGCTCATGCTTCATCCATGGATAAGCCAAAGGAGATTCTGTCTCTCCCCAGACTGAAGAGAATTGGCATCAGTGCTAAAGAACAGATCAATTTGGTGGAGGAGGAAGAAGCTGCAGAGGAGTCTGATGGTGATGAAATGGGCATTGAGTTTATCCGGAAGCCTGAGCTTCATGGTGCCCCTGTCATATTTCAAAACCTGAGTGGTGTGCACTGGGGCTACGAGGAAACCAAGACTTTCCTTGACATACTCCATGAGACTCGGTTTTACGAAGCACTGCAAGCCTGTCATCGGAAGAGCAAGTTGTATGGGGCCGTGGCTGAGCAGTTGCGAGAGTGTGGCTTCCTCCGAACTCCGGAACAATGCCGGACCAAGTTCAAAAGCCTTCAGAAGAGCTACCGCAAAGTGAAAAATGGTCACGTGCTAGAGTCCTGCGCATTCTACAAGGAGATGGATGCTCTGATTAACTCTCGGGCATCTGCTGCTCCCACCAGCTCCCCAGAAGAAGCCCCGTCACCCTCAGTTCAAGAAAGAGAGGACATGGAAATTGAACCCCAGGAACCTACAGTCTGGGAACCTGAGGAGGACTCCCAGGAGGTGCTTGTTGAAGACTCTGGCAGTGAGAGAATGAGTGAGGAGGAAATCATGCAAGAACCAGAATTCCAGGGACCTCCATGTTTACTGCAAAGCCCAAGTGATTTTGAAATTGAAAGTAGTATCAAGGAAGATGCAACACAGGTGATCTGTAAGGACATGGAGCAGCATAGGGCATTCATAGAAAAGTCTAAAAGGGTCGTTTCCCAGAATGTTGATCCAGGTAAATATTGTAAAAGAGATTGTGTCTCAGGAGGACAGTGGGAAAACCTTCACGGAATCCGACAGGGAAAACTGATGCCTCAGCCTCGAGATTTGGGGAAAGCCGTAGTGCATCAGAGGCCTCTTGTGGGGAAGAGGCCCTTCCGGCTCCTCAGATACGGAGAAAGCTTTGGAAGGAGTGCGCGTCTCATGTGCCGCATGACCCACCAGAAGGAAAACCCTTCTAAGTGTAGTGTCTGTGGGAAGTGCTTCGGTAGAAGCAGGAGTCTAGTCCGACACCAAAGAATCCACACGGGAGAAAAACCTTTCAAATGTCTCGACTGCGGGAAAAGCTTTAACGACTCCTCCAACTTTGGTGCCCACCAGAGAATTCACACAGGAGAGAAACCCTACAGATGTGGAGAGTGTGGGAAATGCTTCAGCCAGAGCTCAAGTCTCATTATACACCAGAGAACCCACACTGGAGAGAAGCCCTACCAGTGCGGAGACTGCGGGAGGAGCTTCACCAACAGTTCGCACTTCAGCGCCCACCGGAGAGTCCACACCGGCGAGAATCCCTACAAGTGTGTGGACTGTGAGAAAAGTTTCAATAACTGCACGCGATTTCGTGAGCACCGGCGAGTGCACAGCGGGGAGAAGCCCTACGGGTGCAGCCAGTGTGGCAGACGTTTCAGCAAGAGTTCTGTGCTCACCAAACATCGGGAGGTTCACGTAAGAGAAAAGCTGCTGCCGCCCCCGCCAGCATTCTGCTCCCCGGAGAACCCCCTCAAGGGCAAGACTGATGACTTCAGGCAGACTTTATGATGATGAGCTCTTCTCTTCCTAAACATCCCCTTAGCCATTTTACCCTGATCTCACTCTTGGAAGCAGTCTTTTCTTAGCTAGAAAGAGTCATTGCCAAGATAAGCTTGAGAATATAAATAAGCTAAAGGCTAGGATCCTGTTCTCACCTCTGCCTCTTACTTGATTAGTCTGTTCCTCTCCTATGTGTCTCAACCTTTTCCCTTTAATAAAGTAAAGAAGATACAGGGTCTGAATGCAGAGGGAAATTCTCTTCAGTATGTCGAGGCCACTGCCATGGGATCACTAAACCCAGCAACATCCAGAATCCTTCAGCGCAGGGGAGAGTTGTTGCCAAGGAGATGAAAAATGTTCAAAGTCGTTTTCATTATCTGCCATGTGTGATCCCGGATGCAACTCAATCACAGTTTCCTGTTTGGGTAGAAATTTCGGGAGCCTGATAAGAACCACATTGGATCTGTCTTGGGTTTGAAGGTATTCACAAAAGGAGATTGAAGATTTTTTCGTTCCCTTCAGGAGTCTGTTGCAGTGTACCTTTTTTGTGTCAAGAAGTTGATCTAAAGAGCTCGGGTAGTGTTTCTGTATTGTCACTGAAACAATGCCCTGCCCTCCATAGAGACAGGGCACAACTGATCACCCATTGTCCTTTGTAGACTAACCCTCTCTGTACCTGAAGACTGACATGCCCTTGGCTGTTGCCTCTCCAGCCCAGGAGTAATGCAATTCCCTTTACTGTTTCTTGTAAGTCCTATACTTACCTCTTCATTGTTCTGGGTGCCCTTGTCTGACTCTTCTGAACTACCATGCCTTCCTCAGACTGAGTAGCATGCATGCTCCTGGTGTGTCTCATTAAAGTGGAATTCAGACACTTTCCAGTTCTGAATGTGCAACTGCTCTGGTTTTTATCTAGAATATGACTGATAGGTGGCAAATTTTCTGCCTCCCAACCCCACATTTAGATATAATGTTATATAATTTTAGATAGTTTTTTAAAACTCTGAGGAGCCAGGGAAGAAGTGAGTTAGAGACCTGAAACATTCACTATTTCAAAGACCAGTTGGACTCCTTAACCCTGCTTTAGATCAGGTAGTCGCCTTGGTCCAGACCAGCACCCCAGGGCAGTTTGTTAAGTATACCGTTGTCTTTTTTTGAGGCCAGCTCTTGTTCATGTGGTCATAAACCTCTCTGTAGAGCCAAGTAATTTGTACAACTCTACAGCTCACTGAGTGAAGGTGGAAATACTTTCTTACACTTCCAGCCCAGAACACTTTCTGTTTTCCACACTTAACCTGTTGGTCTGAAAAGTCTCCTTGACACCCCCCAGCACTGACCCAATAACTACTGAAGGAAGGGTTCAGATGGGGAGATAGTTCACTTACGGATGTTGCAGATAAACACCTGGGATTTGTCATCCAAAGCTGTTACTTCGGGATGCGACCAGTGGCATTTATACCCTTAAGATGACCGTGACCTCAGGGGACTTTGCTTTGGGAAAGGAGAAGTCACAAGTTTAGTGGAAAAATAACCAGAGTCAAGGCTGTGTGTAGATCATTTTTTCACTTTTCTCCTTTCCTTTGTCAGATGCTGTCTTATTAGAAGACATCTGAGTATGTTTGAATTTTCTGAAACTTATCCAAGAAGGTACCAAGGAGGATATAGGCAGGAAGGAAGGAAATCCAACCTATGGTGTCAGAATAGGCTGTGGCCTGTTGGAAGGCAGGTGACTCAGGTAAACGTTGATAAATGTTTCTTTCTGACATGCGTTAGGAGCGTTACGATTGTTCACATCTCACTAGGTTGATTTCCGCTGCGTTGTCCAAATTATAAATCCCTAATAGTTAAGTGAAGTTTCACGTCACTAGTGTGCCCAGCACAGAGAGGTGTGTGTGGTGCCCGTGGGTGTGTGCTTGTATTGTGTAGATGTTCTGGAATCACTGCTCTAGAGAAGATGCACATTAATAGAGTCACCACTTAGTAATAGGTACCCAGGGTTGATCATTATATCAAAGCATGATTCAGGAAAGTAGATGATTTACTATAAGTATTAATTAAGCACGGTTATGTGTAAGGCTATGTTCCTAGGCACAGTGAGGGATATAGAAATGAAAAAAGGCTTGGTGTCTGTGCTCAAGAAACGTGCAACATGGTGAACGAACTATTGCAGCAAAAGATAATGCCAATTACATTCATGTCCGTTATGGAACATTATTTGTTCATTAATGAAAGAGCCACCTTCTCTTGCAGAAGAGTTTTTCTCAATGCCTAAAATCATATTCTCTACCTCCGTCTCTTAAACTTCCCCAGTGGCCAGAAAGGCTCAGGAACCATTCCTTCTCCAGGTGGAATAATCCAATTCTGTCTGTCATGTCTGGGATCATGCCGAGGTGGAATTTGGGTCCCCTTACCTATTCTCAGTTGTAAGTGGGCATTTGGACTTGTATTAAATTAACTGAATGAACTTTGCTTCTATAGAAGGAGACAGTCCTGCCCACCATCTTAGACCAAGGCTGTTTGTATTTTGTCTTTTTTCAGGTGGACATGAAAGTCAAAAGTGAAGTCACACTCTGATTACTGTGTCTCATATCACATAACATTGCCTTCATGACAATCCATACAAGTTTTTCCCCTAAGTTTCAGTAGCAGGGAAAGCTCTGATCCTAAAGCAAAAACAATGTTACCTTACAAACACTGTGACTTTTTTTTTTTTTTTTAAGCAACTTACTACTATTCTTTCTTTGTTCTGGCTGCTGGAACAAAGAAACTTACAAAAACAGAACTTTTAAGTCACCTCAGCCAACCACTTAAACATGTATTTACTTAATCCTGTCTTATATCTTTGTACCCCATATCCTATTTTTTTTAAGTGTACGTAAGTAGTCATTTTATTCTCTGACTTCTTAACCAAGACCCTTTGGAGCCTGGCTGTATCCCTGCCTGCGCTTACTGTGTTACTCCCACAAACACCCTAATTCTTACTGGCATTTTTATTACACATACAACCTACTTTATTCATCTGGAAGGAAACATTTTTTTTTTTTTTAAGAGGAAAACTTCACAGTATGCTTAAAACAGCTCAGGGCAGCCTGCCACCTAGAATAAGCATTAGACCAGAAGCTGTAAGACAGGTTTCATTCTTGTCACTACCACTTTCTGAGTGTTGTTGGACAAACCAGTCTCTCTCTGGGCCTGAGTTCCTTATCTGAAGAGAAGTTGAGCATGATTGCCAAGACCACTCCAGCTCCTATGAGGCTGTGGGGCATCAGAAGAGAGAAGTTATAAGACCAGGCCGCCACCCTGGCTTGCCACCGCAGGCAGCGTTCAGGCCATACTGAATCCATTCCATGAGTCCATCCCGTACTTCAGCAAGAGGTTGCTGTGAGCAGTCTAGGAGCATGCTCAGTGAGGAGAAGGGACAAATCACTCATGTTCAACAGCAGGCGACAGACCGTGGCAGGTAGCTGCAGTGAAGAAAGCCAATTTGGGGACCCTGGTGCCCCATGACAGACAAGCCTCAACTCTGAGGGAGCCGGGGACACCCCAAGTGCAATGCTAAGCCCTTACCTCTGAATGCATTCCTAGTATAAATGTATGTCCACTCATTGTTTTGTGTGAATGTTCACTTAGATGTCTTCTTGAAAACTTGTATGTGAAATAAATGTCTAAATAAATG EMBV3_08934 GGACCTCACCTTGGCCGACGAAGCCAGCAGGACCGCCACGCAGACCTGCGAATCCACGGT Variant GeneID:535416|SIRT6:NM_001098084:60_cdna 621^744 2 EMBV3_40114 GeneID:535416 7 GENE SIRT6 NULL sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) EMBV3_41252 GTTCTGAAGAAAGGAAGAGGGCCTTATGCAAAACAGCTTCCCCTGGACAAAGGATGGGAG Gene GeneID:515742|TMEM150A:XM_002691366:221_cdna UTR3_Alt 7 NULL GeneID:515742 11 GENE TMEM150A TMEM150 transmembrane protein 150A EMBV3_17404 GACATTTCTAATGTTTAGGGACCTTTAGTCGTCACTGTCGCTGCTAGAGGGCTTCTCGGG Gene BVT0102_096696 + 0 NULL GK000029.2:1719250-1871383 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164372 1 XLOC_100210 Coding TCONS_00164372 XLOC_100210 NonCoding Coding - 29:1868521-1869935 - TSS123003 718 3 TCONS_00164372_3 75 0.362116991643454 2 0.493276716206652 0.000449830477318034 0.000270403549729365 0.000441199627893851 2.97132254355046e-05 1.37525929179412e-05 3.8039906534144e-05 0.000138995279077453 0 0 0 0 0 0 0 0 0 0 0 0 7.13049995884549e-09 2.76674986403173e-05 2.06703900020386e-06 0 0 1.60391426235022e-05 1.4082834696849e-13 0 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 3e-57 226 85.22 0.274373259052925 0 noncoding 0 0 0 0 -0.0342182443219726 0.837482513477859 0.00217251100245321 0.977484512159507 GATGGCACGGCCTTAGAGTGAGGGCATGGCTGGCACTCGTCATCATTCCCTCATCATTATTCTACCTACAGAGCATGAAGGGTGACCCGGAAGGAGAGAAGCAGGGACCCGAGAAGACTGGAGTGGACGGAAGGGGACGGGAAGGTGTGTGTGGCAGTGGGGCCACCTCTGCCCCAGGGCCTTCCTCAGCCTGTGTATTCTCAGGGTTTTTCCCCCGAAACTTAGTTGCATTGGAATTTTATTACTGAACATTTGGTAATCATATTTAAACATCAGACATTTCTAATGTTTAGGGACCTTTAGTCGTCACTGTCGCTGCTAGAGGGCTTCTCAGGTGGTGCTGGTGGTAAAGAACCGGCTGCCAACGCAGGAGACACAGGAGATGTGGGTTTGATCCCTGGGTCGGAAAGATCCGTTGGAGGAGGGCATGGCAACCCACTCCAGGATTCTTGTCTGGAGAATCCCGTGGACAGAGGAGCCTGGCTACAGTCCATGGGGTCACAAAGAGTCGGACACGACTGCGCAACCGACACGCTGCCCAGTCACTGGGTCACCTGGAAGCTTGGGGGCTCCAAGTGCTGGGTTTTGGTGATGGTCCAGAAGCTGAAAGAATGGAGGGATATGGGGAAACCCAGGGCATCAGGCATGTACATACTCATGTGGGATGGCTTCTCGCTGTGGACTCTGATTTTAAATAAAGATCATTATGATTTTGCTG TCONS_00164373 TCONS_00164373 s 5' 0 TCONS_00164373 TCONS_00164373 s 5' 0 EMBV3_34699 AAAACTTTGATGATTACATGAAAGAAGTGGAGCATCGTAAACTTAGATGAAGGTGCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36549 GTTGTAATCCTTGCTTCTTGCCCACTTTACTCCTAGACAACCACTAATCTACTTCCTGCC Gene GeneID:507292|COMMD8:XM_002688237:41_cdna UTR3_Alt 2 NULL GeneID:507292 6 GENE COMMD8 NULL COMM domain containing 8 EMBV3_30206 TGTCCTGCCTTGCATCCAGCAAATCCAGAGGTAAAGATCCAGGGCCAGAACAAGGAGATG Variant GeneID:532573|FLOT1:NM_001076887:153_cdna 610^700 1 EMBV3_32379 GeneID:532573 23 GENE FLOT1 MGC143379 flotillin 1 EMBV3_11452 AGATGGTCCTCCAGTTCTTGCTGCACTCCCAAAATGACAGATGGCGAGACCTGGACAGGA Variant GeneID:615557|LOC615557:XM_002698578:150_cdna 95^187 1 EMBV3_11859 GeneID:615557 26 GENE LOC615557 NULL similar to RIKEN cDNA A930008G19 EMBV3_28871 GAACAGCAGACATTTATGAAAAGCATGAACCACTCATTACCCTGGAACCCTTGAAGTGTC Gene BVV0102_090276 + 0 NULL GK000004.2:52812811-53756421 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28679 ATTCTCGAGTTACGACGGGGAATTCAGGCTGCCTCTTGTGTTGGCCCAGGCAAGTCCAAT Gene BVV0102_007469 + 0 NULL GK000001.2:144071072-144176744 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00178735 TCONS_00073626 TCONS_00240375 TCONS_00149039 TCONS_00158315 TCONS_00148450 TCONS_00033207 TCONS_00178732 TCONS_00149040 TCONS_00218950 TCONS_00149037 TCONS_00218953 TCONS_00098202 TCONS_00117596 TCONS_00167122 TCONS_00098200 TCONS_00207545 TCONS_00162301 TCONS_00230834 TCONS_00088420 TCONS_00158397 TCONS_00206815 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00201119 TCONS_00131536 TCONS_00218951 TCONS_00185573 TCONS_00178730 TCONS_00178729 TCONS_00161424 TCONS_00253351 TCONS_00233533 TCONS_00222179 TCONS_00088422 TCONS_00218954 TCONS_00106013 TCONS_00238290 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00106012 TCONS_00230355 TCONS_00185604 TCONS_00107098 TCONS_00240373 TCONS_00223049 TCONS_00157045 TCONS_00231769 TCONS_00033186 TCONS_00054136 TCONS_00130054 TCONS_00207410 TCONS_00011614 TCONS_00178734 TCONS_00158779 TCONS_00162571 TCONS_00220551 TCONS_00218947 TCONS_00189710 TCONS_00186835 TCONS_00222177 TCONS_00142474 TCONS_00218948 TCONS_00054133 TCONS_00230354 TCONS_00148446 TCONS_00142472 TCONS_00129561 TCONS_00021875 TCONS_00207544 TCONS_00157807 TCONS_00231774 TCONS_00011613 TCONS_00166333 TCONS_00066112 TCONS_00230353 TCONS_00176791 TCONS_00131532 TCONS_00186489 TCONS_00238284 TCONS_00230829 TCONS_00157808 TCONS_00071703 TCONS_00131535 TCONS_00238280 TCONS_00054140 TCONS_00031770 TCONS_00222184 TCONS_00178886 TCONS_00249554 TCONS_00231772 TCONS_00106011 TCONS_00106016 TCONS_00231775 TCONS_00033206 TCONS_00098201 TCONS_00158314 TCONS_00071451 TCONS_00136035 TCONS_00186834 TCONS_00154284 TCONS_00071397 TCONS_00033205 TCONS_00012044 TCONS_00072307 TCONS_00131538 TCONS_00178731 TCONS_00201121 TCONS_00117597 TCONS_00207543 TCONS_00111146 TCONS_00212984 TCONS_00222175 114 XLOC_090921 XLOC_108508 XLOC_045388 XLOC_147039 XLOC_090916 XLOC_096769 XLOC_090330 XLOC_019441 XLOC_108505 XLOC_090917 XLOC_132269 XLOC_090914 XLOC_132272 XLOC_058448 XLOC_071762 XLOC_101958 XLOC_058446 XLOC_126060 XLOC_099183 XLOC_140324 XLOC_053207 XLOC_096851 XLOC_125335 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_122767 XLOC_080241 XLOC_132270 XLOC_111626 XLOC_108503 XLOC_108502 XLOC_098315 XLOC_156291 XLOC_143015 XLOC_135488 XLOC_053209 XLOC_132273 XLOC_062697 XLOC_144957 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_139845 XLOC_111657 XLOC_063009 XLOC_147037 XLOC_136355 XLOC_095505 XLOC_141257 XLOC_019420 XLOC_031945 XLOC_078765 XLOC_125926 XLOC_007165 XLOC_108507 XLOC_097231 XLOC_099452 XLOC_133868 XLOC_132266 XLOC_115748 XLOC_112886 XLOC_135486 XLOC_086899 XLOC_132267 XLOC_031942 XLOC_139844 XLOC_090326 XLOC_086897 XLOC_078274 XLOC_012548 XLOC_126059 XLOC_096262 XLOC_141262 XLOC_007164 XLOC_101171 XLOC_040830 XLOC_139843 XLOC_106565 XLOC_080237 XLOC_112541 XLOC_144951 XLOC_140319 XLOC_096263 XLOC_043473 XLOC_080240 XLOC_144947 XLOC_031949 XLOC_018015 XLOC_135493 XLOC_108659 XLOC_152497 XLOC_141260 XLOC_141263 XLOC_019440 XLOC_058447 XLOC_096768 XLOC_043222 XLOC_082254 XLOC_112885 XLOC_094044 XLOC_043168 XLOC_019439 XLOC_007594 XLOC_044076 XLOC_080243 XLOC_108504 XLOC_122769 XLOC_071763 XLOC_126058 XLOC_067046 XLOC_130301 XLOC_135484 Coding TCONS_00240375 XLOC_147039 NonCoding NonCoding - 9:45084102-45084709 - TSS180053 607 1 TCONS_00240375_2 90 1 0 0.0014561517737617 0.000204917806221251 0.000308613780687987 0.000688141400177621 0.000331372986689982 0.000673174294646278 4.93709491194038e-05 0.000572319368768953 0.00112497851936392 9.36251114803908e-05 5.00029655897134e-05 2.34558894661769e-05 0.00022777550258207 0.000445973692985851 0.000163036618101911 0.000274352645944331 0.00115557441897238 0.00172902105166504 5.90687174690082e-06 0.000372477484955843 1.49839012483846e-05 5.05985756991586e-05 7.5557217807089e-05 0.0005478162823447 2.51247904366433e-05 0.000192741587211946 0.00029128810358964 8.81817749988295e-05 8.79404480374118e-05 4.61054712855768e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 4e-29 132 74.53 0.345963756177924 0 noncoding 0 0 1 1 -0.12427855949283 0.297782699487679 -0.532865039178384 0.00054399190852659 CTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGAGGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGAGAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCGACCCACAAAGTTCCCCGAAATCCCGGTCTCCCTCGAGAGGAACACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCCCGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCT TCONS_00235392 TCONS_00235393 TCONS_00235394 TCONS_00235395 TCONS_00235396 TCONS_00235397 . 5' 84966 TCONS_00235392 TCONS_00235393 TCONS_00235394 TCONS_00235395 TCONS_00235396 TCONS_00235397 . 5' 84966 EMBV3_17999 TTCTGTGATGCAGGAATACACCCAGTCAGGGGAGCTTACTTTGCCTGGAAAGCCACAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38479 TTGTTGCAAAAAAAAATTATGATGGAAACTCAGCAGCAAGAGATGGCAAGTGTCCGAAAG Variant GeneID:615896|SYCP3:NM_001040588:76_cdna 703^830 1 EMBV3_14524 GeneID:615896 5 GENE SYCP3 MGC127286 synaptonemal complex protein 3 EMBV3_01168 GATCTGACTTGACATTCTACCCTCTAGCCTTCCCATCAGAGGTGCTTCTGGTCAATCCTC Gene BVV0102_178020 + 0 NULL GK000001.2:72020793-72024434 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38129 TCCCTGCTCCTGCCCAGCCTGCAGCTCAGGGAGGGCCCTGCCTAAACATCCATTTGGTCT Gene BVV0102_443501 + 0 NULL GK000007.2:4046722-4052317 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218632 1 XLOC_131952 NonCoding TCONS_00218632 XLOC_131952 NonCoding NonCoding - 7:4049103-4049845 - TSS162630 742 1 TCONS_00218632_1 83 1 0 0.0028054972197845 1.35423678376046e-05 0.000548754035007369 0.000223830943159222 8.65004890402561e-05 1.44624654492879e-05 0.000110032198833086 8.76845339078763e-05 2.12672825961513e-05 0.000110902863152722 9.56398900757661e-05 0 3.86695983524196e-06 0 9.91817969259368e-05 0 0 0 0.000405901371974561 0.00031983494892958 4.09128169598986e-06 0 0.000123639438581519 0.000180750748680036 0.000186751356179328 0.000398800679940781 0 2.58899852778562e-05 1.96277756706016e-05 8.10275293902359e-06 XM_005259861.1 SLC25A42 PREDICTED: Homo sapiens solute carrier family 25, member 42 (SLC25A42), transcript variant X1, mRNA. 4e-42 176 67.51 0.840970350404313 0 noncoding 0 0 0 0 -0.484490554509337 0.122292652699995 -0.0545326078125097 0.544641013879364 TCATTTTGATTTTTATTAAATATACTCTCTTGGCACAAATCTTTAAAATATATAAACATTATATATAAACAAAGTGTCTTCATGGCATCAAAATGTAACTCCAAATCAGGCCAGGCAACAGTGAGAGGGGTATGACTGCCAAGGGCAAAGGTCCAGCTGTGTGCAGGGCTCGGGGGGTGAGGGGCGTCGGCGCTGCCGAGGTGTGCTTGGCTGGGAGCCACCCTGGAGAGAGCCGCACTGGGGCCGGGAACCCTGGGGGCCCTCCCTGCTCCTGCCCAGCCTGCAGCTCAGGGAGGGCCCTGCCTAAACATCCATTTGGTCTCACCCACCAGGGGTGGACCCCCAGCCTGGGCACCTTACGTTCCCATCCCGTCTCCCTGTGAGGGGTGCCCCTGCCTCTCCTGAGCGCTGGGCAAGGCTGGGAGAGAAGGTGGGTGTGACATTTACCCAACAGGACAGCTCGGGCCCCCTGGGAACAAGAGTCTGGGAATAAGACTGGGGTTGGCTGGTGGAGACATGCAGGAAGGACAGAAGGAGGGGTCTTCCCACCCAGGGGACTAAGGCAAGAAAAATGGAAACAGGACAGAATAAAAGGAGGAAGTGGAAGTCACAACTGGAAATGCACGTGTGGCGGAGACACACCCTCTCAGACTCTCACACCTCACGGCTAGTAAGCCCACTGGGAAACTGGCCCTCTCCTTGTCCAGGTCCTGGAACCAGACTGGACTGGTTAGGGTTTANN TCONS_00211517 TCONS_00211519 TCONS_00211520 . 3' 1828 TCONS_00211517 TCONS_00211519 TCONS_00211520 . 3' 2569 EMBV3_32460 TGAGAGCAGACCGGCATTCTCCAAACTGGAGGACTTCTTTGAGGCACTGTCCCTGTACCT Gene GeneID:513539|LIMK2:NM_001038098:62_cdna Constitutive 0 NULL GeneID:513539 17 GENE LIMK2 MGC134164 LIM domain kinase 2 EMBV3_24145 AAGCCCATGCACTTTACCAACCAGGCCTTCACTTGGCCTCTGGACTTTAGACTCATGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27516 CTGTGCTGACGTTGCTTTGGGACGTTGATTCACATGCCACATGGTCAGAGTGTGCAGTCT Gene BVV0102_053144 + 0 NULL GK000018.2:10350465-10392422 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085372 1 XLOC_051855 Coding TCONS_00085372 XLOC_051855 NonCoding Coding SLC38A8 18:10353190-10355491 o TSS63775 2301 2 TCONS_00085372_2 163 0.149500217296827 1 0 0.00154095198085628 0.000749444815452297 0.0012042326282995 0.00126649714721989 0.000232295277052603 3.40167428880548e-05 9.12579292051915e-05 0.00130096265117558 2.00806029796747e-05 9.48505400102761e-05 8.89079875662224e-06 1.43903293645387e-11 3.11215975691906e-05 1.34177652076684e-17 4.29104028147555e-06 0 0 0 0.00026921383229416 0.000353670507207551 2.74730636986623e-06 0 9.17005841032394e-05 0 0.000183013476096079 0 0.00255781125638507 0 7.38420861607282e-05 0 XM_005218392.1 SLC38A8 PREDICTED: Bos taurus solute carrier family 38, member 8 (SLC38A8), 0.0 4150 100.00 0.999565406345067 NM_001080442.1 SLC38A8 Homo sapiens solute carrier family 38, member 8 (SLC38A8), mRNA. 3e-18 98.7 85.06 0.0373750543242069 0 noncoding 0 0 0 0 -0.308055939887205 0.339971125930902 -0.0347616708815108 0.490179278651385 CTGGAGGCCTGGGGGGTGGTCTCCGTGCTGGTCGGCGCCTTCATCTTCGGGCAGAGCACGGTGGCGGCCGTCATGGAGCTGCTGTGAGGGGCGGCCCGCGCTCCAGCAGGACGGGGGCCCCCACGGCTGCCTGCATCTGGCCGTGAGAACCATGTGACCTCTTCATTAAGAAGCTGGAGAAACTGACTCGTCCGTCCTTCCCAGGCTGTGCCTCTGGGCTTCCACTGGGTCCCGGGGTGTCTGGTGCGGTGGTGAGAGGTGGCGTAGGCCCTGTACGTGACCACAGACCCAGGGGCTTCAGGCCAGAGCGGCCGGAGCTCTGTCTGGAGCCTGGGAGTCTGGGTGTGCACGGGGCTATGCGCCCTCTCCCCACCTGCTGCCTCCAGCCCCCTGGTGCCCACTGGTCACCCTGGTGCTCCTGAGTGTGTCTGCACCTGCCGTCTCTGTCTCCAGCTACCTGTGTGTCCACGTGTCCCTCTTAGAGGGCCCAGGGTCCTCATTCGATATGACCTCATCTTAGTTACTTACTTGGGATGTACAAAGAACCTCTTTCCAAGTTAGGTCACATTCACCATTTCCTGGGGTTAGGACTGCAGCTTATGTTTCTGGGGGACAGTTCACCCCATAACTGGGAAGTAGGTGCTGGGGCCCAGGGAACCCTGCTTTGGGGTGTTGGGGTCAAAAACACGAGGTGAAGTCATGGCTCCGTGGATGAAAGCCCAGGGGGGCTGGGGGGTGCCATCTGCTGGGGAGATTTGGGGTGCCATTGGTTGGGGATGGCAGGGCACTCAAGCTGGTGCTCAGGCCAGGGCATGGGGGGCCCGAGATGTATACCCTGAGTTGGCCTCTCTCTGGTGGATGGGACCCCGAGGAGAGCCCCCTTTCCTCCCACTGGCTGGACCAGAAGAGTGTGGAGGCCAAGTGCGCCGTCTGCTCTGTGGGTCCCTCCCAACCCCACCCCGATTCTGGGCTGAGGAGCTGCGCCTGCAGCCGTGGTGCAGCAGGGTCTGTGGGCTCAGGGTGGAGGACTGGCCACTGCTGCTACGTCGAGTCGCTGTGCTCGCTCGTGCTGAGCCTGCCCAGGGCCTGGGACCCCTGGATGGACGTGGCTGGATTCCGGCCGCTCCTCCTCTGCCCCAGGACGTCCACCGGAAGCCAGTGGTGCCTGCGCCTGCAGGGGCTGACATCTGAGGACACCTCCCCCAGGTAGGCAGTGGCCGGGTTGCGCTACGTCACGTCGGGTGTGTGCGACGACGTCTTGATGGAGCTGTCACGTGGTTCGCCTGTCTCCCAGCTTGTCCCCCTGTGCTGACGTTGCTTTGGGACGTTGATTCACATGCCACATGGTCAGAGTGTGCAGTCTGGGTGTCTGTGGGTGTACAGAGTGGCTCCGTTGTCAGCAGTGCCCAACTCCTGTGCGTGTGTAGCCCCAGAGAAACCCAGGACCTGCAGCCCTGACTCCCCCTCCTCTCTCCCTCCGGTCCCCGGTGACTGTGGCTCTGTGCTCTGTCTCTATGGACTTGTCCGTTCCAGACATTCCATATGAATGCACGCACACGATACGTGGTCTTTTGTGTCTGGCTTCTTGGACTTAGCATACGTTTTCAAACGTTTTTACATGTGAGGGAACCGAGGCTTGGGAACCTCAAGGCTGCCTGTCCTGTGAGCTTCAGAGTTGGGTTGGGACTAATGAGGGGTTGAATTCCAATCGTCTGTCTTCTGAGCTGTAGCCAAGGCGGGGGAACTAGTCGACCCTGGGGGCAGGGCTGGGGCCTCTGCCCCGCCAGTGCCCTGGCTGTCCCTGAAGACTCTGACCCCGTGAGGGGACAAGGGACCCTTCTCCAGGTGCTCTGATCAACCCCACACCTCGCGTCCTCCTGAATGAGGGTCTCAGAACCGGCACATGAGCTGAGAAGTGAGATCATGGAGCGTTTAGCACCTGGAGCTGGTGCAGATGAACAGAGAGTTACATTAACCCTGCATGCTTGGTTCCAGGGTGCTGGCTGAGAGGCTGGGCCATGATAGGAGGGTCCTGGGTAAGAACCAAGCATGGTGGGCAAGGGGCGTGCTTAAAGGGATTCTGTGTGATAAGCAGCTTTGGAGTCAGACCACTGGTTTTGAACACTATCTGCCATTTGCTTTCTCAAAATCCAGTAAGTTTATTATGAACCTCCCCTAAGAATCCATTTCCCCACCAGCCAGTAAACCAGAGGAGGTTTACTGTGTGTGAGGCAACGTAAGAATTAAGACATGATGCTTTATGTACAGCAGCTGGTGGGCGACCCAAGCCATGGTGGTCTC TCONS_00085374 s 5' 0 TCONS_00085374 s 5' 0 EMBV3_39632 CCCCAGTCAGGCCGATCCGCTCCGCTCACGATAATTCAAAAATGGCAGAGCTCTTTATGG Variant GeneID:617261|ZNF280D:XM_002690858:232_cdna 138^278 4 EMBV3_05981 GeneID:617261 10 GENE ZNF280D NULL zinc finger protein 280D EMBV3_05753 CTGGAAACCGTCTTGCATTTTTGCCACTTGCTGTGGTGCTCCCATTCAAGTTTCTGAGGT Variant GeneID:532910|LRRC28:NM_001038156:44_cdna 678^780 4 EMBV3_42187 GeneID:532910 21 GENE LRRC28 MGC134389 leucine rich repeat containing 28 EMBV3_28374 GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTGTCGCAGAGTTGTGT Gene GeneID:615493|ZNF219:XM_002690736:448_cdna Constitutive 0 NULL GeneID:615493 10 GENE ZNF219 NULL zinc finger protein 219 EMBV3_22824 TGTCAGTATTACCACCTGATGGGCTCCAGGACTCACTGCCCTCCAGAGAACAGAAGTGAT Gene GeneID:286846|PI4KB:NM_174783:31_cdna Constitutive 0 NULL GeneID:286846 3 GENE PI4KB PIK4CB phosphatidylinositol 4-kinase, catalytic, beta EMBV3_00686 AGAAGGATCAGACCCACTTGAGACTGTACACGCAGCAGGCCACCGTTCACTCTTGTGTAT Gene GeneID:408001|MAP1LC3B:NM_001001169:87_cdna UTR3_Alt 1 NULL GeneID:408001 18 GENE MAP1LC3B NULL microtubule-associated protein 1 light chain 3 beta EMBV3_37097 CCCACTCTCTGCTGCTCTCCACCACTGTCCTATTGAACCAGGAAAAGTCACACAGTTTTA Gene GeneID:532572|LAMC1:XM_002694207:49_cdna Constitutive 2 NULL GeneID:532572 16 GENE LAMC1 NULL laminin, gamma 1 (formerly LAMB2) EMBV3_25434 AGCCCTCAGGCTTCAAGCATCCCTTTGCCATCGAGAATATCATCGCACGCGAGTACAAGA Gene GeneID:539181|FOXB1:XM_002690850:193_cdna Constitutive 0 NULL GeneID:539181 10 GENE FOXB1 NULL forkhead box B1 EMBV3_31099 ATAGGCCACGGGACAACTAAGCCCTCGTACTCCAGTTACTGAGCCTCCACAGCTCAACTA Gene BVV0102_265638 + 0 NULL GK000005.2:104397536-104402770 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33236 GGGATTGAAAGGACATGTGACACTCTTCTAATGTGCATTGTGACCGTCCTGAACCAGGGC Gene GeneID:281878|ITPR2:NM_174369:2_cdna Constitutive 0 NULL GeneID:281878 5 GENE ITPR2 NULL inositol 1,4,5-triphosphate receptor, type 2 EMBV3_22388 ACTCGTATGACACCACCTCCAAGCAGAGGACCCCATCCTACACGGACCGCATCCTATACA Gene GeneID:506349|INPP5E:XM_002691619:282_cdna Constitutive 0 NULL GeneID:506349 11 GENE INPP5E PMPCA similar to rCG45879 EMBV3_15887 AGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTTAGTCTGTCTAGGAGTTTACCAGG Gene BVV0102_268341 + 0 NULL GK000002.2:129634312-129652476 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220566 TCONS_00107436 TCONS_00210913 TCONS_00170890 TCONS_00174805 TCONS_00171428 TCONS_00206300 TCONS_00250275 TCONS_00207933 TCONS_00205125 TCONS_00174806 TCONS_00188145 TCONS_00219592 TCONS_00250500 TCONS_00147538 TCONS_00125692 TCONS_00123823 TCONS_00091907 TCONS_00242415 TCONS_00001867 TCONS_00001866 TCONS_00174808 TCONS_00174809 TCONS_00110426 TCONS_00000529 TCONS_00103962 TCONS_00132066 TCONS_00174807 TCONS_00001865 23 XLOC_133883 XLOC_063346 XLOC_129423 XLOC_103679 XLOC_104695 XLOC_103815 XLOC_124877 XLOC_153218 XLOC_126448 XLOC_124587 XLOC_114188 XLOC_132911 XLOC_153443 XLOC_089425 XLOC_077234 XLOC_075375 XLOC_056677 XLOC_149079 XLOC_000454 XLOC_066330 XLOC_000141 XLOC_062257 XLOC_080699 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_31571 ACAGTGGCCAGACTCCTTCCCAGATGGACCAGTTCTGCAAAGAACATGGCTTCACAGGAT Gene GeneID:528099|RAB32:XM_002690302:9_cdna UTR3_Alt 2 NULL GeneID:528099 9 GENE RAB32 NULL RAB32, member RAS oncogene family EMBV3_42410 CGAATCTCTATGTGTCAAGTAGTTCGGAGAGAACCAGCACGCCCTCTGCCCTCACCTCTT Gene GeneID:514939|PGD:NM_001143738:67_cdna Constitutive 0 NULL GeneID:514939 16 GENE PGD NULL phosphogluconate dehydrogenase EMBV3_27555 GAAGAAAAGCGGGAGGACTTAGTAGTAAAGGACAGAACCATGTGGGTAGGTGCATCCTGG Gene BVV0102_136440 + 0 NULL GK000027.2:37358418-37391495 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155618 TCONS_00155613 1 XLOC_094777 Coding TCONS_00155618 XLOC_094777 Coding Coding HOOK3 27:37278322-37367418 j TSS116399 11589 1 TCONS_00155618_1 601 0.0261454827853999 21 0.870161064032774 0.00160550041548097 0.00168379779231477 0.0012767134246749 0.000846244038551385 0.00132122990478093 0.000518229645067961 0.000870564524174811 0.000715673146241068 0.0020074360035616 0.000507827860572134 0.00023354350082284 6.21689632735329e-05 0.000312834923697797 0.000650408048147397 0.000723739383743615 0.00421691119168717 0.00197591972342385 0.00313857692928387 0.000105265168147888 0.00172766709482113 0.000954071214400752 0.000814179973618915 0.00167033980081357 0.00128923577118299 0.0022129388533468 0.00186698153665741 0.00072881046194926 0.000310829919045567 0.000177994247212057 0.00029890179275628 XM_005226117.1 HOOK3 PREDICTED: Bos taurus hook homolog 3 (Drosophila) (HOOK3), 0.0 2.074e+04 99.95 0.993096902234878 NM_032410.3 HOOK3 Homo sapiens hook microtubule-tethering protein 3 (HOOK3), mRNA. 0.0 4035 83.13 0.337647769436535 TCONS_00155618_1 sp|Q86VS8|HOOK3_HUMAN HOOK3_HUMAN Protein Hook homolog 3; 0.0 1182 98.50 0.998336106489185 1 coding 1 1 1 1 -0.00547207141423192 0.968930852804957 -0.0103552817113544 0.908936713648425 GGCCGGAGCCGCGGCGGGAAGATGTTCAACGTGGAGACCCTGGAGCGGGCGGAGCTGTGCGAGAGCCTCCTCACTTGGAGATCCTGCGTATTTTGATGAAAATTGGTTAAACAGAATCAAAACTGAAGTAGGAGATAACTGGAGGCTAAAGATAAGCAACTTAAAGAAAATTTTGAAAGGAATCCTGGATTACAATCATGAGATTCTAGGGCAGCAGATCAATGACTTTACCCTTCCTGACGTGAACCTGATCGCTGAGCACTCCGACGCTGCAGAGCTGGGAAGGATGCTTCAGCTCATTTTAGGCTGTGCTGTGAACTGCGAACAGAAGCAAGAGTACATCCAAGCCATCATGGTGATGGAGGAGTCTGTCCAGCATGTCGTCATGACAGCCATCCAGGAGCTGATGAGTAAAGAGTCCCCTGTGTCTGCTGGGAATGATGCCTATGTTGACCTTGATCGCCAGCTGAAGAAAACTTCAGAAGAACTAAACGAAGCTTTGTCGGCCAAGGAAGAAATTGCTCAAAGGTGCCACGAGTTGGATCTGCAGGTCGCAGCACTGCAGGAGGAGAAAAGCAGTCTGTTGGTCGAGAATCAGGTATTAATGGAAAGACTTAATCAATCAGATTCTATAGAAGATCCTAACAGTCCAGCAGGAAGGAGGCATCTGCAGCTCCAGACTCAGTTAGAGCAGCTCCAGGAAGAAACATTCAGGCTTGAAGCAGCCAAAGATGACTATCGAATACGCTGTGAAGAGCTGGAGAAGGAGATCTCTGAACTTCGGCAGCAGAACGATGAGCTGACCACTCTGGCAGACGATGCTCAGTCTCTGAAGGATGAAATAGATGTTCTTAGACATTCTTCTGATAAAGTTTCTAAACTAGAAGGCCAAGTAGAATCATATAAGAAGAAGCTAGAAGATCTAGGTGATTTGAGGCGGCAAGTTAAGCTCTTAGAAGAAAAGAATACTATGTATATGCAGAACACAGTCAGTCTAGAGGAGGAGCTGCGAAAAGCCAACGCGGCTCGGAGTCAACTCGAGACGTATAAGAGACAGGTAGTAGAACTGCAAAATAGATTATCTGAAGAATCGAAGAAAGCCGATAAATTAGATTTTGAATATAAGCGGCTAAAAGAAAAAGTTGACAGTCTTCAAAAAGAAAAGGATAGGTTGAGATCGGAAAGGGATTCTCTGAAGGAAACCATTGAAGAGCTTCGCTGTGTTCAGGCTCAGGAAGGACAGCTCACAACTCAAGGGTTGATGCCTCTGGGAAGTCAGGAGTCTTCAGACAGTCTTGCAGCAGAGATCGTCACACCGGAAATCAGGGAGAAGCTCATTCGTCTTCAGCATGAGAATAAGATGTTGAAAATCAACCAGGAGGGTTCTGACAATGAGAAGATCGCCTTGCTGCAGAGCCTTCTGGATGACGCCAACCTCCGCAAGAATGAGCTGGAGACAGAGAACAGGCTGGTGAATCAAAGACTCCTAGAAGTACAGTCACAAGTGGAAGAACTGCAAAAGTCTTTACAGGATCAAGGCTCAAAGGCAGAAGATTCAGTTCTTCTAAAGAAGAAGCTTGAAGAGCATCTAGAGAAGCTGCATGAAGCCAATAACGAGCTGCAGAAGAAGAGGGCCATCATCGAAGATCTTGAGCCAAGATTTAACAACAGCTCCTTAAAAATTGAAGAATTACAAGAAGCTTTACGGAAGAAAGAAGAGGAAATGAAGCAAATGGAAGAACGATATAAGAAATACCTAGAGAAAGCCAAAAGTGTTATCCGTACTTTAGATCCTAAACAGAATCAAGGAGCAGCACCAGAAATACAAGCTCTTAAAAATCAGCTCCAGGAACGGGACCGGCAATTCCATTCATTGGAGAAAGAATATGAGAAAACAAAGAGTCAAAGAGAGATGGAAGAGAAATATATTGTCAGTGCCTGGTACAACATGGGGATGACTCTGCACAAAAAGGCGGCTGAAGACAGGCTTGCGAGCACGGGGTCGGGGCAGTCGTTCCTGGCGAGGCAGAGGCAGGCCACCAGCACGCGGCGGTCTTACCCGGGCCACGTCCAGCCGGCCACCGCAAGGTAGACGAGTCCCGCCGCTGGGGTAGAAACACCCGCGTTCAACACACACTTCTGTTACATGGCACGGCATTTCAGGAGGTTCAGCCAGCTTGTATTTCGTCTCCATTTTACGTTACCCTTCAGTTGTGTCTCGTTGGAGGACTTTCTCTCTTCTGTATCTGTAATGCTTTCGTTTCTCAGTCCTTTATTCTGTAGTCCTGTCAGTTCCTTTTAATGTGCCAAAACCTTTTTAAATGCCCAGTTAAACGTGTTGTATATTAGTGCAGTACTTTTCTTTGTATGAAAATGTCCCTTCCCCAACGGTGTAGGCTTTGTAATGAATTAGATTTTCTGCCAATAATTGAGATACAATTTATATTCTCTATCGTGCCTCTGTGTTACCATGCTTTCTAAGAATGTCTTTGTTTAAAGGGAATTAATCTTTTTATGATGTATTAATCTGTGTTTTCAATTGTTTTCCAAATGCACTTCAAATAACTTACATATTTACTATATAAAATGGTTGGCAAGTGCACTTTTTGCAAAGACATAAATACATCGGCAGAGGTGCTAATCAGCTCTCACCCAAGGCACCTGAGAGAATTATTTAGAGGGGAAAAAAACGAGTTTTCACATTGTTTTATAGGAAATTAAATTTGAAGATTTGGAAACTATTTTTAAAACATAAATGGAATTTCATTATTTCCTGCTATATTGTTTGCTGGCAGAAGTGAATGTGTTGGTTAGGCTGTTTGAGGAGAAGTTACAGAAGAACAAAAATCAGGCAGTACATTCTTTTTTTTGGTTTTGTTTTGGAATATCACAGTAACTGAGGATCAGATTCTGGCAATGGGGATAACACTGAATTTCAACAACCCTCCACGTCTAAATGATTTATTTTTTATATACTTACAAGTCACAGGTAGCCTTACCTTCGGGGTAATTTCCTTGCTGACTTGCACCTCATTTGTCTTACTTATTCCTTAATATAGACCCTTCTGTTTCTCACTAATTCCTAATACTTAACATCTTACTATCAGTTATTAAGATCAGTAAGTGACTTCCTGTGTGTGACGTTTCTGACAGGTCTCTTTCTTAATTCTGTGGATGAGTCTAAGAATTTGCTGCCAGGCAGATTTTCTCTCGGGTATTTGGTTGCCCCAAAGTGCTTACATTTGTTGACAGATTATAAACTATTTATTTACGTTGATGAATGGCTGTCAAGTAACAGAGATTGTGAAGCACTTTGACTATATAAGGTGCTATGTAAATGCAAAATATCATTCATTTAAACATGAAATGTCTCTGGCTCGCTTTCCATATTGGCTTAAATATTTGGCCCCAAATTATATTAAATATATTCCCTTCCAGCCTTTCTCTTACACCACAACCCATTTTTTAAAAGCAAAAATTTACTGAAATTAGGTTGATCGTTTATTTGGTTTTGGTTTTAGATAGGTTACCTGTTAAGATTGTATTTCGTGTACTTGCTGTTTGGAAGTTCAGGTTTCATTTAGTTTTGTATATTAAATATAAATGAGTAACTTTAAATCAAGCTAAATGTACTTAAGAATTTTCAGAAAGTATATTTGGATGTCTGATTTTTAATCCTTATTTCCTTTTTTCTTTAAGAAAATGGACCTAAAATTATTTTAGGTGTTTTCATTTGTCCTCGGAAACTATAGCTGAAGAAAGGTATTAGAAAGTGTGCAGGAATGACTCCATGCATTGAGCTAATTTTTTACATTAAGTACAGAAGTCTGAGCTCAGTGTGAATGCCTCCACCTAGTAAGAAGAAAAGCGGGAGGACTTAGTAGTAAAGGACAGAACCATGTGGGTAGGTGCATCCTGGGGCTTCCGGAGGCTGGGCAGACCCAAGCCCATAGAATGTTTTGACAATAAAAGATTAAAATCTAAGATGGTTCAGCCTCGCCCACCCCACCACTTCCAATCCCCTTATTTCACAAATTAGAGAATGGATCCAACTGTTTTAAAATAAGGCATGAACACTAACCTTGGTAAAATTGAAATTACTGGTAAATAACACCTGCAGAATAAGATGGACTGAAACCAGAGTCCCTGAGCTGTTTCTTATGTGGGTTCTATCCCATAAGATAAGGAGTTTTCATTTTAATTCTCTAGTGCTAGCCCCGTCCTGGCCTACTACCCGCCCACCTACCCAGATTTGTTTTTCTATATGGGCACGTGCCAAGCTCCTGGAAGGAAATTTTCCATCCCAGTTTTCTCCGGCATCCCATTGTTTTGGTGTTTACATTCATAACCTTCACTCACCCTTACAGTATCCTAAGTTTTAATATATTGCTTTCATTCCATAACAGAAACTTTATTTCTAAACATTCTGTGATGTTTTTTGAAAAGCACGAATAAAACTGCACTGTCCCAGTGAGAACCCTATTTCCTTGGCCCAGCTTTTGGGCAGGGTTTTATGAATTTCTCTTTTCTCTGTGATGATTATTAATCTCTAGGAGGTTTGTGCCAATGCACGATCTCTCTGCAAGTTGTGAGACACTGGGCACCTTAGGTAGATGGGAGCTGAGCTGGGCCGTGCTGGACAGATGCCCACACACAGTGGCTCCATGAAGCCTGCGCTCCCTGGGGCAGTGGAGCCAGTCCTGATGCACCATAGAGTCAGCACAGAGTTACTGCGTTAAGGGTGGGGCAAGGCATCACCCCAGGTCTGAATTCTTCTAAACAAAAACATTATTTTCTGTTTTCCTTCTAACCAGGGTGAGAAAATACAAAGTTAGTAACTGAAGACCACAAAAGCATACATTTTATATTCTGCAGTGTGTATTTAACGAGTTTGTAATGGGGGAAAAAATCCAGCAAATATTACAATTTACCACATCTTTAAAAGAGAATAAAAAATACAGTTGTACTTACCTTACAAGAACTCATACAAACTCCATCAGATCTGTTTAGTATTTGTCTGATTACCTAATAACCAAGAAAAAAAGAAGTCCCAAAATAAAGGCTCCATTTTCTTTTTTTTTGGCCACACCACGTGGCATGTGGGGTCTTAGTTTCCCAACCGGGGATCGAACCTATGTCCTCTGCATTGGAAGCAGGAGAGTCTTAACCACTGGACCACCAGGGTAGTCCCAAGGCTCCGTTTTCTAAACACTGATCAGGATTGAATTATTTCTGTTTGATAAAACTGACTAGTGAGATGATTCATTATAATAAGGATGATATTGTCAGCTTTTGTTTTGTTGAGGTCTTAACCGCTTTGTCTGTGTAGTAACAACTCAACTGCACAAACTTAAGCTAAATGTTTCCACTCAGAAGCATCCGCCCACATTCCATCAGCAGGCGTCAGGAAGGCATGCAAATCTGTGCTGTTACAGACAGACCAGCAGTAAGCCATGTGAAGGGAAGTAGGGTTTAAGGTTGAAGGAGAGGTACATTTTTATTTACGAATCTTTTTATTCACACTTCCTCCTCAGTTGCAGTTTTATTTATTCACATCTAATGATACAAGATAGTTTTTGGAGTTTCTTGCTCTCCAAAAAGCATTCATCTTTTAAAGATAACACCATGTTAAAAGTCTGAAAATCTTTATCCAAATGTAAGAATTGTCTTGAAGCAAAACTCTAAATTTTTGAACTTATCCTAACTTCCTGCATTGAATCTCCAGTGGTCCAGATCTCAGACTCTGGGAGTGTTAGAACTTTTCCCCAGTTGGAACACGTGAGGTTTATCTGACAAAGCACTTGTAACCCAGATAGTGTAAACCTCGTTAGTTTAGAGACACCTAGATAAGAACTTCTATGACCCTGAAGGGAGAGGACAGTGCTTGGCGTTTTGCTTGTTTTGCTGAGAGCAAAACAGCAACATGAGTTTTGTTGTCTGTTCATTAAGCTGTGGGCCACGTTTTGACTTTTTATCCTCAAATTACAAAGTGACTCTGCCTAGAAATGGCTGTGGAACTACGGAGTGCATTTCTCAGCAGTGATGTCTGTGTGGTACCCCACAGGGTAGGAACAAAATAAGAGGGGCTCTCAGAATCTTTGAAAATTATTTTAGCACGCTTTTTCCTTTTTTTCCCCCCTTTTTATAATGATCATCTCTCTTCCTCTATTTCCAACTGTGAAAATGGCAGCTCATTTTAGTAATGTACAGCCCAGTTTCACTACATTTAAAAAGCAGTTTCAGAGCTTATTCTTTGTAACTATGATGATTCGAATATTTTGTATCATGACGTTTTTTATATGAGGGAAGCTATTCTCTGTCATCCTTTTTTTTACTTTCTATAAAGCATATTTAAATAATAATTGGTGTATGTTCATTCTGTTGAAAACTTTGAAAATGTTTTAGTGACCAATTTAAGCACAGTAATTTTGTTCTTAAGTTGTACAACAAATAATGTTTATTTCTCAGAAGCCTAAAAAACATAATCTGCTACTGACACAGCTCCCCCTCCCCATTCCCCTAAATCATGGAAGTGTCAAAATTTTGCTCCTTTTTTTCATAAAGTAAAGGGCAGGTGTGATGACCGCCATCCCTTTTCAGTCACTGATTATGTTCTTGAGAAATATGTACCAATAATTTGTTTTAAAACAGCCTTTTACCAACCCAATTCCCATGTATTTATAAAAGCTTTAAAATTTGTATTTAATGCTATCCTGAGATATATTTGGATTCTTCACACTGCACTTAAAATGATAGAGAAGGGGCATTACTTGAGAGACAAGAGACCTGAACCTAACTGTGGCAAGTGTGTGAGCCTGGCAGTTGTAGCCTGTCGGTGTTTCCTAAGCGTTCTGTATGAGTCTGGCATTTGTAGCCTGTCGGTGTTTCCTGAGAGTTCTGCTTCAGCAATTATGCCTCTCTCACATAGTTTTCTACCTTCTAACGTTTTCCAATAATACCCTATGAGATAAGTTTGTATGCTACATGTAAGAGCATAGAACTCTGAGAAAGTAATCTAAGGCTGCCAAGGCAGATCCATTCCTAGAGAGTAGATCAATTATTGGAAGAAGAAAAGACCTAATTACAAACAAGTATCCAGGCAGATGGAAGTGCTGACACCATTCAACCTACACTTGGTCTTAATAGTAATACTAAAGTAATAGTTTACATAAAATCTTCTGAATTTCCATGGTCATTCTGTTAAAAAAAAAAGAGTAGACAAAAATATTTTCTAATCGTCCTTCCTTTCAGTGGGCACTCCCTGGGCATAGATTAACTGTACATGTTTGTGAGTGGAGAGGAAAGCATCAGTTTTCATCTTGAAACTGGTAACCCATTCCTCTCTAAGATAGATCTTTAAGACTGTGAAGATAGGATGGTGTGATGAGATGAGACATCTACGGTGGCTGAAACTCACTACCAACTCCCTAGAAGTAACCTGGCTCTGCTGCTGTGTACAGTTTACAAACCATACACTCAGTTTTATGTCTGCCTTAATTATACATAGTGGCCCCGCAGAAGATCTTGTTTAAAATGAAGGCAAGAGTAGACTTCCTATGTGTATATATTCAAGGAGAGCCTTTGTATACCTGGTAACATGACTGCCCAGCTCTGAACTAGGTGTTCAGGGTCTGAAGATGAAATCATCAGAGAAGGTGTGTAGGTAGCCTCGGAATGTAAGGACGATGGGGCTATCAAATACCCTAAATTATATCAACTCAGAGCTTAAAAGGATGAGTAAGTTTCAAGCTCAGAGTGAGAAAAAGAAATTCACCAAAGCATGCTGAGGCTTTAATGCATGTGGGAGACTTCTGAGCAGTCGTCATTGCTTTAGAGATCTCTGAACTGACAAAGGAAAATGATTAGATTAGCATTGATACTGTAAAACTTATAAAAGGGACTCGTGTTTATTCTTGGTGTAATTTGTCAGCCTGTGGACAGTGATGACTGTATATACATTCTATATGTGTAGAATATATATATAGTGTTTATTTTATATATGTCACTATTAGAGTTGAATGTCTTAATATTATTTACTACTTCTACTCACATGTATTATTTATACTTTACTGCAAGAGTCACAGCACTTTACTTACTAACATTAGATAAGTATTTTCCTTCTACCTTTCTGTGGCATTTTCCATGTACATCTTTTCCGCCGGGGTTCTTTTCCTTATTTTGGAAGACTCACTAAGGAAGCCGTAAAAGACAGCCCAAATAAATGGGCTGTGCTCTCTTCCTGAAATGTCTAAAGTCCGATTTGAAGTTCTGAGTCTAGAATGCTATCTGAAGCTGGGTCGGGGCTGCGAGTCATTGATTATATTTTATGTCATGTTAATAAGACTCGTGAAGTTAATACTTATGAAGCAGGGTCTCTCATATACAGACACACTTTAAGCTCCTTGTTTCCTGGAGGTGCATTAACAATAAGTGAACAGTCTTCTGGTTCATCAGAAGATGCTGTCACCCTTCATTTGCCTGTCTCCTAAAAACAGACTGGCAAACTCTCCTTCACTTTCATAGTTTCTTCATCATTGCATGTACTTAGACACAGAAGAAAGCAAGCCAGATTCCAGGAGCTGTGACGTCCAAGAATCTGGAAAACGCTGGGGATGAGGTGATGGGAAGGAGCAGGTACCAACCGTGGCAGGATGCTACAAAAGTGGTCTTAGTTCTACTAGAACATATGCCTTATGAACTTGGCCATTTTCTTAAGTTCAAATATGGCAAAGTTTTCAGCTTTTTCTTTTGAGAGATGTTTTGTGGAGTCAGGACTCTTTTCATTTGTACTTGAATATATTTATATTCAAATCATAGTCAAAACATACTGAAGTATTTGTTGTTACATAAACATTAACACAGTGATTACTGCCAAAGAACAGGGAGATGCGCTCGTTAAGAACATGCTCGTAAGGGTTCTGTCTTAGGTTTAGATGAGAGAAGTGCTTGTAGAGTGTGGACAGTTTCTGCAGTGCTTTCTTCCCTGTCACCCTCTGTTCCGCTGATGTGCTTGGTGTAGGCAGGTCACCTGGAAGACAGAAGCACAGATAGAGAAGGCTAGACTCTAACCTGTGAGAGGAGAGCCACTTTTTATCCTCCCAGAGCAAAAAAATTAAACACACAGTCACACTCACACATGGGGACAGAACGTTGAACGGATAAATCACCTTCTAAATGTCTTGAGCATCCTTTGGCTTCTTGCTAATCTAGTTAAGAGCAGATACTGTACCTGCATTGTCCAATCCACTAGCCAATTCACAGCCACATGTGCTGATTTAAATTCAAGTAAAATTAAGAATCCGGTTCCCCAGTCCCCCAGCCACATTTCATCAGAAGCCACCTGTGGAAAGCAGTTACCATCCAGGCAGCACAGATCCAGAACGCGTCCATCATCGAAGAAGGCGCTTTTGACATTTGGTGCCCAGAGAGAAAATAAGGATGAAATAAAGACATTCAGTTAACTTATGATACACTTACAGATTTTTCTGGCATCAATAAAGAAAGGTATTTTTTTTATAAAAATTAATACCAGCCCTTTTTAAAGACCTTGAAAAATCAAAACCCCATTCTTTGAAACTAGTTTTCAATATATTTTTTAAACAGATTCTTAGCACTTTACTTTTTAAGTGGTATAATTAAATAACTTCATAAATCATAACTTAGTATCTTCAGGTTCTTCCCTTTTTTAGGTAGTCTTTTAAAATTGATGATAGCTTCTAACACTTATATCCAGCAGAAACTGATGAATGCTTATTTATTTACAGGTAAAAGTTGATAGACATCATAGTCCTCTATTCTGCTACTTTTAAATCTCTGTTCTGTTTCTTTTACATATATATAGATCTAAGGAGATTTGCCAGCAGTTTTTCATTTATGCCCCCAAAGTCACATTTGATCATCTATCACCTTAAAGGCATATCAAGATCTAAATAGTTTCTTTGATTTTCTTCCTAGTTTCTTGTTCTTAACTACTTAGATTGTGGATCAAGTTAAGTTTCTTGTATGAAGCAGATTTTATTCCAGCGACTTAGTTAATGAAACATTTTTTTAAGATTTATTCATTGCCTTGGCTTATTACTAAAGTGCTTAGCATGACTAAACAGATCTATACAAATGCATCTTTGAATTTTTTAGTGAATAGAAGAAACTAATTGTAACTCTTTGGAGTCAGCTTGGTATTTAGTGAAAACTATACTGTCAGGAAGTCAGATACTTTCCTCTGCCTTTTCAGTCTTTTTAATCAAGCTGCAGACTTAATCCAGTAGTATCAAATTACAAACAGCTGTAAAGAAATTCTTATTCAAGTACAGATGAGTAAATGGCATGATTTGAGTTTATTATTTTTTGGTGGCAGAATATTAACTCTATATTCTGCAGAGACTCATATTCTTAGTTAAGGGAAACTTTCAAGATGCTTGAAATAAGAAAGAACATGCTAGTATAAATACAGGAAGTGACTGTACACAAATGCCAATCAGTGATTTGGGGCCTTTTAATTTTTTTTAATAGTCTTTTGTTTTTTTAATAGTCTTAGTTATTAAAAATTCAGATGCACTAATATGCCATTGCTGTCACTAACTTTGCTGTTTACAGATTATATGTAATTCATAATGCTTTGTGCTCAGAAGAATAATTTCCAGATTTAATCTTGTTGTTTTGAAATTTGCCCCACCATTTATAGCACCCAATTTTTGGTTGCATAATGAATGGTAAAATTCAAACATATCTAATAGTTTAATAATTTGCCTTATTTCGATTAACAAATTCTATCAAAGATTTGGGGATAGAAAGAGGCTTTTTTTTTTTTCCTACAGTATTTTTTAAACTTTTCAGATGAGCTGGAAAACACTTTAGTACATTGGAGTTGGAGTTGTATTGGTTACAGTCCCAGCTCTATAGCCTTATACTCATGTCTTAAGTATCACTGATTGTTCTATGAATTGTTAGTTTGGCATTTGACATTGTAGTTATCCACCTTGCAGTTTAGCCTTTGCAAAAAGGATATTGCTAGGTGTGTTCTTATTTCTGGTTGACTATTGAATTTGTAATTTCACAATTTCATTCTGAGTCATTGTAATCCAAAAAGGAAAACCATGTAGGACTAAATTTTTCACCTCACAGTGAACACTGAATCAGTGCAGTTTTAGCAACTTCGTACAAAAATGCATCCGAGCAATGTCGCACCTGTTTGCCAGTCGTTGACTCTGTTAGATTCGTGAGTTTTCTCACTGTTTCTCTGAGGTAGATGACTTGTTAGAGAGCCTCAGAAAGAAATTTTCACCAAACTCACAAAAACATGAAGTCCAAGAAATCACCAGAAGACAGATTTTTAATTTTTTGAAATCTTATATTGTATTTCCTTTTGATGTCACTTATTCATTTTAATTTTATGACTGCCAACTTGTTATGGTATTAATTATATGTATATGTTTATATGTATGCATATAATATATGTATATGTATATGAAGAATAAAGTTAAGATTTGGTCAAACTATATTTTCCCATTCAAGTACAAAAATGTTTTCAAGGCTGCAAAAAGTGTACAGTTGTTAAACAAGTTGTAAATAAAGACTTGTATAAAAATTCAG EMBV3_41887 TTTTTGGTTGGAGTTCACGCTTCAGCAGCCCCGACGGAATCTCGATGTTTATCTTGCCTC Gene BVT0102_227539 + 1 EMBV3_22624 GK000029.2:19189738-19477922 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166670 1 XLOC_101506 NonCoding TCONS_00166670 XLOC_101506 NonCoding NonCoding - 29:19383513-19385161 - TSS124648 1648 3 TCONS_00166670_2 81 0.961771844660194 1 0 8.25588196493348e-06 0 4.64821324795184e-05 6.10269330853012e-05 9.98620372750909e-05 4.30283241683402e-05 1.79881707946128e-05 2.24314445419363e-06 0.000136817760762098 6.583112746411e-06 3.20857070336082e-06 5.6581893594799e-06 3.21671809079666e-05 6.95294458009045e-07 4.52679199747175e-05 8.42134909920714e-05 4.53735643483015e-05 0.000118793299576714 5.00399191862528e-05 2.4000540201061e-05 3.91439266419475e-06 0.000237910089210501 4.56013119550512e-05 4.60550664582918e-05 9.74043406000362e-07 2.6125897062535e-05 2.1331862091536e-05 1.36734143147411e-05 2.36380159580555e-05 3.1512400780918e-05 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 989 83.82 0.538834951456311 1 noncoding 0 0 0 0 0.0418002034799761 0.778573285061736 0.018534516378127 0.713640672576297 CTCTCAGGACAATGGAAGGGTCCTGACCCATTATTAACTAGCGGTCGAGGATGTGCTTGTATTTTTCCACAGGATGCAGATTCTCCAATTTACATCCGGGACAGACTGATTCGCCATGTTGCAGTCCCCCAGACATCCAGTTCTCTCATTGCTTCGATCACAAAAGAGGAGCCCGCCGGAAGGGGAGGCAAGATAAACATCGAGATTCCGTCGGGGCTGCTGAAGCGTGAACTCCAACCAAAAAATAATTCTACTTATTCTGTTTTGGCTTGTCTATCCTCTCCTTATGTTTTTCTCTTTACCAACGATTCTGGAAAACTTAATGTACATGTGACTTTTCACTGGTGGACCCAATGTAGTGACTTGTGAACAATGCATGCTCTCATCTTGTTTAAACCCTCAATATAATGTTTGCTCCTTTGTAGTGTTATAATGTCTACCTTATCTTATGATGTAACCACTTATTAATATAACTATAGTCTTGCTGTATTACAACAACTTCAGGATTTAATGCCATCGTGACAATTTTTGGGCCTATTATTTTAGGAATATCAGCTTTAATAGCAGCAATTGCTTCTGTTACTGTGGCAGCAATATCATTGACTCAACAAGTGCATACTGCCCAATATGTTGATACCATGTCTAAAAATTTTTCTTTAACAACACAGGAAGTTATAGATAGAAAATTGGAGATGAGAGTAGATGCCTTGGAAGAACCAATAATGCATATTGGGACTGAGTTACAGGCTTTAAAAGTGAAAATGGCTCTGTCTTGCCACGCTGATTACCAGTGGATATGCGTGACATCTTTAAAGGTAAACAAGACAGATTATAAATGGGAAAAAAATTACAAATCATATTTCAGGTGTTTGGAACAGCTCTGACATTGGCCTGGACTTAGGGAAACTTCATAATCAAATACAGACCCTGGAACACTCTCAACTGGATTTTACCGCCGCTGGAGCAGCTAATGACTTATTTCACACCTTCTCTAACTTTTATTTCTGGAAAAAACATTCTGTCTAATATCTTTAGTTCTAATTTTGCTTCTCATAATCATTCTTCCTTGTATTGTCAGGATTCTTCGGCAGAACATTCAAAAGCTCGCGACTGAGCTGCATCTGGCTGTTCTAAGAAATAAAAAAGGGGGAGATGCTGGAAGCCGGCATATTGCATATTGAGTGCATATTGCATATTGAGTGCAGCACTTTCCACAGCATCATCTTTCAGGATCTGGAATAGCTCAACTGGAATTCTATCACTGCTGGGAGCCAGCGTGAGGAACTCCGCCCATGACAAAGGTCGTGAGGAAGGAGGCTCGGCATTCGCAAAGGTGGGATCGAGCTTCAGGGGTCCCCCTGGAAATTCTCGAGCATCTAGCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTCTGAAAAAAAAAGAGTTAGCTTACAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTAACCTACAAACTCCTTTGGAAATCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACACGTGATTGTTCAGAGCCTCCCAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAG TCONS_00164594 . 3' 92762 TCONS_00164594 . 3' 94409 EMBV3_18538 TGCCTGTGCGCACTCAACCTACTCTACACAGCTCAGCTCCTGGAAGTTGGTTGGAACAAT Variant GeneID:526460|TSPAN13:NM_001035362:35_cdna 245^493 3 EMBV3_43222 GeneID:526460 4 GENE TSPAN13 MGC128160 tetraspanin 13 EMBV3_03460 ATGTTTCTTTCTCAAGAAGACGTGGAGGCTGTTTCTGCCAATGCCACTGCTGCTACCACG Gene GeneID:506525|RCOR1:XM_002696778:475_cdna Constitutive 2 NULL GeneID:506525 21 GENE RCOR1 NULL REST corepressor 1 EMBV3_36686 ACCTCATCCGGAAAGGATGCCACCTCTTATAGCAGACAGCCCTAAAGCACGATGTCCACT Gene GeneID:538954|PRKAA2:XM_002686380:187_cdna Constitutive 0 NULL GeneID:538954 3 GENE PRKAA2 NULL protein kinase, AMP-activated, alpha 2 catalytic subunit EMBV3_07877 CCATCCGAGGGCCAGAGAACGAGGAGGAGAAGAGTCCAGTGCTAGATGGAGATAGATATA Gene GeneID:518675|BZRAP1:XM_002695596:151_cdna Constitutive 0 NULL GeneID:518675 19 GENE BZRAP1 NULL benzodiazapine receptor (peripheral) associated protein 1 EMBV3_31109 AGGAAGCACAAGGAGAATGTGAAAGACTACTATCAGTTTTGTATTACTTGTACTTAACCA Variant GeneID:614553|SNRPC:NM_001076334:158_cdna 168^557 3 EMBV3_00655 GeneID:614553 23 GENE SNRPC MGC134384 small nuclear ribonucleoprotein polypeptide C EMBV3_27384 GACCCTGAGTGTCCCTGTTCCCTGCTCAGTCACTGTGATAATGAAATGTCCCTTCATGTA Gene GeneID:788112|LOC788112:NM_001105468:178_cdna Constitutive 0 NULL GeneID:788112 22 GENE LOC788112 MGC152527 similar to myeloid secondary granule protein EMBV3_34912 GACGAAAGCCAACCATGACCCGGGAGGGAATCAAGCGCAGTGAAACGATCCATGAAGTTT Gene BVT0102_181517 + 0 NULL GK000030.2:17195540-17305527 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246424 TCONS_00246425 TCONS_00243833 TCONS_00243844 2 XLOC_150974 XLOC_150272 NonCoding TCONS_00243833 XLOC_150272 NonCoding NonCoding - X:17223630-17256276 - TSS183368 1273 2 TCONS_00243833_1 49 5 0.961157910859243 1.25891722957666e-54 0.000511336295844964 0.000551607515196838 0.000299221211253929 0.000112974422370161 1.99004613247e-13 7.98283988276441e-76 0.000119451338002618 0.000739903324921272 0.000107331727236921 3.8863033471403e-38 0 3.95368372771251e-175 1.02300419005541e-52 0.000319187736381157 0 0 0 4.27580283595918e-05 2.02051413134969e-05 1.32260726778079e-86 0 0 0 0.000450440725021985 1.97319664802918e-89 0.000252935613367081 0 0 0 XM_005210930.1 RPS12 PREDICTED: Bos taurus ribosomal protein S12 (RPS12), transcript 5e-19 100 81.90 0.0801256873527101 NM_001016.3 RPS12 Homo sapiens ribosomal protein S12 (RPS12), mRNA. 2e-17 95.1 80.95 0.0801256873527101 0 noncoding 0 0 0 0 -0.592413794844019 0.10042840255253 0.00798489986339362 0.871214569615008 AGGGCAGAGGTGGGTGGCAAGCCCTGGGTGGGGGAGTGGAGAGTGCCCGGCCAGCCAGGGATCACAAGACTGGGCTTCAAGTCCTGCTCTCCTTCTGATGAGCTCTCCAACAAGGGTAACTATGCTCTGATTGACAGTGAGAGGAAAAAACACTTTCTTCCTTACCCCTTGAGTTTGACTGGACTTCCCTCCTGGCTCAGCCGGAACAAAAGCCAAGTTTGTTATTTGTTCATTTCTTGCATTTGAAGTTCTCCCCCTCGACGTCATCCTTGGCCTGAAACTCTGCTCAAGTCCTTAACTACCACACGACGGCAACCAGCCACTCCAGGACTGGACCAAGTTAATCCATTTCTGCAAAATGCCCAAGGAGCCAGCATGACTTGGAAATGAAGGACAAAAGGGACCCTCTGAAGATTCAAAGACCTCTCAGGACAGTTGATGCCAAGAAATGGAGTGCTTGAAAATGCCAAGAAACTTCATGGATCGTTTCACTGCGCTTGATTCCCTCCCGGGTCATGGTTGGCTTTCGTCCCAGGCCTCCTCTGGTAGCCAACTCCCTCATTCCAGCAATCATTTCTTTGCAGGAGTTTGCTTCTAACCTTTCAGCGTGTGTCCCAAATATTTAGGGATGGACTCAATCCAGTAGAATAATTTCTTTCCTTGAACTCATTGAAATGACTTAGGATAAATGAAAGCTGTAAGCTGAATAAACATTGCCGGTGTCTCGGCCCAGTCCCTGCTGGCTAGAGCCTCCCCAGTTGAGCAGTTCCTGGGGCCCCTTCCGCTCTCTCACCTTCCTTGCCGATCCAAGGGCACCTGGGATGGAATGATCCAGGCCCACGTGTAGGGCTTCTTTGTAAGGTGCCAGTCAACGCTGCTCCTGCAGCAGTCAAGCCTGGAGGATTCTATATGTGTCTGTTTGTTTCCTTCAAGTTTATTATGGGGCGTGACACCTGTCATTGATTATCTGACCATGTAGCCTGGCTTGGCTGTCTGAGGAGGGAAAGAGTTGGCTTCCCTGTGGATGGGAGCAGGACCCAGGGCTGGCACGGGGCAGGGCTACATCAGGCTCCCTGGCTCTGTTTACTGCTTGCTATTTTGAGACTTTCTTTGCATGGAAATGTCGCATGGCTCCAATGCTCGAAAGAAGTGTGAGCTGAGAGCCACATGAGGGAAACATTTTGGATGTGTTGACACATTCTGTTTATCTTCCAAAACTCTCTTCGGTGGTGTCTGCTGCCCAGGCAAACTGAGGAAAAATGGAGGTCTGTGG TCONS_00246422 r 5' 25837 TCONS_00246422 r 5' 25837 EMBV3_03214 AGTATCATCTGTTACTATAATACCTACCAGGACTAATTGTCAGCCTGGAAAAGGAACTTG Variant GeneID:533155|MAPKSP1:NM_001075982:11_cdna 340^403 2 EMBV3_13973 GeneID:533155 6 GENE MAPKSP1 MAP2K1IP1 MGC139753 MAPK scaffold protein 1 EMBV3_10721 GGAGTCCACGGTTCAGACTATCCTTGTTTTCCAGTTGCCTCTCTGCAGCCATCACATGGT Gene GeneID:785162|LOC785162:XM_002697418:127_cdna Constitutive 0 NULL GeneID:785162 23 GENE LOC785162 NULL similar to olfactory receptor Olr1750 EMBV3_42911 CTGGCGGCCATCGGTGCGGACCTGAGCAAGGAAATGCTGTGATTATCAAGCCTTCCGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38727 GCAGTTCTGCCTTGGTCCTGTGAGCAACCTTCAGAAAGGCCCTTGGACTCCACTCTGGAA Gene BVV0102_261281 + 0 NULL GK000025.2:209521-214005 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15797 GGGATGCAGCAATGGGCGCTGTCGCCGTGGAACCTGTGTGCAGACACATTAGAAAAGGAT Variant GeneID:519992|USP16:NM_001076867:5_cdna 64^165 1 EMBV3_16960 GeneID:519992 1 GENE USP16 MGC143424 ubiquitin specific peptidase 16 EMBV3_37738 TCTTCTAGCGTCTCCGGCTCCCTGCAGCAGGCAAAGGGGAAGATAGCGATGTACTCAGTA Variant GeneID:515858|C8H9orf82:NM_001038120:11_cdna 366^801 1 EMBV3_37383 GeneID:515858 8 GENE C8H9orf82 C9orf82 MGC133601 chromosome 9 open reading frame 82 ortholog EMBV3_13539 TAGAATATTGTCCACATTTCGCAGGCGGGAAACAGGCTCAGAGAGGCTAGAAATCCCACC Gene BVT0102_181329 + 0 NULL GK000012.2:21382690-21415743 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036477 TCONS_00036479 TCONS_00036480 TCONS_00036482 TCONS_00036478 TCONS_00036483 1 XLOC_021159 Coding TCONS_00036477 XLOC_021159 Coding Coding ATP7B 12:21414045-21425513 j TSS26551 3433 1 TCONS_00036477_2 458 0.0544713078939703 9 0.701404028952647 0.000197854229293431 0.000171474929754073 0.000404948231709625 3.69977636728738e-06 1.49383327879936e-245 2.46805782138871e-06 8.62334220062126e-06 5.21628719818078e-05 0.000254067013372441 6.287452419107e-14 1.3738715213427e-70 1.04115037872036e-05 0 1.36478313375909e-06 2.20627799845978e-06 0.00173886239808029 0.00130031981837112 8.94926125514911e-09 0.000557815072103385 0.000324143529772117 0.000155702637921358 0.000102568459696587 3.7731762474225e-14 8.69932039875617e-60 0.000171912308294559 1.46834075680066e-18 0.000166960164946864 1.19918630876456e-05 3.78821969045248e-56 3.54825899043532e-76 XM_596258.6 ATP7B PREDICTED: Bos taurus ATPase, Cu++ transporting, beta polypeptide (ATP7B), transcript variant X6, mRNA. 0.0 5669 100.00 0.915234488785319 XR_245388.1 ATP7B PREDICTED: Homo sapiens ATPase, Cu++ transporting, beta polypeptide (ATP7B), transcript variant X13, misc_RNA. 0.0 1427 83.73 0.389746577337606 TCONS_00036477_2 sp|P35670|ATP7B_HUMAN ATP7B_HUMAN Copper-transporting ATPase 2; 0.0 756 87.19 0.96943231441048 3 coding 0 0 0 0 0.0419454864317229 0.731107323222461 -0.0513590474926932 0.283226854603977 GGCCAGGGAACACGCCCTTCCTTTCTTGAACGTGGAGCTGGAGGCTTTTGCACTGACGCAGGCCAGAGAAAACTGTGCTTGGCCTGGCAGACAGGGTGGACAGGGAAAAGGGCAGGCCCCCAGGGTTGCCCTCCTGACATGACACCAGGAGAGGTCTGCACAATGTTACTGTCTGGGATAAAGACCGTGATGTTCGACAAAACCGGCACCATTACCCACGGGGTCCCCAAAGTCTCACGGGTCCTCCTGCTCGTGGACGTGGCCACGCTGCCCCTGCGGAAGGTGCTCGCTGTGGTGGGGACTGCAGAGGCCAGCAGCGAGCACCCCCTGGGCGTGGCAGTCACCAGATACTGTAAAGAGGAACTTGGCACGGAGACCCTGGGGTGCTGCACGGACTTTCAGGCAGTGCCCGGCTGTGGAATCAGCTGCAAAGTCAGCAGCGTGGAGAGCATCCTCGCCCAAGGCGAGCGCCTGCAAGGCCCACTGACCACTCACCTGAACAGAGTCGGCAGCAACCCCACAGAAACAGACGCGGCCACGCAGACCTTCTCTGTGCTGATCGGAAACCGGGAATGGATGAGGCGCAATGGCCTGACCGTTACCAGCGACGTCCGCGACGCCATGACCGACCACGAGATGAAGGGCCAGACAGCCATCCTGGTGGCCATCGATGGTGTGCTGTGCGGTATGATCGCCATCGCGGACTCGGTCAAGCAGGAGGCCGCCCTGGCCGTGCACACGCTGAAGAGCATGGGCGTGGACGTGGTGCTCATCACCGGGGACAACCGCAAGACAGCCAGGGCCATCGCCACCCAGGTCGGCATCAACAAAGTCTTTGCGGAGGTGCTGCCTTCTCACAAGGTGGCCAAGGTCCAGGAGCTGCAGAACCAGGGGAAGAGAGTGGCCATGGTGGGCGACGGTGTGAACGACTCCCCAGCCCTGGCACAGGCTGACGTGGGCATTGCCATTGGCACGGGCACTGACGTGGCCATCGAGGCGGCCGACGTCGTCCTCATCAGGAATGACCTGCTGGATGTGGTGGCCAGCATTCACCTCTCCAGGAGGACCGTCTGGAGAATACGGCTCAACCTGGTGCTGGCGCTGATCTACAACCTGATCGGGATCCCCGTCGCGGCAGGTGTCTTCATACCCATTGGTGTTGTGCTGCAGCCGTGGATGGGCTCGGCGGCCATGGCGGCCTCCTCTGTGTCTGTGGTCCTCTCGTCACTGCAGCTCAAGTGCTACAGGAAGCCGGACCTGGCGCGGTACGAGGCGCAGGCGCACGGCAGCATGAAGCCTCTGAGCGCGTCCCAGGTCAGCGTGCGCGTCGGCATGGACGACCGCCGGCGTGACTCCCCGCGGGCCTCGGCCTGGGACCAGGTCAGCTACGTCAGCCAGGTGTCCCTGTCCCCCCTCAAGTCCGACAAGCTGTCCCGGCACAGTGGCGCGGCCGATGACAGGGGCGACAAGTGGTCTCTGCTCCTGAATGACCGGGACGAGGAGCAGGGCATCTGAAAGCCGCCCCCGTGGCTGAGGCTCCCAGCCAGCAGCGGCAGCAGCAGGCGGCCGAGCCCCTCCAGGCCTGGGCGAATATTCTGGATCACCCTTTCCCTGCACCCAGGGGGCTCGATTCCCCGGGTCCCACGGGCTCGGGAGAAGGCGTGCTTGCTCACGCTTGTGGGCTCATCGCACACCTTGCTGTGGCCTCAAGAAGAGGAGGGACAAGCCCTCCTCGCATCCCCTGCCTTAGCACTTGTGACACGACCAGTCTCATCGGGTCCAACATCTTCGCTGTGCACCTCCACAGAGCTCATAAAAACTTAGGGGTCTGGCTCTTTCTGACAGCACCCCCGTGCATCGCGAACCCGAGACCACCGTGTACCTCAAGCGCCCCCTTGTTTTCTGCTGGGGCCCCCTCTTCCTCCTCTGCCCTTGATGGTGGGGGTGTGACACCCCATCATCTGAGGGCAGGGCTGATATCATCACTTCCCCTCTGCTGCTCTCCAAGGGGCTCCTGTGCTCCTGCCTGAACCCCTGCCCACACGACCACCAGAGAGCCACGCTTCTCCTCGGAGACCAGAGGTCTTGGTTGCCCGCGAGCTGCTTCGCGCTAGAGTCCCGGCTTCTCACGCTCAATCCAGTGTGGTTGCTGACTGTTGCTGCCTAGCTGGGCTGAGGGTCTGAGAGCCTGAGGCTTGAGAAATTTGGCTTCCTGTGGGGTCCTGGGGAAGGCACGTGGCTCAAGATTCTGCTTGCCTGGTTTCAAGGGTTTCAGTTGCATGGCCTGTGGTGTGACAGTCGCCTCACAGGGTCTGGTATGGGGTTCAGGTCTGTGCTCCCCAGAGCTGTGCAGCCCAAGTAAGAGGACACCCCAGCCCTCCACAAGCTTCGACTCCTGCACATGGAGCTGGTGCCTTAGGAAGGGGGTGCCCACCACTCCCAAGGGAACTGTTTCTAACTTCAGTGACCTTTATGGTTGCAGGATAATCAGAGCAACAGCAATGGGCCCATGGCAGACTTCGAGCTTGGTGGTGATTGGCAGAGCCTGTGGGAGTCTGCAAATACTAGCCAAATCTTAGACTGAGTAGAGTCTGTTCTCAGTTTCAAGGGGGAAGCCCTTATCACACACACTTTAGTTAGTTATTGTCAGTTATTTTTTAGGGGGATATAAGCACTTTTTATCGCTTACCTCTAATATTCACAATGAACTAGCGAAGTAGATAGAATATTGTCCACATTTCGCAGGCGGGAAACAGGCTCAGAGAGGCTAGAAATCCCACCAAGGATCACACAGCCAGTGTGCATGCCAGAGCAGGAATCTGAATTCACATCCACGGGCCCTGAAGTCTTTTCTTTAATTTGGCTCTACTGTCAATATTTTGTTTGATAAGAAGCAACAAGGAAAAGTCCCTTGTTCCTGGAAGAACAAAGCTGCCAGGTGATGTATTCACTGAACTGGCTTGAAATGTGACTGCGAGGTCATGTCACATTGCCTTCAGATAGCTCCTTCCCATTTGCATATAATTGAGTCTGTGCAGCGTCTTATCCTTTAAAATCCGTGTGCAGGGTAGAGGTGTGGTTTTGCTTCCAGTCTTCCTTCCCCAGCCCTGTCCTGCTTATGTTCTCAGTTGTGTCCTTTCTCTGTTCCCAGCTGCTGCTCAGGGAATGTTTCCTGTTTCCCTCCAAGAAGCTAATCATCTAAAGAATCCAATTGTAATCAATTTTTCAAAAAGCTTTTAGGACCCTGAATGTTATGTGTATAGGGACATGGAGATATTTATATAATTGTACAGAAGATAACCTTTTAGATGTTCAAAAAGTGTCAGGAATGTTTTGTTGTTCGTTTTTTTGGTCAGGAAAGAAGAATTCCTATTTCAAAAACATTCCATGCTATATTTAGAATAAAATTTCATTTTTTGTATTCATCTAAAAA EMBV3_03303 GGTGCGGCAAGGATGAAAATATGCCAGTCGCGTTTGAGAAGACCCAAGGAGGCACATTGT Gene BVV0102_050473 + 0 NULL GK000030.2:131814092-131866080 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245763 TCONS_00245759 TCONS_00245766 TCONS_00245764 TCONS_00245762 TCONS_00245757 TCONS_00248340 TCONS_00245765 TCONS_00245760 TCONS_00245756 TCONS_00245761 2 XLOC_150820 XLOC_151573 Coding TCONS_00245760 XLOC_150820 Coding Coding PHKA2 X:131723576-131818806 j TSS184420 8843 1 TCONS_00245760_10 1231 0.0438765124957594 34 0.907496665931597 0 0.00148885959219095 0 0 0 0 0 0 0 2.40100188358054e-06 1.85481931023756e-05 4.73147159076497e-05 9.50206184515927e-05 0.000890803639389585 0 7.05091915564521e-12 1.95039654415357e-19 7.91001190453944e-20 0 0 0 1.39135841843189e-15 2.1682761369727e-05 1.10432214313862e-16 0 0.00490814294960753 0 2.00297171653941e-20 2.76306629750617e-23 7.57201369196553e-105 XM_005228392.1 PHKA2 PREDICTED: Bos taurus phosphorylase kinase, alpha 2 (liver) (PHKA2), transcript variant X3, mRNA. 0.0 7432 100.00 0.465905235779713 XM_005274548.1 PHKA2 PREDICTED: Homo sapiens phosphorylase kinase, alpha 2 (liver) (PHKA2), transcript variant X1, mRNA. 0.0 5101 90.07 0.423046477439783 TCONS_00245760_10 sp|P46019|KPB2_HUMAN KPB2_HUMAN Phosphorylase b kinase regulatory subunit alpha, liver isoform; 0.0 2346 93.42 0.984565393988627 0 coding 1 0 1 1 -0.749475234570367 0.0271359549215769 -0.029830427731883 0.642913679014874 CGGGCCTGGGGCGGGTCCAGGGGGCGGGTCCTGGACCTTCAGATGCCCGCGACGGAAGGGCCTGTTTCAACATCCCCGGCTGTGGTCGGCCGCTGGCGGCGAGCCCCTACGTCTTACCACCGGGCTCCATCCCGAGAACTGACCGAGGCTGTGACTGTTTGGGAACCAGGCCCGCTCGGCGGCCGCAGCCCGGGCGACCCGCCTCTTTGCAACGGGTCGGACGCAACGCGGAGATGAGGAGCAGGAGCAATTCCGGGGTCCGCTTAGACGGATACGCGCGGCTGGTGCAGCAAACAATCCTCTGTTACCAGAATCCCATCACGGGGCTGATGTCAGCCAGTCATGAGCAGAAGGACGCCTGGGTACGGGATAACATCTACAGCATCCTGGCCGTGTGGGGCCTGGGCATGGCCTACCGCAAGAACGCCGACCGCGACGAGGACAAGGCCAAGGCCTACGAGCTGGAGCAGAATGTGGTGAAACTGATGCGAGGTCTTCTCCAGTGCATGATGAGACAGGTGGATAAAGTGGAGAGGTTCAAGCACACTCAGAGTACCGAGGACAGCCTGCACGCCAAGTACAACACTGCCACCTGCAGCACTGTGGTGGGCGACGACGAGTGGGGCCACCTCCAGGTGGATGCCACCTCCCTCTTCCTCCTGTTTCTGGCCCAGATGACAGCCTCCGGCTTACGTATTATTTTCACTCTTGACGAGGTGGCCTTCATACAGAATCTTGTTTTTTACATAGAAGCTGCATATAAAGTTGCTGATTATGGAATGTGGGAACGTGGAGATAAGACTAATCAGGGTATTCCAGAATTGAATGCAAGCTCTGTAGGAATGGCCAAGGCAGCCCTTGAAGCAATTGATGAACTGGACCTTTTTGGAGCCCATGGAGGTCGCAAGTCTGTGATCCACGTCCTGCCGGATGAGGTGGAACACTGCCAGTCTATTCTGTTCTCCATGCTGCCAAGAGCCTCGACGTCAAAAGAGATTGATGCTGGGCTTCTTTCCATTATTTCTTTCCCGGCCTTCGCGGTGGAAGATGTGAACCTTGTGAATGTGACAAAAAATGAAATTATTTCCAAGCTCCAGGGGCGTTATGGATGCTGTCGCTTCCTTCGAGATGGTTATAAAACCCCAAGAGAGGACCCAAACCGATTGCATTATGACCCTGCTGAACTCAAGCTCTTTGAAAACATTGAATGTGAATGGCCTGTGTTCTGGACTTATTTCATAATAGATGGAGTCTTCAATGGTGATGCCGTTCAGGTCCAAGAATACCGTGAAGCCCTGGAGGGGATACTGATCAGAGGCAATAACGGGGTCCACTTGTTGCCTGAACTCTACGCCATCCCACCTGACAAGGTGGATGAAGAGTATAAGAATCCTCACACGGTGGATAGAGTTCCCCTGGGGAAGGTGCCGCATCTGTGGGGTCAGTCCTTGTACATCCTCAGCTCCCTGTTGGCAGAGGGATTCCTTGCTGCTGGTGAAATTGATCCCTTGAACAGAAGATTTTCCACTTCAGTCAAACCTGATGTCGTCGTACAAGTGACTGTTCTGGCAGAAAACAACCACATTAAGGAGCTTCTGAGGAAACATGGGGTCAACGTCCAGAGTATCGCTGACATTCATCCAATCCGAGTCCAGCCAGGCCGCATCCTTAGTCACATATATGCCAAGCTTGGACGGAATAAGAATATGAGATTGAGTGGGCGACCGTATCGGCACATTGGTGTCCTTGGGACATCGAAACTATACGTGATTAGGAACCAGATCTTTACTTTCACGCCCCAGTTCACCGACCAGCATCACTTCTACCTGGCCCTGGACAATGAGATGATCGTAGAGATGCTGAGGATTGAGCTGGCCTACCTGTGCACCTGCTGGCGGATGACGGGCAGACCCACGCTCACCTTCCCCATCACGCATACCATGCTCACAAATGATGGCTCAGATATTCATTCCGCTGTTCTTGCTACAATTCGCAAACTAGAGGATGGATATTTTGGAGGAGCTAGAGTAAAATTAGGGAGTCTTTCGGAATTTCTCACCACCTCTTTCTACACGTATCTGACCTTCCTGGATCCAGACTGTGATGAGAAGTTGTTTGATGATGCCAGTGAAGGGACCTTCAGTCCTGATAGTGATTCAGACCTGGGAGGATATTTGGAAGACACCTATAATCAAGAAAGCCAGGACGAGCTTGACCAGTATATCAACCACCTTCTGCAAAGCACATCCTCGAAGTGCTATCTGCCACCTCTCTGTAAGAAGACAGAGGACAACCAGGTTTTCAGTGCTATCCATTCCACTCGGGATATACTTTCTGTGATGGCAAAAGCAAAGGGCTTGGAAATTCCATTTGTTCCCATGGCTTTGCCAACTAAAGTTCTAAGTGCCCACCGTAAATCGCTGAATCTCGTTGATTCTCCTCAGCCACTCCTAAAAAAGGCCCCTGAAGATGACTTCCAGTTTCCCAGAGATGACCATGGCGACGTGGACTGTGAGAAGCTGGTTGAGCAGTTGAAAGACTGTTCGAACCTACAGGACCAAGCAGACATTCTGTACATTCTGTATGTAATAAAGGGTCCCAGCTGGGACACAAATCTCTCTGGACAGCACGGGGTCACTGTTCACAACCTCCTCAGTGAGCTCTATGCGAAGGCCGGCTTGAACCAGGAGTGGGGCCTGATCCGCTACATCTCCGGCCTCCTCCGGAAGAAAGTGGAGGTCCTGGCTGAGGCGTGCACGGACCTGCTGTCACACCAGAAGCAGCTCACAGTGGGCCTGCCCCCAGAACCCCGGGAGAAGACCATCTCTGCGCCTCTTCCCCCCGAGGAGCTCACGAAGCTCATCTACGAAGCCAGCGGGCAGGACATCAGCATCGCCGTGCTCACACAGGAGATCGTGGTGTACCTGGCGATGTACGTCAGGGCACAGCCCAGCCTCTTCGTGGAGATGCTCCGGCTCCGAATTGGACTGATCATTCAGGTGATGGCCACGGAGCTGGCACGGAGCCTGAACTGTTCAGGAGAAGAAGCTTCTGAAAGTCTGATGAACCTCAGCCCTTTTGATATGAAAAATCTCCTGCACCACATCTTAAGTGGCAAAGAATTTGGTGTTGAAAGAAGCATGCGGCCCATTCACTCCTCCACACCTAGCCCTGCTGTCTCCATCCATGAGGTGGGCCACACTGGAGTCACCAAAACCGAGAGGAGCGGCATCAACAGGCTGAGGAGTGAGATGAAACAGATGACTAGGCGGTTTAGTGCTGATGAACAGAGGTCCAGCACCCCATCCTCACCCACGGGCACATCGTCATCAGACTCGGGCAGGCAGCACATGGGCTGGGGGGAACGGCAGGGCCAGTGGCTGCGCAGGAGAAGGCTGGACGGCGCCATCAACAGGGTCCCCGTGGGATTCTACCAGAAGGTGTGGAAGATCCTTCAGAAGTGCCATGGTCTGTCCATCGACGGTTACGTGCTCCCGTCCTCGACCACGCAAGAGATGACCCCGCAGGAGATCAAGTTTGCTGTCCACGTTGAGTCAGTGCTGAACCGAGTGCCACAACCCGAGTACCGGCAGCTGCTGGTGGAGGCCATCATGGTGCTGACGCTGCTCTCGGACACAGAGATGAACAGCATCGGGGGCATCATCCATGTGGACCAGATCGTGCACATGGCCAACCAGCTGTTCCTACAAGACCAGGTGTCAAGTGGAGCCACGGACACGCTGGAGAAAGACCAAGCCACAGGCATCTGCCACTTCTTTTACGACAGCGCTCCAAGCGGGGCTTATGGGACGATGACCTACCTAACGAAGGCGGTGGCTTCTCATTTGCAGGAACTGCTGCCCAATTCAGCATCTGGTCTCCTGGAGTCTGAGGACAGATTGGAAGTGGGTCTCTCAAGTGCAGAGTGAAGTGAAAAGGCAGCTTAAATCAGCTCTTGCGGAGTTCCCGAACAGGTTCCGTGAGCTAGTGACATATCTTCAAGATGGAAAGATCCTTCCAGCAGCTGCAAACCTTAACAAAGGGAACATCTTAACGGGTATGGTCTGTCTGTGGGTCAGATTGTTTACTGAATAGAACAGCTCTTTCTGTGGGGCCTGGTTTTCTCGTGCCTGGCTGGCTTTCTCAGCATCTTGTCCTATGGGCATGGCTATCTTCACACGACAATTCTCTCACCCAGATTTAGAAAATTGCTCCCACTTCACTTTGGCTCATGGTCTGGTCTTCAAGGATTTTATCTTAGCCACCCAAGGGTTTCTCCTGCCTTGTGAAAAATCCCACATCTTTCAATCTAACCAGAAAGAAAAAAGGCAGAGGGGGCGCCAGCTCTTCTTAGAGCTGGGCCAGCTGCAGGCAGGGGGTCTGTGCACAGGCCTGTGCCCCACGTCCACCCTCCCACATGGGCTGATGGCCAGCAGGGAGCAGCATGACCCCGTGTTCTGGGGAGCCATGTCGTGAGTCTGCAGCATCCACTGCCACAGAGATGCAAGATGTGCTCAGGCCTTTCTCCCAGCAGCACTTTCACCGTAAGGCCCTCAGGTGGCTGGGGCTGGAGGCCGTGAGTGCAAAAAAGCAAGTATGTGAAACCTTTCTCCACAGATTACTAGACGGTTCCTTCCGTCATTCATTGGCACGTGTGGGAAGCTGTGTCAGGTGTGGAAATACAAAAATACAGGAGACATGCCTCGGCACTCAGGGTGGGGGCAGTGGGACGGGGGGATAAGGTGCGAGACAGGAAGGTGAGACCACCCTGAGGCCTGCCATTGGTGCGGCAGATCCCAGAGACGGTGTGGGTAGGTGGGGCTGTACCCCGCTGAGCTCCCATGGTGCCCAGAGCCTTCCTCTCTCTGCCACTTTCCTTGGAAGCCTGTTTGCTCCCTTTTGCCTCAGAGGGTCCATGGTGGGGGTCACAGGCCCCACATTTCATAGGAGCATTTTCATAGCCTTTATTTTTGGTGTCTTTAACACATGCTTCCCTGGTGGCTCAGTCTGTAAAAAATCCGCCTGCAACGCGGCAGACCTGGCTTCAATCCCTGGGTCGGGAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTGGCCTGGAGAAGCCCATGGACGGAGGAGCCTGGCAGGCTATCCATAGGGTTGCAAAGAGTCAGACTTGACTGAGCAACTAAGCGCACACACACACACATGCTTAACATAAACAAGACTCGTGTCATTGACCAGGTAACCTCCCTGGTGGGTCATTTCAAACACAGAGAACGTAAAGGTACAAGCTGCTAAAGGCCCGGTCACCTCTCGGGCAAAGGCTCAGGAAGAGTTACAGCCTTCCAGAATGAGCCAGGTGCTAATTTAGAACCATCACCTGCCTGTGGATGACGTGCAAAGCCGCAGATGCTGTGTTTGGGCTCACCAACTGAGACGCGGCCAGGAGAAGAGCCATAATAAGCAATTCAACCGAGCCTTCGATTCACTCTTTTGAAACCTCTTTCAAATGAAATCCTGAAATAGTACTGCATTTCCACAGGCATCAAGCTGTCAGCTTCAAAGAACAGGCTTCTGAGGCTTGATCCCTTTCACAAGCAGCTGAGGCCCATGCCACCAAGAAGGGGAATAGATGTTGGAGCGGGATGGGAGAGGCCTGTCCTGCCACCATCCTGGCCTCAGTGGACAGGTTCCCACACCAGGTGCCTGGGGGGCTCGTTCTGCACACATAGTGGCAGTGGTTGCAAGGGTGCAGGGGTACTCTCCTCTCTCCTTCCTCAGAGCAGAGAGGCCAAGCTCAGACCTTTGCCATGGCTGGGGTTTAGCAGGGTCTGTGACAAATATTTCTTGTCACATCGTCAGCCAAAAAGCAGCTGGCCACCCACCTGCTGCTTGCTCTGGCCCTGACCCAGGGGACCCCAGCAACACGGAAGGCTCTGTCTCTGAGTCAGACGGACTAGCCTCCCAAGCCATCACCACCACCGGCAGCTCCGTGACGTGGGCCATTGTTTAGCCTCTGTGGGCCTCAGTCTGCCCATCTGGCAGCCAGGCAAGAGGCCCACAGACTAGCACGGGGCTCAGTGGGAGGGAGTGGCAGCTGCTCCCCCGCCTCCGGCTTCCCTGTGGCCGGGCTGGGGGAGCTGCGAGGGAGACTCCTGGGACATGTTGGTCCAGAGGTCGGTCAGAGCATTGGCAACTCTTCTGAGGTGCGGGGAATGGAAGGAGAGAGTGTTACACAATGACTGCCTGGGTAGAGAGGATGTAAATGCTCCTTATGTACAAAAAAGATCATGAGGCAAGAGAAACAGTTTGTCAGTTGATTGCTACCACTTATTTCTGGACAAGACAGGCAGCCAGGCCTGCCTTGATGTAAATTACAGCAGAGTATCAGTTCTGCTGACTTGCACGCAGGTCTGGCAAATCACTTTTGTCTCCCCTGCTTCCCTGTCAAAAGGTACAAAAGCCTCCCGCCCCCTCCCTCGGTACCATTATCTTTCAAGCTGATTCTTAGCTTTTGAAGCCCCTGCCATCTGTTCTGTACAGTTCTGCACTTTGCATGTTCCCACAATGCCTTCTGATAGCTCTGCTGGTATCAGAACAGTACAGTACAGCCACACTGCCACCTTCTTAGAGCCTGGGGTCCCCTTGTTCCTTCAAAGCTGTTTAGGAAAAGCCATATCCTCAAGTTACCAAGACACTTCTGAGGAACAAGACCACCTGAAACTGCAAGAAAGACTATTTTCAAACCAAATGCACACAGGGTTTGATGGTTTGAGGGGAAAATTCCATCAGAAAACAACCGTGTATGTTTTTAAGGAGCATATGTGCAATTTTGGCAAAAATGCCTTCTTAGAAGGATGGGAATCATTGGAACCAATGAACTCTGAAGTCACGATTCATCTCTCTGCCTTGTTGCAGTATGTCAACTATTATGAAAAACAAATTGCTCAAGAAGGCACTTACTGGGGGTGGTTATCACTGGACTGGTGCGGCAAGGATGAAAATATGCCAGTCGCGTTTGAGAAGACCCAAGGAGGCACATTGTCCAGCCTCCTGTGCTCCAGGACAGGACCACCTCCCAGCAGGGTGGCTGCCAGATGCCTGCAGCTGGCAAGACGGGCTTCACAAAGGGCACGGCCCTGAGCTCCATCTGAACTGGGCATGGGCAATGGTTGCACCTTCCTGTTTTCCTTTTTGGAAGACCTTTCCAGCTACACACCCAAGAGGGCACACTTGCCGAGGAGAATTCTTAGTCGCTGGCTCTGTTCTCCCATGGCCTCTGTGTCACCACTCACCACTCTGTCAGTTTTTAGTTGCAGATTACAAACAGCAACTCTAGCTGGGTAGGAAACGTGTGTCTTAAAGGATATTGGCTAAGTCACAAGATCACAAGATTTGGCAACTCCCCAGTCCTTCCCATGCTCACACCCTGTGACCTACACCATAGATGCCCCCAAAGCCGACCACTGTCCACTACAGCCAGGACCCTTGGCTCGTATGCCTCTGTCCAAAGAAGGACAGGTGCTCCCCCAGGAGCTCCCCCAGGAGGGTGCCTTTTTGAGGCTTGGGCGGCAGGAGTGAAGAGGGTGTGCACAGCAGGCAGCCCACCACCCCCTCTTCACTCAGGCTGGGCCAGTCCCAGGTTCTCTCCTAGTAGAAACGGTACTGAGGCAGGCAGGGTCGCTGCTGCTACCTGCACCACCTGCTGCCACTCAGCTGCCAAGGAGTGTGGCAAAGCTCCTGGCACACCCGCCTTTTCCGGGACTCTGAGTGACAGCCTGCCTGGGACAAGACGCAAATGATTGTCTCATCTTTCCTTCTAAGTCTTTAGCCAGCTGGGGGATTTAAAAATAAAGAGTTGGAACTGATTTGAAGTGTAAGCCTGTATCCTGACAGTGTGCATAAATTCCCCCAGCTGTCACAGAGCAGCCACCCCCCGGTTCTTTCAAGCATCTGAGCCACTGTCTCCTAGGCTACAGGGAGCCCGGCCATGGAGGTGAGTCGGCCTCTGGCGTCCCTCTCCCTCCCTCAGTGCCAGCTCCCGCCCAGTGCCCAGTGCTCTCTCCCTTATTAACCACAGAGCCCCATCTGGAGTGAAAACAGCCCAGCCGGCTTTGGTGGCCCTGGTGGCACGCACAGCACTGGAGCCCAAGTCTCCAGAAACGACTCTGGGCTTTTCACCCTCAAAGCAGTGAGCTGATGTAGGCTGCAGTGATCACACACACACCTACCCCATGCTTCTGTCCCTGGGTCCCGAGTGAGGCCAGAGATGGCTTCTGTGCTGTCAGCCCATGTTTATGTGGCTGGCGCTGTGCTTGGCAGGCTGTGGAATAGCCTAGTTAAAAGCAAGAGACAAAACAAGCAGGTCAGCAGGGAGAGGGGTCAAATCAGAGCTCAGAGCAAAGGTTCACTCTGAGCATGGCACCGGCGGAGGCTCTGCAGAACACACTCGCCACCCTTCACCAGGACCACCCTGTTTTCTCAAAGATGACGCCAGAGGAAGATGAGAGGGCAGCCCTGAATGCTCCCCTGGATGCCACAGGCCTCCCTCTCTGCGCAGTCAAGGAAGAATAAGATAGCCGCCAGGGAAATGTTCTGGGTGATAGGGCAAGAGCTTGTCAAGAGTGTAAGGATGTCATCTACTGACCAGTACTGGACCTTGGCCTACAGCTGGCCAAACCCTAGGGGGCTTAGGGGAGGGCTCGAGACCAAGCCCATCTCTCTGTCTCCATGGAGCTTGGCCAGCAGGGCGGAGAGTCCTCCTTCCTGTCCTGGCTCAGACAATAAACCAATGAGCAAAGATGCATAATTTGTTGGGATGATAAGAGGCTGTCCTATGGGATGAGC EMBV3_02147 TCTCCCATGGGTAGGATGGAAGGCAGCCTTTCTCCCAAGCTGGAGGATGATGAAGAATAA Gene GeneID:540119|MCHR1:NM_001103292:201_cdna Constitutive 0 NULL GeneID:540119 5 GENE MCHR1 MGC159878 melanin-concentrating hormone receptor 1 EMBV3_11002 TCTGTCCCGGTCGTCAGTGATGTGCGAGAGCTGCTGGAAGACCCCCTCCCTGCACCCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15173 GGTCACGATTGTACTTTCAGCACTGGGTGGTCTAATAAATGTGAACTTCAACTAAAAGTG Gene BVT0102_384535 + 0 NULL GK000004.2:32858260-32966205 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183640 1 XLOC_111186 Coding TCONS_00183640 XLOC_111186 NonCoding Coding - 4:32928767-32929950 - TSS136958 1183 2 TCONS_00183640_2 37 0.303465765004227 1 0 0 0 0 0 0 0 0 0 3.04516937970627e-53 0 1.93506697776883e-06 3.02255661213414e-06 0 6.95856925489395e-05 0 0 0 2.12095316307703e-05 1.81849412211886e-05 0 0 1.56818898966422e-06 0 0.000425139880708731 0 0 0 0.00017050567818828 0 0 XM_005216047.1 NLRX1 PREDICTED: Bos taurus NLR family member X1 (NLRX1), transcript 4e-51 206 82.03 0.182586644125106 0 noncoding 0 0 0 0 -0.0173905336377685 0.903967332351272 0.0406723329212825 0.474199550237658 TGCTCTTAATTCCATCTACCAGTGTTCTAAGCCTTATATTAAAAATGCGGGTGGAAGAAGAACGCAAAACCTTTGTATTCTGCTTCAAAAGATGGCAAAATTACTAGGATAAAAAAGCCTGTAAGTCAAATTCAGTTTTCAGATTTCTGGTGAACCTGATTATCTTCATTTTCTTTGTTGGTTTGGGAAATTAAGAATTGGCTAAGTTTTATGGTATAAACTGTGGTATGGTTTAGAAGTTTGTGATAAGTTCCTTACCAGTGAACAAGACATTGTCAGCACCAAAGGATAATGATTACATGTTATAGATTGGTAATGATTACATTTTATAGATTGGTAACTGTGATTCATAGTTGCTGAATGATTTACTTGAGGCATCTTATAAGTAACATAGAGCTAGCGGTGTAAGTACAGTTGAGTATCTCATCTAGACTCAGAGTTATTCACATCAGCTGGAAGTGTAATTAAAGTTAGTTTAAGTGTTTATATTCTTTTTTTTTTAGAACATTAACATGAAACTTTATCTAGAAAATTAAGGTCACGATTGTACTTTCAGCACTGGGTGGTCTAATAAATGTGAACTTCAACTAAAAGTGCTTTTTTTTTAAAGGACAAGATTCTGATCTTTTTCAGAAATGGGAATTTTCTCTCTTAGAAAAATTTAAACTAATTTTCGTAAGTTAGCAGGAAGAAATGTAAGATTCCTGCTTCCCCGGCAACTCAGTGGTAAAGAGTCCGCCTGCAGTGCAAGAGACACAGGAGACGTGGGTTCAATCGCTGAGTTGGGAAGATCCCCCCAGTAGGGGGAAATGGCAACTCACTCCAGTGTTCTTGCCAGGAAAATCCCATGGACAAAGGAGCCTGTGGTGGGCTACGGTCCCATAGGGTCACAAAGAGTCGGACACGTCTGAAGCAACTACACACGCACACACACACTATAGAATTGACAGTGCAAAGTTAAACAATCTAAATATATTGGCAACAATATAAATCCACGAGTAATTAGTTTCCTTGAAGTATCTGAAACTTTTGCAGTGGTATTTTGTTGTTGAGTTGCTCAGTCGTGCTTGTTGTGACCCCATGGACTCTAGCACGCCAGGCTTCCCTGTCCTTCACTGTCTCCCAAAGTTTGCTCAAACTCATGTCCATTGAGTCAGTGATGCCATCCAACCATCTCATCTTC TCONS_00183619 TCONS_00183634 s 5' 13486 TCONS_00183619 TCONS_00183634 s 5' 14668 EMBV3_19482 GGCCCAGGAGACACAGGCCCGCGTGTCCAAGGAGCGTGCCGAGGCCTGGCGCCAGAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17533 GTGCTTGTCATAGCTGAAAGATTTCTGGTGGCTTAAAGCTTACTAGCACTTTACTCAATG Gene BVV0101_057760 + 0 NULL GK000029.2:26373537-26390465 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163360 TCONS_00163359 TCONS_00163361 1 XLOC_099859 Coding TCONS_00163361 XLOC_099859 Coding Coding SPTY2D1 29:26356706-26375993 = TSS122428 5392 1 TCONS_00163361_6 681 6 0.720730063258322 0.000708494894595306 0.000392573536563044 0.000687550750796619 0.00035404593524597 0.00111407321449945 0.000120836752613808 0.000132383846895535 0.000404997107157122 0.00060946914787423 0.00105008947223499 0.000577880161500527 0.00030540684455213 0.000126901882124304 0.000582451065780689 0.000449851215589206 0.00298542535168801 0.00196526283083713 0.00394836990816993 0.000358156844094102 0.000790072030364587 0.000236264534653304 0.00282612634254065 0.000977118918877249 0.0021517741524404 0.00105386455386092 0.000454416298055768 0.000332126785619475 0.000512222854745665 0.00022966017787452 0.000344617344182031 NM_001205738.1 SPTY2D1 Bos taurus SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) (SPTY2D1), mRNA. 0.0 4776 100.00 0.490912462908012 NM_194285.2 SPTY2D1 Homo sapiens SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) (SPTY2D1), mRNA. 0.0 3984 83.71 0.699554896142433 TCONS_00163361_6 sp|Q68D10|SPT2_HUMAN SPT2_HUMAN Protein SPT2 homolog; 0.0 943 83.58 0.96769456681351 1 coding 0 0 0 0 -0.0653723847666491 0.741910461695717 0.0246744183402572 0.627731161335364 AAGGATACTGGCCTCTGGAGGAAAGTGGGCGGGCAGACGGCATTGGAAAGCGCCGGAAGTGGTCGTGCAGAGGAGGGGTGGGAGAGAGGCTGGCCAGACAGATCATTAGGCTGTTGCTGGTCGCCTCGGTAAGGCGCGCTTTCCCTCCTCTCCGAGAGGCTGGCCCAGTCCTCCTCCTCGACCAGAATGGACTTTAGGGAAATTCTCCTGATAGCTTCCAAAGCGCAGGGTGTCAACAACGTGCCGAAAAGATACAGTTTGGCAGTGGGACCTCCCAAAAAAGACCCAAAAGTTAAGGGTGTCCAGTCAGCAGCTGTCCAGGCTTTTCTCAGAAGGAAAGAAGAGGAGCTCAGACGAAAAGCCTTAGAAGAGAAGAGGAGAAAGGAAGAACTAGTGAAAAAGCGAATTGAGCTAAAACATGACAAGAAAGCAAGAGCTATGGCCAAGAGGACAAAGGATAATTTCCACGGTTACAATGGGATTCCTGTTGAGGAAAAGTCAAGGAAGAGGCAGGCAATGCAAAGTCACACTAGCCAGGGAACAGACCAAGAGTACGAGATGGAAGAAGAGGATGAATTCTTAGAATACAATCAAGCAGAGTCAGAGCAGGAGTACGAGGAAGAACAAGAACCTCCCAAAGTTGAAAGCAAACCAAAGGTCCCCCTTAAAAGTGCCCCACCAGTCATGAACTTCAATGATCTGCTCAGGCTGGCTGAGAAAAAGCAGTATGAGCCAGTGGAGATAAAGGTAGTGAAGAAGACAGAAGAGCGGCCCATGACTGCAGAAGAACTTAGGGAGCGAGAATTCCTTGAACGAAAGCGGAGGAAAAGGACACCTGAGACAGATGCAAGACTACCGCCAACCAGAAGAGTACCCTCTCAGAAAGAGGGTGTGGGCACAAAGCTTAGCAGAGGCTCTGGAGACATGCATCCTCCTTGCAAGGGTACTGTCCTTCCTCATCCTGAGAAGAAACCCAGACCCAGCCCAGCTGATGAGAAACGCCTGCATTTGTCTTCGTCCAAATCCGTGCCAGGGGAGAGGACCAAAGTAGCCCCTGGCAGTTGCTCCCAATCCTCGCTTCATGAGGGCCGTGATAGACCTGTTTTCAATGGGGCTGGAAAGCCCCACCCCAGCACCTATTCACCAAGTGTCCCAAAGACTTCTGCTAAAGGGCCTCAGAAATCTGCTACCGAGCACAAAGCCAAAAAATCTCCTCCCCATCCTAGCCATTCCAGGCCTGGACCCATGGCCACTCCACACAATAAGGCCAAGAGTCCAGGTGTCAGGCCGCCAGGCAGCAGCTCCAGCTCAGCCCCTGGGCGGCCTAGTACAGGGACTGCCCGGCCCACGGTTAGTTCTGGCCCCATGCCCAAGCGCCAGAATGGCAGCTCCAACTCAGGACCCGAGCGATCAGTCAGTGGGAACAGGAAGCTAACCAGTGACTTCAGTCCCCCAGGACGGACAGTCAGTGGTACAAGTGGCCTTGGTCGACCTGCCAGCAGCTCAGGTGGCCCTGGGCGACCTGTCAGTGGCTCCAGTGGTTCTGGGCGACCCGTGGGCAGCTCTGGGGGCCCTGGGCGGCCTGTAAGCAGTCTACATGACCATCGACGACCAATGAGTGGCTCAGGCCCCCCTGGGCGGTCAATCAGTGGCCCTGGCCGGTCAGTCAGTGGCCCAGCTCCAGCTGGACGACCTGTCAGCAGTTCAGGCCCTGGTAGACCAGTGAGCAGCTTGGGACCCGGGCGAACAGTTAATACCTCAGGTCCCCCTCTGAAGCCCAAATGCACTGTTGTCTCAGAAACAATTTCTTCCAAGAATATAATCAGCCGACCCAGCAATGGACAGATGAATGGAATGAAGCCATCCTTATCTGGCTACAGATCTGGTCCTCAAAGGCTTCCCTTTCCTAGTGGTTACAAAAGGCAGCGAGAATATGAAGAGGAGGAAGATGATGAAGAAGAATATGACTCTGAAATGGAAGACTTTATTGAAGATGAAGGAGAACCTCAGGAAGAAATATCCAAGCACATTAGAGAAATCTTTGGCTATGACCGAAAAAAATACAAAGATGAAAGCGATTATGCCTTACGTTACATGGAGAGTAGTTGGAAGGAGCAGCAGAAAGAAGAAGCAAAGAGCTTAAGATTAGGTATGCAAGAAGATTTAGAGGAAATGAGACGTGAAGAAGAAGAAATGAGACGTCGAAAGGCCAAAAAGCTGAAGAAGCGTTAGCTGCTGCTTGTATTTTTGTGAACTTCTGAAGACTGCTGCAAGGAAGTCCTGCCTTCAGACTGAAGAAGCCCCTTACCATTTTAGAATTCTAGTTGGGTACTCAAGGAGAAGGAATGCATACTGTCATCTATCTGCAGGCTGTCGTTAGAGCATAAAGTATTTTCACATACTTTGCAGGGTGAAATCATAATGCAGATGACATAATACCCAGTGAGTGCTCTTACGAAGTTAACTATTCACAGGAGCCAGCCTTGATCCTCATGAGCTATGCACTCTCATGTGGGGCCGCTCACAATTCAGCCAATCTTGTATTATTCCTTTGCTACTCTCAAAAGGAAAAGAAAGGATTGTTCCTTTACTTCCATAATTCTGCTGATGTGTGAGTATGGCGCTGCCTGGCTCCCAATCAGATTTGTCTTTTGATGAGGAACCTGGCCCTTCCAGGAATGCTGCCAGCAATAAAGTGACCAGTCCTAATCTCTATGTTTGGATTGAGAACTTGAAAATGTAGAGTAGGTGTTATAATTATATGGATGTCATTTCTGTGACTTTGAAAGTAAAAAGTAGAATAAATTGTATTCTGCATTATTCATGAATTGGATGCTGAGCATTCTTATTCACTAATTTAGGTGATTAGGCAATTAACAGAATTTTCCAAGTTAAAATACAAGTTATGCCATTTTTGTTTAAGAGTATTCTCTTCCAGATTTTACTTTCAGATTTACTGTTTTGTTGGTGTAAAATAGACAAGGTCACTGTGCTGTTTGATTTTTATCTAAAAATTTCATTTTTATATTGAAGAAAAAATACTTATTTTATTCAAACATTAGATTTGGAAGAGTAATAGTTTCAAACTTAAGGAAGTGACATGTGAGGCTCCCCTCCGCCTCATTCCACTCCCCATTGTAAGGATATTTTGGAATTCAAGGTGCCCTTTACCTTTTTGTGTTAATGACTCTATTTTTATCTTAAATTCTTTAGCGATTAATGGTAAAAAACCAAAAACTAAATTCATGTGTATCAAGGCCACCACTTTCTCTTTTTGCCCATGTTGCACTTTTATTTCAAACTATGCACTGTGAAGAGATTTTATCCCAGGTAGAAGAGGATGTTCCCTGTTCCTGTGCTTACTAGGCTGTGGAACATCTTCATTCTTACCTTTCTTCAAGTCGTATCTGTAGACTTGTTATATCTCTTAAGCCTCAAGTCCAAGCAATTCCAATCAGGCTGACCTAGGTTCTGGCTGGAGAGAAGCCAAGTCTCAAGGAAGGTCAGCAATAGAAAATGAGGTGTGATGATGCCAGAGAGCATGTGTCCCTGACTCTGAGTGGAGGACTGGGGACAATGGGACATAAGCTTGTAGAAAATTCTATAATAAACCTTGTGGCTGTCCTAAGCCATCCGTCAGTGGGGATCAGGAAGTAGGAGAGGTTATCCTACAAGAAGATTTACTCTTCAAAAGATCTGAAAGTTGTTTTTTTTTTTTATCTATAGAGCTTGCTTTTTCTCTACGATGGGGTGTTATAGATAACCACTATTAGTGATCACATATAACTGTTGAAACACTGGTGGCAGAAAAGCCTGTAGACTGCCTCTCACCTATCTCCAATACCTTTAATGATTCAAGAGTAGTGTGATATTCCATGTAATAAAACAGGTTTGGAACATTATTTCCTTTGCTGTCCCTTATGTGATTTTTTTTTCTGCTTCACAAGTTTGCTTGAATATAATATACATTTTAATATTCAGACTCTGAAATATGTAATTACAATCAAGTGCTTGTCATAGCTGAAAGATTTCTGGTGGCTTAAAGCTTACTAGCACTTTACTCAATGATATTGTACAGTAACTTGTACAGAAAGGCACCATTATGCTAGCTAAAATTTACAGAACTTGGTAGAAAAGGTCCTTATGTGTAATCACTCGGGTTGCATTCTGCTATGATACAGATGTTGATTTCAGTTTTCCTCAGCATCAACATTATAAAAGCACTTCTGTATGTAGCTCATGAAAAGAAAAAAAAAAAGGTTCTGAATCTTTTAATCTTGGCCTTGTTTCCAAATCCTGTCTTCCACTTTGTTCTGTAACTCCTGACCACTCTTAAACAGCTCACAAATCTTTAAAGAAACTGGAATAGGCTGTTATTTTATCAAGGTTTACAAATTAAGTGCTTGATTTTTAATGTGTCTATCCTCTTTTGATTTTCAGATTTTATTAATATTTGAAGATGTGCCTTTTATTGGGTAATGTTAAGTCATGAATGTAGTAATGTTATTTCACTATTGTAATAATATTACATGATCATGGATGCAGCATTCTCAAACACGATGTGAAGGGAAAGTAGTTTTCATAAAACTCAGTAGAGCTCTGATTGCACAGTCCCACTTGCTTTAGACGTTGCTGTTAAAGCAGGGGGCACTTTTTCTTTAAAAGCTACTTTCAGAACTTGTCTTTGTATTTTCTCTAAACTACAAATGCAATTATGTCCATTTGGAGGCCAGGGTACCACATGTCACAGGCAGCCTTACATGTGTGCCGTGAGAAGGTTCAAAGACTGTTATCAAGAAAGTCTATGGGAACTCGAAATTTCATTTTTTAATGTAATCCCTAAGATCTTCTCCAAGAAATAAATTACTGTTTTGTATTTTATAATTTAAAAGCAGCTATTAGTACACTTCTGAGATATAACAGGAGACCAAAACATGTTTGGAAAGAGAATAAATATATAGAGACTGGTTATTTTATTTTCAATGTGCTGAATATATTAGACTATTTATTTTGTGAGTGGATGTGATGAAATATTCAGGTGTTAGTGTATGATTAAGAGTGGGATATAGACTTCTTTGAAGTTATTAAATCCATGTCTTTTACATAATGGACAAATCAAGTTTAAAGAAACATTTACATAACATAGCTTGTTTTCTGGTGCTGTTGACCTGCAAGAGAATCTACTTTTGCATATACAGATAAAAGTTTTGCAATTATGTATAAAAGAAATTGTAGGCATTAAAAATATTTTATTGATATTTTCACTGGTTTGCATTTATTTAACAAAACTCATATTCCTTATTTCATCACCCTGAATATTATTCCAGCTAGAAACCCCAGCAGACTCATCAGACTTAGAGATGGGTTTACCTCCTTACACACACACTCACAC EMBV3_33056 GAAGAATGCCGTTTTTCAGAGAGCTGTTGACCTTTAACATACACAGGGCATGTACAACCA Gene BVV0102_271635 + 0 NULL GK000006.2:20752927-20760801 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204680 TCONS_00204681 TCONS_00204679 1 XLOC_124500 Coding TCONS_00204680 XLOC_124500 Coding Coding ARHGEF38 6:20757702-20785953 j TSS153064 4678 1 TCONS_00204680_4 405 0.103463018383925 8 0.834690265486726 0.000757425351569531 0.000512121027353333 0.000432007302434152 0.000259175463043419 0.000399368255242697 7.11198360819585e-05 0.000240686265776844 0.000603339895381428 0.000367676456181493 1.79103890333725e-07 8.5877562638616e-06 2.10436351374762e-05 1.31748014765755e-05 0.000326656281247044 2.04281138363926e-07 1.1530886138074e-06 0 1.07672320136729e-06 0.000324058330064597 0.000633907226908808 8.44204680417071e-05 3.1628429478885e-07 4.05147873863915e-07 8.13681301596065e-07 0.000382088566445052 0.000217890514501822 0.000475166910816639 2.17624621401729e-11 2.15847841560333e-07 2.63913437714876e-07 XM_870734.5 ARHGEF38 PREDICTED: Bos taurus Rho guanine nucleotide exchange factor (GEF) 38 (ARHGEF38), mRNA. 0.0 2951 100.00 0.349508336896109 NM_001242729.1 ARHGEF38 Homo sapiens Rho guanine nucleotide exchange factor (GEF) 38 (ARHGEF38), transcript variant 1, mRNA. 0.0 2055 81.42 0.455964087216759 TCONS_00204680_4 sp|Q6XZF7|DNMBP_HUMAN DNMBP_HUMAN Dynamin-binding protein; 2e-49 183 40.45 0.585185185185185 4 coding 0 0 0 0 -0.0057693351702871 0.963027200693056 0.0312113540673554 0.684695687457262 CTCGATCATTCCAAGGCCAGGTACCAGGCAACCAGAACCACTTCTATAGCCCAAAGCCTGCTGGAATTATTCAAACTGGCTAGTTCTAAACATTTTACCCTGCCCCAGCTCCTTCTCTGTGATTTCTCACAGAAACTCCAATAAAGACTCTAGCCTTGACTTTTCCCTTGCTCCTTCCTGCCAAATGACGCAATCTCACTGATTCCCCTGTGATCCTGCATGACATACGGTGACCACTTCTCTAGGACCTGTGAAAGACAATACCTTTAACAGAGAAGAAAAGCTATTTCGATCTTTAGAAAAGACTGTGAGGCACTGTGTGAAGAACATTTCATCCTGTCTCCAACACATACAGGATGCCATGCCTTTAGCTCTGCAGAACATGATGGAGCTCCAGGAGATTTCACACAACAAAGATGAGGAGGAGAGCAGCTATTCAGAGTCTCCAAGTAATGCCCCAAATCCCTCTGAAGACTTTGCAGCTCATTTGCAGAAGCTCGTCCTGACGCCCCTGTCAGCCCTGCTGTCCCTGTTCCCAGGGCCTCAGAAGCTAATCCAGAAACGCTATGACAAACTGCTGGACTATAACAGCTACTTGCAGCGGGCGGCGGCGGATGAGTCAGACTTGGCCAAAAGGGAATATGAGGCCCTCAATGCCCAACTGGTGGAAGAGCTCCAGGTGTTCAATCTGGCCGCGCGGAAGATCCTCCTCAATTGTCTGTGCAGTTTCGTCACCCTGCTCAGGGACCTGATGATCGTGGCCCAGCGGGTTCACACCACCACGGTGCCGGTACCACAGTTGGCTTCAAGCATCTCTGAAATTCAGAATCGAGTACTAGAAGAGGTTCAAAACCTGAATTTTGTAAAGGATAACAGTGCTACCTTTATTGAGAGGAAACTTAGTTTTGAAAAGAAGAAGCCTGTGCAAACTCTGCCAGAAGTGCCACGCCAGACGGACACTCACCGCTCCAAACTTCTATCCACATACAGCACAGAGGAACTCTACCAAGCTAAGCGCAAGTGCAATGCCACCCAAGAATATGACATCAATCTTCTGGAAGGGGAGTTGGTGGCTGTGATCGAACAAAAAGATCCACTGGGGAGTACCAGCAGGTGGCTTGTTGACACAGGAATTATAAAAGGATATGTGTATTCCTCCTTCCTAAAACCCTACAATCCAGCAAGAGTGCAGAAGGTGGATGCTGAGAACAGGTTCTGCGATGATGATTTTGATAACATCAGCCTCTTTGTGTCTTCACGGCCAGCCAGGGACAGTGTCGCAGGCACCCCAGAAGGTAGCATAAGTGGTAGCAGCTCATCTCTTAGTGGAACATGTGGGAAGTCTGAAACAAATGGTACCGATGCTGACAGTCTTCAAGAGGCAGATGAACAGATTTTCTATGCGGTTCATGCCTTTCAAGCACGGAGTGACCATGAACTTAGCCTTCAGGAATACCAAAGAGTTCATATACTTAGATTTTGTGACCTAAGTGGTAATAAAGAGTGGTGGTTAGCTGAAGTTCAAGGACAGAAAGGCTATGTTCCAGCTAACTACCTTGGGAAGATGACTTATGCTTAAGAAAATAAGCCTTTGACTTTCATTTTCTGGCAAGTTGTTGATTGACTACCTCATAAAACTGCCATTACAACATGTTGGCCTAGAAATCAAGAAACCTCCAAACTATTAATTTAAGAGCTGACACCATTTCAGATTTTAAGGAAGACTATGCTTCCAAACAAGATTATTTCAAAATGTACAATTAGGAATGCATGTTGAAGGAAACACCAAACACACAGAACGGCGAAACAAACAGCCAAAGCTCCAACTATCAACTCCTTAAAAGTGATCTTCCGAAAGGGTAAATGTATTCTTTATCATCATGAAAGGCTGGGTCTAAGGATAAAGGTTTTTCAATTTACTGTATTTTATTTTTCTGTATTATATATTTTGCCTTAAATGTTTTTGTTTTTATATTTTTCTCTTTTGAACACGCATGCATGTATATACCTACACACACATATATACCATAACATTACATGGTTTTACACACATGTATGTGTACTATGTGGTACAGATTATACATATATATGCATGAACAAGGGAGTGTACTAAAAAGACATAAGAACAGAAATCGATTACTTAATTATGTGACTCTCTCTTTAGTGGAAGTTTTGAATTTAAAAGAACCCTGACTAACATAATGGTAATATCTAACATTTACTGAATGCATATCAAGTGCCAGACATTATTATAAATGCTTTATATGTGGTAAATTATTTGATACTCAAAACATTATGAGGAAACTATGGCCTAAATAGATGAAATAATTTATTTAGCCCAAGTTACATTGCTAGTAAGTGGCAGGGCTGAAATTCAAACCTAGATCTAGTTATAGAGGTCCATACCCATAAACATTACATGGTATATATTTACTATCAGCAAAGAACATAGTGATAAAAATAATCAATGCTGATGAGGACCATGTTCCTCTTAGGTCCATATTTAAGTATTGAGAAATTTTTCAAAATCAAGGGCTATTGGAACTTCCATGATTAGCTTAGAGAATAGGAAGTACCTAAGTTTATTATTTTTATTTTTTGCTTAAACATTGTTGAAAGTGAAATTGTTTAAAAACTATCCAATATGATCACTAACGATACTTTAATGAGAAAATATTTTTGGATCATTCAATCATGTAGATGATGAATGAGGAATATGTGTTCCGTGTTCTGAGCCAAGATGTAAATATTCTTAGTTGCTGATTTGTACTTAGACAAGGCAGGCATTGAGGATAGCACTTGCTGTAACACAATGTCCCGGGACACTGAACTTTCATTTAGGAATAGCTCAGAACTGTCCTCTAAGATTTCAGGCATGTTTTGTCTCAAGACATTTTATTGAACGAAAGATGTTGCTTTGGAATAGAAATAAAGATTGAATTTGACTAAGTGGTTTCTTTTAAAAACCAAACTAAGGTAGATTTTCATTGTCCATATAAAATGTGTTAATATATTAAATTTTAAAATTTTAAAGTTAAAATTACTCTCAAAGATTTGATCTCAATAATACATATTATTACATCTATTACTGAGGAATACAAAAAAATGAAGAATGCCGTTTTTCAGAGAGCTGTTGACCTTTAACATACACAGGGCATGTACAACCATAGAAATTCATGAGAAGACATTACATGACAGAAAAATTTATATTTTATGATATTGTTTCTAAAATTCTTAAACAAGGTTTATCACGTTCTATTTATAAGTTGTTTCTGCATAAAACTTTGAGTCGGGTACCAAAAGATGGATGTACAGCAACTTTTTGTCTTTTAAAGGGTCCTTTGTATTCAATAGTGAAACATAAGTAAATTCCAGTTTGCTTAGGATAAAGCAAAAGGAAATCCAAACTTGTAACTTGTGGCATATCATGAATCTACCAACAACTAGTGAGGAATTTTTATATAAATTAGCTGTGACCTAAATACTCCTCCCTGAAATGAAGAATTATATAAACAACACATATCTGGTTTTCTGGCTGAAATAAGTGACTAGATGTAGATGTATAGGAGAAGTTCTGTCTACCTGTGTAGTCCTAAGATTGATGCTTCCTGTCTGACCTTAGAAGAAACCACACCACTGAAATCACAGCTGCAGTTAGTAACTGAGCAAGACTTCCAGTGAAGCCACCTTCTGCAGTTCCCCACTATTGTGGCAAATATGCATTACTATAAAGCAATGCTGTTGCTATTTTAAAAATACGACCTACATTTCATATGCTATTTAGGCTTTTTAAAAAAAATTATACAATATATACATTTTAAAAGTATATTATTTAAAATCAAGTAATTGTAATTTTTTAGTCAGGCATTATTTTGTTGGGTCTAAGGGAAATAAAATCCCATATGTGTGTAAGTCTTCAAGAAGTTTAAAAAGATAGGCCTGTTGGTGACATCCCTGCATATAAGGAAAGGAATGCTAATGTAATTCTGTTCTTTCTTTATGTCTTTAAAATCAAATGTTATTATATAGTAGACAATTCTCTGAAATAGGTATTTTTACTAAGAATGAAGGGGAAATTTTTGTGGCTGTTTTTCTTTATGAAACAAATAAACAGGTGTATGTATACACTTTATTTAGTATTTATTTTTAAATACAGATGCCTTAAGCAATATACATAATAAAGTTTAGAAATTATATTTTAAACTCTAGTAATACAAAGTTGCCATGGGTGCTTAAATCATGTGAAAGAGTCACAAAGCCACTATGTGAACATTTCTTGTATTTTAGAAAAATATCTGGTCTTAGTATTTATTAATAAAACATTTCTATGAAGGAAGAATTGTGCAGAAGAAATGTCATGCACATTGTTAGTCATATAAATGCAGCATTGCATGAACAGTTTTAAGTACTGGTATATTGCATATCTTCCCTAAAATATAACTTGGACTTTTAGAAATAATGGCTATTAAGTGCCTGTCACTATTTGTGATGAATATTTAGATAATTTACAAACATTTAGTAAACATGGAATTAAAAACTCTCCATTTTTCCATCAACTTCTTTGACTTCTGTCAATGGCAAAAACCTCTCAAAGTTATTGTGAATTAAAGAGAGGAAATCTTTATATCCTAAGATGGCAAAACCACTTTATTTAGATCCTATTTGTCAAAACTATATG EMBV3_16431 ATGTGGATCCGCTTGGCCCTCAAATAGAAAGACCCAAAACAGCAGCCAATAAGAGAATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25905 TCTCCACCCCAAACGCTTCCTGAAGTCAGATCCATGCCTTTCCCTGTGAAGAATAAGCTC Gene GeneID:281038|CASR:NM_174002:8_cdna UTR3_Alt 2 NULL GeneID:281038 1 GENE CASR NULL calcium-sensing receptor EMBV3_10553 GCACGGTCTGTAGTGTCTCACGGTCCTCTTGGACGTCTTCTGCATGTTTCAAGCAGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10528 CTGTAAAACTCGGGTCTTTCTGGTGGAGAGCTGGTTTCATATCTGTGGCCTGACGGGGAT Gene BVT0102_157487 + 0 NULL GK000007.2:71800189-72394109 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36326 AGATCAGGTTTTGTGAAAAGGTCGCCATGCTGGCTATCAGTGGGGATTCTCTTGGAGGTG Gene BVV0102_031159 + 0 NULL GK000005.2:75267777-75279134 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195583 1 XLOC_118090 Coding TCONS_00195583 XLOC_118090 Coding Coding FOXRED2 5:75274569-75293227 j TSS145722 6759 1 TCONS_00195583_4 690 0.190708684716674 9 0.638205499276411 0.000118927690634812 0.000317120290785397 0.000249336579050545 0.000283795619438495 0.00019347681010014 1.331807138044e-05 4.65361672913003e-05 0.000217458899486091 9.58779209465479e-05 0.000184753511156022 6.02863322038611e-05 1.44308467088631e-05 4.83737226589946e-05 0.000261977223912141 0.000132672186978195 0.00864207854437932 0.000878950366187557 0.00724130284525299 0.000169835827791698 0.000383031942076866 0.000277118355627205 0.0018555160683349 0.00205700068562566 0.00292597650419626 0.000319652641526886 0.000189192002754041 0.000131035610745689 7.53179843575566e-05 0.000250666866591788 0.000817021153890723 XM_005206839.1 FOXRED2 PREDICTED: Bos taurus FAD-dependent oxidoreductase domain containing 2 (FOXRED2), transcript variant X1, mRNA. 0.0 8419 100.00 0.690486758396212 NM_001102371.1 FOXRED2 Homo sapiens FAD-dependent oxidoreductase domain containing 2 (FOXRED2), transcript variant 2, mRNA. 0.0 2313 79.42 0.386299748483503 TCONS_00195583_4 sp|Q8IWF2|FXRD2_HUMAN FXRD2_HUMAN FAD-dependent oxidoreductase domain-containing protein 2; 0.0 1175 82.49 0.998550724637681 4 coding 0 0 0 0 -0.171617653539107 0.15191505767847 0.0140213736824466 0.794750715956347 CGCGGAGGCGCGGGCCGGCCGATTGAGGCCTGACTCGGCTGCGGGCTGTCTCCGGAGCGGCTGGGAGGATGGGCCTCTCCACCGTCGCCCCGCTGTGGGGCGCCCCGGGGCTGCTCCTGACCATCGCCCTGCACCTGGCTCTCTACCTGCGCCCTGCCCAGGCCTGGGCGCCCGTGCATCGGGACTACTGCGTCCTGGGCGCCGGGCCCGCGGGCTTGCAGATGGCCTACTTCCTGCAAAGGGCAGGCAGAGACTACATGGTATTCGAACGCGCCCCAGTGCCGGGCAGCTTCTTCACGCGCTACCCCCGGCACCGCAAGCTCATCAGCATCAACAAGCGGTACACCGGCAAGACCAATGCCGAGTTCAACCTGCGTCACGACTGGAACTCTCTGCTCAGCCACGACCCCCGGCTGCTCTTCAGACACTACTCGGACGCTTACTATCCCGACGCCAACGACATGGTGCGCTACCTGAGCGACTTTGCAGAGCGGCTGGGGCTTCACGTGCTGTATAACACAACCATTGCCCACGTCACTGTGAACAAGGATCGCGGGGCCTGGAATGGCCATTACTTCATCCTGACCGACCACCGGGGCCAGGCATACCAGTGTAGCGTCCTTCTTGTGGCCACTGGCTTGTCGGTCCCCAACCAGGTGGACTTCCCTGGCTCCGAATATGTGGATGGGTATGAGTCCGTGTCTGTGGATCCCAAGGACTTCGAGGGTCAGAATGTGCTGATCCTAGGCCGGGGGAACTCGGCCTTTGAGACAGCAGAGAACATCTTCAGTGTCACCAACTTTATCCATATGCTGAGCCGCTCCCGGGTCCGGCTCTCCTGGGCCACCCACTACGTCGGAGACCTCAGGGCCATCAACAATGGCCTGCTGGACACCTATCAGCTTAAGTCCCTGGACGGGTTGCTCGAGTCCGACCTGACAGACTTGGCCATCGTGAAAGACCACAAGGGCAAGTTTCACATCACTCTGAAGCTCTTCATGGAGGAGTTCTTCAACCAGAGTTCCGACGCCATCCCCCTCCCCCAGGACAACAATGACAACTTTGCCATGCGCGTGGCCTATGACCGGGTCATCCGCTGCCTGGGCTGGAAGTTTGACTTCTCCATTTTCAGCAAGTCACTCCGACTCTCTTCAGGGAGTGAACTCAGCGAGAAATACCCCCTGGTCAGAGCCAGCTATGAATCCAAAGGGAGCCGGGGCCTCTTCATCCTGGGGACTGCCAGCCACTCAGTGGATTACCGGAAATCTGCTGGGGGTTTCATCCATGGATTCCGATACACAGTGCGTGCCGTCCACCGGCTGCTGGAGCAGCGCCACCACGGCGTGGCCTGGCCCTCCACCGAGCACCCCATCACACACCTGGCCAGTGCCATCATCCGGCGCATCAACGAGGCCTCTGGGCTCTACCAGATGTTCAGTGTTCTGGCCGACGTGGTCCTGCTGAAGGAGAATGCCACCACCTTTGAGTATCTGGAGGAGTTCCCCATGCAGATGCTGGCACAGCTGGAGACAATCACAGGAAAGAGGGCGAGGCACGGCCTCTTCGTCATCAACATGGAGTATGGCCGGAACTACTCTGGGCCCGACAAGGACGTCTTCTTTTCTGACCGCTCTGTGGGGCACATGGAAGACGCCTGGCTGTCTAACTTCCTCCATCCTGTCATCTACTACTACAGGCACCTCCCCACCGAGCAGGAGGTGAGGTTCCGCCCGGCAGGCTGGCCGCTTCCGAGGCCCTCAGCCCTCCACCACGTCGTGGAAGATTTCCTGACGGACTGGACGGCCCCGGTGGGACACATCCTGCCCCTGAGGCGCTTCCTGGAGAACTGTTTGGATACCGACCTGCGAAGCTTCTATGCAGAGTCCTGTTTCCTGTTCGCCCTAACACACCAGAAGCTCCCGCCCTTTTGCCAGCAGGGCTACCTGAGAACGCAGGGGCTCGTGGGAACTGAGAGCCTCCGTCAGCACGGCGTGGAGAGCGGGCTCCTGTGGGACTCTGCCACCATGGGCCAGAACCAGGGGGCCAGCGACCAGCGGCCTGGCGACCACGGGCCAGGAGGGCACCCTCTGGCTCCAGGGCCTCCGGTCTCACCTTTCAACAGCAACAAGGAGGAGCTCTGATGGGCGGCTGCTCCCACTAGGCTCACAGTCAGCCTTCCTCTTCCCCGCAGTTTCGTGCTCCCACGTGATTGCCAAAGACCCCCCTCAGATCATCGCGGTGACCGCACCAAAGCCACACAGAGGACACAGATGGGCTGAGGGCGGCCACACGGTGGTCTCCCCTCCTGTTTGGTTCAGGGATTTCTGGGAAGAGGGGTCCAGGGACAGCATCATCTGCCAGATGGAAGGGAGCCGCCTTCCACGCCAGACTTGTCTGCAAGCCAGATATCACGAACACTAGGCTGGCCTCAGCTCTGTCCCCGTCAAGTGCCCAGTGTTCCTCTTCTGAGGCCCCTGGATTCCACCCACCCGTGGAGCGTTTCACAAGTGCAATCCACCCTCATCTTCATACGGGTTGTAGCAGGCACTTTAAGACAAAGGCTCTAAGGTCCTCCACCAAGTAGGGCAGGTGGGGCCATTACCCCCTGATGAAAACACCAGCTGAGAAAGGTCAGGTGATCTCCGGGGTCCCAGCCAGGAGTCTGGGAAGCCCTAAGGCCGGCCCTCCTTCACCATACTGCCTCTCCGCCCCCATCTCTGCTTTCAAAATCCCAATGAGGGCAGAGAGAGGACAGCTCCCTGCAGGCTGTATTATTTAGGCGGGTCTCTGCCAAGCTGCTCTCTCCCCAGGACCACCCTCCCTGACTTGCCTTCCCCCTCTGTTCTCTCTCTCATCCCACTCCCCTGCCCTTTGGCATTCCAAACAGCGCCTCCTCGCCTCTGCCCTGCCAGATCAGGTTTTGTGAAATGGTCGCCATGCTGGCTATCAGTGGGGATTCTCTTGGAGGTGATTCACCCCACTGTTCCATACAGAACCCAGCTTAGCATGGGCAAGAAATCATTTATAAATGAGTTTGTAAGATAACTATGATGAATGTAGTTTCTGGTTCCCTGAGCTGTTCTGGCTTTTTTATTGTCCCTCCTCACCAGGAACCTGTCCCTTCTTACCCTCTCATCAGGTATTTGAGTCCCATTGATGAGTAAGCCATGGGAAAGCATTTGTACAGAAAATAATCATGGTGGTTTCCTCAAAAGCCCGGGATCACAGGTGATAGCTTTCTCACTGGTTCTTACCAGTAAGTCCTTCATGTGTCCACTTAGAATGGTAGGGACACAAGCTTTCCGGATCCGCTGCCCTTTACTTGGAACAGCTTCTTCATGACAGCCAGATCCAAAATCCCTTACCCCCGGCACTGCTGTCTGTGCTCCAGGTATTTGCAGTCACAACAGTGAGACTCCAAAAGCCTGAGCCTGTCAGGGAGGATGTGTTTACCCCATGGCAAGACTTGGCATAGTTTGCAGAGAGCTGAAACTTCTCAGTGAAGGGTCTCTCCCTAATCCCAGGCTGTGGAATTTGCTGTATTTCACACTGTTTACAGGTAACCAAAATTGGGTCCCATTAGTCCACCCTTCCTTTTCCTAAACTTTTTTTAAAAAATAAATCTTTTGGGATTTCCCTAGTGGTCCAGTGGTTAAGACTAGTATGAAAATAAATTATTTAATTAGGACTGTACCCATATTTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGCAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCGATGGGGTCGCTAAGAGTTGGACACGACTGAGCAACTTTACTTTTACTTTTCACTTTCCTGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAAAATCCCAGGGACAGGGGAGCCTAGTGGGCTGCCGTCTATGGGGTCACACAAGAGTCGGACATGACTGAAGCGACTTAGCAGCCGTACCCATATTATCAAATCCTGTTACACACATCTCACCTACCCAGTTACTAAAGGCTGGCTGAGCCCCTGGTTCGAGGTGCTGTAACGAATAGTTGACTGACACCTAAGTACGTGACATCTGTTGCTCTTCCCGTCATGTGCCAAGTTCTTAATTCCATCAAAATATCACCAGCCTTATTTGTGTTTAATAAGACGTGGTTCAGCTCTTACTCAGCCAATGAGACACACATTCCCTGGTATTTTTCCTGTAAATTAATAGTTGGCTTCAGAGAACTACTTTTTCCTGTGAAGATCACTGCTGCATTGGCTGGAGTCCTGTCTACATCTTGCTTGCTTCTAGCAACCTACCCTCCCCGGCCCCCGGGACCTGTTTTGTAAATCCTGGCCCCTGAGCGCCCATTGCCTTAGGCATGGCATCTTTGCTGTCTGCTATCTTCCTATTGTGTTGTATGGACTCATGTGTCCTTCATTGCCTCAGTTTCTTTCCTTGTCAAGTTTAGACAGCCCTCTAGCAGATCTTGTTGTTTCCAGCCAGATCAAGCCCCTCTCCTAGCTAAGGCCTGACTTCATCCATTCATTCTTTTTGAAAATATTATAAAGTTACACATGCAAAACAGACAAATCAATGAAACAATAGGCCAGAAGCAGAGCCTGTTCTAAGATGGAGATGTTTTTTAAAGGGAATCACAAATCAGTGGAAAAGATTGTACAGGATTGTGCAATAAATGATGTTGGACTGGAACTTTCCTGGTGGTCTGGTGGTTAAGACTAAGTTCCCAATGCAGGGGGTACAGGTTAAATCCCTGCTCAGGGAACTAAGATCCCGCATGCCCTGGGCATGGCCAAAATTAAATAAGTAAATAAAAATGATGTTGGACCAATGGGTTACTAACTTGGGGAAGAAAATCAATCTCATTTAGACCCCTATTTCATATTATACTTCAACATTAATTTCAGATTAATTTTTCAAAGCCATATAGAAACTAGAGGTGAAGAGGAGGTACTATAATAAAAGAAAGGACTTTCCAAGTTTAGAAGCAACAGAGTAATTCCCCAGGGGAAAAGGTTTAACATTTCTAGGTACAACCATCCTGCTAATATACCTATTTTTAAAGAAAATGATAAATATTAAAAGGCAAAAAGCATGGGCAAAAATAATTATGGCAGAAAACAACATACATAAAATAAATAATAAGCAAATTATCTTTTACATTAAGAACAGAATGAAATGAGAAAAATGGAGAATAGTTACATAAACTATGGTACATTCAGCCCATGAATATTGAACAGCCCTCAAAAACTCTAAAAAGTGGTAAAAGACTACATAATATTGATACAAGTACATGTGTGACAAAGTTAAGTGAAAAGCATCAGGATACGAGAGTGTAGTTCCAACTGCTTGTAACGATATAAAAATAGAAAACCATATACAAGGGAAACTGAGGAGGTTTGAGGTTTGCAGAGATTTCTTTTTCCTTTTTCCTCTTTTGCCCAAATTTGGGTTTATACTCCATGGTGAAATAAACTCATTTATTTTAAAAAACCATCTCTGTTTTTGGACTGTAGAGTTGCTGGGGGCAGGAGGGGCTGGGAGCCCTCGGCAGGGCATGGGCTCTGCCCCCCGGTCCAGGTGGTGCCACTGGTGCCATCTGCTGGCCCCAGTTGAGAAGACACTGCATCAGGTGTCGGGGGAGAAAATGTGCTCGGTCTAGAGAAGGGGACTTTAAGTGACGTGTGCGCCTCTCCTAGACTCTTTGGGCTGATAGACCCAGCTGGACACCACCAGCCTCTGGAAGAATCTTCCCTCCCAAATGACAAGAAAATGAATGTAATCTCAAGGTTAATATGAGCCCCAAATTCCTTTTGCATGATAAAAGTGGGGTGTCCCTAAAGCCTTCCTGGAAATCAACTCACCAAGAAATGAATTTGTCTGCTAAGCTCAGCATAACACCTAATCATTCACTGAGTATTTACTATATGCCCAGAACTGGTGTGGTGATTTTAAAGGTATGTCCACAAATTATTAGATACTTATCCCCCAGAGAGGTGGAGCCTCACCCCCTCCTGTTGGGTGTGGGTGGACTTAGTGATTCATTTCTAGCAAATAAAATACAGCAGAAGTGACAAGATGTCATTTTCAAGATTAGGGTATAAAAAAGACTATGGCCTTCATCTACCAAAAACTGTGCTTTCTGTCTCTCTCTAGGAGTCCCTCGCTCTGAGAGAGGCCACCTGTCATACTGAATGTGAAGGGACATCCAATGTGGAGCAGCCCATGTGGCAAGGAACCAAGCTCTGCCCACAGCCATATGAGTGAGCCTGGAAGCACACTGTATCCCAGTCCTACCTTCGGATGACTGCAGCTCTGGCCAGCAACTCACACACAGCCTCATGAGAGACCCTGAGCCAGAACCACCCAGCCAGAATCAGGCAGCTGCTTCCTGTTTGCTGATCCACAGAAACTTCAAGATAATGTTTGTTTTGAGATGCTGAATTTGGGGGGTTATTTGTTATACAGCGATAGACAAGTAACACATGCATGAAATAGCTTGCTATATTAATTATCACCACAACCCTAAGAGGTACTAGATATCACTCTTCCCATTTTACAGATGAGGAACCTGAGGCAGAAACCCATTACATAGCAAGTCAGTGATGTGGTGTTTCAAAAATCCACCTCCTCTGAGCCATCCTCTAAATATTAAACCATTAAAGCAACCATCTCCTTATTACTGTCCCTATGAGATTCCTTCATATGGACACTGGGTTATAAGAAGTCAAGAGACCA EMBV3_06723 CATTGTCTTCCAGTGTTAAAGGCACTCCCCCGCCTTTGCATTGAACTAAGGTGTCAGTCG Gene GeneID:505853|MGC148679:NM_001109790:15_cdna UTR3_Alt 4 NULL GeneID:505853 2 GENE MGC148679 NULL hypothetical LOC505853 EMBV3_26385 GGCGCTGTTTGCAGATTCCATACAGATGTATAGTCCATCGAAGATCCAGTTGAGATCACG Gene BVV0102_445599 - 1 EMBV3_25932 GK000003.2:34270502-34283444 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173000 1 XLOC_104269 Coding TCONS_00173000 XLOC_104269 Coding Coding SARS 3:34276467-34303343 j TSS128719 2038 1 TCONS_00173000_1 514 12 0.924613953488372 0.000366306388622937 0.000126557019253342 0.000656002497853901 0.000196652997397222 0.00083132512176614 0.000424093260678064 0.000391314991920114 0.000493183116608485 0.000346485129404722 9.28827389709958e-05 5.66291334091265e-05 8.20332715875688e-05 5.12696197300228e-05 1.41431413294844e-10 6.90184833492311e-06 0.00195598412776146 0.000474013559863043 0.00379677613583715 0.00026129755050881 0.000578598113330985 3.85478513444041e-10 0.000647412223794285 0.000590202113756844 0.00148957114589381 0.000571933829360769 0.000773385380489358 0.000587264192469014 0.000417771479498642 5.31239054919702e-05 0.000737975257540728 NM_174175.2 SARS Bos taurus seryl-tRNA synthetase (SARS), mRNA. 0.0 2883 99.75 0.788518155053974 NM_006513.3 SARS Homo sapiens seryl-tRNA synthetase (SARS), transcript variant 1, 0.0 2304 90.99 0.810598626104024 TCONS_00173000_1 sp|Q9GMB8|SYSC_BOVIN SYSC_BOVIN Serine--tRNA ligase, cytoplasmic; 0.0 1066 100.00 0.998054474708171 2 coding 0 0 0 0 -0.671972256344235 0.00424624752446247 0.0353446336788621 0.548037069769035 GCTTCCGCCGCGCCTGCGCAGGAAGGGCGGATCAGTGCGCGGGTGCAGTGCGGCGGTCATAGGCTGACTGCTGTGGGACGAACCTCACTTCCCTTAGTGTTGACCCGGGAGAAGGAACGATGGTGCTGGATCTGGATTTGTTTCGGGTGGATAAAGGGGGGGACCCAGCACTCATCCGAGAGTCGCAGGAGAAGCGCTTCAAGGACCCGGGACTGGTGGACCAGCTGGTGAAGGCAGACAGCGAGTGGCGACGATGCAGATTTCGGGCAGACAACTTGAACAAGCTGAAGAACCTATGCAGCAAGACAATTGGAGAGAAAATGAAGAAAAAAGAGCCAGTGGGAAATGATGAGTCCATTCCAGAAGATGTATTAAATCTCGATGACCTCACTGCAGACACTTTAACTAACCTGAAAGTCTCACAGATCAAAAAAGTCCGCCTCCTCGTCGACGAAGCCATCCTGAAGTGTGACGCCGAGCGGATAAAACTGGAAGCTGAGCGGTTTGAGAGCCTTCGGGAGATCGGGAACCTCCTGCACCCGTCGGTGCCCATCAGCGATGACGAGGATGCCGACAACAAAGTAGAGAGGATTTGGGGTGATTGTACAGTCAGGAAGAAGTACTCTCACGTGGACCTGGTGGTGATGGTAGATGGCTTTGAAGGCGAAAAGGGGGCCGTGGTGGCTGGGAGTCGAGGGTACTTCCTGAAGGGGGTCCTGGTGTTCCTGGAACAAGCACTCATCCAGTTTGCCCTTCGGACCTTGGCAAGTCGGGGCTACACTCCCATTTATACCCCCTTCTTCATGAGGAAGGAGGTCATGCAGGAAGTGGCACAGCTCAGCCAGTTTGATGAAGAACTTTATAAGGTGATTGGCAAAGGCAGTGAAAAGTCTGATGATAACTCCTATGAGGAGAAATATCTGATTGCTACCTCTGAACAACCCATTGCTGCTCTTCACCGGGACGAGTGGCTTCGGCCAGAGGACTTGCCAATCAAGTATGCCGGCCTGTCCACCTGCTTTCGCCAGGAGGTGGGCTCCCATGGGCGTGACACCCGTGGCATCTTTAGAGTCCATCAGTTTGAGAAGATAGAGCAGTTTGTCTACTCCTCGCCACACGACAACAAGTCCTGGGAGATGTTTGAGGAGATGATCGCCACCGCGGAGGAGTTCTACCAGTCTCTGGGGATCCCTTACCACATCGTGAATATCGTCTCAGGTTCTTTGAATCATGCTGCCAGTAAGAAGCTTGACCTGGAGGCCTGGTTTCCAGGCTCGGGGGCCTTCCGTGAGTTAGTCTCCTGTTCTAACTGCACAGACTATCAGGCTCGCCGGCTCCGAATCCGATATGGGCAGACCAAGAAGATGATGGACAAGGTGGAGTTTGTCCACATGCTCAATGCCACCATGTGTGCCACAACCCGCACCATCTGTGCCATCCTGGAGAACTACCAGACAGAGAAGGGCATCCTCGTGCCTGAGAAATTGAAGGAATTCATGCCGCCAGGTCTCCAAGAACTGATCCCCTTTGTGAAGGCTGCGCCCATTGACCAGGAGCCCTCCAAGAAGCAGAAGAAGCAGCATGAGGGCAGCAAGAAGAAAGGGGCAGCGAGAGATGTTGCCCTGGAGAGCCAGCTGCAGAACATGGAGGTCACCGATGCCTGAACATTCCTTTGTCCCCTCCACCAGGCTTCCACTGCCATCAGGAGCCAAACGTGATCTCAACTGGATCTTCGATGGACTATATATCTGTATGGAATCTGCAAACAGCGCCAGCACTGTTGACTGAAGCTATCATGGGTTAAGGCATCCAGTGCCATCTTTTGAGTCCCCAAGAAAATCTATCTAACTTGTCTGGGACATCAGGCTTGCAGCTCCTGACTGCAGCTAGCATTGGGAATACAGTTTTGTGATTAACGTAAATGGGTTCAGGGCTGCACAAAAGGAAACCTAGAGACTTAACTGGCTTCCCAGTTGATGGCTCCAGGAATGACACCTGGTCACCCCTCTGTTCCATTCATCAGTTCCTCCATCCACTC EMBV3_28110 AAGTTTGATAGCTGTGGGGCTGGGTATTGCAGCTCTTGGCTTTGCAGGTCGCTACGCATT Gene GeneID:618047|DNAJC15:NM_001080332:220_cdna Constitutive 4 NULL GeneID:618047 12 GENE DNAJC15 MGC148559 DnaJ (Hsp40) homolog, subfamily C, member 15 EMBV3_09380 TGTTTCTAAGTATTACATTCAAGTGAGAGCAGCAGTGAGCCCTGTGTGCAGAGCGACGGG Gene GeneID:615848|IL5RA:XM_002696967:125_cdna Constitutive 0 NULL GeneID:615848 22 GENE IL5RA NULL interleukin 5 receptor, alpha EMBV3_15751 GCTGAGCACCTAGTGAGTGCCAAGGACTATTCTACACACAGGAAATACTTCAGCCAACAA Gene GeneID:100336170|LOC100336170:XM_002686785:110_cdna Constitutive 0 NULL GeneID:100336170 4 GENE LOC100336170 NULL hypothetical protein LOC100336170 EMBV3_36533 ATCAGCTGAGAGTCACAGGCAGGTGCAGCCTCCTTCACCCCAGTCACCCATTCTTGGAAT Gene BVT0102_278163 - 1 EMBV3_29665 GK000011.2:100843338-100903349 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35362 AATGTAGCTCTTCACACTTGCCCAGAACTGACAGGGTGGTGTCTGCCTTCCTTTCGCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31376 CGTGGAGCAGGAGAAGGAGGTGCTCCTAGAGATGACCTGGGAAACGCCCGGAGTCACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20934 GGACTTGAACTTTGACAGGAGATGCCAAAAGGCAGTGGTACCGTGTTATTTGTTTATATG Gene GeneID:532862|SEC24B:XM_002688081:121_cdna Constitutive 2 NULL GeneID:532862 6 GENE SEC24B NULL SEC24 family, member B (S. cerevisiae) EMBV3_28361 GCCTACGGGTTTGACTTCTACATCCTCAAGGACCCCCAGCTGCACCCGGATGACCCTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15461 CACATAATACTATCAGGAACTGTTATCAAGGTGAAGCAGCATATGGCGAATTTAACCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25670 TTTTGGAACTTGGGACTTTTAAAAAATTTGCTCTTACTGGAGAGACATGATGGTTGCTGG Gene GeneID:614296|MGC127733:NM_001034757:141_cdna Constitutive 0 NULL GeneID:614296 21 GENE MGC127733 NULL hypothetical protein LOC614296 EMBV3_01219 GATGTTTCTTGGGTCCTGCTATATCCTGCGCACCTAAAACAGGGTCTGGAATGTAGGAGA Gene BVV0102_186063 + 0 NULL GK000008.2:39090015-39130841 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32245 TCTTCGCCGAGACTCACTACCCCGACATTTACACGCGCGAGGAGCTGGCCCTCAAGATCG Gene GeneID:507670|PHOX2A:XM_002693436:73_cdna Constitutive 0 NULL GeneID:507670 15 GENE PHOX2A NULL paired-like homeobox 2a EMBV3_25212 CAAGGTGATGCTTTTCTGTCTTTCTGCATGTTTGGGACTTGATCGGAGGACCATGGAGGG Gene GeneID:512547|ATP11A:XM_002692013:11_cdna Constitutive 0 NULL GeneID:512547 12 GENE ATP11A NULL ATPase, class VI, type 11A EMBV3_40166 TGTAGGGAAAAGCCAGAGTTTGTCCAAAACGTGCTTGGAAAGGCCATCTTCGTGTCCAGG Gene BVT0102_023173 - 0 NULL GK000016.2:50502522-50540188 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067445 TCONS_00067446 TCONS_00067449 TCONS_00067443 TCONS_00067444 TCONS_00067447 1 XLOC_041450 Coding TCONS_00067445 XLOC_041450 Coding Coding CEP104 16:50494823-50535089 j TSS50715 4927 1 TCONS_00067445_2 828 21 0.878157208493729 0.000350260521173827 4.04219436300348e-08 9.74630454287412e-41 0.000815493216610924 3.73497567168829e-35 1.61668162737309e-11 0.000243899086487591 5.82563115449103e-19 0.000668151087874162 1.79935600535944e-13 3.26162127099387e-09 4.04670237955662e-09 0.000265555674159041 0.000768817799152863 0.000205998040613409 0.0016644681675116 0.000304131705543564 1.66291822848267e-07 0.000287569188341506 2.31520226966091e-48 0.000262901761928404 0.000395789051601086 2.17994219916296e-12 0.000180955510026884 0.000487060565431479 1.05998950147066e-29 0.000872867387608808 0.000109169033091636 7.72970590873294e-05 6.26757159214572e-05 XM_001252419.4 CEP104 PREDICTED: Bos taurus centrosomal protein 104kDa (CEP104), 0.0 7202 100.00 0.810229348487924 NM_014704.3 CEP104 Homo sapiens centrosomal protein 104kDa (CEP104), mRNA. 0.0 1471 78.58 0.355997564440836 TCONS_00067445_2 sp|O60308|CE104_HUMAN CE104_HUMAN Centrosomal protein of 104 kDa; 0.0 927 78.77 0.704106280193237 0 coding 1 0 1 1 -0.139711378842028 0.33022095127386 -0.00205279071444804 0.975161777990541 GAGAGCGGCGGCCGCGGCCCGGGCGATGGGCGCTGGCCGCCGCGGCTGCTCCTCGGCTGCCACCGCTACTGCGGCTCGGGGGTGTAGGCCGGCCCGGGGCGGGGGCGGAGGCGTTGCCTGAGGTCCGCAGAGGGTGCGGCGCTGCCGAGGGCCGGCGGAGATCCTGGGTCTTGCGAGTGTCCTGACAGCCCGGCTCGCAGAATGCCCCACAAGATTGGATTTGTCGTCGTCAGCTCATCTGGACACGAAGACGGCTTCAGTGCCCGGGAACTGATGATCCACGCACCGACCGTCAGCGGGTGGAGGTCACCGAGGTTTTGCCAGTTCCCACAAGAAATTGTTCTTCAGATGGTGGAGCGTTGTCGAATAAGGAAGCTGCAGCTGCTCGCGCATCAGTACATGATCCCCAGCAAAGTTGAGTTCTACATCAGTGAGAGCCTGCCCGAGTACTTCACCCCGTATCAAGCAGAGCGGTTCCGGAGGCTTGGCTACGTGTCTCTCTGTGACAATGAGAAGACAGGCTGCAAAGCCCGGGAACTGAAGTCGGTGTATGTGGACGCAGTGGGGCAGTTTCTGAAGCTCATCTTTCACCAAAACCACGTCAACAAGTACAATGTGTATAACCAGGTTGCTTTGGTTGCAGTAAATATCATTGGAGACCCTGCAGACTTTGGTGATGAAAGCAATATTACCTCCAGAGAGAAGCTGATTGATCACTACCTGGGGCACAATGCGGAGGACCCAGCTCTTGAAGGAACTTGCTCTGGGAAGTCTGATTATATCTCTCCACTAGACGACTTAGCCTTTGACATGTACCAGGACCCAGAAGTGGCACAGATCATCCGCCGGTTAGACGAACGGAAGCGTGAGGCCGTGCAGAAGGAGCGCTATGACTACGCCAAGAAGCTGAAACAAGCCATCGCTGACTTGCAGAAGGAGAAGCCTTCATCACACTGCCTGGACGTGTCTCCTCAGCGTCCCACAGTGGACCGGCCACCTCCCGCCACTGACCCCCCTCCCAAGACCCACCCTGATTCCCTGCCCTACGATGAACGGCCTCTCCCCGTGACCCGCAAGCAGCTCGGGGCGGCGGTCTCCGAGGCAGAGAGGAGAGATGTGCTCGGCGACGAGGCTCGAAGGGCAGACACCGCAGGCGAGCCAGAGCCCCTGACGGAGAAGGCCTTGCGGGAAGCCAGCTCTGCTGTGGACGTGCTAGGAGAGGCCCTGGTGGCCGGAGCCTACTCCAAGACGTGGTCGCACCGGGAGGACGCGCTCCTCACCCTGCATAAGCAGCTGACGGACACGCCCGTGGGCACCCCAAAAGAGGACCTGAAGAGCACGCTGAGGGCCGCCGTCTTCCTCGTCAGGAGAGCCATCCGCGACATCGTGACCCCAGTCTTTCAGGCATCTTTGAAACTGTTGAAAATGATAATTACACAGTATATTCCTAAACACAAACTGGGCAGACTTGAAACGGCTCACTGTGTGGAGAGGACGATTCCTGTCTTGCTCACGAGAACTGGAGACTCTTCTGCTCGCCTCCGGGTTATGGCTTCTAATTTTATTCAGGAGATAGCCTTGTTTAAGGAAGTGAAGTCTCTCCAGGTCATCCCATCTTACCTGGTCCAGCCGCTGAAAGCCAACTCCTCAACTCACCTGGCCATGAGCCAGATGGCACTGCTGGCGCGACTGCTGCGGGACCTGGGCACGGAGGGTGCGGGCTTCACCGTGGACAGTGTGATGCGGTTTTCAGTGCAGGCCCTGGAGCACAGGGTGCGAGAGGTGCGTGAGGCGGCCGTGGGGATGATCCTGGACCTGTACGCGCAGCACCGGGCTCTCGTCCTAGAGTACCTCCCGCCCGACGACAGCACCACCCGCAGGAACGTCCTCTACAAAACGATCTTTGAGGGGTTTGCCAAAATAGATGGCAGACCCACAGATGCCGAGATGAGGGCACAGAAAAGAGCTGCTGCTGAAGAAGCGGAAAAACGAAAGAAAGAAGAAATCAGAGCTTTGCAAGGGCAGTTGGCGGCCCTAAAGGAGATGCAGGCCGAAGTCCAGGAAAAAGAGAGTGAAGCTACAAAGGCCAAGAACCAGGACACTCAAGAAAGGAAAGTGGCCCCACCAAACGCTCCAGAAATTCCAGATAACCACTATTTAGACAATTTGTGTATTTTTTGTGGGGAGAGGAGTGAGTCCTTCACAGAAGAAGGCCTGGACCTCCATTACTGGAAGCACTGCCTCATGCTGACGAGATGCGAACACTGCAGACAGGTGGTGGAGATTTCCAGCCTGACGGAGCACCTGCTGACCGAGTGTGACCAGAAGGACGGCTTTGGGAGGTGTTACCGCTGCAGCGAGGCTGTTTCAAAGGAGGAGCTGCCCAGACACGTCAAAACCAGAGACTGTAACCCCGCCAAATCAGAGAAGTTGGCAAACCGGTGTCCTCTGTGCCATGAGAACTTCAGCCCCGGAGAAGAGGCGTGGAAGGCTCACCTCATGGGCCCCGCTGGCTGCACCATGAACCTTCGCCGGACGCATGTGCTTCACAGGACGCCCGTGCTGCCACCGGGTAAAGGCCCAGCCGCCACCAGGGCAGGGACCTCAGGATCCAAGGTGGGAAGCAAGATCCCCACCCCGAAGGGGGGCCTGAGTAAAGGCTCCAGCAGGACGTACACGAAGCGGTGACAGGACGCAGCGCCTACCTCCAGAGGGGCCGCGCAGCTCCCATGACATGGCTGTGTCTCCTCGGAGCATCCCTAGATGTGCTGACCCCCGCTTCGCCCCTGCTGCCCCAGGCTCCTGGCCGTGCCCATCCCGGGTGCGGCTCTGTCTCCCATGGCTCCGCTATCGGGTCTCTGCCCTCCCGCCCAGGGTCACAGAGGGAGATGGTTCTGCCGAAAGAGCAGCACCGGGCAGGCGCATGCAGAGCAACCTCTCCAGTCCTCGCTCCCTCTAAACCTCTTGCACGTGGGTCTCTCTCAGGATGGGGGACGGTTCGCAGGGCTCATGGGGCCAGGATGGGACAAGGTGGGCTGGTGCCTGCGAGTCCACCCTGTGCTCCTCCTCCCCGGCTGTGACTCCTCCCCTCAAGGTCAGGGAGCCATCAGCCTGCAGAGCCTGCACGTCCACAGCAGCATCAAGTAAGGTCAAGGTGGAGAAGTAAGGTCGCTGCCCAGTCCCCTCAGTTCTCACCTGCAGGTGCTCTGAGCGTGGCCCACTTGACACCACCACCCCCATGCTGGCCCCCACCCCAAGGGGATCGGAGGTTAATACTGATGGCTGCACAGCAGGCCCTTCCTCAGGGGGCTTCAAGTTCTTTACATGCATGAAGCCCTAAAAATATATGAGACATTCCCTGATGCTCCTGCACTCATGTGAGCAGATGTCAGTCAGAAAGGCCTTTCCTTAAGCCCCTGGGGCAGATGGAGTGACCCCCACCCTGTTTAACTTTCAGAGGAGCCTCTGAGCCTCTGCCCAGCCCCTCACACTGACCCACTGGGATCTGTGGAAACTGGAACTGTATGTTCTTTTCTCCAACACATTATACCGTACTTTAATAAAAGCCAAGCAAAATGATGAAACCAAACCTCTCCTCACCAGCCCGCAACCAACCCAACCCCTGCAGCCTGTGGAAGTGGCTTGCCTGGCTCCAGAGCCAGGTAGCTGTAGGGAAAAGCCAGAGTTTGTCCAAAACGTGCTTGGAAAGGCCATCTTCGTGTCCAGGCCTGTGGTCCCCAGGTGCCCAGCCCACTAGAGACCCAAAGAAGGTAGCCCTGCCCTTCCTGCCCGGCCGTGTGCCCAGGGGTACGCCTTCCTCCTGAGTGTGTGACAGGTGGGCTTCCAGGATGCCCACTAGAAACTCACGGAACTGATGAAATTTGTACTGCACAGTTAATGTAAGAAATTTTAATTCCAAACCATGAAAACTAACAAAATATATAATAATATTTAAAAGAAAAACTAATAGCTATTTGAGCAAGGTACTCCCTGGGTAAGTTAGTGACAGTGAACCTGTACTAGTCAGTCTGTGGTGAACTGATACTTTCTCATGTGGTTGACTCAAAATCCTGAGCCAGAATAAGACTGACAAAGAGAATTACCTTCAAAAATATACGCTATTAAAAAATTTTAAAGTATGGAGGGAGAAATAATGTAAAACTTTACTCGATAGAGCAGAGTATGGATGCCAAGGTAATTATAAAATGATTCTTCCTGATTCAAAAAGGTGTGTTGCCACAACCTTCTAACCCATTGCTGAAGTATACATAAAATACTCCTTTAAATAGAACAAGAAAAGTTAACCAAGAAATTATCCTTTTCTCGCCAATCAAAACTTCTAAGAAACATACATATAATGTTTTCTGTATATTGTAATGTAAAGATGTTTATAAAAATACTTAATTTTTAGTGATTGACAAAATTAATTGCATTTAAAACAGGTCGATCTTGCTGATTACAGAAGAATCATGTGTTTATGTTCAAATGATTCCTGGCAGTGATCAGTGGCCATTTAAAAGGTTTACAGAGTTATATGCTATTAAGGAACCAAGAATAAAGGATAAAAAAGTAAAAAGGAACTGTAAGCTGCCTTGGCCATTCATAAATATCTAAACTTGGCACAGTAATTAATAACTGAAATTTCATTCATGAATATGTTGTGGCTATTTAACAATATTTATTATTTTCATATTTCAGAGTATTCTAATTTAAAAGAATTATCTATAAATTTGGCATTAGAATACAAATGTAAATACTTTTAATGAAAATTTGCAACTTTTTAATGTTTTGACATAGTTTTCTATTTGTCTTTATTTCAGGTACCAAAATTATAAAACATCTAAGTAATATATTTTTGTTGTTGTTTCAGGGCTCAGGGTTGAATTCACCCTGAGCATGTGAATATAATAAAAAGATTACTAAATGT EMBV3_19047 CAGTTGCGACCAGAAGATGTTGGGTATGAGGGCTGTATATCCACGAAGGAAGCTACAACC Gene GeneID:528870|NAV3:XM_002687173:120_cdna Constitutive 1 NULL GeneID:528870 5 GENE NAV3 NULL neuron navigator 3 EMBV3_11768 CATGTCCATTAAGTCGGTGATGCTATCTTAACCATCTCATGCTCTGCTGGCTCCTTCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09340 AAAGAAGAGGCTCCGTGTTGACAAATGGTGGGGAAACAGAAAGGAACTGGCCACTGTTCG Gene GeneID:782631|LOC782631:XM_002692424:402_cdna Constitutive 0 NULL GeneID:782631 13 GENE LOC782631 NULL similar to 60S ribosomal protein L9 EMBV3_24215 CAAAGAGGACCTAGTGCTTCCAGAATTTCTGCAGCTGCCTGCCCAAGGACCCAACTCCCA Gene GeneID:532605|RGS14:XM_002689019:58_cdna Constitutive 0 NULL GeneID:532605 7 GENE RGS14 NULL regulator of G-protein signaling 14 EMBV3_19055 TCTTCACCTCTGGAAGTGGCAGAACATCTGAGCTGGGGATGACCTTGCTTGGTTTGACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14616 GTGTAGTGCTGCATCTTACGACAAGGGGACAGACAAGTGGGGACGGCAGGAAAATGAACA Gene GeneID:509796|DPYSL3:NM_001101068:40_cdna Constitutive 0 NULL GeneID:509796 7 GENE DPYSL3 NULL dihydropyrimidinase-like 3 EMBV3_18103 AGTAACATATGCTTTGCTGACGAGTCTTTAGGCTTTCGACACGAACCATGGAGGTGCCGG Gene GeneID:535743|SLC9A9:NM_001076068:57_cdna Constitutive 0 NULL GeneID:535743 1 GENE SLC9A9 NULL solute carrier family 9 (sodium/hydrogen exchanger), member 9 EMBV3_06448 GTACACCTTCTACGTACAGCGGGGCGAAAGAGAAACTGCATTAAGGAAGCACTTGTTTAT Gene BVT0102_039180 - 0 NULL GK000011.2:87873676-87898073 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033597 1 XLOC_019830 NonCoding TCONS_00033597 XLOC_019830 NonCoding NonCoding - 11:87896627-87897483 - TSS24596 856 0.207943925233645 1 0 0 0 0 0 0 0 0 0 2.76524270472211e-05 4.80665248958412e-06 2.674282244434e-06 0 0 0.000197831476044393 0 0.000678802649638669 0 0.00201274413915797 0 0 0 0 0.000407258131999465 0.000117509259571964 0 0 0 4.48839548970363e-05 0.000107753924455287 7.02365002030751e-06 NM_001207061.1 ANKRD34C Bos taurus ankyrin repeat domain 34C (ANKRD34C), mRNA. 4e-43 179 87.84 0.171728971962617 0 noncoding CGACTGAGCGACTGAACTGAAGTGAATGGAGAAAAGGCTGTATTTCCCATTCTTACGTGGAAAATGTATTATGTCCTACTCGTATAAACATTAGTTGAACCAAAACAGCAATTCACATCCAACGTTGTTAGAATGTTTTATTAAGTACCATGAACACTCAACTAGAGCTAAAATGATGCAAACGATTTGCAAAACAAAACACAAACTGTCTTGGCAAATCTCCAATCTAAGTAAAAAGTGGCCACCAAGTTGAATTTCAAGAAGTTAGCTGGACGATTCTAGAACCTAACCTGTACAGGCAGAGGGGTTAGGTCCAACGTATATTTTCTGGAACTCTGTACACCTTCTACGTACAGCGGGGCGAAAGAGAAACTGCATTAAGGAAGCACCTGTTTATTTCCGTCTTGACAAAAAAAAAAAGCCTTTCTCCTTAAAACGGACGGAGGCCTAAGACACCCGGCTGGTCCGACGCGGGGCCCGGAAAGCCAAGCTGCACCCCGTTTGAAACTGGGAAGCTGATCTCGCAGAAGTTGGCGCGGGGACGGCCGCGGGGGGCCTCCCGCTCCCTGGAGTTGTCCTTCGTTCGCTCCAGCACTTCGCTACTGGGTCATCACCCCTAGCACACCCGGCCAGGGGCTCCTCGTCCGCTCTGGACCCCAGGGTTCTACAACTCGCTTAGTGAAAAGGGTGAAAGGGGAAGTCACTCAGTCTTCGCGACCTCACGGACTACAGTCCCGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCTAGAATACTGGAGTGGGTAGCCATTGCCTTCTCCAGGGGAATCTTCCCGACCCAGGGATCGAACCCGAGTCTCTCTCATGGCAGGCG TCONS_00025843 . 5' 445 TCONS_00025843 . 5' 445 EMBV3_22417 GACTTTGCAGCACCCAGAAAGATGAGAAGAGCAACAGACAACAGAGAGAGAAACCTGCTG Gene GeneID:504224|C11orf16:NM_001014846:68_cdna Constitutive 0 NULL GeneID:504224 15 GENE C11orf16 NULL chromosome 11 open reading frame 16 EMBV3_15232 ACTGTCAAGCTTTATCAGGCAGAACAGGAGAGCTTTGAAGGTACAATCGTGTGGGAGAGC Variant GeneID:100125310|B3GALNT2:NM_001103343:58_cdna 765^860 2 EMBV3_28538 GeneID:100125310 28 GENE B3GALNT2 MGC166416 beta-1,3-N-acetylgalactosaminyltransferase 2 EMBV3_22040 TCCCAGTGTGTGCAGCTGGCCTGTAAGCTCACCCAGTACACGGAGGACTCACACTTCCAC Gene BVT0102_233930 - 1 EMBV3_26718 GK000019.2:58579256-58620113 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38787 CAGGATGACACCTGGGACCTAGCTTACACCCCCACTTGGTCACTGAAGTTCAAAGCTGAT Gene BVT0102_043830 + 0 NULL GK000007.2:71156121-71158811 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21284 AAGCCTCCAACCAGAAGAGTTCGGGAAAGGTCAAAATGAGACACCACATGTCCAACCACC Gene BVT0102_125315 + 1 EMBV3_34854 GK000024.2:49590612-49610403 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140487 TCONS_00140488 TCONS_00140486 TCONS_00140489 1 XLOC_085139 Coding TCONS_00140488 XLOC_085139 Coding Coding C24H18orf32 24:49608406-49616077 j TSS104846 4291 2 TCONS_00140488_5 106 0.177114891633652 3 0.440938722294654 0.000887405687403171 0.000694073837453076 0.000983322870814128 0.000468098393962016 0.00039590826055077 0.000282194588281988 0.00022096412340964 0.000655801742306305 0.000508038648432874 7.57000963645649e-05 0.000102639755590623 0.000127782459931626 0.000133718142892016 0.000291161573377529 0.000156579264222882 0.000579456203876535 8.94554317011879e-05 0.000466204758836551 0.000435459636986001 0.000306524431788824 0.000150352529374156 0.000761542972850883 0.000251237834203772 0.000887266095155797 0.000649859862189213 0.000629779312431541 0.000306923895361593 0.000129021314906017 0.000222285035729108 0.00024375447535619 NM_001195062.1 C24H18orf32 Bos taurus chromosome 24 open reading frame, human C18orf32 (C24H18orf32), mRNA. 0.0 3606 100.00 0.465625728268469 NM_001199346.1 C18orf32 Homo sapiens chromosome 18 open reading frame 32 (C18orf32), 0.0 877 77.46 0.253087858308087 TCONS_00140488_1 sp|Q3ZC78|CR032_BOVIN CR032_BOVIN UPF0729 protein C18orf32 homolog; 3e-50 156 100.00 0.986842105263158 1 noncoding 1 0 1 1 -0.174144299899226 0.227435236103229 -0.011709140997462 0.86989425411541 GGTGAGCCGCTCGCAAACGCGCCATCCTCCGGGCGCAGCGTCCTGAGTCTACCTCGGCGACGGGGTACCTAGTAAAGCGAGCGATTCCGCCTCGCCTGCAGGCTCGACTGACGGCTGCGGCCGCGCCGGAAGTCGTCCACGCCCCCGGCGGGCGTCCCCGTTACGTCCGGCCCGTCGTCAGGCTGACGCAGACGCGCCTTTGTCAGCCCCTCCTGCGGTGCCATTGGCTCGGCTGCGGTGCGTCCCTGCGACCCTCTTTCCGGAAGCGTGGATAGTGCCCGTGGGATTTGTGGCCGTTTAGGAACTCACATCCGGGACAATGGTGTGCATTCCCTGCATCGTCATTCCAGTTCTGCTCTGGGTCTACAAAAAGTTCCTGGAGCCATATATATACCCTCTGATCTCCCCCTTTGTTAGCCGTATGTGGCCTCGGAAAGCTATACGAGAAACCAATGATAAAAACAAAGGCAAAGTAGACTATAAGGGTGCAGACATAAATGGATTACCAACAAGAGGACCAACAGAAATGTGTGATAAAAAGAAAGACTAAACTGATTGTCCCGAAGGATCTCATTGTTATAAAAATGGACCTGATACTATGAAGCACCTTCTTTGTAATTGTCTCTGATCTTTTTCCAAGACCAGAATTTGGGTTAGATATTAACAGTTTAGACATTTACCTATGCTAATCAGGGAATACCTGGTATTTGTATTTAAAATGTAGCTAGTTATATTTAACAACCTCATTTCTGATTTCCTTTTTCATTAAAGTAGTTTTCATTTCTTTTATTTCAGTTTTAAAAATATGAATAAATATATAAGGTTTGTGCCAGTAGACACTGTTACTAAGTCAGTACCTAGAAATTCTTGGGGGCTCTAGCTTTTTTTATTCAGGCTCTTCAAATTTGAGGAGTGTAATTTTACTGTGAAACATTGCAGTGAGACTGTGCAGTCAAATGAAAAGTAGTTTTGGGAAATGATAATGACTTGAAATAAAGATGTAATTACTGTCCAACTCAAAGGAGTAGCTTATCTGTGAGAATAGTAATTACTATTTATTGCTCTGAGGAAGATAGAAAAGACAGAGGAATAGGGGAAACCTCTCTGAAAAATGGAGCATCTTTTACATAAATGTTTAATGTGTAATATAAAATTCTAATCCTTGTTTTGTTCCTTCTGTTCCTACAAATGTATTAAATATTGAGTTTAGCTTGTTGTTCTTTTTTCTTTTAGATATTTAAAAGCAAGATTTTTAACCACTTCGGAAAGCAGGATTGGAATAATGTGATGGCATCAGGATAGTTATGGGGCAGTGATACTTTCTTCTTTTTTTAAAAAAAATTTAGATTGTGTCAGTTATTTTGTTCCATAGTAATACACCCTAAAATTAGTGGTTTTTAGCAATAGTGATGTGACTGGTAAGTTACTTGCTGGTCTGGGCCTGTCCGCATGGTCTTTCATCCCTGGGCTTCTTCCCCCTACTGTTGAGATATACAAATATTCAAAGATGACAAGACATATCTTTATATAATGTTTGTGCTCTCTGAAGCAAGGAGAAATTAGAAGGAACTCCCCACCTTGGGTCCCCAATGAAGTCCTGGATCTTAACTGAGGCTCTGTTAAACTGTGTCTGGTTAAGTCATTGATCCACCTTGAACTTCCTTTGATAGAAATGAGTCTGTTTCAGCTTTTCTACCCCAGCGCACCTGAGGGATTAGATAAATTTCTGTTAGCTAAATCCAGTTGATTAATTTGGATTGCTTTTTAAGGTATTAAAAACTATATTGTGAAAGTAGCAGATGTTCATAGTAGAGCAATGCAAGGACAGGTTAAATGAAGAATGAATGTTCTTTCTCAACTCTCATTCCTTTATTCTGGCTCCAAAGATGGTAACCACTATTAGCTTTTCCTACAGGCGTCTAGCAACTTTGTTAAAAATAGTTTTTATTAAACATACCATTTATTAAAAACCAAATAATATTGCAAGGTTTATGATATCCTTATTCTCATAGTCCCCAAAGGATTTACTCATTTAGCTGTTGCTTTTATCTCATGACTTATCTTCATATTTCTAAGTGATACATGTATACAGTTTTGGGAGCTATCAGCTGTAAACATTACTGACTTCTTCCATGACTGAGATATAGCTATTTTACACTATATTCCCTCTTCTCCCACCCATCCTCCAAATACTATTTTTGTAAATTTTGAGTGAAAATTTGCAAAATTTTACCTGTTGATCAGTATGTATATCATTATGTGTGCTCTAGATGTCTTCCATTTGTCCCTCCAAATCTTTGCTTCCCTCACCCTACCCTCCTGCTCAAGAAAGCTGTACGGACTACATCAGCGGGCTTCCTGTGACCTCTGGGATCTGTTGGTTTGGCCAGTGGTATCTGCAGCAGGAGATGGGAGAGAGTAAAGGAAGGTGTGAGGTCAGGGTATTTTTTCCCTTGGGTCCTTCCCTTCAAGGTGTCTTCAGGTCAGATGTGTTCCTCAGCCAGAAGTCACTGAACCTCATGGTGACCAGCTCCACACGACTCCTTCCAGTTTCCACTAACCTCTCCCTCTCCTTGCTTCTTTGGCCCTAGGGGTGATGGCATCTGTTAGTACTGGCTCTGGGTCACTGCCTTATCTCGCAGGTACCATCGTCTCCTTGCTGGGATACTGATAGGATGAGCAGGTGACTACGGCTCACTGTTTGGCTTGTGAGTTTAGTGCGATCAGTTTCCTTTCGCGGAGCATTGCTTTCCTGCTTTTCCTCTCCCTTTTCTCCCCCTATGCTTCCTCTGTTGACTAGTTGCTGCCTGGGTGCAGGGCACAGGGGAAGTCCTTAGGACTTCTCTTCACCACTCCTGTGTTGCATCTCTTGTTCCCTGGATCCCACATCTTCCTCTGTTGGTTTACTCCTTCATTGCTCCTGAAGCATACCAATTTTTCTAATTCAGTACTGAATTTCATAAAGTTAATATAGATAATTTTGGAAAGTGATGGCCTATATCATCCGAGTTCATTTAAACCTACCTTCCTTAGAATTGCTGGTCTTCTAAGGCCATTTCTACTTCTAGCAGTCTCACATTAGAGAGAGAGACTAGTGGTTCCCAATCTTGTATTTTTATATACCACTAAAATATATATATATTTTTTAAGAAGTTGAGCGGATTTCCCTGGTGGTCCAGTGGTTTAGAATCCGCCTTGCAATGCAGGGGATGCAGGTTTGATCCCTGGTCAGGGAACTAAGTTTCCACTTGCCACAGAGCAACTAAGCCCAAGTGCTGGAGCCTGAGTGCTGAAATAAAGAGCCAGTGCTGCCAGAAATTTCTTAAAAAGTAGAAGAGGATGATCCATAGTTAGGGGAAGCACACTGACTGAAACCGCCCACCCTGGCCAGGCACCATAGGAACCCATTTGCATGAGTTGTTTTACGACAGGAGGTCCTGGTAACACAGAACTAATAAGCCTCCAACCAGAAGAGTTCGGGAAAGGTCAAAATGAGACACCACATGTCCAACCACCTCCCAGAATCCTCTCTGGCATTCATCTTGGCTGAACAAGGCATGCACCACCAGAAAGGACTCCAGAGTTAGAATGATTGGCTAAAGACAACCCAGAAACTGATCCCATCACCATAAAACTCAAGACTGCAAGCCATGTGACAGCTGTTCTCCTGGGTTCCCTTACCCTACTGCTCTCCACCTGGGTGTCCTTTCCCAATAAAATCTCTTGCTTTGTCAGCACATGTGTCTCCTCGGACAATTCATTTTCGAGTGTTAGACAAGAGCCGGGTTTCGGGTCCTGGAAGGGGTCCTACTTTCTGCAACATAGTTGCCAACATTTTGTTTTGCCAAGTGGGACTATATTAAAAGGATGTGATTTATTATCACCATTATTTCATAAAAGACATTTTGACAGCAAAAGAGTGAAAAGGAACATGGGAATAAATAACAATAGCCCATTAACATGAATACATTTATAAAGGATATCTTCTTGTTTTCATGAGAAATTCTCAATTTTGGCCATGTTTTTCTTTTTATGGTTGCTGAAAAATCATCTATCCTCGGACTGGATTTGGTAGTAACATGTCAGTCTATATTATATATATGCTAAGTGTAGAGTCTAGGATTCCAAAGCCATACCCTTAAATTGACTTGAAATATTGACCCCCTGCAGAGCAGTCACGGTGGCTGATACCCTTGTCAGACAGACCTTAGTGGGAATAATGGGGCAGAAGTGGAGAAGAGTGTAGACTAATTAACATTGACTTGTTTTCAAGATTTGATTCTGCTCACCC EMBV3_01384 TGTTAAGCTAAGGACATTTGCGACTGCAGCCTCTGGCACCAGCTCTTTGATTACTGTCAG Gene GeneID:532085|TMOD2:XM_002690923:227_cdna Constitutive 0 NULL GeneID:532085 10 GENE TMOD2 NULL tropomodulin 2 (neuronal) EMBV3_20556 GGACATCATCAAAAGGAACATCCAGAAGTGCATTAGCAGAGGCGAGCTCCAGGTGTCTCT Gene GeneID:618177|SYT11:NM_001099171:236_cdna UTR3_Alt 2 NULL GeneID:618177 3 GENE SYT11 MGC152070 synaptotagmin XI EMBV3_07398 TTCTTCCCTTCATCCTCTGACCCTGACAACAGAGACAAGATTGGGGCGGTGCTGTTCACT Gene GeneID:509370|LOC509370:XM_002693776:51_cdna Constitutive 0 NULL GeneID:509370 15 GENE LOC509370 NULL similar to olfactory receptor, family 1, subfamily S, member 1 EMBV3_43623 CACTGCTCTTTACTTCAAGGTCCCTGCTCTGCCTGTCCTCCCACTTGTGAGCATCTTTGT Gene GeneID:514552|LOC514552:XM_002695372:2_cdna Constitutive 0 NULL GeneID:514552 18 GENE LOC514552 NULL similar to cationic amino acid transporter 5 EMBV3_17813 TCTGAAGATCACATTAGTAAAAAGACTGAGGAAGTAGTTCTAAAAGATGGAAGAATTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21495 CCGGAGCATAAATTCAGCCAAATTGAGGAGCATGGTGGACTTAACATTGACTTCCTGAGG Gene BVV0102_383988 - 1 EMBV3_29421 GK000005.2:12817564-13756350 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190941 TCONS_00190944 TCONS_00190947 TCONS_00190953 TCONS_00190938 1 XLOC_116770 Coding TCONS_00190947 XLOC_116770 NonCoding Coding - 5:12773404-13272914 - TSS143180 1111 1 TCONS_00190947_1 55 0.32043204320432 5 0.997785825680819 0.00018359870310182 0.000207338571799765 1.04153026733499e-05 2.22567819598538e-05 1.06107747369925e-05 1.97514899311901e-34 0.000160077998903615 9.85850429800813e-236 0.000382229452442595 0 0 8.59135434773293e-29 2.01847468793023e-31 3.15260200992995e-14 5.29128544610967e-11 0 0 0 0.000468222897986648 1.88583183144058e-05 9.96924243863547e-05 0 1.1045975958468e-12 0 0.000487097141837406 7.5782769453599e-05 0.000242951091533436 0 0 0 XM_005227966.1 MDR/TAP PREDICTED: Bos taurus ATP-binding cassette, sub-family B (MDR/TAP), 3e-46 190 92.97 0.114311431143114 0 noncoding 1 1 1 1 0.0180675092755312 0.892911282421616 0.0055170108226709 0.934919069566811 TAGACCCAGCCCACTTCTGTAATACCCCTGCTTCTGTTTGCTGTGCTCCTTCTCTGCCTGCAGAGTTTTGATTCTAAGTCGGTATATCTCTGGCTCCTCCAGTTTGAAAGACTGCAGAAAATTCAGCTATGTCCTTCAGAGACCTTAGCTCAGCTCTTTGGTCTTCCTGCTTACATTACTTCAAAATAGGACCTGTTCCTTGAAGGACCTAGAAACGGCCCATGGTGTGGGAAAGCAGAAATGAGAGCTTCAGATGGAAAAAAAAAAAAAGAAGAAACTGACCCCATCACCTTCTCTACTGTGGCAGCCAGCCTGGAAGCAGGCCCACTTTGAAAATTCAAGACCTTATACTATAGACTTTTTAAAAAAAATTTACGTCTGCTTTCTTTTCCTCTTCAGACCTGAAGGTACCTGTTTCTGAGCCTAATGGTTTGGAATTTCTTTGTATTTTTATCTTCCGGATCAGTGGAAAGCTAAGCAAGAGGTGTGTATTAACCCCCTCCTCAGGAAGTCAATGTTAAGTCCACCATGCTCCTCAATTTGGCTGAATTTATGCTCCGGTTCTGAAGGGCTGAAGTTCTGCCAGGCTTCCTGCTAAGTGACCACAGCAGGCTCAGTTCCAAGGAGCAAGATGAAAGTACTGGAGCTGAAGGAGAATCCAGGCTTATCCAAGTTTACAAAGCTGCTTTGTACTATCAATAGGATTACAGTTATATATTTTGACATATAACTTGAAAATCGTTTTAGTATCCTTTGAAAACAGAAGTCTAATTCAACTCTAGTTTTGAAAAGCAAAACAGAATGCAGGTTATCCGTTCAAGCTATGACTTTCTAAAAAGTTCCAACAAGATCTCATTCATTTTCTCACAGAATAAGATTAAAAATTTGCAGTGAAAAAAGCCCAGATTGACAGATAATTTAATGAGAGAATGTTAAGGAAACTAACATACATTATAAAGCAGATTGAATTTATTAACTATCATATCACATCAGATCAGTCACTCAGTCATGTCCGACTCTTTGCGATCCCATGAACTGCAGCACGCCAGGCCTCCCTGTCCATCGCCAACTCCCGGAGTTCACTGAGACTCACGTCCATCAAATCAGTGAT TCONS_00190920 TCONS_00190921 TCONS_00190928 TCONS_00190929 TCONS_00190934 TCONS_00190936 s 3' 58907 TCONS_00190920 TCONS_00190921 TCONS_00190928 TCONS_00190929 TCONS_00190934 TCONS_00190936 s 3' 58907 EMBV3_30141 GCAGAAACAACAGTGCCCAAGCATTTCTTAGCCCAGAGAACCCAGAAGAGCCTTACTTGG Gene GeneID:522122|SMC1B:XM_002687980:30_cdna Constitutive 0 NULL GeneID:522122 5 GENE SMC1B NULL structural maintenance of chromosomes 1B EMBV3_33478 AGCTTCATTGCCCAGCAACCACTCAGAAGCTGTATCTGCTCAGCCCTTCTATCCTTTGGG Gene GeneID:788142|MGC152321:NM_001099207:184_cdna Constitutive 2 NULL GeneID:788142 3 GENE MGC152321 NULL similar to KIAA0454 protein EMBV3_29024 TCAGCAAACACTACAAGTCCACGGTGGGAGGGCAGGAGCGCTTCACCTCTATGACCCGAC Variant GeneID:539000|RAB7L1:NM_001099094:91_cdna 437^508 4 EMBV3_39941 GeneID:539000 16 GENE RAB7L1 MGC148495 RAB7, member RAS oncogene family-like 1 EMBV3_12077 CCCCTGTCCAAACCCAGACTCCTGTGTACAGATGCTATTTAGAGGGAATCAGAAAAATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02899 ACATAAGGGACTTGATCATCCTCAGATTTTGGTATCTGTGGGGGGTCCTGGAATCAGTCC Gene GeneID:510078|ZNF354A:NM_001075429:20_cdna UTR3_Alt 1 NULL GeneID:510078 7 GENE ZNF354A MGC143044 zinc finger protein 354A EMBV3_14646 CAAGCTGGTGCAGGTCAACAGCCGCTTCAACTCGCCCACTACCCAGGACCTGGTCTACAT Gene GeneID:530005|WNT5A:XM_002697005:398_cdna Constitutive 0 NULL GeneID:530005 22 GENE WNT5A NULL wingless-type MMTV integration site family, member 5A EMBV3_02745 GGCCACATTCTACTGAGAGGGAATTTGACGGAGTAAAAGACAGTTATACCTCACCCGAGC Gene GeneID:512927|C13H20ORF118:NM_001075590:1015_cdna Constitutive 0 NULL GeneID:512927 13 GENE C13H20ORF118 MGC151881 chromosome 20 open reading frame 118 ortholog EMBV3_31916 AGGTTTGGGTACATCTACATCCATCCTACCTTCTGGAGAGGCATGCGGAGGTTCCAGAGA Gene GeneID:100335404|LOC100335404:XM_002688738:66_cdna Constitutive 0 NULL GeneID:100335404 7 GENE LOC100335404 NULL hypothetical protein LOC100335404 EMBV3_07572 CATGTAGTTTGCTTGTTCCTTTTGACTGCTGAGTAGCAACCCATGGTGGGGACACACCAC Gene BVV0102_240988 + 0 NULL GK000007.2:66927510-67287086 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00336 GTGCTCATACCCCACCCCACGTATCTCTTGCATATGGCTGTTCTTGAGTTGTGTCCTTTG Gene GeneID:539171|PDZD3:NM_001034664:187_cdna Constitutive 2 NULL GeneID:539171 15 GENE PDZD3 MGC129076 PDZ domain containing 3 EMBV3_13451 CAGGAAGAAGCACAATTTGAAACTAAAAAGCTTTCGTCAGGAGTGATAAACCCAAGCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33879 TAGGGGAATCTGGCCTCGAGACGTGTTGAAGAAGGTCTCTCGAGGTCTTTCCCGGGTTGA Gene BVV0102_094138 - 0 NULL GK000029.2:30886966-31113680 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063808 TCONS_00201120 TCONS_00149038 TCONS_00162571 TCONS_00054133 TCONS_00010832 TCONS_00231771 TCONS_00218950 TCONS_00217533 TCONS_00131534 TCONS_00123275 TCONS_00063805 TCONS_00230831 TCONS_00117596 TCONS_00240372 TCONS_00167122 TCONS_00210949 TCONS_00255144 TCONS_00231774 TCONS_00186490 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00147823 TCONS_00149043 TCONS_00033204 TCONS_00131535 TCONS_00116087 TCONS_00101341 TCONS_00149042 TCONS_00111145 TCONS_00232767 TCONS_00222116 TCONS_00231768 TCONS_00186557 TCONS_00217532 TCONS_00054136 TCONS_00158314 TCONS_00230833 TCONS_00186834 TCONS_00071397 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00178734 45 XLOC_038534 XLOC_122768 XLOC_090915 XLOC_099452 XLOC_031942 XLOC_006383 XLOC_141259 XLOC_132269 XLOC_131531 XLOC_080239 XLOC_074829 XLOC_038531 XLOC_140321 XLOC_071762 XLOC_147036 XLOC_101958 XLOC_129459 XLOC_158076 XLOC_141262 XLOC_112542 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_089710 XLOC_090920 XLOC_019438 XLOC_080240 XLOC_070256 XLOC_061582 XLOC_090919 XLOC_067045 XLOC_142251 XLOC_135425 XLOC_141256 XLOC_112609 XLOC_031945 XLOC_096768 XLOC_140323 XLOC_112885 XLOC_043168 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_108507 NonCoding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_42753 TAAAAAAATGCAGAATTCTTGCTTTTTAAGGAGGCCGCAGTACCGTAAAACTGGAATAAA Gene GeneID:535127|MYO6:XM_002690030:17_cdna Constitutive 2 NULL GeneID:535127 9 GENE MYO6 NULL myosin VI EMBV3_37390 CAGTGACCGGCATCCTTACAAGAAATCAAGGCACAGAACGACCACACGGGGACACAAGAT Gene GeneID:515651|LOC515651:NM_001040531:49_cdna Constitutive 0 NULL GeneID:515651 17 GENE LOC515651 MGC128146 hypothetical LOC515651 EMBV3_08967 CTTATCCTGGGGTCCCTTCTCTTCCTGGTCCTTATCATCCTGGTGACTCAGCTACTCAGA Gene GeneID:751804|LOC751804:XR_084195:90_cdna Constitutive 0 NULL GeneID:751804 5 GENE LOC751804 NULL WC1 isolate DV100 EMBV3_08828 CAACCGGCGACGCTACCCAGTGCATCTATCCCGTGGTTCTGCCTGCAAGTATACAGACTT Gene GeneID:614103|DCTPP1:NM_001038202:389_cdna Constitutive 1 NULL GeneID:614103 25 GENE DCTPP1 MGC133613 RS21-C6 XTP3TPA dCTP pyrophosphatase 1 EMBV3_08312 AAAGACAGGAGGAGCCTTCGCCTCAGTTTCCCCCCAACATAGGCCACCAGATGGGCTCCT Variant GeneID:515890|URM1:NM_001075729:103_cdna 769^941 1 EMBV3_01358 GeneID:515890 11 GENE URM1 MGC140746 ubiquitin related modifier 1 homolog (S. cerevisiae) EMBV3_32549 GGAGATGAGCACAGTAAAAGCAGAGACACAAAAAACCTCCTGACCCTAATGCAGAGGTGG Gene GeneID:783234|TTC23L:XM_002696397:154_cdna Constitutive 0 NULL GeneID:783234 20 GENE TTC23L NULL tetratricopeptide repeat domain 23-like EMBV3_11826 ATTCTGTTAAGTCTCAGTTCTGAAGGGGAAAACCTCAGTTGGCCTCTGCCCCACTTCCCC Gene GeneID:281711|CPLX2:NM_174283:207_cdna Constitutive 0 NULL GeneID:281711 10 GENE CPLX2 NULL complexin 2 EMBV3_17331 GTGAGAACTAGTCATGGCAGAAGACCTCCATCCAAGACCTCCCTGGCGTCGTCAATGGGA Variant GeneID:514177|IFT88:NM_001110786:43_cdna 154^210 1 EMBV3_06462 GeneID:514177 12 GENE IFT88 NULL intraflagellar transport 88 homolog (Chlamydomonas) EMBV3_05407 CTCTGTCACTCATCGCCACCTCCTACAGCCATGTGTTGGGGGCTGTTCTTCATATGCACT Gene GeneID:100298103|LOC100298103:XM_002688585:302_cdna Constitutive 0 NULL GeneID:100298103 7 GENE LOC100298103 NULL similar to olfactory receptor Olr1654 EMBV3_38994 CCCAGTTCTGTTTACTGGACGTATATAACGATATTGAATTTTCCCTCCATCAGCATCGTC Gene BVT0102_012044 + 1 EMBV3_10408 GK000009.2:529555-636458 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08507 TGCCACACTGTATAAAAGAGCTCCTCCCTGTCTCTTCAGACGCCCTCATTGTCATCTGAC Gene GeneID:282591|ASB15:NM_174687:13_cdna Constitutive 0 NULL GeneID:282591 4 GENE ASB15 MGC143340 ankyrin repeat and SOCS box-containing 15 EMBV3_21808 CGACACCCACTTAGCCCCCAGCACCTCTGGGGCAGCCAGTAGCACCATGTCTGTGACCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19993 CATACTTATTCCAAGATGGTTTGAAGGTCCAAGGATGAAAATAAATTAGGGAGAATAATG Gene BVT0102_058180 + 1 EMBV3_13207 GK000003.2:75148095-75243051 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170287 TCONS_00170279 TCONS_00170282 TCONS_00170291 TCONS_00170283 TCONS_00170284 TCONS_00170286 TCONS_00170289 TCONS_00170290 TCONS_00170285 1 XLOC_103550 Coding TCONS_00170291 XLOC_103550 Coding Coding - 3:75191764-75240819 - TSS127277 4865 1 TCONS_00170291_1 272 0.0826310380267215 10 0.901027439148693 9.77511728000922e-14 1.12107671245654e-06 5.24410469606808e-12 0.000169288665638753 0.000149959061048799 0.000103426756020917 0.000302034601442948 8.73665915905092e-05 0.000994882501786723 0.000239719119615212 2.88717159959519e-05 0.000127652744790643 0.000100174320610231 0.0001178284719037 0.000195459727920032 0.000782510352857858 0.000149506629052798 0.00117930279894721 0.000111000536652771 0.000262096386340856 7.66281415132005e-09 0.000731619982196882 0.000302675647359829 0.000377810242518736 0.000234246733686277 1.95526414971673e-07 4.66142615585066e-05 2.60218908702912e-05 2.79951027153512e-08 2.4715732697669e-05 XM_003585473.2 LOC100851638 PREDICTED: Bos taurus ankyrin repeat domain-containing protein 13C-like (LOC100851638), partial mRNA. 0.0 702 100.00 0.0797533401849949 NM_030816.4 ANKRD13C Homo sapiens ankyrin repeat domain 13C (ANKRD13C), mRNA. 0.0 3934 83.45 0.761562178828366 TCONS_00170291_1 sp|Q8N6S4|AN13C_HUMAN AN13C_HUMAN Ankyrin repeat domain-containing protein 13C; 0.0 559 98.90 0.996323529411765 1 coding 0 0 0 0 0.068807509716549 0.720050465066499 -0.0283744712434912 0.542825617997869 AGGTGACTTTTATCTCGAACTTCACTGGGATTTTCAAAGCTGGGTGCCTTTACTTTCCCGAATTCTGCCTTCTGATGCATGTAAAATATACAAGCAAGGTATCAATATCAGGCTTGACACTACTCTCATAGACTTTACTGACATGAAGTGCCAACGAGGGGATTTAAGCTTCATTTTCAATGGGGATGCGGCACCCTCTGAATCTTTTGTAGTATTAGACAATGAACAAAAAGTTTATCAGCGAATACACCATGAGGAATCAGAGATGGAAACAGAAGAAGAGGTTGACATTTTAATGAGTAGCGATATTTACTCTGCAACCTTATCAACCAAATCAATTTCTTTCACGCGTGCCCAAACTGGATGGCTTTTTCGGGAAGATAAAACAGAAAGGGTAGGAAACTTTTTGGCCGACTTTTATCTGGTGAATGGACTTGTTTTAGAATCAAGAAAAAGAAGAGAACATCTCAGTGAAGAAGACATTCTTCGAAATAAGGCCATTATGGAGAGTTTGAGTAAAGGTGGAAACATAATGGAACAGAATTTTGAGCCGATTCGAAGACAGTCCCTTACCCCTCCTCCTCAGAACACTATTACATGGGAAGAGTATATATCTGCTGAAAATGGAAAAGCTCCTCATCTGGGTAGAGAACTGGTGTGCAAAGAAAGTAAGAAAACGTTTAAAGCCACGATAGCCATGAGCCAGGAATTTCCCTTGGGAATTGAATCATTATTGAATGTTTTGGAAGTAATAGCTCCCTTCAAGCACTTTAATAAGCTTAGAGAATTTGTTCAAATGAAACTTCCTCCAGGCTTTCCTGTAAAATTAGATATACCCGTGTTTCCTACGATCACAGCCACTGTGACTTTTCAGGAGTTTCGATATGATGAATTTGATGGCTCCATCTTCACCATACCTGAAGACTACAAGGAAGACCCAAGCCGTTTTCCTGATCTTTAACTGACACAGAAGATGATGCCATTCAACCAAGGAAGGCTAGAGATTGCAGAGACCCCAGAGTGAATCCAAGTAGAAGGGACAAATGCTTTCATCGAGGAAAAGGGAATTATGTTGACTCGACACATCAGTGATATAATGAAATGGGCCTCTAATAAGAATTTCAGCAAGTTTCCTGATGTGCCATTTTCAGTCTTTTTAAAAATATACATATTATAAGTGTAATAGTTTGACACCTTAATGACCCCACTTCCTTCTTATGTAAAACAGCTATGAGTGCTGTGATTTGTTTTTAAAAATTTTTACACTTCTTGTTGAAATATATATGCATATATCTATATCTATATCTAAAACACTCCTGGACCATTAACATAAATTAAATGTCTTAAGAGATATGAAGCCCTTTTAAACTTGTCATCTTATATTCAAGGTGACCTTTATAAATATTCCTTCAAGCTTTGTTTTCATAAAATGTAAAGTATGTAACATTATGTATAGTTCAGTAATTTGAATGTTCGTTCAATATAATGAACTAGAAGGAATGCAGTTTTCTGTAGATGAATGAACCAAATGGTAACCATTAAACAGTTGCATTTATATGTTGCAATACATTTCAGAAGGAGCGTTCACTCTGCAGGGAATAAGGTACCTCCTTTAGCACCTTAGTGCAATTCATTGTGGTGCTATTTGTTTTTACCTGAATTCTTTCTTCAATGGAAAATGTTTGTTAATAATCTTCCTTTCATAGAACCTCGGTTTTTTTTTTCTAAACTTGAGTTTAAAAGTCCTTTTTTGTGTTCATGATAAGGTACAGTTAGCATGCTTAAAGATACTCTTCTTCCAAATCTGAGCACTTTAAAGAAATTCCAAATATTTAAACTTGCTTCCTAATAAGTGCACATCATTCTGATTATTTCGTTTGTTTTTAGTGGTATATGGATGCATTTGTGTCAGTTTTAAAAACAATCCACATATTTTGGACATCCCTACATATTTAATGCTTTCAAAATAAGGTAAAAACATTTTATATGCTAACAGAATATATTTGTTACAAGTTAAATTCCAGAAACGTACTCAAGACTGACAATTCCTACTGTTATTTTTTTAAGTCACAAGAAAATATTTATTGATTTTAATTACCTACAGTGTTTAAATCATGCATTATTCATTTTTGCACTTAAAATCTTTCATACTTATTCCAAGATGGTTTGAAGGTCCAAGGATGAAAATAAATTAGGGAGAATAATGTATTAACAGTCATAAAATGTTACGTTAAAGAACTTAGCTGAAGAAATGTTTTTAAATGTATCCTGAGAAATGTGTCAGAATGGATGTCAAGTTTTTTAGAGTGATCAGTAATTTAAACTTTTTCCAGGATTTTAAATAATTTGAATGAGTTTAGAAACCTTTATTGAAGAGATGATTTATTTAAAAATCCAAAGCATCAACCGTAAGAAATTTTATAATAAACGTCTTTGAAGCTGCATCTTCCATGCTGATACCTACTACACTGCATATGTTGCCAGTCTACTAAATATATTTTATATGATGAAACATAATCATAGTTAAAAAGATTCAAAGACCAGTTACTACCTTATGTGGGTCTGTTGAATTCTGTGGAAAGAGTGGGTAAAACCATACTAGGTTTATTGAATAGAAGTTGATCCCTATTATTTTGGGAATGTTTTGATCAAGTGACTTAGAGATTCTATTATCCTGTCAATGATTATATGAGGTTTTGAGAGACTGAAAGGCAGTGAATGATCACTGTTGCTCTTAGGCTCCCTTACTTTGTGGCAATATGGTATACTTTCAGGAATATACTGCAGATCTTTTTTGTACTAATCCAGTGGGGGGAAAAATGGTACATTGCAGCTTAGGACTTATCAATTCCCTACAAGCTGTGACTTTTGCCGGGGTACACTGGAGGTAGGAAGACTACTGAAAACTTTTGCACTTGGATTTTAACTTTCTCTCATAAATAATAATAGAAAGAAATTATCCATTCCAAAATGTCTTTTATCTGACCACAAAGGACAGGTATATGTCAGTATCTCTTATGATGGTAAAAATAAGGAGCTATTTAATGCAAATAAACTTTTCACAATATTAGACTTTTCAAAATGTGCCTTTTAATCCAGCTAATGAGTGAAGCTATATGCTGTTTCAAGTAGATAAAAACTTTATATTTTGATACTCTTACATGAAAATCTAAGTTTTATAATGTAGGTTCATAAAATTCTCTATGCCTTCCATTTGTGATTAAAAAACTTGTTTAAAAATTGGACTATAAAATGGTTACCTTAAATGGCTACTTAAAAGGCTCAATATACCCTGCCACCACTATGGTTTCAGAAGAATAGTCTTGTCTTAAAAGAAAATTCCCTAAAGACAATTTGCCTCTCTCTGCAGACTAGACATTCATGTACAGAAAATTATGAAGCTTCATTAAGAGGGAGGCACAAAGCTGATGCTCTGATAATATTTTGAGTATAGCTACACACAATGGTCTGGAAATGGAACACATTTCAGAGAAGCTGAAAAACTATTCAGTTTCTTTCTCCTGCTTAGAACTGGTATTGAGCCCCACTCACACAAAAATGTTTTCGTAGTGTTATTCATGCACAGCTTATCATTCACATCTTGAGGGAAGGGTGGTCAATAACAAGTGTTTTACTAAAGCTTCTCCCTAGTTTCCACTTAGCCTACAGCAGAGCTTGTTTCGAGGCCACAAAGGACTAAAGAAAAATTAAATTAAGGGGTGCTTCCTTTTGTTCATTCATATTATTTTTTTATTTGCCAACATGGTTTCCCTGGTGGCTCAGATGGTCAAGAATCTGCCTGCAATGCAGAAGACCTGGTCAAAAGATCCTCTGGAAAAGGGAATGACTACCCATTGCAGTACTCTTGCCTGAATTCCATGGACAGGAACCTGGTGGGCTACAGTCCATGGGGAGGAAGAGTCAAACACAACTGAGTGACCAACACACAACATGGTTGACAAACAGTTCTAAAAATCTAGGTGAATTAGAAGTCCTGTTTGTAGTATGCTAACCTTTACTGTTGAGTTGGGAGAATTACTGATTAGTATAAACACAATATGCCTCTACTGTTAGCTCCAGCAAAAGCTATCTTAATGATATTTTCCAAAATGACCAAAATGTATCTTTTCCAAAATACCTAAATTTGGGAACTTTAAAAGACAACTGACAGTGAAACTTTGATATGTGACTTAACTACCTGTGATGATCTTTAATTGGAGGATAATTACTTCCCAATAATGTGATGGTTAATGCCATGAGGCAATACCTGTGATGATTTTTAAAAATTGTTATAGCCCATTTTAGAATAGTGCTTCTGGCTATGGCACATATGGTACATAAACTTTTAGCTGTTTTAGTTCATCCTTGTGGGTTCCAGCTTGTGGTTTCAATTTAACCTCAACCCCTCCAACCAGCCTGGTGTTCTTGACTCCTGTGGACTTGAGTCTCCAGCATCAGATGCATAGTATAGACAATTTTGAGACCATTAAACCAGCTCCCACAATTAAGGTCAAATCTCTAACAAACCTTTGAGTCATTCTGCTTCCTGGACTGAATGCTGACTGAAAAGAAGAGCAAAACTATACGATGCTAACCTGACGCTTGTCTTCCAAAACCTGGTATTTAACACCTACTGTAAATTTTAAGTATATTCTTACGGATATCCCCACTGGTAAAGAATTAGCATGGTTCACACCTGAGTTATTTTGCTAAAGACTGTCTGAATGAATTTTAGGTATTCTTTGATACTAAAATAGGAACAAAAATAGAATACTCAGAATCAACAACTCAATAGTTTCAGACATATTCTGAAAGTACCAATAGTATCTCCATTACATCCATATTTAATAGTCTCATTTAAAAAC TCONS_00173715 TCONS_00173719 TCONS_00173716 TCONS_00173717 TCONS_00173718 r 3' 883 TCONS_00170288 s 3' 43671 EMBV3_16019 ATTGAGTCATTAGTGAGAATTGGAGACGTGCTTAAGTGCTGGTTTCTAGATATGTGAGAG Gene GeneID:506045|ATAD1:XM_002698369:155_cdna Constitutive 4 NULL GeneID:506045 26 GENE ATAD1 NULL ATPase family, AAA domain containing 1 EMBV3_32607 GAATCATCCTGTGTGCTTGGAATCCAAAAGCCAGGTGACTTCGTGCACACTCTGGGAGAT Variant GeneID:507631|TYMS:NM_001037816:56_cdna 655^830 2 EMBV3_32643 GeneID:507631 24 GENE TYMS MGC134366 TS thymidylate synthetase EMBV3_07193 GCGTTCAGGAGTCTGGAGACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGAT Gene GeneID:511673|MMAA:NM_001100342:7_cdna Constitutive 1 NULL GeneID:511673 17 GENE MMAA NULL methylmalonic aciduria (cobalamin deficiency) cblA type EMBV3_21919 GCATCGCTAACGTTGACCTCGCTGACGTGTTTCGGGAAGGGAGAGACATCATTGAGCAAA Gene GeneID:518659|RPGRIP1L:XM_002694781:586_cdna Constitutive 0 NULL GeneID:518659 18 GENE RPGRIP1L NULL RPGRIP1-like EMBV3_31965 GGAAAGACGAGACACTTCACAAAATCAACGGAGAAAATAATGAATGTCAAAGGAAAAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10792 CTTTGCTAACTAAAACTTCTTGGGGGTCTGGATGGTCAACATCTGCCTGAGAAGGTGCGC Gene BVV0102_135153 + 0 NULL GK000025.2:23104118-23551045 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00129783 TCONS_00231338 TCONS_00249539 TCONS_00066283 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00209830 TCONS_00037672 TCONS_00020157 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00177370 TCONS_00175855 TCONS_00218945 TCONS_00169198 TCONS_00250930 TCONS_00166977 TCONS_00008224 TCONS_00174963 TCONS_00137878 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00157439 TCONS_00189806 TCONS_00038458 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00155780 TCONS_00124585 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00178325 TCONS_00161667 TCONS_00167260 TCONS_00010054 TCONS_00040836 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00110323 TCONS_00156838 TCONS_00130290 TCONS_00063486 TCONS_00207365 TCONS_00057310 TCONS_00249772 TCONS_00010471 TCONS_00088088 TCONS_00021595 TCONS_00157613 TCONS_00117619 TCONS_00199424 TCONS_00155778 TCONS_00080066 TCONS_00059708 TCONS_00161835 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00249569 TCONS_00249087 TCONS_00223554 TCONS_00070810 TCONS_00107832 TCONS_00222114 TCONS_00131550 TCONS_00199037 TCONS_00110403 TCONS_00019199 TCONS_00122479 TCONS_00122686 TCONS_00157036 TCONS_00180345 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00218178 TCONS_00252353 TCONS_00224113 TCONS_00007677 TCONS_00197928 TCONS_00242131 TCONS_00116100 TCONS_00250720 TCONS_00169197 TCONS_00124846 TCONS_00010366 TCONS_00152744 TCONS_00038381 TCONS_00222766 TCONS_00242885 TCONS_00209846 TCONS_00023373 TCONS_00252810 TCONS_00207069 TCONS_00209711 TCONS_00013635 TCONS_00252107 TCONS_00040883 TCONS_00148280 TCONS_00056146 TCONS_00249011 TCONS_00250530 TCONS_00123620 TCONS_00176735 TCONS_00248864 TCONS_00031939 TCONS_00039951 TCONS_00169199 TCONS_00131137 TCONS_00155779 TCONS_00142123 TCONS_00063181 TCONS_00009259 TCONS_00234065 TCONS_00252226 TCONS_00111497 TCONS_00209636 TCONS_00007431 TCONS_00222455 TCONS_00089952 TCONS_00245928 TCONS_00233372 TCONS_00218896 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00251914 TCONS_00085967 TCONS_00063080 TCONS_00199802 TCONS_00207755 TCONS_00197601 TCONS_00250246 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00040740 TCONS_00251804 TCONS_00200529 TCONS_00064619 TCONS_00244653 TCONS_00135546 TCONS_00115148 TCONS_00250726 TCONS_00221884 TCONS_00122313 TCONS_00177995 TCONS_00020023 TCONS_00251907 TCONS_00109858 TCONS_00218898 TCONS_00218552 TCONS_00007359 TCONS_00166449 TCONS_00031910 TCONS_00251929 163 XLOC_107421 XLOC_069855 XLOC_078496 XLOC_140827 XLOC_152482 XLOC_040997 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_128341 XLOC_021501 XLOC_010835 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_107144 XLOC_105634 XLOC_132264 XLOC_103305 XLOC_153873 XLOC_101813 XLOC_003782 XLOC_104746 XLOC_084087 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_095894 XLOC_115843 XLOC_022282 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_094822 XLOC_076129 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_108098 XLOC_098554 XLOC_102096 XLOC_005606 XLOC_024650 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_066227 XLOC_095298 XLOC_079001 XLOC_038213 XLOC_125882 XLOC_035109 XLOC_152715 XLOC_006022 XLOC_052875 XLOC_012268 XLOC_096068 XLOC_071785 XLOC_121077 XLOC_048950 XLOC_036490 XLOC_098720 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_152512 XLOC_152030 XLOC_136854 XLOC_042587 XLOC_063742 XLOC_135423 XLOC_080255 XLOC_120690 XLOC_066307 XLOC_009879 XLOC_074034 XLOC_074241 XLOC_095496 XLOC_110113 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_131641 XLOC_155294 XLOC_137409 XLOC_003238 XLOC_119588 XLOC_148795 XLOC_070269 XLOC_153663 XLOC_076389 XLOC_005917 XLOC_092509 XLOC_022206 XLOC_136073 XLOC_149548 XLOC_128357 XLOC_014040 XLOC_155751 XLOC_125588 XLOC_128222 XLOC_008165 XLOC_155048 XLOC_024697 XLOC_090162 XLOC_033949 XLOC_151954 XLOC_153473 XLOC_075172 XLOC_106509 XLOC_151807 XLOC_018184 XLOC_023768 XLOC_079842 XLOC_086548 XLOC_037908 XLOC_004815 XLOC_143544 XLOC_155167 XLOC_067397 XLOC_128147 XLOC_002992 XLOC_135764 XLOC_054733 XLOC_150855 XLOC_142854 XLOC_132215 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_154855 XLOC_052005 XLOC_037807 XLOC_121454 XLOC_126270 XLOC_119262 XLOC_153189 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_024554 XLOC_154745 XLOC_122181 XLOC_039343 XLOC_150512 XLOC_081769 XLOC_069449 XLOC_153669 XLOC_135195 XLOC_073868 XLOC_107768 XLOC_010701 XLOC_154848 XLOC_065762 XLOC_132217 XLOC_131872 XLOC_002920 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_37171 ATGCAGGGTCAAGTCACCGTCATAGTGGGAACGGGGAAAACCGGGAAAGGACTGCTTAAA Gene BVT0102_190650 + 0 NULL GK000009.2:49070739-49714501 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237332 1 XLOC_144686 Coding TCONS_00237332 XLOC_144686 Coding Coding GRIK2 9:48474664-49217639 j TSS177446 6801 1 TCONS_00237332_12 859 16 0.990867782721872 0.00360383890409956 0.00365144245253826 0.0015425030065278 0.00236687275700257 0.00120430508865087 0.000332626697105637 0.00129538076223675 0.00147403789480466 0.00151677354942523 9.81078081026164e-05 0.000110191579090782 1.76987363999985e-05 0.000563039665536333 0.000957041239558835 0.000538130714077175 4.84724496798999e-11 2.25915764150476e-12 4.02031206850409e-12 0.00155747450637442 0.00173051934849415 0.000432689691506558 0 6.98113731220806e-05 3.69755093499551e-06 0.001796246720869 0.00127180973500476 0.00106302130626081 2.2929897433087e-05 3.41125418920909e-05 4.41659632016029e-06 NM_001193063.1 GRIK2 Bos taurus glutamate receptor, ionotropic, kainate 2 (GRIK2), mRNA. 0.0 7481 99.98 0.610351418908984 XM_005266946.1 GRIK2 PREDICTED: Homo sapiens glutamate receptor, ionotropic, kainate 2 (GRIK2), transcript variant X2, mRNA. 0.0 6125 92.50 0.610498456109396 TCONS_00237332_12 sp|Q13002|GRIK2_HUMAN GRIK2_HUMAN Glutamate receptor ionotropic, kainate 2; 0.0 1790 99.88 0.9988358556461 0 coding 0 0 0 0 -0.0272426135435511 0.881453107185252 0.00230152856455713 0.961382124201195 CACTTGTAGCATGATTTAAACAAAAAAGAAAAAGCTAAAATGGCAATTATATATTAGGGGAATCCATTGTTTTTCTTAAGGAATCAGGTTTCTTCAGGGCTCAAAGTAAAATCTAAACATGAGACTCCAGTGGAAAGGTTGGCCAGAAGATTTACTTGGAGGAAATGAAGCGTGGGCAACACTCAGCCTCTCTCCACTGGCCAATGGAGTTTCAGTAGAACTAGTCAGGAAAAGTTTCCTTAAGTAGATAAGAGCCAGAGAAGAGAAAGCCAACAGGGTAAAGGCTCCCACTGTGGGCACCTCCTCTGACACTTCAAGTGGATTTAGACCAAAGAGTGCAGGAAACCATATAATCCTGAGTATGTGTCTTTGAGATAAAAGCAGATACATTAAGTCACTCAAATTTAAATCAAAGAGTGATTGCCTGCATTTCCCATTATGTCAGCAGCATCTTCTCTCTTGTCTGTTTCTTATACGCTTTTTCTATAAGGATAAAATTTATCATCTATCTGGGGCTTTGTGGAACCTGGGTAGGAATGCTTTCACATACTGAGAAAGGGAACCCTTCTTTCCCTCCCCCACCAATACATAGACACACCTGGAGCCCACAGGACTGATAATGAGAAAAGACAATAAGTGGATTCCTACTGTTGTAGTTTTCCTGCTTTCTGCATGCCTTTAGATGGTACTTAAGCACGTTGCTCTTAGCAACAAGAGTCCACAGGAATGCTTGTTTCTTTGGATGAAATTAAATGGGTCCCTGTATCATTGGAAACGTGTGTTCTGTTGCTCTGCTTCAAGCATTGTAAGTGCCACAGTTTGGTAGTTTTGCCAAATATTTTGAGTAGTACAACCTACTTATTTGGAATACTGAGGTGTCTTCTGAACTGTGTTTGTGAATGAGTGTCTTAGTGTGTTTGAGGACTAAGAGGTGGGGAAAGAAGAAAGCTGGGAGCTGGAAAACGACCACCAATACTCTAAAGATTTAATTATTGCTGCTCTGGTCTTGCAGCATAATATTTGCTGAATCATTAGATTGTTACATTCGCTGATCATTTCATATCTTCATATTAAAAATCTTGGCGACTGTAGCAGACTGTGTAGCAGCTTTCCAAAAGAGCTGACACACACACAAAAATACATTTTCCTAGACCAGTGCTTACTAAGAATGTCCGTAAGAAATAGGGGAGTAGGAAAACACCTTCACACCTGTGCCTTGCTACCTTAAACCAACTGACCAGTTTCTAGATAACCTGTTATTTTCTCCATTAACTTCAAACATCTTCCACGCGGAGATCCATTTTCTCTGGTTTGTGACTCGAGTTGAGTGGTGAAGGATTGTGTACATTATAACCACTGGAACATTTCCCTGATGGAGATATTTTGATGCAATGGCGGGAGTTTTATTTTCTTCTGGGAAAAACATGTTCTGAATGAAGTGGAGGTTGGTTGCGTGCGTATGAGCCACTCTTGAGAAATGTTATTTTCAACTTCAGCTGAAAAGGTGAACCAGAGGCTCACCACTGGCCCGGAGCCTTGGAAGGGAAGGGACTCGCTAGTGGAGCAGCTGCCTCTGGGGCGCGGGTGAGAAGGTGGCCTCCAGCCCCTTCCCCCTCCGACCCTGGTGTGGCCTCTGCCAGCCGCTCGGCGCCTCTGCAGCGGCACTATGGCAACCGCGGGCCCAGATCGGCTACCGCCCCATCCTCAGACCCCTTTCCCGTAGGTGGTGGAAAACCACCTTCGTGGGCTTTAAGCAGTCCTTTCCCGGTTTTCCCCGTTCCCACTATGACGGTGACTTGACCCTGCATCCTCCTACCAACGGGTGTGGATAGGGGAGCAGCTTAGGGTACTGTGTTACTTGCCAAGTCCCTCGCTACCCCCGCCCATCTTCTGGATGGATGATCAGTCTCTCGCTCGCTCGCTCTCTGTCTTTCTCACAAACACACTCGCTCGCGCGCCGACAAATGCACTCTCGGGAGGCACGTCCACCACTCTGGCACAATGACTCCTCTTTGGTTCCCAGGAAAACTTCCTGCAGTCGCGTGCGCCAGCGCCTGTATCCCGGCGTCCCCTCCCCCTCGCCTGATCTAGGGCTGCACACCCGGGCCTGCTTCTCCGAAGATGCTTTGCAAACACCTCTGGGAGACCGTCTCCCGAGCGCCGACTCCAGGGAGCTTTCCCGAAGCTTTCGGGCAGCCCGGAGCGATGGGGAAGCAACCTGAGGATCAGCCTAGGGTCAGCTCCTCGCCCGTGGGCGGGCCGGCGTTGCGCCTCGGGTGGGTCGTGGCGGATTCCCCTCCCAAGATCTTGGTTTGGCCCCGCCTGCCTTCTCCTGGGCGACCACCCAGCGGGCGCGTGCACACGGTGGAGCTTGGACAGTTAGAGGGTTAGTTTCCCCGCTCCAGGTTAGGTCTAACGTTCCGGGGTCGGCGTTTCCATGCGCGGAACTGCCACGCCCCCGCGGGCCCTCTCTGGTGCGCTTCGGCCCCGCAGCCGGCGGCGGGGGCGGGCGATGTAAACGAGGCACCTTTGTCTCCCCGCAGCTGCGGCCCGGCCCAGCCGGCGGTTGGAGGGGCGCAGGCGGCATCCTTCCGTCCCCGGGGGCGTGGGCCCCACTGCCTCGTTCTCCCGAAATGACAGTGGCTCGGAGGTGGTATTTTTGAATATGTGGAATCTGGCCCAATGGGAGCTGAGGAACTTGCATTCAGATTTGCTGTGAATACAATCAACAGAAACAGAACCTTGTTGCCCAACACCACCCTAACCTATGACACCCAGAAGATAAACCTCTATGACAGTTTTGAAGCATCCAAGAAAGCCTGTGATCAGCTGTCTCTTGGGGTGGCTGCCATCTTCGGGCCTTCACACAGCTCTTCGGCAAATGCAGTTCAGTCTATCTGCAATGCTCTGGGGGTTCCCCACATCCAGACCCGCTGGAAGCACCAGGTGTCAGACAACAAAGATTCCTTCTATGTCAGTCTCTACCCAGACTTCTCTTCACTCAGCCGTGCCATTTTGGACTTGGTGCAGTTCTTCAAGTGGAAAACTGTCACAGTTGTCTATGATGACAGCACTGGTCTCATTCGCTTGCAGGAGCTCATCAAAGCTCCATCAAGATACAATCTTCGACTTAAGATCCGTCAACTACCTGCTGATACAAAGGATGCAAAACCCTTACTGAAAGAGATGAAAAGAGGCAAGGAATTCCATGTCATCTTTGACTGTAGCCATGAAATGGCAGCAGGCATTTTGAAACAGGCATTAGCTATGGGAATGATGACAGAATACTACCATTATATCTTTACCACACTGGACCTCTTTGCTCTTGATGTGGAACCCTATCGATACAGTGGTGTTAACATGACAGGGTTCAGAATATTAAATACAGAAAATACACAAGTCTCCTCCATCATTGAAAAGTGGTCCATGGAACGGTTGCAGGCACCTCCGAAACCCGATTCAGGTTTGCTGGATGGATTTATGACGACTGATGCTGCTCTCATGTATGATGCTGTGCACGTGGTGTCTGTGGGCGTCCAGCAGTTTCCCCAGATGACAGTCAGCTCCTTACAGTGCAATCGACACAAACCCTGGCGCTTTGGGACCCGCTTCATGAGCCTAATTAAAGAGGCACATTGGGAAGGCCTCACAGGCAGAATCACTTTCAACAAAACCAATGGCTTGCGAACAGATTTTGATTTGGATGTGATCAGCCTCAAGGAAGAAGGTCTGGAAAAGATTGGAACTTGGGATCCAGCCAGTGGCCTGAATATGACAGAAAGTCAAAAGGGAAAGCCAGCCAACATCACAGATTCCTTATCCAATCGTTCTTTGATCGTTACCACCATTTTGGAGGAACCCTATGTTCTGTTTAAAAAGTCTGACAAACCTCTTTATGGAAATGATCGATTTGAGGGCTATTGCATTGACCTCCTCAGAGAGCTATCTACAATCCTTGGCTTTACATATGAAATTAGACTTGTGGAGGATGGAAAATATGGAGCCCAGGATGATGCCAATGGACAATGGAATGGAATGGTCCGTGAACTAATTGATCATAAAGCTGACCTTGCAGTTGCTCCACTGGCTATTACCTACGTTCGAGAGAAGGTCATCGACTTTTCCAAGCCCTTTATGACACTTGGAATAAGTATTTTGTACCGCAAGCCCAATGGTACAAACCCAGGCGTCTTCTCCTTCCTGAATCCTCTCTCCCCTGATATCTGGATGTATATTCTGCTGGCTTACTTGGGTGTCAGTTGTGTGCTCTTTGTCATAGCCAGGTTTAGTCCCTATGAGTGGTATAACCCACACCCTTGCAACCCTGACTCAGACGTGGTGGAAAACAATTTCACCTTGCTAAATAGTTTCTGGTTTGGAGTTGGAGCTCTCATGCAGCAAGGTTCTGAGCTCATGCCCAAAGCGCTCTCCACCAGGATAGTGGGAGGCATTTGGTGGTTTTTCACACTTATCATCATTTCTTCGTATACTGCTAACTTAGCCGCCTTTCTGACAGTGGAGCGCATGGAATCCCCTATTGACTCTGCTGATGATTTAGCTAAACAAACCAAGATAGAGTATGGAGCAGTAGAGGATGGTGCAACCATGACTTTTTTCAAGAAATCAAAAATCTCCACATATGACAAAATGTGGGCCTTTATGAGTAGCAGGAGGCAGTCTGTGCTCGTCAAAAGTAATGAAGAAGGAATCCAGAGAGTCCTCACCTCTGATTATGCTTTCCTAATGGAGTCAACAACCATCGAGTTTGTCACCCAGCGGAACTGTAACCTGACACAGATTGGTGGCCTCATAGACTCCAAAGGTTATGGCGTCGGCACCCCCATGGGTTCTCCATATAGAGACAAAATCACCATAGCAATTCTTCAGCTGCAAGAGGAAGGCAAGCTGCACATGATGAAGGAGAAATGGTGGAGGGGCAATGGGTGTCCAGAGGAGGAGAGCAAGGAGGCCAGTGCCCTGGGGGTTCAAAATATTGGTGGCATCTTCATTGTTCTGGCAGCCGGCTTGGTGCTCTCTGTTTTTGTGGCAGTGGGAGAGTTTTTATACAAATCCAAAAAAAACGCTCAGTTGGAAAAGAGGTCCTTCTGTAGCGCCATGGTAGAGGAACTGAGGATGTCCCTGAAGTGCCAGCGTCGGTTAAAACACAAGCCACAGGCCCCAGTTATTGTGAAAACAGAAGAAGTTATCAACATGCACACATTTAACGACAGACGGTTGCCAGGTAAAGAAACCATGGCATAAAGCTGGGAGGCCAAACACCCAAGCACAAACTGTCGTCTTTTTTTCCAAACAATTTAGCGAGAATGTTTCCTGTGGAAATATGCAACCTGTGCAAAATAAAATGAGTTACCTCATGCCGCTGTGTCTATGAACTAGAGACTCTGTGATCTAAGCAGTTACAACGATCAGACTTGATTTATAAACATCATGGATCAACCAAGTTACACGGGGTTACACTGTTTATCATGGGTTCCTCCCTTCTTCTGAGTGAATGTTACATAACCATTTTGTGGCTGGTTTCAAATGCAGTCCAGGAAGAAATTACAGGTTCCTTTTGAGGTTCAACTGTTGCCAGGAGATGGAATATCAATGCCCCAAGGGTAACCAGAGGAAAAAAATCATTAAGAATAAAAATACTTGGAATCAGCAAAAACTGTAGTGTTACAAGACACAGTTAAGTCTTCTGAACACCCAGATAAGAGGGTGATGATGTCACTAGCCCCCAGCTACTCAGTATAATGGTCATCTGAATAGACAATATGTGCTTATAGGATGTGAAGAAATGTAAAGCAAAACAAATCTGAATTTCATGGCAAGTGGAATATAAAGCAGATCTTCATCAGTGTCTTTCTTTCTTTTCTTTTTGTTTTTTTTTTGACAGTCTGTGTCACTGATTGAAATAGAAGTGTCAAATTACCAAGGCAATAATGTTTTTTCTTATATTCACTGTGGCAGGAGATTTAACATGTATCTCTACCAAATCCCTACCTATTCCAGCCACCCTTTCCCCAACCTCACACCAAGAATAAAAAAGCAACAGTTGGTTCAGAGATTCTGAATTAAAATGGATGATGTTTTGCAATCTTTTTCTTAAGCTGTAAAAGAGGGCTGAGTATTGATAGTTCTGTGGAAGACTGCAACTTTCATTCTAACATTCAGACATGTTAATCCAAAACCTCCTTCCTGCTATAAATGAACTTGATGGAGCCTGGGCAGATCTCAGTGAAAGGAGAAAGGGGACTGGTCATCTAAAGAGAAGTATGTGTGGTGAACTCTGACGTGGACTGCATTTATCAATACAGTCACAATGTTAAATGAACAAAATTCTTGAGCAGTTTTTTTCAAAAAATGTTCAGGTTTATTTGTGGAAATGCAAGATTTCTATGAAAATAGTTTTTGTATGGAAATTTTTGTAATACTTTTTATCAACAAAATAAGAACATGCGTTCCTGTCAGGGGTGTGATGTCGAGCATGAATGGTAGTGCGTGTGCACCACCAACGTTTGGTGAAAACTATTTTTATCAAGAAAAAAAGGAGTCATAGAAGAGAAATATTTTCAAGTTAGATAATATAAAAGCTAGGTGCACTACCACCTCTGCTTACCATGCCACACCCCTGGTTTCCACGAGGCTGATAACATACTGTAATGAACAATTGTGTGTAAAATGGTAAAAGACACAGACCTCTTGACAACATTGTGATAACAGTTGAGTGCACACAGTTTGCTGTTGAATCCAATGCACAAAATTTAAAAAATCATTAAAATTATGTCCATTTTA EMBV3_40513 TCTCTGGGGGTCAGAGTGAAGAAGAGGCATCTCTCAACCTCAATGCTATCAACCGATGCC Gene GeneID:504584|ALDOC:NM_001097984:55_cdna Constitutive 0 NULL GeneID:504584 19 GENE ALDOC NULL aldolase C, fructose-bisphosphate EMBV3_14571 TTGTCAAGGCTCTGAAACCTTAGTTGAATGGTGGCCATGGGCTAGCTGTTACCACCCACA Gene BVT0102_017527 + 0 NULL GK000007.2:50849170-50941046 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00638 GAAGCTTTTGAGGATGACGAGGAAGAGGTCAACGAGTAGAGGCATGTCCTGCCTTGGACA Gene GeneID:534206|TUBB6:NM_001046373:149_cdna Constitutive 0 NULL GeneID:534206 24 GENE TUBB6 MGC137802 tubulin, beta 6 EMBV3_11725 GCAGAACCAGGAGATGCAGAGAGAGTCGGCAGCTGGCAGGAGGCCCCAGTGGAGGAAGAA Gene GeneID:505686|LAD1:NM_001075219:49_cdna Constitutive 0 NULL GeneID:505686 16 GENE LAD1 MGC139938 ladinin 1 EMBV3_37969 AGGAGGGTCATCAGAAAGTTAAGCGTGGAATCACCATGTGTCCCAGCAATCCCTCTACAG Gene BVV0102_049705 + 0 NULL GK000007.2:45126446-45130770 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213131 TCONS_00213135 TCONS_00213133 TCONS_00213134 TCONS_00213129 1 XLOC_130386 Coding TCONS_00213133 XLOC_130386 Coding Coding WDR18 7:45121039-45130008 j TSS159754 4775 1 TCONS_00213133_3 340 0.162513089005236 8 0.468443354148082 0.00179600450483324 0.000652400358018949 0.00165162712769088 0.00090394770931965 0.000416131976155739 4.32210725590729e-09 1.19106604748161e-05 0.000275597313107308 0.000479211854242181 0.000109320874450593 0.000395734026350603 0.000196539685035276 1.3638680576751e-05 0.000485045430667692 0.000220711701644731 0.00361822492310034 0.00207290843245018 0.00398827681607412 0.000729125897746029 4.74013241591914e-06 0.000321236741070151 0.00298776770620352 0.000747419598079592 0.0017075412533398 0.0012812532114358 1.09459898632467e-08 1.65591689136586e-09 0.000793578245869738 0.00055887236228204 8.86223421880588e-08 NM_001034588.1 WDR18 Bos taurus WD repeat domain 18 (WDR18), mRNA. 0.0 1595 100.00 0.184921465968586 NM_024100.3 WDR18 Homo sapiens WD repeat domain 18 (WDR18), mRNA. 0.0 820 85.80 0.147225130890052 TCONS_00213133_3 sp|Q3SZD4|WDR18_BOVIN WDR18_BOVIN WD repeat-containing protein 18; 1e-167 479 99.57 0.685294117647059 2 coding 1 0 1 1 -2.18102354448469 0.0374232084499156 0.011798458133578 0.817480138491233 GAAGGCAAGATGGCGGCGCCCATGGAGGTAGCCGTGTGTACGGACTCGGCGGCCCAGTTATGGAGCTGCGTTGTGTGGGAGCTGCACTCTGGCGCCAACTTGCTCACGTACCGCGGAGGCCAGGCAGGGCCCCGCGGCCTGGCGCTACTCAATGGCGAGTACCTGCTGGCCGCACAGCTGGGCAAGAACTACATCTGTGCCTGGGAGCTGCAGAGGAAGGACCAGCTTCAACAGAAGATCATGTGCCCGGGACCAGTCACCTGCCTCACCACATCGCCCAATGGCCTCTACGTCCTGGCAGGGATCTCAGAGAACATATACCTGTGGGAGCTGTGGGAGGTCTCCTCAGGTGAGCTGCTGCTGTCCGTACTCTTTGATGTGGGCATCCTGGCCGTGACCATGGACCTGGCTGAGCATTACATGTTCTGCGGCGGCAGCGACGGCTCCATCTTCCAGGTCGATCTCTGTACCTGGCCCGGGCAGAGAGAGAAGAGCTTCCAGCCAGAGCAGGAGCACGGGAAGGTGTTCAGAGGGCACAGGAACCAGGTGACCTGCCTGTCGGTGTCCACGGATGGCAGCGTGCTGCTATCGGGTTCCCACGATGAGACCGTTCGCCTCTGGGATGTACAGAGCCAGCAGTGCCTCAGGACAGTGACCCTCAAAGGCCCCGTGACCAATGCCTGCATCATGCTTGCACCCGTCAGCATGCTGAGCTCCGACTTCAGACCAGGCCTGCCCCTGCCCCACTTCAACAAGCACCTGCTAGGCGCAGAGCACGGGGACGAGCCACACCGCGGGGGCCTCATGCTGCGCCTAGGCCTCCACCAGCAGGGGTCAGAGCCCAGCTATCTGGAGCGGGTGGAGCAGCTGCAGGCGGTGATGTCCAGCACACTGGAGAAGAATGTCCTGGGAGGCCAGGACCAGCTGCGGATCCGGGTGACTGAGCTGGAAGATGAGGTGCGGAACCTGCGCAAGATCAACCGCGACCTCTTTGACTTCTCCACACGCATCATCACACACCCAACCAAGTGACACGTCTGGACTCGCCCTCAGCCAGCAGAGCCCATGGCCCAAGCCTGTCCTCTGCAAGGTCCTATCGCTTGGATTGGCACCCCCACCAGGGTCTCAGTCCAGGGTTGACTGGCTGCCCTGCCGTGACCTGCCGTGTCACATGAGTGCTCTGCTATTTCTAACAAAAGACCTAAAATCCTACCTTTCGGCCTCCTTGTGCCCCCGCTGGGCTGAGGACCCTCGCCGTGGGACCTGCCAGGGGGATTTGCCACAGCTATCACAGAGTCCGAGTCCCAGACATAATGTCTAGAAGCCTAGGTTCTCACCTGCTCCCTCACCTGCCAGCCCTGTGCAGCTCCCAGGGGGCCAGGCTGTGGGCCAGGTCCCCAGGGCAAGAGTAACTCAGGGACAGCAGGGTGGTTACACCAGGCCTGTCTCCCCAGCCTGGCTCTGGGCAGCCGACTCGGGTGGCAGCCAGTTCTGGGCCAGAGTCATCTCGACCAGAAAGTTCTTGGTGTCAAGGGCCCAAGAGAAGCCAACCACTCCTCCAGCACCACACATACATATACACTGCACGGTAGATGGGGACGCCGCTAGCTGCCAGCCAGAACCTGGAGCCCAGCCCAGACTTGGGCCCTAAGCCTCCCATGGAAGCTTCCAGAAAGTTGCCCCTAAGTGACAGTCTGTTTAATGGTCCAGAAAATCCATGTGACTTAGCCAGTGCTATAGTAACTGCATCTCCTTCTTTTAGCTGATGGGTGTTCTCTCCTGGGGCCCTGCAACCCCCTCACAGCCCACCTTGCCCTCACACCTAGACAGGTTTACTTGGGGCTGTCAGGTGAGGAGTCCTGCACGTTGCAGTCACCCCACACAGAATAAGGTTCCAACAGGCTCTGGGCTCCTGGTTGGTCCCTGGCAGCAGGGTGGGGGAAGGGGACCTGGGGGCTCAGTGTTCCCCTCCTCGCCCCTTGGTCTCCAGGAGGTCTGGAAGGTGGGGAGGGCATCAGGGTTGGCTGAGGCTCCCCCAGGGCCTAGGGCCACCTCTCCTGCCTGGCCCCATGTCCAGGCGCTGCCATCCTGTGCCTGGTGCTTCTCTGCACCCCGGCCATCTGCACTCAGCTCATAGTTCAGTGACTTGGGAGGAGATGCTGGTTCTGGAGACCTGGGTACTGTTCTCTGTATCTGGTCAAGTCCCAGGCAGGAGCTGACAGGGGTCCAGCCTCTGGGGGTCACCTCCACTGGCTCAGGGTTCTTCCCTCAGCAGCAGGGATACTGTTGTCACTGCCCAGAAGTTCCGGGGTGCCCTCAGCACAGCTCTGGACCTTCAGCTGCTGACTTGGGTCCTGGGGTCCCTCCTGGCTTGCCCACCCCATCTGTGGCTGCAGCTGAGGGGACCTTGGCCACTCATGGCTCCTGTGGGGCTGAGGGTGTGCACCCCTGGGCAGGGATGGTGGGGTCCCACCCTGGGGTGGTCACTGTGATGACTCAAGCCTGAGGTAGTCCCAGCAGGGCCTAGGGAGAGCTTTCAATCAATGTGCAACCAGCCTCGCCCGAGCTCTCCTTGCTACCAGTCCATGGGGGCCTGGAAGGTCCCCTTCCCCCTCCACAGGCCACACAGTCCAGAGAAGGTCCCTGGTAGGCTGGAAGGGCTGGAGCCCACTGGCCCCTTTCCCTGAAATCCCCACATGGCCTCAGACAAGCCACACCTCACCCTGAGACTGTGTTGTCACTCAAAGGAAACGTGTACCTCCTTGGTTCGTGAGGAGTTCAGGAGCCAGTGTGCAGCTGTACGGGTGCCCAGCACAGTCAGTACTCCTGTTGCTTGTCTGAGAATCTGTAGAAATCCAACCTGACCCTGAATCCTGGGCCATCACTGCCAGAAGGGGAGGTGTAGACTGCATCTGACATTCTCAGGTGACTGAGTTGATGGAAACCTCTCCTGGCCAGGACAGCCATTATTTAAAAAACAAGTGTCAGAATGTGGTGGAGGTGTCTTCCGAGCACTTGTGCATCATTGGTGGGAAGGTGAAAGGGTACAGCTATTCTAGCAAATAGGAGGGTCATCAGAAAGTTAAGCGTGGAATCACCATGTGTCCCAGCAATCCCTCTACAGGTACCTTGCCCACAGAAATGAAAGCAGGAGGCCTGAAGAGATGTTTACACACCCGTGTTCACATCAGTGTGATTCACAGCAGCCAAAGAGTGGAGACAACCAAATTGTCAAAGATGATGGATGAGTGAGTGGTCCTTTTGCATGGTGGAATATTACTCGGCCTTTAAAAAGAGATTCTGACACCTGCTACAACCTGGTTGGACCTTGAGGATGGACATAATGCTTAGTGAAATAAACCAGACCCAGAAGGAGACACACTGTCTGATTCCATTCACTGGAGGTCCCTAAAGGAGTCAGATCCACAGAGAAAGTAGATGGTGGGGCCAGGGGCTGGTGGAGGAGTTGGGGAGTGTTTCATGGGGACAGAGTTTGTTTGGAAAGATGAAAAAGTTCTGGAGATGACGGTGGGGCTGGTTGCACAACAATGTGAATGCGCTAAATGGCATGAGCTGTAGACTCTAGAAATGGTTGAAATGGTGAATTTTGCATTATATATATTTTACTACATTTAAGGAAAAAACCTCGCCTGTCTTTGTGTATGATGTGAACTACTACCAATGCCCTGTAAAGCTGGGAGCTGAGGCGCAGAGGCCAGGCGCCCACCTCGGGTCACCCAGATGGGGGCAGTCCCAGTTTCCATCAGGTCCCTTCTTCACTGGCCCAGGAGATGGGGAGATAGTGGCCAAGTGGGCCTGGGGGGAGGGGAGATGTGGGGGCTCCCGGGGCTGCCCCCACATGAGTCCCAGGAGGGCCTGAAGAGCCTTCTGGTGTGTGCCTGCTTCCTAGAACCAGCCCTAGCGATGTCTATTGAATGACTGTGCTGAGGGCTATGTTAGGGTGAGGAAGTGTTCCTCCCCAGGCTGGGTCCCTATTTTGGAGGACTCATGCTGGCAAAGGCATCTCTCCCCATGGTGGAATAATGTCCTGGTGGTCCCTGAGGACCCTTTGCAATTTAGCACCTTACCCAGAAGAATGGGGTAGGGGAGGGCTCTCTGGTATGACCGTCATTGTCCTGGGATGCCTGGCCAGGTGGCTGGATGAGGTGGCCTTGTCACCTGGAAGCCAGTCAGCCACCCAGCCCTCATTAGTCATCTCAAAATTCAATCTATGCTGCTGGCATTTTTATTCATCTAATGGAGTTTGTTCCCTGCCTCTCGAACACTGGCTCCAAAATGAGATGATTTTTTTTTTTTTTTTTTTTTTGGCGTGTGAAAAAAATAACTGAGTGTAGACTCATCCATTAGAGCTGGAATGATCTGGACAGATCTGCTGCCCTGTGCCCTGTGGGGTCTTGCCCTCCTGTGGAGGCTTTCTCTGCTCGCCCACCTGGGATGGGAGTGGGAGGAGTCCATGCACTGCACCGCTGGGGCCCTTGCTTGACCAGTGTTCATTGAGCATCTGCTGCATGCCAGGGGCCGTTTCTCACGGGGAGGCACAGAGAACGTAGGAGGCTGAGGGATTGGTAGGTGGCGGGGAGCTATGGAAGGTTCTAGAGCAGTGGAGAGTCATGTAATCAAGTGTCCTTGTCCAAACAGTTGCTCAAGCAGAGTGCCTACTGTGTGCAAGCACTGGAGACACAGCATTAAACAAGCCAGGCTCACTCCTGTCTCCCAGAGTTGACCACTAAATAAAGTAAATAAAGCAAAAAAGA EMBV3_06569 TACTTGCTGAAGAGACTTTCCGTTATATGAAGGGATCGTGATCTGGAGCTAGCTGCTCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23728 CAGGAGCCTGAACAGAAACGCAGCAAGCTGGACACAGATGGAGAAGAAGATGGGAGCTTA Gene GeneID:618572|FLYWCH2:XM_002697932:595_cdna Constitutive 0 NULL GeneID:618572 25 GENE FLYWCH2 NULL FLYWCH family member 2 EMBV3_18614 AACCTTGACTGAAAAATATCAAAGCAAGTAATTTGTGTCTCCTTGTACAGCTCTGTGTTC Gene GeneID:780855|PPIP5K2:XM_002689420:22_cdna Constitutive 2 NULL GeneID:780855 7 GENE PPIP5K2 HISPPD1 MGC143083 diphosphoinositol pentakisphosphate kinase 2 EMBV3_12498 CCTCAGCCTCTGCGACTTCTGCAACCTGGACCTTCTCCAGGCGGGGCACTGGTTAGGGCT Gene GeneID:100336928|LOC100336928:XM_002691712:84_cdna Constitutive 0 NULL GeneID:100336928 11 GENE LOC100336928 NULL neural proliferation, differentiation and control, 1-like EMBV3_02906 GCAGACTCAGTTAGGCCTGCGTTTTGTGCTCTTCTCAGGTCCGAGCAGCTCAGGTGATGA Gene BVV0101_058718 - 1 EMBV3_30192 GK000016.2:61928737-62068138 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00249639 TCONS_00115686 TCONS_00252353 TCONS_00007677 TCONS_00064812 TCONS_00116100 TCONS_00071186 TCONS_00148672 TCONS_00250720 TCONS_00080603 TCONS_00010366 TCONS_00071860 TCONS_00124846 TCONS_00037672 TCONS_00136620 TCONS_00153678 TCONS_00222766 TCONS_00129573 TCONS_00207069 TCONS_00129528 TCONS_00177296 TCONS_00209711 TCONS_00009933 TCONS_00218945 TCONS_00040883 TCONS_00148280 TCONS_00008224 TCONS_00011362 TCONS_00056146 TCONS_00021569 TCONS_00109898 TCONS_00123620 TCONS_00248864 TCONS_00178107 TCONS_00020400 TCONS_00039854 TCONS_00031939 TCONS_00239419 TCONS_00131137 TCONS_00021878 TCONS_00238933 TCONS_00186525 TCONS_00178417 TCONS_00009259 TCONS_00062744 TCONS_00199639 TCONS_00252226 TCONS_00233560 TCONS_00209636 TCONS_00007431 TCONS_00251707 TCONS_00130084 TCONS_00064462 TCONS_00178325 TCONS_00161667 TCONS_00233372 TCONS_00153218 TCONS_00240534 TCONS_00140840 TCONS_00209032 TCONS_00130290 TCONS_00219749 TCONS_00207755 TCONS_00063080 TCONS_00199802 TCONS_00089010 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00010471 TCONS_00021595 TCONS_00157613 TCONS_00088088 TCONS_00117619 TCONS_00199424 TCONS_00064619 TCONS_00059708 TCONS_00208264 TCONS_00020345 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00116665 TCONS_00249569 TCONS_00249087 TCONS_00223554 TCONS_00066275 TCONS_00211316 TCONS_00251907 TCONS_00107832 TCONS_00222114 TCONS_00199037 TCONS_00110403 TCONS_00074566 TCONS_00115416 TCONS_00019199 TCONS_00218898 TCONS_00007359 TCONS_00111731 TCONS_00031910 TCONS_00180345 TCONS_00251929 103 XLOC_107421 XLOC_152582 XLOC_069855 XLOC_155294 XLOC_003238 XLOC_039536 XLOC_070269 XLOC_042958 XLOC_090552 XLOC_153663 XLOC_049487 XLOC_005917 XLOC_043630 XLOC_076389 XLOC_021501 XLOC_082831 XLOC_093441 XLOC_136073 XLOC_078286 XLOC_125588 XLOC_078241 XLOC_107070 XLOC_128222 XLOC_005485 XLOC_132264 XLOC_024697 XLOC_090162 XLOC_003782 XLOC_006913 XLOC_033949 XLOC_012242 XLOC_065802 XLOC_075172 XLOC_151807 XLOC_107880 XLOC_011077 XLOC_023671 XLOC_018184 XLOC_146085 XLOC_079842 XLOC_012551 XLOC_145599 XLOC_112577 XLOC_108190 XLOC_004815 XLOC_037471 XLOC_121292 XLOC_155167 XLOC_143042 XLOC_128147 XLOC_002992 XLOC_154648 XLOC_078795 XLOC_039186 XLOC_108098 XLOC_098554 XLOC_142854 XLOC_092983 XLOC_147198 XLOC_085269 XLOC_127543 XLOC_079001 XLOC_133068 XLOC_126270 XLOC_037807 XLOC_121454 XLOC_053796 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_006022 XLOC_012268 XLOC_096068 XLOC_052875 XLOC_071785 XLOC_121077 XLOC_039343 XLOC_036490 XLOC_126777 XLOC_011022 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_070831 XLOC_152512 XLOC_152030 XLOC_136854 XLOC_040989 XLOC_129826 XLOC_154848 XLOC_063742 XLOC_135423 XLOC_120690 XLOC_066307 XLOC_046320 XLOC_069586 XLOC_009879 XLOC_132217 XLOC_002920 XLOC_067631 XLOC_018155 XLOC_110113 XLOC_154870 Coding TCONS_00233560 XLOC_143042 NonCoding NonCoding - 8:92837961-92838349 - TSS175064 388 1 TCONS_00233560_1 87 1.00257731958763 1 0 0 6.47449892410887e-06 1.45753048573501e-05 2.14024172268101e-05 1.06039044869753e-06 1.02436013452191e-06 0 6.24283151548598e-06 1.17319659146115e-05 8.83699995848118e-06 5.89995753792029e-06 9.61796768479136e-06 5.54631235203282e-06 4.45978395891205e-06 1.502533153669e-05 0.000192867842721031 0.0856848692931864 0.000875165884924454 9.24088388757177e-06 1.15841318822913e-06 1.30400914292684e-06 9.09073043177422e-05 6.33333360973377e-06 0.000103798968979324 0 4.8422483223872e-05 5.37684084509171e-06 1.48533757374075e-05 3.22925558412209e-05 5.89741173966195e-05 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-25 120 81.45 0.31701030927835 0 noncoding AAGCTTGTGTCGGTGTTCTGATGGGTGGAGCTGTATTTCTTCTCTTTGTTCAGTCGCGCTGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCGCAGTGCCTCAGCCACACTGGGTCTGCCCCCGCTCACGGCGCATGTAGCCTCCCTGCCCACACTGCTCGGGCTCTAGGTTGTTCTGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGTACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGAGTTTTGTGCTCTTCCCAGGTCTGAGCAGCTCAAGTGATGAGGTGTTTGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCAC TCONS_00228645 . 5' 8495 TCONS_00228645 . 5' 8495 EMBV3_04182 TGGTTCCATCAAGACTGCACCCAGGCCTTACAGTCCAACCTTTTTCTGTGTCTGGCTAAT Gene GeneID:507307|USP9X:XM_002700207:139_cdna Constitutive 0 NULL GeneID:507307 X GENE USP9X NULL ubiquitin specific peptidase 9, X-linked EMBV3_30416 TGTCAGAGTTCAAAAGGGCAGCTCAGCAACAAGAAGATCAGGAGCATGAGGAGGAAGAGG Gene GeneID:534155|IGBP1:NM_001104988:41_cdna Constitutive 0 NULL GeneID:534155 8 GENE IGBP1 NULL immunoglobulin (CD79A) binding protein 1 EMBV3_11234 AAGAGGCCAGTTTGGAGCTGAAGGTGGCAGAGCCCTTCTTCCCCCAGGCCTCTCCCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26869 CTTCGTCAGGATGAAGTCAGCGCTCATCATCGAACAGCGCGAGCTGGAAGACAAAATACA Gene GeneID:790278|SHROOM2:XM_002700457:9_cdna Constitutive 0 NULL GeneID:790278 X GENE SHROOM2 NULL shroom family member 2 EMBV3_16149 TGGGCTTGCAGAGTTCCCTTATTCTGGGAGTTACAATGCTTTTATCGTTTCAGGCTTCAC Gene GeneID:512479|HNRNPR:NM_001082608:146_cdna Constitutive 0 NULL GeneID:512479 2 GENE HNRNPR MGC143346 heterogeneous nuclear ribonucleoprotein R EMBV3_12665 CTGTACCATAAAGGATGTCTGTCTTCCAATGAGAGAACAAAGCAGAATGGAACTTCAGTC Gene GeneID:514405|PLK4:NM_001083427:20_cdna Constitutive 0 NULL GeneID:514405 17 GENE PLK4 PLK-4 polo-like kinase 4 (Drosophila) EMBV3_01653 GACGATGTGCGGCGGATGAACAAGCGGCAGTGGCAGCATGGAACCTGCATTTCATAGAGG Variant GeneID:282078|SEC11A:NM_174465:74_cdna 140^249 1 EMBV3_33217 GeneID:282078 21 GENE SEC11A SPC18 SEC11 homolog A (S. cerevisiae) EMBV3_08831 CCCAATTCCACCCGGGACAGTGGTACTGATTTTGGGACGTAATAACTGCACAATGAGAGG Gene GeneID:100336014|LOC100336014:XM_002692523:55_cdna Constitutive 0 NULL GeneID:100336014 14 GENE LOC100336014 NULL protease-like EMBV3_30427 TCCACCCAGTTGTGATTCTTCCCTGAACTCCAACCCCCATTCACGCATCCACTCCACCCA Gene BVV0101_022514 + 0 NULL GK000025.2:42310479-42316374 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145703 TCONS_00145702 TCONS_00145705 TCONS_00145704 1 XLOC_088905 Coding TCONS_00145702 XLOC_088905 NonCoding Coding COX19 25:42313752-42317944 j TSS109124 3622 2 TCONS_00145702_12 159 0.247377139701822 2 0.136244333094727 0.000495418359865213 0.000167696719877407 0.000345227110939693 0.000150009184911721 0.000231870938080952 0.000106300341480067 0.00013077177218771 1.47739471068759e-05 0.000256574595902654 0.000143522189420165 1.32019494326989e-05 2.88309792579072e-05 2.03148518454657e-05 0.000871477520127457 6.86785576792831e-06 0.00134845111336187 5.05265407460498e-05 0.000746509639573546 0.00041251932912632 0.000896692628254597 5.30614934300165e-05 0.000458292057165248 0.000412983806694072 0.000311709310813708 0.000147724331054733 0.000250048198067404 0.000532965518754405 0.000177527935450286 9.93426142344173e-05 0.000413581412558462 XM_005225000.1 COX19 PREDICTED: Bos taurus COX19 cytochrome c oxidase assembly homolog (S. cerevisiae) (COX19), transcript variant X1, mRNA. 0.0 872 100.00 0.133075648812811 NM_001031617.2 COX19 Homo sapiens cytochrome c oxidase assembly homolog 19 (S. cerevisiae) (COX19), mRNA. 2e-91 342 87.06 0.0786858089453341 TCONS_00145702_12 sp|A8E4L1|COX19_BOVIN COX19_BOVIN Cytochrome c oxidase assembly protein COX19; 1e-42 140 93.15 0.452830188679245 0 noncoding 0 0 0 0 -0.575878786389503 0.00541415628472049 0.0246845280149345 0.820009733427226 GGCCCCCAAGACCCAGGCCCAGCATCCAGCCACGCGTGCTCAGTCCTGAAGGGCTTCTCTATTCTGAGGTGTGGTGGCCCCAGCTGATAGCCCATGGGGCCGTCTCCACGCAGCCTGCCTTCTCCCTGCGTTTCGGAGCACAGTGGATCACTGCTGTCTCACAGTGGTGAGTCTGGGCTGTTTGTTACACAGTGGAAGAAAACTCATACAGGGGCTGTGTAACCCTGGGCAAGGGGCTTGCCCTCCGTGTGTCTCTATGTGTGACATGAAGATAGTAATACCTGAAAACTGCATTCATTCTTCAAAAATCATTTGTAACTTCATTTCGCAGTTTATTTTTGGCCGCACCAAGTCTGTCCCACGCACAGGCTCCCTCTGGTGAGCAGCGGGCTTACTCTTTGCTGCAGCGCTCAAGTCTCTCTCTCAGGGGCTCCTTGTGGTCCGGGGCTGTAGCCCCGCCGGCCTCCGTAGCTGCAGTTCTCAGGCTTTCGAGCGTGGGCTCAGGGGCTCCAAGGCACGTGGAGCCTTTCCCGACCGGGGATCGAAGCCATGTTCCCTGCATTGGCAGGGGGATTCTTAACCGCTGGACCACCAAAGAAGTCTCCCCAAATATTTTTAATTAACTAATTAATTAAATTTTTGGCTATGCTGCATGGCTTATGGGATCTTAGTTCCTCAAGCAGGAATCGAAGCCAGGCCCCAGGCAGTGAAAACATCAAATCCTGACTACTGGACTGCCAGGGAATTCCCTCTTCAAAAGATACTAACTGAGCAGCTGCTGTGTGCCAGTCACTGTGAGCCCAAGTAAAGCAGCCCAGCATGTAAGAGGGTTTCCAAAAGCAGTATTCCCTGCTTTTTGACCTAAACATCTAATGAACTGCTAAACATCTCCTATGAAGCAATAACTGCTTGGCAGGCTGACACCTCCTGGTCACTGGGCCTCGGGGCTTCAGGGGTCTCCCAGGGCTGCCTCACAGAGAGGAGAGGTGTGGCAGCCTGGGTGGGGAGGAGCTGTCCCTCCCATCACTAAGTGGTGGATCTAGTCGAAGGGAAAGGTGCTATTTTCGAGGAAATAAAGGCTTCTATTGTTCACAGCCCTGGAACATTAATGAGTAACCCCGGGGCCCCTGGCTGCTGTGGTGTCAACAGTTGATATGACGGATCGAGGAACAGGCACAGCTTCCTCCTGCATTTGCTGTGGGCCCAGAACCCCAGGCCAGCCCAGGCCCAGGCGACAGGGCTGGGCTTTCCCTGCGCCGCCATGGGCCCGCCCTGCGGGGCCCTCCTGTTGGTCTGCTGACTTTGGTGGAGCTCTGGGCGGGCTCCCGACAAACAGGGTGGAATCCCGCCTCAGGAGTGCAGTGCGCCACGGGGGACCTTGCGAGTGGCTGAGGGCATACTGGATGCCTTCTGCAGAAGGGGCATCCGACCCAGGCCCTGTGGGGAGGGAGTGCTGCTGGGACTGGTGGGCAAGTCCCCGACATTGCAGGGGGCAGTGGTGCTGGGCCTGGGGGGAGACTGCTTGTCCAGGGGGCCAGCTGGTGACTCTGTGGTCCTGAGCCCCCTGTGTGCTTATGACTAGGGTCTGGCAGCACGTGGCTGGCGTCAGGGACCGCTACGTGGGTGGAGTGGATGCGTGAATGGGGGTTGGAGTTCAGGGAAGAATCACAACTGGGTGGAGGGCGGGCGGGCAGCCACCCACCTCCATCAGCTCTGCCCAGGGTACAAGGTTGGGAGGAGCCCTGCTGCAGGGAGCTGGTGGCCCCCGACCCAGCCCTTTCCCCGTTTTCACTGTTGCTGTTTTTAGTTTTTACTGTTTACAATAATAAGTTAAATAATATATTTAATTATCTTATCTGCTGAATTGTGTCCCCGGATTCACATGTTTAAGTCCTAGCTGCCCCTACCTTAGAATGTGACCTTTCTGGGAACAGGGTCACGGCATATGTAATTAGCTAAGGTGAGGTCATGGGGGTGGGTCCTAACCCAATAAGGGTACATCCTCATGGAAGGATGAAGTGTGGACACAGACACACAGGGAGAGGCCCCGTGGTGAGGCAGAGGGGGTGATGCGCCCACAAGCCAGGCGGCACCAGAGTTGCCGGCAATCCACCAGCAGGGAGCACACACGCGGCTCTCGGATGACTGGCCCCCAGAACTGTGAGAGGAGGAATTTCTGTTGCTCTAAGCTGCCCAGACCTCTGCAGCCTCACGGGGATGCAAAGACCCCCCTCACCCCTGCCAGGGGCAGCCTTCCAGGAGCGTCCACCTGCCCTCTGGGCTTCTTGTGGATTGAAGCTGTGTGTCCTTGGGCAAGTTGCTGACCCTCTCTGAACTTCGTTTCCTCGTCCTGAATAGATGACGGCTGAACCCTCTGCCATTGTGTTGCCTCGAGGATAATAAGAAACCCGCCGCGGAGCAAGTGCCTGAGGGTCCCGGCCTTTCGGAGCCCGGGGGCGGGGCCTGGGTACGAGGGGCGGGGTCTCGCTGCTGAGGGCGGGCCCTGTACCCCCAAGTCCAGGCCCATCAGGGGTGGCTCGCCGCTCGACGTGCTCGGCGCTCCCGCGGGGCCTGCTCCGCGATCGGCCGGCCGTCCTGCGTACGGCGCGCGTCGCGCTGGGAGAGTCTGGGTGCCGCCATCATGTCGACAGCTATGAACTTCGGGTCCAAGAGTTTCCAGCCGCGTCCCCCGGACAAGGGCAGCTTCCCGCTCGATCACTTCGGTGAATGTAAAAGCTTTAAAGAGAAATTCATGAAGTGTCTCCGGGACAATAATTTTGAAAATGCTTTGTGCAGAAATGAATCAAAAGAGTATCTGGAGTGCAGGATGGAAAGGCAAGTACCTGCCAGCCGTGATTTATGTCTTCTCCGCCCACCGTGTCTCCAGCTGAGATGTTTGTCCCAGGAGGCCTCACCCAGGCCTGGCTTCTCCTTGTGTTTGGACCCGAAGGGCTGCCTGCCTGTGAAATTGAGGCATTTCGGAGATGAGTTGTACTCAGAGTTGTTGGCAGCCGTGGGAACCTTTTCTCCAGTGACAGCCTTGGACGTGATTGCATTCCGCACAGTTTTCTCTTTCCAAATGTGTGATGTGTCATTCAGGTTTCACAGTCGTACATCATAAAAACGCTGACTGAGTCAAAAGATTTGTGGGTACAGAGCTTATTTCTTTAAACATTCTCAGAACATAAAAATACATGCTGTTTTGTTCGACGTCCGCTCAGAGCCGTTTGTAGTGTTGACAGGCAAGACAGTGGGCCCGAGAAACGGTGAAAGACAAGTGAGTCTTCCCGTCTCACCCGGAGTTCACAAGACCCACCTCTAAGCAAAACAAAAACTCTTCTAACTGATCCGTTGAGATTTTACTGCAGAAGTACCATTGTAAAGCTTCATCAGGAAAACATGTAACCCGTTATTGTGTGCTTGGGTGGAAACTTTCATTTCTGCCTTTTGAGCCCGTTGTTTGCTCACAAAGGAACCCAGGCCGTCAGAGGCCTTGTCTGAAGACAGGCTGACAAAAAGCAGTCCACTCTGGGCCTGTTTTCAGTATTTCCTTAACAGACTCAGATGTTCCCCTCCCGGCAAGCTCCGCTGTGCTTCTTGGACCCCAGGTGTGTGGAGGGTC EMBV3_19685 CTCTACCCCACCATCTTCCCTCACCCCAGTCCCTGAGATTGTTTTCCCATTTGAGCGTTT Gene BVT0101_004489 + 0 NULL GK000018.2:2085247-2113351 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085174 TCONS_00085175 TCONS_00085173 1 XLOC_051812 Coding TCONS_00085173 XLOC_051812 Coding Coding RFWD3 18:2110280-2145244 j TSS63673 6218 1 TCONS_00085173_7 790 0.0868446445802509 13 0.822526671052255 0.000473044757393819 0.0014705303621523 0.000355869172305044 1.19445035715415e-05 0.00141637043267767 0.000161916568395892 0.000356601574353576 0.000160363009171606 0.000360018444802915 0.000440075893652406 0.000157049605648055 0.000160818446225342 4.11412484152879e-05 0.000413821810242028 2.57598263771514e-09 0.00266812834282494 0.000951238312985647 0.00196654944827496 0.000992300965614193 1.45961117609994e-09 0.000315862350638468 0.00200187897038354 0.00233512099628384 0.00101762781254131 0.000277621779065498 0.000613992633765245 0.000640194390373345 0.000281096154699634 0.000276274789169131 0.000600244251502435 XM_591339.6 RFWD3 PREDICTED: Bos taurus ring finger and WD repeat domain 3 (RFWD3), 0.0 8370 99.98 0.746703119974268 XM_005256022.1 RFWD3 PREDICTED: Homo sapiens ring finger and WD repeat domain 3 (RFWD3), 0.0 2720 76.90 0.568189128337086 TCONS_00085173_7 sp|Q6PCD5|RFWD3_HUMAN RFWD3_HUMAN E3 ubiquitin-protein ligase RFWD3; 0.0 1155 74.18 0.99873417721519 6 coding 0 0 0 0 -0.198256680361941 0.130531696225934 0.000208768359271444 0.996597120483917 AGACGAATAAGTCGAACACGGAAGCTGGGCAACCGTCCTAAGTAAGGGCCTCAGTGATGGCTCATGAAGCAATGGAATATGATCTTCAGGTGCAATTAGATCATGGTGCTGCAGAACAGCCTGCTCCTGCTGAGGTGGTCAGCAGCCAAGGGGGACCACCCCTGCTCCAGCCTCCTCATACTGAGGAGGTCAGCAGCCAGGAGGGACCACCCATGTTGCATCCTGTACTTGCTGAGGTGGTCAGCATCGAAGGAGGACCACCTCTGCTCCAACCCATTCCTGAGGAGCTGATCAACAGCCCAGAGAGAGTGCCGCTGCTTCCGCCTATTCCACAGATACCTATTGATCTAGAGGAAGTGGAGCTCTCAGAAACAGAGACTGTGGGGAACCTCAATCCAGGAGTTTTAGAGGAGTTTAGACCGAGATCTGGTGCTAACCACACTCCCCAAGTGACTTCATTGGATTCAATGAACAGCTTCATCAGTGGGCTGCAGAGACTTCATGGCATGCTGGAATTCCTGCGACCAACTTCAGACCGCAGAGTGGGGCCCGTGAGAGCGAGGAGGAGTAGGAGGAGTTCTGCTTCACGGAGGGCAAGAGCAGGAGGGTCCCAGAGGACAAACAGTGCCAGGTTGAGAGCACCGTTGGATGCTTTCTTTCAAGCGAGCAGGACCCAGCCTCATTCATCAACCACCTCTTATGATTCAGAGACTAGGAATCTTGTCTCTGATGACTTGCAGGTATCAGGTAGTTCTGATTCTGACAGTGACAGCTCCACAGAGTTTGAGGAGGGAGTTGCCCAGGCAGAGGAGCCTGAAGCTGTTGTTTTAGAAGAGGAACTAGAAGACACCTCAACAGACCAAGAAGTTATATGTGCTGGTGGAGAAGACACTGTCCCCAAACAGCAGTCTCCCCAGAAGTCTAACCCTTCTCTAACTTCTGCTTCTGTGGATGAGGAAGAAGGAGACACTTGCACAATATGTTTGGAGCAGTGGACCAATGCTGGGGATCACCGGCTCTCTACATTGCGCTGTGGGCACCTCTTTGGGTACAAATGCATTTCGAAATGGCTCAGAGGACAGACCCGAAAATGTCCCCAGTGTAACAAGAAAGCCAAGCAAAGTGATATCGTTGTCCTTTATGCCCGGACCTTGAGAGCTTTGGACACTAGTGAGCAGGAGCTCATGAAGAGTTCCTTACTAAAGGAACAGAAGCTAAGGAAGAAGGCTGAATTAGACTCGGCACAGTGTCGGCTGCAGCTTCAAGCCCTCACTGATAAATGCTCTAGGCTTCAAAGTCGTGTTCAGGACTTGCAGAAACTTATCGGTCAGGATAAGATCTCACAACAGCCTGGGGGTTCCCAACCACATTTCCTAAGTGGCCTGCCCACCAGCCAGAGTCAACAGAAGTACCATTTCCAGAAGACATTCACAGTGTCTCAAACAGGAAACTGTCGAGTCATGACATACTGTGATGCTTTGAGCTGCCTGGTGGTATCACAACCTTCTCCTCAGTCCGCCTTCCTTCCAGGCTTTGGTGTTAAGATGTTGAGTACTGCCAACATGAAAAGCAGCCAGTATATTCCTATGCATGGCAAACAAATACGTGGACTGGCTTTCAGCAGTCGATCCAAAGGCTTACTTCTCTCTGCTTCCCTGGACAGCACAATTAAACTGACCAGCCTGGAAACAAATACCGTGGTCCAGACTTACAACGCTGGGCGGCCTGTCTGGAGCTGCTGCTGGTGTCTTGATGAAAACAATTACATCTATGCTGGACTGGTCAACGGTTCGATTCTGTTATATGACCTTCGAAATACAAGCTCTCACGTCCAGGAATTAGTACCTCAGAGAGCTAGATGCCCGCTGGTATCCCTGTCGTATGTGCCCAGAGCTGCCTCTGCTGCGTTTCCATATGGTGGCGTGTTGGCTGGAGCGTTGGAGAATGCCTCTTTTTGGGAGCTGAAAATGGGTTTTACTCATTGGCCTCATGTGCTGCCCATGGAGCCTGGGGGCTGCGTAGACTTTCAGGTAGAGAGCAGCACCCGCCACTGTCTCGTGACCTATAGGCCTGATAAAAATCACAACAACTTACGAAGTGTACTCATGGAGATGTCCTATAAACTGGATAATGCTGGAGAGCCCATCTGCTCCTGCCATCCTGTACAAACATTCTTTGGGGGACCCTCCTGCAAATTGCTAACCAAGAATGCCATTTTCCAAAATCCAGAGAATAATGGCAGCATCCTGGTGTGTATTGGGGATGAAGCATCAAAATCTGCCCTGCTGTGGGATGCTGGCAGTGGCTCATTGCTGCAGGATCTGCAGGCCGATCAGCCTGTCTTGGACATCTGCCCATTTGACGTGAATCATAACAGCTACTTGGCTACCTTAACAGAAAAGACCGTCCACGTCTATAGGTGGGAGTAACCATGGTCTTGAAACTTATCAGTCATGTTGCTGGTTAATGTTACATGTTGTTTGCTAGTACCTCACAGCCTTGAGCAAGATCTGTGCTTATTGTCTGTGGCCTAGAACTTGTGGGATCGTGGTTCCATTAGGTTAATAAGATCCTCAGATTCCAGGTTAACAAAACACTATAGATGGTGTATCTTCAGTGTCCATCAAAAGAGTAAGTGACTGGTACTCCATCAACATTATCCATTTCTTGGGTTAAAAGCTTTCATGAATCTTTGTTGAGAATCAATATGTTTGATCAGACTTGCTGCTGAGCCTTGGAGAGTATCCTCCCTGCAGTCACTTAGAATATGGATGTACACCGAGCATCTCCGGATGTGACATCCTGCCTGAGTTGTCCTGTCACTTGACTGCATGACTTGAGAGTGCTTATGTTCCTGATGGGACTAACCATTTTGATGCTCCTTGGATGCAGCGTGGATGCAGAAGTCTTCAATTGAGCACAAGAGGGCACTATACAGTCTTCTGAAGAATTTGACCTATTTCTGACCTTGTAGGCTGATAATCTTTTAGTAACTTGGTCTCATCCCCACAGAACTGTGTGGTAGAGCTCATCTGGTCTGCTCTGTGGCAGGAACAGCTTTGTTCAGGTGTGCAGTGCCAGGATAGTGGTAAACCCAGTGATGATGGCAGCTGATGAGCTGTAGATCCTTTCCTAATGCCAAGTGTATGGGGTTCATCACATTGTGCGAATCAAGGAAAGAGACCAGTTGTTTGAGCAGTGGGGAAGACTCACCTTTTTTCTAGGCAGCTAAGATCCCAGGATTGGTTTTATATAAGCCAGTGCTTTGAAAGCCACTCTTTGTCCTCTCACTAGGAAAAGATGAGCCATATGTCAAAGCTCTTACTAGTATGAAAGATCAGAAGCATGGTTAGAGAGATCTAACCAAGAGAGGCTTACAAAAGAGAAGCTGCTTAGACTGCTGTTGAAAGCAGAAGAGGACTTGTCTCTTGCATTTTTATAGAGTCTCTCTGAATAAAGTCAACCCCTTGGAGTAAGGAACCATTCTTGAGTGTGTTTAGAATTCCCTGGTTAAAGCCTGCCCCCAGGTGAAACTGTTGTTTGATTCCAAATTCCTCTGATGTGCCTCCTTTCCTAACTTTTTTTAAGTGTTTTTAGTAAAATAACAGTGGTTGGAGGCCTGTGTGGATTGCAGGGAGATGCCCACCAGCTTTCATTCCAGCCCTGGATTGTCCCACTTTTGGAGCTGTATTTTTCTCCAATAGAGGGTTCAGTTTATATCTGTTTGCTTTGCGAAAGGCTACTCTACTAAACTACTGTCCACAACAGAACATGTCTCAAGGCATGCTCCCTGTTCCTGGGGAGCAGGATGGCTAACTGAATTTCTTAATAATTGTTGTAGAAATGTTATCATTATTTTTATTTTAAAACAGTTCTGATCTGTCATCTCCTGAGCTGTTTCCAGCATTTCTCACCAGCAAGGGCTTATTGCAGTAGATTTCCCGAGTTCCATGTTCTAGTTGTGCTTTTTAAAGAATAGCCTCCTTCTGTTTAAGGAAACTGTTCAAAAAGCCAGTTTCCAGAACCTGGGAAAGAGCTCCCTTTTCTAGAAGAGGTGTAACCTTTTGGTATGTTGATGATTAAGAATAACTGCCCAGGCCTAGAGCTTCAGGGGCAGAAAAGGATTTGAATTAAAAAACAATCTGGTTTCAGCAGATGATAAGAGAGAGGATATAAGTGGTCAGGCCCTGGCTGCTTTAGTCTTTGGCTAGGGCAGAACCCCGGGCAGGGTTGAAGTACACTTAGCTGATGCTGACTGAGATCAACCCCCACCCCCAAGCGTAGGAACCAAGGGACTTGTATTATTAGAGAAGTTGAAAGAATCTCATGCCTTACCAGTCCTTGCATTCCCCTAGTAAGTTTAGATGTTAGAGAAACAAAAATTCTTGCGATTGTGACTGATTTCTCCAATGGAAGAACTTCCCCTCCACCCCTGCTCCCCTCGCCTGGGAGGAGAGATGACATCTGTAGATGCAGGCTCTACCCCACCATCTTCCCTCACCCCAGTCCCTGAGATTGTTTTCCCATTTGAGCGTTTGGAGTTAAGCAGACTCAAAAATATTTTCTTGTTATATATATCCTTGTACCTGCTTTGAAAACCAGACAGTGGGATCTCTATTCATGTCCTATGTTTTAATGTTTGTGTTTTATGTTTTAATGTAAAATATGAAAATAAACATTTACCATATGTTTCAGCTTCTGATGTCTTTTGTCTCTTTGAATGCTAGAGGCAGGAACCTGTGTGCCTTTTGGAAAAGGGGTCTAATCCCAGACTGCCTTGTAGATTTCTTCATTTCCGTAGTACTGGGTCAGAATTACACAGGATGGTCCCTGGATCAAAAGTAAACATCATATTTAAATTAATGAAGTAAGTTGAGGCAGTAGTTGGCAATTCTCTTTTACTGTTGCCTCTTAAGTCCCCAGCACTGGTCACTTGTCTGTTTCTGCTCAAGGGTCTAAATCCTGCAAACTACATTTGCTTGCTGGCTTCCTATTAGTCTCTGAGTCCAGAAGACTCTTCTGTGTGGGGAGGAGAGGACTTCCTCTTCTCTTTCTCCTAGTCTTTGGCAGTGCTCCTGGCAGTGACAGCAGCACTGGGCACGTGTGGACTCCTGGGTTTCTGCTCAGCACAGCTCTGGCCACTTGCCTCAGTTTCTTTGTTCTGTTCAGTTCAGGAATTTCTTTTGCTGTAAATCATGGTGTTCTGGGATTAGACTGGAAAGGCTGAAAATGTTTTCCAGCTGAACAGCAAATGGAGTATACTAGATTGTAGGAGGACTAAATCCATAAGTTTAATATTGTCATGGAGCCATGTGCTCCAATAAAAAAGAGGTTAAAAGGTCCTGAGTAAAGAAGTAAACCCCAAATTACTAAGAAACCTAACACCACTGTTTCTCTTCCATAGTATTCTTTCCTTGGTTTCCCATCTCAGTGGTTGACTGTAAGTGAAATTTCTAAAAATAAACATTTGTGTGTCCTTGTCCTTTAATCAGTTTGTTTGTTGGTAACAATCTCTTGTTTGTTTATCCCTTTGTAGTTTACACAGCCCCTTTCTAACACATTCATTTTTAAACAATGTTGTGGAGTAAATATTGTTACTCCAATTTATAGGAGAAGAAACAGGTTAAAAATCAAGTTCAAGAGAAAATAACTTGTAGGTGGCATTTGACTAAAATTTACATATCCTATACTTATTTTACATGTTCTATACTTAGCATTCACAATTAAAGCAGACAGTCATGTACTTGTGACATTTTACATTCTTCCAAATGCCCTCATCTGTCTTGGATTTCTGGGTGCCGAGGCTGGAATTACCACACAGGGTGATATCTGGGTATTTGACTGCTCTAATGGCCTCATCTAAGTGGAATCCTGCAGTATTTGTCTTTTTGTGACTGGCTTATTTCACTTAGCCTAATGTTTTCAGAGTTCATTCATGTTGTAGCATGTGTCAGATTTTCCTTTTTAAGACAATGGTACTCCATTGTATACATGTATACCACATTTTGCTTATCCGTTCATCTGTCAATGGACAGTTAGGGTGCTTCCACATTTTAGCTATTGTGAATAATGTTACTATGAACATGGGTGTACAAATACCTCTGAGACCCTGCTTTCAGTTCTTTGGGTATATACTCAGAAGATCATATGGTAATTCAGTTCTTAATTATTTGAGGAACTGCTATATTGTTTCTAGCAGCTGTACCATTTTACATTCC EMBV3_08628 CAGGTGGCCCCTCTCGATCTGGGAATGTTCGAGAAACCAACACCATTTGACCTTGTCTCA Gene GeneID:522736|LOC522736:XM_002685162:155_cdna Constitutive 0 NULL GeneID:522736 1 GENE LOC522736 NULL similar to aryl hydrocarbon receptor 2 EMBV3_22766 AAGGCCAAGGCTGCCGAAGCCAAAGCCACGCTCTGGAATGATGAGGTGGACAAGGCTGAG Variant GeneID:504750|SH3GLB2:NM_001076802:28_cdna 726^788 2 EMBV3_33073 GeneID:504750 11 GENE SH3GLB2 MGC142738 SH3-domain GRB2-like endophilin B2 EMBV3_13816 GCCATCGCTTGCTGGGCGTGTGGATTTTCCCTGGCCATAGTCCAAGTAAGTCTGTTTCTA Gene GeneID:514891|LOC514891:XM_002687028:99_cdna Constitutive 0 NULL GeneID:514891 4 GENE LOC514891 NULL similar to olfactory receptor OR7-15 EMBV3_28204 TCCGACTGATCCGGACGTGTCCTAGGTTGATTGAAATGGAATCTGAAGTCACTGTTCCCT Gene GeneID:533186|CLYBL:NM_001080296:23_cdna Constitutive 0 NULL GeneID:533186 12 GENE CLYBL NULL citrate lyase beta like EMBV3_05265 CCGGTTGCTGGCTACCTCCACTTCGAGCAGGTTCGTGAGCCGCATCTTCGTGGTGCCCAA Variant GeneID:508051|WDR4:NM_001100320:17_cdna 100^579 2 EMBV3_27438 GeneID:508051 1 GENE WDR4 NULL WD repeat domain 4 EMBV3_12797 AGGAGAGACTGGTTCTTTAGGCAGCCTGCTCCCAAGACAATGTCAGCCACTATTAGAGAG Gene BVT0101_013217 + 0 NULL GK000030.2:48844807-49230222 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042597 TCONS_00042591 TCONS_00042592 TCONS_00042581 TCONS_00042595 TCONS_00042588 1 XLOC_025700 Coding TCONS_00042595 XLOC_025700 Coding Coding MPP7 13:36769517-36835029 j TSS31665 4265 1 TCONS_00042595_2 346 0.0611957796014068 11 0.93506434033979 0.00291561591796466 0.000591558449812285 0.000493730058571749 0.00370999892232447 0.00424275243087907 0.00171829754214375 0.00366335197607009 0.00412083263612433 0.00912366388691869 0.000727481576259289 0.000343439251809466 0.000222741398024596 0.000557144583123579 0.00117720305080555 0.00147994752975467 0.000503620769397779 0.000541002880833039 0.0013030404523018 0.00283507064862159 6.62953236077812e-08 0.00207618206269706 0.00049794145013508 0.000771226693201827 0.000830152412580424 0.00293973718540441 0.00359471181495287 0.00272542278523716 0.000173623050653591 6.93007557675154e-05 0.000322024756216132 NM_001100347.1 MPP7 Bos taurus membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) (MPP7), mRNA. 0.0 4473 99.96 0.582180539273154 XM_005252367.1 MPP7 PREDICTED: Homo sapiens membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) (MPP7), transcript variant X1, mRNA. 0.0 2767 82.43 0.65158264947245 TCONS_00042595_2 sp|A6QQZ7|MPP7_BOVIN MPP7_BOVIN MAGUK p55 subfamily member 7; 0.0 725 100.00 0.997109826589595 3 coding 0 0 0 0 -0.0508818008426173 0.622212818013468 -0.0699698956089585 0.175977303081003 GCCTCTGAAACCTGAGAGGCATGAGGTCTTATTCATGTTGGCGATGAACTTAGGGAAGTGAATGGGATACCGGTCGAGGATAAAAGGCCTGAGGAAATAATCCAGATCTTGGCTCAGTCGCAGGGTGCAATAACGTTTAAGATTATACCCAGCATCAAAGAAGAGACACCATCGAAGGAAGGCAAGATGTTTATCAAAGCCCTCTTTGACTATGACCCTAATGAGGATAAAGCAATTCCATGTAAGGAAGCCGGGCTTTCTTTCAAAAAGGGAGATATTCTTCAGATTATGAGCCAAGATGATGCAACGTGGTGGCAAGCAAAGCATGAAGGAGATGCCAACCCCAGAGCAGGACTGATTCCCTCTAAGCATTTCCAGGAAAGGAGACTGGCTCTGAGACGACCAGAAATATTAGTCCAGCCCCTGAAAGTTTCCAGTAGGAAATCATCTGGTTTTAGGAGAAGTTTCCGTCTTAGTAGAAAAGATAAGAAAACAAATAAATCCATGTACGAGTGCAAGAGGAGTGACCAGTATGACACAGCCGACGTGCCCACATATGAGGAAGTAACACCGTATCGACGGCAGACGAACGAGAAATACAGACTTGTAGTCTTGGTTGGTCCTGTCGGAGTAGGTTTGAATGAACTGAAACGAAAGCTGCTGATCAGTGACACACAGCACTACGGCGTGACAGTGCCCCATACCACCAGACCAAGAAGAAGCCAGGAGAGTGATGGTGTTGAATATATTTTCATTTCCAAGCATTTGTTTGAGACAGATGTACAAAATAACAAGTTTATTGAATATGGTGAATATAAAAACAACTATTATGGCACAAGTATAGACTCAGTTCGGTCTGTCCTGGCTAAAAACAAAGTTTGTTTGTTGGATGTTCAGCCTCATACAGTGAAGCACTTAAGGACACTAGAATTTAAGCCGTTTGTGATATTTATAAAGCCTCCATCAATAGAGCGTTTGAGGGAGACAAGAAAAAATGCAAAGATTATCTCAAGCAGAGATGACCAAGGTGCTGCGAAGCCCTTTACAGAAGACGACTTTCAAGAAATGATTAAATCTGCCCAGATAATGGAGAGTCAGTATGGTCATCTTTTTGACAAAACTATAGTAAATGATGATCTTGCTGTGGCCTTCAATGAGCTGAAAACAACTTTTGACAAATTGGAGACAGATACTCATTGGGTTCCAGTGAGCTGGTTACATTCATAACTAAGGGAAGTTTTCATAATTATCTTTTTTTTGTAGAGTGCATGATTAAATCAGTTACCATTTTGGTGGTAGGGTTTTTTTAATCTATATCACTGTTAGAGATGTGCAATCTTGGTTAAAACTGAATGTTGGTTTTTTATCTTTTTATAGTCTTATTTCAAACACAGTGTTTGAGTATAAGATCCAGAATTTAAATGTGCACAGTACTGTATTCTGAGCAGAGCTTTGAACCATCTGGCTGTCTTGAATACAAAGCTCTACCTCCAAGAGGAGGGTTGAACTTTTTATAGAAAGTCTTAGCCAAAGTATATACATGGGCATCCAGTGCTTCTGCTGGTCTCAGACGCAGTCACTGCCTTTGCTATTTGCATGTCAGCCATTGAAGATGATAAGTTTACAGCCTTGAGCAGCTCCAGACAGGACAGCTTAGGTGTACTTTGGGTGGATCATCATAGATGCACCTGGACTGGCAGTAAGGCGGTCCTCTTACTATCCTAAAAGTGCAACATTTTCTCTTACATAGACAGTATAGTCACAGTGTGTGCACTCAAGAATCTCTCTTTAAAGGAATTACTGAAAATCTGTCCTAGCGAGTGGCCTTCATGTTATAGTTTGAGAAGGCTTTGTGAGTACATACACTAGTGACTCAATAAATGTTTAATAAGGGAGGGTAGGCTTTGAAAATTATTACATACGAAACTAAAAACCTTTCCTTGTTAGAACGGTGATTACATACCCAAAAGGACTGATTACAAAGGACAATTTTATTTATAAATTCTCAGACATTTCTTTCTGGACTCACCAGAAATTCTGGAGCCAGTTATCTGACTTTGCATTTTCCCAGTAGATTATAAGAATGAATCCTATTCTAAATGTAGGTTTTATATGTTACTGATACAGTTAAAGAAAATGTGATCATTTTCCCAAATATGTACAGTTGATCACCATATTTAAATTTCACTACAAATTGTACTTTAGAAAACTGTTCATGTAATGTTAACTTATTTCTGTCATCAAAATATTTCTTTACATTGGCCAGATACCATCCTAATCTTGCTGTTTTTAAAGAAGTTTAAGAAAGACTCTCATATTGTAAATAGCTAGATGGGATCTCTCATTTTTCTTTGATACTACTGACCTTCAGCGAGTAAATTATACAGCTCAAAATACTAGAAATGTGCATAGTTGTATAAGAGAATATGCGTCCCATTCTTGCATGCAGTAAGACACTGCCAATCAGAGAATCATCGTATCTGTGACTTTGAAACAGAAAAAAAAAAATATTTTTGTTGATTTCTAAAGAGAGTTTAGATGTCCTGTTTAAAGAAAAATAGTGTAGTGAAATTTTATATATTTATGAAATATTTGAAAGGCATATTTTTTTAATTATCAAATGAGGCTATTCATAAAACAAATTGTATGTAAAGATGTTGTTAATTTAAAATAGTTTTTTAAATCTGGGTCAACATTCCATGTAAATATTTTGACCTTTGTTTGTTCTCAGATCCACATGTGTGCTCTGTGCACATTTGATAGCATGACTTACTGGGTTTCCTTCATACATGTGAAATTTCATACCTGATACACACTCGCAGCTAAATAGTTAGATAACCAATGTTACCTGACAGCCTAATCCAAACAGCAAATTCTAAGTTAATTAAGTAAACAGCAACCAATTCAGTTTAAAAAGAGGTTTGGGGTTGCCAGGTCTAATACTGAAGCCATACCTCATGGTTGCGTGGCTGGTCTAAGAAAGTACAAGTCTTCCTTGGATGGTTTGGGTGATATTCTTTTTCAACACTGATCGAAATTTCCAATACATTGACTTTCTAGGAAATGAATTATAATTTAGGTAGTCCGAATTCTTTGTTCAGAAATAGCACATGGTTTGTTTTTGTTTTTTGCCTCAATTCTTTACTGTGGAGGTAGAGAGCGTGTGATAAAAATGGAGTCCCTTTTGGTGGTGGGGGTGGTGATGGAGGTGTTATAAAAATATATTTTCCAATTTCTCTTCCTTTTTACACTAGAGCTGAAAAGTATTTTTTAAAATAATGGAAAAGGGGCAATTCAGCAATTTGAAAAATTTTTCATCAGTAGTACACATATGTGGTCTTGGTGACATCTACATAGCCACCTTGATGCTTAGAAAGAGATTCTGTTCTCTTTAATTTAGTAAGGCTAGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTTGCTAAGAGTTGGACACGACTGAGCGACTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTTGCACAGAGTTGGACACGACTGAAGTGACTTAGTAGTAGCTCCGTGGGCTTGGGGATAAATGTTGCAAAGGGCCCTTGATCCTGTACTTGGTGCACCCCTGGCTCCCTCTTGAGGGAGGAGAGACTGGTTCTTTAGGCAGCCTGCTCCCAAGACAATGTCAGCCACTATTTGAGAGAACAGGAATATTTATTTTTTTAAGTCCAAATATTTAATATCCAAGATTAAGAAGATAAGTCTGTATTCCCATCAATAACAAACTGGAATCTGTTTGCTTTTTTTTTTTTTTAGGTGAAATTGAAATACCATTTTTTACCATTATTTTACTTACCAGTATAGACATTATTGATATCTTTAAGGCTGACCTTCCTGGTATCATGGTATCATGTAATGACTGAATGTATCTAAATTGTAATAATTTAAAATTGACAAGCATATAAAGCAAAAAACTATGTTGTTAAAAGTTTCCTGAAGAGACAGATTTTTATTATTTATTTTCTTTTTGACTAGTAAGAGTTTATAAATAAAAGGAATGGAAAACCTTTGAGTGTAATAAAATATCTTCAAATTATATGTATAGTTTCTTGAAGATTGCTCTTGCACTTGGTATCTACTTCACTGTTTCTGATGGTAGAAC EMBV3_05664 CTCAATACCAGTTAGCCTACTAAATACTTCACATTAGGTTCCATAGGCCTTTTCCTTCAG Gene BVT0101_009005 + 0 NULL GK000016.2:73769215-73866648 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068261 1 XLOC_041630 Coding TCONS_00068261 XLOC_041630 Coding Coding SLC30A1 16:73764386-73772877 = TSS51136 6922 1 TCONS_00068261_3 506 0.0496966194741404 2 0.1849234393404 0.000557515237643562 0.000292668541137752 0.00053477458160542 0.000450940846117858 0.000545452775065725 9.75730226751689e-05 0.00063316698143157 0.000653071259142993 0.000948930965213 0.000142223235178487 9.38198792362615e-05 5.79849044875039e-05 0.000134158456964506 0.000343193577634192 0.0004438565554533 0.00404907399275721 0.00253082208006661 0.00549966329132775 0.000458693428408065 0.000528590835992421 0.000216982919717683 0.00314048366538834 0.0024944205441319 0.00348301757086006 0.000498620995729925 0.000527563677235576 0.000401133133992251 0.000401739122644375 0.000186876690104736 0.000468179580110829 NM_001205893.1 zinc transporter Bos taurus solute carrier family 30 (zinc transporter), member 1 0.0 4816 100.00 0.385582201675816 NM_021194.2 zinc transporter Homo sapiens solute carrier family 30 (zinc transporter), member 1 0.0 2706 89.98 0.289078301069055 TCONS_00068261_3 sp|Q9Y6M5|ZNT1_HUMAN ZNT1_HUMAN Zinc transporter 1; 0.0 875 88.02 0.99802371541502 1 coding 0 0 0 0 0.00785571372202358 0.958052820784784 0.00785571372202358 0.958052820784784 CGTCTGCAAAGGCGGGGGGGCGGCGGGTGGCGAAGAAGGCGCCCGACACCGGGCCGAGTGCAGCAGCCGTGGCCGCCGCCTCTTTAGCTCTTCAGGCGTCGCCTCCTCGGTCCGGGCCACACCGGAGGAAGACCGCCGGAGGGGAAGACCTGCGCGGAGAACCCGCAGATGCTTGGAGCCTCCTCAGCGCTGAGCTGCCGGTCGCCCGCCCCCGCCGCCCGCCTGCTCGCTCCTGCTCCGGCTCTCTGTCGGCGGGCTTCGGGAGCCCCAGCTCCCTGCCGCCTCCGCCGCCGCCCCGCTGTGGGGGTGTGGGGGCTGCTGGGGCTGAGCCGGGCCTCGGCGCCGGCTCCGAGGACGGACGCCTAAGAAGGAGCTGCGCGCCGCCGGCCGGCCGGGGACGCCCGCAGGCGCGTGGGCTCGGCGGCTAGACCCCGGGCTCGCCCGCCCCTGTCCGGTCACCGAGGCCCCGCGGCAGACTCCCGAGCCCCGCGCCGCTCGCCCTCCCTCCCTCCGTCGCCGGCTCCTCGGCGCCTCGCCGCCGCCTCAGGAGTGTCCGGGCCGCGCTCGGGCGGGCTTCTCAGCCGCAGCCATGGGGTGCTGGGGTCGAAACCGGGGCCGGCTGCTCTGCATGCTGTTACTGACCTTCATGTTCATGGTCTTGGAGGTGGTGGTGAGCCGGGTGACCACGTCCCTGGCGATGCTCTCCGACTCCTTCCACATGCTGTCGGACGTGCTGGCGCTGGTGGTGGCGCTGGTGGCCGAGCGCTTCGCCCGGCGGACCCACGCCACCCAGAAGAACACCTTCGGTTGGATCCGGGCCGAGGTGATGGGGGCTCTGGTGAACGCCATCTTCCTGACCGGCCTCTGCTTCGCCATCCTGCTGGAGGCCATCGAGCGCTTCATCGAGCCGCACGAGATGCAGCAGCCACTGGTGGTCTTCGGGGTCGGCGTGGCGGGGCTGGTGGTCAACGTGCTGGGGCTCTGTCTCTTTCACCACCACAGCGGCTTCGGCGACGACTCCAGCCACAGCCACTCGCACGGGGGGCACAGCCACGGCCTCCCCAAGGGGGCCCGCAGCAAGAGCAGCCGCGCCGGGGGTAGCGACAACGCCGTGACCCCGGGCGAGCAGGGTCCCGACCAGGAGGAGACCAACATCCTGGTGGCCAACAGCAGCAACTCCAACGGGCTGAAATTGGACCAGACAGATCCAGAAAAGTCCAGAAATGATGCAATGGAAGTACAAGTGAATGGGAATCTTATCAGAGAACCTGAAGAGGTGGAATTGGAAGAGGATGAAGATAAGACTGGACAACTTAACATGCGTGGAGTTTTTCTGCATGTCTTTGGAGATGCTTTGGGTTCAGTGATTGTGGTAGTAAATGCCTTAGTCTTTTACTTTAATTGGAAAGGTTGTCCTGAAGGGGAGATTTGTGTGAACCCCTGTATACCTGACCCCTGCAAAGCATTTGTAGAATTAGTTAATAGTACTCAGGCAACAGTTCAAGAGGCTGGTCCTTGCTGGGTACTGTATTTAGATCCAACTCTTTGTGTTGTAATGGTTTGTATACTTCTTTACACAACTTATCCATTGCTTAAGGAGTCTGCTCTTATTCTTCTCCAAACTGTTCCTAAACAAATTGATATCAAAAATTTGATAAAAGAACTTCGAAATGTTGAAGGAGTTGAGGAAGTTCATGAATTACATGTTTGGCAACTTGCTGGAAGCAGAATCATTGCCACTGCTCACATAAAATGTGAAGACCCGGCATCATACATGCAGGTGGCTAAGATCATTAAAGACGTTTTCCATAATCACGGAATTCACGCTACCACCATTCAGCCTGAATTTGCTAGTGTAGGCTCTAAGTCAAGTGTAGTCCCGTGTGAACTTGCCTGCAGAACTCAGTGTGCTTTGAAGCAATGCTGTGGGACACGGCCACAAGCCCAGTCTGGAAAGGATGCAGAAAAGGCCCCGTCAGTTAGCATTTCCTGTTTAGAACTTAGTGACAATCTAGAGAAGCAGCCCAAGAGGACTAAAGTTGAAAACATCCCTGCTGTTGTGATAGAGATTAAAAAAATGCCAAACAAACAACCCGAATCATCTTTGTGAGTCTTGAAAAAGATGTGATGTTTGACTTTTGCTTTAAACTGCAAGAGGAAAAAAGACTCTATTGAAATTCTATGTTTGCCAAGTAGTGTAATTGAAGTCCTTGTCTGGTCACACAGTTTAATTCTATTTTTGTAAGAACATAATGGGACTGCTTAACAGAGTTCTATATTACAACTTTGTGACTATTAGTGCAGAGTACAGCTATGCTGTAACAGTTTTGGAAAGCCAGTTTTAACACTATGTTACATTTTTGTTTAAGTATAAACCTTATATAACATAATGCTATTTGATTTCCAGTTTTTCAATGGTAAAAAACTAATTAGGGGGATAAATAAATTTAAATTGTTACTGGAATTTCTCTGCTTTTCTTTTCCCCCAGTGTTATATTTTGTTTGTTAGAATTATAATTGCTAGAACTCTAAAAATCAACAGGTCTGTTTCCTTTGACGTTTTATGTAATATTTACTTGCCCTTTGAGATCATTACATAGCATAATGGCAGCATATTTTAAGAATGACTCATGAATATTATTAGGAAAAGTTCTTTTTTTTCTTCACATGGGGTTTTATGATACTGAAGATCAGTTACTACTCTGTATCCTATGTTGCTGAGTATTATTCTAATAAATAGATAATTAAATTGAACTAGTATACCTATAATAGGGCAAATGGACAGTAAGAGCAGGGAAGGAAGTTTTACCAAATTTAAGTATTTAGATTCTTGTAAGTTAATAATCAGACTACATATCTAAATTATTCTGAGAATTTTAACTTTTTTTTAAAAAAAAAAACAAAGGTAGTCTAAAAGATGAATATGTTCACCAGCATTACTTCCTTTGAAAGATTGGCATTAGAAACAGAGTTGAAAGTTTACTCATAAAATATACAATAAATATTTTTAAGACTGTTTAATAATTACATGTTAAATGAAAGCTTATTAATCTAATCTTTTAAATTGTGAGTTTTAAAAATAACTTCAGAGTCATTTCACAGTGACCAATTATGAATGGATTCAAACAGCTTTTTGAGCCCAACCAGCAATGCTTGTGCTTTGCCAAGAGCCATTGACTTGAGAGAAAAATCTGAAGGTTAATGCAGTTTGGATATTAAACTGTCAAAAAGCAAAATTTGTTAAGACAAAATTAATAATTGAGATTCTATATGTCATTCTGTCTTGACATTGCTCAGACCTTCCAATAGTGGCTTATTTTGCAAGATGTCGTAATATCTATACAGGAAACTGTTATTGGCTATTTCATTGTTTGTATGGATTTCAAATCCATACACAAATATTATTTAAGGGTATTTAAGTTATATTTTTCTGATAGAGGGATTATGCTTTGTGAAGAAACTAGATTTTTGTCCTCAAAAGGATGAATATTAATATCAGTTATCATGTATAGCTCTATTTTTCTAGAAACGAGGTATCCTGACTACTTTAGTACCTTTTATAGCTGACTACTTTGGGGATGGCTACCTTTTGGGATTTGAAATAATTCATTGTTTAGTGGGTCTTAAGATGAAAACGTTGGCATTTGACAGTTAACTTTTTAAAGGGATGATCTTTTATGGTAGACGATGTGATTTTTTCCTAGTATAAGCCTGTTGCTGGCAATGGGCCTGTTTAAGAACACCCGATTTTTCCATTGAGAATGAGGTAATTTTAGGAACACAGTTTGTAAGTTCATATTTACTATAATGGGCCAAAACCATAACCTGCCAATTTGCAATACATCTTTATCATTTAATACTCTTCTGATATTGTATATTTCAATTCCTAAACTGGTAGTTACTTGGAATTTTGCAAACATTTTTTTAAAACATGAAATTGGAATTTCATATGAGTGAACAAGAGAAAGCTTCAAATTATATCATGTACATTCCTGATTTACCATTTTTTGAAGATCTCAAAACAATTTATGTTATAGAAATATTTCAGTAGTGATATAAAAGGATAACTGGTAATATATATTACATTCAATGAGGTTTTCTTTACAATGCTCTATTGGGTCTATTAAAGGTTGCATAAGGCATACGACATCAACTGAAAGAATTTTTTTTTTAATGGTGTATAAGCATGGGACAAGGGCTACTTTTTTCAAAGTGCTTTGAAAGTAACAGCCTTTAGATTTTAGTTATTTCACTTCATAATTTTAAGTAGCTCATAAGTAACAAAGTGGTACCATAGGATTCTCTTTTTCAAAGGATTTCTGTCATAATAGCAAAATCAGTGGGCACTGACCCACCTTTTCAGTTTTAGCAGAGAATTATTTATTTCTTTACAATGCACTTTCTAACCCATTTTTAGCTATATTAGCATTATCTTTTTAAAATGCTTTTATATTTAAATATTGTGGGATTTAAGTGTCTTTTCCAAAATAGTTTATTCTTTCCTGGAAGAAAATGAGGGAAATTCCATTAATTATTAGGAGACTTAAACCCAATATTTAAATGCTGTTTTATAACACTGCATCAGTTTTAGGAGGTGCATCTCTCCTGCTGGCTCTTTTATATTTGAGCAAGATCAGTGTATTTAGAATATGTGTTTAGAAATGTGTCTATCGTCTCAATTTAGTAAGATGGAGGTGCTGCATGTGCCTGAATTAAAACCAACCCAGACATTTTTTCCAACCTAAATTCCGCCTTAGTGATGAGAGAGATTTAATTCTCCATTGTCACCTTTTAGTTATATGATTGTTTAATAAAATTTTTTTTTCCAGAGAGCATCTGCCCTGTATAAAGTATGAACTAAAACCTAAAGGAAAAGTAAAAAACTCAGAAACTTTGCTGTGTGTATTTTAACATTTTAGAAAGTAGTATGTTTGGGTAACTAAGGTATGTAATTTGACCAGGAAGAATTTGCATCAAGAGCACCTTGGAAAATCACAAGTAGATGACTATTAATGTTTGTACCTTGTTAACATCCTCAGTTAATTTTGAATTTTTGAAAGTTCTGAAGGAAAAGGCCTATGGAACCTAATGTGAAGTATTTAGTAGGCTAACTGGTATTGAGTTGTAGATTTTTACTGTTTATAAACAAATATCATTTGATGTAATGTCATTTACCTGCTGTCTTAGGATGTTCACACATACACAAATATGGAGAAGAATCCTACAATATAGAACTATTTATTTTAATAGAGTTTCAGTTAAGTCATAAAACAGTGTTAAAACTTGGGAAGGTGGAGGGTTTGTTGTTTTTTAAATTGAAACTGTCATACAGTGTTTGACCATCTGAAACGGGAATTATAATAGCACTATTTTGATGTAACTCTACCGCTATCATGTGGCAATGCTATTTAGTTTTACTAACAAGTTCTGAAATACTTAGCAGTCATTTTCACTGGCACAGGAGCCTTTTGTATGTCATTCAATTAAGACTTTTAAACCAAAAACTTTATGGTTCAGTGTCTTTGGCAAAAAGATACTGAAGGGAATGTAACATACGATTAATATGTGGTTATATATAAAAAGACACAAGTTGCCATGTTATGGTTCTGCCTTGAAACAGCACAATGAAGCGTATCAGTGTATCTGTGATTCTTTATGAAACCTCTGTGTTGTGTTGTTTTGTGTCTGCCACGGGGTGTCCTCTGGGCCAGGTGTGGCACAGTTAAATGCAATTATCATCTCATGAAATGCAGATGCAGATAAAACGTCTTTAGTGCTGCAACATTTTACCTAACTTTTTGTATGTTTCTGACTGTGCGTTGTTTTCCAAAGCTGTTCCTACCTCACCATGAGGCTTTATGGATTGTTATGTATTATAAATGTTCTTTATGAGACAGACTACTGTGTTTCTTCTCATTTATTAAGAGTTAAGTAGAAAAATAAACTAATTTTAATATCTACTTCATTGTTTTGTGCATATGGCCTCACTCAGCAGTTGTGGTGCACAGGCTTACTCGCTCTGGAAAATGGGGGATCTTCCCAGACCAGGGATTGAACCAGTATCATACTATCCACGATTTCAGGCAACCACTGGGGGACTTGCAATGTGTCCTTCATGGATAAGAGGAGACTAAAAGTGTGTGTGTGTGAGAGTCACTCAGTTATGTCAGACTCTGCGGCCCTGTGGACTGCAGCCCGCCAGGCTCCTCTGTCCCTGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTAGCATTTTCTCCAGGGGATCTTCTTGACCCAAGATCGAACCTGGGTCTCCCACCTTGCAGGCGGATTCTTTACCGTCTGAGCCCCCAGGGAAGCCCAAGAGGAGACTACTGGACTATGTTTTCTAGTAATTCTTTTCCAAACAATTAATTGTAAGATCCAGTGTTGAATTACAGCACCAGAGGAGACTACTACAATTGATTCCACATTTCTTTCATGCTTGAGAACGTTTCTGCGATCAGTGCATCAATACGATCAGTGGTATCTTAACCACTCCTTTTGGCCCACTGTGTCTCTTATTAGCATGTATCTTACAATTAATCATTCAGAAAAGAATTACCTGGTCTTTCCAGAAGTACTGCCAACATTTCCTAAAACCTTATGTACTATGCATTGCACATCTGGATGAGAGCTGTTGCTTTTGAATTAGATGAAAATATGCTTAAGAAAGTCAATGACAATGTTGCTTTTAAAGAAATCCCATAGACATTTCTGAGCCTTCAGAATTGACCGTTTTTGCCCTCCTCACTATAGCCTATATAGCCTTTTCTCTTTTAAATCAAGTAACGTAGCACTTTGTTGCATTTGCTTATTTACAAACCTATTTCCTTTTTAAAGATTATAAATTCTATGAGGTCAGAGCTATCTTCTTTATATCCTCGGAGTCTAGCACAC EMBV3_19643 CCCATAGCCAGTCTCTTCCAGACTCATAGCACCAGCAGTTCCAGAAACATTGAGCACTAT Variant GeneID:539496|MED21:NM_001038566:17_cdna 458^539 2 EMBV3_30910 GeneID:539496 5 GENE MED21 MGC133576 mediator complex subunit 21 EMBV3_41041 TGTAAGACCTGAGAGTGTGGTCAAGATGGTTTGCTGGCGTTCCCTGGCTGGAAAAGGTGA Gene BVV0102_225542 + 0 NULL GK000001.2:146840461-146844034 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002528 TCONS_00002527 TCONS_00002522 TCONS_00002526 TCONS_00002520 TCONS_00002523 TCONS_00002525 TCONS_00002524 1 XLOC_000631 Coding TCONS_00002528 XLOC_000631 Coding Coding TRAPPC10 1:146817594-146842735 j TSS1303 5082 1 TCONS_00002528_3 697 11 0.798289578361177 4.54413932161144e-17 5.67931777765984e-09 7.90420011390216e-06 2.23924136157456e-05 2.45701590717414e-20 1.0348723739866e-164 8.09848330242345e-05 4.93925436868776e-05 6.46120431951731e-89 7.66745096955865e-32 3.4377592327768e-05 3.86867953089671e-09 0 1.81004480687433e-35 9.00981933609395e-59 0.00273264057009215 0.00150394337218784 1.96659715527784e-72 3.08865210811939e-25 8.82051059399766e-10 3.71926523916762e-10 0.00175334307271365 0.00108196816790607 6.18376260707232e-05 4.48982240835627e-82 2.22093320414107e-47 4.92487686211973e-115 0.000171033954095225 0.000133591746824372 4.69242677892958e-06 XM_005202072.1 TRAPPC10 PREDICTED: Bos taurus trafficking protein particle complex 10 (TRAPPC10), transcript variant X1, mRNA. 0.0 9041 100.00 0.986225895316804 NM_003274.4 TRAPPC10 Homo sapiens trafficking protein particle complex 10 (TRAPPC10), 0.0 2946 78.00 0.740062967335695 TCONS_00002528_3 sp|P48553|TPC10_HUMAN TPC10_HUMAN Trafficking protein particle complex subunit 10; 0.0 1229 85.30 0.984218077474892 1 coding 0 0 0 0 -0.0810502899491472 0.592089560405736 0.01671755182592 0.714391882098087 GTGGTCTCCGAAACTCCTTGCCCACAGAAGGACAATGTTCTGGCTCGGGCTTCCAACTTGGCCCTCTTCAGGTCACAGGGTCGCCCTCCCCATGCACTCCTTCGCACAGCTGCGCGATCTCCGCTTCACCCCTGCCAACGCCGTGGTCCACGTGGGTGGCGTCCTGTCTGTGGAGATAACTGTGTGCAGTCAGATGCCTGTTCCCATCCACGTGGAGCAGATCGCCATCCACGTCCACTTCAGCATAGAGAAGAACAGTTACCGGAAGACCGCCGAGTGGCTCACCAAGCACAAGACAGCCAACGGGGTTGTTAACTTCCCGGCGGAGGCCTCACCCTTTCCCACATCCCAGAGCAGCCTCCCCGCGCTGGAGCTGTACGAGATGTTTGAGAGGAGTCCTTCCGACAACTCCTTGAACACCACAGGGATCATATGCAAGAACGTCCACATGCTCCTGCGGAGGCAGGAGAGCAGCACATCTCTGGAGGCGTCCTCGGGCCTGGCTCTGGAGGACGGGGCCCATGTGCTGAGGTGTGCCGGCGTGACCCTGCAGCCGGGGCCCAACACCATCGTGTTCAGGACGCAGGCCAGGGAGCCGGGAACGTACACGCTGCGGCAGTTGTGCGCCTCGCTGGGCCCAGTGTGGTTTGTGCTTCCTCACATCTACCCGCTGGTGCAGTACGACGTGTACTCGCAGGAGCCGCAGCTGCTTGTGGAACCACTGGCCGATAGCCTTTTGGCTGGTATTCCTCAGAAGGTCAAGTTCACTGTCACTACTGGCCATTATACAGTAAAAAATGGAGACAGCCTACAGCTCAGCAACGTAGACGCTATGCTTATCCTGTGTCCTGAGGAGAACAGAGCCGTGATCTACTCTAACACAAGAGAAAAGGTTTCTGACGCGCTGCTCCGGGTTCAGTCATCCGACAAGGTCACGAGCATCAGTCTGCCGGCTGCACCCACATACCACCTGATCGAATTTGAACTGGAAGTTCTCTCTTTACCTTCGGCTCCAGCAGCAGGAGGGGAGAGCACCCTGCTGGGGGTGACAGAGCCCCACGGGAAGCATAAGGACACGCAGAAGACTGGCCACTGCATGGCTACCACGGACCACAAAGTGTCCATCGATTGCCCATGGTCCATCTACTCCACCGTCATCGCGCTCACATTCAGCGTGCCCTTCAGGACCACGCACTCCCTACTGTCGTCCGGGACACGGAAATATGTTCAAGTGTGTGTCCAGAATTTGTCAGAACTTGACTTTCAACTGTCAGATAGTCGTCTTGTAGACACCCATGATAGTACCGACCTGCGACTAATACCGCTAAACACGGAATCTGAACAGTGCATCCACAGCAGGCAGGCCGTGTTCTTTGTCTGGGAGCTGAAGTGGACACAGGAGCCTCCCCCCTCTCTGCACTGCCGCTTCTCCACTGGATTCTCCCCAGCTTCCGAAGAACAGCTGTCTGTCTCCTTAAAGCCCTACACCTATGAATTTCAAGTGGAAAATTTTTTTACCTTGTACAACGTGAGAGCGGAGATATCGCCCCCTCCGGGCACGGAGCACTGTAGGACGGGCTCACTGTGCTCCCTGGACGTGTCCATCACGCGGCTCTCGGACCTCCTGGAGGTGGATAAGGATGAAGCCCTGACGGAATCCGACGAGTATTTTTCAACAAAGCTGATGTATGAAGTTGTGGACAACAGCAGCAACTGGGCAGTGTGCGGGAAGAGCTCCGGAGTCATCTCCATGCCCGTGACGGCCCAGGCCACGCACCGAGTCCACATGGAGGTGATGCCGCTCTTTGCAGGCTACCTGCCGCTCCCCGACGTCAGGCTATTCAAGTACCTCCCCCACCACTCTGCACAGTCTTCACAGCTGGACGCGGATAGCTGGATAGAAAATGACAGCCTGTCGGTGGACAAGCACGTGGATGACCAGCTGGACAGCGGCAGCGTCAAGAGCAGGGGCAGTGTGCACTCAGCTGCCAGCAGCGAGCACAAAGGCCTGCCGATGCCCCGGCTCCGAGCACTGCCCCCCGGCCAGGCCTTCAACTCGAGTGCGGGCACGCAGGTCCTGGTCATCCCCAGCAAAGACGACCACGTCCTCGAGGTCAGCGTCACATGACGCACAGGGCTCACACAGTCCCCGGGCCAGGCGTGTGTGCGCCGGAAGGATCCTGACTCAATGGCAGCCTCCTCGCTCTAGCCTGCCTTGTGTGACTCTGCCTGGCCGTGGGAGTGTCAGAGAAGTCCCCGTGCTCAGCTGGTTGTTCATGTCACCCGGGGTGTCAGAGGCCGTTAACTTCCTCCCCCTGCCCCCTGATATCCTCCAGGTTTGCCCAGAGCCCCGCCGCCTCCCTCCTCCTCCCTGCTCCCTGGAGAGCTTTCTGGAGCCCACTCGTCTGAGCAGTCTGTCATCTACCAGTCTTCACCTGAAGCCCAGATGTCTTTCAGGTGGACACACAGAGGCCCTGTGGGCTTGTTAGTGGCGCGTATGCCTTTCTGCCACATGGCTGCCCAGTTTCTGGGCCAGGTGGGCTTGTGTGTCTCCTCAGGAGGAAAGCACAGCCCTTTACCCCAGGTCATCTAGTCGCGCTTTTCTAGAATAACTCCCTCTCTGGGCAGAGGGATGGGGGTGAGGAGGGAATAAAAACCCCTTCTGTGCCTTGGGACGTCAGACTGGGAGGGCCTGGAGCATCTGACAGCTGGAGCCATTTTAAAGGTACTTAAAGACTAGGCCAGGGCATGAGAAACCACTCGGCACTGAGATGATTTAGGCATAAATGTTTCTGGAGCCCTTCCTCTCCTCTCCCCCCATGTGGATTAGGTATCATAGGCACTTGGAATTAAATATATATTTATTTTAATTATCATTTTATATGTGGGGGTTAATATGTTGTGTTTTTCTCTCTCTTTTTGAGTCTTTACATGTAATTGTTTCTGTATAATCAGTATTTTTTTTTTGCACCTTAAGTCTCAGAAATTAAGAGGTTCCATTTAAATGACGATTAGAGGGGTCTTCTCAGCATATTTCTAGTCTGGTTGTATGAGGGCAAGAGTCTTGGACTATTACTGTCCTGCCTGCTACATGGCAGTCATACCATACAAATGGGTTAATTTGCTTTAGGTTGTACATTTAATTGTACATATGGTTGATTTATTATTTTTAAAAGTACATACTAACTGATGTTTATGTATAAGTTGCACCAAAAATCAAGGACAAAATAAATGTGTGTTTGTTTTTATTGGTGTGAAAGTCACAGCTTGTAAATAAGTGTTGTATGTATTAAACCTTTTCCAGCTCTCCAAAGCGATGTATTTTTGTACATATGAAATAGAGAACTCTTAATTCATTAGGAAAGTGTGCTTGGAATTGAACCTGACCAGATTAATGCAAGTGAGTGTAGTCGGTCCAGCAGAGGGTGGGCCCTCACGAATAACCTCAGATGTGTGAGCCTTAGAGAAAAAGGAGGCTTCTGCAGCCACCACTGCCCCTGGCTGTCACCTCCTGGTGGCCTGAGGGCAAGAAGGCACAGGGCAAAATGAACAGAGAGCAGAGCATCACAGTCTCTTCAGTATATGGTCTTCCGGCTTATTTAACAAATAAAGGTGGTGATCCTTGCTCCCCTGGTTTTCATTATAGAAATTGGAGAAATGTACAAAGAAGATAAATACTGGTACATTTAATTAAATTTTTCAGAAATTTACCTTCCTTGTGTGCAGTTTAAAGCTAATAAACTAAGCAAATTAGAAGTTCAGAATCTAATGGTAGTTAACAGTTTCTAACACGAGTTTGCTTTATTGTAAAAATTGGTGATTGCCCTGCAGATCCGCCAGTGTCAGAAAAGCCTCTCACCCATCTGCATGGTGAGCCTCAAGAGTCCAGGGCGGCACCCTCCTCCATGTGTGACCTTCCAGAGGGGGATGTGGGTCTGTGCTTCCCGATACCCAGTTGACTTTTGCCCTGGGTTCTGATTCCACTATGAAATTCTCTTAATTACATACATATTCAGAAGGGAAAAAATGAAGTGGAAGTACAAAATGTTTATGGTGGTTTCTTATGTCTGAAAATTGAATGACATGAAATTTATCACAGGTTTATTTTTTCCTTGTTGATTACCCAAGAAGATCTTTTGCAATCTAAGTTACATGGGTACCTCTGTTGTTGTTGTTTTTAACATAAATGAAGAATGTCACCTAAAACTTTTTTTTTTAGTCTAAACGGCTGTAACTGAATTTTTGTTGTGTTTAAAATAAGGCTTATGTGTTTGAGACAAGCTGGTTTTGTAGGTAAAAATGAAGCAGCTGTTAAACAACTGTAAAGCCGGAAATGTGCATCCTAAGAAGCGGTATGCAGCCATTTTACAAATATCTGTGGAAGATGTAAATACTAGCCAATGGAAAAGGAAATAAGTTATAATTTTGGTGAATTTCATAGGGTCTCCTATGACTGGAAAAATTATAACTCTTAATGTGGGAATTCTTGTATTTAATCTGAAAATGACTTCTACCTGCAACTCCATCATCAGCTCAGCCTCTCATGGGCCAGGTTCCCATCCTGGTCTTAGGTGATGGGGCTGGGTATCCCAGAGTTGGCGGAGAAAAGACACACAGGCTTCTGGTCAATTCTAGTAGTGTTTAAAATAAAACTGAGTTACAAAATGAAGTTAAAACACTCCAGGTGTGTATATGAAATGAAAACTTGTACTACTTTTTATAAAACAACAAACTAACCTGATCTAAATGTTTTATTGTCAATTGTAATCTTTAAAAGAAATCCTATGTGATTTTAAAATTTGACTTTTCATGAAAATGCCCCTTTCTCTAAATGTATTCACCCTGTGCACCAGGCTGTAAGACCTGAGAGTGTGGTCAAGATGGTTTGCTGGCGTTCCGTGGCTGGAAAAGGTGACAAGTTGGTGACTTTGATACTGCAGGTATTAACTCCATTTTCATAGATTACTATGAAAGTCATTTTTCACATTATTCTGTAATATATTGTTAGACTAAAGCCATTGTATTAAGACTGTTTAAAATGTAAGCATTATAATTCTGAAAATACACATTTTAAGAAGAAAC EMBV3_40905 TCCTTCCATTCCTTTGATGACCAAAGAGGTACAGTGGAAGTCATCCATCTTATTCCTAGG Gene GeneID:531250|IKZF5:NM_001083713:42_cdna UTR3_Alt 1 NULL GeneID:531250 26 GENE IKZF5 MGC151779 IKAROS family zinc finger 5 (Pegasus) EMBV3_16275 CACAGGATCCACTCGGGAGAGAAACCCTATGAATGTAGCAAGTGCGGGAAAGTCTTCTCT Gene GeneID:789791|RBAK:XM_002698223:815_cdna Constitutive 0 NULL GeneID:789791 25 GENE RBAK NULL RB-associated KRAB zinc finger EMBV3_28870 CAGGCCTAGTGATCTCTGTTCTTCTCTCTAGGGTACTCCTTTCCCCAGGACCGTGCAATA Gene BVV0102_090665 + 0 NULL GK000002.2:126732883-126799590 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112369 1 XLOC_068265 NonCoding TCONS_00112369 XLOC_068265 NonCoding NonCoding - 2:126737799-126738235 - TSS83990 436 1 TCONS_00112369_1 45 1 0 0.00355745061592903 0.0045632843268252 0.00184655561811125 0.000457108788862537 0.000634133402720041 0.000787611541481856 0.00046814173709642 0.001967053170619 0.00450607031395795 0.000594525743162941 0.000147012062645619 0.000131217674699737 8.55521444218676e-05 0.000302091125420451 0 0.000848076660477225 0 0 0.00521372576774315 0.00382662826895651 0.00275722596934104 0.000187218826618686 6.31242622183377e-05 0.000269156836028596 0.00977296420102535 0.00787766517676298 0.00364181229068255 0.00118963377329259 0.000890753758825606 0.000661899229277453 NM_003047.4 SLC9A1 Homo sapiens solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 (SLC9A1), transcript variant 1, 2e-63 246 81.85 0.571100917431193 0 noncoding AGCCCTCAACTCTATCAAAAACTCACACGGATTTATTAGAATATGAAAAAGATTCGGTTTCTTCTGTACAGGCGGCAGAGCGGCAGCAGCTGTGGTGGCTTTGAACATGGTTGTCAACGTCACCCTTGCATGGTGACTCCTGCCCAAAACAGCACTTTCATGGAGAGGAGGGGGAGGTGAGCACCCTCTGCCCAGGCCACTGGGGAGGGGATGCTCTGACTATTGCACGATCCTGGGGAAAGGAGTACCCTAGAGAGAAGAACAGAGATCACTAGGCCTGGGCCAGGCCCATGGTGGCCATGGGAGTAGGCATGTATTTCTGAGAGCAAAGGCCTCTGGGGCCAGGGCTCCGCTCACCCACCAGACCTGGCCAGTGGGAGATGCTCAGGGGACACCCCCGCCCCCCGAGGACAGGGCTCTACAGCAGTGCTTACNN TCONS_00103816 TCONS_00103818 . 3' 10161 TCONS_00103816 TCONS_00103818 . 3' 10596 EMBV3_18602 GGAAAGACCCGGTGAAAGAGTAAGAGGCAGGGACACACTCAAGACACCAACACCTACTTT Variant GeneID:506682|FLAD1:XM_002685988:326_cdna 69^293 1 EMBV3_19330 GeneID:506682 3 GENE FLAD1 MGC127575 FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) EMBV3_32543 AAGCCAGGCGTCATTCAGATCTTGGGAGTTAAAACATCCAGGTTTCTCTGCCAGGGGCCA Gene GeneID:785576|FGF21:XM_002695200:895_cdna Constitutive 0 NULL GeneID:785576 18 GENE FGF21 NULL fibroblast growth factor 21 EMBV3_33713 CACGCGTCCATCCAGATGAACGTGGCCGAGGGCGAGTCAGATGACTCCATTCTCCGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41259 ACTGAGGATCAAGCCATGGAAGATATTAAGGAACAGCTTCTCAGACTGAAAAAATACAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07300 GGCATGGGCATGTCTTTACCTATTTACAGTTCAAGTGAATTTCCAAGACAGTGGAATTTG Gene GeneID:786015|LOC786015:XM_002699946:29_cdna Constitutive 0 NULL GeneID:786015 X GENE LOC786015 NULL similar to HIG1 domain family, member 1A EMBV3_35552 AAACAGTTGTCATTTCTGTCTTGGCCGGTCTTACACGGGGTTGGGAAGGTCCAAGCCGTA Gene GeneID:404122|ACTG1:NM_001033618:42_cdna Constitutive 0 NULL GeneID:404122 19 GENE ACTG1 NULL actin, gamma 1 EMBV3_23731 GTGGCTGGGGCTCCTGCTGCTCCTGGTGGCGGTGACCCTGAGGGACTCTCTGAAGAAGGA Variant GeneID:100298356|LOC100298356:XM_002688576:275_cdna 153^335 3 EMBV3_09062 GeneID:100298356 7 GENE LOC100298356 NULL similar to bone marrow stromal cell antigen 2 EMBV3_17808 GTGTCTGTGCAAGGACTTGTGAGTTTGGACTAATAAACCAGTGTGGCTGCCACGACAACG Gene GeneID:506601|RCAN3:NM_001045945:84_cdna UTR3_Alt 2 NULL GeneID:506601 2 GENE RCAN3 DSCR1L2 MGC137632 RCAN family member 3 EMBV3_12450 CTACTTGGATGGCATAAACTACAACTGTGTGGCTCCTGGCAAACGCTTCCGACCCATGGA Gene GeneID:282370|SMC1A:NM_174614:11_cdna Constitutive 0 NULL GeneID:282370 X GENE SMC1A SMC1L1 structural maintenance of chromosomes 1A EMBV3_42190 TCCTTGAGGGGACTGAGGTGCGGAGACGCACAGATCATTGATCCTCCGCTTCCCACGTCT Gene GeneID:100313434|MIR2422:NR_030879:132_cdna Constitutive 0 NULL GeneID:100313434 4 GENE MIR2422 bta-mir-2422 microRNA mir-2422 EMBV3_24424 TCTGCCACAGCAGAGTTTTATTGCCTGTGTCGTGAGCTGTGGTTTCACTAACACCATCCC Gene BVT0101_038982 + 0 NULL GK000030.2:13148298-13358796 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246293 1 XLOC_150951 Coding TCONS_00246293 XLOC_150951 NonCoding Coding - X:13329188-13345423 - TSS184683 2052 1 TCONS_00246293_2 119 0.156432748538012 3 0.873783417518788 1.98913634094895e-05 0.000176288218646019 2.33823405042203e-05 0.00010926520608367 9.71007252489416e-06 1.74320290947824e-06 2.55777233579333e-05 8.07076786526559e-05 4.22961194122858e-05 4.01022672303539e-07 0 0 0 0 0.000131501263345597 0 0 0 0.00040886924879416 0.000417046465291183 2.81086195417129e-05 0 0 0 6.93061169640278e-05 0.000328667713456162 0.000194163017617978 0 0 0 XM_005219908.1 CUEDC1 PREDICTED: Bos taurus CUE domain containing 1 (CUEDC1), transcript 2e-26 125 91.95 0.0419103313840156 0 noncoding 0 0 0 0 -0.0895504994106528 0.774599551020963 0.0246876721113242 0.704026099857127 AGGCATTCCAGTAATTCTGACCACCTCACCATGAAAAGGTGGCTATCGTAAGGACACAAGCCATCAGGAATCCAGGCACCTATCCACTCCCAAGAGATCTCTTTAGATGAGCAAAAAAATACCACAAAAAAGGAAGAAGTTATATATCATGTGGCACCAGGGAGTCATCAGATAGACCCAGAAAAAATATCGTTGGAAGCACAAGGAAAATGGCAGTAAGCAGGCCTGCTTTTTCATTGGAAAAGTCCCTGATGCTGAGAAAAATTGAGGGCAGAAGGAGAAGAGGGCGTCAGAGGATGAGATGGCTGGATGGCATCACCGATGAACCCGGGCAAACTTTGGGAAATGCTCCCATACTCATGGATCCCACCTGGATACAGACACTACTGTTCCTACTACCTGGCCTGTGGAAGGAGAAGGTGGGACGGCCCTTCCTGACTCCACCACCTGAGTGCATGAAGCATCCTTTGCTCTGCTCTTATCTGCCACAGCAGAGTTTTATTGCCTGTGTCGTGAGCTGTGGTTTCACTAACACCATCCCACCTGCTTCATGTCTTTCAAGGACATGAATTTGATTCCTCTATATTTCAATGGTATTGGTGTTGGATTGAGAGATTGCTGCAAATATTAGGTCTTACATCTTGAAATCATGGATCCTGTACCTTTATTACCAGATGATCCAGTTTTAATTTCCCACCATGATCATTTGTTTCTGGTTGTTTGAGGTCTTCTGGATGGAAGAAACTAGGTATTTGTGTCAACCTAGCAGCTGGGCTTGAGGAGTTAGAAGAACTCCATGAAAGAGAATGGAAGGTGACATTTGGGGAGGATAAGAGCATGGCACCTAAGATATGTGGCAAAGAAAATAAAGAGATCTTACTTCTATAGGCACTGGAATCAGTGATCTGGGTTCGAACACTGGTCACCACTTTCTAGCTTTGTGACCTTGGACTGGTTATGTATCGCCTCTGGACTTCAGTTTCCTCATCTGTAAATGGAGATAGTTCATGGGGTTGCAAAGCGTCTTGAGAGCATGGAAAACTGGCCTGGGACTTAGAATGGATTCTGGGACTTAACAAGGAAAAGACCTCTGTGTACTCTGACAATGACAAATAATAAGCTCATAGGCTAATCTTTTTGATTGGGGGTAGGGGCTGCAGTTGGTTTTTGTTTAGTCGTGGTCCTCCAAGAATAATAAAATCAGGCTAGCTTTGCCTGAGGGCTCTACATCAATATATTCTGCTTAATATATACTTCCTGGCAGCCATATCATTACTAAGCATGAGGAACTGTATTAGTCACTTTCGGGACAAGTGACCAGTCAGGAACAACTGCCTCACTCTGGTATATGGATTCTTTTAATTAAAAATCCAGAAGAGTTTGCATAGGAAGGGAGGCCAAGAGTGAACATGTTTGCATTCTTTTTAAGAGTTGACTTGTAATGTTGTGCGGCCGTTGGTGGGGGGGCACTAAGCTTCAAGCTCAGAGTCGATGTGTTTGGGATTTATCTGCATGGTATAAAGCCTACAGTGCCAGCAATGATTGGTTTTCTTTTGGCTCTGTGTGATTCCAATCGATAATTACACCTATTGATCAAAGGCATACATTCAAAACATTAATTTACATTGAGCACCTTAGCTTCATAAAATGGCAACAACTGAATTGGCTGAAATTGATTTCCCTTTTGTTTTCAAAAGAAAAATTCTCAGTGCTGTGGATATCCTCAGTGTGGATTCAGAGCTCAAGGTGGTTAATTATCCACCAATATCACAGGGAAGAAATTTATGCAAATGTTATTAGGGTGCAAATTGGAATCCCAGTGGAGGTTATTCACATGTCCTTTCGAAAGTTTATCTGCTGAGGTGGGGACCTCTCTCTGGACTTGGAGGGAGTTGGGCATGAGGAACGGCTGTCATTTGGAGCCACTGACTTTTTCATTCTCTACATTCTATTGGAACCATATTTCATTGACTCCAAGATACCACTGGTGGAAAAAACACGCCATTATCTACTGAATCACTAAGAAAAATAAAACACCACTAAATATACGAC TCONS_00246294 TCONS_00246295 TCONS_00246296 s 3' 27649 TCONS_00246294 TCONS_00246295 TCONS_00246296 s 3' 13118 EMBV3_23454 TATAAGGATATCATGCAGCTCATCGGCTTCGCCAACCTGCCCCGGGTGGATGAGTACTGT Gene GeneID:100299041|SEMA3G:XM_002697022:443_cdna Constitutive 0 NULL GeneID:100299041 22 GENE SEMA3G NULL sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G EMBV3_18481 TCCTTCAGAAGACAGGCAACCAGCAGAATAAAGGTTGCTCTCCAGCCCTGTGGCCGGAAA Gene GeneID:767847|PMPCA:NM_001076964:223_cdna UTR3_Alt 3 NULL GeneID:767847 11 GENE PMPCA MGC139568 peptidase (mitochondrial processing) alpha EMBV3_16386 GCCCTCTGGAAGCTGTTTCCTCAAAGTCTCATCCAGCTCAGAACCACAGAGATTGGGTTA Gene GeneID:613448|AK5:NM_001083757:89_cdna Constitutive 2 NULL GeneID:613448 3 GENE AK5 MGC139240 adenylate kinase 5 EMBV3_01696 GTTGGCCTCCGAGGAGAGAGTGAAAACTGAGCCGCTCTGCTGCTGTCGCTGTTTTGGATG Variant GeneID:508956|CUTA:NM_001075379:92_cdna 56^214 1 EMBV3_18886 GeneID:508956 23 GENE CUTA MGC140443 cutA divalent cation tolerance homolog (E. coli) EMBV3_31117 TGACCAGTACAAGCTCACAGAGGACACGCGGCAGCAGGATGCCTAGCAGCCAGGCCACTG Variant GeneID:509920|LSM7:NM_001143862:48_cdna 236^325 1 EMBV3_36370 GeneID:509920 7 GENE LSM7 NULL LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_05329 AGGTGTTGGGAGGCGGCTAGAGGATCAGGCGCATCTCACCTGGAGGTAGAGACTGCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22069 GTGTTTGGCAGAGGCACCTTGTTGAGCTGTGGGTGTTTTACCGGTTATAAGTTGAAGGGG Gene BVT0102_104339 + 1 EMBV3_22356 GK000023.2:29123281-29143550 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11592 GTCTGTGCAGATACCCACCTCCTTCACGCATACTCTTGGGAGGCAGTTTTTAAGGAGATT Gene BVV0102_247482 + 0 NULL GK000022.2:51785997-51821390 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127287 TCONS_00127288 TCONS_00127289 1 XLOC_077615 Coding TCONS_00127289 XLOC_077615 Coding Coding CELSR3 22:51792948-51820403 = TSS95237 11978 1 TCONS_00127289_22 3314 35 0.564981423471989 3.56298801332324e-05 3.33880057807312e-05 3.74449787526172e-05 1.2275324377889e-05 1.1918593665043e-05 1.34668267690294e-05 8.11127341025995e-06 9.83503387801365e-05 4.47568798620598e-05 1.6945858190495e-05 6.1802880665554e-05 6.41780569801428e-05 1.60443791660334e-05 4.54419170420739e-05 5.21020916381465e-06 2.8522096728962e-07 2.28346602919005e-06 0.000205310903428975 1.18563277643435e-05 0.000186827760824671 5.28476329807772e-06 0.000130761752734045 0.000106561095633534 6.06325108311228e-05 4.87488052175756e-05 2.77659586651308e-05 3.27623812143199e-05 4.5536947487167e-05 2.20048639632913e-05 5.12262936155852e-05 NM_001205337.1 CELSR3 Bos taurus cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila) (CELSR3), mRNA. 0.0 2.159e+04 99.98 0.999916513608282 NM_001407.2 CELSR3 Homo sapiens cadherin, EGF LAG seven-pass G-type receptor 3 (CELSR3), mRNA. 0.0 1.473e+04 87.29 0.999916513608282 TCONS_00127289_22 sp|Q9NYQ7|CELR3_HUMAN CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3; 0.0 5912 92.94 0.999698249849125 0 coding 0 0 0 0 -0.0496379387082271 0.635084521765463 0.0515925171346876 0.339799898351405 GAACCATCGCAGCGGCCGGGAGCCATGTTGGAGCGGCGGGAGGCGGCAGCAGCGTCAGGGATGCTGTGGTGGGGGCGGCAAAAGCCGGGGCCGCTCGCCAAAGGGCCTCTGGCCGCGAAGTAGATGGTGCCCAGAGGGTGGCAACGGCGTGGAGCGACAGGCCTAGAGGCAGGGGACTGGGGTGGCGGCAGGGGTCCGGGTGGGGGTCCGAGCAGCGAGGCGGGCCCAAGGCCTGGACCGGGGTGGAGGACAGTGGAGGCAGTGTGGGGAAGTGGGGGGTGATGGCGAGGCGGCAGCCGTGGTGGGATCTCAGGGGGCCAACGACCCCGCTACTCCTGCTCCTTTCCCTCCTCTCTTTGTTCCCTCTTAGCCGGGAGGAGCTGGGGGACGGTGGGGGCCACGGCTGGGATCCGGGGGTAGCTGCTGCTACGGGACCAGGGGCGCGGATCGGCAACGGAGCCTTAGCTCTTTGTCCCGAGCCTCCCGGGGTCCGAGAGGACGGAGAGCCTGGCCTGGGAGTCAGGGAACCTGTCTTCGTGGGGCTCCGAGGGGGAAGGCAAAGCGCCCAAAGCGGTCGAGGGCCCCCGGAGCAGCCGGGGCTGGGAGCGGAATATGGGGTCAAGACATTTGGCAGCCGCGGGCGGGAGACCGGACAAGGACCAGGGTCTCTGTTATGCTGGCGCCCAGAGGTCTCCTCTTGCAGGCGGATAGGGCCTTTGCGAAGAGATAGTCTGTCACCAGAGGGTTTGTCCCCAGGGGTCCCAGGCCCGGAGAACAACCCTCCCTTCCCTTCGGACCTTCTGATTCGGCCCCGTGGTTCTCAGCCGGTGTCCTCTCGGAGGAATACTGGGAGAGGCTCCTCCCCAAAAGTGGGAACCACGCGCTGCTGCGGGGAACTGTGGGGACCAGGGCGCAGGGGTCAAAGCGAGAGAACAGCGACATCCCGAGCGAGGAGGACAGGCCCCCGGTCGGACCGCCCTCCCGGGGCCGTGGGATCTGGCCCCGGACTGGATTCAGCACCTCGCACAGCGAGGACAGCTCCCGAGTCTGGTTCAGCACCGCGCGAGTCTCGGACAGCTCCCGAGCCTACGCCCGAGCGCATGCGCTCCCGAGGTCTCTTCCGCCGCCGCTTCCTCCCGCAGCGCCCCGGGCCGCGCCCCCCTGGGGCCCCGGCCCGGCCTGGAGCCTGGAGAATACCCCTAGAGGGCCGGGCCCGCCCCCGTCGCGCCGCGAACCGCCACCCACAGTTTCCGCAGTACAACTACCAGGCACTAGTGCCGGAGAATGAGGCGGCGGGTACCGCGGTGCTACGCGTAGTGGCGCAGGACCCGGACACCGGAGAGGCTGGGCGCCTAGTCTACTCGCTGGCTGCGCTCATGAACAGCCGCTCTCTAGAGCTGTTCAGCATAGATCCGCAGAGCGGCCTTATCCGCACAGAGGCTGCTCTGGACCGCGAGAGCATGGATCGCCACTACCTGCGCGTGACGGCGCAGGATCATGGCTCACCGCGCCTCTCTGCCACCACCATGGTGGCCGTTACAGTCGCCGACCGCAATGACCACGCGCCGGTATTTGAGCAGGCGCAATACCGGGAGACGCTTCGCGAGAACGTGGAAGAGGGCTACCCCATCCTGCAGCTGCGTGCCACAGATGGTGACGCGCCCCCCAACGCCAACCTGCGTTACCGCTTTGTGGGGCCTCCAGCTGCGCGCGCCGCCGCCGCTGATGCCTTCGAAATTGATCCGCGCTCGGGCCTCATCAGCACCAGCGGTCGTGTGGACCGCGAGCACATGGAAAGTTACGAGCTGGTGGTGGAGGCCAGCGACCAGGGCCAAGAGCCCGGGCCGCGCTCTGCCACCGTGCGTGTGCACATAACCGTGCTGGACGAGAATGACAACGCGCCCCAGTTTAGCGAGAAACGCTATGTGGCACAGGTGCGCGAGGATGTGCGCCCCCATACGGTGGTGCTACGCGTCACAGCCACGGACCGGGATAAGGATGCCAATGGACTAGTGCACTACAACATCATCAGTGGTAACAGCCGCGGCCACTTTGCCATTGACAGCCTCACAGGCGAGATCCAGGTGGTGGCCCCTCTGGATTTTGAAGCAGAGCGAGAGTATGCCTTGCGCATCCGGGCTCAGGATGCAGGCCGCCCCCCGCTGTCCAACAACACTGGCCTGGCCAGCATCCAGGTGGTGGACATCAATGACCATACTCCTATCTTTGTCAGTACACCCTTCCAGGTCTCTGTCCTGGAAAATGCACCCCTGGGCCACTCAGTCATCCACATTCAGGCAGTGGATGCAGACCATGGAGAGAATTCCAGACTGGAGTATTCCCTAACTGGCGTGGCACCCGATACACCCTTTGTGATAAACAGTGCCACTGGCTGGGTCTCTGTGAGCGGTCCATTGGACCGTGAGTCTGTGGAACATTACTTCTTTGGTGTGGAGGCCCGGGACCATGGCTCGCCCCCACTCTCAGCCTCAGCCAGCGTTACAGTGACTGTGCTGGATGTTAATGACAATCGGCCTGAGTTCACCATGAAAGAGTACCACCTCCGACTGAATGAAGATGCGACTGTGGGCACCAGTGTGGTCAGTGTGACTGCTGTAGACCGTGATGCCAACAGTGCCATCAGCTACCAGATCACAGGAGGTAACACTCGGAATCGCTTTGCTATCAGCACCCAGGGGGGTGTAGGTCTGGTGACGCTGGCCCTGCCCCTGGACTACAAGCAGGAACGCTACTTCAAGCTGGTGCTAACTGCATCTGACCGTGCCCTTCATGATCACTGCTATGTGCACATCAACATCACAGATGCCAACACTCACCGGCCTGTGTTTCAAAGTGCCCACTACTCAGTGAGTGTGAATGAGGATCGACCAGTGGGTAGCACCGTGGTGGTCATCAGTGCCTCTGACGATGATGTGGGTGAGAACGCTCGCATCACTTATCTCCTGGAAGACAACCTGCCCCAGTTCCGCATTGACACGGACTCAGGGGCCATTACCCTGCAGGCCCCCCTGGACTATGAAGACCAGGTTACTTACACACTGGCTATTACAGCTCGGGACAACGGCATCCCACAGAAGGCAGACACTACTTATGTGGAGGTGATGGTCAATGATGTGAATGATAACGCTCCGCAGTTTGTGGCCTCCCACTACACAGGGCTGGTCTCTGAGGATGCCCCGCCTTTCACCAGCGTCCTGCAGATCTCAGCCACTGACCGGGATGCTCATGCCAATGGCCGGGTCCAGTACACTTTCCAGAACGGGGAAGATGGGGATGGAGATTTTACCATTGAACCCACCTCTGGCATTGTCCGCACCGTGAGGCGGCTGGATCGGGAGGCGGTGCCAGTGTATGAACTGACTGCCTACGCAGTGGACCGAGGTGTGCCCCCACTCCGGACTCCAGTTAGCATCCAGGTGACAGTGCAGGATGTCAATGACAATGCACCGGTCTTCCCAGCTGAGGAGTTTGAGGTGCGAGTGAAGGAGAACAGCATTGTGGGCTCGGTGGTGGCCCAGATCACTGCGGTGGATCCGGATGAAGGCCCCAATGCTCATATAATGTACCAGATCGTGGAAGGGAACATCCCTGAGCTGTTCCAAATGGATATCTTCTCGGGAGAGTTGACGGCACTCATTGACCTGGACTACGAAGCTCGCCAAGAATACATAATTGTTGTGCAGGCCACATCAGCCCCTCTAGTCAGTCGGGCCACTGTACACGTCCGCTTGGTTGACCAGAATGACAACAGCCCTGTGCTCAACAACTTCCAGATCCTCTTCAACAACTACGTATCCAACCGCTCGGACACCTTCCCCTCAGGCATCATTGGACGCATCCCAGCTTATGATCCAGATGTCTCTGACCACCTCTTCTACTCCTTTGAGCGGGGCAATGAGCTGCAGCTGCTGGTGGTAAACCAGACCAGCGGAGAGCTCCGACTCAGCCGCAAACTAGACAACAACCGCCCACTGGTGGCCTCCATGTTGGTGACTGTCACAGATGGGCTGCACAGTGTGACGGCCCAGTGCGTGCTTCGCGTGGTCATCATAACTGAGGAGCTGCTGGCCAACAGCCTCACCGTGCGCCTGGAGAACATGTGGCAAGAACGCTTCCTGTCGCCACTTCTGGGCCACTTCCTGGAAGGCGTGGCTGCGGTACTTGCCACCCCCGCCGAGGACGTCTTCATCTTCAACATCCAGAACGACACGGACGTGGGGGGCACCGTGCTCAACGTGAGCTTCTCGGCGCTGGCGCCCCGCGGGGCTGGAGCCGGCTCTACAGGCCCCTGGTTCAGCTCCGAAGAGCTGCAGGAGCAGCTGTACGTGCGCCGCGCCGCCCTGGCCGCTCGCTCGCTGCTGGACGTGCTGCCCTTCGACGACAACGTGTGCCTGCGCGAGCCCTGTGAGAACTACATGAAGTGCGTGTCGGTGCTGCGCTTTGACTCCTCTGCGCCCTTCTTGGCCTCCGCCTCTACGCTCTTTAGACCCATCCAGCCCATCGCAGGCCTGCGCTGCCGCTGCCCGCCCGGTTTCACGGGAGACTTCTGCGAGACGGAGCTTGACCTCTGCTACTCCAACCCCTGCCGCAACGGCGGCGCCTGCTCACGGCGTGAGGGCGGCTACACCTGCGTTTGCCGGCCGCGCTTCACGGGCGAAGACTGCGAGCTGGACACGGAAGCCGGACGCTGCGTCCCGGGCGTCTGCCGCAACGGGGGCACCTGCGCCAACGGGCCGGACGGCGGCTTCCGCTGCCAGTGCCCGGCGGGCGGTGCCTTCGAGGGTCCGCGCTGCGAAGTGGCGGCGCGCTCCTTCCCACCCAGTTCTTTCGTCATGTTCCGCGGCCTTCGACAGCGCTTCCACCTCACGCTGTCCCTCTCGTTTGCCACGGTGCAGCCCAGTGGGCTGCTCTTCTACAACGGACGCCTGAACGAGAAGCACGACTTCCTGGCCCTGGAGCTCGTGGCTGGGCAAGTGAGGCTCACATATTCCACCGGTGAGTCCAACACAGTGGTCAGCCCCACGGTTCCAGGGGGCCTCAGTGACGGGCAGTGGCACACAGTGCATCTGAGATACTACAACAAGCCCCGGACAGATGCCCTGGGGGGTGCTCAGGGCCCCTCCAAGGACAAGGTGGCTGTGCTGAGCGTGGATGACTGCGATGTGGCTGTGGCTCTGCAGTTTGGGGCTGAGATTGGCAACTACTCATGCGCGGCTGCCGGCACGCAAACAAGCTCCAAGAAGTCCCTGGACCTGACAGGCCCTCTGCTCCTGGGGGGTGTCCCCAACCTTCCCGAGAACTTCCCCGTGTCCCACAAGGACTTCGTTGGCTGCATGCGGGACCTGCATATCGATGGCCGCCGAGTGGACATGGCGTCCTTTGTCGCAAACAATGGCACCGTGGCAGGCTGCCAGGCCAAGCTGCACTTTTGTGACTCGGGCCCCTGCAAGAACAACGGCATCTGCTCAGAACGCTGGGGTGGCTTCAGCTGCGACTGCCCGGTGGGCTTTGGAGGCAAAGACTGTCGGCTCACTATGGCCCATCCCCACCATTTTCGTGGCAACGGCACACTGAGCTGGGACTTTGGAAATGATGTGGCCGTGTCTGTGCCATGGTACCTGGGGCTGGCGTTTCGGACGCGGGTGAAGCAGGGGGTCCTGATGCAAGTCCAGGCTGGGCCACATAGCACACTCCTCTGTCAGCTGGATCGGGGGTTGCTGTCTGTAACAGTGACCAGGGCCTCAGGCCGGGCTGCCCACCTCCTCCTGGACCAGATGATAGTCAGTGATGGCCGGTGGCACGATCTGCGGCTGGAGCTGCAGGAGGAGCCAGGTGGCCGGCGGGGCCACCATGTCCTCATGGTCTCATTGGACTTCAGTCTCTTCCAGGACACTTTGGCAGTGGGGAGTGAGCTGCAGGGCCTGAAGGTAAAGCAACTCCATGTGGGAGGCTTGCCCCATGGTGCTGAAGAGGAGGCTCCTCAGGGTCTGGTTGGCTGTATCCAGGGAGTATGGTTTGGCTCCACGCCTTCGGGGTCCCCAGCCCTGCTTCCCCCAAGCCACCGGGTGAACGTGGAGCCTGGCTGTGTCGTGACCAACGCCTGTGCCTCTGGACCCTGCCCTCCCCACGCTGACTGCCGAGACCTCTGGCAAACCTTTTCCTGTACCTGCTGGCCAGGTTACTATGGCCCGGGCTGTGTGGACGCCTGCCTCTTGAACCCCTGTCAGAACCAGGGGTCATGCCGGCATCTCCCAGGGGCCCCCCATGGCTATACCTGCGACTGTGTAGGTGGCTATTTCGGGCACCACTGTGAACACAGGATGGACCAGCAGTGCCCTCGGGGCTGGTGGGGGAGCCCGACATGCGGCCCTTGCAACTGCGATGTTCACAAGGGCTTTGACCCCAACTGCAACAAGACAGACGGGCAGTGTCACTGCAAGGAGTTCCACTACCGACCGCGGGGCAGTGACTCATGCCTGCCGTGCGACTGCTACCCAGTGGGCTCCACCTCACGTTCCTGCGCCCCCCACAGTGGGCAGTGCCCCTGTCGCCCAGGAGCCCTTGGCCGCCAGTGCAACAGCTGTGACAGCCCTTTTGCAGAAGTGACAGCCAGCGGCTGCCGGGTGCTCTATGACGCCTGCCCCAAGTCCCTGAGGTCTGGTGTGTGGTGGCCGCAGACCAAGTTTGGCATCTTAGCCTCAGTGCCCTGTCCTCGGGGGGCCCTAGGTGCGGCCGTGCGGCTGTGCGACGAGGACCGGGGTTGGCTGGAGCCTGACCTCTTCAACTGTACCTCCCCAGCCTTCCGAGAACTCAATCTGCTGCTGGATGGCCTGGAGCTGAATAAGACGGTCCTGGACACGGTGGAGGCCAAGAAGCTGGCTCAGAGGCTGCGGGAGGTGACCGGCCACACCGACCACTACTTCAGCCAGGACGTCCGAGTCACTGCCCGCCTGCTGGCCCACCTGCTGGCCTTTGAGAGCCGCCAGCAGGGCTTCGGGCTAACAGCCACACAGGATGCCCACTTCAATGAGAATCTGCTGTGGGCCGGCTCTGCACTGCTCGCTCCAGAGACCGGGGACTTGTGGGCCGCGCTGGGGCAGCGGGCCCCCGGAGGCTCCCCGGGCAGCGCCGGGCTGGTGCAGCGCCTGGAAGAGTACGCAGCCACGCTCGCGAGGAACATGGAACTCACGTACCTGAACCCCGTGGGGCTGGTGACACCCAACATCATGCTCAGCATCGACCGCATGGAGCACCCCAGTCCCACCCGGGGGACTCGTCGCTACCCTCGTTACCACAGCAACCTTTTCCGGGGCCAGGATGCCTGGGACCCTCACACGCATGTGCTGCTGTCTTCCCAGGCCCCACGGCCATCCCCCGCTGAAGTTCTGTACCCCAGCGGCAGCAGCATGGAAAATGCCACCACCTCGAGCATGGCACCCCCACCAGCCCCTCCAGAGCCCGAGCCCGAGCCTGGGATCTCCATTGTCATCCTCCTGGTTTACCGCACCCTTGGGGGGCTGCTCCCTGCCCAGTTCCAGGCCGAGCGCCGGGGTGCCAGGGTTCCCCAGAACCCAGTTATGAACTCCCCGGTGGTCAGTGTGGCTGTGTTCCACGGACGCAACTTCCTACGAGGTGTCCTGGAGTCCCCTATCAGCCTGGAGTTCCGCCTGCTACAGACAGCGAATCGCAGCAAGGCCATCTGTGTGCAGTGGGACCCGCCTGGCCCGGCGGACCAGCACGGCTTGTGGACTGCACGGGACTGTGAGCTGGTGCACAGGAACGGATCCCACGCACGGTGTCGCTGCAGCCGGACGGGCACCTTCGGGGTCCTCATGGATGCCTCCCCCCGTGAGCGGCTGGAGGGTGACCTGGAGCTTCTGGCGGTGTTCACCCACGTGGTCATGGCAGTGTCCGTGGCTGCGCTGCTGCTGACCGCGGCTGTCCTGCTGAGCCTGCGCAGCCTCAAGTCCAACATGCGGGGGATCCATGCCAACGTGGCTGCCGCCCTGGGGGTGGCTGAGCTCCTGTTCCTGCTGGGGATCCACAGGACCCAAAACCAGCTGCTGTGCACCGCGGTCGCCATCCTCCTGCACTACTTCTTCCTGGGCACCTTTGCGTGGCTCCTCGTGCAGGGGCTGCACCTCTACCGCATGCAGGTGGAGCCCCGCAACGTGGACCGCGGCGCCATGCGCTTCTACCACGCCCTGGGCTGGGGCGTGCCTGCCGTGCTGCTGGGCCTGGCCGTTGGCCTGGATCCCGAGGGCTACGGGAACCCTGACTTCTGCTGGATCTCCATCCACGACCCCCTCATCTGGAGCTTCGCTGGCCCTGTCATCCTTGTGCTCGTGATGAATGGGACCATGTTTCTCCTCGCGGCCCGCACATCCTGCTCCACTGGGCAGAGGGAGGCCAAGAAGACCTCTGTGCTGACCCTTCGCAGCTCCTTTCTGCTCCTTCTACTGATCAGTGCCTCCTGGCTCTTTGGCCTTCTCGCGGTCAACCACAGCATCCTGGCCTTCCACTACCTCCACGCTGGACTCTGTGGGCTCCAGGGCCTGGTGGTATTGCTGCTCTTCTGTGTCCTGAACTCAGACACCCGGGCTGCCTGGACACCAGCCTGTCTGGGCAGGAAGGCAGCGCCCGAGGAGGCCAGGCCGGCGCCTGGGACGGGGCCTGGCGCCTACAACAACACGGCCCTCTTTGAGGAGAGCGGCCTCATCCGCATCACTCTCGGTGCCTCCACTGTCTCCTCGGTGAGCAGTGCCCGGTCCGGGCGGACCCAGGACCAAGACAGCCAGCGGGGCCGCAGCTACCTCAGGGACAACGTCCTGGTTCGACATGGCTCGGCTGCTGACCACACTGACCATGGCCTCCAGGCTCACGCTGGCCCCACTGACCTGGACGTGGCCATGTTCCATCGAGATGCTGGCGCAGACTCCGACTCTGACAGTGACCTGTCCTTGGAGGAGGAGAGAAGTCTGTCCATCCCATCCTCAGAAAGTGAGGACAATGGCCGGACACGGGGCCGTTTCCAGCGTCCACTCCGCCGGGCAGCCCAGAGCGAGAGGCTCCTTACCCACCCCAAAGACGTGGACGGCAATGACCTCCTGTCCTACTGGCCAGCCCTGGGGGAGTGCGAGGCTGCTCCCTGTGCTCTGCAGACCTGGGGCTCTGAAAGGCGCCTGGGGCTGGACACCAGCAAGGACGCAGCCAACAACAACCAGCCCGACCTGGCCCTGACCAGTGGCGATGAAACCTCCTTGGGTGGGGCCCAGCGCCAGAGAAAAGGCATCTTGAAGAACCGGTTGCAGTACCCGCTGGTGCCACAGACCCGAGGCGCCCCTGAATTGTCCTGGTGCCGTGCTGCCACCTTGGGCCACCGTGCAGTGCCGGCTGCCTCCTACGGTCGCATCTGTGCCGGTGGGGGCACCGGCAGCCTATCGCAGCCCGCCAGCCGCTACTCTTCCCGAGAACAGCTGGATTTGCTCCTGCGGCGGCAGCTGAGCCGTGAGCGGCTGGAGGAGGCCCCCGCCCCGGTCCTGCGTCCCCTGAGCCGGCCAGGTTCCCAGGAATGCCTGGACGCTGTGCCAGGCCGCCCGGAGCCCAGGGATCGGGGAAGCACCCTACCACGGCGGCAGCCACCCAGGGACCACCCTGGTGCCACGGCGGGCCGCTTCGGGTCACGGGATGCGCTGGACCGAGGGGCACCCTGCGAGTGGCTGCGCACGTTGCCCCCGCCCCGGGGTGCCCGGGACCTTGACCCACAGCCCCCGCCTCTGCCCCTGTCTCCCCAGCGGCAACTCTCAAGGGACCCCCTCTTGCCATCCCGGCCCCTGGACTCTCTGTCCAAGCGATCGAACTCAGGGGAGCCGCTGGACCACGCGCCTAGCCGGCACCCCTCACGAGAAGGCCTTGGGCCACCCCCGCAGCTGCTCAGAGTCCGGGAAGCGCCCGCCAGTGGCCCTAGCCACGGACCCTCCACAGAGCAGCTAGACATCCTCTCCTCCATCCTTGCCTCCTTCACCTCCTCGGCTCTCTCCTCCTCCGTGCAGTCCTCAGGCACACCCTCGGGCCCTCACACCACCCCCACCCCTTCTGCCACTGCCTCTGCGCTCGGACCCTCCACGCCACGCTCCGCCACCTCCCACAGCATCTCGGAGCTGTCTCCCGACTCAGAAGTTCCCAGAAGTGAAGGTCACTCCTGAGGAGCGGCTGAGCAGAAGAGGACCAGCGGGGAGCGATGGAGGATCTGGGCTAACAAAAGTGACTCCAGACTCGGGACTCAGCCTCCCACAGCCCCGCCCCCAGCTCTCCCTTTTGCTGCAGCACTGACTGTCCATGCTCATCTGTGAGCGTGTGCAAGTGTGTAACAGGCGCGGGGAGTGAGGGAGCCGGGGAAGGACTTTTATACATTTTGTACCTTTGTAACCAGAGAGATATGCTTATGTTATTTTTCAGCTTTTCTGTCTCCCGAGGTTCTGAGGCTGGGCTGGGAGGGGGAGGGGGACAGAGGGGAAAGAGGTACAGAGTTTGGGCCCATTTGGGTCCCTGGCAAATTATTGGCTCTTTCCTCTCATCTTAACGGGGAAGATTCAGACAGGAGGGGTAAATGCACCCCCACCCCCCATTCCCTGGTTGATCTGCATACTGTCGGGGCCCCAAGTGCAGAATTAATCTTTGCTTTTGCTTGGATGTCCCACAGGGCACACTTTGGGGACTCGGGGAGGGGGGGTTGGTCTTGAAAACGGGTCCTCTGACCTCCTCACAGGGGCTCGCTCATGCTGCCCCTCCCCGTGGATGTGTGTGTTTATTATGCGGAGTCCCTGCCACTTACTGCCTTATGTCCCAGGACTGATGCTGTGGGGCGCTGGTGGATGAGCAGATGTCATGTTTACAGATCTAGGCTTCCCTTCTCCCACGGGGAGGGGCTCAGGCCTCTATTCAGACATTCCTTCAGAGGGTGGATGGAGTCCTCGCAACCCCTGCCCCTGCCGCGTACAAATGTCGTGGTGCCATTTGGTTCCCTGACACTGCCCCCTGCTAGGATTTATTCTGAAGGGTGATGTCGGAGGGGGAGAAAAGGGAGCAGAAACAAGGGAATTAAAGACTCAGAATGTAGGTGCCACTGCCTCCCATGTTTACAGGAGCCTCCCTGGCCCCAGGCACCCGGGCTGCAGGAAGTGACTCAGTTCCATCTCTCCTTGATTCCCTTGTAAAGGGAAAAACGACTGTTAGGACCCAGTTCACAAACTCTCACTTTTTTTACTTCCTCTCCTGTCCAGAACTGGGGGCTTTGACATTTTGTTACTTTGTTTACAGGTCAAGAGTTTAAAACAGTTTTTACACTTTGTTTACAGTTTAAAACTTTGTGAACTTTTTGTTTACAGTTGAGAATGTTTTGTTTGTTTTTTTTCCCCCTTTGTTTACAAGTGAAAGGTAGAGAAAGTGGGAGAGGGGCTTGGAGGACCCACCTGTGAGGACCCTGAACCTGGCCATCTTGAGGGCTTTCTAACCCCCTAGTCGTCTCAGGCCAAAGGTCAGCCCTGAGTCCCCTGTTGAACAGCAGGCCCAGAAGGCCCAGTGGTAAGTGTAGGCATCTTCTTACCACTAGGAACTGCAGCCGTGCAGGGCTGTGGAAGGTCTGTGCAGATACCCACCTCCTTCACGCATACTCTTGGGAGGCAGTTTTTAAGGAGATTAAAAGTTCTACTTTACTGACTGGTGCCAAATCCCGCCAGCCAGGACCCCAGCTCTCCTTACCCAGAGTGACCCCAGCCCTTGAAGGGTTGAAGGGTCTGCTGTGGGGAGAGGGGGTTGTCCTTGCTATGTCCTAGGTTCTGTAGCTGCCCCTCTCTGGGAGGGGGAGTCCCCCCTCCAGCCCAGTGGCTCCTTTTCCTGTCTGTGTAAATTGTTCCGTGAAGCCGCGCTCTGTTTTGGGAATAAACTTCTATAGAAAA EMBV3_12581 CAAGGGAGTTGTTCCTGGAAGATGTCCAATGAGTGAGAAAGTCTGACACCACCAAGTATA Gene BVV0102_097894 + 0 NULL GK000023.2:37912318-38952206 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133352 TCONS_00133353 TCONS_00133350 TCONS_00133346 TCONS_00133351 TCONS_00133361 1 XLOC_081094 NonCoding TCONS_00133361 XLOC_081094 NonCoding NonCoding - 23:38131588-38141726 - TSS99616 2871 2 TCONS_00133361_3 59 0.259491466388018 2 0.716977409489987 0.000364582244434287 0.000220479294281801 0.000215910668155541 4.71639727894921e-05 0.000178199052765482 1.83161372344189e-82 0.000159768725259739 0.000433959878342175 9.93949528480184e-05 0 0 6.22349390779985e-06 1.06490589637939e-116 0 0.000126452349220635 0 0 0 0.000187433763016125 0.000346818387207192 8.22338393777859e-09 0 0 0 0.000253760246248575 0.000157274564129522 0.000227416215296096 0 0 0 XR_232761.1 LOC786451 PREDICTED: Bos taurus F-box only protein 16-like (LOC786451), 9e-58 230 87.77 0.06478578892372 0 noncoding GCAGGAGACGCGGGTTCAATCCCTGGATCAGGAGGATCCCTTGGAGAAGTAAAGGCAACCCACTCCAGTATCCTTGCCTGGGGAATCTCATGGACAGAGGAACCTGATCTGATCTTGGAGCTTGAAGGCATGGATTTGAACTCTAACTATATCCTTCCAGCTGCATGACCCGTAACTTAGACTCTTGGAACTCACATCCCACATCTGTGGAAAAGGGGTAATAACAATACTCTTTCCTCCAGAATGAACGAGATAATATATGTAGAAGGACTTTACAGATCAACACTAAACCGTTTCTGCCACATCCAACATTAGTGCTTTGCACCAGTCTTAAGAAGTTCTTAACAAAAAAATCCTCTGCAAACTCTAATAACAAACTCTCCTAAGGCAAGAAGTGAAAATATTAGGATTTGGCATATCACCTTGGAAAGATAGCCAACTCTGCACTGGATCATCTTTGGAAACCAGTGAGAACTGCTCTTTTATTGTTTGCTAAATTTAGATATGCAAGACACATGAAATTGAAGGTTCTGTAAACCTAGTGTTTGTAAATTATTTTAAAATAAGTTTCCTAGACTTTTAAGCCACTCTGAATATTTAAGCCTGACAATATGTTTGATACAACGTATAATGAGTACAGAAATTACAAACTACGGGCTGTCTCACACGTTCATGTTGGTCTGAAATAGCCTTTAGAAACAAGTAAAAACCAGACATGAGAACATAAGAAAAAGTCAGACACAGCAGTGTCTATCTTGAGTGAAGTCTTGGTATTAAAATTTTAGATGAATGGAACTAAAAACCTTAGAGAATTCTGTCAGTTGGAATGTAAAAGTATTTCCCAAAATTTATTTATCTCATACTCTAGCCTTATATCTGTTCTATAAAATAGAGAGCTCACAATATTGATGTTTTATATAAAAGAAGAATGTTACTTTTAAGAATATTACTCTTTTTACTTTGTGGGAAGATTTCAGATTGTGGTCATCAAGGGAGTTGTTCCTGGAAGATGTTCAATGAGTGAGAAAGTCTGACACCACCAAGTATAATTAGAGATGTTAAGAGTTGGAATTTTTCTCTAATTTATGTGTTTTTAAAAAATTTTTTGAATGTTGGTCTTCAGTCAAAAGTGCATTTGAAATGCACTCTAAGCTAAAGTGGTTTAAAAGGTTTTAAAATTTGATGCTGGGAAAGATTGAAGGCAAAAGGAGAAGAGAGCAGCAGAGGATGAGATGGTTGAATGACATCACAGACTCAATGGTCATGAATTTGAGCAAATTACAGGAGAGAGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCCATGGGGCTGCAAAGAGTTGGACACGACTGAGTGACTGAACAACCACAACAGTAGCAATGTTATAAATACCTCTGGTGCGGATGTGACTAATACCTTTTGCTCTGCTGCACTGAGTCAAAATTCTCCCTCGTAATAACAGTGCGTTGCTTCAAGCTGGCTAAGGAACAGTTGAAACTCTTTGAAGAGCTTGTGTGATGTTTGGAACTTACTCCACCTAAGATCTGTAGATTTCTGGAAGCCCTGTCCCCTGTTCAAAATGGTCAAAAGGAAGCAAGAGAATCACCAAGTTGACCATGGTCTGGGCAACTCCGAGGAGTCTTCAAATATTTATATTGCATCTATGCTTCAGCTAGGAGGAGGGCAGGAGGAGAAGGGGGCGGCAGAGGATGAGATGGTTGGATGGCATCATTAACTCAATGGACATGAATTTTAGCAAACTTTGGGAGATAGTGAAAGACAGGGAAGCCTGGCATCCATGGGGTACAAAGAGTTGAACATGACTTAGCGACTGAACAGCAAGAAATAGTGGAAGATGAAATGCTGCAGTCAGGAGTTAACAAATTTTTTTCTATAAAAGGCTAGAGAGTAACTATTTTTGCTTTCAAAGGCCATATGATTTCTGTTATAACTGCTCAGTCCTGTCATTATAGTGTGGAAGCAGCCACAGTCGGTATGTAAACAGACAAGCATATCTGTGTTCCAATAAAACCTGCTAAAAAGAGGCAAGAGGGCAGATTTGGACCGAGGGTTATAATTTGCTCACACACACCTGTTCTAGTGGTAGCTTTATCACTGCTTAACGTTTTTAAACTTTCTTTTCCCCATGGAGAGGATTGGGACCAACACAGACAATCATAGAGAGATTAATAACCATTAAAATTCAAGACAAGGGCTCAGACATATCGCTGTAGCAGAAAAAGCTTCTTTGGGAGAGAGTGAGTGGTTTCCTTTCTAATCCTACAGACTTTATTCAGAGCAAATAAATAGCTGAGGTGAGAATTTAAACTCTGAAGACAATGTGACCCTCTCCTTCTTGGATGAGTCTCAGAGCCCATCCTCTGAATGTAATTATTGAGAGTTCACAGTCTATGGATGCATTGTCTATGAACTAAACAGAAACTAGCTTCCAGGAAAAATGTGGTCAGATTCTAAGACTGAGGCATCAAAATGCCAAGTAGCTGATGACTCACATTAAAAGTATCACTTTCTTTTCCCATGGCTTAAATTTAACCATTTTCCTGCTTGTTTCCACATCTAGAGAAGGACAGAAAAAGAGATCAGACAGCTAAAACAAACATTTGAGGATGACCTTGGAAAACTAGAGAGTGGCAAAAATTCTTTTTTTTTTTTTAAAGACAGGTAATAGATAGTTTGAGATAATCTGAATCTAGGCAAAAATTCTAAATAAATGGAATGATCTTTGTCACGTGATGAGTTTTGCCTTTTCTTACTCTCCCTGTCACCTCCAGTACCATGGCGCCAGTGCCACTGGGTGGACTCAAAACCTTCTCTTTGCCTTGGGTGGGGTCTGCATCTCCTGGCTTCTC TCONS_00135113 r 5' 253914 TCONS_00135113 r 5' 253914 EMBV3_10847 CAGGCGGGAAGGTGGCTACGAGAGCCTTAGGAGCGGAAAGGGGAAATTAAAAAAGAGGAA Gene BVV0102_040736 + 0 NULL GK000025.2:10740165-10743975 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146269 1 XLOC_089062 NonCoding TCONS_00146269 XLOC_089062 NonCoding NonCoding - 25:10741889-10743775 - TSS109412 764 1 TCONS_00146269_2 111 0.369109947643979 2 0.595755968169761 0 0 0 0 0 0 9.15975637782105e-05 0 0 0 0 0 3.75560742844739e-06 0 0 0 0 0.000492622511678091 0.000366055633481693 0 1.98673479490336e-05 3.88515991234094e-05 0.000228150786050707 0 0 0.000571753348605469 0 0 0 0 0 noncoding 0 0 0 0 0.133819336738822 0.404931499019931 0.0207945850697824 0.670968294287014 GTGCGTGGTTCGCTAGTCCCCGGGTGCGGTGGAGACCGACTGGGACGCCTCCCCGCCAGCCTGAGTTCACACCCCTGTGGGGGAGCCAGGCGGGAAGGTGGCTACGAGAGCCTTAGGAGCGGAAAGGGGAAATTAAAAAAGAGGAATGGGCCAAAGCTTGGGGACAAGGGAGATGGGAAGTCCCTGGGGACCTCTCTATGCAGATGACTTTAGAGTCCTGGATGGTAAGAGGAAGGCGGCCCGGGAAGATCTGCAAGAAGGGTGTTCCGGAAGGAACCTCCTGCCTGGATGGGTTGCCTGGAGCCAAAGGTGTTGCCTGAGGACGATTGATCCACTCCCAAGACTTGATCCACAAAACACTGAACTGAGGCCCCATGGGGAAATAGGGCCCCCTGTGTGTGACCTACAGCCCCGTGTGACCTACAACCCCGTGGTCTTCTGCTATTACCTTGCTTCTCTACACATCTTCTCTGGCCCCTAGGAATTTACCTTGTGGATTCAGCAGAGGTTGAGAGATCTTTAGAAGGATGCTCTCTCTGCAGCACTGTTTATAATAGAAAGTGGAAAGCACCAAAGCCAGGTTAGAGAATAGCTAAGCAAATCATGGCCCACTTCACAGTTTTGAAAATGCTAATTATAAAGGTAATGGAAACACAAGGAAAGGCCACAGATAATACAGTAATTTTAAAAAGCCGCATGCAAAATGGTCTGTACGCTATGATTACAACTGTGTCAAAATACAGTCATGTGTAGGGACTGCGATA TCONS_00144526 r 5' 1610 TCONS_00144526 r 5' 178 EMBV3_05598 TGGATGGCAGCTCCTAAAAACAGGCGCAGCATTGAAGTGAACCGGTGTAGGAGAAGAAAC Gene GeneID:532842|MRPL32:NM_001038679:43_cdna Constitutive 0 NULL GeneID:532842 4 GENE MRPL32 MGC134452 mitochondrial ribosomal protein L32 EMBV3_01350 GACCAAGAGCTACTTTGAGTTTGGTGTTACTGGGGTCAGGGTCAGTCTTTGGCTTAACAC Gene GeneID:535589|TAX1BP1:NM_001046409:16_cdna Constitutive 2 NULL GeneID:535589 4 GENE TAX1BP1 MGC128202 Tax1 (human T-cell leukemia virus type I) binding protein 1 EMBV3_25083 ATGAGGCCTCCAACCTCTATGGCATCTCAGGCCTTCTCTGCCTTTGCTGATCTGACCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18647 GCTCAGCTGGAGGGGAAGATAAGTCCCTGTGGACACTCGCACAAAACTGACTTAAAATTT Gene GeneID:512698|ANGPTL7:NM_001014909:61_cdna Constitutive 0 NULL GeneID:512698 16 GENE ANGPTL7 NULL angiopoietin-like 7 EMBV3_39535 TGTACACTCGTGCTGTCGTAGCTTGCTCAGAGTAGATGCTCCCAATGTATCAAATTGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30433 TCTGAGCAAACTCAGCCCCTCTACCTCAGGACTCAAAAGTCACGACTACCTCCCCCAGGA Gene GeneID:523206|MOV10:NM_001075839:122_cdna Constitutive 1 NULL GeneID:523206 3 GENE MOV10 NULL Mov10, Moloney leukemia virus 10, homolog (mouse) EMBV3_41771 AGGATGCTAGGGAATGCTGATTTTAGCAAAAGCCTAGTTAGAAAAGCGTGGCTTGGCACC Gene GeneID:520468|TMEM136:NM_001075806:131_cdna UTR3_Alt 1 NULL GeneID:520468 15 GENE TMEM136 MGC139257 transmembrane protein 136 EMBV3_22477 TCAACGACTGCGTGTGCGACGGCCTGGAACGGCCCATCTGCGAGTCGGTCAAGGAAAACA Gene GeneID:540336|GAS1:XM_002689821:25_cdna Constitutive 0 NULL GeneID:540336 8 GENE GAS1 NULL growth arrest-specific 1 EMBV3_41962 AACGTTTAATGCACACCAGGATGAGACGGCCAGAGCCTCATGACAGAAGGGACCATGAGC Gene BVV0102_103097 + 0 NULL GK000010.2:5410761-5552569 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015742 TCONS_00015743 TCONS_00015744 1 XLOC_008549 Coding TCONS_00015742 XLOC_008549 Coding Coding SFXN1 10:5550722-5557950 j TSS11057 2547 1 TCONS_00015742_2 77 0.0804868472712996 4 0.648125086481251 4.24723414132957e-19 1.04409838436443e-11 0.00018644743539051 5.28212179038464e-05 4.7530006148498e-05 1.88588855980137e-10 3.09809491618496e-05 1.93722390427717e-05 1.10822488532216e-08 0.000140317100865227 5.12378093535133e-09 3.24873434316082e-28 8.87322755118884e-06 3.52385876439311e-11 5.23277627997925e-30 0.000858335121047336 1.66596894645841e-11 0.00324078918294166 0 8.63440943081455e-05 8.16925332196819e-09 3.41975728294151e-08 0.000741520418091209 6.71334580854642e-05 7.61251020415908e-35 0.000112391400172976 0.000373577076949993 0.000515981782900029 8.31433136505706e-05 1.44174129572144e-05 NM_001015574.1 SFXN1 Bos taurus sideroflexin 1 (SFXN1), mRNA. 0.0 1178 99.85 0.257165292500982 NM_022754.5 SFXN1 Homo sapiens sideroflexin 1 (SFXN1), mRNA. 0.0 771 73.73 0.504122497055359 TCONS_00015742_2 sp|Q5E9M8|SFXN1_BOVIN SFXN1_BOVIN Sideroflexin-1; 2e-40 138 98.46 0.831168831168831 1 noncoding 0 0 0 0 -0.0339766269070277 0.842034908190503 0.00484590671494795 0.932537197365397 ACCCCCGGGATGTACCTTTTCGCCAGAGGAGCCTTCTCAGAGACCAGGAGGTTCCCATGGATGAGTGCACCTGTTCAAGTTGGAATAGTTGGCTTTTGCTTGGTGTTTGCTACGCCTCTGTGCTGTGCTCTGTTTCCGCAGAAAAGTTCCATGTCTGTGACAAGCTTGGAGGCCGAGCTGCAAGCCAGGATCCGAGAGACCTACCCTGAATTACGGCGTGTGTACTTTAACAAGGGGTTATAAAGCAGGTTAAGAAGCATCTTCAGAGGAGCCTGCCTGCCGCGAGCCTGGTGTACCCAAGTTGGAGAGGAATAACCTGGGCGGCTGGGTTCTCTCAGTGAAGAAACCTTTTAAAGACCCATAGAAGCCTTTAGAGTCCAGCTGCTACTTACGCCACAGCCCCTGGGGGTGGTCCAGGTGCCTCACCTGCCAGCCCCCGCCCCTTACATTTGAATCATGCTATGATTTACAGACACCCTTCCTGTAGCTTTTATAGTCACTGTTTTTTCAAAGACAATGTCCTGACTCACACCCAGAGTTTTCCAGAGTACTGCTAGGCATAGAGTTAGATGTTCAGTATATTGATTGTCAGTCAGTGAAAAGGAAATCATACTGAAATTTTATCCCACCCTTGTTTCAAATCAAGGAGAGCTGAGTAGTGAGTTGAGAAAACTCAAAAGCCCTGAGGCTAAACTGTAACAAAAAAAAAAAAAAAAGACTCGTAAATATTAAGGACAGTTTGCTTTTCTGCCCACGTTGGGCAGGAGGCAACTGAAGTAGAAGATGAATGTTTTGGATTTGTAGGATAAAAGCTCCTTCATAAACCTCCTGAAAGTCAAAGTAATAGACAAGTGTGATGCATGGAGGCTGCTGTCAATATCTGTAAGCTTTCCTATTGCTGGTGGCTTTCTTTGATTGAATTTTAAATTTACTCTGTTTTGTATTCTTATGAAGATGTTAATCTTACCTTGCACTTGTTGACTTTATATTCAGTCATTTAAATCAACTAATTAAGTAACTGAAATGCACAAATGTCAAATTTGGGGAGTATATTCAAAACCAGCACTATATGACTGGGTTGAATCTGGCTTTTTTTTTAGAATTAAGAGAATGGTCTCATCTACCTACATCTCTTTTCTTGTCCTATAAGATTTCTTTGGCTTTCAGAAAGCTACAGAAATGATGTGTATGTGAATCATTGACTCAATGGATTTTACTTGAATGTTTGTATATTACATTCCACCCTGTTGGAAAATAACCAGCCCAGGGACCACTGTTTACATCACCTGTCTTGGTTTCACAAGTAACATATTCAATGTAACTGAGATTATGCTGTAATTTATAGAGGTTCAGAGGCATATGGGAGGTGGTTATTTCAGTAAGTGTAGACCACTCAGTACGATGTGTAATAGAGACCTGTAAGTGGAAACACACGTAGAAACTAGTTTGGGCAGGTTTTTGCTGGCGATGTGAGCAGACTGAATTTCCTTATAAAAGCAGAACGGTGCGCCTCGTGTCTGTGCTTCTCTTTTCTCTGAAACGTTGAGTGGGCCTGAGGCTGGGCTACTCTGGGCCCTCCTGTGTGCTGCCAGAACCCTCTCACGGAGGTTTTCTGTCTTAAGCCATTTGAAGCAAAAGAGCTGCCCCGTGACATTCTGACCTTGGACATCTTTTGTTGCCATTTTTGCTTCGCTTTAAAAATTGGTAAAAGCTAGAAATTTGAGCCCGAGCTCCACGAGGTGCTTACAGGGCACTTTTAACAAGAAACTGAGGCAGCTCGAAGGGCTTCCCCAGTGGCTTAGATGGCAAAGAGTCTGCCTGCAATGCAGGAGGCTTGGGCTTGATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCGGGCTGCAGTGCATGGAGTCGCACAGAATCAGACACGACTGAGTGACTAACACTTTCACATTCAAGGCCCTGAAGCCTCCACCCCCCACCCCCCGCCCCCACTAACCTCACAATTCTTAGCCTTGGATAACTGGCAGCTCCACGTTAGTCTTAACCTTCACTGGAAATTGAATGACTGGTTGGAAGATTGGCAAACTAACCAAACGTTTAATGCACACCAGGATGAGACGGCCAGAGCCTCATGACAGAAGGGACCATGAGCCTGGAGATGTGTCTTTTAAAGTGTTATCTGCTGATTTTTGATGCTTTTATAGAGAAATACTAACTGTAGAGTTGAATCATGGTTTATCAAAAGGAACAAAATGAACCAAGGTTGGCAGTCTTTGCTGATCTCTTAGGAATACCTTTTCTGGAGAAAAGTTCACATGAAGTGCAATAAGCTTGTAAAGGTAAATAGTTATTAATATTTTGGGTAACATAACGAATTATAAGTATGAGCTGACTGGCAGCTTTTATTTCAGTATTAGCACAGTGTCTAGCCAGTGTTGGAGTCCGTGTATTATTTCATTTCAACCAGATGAAATGTTAAATAAACTCAGAATGAAAATAAACC EMBV3_23531 TCATCCACTCCGTCATGGGATCACTTGGGAGCAGCGCCACAAACCAGAGTCTAAAATTCT Gene GeneID:507593|TMEM188:NM_001034303:138_cdna Constitutive 0 NULL GeneID:507593 18 GENE TMEM188 MGC128598 transmembrane protein 188 EMBV3_21066 ACAGCCTGGTGTCAGTAGATTGGCTTTACTGCATGTCAGCGTGTGGACCCGAGTTTGTTT Gene BVV0102_341961 + 1 EMBV3_21151 GK000002.2:62130644-62162397 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102528 TCONS_00102527 TCONS_00102529 TCONS_00102530 1 XLOC_061887 Coding TCONS_00102527 XLOC_061887 NonCoding Coding ZRANB3 2:62148479-62178356 j TSS76319 1687 1 TCONS_00102527_4 95 0.737996443390634 3 0.943633685901727 0.00113153695351948 0.00221806680740687 0.0030449053180874 0.00172491637301145 0.00229321795540628 0.00127247778654466 0.000669534389914078 0.00110389845501725 0.00109522048601782 2.18563479595083e-19 0 1.20088264701229e-05 0.000391757108788358 0.00032094789472824 0.000103033876568686 0 0 0 0.00367336465717526 0.00242996353509297 0.00103607203762043 0 0 8.58373998505796e-257 0.00237723778274756 0.002860000539972 0.00248345485565457 0 8.74380144549898e-125 0 XM_003581840.2 ZRANB3 PREDICTED: Bos taurus zinc finger, RAN-binding domain containing 3 (ZRANB3), transcript variant X1, mRNA. 8e-81 306 100.00 0.0995850622406639 XM_005263809.1 ZRANB3 PREDICTED: Homo sapiens zinc finger, RAN-binding domain containing 3 (ZRANB3), transcript variant X1, mRNA. 2e-57 228 89.94 0.0995850622406639 0 noncoding GTGACACCACCCTGTTACCACACCTTCAACCAGTCAGAGAATTGTGCACAGCTGATCACATGCCCTGGGATGCCCCTCCCTTTCCTTGCCTTTAAAAATGGTTTGGTGAAACCTTTTGCGGATTTCAGGCTTTTGGAGCACTACACTTTCCTTCATCACAGCCTGGTGTCAGTAGATTGGCTTTACTGCATGTCAGCGTGTGGACCTGAGTTTGTTTTGGATCATCATGTCCAGAGGTCATAACATAAAAAAGTCTCTTACACCTCAAATTTCTTGTTCGACAAGTGAATCTTATAAACAGCTGGATTTTTTGCCTGACAAACTAAGAGCAAAGCTACTTCCTTTCCAGAAAGATGGCATCACTTTTGCCCTGAGAAGAGATGGCAGTGGCGGCAGACAGGATCTTGCATCTTCTTCATGATATGTGGGATCTTCAGCTGCAGCCTGCGAGATCGAGCTCCCTGACCAGAGATAAAACCCAGGACTGCTGCATTGGAGTTTGGAGTCTTAGCTGCTGGACCATTAGAGAAGTCCCCTATTTGTAGACTTTTTGATGATAGTCATCAAAAAGTGTGTGTGAGGTATGACGTGAAGACCTCATTTGGGTTTTGATCTCCGTTTCTCTAATAATTACTGGTGCTGAACATATTTTCATGTGCCTGTAAACCATCTGCATGTCTTCTTTGGGAAAATGTCTATTCAAATTTTCTGGGAGTTTTTTGTTTGGATTGTTTGGTTTTTTGATATTGAGTTGTATGAGCTGTTTGTATGTTTTGGATATTAACCCTTTGTCATATGCATCATTTGCAAATATTTTATCCCTTCTCATAGGTTGTCTTTTCGTTTTGTCAATGGTTTCCTTTGCCGTGAAAAAGCTTTTAAGTTTAATTAGGTCCTTTTTGCTTTTTTTTGCTTTTATTTATTTTGCCTTAGGAGACTGGTCCAAGAAACTATTTCTATGATTAATGTCAAAGACTGGTTTGCCTGTTTTCTCTTCTAGGAGTTTTATGGTTTCATGTTTATGACATTACTTTTATATGTAACATTTCTTTTGGTTGTATTACCTGAGCAGAAGAAATCCACATGGCAGGGAAACTAATAATGCAGAGATTCTCAGTCTTCTCCTAGCTTCTCTCTACTTCTCCCATTTGGGGTTTCATCGTTGAGCCTCGCCTCCCCTGCTTCTCCTTGCAGCCAAACTGGACCCAGGGATATTCTGGCTGCCAGTCTGTCTAGCCTGTTGTGTTGATTTAAAGAAGGGATTCTTGACCTGGTAATGCAAGTGTTCTCCTCACCTTGGAAATTCATCCTACTCTTTTGTTTCCCTGAGATGTGAAGCCAGAATGTTTTTTCTAGATATACTCCTTTAGATCTTGTTGGGCACTGGTGGTAAAGAACCCACCTGCCAATACAGGAGATGTAAGACACAAGGGTTTGATCCCTGGGTCAGGAAGATCCCTTGGAGGAGGAAATGGTAACCCACTCCAGTATTCTTGCCTGGGAAATACCATGAACAGAGGAGCCTGGAAGGCTACAGTTCTTGGGGTTGCAAAGAGTCAGACACAACTAAAGAACTTAGCACAGTTATCTTTGTTTTGCCTAGTGTTCAAATTGATTAATAACCATGTGTTAAATTTTTGAATCTGTGCTCCACTGAACTCAGTGTTATATACATTGCTTAAGTAAT EMBV3_13265 TGAAGTACGTTGACAATGTCTCTGGAATTATCAGTTCACACTTCCGGCTCAAGTGGTTTC Gene BVT0102_073004 + 1 EMBV3_12072 GK000001.2:84033891-84062773 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004390 TCONS_00004393 TCONS_00004388 TCONS_00004387 TCONS_00004392 TCONS_00004391 TCONS_00004394 TCONS_00004389 1 XLOC_001029 Coding TCONS_00004391 XLOC_001029 Coding Coding KLHL24 1:84058027-84095673 j TSS2196 6261 1 TCONS_00004391_2 368 9 0.833922167618542 2.55903269576618e-61 1.32722507451354e-13 4.2228507350549e-188 2.0847130331177e-06 1.6045297936129e-24 5.08636146531829e-07 3.41031402333652e-70 1.30933149337477e-154 8.42676057335231e-05 0.000320188662877996 0.000155791095635922 0.000108788137649358 9.67688680704301e-06 4.55443463206861e-28 1.44019905259542e-05 0.000998546630747815 0.00086168588629744 0.00129891856725348 2.48979015287709e-26 2.68008940425396e-06 2.66674447313429e-07 0.00055874634028316 6.44728321142114e-08 0.00071308665225457 1.97037098731203e-66 1.3815860778776e-41 1.87901667402239e-86 0.000260887695108818 0.000127110299644041 0.000436463829610659 XM_005201597.1 KLHL24 PREDICTED: Bos taurus kelch-like 24 (Drosophila) (KLHL24), 0.0 9506 100.00 0.841718575307459 NM_017644.3 KLHL24 Homo sapiens kelch-like family member 24 (KLHL24), mRNA. 0.0 2206 85.77 0.30218814885801 TCONS_00004391_2 sp|Q6TFL4|KLH24_HUMAN KLH24_HUMAN Kelch-like protein 24; 0.0 696 99.40 0.89945652173913 6 coding 0 0 0 0 -0.0151901794246985 0.919083414897834 0.000124234491719055 0.997897659180626 GGCTTCTTCCAGCCTTCGCCGAGAGGTGTGGAAAAACTGGGGCTTTGATCAAGCAAATGCTGGAAAGCCACATAAAGAAAATCTGTAACAGTTATTTCTCAACAATTATATAGTCAACTGATGTAACAATGGTACTAATATTGGGACGAAGACTAAACAGAGAGGATCTCGGGGTGCGTGATTCACCAGCAACAAAGCGTAAAGTTTTTGAAATGGACCCTAAATCTCTGACAGGCCTTGAGGTGGACCAGTTGATCCAGAATTCTCCTGAGTGCTATCAATTGTTGCATGAAGCAAGACGGTACCACATACTTGGGAATGAAATGATGTCTCCAAGGACTAGGCCACGCAGGTCAACTGGCTATTCTGAGGTGATAGTTGTCGTTGGAGGCTGTGAACGAGTTGGAGGATTTAATCTTCCATACACTGAGTGTTACGACCCTGTAACAGGAGAGTGGAAGTCTTTGGCTAAACTTCCCGAATTTACCAAATCAGAGTATGCAGTCTGTGCTCTAAGGAATGACATTCTTGTTTCAGGTGGAAGAATCAATGGACGTGATGTCTGGATTTATAACTCACAGTTAAATATTTGGATCAGAGTTGCTTCTCTAAATAAAGGCAGATGGCGTCACAAAATGGCTGTCCTCCTTGGTAAAGTATATGTTGTTGGAGGCTATGATGGGCAAAACAGACTTAGCAGCGTAGAATGTTATGATTCCTTTTCAAATCGATGGACTGAAGTTGCTCCCCTTAAGGAAGCAGTAAGTTCTCCTGCCGTGACCAGCTGTGTGGGCAAATTGTTTGTGATTGGTGGAGGACCTGATGATAATACTTGTTCTGATAAGGTTCAATCCTATGATCCAGAAACCAATTCTTGGCTACTTCGTGCAGCTATTCCTATTGCCAAGAGGTGTATAACAGCCGTATCCTTAAACAACCTGATATATGTTGCTGGTGGACTGACCAAGGCAATATACTGTTATGATCCAGTTGAAGATTACTGGATGCATGTACAGAATACATTCAGCCGACAGGAAAACTGTGGTATGTCTGTATGTAATGGTAAAATATATATCCTGGGTGGAAGACGGGAAAATGGAGAAGCTACAGACACTATTCTCTGTTACGATCCTGCCACAAGTATCATCACAGGGGTAGCTGCAATGCCCAGGCCAGTGTCCTATCACGGATGTGTGACTATTCACAGATACAATGAGAAATGCTTCAAGCTCTGACGCCAGCGTACCTCACCCAGGAAGCCACAGCAATCCAAGATGAGAGGTTTTAAAAACTCCAGAGTGGGAACTTGGTTTATCTCCTTTATGCCATATGCACAAAAAAACAAAAATAATAATTGTCGTGCCTTTCTCCCCCAAATACCAATCTTTTAAACTATAATAAAGCCTTTTCTGTAATTGGGGAAAAAAAAGGTAATAGTTTTGAAGGTAATAGTGGTCTTTGCTTGGGCCGTGAGAGTGTACCTTTGTGAGTATTTGTTAAAAAAAAAAAAAAAAAGCCTATGTGGCATAGGAAATAATGTTTGCCTGCATACCATTTAGGAATTTGTGAATGGTCTCTTCATTTATGTATGTTTATCTGGAAGACTGTTTATTCCTTATTTTGTCACATAAGTGTGTATGTGTGTGTATATATATGTAGAAAATTGCATGACAAGTTTTCATTTAGGTCAAATCATGTAATGCTTAGAATGCTTAGAATCATTCTAAGGAGGGAAAGACAGTTTTAAAAATCTTTTTCACTAAAAAATACATCCAAATTGATTAACTTTATTATGTTTTTTTTCTGTAATTGATAAAACAGTAATGACAACAATCTGAGTATCATAAAATACTAAGTTATTGTGACTTCATTCTTGGAATTGCTTTCTTATATTAAAGATATTTTGGGGAGAAGATACAAAAGCAAGTCCCCCTAAAATGGGGATTAAAATTAAAGATTAGTTCCTAAGAAAAAGTTATCTAAGACCCTTGAAGGAAAAATGACCCACTGTGGCTCTCAAAAGTATTTATGTATCATCTCTAAATCCTCTAAGGGAAGTGCCTTTTCTTAAACCTGGCAGAAGAGCTGAAATCCACTTTGCAATATTATCTTGTGAAAAACAGGGACAGATTTTCTCCCTAGCCCAGTAGGGTTTGACCTCATTGGAATGGTGCTTTGGGTGAGGACCTCTTCCTGGTTATCCTGTTTTCTTGTGAACAGCTAAAAATCCTGGGAGTCTCTACTGTTAAGCTGCCCTTAAAGGATAAAGCAGGGACCACCTATCTCAGTGGGTCCATATTTCTTTTAAAGTTGACTATCTGAAGAAACTAACAGTAGTAGTAGCAGTTTTCTAAGATAAATCTTCATTTGGTACCCACTGTGTGAAATGTCGATCAACATTCTCACACTTCTCTACATCAAATTGCCTTTGTCTAGATGTTTCAACTCAAGTTTATAAAGCTTGCTAGTTTTCAGAGAAGAGAGTGAAATTTTTTTTTCTAAGGCAAATGGGATGGCAGGAACTACAGCACAAGTGATTGTTGTTATTCCTGGGTAAACAGATACAATTTACAGTATTTTAGGGATGTTCCAGGTAGCCTGTTCTCTTTCAGCTTCCCAGGCATTATTGTCATCTCACATCTTAATTATATATTCCTTGCCATAGGAGAAATGATGCAAATACGTGATTATAGTGTCACCAGGTTTTTGTTAAAACCAAAGTAGTAATCAAAAACCTAACATTGATAAACTTACTCTTCTTTTCCCATTTTAGAAGATACAGAGATTTCAAATACACTATACAGTATCAACTTTAATGCCTAGCTGGATTGTGAGTTCTGAGGAAAATTCTAAAAAACTTTTAACAAATTTTAGGGAATTTTTATTTTTCAAATCATAATTTGAAATTATCTGTACCTTTTTGTGATAATTATCAAAGCAATTCATAAGCCAGTTTTCTACCATTTTAGTTGAAAGACAATAGTAGATACAATTGGGAAACCTGTTTTAATTTTAGAGTAAGCATCTACTTCTGCATCATACCCTTTGTAGGTTATGGAACCTATTTAGTTCAGAAATTCTTTGTGGTGTGTGAGATAATGTATGAGAAAAGTGTTGGTAAATGCTGAGGACTATACAAATGATACTTGTTATTTTCATGTGTATTTGTAAGGTCATGCCCATCCGTAAATATAGACACTTTCTTACAGAAAAGCCTTTCTCAGTGTAACCTATATTTTAGTACTTTTGTAAGTATTAACTATTTACTTGTATTTTGTTATATGTTTATTTTTAATATTCATGTGTTTATTACAGTAAATTTGAAATGAAATCCTATAAACCAGAATTTGTTTAAACATGGACCTTATGCCAATATTTTTAAATTTTTTTCTCTACATAATTTAAAACCACATAATTAGGTCACCAAGAACTTAGCTTGAATCCTATGAAATTAAAGTAACAATTTTTAAAGTTACCCAACAGATACTTTAATTTCCTTTCACTTCCTTTACTGATTTTTTTATAATGAGGTTAGCATAGATAAAATAATGAAGAATTTTAGGGTATAATTAGTATATCAAAAGGGATTTATCAACAAAATTGGTGTCAGATTATATTCATACTGTCATCACATAGCTGACATTTTCTTTTGGTTTGTGATGCTCATATAAGCCTTTGGGTTAGGTTAGTATGTATATACATGTGTATATATGTAGATAGATAGTATGCTCAATCTACACACATATATACAAAAACCAAGAATTTCAGCAGTTTCTGGTTTCTGATCAGAGAAAGGAACATAAAGTAAAAATTAGTTGATCTTACTAAATTCAATTCCAGACGTTGTTTTTTTTTAATATTGGGCATCTCTAGCGTGCTCTTGTACATACGAAAATATATGATGAATATTATTATGATGACTCATACAGTCAGAGTCTATATAACGCATACAATTTACAAGATCAGGAAACAAATTGGAGGGAGATACAAGTTTGGTAAACATAGCCATTGATACCTCAGTGGGAAAGGAATTCAAAAGTAGGTTTTGTGGATCAAGAGAAATGTACTTTTTTTTTTTTTTTCATGAACTTTAATCATTTTTCATGTGGTTCCTATATGTGAGTGAGCTATAACGTGATCTAATTTTTACAACAAAAAGACCTTCCTCTTCTGTTCTAATCTTCCCACTGACTTTACTGCACAGGTATGAAATGGTAGCCTATTGGATCTTTAGTAACTTTTTTTTTCCCTAGATGACTGAAACATAGGTATTTACTCCATTTAAACCAGGTGTTTAAAAAAATGATGTAAATACTCAGGGTATTAACTTGTCATTTTTGCCTAATTGGAGTGTTTAAAGTGCCATATCTAAGCAACTTTCAGTTCATAATTCTAGAGTAAATTCAGTTTGGTAAAGGGGCTTCACACGTGGTGGTGGTTAAACATTCACTTTTTTATATTTAGATGAAAATGTTTGTGGACTGATACATTTTCTCTTAGTGAATACGAATTGTTTATGTATCTCTACTGTCATACCCTTTTTGAAACTCAGGAAAGACAAAGGTTCAATTCTACTACTTTTGTCAGTATACAAACCAGGTGTGTTATTTTTCCTGTTGTCTGGATATGGCAATAGATTTTTTAAAAAGAAAGGCTGTGAGAACCCATACGTGAAAAGAGAGGATTGAATTGTTTGTGCCTTTTGTTTCTTGAGATTTATATGTGGAAAGGACATCATCTACTCCAGACTGTATTTTCAAAGAGAAGAAATTGCTATTTATGTGGTGCCAAGTGATAAAATAATGTCTCTTAAAGGCTTCCTGTGGACTGCCTTTATTTTCCTAAGCTCAAGACACCAGTTAACCTCAACATAAATTTGGCCTTTATTAGAATTTCTGTGCATTATATTGAAAGCTAGGTTTACATCACCTCACCCCATTATTCCTTTTAGTTACATAAATAAATTCACCATACCAAGAAACCAGAATGGGGCAATTTGGTTGGCCTTTAAGGCAACAGGTTTGACTAGCTAGCTATACTTATTGTCACATCTAATGCTAGGTATCAGAAACCACTTGAGCCGGAAGTGTGAACTGATAATTCCAGAGACATTGTCAACGTACTTCATACTTTTTTAAAAATGTTTTTTATGGATGTTTTACATTTGTGTGATTGCCTTAGGTATTAAATTAGTGCTAAAGATCATCATTAAAAATTTTTTTAAATAGCAGTAGTTGTAACTTATTTTATATATTGTCCCAAAGAAAAGAATTTGTTTTAATGTTTTCAAAATAACTGCATCTGTATTTGCTTATGTGCCTTAAGTTCTCTAGTTCTGTTTCAACTTTTTTTTTAATCTAAAGTTTACCTTAGATAAGTTCCATACTTATTTCCTATAAATTGCTCTTAAAATGTTTAATGAGCATCAACTATGTGGTTGCTTGGCAGGAAGGAAAATGTTAAGAAAGTGGTTTGGTGTTTGGAGTTTTACTATATTTGGGAAGGTTTTTTGTTTGATGCCAAGCTGCTTTTTAAGATTTTAAGAAAAAATCCTTGTAAACATCATCAATATCTATATCCAGTGTCAAAAAAGTAAATCTACTTACTCTTGTTCCATTCTTAGGTACTGTTTTTTTGTTTTTTCCTCTACAGACTCTTTCATTTATCTTTTTTGAAAAAGTTCTTAATCTTTCCTCCCCCAATACCCACTCCATGGTTTCTTTATTTAAATCTTGTTGAAAGTCTCTGGAGCTAATCTAAGACAACACAATTATAGAGTTGAACAAAAGCGTACTGTGCTTTACAACATGTACAGACCTGTGGCAGCCAGATGTCATTTGCTTTCAGATGCTCCAGTCTTCACAGTTAAAAAAAAAATGCTCCTTGTTTCTTTGTTTTCATCAGTTGCGGCACACTAATACTTTCATGTCTCGTCTAAAATATACTTTGTGCATAGTTTTTCTTTAATTTTTAAAAAGTTGTATCTAATAAAAAAAAAGTCTTTTAACCATTATTACTTGACTACAGTTGTATTAAATTTTATTTACCAAAAACTAATTGTTGTGTCTTAAATATATTCAAGTGGTTGTTTGAAAAAGGAATGGGGGAAATTACAAGTTAACATATGTGTTTATTGGTAAGTCCACAAAGTAACTAGAAGGCCAAACAAAAAACTGAAAACATTGGTGTGTGTGAGGAAATGGTGGCTTTTTTTAATGATTTTTTAAACTTTTAATTATGAAAGTGATCCATCACATTTGC EMBV3_31492 CAGAGCTTTGCTCTTCTGCTGACGTGGACATGATTCAGCTCCTACTTAAATTGCAGGGCT Gene GeneID:100336532|LOC100336532:XR_084114:59_cdna Constitutive 0 NULL GeneID:100336532 X PSEUDO LOC100336532 NULL dedicator of cytokinesis 11-like EMBV3_35854 AAGAGGAGTTAACCCCACGTCCAAGGTCAGGGGCAGTGGCCGAGAGTACCAGACAGCGAT Gene BVV0101_059286 + 0 NULL GK000026.2:31425088-31465603 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15735 TGCTCCAACTATCAATAGTCAGGGTCAATACCAAAATAAGAAGTCTCTGAAACCAATTAA Gene GeneID:532280|CNTLN:XM_002689571:11_cdna Constitutive 0 NULL GeneID:532280 8 GENE CNTLN NULL centlein, centrosomal protein EMBV3_31836 GAATGGTGCAACCCCAAGACGGAAGATGCCAGGGTTAGGCTGGATGAAGAAATGTTACCA Gene GeneID:518308|PRUNE2:NM_001105382:32_cdna UTR3_Alt 2 NULL GeneID:518308 8 GENE PRUNE2 MGC166262 prune homolog 2 (Drosophila) EMBV3_12847 GGCCGCCACATTCCACCTCATATCCACATCTTGTTGGCTAATGTCTGCATGCTTGCTCCA Gene GeneID:100295358|LOC100295358:XM_002693207:403_cdna Constitutive 0 NULL GeneID:100295358 15 GENE LOC100295358 NULL similar to olfactory receptor 690 EMBV3_33735 CCCTACAGTTTTACACATTTGGGAACCACTGGACTAGACGACCTGTCTGCTTCCTGCGAT Gene GeneID:504454|NT5C1A:XM_002686463:498_cdna Constitutive 0 NULL GeneID:504454 3 GENE NT5C1A NULL 5'-nucleotidase, cytosolic IA EMBV3_20981 CCATACATAGGACATGAAGTACGCGGGTCCCATCCTTGGGAGTGGTTAGGGTGTTGAGAC Gene GeneID:533428|GALC:XM_002691107:20_cdna Constitutive 0 NULL GeneID:533428 10 GENE GALC NULL galactosylceramidase EMBV3_29197 CGGCCGACAGCAACAACCAACATCTGAACGCCTACATATCCTTTGCAGACAAATTGAAGA Gene GeneID:515919|EPB41L1:XM_002692454:487_cdna Constitutive 0 NULL GeneID:515919 13 GENE EPB41L1 NULL erythrocyte membrane protein band 4.1-like 1 EMBV3_12867 CTTGGGCTGTAGAAGGTGTTTTCCTTGTTTGCCCCAAAGACCAGTCAGCCAGGGAGTTGA Gene GeneID:516107|RABL5:NM_001015612:191_cdna Constitutive 2 NULL GeneID:516107 25 GENE RABL5 NULL RAB, member RAS oncogene family-like 5 EMBV3_11734 TGCCATGAAATGAGCCTGGCTTTTCAAGACCCAGTTCCTCTGACCGTGCCTGATTATTAC Gene GeneID:537246|TRIM24:XM_002686994:851_cdna UTR3_Alt 2 NULL GeneID:537246 4 GENE TRIM24 NULL tripartite motif-containing 24 EMBV3_29733 CAGCTGGCTTACGGGATGTGACAGCGGCGTTTGTGACGCGAGCACTTTCTTTTTCTACTT Gene GeneID:534583|CNN1:NM_001046379:78_cdna Constitutive 0 NULL GeneID:534583 7 GENE CNN1 MGC137768 calponin 1, basic, smooth muscle EMBV3_37285 CCTGGGAGTGCTCAGGGTCACTGGATTGTCTGTTTCTCTGTAATTGTACCAAGGTCCTCA Gene GeneID:524973|PRUNE:NM_001035352:109_cdna Constitutive 1 NULL GeneID:524973 3 GENE PRUNE NULL prune homolog (Drosophila) EMBV3_26757 AAGGTTCCGTGAGAGAACGGTGCGAGGTCAGTGAGGTGAAGCAGCAGCCTCGTGGAAGCA Gene BVT0102_016477 - 1 EMBV3_28138 GK000025.2:26204653-26208712 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08044 GTGGCCCTGTAATCGCCACGCTGTGTACTTGTCGTTTCTGTCTTACATACGCAGACCTAG Gene GeneID:539320|ZSCAN2:NM_001101190:135_cdna Constitutive 0 NULL GeneID:539320 21 GENE ZSCAN2 NULL zinc finger and SCAN domain containing 2 EMBV3_03038 AGAAGCCGCAGCGAGCTGGAGCCGCCGGAGTAATGGAGGGGAAAATTCCAGTCGCAGCGC Variant GeneID:615197|PCNP:NM_001038205:26_cdna 71^122 2 EMBV3_35043 GeneID:615197 1 GENE PCNP MGC128940 PEST proteolytic signal containing nuclear protein EMBV3_23790 TCCTTATCAGCTCACTCGTCATTGTGGTGCCCATGGTTCTGGTCTTCATCTCGTATGTCC Gene GeneID:538552|LOC538552:XM_002685903:139_cdna Constitutive 0 NULL GeneID:538552 3 GENE LOC538552 NULL similar to olfactory receptor MOR267-8 EMBV3_36013 TGCTGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGATCAT Gene GeneID:507564|HNRNPA2B1:NM_001045975:121_cdna Constitutive 1 NULL GeneID:507564 4 GENE HNRNPA2B1 HNRPA2B1 MGC138128 heterogeneous nuclear ribonucleoprotein A2/B1 EMBV3_26702 GGCTTCTTCACGGTGCCTCCAGAGCACAGGATCGGGCCCGGGATACCCACACAGATGAGA Variant GeneID:615171|CDK10:NM_001038577:441_cdna 121^193 1 EMBV3_02715 GeneID:615171 18 GENE CDK10 MGC134436 cyclin-dependent kinase 10 EMBV3_23204 CCTGAGGATGAGGAGGAGCTGGAGAAGGAGTCCCGCCTCCTTGGATGCCTTCGTCTTCAG Variant GeneID:664655|MTX1:NM_001040608:242_cdna 522^598 1 EMBV3_12420 GeneID:664655 3 GENE MTX1 NULL metaxin 1 EMBV3_20244 ACTGGGTTAATTCTCCTGTTCTTGTGAAATATCCTTCCAAATGGCAGTGTTACTACCAAG Gene GeneID:521918|TADA1:NM_001101106:23_cdna Constitutive 2 NULL GeneID:521918 3 GENE TADA1 TADA1L transcriptional adaptor 1 EMBV3_43499 TGCCTTTTCAGCAACATGGATGAACCTGGAGATAATCATACTAAGTGAAGTAAGTCAGAC Gene BVV0102_368121 + 0 NULL GK000029.2:1354062-1379816 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03718 CAGTGTTGTCAGTGTTGTGATAGTTTCAGGTGGACAGCAAAGGGACTCAGCAAAAGGCCC Gene GeneID:618234|ZMYM6:XM_002686485:567_cdna UTR3_Alt 2 NULL GeneID:618234 3 GENE ZMYM6 NULL zinc finger, MYM-type 6 EMBV3_07148 GAGATCGTAGACTTTTTGACCGGGGTACTCACTCGTACTGAGGGGCACGTGGGCTCCGAA Gene GeneID:618190|LOC618190:NM_001099172:101_cdna Constitutive 0 NULL GeneID:618190 11 GENE LOC618190 MGC165700 hypothetical protein LOC618190 EMBV3_21881 GGCAGCTCAGATCACCAAGCTCAAGTGAGAGGCCTCTGGTGATGCACAGTGCTACAGAAA Gene GeneID:614091|LOC614091:XR_084045:338_cdna Constitutive 0 NULL GeneID:614091 23 PSEUDO LOC614091 NULL similar to MHC class I antigen EMBV3_33337 CGGTGGATTCTTCACATTTGCATTCAGGAGTCACACCCCCATCACAGCAGAGAGAAATGG Gene GeneID:613760|LYSMD3:XM_002689386:37_cdna Constitutive 0 NULL GeneID:613760 7 GENE LYSMD3 NULL LysM, putative peptidoglycan-binding, domain containing 3 EMBV3_03517 TTCTAGCTGAGCAGCAGTCCTTCAAACACAGGCAAAGTAAGCTAAGGAAGGAGGAGGCTT Gene BVV0102_180662 + 0 NULL GK000015.2:54924024-54931231 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059621 TCONS_00059622 TCONS_00059624 TCONS_00059623 1 XLOC_036468 Coding TCONS_00059623 XLOC_036468 Coding Coding RNF169 15:54840713-54927673 j TSS44714 6118 1 TCONS_00059623_3 486 0.0885910428244524 6 0.92971400315091 0.00118886663554118 0.00293548085964612 0.00135736273301525 0.00038119090502398 0.000772307808892028 0.000486076592634044 0.00107356132160686 0.000816819739942873 0.000615578562296044 1.62740861764024e-08 8.01747602178526e-06 5.92913745137874e-05 3.88631682226891e-05 0.000269860233866679 0.000345453934790782 7.14346490084958e-05 2.08505634830014e-07 0.000145474395074119 0.00151884740492536 0.00126213008002692 0.000219679108224072 3.16542902662189e-07 5.3821559010922e-05 9.37650616288491e-09 0.00168144938484031 0.000830063051014307 0.000875709841833731 5.62510364172108e-06 4.26206151004235e-06 4.68288706042107e-12 XM_002693463.2 RNF169 PREDICTED: Bos taurus ring finger protein 169 (RNF169), mRNA. 0.0 9018 100.00 0.817097090552468 NM_001098638.1 RNF169 Homo sapiens ring finger protein 169 (RNF169), mRNA. 0.0 4635 77.21 0.974338018960445 TCONS_00059623_3 sp|F1MRW8|RN169_BOVIN RN169_BOVIN E3 ubiquitin-protein ligase RNF169; 0.0 978 100.00 0.997942386831276 0 coding 0 0 0 0 -0.303328462123562 0.049186967313292 -0.00482818761574517 0.919898567443685 GTTCTCGTGGGGTTGGAACCGGGCTCTGCCCAGAGTCAGTTTGTGTTTCTGAATTTTGAACTTCGGAATGAAGTACAGGCACGATGGGTTTGGAGTCAGAAGTTTGGAGGGAGTCATAACATTTCTTGGAACAAGTTAGGGCCAGATTGGAATTGAGTTTATATTCAGAGCGCCAATCAAATTAAGCAAGCCTGGGGAATTTCGTGAGGAATATGAAAGCCTGAGAAAGCTGCGAGAAGAAAAGTTACAAGAGGAGAAAACCTCTGAAGATCAAATCCACAAGTTGTTACCAGAGGACACAGAAATAGGAAAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAGCCAGTAGTACTGAAGACAAATCTAGAGCATTGTCCTGCACGCCTCTCAGATTCAGAGAATGAAGAACCTTCCCGAGGCAAGATGATACAGACACACCGCTCGGCATTTGTTTCCAAGAGCAGCTCCTACTCCTTAGCTTTCCTGGCAGGGAACCTAAATTCCAAGATGGAAAGGAGTCAGAGCTGCAGTGACACTGGTCAGGACAGAGCGAAGAGCAGACTCAGAGCAGCCCCAACCAGCAAAGCCAAGGCCACAGCCATGACCCCCACCTCCAACCCCATCATCGGTGTCCTGCTGTCTACCCGGAACCACCGCTGCCTCTCGGCTCCCGACCTAACCGTTGAGAAGCGCCTGCCCTTCAGCTCCCTGTCAGCCTTGGCTTCCTTACATAAGCCAGAGCGCTCTATCAGCCCTGAGAGTAACGACAGCATCTCAGAAGAGCTAAACCATTTCAAGCCCATTGTCTGCTCACCATGTACTCCGCCTAAGAGGCTCCCTGATGGCCGCGTGTTGAGTCCCCTCATCATCAAATCGACACCCCGCAACCTAAACAGAAGCCTGCAGAAGCAGACTTCTTATGAGGCTAGTCCACGGATCCTCAAGAAGTGGGAGCAGATCTTTCAGGAGCGGCAGATCAAAAAGACCCTTTCAAAAGCCACCCTCACCTCCCTGGCTCCAGAAACAGGGGACGACTTACTGGTCTCTGAAGTTACGCAGTCCAACAAGGAGAAGCCTCTTCTGGCTTTAAATACAAGACTGTCCAGTGGGCAAGTTCTCTCTGAATGTACGGGACCTACCGCCCCTGACCTTGATTATTTTTCCTCTGTTAGCCAGACAAAAGCAGAACAGGGCAGTGACCGTAAAAAGAACACTGAGATCCCATTGGAAACCTGCTGCTCTTCAGAACTCCCAGTGGGGGCCAGTGGGACTTCTTTGGAGAGAGAGCAGTCGGAAAGGTCAGGGTCATCCCCAGATGCCAAGTTAGATAAAACCCGTATAACAGCAAGTATGAAAATCTCAGCAGTTAACTCAGTGCTACCTAAAAACAGTGTTTTGGGTGGGGTCCTCAAAACAAAGAAACAGCTGAAGACAGTGAATCATTTTGATCTGCCTAATGGTGTTCTGGCAGACAACCTAGGTGATGAGCCACTTCCTTCCTTGCGTCGGGGCAGGAAAAGACGCTGTAAGACCAAGCACTTGGAACAAAATGGCTCCCTTAAGAAACTGCGACAAAGCAGTGGTGAGGTGGGTCTGGCCCCCACAGACCCAGTGCTGCGAGAGATGGAGCAGAAATTGCAGCAAGAGGAAGAGGACCGGCAGCTGGCTCTGCAGTTGCAGCGCATGTTTGACAACGAAAGGCGGACTGTGAGTCGGCGAAAAGGAAGCGTGGATCAGTATCTCCTGCGGTCCAGTAGCATGGCGGGGGCCAAGTAGCACCTGATGAACAGCGTTACCTGTTTTTCTCAGAGGTCTTTGAGCTTGATCATTTATCATGAAGAAATGAGTGTTCTCACTTTGGGTTTCTTTTAATGGCAAAACACTGTCAAGTATGATTCTGAGAGGTTTGGAGGCCTTTGTAGACTATATCCAAGGGAACTCTGTCTCTGCCTCCCTGTGACCCAGGCCAGAAGCACTCCTCACTCCCTAGGGTGGCCCACCCCTTAGGGTATCCAGGCCAAATCTGGCAGCACCTGCTTGGCATGAGATTCAGGAGCAGAGTGGCTAGGGTTAGATGGTAGAGGAGAAAGGGGATGCCTTCTTACATTGATAGACCTCCTGACTTTTTTCAGCAGGTGGTGTTTTAAATCAGCCTTGCAGATAAAAATTAGTTCCATCTTTTTTTTTTGTTTTTTCCAAAGAAGTGCAACAGTGTAGTTCTTTGGCAGATCCAAAAAGATTGTGTTCCCCCTTCTTACCTTTGCTTCAAGTAAATATACCTAATGAAATCAGTTTTTATGCTTCTATAAAAGTTAATTTACATTCCTTGTTTAAAAAAATAACATTTGATTAATACTATATAGTTGGCAGACCACATTCATAGTCATTGTTTAATTTGGTCTTTTCAGGAGACCTCACATGTAAGTGGTATTAGCCCCAGTTTCTGATGATGAAACTGCATTGCAGATGTTCAGGTTCTCTCAACTACTAAGGGCATACATAGCCCAGACTGATTGCTGGGTCTCCCAACAACAAATCCCATGGATTTTTTCCACACTTAAGAGGTTGCCATAATGGACATCGATCCAAGGACATACCAGGGGAGCCTAGAGAAAGCTGGCTGGGCTTTGAATATTATTGTACAAAATCCACATGCAGATAATTGAGATTGACTGGAAGTGCAAACATATACTGTACAGTTATCCACATTCCTCCAGTTTACAGCCTTCTGTTTTCCTGGGGTTCCACTCTGTTAGATAAACTGATTGGACCTCATTATTACTCTCCTTTTGGACAAGAGTTATCTGCAGTGTTGTTCTAAAATCCAAAAAATTTGCCCAGAAGTCAGGCAAGAACAGTACTGAGACTCCCTACTGTGGAAACACGGTGTCTAGCTGGATGCAGCTGGTCAATTCAGTCCCATGGACCTTTGGGGTTTATTTTCCTTAGCAGGTGACACCGTGTGTCTTTTGCATCTCTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAGTAGGGATTAGGATAGAATTTTAGGGAATCTCTGGTGGACTGGCATTCCCTGTGCATGTATGAGCTGTTACTATAAAGTCATGTGACTGGCATTTTAACAAGCCTTTCAGATCTTACATATCCCAGTGTACATTGTCCCCCTCAGGTGGCCTCAGCTGGAGGCTGCACAGTTTTTCCAATGATGTTGTCTTTGGTGAAAACATTTCTGGAACTGTCCTCAAAGTCTGGAGACATCTAGACATCTAATAGTCAAACTGGAAAGGACGTTAATGGTTGTCTACTCCAGCTTCTTCTTCTTACTAAGGCAGAAGCTAAGGTCCAGAACAATGACTCACTTATCCAGATCACAAAGGATTTACTGTATCACCTACTTTTGATTCTTCTCAGAAGATTTGCCTCCCTTCTTCTCTTTAATCTTTGGGTTATAGGAAAGATAATTTTAATTTGAAACTAGTCAGAACCTATTGGAAACCTTTGGAACAGAAAGTAGGTTATCAAGAGGGTTGGAGTCAGAAACGAGGTGCAGCTGTAAAGCAGTCAGAGCCGTTTTCTTGGGCAACTCATACACAATTCCCAGAGGAGTTCCAGAGATGTCTGAAGTACCTGGGTAATCACTGAGAGATGTGGGGCCTCCTCAGTGACTACTTTGGTGGGGAGTGTCACTCACCTGAATGTATGTGTTCTGTGTGTCTGTGCGTGCACACGTGCAGATGTGTGTTTAGAAAATATACACTCATCTCATTACTTCATTTTCATACCACTTCAGTTTTAGGTCCTCCCAGCAACACAGGCCCTCCAAAAGCCGCTGGAGGGCATATTGGTGCCCAGGATAGAAAAGCTGGCAGTGGTCTGTAGAGGGCAGGGAGGGTGACTTACTAAATGCCCTCAAAGAAGATGTCAGTTACTGCCATTTCATGGTGTTCCTTTTCGATCTTAGTAAATGTTATTGGAAGGCTAGTCTCATTGGTAGTAGCAAAGACACTTATTTTTCCACTTGTCACCTTTTTCTGTATCTCCAATAATTTGAAAAACTTTTCAGTTGGAGCTAATTTTAGTTTTTGGAAAAAAAGATGAATATTTTTAATAGAAAAGATATATATTTTAAATATTTCCCCAAACTAATACTTTCATTTTAAGAAATTGCTTAGTAGTGACAACAAGTTTTAGTGTCAGGTTACAGAATGAAAATTTGTTACGTGAATATTCCAAAAGCTGAATCCAGTTTAGTGACCCCCTACTGTGGAGCCTTGAATGGTACTGACAGTTGTTTCCAGACTTCCAGCTGAGCAGCAGTCCTTCAAACACAGGCAAAGTAAGCTAAGGAAGGAGGAGGCTTAATCTTTCCTCTTCCTGGCTTTGGAGGAGGGTAAAACCACTAAGATATTATCTCTATTTTAACATGCTTCCCATACTTAACTACTAAAACCTGAACACTTCTTTCTGAAAGAATTCCCCTCCCCTGTTGCTTAATTGTGAAGTTGGTCACAAATGGAGTTGTTGACATGAATTCTTTAGAGAAAAAGACACGGAAGGAAAACAGAATGTGGGGAGGGTTTGTGAGCTAGAATGAAAGATACGCCATCTCCCAAAACAAACATTTCTCACAAATCATTGGAATCTGCTTCACCATAGAAATTTCCCATGTTCTGTTTACTCTGTTCCTTGTGTATATGCATTGTGTTTTTTCTTATTAAAGGGGAAGTTATGAGAAGTTGGAGGATGGAGGTCATTCTAATGGGAAATCCAAGAAACACGGTTCCTGAGAACGGGGCTCAAAGCCCTTTTTTTTAACAAGTGGGAAAGATACTTTGGGAACATGTTCATGATCCATTGATTGTATCTGCTGGAAGAAGTTATCTGGGCCTGTTGGGTTGATGTCAAGTTTGGGGATTATGTATCCAGCCCCTGGCCCCTTTCATATAATTGCCTCTTTTTAGAAGGTTGATTCTTTTTGGCTGAAACTTCCCAGGAAAACCTTTTGTAAATGGCTTCATTTATTTTTTTAAATGGAATCCTTAAATTTTTGCCTGGAGGAAGCACTAGTGATGAATGCCTTCTGTGTTTTTTTGGTTGTTGTTCATTTTCTCTTAAAAATGCCCTTAAGAGATTAAAGCTGCTTGATTAATTGCTATGTGATTACAAACTGACTAAGATGGAAAGAAAGCTGCCACTGGCTTGACTGGTGATGCTGATGACCGAAGGCTGTGCTGCTCATCCTTTCTGTTCCATTTGACAGATATTTCCTGAGTTTCGAACTTTTGCCAGCCCTGTGCTGGGTCATGGATATAAAGAAGGAAAGGACAATCCGTGCTCTTGAACTCAGCGTCTCCTGGAATGTATTTGAATGTATGTGTGGCTGGAGAGTTCGTTAATGGTTTCGTAAAGGGCCATAGTGATGATCTTGGGTGGCCCATTCAAGGTACCATCTAGCACCCTTGGACATTTTAGATACCCCCCTCAGTTCTGTGAACCTGACTGCAATATTGCTTTCTGTTTCTGAAGTACTTTTACCAGAGGAGAATGATCTTTCTCCTCCCACGATTATAGGACAAGTATAGTTCTCCAGGAGCTGCTTTTAGCATAAAGCCCTGAGAAATGAGGAAGACTGTGGATCACTGACATGGCCAGAGGAGGTTCAGATCTCAACTTAGCAACCTACCAACCTCTCCACGAACCAGACCTCTCACCAAATCTGGCAGCAACTTGGGATTCTTTGCCTTTTTCTTGCACAGCTTTCCATTGAGATAGAAGGCCAGCTGGTGGTGAGGGGAAGAAAAATGAAGGCTGGATCATAATCACAAAATGTTATATAGCTGGAATGGGCATGGGAATTACCCAAGTCACACTATCCCACCTGATGCCCTCCTTCTCTTTAAGAAACAAGGAACTTGGGGTTCAGTGCCCTGTGTCATACTTTGTACTACAGTTATCTAGGGTCTGAATGAATAGTCCTCTAAGTCCTCTAAGCTGCACACACACACAATTTGCTCATGAAGGAGATATCCAAATGATTATTTTAACAGCTTTTTCTTCCTGCTTTTTTTCAGATAGAATTAAAATGTACCCAGATCCCTTGAATACACACCCAGGTAGGG EMBV3_17039 GGATCCTCCTTTGGAAAAATCTCCTAAACAAACAGGCCATGGATGGATATGTCAGGAGTG Gene BVT0102_025109 + 0 NULL GK000004.2:19009283-19451210 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180960 TCONS_00180967 TCONS_00180963 TCONS_00180961 TCONS_00180968 TCONS_00180970 TCONS_00180965 1 XLOC_110511 Coding TCONS_00180970 XLOC_110511 NonCoding Coding PHF14 4:19089645-19196595 j TSS135583 566 2 TCONS_00180970_1 59 0.128975265017668 5 0.994754509158571 0.000598710957257612 4.77074393690389e-204 1.38400787914327e-41 2.30252657606785e-51 7.70703714317873e-41 6.56196307894402e-06 2.20482653451224e-47 1.91222517786444e-36 8.3267694193467e-12 7.83697121818963e-201 1.6878424768414e-118 2.5329192293878e-05 0.000388539870430716 0.00016390001391458 1.15298345386409e-64 0.000926473886668994 0.0105679334303382 0.00239172379928963 0.000584928288628213 0.000102355863456878 0.000114841622315018 5.5591309650269e-05 0.00196172892881328 0.000542876151759213 0.000386784062555989 1.60183758621272e-177 9.19715131017851e-164 0.000395843127831402 8.41713866629378e-20 0.000649995115591256 XM_005199655.1 PHF14 PREDICTED: Bos taurus PHD finger protein 14 (PHF14), transcript 0.0 801 93.40 0.848056537102474 XM_005249909.1 PHF14 PREDICTED: Homo sapiens PHD finger protein 14 (PHF14), transcript 0.0 771 94.93 0.863957597173145 0 noncoding TTGAGGGCTCTGGACCCCTTCCTCCTTGAGGGCCCTGGACTCCTTACCAACCTACCTAAAGATTAGCTCTTCCATGGAGAACCAGAGGACGAAAACGAAGCTTCATTCCTGAGGAAGAAAAACATGAGGAAAGAGTTCCTAGAGAGAGAAGACAGAGGCAGTCTGTGTTACAAAAGAAGCCCAAGGCTGAAGATTTACGAACTGAATGTGCAACTTGCAAGGGAACTGGAGACAATGAAAATCTTGTCAGGTGTGATGAATGCAGACTGTGCTACCATTTTGGTTGTTTGGATCCTCCTTTGAAAAAATCTCCTAAACAAACAGGCTATGGATGGATATGTCAGGAGTGTGATTCTTCATCTTCTAAGGAAGATGAAAATGAAGCTGAAAGAAAAAATATATCTCAGGAGCTCAGCGTGGAACAGAAAAATTCAAAGAAATAAAGGATTTTCTGTAGTGTTTTGAGAAGTTTGCAACTTATGTAGTAGCAGATGAAATTTCTAATTGTAAAATGTTAAACTAAAATCTAATTTGCAAAATGTTCTCAATAAAGTCATTGAAAATGA EMBV3_06372 ACTGGAGCAGGTTGCTATTTCCTTCTCCAGGAAATCTTCCCTATCCAGGGATGGAACCCA Gene GeneID:516801|CLUL1:NM_001034520:116_cdna UTR3_Alt 2 NULL GeneID:516801 24 GENE CLUL1 NULL clusterin-like 1 (retinal) EMBV3_23422 CACAGGACCATATTGAAAGTTGGGGATTGCGGCTTTAAGGATTATTGTGCTCTGTCAAAC Gene GeneID:616028|NUSAP1:NM_001046571:193_cdna Constitutive 1 NULL GeneID:616028 10 GENE NUSAP1 MGC134490 nucleolar and spindle associated protein 1 EMBV3_05278 GAAAAAGAAATAGCTCAATTAAAGCATCAGGTGGCCTTAGACATGCATCTGCCAGCATTG Variant GeneID:534354|MTRF1L:NM_001046378:12_cdna 381^564 5 EMBV3_39967 GeneID:534354 9 GENE MTRF1L MGC137648 mitochondrial translational release factor 1-like EMBV3_39200 GTGGTTTCTCTGGAAAAGTTTAAAGGCAAAATTCTTCAAAGAAGGAACCAAGGTGGAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26156 ACGTGCTGATGGAACTGGGACCCAGCATCGGGCAAAAGCCCGAGTGTTTTGATGCCTTCA Variant GeneID:444881|MYD88:NM_001014382:35_cdna 365^499 1 EMBV3_02114 GeneID:444881 22 GENE MYD88 NULL myeloid differentiation primary response gene (88) EMBV3_17925 CATCTTTGGATCGCGCATGTACTGCTGACGATATGCCTTCCCCTACTTTCAGAGATACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33933 TTACAAAAGCCTTCTATCACAACTGGTAAATGCAAATAGACCTTCTATTATCCTTAGTGC Gene BVV0102_336349 + 0 NULL GK000009.2:9892836-9903175 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234644 TCONS_00234649 TCONS_00234658 TCONS_00234643 TCONS_00234650 TCONS_00234659 TCONS_00234654 TCONS_00234645 TCONS_00234647 TCONS_00234651 TCONS_00234648 TCONS_00234653 TCONS_00234652 1 XLOC_144076 Coding TCONS_00234645 XLOC_144076 Coding Coding FAM135A 9:9737425-9895066 j TSS176130 6698 1 TCONS_00234645_5 1348 0.0868916094356524 22 0.957650342552652 1.22266489563634e-07 3.57008455605369e-14 0.000197999730941038 2.9872657149407e-05 1.02703398594427e-11 1.55100893137484e-09 4.64012424158948e-15 2.42916117824293e-11 3.12447211076206e-16 1.32524956613259e-10 6.21559658221274e-65 9.25703903245177e-25 1.68342666524613e-08 2.62927210793669e-19 3.04608564997836e-09 0.00272117744626243 2.23084075548863e-10 5.42404769177228e-15 3.4212020254956e-12 2.42439325144919e-15 4.1737771501897e-15 2.27190220719304e-08 0.000286808588244017 0.00105713983690157 1.23254029681654e-21 0.000464841388719355 9.76327216912292e-05 0.000215107413935854 2.53959398585727e-06 0.00013432111403513 XM_005210639.1 FAM135A PREDICTED: Bos taurus family with sequence similarity 135, member A (FAM135A), transcript variant X7, mRNA. 0.0 7936 100.00 0.656763212899373 XM_005248748.1 FAM135A PREDICTED: Homo sapiens family with sequence similarity 135, member A (FAM135A), transcript variant X6, mRNA. 0.0 5809 88.45 0.677366378023291 TCONS_00234645_5 sp|Q9P2D6|F135A_HUMAN F135A_HUMAN Protein FAM135A; 0.0 1484 83.30 0.669139465875371 2 coding 0 0 0 0 0.00426662175248829 0.981243259209878 0.0169359915521984 0.784575424451964 CTCAGCGGCGGAGGTTGCGGTGCTGCGACGGCGATGTGAGGGGCCCGCGGCGGGATGGTGCTGACCCGGGCGGGGCCGCCTCCTTCCACAGAGACCGCGGGCTCCTCGGTTCGACGGGCGGCGGCCGAGCCGGGCGAGAGGGGGAGCACTATTATTTTAGCAAGAATCACTAACTGGAAGTGCAGCATTGGTTATTTAATGATATTAAAATGAAGTTTTGATCAGCAGAGGTGCTGTTACCAGATTTGTCTTCTGAGTATAAACTAAAAATGACTGAAGTTCAAGCAATGGTAGAATTCTCCGTGGAGCTAAACAAGTTCTACAATGTGGATTTATTTCAGAGAGGTTTTTACCAGATTCGTGCATCTATGAAAATTCCACCAAGAGTTCCTCACAGAGTAGAAGCTAGTTTGCTACATGCAGCAGGTATGACTTTAGCCTTTCCAGCTTCAGTTCATGATTCTCTGATTTGCAGTAAAACATTTCAAATTCTATATAAAAATGAGGAGGTTGTTTTAAATGATGTCATGATCTTCAAAGTTAAAATGTTGTTGGATGAAAAAAAGATTGAAGAAACCCTTGAGGAAATGAATTTTCTGTTATCCCTGGATCTACACTTCACAGATGGAGATTATTCGGCAGATGATCTGAATGCATTGCAGCTAATAAGCAGCCGCACACTGAAGCTGCACTTCAGCCTCCAGAGAGGCCTCCATCACCACGTTAACGTCATGTTTGATTATTTCCACCTTTCTGTTGTGTCTGTTACAGTCCATGCGTCACTGGTTGCGCTACACCAGCCACTGATAAGTTTTCCTCGTCCTGTGAAGACAACTTGGTTAAACAGAAATGCACCAGCACAAAACAAAGATTCTGTGATTCCTACTCTTGAAAGTGTGGTCTTTGGTATTAACTACACAAAGCAGTTATCACCAGACGGCTGCAGCTTTGTCATCGCAGATTCCTTCCTGCGTCACGCCTACCGTTTCCACTACACCCTCTGCGCTGCCCTGCTGCTGGCCTTCAAGGGGCTGCACAGCTACTTCATTATGGTAACAGAAGAGCTCCCCTCTTGTCAGAAACTAGAACTGGCCAAAGCCAACATGCAGGTCCTTTATGAGCGCCTTCTCAGAAGAAAACAGCCAGCAACCCAGAAAGACACCTGTCTAGAGGAAATGGATGTAGAAGCTCGACTTACTGAATTATGTGAAGAAGTTAAGAAAATAGAAAATCCTGATGAACTGGCAGAACTTATAAATATGAATCTTGCACAACTTTGCTCACTTTTAATGGCTTTATGGGGACAATTTCTGGAAGTTATAACACTACATGAGGAACTAAGACTATTACTAGCACAAGAGCACCATACTCTGAGGGTGCGCAGGTTTTCTGAGGCCTTCTTTTGTTTTGAACATCCAAGAGAAGCTGCCATTGCATACCAGGAACTTCATGCTCAGAGTCATCTCCAGATGTGCACCGCTATCAAAAACACTTCCTTCTGCAGCTCTCTCCCACCCCTGCCTATTGAATGTAGTGAATTAGATGGAGATCTCAATTCGTTACCTATTATCTTTGAAGATAGGTATTTAGATTCAGTTACTGAAGGTAAACTTGATATCTCCCAGGATGATAGTGAAATTGCACAAGTGGAACACAGTGTGGCATCCAGAAGCTCATCAGACGATTGCCATGATCGTCAGTCTGCCCCCACTTCAGGAGTTAGGACAATTGAAGTTAAGCCATGTAATAAAGACTGTTTCAGTGGAGAGAAAGTAACTGTTAAAATAGGACCTTGGACAGAGCTTCAACAAGATGAAATATTTGTGGATAATTTACAACTGCCCAATTTTGAGTCCTTAGACTCTAATGGTAAATCTAAACCTATGGAAATAACACTTGAAAAGGAAGCTTTGCAGGAAGCTAAGTGTCATTCTGTCGGGGAATCGTTAGCTAAGTTAAGAAATAATCAACCTGCTTCTACAAGAGAATACCACCTTGTAGTGAGTGGAGACACCATTAAGTTACCAGACATTAGTGCCACGTGTGCCTCATCTCGGTTCTCAGACTCAGGTGTGGAAAGTGAACCAAGCTCTGTTGCAGCACATCCAAACCCTGACATAGTCTTTGAAACTGTACCAGGGCAAGGTCTTTTCATCAGTGAAAGGTTATTTCCTCAGCTCTTGATGAAGCCTGACTGTAATGTAAAGTTTTCACTAGGCAGTCACTGTACTGAGAGTACAAGTGCTTTCAGTGAGATCCAGTCGTCCTTAACCTCCATAAATTCTCTGCCTTCTGATGACGAGCTGTCACCTGATGAAAATCCTAAGAAATCTGCTGTATCTGAATGCCACCTAAGTGATAGCAAAACTGTGTTAAATCTAGGAACAACTGATGTGCCAAAATGTGACGATAGGAAAAAGTCAAGTATTATTTTGCAGCAGCAGAGTGTCATATTTTCAGGGCATTTGGACAATGAAACTATAGAAATACATTCCTTAAATTCAAGCACTAAAGACCCTTTACAATTTGTTTTTTCAGATGAAGATACTTCCAGTGATGTGAAAAGTAGTTGTAGCTCCAAACCTAACTTGGACACTGTGTGTAAAGACTCCCAGAGTCCTGATAAATCCAGTGACTCTGTAGGAACCACAGTTCCATTAAGTTCAGAACTGGCTTGTTCAGGCACCCCTTGTGTCGTTTCAGGTTCCGTTTCCACCAGGGCAGATAGCAGTGAAGATAGAACTGTGAAAAGGAAAAACAGCGATGCATTAAATCCCAAACAAATGTGTTCAGAAGCCCCTGCAGTTAAAGATGAAACTTACCTGGGTACAGGTGATGCTTTTTCAGCCAGTCCTGATATGGTAAAGCAAGGGCTTGTGGAAAATTATTTTGGCTGTCAAAGCAGTACGGATGTTTCTGACACATGTGCTATTAGCTACAGCCATTCAGTTAGCCCTCAGAAAGAAACTTCTGGAAAAGAAATGAGTAGTCCTCAGCGGGATCAGGGTAAAGATGAGGAAGAGGAAGAGCAGGATCAACAAATGGTTCAAAACGGGTATTATGAGGAGGCAGATTACTCCTCTCTGGAGGCCGCGGGAGATGCTCACTGTGCAGATGGAGCTGACCTGGGAGGAGAAAGACTTGCCAAGTCTGAAAGACTGGCCGGCGACTATCTGAGCGATGGCATAACCATGCCTACTGTCTGTACTTCTGGCTGTCTGTCCTTCCCGTCTGCACCACGAGAGTCCCCTTGTGGCGTTAAGTACTCTTCTAAGAGTAAGTGTGACGCTGTTACCAAGCAGCCGAGCAGCGCCTCCCACAGCTGCACGTCATCTCTGTCCTGGTACGAAAACTCGCCAAAGCCTCAGATACAAGCCTTCCTTCAGGCAAAAGATGAATTGAAGCAACTTAAACTCCCTGGGTTCATGTACAGCGATGTTCCTCTGCTGGCATCCTCAGTCCCTTATTTTTGCGTGGAGGAGGAGGAGGAGGACCATTGTGGAAATGGAGTGCATCTCATTGTCTGTGTGCATGGCCTAGACGGTAACAGTGCAGATCTCCGATTAGTAAAAACTTACATTGAACTTGGGCTTCCTGGGGAAAGAATTGATTTTCTTATGTCTGAAAGAAATCAGAATGATACTTTTGCTGATTTTGATAGCATGACTGATCGCCTTTTGGATGAGATAATACAATATATTCAGATATATAGTCTAACAGTCTCAAAAATAAGCTTTATTGGACATTCTTTGGGCAATTTAATAATCCGTTCAGTGCTTACAAGACCACGGTTTAAATATTACCTCAGCAGGCTTCATACCTTTCTTTCACTTTCTGGACCTCACCTTGGTACACTCTACAATAGCAGTGCTCTTGTTAATACAGGTCTGTGGTTTATGCAGAAATGGAAAAAATCAGGTTCTCTTTTACAATTGACATGTCGTGATCATTCAGACCCTCGCCAAACTTTCTTATACAAGCTTAGTAATAAAGCAGGGCTTCACTACTTCAGAAATGTTGTCCTAGTGGGATCTCTGCAAGATCGCTATGTTCCTTATCATTCTGCCCGCATTGAAATGTGCAAGACAGCTTTGAAGGACAAACAGTCAGGACAGATCTATTCAGAAATGATCCACAACTTACTTCGCCCGGTTCTGCAAAGCAAGGACTGTAACTTGGTTCGATATAATGTCATCAATGCGTTGCCCAATACAGCTGATTCACTCATTGGCAGAGCTGCACATATAGCTGTTCTGGATTCAGAAATATTTTTAGAGAAATTCTTTCTGGTTGCTGCCCTCAAATATTTCCAATAGAATTAAAAACATTGGTAGAGACTTGACAATTACCTCATTCAACAATGATTAAGATAATCTATTATAATAAACTATAAATGCTGATAAGTTCTAAGAAATATTTATACCTTTTTATATGGAAGATAATTTATATCATCCATGTTTAGAGCTTTTTAAACATCAACTTTACTTTCTAGGTAATGTGCCTGTGCAATATTTTTTAATTTCATCTTTTTACTTTTCTATTACTTTTTCATATATTTTGCTACATAAGTATTTCAGTGAAACTTTAAGCCCATATGTATGTATGATTGTTTTATTATTGGCTTTCCACATTCTTTACATCAGACACATCATATTAAAGGCCATTATTGCTAGAATCACTCCCAAATCACTGCAGATGGTGACTGCAGCCATGTAAAAGACGCTTGCACCTTGGAAGAAAAGCTATGACCAATCTAGATAGTGTATTAAAAAGCAGAGACATTATTTTGGTGACAAAGGTCCATCTAGGCAAAGCTACGGTTTTTCCAGTAGTCAGGTATAGATGTGAGAGTTGGACAATAAAGAAAACTCAGCACCAAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAGTCAGTCCATCCTAAAGGAGATCATTCCTGGGTGTTCGTTGGAAGGACTGATGCTAAAGCTGAAACTCCAATATTTTTGCCACCTCATGCGAAGAGCTGACTCCTTGGAAAAGACCCTGATGCTAGGAAAAATTGAAGGGAGGCGGAGAAGGGGACGACAGAAGATGAGATGGTTGGATGGCATCACTGACTCGACGTGCTAGACAGGGAAGCTCTGGGAGTTCGTGGTAGACAGGGAAGACTGGTGTGCCGTAGTGCATCGGGTCACAGAGTCAGACACAACTGAGTGATTGAACTGAACTGAATTGCTAGAATAGCATGGGATTTTAAATTTTCTAGTATGGGGGTATTATTTAGTTAGTCATAAATTTTACTTTTAACATTTTAGTATGTTTAACTGGAAATAAAATTATGGCTGCTAAAATATATTTTTTGAAATCAACTATTTTGCCCTCTCAAACCGGGTAGTTCATATATGACAATGTTATAAAAGTTTTCTATAAAAAGTTATTATTACTGTTGCTAGTAAACATCTGCCATGCCTATTAAAATATATTTTCTACAGGTGATTTCAACATTATTTCTCATATTGACTTTTATTACTGGAACTTTTCATGTTCATGTTAGCAGCATCTAGAGATTTTTTGAATGTTTGAATGCCCTCTGCCTTGGTTTGGTTGGAATTTTGCTAAATTTGGTAATGTTGCTTGAACTTTCTGAGTACATTTCTTTAACTTTTTCATGGACTTCCTTGTATGTACATAATAATTGTTGAAATTTATGAAATACTTTTATGAATTTAGATAATTTTTAAATATTGCTAAAATTTGTTGAACTAAAGAGTAATGTAAATACAATAATTCATGGAACAAAATAATTAACTTTACATGTTTGGTGACACAGATGCAAATGTTTTGATATATGGAGATGTTAAGTCTCTTGACTTTACTCAAGGTGCTGAATAGCATTAAATTCACTATTTTCCTTTCCTGTTTTACTTGTGAAAATAACAATGCACTAAGGATAATAGAAGGTCTATTTGCATTTACCAGTTGTGATAGAAGGCTTTTGTAAATACGTATTGTAAAATTGATGCATGTTTATTTTTAGCATTGTGTTATTGCCTCTGCTGCTAATAAATGAACAAATGACTATCTGGAGGACAGCTAAAACACTCGCTTATTTTCAGAATACTAGAGGTGTATTTTTATTTATAATTGGATAGACTATATTAATTAACTTTATAGGACAGTGTGATTGTGTAACTTATACCTTTGTGAACTATTTTTATAATTTATATCATTTGCATATGTTAAAACATATTTCATTATGCTCCATAATTGTTTTTTTAAAAACAGATGAAAATTTTTGAATTGAGTAAGCAATAATATACCAAGTGCATTATAACTGGAAAATGTAAATGCATTATTCACCCTGTATTTTTGCTACACACATTTTTTCATCTTCACATTCCTTGGTCCTGAGTTTAAAATACCATACTTTTTTCTTGTATATCTTTTCATTTCTTATTTTTAACTAAAAGAAGTTTCACTTATGAGTTTGAATAATCTTCTGGGTTTATCAAAGTATTCATGCTTATTCATAATCATACTATTGTTTTTAAGGGAAAATTGCTCTTTATGATCATGGTTGGTTGATTGGATGTTTGTTGTTTTAATACAGTTTTAAAAACATATCAGTGATCATGGTTTCCAGTCCAATAAATTTAACTTCTGATTTACTAGAGAA EMBV3_15892 CCACTGTGATGGGCATATTTTAAAACGGTTTCCTCCAAGTGATCAGAACAGGGCCAGGCC Gene BVT0101_075093 + 0 NULL GK000026.2:12252746-12384051 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151451 TCONS_00151450 TCONS_00151457 TCONS_00151453 TCONS_00151454 TCONS_00151456 TCONS_00151458 TCONS_00151455 TCONS_00151452 1 XLOC_092116 NonCoding TCONS_00151451 XLOC_092116 NonCoding NonCoding - 26:12277985-12278851 - TSS113215 384 1 TCONS_00151451_1 41 2 0.558381502890173 0 0.000921500728945214 0.000341681756786975 8.29374672132536e-19 1.47953476524543e-14 1.76278015544023e-26 1.23244980649557e-85 0 2.62685744475596e-13 4.77084625853993e-09 0 0 0 6.74508556925005e-14 3.55498090566504e-10 0 0 0 1.94626248254245e-22 3.96742893262696e-10 3.90042608397319e-13 0 0 0 1.83852218804503e-13 0.000514860503893371 7.18928384673479e-11 0 0 0 0 noncoding 1 1 1 1 -0.0782107382647115 0.578695810441632 0.0310422065790222 0.603532239087711 GTGTGTTGATCTCTTCACAAATGTAGTTTCAACGTCACCTGATTCTTTCAGAAGCAGCAACTTGAACCTTCGAAACATTTAGCTCTATCTGTGTAGCAACCCTTCAGATTTCAGGCTGCTTCTAAACTAGAGGCCTGGCCCTGTTCTGATCACTTGGAGGAAACCGTTTTAAAATATGCCCATCACAGTGGTTCCTGCACAGACGTTCATTCAAGCTGCCTAGTAACCACCACCATCACTGCCTCCATGTGCTCCAGAAAGTTTCCAACCAGAAGGAAAAAAAAAAAAAAAAGAAAATCATTGCTTAGCCATGAAATTAAGCCCTGGAAAAGCATAAATTCATTGGAAATTGGATGCAGGCAATTACAATAAAGGTTAGATCCC TCONS_00151449 s 5' 25045 TCONS_00151449 s 5' 25324 EMBV3_38525 CGAGCCATGGTAGGGGAATCTGGCCTCGAGACGTGTTGAAGAAGGTCTCTCGAGGTCTTT Gene BVV0102_075180 + 0 NULL GK000012.2:38894330-39737716 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063808 TCONS_00162571 TCONS_00054133 TCONS_00142473 TCONS_00162568 TCONS_00010832 TCONS_00231771 TCONS_00218950 TCONS_00131534 TCONS_00186556 TCONS_00117596 TCONS_00240372 TCONS_00167122 TCONS_00210949 TCONS_00255144 TCONS_00231774 TCONS_00063807 TCONS_00186493 TCONS_00186490 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00149043 TCONS_00033204 TCONS_00131535 TCONS_00149042 TCONS_00231768 TCONS_00186557 TCONS_00217532 TCONS_00158314 TCONS_00230833 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00230828 TCONS_00178734 37 XLOC_038534 XLOC_099452 XLOC_031942 XLOC_086898 XLOC_099449 XLOC_006383 XLOC_141259 XLOC_132269 XLOC_080239 XLOC_112608 XLOC_071762 XLOC_147036 XLOC_101958 XLOC_129459 XLOC_158076 XLOC_141262 XLOC_038533 XLOC_112545 XLOC_112542 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_090920 XLOC_019438 XLOC_080240 XLOC_090919 XLOC_141256 XLOC_112609 XLOC_131531 XLOC_096768 XLOC_140323 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_140318 XLOC_108507 NonCoding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_30308 TGGACATGAAGGAGGAGATGATGAACGACGCCTTCGAAGGGACTGACTGCCCGTGCTGCC Variant GeneID:523847|CHMP2A:NM_001034550:46_cdna 607^823 1 EMBV3_20042 GeneID:523847 18 GENE CHMP2A MGC127087 chromatin modifying protein 2A EMBV3_28734 ACGAAACCGGTGCTGGGCGCTTCAGGCAGAGCAGTTGCAGTTCTGGAGCATGGAGTTTGA Variant GeneID:617640|PUSL1:XM_002694135:503_cdna 547^717 3 EMBV3_28968 GeneID:617640 16 GENE PUSL1 NULL pseudouridylate synthase-like 1 EMBV3_35534 AAAGAAGAGGCTCCGAGTTGACAAATGGTGGGGAAACAGAAAGGAACTGGCCACTGTTCG Gene GeneID:619061|LOC619061:XM_002699955:15_cdna Constitutive 0 NULL GeneID:619061 X GENE LOC619061 NULL similar to 60S ribosomal protein L9 EMBV3_06939 GGGGAAATGAAGAGGCTAGACTCAGATCAGCTCTGTCGAAACGCCTTACAAACCCTTTCC Variant GeneID:533548|ZNF346:NM_001105405:11_cdna 397^541 1 EMBV3_37154 GeneID:533548 7 GENE ZNF346 NULL zinc finger protein 346 EMBV3_14450 GGCCCCACCCTAACCTTCCGGATCAACAAGGTGAACCTGAACACCATCAAGCGCTGCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12276 CATAATGAAGAGAAGGAAAAGGATGCCTCTGGAGGTAAAGTGTATGTGTGCATCATGTCT Gene GeneID:787709|LOC787709:XM_002699494:51_cdna Constitutive 1 NULL GeneID:787709 X GENE LOC787709 NULL similar to P antigen family, member 3 (prostate associated) EMBV3_07801 ATTTCTATACACAGGGCGCCAGCCCAGGTCTCAGGAAGCAGCGGAATTCCAGGCAGAGTT Gene GeneID:100337413|LOC100337413:XM_002693915:8_cdna Constitutive 0 NULL GeneID:100337413 16 GENE LOC100337413 NULL glyoxylate reductase/hydroxypyruvate reductase-like EMBV3_05220 GCACCAAGGCAACCCCTGTACAACATACAGACTGTCTGTGTTAATGCTGTGCTGGAGAAG Variant GeneID:613406|SPATA9:NM_001034736:17_cdna 482^577 1 EMBV3_12458 GeneID:613406 7 GENE SPATA9 MGC127816 spermatogenesis associated 9 EMBV3_07451 CTTCGCCAGTGCCAACAGCGTGCTGGATCCCATCCTTTTCTACTTCACCCAGAAGAAGTT Gene GeneID:539703|P2RY6:XM_002693440:85_cdna Constitutive 0 NULL GeneID:539703 15 GENE P2RY6 NULL pyrimidinergic receptor P2Y, G-protein coupled, 6 EMBV3_29901 CCAAATTTTTTGGGGCTGTGATATGTGCTAACGTGACCGGAAGTTATGGTGCTGCTTGCA Gene GeneID:511345|AGA:NM_001075511:11_cdna Constitutive 1 NULL GeneID:511345 27 GENE AGA NULL aspartylglucosaminidase EMBV3_36718 TCCGGGGTGGCCTTCACCAGCGCCAAGGAGATGGTCAACGCCTCCAGAAGCATCGAGGAC Variant GeneID:506946|DTYMK:NM_001098893:17_cdna 351^548 4 EMBV3_08947 GeneID:506946 3 GENE DTYMK MGC148989 deoxythymidylate kinase (thymidylate kinase) EMBV3_18865 TTTCTCATTGCTCTAGGAGATGGCTTCTGAAAGACCTTGCAACGATGTCACCCAAACGCC Gene BVV0102_033951 + 0 NULL GK000021.2:29767392-30079533 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28658 GATGAGGGAAGGGCAGAGGTTAGAGGCCCCACCACACCTATTATCTTGTGACCATAGACA Gene BVV0102_197535 + 0 NULL GK000019.2:23249411-23261577 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03314 ATGCCGTGCACCCCAACTACCTGGACAAGCATGAGGAGAACCACAGGCCCTTATTCCACA Gene GeneID:506882|DNPEP:NM_001045952:56_cdna Constitutive 1 NULL GeneID:506882 2 GENE DNPEP MGC128181 aspartyl aminopeptidase EMBV3_34645 GGCTCCAGCCTCTCCGTTTAGTGCTCAGTTTGGGAATATACTCTGTGTGCTTCTCAGAGG Gene GeneID:768208|AOAH:NM_001078096:10_cdna UTR3_Alt 2 NULL GeneID:768208 4 GENE AOAH MGC142308 acyloxyacyl hydrolase (neutrophil) EMBV3_20003 TCAAGGAGAAAAATGCCCGCACTGATGAGAGTGACCAACTCAGTGTTCCTGAGGGTTTCC Gene GeneID:781940|LOC781940:XM_002691995:99_cdna Constitutive 0 NULL GeneID:781940 12 GENE LOC781940 NULL similar to Chromosome 13 open reading frame 28 EMBV3_00838 AGCATACAGTACTCTGTTCACTGTGCATTTCTTTTGGAAGCGTCCCAGTGTGTGCGCTCC Gene BVV0102_261705 - 0 NULL GK000010.2:78165264-78463268 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017989 1 XLOC_009152 NonCoding TCONS_00017989 XLOC_009152 NonCoding NonCoding - 10:78348945-78350515 - TSS12170 865 1 TCONS_00017989_2 74 0.69364161849711 2 0.449968132568515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.95813847400029e-08 0.00108177661493299 2.54366106204311e-08 0 0 0 0.0063846622222897 5.53204278675291e-09 1.45729943464972e-08 0 0 0 1.16945036596128e-08 0 0 XM_005220481.1 GNGT2 PREDICTED: Bos taurus guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 (GNGT2), 4e-56 223 73.62 0.465895953757225 0 noncoding 0 0 0 0 0.0899082239971733 0.402787126390412 -0.00853751505216618 0.854723377955865 GTGGGGGTCAGGGGGAGGAGGGCCTTCCAGAAGTTCTCTTCCCCCGATCCTGCTTTCTCCAGCCCCGGCTGCTGCACAGAGAGGAGAGGAGGGTAGTGGAGCGCACACACTGGGACGCTTCCAAAAGAAATGCACAGTGAACAGAGTACTGTATGCTTTTTGGGAAACAGATTTACCTTCTTAATTATGTTTTTACTTGCCCTCGGGTTAAAATTAGTTTGCCTTGCCTGAGCTGACACCAGCTTGAGTGGAAAGAGATGGTTGGTGCACTCTAGGGAAGAAAACAGGATCTGAGGGGAACCATCTGCTGCTGGGACTCTGTGAGGACGACGTCTCTGAGGACCTGCCTCTAAGGGCTGAGAGTTACCCGAGGTCACCATGACGCAGGAGCCAGATGGGCCCCAGGGTGAACAGGGGTGAACAGCCAGAGTTTGCCCCCTGTGGACAGAGCCCCCAAGCAAGAGCAGAGCTGGGCCCTGCCCAGGTAAGAGATAAAAGGCCACATCTTCCTCATTCTGGAAGTCAAGGAGACCTTCCTGATTACACATGCACAGAAGGGCTCCTTGAAGATCAAGAAGGGTGGGAGCATCGCCTCATAGTGATGCCAACCTACACATAGGCCTCTTCACTGGAATTCATCTTGGCTAAGAGATGTTCTCACACACATTGGAGGACCCCGAGATAAACCAAACCTGGATGCAGAATCAGGCAAAGCAAGATGATCGTGCAAAAGAAGCTCAGCAGAAAGGCCCTGTATAAGGGATTCAAACTACCATGAGGGCACAGCTTTTTCTCTGAGCCCACCCGTGTGTCTATCCACATGTACTCTTCTTCCTCCCAGTAAACACTTTACTTCTTTCACTAC TCONS_00014866 TCONS_00014868 r 3' 120716 TCONS_00014866 TCONS_00014868 r 3' 121466 EMBV3_42035 ATAAGTTTATGGGAACGAAGCTCTTGCTGACCTCCTGGCCCATTTTTTGGTGACCCAGAA Gene BVV0102_073622 + 0 NULL GK000018.2:64325734-64534174 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02750 GCTGTTCATCAGTAGCAGTAGCACTTAGCAGATGCTGACGGTATGGTGGTTGTAGAGACC Gene GeneID:100296060|LOC100296060:XM_002685661:420_cdna Constitutive 0 NULL GeneID:100296060 2 GENE LOC100296060 NULL hypothetical protein LOC100296060 EMBV3_22180 GAGCAGGGGAGGTTGAGTTTTCATTGGCTACGGTTCTTGTCCTCCCGAAACTTGGCACTT Gene BVT0102_106993 + 0 NULL GK000016.2:3463796-3479417 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068541 TCONS_00068542 TCONS_00068543 1 XLOC_041724 Coding TCONS_00068542 XLOC_041724 Coding Coding SLC26A9 16:3476891-3498921 j TSS51300 4725 1 TCONS_00068542_4 732 19 0.786372508965455 0.000610095342900329 0.000606595438664158 2.67901197185817e-07 1.42471878588371e-07 5.64164103053783e-05 0.000104429738868473 1.32048517230379e-10 8.98071059021447e-05 0.00017580303884196 1.82170624054644e-31 2.95842609276011e-11 0 1.90289511302009e-05 2.58765139555293e-05 3.20696117983739e-05 1.1135856977527e-05 0 0 0.000287835461507377 7.18850696883874e-05 0.000451660138589206 0 0.000120363875516646 2.83571012543368e-05 0.000126478697069233 2.19335537483406e-10 6.84873978811467e-14 0 1.43237284330954e-12 9.66947276098622e-05 XM_002693867.2 anion exchanger PREDICTED: Bos taurus solute carrier family 26 (anion exchanger), 0.0 3081 100.00 0.361269841269841 NM_052934.3 anion exchanger Homo sapiens solute carrier family 26 (anion exchanger), member 9 0.0 3067 77.47 0.810582010582011 TCONS_00068542_4 sp|Q7LBE3|S26A9_HUMAN S26A9_HUMAN Solute carrier family 26 member 9; 0.0 1289 82.43 0.998633879781421 3 coding 1 1 1 1 0.040521613960522 0.694600121780878 -0.000956282667647246 0.984262749100454 ATGAGCCAGCCCAGGCCCCGCTACGTGGTAGACAGAGCCGCATACTCTCTCACCCTCTTTGATGATGAGTTTGAGAAGAAGGACCGGACGTACCCACTGGGAGAAAAACTTTGCAGCACTTTCAGATGTTCCTCAGCCAAGATCAAAACCACAGTGTTCGGGCTGCTCCCCATTCTCTCTTGGCTCCCCAAGTACAAGATCAAAGACTACATTGTCCCCGACATTCTCGGCGGCCTCAGCGGTGGATGCATCCAGGTCCCACAAGGCATGGCATTCGCTCTGCTGGCCAACCTTCCTGCAGTCAACGGCCTCTACTCCTCTTTCTTCCCCCTCCTGACCTACTTCTTCCTGGGGGGTATCCACCAGATGGTGCCAGGTACCTTTGCCGTTATCAGCATCCTGGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTCGAAATTCCGGGTCTTCAACACCACCACCAATGAAAGCTATGTGGACACAGGGGCCATGGAGGCTGACAGGCTACACGTGTCGGCAACGCTAGCCTGCCTGACAGCTGTCATCCAGACCTTCATTGACATTTGCAAAAACCTCGCTCACACCAACATCGCCTCGCTCATCTTCGCTCTTATCAGCGGTGTGGTCCTGGTGCTGGTAAAGGAGCTCAATGCCCGCTACATGCACAAGATCCGCTTCCCCATCCCAACAGAGATGATTGTGGTAGTGGTGGCAACAGCTATCTCCGGGAGCTACAAGATGCCCAAAAAGTACCACATGCAGATCGTGGGAGAGATCCAACCTGGTTTCCCCACTCCTGTGTCGCCTGTGGTTTCGCAGTGGAAGGACATGCTTGGCACGGCCTTCTCCCTGGCCATCGTGGGCTATGTCATCAACCTGGCTATGGGCCGGACCCTGGCCAACAAGCACGGCTACGACGTGGATGCTAACCAGGAGATGATCGCCCTAGGCTGCAGCAACTTCTTCGGCTCCTTCTTTAAGATCCATGTCATTTGCTGTGCTCTCTCTGTCACTCTGGCCGTGGATGGAGCTGGAGGAAAATCCCAGGTGTCAAGCCTGTGTGTGTCCCTGGTGGTGATGATCACCATGCTGGTCCTGGGGTCCTATCTCTACGCTCTCCCCAAGTCTGTGCTAGGAGCCCTGATTGCTGTCAACCTCAAGAATTCTCTCAAGCAACTCGCCGACCCCTACTACCTGTGGAAGAAGAGCAAGCTGGACTGTTGCGTCTGGGTGGTGAGCTTCCTCTCCGCCTTCTTCCTGAGCCTGCCCTACGGTGTGGCAGTGGGGGTCACCTTCTCCGCCCTGGTTGTGGTCTTCCAGACCCAGTTTCGTAATGGCTGTGCTTTGGCCCAAGTCATGGACACTGACATTTACGTGAATCCCAAGACCTACAATAGGGTCCAAGAAATCCAAGGTATAAAGATCATCACCTACTGCTCTCCTCTCTACTTTGCCAACTCAGAGATCTTCAGGCAAAAAGTCATTGCCAAGACAGGTGTGGACCCCCAGAAAGTGTTGCTGGCCAAGCAAAAAAGCCTCAAGAAGCAGGAGAAGGGGAGAACAATGCCCAAGCAACAGAGGAAGTCTCTGTTCATGAAAACCAAGACTGTCTCCCTGCAGGAGCTGCAGCAGGACTTTGAGAACGGCTCCCCGACCGACCCCAACAACAACCAGACGCCTGCTAACGGCGCCAGCGTATCCTACATCACCTTCAGCCCTGACCGCTCCAACGCTGCCCACTGCGAGCCCCCAGCCTCTGCTAAGCCCAGTGACACACTGGCCGGCGTCCCACCCTTTGTCACCTTCCACACTCTCATCCTCGACATGAGTGGGGTCAGCTTTGTGGATCTGATGGGCATCAAAACCCTGGCCAAGCTGAGCTCCACCTATGAGAAGATCGGAGTGAAGGTCTTCTTGGTGAACATTCATGCCCAGGTGTACAATGACATCAGCCACGGAGGCCTCTTTGAAGACGGGTGTCTAGAGCGCAGTCACGTCTTTCCCAGCATACACGATGCGGTCCTCTTTGCCCAGGCGCAGGCCGCGGAAGTGGCCCCGGGACACGACTTCCAAGAGGCGCCCGTGGATCCTGAGCTTTCTCTGTATGAGCCGGAGGAGGACAGCCCCAGCTACTGGGATTTAGAGCAGGAGATGTTCGGAAGCATGTTTCACGCAGAGACCCTGACTGCCCTGTGAGGGCCCAGGCTGCCTCCAGAGCACCTCGGACGCCCGTGAAGGATGAGCCTGGGACTGCAGGGAGTGGAGGGTCGAGGAGAACACCTCCACCGGAACCCCGGTGCCTCTCCATCCTCCTCGTCTCTCACTCTTACGTCCCCCCAGGCACCTCTAGAGCTAGCCGATCTCACCAGCAGGAAGAGACACCTCTTCGCCCTCCTACTGACCCGCGGGGCCCCAACCCGCAATGAGCATGCCTCCTGCTGGCTGCTCTGCACCTGCCCACACCCTGCCTGTGGCCGCTGAGGGGACCCTTCACTGCCAGGCTCCAAGAGTGACTCGGGAATGGAGAGAAAGCTCGTGCTGACGTAGCACGCAAGCTCTGAGAGTGCCCTGAGACCCGCACGCCTCGGCGTCAGGTCATGTCACGCTGTCACAGGACACAGGGAGAAGCCGGCCCACGACTCTGTGGCTCATCCCCTCCCACCACCCCAAGTCAGTCCCCGGCAGCTCTGTACGCCTGGGCCATGGGCTCCAACCACCCAGGAATCTCCGTCTTGGCGACTGTGCCCCCTTCCTCCTCCTCTCAAGGCTGCTGAGACCCCCACTGCTATTTGGCACATCAGACTCTAGTCTGGGGAGCGGCCACCAAAAGTACCTTCCCAGGGGTAGCCTCCTGAAACGTTATCACTCCCCCTACCCTTGAGGGCTGCTCCCCTCTACTTGAGACCAGGTAGAAAGCCAGGAGGAACAGGGGGTAGCTGGCAGAACCCTCTGGCAGCCTAGCAACAGATACCAGTTATTCTACACAAAAGCTTTGGGCAGTCCCTGTACTGGAGACATGGAGGTGAAGGGACGCTCCATCAGTCCAGGGCCAACTGGTGGGGCCCAAGCCCTGACAGCCCCCCTGACCTTAGAAACACCTCCCCCACTGGAGAAGTCTGCCTTGTCCTCTTCTTTGGGAAAGAGCCAATGGTTTTAACTCTCCCTTATCAACTTGGGGCCTGAGTGGTTCAGTCAGGTGAGGGAAGATGCCTCCAAGGGCATATCCCACCTGCGTGCCCAGTGTGGAGAAGGGCTGATGCAGATTGAGTCTTCCGCCACAGGGATCCCATAACAAATTCAGGATCTGAGGCCATCTCCTTCTAGGAAAGATGAGAAGAGGGGTTAAGCTCTCCATATTTATAGAAAAACGTAGAAGAAACCCACTATTGACTTGAAAATAAATAGGTTCCATGGTCAGGTGTTTTGGGAAATTTTCCACGGAAGTGCACAGAAAACGCTCTGGCCTCACCGCACTGCATCTCCCAAGCTCCTTCGGTGAGTGATCCCTGCCCAAAGGCTGGGCTGGCCCAACCTGGGAAAACGCTGGAGTTCCTAATCTCTGCCTGACCTGCATTGTGTGTCTGTTGACCGTGAGCTGGTCAGCTAGCAAGTCTTCACAGAGTTAAAGGAGGGGGTGCTGGTGAAGAGCCAACAGATTCTTGGCCTACAAGCATTGCTTCTCTGTGAATTCATTATGCCATCTGGCTGCCAGTGGAACTCAAAACTTGGAAGGCAGAGGACAGTGTTATCTGGGATTCACCGTGCCTAGCACCCGAAGTGCCAAGTTTCGGGAGGACAAGAACCGTAGCCAATGAAAACTCAACCTCCCCTGCTCCACCTCCTGCAAAGTCCAGCTCAGGCCCAAGAGGTGGGGGAAAGATCACAGACTCTCAGGACATCCCAAGTCACAAGTGCTTTGGGAACCAAGTGTCTAGAACCCTCGAGGACTTGCTGAAGTGACTGCAAACCCCCAGGCCAGCCCCAGACATAAAGGGGATTGCTGGCACACAGGGGCCTCGAGTGGGGGCTCACGGAGGGATCCAGCACCACGTCTAAGAGTGTAAGTGCCACCAGAGTCCACGGCGGAGGTGAGGTGGGAAACACCTGGGGTGGAGAGAGACAACCGGAAGAGAACTCACTGCTGGAACGCCTTAGCGAGAACACAAACTCACACAGACCACTTACCAAACGTGACTGAGGCAGGGAAGGTGGGAAGGTAGAGAAAGCATCCACGGTTTCAAAACTTCTGAATGTTCTTAGTGATACTGATGTGGTTCCCTGGAACCAGGACTCTTGAGATATTTGTGTAATTTATTTAATTTAAATGCCATTCTCCTTTTGTTCATTTTGCTAATAAAGTGGTTTTGAAATGTGAACGAATGCATGTGTTCAGGTGGTTTTACAGAGAGACAAACAAGTCACCTCCAGGAAGAGGTGGCCTTTCTTTGCCCAGTCCCTGGGGGGAAAGAAACAGAAAGCTAAGACTTCTCCTTGAGTCTCCCAGCTCCTCTCTGGGGTCTGGTTTTCCACTCCTGGGAATGAATAAACTCCCATGATACAGCTGAAGAACAGAGACAGGGTAAAACACCTGGTCCAAGGGATCCTCCAACTCAAGACCCGTTCCCAGAGCCAACTTTGTGATTTCTGTGGCTATCAGGGAAGTCGAACTTCCACTGTTTCATGTGCTAGTACTTCAGCTTTCATGAGAAGTCTCTCCAACGG EMBV3_38607 AGCATGAGGATGCTGAGTTGGGAACGTGTTGGCTGGTTGAGAGCACAAACTCTTTAGCCC Gene GeneID:528446|RASL11B:NM_001015635:104_cdna Constitutive 0 NULL GeneID:528446 6 GENE RASL11B NULL RAS-like, family 11, member B EMBV3_15098 TGCAGGTCTGATTATCCCTTATTAGAAGAACCACAGGAGTAATATGCCCAGCCATCACTG Gene GeneID:510865|TUBGCP4:NM_001077902:208_cdna Constitutive 0 NULL GeneID:510865 21 GENE TUBGCP4 MGC152214 tubulin, gamma complex associated protein 4 EMBV3_09919 ACTCCCAACGTGTCTGTTGTGGATCTGACCTGCCACCTGGAGAAACCTGCCAAGTATGAT Gene GeneID:616200|LOC616200:XM_002684914:2_cdna Constitutive 0 NULL GeneID:616200 1 GENE LOC616200 NULL similar to glyceraldehyde-3-phosphate dehydrogenase EMBV3_35300 GACAGACCCATGGATAGATTGTCCACACAGATTTGCTCGAAGTTCAGACCTACCAAACAG Gene GeneID:281637|ARRB1:NM_174243:7_cdna Constitutive 0 NULL GeneID:281637 15 GENE ARRB1 NULL arrestin, beta 1 EMBV3_17135 GTATTACACAGGCGTGGCCAAACGTAGCCACTGCTCAAAGTGTGGAGAAATCTTCCTGGC Gene BVT0102_269077 + 0 NULL GK000005.2:48200959-48560767 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194904 1 XLOC_117874 NonCoding TCONS_00194904 XLOC_117874 NonCoding NonCoding - 5:48396876-48406833 - TSS145338 755 2 TCONS_00194904_2 50 0.398675496688742 2 0.924367215749297 0 0 0 0 0 0 0 0 0 5.44966251018174e-06 3.33523857185521e-05 1.42080199523118e-05 1.90018666503292e-05 0.000242987832673366 0 0 0 0 0 0 0 0 0 0 0 0 7.76046577264235e-06 0 0 0 XR_237612.1 LOC101907123 PREDICTED: Bos taurus uncharacterized LOC101907123 (LOC101907123), 9e-19 98.7 73.10 0.256953642384106 NR_003676.2 LOC653786 Homo sapiens otoancorin pseudogene (LOC653786), non-coding RNA. 6e-47 192 80.28 0.280794701986755 0 noncoding 0 0 0 0 -0.0876035989563241 0.591062515726643 -0.0335953971597002 0.610787566792231 GTGAGTGGAGAGACAAGCTTCTGGAAGAATTTGTGCCCTGCATCCTTACATCATTAACCACCATGGAAACAGAACGCAGGGCTAGAGAGGAACCTCAAGTCCTGGATGTAAACCCCTCACCGCGCAGGTCAAGCAATGGGGCTCTGAGGTGCTGATTTGCCGAGCATCTCCTTTCTTCTGTATTACACAGGCGTGGCCAAACGTAGCCACTGCTCAAAGTGTGGAGAAATCTTCCTGGCTCCCATTAAACAGAGGGAGCAACACTCAGAGATTCAGCAATGAAGCCTCCATTATCTGGACTGCTCAGAACTCTCACCATGATTTCTCATTCCTTACCTATAAAGATTATACTGACAATCAGGAAGTTTTCTGGGTCTATCTCCTCTGCTACGAAGTATAGGTGGTATCAATGTAACGTTTCCTAACAATGTTGTAGGAAGAAATCATTATTTAAAATAATTATAAAAATATGCTCAATACCAATTGTTATTAGGGAATGGCAAATTAAAACAACAAAATACCAGGTACTCCCATTCACTTCTGGTGGAAATACAAAATGGTACCACCACTTTGGAAGACAGTTTGATGGTTTCTTACAAAATTAAACATATCCTTACCATATCATCCAGGCATTCTACTCCCTGGTATTTATTTAAAGGAGTGGAAAATTTACATGCACACAAAAACCTGTTCATGGATGTTCATAGCAGCTTTATCCATAATTGTCAAAACTTGTAACCAATCAAGATGTCCCT TCONS_00194906 TCONS_00194907 TCONS_00194908 TCONS_00194909 TCONS_00194910 TCONS_00194911 s 3' 163285 TCONS_00194906 TCONS_00194907 TCONS_00194908 TCONS_00194909 TCONS_00194910 TCONS_00194911 s 3' 153935 EMBV3_21484 TCACTCGACGATCCGTGCCTCTCTAGTGAAGAGCCTGAAGTGGATGTGAGGAAGAGAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04881 AGAAGCTGGCGCCCTTCCTGAAGATGTACAAGCAGCGAGGCCTCAGCTAGCCTGACCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38605 GTCCGCGGCGATGTCGGCCACCCACCCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA Gene GeneID:100337402|LOC100337402:XR_083935:256_cdna Constitutive 0 NULL GeneID:100337402 18 PSEUDO LOC100337402 NULL hypothetical LOC100337402 EMBV3_20437 CCTGTTTCTAAAATGAAGAGATTGACACCAGGAAGTTTAGTCAACGCTTGAGCACGAGCC Gene BVV0102_285986 + 0 NULL GK000018.2:6552880-7001634 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26270 TGTGTTTTCCCGTTCACCTATAAGGGCATAAAGTTTTTCAGCTGCACATCCCGTGATTCC Gene GeneID:100299268|LOC100299268:XM_002695076:491_cdna Constitutive 0 NULL GeneID:100299268 18 GENE LOC100299268 NULL similar to epididymal sperm binding protein 1 EMBV3_21781 CCGTTCAGGCTGTTGGTGTGATGTCATTTGGAGACTTGTTTGAAAATTATTGCAGAAATG Variant GeneID:523418|SLC38A11:NM_001031760:97_cdna 823^984 1 EMBV3_41130 GeneID:523418 2 GENE SLC38A11 FLJ39822 solute carrier family 38, member 11 EMBV3_08599 AGGGAGCTAAGAGCCTGGAAGAAGACTGGAGAAGCCGCAGGAACTGCAGACACGTTTATT Gene GeneID:617161|IMMP1L:NM_001079627:65_cdna Constitutive 2 NULL GeneID:617161 15 GENE IMMP1L NULL IMP1 inner mitochondrial membrane peptidase-like EMBV3_22819 CAGGACAAACACCGTCCTGAGCCTAACTTGAGAACACGCGCTGCAAAAATGTGCATCTAT Gene GeneID:534330|PIF1:XM_002690838:162_cdna Constitutive 0 NULL GeneID:534330 10 GENE PIF1 NULL PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) EMBV3_04734 CTTCGAGCACGACACACACCTGCACACGTGCGTCCAGGGCAGAACTAAGCCGCACTACTT Gene GeneID:518385|GPR123:XM_002698592:2_cdna Constitutive 0 NULL GeneID:518385 26 GENE GPR123 NULL G protein-coupled receptor 123 EMBV3_27024 GGATGGAGCGAATGAATCCAAGGAACTGATCATCCAAGAGCTGGTGGCCCTTCTCCAAGA Gene GeneID:618875|LOC618875:XM_002697215:123_cdna Constitutive 0 NULL GeneID:618875 23 GENE LOC618875 NULL similar to Uncharacterized protein C6orf222 EMBV3_25333 TTTTATAGCTGAACGTTTTCAGGAAGCTAGGGATGGCACATCACAGGTAAAGCTGAAAGC Gene GeneID:510059|TFAM:NM_001034016:11_cdna Constitutive 0 NULL GeneID:510059 28 GENE TFAM NULL transcription factor A, mitochondrial EMBV3_40193 CCGTGGTAGTGGGGGGACGGGCAACTTTAAATCCATGTCGACTTCCACCGAAATCATGAA Gene GeneID:528549|LOC528549:NM_001075916:29_cdna Constitutive 0 NULL GeneID:528549 3 GENE LOC528549 NULL similar to DnaJ (Hsp40) homolog, subfamily B, member 3 EMBV3_35149 AAGCCTTCTCCACCTGTGGCTCTCACCTGGTAGTTGTTTGCTTATTTTATGGAACAGGTC Gene GeneID:514883|LOC514883:XM_002688804:217_cdna Constitutive 0 NULL GeneID:514883 7 GENE LOC514883 NULL similar to Olfactory receptor 18 (Olfactory receptor 145-1) (Olfactory receptor TPCR34) EMBV3_08478 TCCACACTGTAAGGACCAAACTATACCCTTTCCTGGGTGAGTGAGCGTGTCTACCTCCGT Gene GeneID:100301173|LOC100301173:XM_002694663:201_cdna Constitutive 0 NULL GeneID:100301173 17 GENE LOC100301173 NULL similar to cat eye syndrome chromosome region, candidate 6 EMBV3_35797 TTCTGTGCCAGAGCAGAAGGAAGAGTTGAGGAGGAAGAAAGGGCAGACAGGGGAATAGGT Gene BVT0102_122559 + 0 NULL GK000003.2:23871146-24105658 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14749 GATGGCCAGCTTCCCTCTGAACCTTATTAGAACTCGTATGCAGGCTCAAGCACTGGAAGA Gene GeneID:615258|LOC615258:XM_002686195:423_cdna Constitutive 0 NULL GeneID:615258 3 GENE LOC615258 NULL similar to mCG4550 EMBV3_05707 GTCTACATGAGGCCCTGTGTCACCCTCCCTGCAGACAAAATAGTCGCTGTGTTTTACACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39677 TGACGATCCTAGCAGCAGGCACATCAATTCCTGACCTCATCACCAGTGTGATTGTCGCTC Gene GeneID:282474|SLC24A1:NM_174655:44_cdna Constitutive 0 NULL GeneID:282474 10 GENE SLC24A1 NULL solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 EMBV3_32691 CGTGTGGCCAGATGGCTCGGATGGAACTGACATCAACTCCCTGTGCCGCTCCCACAACGA Gene GeneID:504884|EML3:NM_001101846:43_cdna Constitutive 0 NULL GeneID:504884 29 GENE EML3 MGC159751 echinoderm microtubule associated protein like 3 EMBV3_11334 CAGAGGGTGGATTACCTGATTACCCTGCCTTGTTTAAGACCCCTCTCAGATGTATTCCAT Gene GeneID:507640|DDX31:NM_001101886:46_cdna Constitutive 0 NULL GeneID:507640 11 GENE DDX31 MGC155037 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 EMBV3_24548 CGACGAGATTTGTCTGCATCCAGCGTACACAGAAGGGTTTCCAGTAAAGTGTTCCAAGTG Gene BVV0102_359928 + 0 NULL GK000022.2:10923961-10946190 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126009 TCONS_00125999 TCONS_00126022 TCONS_00126000 TCONS_00126006 TCONS_00126012 TCONS_00126011 TCONS_00126001 TCONS_00126023 1 XLOC_077351 Coding TCONS_00126023 XLOC_077351 Coding Coding GOLGA4 22:10829927-10939705 j TSS94634 8691 1 TCONS_00126023_4 2190 0.107467495109884 25 0.921058145148802 0.000778975895428241 0.000534262963178145 0.000449710077568961 0.00123973785308073 0.000515085337376517 0.000173463471429812 0.000792525607573787 0.000300815733567659 0.000640401201533581 1.5841786615021e-232 1.59362408852031e-16 4.20120504029684e-06 2.90435905824237e-54 0.000128452335098606 0.000124205508404029 0.00397683811719532 0.00122929374810318 0.012516504688058 0.000496892937911934 0.000298345734197798 0.00012070344909442 0.00202663209213602 0.0013672932858883 0.00140518301137628 0.000577182543611359 8.05945775377676e-06 4.88863901105428e-09 0.000183462053266853 0.000277505238758736 0.000646694349519371 XM_005222514.1 GOLGA4 PREDICTED: Bos taurus golgin A4 (GOLGA4), transcript variant X1, 0.0 1.184e+04 99.98 0.755609250949258 XM_005265073.1 GOLGA4 PREDICTED: Homo sapiens golgin A4 (GOLGA4), transcript variant X5, 0.0 8082 87.29 0.755379127833391 TCONS_00126023_4 sp|Q13439|GOGA4_HUMAN GOGA4_HUMAN Golgin subfamily A member 4; 0.0 3249 83.40 0.958904109589041 1 coding 1 0 0 0 -0.123399389415434 0.598970367179956 0.015598311073652 0.834155843119015 GAGTAGAATGCGTCTTTCCAAGCCACAAAATCTCCCGACAGTGTTAATGGAAGTGAACCCACAACTCCTCAGTCAAGTGACACGCAGTCTTTTGCACAGAAGCTCCAACTCCGGGTGCCGTCTGTGGAGTCTTTGTTTCGGAGTCCAGTAAAGGAATCTCTAGTCCGATCTTCCTCTAAAGAATCTTTGGTACGCACGTCTTCTAGAGAATCCCTGAATCGGTTCGACCTGGACTCTTCTGCTGCCTTCTTTGATCCACCCTCTGATATGGAGAGTGAGACTGAAGACTCACTTGGGAATTTAGACAGTCTCAGCAAAGAGCAGTTGATCCAGTGGTTGCGGAGGACGGAACGAAGGTTGAATGGCTACAAAGGGAAATGTTGTGAGCTTGTTACAGCTTATCAGACTCTTCATAGAGAGAAGAAAAAGCTACAAGGTATATTAAGTCAGAGTCAGGATAAAGCACTTCGGAGGATTGGAGAGTTAAGAGAGGAGCTTCAAATGGACCAACAAGCAAAAAAACATCTTCAGGAGGAGTTTGATGCATCTTTAGAGGAAAAAGATCAGTATATCAGTGTTCTCCAGACTCAGGTTTCTTTGCTGAAGCAACGGTTACGAAATGGCCCAGTGAATGCTGATCTACCAAAACCACTGCCTCAAATGGAACCAGAGGCTGAAGGCGTCACTAAAGAGAACACAGACAGTGATGTAGAGCCAGTAGTGGGAGATGGAGCTTCTGCTAAAGCAGTGGAAGCACTTCAGCAGAGAGTTAAGCGTCAGGAGAACCTGCTGCAGCGCTGCAAGGAGACCATTCGGTCACATAAGGAACAGTGTGCGCAGTTAACTAGTGAGAAAGAAGCCCTGCAGGAGCAACTGGATGAAAGACTTCAAGAACTAGAAAAGATGAAGGAGCTTCATATGGCTGAGAAGACTAAACTTATCACTCAGTTGCGTGATGCAAAGAACTTAATTGAACAGCTTGAACAAGATAAGGGAATGGTAATAGCAGAGACAAAACGTCAGATGCATGAAACCCTGGAAATGAAAGAAGAAGAAATCGCCCAACTTCGCAGTCGCATCAAACAGATGACTACCCAGGGAGAGGAGTTACGGGAACAGAAAGAAAAGTCTGAAAGAGCTGCTTTTGAGGAACTTGAGAAAGCCCTGAGTACAGCCCAAAAAACAGAAGAAGCACGGAGAAAAATGAAAGCAGAAATGGATGAGCAAATAAAAGCCATTGAAAAAGCAAGTGAGGAGGAACGTGTCAGACTTCAACAGGAATTAAGTTGCGTGAAGCAGGAGGTTGTTGATGTCACGAAAAAATCCTCAGAACAAATTGCTAAATTACAGAAGCTTCATGAAAAGGAGTTGGCTAGCAAAGAGCAGGAACTGACGAAGAAGCTTCAGACCCAAGAAACAGAATTTCAGGAGCAAATGAGAATAGCTCTTGAAAAAAGTCAGTCAGAGTATTTGAAGATCACTCAAGAAAAAGATCAGCAAGAATCGTTGGCCTTGGAAGAGTTAGAGTTGCAGAAGAAAGCAATCCTCACAGAGAGTGAAAATAAACTTCGGGACCTTAAACAAGAAGCAGAGACATACAGAACTAGAATTCTCGAATTAGAAAGTTCTTTGGAAAAAAGCTTGCAAGAAAATAAAAATCAATCAGAAGATTTAACTAGTCATTTGGAAGCTGAAAAAAATAAGCACAATAAAGAAATTACTATCATGGTTGAAAAACACAAGACAGAATTGGAAAGTCTGCAGCATCAGCAAGATAACATTTGGACTGAAAAGCTCCAAGTCTTAAAGCAGCAGCATCAGACTGAAATGGAAGAACTTAGAGAAAAGTACGAGCAAGAGAAAGAAACATTGGTGAAAGACAGAGAGACACTCTTTCAGGCCCACATAGAAGAAATGAATGAAAAGACTTTAGAAAAGCTTGATGTGAAGCAAACAGAATTGGAATCATTATCGTCTGAACTGTCGGAAGTATTAAAAACGCGTGACAAGCTAGAAGAAGAACTTTCTGTACTAAAGGATCAAGCTGATCGAGTGAAGCAGGAATTAGAGGCCAAGCTGGATGAACAGAAAAATCATCACCAACAACAGGTTGACAATATCATTAAAGAACAAGAGATTTCTATCCAGAGAACTGAAAAGGCCTTAAAAGATGAAATTAACCAACTTGGGCTTCTTCTGAAGGAAAAGGACAGGCATTTAAAAGAACATCAGGCCCGTGTGGAAAGTTTAGAGGCAGACATCAAAAGGTCTGAAGGGGAACTCCAGCAGGCATCGACTAAGCTGGAGCTTTTCCAGTCACTGCAGAACACAACGCATGAGCAGGCTAAAGTCCATGAGGAGCAGCTGGCCCAGTTGCAGCAGCAGTTGTTGGATTTGGAAACAGAAAGAATTCTTCTTACTAAACAGGTAGCTGAAGTTGAAGCTCAAAAGAAGGATGTTTGTGCTGAGTTAGACGCTCACAAAATCCAGGTGCAGGATCTACTGCAGAAGCTTGAAAAACAGAATCGTGAAATGGAAGAAAAAGTGAAATCTTTAACCCAGCTCTCTGAATCCCAACTTAAAGATAACAACACAGAGCAGGAACAGAGAAAGCAACTCTTAATGGAAAAGGAAAATGTTATTTTACAAATGAGAGAAGCCCAGAGCAAAGAAACAGAAATACTCAAACAGAAATTATCAGCCAAGGAGGACAGTATTCGTGTTTTGCAAGAGGAATATGAAGCCAAATTTAAAAATCAAGAGAAAAAGATGGAAAAAATTAAGCAGAAAGCAAAGGAGATGCAAGAAATATTAAAGAAGAAATTGTTGGATCAGGAAGCCAAACTTAAAAAAGAGCTTGAAAATACTGCTCTGGAGCTCAGTCAGAAAGAAAAACAGTTCAATGCCAAAATTTTGGAAATGGCACAGGCTAACTCAGCTGGAATCAATGATGCAGTATCAAGACTGGAGACAAACCAAAAGGAGCAAATAGAAAGTCTCACTGAGGCACACAGGCGAGAGCTCGATGATTTCATAGCAGTCTGGGAACGGAAACTTAGTCAGCAAGCTGAAGAACTTCAGGAAAAACATGATATCCAGTTACAGGAGAAAGAACAAGAGGTAGCAGAACTGAAGCAAAAGATGCTCCTGTTTGGGTGTGAAAAAGAAGAGATGAACAAGGAAATGGCATGGCTGAAGGAAGAGGGTGCTAGGCAGGATACCGCGTTAAAGGAATTACAGGGACAGTTGAAGCAGAATGCTGCTCTCATGGATTCTCTCACACAGAATGAGGCTAAACTAAAAGCTGAACTTGAAAAGCTGGAGGTTGACTTGAATGGCTCTCTGAAGGAAAACATTTTTCTTCAAGAGCAAGTAGCTGAACTGAAGGTGCTGGCAGAAAAAGACAGGCTCAAGGTTTTGGAGTTTACTGAGAAGCTGAAAACCACAGATGAAGAATTCCAGAGTCTGAAATCTTCACACGACAGCAGTAAGAAAAGCCTAGAGGACAAAAGCCTGGAATTCAAAAAACTGTCCGAGGAGCTAGCAGTTCAGCTAGACATTTACTCTAAGAAAACCGAAGCCTTACTACAGGCTAAAACAAGTGAGCTCATCGACATCAGCAGTAGTAAAATCAGTGCCATTCTCTCTAGAATCTCCCATTGTCAACAGCACACAGCTAAAGTGAAGGAGGCACTACTAAGCAAAACTTGCCAGGTTTCTGAATTAGAAGCACAACTTAGACAGCTAACAGAAGAGCAGAATATACTAAATAGTTCTTTTCAACATGCTGCACATCAGTTGGAAGAAAAAGAAAGTCAGATTCAGAGCATGAAGGCTGATATCGAAGGTCTTGTTACAGAAAAGGAAGCCTTACAGAAGGAAGGAGGAAATCAGCAACAGGCAGCTTCAGAAAAGGAATCTTGTATCACACAGTTGAAGAAAGAGTTGTCAGAAAACATCAATGCTGTCACCATGATGAAAGAAGAGCTTAAAGAAAAAAAAGCTGAGATCAGCAGTCTTAGTAAACAGCTAGCTGATTTGAATGCTCAGCTTCAGAATAGCATCAGCCTAGCTGAAAAAGAAGCAGCCATCTCATCACTAAGTAAGCGACATGATGAAGCACAGCAGGAATTGCTGGATCAAGTGCGAGATTTATCTTTGAAAGTTGAAACTCTGAGTAAAGAGAAAACGTCTGCTCTGGAACAGGCAGATCACTTGTCCATTAAATTCTCAGAGTGGAAGAAGAAAGCACAATCAAGATTTACACAGTACCAAAATACTAGTAAAGAATTGCAGGTGCAGCTTGAGTTAAAAACAAAGGAAACCAGTGAAAAGGAAGAGCAGTTAACTTTATTGAAGGAGGACCTTGATCAGCAAAAGAAAAGATTTGAATATTTAAAGAGTGAGATGGAAGATAAGAAGAGTGAGATGGAGAAAAGGGATTTTAATTTAGAGACTGAGTTAAAAACTCAAACAGTGAGAATTGTGGAATTAGAGGAGCATGTTGCTCAGAAAACAATTGAAATTGAGTCCTTAAATGAAGTTCTTAAAAATTACCATCAACAAAAGGATAGTGAACAGAAAGAAATGATTCAGAAACTCCAACACATCCAAGAGTTAGGAGAAGAGAAGGACAACAGGGTTAAAGAGGCTGAAGAAAAAGTCTTAAGACTTGAAGAGCAAGCATCTTCCATGAAATCTGAACTTGAATCTGTGAAGAAAGAATTGGAACATGTGAATTCAATTGTGAAAGGCAAAGAAGAAGAGTTAAAAGCATTGGAAGATAGACTTGAATTAGAAGGTGCTGCGAAATTAGCAGAATTGAAGAAAAAAGCTGAACAAAAGATTGCTGCCATCAAGAAGCAGTTGTTATCACAAATGGAAGAGAAAGAACAGCAATACAGAAAAGACAAAGAAAGCCATCTGAGTGAGCTAACTACAAAACTGCAGGAAAGAGACAGAGAAATTCACATCTTGGAAGAAAAACTGAAGTCCGCGGAAAGTTCACCACAATCTGAAACGTCAGTTGTACCCAGATTGTCAGAAAATGTGGCAGTGTGTACTGAGCAAGAAGAAGCAGATTCCCAAGGCTGTGTGCATAATGCATGTGAAGAAAAACTTGGTGTCTTACAAAGAAATTTAATTGAAAAGGAAATGCTAGTGCAGAGGCTGGAGCAGGAAAAAGAAGAAATAATTTCCTCTCATTCTGAAATACAGTGCAGATACCAGGAGCTCTTAATAAAGATAGAACAGGCCGAAGCAAAACAACATGAGGATCGAGTGATGATAAATCAGCTTCAAGAAGAACTTGAAGGAAAAAACAAGAAACACTCCTTGGTTTCTTCCCAGCATTTGGAAGCAGAAGGAGACAAAAATAACGCAGGGGCAAAGCAGAACTTGGAAAATGTGGTTGACAATGTCCAGAAAACGCTACAGGGGGAGGACTTGACCTGTCAGATCTTGGAGCAAAAAATGAAAGAGCTGGATTCCTGCTTATTGAAAGAGAGGGAAGGACACAGAATTGAAATCGAAGAGCTGACCTCAAAACTTGAAAGTTTACAGGCTCTACAACAGATGAATGGAAAAAGTAAACCCACAGAAGTTTTGGAAGAAGGTGCTGAAGGAAAGTCCACATCACACGTGGTTCAGCCCAGCTCGCTTAGTAACATGGAGGCCGATCACAATGACCTGGAGTTTAAATTAGCAGGGGCGGAGCAGGAGAAGCGGAAGCTGAGCCAGGAGGTGGTTAAACTGCAGAAAGATATTCGAATGCTACGGAAGGAGCATCAGCAAGAACTGGATATAATAAAGAAAGAGTATGAAAAAGAAATGGAAGAGAAAATCAAACAGGAGCAGGAAGATCTTGAGTTGAAGCACAATTCCACATTAAAACAGCTGATGAGAGAGTTTCATACACAGCTGGCACAAAAGGAACAGGAACTGGAAATGACCATAAAGGAGACCATCGATAAAGCCCAGGAAGTGGAGGCTGAACTTTTAGAAAGCCATCAAGAAGAGACAAATCAGTTATATAAAAAAATTGCAGAGAAAGAAGATGATCTAAAGAGAACGGCGAAAAGATATGAAGAAATCCTTGATGCTCGTGAAGAAGAAATGACTGCAAAAGTAACGGATTTGCAGACTCAATTTGAGGACCTGCAGAAGAAATACCAGCAAAGGCTAGAGCAGGAGGAGACTCCCGGCAGCGATAAAGTAACAATTATGGAGTTACAGACACAACTAGCACAGAAGACTACTCTAATCAGTGACTCAAAGTTGAAAGAGCAGGAGTTCAGAGAACAGATTCACAATTTAGAAGATCGTTTGAAGAAATATGAGAAGAATGTATACGCAACAACTGTAGGGACACCTTACAGAGGTGGCAATTTGTACCATACTGATGTCTCACTCTTTGGAGAACCTACGGAGTTTGAGTATTTGCGCAAAGTGCTTTTTGAGTATATGATGGGTCGTGAGACTAAGACCATGGCAAAGGTTATAACCACTGTACTGAAGTTCCCTGATGATCAGACCCAGAAAATTTTGGAACGAGAAGATGCTCGACTCATGGATGGTCATTTTGATTCAGTACTCCATGATGATCGGCCTGTCCATATTGTAAGCACACTGGAAAGAACAGTCCAGGACCAACCCGTCTTTCTCTCAACAACCTTTGATTGCCAAACACGGACACACTTCAGAAGACCGTGTGCCAGGTTTCCAAGAAAAGTTAACTCAAGATCTGGGGTGGCTCACGAGATCCTGGATATAATGTTTGATGCTACAATTGGTTTCACCCCCAAAGGAGAGAGGCTGAGGGAGGGGGCTGATCAGCCGTAGACTTCTGACCACGCGCTTCAGCCCCGGGTCTTCCTTGCAAGACTACAGCTGAGGAACAACACAGAGACCACGTGGTGTGGTTGTAACTCCTCTGACATCTCGTTTTCATTCTTCGACGAGATTTGTCTGCATCCAGCGTACACAGAAGGGTTTCCAGTAAAGTGTTCCAAGTGCCTTTTTTCAGAAACCCAAATCCACATGAAAACAATGGCAACAAGAAAAGGTGTAAACTTTCCAGGACAGGCCCAGATTTTGAAAATGTGATAAAGAGGTTATTGTGCGTCCGAACTTTTCACACAAGAATTGGAGGAGATTTAACACCAGGAATAACAAACATAGGAAAAGCAGCTAATGCAGAGCAGATGGGCCTGCAGGGCAGTCAGTGCTAAGCACTTCCATGTCTCTCCTCTTGGACCTTTGGACTCCAGATGACTGAATGCTAGTTTCTCTAATTCCAAATAAAGTCAGTGCATTTGGGGAAACTATCAATATGATGGGTTTAATTTCTGGGATGATTAATGGATTAAAGTGTTTTTGGGGGAGTAGGGTGTTTCCCTGGTGGCTCAGATGGTAAAGAATCTGCCTGCAGTGCAGGAGACGTGGGTTCAGTCTCTGGGTTGGGAAAGGTTTTTACGACCGTATATGTGGTGGGTGTTTGACACTTGCTACTTTAGTCCTGACCCCAGCTCCATTTTGCAGATGAGAAAATTGAGGTTTTAAAAGTGCAAATCACTTTACTGAAGGGCACACAGCTAGTGTGAGAGCTGAGCTAGGATGGGTCCTAGGTCGGTCTCATTGCATATGCTGTGGTTCTGCAAGCTGGGTAATAGGTGAGGAGGCAGAAGGAGTCATGGGCACATAAATCTGAGAAACACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATACAGTGATTACATTTGTGGTCAAGTCTTTGTATGACATAAGCTTTATTTTCTCTTGGATACATACCTCCGAGTGGAAGGGCTAGGTCATAGGGTAGGTATAGGTTTAATTCTAAAGAAACTGTTGAACTGTTTCTCAGGTTGGTTGCACCGTTTTGCGTTTCCAGCAGCAGTATATGAGAGTTCTGGTTCTTCCTCGTCAGCACTTGGTATACTCAGTCTTTGAAATGTTTGCCATCTTAATAGGCATGTCATGATAACAGATTTTCTTACGGTTTTAATTTGCCTTTCCTTAATGACTAATAATATTGAATGTGTTTTCATGTGCTTGTTTACAGTCTGTATATCTTTTTTAGTTAAGTCTTCAAATGATTTGCATATTTTTGAGTTGTTTCGTATCATTGAGTTTTGAGAGTTCTTTAATACTTATTGATACAAGTCTTTTACTAGTTATCTGCTTTGCAGAGATTTTCTTCAAGTCTGGGCTTGTATTTTCATTCTCCTAATAATGTCTTTTGAAGAACAGAAGTTTTTAACTCTGGTGAAGTTCAATTTTATTTATTTATTTTAAAATTTATTATATTGAAGTTGATATACAATGTTGTGTTAATTTCTGCTCTACATACAAAAAAGTGACTGAGTTATGCATTCTTTTTCATATACTTTGCCATTGTGGTTTATTACGGGATACTGGATGTAGTTCCCTGTGCTCTACAGTAGGACCTTGTTTATCCATTAAAGTCCAATTTATATTCTACATTTCTTAACTTCTGTTTCATATTTTAAAACCTTAGGTACCTTCTAGAGGAATTCTTGGTTTGATTTTACAACTCGCAGATTTACTCTTTGGCAACCTATTCTACTATTCAGCCTGTATGTTGAATTTTTTTTCAATGATCAAATATTTAAAATAAAAATCAAATCA EMBV3_12512 ATTTCATTGATCCCCCTGCGAGGCAGTGAGAATGAGATGCGCCGGAGTGTGGCCGCCTTT Gene GeneID:511889|ARAP1:XM_002693437:76_cdna Constitutive 0 NULL GeneID:511889 15 GENE ARAP1 NULL ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 EMBV3_21851 GCAGGGAAGTCCCATGCTCACGGAGTCTTTATGTTCATATTGGAATCAGAAGACGATTGC Gene BVV0102_026507 - 0 NULL GK000022.2:59244358-59455347 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24332 TTGGTCTCACACGGCTGTAAGTAGTCACGGACTCCTCATGCGTGTCCTGATGTCATCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15763 TGGAAGAGCAAGTAATGTTAACTGAAAAAGCTCTGATCTATCCAGCGAAGAGGGATGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22030 GATAGAAGCAGAAGCTTAGAGAGTTGCAAAAAGGGGTCCTTCAGTTACAGTGACGATGCG Gene BVV0102_120151 + 0 NULL GK000018.2:7006491-7356787 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19204 GGGCAACTGACCAAATCCAAAAGGTCAGCCCAGCTTGGAAGTAGAACTTTCCCATTCCAG Gene BVT0102_116442 + 0 NULL GK000004.2:19728236-19893088 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17048 ACCTGGCAGGAATACTGGGGCTCACTTCAGCTCCTCAGGCAATGCTGGATAACCCAGTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31251 CCCAGTCAAGAGAGCAAGATATCAACAAGCAGATAAATGACAAAGTGCGTGTGGGGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09809 ACAGCGATAAAAAACCAGAAGAAGGACCTGGAAAGGACCTGGACCCAGCAGAGGACAGCC Gene GeneID:786285|LOC786285:XM_002699810:12_cdna Constitutive 0 NULL GeneID:786285 X GENE LOC786285 NULL similar to nucleosome assembly protein 1-like 1 EMBV3_42186 TCAGGCCAACCTGACTCTGTCAAATACAGTCTTATCTACAATGCTGGGAGCTGCTCGGTG Gene BVV0102_185525 + 0 NULL GK000018.2:16169644-16296174 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088693 1 XLOC_053479 Coding TCONS_00088693 XLOC_053479 Coding Coding - 18:16253891-16262851 - TSS66039 8960 3 TCONS_00088693_16 322 0.833816964285714 1 0 1.16138100847541e-05 7.96429858026615e-06 3.07256028026004e-06 4.42709753766115e-06 5.69941641360114e-06 9.36986144176691e-06 4.17213544200926e-06 7.63046551528769e-06 8.58928521701181e-06 0.00301046678642136 0.00239831088605626 0.0015763669782467 0.000227177578259478 0.00108690726800688 0.000384144385590756 0.000790121063971953 0.000515956829006995 0.000826027671964117 4.3811848144521e-06 3.31201459449274e-06 1.09063433137715e-06 0.000992635426179298 0.00198119839159111 0.00142769773920594 7.68687460946034e-06 8.69637334773621e-07 3.2494649242946e-06 0.00389999415994786 0.00174588384334866 0.00262377460897209 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2360 89.00 0.197767857142857 TCONS_00088693_12 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 4e-25 107 34.00 0.878228782287823 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 TTAAGTAGGCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATACAAAAGGAGGAGCCAAAGCGTTTTCTCTCGGACTCTCTCTCCCGCGTGCGTGCGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACATGGTTTGTCCAAGACCCGAGAGCTGTGATGTGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAAACAAAGAACCGAGGAACATACACTCGCGTGACATCTATGGTGCCGTGACTCGGATATAACCTGGCTGAAACAACCTCTGCATGGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGTGAAGCTCCCGCGCTAGAAGCGAAAGGTGAAGAAACTCAGTGCAGGGGAAGGCCCATCGTGCTGGAAACCGGGACAACGAAAACCGAACTCAGCACAAAGCTCACGCGGCCCAGTCTCAGATTCCAGAAGACCTCCAGTTAAGGTAAGAGGTCCTCGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCTTTCTTGTTTCCTCAAACCTCCCGCGAACAGGCGGGCAGCAGGGGCACAACTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACCCAAGCTGGTGGGGGTTCTTCTGTCCTTTCTCTTCTCTGTGCCAAAGATCAGACCAATGAAACTGTGAGCACCGGTCAGATATTTAGCAAATTTTCCGGCGGGCTATGAAGGGGATTCCTTGGCATGTTTTTCCCACTGCTTTTTCCTCTTGTCCTTCAGCTCTCTCCCGGGACTCAAGCCCAGCCAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAGATTTGTTAGGATCCAGAGAGAAGTCACCCTTCGGGGTATGAACCATTGCCGAGGGCAAGGGCTTCGGCCATGGTATTAGGCCTGGCTAGGTTTTGTGAGGGAATGGAATTCATATGCTAATGAGTGAGAGGATAATCCCAGCCATTGGGGAACCACCCATCCTCCCTCTTTTACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTGGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTCACTTGAAGTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACATTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCCCTTCCCTCCTGTTTTGTGCTCTTTTCCTAAGCCCCATCCAGACCCACAAGGTTGCCTCTACAATCTTCTGAAGAGACAATCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCTAATCCTACCCAATACTGGTCACATTGGAGATCTTGGGGACGCCCAAACTCCAGTCCCGGGGGTCCCAGGAGGTCATCACGCCTTGACTTGCCTAGGGATCGGTCTTCGAGAGGTTGTCACGCCTCAACCTGTTTGGGGATCCTCTAGTCCCAGGGGTCCCAGGAGGTCATCACGCCTCGACCTGCCCAGGGACCCAATCCTCAGGAGGCTGTCACACCTCAACCTGCCCGGGGATTCGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTGCACCCTGACCCAGGGACGCCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAGAAAGACTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAGCCTATTACTTGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCCATTGCCTTTCTGGAGAGGCTAAAAGAGGCGCTCCAAAAGTTTACCAACCTGGACTTAGACTCTTACGAGGGACGGGTGATTTTAAAGGACAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAGAAAGAAAGAGACAAGGCATGCCCAGATGCTGGCTGCCCTCCAGAGAAGCCCTATGGCAAACCCCGAGTCCTTGAGGGACAAGGCACGAGACAGATGCCTGATCTGTAGACAGGCGGGGTATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATCGGGCGACACTCTGCCCCCGGGACCCAAGAGCCTCAAGGTCAAGTGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGCAGCCCGCTCCAGCCAGCCCGCCTGTCACAGATAACCATCACGGGGCTGGAGCCAAGGGTGCAACTGGATGTGGCAGGTAGGTCTGAGAATTTCTTGATTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCAAAACCTGTACCATTTTGGGTGCTACACGAAAAGCAACTACTAAAAGATTCACCCGAGCACTTCTTTGTTGCTGGGATGGACAAATATTTTCCCACCAGTTTATGGTGGTCCCTGAGTGTCCTACCCCCTTATTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAACCCATTACACCTTCAATAGAGAGGGACCAAAAACTATGGGAAGACAAAATCAACCCCCAGGTGCTGGACGAGCCCACCGAGCTGAACCGGTCATCATTGTCCTCCGAGATCCCACTCGATTTCCTAATTGGAAACAATATCCTCTCAAAAGAGAGGCTCGGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGCTTGCGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCCCAGTAAAGAAAAAAGACGGAACCTGGCGAATGGTCCAAGATCTCCAGATCATAAATGAAAATGTAGTCCCCCTCCATCCCACAGTACCCAATCCCTATGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACCACTGACTAAAGAATCCCAATACCTTTTTGCCTTTGAGTGGGAGGCCCCAGGAGAAAAAAACCAACAGATGACTTGGACAGTATTACCTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGACAGGCCCTTAGCCGGGATCTCCTAGATCTGGACCTGGGACCTAATGAGAAAATATTACAATATGTAGATGATCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGATCGGGTACAAGAAATCCTCCAGTTGCCCTCCCCCACGACTTGAAAACAATTGTGAGCTTTCCTGGGACTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCGGCCCTTATATGAAAGCTTATAGGGACGAGATGATTCAATCCCACTGATGTGAGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTATGTCAATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCGATCCAACTTCCCGAGGTTGGCCCCCCTGCATTCGAAATATTGCAGCATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATGGGAGAGGCCATTTATGGATGTCTGATCAAAGAATCCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTCCCTACCCCTGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCCGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTAGATGGAAAAAGAAGAGCTGGGTATGCAGTAGTCTCCAATTTTGAGACCATAGAGGCTAAGCCTCTGCAACCAGGTACTTCAGCCCAATTAGCTGAGCTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAAAATAGCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGACCCCTTGACCACCCGAGGGTCCCCAATCAAATATGGTGGTCAGATTCTTCGACTCTTGGAGGCAGTCCATCTGCCCACTGAGGTTTCAGTCTCCCACTGTAAAGGACACCAAAAAGGGAACACAGAAGTGGCACGAGGGAACCAAGCATCTGATCAGGCAGCTAGGAGAGCAGCATTACAGAACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATTTGGGGTTAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGATAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCCTCCAAATACTACTAGAAAGGTCCTTCAGAGGAACAGGCCTCCAAACAACTATAAGACAGGTGGTCTCCTTTTGTCTCACTTGCCAATTAAACAACTCCCAAGGAGCTCAAAGACCCCAGCTGGCCCAGCCCATCCAACGATGTGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAGTACCTATTAGTTATGATAGATACATTCACAGGATGGATTGAAGGCTTTCCCACCCGGACTGAGAAGGCTGAGGAGGTGGTAAAAAAAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCCAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGCATTGGGCATTACTTATTATCTCCATTGTGCCTGGAGGTCTCAATCTTCAGGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCCGCACCTGCATTGCCCCTAAGGAACAGGTTGGTCTTAGTCCTTATGAGATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGACCATTGGGCAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGAACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCAAGAGTCAAGCCATGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGATACCTATTCAGAACTACCAATGAGTGCCATTCTAATGAACACCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGGATAACTCTAAGGAGCCAACAGAGCTTGACAGAGACTGTACTCCAAAACAGACAGGAGATAGATCTTCTGATCCCTAAACAAGGAGTGACTTGAGCTATCCTGGCGATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCGTGTTATGCTATATTGATGATGCTTATGATTATTCTATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTACAGCTGACCACGGAAAATATCACACAGCCTTGGACACCGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCACTGCCCCATTTCAGCAGGAAGTAGCCAGAAAGACCTCAACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGAATGTTAGGTAGTCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAAACATATAAAAGGAGGAGCCAAAGAGCTTTCTCTTGGACTCTATCTCCCACGTGCGTGTGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACACGGTTTGTCCAAGACCCGAGAGCTGTGATGCGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAGACAAAGAACTGAGGAACGTACACTCATGTGACAGAAAGCTAATTGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCTTAAAGGAAATCAGTCCTGAACATTCATTGGAAGGACTGATTTTGAAGCTGAAACTCTAATACTTTGGCCACCTGATGCGAAGAACTGACTCATTTGAAAAGACCCTGATACTGGGAAAGATTGAAGGCAGAAGGAGTAGGGAATGACGGAGGATGAGATGGTAGAATAGCATCACCAATTCAATGGACATGAGTTTGAGTAAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCGTGGGGTTGCAAAGAGTTGGACATGCCTGAGCAACTGAACTGAACACAGAAGCCACGTTTTTGGCCTCATGTTCTTCACCGTGAGTGTGCTTTCCAGTTCACTGCATCCCTCTCAGCCCTTCCTTTTCCACTTGACCTGCTTCACGCATTCATTCATCCTTTGTGGTCTTTTTGTGGCCTCTAACTCCTTGTTCATTTGTTTTAATATTTTGAGGGCTGTGGATCTTTTTGAGGATCAGTGGAAACTCTAAAATGACTCACATATCACACATAAGATAAAATGTTATATATGATTTCAGGATACTTAGAACTGCCCTGGATCCATCCAGGGATGAGCCCCCTTCTTGAGATGCACGGACCCCTTTACCTCAGTTATATTGAAGATATTTTGGCACACTGGAGTTGAAGGATTCTTTGCAATCTTCTGCTTCTCTGGAGTGGAGAAATCTCTGTCAGAGCTATCCACATGTAACTGTGCACGTATTTGTCATATACAAGGTCAAGTGCCCATATCCTCAAAACAAAGGGTTGTCCTAGCACACACAGAACATGATTAAGGGGAGTTGGCATGACTATCTGAGGGAGTATCCCTAAGGTCTTTGACAGTTTTCCACAGGAATCTGAAAAGAGATTGTCTTTGACCAGATTCTGGATAAAACCTAGACATAGGCATTGCTATTGAGCTGTTTCTTATCCTCATAGAAAAATGCATTTATTGAGAGAAAAGCCTCTTCCTGAGAGAAAAGGGGAAGAGGGTTCTTCCAAGAGGCTTAGAAGTGACTTTGCTCAGCAAATGGCTATTTATCCTCTCAAGTGATTGATAATATGCATTAAAAATCACCTTTGTGATTAGAGAAGAAGTTCTCTTAGTGGCTCCCTCCCAGGGGAAGGGTGGGGAGCTGGCTTTTATCAGAGCTCATCTTCCCAGGGAGGGTAGAGAATGAGGAACCCAAGAACAGTGAGCTTGGTCACCAAGAGAATTGAATTATAGTCCCATGAGATCATGCTGTCAGCTAGACTGCTTATCACATGTAAATCTGCTGCAAGCCTATGAGTTAGATTCTATTATTCCTGTTTTACATATACGGACACTGAGGCACAGAAAGGTAAGGTGATTTACCGCAGGTCACAAATCTTGGAGGCAATGGGTCAGGCCAACCTGACTCTGTCAAATACAGTCTTATCTACAATGCTGAGAGCTGCTCGGTGTGTGAGTGGGTGAGAGACTCAGGCTCCCCATATCAGCGTGAGTCATACTTGGTGGTGAAGGGAGGAGGAGGAGCGCAGGGCAAGATGCCAGCCAACTCCTGCAGCATCTCCTCCCTGAACGCAGCACCACAGAGCAGCAACTTCTCCTGTGAGAGGAGCCATAGAAGTTGCTTAAGGGAGCCCAAAGGGGATTCTATTCAGAATAGGAAGCAGACAGCCAACCTAAACTATCTCCCTGAAGGTGTGAAAACTCTTGGCTCTGACTTAATAACTAGTTACATTAACTTAGTACCTAAACTCTGCAAGGTCCCTTCTCTGGCATCATTTCATTTTCCTCTGAAATAACCTTGGAGCATTGCACATTTATTTCACCCACTTTTCTGCTTATACATTATCTTTCATAATAAAAAGGCAAAAGAATTCACATATACAACTCA TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 97374 TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 106333 EMBV3_10662 GACTTTCAACCAAGTGAAAGCTAGTGGTGCATTTGAGCAAGAAAATGCATAGTTGTGAGC Gene BVV0102_314417 + 0 NULL GK000006.2:69434442-69501919 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203471 TCONS_00203466 TCONS_00203478 TCONS_00203472 TCONS_00203467 TCONS_00203477 TCONS_00203476 TCONS_00203468 TCONS_00203479 TCONS_00203470 TCONS_00203473 TCONS_00203475 TCONS_00203480 TCONS_00203474 1 XLOC_124184 Coding TCONS_00203471 XLOC_124184 Coding Coding DCUN1D4 6:69366373-69437673 j TSS152403 4302 1 TCONS_00203471_1 292 11 0.939816827725494 0.00307609976244391 0.00546903394107288 0.00228602356146124 0.00236116647803376 0.00381028418149236 0.000304903905591325 0.00287141885976278 0.00221165042550336 0.00451534802248951 0.00122962661084896 9.55807244549349e-05 7.69572348349504e-05 0.00150761855204502 0.00241318301272662 0.000760563636446325 0.00107346162720478 4.82623826833696e-12 1.44242123189881e-06 0.00244331868283346 0.0024375248036536 0.00129993518230845 4.94316362777839e-13 5.57980011886475e-10 0.000615219147429836 0.00337351049945033 0.00361711756746787 0.00249084003796032 7.03403182397282e-08 9.62071264644153e-06 2.48945584173118e-05 XM_005207967.1 DCUN1D4 PREDICTED: Bos taurus DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) (DCUN1D4), transcript variant 0.0 7687 100.00 0.990469549046955 NM_001040402.1 DCUN1D4 Homo sapiens DCN1, defective in cullin neddylation 1, domain containing 4 (DCUN1D4), transcript variant 1, mRNA. 0.0 4562 83.67 0.99953509995351 TCONS_00203471_1 sp|Q92564|DCNL4_HUMAN DCNL4_HUMAN DCN1-like protein 4; 0.0 608 98.97 0.996575342465753 1 coding 0 0 0 1 -0.0128777914145813 0.942159824517493 -0.0234727443260067 0.718324606968607 GAGTGCCCGGCGGCGGGTCCTCAGCTCCCAGCCGAGGTGCGGCGAGCCGGTGGGGGGACCGCGAGGCGAGCGCGGGAGCTTGGGCGGCGAGAGCGGTGTGAGCTGCCCGAAAATGCACTCGGATGCCGCCGCTGTCAACTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAATATTCATAAGATCTACCACACCCTTAATAAGCTAAATCTAACAGAAGACGTTGGCCAAGACGATCACCAAACAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAGTAAAGTGATGCCGCCGAGGAAAAAGAGGAGACCTGCTTCTGGAGATGATCTATCTGCCAAGAAAAGTAGACACGATAGCATGTATAGAAAATATGATTCAACTAGAATAAAGACTGAAGAAGAAGCCTTTTCAAGTAAGAGGTGCTTAGAATGGTTCTATGAATATGCAGGTACTGATGATGTTGTAGGTCCTGAGGGCATGGAGAAATTCTGTGAAGACATTGGTGTCGAGCCAGAAAATGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAATATGGGTTATTTTACTCTACAGGAATGGTTAAAAGGAATGACTTCTCTACAATGTGATACAACAGAAAAACTCAGAAATACTTTGGATTACTTAAGATCATTATTAAATGATTCTACAAACTTTAAACTTATTTACAGATATGCATTTGACTTTGCACGGGAAAAGGACCAGCGAAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTACTAGGAAAAATCTGGCCCCTTTTTCCAGTTTTTCACCAATTCTTAGAGCAATCAAAATATAAAGTTATTAATAAAGACCAATGGTGCAATGTGCTAGAGTTTAGCAGAACAATTAACCTTGACCTCAGCAACTACGATGAAGATGGAGCATGGCCAGTTTTGTTGGACGAGTTTGTGGAGTGGTATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTATGTCAACCATTAGCCATAAATTGCTGTTTGTACCCAGCGCATGCTGCTTTTCTCGCACGGTCTCCCTTTGGCAGGGACGCGTCGGTGTTTGCTGTTGAATGGGCCAGCTCTGCTTGCTGTGTGGCACTGTTCTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAGCGTCCTCACTGTGATTATGTGTATATTGCTGTTTAAATTTTGTATATGTGTATAAAAAGACAAAGCTTCACCTAGAGATTATTTCTGCAAAAATGTATTGTAAAATAATTTTTGTGGCATATTTCTAGTCCCTTTTTTCAAATGACCCAATTACACTTTTCTTTGGTCTCAAAATGTAGCATTTCAGATATAAGACAGAACAGCTGTTATCATATGCAAATGTTGCCAGAATTAACCTTATTATTTAAGAGGCCAACTTTGGAAGGAGGTGGGAGTTGTAACTTTTCAGAGGTGTTATGCCAAATCTAATTTGGTTTCCTTAAATATTAGCATTTTGAAATGATGCAAGTTAGAATAATTGAACATATAGACCCATACCATGCCACACATCATTTCCACCGTGCAGTATATAGGTTTTGGTTTTCTAATGTTAAAGCTGTCATAGTTTGAATATAGGTACAGATGAACAAATTACAATTGCACCTTTTTTTCCCATTGGTTTTAAACCCTTGTACACTTTTTTAGTGCTTTTTTTTTCCTTTTGCATTCTTCTAGTCAGTGTTTGGTCTGCTGATGCTTTCTATGCCATTCTAAGTAAAATTTATTTTGCCGCCTCCATGAAAACCTAATGGTTTGCTGGCAATTTATAACTGCAGAGCACTTTTAGTTGTGGCTTGAATTTTTAGTTAAGCTTTCATGGTGTCTGATTTTCTAGTTTTGCGGGGGCGGGTGGGGGGAAGAACTATACTGTAAGTGAGAGGTGTTTTGTTTTGTTTTCCTTTTTTTGTTTCTTTCATGCTAGGCTTTTCCTGGCAGAATGTCCATTGCAGGCAGTGGACACGACACCACCAGCATTGAGCTAAAAACTCTATTACACGGTAGGACCTTTCCTGGAGGGGCCGCTCGTCATTACCTGAGTAATATGTACAGAGAGGTGATAGCCATTATTTATGTGGGTGAAGAAACAGGAGTAAATGGGATGGTATTTTTAGGTTTGTATTTTATGTTTTTTTTTTTTTTTTTCTTTTCTTGTCTTAGCCCTTCTCAAGGAAATGTACAAAAAAACATGCTTCTCCCTCAACTCTCTGGTGCTATTGAATGACTTAATTTAGTCCCTAAAGTTTGTGAGAACACAATAGTCTAATGACTTAGACTGTCATTAGACAGTCTAATGACTTTCAACCAAGTGAAAGCTAGTGGTGCATTTGAGCAAGAAAATGCATAGTTGTGAGCAAAATCCATGACTGAACATGTGACAGTTGGAAGAGGTTCAGATTATTTCAAAACCTGGCCCCAAAACCTTTTGGGTCAAATGTGAACCTTTTAACGGCATTATATGAGTAAAGCACACAGACAATGCTACTGTTTGACCACGATTTCACAGTTTCTTTGCAAACAGTGTTCATATTTTCATATTTTGTTTTTCCCTAACTGAACCACCAAAGACAGGAATTTTGTGTGTATATACAGTGTGTGTGCATATACAAAATCATGATCTGGTAGAATGAAACTCACTTCCTTTTTCTACCAAATAGAAAGGTTTGGTTTGCTGTGAAATAAACCAGAAGTTTGAAAAACTCTGTAGTGATTAAGCATACTTAATCATTCCTTGTTTAGAAGCTGTAGACTCCCCTTCTACTTTACACATTCACACCAATTTGCACAAATTCATCCCTGAAAAGAACAGAAGACGTTGACAGCAAGCACAGCTCCTGAGACCAGCGTGTTGAAAGGGCTTCCGTTCCGACGGGTGCCTGTTAACTCCACTGGTGACTGGCTATAGGCAGGTTCCAATCTGTGGAGAACTTGATTCATTTTCAAAAGGATCCCATGAAGTTAACAAATCACACTTTAAAGGCAGCAGTTCTTAAATTCGATCAACTCTAGTTTTGTTTAAACCAAATAGAAATCATCAATGAAATTATTTTCAAAGGTACTGTAACAAACTGGAAAATTTTTTTTAACAGTAAGCACAGTTAATCCCAAAATAAGAGGGTGGCTACAGGGAAAATGTTACATTTTAACACACAGTGAACATTTTGATGACAGGGGTTTTGGAAAAGCCAAGCAAAAATTATTTCATGATGTGTAACATGGAAGTAAATATTCCAGAAGGGTGATCTTGCCTATTTAGAAAAGGCCAAATAATCTCTGAATTCCCTTGAAAAATAAATCTTTGTGACTGCAGCGTGCTTGCCCTTGGTTTCTGTGATTTTATGCAGTTATTTTTAAGGGGAAGAAGAGCCAGAAGTAATAAGATATTTTTTCATAAAAATCTCCCTAAGTTACATAAGTTGAGCAGTCACCAAGCACTTATTTATGGGCAAATGATAAGTAAACGAGGGTGCCTTTTTCTGGTTTTTCTTTATCACCTACATCTCCACCCTTTCTTTCTTTCCATCGTGTTTTGGCCTCCATGTTGCAATACTCTGTGATAACGGAATCCAACTTTTAGATGTTGACTGTTGCGGTAGGTCGGAAATTGCATTATTTGATTTGCCATAATCACCCTCTATAATGTTACGTGCAGCTTATTTGAAGCATGACCTCTGAACTAAGTTTTTATAAAGCTCACTAGACAGACTTCTAGGATCTGGATTAACAACAGACTTCTGTTGCCTCTCAGTCTCCATCTTAACAGTGCTTTTGAAGTTTATACAGAAAGCTTTAAAAGTTAGTTTGTGCCCTTGGTTTTTACTCTTACAACTGCTAAAATACCTCTGTAAGCCTTATCTTTTATTCTTTCATATGTTGTATAATAAATGTATAGAATCCATTGACCAACTAAATTGTTGGGTGTCTGTAAATGAGACCAAAATGTGGGTTGCTTCTTTTCATGAAGTCATTTCTCTCGGGGGTTACTGTCAGTGAACTGCAGCTAACCTGTAACTGTGAATGCTTCGTGTCGTCAGTATTTGCATCACCTTCATAAACGTGTGCAAGTCCTGTGACTCCCAGCTTAACTGAAATATTGTTATGCCACCTAACTTGAGTACAGCAAACTGGTTTTAGGTTTTAATGTAATTGATGTAAAACGATACCCCATAAATAAAAAAGTTATTTGTGTTTGGTTTCAGAAC EMBV3_30935 CAATGCAGAGCTCCTGCGCTATTCCGAGAGGGCACAGTGAATAAAGTGTCCTCGAGCCAC Variant GeneID:512375|TWISTNB:NM_001105622:23_cdna 274^415 2 EMBV3_33790 GeneID:512375 4 GENE TWISTNB MGC140293 TWIST neighbor EMBV3_04585 GGAACTGCAATGCTAGGAGCAGGGTTGTGTGTTGGATTTGACATAGATGAAGATGCATTG Gene GeneID:614427|METTL5:NM_001099135:43_cdna Constitutive 1 NULL GeneID:614427 2 GENE METTL5 MGC152434 methyltransferase like 5 EMBV3_05458 AACTTGGAACACCTCAAGATTCACCTGAATTGAGGTGCACGTCCAGCAAGCAAACCAGCA Variant GeneID:507031|STX7:NM_001077864:5_cdna 272^767 3 EMBV3_07589 GeneID:507031 9 GENE STX7 NULL syntaxin 7 EMBV3_26082 GATGTTTACCTGGCTGTTCAAGTTGCTCTCCTCTTCCCTGGCTCAGACTTTTGGTGAGAG Gene GeneID:515128|LOC515128:XR_084590:195_cdna Constitutive 0 NULL GeneID:515128 16 PSEUDO LOC515128 NULL similar to major facilitator superfamily domain containing 4 EMBV3_10077 TTTCAAAAACAATTATAACCTGGTCCCATCTTTCTCGGGCCTGGGCCTGCTCACACGGCA Gene GeneID:407235|ADIPOR1:NM_001034055:37_cdna UTR3_Alt 3 NULL GeneID:407235 16 GENE ADIPOR1 MGC127115 adiponectin receptor 1 EMBV3_03974 GGTGCCTCCCTCAGGAAAATGGTGAAGAAAATTGAAATCAGCCAGCACGCCAAGTATACC Gene GeneID:504413|RPL37A:NM_001035008:53_cdna Constitutive 0 NULL GeneID:504413 2 GENE RPL37A MGC128148 ribosomal protein L37a EMBV3_19409 GACCAGAGTTTGCTCTCTGGGTGGGGAAGATGCCCTGGAAAAGGGAATGACAACACACTC Gene BVT0102_341376 + 0 NULL GK000029.2:36807800-36844871 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00167415 1 XLOC_102251 NonCoding TCONS_00167415 XLOC_102251 NonCoding NonCoding - 29:36842461-36844406 - TSS125393 1945 2 TCONS_00167415_5 143 0.399485861182519 1 0 0.000447693545323635 0.000123991007740117 2.85469996726587e-05 0.000700196272933841 0.000134535038889113 1.10346113641169e-05 0.000227871234789549 6.08197726496565e-06 6.49059818112666e-05 0 3.53087828569148e-06 0 2.9504179759903e-06 8.46476875265075e-05 0.000254769045763563 0 0 3.87006363365236e-05 1.84342661972319e-05 2.5881685388231e-05 0.000390196393665695 0.000431124499073191 4.71674141129965e-06 3.44774810538972e-05 8.90548615369463e-05 9.78033799143548e-05 0.000132546285718375 0.000187658851348209 1.79707702232669e-05 0 XR_239764.1 LOC100848447 PREDICTED: Bos taurus uncharacterized LOC100848447 (LOC100848447), 9e-56 223 83.56 0.110025706940874 0 noncoding 0 0 0 0 0.0700850982434125 0.55634176898765 -0.000312056300974473 0.994857610087545 ATTTTCACAGAAATTTTTATTTCATGCTTTTCACTATTGTACATTCATTTTTCATTGAATCACACAAATTGGTGAATTAGGACAGGTTCTTAATATTCCCACTTGACAGAGAAGGAAAGACAGTCGCATGATGAACGGTTTGTCCATAGTTACAGGGCTGCACCAGTCCACTCTGGCTGCCAGAACAAAATATCACAGACTGGGTGGCTAAACAGCAGGAATTTCTTTCTCACAGTTGTGGAGGCTGTGAAGTCCAAGAGCGTGATGCTGGCCAGCTTGGCTTTCTGGTGATGAGGGCTCTCTTCCTGGCCTTCTCACTGTGCCCTCACATGTTGGGGGTGGGGGTGGGGGTAGGTGGGTGAGCATGGAACAAGCTCTCTGTTCTCTTCTTAGAAGGGCACTAATCCCCTCTTCAGGGCTTCCCCGGCAGCTCAGATGGTAAAGAATCTGTCTGCAATACAGAAGACCAGAGTTTGCTCTCTGGGTGGGGAAGATGCCCTGGAAAAGGGAATGACAACACACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAAGAATTCTGCGGGGTTACAGTCCATGGGGTCACAAAGAGTCAGACAGGACTGAGTGACAAACACTTCCACTTTCAATCCCCTCTTGAGGGCTGCTCATGACCTCATCTAACCCTAATTACCTCCCAAAGGCTCCATCTCCAAACACCATCATTTTGGGGGTCAAGGCCTCAGCAGGCATGAATGTTGGCGAGGATACACTTCAGTCCATAGCAACAGCTGAAGGCTGAACTAGGGCCAGAATCCCGCAGAAGGGATTTCCATGATGCTGCACAAACATGAGCCCGTGTGTCCAGGATGAGGGGACCTGCACTGTGACCTACCTACGTCTTGTCAGTGGCAGGAGAGCTTCGGAAAGAACCAGAGGAGCAAGTGGGCTTTCCTGGTGGCTCAGACGGTAAAGAACCCGCCTGCCAGGGTCCATCCCCGGGTTGTGAAGATCCCCTGGGGGAGGAAATGGCTACCCACTCCAGTCTTCTTGCCTGGAGAATCCCATGGACAGAGAAGCCTGGGGGGCTACAGTCCATGGGTGGCAAAGAGACACAAACAACAAAGGGTAGCAAGTGTCATAGTAGGGAACAGGGCTCTGGGGATTCGGAAGCAGAGGCGAGCAGACGAAGAGAAAGATGTTTACAACACGTAACCGGAGCGAGGACAGTGCAGGCATGGAGAGGACATTGGAATGGAAAGGTGCAGGCTGTCTTTGGGGAATGGGGCAGAGCCTGTTCAAGTCCAGGACCGGGCGCGTCCTGCAGTGGGGCTGCAAAGTCCGGCCTTCTCCTGGTTGGACACTGTCTCTTCGCTTCTACCGTCTGTTTCCTGGGGGTAGAGACCCTGCTCTCTATGTATTTGGAAACGAGCAAGGACGCTGCAGAGGGTGGTCCATAAACCTCACGGCTGCAGAGAGGAAACAAAGCCGGCAGCGCCCCAGCACCGCGAGGCCCTGCCCGCTGTGAACCGAGTAGTACGGCGTCTCCCAGCTGGAGTGGAAGCTCTGCGGGGCATGCAGGCAGAGAGAAGCAGGTCTCTTGCTAGCGATCGTCAACCGAACAAGAAAGAAAAACGATCTTTTCCTGAAACACACGAGGAAGGCCTGGACCTGGGCTCTGAGGTCAACGTGGTCCTCGCACCGCTGGTCTCCGGTGGGAGGGAGCTATCCCGGGCTCTAGTGGCCGCCGGCAAGGAGTAGGAAGGCTGAGGCCTAAGGACCAGCGGTCGAGAGCTTGCAAACAGCGACTCGGGGCGGGCGGCGGGCTGGGACCGGGCGCGCCCTGCGGGGGTTGGGGCGGAGGAACGCAGCCTCTTGCAGCCCTTCTTCTGCCCAGGAGGACGGCCTTCTGCAAACCTGCCTGGACTCGGAACAATTCATCCTGTTTTTCCTTTAAAAAAAAT TCONS_00163606 . 5' 407 TCONS_00163606 . 5' 407 EMBV3_39733 GCATCTGGAAATCAAAGCATCCTGACCCTCTTTTACCACAATGCTCCCTGGGGCTGCTGA Gene BVT0102_201241 + 0 NULL GK000018.2:11975910-12379848 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20231 CCTTTCACCTATTAATAGAATTATACAAGTGATGTATACATACATACATATATATATATA Gene GeneID:504769|CYP2B:NM_001075173:541_cdna Constitutive 2 NULL GeneID:504769 18 GENE CYP2B NULL cytochrome P450 subfamily 2B EMBV3_12607 CGATATGTCTAAGGAGATGCAACAGGACTTGGTGGAGTGTGCTACTCAGGCATTGGAGAG Gene GeneID:100335965|LOC100335965:XM_002685344:205_cdna Constitutive 0 NULL GeneID:100335965 2 GENE LOC100335965 NULL dynein, light chain, LC8-type 2-like EMBV3_26553 CATGCTGAACTTGACCGAGAGGCACATTAAGATCTGGTTCCAAAACCGCCGCATGAAGTG Gene GeneID:538927|PDX1:XM_002691835:91_cdna Constitutive 0 NULL GeneID:538927 12 GENE PDX1 NULL pancreatic and duodenal homeobox 1 EMBV3_17664 CAGTACATAAGCAGAACGTATTTAGCCATTACCCACGTGACACCACCGAAAATAATACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01003 GACCTTTAAACGAGTTTCATTCTTTAAAAGGTACACAGCAGAGACGCGGACACCACCACA Variant GeneID:506830|MPPE1:XM_002697747:253_cdna 360^476 2 EMBV3_01378 GeneID:506830 24 GENE MPPE1 NULL metallophosphoesterase 1 EMBV3_32647 GAAGTATTCCACGACGAGAAAGAAGGAAGTCCTGCCGTTTGTGACAACATGGACTTGGCG Gene BVT0102_318859 + 0 NULL GK000021.2:66706942-66740463 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25913 GATGCGACAGAGCTCGAATGCTAACAGGCATGCATGGATAAATGGCCTGTTTTTTAAGGA Gene BVT0102_011684 + 0 NULL GK000027.2:36907474-36923761 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158369 1 XLOC_096823 NonCoding TCONS_00158369 XLOC_096823 NonCoding NonCoding - 27:36919004-36919573 - TSS118694 569 1 TCONS_00158369_1 63 0.994727592267135 1 0 0.000239115894276449 0.000794690941419381 7.31862678616269e-05 5.83770977108905e-05 0 3.1432820027306e-05 0 0 0 0 0 0 0 0 0 0 0 0 0.000441094132663813 0 0 0 8.06155477655101e-05 0 0 0 2.0594567079563e-05 0 0 0 XM_002686125.3 CD58 PREDICTED: Bos taurus CD58 molecule (CD58), transcript variant X1, 6e-39 165 79.78 0.302284710017575 0 noncoding 0 0 0 0 0.0433259604032909 0.721984547088531 0.0340120240169815 0.474053991593003 GACTTACAGGAAAGATTCAAGAATAATGCAATGAAGATCCATAGATCCTCCACCTAGATACACCAATTGTTAACATTTTGAATGTTTTTTCCTGACCATTTGAGAGTTTGTTGCAGACACACACTATGTCACTTATGAATAACTTTATATATCTCCTTAAAAAACAGGCCATTTATCCATGCATGCCTGTTAGCATTCGAGCTCTGTCGCATCCGACTCTTTGCAACCCCATGGACTGCAGCCCATCAGGATCCTCTGTCGATGGGGTTCTCCAGGCAAGTGGGTTGCCGGTGCCCTCCTCCAGGGGATCTTCCTGACCCAGGGATTGAACCCACATCTCTGTATCTTCTGTATTGCACAAGGATTCTTTAAAGCTGAGCCACCAGGAAGTCCCCATTTCTGCATAATCAAGGTATAATCATTACCCTCAGGAAATTTAACATTGTTACAATACTAATACAGTCGACATTCAAATTTTCTCAATTGTCCCAATAATGACCCTCAATAGCTGCTTTTTGTTTTTTGATCCAGGATGCAATTTAGGATTACATGGCTCTCAGGGTCATATC TCONS_00155589 . 5' 241 TCONS_00155589 . 5' 241 EMBV3_15184 AATCTGAGCCTCCTGCACTCAGAGTGTCTTAGCCCTTGACCACCAGGGAAGTCTCTGAAA Gene BVV0102_078565 + 0 NULL GK000002.2:73441558-73490616 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22359 AGCTCCAGGCTCTACGTGGTTTTGTGGAACCTGAGATCAACGCTGTAAAACATGGGTGCT Gene BVV0102_016286 + 0 NULL GK000015.2:56317354-56384699 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059655 TCONS_00059663 TCONS_00059667 TCONS_00059662 TCONS_00059665 TCONS_00059649 TCONS_00059664 1 XLOC_036480 Coding TCONS_00059667 XLOC_036480 Coding Coding UVRAG 15:56265117-56320300 j TSS44734 3786 1 TCONS_00059667_1 274 3 0.931445036424921 0.000537703939966395 0.00179999050547417 0.00123859636835278 2.37319554349816e-07 9.04863220988851e-08 0.000356572282576678 0.000469869364594265 2.2804924422895e-07 0.000832774054397804 6.11624028850573e-08 3.02989052845056e-06 3.27918758171926e-15 0.000197235073682668 0.00018538570731531 7.82958013613494e-11 0.00403582269690151 1.42832495026913e-09 0.00472651883204959 1.27663600397023e-06 0.000113940711198915 0.000171925634741492 7.86792713262783e-07 1.09313540237672e-07 0.00105275295283326 3.90453133275587e-05 1.21794314743853e-06 0.000474694442631862 4.30086298888162e-07 0.000167327112743579 0.000430062948372787 NM_001193026.1 UVRAG Bos taurus UV radiation resistance associated gene (UVRAG), mRNA. 0.0 1438 100.00 0.210248283148442 NM_003369.3 UVRAG Homo sapiens UV radiation resistance associated (UVRAG), mRNA. 0.0 2966 78.40 0.958003169572108 TCONS_00059667_1 sp|Q9P2Y5|UVRAG_HUMAN UVRAG_HUMAN UV radiation resistance-associated gene protein; 3e-151 444 88.01 0.970802919708029 0 coding 1 0 1 1 -0.00141803142904662 0.991672775303627 -0.00760387952175828 0.923322778155687 GCCACTGGCCCTTTATGCCAGGAAAGCTGAACTACTTCACTGAGCTAAGATATCAACATGGACTAGGGACTCCAGACTTGAGGCAAACTCTTCCTAACCTGAAAAACTTCATGGAGCACGGACTAATGGTCAGGTGTGACAGACATCACACCTCCAGTGCAATCCCTGTTCCAAAGAGACAAAGCTCCATATTTGGGGGTGCAGATGTAGGCTTCTCTGGGGGGATCCCTTCACCAGACAAAGGATACCGGAAACGGGCCAGCTCAGAGAATGAGAGACTCCAGTACAAAACCCCTCCCCCCAGTTACAACTCTGCACTAGTCCAGCCTGTGACCCCTGTGCCCTCCACGGGAGAATCTGACAGAAAGACAGCATCTCTGTCTTCCTCCTTGGACACCTCCTTGGACCTCTCCAAAGAAAACAAGAAAAAAGGGGTAGATCTGGGCGACAGCTTAAATGGAAGCCACGTGAGTGTGAACACTAGCCAGGAGCAGGGACAAGCACTCTCGGGGCCTCCGGCCACAATCAACGGCACCCTCCTGCCTGGTGAGCAGGCCAGCTCGTCTGGCGCCCAGCTCCCTGGGAGCTTCCACCCAGTCTCGGAAGCCGAGCTCTGCTGCACCGTGGAACAGGCAGAAGAGATCATCGGAATGGAAGCCACAGGCTTCACCTCAGGCGATCAGCTGGAAGCATTTAACTGCATCCCCGTGGACAGTGCTGTGGCAGTGGAGTGTGATGAACAAGTTCTGGGAGAATTTGAAGAGTTCTCCCGAAGGATCTATGCACTGAACGAAAACGTATCCAGTTTCCGCAGGCCACGCAGGAGTTCTGATAAGTGAAGTGAGCAGACAGATGGTAGGACCAGGATGGAGTCACTGCTTGAAATGAGGATAAAGCTGCACTGGTTACCTTTTGTAGTAATTATGACACAATGAATATTAATGGAGGATATTCCTCAGAAAAATAGACTTTGTGAATCAAGGAGGGACTCAGGATCATTGTGTATCAATGGGCCAGACAAAGTTAGATTTTGCTTGCAAGATTTTGCTTTTCAGGCCTGACAGTTGTTTTAAGGCAAAAGTCACTCTCTAGCTTGAGTCACCTTATAGGCATTTGTCTGCTTTTTTATTTACACTTATACGTTATCCTCAGAGGGAAGATGATAATATATAAATAATATAATGAACTCGCCTTTAGATTCTCACAGCATTTGCCCTCACCATAGTTTATGAAACTTTTGGGAAAATTGAATATTCAGTGAAAGGTCTCCACCATTGACTGAAGGGTCTCTGGCCATCCGTTAGGTTGATGTGTAAGCAGCACAGTGGTCTCCGATACAGAGGCCCGTCGGCCTCTGCTCCCAGGCTCGTCAACCCAGCTGTTACACCACTGGTGCAGAAGATGCCTTGTGCATCCTGACCACAGGACATCACATTCGCTGGTTCTTTAATGCAGTTGCCATGACCTCCCACCTCTTTCAGCCAGCCATACCCTTGAAGCAGCCCTCAGATTATATGAAAAACCTCACCTCTGGAGGATTCCAGGAGACCCTCAAGAACCCTCCCCTCCAAGGTTACTATAGTCAGACAGCATCAAGTTCCCTCTGGGGGCCAAAGTTTTTATGTGGGCAGATGCTGTTGTCAAAAACTGGGTGTGCTTTCTGGCAATGCACTCACCTTGTAGAAATCCCTATATGTAATTCCCATGTTAATTTATTAAATTTCAGTTGGAGAGGAGGCATTGTGTATGATGAAATATACATAGGGAGTCAGGCTGTCCAGTGTGCAAACTGTGAGGCAGTTGATGTTGCTGGATTCAGAGACTAGATGAGGCATAGAATACTATTGGTATGTGTGCAATTGCATAAATATTAAATTATGTTTTTGAAGTCCATTTTCATTCCTGGAGCTCAGAGTTCATTTGCTGTTGCTGTATACTTTATTTACCCAAGGACATCGCCTCAGGGTTGCAAGCTCTTTAAGGAGATTTTATGCTTATATCCATGTATTATATAGAAGAATAAAAATTGAGTTTACTTCACTCAACCTGATTTTTTTCCCAGCTTTGAAATTCCTCTTGAACCTATATTTCCATATGTTACATCATGACAGGACTAGCCTGAGCAAAACCTGTGGCTGTATCTAAGCTAATGTTGTTGACTTCATTTGAGTTTACGTATTGTATATAGCAACACGCCATCACAGGTGTACTCTGTAATAGCTCATTCGTCCTGCATAACAACTTAACTCATAGGTTCATAATCATTGTCATACTTCGTCCAAGCATTCCTGGGCTCAATTTTAATATATAGCTACATTGTTAAATGGAATAGTTCATGTTGTTATTTTTTTCATGTAAAGAACTCACAGAATCATTGCATGACAGACAGACCCAACTTGCAAGCAATTAAAAGCTTTAACTGGATCTGAAGAAATCCATCTTATTTCTCATAAATAGGTGGAACTACTCCAAACCTGGAGCAGAAGCCATCTGTAGAGTCAAGGCTTCCTTGACAGTGTACTGTCTTTCATTTTAGAGTAAGGGTGGAGCTAGACATGGTCTTAGATGTACATCCGACTGGGCTGTGGGTCCTCCAGTGAAGCAACATCTACCTCCCAAGCCCAAAAGAAAGGCTTTGAAGGACTGTATTAGTAGTGAACAATGGAAGGTGAATCACGTGTGATTTGTGGTTCCTCAGATATGGGAGAGACCTTTAAACTCCATGCCAAACTCGAAGACAAGGTACATTCGATTTAGGCCCTGCAGCCGGACCACATATAGGAGCACCCATGTTTTACAGCGTTGATCTCAGGTTCCACAAAACCACGTAGAGCCTGGAGCTCTGGGATTTTGTCAGTCAGTCTCTCAGTCTCCCATTTATGGACTCCCTGATTCTGGGGTCCACAGCTTTTCGCCCCCACAGCATGGAACCCCACCATTGACTGTGATCAGGTAGCCCAGAACTGACGGCTAGTTCCCTGCACACTTTCCTGACCCACACTGTGTCCAGTGATGTTACGCCTCAGAACACCACTTGTAGGTTTGGGTTTGTTTAGATTTTGGATTTTCATTGAGTTTGTTTGATGTCTGCAGTTTTCACCATACTTGGATATATGTAAATCCTACAGCATTACATTCTCCAGGAATAAATCTCTGACATTTCCCAAGGCTGCAGACTTCGTTTTGCCTCTGTTTAAAGTGGCCAAGGCCAAAATATGGGATGAAGTTATTATCTCCTACTAATCTTTGTAATTATTCTTGTAAACCACTAAAAAATCAAAATTGCTTTGAGAATATAAGTTGAAAACTGTCCTGTCCATTTCTGAACTGCTAAGGGCCCTTTCAGTTTTCATGTAGCCGAAACACTCTTAACAGCCAGCAAATGTTATCAGATGAATATTTGCTTGTGTTTTCTCTCTCTACTTCCCCTTACCCACTTCAAAAATTCCAGAGATTTTTTCCCCCCAGAATATTAGTTTTGGAAGATTGTATCCAACTATATTTTTTTAGCAGTTCTAATGGTGCCCATTTATCCTGACCTAACTGGTTATTTAAATAATTTTTTAAACCACCACCAATAATAAATGGCATGTGAAACTGATCTGTTGGTAATTGGAAGAAAAGTCAGCATCTGTATTTATAAAATAAAATTGATTAGTATTTATTTTGAGAGTAAAAGTGTATGTTATTTCCCTGTGATGTTTGAGTCCTGTCTTCTTCATTGTTTTGAATTTCATACTGAAGCGGAGTTAACTATGAAAACCTCATTCTTAAACAGTCTACCAG EMBV3_03006 CCCAGCACTTCCGGGGGCACACGGGGGCGGGTGGTCTTGCAGAAGTGCAAAGTCAAGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11574 GCTGCAAGAAGGGTAGAATGGCGAAGTGGAGGAGGGATATAAAAGAGACCATCAATTGTC Gene GeneID:100139555|LOC100139555:XM_002690222:13_cdna Constitutive 0 NULL GeneID:100139555 9 GENE LOC100139555 NULL hypothetical protein LOC100139555 EMBV3_34505 TGTTGCGTCGCCCGCACTCGCCAAGCTCAGGCTGTTTCTGATGCTTGGAAGCTATCCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36580 GCCTTATGTAAAGCACTTGAACATCCTCACCAAGGTCGCCGTCATCTGGTTAATACTCCC Gene GeneID:509865|RWDD4A:NM_001076824:28_cdna UTR3_Alt 2 NULL GeneID:509865 27 GENE RWDD4A MGC139956 RWD domain containing 4A EMBV3_29136 GAGAATCTGAGGAGTAAGACTGGGCGATGCTCAAACAGCTACCAAGACAGAGTGGCCAAG Gene GeneID:782807|LOC782807:XM_002690248:72_cdna Constitutive 0 NULL GeneID:782807 9 GENE LOC782807 NULL similar to trace amine-associated receptor 7A EMBV3_12287 TGTGGTGAAAAGGAAGCTTGCAGCTCATGATAATTTGAAACTGATAATTACACAAGAAGG Gene GeneID:515768|FABP2:NM_001025332:30_cdna Constitutive 0 NULL GeneID:515768 6 GENE FABP2 NULL fatty acid binding protein 2, intestinal EMBV3_19503 GCTGGGGAGATTGTGGAAGTGATAAAGGAGGTCACAGAGGATAAGGGCTGGTGGGAAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13880 GGCTTGGAGATAGCATTGAATGTATTGCATTGACGTTTTTCAGATGACCCCAGAAAGCAT Gene GeneID:617248|GRHL1:NM_001076450:237_cdna Constitutive 2 NULL GeneID:617248 11 GENE GRHL1 MGC139899 grainyhead-like 1 (Drosophila) EMBV3_13474 GAACTTTTCTCTCCGACCCCCAAACCCAGAACTCGCTTCCGCCACTGTCTTCCCCAAGTA Gene GeneID:786702|LOC786702:XM_002692279:1625_cdna Constitutive 0 NULL GeneID:786702 13 GENE LOC786702 NULL similar to mCG13184 EMBV3_19243 TCGACCTGAGTCATTGAGGGGAAAGTCCAGGTAGGGATGAGTGATGCATTATTGGAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21674 TATATGTGAGTCATCCACTGGGGGTTTGCTCCTGAGGCTGCCCTGAAGGATTTGGGTTTG Gene BVV0102_350359 - 1 EMBV3_07302 GK000006.2:26802350-26850887 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18292 TACTTACCTTTAGCGTCAAGACACATGACAGAATCTACTACATGGTGGCCCCGTCGCCAG Gene GeneID:509784|PHLDB2:XM_002684769:276_cdna Constitutive 0 NULL GeneID:509784 1 GENE PHLDB2 NULL pleckstrin homology-like domain, family B, member 2 EMBV3_12579 GCCACATAATCGAGCCTGGCGGGTGAAGAACTTTGAACATTTGGGTTACTGCTTCCTGTG Gene GeneID:526585|F2R:NM_001103097:18_cdna UTR3_Alt 1 NULL GeneID:526585 10 GENE F2R MGC152489 PAR1 coagulation factor II (thrombin) receptor EMBV3_22027 AGGCATCAGACAGTTCATACTGGAGGGAAACCTTACAAATGTGATGAGTGTGGCAAGGCC Gene GeneID:515089|ZNF43:XM_002695293:110_cdna Constitutive 0 NULL GeneID:515089 18 GENE ZNF43 ZNF160 ZNF665 zinc finger protein 43 EMBV3_33995 CCAGGCCCTGGCCAGCGGTCAGATTGCAGCTGCCACCCACAGGACCCGAAACATCATGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24688 TCATTCTTCATTTGTTTACGAGGCTGGGAAAGCCACTGGTCTTGGGCCAGGCAACTACGT Gene BVT0102_271674 - 0 NULL GK000009.2:61678185-61722158 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15449 GCCCTAGCAGAGGAAAATAAGAACACAATGGATGTCGAGAATGGCGCTTCTATGGCAGGA Gene GeneID:782956|CCDC126:NM_001082472:47_cdna UTR3_Alt 2 NULL GeneID:782956 4 GENE CCDC126 NULL coiled-coil domain containing 126 EMBV3_03466 ACGGGTGTCTGCTGGGAGACTGACTCCTGAAAGCCAAAGCAAAACCTCAGAAGTACTGAA Gene GeneID:282087|SYNJ1:NM_174468:13_cdna Constitutive 0 NULL GeneID:282087 1 GENE SYNJ1 NULL synaptojanin 1 EMBV3_18013 GGCCAGTGGGAAGCCCAGCCTGCTCTGGAGTCCAAGTAGAGAGTGCGGCCTGATGGCCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22775 TGTCTTGATCCATTCCAATCTATAATCAAAAGATTTTGTAGGCAACTCAGAACACAGCTC Gene GeneID:523498|MTSS1:XM_002692623:70_cdna Constitutive 2 NULL GeneID:523498 14 GENE MTSS1 NULL metastasis suppressor 1 EMBV3_17119 GCATGAGACAGGAGATGGAATTGGCTATGAAGATGCTGGAGAAGGACGTCTGTGAGAAGC Gene GeneID:514798|RUFY3:XM_002688341:116_cdna Constitutive 0 NULL GeneID:514798 6 GENE RUFY3 NULL RUN and FYVE domain containing 3 EMBV3_07489 TCATGGACCCAATATCTGCTCTCTTGTCAGCACCCATGTCACCATTTACTGTGGGATGCC Gene GeneID:524387|LOC524387:XM_002687964:77_cdna Constitutive 0 NULL GeneID:524387 5 GENE LOC524387 NULL similar to CG15040 CG15040-PA EMBV3_13940 GAGCGGGAAGTACCAGTGTCCTGGAAGGTGGCTGGCTCTGTTGGAGATTCAAATATGTAT Gene GeneID:511195|CYP39A1:NM_001098938:261_cdna UTR3_Alt 2 NULL GeneID:511195 23 GENE CYP39A1 MGC160008 cytochrome P450, family 39, subfamily A, polypeptide 1 EMBV3_23051 ACGCCTGAAGTTACTCTCCTGGCTTTGCCCAACCTCAGCAACTTGTAAGACTGATAATGA Gene GeneID:280752|CNP:NM_180993:9_cdna Constitutive 0 NULL GeneID:280752 19 GENE CNP NULL 2',3'-cyclic nucleotide 3' phosphodiesterase EMBV3_12871 TTTAAAGCTGCAGGTGAGATAACAAGGACCAGGCGATCGGGGCTGTGTTGCACATACCTT Gene GeneID:518839|RAB11FIP1:XM_002698733:196_cdna Constitutive 0 NULL GeneID:518839 27 GENE RAB11FIP1 NULL RAB11 family interacting protein 1 (class I) EMBV3_33925 CAGCTCTTCTTGCTGCTCCTGAGCCTCACACTGGCCCTCCACAACCTCTAGCTCCCACTG Variant GeneID:513699|TMEM205:NM_001037599:35_cdna 419^676 1 EMBV3_28029 GeneID:513699 7 GENE TMEM205 MGC133512 transmembrane protein 205 EMBV3_33546 ACAGAGTGGGTACGGGAAGAGGGAACCCGACTGAGGAAAAATTGTTGACTGTAGCTTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40176 GTCAAAGCCCTATCAGTGAGTGGCAAGTGACAAACTGCTTCTGGTGGCAGGCTTTAAGTC Gene BVV0101_027565 + 0 NULL GK000018.2:514846-1021247 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087892 1 XLOC_052681 NonCoding TCONS_00087892 XLOC_052681 NonCoding NonCoding - 18:1006279-1006685 - TSS65238 406 2 TCONS_00087892_2 46 1 0 0 0 0 0 0.000778274978533676 0 0.000531461267415803 0 0 0 0 0 0.000190814368736811 2.31723433769232e-05 0 0 0 0 0.00178390193375263 1.77128979805554e-05 5.9817343222828e-05 0 0 0 0 0.00109326253747422 2.88627603131671e-05 0 0 0 XR_235673.1 LOC101907964 PREDICTED: Bos taurus uncharacterized LOC101907964 (LOC101907964), 4e-33 145 65.53 0.967980295566502 XR_246413.1 LOC100507283 PREDICTED: Homo sapiens uncharacterized LOC100507283 (LOC100507283), transcript variant X1, misc_RNA. 3e-53 212 79.34 0.544334975369458 0 noncoding 0 0 0 0 -0.0373783065886158 0.752843650879681 0.0379968398518734 0.430661975813728 GAAGTCTTAAAACTTCTGTTGTCTCATCATTGGGTCTTTCCCTCTTTTCAAAGAAGCTCTCTGGCGATGCTTGTTTTTCACTCATTTTGGCAAGGGTTAGCTTGTGGGCTTACCAAAACCATGCCTGAGACAGTGTGCAGCGCGGGAAAGAGGCACAGACAAAAGTGGGAAATAAAATAACGGGCCGGCCGTGCGTGGATTCTGACTTAAAGCCTGCCACCAGAAGCAGTTTGTCACTTGCCACTCACTGATAGGGCTTTGATATGAGTCTGCAAAAAGTTGCTTCACTATGGTCTCTGCAGTCAAACGTCTCTGCTAATGATGATCTATATTTGCAGCCACTCCCACCACTAGCCTCACTGCCTCAACTCCACCTCAGATCATCAGGCATTAGATTCTCGTAAGG TCONS_00085124 . 3' 13275 TCONS_00085124 . 3' 13680 EMBV3_18661 TGTTCGTGGTGGAATTCTTCCTGCCGCTGGCGCTCATCCTCTTTGCCGTCGTGAGCATCA Gene GeneID:540198|LOC540198:XM_002691248:236_cdna Constitutive 0 NULL GeneID:540198 11 GENE LOC540198 NULL similar to G-protein coupled receptor TG1019 EMBV3_34082 AGTGCACACAGTGACACGAATACACCGTCTGTAGAACCGTCTTGTGATCAAGCTTCTGAC Gene GeneID:530188|DBR1:NM_001080290:42_cdna Constitutive 1 NULL GeneID:530188 1 GENE DBR1 NULL debranching enzyme homolog 1 (S. cerevisiae) EMBV3_01174 CAGGCATTAAGAAAGTCAGGAAAGTTATGAAGAGGAGGAGAGACTGTTCTGGCACAGGTC Gene BVV0101_041191 + 1 EMBV3_23231 GK000001.2:115296207-115476360 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06110 AAACAAGAAGAACTTATAAGAGCCTTAAAGGAAATTAAACTGCCGTTTGTAAAGATGGAA Variant GeneID:504746|ECT2:NM_001097573:7_cdna 307^399 3 EMBV3_08479 GeneID:504746 1 GENE ECT2 MGC138945 epithelial cell transforming sequence 2 oncogene EMBV3_05400 AGAGGAGCATAGTAGGAAGGTGTCTCCAGTTCAAATTAAGAATTGCATACTGCAACCAAC Gene BVV0102_340375 + 0 NULL GK000014.2:81019596-81058839 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058070 1 XLOC_035867 NonCoding TCONS_00058070 XLOC_035867 NonCoding NonCoding - 14:81051458-81052473 - TSS43747 1015 1 TCONS_00058070_2 60 0.0827586206896552 1 0 0 0 0 0 0 0 0 0 0 5.79097993271211e-07 0 0 0 0 0 0.000156127495589287 8.17846663361919e-05 0 0 0 0 8.77321488888045e-05 6.32693560202578e-05 0.000379887923732718 0 0 0 9.46322961297933e-06 0 0 0 noncoding 0 0 0 0 0.125982795787743 0.819810408938329 -0.0643994691938241 0.442394271761502 CATTTACAATTTATTGAACAAGCTGCTCATTTGATATTCACAAAGAATTAAAATGATTTGGTAAAATTTAAAGTGTTAATTCTTTACAATTAGCAAATGGCCACAAAGCAAATAAACTACAATCACTATTTCGTCTGTGAATCATCCTATAACCTCATAAACAACTTCATGCTTTTGAATCAAAAATAAAATGCTTTTCAATGGAAAAATACAGAACGCTTTTTTCATTATCCTTTGTTGGTTGCAGTATGCAATTCTTAATTTGAACTGGAGACACCTTCCTACTATGCTCCTCTTATGATTTTCTTATTTAAAATAAAGAAAAACACAAATAAAAGAAGAAACATTCTTCTGCCATTTCTGGTTCTATGGACATCATCCTATTATCCATAATAAAATGAAAACCAATAAAATGTCACAACGAATACAAATGAAATGTAGCTACAAACTATACTTTCAACAAAATCTTATCTATGACCTCCATGTGACATAGCTGCAAAACCATATGTATCTGTACATATTTGTAGGGATTTGTGATTAGTCTGATGAGTGAATCTTTTATCACTTGCTGTTATTTTAGGATAACCAAGATTCTAAACAACCTCAAAAAATTACTATTTGTCTTTACCTGGGATGACTACTGCTGTGGATTGGTGACAATGCAGACTGAGAAATCAGGGAGAAAAGGGCTAGGAGAATTAGTAAAAAAAAAATGTAGTGAACAGTAAATAACACATTTCCAAACACTTAATGATTTTAACAGAATCTATAATGGAATAAATCACATATATATCTCTTGAACCACTAGCTTCTTAGTGCTAGCAGATTCCGAGTTGTCAGAGAGCTTTTTTACAAGACTCCTAGAGAAGGCAGGTACTCCTAGTTCTACAGATTACCACCTGAGTGCTTTTGTTTTGTTGCTTAATATCTCTTATCTGTATGCTATCAATAAGAGACTCACTTCAGGTCTGACAACACACACAGATTAAAAGTAAGGAGATGGAAAAATATATTC TCONS_00054026 TCONS_00054027 . 5' 185543 TCONS_00054026 TCONS_00054027 . 5' 185543 EMBV3_37402 CTTGCTGCATTCCCTGATTCCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTC Gene BVT0102_256496 - 1 EMBV3_40050 GK000025.2:27675009-27692130 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247122 TCONS_00173460 TCONS_00241066 TCONS_00173459 TCONS_00011558 TCONS_00173458 TCONS_00079314 TCONS_00034471 TCONS_00202228 7 XLOC_151234 XLOC_104361 XLOC_147730 XLOC_007109 XLOC_048199 XLOC_020687 XLOC_123873 Coding TCONS_00241066 XLOC_147730 NonCoding NonCoding - 9:59411083-59412679 - TSS180744 1596 2 TCONS_00241066_3 52 1 0 3.83618306476266e-06 0 0 5.20310846526627e-07 0 0 0 0 0 0.000371602900397673 0.000357601974581728 0.000119595869008014 5.78238343294847e-05 6.3436643798457e-05 0.000423366625732826 0.0434995119042029 0.00915912048134125 0.0335503791342459 0 0 0 0.0119063293741613 0.0103354717804554 0.0203104914748732 0 0 2.62224429621199e-07 0.0015197245229825 0.0010367077463294 0.00443118164624402 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 2e-70 271 86.70 0.143483709273183 0 noncoding ACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGGGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAAAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACATCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGCAGAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAGAAAAATAAAAAGAAAAAAGGAAAAAGTGAAAAAGAAAAAAGGAAAGAAAATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGATCGGAGGAGGAAGGAATCAGGGAATGCAGCAAGATAGAAAAAGAAAAAAAAAAGGAAGTTAGAAAAAGAGACACAGAGAGAAAGAGAAGGAGGAGGAAAGAAAAAGTTAGAGAGAAAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAGAAGAGAAGAGGAAGGAAAAAAGATAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGGAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTTACAAGACACTGTGGCCAGACGCCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCACCTTCCAGGGCCCAAGAGTTCCCCACTTGGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAACAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCCTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAGCCCAATGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTCGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAATAAATAAATAAATAAATGAAAGAGAAAGAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACA TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 EMBV3_25489 TATCCCATGACTCTCCTCACCACACCTATCTGTCTGGACTTCAGGATCTCAGGGCTTTAG Gene GeneID:782367|LOC782367:XM_002685918:40_cdna Constitutive 0 NULL GeneID:782367 3 GENE LOC782367 NULL similar to CD1D antigen, d polypeptide EMBV3_14519 ACCTGGGAAGAGGAGGACCTTGGGAAATACTCTGTGCGTGAGGGTGGGGTTTATGGATTT Gene GeneID:100300589|LOC100300589:XM_002700222:184_cdna Constitutive 0 NULL GeneID:100300589 X GENE LOC100300589 NULL similar to nyctalopin EMBV3_13892 CCTGTTTTCTGATGATATGCTTTTCCTGAGGTTTCGTTATATTATCCTGAAGCAGAAGTT Variant GeneID:512354|WDR47:XM_002686156:291_cdna 397^480 1 EMBV3_14832 GeneID:512354 3 GENE WDR47 NULL WD repeat domain 47 EMBV3_00278 CCTAAGTTTGAAGATTGGCTTTGTAACAAGACTCTGAACAGGAAGTGCCCCCTGGAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17109 AAAAACAGTGAGGACACCAGTGTAGTTGAGTAGAGGGTGGAATCAGAAGCTCACAGGGGC Gene BVV0102_093320 + 0 NULL GK000015.2:32445256-32583560 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38224 TTGTCACCTTTAATTATGACCACCAATCACAGAATGAGGAACACATTTATGAAGAGTAAG Gene GeneID:504417|PBLD:NM_001045886:272_cdna Constitutive 1 NULL GeneID:504417 28 GENE PBLD MGC128783 phenazine biosynthesis-like protein domain containing EMBV3_09618 GCCATTGGTGCTCGGAACTTGCTCAAATCTATAGCAAAACAGAGAGAAGCCCAACAGCAG Gene GeneID:445364|IFT20:NM_001013603:49_cdna Constitutive 1 NULL GeneID:445364 19 GENE IFT20 NULL intraflagellar transport 20 homolog (Chlamydomonas) EMBV3_03497 GCCGGATTGGACCCGAAGACCTTTAAGCCTTTCATTTGCTCTCTAGACCTTATTGGCTGC Gene GeneID:533874|PSMB3:NM_001034596:135_cdna Constitutive 0 NULL GeneID:533874 19 GENE PSMB3 MGC128032 proteasome (prosome, macropain) subunit, beta type, 3 EMBV3_01547 TCACAGCCCGTCTGATCTGTCAAAGCTGTCTTTTCCACCTGCTGGAGTTCAGTCGGTTTT Gene GeneID:540050|HSPA12A:XM_002698534:198_cdna Constitutive 2 NULL GeneID:540050 26 GENE HSPA12A NULL heat shock 70kDa protein 12A EMBV3_04915 CTGTGCACCAACACAACCAAGCAGACGGTCACCAGGCAGAACTCAACACTTATCTCCCAT Gene BVV0101_043995 + 0 NULL GK000007.2:70713973-70730932 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217608 1 XLOC_131548 Coding TCONS_00217608 XLOC_131548 Coding Coding HAVCR1 7:70727618-70733803 o TSS162021 587 1 TCONS_00217608_1 130 4 0.905724450194049 0 0 0 0 0 9.37713360742399e-41 0 0 0 7.24552406773338e-36 3.1438740512661e-78 1.70440476826906e-60 0 0 2.78425651461973e-06 0.00207749825978675 0.000188555115768629 5.71949716057166e-05 0 0 0 0.000479685565129577 0.000127724403841857 0.00234904562388487 0 0 0 1.4460490954655e-37 2.09671848093912e-05 9.21809036051245e-05 XM_005200175.1 LOC100298064 PREDICTED: Bos taurus hepatitis A virus cellular receptor 1-like (LOC100298064), transcript variant X3, mRNA. 0.0 708 98.06 0.700170357751278 XM_005265879.1 HAVCR1 PREDICTED: Homo sapiens hepatitis A virus cellular receptor 1 (HAVCR1), transcript variant X1, mRNA. 5e-40 168 73.08 0.485519591141397 TCONS_00217608_1 sp|Q96D42|HAVR1_HUMAN HAVR1_HUMAN Hepatitis A virus cellular receptor 1; 2e-48 162 61.11 0.953846153846154 2 noncoding CTCTAGGTGTAGGAAAGGAGCTGGGCCAATAGCATCATGCATCCTTGGGTAGCCATCCTGGGCCTCCTACTCCTGCCAGATGGTGTAACCTCTTACCATCGAGTGACTGGAGTGGCGGGTCAGAGTGTCACTCTACCCTGCTACTATAATGGAGAAGTCACAAGCATGTGTTGGGGCCGAGGGTCATGTCCTTGGTTGAATTGCAGAACTAACATCATCTGGACTGATGGATACAGAGTCACCTATCGGAGGGATGGACGTTACCAGCTAAATGGCAATATTCGTGGAAGGGATGTGTCTTTGACCATAAACAATGCTGCCGTGTCTGACAGTGGCTTGTATTGTTGCCGAATTGAGGTGAGAGGGTGGTTCAATGACATAAAAACCACCCTAGAGTTGAGGATCAATCCAGTCACAGATTCTAGTTGACCATGACAAGAACTTGGAGTTCATGGGAGATAAGTGCTGAGTTCTGCCTGGGGACCGTCTGCTTGGTTGTGTTGGTGCACAGGCCCAGCACAAGTCTCTTGTTTCCTGCTGCTTGATGAATCCCTGCTTTCATGTTGATTCCTAGCTCCACCTACAAC TCONS_00217609 s 3' 3140 TCONS_00217609 TCONS_00217609 s 5' 0 EMBV3_38079 TGTAGGTTCTCTGAAGGGAGGCAACAGGTTGGTGCTAGATGACGACCTTTGGGGGAATAG Gene BVT0102_325767 + 0 NULL GK000010.2:87346626-87645610 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022914 1 XLOC_013584 NonCoding TCONS_00022914 XLOC_013584 NonCoding NonCoding - 10:87635375-87635922 - TSS16804 547 1 TCONS_00022914_1 57 0.393053016453382 1 0 9.9493187680332e-05 0.000330662456892536 3.38354362929037e-05 4.55438483586491e-05 6.31814304750429e-05 0 3.19837661199431e-05 0 1.4424374271983e-05 0 8.36995043646618e-06 2.68739207055538e-05 0 0 0 0 3.03515206661669e-05 0 0 0.00017237231550364 1.10995191947497e-05 0 3.35431278008559e-05 0 0.000139329588689308 0.00018032268068579 0 0 7.09996396745664e-05 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 9e-87 324 92.34 0.393053016453382 0 noncoding 0 0 0 0 -0.148865328323546 0.273049387382407 0.0102536383456663 0.887667761218063 CAACCCCTGGAGCCCGGCCTTCAGATCCAGGAGCCCCGTCACACAGGCACGGTCTGGCTGACGCCTCTCTTCTATTCCCCCAAAGGTCGTCATCTAGCACCAACCTGTTGCCTCCCTTCAGAGAACCTACAGGTGGTGGCTTCTGAGGAAAAAAAAGTGTTGTTGTTGTTGTTTTTTAAGTTATTTTTCTCTCACGTTGTCTTGCTCTTCTAAGTTATAACCAAATTCTCTCAGAAAAGAATGGCAGCCAAACAACAAGCATGCGCTTCCTCGTGTCGTACTTCCTCTCATGCGGGTACGGCACACGTTTAGAAGGTACTAGAGACCTCCTGGAGAAGGCAATGGCACCCCACTCCAGTACTCCTGCCTGGAGAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGCTAAGGGTCGGACACGACTGAGCGACTTCACTTTTTTTCAGTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGGTCTTGCCTGGAGAATCCCAGGGACAGGGGAGCCTGGTGGGCTGCC TCONS_00018325 TCONS_00018326 TCONS_00018327 TCONS_00018328 TCONS_00018329 TCONS_00018330 TCONS_00018331 TCONS_00018332 TCONS_00018333 TCONS_00018334 TCONS_00018335 TCONS_00018336 . 3' 7229 TCONS_00018325 TCONS_00018326 TCONS_00018327 TCONS_00018328 TCONS_00018329 TCONS_00018330 TCONS_00018331 TCONS_00018332 TCONS_00018333 TCONS_00018334 TCONS_00018335 TCONS_00018336 . 3' 7775 EMBV3_42600 GGAAGTAATACAACTACATCACTGCCTTCGTGCTTTGGGCACACCTCCAACACCCCAGAC Gene BVT0102_026779 + 0 NULL GK000018.2:8778521-8931624 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37252 TACAGCAAACTTGATTGCACAACAAAGACTGAAATGGGTTTCCTGAGTACCAGTGGGGGG Gene GeneID:511188|EYA1:XM_002692699:98_cdna Constitutive 0 NULL GeneID:511188 14 GENE EYA1 NULL eyes absent homolog 1 (Drosophila) EMBV3_24515 CCACTTCTCAGGCAGTGACTTGCTGTTTCCAGAAGAGGGCAGCAAAATTCTAATCTGAGG Gene GeneID:614775|SEC22B:NM_001076343:74_cdna Constitutive 1 NULL GeneID:614775 3 GENE SEC22B MGC127664 SEC22 vesicle trafficking protein homolog B (S. cerevisiae) EMBV3_37864 CCGAATAGCGATGCTGTCTTGAATTGCCCTGCCTGCATGACTACACTATGTCTTGATTGC Gene GeneID:520143|EAPP:NM_001075800:26_cdna UTR3_Alt 3 NULL GeneID:520143 21 GENE EAPP MGC139672 E2F-associated phosphoprotein EMBV3_01666 TGACCTACTACTTCTAACAGATCCCAGGTTCATGGCCTTTGCCAATCCTCTTTCTGGCAG Gene GeneID:540487|MYOZ2:NM_001015676:2_cdna Constitutive 1 NULL GeneID:540487 6 GENE MYOZ2 CS-1 myozenin 2 EMBV3_06534 CACGGTCCTTGGCAAAGTGTAGCCCCTCTTGTAAGTTCCTGGGAGAATACTGGTATGATG Gene BVV0102_305048 - 1 EMBV3_35770 GK000024.2:58751842-58770278 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36199 CCGGCAGGCAGAGCCAACAGATGTCCAGTGCAGCGTGTCTCTTTAGTCTTCTGTTTATCT Gene BVV0101_003863 + 1 EMBV3_35613 GK000005.2:96154864-96408803 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26940 TCCTCTGGAGGAGGGTATGGCAACCCACTCCTGTTTTCTGGCCTGAAGAATCTCCATGGT Gene BVT0102_196775 + 0 NULL GK000030.2:28242706-28318602 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246624 TCONS_00246627 TCONS_00243972 TCONS_00246625 TCONS_00246626 TCONS_00246629 TCONS_00246628 2 XLOC_151049 XLOC_150327 Coding TCONS_00246624 XLOC_151049 Coding Coding - X:28316619-28321515 - TSS184860 3145 1 TCONS_00246624_3 340 0.175516693163752 3 0.358120531154239 0.0369417399158952 0.0256909798933795 0.0428112012028345 0.0100204839421485 0.0185426804480423 0.010605481588709 0.014096080937828 0.0131744106930659 0.0108907985687571 0.000316775646772502 0.000442665723648653 9.45164901839259e-72 0.000886064168412981 0.00140040293891102 0.000558296141252472 0 0 0 0.0186890915605703 0.0116114240350841 0.00499768847048446 5.919923276813e-28 0 0 0.0147363139046199 0.00988893186331655 0.00474330535097955 1.00567829943637e-28 5.32317856994097e-06 1.49578796663186e-10 XM_005200593.1 LOC508073 PREDICTED: Bos taurus melanoma-associated antigen 10-like (LOC508073), mRNA. 0.0 1846 100.00 0.324960254372019 NM_001011543.2 MAGEA10 Homo sapiens melanoma antigen family A, 10 (MAGEA10), transcript 2e-162 578 71.25 0.347217806041335 TCONS_00246624_3 sp|P43363|MAGAA_HUMAN MAGAA_HUMAN Melanoma-associated antigen 10; 1e-125 369 55.71 0.979411764705882 2 coding 0 0 0 0 0.204287528812249 0.329968720345335 -0.0726042368989904 0.158576911600372 GGGCTGACAAGAACAGCAGCCTGTGACACCTGGGAGCTCCCCTAAAGAGGAGACCTGGTCCCATTGTCCTGCTGGCTACATCCAATACCAGCCATCATGTCTCTGGGTCAGAAGAGTGAGTGCTGCAAGCTTGAGGAAGACCTTCAGGCCCCAAAAGAGGCACAGGGCCTAGAATGTGTGCAGGCTCCCATGGCTCAGAAGGAAGAGGCCACCTCCTGCCCCAAGTCCACCATCTCCTCTTCCCTTACCCCATTGATCCCTGGAACTACAGAGGAGGTGCCTGCCACTGGGGCACTGAGTGCTGTCCAGAGTTCTCAGGGAGCCTGCTTCTCACCCACTGCCACCTCAGCCACTCCACTGAGTCAAACTGATGAGAATTCCAGAAGCCAATTGGAGGAGGAGCCCAGCATCTCCCAGACTCCACCAGATCCTGAGTCTTCGCTCAGTGGTGAGCTAAACAACAAGGTGGCTGAACTGATGCAGTTCCTGTGTGTCAAATATGTAACAAAGGAACCCATCACAAAAGCAGAAATGCTGAGGAGTGTCATCAGAGAACACAAGGAAAACTTCCCTGAGATCTTCAGCAAAGTCTGTGAGTGCATGGAGGTTGTCTTTGGCATTGAAGTGAAAGAAGTGGACCCCACGGGACACTCCTATGAGCTTGTCAAAACGCTCAACCTCACCTATGATGGGATGCTGAGTAATGATGGGGGAATGCCCAAGACTGGCTTCCTGATACTTATCCTGGGTATGATCTTCATGGAGGGCAACTGTGCCCCTGAGGAGAAAATCTGGAAAGCATTGAATACGATGGGGGTGTATGCTGGGCAGGAGGATTTCATCTATGGGGAGCCCAGGAAACTCATCACCAAAGATTTGGTGGAGGAACAATATCTACAGTATCGGCAGGTGCCTCACAGTGATCCTCCACGCTATGAATTCCTTTGGGGTCCAAGGGCCTATGCTGAAACCAGCAAGATGAAAGTCCTGGAGTTTTTTGCCAAGATCAGTGGGACTGACCCCACTTCCTTCTTATTCTGGTATGAGGAAGCTTTGAGAGATGAGAGAGCCCAGGCCAGAACTGCCCCCGGGGATGATACTACTGGCCATGGCCAGTGAAAATTCCAGTGTCATGTCCAGCAACCTCTTCTGCCCTGAGTGAAGTCCAAAGCAGTTTCTTCAGTCTTCATCTGAAGACAACAGTCAGTGTTCCATGTAATGGAGGGCTAGGGTGGAACAGTCTATTAGCATTTTCATGTTTCTATTGTATATGGGTGATTTGGACATATAACTTTTTTTTTATTTGTTTTTCTCCCCCAAATATTGTTTAATAAAGTTTAATTAGCTCCAGAATCTAAGCTTATGAGTGACAATGATCACACAGTTATAGCTGTTTATCACATATAAGAGTTTTACAATTTTGCAAACACACTGAGAAACCCCCCAACTTTCCTTGTGATCTGAAACAAGGCATTAGAATAGGATTTGCTTGGAAATGTGAAAGTACCCAGCAGAAAAGTTAAGGATGAAGGGACTTCCTAAGTGGCTCAGTGGTAAAGAATCTGCTTGCAATGCAGAACCACAGAAGATGGTGGATTCAATCCCTGGGTCAGGAAGATCTCTGCAGAAGGAAATGACAACCCACTCCAGTATTCTTGCCTGGACAATTCCATGGACAGAGGAGCCTGGTGTTCTATAGTCTGTGGGGTTGCAAAGAGTCAGACACAACTGAAGCAGTTAGCATGCATGCATGCAGGAATACAAGAAAAGTATAAAGGATGGCTAATTAGGTTCACTTATCTCTTCTAGTCTGTAGTTTTTATTAAATGATACATACCTGGATATGCTTGGCTTATTCAAGAACATGAGAGAAAGTAAATCTTAAATCTTTCTCACTGATTCATTTCTTTGCCAAACATGAATTGATGGAAAGCCCTGTGTTAGAGATGGTCATCCTAGCCTAAGCAGGACACATCCCTCCCAGAGATTGGCAGGGTCTAGAAGCAGCAATCAGATGAAGAGATGGTGAGGCATCCTCTAGGAGCCATTAGGGTAAAAGAACAGGTGAGAAGGTGGGGTTCCAGGGAAGAGCAGGTAAGTATAAATACCCTGAGCCAAGATGGCTTAAGGCTTTAGGAAACCACAGTCGCTTATGTAGAGGTTCATTTTCAGTTATGCTGGGTGGTGGCAGGGGCCTAACTCTCAAAAGCTGTGTCTCACAATTGATAGAGGGTTTCCCTGGTGGATCAGATGGTAAAGAATCCACCTGCAATGCGGGAGACCTGGGTTACATCTCTGGGTCAGGAAGATCCTCTGGAGGAGGGTATGGCAACCCACTCCTGTTTTCTGGCCTGAAGAATCTCCATGGTCAGAGGAGCCTGGCAGGCTATACAGTCCATGGGGTCACAAAGAGTCAGTCATAACTGAGTGACTAAGCACAAGCACAATTGAGAGAAAAGTCTGGAATGGAGGTGTTCTTAGCAGTTCCTTTTGGATCCTGGATAAATCAGAGGGCAATCCCTACCCAAGCAAGTATGGAAAGTGTCCTGAATTCTTGTAAAACCCCAGTGTACGAACTAGGCGTTCTATACAAACCGTCAGCAAGTATTTCCTGACAAATAGGATAATACTCTCTGGAAGTGATGCCAAGAAGTTGCTAGGCTGGCATTCTTTTCCCTGGCCTGAGAGACCCAGAGACTTCTACATTAAGATGACATTGTAATTAGGTTATCTTGAGTGCACTGTGGCCAAATCTAAACAAGAACTAGATTTTCGATCAGGGGAAAATGAGAATACCATTTTTGGATGGGAGAACAGCTGGGATGGAAAAAAAAGACTTAGTCTTTGACTTGAATTCTAAGACTTTTGAGTGGAATTCATCTCCGGAAGACTAACCCACACCTGATTTAATTACATATTATCCAAGGGGAATTTTATGGAATTTTGTTTACAAAGCAGCATATTTGACTTATTAAGTCTCTGATGTCTTACAGCACTATATATTCTGAGAGGTGTTCAGTTCAGTCGCTCAGTTGTGTCCGACTCTTTGCGACCCCATGGACTGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGCTTACTCAAATTCATGTCCATTGAATCAGTGATAAATCCAC TCONS_00246623 s 5' 73915 TCONS_00246623 s 5' 77003 EMBV3_12718 TGGCAGCTGTGGGTATTTTCTGCTCCACTGCTCAGTCTGTTAGGATGGTGCTTCCTCGTT Gene BVT0102_129377 + 0 NULL GK000013.2:43422284-43493568 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24081 CGAGATTCTTATAGAGCCCCAGTTTGACGTTCCTGAGCCATACAGCAAATCCCCATTGGC Gene BVT0102_122528 - 1 EMBV3_36907 GK000006.2:101484303-102500169 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05428 GCGAGCCGTGAGAAGCTACAACTCCAGAGCGCAGCTGACCTCCTGTGACCTCTGCGGGGA Gene GeneID:534043|CD109:XM_002690022:10_cdna Constitutive 0 NULL GeneID:534043 9 GENE CD109 NULL CD109 molecule EMBV3_38383 AGTCTTGTGGTAATGCTGTAGCCGCTTCTTGTTGCTACTGTGGAGAGACTGGCTGTTGTG Gene BVT0102_031493 + 0 NULL GK000007.2:76563513-77249996 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217771 1 XLOC_131573 NonCoding TCONS_00217771 XLOC_131573 NonCoding NonCoding - 7:76853994-76879875 - TSS162092 856 1 TCONS_00217771_1 65 0.75 3 0.967040185471406 0.000381468789487789 0.00261775537746609 0.00122161346208147 0.000184321413123168 0 1.67151807652588e-05 0.000129441782231991 0.000165833527413343 0.000175131922355658 2.40332624479206e-06 0 0 0.000355867112565144 0.000126392462553511 0 0 0 0 0.00196027583674633 0.00207509843693531 0.000226969968871604 0 0 0 0.000590862119428227 0.000230459450736448 0.000410688000292166 0 0 0 XR_229357.1 LOC101909969 PREDICTED: Bos taurus uncharacterized LOC101909969 (LOC101909969), 2e-22 111 92.11 0.0876168224299065 0 noncoding 0 0 0 0 -0.373332654964711 0.138613030897854 0.0466666116583695 0.489760704674385 GATCACGTTCCCATGATGCAAGATTTACTGGAGCGACACCTGGTAACCTGAGGATGATTGGCGTCTTCAGCCTTTGAAGCTGAGGCTCACAACAGCCAGTCTCTCCACAGTAGCAACAAGAAGCGGCTACAGCATTACCACAAGACTATGGTTGATACAGAGCCCCTGTTTGAGTTTCCTGAGCCATCAGCGAATTCCCGTTGGCTGTCTATTTTACATATGGCCAGTATCTAGTTTGCTGTCTTTTAGTAGCTGCAGCCTGATTTTGAGGATTAACCACCCCTCCCACAGTCTAAGATTTGGATGAGACTGACCTGGCGTGCTGCGGTTCATGGGGTCACCAAGAGTCAGACACGACTGAGCAACTGATCCGATCTGATCTGATCTGACCTGTCTTGGCACTGTGGTTAGACAGACAACCCAAGTCTGGCCATATGTCATCCCCTCCCACACCGACTGGTGCAGGAATCATCAGTGTGACATAAGTCAGACCAGTTGGATGTAATCTAGGAAAGGCTGGGACAGAGGAGCTTCTGTTTTGCTACTCGTGCAGAGCAAGGACTTTTAGAGCTGTCTGTGGCATCCTAGGAGAGAGACTACCCGAAGATGATGCCAACCCAGGAAAGCAGACTTGAGAGACAGAGAGGAACACACTTCAGACTACATCACTGTAAACAAGTTCTCCAAGTGATTTTGTGCAGGTGGTCCAAGGCTCCACTTTGGAAAACGTTCTTTTATACTTCAACCTTAGTCAAAGGCTACCTAGAAAAACACCCCAAAAGAATCAGAGACCCATTTTTGTAACATCCCCTGATACTTGCCTATTGCTCATATACATTAAACTCATATTTTCATT TCONS_00217772 TCONS_00217773 s 3' 78219 TCONS_00217772 TCONS_00217773 s 3' 52972 EMBV3_27803 TCACACCGGCATATCTATCATCATCCGCAGCTTCTGCATGGTCTTCCCACTGCCTTTCCT Gene GeneID:617817|LOC617817:XM_002693270:32_cdna Constitutive 0 NULL GeneID:617817 15 GENE LOC617817 NULL similar to olfactory receptor Olr144 EMBV3_17426 TTCTCAGGAACCCAGGCTCATCCAGCATGGAATTACAAGTGACCCCATCATCTGTGTCTG Gene BVT0102_102695 + 0 NULL GK000026.2:13134190-13270021 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150077 1 XLOC_091804 NonCoding TCONS_00150077 XLOC_091804 NonCoding NonCoding - 26:13248920-13254929 - TSS112513 3220 7 TCONS_00150077_7 49 0.205590062111801 2 0.464380825565912 0.000959160289636772 0.000494620909525322 0.000523052716944825 0.000660053030509793 0.00103420111780612 0.000173298587673825 0.000603092668523179 0.000227772238690643 0.00121292425963865 0.000102223666764928 0 0 0.000317670727512178 0.000151930179207331 3.35206193768087e-05 0 0 0 0.00160399456641183 0.000726960045562065 0.000292730708019107 0 0 0 0.00125874500563819 0.000874118485276621 0.000313579733576273 0 0 1.86715641813947e-06 XM_588302.5 SASH1 PREDICTED: Bos taurus SAM and SH3 domain containing 1 (SASH1), 7e-123 446 94.46 0.0894409937888199 0 noncoding 0 0 0 0 0.0943503736095202 0.538038523688935 0.0265945956686447 0.567195054059122 GAATGAGACATGGCAAGCAGAGACGGCGAGCAGCCAGGAAGAACCAGGCAAGCTCCAGTGAATGGGGTTCAGCAGTGAGGTCTGGAAGAGATGATGGAGAAGGCAAAAGGCCAAGAGTGAAACTCCATAGAGAAGCTGGGTGAAGAACACGTGATTCTCAAATTCAAATCTGTTGTCAGTAAAAGCTGGAGAGAAACACCTGGCTTCAAGCAAGCCAGTGCCTCAGCTTCACAGAGAACCTCCTGGAAGGGGGCCAAATGAGAACTGTCTGTGAGGGGTGACGAGGCTCCAGTCCATAAGAGAATGCAACACGCAGTGAGAGCCTAAAACCTCTGAAGAAGATACCTCGTCCTCCATTACTCTCTAAACTCTGTGTGCGAGACGCGGTGGGGCCTGGTGTCAGTGACAGACAGCTGAGCAGAGGCTGGCCGCATTATCAGCAACTCTCTGAATGTGCTTCCCCAAAAGAATATTCCCATCCCGGCAAAGGAAGCCAAGATCCAGACACTCATAAAGAAAATCAATGATGGACTAAGGGGAACCGTCTCCAGAAAGGTCTAAGAAAAGGATGTGGTCGGAAGACACTGACTGACTGGCAGACACTCCTGCCTCTGAGGAGGGGAGCCCGCAGTAAAGGATCTCCCGCTCTCACTGAGGGAGCGAGTACTACGGTGGTAATCACTGCAGCCAGGAAGCTGTGCTGGCTGTCTGGACCAGAACTGCAGCCAATGCCAGGATGATGGAGGCAACAGAATCCCCCCAGGAGACTCAGGGTGTCCAGTGAGGCGTGGTCCATGCATGACAGAAGCCTCCCCACAGACACAGATGATGGGGTCACTTGTAATTCCATGCTGGATGAGCCTGGGTTCCTGAGAAACAAGGGCGAGTGAGTGCCGCCTCCTTGTTCCCTGCCTGCAGTTTTCCAGTGTGTTGTGCCCCAGGCATTCAGAGGAATGATGTGTTAAATGAAAATTAACAGTGAGATTAGTACACCAGGAAAAATCACACATCTGTGATTGTAGTACACTCCGCTCTTTCTGCTCCCCCGGCTCTGGACTGGTGGGCTGTAGATGACACAGAAAGGTGTCTGTTTTGGGTTGGGATACAGATGCTTATGTTTTAAAAGGGGAAAACATGGGGCTTCCTTGACAGTCCAGTTGTTAAGACTTTGCCTCCTGACGCAGGAGATGTGGGGTTGATTCCTGGTCAGGGAGCTAAGATTCCCCATATCTCACTGCCAAAAAACCAAAACAAAACAGAAGCAATATTATAACAAATTCAACAAAGACTTTAAATGGTCCACATTTTTTAAAATATCTTTAAAATATTTTAAAAATAAAAAGGGAAAGATGTTTCATAAGTTATCATTCATCCCAGATAAGAAGATGAAAATGTCATTCATATTACCAAATGATTTCCCTTATGAAATGGTAAAAATGGCCTCAACAGCTTCTAATGGGACCATCTTCAGCTGAACAGTGTGAAGATGTGAGTGAAGAGTCATTTAGTTTGCTTCCTGGCTGGATTTCCCTCTTTAGATACAGATCGCCTTAGGAGCTGCTGTCTTCTAACTATGATGACTCCGAACTGTTGAGTATTTTAAGCCAAAGCAGTTATTCCCACCTCCCCACCCAAAACATACAATTCTTAACTTGAACACTATTGTTTTGTATTTTTCTAAGTATCTTGAGACTTCAGTGGTTTGGTTATGGGCTAAAAATACAAGGCAGCTGCAGTAGCCTTTCCACTTGTAACTGTTTTATATCTTTCTGTTGCTAAAAAAACAAAAAACAGAAATAGTTTAAGGCTGCTTCCCAATCATAACTAAATATGTTGGATTTACAGTGTGTATATAAAATAATTCATCAACTGTTGTATTTGGGTTTCCCTGGCAGCTTGGACCGTAAATAGTAAAGAATCTCCCTGCAATGCAGGAGACCTGGGTCGGGAAGATCCCCTGGAGAAGGGAATGGCTACTGACTCCAGTATTCTTGCCTGGAGAATTCCATGTACAGAAAAGCCTAGTGGGCTACAGTCCATTGGATCTCAAATATGTTGCATTTAAAATGTACATATAAAGTAATTCCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGACGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAAGAGTCAGACACGACTAAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGGAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATAGGGGAGCCTGGTAGGCTACCGTCTGTGGGGTCACACAGAGTCGGACACGACTGAAGTGACTTAGCATAGCATAGCATAGCATAAAGTAATTCATCAACTATTGTATTTAGGTGATTATATTCATTGCATGCAAGTTATTAACATTCTGAGCTCAAAGTAGGCTTAAGTCAAAAATGGTGATTTCTTCTGCATGATTCATTTTAATTTTTTTCTGTGCTACCTAAATGTATAAGCAGCATAGCAACTGAGCCACATTCTGACTCTTGCAATATCTTCTCCACAAGAAGCATTGCCTCTACAAGAGTCTCTGAGGACAGGAGAATACTGCTGTGTCAGGGTTCACCTCAGTGTTTAAAACAAATGTTAACAAAAATGGTAACGCAGGGATGCATGGAGCTAACATCTGAAACTATACATCCTCTGAAAGTTTATCAATGCTACTAAAAAGCAGCTTATCCAAAGAGGCACTGATAGAGCAAACAGCTAGCAGAAATAAACTAGTTTTGTTTTTTCTAACATTTATTGAATACGTATTCAGAGCAAGGCCAGGGCCTTTCACATGAGAGTTTCACAAAAGCACTATGACAACATTATTTTTAATTTATAGTTATCTGAAGGGTTTAGAAGTTATTAACTTAACCAAGGTCTCTCTGCTTGGAAATGGAAGATGCCAGCCAACTTCCAGGCTTCTTTTATATGAGACAGGAATAAGGAACTCTAAGGTGGTTTAAGGAATAAATAATGGTATAATGTGCTTTCTGTTACATGTAGCTGAAATTAGCTATAACTGTTATATTTACCCAATAACAAGGAATTTCTGATACTAATGTGGTTCAAGCCCCAATCCAAACACTAGGGTAATATGCCCTAAAGTGAAAGTGAAGTGAAAGTCACTCAGTTGTGTCCAACTCTTTGTGACTCATGGAATTCTCTAG TCONS_00151472 r 3' 15093 TCONS_00151472 r 3' 21101 EMBV3_32281 CTCTGAGCTGGCTAGAAATGCTGGGGGAAAGAAAAGGCAAGGAGGCATGGAAAGGAGATA Gene GeneID:538821|COQ10A:NM_001076130:16_cdna Constitutive 1 NULL GeneID:538821 5 GENE COQ10A MGC140271 coenzyme Q10 homolog A (S. cerevisiae) EMBV3_29829 CGATTGAGGACACCCATGAACCTTCCCAAAGGATGGTTTACATGGCCGGACTCGTTTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24694 GGAGTAAAGTCAACTGGGCAGAGGATCCTGCCCTTAAGGAAACTGTTCTGCAGCTTGAGA Gene GeneID:505284|CENPH:NM_001034236:72_cdna Constitutive 0 NULL GeneID:505284 20 GENE CENPH MGC127326 centromere protein H EMBV3_14922 CCCGAGGTTACAGTTTCCATCATAAAGGAGCTAAATCGAAGAGGAGTCCTTGCAAATGCC Gene GeneID:526343|UTP15:NM_001101128:124_cdna UTR3_Alt 2 NULL GeneID:526343 20 GENE UTP15 NULL UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) EMBV3_34419 CTCTCTCTGCCTGCTTCACCCCTTCTGCCGGTTCAGGGTTTGCTCAGTGCAAGAAGAGGT Gene GeneID:511515|AATK:XM_002707765:299_cdna Constitutive 0 NULL GeneID:511515 19 GENE AATK NULL apoptosis-associated tyrosine kinase EMBV3_19444 CCATCTCTTCTTGTAACACTCCATGTTCTGTGGACTTTTCACTACCATTAGTGCCTGCTC Gene GeneID:533491|RASA2:XM_002685039:103_cdna Constitutive 0 NULL GeneID:533491 1 GENE RASA2 NULL RAS p21 protein activator 2 EMBV3_20460 GAAGGATAGAGTATACAGGCCATTTAGTCCTAAGCGATGGCACCATGGTTGGTAGAGTCC Gene BVT0101_011029 + 0 NULL GK000004.2:86743207-87042407 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24292 GTATTCTGGTCAAGTTCTTGTGCTGTACTTTGTGCGTAGAAATTGTGTTGTGTTGTGTTG Gene GeneID:506924|FGF13:NM_001098892:14_cdna Constitutive 0 NULL GeneID:506924 X GENE FGF13 MGC159655 fibroblast growth factor 13 EMBV3_07892 GCAGAGTTTCGCACCAGGAAAGAAGCAGCTTGGGCTATAACTAATGCAACATCAGGAGGC Gene GeneID:783596|KPNA5:XM_002690097:88_cdna Constitutive 0 NULL GeneID:783596 9 GENE KPNA5 NULL karyopherin alpha 5 (importin alpha 6) EMBV3_21563 CATCAGAGAATCTGTGACCATTAGGGCTGTCACGTAGAAATCCAAAATCATTCAGAGGCC Gene GeneID:768227|DNAJC24:NM_001078102:71_cdna UTR3_Alt 2 NULL GeneID:768227 15 GENE DNAJC24 DPH4 MGC142938 ZCSL3 DnaJ (Hsp40) homolog, subfamily C, member 24 EMBV3_20138 CTGTCTGAATAGCAAACACTTGCTGGGGAAGGAGGCTACTAAACAGAGACACCTGCGCCT Gene GeneID:513260|FASTKD3:NM_001024528:17_cdna Constitutive 0 NULL GeneID:513260 20 GENE FASTKD3 MGC5297 FAST kinase domains 3 EMBV3_00194 CCCTTAGTGTTTAGCACAGTATTCAGACAAAAGGTGGAGAGGAAGTCTGTGAATCTCCGC Gene GeneID:100300920|LOC100300920:XM_002694210:58_cdna Constitutive 0 NULL GeneID:100300920 16 GENE LOC100300920 NULL hypothetical protein LOC100300920 EMBV3_29798 GGGCAGGGGAAAAGAATTACCCTCCCCCCCACTTTTTCTAGTTTGAAATGTCTATTGTAC Gene BVT0101_006385 + 0 NULL GK000003.2:345807-402031 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171676 TCONS_00171677 TCONS_00171679 TCONS_00171674 TCONS_00171675 TCONS_00171680 TCONS_00171678 1 XLOC_103895 Coding TCONS_00171680 XLOC_103895 Coding Coding TIPRL 3:399462-473253 j TSS128017 4553 1 TCONS_00171680_4 272 0.138370305293213 8 0.938406288114921 0.00259955637669648 0.00187216563119758 0.00203974842471629 0.00111956906620364 0.00151968686896594 0.000624878474486446 0.000750462126265597 0.00157082608609586 0.00145510193288167 0.000132495704448352 4.74466290561223e-06 3.39279269858393e-05 5.20653219635418e-05 0.000398129155656475 0.000670702342281864 0.00253618634445866 0.00091540980871914 0.00199139048467151 0.000988141662147302 0.00160193080466763 0.000588400423389409 0.00136570131340535 0.000923965572128982 0.00123665630462887 0.00171049790922283 0.00168245289153916 0.00150261702014974 0.000180452514440279 7.65846935354528e-05 0.000195505559568831 XM_005203402.1 TIPRL PREDICTED: Bos taurus TIP41, TOR signaling pathway regulator-like (S. cerevisiae) (TIPRL), transcript variant X1, mRNA. 0.0 5335 100.00 0.649461893257193 NM_152902.3 TIPRL Homo sapiens TIP41, TOR signaling pathway regulator-like (S. cerevisiae) (TIPRL), transcript variant 1, mRNA. 0.0 2282 76.62 0.63738194596969 TCONS_00171680_4 sp|Q8BH58|TIPRL_MOUSE TIPRL_MOUSE TIP41-like protein; 0.0 526 97.43 0.996323529411765 1 coding 1 1 1 1 0.00666923086694384 0.972710202222685 -0.065173438473429 0.427239805580752 GTGTGTTTGTGACTTTGGATTCTACAATACAGGGACTGGGGAATCTATACTTTTAGAAAAGTTCCAGGTTGACTCTGAAGTGGGACAGGTTTGAGTATGACAGTTTCACGCATATAGAACAGTAAGAGTAAAGTCTCAGTAGTAGGGAGGAGTGCAGGTGAGTAGACCTGAGAGGAGTTGCTGGAAATGAAGCCGGAAAGAAAGATTTGGGAGATCCTCTAACATAAAAGCATATCATTTTGAGGCAGCTGAAACCAAATCATTAGTTAAGTGGTTTACCAAGGATTGGGCTTCCCTGGCGGCTCAGGGGTAAAGAATCCACCTGCAAAGCAGCAGACGAGGGTTCAATCCCTGGGTCAGGAAGATCTCCTGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGGAAATCTCATGGACAGAGGAGCCAGGCAGGCTACATACACTCCATAGGGTCCTAAAAGAGTGGGACAACACTTAGCGACTAAACAACAATTGCCCAGCATGCACAGAACAGCATTGCAACGGTGGATGTAGCACCAGATCTCCAGTGTTATTTCCACTGTAACAGAAGCTTAGGTAATAGCTAGATCAGGACAGTCTTGAAATGTCTGAAGGATGAAATTTTAAAGGTCCACTTGTCTTGCCGGACTTGATGCTGAACCTCCTAAACTCTAAGTGATTTTAAAACTTTGTCCTCAACGGAAAATTATTGGGCATTTCCTCTACACCAAATCAGTAACACGCAAGGTAGTTCACTGCTTTGCAAGGTCTACAGGGATCACGTCGGATTCTCCAAACTGGGCTTCCCCCGAAGGGGCCAAGATGATGTCATCCAATGATGTGCACGCCCCTAACCACTTCCCCTGCGGCCGAAGCCTCGCCCCTCGGCATTTTCTCCCCACCTTTTTCAGGTGCGTCGTGACGTAAGACGTGGGTCACACAACCTCGGCAACTGGTCCCGGAAGCAAAAAGTCGAGGGACGGAGAAGGAGGCGGAAAGGAGGGCTTGCGTCCGTGTCGCCGGGCATGGTAACGGCTAGGCTGCTGGGCTGGAGGGAGGAGGAGGGACCGGTATCTGCCGCCGCTACCGCTGCCGCCGGTGCTCCAACCTGTTCCGTGTGGCCCACGCTGGCCTTGCCGCGGCCATGATGATCCACGGCTTCCAGAGTAGCCACCAGGACTTCTCCTTCGGGCCCTGGAAGCTAACGGCATCCAAGACCCACATCATGAAGTCGGCGGATGTGGAGAAGTTAGCTGATGAATTGCATATGCCGTCTCTCCCCGAAATGATGTTTGGAGACAATGTTTTAAGAATCCAGCATGGCTCTGGCTTTGGAATTGAGTTCAATGCTACAGATGCATTAAGATGTGTGAACAACTACCAAGGAATGCTTAAAGTAGCCTGTGCTGAAGAGTGGCAGGAAAGCAGGACGGAGGGCGAACACTCTAAAGAGGTTATTAAACCGTATGATTGGACCTATACAACGGATTATAAGGGAACATTACTTGGAGAATCACTTAAGTTAAAGGTTGTACCTACAACAGATCATATAGATACAGAGAAATTGAAAGCCAGAGAACAGATTAAGTTTTTCGAAGAAGTTCTCCTATTTGAGGATGAACTTCATGATCATGGAGTTTCAAGCCTGAGTGTGAAAATTAGAGTAATGCCTTCTAGCTTTTTCTTGCTGCTGCGATTTTTCTTGAGAATTGATGGGGTCCTTATTAGAATGAATGACACAAGACTTTACCATGAGGCTGACAAGACCTACATGTTACGAGAATATACATCACGAGAGAGCAAAATTGCTAATTTAATGCATGTTTCACCTTCCCTCTTCACGGAACCTAATGAAATATCACAGTATTTACCGATAAAGGAGGCAGTTTGTGAGAAGCTAATATTTCCAGAAAGAATTGATCCTAACCCTGCAGACTCAAAAGAATGTACACCTGTGGAATAGAATGTGTTATAACATATACTTACTGTGGAATCTGATTGGCTATTTGGAGGGGGGTATTTTTATTTTGAGAATTAATTGCCTTGTCTATGTGCAGATTTTCTGTAACCTTAAAGGAAAAGAAAAAATAAAGGATTGTTGCAGGCAGATTCCACTCAACTGCTGTTTGTACCCTGTCTTCAAATTCATATTCCAGGAATTTATATTCTCTGGAATTAAGTTCAGATTTCTAAATTGTAATGAAGCAGAGTCTCACTAAGAAGAAGGTGATGTGTGTATGTCTCTGAAGGAGTGAGCACAACCTGCATCTATCATGAAACGCTATCTTCTACCATGAGGAGAAGTTGTTTTAAATCACTCAATCATCGCACCTTGTGGCTTTCATTGGATTCCTAATCATGCACATTGATACAGTTTAGTGGCTCTTTACCTTGTTTTTTACCTCCTAGGAAATTGATCTGTGCCCAGGAATTAAAAAAAAAAAAAAATTACCCCTTAAATTTTAAATTGGCTTTTGAAGTTTAAAGAAAGATACAGAACCAAATAAACTATATTTTTGGATAACGTAAGGTGTTATGTCAATGAAAACACATGAACGTGGTTTGCCACTAACAGCTAGGGTGTCAGAGCTGTCTCCTTCCATCTTTAGGTGCTTTTTCTGTATTTGTTACTATTTGTACTGACATGTATTTTACTTCCATCTTCCATTGGATATTGAATTTGATATTAGTCCTAAAAAGTTTGAATTAAAGTGGATTATTTTAAGCAAACATTACATCAAACCCTAAAACAATCAGATTAATTTTCTGCTTAAAATATTTGAAGGATAGCTGTGAAGGACGAGGAGGCTTATTTTAAAGTCTGAAAGCCAGTTTTTCGTTTTTTTTAAGATTCATGTTTTTAACATTACAGGGGATCCAGGAAAGTGTAATTAATTAGGACAAAACCTCAGTAGTACGGAAAGTACACAGAGGTAAATTAAAAATCCATTTGGTTATTTTGATGACCTTTAAATATTTTATATTCTTTTCTGCCTTTCTAAATGATCTCCATAAAGTAGAAAGTAGTTATAAAGCACCAAGTAAGAAATTATTTTAAATGGATTTTAAAAAATATTTTATTTATAGGGCAGGGGAAAAGAATTACCCTCCCCCCCACTTTTTCTAGTTTGAAATGTCTATTGTACATATTTCCACTTGATGCATAAGTCATTAAAGAAGAATATTTAATTTTAACTATTAGAAAAACTCTTCAGGTATTGGCCTGAAGATAAATTTTAGTGAAACAAATACAATTGGATATTCATCATTGCTCCTACTCTGGTGTAGTGTTGTGTGTATTTTTTTTTTTTTTTGCTTATTTTATTAGCTAAATTTAGTCACAGATAATTTGTGTATTTGTGTTCTGCTTCATCAATCTTCAAGGTGTAAAAGAATCAGGATTTTTTTGGCTATAAGAAAACACATGACATACTCACTGTATATTAAATATATCTGTACTTAGTGTTTCCTCCGAGGACAGAAAAGTGTATGTTTTGTACTCTGCTTTCTGTTTATTTGCCATGCAGATTTGAATAGAACAGACTCTTTAGCTATAAAAATTATAAAAAATGGAAAGCGTAAGAATATTCATGAGTTGAATTAGTTGAGGTTTCTGGGTAACAACATATTATACATATATTTTTAACTTAATTCAGATATCTTAGTCACAAAATAAGTCTTAGATTACTTATTTTGAGAATCCATTATTAAAAATTGTAGAATTGATCTTTTTATAGAGGGTGGGAGGTGGGTAGGATGAGGTGAATGGATAAACTTATAAAAACCTCACTAGCTTATTCCTTGGAGAATACCAAGAAAACTTGTATTTGCCCATTGCTTAACAAGACCAATACCATTTTATATTTATTGTTCCAAGTGTCTTTTTGTAAGAGGAGAATAAACAATAAGTAATTGCCGATCTGTGTTTTGCTATTTCATCTGATTTGATTTTTCTTGAAACTTAATTAAAAATGGTTTGGTGTATCTTTCTTGTTTGTGCTTTATATATATATATTTTTTATATATTTATTTATTTGACTGCGTTGGGTCTTAGTTCTGTGGCACTTGGGCTTCGGAGTGTGTGGGCTTTAGTAGCTGTGGCATGCGGCCTTAGTAGCTCTAAGACCTGTGAGGTCTCAGTTTCCCGACCAGGGATCAAACCTGTCTGTGGCTCCCGCAATGCAAGGCAGAGTCTTAACCACTAGATCATCAGGGAAGTACCATGCTATAAATGTTTGTGGTAATGTATCATTCCATTTCAAGTACTATATGTCCTATATGGTGCTAGATACAGGGATCACAATAATGAAGAAGATACTCAGTCAGCCCTCTGCTGGTTCGACATCTGCAGATACAGCCAACCATGGATCAAAAATACTGAAAAAGAATTTCCAAAAAGCAAACCTTGAATTTGTTGTGTACCTGCCAGCTATTTACGTAGCATTTACGTTGTACTTAAAACTATCTACATAGCCTTTACATATTATAAGTATTTAGAGATGACTTAAAGTGTATGGGAAGATATGTGTAGATTATATGTAAATACAC EMBV3_11899 TGACCACTTCACCTGTGATTCTGCTCCTTTACTGCAAATCTCCTGCACAGACACCAGCAC Gene GeneID:787797|LOC787797:XM_002687464:289_cdna Constitutive 0 NULL GeneID:787797 5 GENE LOC787797 NULL similar to Olfactory receptor 6C76 EMBV3_39777 TGCATTGGGTTTCTGCTGATGCTGTTGCCTGAGGAGTGGGACGAAATTACCCTGAGATTC Gene GeneID:516757|SLC35F4:XM_002690916:208_cdna Constitutive 0 NULL GeneID:516757 10 GENE SLC35F4 NULL solute carrier family 35, member F4 EMBV3_11961 GGGAGGTTACATTCCTGTTCAAGTTAGAGAAATGCTGGGTACAGACAGAACTTCAGGAGC Gene BVT0102_393844 - 0 NULL GK000003.2:112923597-112931474 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174781 TCONS_00174782 TCONS_00174783 TCONS_00174784 1 XLOC_104689 Coding TCONS_00174781 XLOC_104689 Coding Coding ZSCAN20 3:112926342-112936534 j TSS129628 7167 1 TCONS_00174781_2 475 0.0440909725129064 3 0.297026788342655 0.0022694444310411 0.00137561214381874 0.00149133232814762 0.00221579973817254 0.00141494198024196 0.00036280186448411 0.00156823261984724 0.000809659897285254 0.00283257979299887 0.000905670743490384 1.90047990097195e-05 9.35298350742049e-06 0.000276690532289347 0.000531512016728317 0.00116637689541503 0.000437073163164855 1.15819234192299e-05 6.60293543979449e-05 0.00137780814540273 0.00200478982462996 0.00131457625932113 0.000194061865575055 7.8428513537464e-05 0.000106042022793551 0.00278472180503312 0.00166321750365315 0.00141890605516531 0.000117294679000518 0.000142450444198654 0.000106537534592014 XM_581801.6 ZSCAN20 PREDICTED: Bos taurus zinc finger and SCAN domain containing 20 (ZSCAN20), transcript variant X1, mRNA. 0.0 1.290e+04 99.99 0.998046602483605 XM_005271171.1 ZSCAN20 PREDICTED: Homo sapiens zinc finger and SCAN domain containing 20 (ZSCAN20), transcript variant X1, mRNA. 0.0 2551 80.75 0.38356355518348 TCONS_00174781_2 sp|P17040|ZSC20_HUMAN ZSC20_HUMAN Zinc finger and SCAN domain-containing protein 20; 0.0 790 82.53 0.997894736842105 6 coding 0 0 0 0 -0.0551335854975609 0.714600162043065 0.00339470420590064 0.952337112833264 GTCGTATTGAGGTGTGCACTGGGGCTACGAGGAGACCAAGGCCTTCCTGACCATTCTCAGTGAGTCCCCATTCTCTGAGAAGCTTCGCACCTGTCACCAGAACAGCCAGGTGTACCGGGCCATTGCAGAGCGGCTGTGTGCACAGGGCTTCCTGAGGACCCTGGAGCAGTGTCGTTACAGATTCAAAAACCTCCTTCGAAGCTACCGAAAAGCCAAGAGCAGCCACCCACCTGGGACCTGCCCCTTCTATGAGGAGCTGGACTCGCTGATGAGGGCTAGGACTGCGGTTAGAGACATGGGGACCGGCGGGGAGGCAGCAGGTCTCCCTACTTCTGATCAGAGCAGTACCGAGGTTGTCAGCCAGGAGGCTTGGGATGAGATGGCAGGTGAAGATGTCATCAGACCTCCAACCCCAAGTCCTAAAACCTCAGACACTGGTTTTGAGATGAGGTGTGAGGATGAAGACCAGATTCCAGAGGACGACCTTTTTTGCAATTTGCCCAGAGCCTTATCAAAATGCACTGCTGGGGATGATTGCTACCCTCATGACTCGGGGGAAGACAGTGAAAATGAAAATGAAGGTAAAGGACAGTGGGGAGATCCATCCCAGGAGCAGTGGGAAGAGTGTTCTTCTGAAGAGGACTTGGAAAAGCTCATCGACCACCAAGGCCTGTACCTCGCAGAGAAGCCCTACAAGTGTGACATGTGCGTGAAAACCTTCAGCCGGAATTCACAGTTAACCACCCACCAGCGGATACACACAGGTGAGAAGCCCTACAAATGCCTCGAGTGCGGGAAAAGCTTTAGTGACCGCTCCAACTTCAACACCCATCAGAGAATCCACACTGGAGAGAAGCCCTACGAATGCCTTGAATGTGGGAAAAGCTTCAGCGACCTCTCCAATCTTATCACCCACCAGAGAACGCACATGAAAGTAAAGCCCTATAAATGTGAAGAATGTTGGGAAAGCTTTATCCAGAGCTCAGACCTCCTGAAACATCAGGGAATCCACTTGGGAGGAAATTCTGACCACTGTCGTGAGCCTGGGGAAAACTCTGGCCAGAGCCCGTCTTTCAGTGCTCACTGGAGGAACTCCACCGAAGGGACAAATCCTGAGCAACCTCACAGTGCCAGTAAGAATGCGAATTCGCCTGGACCACAAAGCACCCATGCAGGGGAAAAACTGTATCAGTGTTCTGAATGTGGAAGAAGCTTCTCTAAAAGTTCTGCCCTCATCAGTCACCAAAGAATCCATACGGGAGAGAAACCATATGAGTGTGCTGAGTGTGGGAAAAGCTTCAGTAAGAGCTCCACGCTGGCCAACCACCAGCGGACCCACACTGGGGAGAAGCCGTACGAGTGCATGGACTGTGGGAAATGCTTTGGGGAGCGTTCCAAGCTCATCACACACCAGAGGGTGCACACGGGAGAGAAGCCCTACAAATGCCTCGAGTGTGGAAAGTTCTTCCGTGACCGTTCCAACCTCATTACCCACCAGAGGATCCACACGGGAGAAAAGCCTTATAAATGCAGAGAGTGTGGGAAATGCTTCAACCAGAGCTCCAGTCTCATTATTCACCAGCGAATCCACACCGGGGAGAAACCCTACAAGTGTACAGAGTGTGGCAAAGATTTCAACAACAGCTCCCACTTCAGTGCCCACCGGAGAACCCATGCAGGAGGGAAGGCCTCATAGGAAACACTGCCCCCAACAGCAAAAGAGAGAGAAAGCTATATCGAAATCTTCCAAGATCCTAAGATGTATGCTAGAAAGAAACTGTCCCAATTTTTAAGCTTGGTGTGTACCCAGGGAGGTTATTCATGGTACCATCGAGGTAATTTGGAAGTGAATTACAAACACTTAGGATCCAGATTTGAAGGCACTTTCTTTTAAGTATAATGTGTTTTTCTCCTGCAGAAAAAAATCCCACATAATCCTCAGGCTGTCCTTACATTTGCTGTCATGTGAGAGCTTTATCAGTCTTGGAGCCAGACTGGTAACTAAGGAGATTAGAGGTAAATTGTTGGCCCTGAGCAGTGATTTGAGACCTTCCTGTGCCTTCACACTGTCCCCGGGTACACATGCCTCATCCAGGTACATTGGAAAATTCTCACCCATGGCAGTTTTCCACTGGGGCATAACAACCTGGGAGAATTTTGAGACCCTCCAGTGAGAGGGGACATAATTGAGAATCAGTGACCTAGAGCAGGGGGTGAGCTTATCAAAGGATAGGAACAACTGTGACATCATTAGTAGATCATTATTAATAGTAGCAAAAAAGTAGCCAGTGTTCCCTGAGCTTTTCAGTAGGCTCTGAGCTAAGCACTTTATATACATCTTCTCATCCACTCACAGCTGCCCCAGGAGGTACTAATATTTCTCTCATTTCCCGGAAGAGAAGAGTGACTTGCTTGGGTCACACATCTGAAAATGGCAGAGACAGGATTCGGCCACATCTGCCTCTGGGGCCTGAGGTGCTCTCACTGCTACACTGAGTCCCCTTTCCCATCGGGGCAGGTAACTCAGGTGCCAAAGCACTTTGTAGACCATGTTTTCAGTTAAAATTCCCTACGAATTCAATTTTTAACAAATATGGACATAGAGAATCCTAACCGATTGAGGGACTGGGGATGTTCAGAACCGGCAGTGTGCTTTGAGCAAGGTTGAGCTCTTACTGAAGCACTCGATAAGACTGTCCATCTTCACAATAATATGGGTGAGAGAGAGAGGTGAGTTGAGATTGGGAAAAGTAACGTAGTCAAAGGAACGTCTCATCCCCTGGGATACTATCTGGGCTAAGGAAATGGGGTTTTTAAGAACTTCCCTTTTTCTCAGGAGATCATCCCTGCTTCCTGTTAGACTCGGCTCGATTGTAGGTTAAACCATAAGAAACCCGGGCTTCCTGGCCAGTGCTTTCTCACCCCTGTGTGTTTGCCCCCGGCCCCCTCCCTCTTGGCATGGAAGAAGCTTTGTGCCAAGGCTGAGGCAGAGGAGAGTAAAAGAAGTCAGTGGGTGTGGAGCGCTGTGGAGGGGACTTTGAACACTGATCTTGATTCCAGGCTCGTGGTGCACTTTCACTCTGAGCCACCTCATCCCAGGCCTATGCGGCGCTTTCTAAATGTTGCCCTTAAAGAGCTGCTTCCCACAGCAGCAGGTTCCGTCAGAAAGTTTCACACAGGATGGTTTTCAGTTCTCAGCACTTTGACCTCCAGGCTTTCTCCTTAGGAGTGTTTTAAAATGTTAGCCAAGGACTATGGTTTGCAAAGGATTTTGAAGGAGGTTCCTTCTAACACCCACCTATTGATACTTTGCTGCCATGCATACTCTGGCTGTTCATGAACCTGGGAAATGCTATTAAATTAGATAGTAGATATGAGGGACCCTCGGAGAATGGAATTCTGTTCACATGTGAGGCAGCTGGGGAGACGCCGATCATTCCTTAGCCCCTTTCTCAGTTTCCCAAGAACCAGCTCACCTCAGTCACTACCTGTCCCCTTCTTCCTGGCTTACCTTTCCTGCCTCACCTTACCTCTGAGGAGCAGGGCCCATGGGTGAGCCCTGGCTTTGAACCAGCAGATGTCAGTAACTGCGACAATAAGATGATGGGTAAGGTGCCCCCTGAGCCAAGAGAAAGGATCCTGGAGGAGGGGCAGGGACGTCCAGGGAGAGGCCTGGTGGTGTGAACTAGCATGGCTTCAGGTGGGGTGGGACCATAGCTTCTTAGCTACTATTGAGGCTTCAAACGGGAGGTGGGAAGTGGTAGGAGCTCCGGTTGGAGGGATGCATGGGGGCACGGTCACAGAGGACCTGGTGGCTATGTGGAGCTGGGATACCAGGCTGAGGGGTGCCTGGTCAGATGTGTATTGTTGAAACCTAATAGCTGGACGGAGCCTGGACGTGCTGCAGACTGTTGGAACACTATCGCGATATTCCAGTTAGAAGTGAGGCGCTGAGCTAGAGCAGTGGTGACGTTGAAGAGGAGGGGGTTGGATTTGAGAGGTTCCACAGGCAGAGTTGAGGGCAGCCGTGGAAAGCTAGAATGCCTGGGTGGCTGTGGAGCCTGCCCTTGTTCAGGGTGGAGCACAGGAGGAGGTGCAGACAGGGCAGGAGGGCAGAAGAGCAGAAGGTTAATTTGGGACATTTTGAACTTGTACCTAAGGGACACCCAAGAGGCAATACACAGCAGGTCTGAAGCTGGGGGGAGGTGTGTGTGTGGGAGGTTACATTCCTGTTCAAGTTAGAGAAATGCTGGGTACAGACAGAACTTCAGGAGCACTGTGTGTGGAGGAAGATGCTCCTCAAAGGAGGTCTAGACCACTCCCCAGCCCCACCACCTTGCAAGCTCCAGCCACCTTGCAAACACTGCCTCAGTTGCTCCTGACACCTGAATCAATGTGGTTCTGAATTTTCTGGAACCTTCCCTGTGGAAGCCAGGCTGAGCTCTGTAGAAGTGAGATGTAGCCCTCTCCCCCTCAAGTGTCACCCGCCCCCCTGTTCTTGGAAGCATACTGGTGTCTCACGTTCTCGGGACAGTTTTGATGTTTGTGACCTGTGGCTCGTCTCTCTGAACTGTAGCCGTGAAACGGGAGGGCAGTGTGGGCCGGGAGAGAACGTGGCCCAGGGAGACTGCCTCTCCTTGTCCCTGAATCTGCCTCTGGAAGAAGTTCTCATTCGGGTGGCTTCCATGTTTGGGGCCCGCCCCATGCCTCTTCCAGGGTGCCTAGCAACCTCCAGCAGGTCTTGGCTGCTCATAGAAGCCAACAGCTGGTTTGATACACCCTGAGCCTTGTTACCTCAAATCTGCTCTTGGGGAAGTGGATTCACTCTGAGGAATGGGCGGTTTCTCAGCCTGTATGACCGCAGGTCAGACCCTGGTCATGGGAAGTGGAAGCGGTGACTGCCTCCCTGGGACAGTGTCTCCTGTGAGCTGCATCTCCAAACTTGATTTCCATACCCTCCACTGCAGGAAGGGCATTGGCTCCTCAGAGGTGACTGAAAGGCACCACTTAGACGTTCATTCCACAGACTCAGCAGACAGCTTTCTTACAGCCTGAAGGAGTGTAAGGTGACTGGGGTCCTCCTGTGCTGGAAAATGTAGCAGCAGGGACCCCTGGGTTCTCCCTGCCTGGTCCTGTTCTGGGGCCCACAGTGCAGATGGCTTCAGCCTGCAGAGAAGACTTTATTTTTGGTCAGTCTGTGGAGAAGAGTAATGCCTTTTGGGACCACGAGGTTTTGAAGTATGAATGTGGTGACATCTGGAAGGGGTATGGGTGGCAGATGGTCTCAAGCCACCCAGGCTGCCTTGGGTCTCTGTAGCCCAGCCTTGGGGCCCAGGCCTGCGTCTCCATTCACTCTGTTCCACCTGCATGTTGACACTGAGGCCCATGTCCACCCACTGCTGCCTTTTCTGGCCTCTTGGTCCACCACTCAGCATGGGCGATCACGCGCACGTGCGGGCTCACAGTAAGCTGCCTCCGCCCACCGCCAGCACGGTGTGCACACCCAGAGGCACGCTGTCCCTTTTAAGGGCGTTTTCCAGTTGAGCTGTGTCTGCCAAGCGGCCTGGAAGTCTTTCTCTGAATGGGCTCAGAATGAATCATGTGGAACATCCCCTGACCTCAGTTTTGAGCCCATCCTCCCCTCTGGACGTGCCTTCGCCTCCCGCTCTTAGCAGCAGGTGCCCATCTTACGCCCCTGCTGCCGTCTGTCACAAGTGGTTAGTGCCGCCCGTAGTGGGAGGTTAGGAAGGCTTTGCAGGTTCGGTTCGGTTCGGTTCGGGTTGAGCCTTGAGGTCTTCTGCCCATGGCTGCTTCTCTGCACATTCCCGACATCAGTATTAACTCCAGCTTACCTTTAGCACCATTTCCTCTCCCTCTGGTTTCAGGCAGGTCTGGAATTGCCTCCAAATGTGGTTTTCAGGGGGTCAGGTTTCTCATCTTTCCAGGGCTTCCCCCAGCCCACCCTGAGTCTGGATGAAGACCTCAGTGCCCCGTGAGGCCTCGCTCCCCTGATCCCAGTTAGGAACCCTAGTGACCCCCGCCTGCGCCGCTGGTGGCGGGGGAGAGGGCGGAGAGTGTGCGAGCCCCTGTTCTCAGCTGAGCTTAGGCTCCCACTTGTCAAGCTGAGAACCGCTTTGTTCTAGGAGCCCTTTGGTTAAGTCAAGGGCAGAATCCAATCACACCATTTTATGTAAATTGACCGGAATAACGATCCACCTAGATGCTGATTTTCTCATCGAGCCATAGCTAGTGGTTCTGTTTGCACGTGAAGATGATTCTGATCCTGTCTGCCATTACCTTGAACTTCTTTCTAAAGTCGTGTTTATTTTGCACATTTTCACTGTGGGAAAATACTTCATAATCTGGCCATCCAGAGGGTAAGGGCCATGGGAGGGAAGGTGAAGAAAACCAGCCTGCTTCTAGGCTGGTTTTGGACCAGCGGTAGGAGCCCATCTGAGCTCCAGCAAGAGAGTTGCTGCGGGCAAAGGTGGATGCAGCTGTGGTCACCTACCTCTTGAGAGTCTGGGGCTCAGGGAGCCCTCCTTTGGTGCTGGGTGACCAGTATGTGCCTGGTGTCACACCCAGTGTGACAAAGAGGGGGAAGGCCTCCTCTCCTTCCTCCTACATAGGACACGGCTTGGCTTTAGTGCTTTGGGGAATTCGTAGACCAGAGTAACTTTGTGTTTAGAGGCGGCGGAGACCAGCAGGAGATGGGGTCATGGGGGTACCCTGGAGGGGTGGTAAGAGGCTCTGAAGGCAGGGGCCCAGGTCAGAGCACTCTCCATGGACAGCACCCAGAAAGGGCTGTTTAAGGATCACATGCAAAGTCCCCAACCCAACCCTACTTCTGAAGTTGCCTGGACATAGAGGGAGGAGGTGAGGTGACCTGTGCTGAAGGTCACGCTAAACCCATCTGGTATCCTTGGGGGAAGGGCAAACACACATGTTATCTCAGGGACCTTTCATGAACAATTAATTTCTTAGACATTGGTGAGACTGTAGCATTAAAATGGATTACATTTTGACCACTAGGAGGCTCAGAGATTAAGGTCCAAATCTAAAGACAACAGGCTCTTGCAATTTTCCATTTGCTACAATATTGTAAAATAATTGGCCTCCAATTAAAATAAATTAAAAAAATAAAAAATTTTCCATTTGTGCATCAAG EMBV3_37440 TACTGTTATTCTTTTCTGTGAGCCAGGATGCAGCAGAAGGAACAGATTCCCTCACTGAGG Gene GeneID:535588|ABHD5:NM_001076063:167_cdna UTR3_Alt 2 NULL GeneID:535588 22 GENE ABHD5 MGC142582 abhydrolase domain containing 5 EMBV3_05178 GCTCAGTGGTACTGGCTGAGAAATTACAGTCCCCATCCTGTCGTCTGTCCCAAATCACTG Gene BVT0101_026773 + 0 NULL GK000007.2:41806518-41823773 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19183 CCTGTGGAAAACATAATGTACTTACACAAATGTAAGTAAGAGCTGATAGATGCAGAGAAC Gene GeneID:511743|UGT2A3:NM_001098944:29_cdna Constitutive 2 NULL GeneID:511743 6 GENE UGT2A3 MGC139210 UDP glucuronosyltransferase 2 family, polypeptide A3 EMBV3_09402 ACTTCTTCAATTACGTCACAAATATCGACATGCTGGAGGAGTTCGCCTACCTGAGAACTC Gene GeneID:534094|INTS10:NM_001099061:88_cdna Constitutive 2 NULL GeneID:534094 27 GENE INTS10 MGC152159 integrator complex subunit 10 EMBV3_11685 GGGATGCAGTGCTACACAGATGACTAATTTATACACATCCCTGCTTGTGGTCAGAACCTG Gene BVV0102_060855 - 1 EMBV3_15263 GK000016.2:55527456-55553538 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073239 1 XLOC_045005 NonCoding TCONS_00073239 XLOC_045005 NonCoding NonCoding - 16:55545378-55546303 - TSS55083 925 1 TCONS_00073239_1 39 1 0 0 5.43159276679186e-05 0 0 0 0 0 0 0 0 2.47479485667529e-06 0 0 0.000122049799749538 0.000786758271557014 5.71061206786132e-05 0 0 0 0 0 8.02233663009822e-06 4.9589548014109e-05 0 0 0 0 0.000259599137587342 0 0.00117644794300459 0 noncoding 0 0 0 0 -0.0260993369434305 0.82270906822249 0.032108949090163 0.561817251267206 GCAGAAACACTGGGCAATCTCTTTCAGTAGGCTGACCACAAAACACATTCCTCAAACTGAAGTACTCCCGAACAACTTTAGGAAGAAACAATTTACACTGCAGTGAAAAATACAGATAGCTTTGGGCATCCCAGAAAAGTATGAAAAGGGGAATATACTTAGCTAGAATACAGTACTTGAGAGGCGGCCACTAGGGTTAAAAAATAGATATTTTCTCAGGTTCTGGGATGCAGTGCTACACAGATGACTAATTTATACACATCCCTGCTTGTGGTCAGAACCTGTATTTCAGAATAGATGGAAGAATGACGGAGGCAGCATTCCCGCCAGCAAGCATGTGACGCTAGCTAAGGCATTAGGCGCTTGCGCCTCTGGGCCGCTCTCTGTCCCCCTCCCCAGAGCAGCCAACACACCCCCGGAACACTTAACAAACGCACTTGGTGCCAGCACCCTAAGGCACTTTAAGGTTCTGTGCAAAACCCCACGTCCCACAAGTCGCTGTCCGGAAGGAGCTTGTAATCCGGTGGCATGAGGTCGCCCGCGGCATGCGCAGAACCAGTGACGGCGTGACTGCTCCAACAGGACAGCGCGGGGAGAGCCCTGGACGGGGACGGCGCACACCCAGTGCAGGTGAGTGCTGTGGCCTGTCTCGCCAGTGGGAGTGAGAATGATACACATTTTACGTTGGGCAGTCAGGGCCAGAGAGCAGGCGCAGACTCCACCCTGGCACGCTTCCTAAGTTCCTCACTGGGTCTGACGCTCTCACACCCTCAAGTCCAGCGTCCTCCTAGGAGGACCTCAGTCTTGCGGCAATCTTCAAAGGCTTTCCTCGTTCAGTCGAAACCACCTCCTGTCGCTTCTGAGCCCCTCTGGCTCCCACACCCCACCCCCAGCATTATCTCTAGACCCAGAGTCACTAACTCTG TCONS_00067648 . 5' 7197 TCONS_00067648 . 5' 7197 EMBV3_06782 ACATTAACTCCTGAGAGGACCTTGAGACATACAACGGGAAGCAAGTGGCAAGCAGGATGG Gene BVT0102_025405 + 0 NULL GK000010.2:82273228-82347060 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018096 TCONS_00018093 TCONS_00018094 TCONS_00018095 1 XLOC_009180 Coding TCONS_00018095 XLOC_009180 NonCoding Coding SYNJ2BP 10:82344610-82404345 j TSS12235 3748 1 TCONS_00018095_10 90 0.0426894343649947 4 0.937322128101249 0.00141957474697418 0.000520684485587328 3.15498526513035e-07 4.80256495885511e-05 0.000739403663504157 6.47042739379704e-07 0.000165075090636727 7.19170511732107e-20 0.00224487597592458 7.85045883800888e-05 2.85653907655193e-08 5.92365810490616e-05 0.000340949608432417 0.000207156396780498 0.000612451667722599 0.00159152329742712 0.00328138121780588 0.00208813074509964 0.00158604347911266 0.00173816562539954 1.12627474182019e-08 0.00124941244731726 0.00063369121564179 0.00267962244499921 0.000734173049902738 0.000360136444807847 0.000587187741306428 5.7451039647481e-10 0.000139603680345512 0.000127003809653945 NM_001035355.2 SYNJ2BP Bos taurus synaptojanin 2 binding protein (SYNJ2BP), mRNA. 0.0 1535 99.88 0.227588046958378 NM_018373.2 SYNJ2BP Homo sapiens synaptojanin 2 binding protein (SYNJ2BP), mRNA. 0.0 729 78.91 0.235058697972252 0 noncoding 1 1 1 1 0.00477071684146757 0.967477400333403 0.0123744677019013 0.789682872646363 CGGGTATGTGGAGTTCGTTGGCATCCTCGTATGTTTGGTAGAAGCACCTCTGTCGAGTTGTGGATGTTCTACTGGGTGTATAACGAAGGGGAGACATTGTGTCATTCTGCCATGCTGCTGTTGTCACAAGACTCCATCTCTTAATGGCAAAATGGCAAGATCACCTAGCAGTTTGATTTGAGGACTGTGTGAGAGTTCGTGCCGGGCGGCAGCCAGAACCACTACTCCCGGCATTCCTGGCGCTCGCCCCTCGCCCGGCTTCCTTTTCCGGTTCGCGGCTGCTGAAACCGAAAGTGCGGTGTTGTGGCGCTGCCGGCAGGGCTTCTCAACCTTCACCTGCGCCGATCCTCGCTGACCCCGGTCGGGAAGCCAGAGTAAAATATGAACGGAAGAGTGGATTACTTGGTTACCGAGGAAGAGATCAATCTCACCAGAGGACCGTCAGGTCAACGGCCAAGACCTAAAGAACCTGCTGCACCAGGACGCTGTGGACCTCTTCCGTAACGCGGGCTATGCTGTGTCCCTGAGAGTGCAGCACAGGTTACAGGTGCAGAATGGGCCCATAGGACCTCAAGGTGAAGGGGAGCCAAGTGGTATTCCCATAGCTATGGTGCTGGTGCCAGTGTTTGCCCTCACCATGGTAGCATCCTGGGCCTTCATGAGATACCGGCAACGACTTTGAAAAACTTGCTTTCTTCCTGTGCTCCCAAAGAAGAAGATACATTTCTCTTTTTCTCTCACCCTCTCCTGCCAGTCTCCCATAACTTTCCCTCTACATAGCCAGCTCATGATTTCAAGAGACTGCTACCCAACCAGAATCTTGCTGTTCGAAATCTCTGAATCCTCATTTTCTCATGGGAGAGTAAAGGCAGTGTCTGAAGGAAACCCAAAAGAAGGACTTGCCTAGAACAAACGAAGAGTTATATATTTTACTAGAACCGCCAATAGAAGTTCAGCTACAACCCAAAAAATGGGAAAGGTCTAGTCTTCCCATCACCCTGCAGTATTCCTTTTTTTCTTACCTGGCATGCATCAAAGGCCAGCTGTAATAAGAGGAAAAAAGGATTTTTCTCTTTAATGATCTTCCTTGGGAAGTTTTTGTGGCCTTTTATTTAATTTCTAACTATTAATACCTACTTGGGCACCTACTTTGTATCAAACAAAGATGAATGAGAAGAACATTTCTACGTTTTAAAACAAATATTATATATACAGACACACACATATATATACATACATATTCATGTATGATGTGATAATAGTGATGCCTTATGGAGAATTAAAGAAGTGGAAAGCAACTCCAGTTTCTAGGTTTCTGCTGTAAGGATTAAGTGATAGTCTTCAATGGAAGAATTCAGGATGTAGCAAGAGTAATAGAGTAAAGAGGATAGCAATCTGAGTCTTTTAAAAAAACGAAAACTAAAGCAACTAATTAAAAATCTTAGAACACTATTTCTTCTTCATAATACCTGTGGTGACAGCTGAGGTAAAATGCCATAATCCAGCTTTGTGCAAACAAGTCTTTAAAAAACTTGGGAGAGGTAAACGTAAATCTTACTAGTCTCTGGACTACTCTAGTGACTCTTTTGGTACCTTATAGTCCTGTTAAAGGATCAACTGGAATGGCTGTAGTCAGAGCTATGAGGCCAAACCAACCCAGTGAAAAAACTCAGGCCATCTACCAGTCTTTCCTGTTTCTGTTAACAGGCAAACTCAGAGAGAGGGACTGCTCCCCAGCGGGACGGCCATGAAATCAGCTCTCCTTCAATTCAGTTAAGTTGAAATGGTTTGGATTGCTGATTTTTCTTTTTTTGAAATTTTCTAAGCACTGGTTATGGCTTTTAATGAATGAACTATTTTGCAAGGAAGAGGAAGAAAGTTTTGTTTGTTTTAGGGGCTCTGGAAGTTTGGTTTATGTTTTGTGAGGAAAACTTATGGATGAATGGATATTAGGGAATATCAAGGGCACTAATGAGGTGGGAACCCTCCTGTTCTTATGGTATTGAAGGTTGATTTTAAAGCACTCATGAGAGCTGAACCAAGGCTAGTTTTCTGGCTTAAAGAAAATCATTTCCATCCTCTACGTATACTTGGCAGGCTATAGGCTTTACATAATCTTGGCAGCAAGAGTATGAAAACTTTCCCTCAGGATTCAAGAAGGCAGTTGTGCCAATTTTTAGCATGGATAATCTGATAAGAATTTTACAAATGTCTGTTGGACATCAGGTTTGTTACGACTTTTACAAAGAAGCAAAATACATAGCCTCCATCCTGAAGGGTTTTTGTTTTTTGTGTTTTTTTTTTGTTCCATTTGGGAAGAGAACACTTTTACACATAAAATAGTATACAATTACCTCCATAGACAGGGCAATGCAAGTTAGGGTCAAATTTATATTGCAAACAACAAAAGGGATGGTTACTGAGAATTGAGGCAATTGAGAAAGTTCTGTGGAGGAAGAGGTCAAGTTAAGTACCCTTGAGTTCACAGTCTAGTTAAGAGAATTCATAAATAGATGAGAAGTTAAAAGTATATCATAAGGTTAAGTAATAGTTGAGAACAATAATAAAAGAAATGGCACTATTCAGAATATGATGCAGCAACAAAGATGTGCACTTTTTTTTTTTTTTAAAGGAATTCAGAAAAAGAAAGCGGTTGATGGCATCAGGCCAGAGTGGAAAGAGAAGGCTTTTAAAACAAAATCTCAGTTAAGACTTTGCCTCTGGGTCACCTATTTGTAGAAGAAGAAACTTTCTGTAAACGATCCTGAGGACTTCTGCCTTCAGACCTGACAGTTGAATACCTCTGAGACTCAACTTAGACAACCGCAGTCATAGATTCCATGGAGAAACCCTCACAGTATTCCACTTCTCACCTCAACCAGCCCCACTGTGGAGGCGCAGCCTCAGGTACCCTTCCTGTGTTGGGAGGAATGTACAGCTGCTTCTGCAGTGGGCCTGCTTTCCTCCCAGGATTCCTCTCACGGTTTAAACATTAACTCCTGAGAGGACCTTGAGACATACAACGGGAAGCAAGTGGCAAGCAGGATGGAAGGCTATTTCATCTTTTGTGTGTTGGTATATGTAAATAAAAACACCTATCACATCATTGGTAGAAGTTTTGCTTTGATAGTAGGGATTCTGATATACTTTAATAATTCAGGTTTTCTCTGGAATTGTATTCAAAAGTCAATAGGGACTTCTCTGGTTGTCCTGGTTAAGAATCCACCTTCCAATGCAGGGGACGCAGGTTTGATCCCTGGTTGGGGGACTGAGGACCCTCCTGCCTCAAGGCAACTAAGCCTGCACCACAACTACTGAGCCCAAAGTACGCTAGAGCCCGAGAGTCACAGCCAAGACCAGATGCAGTCTAATTAATTAAAAAACAAAGATCAATATATTAAAAGGTTTAGGCAGGTATGCTACTTAAATTATACTGATTTCTGACTTTCTAGATAATTATAAGTGAAGGATTGGAGTCCATTGTAGGTCATTAAAACATTCATGCTCTTTGTAGATCAAATCTAACATTTCTATCACTTTATCAGTTGTATCTAATATTCCTCGCACCTAAATTCTATGTTCAAAATGTTCAAAGTTCTAAAGATTGAAAGAAAGTATCTTTTAAGACATTTACTTAAAACACTTCTCTACATTTATCATCCTATGTTACATATACAGTTCTAATGAGACATTGTTTGCTTCAATTCAATTATCTTTTCCTGCCAAATTTTAACCAGTGCTATTAACT EMBV3_22147 AGAGAGAGCAGTCACCTGCCAGCGGACACAGAGTCGGAACTTGGAGGAAGTCAGCTAGAA Gene GeneID:282233|FLT3LG:NM_181030:50_cdna Constitutive 0 NULL GeneID:282233 18 GENE FLT3LG NULL fms-related tyrosine kinase 3 ligand EMBV3_18222 GCGCACTGCACGCCAGACCTCACTCTTTTTGGAAATCATAGTCTCTGGTAGTCCCTCCCA Gene BVV0102_371251 + 0 NULL GK000003.2:113622809-113633793 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180300 1 XLOC_110069 NonCoding TCONS_00180300 XLOC_110069 NonCoding NonCoding - 3:113629018-113629894 - TSS135059 876 3 TCONS_00180300_3 56 0.234018264840183 1 0 0 0 0 3.7918510495429e-05 5.12368324473782e-07 0 0.000213030631365437 6.75196223665699e-06 6.4335792920579e-07 0.00024423897439286 2.61322714087302e-06 0 0 5.36985257979416e-06 0 0 0 0.000486921524834635 0 0 2.66572823130233e-07 0 2.09453204948557e-05 0 0 0 0 0 0 0 XM_005194975.1 FNIP2 PREDICTED: Bos taurus folliculin interacting protein 2 (FNIP2), 2e-10 71.6 80.23 0.0901826484018265 0 noncoding 0 0 0 0 TCTTTGTTTAAATTCATAATCAATTCTAGAAAATGCAAAACAAATGACTGGAGGCAAATCAGTGCTCACCTGGGACGGGAAGTTGACTGAAAGGTATGCCAGGGGACCTTCAGGGGCGACGGAAATGTTGGGTCTTCATCAAACTCTGTACTTGAGTAGATTTGGTTGCATGTAGAGTATGTATCTATAAAGATTGGGGAGGAAGAAGAAGGACATTTATATTTAAAAATTTAAAACTTCAAATAAGGAAGAAAAAAGAAAAATTTAGAACTTCATAACCTTAGAATAAAGAACCACCCTTTATATTGAAAACATTTGGGTCTATGAAAAAACTGACAACAATGTCCCTATTTTCCTCAATTCTTCACCAAGCGGAGAAAAGTGCATTACAGACCAGGGGCTGGGAGGGACTACCAGAGACTATGATTTCCAAAAAGAGTGAGGTCTGGCGTGCAGTGCACCCCAGATTCTCCTACCTGTCCCAGTGCTGACAGGTCAGTGACTGAGACCTTGGGGACCTGGGGCTAACACAGCTTCAGGAGAATGGGGTCCCAGGGGCACCCACGGCTCAGGGCAGCCTATCTGATGGAGACACTAGAAGGGCCCAGTCGTTTTTCTTCCTCTCTTAAAAAAAAAAAAAAAAAAAAAACGCACCTCACAGCTTGTGGGATCTTAGTTTCCCAACAGGTATTGATCCCGGGCCCCCGGCAGTGAGAGCTCGTCAATTACTGGACCATCGGAAATTCCCTTATTTCTTTCTTTCTTTTTTTTCTTTTAAGGGAAGAGAGAAGATTTCTTAACAAAACCTAGCATTCCCTTCACACAGACCACCAATGTCAGCTCCTTGGTTCCTATCCCGAAGACTGCATATGATGT TCONS_00171420 . 5' 3900 TCONS_00171420 . 5' 3900 EMBV3_18519 CACACCCATCACCATTTGCTCAGTGACAAAGTTACGAGAGTAGTTCTGAAACGGAGAAGG Gene BVT0102_049129 + 0 NULL GK000010.2:3951948-3997683 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015673 TCONS_00015674 1 XLOC_008536 Coding TCONS_00015674 XLOC_008536 Coding Coding PGGT1B 10:3994052-4051261 = TSS11018 5017 1 TCONS_00015674_3 341 0.230615905919872 8 0.912442315760034 0.000997577242558459 0.000297911515919884 0.000460286150955158 0.000286690337337497 0.000677728403225196 0.000238777599260015 6.22076179330649e-07 0.000341834386185924 0.000645541225475181 3.67464114362867e-08 1.84845614314559e-09 1.83284139507547e-07 6.69089941101781e-05 4.84465092146997e-05 0.00034160000437306 0.000419795656821175 3.53592243131307e-05 0.000190803680924986 7.74979303068878e-05 1.40990142796805e-10 9.24483288496744e-06 8.86693163590006e-05 0.00024578326153069 0.000237064629225136 0.000267215791579137 0.00059354911191103 0.00045133708343879 6.67748370978871e-05 6.07496707906339e-20 9.8080392257672e-10 NM_001015560.1 PGGT1B Bos taurus protein geranylgeranyltransferase type I, beta subunit (PGGT1B), mRNA. 0.0 1550 100.00 0.171018536974287 XM_005272021.1 PGGT1B PREDICTED: Homo sapiens protein geranylgeranyltransferase type I, beta subunit (PGGT1B), transcript variant X2, mRNA. 0.0 1357 77.36 0.358580825194339 TCONS_00015674_3 sp|Q5EAD5|PGTB1_BOVIN PGTB1_BOVIN Geranylgeranyl transferase type-1 subunit beta; 0.0 694 90.45 0.997067448680352 2 coding 0 0 0 0 0.137994424289779 0.514277996683866 0.0208742557034852 0.701337935718798 GTCGCCCCTCGGTTCCCTTAGAGCCGCGCGCCAACTGCTTCCGGGTCGCCGCAGACGTCGTTTCCGTAGCAGTATGGCGGCCACAGAGGATGAGCGGCCGACGGGGAGCGGAGAGGGAGAGCGGTTGGATTTCCTACGAGACCGGCACGTGCGGTTCTTCCAGCGCTGCCTCCAGGTTTTGCCTGAGCGCTACTCTTCGCTCGAGACCAGCAGGTTGACTATTGCATTTTTCGCACTCTCTGGGCTGGATATGTTGGACTCCTTAGATGTGGTGAACAAGGATGATATAATAGAGTGGATTTACTCCCTGCAGGTCCTTCCCACAGAAGACAGATCAAATCTAAATCGCTGTGGTTTCCGAGGCTCTTCCTACCTGGGTATTCCATTCAATCCATCAAAGAATCCCGGAACTGCTCATCCTTACGACAGTGGCCACATAGCAATGACCTACACTGGCCTTTCATGCCTAGTTATTCTTGGAGATGACCTAAGTCGGGTAAATAAAGAAGCTTGCTTAGCAGGCTTGAGAGCCCTTCAGCTAGAAGATGGAAGTTTTTGTGCAGTACCTGAAGGCAGTGAAAATGACATGCGATTTGTATACTGTGCTTCCTGTATCTGCTATATGCTCAACAACTGGTCTGGCATGGATATGAAAAAGGCTATCAACTATATTAGAAGAAGTATGTCCTATGACAATGGGTTGGCACAGGGAGCAGGACTTGAATCTCATGGAGGATCAACTTTTTGTGGCATTGCATCACTGTGCCTGATGGGTAAACTAGAAGAAGTTTTTTCAGAAAAAGAACTGAACCGGATAAAAAGGTGGTGCATAATGAGACAACAGAACGGTTATCATGGAAGGCCTAATAAGCCTGTTGACACCTGTTACTCTTTTTGGGTGGGAGCAACTCTAAAGGATGCTTTGCATGCATACTTTGGAATTTGTGGCCTGTCACTAATGGAGGAAAGCGGCATTTGTAAGGTTCATCCTGCCCTGAACGTAAGCACACGGACTTCTGAGCGCCTTCGAGATCTCCATCAGAGCTGGAAAACCAAGGACTCTAAACAGTGCTCAGAGAATGTGCACATCTCCACATGACTAACTTTAGCCGGGGGCGGCGGGGAGGGTTTGTAGCCTAACTGTAGCTCAAGGTTAAAAGCCATGGATAACCACATGTGCTCTTTTTTTAAGAGGTAGTCTTACAATCGAATCTTGTGCCGATGTCACTTTGGGATATGGTCTTGAGCCAGTAACCTTTGTACTAGGTTTCAAGAAAATCTTTGTTGAAGTTTGAACCACAGTGGACTTCGTCGTGGTTCTTAAATGTTTATACTGTATTTCTAAGTTCTTTGAGGCAAATTAACTGTATGTATGTAGGTTATCTTAAAAAAAAAAAAAACTTGAGTACAGAATTGTATCATATTATAAAATGGACACGAATCTTCAAAAGAAGTTCACATAGCAGTGGTAATCTTCGGGTGAGCACTTAGTGATCATTTAAAAAGCTTGACTGCTTATGGTGGAACATTGCTTTAATGAATTAAGTATCTGGGGTTATTCTTTGAAAACAGATGATCCCATAATTTTTTAAAAAAGAATGACTTATTTTGTGTTGTTTTTAAGTAAAATGTGCCAATTAAACTTTTGTGGCCTATATAAATGAAATTAACTTCATAGCAAGAATGAATAGGCTTAACTAATACAGTAATTTCCTAAAGGGAGATTGTTATACAAAGACTCTTATGTAGCTGAGGAGAAAGTAATTTAACTGTGTGCGATTGTGAATGGGAAAGTTTCGTGCTGTGTGGGTCATCTATTTTAGATGTTGTTGGGGTAAATAACAGTTACGTTTGCTTTTAATCTCGAATCATTAGTCATTTTTTTTTTTCTCCTTTCTCCAGGGAAAGCCGTCTTACCTAGAGGGAAAAACATTTAGTGGTTTTGTTTCTTTTTCTGAGATAAATTTTAAACTGTATTTTTATAACTGAGTTATTTTTAGCCATTTGGTTTTTTGTTGTTCTTGCTTCCAGTGTTTTAGCTTTTCTGATTTCAAAGTGATGATTTTCTAATTTTTTGAAGTTAAATAAGTAAACATTTAAGTGAAAAAAAATAACACCTCTCAATTAAACTTAATGGTATAGCTCCATACACAGTCATTCATATTTTTGTAATATTTTCAGGTAAGTGGGAAGGTAATGTATCCCTTAGAGGTTAAGGACTGGGGTTTGCTTTTCATTGGTCTGTTTTCTTCATTTTGTGACCTACCTGAATTGTATAAGGAGTGGTGTAAAAACTTCCCTTTATTAGTAATCAGTTTATCAATGAATCACACCCATCACCATTTGCTCAGTGACAAAGTTACGAGAGTAGTTCTGAAACGGAGAAGGAAATCATTTCACCAGAGGGACTAGGTTTAAGTTAAAATCTTGGTGAAAATAAATGTTGGATTTTTAGGTTTACAAGTATCAGGATAAAAACTAAATTACTGGTATCACTGTTTAGGTATTGTAATATCTAAATTTTTATTTTTTAGTGGTGAAAAAAAGTACCCTTAAATAATGATCCCAGGGAAAACCTAGTATATACATGACAAAATGATTCATTTATTATTCGCATGCTTAGTTTAAACCTCAATTTGCCAAAGTCAACTCTTTTTTTTTTAATAGAAATAAAATCAGAGAACTGATGGTGGGGAAAAAATAAACCTGACAACAGGTGTCATCCTTCCATGAATTTTTCCAGTTTGCACTGGTTTAAATCCTGACAAATTAAGATACCTGCATCTCAAACTAAGACATTTCTTAGACATCAGGAGTTAAAATGACATATATGTAATAGCTTTAGAACTATATGAAAAGCCCCCGATTTTTTTTATTCTGAATTGCCATTAGTGGTTGAAAGTGTAAAAAAGTTAGTATCTGTATTTGTAAGATGTAGAATTCCAAGGTCAAATTATTTCATAAAACTGCTAAATATTTTCTAACTCCTTGTGTAATTTAATTGCATAAGATTACATATGTCAGTGCGATTCTAATTAGCATGCTCTTGAGAGGCATTCTTAGGAAACTGTTGGCCAGTGAATGTTCAATTCCACAACAGCATATTGACCAAAAAAACCACCAGGCCATTGTGAATTGTGGAGAAGCTATTCCGAACTTTTTCTAAATAGTTACTTACAGGAAAGTATGAATAAAATAAATTATAAGCACTGTTTCATATGTATACTTGATCTTTAGCAGTGGTAATAGAACGAGAAGGTGGATTATGAAGTCTCAATCTGTTCCCTATGCTCTTTCCCCACCTCCAGTATGGTATTTTTTTAAACTGTGGTAGGAGAATCCTTGTTTTGGACATCTGCATGAAAACAAGGTTGATCAGGTCGTTACAACACGATTCAACCTATTTATCATCTACAAGTGCTTTTAGACTTGACCTATGTGTACATTTTAATTAGATCTTTAAATAATCATTTATAAATATTTAAACTCAAATAGAAATTTTTTCCAACGGGGTACATCGTTTGAAACTGTGGTTTGTTGGGTCTGATAATATTTCAGTGTCATTATCGTAAAGAGGTACTCTGGAGTCAGATGACTGGGGTTTAAGTCCCACATCTGCCAGTTCACCAGTGTCATACTGGACCCTAGCTCCCCCTTTGATAAAGTGAGGTGAGGGGATCTCACAAGGTTTTCTGAAGGTCACATGCATGCATTGCTAAGTCGCTTCAGTCGTGTCCAACTCTGTGACCCTCCTGGACTGTAGCCTGCCAGGCTCCTCTGTCCAGGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCACTTCCTTCTCCAGAAGGTCAGATGAGATAATACATATTAAGTACTTAGCATACTACCTGAATACAGTGAACTCCTAATTATAATTTCTGTTATAACCATCTTCAAATTGTTTTTAAAACCTCTCTTTTCTATAATAGAGATCCCACAGAATTTAAACTCTAGGAAGATGATGGCAGCAGTGTAGTTTCTGAGTCTTCCCATTCGACCCTAGAGTAACTAGGATCACCACAGACCCCATTCTACAAAACCAGGTGACAGGGTGTCCCTGTGAACTTCAAAATACAGTGTTGGACAACCCACTGACCAGCGTAGTTTCAGCATCTGTGTGGGAGGAAGTGAAAGGCAGGCAGCTGGTTTCTGTTGGCCTTGAGAACAGAGCTATCACACTGCCCACAGTTTTCTCACTAGAAAGTGCAGCGGGCCAGTCCGAGAGCAAAAGCTGGAACTGGAAGGGGTCGCACAGGTCCCCACGTGCACCTAAGTGTTAGATCAGTATAGTGTGGTCTGATCGTTGTGCGGGAGCAGCCTGGGCCCTGGCCTGTTTGCATCTTAAACCTAATGAGACAAAGCCCTGCTCAAGTTAGAATCCAAAGTGGCCCAGATAGGTACCACAGGACCAAGGGAAGAGAGAGGCCAGATACATAGAAAGAAAGGGCAGCATACATAGACACGATACGTGGACATGGGTGATCACTTTGTGGAAGTGAAACAGGAGCTTACAGGGCCAGAGAACAAAGAAGAGGCGTCCTAGGGCACCGCTCCCCCGTAAGAGTACAGGAAAACTCATTTTGCCAGAAACAACCTGAGAAGGATTACTGTCAAGTCCTATTAAAACTGTCTTAAGGAATAGAAGGAGAGCCCAGCGTCCCTCAGACAGCGAAAGCACTCCAGAAGGACATGACTACGAGACTATGAAAAACTATTACGACAGGAAATGTATAGTTTCAGAACAAGATCAATAAAAATGGGAAAAGCTAAGAATTACATAATCAAGTCTTAAAAGCTGGAGGAAAAAGCAAACCCAAAGGAAGTAGAAGGAAGGGATTAATAGAAATGGGGAAGGGGGAAGATGCGATAAGACAAACAGCCAGACTTTCTAACAGAAAAAGGATAAGTTTCAGTAGCAAGAGAAATAACCATAAACCAGGAAATTTTTCAAAATTACAACGTAATTTTATGTGATAAATTAGAAAAT EMBV3_00217 TCCCCGCCTACTCTGGTCATGATCACAATGATCACATTTCTCCTGGATCCCTTGCTGCCA Gene GeneID:515227|LOC515227:XM_002698688:36_cdna Constitutive 0 NULL GeneID:515227 27 GENE LOC515227 NULL similar to NOL1/NOP2/Sun domain family, member 5 EMBV3_31127 TGGATAGCCAGAGGGTCTGAAAGGTAGTGTGTAGCGTGACTTTTGGTCACTTTCCCAGTG Gene GeneID:541012|TCP11L2:NM_001105431:19_cdna UTR3_Alt 2 NULL GeneID:541012 5 GENE TCP11L2 NULL t-complex 11 (mouse)-like 2 EMBV3_06975 CACCCTCCAGTGAAGATGGCTGTCCACAACTACCACCGTTGAAACCGAAAGTAAGAGTTG Gene BVV0102_196994 - 1 EMBV3_25873 GK000017.2:57989404-57999615 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075650 TCONS_00075653 TCONS_00075661 TCONS_00075649 TCONS_00075656 TCONS_00075660 TCONS_00075652 TCONS_00075663 TCONS_00075654 TCONS_00075651 TCONS_00075657 TCONS_00075662 TCONS_00075658 TCONS_00075655 1 XLOC_046631 Coding TCONS_00075663 XLOC_046631 Coding Coding CIT 17:57841700-57991177 j TSS56996 8186 1 TCONS_00075663_7 1858 45 0.945536407182424 0.00184446176603015 0.00100714539780841 3.43749380133794e-13 0.000595174932615919 0.0002329978456064 0.000418533294024205 1.06890295815038e-41 0.00097528464712539 0.000288156956234779 2.29464259317701e-05 1.00118155002165e-21 2.22357471026858e-08 0.000103218646751743 6.08030168001625e-07 6.376968552724e-05 0.00196535791375029 1.49240128263221e-11 1.10358701468571e-12 0.000528587219049595 0.00262091912217447 7.87913876216959e-05 0.000728038377579405 0.00136607007356718 0.000741641990154982 0.00127132728927724 0.00169219100406396 0.00130072020292463 0.000104946747059305 2.27180929885641e-08 0.000346958271417513 XM_002694582.3 CIT PREDICTED: Bos taurus citron (rho-interacting, serine/threonine kinase 21) (CIT), mRNA. 0.0 1.420e+04 99.44 0.967749816760322 NM_001206999.1 CIT Homo sapiens citron (rho-interacting, serine/threonine kinase 21) (CIT), transcript variant 1, mRNA. 0.0 9982 87.27 0.967139017835329 TCONS_00075663_7 sp|P49025|CTRO_MOUSE CTRO_MOUSE Citron Rho-interacting kinase; 0.0 3678 97.10 0.9994617868676 4 coding 1 1 1 1 -0.00666621022579278 0.969699998237606 -0.00588456422700955 0.937273855052069 CACCAGATAAAGGTTATTTTTGTCCTGAAAGGCATACTGCAACTGGGGGATCCAAGGACTTGTACTCTGAGATAATATGAGGACCAATTAGATGAAAATATGATTCAGTTTTACCTAGCTGAACTGATTTTGGCTGTCCACAGCGTTCATCAGATGGGCTATGTACATCGAGACATCAAGCCCGAGAACATCCTCATTGACCGAACGGGACACATCAAGCTGGTGGATTTTGGATCAGCTGCTAAAATGAACTCAAATAAGATGGTAAATGCCAAACTCCCGGTTGGTACTCCAGATTACATGGCCCCTGAAGTGTTGACTGTGATGAATGGGGATGGAAAAGGTGCCTATAGCCTAGACTGTGATTGGTGGTCAGTGGGAGTTATTGCTTATGAGATGGTTTATGGAAGATGCCCATTCACTGAAGGAACCTCAGCCAAAACCTTCAATAACATCATGAATTTCCAGCGGTTCTTGAAGTTTCCAGATGACCCCAAAGTTAGCAGTGAATTGCTTGATCTAATCCAGAGTTTGTTGTGTGGCCAGAAAGAGAGACTGAAGTTTGAGGGCCTTTGCTGTCATCCTTTCTTCTCCAAAATTGACTGGATTAACATTCGTAACTCTCCTCCCCCCTTCGTTCCCACCCTCAAGTCTGATGATGACACCTCCAATTTTGATGAACCAGAGAAGAATTCGTGGGTTTCATCCTCTCCGTGCCAGCTGAACCCCTCAGGTTTCTCGGGCGAAGAACTGCCGTTTGTGGGGTTTTCGTATAGCAAGGCACTGGGAATTCTTGGTAGATCTGAGCCTGTTGTATCAAGTCTGGACTCCCCTGCCAAGACTAGCTCCATGGAAAAGAAACTCCTTATCAAAAGCAAAGAGCTGCAGGACTCCCAGGACAAGTGTCACAAGATGGAGCAGGAAATGACCCGGTTACATCGGAGAGTGTCAGAGGTGGAGGCTGTGCTTAGTCAGAAGGAGGTGGAGCTGAAGGCCTCTGAGACTCAGAGATCCCTCCTGGAGCAGGACCTTGCTACCTACATCACAGAATGCAGTAGCTTAAAGCGAAGTTTGGAGCAAGCACGGATGGAGGTGTCCCAAGAGGACGACAAAGCACTGCAGCTCCTCCATGATATCAGAGAGCAGAGCCGGAAGCTCCAAGAAATCAAAGAGCAGGAGTACCAGGCTCAAGTGGAAGAAATGAGGTTGATGATGAATCAGTTGGAAGAGGACCTGGTTTCGGCGAGAAGGCGGAGTGACCTCTATGAATCGGAGCTCAGAGAGTCTCGGCTGGCTGCTGAAGAGTTTAAGCGGAAAGCAACAGAATGTCAGCATAAACTGATGAAGGCTAAAGATCAAGGGAAGCCTGAAGTGGGAGAATATGCCAAACTGGAGAAGATCAATGCTGAGCAGCAGCTCAAAATTCAGGAGCTCCAAGAGAAGCTAGAAAAGGCTGTGAAAGCTAGCACAGAGGCCACCGAGCTGCTGCAGAACATCCGTCAGGCGAAGGAGCGGGCCGAGCGTGAGCTGGAGAAGCTGCACAACCGTGAGGACTCCTCCGAGGGCATCAAGAAGAAGCTGGTGGAGGCCGAGGAACGCCGCCACTCTCTGGAGAACAAGGTAAAGAGGCTAGAGACCATGGAGCGTAGAGAAAACAGACTGAAGGATGACATCCAGACAAAGTCCCAACAGATCCAGCAGATGGCTGATAAAATTCTGGAGCTGGAGGAGAAGCACAGAGAAGCCCAGGTCTCAGCGCAGCATCTGGAGGTGCACCTGAAACAGAAAGAGCAGCACTATGAAGAAAAAATTAAAGTGTTGGACAATCAGATAAAGAAAGACCTAGCAGACAAGGAGACACTGGAGAACCTGATGCAAAGACACGAAGAGGAGGCCCATGAGAAAGGCAAAATTCTCAGCGAGCAGAAGGCGATGATCAATGCTATGGATTCCAAGATCAGATCCCTGGAACAAAGGATAGTGGAATTGTCGGAAGCCAATAAACTTGCGGCCAACAGCAGTCTCTTTACCCAGAGGAACATGAAGGCCCAGGAAGAGATGATTTCAGAACTCAGGCAACAGAAGTTTTACCTGGAGACGCAAGCTGGGAAATTGGAGGCCCAGAACCGGAAGCTGGAGGAGCAGCTGGAAAAAATAAGCCACCAAGACCACAGTGACAAGAACCGTCTGCTGGAGCTGGAGACCAGGCTAAGGGAGGTCAGTCTAGAACATGAAGAGCAGAAACTGGAGCTCAAACGCCAGCTCACAGAGCTGCAGCTCTCCCTGCAGGAGCGTGAATCCCAGCTGACAGCCCTGCAGGCAGCACGGGCGGCCCTGGAGAGCCAGCTCCGCCAGGCCAAGACGGAGCTGGAAGAGACGACAGCAGAAGCAGAAGAAGAGATCCAGGCGCTTACGGCACATAGAGATGAAATCCAGCGCAAATTCGATGCCCTTCGTAACAGCTGTACTGTGATCACGGACTTGGAGGAGCAGCTAAACCAGCTGACGGAGGACAATGCCGAGCTCAACAACCAAAACTTCTACTTGTCTAAACAACTCGATGAGGCCTCTGGTGCCAACGACGAGATTGTGCAGCTGCGAAGTGAAGTGGACCATCTCCGCCGCGAGATCACTGAGAGGGAGATGCAGCTCACTAGCCAGAAGCAAACGATGGAGGCGCTGAAGACCACGTGCACAATGCTGGAGGAGCAGGTCATGGACCTGGAGGCCCTGAACGACGAGCTGCTGGAGAAGGAGCGGCAGTGGGAGGCCTGGAGGAGTGTCCTTGGTGACGAGAAGTCCCAGTTTGAGTGTCGGGTTCGAGAGTTGCAGAGGATGCTGGACACCGAAAAGCAGAGCAGGGCGAGGGCCGACCAGAGGATCACTGAGTCGCGCCAGGTGGTCGAGCTGGCAGTAAAGGAGCACAAGGCCGAGATCCTGGCCTTGCAGCAGGCTCTCAAGGAGCAGAAGCTGAAGGCCGAGAGCCTCTCCGACAAGCTCAATGATCTGGAGAAGAAGCACGCCATGCTTGAAATGAATGCCCGAAGTTTACAACAGAAGCTGGAGACAGAACGAGAGCTCAAACAAAGGCTTCTGGAAGAGCAAGCCAAGTTACAGCAGCAGATGGACCTGCAGAAGAATCATATTTTCCGTCTGACTCAAGGGCTGCAAGAAGCTCTGGATCGGGCTGATCTGCTGAAGACAGAAAGGAGTGACCTGGAATATCAGCTGGAAAACATTCAGGTTCTCTATTCTCATGAGAAGGTGAAGATGGAAGGCACTATTTCCCAGCAAACCAAACTCATCGATTTTCTGCAAGCCAAAATGGACCAGCCTGCCAAAAAGAAAAAGGTTCCTCTGCAGTACAATGAGCTGAAGGTGGCTCTGGAGAAGGAGAAAGCTCGCTGCGCGGAGCTCGAGGAAGCCCTGCAGAAGACCCGCATCGAGCTCCGCTCCGCCCGGGAGGAAGCTGCCCACCGGAAAGCTGCAGACCACCCACACCCATCTACGCCGGCTACCGCCAGGCAGCAGATCGCCATGTCCGCCATTGTGCGGTCACCCGAGCACCAGCCCAGCGCCCTGAGCCTGCTCGCCCCGCCGTCCAGCCGCAGGAAGGAGTCTTCCACTCCAGAGGAATTCAGCCGGCGTCTTAAGGAGCGCATGCACCACAACATCCCTCACCGGTTCAACGTGGGACTGAACATGCGAGCCACGAAGTGCGCCGTGTGTCTGGATACCGTGCACTTCGGGCGCCAGGCATCCAAGTGTCTCGAATGTCAGGTCATGTGCCACCCCAAGTGCTCCACATGCTTGCCAGCCACCTGTGGCCTGCCAGCCGAATACGCCACACACTTCACCGAGGCCTTCTGCCGCGACAAAATGAACTCCCCGGGTCTGCAGTCCAAGGAGCCCAGCAGCAGCCTGCACCTGGAAGGGTGGATGAAGGTGCCCAGGAATAACAAGCGAGGACAGCAAGGCTGGGACAGGAAGTACATCGTTCTGGAGGGCTCCAAAGTCCTCATTTATGACAACGAAGCCAGAGAAGCTGGACAGAGGCCGGTGGAAGAATTTGAGCTGTGCCTTCCCGACGGGGACGTGTCTATTCATGGCGCCGTTGGTGCTTCTGAACTTGCAAACACAGCCAAAGCAGATGTCCCCTATGTCCTGAAGATGGAGTCTCACCCCCATACCACCTGCTGGCCTGGGAGGACCCTCTACTTGCTGGCTCCCAGCTTTCCCGACAAGCAGCGCTGGGTCACCGCCTTAGAGTCAGTTGTGGCAGGTGGGAGAGTGTCTAGGGAAAAGGCGGAAGCCGACGCTAAATTGCTCGGAAACTCCCTGTTGAAACTGGAAGGTGATGACCGTCTGGACATGAACTGCACGCTGCCCTTCAGCGACCAGGTGGTGCTGGTGGGCACCGAGGAAGGGCTGTATGCGCTGAATGTCTTGAAGAACTCCCTCACCCACGTCCCAGGAATCGGAGCAGTCTTCCAGATTTACATCATCAAGGACCTGGAGAAGCTCCTCATGATCGCAGGAGAGGAGCGGGCCCTGTGTCTCGTGGATGTGAAGAAGGTGAAGCAGTCCCTCGCGCAGTCTCACCTCCCCGCCCAGCCAGACATCTCGCCCAACATCTTTGAAGCGGTCAAGGGCTGCCACTTGTTTGCTGCTGGCAAGATTGAGAGCGGGCTCTGCATCTGTGCAGCCATGCCCAGCAAAGTTGTCATTCTCCGCTACAATGAAAACCTCAGCAAGTACTGCATTCGCAAAGAGATCGAGACCTCGGAGCCCTGCAGCTGTATCCACTTCACCAACTACAGTATCCTCATCGGAACCAATAAATTCTACGAAATCGACATGAAGCAGTACACGCTAGAGGAATTCCTGGATAAGAACGACCATTCCTTGGCGCCTGCCGTGTTTGCCTCCTCTTCCAACAGCTTCCCCGTGTCCATCATGCAGGTGAACGGCGCGGGGCAGCGGGAGGAGTTCCTGCTCTGTTTCCACGAATTCGGGGTGTTCGTGGATTCTTATGGAAGACGCAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACCTCTGGCCTTTGCCTACAGAGAACCCTATCTGTTTGTGACTCACTTCAACTCACTCGAAGTAATTGAGATCCAGGCCCGCTCCTCTCTGGGGACCCCCGCCCGAGCATATTTGGAAATCCCCAACCCACGCTACCTGGGCCCTGCAATCTCCTCAGGAGCCATCTACCTGGCGTCCTCATATCAGGATAAGTTAAGGGTCATCTGCTGCAAAGGAAACCTGGTGAAGGAGACCGGCACCGACCACCACCGTGGCCCATCCACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCGCCGACGTACAACGAGCACATCACCAAGCGCGTGGCCTCAAGCCCGGCGCCTCCCGAAGGCCCCAGCCACCCTCGAGAGCCAAGCACACCCCACCGCTACCGCGAGGGGCGGACCGAGCTGCGCAGGGACAAGTCTCCGGGCCGCCCCCTGGAGCGCGAGAAGTCCCCCGGCCGGATGCTGAGCACGCGGAGGGAGCGCTCCCCCGGGCGGCTGTTTGAGGACAGCAGCAGGGGCCGGCTGCCCGTGGGGGCCGTGAGGACCCCGCTGTCCCAGGTCAACAAGGTCTGGGACCAGTCTTCAGTATAAATCTCAGCCAGAAAAACCAACTCCTCATGTTGATCTGCAGGAAAACACCAAACACCCTATGGAACTCTGCTGAAGGGGACCCCAGCGCGCATCTGCTCAGCCAGCCCCCGGCGCAGCTGGACCCAGGCCCGCCTCAGCACGGACTCCCTGCAGCCAGGAGGGGCGGGGGCTGGAGCTCCTGGGAGCTGCCGGCACCTCCCTGCAGCCGCCCTCTTTGCACTTTGTTACTCTTTCAGAGCATTCATAAACTTTTGTACCTAGCTCTAGCCTGTACCAGTTCATCACAGGAAACCAACCTGGGGCTAACTACAACTACAGCGTGGTTAGAATCCTAATTAATAGCTACTTTAAGATCCTAGGGTTGGTTGGCTATTTTTTTTTTTTTTTTAAAGACAAAAGACTTCTTAATAGATTTGAATAGCACCGTATTTCCTGTTGTAGTCATTTGTAGCGAGGTCATACCATCAGGTCTCTGCTACTGAAATGTACGTAGACGAGCCCCTGCTGTCGGCTAACCTCCCGTGCTCACCTCAGTCCATCCCTGTCCAGTCCGTCCTCACAGGTGGCCCTGTCTCACCCGGGGCGACATCTTAGCCAAATGTTTACCGTCCGACTCATTGCCTTTATGGCCTTGATGACTTCCCCTCTCCCACCAGCTGAGAATGTACAGAGGCCACGAGGCCTCGCTCGGAGGCAGTGACTTAGGGCCAAGGGACCTTGAGGAGTTTTCCCTCCCCACCCCTCAGCGTCATCCCAGGCCTGCTGTCCCCGCTTTCCACGTTGCTTTGGCCAGGAAAGCATGCACTGGATTTGCTCTGAGCCCAGCCCCGAGAGGGCCTGGGTCCAGGGGCGCTCACATCCTGTCCACGACGGTGTGCTGTCCCCGCCTCCCTGGGGTGGGCAGAGATGCCGGAGCTCTGCATGGCAGTTCACTGCATGCGCTGCCCCCCGCCCCGACCTGGCTGCCCACCTCGGGTTGCTCCGCCGATGCACTAGGTCCATTCCATAGCTCCCGCCGAACCGAGACCCTCTGGGACTTGCCAACTCACCGGCCACAAGCTGCAGTCTGTAGCACTGAACAAATGAAAACCAAACGCTCAAGCCTTACGACCAGAGAAGGATTTCAGCAAACCACACCTCACACTTCCACGTCTCCCTGACTCCCTCGCGGATGACTCTGTTCACACACAACCCAGCAGGTTCTACCCCACGAAAACTGTGACTCCCCGTACAAGCCTCTCCCTAGGGCTCGACTAACACCAGGAAGTTGGAGAAGGAAACCACCCTCAACTCTCCCACCCCGGCTGGGCGGGGAAGCCCTCGCTTAGGTGCCCCCTTTCTCTCCTCCGGCGGTGTGAGGTTCCTGGCAACTGGTTAAAGAACCAACCAGAGGCTTCGCTGTTGGCAAGCTAACTAGCGGCCTTATTTCTGCCTTTAATCTCCCACCAGGCCTCTCTCGCTTCTCCATGCCTCGAACCACCAAGGCACATCCTAGGTAGGCTGACAGGTAGACCTGTTGCCACTGCAGCCAGTGAACATGACCGCGTTTCAATCCCCCGTCCACGGTTCAGCTCACTTTCCAGATTGCAACCTGGCCCGAGTCCCGGCTCCTTCCTGCTCGTCCCTTAACCGAAGTGCTTTCTTGTCTGAAATGCCCACGGCTCTTCCTCCATGTTGTCGCATCCTTGGCCAGTGTCACACTGTCGTGTTCTGTGTGTTGCTTTGTCTTCGGGGTCAGATTGCATCCCTTCCCTTTTCCAGGGCAGATCTGACTGAATGTTTGCTGAAGTTTTTTTGTCTTTTGGTCCACAAGTATTTGGAGAGGTCACTGGAAATGGTGTTCAGTCTTGGCATTTCATTTAGGATCTCCATGAGAAATGGGCTTCTTAGCCCTCAAAGTGTATATCGTGTGTCTCATTTGTGAAATGCTTCCTGCTATAGAACTAGCTCAAAGACTGTACATATTTACAAGAAACTTTATATTCGTAAAAAAAAAAGGAAATTGAATTGGTTTCTACTTTTTTATTGTAAAAGGTGCATTTTTCAACTCTTACTTTCGGTTTCAACGGTGGTAGTTGTGGACAGCCATCTTCACTGGAGGGTGGGGAGCTCCGTGTGACCACCGAGATGCCAGCAGGAAATATCGTTAAAACGAAATTGCAGTCAAAGGCTTATTAGCATAAGATTCTAGGTCTCCAAAAGTACAGGCTTTTTCTTCATTACCTTTTTTATTCAGAAAGAGGAAAAGATCACAAGGTCCACCTTGAGAGGAATGAACTCTGTTGAACAAATAATCAAATAAAGCAATGATCTAAAATGTTTGCTTTAGTGGACGACCTCTTCTTTTCTTAAAGACAGTGCGTAAAACTCCAAAGTATCGCCACTGTCAGCCTGAGCTTGTGAGCATGGCATGGGGCCGTCTTTCCTTTCGAGGATGCTTCTTCAGGGTCCGGGGGGTGGTGTGTGCGGAGAGCCACACAGGGTTAGGGCAGACCGCACTTCTGGAATTG EMBV3_43421 TGCTCATCCATGTCCTTCCCTGCCTCCAGGAAGTGCCTTACCTGTGACACCCAGAAAAGT Gene GeneID:515367|FSTL3:NM_001075710:62_cdna Constitutive 0 NULL GeneID:515367 7 GENE FSTL3 MGC139086 follistatin-like 3 (secreted glycoprotein) EMBV3_40495 CACATGCTGTGGAGGAACTAAGCCCATGCATCACAACTACTGAATCTGTGCTCTAGGGCC Gene BVV0101_001213 + 0 NULL GK000006.2:85721126-85839654 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23268 GCACCCTGAGACACAACAGACCTTCATCAGCTGGTATGCCCTGTTGTTCGGTGTCTAAGC Variant GeneID:100138035|TMCO6:XM_002689220:62_cdna 392^995 4 EMBV3_22349 GeneID:100138035 7 GENE TMCO6 NULL transmembrane and coiled-coil domains 6 EMBV3_06885 GACCCATAAGTAGACAACTAGCTGAGTGAAGTTTCCTGGGCTGTCAGTGAGTGTGTGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05270 GCAGCTCTGACCAAGCCAGACGTGCTCCATAAAGGCTATTTTCTATATTTATTGTTGGGG Gene GeneID:511682|MBTPS1:NM_001025330:26_cdna Constitutive 1 NULL GeneID:511682 18 GENE MBTPS1 MGC139300 membrane-bound transcription factor peptidase, site 1 EMBV3_17129 GGATTAACTGCTCCAACCAAAAGACACAGACTGGCTGAATGGGTTAAAACACAAGACCTG Gene BVT0102_125403 - 1 EMBV3_34354 GK000015.2:80064754-80107690 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066229 1 XLOC_040943 NonCoding TCONS_00066229 XLOC_040943 NonCoding NonCoding - 15:80075552-80076906 - TSS49972 1354 2 TCONS_00066229_3 55 0.902511078286558 1 0 0 0 0 0 0 0 0 0 0 0.000170170911650387 1.69068242664129e-06 0 0 0 3.62348425664693e-06 5.8519027550652e-05 0.000429157302112176 0.000111185463828379 0 0 0 0 1.35510237018436e-05 1.23815668512927e-05 0 0 0 0 1.43415375718924e-05 0 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 3e-54 217 95.56 0.0989660265878877 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 6e-37 159 69.42 0.321270310192024 0 noncoding 0 0 0 0 -0.0753079598051656 0.665360107932601 -0.00975113707907515 0.83930932210063 TTTGCTTGTTCTATCTCTAGTCTTTTAAGTATAATGTCAGGTTTTCTTAGGTTTGTGATTTTTCTTCCTTCCTGAGGTAAGATTTGTCACTATAGACTTTCCTCTTAGAACTGCTTTTGCTGAATCCTATATGTTTTGGATGATTGTGCTTTCATTTTCATTTGTATCCAAGTGTTTTTTTTTTTTTTAATTTTCTGTTTTGTTTCTTCTGTCATCCACTGGTCGTTTAGTAACATATTATTTAGCCTCCACCTAGTTTACAGTTCTTCTTTTTTTTTTTTCTTGTAGTTGATTCAAATATCATAGTATTGTTGTGGGGAAGATGCTTGGTGTGATTTTTATTTTCTTAAATTTACTGAGGTTTTCTTTGTGGCCCAGCATGTGGTGAATCTTGGAGAATGTTCCCTTGTGCACATGAGAAGAATGTATATTCTGCTACTTTTGAATGGAATGCTCTATAAATATCAATTAAGTCTTCCTGGCTTAACATGTTATGTAAGGTCTGTGTTTCCTTATTTGTTTGCTGGATGATCTGTCCATTAATGTATCACTGTCATTTTCCCTTCTCCTTTTCTTGGCTGTATTTGACTTACGTATTGGGATGCTCTTATGATGGATGCATACATGTTTAAAATTATTACATCTTCTTCCTGGATTGATCACTTAATCACTATGTAGTGTCCTTCTTGTCTTTTATACTGGTCTTTATTTTAAAGTCTATTTTGTCTCACATGAGTATTGCTACAGCAACTTTCCTTTGATTCACATTTGCATGGAACTCCCCTTTTTCATATTTTCACTTTTAGTCTGTATTTGTCTGTAGGTCTGAAGTGGATCTCTTAAAGACAACATATATACAGGTCTTGTGTTTTAACCCATTCAGCCAGTCTGTGTCTTTTGGTTGGAGCAGTTAATCCATTTATATTTAAAGTAATTATTGATATCCATGTTCTTATTGCCATTTTTGGTAACTGTTTTGAATTTGTTTCTGTGGGCCTTTTTTCTTCCTCTTTTGTCCTCTTCTCCTGTGATTTGATGGCTACCTCTAGTGTTGTGTTTGAGTTCATTTTTCTTTATCTGTGTGTGTATCTGTTGTATTGGGTTGGCCAAAGTGTTCATTTGGGTTTGTCTGAAGACCTGAATGAACTCCTTAGCCAACCCAATAGATTTTTGGTTTCAGGTTACCATGAGGTTTTGATATAGAAGTCTGTATATAAACAAGAGGGTGTTTGTTATGACCAGTGCATTTTCTTGGCAAAACTCTATTAGTCTTTGCCTTGCTTCATTCTGTATTCCAGGGCCAAATTTGCCTGTTACTCCAGGTGTTTCTTGACTTCCTACTTTTGCATTCCAG TCONS_00062538 TCONS_00062539 . 5' 10800 TCONS_00062538 TCONS_00062539 . 5' 10800 EMBV3_11901 GCTGTTTGTAAGATCAACAGACAAGCGGCTGGGAAGATCTTGCTGCTCACAGAAATCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28153 GTCAGAAAAACAGACCCTGTGCAGTGTGGAGAACCAGAGCTAAAAGCTGCAAAATACGGC Gene GeneID:511234|NOSIP:NM_001075502:181_cdna Constitutive 0 NULL GeneID:511234 18 GENE NOSIP MGC129010 nitric oxide synthase interacting protein EMBV3_05865 CACCAGGCAGAGTGTCAATAAGGTGATATTGGAATTGAACTATCTCTAGATTAAGTAGGC Gene BVV0101_011079 + 0 NULL GK000030.2:126641998-126856699 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04794 TCCTCAGTGGAGGTAAAGACATCAAGAAGGATTCTGTCCAACCTGAAACGCCCCAACCCA Gene GeneID:514682|PRIM2:NM_001079594:122_cdna Constitutive 0 NULL GeneID:514682 23 GENE PRIM2 PRIM2A primase, DNA, polypeptide 2 (58kDa) EMBV3_39807 GCGGCGGCGAAGTAGCAGCACGGAGAGCTGATTCATCTGAAAACTACATCAAGACAAAGA Variant GeneID:540802|ASB3:NM_001076927:167_cdna 179^387 4 EMBV3_10739 GeneID:540802 11 GENE ASB3 MGC142427 ankyrin repeat and SOCS box-containing 3 EMBV3_39947 ATTACAGTGAACTGCACGACTCTTCTCCAGCACCTGCGGGAAGGCCTTCTCCAGGCCCTG Variant GeneID:504492|SNAI1:NM_001112708:844_cdna 171^636 1 EMBV3_01504 GeneID:504492 13 GENE SNAI1 NULL snail homolog 1 (Drosophila) EMBV3_32381 ATATGCCGCCGCCAGACCGTTGTACAGGCTCTGTTCCAGTGTTCGGGTCACTGTAAAATA Gene GeneID:522380|TCHP:NM_001164026:204_cdna Constitutive 3 NULL GeneID:522380 17 GENE TCHP NULL trichoplein, keratin filament binding EMBV3_00112 TCCGTGAGGGCCTCCAACCATATATCCAGAAAGGTTGCAACGAGCTCATTACCAAGATCG Gene BVT0102_017593 + 0 NULL GK000025.2:20353916-20377459 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144728 TCONS_00144727 TCONS_00144731 TCONS_00144730 TCONS_00144732 1 XLOC_088632 Coding TCONS_00144732 XLOC_088632 NonCoding Coding METTL9 25:20352262-20358781 o TSS108598 2505 7 TCONS_00144732_3 57 2 0.615986498926051 9.15716890080439e-05 7.27157633692774e-05 6.77348609292293e-05 4.95426882259626e-15 9.33893913199597e-05 0.000422927554123726 8.38351351780564e-09 6.9869939308343e-06 7.46090776143819e-05 5.203201161855e-05 0.000107775331478772 1.52111876503822e-05 1.18206922477355e-12 1.75866086297546e-05 8.10657945701811e-05 0.000888357588220415 0.00656973100749468 5.30826279579681e-05 1.69161593038117e-168 4.1314279261713e-16 1.23387046994041e-05 0.000526218962373768 2.0647910733162e-19 0.00015035977491691 0.000141055995049084 0.000145227178539342 2.09974647063877e-13 6.73440680029785e-05 1.09546171423303e-05 2.5917995377105e-14 XM_005224772.1 METTL9 PREDICTED: Bos taurus methyltransferase like 9 (METTL9), transcript 0.0 4064 100.00 0.899001996007984 NM_016025.3 METTL9 Homo sapiens methyltransferase like 9 (METTL9), transcript variant 0.0 2100 81.19 0.89940119760479 0 noncoding 0 0 0 0 0.0595143836680558 0.79886760669753 -0.0215041974213345 0.696692420009979 AGTCAAGTCACTGGAGAAGACCAGGCTTCCTGCGTCTTCAGCCAAGGGGCTTAGCCTCTCTCCTAAGGCTGGTGGAAACGGCTTTATAAGGTGGCAAGTGGGATAAACCATCGGAAATTTTGGAAATCAAGGGACAGAATTGGGAAGAACAAGTGAATAGTCTGCCTGAAGTTTTCAGAAAAGCTGGTTTTGTTATCGAAGCTTTCACCAGACTGCCATACCTGTGTGAAGGTGACATGTATAATGACTACTACGTTCTGGATGATGCTGTCTTTGTTCTCAAACCCGTATAAACAAGTGGAGGTTGGGGTCTTCAGAGTCCAGCCCAAGAATGTACACTCCGGAAGAGGATCTGCAAGTTCAGTTATGTGAAGGGAGGACCTTTGGGGACTGCCATTCTAAATATCATGTAGGAATTTTAAAAGCCAAATTACTAATTATTGCTTTGTAGTGTGTAAAAGGAATGTTTTTTAAAAAAACAAAAAACCAACTCTTTGAGGATTTTTATCAACTCTTTACTCAGTAATGCAGGTCACACTCCGATTATGGAAAATATTTTTTATACTTAATTGCAGTAGGGACTCATTCCCAAAGCAATAGTCATGACTTCACAGGGAACCAGTAAATGTGGGTTGTTTGTAATAAAATGAAGACTGGGCAATAAAGCTGTCTTTCCAGTTGCAAATATTGGTTATAAAGTATAGCCACTGATCCTCTTTCATGTTTAGAAATTCTGTCATTATTCCAGAAAATGTTTTTAATCATGCTAATAAACTTTTTTTGGAGGTGACTTTGGCATCATGTTGGAGTTACTATAAGGCTTCCCAAGCATCTTTAATTGCTTTGCTTCAGGTGTGCCCAAGTAGTAGCATATATGAAAGAAAGATGAAGTAGATGAGAATATATGGTAAAGGAACGCTTTAGACTTGGGGGTGGGGTGATTACTGCAAATTGTGATGAACACAAGCAACCCAGACTAACTCTCAAAAGAACAGCCTCATTCAGATGTACTTCAGGGACTACCCTCACTCCCCAACTCATATATATATGTTTGTTTTTTTTTTGAAATTCAGAGCAGTGGGTTCTGACTTTGTGGTAACTTGTGTCCTACACTCAGAATTTTGCTTTTCTGGACAATCTCAGGTTCTCAGAATTGGAACATTCAGTTTTGTCTACTGACAAGAACACCACCTAATATTCTTTCAATTCAGCTTCTTAACTCTGTCCTTGTATATACCTCTTTCACAGAACTTGGCTCTTCTCGAAATCCTTAACTGAGTTTATAGTTTGCCAGGAGTATGGTTTGAGAAAACCATGTCAGACTCATGCATTCTAGAATCCGTGAGGGCCTCCAACCATATATCCAGAAAGGTTGCAACGAGCTCATTACCAAGATCGATAACCATTGTGGATGTTCCAAAGAGCAGAGCACTTAACCCAAAATCTAAAATCTCAGTAATCATAGAGATGCCAATTTGAGATCATGCCTATTAACAATATGTTATTCTCACAACTTGCTTTTGTCAGCCAGGTGTTACATTAACTATTCTCATCTATATGCTCATAGAAGTCATCAAATCAGCACATTTACTGCAGCACCTGGGCATAAAGGAGAATTAAAGCCTTGAGAAGAATGACTTTATTATTCAGTAAGAACAGCATTCCCACGTCCTGACACCAGTATCTTCCACCGTTATTGTGTAGTCGTAATAAGAGTTGGGTTATGTGATTTTTGCAAAAGCGTTATTGGTGCTTTCAAATGCTTTTTTCCCCCCCAGGAATTCAAATAAGTGAAGTGCAAATACTTGGCACCTTAGATTGTAAAAATAGAGGAAATGAGTAAATTTAATGTAGTTCTTGTACAGTTGAGTTTTGCTTCTTTATAAGCTGTCATCATCAGGGGTTGCTGTTTAGACTGCTGAACAAGAGTGCACGAGTGACAGATGCTCAGAGGCAGGTTGTTGCAAAGTGTTTCATTAACTTTGAGAATTAATTTGATAGTCTATTTGGAAAAAAAAAGAAACAAACCTCCTTCTTTTCCCCCCAAAATCAGAGAAAGCACATACATTTATGCATTTTAAAGACAAATACTTTCTCAAAATCTGAGGTTCTCTGAAAATCAGCTTCTCAAAAGTGCCGTTTTTTGGTGAAAATTTAAACCAACAAATCCGCTCACATTTCACGCCTGGTCTTGAAAGTCTTGGTGGTATATCATCATTCCACTAGATGGCAGTGTTGCTTACTGAGCGTCAATGACTTTATTTCCCCTTAAATGGAATCATGTTTTTTCTTTTTTTCTCCCCAAAGTATTGATACAATAAACTGCCTTCTTGTCTGCACCATTCCTTGTGTAAGTGTTTCATATCAAGTTAAGGTTGTACTGGAGGAATTAAGAAGACCTCTATTTGCAGTCAAAGCAAGCTAGCCAGTTGACCTTAAAGGTCACAGAGAAAGGAAATGTAAGCTGCACCTGTGAGGCAAAGCTCTTTGCACCTGCAGCTGTAA TCONS_00144731 s 5' 0 TCONS_00146478 TCONS_00146477 r 3' 1582 EMBV3_23582 GTGATCAGTTTGAATCTATTTGGTGGGATGAGAGAGGCACATGTATAGTGATCCACGAAG Gene GeneID:781231|LOC781231:XM_002684009:3_cdna Constitutive 0 NULL GeneID:781231 Un GENE LOC781231 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_01229 CTATCCTTCCGATTTGCTACTTTCTGGGCTGGCCAGGAGGGTGTTTCCAGGAGAGTTTGT Gene GeneID:613736|MED22:NM_001034742:199_cdna Constitutive 0 NULL GeneID:613736 11 GENE MED22 SURF5 mediator complex subunit 22 EMBV3_27094 AGGTTCATTGAGGAAACCAAGGGAACTGAGCCCCAGGATAAAGACTCTATTAGCCTTTTC Variant GeneID:497208|DNAH11:XM_002686722:81_cdna 157^219 1 EMBV3_02583 GeneID:497208 4 GENE DNAH11 Bv1 dynein, axonemal, heavy chain 11 EMBV3_37454 TCCTGGAGCTAGACCCACCTCCCAAGGATAATGAAGATCTGGGCACTCGAAAGCCTGTGA Gene GeneID:282166|CATHL4:NM_174827:2_cdna Constitutive 0 NULL GeneID:282166 Un GENE CATHL4 NULL cathelicidin 4 EMBV3_13677 TTCAATCCTGGGGACGAAGAAGGAAGAAGAACAAAGGCAGGAATATAGAGGGCTTCCCCG Gene BVV0102_188229 + 0 NULL GK000019.2:39431773-39447203 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093719 1 XLOC_057239 NonCoding TCONS_00093719 XLOC_057239 NonCoding NonCoding LOC100848896 19:39432318-39442865 j TSS70246 910 2 TCONS_00093719_1 79 0.484615384615385 4 0.914090650483596 0.000275072732555821 3.77564789976254e-141 2.22619446036179e-68 0.000129210228191939 1.59692899664816e-25 3.9283590864785e-06 4.25841485855738e-05 0 0 0.000140466524085967 5.97465890564073e-20 4.71495900241565e-05 9.5451368795315e-29 0 1.96256178083195e-29 2.75734244120195e-48 4.78505463630817e-170 0 5.06587613469342e-16 0.00153489948775913 0.000565922592992911 0.000230108370270579 1.44952828868959e-44 0.000461660164391831 1.46595034521723e-05 8.87396114476259e-05 4.50338631255425e-64 1.55427485652536e-08 7.93602208334081e-115 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 5e-36 156 70.62 0.325274725274725 XM_005275822.1 LOC101929046 PREDICTED: Homo sapiens uncharacterized LOC101929046 (LOC101929046), mRNA. 1e-11 75.2 79.27 0.0802197802197802 0 noncoding CGGGAGTCGACCCACCGCTTTAGAAGCCTGGCGCGGGGCACGACGGGACGCCCCCGGAAAGAGGCGGAGCCGTGTCCAGGCTGCGGTTGAGAAAGCGGCGTCACTCGGAGGGGCGTGTTGAGGGTTTCGCGGGCTCGAGCGGGGGAGGGGGGACCGTTAAAGCCCTGCACCGCGCCCACAGGAAGCTGCTTTAATGGCTAGGCCTACTTGGTACCAGGCTCTCTGCTGGGAAGGACCTTGAAGACCGTGCGGTTCAACTTGCAATTTGCTGATGTGGAAACTGAAGCCCAGAGAGGCGTTCTCCACACTAGCACCCATGTGTACCGTTGGACTGATCGAGGCAGCTGTATCTCTTCGTCCTTCAGAAGTGCTCTCCGTCCTAGGCCTGTGCCTGCTTGGCGTTCCCTCCTCATCTCTCCCAGTCCTCAAGTCACGCACAAAAAGGGATTCAATCCTGGGGACGAAGAAGGAAGAAGAACAAAGGCAAGAATATAGAGGGCTTCCCCGGTAACTCAGTGGTAAAGAATCCACCTGTCAGTACAGGAGACATGGGTTTGATCCTGGTCCTGGAGGATCCCACATGCCACGGGACGGACAACTGGGTGCATGAGCCACATTTACTGAGCCAGCACTGTAGAGCCCGTGAGCAGCAACTACTGAACCCCAGTTCCACAACAAGAGAAAACCAAAATAATGAGAAGCCCAAGCAGCGCAACCAGAGAGTAGCCCCCACTTGCCGCAACTGGAGAAGACGCAGCAACGAAGACTCAGCACAACCATAAATAAATAAAATCTTGAAATGTCTGCAGACCTTGCTAATTGTCCCCTGGTAGCAAAAATTGCTCTCCTACCCCCGCAGTTGTGAACCACTGCTCCTTGACATCTAATAAATGCCTGTATTCCATATAGT EMBV3_09698 GGACAAGTCATAAAAGGCCTAGACATTGGGATGATGGATATGTGTCCTGGAGAGAAGCGA Gene GeneID:509422|FKBP7:NM_001100330:17_cdna Constitutive 1 NULL GeneID:509422 2 GENE FKBP7 NULL FK506 binding protein 7 EMBV3_30690 CGGGACTTTGCTGGCCCCTACTTTGTGTCGGTACTGGAAGCTGGACCCCGCTCAGGTCTA Variant GeneID:614627|TMEM222:NM_001035451:272_cdna 186^367 2 EMBV3_14173 GeneID:614627 2 GENE TMEM222 C2H1ORF160 MGC129106 transmembrane protein 222 EMBV3_41594 ACTCAGTGTTTTCACCTCTTTCCTACTTTTGTACGGGTCATGGGAGTGGTGAGGGTGGAC Gene GeneID:616243|PHYHIP:NM_001076415:9_cdna Constitutive 0 NULL GeneID:616243 8 GENE PHYHIP MGC139493 phytanoyl-CoA 2-hydroxylase interacting protein EMBV3_39555 CCGTAAGTTGGGCTCAAGGGAGACTGACCCCTAACCAAGTCACCTGATAAACTCTAGGGA Gene GeneID:505427|MAP3K12:XM_002687238:108_cdna Constitutive 1 NULL GeneID:505427 5 GENE MAP3K12 MGC151798 mitogen-activated protein kinase kinase kinase 12 EMBV3_19606 GGTGTTTGCAAGTCACTAATCCAAGCGCCTTCTACCCAGAATCAAATCGGTCATAGTTTC Gene BVV0102_121408 + 0 NULL GK000020.2:39486308-39760049 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117157 1 XLOC_071323 NonCoding TCONS_00117157 XLOC_071323 NonCoding NonCoding - 20:39515474-39516748 - TSS87625 1274 2 TCONS_00117157_1 59 1 0 0.000662129259414123 0.0016326732406012 0.000203384949930708 0.000299836285042276 0.000519294531278466 0.000993939441550457 0.000119014842238439 2.78558406792658e-05 6.81252599641634e-05 1.61479065677768e-06 1.79684845323346e-06 9.82331271688252e-05 0 0.000162460924876226 0 0 0.0107380670321644 7.87785738460228e-05 9.00588324169242e-05 0.000225791111941305 0 0 0 0 0.000484015579638018 0.000105073701142328 0.000699051082401292 0 1.1431578259564e-05 0 0 noncoding 0 0 0 0 -0.610259814398679 0.164828295025843 -0.0897746207399632 0.144157220702429 GCTCCGACCGCAACCTGCGGGAGGTGCTCCCGGCCCGCGCGCCCCAAGCGTCCGCAGCCGGCTTGTAGTTTTCCGCGGATCGTGGGATTCTGCCCAGTGAATCTGTTTGCATCATCGTCACCTGAAGCTAATGGAAACCACCGGTGTTCCGACCCCCGGGATTTTAGAACGGATGAGATACTGAATAGTATTCATTTCTGGTTAACGTCCAAAGTCGTTTGTGGTCGTGTTGGTGTTTGCAAGTCACTAATCCAAGCGCCTTCTACCCAGAATCAAATCGGTCATAGTTTCCAAAATTATTGAACAGAAAGGAAACTAAAACCTGCTCAGAGTCTCTGGATTGAACCAGTTGGTCGGAGCGACTGTTTCCTAACGTTCATCAGGTGGCAAGAGAAAACTACCAGCGTTCAGCGCTGCTCGCGAGTTCGGAAGGAGACGCCTACTGTCTGAACTGAGAGGCACCGTGCGGAACGCCCTCCCTGTGGGGTCTGGAATGCCGAGGGGCCCGGCCTCAGAGCCCCGGAGCTCGTCTCCCTTCCCCACCCCCCTGAGCCCCCTGCGTTTGAATCGTAATGGACTCTTGCTTCAACTCCCAAGGATTTCAAAGCTCTCCTCCTCTCCATTAATTTGGGACGCCTTTGCGATTCATTCTGGTCATGCCAACCAGCTATGACTTTAAAAGTCTTTTCACCAAAGCCCCTGTGTTCTGTTAACTCCAAGTCCTTTGCAGGAAGCTTTCTGGAAATAAATATGTGGTATGAGTCCCTTTTTGGTGAGATCAAATCTAAAGCAATTGAATTTTTTTAAAAATCCAATACAAATGAAATTCATCTAAGTTCAGTTTATAATGTCTTAAACAGATCCCCACGACTACCAGTCGGACTTTATCTGTACCCCTAGCCCCCCACTACCACCACCAGCAGCAAGCCAAAGGAACAGCCTGTCTTAGCTTTGACAGGTGACATCAGAGACAACTAGCTGCATGGTCTTCCCTTCCTAAATCATAGGTCAGCAATTCCTTAGAGAAGTGATGAATAGCTGGTTTAAAGCAAGATGTACACTCCTCTTCCTGTCTTTTATCCCTCTCAAATAAAATCACCATCTAAAAGACACCTGAACTGATAAACTTCTTTTTGGTTTAATGCTGGCAATTTCCACAGTACAGTTATTCATTGCAGTTCACATGAATGGTGTAATGTAGGGTATTTATTGGGAACAATACTGCCATGTGTTGGTTTTCTGTTCCCCTTTCAGCAGGTCAGTCTCGCTGAACA TCONS_00115079 . 5' 204 TCONS_00115079 . 5' 204 EMBV3_41558 AGACAATGCTTCTGTGTCCCTCTGAGTGTCATTTGATTGGGTCTGTGCGTCTTGGAACAG Gene GeneID:286802|VSX1:NM_174767:11_cdna Constitutive 0 NULL GeneID:286802 13 GENE VSX1 MGC148352 RINX visual system homeobox 1 EMBV3_16002 CAGAAACAGACTCACAGACTTAGGGAAGGAACTTATGAGTACTGGGGTTGGGAGGAAAGG Gene BVT0102_116808 - 0 NULL GK000001.2:123060131-123231175 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40333 ACAACAAGCCTACTCATACTACCAAACCTATAACCAATTGCTGATCTCCTGTGTAAAGCA Gene BVV0102_031078 + 0 NULL GK000002.2:118598018-118622219 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106359 TCONS_00106369 TCONS_00106345 TCONS_00106347 TCONS_00106370 TCONS_00106372 TCONS_00106352 TCONS_00106358 TCONS_00106363 TCONS_00106346 TCONS_00106353 TCONS_00106368 TCONS_00106341 TCONS_00106348 TCONS_00106350 TCONS_00106339 TCONS_00106342 TCONS_00106364 TCONS_00106338 TCONS_00106355 TCONS_00106362 TCONS_00106344 TCONS_00106357 TCONS_00106367 TCONS_00106366 TCONS_00106374 TCONS_00106349 TCONS_00106354 TCONS_00106351 TCONS_00106371 TCONS_00106365 TCONS_00106360 TCONS_00106343 TCONS_00106340 TCONS_00106373 TCONS_00106356 TCONS_00106361 1 XLOC_062776 Coding TCONS_00106356 XLOC_062776 Coding Coding TRIP12 2:118618732-118773495 j TSS78300 10040 1 TCONS_00106356_4 2038 43 0.93540403975136 0.00270612610654672 0.00598687604441011 0.00263308033909565 0.00199995041687748 0.00206887786830574 0.00177999574760466 0.00100101456114325 0.00371599518240555 8.44590560179876e-06 0.000195724654194227 1.07532561576523e-33 1.46087204596598e-21 1.32221610614359e-06 1.06914909738981e-05 0.000333927308262094 1.33607194351182e-08 3.00845804171023e-32 2.65517618126135e-16 0.00407510672568293 4.07089303645216e-07 7.79463780417748e-05 9.54601760276519e-07 1.73673160147695e-05 0.000406425715910146 0.00331217643876073 0.00186891613026663 2.35760095180659e-08 5.21732910299345e-07 5.43707610761032e-08 4.76662067822758e-08 XM_005202926.1 TRIP12 PREDICTED: Bos taurus thyroid hormone receptor interactor 12 (TRIP12), transcript variant X2, mRNA. 0.0 1.006e+04 100.00 0.555478087649402 NM_001284215.1 TRIP12 Homo sapiens thyroid hormone receptor interactor 12 (TRIP12), 0.0 1.046e+04 85.83 0.900697211155378 TCONS_00106356_4 sp|G5E870|TRIPC_MOUSE TRIPC_MOUSE E3 ubiquitin-protein ligase TRIP12; 0.0 3843 94.05 0.999509322865554 2 coding 1 1 1 0 -0.699615293487834 0.0909536810837109 -0.297690833817235 0.031585801273855 GGCGGGAAAGGAGCGGGAGGCGTTGTGAGGAGGCCAAGCTTGCCGGTGAATGGTAGTGTCTAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCTAATAACAATCCAGGGGGGTCACTGCGACGTTCACAGAGGAACACTGCCGGGGCCCAACCACAAGACGACTCGATAGGAGGAAGGTCACATTTAGGGCAGGCAAAACATAAGGGATATAGCCCTCCTGAGAGTAGAAAATCTAATTCTAAGGCACCCAAAGTGCAGTCTAATACTACTTCTGAACTGTCAAGGGGACACCTTTCTAAAAGAAGCTGCAGTTCGTCATCTGTTGTCATAGTCCCACAACCAGAGGATCCAGACAGAGCCAATACTTCAGAAAAGCAGAAAACGGGGCAGGTGCCTAAGAAAGACAATTCTCGAGGAGTGAAACGCAGTGCTAGTCCAGACTACAACAGGACCAATTCTCCTAGCTCTGCCAAAAAACCCAAAGCACTTCAGCATACTGAATCTCCCTCGGAAACGAGTAAGCCACATAGTAAGTCAAAGAAGAGACACTTAGACCAGGAGCCACAACTGAAATCTGCACCGTCTCCATCCACGAGCAAGGCTCATACCAGAAAGAGTGGGGCCGCTGCTGGTTCGCGGAGTCAGAAAAGAAAGAGGACAGAGAGTTCTTGTATAAAGAGTGCTTCTGTGTCTGAAGCCACTGGTGCCGAAGAGAGATCTGCAAAACCTACCAAGCTGGCTTCAAAATCGGCCGCCTCAGCCAAAGCTGGGTGTAGCACCATCACCGACTCGTCATCCGCTGCCTCGACCTCCTCCTCGTCCTCTGCCGTCGCCTCGGCCTCCTCTGCTGTTCCACCAGGTGCCAGGGTGAAACAAGGAAAAGACCAGAACAAGGCCAGGCGTTCCCGCTCAGCATCCAGTCCCAGCCCCAGAAGAAGCAGCAGGGAAAAGGAACAGAGGTCTTCTAAGTCAGAAACATCCAAACCTGGACCTTCTGGATTACAGGCCAAATTAGCAAGTTTAAGAAAATCTACCAAGAAGCGCAGCGAATCCCCGCCTGCCGAGCTCCCCAGTTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCCTGCGCTAGTGCCAGTCGGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGACAGGAGAAGATGGCCGACCCTGAAGGCAACCAGGAGACGGTGAACTCTTCAGCTGCACGGACAGACGAGACTCCCCAAGGAGCAGCAGCCTCTAGTTCTGTTGCAGGGGCTGTGGGCATGACCACCTCTGGGGAGAGCGAATCTGATGACTCCGAGATGGGACGGTTACAAGCTCTGTTAGAGGCCAGGGGTCTTCCCCCTCACCTGTTTGGTCCTCTTGGTCCTCGGATGTCACAGCTTTTCCATAGAACAATTGGAAGCGGAGCTAGTTCTAAGGCCCAGCAGCTTCTGCAAGGACTACAAGCAAGCGACGAAAGCCAGCAGCTCCAAGCCGTTATTGAGATGTGTCAGTTACTGGTTATGGGGAATGAGGAGACGCTGGGAGGGTTTCCTGTCAAGAGTGTAGTTCCAGCTTTGATAACATTGCTGCAGATGGAACATAATTTTGATATTATGAACCATGCTTGTCGAGCCTTAACATACATGATGGAAGCACTTCCTCGATCATCGGCTGTGGTAGTTGATGCAATTCCTGTCTTTTTAGAAAAGCTGCAAGTTATTCAGTGTATTGATGTGGCCGAGCAGGCCTTGACGGCCTTGGAGATGTTATCACGTAGACACAGTAAAGCCATTCTCCAGGCGGGTGGTTTGGCAGACTGCTTGCTGTATCTAGAGTTCTTCAGCATAAATGCCCAAAGAAACGCGCTAGCAATTGCAGCCAATTGCTGCCAGAGTATCACGCCAGATGAATTTCATTTTGTGGCGGATTCCCTCCCATTGCTTACCCAAAGGCTAACCCACCAGGACAAAAAGTCAGTAGAAAGCACTTGCCTTTGTTTTGCACGTCTAGTGGACAACTTCCAACATGAGGAGAATTTACTCCAGCAGGTTGCTTCCAAAGATCTGCTAACAAATGTTCAACAACTGTTGGTAGTAACTCCACCAATTTTAAGTTCTGGGATGTTTATAATGGTGGTTCGCATGTTTTCTCTGATGTGTTCCAATTGTCCAACTTTAGCAGTTCAACTTATGAAGCAAAACATTGCAGAAACGCTTCACTTTCTCCTGTGTGGTGCCTCCAATGGAAGTTGTCAGGAGCAGATTGATCTTGTTCCACGAAGTCCTCAAGAACTGTATGAACTGACATCTCTGATTTGTGAACTTATGCCATGTTTACCAAAGGAAGGCATTTTTGCAGTTGATACCATGCTGAAGAAAGGCAATGCACAGAACACGGATGGGGCCATATGGCAGTGGCGGGATGACCGGGGCCTCTGGCACCCCTATAACAGGATAGACAGCCGGATCATTGAGGCAGCCCATCAGGTCGGTGAGGATGAGATAAGCTTGTCCACTCTGGGACGAGTTTATACTATTGATTTTAATTCTATGCAGCAAATCAATGAGGACACGGGAACAGCACGTGCCATTCAGAGAAAACCTAACCCCTTAGCCAATACTAACACTAGTGGATATTCAGAGTTAAAGAAGGATGATGCTCGAGCACAGCTTATGAAAGAGGATCCGGAACTGGCTAAGTCTTTTATTAAGACATTATTTGGTGTTCTTTATGAAGTGTATAGTTCCTCAGCAGGACCTGCGGTCAGACATAAGTGCCTTAGAGCAATTCTTAGGATAATTTATTTCGCGGATGCCGAACTTCTAAAGGATGTCCTGAAAAACCATGCTGTTTCAAGTCATATTGCTTCCATGCTATCAAGCCAAGACCTGAAGATAGTAGTTGGAGCCCTTCAAATGGCAGAGATCTTAATGCAGAAGTTACCTGATATTTTTAGTGTTTACTTCAGAAGAGAAGGTGTAATGCATCAAGTAAAACACTTAGCAGAATCTGAGTCATTGTTGACAAGTCCACCAAAGGCATGTACAAATGGGTCCGGATCCTTGGGGTCCACGCCATCGGTCAACAGTGGAACAGCCACGGCCGCCACCAATGCCTCGGCTGACCTGGGGTCCCCCAGCTTGCAGCACAGCAGAGACGATTCTCTAGACCTGAGCCCTCAAGGTCGATTAAGTGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGATCAAGAAGGCCAAAGTATTCACCTCCGAGAGATGATGACAAAGTAGACAATCAAGCTAAAAGCCCCACTACTACTCAGTCACCTAAGTCTTCTTTCTTGGCAAGCTTGAATCCAAAAACGTGGGGAAGGTTAAGCGCACAGTCTAACAGCAACAACATTGAACCAGCACGAACTGCGGGAGTTAGTGGTCTTGCCAGGGCCGCCTCAAAGGACACCATCTCCAATAATAGAGAAAAAATTAAAGGTTGGATTAAAGAGCAGGCACATAAATTTGTAGAGCGTTACTTCAGTTCTGAGAACATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGCTACTGAACAACTCAACCTCCAGGTGGATGGTGGAGCTGAGTGCCTTGTAGAAATCCGTAGCATAGTCTCAGAGTCTGATGTTTCATCGTTTGAAATCCAACACAGTGGATTTGTGAAGCAACTGTTGCTTTATTTGACATCTAAAAGTGAAAAAGACGCTGTGAGCAGAGAGATCAGATTAAAGAGATTCCTTCATGTATTTTTTTCTTCTCCACTTCCTGGAGAAGAGCCCATTGAACGAGTAGAACCAGTGGGTAATGCACCTTTGTTGGCATTAGTTCACAAAATGAACAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAAAGTGCATGACTTTCCCAGTGGAAATGGGACAGGAGGCAGCTTCTCTCTCAACAGAGGATCACAGGCTTTAAAATTTTTCAACACACATCAGTTAAAATGCCAGTTACAAAGACATCCAGACTGTGCAAATGTGAAGCAGTGGAAGGGTGGACCTGTCAAGATTGACCCCCTGGCTTTGGTGCAGGCTATTGAGAGATACCTTGTAGTTAGAGGGTATGGAAGAGTAAGAGAAGATGACGAAGACAGTGACGACGATGGTTCTGACGAGGAAATAGACGAATCTCTGGCTGCTCAGTTCTTAAATTCCGGAAATGTGAGACACAGGCTACAGTTTTACATCGGGGAGCATTTGCTACCGTATAACATGACTGTGTATCAGGCAGTACGGCAGTTCAGTATACAGGCTGAAGATGAACGGGAGTCCACGGATGACGAGAGCAATCCTCTAGGAAGAGCTGGTATTTGGACGAAAACTCATACGATATGGTACAAACCTGTGCGAGAGGACGAAGAAAGTAATAAAGATTGTGTTGGTGGTAAAAGAGGAAGAGCCCAGACAGCTCCAACAAAAACTTCCCCTAGAAATGCAAAAAAGCATGATGAGCTGTGGAATGATGGAGTGTGCCCATCCGTATCAAATCCTTTAGAAGTTTACCTCATACCCACAGCACCCGAAAATATAACTTTTGAAGACCCGTCATTAGATGTAATTCTTCTTTTAAGAGTTTTACACGCCGTCAGTAGATACTGGTATTACTTGTATGATAATGCAATGTGCAAGGAGATTATCCCAACTAGTGAATTTATTAACAGTAAGTTGACAGCAAAAGCAAATAGGCAGCTTCAAGATCCTTTGGTAATCATGACAGGAAACATCCCTACATGGCTCACTGAACTAGGAAAAACCTGCCCATTTTTCTTCCCTTTTGATACCCGGCAAATGCTTTTCTATGTAACTGCATTTGATCGGGACCGAGCAATGCAAAGATTACTTGATACCAACCCAGAGATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGCACCTAGATTGGACAGAAAAAAACGTACTGTGAACAGAGAGGAGCTGCTGAAACAAGCGGAGTCTGTGATGCAGGATCTTGGCAGCTCACGGGCCATGTTAGAAATCCAGTATGAAAATGAGGTTGGCACAGGTCTTGGGCCTACACTGGAGTTTTATGCACTTGTATCTCAGGAACTGCAGAGAGCTGACTTGGGTCTCTGGAGAGGGGAAGAAGTAACTCTTAGCAATCCAAAAGGAAGCCAAGAAGGGACCAAGTATATTCAAAACCTCCAAGGCCTGTTTGCACTTCCCTTTGGTAGGACAGCTAAGCCAGCTCATATCGCAAAGGTTAAAATGAAGTTTCGCTTCTTAGGAAAACTAATGGCCAAGGCTATCATGGATTTCAGATTGGTGGACCTTCCCCTGGGCTTACCTTTTTATAAATGGATGCTCCGGCAAGAAACTTCGCTGACGTCACACGATTTGTTTGACATTGACCCAGTTGTAGCCAGGTCAGTGTATCACCTCGAAGACATCGTCAGACAGAAGAAAAGACTTGAACAAGATAAATCCCAGACCAAAGAGAGTCTCCAGTATGCATTAGAAACCCTGACTATGAATGGCTGCTCCGTGGAGGATCTGGGATTGGATTTCACTCTGCCAGGGTTTCCTAACATTGAACTAAAGAAAGGAGGAAAGGATATACCGGTCACCATCCACAATTTGGAGGAGTATCTAAGACTGGTTATATTTTGGGCACTAAATGAAGGTGTTTCCAGACAATTTGATTCATTTAGAGATGGATTTGAATCAGTCTTCCCACTCAGTCATCTCCAGTACTTCTACCCAGAAGAACTGGATCAGCTTCTGTGTGGTAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGGAATGCTGCAGGCCAGATCACGGTTACACTCATGACAGTCGGGCTGTGAAGTTCTTGTTTGAGATTCTCAGTAGTTTTGACAATGAACAGCAGAGGTTATTTCTCCAGTTTGTGACAGGTAGCCCACGATTGCCTGTTGGAGGCTTCCGGAGCTTGAATCCACCTTTGACCATTGTCCGGAAGACCTTCGAATCAACAGAGAACCCAGATGACTTCCTACCCTCTGTCATGACCTGTGTGAACTATCTTAAGTTGCCGGACTATTCAAGCCTCGAGATAATGCGGGAAAAGCTGTTGATGGCTGCGAGAGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCACATCAGGAAGCGTGGTGTCTGCCTGTTAACAGCAAAAGACAGCAATCATGATTTCTTTTCTAAGTGTGTCACCTGAGTCAAGGAAACATGTTACGCCTTCCCGTTGTAGGAAAATGGCTTGCAGAATATAAGAGACACTTGGTTCCTCTTCATTAATGGCCCCATGGACTTAAAGTGATCAGGCCCTAAAACGTTGTTGTGATGAGGTTTCTTTAGCAAGTTCTTGTTTAAATTATCATTTATTTGACGAGTGAAGTTTTTAACTTGCTTTGCTGTGTGAAATTTAAAAAAGGGATGTTTTTCCAGGCTGAAACAATAAATGTCGCTGTGCAGTTTAATTCTGGGCTGTGTGTATCCATCTAGCTAAGTCTGCAGTTTTGCTTCCTCCAAAGACAACTCTTGTACAGAAATTCAGGCTCACGTGTGTTTGACAGAAACAGTTGAGCAGGCGAGCTCTGTACTTTCCGCTCCGTGCCCTCCCACCCCTCTCGAGTTTGCCCACCCCGACCCGTGTACTGTCTGTGCCGCTCACACAGGTTTTTTGTGTACAAAATCCACAGTTGGTACATCTTCGTCAGCCATGGGCTTTTGTTCCATGTTCTCAAATTAAGATACAATTTAAAATTCATGGAATTAAAGTATATTGTCAGTATAATTCAGCCCTTATAACTAGGTAGCTTTGTCTAAGAGTTTAGATGTAACAGAGCCGTGGGGTATCACTGGCCTTACACCAGGGACACACTAGGACTGTTTATTACACGGTGATTCCTGCAGCCACCCCCTCCGTAGTGGACGCAGGGAGAGCTTGTTTGTTTTCTTTTGTGTCGGTTAAAAAGTTCTGCAACTTGGCCTGGCCAATGTTTATTATTCTATGGCCAGAGCATTTTGAATTGATATATATGGTTTTAAGCAAAATTAGCAGTTTTCATTCCCTGTTGGAGTAAAAAAACAAATTTTTTTTCTTTTCCCCCTTGTTCTCATTTTTAAGTTTTTTCCCCACCGTCTTTGGTTGCTCCAGTCTCCTCTTACCCTCCTCCCAGTGCTCACCTGGGACAAACATCCCGGCCTTTGTCTCGACACAGACAGAACACCTGTAAGCAGTGCTCTGTCCTGTTGTTTGATGTGCTGATTTCTCAAATCTGCAACAATTCATCAGGTTCCTGTTTTTACCTGAAAATAAAGTTTGCTTCACCTTTTGGTTTATATTCTGTGCTGTATGCATAACTCTCAATTGTATAGATGCATCTCAACTCAAGCAGATCATCACAGCTCTGATTTGCGTCATGGCTGATTGCGCTATTCAAAGAATTAAGAATAGCAACTTGAACATAAAAAGTGGGAGGAGATTCCTTCCTTCCTTCCTAAGGTTCAAAATTAAGCCAGTTGCATAAAATTTGAGAGAATTTCAATAGTTCATCTTTCTGAAAATGAGGGATGAACTAATTTTTTTTATTGGACTTTGAGAAATCAATTTTGTTTGTTCTAAAGTCTTACTTCATTGATGTAGAAACTCCTTTGTTCCCTATTCCACCACCTTAAAGAAATTCAGTGGCTTGTTTTATTTAGATTACTTTGTCGTTTTACACTCAAATGGCCTTATACGAGCATCTTCTTAATGAACCTGGGCAGTGACCCCGGTTGGGTGAGTTAGGTGTTAGGTGGGATGGAGCAGTGAGTGGAGATTGAGGCACCTCCTGGGTCCTTTCAGAGGCTCTAGGAAGCAAAGGGCTTCACCTTGGCATCACCTTGAGGGAGCTGTGTCTCTGCAGTTCTAATATCAACACCAGGACCTGTGCAGTTTAATCAAGCAAAACTAGTTTTAATGAATGAACTGATTTGTTTTTAAACTGTTCTGAAACCTACCTTTTTACAAACTTTAAGCACAAAAGATTTTTGCCTGAACATAACATTTTTGTTCCTCGTTTTTTAAAGGATTCTGTTGTTAAAATTTCCACATATGTATAAACAATGTTTCCTATTTGGATATCTGTATTTACCATTTCAGTCATTTCATGGCCCTGGCAAATTTGGCCTCATTGATGTCAGCATCTAATGAGTACGTTAGATGGTTTTTGAATCACACTCCGGAGCTTGATTGTTTCAAAGTCAGTAGTTAGTTAACCTGTTTAAAAGCTTTCAGTCCAGCTTAAGTCCTTAACTTAGGGGTGGGGGGCGGGGGTTGGTCCTTGGTTAATTAGGGGCAGGAAGACCCTTCCTATTTTCAAGCAGTCTGCCTTGGCAGAGGCCTTAATACTGCATCATAGGGAAAAATACCCTTCTTTTGCTGTTACTCCAGTTATGCCTTAAATTTATTTGCTGAGTAACCCTGTCACCACTCACTGCTCTCTAAGGATGCTTTACACACATAGACAGTTGGATAGTGACTAAGATCTTGTTGTCCTTTATAGTTCTCTCTGAGGTGGAGTCAGTCAGATGTTAGTCATAGCTAATATCGACTGTGGGGTTGACATTCAGATAGTGACTGATTTGCTCTGCTTTGTAGATGAAAACATTTTTGACTATTTAAGAAGAAAGAGTTAGTGAAATGTATTCCCGTCCCCCCAGCCTCTCCCCAACCCCACCCCCAAAGTGGATTGTGAGTGTCCGGTAGTCTCATTAGGAACAGACGTGGAGAGAATTCTAGATGCTTTAGCCAAACCCTTCTACAGAGTCCACGGGACACTTTCTGCTCTTCCTGTGCTTCAGCTCTGCTTCCCTGTGTTGGCGGTGATGGGGAACTGCCCTTCAACTTAGCATTCTCTGAAGAAGGTAGTATCCTAAAGCCCTTGTGTCCCACGTTTGGCTGTTCTTGTGAGTTTGGTACATAACATGGAAAGGAGAGGTGCAGCTGGCTGGCCGACGTCACTTCCTGTCCTCCTCTGGGGCATCCTGTGCATAAAGGCCGTTAAGGCCGGGCGGCAGCCCCAACTTCTGCATCTAAGACGTGAGATTCAGCTCTTGTTTTTTCCACAGTGAGGATTATTGCCAGCAAACTGAGTGTGTCTTCCTGTTAGTCCAACAGGTGTTGAGACTGTGCTCCTGATTCCTGTCAGTGAGTAGACTGAGGAAATGGGAATGTTGCTGATATTCCACGGGGGGAAAAAATGTGATGAAAAAGGAGACTTGGTGGGGAAAGACCTAACTGCATTCAGAAACCAAATCCTTCTGGGAGAGGTTCTGGATGCTGAGGTTCATTTTTCATCAGCAAAGATGATCAAGCCTTTAATTCAGTTATCTTGGGCTTTGGTTGTTTTGACCCACTTTATTTTCCCTACTGTAATGAGAACATTGTTTGAAAATGTCGTATTCTGTATTTCTAACTCTGAGAAATGCTTTTGTATGGGTCGTAGGTTTGACGTTGCAGTAGTTGACATACCTGGTAAGGGATAACCTAGTGACAAATCACTGAAAATGCTTCCTTTGTTACCTCAAAAGAAAAAAAATCCAGACAAAATAAAGCATTTATATTTATAGAAAATGGAGAATTGGCTGTTTTCAAGAACTTCAAGTTAATTCTTATGCAAGAAAAAGTTCTTAACTCTAAAGACTTGTTCAGCATCAAGGAGACACTCTTTAATATTGGAAGAGGTGGTTTTATTTTTACAACAAGCCTACTCATACTACCAAACCTATAACCAATTGCTGATCTCCTGTGTAAAGCATTTTTTTTCTCTTATCTGAAACAGTGATTTATATGAACTGTTGGAATAATGGAACCTCAAAATACAGATGTGTATGTAAAATTGCATAAATGCACTGACTTCCTTCTCCCTGAATATATTTTTAATAAACAGCATTATCCTACATGGTCAGTTTTATTAAATT EMBV3_33720 GGAGAAAGGCCCTATGAATGTAGCAAATGCAAGAAACTGTACCAAGGCAGACAATGTGGC Gene GeneID:100138535|ZNF684:XM_002686539:762_cdna Constitutive 0 NULL GeneID:100138535 3 GENE ZNF684 NULL zinc finger protein 684 EMBV3_06308 TCCATTCAAAGTCCCTGCTCTGCCTGTCCTCCCACTGGTCAGCATCTTCGTGAATGTTTA Gene GeneID:100336600|LOC100336600:XM_002695361:4_cdna Constitutive 0 NULL GeneID:100336600 18 GENE LOC100336600 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 3-like EMBV3_03345 TCAACCATCCACTCCTATGACCTTGTCAGCAAACTGAACCTGCCCAACAATGGGAGAGTG Gene GeneID:100298569|LOC100298569:XM_002700306:4_cdna Constitutive 0 NULL GeneID:100298569 X GENE LOC100298569 NULL similar to melanoma antigen family B, 4 EMBV3_15818 ATTGTGCCTTGTCATTGTGACCAAGGCTATGCAGGATTGCACTAGCTCCATAATGCAGTA Gene GeneID:510817|SPOPL:XM_002685401:22_cdna Constitutive 0 NULL GeneID:510817 2 GENE SPOPL NULL speckle-type POZ protein-like EMBV3_40503 CACACAGCAGCACAGAGGGACCCAGAGACACGCCTCAGGAAAACTCCTTGGCCCAATAAA Gene GeneID:520376|ELAVL3:XM_002688873:250_cdna Constitutive 3 NULL GeneID:520376 7 GENE ELAVL3 NULL ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) EMBV3_00803 GCCACGTCACCCATCTGCTTGGAGCTAGTTAATTCCTGGTGAGAGGAAGGTTCTGTCCTT Gene GeneID:615542|MAD2L1BP:NM_001076381:356_cdna Constitutive 0 NULL GeneID:615542 23 GENE MAD2L1BP NULL MAD2L1 binding protein EMBV3_27393 ATGCATTTCAAACCCAGAGGGCTGGGCAGTTTTATAACAGGAGGTCCCAAGAGGCTTTCC Gene BVT0102_120480 + 0 NULL GK000017.2:74369087-74381173 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36869 AGCCAACAACAGGGTGGCAGATGAAGCTTTCTACAAACAACCCTTCGCTGACGTGATTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24924 GAAGGGGAGTACAGCAAATTCTTTATTACGATAAGTGGGCGGAGAAGCCCGCCTTTGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32685 CACCTTGGAATTCTTAGTTATAAGGAGGCTCCCAAATACATACAGCCATGTACCCTTAAC Gene BVT0102_265818 + 0 NULL GK000010.2:56389602-56678900 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12457 CGGACCTTAGGATCTGGAGCGCTGGCACAGACGCCTGGCCTCACCAAGAAGAGAGTGAGA Variant GeneID:506764|RNF34:NM_001014858:78_cdna 716^817 1 EMBV3_28427 GeneID:506764 17 GENE RNF34 MGC134085 ring finger protein 34 EMBV3_28916 CTTCCACATCCCCAAGGGGACGACACTCATCACCAACCTGTCGTCAGTGCTGAAGGACGA Gene GeneID:282211|CYP2D14:NM_174529:132_cdna Constitutive 0 NULL GeneID:282211 5 GENE CYP2D14 CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6 EMBV3_26189 AACAAGCCAGAAAAGGACTGGACAGAGGAGGACCGGGGCCGAGAGAAGGTGCTGATGCAA Gene GeneID:517259|MICALL1:XM_002687921:130_cdna UTR3_Alt 2 NULL GeneID:517259 5 GENE MICALL1 NULL MICAL-like 1 EMBV3_41217 AGAGAAAGGGGGCAAAGAAACAAATGGGGTGGCCTGAGTGATCTGTCTCTAAACCATTAG Gene GeneID:512999|MANSC1:NM_001075592:86_cdna Constitutive 0 NULL GeneID:512999 5 GENE MANSC1 MGC143385 MANSC domain containing 1 EMBV3_10756 CCACAAGATTTTGAAATGGAATCAACCAAAGGGCAGTGGTTTCACATCAGCGACACTCAC Gene GeneID:519992|USP16:NM_001076867:5_cdna Constitutive 1 NULL GeneID:519992 1 GENE USP16 MGC143424 ubiquitin specific peptidase 16 EMBV3_39470 CTAACTGCAGAGCTGACCGCTCACAGCTGAACAATTCATGTCGAAACCAATCCTGGACCT Gene BVT0102_191206 + 0 NULL GK000003.2:16644317-16651305 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168775 TCONS_00168776 TCONS_00168774 TCONS_00168777 TCONS_00168779 1 XLOC_103181 Coding TCONS_00168776 XLOC_103181 Coding Coding GATAD2B 3:16565790-16648011 j TSS126497 5494 1 TCONS_00168776_5 591 11 0.933313062515203 0.00251416970887788 0.001117645277249 0.00042892386413551 0.000908615961661973 0.00115147410950266 0.000157304143326659 1.15523335387057e-05 0.0013734698742469 0.00109923678002887 0.00224391775803027 1.93883830895471e-08 0.000407305542687708 0.000137573855782226 0.000936389841567922 0.000691560576221864 0.00128806736747395 0.000145386068552479 1.72082975927156e-07 0.00183969296460175 0.00260400693568974 0.000763608609181041 0.00121269241786843 0.000452601571711642 0.000122349565242395 0.00425927674974478 0.00207637168372931 0.00250993753837413 1.25081574791751e-06 1.20452919759231e-05 0.000219603616027524 XM_005203654.1 GATAD2B PREDICTED: Bos taurus GATA zinc finger domain containing 2B (GATAD2B), transcript variant X3, mRNA. 0.0 9688 99.94 0.978704040771751 NM_020699.2 GATAD2B Homo sapiens GATA zinc finger domain containing 2B (GATAD2B), mRNA. 0.0 6796 87.49 0.999817983254459 TCONS_00168776_5 sp|Q8WXI9|P66B_HUMAN P66B_HUMAN Transcriptional repressor p66-beta; 0.0 1166 98.99 0.998307952622673 1 coding 0 0 0 0 -0.106701873892435 0.45854461801023 -0.00227155124689936 0.962182928643666 GGAGTTACACCGCCACCGCCAGGATGGATAGAATGACAGAGGATGCTCTTCGCCTGAATCTGTTGAAGCGGAGCTTGGATCCAGCTGATGAGCGAGATGATGTCCTGGCTAAACGACTCAAAATGGAGGGGCATGAGGCCATGGAACGTCTGAAAATGTTGGCACTGCTCAAACGAAAGGATTTGGCAAATCTTGAGGTGCCACATGAGTTACCCACTAAACAAGATGGCAGTGGAGTCAAGGGCTATGAAGAGAAGCTTAATGGGAATCTCAGGCCTCATGGAGACAGCAGGACTGCTGGAAGGCCAGGCAAAGAAAACATCAATGATGAACCCGTAGATATGAGTGCCAGACGGAGTGAACCAGACCGAGGAAGGCTAACTCCCTCCCCAGACATCATTGTTTTGTCTGATAATGAGGCTTCCAGCCCCCGTTCCAGCTCCCGAATGGAAGAAAGACTCAAAGCAGCCAACCTAGAGATGTTTAAGGGGAAAGGCATTGAAGAACGGCAGCAACTCATCAAGCAGCTGAGAGATGAGCTGCGATTGGAAGAAGCCCGACTGGTGCTGTTAAAGAAACTGAGACAGAGTCAGCTACAGAAAGAGAACGTGGTTCAGAAGACTCCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCATGTGGGACAGCAAGGCCTGTCCAAGCTTCCCTCCCGGCCTGGGGCCCAAGGGGTTGAACAGAATTTGAGAACATTACAGGGTCACAGTGTCATCCGTTCAGCGACCAATACCACCCTCCCACACATGTTAATGTCTCAACGTGTGATTGCGCCAAACCCAGCCCAGCTACAGGGTCAGCGGGGCCCGCCTAAGCCTGGCCTTGTACGCACCACAACACCCAATATGAATCCCACCATCAATTACCAACCGTCAAGTTCTTCTGTTCCCTGTCAGCGCACAACATCCTCTGCCATCTATATGAATCTTGCCTCCCATATCCAGCCAGGGACCGTGAACAGGGTGTCCTCACCACTCCCCAGCCCCAGCGCCATGACAGATGCTGCCAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGACACTCTTGGAGATTCCACCCCCTAAACCACCTGCTCCCTTGCTTCACTTCCTGCCTAGTGCAGCCAATAGCGAGTTCATCTACATGGTAGGCTTGGAGGAAGTCGTACAGAGTGTCATCGACAGCCAAGGGAAAAGCTGTGCCTCTCTTCTGCGGGTCGAACCCTTTGTTTGTGCCCAGTGCCGCACAGACTTCACCCCTCACTGGAAGCAGGAGAAGAATGGAAAGATTCTGTGTGAGCAGTGTATGACCTCCAACCAGAAGAAGGCTCTAAAGGCAGAACACACCAACCGGCTGAAAAATGCTTTTGTTAAAGCCCTACAGCAGGAACAGGAAATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCCAACTACGGCTCCAGCTGTGTCCAGTGTCAGTAAACAAGAGACCATAATGAGACATCATACGCTCCGGCAGGCTCCGCAGCCCCAAAGCAGCCTCCAGCGTGGTATTCCCACATCTGCCCGTTCCATGCTTTCCAACTTTGCACAGGCACCCCAGCTGTCTGTGCCGGGTGGCCTCCTTGGTATGCCAGGTGTCAACATTGCATACTTGAACACTGGTATTGGAGGACACAAAGCCCCCAGTCTGGCAGACCGACAGCGGGAATACCTTTTAGACATGATCCCTCCCCGGTCTATATCGCAGTCCATCAGTGGACAGAAATAACGCCTGTTCCACTTATACTGCCCCAACCTTGAACCCTTTACCCTCTCCTCCCCCATGTCCCCAACTTCCGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAACAAAACAGAAAAACAGAAGACACAAAGTAGGAATCAGCAAGAAAACACACGCCCTGCCCCGCCACCTCCCCTTTAGTTTACACTGCTGCGATCTGTTCTGCCACTTTCTCTCTTCAGTTTTAATAGCGAGGTGGATCTCTGCCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAAATCTAAGCCCTTGGATGTGTGTTTCTAAAGTTTGTTTTTATGCTTTAATTATTATTATCATTTTTAATGATGTTGTGTGTCCTCCCTTTGTTCAGTGGACGGTTAAACCTTTTTATTTTCACCCAGTATTTTTTTTTTCTTTTCTTTTGTCTTTTTTCTTTTTTGTAAACACAAATGACATTCAGTTAAGTGATAGGAGCATTGCAGTAGGGTCCCCAGCTGCCAAGTAGGACATGACTGGGAGTGTTAGGGGCAAAAGTTTTTAATGCACTTAACCCAGGGTTGGGGGGAGGTGGTGGCATCAAACAGGGAGGAATAGCACACCAGCTATGGGGTGTCTCTGAGCTGGACAGTTCAGAAGGCAGTGTTGACTATTGAAGTTGGGCTCTAAGAATGAGGGGAAAGAGCCTGGAAGGAGAAGCTTTAAAAGTTAACCACTCTAAAAGTGACCCATAAAGAAGAGAGAGAAAGGGGCATGACAGTGAACATCATGTTGAGCCAAGGAGGACTGAGACCACGTCCTAGCCTTCTGGATGCTGGGCGAATGAGGTTAGTCTCCTGACCCCAGTGGAAACGCAGAAGACTATTCCAGGCCAACTAGCCCCAGATTATTTCATCTTATTTTTTTGTAAAGTTCTCCCCCATCCCCATCTCCTTTCTTTTCTTTTTTAAAAATCCTAATCTGCCCTCAGTAACCACAGCCCCATCTGTAATATAGAGTGGCTGTTCCCAGCTTGACTTTGCTGGGTGTCCTGGAAGTTGGATGGGCATGAGTGAGTGAAATGTCAAAGGGAGGAAATAGAGGGAGAAAGAGAGAGAGGATTCCCTCCCAATAGTTGCGACTTTCCCATTTGTCTCTTTACCTTCTGAGCGCCAGGAGATGAGGGTGAGGGCACCTAATCAGGTGGGAGCCCTACCCTGGCCCTGCTGCGCTAACTGCAGAGCTGACCGCTCACAGCTGAACAATTCATGTCAAAACCAATCCTGGACCTGTGCTATAAAAGTAGTTGTTGTCTTTTTTCTCCCCAGAATTCTATAAATTTTGCTTTCTTGTTTGTTTTTATTCTTTTCTTAAGTGCTACTAATGTAGAGAATGAATTGAATTGTGCAATGTTGCTGTTCTGGGGATTGGGGAGATTAGCATCCCATTTGCCCACACCATGGGGGACAGGGGAAGGGACCAGGCTGTTTTTGAGGTAAGGGAAGCCCATTAAAGGTAGGGGTTTCTGCTCACTTCATAGTGCATGTCCACCTGCCTCTCCAGCTCTAATAAAAGCTGCCAGAGTTTGAGGAAGGGATACTCTCAGCAGAGAGGTGTGAAGAGGAGTGTAACATTTTGCCCTTGAAAGCCACCTGGAGAGGTTCCCCCATTTTTATTTTTTAAAATTAAATAATTTTTTAAAGTAAGAAGGCACTTTTAAAATTAACACACACACAAACTGCACATCCTCCCCATAAAGTTTGGGGAGGGGATAGGAGGAGCTGGAATCAGGCTCAGTTCCCCCCACACTGGCTTCTACTCCCCATACTCCAGAGCCACTGTGGGTGATTATACTGGCCCTACGGGCCTTCCTGGCTTTTTTTCTTTCCTCCCTTTCCCCCAATTCATTGAGCACTTAATAAAGGAGCAGAGATGCAGCCTGTGTCTGGGCTCCCCAGTGGTGAAATGATCTGGAAGCTAGACGCTAGTAACAGGTAGTGATGGGGTTGTTTCGAGTATTTTTCTGGGGAATGTGGAACCCCTGACTAAGTGGTGGGAGAGGGAGGGGGGTTAGTGGAACTGGGTCTGGGATTATTTTAAAATTATATATATATATATAAAGATATATTCTTACATCTTTCCTTTGCCCTCTGTGCTTTGAAAGCACTGGATAAATCGTTTGGTTTTGCTTTTCTCTCTTCCACAAAATTGGAAGCTTTTTAAAAAATATTTTCCCTGCAAGTCATCTTGCCTTGTGGCATGTCTGTCTAGCCTCCCTCCCCCCACCCCATGATGAAGTGCCATTTCTGTTATGTCTCCCCTCCCCCAGCTCAGAGGTGCTCAGAGGTACGAGGTGCCCGAGTTTGTCAGTTGAGATTAAAAGTAAGGAACAGAGAATGTGCAATACCGTCTGGCTGGGGGCTGTCCCTGCCCTGAGCTGAATCCCTTCCCTGGGAGCCAGGCCACCTTTGAATGGGGTTTGGAAGTAAGATGTGTAGAGATGGGGATGATGGGGAAGGAAAGCCTGTAGTCGCCTGCCTGCCAAGGTGCTGAGGCGATAGGGGAGAGGGTGGAGTCTTCCCTGTTTTTATCCCCTCAGGGTCAGTTACATAGAGGCTGCTTGTTGACTGGTATAGCTCCGTGACCCTTTGCTCAATCGCTGAGGTTTGATTTCTTACCCTCTCTTATCCCCATTTTCATACCCTTCCCAGGGATTAGTGACGGGGGTGAGGCTCCTCTAATCATGGTGAAGTATTAGCCTTCCACCTCCTCCCTTCTCCTCCCTCTCCCCCATCCTGTCTTCCTCATTTCTCTCCTTTTTCATCACTGATTGCCTTGTGTCCCTCCAAGTCTGTTGTTGCTGTCCATCCCCAGGCCTTGGGCCCCATAGACACTAAACCTCATGCCCTAAAGATAGGAAGAAAGACCCTCTGTACAGAGTTATCCTTCACCCCTGGAGCACTGAAGCTCAGGGTGATACTAGAGTGAGGATCCCACCAGTTTTGCCTGGCTTCCTCCATCACCAGAGGCTTAAAAAGTAGTAGTTTATGGACAGTGGCTTACTCTCTCTAAGCCTGATACAGGTGAATGAGCGGTAAGGCTTTGGTAAAACTGAGGGACAGAGGTCCTTATTTGTCTTTTTTTTTTTTCTTTTTCTTTTTGTCATTTGACCACAGCATCTGGACTTCTTTCATCCCTGGAATAAGTATTTTTCCACATTTTTTGGATGTATGTATGGTAGACAATTTTTTTTTAAGACACAGAGATAAATGTTTTCCTGCTTTGGTTACCTTTCCTTTCCCCTTTAAAAGGAATTAGCTATAGAACTGCTTTGTAAAGATGCTTCTTGATATTTTACTTTTGTTCCTTTTCCCTAACCTCTCCCTTTTCTCCCCACTTCTCCAGAAGGCATAACCTTCTCTCCACACCCCCTACCCCCACCCCAGTCCTAGGCTCCTTTCCCCTCCAACAAGACCTTCATTAGCTTATGATATTTGCTGCCGAGATGTTATAACAAGGACTCATTCGTGTATATAAGCTATTTCTTGATCCATTTAAAAGGAATTGTACATTGTGTAGAAAAAAAAAAAACTGAAAAAGAGAAAAAAAAGCCCTAGCCATGGATATTGTGAAACTGTGTTATGTCATTTTGTAATGTGCCCGTTTGTGTATGATCCGTGCAAAAGGGTTTCTGGGGAAGGGGAGG EMBV3_27625 TTCAGCGTGCTCCTGGGTGACCTCAACTTCGACAACTGCTCGCTAGACCACCAAAAGGAA Gene GeneID:100141215|LOC100141215:XM_002692586:310_cdna Constitutive 0 NULL GeneID:100141215 14 GENE LOC100141215 NULL similar to mCG22096 EMBV3_09768 TTACATGATCACGGTGAGGACCAAGAGCAGCCAGAACGTGAAAGACGTGGTGCGGTTCTT Gene GeneID:100299600|LOC100299600:XM_002691714:90_cdna Constitutive 1 NULL GeneID:100299600 11 GENE LOC100299600 NULL similar to ATP-binding cassette, sub-family A (ABC1), member 2 EMBV3_18801 GCTCTGGGCTACAGATCACTATCAGCCTTTACGGATATTTGCTGGCCATCTTGCTGATGT Gene GeneID:516001|TAF5:XM_002698461:482_cdna Constitutive 0 NULL GeneID:516001 26 GENE TAF5 NULL TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa EMBV3_20812 CACAGTTTTGGTGGTGCTGTGGGTGGAATGGTGTGTGGCTGAACAGAGATCGGAGGATCA Variant GeneID:531992|SERHL2:XM_002687970:95_cdna 454^643 1 EMBV3_25193 GeneID:531992 5 GENE SERHL2 NULL serine hydrolase-like 2 EMBV3_35383 TAGGTAATGGTTGTTACATCCCACTAAAAACCCCAAGATACTAATGGTTAACATGTGGCG Gene GeneID:505068|TRAM1L1:XM_002688067:16_cdna Constitutive 0 NULL GeneID:505068 6 GENE TRAM1L1 NULL translocation associated membrane protein 1-like 1 EMBV3_26783 TGTTGAGTAGGGGCCCTGCCAGGAACTGACCAACTCAGCGATGGAGCCATAGTGTGTATA Gene GeneID:613810|CDK16:NM_001101226:17_cdna Constitutive 0 NULL GeneID:613810 X GENE CDK16 PCTK1 cyclin-dependent kinase 16 EMBV3_22805 GGTTGGAAGTACAGGGCAGCATATCAGAAAGTTTAATGGGTTCTATCAAGACACTGATCT Gene BVV0102_356690 + 0 NULL GK000011.2:33444722-34723986 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20609 AGACAGCAAACGGCTTCATCTCAAATGCCACATCTTACCCACTGGGAGTGGCTGCTTGGA Gene BVT0102_056407 + 0 NULL GK000022.2:58494801-58693671 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36436 TGGGCCAGATCCGGTACTCTGCGACTTTCTACCTCAACAGCAATGGATTCATTTGTGACT Variant GeneID:505687|PLS3:NM_001045923:126_cdna 64^229 2 EMBV3_10047 GeneID:505687 X GENE PLS3 MGC128570 plastin 3 (T isoform) EMBV3_14008 GCATAGTTCCCCTTTAGAACCATGAGTTTAGCATTTGCTTGTTGAAAGGAGCCTGTGCCC Gene GeneID:504440|EXOC1:NM_001102484:89_cdna UTR3_Alt 2 NULL GeneID:504440 6 GENE EXOC1 MGC165876 exocyst complex component 1 EMBV3_25230 GCGGCAAGACTGTTTGGCCGCCTCTACAAGGAGATCGAAGTTGGCGGTGGCCGGAAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10519 CCTGGCAATCCAATGGTTAAGACTCCATGCTCTCATTGCAGGGTATATAGGTTTGATCCC Gene BVV0102_080864 + 0 NULL GK000004.2:89235810-89805487 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03446 TGCCGCCGCAGGCCCGAGCCCCACCTCCAAAGGAGCCACCTGGCCCAGGGCCAGACATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30705 ACGTACCAGGACATCCGTGCTGTGGGCAACTTTAAGGAGCAGACGGTGATTGCGGTCAAG Gene GeneID:617024|E2F2:XM_002685777:604_cdna Constitutive 0 NULL GeneID:617024 2 GENE E2F2 NULL E2F transcription factor 2 EMBV3_02572 CTAGGCTCGTGCTTTAGTGCTTTGACTACTTCTGTCCTGCTGGAAACCTCCTACTTTGAC Gene BVV0102_258152 + 0 NULL GK000019.2:56905609-56923969 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101029 1 XLOC_061271 NonCoding TCONS_00101029 XLOC_061271 NonCoding NonCoding - 19:56921056-56921771 - TSS75405 715 1 TCONS_00101029_1 57 1 0 0.000190289389353306 0 2.58852845498817e-05 0.00101043576405594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000117235342410468 0 1.97076063934165e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.411780547578226 0.0582744536901815 NA NA GGTGAGGGAGTGGAGACAGCTGGCATGGACATTTTTTTCAAGATGTTGGGCCAAGAACAGACAGAGATACAGTGTTAACTTTAGATGGAACTAGAAATGAAAATCTTTTTCTACGCTAACCAGGGAGTGGAGGAAAATACAGGACAAAAGAAATAATCAATAAACCCTATGGAGAGAAGCAGGGCACAGATGTCAGGGTTGTTCTTAAGATGCGAAGGACCTACTTCCATTTGTGAAACTGACGGACAAAATGATCGACTGATTTGGAAGATAGATATCTGGTACTTTTCTTTGATAGATGTTGTTTATCCTCTGGGAAGTTGGGAGCCAGGCCATGAGTAAGGAGTTTGTAGGCTGAACCTTTTTTCCTCAGCTAGTCAAAGTAGGAGGTTTCCAGCAGGACAGAAGTAGTCAAAGCACTAAAGCACGAGCCTAGTGGGAAGTGGGCTGAGGCTGAAGCTTTAAAATTCGAGGGATGAGAGGCTGACTGAGAGGAAGTGTGATGTTCCTCTCATCCAGAGGAAAGCTGCATTTGGGCCACAAAATGAGAGGTTCTTTTCCCCGAACCTCGTGCTGGGGCTTTGATTTTGGGTCCCTCTGCCTCGTCTAGTCAATTTGCCTTCCCCAGCTTGTCTCTCACGTCTAGGCCTCGAGCCTCCTTGTCCCCACCGAGGACCAGCTGGAAGCCATTTTGATTAAGCTCCACCACAGAAGG TCONS_00094745 . 5' 2197 TCONS_00094745 . 5' 2197 EMBV3_00852 GGATTGCAGCTGTAACTGAAATCCCTTTAGGTCATCTACTACATGGGCGAAACTTGGATT Variant GeneID:510620|ASAH1:NM_001075459:34_cdna 466^540 2 EMBV3_36639 GeneID:510620 27 GENE ASAH1 MGC140781 N-acylsphingosine amidohydrolase (acid ceramidase) 1 EMBV3_33166 GTAGAACAAAAACCCAACGCACCTGTTAGAGTTGTCACTATCTATTGTCATGGGAATCAA Gene GeneID:534799|TOP1:XM_002692463:512_cdna Constitutive 2 NULL GeneID:534799 13 GENE TOP1 NULL topoisomerase (DNA) I EMBV3_02395 CTGAAGTATTGAAAACTTGAGAATTTTGAGACATTCTGAGGTCTTGAGATCATGAATTGC Gene GeneID:533006|RECQL:NM_001077991:40_cdna Constitutive 0 NULL GeneID:533006 5 GENE RECQL MGC139684 RecQ protein-like (DNA helicase Q1-like) EMBV3_21771 GGTGACGGCTTCTAACAGGTTCAAGACGCTGATGACCAATAAATCAGAGCAAGATGGCGA Gene GeneID:528597|ABTB2:XR_083866:2_cdna Constitutive 0 NULL GeneID:528597 15 PSEUDO ABTB2 NULL ankyrin repeat and BTB (POZ) domain containing 2 EMBV3_34861 ACAGGCACCCAGCTATTCTGACAGACAGGTGGACAGACGGACAGACAGCCAGCTGTGGGT Gene GeneID:526847|LOC526847:XR_084602:190_cdna Constitutive 0 NULL GeneID:526847 17 PSEUDO LOC526847 NULL similar to zinc finger, DHHC-type containing 8 EMBV3_41780 GAGATCCTGAACCGATTAGAAAAGACCAAAATGGAGCGGTTCCCAGACCTAGAGGCAGAG Gene GeneID:507275|CCDC25:NM_001035044:43_cdna Constitutive 0 NULL GeneID:507275 8 GENE CCDC25 MGC127756 coiled-coil domain containing 25 EMBV3_25611 CAGTTGAGGAACGCAGCGGATGTGGATGACAGAAGAAACAGAATGTTAACCAGGAAGGCC Gene GeneID:505010|CLMN:XM_002696763:430_cdna Constitutive 0 NULL GeneID:505010 21 GENE CLMN NULL calmin (calponin-like, transmembrane) EMBV3_43332 ATCAGCCTTCCTCAGGGCCAAGGAAGAGCAGCAGGACGACACTGTGTACATGGGCAAAGT Gene GeneID:511045|DCTN1:NM_001098934:20_cdna Constitutive 0 NULL GeneID:511045 11 GENE DCTN1 MGC148413 dynactin 1 (p150, glued homolog, Drosophila) EMBV3_37209 CTGGCTTGAAGACCATTGGTGGGGTCTTAGTTGATGGTTTGTTGGTTCACACCACCAGTC Gene GeneID:511011|C11HXORF26:XM_002699986:75_cdna Constitutive 1 NULL GeneID:511011 X GENE C11HXORF26 NULL chromosome X open reading frame 26 ortholog EMBV3_00914 CACTGCGGAGGATGGCTTTTTCTTCATTCCAGCCCAGGCAGACAGGAGGATGTTAGATGA Gene GeneID:100299402|LOC100299402:XM_002691684:103_cdna Constitutive 0 NULL GeneID:100299402 11 GENE LOC100299402 NULL similar to transmembrane protein 203 EMBV3_33965 GGGAGTTCCCGTCCATGCTGGCCCTCTCTGGTATCTGCGGGATGGTGGCCGTCTCCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36411 GGAGAGATGGGGAGGCGTGGCGCTGGGGCTGAGTTGGATGGCAGCGTAATTCCGAACGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09146 CACTTTTCCCCTTCCCAAATTTCCCACGTCCCAGTATGGTCAATCACTCTTCTCTACCTC Gene BVT0101_061049 - 1 EMBV3_30767 GK000003.2:37039666-37266784 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00657 AGGCAAACACGTGAAGATGAGCAGACCCGTCAGCGACGAGACAGGCAAACCCATGAAGAT Gene GeneID:100140126|RPTN:XM_002686071:324_cdna Constitutive 0 NULL GeneID:100140126 3 GENE RPTN NULL repetin EMBV3_20781 TCTGTTAGGAGAACCCGTTAGGACATGGCTGCTTTACAGTCACGGAGTTGTGGGTCTGGA Gene BVV0102_246299 + 1 EMBV3_02644 GK000003.2:108916445-108917608 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174650 TCONS_00171248 TCONS_00171251 TCONS_00174651 TCONS_00171250 TCONS_00174649 2 XLOC_104657 XLOC_103778 Coding TCONS_00171248 XLOC_103778 Coding Coding GNL2 3:108892083-108917587 j TSS127775 1864 2 TCONS_00171248_1 134 5 0.92710661490805 0.00086656242021163 0.000966512847573042 0.000567104692119324 0.000709522741449446 0.000945396141735202 0.000153830784204901 0.000222509358758532 0.000469135488029255 0.000552670495998649 1.2956100076904e-05 2.15268194832286e-05 7.1672461073853e-05 0.000142429552152446 5.38875825931763e-05 0.000242226343774975 0.000608321692377364 0.00134679579823531 0.00168660952610996 0.000409895469462627 0.000355791241703255 0.000433392067498382 0.000143183856058776 5.16284520975938e-05 0.00027405457109293 0.00140395105114482 0.000540282643178673 0.00111566710584033 2.16564801901817e-05 4.97693653147662e-05 2.34109151107738e-05 NM_001045967.2 GNL2 Bos taurus guanine nucleotide binding protein-like 2 (nucleolar) (GNL2), mRNA. 0.0 771 100.00 0.228540772532189 NM_013285.2 GNL2 Homo sapiens guanine nucleotide binding protein-like 2 (nucleolar) (GNL2), mRNA. 3e-163 580 86.14 0.266094420600858 TCONS_00171248_1 sp|Q13823|NOG2_HUMAN NOG2_HUMAN Nucleolar GTP-binding protein 2; 4e-74 238 95.80 0.880597014925373 1 coding 0 0 0 0 -0.297005155044072 0.37711607994616 0.0315699515649792 0.681897580105272 GAGTGCGGCGGCGCGCTCCTCGCGATCGCAGGAAGTCGCGCGGGGAAAGAAGGGTGCGAGCGGAAGTGACGTCGTCCCGCACACGCGGTCCAGCGTGGTTCGCGCGAGTTTCCACGGTCCGGTTCGGGAAGTTACGAGCTTTTGTACCCCACGCAGGCCGGGCCCAGCGGTCTGGTACCAGTCCTGTCGGCAAGATGGTGAAGCCCAAGTACAAAGGACGGAGCACTATCAACCCCTCTAATGCCAGCACAAATCCCGATCGAGTGCAGGGAGCAGGAGGTCACAACATGAGGGACCGGGCCACAATTCGACGCCTGAATATGTACAGACAGAAGGAGCGCAGGAACAGCCGTGGTAAAGTGATTAAGCCTCTGCAGTATCAGTCAACAGTGGCTTCTGGCACAGTGGCAAGAGTGGAGCCAAACATTAAGTGGTTTGGAAATACACGTGTGATTAAGCAGTCATCATTACAAAAATTTCAAGAGGAAATGGACACAGTCTTGAAGGATCCATACAAAGTTGTCATGAAGCAAAGCAAGTTACCCGGCAGCAGCGATCTAGAAAAGTCGGCATACGCTACTATGAAACACACAATGTGAAGAATAGGAACAGGAACAAAAAGAAGACCACCGACTCAGAAGGGCAGAAACACAGACACAAGAAAGCCAAACATAAGCAGTAATGTGTTAAAAGTTGTCTATTAAATTATACAAAAATATGCAACTAGAAACTGTTCATTTTCTTCATGACCAGTTGGCATTTCAAAGGCCATGATGCATCTGTTCTGAGATTGGACAGTTGAAACCACCCACCAGTACTAGTGAAAGTAAAGAGAACTCCTCACCCCCAAGGATTTCAGTGATGGAGTCCCCTCGAACTCCTGACAAATGAGTTAGTCCTCTGAGTTCCTAAGAGTATAACCCTGGCATGAAAGTGTCTGACAGAAACAGGGCCGAGGTCTAGAAAATACGGAGTGTGGTATTTATTTTGTACTAGCAATGAGCAGTTTAGTTTGGAATAGAACTGTTTTTGTTTTAATATTATGGATGTTGTGTCAGAGCCTAGACTTTAAAATACGAAGCAAAAGCCTCAGCAGTTCGCAGTGCTCCTCACTGGGTCTGTTAGGAGAACCCGTTTCCTCACTGGGTCTGTTAGGAGAACCCGTTAGGACATGGCTGCTTTACAGTCACGGAGTTGTGGGTCTGGAACATCTCTGTGACCACAGCTCTTCCCATGAAGATGACGGAGCACAGACAGGCTGTTTCAGTGGAATCTGGGGGCTGGTGCCTCAGGACACCTGGATGAGGGCAAAAGCTGTGACTTCAGATTTGAGATGAAAGTATAGGGGGCTTGTTGGACTCAGTGGAACACAGCTCTTCTTGTTGGCCTGCCGTTCTCTGAGGGAGCCTGGAAGCCCTCGCCAGACAGGCGTCAGGTCCGAGCACCTCTTCATGGGAGCACTGAGCACCTAGCACCTTCCAGCGAGGGGAGATGTTAGTGCCTTCTTAGTTATGCTACTTGGGAAGTTTGAATGATGGAACTTAGTCATTTTGCTAGTCTACCCTGAATCAGATTTATGTTGCTAATTTAGTCTTCGGGGTCTGTAAAACGAGAAGAGTTCTGAGCCTCCAAACTTTGAGTCTAGCTTATGAGGAAGAGTAAAATGCAGTTGTCTCCTCGCCATGGCCTGGTCACTAATAATAATGAGAACTGCATGTGAGGTGTGGGCTAGTCAGAGTTGTAGGGCTGAAGTTTGATTTTCTGCAGAGTAAGGTGAAAAGATCCAATCAGTGGGGGAGGAGCAAGGTCCACGCAGCTCACAGTGGACACCTCGACCTGTATTTCTTTCCAGCAGACACTCACT EMBV3_43025 GCCTCCGGCGGCGCTCAGTGGAACCATCAGAAGCTGAGCTCCTTAGGAAAATTCGCATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30344 GAATTCACACCAGTATTCTCAGCGTGGTTGTTCTGTGGCATTCTTGCTCTTTGACCAAGT Gene GeneID:520311|SH3GL3:XM_002696595:60_cdna Constitutive 2 NULL GeneID:520311 21 GENE SH3GL3 NULL SH3-domain GRB2-like 3 EMBV3_23401 GCTGAGAGTCTCCTTCCTTAACTCAGGCAATGGCTGGCCAAGAACTGAATGGACAACTGA Gene GeneID:505657|INTS4:NM_001110065:13_cdna UTR3_Alt 2 NULL GeneID:505657 29 GENE INTS4 MGC128653 integrator complex subunit 4 EMBV3_35930 GCTGGGCATAACTCCCTACAGCCTACTTTGGAACAACTGCGAGCATTTCGTCACCTACTG Gene GeneID:281285|LRAT:NM_177503:17_cdna UTR3_Alt 2 NULL GeneID:281285 17 GENE LRAT MGC134242 lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) EMBV3_07703 GGAGAGGGCAAGAAGTGCCGGAAGGTGTACGGCATGGAGAATCGGGACATGTGGTGCACA Gene GeneID:513243|ZNF704:XM_002692712:134_cdna Constitutive 0 NULL GeneID:513243 14 GENE ZNF704 NULL zinc finger protein 704 EMBV3_43153 CCAGGAGGGTGGCTTTCCTGGGATGTGTTAACTTTTCAGTTCCACAATCACTGTCAACTT Gene GeneID:614911|PLA2G5:XM_002685727:446_cdna Constitutive 0 NULL GeneID:614911 2 GENE PLA2G5 NULL phospholipase A2, group V EMBV3_04172 GGGCCTGCGGGAAGCTGTCCTGTTAATAAGCCACTAGGGGGCAGCACAGTGCCAGTTTCT Gene GeneID:338081|ATP5D:NM_176670:20_cdna Constitutive 0 NULL GeneID:338081 7 GENE ATP5D NULL ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit EMBV3_39246 CTGAGGAAGTAGAATGCCCAGTGCCACAATCATGGGGTAGGGATACAAAAGGAACCAGAG Gene GeneID:538489|ZNF484:XM_002689846:27_cdna Constitutive 0 NULL GeneID:538489 8 GENE ZNF484 NULL zinc finger protein 484 EMBV3_28198 GGCCTGTGTCTGCCTCCTTCCTGAGTAGGCCAGGTGGCCCGGCGGGAATTCCAGACCAGT Variant GeneID:338053|ATP5G1:NM_176649:38_cdna 138^181 2 EMBV3_27472 GeneID:338053 19 GENE ATP5G1 NULL ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) EMBV3_37074 CTTGAGGAGTCCACACACTTTGGGGCTAAACCGGTACCACCCGTACGGCAAGAGCCACTT Gene GeneID:782419|ZNF703:XM_002698732:193_cdna Constitutive 0 NULL GeneID:782419 27 GENE ZNF703 NULL zinc finger protein 703 EMBV3_01426 TGCTGCCTCCAGCTCCAGGAGGAGACAACCAATCTCTCACAGGATGCATTTGCAACTTCA Gene BVT0101_001615 + 0 NULL GK000007.2:39208830-39210774 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216546 TCONS_00216553 TCONS_00216550 TCONS_00216552 TCONS_00216547 TCONS_00216551 TCONS_00216548 TCONS_00216545 TCONS_00216549 TCONS_00216555 TCONS_00216554 1 XLOC_131257 Coding TCONS_00216547 XLOC_131257 Coding Coding CLTB 7:39209044-39225688 j TSS161477 2594 1 TCONS_00216547_2 162 0.253276792598304 6 0.844499188848164 3.21576802671859e-05 1.00961861330779e-14 3.4472720200671e-05 1.0446820402994e-05 0.00019674095603592 2.43462025969417e-09 9.66887970490733e-10 6.9409809911707e-05 0.000236461911127123 4.27633445779286e-05 7.7645525355739e-19 4.16199230227544e-05 0.000161805666636934 1.95783831053219e-44 5.24539239604175e-13 0.00261293970724409 0.0032218344571667 0.00511652835124575 1.99677664006792e-23 1.29985365154701e-19 6.89095599671903e-10 0.00182833935598184 0.000859978988600578 0.000948754634701277 6.43888763921556e-09 1.61452101880381e-09 4.77365646252593e-10 0.000244160410360466 9.46793182239892e-10 0.000109711456436252 XM_005209121.1 CLTB PREDICTED: Bos taurus clathrin, light chain B (CLTB), transcript 0.0 1490 100.00 0.318041634541249 NM_007097.3 CLTB Homo sapiens clathrin, light chain B (CLTB), transcript variant 2, 0.0 1088 89.73 0.317270624518119 TCONS_00216547_2 sp|P04975|CLCB_BOVIN CLCB_BOVIN Clathrin light chain B; 3e-116 333 100.00 0.993827160493827 1 coding 0 0 0 0 0.064536260926804 0.644067591678497 -0.0241996478908612 0.656692339867178 CCTCGCAGACCCGCCCTGAGCCTCCAGCTCCTCTGCTGGCTCACTGGGCATAGGCTCCATAGGAAATCAGGCCATTCCTAACTGCAGCTGAGGGGAAATTAATTTCAGCTTCTGAGGACATGGGGGCCACGGTCAATGGAGATGTGTTTCAGGAGGCCAACGGTCCCGCGGATGGCTATGCTGCAATCGCCCAGGCGGACAGGCTGACGCAGGAACCCGAGAGCATCCGCAAATGGAGAGAGGAGCAGCGGAAACGGCTGCAGGAGCTGGATGCTGCCTCCAAAGTGATGGAGCAGGAGTGGCGGGAGAAGGCCAAGAAGGACCTGGAGGAATGGAACCAGCGCCAGAGTGAACAAGTTGAGAAGAACAAGATCAACAACCGGATCGCTGACAAAGCATTCTACCAGCAGCCAGATGCTGATATCATCGGCTACGTGGCATCTGAGGAGGCTTTTGTGAAGGAATCCAAGGAGGAGACCCCGGGCACAGAGTGGGAGAAGGTGGCCCAGCTGTGTGACTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGACGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACACCGCTGTCCCGCTAGGAGTCTGCCAGCAGCATGGCCGCCAAGCAGGGGCCGGGCCGGGCAGAGGAGGAGCAGCTGCTTTGGCCAGGGGGCGGAAATGCCTCCCACAGCTGCTACACAGCCTATTCCGTTCCTCCCCATCTCCCGGGGCCGGGAAGGGGAACCCTCACCCCCTCACCCGTCATTCCCTCACGGCCCAAGGGCCCAGCCCCTCACACCTCCTCTCAGTCCACAAAATTGTGACTGTCCTTCCTGATGTATTTTTTTTTCTTGGCTTAAAGGGTGTGTTGTTAACTCTTTTTACATTTATTTATTATCATTCTCATTTCTCTGGAAGCCACAACTGGTGTCAGGGCTTGGTTTGTGCTTAGAACCTCCCCAGCTTCATGGACTAGAGAGAAGGTAAGGCTGTTTCCCTGGTAACCCAGGAGCTCCCAGCTGGAAGTGAAGGAACCCATCTATGTCTGCTGCCTCCAGCTCCAGGAGGAGACAACCAATCTCTCACAGGATGCATTTGCAACTTCAGTCCTTTCTGATTGAACAAGCCTGTGAGATAAGGATTTGGGAGAAACAGTCAGTGACTATACCTTCTCTCCCTTCAACAGAGGTTGTGCACAGGTTACATTCAAGCCACTGTGATCTGAAGTGTTTAAAAAGACTTAATTGCCAACCTTATTAGTTTCCTAGAACTGCCATAACCACATTGTCTGAGTTAAAACAACAGAATTTATCATCTCACTGTTCTGGAGGTCATTAAGTCTGAAACCATGGTGTCACCATCCCTCTAAAGGCCCTAGAGTAGAAGCTGTGTTCCTTGACTTGTACATACATTATTACAATCCTGAGTTTATCATCACATCCCTTGTTCTCTATACATGTCTGCTTTTGTGTCCAGACTTCCCCTTTGTATAAGTACACCAGTCATACTGGATTAGGGTCCACCCTACTGACCTCATTTTAAATTGATTACCTCTGAAAAGACCCTATTATCAAATAAGATCACTTTCTGAAGTGCTGGGGTTAGGACTTTGAACTAACCTTTTTTTTTTGGTGGGGGTTGGAGGGGGAGGAACATAGTGGCCATCCTCTCTAGAAGTGCCATAGCCCTCACCACTTCATGTCTGTTCCGTGTGGAGACCAAGGGTCACCACAGTGTACTGCTTTACACTTAGAATCTCTCTTACAGCTGAAAGACCTTGATGGGGGGCAAGAAGCTTTGCTGGTCTTAGTCATACAGATGGTGTTGAAACTGAGGGAGCCATGGATGGAAGGAAACAGAATCTGAGTCAACACTTTAGGGATGATTGCAGATCAGGAACACCTGTTTGAGATTTTAGATGAATGAGAAACTCATGAGGTGCCTCTCTTCTTGAGTTTGCTCAGATCTCCAGCCTCCTTTTCTCCTTAACCATAAAACACTAGGTACTGCCACAAATCATTGGCAAGCTTTGGGATTACCCTGTGAGCTGTTTCTGTTACATCAAGCTGTGGCTCTAAGCCTCAGTTTCCTGTTCTGTAAGATGCATCAAGAACCAAGCTGAGATGGTCTAGATCAGCCTTAAGTGTTCTCAGGAGATGGTACTGGAGTCAGGATCAGAAGTGGAGGGCAGAAGCGTGGCAGGCCTCATAGGAAGGAAGGTTTTCTACTTAAAGTTTGAAAATTGTTGGAAAGATCAGTTCCCACCCCCGAGCCTGGCCCCACATATAACATTGCTGTAGAGACTGTCTTGTTGTTCAGTCGCTAAGTCATGTCAGACTCTCTGCTATCCCATGAATATAGCAAGCCAGGTTTCCCTGTCTTTCATTATCTCCTGGAGTTTGCACAAATTTGATTATTGAATCGGTGATGCTATTCAACCATCTCATCCTCTATCACCCTCTTCTCCTCCTGCCTTCAATCTTTCCCAGCATCAGGGTCTTTACCAATGAGTTGGCTCTTTGCATCAGGTGGCCAAAGTATTGGAGCTTCAGCATCAGTCCTTCCAGTGAATATTCAGGGTTGAT EMBV3_17474 AGTGTGACCCAGGTCCAGTATCCCCAGAGATGGAACCCATTTTCACTGCCTTCCTTCATT Gene BVT0102_074946 + 1 EMBV3_40257 GK000016.2:43449542-43463115 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09691 AGGTCCAAAGCCTTCAGCACATGCAGCTCCCACATCTCAGCTGTTGCTGTTTTCTATGGA Gene GeneID:781828|LOC781828:XM_002699150:12_cdna Constitutive 0 NULL GeneID:781828 29 GENE LOC781828 NULL similar to Olfactory receptor 8G2 (Olfactory receptor OR11-297) (Olfactory receptor TPCR120) EMBV3_06425 GCCATGCCTGCTTCGGAGACATTAAGGGAGAGGCCCCGGTGCTCTCGTCAATCTGGTGTG Variant GeneID:505523|WFDC3:XM_002692483:569_cdna 550^736 2 EMBV3_24377 GeneID:505523 13 GENE WFDC3 NULL WAP four-disulfide core domain 3 EMBV3_24451 CCTCAGGGCTGCTGACGCACATAAATTAACCCAGTTGTTTGAAGTAAGAGCCAAAGGGTA Gene BVV0102_044419 + 1 EMBV3_16157 GK000018.2:14377402-14398152 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06090 TGTAAATGATGTGTCTTTAAAGTAATTAGCTTTTATTGTATAATTACAATGAGGCCATAA Gene GeneID:407230|HTR2A:NM_001001157:32_cdna Constitutive 2 NULL GeneID:407230 12 GENE HTR2A 5HT2A 5HTR2A 5-hydroxytryptamine (serotonin) receptor 2A EMBV3_07479 GGACTTTCGGGAAAAGGTATTCCAGCAGTTCAGTGCCTATCAAAAACGTGAACAACAGAG Gene GeneID:784000|SYCP2:XM_002692264:1582_cdna Constitutive 0 NULL GeneID:784000 13 GENE SYCP2 NULL synaptonemal complex protein 2 EMBV3_08118 GAAGCCGGCGCACAACGAGAAGGACTGTGCTGGGCACCAAAGGCAATAAATGAGGAATTT Gene GeneID:100138596|LOC100138596:XM_002691740:235_cdna Constitutive 0 NULL GeneID:100138596 12 GENE LOC100138596 NULL hypothetical protein LOC100138596 EMBV3_20723 CAGGGCACCTGTGGGCGGACTAGGAAAATTGAAGATGATAATAGCCAAAAATGGTCCAGA Gene GeneID:533136|UBE3A:NM_001098462:2_cdna UTR3_Alt 2 NULL GeneID:533136 21 GENE UBE3A NULL ubiquitin protein ligase E3A EMBV3_10165 AAGCCCGTCTTGGAATGTCACTGTCTTGTCCCTCCTGTTGCTCCTGGGTCTGAAATGAAC Gene GeneID:533233|APC:XM_002690404:66_cdna UTR3_Alt 2 NULL GeneID:533233 10 GENE APC MGC140121 adenomatous polyposis coli EMBV3_06709 CCATGATGGAGGCTGACCTACAGACCAAAGCTCTCCAGGGTAAATTGGTAACAATCTTCA Gene BVT0102_085028 + 0 NULL GK000005.2:52138199-52821140 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191839 1 XLOC_117036 Coding TCONS_00191839 XLOC_117036 Coding Coding FAM19A2 5:51599744-52166044 j TSS143688 3536 1 TCONS_00191839_1 131 7 0.993768309673865 0.00419724654485281 0.00425372892847267 0.00294266394311363 0.00266987903772325 0.00241675810729952 0.00107538769690975 0.00268620586328887 0.00259136634247224 0.00552706913172325 0.000193669887259277 4.97693568158509e-05 8.20962654347705e-05 0.000537975045180485 0.000698217783977152 0.000749736602857238 0 5.10388249493347e-20 7.09584419348982e-06 0.00560679938136188 0.00401874712812426 0.00143442984245874 1.49709699871386e-05 5.18893606831094e-06 1.95067505699391e-19 0.00563667561621164 0.00379896936673499 0.00287502242018415 2.15196730687131e-05 5.36826267464079e-06 5.95097731775706e-05 XM_005192325.1 FAM19A2 PREDICTED: Bos taurus family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 (FAM19A2), transcript variant X4, 0.0 4547 100.00 0.712669683257919 NM_178539.4 FAM19A2 Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 (FAM19A2), mRNA. 0.0 2461 81.74 0.708993212669683 TCONS_00191839_1 sp|Q8N3H0|F19A2_HUMAN F19A2_HUMAN Protein FAM19A2; 5e-93 269 100.00 0.99236641221374 1 noncoding 0 0 0 0 -0.0303574098368633 0.837389108957752 0.00136447610315801 0.977985179738805 ATCAGCTGAGACCTATCTGCTAAAAGCCGGAACACAAGCGCCTGCCTGCACTGGGCAACTCCAGCGTCTTGAGGGCGGAGGACAGCGAGCTCGGAGCCTCTTCTCCGTCCTATCCCGAACCTCCCCAGCCACTCGCACGTCGGAGACCCGGGACCTGCGAGCCAGGGAACTGGAGAAATACGCGGCGGAGGCTGCTTTCCTGAAGGTGAACCGTTCCGTCCAATTGCCTTTCCCCAGAGAGCAAACGGGAGGGCGGGAGAGAGTGAACTGAGGATGTGTGCGTGTGTATCTGTGTGAGACGACGTGCAGCGGGAGGAAGAAAAGTCGTTACTCGGCGTTTTAAAAGCAAACAAATCAGAGATGGATAAGAGCGGCGATTGCTGCGAGACCGCCTTGATTCTCGCAGTGTGAGGAGCTGAGCGCACCGCGCGCACCGGCGAGGACAGCGGGCGACCGCGGGCGCTGGCGAGGGCTGGGGACTTTGGCTTCTCCCCTAGCCCACAAATCTTTTGATTACTTTGACTCGTGAAAAACGAGAGGAGGAAAGACACGTCACCTTCCATCCACTTTAAGGGGATTCCAGTTTGGATGTCAAGAGATTCCTGAACCCTCTTTGCTATCGGAGGAGGAAACACACGCGCGCGCGCACACATACACACACGCACGCTCGGGGCCACACTCACACGCCCTCCACTAGCACACACCTCCAGACTTCGTTTCCCTATGCCCCAGAACGGTAACGGCGGATTGGCATCTTGGAAGCGATGCGAGAGCGATAAGGCTGGCGCGGGTCCGCGGAAGCTGCAGGAGCATCGCTAGGTGTTGCCGCCACCAGGAAGCCGGGCTGCAGGGATTTCCTGCCAGGTTACCAGGAGTTATATGGAGGTGTTCCATGTTGTTAACTAGTTATGCAGTACAATATTGTTGCAGGGATTGGATGTAGGAGAGGAGGCAGGATGGTGGCAAAAATGTGAGAAAAAGAAGAATCTCATAACAAAGCTAACAGTAAGAGTGCCAAAAAACCACAAAGGATGAGTAAGAGATACTTACAGAAAGCAACAAAAGGAAAACTGCTAATAATAATATTTATTGTAACCTTGTGGGGGAAAGTTGTATCCAGTGCAAACCATCATAAAGCTCACCATGTTAAAACAGGCACTTGCGAAGTGGTGGCACTCCACAGATGCTGTAATAAGAACAAGATAGAAGAACGGTCACAAACAGTCAAGTGCTCCTGCTTCCCTGGGCAGGTGGCGGGCACCACGCGAGCTGCTCCATCTTGTGTGGATGCTTCCATAGTGGAACAGAAATGGTGGTGCCATATGCAACCATGTCTTGAGGGAGAGGAATGTAAAGTTCTTCCAGATCGGAAAGGATGGAGCTGTTCCTCTGGGAATAAAGTGAAAACAACTAGGGTAACCCATTAACCAAGGTGAAATCAAGTGATCCTCAAGGCTGATTACATTGAACATATGCATACAAACATAATTCATAGGTGATCTTGAAGGAAAAATTTTATACAGCTCCGAAGTGGCACTCTGGAGTCTATTACTTCTGGGGGATTTCATGGCTCATAATCAGCTTCTTGGAATCAAGACTTTTTAGAAGTCCTACATGAACTTCAGTATCATGAAGATTTCATCAGATTTGAACTGCGTTCAACTTGTATAATTGTACTTAAAAAAAGAACTTGAAGTTGCTCTCTGAAGAGTTGGCATTTCTGGATGGTATCAGAGACACCTACCCTTTGGGCTCTTGGCCCCAAATGTGACTGCCTTTCTTGTTTCTGAAAGTCTCTCAAGTGCACTGGCCTTCTGTCATGGACCTGTTCCTGGGTCCTGTGTTCACTGGCTAGGATTGTACATGGCTTCAGTGACATTTCCTTTGCAAACTTCTCCTCTGGCATGGTGTAAACTGAGACAATTTAATTTGTATCCTAACCTTGGAGCTCTGAAAGCCTACATGTTTTAACATCTTAAAGTTGCTTTTGTTAAAGGAATGGAAATATATATCCATTGATAATAGTTATTGTTGGCAAGTTATAGTTATCTGAAAACATCAATCATATAAGAATGTATAGACAAGCTGACATGTTTCCCCAAGGCTAACACACTACTGCAGCTCTCTGTCAGTTAAATAGGTAGTAGTTAGAACTGAATTACCATTTTCATTATATACTCCTATTTGGTACCTCTAGAGTACATTCCCTTTCAGAGTTTTTTTTTTTTTTTTAAGTGAACTTTTTCTTTTATTTTTATCTTTACTTTTTCCCTTCACAGAAATCATCAATGAGCAGTCAAGTATTTAGGTAACATTCAGTTTCAAAAAATTGCCATGGATGCATGTGGGTTTTGATTTCTTAGCTCGAAAATTATTTGCTTAGATTTCTTCTAATATTTTTTTAAACTGTCATTTCTATCTTATTTTTAAAAGGCTGTCTCTTGCTTGATTCCAAGGACTGTTTGAATGCCTATTTGTTTATTCAAGTCTGTTGGTAGAATAAATTGTTCATTTCCTTGGCTTCAAATTTATAAATATTTGTTTCTAGTTTTCCCATTCAAACAATTTCTTAGGTCAGTTTTTGTCCATGTTTTTGTAGTCCTTTTCACATCTGTGGTTTTCAGTTCTAAAGGAAAATCTTACAAATATTTCAAGGCCTTAAACACATATGTACTTTTTTTTCTAAGTTATTCACAGAATGTGTAATTTTATACTACTTTTATTTTGCTTCATTTGTTATGTGGAGGGAAAGAAGAATGGACATTGCATAGCCATTCTGTAACAATATTGTGTAAATGTATAGTTTGAAGGATTGTAAAGGGAGAGGCTTCTGTGTTTACTCATCTTAGATTGATAAGAAGATACTTCAGAAATTGTCCTATTAGACATTCTATTATGTTAGACAGAGTGTAGGTATCTTCTGTGATTTTAAAACTCACTCACATGGCCAATTATGTATATGTTGATTTCCATGATGGAGGCTGACCTACAGACCAAAGCTCTCCAGGGTAAATTGGTAACAATCTTCAAAGACCAATATATTACCCAGAATCTTTTCTCAGCAGAATGACTAACACTGTAAAATTTGTTAAATATGAAATTTGTAAAGTATACTTTTGATATTGAACTAAAGTATACTGACCCATAAATCCATGGAATGACTTTCTTCTTCCATTTTCATTATGCATACAATTAGATGGCTCTGAGTGAATTTTGCAATGGTTCAAGACTGTCTGAACTTGTAAAGAAAGGAGTAATAGTTGTGCTGGAGTTTCTGCATCAGTGATAATATTAATTTCTTTGGAACAAAGTGGAAAATTATATTATTTTAGAAATTATGAATTTGTCCTAGGTTTGAAATTATAGATTATGCTCTCTTTTTTAAACTATGTCCTTTAAAACAACACTGGAAATACTGTATTATATTCAAGTGTAATACATGCATATCAATAGAAAAAATAAATGGAATTTCAAATATACTAACTAGATTATCCCCAGTAATGTTGTGACTCTTCAGAAAAGGTGAATAAAATTGG EMBV3_30618 TGTCTAGAACCAAACTGCCTTAATAAAAGAGTGCTGGGGTGGCGTGCAGGTGGTGGCACT Gene BVT0102_065390 + 0 NULL GK000021.2:34185093-34189054 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08582 CAGTGAACAGGTAGAGCACTTTCCTGGAATCTTTTATTTGTTGTGTGAGGGCAGCCACAG Gene GeneID:539736|JRKL:XM_002692948:38_cdna Constitutive 0 NULL GeneID:539736 15 GENE JRKL NULL jerky homolog-like (mouse) EMBV3_03405 TTCCCGGGCCCACCTTCCCCACTCAAAATGTTTTTCTTTTACCCCAACCAGGCTTCCAGT Gene GeneID:527966|CAPN11:XM_002697260:481_cdna Constitutive 0 NULL GeneID:527966 23 GENE CAPN11 NULL calpain 11 EMBV3_30115 TACCTTCCTGTAGCTGCTGCCATGTATATGGATGATTACCTCGATCTCTTTGGGGACCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15390 ACATGGAGCATCAGTGAGTTGGGCTACATCTGCAGCCACATGTTTGAAGGTCGGATCCTA Gene GeneID:507142|AIM1L:NM_001109791:90_cdna Constitutive 0 NULL GeneID:507142 2 GENE AIM1L NULL absent in melanoma 1-like EMBV3_25000 GGTCTTACCTTGGGCCTCCATTTCCAGTCTGAAGGCTGTGACCAGAGAACATCTTGAGCT Gene GeneID:359714|APTX:NM_182654:8_cdna Constitutive 0 NULL GeneID:359714 8 GENE APTX MGC133769 aprataxin EMBV3_26615 AGTACTGGAGTGGGCTGCCTTCTCCAGATTATCAGTTTGTAGATTAGTTCCTCAGCCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39242 GCAAGTTTGCGACCAAATCCAAGAACAACAGCTGGGCCCCCAAGTACAATGAGAGCTTTC Gene GeneID:526874|UNC13A:XM_002688573:266_cdna Constitutive 0 NULL GeneID:526874 7 GENE UNC13A NULL unc-13 homolog A (C. elegans) EMBV3_08362 GAACACTCTTAAGGTCCTTCTTGACCGGAGTTGTTCTGCCAAGAGCCTTTCGTGGGACAT Gene BVV0102_156364 + 1 EMBV3_15929 GK000013.2:74040826-74043096 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043864 TCONS_00043862 TCONS_00043863 TCONS_00043861 1 XLOC_026056 Coding TCONS_00043864 XLOC_026056 Coding Coding YWHAB 13:74018885-74042561 j TSS32358 2953 1 TCONS_00043864_2 246 0.0419911953945141 7 0.875564941921859 0.000985699525147895 3.4297608446858e-05 2.8730366269277e-08 0.000190529500544009 2.99790043228499e-08 5.55706498775983e-08 0.000392554352236601 3.28791928377362e-06 0.000829782643703047 0.000324928304191971 7.51411018830061e-11 2.01326844677946e-06 2.77701609694728e-10 1.59686210717309e-10 2.52377844499101e-10 3.97512523662306e-10 1.91517700517773e-10 6.08555299362473e-10 4.91126277451062e-08 0.000396029270579015 5.75288205769943e-11 1.37874842390007e-10 1.73329619666018e-10 1.31709353738782e-10 0.000426396310175423 1.89825088642284e-08 5.6186252918841e-05 3.28886062776336e-10 2.45565897503654e-06 1.04298223546303e-10 NM_174794.2 YWHAB Bos taurus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAB), mRNA. 0.0 4376 99.96 0.822553335590924 NM_139323.3 YWHAB Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAB), transcript variant 2, 0.0 2055 84.87 0.608533694547917 TCONS_00043864_2 sp|P31946|1433B_HUMAN 1433B_HUMAN 14-3-3 protein beta/alpha; 0.0 508 100.00 0.995934959349594 1 coding 0 0 0 0 -0.53295685291863 0.0452554975590265 -0.011328940050332 0.809539985148557 GAGCCGGAGCGGAAGTGGTGACCGGAGCGGAAGTGGAGCCGCCGCAGCCGCCGATTCCGGAGCCGGGGTAGCTGCCGCCGCCGCCGCCGCCGCCTCTGCAGCCGCCGCCGTCGCCGGAGGAGTGGGATTGGGGAGGAAGCGGTCACTGCGCCCGGAGCTCCCCTCGCAAGGTTCTCTGCCCCCTGCAGTCCTCCCACGGGAATGACCATGGATAAAAGTGAGCTGGTACAGAAAGCCAAGCTCGCCGAGCAGGCCGAGCGCTACGATGACATGGCTGCGGCCATGAAGGCGGTCACAGAGCAGGGGCACGAGCTCTCCAACGAGGAGAGAAACCTGCTGTCCGTCGCCTACAAGAATGTGGTCGGCGCCCGCCGTTCGTCCTGGCGTGTCATCTCCAGCATCGAACAGAAAACTGAGAGGAACGAGAAGAAGCAGCAGATGGGCAAAGAGTACCGCGAGAAGATCGAGGCCGAGCTGCAGGACATCTGCAATGACGTGCTGGAGCTGTTGGATAAATACCTTATTCCCAATGCTACACAACCAGAAAGTAAGGTGTTCTACTTGAAAATGAAAGGCGATTATTTTAGATATCTTTCTGAGGTGGCTTCTGGAGACAATAAACAAACCACTGTGTCGAACTCCCAGCAGGCTTACCAAGAAGCATTTGAAATTAGTAAGAAAGAAATGCAGCCTACACACCCCATTCGACTGGGGCTGGCACTTAATTTCTCCGTCTTTTATTATGAGATTCTAAACTCTCCTGAAAAGGCTTGCAGCCTGGCAAAAACGGCGTTTGATGAGGCGATTGCTGAATTGGACACACTGAATGAAGAGTCTTACAAAGACAGCACCCTGATTATGCAGCTGCTTAGGGACAATCTCACTCTGTGGACGTCGGAAAACCAGGGAGACGAAGGAGATGCTGGGGAGGGAGAGAACTAATGTCTACCGTGCTTTGTGATCTCTTGAGTGGCACTCTGTACCCTCCACATATATCCCTTTGTGCGATAAAAAAAAAAGAAACGTACGTCGACTTTCAATTTTTCACAGCCTCAGCCTAGCAAAAATGGTCCATGGGATGAACAGCTGGTATTTGTATCTAAAATTCAGATTGGTCACATAAATGCCACGGCATTCTGAAGTTTTGATCTTGATTAACATTGACAGGATTACTGTGTGTTTCATTTAAAAAAAAAACAAACAAAAACTGAACACTGTGATTATGGAGTTTTGTAATTTAGCAGAACTCTTACTGGTAGGAAAAAAAAAAATAGACCTGAATTATGTGTAACTTTTTGGAAAGTTAAATTTGATTCAAAACAGTTGTCCCTGAAATACAGTTCCATTGTAAAGTTGTACAGAAAGTTATAGATTCTATTGTGACACTGGGACTTGGAGTGGGTCACCTCTCATTTGGCATTCGAGTTTCACAGTAATTTCTAGTGATTCTGCCCATTCTGATCAGGGCTTTTAGACACTTGGTATGTTGGGGCTTGTTGCCACTGAAAAGCTCGTGACCACAGACGGCCACAGTGTCTTCCTCCAAGGAAACTCGAAGCCAGAAAAGAACATTCTTGGTCGAGATAACTGGGTTATGACAGCATGCAAAGGTCCACTGCTCATAGACCACCTGTGACTCCAGCCCCTTCCCCTATAGCAGCATGTTTAGTGATTGGCAACTTGTGCTTAGGAAGTGGAATCTGTTTTCCCTTTAACCATGAGCTCAAGATGGAAAAAAAAAAAAAGCCGTGTATCTTATGAATGGCCTTATCTGTTTCCTGGGTACTACCTTTAAGAATAACGCTCTGCAGAGATTGTCTTTCACTTGAGGAGTAAGTACTCAGTGTTTGGGTTCTTCCTAGCTCGGGGCTTTAAAATTTTGAAATCTAAACATTCTTTCCCACAGTCCTTTTTGACTGTTGACTTTAGTCTTCTCTAAATTTCTGTCCTTCTGCTTCCTTACATTTTTTTCTTTGTGCATTCTCTCTCTCTATGCCTTTTGTTCATGGTTTAGTACTAGATGGGCAGGGACAGGGGGTCCACAAGGGGGTGAGGGATGTTCGCGAGCACTTTGGTGAGCCAGCGTTGCTTCAGCGAGTTGAAAAGAGCTTCCCACATTTCAGCTCTGTCTTCCTCCAGTTCTCAGCACGGTGGTTGCTCTTCAGTCACACCAAGATCTGACTCCAAAAAGTATTTTTAAATAGCCATGGTTTCTCTTTATATTGCAGCCAACCCTGATAATGCTTGTTAGCACCTGTCACCAGCTCTCCCAAGGGTACCCATCCCGTCAGGTTCACAGACAAATGTCAGGGAAGTTGCATGAACACTGCGATGGGAGAGTCAGGAATAGCCCGGCCTGCCAGTCTCAGTCTCCACCTTCCTCCCCGAACATTCCACGTAGCTGTAGTGTCCCATCTGTTTGTCCATCTGTTTTACTGAAGCAGGCAACAGGAGAGGCTCAGGGGAAGTATCATTTCAAGGTAGGTTGGACCAATATTTTCAAAAAGGATTCCACACCACAGATGCAAACGAAGGCAGACAGAAGGGTCTTGGTGCTTAGTTTGGGACCACCACCATGACCTTGTTCTGTCAGGTCCTTACAGTTTCCACAGAGGCTGGACTTCGTGAACCTTCGGGGTGGAGCACAGGTGGGTTGGTTTCGCTGAGAGATGATCAGGGAATGTCCCACGAAAGGCTCTTGGCAGAACAACTCCGGTCAAGAAGGACCTTAAGAGTGTTCCGGAATTCTCACATGGAGCCTTCAGTCCCAAATCACCAAGCCGGGGTCGGGGGTGGGGGAGGGTTTCCCTGGCCGTCCAGTAGTTAAGAACCCCCTGTGCTCCAGTGCACCCGGCATGGGTTTGATACCTGGCCAGGGAACTAAGATCCCCATCCTGTGCCGTGGGGTGCGGGCGCAAAAGCAAATCACCAAGAGGGTTCCAGATGGCTGAGA EMBV3_10400 CATCGACTGTGTCATGCGCTGGTGGCTAGTTCCTGGCTTGGAGGCTTTTTTCACTCCATA Gene GeneID:506121|LOC506121:XM_002693587:55_cdna Constitutive 0 NULL GeneID:506121 15 GENE LOC506121 NULL similar to Olfactory receptor 4B1 (Olfactory receptor OR11-106) (OST208) EMBV3_36805 GTGGATCCTCTGGTTCCTCTCCGAGGCTTGGTGGGGTCGTGCTCATCTCTGGGACAGGTT Variant GeneID:508132|NAGK:NM_001034314:8_cdna 263^404 4 EMBV3_05612 GeneID:508132 11 GENE NAGK MGC127109 N-acetylglucosamine kinase EMBV3_33205 TCCAGCTCCTGGGGCTTTCTCCGGCTCTCTGGTTCCCTTCCGCGTAGACTAGGCGAGTTG Gene BVV0102_288757 - 0 NULL GK000003.2:99090208-99427365 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170848 1 XLOC_103670 NonCoding TCONS_00170848 XLOC_103670 NonCoding NonCoding - 3:99146604-99147571 - TSS127558 636 2 0.343685300207039 0.000641776806991614 0.00107435997140051 0.000640213374114552 0.000509216578521438 0.000240648381937785 5.62430011934974e-06 0 0.00140428162328617 0.000111652800092013 0 0 0 0 4.43772733280133e-05 0 0 0 0 0.00102603019569103 0 0 0 0 0 0 0 0 0 0 0 0 noncoding GCCGGTTGAACGCACCCTCTCCGCCCAGGGAACCGGCTCTATCCCAGTCCCCAGGACCTCGCGTCGCCTGTGTGCCCACGCCACCACCCAGCGTCTACACCTCCGCCACGTGCTGGGCTGTGGCAGAGCCAGGGCTCAGAGAGGTCGGGGCGCTTGTTCCAGGCGGCGCAGCAGGCCAGGGGAACCGCAGCGCAGGATTGGGGTCGGCTCTAAAACGGAACTGCGGAGGCAGGAGCGGAACGCTTCCGACTCCCGGGTCCTCTTTGTCGGATCGCGGATCCCTAGCCCTCGAAGACCCTGGTCCTGCGTACTCGGTCCGTGGCGACTTCCAGTCCACTCCCGGCGCCCAACTCGCTTAGTCTACGCGGAAGGGAACCAGAGAGCCGGAGAAAGCCCCAGGAGCTGGAGGTGGCAGGGTCCGCCCTGGATCCCCCGGAGCAGGATTTCTCAGCACACTTGCTCTTCCCTCCCTTCCCCTTTCTTGGGGTCTCTGTGTGTCCCCCTGTCCCGGCTCCCGTTTCCAGTCTCTCTTCTTTCTCGCTCTCTGACCCTATTGACTCCTTGCCCGGTGTCTCGCACCGCCTTTGTCTCTGTCTCTGCCTCTCCTCGGATCTCTGTTGGTGAAGCACCCCCCAC TCONS_00170847 s 3' 56398 TCONS_00170847 s 3' 56398 EMBV3_08056 ACGGTGTGGGCTGTTCCTGAGCCTTTGCCTTCTTAACTCTTGGCTGTTTGTTGCTGGCAT Gene GeneID:526642|WDR59:NM_001101130:112_cdna Constitutive 0 NULL GeneID:526642 18 GENE WDR59 NULL WD repeat domain 59 EMBV3_15468 CTCAGCCCTTGACTTCTACAAGCCCATGGAACATTTCTGGAAAGACGCTCTTGATCCAGC Gene GeneID:407238|ESR1:NM_001001443:2_cdna Constitutive 0 NULL GeneID:407238 9 GENE ESR1 NULL estrogen receptor 1 EMBV3_02473 CACCAGGTGGAGAAGTTAACTACATGACGATCACACAATAACCACGACATGAGCTGCCAC Gene BVV0102_259178 + 0 NULL GK000003.2:36337031-36419628 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173065 TCONS_00173066 1 XLOC_104281 Coding TCONS_00173066 XLOC_104281 Coding Coding NTNG1 3:35969785-36356834 j TSS128751 3341 1 TCONS_00173066_3 461 0.0969769530080814 8 0.991388664971786 7.41583361024481e-05 6.01921343792976e-06 4.1782788545901e-17 6.06832659825817e-50 1.46558131854757e-05 5.15488542626723e-13 2.25612291031711e-24 3.75170569933901e-61 6.4969625157642e-20 1.70518775233064e-13 4.789361577866e-17 4.6850648808442e-18 1.58420106652971e-15 2.58236532993492e-14 2.17395729819014e-22 1.61175160132806e-16 5.64215758794387e-17 3.40496329193234e-12 1.06664559968525e-05 1.21974894603841e-14 1.49910059479178e-26 1.58958707475905e-17 2.19631676126307e-17 2.94082997047277e-12 2.32712810662694e-15 3.215906541816e-05 4.62653384524671e-32 7.91151444383814e-13 4.35031388784414e-14 0 NM_001080369.1 NTNG1 Bos taurus netrin G2 (NTNG1), mRNA. 0.0 5220 100.00 0.865908410655492 NM_133488.1 Ntng1 Mus musculus netrin G1 (Ntng1), transcript variant e, mRNA. 0.0 2915 86.67 0.725531278060461 TCONS_00173066_3 sp|Q9Y2I2|NTNG1_HUMAN NTNG1_HUMAN Netrin-G1; 0.0 754 74.72 0.993492407809111 2 coding 0 0 0 0 0.056378421211891 0.610886336730713 -0.0408693741382256 0.443230586816089 GGGCACGGGGAGGGTGGTGGATATCTGTCCAAAGGCTGATTCCCTCCCCACTCTGACAAGCAGGGGTTGCACGAGCTTTTACAGACAGAAGTAGGGGGGTGGCTACATGCAGAAACAGCATAGTCATCTCTAGCAGTAATCTTCAAATTGGTCATCAGTGGTCTGGCCAGAATCACCTTGATTGTTTTAGGTACAGTTAATTTTCAGTTCCAGGGTCCATTTGTTTCCATTTCTTTGAGGCCAAGTCTCAGAATTGTGGCAGCTCATGTCGTGGTTATTGTCTGATCATCATGTAGTTAACTTCTCCACCTGGTGTATTAGTATCTGAAAGGGCAGAGTTGCTCTTTTTCCATTACCCCATGCATTTCATTCTAATTCAGCTTTAGCCAGCTTCAACAGGAGCTGAGTTCTCCAACTGCAGAAGCAGCGGCTGATCAAGACCAGCAAAAGGGTGTTGGTGCCAGAAGAGAAGAATGATTGATGGGAAGCAGACACCGAGCGATAGACACTCGTCCTGTTGCTGTAGCTACTGATACCTCAGTGCGCCTGAGCATCCCTTGTGAACTGTGAGCATCAAGCACCCAGGGTTATTGGATGTACAATAGGAGAGCCATCGTTTTGATAAATCCTTATCTGCTACTGGACATCTTTTATAAAAAAACCAAGCTAGACCCAAGGCTAATAGATACGTTCTAGGACAATGAAAAAGCTGCCAGTCGTTGCTAATGCCTAGTGCACAAGTATGCTAGGCTTCCACCAAAGTCCTCAATATACCTGAACATGTGCAATATATGAACCCTTCGCTTTTAATTTTGGAATCTACGTTGAAGTCTCATCTTCTTTTTCTTTTTTTTTTCTTTTTTTAATATACAAACCTACCTACGTATAGACATAGATAAGCTGCTTTAGTTACCACGAAGATTGCCAAGAATTTAGAGATGTATTTGTCAAGATTTCTGTCAATTCATGCCCTTTGGGTTACAGTGTCCTCAGTGATGCAGCCCTACCCTTTAGTGTGGGGACATTATGATGTGTGTAAGACTCAGATTTATACCGAAGAAGGGAAAGTGTGGGATTACATGGCCTGTCAGCCGGAATCCACAGACATGACAAAATATCTGAAAGTGAAACTGGATCCTCCAGACATTACCTGTGGAGACCCTCCGGAGACGTTCTGTGCAATGGGCAACCCGTACATGTGCAATAATGAGTGTGATGCAAGTACCCCAGAACTGGCACACCCACCGGAACTGATGTTTGACTTTGAAGGAAGACATCCCTCCACCTTTTGGCAGTCTGCTACTTGGAAAGAGTATCCCAAGCCTCTCCAGGTTAACATCACTCTGTCTTGGAGCAAAACTATCGAGCTAACAGACAACATAGTTATTACCTTTGAATCAGGGCGTCCAGACCAAATGATCCTGGAGAAGTCTCTTGACTATGGACGAACGTGGCAGCCGTATCAGTATTATGCCACAGACTGCTTAGACGCTTTTCACATGGATCCTAAATCCGTGAAGGATTTATCACAGCATACGGTCTTAGAAATCATTTGCACTGAAGAGTACTCCACAGGTTATACGACAAATAGCAAAATCATCCACTTTGAAATCAAAGACAGGTTCGCATTTTTTGCCGGACCTTGGTTACGCAATATGGCTTCCCTCTACGGACAACTGGATACAACCAAGAAACTCAGAGATTTCTTTACGGTCACAGACCTGAGGATAAGGCTTTTGAGACCCGCCGTCGGGGAAATATTTGTAGATGAGCTACGCTTGGCACGCTACTTTTACGCAATCTCAGACATAAAGGTGCACGGAAGGTGCAAATGCAATCTCCATGCCACTGTGTGCGTGTATGACAACAGCAAACTGACCTGTGAATGTGAGCACAACACTACAGGTCCAGACTGTGGGAAATGCAAGAAGAATTATCAGGGCCGACCTTGGAGTCCAGGCTCGTATCTCCCCATCCCCAAAGGCACTGCAAATACCTGTATCCCCAGTATTTCCAGTATTGGTAATCCTCCAAAGTTTAATAGGAAATGGCCGAATATTTCTTCCCTTGAGGTTTCTAACCCAAAACAAGCGAATGTCTGCGACAACGAGCTCCTGCACTGCCAGAACGGAGGGACGTGCCACAACAACGTGCGCTGCCTGTGCCCAGCCGCGTACACGGGCATCCTGTGCGAGAAGCTGCGGTGCGAGGAGGCGGGCAGCTGCGGCCCCGACTCCGGCCAGGGCGCGCCCCCGCGCGGCTCCCCCGCGCTGCTGTCGCTGCTGGCCGCTCTGCTGGGGACAGCCGGCCCCCTGGGCATCTAGGCGGCGCACCCAGCCACCAGACGGGCCGTGCTCTGGGGAAGCAAACACAGCCCCAGCATTTGCTACTAACATAGGAAACCCGCTCTCAGACACTCCCACTCAAACACAGTGTACAAAGAAGGCCTAACTGAACTAAGCCATATTTATCAGCCGTGGACAGCACACCTGAGTCAAGACTGTTAATTTCTGACTCCCAGAGGAGTTGGCAGCTGTTGATATTATCACTGCGAATCACATTGCCAGCTGCAGAGCTTACCACCCATCGGAAAGGCTGTGACAGCCCCCCAAAAGGAAAGAACAACAGCAACAACAAATCAACCAACCTAAAAACATTTGCTACTGGCACGTGGTGTGCCCCAGCACCACCTGGCCCTGTGTGTGGACCAACCAAATAGAAGCATCTTTTGCTGGCAGTGCTTGGTGGGTCTAAGGAAGTCTGTTACAAGCTGCCATATTGGCCTGCTTCAGCCCCTGAACCCCCTTCCAACCTGTGCTTTAGTGAACCGTTGCTCTGTAACCCTTGGTTGAAAGATTTCTTTGTCTGATGTGAGTAATGCACACGTGTAACAGCCCCCTCCAAAAGCTCCAGCCAGTCATACCCTGTGTATCTTAGCAGCACTGAGTCATCCCAGTGCCAGCACACATCCACTGTCCCCAAGAGTGGCTACAGGAAAAAAGAAAGTGTATCTATCCTTTTGTATTCAAATGAAGTTATTTTTCTTGGAATACTGTAATATGTAGATTTTTTGTATTCTTGCCAATTTGTGTTACCAGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACATTTATTTTGTCCTCCTTCCGTTCTGTTTTGTTTCATTGTGCAGAGATTTCTCTGTAAGGGCAACAAACTTGCTGGCATCAAAGAATATCAGTTTACATATATTAACAAGTGTAATAAGATTCCACCAAAGGACATTCTAAGTGTTTTCTTGTTGCTTTAACACTAGAAGATTTAAAGAATAAAAATTCCTGCATAAACGA EMBV3_07929 GTGCATGAACATTTCCCAGATTTCCATGATTTCATCGGAGTGTCTGGTGGTTGGAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25584 TTCTCAGCAGGGCGCTGCAGGAGCACCTCCAGGGGCAGCCTCGGGACCCAGTTTATTAAA Gene GeneID:526331|GALNTL1:NM_001101127:133_cdna Constitutive 2 NULL GeneID:526331 10 GENE GALNTL1 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 EMBV3_23964 AACAACGCTGTGGATGAAAATGGTGCCAAGATGATCATCGAGCCCACCAGCCCCTGCCTT Variant GeneID:505489|TIMM50:NM_001035024:544_cdna 301^381 1 EMBV3_40986 GeneID:505489 18 GENE TIMM50 MGC128406 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) EMBV3_23145 ATCCGCGAGCAGCACCCCAGCAAAATCCCGGCGCCGCCTGCAGCTCAACCCCACTCAGGC Variant GeneID:514547|MAP1LC3A:NM_001046175:1063_cdna 234^340 1 EMBV3_04964 GeneID:514547 13 GENE MAP1LC3A MGC138125 microtubule-associated protein 1 light chain 3 alpha EMBV3_18849 CCCTCACCGTCAGCTCTCACTAACTCTCCCTCATGCATTTGATCTCTGCTCTTTGTTCAC Gene BVT0102_339890 + 0 NULL GK000024.2:47152530-47196245 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04342 CAGCCGGACCAACTGCAACTGACATTCAAAGCTCGTGGAGATGAAACGCAAACCTCCGAA Gene BVT0102_192913 + 1 EMBV3_10041 GK000004.2:117730634-117819450 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185482 TCONS_00185483 1 XLOC_111598 NonCoding TCONS_00185483 XLOC_111598 NonCoding NonCoding - 4:117804325-117810675 - TSS137887 1832 3 TCONS_00185483_3 99 0.060589519650655 2 0.711765632383052 0.000118826758982308 0.000109698807764567 0.000120065328033934 0.000512210224372412 0 1.95246127630173e-06 9.54961109967905e-06 1.29140937150224e-05 6.55141486116441e-05 0 0 1.95168357438501e-06 2.15613882531203e-12 0 6.44550891920533e-05 0 0 0 2.34852932298286e-05 0.000208048975564274 0 0 0 5.49058080233809e-05 8.32021793834793e-05 0.000365348003102085 4.15767415534336e-05 0 0 0 NM_001039350.1 DPP6 Homo sapiens dipeptidyl-peptidase 6 (DPP6), transcript variant 3, 1e-52 212 70.46 0.276200873362445 0 noncoding 1 1 1 1 0.0422172262446902 0.774873340090809 0.00701067920049044 0.918106619122442 GCCAGAGGCCCCGGGCACTCGTGCAGGCCCAGCTGGAAGGGCTCTGGTCCCATCTGGCCACAACCAGCTCAGCGCCAACCGGGCACAGCTGACCCCCCAGTTCCTAGGAAACAGCCGCACAAAGGCTGGGCTACATCAGACTTACTGACTTAAAAACGACAAAGTGAATGAGTCTCTAGCAGATGTGGGTTTGCTGACGCCTTCTAGTGAGCAACGCAGGGGCCTCAACGGAGAGCCAGTTTTACTGCTAGTGCTGGGCAGGGGCTCTGCGTCTTCCCCTTGAAACTTCAGACATGAAACTCAGATTCACGTCCCTGGGTGATCCCTGGACTTGACCGGTCCCGCCCTTACTACCATCAGGGCTATTGCTACTGTGGACGCAGGTTTTAGGAGCTGCACGCAGACCCCTGAGGACACATCAGACCTGGTCAGGGCCCAGCGAGGACCGCGAAGACTTCTTAAACGTCGGCATGCTTTTTGGGGTGAAGGGGGTGGAGGATAAGCAAGAAAAGAGCTCTCGAGTGGTAAAATAATGTTTTATTCCATGGATGAACACACTACCATGCCACACTTCACTCCCTCCTGCCAGATCTCATGGCCAGGGCCGGCCTCCCCTTTCAGACTGAGCTGGCTGTGCAGTCGGTCAGGCCCTGACAAGACAAAAAGCATGGCCAGCTGGCACTCGGAGTGGTCCTGCGGGCGGCACCTTCATCCTTTTCCCAAACGCTGATGTATCACCTGAAACAATCCCATGACGATCTTCCAGCCGGACCAACTGCAACTGACATTCAAAGCTCGTGGAGATGAAACGCAAACCTCCGAACACCAAAGAGTGACGCGGACCTGTCTTCTCTGCAGACGAGGATGTCAGGGACCTCCTGCTCCCCGGCGGGAGGGGGACCCGGAGACATCGGGACTGACGTTCAGGCTGTCAACCAGCTCCAGAGGCGATGACGGTCTTCGGTGCGTTTCCAACCGGCACTCGTAGAGACAGCAGCTTGGCCAGGCTGCGGGCATGCAGGCGAAACATGACGAGGGCTTGGCGGAGGGCGGGGGCAGCGGCGATGGCTGACCGCAGTCCTGTCTCTATATACAACGGAGTGAGATACACACGGACGCTGGCTGTGCCTCTGAGCAGAGGACGCCTCACGAGGCCAGGCTGGAACGTCGCCGAGGCTGCTTGCGTGCAGGGGGTGGGGCGGGGGCGATGCTGGCACGGGCCCCCGCTTCCCTCACCCGAGCACACGTGACGGGCCTGGAGGTGGAGCCAACGCTTGGTCTTTTCATGTTCTTTAACCAAATGTCATCTGAAAAGACGACCTACCCAGGAGGAAAAGGACGGGCTTCAGGACGCGTGGAAACGGACGGCGCGAATCTGAGCCGGACCCTGACGCACTTGGTGGGGGGCGGGTTTTTATTCACGACCCTTTAGTGAACAGTGCTGGATGTCGTTTGCAGTATTTTTGAAATGTCCCCACAAGTCTAGAGACGACCTTGAGGAGAAAGCGTTACTTCTGATCTGGTTTTTTTTAATCCAAACAAGTGCAAAGCCTACATACTGACTGAACGAAACCAAGCAAAACAAAGCAAAGCAAAAAAAAAAAAAAGCACACAGCAAAACAACCCCGTGACCAGAGACAGTGTCAGGTAAAAACCATAGAAAAATACAAACAAATTCCAGAAGGTTAACCATTAGCATCAGCTACAGTGACACTTTGTACAGCCCCTTAAAATGCGGAATCTCCTAATTACAGACAGGAGCAGGCCAATCTAGGGACAGGTACTGTGAAAATAATTGTGCTCTGGTTGGTCCATGGCGCGGTGACCGTCAC TCONS_00182987 TCONS_00182991 r 3' 234 TCONS_00182987 TCONS_00182991 r 3' 1941 EMBV3_36071 TCTCATGACCCCCCGAAACACACACAAACTGACTCCCAGACTCTCCATATCTGATCTTGC Gene GeneID:523430|SLC25A41:NM_001075841:60_cdna Constitutive 0 NULL GeneID:523430 7 GENE SLC25A41 MGC151925 solute carrier family 25, member 41 EMBV3_20910 TACCTTCCTGTAGCTGCTGCCATGTATATGGATGATTACCTCGATCTCTTTGGGGACCCC Variant GeneID:281156|FDPS:NM_177497:22_cdna 652^729 3 EMBV3_30115 GeneID:281156 3 GENE FDPS MGC134236 farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) EMBV3_09163 AAAATGTTGCTCTGAACAGTCCCTCAGTTTTCTTTGCCCACCATCCTTGTCCTGTGTGGG Gene BVV0102_160880 + 0 NULL GK000002.2:126807058-126816628 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106646 TCONS_00106645 1 XLOC_062861 NonCoding TCONS_00106646 XLOC_062861 NonCoding NonCoding LOC614290 2:126810720-126816922 o TSS78454 1193 2 TCONS_00106646_1 51 2 0.807934204160619 0.00031932660573076 3.3691408399905e-05 0.000477049097295958 0.000748278125069019 0.000277272099337238 4.16872936201906e-07 3.91058963189286e-05 3.47044273600978e-05 0.00012565988557821 3.23182661486173e-05 1.77670160505622e-05 8.99078752324372e-06 0 5.78173303070601e-10 9.60947042718179e-05 0.000531325514653672 1.95380235518644e-09 2.10317753380613e-05 0.000679223974142089 0.000247148340032531 0 0.000180309876983094 0.000353694878994652 0.000674518755102987 1.40075061562617e-11 1.57688132865372e-05 5.94074462032115e-10 2.76591104903503e-05 5.63934475067344e-05 0.00016630674587072 XM_005197595.1 TRNP1 PREDICTED: Bos taurus TMF1-regulated nuclear protein 1 (TRNP1), 0.0 2152 100.00 0.999161777032691 NM_001013642.2 TRNP1 Homo sapiens TMF1-regulated nuclear protein 1 (TRNP1), mRNA. 5e-177 625 78.69 0.636211232187762 0 noncoding 1 0 1 1 -0.543584335892575 0.00545481541604434 -0.0289530464976643 0.739981228007182 CACCGCGTCTTCCTGGCGGCCGAGCTGCGCCTGGCGCACCGCGCCGAGAGCCTGGGCCGCCTGGGCGGCGGCGTGGCGCAGGCCGAGCTCTACTTGGCGGCGCACGGGCCGCGCCTCAAGAAGGGCTCGCGCCGCGTCCGCCGCGCCCGCCCGCCCGCGCTGCTCGCCTCGGCGCTGGGTCTGGGCGGCTGCGTGCCCTGGGGCGCCGGGCGCCTGCGGCGGGGCCACGGCCCTGAGCCGGAGTCGCCCTTCCGCCGGAGCCCGCCCCGCGGCCCCGCCTCACCCCAGCGCTGACCTCCGGCGCCGGGACCCCTGGCCACCCCGAGAGACCACCGCCTGGGTGGCGACCGATGGACTGCGGACGCCGGCTGGGTAGAACGACGTCACCGACGCGGATGGACAGATTGGCCGACCACAGGAAGAGACAGTCGGGGGGCCGGGGGCCCAGTAAAGAAGGAGAAACCGAGCTCCTCCCAGCTCCTCCCGAGCCTCAACTCAGGATCTGACTTCTGGATTCTGCTCCTTTCACCTCCTTCAGGAAGACTTCTCTAATCAGCCCTGCACAAGCGGAGCACCCTCCTCACCTCAAAGGAGCCCCTCACTTGACAGTGGCAAGGGGCTGGGTTCTAGGGAAGTTGCCTCTACTAGGAATTTATATGTTCCCGCATTTGACTCTGGCTTACATGGTACAACTGGGGATGTTACAAGTCCTTTGAGATGCAATCAGATTAACAGAGCAGCAAACCTTTCCACTGAGAAAAGGATTTCTCTTTAAAAAACAAGTCTCAGCGCAGCTGGGGTCCCCATTTTGGTAGGTGCCGTTGCTGCTCAGTCAAACAGTGGCAGGAGGGCTGTTTGAGGGAAAATGTTGCTCTGAACAGTCCCTCAGTTTTCTTTGCCCACCATCCTTGTCCTGTGTGGGTGCCTGCCTGCGGCCCCTCAGAAAGATAATGGGCTGCTGGCTCCCAGGGGAGACACCTCTTTCTCGGGAAGAGGGGTTGACCACATAAAAATATTAAGTTTTAAATGAAAAAAGGGAGCACTTGATTCAAATATCTTGATGGTAGACGGAAGGGGGCCAGATGGACTCACACCTCACCCAGAACTTGTAGAATTCCACAAAAGGAATGCATATGGAGTCAGTTGCCTGTTGTGTGCATTCAGGAAGAATAAACCTCAGTGATGTGAGATCA TCONS_00103823 r 3' 3662 TCONS_00106647 s 5' 0 EMBV3_26952 GTTGGCCATCTGCAGCTACCTTGTTCTCCCAACTCTCTTTAGAGCACCATCTCTGGAAAC Gene GeneID:539395|C19H17orf59:NM_001040565:93_cdna Constitutive 0 NULL GeneID:539395 19 GENE C19H17orf59 C17orf59 MGC128909 chromosome 17 open reading frame 59 ortholog EMBV3_38262 CTTGAGGGCTTCCCGAACGAGCCCAACGGCACAAACCGTGCCATCCACGTGCACCAGTTT Gene GeneID:532481|SOD3:NM_001082610:189_cdna Constitutive 0 NULL GeneID:532481 6 GENE SOD3 EC-SOD ECSOD superoxide dismutase 3, extracellular EMBV3_18230 ACCACCAGACACAGCGCTTTCGGCTGGACAACTTGCTCAACATGGCCTATGGAGTCAAGA Gene GeneID:520376|ELAVL3:XM_002688873:250_cdna UTR3_Alt 3 NULL GeneID:520376 7 GENE ELAVL3 NULL ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) EMBV3_12543 TATTCAACAGTGAAAATGAGTCATACAGAGAATTACCTAAAGACCTCAGAATACAAACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32484 CGAAGTTATTCAGGGATTTGCCCTGGGGATCAAGTGTGGGGCCTCCTACCAGCAGCTGAT Gene GeneID:282389|TXNRD2:NM_174626:22_cdna Constitutive 1 NULL GeneID:282389 17 GENE TXNRD2 NULL thioredoxin reductase 2 EMBV3_31074 CTTACCAAGAAGGAACGGGTTGTTGCTCCGAGTTTCCATCTCATACAGTAGAGTCACAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21737 ATTCTGAAGATAACGAGATAGGCGCACGTTTCTGTCAACCCATTCGACGCTGAGTGGCAG Gene BVV0102_441768 - 1 EMBV3_33691 GK000005.2:60300501-60372423 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199647 1 XLOC_121300 NonCoding TCONS_00199647 XLOC_121300 NonCoding NonCoding - 5:60307058-60307762 - TSS149215 704 1 TCONS_00199647_2 139 1 0 1.93262720054111e-05 0 0 0.000106161018999406 0 0 0 0.000672127329795491 0 0 0 0 1.22270742105563e-05 0 0 0 0 0 0.000285207714644182 2.04302120915694e-05 0 0 0 0 0.000186990245830542 6.00466271101564e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.135843248420412 0.454581191032757 -0.00618465446071591 0.927861680702551 GGCGACCATGGACCTGTGGCTTGGCGGCCTGAGGGAAGAACCCGGCGCCCGGGCTCCACCTGGGAACCCGGGGGATGGATGTTCCTCTGCGCCGCCTGTGGCTCAGCGGGGACGGCAGAAGCTCCTCCTGGGCGGGTTTCGCACTTGTCGTAGCTTTCGGGGCCTGGGAGGGGGCATCCAGTGTTAACTCCAAGCAACTGAGATGCAAAATATTCCCCGGACGTCCTTACCCCTTCATAGAATTTCTGCCACTCAGCGTCGAATGGGTTGACAGAAACGTGCGCCTATCTCGTTATCTTCAGAATCTGCCCGTATTGACTGGCGTAGAAAGTTTTCCAGAAAACATTTCCTTTCTGAGGAGGCAGCCAGGTGTGAGCTCAGGTGGCAGTGAGTGCTTTGAATTTGGCTTCCTCAGACAGCAAATAAGTTTCCAGAATGGGAAACAAGATGTAAGGGAAACGAAAGTCGCTTCTGTTCAAAATTACTTTACCTGAAACTGCCAATTTAAGGTAATGAAGTAGTTTCCGGAAAGAAACGGAAGGAAGAGACTCGGGGAGAAAAATCTAGAGAAAAGTCAAGCCTACAGGTACGGAAAGATTAATCCACTAGTATTTATTGAGCTTTTATTTATACTTTGCGTTCGACTCTGAGCCATTTGTGCTCTGTTTCCCCGTGGGGAAGATGGAAAATGAAAAGAACCAGCG TCONS_00192157 . 3' 6559 TCONS_00192157 . 3' 7262 EMBV3_07172 ACTAGACCAACAGGGACTAGAGGCAATGGGTGAAATTCCCAGGCTCTTCCCCTCCTTTGA Gene GeneID:504700|ACPP:NM_001098866:19_cdna Constitutive 0 NULL GeneID:504700 1 GENE ACPP MGC159906 acid phosphatase, prostate EMBV3_00299 TGGTGGCTACATCCTTGTAGGCATGGAGAGGCCCCAACTGGAGAAGAGCAAGCATCGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08217 GCAGCCATGTTGTTCAGTTCTGGAGTCTTTTGGATGGGCCTGTTATTTATCCCTGTGGCC Gene GeneID:317692|ATP8A1:NM_174838:14_cdna Constitutive 0 NULL GeneID:317692 6 GENE ATP8A1 NULL ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1 EMBV3_41694 TCAAGGGAGGGCCTAAAGCACTTGTAACTTTGAACCGTCTGTCTGGAGGTCAGAGCCTGT Gene GeneID:540959|CRTC2:NM_001076250:207_cdna Constitutive 0 NULL GeneID:540959 3 GENE CRTC2 MGC139531 CREB regulated transcription coactivator 2 EMBV3_16925 ACCGCTTCTCCCATCCTTGTCCATCTGACCTGGCTTCTGACTGGTTTTCTGTGCTGAACA Gene BVV0102_112917 + 0 NULL GK000028.2:39542181-39586589 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17160 CATTGGGGCCAACGAGAGTGTCTCACTGAAGCTCACTGTGCCTAAGAACCTGCTGATGTT Gene GeneID:513586|MPI:NM_001035284:79_cdna Constitutive 0 NULL GeneID:513586 21 GENE MPI MGC127578 mannose phosphate isomerase EMBV3_42835 GTCTTACAGCAGAGACCCAATGCCAACGCTGTGCGGTCGATGGAGAAGGTCATTGAAATC Gene GeneID:517559|LOC517559:XM_002686597:72_cdna Constitutive 0 NULL GeneID:517559 3 GENE LOC517559 NULL similar to histone deacetylase 4 EMBV3_27316 CCCGCCGCGGGCCACCAACCGTGGTTACAGGGGAGCTCTTTGCTCAGGCCCCAGTGGATC Variant GeneID:509439|NECAP2:NM_001015562:108_cdna 102^202 4 EMBV3_22192 GeneID:509439 2 GENE NECAP2 FLJ10420 MGC134076 NECAP endocytosis associated 2 EMBV3_39056 ATGGGGATCAGTCATGGGTATGTATTGTACACGGGGACTACGTAACTGCAGCAGGGCTAT Gene BVV0102_237678 + 1 EMBV3_05765 GK000007.2:39134101-39191686 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220377 1 XLOC_133694 NonCoding TCONS_00220377 XLOC_133694 NonCoding NonCoding - 7:39145527-39146117 - TSS164375 590 1 TCONS_00220377_2 78 1 0 0 0.000476874680530162 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000179061899822882 2.81394699427914e-06 0.000212634882510209 0 0 0 0.000150928818580479 3.10984382115526e-05 2.84146208514764e-05 0 0.000525425753889872 0 0 0 0 XM_005202962.1 ARMC9 PREDICTED: Bos taurus armadillo repeat containing 9 (ARMC9), 4e-136 488 86.18 0.711864406779661 0 noncoding 0 0 0 0 -0.225898126990027 0.218593646189441 0.0833647255699397 0.211107020027576 GAGGTGAAGCACAGTTTATTATGCCAGAGGGTCCAAGGGGAATCAGTTCCCAACAAGGACCCTGATGTTTCTGAGCGGCCCAGTTTTATACCCCCCGCTATGTGACAGGTTACATGTTAGCAACCTCTCTGTTGTATATGACTGAGTTTTACAACAAGTAGGTGCCAGGAGAACAAACAATTAAGGTTAAAGGGGGGAAACAATGATTATACATCAAGGGGGCTGTCTCCTTGGTTAATCTAATGGGGGCAGCCTGAGCTCAACCACAATCTCCATTTGTCATCTGTAGAGAGGGATATCTCCAGGAGACCTGGTTTTCATTAGCAACTGTTTCCTCACTATTGGGCAAAGTTCATGCCCATTTCACATCTTGTCTTTAGGATGGATGACAGGCTTCAAGATGGAGTCTCTCTTGCTTCTCCCACACTGGCCCCAACATTCCCCCCTCCTGATGCTCATCTTATCTTTAATGATGGGGATCAGTCATGGGTATGTATTGTACACGGGGACTACGTAACTGCAGCAGGGCTATCAGTCTGGAGGTTACACATTGAGTTATACACTGGAGAATACAAGGCCCCCAAATTAAC TCONS_00216535 TCONS_00216536 . 5' 11366 TCONS_00216535 TCONS_00216536 . 5' 11366 EMBV3_31624 CCTGATGCCCTGGGTGGACATTTGAGTTGTTGCTTACCGCTGCTGAGAGACTCACTTCTT Gene GeneID:517656|NFS1:NM_001099001:1105_cdna Constitutive 0 NULL GeneID:517656 13 GENE NFS1 MGC160117 NFS1 nitrogen fixation 1 homolog (S. cerevisiae) EMBV3_31561 TCAGCGGCTGGCAGCTCAATCTGGACTCTATGAAAGTGAAGAACTTTAACCACTCTACCA Gene GeneID:507884|MYOT:NM_001075335:13_cdna Constitutive 0 NULL GeneID:507884 7 GENE MYOT MGC140017 myotilin EMBV3_42945 AATCAGAGCCTGAGAATTCCCTGTTGGAACCAGTGATTAGGAATAGGTACTTCCACTGCC Gene BVT0102_224437 + 0 NULL GK000002.2:5822720-5867811 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40774 CCTGTGAAGCCACAGTTGTTCTTGGCTGAAGGAAACAGAAGGACACAGTACCATGAGTTC Gene GeneID:515731|PLXDC2:NM_001077928:100_cdna UTR3_Alt 2 NULL GeneID:515731 13 GENE PLXDC2 MGC139970 plexin domain containing 2 EMBV3_25839 GTGGCACCGTTCACTGCTTACCGCATAAGCTATCTTCTTGGGGGCTTTCCTAGTATCTTC Gene BVV0102_234398 + 0 NULL GK000003.2:57792194-57817815 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173536 TCONS_00173535 1 XLOC_104377 Coding TCONS_00173535 XLOC_104377 Coding Coding - 3:57805060-57807399 - TSS128978 501 1 TCONS_00173535_1 48 0.994011976047904 2 0.786569717707442 0 2.00567488746195e-05 0 0 0 0 0 7.08349556467208e-05 0 0 0 0 0 0 1.95856410689136e-06 0.00108711447748035 3.57603880458502e-05 0.000450606000106802 0 0 0 7.40586580849454e-06 1.83114667590131e-05 0.000133822815569908 0 0 0.000300161025519294 7.77670061084319e-09 3.83756719504611e-09 4.26809118185323e-09 XR_083420.2 LOC510382 PREDICTED: Bos taurus guanylate-binding protein 6-like (LOC510382), 7e-75 284 90.87 0.409181636726547 NM_020729.2 ODF2L Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), 2e-45 187 74.92 0.588822355289421 TCONS_00173535_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 6e-09 52.0 51.28 0.791666666666667 0 noncoding CCCTTCTGATGTCTGTGTCAGAAGCTTTTTCTGTCACTTTCACTTTAAATAAAATCTACACAAAGCTCTGAGTGACTGAGTTAAATCTTCTCCTTTGGAGACCATGAATCTGGTGGCACCGTTCACTGCTTACCGCATAAGCTATCATCTTGGGGGCTTTCCCAGTATCTTCAAGACAAGATATTGAAGAATCCTTGCATCCCTTAACAAGTCGTGCTGGGAAAACTGGTCAACCACTTGTAAAAGAATGAAACTAGAAGACTTTCTAACACCATATGCAAAAATAAACTCAAAATGGATTAAAGATCTAAATGTAAGACCAGAAACTATAAAACTCCTAGAGGAGAACATAGGCAAAACACTCCGACATATATCACAGCAGGATCCTCTATGACCCACCTCCCAGAATACTGGAAATAAAAGCAAAAATAAACAAATGGCACCTAATTAAAATTAAAAGCTTCTGCACAACAAAGGAAACTATAAGCAAGGTGAAAAGAC TCONS_00170044 r 5' 11332 TCONS_00170044 r 5' 9314 EMBV3_36339 ATGGACAACTACCTAGCCCACCTGTGACCTGGCAGAAACTGCTTCTCTAGTAATAGTATC Gene GeneID:768077|ORMDL1:NM_001077133:57_cdna UTR3_Alt 1 NULL GeneID:768077 2 GENE ORMDL1 MGC137701 ORM1-like 1 (S. cerevisiae) EMBV3_39012 GAGTGGACCAACTTTGTGTCCTATCAAAATAACAGAGGCAACCATTAATTATTACCAGCG Gene BVV0101_040208 + 0 NULL GK000005.2:70911251-71178016 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07264 TCTGTACTTCAGAAGCAGACCGTCAAGAAGCCTGAAGAGAGCACTTTCTCTGTCAAGACA Gene GeneID:513649|CCDC43:NM_001098962:239_cdna UTR3_Alt 3 NULL GeneID:513649 19 GENE CCDC43 MGC159622 coiled-coil domain containing 43 EMBV3_27508 GCTGTTATGTCTCTGTGTGGAATGCCTTGGTAAGGGACATTGGTGTTATGACTGTTCTCG Gene GeneID:539464|PCDH18:NM_001102229:47_cdna UTR3_Alt 2 NULL GeneID:539464 17 GENE PCDH18 MGC165815 protocadherin 18 EMBV3_15842 CATGGGGCAGTGGGAAGGCTTTTGGTCAACTCAGAGAAGCACAAGATCAGAGAGGGGTAA Gene BVT0102_033886 + 0 NULL GK000025.2:35300207-35731681 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11023 CTCCCACTTGTAGAATACCTTCTACTTTCTGTTTTGCTAAACTGAATCTATGGCTTTAAA Gene GeneID:509221|DAB2:XM_002696368:66_cdna Constitutive 3 NULL GeneID:509221 20 GENE DAB2 NULL disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) EMBV3_38872 TGCACGGAGCACAAAAGAAGGAGCCAAAGGCCAGCAAATGTGGAAGGGGGCTAATGCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22867 AGAGACCTTCTTCAACACGTCTCGAGGCCGGATTCCCCTACCATGGCTCGGGAGCAATGA Gene BVV0102_196997 - 0 NULL GK000008.2:38625363-38683641 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00063808 TCONS_00162571 TCONS_00054133 TCONS_00142473 TCONS_00010832 TCONS_00218950 TCONS_00231771 TCONS_00131534 TCONS_00230831 TCONS_00186556 TCONS_00117596 TCONS_00240372 TCONS_00210949 TCONS_00167122 TCONS_00231774 TCONS_00255144 TCONS_00186493 TCONS_00063807 TCONS_00158397 TCONS_00131539 TCONS_00098199 TCONS_00240374 TCONS_00149043 TCONS_00116087 TCONS_00149042 TCONS_00111145 TCONS_00232767 TCONS_00222116 TCONS_00231768 TCONS_00186557 TCONS_00158314 TCONS_00186834 TCONS_00230833 TCONS_00071397 TCONS_00011614 TCONS_00131537 TCONS_00230828 TCONS_00178734 39 XLOC_090915 XLOC_038534 XLOC_099452 XLOC_031942 XLOC_086898 XLOC_006383 XLOC_132269 XLOC_141259 XLOC_080239 XLOC_140321 XLOC_112608 XLOC_071762 XLOC_147036 XLOC_129459 XLOC_101958 XLOC_141262 XLOC_158076 XLOC_112545 XLOC_038533 XLOC_096851 XLOC_080244 XLOC_058445 XLOC_147038 XLOC_090920 XLOC_070256 XLOC_090919 XLOC_067045 XLOC_142251 XLOC_135425 XLOC_141256 XLOC_112609 XLOC_096768 XLOC_112885 XLOC_140323 XLOC_043168 XLOC_007165 XLOC_080242 XLOC_140318 XLOC_108507 NonCoding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_07086 CCACGTCGATTGCATTCGGGGCAAACGGACAGCAACACTGGAGCGTTTGAATAAAGCCTA Gene GeneID:100139061|LOC100139061:XM_002696459:72_cdna Constitutive 0 NULL GeneID:100139061 20 GENE LOC100139061 NULL hypothetical protein LOC100139061 EMBV3_05687 TAGGAAGATGGAAGAAGCCACTTACCTGGCAGGTGTGTCGAGTTGCCAGAGGGTCACTTT Gene BVV0101_001367 + 0 NULL GK000007.2:4780722-4816267 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40792 ACAGCCCCTTCCTATCACCCCTCTCTGAGGTGATGACTGGGTCCTGCCTCTGTTTAATAA Gene GeneID:540426|MSN:NM_001046477:121_cdna Constitutive 2 NULL GeneID:540426 X GENE MSN MGC137877 moesin EMBV3_06404 ACATAGAGATTGCTGGAAGGTGAACCTGCGAATAGCCCCTCATTTATCTCAGCACTGGAG Gene BVV0101_058820 + 0 NULL GK000029.2:36734987-36807217 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00167403 1 XLOC_102239 NonCoding TCONS_00167403 XLOC_102239 NonCoding NonCoding - 29:36777656-36778104 - TSS125381 448 0.234375 1 0 0 0 0 0 0 0 0 0 0 0.000128578286147977 5.10977204319323e-06 0 0 0 0 0 0 0 0 0 0 0 0 3.74211133382504e-05 0 0 0 0 0 0 0 noncoding CATGGGATTGACAACATATTATCATTTCGACATGCAATCAGTATTTGAGAAATTGAAATATTTCATTTTTTTTACACTAAATCTCAAAATCTGACCTGTAAGTCACACACACGGCACTAGCCACCGGTCCGGACAGCACAGGTCTGAAAGACTGTTAGGAAGAGACTGTGGTTGCAATCAGAGAGCAGCATGTGGGCAGAAAAGTGGGCATTTGGCTCCAGCACTCCAGTGCTGAGATAAATGAGAGGCTATTCGCAGGTTCACCTTCCAGCAATCTCTATGTTTGGAGTTATTAAAGAACTGCACATTATTGTTTTATAATGTGCAATAATGAGTGTTTTATAATTTTATAATGAGTGTTTTCACCACATTTTTAACTGGTCTTGCTATGACTGTAACCTGGGAGGATCTATATAGTCTCTCTCCTCCCTCTTCATTTCTTCAACCC TCONS_00165040 TCONS_00165043 . 3' 3339 TCONS_00165040 TCONS_00165043 . 3' 3786 EMBV3_35959 TTTCCAACAAGTCGGCTCTTCGCATCAGGTGGCCACAGTATTGGAGCTTCAGCATCAGTC Gene BVV0102_274866 - 1 EMBV3_08157 GK000025.2:2362034-2372470 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185534 TCONS_00250013 TCONS_00233570 TCONS_00099001 TCONS_00147668 TCONS_00140829 6 XLOC_111613 XLOC_152956 XLOC_143052 XLOC_059245 XLOC_089555 XLOC_085258 Coding TCONS_00250013 XLOC_152956 NonCoding NonCoding - X:30403877-30408757 - TSS187234 4880 1 TCONS_00250013_8 94 0.384426229508197 1 0 0.00309789697218654 0.00365319750758269 0.00281146784274146 0.00205902044037371 0.00232593713252446 0.000764117406294676 0.00164959537846707 0.00114052186212376 0.00238440577563481 2.10783194328888e-05 7.50552163043802e-06 1.64862353019964e-06 5.4093215011563e-05 3.85573338942106e-06 0.000155832168058986 1.62366019959233e-05 0 6.35557462989221e-06 0.00414214148109091 0.00326805633200268 0.00140610097723149 1.74872245947231e-05 7.51971943225039e-06 3.43539026198962e-06 0.00342041974005229 0.0038018317756466 0.00191655419485179 0 0 2.95684337879241e-05 NM_001192736.1 GLA Bos taurus galactosidase, alpha (GLA), mRNA. 2e-94 352 78.10 0.0776639344262295 NR_046484.1 RNU6-10P Homo sapiens RNA, U6 small nuclear 10, pseudogene (RNU6-10P), small 6e-25 122 85.98 0.0217213114754098 0 noncoding AATATAAAGTTTACTAGTTTATAAAAAACAGTTGGAATAAATAAAATATTTAAAGGCTTTTCCCCATTTTTCCTCAGTCTCAGGAGTTAGAGATGGTCTATAGTAAATGTTCCTGAGAGCAGAGCTAGAGTCCTAGTCTCAAGGCACAGGGAAAGAAAATCAAGTTCTAACAAAATGGTGGCAGGTCTAAACCAAATGGTGGCCAAAGCAAAATGGTCATCAAAAATCACAACACAGAACATAGAGTTAAAACACACACATAGACCTGGCAGTCCTTATCAGACACTCCCTTAAATATAATACAGCCTCTCAGAAAACCTCCTATAGAAACACAGAACATCAGATCCAAGTACTAACAGAGTAATTAAAAATATCTCAGGTCTTCAAAGATTTCAAAGGGAGGAAAGGAAGCTAGGTTTAAAGAAGAAGGGGGAGGAGGGGGAGCAGTTTATGGTGATGGAATTAGTTTCCCGGTTGTCTTTAGCCAATCATTCTGACTCAAGAGTCCTTCCTGGTGGTGAGACATGTGGTATCTCCTTTTGACCTTTCCCAAACTCTTCCGGTTGGTAGAGGCTCATTAGTTCCATGTTCCTTACTAGGACCTCTGGTCATAAAACCACTCATGCTATGGTGCCTGGCCAGGGTGGGTGGTTTCAGTAAGTGTGCTTCCCCTAACATATATACTCTGTTCCTTATCCCCAAAGCTCATGAGTAAGATAAGTCACATCACCTTCCTTAAGGAGAAATAAAAGAATAGGTGAGAAGAGGTTCTTTTACCTTCGAGGTCCAATTCATATATTATCTCTGAACAAAATCTTTCATGGCCCTTCTACTCTGAAATAATTTTTACCCTTCTTGAATCTTCTTTGGGTAGTATATGTGTCTCTCTTAAAGCACAGACCATATTATTTAAGAAGTGATCACTATCATTTATACCTATATTATTTTCATTACTGTTCATCCTTTTATTCAACAATTATATCTAGATCACTCTCAATGTTTCAGGCAATATGCCAAGTGCTGATGAACATTACATAGTTTCTATTCTCCTTGAGCTTAAAAGCTGGTTGGGGAGATGATCAATAATTTCCTTGAGAGATAAATCTACATCTATTCTTTTCTTTGTACCTCTAATATTTGCTCAGTAAAAGTTCATATAATGAATTATAAAATATTAATAAATAGAAATATCAATTAAATAGAGCTGGTAGATGGGAAAGGGGAGCTCTCTGATCCTGTGTTGACAGCAGAGCCCAACACAAAGATTCTTCTTTGCAGGCAAGGACTCAGCCAACGAAAAGCCATGGATTCTGTGTTTACTCTATCCCTCCCAACTTCCTCTTCTCCTTTCCTTGTCATGCAGGAACTTGCACATGGCTCACCATGGTTACAGACTTTGAGTTACAATTCTCTGCTGACCTTAAATAAACTTGTTGGATAGAATAGGAAACAGGAGTCCAGAATAGCAGTGGCTAAAAGATAAGAAAGGGAAAAGCCCACAAAAGTAGAACAAAGGAAGGTCCGAGGATCAGAATGAGGACCTCAGGTAGAAAAAACAGCACTCCTGGCTAACCCAATTTACATAGCGCAGGCCCAGGGGGAGGAAAAAATATATACAAAGAGGAGCCAAAGGCCCAGGGTTCTCTCTCTCTCTCCTGCATGCTGGCACATTCCCCCACTCTCTTCTCTTCGTGTCTTTGGGTCAGCCTGCCCTCACGCCTCAAGGATGGATTTTCCTGCTATTTTCTACATAAAATAGAGCTGTAACATGGAGCTGTAACACTGATCTGTCTAAAAGCTATAACAGTCTGTCCAAGACCCGAGAGCTATAACAGGGTCTGTCCAAGAGCTATGACGTGAGGAGGGCTGTAACATCTGTCGCTTCAAATTTTTGTTGGGACAAGACAGAACCTAGGAGAATACACTCGCCTGACAAATCCATCTTTTCTTCAGAAATACCTGGTATACTACGTGCTTCAGGGGAACAGAATGAATAGTTCAATAAAAAAGTCACTATTTGCCTCAATACTAGGAGTCAAAATAAAAGCAAACATATTAACTCAATTAGAAGTGTCAATTTTTAAATTAATAAGTACTCAAATTATACTTGAAGCCTTTGAAATACTAGTAATTCTGCAGAACATGTTCACATATAAAATATGAAGTGCTAATAAACATAACTAAATATCATTAATATAATGACATTCCAACACAAACAAAGCATTTCATGTAATAATTCCTAGTCAGAACCAGCTGGCACAATCTTACAGATAAAAAGACATCAGCATCCAAACAGATGAGCAAATCATTAAATAAATCACCACATTATTAGCTTGCAGACAAGTCCAACAGTTTGAGCAGGCTCACAATTCATAACTTGCTACAAAGCAAATTTATAAGGTAATTGTTAAAGATCTCATCCAGCAGTGTAAAAATGTAGGGTAGATCTCATGGAATATAAAAATACAATCCAAGCTCATTTATTTCCACAGTAAAGCACAACTTTGACCACTCAGATTTTAGTGTATGTATGATTTACCTAGTACAACTTTTAAAAATTTCCTTTTCTGAACTCTACTCCAAAAGATTTTGGTTGCTTTGGTTTGAGATAAGACCCCAGTATTTGGATTTTATAGGCATGGAAAATTCTTATGCAGGTGGTCACTGGACCACACAGTATTTGTGAAATAATGTTCTAGATTGAGAATCATTTTTCAGCAATTGCTTGCTTTGGCAACACATGTACTAAAAACTGGAACAATACAAAGAAAATTAGCATGGCCCCTGCACAAGGATGACAGGCTAATTCATGAAGCATTCTTTATTTTTAGAAACAGATTCATGGACATAGAGAACAGACTCCTGGTTGCCAAGGAGGAGAGCAGGGATAGGGGAGAGATGGATTGGGAGTTTGGGATTAGCAGATGCAAACTATAATATATACAATGGATAAACAATGAGGTCCATGGAACTATATTCAATATTCTGTGATAAAACATAATGGAAAAGTTATGAAAAAGAATATGTGTGTGTGTGTGTGTGTATACACATATGTATAACTGAATCACTTGGCTGTACAGCAGAAATTAACATAAATCTATTATACTTCAATAAAATAATTTTTTTAAATAATTACTTTCCAGTCATCTAGACAAATTAACTCTCCGATAACTGCTTCTTAATTTACAGATAGAACTCTGTCATATATGGAAATGGAAAGATAATTTTCACTCTACTTTTCTAGGTTCTTGGCTGAGACCTCCCTATAATAAAGAGTCAGATTAACAGGAGAAAAACAGAATTTTAATAACATTTTTCACTCCTGTACACATGGGAAAGACCCAAGAAAACTGATAATTTCTGAAACAGTCCAAGTCATCATCTTAAATACCATTTCCAGCTAGAGACAAAACAAGATGTTGGGGGCTGTGGGAAGGGGGCCCAGTTTTAGGAGATGATCAGAAGAGCACAGTAAACAAGAGTAAAGGCTGTTATGCAGATTTAAGTCCTTGACCTCTGCATTAACAAGAGATTCTAGAAATGTAAAGTCTACTTTCTCTTCCTAGTACAGCAAGGGAGACACCCTTACAAATGGAGATTTTCCTTATAAACGCAAATATCTCTTACAAAAGAATAGCTTCTACTAAGTTTTCAGAGTTTTTCCTATGTCTGCTGTTTCTTAAAAATAATCAGCCTAAAATAATCCTTATGCCAATGAGGCATATTTTGGGGTGATATTTTGGTCCCCTTCACATAAATCTTCTGAGGCAACAGATATGTTAAGATACTGTAAAGGGAGTGCCCCTCAAATGTGACTATATAATGGAACCAAATGGGAATATTTAAAATATACCAATAATTGGATCCCTTAATTTAAAAGTTTGATTTAATTGGTCTGGGATGCATCCTGAGGATTAGAACTTCTAAAAATCTCCTCAGATGATTTTTATGTGAAACTAAGATTAAGAATTTTTAATATACCTGAAGTGCTTCTCAGACATTAATACATATTAAAGACTTTGCTAAACAGACTCTAGTTTTTGTATGACTATTTAATCTGTGTAGAAACTAACCTTCCCACTGATGACATATTAACTACAAAATACTAAAAAAAAAAAAAAAACAAAACCACAGCTTGATCCTGCCTCCCCTTCACATAATTTCTTGATTTTTAAATGTATTATATTAAAATCTTAGAGATTTAAAAGAAATCTGTGGGGTTTTCTTGTGAAATGACTGATATTATTTTTCAAAGTAAAGACATAAAGTAATGAATAAATCATGAAAAAGGCTTAAATTAAGCTAGGTATGAGATGCTCCTTGGTTCATTCCTCTTTCTCAGGTTAACTTTGAAATGAGCCTTTGTTATCCTTATTAGCAAAAATTCCATGGCCACTTGCTCTTTACAATGTAAGGATGGTTATCATATCATTCCAGCCCCAGTATGGTATCCAGGAGACTAAATTTCATACACACACACATATTGATGCAGCAATTGTTGTTCAGTCACTAAGTTGTGTGTGACCCCATGGACTGTAGCATGTCTGCTTCCCCGTCCTTCACCATCTCCCAGAGATTGCTCACACATGTCCACTGATGCCATCCTACCATCCCATCCTCTGTTGTACCCTTATCTTGCCCTCAATCTTTTGCAGCCTAATGGCCTTTTCCAATGAGTCGGCTCTTCACATCAGGTGGCCAAAATATTGGAGCTTCAGCATCAGTCCTTCCAATAAATATTCAGGGTTGATTTCCTTTAGAATTGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTTAAGAATTCAAAAGCATCAATTCTTCAGTGCTCAGCCTTCTTTATGGTCCAGTTCTCACATCCATACATGACTACTGGAAA TCONS_00243982 TCONS_00243983 TCONS_00243985 . 3' 476598 TCONS_00243982 TCONS_00243983 TCONS_00243985 . 3' 481477 EMBV3_16127 TGCTGTCTGGGGTCAGCCACCTAAGGGGTGTACTTTCCATTACCACAAATAATTGAGAGG Gene GeneID:280763|DDO:NM_173908:2_cdna Constitutive 0 NULL GeneID:280763 9 GENE DDO NULL D-aspartate oxidase EMBV3_43257 ACCCCTGGACCACGATGACCAGTGTGGGAAGCAGAAACTGGCCTACAAACTAGAACAAGT Gene GeneID:407104|PLXNA4:XM_002686955:32_cdna Constitutive 0 NULL GeneID:407104 4 GENE PLXNA4 PLEX2 plexin A4 EMBV3_35333 GGATGTGACCCAATTTCTACATCTCCACAACCTTTAGTCATAGACCCCTCAAGCGACCAG Gene BVV0102_173366 + 0 NULL GK000019.2:36616335-36622182 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04022 GTACCCTATATATTCTGTCTACAAGAGACCCACCTCAAACCTAGGGACACATACAGACTG Gene BVV0102_049154 + 0 NULL GK000022.2:145208-190317 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129422 1 XLOC_078135 NonCoding TCONS_00129422 XLOC_078135 NonCoding NonCoding - 22:181885-186835 - TSS96289 4950 2 TCONS_00129422_4 163 0.736363636363636 1 0 0.0002528728030027 0.00022329948618077 9.90831502987539e-05 4.16605678091461e-05 0.000132655512572187 1.87885399955685e-05 8.01124094595849e-05 3.52492958893883e-05 0.000328356313518931 0.00010099191344263 0.000353320673915645 1.08354262867448e-05 2.08675206035257e-05 3.32605456519977e-05 0.000123893961283659 0.00148865634877454 0.000275027873144074 0.00147504328046413 9.41637150907906e-05 0.000114772450740584 6.69031568458577e-07 0.000193387196539124 0.000259468491577269 0.000426736477994729 0.000505289331735574 0.000371773617589867 8.75913201926208e-05 0.000173669887486578 7.64967271832135e-05 0.000403246130809026 XM_003586954.2 PPFIBP2 PREDICTED: Bos taurus PTPRF interacting protein, binding protein 2 (liprin beta 2) (PPFIBP2), mRNA. 3e-85 322 72.63 0.114141414141414 0 noncoding 0 0 0 0 -0.403425541660498 0.0814654984253943 -0.0036424600665156 0.94232323569482 GAAAAAAAGAGAAGACTTAAATTAAATTAGGAATGAAAATGGTGGGGTGGTGGAGACGTTACAACTGATCTAACAGAAATACATAGGTTCATAAGAAATTATTATGAACAATTATAAGCCAAAAAAATTACATAACCTAGAATAAATAGATAAATTTATAGAAACACACAAGTTACCAAGACTGAAGAGACAGAAAATCTGAACAGACCAATAACAAGTAAATAGATTTAATCAATAACCAAAAACCTCCCAACAGAAAACCGCAGAACCAGAAATCTTCAATGACAAATTCTACCAAGCATTCAAAGATTTAAGACCAGTCCTTCTCAAACTTTAAAAAACTGAGGAGGATGGAATATTTCCAAACTTATTCTAGGAAGCCAGAATTACCCTAATAGAGCAAGATAAGGACACAATGAGAAAACTAGACCAATATCTCTGATGAATACAGATGCAAAAATTCTCAACAAAATATTAGCAAACAGAATTCAAAAGCACATAAAAGATTATACACCATGATTAAGTAGGATTTATGAGGAGCTTCAAGATGGCAGAGGAATAGGACAGGGAGACCACCTTCTCCCCCACAAATACATCAAAAGATCATCTCCATGTGTACAATTCCCACAGAACAACTTCTAAACACTGTCAGAGGACCCCAGACTTACAGAAAGGCAAACCAATCTCCTCGGAATGAGGTAGGGCAAAAGAAGACGAGAAGGGAGACAAAGGATTTTGGGATGAGACGAGAAGAAGACCAAAGATTTTGGTACAGGGGACCCATCCTAAGGAGGGAGTCATGAAGGAGGATATATTTCCACACAATAGGAAATCCTCTCACAGGTGGGGTCAGGGATGAGTTTAGGAATGTCAGAGGGAAGCACAATGAGGTAAAATGGAGAAAATTCACCACAAAGACTGCACCAAAATGCAACTTCCAGCCAAGCAGCAGCTCCCACACTTGTGTCCAGCAGCAGTGAATGGGGGCTGGGTGCAGAAGCGCAGGCTGTGTGGGTCGGTCCTAAGGAAAAGGACTGAGGTTGAATGCCATGAAGACATGCTGAGGAGGCTAATGTGACACAGCATAGCCAGGACAGAGAAAACCCTGGAACCACCAGAAAAATAAAAGATCATTCCCACAGGAAGGCTCTAATGCCGCACTCTAACTCAGTGCACTCACAGAACAAAGGACTGCACCCTAGCAAATACCGAAGTGGGGTGGGCTAGCTGTAGTCTACAGCTCCAGAGGAAGACAGGCAGGCGCGTGACTGCCAGAATCAGAAGGCAAGGGCCTGCTGCTGCCAAGCTGTGAGCAGCCGCCAGTTGCCACCCACTTCCTCCTGTGATCCTTGGCGGCTCGTATCCGCCAGCAGCCTAGGGAAGCGCACAACCCACCTGGGACTGTGACCTCATGGACTAGCCAGGAGCCCAAGCGGCTTGGCCAAGGGTCCCACAGACTGAGACCGACTCTCCTGGGAGGTGCATGCCCACCTACGGCAGTGGCAACCTCCCATGTGGTCCAGCCATAGCAACTGCACCCCATACACGCAGCAGCGTTTACAGTGTCCCTCCCTCTCCACAGCATAACTGAGCAAGTGAGCCCAAATAAGTGGCCCCTTTCACCCCCTCATGTCAAGGGGTAGGTAAGACATTGAAGAGAGACTTGCAAGCAGAGGCAGGCCAAAAAACAAAGCAGAAGTGTGAGCAAAGCAAAGGGGGAATCGCACCAGAAGTGGCAAGTGTAACAGATTAAAATCCTACAGTTAACTTCAGACTGTGTGCTTTAGGCAAAACTGTAGGCTTTCAGAGCAAGTAAAAACCTGAACAATGGAAGATCTTGAGACTGAACTGATTCCACACTGCACAGAAGTCCAGAGACCTTCCAAGATATATTGGAGAACCTTCTGAGTAGGCAAAGCGACTGGAGCAGAAAAAGGGAGGAATCACACAAACATTTCTCTCACTACCACCATATACATACTATCTACCTCCTATAAATTTATTATTTTTAGATTTTTTATTCTTTTAACTCCCCTTTCCCCCCTTATAGTGTCCTAATACAGTTCTTTATTACTGCTTTTTTATTTTTATAGCCTTTTACCTTTCTTAAAAAAAAAAAAACTTATTTTTAAAATAAATTCCATACTTTAGTGTTTGATTTTTTTTTTTTACATTGGACTTTTGAAGGACTAATTTTTATACTAGGTTTTTAATTTTTGCTTTATGATCTTTTGTTAACTATTTTTTTTTCCTTTGTTAATTTTAATCTTTGAGAATGTAAGTTTCCATTTTCACTTAAGAATTTGATTGTTGGCTTGGTTGCTCTCTTCTGACTTTCCCTTTTCTCCTTTTCATCTTCTTCTGTTCTCTACATAGCTCTGTGAATCTCTTTGGGTGTTACTGGCTGTTGAGAGTTGTTTCACCATTAACCTATGGGTTTTGTCTCCTGTGCTATGTGGCCTGAGAAGTTTTGGTCCTCCTGTAAGAGGTCAGAACTAAATCCAAGGCAAGAGACTCAACTCCAGGACTTTGGAACATCAGAGAACTCCCAAACCCATGGAACAGTAATAGACGAGATCCCGCCCAAAAAGTTCCATAACTACACGGAGACCAAGCTCCACCCAAGAGCCAGCAAGCTCCAGTGCAGGACACCACATGCCAATCCTCCAGCAAGAACACAACCCTGCACATTAACAGACAGGAGGCCCAAAACCACATCAAACCCACAGACACTCCCAAACTCACTACTGCACACTGCACTGCCCTCCAGAAAGATGAGATGGAGCGCCATCCACCAGAACACAGGCACAAATCCCCCCAACCAGGAAACCTTCACAAGGCACTGGTGCAACCACACCCACAGGGAGCAGACTCCACAACTAAGAGGAACCATGCCTCTGCAACCTTCAGAAAGGAGACCCTAAGTATAGCAAACTAAACAAAATGATAAAACAGAGAAATATCTAGCAGGTGAAGGAACATGGTAAAAACCCATCAAACAAAGAGGAGATAGGGAATCTATCTGAAAAAGAATTCAGAATGATAGTAAAGATGATCCAAAATCTTGAAAAGAAAACAGAGACACTGGAGGAACAGATTGAGAAGAGGTAAGAAATGTTTAATAAGGATCTAGAAGAAATACAGAATAGTCAATCAGCAACGAACAACACAATAACTGAGATTAAAAACACTCTGGAGGGAACCAACAGTACAGTAACTGAGGCAGTTACAGATAAGTGAGCTGGAAGATAGAATGGTGGAAATAACTGAAGCAGAGCAGAAAAAAAGAAAAAAGAATAAAAAGAAATGAGGGCAGCCTTAGAGACCTATGGGACAATACTAAGCACCCCAACATTAGAATCATAGGTGTTCCAAGAGAAGACGACAAAAGTAAAGGGCATGAGAAAAATTTGAGGAGTTAATAGTTGAAAACTTTCCTAAAATGGGGAAGGAAATAGCCACCAAGTCCAGGAAGCCCAGAGAGTCCCACAGAGCATAAACTGAAGGAGAAACATGCTAAGAGATATACTAATCAAACTAACAAAAATTATTCACAAAGAAAAAATCTTAAAAGCAGCAAGGGAAAAGCAAAAAATTACATACAAGGAAATTCTTATAAGGCTAAAAGCTGATCTTTCAACAGAAACTCTGCAGGCCAGAAGGGAATGGCAGGATATACTTAAAGTGATGAAAGGGAAAAACCTACAACCAAGAATACTCTATCGAGCAAGGATCTCATTCAGATACAAAGGAGAAATAAAAAGCTTCAGATAAGCAAAAGCTAAGAGAATTCGGCACCACCAAACCAGCTCTTCAACAAATGCTAAAGGAATGTCTCTAGACAGGAAATACAAAACAGGATTATAAAAACAAACACAAAACAATAAAGTAAATGGTAACAGGAACATATTTATCAAGAATTACCTTAAACATAAATGGGTTAAACGATCCAACCAAAGACACAGACTAACTGAATGGATACAAAACAAGTACCCTATATATTCTGTCTACAAGAGACCCACCTCAAACCTAGGGACACATACAGACTGAAAGTGGGGAGTGAAAAAAGATATTCCATGCAAAGTGAAGGTGAAAGTGAAGCCACTCAGTCACATCTGACTCTTTGCGACCCCATGGACTATAGCCTACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCTTTCTCCAGGGGATCTTCCCAACCCAGGGATCGAACCCTGGTCTCCTGCATTGTAGGCAGACGTTTTTACCATCTGAGCCACCAGGGAAGTCACTATTCCATGCAAATTGAGACCAAAAGAAAATACAAGTAGCAATGCTTATATCAGGTAAAATAGACTTTAAAATAAAGATGGTTATAAGAGACAAAGAAGGACACTACATAATGATCAAGGGATCGATCCAAGACATAATTATTACCATAGTTGCTCAGTCATGTCTGACTCTTTGCGACCCCATGGACTGTAGCCTACCAGGCTCCTCCTTCCATGGGATTCTCCAGGCAAGAGTATTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATGGAACCCAGGTCTCCCGCATTCCAGGCAGACACTTTACCTTCTGAGCCACCAGGGAAGCCCAATTATTAACACACATGAACCCAACAAAGGAGCACCTCAAGATGTATAAGGCAAGTGGAAATAACTATTAAAGAGGAAATCGACAGCAACACAGTAATAGTGGGGGACTTTAATCCATCCACTCATGGATGGATAGATCATCCTGACAGATAATTAACAGGAAACACAAGCTTTAAACAATACATTGGACCAGGTGGACCTAATTAATATCTTCAGTACATCTGATCCAAAAACAATCAGTTCAGTTCAGTCACTCCGTCGTGTCTGACTCTTTGCAACCCCATGAACCACAGCATGCCAG TCONS_00127733 . 3' 3483 TCONS_00127733 . 3' 8432 EMBV3_06137 CGTACGTAATGGTGGAAGAGTTCAGCTTGTGGCAAGACTTGTAAGCAGAGAAGACACGGA Gene GeneID:781474|LRRIQ1:XM_002687193:93_cdna Constitutive 0 NULL GeneID:781474 5 GENE LRRIQ1 NULL leucine-rich repeats and IQ motif containing 1 EMBV3_10587 CGCTATCTGTCCCCGACCCGGAGGAGGTTTGGTAAAGATGCTGCCTCCAAACTGTTGGAA Gene GeneID:100299475|LOC100299475:XM_002695197:886_cdna Constitutive 0 NULL GeneID:100299475 18 GENE LOC100299475 NULL hypothetical protein LOC100299475 EMBV3_28546 GCAGATGCAAACTAGCCTATATAAGATGGATAAACAGGGTCCCACTGTATGGCACAGGGA Gene BVV0102_174925 - 0 NULL GK000022.2:5832311-6083378 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10146 AAAGTTGATAGAAACTGGAGAAAGAGAACGCCCTGGTACCTGACAGTGTAAAGAAGGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11456 TTCCATGGATCCCGCTTCTCAGACTGGAGATTGGGAGTGGGGGCATAGGGGACCCTATTG Gene BVV0102_221992 + 0 NULL GK000026.2:38021121-38163824 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10848 TTCTCCCCAGAGGAACTCAAGGTCAAGGTGCTGGGAGATGTGATTGAGGTGCATGGCAAA Gene GeneID:281719|CRYAB:NM_174290:23_cdna Constitutive 0 NULL GeneID:281719 15 GENE CRYAB NULL crystallin, alpha B EMBV3_07793 CCTTGGCTTTTATTCGTTGGGCCTCTCCTTCGCAGCCCTGTAAGGGTGAAATGGGTTGTA Gene GeneID:407155|EGR4:NM_001040497:62_cdna Constitutive 0 NULL GeneID:407155 11 GENE EGR4 NULL early growth response 4 EMBV3_12210 GCAGTCTCTGTGAGATTACCAGACAAGGTTTTGGGCTGGAGGCTGTGTTCTCCATCATGA Gene GeneID:534582|NFE2L1:NM_001102515:144_cdna UTR3_Alt 2 NULL GeneID:534582 19 GENE NFE2L1 MGC143343 NRF1 nuclear factor (erythroid-derived 2)-like 1 EMBV3_35557 AGAAGTCCAGTGGTTAGGACTCCAGGTTTTCACTGCCACTGTCTGGGTTCAAGTCCCTGT Gene BVV0101_029210 + 0 NULL GK000005.2:101731031-101751130 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13545 TACATGGGCCTCCAGTTCTAACCAAACTCCAGACTTGGACAGTCTTTTGGAGGAAGCCTG Gene GeneID:509832|GDI2:NM_001033762:29_cdna Constitutive 1 NULL GeneID:509832 13 GENE GDI2 NULL GDP dissociation inhibitor 2 EMBV3_12530 TCACTTTACCAACAGTGGACAGCTTTATTCCCAGGCCCAGAAGAACTACCCATACAGCCC Gene GeneID:614152|BRE:NM_001102274:216_cdna Constitutive 3 NULL GeneID:614152 11 GENE BRE MGC165890 brain and reproductive organ-expressed (TNFRSF1A modulator) EMBV3_22706 TAGGAAGGATTTGGTCTGTGGAAACAGGGAGGGCCAGCAACCTGTCCCAGCACAAAAGAA Gene BVT0102_055185 + 0 NULL GK000002.2:36133094-36256324 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102188 TCONS_00102190 TCONS_00102185 TCONS_00102194 TCONS_00102189 TCONS_00102195 TCONS_00102180 TCONS_00102184 TCONS_00102186 TCONS_00102197 TCONS_00102196 TCONS_00102181 TCONS_00102192 TCONS_00102187 TCONS_00102191 TCONS_00102193 1 XLOC_061826 Coding TCONS_00102191 XLOC_061826 Coding Coding RBMS1 2:36043028-36181154 j TSS76167 3908 1 TCONS_00102191_4 401 14 0.97180814479638 2.31883549879857e-08 5.02912031631734e-07 0.000988675895668514 1.28047036200131e-16 0.000289997605421158 0.000128289642387713 0.000803778410154834 0.00061852607585344 0.0016392843899712 0.000212037875023681 0.000146642182087003 0.000207291504695232 2.15729794923874e-10 0.000550031117431682 0.000443445683409406 0.00417631654955346 0.00711149038644654 2.20038055216214e-05 0.000135467736476746 1.78153330359966e-08 0.000292272050201142 0.0027521370279828 0.000997933047681849 0.00492022573796734 0.000678883240292649 0.00167369194619452 6.06294415859755e-13 8.5883393573584e-07 6.99418847642042e-07 0.000446573819114875 XM_005202438.1 RBMS1 PREDICTED: Bos taurus RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant X3, mRNA. 0.0 3510 97.11 0.515864892528147 XM_005246739.1 RBMS1 PREDICTED: Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant X3, mRNA. 0.0 5853 92.65 0.988741044012282 TCONS_00102191_4 sp|Q3ZBP3|RBMS1_BOVIN RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1; 0.0 780 99.21 0.947630922693267 3 coding 0 0 0 1 -0.127595802660877 0.315972729315052 0.0222066271574365 0.62919906972351 AGGCTGCCCCGCGCCCGCCGCCCGCGCCCGCCGCGATGATCTTCCCCAGCAGCAGCGGCAACCCCGGGGGCAGCAGCAGCTGCAGGACGCCCTATCGCAAGCAGCAGTCTCTGGTCCCAGCCCATCCTATGGCCCCTCCCAGCCCCAGCACCACCAGCAGTAATAACAACAGCAGTAGCAGTAGCAACTCAGGATGGGATCAGCTGAGCAAAACGAACCTCTATATCCGGGGACTGCCTCCCAACACCACAGACCAGGACCTGGTGAAGCTGTGTCAGCCATATGGGAAGATTGTTTCCACAAAGGCAATTTTGGATAAGACAACAAACAAATGCAAAGGTTATGGTTTTGTTGACTTTGACAGTCCTGCAGCAGCTCAGAAGGCTGTGTCTGCCCTGAAGGCAAGTGGGGTTCAAGCTCAAATGGCAAAGCAACAGGAACAAGATCCTACCAACTTGTATATTTCTAATTTGCCACTGTCCATGGATGAGCAAGAACTTGAAAATATGCTGAAACCATTTGGACAAGTGATTTCTACAAGGATACTACGCGATTCCAGTGGGACAAGTCGTGGTGTTGGCTTTGCTAGGATGGAATCAACAGAAAAGTGTGAAGCTGTTATTGGTCATTTTAATGGAAAATTCATTAAGACACCACCCGGAGTTTCTGCTCCTACAGAACCGTTATTGTGTAAATTTGCGGATGGCGGACAGAAGAAGAGACAGAACCCAAACAAATACATCCCAAATGGACGGCCCTGGCACAGAGAAGGAGAGGCTGGAATGACACTTACTTATGACCCAACCACAGCTGCTATACAGAATGGATTTTATCCTTCACCATACAGTATTGCTACAAACCGAATGATTACTCAAACTTCTATTACACCCTATATTGCGTCTCCTGTATCTGCCTACCAGGTGCAAAGTCCTTCCTGGATGCAACCTCAACCATATATCCTACAGCACCCTGGTGCTGTGTTAACTCCCTCCATGGAGCACACCATGTCACTACAGCCTGCGTCTATGATCAGCCCTCTGGCCCAGCAAATGAGTCATCTGTCACTTGGCAGCACCGGAACATACATGCCTGCCACGTCAGCTATGCAAGGGGCCTACTTGCCACAGTACACACACGTGCAGACGGCGGCAGTTCCTGTGGAGGAGGCGAGTGGTCAGCAGCAGGTGACTGTGGAGACTTCTAATGACCATTCTCCATATACCTTTCAACCCAATAAGTAACTGTGAGATGTACAGAAGGGTGTTCTTACATGAAGAAGGTTGTGAAGGCTGAACAATCATGGATTTTTCTGATCAATTGTGCTTTAGGAAATTATTGACAGTTTTGCACAGGTTCTTGAAAACGTTATTTATAATGAAATCAACTAAAACTATTTTTGCTATAAGTTCTATAAGGTGCATAAAACCCTTAAATTCATCTAGTAGCTGTTCCCCTGAACAGGTTTATTTTAGTAAAAAACAAAAAACAAAAAAATAAGCAAAAAAAAAAAAAAAAAAAGATTTTTATCAAATGTTATGATGCAAAAAAAAGAAAAAAAAAAGAAAAAAGGGAAAAAAAAAAAAGAAAACTTCAATTCTCTGGGTGTGCACAAAGACCATGAAGACTTACTCAAGTGCATGACCGGATTCTTGTGGTTTTGTTCATTTTGTGTTTCGTTGTGTTTTTCCCGCTGTATGAAATGGGCTTTCTGACGTTTAAATAGTCCGACTTCACCCCTGGTGTTCTGTGCTTGCAGTGAGAGTGTGACCGCCAGTGTCTCTCTTCTTAGCTTTTTCCGTTTTCCTTTCCACGTCGTGTGAAGTGTCTTATCCTTTTCTATGAATTCCAATTTGCCTTAACTCTTTTGATGCTGTAGCTGTTTCAGTAAAAGTTAGTTCAAACTAATGATGTAGAATGCTTTGACCAAATGGGCTGGTCTATTATGCCTTGTAAAACAGCAGCATAGGGCTTTTAAAAGGTAGTCAATAAAAGTTGCTGAAATTTTGGCTTTTTTAAATATGTAGTAGGTGTTTTTAATGATTTTTCACATAATGTGTAAGGTAGTGAAATGCAAGAAGGGAAAACTGTTTTGTGTGAAACACATTTTCTGACTGGGGAACTTTTAATAGGGTGAATTGTTTGTAAGGCTGTACGCCAACAGTTTCCTCTGATAGTTTGACTGATTTAGGATATCTGCTGTATGATGCAATGTAAAGTCTTTTTTGCCTTTTTTCAGGAAAAAAAAAAAACTAACTTGATGTTCTAGATTTAGTGTAGGTAGCGTTGGGGCAGGGGGTGGGGGGTGGGGGAGGGGAGTCACCGAATGTTTTGTCCTTCCTTTATACTAATGATAGTGCTTTAGAATGAGAATGACGCCTGAGATCTGGCAAACCGAGAAAAAAAAATGTTGCTATTGCAACTAAATGGCAAAAGCTAAAAGTAAGGATTTATCTTCAAACATAAAGCTGAGATATGAATAGAAGCAAAATGATTGGCTACTAGCTCTCTCTATTATGTAAATTTGAGAAATAAAAATTACTTGGCACTTTTAAAGGTAACTTCACCAAAGACCGAAGAGCCAGTAACCAGTAGCTCCAACTAGTCTCAGCATCACATCTTCTGTGCTCTTTATTTTTGCCGGACCAGTTTGCGGTTAGGAGAATGTGCCTTTTTTGTACCTTTGCATTTAGGTTTTCTAATTTTAATTGATGTATGGACACACACACAAAAAAAAGCATGAAGGAGGATTTGGATCCAAGCAGTGCCACACTTTACATCATCACTACAAGTGTTCAGTGTAAAGAAAACCCAATTTTGAAACTATGAAATTCCTGATTCATAAATACACAGTTATTTCTACTTTAGTACCTAGAAGATAATTCACTGTTATTAAAGCTCTTTTATTAAGACAATTGCATATGTTTGAAAAGCAATGGTAAATTAAGTTGTCTTCCAAAACTGTGTACTTGTCTGGTCAACTGTGTGTGATCAGTTATCTACCTCAGAGTCTATTTTCTTTTGTGCTGGGACAGGTTGCTGGCCCTCCCTGTTTCCACAGACCAAATCCTTCCTAGCTCAGGAGCTAGGCCTAAGCAGTTATTTCTTTCGAGTATTTTTTAGTTCTTAAAATTTATGCTTGTATTTGATTATAGATGTCAGTGACATTTCATAGTTTCAAAAGTCCTTGCTGCTCTGAGAAGTGTAGATTCTAGTGAAAATTACATAGTCATAAGAGAAATGTGTTTTTGTTTTTGTTTTTGTTTCCTTTTTTTAAAGTTGTGGTATTATTGGTTCTATGCTCCCTGGAATATTACTGCTTTGTGAAAGTCCAGACTGAACGCAGCGCCCTCTTTGTACCTAGTACGTTATAAACCTGGGTCTCTCACTACTTGATATTTTTGCATTAGTTAAGACAGAAATTTGATAGCTCAGTTAGAGAGGAGGGAAAATCTGCTGCTAGAAATGTCTGAACTAAGTGCCATACTTGTCTGGGTAAGATTTGGGAAACATAACCTCTGTACATAAAAAAAGAAAAAAAAAATCAGTTAAACATCACATAGTAGACAGCCATTAAATTATAAAAAAATTAATTTATGAAGAAAGACCTTTTGTACAGATTGAAAAAAAAAAGATTTTCATAGAGATATCTATATGATCAAGAGAGTTAATTTTTTATTTTTGTTTTACTAGTGCCACAAACTTGCCAGTGGTAACTTATTTGTCCGGTTCAAGATAACTCTGTAGTTTTCTTTCCTAGGACTTGTTGTTAAACGCCAAAAGACATTTTTGAACTGTACATTTGATCAGATTGTTAGCTTTTTTCTGTTTTATTTCTTTTGAAAACCTTTGAATAAAAAACATCTGAAATTTTATTTTTTCCTGTCAGTTTCTTTTTAGGTTAAATGTGT EMBV3_41138 GGCCATATGTAACCCCTTGCGTTATGTCACCATCATGAGCAAAAGGGTCTGTGTCCAGCT Gene GeneID:785877|LOC785877:XM_002690450:320_cdna Constitutive 0 NULL GeneID:785877 10 GENE LOC785877 NULL similar to olfactory receptor C6 EMBV3_05500 CTCATAAGGCCTAGGAGTGCGTCCGTGATCTTTCCTGTTCTGCCCTCAATCTCGATATGA Gene BVV0102_352370 + 1 EMBV3_34685 GK000030.2:93096382-93117837 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245158 TCONS_00245149 TCONS_00245157 TCONS_00245156 TCONS_00245159 1 XLOC_150636 Coding TCONS_00245156 XLOC_150636 Coding Coding LOC100301478 X:93113430-93150673 j TSS184085 3327 1 TCONS_00245156_4 1054 9 0.910907040438215 0.053832815567265 0.0600339776948347 0.0404908238994986 0.0292151447034029 0.0360330624205975 0.0131523236047707 0.0181392957180308 0.0246504908788565 0.0380231710343836 0.00438740571854356 0.000220770979283271 0.00114667439139962 0.00459299986841296 0.0151146675175339 0.01051523969872 0.00397651185422918 7.68288189088253e-08 0.000579754581727371 0.0365280137181091 0.0471586029642717 0.0146640099035805 0.00103732195126611 0.00220280152161795 0.00184694734857141 0.0588640102768134 0.0430158863086224 0.0334808692402969 0.000516644033933889 1.95681960062628e-27 1.17372566170819e-23 XM_003584903.2 CCNB3 PREDICTED: Bos taurus cyclin B3 (CCNB3), partial mRNA. 0.0 3997 99.78 0.669972948602344 NM_033031.2 CCNB3 Homo sapiens cyclin B3 (CCNB3), transcript variant 3, mRNA. 0.0 713 76.30 0.281334535617674 TCONS_00245156_4 sp|Q8WWL7|CCNB3_HUMAN CCNB3_HUMAN G2/mitotic-specific cyclin-B3; 0.0 606 40.33 0.995256166982922 1 coding 1 1 1 1 -0.136405057837958 0.426221307525024 0.0270350877570422 0.615937582310513 CTAAATTGAGACGGACGCCGGTTGCTGCAACGCGGAGCTCCGGTCATTTCCCTGGCCTCATAAGGCCTAGGAGTGCGTCCGTGATCTTTCCTGTTCTGCCCTCAATCTCGATATGAGCCCTGCCTTGGATAGACGCTGCTGAATCTGTAAGAAATGCCGCTGCCACTACCATCCCACCACTCCAAACATGAGACTAGGAAATCTCAGTCCAGCATTGTGCCCAGTGATCGTGAACCATCTGAAAAGAAAGATGAGAAGTACCAAGCAAAGATATCTCCATCTTCACCTCAGGGACCACTCAAAAAGAGATCAGCTTTTGAAGATCTCACCAATGCTCCTCAAAGTCAACCTGTCCAGCCCAAGAAGGAAGCCAATAATGAGTTTGTTAAAGATACTTCCAAGAAGAGAAACAGGAACACATCTGCTAATAGGTTGCCTGAAAACAATAAGATGAATATAAAAAGATGTAAGGTAGAACTCTCACCAATAGTAGTGTCAACCACCATGATGCCAAATATTATAGATAATCTGCTCACTCTGGGTATGTCTACCAGCTCCAAGACACCCAATACTGAGGAAGCATCTCTTTTCAAAGAGCCATTCATTTTAAAAGAGGAACCCACTTCTGAGGATGCAGTCCTCATGAAGAGGTCATTATCTTCAAAGAAGTGCACAGATCAGGGGGTAGTGTCCCTCTTGCAGAAGCCACTGTCCTTGCAGGGGAAGAGTGACAGTGATGTTGTACAGCCAATGATTTTTGGGAAGAAGTGTAAAACCGAGGAGACAGCCATCACCAACAGGACATTATCCTTAAAGAATATGTGCCCATATCAGGGAAAGCAGTCCTGCTCAGGGGAGGAGTTGGCCTTGCACGATGTCAGTGTTGAAGAGGATTCTTCCTTTATGGAGCTCCAGAATGTTAGGAAGAAGCCTAAAACTGAGGAAGCAACCTTCACCAACCCATTATCATCTTTAAACAAAAAGTATACCACTCAGAGGAAGATGTCCTGTAGCAAAAATCCTCTAGTACTGCAGAAGACCACCTCTGAAGAAAAGCCACCACTTTTTAAGGAACCATTGGCTTTTAAGAAGCAATCTACCACTGAGGAGACAACCTTCACCATGAGGCCATTACCTTTAAATAAAAAGTGTACTACTCAGAGGAAGAGGAAGATGACCTACTCAAAGATGACCACCTCTGGAGAGAATGCATTCATTAGCCAGTTGCTGTCCTTTAAAAAGAAGCCGACCCCTAAGGAGGAGTCCCTCTTCCAGGACCTCTCAGTGTTGCAAGAGAAGCATACTGATGATGGAGCAGTGACACTTGTGAAGAAGCCATGGGCATTGCAGAAGAAAGATGATGAAGATGATTTTCTTATGGAGCCACTTTCCTTTAGGAAGACTCATACTACTAAGGAGGCAACACTTCCCAAGAAGCCACTACTTTTAAAGAGGAAGTGTACTACTCAGGAGAAGATGTACCACTTGAAGAAGCCACTAGTATTGCAGAAGGTCACATCTGAAGAGAAGTCACTCGTTAAGGAGCCATTACCCTTTAAGAAGCCGCCTACCACTAAGGAATCCCTTTTCCAAGAGCCATCAGCATTGCAGGGTAAGCACACCATTCTAGAGGAGGCATCCATCTTGAAGAAGCCCTTGGTCTTGCAAAAGATTCCAACTGAGGAGGAATCACTTAAAAAGGAGACTTTGATTTTTAAGAAGTTTACCACTGGGGAGGCAACCTCCACCAATATGCTGTTATCTTTAAAGAATAAGTGTACCACTCAGGCTAAGTCCTGTTTGACCAAGCCACTAGTATTGCAGACCATTTCTGAAGAGAAATCACTCATTAAGGAGCCTACCACTGAGGTGGAGTCCCTCTTGAAGGAACCATCTGCACTGCAAGAGAAGCACACCACTCAGGGGGATGTGGCCCCCTTGAAAAAGCCATGGGCATTACAGGAGAGAATAGACAGTAAAGATGAATTTCTTATGGAGCCACTATCATTTAGGAAGACACATACCACAAATGTGGCAGTCTCTACCAAGGAGTCATCATCTTTAATGAAGCAAACGTGTGCCACTCAAACACTAATGTCTATCTGGCAAGAACTGTTGGGGTTGCAGAATATGATTGGTGAAGGTAAGAATTCCTTTATGATGCCAGTATCATCTAGGAAGAAGTCTTCAACTGATGAGGCAGTTCTTACCAAGACACCATTATCTCCAAAAATGAGGCAAATCACTCAGTGGAACACCGTCATAGAGAAGACCACCTCTGAAGAGGAGTCACTCTTTAAGAAGTTATTTCCCTTAAAAAAAACGTCTACAACTGAAGAGGAGCTCCTCTTCCAGGGTCCATCTGTATTGAAAGAGAAACACACCTCTCTGCAACAGGCATCCCTCTCAAAGAAGCCATTGACCTTACAGGAGAATATCGCCACTCAAGAAGAATCATATATCAAAGAACTGTTGACCACGGAGAAGTCCTTAGTCTTGCAGAAGACCGATACCAAAGTGGACTTCTCGACGTCATTGGCTTTGCAGAAGAAAAGCACCACTGAAGAGAAATTCTTTTTCGAGAAACCATTGGTTCTGAAGGAAAAGCTCTCCCCCAAGGCAGCAGCCAGCATAGAGGGACAATCATCTTTTAAGAAGCAGCCCACTGCTCAGGGGGAGGTGTTCCTCTTGAAAAAGCAGTCGACCTTGCAAGAGAACATCACCAGTGAAGAGGAGTGCATTATTAAGCAGCCACAGGCCTTGCAGGAGAAGTCCAGCGTTGAAAAGGAGACGATCCTGAGGGAGTCCTTGGCCTTGCAGGAGAATTCCACGATTGAGAAGGACGCTGTCTGGAAGGAGCCATTGGCCTTGCAAAAGACTCTCGCTCACAAAGAAAACACCTTTCTCAAACATTGCACCCTGCAAATTGAAACCAGCCCAGATGTGTCCACCACCATCCCTGAATCTGGAACAGGCTTGTCCAACACCATCACCATGTCTTCCAGTATCATAAGCAAGTCCAGTACTTGTGAATCCAATTCCGATAAACCTTTCTCATCTTCCGACAAAAAATCACAGCAAGAGGTGATCCCACTGGGGAATACTGACATAGACTGCAGTGACCCATTTTTCAGCTCAGTATATGCTAAGGATATTTTCAGTTACATGAAGAAAAGAGAGGAAAAGTTTGTACTTAATAAATATATGACCAGGCAGACTGATATCGACAGTGACATGAGGGCCATTCTTGTGGACTGGTTGGTGGAGGTGCAGATATGGAAAAGAGTTGTTTTTGAAGAATTGGAAGGATATGCCTGACAAAGGCAG EMBV3_08961 CAGATCAGTACCCCCCTGGGCTAGTAGTATGATCAGGAAAGGGTTAATGAGAGCCAAGAG Gene GeneID:534891|TMEM63B:NM_001163939:314_cdna Constitutive 0 NULL GeneID:534891 23 GENE TMEM63B NULL transmembrane protein 63B EMBV3_34069 TTGAGCAAAAGTCAATTTGAATCAGGCATCATCCAATCTTGCGGACAGAAGGGAACTCTG Gene BVV0101_004036 + 0 NULL GK000017.2:35469801-35618114 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14448 TGGAAAAGAGACCAATGGGTGTGACCCGCTCAGCCAGACACCCTGCCTGCAGCTGAATCA Gene BVV0102_341516 - 1 EMBV3_01868 GK000010.2:18992645-18999003 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019713 1 XLOC_010392 NonCoding TCONS_00019713 XLOC_010392 NonCoding NonCoding - 10:18993413-18995075 - TSS13603 1662 2 TCONS_00019713_1 74 0.142599277978339 1 0 0 0 0 0 0 0 0 0 4.74737744333501e-06 4.95125305611059e-06 4.13208878748364e-06 0 1.72640223683917e-05 0 0 0.000190697566567391 0 1.50968333525102e-05 0 0 0 0 2.7599487080943e-05 0.000302610811025707 0 0 0 0 0.000324224546202638 1.08524330579542e-05 XR_138623.2 LOC100847509 PREDICTED: Bos taurus uncharacterized LOC100847509 (LOC100847509), 4e-47 194 84.32 0.110709987966306 0 noncoding 0 0 0 0 0.0271224070605119 0.854747769902033 0.00859358643745808 0.870610111165266 GCATTTTCTGATTTCCTAGTGATCACAGCAGTTACCGACGAAGCAACTGTTAACTCTTGCCTTCTTTCAGGCAAATTTTGAGAGCAGATACAATGTTAAAAATCGTGAATACTATTAGGTTCTTTCCTTTTCCTGGAAAAGAGACCAATGGGTGTGACCCGCTCAGCCAGACACCCTGCCTGCAGCTGAATCACAGGCCTTCATTATGCTTTCCTGTTAGCTCAGATAAGCTGACAAAAAGTAACAACATTAAGATAAAATATTTTAATCTCTTCTATAAGCTGTTTCTGGTTCCCTCAGTTGCAGAGAGGGAATGAATGCTGCGTTATTGAGGTGGTAAGAGCTCATGAAGTTGCTGAGAGGGAAAAAAAAATCATGCTTTACCAGAGGGAATCAGATTCTTCTCTATCCAGAGAAAGAGGGTGGCTTAAGTGGCCATATTGGCCCATCAGCTAAAGATGAACAAAGTACAGGGTTGAACAACACTAAAGGGGCAATGTTGTGGCCAGTGCTGGACTATGTTGCATTTTAAAGATCTATATCTAGATATAGTCCTGTGATTGAAAAGCACATGTATTAAACTGGAGAGCTGATGGCAAACTATTGCACTTCGGTTACAGATTTTGGTCTTCCAACTGTTATAAAAATGCTGTCCATTAATAACCAACAAGGACCTACTGTATAGCACATGGAACTCTGCCCAATATTATGTGGCAGCCTGGATGGGAGGGAAGTTTGGGAGGGAATGAACAGATGTATATGTATGGCTGAGTCCCTTTGCTGTTCACCTAAAACTATCACAGCACTGTTAACTGGCTGTACCCCAATCCAAAATTAAAACTCTAATAGTTAAAAAATATATGTTAATGAAACTTTCACAGGAACCAACAGGTTATATTTTTGCTCATATTAGATGCATAGTGAAAATCTGTCAGTTTAAGGTGATTGTCATTACTGTGCTGAGAAGCAGCTTAGTATAGAAGCAAGCATGGGTTCCATCACATTTAGTTCCAATTCCACTCACTAGCCCTATAATCATATCTGTAATTTAGTGTAAGTCCAGTTCCTTAAAAGTAAACTGCAGACAATTCTAGCTCCATCTGGTGGGGTTTGATAGTTGATGTATGTGAACTATCAAAGTATAGCACAGGGCTCAACAGGCGTCCTCTTTGAGAACTCACTAGTTCTGGAGGTTTTTCCTTGTGACTAGTGCCAGAACATCTGTCTCAATCCAATTAACTAGGTTTGCCCTTCTCTGAGCCATCCTCCTGAAATGAACCTTTATTCCTCTGACCCAGCAACAAGTGACCCCAGAGCTACAGGAAACTGGGGAGGCTGAGGGGGGATACAGACCACCCCCTTAAGTTAGGCTCTGCTTCCTGCCGTTCCACTGTGCCCACGGGCTAGCAGGACAGGAGGAGGTGCTGCTAGGTTCACTGGACTGAGGTGTGAGTGAGGGTGTTGACTGCTGTTTGTTACCTGTTTGGATTTTTGGCCACAGAATCACAGAATCTGGAATTTAACTCTTGGTGGTCATTTGGACTCCCTTGCAAGGTATGTGTGTCAGCAAACAATCCCCGAACAAAACTTTGGAGCCTAAAGACAAGCTTTGGCCCTGGTGAAGAGGGTAAGGTTACAGGTTTTACCATTAAGTGACCTCTT TCONS_00016200 TCONS_00016201 TCONS_00016202 TCONS_00016203 TCONS_00016204 TCONS_00016205 TCONS_00016206 . 5' 770 TCONS_00016200 TCONS_00016201 TCONS_00016202 TCONS_00016203 TCONS_00016204 TCONS_00016205 TCONS_00016206 . 5' 770 EMBV3_03013 GCCACTCTGCCCTTCTGCTTAAAAGAGGTGGCTCATTACTTCTGTGACCTGGCACCACTA Gene GeneID:526177|LOC526177:XM_002685905:145_cdna Constitutive 0 NULL GeneID:526177 3 GENE LOC526177 NULL similar to olfactory receptor Olfr433 EMBV3_37092 ATCAGAAGCACGCAGGTCATACGCTACTGAAGGTACCAGTGGGTGGAGAAGAAAGAATGG Gene GeneID:539773|C6H4orf14:NM_001038188:128_cdna Constitutive 0 NULL GeneID:539773 6 GENE C6H4orf14 C4orf14 MGC133698 chromosome 4 open reading frame 14 ortholog EMBV3_14183 CGAATGAGTCGTGGAGTGTGCGTCCATTTAGCAATGGTTTCTTGGGGTGTGGGTTGCATA Gene GeneID:789367|LOC789367:XM_002697432:7_cdna Constitutive 0 NULL GeneID:789367 23 GENE LOC789367 NULL similar to olfactory receptor 120 EMBV3_06105 GGCTCAAAGTGGGCCCTGTTCCAGTATTGGTTATGAGTCTTCTGTTCATCGCTTCTGTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40310 AGGAACTGTCAGCATTTTGTTGTTGAAGTGTGGAGTTGTAACTCTGCGTGGACTACGGAC Gene GeneID:100297240|LOC100297240:XM_002694926:9_cdna Constitutive 0 NULL GeneID:100297240 18 GENE LOC100297240 NULL similar to calmodulin 2 EMBV3_37607 TAGTGGAACTGACAGTGGCTAGGTCACTAGCCCCATTTAGAGATCTTCCTTCTGCACAGC Gene BVV0101_009045 + 0 NULL GK000002.2:99540332-99660619 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27537 CTTTGACATGATCAATATGCTGAAGCTTGGATGTTTACTGAACTGCAGCAGATGAGGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25741 TCCTACAGTAACACTTAGTATGTCTGCAGATGTACCTCTGAGTACATATGTAGATAATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24600 CAATTTGTTCGGCCCCCTAGGTGAAAGTACCGAAGAAGAGTTGTGGAGGAGGCTTCAATT Gene GeneID:521092|LOC521092:XM_002700243:8_cdna Constitutive 0 NULL GeneID:521092 X GENE LOC521092 NULL similar to LOC785287 protein EMBV3_31516 TCTCACAAGACTTTCAGGATCAAGCGATTCCTGGCCAAGAAACAAAAGCAGAATCGTCCC Gene GeneID:100295757|LOC100295757:XM_002688061:13_cdna Constitutive 0 NULL GeneID:100295757 6 GENE LOC100295757 NULL similar to ribosomal protein L39 EMBV3_03670 CACCGGCCATGCTCTGCTGTCGGTGCGGAAATTGACAGAAAAACACGAATGGGTAACAAC Gene GeneID:100299975|LOC100299975:XM_002685841:362_cdna Constitutive 0 NULL GeneID:100299975 3 GENE LOC100299975 NULL similar to glycine cleavage system protein H (aminomethyl carrier) EMBV3_02190 GGAGAGAGTGGGCTATTCACTAATCTCTTCCTTATGTGCACTCCACAACTCGACCGCTCA Gene BVV0102_296157 + 0 NULL GK000016.2:3731875-3836692 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249773 TCONS_00238439 TCONS_00240878 TCONS_00185876 TCONS_00218851 TCONS_00064867 TCONS_00176734 TCONS_00252056 TCONS_00152891 TCONS_00209859 TCONS_00176249 TCONS_00038457 TCONS_00135701 TCONS_00200530 TCONS_00206539 TCONS_00189806 TCONS_00175865 TCONS_00189890 TCONS_00088042 TCONS_00207359 TCONS_00070810 TCONS_00175199 TCONS_00009883 TCONS_00206419 TCONS_00020006 TCONS_00019962 TCONS_00175818 TCONS_00166733 TCONS_00048558 TCONS_00019198 TCONS_00048821 TCONS_00208746 32 XLOC_152716 XLOC_145106 XLOC_147542 XLOC_111929 XLOC_132170 XLOC_039591 XLOC_106508 XLOC_154997 XLOC_092656 XLOC_128370 XLOC_106028 XLOC_022281 XLOC_081924 XLOC_122182 XLOC_125061 XLOC_115843 XLOC_105644 XLOC_115927 XLOC_052829 XLOC_125876 XLOC_042587 XLOC_104982 XLOC_005436 XLOC_124941 XLOC_010684 XLOC_010640 XLOC_105597 XLOC_101569 XLOC_028690 XLOC_009878 XLOC_028952 XLOC_127258 Coding TCONS_00206419 XLOC_124941 NonCoding NonCoding - 6:777596-777836 - TSS153926 240 1 TCONS_00206419_1 35 0.995833333333333 1 0 2.13304826522664e-05 0.000107483605529762 0 0 2.6253214890438e-05 1.59749319026802e-05 1.43583404563533e-05 9.15390045682493e-05 0.000128583490963886 3.46337726507645e-06 0.000357507309588398 6.11908812909458e-06 1.49441678085332e-06 2.49673482924751e-05 1.4188781249123e-05 0.000143634761129868 0.00801869171972702 0.000165948809497602 0 7.99047121922353e-06 0 8.47943176763731e-06 0.000113007034178928 0.000183945145961851 4.19179328080862e-05 2.32180844233636e-05 6.51016816948925e-05 3.92939244186217e-05 1.19920264607941e-05 1.60047845683221e-05 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 4e-11 71.6 82.19 0.3 0 noncoding TAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGAGGAGAGAGTGGGCTATTCAGTAATCTCTTCCTTATGTGCACTCCACAACTGGACCGCTCAGAGTTGTTCACAGAGTTATACAGAGAAGAGAAGAAGGAAGAAGGTGGCAGAGGTGGCCAGGAGGATAAATGGGGGGAATGAAAAGGAGGGAGACAGATCCAGAGAGTAATCAGTTCCCTAAGTGTTCTCCACTGTCTGGAAC TCONS_00202289 . 5' 1170011 TCONS_00202289 . 5' 1170011 EMBV3_15488 TGAGGCCAATCTTCGGGCCCTCCTCATCTATGCCATTTCAGCAACAGTCTTCACGGTTAT Gene GeneID:100336446|LOC100336446:XM_002689907:12_cdna Constitutive 0 NULL GeneID:100336446 8 GENE LOC100336446 NULL CDW92 antigen-like EMBV3_38280 TACACTAAGATGTTTTCCCAAGGCATATGTGGGTCTATGACCTCCAGCGAAGGATAGCCC Gene BVV0102_326719 + 0 NULL GK000008.2:79244665-79336287 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16645 CCATGCTCACCCCTCCAAAGCCTTTTTCTGAGATGATGCTGGGGGTTCCAAAACTGATAG Gene GeneID:613386|FGF11:XM_002695787:303_cdna Constitutive 0 NULL GeneID:613386 19 GENE FGF11 NULL fibroblast growth factor 11 EMBV3_17244 GGTTGTTTCCACCTTGTATGCCCTGCTGACGTTACTACCTGTAATTCACTTCTCGTAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08276 AGGTTCTTGGAGGATTTCTACCTTCCCTCCTGAAGACCTGGATGTGGACTAGAGTGGGTC Gene GeneID:532673|CHD3:XR_082713:228_cdna Constitutive 0 NULL GeneID:532673 19 GENE CHD3 NULL chromodomain helicase DNA binding protein 3 EMBV3_42349 GTTGGCATGGGCCTGAGGACCAGGCTGCGTGGGCAGAGCGCGGACACAGCAAGCAATAAA Gene GeneID:616297|LOC616297:XM_002692255:1556_cdna Constitutive 1 NULL GeneID:616297 13 GENE LOC616297 NULL similar to MRG-binding protein EMBV3_13092 GCTGTCCCCTCTTTCCATTTTCACAATGCCAAATGTTTATCTTGGTGCATATGTGGTTAC Gene GeneID:507137|ARL6IP6:NM_001034281:76_cdna Constitutive 0 NULL GeneID:507137 2 GENE ARL6IP6 MGC128378 ADP-ribosylation-like factor 6 interacting protein 6 EMBV3_17541 CCTCCTCATTTCACAGGTAAGGAATCTGATGTTTAGAAGTTAATCAACCCCCTCTCTGTG Gene GeneID:615205|HAL:NM_001105440:67_cdna Constitutive 2 NULL GeneID:615205 5 GENE HAL NULL histidine ammonia-lyase EMBV3_00616 GCATGAAACAAGTCTAACACTTCAACTCGGACCCTAAGAGGGAGTGCTTAAGCTCCAGTC Gene BVV0101_018468 + 0 NULL GK000009.2:98376381-98612088 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06042 CCCAGGACGAACCCGAGGAGCCACTGAGCGAGTTCAAGCCCTTCTTTGGGAATATAATTA Gene GeneID:767865|LOC767865:XM_002696152:81_cdna Constitutive 0 NULL GeneID:767865 19 GENE LOC767865 CBX4 chromobox-like protein 4 EMBV3_28792 TCCTTGAACTTGGATCACTGGGTGAGGGGGCTCGATCCCCAAGCCAATGCAGGAAGCCGT Variant GeneID:508464|GOLT1A:NM_001075361:40_cdna 535^646 1 EMBV3_26814 GeneID:508464 16 GENE GOLT1A NULL golgi transport 1 homolog A (S. cerevisiae) EMBV3_28305 AGATCCAGTACCTGATGGACCTGGGCGCCAACCTGTGGATCACCAAGCTCTGGAAGTTCA Gene GeneID:513295|GAL3ST1:NM_001101972:59_cdna Constitutive 0 NULL GeneID:513295 17 GENE GAL3ST1 MGC140153 galactose-3-O-sulfotransferase 1 EMBV3_17283 GACGTGCAGATCAATGACATTTCTCTGCAGAACCCCCTGCAGGTCCTGGTGAACGCCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09564 CACAGGCCTCTCATTGCGTGGATTCTCTTACTGTGGAGCACGGGCTTTAGGTGTGTACAA Gene BVT0102_253213 + 0 NULL GK000004.2:56548606-56603195 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20629 CTGCTGGTGACGCAACACCCTGGGGACTTCAAACCTGCGGATTAAACTGAAAGCCACAAT Gene GeneID:539860|SETD2:XM_002697109:16_cdna UTR3_Alt 2 NULL GeneID:539860 22 GENE SETD2 NULL SET domain containing 2 EMBV3_23446 GCAGATTTAGCCAAGTTCGTACGTAAGGGAGATAATTCGTGTAGATCTTCTGACAAATCC Gene GeneID:510233|FAM175B:NM_001166587:27_cdna Constitutive 4 NULL GeneID:510233 26 GENE FAM175B KIAA0157 BRISC complex subunit Abro1 EMBV3_07696 GCTTCCTGCATGAAGTGCCCCTTGGACAGGAAATAGAGAATGTAGTAGAGACCCTACCTA Variant GeneID:515476|ORC6L:NM_001046201:249_cdna 220^655 2 EMBV3_21897 GeneID:515476 18 GENE ORC6L MGC128736 origin recognition complex, subunit 6 like (yeast) EMBV3_31140 CCATGAACACAATCCTAGAGTTTTAGGCGTTAAGGCATGCAGCTTGATGTGCAGGATAAT Gene BVT0102_176271 - 0 NULL GK000018.2:43068519-43089834 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083257 TCONS_00083258 TCONS_00083263 TCONS_00083259 TCONS_00083260 TCONS_00083262 1 XLOC_051217 Coding TCONS_00083260 XLOC_051217 Coding Coding ZNF507 18:43030137-43071770 j TSS62615 4932 1 TCONS_00083260_1 288 0.0129764801297648 5 0.881653535741737 6.46465975784977e-05 0.000441160319028478 0.000239706333365552 0.000586539526025682 1.8474755125474e-09 0.000462199408721164 0.000646674196288493 7.55972676107176e-05 0.000999970501194501 2.03682824247018e-05 0.000670041113071418 8.14562628569877e-05 1.15509568415556e-52 0.000394182477483317 0.000627739685920385 0.00231944107204612 0.00270793680976114 0.000882345788857008 1.98709751330852e-07 0.000555952337698066 0.000209346716713095 0.00297346417338612 0.00295323360536073 0.000346488672032415 8.99208079472788e-05 0.00046354442137113 0.000259172499210792 0.000752574232432759 3.24443112906055e-15 0.000229994047441154 NM_001206198.1 ZNF507 Bos taurus zinc finger protein 507 (ZNF507), mRNA. 0.0 1494 99.88 0.168491484184915 NM_014910.4 ZNF507 Homo sapiens zinc finger protein 507 (ZNF507), transcript variant 0.0 1701 76.37 0.484184914841849 TCONS_00083260_1 sp|Q8TCN5|ZN507_HUMAN ZN507_HUMAN Zinc finger protein 507; 1e-135 411 76.47 0.927083333333333 2 coding 0 0 0 0 -0.0169633616589757 0.956213005652909 0.035756389646473 0.451088796349453 TCCTGATGAGGATGGGGAAAGCGGCGTAAAAGAGGGAAAAGAGCCGTGAGAGAGTTGGGCGAGGACGAGGGCGAGGGCACGGCCGGCTCCTGGCCGGCAAAGGAGGCTCGCGGAAGCAGCAGCCGCCGCCCGACCGCAGATATGGAAGAAGGCAGCAGTGTTGCCATGTTGGTGTCAGATATTGGGGAACAGGAAGCTATGTTGACTGCCAAAACTGTCATCAGTTCATCACTGGAAATTGATGAACAAAGAAAAGCTAAAACAGATCCATTAATCCATGTTATCCAGAAGTTAAGCAAGATAGTGGAACATGAAAAGTCACAAAAATGTCTTTTAATTGGCAAAAAACGGCCACGTTCTAGTGCTGCAGCACACTCTCTTCTTGAAAGTCAAGAATCTTGTGAGATTCCAGCTAAAGTAACCCAGTCACCTGCTACTGATATTAGAAGGGCTGAGATGTCTCAAATACATTTTACCCCTGACTCTCCTGCCCAGAGTGATGGGAAGGCTATGTCTTACCAGTGTAGCCTTTGTAAGTTTCTGTCATCATCTTTTTCTGTGTTAAAAGATCATATCAAGCAGCACGGTCAGCAGAATGAAGTGATATTAATGTGCGCAGAGTGCCATATTACATCAAAAAGCCAAGAGGAACTTGAAGCTCACGTGGTAAATGACCATGAAAATGATGCCAACAGCCACACTCAATCCAAAGCCCAACAGTGCATAAGCCCCACCAACCCCTTGTGTCACCAAACCTCAGAAAGAAAGAATGAAACCATTCCTGACATCCCAGCAAGTGTGGACAACCTACAGACTCATACTGTCCAAACAGCGTCCGTGGCAGAAATAGGGAATAAGTCTTCAGTCCAGAAACAGTATAGATGTGATGTATGTGATTATACAAGTACAACATACGTTGGTGTCAGAAACCACAGACGAATCCATAACTCTGACAGCCTTACAGATGCTCATTGTGTGGGTATGTGTGCAGCCATCCTCCTTCTTTGAAGTCTCACATGTGGAAGCATGCCAGTGACCAAAATTACAACTACGAACAAGTGAACAAGGCTATTAATGATGCAATTTCACAAAGTGGCAGGATTCGGGGGAAATCCTCTGGAAAGATGGTATTAAACAGCAATGAAGAAAGAGCCGATTCTCTCACTTCTGGAAGTTCAGAAAATTTGGTGTCATCCTCAGAGCTGATTCCCCAGGCTCCCAATGAAGTCAGAGGTCCCAACGAGAATGAGAAGCTAAGCCCTGCAAGTAATACCTCAAAAAACTCCAGTCTGGCCCCTCCTGGCGTGGAGTACTGTGTTCTACTCTTCTGTTGTTGTATATGTGGTTTTGAATCTACCAGCAAAGAGAATCTCTTGGATCATATGAAAGAGCATGAGGGTGAAATTGTAAACATCATCCTGAATAAGGACCACAACACAACTCTAAACACAAATTAGATGGAATTGTTATCCAAAGAGGAAACCAGCCGAGGAAGACTCCTTTAAACTGCAGTCTGCCCTTCGTGCTGTCCAGCAACTTACTAGACACAGAAGAAATAGTTGGTGTGATTCTTGAGGAAATGACAGATGGTACTTTGGAACCAAATTTGTAATGTAATAAAAGAAATTCCAAATAGATAAGGGGTAATAATATTTAAGCATTTGAGTGAGGGGAAGTGGGTTGAGGAGGCAGCAAAGATATAACCTTATAATAACCTTCTGTTACCTCTTAGTTTGAGTGTATTTATTATTAAAAGCTTATTATAGTGTAGAAATGCAAGCAAAAGAGTTAAGAAGGGGCTTTTCAGGAACTATTCCAAAACATACTGTTAACTAAAGTGTCACAGTCTTAAGCAGACCTTAGTTTTCTTTATTCTCAATTTTAACATGAATGACAGGCCTCTTGTGAGAAATGGGAGGCAAGTGTCTGAGGGTTTGTGGTATCAACAAGAAAAAAAAGATTATTACAGGGCTTTGAGATGATCGATCCAAATCTTTCGCCAGATTGATAGGAATAAATCTACACTCAACCTGAGATATATTAATACTTTACTCTTTAGAAAGAAAAGAGATCTCTAAATCCAAATCTAGATTATAAGTAACCATTTACAAAGTAAATTATTGTCTTAAATTTACAGTGAATGTCTTGTGAGCAAAAGAGGAGAAAGGTGAATTCCTACCGACCTCAAATCAAAACTCAAGGTTCATAAAAACGTGGAGCACAGTGCACTTCTCAGAGATTCTTTTCAGAGTGTGGATAGAAACCCCAGTTTCCTCAGTAGTTACCTAGGCCTTCTAATCCGCTCTTCTAAACTAGGCCAAGCTTGCTGTCTAAAAAAGTCTGTTAAAACAACGAAGTAGGCAACTGCGTCTAGCCATGAGACCTTGGAAATAGTTTAAACTGTTAAATAAAAATCATTTAGGGGAAGTGGGATGAAATTCAGAAGCCCCTTCAAATGAGTAATACTATTGAGATTTTATTTCCTTTAGTTTTTTATTTAGTTACACTTAGCATACGAAGTATAACCAAATGTGGCTAAAATATAGTAAAAAAATCCAAGTTTTTCTAAAACTTTTAATAACAAAAAACATTTGGGTTTCTCCTATCCAGGAAATTGCATTTTTTTTTTGTTGTGCAATAGGACACATGGGAAGCCAGTGAAAACGCGCCATCAGATAGATGAAATCTTCTCATTAATTACACATTTTGTATTCGAGCGTATTTCAAAGGGTGAAGATAGCAGTTGTTGGTTTGCTCTTGTAGCCCTGATCATTGTGTGTGCATTGTTCTGCTAATGTCAGTTCTGCCTACAAATCAGAAAGCGGCGGTGCACCATGCCCTGAGCCATCTTCATGGTGCTCTTTCTGAACCTGACTCTTCATCCTCTAGAGCTAAGGCTGTGACTCTCATAAGCTTAGAAAACAGTGAAACGGAAGTTTTTGAGTAGGATACTCAATGGACACATTTTAGGAAAGAATTCTCTTCCCAAAGTCCAGGTTTGAGTCAAATGAATTAACATTTTTCAGATAGCCTTAGGAACTACTTAAGCGGGGCCAGGCACTTGAAATATTGTCTGATTTTTTTTTTTTTTTTAATCTCATTTGATGGTGATATTTGAACAAACAGAATTGATTGTAACTTTGCAGCTGTTTAATTTAGGTAGCTTTAATTTATTTGTGAAAGTTAATCCATTTCTGATATCTGGTTTTTAAAGAGAAGATGAATTCTTATATACTAAACTGCATTACTCAAGACCCCATACAGGCCATCCAAGTTTCCCTCTTCTTCCCCCATAAAGAGGTCTCCCTCAGAGCTTCCTGAGGAAGGCCTCTGAAAAAAAAAAAAAAAAGACCCCATACAGTCGGTTTTCTCATTTTCTCCTGTTTTCAGGATTAAAACACAGTGAAATTTTATTTCAAATTCAAATGATACATTTTAAATGGTTCCATTATTATTATATTGTTTTCACTCAGATTTTTCATTACTGGTGGCTCTGGCTCAGTGTTTCTGTATAAAAATCTATTACTCTGAAAACTGACAACCTTAGAAGAGTTTTTTTGTTTCATAAATTTTCCTTGGCTTTAATTTTACATAATCATTTGGAAAATATTAATAACTAAAAAACGTTCCCAAAATTTCAACAATGAATTTTTGAATTAACTTTCTTCATTTCCTTAAACCACTTCCATTGGTTGTTAAATTTTCCATTTGGAATCACAAATTTAAATTTTACCTAGCTCATGGGAAAAAAATTAACCCAGAAGTTCAAAAGTCTTAAATATTCATCTGACTCTAGCCTAAAATATCTCCAAAAGCTTTCTCCTGGCCTGTAGGAGGAACCATACACCAAAAATGTTTTGTACTTTCCCATAATGGTTTTGTGACAAGCCTTAAGTTAACTGTCTCCACCAAGAACAATTGAGTATTTCTAAAAGTACTGATGAAGACTAAATATGCAATTTTAATTCTAGAAGAGATAGGTATTAAAATAATCAGCAGGAATTCTCTTTGTATAGGAATAACATTTACTGGTACTCGATCTTTTGTTATAGAAAACTCAGTATGTGTTTTCCATGCTGAACACTTAAATTCTAAGATTTGGTAGTGAGCATAGTTTTTAAAACAAACTTACTGGATAAGGCAAAGGTGGGGAGGGGGAAGATGATGCATTCTGATCATTATAAATAATATTTTATCAGGGCTCTATCATTTTCTCTTTCTCTAGTAATCCCGAATATGGTTGGTATCCCCAGTGTTCTAACAGTACCATGCCTGTATTCCAGTTGACCTGTAGACTTCAAGCTCTGAGTCCAACCAGCGCAGTGTAGTGACACTGACTGAAGCCTTTATTCTAGATCTTTGGTCCTTCGAGGTAGCTATCAGTGGCTTTGCTACTATTTCTTTTTTTTTTGTCTCTTCTCACAAAGCGAATGGTGGGCACCTACGTTTACATTATATCTTCCTGCAATGTACTTGGCTTGACAGAGACAAGCAGGCTTCTCTTTGAGACTTACTATATTTTTAGTTTTCATAGACACTTATTTAATCTTTTTTTATTGTACAGCAAGGTGCTCTAAGTAATATTCTATAAAATATATTTAATAGAAATTTGAGTTTGATATTCATGGACATGAATACATGTATTTTTTTAAGAAATAAGTATTGTGTAACACTACGGCATTGCTTCTATAGCCAAAGTCTGAAAATTTCCGAAACACTGACATGTAAAGACTACAGTTAATTCTGACACTGTATCTCATTAAAATAGGATGATTTGCATTTTGTAAAATTATCCTGCACATCAAGCTGCATGCCTTAACGCCTAAAACTCTAGGATTGTGTTCATGGTAGAACAGTTTATCTGTTCAATAAACAGCGAAGCAAGGTCTTAGCGCTTCTTTNAACTACCTTGNAAATACTGTACAATGTTAG EMBV3_20044 GAAGACTATTTAGAGCAAAGGGATGTCTATCTGACTGAGTGCCAACAACAGCTCCAGCAG Gene GeneID:528249|LOC528249:XM_002692690:85_cdna Constitutive 0 NULL GeneID:528249 14 GENE LOC528249 NULL similar to Uncharacterized protein C8orf45 EMBV3_04969 TGGACCAGTGGGACTGAGAGTTGAAAAGTGCAATGGCTGGTGAAAGGACAGTTGATGGCT Gene BVT0102_304281 + 0 NULL GK000002.2:125600969-125629833 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14560 ACATAAGAAAGGCCCCGTGTACCACCCGCCGCCATCACTGTCCCTGATTTCAGAGGCTCA Gene BVT0102_249984 - 1 EMBV3_18617 GK000029.2:50570676-50653559 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168127 1 XLOC_102962 NonCoding TCONS_00168127 XLOC_102962 NonCoding NonCoding - 29:50616608-50617224 - TSS126105 616 1 TCONS_00168127_1 57 0.288961038961039 1 0 0 0 0 0 0 9.67817246497104e-07 0 0 0 0 0 0 0 0 5.68900464919868e-07 0.000836080222183614 0 0 0 1.29715575513159e-06 4.92813436138367e-07 0 0 0 0 2.28749901689929e-06 0 0 0 0 NM_001104968.1 ZNF266 Bos taurus zinc finger protein 266 (ZNF266), mRNA. 8e-76 288 94.57 0.297077922077922 0 noncoding ACCTCCAGGTTGCCTTAGTGTGGACACCAGGGGAGCCCCCACCTTCCTCCCCAGGAGCCAGGCCCTGCCAGCACCTCCTATCTGGTCCAGGCTCTGAGTGCCTGCTTGCGGGGAGGCTTAGAGCTACTCCCATCTCCAGGATCCGATGTGAGCACCACTGAGGCACGTCTGAAGGACACTCAGAGTGTCTCCCGACACATAAGAAAGGCCCCGTGTACCACCCGCTGCCATCACTGTGTCTGACTTCAGAGCCTCAGGTGCCAGGTCGCCCCATCTCTGCCTCCTGTCCTGACCCAGCTTTGCCTCTCAGGCCCCAGGCCCCATACCAGGAGGGTGACTCCTCTTCTCTGGTGATCCCTGAACTCTCCTGCTTCCACATCACTGCAGAATTGTTGGTTCAGTTCAGTTCAGTTGCTCAGTTGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATTGCCAACTCCCGGAGTTCACCCAAACTCATGTCCATCGAGTCGGTGATGCCATCCAGCCGTCTCATCCTCTGTCATCCCCTTCTCCTCCTGCCCCCAATCCCTGCTGGAGTGGTCACCTTCACCGAGAACAACATTCCAG TCONS_00164249 TCONS_00164250 . 5' 36336 TCONS_00164249 TCONS_00164250 . 5' 36336 EMBV3_02913 GCGGATGGGCCAGCTTGGTCTCAGCCTCCCTGCTACTTTGGTTCTCATTATGTTTTATCT Gene GeneID:534323|SERPINB5:NM_001098080:152_cdna Constitutive 0 NULL GeneID:534323 24 GENE SERPINB5 NULL serpin peptidase inhibitor, clade B (ovalbumin), member 5 EMBV3_40946 GGGAAGCGTACTCGTTCTGACACTGAGCAGGCAGTTGAGATAGAAGATCGGAGGATCCAG Variant GeneID:533001|THOC5:NM_001083716:68_cdna 269^412 1 EMBV3_00108 GeneID:533001 17 GENE THOC5 MGC148498 THO complex 5 EMBV3_23923 GCTGGCTGGGCGGCTGCCTCCTGATGTCAGTTACAGGAAATTCCAAGATACATGCACGAG Variant GeneID:767864|IL10RB:NM_001076975:61_cdna 89^212 2 EMBV3_26068 GeneID:767864 1 GENE IL10RB NULL interleukin 10 receptor, beta EMBV3_18361 TGGGTGTTCAGATGGAGCAGCTTCCTAGTCATCCTACTAACAGAAGAGCCAAAGAGGAGG Gene GeneID:767912|C3H1orf182:NM_001076989:245_cdna Constitutive 0 NULL GeneID:767912 3 GENE C3H1orf182 C1orf182 MGC128047 chromosome 1 open reading frame 182 ortholog EMBV3_36621 CGGCATTAATGCTGAACTGGATCAAGTGTCCTCAGATTCACCATGGTGGAAAACTCTGAA Gene GeneID:781790|ZNF23:XM_002694846:767_cdna Constitutive 0 NULL GeneID:781790 18 GENE ZNF23 NULL zinc finger protein 23 (KOX 16) EMBV3_16557 ACACATGAACAAAAGGTGCTTTCCTCCCTGGGGTCGTCTCAATGTACCACGTGCTCTTAG Gene GeneID:767833|FBLIM1:NM_001076955:228_cdna Constitutive 0 NULL GeneID:767833 16 GENE FBLIM1 MGC138936 filamin binding LIM protein 1 EMBV3_37212 CAAAATGTGCCCTTTCCCCAAAAGTGATGACTAAAAAGAGGTCTGCCCAGCAATTGAGGG Gene BVT0102_043157 - 0 NULL GK000010.2:15888878-16108198 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30810 CACCACTGGGCTTAAATGGCTCCATTGCAGCTGTCACTATAACTTTAGATCTTGACCAGG Gene GeneID:535125|EFR3A:NM_001076047:29_cdna Constitutive 0 NULL GeneID:535125 14 GENE EFR3A NULL EFR3 homolog A (S. cerevisiae) EMBV3_43403 GAAGTGGGCCAGTCACCATGATATAAATGACGCCAGTCGCGGTACTTTGAGCAGCTATAG Gene GeneID:533862|PAPD4:NM_001046361:200_cdna Constitutive 0 NULL GeneID:533862 10 GENE PAPD4 MGC138008 PAP associated domain containing 4 EMBV3_38311 CGAGTGCTTCATGTGCAGCGACTGCGGCCTGAACCTCAAACAGCGCGGTTACTTCTTTCT Gene GeneID:515410|PDLIM4:NM_001034491:54_cdna Constitutive 3 NULL GeneID:515410 7 GENE PDLIM4 MGC127818 PDZ and LIM domain 4 EMBV3_06328 CCAATGCCCCGCAGGCCAACAGCGACTCCATGGTGATGTACATCCAGAAGAGAAAACGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34887 CTGTCTGGAGATACCAGGAGCTCAGGATGGAGAGGAAGAGACAGGAGGAGGCCGGATTGA Gene GeneID:787340|ANKRD33:XM_002687266:148_cdna Constitutive 0 NULL GeneID:787340 5 GENE ANKRD33 NULL ankyrin repeat domain 33 EMBV3_41636 CTGAGTGAGGCTCCACGTTATGAAACCTGTAACAACCCAAATGCAAAGGGATGACCTCAC Gene BVV0102_243968 - 1 EMBV3_01419 GK000011.2:99573251-99576790 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16625 TGTTGGCAAATCATTCTGTCCCTGTGTCAATTCCAATCCTCAGATGAGCCCTCCTTGGGG Gene GeneID:540633|KDM5B:XM_002694202:713_cdna UTR3_Alt 2 NULL GeneID:540633 16 GENE KDM5B JARID1B lysine (K)-specific demethylase 5B EMBV3_12594 AGCATCGCAGCTCCCACCGCCTCCAAAATAGTCACAGACGCCAATTCTAGGGTTTCAGAA Gene GeneID:504245|ARHGAP17:XM_002698028:229_cdna Constitutive 1 NULL GeneID:504245 25 GENE ARHGAP17 NULL Rho GTPase activating protein 17 EMBV3_04992 CCACGGAAAGTCGCCTGACCACAAAGGCCGCGTCAGCAACTTACTCCACAAGCCTGAGTT Gene GeneID:541209|AMOTL1:XM_002692960:85_cdna Constitutive 0 NULL GeneID:541209 15 GENE AMOTL1 NULL angiomotin like 1 EMBV3_06966 GGCCATTGATCTGCTCCAGTGGTCCAAAGATACCTATTCTCCCGATGAACATTTCTGGGT Gene GeneID:520336|GCNT2:XM_002697593:53_cdna Constitutive 0 NULL GeneID:520336 23 GENE GCNT2 NULL glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) EMBV3_07498 GGCTCCGCCGCCCTAGACTTGCCTATCGGACCCGGCGGCTTCGCCGCCGCACCGACGTGC Variant GeneID:513983|SCAND1:NM_001079591:1039_cdna 280^544 2 EMBV3_29199 GeneID:513983 13 GENE SCAND1 NULL SCAN domain containing 1 EMBV3_34568 CCAGTGTCCCAACTGGGGAAGGGCACATTCCCACTAGAGCTCATGCATTCTTGCTTTTAT Gene GeneID:767948|FAF2:NM_001077020:20_cdna Constitutive 0 NULL GeneID:767948 7 GENE FAF2 MGC129072 UBX8 UBXD8 Fas associated factor family member 2 EMBV3_33139 TGCACGGAGCACAAAAGAAGGAGCCAAAGGCCAGCAAATGAGGAAGGGGCCTAATGCCAA Gene GeneID:512041|EBNA1BP2:NM_001034417:128_cdna Constitutive 0 NULL GeneID:512041 3 GENE EBNA1BP2 MGC127555 EBNA1 binding protein 2 EMBV3_42490 GGTTACTGGACACCAGAAGCAATAAATCGGAACCCTCCTGAAACCTACCGCTCAGGAATG Gene GeneID:512045|C5:NM_001166616:2_cdna Constitutive 0 NULL GeneID:512045 8 GENE C5 NULL complement component 5 EMBV3_38155 ACTCCCTACACTGATGCAAGGATTACAGAAACTGATGTCAAGGGGCTGAGTGAGTTCAAC Gene GeneID:505463|GADD45A:NM_001034247:28_cdna Constitutive 1 NULL GeneID:505463 3 GENE GADD45A MGC128673 growth arrest and DNA-damage-inducible, alpha EMBV3_09788 CTAGCCAGCTAACCTGGATGTGTAAACCTTGCTCCCTCACTGTGCTTCCCCATATGTTGA Gene BVV0101_040305 - 1 EMBV3_32410 GK000002.2:80369682-80641458 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05333 CGCCAGCAGGCTGCCTTCCGGGACTTCGACTTCGTGTCTGAGAGATTCCTGGAGCCCTGA Gene GeneID:505353|PKN3:XM_002691634:327_cdna Constitutive 0 NULL GeneID:505353 11 GENE PKN3 NULL protein kinase N3 EMBV3_13840 GCACCCTGAGACACAACAGACCTTCATCAGGAGCTCTGTCTGTATACCCTGGGTAACCTG Variant GeneID:100138035|TMCO6:XM_002689220:62_cdna 392^575 4 EMBV3_30675 GeneID:100138035 7 GENE TMCO6 NULL transmembrane and coiled-coil domains 6 EMBV3_25274 CAGGATTAAGTGGGCAAGGATTGTATTGAGAAAGATGGCTGTGTGGGAGGAAAGGAGGGG Gene GeneID:617391|CXORF36:NM_001035495:29_cdna Constitutive 0 NULL GeneID:617391 X GENE CXORF36 NULL chromosome X open reading frame 36 EMBV3_30245 TTAAGCAAGCATTACCAGGCCTACGTGCAGGGAGAACTTTGTTGGAGACTGCGGAGCTAC Gene GeneID:788613|MIC:XM_002697324:237_cdna Constitutive 0 NULL GeneID:788613 23 GENE MIC NULL MHC class I-related protein EMBV3_14167 AAGCTGAAGGATCCAGCCAGCAAGGCACTATGCAGACAGCCCCCCATCCAACTAAAACTA Gene GeneID:527479|AGBL3:XM_002686962:38_cdna Constitutive 2 NULL GeneID:527479 4 GENE AGBL3 NULL ATP/GTP binding protein-like 3 EMBV3_01012 GTTAGTTACACTACAGTTGTCACAAAAAGTTTGTAAGGGGATGTCAGGTGCACGGTTACA Gene GeneID:506309|LOC506309:NM_001103088:8_cdna Constitutive 2 NULL GeneID:506309 8 GENE LOC506309 MGC166209 hypothetical LOC506309 EMBV3_04415 GACTCCGACACCAGCACCTTTCTCATGGTGGGTGCTCAGTAAATCTGTCTTAAACCGCCT Gene GeneID:512667|ADAL:NM_001075577:229_cdna Constitutive 0 NULL GeneID:512667 21 GENE ADAL MGC143200 adenosine deaminase-like EMBV3_21078 GATCCCCTTCACCAGTGTGACTCCTGCTTTGAAACTTCCATACCACGCCTGGGCATCCTT Variant GeneID:768066|C16H1orf49:NM_001077123:234_cdna 617^660 1 EMBV3_12618 GeneID:768066 16 GENE C16H1orf49 C1orf49 MGC133837 chromosome 1 open reading frame 49 ortholog EMBV3_19521 TGGGTGTTCCAAGGCTACAGCGTCACCGGGCCAGCGAGCCTGACGCCATGCATGTGGTGC Variant GeneID:513454|PDDC1:NM_001046147:275_cdna 455^548 2 EMBV3_03271 GeneID:513454 29 GENE PDDC1 MGC138028 Parkinson disease 7 domain containing 1 EMBV3_13200 AGCGCTTCGACCCCGAGACCAACTCTGACGCCCGGATGAACCAATGACAAATTTGGAATT Variant GeneID:505144|CHORDC1:NM_001045912:26_cdna 166^430 3 EMBV3_10420 GeneID:505144 29 GENE CHORDC1 MGC137302 cysteine and histidine-rich domain (CHORD)-containing 1 EMBV3_03729 CAGACTTGTCAAGGATGGCCCCTTTGATGAATTACAAGTCAAGGGTAATAAGCCTGCTGC Gene BVV0102_208329 + 1 EMBV3_29922 GK000024.2:4559650-5357672 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138474 TCONS_00138476 TCONS_00138477 1 XLOC_084645 NonCoding TCONS_00138474 XLOC_084645 NonCoding NonCoding - 24:4691180-4700868 - TSS103746 1287 3 TCONS_00138474_4 126 0.0326340326340326 4 0.867554454423454 2.43139568582982e-06 0 0.000648373887536574 1.40694329677434e-10 0 3.59661152939933e-12 0 0 4.64587757784856e-17 0 0 0 7.515522360332e-11 0 0 0 0 0 0 1.92467169675113e-10 1.83888509828881e-12 0 0 0 3.99775544736347e-08 2.48528160231585e-10 2.9070554573074e-08 0 0 0 XM_005195422.1 LOC101903509 PREDICTED: Bos taurus aurora kinase C-like (LOC101903509), mRNA. 2e-10 71.6 90.38 0.0396270396270396 0 noncoding 0 0 0 0 -0.0109552896299464 0.915733775298173 0.0211031815128764 0.661766393463727 TGCAGGCGGACTCTTTACCAGCTGAGCCACCAGGGAAGCCCTGATTCACTAGAACCCTGGCCATGCGATCTGTGCCTGGAGACCTGGGATCTGAGCCCCCGTCCACTGATGAGGCTGCATGTCAGCGGACCCCCAGCTGGAATTGTGGAAGGTCTTCTGCAAAGGCTTAGCCTCAGCACACCAAGCACATCCGGAAATGTTTCAGCAAACATACAAAACTCCTCCTCCGTCCTGTCCTGTAAGTGGCCCCAAGGTGCATCACAGAACCGCCGCTCCCCGTTTCTCCTCCAGGTGCGTCTGCCCGCTCTGCCTGCCCAGACTCCGTGGAGATGCAGGAGGGGGACAGCATCCGCCGCGTGGCAGCTGGGGTCCCAGGCCTGGACAGGCCGGTTCCAGCTCTCGGAGGCTCCTCCTTGGCACAGCCTGGAAGAGAGACATGATGGATGCTTTGACCGCTGCCTCCCAGCGAGGACGCATCGCTGACTCCGCTGCTTATTGACTCTGGCCCGGCTGCAATCTGGTTCGAAGGACATGGGGACTTGCTGACCCCTCCAAGGCGGAGTTAGACTCTGGGAAGTTGTGGTTTTGCAAACCCGGAGTTCTCCAGGCCAGGAGCACCCAGGACTGGGCAATGCGACTACCCCCATGAGACAGCTGACTCCATAATGACTGCATTAAGGAAGGAAGGGAAGGGGCAAAGACCAGGCCTTCTCACTCTGCAGCGACGGCTGCTGTTGCTTTTCAAAATTCCTTCTGCTATTTTTTTCCCCAAATCTACAGCACAGATGTGGTGCCTCGTGAGCAGTTTGCACCGAGCAGGTTGGAGCCCGGCCAGTGACCTACTGAGTGACCGGCTGAGTGAGTGCAGCTTTTGCGGAGGGCTTGCTCTGGGTTACTGGGGGACAGGCAGCCTGTCCTTCCCCTTCCCCAGTCCTGCGGAGGAGTGGAGACCCCGTCTCTCTCGGTAGCAGCCCGGGCTGGAGGCTGCCTTCTTATGGAGTGGACAGGCCTGGAGACTCCCAGACTTGTCAAGGATGGCCCCTTTGATGAATTACAAGTCAAGGGTAATAAGCCTGCTGCAACTTTGACTGTGTTTGTCTATGTAAGATATATTCAATCAGCCATTTGGTACACTTTCTGTTATATGCTGGTTTCTTGGTTTTTTTCCTCCATTAGATGAATAAAGCCATGCTAGTTTCTTTTCATGGCTTCTGGCCCGGACTCCCCGCCACTCCCTAGGAAGGCTCTTTGTTTCAGCCACTCTGCGTACCTGGAGCCGGGCTCTTC TCONS_00138459 TCONS_00138461 TCONS_00138462 TCONS_00138464 TCONS_00138465 TCONS_00138466 TCONS_00138467 TCONS_00138468 TCONS_00138469 TCONS_00138470 TCONS_00138471 TCONS_00138472 TCONS_00138473 s 3' 131442 TCONS_00138459 TCONS_00138461 TCONS_00138462 TCONS_00138464 TCONS_00138465 TCONS_00138466 TCONS_00138467 TCONS_00138468 TCONS_00138469 TCONS_00138470 TCONS_00138471 TCONS_00138472 TCONS_00138473 s 3' 131442 EMBV3_27413 CCGCGGACTGGCCGGGCAAGGAAAGAAGTAAAATATTTTGCAGACTCTGACGAGGAAGAT Gene GeneID:282097|TOP2B:XM_002698750:12_cdna Constitutive 0 NULL GeneID:282097 27 GENE TOP2B NULL topoisomerase (DNA) II beta 180kDa EMBV3_24258 GGTGTCTACATGGTGAACCTGTCTGCGTCTAGGAGAAAATGATGAACTTTCGCTAAGTCT Gene BVT0102_250148 + 0 NULL GK000008.2:7807431-7831435 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226846 TCONS_00226845 TCONS_00226848 TCONS_00226849 TCONS_00226847 1 XLOC_138099 Coding TCONS_00226845 XLOC_138099 Coding Coding MTMR9 8:7827444-7899876 j TSS169492 6331 1 TCONS_00226845_2 549 11 0.912744543082382 0.0003897597835862 7.80690847156973e-17 0.000313094964363251 1.62653324164468e-09 0.000202588440326589 0.000336501105363137 2.61731600876824e-05 0.000618661167224338 0.000281409374198083 3.63942786187313e-11 2.73350893945446e-06 1.69901860796098e-84 5.3555733454787e-10 0.000173909677670241 6.63712582135748e-05 0.000482780722435317 0.00429389587841607 4.21228981876981e-09 2.92513706107754e-14 0.000169682025098014 1.53167429315783e-73 1.02363633106642e-28 0.000767162331695125 0.00134860754144534 0.000433675014954987 3.39384967236245e-14 1.23559910263445e-10 3.96932356505515e-05 5.07677024620513e-05 0.000158341726284529 XR_235444.1 MTMR9 PREDICTED: Bos taurus myotubularin related protein 9 (MTMR9), 0.0 1.139e+04 100.00 0.997314800189544 NM_015458.3 MTMR9 Homo sapiens myotubularin related protein 9 (MTMR9), mRNA. 0.0 2311 84.38 0.337071552677302 TCONS_00226845_2 sp|Q96QG7|MTMR9_HUMAN MTMR9_HUMAN Myotubularin-related protein 9; 0.0 1110 96.17 0.998178506375228 1 coding 0 0 0 0 0.313910392197068 0.117876925863223 0.0203640357254471 0.673930992806097 AGGAGTCCTTAGCGTCTTGGACTTGGAAAGTGCCCCTGGGCGGCCTTCTCCTTCTTTCAGCCTGGCTACCCGAAGCCAGATCTCAAGGTGGAGGCGGCAGCGGCTGGACCTGTCGCAGAGCGTTCTTTTTGCCCAAGTCCTGGGCCTGAGGTTACTTAGAGGTGCGGGAGAAGCGCCCAGCCTGGCCCAGCCTGGGCCTTCCCCAGGCCAGTGACAGTGGCCAGAGGCCTCGCCGCGCCCACCCCAGCCCGGGGCGGGGCGCGGCCTCCGATCCCGGGTTCCGCCCCTACTGCCTGCTGGGCGCGGGATCAGTGTCTTCAGCCCAGGAGCGGTGGAACCGTTTTGCACCTCTGGGACTCCGCAGTCCCCTGGCTCCGGCCGCTGGAGAACATGGAATTTGCTGAGCTGATCAAGACCCCTCGGGTGGATAATGTGGTGCTGCACCGACCTTTCTATCCGGCCGTCGAGGGGACCTTGTGTCTGACTGGCCACCACCTGATCCTCTCCTCCCGGCAGGACAACACAGAGGAGCTGTGGCTTCTCCATTCAAACATTGACGCCATCGACAAGAGATTTGTGGGACCACTGGGTACCATCATCATAAAATGTAAGGATTTTCGAATTATTCAGTTGGATATTCCTGGAATGGAAGAATGTTTGAATATAGCCAGTTCCATTGAGGCGTTATCTACCCTGGACTCCATCACTCTGATGTATCCTTTCTTTTACCGGCCCATGTTTGAAGTGATAGAAGATGGCTGGCATTCTTTCCTCCCTGAGCAAGAGTTTGAACTCTACTCTTCAACTATCAGCGAATGGAGGCTAAGCTATGTCAATAAGGAGTTTTCTGTGTGCCCCTCTTACCCGCCAGCTGTCATAGTGCCCAAAGCCATCGACGACGATGCACTGCGGAAGGTAGCCACATTTCGCCATGGAGGCCGCTTCCCAGTCCTCAGCTATTATCATAAAAAGAACGGAATGGTTATTATGCGAAGTGGTCAGCCACTCACCGGCACAAATGGGAGACGGTGCAAAGAAGATGAGAAACTGATAAATGCCACCCTCAGGGCAGGAAAGCGTGGCTACATCATTGACACTCGACCTCTAAACATAGCTCAGCAGGCCAGAGCCAAGGGAGGCGGCTTTGAGCAAGAAGCTCATTATCCCCAGTGGAGGCGCATTCACAAGTCCATTGACAGGTATCACATTCTTCAGGAGAGCTTAATCAAACTCGTGGAATCTTGTAATGACCAAACACAAAACATGGACCGATGGCTCAGTAAATTGGAGGCCTCCAACTGGCTGACTCACATCAAAGAGATTCTGACAACTGCCTGCCTGGCTGCGCAGTGTCTTGACAGGGAAGGAGCATCCATACTGATCCATGGAACAGAAGGAACTGATTCCACACTCCAGGTTACCTCCCTGGCCCAGATCATCTTGGAACCAAGAAGCAGGACCATCCGTGGCTTTGAGGCCTTAATAGAAAGAGAGTGGCTGCAGGCTGGTCACCCGTTCCAGCAGCGCTGCGCACAGTCAGCCTACTGCAACAGCAAGCAGAAGTGGGAATCACCCGTGTTTCTTCTCTTCTTGGACTGTGTGTGGCAGATACTCCGTCAGTTCCCTTGCTCTTTTGAATTTAATGAGAATTTCCTCATCATGCTCTTTGAGCATGCTTACGCCTCACAGTTTGGAACCTTCCTGGGCAACAATGAAAGTGAAAGATGTAAGTTGAAGCTGCAGCAGAAAACGATGTCCCTGTGGTCCTGGGTCAACCGGCCCAGTGAACTGAGTAAGTTCACCAACCCTCTCTTTGAAGCCAACAACCTTGTCATCTGGCCATCTGTTGCTCCACAGAGTCTTCAGCTGTGGGAGGGTATTTTTTTACGCTGGAACAGATCCTCCAAGTATTTGGATGAAGCATATGAAGAAATGGTTAACATCATAGAATATAACAAGGAATTGCAAGCGAAAGTAAATCTCCTTAGGAGGCAGTTGGCAGAACTGGAGACTGAGGATGGGGTGCAGGAGAGCCCCTGAATCCTACCCACTGCAGCCCTCGCAGGACCGTGCAGACTGGTAGCCCACCTCTGTCTTCTGTGCCCTCAGTTCACCATCACACGTTCAGCCTTGAACTTTTGGACTGACAAGAGCTGAATTCGTGTCCTCATTCTGGTTTGTCAAGAAAGCAAAAGCTGAATATTTATTCAAGGTAAATTATTTTTACAATGGCAACAGCTAAAGTTCTCTGGTATTTACATTAAGAAGTAGTAAATTTATTTTAACCATAGACACTAAAAGTATGTGCAATTTAGAAATAAAGGAGAAGTTTGTTACTGATAAGGTGTCAGTAGTGTCGAATTGGTTCTTCAGGGTTTTGGTCATACATTTTAAATGTGTCAAATGCTGGATGTAACATTAAACCATCATTTAGAATAGATGTTAATTTGTTATAATTAAGCTACAAATACGGTTACCTTAAACCAGAGATGCACTGCCCTTGTCTGAAGTTCTTACTGCACTGGTTTATGTACAGAAGTGTGTGCTTGATTGTTTTGTTTGTAAATATTCTAAGTTTACTAATACTAAGGTTAAGATTTTCTTACTCCCCTGAGCCTTTTGAAAATTTATCTTGACTCTGCTGGTTTGTCCATTAGGCAAATATAATTTAAGTGGAAGTTTATGAACATGACTCAGGTATGTTTTAAACTTCAGAAGCCACTTTGAAATGTTTTTAGTGTTATAGAAACAGTGATGACTTTATGCTATAGGCTGGTTTTTGCCTGCAACTCTAACAGTTCGTGATCAGGTGCTTTCCATGTACATTTCTACTTTGTGGCACTGCTCGTTTTAACAAATACTTTCAATTGTAGTTTTCCCTTAAAAGGACTGTTGAAGGGTAATCTTTAATATCATTTCAATCCCATCTATATATAACCATTTCATTGTAAAACACACCAAAACTGAACCCAGCTTCAGAGTTATGTATCAAGTTAAAATTTTAGTTCTTCAAAATCAACTCTAACAAAATCTATGGCCACATTCAGAAGCTGCAGAAAGCGGTGAACACTTTCTATCTCCAAAAGAGTTGCCAAGACATCTTTTTCCCCGTTTCCTCAGACTAGGAGCAAAAGGCTAGACAACTAATCTACAGTCGGAGCTTTCCTTTTGGTAAATTTGTCTTTCTCCTCTAAGCTCAGTTTTACTCCTGGCCTGTTTTCTTGATTATAGTTAAGAATCTTGGGGCATTCAAGTCCTCACCTAAAGAAAGGCTAATGAGGGAAGGAGCAAAGATGTACTTTCTTGCTATAGGTATTTGTGTGCTGTGTGAAATGTCTCAGTTAATTTTTTAAAAAAGGAAACACTCTAGCTTGTTTAATGGATCCTCAAAATTGAAGGAGCCTTTTTCTTCTCAGTTAACTGACCCATAAGGAAAACTAGAGAATTTTTAGTGATTTTTTTTTTTTTTTTTTTTAAAGAAGTGACTCTCAGTAGTAATGTTGGTTGGCCATTGGCCATAAGGTTTCTGTGGGTGGAAACATTAGAGGGCTTTTTTTTTAGGCTTGGTCATGGAGAACCTGTATGGCATCAGCTTATACCTGTCTTCCTGATGAACATTTCACATGTGAGCCAGAGTATGATGATAACATAGTGTTTCCATTTCTTTTTCTTTCTCTTACTGAGATAGCAATCATAAGCAGTTTGGACAAGTTTGTGTTTTAGTGTTAATTTATAATTAGGGATTGTCCAAACTATAGTTCTGTTTACAGGGCGTAAAAACAAACTTTTGTATCAATGCACTTTCAAAGGGGTCATCTAATAATGTAAATACTAAGGTTTTCCCAAACTTGAGAATTCTAACAAAGACAAGTGTTTTATCAATATAATTTTGAAGAGGGTTGTTAGTAATACTATTAAATTACTCATCCCTTGGATGAAAAGAATAATTACAGTGGATGTATTAATAAGATACTTACTGAAGGTTAAGTTTGGAGAACTGTCTTTGATAAAGGCGGCTTTAAAAACTTTCATAATGAAGAGAATAGTGGCTCAATTAGTGAGGATGCAGATTGCCCCATACAAGCTTTAAGTGAGGTATAATCATGTTCATGTACATTGTGCATCTTCTGTATTTATTCGTTGTGAAGGCTGGTTTCCATTTTTGGAGTGAAAAAAAAGTAAGTCCCCCACAAAGAATATTTTAATACAAAGGACTGCTGCAATACAGTGATCTTTAGATTTAAATTAATAATTTTTTTTTAATCAGAAGAAACAATTTGGTTATATCAAAATGCTGAAACTTTTTGGGTGGTTTAAGACTTGTCAGTAATTGTTTCGAATTTTTTGTTTTGATTTTATTAAATGGGAAGAAAATAAGCAGAAATTATAAAACCCAATAGAAATAAGATAATTTTATAGCTTGTTTTAAACCTAAGAAAAATTAGGTCTTTGAAGCAAGATTTTAAAGTGATTTTGGGGAAAACTTTGGAAGACAATAATCATTTAAGATACATACTTACTTTTGTATGTATCTTATTTTAAAACTTTTCTTTGAACTCCACAGCATGATTTTGTAGAGGTGATAGATAAGTCACTGCTTTTCATTTTAAAGGATAAAATTAAGTGAGATTTTAGTCTTTGATTCAGTCCTTCTTAAGTTAAAAAAAAATTAGTATCATGGAAAAGATCTGACCAGTAATTGTCACTTGAAGCCGAAAAACAAGAGGGACCTTGTGCTGCATTACAAAGAAAACCACTTAAAGATGTGACTCTTGCAGTTGTTGGGTTTCAAGGGTAGCTGCTTTAAGGGTCAGTCCTAGCTAGGGCATCAGGTTCACTTACTGTCAGACCTGCACCTGAGACACAGTTTTGGTGTCTACCCATATCCAGATTTTATGAATTAAGATGATACAAGTCTATTATGAGCACCCTTAATCACAGAGGTATTTCCTGGACCAAAAAAAATGGGCAATATTTGGAATAGTTAATCCTCTGTTCTGGAAGCTTTGAAATTTTCCAGAGAATGAAGTCATTCAGTCCATCTGATCCAGGTTATCCTATACCTCAGGACAACATAGATGAATCATTTCTTATTCTTAAACATGACACAGACTCCACCCACCCACCCCCGCCCCCAGAGCATGTACACTAAGTTATTATAAGTAGTATTTTTGTGTAATTCACCATCTCAACAAAAAACTGTAAAAGACTGGTTGCTACACTCATATTTCGTCTCAGGTAGTAGGAAATGGTTATTTTCTAATTTTTGGTTTCTTAAATAAAAACAACTTCTTTTTTCACTAGTCCTTACAGTCTGCCATCCACAGCATTTTCTTCCTTTCAACTAGAAGCCCAAAAGAGACCTTCTGAAACTCTATGCTAGGTTTTAGAAAGTCTGAACTTGTTATCTAAATCCCCTCAAAAAAAACAAAACAAAAACTAATGTCCTATAATTGAACCACAGTGCAGAACTGTCATTGGTGTTTAATTAATGAAAGATAACAGGACTCAGTGTGGACACTACATTGTCCTGGAAAATGGTTCCTGATGAGAGCTCACTGTCTTCTAGAGCAGTTCTCTTTAACCGTCTGTGAGTATACATATTATATGTGTGATTTCTGATAAAAAGTTGTGTAACACTGCCTGCCTGTCAGCCCAAGACATTTGCTTCAGTTTTCCAAATGCACATATTTTTAGAGAGGTGGTTTATTCTATACAAATACTCCTCGCGTTCTCTTGTTTAGAATCCTTATAGATATATTACCATCTACACTGAAAATCTTGTACTTGCACAAATTATTTAAAAAAATAATAACAGTATGTATTTCTTCAATAACCAGGTACTTGAAGTTTACTCTTGATATATTTGAATGTGACTGTTGGATTTAAGTGCACTATTACTCATGTCTTAGACAATAAAAATTGCACTGTATGGAAAATGTATCTATAATGTACGCTTTGCAAAAACCTCAGAGTGCTGTAATGTACAGGTGTCTACATGGTGAACCTGTCTGCGTCTAGGAGAAAATGATGAACTTTCGCTAAGTCTGTGTAACATTTTAGTATAATCTGTAATGTTCCCTTAAGTGGTAAGTTCACGTATGTCCTGGAATCATTTCTCTTGAATTGGCTGCTCTGTCAAGCTTGGTTTATGGAATCAAAAAACAGTCTTGTTGAACATGGTACAGTTATTTTTAGTGTGTAAGATTTGTGTGTTAAGATCCCCCTCTGCCTAAGAGGACTGTTGCACAAATGCTAGTGTTAAATATCCATAGACAATGGTAATAAAATTTGAATACATTCAAATGCAAGAAATTAAATCTATAGGCTG EMBV3_26882 TCCCCTGCATTGGCAGGCAGATACTTAACCACTGAGCCACCAGGGAAACCTAAGATCATA Gene BVV0102_390483 - 1 EMBV3_09443 GK000002.2:126015377-126030986 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10938 AGAGAAACCTGGAGATGCAATCAAGGGGGAGAATCCTGCCTCACAGACAAGTGATGCCAT Gene GeneID:100300607|LOC100300607:XM_002695240:195_cdna Constitutive 0 NULL GeneID:100300607 18 GENE LOC100300607 NULL similar to zinc finger protein 649 EMBV3_09432 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14096 ATGTTTGCCCCTCTCTGCATCTTGTCTTATCTTTGTGCGCCATGGTCTGGCTGCTTCCCT Gene GeneID:767832|GOLGA7B:NM_001076954:255_cdna Constitutive 3 NULL GeneID:767832 26 GENE GOLGA7B C10orf132 MGC142751 golgi autoantigen, golgin subfamily a, 7B EMBV3_00480 GCAGTCCTGCTGCCAGCTCTCCGACGGCGTCCCCGAGAGGGACTCTGCCGCCGGGGAACC Variant GeneID:525380|IER2:NM_001075871:28_cdna 718^940 1 EMBV3_14545 GeneID:525380 7 GENE IER2 NULL immediate early response 2 EMBV3_33515 CCATCGACGGCTTAGAAGATGACCATGTACGACAACTGTATGGAGCGATGGACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_32243 CCAACTTCTAGAGAGATTTTGTTCTCTGTGTCCTACAGTTCAGGGGCTTAGTTGGGAGAC Gene BVV0102_384386 + 0 NULL GK000025.2:22131514-22178044 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14831 TTCTCCCTCATGGTGGGGTATGGAAGGTACATATTAACAGCATCCAGCCCACAAACAGCC Gene BVT0102_140503 + 0 NULL GK000020.2:31409956-31451298 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116827 1 XLOC_070993 NonCoding TCONS_00116827 XLOC_070993 NonCoding NonCoding - 20:31444994-31445716 - TSS87295 722 1 TCONS_00116827_1 37 0.350415512465374 1 0 5.65333035964649e-05 2.78349712740838e-05 0.000358880623717337 0.000115015930943946 5.47055315284672e-05 4.95436805856028e-06 0.000113080186887481 0.000114689844774203 0.00121302657455517 5.69874074136907e-06 0 0 3.97407359744644e-06 0 1.35905490855141e-05 0 0 0 4.96601397949302e-05 0.000159366933579354 8.4092212936693e-06 0 0 0 0.000316676236494539 0.000263473882900401 0.000121727528798599 0 0 0 0 noncoding 0 0 0 0 -0.0483744756592893 0.712092537138562 -0.0395126690398804 0.415134117757343 CCGGTTTAGAAGCCACTGGTTACTTACTGGTAACTGCATTGCATACTTCAGGCTGTTTGTGGGCTGGATGCTGTTAATATGTACCTTCCATACCCCACCATGAGGGAGAATGAGGGCAGTGTGTGGGCCAGGTAGGTGAGTCTGCTGTGAGGCACCCCCTAAGAATATCTGCAGTGGAATAGCCTTAGAAAGTTGACACATACCAGAGCAGAGATAGAAAAAGTTAGTTGAAAGAATTAAGGCAATTAAGACTTGACTTTAACTTGATTGATTATACTGACTTGTTTAGAGAATTGAACTCTGGAAGGAGATGATCTGCCATGGACTTGTAAAAAGGAAAGCCATAGGTTCGAAGGCAAACAGTGTTGGATTAAGTATAGTCCACAGAAGAAGAGAGTTTAGGAGTAAATTTCAAGTATTCTAGTCTCATCAGCAAAGCAGGTCTTAAAGGGGCCTAGGTGAAGGCGATTGATGGTTTATGGCCTTGGCATATGTCCCCTCCTACTGGGAAGACCATTCTATTGAGAAATGGATACTTCATGTTATCTTAACCCAATAGCATGAAAGAGCTTTCTTTCTAACATCTTCCCAATTCTGTTTACCAATCAATCGTCTGAGGATGACTTGACTTCCTGTGTGTAATCTAGAGGGTGAGGCATGTGGACTTTGAAGGTTGCGGTCCCTTTTGTATTATAACTAATAGGCTGGCATTCTGATTTTAT TCONS_00113682 TCONS_00113683 . 5' 37 TCONS_00113682 TCONS_00113683 . 5' 37 EMBV3_11164 AGTGGAGGGTAGTACTTTTGAGCCACCTGGCTTGGTTCCAGTGACAGAAGCAAGCGTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03316 GGGAATGCAAAAGCAAAATTGAGGGGCAAAAGGAACCACAAGAGGGATATTTTGGGCAAG Gene BVT0102_225696 + 0 NULL GK000018.2:47255088-47345055 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083557 TCONS_00083563 TCONS_00083567 TCONS_00083562 TCONS_00083564 TCONS_00083555 TCONS_00083569 TCONS_00083554 TCONS_00083565 TCONS_00083553 TCONS_00083566 TCONS_00083558 TCONS_00083560 TCONS_00083559 TCONS_00083568 TCONS_00083570 TCONS_00083561 1 XLOC_051294 Coding TCONS_00083561 XLOC_051294 Coding Coding ZNF540 18:47310083-47333617 j TSS62757 4644 1 TCONS_00083561_3 533 0.434754521963824 5 0.802872561934305 0.00170537996247949 0.00216979270716199 0.00113922647029007 0.000952670442534994 0.00128665638190018 0.000274627935916616 0.000945390620065088 0.00109854119519758 0.00258582742908178 0.00025686167884973 1.97738757377887e-05 4.80952432214978e-05 0.000109035689137747 0.000194171675097835 0.000239225620619573 0.000242931640018299 3.22914831864742e-61 0.000111037572119469 0.000832663400075357 0.000656926591846351 6.53845498038666e-05 0.000135437520397922 0.00033869534634772 0.000167569650408179 0.00147869265063221 0.000341248494141457 0.000476393187464508 2.72599081812879e-05 3.17790590059099e-07 1.14226571177811e-13 XM_005219097.1 ZFP14 PREDICTED: Bos taurus ZFP14 zinc finger protein (ZFP14), transcript 0.0 5413 99.90 0.647932816537468 XM_005259110.1 ZFP14 PREDICTED: Homo sapiens ZFP14 zinc finger protein (ZFP14), 0.0 3368 82.94 0.703919035314384 TCONS_00083561_3 sp|Q9HCL3|ZFP14_HUMAN ZFP14_HUMAN Zinc finger protein 14 homolog; 0.0 1021 94.19 0.99812382739212 8 coding 1 1 1 1 -0.108694523550895 0.38160915234847 -0.0259559531439788 0.645748937814006 CGGCTTCCTTGCGGGTTTCGGCTCGGAAAGATCTGGCTTATCTGAACTCTGCAGATCTCTAACAGAAATCTTGAAAAGGACTGACCAGTGCTTGCAGTTCAAAACAATGGCCCATGGTTCAGTGACTTTCAGAGATGTGGCCATTGACTTCTCACAGGAAGAATGGGAATTCTTGGACTCAGCACAGAGGGACTTATATAGGGATGTGATGTGGGAGAATTACAGCAACTTCATCTCACTAGCAGGTCCTTCCATGTCTAAGCCAGATGTGATTACCTTATTGGATGAAGGGAAGGAACCCTGGATGGTTGTGAGAGAAGGAACAGGAAAACATCACCCTGACTTGGAGTCCAGATACAGTGCCAATATTTTATCTTCAGAAAAGGACATTTACGAAATATATTCGTTCCAGTGGGAGATAATGGAAAGAATTAAAAGCTGTAGCCTTCAGGACTCCATTTTTAGAAATGATTGGGAATGCAAAAGCAAAATTGAGGGGCAAAAGGAACCACAAGAGGGATATTTTGGGCAAGTGAAAATTGCTTCTGAAAAAAGGACCACTTACAAAAAGCATAATCTTCTTGCTGAATATCAGAGAGTTCATAATGGAGAAAAGTTGTATGAATGTAAGGAATGTAGGAAGACCTTTATTCGTCGCTCAACACTTAGTCAACACCTGAGAATTCATACTGGTGAGAAACCATACAAATGTAAGGAATGTGGGCAGGCCTTTAGACAGCGTGCACACCTTATCAGACATCACAAACTTCATACTGGTGAGAAACCCTATGAATGCAAGGAATGTGGGAAGGCCTTTACAGTCCTCCAAGAATTGACTCAGCATCAGAGACTTCATACTGGTGAAAAGCCCTATGAATGTAAGGAATGTGGAAAGGCCTTTAGAGTACATCAGCAACTCGCTCGACATCAGAGAATTCACACTGGAGAGAAGCCCTATGAATGTAAGGCATGTGGGAAAACCTTTAGGCAGTGTACACACCTTACTCGACATCAAAGACTTCATACTTCAGAGAAGCTCTATGAATGTAAGGAATGTGGGAAAGCCTTCGTATGTGGTCCAGACCTTAGAATACATCAGAAAATACATTTTGGGGAGAAACCCTATGAATGTAAGGAATGTGGAAAGGCTTTTAGGATATGTCAACAGCTTACTGTCCATCAGAGTATTCATACTGGTGAGAAACCCTATGAATGTAAAGATTGTGGGAAGACTTTTAGATTAAGGCAACAACTTGTTCGCCATCAGAGAATTCATACTCGTGAGAAACCCTATGAATGTATGGAGTGTTGGAAGACCTTTAGTAGTTACTCACAACTTATTTCCCATCAGAGCATTCATATTGGTGAGAGACCTTATGAATGTGAAGAATGTGGGAAGGCCTTTAGACTGCTGTCACAACTTACTCAACATCAGAGTATTCATACTGGTGAGAAACCTTATGAATGTAAGGAATGTAGAAAACCTTTTCGACTTCTCTCACAACTTACTCAACATCAGAGTATTCATACTGGAGAGAAACCTTATGAATGTAAGGAATGTGGTAAAGCTTTTAGACTTTATTCTTTTCTTACTCAACACCAGAGAATTCATACTGGTGAGAAACCCTACAAATGTAAGGAATGTAAGAAGGCTTTTAGACAACATTCACACCTTACTCAACATCAGAAAATTCATAATGTAATTTAATACAAGGCTTTCAAATGCACATTATGTTACAGAACATCAGAAAATTCATTTTTGAGAGAATTTGTTTGATGCTCATTAAGCATAAAAAATTTGTATTACAGAAAAAAATGTTGCTTTAATGGTTGCTTCCATCACCATTCAAGCATTGTCTTCAGCATATTCATATGAGAAAGTAATATAATGAATGCAGGAAAATCTTTAGCCTTATCTATCTTTTATCACCATTTCACCACTGTATTACCAGTGTATTATTGGATAGGTACTTAAATTTCTGTGCCTCATTTTGCTCACTTGTAAAATGGTGATAGTAGTATCTGTGAATATTAGCTATTTATTGCTGCATAATAAAATATCACAAACTTAGTAGCTTAAAATAATACACATTTATTATCTCAGTTTCTATAGGTCAGGTCAACTAACTAGGCATAACTTAGTTGGGTCTTCTGCTTCAGGGCCTCTCACAAGGCTAAAATCAAGGTGTCGACCATGACTGAGTCTCATCTGAAGGTTCAACTGGGGAAGAGATCCACTTCTAACCTCCTGTGGTTGCTGTCCAAATTAATTTCCTGAGGGCTATTGCACTGAGGTCTTCAGATTCTATCTGGCTGTTGGCTGAAGGCTGACTTCAGTCAGTTCCTTGCTACAGGAGCCCCTTCAGCATAACTGCTTGCTTCGTCAGAGAATGCAATCCAAGAAAGCAAGAGTCTGCTAGCATCGAAGAAGCTATCATCTTGTGTTTCTAATCATTGAAATGACATTTCATTACCTTTGCTACCTTCTGTTGCTTGGAAGCAAGGAACTAGGCTGCCGTACACTCAAGGGAACAGGCTTATAGAAGAGTATGAATCCCAGGAGGAAGGGATCACTGGGGCCAATTCAGAGTCAGCCTGCTGTATCATTGTGAGGATTGAGTAGTTAATACTTGGAAAAACAGCAGCCATATAGCATGTTTTCTGTAAATATTATCTATAGTTGTTATTAACATCATTAGTGTTAGTGAATTCATATGAAAGGAAGATCCTATAGAAGTAATAACTAGAAATGCCTTCTGTCACTGCTCAGCACTTATTAAACCTAAGATAAAATCTAGGAGGTTATTTTGAATGTGAGAAGTTCTTCATCACTTGAGCTGCATCAGAAATTTCATGCCAAAAAAAAAACCTGATGAATTTCATGAATATGAGGTTAAGAATGTAGTGGTTGAAGAAGCAAAGAGAAATATGAAATTGTTTTCCCATAATAACAAGGTAAATGTTTTATAGTCTGTATTCTCTGACCACCACTCAAAATTGATTAGAAACTATGAAAAAGATGGCAAAAAAAAAAAAAAAACTAACCACTTGGAAATATAATTGTGTATGTGTGTGCACCCGTGTGTGTATGTTACTCTTGTAGAAAGAAAGAAGACATTCCATTGCAACTAGTAAACTTTTTGATGCTCATAGTATCCCATCTTCAACCAGTAGGAGCTGGGTTTTTTGACATGACACCGGTAGCAGTTTAATAGTTTACTTGGTTATGGCTGCCTAACTTGGTCAGCTTGGGAAGATGCTTGGGTACCAGCTCATCATTCTGAAAACTAATAAATAAAGGGGAAAGTATTTTTTTTTCCATGTGAATCAGGTCTCAGGGTCACCCAAAGCTCATCAAATTTAAGTTTTTTTTTTTAATTTAATGAATCTTACCAGTAAATGCAGAAAAAAAAGATATTTGGATTAGAAAAATCATTTTCTATTTCCTAATTTAAAGAATAATGTCCAGAAAGTGGTCTTCAAGGGATATTAAAACTATTTGGGGAAAGAGTTTATAGTGAGAACTTTATATTGGATTTATCAAGCTGACCATTTCTAAGCCCTTTGGTTGATTTTAACATCTATAAAAGTGAAACTGTCAGACATTATGCACCTCCTGGTATAATGAAGTTAGGAAGTACATGTCACTACCTATGAAGTTTTCTTGTCAAAATAATGAACAGAATGAATCAAACTTTTAAATCAAAAAATTTTTTTAAACCCGAGAACTTGAGAAATGGATGAACAAAGTAAATGTTACCACAGGAAGCAGCCAAGCCGATCCAGAATGTATAAAATTCCCAAAACAATTCCCCAAAATGAGCTGACTTCTTCAACTATTGAGTGGCATGAAAAAAGAAGGGCACTGTTAACAGATTTTTAAAAAAAGACTTGAGGCATATCAACTAAATTCAATATGTGGGCATTATTTGGACCCAGATTGAACAAAGCGTAAAAAGACATTTTGGAGACTGGGGAAAATGTGGACATGCACTGAGTATTAGTTGATTTTTAGAAATACTAGTTTTGTTGTTTAGTTACTAAGTTATATCCATGGATTGTAGCCCACCAGGCTCTTCTGTCCATGGGATTTCCCAGGCAAGAATAATGGAGTGAGTTGTCATTTCCTTTTCCAGGGTATCTTCCCAACCTAGGGATCGAACCTGAATCTCTTGGGTCTCCTGCAATGGCAGGTGGATTATTTACCACTGGTGCCACCCGGGAAGCTCGATAATAATATCAGTGTGGTTATTAAAAAATAAAATATTTTATGATTAGAAATAAATATATAGGAAATAGTAAGATACCCAGATTGTATTAAAATATTCCACAAAAGAAAATTGGCAAAGAGAGCTAGAAAATATCAATAGATTGGTAAAATGTTAATAATTACTGAAGTAGAATGGTTGTTTATGGGGGGTTCATTGTTCTAATATTTTTACTTTTTTATGTGTTTGGAAGTTTCCATAATAAAATATTTAAAATCAAATTATACACTGCTTCAGAAATCATTGTTAATAAGATGCCTGCATATATGAACTTGTTGGATGTCACCAAAGTTCTATTCAGTGAGGAACTTATGCCCCTGAATGCATTAAGAAAATCTTGTTTGTAGGCCTAGGTTTCATCTTCACTTTTCCACAG EMBV3_04784 TCCCTGGCTTAAGTCCTCTTGGAGCTCACCATTAACTCCTCTGTAGAGCCTGTAGGCCCC Gene BVV0102_213655 + 0 NULL GK000019.2:9393116-9441747 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39004 TAAGTGACAAGCGGCTGGAAGTAGTGGGGCTGGAGGGTGCAATTGAGATAGGCCAGATCT Gene GeneID:506348|DGKA:NM_001077860:947_cdna Constitutive 0 NULL GeneID:506348 5 GENE DGKA MGC139979 diacylglycerol kinase, alpha 80kDa EMBV3_21393 AGTCTCCCTCTGGAGCGCGGAACCCGCCACGCTTACTAATTATGCCTGGGCTTCTAAGAT Gene BVV0102_101236 + 0 NULL GK000013.2:43073609-43101946 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00054120 TCONS_00238581 TCONS_00201908 TCONS_00201377 TCONS_00058345 TCONS_00209112 TCONS_00134381 TCONS_00011640 TCONS_00032895 TCONS_00151324 TCONS_00212776 TCONS_00212777 TCONS_00008044 TCONS_00124523 TCONS_00152803 TCONS_00187683 TCONS_00053123 TCONS_00021816 TCONS_00005494 TCONS_00048995 TCONS_00212781 TCONS_00224665 TCONS_00053124 TCONS_00087333 TCONS_00070447 TCONS_00109090 TCONS_00212789 TCONS_00212774 TCONS_00201912 TCONS_00058346 TCONS_00212782 TCONS_00190111 TCONS_00223732 TCONS_00232662 TCONS_00037838 TCONS_00105602 TCONS_00056469 TCONS_00070804 TCONS_00238117 TCONS_00110693 TCONS_00195921 TCONS_00192190 TCONS_00005489 TCONS_00125029 TCONS_00034471 TCONS_00143669 TCONS_00220008 TCONS_00112864 TCONS_00174931 TCONS_00212787 TCONS_00203952 TCONS_00212775 TCONS_00154455 TCONS_00241430 TCONS_00199375 TCONS_00156814 TCONS_00223729 TCONS_00070449 TCONS_00192189 TCONS_00085042 TCONS_00223718 TCONS_00140800 TCONS_00195920 TCONS_00212786 TCONS_00195298 TCONS_00192192 TCONS_00140802 TCONS_00163708 TCONS_00219910 TCONS_00192191 TCONS_00187642 TCONS_00099296 TCONS_00184696 TCONS_00129429 TCONS_00023650 TCONS_00053121 TCONS_00174930 TCONS_00206327 TCONS_00005493 TCONS_00022175 TCONS_00223724 TCONS_00223726 TCONS_00000662 TCONS_00058347 TCONS_00209707 TCONS_00137919 TCONS_00054100 TCONS_00142119 TCONS_00201910 TCONS_00187682 TCONS_00031956 TCONS_00070444 TCONS_00184695 TCONS_00112243 TCONS_00157094 TCONS_00207792 TCONS_00129205 TCONS_00071277 TCONS_00002733 80 XLOC_006328 XLOC_031929 XLOC_145248 XLOC_123553 XLOC_123023 XLOC_036077 XLOC_127623 XLOC_081384 XLOC_007191 XLOC_019131 XLOC_092086 XLOC_130254 XLOC_003604 XLOC_076069 XLOC_092568 XLOC_113728 XLOC_031657 XLOC_012489 XLOC_001274 XLOC_029126 XLOC_137594 XLOC_052448 XLOC_042225 XLOC_064995 XLOC_123557 XLOC_116146 XLOC_137031 XLOC_142147 XLOC_021667 XLOC_062613 XLOC_034272 XLOC_042581 XLOC_144894 XLOC_066595 XLOC_118173 XLOC_117131 XLOC_076571 XLOC_020687 XLOC_088090 XLOC_133325 XLOC_068759 XLOC_104738 XLOC_124308 XLOC_094215 XLOC_148094 XLOC_121028 XLOC_095274 XLOC_137028 XLOC_042227 XLOC_051775 XLOC_137017 XLOC_085229 XLOC_118014 XLOC_085231 XLOC_100000 XLOC_133227 XLOC_113687 XLOC_059539 XLOC_111408 XLOC_078142 XLOC_014317 XLOC_124888 XLOC_012846 XLOC_137023 XLOC_137025 XLOC_000168 XLOC_128218 XLOC_084128 XLOC_031909 XLOC_086544 XLOC_123555 XLOC_113727 XLOC_018201 XLOC_042222 XLOC_068140 XLOC_095554 XLOC_126307 XLOC_078064 XLOC_043049 XLOC_000671 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_06272 ATGGCATCCACTATGATCCACTTCATCTTGTCTTCCCTGACCCAGACACCCCTCCTCTGA Gene GeneID:539931|YOD1:NM_001080309:100_cdna Constitutive 0 NULL GeneID:539931 16 GENE YOD1 MGC151971 YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae) EMBV3_15389 CCCCCGACCACCCTTCGTGGAGGTACCTCAGCAGCTCGGGGTCCAGGTCTGGCGTCTCGT Gene GeneID:100140102|LOC100140102:XM_002700099:224_cdna Constitutive 0 NULL GeneID:100140102 X GENE LOC100140102 NULL hypothetical protein LOC100140102 EMBV3_43281 CAGCTGGAGTCTTCGTACCTGAGATGAAAGGAATGTTTCCCAGATCTTACAGAAATGCGG Gene BVV0102_294645 - 1 EMBV3_13417 GK000026.2:44397477-44416759 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24871 TGCCTTCTCAAATGCACTGACCCACACTGTAGCCATATCCACACTCAACTTCTGTGGTCC Gene GeneID:532454|LOC532454:XM_002695732:402_cdna Constitutive 0 NULL GeneID:532454 19 GENE LOC532454 NULL similar to olfactory receptor 410 EMBV3_32313 AGACATATGATTAGAATTGTTGGGATCTGATAGATGGAGTGCAAATGGGTGTAATATAGA Gene GeneID:507820|SENP7:NM_001101888:8_cdna Constitutive 2 NULL GeneID:507820 1 GENE SENP7 MGC152178 SUMO1/sentrin specific peptidase 7 EMBV3_13599 AGTGCAGTGTATAATTTCTGTCTGCGGCTAGAAGCTGTGCCCCAGTTCCACACTTGATTG Gene GeneID:533406|PDCD6IP:XM_002696926:465_cdna Constitutive 0 NULL GeneID:533406 22 GENE PDCD6IP NULL programmed cell death 6 interacting protein EMBV3_23825 TGCATGCACTGAAAGAATTCTTGAAGAAATAAGATGCCCAGCAGCTACAGTGATTATGGC Gene GeneID:281880|KCNA4:NM_174371:8_cdna UTR3_Alt 1 NULL GeneID:281880 15 GENE KCNA4 NULL potassium voltage-gated channel, shaker-related subfamily, member 4 EMBV3_22991 GCAACTTGTAAATCATGGAGTAAGACTGGAACTAACAATTTGCTTAATATCTTTTAGTCC Gene GeneID:541246|KIF3A:XM_002688960:107_cdna Constitutive 2 NULL GeneID:541246 7 GENE KIF3A NULL kinesin family member 3A EMBV3_22896 TGTCCATGGCAAATGCTGGCCCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCA Gene GeneID:100337215|LOC100337215:XM_002690515:508_cdna Constitutive 0 NULL GeneID:100337215 10 GENE LOC100337215 NULL TRIM5/cyclophilin A fusion protein-like EMBV3_36505 CAAGAAGAAGCCCCTGAAGCAGCCCAAGAAGCAAGCCAAGGAGATGGACGAGGAAGATAA Gene GeneID:615251|CCDC72:NM_001163803:292_cdna Constitutive 0 NULL GeneID:615251 22 GENE CCDC72 MGC148581 coiled-coil domain containing 72 EMBV3_27898 GCCTCCACTGGCGCCCTTCACTTTCTTCTGCTGCCTTCACTGAGGATGAGTCCCTGCGCT Gene BVV0102_037555 + 0 NULL GK000009.2:22343686-22454646 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236754 TCONS_00236761 TCONS_00236758 TCONS_00236765 TCONS_00236764 TCONS_00236762 TCONS_00236763 TCONS_00236756 TCONS_00236759 TCONS_00236755 TCONS_00236770 TCONS_00236767 TCONS_00236760 TCONS_00236766 TCONS_00236757 TCONS_00236768 1 XLOC_144567 Coding TCONS_00236762 XLOC_144567 Coding Coding IBTK 9:22267841-22356924 j TSS177166 4344 1 TCONS_00236762_7 1306 27 0.951539031454166 0.00138382581279697 0.00171404727552296 0.0013920124209782 0.000771693941179221 0.000837191258319299 0.000237325326177804 0.00138322354006161 0.00024563022627598 0.00188283724505825 0.000202727780592759 1.13589212581225e-114 5.83315570194422e-05 0.0001159781911252 0.000393103630995087 8.25982362474056e-94 0.000117275850609321 1.15080000553368e-48 1.30962401869843e-05 0.00184216327988512 0.00250904366634099 0.00067170617306765 2.14513857795211e-05 2.96830687775751e-17 9.36694461981623e-18 0.0016700878387491 0.00115479248462312 0.000525273002775068 5.93867079242469e-15 1.52423022254053e-114 4.75467549564252e-29 XM_005210696.1 IBTK PREDICTED: Bos taurus inhibitor of Bruton agammaglobulinemia tyrosine kinase (IBTK), transcript variant X2, mRNA. 0.0 7708 100.00 0.98365561694291 NM_015525.2 IBTK Homo sapiens inhibitor of Bruton agammaglobulinemia tyrosine kinase (IBTK), mRNA. 0.0 5979 91.19 0.980893186003683 TCONS_00236762_7 sp|Q9P2D0|IBTK_HUMAN IBTK_HUMAN Inhibitor of Bruton tyrosine kinase; 0.0 2286 90.34 0.949464012251149 8 coding 0 0 0 0 -0.105106722927939 0.511748879200546 -0.0407815214131696 0.3974452450304 CTCTGCCAGGCGCCTGTAGACGCGGCTGTAGCTGCAGCCGCCTCCAGAGCTGACCCGGGCCTGGGGACCGGCCTCCACTGGCGCCCTTCACTTTCTTCTGCTGCCTTCACTGAGGATGAGTCCCTGCGCTGCCGTGCGTCCACCCCGCGGAGACCACTGGCGCATTTTCATCTAGCGACTGGTCACCCTTGCAATTATGGATATTTAAAAGGATCAGACAGTGTGGAGGGGGAGTTCCCCTCCTCACTCCCCCTTGGTGCTTGACTTCAGGAATAATTTATAAACTGTGGAAAGTTTTCTTTTTTAAAGAAAGAACTTGTATTTGATATAAACTTTATAGAGCTATTTATAATTTTTTGATTTAAATGCCAAAATACATTGTACAAATCTATATAGTTTTATACTGTTGCCAGGAGGATTTAAATTATAACCCTAAGCAGGCCGTTTATTCTCTATCAGTCTTTCTGAATAGCAGCTTTGTGGCCTGGCTTTTTCATTTTTTAAAATTATCTGACTATTCTGAAGAAGGAAGCTGCATAAAAACAAATAGGATGAATTCCTCCATCCCTGACTGCACATCAAAGTGTCGCTCCCTGACGCATGCTTTGGATGTCCTTTCTGTGGTAACGAAGGGGAGTGAAAACCAGATTAAGGCCTTTCTATCCAGTCATTGTCACAATGCTGCAACCATCAGGGATGCCTTTGGTCGGAATGCCCTCCACCTTGTTGCCTCCTGTGGGAAAAAAGGAGTGTTAGATTGGCTTATTGAGAAAGGAGTGGATCCCTCGGTGAAAGACAAGGAGTCAGGATGGACAGCTTTGCATAGAAGCATTTTTTATGGGCATATTGATTGTGTTTGGTCTCTACTGAAGCATGGTGTTAATCTGTATATTCAAGATAAAGAAGGCTTGTCAGCTTTGGATCTTGTAATGAAGGATAGACCAACTCATGTAGTATTCAAAAATACTGATCCTACAGATGTCTACACTTGGGGAGATAATACAAATTTCACCCTGGGTCATGGAAGCCAGAATAGCAAACATCATCCAGAGTTGGTGGATCTGTTCTCCAGGAGTGGGATTTATATCAAGCAGGTGGTGCTTTGTAAATTTCACTCAGTGTTTCTGTCTCAGAAAGGGCAGGTTTACACCTGTGGTCATGGTCCTGGAGGACGATTGGGCCATGGAGATGAGCAGACATGCTTGGTCCCTAGGCTTGTGGAAGGACTGAGTGGTCATAATTGTTCTCAAGTAGCGGCTGCTAAGGATCATACTGTTGTATTAACTGAAGATGGATGTGTTTATACATTTGGTCTAAATATTTTTCATCAATTAGGACTCATTCCTCCGCCTTCCAGTTGTAATGTACCCAGACAGATGCAGGCAAAGTACCTGAAAGGAAGGACAATCATTGGAGTAGCAGCTGGCAGGTTTCATACTGTGCTGTGGACTAGAGAGGCTGTTTACACTATGGGACTAAATGGTGGACAATTGGGTTATTTACTAGATCCCAATGGAGAAAAGTGTGTAACTGCTCCTCGTCAAGTCTCTGCCCTTCATCATAAGGACATCACTCTGTCTTTGGTTGCTGCTAGTGATGGGGCTACTGTCTGTGTTACCACAAAGGGAGATATTTACTTACTTGCAGACTATCAGTGCAAGAAGCTGGCTTCTAAACAACTGAACTTGAAAAAGGTTCTTGTATCTGGGGGGCATATGGAATACAAAGTTGATCCTGAACATTTGAAAGAAAATGGGGGTCAGAAAATTTGCATTCTTGCAATGGATGGAGCTGGAAGGGTATTTTGCTGGAGATCTGTCAACAGTTCTATGAAGCAGTGTCGATGGGCTTATCCACGCCAAGTCTTCATTTCTGATATTGCTTTAAGTAGAAATGAAATTCTTTTTGTCACACAAGATGGAGAGGGATTTAGAGGGAAATGGTTTGAAGAAAAAAGAAAGAGTTCTGAAAAGAAAGAGATTTTATCAAACCTTCATAATTCCTCACCAGATGTGTCTTGTGTCTCTGATATAAATAGTGTATATGAAAGAATTCGACTTGAGAAACTTACTTTTGCCCATAGAGCTGTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTTGCAGTCTTGCAGTCAGATCCTAAAACAAGCCTTTATGAAATTCCAACTGTGTCCTCCTCATCCTTTTTTGAGGAGTTTGGCAAGCTGTTGAGGGAAACGGATGAAATGGACAACATCCATGATGTGACATTTCAAATTGGCAGTAGACTCTTCCCTGCACATAAATATATTTTGGCAGTGCGTTCTGACTTTTTCCAGAAATTGTTTCTTTCGGATGGTACCGCATTAGACTTCACAGATGTTTACCGGAAAGATGAAGATTCTACAGGCTGCCATCTCTTTGTGGTAGAGAAGGTTCATCCTGACCTGTTTGAATACCTTTTGCAGTTTATATACACAGATACTTGTGACTTTTTAACTCATGGCTTCAAACCAAGACTAAATTTAAACAGAAAACCAGAAGGATATCCAAGCACTCCAAACTGTCATTCGAATAAAATGAATTCCCATGAAGATAATCAGAAGTCAGCATTTGAAGCTTACAAAAGTAATCAAGCTCATACAATTAGTGAAAAGCAGAAGAGTAAATCCAAATCTTCCAAAAAAGTAAAAAGTGTTGGGGAAGATGATCCTGTAAAAATGTTGCAAAATGTCGCAAAGAAATTTGGTTTCAGTAATTTAAGTAGTAGGTTAGATGGAGTCAGATATGAAAATGAAGAAATTAGTATCATTGCCAAGAAAACTGGTAGTAAACCAAAGCTAAATCAGAAAAAATGTTCATTTTTATGTGATGTGACCATGAAATCAGTGGATGGAAAGGAATTTCCTTGTCATAAATGTGTTCTTTGTGCTAGACTTGAATATTTTCATAGTATGCTGAGTAGCTCATGGATTGAGGCTTCCAGTTGTGCAGCTCTGGAAATGCCAATACATTCTGACATACTGAAAGTTATTTTGGACTACCTCTATACTGATGAAGCTGTTGTGATAAAAGAATCTCAAAACGTGGATTTTGTTTGTAGTGTTCTTGTGGTGGCTGATCAGCTTCTCATATCTCGATTGAAAGAAATTTGTGAAGTAGCATTAACTGAAAAACTTACCCTTAAGAATGCTGCTATGCTACTGGAATTTGCAGCAATGTATAATGCTGAACAGTTGAAACTCTCTTGTTTACAGTTTATTGGACTGAATATGGCAGCTTTACTTGAAGCAAGATCTCTTGATGTTTTAAGTGATGGTGTTTTGAAGGACCTTTCTGTGTTTTACCGGAAAATGATTCCAGCAATGGAGAGAAGAGTCATTACACCATATCAAGATGGACCAGATATTAGCTATTTGGATGTAGAAGATGGAGATATCTTTTTGAAAGAAGAAGTAAATATGGAACAGAATTACTCGGAAAGTATGGTCAAGAAGACAAAAACAAAAGCAAAAAAGAAGCCACGTAAACGATCAGATAGTTCTGGAGGTTATAATCTTTCAGATATTATTCAGAGTCCACCATCTACAGGATTGTTAAAGTCTGGTAAGACCAATTCTGTGGAGTCTCTTCCAGAACTGTTGACATCAGACTCTGAAGGAAGCTATGCAGGAGTGGGTAGTCCTAGAGATTTACAGTCTCCTGACTTCACAACAGGATTTCATTCAGATAAGTCTGAGGGGAAAATTAAATCGTATGTTAATGGTACACCTCCTGCATATTTTAGGGAAGATTTAAAACCATGGGAAAAATCACCAGTACTTAAAATAACTGCTCCACAGCCCATTCCCAGTAACAGAATTGATACTACAAGCTCTTCCAATTGGGTGTCTGGCTCTTTCAGTCCTGTCAGCCCTCCTGTCATGGATCTCAGAACCATCATGCAAATTGAAGAAAGCAGACAAAAATGTGGAACTACACCAAAGACAAATTTGGGAAAAATGATTTCTCATGGAGTTAAACTTTCTCAGAAGCAACGAAAAATGATTGCATTGACTACCAAAGATAATAATTCAGGAATGAATAACATGGAAACAGCTTTAAGTGCGCCTTCAAAAATCCCCAAGCCAGCGAATGCATGGGCATCTTCTCAACATTCAGTTTCATCCAAGTCATTCCGGGATTTCTTAGTAGAAGAAAAGAAATCTGTTACTGGCCAGAGATCAGGAGATCATGTCAAAAAAGTTTGTTTTAAAGGGATTGAAAATTCCCAGTCTCCAAAAGTTGTAAGAGAGAAAAGGTGATATTTGAACCAATCCTTGAAGAATTAGAAGATCCTTGTAATGGACTGTGCTACAGTGN EMBV3_39117 CGTTATATCCACATCCTCCTGGCTAATTTATATGTGGTCATCCCCCCTGCCCTTAATCCC Gene GeneID:615216|LOC615216:XM_002693187:172_cdna Constitutive 0 NULL GeneID:615216 15 GENE LOC615216 NULL similar to olfactory receptor 672 EMBV3_03255 CAGCTTCAGAATCAAGGCTCAGTGGCTTAAGGAGAACAACTTTGGAGGTGCCATGGTCTG Gene GeneID:282645|CHIA:NM_174699:32_cdna Constitutive 0 NULL GeneID:282645 3 GENE CHIA NULL chitinase, acidic EMBV3_14770 ATCCTCAGCATCCCCGGCTGGAAGTACAGCTCAAACCACACAGAGCACCTGCAGACTCTC Gene GeneID:782761|LOC782761:XM_002688470:26_cdna Constitutive 0 NULL GeneID:782761 6 GENE LOC782761 NULL similar to Epididymis-specific alpha-mannosidase precursor (Mannosidase alpha class 2B member 2) (AMAN) EMBV3_14712 GTCTTTGAGAAAGCACCCAAACAGATGCATTTCCATTTAGGCTCTCTGGGGCCTGGACCA Gene BVT0102_012389 + 0 NULL GK000004.2:96267802-96417189 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182468 TCONS_00182467 1 XLOC_110867 NonCoding TCONS_00182468 XLOC_110867 NonCoding NonCoding - 4:96349221-96350744 - TSS136340 370 1 TCONS_00182468_1 34 2 0.758212877792378 0 0 0 0 0 9.66744422058584e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 3.88718552929269e-05 0.000234804024268255 0 0 0 0 0 4.81120927358785e-09 0 0 0 0 noncoding 0 1 0 0 0.437061698393867 0.154734849302725 0.0176901777350957 0.718779468394722 ACAGACAGAAAATCACCCAGTGCTGTCTGCTTGCCTGTTCTTCTGGGGAAATGGTCCAGTCCACGCTGGTTCTGTGTAGGGCTGTGAGCCCTCCTGGGAAGGCCCAGATGTCTGGGTCTTTGAGAAAGCACCCAAACAGATGCATTTCCATTTAGGCTCTCTGGGGCCTGGACCACTGGTCACTGGGCCCCACTCAGTGGTGGTTGCTGTTCCCTCGCCAGCATGACGGAAGACTGAGGGACAGCGAGAGGCTGAGACACTGGCTGAACGATTACAGGAGAGCAGCCTAAGAAATTCTGGAATATGGAACTGAGTCATTCGGGGCAGAAATCTAAGAATAAGAAAGACTATATTTTTTCATAGTCTCTAC TCONS_00184968 r 3' 66446 TCONS_00184968 r 3' 67968 EMBV3_40885 ATGAATGATGAAGGGGACCTTCTGAAGGAGAAAAGAATAGAAACCTCAGAGTGTGCCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42762 TTGCACATGGGGCACCAAGGTCTCCAGAGCCAATCCTGTTCCTCTCCCTCCATTTCTAAT Gene GeneID:540032|WDR92:NM_001046465:65_cdna Constitutive 1 NULL GeneID:540032 11 GENE WDR92 MGC137951 WD repeat domain 92 EMBV3_00587 ACTCATCCGGCAGATCGGAACACCTGCATTTCTGGATGTGTCATTCCCGTTTGTCGAGGC Gene BVV0102_156966 + 0 NULL GK000012.2:5200844-6212203 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036103 1 XLOC_021079 NonCoding TCONS_00036103 XLOC_021079 NonCoding NonCoding - 12:5201210-5203245 - TSS26351 1924 1 TCONS_00036103_2 58 2 0.0550639134709932 0.000841515764998126 0.000219351620983143 0.000110624647816329 0.000202856783602759 1.79627505201187e-05 1.85917595129863e-06 0.000212171915533721 0 2.05044295152101e-05 0.000207435797944673 1.54674583113785e-05 0.000397711095190837 0.000150622607313636 0.00078725883162735 0.000430949867720122 0.000164729544177435 0 0 0.000130448390120089 2.24265435858953e-05 0.000115970280278833 0 0.000109669009208296 0.000130701482909656 0.000122436775611713 2.56331679147161e-05 0.000137038403129564 6.48998388582692e-05 0.000138775285556019 6.87471072506955e-05 XM_005266357.1 PCDH17 PREDICTED: Homo sapiens protocadherin 17 (PCDH17), transcript 0.0 2185 84.65 0.999480249480249 0 noncoding 0 0 0 0 0.0196297075795127 0.893081816740506 -0.0176723858278649 0.778037071785911 GAGCGGGGACTGCGAGCCCGGCGGATGCGGCAGCGGAGGGCGGCCGGGGGGACGCCGCTCCAACTGTTGAATTTTTACCTTTCCTTTCCATCGGTGCTGTGCCTGCGGACATGGATTTATTTGCTTTGAAATCCGCACGTCTTTCCCAGGCTGTGAGCTGATCCTGTCAGGCACCAGATTGAAAGAGACCACCCGTGACAGAAAAGGAGGAAAAAAAAAAAAAAAAGCCTCCACAACGGACTGCACAATTAACTACGCACACCAGTCCTGGACTTTGTGAATAGAAAACACTGACAGGAAAATCGTGAACTGTGATGCGGAGCTAAGCTGTGAACAGTCTCTCTAATCCAGATTTTTTTTTTTCTCTTTTTTTCTCACCCAAGATTGAAAGATTTGGGGGTTCCTTTACGCCTTTATTTTTAAAATAAAAACACCTAGCAAAACAGACGCCTTGCTTTCCAGAGCCTCGGACTCCGGCAGAAAGAGAGTGAGTCAGAGAAAGCGTTAGGAAGAAGCCACAACTAATGTCTGTGAAGGGAGGACCATGAGGCGAGAGTGAATTCGATTCGTTCCGCTGTTTCTGACTCATCCGGCAGATCGGAACACCTGCATTTCTGGATGTGTCATTCCCGTTTGTCGAGGCGCCTCGAGAATCCGAGATAATGTGTAGACAGACCCGTGCCTAGCATCCCCTGGGCGGTAGCTCCCCGGGGCGGGTGCCCCGGCTGGACCGCCGCGGCGGCAGCTCTTAGTCCGCTGCCCTCGCGACTCGCCCAGAGAGACTGCGAGAGCGAGACTGCAGAATGCATCACGCCAAACCTTGATGTGTTCCTTTCATCCAACCCACTCCTACTATAGGAAAAAAAAAAAATTGAAGAAAAAAGAAAAAGCCCGCACTTTATTCGCTTCAAATATTCACCACTTTTATTCCTCGCCAAGGTTTTCCTTTCTAGATGAAGAGGACTGGGAGGCAGGGCCATTGGAAGGAGATGCTGAATAGAAAGAAAAGAGAGGCACTTGACAGCCCAACCCTCTGAATGCAGAGACTGTTTCCCTTCTAGCGAGAGACAGGGAGAGTGTGTGTGCGAGGACTGGGAGGGTGGCTCCCCCTTCCTTTTTATTCCGCCTCTCCCTCCCCCTTCAAATCTGCACATCCAACCATGAGTTGCCTGTTGATTTCCTTTCGCCTGGGAAGAAAAGCAAACTGGAATTAAACTGCAGGGAGAGAAGTCCTTGCTCGCGGGCAGAGAATGGGATGGTAGCGGCGGCTACTGGCTCAGCGTAAGAAATCAGAGTGCGTTCTACCAACAGAGGCGGAGATACATCTCTACATTTTCCTCCTCCCAACAGACTCCAACCGCAAACGCAGATCAGGCTGTGGCTTCCTCGACTTTGGGGAGAGCCTTTTCCGAGGAAGAGAGGGAGGAGCCTCGTGGAGGGAGGAAACTACAAATCCGGACACTAGTTCTTTGCGCTGCATTTCCTCCCCTCCCTTCGGCTGTTCGGAACGGAGAGAAGGAGGAAAAAAAATAATAATAATAAAGAAACACCCTTGGCTTGGAGATGCAGTCTGCCGCCACCGCTGCCTCAGCCGCCAATGCGAGATTAGATCTCTAAATGCAGCAAAACACTGCCTGAAAACCCCCGCGAAGCAAGCAGACATTTCACAAGGCTTCGGGGAAGCTTCAATATATCTGACTCTCTCTCTCTTCGTTGTTCCTCATTCCCATCAATTTCATCACTGAAGAAGAGAAACAAGTAAGGATTTCACTTTCTGATCTGCCTAGAGACACACCTCCCAGCTCCCTCCCCCACCCGATGTGAAGAGTATTCCGGAGGCAAAAAGCTGGAGTGGATTTGCAGCGCCCTAGCGGGAGTGAGGAAAACCTACGGATTCTTCAGCTCATTACCATCCTCCCCAGAC TCONS_00036102 s 5' 61 TCONS_00036102 s 5' 1498 EMBV3_11474 ACCTGAATTCTGCTGGCTACCAACCCACGTCTTCTGGAGGCTCTGTGATTCCTCACCTGG Gene GeneID:530951|CCR9:NM_001098068:137_cdna Constitutive 0 NULL GeneID:530951 22 GENE CCR9 NULL chemokine (C-C motif) receptor 9 EMBV3_28425 CACACCTCTTCTGTCTGCCGTCTATGAAGGTCATGTTTCCTGCGTGAAATTGCTTCTGTC Gene GeneID:541099|MTPN:NM_203362:32_cdna UTR3_Alt 2 NULL GeneID:541099 4 GENE MTPN MGC127565 myotrophin EMBV3_13480 CGTAAACCACACCTGGAAGAGAATAGAGTTTGGTCTCAGGTTTATTTGTAGTACCAGCAG Gene GeneID:504257|SCOC:XM_002694339:76_cdna UTR3_Alt 1 NULL GeneID:504257 17 GENE SCOC NULL short coiled-coil protein EMBV3_40101 ATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGATCCACTTCCGCTGGAACT Gene GeneID:538880|CPEB2:XM_002688461:25_cdna Constitutive 0 NULL GeneID:538880 6 GENE CPEB2 NULL cytoplasmic polyadenylation element binding protein 2 EMBV3_19659 TCCCCCTTCGGATGGAAGCGAGACCTGGGATGAGGCTGACACTAAAATCAGGGAGTATTA Gene GeneID:100297900|LOC100297900:XM_002699054:53_cdna Constitutive 0 NULL GeneID:100297900 29 GENE LOC100297900 NULL hypothetical protein LOC100297900 EMBV3_08305 AGTACAAGGACAGCGCTTGGATCTTCCTGGATACGGGGAGATTGTTAACATTAATCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27796 AGTCTTAGGGAATACTGTCCAAGTCCTTTTCCTTGCACTGAGCACAAGCATAGAAGCAGG Gene BVV0102_118935 - 1 EMBV3_31616 GK000014.2:34830957-35495615 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04040 CACTTGTTAGTACAAGTCATCCTCCATACCCATGTTTATCACTCTCTTGAGAAAATAAGC Gene GeneID:539571|ESM1:NM_001098101:1_cdna Constitutive 2 NULL GeneID:539571 20 GENE ESM1 NULL endothelial cell-specific molecule 1 EMBV3_35067 TTCATGGTTGTCCATGTGAATTTGGCGGAGGAGCTTCCCATTGTGTGCATGTGTGTGCAC Gene GeneID:100335678|LOC100335678:XM_002699384:357_cdna Constitutive 0 NULL GeneID:100335678 29 GENE LOC100335678 NULL hypothetical protein LOC100335678 EMBV3_13038 TACTGCTTTGGTATTTTGGTAAAAACCTGTAGCAACTTGTTACACTGGGGTGAGAAAGAG Gene GeneID:616647|MCFD2:XM_002691308:429_cdna Constitutive 2 NULL GeneID:616647 11 GENE MCFD2 MGC128641 multiple coagulation factor deficiency 2 EMBV3_24567 TAGACCGAAAGTCTACAGAGATCTTCCATGCCCACATCCAGGCCAGTCAAGGTATCATGC Gene GeneID:534118|FIG4:NM_001076014:50_cdna Constitutive 1 NULL GeneID:534118 9 GENE FIG4 SAC3 FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae) EMBV3_39036 CAGTCTGGTTGGCGTGGAGGGCGGCCACTCCATCTTCAGCCACTCCTCGGCATACAGCGT Variant GeneID:514685|DPEP1:NM_001034472:237_cdna 479^736 1 EMBV3_18792 GeneID:514685 18 GENE DPEP1 MGC126924 dipeptidase 1 (renal) EMBV3_40370 GAGATGCTGGACACGGTTTTGGAAGCCCTGGATGAGATGGGTGACCTCCTGAATCTGAAA Gene GeneID:100336940|LOC100336940:XM_002692040:50_cdna Constitutive 1 NULL GeneID:100336940 13 GENE LOC100336940 NULL serine palmitoyltransferase, long chain base subunit 2-like EMBV3_39171 TGCCTCTGAATCCTGGCTGCGTGGAAGTATCTTTGATGATGTTGACTCCTCCCCCAGTGA Gene GeneID:613491|TMEM71:XM_002692608:43_cdna Constitutive 0 NULL GeneID:613491 14 GENE TMEM71 NULL transmembrane protein 71 EMBV3_07639 GCAGTACATCACATGATTTTGACCCCACAGGTCTTGTTCAGCGTTGTGTGATCATCCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28093 TCAGGAACTGCTCTGCCCACCCCCACGACCTTGGACCTTAAGAACCACCTTCCCCAGAGT Gene GeneID:505094|PRODH:NM_001075185:34_cdna Constitutive 0 NULL GeneID:505094 17 GENE PRODH MGC140683 proline dehydrogenase (oxidase) 1 EMBV3_30518 TACTTGTGTTGCACGGGCTTAATTGCTCCGAGGCATGTGGTGTCCACTCAGACCAGGGAT Gene BVV0102_024689 - 0 NULL GK000018.2:60014257-60068968 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091469 TCONS_00091465 2 XLOC_056244 XLOC_056240 Coding TCONS_00091469 XLOC_056244 Coding Coding - 18:60066393-60067247 - TSS68815 854 1 TCONS_00091469_1 86 0.847775175644028 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.18031580227668e-07 0 0.000742248247978099 0 0.000146902265670141 0 0 0 0.00146728614775715 0.000193364059056712 1.96307198846315e-05 0 0 0 0 0 0 XR_231886.1 LOC101908184 PREDICTED: Bos taurus uncharacterized LOC101908184 (LOC101908184), 3e-127 459 91.19 0.382903981264637 0 coding GATGTTTTTCTGGAACTCTCTTGCTTTTTCGATGATCCAGTGGATATTGGCAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAAACCAGCTTGAACATCTGGAAGTTCACAGTTCACGTATTGCTGAAGCCTGGCTTGGAGAAGCCAGGATCTCCTTGCAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTGAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCCAAGAGGTGACTTATTGGAAAAAACCCTGATGCTGGGAGAGATTGGGGCCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGATGGATGGCATCACCGAGTCGATGCACATGAGTTTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCATGCCGTGCTGCAATTCATGGGGTCGCAAGGAGGCTGACACGAATGAGCGACAGAACTAATTGAACTGACAAGCTAGAACGTGAAACACACAACTCTTAGAAAGGGCTACTTCATACTAACATTTCCAAGGAGAAAAATGTCTTTGTATTAATATACATAGTGCACAGTTAAAAGATAATGAGTAGAACTTTACTGGTGGTCTAGTGGTAAATAATCTACCTGCCAATGCATAGGACCCAGGTTTGATCCCTGGTCTGAGAGGACACCACATGCCTCGGAGCAATTAAGCCCGTGCAACACAAGTACTGAGCCTGTGCTCTAAAGCCTGTGTTCTGCAACAACAGTAACCCCAGTACTGTTGTACACCAGTAACCCCAGCCTGTACACAAGTAACTGGAAAGTCACTTCTGCTTGCTGCAACTAGAGAAATCCCACGTAC TCONS_00087327 TCONS_00087328 . 3' 228 TCONS_00087327 TCONS_00087328 . 3' 1081 EMBV3_29920 GTTATAGCACAGCCTTTGACAGAGTGGTTGTCTGTTTGTGTGTACCCCTTCCCCATCACC Gene GeneID:540699|TRPM3:NM_001076236:4_cdna Constitutive 0 NULL GeneID:540699 8 GENE TRPM3 NULL transient receptor potential cation channel, subfamily M, member 3 EMBV3_27452 ACCATCTTCAACCTGGTGGAGGTGGTGCTGCAGGCAGAGGCCACCGCCCTCAAGTACAGT Gene GeneID:519222|DIS3L2:XM_002685599:216_cdna Constitutive 0 NULL GeneID:519222 2 GENE DIS3L2 NULL DIS3 mitotic control homolog (S. cerevisiae)-like 2 EMBV3_05394 ACACTCTCAAGGTGTCACAGAGCCAGGAAGACTCTCAGATGAGACCAGAGGACTGGCCTA Gene GeneID:523424|LOC523424:XM_002696082:33_cdna Constitutive 0 NULL GeneID:523424 19 GENE LOC523424 NULL similar to Pleckstrin homology domain-containing family M member 1 (162 kDa adapter protein) (AP162) EMBV3_12481 TTCAGAGAACCAGGCAACCCAGAAAGCCAGGATCTAAAACGATTCCTGTATAAAAAATTA Variant GeneID:533155|MAPKSP1:NM_001075982:11_cdna 66^111 2 EMBV3_39690 GeneID:533155 6 GENE MAPKSP1 MAP2K1IP1 MGC139753 MAPK scaffold protein 1 EMBV3_33463 GCGACTTGAATAGAATTAAACCTTCACGAAACACAGAAACACTAGAATTACTACTGAAAG Gene GeneID:511412|MTPAP:XM_002692146:137_cdna Constitutive 2 NULL GeneID:511412 13 GENE MTPAP PAPD1 mitochondrial poly(A) polymerase EMBV3_10947 GCAGCTCAGTGGCTTCATAAACTGTACCAGGAGAAGGATGCGCTGCAGGAGATATATAAC Gene GeneID:506607|AGPAT3:NM_001038046:15_cdna Constitutive 0 NULL GeneID:506607 1 GENE AGPAT3 MGC133569 1-acylglycerol-3-phosphate O-acyltransferase 3 EMBV3_35228 GCCTTGGCAGGTGGCTTCTTTACCACTGAGCTACTTGGGAGGCCTTAAAGCTAAAATGTG Gene BVV0101_015510 + 0 NULL GK000012.2:30881790-31004651 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24224 CAGGATGCCTGGAGAGAAAAGAGAGCCTGGAGAAATCACTACTCACCGACACTACAGTTG Gene GeneID:614367|IL23R:NM_001127172:64_cdna Constitutive 0 NULL GeneID:614367 3 GENE IL23R IL-23R interleukin 23 receptor EMBV3_12203 CCGTCCTGTGGGACAACCAGCGTATGCTAATGTTGCAAATCCGTGATAATGTATGTAGAC Gene GeneID:614198|NFKBID:XM_002694942:55_cdna Constitutive 0 NULL GeneID:614198 18 GENE NFKBID NULL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta EMBV3_02133 AATCACGACTCGACGCACGTCATCAGGTTTCCGCTGAATGGCTACTGTCACCTCAACTCA Gene GeneID:784587|KCTD1:NM_001080360:16_cdna UTR3_Alt 2 NULL GeneID:784587 24 GENE KCTD1 MGC137856 potassium channel tetramerisation domain containing 1 EMBV3_01141 TTTTGATCCGAACATCAACCCAACAATAGGTTTCGTGCCTTAGCGCCAATGTACTACCGA Variant GeneID:617385|RAB22A:NM_001099165:1318_cdna 373^454 1 EMBV3_41520 GeneID:617385 13 GENE RAB22A MGC140196 RAB22A, member RAS oncogene family EMBV3_29562 GTTAGCCATCATTCTTGCACTAAGCACCAGAAGACTTGAAAAATCTAAAAAACAAAAAAA Gene GeneID:511387|KLHL20:NM_001076835:94_cdna Constitutive 3 NULL GeneID:511387 16 GENE KLHL20 MGC142776 kelch-like 20 (Drosophila) EMBV3_12813 AGCTCTCATTTGGACCCCACCTGCACCCAGTCACCCCTCTACTTTCAGACTTGGATGAAA Gene BVT0102_128247 + 1 EMBV3_17286 GK000002.2:127202532-127247554 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112431 1 XLOC_068326 NonCoding TCONS_00112431 XLOC_068326 NonCoding NonCoding - 2:127241252-127241818 - TSS84052 566 1 TCONS_00112431_1 37 0.53356890459364 1 0 0 0 0.000196197859182992 0 0.000418701325313761 1.26397439284069e-05 0 0 0.000153341793194597 1.45388793780849e-05 0 6.31746283608118e-06 0 8.31094612432893e-06 0 0 0 0 0 0.00143574620183816 1.60904357174512e-05 1.31107326086914e-05 0 0 2.44821887050053e-05 3.734338147586e-05 0 0 8.57704314585516e-06 0 0 noncoding 0 0 0 0 -0.0240518954550638 0.83558699389223 0.00730581694099111 0.912142987900022 GGCGTTCACTAGCACAGCTCCCTCACCATTCATCTCCCGTCCCCCATGTTTCTAGGGAGCGAATGTCTCCACAGTTCTGGACCAAATCAACCAGCCGCTGGGCTGCCTTTTAGGAAGTCAGATCTCGTGGCCCAAGAGTGGTCTTTCATCCAAGTCTGAAAGTAGAGGGGTGACTGGGTGCAGGTGGGGTCCAAATGAGAGCTGCAGAGGCTGCTGAGGAGTCTGAGGGATCTCATAGAGTCTGTGTCCTCTGTAGTTAGGACACTGCAAACTGGTTGGGTCCAAAACAGATTTTTCAAATTGGACCAAAAGAATTTATTGATGGACTGATCGTGAATGGAGTGATGGACGGGCAAAGAGAGAAATCAAGGTTTTGGTGGATGATGGTCCTGTTTACTTAGATGGGGAAAGCTTGAGGGAAAGATTCTTTGTTATAAAAATTAATAAATTTTTGTTAGATTGGTGAAGTCTATTAAGTGCCCTAAGTCTGGATTTGAGGGGAGAAGTTCTGCTTGGAGATAGAAATTTGAGTCACTGTCATGTAGACGGTGGGCTTCCCAGGTGAC TCONS_00106680 TCONS_00106681 TCONS_00106682 TCONS_00106683 TCONS_00106684 . 3' 9947 TCONS_00106680 TCONS_00106681 TCONS_00106682 TCONS_00106683 TCONS_00106684 . 3' 10512 EMBV3_23473 TCGCGTATTGGACCCTTTCACCATCAAGCCCCTGGATAAGAAGCTCATTCTTGACAGTGC Gene GeneID:445425|TKT:NM_001003906:76_cdna Constitutive 1 NULL GeneID:445425 22 GENE TKT NULL transketolase EMBV3_42326 GTGCTTTCTAGAGGAATGACTTTCCTTTGTCCTACACAAAATCAAAATATATGAGTCTCC Gene GeneID:535588|ABHD5:NM_001076063:167_cdna Constitutive 2 NULL GeneID:535588 22 GENE ABHD5 MGC142582 abhydrolase domain containing 5 EMBV3_09635 CTCCAGGACGCGTCTGGCACTGATGGGAAGGTGGCAGTGAACCTGGCCAAGCTGAAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34833 GTGACCTTAAGCAGACTCTTTCCAGGCAACACTGAAGCTTTTCTAAGGGGGTTTTGCATC Gene GeneID:616994|LRRFIP1:NM_001102308:17_cdna Constitutive 2 NULL GeneID:616994 3 GENE LRRFIP1 MGC151609 leucine rich repeat (in FLII) interacting protein 1 EMBV3_20387 GTCCGGTTGTCATCATGGCCCGTGGAAATCAACGAGAACTTGCCCGCCAGAAAAACATGA Gene GeneID:526395|SERF1A:NM_001113301:87_cdna Constitutive 0 NULL GeneID:526395 20 GENE SERF1A MGC133508 SERF1 SERF1B small EDRK-rich factor 1A (telomeric) EMBV3_06585 GGTGCCAAGCTGTTTCTTGCAAAACCCATAACCCCATCGTCCCTTGGAAGTACATTCATG Gene GeneID:100299044|LOC100299044:XM_002691298:402_cdna Constitutive 0 NULL GeneID:100299044 11 GENE LOC100299044 NULL similar to pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 EMBV3_27045 CCACGATGGCGTGGATTTCGCCTGACGCAAACACACTTTTGAGATACTTTCTCTCTTGCA Gene GeneID:540667|MARCH8:NM_001076232:35_cdna Constitutive 1 NULL GeneID:540667 28 GENE MARCH8 MGC138116 c-MIR membrane-associated ring finger (C3HC4) 8 EMBV3_14400 ACTGACATTGGTGAGCAGCCACTGAAAAACAATGTCTTTGTTTTTTAACAAAGTTCTTTG Gene GeneID:516689|GPM6B:NM_001104981:32_cdna Constitutive 2 NULL GeneID:516689 X GENE GPM6B M6b MGC179319 glycoprotein M6B EMBV3_43399 GTACTTTATCTGAAGGACTTTACCAGGACTCAGCTCCCCCCATGCCTCCCAGTCCAGGAA Gene GeneID:444863|GYPC:NM_001002886:2_cdna Constitutive 1 NULL GeneID:444863 2 GENE GYPC GPC glycophorin C (Gerbich blood group) EMBV3_43353 CTTGGGGTAGCAATTCAACAACTCTCACCTATGAACATGATAAGTTTTCCATTCCCTGGG Gene GeneID:782819|ZNF35:XM_002696879:316_cdna Constitutive 0 NULL GeneID:782819 22 GENE ZNF35 NULL zinc finger protein 35 EMBV3_17784 AACTTGTTCTCTGGTCACACGATGCGTTCTAGGCTACTTCGTGACTTACTGGCTCTTGGG Gene GeneID:519213|PIGV:XM_002685695:361_cdna Constitutive 0 NULL GeneID:519213 2 GENE PIGV NULL phosphatidylinositol glycan anchor biosynthesis, class V EMBV3_27486 GAAGAGTCCGGAGGAGATGTACATTCAGCAGAAGGTCCGAGTGCTGCTCATGCTGAGGAA Gene GeneID:614630|CTNNBIP1:NM_001037142:97_cdna Constitutive 0 NULL GeneID:614630 16 GENE CTNNBIP1 NULL catenin, beta interacting protein 1 EMBV3_31351 ATGCCCAGTACAAGGAGCTGCAGAAATATGCCTGCGTGTCATCTCGGAATACCAGAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32873 CTTGCATTCGGCTGCAAGGTGTACTGTACGTACACAGGTGCTGGTCGATGTCCACTTTCT Gene GeneID:614851|WSB1:XM_002695638:63_cdna Constitutive 0 NULL GeneID:614851 19 GENE WSB1 NULL WD repeat and SOCS box-containing 1 EMBV3_39874 CAGTGTCTTTGTTCTTGTTCTGACGCTGGGCGCATTCAGGAGCAGCATTAACAAGCGCGT Gene BVV0101_015146 + 0 NULL GK000022.2:60024587-60039909 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35043 AGAAGCCGCAGCGAGCTGGAGCCGCCGGAGTAATGGAGGGGAAAATTCCAGTCGCAGCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21730 GACCTCTCCTCGGAAATGTTCAACGAATTTCATGAAGTCCTTATGAGCTTGATTCTTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11915 AGCTAGTGAGGAACCTGGAGTGTGGACAGAGGTGAGAATTGGAGAGATCTACCTGAGGCT Gene BVT0102_130151 + 0 NULL GK000030.2:32520434-32544031 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08641 TGGAACAGATTCTAAGTCACCGACTGAAAGGTCAAGTAACCTGGTTTGGTTACGGAAGTC Variant GeneID:525116|RUNDC3B:NM_001076874:26_cdna 393^443 4 EMBV3_26027 GeneID:525116 4 GENE RUNDC3B MGC139450 RUN domain containing 3B EMBV3_35777 GAGAGGGCTGTCGGCACTGGGCACTGACAGGACACGGGTGTCTGGTGGACGCAGACGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19584 AACGAGGAAGACATTGGTGCAGGAGACCAGGTGACTGTGCAGTATATGCAGGATCGAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25326 GGGGGAAGTGAGAAAAAACTTATCCAAGAGAAAGGATCGCAAAGCAGCCAAGACCCTGGG Gene GeneID:785678|LOC785678:XM_002690231:25_cdna Constitutive 0 NULL GeneID:785678 9 GENE LOC785678 NULL similar to trace amine associated receptor 3 EMBV3_10355 GAGCGGCTGTGGCTGCGTCAGTGACTCTGTTTACAGAAACATGTGAGAAGAAGAATTTGG Gene GeneID:782247|ARHGEF3:XM_002697002:390_cdna Constitutive 2 NULL GeneID:782247 22 GENE ARHGEF3 NULL Rho guanine nucleotide exchange factor (GEF) 3 EMBV3_04518 CTATCAGGACCAGACCTACCAGCCCGTCTACTTCGTGTCTGAGAGCTTCAGCGATGCCAA Gene GeneID:280707|TH:NM_173884:203_cdna Constitutive 0 NULL GeneID:280707 29 GENE TH NULL tyrosine hydroxylase EMBV3_06653 GGACGACGGCCTATGTCCAGCAAGCTGTCAAAGGAGACAAGCTTCTTGAAGGGCAAGTGA Variant GeneID:100300346|LOC100300346:XM_002697199:27_cdna 244^352 1 EMBV3_03073 GeneID:100300346 23 GENE LOC100300346 NULL similar to zinc finger protein 76 (expressed in testis) EMBV3_32034 AGCAGTGATGATGGCACTCAAGGCTGTATGGGGTTGCCGTGTGTGGTGATGTAACAAGAT Gene GeneID:506322|NRAS:NM_001097989:26_cdna UTR3_Alt 2 NULL GeneID:506322 3 GENE NRAS MGC148418 neuroblastoma RAS viral (v-ras) oncogene homolog EMBV3_28867 CCACTTCACAACCAGTAATTGTCAGCAGAAAAGACACAAGGCATCAAAGCTACTAGTGAC Gene BVT0102_141703 - 0 NULL GK000009.2:19554837-19730466 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00239159 1 XLOC_145825 NonCoding TCONS_00239159 XLOC_145825 NonCoding NonCoding - 9:19559488-19563441 - TSS178837 3953 3 TCONS_00239159_6 100 0.333417657475335 1 0 1.03255849209693e-05 0 3.74561767127161e-05 1.90973959458665e-07 6.99424093211681e-05 0 1.91783645318168e-05 1.49626656583432e-06 9.03184058472311e-05 0 4.05372296840849e-06 0 1.01618826203389e-05 0 9.92903757243231e-06 0.00110911213054384 0.00289794339743908 0.000914013697364844 7.25619643795435e-06 0 3.45579779926372e-05 0.000199924483177988 0.000287775880256818 0.000373206870682837 1.22689838620223e-05 5.34692062463036e-06 5.92881823895784e-06 2.42984043392424e-05 3.68424670013086e-05 4.71488559962488e-05 NM_001083750.1 POLR3A Bos taurus polymerase (RNA) III (DNA directed) polypeptide A, 155kDa (POLR3A), mRNA. 2e-54 219 84.73 0.0508474576271186 0 noncoding 0 0 0 0 TTCTCATTTGGTTTTTCTGTCCCTCTAGCTTGAACCACTCAAGGCAGAGGTTCTTTTTTTTTCTGGAACTAAAGAGTAATGTGTGTGTCTTGTAACATGGGACATCTCTCTGTGTCCAGCCTGTCCCTTTACTATCATATCATGTTGGTGTCCCCTGTTGAATCAGTTCACGCCTGTGAACTAAGTCATGGTGGCATTTGTGTGTTTTTTTTTAAAAAGGAGGGAATTTAATGAATCACAGATCCCATCTATAATCTGCAGAACAGGGATGAATATTAATAGGATTTTCGTCCTAGATTTCCTAAAATGTTCTCTGTATCTGTAAAACTTGAGCTCAGAAGAATGTATGGATCATCTGCTTTTTAGAAGTTTCATTCTGATCTCACTGCCAAAGATTAAAACAAATGTGAGTATTAAGGGAGAATAGCTTCCTTTTCATGCCCAGAATTTTTAGCCTTTTTCATCGTTGTTATTACTGTCTTAGCAAAATAGTTTGGGAGAAAACATGTATTATTTTTGTCGTGAAAATAATCGATGGTAACAGTACTTACTAAGTGCAAGAATGTTTCTCCAGATTATTTCGTTTAGGACCCTTCTCTGAAATAAGAGAGAGACTGTAATATAGCCCTTGCCAGCCCAGAGATGCCAGCCATCTGTGTTGCTGCTCTGGGGCTCTTGGTTTCTCAGTCTAATGAGCTACCACACTTCGACAGGATTTAGTCTCTGGGCTCCCCTGGTGGTGAAGTGTTAAAGAACCCACCCGGCAATGCAGGAGTTGCAAGAGACGCAGGATCGATCCCTGGGTCGGGAAGATCCCCTGGAGGAGGAAATGGCAACCCACTCCAATGTTCTTACCTGGGAAGAGCAGTGGAGCCTGGTGGGCTGCAGTCCGTGGGGTCACAAAGAGTCGCACACGACTGAGGCACTGAGCACTAATGGGTGGAACAACTTGTCTGAGATAAATGATAGACACATTTTTCATGCTGATTTTATTTAGCTTATTGGTACTATTGTCCCATCTGTTCAGTTGAGATCATATTTTTCTCTTAATTTTCTCCCTGTCAATCCATTTCATGTTGTATGTTAATAGTACCACGAGGTTGAAATAAAGATCCTGGGCTCCAGGACAGCCCACAGTTAGGCTCAGAGAGCACTCTGAGCTCAACAGCTGGGGCAGGAAGACCAGCATTTCGGCACTGACCCTCTTCCCCTTGCCCAGACTTGTCTTTTTCTCTCTCCCTGCCTGTCTTCATGGTAAACCACTCAAACCATCCGCTCCTAGCCACATCCTAAACAACAAGTACAGGAACAGAAGTGATGACAACAGCAATATTTTTACTCCCCAGATTGGCAACCAGAAGGAGGGACTCAGACAGCTGCTTCCTTTCCTGTACTGTTTTACATGCCTAAGAAATATTTATTCTACTATGTCCCAGTTGTAAATGAGAAATCAGATATGACAGGATCTCCATCCTAGTCGAAAAATAACTGGGCACAGACAATGTTATCGGTTACGTATTCACCAGGTAAAATGACTGTAGCATTCAGACTGGTGGGTAGTTTCTGAATAATGACTGCAAGCAACCTCTTTCCTGTGCATGCATGCTCAGTCATGTCCGACTCTTTGCAACCCCATAGGCTGTACCCCGCCAGGCTCCTCTGTCCGTGGGATTTCTCTAGCCAAGAATACTGGAGTGGGTTGCCATGCCCTCCAGTGGGTGTTCCTGACCCAGAGATCAAACCCACATCTCCTGCGTCTCCTGCATTGCAGAAAGATTCTTTACCACTGAGCTACCAGGGAAGCCCAACCTTTTCCCTATCATGGACTCACTCAGTGAGCAGGTTGCCTCTTAGTAAGACCATTTCAGAGTGACCCAGTTCTCTAGAGACAGCTTTACTCAAGTCACAAAGTGTAAACAGTTACATCTGCAGTGAGGATAAGCAGCTATTGCTGCAGTCAGGGTAGTGCAGGCAGAATAATAAATGAATGAGGGGAATTTCAGTGGTACCAGTGTCTGTCTTCCTAAATACAGGTCATTTCAACAGAGAACGGATTTTGTTTTCTCCAGTGTTCCTGAAAATCGTGTATTAGTCATTCTCATTGCAAATAGCCCTTTGCATGCGTGCTAAGTTGCTTCAGTCGTGTCTGACTCTTTGTGACCCTATGGACTGTAGCCTGCCGGGCTCCTCTGTTTCTTTTTCCTGGTAAACATCTGAGAAAGGACAGAATATGCCCTATCCTATTTCAGAAGTGGCATAATCACCAGTCAAACTCAAACATGATGTTATTAAACCAGATCCATATCATTTATATTATCATGTGGAGTTTGTTGATACCTACATTGGTACCTGTACAGATATTTACATTTATATGATATAGTGCTCTTTGTACCCGCTTCCCTGGTGGCTCAGCAGTAAAGAATGTGCCTGCAGTGCAGGAGATGTGGGTTTGATCCATGGGTTGGGAAGATACCCTGGAAGAGAAAGTGGCAACCCACTCCTATATTCTTGCCTGGAAAACCCTTGGACTGAGGAGCCTGGTGGGCTATGGTCCATAGGGTCACAGAGAATCGGACACGATTGAGCACAGCACAGCACAGTGCTCTTTGTACCTTATCTGGGAGCATAAATGTATACTTTTTAGTATCTCAAAAGCTTTTTTTCATTTTTTTTTATCTTATATTATTTGGCATGGGTCAGCTTTGTATTAAGAGAGTGGAATTACATATATATCCTCTTTTTTACTTGTATACAGTAAATTTGTTATGTAATAGTTTACAGTGAAATACATGGCTTATTAGCATGTGTTAATGGTGTATTGGATAATTAAATGTATGACCAGGTACTGAAAAGTTGAATTGTTTTCTTACTGTGTCACTAGTAGCTTTGATGCCTTGTGTCTTTTCTGCTGACAATTACTGGTTGTGAAGTGGGAAATGTGTTGTATCAGACTGTGACCAATCAGAAGATACACACCACTCGGTGATTAAACAAGGGAAGTTAAATGTCGAGAATTATTACACTTTGATGAAAGGGTGACTCTCAGATATGAGAAAACTGCATTTTACCCTGTGGCTGAGGGAGAGCGTCTAAGGAAGGACAAACTTGGGAGGAAGGGAGGTTGGGCTTCAGAGTTTGTTGGAAAAGTATTTACAGTTGGCAGGTTGGCGGAGAAGTTAACAGGTTTCCCTGGGCAGGACTGGCCTACGGTTGCTTGGCAACAGGAAGCAAACACCTCCTCCTGCATGGGGCTGGGGCGGGTGGTGGGAGCACAAAGTGAGCATGGCCAGGCCAGAGCTGCAAGTTCCCGGAGACACCTCATGTTCTAGGACCCGGAGCTAAAGCAGCGCCATCAGAACCCACCCACTGACCCACCGTGTTGCAGCCTCACAGGAGCACCTCCTTCCTCCTACATCGTCCCTCCGGCACCTTCTGTCTGAACAAGTGGAACAGCGTGCTCACTGTGATGGGAAGATGCTCACAGGAGTTCTGTCCATCCTTACAGAACATGTGTTGGCAGGTGAATTTGGAGCTAAGACACAATACGGTGATAGCTGGCACATATCATAAAAGGATTCTCTTTGTCATAACTTCTCATCTGGAATTACACATGTTCATTAAGAACAAAGGATGATCCGTGTTTTGTGAAGTAACCTGGTAATTTAAGTGAAAATCTGCATCCCAAGCAGTACTTGAGGCCTGGCTGTCAAATTTGGAAAGCTGGCCACTCAGTTGCTAACTAAGCTGGTGAGCGTCTTGTCAAAAGCACAAATGTTACAGGAGGATGTGAAGCTCAGGATGTAAACCTGATTTCCAGTCATCCTTACTTTGTGGTTCTCAGTTTTATAAAGCTGTTTAAATTTAATTTAAAGGAAAAAAAAAAAACATGATGCTGAGAAATATATTTAAAGTTTCTAGAAGTGACTCCTCAAGTAATCAGTTCTTTAGAGGAT TCONS_00234838 TCONS_00234836 . 3' 4608 TCONS_00234838 TCONS_00234836 . 3' 8560 EMBV3_27757 CTGGAAAACGTAGGGAGCAGATTGGAAGTGAAGGAACTTTCCAAAGAGATGATGCTCCTG Gene GeneID:511650|AGGF1:XM_002690418:107_cdna UTR3_Alt 2 NULL GeneID:511650 10 GENE AGGF1 MGC157060 VG5Q angiogenic factor with G patch and FHA domains 1 EMBV3_25055 GTGGAGGGAAGGAAGCATATGGAATAAAGAGCCTTGCACTGTCCTCAGCCAAAAACTGTC Gene BVT0102_038897 + 0 NULL GK000002.2:39912917-39999716 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105111 TCONS_00105113 1 XLOC_062506 Coding TCONS_00105113 XLOC_062506 Coding Coding - 2:39954618-39994504 - TSS77660 657 1 TCONS_00105113_1 114 0.155251141552511 5 0.983653002381848 0.000186376462994657 0 0.000212653261548221 0 0 9.78459088914098e-06 7.10096817822501e-05 4.32671734361082e-05 0.000321929549440804 0 0 0 0 0 1.45571471611483e-08 0 0 1.04322334394909e-09 0.00118969684351345 6.567453898483e-05 1.3519164016778e-10 0 1.39627300758123e-05 0 0.000221424645985871 6.54149269682438e-06 0.000132082227161482 0 0 9.15047921900444e-06 0 coding 0 0 1 1 0.210020261982921 0.239079540324001 0.00364662068224295 0.936357373252049 GAGAAAGGAAGGGGAGAGAAGGAAAGGAAAAAACCCAGAACTTTCTGTACTACCAATTGGAAATGCCATAATCCTAAATTCTCAGGGAAAAGGGTTTCCGGACAGAACTAAATATCCTGAAGGACCTTCAGAGGGGGCTAGTGTTTCCCTGAAAGTAGGAAGAGGATACCCACAGGCACATAGAAGGGGAGAGAGAAACAGCGTGATGGATGTCTCCTGAGGAAGAGACAAGGAGCTGGGAGCTGATACTGGAGGAGTTGTGGAAGTACGGAATCCAGGCACTTCAGCATGAAAAGATGAAAACTGCCACAAATGCAGCAATGCTACAATGCCACAAAACTGCTAGCAATGCAGCTGACACAGAGAAAATGGATCCAAGAGATGGAGGGGAATTGGGAGTTCAAGACTTGAGCCTGGATCAAGCTGTTCCTGAAGCTCATGAGACCTATCAGATTCTCATCTGTTCTGTGTGGAGGGAAGGAAGCATATGGAATAAAGAGCCTTGCACTGTCCTCAGCCAAAAACTGTCTAAGGAGATCTGGTATGGAGTTTGACTTGTGCGAATGGCCTATAACACCCTTTCTGAAACTGACCATTGAGTTTCCAGAAGTATGGGCTTTCTGTAACATCTTTTCTCCCTTAAATGTCATCTTAAAT TCONS_00105109 s 5' 41619 TCONS_00102316 TCONS_00102317 TCONS_00102318 TCONS_00102319 TCONS_00102320 r 5' 5213 EMBV3_32080 AGGCAACAGGCACATCTCTGACTGAACGGCTGAAGCACCTAGAAAGGCTGATCCAGAGTT Gene GeneID:534293|MCM3AP:XM_002685160:149_cdna Constitutive 0 NULL GeneID:534293 1 GENE MCM3AP NULL minichromosome maintenance complex component 3 associated protein EMBV3_26333 CTCTAGCCTCATACCTGGCCCCAGAAACTGGACTCTTAGCTCATCCGCTCACTTTACAAA Gene BVT0102_005577 - 1 EMBV3_24007 GK000011.2:71931588-71996673 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03177 CCCCCGCCCTCCAAGTCCAACCTCCTATCTACTCTGGCGCTGAAATGGATTAATAAGGAA Gene GeneID:100300643|LOC100300643:XM_002692208:1410_cdna Constitutive 0 NULL GeneID:100300643 13 GENE LOC100300643 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_04157 ATGCCAGGAATTTGTGAACTGGGCAGAGGGTGATTCCTTGAGCAGAGCTGAGGACATGCA Gene GeneID:100140121|LOC100140121:XM_002689835:38_cdna Constitutive 0 NULL GeneID:100140121 8 GENE LOC100140121 NULL similar to rCG47065 EMBV3_31585 CCAAGCAAAAACCCAGGCAGAGATACAGACCCACCTTGAGACCCCTGAAGCCTGTAGTTA Gene BVV0101_047561 + 1 EMBV3_18200 GK000030.2:57926732-58029072 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31796 ATTAGAAGAAAATAGGATTTACAGGAAAATCAACAGAAAGTGCCTGCCCAAAGTCTACAG Gene GeneID:614840|GAS2:NM_001105001:16_cdna Constitutive 1 NULL GeneID:614840 29 GENE GAS2 GAS-2 MGC179442 growth arrest-specific 2 EMBV3_28473 TGCTGCACTGGGACCTGCTGTTGATCATGGCTTAAGATGACCTCTGTGGTGCCGACATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30223 GTGGCTTCCTAACCCCTGTGGTCACTGTTGCCATGACTTTTCAGCTGCCATTCTGTGCAA Gene GeneID:100300546|LOC100300546:XM_002699544:42_cdna Constitutive 0 NULL GeneID:100300546 X GENE LOC100300546 NULL similar to olfactory receptor, family 11, subfamily A, member 1 EMBV3_05476 CACATGCTCTTTAGGTTTCTGGGGTTCCTGGTAGAAGAAAGAGAAGGATTGAATCAGGAG Gene GeneID:534797|TMEM183A:NM_001034616:5_cdna Constitutive 0 NULL GeneID:534797 16 GENE TMEM183A C1orf37 MGC127514 TMEM183 transmembrane protein 183A EMBV3_40506 GAAGAGGGCAAGATTGCAAGAAGGAGCCAGTTCACCCCAGGATCTGTTTCAGGGTTTACT Gene BVT0102_079575 + 0 NULL GK000005.2:55978007-55986060 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191877 TCONS_00191879 TCONS_00191876 TCONS_00191875 TCONS_00191878 1 XLOC_117045 Coding TCONS_00191879 XLOC_117045 Coding Coding CTDSP2 5:55977601-55983233 j TSS143710 4700 3 TCONS_00191879_2 138 4 0.166045107440952 0.00116654589004491 0.00070879814408439 3.02624871670846e-09 0.000229854078322029 0.000460494828133406 6.07292793891543e-05 0.000291740207296772 0.000527411722139974 3.82879759115369e-08 0.000109910661343041 0.00018969605008167 5.66877530776705e-05 0.000279757046281601 0.000436106056971883 4.70818645252583e-05 0.00969070026614246 0.00319436823915969 0.00130513956042826 0.000387571282723976 0.000574515475720585 7.91714440802684e-05 0.00166863640708638 0.00298600441772266 0.0026842258168351 0.000380534069193135 0.000361097819387125 0.00029484461167311 0.000285360484958785 0.000364004225895343 0.00191002061458666 XR_234568.1 CTDSP2 PREDICTED: Bos taurus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 (CTDSP2), transcript variant 0.0 5566 100.00 0.656382978723404 NM_005730.3 CTDSP2 Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 (CTDSP2), mRNA. 0.0 3043 77.09 0.856595744680851 TCONS_00191879_2 sp|O14595|CTDS2_HUMAN CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2; 9e-96 281 98.53 0.978260869565217 1 coding 0 1 1 1 0.0119930419837879 0.913239037875738 0.0249895705795427 0.697640986270388 ATGGGGGCAGGGACGTAGCAGACCCATGAGGGACACGCACCCAGGGAAGCTTTCTGGCCATGATGTACAAGGTGTACGTGCTCAAGAGGCCATATGTGGACGAGTTCCTGAGACGGATGGGGGAGCTCTTTGAATGTGTTCTCTTCACTGCTAGCCTGGCCAAGTATGCCGACCCCGTGACGGATCTGCTGGACCGGTGTGGGGTGTTCCGGGCCCGCCTGTTTCGTGAGTCCTGTGTGTTCCACCAGGGCTGCTACGTCAAGGACCTCAGCCGCCTGGGAAGGGACCTAAGGAAAACCCTCATTCTGGACAACTCGCCTGCTTCCTACATCTTCCACCCAGAGAATGCAGTGCCTGTGCAGTCTTGGTTTGACGACATGGCGGACACTGAGTTGCTTAACCTGATCCCGATCTTTGAGGAGCTGAGCGGAGCCGAGGATGTCTACACCAGCCTGGGGCAGCTGCGGGCCCCTTAGCCTTCCCTGCTGCCAAGCCACGGGCATCCCAGTAGGGGGCTTTCCTACACTGTGCCTTTATGATCAGCTTGACAGAGTGGAAGCTGGAGCATCTCACCAAATGAGGCCTGGAAATAGACGTGATTGGAAAGAGCGTTAGGACAGGTTAGATGCCGAGTGGGCAAATATCAGACCAGTGATACCCAGAGCTCCCTGCTCCCTGAGTTGGGTTCCTGAGATGTGAGTGAGAGTCTATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTGCCTTGAACTGTGGCCCCAGGATATAAGCGTTTCAGGTTGGGGGAGAAAGTGAAGGATCAAGAGTCTCCTCGAGTTAGTCTGTCTCCTCTCCCTTCACCCTGAGAGCCACCGAGCTCCAGGCATGAAGACTGTTGAAGGCTCCATTGCCAAACCTATGGCCTTTCCTCAGTCTTGTAAGGTTTATGCCAAGGAGAGAGAGGGGTCAGGGGCTGCCTTCCGGTGCCCCAGGCATGCATCTTTCTGAAGCCTTTCTCTTGCCAGCTGCTGCAGACAGAGAAACGACATTTCTGGGAAGATGAAAGCTTGTTTCCAGAACTGGTAGCCCCAGTGGCAAGTCCTGTGGCCCAACAGCTGCCCTTGCCTCCAGCTGAGTGCCTGACTCGGGTCCTGTCTGCATCTCCCCAAGGCCTGGGCACTGGGCCTGCCTTCCTCGCCACCTAGCCATAGTCTTGAACCTGTGGGGAAGGAGGTCTTCTCCCTGCCCTGGAAGAGGACAGATAACTGATTTCCGTTCTTTTGACTCTGTTTTAAAATTCTCTTTCTAAATACAGAGTGTTGAGCTGTTTTGTTTCTGACAGAGCTGCAGTCCTGGGCCTGAGGTGAATGTGGGAGGCCCCGGGGGTGCGGGGATGAGCAGAATCCCCAAAGCATGAATGTGTGTGTCTCCTTGGCTTATAGGGCAGCTGAGTTTGGGTCTGTGTCTCTCGGTCTGCTCTTCAGGGAATCTCTGCTGGTGCTGCCACAAGGACTTTGTTCCCAAGTCCGGGAAGGGCGCTCAGTGTCCCACCCTCCTGTTCCTGGGCAGGGCTCTCTCCTCTCGTGTCTTCCCCCAGGGCCTGGCCTGTGCCGAGTGTCTTCATCCCTCCTGGATGGCTGGCTGGCACTTTTTCTCTCCAGAGCCTCAGGCACACTTGCATTTCCTGGGCGGAGGGGCTGGGTGTTCTCTGCGTTTAGTTTGCCAATGTAACACACATGCGCCCTGCCAACAGTAACAGGTGTAAGTGAGCTCTTCACTCACCTGTGCTTTGCGAGTCTCTTTGCTTTCAAAGTTTCTTAATAGTGCAATGCTTTAAAAAAAAAAAAAAAAAGCCACAAAAAGGAAGTTTCCCCAGGATGGAAAACAAAAGAGGAAGAGCTGCTGTAATCGGGAGCACAAGGGGCCCCCCAGGGGGAGCCCCACCTCAGCATCACTGCCTTAACTGTGGTCTCCCCTCCCTCCTTCAGGTGGGAGTTCCTGTCACCCCTCCCCCATTTTCCCTGGAGGCAGGCGTCACCAAGCATTTGTAAGTTGCTTCAGGTGCGAGAAGACTGCCCACTCAGGACTCTTCCCCCATTGTCCCTTCCGGTTCCCACACACTAGGCCAGTCTGAGGAGCTCACCAGGACCAGGCAGCGGAGCAGCAGCTTGGGCTTCTGGCTGCCCAGTGTCTTCCTCTGGCATGGTGAGGCCTTGTCTTTCACTTTGTTGTCCCATGAGTGGAGTAGGGCCCTCAAGGCATGTATGGTCATTTCCCCAGCATCATTTCCTGGTGCCTGTGGGATCCTGCTTCATGCAGGTAGGGAAAGAGGGCCCCAGGGCTGGCCAGGAACCACATCTGAAGAGAAGTAGGAGCTTCGGATTCCAAGGCCCTGGCCTAGGCCTCTCTCCTGGTATTACAGGGGGGCCTCTCTCCTAAGCCCCACTCAAAGGGTTAGACCTCTGGCCAGATCTGCCATGGGGTCCAGCCAAGCTTTCTGACTAAACAAGCAATAAGAGGCTCTAGGCTGACCCGGTTCCAAGGATCCTTTCTGCCCTCCTTTGGGTCACCTGGTCTCCAGAAAGAGCCAGTGCCACCCACTTTCCTGTCAGGCTGTCTGAGTGTTCCGAGGGATCATGACCAGGGCCCAGGATGACCTGGTGGGAGTGTCCCGCTGCTGCTGCATGAAGCCCAGCTCCGCAGGCCTGTCTCACCAGACCCCTGCCCCGCCCCCTGCGGTTCCTACCAGAAATGCCACACCCCCTCCCCCCACCCTTCCCTGGAGAGGTAGCTCAGCCAAATATAAGTCTAAGCAGGGTCCATCCGTGTGGACCAGAGCCAGTCTGAAGTCGTTATGTGCTTTCTGGTCTCCAGTTTCAGTGTGTTAGGGGCAAGAGATGATTGAAAAACTTGCTCCTTAGAGGAATCAGGCCAGACTCAACTTGGGAAGAGGGCAAGATTGCAAGAAGGAGCCAGTTCACCCCAGGATCTGTTTCAGGGTTTACTACCAGCCCTTCCTGTTTGAGGCTGGCCTTTGGGAAGCAATAGGCCACCAGGCCTGGCCAACCCCAGTTCAAGCCATGCCAGGAATCTGCCCACCTGCCAAGTTCAGTTCTTTTAAGGTGCCTCTTCAGGGACACAGAGTGTCTCTCTGATTGGGCTTCTAAATCAAAAGCCTGATGTTCGTGTCCCTCTCATAGGGGGAGCTTTGGACACAGGACCAGTGTGGAAGGGTCAGGTAAGGGTCTCCACTCTGCACATTGTAGAGGGGACCCTTTGCGGGCCCATGGTCCCTCACTAAAGAGGTTGAGGTAACTTGCCTTCAGTTAACCTGGGACCTTCTGTTTAATTCCCTCCTGCCTCCCAAAGATTTGGACCATTTTATAAATGTATAAATTCACCTCTGTTCTCAGTGGCCCCGAAGCTTCCCTGTGCTAACAGCATGGGAAGTCTAAAGGCAGTCATTCCCTGGGAAGTGAGTCCCGCTCTGTTTTGCAACCATACCCTGTTCCTGAGGAGGCCTCATTCAGTAAGGCAACTCCCCATCCCCCGCCAAGGTTGTCTTGCATTTCCCAGCCAAGTCAAGTGTCTACAGAAGGTAAACCTGTTTTCCCCTTTAGGTCTTCATTTGGTTATTTGTTAACTGTTGTCCCTCAGTTGCCTTTTTTGTAAAATGAGGTTTTAGTTTTGTCTTCTAAAAAAAAAAAAAACACCGGTAAATACTTGCATTCAAGCCAGGGAGGGGAGGCAGAGGTCTGGCCCCCTGCCACATTCTCTTAATGCTGTGGGGCATGCCCCTGGAGCAGACTCTCGTCTTTGGGGCCCTGAGCTTCTTTGCTTGTAGTTATCTCAGATTTGACCTGTCTCTGTTGTGCCGCTCAACCCCCTTCAAGACGCCATCTGGAGGGTCAGGGAGGTCTGCCTCCCACTGTGACTGGGCTCTGGGGTTCTGACCACCTTGCTTACAAGTCCATAATTTGATAAATTTGTTGTATTCAAAAACTTGAAATGTAGGATGCCATTAAGTGTCTGTTTATATTTTTGAAATATTTGTATTACTTACAATTAATGAATAAAAGTGGGTTTAAAAAACCCATCCATGAATGGATGCTGTCTCCTGTCCCTGCTCTTGTTCATTCGTAACTTACCCCCCACCCTTTGTTCCCTCAGAACCCCTCTGTCATTACGAGGCTGGAGTGCCCAGGCTGGGAGACCAACTGTGGACTCAGCACAGGGATTCTGCCCAAGGTCACAGAACTTGGGCTCCATTAGCTCTTCCCTGGCCCCCGGGTAGAATCAACCCCATTCCCTCCAGGTGCTTAATAAGCATAAGCTTGGTGTTCTGTTGACTTCTGGTGAGGAACTGGAAGCTCCGGAGGGACTTAGGGATGTAGAGTCTTCCTTCTGTACCCCTTACTGGTTTTCCCAGAGTAGGAGCCCTGGAACTCAACAGTGGTTCCTGGCACCTAGTAAGCACTCAGATTTTGATTGGACTGCCATATGACCCCCCAAGGGACAAAACAGAATGACCTGATAACACACTGTGGCCCTTCACCCAGACTTCACCTCCGAGAAATGCCTAGAAACTTCTGGGGGAGGCGCTTGCCAGCCTGGACATCCCAGGGGCTCAGCGGGCGGCCCAGCCCTGCCTCCTGTCATCAGTGTAATGCATTCATATCTACAGGATGGCAAATTTCATATCCTCCCACCC EMBV3_29340 AAGAATTTTGGCAGATCACCCCCTCAGCAGGGTCTGCGCATCGCCGCCGGGATGAAGCTG Variant GeneID:280713|ADM:NM_173888:22_cdna 130^231 1 EMBV3_16887 GeneID:280713 15 GENE ADM NULL adrenomedullin EMBV3_30738 GAACTTGCAAAACTTTGCAGCATCTAGCAGAACAAAATGGAAGGGCTTCAGCAGGGTGGA Variant GeneID:530077|LOC530077:XM_002687043:139_cdna 238^321 1 EMBV3_16145 GeneID:530077 4 GENE LOC530077 NULL similar to GTPase, IMAP family member 5 EMBV3_40062 AGCTGAAGTACCAGTACTTTGGCCACTTGATGCAAAGATCTGACTCACTGGAAACGACCC Gene BVT0102_433605 + 0 NULL GK000004.2:83282922-83307118 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37570 GTTCACTGGGCTCTAAAGGCGAAGGATCTAGGCCAAAACGTGTTAGTGATCTGTTGGTTG Gene GeneID:507631|TYMS:NM_001037816:56_cdna Constitutive 2 NULL GeneID:507631 24 GENE TYMS MGC134366 TS thymidylate synthetase EMBV3_21000 ATCATTACCGTCTACCTGCAGCCCACACCTAACCCCATGCTAGGAACCGTGGTGCAAATT Gene GeneID:517144|LOC517144:XM_002699133:221_cdna Constitutive 0 NULL GeneID:517144 29 GENE LOC517144 NULL similar to seven transmembrane helix receptor EMBV3_03645 CAGAGGCCTTGCCCCAGGAAGCTCTGAATGAGATGGTGGCTAACCTGATGAAGTTCTTTC Gene GeneID:527384|LOC527384:XM_002699657:176_cdna Constitutive 0 NULL GeneID:527384 X GENE LOC527384 NULL similar to Melanoma-associated antigen 9 (MAGE-9 antigen) (Cancer/testis antigen 1.9) (CT1.9) EMBV3_07516 AAGGCTTGTGGCGAAGTGCAAGTTGTGATGTGTTCAAGAATGGCAAGACGGCCAGTGAAG Gene BVV0102_245137 + 0 NULL GK000016.2:70830810-70886829 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33377 ACGACCGTCTTCGGTATAGTGTCCTACGTCAAGAGCTCAAAGCCAGAGAGAAATCACAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26687 CATGCTTTTGATATGGAGGATTTGGGAGATAAAGCTGTGTACTGCCGTTGTTGGAGGTCC Gene GeneID:531444|CISD1:NM_001034057:93_cdna Constitutive 0 NULL GeneID:531444 26 GENE CISD1 MGC128185 CDGSH iron sulfur domain 1 EMBV3_12539 GACAACACCAGGCAGCAAGGATCTTTCCAGGTATTTACGAAATTTTTAGTAAGGAAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23636 TTCCAATAGTTTGCATCCCCTGTGGTGCAGTGCCAGTGGTTGAATATAAGCAGCTTTAAC Gene BVV0102_235786 + 0 NULL GK000004.2:120386651-120427001 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37381 ACAGCAGATTCTCAACGTCTCCAAGCTGAGCCCCGAGGAGATCCAGAAGAACTACGAACA Gene GeneID:444880|Magmas:NM_001002893:51_cdna Constitutive 0 NULL GeneID:444880 25 GENE Magmas NULL mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction EMBV3_05900 TAGTTGCTGAGTCATGTCCGACTCTTTTGTGACTCCATGTACTGCAGCCTGTCAGACTCC Gene BVV0102_166900 + 0 NULL GK000005.2:36316934-36386395 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10287 ACCCAATGCTCTTCAAAATACCAGCCACTCTTCTAAGTGCCACAAACCAGGAGCACGAGG Gene GeneID:100138565|KSR1:XM_002695662:139_cdna Constitutive 0 NULL GeneID:100138565 19 GENE KSR1 NULL kinase suppressor of ras 1 EMBV3_27378 CAGTTGTTTCAGCGCTCCAGGAATCTGAGAGGGATTGTTTCTTAAGGTTTCTGGGGAAGT Gene BVV0102_238050 + 0 NULL GK000019.2:57004465-57007702 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097980 TCONS_00097981 1 XLOC_058394 Coding TCONS_00097981 XLOC_058394 Coding Coding KCTD2 19:57005775-57019659 = TSS72485 3255 2 TCONS_00097981_5 117 6 0.765972772455521 0.00584351479014919 0.00555593942534155 0.00331493612732773 0.00341860592292223 0.00302004999399206 0.000884612151117681 0.00315861285778161 0.00413030267768025 0.00432441798336328 0.00020432637187497 0.00134025399730009 0.000423997048472864 0.00153028076373428 0.00163157895449704 0.00151109607254174 0.00700248165374841 0.00530452714122006 0.00146430920481745 0.00519912933361401 0.00502406028743254 0.00171131527186074 0.00282006164462607 0.00149373960635988 0.00535127693744117 0.00279692918051141 0.00330464121807585 0.00333547248220311 0.0015226109789689 0.000668949030173142 0.00204651016648203 XM_002696210.2 KCTD2 PREDICTED: Bos taurus potassium channel tetramerization domain containing 2 (KCTD2), partial mRNA. 0.0 5871 100.00 0.999692780337942 NM_015353.1 KCTD2 Homo sapiens potassium channel tetramerization domain containing 2 (KCTD2), mRNA. 0.0 1335 74.20 0.652227342549923 0 coding 0 0 1 1 -0.256897712773479 0.128359527013488 -0.256897712773479 0.128359527013488 GCCGCCGCGCAGCCGCTGGAGCCGGGTCCCGGGCCGCCGGAGCGGACAGGGGGCGGTGGCGCGGCCCGCTGGGTCCGGCTGAACGTGGGCGGCACCTACTTCGTGACCACCAGGCAGACCCTAGGCCGGGAGCCCAAGTCTTTTCTCTGCCGCCTCTGCTGCCAGGAGGACCCGGAGCTGGACTCGGACAAGGACGAGACGGGGGCCTACCTGATTGACAGGGACCCCACCTACTTTGGTCCGATCCTAAACTACCTCCGCCACGGGAAGCTCATCATCACAAAGGAGTTGGCAGAAGAAGGCGTGCTGGAGGAAGCGGAGTTTTACAACATTGCATCTCTTGTGCGACTGGTTAAGGAAAGAATACGGGACAACGAGAACAGAACTTCACAGGGCCCCGTGAAGCACGTGTACCGAGTCCTGCAATGCCAAGAGGAGGAGCTCACGCAGATGGTATCCACTATGTCCGATGGTTGGAAATTCGAACAGCTAATCAGCATCGGATCCTCCTATAACTATGGGAATGAGGATCAGGCAGAGTTCCTCTGTGTTGTCTCCAGAGAACTAAATAATTCTACCAACGGCATTGTCATCGAGCCGAGCGAGAAGGCGAAGATTCTTCAGGAGAGAGGGTCTCGGATGTAAACTCCCGAGTCGTCAGTGACGAGCGCGCCCAGCCGAGCACGTCTGTGAAATTCAGTCTCGCTCCTGTACAGTAACCGAGCTACTGCCAAGCCAAGCCGCGCCTGGCCCCCAGTGGAGGAGAGTTCTGGTCAAAACCAAAGGAGCCACACCCCCATCCACAGGAACCCGAAGACAGATGCCGCTTTCAGCTGCACAGTACCTTCTCAGAAACCTGCTTTTCTTTTCTTAGCCGGTGTTGTGACAAACCTCTCCAAGAGCACTGGGCTGGGTTCCCAGGTGGAGCTTGTCTCAGGATGGGGCGGGGAGGAGGAAGCCCTAGGTCCTTGCAGATGCTGTACTTCCTGGAAGCTGGAGCGTGTGCAAGAGGGTTGTCCTGAGCTGTGCCACGTTTTCACCTGAGTGTGCCCTGTTGGACACGGGCAGTCGCTTCATCACGCCACCTTTCTCTCCCACACACCCCAGACTACCGCAGCAGATGCAGAGTCTGGTTTAGGCTGTTGAATTGAGGTTTCGGTGAGGGATAGAGTCGCCAGAGCACCCCCACATTCCTATGAACAAAGCCTCTTTGAGGAGGGGAGGATGGGGGGGTCGCAGCTCTGGATTCAGGCTACCAGCTGCCCCATGTTTGGCTTGCCTCATTTCTCTCCAGCAGCTGGCACCCCGTCCCCCGGCCCCAGATAGCTCACCTTCTCCCCAAGAAGAGGTTCAAGGCAGGCGGTATCCTGCACGGAGTCAGACAGACAGACTGGGGGGCACTGTAGGTAGCTGGTGTAACTGCTTCTGTAGCTTTTGCCTGCCCTCTGTTGGCCCGTCTTCCTTCCCTGACTTTTTAAACTGGGGCCGAGGATAAAGGGATTTTGGACCCTCTGATGCCTTGGGGTGGAGACAGCCGTTTTCTCCGAAAGTTGCCAAATGTAGTCTGTAGTATCAAAAGTGGCGTGTTTTTGTGATGTCTCTTAGAAATGCCTTGATCGAAAGTGTGATACTTGTGTCTCTTCTTGGTTTCTGGCCTTGGCAGTGGTCGTGAGCCCCTGCCATCCGCTGTGTGTATGTGCATTTGACGGGCGGGCCCAGGACCCCCTCATCTGACCCAGCCCTCACCGCCACTTCCTTCTGTGGGGGCTGAGGCATCTAAGATCCAGTGTTTGACTCAGGAGCCAAGCCTCAGAGCTCGTAACTGGATTGCTGTCTGAGCTTCCGAGTCTTGGTGAGCAGTCATGGAGCTCAAAGGGGCCAGAGAGCCCTGGCTTTTCCCTGGGTGACTTTCCTAGTATGGCAGGTGGTCCAGAGAAGGGGAGGTGCCTGTGGGGAGCGCTTTGTTCATAAAAGATCCCTCAAGCCCGTGGCTCCTTCTAAGCTGAGGTTCCCTTTGCCCCCCAGCTCAGCTGCTCACCGCATGGCTCTGGGGTCAGGGTTGCTTTAAAGTGACTATCGACTGTGCCAAGTGTCTTTCGAGCCTGTGACCGGCCCCTGCCCAGACAGGAACCTCATGTTGCCCTCACACGTCTGTGTGTAGAGTAGGGGAGAAGTGTGTGTCCGGGGTGCCTGCTGACACACTGTGTCTACACCCCAGTGTGAACGTGCATGTCAGCACCACGGACGTCTGGCCCGTGCCCAGGACTCTTACAGCTGTAAAATGTTAGAGGAACTGCTACCTACAATAAACAGTTACACCTGCAGAATGGTTGCAGGTGTCCATCCTGACCTCTTTCACGGGGAAAAAGAATTGAACACGTCAAGGAAAAGCTGCCATCAACCAGAGGATGGTGGGTGAGGAGCTCTGGTCAGTGGGAGTTAGCACCATCAGACTGAAAGGAGGCAAGCCTTGGTGTCTGGGGCCGCAAGCCCAAGCAGACCTGCTTGTCTGGGGCTCATCTGAAAACCAGCCTCTGGTCCCAAGTCAGCAAGCAGGAGCGAGGAGGCTGGAGGGCAGAGGGGGCCAGGCCCTCTGGACGCGTCTTTCTCATCAAGCTTCTCACGGGTCTGCCGTGGAGTCTGCGAAGACCGGCGCGACCCTCGCTGAGCGCTCAGAGGGACCAGCAGGCCGCCTTTCCCCAGGTTCCCTCCCCCGGCCACCCAGCAACAGTCTCAGTTGTTTCAGCGCTCCAGGAATCTGAGAGGGATTGTTTCTTAAGGTTTCTGGGGAAGTATTTTACCCAAGCCCTTCGTGAACCAAGTTGGTATTTTTTTCCTGAAAGCCGGCTCCCTCAGGGAGAGCCTGGCTGACCGCTCCAGAGAGAGGCCCAGCCATTGGCTGGGGGGTCACGTGAGCAGTGCCCCACGCTCTCCTGCTGCCCAGGGCCGCCACGTGGGTGACGCTGGCCAGCAGGGCCCAGCCTCCTCTGGAGTGGCTTTGTTTATGCACAGTTCTAACTGATCTCAGGGGTGTCCGTGAGGCATAGAGGAGGAGGAGACATGCTGAGGGGAAGGGCTGAGAAGTCACCCACACCCTCCGGGATGGCCTTAGAGCCAGGCCTTAGGGACCATACCTGTCACTTGTGGGTGCCCTTTGTTGCCGTTTGTGTCTTTGAATAAAGTCTGAAATGCTGTGACCCTTTCCCCGCCCCCCCTTGTCAATAAAGACATGAAACAGACTTCTGAATCTTGAAA EMBV3_07200 GCAAAGATGGGCTCAGTGGAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGGTATT Gene BVV0102_130096 + 0 NULL GK000011.2:22879635-23003856 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198236 TCONS_00100359 TCONS_00113351 TCONS_00250480 TCONS_00250661 TCONS_00064985 TCONS_00068672 TCONS_00116077 TCONS_00156752 TCONS_00164536 TCONS_00251526 TCONS_00066155 TCONS_00089611 TCONS_00130324 TCONS_00065417 TCONS_00040258 TCONS_00098636 TCONS_00113349 TCONS_00022599 TCONS_00187798 TCONS_00152742 TCONS_00091779 TCONS_00106693 TCONS_00041139 TCONS_00085918 TCONS_00199862 TCONS_00100947 TCONS_00153688 TCONS_00233719 TCONS_00109753 TCONS_00106695 TCONS_00188826 TCONS_00020686 TCONS_00113356 TCONS_00197922 TCONS_00024385 TCONS_00108379 TCONS_00111173 TCONS_00126150 TCONS_00154504 TCONS_00178271 TCONS_00253634 TCONS_00126154 TCONS_00131340 TCONS_00136813 TCONS_00175916 TCONS_00185777 TCONS_00074591 TCONS_00098435 TCONS_00185766 TCONS_00032664 TCONS_00137172 TCONS_00252122 TCONS_00109794 TCONS_00176157 TCONS_00221624 TCONS_00126464 TCONS_00098597 TCONS_00119055 TCONS_00073726 TCONS_00162607 TCONS_00252752 TCONS_00089829 TCONS_00153040 TCONS_00078868 TCONS_00199615 TCONS_00196654 TCONS_00189731 TCONS_00198653 TCONS_00119057 TCONS_00119053 TCONS_00229688 TCONS_00142520 TCONS_00250280 TCONS_00254634 TCONS_00032445 TCONS_00226162 TCONS_00025022 TCONS_00113358 TCONS_00119048 TCONS_00126142 TCONS_00175559 TCONS_00180497 TCONS_00124596 TCONS_00037845 TCONS_00031376 TCONS_00090615 TCONS_00201403 TCONS_00250579 TCONS_00010356 TCONS_00147942 TCONS_00010560 TCONS_00207738 TCONS_00161765 TCONS_00123385 TCONS_00197026 TCONS_00143295 TCONS_00220547 TCONS_00243251 TCONS_00053909 TCONS_00063467 TCONS_00234231 TCONS_00185968 TCONS_00179090 TCONS_00008259 TCONS_00008657 TCONS_00131305 TCONS_00020727 TCONS_00085917 TCONS_00119047 TCONS_00164537 TCONS_00160911 TCONS_00187671 TCONS_00038827 TCONS_00219257 TCONS_00064146 TCONS_00021272 TCONS_00205612 TCONS_00126152 TCONS_00207975 TCONS_00150799 TCONS_00007670 TCONS_00113350 TCONS_00197537 TCONS_00126459 TCONS_00066197 TCONS_00200112 TCONS_00113357 TCONS_00032678 TCONS_00122914 TCONS_00153235 TCONS_00010310 TCONS_00126153 TCONS_00021121 TCONS_00162467 TCONS_00130095 TCONS_00113354 TCONS_00232046 TCONS_00079056 TCONS_00251060 TCONS_00229186 TCONS_00221465 TCONS_00219647 TCONS_00058292 TCONS_00253150 TCONS_00007370 TCONS_00119054 TCONS_00119049 TCONS_00017658 TCONS_00126470 TCONS_00164538 TCONS_00110370 TCONS_00136193 TCONS_00078985 TCONS_00119056 TCONS_00062800 TCONS_00078558 TCONS_00161572 TCONS_00250266 TCONS_00031163 TCONS_00129756 TCONS_00250423 TCONS_00108035 TCONS_00025023 TCONS_00200828 TCONS_00113359 TCONS_00126148 TCONS_00119052 TCONS_00122398 TCONS_00232761 TCONS_00152030 TCONS_00023556 TCONS_00254309 TCONS_00086569 TCONS_00113348 TCONS_00010238 TCONS_00106694 TCONS_00053908 TCONS_00031787 TCONS_00253911 TCONS_00024384 TCONS_00219730 TCONS_00242016 TCONS_00100616 TCONS_00251149 TCONS_00179794 TCONS_00030952 TCONS_00168038 TCONS_00231913 TCONS_00011085 TCONS_00110304 TCONS_00001358 TCONS_00122851 TCONS_00181195 TCONS_00119051 163 XLOC_119893 XLOC_060602 XLOC_069014 XLOC_153423 XLOC_153604 XLOC_039709 XLOC_041763 XLOC_070246 XLOC_095212 XLOC_100254 XLOC_154467 XLOC_040872 XLOC_054395 XLOC_079033 XLOC_040136 XLOC_024074 XLOC_058881 XLOC_013269 XLOC_113841 XLOC_092507 XLOC_056551 XLOC_062871 XLOC_024949 XLOC_051996 XLOC_121514 XLOC_061189 XLOC_093450 XLOC_143200 XLOC_065657 XLOC_114867 XLOC_011361 XLOC_119583 XLOC_014494 XLOC_064285 XLOC_067073 XLOC_077380 XLOC_094264 XLOC_108044 XLOC_156573 XLOC_080045 XLOC_083024 XLOC_105695 XLOC_111830 XLOC_046345 XLOC_058681 XLOC_111819 XLOC_018904 XLOC_083382 XLOC_155063 XLOC_065698 XLOC_105936 XLOC_134937 XLOC_077438 XLOC_058842 XLOC_072803 XLOC_045488 XLOC_099488 XLOC_155693 XLOC_054611 XLOC_092805 XLOC_047753 XLOC_121268 XLOC_118400 XLOC_115769 XLOC_120307 XLOC_139182 XLOC_086945 XLOC_153223 XLOC_157566 XLOC_018685 XLOC_137937 XLOC_014641 XLOC_105340 XLOC_110264 XLOC_076140 XLOC_021674 XLOC_017624 XLOC_055395 XLOC_123049 XLOC_153522 XLOC_005907 XLOC_089827 XLOC_006111 XLOC_126253 XLOC_098652 XLOC_074939 XLOC_118691 XLOC_087717 XLOC_133864 XLOC_149914 XLOC_031856 XLOC_038194 XLOC_143710 XLOC_112021 XLOC_108863 XLOC_003817 XLOC_004214 XLOC_080010 XLOC_011402 XLOC_097804 XLOC_113716 XLOC_022648 XLOC_132576 XLOC_038872 XLOC_011945 XLOC_124684 XLOC_126489 XLOC_091954 XLOC_003231 XLOC_119198 XLOC_040914 XLOC_121764 XLOC_018918 XLOC_074468 XLOC_093000 XLOC_005861 XLOC_011794 XLOC_099348 XLOC_078806 XLOC_141533 XLOC_047941 XLOC_154003 XLOC_138681 XLOC_134779 XLOC_132966 XLOC_036059 XLOC_156091 XLOC_002931 XLOC_009078 XLOC_066274 XLOC_082409 XLOC_047870 XLOC_037527 XLOC_047446 XLOC_098460 XLOC_153209 XLOC_017412 XLOC_078469 XLOC_153366 XLOC_063945 XLOC_122479 XLOC_073953 XLOC_142245 XLOC_092240 XLOC_014223 XLOC_157243 XLOC_052184 XLOC_005790 XLOC_018032 XLOC_156849 XLOC_133049 XLOC_148680 XLOC_060858 XLOC_154092 XLOC_109564 XLOC_017202 XLOC_102874 XLOC_141401 XLOC_006636 XLOC_066208 XLOC_000334 XLOC_074405 XLOC_110562 Coding TCONS_00196654 XLOC_118400 Coding Coding PNPLA3 5:114959864-115014122 = TSS146286 8151 1 TCONS_00196654_3 531 0.568151147098516 13 0.850010136940856 5.89876291415044e-05 3.15153418752854e-05 3.29130043297627e-05 2.59624223173378e-05 2.20213274024594e-05 1.4496162216887e-06 9.48251118053323e-05 5.15896206190356e-06 5.54760148107161e-05 0.000235938474950753 0.00019441326777349 8.9349876479414e-05 7.67343864975346e-06 3.61392880773479e-05 3.63228777626609e-05 0.00744770511677906 0.00251913245768283 0.00257607319979578 4.42586817272491e-06 1.86109887723752e-05 3.89347427037933e-06 0.00220176912508276 0.00197643567127696 0.00261654031494228 1.4581504266532e-05 3.01650521480806e-05 2.37076584200379e-05 0.000388194564081781 0.000566336010450564 0.00064585302379113 XM_002687974.3 PNPLA3 PREDICTED: Bos taurus patatin-like phospholipase domain containing 3 (PNPLA3), mRNA. 0.0 3041 100.00 0.206723101459944 XM_005261754.1 PNPLA3 PREDICTED: Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), transcript variant X1, mRNA. 0.0 686 73.55 0.133480554533186 TCONS_00196654_3 sp|Q9NST1|PLPL3_HUMAN PLPL3_HUMAN Patatin-like phospholipase domain-containing protein 3; 2e-148 439 57.81 0.704331450094162 1 coding 0 0 1 1 -0.0266304558446969 0.849327696487349 0.0012879508776763 0.980163879338 ATGGCTGGCACCAAGGTGGGCTTGGCTGAAGGCTGTGGGGACTGGAGCCAGCTAGGGTGGCAATTGGAGGTGGAGTCATCGCTTCACAAGCCAGACCCTCCTGTTGTGAACATCAGCCTGAGGGAAGTGGTCACCTCCAGCACGGACCTGTCCTCACGTTGCTGCTCCACCCTCTGCCTTGTCCCGGAGGAGCTTGCCCTGCCATGGGGCTGGCACCTGATGTTCCAGAGCAAGGCTGGGCCTGCGCTGGGCACTGGGGACAAGATGTCCCAGCTCTGGAGCCTCGCCTCCTGGATGACATTTGGGGCCCGTGGGAGCCCCTCCACGCCCGAACCTGGGAACAGCCACTTGCATTACATCGCTTCAGGCACCTGGCCCTTCGGGAGAGACATGCTGATCGACTTCAGCGGTATTCTGCTCCATCTCATTGCTGTCATCGTACTCAACAACTGCCTCCAGCATGACCAGACGTTGCAGATCCTCATGGACCTCACCCGGAGCGCCAGAAGCCAGAAATTCGGGATCGTCCACCCAGGCTTCAGTTTGAGCAAGCACATCCGAGACGGTCTCCAGAGACACCTCCCTGACAACGTCCACCAGCTTGTCTCGGGCAAGATGGTCATCTCGCTTACCAGAGTGTCGGACGGAAAAAACGTGCTGGTGTCGGATTTTCATTCCAAAGACGAAGTCGTGGACGCCTTGTGTTGTTCCTCCTACGTCCCTTTCATCTGTGGCTGGATCCCCCCTTCCTTCAGAGGCGTGCGATATGTGGATGGAGGAATAAGTGATAACATACCCTTTGTTGATACCAAAAGGACCATCACTGTGTCCCCCTTCTATGGGGAGAGCGACATCTGCCCCAAAGTCAAGTCCACGTTCTTTCTTAACGAAGGATTCACCAAGCTCAATATGCAGTTCTGCACAGAGAACCTCTACCTGATGTTCCAGTCGCTGTTCCCACCAGATGTCAAGGTGCTTGGAGAGCTATGCCTTCAAGGATATGTGGACGCGCTCAGGTTCTTGGAGAAGAATGGCATCCGTGATGGGCCCCATCCGTGCCTGAGCGCGCCCCCCGCAGAGTCGGAGCCCAGGAGCCTGGAGCCTTTTCTGGGTGTGGCCCCCAGGGAGGCGGGGCCCAAGCCAGTGGAGCTGCTGGACCACTTGCATCTCAGCATGCTGACCTGGGACGAGAGCGTCCTGGAGACCCAGTCGCCCGAGCTCAGCATGGCACTGAGGAAGGCAGTCAGAAACCCAGATGGGTACAGAAACAGGATTTGCAACTTCTTACCAGTTAAGATCATGTCCTACGTGATGCTGCCCTGTACGCTGCCCGTGGAGTCTGCCATCGCTGTGGTCCAGAGACTGGTGACGTGGCTTCCAGACATGCCCAGCGACATCCAGTGGCTGTGGTCGGCCACCTCCCACGTGTGTTCTCAAGCCATGGTGCGTCTGCTCCCCGCTTCCAGATCCCAAATCCCAGCAAGCAGCCAACGGCCTTCCTCCACAAACCCGGACACTGTGGGCGTCGCTGGGCTCTCTGCTCCTCCGAGGACCTGGACACGCACCCTGTGGATGTCCTGCAGAGGCCAGAGCTGACAACTATGATGTCCGCAGAATGACCTGTGTGCTGAGTTTGTAGTGTCCTGAAACCAAAGGCAATCTTTCTAACAAAAAGCTAGGAAGCTACTCTTGGTGTGCGCGGTGGGTGCAGAGCTCAAGCATATCCAGGATATGAGTCTCTAAATATCGTTGGCTCGGTTGGGAAACTGCACAAGGGAGCCCGGCGTGGGGGCATCTGTGGCTGACTCCTCACCCTCTCAGCTGCCCCAGGGCACGTTCCTAGGGTGACTGGTGTTTGGATCAGGGACGTTGTGGCGGGGAGCTGGGCTGCCCTTTGTGCAGTCACAGTGGTTGGGGGGAAGGACTGTGGTCCCATCTCTCCATAGAGAAAGCAGCCAGTGTCGGGGAGGTGGGGTGCCATCCTCCCAAGGACACCCCTGGTTTCAGGGGGCATTCCGAGGTGGTAACTTACGTGAACTCTGGTACATCTTTCTGCTGCTGCTACTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACTAGGCTCTTCTGTCCCTGGATTCTCCAGGCAAGAATACTGGAATGTGCCGGGGTCCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACAGCGTAGGCGAAGATCAGGAAACAACTGCTTAATTAAACGTTAATTAAGGATATAAGGAGTAATAGAATAAGGATAGTTCAGTAGGAAATTCAGTGAAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTGAGAGAAAGAACGACATGGGGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAATAGTTTTTATACCTTAAGTTATGGATAATGGGGGAAGGGGTGGAGTCATGCAAGGACAGCAGCTCCTGGTCCTAAATGAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAAAAACTTATTTTTCTCTAAAGGTGATTGGTCAGGAGCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGTCACAGGAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTGTAACTACTCAAAAGAATCTGTGTTTAGACAGTTTAGAACATCTCCTGCCTCTCACAGTTGGGAGGCTTTGAACAATCACATGTGGCCAGAAAAACCTATTCAGGCAGGCTAGAGGATTTCCAAAGGAGTTTGTAGCTTAAACACTGTCACACCCAGGAATTATTAACTGGAGCTGCAAGCCAACTCCTCTCCCAGAGAGGTAGTGGGGGACAGCCCCCCGCAAAGTCAGAGGTGCAGGTGAAGGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATGGGGGACTCCTGAGGCTCAATCCCGCCTTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCATGGGCGGAGTTCCTCACGCTGGCTCCTGGCAGTGATAGAATTCCAGTTGAGCTATTCCAGATCCTGAAAGATGATGCTGTGGAAAGTGCTGCACTCAATATGCAATATGCCGGCTCCCGGCAGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAATCAGTCGTGCCCGACTCTTAGCGACCTCATGGACTGCAGCCTACCAGGATCCTCTGTCCATGGGATTTTCCAGGCAATAGTACTTACCTATCCTAAATATTTGGTGGAGTTATATTAAACATAACTCTCAGCAGGCACTGAGAGAGAGCATCAGAGGGCAGACAGATGGAAACCACAATCACAGACAACAGGCCAATCTGATCAAACGGACCACCCAAGACGGACGGGTCATGGTGGAGAGGTCTGACGGAATGTGGACGACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCTTGAACAGCATGAAAAGCCAAAAAGATAGGACACTGAAAGATGAACCCCCCAGGTTGGTAGGTCGCTGATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAAATGAAGTGATGGGGCCAAAGCAAAAACACCACCCAGTTGTGGATGGGACTGGTGACAGAAGCAAGGTCCGATGCTGGAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAGGAGATGACAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTCAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATAGCTTGGTAATCCAAGCCTATGTCCCAACCAGTAACAGTGAAGAAGCTGAAGTCGAACAATTCTATGAAGACCTACAAGACCTTCTAGAACTAACACCCCAAAATGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGCCAAAAGCTAATAGAGTTCTGCTAAGAGAACACACTGGTCATAGCAAACACTCTCTTCCAACAACACAAGAGAAGATTCTACACATAGACATCACCAGATGGTCAACACTGAAATCAGATTGATTCTATTCTTTGAAGCCAAAGATGGAGAAGGTATATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTCAAGAAAGTGGAGAAAACCATTCAGATATGACCTAAATCAAATCCCTTATGACTATACAGTGGAAGTGAGAAATAGATTTAAGGGACTAGATGTGATAGAGTGCCTGATGAACTATGGACGCAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATACAAAAAAGCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAACTGAAGTGAAAAGCAGAGGAGAAAAGGAAAGATATAAGCATCTGAATGCAGAGTTCCAAAGAATAGCACAGAGAGATAAGAAAACCTTCCTCAGAGATCATGCAAAGAAATAGAGGAAAACGATAGAATGGGAAAGACGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAATCTTCATGACCCAGATAATCACGATGGTGTGATCACTGACCTATAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTACGAACAAAGCTAGTGGAGGTGATAGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACCCAATATGCCAGCAAATTTGGAACACTCAGCAGTGGCCACAGGACTGGAAAGGTTCAGTTTTCACTCCAATCCCAAAGAAGAGCAATGCAAAGAATGCTCAAGCAAACCACACAGTTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCATGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAATATTCACTGGATCATGGAAAAAGCAAGAGAATTCCAGAAAAACATCTATTTCTGCTTTCTTGACTACGCCAAAGCCATTGACTGTGTGGATCACAATCAACTGTGGAAAATTCTGGAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCCGTATGCAGTTCAGGAAGCAATAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTACTTATTTAACTTATATGCAGAATACATCATGAAAAACGCTGGGCTGGAGGAAGCACAAGGTGGAATCAAGATTGCCAGGAGAAATATCAATAACTTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGGTCCCATCACTTCATTGCAAATACATGGGGAAATAGTGACTGACTTTATTCTTCTGGGCTTCAAAATCACTGCAGAATGGTGACTGCAGCCACCATCTGAAATTAAAAGATGAAATTCAAAGGTGCATACTCCTCGGAAGGAAAGTTATAACCAACCTAGACAGGATATTATAAAGCACAGAGACATTACTTTGCCAACAGAGGTTCATCTAGTCAAGACTATGGTTTTTCCAGTGGTCATGTGTGGATGTGAGAGTTAGAATATAAAGAATGCTGAGCACAGAAGAATTGATGCTTTTGAACTGTCCTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATCTATCCAGTCCATCCTAAAGGAGATCAGTCCTGAATTTTCATTGTAAGGACTAATGTTGAAGCTGAAACTCCCAATACTTTGGCCACCTGATGTGAAGAGTTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAAAAGTGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTAATTGACAGAGGCCTACATGCTACAGTTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTTATATTAAACAAAGGATTCTTAAAATCTCTTGAATTATCTATTATGAGGATCAAGAAAACATTCAGAGAATAAGTCTTGAAAATAGAAATCCAGTGCATAAGACAGTCACCCTGGCACCTGCCCCCGCACCCCTCCCCCGCGAGCTCTAATGGAGACGAGCAGGAGGCAGGCACGCACCGTCTCTCCAGGGTGGTAATCTGTTGGCAGGCACAGATTACATGGGCCCACTGCCCGTGTAATATGACCCAAGGAGCAATGTGGCGTGCGTTTTGCTTATTTATGCATTTGAGGATACCAAAAAGGAAAGGAACAATCAGCTCAAATCCTACTTCTGGGCGTGCAAAGTCACAGCTCTCACCCACATCGTGTAGGTGTCCTGGAGCCGAAGAACCAGCAGGGCCAGACAGAGCACCGCACCGTGAGGGCAGCAGGCAGGGACTGCCTGTGAAAACACAGGGTCGGCTCGCAGTGCAGGGAAGTGCCCCATGGGGGCTCCTGGCTGGCTCCTCACATTTCTGGGGTCTCCTGTGCTGGTAACCCTCACTTCCCGAGTGAGGCAAGGCTGAGTGGTGGGCTCTCTGGCCACCTGGGCCCCAGGTCAAAGCACTGTCCCCTTGCTGAGCTGACCTGGACTCCTGGTGACACCCTCACACCTTCCCTGAGCCCGGTGCTCGGGGTCCCAGTGGCCTTCTCTGCCAGAACCATCGCCCGGGTCTTAACACATGCAACCCCACCTTAGCAGCATCTTACAGTAACCAAGACACTTTCATTTATATAGTATTCTCTGCACTGGTTCTGACGTCATCGTAGGGAAAAAGATGTGTTAAGATAGGATTACATGGGACTTATTTTCTTACTGTCTGTGATTATTCCATCTTCTTACGATCAGCATGTGTTTTATTAATTCGTTTCAAACGTGCAGTAACACGAGGAAGTGTATTACTGTTTCTTAGGAATATCCCGGGTTCCGCCTCACTGGTGCCTTGTCTCCTCATTGGCTGACCCAGGCCTCCCCCCGACATCCTCACCGCCCCCCAGGCCCTCACCTCTCCAGCACTGCGGGTTTCTCATCAGCGTGTAAAACATTCTCAAGTTTCTCCCACCTTGTCAAATATTGATGATCCGCTCGGTATGCGGGGATGCTCCAGTATCAGGAATCATTGGTGTGCAGTGTGATTCATGCCAGGGAGCAACCGTCTGTTTGGTAAACAGATAGCAGAGCCTGCTGAGAAGCATGAGCCCAGTCTTGCTAAGGAAATAAAATGTGTGTGTAGAGTGGACACTGAAAGACTGTTTGCCCGGTTACCGACGGTGGTTACCATGATGCCGTCCCCTGTAATTACATTTTATATTAAATTTCTGCGTTCATCACGATATAATTCATAACAA EMBV3_25595 CTGTCGGAAAGCTGATGTGAAGGGCTATTGCCTTATTTGTCTGTAAAAAGTGCAGCTCAG Gene GeneID:526469|MAP2K4:NM_001099038:54_cdna Constitutive 0 NULL GeneID:526469 19 GENE MAP2K4 MGC140244 mitogen-activated protein kinase kinase 4 EMBV3_14886 TACGACGGCTCGGCCGGAAGATGGACCGAGGGAGGCGCGGTTCCCTGTGGCTTAAAATAA Gene GeneID:509550|KLHDC4:XM_002694759:522_cdna Constitutive 0 NULL GeneID:509550 18 GENE KLHDC4 NULL kelch domain containing 4 EMBV3_06909 TGCTGCCCAGGGGACTGCTTCGGCTGCTGTGGTGAAGAGCAAGACTGCTGTGAAGTGTGT Gene GeneID:100297004|LOC100297004:XM_002695988:360_cdna Constitutive 0 NULL GeneID:100297004 19 GENE LOC100297004 NULL hypothetical protein LOC100297004 EMBV3_07381 ATCTTTCTGTTCCCAATCTGGGTCTCCGGATGGAATTATGAAGACTGAACTCCCCCGAGG Gene BVV0102_393956 - 1 EMBV3_19917 GK000019.2:34293643-34339884 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28718 CTGGCAGGTTACTAGCCCTTCACCCATGAACACACTGTAAATAAGGACATCTGAGCGCCT Gene GeneID:100335302|LOC100335302:XM_002689637:14_cdna Constitutive 0 NULL GeneID:100335302 8 GENE LOC100335302 NULL hypothetical protein LOC100335302 EMBV3_05522 TGTCCACCGCCTCCTCAGCAAAGACAACAGGTTCTAACGTTCCCATGGACCAGCCCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24007 TTTGTAAAGTGAGCGGATGAGCTAAGAGTCCAGTTTCTGGGGCCAGGTATGAGGCTAGAG Gene BVT0102_005577 + 1 EMBV3_26333 GK000011.2:71931588-71996673 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38398 GAAAATGGATTCAAAGATCCCTGGTGTTTCAAGAGCTGCAACCCTGGACGTCTGTGTCCC Gene BVT0102_153390 + 0 NULL GK000016.2:52456579-52464840 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33504 CCCTGGGCAGCGGGAGCTGCTGTAGAGATTATCCTCAAAGCTACCAGTGCTAATGAACAT Variant GeneID:509608|NHEDC1:NM_001077892:8_cdna 105^174 1 EMBV3_19909 GeneID:509608 6 GENE NHEDC1 MGC152004 Na+/H+ exchanger domain containing 1 EMBV3_23286 ATTCTTACACCTAATAATATTTGGGAGGGAGCAGTTCCTATTTCCCCTCACCCCTAGGGG Gene BVV0102_158765 + 0 NULL GK000003.2:7599668-7613748 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171829 TCONS_00168276 TCONS_00171834 TCONS_00171833 TCONS_00168275 TCONS_00171832 TCONS_00171830 TCONS_00171831 TCONS_00171835 2 XLOC_103925 XLOC_103043 Coding TCONS_00171835 XLOC_103925 Coding Coding ATF6 3:7608839-7843441 j TSS128094 7425 1 TCONS_00171835_3 718 17 0.968422981999224 0.00221435991196287 0.00141347493477136 0.00187399261998911 3.19163079137642e-07 2.15276641885529e-07 3.87342183502947e-08 0.000889766678986926 1.48178859164005e-07 2.15372899266868e-05 5.32658995582868e-09 3.64102940313188e-13 0.000104687946411379 0.00012433306457715 0.000279160699494943 3.81887057049305e-08 0.00574591748537081 2.30297175246953e-13 3.14151568066092e-06 0.000170825897504798 5.57079816797048e-08 8.03785235376653e-08 2.7813162349303e-06 5.17993548119631e-08 0.00224235924930527 5.58663452085214e-05 0.00205819045195282 0.000527456447978505 8.43107652138998e-11 6.91312991135084e-05 0.000467301879072162 XM_003581916.2 ATF6 PREDICTED: Bos taurus activating transcription factor 6 (ATF6), 0.0 1.254e+04 99.94 0.937777777777778 NM_007348.3 ATF6 Homo sapiens activating transcription factor 6 (ATF6), mRNA. 0.0 3169 85.20 0.373198653198653 TCONS_00171835_3 sp|P18850|ATF6A_HUMAN ATF6A_HUMAN Cyclic AMP-dependent transcription factor ATF-6 alpha; 0.0 1228 92.53 0.926183844011142 2 coding 0 0 1 1 -0.0362487241302086 0.800943436536779 0.0117454403077321 0.800051529668917 CAGCAGAACAGAAAATGTCGAAAACTCCAAAAGGGAAAAATACTAGCTCAGCGATTTGTTTAAAACTAGCTCAGGCTCTGGCGGCCCTCGTGCGGCGGAAGCAGTTTGTCTCCATTCGGCCACCGTCGCGACTAGTCACCGAGTTACTGGGCAGGGGAACGTGTGTTTCGGGGGAACCGGCTGGCGTTGCCGGCACCATGGAGTCACCTTTTAGTCCGGGACTCCCTCACCGGCCGGATGAAGACTGGGATTCTGCCCTGTTTGCTGAACTTGGCTATTTCACAGACACTGATGACCTGCAATTGGATGCAGCAAATGAGACTTATGAAAGTAATTTTGATAATCTTGATTTTGACTTGGATTTGATGCCTTGGGAGACAGGCATTTGGGACGTCAACAACCAATTCTGTACAGATATTAAGACAGAACCTCAGCCACTTTCGCCAGCCTCCTCAAGTTGTTCAATCTCATCTCCTCAATCAGTGGACTCTTACTCATCAACTCAGCATGTTCCTGAGGAGTTGGATTTGTCTTCTACTTCTCAGATGTCTCCTCTTTCCTTATATGGTGAAAGCTCCAACAACCCCTCCTCAGCAGAGCCACTGAAGGAAGACAAGCCCATCATTGGTCCTAAGAGCAAAACTGAAAATGGACTGACTCCAAAGAAAAAAATTCAGATAAATTCGAAACCTTCAATTCAGCCCAAGCCTTTATTACTTCCAGCAGCACCCAAGACTCAAACAAACCCCAGCGTTCCAGCAAAAACAATCATTATTCAGACACTACCAACACTTATGCCATTGGCAAAGCAGCAGCCAATTATCAGTATACATCCTGCACCTACTAAAGGTCAGACCGTGGTGCTCTCCCAGCCTACCGTGGTTCAGCTCCAGGCCCCTGGAGTTCTGCCCTCTCCTCAACCAGTCCTTGCTGTTGCTGGGGCAACCACGCAGCTACCTAATCATGTGGTGAATGTGGTACCAGCCCCTGTGGCAAACAGCCCAGCAAACGGGAAACTTTCTGTGACCAAACCTGTCCTACAAAGTACGATGAAAAATGTGGGTTCTGATATTGCTGTGTTAAGGAGACAGCAACGTATGATTAAAAATCGAGAGTCAGCTTGTCAGTCCCGCAAGAAGAAGAAAGAATACATGCTAGGCTTAGAGGCAAGGTTAAAGGCAGCCCTTTTGGAGAATGAGAAGCTGAAGAAAGAGAATGGTTCCCTGAAGCGGCAACTGGATGAAGTTGTATCAGAGAACCAGAGGCTTAAAGTTCCTAGTCCGAAGCGAAGAGCTATCTGTGTGATGATAGTTTTGGCATTTGTAATATTGAACTATGGACCCATGAGCATGTTGGAACAAGATTCCAAGAGAATGAATCCTAGTGTGAACCCTACAAATCAAAGGAGGCATCTTCTAGGATTTTCTGCTAAAGAGGAGCAAGACACATCGGATGACATCATCCAGAAAAACAGCTACAGATATGACCATTCTGTTTCAAATGACAAAGCCCTGATGGTGCTAACTGAAGAACCATTACTCTATATTCCTCCGCCTCCCTGTCAGCCCCTGATAAACACAACAGAATCTCTCAGGTTAAATCATGAACTTCGAGGATGGGTTCATAGGCACGAAGTGGAAAGGACCAAGTCAAGAAGAATGACGAATAATCAACAGAAAACTCGTATTCTTCAGGGTGCTCTGGAACAGGGCTCAAATTCTCAGCTCATGGCCGTCCAATACACAGAAACCACTAGTATCAGCAGGAACTCAGGGAGTGAGCTACAGGTGTATTATGCTTCACCCAGAAGTTACCAAGACTTCTTTGAAGCTATCCGCAGAAGGGGAGACACGTTTTATGTTGTGTCGTTTCGAAGGGATCACCTGCTGTTACCAGCTACCACCCATAACAAGACCTCAAGACCAAAGATGTCAATTGTATTACCAGCAATAAACATAAATGAGAATGTGATCAACGGGCAAGATTACGAAGTGATGATGCAGATTGACTGTCAGGTGATGGACACCAGAATCCTCCACATCAAAAGCTCGTCAGTTCCTCCTTACCTCCGGGATCAGCAGAGGAATCAAACCAACACCTTCTTTGGTTCCCCTCCAGCAGCCCCAGAGGCAGCCCATGTTGTCAGCACCATCCCTGAGTCATTACAATAGTACCCTGGGGCTACATTGGAGAACTAAGAATGGGACCCTGCCAGACTGGTGAGTGGGTGAGAGAAATGTTTCTTTTTGCCTCGGTGGCAAGCAGAGAACTGCCTCATAATAGAATTCCAGAGAGAGAAGAGGAAAAAACGAAGCTGCTCCATTTCTCACCATCTGCCTATCCACTTGAAGAGCACTGAAGCTGACACAAGGCAAGCAGCAGTTCTCTGGGGGCACAGGTAGCCCTGCATTCTTCACCGCTGCCTGGTGTAGATTTTTTTTTTTCCCTGTACTTTTCTAAATTACTTTTCCCTCTGTATTTGTTTTGTGTTTAAATAGTCATATTCTTTCAAATAAGACCTGCTTCCCCTCTCTGCCATTTCACTTATAGGTACCATACTTTGATTTAACAGCACACAGATGTTTCCACTGATTAGATCTTTCATCAACTTAATGCAAACCAATTGTGGATGCATGCTTATTGGAAAGCAAATGTCAGAACCAGCAGGGCCAAAAGCATCCCCAAGAGAGGCAAACCCTTTGGAGTGTTAGGTAAAAGGGAAGATCCTCCAGTGGCAAAGTTTATCTTGGGATTTGTGGTTCACACCTGAAACGCCATGAGAACAACTGTATTGCCGGGGGAGGGTAGTGAATTTGAGAGGATGAAATGGAAGAGACGGTGGTGGGGGTCTTTTTGAAAGAGGAGATAGCTCCATTAACACATGTATTTAAAACACTGAAAGTTTGATGAGACTGCAGTTTAATTAAAGCCATTTTCCTTCACTTGACTGAATCTCCACACACTACACACCTTCTAGTAATATGACCCAGTTCAAGTAAGGAGCATGTAGGTGACTTTAGATTTAAACAAACACGAGTTTTTTCTCTTGAGAATTGACAGGTATTTACTCCTTTAAGACTATGCACACAGGCAAATTAGATTCCTACTGGTGGAGTGCATCCCATAATATGGCAGTAATTATCAGTTCTCCAGTGAAAAGGCAGTGAAGGAATTTAATTCTTTTGTCCTCCCATTATTAAAAACGAAACAGAAAAATATCGTACTTTGTTCACTTGTACTTTACTTTCTTCTCTGTGATTTCTACCTTTAGCTTCAGAAATGGGTCTTTGACCCTCTCCTCCTCTGAAACTTTTCAATTTCTCGGTAGAATGCATTCTGCAAACACCGCTTCTTATCCTAATTGACTTGCTTTGGTCAGATTTCTTCCCTTCCATTCCACACTGTATCAGTCTCTTCCTCCCTGCAAGAAAAGAACAGAGAAAATATATCAACTCAAGGATTTATATGTAGCCAGTTAGTTTTCTGCCTGTGAAATTAGCATAGTTCCTAAATACTTCTGAAGACGCACCAGCACTTCTGTCTGGACAGTGATGCTTCTCTGTCTAAGTCAGTTAGATGCTTTTGGAGGAAATCAGTTTAACTCTTGTGAGGGGAAGTAGGGGGCTCTGTTGCTCTGTTCCCCGGGAATCTGGAGTTTGGGAAGTGTCAGTAGCCTCCTTTTCTGTATGCACAAACTGTTTTAAATCAGGGCAGCACTCCACTGTGATTTGTCTGTCCTGGGCAATTTCAGACAAGAGCCACTTCCCAGGGGACCACTCCTCCTTCTACTGGGCACCAAGAAAGAGAAGGCAGCGCCTAGAAGACCTTTAGGCTGCAGGCCATCTTCTCCAGGAGTGTCTTCTCCTGGCCCTGATCCTTCCCATTCTGTCCTGTGAATTATTCCAAACAAGAGGCTGCTGCCATGGCTAGTAGTCAGTGGCGACATGGTCATTCCCAAGCTGCCAGTCTTCCCCTGGAACTGAGGTAGTCATTACGGTGGATACACATGAAGTGTGCATGGAGTGATTATAGATGGTGCTTCCTTCCTGTCCTTTGCACTGAATCACACAAGAGCGAACCATCACGTGGAGTTCTTGGTTTTAGCACTCGCTTTTACTTTTTCCCTTCATTCCCAGCTTTTCCTGCGCTCATTTTACCAAGTGGCCAGACTGAAGGCTTACATGTTGCGTCCCCTGAATGCCTTTCAGGTGGGTTAAGTGTGGATTGAGAGTACCTGTGAAGTGCCCATAAAAAGCAGCCTGGGAGCCTTGCCTGCTTGCACTCACCGACCTTTCTGCTCCTTGTCATGACCTATTCTGCAGTTGATCTTTTTGAGAGGTGGGAACAGGATTCTCCTCAGGGTACAGTTTCAGGAAATGAGTGAAAGGCAACTGACAAGTGCAAAGAAATATACTTTTTAAACTACTGTCAAGGCTACTGCTAATCCCTGGGCATAATGGTATTTTTATTTTAACGCCTGTACGCTAGCTCAAAGTCCTTTAGGAAATGGAAAGTTGCTGTGCCTGATGAATAAATTAAGCTGTTTTTTTCCCCTAATTGTTGTGGTGAGATTGCCTTTTGGGGATGGCAACCAGGAATTATGGCGGATGTGTGGGTGTATATTTATTTAATTTTTTAATTTATTAAGTCTTTAAGTGGTATTTTGCAAATGTGTGAGGATATTAGATAAGGTCACGGAGAGGTCAAGTCCACCTGTTCCTAGATGGCTGTGCCCTTTGGGGCACTGGTACTACTCTCGTGGGAAGTGATGGTGAAGACTTCTGGGTGTTTTTCCCACCTGGTTGCGACTTTTTAAGGCTTCATGGAAGTAGATGTTCCCTTGTGCTACCTACTGAGTCAGATGTCAGGGGCTGCTTCCCCGGGGGGTTAACTCACTCAGCAGAACAGGGACACAGCTCCATTAGGACCACAGTGTGAAATGTCTCTTTCTAAAGTTAGGGTTTGTGAAAGGGTCATCTTGAAAGAAACATTGCTTGCCATCCTTGTAGTTTATGTTATTGGGTAGTGTTTGTCGTTTCACAAATAAGAAATTCCCTGTGATTATGAAAGCTCAGAGCATCTTCTAATTTAAAAAAAGAAAAAAAAAAGACTACAGGCTTCAGAACAAAGCTGGCATTTCTTTGCCTTCTCTTGTTAGCAAGAAGTAGACGCAGAGGTATTTGAAAGCAGCAATGTTACATGAGTCATTCCTGAGTGTTCTGAATAAACACTACTTAGAAACAGACAAGAAATTTGGGATTCAAACTGATTTTTCTAGCATTTTTAAAGAGACACTGTCCCGATTAAACTTTCCTGGCTTGAATCTGCCTCCCGGGAATGAACCCCCAGTAGTCACAGCAGTGACACTCTGATAAGACCCTGCTGCTGCGGCATCTGGAGTGATTAAAGCTGGAGAATTCTCAAGCTCTTTGCAGCTTTTGTACTATTTTCTGATTCTCACCATTTTACTAACCTCAGGTGGTGAAACTTGACAATCAGAGAGAAAAACTTGTAATTATATTTGACTTTCTAACACATTGCCAAGTTTCAAAGCAGCTTCCACTTTCAACTATTAGAAGTAACCACTTTTACTGAAGAGCCAGAGTTAGAGTCCATGCCCCCTTCAGTCTGACCTCATGGAAATTTTCCACCGTGAAAGCCCTCTTTCCACTGCACACTGCTGGGCCAACTCAGCTTCCTGTTTCAGAGTCACAGGACTCAACTTCAAATGAGACCTTGCGTACTATCCTATTGGCTGTTTTCATACAAATTAACCTCTCAAATAAGATTGCTTAATGCCAGAATTGATAGACATTTTTGACCCTCTATAGACCCCTCATTCTTTGCCAAATGCTACTTCTGTTAGTCTTGAGTCATTTTAATTTATAGAAATTAGGATCTTCGCTGCTAATATGAATGCTAATTATAACTTATACCTGAAAAGCAGAATAAAGCTTAAAGAGATAAAATGAAACGTAAGGAATTTTTATTCTTACACCTAATAATATTTGGGAGGGAGCAGTTCCTATTTCCCCTCACCCCTAGGGGTTGAGATTAATTTTTAATTTTCTAGGAAATAGAACATTGGACTACCACCCAAAATGTTGCCAGAGTCCAGATGGAACTGTGCACATTAAAAAAAAAAAAACACTTTTCTCTTACCTGAAGAAAGAGTCTGTTCTGTTAACATATTTTTAATGAGTAAACTTAAAATAAATTTTATTTTGGACAAGACTAGGACTTTTCGCAGTTTATTCTAATACCTCTGTGTTAATATCTGTCAGGTTTTCTGTGAGAACTTATGAAAAGAAGATGAGAAAGGCATCTGGATCAGGAAACTTGTCCTGTGTGTGAGTCAGGTCATGGCTAGTCACTGTCAAAAGTGGGCACCATACTCAACATAGTGGTTTGCTACCTTGAAGCCTTAGAGACTCAGCACATTAAAAGGCTTTTAATTATATTAAATGGGGAACCAAGGAGTAAATAAAGCATAGTTGACCGTTTCCAAGGTCAGCAACAGTGCTGCTTGCCCCCAGTGATGCTGCTGACCGTTAGTCAACAAGCAGACCTGGAGGCTTGGCGTCTTGCCCGGCAGGACCATCGCAGACAGTTCAGTGGGCTGACTTTCGTGACAGATGTATATTGGACCCTTTTAACTCGCACTCAGCCCTCATTTCTAGGTCAGTCATCTTCATGAGAGAGAGTGGGGGAAATAGAACTTTAGATGGAAACTGCTCTGTACTACTGGCCTTAGAGATACTTGTCACTTGTCATCACACTGGCAGTATGGTTAGTCTGAGACCGGTAGTGCTGCTCCCACGGAGCCATTAGAACCCGAGGAGAGAGCATCAGAGATGTCGTTTCACCAGGACTTTCTTTGTAAGGTTGTATCGGTGCTCGGTTAAGAATGGGTTAAAATATGGAGGAAAGATGTACCATTTTCTCCCTTAAATTTTTTGTTTTGTTTTGTTTTCAACACATAAAGAAACAATGACAGCAGACTATGATATGCTTTTAAGCAAGTCTTTATGATGCAATACTTGTTCTTTGTCTAAACTTCAAATAAAGAATTTTTAAACTTGCTTGGTTTTGTTCTGTATGTAGAAAGAGAAAAAAAAAAAAAGACCCAAAATGAATCTGTAGTGTTAAGTGATTAATAATGAGAAGGGAAGCCTGACATGGTTTCGTGGCTTGTCACTGTTTAGATGAAACAATTGAGCTCTTTTCCACTCTTCTTCCCAACCTGGTTAAGTAAAAGTTTCCTTTATTGTGTCCAAATATTTAAACTACAGTCTTACTAAGGGGAAAAACAATTGTCTAAGAATTCATCCTTTGACATTCTACATTAGGAAACCAAGTTACTCAATCACACCAAAGACCTCTTTTCAGCTTGGAATGACATGTCCATGAAGCTGGTCTCTGCAG EMBV3_17315 CTTCAGTCTGTGTCTTTGTATATAAAGGGTGTCTCTTATAGGCAGGTCAAAATTGGATCC Gene BVV0102_083691 - 0 NULL GK000021.2:37273809-38276191 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119352 1 XLOC_072881 NonCoding TCONS_00119352 XLOC_072881 NonCoding NonCoding - 21:37969576-37992168 - TSS89402 5680 1 TCONS_00119352_2 143 0.881514084507042 3 0.748705236598646 0.000543749771121338 0.000324628698688089 0.000259404744960831 0.000358676910388999 0.000203289454525178 0.000219472519497873 0.00019849703584422 0.000314202060320326 0.000400063462636729 0 0 1.0791815161759e-07 3.0309330957445e-06 2.33070345862646e-05 8.63769018162462e-07 1.16248122265966e-06 0 0 0.000503732465435294 0.000409371106583632 0.000237834763183042 1.45161863005028e-07 0 3.27945893383175e-07 0.000581082502893374 0.000362817238809201 0.000201665934714103 0 0 0 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 0.0 893 94.91 0.1 0 noncoding 0 0 0 0 -0.0615493090865503 0.677300611195742 0.0237954234065695 0.63900736902247 AGCAACTAGCCTAAGCAATAAGCCATTTGCCCAAATTGTTTTCCAGAAGCTTGGAGTCAGCTGCATCTAGTTCAAGATGAGTTGATTGAGACTGGATAGGACCACAGACCACTGACCCTTCAACTGGGCATGCTTGGTGACCTTTTGAAATGCAGAGACCTGTAACTCAGAAATTCTCCTCCTTACCTTAGAAGCTCTGATGCTGGAAAGATATGAGAGCTCGTCTTTGGAAATGTTTAAAATCATCAGCCAAGGTTCGAGTATACAGATGGTGACTGCAGCAATGAAATCAAAAGACGCTTACTCCTTGGAAGCAAAGTTATGACCAACCTAGACAGCATATTCAAACGCAGAGACATTACTTTGCCACAAAGGTCCGTCTAGTCAACGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAGGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGAAGATCCAACCAGTTCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATACGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGTGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGACGTGAGTCTGGGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCGCAAAGAGTCGGACACGACTGAGTGAATGAATTGAACTGAACTGATTGACCTAATAGAATGAGTTGGGATATAGTTCTTCCTCTTCTTTTATTTGGATGATAACGTGAAGATTACTTGAAAAATTGGTGTTGATTCTTTAAATGTTTAGTAAGATTCACCAGTGAACCATCTTGATGTGGGTTTTTCTCTGTGGAAAGTTTCTAAATTACAAATTTAATTTCTTTGTTTGTTACAATTTATTTCAGGTTTCATATTGTATATTGAGTCACTTTCAGTAGTCTGTTTCTAGGAAAATTTCCTTTCTACTTTGTTGACATACAGTTGATTATAGTATTCTTATAATTTTTACCTCTATAAAGTCAGTAGTAACAACTACTTTCTAAGTACTTATTTTAGTAGTTTGATTACTCTCTCCCACATTCTGTCTCTCATTCTTTGGTTCAATAATGAAAGATTAGTGAACCAACTTTTGATTCCAGTGAATTTTTTTTTTTCTATTTTCTGGTTTATTTCCATTCTAATTTCTATTATTTCCTTCCTTGTACTTACTTTGGGCTTACATTGCTTTTTTACTAATTTATTAATGTGGAAGGTGAAGTTGATTAGATATCTTTCTGTTTTATTCATGTGTGTGCTCCATTGTGTCTGACTCTTTGTGACCCCATGGACTGTACAGCCCACCAGGTTCCTCTGTCCAAGGGATTATCCAGGCAAGAATACTGGAGTGGGTTACCATTTCTTCCTCCAGGGAATCTTCCCAATCCAGAAATTAAACCCGTGTCTCCAGCATCTCCTGCATTGCCGGTGGATTCTTTACCAGTGAGGCACCAGGGAGGCCTCTCGGTATTCATAAATAATAATTCTCTCCACACATAGTTTTAAGTGAATTCCTTAATTTTTGTCATGTTGTATATTCATCTTCATGCATCTCAAAGTATTTTTTATTTTTCTTTAACCCACTGGGAATTTGACTACATTGTTCAGTTTCTACACATTTCTGAAATTCTCTAGTTTGTATGTGTTATTTCTAATGTCATTTCACTGTAGTAAGAGAACACATTTTTCATGATTTATGCCATCTTAATTTTGTAATAAATAGCACTTTACATTTAGTAAGGCTTCCTTTATGGCCTAATATATGATCTATATTTGGGAATGTGCTATATGTGCTTAAAAATGTTTACTTCTGTTGTTGGGTGAGTGTTTTATAGTTGTGTCTTAGATCTGCTTCGTTCATTGTGTTGTTCAAGTCTTCTGTTTCCTTGTTAATCTTACGCTGAGTCTTGCTCTCTATTATTCAAAGTGGAGTATTGAAGCTTCTCCAACTACTGTTTAATTGTCCATCTATCCCTTCATTTATGTCAGTTTTCAATTCATGCATTTTGTGGGTTCTGTTACTAAGTACATATGTGTTTATAATTGTTATGTCTTCTTGATGATTGGTCCCCTTTTCACTGTAAAATGTTTTTTTTTTTTTCCTAGTAACAATTTTTGCCTGAAAGTTTATTGAATCTGAAATTATCAATAATATAGCCACTTCAACTCTCTTTGGTTTATTGTTTGCATGATATATCTTTTTCCGTTCTTTTATCTTCAGTCTGTGTCTTTGTATATAAAGGGTGTCTCTTATAGGCAGGTCAAAATTGGATCCTTTTTTAAAAATTCAGCCAATTCTTATCTTTTGTTTGGAATGCTTAATCTACTTACATTTAGTGTAATTACTAATATGATAAAGTTTAGATCTGCTCTTTTGTAATTTGTTTCTATGTGCCTTATATCTTCATCAGTCCTCTATTCCTTCATTACTGCCTTCTTTGATGCTAAATAGATATTTTTCTTGGGTACTATATTCATTTCTTTGTTGTTGATTTATTGTAGTTTGATATATCTTTTAAAATTGTTGTCTGAGGATTACAAGTAACATCTTAATTTATAATAGTCTAGTTTAATGTCAACTTAATTTCAATACTACACACAAATTCTGTGCCCAGAAGCTAGATACAGAATTCTTGGTTAATATCCCCTTTCAGACTTTGCCTTCTGGCTTCCACTCTTGCTGATGCAAAGTCAACTCTTAATCTTATTGAAGATACCTTGTATATGATTTTTTCCCCTCTTGCTGACTTCAAGATCCCTTCTGTATTTTTGACCTTTCACAACTTGACTAGGATGTATTTGGGTATGGATATCTTGAGTTTAACCTATTTGAAGTTGATTGAGGTTCTCAGATAATGCAGATGAATATCTTTTATCAAATTGGGAAAATTTTCACTTTCCCATGATTAGAAACATCATGTTTCTAATGTTCTTTCTGTTCCTCTTTTCTGGACTCCACTTCTTGACTACTATTATGCACATGTTGGTACATTTCAAGGTGTTCAAGAGTTCTTTGAAGTTGGTTAATTTTATGTATTCTTTCCTCTTTCTCTTCCTCAGAAATAATTGAAAAAATCTTAATTGACCTACCTTCAGTGTTAATCTGGAGAAAGCAATGGCACCCCACTCCAGTACTTTTGCCTGGAAAATCCCATGGACGGAGGAGCCCGATTCACTGCAGTCCATGGGGTCGCTAGAGTTGGACGTGACTGAGTGACTTCCCTTTCATTTTTCACTTGCCTGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGTGTTAATCTCCTGTCAGCTTAAATCTGTTTTTGAGTATTTCTAATGGATTTTTATTTCAATATTTAATTGTTTTTACCTCTTGATATTTTGTATACAGTCAGATATTGTTCTCATACTTTTCTTTAATTCTTCAGACATGACTTCCTTTACTTTTTGAAAGTATTTATAATAGCATATTTATACAATTTTTCTAGTAAGTCCAACACCTGGTTTTCCTAAAAGATAATTTTTTTGTTGTTGGATTAATTTTTTTTCTTTCTTTGTATGGGCCATACATTTTTTTCCCCTTTGTATATTGCATATTTTTAAATAGGAAACTGAATACTTGAAATAATATGGATACTCTGGAAATGAGATTTCTATTCATCATCAGAGTTTGTTGTTGTTATTTGTCAGTGATTTTCCTAGATTAATTCTATGAAGCTTATATTTTTTGTCATGTGTGGCCACTGAAGTTTCAGCTAACTTAGTTGTCAACTAATGATGGAATAGAGATTTTATTAAATGCCTTGAACCGGTAAGTCTCCCAACCTTTGCAGAGAGGCTTTCTGTGTTTGATGGGGTGTGATTTTAAGTCTCCTGCTGAATTTTATGCCTTATCCTTCATTTCTAGATTGTGTAGATCCTCAACTAGAGGTGAGAGGTTAGGAAACACTTAGGTATTCTGGGACATAAACACATACCCAGGAATAATTTGGAGCCTATCAAAGCCCCATATAGACATCTCATAATACATATTTTCCTTTTAAGTTCTTTGGCTACACTCTTATTTGATTAAACCAGTGTCACTTTGTCTGGCAACTTCAAGAGTAAACAGTTGATGCTGGTTGTTTTTGGCAAACACTCTAGGGTAGAGTTTTCCCACTAGAAAGCTCCAATTCAGATCAGATGAAAAGCTTTGTGAGGGGAACTTTTCCTGAGATCTACTAGATAAATACTGCAAAGTGAAAGAGACTCAGTTGATTTTGATTCTTTGTGACCTGTGGACTGTAGCCTACCAGGCTCCTCTGTCCATGGAATTCTCCAAGCTAGAATACTGGAGTGGGTAGCTAATTCCCTTTTCCAGGGGATATTCCTAACTCTGGGATCAAACCTGGATCTGTTGCATTGCAGCTGATTCTTTACCACCTGAGCCACCAGGGAAAACCCAATACTAGATAGATAAACTGGTGACAATTCTCTGTGTCTTTTATGGCAGCTCCATGTCCATTAGACGGCTGGTTTTTAAGGCTACCACAGAGCTGGCAAGAGGAAAATATGATAGGGCAAGTTAAAACATCATATTTATTGTTCTTACTGAGATTTAGCTGTTTTTTTAGGTGTTTTTTTTTGCTATTGTTTTTTTGGTTTTTGGTATAAACCCTTCATGGATTTTTAAAGCTTCTTTTGATTTCCAGAATTTTGAAAGAGCTGATTTTGACAAACTTTTTTTTTTTTTTTTGTCTTCTGCTTGGTTTCTACAAAGGAACAGTTTTTCAGAGATCCTTACTCTGCCATTTCAGAAATGCTTTCTTCTTCTTAACCTAATTCTAAAGCAAGGAATATTAAATCTCTCACTACATGTTGGAATTTGATATTATCACTATCAGGCTCCTCTGTCCATGGGATTTTCCAGACAAGAATACTGGAGTGGGTTGCCATTTCTTTCTCCAGGGGATCTTTCCAATCCAGGGATCAAAACTGGGTCTCCTGCATTGTAGGCCAATTCTTTACCAACTAAGCCACCAGGAAAGACCTACTACATGTAGCAATTTGATATTATCATTTGAATTGCATTAATAGGAAACAACTTGGTAAATGATTCAGAGTAAACCTTATTCCCAGTGTTGGATAGCAGGACATATCTACTTATGCTCTGGTCTAGTTCAGGATCACTGTAGTTGCTCCATGACTTCACAGCTCCACAGTACAATTTCAGACCTGCATTGACTACTCAAAGTTATAAAGAAAAGTTCTGATTTTTCAGTAGTATATTTTAGGCCTATCATTTTAGTGCTTTAAAATATGGACTTGTGTTTATCTAAATTTCATAGATTTGTATTTTATTCTCAGTATTAATTAGTGTAATTAGCTCTAAGTATCTATGAAATCTTTTCTTAGACTATAAATTCTTTGAAGATTGAGTCTTCAGTGTGT TCONS_00121186 r 3' 284024 TCONS_00121186 r 3' 306615 EMBV3_33820 GCCGAGCCTGCTCCTGTAAGTAAAGAACAGTCCAGACGCAACAAAGAGGAATCTGGCCAT Gene GeneID:505125|PAK1IP1:NM_001014852:196_cdna Constitutive 0 NULL GeneID:505125 23 GENE PAK1IP1 NULL PAK1 interacting protein 1 EMBV3_14394 ACGGTTGATGGTCACCGTTTTCCTGCCGAGGAAGGCCCAGAAGAAAACAGTGCCTATGAA Variant GeneID:511923|CA9:XM_002689698:152_cdna 798^890 2 EMBV3_23139 GeneID:511923 8 GENE CA9 NULL carbonic anhydrase IX EMBV3_02706 CTACTCTTTCTTCCAGGGATGTTTTGGAGTACTTTGGAAACCTGGTGCAGTAGAGAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06398 CAAAGAGGGCCTGCCATAACGTATCCTAAGGATATAAATATGATACTGTCGATGATGAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14107 AACGGCTACGTTGGCAGCAGCGCAGGAAGCTAATATTTTTAAGCAGATCATCCTGGCAAC Gene GeneID:327705|ASAP1:NM_175821:8_cdna UTR3_Alt 2 NULL GeneID:327705 14 GENE ASAP1 DDEF1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 EMBV3_06147 GTTAGGCCTACAACACAGAACACGGGGGTCAACAACCAATCACTAGGCTGCCTTTGGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04630 CTGAATGAGAAACATGAGGGAGATTGTGGGTTTAGCCTCCTGTGGGATAGAATCTGAGGG Gene GeneID:281960|POSTN:NM_001040479:17_cdna Constitutive 0 NULL GeneID:281960 12 GENE POSTN MGC128214 OSF-2 periostin periostin, osteoblast specific factor EMBV3_31598 GACATGCTCTTTCTCATGGGACTTGAAGTGGACTCATCTTTGTGCAGTGCTGGTTCTGCC Gene BVT0101_002747 + 0 NULL GK000024.2:54786433-55056408 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143475 1 XLOC_087897 NonCoding TCONS_00143475 XLOC_087897 NonCoding NonCoding - 24:55050835-55053126 - TSS107686 2291 3 TCONS_00143475_5 52 1 0 0.000219733996597214 0.000530712506996324 0.00020600247310381 2.53727256992796e-05 4.09456020539465e-05 3.59111060409041e-05 0.000285094789000142 0.00012650419921096 0.000444272177327419 2.15512557855194e-05 2.5979395078776e-05 0 5.51062051626968e-05 0.00064677364288975 0.000138841436886506 0.000299738414425475 7.24674973889475e-06 0 0.000300484408686128 0.000419055346701671 0.000492924952941166 0 0 0.00032929292838153 0.000880046614817542 0.000959487363471439 0.000144496672746739 1.25777591914509e-05 4.23798139570543e-06 0 XM_005211659.1 TCF12 PREDICTED: Bos taurus transcription factor 12 (TCF12), transcript 4e-17 95.1 75.47 0.0663465735486687 NM_001243226.1 TCF4 Homo sapiens transcription factor 4 (TCF4), transcript variant 3, 0.0 3115 90.52 0.993452640768223 0 noncoding 0 0 0 0 -0.407323538257766 0.469981440011287 -0.0932618158461056 0.17959141014736 ATTTAAAACACACAGTAAGAACATAAGAACATCTCAAATCATTTAGAAGGAAAAAGGGCTTATCAACCAAAATCTTTGGAAATTTCATAAAGTTTAAATATCTGCAAACAATCCAGAGGGGGAAAAAAAATCCCAACATTTGGCTATGGAGGGCATCTCATGTGTGAACCAAATGGCGTTATCCCATTTTCCTTCAGGCAAACTAGTCACTAAACCCCATTAGAAAGAGTACAACAGCGATATGGAGACATCCCCCAAAACCACATACTGGATTTAGAACATTCTGTGATGAAGCATTTATCTAATCACGGGCTTTCTTTCCATTGCATACATGACTTTACATTTCTACAATGCAATGTTGAAACAGCCTCCAGGTTTTGCAAAGGAGATTGATGTCCATTCTACAAAAATATTAAGTTACAGTACATCACACTGAATAATTTTAGTCTGTACATTTTCCCCCCTCCCATCATAGATGACACGCATCAGTTTGTACAAGTTAGAAAAAAGCCCGTCTGGTTGCTTACATCTGGATTAATAGTCAACAGAATCAACCAGAAGTAGTGGGGTGGGTAAAGTTTGAGAAAGTATCAATACAGTGGGATATTAATTGTGGTTAACAATAGTCAATTCTTCACAAAGTGATACAAAAGAAATCATTTTAGAATTTTGACTGAAAAGATCTAGCTGAGGAGGTTCTGGCAAACAGTTGACCAACTGATCCAAAAGTTTAAGGCTGACTTGACTTAAGCTGCAGCCCACCCAAAAACACTGGCAGCAATGGCGCAGTTCAAAGCTCTTCACATGCACAGCTTCCGTGATAACACGTATGTTAATTAATTCCTTCAATTAGTTAATCCTCTAGACAGTTTTCTTTTTGTTTTGCATGCATCTGGTTCCACTTTCATTAAGGGCATCTCTTCCTTGGTCAATCATGTGCTTTGCTTTTCAATTTGTTTTTATGATTTTTTTTTTTTTTTTTGGTATGTTTTATTTGTTAAGCTGTCAGTACCTCCAACACTTGGAAAATGAAATCTAGCTGCAGTTTTGCTTACAGCAGAGAATCAGAGCTCTATGGACAATGCAAAATGAAATGAAACAAGTATCAGAAACAGTTTATAAAAATGGCACATTTATTGCTACAGAACGGTCATGTACATGACTTCATCGAATAACTACAGATGGGAAAACAGGTAATGGCCTAGACCAAGCTGGGTTTGTTTTTGTCTTGAAGGAACTCCAGCACACAACCTGTTTGGACACTTCTACAAATCAGAAATACACCAAAAACATGAAAAAATCGAGGCACTCAGCCACACATTGAAAACAAGGTGTAACTGTTTATCTTTTTTTTTTTTTTTGAAGTGTTTTCCCTTTTTTTCTTTTTTTAACAATTTTTTTTTTCGTTTTTAATGCTGCAGCTATGTGTACAGTCGCAAAAATTTTCCCCGCTGCGACCTACAACTAAAAAAAAAAACAAAACCAAAAAACAAACAAAAAAAGCTACCATACAGTTTCATCTCAGTAACACATGGTAAAATAACATCTTTTAAATAGTAAAATAAAGTAACAAACTTTTACTCATAATGATTCCAAAAATCTACAAAGAAGAAATATTCAGAATCTGACAATTTTTTTTTTGTAATATTCATGGTATAAAAGGATTGCTCCTGCGAAAAATAAGCCAAATATATTTTTTATTTTTAAATTTAGTTTTTTTTTTTTTTCCTACTCGGGTGTACTACGGTCTATTTTATAGCAAAAAGAGCACTAGACAAACAAAGCTTTATAACAAAAAGCCAGGCACTGATACATGGTAAGTCTCTGCTTTTTTTTTTTTTTTTTTCTTATCTTCACTTAATTGCATCACAAGTAACAAGAATGAAAAAGGCCACAGTTCATATATTTTCACCATTACATATGTCTATAATACTTGAAATGAGTATGGCAGAACCAGCACTGCACAAAGATGAGTCCACTTCAAGTCCCATGAGAAAGAGCATGTCTCTAAAGAAAAACAAACAGAACCAAAGCAAATAAAGAGAGGCCTAGAGGCCTTGGTGCCCCATTGTGTTGGAATTCCTCATATTCCATCTTGACTTTTTTTTGTTTCCAGTCAGCCAGCAGACTAAATTTTTGTGCTTGTTTATGCTGAAATGGTTTCATTCCTGACTCAAGTTCACTTTTGGACACAGATCATATTCTGCCTGTTGGATCCAAGACGAAAATCCTCTTAACCCCAAGTCTTGGTTCAACACCCTCCCCACCCCCACCCCCCCCAATCCCTCATC TCONS_00140625 TCONS_00140623 TCONS_00140624 TCONS_00140626 TCONS_00140627 TCONS_00140628 . 3' 80 TCONS_00140625 TCONS_00140623 TCONS_00140624 TCONS_00140626 TCONS_00140627 TCONS_00140628 . 3' 2370 EMBV3_28482 TGGCCCTCGATGTGCTCTGCGTGTTGCTGGCTTTACCTTCAAGCCAGAATGAAGGGAGAC Variant GeneID:617172|PPAP2A:NM_001080329:7_cdna 444^934 3 EMBV3_36245 GeneID:617172 20 GENE PPAP2A MGC133873 phosphatidic acid phosphatase type 2A EMBV3_16085 CTGGGAGAGTAACACTAATTGACAGTGCTCTTTTCTTCCTGTTTCAAGTCATTTGTTGGG Gene GeneID:509739|WRB:NM_001034359:27_cdna Constitutive 0 NULL GeneID:509739 1 GENE WRB MGC128479 tryptophan rich basic protein EMBV3_38869 TGGAAATACATCCAGATGAGCATCGACTCCAACATCAGCCTGGTCCATTACATCGTCGCC Gene GeneID:535038|TMEM147:NM_001034624:691_cdna Constitutive 3 NULL GeneID:535038 18 GENE TMEM147 MGC127848 transmembrane protein 147 EMBV3_42470 CGTCTTGGTTTTGCCTCATTGCATGACAGCCCCTCCCTGATGCTGTTCCTCGTACATGCA Gene GeneID:515804|IPO9:NM_001105376:136_cdna Constitutive 0 NULL GeneID:515804 16 GENE IPO9 MGC151504 importin 9 EMBV3_22677 TTCTTCTTCGAGAACTACACCGGGGTGCAGGCCTTCCAGTATTAAAACATGTGCTGACAC Variant GeneID:530414|AGPAT5:NM_001075932:8_cdna 349^715 3 EMBV3_16587 GeneID:530414 27 GENE AGPAT5 MGC142713 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) EMBV3_43634 ACATGCCTTTGCACTCTCCCTGCCTCACTATCCCTGCGTTTTTACTACTGCTTTTTGGCC Gene BVV0102_068084 + 1 EMBV3_26682 GK000007.2:73952037-74035570 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09217 AGCTGCTGGTATTCGGCTCCTCGCTGCAGTCTTGAAACAAACAGTTCTTACTTCCTCGCA Gene GeneID:784816|LOC784816:XM_002691036:417_cdna Constitutive 0 NULL GeneID:784816 10 GENE LOC784816 NULL hypothetical LOC784816 EMBV3_19868 CTGAAATGCACACGCTTCAGCATCAGTCTGAAGGTGCTTCCTGGAGGGGCCTGCCCCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33356 CAGGCGGCGATGCTGAAGGTGGCGCAGATGGTCTTCGGCTTCCTGGCCACCTTCCTCTGC Variant GeneID:532269|CMTM7:NM_001075960:146_cdna 183^455 2 EMBV3_37376 GeneID:532269 22 GENE CMTM7 MGC140576 CKLF-like MARVEL transmembrane domain containing 7 EMBV3_32424 TGAATTTGGTGAGAGAATCCATCTGAACAGCCAGTTTCCAGGCGCCGAGCGGCTCCCCAA Gene GeneID:790815|SCLY:NM_001083804:26_cdna Constitutive 1 NULL GeneID:790815 3 GENE SCLY NULL selenocysteine lyase EMBV3_13346 CACTGGCCTTCTGGGGGACACGATGGAGAAGATCGCATGGCAGAAAGGGGGCATTTTTAA Gene GeneID:505809|FPGS:NM_001024480:34_cdna Constitutive 1 NULL GeneID:505809 11 GENE FPGS NULL folylpolyglutamate synthase EMBV3_33233 TTTAGCAGGAAAACCCGTCTCTCCAGTCATCAGAAGGTCCACTTCACAGAGCAGTCCAAC Gene GeneID:786262|ZFP57:XR_084047:354_cdna Constitutive 0 NULL GeneID:786262 23 PSEUDO ZFP57 NULL zinc finger protein 57 homolog (mouse) EMBV3_40013 GCCCGAGGGGGGACACTTTATTCAGATGGATGCACGATCTTCCCTTCACACACGTTTTTA Gene GeneID:532690|OSBPL5:XM_002699428:106_cdna Constitutive 0 NULL GeneID:532690 29 GENE OSBPL5 NULL oxysterol binding protein-like 5 EMBV3_05137 TGCAGTTTTGAAGGCTGAGAAGTCCAAGATGTGCAGTGGGTGAGTTGGAGCCCCAGGAGA Gene BVV0102_116991 + 0 NULL GK000030.2:83536491-83572298 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23397 GAGCTGGGATCGGGGACGCACAGAGGTCAGGCTGCTTTTGCTGTGCTATGGAGACAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31526 TGGGCTTCGGGCAGCCTGATGGGGAATACTGGCTGGGCCTTGAACCTGTGCATCAGCTTA Gene GeneID:521472|ANGPTL6:NM_001128070:62_cdna Constitutive 0 NULL GeneID:521472 7 GENE ANGPTL6 NULL angiopoietin-like 6 EMBV3_23434 CAATGTGTGCGCCACCAGGAAGGAATCAGAGTGACTGGCCAAAGACAACCCGGAAACTAA Gene GeneID:540744|ZYG11B:NM_001102247:109_cdna Constitutive 1 NULL GeneID:540744 3 GENE ZYG11B MGC166395 zyg-11 homolog B (C. elegans) EMBV3_11507 AGACAGCGAGGGCGGCCGGGCCGGCCCCAGGGGGAAAAGGAAGCGGTATATTTGACGAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08447 CGGAGCTCCAGCAGGCATGTCATTCACTAATGCCAAGTTGTGTTGGACTCTGAAAAACAA Gene GeneID:535674|RIMS2:NM_001102190:35_cdna Constitutive 2 NULL GeneID:535674 14 GENE RIMS2 MGC159469 regulating synaptic membrane exocytosis 2 EMBV3_39368 TCTGGCCTGCTGAAACCTTCCTCTAAGCTCAACATCGTCCTGCCCAGCCCCACAGCCCAA Gene GeneID:522469|BATF2:XM_002699337:199_cdna Constitutive 0 NULL GeneID:522469 29 GENE BATF2 NULL basic leucine zipper transcription factor, ATF-like 2 EMBV3_16979 AAAAGTTGTGGAGTGCATTGATCATAAAGCTTTTGCACAGTAATAAGTTGACTCACACAG Variant GeneID:613808|CLK1:NM_001102271:137_cdna 541^824 3 EMBV3_33163 GeneID:613808 2 GENE CLK1 MGC148790 CDC-like kinase 1 EMBV3_43339 GACACCAAGGAAGATGTATTTGTACACCAGGGTGCGGAGGCAGCAAATGTTACAGGCCCT Variant GeneID:287023|YBX1:NM_174815:32_cdna 405^494 1 EMBV3_07534 GeneID:287023 3 GENE YBX1 MGC127824 NSEP1 YB1 Y box binding protein 1 EMBV3_11044 GGCAACCTCTGCTTCAGCCGACACAGCCGACTGCTTTTGGGGATCTAGGTAATTATTCAT Gene BVV0102_127531 - 1 EMBV3_07795 GK000027.2:17503112-18071594 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155118 TCONS_00155123 TCONS_00155116 TCONS_00155117 TCONS_00155119 TCONS_00155121 TCONS_00155122 TCONS_00155120 1 XLOC_094647 NonCoding TCONS_00155123 XLOC_094647 NonCoding NonCoding LOC100848092 27:17784027-17786392 = TSS116134 802 1 TCONS_00155123_2 80 2 0.661590524534687 0.00420638325055325 0.0013893701615233 0.0017163193428904 0.00110318000216031 0.00460194837578356 0.001642191808485 0.00332111180092319 0.000941146102507834 7.68397162095506e-05 0.000741151033860397 1.63293678071003e-05 5.7973349403106e-05 0.000273692112045924 0.00219098014055622 0.00163749783391312 0 0 0 0.00390861797102222 0.00407245897964519 0.000692218969479338 0 0 0 0.00612871971695073 0.00358024184438591 0.00141845958037581 0 0 0.000313791028691633 0 noncoding 1 0 1 0 -0.472276755352929 0.0996951930517754 -0.00336663004412109 0.95104158403725 GTACAAAGAATGACAAAACTCTCTTAAGGCCACTTGGTTTCTCAGATTCTCAAAGGGAAGAAATAATGGATATTATTTAATAACAGAATTTCTAGGCTTAGGGCTGTGCGTTTGTGAGGAGCCCCAATTCATATTTCCATGGACCAAAAGGGCCCCTTTCCCACCAACGTGTGAAGCAATGGGAGGTGAGACCTCACCTTAAACACCAAGTATGTTCTCTGATCCAGCATAAAAAAGGCCCTTGAAATCCTTTTCCCCAGACCGCCACACATGTTGGTGGAAGGTCTCTCCTTTACTCGATGCTCAAACTGTCGAGTCCCTCGCTGCATGACCTGCTCCTCCTCTTCTGCTGAGGCCAAAATGTGTCAAATGGACAGATGGCTCTGCCAGAGATAGTCAGATTTTGTCAAATCAAGAAAATTAAAGCCAGGCCCTGTCATAAAAACACAGCTTATGGGTCTGCCGGATGCACCAGCGAAACCGGTCTCGTTCACAGCTGCACTCCCTCCTGGCATTTCAACGTTGGCCAAATGTTGATTCGAAGCATAACTGACTCAGAAATCTCGCAGGCAACCTCTGCTTCAGCCGACACAGCCGACTGCTTTTGGGGATCTAGGTAATTATTCATTTGACCTTGAAGTTTTGACGACTTTTATTTGTTATGAGCCCATGAATTCAAGATCCAGAAAAATGGTCATTACCCTTACACTGCATTCAAGCACATTATAGAAACAGAAGCGGTGGTAAATATAACACACCAAAAGTTACGGGCTTGCTACTGAAGGGGCCCAGACAGCATCAG EMBV3_25480 TCCTCCTCCACATAGTCTGTCCTGCTTCACACAGCGCTTATCAAAGTCCTGCTGGCAGAA Gene BVV0101_056074 - 1 EMBV3_06198 GK000020.2:66419875-66568769 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11823 GGAGATTGAGCTACAGTCCCAACTAGCCCTAAAACAATCCCTGGAAGCCTCCTTGGCAGA Gene GeneID:281888|KRT10:NM_174377:27_cdna Constitutive 0 NULL GeneID:281888 19 GENE KRT10 NULL keratin 10 (epidermolytic hyperkeratosis; keratosis palmaris et plantaris) EMBV3_05849 AACCTTCCAAGGCGCTTTTTTGAGGAAGCAGACTTCTGTGGGAGCCATATCTAGCCAGCA Gene GeneID:523454|LOC523454:XR_084729:65_cdna Constitutive 0 NULL GeneID:523454 X PSEUDO LOC523454 NULL similar to Protein WWC3 EMBV3_43755 GCAGTACTTTAGTCTGATGAAGCTCTGCAGAAATAGTGACCGGAAACAAACTGCTGCCAA Gene GeneID:512408|RAD21L1:XM_002692275:1613_cdna Constitutive 0 NULL GeneID:512408 13 GENE RAD21L1 NULL RAD21-like 1 (S. pombe) EMBV3_11080 ACTGGGTGTGAGGATTCCCACTGTGGCTCTGCACATGACAGAACTCTTTGACACAGCTAT Gene GeneID:531017|AHSA2:NM_001102134:104_cdna Constitutive 2 NULL GeneID:531017 11 GENE AHSA2 MGC152531 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) EMBV3_07505 CACCCCCCAGGCAAAAGAGCGTGTCTGTAATCTGATTGATAGTGGAACAAAGGAAGGAGC Gene GeneID:327692|ALDH6A1:NM_175811:38_cdna Constitutive 0 NULL GeneID:327692 10 GENE ALDH6A1 NULL aldehyde dehydrogenase 6 family, member A1 EMBV3_29293 ATTCTACCGAACCCGCGTGTGTGTGCAGTGCGTGAGCGCGAGCGTTTTCTACTCTCCTAT Gene GeneID:788925|PRR5:NM_001101305:18_cdna Constitutive 0 NULL GeneID:788925 5 GENE PRR5 NULL proline rich 5 (renal) EMBV3_27355 GCAATTCAGGGTAATGCCAAGATGTGTGGATTCTGAGGTTTTGGCTTCTTGAGCTTCCTC Gene GeneID:538594|CREBZF:NM_001099088:32_cdna UTR3_Alt 2 NULL GeneID:538594 29 GENE CREBZF MGC155163 CREB/ATF bZIP transcription factor EMBV3_39267 GTCAGTCCCACTGCTAGGAGGGTTGGATCTCTGCTTCACCAGGAAAGGGAAATTGAGAAT Gene GeneID:510723|LOC510723:XR_084000:2_cdna Constitutive 0 NULL GeneID:510723 21 PSEUDO LOC510723 NULL similar to ATPase, Class V, type 10A EMBV3_15949 TCCACCAAGAGCCTCTTCCTCGGCCAGAAGGAAACACGCTAGAGAAGAAGGGTGGCAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24666 GCCTTTTGTTCGGGGTCTGTGTTTGTTTACCTGAGTTCTCTCTGGGGCCTGCATTGACAT Gene GeneID:538675|CALCOCO1:NM_001046435:42_cdna Constitutive 0 NULL GeneID:538675 5 GENE CALCOCO1 MGC128949 calcium binding and coiled-coil domain 1 EMBV3_39120 CAATGAATTTCACCTTTTTCTCAAGCGCACATGGAACCTTCTCCAGGATAGATCACATCC Gene BVT0102_215732 + 0 NULL GK000030.2:65029889-65067101 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00098838 TCONS_00010367 TCONS_00037938 TCONS_00019963 TCONS_00019989 TCONS_00022064 TCONS_00166080 TCONS_00244651 TCONS_00224115 TCONS_00250553 TCONS_00229820 TCONS_00135549 TCONS_00129726 TCONS_00136829 TCONS_00165811 TCONS_00231277 TCONS_00197449 TCONS_00249014 TCONS_00031938 TCONS_00064816 TCONS_00198626 TCONS_00020176 TCONS_00198800 TCONS_00221437 TCONS_00177994 TCONS_00251889 TCONS_00148277 TCONS_00210178 TCONS_00023334 TCONS_00017462 TCONS_00117178 TCONS_00244653 TCONS_00048822 TCONS_00152648 TCONS_00198662 TCONS_00055859 TCONS_00244654 TCONS_00250261 TCONS_00222772 TCONS_00141422 TCONS_00056147 TCONS_00207067 TCONS_00254568 TCONS_00249913 TCONS_00107792 TCONS_00197973 TCONS_00032586 47 XLOC_131641 XLOC_142855 XLOC_059082 XLOC_005918 XLOC_021767 XLOC_010641 XLOC_010667 XLOC_012735 XLOC_100918 XLOC_150512 XLOC_137411 XLOC_153496 XLOC_139314 XLOC_081772 XLOC_078439 XLOC_083040 XLOC_100651 XLOC_140766 XLOC_119110 XLOC_151957 XLOC_018183 XLOC_039540 XLOC_120280 XLOC_010854 XLOC_120453 XLOC_134752 XLOC_107767 XLOC_154830 XLOC_090159 XLOC_128688 XLOC_014001 XLOC_009039 XLOC_071344 XLOC_028953 XLOC_092413 XLOC_120316 XLOC_033667 XLOC_153204 XLOC_136079 XLOC_085850 XLOC_033950 XLOC_125586 XLOC_157500 XLOC_152856 XLOC_063702 XLOC_119632 XLOC_018826 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_13868 AGACAGGTCAGGCCCCTGGATTTTCTTACACAGATTCCAACAGAAGCAAAGGCATCTCTT Gene GeneID:100295890|LOC100295890:XM_002684955:218_cdna Constitutive 0 NULL GeneID:100295890 1 GENE LOC100295890 NULL similar to cytochrome c, somatic EMBV3_41335 TACCGCATGTCGCTGGTAAAGAGGAGGTTCGCCACAGGGAAGTACCTGGTGAGCTGTTAA Gene GeneID:505672|FCHO1:XM_002688540:148_cdna Constitutive 0 NULL GeneID:505672 7 GENE FCHO1 NULL FCH domain only 1 EMBV3_37439 GCAGATGTCTTAGAAACTTACCATGCAAAGGTAATTAAAAAAATGTCTCCAACTTCACTA Variant GeneID:535883|HIBCH:NM_001046413:39_cdna 674^814 4 EMBV3_11942 GeneID:535883 2 GENE HIBCH MGC137758 3-hydroxyisobutyryl-Coenzyme A hydrolase EMBV3_07501 CAGAGGGAGACACTCTTCTGGAGCTTAGATCAGCCTGTTGGCAATTAGAACCGCTTTTGG Gene BVT0102_068888 + 0 NULL GK000004.2:94432422-94467615 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184894 TCONS_00184895 TCONS_00184898 TCONS_00184897 TCONS_00184899 TCONS_00184893 TCONS_00184896 1 XLOC_111454 Coding TCONS_00184897 XLOC_111454 Coding Coding UBE2H 4:94463540-94565768 j TSS137577 4905 1 TCONS_00184897_1 183 8 0.952096804171109 0.00576651979638162 0.00580598433655561 0.00599052872208429 0.00369442852292716 0.0039152497886558 0.00180267626425793 0.00280150942180079 0.00240032804019157 0.00192936451980627 0.000592664672995619 0.000670815991847466 0.000141370120949632 0.000812033256763658 0.00132001147478808 0.00121864278063824 0.00555463327289314 2.00734735481655e-25 1.26225096484443e-14 0.00619308624621596 0.00874561376813673 0.00278929604343639 0.000266890190981179 0.00026619399052726 8.65960090695197e-28 0.0102337126144428 0.00916776274360026 0.00745397306183774 0.000496588066357449 0.000602823158149331 0.000145544657397228 XM_005205723.1 UBE2H PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2H (UBE2H), 0.0 4163 100.00 0.470336391437309 NM_003344.3 UBE2H Homo sapiens ubiquitin-conjugating enzyme E2H (UBE2H), transcript 0.0 2819 83.83 0.528440366972477 TCONS_00184897_1 sp|Q32LN1|UBE2H_BOVIN UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H; 3e-135 380 100.00 0.994535519125683 1 coding 1 0 1 1 -0.03457045530181 0.759403228244706 -0.0244298275191106 0.688738300909328 AGAGCGAGGCTGGGGTAGAGAGGCCGATTGAGCAGGAGTCGTCCGCTTGTCGTGGAGGCGGCTTGGGAGCCGGCGAGAGGGTGAGCGGGCGAGCAGGCGAGAGAGCTAGAGCAGGCAGGAGGGAGCGACGCGCGGCGCAGAGGAGCGCCAGGTCCGGGCCGCGGCGGAACCCACAGCCGGAGAGGGGCAGCCCGAGCCGTGCGCCGCGGGGTCCCCACCCCCACTCGGCCGGACAGTGCCCGGTGTTCCCCCCCGTGCGGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTGACGGGACCAAACAGGACCGCGGGGGTGTTGCCACCTCCATCGAGGAGCCGGCGCGGCCGCGGGCTCCTCAGAGCCGGGGCCCGGGGCCCGTGACAGGCGGGCTGAGGAAGGGCGAGAGGCGGCGGCGGCGCAGGCGACGGGGAGGCAGCGGCGACACCATGTCATCCCCTAGTCCGGGCAAGAGGCGGATGGACACGGACGTGGTCAAGCTTATTGAGAGTAAGCATGAGGTTACTATCCTAGGAGGACTCAATGAATTTGTAGTGAAGTTTTATGGACCACAAGGAACACCGTATGAAGGCGGAGTATGGAAAGTTAGAGTGGATCTTCCTGATAAATACCCTTTCAAATCTCCTTCTATAGGATTCATGAATAAAATTTTCCATCCCAACATTGATGAAGCGTCAGGAACTGTGTGTCTAGATGTAATTAATCAAACTTGGACAGCTCTCTATGATCTTACCAATATATTTGAGTCCTTCCTGCCCCAGTTGTTGGCCTATCCCAACCCCATAGATCCTCTCAATGGTGACGCTGCAGCTATGTACCTCCATCGACCAGAAGAATACAAGCAGAAAATTAAAGAGTACATCCAGAAATATGCAACGGAGGAGGCACTGAAAGAGCAGGAAGAGGGCACTGGAGACAGCTCATCGGAGAGTTCTATGTCTGACTTTTCGGAAGACGAGGCCCAGGATATGGAGTTGTAGTAGAAAAAGCACCTGCTTTTCAGAAAGACTATTATTTCCTAACCATGAGAAGCAGACTATAATATTCATATTTAAACAAAGCAATTTTTTTTATTACTAAACAAGGTTTTTATGAATAATAGCATTGATATATATATATTATATATCACCCTTTAGATCTTGATTTCTTGGTCATTTCTCAACCTGAGGTGCATAGCATATTCCCACATTCCATTTTGGTAGCAATATGCGGTCCGAATGCATGCATTGATAAGTCCATTTGGCCAAGTCAGCCTGTGTGCTACTGAACTGTCAAAAGGAATAGCCGCTCTGATAGATAGGCCTGAGTCAAAATAACAGGAAAAAGTTGCTTCTTTTATTGATGGTTCCAAAGAAACAAACCAAAACCAACCAGCTCTCGGACGTGAAGATAGAATAGTGCTTTTTCAAAACGGAAAGGAAAAAATTGGGGAGGAAAAGGCCTGCTGTGGGAGCATTTAGAGCCAGCCACGTTAGGATCAGAGCTGCTCCTTCCTGTGCATCCCAGGTGGCCCCACTTCTGTGGAGTAACAATATAAAACAGGGAGCTCATTGGAGTATTGAAACTTAAAACGATTTTTTTCGACTGGGATTTTAAGTACATTTTTATATGTAGATTTCTGCCCTTCTTGCTACCAGGCCCTGCAGCCACAAGTGTTTTGTGTTTTTTTGCTTTGGAGAACCTTTTGGAAATGGTTTTGCTGAATCTGATTATTTTTTCTTTGGGGTAGAACTTATATTCCAGACCATTTTTTGAGAGGACAAGACAGGAGGAGAAAAGTGACTGGGAAGAAGTTTCCTCTCCTGCGGCAGAGTCTGCCCTCATCGTGCTGTTGGCCACTGTGAGACCGCTGCCCTGGACTAAGAGCTTTAACTTTGAGGGTGCTCGTGGGGGGTTTTGTTTCAAGGTTTCGGGTTGTTGGTGGTGGTGTTTTTTTTTTTTTTTTTAAATTTTGGTGTGTGTGCGTGTGTGTGCATCGTGCTTAGGTTGCACATTTAATCTTCACCTTCCAAGAGATGGCCTCCCCCTTGGACAGCCGCTCAGCGGACTGTTAGACTCGGGAGAAGACCCTGCTGGCGGCTGTGCCTCCTGGGTCCTCTTGCTCACGCTTTGACTTTGTGTTCCCTTCTGCTGGCACTCTTGACAGTAGCCTGGTCATCATCTGCCTGTGGAAATGGGAAACGGGTATTGTAGACCCAGCACACATTCTAAATTTATAATGAGTAATAATTGGAACAAATAAAGGTTCTTGTACCCAAAGTGACTCTCCATGGGAAAAACAGCTTTTTTTTTTTTTTTCCCCTGAGTGAGACTGAATAGGAGGAAAGGATTCAGAAATACGACGTAGAACAGGTTTTTAGGGAAGAGAATTTTCTCTCCTGTGTATGTTAAAAGGAAATCAGACAGTTTCAATGCCTGCTAATCAAATGTTTACTCAGCTAACCATGTGTCCAGGTTGCTGGCAGAGTTTCTTTCAGATCCGAGTGTTGCCTGCTGAATTTGGAGAACTTCAGACAGTAGCTCTGTGGACTTTTGTTTTTTGCCACAACCAATAGGACAATAGCAGAATCATGCAGTTAAGTAGGGCTGTGGTTAGTTCACGTACTGAGTTCTCTCTCTAGCATTTGTGGCTTGTTGGAAGGGTAGTATTAACTATTTAACATGTAATGGTGTACTTTAACTCTTATCTAGCACGTTGTCTTCTCATTACTTCGGGGGAGGGAGGGTCTCTGCTGGCACTAACTTGCTTACCTGCTGAATTAGCAGTTTGCTTGTGCTATAACCGTAATCTGTAGGTGCGACTTAGGGTAGGCTTAAAGTGCTGGGTGGTGATTTGAGTTCAAACAATAAAAAATTGTATTTTTTCAATATTGTATAAACAATAGTGTTCTAATTACCTTTCGGAAAAAAAAATAATGTCCAGATAAAAATTGCTTTTAATCTTGTCAGAAAACAAAGAAACAAAACTAGCAGAAGCAAGTTTAGGGAAGGTTCGCGAGCAGTGCCACAGCTCTCCTCCCCAACTTAAATCCATGTTGATCTAACAAAAAGACACCAGCTCGCTGCACTCGAGAGCACCGGCACTAGGAGTCTGGTGGTGCAGAATTTCCCAGTTGGAGATTTGTTGGGGGCGGCTGCAGGGGTTCAGAAGCTGGTACGAGTATGGCTGCAGTGTGTGTGTGTGCACGTGTGCGTGCGCGCCCACCCAAGTCTGTGTGGTGACGGTGCCCTTAGGCTTCTCTGTGAGCACTGGAAGCTCCTGGAATAGCTGCCCGCGTCACGCTGAACCCCCCCGCCTTCTGTTCAAGCCTGTGCTTTCTGGGCACTAACCTGGGTCCCGTGCATGTGTTGGGCTCTGTGTGAAGCTTTTCCTCTCCACGGGGAAACTGCCTTTTGATAAGCTGAACAGACTCTCTTTTTACACTAACTTTTGTCCCTTCCCAGTGCCTGAGAGAGGTAGGAGAGGAAGCTGGAAGAGGGTCTGGCTGTGATTCTGAGGACTCTAGGTCCCCAATAACAGTTGGTCAAGTGAGTCTGGAGCAAGGGGTGGTATGACACCAAAAGCTTTTTTCCACGTTGTCCCATCGCAACACTCTTGAGAAGCATCCAGAGCCCCTCAGGAAGGCTGCACATTTTTAAAGGTGGTAGTGGTAGATCAGAGCTGCTTCCGGCAGGTTTCCCTCCCCTTCTTTAGTACCCCTCACTTTTGAAATCCTACCTGGTGGTTTATCAGCACAAAGCATTCTTTGCCCCTGTTCAAATGACCGAGCTCCATCTCTCACCAAACACAACAGATGAGATGGCCTCACCACGGCCCACTGCCCTCCAGCCTCCCCAGCACCGGGGCCTCACGGGCTGCATTTTATGGTAGCCAACCTAGACACTGGCATTTATGCGTTTTCGTCAATTGTATCGCCCTCCTTGAGGTTACTGTGCAGGTTACCAGCGTTTGATATTAGTGAGATAATTATCAGAAGTTGCCATATATCTCTCCAGTACCTAACATTTTTCTTCCACTCCAAAAGCGGTTCTAATTGCCAACAGGCTGATCTAAGCTCCAGAAGAGTGTCTCCCTCTGAAGCAATCTTTCTTTCCCCCTCACAAGGCTCCCAGAAGCCCTAGTTGGCCTTGACCTGACACTTCCTTTTTATTAGGCGTCCTGTTGGGGTGGCTGAGAATCATGAAAAACAGATCCTCTGCTAGCCTCCATGATGAAGTTGTTAGACACCAGCTTTCTGGGAACTCGTGTTTGATTTTTAAATGGCATGTGACCCTTCTGTGTTCTGGGGACTCAATCAGAAAGGTAAAAGCCATTAACAAAAGTTAGTAAGAGTTTTATTCATCTCATATCTTCCTGCCTGGGTTCACGGCCTTACTGACTGAAATAAAATCATTTCTGATTGGACGCAGACCTGCGTTTCTTTGGACTTCTGAATCCATGTTCATATTTTCTCTGGCCACTGAACACCTTGGAGATTCCGTTAGGGACTGGATGGAGTGGAGGCCCATTGGGGAAGGGGTGCAGGTTCTCCACTCACCTGAGGAAAGGCCAGGACTCTCTTAAGTCAGCAAATAATTGTCTTGGCTGTGGGCTTGGGAAGAAATGGCCGTTATTTACTGATTGTATTTGGTACATATTGTGTGATACTTGAAGAGATAAAAGGGATTTACCAGCCCTTAATTGAAATCTAAGCTTTTTATCACTTATTTTTTCCTTGCCCCCTGTCCTCCCTCCCACCTTTCTCCTTGCATTGTGATGATCTAGTGGGCACGTCTGTCAACAGGACAAATGCCTCTTCTGACTATAACCTCTTAATAGTTGTGTATAATGAAAAACTGTAAACTTTTTTTAAATAAAATGTGTATATACCTTGGCAAATG EMBV3_14385 CAGCTTTGGCTGCTCTCATAGCTTCCTTCCATGTGTTTGGGATTGAGTGTCCAAGAAGAC Gene GeneID:511666|SAMD3:NM_001038083:12_cdna Constitutive 0 NULL GeneID:511666 9 GENE SAMD3 MGC134207 sterile alpha motif domain containing 3 EMBV3_09119 TCCACCACTCCCAGATATATTCTTAGACAGGTCCATACTTCTGCGAAGGCTTTGTAGTCT Variant GeneID:540644|SAMD8:XM_002698916:121_cdna 768^863 2 EMBV3_32987 GeneID:540644 28 GENE SAMD8 NULL sterile alpha motif domain containing 8 EMBV3_29096 AGGAATGCTCCAGAAATGTTATCATGGCAAAACTGGGAGAGTCTACATTACCCAGCATGC Gene GeneID:785151|LOC785151:XM_002685645:365_cdna Constitutive 0 NULL GeneID:785151 2 GENE LOC785151 NULL similar to 60S ribosomal protein L21 EMBV3_34963 GGCTGCCCATCTGTGGACGTGGCCCCATGAAGGTTAGACAGAAACAAATGAAAACAGAGT Gene GeneID:539265|ZNF502:NM_001103101:184_cdna Constitutive 1 NULL GeneID:539265 22 GENE ZNF502 MGC166296 zinc finger protein 502 EMBV3_34045 CTGTTATACAAGGTATTCACACAGACCACAATACGCTGAAATTGGTCCCTAGGAAAGACC Gene GeneID:618451|LYRM7:NM_001076505:72_cdna Constitutive 1 NULL GeneID:618451 7 GENE LYRM7 MGC137049 Lyrm7 homolog (mouse) EMBV3_32040 ATGCCTCTTGGGTGCCAAGTACTAATCATGGAGATGCTGGTGTCCCATTTGCCTCGGATA Gene GeneID:100337121|LOC100337121:XM_002689257:166_cdna Constitutive 0 NULL GeneID:100337121 7 GENE LOC100337121 NULL protocadherin gamma subfamily B, 2-like EMBV3_40789 CACTTACGCTCTCATACATTGAGTACTTTTATTCCAAAACTAGTGGGTTTTCTCTACTGG Gene GeneID:540488|SMAD1:NM_001076223:19_cdna Constitutive 0 NULL GeneID:540488 17 GENE SMAD1 MGC138917 SMAD family member 1 EMBV3_34780 ACTACCCCCTCACCGTCTCAGGAAAGATCCAGAAATTCAAACTTCGAGAGCAGATGGAGC Gene GeneID:768237|ACSF2:NM_001078112:180_cdna Constitutive 0 NULL GeneID:768237 19 GENE ACSF2 MGC139897 acyl-CoA synthetase family member 2 EMBV3_24390 CATACATTATCTGAGAAAAGAAACTACCAGATGCTGGCATCACCATCTACATCAGGTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10427 GCAAGACATGCGAAAAGAAGCACAATTAACACTGAAGACGTGAAGCTCTTAGCCAGGAGG Gene GeneID:613732|APITD1:NM_001038576:94_cdna Constitutive 2 NULL GeneID:613732 16 GENE APITD1 MGC134435 apoptosis-inducing, TAF9-like domain 1 EMBV3_02451 TGAGGTTGCTGCTGCCCCAGTTCGTTGAGCCCTTCTGGATGACCATGTACAGCTTGTTTT Gene GeneID:618614|LOC618614:XM_002687972:101_cdna Constitutive 0 NULL GeneID:618614 5 GENE LOC618614 NULL similar to BIK1 EMBV3_06767 TTGGGAGACAGAGAATGCTAGACACCTGTAGCCTGTAGCACAGAAGCCATTTGGATTGGC Gene BVV0102_208931 - 1 EMBV3_29488 GK000002.2:92126363-92325179 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31313 CCTCCCAATCAACTGGTGACAACCCTATATGGAGAGAACCTCATCATTCATGCCACTGCC Gene GeneID:100124525|CX3CR1:NM_001102558:2_cdna UTR3_Alt 1 NULL GeneID:100124525 22 GENE CX3CR1 MGC140194 chemokine (C-X3-C motif) receptor 1 EMBV3_04251 CATGCACACATCGTGGAACTACTTGTTAGGGAAGCAATGCAGAATCAGGTGAATGCTAAT Variant GeneID:540818|GABPB1:NM_001076242:145_cdna 374^568 1 EMBV3_09084 GeneID:540818 3 GENE GABPB1 GABP2 GABPB2 GA binding protein transcription factor, beta subunit 1 EMBV3_42243 GGTGCTCCACCATCAGTTTGTTATCCCGGCTCTGAATGAACCTGCCACTCGTCTGTGTTT Gene GeneID:282104|TUFT1:NM_174479:22_cdna Constitutive 1 NULL GeneID:282104 3 GENE TUFT1 NULL tuftelin 1 EMBV3_29492 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43649 CCGCCGGGGATTCCAGATGCTGTTGATGGAGTGACTTTAACCCCAAGTCCAGCAAGCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33525 CATCCAAGTCTGATTAGAACTGCCCATCGGTTTTTCTTGTAAATTTTTAGAAGACCTCAC Gene GeneID:540726|TMEM57:NM_001038647:257_cdna Constitutive 2 NULL GeneID:540726 2 GENE TMEM57 NULL transmembrane protein 57 EMBV3_31959 ATCCCTTAAGCAAGCAGGGAAAATCACTGAAAGTCAAGAACCACCCTCCTGGGGTCTAGC Gene BVT0102_250389 + 0 NULL GK000027.2:18609708-18632851 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13223 CAAAGTTGTCTTGATGCCGAAACCTACCTGGTGTTGCCCTAACTTGTCAGTGCCCTTTGC Gene GeneID:613381|HN1:NM_001034734:23_cdna UTR3_Alt 2 NULL GeneID:613381 19 GENE HN1 MGC127173 hematological and neurological expressed 1 EMBV3_06814 CATCCTTCCCTGTCCCTGCTCCCCAACAAAGCAGTAAAGACGCCTGCATCTGTGTGCTGT Gene BVV0102_135203 + 0 NULL GK000017.2:65740833-65863711 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26810 GCTGATCTCCGCAGGGCCATTCAGCTCAGTATGCAAGGTACTTCCAGAAATAGATGTCAA Gene GeneID:790880|ATXN3:NM_001099216:351_cdna Constitutive 0 NULL GeneID:790880 21 GENE ATXN3 MGC165708 ataxin 3 EMBV3_25557 GCCGCGACCAAGTCATGGCTGAGACCTACGAGCTAATGTTCCTGGAAACAAGCGCTCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13426 TCTCTTGCACAAATACGTCACAAAAGGGGGAATCTCAGCGACGACCAGGCAAAGGTTCAC Gene BVT0102_115275 + 1 EMBV3_38376 GK000018.2:62541238-62547218 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084706 TCONS_00084707 1 XLOC_051674 Coding TCONS_00084707 XLOC_051674 Coding Coding UBE2S 18:62537795-62543809 j TSS63421 3462 1 TCONS_00084707_2 162 0.223859041016753 4 0.424912689173457 5.84963109727097e-05 7.92467871696446e-06 0.000151646375002656 5.38988157111222e-06 5.84070730196419e-05 1.39249012037853e-06 7.71147208549633e-05 3.53269393136724e-05 0.000105853105061552 5.8561173885684e-05 2.72606552264021e-06 9.97848631800714e-05 4.77195636112458e-05 0.000267316902651184 0.000270202658259185 0.000136723005677859 0.000355761289604775 7.74852369981056e-05 2.54590187768511e-05 0.000172970505803377 5.55109060437599e-10 7.23445227121082e-05 0.00020827965851778 0.000184756373735414 5.26743679837398e-05 6.58916661076599e-07 2.88731576712787e-12 7.71592165082769e-06 1.90109858302685e-06 4.7723351221558e-05 XM_005219708.1 UBE2S PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2S (UBE2S), 0.0 1465 100.00 0.234257654534951 NM_014501.2 UBE2S Homo sapiens ubiquitin-conjugating enzyme E2S (UBE2S), mRNA. 0.0 1021 87.32 0.232235701906412 TCONS_00084707_2 sp|Q1RML1|UBE2S_BOVIN UBE2S_BOVIN Ubiquitin-conjugating enzyme E2 S; 7e-113 324 100.00 0.993827160493827 1 coding 1 1 1 1 -0.0138735351016668 0.979580886418041 -0.0022217753375747 0.967507886095274 CCGGCCTTTTGGGCAGGCCTGTGGGTCTTCCGGGAACAACAACACTCTGCGGCCGTCTCCAGGACCGATCTGGGGTTTCCAGGAACTCCAACGTGGAGAACCTGCCCCCCCACATCATCCGCCTGGTGTACAAGGAGGTGACGACGCTGACCGCTGACCCACCTGATGGCATCAAGGTCTTTCCCAACGAGGAAGACCTTACCGACCTGCAGGTCACCATTGAGGGCCCTGAGGGGACCCCGTATGCCGGAGGCCTCTTCCGCATGAAACTCCTGCTGGGGAAGGACTTTCCGGCCTCCCCACCCAAGGGCTACTTCCTGACGAAGATCTTCCACCCGAATGTGGGCGCCAATGGCGAGATCTGCGTCAATGTGCTCAAGAGGGACTGGACCGCTGAGCTGGGCATCCGGCACGTGCTTCTGACCATCAAGTGCCTGCTGATCCACCCCAACCCCGAGTCGGCCCTCAACGAGGAGGCGGGCCGCCTGCTGCTGGAGAACTACGAGGAGTACGCAGCCCGCGCGCGCCTGCTCACTGAGATCCACGGCGGCGCCGGCGGGCCCAGCGGTGGGAGGCCCGAGCCCGGCCGGGCCACTGCCAGTGGGGCGGCGGCCTCCACTGCTGACCCCACAGCCCCTGGGGGCCCAGCAGGGGCTGAGGGGCCCATGGCCAAGAAGCACGCGGGCGAGCGCGACAAGAAGCTGGCAGCCAAGAAAAAGACGGACAAGAAGCGGGCACTGCGGCGCCTGTAGTGGGCTCTCTCCCCTCCCTTCTTACCTGACCCGACTCTGTCTCTAAGTTATTTAAATTATGGCTGGGGTGGGGGAGGGCACGAGGGCACTGGGACCTGGATTTGTTTTTCTAAATAAAGTTGGAAAAGCAGCTCTGCACCTCCACCGCCTGGGCTGTGAGCAGCGGCACCCTGGCCCGTCTTGGGTGCAGTGGTCGGTGGGGCCTGGTCCCGATCACTCCTGACCTCGTCTTGAAACAGGCACAGCGGACTGGTGGGGTCTGGCCAGGCGGCAGGTGCGGGCCCCATGTGTCTGCCCTGCCCTGGGTTCTTGGTCCAGCTCTGGCTGCAGAGTGTGCTCCCGGGGGCCTCTGACTCTCTTGCCAGGCCTCATGACACTGGTCTCGTGGTGGGCGGGTCGCTGCTCAGGTCTCAAGTGAAGCTGACTAGGCCCGCTCCTTTCTCCAGGGTTGTGGGCCTGGGGCTGTCCTCAGCTGCAATCTGCCAGGGTCCTCACCCCACGCTCCCCTTTTGTGGCTGACCTGGCCCTTTGGCAGGGCCTAGTTGATTAGATGCAGCTGTTTGATAAGCCCTGGGGGAGAACTTGACTGCAGGAGCTTGTCCGGGTGGGAAGGGGGGTGGGTCTGGGGCATGGCCCTCTTCCCCGCCCAGTTTCCTCATCTGCAGGAGGGCAGAGTGGCAGTCACTGCACCCGTGGGTGGCTGTGGAGGACCAGGGCGAGGCCGCAAAGCCTGGAGAAGTGTGAAGGGACAGCAGGGAGCTGACTTGAGTACACAAAACGCTGAGTAAAGCCACATACAAGTACAAAATATTTGGTTCCACTTCCGTGAAATTCTAGACGGCAGCCAAAAGCAGATCCCTGGCTGGCTGGGATCAGGGAGGATCAAGGACACGGAACCTTGGTGATGAGCACGTTCCAGATCGGTTACGGTGGGGCTCACGTGGCTGCATAATTATGTGAACATGTGTATATTTAAATTTGGTGTATTGTACTCTGTAAAGTACATCTCAGAATTTCATGTAATTTAAAACAAGGAATTCTGTTCAGTGGGAAAGATGATAGTTAACAAGACATACAACGGAAAGGACAAATCTAAATTTGTGAAGAGCCCCTACAGGTCAGTAAAAATGTGAAAGCAAAATCTCTTGCACAAATACGTCACAAAAGGGGGAATCTCAGCGACGACCAGGCAAAGGTTCACACCATCACAAGTGATGGGAACCCCGAGCTGACCCCGCTAGACCTGGCAGTGCCAAGTGCAGAGCCAGGGATGCTCTGCCAGTCCACGGTGCAGGAGCGGGAAACAAGTCACGTGGAGACACGGGGAAAGGCCGGAAGCACGAGTATGTCATTACTCAGCACTCTTGCACACACACCACGAGCTGCAAAGCCACGTTTGTCCCAGGTTGCAAGCAGTATAAACACCTGGATACAGTTGAGGAGCAACAAGAGCAGTGGGCCGTCACTCAGCAGCGTGGAAAAGCTTGCCATCAGCCAAACAAGCAAGGTTCAGTAGATCCACAGTCCTAACGCCATCGCATGCAGTTCCAGAACCATCAAAACCAAGCTCTGCTGCTAAACACACATACCACGGTGGTCACGCTGTGTTTGAGAGCAAGAAAATTGTTTCCCTAAGGCTCAGGATACTGGTTACCCCTAAGCAGCAAGGAGCCCAGGAGCAAAACATAAATGTGTCAATGTGTGCTTTTCTGTGCATCTGCTGTATTTCAGGATTTTAAGGACATGGAGGGAGGGAGGTGGAAGCAGGGTTCTGGATGGGGAACACGTGCGCCCATGGCTGATTCATGTCGATGTATGGCAAAAACCACTACATATTGTAACTAGCCTCCAATTTAATTTTTAAAAAGACAAACACACCAAAAGACATGAAGGAGCACATTATGAGAGATGGACCAATCTCCAAAACATATTACGTAAGAAAGAGCAACATGCCAACACTGTATAAAATATGCTACCGTTTCTCTTTTCAAATTTAACCAGAAGGTGACATTAGCCTGCAAACACTGTCCCAAGAAAGAAGAGCCTGGAATACCATGTGCATGGTACCCATTCAAAATGCAACGTCTTGACTTTTAAAAAATTTTAAAGATAATGAAGTTTCACTAGAATGGCTCCCTCAAACTCCCATCTCCCCAACACCCAACTCCCTAATCAGGGACAACCAGTGTCAATGGGTTCTCTTGTATTTTTCTGAGGAAATTCTATGGGAATGCAAGCAAATTTAAGCATGTTGTTTAGTCACTAATTCATGTCCAACTCTGTGACGCCATGGACTGTAGCCCACCAGACTCTTCTGTCCATGGGATTTTCCAGGCAAGAATACCGGAGTGGGTTGCCATTTCTCCAGGGATCTTCCTAACCCAGGAATCGAAACCGCATTTCCTGCATTTGTAGGTGGGTTCTTTACTACTGGGCCACCAGGAAAGCCCCCCAAATTTAAGCATATGTTTTTTATTATTTATAATTTTGGCCATACCACACGGCTTGTGGGATCTTAGTTCCTCGGCCAGAGAGTGAACCCGCGCCCTTGGCAGTGAAAGCGCAGAGTCCTAATCGCTGGACCAGCAGGTCAAGTCCCCTAACACCTGTGCTCGCACGTCCACTGTCTCGTTTGTGTATACCTGCCAGTGACCTGCACACAGCATGTCACACCTGGGCTTTTTGACTTAGCATGTCTGGCTGGCTGTCC EMBV3_09448 ATGGCGGTGGCAAATTCAAGCCCTGTCAATCCCGTGGTATTCTTTGATGTCAGCATTGGC Gene GeneID:789870|LOC789870:XM_002694880:886_cdna Constitutive 0 NULL GeneID:789870 18 GENE LOC789870 NULL similar to Peptidyl-prolyl cis-trans isomerase H (PPIase H) (Rotamase H) (U-snRNP-associated cyclophilin SnuCyp-20) (USA-CYP) (Small nuclear ribonucleoprotein particle-specific cyclophilin H) (CypH) EMBV3_36190 AAGACTTCTTGGGATTCTGGACGGTCAACATCCGCCTGAGACTGTGTGCCAGTTGTACAC Gene BVV0102_067847 + 0 NULL GK000024.2:42850354-43092735 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009933 TCONS_00136897 2 XLOC_005485 XLOC_083108 NonCoding TCONS_00136897 XLOC_083108 NonCoding NonCoding - 23:27611530-27612413 - TSS102187 883 2 TCONS_00136897_2 52 0.997734994337486 1 0 0.000946741417480865 3.39500268558763e-05 1.39735744728966e-05 9.40447822381952e-06 2.79567881978737e-06 8.50713778926064e-06 0 6.08948234112668e-07 5.36135364998934e-06 5.82459620438355e-07 0 0 9.74842349822957e-07 5.0461233868395e-06 3.28325629345347e-06 1.99408160334661e-06 0 0 2.05733920830546e-05 0.000123923151642141 7.76147954192579e-06 0 0 0 1.49797298860672e-06 4.42109913810965e-05 6.85669070902355e-06 0 0 0 XM_005213910.1 LOC101905101 PREDICTED: Bos taurus multidrug resistance-associated protein 4-like (LOC101905101), mRNA. 3e-25 120 89.89 0.0996602491506229 0 noncoding AAAAAATATATCTAGGACTTTGTCTGATGTTGTTGTAGGAGTTCATTTTCAGCTAGTTCCTTGGTCCGGCATATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCGGTACTAACGACAGGGTTTTAATCTATTGCACCTGTCGCTTCCTAGGTGGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGATTTCTGCCCTGACACAAAGGGGGCGGGGGTGGACACTTTTTTGGGGGGGGGCTCACTTGTTCAGTCGCGCTGTGGGGAGGGAGGGACGCTGCAATCAAATAACACTGGCGTGTGCTCGCAGTGCCTCAACCACACTGGGTCTGCCCCCGCTCACGCCGGTGTAGCTTCCCTGCCCACACTGCTCAGGCTCTAGGTTGCTCCCCGGAAACCATCCGAGGCCGGCCCTGGGCTGCATGCACCTCCCAGGTCTAAGCCTCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGCACTTCCCGGGTCTGAGCAGCTCAGGTGATGAGGTGTTTGGCGACTGTGGTCGCTGCGACTTATCGCCTCCCCGCCCCTCGCTTTTCTGGGTGTACAACCGGCGCACCTTCTCAGGCGGATGTTGACCGTCCAGAACCCCAAGAAGTCTTAGTTTGCAAAGACGCCTGCTTACAGTTTTGTAGATAACATCTCTCTGGGGCTGCGATTGCCTCCTTCCGGCTCTGGATGCCTGTCAACCAGAGGGGGATGGTCTGCAGCTGGCTATCTCTGTTCAGCCTTTGTTCTGTGCGTGGGCGTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGAGTGGTATCTGTCCTGCAGTCTGGTTTG TCONS_00132923 TCONS_00132924 TCONS_00132925 . 3' 7473 TCONS_00132923 TCONS_00132924 TCONS_00132925 . 3' 8355 EMBV3_02900 ACACCGAAGCCAAAAGATATTCGGCAGAGTCTCAGTCCAGCGTCTCGGAGGCCTATTCTG Gene GeneID:525628|DIAPH3:XM_002691734:32_cdna UTR3_Alt 2 NULL GeneID:525628 12 GENE DIAPH3 NULL diaphanous homolog 3 (Drosophila) EMBV3_19791 AGTATCCTCCAGTCAGTCGGAAGTACGAGTGGAACTGAAGTCAAAGCAATAACGTACTCA Variant GeneID:613795|ZBTB8OS:NM_001076288:172_cdna 533^956 3 EMBV3_31262 GeneID:613795 2 GENE ZBTB8OS NULL zinc finger and BTB domain containing 8 opposite strand EMBV3_18946 GTTGGGAAAGAAGGCTGTGCTCTTTGAAGAGTACTGGCGGAGGACGCTGGGCATGCAGGT Variant GeneID:505283|ABHD6:NM_001075196:82_cdna 141^293 1 EMBV3_37771 GeneID:505283 22 GENE ABHD6 MGC139241 abhydrolase domain containing 6 EMBV3_07908 TCTGTGTGAGCAGTAGTGGCTGCTGTGACGAAACTTAGGGTGCTGAGACAAGCAATTAGC Gene GeneID:541099|MTPN:NM_203362:32_cdna UTR3_Alt 2 NULL GeneID:541099 4 GENE MTPN MGC127565 myotrophin EMBV3_08577 ACAATTGCCTGGCCCTCTCGCCCCCATATTCATCCCGTGTCATCATCTCCGGTCCTTAAA Gene GeneID:538650|NLN:NM_001033989:17_cdna Constitutive 0 NULL GeneID:538650 20 GENE NLN EP24.16 neurolysin (metallopeptidase M3 family) EMBV3_17566 TTCCTCAAGAGCCGAAACTCAAGAGAAGGAGGATTAAGGAAGCCCCAGACACTCCAGAGA Gene GeneID:530096|C19H17orf64:NM_001075929:268_cdna Constitutive 0 NULL GeneID:530096 19 GENE C19H17orf64 C17orf64 MGC133491 chromosome 17 open reading frame 64 ortholog EMBV3_40422 CTAAGTGGGGGAGGCCAAATGGCAAGATGTGAAGGAAAATTCCAGAGGCAGTCTTCCATG Gene GeneID:523900|CDKL1:NM_001101116:73_cdna Constitutive 0 NULL GeneID:523900 10 GENE CDKL1 NULL cyclin-dependent kinase-like 1 (CDC2-related kinase) EMBV3_05632 CCATCTCAGCTTCTTTGCCTCCAAGCCCAGCCCCACAGCCATGATCCTCAACCTGTGGGA Gene GeneID:506037|UNC5A:XM_002689012:62_cdna Constitutive 0 NULL GeneID:506037 7 GENE UNC5A NULL unc-5 homolog A (C. elegans) EMBV3_34627 CGGATTGCATACTCTTTTCATTCACACCTGTACATTATAGGCAGCAATGTTATTAGAAGC Gene GeneID:540975|TIPARP:XM_002684964:241_cdna Constitutive 2 NULL GeneID:540975 1 GENE TIPARP NULL TCDD-inducible poly(ADP-ribose) polymerase EMBV3_13614 AAAGATGAGAGAGAAAACGCCATCTTACGGCAAGCCCCGGCCTCTGTCAATGCCTGCGGA Gene GeneID:506781|CNKSR3:XM_002690349:5_cdna UTR3_Alt 2 NULL GeneID:506781 9 GENE CNKSR3 NULL CNKSR family member 3 EMBV3_11418 AGAAGAGAGATCAGTTGAAGATATGAAAGTAGCTGTGGTACCTGCTCTCCCCCAACCCCC Gene GeneID:511210|TSR2:NM_001035097:17_cdna Constitutive 1 NULL GeneID:511210 X GENE TSR2 MGC127825 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) EMBV3_16071 TTCGATCCCGGTCTGGGAAGATCCCACATACCCCAGAGCAACTAAGCCCTCAACTACTAA Gene BVV0102_097984 + 0 NULL GK000004.2:99254543-99475014 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189751 1 XLOC_115789 NonCoding TCONS_00189751 XLOC_115789 NonCoding NonCoding - 4:99346780-99347081 - TSS142119 301 1 TCONS_00189751_1 38 0.98671096345515 1 0 0 0 0 0.000855245048442387 0 0 0 0 0 6.83470508258222e-05 2.28157902472469e-05 0.000439536773264806 0 0 0 0 0 0 0 2.38918190022306e-05 0 0 0 0 0.000959858618576621 0.00030428985990482 0.000253053348157462 0 6.45127957855089e-05 0.00291624383876852 XR_226286.1 LOC101907813 PREDICTED: Bos taurus uncharacterized LOC101907813 (LOC101907813), 9e-46 187 74.43 0.980066445182724 0 noncoding 0 0 0 0 -0.460590219938886 0.0427315829078301 0.0151810848524433 0.86376381806335 GAATTTATTTTTGGCTCTGATGGGTCTTTGTTGCTGCATGGGGTCTGCTCTAGCTGCAGTGAGCAGGGGCTGCTCTTCTGTTGTGGTGTGCAGGCTTCTCACTGTGGTGGCTTCTCTTGTGGAGCACAGGCTCTAGGTGCGTGGGCTTCAGTACTTGCGGTTTGCAGGTTCTAGAGCTCGGGCTTAGTAGTTGAGGGCTTAGTTGCTCTGGGGTATGTGGGATCTTCCCAGACCGGGATCGAACCTGAGTCCCCAGCATTGCAAGGTGGACTCTCAACCACTCGACCACCAGGGAAGCCCG TCONS_00182507 . 5' 30430 TCONS_00182507 . 5' 30430 EMBV3_05182 CCCCTCCACAGATCCGTTTCTGCTCTCCTACATGGCAAAGGAATTGAGTATAATTTCTGC Gene BVV0102_220279 + 1 EMBV3_23846 GK000007.2:26329744-26697266 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28894 CTGTCCTTCAGACAGCCTTATGCAGGTTTCATCTTAAACGGTGTCAAGACCCTGGAGACG Gene GeneID:617648|LOC617648:XM_002699678:68_cdna Constitutive 0 NULL GeneID:617648 X GENE LOC617648 NULL similar to chromosome X open reading frame 40 EMBV3_42982 CGAGCGGCTCCTCCGGGCTCAGGTCCTGAGTGTCTATAGAAGCTGAGGTCCATCAATCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01082 CCAGTCTGGGATCCTGCCATTTCTCCAAGGGGCTTTGGTTCCATTTATTGGAGAGTGGTA Gene BVV0102_125964 - 1 EMBV3_00905 GK000010.2:44114906-44342322 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35702 ATAGAGATGCAATCATAGAGAATGGACTTGTGAACACAGGGTGGGAAGGGGAAGGGTGGG Gene BVT0102_027381 + 0 NULL GK000019.2:47850225-48089630 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06804 TCTTCCTTTTTGGAGAAGAGCCGTCAAAACTGGATCGGGATGTTCTGGCAGCCCTGGAGT Gene GeneID:540159|ANKLE2:XM_002694448:39_cdna UTR3_Alt 2 NULL GeneID:540159 17 GENE ANKLE2 NULL ankyrin repeat and LEM domain containing 2 EMBV3_20865 GTCAATCAAAAACCAGGGTCCTGCTGACTCCTGCCGCCTTTCAAGTCTTTCTGCTCCACT Gene GeneID:327671|RAC2:NM_175792:167_cdna Constitutive 0 NULL GeneID:327671 5 GENE RAC2 NULL ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) EMBV3_10972 AAATCCTTCAAAGCGTGATAAAAATAGCCGTGCCCTCCCTTACCCCTGTTCCCAATGGGG Gene BVT0101_055378 + 0 NULL GK000002.2:131432712-131462791 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112755 1 XLOC_068650 NonCoding TCONS_00112755 XLOC_068650 NonCoding NonCoding - 2:131435541-131436608 - TSS84376 1067 2 TCONS_00112755_2 83 0.19493908153702 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00210401340007378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XR_239764.1 LOC100848447 PREDICTED: Bos taurus uncharacterized LOC100848447 (LOC100848447), 2e-67 260 86.43 0.203373945641987 0 noncoding 0 0 0 0 0.244154661475441 0.102182026976732 -0.0508588512784608 0.39937003313421 GGGTTGGGTGGTAGAGACAGAGATGGAGAGATTTGGGTGGGATCAGGAGGTATTTTTGAGACAGAGCGATATCTGAGACCATTTCAGTGAAGTGTGAAGCACAGAAAATGAAAGCATTAGTTGCTCGGTCGTGTCTGACTCTTTGTGTCTGACCCCATGGACTGTAGCCCGCTAGGCTCCTCCATCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGATAGCCATTGCCTTCTCCAGGGGATCTTCCTGACCCAGGGATTGAGCCTGGGTCTCCTGCACTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCTGTGAAGCACTGAGTCTGGCACTAAATCTGTGAACTCAGTTCACATTATTCTAATTGTAGAAAAGACTTGGCACATCCTTGTTGGCTGCTGGAAACAGCCTCCCAGCCCAGGGCCGACATTTTGCAGGGTCTCAATGCACGTTTGCAGAATAAGGCAAAGGAGCTCTGCAGACTTGACTGAGCAACACTCGCCTGTCCTCCACACCCAGCACTCTAAGGATGGCCAGATTCCTTCCTGCTGGTGTCATAGATCATAGAGCCATTCTTTGGGGGCTGCTACATTTCGGAAGCGTGGGAGGAGGGCAACGCTTGGCTGCTTTAAACGGATCCCTTGTGATGGAATGCCAGGCATCAGCAGGCAGGGTTTCTTTCAAGGGTGCAGCCCCTCCGAGCACCCCCTACAGTGACGTCTGCGACGCCAACAGACTGAGCCTGCAGCAAGTGTGTGGACAACAACAGAAGCAGCTGTGAAAATCCTTCAAAGCGTGATAAAAATAGCCGTGCCCTCCCTTACCCCTGTTCCCAATGGGCCTGGACGTGTTTGTTTGCTCAGCTTTGAAGCTCAGAGCCATTTCCCAGACCCTGAGCAGAGGAAGAAAGGGGGAGAAACTGAAGACGTGGCTGGGGAGGAAGAGAGGCAGGTCAGAGCTTCCCGGATCCCACTGTAGAGCGTCTGAAACAGACACAACATCAAAGATGATCTAATCCATCTCTTTTGACAGATGGGAAATGAAGACCCAGGGAAC TCONS_00104039 . 5' 93 TCONS_00104039 . 5' 93 EMBV3_41942 TCTCCAGAAGAGGAGAAGAGGAAATGCAAAAAGAAGTGCCTGGTGCAGAGCCCCAATTCC Gene GeneID:100296277|LOC100296277:XM_002700074:147_cdna Constitutive 0 NULL GeneID:100296277 X GENE LOC100296277 NULL similar to ribosomal protein S27 EMBV3_16319 AGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGAT Gene GeneID:100337406|LOC100337406:XM_002698264:936_cdna Constitutive 0 NULL GeneID:100337406 25 GENE LOC100337406 NULL hypothetical protein LOC100337406 EMBV3_02224 CTGGCAGCATTTCTCCATTTCCAGGGGTGGTTCGCCTGTGATGATGGGGTGCAACATTCT Gene BVT0102_119869 + 1 EMBV3_41352 GK000007.2:45495384-45497738 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213193 1 XLOC_130401 Coding TCONS_00213193 XLOC_130401 Coding Coding APC2 7:45478114-45497505 = TSS159786 8884 1 TCONS_00213193_8 2253 14 0.542547705002579 0.000182246571338108 9.16166975453887e-05 6.56238454870269e-05 0.000197227926509406 6.55771581563848e-05 3.22112297591742e-06 3.74164465566096e-05 0 1.15456660589954e-05 0.000290385450432134 3.60745005045755e-05 1.06256083187577e-05 1.03351008757895e-05 0.000112403200287213 2.25554562822755e-05 3.27023409826848e-05 5.60634163966274e-06 5.64855684729786e-06 4.43945393498359e-05 0.000160277417693016 1.12763272869298e-05 0 0 5.84989036105129e-05 4.445336354647e-05 0.000112055412589006 8.57372265976012e-06 1.08117709575383e-05 7.65021238919399e-06 1.75954416913393e-05 XM_005199027.1 APC2 PREDICTED: Bos taurus adenomatosis polyposis coli 2 (APC2), 0.0 1.601e+04 99.97 0.99988743809095 NM_005883.2 APC2 Homo sapiens adenomatosis polyposis coli 2 (APC2), mRNA. 0.0 6677 81.14 0.767559657811796 TCONS_00213193_8 sp|O95996|APC2_HUMAN APC2_HUMAN Adenomatous polyposis coli protein 2; 0.0 3322 81.93 0.999556147359077 5 coding 0 0 0 0 -0.239540054548517 0.347729634041844 -0.0227013565179567 0.640358245948559 ATGACGAGCTCAGTGGCAGCCTATGAGCAGCTGGTGCGGCAGGTGGAGGCCTTGAAGGCCGAGAACAGTCACCTGCGGCAGGAGCTTCGGGATAATTCAAGCCACCTGTCCAAGCTGGAGACAGAGACGTCGGGAATGAAGGCGGTCCTGCAGCACTTACAGGGCAAGCTAGAGCAGGAGGCCCGTGTGTTGGTGTCCTCCGGGCAGACTGAGGTGCTGGAACAGCTGAAAGCCCTGCAGATGGACATCACCAGCCTGTATAACCTCAAGTTCCAGCCCCCAGCTCTGGCCCCTGAACCCACTACCAGGACCCCTGAGGGAAGCCCGGTGCACAGCTCTGGGCCCTCCAAGGAGAATTTTGGGGAGCTGAGCCGGGCCACCATTCGGCTCCTAGAGGAACTGGACCGGGAACGGTGTTTCCTGTTGAATGAGATTGAGAAGGAGGAAAAGGAGAAGCTCTGGTATTACTCGCAGTTGCAGGGGCTATCTAAGCGCTTGGATGAACTCCCGCACGTGGAGACGCAGTTCTCAATGCAGATGGATCTGATCCGGCAGCAGCTGGAATTCGAGGCCCAACACATCCGCTCGCTGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGGTGCAGCGGGCGCAGATCCGTGCTTCCCGTCTGGAGCAGATCGACAAGGAACTGCTGTCCGCGCAGGACCGAGTGCAGCAGACCGAGCCCCAGGCCTTGCTGGCAGTGAAGTCGATGCCCATGGACGAGGACGCTGAGAATGAGGTCCCCACGCACCCTGAGGATGGTGCCCCTCAGCCAGGCAACAGTAAGGTGGAGGTGGTCTTCTGGCTCCTGTCCATGCTGGCAACGCGGGACCAGGAGGACACGGCGCGGACGCTGCTCGCCATGTCCAGCTCACCCGAAAGCTGCGTGGCCATGCGCCGCTCAGGCTGTCTGCCGCTGCTGCTGCAGATCCTGCACGGCACTGAGGCCGGGGCCGGGGGTCGCAACGGGACCCCCGGGGCTCCGGGAGCCAAGGACGCGCGCATGCGTGCCAACGCAGCGCTGCACAATATCGTCTTCTCTCAGCCCGACCAGGGGCTAGCACGCAAGGAGATGCGCGTGTTACACGTGCTGGAGCAGATCCGCGCCTACTGCGAGACCTGTTGGGACTGGCTGCAGGCCCGGGATGGCGGGCCTGAGGGCAGCGGCACTGGTGCTGCGCCGGTGCCCATCGAGCCACAGATCTGTCAGGCCACCTGCGCCGTGATGAAGCTGTCCTTTGACGAGGAATACCGCCGAGCTATGAATGAGCTGGGTGGGCTGCAGGCAGTGGCGGAGTTACTGCAGGTTGACCATGAGATGCACAAGATGACCCGGGACCCTCTCAACCTGGCCCTGCGCCGATACGCTGGCATGACCCTCACCAACCTCACCTTCGGGGACGTTGCCAACAAGGCTGCACTGTGCGCCCGCCGGGGCTGCATGGAGGCCATTGTGGCCCAGCTGGCATCTGAGAGTGAGGAGCTGCACCAGGTTGTGTCTAGCATCCTGCGCAACCTGTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGCTGAGGGAAGTGGGCAGCATGACTGCCCTGATGCAGTGCGTCCTGCGAGCCACCAAGGAGTCCACCCTGAAGAGCGTGCTTAGCGCCCTGTGGAACCTCTCGGCGCACAGCACGGAGAACAAGGCGGCCATCTGCCAGGTGGATGGTGCCCTGGGCTTCCTGGTAAGCACACTGACTTACAAGTGCCAGAGCAACTCGCTAGCCATCATTGAGAGCGGTGGTGGCATCCTGCGCAATGTGTCCAGCCTCATCGCCACCCGCGAGGACTACAGGCAGGTGCTGCGAGACCACAATTGCCTGCAGACGCTGCTGCAGCACCTGACGTCGCACAGCCTGACCATAGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCCCCCGCGACCAGGAGCTGCTGTGGGACCTGGGCGCCGTGGGCATGCTGCGGAACCTGGTGCACTCCAAGCACAAAATGATCGCCATGGGCAGCGCCGCCGCGCTGCGCAACCTGCTGGCTCACCGGCCTGCCAAGTACCAGCCAGCGGCCACCGCGGTCTCCCCGGGCTCCTGCGCGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGCCGAGCTGGACACACGGCACCTGGCTCAGGCACTTGACCACCTGGAGAAGCAGGGCCTGCCGGAGGCCGAGACCGCCTGCAAGAAGCCCCTCCCGCCCCTGCGCCACCTGGACGGCCTGGCCCAGGACTACGCCTCTGACTCGGGCTGTTTTGACGACGACGATGCGCCCTCCCTGGCTGCTGCCGCCACTGCCGCAGAGCCCGCCAGCCCCGCAGTGCTCTCCCTCTTCCTGGGCAGCCCCTTCCTGCAAGGCCAGGCGCTGGCCCGAGCCCCGCCCACCCGCCGAGGAGGCCTGGAGGTGGAGAAGGAGGCCGGTGGAGAGGCAGCCGTGGCAGCTAGGGCCAAGGCCAAGCTGGCGCTGGCGGTGGCACGCATCGACAGGCTGGTAGAGGACATCTCGGCCCTGCACACCTCATCTGACGACAGCTTCAGCCTCAGCTCCGGGGACCCTGGCCAGGAGGCCCCACGAGAAGGCCGTGCCCAATCCTGCTCACCTTGCAGGGGGCCTGAGGGGGGGCGGCGGGAAGCAGGCAGCAGCCGGGCTCACCCACTGCTGCGGCTCAAGGCAGCCCACGCCAGCCTTTCCAATGACAGTCTCAACAGCGGTAGCACCAGTGATGGGCACTGTCCTCGCGAACACTCTCGGCCCTGCTCGCTGGCTGCTCTGGCCGAGCACCGAGAGGGGCCCCCACGTGGTCAGGCGCGGCCCAGCCGGCTTGACCTCAACCTGCCTGGAGGCCAGGCTGAGCCTGAGGCCCGGGATGCCAAGGCCACAGATGCCCACGTGCGTACCATCAAGTTGTCGCCCACCTACCAGCACGTGCCGCTGCTGGAGGGCACCACTAGGGCGGGTGCGGGGTCCCTGGCCCCTGGGGCCCGGAAACAGGCCTGGCTGTCCACAGAAGGCCTGAGCAGTGTGCCTGAGAAGCTAGTGGTTGAGAAGGCACCCCTCTGCCTGTCCCGCTGCAGCTCGCTGTCCTCACTGTCCTCAGCTGGCCGCCCGGGGCCCAGTGAGGCTGGGGACCTAGATGAGAGCGACTCATCCCTGGAGGGGCTGGAGGAGTCTGGCCCTGGTGAAACAGAGCTGGATGGGGCCTGGCGGGGCCCAGGGGCCGCCTCCCTGCCCATGGCCATCCCAGCGCCCCAGAGGGGTCGGGGCCTGGGGGTGGAGGATGCCACGCCGTCCAGCTCCTCTGAGAACTGCGTGCAGGAGACACCGCTGGTGCTGAGCCGCTGCAGCTCAGTCAGTTCACTGGGCAGCTTCGAGAGCCCATCCATTGCCAGCTCCATCCCCAGTGACCCATGCAGCGGGCTGGGCAGTGGCACGGTCAGCCCCAGTGAGCTGCCTGATAGCCCCGGGCAAACCATGCCTCCGAGCCGCAGCAAGACACCACCGCTGGCCCCAGCACCACCGGGCGAGCGGGAAGCCACCCAGTTCAGCCTGCAGTGGGAGAGTTACGTGAAGCGCTTCCTGGACATCGCCGACTGCCGGGAGCGCTGCCGGCTGCCCTCCGAGCTGGACGCAGGCAGCGTGCGTTTCACTGTGGAGAAGCCCGACGAGAACTTCTCGTGTGCCTCCAGCCTCAGCGCACTGGCCCTGCATGAGCTCTACGTGCAGAAAGACGTGGAGCTGCGGCTGCTGCCCCCTGCCTGCCCAGAGCGCGGCAGTGGGGGAGGCGGAGGCCCAGGGCACCGCCGACGGGATGAGGCCAGTGGCTGTCTGGAAGGGCCGGCGTCCACCGACCAGGAGCTGGAGCTGCTGCGTGAGTGCCTGGGTGGGGCCGTGCCTGCCCGGCTCCGAAAGGTGGCCTCAGCACTGGTGCCTGGCTGCCGCACGCTGCCCGTGCCAGTCTACATGCTGGTGCCTGCCCCGGCCCGTGAGGACGACTCCTGCACTGACTCGGCTGAGGGCACTCCAGTCAACTTCTCCAGCACCGCTTCCCTCAGCGACGAGACCCTGCAGGGACCCCCCAAGGATGGTGGGCGTTTGGATGGGAAGAAGCCCGTGGGTCGTGCTGCCTCCACTAGGCAGTCTGCTGGGCAGCGGCACAGGGTCGGGGGCATGGGCCGGAGCACAGAGCAGCCCCGGGGGGCTGGCAGTGGCAGGGCAGGGCTGGAGCTGCCCCTCCGGCGGCCCCCGAGCACCTGCAGGGACACTGACAGCTCCCGCCCAGGCCAGGAGCACGGGGATGGGGCTCTGCAGTCTCTCTGCCTCACAACGCCCACCGAGGAGGCTGTGTATTGTTTCTATGGCAATGACTCGGATGAGGAGCCGGCCACAGCAGTGGCAGCAGCACCCCCACGGCGGGCATCTGCGATCCCCCGGGCGGTCAAGAGGGAGCGCCCCACTGGTGCCAGGAAGGAGGTGCAGGCTGTGCCCAAGGCTGCACCCAAGGCGGCACCGCCTGCCCGGGCCCAGCCCAGCCTCATTGCAGATGAGACACCACCGTGCTACTCCCTGAGCTCCTCCGCCAGCTCCCTCAGCGAACCTGAGCCCTCCGAGTGCATGGCCAGTCGGCCCCGGGTCCACAAGCCAGGGCTCACCAAGGACCTGGTCCCTGGGGGCAGGAAGGATGGCTGCCCCAGCCCTCGGGCTGAGGCAGAGCTGCTCCGGCGTTGCATAGGCTCAGCCTTGCCCAGGCGCCAGCCCCAGGTGTCCGGCCCAAGGCGCCGCCCACCCCGAGAGGCCCAGCCAAAGGCGCGTGCAGCAGAAGGGCCCCGGGAGCGCGGTGAGGAGGCGGCCAGCTCAGACCATGCCTCAGACCTGGACAGCATCGAGTGGCGTGCCATCCAGGAGGGTGCCAACTCTGTTGCCACATGGCTGCACCAGGCCGCAGCGGCGGCTGCACGTGAGGCCTCCTCAGAGTCTGATTCTGTTCTGTCCTTTGCAACAGGGCAGTCTGTGGGTTCCACCCTGCAGCCCACTGTGCATAGGAAGGGGTGTCGGCCAAGGGCAGAGCGCCAAGCGGGTGGTGCCCTGCGGCCAGAGAAACCAGAAGGGGCCCTCACCCAGCGCAGCAGCGGGCCGGAGAAGCCGCGTGGCACTCAGAAGGCCCCAAATGGGGTGCCGGCGGTGCTCCGGGGACATACAGTGATCTACATGCCCACCCCGGCCACCCGGGCACAGCCCAGAGGTGCCCCTGGTTCCCGCATTGTGGCAAGAAAGATGGGAGCGCCCAGCCCCGTGCAGCCGGCAGCCCCCACCAAAGCCCCCAACCCAGGGCAGCAGCGGTCTAGGAGCCTGCACCGGCCTGGCAAGATCTCAGAGCTGGCAACACTCAGCCCCCCGCAGAGAAGTGCCACACCACCAGCCCGCCTTGCCAAGACCCCATCGTCAAGTTCCTCTCAGACCTCACCGGCCTCCCAGCCTCTGCCCAGGAGGTCACCCCCTGCTGCCCAGCCTGCAGGGCCCCTGCCCGGCCCCAGGGCCTCCCCAGTGCCCAAGACTCCAGCAAGGGCCCTGCTGGCCAAGCAGCACAAGACGCAGAAGTCACCCGTGAGGATCCCCTTCATGCAGAGGCCTGCCAGGCGGGGGCCGCCGCCCTTGGCTAGGGCAGCCCCGGAGCCAGGCCCCAGGGGCCGGGTGGGCGCAGAAGGCGGCTCTGCAGCCCGAGGGGGCCGCCTGGGCCTGGTGCGCGTGGCCTCCGCCCGCTCCAGCGGCAGCGAATCCTCCGACCGCTCGGGTTTCCGGCGGCAGCTGACCTTTATCAAGGAGTCGCCGGGCCTGATGCGGCGCCGACGCTCGGAACTGTCCGCACCCGAAGCCACCAACCCGACCACCCAGGCTGCCTCGCCCTGCCGCGGCCGGCCAGCACTACCCGCTGTCTTCCTCTGCTCCTCGCGCTGTGATGAGCTGCGGGCAGGCTCCCGGCAGGCCCCGGCCCCGCAGCGGGCCCACACGGCCCGGCCCCGCCCCAGCGAGCGGCAACCTCGGCGCACCAGCTCCGAGAGCCCGTCCCGCCTGCCCGTCCGCACGCCGGCCGCCGGGCCCGAGACGGTCAAGCGCTACGCCTCCCTGCCTCACATCAGCGTGGCCCGCAGACCGGATGCCACCATCCCCGAACCTGCGGCGGATGCCACCCGCCGCAGCAGCGCAGGGGAGGCCGGGCCGCTGCCCAGGGTGGCCGCGCCGGGCACCACGTGGCGCCGCATCCGGGACGAGGACGTCCCGCACATCCTGCGGAGCACGCTGCCCGCCCGCGCCCTGCCGCTGCTGGGCTCCCCGCCGGAGGACGGCCCAGCCGGCCCACCACAGCGCAAGACCAGCGACGCCGTGGTCCAGACTGAAGACTTCGCGGCTGCGAAGACCAACTCCAGCACGTCCCCGAGCATGGAGAGCAGGGCGCCCCCCGAGGCCACGGCCGGCGGCCCCACCTCCCTTCTTGGCAGCGACGTGGACGGGCCGCCCTCCAAGGCGCCCGCACCCATCCCCTTCGTCCCCGCCAGCCGGCACGGCTCCCCCAGCCGCTCCGCCCGTGTCCCCCCTTTCAACTACGTGCCCAGCCCCATGGTGGCGGCCACCGCTGACTCCACCGTGGAGAAGGCCCCCACCCCGGTCCCCACCAGCCTCCTGGAATAGTGGCCGGGACTGGACTTCCAGAACATCTTCTCCTGGCCCAGGACCGTCTGGCTGCCCCTAGGGTGGTCCCAGGACCCGCCTGCCACCCCCAAACCCAGGGCCCCGCCCTCCGAGCCTCACCCCTGCCCACACGGGCCTCGCACTCCCGCGTAGACGCTTGCTTTTGAGCCGAGGCGGCTTCGGGAGGAAAGTGAGCTACGAGCTGGAGCGCGCGTCACCGCAAGGGGGCGCCCACGAAGCCCTGGCGCCCGCGCGGAGACCATCCTCCTGGCTAGGGCCGTCCTCAGCGGTGCCCTTCTGGGTTCCTCGCCCTGCCGGGCCCTGCATTAGCACCACACTTGCTCCCCTCTCCTCTGGGGAACGCATGGGGAGGAGGGGGCGGGAATGACAGTGCCCGCCGAGGTGGGGAAGGGGCTGGGAGGGTGGCGGCAGCAGGAGCCTGCCAGCCGAGGGCGGCGGCTGCGCATGCGCAAGAGAAAGCCTGTAATTACGGGCAGGGCCGGGTAATTGGTTAACTATGGCTTAGCTGGTTTGTTTGCGGTCTCGGCCTCAGCTGGGGGCGTGCGAGAGGGGCGTGCTGTGCCAGACAGAAAGGCCGCCCCAACCCCAGACAGACACGCGCAGGGAGCCTGGAGCACCCCAAAACTGGTCGGGGGAGCTGGGTACACAGGGCGTCCCCGCAGCCTTCGTAAGGAACCAGGAGAGGCAGGCGTGCCGGGAGCGCCGTGGCTGAGGAGAGCGAGAAACGGAGGGGAGGCCGGGGCCTAGCCACCGCCCGGTAGCCAGGCCTGGACTACGGGACCTGGATTGCGCTCTGCGGGAAGTGGTCCCCGCGGGCGCCTGCCTGGTCCCAGGTCTTTGCCTTTTCACCGAGTCTCCTGTTCTTTGGATCTGCGGGCTCCGTGGGGCGTGGCCTCCTCCCAGGGGCCAGCACACCTGCCCGAACAGCCGATCCCACTTCCCTGAGGAGCCCGGCTCTGCTCTCAGCCGCCCTAAGGATCTGCAGTCACACCGCCCTGCCGAGCTGCTCTGGGGGCCGGGAAGTGTGCCGGTTCCTGTCTCTTCTCTGGGAGGAGGGGAGCAGAGCCAGGTGGAGAGGACGTGCTGAAGGAGCCCTGCCTCTGCCCCCCTCGGACGCTGTGCTGCCGCTCCTTAAGATACACACGCTGCGACATCGCGTCCCGCAGGCCAGGGTTCGGAAGAAGGACGCAGGAAAGGCTGCACCACGTACTCCTCCTGGGGAGAGCGAGCCTGGGAAAGCGATGGGGACTGAGCAAGCGCTAGAACAGCCACTGCTGACCCTAAGGCCCCTCTCCAGGGCGGATAAGACACCTCTGCAAACGGCTGCTCCCATCCTATCAGCAGCCAGAAGGGGGGAGTGGCCTTCTGAGCTCCTTCTCAAATGTGGGGGCTGCAGAATGTTGCACCCCATCATCACAGGCGAGCCACCCCTGGAAATGGAGAAATGCTGCCAGCTTGCCAAGCTGTGGGGGCCTGGAGTGGAAGCCCCCGTACTGAGTCCCAGGCTGTGCTCTGGCAGCTGTGTGCCTGCTTCCCCACGTGGGCCGTGGGGAGCTACCTCTGGGTTCAGCAGGTCGGCTGCCATGACGGGGCAGAGGACCCTCCCGGTTGGCTGCCCCTTGCCATTCTCTCCACAGGCAGGGGCAGGGCCCGAGCCATCCCATCCTATCCAGCGCCCACCCTGCCACCTCCATCTATCACAGCAGCGGTCCACACAGCCGCTGGGCTGGTGGGAGCCCGAGGTCCTGATTAGAGTGGCTTCCTGGAGGAGGCAGTGCTGGCCACCGCTGGACAATCAGCCTGAGGCCAGAGCTTGGAGGAACAAAGTCCAAGGACCGCAAACACTCCTGTGAAGCCCTGACCCGAGAGACACAGGGCACCCAGGCCAGACCTCGGCCCGGAGCAGATGGACACTGCGAGCTGGGTGCTGACTTTGGGGCACTACCTCACCACGCTGCCGCAGCCTGAGCCTGGTTGTCTTGGCTTGTTCCCTCCCCGCCGTCTCCATCCCAGGTGCCACAGGACACCTGTAAATACGTACAGCCCCCACCTGTAAAGCCCCCACCTGTAAAGCCATCACCTGGCGGAAGGAGGCCGCAGA EMBV3_37743 AGTGGACCGCTTTGGGGCAGGACTTATGAGATATATAAAGAAGTCTTCCTTTGAATTCAT Variant GeneID:327689|CPSF2:NM_175808:139_cdna 138^256 3 EMBV3_07307 GeneID:327689 21 GENE CPSF2 NULL cleavage and polyadenylation specific factor 2, 100kDa EMBV3_00339 TGATGGCTTCATTGAGGATAATTACATTCAGCCTGGGTTTGGTGGGCTGGAGACAGGGGC Gene GeneID:509100|C3H1ORF210:NM_001081517:107_cdna Constitutive 1 NULL GeneID:509100 3 GENE C3H1ORF210 MGC148971 chromosome 1 open reading frame 210 ortholog EMBV3_00768 CCAGGGTCAAGGTGGTTTTGCCTTTTCTTGATGCTTTTTCAAGGCTTATTGGTTGAGCAG Gene BVV0102_439898 + 0 NULL GK000006.2:70656178-70656580 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205508 TCONS_00205509 1 XLOC_124666 Coding TCONS_00205508 XLOC_124666 Coding Coding LNX1 6:70655633-70761805 j TSS153447 3338 1 TCONS_00205508_6 617 10 0.968654340639158 0.000216089130612421 0.000234247398509602 0.000235833038952796 0.000151126067152098 0.000221720998575883 0.000323452968131691 0.000206476975578529 0.000269142947608825 0.000438308431600307 0 2.24906847036214e-133 0 7.75691087444281e-05 0.000278110070438837 4.45759152125023e-05 6.63694164591068e-05 0.000621715893817506 3.45963551722608e-17 0 0.000338870106971712 0.000293311674588529 0.000349436451011707 0.000182993213884488 0.000436346129456213 0.00050693298397694 0.000205917748950855 0 8.63257293381412e-06 1.03172658417499e-05 7.8702560355457e-05 XM_005207968.1 LNX1 PREDICTED: Bos taurus ligand of numb-protein X 1 (LNX1), transcript 0.0 4080 99.96 0.678250449370881 NM_001126328.2 LNX1 Homo sapiens ligand of numb-protein X 1, E3 ubiquitin protein ligase (LNX1), transcript variant 1, mRNA. 0.0 2679 84.44 0.726482923906531 TCONS_00205508_6 sp|Q8TBB1|LNX1_HUMAN LNX1_HUMAN E3 ubiquitin-protein ligase LNX; 0.0 1102 87.60 0.990275526742301 3 coding 0 0 0 0 -0.0865234069748195 0.572706256779984 -0.0263523804949133 0.571073973076458 TTTGCTGCAAGTTTTGCCTGGGTAGGGGAGGTGTTGCCTGCAGGGGTGTGGGTCTGGGGTCAGAGATGAGGTGGATGCAGACACATGCTGACACAGGGCCAGGGCCAAGACTGCAGCCACACCAGACAAAAGAGCTGCAAAGGTGCCTCCCACTACGGCCTCACTAAAGACAGGAAGAGGCGCTCTCAGGATGGCTGTCCAGATGGCAGCACCAGCCTCACAGCAACATCACTATCCCCAGAGATTTCCACAGTTCCCACCGTCTCCTTAATGACAGATGAGCCTGGCCTAGACAACCCTGCCTACGTGTCCACAGCAGAGGATGGTCAGCCAAATAGCCCCCTGGACTCTGGCCGGAGCAACCGAACAAGGGCACGGCCCTTTGAGCGATCCACCATCAGAAGCAGATCCTTTAAAAAAATAAACCAAGCCTTGAGTGTTCTTCGAAGGACAAAGAGTGGAAGTACCGTTGTCAGCCAAGCTGACCAGGGACGAGAGGATTCTGAAAATACCACTGTCCTTGATGTCTTTCCAAGGTTGTATCACCTGATTCCAGATGGTGAAATTACCAGCATCAAGATCAATCGAACGGATCCCAATGAAAACCTCTCCATTAGGCTTGTGGGAGGCAGTGAAACCCCTCTGGTCCATATCATTGTCCAGCACATTTATCGTGATGGGGTGATAGCCAGAGATGGCCGGCTCCTGCCAGGAGACATCATCCTAAAGGTCAACGGGATGGACATCAGCAATGTCCGGCACAACTACGCCCTGCGCCTCCTGCGGCAGCCATGCCAGGTGCTGCGGTTGACCGTGCTCCGGGAGCAGAAGTTCCGGAGCAGGACAGACGGACAGCCCCTGGATACCTACGGGCCCCGGGATGACAGTTTCCACGTGATCCTCAACAAAAGCAGCCCGGAGGAACAGCTTGGAATAAAACTGGTGCGCAAGATGGATGAACCTGGGGTGTTTATTTTCAACGTGCTGGACGGTGGCGTGGCAGACAGACACGGCCAGCTGGAGGAGAATGACCGTGTGTTAGCCATCAACGGGCATGACCTTCGGTACGGCAGCCCAGAAAGCGCAGCTCATCTGATTCAGGCCAGTGAAAGGCGTGTTCACCTCGTCGTATCCCGCCAGGTTCGGCGGCACAGTCCTGACATCTTTCAGGAAGCCAGCTGGAACAGCAACGGCAGCCAGTCCCCGGGGTCAGGGGACAGGAGCAACACTCCCAAGCCCCTCCATCCTGTGGTCACTTGTCATGAGAAAGTAGTAAGTGTCCGAAAAGACCCTGGTGAATCACTCGGCATGACCGTTGCAGGGGGCGCATCACACACAGAGTGGGATTTGCCCATCTATGTCATCAGTGTTGAGCCCGGAGGAGTCATAAGCAGAGATGGAAGAATAAAAACAGGTGACATTTTGTTGAATGTGAATGGGATTGAACTGACTGAAGTCAGCCGGAGTGAGGCAGTTGGTTTATTGAAAAGCACGTCCTCCTCAGTGGTACTGAAAGCTTTGGAAGTCAAAGAGTATGAGCCCCAGGAAGATGACAGCAGCCTGGCAGCCCTGGACTCTGACCAAGACACAGCCCCACCCAGCGACTGGTTCCCCTCTTGGGTCATGTGGCTGGAATTACCGCGGTACCTGTATAACTGTAAAGATGTTATATTACGAAGAAATACAGCTGGAAGTCTAGGCTTCTGCATCGTAGGAGGTTATGAAGAATACAATGGGAACAAACCTTTTTTTATCAAATCCATTGTTGAAGGAACACCAGCATACAATGATGGGAGAATCAGATGTGGTGATATTCTTCTGGCTGTCAATGGTAGAAGTACAACAGGAATGATCCATGCTTGCTTGGCAAGGATGCTAAAAGAACTTAAAGGAAAAATAACTCTCACCATTGCTTCTTGGCCTGGCACTTTTTTATAGAATGAATGATGGGTTATAGAAAAATAGGAAATCACAAGTAAGCTAAGTTGAAACAATGTATTTATCTTGTCAAATTTTTTTTTTATTTGAAGGCTATACTGTAAAAATATTAAACTGTAACATCAGGAAAAGTAGGATCTAATGAAAGCCAATTACACCTCAGAAAATGTAATTCTCAAAACATAAACATTACTAATTTTTATGCAGTGTGGAACATTTCTCATTACTCCACAGCTAAAATTTTCTATTCACTATAAAGCTCTTCAACAGCTGATATGGTTTGTATGCTCCCACTGAATTTAAATCATACAGTTTAATTAAAATTTGGTATGTGCTGAGGTCTGTAAAGCATTCATTATGGGCATTTTAAAAACAATTTCCAGACACAGGATTATAAAAGTGCACTGCTGACAAGTGTTCATCAAATGAGAAATAAATATTTTTCAAAAATTATATAGCTGTCCTTTAGTATGTGATACTAAGTGCATTTCTACCATCACTATTTAAAAGTTCCTAGTAATTCATTCTTTTAAAGCCATGTTGTTACCTTCACTGACAAACACCTCCTACGGGTTATCCCTAAAAATGTTCACAGAATTTTGTAAACTTGTATTTTCTTAAATGTTACAGAAAATTACTAAAGCTCTTGTCATTTATTTTAATTCACAATATAGCTAGTAACTGTAAAAACCCAACATGCTGCTCAACCAATAAGCCTTGAAAAAGCATCAAGAAAAGGCCAAACCACCTTGACCCTGGTTTGGCTCATGGAAGATGGCAGTGAGGCAGTTCAAATTTTTGTCAGTGATGAGTATCTGTCCATATGCCTGCTCTCTAGAAACTACAAGTTATTTTAGAGGCAACCCAAATGCCATTAGATTTTATTACTGTGGATATAAAAATTCCCTACTTAGTTTCACCATAAACCCAAATTTAGAACACTGAAAACCTGCTATAAAAAAGCTGTGATATCAAAATTGTATACGAGTTTTTTAATATGCAAAACCACAGTGCCACAACAGTGATGAGAAAAGACTAGTTTTAATCTCAATACGCAGAGGTACCTTTTGATGCCTTTTGCAGTGCAACCTCATAAGAGACTGGTATTTGATTAAGTCAAGAAAACCGGCCAAGACCTCTTCTGTGGGGGCTGACCCACTCTCTTGCCCCGAAAGTGTACTGCTTGCCCGATAAATCTTGCCTGCTTGAGCTGTAAAAAAAAAAAGAAAGAAAGAAAACTGGCCAAGAGGGAACCTTGACTTTTATCAGATATTGTGTATGTACACAGCTAAACATAGCTCTTTAAATTCTCTGCTGAGTAACTCATTCATATTACTTTCTTCCATACAAAGTCATTACTGCCTTTTTATTTTTTAAATATTACAAGACAAAAATTTTAA EMBV3_21239 AGGCGACCTGGTGGAGAAAAAGGAGGGTCCAAAGGGATAGAGAGCAGTCAAGCCAGTAAT Gene BVT0102_381545 + 0 NULL GK000010.2:27363503-27407101 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00010779 TCONS_00253025 TCONS_00062753 TCONS_00250197 TCONS_00207277 TCONS_00124927 TCONS_00199803 TCONS_00064414 TCONS_00115687 TCONS_00152859 TCONS_00231502 TCONS_00123169 TCONS_00199063 TCONS_00186108 TCONS_00165813 TCONS_00136848 TCONS_00248863 TCONS_00109859 TCONS_00023615 TCONS_00252354 TCONS_00009883 TCONS_00135547 TCONS_00010052 TCONS_00006222 TCONS_00223827 TCONS_00218899 TCONS_00251930 TCONS_00161793 TCONS_00219680 TCONS_00175545 TCONS_00040583 TCONS_00055867 TCONS_00208127 TCONS_00117484 TCONS_00040195 TCONS_00244654 TCONS_00238457 TCONS_00123618 TCONS_00250854 TCONS_00032143 TCONS_00249989 TCONS_00207068 TCONS_00190323 TCONS_00152628 TCONS_00072815 TCONS_00177280 TCONS_00189806 TCONS_00206861 TCONS_00064927 TCONS_00185582 TCONS_00253665 TCONS_00062743 TCONS_00122096 TCONS_00187057 TCONS_00133066 TCONS_00125001 TCONS_00063180 TCONS_00245928 TCONS_00107574 TCONS_00153219 TCONS_00009591 TCONS_00250099 TCONS_00208547 TCONS_00010466 TCONS_00244651 TCONS_00223462 TCONS_00124845 TCONS_00088087 TCONS_00030942 TCONS_00142124 TCONS_00006827 TCONS_00157440 TCONS_00160965 TCONS_00206887 TCONS_00022065 TCONS_00250881 TCONS_00064461 TCONS_00201733 TCONS_00238326 TCONS_00167497 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00176993 TCONS_00179470 TCONS_00244653 TCONS_00222115 TCONS_00056147 TCONS_00054954 TCONS_00110327 TCONS_00070840 TCONS_00154085 TCONS_00063487 TCONS_00175199 TCONS_00224114 TCONS_00047158 TCONS_00030941 TCONS_00050046 TCONS_00156870 TCONS_00116696 TCONS_00240475 TCONS_00249570 100 XLOC_131641 XLOC_006330 XLOC_155966 XLOC_037480 XLOC_153140 XLOC_125795 XLOC_076470 XLOC_121455 XLOC_039138 XLOC_069856 XLOC_092624 XLOC_140991 XLOC_074723 XLOC_120716 XLOC_112161 XLOC_100653 XLOC_083059 XLOC_151806 XLOC_065763 XLOC_014282 XLOC_155295 XLOC_005436 XLOC_081770 XLOC_005604 XLOC_001785 XLOC_137126 XLOC_132218 XLOC_154871 XLOC_098678 XLOC_132999 XLOC_105326 XLOC_024399 XLOC_033675 XLOC_126640 XLOC_071650 XLOC_024012 XLOC_150512 XLOC_145124 XLOC_075170 XLOC_153797 XLOC_018386 XLOC_152932 XLOC_125587 XLOC_116358 XLOC_092393 XLOC_044583 XLOC_107054 XLOC_115843 XLOC_125381 XLOC_039651 XLOC_111635 XLOC_156604 XLOC_037470 XLOC_073652 XLOC_113105 XLOC_080989 XLOC_076544 XLOC_037907 XLOC_150855 XLOC_063484 XLOC_092984 XLOC_005144 XLOC_153042 XLOC_127060 XLOC_006017 XLOC_136762 XLOC_076388 XLOC_052874 XLOC_017192 XLOC_086549 XLOC_002389 XLOC_095895 XLOC_097858 XLOC_125407 XLOC_012736 XLOC_153824 XLOC_039185 XLOC_123378 XLOC_144993 XLOC_102333 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_106767 XLOC_109243 XLOC_135424 XLOC_033950 XLOC_032763 XLOC_066231 XLOC_042617 XLOC_093846 XLOC_038214 XLOC_104982 XLOC_137410 XLOC_027294 XLOC_030177 XLOC_095330 XLOC_070862 XLOC_147139 XLOC_152513 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_11625 CAGGCAGTAACAAGACCGTGGAACCTCCCATTAGCCAAGCGGGAAACGTAGACACTGTTT Gene GeneID:541016|SFRS15:XM_002707686:120_cdna Constitutive 0 NULL GeneID:541016 1 GENE SFRS15 NULL splicing factor, arginine/serine-rich 15 EMBV3_37917 CCCTCAGAATTTGCTACGTACTTAAACTATTGTCGTGGACTGCGCTTTGAGGAAGCCCCG Gene GeneID:613515|LOC613515:XM_002699826:87_cdna Constitutive 0 NULL GeneID:613515 X GENE LOC613515 NULL similar to casein kinase I alpha LS EMBV3_23225 GGACCTGTCCTAGATGTCTGCTGGAGTGATCACGATGCTCCTGTCAAAACAGTACATTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27886 CCTGACCACGCAGCTCCTTGATGCCTTATCCCTTAGTTTCAACACCAGGCTGAAGTGGTT Gene GeneID:100140839|LOC100140839:XM_002694389:238_cdna Constitutive 0 NULL GeneID:100140839 17 GENE LOC100140839 NULL similar to pRGR1 EMBV3_37069 TTAGATTAAGGAGCTTTCTTACCTTGAAACCCCTTGAGCAACTGTGACCTAAAACCAGAG Gene BVT0102_203946 + 0 NULL GK000001.2:81060999-81097628 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008855 1 XLOC_004412 NonCoding TCONS_00008855 XLOC_004412 NonCoding NonCoding - 1:81065523-81065971 - TSS5932 448 1 0 0 0 0 0 0 0 0 0 0 0 5.10977204319323e-06 0 0 0 0 0.000117908926249397 0 0 0 0 0 0 0 0.000374211133382505 0 0 0 0 0.000108361593857872 0 0 noncoding 0 0 0 0 AATGCCAGACATTTTCTGAGAATGGAGGTCAGAGGTCCTTGTTGGCTCATCCAAAACCTACTAAAAATCTGGGATCCAGGAAACTGAAGAAAATACTTAATTAGAAATGTGGCCAACAGTTAAGTCTCACTTGAGTCTTTACCATGAATCAGTCAACCATGGGGGAAATCAATCAACAATTAACACCTAATTGTTGAGTGATTTCCTTAGGTTTAGCACTACTGTTAAATGCTGTGGAGGATTTCCAGAGTATCTTAACAGGAAATAATCAAGGACTAAAACTCTGGTTTTAGGTCACAGTTGCTCAAGGGGTTTCAAGGTAAGAAAGCTCCTTAATCTAAAATTCAGCAAAAATCCAGACCCACGTACCCTGCAAGTCTAAAATGTATTTCAAATAAATGCTGTGTTTACTACATTTTCAAGTGCTTACTCAATAACATTAATAAAT TCONS_00004197 TCONS_00004198 . 5' 1387 TCONS_00004197 TCONS_00004198 . 5' 1387 EMBV3_31207 AGCTCCAAGCAAAAACCTGAACCCCAGAGAGATCAAGGATTCAATGGACAATATCAAGAG Gene GeneID:280822|IL2:NM_180997:5_cdna Constitutive 0 NULL GeneID:280822 17 GENE IL2 IL-2 interleukin 2 EMBV3_11189 CCCTTTGGTGTCATAGACGGCATGTTTTCTACCTTCAGCATCACTTAAATGCAGGCCCCC Gene GeneID:784830|PTAR1:XM_002689635:9_cdna Constitutive 0 NULL GeneID:784830 8 GENE PTAR1 NULL protein prenyltransferase alpha subunit repeat containing 1 EMBV3_31012 GGACTACATGCAGCAAACTGGAGGTCAGGCACATCTCTTCTTTTGGATGACAGTGGAAGG Gene GeneID:532001|SNX13:NM_001077987:38_cdna Constitutive 0 NULL GeneID:532001 4 GENE SNX13 MGC142644 sorting nexin 13 EMBV3_15271 CCACACCACTGCTCCAGCGAATTTATACTACGACTGGTTACAATGGCCAGAAGCCTGAAG Gene GeneID:538959|EPB41L2:XM_002690221:10_cdna Constitutive 2 NULL GeneID:538959 9 GENE EPB41L2 NULL erythrocyte membrane protein band 4.1-like 2 EMBV3_31732 CTTGGTGGGCCAGTCATGTCCTTTACCACTGTGCCTTAGAATCGCCCATAGACAGACCCT Gene BVV0102_079052 + 0 NULL GK000025.2:21388540-21442011 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146503 TCONS_00146502 1 XLOC_089120 Coding TCONS_00146502 XLOC_089120 Coding Coding - 25:21399491-21422246 - TSS109513 2780 1 TCONS_00146502_4 365 17 0.878570800738332 0.006022221706053 0.00512361086606536 0.00655102661774531 0.00337188038734596 0.00580739746986716 0.00160323892115351 0.00238114649763658 0.00309210502393593 0.00237696626729828 0.000962585969210669 0.000974137135596542 0.000196791287679425 0.000298281606356564 0.000961066926541943 0.000824168603001013 0.03994989631831 0.0172125608905926 0.0461466499311094 0.00926675320025603 0.00554721953760685 0.00239691877681272 0.0152306077148401 0.00604704987500343 0.0158973281970012 0.00674736390270623 0.00485867262731449 0.00486857822599188 0.00365376312587791 0.0017645996292116 0.0070939482411986 XM_003584033.2 GGA2 PREDICTED: Bos taurus golgi-associated, gamma adaptin ear containing, ARF binding protein 2 (GGA2), mRNA. 0.0 4973 99.71 0.997841726618705 NM_015044.4 GGA2 Homo sapiens golgi-associated, gamma adaptin ear containing, ARF binding protein 2 (GGA2), mRNA. 0.0 3128 85.26 0.984532374100719 TCONS_00146502_4 sp|Q9UJY4|GGA2_HUMAN GGA2_HUMAN ADP-ribosylation factor-binding protein GGA2; 0.0 650 89.07 0.997260273972603 2 coding CCCTGCCGGTTGTCTGTGTGCTGCGTCCCATCCTCAGGAGATAAAGCCACAGACCCAAGCATGTCAGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGACCAAGTGAACACTGATCCCAACGGCTCAACCTATGCGCCCTGGCTGCTGGCCCACAAGATCCAGTCTCCACAAGAGAAAGAAGCTCTTTATGCCTTAACAGTGCTGGAAACGTGTGTGAACCACTGTGGGGAGAAGTTCCACAACGAGGTGGCCAAGTTCCGCTTCCTGAACGAGCTCATCAAAGTGCTGTCCCCAAAGTACCTAGGCTCCTGGACTACAGAAAAAGTTAAGGGAAGAATCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCAGAGGACATCAAGATCCGAGATGCTTATCAGATGCTAAAGAACAAGGAATCATAAAGCAAGACCCTAAACTTCCAGTGGATAAAATCTTGCCCCCACCTTCTCCCTGGCCCAAGAGCTCCATCTTTGATGCTGATGAAGAAAAGTCAAAGCTTCTGACAAGGCTTCTGAAAAGCAACCATCCTGAGGATCTTCAGGCTGCAAACCGGCTGATCAAGAATTTAGTCAAGGAGGAACAAGAAAAATCGGAGAAGGTGTCCAGGAGGGTCAGTGCTGTGGAGGAAGTTCGGAGCCACGTGAAGGTGCTGCAGGAGATGCTGAGCACATACCGCAAGCCGGGACAGGCCCCGCCAGACCAGGCGGCCTTGCAGGTCGTGTATGAGAGGTGTGAAAAGCTGCGGCCCACCCTGTTCCGGCTGGCGAGTGACACCACTGACGACGATGAGGCGCTCGCGGAGATTCTCCAGGCAAATGACCTCCTCACACAGGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGTGTCACCTTTGGGAACACGGTGGACAGCTCTGTGGGAGACATACCTGTGTCCAGAGTCTTTCAGAATCCAACAGGCTGCGTGAAGAACTGCCCCCTGATTGACTTGGAGGACAGTGGGTCTGAGCAGGCTGGGGCTGTGACGCCATCTTTACTGCATCAGGACCTGGCAGCCTTAGGAATCAGTGATGCCCCAGCTACAAGCAGGGTTGCAGGTCAGAATTGCTGTCAGGAAAAGAAGAACCCCACCACCAGCGCACTGCCAGCTGGTGGTGCTCAGAGCCCTTCTGCAGAAAGGAACTTGCTGGACCTCCTCTCCCCACAGCCGCCTCCGGGATCTCTGAATTATATTCCACAGAAAAGTATCCCCAAGGAAGTACCACCAGGTACCAAGTCCTCTCCAGGTTGGTCCTGGGAGGCCGGCCCATTGGCTCCTTCCCCATCTTCCCAGAACACTCCTCTGGCCCAAGTGTTTGTCCCTTTGGAGTCTGTTAAGCCCAGCAGCCTGCCGCCTCTTATCGTGTATGACCGGAATGGATTCAGAATTCTGCTCCACTTTTCTCAGACTGGAGCCCCCGGCCACCCAGAGGTGCAGGTGCTCCTGTTGACCATGATGAGCACGGCCACCCAGCCTGTCTGGGACATCATGTTTCAAGTGGCTGTGCCAAAGTCAATGAGAGTGAAACTGCAGCCGGCGTCCAGCTCTAAGCTTCCTGCTTTCAGTCCTTTGACGCCTCCAGCTGTGATCTCTCAGATGCTGCTGCTGGACAATCCACACAAAGAGCCCATCCGGTTACGGTATAAGCTGACATTCAACCAGGGTGGACAGCCTTTCAGCGAAGTAGGAGAAGTGAAAGACTTTCCGGACCTGACAGTCTTGGGTGCAGCCTGACTCCTCCCAGGACAGAGCTTGCCGTTCACGCTTAGGCTAATGTTCCTTTTGCTGTCTAGATAGGACTGATCATGGTGATTTAGTGCAGAGTGCCAAGAGTTCTGTCCTGACATCAGGCTCTGGATGCCAGCCTCCGACTTATTCTGCAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCCAGGGGGCTCAAGGGGAGGGATGAAGGCAGTGTGGGAAATGCTAAAACATTTCTGATAACCATCTGCTGCGGTCATGTCTGGTTTTGCACGTTGGTGGACACTGATGTCCCTGCCTCAGGTTGGAGGTTTTATAAGCCAAAGTTGTCACTGTTGTTTTCCATGTATTATTACCTTTTCATTCATCCACTCTGTGCCTTGTCAGCCTCTGAAAGTCTTGGTTGCTCCCAGGCTGCTGTTCTCAGGGACCCATAAGGGACCTGGTGGTTCTTGGGGCAGAGTGTCTTCTGGGATGCTCTCTTCCAAGAAGGACCTCGTCTCCATTTCCATTAGCAAATGCTGCTTGCATGTGTCCCGGAAGACCTTCTGAATGGAACGCTTGTTGCACTGTGTCCTAGGCGAGGGGTTGCCACTGGACCAGAGGACCGCGCTTGGTGGGCCAGTCATGTCCTTTACCACTGTGCCTTAGAATCGCCCGTAGACAGACCCTGGAGGGCAGAGGGGAAAGCAGATCCCAGGCCTTATGCAGGCCTCAGGTTCCATGGGCTGGGCAGCCTGTCTGGACCCTTCCTCAGGACCCTCATCTCCATCCTCCTCCTCTTTCTCTGCAACCATTTACCCAGAACTCTTTGAAGGTGACACAATGCCAGTCGTTGTAAGTCATAACTGACAGGTTCACCCTGGCCTGTCGACTTCACAATCCACGGTGAAGAACTGTGATGCAAATGAGATACGAAAAGAGTTTAGCAATGATTCAAGTGGTGACTAAATCTAGAAAGTCATTGAATAAATACCTGTGTAACAAATATAC TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 s 5' 0 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 TCONS_00146503 s 5' 0 EMBV3_08858 ATGCATGAGGAGTACGTCCCTCCTTAAAAGGACCCTGGAACAAATCATACTGTAGGAGGG Gene GeneID:100299118|LOC100299118:XM_002694248:214_cdna Constitutive 0 NULL GeneID:100299118 16 GENE LOC100299118 NULL hypothetical protein LOC100299118 EMBV3_20332 AGGACTTTCCTGGTGGTCACTGGTTAAGAGTCTGCCTTCCAACACAAGGGATGTGGGTTC Gene BVT0102_042113 + 0 NULL GK000018.2:40575334-40683381 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090057 1 XLOC_054838 NonCoding TCONS_00090057 XLOC_054838 NonCoding NonCoding - 18:40578886-40579607 - TSS67403 721 1 TCONS_00090057_1 101 0.413314840499307 1 0 0 0 0 0 0 0 0 0 0 5.70664673188446e-06 0 0 4.77551406822638e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 8.12642219770584e-06 0 0 0 NM_001135640.1 CNGB1 Bos taurus cyclic nucleotide gated channel beta 1 (CNGB1), 1e-17 95.1 80.77 0.141470180305132 0 noncoding CTGAGGCCTGAGCCGGGAGTAGCCCTGCAGTGGGGACTCCAGGAACACGTGGCACTTGCTCTGAGGTGCTCTTAGCCTCCATAGGCTCCTCCCTGCAAGCCTGCTCCCTGGCCCTCCCTAGGCTTCAGCTCCATCTCACTCCTGCCCTTCCTGGGCAGCCTCCTGGAAAGTATCATATACACCTGCTGTCCCTCCTCCTTCAAGCTCCTCCAGTGGGGCTTCTGCCCCGCTCACCACACACTAGCCTGCCAAGGCCACCTGAGATGGCCATGTGGCAAAGCTAATGGTCATGTGGTACTCTTTAGCCTTCATCTCACGGGGCATCTTTGCCACACTTAGCACGGCTGACCCCACCTTCCTTCCAAAAACCTTTTGCCCTCCCTTGACTTCTCACACAGACACACTGGCTGGCCCCGTGGTAACCCTCCCTAATCCCACAGTGTCTCTTTCCTCCTCAAAGGAAACCACCACCCTGAGGTCCAGGTGGATGATTTCCACACCTATATTTAGAATTCTATCATTTATATCTGGATTCATAAGCAATAGATTTACAGAAACACTGCTTTGGGTGTTTTTAAAATTCACATAAGTGTAATAGAACTTCACACATCAGGACTTTCCTGGTGGTCACTGGTTAAGAATCTGCCTTCCAACACAAGGGATGTGGGTTCGATCCATGGTCTGGGAAGAGTCCATCTGCCTTGGAGCAACTAACCTTTTG TCONS_00083216 TCONS_00083217 TCONS_00083219 TCONS_00083220 TCONS_00083222 TCONS_00083223 TCONS_00083224 TCONS_00083221 . 3' 2522 TCONS_00083216 TCONS_00083217 TCONS_00083219 TCONS_00083220 TCONS_00083222 TCONS_00083223 TCONS_00083224 TCONS_00083221 . 3' 3242 EMBV3_20252 ACCGAAGGGATCAGTCTTTGCAACTCACCGTCCGGTTGCCTGTTACCGAATAACTCTTCT Gene GeneID:527679|MBNL2:NM_001099710:52_cdna UTR3_Alt 3 NULL GeneID:527679 12 GENE MBNL2 NULL muscleblind-like 2 (Drosophila) EMBV3_12103 TCGTATCACCGCTGGGGCTCTTATCATCGCTGGGACTCGTATCATCGCTGGAGCTTTTAA Gene GeneID:512780|ARL13A:XM_002699817:46_cdna Constitutive 0 NULL GeneID:512780 X GENE ARL13A NULL ADP-ribosylation factor-like 13A EMBV3_30788 GTATTCCCATCCCACTTAAGAAGAAACAACCCGTCGTATCGACACCATGCAAAAAGGACA Gene BVV0102_329558 - 1 EMBV3_27760 GK000015.2:51570392-51576357 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059490 TCONS_00061643 TCONS_00059493 2 XLOC_036434 XLOC_037108 Coding TCONS_00059493 XLOC_036434 Coding Coding - 15:51569707-51572890 - TSS44642 3083 1 TCONS_00059493_2 194 2 0.0317410433689503 2.72142945934525e-05 0 0 0 4.32197791580608e-06 0 5.16814384845547e-06 4.23561936460898e-05 0.000501717667573518 0.000657304051449439 7.13663352739747e-05 0.000124645440889914 0.000912287912695542 0.00294143215372026 0.00530701086412596 0 0 0 0 0 0 0 0.000317404077985236 1.27752137753657e-20 0 0 0 6.10008358964148e-05 1.50976164644522e-05 2.92475096781977e-05 XM_005200456.1 LOC101908409 PREDICTED: Bos taurus putative RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like protein 1-like (LOC101908409), partial mRNA. 1e-138 499 95.79 0.0999026921829387 NM_014188.2 SSU72 Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) (SSU72), mRNA. 8e-84 316 72.03 0.192993837171586 TCONS_00059493_2 sp|A6NK39|S72L1_HUMAN S72L1_HUMAN Putative RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like protein 1; 5e-97 284 72.16 0.994845360824742 1 coding CTTGGAAGAGCTGGACCCAGTCGGTCATCCCCTGGCCTTCAGAGTTCCCTCAGCCCCTGAAGTCCAGGCATCTGGCTGGAGTCCCAAGTGGCCGCCACCATGCCCTCGTATCCGCTCAGTGTGGCTGTGGTCTGCATGAGCAACATGAACAGGAGCATGGAGGCCCACCGCATCCTCAGGAGGAAAGGATTCCGAGTCAGGTCCTTCGGAGCTGGATCTCGAGTCAGGCTCCCAGGAAGGGCACGCAACCTCCCCGTGGTTTACGATTTCTCCACCACCTATGAGGAGATGCGCAAGGACCTTGTGCGCAAAGACCGACAACGCTATAATAGCAACGGCATCTTACACATCCTGGGAAGAAACGAGAGAATCAAGCCTCGCCCGGAAAGATTTCAAGAGTGCCGAGATCGCTTTGACGTCATCTTCACCTGTGCGGAGAGTGTCTACGACAGGGTGGTGGAGGAGCTGTGGGTCCGAGAGCAGGAGACCTTCCAGCCTGTGCACGTGATCAACGTGGACATGGCTGACAACGCGGAGGACGCCACTCTTGGGTCTTTCATCATCTGTGAGCTCTGCGAACGCCTCCAGCAGGCAGACAACCTGGAGGACTCTCTGGTCCAGGTGCTCCTGGCAGCCGAGAGCAAAACTGGCAAGAGCTTTCTGCACACGGTCTGCTTCTACTGAGGATCTTGTCTGCTTTCAGCTCCTCTTGGTACACTCCAGCCTGGGAAGGAAGTGGAGAAGGAAATCTTTTTCTGCCAAAATAACATGAACACCCTGGAGGCATCAAACCTTTCCATGGTGGGGGACGATGGTATGGATTCTTGACCTGGAAGGAACACTTCAGGTCTCACAGGGCTCTGCGAGGAAGTTAACCTAGAGGACTCCATTATCCACATCAAGAGACCAAGATTTACAATGGACCAGTGATGTCTTGAAGGACATTCAGCGAAGAAGAACAAACAAATCCAACACCATTTCCATTCCATCATTTGTTTTTACTTCATCATTTTAATACAGTTTCCTTTTGTCGTTTTGGTATTATGCATCAGTATAAATGAATTTTTCTTTTTAGTGAGATATGATTATATTTAATGTTTGAACTTTAAAAATCTAATTTTAGATTGTATATATTTTGGTAAATGCAAGTTTCATAGAAACTCAGGCATTGATTGCTAAAATGTGAGCACAATCTGTTCAATTCAATATTAATGAAATGAAATAATAGTTTTCTAGTTTATAGAAAATGGATCTCCTAATTTTTGGTAGGGGTTGGATCTTGCAAAAGGAACACCTTGGTTTCTTACTGTTCAAGCTGAATGAATTCCACAGAGTAAAGCACTCTTTCCTCAAGCGGATTTTCTTCATGCATAAAAGTTTCATTGATTATTGAACTCCTCTAAACGTGGATTCTATGTGTAGGGAAGTGAATCATCTTGGGTCTGACCAGCAATGACACCTAGGCATGTGTAACTTACAGCAGAAATTAAAGGAAGGGGGAGTTGGCCTGGTTGAATGAGGTATCTTGCTATGTCAGAAGATTGATGTGGACTTTATTTACAGAGCAAAGGTAGGATGGAGCAAGAGTGTACCTGGAGGCAAGGGATGAGCTAGTAGAGGATTTCCCGAGGAGTGTGGATTGAGCAGTAAAGTGGATGCTCTGGACAGGGGGACAAGCTGTGGGATCATAGGAAGATGGTGGAGTTGAAGGATGGAACATGCTGAAGAGGAGAGAGAGAGAGGGAAGAATTTAGAAGCAATGTCAGTTTTCTGTCTTTCCACACTGGTGACAGGGTGTACTTATCCACATGGGGCAGTGCTGGCAGTAGGGAGGTGAGGGTTTCTTTCTGGGTAGATTCAATGAGCTTCAAGGTCAGTCTTTCATCTGATGTTGAGGTAAGTAGGGCAGGAATGGGAAAGGGATCCGATAGTGTGTTGAGATGATCATCTCCAATGATGGGAACACAAAATGCAAATAGGGAATGTTGGGGACCCTTTATAAGAGAGAGAAATGATCTGTCCAGGAGATCTTACTTTTGTCAGAACATTCACTGGAAGGAATTAAGAAAATATTTTTGGTTGATTTCCTGTCTGTAGGGGTATGGAGGAGGCAAATATGATAAAGCATGTAAAAGTGCGGCTGGTGTTCCGAAGGAGTGACTCCAGTGAGGAAACTCAACATAGAAAGTGTCCATGGAAAAGTTAAAGGGAATGGGACTGGATGAAATGGATGGTGGGACATGGTTTGTCTAAGAGTCCTTAGAGCTGAAAAAATAACAAAGATTTGAGGGTTGACAGTTGAAGGTTGATGAGTGTCCTGCTTCAGGTTTAGATGTACTGCAGAGATCTGGATGGATCTTGGGAAGTTGCTGTCTTGGGGGAAGGTGTAGACAAAAGCAGTTGGACAAATGTAACAACACTGAATATCTTTGATATTGAATGAGTGATCTTTGTGCTGGTTGGGTTTGCTATGAATGGGACCTGTTCTAGTGACTTCACATAAAGAATTGTCAAGAGAATAGGAACCCTCTCATGCCAACATGACATGCCAACCCTTCCAATGTGGGGAACGATGGTGTGGAACTGGACCTGGAAGGAAGGACTCAGTGTTCACAGGGTTCTGCAAGGAGGTTAATCTCGAGGACTCTCTTCTGGATGGACAATCAAAGCTGATCACAGAGCCCAGGACAAGCAATGCATTGAAGGATATTCTGAGAAAAAGGAACAGTTTCTATTTTATTGATCTATATGGATACTGATTTCCTTTTGTCCTTTTGGCATGGTGTCGATACGACGGGTTGTTTTTTCTTAAGTGGGATGGGAATACATTGAATGGAAATTATATTGAATTGGAAATATTTTTGCTTTTAGAGTGTTTGTCTTTGATGAATGCCTACTTTATTAGAAACTCAGGGTAGATCATGTGTGGCTTTTTTAGGGGAAAATCCAAGCATGATTTGTTTAATCAAATAGCTTATTTATGAAAGAAAATTAGAAATCGCTGTAACCCTGGTTGCATTTATTACTAAAATCGAAGCCCTATCTGTTGAACTATGTAGCTCATTTAAATAAACAAAATGAAA TCONS_00059491 s 3' 5114 TCONS_00059491 s 3' 5114 EMBV3_43273 GTATCCAGCCACTAAAGCACTCTGGACTAATTGCTAAAGAGAAGCAATGTCGGGTGGGGC Gene BVV0102_092908 + 0 NULL GK000011.2:37219694-37290105 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31142 GTATATGCAGGAGAAGGAATGGCAATGTGGATTTCTTTTTTGGCCAGGGCTGAGGTGGGG Gene BVT0102_056461 + 0 NULL GK000004.2:87373280-87411297 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24447 CACGCATCACTGGATGTACAGTTTTGGTTCTGAGCAGGGAAAATACTTGGCTGGGTTTCC Gene GeneID:509535|NUDT18:XM_002689766:30_cdna Constitutive 1 NULL GeneID:509535 8 GENE NUDT18 NULL nudix (nucleoside diphosphate linked moiety X)-type motif 18 EMBV3_19887 GGTGGAAATGGACCCAACCTTTATTCTGCATGTGAGACCTCTGGACACCCCTCTGAGACT Gene GeneID:618944|LOC618944:NR_026724:17_cdna Constitutive 0 NULL GeneID:618944 23 GENE LOC618944 NULL similar to chromosome 6 open reading frame 52 EMBV3_37681 TTCACATCTGTTTCCTGTTCACATTCCCATCTTCCGGGGAACTTTGAGTCTCTGAGCCAC Gene BVT0102_021499 - 1 EMBV3_38306 GK000016.2:27886297-28009797 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38888 GAAAGAAGAACAAAGAGAGTCTTGGAATGAGGAGTGGTCTCATCCCGTGCCTTCCACCTG Gene BVV0102_069191 + 0 NULL GK000019.2:37553771-37570927 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31872 CGCGCCGCAATGTCTACTCCGGATCAAGCGTACGTGGACCGGCCCTGCCTGGAGCCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43192 CATCTGGGCCATCCTGTGACTCTGGTCAGTGTTTTTGAGAGGCTCAGTCCTAGTATTAGC Gene GeneID:338070|CHRNA1:NM_176664:196_cdna Constitutive 2 NULL GeneID:338070 2 GENE CHRNA1 NULL cholinergic receptor, nicotinic, alpha 1 (muscle) EMBV3_16212 AAAAGCCAGGGGTGGCTGTGCGAGCTGTTACGCTGGAAAGAAGACCCTTCTCCAGAAAAC Gene GeneID:516952|SATB1:NM_001102040:14_cdna UTR3_Alt 2 NULL GeneID:516952 1 GENE SATB1 MGC165895 SATB homeobox 1 EMBV3_14797 CTCGAGTCCTGCCTCTTGGACTGACGATAGATCCGGCGAGGTAGACGTTAAATACAAAGA Gene BVV0102_041642 + 0 NULL GK000023.2:44017426-44090793 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00137865 1 XLOC_084074 NonCoding TCONS_00137865 XLOC_084074 NonCoding NonCoding - 23:44079152-44081467 - TSS103155 2315 2 TCONS_00137865_2 100 0.181425485961123 1 0 0.000240964881606349 8.68114778720374e-05 0.000771499458094659 0.000215227078814541 0.000228197996725595 5.40807199375789e-05 4.28246569906837e-05 3.57693294393824e-05 0.000238579309653673 0 0 6.17827998078468e-06 1.11548654508894e-05 0 0.000144113060933158 0 0 0 0.00013009893088488 0.000114938664425216 0.000321276311548563 0 0 0 0.000942752290729424 0.00057824608164704 0.000341678593872887 0 0 0 XM_005202980.1 SLC16A14 PREDICTED: Bos taurus solute carrier family 16, member 14 (monocarboxylic acid transporter 14) (SLC16A14), transcript variant 4e-92 343 83.79 0.140820734341253 0 noncoding GTGCAATTAGTGATTTGTCTTTCTTATATTCACACTTTAAATTTATGTAAGGACATATTAGTCAGCATTTTGCCTTTTCTCTGTGGGATTTATGATCACATAGATAAGAGTTTGAAACTACGTGATCATGGGTAAGTTACTTGACCTCCTTTCCTTCTGTTTTCTCATCTGTGAAACCGACATCCCTATCTATGTCTGCCTCACCAGGTCTGTTAGAAGATTCTCTAGTCTAAGTGGCTCTTCCTCCCTCTGGCTGGCCTCAAAGCCCATTTTCTCACCACTAAACTGTAGGTTCCACCAGGACAGATACCCTATCAGCATGAGCCTCCCCTTAAGCAGGAGCTCAAGAAGTGCCTGCTGAATAAAGTTCTGTTGGAACATCATTCCCAAGTTTAATTTCTTCAAAAGATCATCACTGCTCACAGAATGAAGCTCAAATTCTTACAGGGTCAGAAAAGCTGCTTGTGAATCCGCTTGCGCTTATTAAAGACAGGTGATCAGTTCCGGTCGTCCGCCTCCCCGCTCCCAAGGCTACTGCTTATTAAAGACAGGTGATCAGTTCCGGTCGTCCTCCTCCCCGCTCCCAAGGCTGCTGGACCAGCTGGGCAGTGGAAGACGCAGTGCACAGTGAGAGACTCGATCACGCTGGAAGAAAAGGCTCTTTTTTCTAATTGGTCGGCCTTATCCACCTTGTGATGACATCGTTTTCTGTTTTGCACTGAAGCCCTCCGTGGACAAAGCAGCCGCTCTGAACGCCAGGCGCGAGGTCCACGGTTTCACCAGATGGGCTGAGCAGCCTTGCCTCCAAGTCTTTAAAGGAGCTGCTGTTTCTTTCTCCGGCCCCACACCATTTCCCTGGAGGATTCGGCGTAAATACCACTTCTTCCGCAAAGCCTCCCTGACCCCAGAAATAGAGTTCATGGTCCCTAACTCTCCACGCTTGCCTCTCACCTAGGGTCCAGTCATTTCCTCGCTCAGATATTTAGCGATTATTTATTAAGTGTCTGCTGGCAAGAGGCCAGTGCAGTGAGTCCATAGGAGGGACTCGAGTCCTGCCTCTTGGACTGACGATAGATCCGGCGAGGTAGGCGTTAAATACAAAGAGTTTGGTTTTAATTTTGAGGAGACCCCACCCTGCTGTGAAAGTGTGTATTAAACTGGAATGGCGACCGGACTTTTCAGACTGCGTGGTAACTGCCTGATTCTTGTGTATCCCTTTAGGAGAAGACAGGGTCTGTGAGCTCTAAATTTCACTTTTTCTCAGAGCTGTAGCCCCAGACCTGAGCGCAATATACTATATGCATTTAAGAGACTATAAATGCTGTCATGGTTGTGGTTCAGTGCCTAAGTCGGGTCTGACTCTTGGTGACCCCATGGACTGCAGCACACCAGGCTTCCCTGTTCTTCACTATCTCCCTAAGTTTGCTCAAACTCACGTCGGTCGAGTCAATGAGGCCATTCAACCATCTTGTCTTCTGCCGCCCCCGTCTCCTCCTGCCCTCAGTCTTTCCCAGCATCAGGGTCTTTTCCAACGAGTTGACTCTTCGCATCAGGTGGCCAAAGTACTGGAGCGTCAGCTTCAGCGTCAGTCCTTCCAATGAAGACTCAGGATTGATTTCCTTTAGAATTGACTGGCTTGATCTCCTTGCATACCAGTAGCCATATTGCTGTCTGGAAACTGCTTCTAGAAGGCTCTGCGATTGCTCACTTGTCACAACACAGGATTTGGAGTATGCCTGTCCACAATCTTCACGTGTCCCTGAATAGATAGAAATAAGGGGCACAGACCTTGAAAAAAGTTCCGTGAAGCTCAGCTCAGGGCATTTGCTTTCAGCGTGTCTCCCTGGCCCCTCCCCGGCCCCCTGGCACCCACAGAGCTGACCACATGTGCTTTGCCTGAAGCCCATTCATACCGGTGTGCCACCTCTCCCCAGCAGCTGCAGTTTTAGCCTTCCTTTCAATGTCTAGCATGAAAGCTTGTGTGCTCTGTAAAAGGCATTTCAGATTAATTGGGAAAAGTTAGTGGAAACTGAAATACAAGGTCCCCCACGGACATGTGAACCTCAAGCCCACTAGCGTTTAGGTTGTAGTTTTGTGACAAAACTGACTCGGGTTGCCTGCATTCTTTTGCGTGACTTGAATACCACAAAAAATACCATTTTGACATGAAAAGAATGCCAGAGCCTGAAGGCAATCTTGGTTTAGCCATTTCTAAGGTAATGGAGATGTGACGGCTTGGGAGTCATGAGCCGCAGGTGCTGGAGAAGAGCTGGGTTAGCACCTCCCCGTCAGCCTTCACCGCCCCCTCCCCTCCT TCONS_00135288 TCONS_00135289 TCONS_00135290 . 3' 57404 TCONS_00135288 TCONS_00135289 TCONS_00135290 . 3' 59718 EMBV3_35721 TACACCTTGTCCTACCAGTCCGAGGACGGCTGCAAACACTTCCTCATAGATGCCTCCTCA Gene GeneID:506242|SH2D4A:XM_002698743:5_cdna Constitutive 0 NULL GeneID:506242 27 GENE SH2D4A NULL SH2 domain containing 4A EMBV3_34249 TGTGCAAGAGTTTGTGGGGTCTTATGACTGCTTTTATTTAGCTAATTGTGGAGTAGACTC Gene BVT0101_008644 + 0 NULL GK000001.2:128036421-128050717 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37151 ATCCCCAGGCGTTTGGGAGAAGGGCCTGGCTGACTGCCTGGGTCTCTATTTATATATTTA Gene GeneID:535312|PIAS3:NM_001102185:80_cdna Constitutive 0 NULL GeneID:535312 3 GENE PIAS3 MGC165870 protein inhibitor of activated STAT, 3 EMBV3_16963 AGATGACTCTAATAAAATGAAACGTGACTAAAACACAAAAATCTCGAGAGAACTGTTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34801 CAGCCTGGGTGTGTTGGGTGAGCTGCTTCAGGTTTGCAGAAACAAGGCATTAGGAAATGT Gene GeneID:618400|GPT2:XM_002694771:557_cdna Constitutive 1 NULL GeneID:618400 18 GENE GPT2 NULL glutamic pyruvate transaminase (alanine aminotransferase) 2 EMBV3_30987 CTGTGCTTTTAGAAACTTGCCAACAAACGATTATTCTGCCATCTTTGCTGAGAGTGAACT Variant GeneID:281900|LHCGR:NM_174381:21_cdna 882^962 1 EMBV3_35143 GeneID:281900 11 GENE LHCGR NULL luteinizing hormone/choriogonadotropin receptor EMBV3_10551 CATGCTAACTGAGCTGTGTGAGGCCATGAAGACAAATACCCATGTCCGGAGCTTCAGCCT Gene GeneID:505645|TMOD4:NM_001075215:49_cdna Constitutive 0 NULL GeneID:505645 3 GENE TMOD4 MGC143437 tropomodulin 4 (muscle) EMBV3_16241 CCATATATCAACATGAATCCACCACAGGAGAGGGTGGGATGATTTGGGAGAATGGTATTG Gene BVV0102_191625 + 0 NULL GK000009.2:7920030-8280377 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04606 CCGGATCCAGCAAAATCCGCTCCTGCTCCAAAAAAAGGTTCTAAAAAGGCTGTCACGAAA Gene GeneID:615091|LOC615091:XM_002686059:292_cdna Constitutive 0 NULL GeneID:615091 3 GENE LOC615091 NULL similar to histone cluster 1, H2bd EMBV3_00044 GGAGTTGAATTCTTTCCTGAAGCTCTTACTATTGGTAGGATGAAAGCGTGGACCTGGCAG Gene BVT0102_429163 + 0 NULL GK000009.2:85218732-85627753 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236143 1 XLOC_144385 NonCoding TCONS_00236143 XLOC_144385 NonCoding NonCoding - 9:85625719-85626863 - TSS176825 1009 2 TCONS_00236143_1 44 2 0.118985126859143 8.09059065271653e-05 0.000248969687836268 0.000366859170287752 0.000288052388850153 0.000127221642202238 0 0.000156051777180768 7.03435778420689e-05 5.47383069211221e-05 8.1555826359598e-06 2.2687648963937e-06 1.41751811479422e-05 4.54988657912566e-05 0.000456879730502003 0.000111836162337865 5.23520300617452e-05 0 2.48670844201199e-05 0.000305599963230454 0.000370618486679545 0.000309890805714377 0 0 0.000332302709705982 0.000775934161370411 0.00123592499762876 0.00101039844203007 0 0.000144339292252873 0 0 noncoding 0 0 0 0 -0.214847977727101 0.275907627520156 0.0237412643070351 0.735080561041003 AGAGTACTACATTTCCCGAAATTCCTGAGGCTCAGCCGCCACTGGTTTGTTGACTGTTCTTGACTGCCTGTCATTTCAACCAATACACTGATGAGAATTTCCCTGCACCGGGCGGGAGGCGACCAATCATAAGGAAGAGGGCGGGCACTTCTGATTTGGGCTCAGAAAACCCTCTGTAACTCAGAAGCGTCAGGGGCTGGGAGTTGCTAGCTTTGGAAGAGTGTGCTTCTTCCCACTCCCACCTCACGAATTAGAATTCGTCTTTATGGGTTTCCAACCTTTTCTTTACGTTTTTCCTAGTTTCCACTCCTTCCTAATCAGTACCTCTGCTTCCCATCCACCTTTCCGTGTTAAACTCACTCTCCGGAAAAGAGTGAAGAAGCTACTGGAGATTGCTTAGTGGACAACAGGATTACAGGACGGACCGAAGATTTCTGAAATGAGTGCCCGCGCTGTTTACTTCCCTCCCTCATCTCCACCACCTTAGCGTGCGGACTGAATCCAGGGCTGGTGTGTCACTGGTTGGGGCAGACACCCAGCCCTGGAGCCGGTTCCCTTTGGCAGCCTATCCCATTCTAGCAGCTACCTGCCAGGTCCACGCTTTCATCCTACCAATAGTAAGAGCTTCAGGAAAGAATTCAACTCCTTTCCTAGTACCTTTCTAAGTCTGTCATACTCTTGCCACAGAAATAACCGTTGTCTAGACGCTCTTTTTCCAAAATTCAAATCCAAATCAATCCAAAACAAAGACCATCAATAAAGCAGCAACAATCATTGTGCAGCCAGCAGCCGGGAGTGTGTGCCTCGTTAAAGGGTGAGAATATAAACCCTCGCTTTAATGACCAATTTTGAAATAAAGGTTTCCTGCTGCTTGGTACTCATCAACATTTTTACTACCCCAGCTGCAGGAGAAGCAGCTGCATCCACTGGCAGGGCGATTGAGATGGGAGAAATTTAGCCACGGTCTGGGATTTTCGCAGAGGATAATTTGAGCCCCAGCTCCACTCCG TCONS_00236144 TCONS_00236145 s 5' 255 TCONS_00236144 TCONS_00236145 s 5' 1398 EMBV3_22860 GTGAAGAATTGTTTCCGGATGACTGACCAGGAGGCTATTCAAGATCTCTGGCAGTGGAGG Gene GeneID:614028|NPM1:NM_001035441:163_cdna Constitutive 0 NULL GeneID:614028 20 GENE NPM1 MGC127254 nucleophosmin (nucleolar phosphoprotein B23, numatrin) EMBV3_43747 TCTGGCAATTAGTATGACAGCCTCCGAGCAGACAGATGAGAGGACAGAGTGAGAACTGTC Gene BVV0102_190468 + 0 NULL GK000016.2:59456251-59478749 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12004 CACCTAATCAAAATCTATCAGAAGCAAAATCTTCCTGATAAATCTATAGCAAGTCTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21962 TCGGGACCCCGTGCGCAACCTCCGCCTCCGGTGGACACCGCCCAGAGGAAGAAGAAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02183 CATCACATGGCATGTTATGTCATTGTTTTCAGGTACTGGGTTCTTACTTGTGTATCGTAA Gene BVV0102_354684 + 0 NULL GK000030.2:117604203-117741426 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245537 TCONS_00245530 TCONS_00245538 TCONS_00245542 TCONS_00245535 TCONS_00245531 TCONS_00245543 TCONS_00245541 TCONS_00245539 TCONS_00245540 1 XLOC_150750 Coding TCONS_00245531 XLOC_150750 Coding Coding LOC537655 X:116871760-117606342 j TSS184291 6373 1 TCONS_00245531_7 1289 29 0.991363784252519 0.00178884364320301 0.00127259646462506 0.00116999686493307 0.00105418915985774 0.0017641776169767 0.000348255373120744 0.0010674970658718 0.00137971955585009 0.00130531116095064 0.00022756286859875 1.02488596972241e-15 1.48914845572172e-37 0.000113649996993856 0.00020290026743504 0.000185479732343357 4.78482207856367e-100 3.30200442378371e-47 6.8281124933603e-174 0.00151938966925586 0.00175728131766303 0.000374468927154775 1.16373543002366e-40 6.59044676694803e-20 7.52610703713021e-112 0.00170542293290039 0.00133080299563545 0.00116847803993102 1.57429487955555e-15 2.2957814790188e-07 2.90231561506668e-05 XM_005228315.1 DMD PREDICTED: Bos taurus dystrophin (DMD), transcript variant X1, 0.0 9663 100.00 0.840577436058371 NM_004021.2 DMD Homo sapiens dystrophin (DMD), transcript variant Dp140b, mRNA. 0.0 8109 87.68 0.982582771065432 TCONS_00245531_7 sp|P11532|DMD_HUMAN DMD_HUMAN Dystrophin; 0.0 2525 97.42 0.960434445306439 5 coding 1 1 1 0 -0.0669346801841068 0.667039527870834 -0.0253962077223402 0.686551179789645 AGTCAATTCCCCTTCCTCTTGGAAGCAAGCCTACCAGCCACCATGTTCTGCCCAACCTGCAGTCCACTGCGCTCACTGGGGTGTCACGCCAGGGCCTTGCTGCAGACATCTCCTAGTCAGACGGTTGCTCTGGTGACACAACCTGTGGTTGCCAAGGAAACCGCTGTCTCCAAACTAGAAATGCCATCTTCCTTGCTGTTGGAGGTCCCTGCACTGGCAGATTTCAACCGGGCTTGGACAGAACTTACCGACTGGCTGTCTCTGCTTGATCGAGTTCTGAAAGCACAGAGGGTGATGGTGGGTGATCTTGAAGACATCAACGAGATGATCATCAAGCAGAAGGCAACACTGCAGGACTTGGAGCAGAGGCGCCCCCAGTTGGAAGAACTCATTACTGCTGCCCAGAATTTGAAAAACAAGACCAGCAATCAAGAGGCCAGGACCATCATTACTGATCGAATTGAAAGAATTCAGAGTCAGTGGGATGAAGTACAGGAACACCTTCAGAACCGGAGGCAGCAGTTAAATGAAATGTTAAAGGATTCAACACAATGGCTGGAAGCTAAGGAAGAAGCTGAGCAGGTGGTGGGGCAGGCCAGAGCCAAGCTTGAGACATGGAAGGAGGGTCCCTACACAATGGATGCAATCCAAAGGAAGATCACAGAAACCAAGCAGTTGGCCAAAGACCTCCGCCAGTGGCAGATAAATGTAGATGTGGCAAATGACTTGGCACTGAAACTTCTCCGGGATTATTCTGCAGATGATACCCGAAAGGTACACATGATAACAGAGAACATCAATGCCTCTTGGGCAAGCATTCATAAAAGAGTGAGTGAGCGAGAGACTGCTCTGGAAGAAACTCATAGATTACTGCAACAGTTCCCCCTGGACTTGGAGAAGTTTCTTGCCTGGCTTACAGAAGCTGAAACAACTGCCAACGTCCTGCAGGATGCCACCCATAAGGAAAGGCTTCTAGAAGACTCCAAGGGAGTAAGAGAGCTGATGAAACAATGGCAGGACCTCCAAGGAGAAATTGAAGCTCACACAGATATCTATCACAACCTAGATGAAAATGGCCAAAAAATCCTGAGATCCCTGGAAGGTTCTGATGACGCGGTCCTATTACAAAGACGTTTGGATAATATGAATTTCAAGTGGAGTGAGCTGCGGAAAAAGTCTCTCAATATCAGGTCCCATTTGGAAGCCAGTTCTGACCAGTGGAAGCGTCTGCACCTTTCTCTTCAGGAACTTCTGGTGTGGCTACAGCTGAAAGACGATGAGTTGAGCCGTCAGGCACCTATTGGAGGCGATTTCCCAGCAGTTCAGAAGCAGAATGATATACACAGGGCCTTCAAGAGGGAACTGAAAACGAAAGAACCTGTAATCATGAGTACTCTTGAGACTGTACGAATATTTCTGACAGAGCAGCCTTTGGAAGGACTAGAGAAACTCTACCAGGAGCCCAGAGAGCTGCCGCCTGAGGAGAAAGCCCAGAATGTCACACGACTCCTACGAAAGCAGGCTGAGGAGGTCAACACAGAGTGGGAAAAATTGAACCTACACTCGGCTGACTGGCAGAGAAAAATAGACGAGGCCCTCGAAAGACTCCAAGAACTGCAGGAGGCCACGGACGAGCTGGACCTCAAACTGCGCCAAGCTGAGGTGATCAAGGGATCATGGCAGCCCGTGGGCGATCTTCTCATTGACTCCCTCCAGGATCACCTCGAGAAAGTCAAGGCACTTCGAGGAGAAATTGCACCTCTCAAAGAGAATGTAAGCCACGTCAGTGACCTTGCTCGCCAACTCACCACGTTGGGCATTCAGCTTTCACCATATAATCTCAGCACTCTGGAAGACCTGAACACCAGATGGAAGCTTCTGCAGGTGGCTGTTGAGGACCGCATCAGGCAGCTGCATGAAGCCCACAGGGACTTTGGCCCAGCGTCCCAGCACTTCCTTTCCACTTCTGTCCAGGGTCCCTGGGAGAGAGCCATCTCACCAAACAAAGTGCCCTACTATATCAACCACGAGACCCAAACAACTTGCTGGGACCATCCTAAAATGACAGAGCTCTACCAGTCTTTAGCTGACCTGAATAATGTCAGGTTCTCGGCTTATAGGACTGCCATGAAACTCCGAAGACTGCAGAAGGCCCTTTGCTTGGATCTTTTGAGCCTGTCAGCCGCATGTGATGCCTTGGACCAGCACAACCTCAAGCAAAACGACCAGCCCATGGACATCCTGCAGATCATTAACTGTTTGACCACTATTTATGACCGCCTGGAGCAAGAGCACAACAATCTGGTCAACGTCCCTCTCTGCGTGGATATGTGTCTCAATTGGCTGCTGAATGTTTATGATACGGGACGAACAGGGAGGATCCGGGTCCTGTCTTTTAAAACTGGCATCATTTCTCTGTGTAAAGCGCATTTGGAAGACAAGTACAGATACCTTTTCAAGCAAGTGGCCAGTTCAACAGGATTTTGTGACCAGCGCAGACTGGGCCTCCTTCTACATGACTCTATCCAAATCCCAAGACAGTTGGGTGAAGTTGCATCCTTTGGGGGCAGTAACATTGAGCCAAGTGTCAGGAGCTGCTTCCAATTCGCTAATAATAAGCCTGAGATCGAAGCAGCTCTCTTCCTCGATTGGATGAGACTAGAACCCCAGTCCATGGTGTGGCTGCCCGTCCTGCACAGGGTGGCTGCCGCGGAGACCGCCAAGCATCAGGCCAAGTGTAACATCTGCAAGGAGTGTCCAATCATCGGCTTCAGGTACAGAAGTCTAAAGCACTTTAATTATGACATCTGCCAAAGCTGCTTTTTCTCTGGCCGCGTTGCAAAAGGCCATAAAATGCACTATCCCATGGTGGAATATTGTACTCCGACTACATCGGGAGAAGATGTTCGAGACTTTGCCAAGGTACTAAAAAACAAATTTCGCACCAAAAGGTATTTTGCGAAGCATCCCCGAATGGGCTACCTGCCAGTGCAGACGGTCTTAGAGGGGGACAACATGGAAACTCCTGTTACTCTGATCAACTTCTGGCCGGTAGACTCTGCGCCTGCCTCGTCCCCTCAGCTTTCACACGATGATACTCATTCACGCATTGAACATTATGCTAGCAGGCTAGCAGAAATGGAAAACAGCAGTGGATCTTATCTAAATGATAGCATCTCTCCTAATGAGAGCATAGATGATGAACATTTGTTAATCCAGCATTACTGCCAAAGTTTGAACCAGGACTCCCCCCTGAGCCAGCCTCGTAGTCCTGCCCAGATCTTGATTTCCTTAGAGAGTGAGGAAAGAGGGGAGCTAGAGAGAATCCTAGCAGATCTTGAGGAAGAAAACAGGAATCTGCAGGCTGAATATGATCGTCTCAAGGAGCAGCATGAACATAAAGGCCTGTCCCCACTGCCGTCCCCTCCTGAGATGATGCCCACCTCGCCACAGAGTCCCCGGGATGCTGAGCTCATTGCTGAGGCCAAGCTACTGCGTCAACACAAAGGCCGCCTGGAAGCCAGGATGCAAATCCTGGAAGACCACAATAAACAGCTGGAGTCCCAGTTACACAGGCTCAGGCAGCTGCTGGAGCAACCCCAGGCTGAGGCCAAGGTGAATGGCACAACGGTGTCCTCTCCTTCTACCTCTCTTCAGAGGTCAGACAGCAGCCAGCCTATGCTGCTCCGGGTGGTTGGCAGTCAAACTTCAGAATCCATGGGCGAGGAAGACCTTCTCAGTCCTCCCCAGGACTCAAGCACAGGGTTAGAGGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTCCAGAGGACACAATGTAGGAAGCCTTTTCCACTTGGCAGATGATTTGGGCAGAGCGATGGAGTCCTTAGTTTCAGTTATGACAGATGAAGAAGGGGCAGAATAAATGTTTTACAACTCCTGATTCCCGCATGGTTTTTATAATATTCATACAACCAAGAGGATTAGACAGTAAGAGTTTACAAGAAAAAAAATCTATATTTTTGTGAAGGGTAGTGGTACTATACTGTAGATTTCAGTAGTTTCTAAGTCTGTTATTGTTTTGTTAACAATGGCAGGTTTTACACGTCTATGCAATTGTACAAAAAGTTATAAGAAAACTACATGTAAAATCTTGATAGCTAAATAACTTGCCATTTCTTTATATGGAACGCATTTTGGGTTGTTTAAAACTTTATAACAGTTATAAAGAAAGATTGTAAACTAATGTGTGCTTTATAAAAAAAAAGTTGTTTATAAAAACCCCTAAAAACAAACACATACCTACACACACACACACACACACACACACACACACACACACACAAAAACACAAACTGAGGCAGCGCATTGTTTTGCATCCTTTTAGCGTGGTATCCATATGAAATTCATGGATTTTTTTTCTTTTCTTGCATATTAAAGATAGGACTTCCTCTAAGACCACCAAATGACTACTTCACATAGCTCTGTTAGGAATTGTTGACTGAGTGGGACTGGCCATGGGTTTTCGTTTTACACATCTATATGTCTATCGGTATGTAAGCACTGTAGGTATACAGGTAAATATAAATTTCAAGAGACATTTAAAATTTCTCGTTCAAATGTTCTTGCCACTTCCTAATGGAAAGAAATTGCTTCTCATCACCCAGGCTCACCTGCTTGGTCTAGAATGAATCCTCCCTGGAGCCTGAAGCCAGAAGGAAACTACCACACTAAAACATGGTCTAGGGTTCCAGATGTTTCTCATTTTGAACTTTCCACTGACAACTAGAGTATTGAATTTTTTAAGGGACATATGAATGAATACACAGGACTTATGTCAGAGTAATCCACTGGTTGATTCATTCAGCTTCCTGCTGCTGACAATGCCACGGTTTAGAGTTAGTGATGCTTTGATGAAAGAGCATCTGAAGGCATTTTTAACTCCCAGGCAGGAGGGCTGTAGATTCCCTCAGAGAGAGCAGACCACTCTTCATGTAAAGGATTGGATAACTGTTCATAACCTTACAGAGAGAGCTTTATAATTACAGCGCAGTTCTTTTCTCACAGTCAAACAGTAGTGGGTGTCTTGGTTTTCCAGTTTTGTAAGTTTTTTTCCCCATTTCAATGAGTTTGTAAATGCCACAAGACATAATTTAAAATAACCCTTGTGAAAATGTGGAAGACAGTTGCCCCATCACATTATGACACTTAAAAATCCACCCAGACGCCCAGGACCCTGCGTCCCTGTTCGGCATTTTTCTCTATAAGTAACTCCAGGCAGGTTTGTTGAGTGGGAATGTAAATGGATTCAAACGTTCCAAGAGGTACTCCAAACCCCTTTTTGGTGGCTTAGGCAGGTTAAATATATATAAGTAAACAGAAATCATTCGAAAGGAGGAGTACAGGCAAGAGGACTAACTGGTAGGAAAAAAGCTTTACTCTTTCATTTTGTCTTATTAGTCTTTCACTCTTCTTTATCATCCATTCAATAGAAATCACCCTGTGATCTATCATTTTGCAAATCTGTTACCTCTTACATCAAGTGTAATTAACTTTTGGAGAGTGGGTTTTGTTCCTTATTTTACTAATGATAATTAACATCCAACATGGCTTCTCATGCTATTTCTACCTCACTTTGGTTTTGGGGTGTTCCTAATAATTGTGCACACCTGATTTCACAGCTTCACCACCTGTCCATTGTGTGAACATTTTCCTCCATTTTCTTTTTCCTTTATAATTTCCAAAAGAAAACCCAAAGCTCTAAGGTAACAAATGACATGAAGATTTGATTTTAGTCTTGGCTTTTTTTTTTTTTTTTCCTTTATGTGACGCTGGACTTTTTCTTTACCTGAGATTTTGGGCTTTTTCTTTTCTTTTTTTTTTTTAACCGTGATTTAAAACAAGGAGTTACTTTACTTCCTACTAAGAAGTTTAAGTTTCATTCTAAAATCAGAGGTAAATAGAATGCTTGATTTTGTTTTAATCTTTTTTGTTTTATTTTATCTTTTAGACATTAGTTCTGGAGTGAGTCTCAAAATATTTGAATAAAAACTGAGAGCTTTATTGCTACATTTTATGCATTAATTTGGACATTATTTCATGTTCCTTATAACCACCAAGTAGTAAACTGTAAGTCATAATGTAACTGAAACATAAACATCACATGGCATGTTATGTCATTGTTTTCAGGTACTGGGTTCTTACTTGTGTATCGTAATATATTGTGTTTTAACACCAACACTGTAACATTTACTAATTATTTTTTTAAAACTTCAGTTTTACTGCATTTTCACAACATATCAGACTTCACCAAATATATGCCTTACTATTGTATTATATTACTGCTTTACTGTGTATTCTCAATAAAGCACGCAGTTATGTTACAA EMBV3_30926 CCAAGAAATGCCAACGAGGAACAGGATCCACCAGAAACAATCGGCTAAAGTTGTCATCCC Gene GeneID:100126271|SNAPC3:NM_001110190:27_cdna Constitutive 0 NULL GeneID:100126271 8 GENE SNAPC3 NULL small nuclear RNA activating complex, polypeptide 3 EMBV3_20979 GAATTCGGGGAAGGGACTGTGATTGAGTTCTATGATGATGGGGGTGCGGGAAACGTGGAA Gene BVT0102_276669 + 0 NULL GK000017.2:12831330-12906375 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076673 TCONS_00076679 TCONS_00076680 TCONS_00076678 TCONS_00076683 TCONS_00076674 TCONS_00076682 TCONS_00076672 TCONS_00076675 TCONS_00076676 TCONS_00076681 TCONS_00076677 1 XLOC_046891 Coding TCONS_00076676 XLOC_046891 Coding Coding MMAA 17:12818446-12847237 j TSS57520 1165 1 TCONS_00076676_2 202 4 0.959673497742272 0.0280476729012799 0.0167753204407572 0.0257011180989706 0.0205073343222302 0.0158049946210473 0.00902360555419366 0.0156018923936547 0.018416774619508 0 0.00459248711251275 7.33917080748161e-39 0.000643584653946138 0.0020082950550293 0.00379004320743503 0.00667426470580551 0.00311534075509151 2.42226930851024e-32 3.36451729489567e-168 0.0234501140743376 0.0265872546497762 0.00875316069739965 0.000872632218689189 0.000912635676445411 3.39786571560686e-46 0.0328165800006501 0.0341961135256692 0.0242629996650577 0.000229816357951074 0.0013691504005805 1.3105437647945e-69 XM_005217497.1 MMAA PREDICTED: Bos taurus methylmalonic aciduria (cobalamin deficiency) cblA type (MMAA), transcript variant X1, mRNA. 0.0 1452 100.00 0.690128755364807 NM_172250.2 MMAA Homo sapiens methylmalonic aciduria (cobalamin deficiency) cblA type (MMAA), mRNA. 0.0 800 88.41 0.539055793991416 TCONS_00076676_2 sp|Q8IVH4|MMAA_HUMAN MMAA_HUMAN Methylmalonic aciduria type A protein, mitochondrial; 5e-114 336 85.71 0.930693069306931 1 coding 1 1 1 1 -0.168103893942044 0.162515580792923 -0.00832902646200843 0.895978429638066 GGCGGGGGTTGCGCGCCGCGTCCGGATTGGGGCCAGGCTCGTGCCTCAGGCCGCCGGGGGCTCAGCTCTGCGTCTGGGGCGCCCCCTGGGGAATTCGGGGAAGGGACTGTGATTGAGTTCTATGATGATGGGGGTGCGGGAAACGTGGAACGAGTAAGCGTCGGCAAAATGGATTCACAGGGAAGGGAGTCAAAAGTCACATTGAACCAAAAACCATCCATCGTTTTCTTCAATTACAAGCACAATGAATATTCCCATGCTGCTCCAGCGTCCTCACCAGCACTTCCTAAAAGGCCTTGTGAGAACACCTTTCCGATGTTACCGCTTCATCTTTCACCCAAGTCCTCACCTCGGATCTGGAGTCCCGTGTGCTCAGCTGCTCAGTTCTCCTGGACTTCATTGTGCAAAGTGGATGCTGCCATCGAATGGTTTAACAAGAAAATTATGTCTGCAAACAACCTTAGAGGAACATACAGAAGGGCTTTCTGATAAAGAACAAAGACTTGTGGATAAGCTCTATGCTGGTTTAATCCAAGGCCAGAGGGCCTGTTTGGCGGAGGCCATAACTCTTGTAGAATCAACACACAGCAGGAAAAAGGAGTTAGCCCAGGTGCTTCTTCAGAAAGTATTAGCCCACCACAGAGAACAAGAAAACTTAAATAAAGGAAAACCACTAGCATTTCGAGTGGGATTGTCTGGGCCTCCTGGTGCTGGAAAATCAACCTTTATAGAATATTTTGGAAAAATGCTCACTGAGAGAGGACACAAATTATCTGTGCTGGCTGTGGACCCTTCTTCTTGTACTAGTGGTGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCACTGAAATGTGGGATAAAATGAAAGAATTCCAGGAGGTGATGCTTGTCAGTGGGGAGCTGGCTGCCAAGCGACAGAAGCAGCAGAAGGTCTGGATGTGGAACCTCATTCAGGAGAACGTCATAGAGCATTTCAGGACCCACCCCGCAGTCCGGGAACAGATTCCTCTTCTGGAAAAGAGGGTTCTCAGTGGGGCCCTGTCCCCAGGACTAGCAGCAGACCTGTTGTTGAAAGCTTTTAAAAGCAGACACGAATGAAGTGCAGCCTACACAGTGATTTTAATATATCTTTTAATAAAGTATTTTAATATTAAAAGTCA EMBV3_21330 CTGGAAGTGGGTGGTGCTGCTGGTTGCTTTGAGTGAGGGTCCCAAACAGGAGTTTCTAAA Gene GeneID:615386|HPS4:NM_001076368:89_cdna Constitutive 0 NULL GeneID:615386 17 GENE HPS4 NULL Hermansky-Pudlak syndrome 4 EMBV3_17454 CATAGCGGAAATGAGAAAGCAGAGGGAATTCTACCACAAGTTAGGCCTGGAAGTGCCTGG Gene GeneID:100336761|LOC100336761:XM_002688443:13_cdna Constitutive 0 NULL GeneID:100336761 6 GENE LOC100336761 NULL polycomb group ring finger 3-like EMBV3_37584 CAGGGCCCAGCTCAGAGGCCAGCTCCTCCCAATCTTGATGTCTCTTTGAAATGGAGTTGT Gene GeneID:504908|DOLPP1:XM_002691639:342_cdna Constitutive 1 NULL GeneID:504908 11 GENE DOLPP1 NULL dolichyl pyrophosphate phosphatase 1 EMBV3_00022 TGTACACGAGGCTCCCAGTGTTCCGGGACTGGATTAAAGCGCAGATCGGGGTATAGATAC Gene GeneID:767617|ST14:NM_001076538:176_cdna Constitutive 1 NULL GeneID:767617 29 GENE ST14 NULL suppression of tumorigenicity 14 (colon carcinoma) EMBV3_39412 AGACCCAGAACTGCTTTTACTCAAAACCAGATCTGGTTCCAAAATCGGCGTGCAAAGCTG Variant GeneID:781811|HESX1:XM_002697000:384_cdna 358^459 1 EMBV3_32251 GeneID:781811 22 GENE HESX1 NULL HESX homeobox 1 EMBV3_43711 TTAGATGGAGTTTACCACCCGCTTTGGGCTGCATCCCCAAGCAACCCGACTCCGGGAAGA Gene BVV0101_074719 - 1 EMBV3_26932 GK000018.2:58220106-58234380 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43444 CGCATCTGGATAGCAACACTGAGCCAGGACTTACATTGGGAGGCTATTTCTGCCCCCAGT Gene GeneID:511829|GTF2H2:NM_001038530:75_cdna Constitutive 0 NULL GeneID:511829 20 GENE GTF2H2 MGC133741 general transcription factor IIH, polypeptide 2, 44kDa EMBV3_15200 TTCATCATAGCATACTTAACCCCAGTGACAGCGACATGAGAAGTGGAAAACGTCGTGGTC Gene GeneID:509259|GTF2F2:NM_001038064:70_cdna UTR3_Alt 3 NULL GeneID:509259 12 GENE GTF2F2 MGC133695 general transcription factor IIF, polypeptide 2, 30kDa EMBV3_05296 CCTGCAAACTCGTGAGAGACAAAATTACAGGTCTCATATGCCCGTCCGAGCTCTGCCTCA Variant GeneID:535408|ELAVL4:NM_001081606:91_cdna 493^596 3 EMBV3_18589 GeneID:535408 3 GENE ELAVL4 MGC140771 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) EMBV3_04426 GAGGAAAATGATCCAGACTATGACCCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAG Gene GeneID:790872|NAP1L1:NM_001099215:29_cdna Constitutive 0 NULL GeneID:790872 5 GENE NAP1L1 MGC165985 nucleosome assembly protein 1-like 1 EMBV3_24188 GACGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAATGTGTAGCATTATTTGGTGCTTT Gene BVV0102_133534 + 0 NULL GK000002.2:85806606-85835324 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105642 TCONS_00105643 TCONS_00105638 TCONS_00105645 TCONS_00105640 TCONS_00105639 TCONS_00105644 TCONS_00105641 TCONS_00105646 1 XLOC_062621 Coding TCONS_00105640 XLOC_062621 Coding Coding PGAP1 2:85827715-85909677 j TSS77904 10096 1 TCONS_00105640_3 682 0.0282290015847861 26 0.877136686960872 9.0791671075106e-06 8.81283743467493e-09 0.000254937558735691 4.73180996711873e-19 0.000293000619682076 4.00553044441175e-09 0.000282728222545717 0.000424639938309482 0.000180571954442298 2.00414487767956e-20 1.10927141357503e-11 1.54635730583127e-05 2.9131232592856e-06 5.2492700865151e-09 3.5968207585432e-16 0.000759050790734526 3.89292048547725e-20 0.000553596832051495 1.32764189223267e-05 2.82274682913901e-06 8.72340189897523e-10 0.000571768276560121 0.000462510892802422 3.35871751096714e-09 0.000493895781289172 2.78018868321593e-07 1.50226993187161e-06 4.16099513483879e-21 5.02919286207374e-17 7.7534091512804e-05 NM_001205550.1 PGAP1 Bos taurus post-GPI attachment to proteins 1 (PGAP1), mRNA. 0.0 3258 100.00 0.178783676703645 NM_024989.3 PGAP1 Homo sapiens post-GPI attachment to proteins 1 (PGAP1), mRNA. 0.0 3074 76.05 0.426802694136292 TCONS_00105640_3 sp|Q3UUQ7|PGAP1_MOUSE PGAP1_MOUSE GPI inositol-deacylase; 0.0 1181 79.14 0.998533724340176 1 coding 1 1 0 0 0.227724280877024 0.532861839335913 -0.0605710476223671 0.294151165352855 TGAGGTTCTGCCCTCCCTTCGCTGGCCGCTCCGAGGCTCGGGCCCCTCCAGCCTTACCCTTCGAAAATTGAACTTCCAAAGAAACTGGCAAAACGCTATCCTGCTTATGAATTGTATCTTTATGGAGAAGGGTCCTATGCTGAAGAACACAAAGTTCTCCCTTTAACGGGTATTCCTGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATTGGCTCTATTGCACTTAGAAAAGCCGAAGACATTGACTTCAAATACCACTTTGACTTCTTTAGCGTGAATTTCAATGAAGAACTGGTGGCACTGTATGGTGGAAGTCTTCAGAAACAGACCAAGTTTGTGCATGAATGCATTAAAACAATTCTCAAGCTCTATAAGGGTCAAGAATTTGCTCCCAAAAGTGTGGCAATAGTCGGTCATTCTATGGGTGGCCTTGTGGCAAGAGCATTGCTTACACTGAAAAATTTTAAACAAGATCTGATCAATCTTCTTGTTACACAAGCCACACCTCATGTTGCTCCTGTGATGCCATTAGATCGTTTCATTACAGATTTTTATATGACTGTAAACAACTATTGGATTTTAAATGCTAGACAGATAAATTTAACCACACTTTCTGTAGCTGGAGGATTCCGGGATTACCAAGTTCGTTCAGGACTGACTTTTCTGCCAAAATTAAGCCATCATACCAGTGCCTTATCTGTTGTGAGTTCAGCAGTGCCTAAGACATGGGTCTCAACAGACCACCTCTCCATTGTATGGTGTAAACAATTGCAATTGACTACAGTTCGAGCATTCTTTGATCTTATTGATGCTGATACTAAACAAATAACTCAAAATCCCAAGAAGAAATTGTCGGTTTTGAATCACCATTTTATAAGACACCCAGCAAAACACTTTGAGGAAAATCCATCAATAATTTCTGACTTAACAGGAACATCTATGTGGGTTCCAGTAAAAGTGTCCAAATGGACATATGTGGCTTACAATGAATCTGATAAGATATATTTTACATTTCCCCTTGCAAATCATAGAAAAATCTACACTCATGTCTATTGTCAGAGCACCATGCTGGATACAAATAGTTGGATTTTTGGCTGCATAAACAGCACTTCTATGTGCCGGCAAGGGGTTGATTTATCATGGAAAGCTGAACTGCTGCCAACAATTAAGTCTCTGACGTTAAGACTTCAAGACTATCCATCTTTGTCTCATCTTGTTGTTTATGTACCATCTATTCATGGAAGTAAGTTTGTTGTAGATTGTGAATTCTTTAAAAAAGAGACAAGATCCATACAGCTTCCTGTAACTCATCTTTTTTCCTTTGGATTGTCTTCAAGGAAAGTGATATTAAATACAAGTGGTCTGTTCTATAATATAGAGCTTCTGAACTTTGGACAGATATACCAAGCGTTTAAAATCAACGTGGTAAGCAAGTGCTCAGGAGTCAAAGAAGAAATTACTAGTATCTATAAACTTCATATTCCCTGGTCTTATGAAGATTCACTAACCATTGCACAGGTTCCATCTTCCACTGAAATTTCTGTGAAACTCCATATTGCTCAACCGGATAATGACAGCCATGTAGCATTACTAAAAATGTACACATCATCAGACTGTCAATATGAGGTGACAGTTAAGACTTCCTTTTCACAAATACTTGGACAGGTAGTTAGATTTCATGGTGGAGCACTTCCTGCTTATGTCATATCTAGTATCCTTCTTGCTTATGGAGGACAGTTATACTCTCTTTTCTCAACAGGTCATTGCTTAGAATATGCTACTATGTTGGATAAAGAAGCCAAACCATACAAAGTTGATCCTTTTGTAATTATGGTTAAGTTTCTGTTGGGGCCCTCTGAACTTCCTAAAGATATCAAGATAATATCACCAGACTTGCCCATTTTGACAATTATTTTTATCCTCATTAGCTGGACAACTTGTGGAGCCTTTGCCATACTTCTTACTTATCTTTACTATGTGTTTAAGATTGTTCATCTGCAAGCCAGCCTAACAATGTTTAAAAACAGTCAGACTGTGAATCCCAAACACTCTAGAAGAAGTGAAAAAAAATCCAATCACCATAAAGACTCTGCAGTACACCATCTCCGCTTATCTTCCAGTGACGCTGAAGATAGTCTTCGCATGCACAGTACTTTGATTAACTTATTAACATGGATTGTATTACTCAGCATGCCATCTTTAATTTATTGGCTGAAGAATCTTAGGTATTACTTTAAACTTAATCCTGATCCATGTAAACCTTTGGCATTTATCCTTATTCCAACTATGGCAATTCTTGGAAATACTTACACTACTTCAATAAAGTCAAGTAAATTATTGAAGACTACTTCACAGTTTCCACTTCCTCTGGCTGTTGGTGTGATTGCTTTTGGGTCATCACATTTATACAGGGTTCCATGCTTTGTCTTCATTCCTCTTTTACTCCATGCATTATGCAACTTTATGTAAGATTGGATTTAAGGAATGATAAAGATGATTTATGCCTTTAGGGACAATATTAAGTGGGAACAACACAGATCCATCAGTGTCGACAGCAAGATCCTTTGGAGAAGACAAGTCTATTTTTACAATGTTGAAGATAGGAAATTAGTTTTGTAATGCTTGAGGAAAGTAGCTGAAGCATGGTTTTGTTTTGTGGTATGACATCTGTGTACTAGTCATTTTTGAAAAATTAGTAAAAGGATATGGTGGCCACTGTCTTTGAGGACTTCTCTGCAGAACTAGTCTGCTTGATTGGCCATGCCAGGATCTTCTCCTAAACACTCAGTAAATGTAGCATTGTTTTTTGTCTCATCACCTCAAACATTCTGCTCATTTCATCAAGCTTTCTTCTGAAAAGTGGGTTACTTTGTATTTGCTACACTATATATATTGAAAAATAAGTCTTAAAAGATTAATGAAATTTAAACTGCTTTATCAGAAATAAAATAGCCACAATCTTTAGTTTTTGGCAGCCAGAGTGAACAAAATAGATCTTTTGTTTTCTTACTTCTGTGAAAATATGCTTTAAGTTCAAAAGAGACATGTTTTCTTGATAACCAAGCAAGATTAGTGAATAGAAACATAATTCAAATTTAAAACTTAATGAAAATTTCTTCTTGCTTTTCAAATAAGAATCTTATTTTGTGTTCTTAGTGATTATCAGGAGACTATTAAAGAAATGTCTTGCTAAATTTGAGGCAAATTCTCATAGATATTTACCTGTAGGCATTGGAGCAGTTCAGTCATTCAGTCTGTACCATTTTATTTAATTCATTGACCCCATCGTTGCCAAGTGTCTCTGGTCGTGATGGATCATTAAAATAACTAAATTCCAGTAGTCAGAAAAAAAACTCTGCATTTGCACAGTTTTTGTCTCCTATAGGGAGAAAAATCAGCATGATCAAGTACAGTACTACATTTAATGTATAGAATTAAACTATTAATGGAATAACAGTTTTTCCACAGTGGATAACTGTTATTCCATTAATAGCATAAGTATACACAATATACCTGAATAAGTTGGAGTATTTAGTCACTAGGTTTAATAGTAGAATCTTAATTTGCCAAGGTAATTACTAATTGACAGATAAGAGTAATATTACATTTCATTTCAGATTTCAGCTAATTTTTAAAAAGTAGATGTAATTCAGGCTGGGGTATACTGGGTGATAGAGTCCTTTCTTCCAATGTGTATGCTGTAAATACCCAAAACCTTTCAAGTATAGTCCTTATGTTCCAGTAACTTCACAGTTGCACTTGTGAACTTGTGTCCTTGTTAGTGCCAAGGAATGTCCAAAAGTACCAGGTTCATTTTACCTGCCATTGCAACCAAATTCCATTACAGCCTCTCAGCTGTTACTGCCTATTAGAGAGTCACCCCCATTTTACTGCGTGTAGAGGGTTACCTCACTTCTTTTCTAAGTTGTCCGTCAGGTTGTTACTGTTTTATCATCATTTGAAGAGGATCTTGCTGTCATCTCTGAGAGTTATAAGTTTTTTTATTCTATTGTTCTCTTTCTCAGCTTTATGTTCAGTATTCATATTTTCACTTACTGGGATCATTAAAGGGAAGTGATAACCTTATAATAGACATGGCAGGCATACCAGGCTCTTGTTTGCTAAAAGTAGCAAAAGGGATTAAAATACAATAATGCTTGTGTGTTCAAACCTGAAAAGAAAGAGTACACTTTCCCATGACATGTCACATACATATTTAAACAAGGATACATATGCCTAGGTTTAGCTATACACACGTTCATAACAGCTTTTGCACATAGGATGTCTTTTGTTTTTTCACTCAGGTGTAGTTGTATTTCAAGTTACAGGTTAAATATGTCATTTAAATATTTCTAAATTTGAATTTAGTTCCATATACAGAACCTAAGCAAATTCATTAATTAGAATCTTCTAATTTGGCCTGTACTTTCATCACAATTGACAGCTATAATTGTGTTTATGTGATCTAAAGTCTCCTTGTTTAGTCATTTCTGCTCATCGGTAAAATGTAACAAGCTTAAATTTCTCATTTGTGGGTAGTATGTTAGCTTTTTTTTTTTTTTTAATTAATTTTATTCTATTCTCAAACTTTACATAATTGTATTAGTTCTGCCAGCAAAAGAGACACTGACGTATAGAACAGTCTTATGGACTCAGTGTGTTAGCTTTTTAAAGCAGCAGATTAGGCACGCTAATCTTCATGAAAATATTTTCATGTGAGTGTAGTTACCATGTAGTCCTAAAGTCTTATTCCAACAAAATATTTCATTTTAGGACCACAGAAAGGATTCTAATTAAGCATGTATAAACAACAGTCGTTTGGGTTCTTATACATAATTCACACACACACACACACACACACACACTCATTTTCACAGGGTCTTCATCAAGTCCTAATGTAATTTAAACCCAGATAACTATCAGAGATGAGAAGGTAGGCTCTTTCTGAAGATTAGTAAAACTAATGTTTCTATCACTTGAGAAAATGAAAGTCCCTTGTCTTTAAATTACACATTCTTTCAAGCATACCTAAGACCTATATTATTAGCTGGCAAAACAGCACAGGTTCATCAGAAATGTTACTAAAAATGAAACTTTATTGGCAGTTAGGGATTGTCTCATTTAGAAAACTTCTGAGCTTTGTTGTCATAACATCTTTATTTAGATTTTTTTGAGTTTTTAACTTATAAAAATTACTCCTAGACCCTATTGTTGATACCTAGATCAAATATAGCCTGGACTGGACAAACACTGAATACTTTCAGTGTTTCTAAAGACTCCTCTGGAGTTACTACTGTTAAAATTTGGAGCAGATAATATGATAGAAATTATTAACACTTTTTTCTTTATCTTTTTCATGTTAGAAAGTACACAATTTCTGCTAGCTTTTTTCTTGATTCTCACCAGAATGAAAGTATTTAAAACACTAGTCCTAAAAAAAAACCATTTGTGCCTGATTAACACTGACTTTGTGTCTCTTCAGTATATATTGATCATGTATTGATTAATCTTTAATTTTTTTTATATTTCAGTCAGATAAGTTCCTATGTATATAATGGAGTACTTCTCGTTTGAACTACACTATAATATCTGCATGATTATACAGTAGGGAAAAGAAAGAAAGAACTATAATAGGCCTAGTAAATGTTTTTTGTTGATTATCCTGCCACTCTCGCAGATGCTACACATTGCCACCACACATACATACTTTCATGAGACAGATTATCTGATTTGGTCATTATCTATCTAGTTCCCATTCTTAACTCTTCAGGTTTTTCAATTACAGCATAGTGTATTCTTTTTACCTCACTGTTGATTAGCATCTCTTACAGAAGGTGGTCAAGGGAAGTAAAACAATTAAAGGTAAAACTCAGTTTTCAGTTTATTCTTGAAAGCTCTGGAGAAATAGGAAAACAGAGACGATGAGGTAAGCTAGAACTGTTGATTCCTGAATCCCAGACCATTCAGTTGGCCTGTATTTTATGTCTTGCTTTATTGTGAGGTTTAGGGCAAAACCTTACAGTGCCACATTTGCAATGTTTTAGTGACTTGTTATTAAAATTAGTTGGGAAGAATTTTTTTAATGTATAGGGACTTCTGTGACTAAGGTATTTGTTGATTATTTTTTATCATCACTTTGTGTTTTCTCTGTGTTTTAGATTTATGAAATTATAGGAAACAAGATAACCTTGTGAAGTTTTTTTTTTTTGGGGGGGGGGATGGTCAATTTGAAGAGTATAGTACTCCCCAGGAATAAAAGAAGCAATAAAAGTCTTTGTGTTATGAAATTAGACCCAGACAGAAAGCTTCTTGCCATGTAAGGTAAATGTAGAAGATATTTTTACAAAATGCTAAGATGATTAGGAACTGAAATTTTATCCCAGTATTTTGGAACAGAGGACATTTCAAGTTCTGTAATGAACTTTTGCTTATACATTATTACTCATGCATTCTTTCACAGTATGTTTTAACAGCCTGAGGAAATAGAAAGCTTGTAAGGCTACTTATGTTCTTTACTTTTAATAAGAATAATAGGAAAGAAAAGTCAAATCAGTAATCCAAATCTGAATATGTGTACTCTAAATGCTCAAGAATTCACATTTTTTATAAATTATATTATGATTACAGATGACTGAATTTTATATATTAGTAACTTAGTCTGAAGAATGGAACAAAATTTGGAAATAAACTGTTATTTCATTTATAGTAGAAATGTAGCAATATACCTGAATTGGTAACATCACTTTAAAAAGTTAGATGATATTCTAAGCTATTGCTACATCTTGATTACATTGTCTCTAGCTGAAATTTTTTAAATCAAGTGCAGTACTTTCTAAAAGTGTTTTGCATGTTATGCTGCCAAAAATGACTATGTTTTGAAATACCAAGTAACCAGTTAATTTCTAATGGACTTTGTATGGACTTGATATATATGAGTCAGATTTATTCTGTGCTCATTCTGTACATTATAACCTGAAACACTTCTGAAAAACTGTATCTGTTGATGTAGTTTGATTAGTTAGTGAAGATTTGTTTGCATATGTGAACCCTAATCCTAGTTTAAGAACTCTAGAAGTAGCCATTTTTGTAAAGTTCATATGCTAATTTTTTTGGTGGTATTTTGGTTTTTAGTATTTATATAGTAGAAATGTTACTACTAAAAGATTTATAGACAAAGCATAGAACTATTATTCAAAAGCCTAAATGATAGGCATGTTTTGTATTTAATGTTGTACTTGTTTTGTTTCATATTGGACTTTTTACATCCCTTCTTTTAGGGAAAAAAACCACATTTGAATTTTTTTTAGCATAAAGCTCTGCATTGAAAATAGAACTGTATTCATATGGTTAGCAAAACACACTTTGCCACCAAAGCTAAATGAAATTTTAAAATACCTCCAGATATCCGTGCCAATGAACTTTTCTTACCATATTGGGATTAAAGCAAAAATAATCTTTTCAGTATTTTTCTTCTAGGACTTATATTAAATATGCAAATCATCAAAATTTATATTCTGTATCCTGATTTTTCTTTGAAAATATATAAAGCTTACAGAATAGTGTATTCTATTTTGTCTGATTTCTGAAATAGTGTTTTCTGGTTTTATTGGATGAAAATTAGTTTACCTGATAATGATCTTTCAGTAATTGGTTGAAGAAATCATTTAGGTAATCTTGTTTCAGATTCATTCTGTAAAACTTTAAATTCTATTGCCCTGATCATTTTTAGTACAGGTATCTCTCATTTATGTAATAGAAAGTTTTTTGTGGAATTTCGTTCATTTTCTATGTTTTTCCATTCATTCCCTTTCTACAGTCACACGGGGGAAATTTATCCACTGGAACGCAACATAGTACAATGAAGTAAGCACTGTAAAATGGAAAATGTAAAGACAATCAAGATGTTAACGCTAAAGTGTTAACATTGATGTGGTAGTGTACTCATGAGAGAAAAGCTGGAATATGATAGATTCAGAAACTGTTGTGTTTATATGGTTGAAATTCTTCAATTTCTCTCCTATAGAAATTTTCACAGGGAATTTCAGTCCCTCATTTTACGGTTTTCCCCCTAATTTAATGTCAGTTAACTGTTTCTCTGCCCAGTCATGTTGATGCAGTTTGCATAAGTAGCCTTGGAAGTAAAGAAGCAACAGATAAAGCCAAATATTAAAGTGTTTGGCCTTGATTATACAATTATCTGGTGAGGGTAGATGATAATAAAAAGATGATGTATAAGATCTAAAAATTCAGTGAACATTATTTTTGGAATGAGTGTGTCCTTTGTGTTGAATAGTCCTAAATAGGAGATGCCTGTATTTAACATAACCATGTTTTCTTTATAATCAGATATGTATTTGTTGGAATATTGGTACAAATAATCTTCTCTGCCTCTACTGTAGAAGGAGAAAAATCCAGTTTTTAGTGTATATAAATTAAGAAATTGTGTATTTACATTTTAAAAAATAGAAAAATGATTTAGATATATTGTTTTGAAGTGATTGTATTACCATTTCTTAAGCTTATGGCTAACTATAAATGTAGCAACATACCCGTGAAAAACCAGACCAAAATTGAATGCATATTAACACTGTGACCTTGAACTTATAGTTGTTTGGGATAAAATAGACCGTGCCTTAAAATGCTGAAAGAATGCCATGAAATTTTATAATTATATATTTTAGTATTGGTGGTCTTCTCAAATTGGCCCCAAATCCTTTTGTTAAGGCTGGTGAAGTAAAAAATTTTAAATAACAGTTAATCAGTATTACCCTTAGTATAAGCTGAACTATTGCTCCACAGGCCTCTCTTAATTTCCATAGTTCCCATTTCAAATTAAAATTAACTTCATAGATGTAGAAACTAAGTTTGGCTACAGTTTTTGAAAATAAATTTATTTTAGGAAAAGGTAGCATTTCTGAGATTAATACACATGAAAACGTAACCTACAAGTGTATTTTTTTGTCTTTTTAATGAATAATTATCAAAGACATGAATTCTTCTTTAAGACATGTACTTATTTTTTTCCTCAGATTATTGAGCCTTGTATATCAGTTAGTTTAGCCAATAATGATTTTTCATTAAATATAAACTCAGATTCATGTATATATTTAAACATTATTTTCCCTTTTACTCTTTTCTTCCTAGTTATTTTTAAGATACCAAGAGAAAACTGGCCCCACTTTTTAATGGATTTTCTTTTAATATAAAGACTTACATTTTTATTATGCTTATTTAGAATAATGGATATAATTTCAGTCAAAACAAATCGTTCCATTCATAGGATGTTCATGGTCTCTGCTAAAAGATGCCCATATCTCCGTGTACTCAGAATTTTTTGTATATTTTTTATTTATAATTTTGAATATAAACTCAGCATTTTTCTTTCTTCTCATTTAACCTCCACTACCTCCCATCAAAGACAAAAATATAGGTTTCTCTGAAAGTGTGTAGAAAGAAAATGTCTTTCCTTAAAGCATGGTCAAATTGATATGGAAATAGTTTGGGCAAGGGTATGTAATACAGTAAGAAACATGGCTGTCATGTCAACCTGCATCAGTTTCTATATTATAGTTAGAAGTTTATAGAGGACAAACTATGTGTTAGATTGAGATAGACTCAGTAATCATTAATTTGCAAATCAGTAATTTTATTCAGAAAATGTAGCACATAATACTTAGCAGTGCAAAACAATTCATCCTATAATATATACTGAAAAATGATTGTCATCTTGCAGATTTTTCCTTTGAAACATGCATGACCTTCTCTAGTACTTTGTACAATGTATGGTATACTAAATATATTTATGTGTAATTTTGTGTGTACTTTTTGTATAATTATAATTAACATTATTATATTTAACTAGTTGTAATTCACAAAAAGTGCTATTTATTGTACTCCGTAGAGTGTTGTGAATGTTTTTATCTGTGTTTCAATGTTATGGTATAGGGTTTAATAGACGAATATTTGCCTTCAGTCTCCGCTCAGGTATTAATGTGTAGCATTATTTGGTGCTTTCTTTTTAATCTGTCATAATTTGATGTTCTGAATGTTCAACAATAAATTTGGAGAACAAAAACAC EMBV3_26777 AAGAGAGGTATGACCTTGTTTTCCAACAACGATGCGCTGCTGAGACGGGGCCCTGAATAG Gene BVV0102_010013 + 0 NULL GK000014.2:25560880-26050241 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00055470 1 XLOC_033278 NonCoding TCONS_00055470 XLOC_033278 NonCoding NonCoding - 14:25991341-25991721 - TSS41147 380 1 TCONS_00055470_2 71 1 0 0 0 0 0 0 0 0 0 0 0 7.22900823863072e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0809321773861805 0.52773547985876 0.0201257592394915 0.659443937242662 TCTCATCTTGGGTCCGTTGCCTCCTGCTCAGAAGCTCAGAGTCAGCTCCAGCTCCACAGTAGATTTAACAGAATCTATTCAGGGCCCCGTCTCAGCAGCGCATCGTTGTTGGAAAACAAGGTCATACCTCTCTTTAACACCAAAATAAACTGATAAATGCCTGTGAATGGAGAAGGAGTGGAGCGAAGTGGCCGGCCTTCAATCCTGGGGCGTTTGTTACCGGCTGGAAAGGAGGCCAGGCCCTGTGTCTCTTGGGGACGGGAGTATCTGTGAATTGAGATCCTGGCCTCCTGGCTGCAGGGCGACACTTTTGTCTTCTGTCTGGCTTGGCAGAGAGTCAAGCAGAATGGGAGCTCTCAGGGTGAACTTGGTGTCACAGT TCONS_00051557 . 5' 324 TCONS_00051557 . 5' 324 EMBV3_13070 GTGGTGATGAAGCGGAGATCCGGCCAGCGCAAGCCGAGCCGCCCCACCAAGAGCTCCTGA Variant GeneID:618702|RPL28:NM_001035503:196_cdna 256^426 2 EMBV3_03640 GeneID:618702 18 GENE RPL28 MGC127438 ribosomal protein L28 EMBV3_08177 GCTGCCGGGCGGTCCGGGGCTGCCGGCCAGGGACAGCCCGGAGGCCGTCCGCGATGTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20541 AGGAGATGAGGTCCAAAGACCCCCCACAACCAGTCACAGTGCCAGAATCGTGCATTCTTT Gene BVT0102_139513 + 1 EMBV3_12154 GK000029.2:43154676-43159738 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163806 1 XLOC_100035 Coding TCONS_00163806 XLOC_100035 Coding Coding VEGFB 29:43155132-43157956 = TSS122705 1186 2 TCONS_00163806_2 131 6 0.582004959263195 1.14719268615218e-05 0.000101670540453889 9.36323432570758e-05 0 1.24886534373989e-05 0 7.37568927214465e-05 0 6.65272397002685e-06 0 3.86034681671112e-06 0 0.000626596381438662 1.1898820836402e-05 6.79610739149465e-06 0.00160340052425233 0.00239375152672811 0.000169247271676318 0.00015720417865073 4.24451139532511e-05 0.000168936264963226 0.00208354413279251 0.000672970645336497 0.00038165590716806 0.000554978379188023 0.00102771139932328 3.45817659815257e-05 4.85927785323907e-05 0 1.01386907975399e-05 XM_005227219.1 VEGFB PREDICTED: Bos taurus vascular endothelial growth factor B (VEGFB), 0.0 2028 100.00 0.946880269814503 NM_001243733.1 VEGFB Homo sapiens vascular endothelial growth factor B (VEGFB), 0.0 1135 85.54 0.828836424957841 TCONS_00163806_2 sp|Q9XS49|VEGFB_BOVIN VEGFB_BOVIN Vascular endothelial growth factor B; 1e-50 164 84.00 0.755725190839695 1 coding 0 0 0 0 -0.0216684039562753 0.850358501316362 0.0627555360761812 0.347425973683828 GGGGAGAAAGACATTGCCAAGCCCTTCCTGGAGTGCATCTTGGTCCAGATTTCTTCTCTCCTACAGGCCCCCGTCTCCCAGCCTGATGCCCCTGGTCACCAGAAGAAAGTGGTGTCATGGATAGACGTGTATGCTCGTGCCACCTGCCAGCCGCGGGAGGTGGTGGTGCCCCTGAACATGGAGCTCATGGGCACTGTGGCCAAGCAACTGGTGCCCAGCTGCGTGACAGTGCAGCGCTGTGGCGGCTGCTGCCCTGACGATGGCCTGGAGTGCGTGCCCACTGGGCAGCACCAAGTCCGAATGCAGATCCTCATGATCCAGTACCCAAGCAGTCAGCTGGGAGAGATGTCCCTGGAAGAACACAGCCAGTGTGAATGCAGACCAAAAAAACGAGAGAGTGCTGTGAAGCCAGACAGCCCCAGGCCCCTCTGCCCACGCTGCCCCCAGCGCCGCCAGCGCCCTGACCCCCGGACCTGCCACTGCCGCTGCCGACGCCGCAGCTTCCTCCGTTGTCAAGGGCGGGGCTTAGAGCTCAACCCAGACACCTGCAGGTGCCGGAAGCTGCGAAGGTGACAAACTGCTTTTCAGACTCAGTGGGGCCCCTAGCCTCACAGCCCTCCCCCCAGAGAGGGCAGGAGGGCAGCCTGGTGAGAACCGTCCAGTCGCCAAGACCTCAGCCTGGGCAGAAGCTCCTCCGGGACCTGGGCCTCTTGGAGGGCCTTCCAGCTGCCCCTTGTCTCTCCAAGGCTGCCATCCAACAACGTGGACAGAGTTGGATGAGGAGACCAAGAGGGGTCACATACCAACCTGGAAGAGAATGGGGTCCCGACTCAGATTTAAACCACCTTGTACAAGTGAGCATCTAACAGCTGGCTCCTCTGTCCCCTCACTGAGAAGACCCCAATCCTCTACAAAAATGTGGGAGTTGGGCTTCAGCGCAGGAACTGTGAACCCCAGTCCTGATAAAAGAGATGGAAGGAACTGTCCCTGCCTGTGTCACTGTCTGTCACTGTCCAGGCTGGCTGGTTTGGACATCAACGTCTGCATTGTACTGACACGGAGCTTGGAGGAGATGAGGTCCAAAGACCCCCCACAACCAGTCACAGTGCCAGAATCGTGCATTCTTTACTTTCATGTTGCGCTAACGGGTCCTGCTCCTGTGTCCATCACAAGGGTTCCTTTCTGA EMBV3_30918 GAATTTATTGAAGTGGTCCTGGAAAGGGCATGGCTTGGACTAGAGTGGCTTCAGTAGAAG Gene BVT0102_065409 + 1 EMBV3_08170 GK000005.2:112367028-112510410 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30160 GTAGTCATTGAGGATAAGCCTTGTAATGTGACTTGCCGTGCACTGAACTGGACCCTGCTC Gene GeneID:511594|IGSF5:XM_002685110:18_cdna Constitutive 0 NULL GeneID:511594 1 GENE IGSF5 NULL immunoglobulin superfamily, member 5 EMBV3_20151 CGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGATCCTCA Gene BVV0102_305462 - 0 NULL GK000014.2:18201277-18223495 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00137036 TCONS_00055131 2 XLOC_083246 XLOC_032940 NonCoding TCONS_00055131 XLOC_032940 NonCoding NonCoding - 14:18213518-18214424 - TSS40808 906 1 TCONS_00055131_1 75 1 0 0 0 1.021411932236e-05 0.000174149038931282 0 3.94818833818107e-06 0 0 0 1.81655153473041e-05 2.52669646612316e-06 0 0 0 0 0 0 0 0.000443235979589287 0.000134938667180426 0 0 0 0 0.000107062569187718 0 6.03591102750738e-05 1.06017458845958e-05 0 0 XR_229562.1 LOC101904225 PREDICTED: Bos taurus uncharacterized LOC101904225 (LOC101904225), 2e-22 111 88.37 0.0938189845474614 NM_138348.4 FAM105B Homo sapiens family with sequence similarity 105, member B (FAM105B), mRNA. 1e-06 59.0 83.64 0.0596026490066225 0 noncoding 0 0 0 0 -0.00762736734284999 0.964525625072624 0.0042223791999644 0.940848065271779 ATGCTTGTGGGCCCCCACTCCAACTGATTGAGGCTGGGGATATCTCTGTGATCATAGCACGCAGCACCGGGCCAGGAACACCAAGAAGTGTTTCACGAGATTACGACTGTGCAAACGCTTTGTAAGCACTCTACAAAAATAAGACTTTACAAGAGTAGGAAGAATCTCGCGGCCCAGGGTCTCCCCTACTCAGCGCCGGGGGTCCAATAAGCCGCAGTGTTTGTTGATTGATAACCAGACCATCAGGCGGAAGAAGACCAGAGAGGCGTGAATGGTTCAAGTAAGGCAAGCGCCCCGGCGGGAACTTCGGTGTCCCGGGTCAGAAACTCTGCGGAGAAAAGTGAAGCTGTGATTTTCTGAGCATGCGCACTGGGCCGCCGCAACAGCCTCATTATCCTGCTCCCGGAAGCTACTCGTAGGTGCCTCGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGATCCTCACACGGGGCACAATACTTTTGCTCGCTCCGGCTTTTTTCACTCCTGCTAGAAAGATGGGTTTTGCTTGAGTAGACCCGCAAGCCCCGGACGTCCGTGCCACCGGCGTGCTGGCTTCGCCTCCCCGAAGTACCGAGTGCTGCGCTGCGGGCTCCAGCGTCCTGGGCCCGGGTGGAGGACTGGAAGGCAGGCCAGGGCATGAAGATAAAAGGTTGGGGGGCGGGTGTCCACGTGAGGCAGACTAGCGCACCGTGGGCTGGGTACCGGATGAGCCCCTCGGATAGACACCCACTCTCACCTCTAGCGCTACGAGTCCGGTTACCCAGGAGGTGCACTCACCCCGCCATCCCGCCCTCCACCAGGGATCCTGCCCTGGCCCCTGAGCCCTGTTGGTGGCGGGGATGTGTACAGCCCAGGGTGAGGG TCONS_00052868 TCONS_00052869 TCONS_00052870 TCONS_00052871 TCONS_00052872 TCONS_00052873 TCONS_00052874 TCONS_00052875 TCONS_00052876 TCONS_00052877 TCONS_00052878 TCONS_00052879 TCONS_00052880 TCONS_00052881 TCONS_00052882 . 3' 8919 TCONS_00052868 TCONS_00052869 TCONS_00052870 TCONS_00052871 TCONS_00052872 TCONS_00052873 TCONS_00052874 TCONS_00052875 TCONS_00052876 TCONS_00052877 TCONS_00052878 TCONS_00052879 TCONS_00052880 TCONS_00052881 TCONS_00052882 . 3' 9824 EMBV3_15614 TGCTGGTGTTAGCAAGGGCAGCCAGCGAGAAGGGGTTTGGGACAAGAAGAGTCAACATTT Gene GeneID:527289|LOC527289:XM_002688233:156_cdna Constitutive 0 NULL GeneID:527289 6 GENE LOC527289 NULL similar to glutaredoxin cysteine-rich 1 protein EMBV3_12343 TACAAGTTACAGCTTGAGGAAGGGACTTGGACACCTGCGGAAATTCGTGAGGGAGTTCGG Gene BVV0102_021554 - 1 EMBV3_05246 GK000008.2:60409621-60427216 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13587 ATCTCCTGGGTGGGGATACCTTGCCATCTGAACCAGGACATTGCTAATTCCCTAGGCAAA Gene BVV0102_355430 + 0 NULL GK000006.2:8730226-9049870 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00240353 1 XLOC_147017 NonCoding TCONS_00240353 XLOC_147017 NonCoding NonCoding - 9:44686462-44687167 - TSS180031 705 1 TCONS_00240353_1 48 0.260992907801418 1 0 3.43993194123117e-05 9.90044706300851e-06 1.75606410269832e-05 7.00120284796819e-05 6.30954746320674e-05 9.20670572514371e-05 1.6400905950527e-05 2.96203523126883e-05 0.000123497225707236 0.00146380204991478 0.000312405547685606 0.000650286602896945 0.00042207795447524 0.000792024755913193 0.00111912044111737 0.000632165868343477 0.000304793405972807 0.0023999580279857 1.8493701477614e-06 8.15462680708717e-05 5.35587324644337e-06 0.000904257901889773 0.00202539886518054 0.00159092951597098 1.04418552244237e-05 0.000115450821780707 1.75492114691387e-05 0.000507407374777412 0.000725452570537894 0.0015974980281715 XM_005199987.1 LOC787624 PREDICTED: Bos taurus uncharacterized LOC787624-like (LOC787624), 1e-55 221 83.33 0.30354609929078 0 noncoding 0 0 1 1 -0.136100451165874 0.299299378054393 0.0352489394230892 0.578878670718135 GAGAGAGCAGACAAGCCACAGGCAGGCACACAGACAGACACACAGACACTCGCACGCACCCACGCCAGGGGAGACATCTGGCCTGCGCAAGCTCCTCAGCCAGAGCTAGAGCGCCTGGGAGAGGCGGGGGCAAGACGAACGGGCCGGCGGCTGGCTGTCAGGAGATACAGAGGCAGAAATACATGAAGATTCCGAGACAGACTCCAAGACGGCAAGAGGAGATACACACACACACACACACACGCACACACACACACACTTGAGTGTGGTCTTTGGAAATACTTGTGTTCGTAGTTGCTGGCTTGAGCCCAACTTTAATATAACCCATGGACTGCGGCCCATCAGGCTCCTCTGTCCGTGGCATTTCCCAGGCGAGGATACTGGGAGTGGGTTACCATTTCCTTCTCCGGCGGGATCTTCCCGACCCAGGGATCAAACTCCAGTCTCCTGTGCGCGGATGCCTTGCCATCTGAACCAGGACATTGCTAATTCCCTAGGCAAAATACAAAGAATAGAGCTCGTGTTCTACTAAATGGAAAGATGATTTCAAAAACAGAAGCTGTCCTTTGTTGGTATCTGTGAATCTTTATGTAGTTTTCGTTGATTTTTACTGTTAAGGCTAAGTGAACAAGGCAAGAGAGAAACCCCAGAATTGAAAAGCAATTGACGGTTTTGAAAGAAACATGTGCAGGTGAAGCTCTCTTC TCONS_00237305 . 5' 228010 TCONS_00237305 . 5' 228010 EMBV3_14510 CTGGTTTTGGAATAGCAGCCTCACACTGGCACATGGACTGATCTCTAGAATAATCCAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09293 GCAGACCTCTCCAGTGGGACTCTACTCCTGCATCTACTGGTATTGCTGTATTCATGGTCA Gene GeneID:537630|GPR180:NM_001164031:41_cdna Constitutive 0 NULL GeneID:537630 12 GENE GPR180 NULL G protein-coupled receptor 180 EMBV3_41020 AGTCAGACCTGGCTTCACTCTGGGCTCTAGTGTATGGTGACCAGGTACCTTGAACATGAT Gene BVT0102_184133 + 0 NULL GK000011.2:2005654-2079468 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023722 TCONS_00023723 1 XLOC_014344 Coding TCONS_00023723 XLOC_014344 Coding Coding PROM2 11:1985891-2007668 j TSS17583 4537 1 TCONS_00023723_6 902 0.0454044522812431 27 0.792891256429096 0.000482871120769713 3.8923893197864e-05 4.71920031643548e-12 0.000147045647567869 2.14491692505734e-05 9.97215516178151e-07 9.139602611797e-06 0.00010417209458621 0.000172132534565715 0 0 0 1.77730805232685e-06 1.23896160391556e-09 1.07156786282411e-13 2.63882114446226e-05 0 0 0.000529520146930019 0.000104281526171964 0.000134402029257637 9.00790725534835e-06 0 5.55014500617164e-06 3.43317576161949e-08 0.000796738689057856 1.90176854000778e-18 0 0 0 XM_005212378.1 PROM2 PREDICTED: Bos taurus prominin 2 (PROM2), transcript variant X2, 0.0 6127 100.00 0.74851223275292 NM_001165978.1 PROM2 Homo sapiens prominin 2 (PROM2), transcript variant 1, mRNA. 0.0 2910 75.99 0.901917566674014 TCONS_00023723_6 sp|Q8N271|PROM2_HUMAN PROM2_HUMAN Prominin-2; 0.0 1230 78.30 0.89689578713969 2 coding 0 1 1 0 -0.0326517895756305 0.813857124525993 -0.0120905829971635 0.837770083410193 ATGCTGCTGGTGTGGAGCCCTGAGAGGCCTGCAGTGCCCACCCTCATCCTCGGCGGCCCACCCAATGGGAAGAAATGGATGCACGGCACCTCTAGGGGCTCTCTCTTCGGGCTGGACCACAGTGTCCTGGGGGAGACTGTTTCAGCCCAGGCCTCCACCCCTGGCCCGGCCGCGCTCGGGCGGATGCCCAGCCTACTGGCCGACCCCATGGTGCGCTCGCCCGACCTCCTGGCGGCCCTCCTGGGCCTGGGCCTGGGGGCAGTCCTGACCCTCCCGGGGGCGGGCGCGGCGGGCTGCAGGGCCCTCGGCCCGGCGGAGCGCCTGGTTTTCGCCCCGGCGGCCAAGGCCCGCTGGCTGGCCCCTCGCGTCCGCGCCCCGGGACCCCTGGACTCACTGTACGGCACCGTGCGCGGCTTCCTCTCCGTGGTGCAGCTCAACCCCTTCCCCGCGGAGCTGATAAAGACCCTGCTGAATGAGCCGGCCTCTGTGAAGGTGGATGAGGTGGTGCGGTACCAGGCCGGCTACGTGGTGTGCGCTGTGATCGCCGGCCTCTACCTGCTGGCAATGCCCACCGCGGGGCTCTGCTTCTGCTGTTTGCGCTGCCGCCGGCGCTGCGGTGGTCGAGTGAAGATGGAGCATAAGGCGATGGCCTGCGAGCGCGCTGTCCTCGTGACGTTCCTGCTGCTGACCACCCTCGTGCTGCTGATCGGTGTGGTCACTGCCTTTGTCACCAACCAGCACATGCACGAGCAGATGGGCCCCAGTGCCGAGGCTGTGCCGGAGACCCTGCTCAGCCTCCGGGGCCTGGTCTCCGAGGTGCCCCTGGAGCTGCAGGCCGTGGCAGAGCAGTTTTCCCTTCCTCAGGAGCAAGTCTTGAAGGAACTTAATGGCGTCGGCAGCAGCATCGGGAAGGCGATCCACTCCCAGCTCAAGAGCACCATGTATGAGGCGCTGGCCTCAGTACTCAGCCTGGGCCAGGCCCTGCAGGTCTCTGTGGACCACCTCCGAGGCCTGAACGCCACCTCTGTGGAGCTGCAGGAGGGGCAGGAGGCCCTGGCACCGGCTCTCCATGGGCACCGGCAGCGCCTCCTGTCACTACTGCAGGAGCCCCCCTGCCAGGGCTGTGCAGGGGCCCTGGACAAAAGCCACACCCTGGAGCTGGGAGCAGACTTCAGCCAGGTGCCCTCTGTGGACCACGTCCTACATCGGCTGAAAGGCGTCCCAGAGGCCAACTTCTACAGCATGGTCTTGGAGGAGAACACCACCTTCAATGCCCTCCCGATCCTGGCTGCCTTGCAGACGGCCGACATGATCAGCGAGCTGAAGAAGGTCGTGGCTGAGCAGCCCAGAGGGCTAAACACAATGGGAGAAGCGTTCCCAGTCTGGGAGGCAGCTTCTCGCTGGAGCCAGGCGCTGGAGGAGGTCGAAGAGCGCAGCCGCCCCTTCCTGGAGGAAGTGCAGAGCTATGAGAGATACAGGTGGATTGCAGGTTGCGTGCTGTGCTCTGTGGTCCTGCTTGTGGTGGTCTGTAACCTGCTGGGCCTCAACCTGGGCATCTGGGGGCTATCTGCCAGAGAGGACCCCAGCCACTCGGAAGCCAAGGGTGAATCTGGAGCCCGCTTCCTCATGGTCGGTGTGGGCTTCAGCTTCCTCTTCGCTGTGCCCCTCATCATCCTCATCTTCTCCACCTTCCTGGTGGGCGGCAACGTGCAGACGCTGGTGTGCCAGAGCTGGGAGAGTGGAGAGCTGTACGAGTTTGTAGACACTCCAGGGAACTTGCCACCGTCCATGAACTTGTCCCAACTCCTTGGCCTGAAGAAGAACCTCAGCATCCTCCTGGCCTACGAGCAGTGCAAGCAAGGGGCCGTGCTCTGGACTGTCCTGCAGCTCAATGACTCCTATGACCTGGAGAAGCACCTGGATATCAGCCAGTACACCATCAAGCTGCAACAGGAGTTGCAGAAGCTCAAAGTGGACGTGAAGAATCTGGACCTGCTGAGCCCAGCCGCCCGCCGGGACCTGGAGGCTCTGCAGAGCAGTGGGCTCGAGAGCATTCATTACCCTGGCTTCCTTGCCGAGATTCAGAAGCCAGTGGTGAATAGTGACGTGGAGAAGCTGGCCCAGGAGCTGGAGGGACTGTCCCAGACCCAAGGCAATGCTACGCTGGGGCAGAAGCTGCAGGAAGAGGCCCGAGGGCTCCAACACCTCCATCAGGAGAAGATCCTCCCACAGCAGAACCTTGTGGCTAAACTCAACCGCAGTGTCCAGGCACTGGCATCCTCTGCCCCACATCTCCAGTCGGAGATCTCAGGTGTCCTGGACAGAGTCACTCACCTGAAAGAAGAGCTGCCGACCTGGGCCACCCATATCCTGAGGAATGAAAGTGAGTGTTTCCTGAAGCGGGAGATGGGCTACTTCTCCCAGTACATGGCCTGGGTGAGAGAGGAGGTGACTCAGCGCATTGCCACCTGCCAGCCCCTCTCCGGAGCCCTGGACAGCGGCCGTGTGATCCTGTGTGACATGGTGGCTGACCCCTGGAACGCCTTCTGGTTCTGCCTGGGGTGGTGCACCTTCTTCCTGATCCCCAGCATCGTCTTTGCTATCAAGACCTCCAAGTACTTCCGTCCCATCCGGAAACGCCTCAGCTCCACCAGCTCCGAGGAGACGCAGCTCTTCCACATCCCCCGGGTCACCTCCCTGAAGCTCTAGGACCCCACCCGGATATGGCCGCAGGGTGGTACAGGGGGCTGCCTGCCTCCCCACTGACTTGGCTGGGACCAGAGGACTTCTGTCACCTTTGCTGCCAGAGCCCAGGCTGGCATCCAGGCCTGGGTTGTCCCGTCTCCAATTACCAGACACCCTCTTGCTAATCCCTTTGCACCCCACTTTCTGCTCATGACCCCTTCATTCATTCATTCTCAAAAACACACTTGGCTTCTTTTGAACTTCAGAGCCAACAGAACCTCCCAGGTGTCTCCCTTCTCCTCCTCCTCGCAGTATATCAGCACCAGGAAGAGCCTGTTGTCTGCCTAGAGGAACCCCCCCAGCCGCGGGGGGTACAGAGACCCTGCCCAACCCCGTGCTGCCCCATCCCCTTCCCTGCGCCTCTCCCAGCCCCTTGCTCACCCCTTCCTCTCCTCTGGCCCCCACTTGCCCTCTTGGCTCTGTTTCCTCCCCGGCCCTCACTTCCTCCCCCTGGGAAGCCCTTTCCCCCTGTGTCCCCTCTGTACCTTATGCCACTATCTGCTGACCCCGAGACCTCTCCTGTCCAACCACACTGATGAGGTAAAGCCATCAAGCAAGCCTGGGCCAGCTGCAGGCTCTGCCTCGTGTCCCCTGAGCCCTCCACTCCTAGGGCACTGGGACCATCCCTCCACAGACCCCGGCCTGGATTTCTGGCCCCTGGGAGTGCAGGAGGCCCATGTGAAGGCTGAGCCCCCGCCTGCACCTTGGGCTGGGAATTACGCTGCTGCCCCTCTGCCCTTCTCTGAGCACTGGCTCCCTAGGAAGGGACCTAGGGTGTGGGCTGCCGTGGGGCTCACCCTCGGCACCCCAGTCAGTAGCCTCTTCAACAGCTACCCAGCTTTTCCAGGAGAGATCTGGTGGCCACAAGAGGATTTTGCACAATGGCCCTTACTCCTTCAGCCCCATGCATGTAGCCAGGTGTCATCCCATCTCCATCTTTGTGTCAGATCCTAGTTCCAGAAGTGGGGAAGAGGAAGAGAGACAACAGGAAGCGGACAGGACCTCGAATCCATTGAAGTGTTTTCACTTGGCTAAGCCTTGGCCTTGGGTCTTTCAGCTCTCCCAGGCTGGGGCCCTGGATGTGGCTGGTGTTCAATGAGTGTGGAGAGGGAACTTCAAGGCCTCCTCTGACCACAGGCATCCAGGGGTCACCCCGACAATGAGCAGATGGGCTGGGGCCCACTCTGGGAGCAGTCAGACCTGGCTTCACTCTGGGCTCTAGTGTATGGTGACCAGGTACCTTGAACATGATCCATGGGTCCTCCAGACCTCAGTTTTTCCACCTGTAAAATGGGAACAGTCATAGCCATCTCATATCTCATACGGTTGTAAATAATGTAACAATGTGTGGAAACCCCTTGGTAGGGGACTCACAAAACAAATACTCAAATGCTGCCATTTCTCTCTGTTTTTTTTTTTTTGCCATGACTACTCTGGGCCAGGGGCAGAGCTGGGTCTGGGCAGATACAAGCGAAGAGGGAGACAGGTTCCTGTTCAAAGGAGCAAAGCCCTTTAAGATAACAATCTGCTGAGTTTTCAGGGGGTGTCTATTTTTAATTGCATCTTACAAACCAGCAACAAATTTGCTACTAGAAATTGGGATGGTGTCCCAATTTTCACTCTCAGACCAGCACCCTTAAATGTGGCACAGCCGCCTCTTTTTGGCTTTTCCCAGAACACTCCTGGCTTGCTTTTCATCTGTTGTCCAGCACGGGGAACTGTAGCGCCTCGCATTTTAAGAATTAAATTGATGGGATAAAAACAGAAAATGATTAAAAATAATTTCTAGTTC EMBV3_25281 TTCTTGCATGTCTGAGAAGATAATGAGAGTAACTGCTTGATAACAGTATAGGCACCGGGC Gene GeneID:507537|SPARCL1:NM_001034302:16_cdna Constitutive 1 NULL GeneID:507537 6 GENE SPARCL1 MGC127494 SPARC-like 1 (hevin) EMBV3_22684 AGCCCACCAAGGCAGAACGGACTTTAAGGGAGAAACAGTCTTGGATCACGTGGTGGTATT Gene BVV0102_030869 + 0 NULL GK000018.2:65172375-65187326 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25240 AGGTGGAGGTGGCCCCGGAGGAAATGGGAGTGTCTTGGACCCTGCCGAAAGAGCAGTCAT Gene BVV0102_268648 + 1 EMBV3_21503 GK000014.2:2031477-2054916 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05372 CCCGCCTGGAGCCAGCGAGAACGAGCTGAAGAAGGCATACAGAAAGTTAGCCAAAGAATA Gene GeneID:530283|LOC530283:XM_002690284:3_cdna Constitutive 0 NULL GeneID:530283 9 GENE LOC530283 NULL similar to DnaJ homolog subfamily A member 2 (HIRA-interacting protein 4) (Cell cycle progression restoration gene 3 protein) (Dnj3) (Dj3) (Renal carcinoma antigen NY-REN-14) EMBV3_36302 ACAACTTTGGGCGTTATTACCAAAGGAACCGTCATTGAGGTGAACGTGAGCGAGTTGGGC Gene GeneID:522309|NSA2:NM_001034546:121_cdna Constitutive 0 NULL GeneID:522309 20 GENE NSA2 MGC128494 TINP1 NSA2 ribosome biogenesis homolog (S. cerevisiae) EMBV3_24832 ACCATCGATTCCCGAAGGTCCACTATGGTGATCTTCGTAAAAGAGACGTGGCAATGATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34161 ATGGTGATGTGATGAAGAACTAAGTGTTCTTCTTTGAGAACAGTAGATCAGAAATCCCAG Gene GeneID:404168|HNF4G:NM_205811:7_cdna Constitutive 2 NULL GeneID:404168 14 GENE HNF4G NULL hepatocyte nuclear factor 4, gamma EMBV3_21755 AGGATTCATTCCTGGATCCCCATTTTCTTGCATGACGCATGTCCTGTATGTAGGAAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28456 GGTGTACGTAAAGTGAGGAGACGGATGGGTCTGCACTCTCTGTCTTCAGCTTAACCCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21671 GGGGATGCTGATTTTCACCAGGAAACTTCATTTGACACCTCCCAGAACTCCAGATCTCCC Gene GeneID:613587|MGC133950:XM_002689604:11_cdna Constitutive 0 NULL GeneID:613587 8 GENE MGC133950 NULL hypothetical protein LOC613587 EMBV3_36298 CGTGGATGTCTCTTATGCCCGGGATGTAACCAAAAATCTCGCTGATCTTGAGGACGAGGA Gene GeneID:532585|LOC532585:XM_002686113:129_cdna Constitutive 0 NULL GeneID:532585 3 GENE LOC532585 NULL similar to Neuroblastoma breakpoint family member 6 EMBV3_10035 TTTCTGGATCTGGAGTGGGACAGATCTGAGAAGAGACCGTGGGGCAGCCCTTTGGAGAAA Gene GeneID:281105|CTSB:NM_174031:2_cdna Constitutive 0 NULL GeneID:281105 8 GENE CTSB NULL cathepsin B EMBV3_16776 CCCTTTAAAAAGAGATGTCCTTGGTGAAAGTCCTGCCAAAGGGCCTGGGCTCCATGAGTC Gene GeneID:781874|LOC781874:XR_084712:4_cdna Constitutive 0 NULL GeneID:781874 8 PSEUDO LOC781874 NULL similar to basic helix-loop-helix transcription factor HAND2 EMBV3_05640 CCTTCAGTATTTGTAGATGCTCCTCCCGCCCCTCCTACTCTGATGGCATTCTGGTCCCAC Gene GeneID:784795|CARM1:XM_002688868:236_cdna Constitutive 0 NULL GeneID:784795 7 GENE CARM1 NULL coactivator-associated arginine methyltransferase 1 EMBV3_29260 CTTTGCGTAACGCCAACCTCAGGCGAGATGGAATATTTCCAACCTGCAGCAGCCTCAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42713 CCTGTGGTAGCTTTGGGAAGAATGTCTCATGTTTCACACTTAATGTTCAGTTCTCACTGG Gene GeneID:785347|TRIM52:NM_001078024:14_cdna Constitutive 0 NULL GeneID:785347 7 GENE TRIM52 MGC140004 tripartite motif-containing 52 EMBV3_08493 TAGGCTCCTACAAACTAGCTTACAGCAATGATGGAGAACACTGGACCGTATACCAGGACG Gene GeneID:538062|EDIL3:XM_002689374:24_cdna Constitutive 0 NULL GeneID:538062 7 GENE EDIL3 NULL EGF-like repeats and discoidin I-like domains 3 EMBV3_40749 GCCTCCGGGACACAGCAGTCTGGTTGCCAAGGCTACGTAAACTCTTAGCAGTAAATGAAA Gene GeneID:540558|MBD1:NM_001046481:170_cdna Constitutive 0 NULL GeneID:540558 24 GENE MBD1 MGC133916 methyl-CpG binding domain protein 1 EMBV3_12946 ATCTTCAACCGTCAACCCAAGGAGCAGAGAGGAGAAGTGGGAGACACGGAATGAAGGACA Gene GeneID:614154|PER3:XM_002694066:189_cdna Constitutive 0 NULL GeneID:614154 16 GENE PER3 NULL period homolog 3 (Drosophila) EMBV3_11250 GGAACATTGTGAAATGGCTGAAAAAGGAGGGTGGCAGAAGGATCTAAAAATATACGGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06340 GGCTTTTGCACACTGAAGAAAACTATCAGCAAAATAAGAGGCTACCCGGCGTCCCTTGTG Gene BVV0101_001685 - 1 EMBV3_14310 GK000007.2:43508497-43548897 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05694 TGCCCCTTGGAGACAATGGCATGTTGGAGGGGTCTGCTGTTCTCAGTCTGTCTCAATACT Gene GeneID:510538|ASF1B:NM_001075453:19_cdna Constitutive 1 NULL GeneID:510538 7 GENE ASF1B MGC139875 ASF1 anti-silencing function 1 homolog B (S. cerevisiae) EMBV3_03929 TCCCGTGTAGTTATACAATTGCCTCCCATTCCACTTACTGAACGTTTAGGTGGTTTCCAG Gene GeneID:506107|BAG2:NM_001034264:86_cdna Constitutive 3 NULL GeneID:506107 23 GENE BAG2 MGC128966 BCL2-associated athanogene 2 EMBV3_34241 TACTTGCTGAAGAGACTTTCCGTTATATGAAGGGATCGTGATCTGGAGCTAGCTGCTCGA Variant GeneID:523970|TRAK2:XM_002685509:37_cdna 680^756 1 EMBV3_06569 GeneID:523970 2 GENE TRAK2 NULL trafficking protein, kinesin binding 2 EMBV3_17742 TGGAATGATAGTGCAAGAGCTTAGAGATCACCTCGTGGTAGTTTCAGCAAAGACTAGTCC Gene BVV0101_077706 - 1 EMBV3_35046 GK000012.2:44823478-45220858 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27691 CATCTAGACAGGCTGGACTGAAGCCAAAATAACAAACGGGACTGGTTCCCCCAGGAAGAG Gene BVT0102_113732 + 0 NULL GK000012.2:21786204-21800764 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036512 TCONS_00036515 TCONS_00036517 TCONS_00036514 TCONS_00036513 TCONS_00036518 TCONS_00036516 1 XLOC_021164 Coding TCONS_00036517 XLOC_021164 Coding Coding SLC25A15 12:21798390-21831678 j TSS26568 3541 1 TCONS_00036517_2 165 0.0327591075967241 6 0.893802385315589 3.57330770846698e-18 0.000415397321359138 1.36477538267353e-19 1.15048046684876e-11 0.000703975245259283 9.79747918273125e-44 0.000612066135677561 0.000481307357003138 0.00069217428344197 7.45530162006871e-05 8.04171484064192e-09 3.33303427501367e-17 9.65806538882708e-22 4.11411100957518e-11 0.000289765349718439 0.00103899696426189 0.000750562276735619 0.00391118229942956 0.000457884890911697 0.00104931616303242 0.000142004957087196 0.00145240589649655 1.69016711825982e-08 0.000780498537663355 9.63847732848084e-13 0.000300655587624633 2.16009701838363e-14 9.18834097249347e-09 8.25685641712156e-05 0.000152299904562476 NM_001046326.1 SLC25A15 Bos taurus solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 (SLC25A15), mRNA. 0.0 1813 99.51 0.287489409771251 XM_005266210.1 SLC25A15 PREDICTED: Homo sapiens solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 (SLC25A15), transcript 0.0 1020 81.21 0.305563400169444 TCONS_00036517_2 sp|Q9Y619|ORNT1_HUMAN ORNT1_HUMAN Mitochondrial ornithine transporter 1; 6e-111 322 92.73 0.993939393939394 1 coding 1 1 1 1 -0.103262038939204 0.514078686569273 0.0115784850048946 0.829754565192129 NGCGGAGCGCGAGGAGGACGCGGTGGGATATGAGGTGCCCGTCATAAGCTCCAGTGAGTCACCCTCCACAGAGCCCAGCAGAGGAGCGGGAGAATATGAAATCCAACCCTGCCATCCAAGCTGCCATTGACCTCACGGCTGGGGCCGCAGTGATCTGCAGAACGCAGCTGCTGGCTCCTTCGCCTCTGCCTTTGCTGCTCTGGTCCTCTGCCCCACAGAGCTGGTGAAGTGCCGACTGCAGACCATGTACGAGATGGAGACGTCGGGAAAGATAGCCAAAAGCCAGAACACAGTCTGGTCTGTCGTGAAGACTGTCTTTAGGAAGGACGGCCCCTTGGGCTTCTACCATGGACTCTCAAGTACTTTACTTCGAGAAGTACCAGGCTACTTCTTCTTTTTTGGTGGCTATGAACTAAGCCGGTCATTTTTTGCCTCGGGGAGATCGAAAGACGAATTAGGCCCTGTCCCTTTGATGTTAAGTGGTGGATTTGGTGGAATCTGCCTGTGGCTTGCTGTTTACCCAGTGGATTGTATCAAATCTAGGATTCAAGTTCTTTCCATGTCTGGGAAACAGGCGGGATTTATCGGAACCTTTATAAGCATCGTGAAAAATGAAGGAGTACCGGCCTTATATTCTGGACTGAAACCTACCTTGATTCGCGCGTTCCCTGCCAATGGGGCTCTCTTCTTGGCCTATGAATACAGCAGGAAGTTGATGATGAACCAGTTTGAAGCATACTGAAGTGTTGCAGTGAACCTCGATCCAAGTGCAGGCATTTGAGGACTGCAGTTCATCTCAGGGTTTCAAAGAGTACAAGACCAATGTGGAGTTATTTTGATTTCATGCAAATTACTTTTTTTTTTTTTTTTTTGTCTTCCATTCTTCTACCTTAAACTTTATAGAAGAGCCTCTATTTTATAGCGTATAATTTCTGCCCATAATTGTATTGAAATAGAAAAGTTGCTGCTCTTGTCCATGGTGGGACATGCAGGGTAGGTGGGCTGCTGGTCTGAGATATACCTATTCTGGAGGGCTGAGTAGAACTATATCAAGGGCTTTTGCATAAACCTGTATGTGTCCATGCAGTTTAGATGGTTATGAGTTGTGAGTGAAGCACAGTGTAGTTCCATGTTTTATCTCAGATCACATCAGAAAAAAAAAAAAAACCTGAGGTAACCATGTTTCATGAGGATGGTTATAAATGCGTAATCCATTCTAGATGTAGGGTCTCTTTTTTTAAAAAAAATCTGCGTAGCACGTACACAATACTAAGTGGGTACAGTTTTTAAAACGTTTTCCTGTGGTGCTTGAAAACTTAAGGTGTCCTTCTAGATTTTTAAAAAGGAGAAAGTACCCGCATACTGGTGTGGCTTTCACGTTGTCGACTGACGTTTCAGAGGAGGCATGCTGGATTCTCCTAGGATGCTCCTCTGTGGAAACAGTGCCAATCATCTTCCAGGTAGGACCACATTCTGCGCCCTGACATAGGGCTAGGTGTGGCCTGGAGCCTTTGAGAAGCAGCCCAGGGCCGGCTTCTCTTCCCTTCTCTCGCAAGGGACTCCCCTCTGCTGGGCTTGAGCTAGAGGAAGGGGCTGAGGGGACGACGGCGGCGGCCGTGGTGCTCGGTAAAGCTGGTGGCTGACAGCTTCCCTGAGCTGCTTTCTGTCTCTGGGTCCTGGCCTGGGTGGGGTTCCAGGGATTTTATTGGACTCTCTATCCGTTTTGGGCCACGCCCTCCTTTGCCTCCGCCAATCAGAAGCCCTTCCAGGGAGCCGACTGCGGAAGCCCAGAGAGGCCCTGGCTCTGCATCTGGGAATAGGATGCTCCTGGGCGAAGCGCTCTCCTCTCAACCATTCTTAGGACTTGCCCTCTCCGTAGGGGTGTTAGGTGAGCTGGGCTGAATTTTTGTCTCAGGCTCCCTCACTCCTGGTCGGGCTTTTCCAGCATGAGAGCCTTTTGACTTGGGCCTCTGGCCGTCGTGAATTTCAGCGACGTGGTCTCGGGTGTGACTTGATCAATGAAACAAGTCATTTTATTAAACTATGCCGTTTGTCTGCACTACTCACAAACCCTAGTTTTTTGGGTTTCTACAGACGTGGGAGGGTCAGCTATTCTCTGTCCTCTGGTGTAAGGGAGTTGCACCGTCCCGGTCCCAGGACCACCCAGGGCTCTGATAAAAAGGTCTTAATCGGCCTCAGCGGCTGATGTGTTGTTAGTAACAGTCCTCAGCCGTATGTCTGTCCCTGGCGAAACCTCTAGTTTCTGCAAGCTTTTTGTTCTCCCTGAAGCCTCGTGGTGACTCTAGCCACCTGCCAGAAGCCAGGAGGTCAGGAAGGCAGGATGCTCAGCGTTGTGCCCAATGGGTTCGTGTTATGCCTGGTCTTGAAAAGCATTTGCCTTTTCTTGAAAAGCATTTTTCTACCTACCTTTTCTCCATGTTTAAATGGTCAGTAGCTACCGAGTAGTGCTTCATCTAGACAGGCTGGACTGAAGCCAAAATAACAAACGGGACTGGTTCCCCCAGGAAGAGGCTTCCTCCAGAGCCCACTGGCAGTACTACTACCTGTGTTGTCCTGCAAAGATGTAACTGAATTTCTTCAACAGAAACCGTCTGAGGCAAGTTAAGAGTGAATGGGAGTAAGGATTGGGAACTTAAGTCAGAATTGTGTTATTGTTTGTTTCATTCTATTCGCTTAACTCATGGTTCAGTATTTAGGTACAATTTGTACCATTTCAGGTGTGTACTCCAGACAAAAATATAGTAGCTTGAAATACTGTGTTTAAAGAAATTCTTGAGTTCTGTCATTAAATTATTTGCCTAATAGGTGACTATATGATTTAAGTGCATACATTCAAAGAACCAACTGTCAGGAATGCTGGAGTCATGTATGGTGATATTTCAAGGTGGTGGTTTTATTGCAATTAGCATTGTTCTTTGTCAACAAAATTCCTGATGTAAAACAACTACTGATAAAAATCCATGTTATCTGTACACTGCAGTGATGAAACTTGGCCCACAAAAGTTACTTTCCCTCCACCAGGCTGTGGATGTGATGTGATTGATTTGCCAGGATGCCATGCTATTTTTTAAAATAAACTTCTCGATACAAGTTTGGGTAGTTCTATTCCAGGTCAGTAAATTCTTTTTGGCCACACTGCGCAGCTCGTTGGCTTTTAGTTCCCTGACCAGGGATTGAACATGCGTCCCTTGCATTGGAAGCGTGGAGTCTAAACCACTGGACTGCCAGGGAAGTCCCTCCAGGTCAGTAAATCCTATTCAAGAAAACCAATATCGTTCTGATATTCTATAAATTTCTCAAGTTGTTTAACTATTCGCACTGGATTCTAGAAAAGCAGGCCTGCAGGTGGCTGTGAGCAAGTTCTCTTTATGAGCAAAAGCAGTATTAGGTGACCACTCATAGTTGCCAGAAATTTTGATGCACTTTGGAGGATTAGGGAAGAAAAACCCCCAACTGTAATCTCCTCTATTTCAAAACTCAAGATTCTGAAAAATTGGGGTTTCCCAACTTTTGCCAGTAT EMBV3_18814 CCTGGAAGAAAGACTCCTCTACAATCGAATCCATAAGAAAGGTACACCAAAATACGGCAG Gene BVV0102_203780 + 0 NULL GK000008.2:109346698-110409331 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42860 TACTTCGGCTCAGGGCTGGGAGGCCCCACCACGATCTGCCTGTCATCCTTGTTGGAAACA Gene GeneID:531597|REM2:XM_002690511:499_cdna Constitutive 0 NULL GeneID:531597 10 GENE REM2 NULL RAS (RAD and GEM)-like GTP binding 2 EMBV3_28949 CACTGCAGGGCAAGAATGAAGTGGCTGAGATTGATATGGAGTCTTGACAGAAGGAGCTAA Gene GeneID:533577|LOC533577:XM_002689652:44_cdna Constitutive 1 NULL GeneID:533577 8 GENE LOC533577 NULL similar to Chromosome 9 open reading frame 40 EMBV3_08460 GAGGTCGGCGAGGTTGTCAGCTAAACCGGCTCCTGCAAAAGTGGAAACGAAGCCAAAAAA Gene GeneID:100335532|LOC100335532:XM_002696259:35_cdna Constitutive 0 NULL GeneID:100335532 20 GENE LOC100335532 NULL non-histone chromosomal protein HMG-14-like EMBV3_40043 TGAGAGACTAGATGGTGGTTTTGCAGTGGTTGCTGCGGCTTCTGCTTCTCACCGCCTCTT Gene GeneID:510961|LOC510961:XM_002683967:2_cdna Constitutive 0 NULL GeneID:510961 Un GENE LOC510961 NULL hypothetical LOC510961 EMBV3_20863 CGGTCTGCCTAAAAATGGCAGCAGGGGCTTTTACAGCAGGACTGTTGAACTCTGTGGTTC Gene GeneID:785930|LOC785930:XM_002693634:186_cdna Constitutive 0 NULL GeneID:785930 15 GENE LOC785930 NULL similar to Olfactory receptor, family 5, subfamily F, member 1 EMBV3_13368 TCTACATTGTTGGAATCCTGTGCACCTACGCCCTGCAGTTCTACGTCCCTGCGGAAATCA Gene GeneID:509629|SLC36A2:XM_002689312:12_cdna Constitutive 0 NULL GeneID:509629 7 GENE SLC36A2 NULL solute carrier family 36 (proton/amino acid symporter), member 2 EMBV3_39074 AGATACCCCACTATCATAAACAAGAGGGTTTGTGTGCAGATTGCAGCTGGCTCCTGGGTG Gene GeneID:786765|LOC786765:XM_002689886:35_cdna Constitutive 0 NULL GeneID:786765 8 GENE LOC786765 NULL similar to cOR13F4 olfactory receptor family 13 subfamily F-like EMBV3_41651 ATGCATGACGGGAATTGGCCCCGAAGATGGCAAGAAGCCCCTGAAGCAGCCCAAGAACCA Gene GeneID:100297008|LOC100297008:XM_002683608:10_cdna Constitutive 0 NULL GeneID:100297008 2 GENE LOC100297008 NULL hypothetical protein LOC100297008 EMBV3_18087 TCTTCTACCTGGAACACCAGGCTGACCACACACCCCTGGGTCTCATCCTATTAGAGAACT Gene GeneID:614614|LOC614614:XM_002698061:29_cdna Constitutive 0 NULL GeneID:614614 25 GENE LOC614614 NULL similar to predicted protein EMBV3_28407 TGACGTCTCAGTTCAGGATCGTAGTAGATAAGGACATGTGGGTTCCGGATATAGCTAAGG Gene BVV0102_083361 + 0 NULL GK000004.2:50799305-51035770 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12463 CAAAGAGTATGGGGAAGCCTTTATATGGACAGCCTATTCAAATGGGGCAGTTGATGCTGG Gene GeneID:517970|ZNF283:XM_002695083:510_cdna Constitutive 0 NULL GeneID:517970 18 GENE ZNF283 NULL zinc finger protein 283 EMBV3_33704 CAACTTCGAGTTCTCCACCGAGACGCACGAGGAGCTGCTGTACAACAAGGAGAAGCTGCT Gene GeneID:287027|NDUFS8:NM_174818:482_cdna Constitutive 1 NULL GeneID:287027 29 GENE NDUFS8 MGC134156 NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) EMBV3_35674 ACCTGAACTGCCTCCCTGTGTGAATCCTGGCAATCCGGTGTTTTCATGTATGTTGGATCC Gene GeneID:100297185|LOC100297185:XM_002690893:33_cdna Constitutive 0 NULL GeneID:100297185 10 GENE LOC100297185 NULL hypothetical protein LOC100297185 EMBV3_25935 TCCTGGACAGCATAAGCATCATTGACACGCCGGGGATCCTGTCTGGAGAGAAGCAGCGCA Gene GeneID:100336747|LOC100336747:XM_002699386:363_cdna Constitutive 0 NULL GeneID:100336747 29 GENE LOC100336747 NULL EH-domain containing 1-like EMBV3_09881 GCAGACAGAACCCCAGGAAGATGGTTGGTATGACTGCCAGAGGGAAACACATCCAAGTTT Gene GeneID:528433|DDX20:NM_001102118:134_cdna Constitutive 0 NULL GeneID:528433 3 GENE DDX20 MGC166141 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 EMBV3_34341 AGAAGGGCTGCCTAACCCCCAGGATACGCTGGAAGGAGGATAACGCAGAAACTTGCATTT Gene BVV0102_162532 + 0 NULL GK000021.2:19953517-19984961 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122935 1 XLOC_074489 NonCoding TCONS_00122935 XLOC_074489 NonCoding NonCoding - 21:19980544-19981488 - TSS91694 944 1 TCONS_00122935_5 123 0.163135593220339 1 0 0 0 0 0 0 0 0 0 0 1.74342902845358e-05 2.42498503820906e-06 0.000124997311847064 0.00018236959623444 6.97626158483606e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 8.64872619505121e-05 0 0 XR_248163.1 LOC101929743 PREDICTED: Homo sapiens uncharacterized LOC101929743 (LOC101929743), misc_RNA. 1e-11 75.2 79.55 0.0921610169491525 0 noncoding 0 0 0 0 0.0245194465016055 0.811947319800851 0.0439859366263041 0.387115948763554 TTATTTAATTAATTATGTTTTTTTTTTTTTTAATAAAGATAAAAAAGGAGAGATGGGCCTAGGCTGGACTGGATTTCAGCCCTTACTACAGGGTCAGTGTTTTTTCATGGCATGCACCATGCCAGCTCCCCTGTTCAAGAGACAGAAATCCCAGATTTCTGTGTGAACCTTTTCAATCCCGAAGACAAGTACTTCACATTTTTTAAAATTCTGAGAGCCCAGCAAACACTTCTGTGCCCCCATTTAGACCCCTGGCCACCAGTTTGCGAACCCTAGATCCGTGGCTATTTTCTCGTGGGTTTGGCTGTTTTCCGGACCAATAAGGTAAGCTCGGAGCCTCGGTTTACCCACGTACACAGGCGGGGATTGGGGCAGATGGTTCCGTGCGGGCGCTGCCTGGGTGTACTGGCTCGGGCACAGCGCATCCTCGAAGAGTGGATACAAAGAGTAAGCGTTTGCATCTTTGAATTCAGGGAGAAGTAGTCTCTGTGTGCGGTCAGGTGACCCGGGTCTGATCTGCTCAGGCACGGGCGATTTAGGGGAAGTGAAGCTATAGGAGATGCCCTTGTGGAAATGCAAGTTTCTGCGTTATCCTCCTTCCAGCGTATCCTGGGGGTTAGGCAGCCCTTCTCCTGCCCTCACCCGGGGCCAGGACACAGAGGTGGACTCGAGTCTAGCTCTAGTGCCTGTCCTGTTGGGGAAAAGTTGGCTTGGAACCCTCCTCTAGCATTCAGCCATACAGGGGCTTGGAATCCCGGAGCCCAGTCGCTCTACAGGAGAGAGAAAAGGAGAGAGCTGCTGGCCCGCGACCTCCGCGAGCTGTTGCCATGGCCACAGCAGACTTTTGCTGTGAAGTGCGGTGACCACACCCCCAACTTCCCTTCTCCTCTCGCCTTCTGGATGACGTCATGGGCGTCCTCGGCGCTGACTGGCTACCTGTGGGT TCONS_00118747 . 5' 3474 TCONS_00118747 . 5' 3474 EMBV3_05625 TGCCACAAGTAGTTCTCACCACTTTAAACCCTTGGTCTTGAAATGTACATAGGTATGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15524 CCCTGCTCTCAGCTCTGTTTCAGTCAGCCTTTTCAGAAAACTGAGAGAGATGGTCTCGAG Gene BVV0102_021116 + 0 NULL GK000015.2:80753624-80793462 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144753 TCONS_00144751 TCONS_00146507 TCONS_00144749 TCONS_00144752 TCONS_00144755 2 XLOC_088638 XLOC_089121 Coding TCONS_00146507 XLOC_089121 Coding Coding PALB2 25:21488393-21540630 j TSS109515 4408 1 TCONS_00146507_3 279 5 0.915709472394517 0.0265296709156238 0.0208825325325903 0.0239000461952179 0.0182433179605097 0.0194838425261923 0.00840122337657188 0.0136168767203929 0.0136043014555695 0.017654872382674 0.00195535701020909 0.00135117482576448 0.000247974347647779 0.00302205030446454 0.0088226974733404 0.00335593622662329 0.000829329088499553 8.43043387012458e-105 0.000858587701425699 0.023732519118141 0.0278648405891184 0.0130898243260007 0.000721934774055564 1.21257861542827e-05 0.000394109967353751 0.0319993259307085 0.0272988924937608 0.0199534476301224 0.000397418152494169 0.000395192884966592 0.000253197975301633 NM_001205615.1 PALB2 Bos taurus partner and localizer of BRCA2 (PALB2), mRNA. 0.0 2271 99.92 0.286070780399274 NM_019116.2 UBFD1 Homo sapiens ubiquitin family domain containing 1 (UBFD1), mRNA. 0.0 1568 75.05 0.519056261343013 TCONS_00146507_3 sp|Q86YC2|PALB2_HUMAN PALB2_HUMAN Partner and localizer of BRCA2; 4e-88 287 64.03 0.899641577060932 0 noncoding 0 0 1 1 0.462055420108 0.335981135368395 -0.146673212706586 0.0224642960287003 GATGCGGGAAAGTTGAAAGAAAAATTAGCATTCCTGAAAAGGGAATACACCAAGACATTGGCCCGCCTTCAACGTGCCCAAAGAGCCGAGAAGTTTAAAAATTCTCTTAGGAGAACAGTGGAAGAACAAGACTCCTCACTCCAGCAGGAAGTTTCAACACAGCTAACCCACACAGAACCTAAAAATACAGTATCTCCTCGTGACACGTTGCAAATCAACACCCATGTCGATGAAGAAACTGGAGAAAAGACACCCAGCTCACTTGACATTAAGCCTGAGTTGTTTAGCTCTGGACGTGTCTCAGTGGAAGGATCACGCATACAAGGATCAGATGATAATCAGGAACATTTTCCTTTCAGGGTCAATGGCCCTGATGCTAAGAAAAGGCAGAATAAGCTGCTGGGGAGAAGAAAGAAAGAGGAGAGAACATATATTTCACAGGAGAGAGAATCTCTCTCTGACATTGATTCGCTCATACTCTCTGGAAAAAGACTAAAGGAACAGGAAAAAATGAATAGAGAAAATCCTAGAACACCTGTAACTGAACTAAGAACTTACCCCCTTTCAAGTCCTAAATGTGCCATTCCAAATTCTCCAGCACCAGTTACAGAAACTAATGTAGGGAGTGTATTAATTTTACCAAGCACCAAACCACAGAGAGATGTTGATGCCCTCCTTAGAGGAAATGATTTCCCCAGGGCGACTACTCTTCCTCTGCCTACACCTTCAAATAGCAGTAACAGTCAGCGCCTCGAACACAAGTGTCCTAAAAGTAACTGTGAACTTACTACTCACAGCTTAAGAAACATTAGCTCTGCTTCACCTGTAAACTTAGAGGTACAGAAGAAAAAAATTACTGTCTCTACAGATAACCCAGAGGTAAACAAAGCTGGAAGTACAAGTGGCCAGGCAGCTAGAAGTCCTAACTTAGAGGCAGATAATTCATGTTTTATAAATGAACTCACTTGTGATAACTTAGTGGAAAATGAAAACCAAAACTTAAAAGAACAAAATCACACAGAGATGTCTCTTAAATCTCCCAATGATGCTCTCGGTGGTAGAAATGAAAGTCTTCTGGAAAAGGAAGTTCTAAGTCAGTCTAAGAATCTTAGCCTGGAAGTAATTTCTCCTGTTTCTACAGAAGATCAAATACATTCTTGCACAGTGCTTGAAGGCCTTCTCTTTCCTGCAGAATATTACGTTAGGACAACACGGCGCATGTCAGGTTGCCAGAGGAAAGTAGCACTGGAGGCTGTAATTCAGAGTCTCGTTAGGAAAGAAAAAGAGATTCTTAGAAATTCAGAAAGCAGTAGAACCACCCAGCCTGGCAGGTCAACTGACCAGATGTGACACACACTGGAGGGCTCCTGACCACCTGCGACTTCAGAAAGGCCACCAGGCCCCGCGAAGAAGGGAACAGGTGCCAGTCCTAACTGGAGATGACTTGATCACAAAGCCTGAAGACAAAAGGACTATCCTTCCCAAGACAACAGGCCAGGAGAGAAAGAAGCGCCCTCAGAGGACAGGGTGGAAAGCAAGCCACCCTTGGCACACAGGGTCCTGCCTCTGGCAAAGAGGGCGGGCCAAGTGTGAGTGCCCGGGACCGTTCCTCCAGGCACCTGGTGAAAGGGAGAGGAAGAAGCAAGGCAGCCCCTTCCAGCTGAGATCCAGCAACTGAGTGGCGAAGGGCGTCTCCCTGGCCCTCGTCATGGAAAGCAGGAGCCTACAGAGGCCTCACCTGGCCCACCATGTCTGCAATACAGCAAAGTGCACCCTTAGCTCAGCTTGACTTTCTTTTTAAAAAGAGCTGACGCTACTTGCAAAAGGCCCATCATCGATTAAAACAATACCAAATAGTTGAATACTGAATACCAAAGAGTCGGAGCAAGTCTCGAGACCATCTCTCTCAGTTTTCTGAAAAGGCTGACTGAAACAGAGCTGAGAGCAGGGATACCTCGTCACTAGTCTGCCAAGTGGCGGAGGGGAGGGAAGGAAAGGCTTGTTGTCCTGCGAAAGGGCTGCCAGCTCCACGAGAGAAGGCAGCCTCACCCCCGTCCACCCTCAGAGCCCCGCGAGGGGTCCTGCCCCCTCCCCAGCGAGGACTCCGCGTGGAGAGAAGCCTGAGGGAGAATGAACACTGTGATGCTACTGAAGGGGAAGGAGTGTCTGAATTTGCTAACACAGATTTAGTCAGTACATCCTGGACCATAAGAAGATGACGACGAGCCCGCTCACGGGCCAAGTGACAGACTAGTGAGCGCTGCTGGGACCCAGGCGCGGCTCCTCTGCTCGCCAGGGCTTCCTGCAAGGGCTCCACACGGATGGGGCAGCCAGAGCCCAAGATCGGGCCAGCACTGTTCGTGGGCTCTGGAAAGCAACGCTCGAACAGGTCCGTACGAAAAGATGTCATTTACAGTATTTATATAGAAGATCTCCAAGTAAGGAAAAAAGCACCATTTTTACTTCAAATAAAAAGGCTCACACAGGCTTTGGTCCTGTTTTGAGACGACACCGGCCTGAGCGAGAAGCGGTTTGGCCCTTGGGGAGCAGGGAGTCGGTACGCACGCTGTCACTGGGAGGAAGGGGCATCAGGTGGCAGGGGTGGGCGGGGGGCAGCCGCCCGAGCAGGGCGAAGGGGGAACCTGGTGGGAAGGGCCTTGGGGAGCAGCCCCACAAAACGGGGACAGGATGCCTGCTTCAAGAGCGGGCGTGTGGCACTGTCTGGACAAGCCTCTGGGACAGGCAGGCTGGCCAACAGAAAGAGCAGCATTCAAACCGCGCCGCCACTCTGTGAGCACGCGAGGCCTGTCAACTGCAGAGCAAGGCTTCCACGAGCAGCAAAGACATGCTCTTTCCTCCAAGGACTGTGGGCTGACAAGGACAGAAGAGCTACAGGTACTGCGCCTTTTGCAAGGGGTGGAAAACAGGCCATCTCCTGGATGCTACACTTCCCAGACGAACTTGTACCCCCCAGAAAAGCAAGAGGAGTTTCCTGCCTAGATCCGTAACCTGGCATGGACAACACCACGAAAAGCAAGAGTTGGTCTGGATGGGCTGGATTCTTGAACTACGGCTTAGAAGGGGAAGGGCGCGGACGATCACCATGAACTGGCTCACAAGGAATAGTCATCTTAGGCGAACACATGCTAATACGTTTCACAGAAAGAAGGCTAACAGTCTAGAATCCAGAATGTGACATTTGGGACATCTCTTGCCAAACCTTACTATGAGGGCCTGCACCAGTGAGAGGAGAATCGCAAAGACAGCAGCAGAGCAACAGCAAACAGCACAAAGGGTATCATTCACCAAGAGACCGTCCCTCGTTCCAGAGTCAACCAAACCACTGGGAGACGACAGAACTTCACGTGGACAGAGGACGGTAAGGGCTAAACCCGGAAGAGGGAGAGCTAATCACAAAAGCTGTTTATCCCATTTTCGATGTTGAAATACATCGGCCAACCCACTAGGTCAGATGACTTCTTCTTGAGAAAGGCAGCATCTCTAAACCTGGGATGAAGGACACTTGAACGTAATGCATGAGCAGAAGGACCAGATGCAGACACGTCACTGAAAGAATCATTGGACTGCTGAAGGGTTTCTCAAAACTTCTAAAGAAAGGAGGAAGGATCTGGGTCTGTGGCTGTATGGCTGTATAACTGGCTTCCACCTGGCTCCTCTCAGAGGGGCCTCTGTCGGCACACCCATGCCAGGCTGGGCCTCAAAGCCCAATCAGCGAGGGCTGTAGGCAACTGTCAAAGCGGCAGTGCCATCTCCCCAGAGATCGGGGCCCAAAGGGCAAGACGGTCAGACCGGAGTCGCTGGGACACACTCCGCTGCTCAGCACACACCAGAGCCCTGTGAGCGCCCCGACCAGACCCCTGGCTCTTCCTCTCCTGCCATGCATTCACGAGCAGCAGCGTGGCGGGAGGGAGGCCAGGCAAGGAAGTGGTGATGAGGTACAAAAGGAGGAACTGACATCTTTGGGTTTTCAGAAACAAAAATTCCCATCTAGGAAGTGAGAAAATAAGAAGGGAAAGAATTCATTCTGAACCAGTGGACAGAGAAATATGGCTTACTAACCCCCACATTTTGCATACAATTTTATATGAAAAAGGAAAAAAAAAAACCCACCCCCAACTCATCACAATGCAGTCCAAATGTTTGCAACCAAAGAGTTATGAAAATATTTCAGGTGAAATCACTTAAAAACAAACAACAACCAAAGAATCAGAAAGCTTTTGATCATTCCTTTCTAAACACAATTGGTAGATCTACTCTCAAACACACTTAAGAGTATTCCACACAACATGTTCAGAATTCAGATTTATTGATTTCCACCGTATTGACTTTTAAAAATGGTATGAAGCTGACTGCAAGAAAGGGAACCGGTGATTTTAAGTTAAAATTA EMBV3_27775 AAATTGTCTGTGTATATGTGGGAATCCTCACACCAAGGAAAGAGGCCAAGGTCCCCCTGC Gene BVV0102_081372 + 0 NULL GK000007.2:82836481-82859302 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17204 TCCCACATCAGACAATGCGCTTGGGGCTCCCCGCTCTGGGTCTCTCCCGAGTCTTAATAA Gene GeneID:613623|LOC613623:NM_001101223:40_cdna Constitutive 0 NULL GeneID:613623 29 GENE LOC613623 NULL hypothetical LOC613623 EMBV3_04385 GTGAAATCTGCTGTGCAGAATTGAAGGGAATTATATACCCATTGAACTGGGCTTCATTCC Gene BVT0101_014182 + 0 NULL GK000010.2:46768549-46788005 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017151 TCONS_00017152 TCONS_00017156 TCONS_00017153 TCONS_00017154 TCONS_00017155 1 XLOC_008977 Coding TCONS_00017156 XLOC_008977 Coding Coding APH1B 10:46784938-46829055 j TSS11786 4275 1 TCONS_00017156_1 257 0.016374269005848 6 0.903232387342461 0.000172826451571044 0.0024355524215899 0.00389551036573736 0.00254097161508865 0.00167111837070282 0.00105316799075357 0.00239180680895115 0.00370477850494307 0.00336440926074848 0.000234113772339801 2.74203642312781e-08 1.23281940930957e-05 3.88256784059176e-18 0.00138255071018687 0.000228504081203919 0.000188015935957198 4.14934509679064e-13 2.71057832369905e-13 0.00357148115823393 0.00336395916726725 9.99469345088725e-05 1.32238335033851e-13 0.000284834965527315 0.000507453340786827 0.000969407346549057 0.000193055465154667 0.00192942857063116 4.00766441438392e-05 0.000104362632691656 1.29645126549719e-62 XM_005211694.1 APH1B PREDICTED: Bos taurus anterior pharynx defective 1 homolog B (C. elegans) (APH1B), transcript variant X1, mRNA. 0.0 7546 100.00 0.978479532163743 NM_031301.3 APH1B Homo sapiens APH1B gamma secretase subunit (APH1B), transcript 0.0 2560 74.18 0.955321637426901 TCONS_00017156_1 sp|Q8WW43|APH1B_HUMAN APH1B_HUMAN Gamma-secretase subunit APH-1B; 1e-147 418 83.27 0.996108949416342 1 coding 0 0 0 0 -0.241563522337065 0.0739530985650727 0.00866359837698755 0.903191520945226 GCCCTGCTCTCGCCCCGCCTCCAGTCCCTGGTCCTGCTCCGCCCTCGTCCCGGTGCACAGCTGGTTCGGCGCTCTGCGCCCCAGGGTCCAGGCCAGGCCCCCCGGCCGGCTTCTGCGGTCGCCATGACGGCGGCCGTGTTCTTCGGCTGCGCCTTCATTGCCTTCGGGCCTGCGCTTGCCCTCTACATCTTCACCATCGTCACCGAGCCGTTACGCATCATCTTTCTCATCATTGGAGCTTTCTTCTGGTTGGTGTCTCTGCTGTTTTCTTCCCTCATTTGGTTCACGACAGCAACCCTTATTGGTAACAAAGATGAACCAAGAGAGAAATATCTGCTGATATTTGGAGTGTTAATCTCAGTCCTTATCCAAGAAATGTTCCGGTTTGCATATTATAAACTTTTAAAAAAAGCCAGTGAGGGTTTGAAGACTATAAACCCATATGAGAAAGCACCCTCTATGAGATTGCTGGCTTATGTTTCTGGCCTGGGCTTTGGAATCATGAGTGGCGTATTTTCCTTTGTAAATACCCTGTCTGACTCCTTGGGACCAGGCACAGTGGGCATTCATGGAGACCCTCCCCAGTTCTTCCTATATTCAGCTTTCATGACACTGGTGATCACGCTGCTGCACGTGTTCTGGGGCATCGTGTTTTTCGATGGCTGTGAGAAGAAGAAGTGGTATACCCTTCTTGTAGTTCTTCTCTCCCATCTGCTGGTGTCAGCCCTGACCTTAATCAGTCCTCATTACGGATTAAATCTGGTGTTGGCATATATCATCATGGTGCTCATGGGCGTCTGGGCCTTCTTTGTTTCTGGAGGCAGCTGCCGAAGCCTGAAACTCTGCCTGCTCTGCCAAGACAAGGACTTCCTCCTCTTCAACCAGCGTGCCAGATAACCTCCGAGAACCAGCACTTCTCAAACAGTAAGCTGCCTCATTAGAGGAAGCACAACTGTGCCTTTTTCTAAACATCCCTTTTCCTGGTGGAATTTAGAAGAAACCAAACTATTTAGACACGATTCGGCTTTCATGCAACATCTTTCTGAAAGGGATACATCTCTGGTGCAGCCGGCGCATGTTAGAACTTCCTGGGGAAACAAAGAATACTGATCTCTGGGCTGAGCACTTGGTAATTCTTTAAAGTTTTCTAGATGACACTGATGCACAGCCAGGTTGAGAACCATTGCTGCCCAAATAGGAACTTCCTGAGAACACTGTAGGTGAATAAAAATCAGGTGTTTTGCTGTCTCTTAACTCAGCTTGCACTGAGCGAGTATCTGAATATAAATCCTGGTTAGCCTGTGTCTTTCGAGTTCTGAAGTCACAGAAGGCTAAAGGGCTATCATCTCTATGAACTGTTTTCATGTACTTCACTGGTACCCTGTTTTATGAGAACGTGGAGGCTGTGCTTCAAATACAATAATACATTGCACTGACACTATGATCATTTAGCCAAAGTAAGCTGTGACGAATAGACTGTATTTTTCTCTACTGTTTCCAATCTCGATTTTGCTTTTTTGAAGCATCACATTGTTTTAGAGCATAGGTTCCATTTCTTTAACTAAAACCCAATTTCCAACTTCCTGGGAAGATGATATAAAACCAAGAATTTTGTGCAACTTCTGTAGGTCCTGGGCTTAAGGCTCTTCATGGGCTCTGCCCCGGGGCAGTGTTTACCAGCTGAGTGCTCACTGCTGGACTAGTTGACCTGAAGTCGTTTGTTCTATCTCTGAGCAGCTCTGCAGGTTGCTGAGTGATGTACCCTGGGACAGGCTTCACTGGAGCTGGCAGAAGTTTACTAAAAGCAGGAGGAGAGCAAGCCAGTAGAGCAGTGTTGACCCTTCTAATTTGCTCCTGTGATACTAACTGGCACATTCCCCCCAAATAGTGTAGTGGAAAATTAGGAATATGTCTTAAATTTGCCAAATTCATGCTTTTAACATAGTCCATGTACTCTTTAGATCTTGTAAATGTCTCTGGATTATTGTTGGCAGATAGGGCATTCCCTTTATAGGCGTATCTAAGATGTTTGTTCAGCTTCCAAACGACTCTTTTTTGGTTTGCTCTATAAAGAGGAATTGTGCCTTTACTAAGCTAGAAGTTGTTCCCTTTTGATGACTTTTAGGGAGCTGTTGGTATGAAATGGAAATTCCGTACACATTAAAGAGAGAACCTCAGTGAATCCCATATGTGCAATAGAACAGCCAAAAGAAATAGAAGCAGGAAATGAAAGGGTTCACCAGTGAGGTGACAGATGGGAGAATTTGACAAGAATTTAACAGATATGTTTAAAATGGAAATGCAGCCAGTATTTTGGGGTAGTCACACATCATTCTAAGAACCAGAACCTTACACGTGAACTAGATCTTTATCAGTGAAATCCCCTCTTATGTTTAAATTATTTGAATTTTTCAATCTGGGGATTCAGGAGCAGTAGGATTTCTGGCAAAACTATAAACAGTTTCGTAAGCAATTATAGTTATTCCCCTAAAGTGTATTTCAGCACTGACACCATTGTTTTTGCTGGGGTTTGCAATTTTCCACATTTATACAAGATTTTCTTTAGACTAGGTGAGTTATGGAAGAGTCAAGGACATAGAGACTGAATAGTGAAATCTGCTGTGCAGAATTGAAGGGAATTATATACCCATTGAACTGGGCTTCATTCCTATTGGAACATGGTGTTCTTTGATGAACAGAATAAGAAAAAGATACAGTTGGTTATGACGGTTGATTTACAAATCTCTTGAATGGATAACCTGGTAAAATATTTGCTGATCTTTAAAGTGTATAAATATCTGAGAATATTGATATTACTCATACTTGAGCTCTGAGGATGTCTTCTGTGCATTAATAGTTCAATATTAAGAATCTGGGATATTGTGAAATCTCATTTATAAATGCATCTCAGGCAGGAAGAAAATTTTCTTTGATGGTCAGACTGTCTTTTTAATTCAGGAAATTATTTAGTAATTATTTAGTAATCCATGCTTACCTATGAATAAAGGAATTTGGTAGCTCCTTATTTCTCTTGTGAGTGTTGCCATAGTCAGCTTAGGCACAGTTATTGCAAATAGCCTTGCTCTGCCTGATGCCAAGGAAGCCCAGTGGGAGAGCAGCCTTCCTCTGTTGTATGTATATATTGAGATGTGCTTTCTTTTTATCTTTTCTCTTTTTTTGCATTTGTTACCTCTAAGGAACTTTCTGAGCCCTAATAGTGTTTGGAGAGGAGGCGATGGTGGTAATCTTGTATGTTCTCCTCCACACGTAGCTTTCTCAGTTTGGAGGGAAGTGAGGCTGTAGTTAAAGTTGACCATGGAATGTGAATGTTGTTGCAGCACTTGACTCTGTTGCCGTGTGAATCATTGAGATCGCTTATGGTTCTCTAATAATTTTTTTTTTTTTAACTCATTTGAGTTAGTGGTTGTAACTGGAGACGTTTTGTTACCCTTGATCGTGGCCTGTGTGACTGGCAATAGAATAGTAGCAGCCTCTTTGCAAACCTTAGTGAAAACATGGCTGAAAGGAATGAATGGTATCTGCAGATTGTATAGAAGATGGCTTTTGTTCCCAACGTTAGTATTTTTCTTCTCAAGCACATTTCATTTTTTCCTGGGAGTGGCAGTTACGGGTCAAAAATGCTAGGTATTCTTATTGCATAGAGTTGGTGCAGGACAAGCAGTCATGATGGAAGTGTCTTCTTACCTGATCCTCTTCGCTGGCCTCACACTAGCCCTAAGACATGGATTAATGGTCAGAGTGGGCCTGAGGGCTCCAGAGAAGCCAGAATGGCAGCTTGTCTCAGGTGTCAGCAGCCGGCTTCTTGGGAAGAACTCCTTGAGAGTGTCAGCTTTTTGCTGACTTCGTTTTCCTAAGGCCCAACCATTCCCAACTCCAGGTAGACGGCTGTCACAACAAAAAAGTTTCAGAGTTCTTCTCTTAGAGCACTTTGTATATGATTGCAGTGTTTACATTTCTGATTTAATATAAGACTTTGCTTCATCCCATTAACTTTTAGTGTTTAGAGGGCTGGGCACTGTCTCTGTGTTCTATATGTATCATTTTATATAAGTTATACTGTTACGTTGTATGTACTTGCAGTATCAGACCTTACTTCAGTACACAATGCAATAGACTCTTTCCAGACTTGTATTTTTCAGTAAACAATAAAAAGATTGTCACGACTTGTTTCTCATGTTTCCTCTTCTTTGGAATAGTGTATCCTTCAGTGTCTGTTACTACAATTTTTGCCTCTTATAAAATTTGATTGTATGT EMBV3_23872 CCTGAAGGGCAGTGGCAACATCGAGCAGAGATACAGATTGCCCGAAAACTCCAGTGCATT Gene GeneID:541141|BMF:NM_001077485:184_cdna Constitutive 0 NULL GeneID:541141 10 GENE BMF NULL Bcl2 modifying factor EMBV3_19064 AAGACACACGAACGCATGAACCTCTCTGTGGAGTTCTGGCTGGAGAAAGATGAGTTTGGC Gene GeneID:516692|C13H20ORF71:NM_001040535:1102_cdna Constitutive 0 NULL GeneID:516692 13 GENE C13H20ORF71 MGC133737 chromosome 20 open reading frame 71 ortholog EMBV3_31331 CCTGAACAGAAGTCATTACATTAGAAGTATTATGGTAACACGTCATTCTTCCTTCAACAG Gene GeneID:515366|PGM2L1:NM_001098984:7_cdna Constitutive 0 NULL GeneID:515366 15 GENE PGM2L1 MGC159809 phosphoglucomutase 2-like 1 EMBV3_09603 GAATAAGTCCTGTTTTGCACATAGAAAGTTGCAGGTCTAGTTGTCCTGTGGTTTCCTGTT Gene GeneID:541246|KIF3A:XM_002688960:107_cdna UTR3_Alt 2 NULL GeneID:541246 7 GENE KIF3A NULL kinesin family member 3A EMBV3_42701 GTCATTCTGGGTCACTCCTGAGTCGAGTTTCCCCTGATTGTCATGGAGTTACTAACAAGG Gene BVV0102_260427 + 0 NULL GK000005.2:35158164-35174129 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31019 TTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAGCATATGTAGGGG Gene BVT0102_433637 + 1 EMBV3_31298 GK000002.2:19468284-19659539 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00208613 TCONS_00088086 TCONS_00252006 TCONS_00238893 TCONS_00244651 TCONS_00239411 TCONS_00162783 TCONS_00214738 TCONS_00190335 TCONS_00078532 TCONS_00166330 TCONS_00040697 TCONS_00161836 TCONS_00238308 TCONS_00254922 TCONS_00055678 TCONS_00251853 TCONS_00160965 TCONS_00129726 TCONS_00187806 TCONS_00152890 TCONS_00031280 TCONS_00070841 TCONS_00207978 TCONS_00135528 TCONS_00197486 TCONS_00091329 TCONS_00253888 TCONS_00189889 TCONS_00177994 TCONS_00210178 TCONS_00017462 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00244653 TCONS_00088289 TCONS_00049393 TCONS_00244654 TCONS_00056147 TCONS_00222057 TCONS_00021194 TCONS_00089425 TCONS_00116799 TCONS_00187583 TCONS_00019991 TCONS_00040834 TCONS_00206862 TCONS_00189806 TCONS_00152647 TCONS_00198434 TCONS_00148253 TCONS_00019197 TCONS_00125002 TCONS_00072406 TCONS_00019962 TCONS_00089139 TCONS_00040896 TCONS_00239410 TCONS_00175881 59 XLOC_142855 XLOC_127126 XLOC_052873 XLOC_154947 XLOC_145559 XLOC_150512 XLOC_146077 XLOC_099664 XLOC_130757 XLOC_116370 XLOC_047420 XLOC_101168 XLOC_024513 XLOC_098721 XLOC_144975 XLOC_157854 XLOC_033486 XLOC_154794 XLOC_097858 XLOC_078439 XLOC_113849 XLOC_092655 XLOC_017528 XLOC_042618 XLOC_126492 XLOC_081751 XLOC_119147 XLOC_056104 XLOC_156826 XLOC_115926 XLOC_107767 XLOC_128688 XLOC_009039 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_053076 XLOC_029524 XLOC_033950 XLOC_135366 XLOC_011867 XLOC_054210 XLOC_070965 XLOC_113628 XLOC_010669 XLOC_024648 XLOC_125382 XLOC_115843 XLOC_092412 XLOC_120088 XLOC_090135 XLOC_009877 XLOC_076545 XLOC_044175 XLOC_010640 XLOC_053925 XLOC_024710 XLOC_146076 XLOC_105660 Coding TCONS_00222057 XLOC_135366 Coding Coding - 7:70682995-70686837 - TSS166055 3842 2 TCONS_00222057_5 115 0.997917751171265 1 0 5.05901659931964e-07 4.79493141964255e-06 0 0 5.71135386159485e-07 1.33005749818789e-07 0 1.71054331302813e-07 1.30064629441795e-06 1.07092175724304e-06 1.48958039000441e-07 4.13638474427097e-06 0 2.44871816558218e-07 1.59623789052634e-07 0.00332700385437757 0.000192296171611 0.00859026605852141 1.86645827677117e-06 1.07770000193695e-05 6.58452760786576e-07 0.000464821333825734 0.000262264095623234 0.000504714169171867 5.63546402276529e-06 1.83380325625921e-06 1.6944788577739e-06 4.58341979923324e-06 6.31781897174857e-06 2.73853284638068e-06 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-114 417 93.48 0.0715773034877668 TCONS_00222057_9 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 2e-22 90.9 45.26 0.92156862745098 1 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 CCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGAGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGGATGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCCTGGGGTCGCAAAGAGTTGGACACACTGAGCGACTGAACTGAACTGAACTGAAGACATCACCAGACCCACTCACAGAACAAAGGACTGAGCAGAACTAGCCAGCTGTGGATGGGCCCATCCCCCACCGGAGACAAGCAGGGGAGGGCAGCCAGAGCCGGAAGGGGGCAATCTCGACCTCAGAGAGGCATCCTCTACCAAACTGCAAGCAGGCTTCACTGCTAACCAAGACTTCTTGGGATTCTGGATGGTCAATCCACTGGGAGGATCACAACCAGAGATCAGCCTCCCAGAAGAGACACACAGATCACCTGAGAAGGCGCGGCCGCTGTACACCCAGAACACCGAGCGCCGGACGGGGAGGCCATAAGACACAGCCTCCAACAGGGGGTGGGGGACTGTACTCACCAAACACCTGGTCACCTGAGCTGCTCGGACCTGGGAAGGGCACAAAATGCAGGCCCAACCAAGTCTGAGCCTTTGTGGACTACCCGAGAGCCTGAACCTGAGCGGCTTAGACCTGGGCAGTGCATGCAACCCAGGGCCTGCCACAGACAGTTCCCCGCAGAGCAACCTAGAGCCTGAGCAGTGTAGACTGGGAAAGCACACACGCCGTGAGCAGGGGCAAACCTGGTGTGGCCGAGACACTGCGAGCACTCCCCACACATGCCAGTGATATTTGTTTGCAGTGTTCCTCCCTCCCCACAGCACGATTGAACAAGTGAGCCTAAGAAAAGTGACCTCCACCAGCCCCTTGTGTCAGGGCGGAAATTAGACACTGAAGAGACCAGCAAACAGAAGAAGCTAAAATAAACAGAAGGAACCGCTTTGGAAGTGAGAGGTGCAATAGATTAAAACCCTGTAGTTAACACCGACTACATAGGAAGGGGCCTATAGATCTTGAAGAACTATAAGCCAGAGCGAGGAACTATCTGAAAATGAACTGCCCCAAACTGTCTGCAACAGCTCCAGAGAAAGTCCTAGATATATTTTTTACTATTATCATTTTATAAATTTTCATAAAATTTTTTATATTTTTAAGTCCTATATTACTCCTTTAATTTTTATTTTTATAACCTACTACTACTACTACTCAGTCGCTTCAGTCATGTCCGATTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATTGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTATAACCTACTATTACCTTGCAAAAAAAAAAAAAAAAAAAAAAGACCCTATTTTTAAAGCAAACTTCATATATATCTATATATTTTTTATAATTTTGTGACTTTGTTTTGTTTTTTTTAATATTGTATTTTTGAGAATCTAACCTCTACTCTAGATTTTTAATCTTTGCTTTTTGGTATTTGTTATCAATTTTGTACATTTAAGAACCCAATCTTCAGTACCCATTTTTACTTGGGAGTGAGATTACTGGCCTGATTGCTGTCTCCCCCTTTTGACTCTTCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCCTTCTCTTCTCTACCCAACTCTATGAATCTCTTTGTGTGTTCCAGGCTGTGGAGAACACTTAGGGAACTGATGACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCGCCTATTATCCTCCTGGCTACCTCTGTCTCTCTCCTTTTGATTCCACCTATTATCCTTCTGACTACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCATGAACATCTCTGAGGGATCCAGACTGTGGAGAACACATAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCCCTTTTGATTCCCACTCTTCTCCAAACCCACTGACATCTCAAAACTCACTACTGGACACTTCATTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAGCACTGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCCATCCAACCCCACCCACAGTGAGGAACCTCCAAAATAAAAAGGAACCACAAACTGCCAGAATATGGAAAGGCCACCCCAAACACAGCATTATAAACAAGATGAAATGGCAGAAAAATACTCATCAGGTAAAGGAACAGGATAAATGCCCATCAAACTAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAAATGACCCAAAATCTTGAAAACAAAACGGAGTCACAGATAAGTAGCCTGGAGACAAGGATTGGGAATATGCAACAAATGTTGAACAAGGACCTAGAAGAAATAAAAGAGACAATATATAATGAATAATGCAATAAATGAGATCAAAACCCTCTGGAGGGAACCAACAGTAGAATAATGGAAGCAGAAGATAGGATAAATGAGGTAGAAGGAGTGTTAGAAATAAATGAAACAGAGAGGAAAAAAGAATTAAAAGAAATGAGGACAAACTCAGAGACCTCTGGGACAATGTTAAACAACCCAACATTCGAATCATAGGAGTCCCAGAAGAAGAAGACAAACAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAGTCACCCAAGTCCAAGAAACCCAGAGAGTCCTAAACAGGGTAAACCCAAAGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAGTATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGAAGGGAATGGCAGGACATACTTAAAGTGATGAAAAAGGAAAAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCACTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAGAAAGGGTGTATAAACTCAAACCCAAAACAACAAAGTAAACGGCATTGGGATCATACTTATCAATAATTACCTTAAATGAAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAAAAACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGTGATGGAAAAAGATATTCCATGCAAATAGAGACCAAAAGAAAGCAGGAATAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAGGAAACAAAGAAGGATACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACATAGGACCACCACACTATGTAAGACAAATGCTAACAAGTATGAAAGGGAAATTAACAGTAACACAATAATAGAGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAAATAAACAGAAAAT TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 24667 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 28508 EMBV3_15422 GTGTCATTTACTCTTCAGGAGACCCTATAAAATAGACAAGGTTCGGGCTTCCCTGGTGGC Gene GeneID:537985|HIST2H2BE:NM_001099384:133_cdna UTR3_Alt 1 NULL GeneID:537985 3 GENE HIST2H2BE NULL histone cluster 2, H2be EMBV3_25787 GTCAGAGTGGAGACGTACTAAGTGCAAGATATGAAATTGTTGATACTTTAGGTGAAGGAG Variant GeneID:613808|CLK1:NM_001102271:137_cdna 77^473 3 EMBV3_12758 GeneID:613808 2 GENE CLK1 MGC148790 CDC-like kinase 1 EMBV3_16374 CTGAGTCCAGAGCCACCCAAAGCATCCTACTCTTGGCGAGCACCTTCATGTGTTTCCACA Gene GeneID:100138511|BOSTAUV1R421:XM_002695276:37_cdna Constitutive 0 NULL GeneID:100138511 18 GENE BOSTAUV1R421 NULL vomeronasal 1 receptor bosTauV1R421 EMBV3_24998 AGAAGAAATACAGGCTGCAGAGACAGCCCACTCGCTATCAGGATTTACTCTCAGGAAGTC Gene BVT0102_250336 + 1 EMBV3_01606 GK000030.2:111588264-111615617 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40456 TCAGCCACCTCTGCCCATCCTCCTTCTAACTTTCAGCAGCCTTCAACAGCATCATGACCA Gene GeneID:281153|FATE1:NM_174052:86_cdna Constitutive 0 NULL GeneID:281153 X GENE FATE1 FATE MGC133937 fetal and adult testis expressed 1 EMBV3_34564 GCATGTTTGCGGTCTTGTGTATTTGTCGTGTTATGCTGTCAGGAAGAACTGACTGAAATG Gene GeneID:519993|LRP12:XM_002692755:92_cdna UTR3_Alt 2 NULL GeneID:519993 14 GENE LRP12 NULL low density lipoprotein receptor-related protein 12 EMBV3_15111 TTCAGAGTGTCAGATTTCGTCCACCAATCCGTCGTCCACCAATCCGTCCGCCGTTCTATC Gene GeneID:282165|CATHL2:NM_174826:52_cdna Constitutive 0 NULL GeneID:282165 22 GENE CATHL2 Bac5 MGC152065 cathelicidin 2 EMBV3_42387 TCTTGGAACGTGTGGAAGTTGGTCTCAGTTCCTGCCAAGGGGACTACATCCGTGTTCGAA Gene GeneID:506405|DHX16:XM_002697331:258_cdna Constitutive 0 NULL GeneID:506405 23 GENE DHX16 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 16 EMBV3_41766 GGTGGCAGCCTTCCATTTTGTATGTTTAAAGCACCTTCAAGTGGTATTCCTTTCTTTAGT Gene GeneID:281427|PRNP:NM_181015:8_cdna Constitutive 1 NULL GeneID:281427 13 GENE PRNP MGC140197 PrP prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) EMBV3_27472 GGCCTGTGTCTGCCTCCTTCCTGAGTAGGCCAGGTGGCCCGGCGGGAATTCCAGACCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10657 TGCTGCTCATCAAGGTCCCCAGATACGCGCTCTGGCTCCGCCAAGTCACTCAGCAGCCGA Gene GeneID:617946|PROZ:XM_002692014:14_cdna Constitutive 0 NULL GeneID:617946 12 GENE PROZ NULL protein Z, vitamin K-dependent plasma glycoprotein EMBV3_31163 CCTGCTGAGTAAGGGGAGGAAGATTCCTACAGCCTGTTAAAGTCTATGGCCTACTTTTTG Gene GeneID:518246|GIPC2:NM_001080279:44_cdna Constitutive 0 NULL GeneID:518246 3 GENE GIPC2 MGC139080 GIPC PDZ domain containing family, member 2 EMBV3_19393 CAGATCCTTGCCAGCTCCTAAAACCTATGGCAGCATGAAAGATGACAGTTGGAAAGATGG Gene GeneID:534203|SLAIN2:NM_001035405:113_cdna Constitutive 0 NULL GeneID:534203 6 GENE SLAIN2 MGC128983 SLAIN motif family, member 2 EMBV3_17094 GCACCACATCATCCAGGAACTGCCTCTTGATAACACCTTTGTGGGCTGTGATTCCATCTC Gene GeneID:538674|PCDH11X:XM_002699765:29_cdna Constitutive 0 NULL GeneID:538674 X GENE PCDH11X PCDH11Y protocadherin 11 X-linked EMBV3_39520 AACGTTTACTAAGTCACTATATGAGGACACATGGCCCTTGGTGTAAGTCTTATAGACTGC Gene GeneID:539270|ABT1:NM_001076152:125_cdna Constitutive 0 NULL GeneID:539270 23 GENE ABT1 NULL activator of basal transcription 1 EMBV3_34758 ATTCCGGAGTTCTGGATGGGAGTGAATGGCAGGAAAGAATCAGCCCCAGTGAGATAACCA Gene GeneID:535006|TRIT1:XM_002686461:493_cdna Constitutive 0 NULL GeneID:535006 3 GENE TRIT1 NULL tRNA isopentenyltransferase 1 EMBV3_09506 TACTGCGACACATACCTCACCCATGATTCTCTGCTGCATTTCAACAAGGAAAGATACCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40653 GAAGGGCTGAGACTTGGGGTGTAGACACTGCAGAATCAGGCACATTGGATCACTGGTTTT Gene BVV0102_020841 + 0 NULL GK000008.2:70175917-70186538 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225768 TCONS_00225767 TCONS_00225770 1 XLOC_137838 Coding TCONS_00225767 XLOC_137838 Coding Coding PIWIL2 8:70092547-70178903 = TSS168948 6069 1 TCONS_00225767_5 969 0.0909540286702916 23 0.929986682878814 0.000930431265156124 0.000638248965907884 0.000953520299865388 0.000491809560189699 0.00175783584773004 0.000155370179271717 0.000138419780868334 0.00076992802408878 0.000697971550660852 0.000227802420111366 1.74868000360319e-05 6.84228731454254e-08 1.4906907521252e-09 2.63199038723136e-09 0.000151747507694693 0.0046951562314643 0.000911875298836181 0.000582669479602979 0.000188322376822229 0.00142561231231755 1.80860468901258e-09 0.000377043413631914 0.000422212119506781 0.00107091086434011 0.000127173420179318 0.00123084965051721 0.00081636539138849 7.34665134572995e-05 2.97024594551026e-08 0.000336872923252618 XM_002689768.3 PIWIL2 PREDICTED: Bos taurus piwi-like 2 (Drosophila) (PIWIL2), transcript 0.0 8561 100.00 0.782006920415225 NM_018068.3 PIWIL2 Homo sapiens piwi-like RNA-mediated gene silencing 2 (PIWIL2), 0.0 3889 87.02 0.526775416048772 TCONS_00225767_5 sp|Q8TC59|PIWL2_HUMAN PIWL2_HUMAN Piwi-like protein 2; 0.0 1784 88.49 0.998968008255934 2 coding 0 0 0 0 0.141716171037591 0.58358697280006 0.414229662491307 0.0588471718377786 GGAACTCGAGGTCTGGAGCATGTGGGCTTTTGGCGTGGTAGGATCGTTGAGCGCTGGCTTCTCCTGAGGCGCAGCCAAGATGCTCGGTGGAGTCCAGCACCTGTGAGAGGACGGGACGCAGGTGTGGAAGACCAGGGAGGCAGAGGTCGCTCTGCTACAGGCCAGCCTTACAATGGATCCTGTCCGACCACGCTTCAGGGGCCTGTCTCCCGTGCACCCATCTCAGTCTGTGCGGATGCCAGGCTCTTGGCCACAAGCTCCAAAACCTTTGGACCCAGCTCTGAGCAGGGCAGGACCTGCAGGCAGGGGCCATGTGTTTGGAAAGCAAAAGGAGCCGAGTCCACAGAGTGGGCCAGTGCAGAAGGAGTCTGTGGGTTTAGTCTCAATGTTCCGAGGACTGGGGCTTGAAACAGCATCCCAGACCCCTCTGAAACGCGAGGTGCCTCCTTTAGGTAGAGGCATTTTAGGTCTAGGCTTATCTTCCAGTATGGCATGCAAGGACAAAGAAGAACCCCATCCCACTTTTCTGGATCCTTCATCGTTGGCAGCTGGGGATAGCAAGATGGCAGAGGCCTCCGTTGGTTGGAATAGGATGCTCAGAAGAGGAACTTTGGACGCATCTTTGTTACCAGTGGGAAGAGCAGCTGGTTTAGGCAGAGGAATATACAAGGCTCCTGGTGCTCTCAGCCCGCCTTATCAGGATCCTGCCCAGCTCTCACCTCTGCCCGCTCTGCCCCAGGCCCCACTATACTCTCTTGATACCCCTCCACTTGGGACTGCAGAGCGCAAGAAAGAGCTTTTTGTGAAGCAAGGATCAAAAGGAACACCTCAATCTTTGGGATTGAACCTTATCAAAATACAGTGTCATAATGAAGCAGTTTATCAATATCATGTGACTTTCAGCCCCAACGTGGAGTGCAAAAGCATGAGGTTTGGCATGTTGAAGGACCATCAAGCTGTCACCGGAAATGTCACTGCTTTTGATGGATCCATTCTCTATCTACCTGTTAGGCTTCAGCAAGTTCTTGAGTTAAAGAGTCAAAGGAAAACTGACAGTGCTGAGATCACCATTAAGATTCAGTTGACAAAGATCCTGGAGCCCTGTTCTGACTTGTGCATTCCCTTCTACAATGTTGTGTTCCGTCGGGTAATGAAACTTTTAGATATGAAGCTTGTGGGAAGAAACTTCTACGACCCTACAAGTGCTATGGTGCTGCAGCAACACAGATTGCAGATCTGGCCGGGCTATGCAGCTAGCATCCGGAGGACAGACGGAGGTCTTTTCCTGCTAGCGGATGTCTCCCATAAGGTCATTCGGAATGATTCTGTGCTGGACATCATGCACACCATGTACTTGCAGAACAAAGAAAACTTCCAGGACGAGTGCACTAAGCTTCTGGTTGGCAATATTGTTATAACCCGATACAACAATCGTACCTATCGTATTGATGATGTGGATTGGAATAAGACTCCAAAAGATAGCTTCATCATGTCTGATGGGACGGAGATTACATTCTTGGACTACTACAGCAAAAACTATGGGATCACAGTAAAGGAAGAGGACCAGCCACTGCTGATCCACAGGCCCAGTGAGAGACAGAATAACCAAGGGATGTTGCTAAAAAGTGAAATCCTGCTGCTCCCTGAGCTTTCCTTCATGACTGGAATCCCTGAGAAGATGAAGAAGGACTTCAGAGCCATGAAGGATTTGACCCAGCAGATCAACCTGAGCCCCAAACAGCACCATAGTGCTTTGGAATGCTTGCTACAGAGAATTTCGAAAAATGAGACAGCTAACAATGAACTGACACGTTGGGGACTCTATCTGCAGAAAGATGTACATAAGATTGAAGGACGTGTTCTGCCAATGGAAAGAATTAACTTAAGAAATATATCATTTATCACATCTCCGGAACTAAACTGGATTAAGGAAGTAACCAGAGACCTTTCCATCTTGACTGTCCCCATGCATTTCTGGGCACTGTTTTACCCAAAGAGAGCAATGGATCAAGCCCGAGAGCTGGTGAACATGTTGGAGAAGATAGCCGGCCCCATTGGCATGCGTATGAGCCCACCGGCCTGGGTGGAACTGAAGGATGATCGCATAGAGACCTATGTCAGAACCATTCAATCCATGCTGGGGGTTGAGGGCAAGATACAGATGGTTGTTTGCATCATCATGGGTACACGTGATGATCTCTACGGGGCCATTAAAAAGCTGTGCTGTGTGCAGACTCCTGTACCCTCACAGGTCATCAATGTCCGAACCATTGGTCAGCCCACCAGACTTCGAAGTGTGGCCCAGAAAATTTTACTTCAGATTAACTGTAAATTGGGTGGTGAGCTCTGGGGAGTAGATATTCCTCTGAAACAGTTAATGGTGATTGGAATGGATGTTTACCATGACCCCAGCAGAGGCATGCGCTCCGTGGTTGGCTTCGTCGCAAGCATCAATCTCACCCTCACAAAATGGTATTCACGAGTGGTATTCCAGATGCCTCATCAAGAGATTGTGGATAGCCTGAAGCTATGCCTGGTGGGCTCCTTAAAGAAGTTTTATGAGGTGAACCACTGCCTCCCAGATAAGATTGTGGTGTACCGTGACGGAGTGTCTGATGGCCAACTAAAGACAGTTGCCAGCTATGAAATTCCTCAGCTACAGAAGTGTTTTGAAGCTTTTGAGAATTATCATCCCAAGATGGTGGTGTTTGTAGTGCAGAAGAAAATCAGCACCAACCTGTACCTGGCTGCCACTGAGAACTTTGCAACTCCCTCCCCTGGGACTGTGGTAGATCATACGATAACAAGCTGTGAGTGGGTGGACTTCTACCTTCTTGCCCATCATGTGCGGCAGGGTTGTGGCATTCCAACCCATTATGTTTGTGTTCTCAACACTGCAAACCTGAGCCCTGATCATATGCAGAGGTTGACTTTCAAACTGTGCCACATGTACTGGAATTGGCCTGGTACCATTAGAGTTCCAGCTCCTTGCAAGTATGCCCACAAGCTAGCCTTCCTGTCAGGACAGATCTTGCACCACGAACCAGCCATCCAGCTGTGCGAGAACCTGTTCTTCCTGTGACTGGACAGTCAGGACACGGGCTGGTCAGAGCAGGCAGACTTCTGAACTCAGCTGTGAACTCATCTGTGCAGGGTCAACAGCAACCGGAAAGGGGTTTGTGTTGGTGTTTGCTCTTTCGCCAACCCAGTAGAATATCTTTCTTTTCATTTTCTTTTCTAAGTCTGTTAACACTGAGAATCAGGTTCCAACATAAATTTCAGCTAGAAATTGTCTTGTTGCCTTTGTAGAGCAAATGGAGGTAGTCTGCTGCAGTGTAGATGGGGTGGGTGAAGATGGATGACCCTTCAGGAGTCTCCAAAGCTGACAGAAGCTGTAGAAGCCTGAAGAAGCAGCAATTACACTTATAAACTCTGCTTACTGAGCAGTTCTCATTTCTGGTCCAGAGCCGATAGTGAATGAAGTCTTTGCAAAGTTCTTAAAGTAGAGAGCTACTTTATTTGGGCAACTGGAAAGGTAAGAAGGCAAAATTTCTCAGGATTTGGCTGTTGCTGGCAAATGTGAAAGACATGTCGTGAAACCAGCTGGTGGGTACTTTTCAGGCTCTTGCTGACCTAATCGTCTGTAGGGATTGAGTTGATGAAACATGACTTGAACTAGCTTTGGAAGGGGTGTTTAGTTATTTCTTGCCTCCTGAGAGGACAAACGCAGTTTTATCTGTATACTTCAGTTGCTTTATAGTATGCAGTGTTGGTTTCTTCCTACCTCCCCCCCACCCCGACCTCCACCACACACACACATAGCAAGATACCTTTGCTCCTTGTCCTTGTTACTGACCTTTAGTAAGTTTCAGTTTTTTAAAACTAAAAATCAGAACATGTGAAATTCAGTAGCTTCAAAGGTTCATGACAGGCCATGAGCTTTTCTTGACCCTTTCTCTGCAGTGTATCACTTCCTTTTCTGTTGATATGTTTGCAAATTGAACCACTCACTTCCCTTGCTCAATACTCTCTTCCCGGCCGTTAGCTCATTTTGTTAGGAATTTCTCTGAGTCTGCATTAAGATTTCCAGAAGTTGGCTTTGGGAAACATGACACTCCTTCCAAAGTCCAGACATTTCAGTTTAGAAGGTTGTCACTGTGCCTGCACGTTTCAGTGTGTTTTGTGTGTGTGTTTATTTTTCTGCTGTTTAAAAATCTTCCAGTCCCTTCAGGGCTAATTCGGTCTTACCTTGTTTTATCTAGATTTTTAAAAGCTAGTTTTATTTAACATTTTGGAATTTGTATTTATTTGTGTGTGTATTTTATTTTATTTATTAATTTTTTTGTGTGATGGCAGGGAGGGATGACGCAGAAATCCTCATTTTATATGACAGTGTGTGAGAAGAGAAACTTTAGCTTAAAACTCCTTAGATGAATAAAAGCAACCTAGCATTGCGTTGGCTGCAGCATGCGGCAGGGGCTGAGCAGCGTGGGGGTCCGTGGTCTCATGTGCACTTCTGGTTCCACGCGGAGTGAGGGACAGCGAAGGGCTGAGACTTGGGGTGTAGACACTGCAGAATCAGGCACATTGGATCACTGGTTTTGATCAAACAGTTCTCCAATTCTCTTTGGAAGCATTTTGAATTTCTCTTTTGAAGTTAGGTTTCCTAATTCACATTTCTTCACTTTTTCCTCCTGGTTTTCTTTCCTTGTTTTTTCAGTCTTAATGTGAAATGACTGGGTCATGGGGTAGAAAATAAAAAGAAATTTGTATAAATGTGTAGTTGTGTTTGTAATAATGTTGACATATGGTAGTGACATAGTTCTTTTTCTTCGTAAACCTTGTAGCACTTGTTAGAATTATTAATTTGTTACTGGGTATGCTGGGGGCAGCTGCAGTATTGGTACTCGGGTAATTTCACTGAGATCTGGCAGTAAGATTTCTTGAAGAAAATACCAACAGTCTGTCTTCTGGGACGAATGAGGCACGTGTTGTATATATGGGTGTGTGTGTGTTTTGTCTTGTTTTCAAAACTCTCTTCCCATCAGAGAATTTTTGTTAGCCTGAGTAAAAGCCAGCTCCTAAGGGTGGCCCTTCCCTCTCGCCTTTTCCTAATGCTTGTCCTTCTTTGCTTGTACTTCATGGTGTGTCTGTAACCTTTTTAAGTACCTTCCCAAAGAACCCTGACTGCTTACTTCACCACTACATCCTTTTCTGTTTATTTAGAAATTCCATCTTCAGTGATTCAGTGTTTCTTGAACTCATCCTTAAAAGAATCTAATTTAGCTCCTTTTTACTTGAGCAGCATTTTATTGAATGGTGTGAAAAGGGAAGTAGTTTTATAAAAGACTACCTCTTCATATTGAAAATGTTATAACTTGTGCCTGAAATTTCTCAGTCATTTGGGATAATTGGAGAAAGACCCTATTTTCTCTTTTTTTCCCCTAAACGTAGCTTTTTCTGAGTGTCTTACCTTTCCCTGTCTAGACTTATTTTCTCTCTTTTAAAAAAATTAGGAAATTCAAGAGAATGAGAAAAAAAAGCCACAGACTGAAAGAAAATATTTGAGAAAGACACGTCTGAGGGGCTCCCTGGCAGCCCAGTGGCTAAGACTGCTCTTCCACTGTAGGAGCTCGAGTTGAATGCCCTGGTCAGGGAAGTTCTACGTGCTATGAGGCATGTCAAAGGAAAAAAAAAAAAGACATATCTGATAAAGGACTGTTATCGGAAATATACAAAGAACTCTTAAAATTCAACAGTAAGAAAACAACCTGATTAAAAATTGGGCAAAAAGACCTGAAGAGATATTTCACCAACTAAGATATACCGTTGGCAAATAAGCATATGAAAATATGCCCAACATCATATGTCATTAGAGAACTACAAATTAAAATGAAATACCACTGCATACCTCTTATTAATAGAATGGTCCAGATTCGAAACGCTGACCACTCCAAATGCTCGTGAGGATGTGGAACAGAAATTCAATCATCCATCGTTGCCCGAGGGAATGCGAAATAGCACAGCTAGTTTAAAAGGCAATTTGGTAGTTTCTTACAAATCAAAACA EMBV3_01201 AAGTGTCCCGTGAGAAGTGAAAACAGTCCTCTAACCCGGGCTTCCCGTGGGTTTTTGCTT Gene BVV0102_018743 + 0 NULL GK000019.2:35536124-35543288 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099804 1 XLOC_060047 NonCoding TCONS_00099804 XLOC_060047 NonCoding NonCoding - 19:35542010-35542948 - TSS74180 938 0.53091684434968 1 0 0.000319110143832623 5.35630695730006e-05 1.97313455957838e-05 2.65591442537244e-05 0 1.52539794796669e-05 5.59545126872578e-05 0 4.20583672927199e-05 0 0 0 0.000146828867385844 1.5044782343972e-05 0 0.00011262911305689 0 0 1.52898327762622e-05 0.000138001875772163 0.000155346503615644 0 0 0 2.95457349005874e-05 7.51115839157048e-05 0 1.02400566110699e-05 0 0 XR_229450.1 LOC101903516 PREDICTED: Bos taurus uncharacterized LOC101903516 (LOC101903516), 1e-11 75.2 85.94 0.0671641791044776 NM_001172633.1 OLR1 Homo sapiens oxidized low density lipoprotein (lectin-like) receptor 1 (OLR1), transcript variant 3, mRNA. 4e-06 57.2 78.05 0.0842217484008529 0 noncoding AGTGTGTATCAATGGTTCCTTTTTATTGCTAAATAGTATTCTGTCGCATTGATATGCAAACATTTATCTGTTGAGGAACATTTATGTTTCCAGATTTGAGTTATTACAAGCCAAGCCTGCTGTGAACATTTGTGTCCAAGTCTTTGGATGTGTTCGTGTGGGATGCAGCGGGAGGGCTGCACCAGATGGAACGTGTGTGCTTCACATTTTAAATAAACTTTTAATTCAGAATAACTTTAGATTTCCCCAAGAGTTTCGAAGATCGCATAGAGTTCCATTTACCCAACTCAGTTTCCCTTCCTCCTAGCCTCTTCCTTTGCTTTGATTCCTCAACGTGAAGAAACTGACATCGGTACATTGTTATTAACTAAACTCTAGACTTTATTTGGATTTCACCAGCTTTTTCACCAATGTCATGTTTCTGTGTCCGGATCCAGTGCAGGGCACACAGGTGTGAGGTCTCCCCAGTCTGCGCCGGCCCGTGACAGCGTCCAAGCTGGCTCTTTCTTTCGTGCCCTTGGCCGACCTGAACAACATTGGCCAAGTGTCCCGTGAGAAGTGAAAGCAGTCCTCTAACCCGGGCTTCCCGTGGGTTTTTGCTTCTGACTGGACCCAGTCACGGCTTCGGAAAGTCGGCCAAGTAACCCTTGGCGTCAGGGTGGGCCACTCAGATGTGACCCTTCTGCCCATTTTCCGCGTGTGAGGGCCGCTGTCCTTGTTCTGCAGAGGGCGCCCCCCACAACCCCCAGCAGCGGGCAACACCCTCAGGACAAACATCCATGGATCACTAGGTATTCTTCTGTCGGGCGGAGCAGTTCCTCTCTTTCCTTGCTCATTCACTCCACCACAGAGGATGCACATTTACACCTCGGGTACAAGCCAGTTCTGCGTTACTTACGCAGTCCTCGCATTGTTCCAGTTTGGACCTTGGTAGGCTC TCONS_00093476 TCONS_00093477 TCONS_00093478 TCONS_00093479 . 5' 341 TCONS_00093476 TCONS_00093477 TCONS_00093478 TCONS_00093479 . 5' 341 EMBV3_05610 GCTCAATGAAATCGGCGTCTGCAATCTGTCCAGCAGCCAGCCTATCGCTTTCGATTCCTA Gene GeneID:100300767|LOC100300767:XM_002683887:2_cdna Constitutive 0 NULL GeneID:100300767 Un GENE LOC100300767 NULL similar to HBS1-like EMBV3_04825 CCTTTGGCCTTCCCCAGAGGATCATCACACCAGCACTTTATACACTTCCTGCTCACAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08512 TGGCATTACAGCCGTCTCTTTAACAGCTGGGTGAAGCCGAGAACATACTGGAAACAGAAA Variant GeneID:512609|C8H9ORF46:NM_001034426:53_cdna 458^567 2 EMBV3_41784 GeneID:512609 8 GENE C8H9ORF46 MGC126999 chromosome 9 open reading frame 46 ortholog EMBV3_04809 ACCCATGACCGAGGTGCCTCTGGAGCTGCTGGAAAAACAAACTCCAGAAGTCCTGTACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37521 GATATGAGATCCAACACAGACTGGCAAGGAACAAACATGAACAGCCACCAGCCTCCACCC Gene GeneID:515600|LOC515600:XR_083949:2_cdna Constitutive 0 NULL GeneID:515600 18 PSEUDO LOC515600 NULL similar to cationic amino acid transporter 5 EMBV3_23999 CCCATTGCTGAATCCATTTGCCTCTGTTAGATTACAGGTGTGGGCGGTCTGCTCAGTATC Gene BVV0102_082621 + 1 EMBV3_16146 GK000007.2:73757647-73778301 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217698 TCONS_00217702 TCONS_00217695 TCONS_00217701 TCONS_00217694 TCONS_00217699 TCONS_00217696 TCONS_00217703 TCONS_00217693 TCONS_00217704 TCONS_00217700 TCONS_00217697 1 XLOC_131561 Coding TCONS_00217695 XLOC_131561 Coding Coding PWWP2A 7:73760397-73781365 j TSS162058 6957 1 TCONS_00217695_4 343 0.0140865315509559 3 0.668335956503076 1.21127044199836e-49 6.85800871088503e-44 8.20490533527035e-58 1.89059918648775e-69 1.02936551875554e-39 4.91450795056266e-94 3.80294427789598e-62 9.03663023041063e-56 2.94838640528633e-42 5.09943503634052e-06 4.48635725647363e-06 5.97241310617232e-06 1.14022217317516e-52 2.15086435788577e-05 2.11962471424764e-24 0.00431087492593671 0.00326235889996332 0.00494048951064027 2.45126800581458e-106 3.17904364678744e-59 2.5813172062157e-48 0.00168158282071006 0.0019640907696248 0.0021700553417038 2.33108293051785e-55 8.01063887627051e-64 3.87067649099801e-31 0.000311801511022875 0.000168748605822096 0.000509571163184325 XM_002689348.3 PWWP2A PREDICTED: Bos taurus PWWP domain containing 2A (PWWP2A), mRNA. 0.0 1752 100.00 0.13942791433089 NM_052927.2 PWWP2A Homo sapiens PWWP domain containing 2A (PWWP2A), transcript variant 0.0 2266 92.66 0.221072301279287 TCONS_00217695_4 sp|Q96N64|PWP2A_HUMAN PWP2A_HUMAN PWWP domain-containing protein 2A; 0.0 576 94.00 0.871720116618076 0 coding 1 1 1 1 -0.0591863899433136 0.699910841878742 0.00996699497851073 0.888732012089114 GTTGCATTTATTGGACATGTCTAGTTGAGAGAGTGTTACAGCAAATGACATTAAATATTAAGCTGTCTGACAGAAACTCCTTACTGATTCAAGACTGAAAAGATCTATTTGAAATAACAGCAGCTATCATGGCATTGCTTAGAGCAACTATTGAGTATTTCCTGTTGAGTGTATGCCAAAATGTAAGACAAAAAAAATGGAATGGTATGCTTTGGGACTTTTGTGGGGAGGTCCATCCGTAGGTTTTTGGATTGTTTTTTAAAGTGAAATAGCTTTCAAGGAAGGTCACATAAACAGTAGGTGGTCTTTCAAGAAATGGAATTGTAGATGCTAACTTAATGGTTTCTTTTTTTCCTTTCATTTCTTTCAAAGGTTTGGGCCCCATGGGATCCCTGTGACAGTATTTCCCAAAAGGGAATATAAGGATAAACCCGAAGCCATGCAGCTCCAAAGTAATACATTCCAAGAAGGGACAGAAGTCAAGTGTGAAGTGAATGGTGCTGTTCCCAATGACCCTTCTCCCGTCCCGCCTCCTGAGCTCAGCTTGGCCGAAAGCCTGTGGACTTCCAAACCACCACCTCTCTTCCATGAAGGAGCACCTTATCCTCCCCCTTTGTTTATCAGGGACACATATAACCAATCAATACCTCAGCCGCCTCCTCGGAAAATTAAGCGACCCAAACGAAAAATGTACAGGGAAGAACCTACTTCAATAATGAATGCTATTAAACTACGACCCAGGCAAGTTTTGTGTGACAAGTGTAAAAACAGTGTTGTTGCTGAAAAAAAAGAAATTAGGAAAGGTGGTAGTGCAAGTGACCCTTCTAAATATGAAGATAAAAAACGGAGAAGTGAAAGCGTAACTACTGTGAACAAAAAACTGAAAACTGACCATAAGGTGGATGGGAGAAGCCAAAATGAAAGCCAGAAAAGAAGTGCTGTGGTTAAGGTTTCAAATATTCCTCACAGCAGAGGCAGAGTAGTCAAAGTTTCTGCTCAGGCAAATACATCAAAAGCTCAGTTAAATACTAAAAAAGTGCTCCAGAATAAAAACATGGATCATGCAAAAGCTCGGGAAGTGCTGAAAATTGCCAAAGAAAAGGCACAGAAGAAGCAGAGTGAAACCTCTACATCCAGAAGTGCGCATTCAAAAGTTCATTTCACACGTCGGTATCAGAACCCTAGCTCAGGCTCTCTTCCACCCCGGGTTCGTTTAAAGCCCCAGAGGTACAGGAATGAAGAAAATGACTCTTCTCTGAAGACCGGACTGGAGAAAATGCGAAGCAGCAAGATGGCACCCAAGCCCCAGTCCCGTTGCACCTCTACCCGCTCAGCAGGTCTCAACAAATGGCAGCTATTACATCAGACAGTGACGAGCGCTGCTGCTCCCTTACAGTGTCTGACAGACCACTGTGGATTCAGACTGGGAGCATTGAAGTTAACAGTGAAACGGGCAGCACAAAGACATTAGCAGGCTGCTGGTTTCATGGACCTGTACCACAATGACAGAGAACACCAGAGCATCAGGACTGAATGAAATTGGAGACTCAGATTTTTAAAGCTGCACTAAGAAGTAAATGTTCAGGCAGTGATTAAAACCAACAGTCTATAAAGAGGCACTTGCATATTGTGCTATATTAAACTGAAGAAAAGGTATTAGGGGAATATTTTATTAAAAAAAACCTATTGCAATAAATTATGCATGAGATGAGGAGGAAAGTGATGTGAAATACGCAAAGAACTCTTGAATTCTATGTGTGAAGAATCACTGACAGTACCTTCTTTTGAACGTGAAGTTCTCAGTACAGTTTGGACACGCCTAAAAGGCACAGGATGATGACAGAAATGCTGAATTATTTTTCATATTAAAACTGCTTTCTCCAAGGTTTACTGTTAATCAGCTCAGAAACGATGATCTAACATCCTACTAAAAGGATGGTAAAGTGTCCCTATACCCCACCAAGAAAATTTGGATCTTTTCTTTAATAAAGCAGGACTATGCTCTCTTAAATATACATTTGCTTGTTAGAACATATTAAGATGTATTTATTTGCCACCAGTATTTAATGTTTTCTGCACATTTTCATAACTACATTCTTAACTTTCAAATTCTGACTCCAAGTGGATAGGCTACTGTCAATCTTGGAGTGAAAACATACTCTCTAGGAACTAGTTCTTAATCCTGCTGAGCTGGAAAGGCTTTATTCTTCCTGTCCTTACTGATTTTATCGAGTTCACAAAAGGTGATAATATCTGAATTTTGATACTGACCTCTCTCCACAGAGAGCCCCTCTTTCTAATAAGTGCAAGAATTCCTCAGAGGTGTCCGATGGGACTTGATCCTGGGGAACAAGCAGCAGGAACCATAAAGACGGTGAAGTTTTCATGCATAAAGTATGAATTCTTATTCACAGAGACCATAATGTTTTATCTATGAAAATTACACATTATAAAAGACCTTACTTTTTCTTTTTTAATGAATGGAGAAAACATTGAGAAAACCAGATGAACTTGTTAGTACTACATTTTTAAGGCATTTTATATTTGATGGTGCCGTACTTTTAATAATATACCTGAAGTTTTTTAGTGGCAATACTGATTTATTTTTTAAACCAGAAAGGTAATCCATAGTGATTACTTAATACAAAAGGAAAAAAATGCCAAAAATAAAAATACAAAATTCATTTGAAGCAACATAAATGATAACTGAGCATTTGGCTTCAGTGCTCAAACTTTGCATAATCTTACTATATGTGTTTGGAATTACTTATTAACCCCACACTCAGGATTAACACACAGTTCTGGGTAAGTTTTAGAACATTTACTATACCAGCTAGGATCTGTTTTACAACCCTAGAAAAGGTAGGCAGTCTTGCTTCTAGCGAGTTTAATGCCAACCCTAATTACGCTGTAACTAAAAGTCTTGATTCCATTCTAAGATTGTCTTTATAGAAAATTTTTTATCATGAAGTCATTGTACATTTGATGAAGTCTGAAAGAGTCAGCTCAGGAACTGCAGCAGCAGGAAGCTCTAAACACAAGCGACGCTCTGCTCTGGCCCAGAGCTTAGGCTGGGGTCCCTCTTGTTCTTTCAGATCCGTAACCCAGCAGTACCACTTCAGGCTCATTTCTGATAACCTGATAACTCCCAGATCATAGCAGATTTTGCATAATCAAAACTTCTAATTGCAGAGTGATGGAAATGACGAAGTAACATAAAGGCAAAAAGAACTGGGAGAGATCAGGTTTTAAGTATCTAAACATTTTTTATGACAATTCTCAGTGATGTTTGTTATAAACCAGACTTTCATTTTTTTGAAAAATGAAACTTGGTGGTATTTAAAATCTAGACATACCATGTTTGCTATTTCACCTTCATTGCTTTAGTTGCTTAATATTTAAGCTTTGCTTCATGCTACCTTCATCTGTATTTCAAATCTTCACAAGCCTATTTCATTTTGTAGACTTGAATGACAACAATTGTTTCTCATCTAAACTATGCTGAGACCTAAATGTTAAAGAATGTTGTGTAACATATATTCAATAAAGTCTTGATTTTTTTAAAATTTAGTTATTTAAAAACTATTTGTTTACTACTTAGGAGTTAGGTTTTAAAGATTATTTTTAAACTGTTAAGATTCAACCACTTGTTCTCTAGGAAGCTGTTTTTAAGCAGCACTGCTTCCTTAGGAGAACAGCCTATAATCACTGGGAGATTTTATGGGATGTCTTTATGACCAAGGATGGAGGAAGGGAAACTAGCTTAATAAGGAACTTGTGCACAAACATTACTGTTTTCTGATAGAAACAAATAATCTACCATTCAGAGCTGGATGTAACTAAACATGTACTGTTGGGTTTGTCTTAATTTCAAGTAGTTCTACTCTTATGGATAAATGGTTGCTTCTTTAAAAGCTGAGTACCTCCAATCTGAGGGCAAGTGTTTGACCAGAAACACTAAGTTGTTAGGAAAAATTAGCCTCTGGACACCTACTGGACAGCTGAGATTTAAAAAGGCTGATCTAGAAACCTAAAGTCAGGTAAATTCTGTTTGTTTTTTTTTTTTTTCATTTAAGTAAAGCAATCCTTTAGAAGGCTGCCTGTTATTCCAGAGTATATACACAAGAGTCTTTAACTGCAAACATTCTCCCATTTCAGTTTACCTAAATGTGTAAGAAGGAAGCCACTGGAGTATCTCCCTGGGAATGCTGGCATGTCACTGCACATAAAAGTAAGCTGTTTTCTTGCTTTTATACGTGACAGCTCATTTCTACTCTTTCAAGTAATGATTCTTCCCTCAGTGCTTTGAAGAGAGTATACTGTAAGTGTTTCTTAAGCATACTTTTCTCTGGTGAACAGCACCCTGCCAAATCTTGGCTTATTCACAAAGAAGTTTCATGGCCTTTGCTTTGATATCAAAGGGTGATGACCTTGGGATGAAAGAATACAACTCAGGCATTCTGTGCCAGAGGAAGAAAGAGCTGGCTAAACCAGTGGCTAGGTCATTGTCCTAAAGAGTTAATACTTCTAGGATTAGCCCTTCATTGCATTGTGGAGCACGGTTTTAGAAGCAACCTCACATACAGGAGGCAAAATGAGTGGGTGATATTAGGATGATGCTTCTATCTCAACAGGCACTTCCCTTGTAGCTCAGTCAGTGAAGAATCTGCCTGCAGTACAGAATAACCTGCTTTACTCAGTAGAGACATGTATTTTAATCTTAGTTCTATCAGTTACCTTATTGACAGAAGAATCACTTAGTGGCCACACTGGCCAAGATGAGGTATGGAAAACAGGTGTCTCACTCAACTAGCTCGAGTTCTTATTCAGCCAAGGCCAAAAACACAGGTGACATCAGGGAACTCTACAGAATAGTTCAGTCAGGGAATAATCCTACTTTTCTGAATTCTGCCTGTGCCCAGGGCCTGAAGCCTGTGGATACTGAGCAGACCGCCCACACCTGTAATCTAACAGAGGCAAATGGATTCAGCAATGGGCAGTGCCCCGAGGTAAAGAGGAGCCTGATGTGTCCCTGCTCTAGAAACGCAGGGCCAGGGGCTTCAGTGAGACACAAAGCGACCTCACAGAACGCGCTTCCACAGAGCTGCTTTCATGCTGGTAGAAAGGGAGCGGCTGGAAAAGCTGCCTCCTGGCCTCTGGAGCCGACTGAGAATCCAGTCAGTCACACGGCTCTTGGAAATAAGACAGTTTCCCAGCTAACTCCCTGAGGTAGCGCTGCAGATAGCATATCTGTTCTGGGCAGCCAAACTATCCCTACACAACAGTCCTGTGTCCTTGAGACTAAGTACCAGAGAGTCCTCCAAAGCCTCCATCCTTTGAAATGTAAACACTTTCCCATCTCACACTGTTCCCTTGCTTCCCAACCCTGGCCTCCTCCTTGTCTTTAGTTTGCTTGACGATGCTCATGCTTGCTGATTTCTGACTTGGAGGGCAGTGTGCCTGGTGTGATGGGGTGTCAGATGCGGACCTCCGCTGGCACAGCACTCCACCTGGTACTAGGAGTTCCACTGTCTGCAGATCTGGCTCCTCACACCTGCAACTAAAGGCTTCCTGAAGAGCATCTGGGTTGATTCCCTTCACATCTGTCAATCATGACATGTTTGGAGAAGCCCCAGTGCCTGACTTGGGGTTGCCATCTGGGTAGGCTGTATTTTTTTTTTTTTTTTTAGCAAGGTACAACTAGCAGCTGGGACTTGATCTCACCCACAGATTATTAGCTGTGGGCTACCCTGGCAGTGAGGTGACAGGCTTTGCCGTGCTTCAGCTAAGGTGGGAGGGAATGTGAAAGGAAGCTGTAGGGAGTCTAATTCTAGTCTGGCCAATAGAAATTCTCAGGAGTTTATTCCTAGCTTGCAGCCCTCAGAGGGTTGAGAAATTAGAAGAAAATGGAGTATTTTTTTAACCCTAGAACATTTCAAACATCTGTAAAGGCAGACTGGTATAAGAAATAAACCCCATGTACCCATCTTTACCTTAAAAAATTACTTACTCACAGGAAGACTGAAATTTTTGATACTCTGAAATACGAGGACATCCTCACTAGTTTTCATAAACTAACCTCTAGTTTCCTTGATTGCCCTTTGGAAGTTCTTACACAGTCACTCTGATGCTCTATGGGCTGGCTGGTAGCAAGTAACCCATTTCTCATTTTCAGGAGTACTAATGGACTCAGTCTAGTATGAGCTCAAGGCTGCTCTCCAGACAACAGATAGTGACTGGAAACTGCCATTCTCTGCATTAGCTGTGCAGCTTCCCTGAAGAAAGAGAATTTCCAGCCACTTCTGGTGGAATGTTCACATATCAATGCTTCCTTTTCTAAAGGAAATCCAGATGAGAGAAGGACTCAGCTGCTTACTACTGAAGTGCAGAGAGGGGTAGGCTGCAAAGGATGAGGAACATCTCACTGAAATTGCTTCCAGGAGATTTTTCCTAGGGTGTGGGAATGTGTTATCAGGTACACAGTATACACCCATAGGAGGATTTGAGGAAGATTTCAGTGCCTTAACAAGTAAGGCAGGGTCAAAAGCAGAAGTGATCAGAGAGCAACATGGACAGAGCTGTGGGCTGGCAGTGACCCCTGGGCTGCAGGCTCAGTGAGACTGAGCTCTGGCAGCCAAGGGCCTTCCTTTCCCACAGGGGAGTGCACACCCAGAGCTGAGGAGGAAATGAGTTTAAGCTGCTGCTGGCTCCTGTCGGGTGTGGTGTCTCAGGTTTACACTCTAGTCTTGGAAGGTTATTGGGTCCTGTGCTTTAAAGATCCTTCTCACGATTAAAGCAGCCAGTAACTTCTTTCCATTCTCCTTAGCCTCCTATCATAGTCTTCCCCTTTGACATTCCAAGTTTTGCTAAACCGGCAATTGTAAGGCAATTTGCAGGTCTGCTCATTAGCTCCTGGGAGCAGATAACCTTCCGAATACACCTTCTAATCGGGCTTAG EMBV3_20063 GAACTCCAGCAGACAGGAACTTCTTGGAACCCATACATTTGTAGGTGTATAGTTGATGGA Gene GeneID:535130|SCFD2:NM_001078005:116_cdna Constitutive 0 NULL GeneID:535130 6 GENE SCFD2 MGC139449 MGC157118 sec1 family domain containing 2 EMBV3_11396 TTCTGACACAGCCTGAGAGTGAACCACCCCGGCCCCAGCCCTACTCTGTCAGAGAATAAA Gene GeneID:514735|LAT:NM_001104978:329_cdna Constitutive 0 NULL GeneID:514735 25 GENE LAT MGC157208 linker for activation of T cells EMBV3_41623 GTCCATGGGGTCGCTAAAAGTTGTAAAATCTGTTTTTGTATTTCGTTTAGGTTCAGCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25870 AGATGGCCTCTATACCTACTGGAGCGCAGGGGTAGAAAACCAGCCTGTGCAGAATAGCAA Gene GeneID:520038|TRIM42:XM_002685043:115_cdna Constitutive 0 NULL GeneID:520038 1 GENE TRIM42 NULL tripartite motif-containing 42 EMBV3_07777 CTGTCGCACCCGCCCCTCTCAACACCAGCATAACCAACCACATTAACAAACTGGACAAGT Gene GeneID:506636|SEMA5A:XM_002696441:76_cdna Constitutive 0 NULL GeneID:506636 20 GENE SEMA5A NULL sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A EMBV3_11875 TGCTACAGCATATGGAAAGGGAACCTATTTTGCTGTCAATGCCAGTTACTCCGCCAGTGA Gene GeneID:540789|PARP14:XM_002684794:148_cdna Constitutive 0 NULL GeneID:540789 1 GENE PARP14 NULL poly (ADP-ribose) polymerase family, member 14 EMBV3_20380 CAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCA Gene BVV0102_210955 - 1 EMBV3_18698 GK000026.2:9360346-9410908 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00062753 TCONS_00063037 TCONS_00055302 TCONS_00124927 TCONS_00210177 TCONS_00249921 TCONS_00250503 TCONS_00186108 TCONS_00148465 TCONS_00175865 TCONS_00248863 TCONS_00007532 TCONS_00109859 TCONS_00210508 TCONS_00009883 TCONS_00008225 TCONS_00218891 TCONS_00010052 TCONS_00064811 TCONS_00239219 TCONS_00161793 TCONS_00175545 TCONS_00040583 TCONS_00137302 TCONS_00208127 TCONS_00116666 TCONS_00117484 TCONS_00021596 TCONS_00038933 TCONS_00066192 TCONS_00152628 TCONS_00189806 TCONS_00206861 TCONS_00199595 TCONS_00033746 TCONS_00062743 TCONS_00007555 TCONS_00019962 TCONS_00063180 TCONS_00020399 TCONS_00185807 TCONS_00240878 TCONS_00064867 TCONS_00108589 TCONS_00252056 TCONS_00162783 TCONS_00124845 TCONS_00124584 TCONS_00176254 TCONS_00135701 TCONS_00142124 TCONS_00206539 TCONS_00047865 TCONS_00006827 TCONS_00241788 TCONS_00160965 TCONS_00022065 TCONS_00207514 TCONS_00054939 TCONS_00020016 TCONS_00249012 TCONS_00175818 TCONS_00066259 TCONS_00071185 TCONS_00031911 TCONS_00209098 TCONS_00254831 TCONS_00179470 TCONS_00019263 TCONS_00179054 TCONS_00055388 TCONS_00222115 TCONS_00154085 TCONS_00152726 TCONS_00070810 TCONS_00207359 TCONS_00175199 TCONS_00224114 TCONS_00152738 TCONS_00250938 TCONS_00156870 TCONS_00186411 TCONS_00071110 TCONS_00020010 TCONS_00240475 TCONS_00249570 TCONS_00209529 TCONS_00010588 TCONS_00218178 TCONS_00010779 TCONS_00238445 TCONS_00200933 TCONS_00250197 TCONS_00152859 TCONS_00115687 TCONS_00252012 TCONS_00231502 TCONS_00176249 TCONS_00038457 TCONS_00165813 TCONS_00136848 TCONS_00122321 TCONS_00249283 TCONS_00060369 TCONS_00252354 TCONS_00023615 TCONS_00057311 TCONS_00137224 TCONS_00040835 TCONS_00037625 TCONS_00006222 TCONS_00218899 TCONS_00251930 TCONS_00055867 TCONS_00199603 TCONS_00065249 TCONS_00157488 TCONS_00123618 TCONS_00032143 TCONS_00039853 TCONS_00238357 TCONS_00249989 TCONS_00072815 TCONS_00177280 TCONS_00166139 TCONS_00250580 TCONS_00218553 TCONS_00185582 TCONS_00156997 TCONS_00122096 TCONS_00187057 TCONS_00125001 TCONS_00048558 TCONS_00245928 TCONS_00080765 TCONS_00054574 TCONS_00009591 TCONS_00218851 TCONS_00031495 TCONS_00088087 TCONS_00223462 TCONS_00218943 TCONS_00056728 TCONS_00157440 TCONS_00189890 TCONS_00206887 TCONS_00231487 TCONS_00136896 TCONS_00198816 TCONS_00007442 TCONS_00064461 TCONS_00206419 TCONS_00007719 TCONS_00238326 TCONS_00201733 TCONS_00038667 TCONS_00209835 TCONS_00166733 TCONS_00185876 TCONS_00251706 TCONS_00056147 TCONS_00054954 TCONS_00242007 TCONS_00239418 TCONS_00107447 TCONS_00116101 TCONS_00070840 TCONS_00063487 TCONS_00030941 TCONS_00050046 TCONS_00116696 TCONS_00176255 TCONS_00124110 TCONS_00040698 TCONS_00048821 175 XLOC_155966 XLOC_037480 XLOC_037764 XLOC_033110 XLOC_076470 XLOC_128687 XLOC_152864 XLOC_153446 XLOC_112161 XLOC_090345 XLOC_105644 XLOC_151806 XLOC_003093 XLOC_065763 XLOC_129018 XLOC_005436 XLOC_003783 XLOC_132210 XLOC_005604 XLOC_039535 XLOC_145885 XLOC_098678 XLOC_105326 XLOC_024399 XLOC_083512 XLOC_126640 XLOC_070832 XLOC_071650 XLOC_012269 XLOC_022753 XLOC_040909 XLOC_092393 XLOC_115843 XLOC_125381 XLOC_121248 XLOC_019979 XLOC_037470 XLOC_003116 XLOC_010640 XLOC_037907 XLOC_011076 XLOC_111860 XLOC_147542 XLOC_039591 XLOC_064494 XLOC_154997 XLOC_099664 XLOC_076388 XLOC_076128 XLOC_106033 XLOC_081924 XLOC_086549 XLOC_125061 XLOC_027997 XLOC_002389 XLOC_148452 XLOC_097858 XLOC_012736 XLOC_126029 XLOC_032748 XLOC_010694 XLOC_151955 XLOC_105597 XLOC_040973 XLOC_042957 XLOC_018156 XLOC_127609 XLOC_157763 XLOC_109243 XLOC_009943 XLOC_108827 XLOC_033196 XLOC_135424 XLOC_093846 XLOC_092491 XLOC_042587 XLOC_125876 XLOC_104982 XLOC_137410 XLOC_092503 XLOC_153881 XLOC_095330 XLOC_112463 XLOC_042883 XLOC_010688 XLOC_147139 XLOC_152513 XLOC_128040 XLOC_006139 XLOC_131641 XLOC_006330 XLOC_145112 XLOC_122583 XLOC_153140 XLOC_092624 XLOC_069856 XLOC_154953 XLOC_140991 XLOC_106028 XLOC_022281 XLOC_100653 XLOC_083059 XLOC_073876 XLOC_152226 XLOC_036700 XLOC_155295 XLOC_014282 XLOC_035110 XLOC_083434 XLOC_024649 XLOC_021455 XLOC_001785 XLOC_132218 XLOC_154871 XLOC_033675 XLOC_121256 XLOC_039971 XLOC_095943 XLOC_075170 XLOC_018386 XLOC_023670 XLOC_145024 XLOC_152932 XLOC_044583 XLOC_107054 XLOC_100977 XLOC_153523 XLOC_131873 XLOC_111635 XLOC_095457 XLOC_073652 XLOC_113105 XLOC_076544 XLOC_028690 XLOC_150855 XLOC_049649 XLOC_032383 XLOC_005144 XLOC_132170 XLOC_017743 XLOC_052874 XLOC_136762 XLOC_132262 XLOC_034531 XLOC_095895 XLOC_115927 XLOC_125407 XLOC_140976 XLOC_083107 XLOC_120469 XLOC_003003 XLOC_039185 XLOC_124941 XLOC_003279 XLOC_144993 XLOC_123378 XLOC_022490 XLOC_128346 XLOC_101569 XLOC_111929 XLOC_154647 XLOC_033950 XLOC_032763 XLOC_148671 XLOC_146084 XLOC_063357 XLOC_070270 XLOC_042617 XLOC_038214 XLOC_017192 XLOC_030177 XLOC_070862 XLOC_075662 XLOC_024514 XLOC_028952 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_20091 GGCTCTCGCAGAGGATGTGTTAGACTCAGACTCGTGATGCTGATGAGCGAGAGAAGTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37997 CAGATGTTTCCCACTAGCGCCTCGAACCCTGACACCAGGAATTAGCCCCTTTGAAGAGTT Gene BVV0102_101529 + 0 NULL GK000007.2:44650045-44716148 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220742 1 XLOC_134059 NonCoding TCONS_00220742 XLOC_134059 NonCoding NonCoding - 7:44686416-44687056 - TSS164740 640 1 TCONS_00220742_1 55 1 0 0.00012755344557569 0.00111474842777338 1.44593659776126e-05 6.48762340339095e-05 0.000840862645319448 8.38372697801078e-05 0 0 0 0 0 5.58699512980226e-06 0 0 0 0 0 0 0.000123250462802666 1.12366043465238e-05 0 0 0 0 0 0.000429333699689636 0.00015563316069822 0 0 0 0 noncoding 0 0 0 0 -0.161329761753648 0.283043213672215 -0.0354755535751405 0.464656013235332 GGTCCTTGTCTTTCTCCGTGACGCCTTCAGTTGCTAGCTGAGCCTAAGGCGGGGTGCTGCGAGGACCACGCCAGGGCCTGTGGAGTACAGAAGCCTTCACCTCCCGCACCCATGACACAAGAGAAGTTCAGGGCACCACTAGCAACCGACTCTTTGCCGCCGTCCCTTCCTCAATCTGTGTGGCTTCGCACCTCCATACATAGGCGCCGGGTGGAGTCTGGTGGCCTCCGGAGCAGAAAAGGCGCGCGAGCCTACCCCAGGGACTGCGGCGCGGGCTGAACTTTAAGCCCGAGGCCACAGGCCCGCCCAGGCGGGCCACGGAGTGGTTTATGCTCAGAGCTTGACTGTGCGAGACTGGCTCTTGGGTCTAGGGGAGGACCCTGCCGAGACACTCCGCGGGCAGCGGGGCCCCCCTACCCCAGATGTTTCCCACTAGCGCCTCGAACCCTGACACCAGGAATTAGCCCCTTTGAAGAGTTAACCATAGGAGGCTCGAGATTTACACTCAGTGACGAGGTATGGAAAGAGGAACTGTCAAATTGTGAGCAAATGAGTTGTAATTGGCAGAATACCCTTTCCAAAGAAAAAGATTGCTCATAAATGACCTTAACAGCCTACTTAAATTTGGCTTCCCTGGTGG TCONS_00216763 . 3' 29093 TCONS_00216763 . 3' 29732 EMBV3_25685 GCTAGCTCATAGGTGCCTCTACAGTGTGTATTTAGCATGGGGATTGCAGAGTGACCAGCA Gene GeneID:281649|BLCAP:NM_174250:724_cdna Constitutive 0 NULL GeneID:281649 13 GENE BLCAP NULL bladder cancer associated protein EMBV3_16328 GCGGTCCTTCACCAATGTCAACTCCAGGATGCTCTACTTTGCCCCTGACCTGGTTTTCAA Gene GeneID:280675|AR:XM_002700036:142_cdna Constitutive 0 NULL GeneID:280675 X GENE AR NULL androgen receptor EMBV3_35955 CCTGCAGCCTGTAGCCAGCCACCCGGACACCTCACAGCCTGAGCCAGAGGAGCACCCGGC Variant GeneID:540455|LOC540455:NM_001099109:162_cdna 160^443 1 EMBV3_13671 GeneID:540455 19 GENE LOC540455 MGC160119 hypothetical protein LOC540455 EMBV3_33426 TGGGACCAGCAGAGGGGTTGGCTTTGCCAGCCCCATCCGATCCCTTGCTTTGCAAATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02273 GCCTCATGAACTAGGTGACTTTGCTGTCTTACTGAAGGCTGGCATGACTGTTAAGCAGGC Gene GeneID:524456|SLC39A6:NM_001144092:94_cdna Constitutive 0 NULL GeneID:524456 24 GENE SLC39A6 NULL solute carrier family 39 (zinc transporter), member 6 EMBV3_42872 AACGTTTCAGTTCCTGTGTCGGTCTCCATACTCTCACTGCTCCTTCCTAACCCCATAGCT Gene GeneID:536811|JPH1:XM_002692704:112_cdna UTR3_Alt 2 NULL GeneID:536811 14 GENE JPH1 NULL junctophilin 1 EMBV3_34717 CCATGTAGATAGAGACATTTTACCCTTTGAAACAGCTGCGTCCCCAACCTGTTGCCATTG Gene GeneID:338437|SOCS2:NM_177523:19_cdna UTR3_Alt 2 NULL GeneID:338437 5 GENE SOCS2 NULL suppressor of cytokine signaling 2 EMBV3_18028 AGAAGCTTTTCTTGCTGGCGTGCGACAAGGTCCGCAGATGCACTTTTGGTGGCAATCGAC Variant GeneID:282100|TRPC1:NM_174476:12_cdna 183^337 3 EMBV3_13093 GeneID:282100 1 GENE TRPC1 NULL transient receptor potential cation channel, subfamily C, member 1 EMBV3_15216 TCTTGGATCCCGCTGCCCTTGAGTATTGACACTGACATGGAGGACCCTGTCTCATCCTAA Gene GeneID:535119|CIAPIN1:NM_001015659:360_cdna Constitutive 0 NULL GeneID:535119 18 GENE CIAPIN1 MGC140539 cytokine induced apoptosis inhibitor 1 EMBV3_11040 CCTGGGAGTACCCATCGCGGCCGCTTCACGGTGTTACCTGCATTCATGTCCAGCATGGAA Variant GeneID:613626|MDP-1:NM_001164221:260_cdna 323^516 3 EMBV3_34372 GeneID:613626 10 GENE MDP-1 MGC133592 magnesium-dependent phosphatase 1 EMBV3_16711 AGAAGGATATTCAGCGAAAAGTCTGTCTATCCCCAGGTTCTCTGGATCCTGCTTTCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28299 ATGTGGAAGTGGCTAGGAGAATTACAAATTTCCTTGGGTTGAGTTTTCCTGAGATAAATC Gene GeneID:507643|CLCA1:XM_002686283:131_cdna Constitutive 0 NULL GeneID:507643 3 GENE CLCA1 NULL chloride channel accessory 1 EMBV3_37004 AATCCCAGTGAAGGAGGTGACACCCAGTCAGGGGTCAAACTTGTAACTCAGAGGAGCTGA Gene GeneID:515660|NUBP2:NM_001034505:177_cdna Constitutive 0 NULL GeneID:515660 25 GENE NUBP2 MGC129129 nucleotide binding protein 2 (MinD homolog, E. coli) EMBV3_36391 AGAAACGTCCAATGGCATTTATCCAAGGATCTACAGTGTACCCAGCGTTCGCCAGGACGC Gene GeneID:100139151|LOC100139151:XM_002693886:192_cdna Constitutive 0 NULL GeneID:100139151 16 GENE LOC100139151 NULL hypothetical protein LOC100139151 EMBV3_26800 GTTTACCTTCTTAACCTCTCTTCATTTGGGCCACTCCCACGGTCATCAGCTTTCACCTGG Gene BVV0102_300922 + 0 NULL GK000011.2:13443885-13446594 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024112 TCONS_00024115 TCONS_00024111 TCONS_00024121 TCONS_00024119 TCONS_00024118 TCONS_00024114 TCONS_00024113 TCONS_00024110 TCONS_00024120 TCONS_00024117 1 XLOC_014444 Coding TCONS_00024111 XLOC_014444 Coding Coding TEX261 11:13438303-13445958 j TSS17776 2561 1 TCONS_00024111_2 238 0.206559937524405 7 0.666318264959498 0.00154544734074085 0.00135846707160892 0.00143785407013278 0.000122258604019031 0.000437732850474566 0.000234980952773898 0.000260112728946056 0.00114712496458616 3.58187181212386e-11 0.000670797996061105 0.000423977021739645 1.22556207081835e-53 8.21723226751656e-05 1.87030783608173e-09 1.58763178690424e-37 8.18838479280454e-07 8.08586624148129e-05 0.000725318188896865 0.000555321433623001 0.00125283956276884 0.000431375771757446 4.34447495817329e-06 2.49888830544664e-08 1.86678003350256e-11 0.00122125876161329 0.00137441821114791 0.00241350204188899 1.29520181638761e-13 4.15677172279151e-11 6.59426881565593e-60 XM_005212525.1 TEX261 PREDICTED: Bos taurus testis expressed 261 (TEX261), transcript 0.0 3689 100.00 0.798125732135884 NM_144582.2 TEX261 Homo sapiens testis expressed 261 (TEX261), mRNA. 0.0 1121 72.12 0.793049590003905 TCONS_00024111_2 sp|Q62302|TX261_MOUSE TX261_MOUSE Protein TEX261; 9e-115 331 99.40 0.701680672268908 1 coding 1 0 1 0 -0.45057533942978 0.0145323130582678 -0.0196405107151518 0.814093576845025 GGGGGCGCCATGTGGTTCATGTACGTGCTGAGCTGGCTGTCGCTCTTCATCCAGGTGGCCTTCATCACACTGGCCGTCGCCGCCGGACTTTATTACCTGGCCGAATTGATAGAAGAATACACAGTTGCAACCAGCAGGATCATAAAATACATGATCTGGTTCTCCACAGCTGTGCTGATTGGCCTCTACGTTTTTGAGCGCTTCCCCACCTACATGATTGGCGTTGGCCTCTTCACCAACCTTGTCTACTTTGGCCTCCTCCAGACCTTCCCCTTCATCATGCTGACCTCGCCTAACTTCATCCTGTCGTGCGGGCTAGTGGTGGTGAATCATTACCTAGCATTTCAGTTTTTTGCAGAGGAATATTATCCTTTCTCAGAGGTCCTGGCCTATTTCACTTTCTGTCTGTGGATAATCCCGTTTGCGTTCTTCGTGTCGCTCTCGGCTGGGGAGAACGTCCTGCCCTCCACCATGCAGCCAGGAGATGACGTGGTCTCCAATTACTTCACCAAAGACCTCCCACCCGGACTGGCTTTGCTGCACCAGGGCTCTTTTTCCATGTTTGGGTCTTGCCCTTCCGAAGGGACCGTTCTTGTGGCCCATAGTGGGAAGGGGACGGAGATGAGGAGCCGAACCTGGTGGGGGGATGGGGAGTGGAAGTGGAGGCAACCTTTCTTAATCCCCTTCTCCCTTCTTCCGTCTCTTCTTTCCCCTGGGGCTCTGTGACTGCCAGGCTGGAGGCAGAGAGGGGATAGTGTGAGACTGGGTTAGATTTTTAGGAGAACATGTATAATATCCTATTTGTAAGTCTTGTCGTAGGGAAGAGGAGTGGTTTCTGGCTGATTTCTGTCTTGGGCTTGAGGAGAAACAATAAAAATTGGCTTCCAGGCAGCCTGGATTACAGCCTGTTGTGTAAGAAACTGGTGGTGGGAGAAGCTGTCTGTTACTCTAAGAGCACACAGGGCCGGCCCTCTCTTCCGAGTGGTCATGGCTCCTAGGAGGTGAGTGTCTTCTAAGAAGACAGGCCAGGTCCTGGGCATAGGGCAGCATTTGTCGACCTTGCACTCCAACTCTAGTGCCTTCCAAGTCCTCAGCAGTGTGTGTGGGAATGAAGTCCCGTGGGAGCCATTACTGGCATGTCCTGTACCTCAGAGCAAAGCAGGCAGGTGCAGAGACGGACAGCACGCCTATGGTACCGTTCAGCCACTGGGAGACCTCTGTGCTTGAAAACCTTGTTTCTACCTCCTGCCTCCAGTCCCACCATAGCCCTTCATTTCCTTGGCTTTAGTATTGGCTTTCTCTTAAAAATAATCAGCCTTCCCCTTTCCTGGGGAGGAGCAGCCATTTTGGCCTCCTCTCAGTGGTGCTGAGATGGCCAGGCCCTTCTGTCCTATGCAGACAAGGCAGGACAAGGTCAAGGAGGCTGGAGGCCAGTGTCCTGACTGCTGGCCAGCAGCCGGCCTTGCTGTCCCTTGCTGTCTCTTTCTCACCAGTGGCAGCTTTGCCCCTCCATTCACTCCACTGCTTGTGTTCCAGGGGTTGCCAGCAGCCTTGTGCTAAAAGTCCAGTGGACCCTTTTCACATCTCTTTCTGCATCTCTGCAGCGTTGGGCAGGTTTCATCACTGCCAGCTTCCCAAGCCCTTTTGTGGCTGGTTCTCCCTCTCTGCTCCCTTCCAGGCCAGTGCAGGCTCCTCCCCTCGCCCTGTGCACAGAGTTCTATCTTGGGTTCCCTGGAGGAGCCTGTCCCTGCTCACGGCTTCAAGGAATTCAGAGCTGACCTCCAACCCCAGCATCCCTTTTGGTCCTCTGAACCACAGTTCTGCTGCCTTTGGGCACGCAGACAAATCTTGTAGCCCAGATAGCACTTGTTGCTGTCTTCTGCATACCTGCCTTTTTTGGGTACCTGCTTTGGCCCGAAGATCACTCAGGAGCCCAACCAAACACCTGGTTTCTCTTTCTGCCCAGACGTCTAACAACTGTCAAGTTTACCTTCTTAACCTCTCTTCATTTGGGCCACTCCCACGGTCATCAGCTTTCACCTGGATTGTTGTGACAGCCTCCTTTGGCTTCTCTATCCCACAGCTGGAGTTGTCTTTCTAATGCATAGTTGATCCAGTCACTCTCTGGCTTACAACCTTCCATGGCTCTCCGCTGCCCTCAGGATAAAATCCAGACCCCTTAGCATGGCTCGTGAGACTCGTGGAGTCTTGGTTCCTGCTTGCCTCTCTGGCCTCTTCACGGGCCACTTTGCACTCTGAATTTCAGCCTCCTGTATCCAGAAATGCCCCGTTGCTTCTCCTTCATTTTACTCACCTGGGTACCTTCTCTGTCAGTTCTCAACTTAGACTTCACTTCCTCCAAGGAACTCTGAATGTCCCGTCTCCCTCCAGCACACCACACAGATGACTCTGGTCTTACTTGCCTGCTGACTGCTCTGTCTCCCCACTAGACTGTAAGCTCCTTGAGGGCAGGGACTGTCCAGTTTTTGTATCAACAGCGCCTAGCTTGGCACCTGGCACATAGAAAGTACTCAATAAATGTTTGTTTAATGAGTGATTTG EMBV3_35995 AACACCTGCAGTCACAAGTTTGGCTTCTACCAGGTCCTTCTTCTGGGAGCTTGAACTGTC Gene GeneID:539997|MPEG1:NM_001046464:14_cdna Constitutive 0 NULL GeneID:539997 15 GENE MPEG1 MGC128490 macrophage expressed 1 EMBV3_09436 TTCCACAGCGCCAACAGCAACGCCGACCACAAATCCATAACCATCAGCCTTGTTCAAAAC Variant GeneID:510233|FAM175B:NM_001166587:27_cdna 92^182 4 EMBV3_17971 GeneID:510233 26 GENE FAM175B KIAA0157 BRISC complex subunit Abro1 EMBV3_28223 GAGCTTTCCTTATCAATCTCAGCTTATCTTGCACCAGAGGACACACACAGGAGAGAGGCC Gene GeneID:783562|LOC783562:XM_002695523:362_cdna Constitutive 0 NULL GeneID:783562 18 GENE LOC783562 NULL similar to zinc finger protein 371 EMBV3_17306 TCCCGCGCCCCGCCATGCCGCTCTACTCCGGGAATGACTGTACTAATGATGGGGTCAGCA Variant GeneID:505106|USP14:NM_001075189:44_cdna 340^518 1 EMBV3_00334 GeneID:505106 24 GENE USP14 MGC140678 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) EMBV3_13484 CAGGAAGGAGCAGAAGAGCTGCAGAAAATGCTTCAGGAAGATGAGTTGCGAGATGCAGTG Gene GeneID:518601|ARF4:NM_001034530:193_cdna Constitutive 0 NULL GeneID:518601 22 GENE ARF4 MGC128059 ADP-ribosylation factor 4 EMBV3_22431 TGGGAGTAGAGCAGAAAGGAGGTGAGGAAAAGCTAGAGGCAATCCAAGAACCATTGGCAG Gene GeneID:527118|LOC527118:XM_002688741:75_cdna Constitutive 1 NULL GeneID:527118 7 GENE LOC527118 NULL similar to mCG5922 EMBV3_15923 GCAGCAAAAAGGGAAAAGCAGAAAAGATAGCATTGCATTACTTTCCAGAATACCAGTGGC Variant GeneID:510378|TMEM161B:XM_002689384:31_cdna 278^375 1 EMBV3_06222 GeneID:510378 7 GENE TMEM161B NULL transmembrane protein 161B EMBV3_08301 CCAGGAATCAGACCCATGTTCCCTGCATTGGTAGGTTGGATTCTTCTCCACAATACCACC Gene BVT0102_131204 + 0 NULL GK000030.2:143167263-143365489 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42101 ACATCATAATCAAGTTGCTGAAAGCCAGTGATGAGGAGAAGACATTTTAAAGCATGTAGG Gene BVV0102_106311 + 0 NULL GK000019.2:42580238-42602484 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11301 ATTTCTTTACATGGGTCTGTCCCTGGGTTGGCTAAGGGCTGAACTGTGTCCCCTCCAATG Gene BVV0102_327464 - 1 EMBV3_41532 GK000018.2:40467459-40563246 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01845 CTGGGAGTCGCAGCGGTGGTTTGGGACGCGGTGCTCATGTGACTATCACGGATCGAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28293 TAGGGTGCAGATATTAGTGTTCCAATAAGCATGTGATTATATTAAGGTGGTGGTAGCGGG Gene BVT0102_136677 + 1 EMBV3_43693 GK000018.2:18730221-18745673 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082502 TCONS_00082503 TCONS_00082499 TCONS_00082500 TCONS_00082501 1 XLOC_051028 Coding TCONS_00082499 XLOC_051028 Coding Coding PAPD5 18:18715169-18732499 = TSS62221 3887 1 TCONS_00082499_4 467 12 0.776386404293381 0.000739076430204197 0.000560909540283643 0.000613020327795986 0.0002879333885601 0.000367555267210501 0.00010850719175125 0.000420560043629539 0.000441411736690423 0.000989908956353353 0.000978832779719793 0.000284466014674376 0.000145778572019776 0.000328814766822102 0.000184403740677374 0.000470699578729352 0.00388675189281265 0.000685415546619349 0.00117149793327701 0.000266650224222744 0.000379441458041418 0.00013888338593787 0.001155242564378 0.00105695737980826 0.00175744469054451 0.00048348522175207 0.000831277107207851 0.000572077933533062 0.00063480791741635 0.00053626500975654 0.000394747215537549 XM_001256515.5 PAPD5 PREDICTED: Bos taurus PAP associated domain containing 5 (PAPD5), 0.0 6937 100.00 0.989194751736558 NM_001040285.2 PAPD5 Homo sapiens PAP associated domain containing 5 (PAPD5), transcript 0.0 5701 92.58 0.989194751736558 TCONS_00082499_4 sp|Q8NDF8|PAPD5_HUMAN PAPD5_HUMAN PAP-associated domain-containing protein 5; 0.0 936 98.90 0.967880085653105 2 coding 0 0 0 0 -0.0306104328472735 0.836633976681913 0.0344284669304343 0.704012866390197 ATGCTCCAGACCTTGAGCCAGCCCTGCACTCGCAGTGATCTTCTGCATGAAGAAATCAGTGATTTTTATGAATATATGTCTCCAAGACCAGAGGAGGAGAAGATGCGGATGGAAGTGGTGAACAGGATCGAGAGTGTGATTAAGGAGCTCTGGCCCAGTGCTGATGTCCAGATATTTGGAAGTTTTAAAACTGGCTTGTATTTACCTACAAGTGACATTGATCTTGTGGTATTCGGGAAGTGGGAAAACCTACCCCTCTGGACCCTGGAGGAAGCTCTTCGGAAGCATAAGGTTGCAGATGAAGATTCGGTGAAAGTTCTGGACAAAGCAACTGTACCTATTATTAAATTAACAGATTCTTTTACCGAAGTGAAAGTTGATATCAGCTTTAATGTACAGAATGGCGTCAGAGCAGCTGACCTCATCAAAGATTTTACCAAGAAATATCCTGTATTGCCATATTTGGTTTTAGTATTGAAACAGTTCTTATTACAGAGGGACCTTAATGAAGTATTTACGGGTGGAATTGGTTCTTATAGTCTCTTTTTAATGGCAGTAAGTTTCCTTCAGTTACATCCCAGGGAAGATGCTTGCATCCCCAATACAAACTATGGTGTTCTCTTAATAGAATTTTTTGAATTATATGGACGACACTTCAATTATTTAAAGACTGGCATCCGGATAAAGGATGGTGGTTCCTATGTGGCCAAAGATGAAGTACAGAAAAATATGCTAGACGGCTACAGGCCATCCATGCTTTATATAGAAGATCCTTTACAACCAGGTAATGATGTTGGAAGGAGTTCATATGGGGCCATGCAGGTGAAACAGGCCTTTGATTATGCCTACGTTGTCCTGAGTCATGCTGTATCACCAATAGCAAAGTACTATCCCAACAATGAGACAGAGAGCATATTAGGTAGAATAATTAGAGTAACAGATGAAGTTGCCACATATAGAGATTGGATATCAAAGCAGTGGGGCTTGCAGAATAGGCCCGAGCCTTCATGCAACGGTCCAGTGTCTTCCTCTTCAGCCACACAGTCCAGCTCTAGTGATGTTGATTCCGACGCGACACCATGCAAAACCCCGAAACAGCTGCTCTGCCGTCCGTCCACTGGGAACCGGGTAGGGTCGCAGGACGTGTCCTTGGAGTCCTCTCAGACAGGCGGGAAGATGCAGAGCACCCAGACCACTAACACACCCAACAGCACCAACAAGTCCCAGCACGGATCAACAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACCCAAACAAGCCATGGTTCCTTGATGACAAACAAACAACATCAAGGGAAATCAAATAATCAGTATTACCATGGCAAAAAGAGGAAACACAAGAGGGACGCCCCCCTCTCAGACCTTTGTAGATAGTCGGCGTCGTGCGACGGACTGTCTTCTGTGTGCAATGATCTCACGCGAAGGACAGTTGGATAGGGACTCCTGGGAGACATTCGGGAGCCTTACCCTGTTCAGACGTTGATTTAGCAACTGCGTTTTTTCCCAGCTCGCCACGGAATGGATCATGAAGACTGACAACTGCAAAAACAAAAAGCAAGCAAAAAAGGGGGAAAAAAAAGGCTGCTCATTTGATAAGTCATATGCTATAACAGGGTCATTTTAAGATTTAAAGCTTGAATGTAAAATAAATCTATTTCTCATTGGCTTTATGCAGAGTTATAGGGGATAGTATTCAGTGTGGGTAGGGTGATAGACACAAGAAAATTTCAGAGGATGGGGTGGGGAAGGAAAACACAGGTATCATATAGGAAGTCCAAATTTCAAAGGGGAAAGTGATCTGTGCATGTTTTTTTTTTTTTTAATATTTTTGCATATATTTACCATTTTATTGTGTGTATATATAGATGACCATATAGGAAATTGATATTTGTAATAGTGGATTTGTTAATACTTTTTACATAACATTACTGTTTAAATTGTAAACAGATTTTTCTCAGGATTAGTTTGAAAAATAATCTGAATTGTCATCTTAACATCCATCTATAGGGAAGTGATTAGTTCTATTACTCAAATTTGTTTCCTCAGCATTGAAATGACTTAATAGAACCCTCGTGACCTGCTGCAAAAATTTTCCTCTAAAGAAAAGGTTATGGTGGCAAATGACGTTTATTTTATTTTGTAAAAAAAGAAAAAAAAATGTACTATGTACTTTTGTGTAAACACTGAAAAATCTCTAGTCATCTCTAAGAATTAACTTGCAACTGTTTTCTATAGTGCTGTCGTCTTGGGCAGTGGGCAGTTACATGACTTCGTGTTTGTTTCCTTTGCAGTCTTTTTTTTTTTTTTTTTTTTCTTCCTAATAGGGAAAAAAAAAAAAGGCCACCCGCATCTGGTCCCATTCCTGTTGCAGTGAAACCTCGAGTTCCACAGACTTTGCATGCTGGCTCCTCTAACCCTGTGTGCTGCGTGTGCTTGTTTTTCTCATCTCTTATTCTTTTTTAAATTCATGCTTAACAACTGTGGGAGAGAATAACTGTAAACAGCTTTAATTAAATCATACTTATAAAAAACTATTTTCTTAAACTCCACTTTATGCTTTTGGTATTGTTGATCTTTAAAAATTAAATGGTCTTTGATAATGGATCTATTTTGTATTGCCTTATTAAGACCAAATACTTCTTGTCATCCCATTCTTTATCCTCTCCTTTCATGGAATTGTTATCTTTAATTAAAACTTTTTTAAACATTGGCTTGTTTCAATCATACTGTAAATTTTGGTTGTGGTCAGTTTTGAGTGCAAATGAGATGTATCATTCTGTTATTCATCACGTGTTGAGTTTGAAACTCAGTTGGAAATACTTAATAGAATGTAAGTGGTATTTCTGAAAATGCTTTCTTTCAAGGTGAACGCTTTTATGTTTAGCATCAGTGTCTGTGGCTCTGTTAATTACAGCCATTTCTGAGATGAGATTCTTTTATATATATATATATATATATACATATAAAGTACTATTATTGGCTTTTAGGAATTTCTTTTATATACGTTTATGAAATACTGAAGACCAACCAGACCGTTAATGGACACTTAGTGCAACTTTTTATAAAGAAAATAATGCTAAAATAAGACCAAAACTGATGTCATCACTGAAATTAACAGTTTTCAATATGTTCATATTTTAATTCACAATGGAAAAATGTGTTCCAAAACTGGAAATTCATAATGCTTGTGTAAAGCGTGGAAGATTTTAAATACGATGTTATTTTGACAATGTTTGAAATTTTAGAGTCACATTTTATTCTGATCAGAATTTTTATCAAGATGTTGAGCTTTTGTTTTTTTGAAACTAGTTTGTCATAACATATTGTGCATAATCACAGTATTTATTTTCTAGGATTATTGTGAATGTGTAGACTTATGTTTACTGCTAAGGGAACAATTATTTATAAAACAATATTAAATCCAGTATTAGCTGCCTATTTCAGACACTTAATACTTGCAGAGACCCATGTTACATTTACCACACTGAAGTTTTGTTTTGTTTTGTTTTCAAGAATCACCTTCATTGTTGAAAGTAAATGTACTCTTAGGGTGCAGATATTAGTGTTCCAATAAGCATGTGATTATATTAAGGTGGTGGTAGCGGGAAGATAATCTTGATTCCATTGGGAATCTTAGGTTTTCGTAAATTTATTGGGAAAATAGTTTTTCCTGTACTGCTGACGTTTCTTTTTGGTAAACAGTATCTTTCTAAAAGAAAAGCATGAAGGAGAAATTGAGGTGTGTACATTTCCTCAAATGACCAGCATTGTATTCGTGAATACTGTGTATCTTGCAATGAACAGTGTGGAAGCTGTTCATTTTTCAACCTGAAGTAAAATACTTTCAAGAACTTTTA EMBV3_17067 AAATCCCCTGTGCCTGGAAGCCATCTTCCTCCAGATCCTAAAAATGTCAACACTGCCGTG Gene GeneID:100139502|LOC100139502:XM_002692300:1687_cdna Constitutive 0 NULL GeneID:100139502 13 GENE LOC100139502 NULL hypothetical protein LOC100139502 EMBV3_07276 ACTGTAGGAAGCAGCAGAAGGAATATAAGAAAAAGGTAGCAGCACTGCCCAAACAGGAGG Gene GeneID:509292|UBA5:NM_001101067:22_cdna UTR3_Alt 2 NULL GeneID:509292 1 GENE UBA5 NULL ubiquitin-like modifier activating enzyme 5 EMBV3_21148 CCCGGTGCGCCATAGTACGCGGTAGCTGAAGCCATGGTCCATGCATGACCACCTAGATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28582 AGCGAGCTCCTGGGCATCCCGCTGGACCAGATACTCCTTTTTTGTAGCAATGGGCTACCT Variant GeneID:541284|MBOAT1:XM_002697548:326_cdna 289^512 1 EMBV3_05758 GeneID:541284 23 GENE MBOAT1 NULL membrane bound O-acyltransferase domain containing 1 EMBV3_25984 GGTGAAAGAGAGAACACAGAACCACAGCAAGTAGGGGAAGGAATTGTGGAACCTGCAGTC Gene BVT0102_150749 + 0 NULL GK000014.2:70334128-70399570 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052211 TCONS_00052213 TCONS_00052210 TCONS_00052212 TCONS_00052215 1 XLOC_031400 Coding TCONS_00052211 XLOC_031400 Coding Coding UQCRB 14:70329326-70336950 j TSS38782 3585 1 TCONS_00052211_1 79 0.316317991631799 5 0.530368621277712 0.000443027029519611 0.000118537628083118 0.000811312205517459 0.000336094096309169 0.000543321754076223 3.08377984729485e-05 1.23053525536681e-05 1.92851801593038e-08 3.98403880007812e-07 0.000189056741793548 2.35666210612791e-05 3.20162687328301e-05 5.18690742492172e-05 0.000252784925107022 2.02429129541451e-07 0.00367387158169136 7.19520741893189e-07 0.0052603649649112 0.000486286714071362 0.000695656841133394 0.00047483135168698 0.000635035662918045 0.00296281977284185 1.82256541374627e-06 2.87378535346647e-06 1.32112213128888e-05 0.000782005180876137 5.15420830132861e-08 0.000447264108454403 0.00102232105914104 XM_005215677.1 UQCRB PREDICTED: Bos taurus ubiquinol-cytochrome c reductase binding protein (UQCRB), transcript variant X1, mRNA. 0.0 1256 100.00 0.193863319386332 NM_006294.4 UQCRB Homo sapiens ubiquinol-cytochrome c reductase binding protein (UQCRB), transcript variant 1, mRNA. 0.0 785 82.55 0.220641562064156 TCONS_00052211_1 sp|P00129|QCR7_BOVIN QCR7_BOVIN Cytochrome b-c1 complex subunit 7; 1e-50 158 100.00 0.987341772151899 1 coding 0 1 1 1 0.111396512240347 0.312221994595621 -0.0485647461517659 0.618481290398864 CCCTACGCGCCTCCGACGTGACGCAACGCGCCTGCGCCCTGGGCCCGCTCGACCTCTAGGACTTACCCAGGAGGCAACGCTCTGTGTAAGGTCAATATGGCGGGCCGGCCAGCTGGCTGGTAAAATAACTGAGGCGAGTGGCCGGAGGAATCAGGATTGGAAGCCTCGCCGCACCTCTCTCGCGCTTCTCAAACGGAATTTAGAGGCAGCTGAGTGAGTGAGGGTTACGACGAAGCTTCAGTTTAATAACCTTGGCTTATCTGGAACATCCACTTGGTCTTTGGATTTGGAGACATTTGCATCTATTCTAGTTTCAGCATCAAGCAGGTGGCTGGAAGGTATTCGAAAATGGTATTACAACGCTGCCGGGTTCAATAAACTGGGCTTAATGCGAGATGACACAATACATGAGAATGATGATGTAAAAGAAGCCATAAGAAGGCTTCCTGAGAACCTTTATAATGACAGAGTGTTTCGCATTAAGAGAGCACTGGACCTCAGCATGAGGCAGCAGATCCTGCCTAAAGAGCAGTGGACAAAATATGAGGAGGATAAATCCTACCTTGAACCGTATCTGAAAGAGGTTATTCGGGAAAGAAAAGAGAGAGAAGAATGGGCAAAGAAATAATTCAGTAATCTAAATCTGTGGATACAGCTGTTCTCAAGTATTTTTATGAAGTTGGTTAAACCTGAAGTGTACAATGTAGAACTATTTGGGCTGTAAATGTATTACTTTAAATAAATATTATAACTATTGTTAGAGTTTTGGAGTTCTAAACCTTATTCTGAATAACTACTGAATTTATGTTGCTACTGTAGATAAGCAAGATATCTCGAAGCCCCAGCAGGGCCTTCCTTGCAAGGATGGAATGGGGCAAGAAACAAACACCAGGGACTTTGTTTTATCTGAAGTAAGTAGCACGGGGCTTCCCACGTGGCACTAGTCGTAAAGAATCCTCTGTCCAGTGCAGGAGACATAAGAGGTGCAGGTTCAGTCCCTGGCTTGGGAAGGTCCCCTGGAGAAGGAAATGGCAACCCACTCCATCCAGTCTTCTTGCCTGGAGAATCCCCATGGACAGAGGATCCTGGCAGGCTACCGTCCATAAGATCACAGTCAGACACGACTGAAGCGACTTAGCATAACATATATAAACAGCGCAGCAGACTGGCTCTCACACTTTGAAAGTTACTGAATGAAAGGAGAGAAGATTCAGCCCCTAGTTTGCCAGGATTGGGAAAGAGCCATTATCAACCACTGTTGTCCAAATAAATTTTGCATCCTATCTTTTTAAAAAAATTATGTATTTAATCCCAATATGGGTCTGTATAAGTTATATATATGTGCTCCTGTGCTAATATGTATTTCAGAAAATAAAAAGTAGACAATAGGCAAGACATTTTGTCCAGCTCCCAGTGACTTTTCCACTTAGGAAATGATCATTAAAGTCTATTTTGGGACTCCCCTGGCAGTCCGGTGGTTAAGATGCCACACTTCCATTGCAGGGGGCACAGGTTCAATTCTTGGTCAGGGAACCTAAGATTCTACATGCGTAGCGGTGCAGCCAAAAAAAAAAAATCTGTTGTAAGCGTTAGATAGTAATGATATTTAAAAGTAAAGCTATAGTCCAGTTACATGTTAGAACCATCCTATAATGTCATCATTCCCACCCCTAAATTCTAAAATGCTTATTTTGGTGAAAGAGAGAACACAGAACCACAGCAAGTAGGGGAAGGAATTGTGGAACCTGCAGTCTACAGTGTTCCATAAGCTAGTGTGTGGTACACCATCTCTAATTGGGATTGTCCCTTGAAAAAGTGTGAAAGACAATTTTTGTATTTAGAGGCATGCCTCAGAGATACAGTGAGTTCAAGTCCAGACCACCACAATAAAGCAAATACTATAACAAAACGAGTCACACAGTTTTTGGTTTCCCAGTGCATGTAAAAATTCAGTCGCTCAGTCGTGTCCAACTGTGACTCCATGAATCGCGGCACGCCAGGCCTCCCTGTCCATCACCAACTCCAGGAGTTCACTCAGACCCATGTCCATCGAGTCAGTGATGCCATCCAGCCATCCTATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAGCTCTTCCCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCTAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGACTCTGAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGTGCTCAGTTGTAAAAATTACAACTGTACAATTAAGTGTGTAGTAGCACTGTGCTTTAAAAAACCAATGTATGTACCTTAGCTAAAAGATTCTTGCTAAAAAATCCTAACCATCATCTAAGCCTTCAGCAAGTTATAAGATCGAAATCACTGATCACCATAACAAATATAATAAGTTTGAAATGTTTCAAGAATTGTCAGAATGTCACAAAGACGTGTTCCAAATGCTGTTGGGAATTGGCGCCAATAAATGTGCTGGACACAGGGTTGCCACAAACCTCCCATTTGTAAAGAAAATCAATACATGTGAAGCCTAATGGAGGTATGCCTGTAGTTAAAATTTCTGAAACAATCAGAAGTGGGTGTGTACATTTGACATATATTTTTATCACAGAGTGAGAGAAAATTATGACAATCATGTTTCACTTTAAATGGGCAAAAGATTCCTTCATTAGCGTGAGGTACTAGATTCAGCCACTAGGTGGTGATGCACTGCAGCTTGACTATTAAAAGGGGCACAGCACCACCGCTGCCGAAGATTTGTCCGTTCTGTACGCCCCACTCCCTCCCCTTCATTTTTCAGGATGACAACACCTTATGAGGTTTATGGCCATCAGGAGAATTTACTACTAAGCTATATACTGATGTAATGAAATTTAATATACGAGAGTAATGAATTATGGGATGTTATTTAGTTTCAGGATTTTATTACTTCAATCAGTTTTGACCATATTTCCTTTTATATGATTGCTCACTCTTTAAACATACCAGATGACTGTATAAGGAACACCTAATAAAGTCTAAAGATGTTAAAATACATATATTTTAATTTATTTGCCATAATTTGTTTAAATTCTGGTTATACTGGTGTTCATATTAAAAGCCACAACATGTTATAAGCTGAGATCTCAGGTCAAATGGTGCCTCTCAACTATTTTGCTAAGAAATTTCTTTGTATTTATTAACAACTGAGCAAGGACGAAGAACTGAATTGTTAAAAGTTTGTTAATTTTTAGCATAGATTACAGAAAGCTTGTTAGTATTTGAGTGGGTTATGTATTATGACAAAGTATTTAAAGTGTTATTCTGGATTCTGACTATATCTCACCTACAGTTGAAAAAAAATTATTATTTGCTTGACTTTGTATTTTAATATATTTGCCTATTTTGGCATAAATGCCAAAAATGTAATTTCAAAATAAATCCCTGTGAAATTTCTGCTAACATTCAATTGAATCATTGTTCTATTAGTATTCTAACTATTTTGAATAAAATTTTTATACATGCCT EMBV3_22066 AAACCAAAGCTGTTCAGTTGGATATCTGCTCGCTTCTCCCCGTCAGCGTCAGCCGGTGAA Gene BVT0102_015938 + 0 NULL GK000007.2:18970396-18980180 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34081 CGTCTGCAGCCAATCCAGAAGGAAATAATGCAGAAGCAAAACTCCACTACGGGAGACATG Gene GeneID:281845|IFNB1:NM_174350:77_cdna Constitutive 0 NULL GeneID:281845 8 GENE IFNB1 IFNb interferon, beta 1, fibroblast EMBV3_20182 ATGTTGAGAGCGCCGATGTACCTACAGTGTTTAAAAAAGAGGGGGAATCCGTGACCGTGG Gene GeneID:505232|LOC505232:XM_002690455:335_cdna Constitutive 0 NULL GeneID:505232 10 GENE LOC505232 NULL similar to T-cell receptor delta chain TRDV3 EMBV3_07204 TACCTCAGATGCATTTTGGCTGGAAGACTGTACCCCCGTTGAAAAGGGCAGCAGTGAACC Gene GeneID:537386|C25H16orf65:NM_001076094:368_cdna Constitutive 3 NULL GeneID:537386 25 GENE C25H16orf65 C16orf65 MGC134002 PDZ domain-containing protein C16orf65 homolog EMBV3_11132 GTGTGATACTGGCTACAGCCTCCCAAATGGTCAGAGCAACATTACATGTGGAGAAAGAGG Gene GeneID:519737|CFHR2:XM_002694268:268_cdna Constitutive 0 NULL GeneID:519737 16 GENE CFHR2 NULL complement factor H-related 2 EMBV3_03938 TAAAGGACTGTCCATCCTGAACTTCTCCTACCCCGTCTGCGAAGTGGATCTACCCAAGTT Gene GeneID:613856|LY86:NM_001083761:238_cdna Constitutive 0 NULL GeneID:613856 23 GENE LY86 MGC157074 lymphocyte antigen 86 EMBV3_28598 TGCAGAAATCTGTAATGACGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAA Gene GeneID:507792|GTF2IRD1:XM_002698181:695_cdna Constitutive 0 NULL GeneID:507792 25 GENE GTF2IRD1 NULL GTF2I repeat domain containing 1 EMBV3_39915 GCTAGCTGTGTCAGGAAGTGCTGCTGAGTTCATCCATTTATCCTGTAACTAACATTTAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03426 CTTGCAAGGACTACGTTTTAACGTCCACATCGCGGGCTGTGGCTAACTGAAGGAACCAAT Gene GeneID:515452|LOC515452:NM_001075714:91_cdna Constitutive 0 NULL GeneID:515452 29 GENE LOC515452 MGC140666 hypothetical protein LOC515452 EMBV3_05872 ACGTGTACAGTAACTTCCCGACAGTAATAGTGACCCTCGCCAGGAGAACAGTGCCCAAGT Gene GeneID:617678|PALLD:XM_002689443:35_cdna Constitutive 0 NULL GeneID:617678 8 GENE PALLD NULL palladin, cytoskeletal associated protein EMBV3_18495 AGGACTGCCCTCATGACCTCATCACCTCCCAAAGGTCCCACTTCCAAATACCAGCACTTT Gene GeneID:789857|ZNF286A:NM_001110443:132_cdna Constitutive 0 NULL GeneID:789857 19 GENE ZNF286A MGC157147 zinc finger protein 286A EMBV3_41859 ACGGTCACCATGTCCCCTCAGGTCTGTTCACTGATGATGCTTGGTTCGTACATGATAGGG Gene GeneID:782723|LOC782723:XM_002699192:59_cdna Constitutive 0 NULL GeneID:782723 29 GENE LOC782723 NULL similar to odorant receptor K21h1 EMBV3_26140 GACAAAGAGAAAGCTGGGAAACTCTATGATGACCGGGGGGAGAAGAACAGTGGGAAGCTT Gene GeneID:522347|MASP1:NM_001076968:87_cdna Constitutive 2 NULL GeneID:522347 1 GENE MASP1 MGC140512 RPIB9 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) EMBV3_02482 ATGTCCAGCGTTCGCGCCGCCAACAGCGAGGAGCCTCCATCGACCTAGAGAAGACATCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08220 TTGCAAACTCATTAGAAGGATCAAAGTACAGGAGGTATGCCATCAGCACACATTTGTAAC Gene BVV0102_031767 + 0 NULL GK000003.2:28879551-28948284 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01751 CTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGAAGATGACAAC Gene GeneID:538624|FRS2:XM_002687385:67_cdna Constitutive 0 NULL GeneID:538624 5 GENE FRS2 NULL fibroblast growth factor receptor substrate 2 EMBV3_42594 CGTTCAGCTCTCCGGTGGGACAGCGCATCGTCCCAAAGATGCCTTCCGAGCCGTGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00844 ACGTCACGCAGGAGGACTTTGAGATGGCAGTGGCTAAGGTCATGCAAAAGGACAGTGAGA Gene GeneID:282015|PSMC5:NM_174441:188_cdna Constitutive 0 NULL GeneID:282015 19 GENE PSMC5 NULL proteasome (prosome, macropain) 26S subunit, ATPase, 5 EMBV3_28964 AGACCTCAGACAAAAGATAAGTCATTAGCAAACCCAGACTGATTGAGGGTGGTGGGCCCC Gene BVT0101_029707 - 0 NULL GK000018.2:1951891-1967571 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085171 TCONS_00085172 TCONS_00085168 TCONS_00085169 TCONS_00085170 1 XLOC_051811 Coding TCONS_00085172 XLOC_051811 Coding Coding GLG1 18:1963176-2091098 = TSS63670 8321 1 TCONS_00085172_4 1184 26 0.935155291156261 0.00255392318817062 0.00249225885526661 0.00231057908824939 0.00157387202895011 0.00134063136648112 0.000933522865284557 0.0011039834257558 0.001089840765088 0.00222184644895277 0.000633494370413294 0.00026780001357043 0.000200240293999881 0.000182185590092939 0.000482122104699586 0.000310039972617113 0.0143684328003571 0.00612477827578122 0.00830426257629111 0.00185208730021313 0.00544102621850237 0.000630569063441476 0.00499550311506382 0.00546441909850373 0.00586681850176723 0.00404557909811362 0.00330584540389384 0.00235529212669651 0.00136820192212666 0.00141703539710929 0.00281935643935311 NM_001244140.1 GLG1 Bos taurus golgi glycoprotein 1 (GLG1), mRNA. 0.0 1.501e+04 100.00 0.999879822136762 NM_001145667.1 GLG1 Homo sapiens golgi glycoprotein 1 (GLG1), transcript variant 3, 0.0 5207 87.23 0.508833072947963 TCONS_00085172_4 sp|Q61543|GSLG1_MOUSE GSLG1_MOUSE Golgi apparatus protein 1; 0.0 2193 95.44 0.999155405405405 1 coding 0 0 0 0 -0.0503113293651565 0.678976383213817 -0.0451543003022486 0.625458965403175 GCGGACTCAAGATGGCGGCGTGTGGACGTGTACTGAGGATGTTCCGCTTGGCGGCGGCGCTGCCGCTGCTGCTGCTCGCGGCGGACGGCGCGCAGAAAATCCAGGGCCCGGGTGGCCACGGCCAGGGCCCGGGCCCGGGGAGCAACCTTCTTCCCCTCGGAGCGCAGCCGGGAGGCGGCGTGCTGCCGGGTCAGCTCCTGCTGCCTCAGTCATCTCAGTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCTCAGCAGCAGCAGCCTCAGCAGCAGCAGCAGCCGCCGTTCCCCGCGGGCGGGTCTCCGGTCCGGCGGGGCGGAGCAGGGCCCGGCGGGGCTGGCGGGGGCTGGAAGCTGGCGGAGGAAGAGTCCTGCCGGGAGGACGTGAGCCGCGTGTGTCCCAAGCACACCTGGAGCAACAACCTGGCGGTGCTGGAGTGCCTGCAGGACGTGCGAGAGCCTGAAAATGAAATTTCTTCAGACTGCAATCATTTGTTATGGAATTATAAGCTGAACCTAACTACAGATCCAAAATTTGAATCTGTGGCCAGAGAAGTTTGCAAGTCTACAATATCAGAGATCAAAGAGTGCGCTGATGAGCCATTTGGAAAAGGGTACCTGGTTTCCTGCTTGGTGGATCACCGTGGCAACATCACCGAGTACCAGTGCCACCAGTACATCACCAAGATGACAGCCATCATTTTCAGTGATTACCGGCTCATCTGTGGCTTCATGGATGACTGCAAAAATGACATCAACATTCTGAAATGCGGGAGCATTCGCCTTGGAGAAAAGGATGCACATTCACAGGGCGAGGTGGTATCATGCTTGGAGAAAGGCCTGGTGAAGGAAGCGGAAGAACGAGACCCTAAGATTCAAGTCTCTGAACTCTGCAAGAAAGCCATTCTCCGGGTGGCAGAGCTGTCCTCTGACGACTTTCACTTGGACCGGCATTTGTATTTTGCCTGCCGAGATGATCGGGAACGTTTTTGCGAAAATACACAAGCTGGTGAAGGCAGAGTATATAAGTGCCTCTTTAACCATAAATTTGAAGAGTCCATGAGTGAAAAATGTCGAGAAGCACTAACAACCCGCCAGAAGCTGATTGCCCAGGATTATAAAGTCAGTTATTCACTGGCCAAATCCTGTAAGAGTGACTTGAAGAAATACCGGTGCAACGTGGAAAACCTTCCCCGGTCCCGGGAAGCCAGGCTTTCCTACCTTCTGATGTGTCTGGAGTCAGCTGTGCATAGAGGGCGGCAGGTGAGCAGCGAGTGCCAGGGGGAGATGCTGGACTACCGCCGCATGTTGATGGAAGACTTCTCTCTGAGCCCCGAGATCATCCTGAGCTGCCGAGGGGAGATCGAGCACCACTGCTCGGGGCTGCATCGGAAAGGGCGGACCCTGCACTGTCTGATGAAGGTGGTGCGGGGGGAGAAGGGGAACCTTGGAATGAACTGCCAGCAGGCGCTTCAAACACTGATTCAGGAGACTGACCCTGGTGCAGATTACCGCATTGATAGAGCTTTGAATGAAGCTTGTGAATCTGTAATACAGACAGCCTGCAAACACATAAGATCCGGAGACCCAATGATCCTCTCATGCCTGATGGAACATTTATACACAGAGAAAATGGTGGAAGATTGTGAACACCGTCTCTTAGAGCTGCAGTATTTCATCTCCCGAGATTGGAAGCTGGACCCTGTCTTGTACCGCAAATGCCAGGGAGATGCATCGCGTCTTTGCCACACTCACGGTTGGAATGAAACCAGTGAACTTATGCCTCCCGGAGCTGTGTTCTCCTGCTTATACCGCCATGCCTACCGCACTGAGGAGCAGGGCAGGAGGCTCTCACGGGAATGCCGAGCTGAAGTCCAGAGGATCCTCCACCAGCGTGCCATGGATGTTAAGTTGGATCCCGCCCTCCAAGACAAGTGCCTGATCGATCTGGGAAAATGGTGCAGTGAGAAAACAGAGACCGGACAGGAGCTTGAATGCCTCCAGGATCATCTCGATGACTTAGCTGTGGAGTGCAGAGATATAGTTGGCAACCTCACTGAGTTAGAGTCCGAGGATATTCAAATAGAAGCCTTGCTGATGAGAGCCTGTGAGCCCATCATTCAGAACTTTTGCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATTCAGAACAAACACCAGAAGGATATGAACGAGAAGTGCGCCGTCGGAGTCACCCACTTCCAGCTGGTGCAGATGAAGGATTTTCGGTTCTCTTACAAGTTTAAAATGGCCTGCAAGGAGGACGTGTTGAAGCTTTGCCCCAACATAAAGAAGAAGGTGGACGTGGTGATCTGCCTGAGCACCACCGTGCGCAACGACACTCTCCAGGAAGTCAAGGAACACAGGGTGTCCCTGAAGTGCCGCAAGCAGCTGCGGGTGGAGGAGCTGGAGATGACAGAGGACATCCGCCTGGAACCAGATCTGTATGAAGCCTGCAAAGGTGACATCAAGAACCACTGCTCCACTGTGCAGTATGGCAACGCGCAGATTATTGAATGTCTGAAAGAAAACAAGAAGCAGCTGAGCCCTCGTTGCCACCAGAAAGTGTTTAAGCTGCAGGAGACAGAGATGATGGACCCAGAACTAGACTATACGCTCATGAGAGTCTGCAAGCAGATGATAAAGAGATTCTGTCCAGAAGCAGATTCCAAAACTATGTTGCAGTGTTTGAAGCAAAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGATTACCGCTTAAACCCTGTGCTAAGGAAAGCCTGCAAAGCCGACATCCCTAAATTCTGTCATGGGATCCTGACTAAGGCCAAGGATGATTCAGAGTTAGAAGGTCAAGTCATCTCTTGCCTCAAGCTGAGATATGCAGACCAGCGCCTCTCTTCAGACTGTGAGGACCAGATCCGGATCATCATCCAGGAGTCTGCTCTGGATTACCGACTGGACCCTCAGCTCCAGCTGCACTGCTCGGACGAGATCGCCAGTCTGTGCGCCGAGGAAGCCGCAGCCCAGGAGCAGACCGGCCAGGTGGAGGAGTGCCTCAAGGTCAACCTGCTCAAAATCAAAACAGAAGGCTGTAAAAAGGAAGTGTTAAACATGCTGAAGGAAAGCAAAGCAGACATCTTCGTGGACCCGGTTCTTCATACAGCTTGTGCCCTGGACATTAAACACCACTGTGCGGCCATCACCCCTGGCCGAGGGCGTCAAATGTCCTGCCTTATGGAGGCCCTGGAGGACAAGCGGGTGAGGTTACAACCAGAGTGCAAAAAACGTCTCAATGACCGGATTGAAATGTGGAGTTACGCAGCAAAGGTAGCCCCAGCGGACGGCTTCTCTGACCTCGCCATGCAAGTGATGACCTCCCCGTCCAAGAACTACATCCTCTCTGTGATCAGCGGGAGCATCTGCATATTGTTCCTGATCGGCCTGATGTGTGGACGCATCACCAAGCGCGTGACACGAGAGCTCAAGGACAGGTAGAGGCGCCTGGAGCCCCAGAGGAACTACCTGCCTGGCGCCCCGTTTGTACAGCCCTCCTGTATAGCGCACCCCTCACCTCGCCCTCCTGCGCGGCGGCCCCAGCACTCACGTTAGAGCAGCAGCAGGCGCCCACCGCCTCGTCCGCCGCAGACTCCTCCCGCGTCCATGGTGTCCTCCTTGACCACTCGTGCAGCAGCCGGCCGCTTTGGGGATCGCCTCTGTCGGCAGACTCGGGTTTCCCTGTCCAGAGACAAGTCTCTCATCCGGATGGACCTACCAGTACTTCCGGAACCAACTCACCTGACCTGCAACTCAGCTGAATTTTTTTTTTTTTTTTAAAACACCAAAAAAAATCTTTTTAAAGAAAGGAAAAAAAAATGTATATAGTAACACATCTCCTCCAGGCTTGATTTGAGCAATGGGGTTCTTTCTTCTGTGTGGCGGTGTAAAAGGAAGGCAGGACGTTAGAGGGGAGCACCTAACACACTGTAACCGGGATGTCTGGCTGACCTCTCAGAAGCACCTTTGGCCCCATCAGGGCCACGGACTTCACCAAGTAGCAGGAAACGACTGACCAGCCCACTTGGGGTCTTGTTTTCTTCTGCTGAAACAGTGATGCCTTCCGATCCCTACCCGAGCAGAGCCACTGCGGGTCAGGACCCACGGCCACGTGTCGCTCTGCCGTGCTCGCCCAGTGGGCCCCCTAGGCTGAGGGCGGGTGGGTTGGAGCAGGGCCCAGGGGTATGAGCAGCTCGTCCGTCCACTGCTCTGCACGAGAGGCTGGGCACCAGGGCCTGCCTTCCAGACCTGCACGGGGCTCTCCGCGTTTGGACTGGCCCTGCTGGGGTGGCAGTGCCTCCCTGAGTCCTCTGCTGCCGGGGGTGCCTGCGACCCAGCAGGGGGAGCCAGGGCGGGAAGCAGGGTGGGGGCAGAATCAGCCCACTGTGGTTCATGTTTCAGGCAACAATGCAGGTCAGGAACAGTGGCTTCTGCAGACGCAGCCTGGCCTCAGGGAGGGATGGCAGGCTGACCTTCCCACAGGCTCCGGGCCACCTTCCCAGACAAGCTCCTTCATACCTCTTCATGCAGAGGGCGTGGAACATGGTTCCAGTAAAAGATGGAGGCTCTTTCTCCTCTTTCCTTTCTGTCCGTTGGCTGCATCCCCCCACGGTAGTAGGCATTGGCTAAATGTTGTACTTGGATGATTCATCAGTCTTTGCTGAGTCTGAGCTTTGTGGAAACATTCCTGAGCATCGCTTAACCCTCCAGCGTAGAGATAACAGGCTTGGAGTATCAAAAGGGAGGCACACGGGCGTCACGGTTCAGCCTGGGGCACCTGGGCTTGAGTTTGGGGCACGGAATCCAGTGGCTGCACAAGAGGGCAGTGTGTACAGTAGGAGATATATTTATATAATATATATTTTATTAACCTGTTAGACGTCCACAGAGTATTATAAATCACGTGCCTAAAACTGCCCACATAGACCGTGCACCCTGCCTGGCCCCACCCTGCCTGGCCCCGCCCCGCCTCGCCACTGTCCGCGCGTGCCGCGGGCCCGCCCCCTCTGTCTTCCCTGGAACGTGTTCAGGACAAATGGGTCAGCTGGTCCAGGTGGCTCCTCGTCTAACCCTGACGGACGGATATTGGAATACTGATACTGTGGTTTGCTTCTTTCTTTCTCCTTTTTGCTACTCTTGCTGGAGGCAGTGGGTTCCAGGCGCCAGCTGCAGACGCCCCCTGCCTCGGGCACCACCAGTCACCAAGGGCGGTTCTAAGCTGACAGGTCCCCTCAGGTCCTGCTCTTAAGGTCTTCCCGATTCTCAGCAGCTGTCTTGCGGGTCTTCTGTCTCATCACATTTGAACCTCTTGGAGTTGGAGCACCACCCCTCCTTCCACCCCTGTTGCACTAAACTGAGCTGGTGGATGGTGCACCTCCTGGGGCTCCTCCCTTGCTCTGGGCAGGTGCTGAGAGCGAGGAACAGGGTTGTCACATGTACACAGGCCCCCACTGATGCGTGTGACGTGCTTTACAGCACAGAATAACTTCCCATCTGATGGGGGGGCTTCCATTCTCCTCCTCTGCTGTCTCCCTCCCCACGTGTGTAAAACATCACCACAGCTTACTGTGTCTTGATGCTTTTCTTTCTGGACTGAGAGATGATCTCAACTGTCTGCAGCAGATCTGGAAGTTTGAAAAAAAGTTTGGTTCTTGAAACATCCATCACCTTGAGAAATGATCTGGATAGATAGAAGGTATAACTCTGCCGGTATCTTTGATCGCTTGTTGCCAGAAAGCATTTCACCATCCAACTTGGAGTAGTTTCCTATGACTGAGCAGTTTCATACATCATCAGAAACTATGGCCCAGCTATGTCCATTCTGTACCTCATTCGGTATGACAGAAACAGGCTCTGAGCCGCCTCTGGTCCCTGGCTTCATAGGTCACTCTTGGGTAAATCAGCTAGGCAAGAACTAGGCAAGAGGAAACCATGGCCCTAGTGGGGGAGCTGACGGCCCTCTTGCTCTGTCGTCATCTGATGTCTAGCCCATCCAGGAACAGTTACATCAGCAGCAGGTACGGTTTTGGGTCAAGACCAAGGGTCCATACCCTTGCTGAAGATTACGGTAACCAGGGAACTCATCAGGCCTCGTCCACTCACTCGAATCTCAGAGATGCCGACCGAGTATCTCCACAGCAGTCCAGAGGAGCCGGGAGGTCAGTTCTCTGGTCTGGCGGCCCTGCAGTGCAGGGAATCAGAAATCTGAATAGAATGTGCAGGACGAGGCTGACTGCTCCCCCTCACGGAGCTTCTCACACACAAGGCGGCTGTGGAGTGAGGTCTTGCCCTGCACGTCCCTGGCCTTCCTCCGCTATCGCTGCTGTCCCAAGAGAAGTCTGCTAGCGAGATGCTCCAAGACAGGCCTGGGTTCACTCCAGCAGGAAAGCCCCCCTCCTTAGCATTCCCTGACACTCTGGTACCACCCACAGGCCCAGTTCTGTGGACCCCATCAGTTTGTTCTGAGCCAGTGCATCCTTAAGAGGCAAGGGGAATTCTAGGATTGAGTGAGCAGGTGTTGACTGTTACTCACTGCGGCCCTTGACTCCCATCCTGCACGCACTCTTCTCAGGGATGCTGGAGAGGGAGGGAGACTCTGCTTTCCTAGAAGATGTGACAGGAAATTTGCCATCAGATTTCATCTGTTCCCATTTCCTGAGGTCAGGTAACAAGAGAAACTAGTAGTGAAGACTTGTAGCCTCCATTTACATTTCATCAGACAGGGTGCTGACTTCCCTCCCCCTTCCCAGGAGAAGATTCACTCCTGTGTGCACCACCTCCAGGCTGTGGGACCACTGTCTGTCCCAAAGATCCCCACTGGTTTGAGTCACCCGGGGAAGGATCGGTTGCTTTGTGGGACCTCCTTTCTCAGCTGGTCTTAAGTTCCTCTGAGGAAAAAAGCCTTTGCTTTTCCCATTTCTTTCCCTCCCCCACCAAAAAGTAAGTGTTCTCCGCATATTGCTTATTCCACGCAAGCACGTACAGGGAAGGAACCTGCAGTAGGGACCCTTAGAAGCCATCCAACATAGCCTGACTCATTCAAACTAAATTTGGGCCATAGAATAAAAAGAACAGGGTTTTTTGAATCGTGCATTTTGGTGTGTTTACTTGTATTTCCAATTCTTAGGAAGTTGAAAAATCTCAGAACTCCTTTTATTTACTCTCACCATTTGGACAACACCTAAGTAGTTTTATAAAATGCAGCATTCCAGTGCCCCGAGTTTCCCTGTGTCTTTGAGGACCTACCACTTCTGAATCACCGCTCCCCCACTGGTCTTCAGCTCCCAAAGGACCAGGGGCTGGAGCTGATGTTCTGGTTGGTAGGTTTCTGTCTCATCTCTGCTTGGCCATCTCTCCAGCTAAACTCCGCTTGGTCCTCCTCTCCCCCAGGACCAGTGTCACATGTCAGGCAGGGCAGTCGAGTTCGAGGCCCAATCCCCCTTCATGCCCAGACCTCAGACAAAAGATAAGTCATTAGCAAACCCAGACTGATTGAGAGTGGTGGGCCCCTCCATGCCATCTAGTGAGATCACTGAGGAGACCCAGGGGCTGTTGGTCACCTGGAGCACAGAGGTGGGACTGTCTGCTCGGGCTGGTGGTGACAGGATCCTGGTGGTGGTCTCCTCCCCGTCCTCCTTCCCAAGACCCCCCACAGCACACGTGTAGGGGTATGGGCAGCCGTGCGATGGAGGAGTCTCCCTGGGCAAGGCGGGAACTCAGACAGTGCCTCTCTATTCTGTTTTGCCTTCCCCCAACACTGATTTGACACCTGGACCCCAGAGCCCAGCGGGCCCTGTGCCGCACACACTTGATGGTTTGAGCAGGTTCCCTGGCCAGAGTGAGTGACAGGAGGGCTGGCAGCCCGAGGCTTACTGAACGTCCTCCCCACGCAGTGTTTCCGGGTCAATCCAGGCTGGAAGACAGACTGTCCAGCAAATGCTGTGTGAGATCTTAGGCCTTTAAAAACTGGTGTGTTTTGTTTTTTTTTTTTAGAAGGAAAAAAAAAAAGTAACAAGCCTCTTTTGTAAATGGTTTTTCTTTCTATGTATAAAATCCTGGCAGTTCCTTGTTTTTACATGTTCATGCTGTGTAATTTTGAGATGTTACCGAGATTCTGAACATAATGTGCATTTTTTTTTTCTGTACAGATGAAATGGGAGAATTTAATAAAGAGTTTGCAGGTTTTTACTTGTTAAA EMBV3_20803 TGCCCCTACGTGCACAACGTCACGCGCAAGAGCCATGTCCCAAGTGTGAACATCCTCGAG Variant GeneID:618296|POLR3K:NM_001046617:20_cdna 121^208 1 EMBV3_30963 GeneID:618296 25 GENE POLR3K MGC137052 polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa EMBV3_11833 CCTGCAGGCGGGCGCGAATTCACAAGTGATTAATCCAATTCCCGCGGGCGCCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_32343 AGCTTTTATCCGTGGGGAAGCAGCTGAAGGCATGTATGGTGATGGGGAGGACAGGTTGAA Gene GeneID:538669|TRAPPC3:NM_001076120:239_cdna Constitutive 1 NULL GeneID:538669 3 GENE TRAPPC3 MGC142405 trafficking protein particle complex 3 EMBV3_17423 CCGCGGGCCGCGGGGCCGTCGCGGGCCCAAGAATGCACAGATGGCTATGAGTGGGACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02334 CGAAACTATCTCTTACGGTTCTTCCGAAAGTACTTCGCCAGCCGCTTCTGCAAAGGCTGT Gene GeneID:497017|CCR5:NM_001011672:80_cdna Constitutive 0 NULL GeneID:497017 22 GENE CCR5 MGC137803 chemokine (C-C motif) receptor 5 EMBV3_05403 CATACTGGACCCGGAGCCGAAGGAAAACAGGTTATTAAACCCGAATCTTGTGTACCATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37262 AACGGTGAGGGAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATACAGTAGGCGCCCA Gene GeneID:787596|LOC787596:XR_083839:498_cdna Constitutive 0 NULL GeneID:787596 13 PSEUDO LOC787596 NULL similar to KIAA1219 protein EMBV3_14046 GGTGAACGGTGGACCCCAGGGAAACCCCGTCTGGCTACATCGCTGTGGACGAGGTTCGGG Variant GeneID:524059|PTPRT:XM_002692322:89_cdna 336^451 1 EMBV3_23467 GeneID:524059 13 GENE PTPRT NULL protein tyrosine phosphatase, receptor type, T EMBV3_12722 CAAATTTTCAATGAAAGCCAGTACCGTGGGGAAGCAGAAGCTCAGGCAAAGCAGCAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29011 TGTCTAATACAGGGGCCAACCCATCTGTGCCCATCGTGTAAGTATTGCCTGTGGCTGTCT Gene BVT0102_303719 + 1 EMBV3_20229 GK000020.2:9919738-9930158 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114434 TCONS_00114429 TCONS_00114427 TCONS_00114428 TCONS_00114435 TCONS_00114431 TCONS_00114432 TCONS_00114433 TCONS_00114425 TCONS_00114430 TCONS_00114426 1 XLOC_069292 Coding TCONS_00114425 XLOC_069292 Coding Coding BDP1 20:9927543-9976686 j TSS85362 7048 1 TCONS_00114425_5 1470 24 0.857067274429205 3.92760046174331e-16 7.46414823869857e-05 4.53409403673038e-16 9.33290600117555e-05 4.61369930115237e-05 3.54117026646912e-22 3.0201194403314e-05 3.63444911851774e-11 0.000195724966993478 0.000841252732770994 1.20572664407722e-08 0.000346682351510894 0.000258883251872004 0.000491474302286744 4.97513606530836e-44 0.00137561877958119 1.13388081524136e-38 0.0030529571712257 4.72215051874963e-05 6.16995040424083e-05 1.47327186433698e-06 0.00128071086568698 3.81872138703869e-06 5.83055680069542e-06 9.01297506661394e-05 7.59268769367352e-05 6.99687156074002e-05 0.000362047629759702 0.00038226075184567 0.000343293752241368 XM_005221444.1 BDP1 PREDICTED: Bos taurus B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB (BDP1), transcript variant 0.0 6536 99.73 0.517593643586833 XR_241785.1 BDP1 PREDICTED: Homo sapiens B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB (BDP1), transcript variant 0.0 2524 79.87 0.399545970488082 TCONS_00114425_5 sp|A6H8Y1|BDP1_HUMAN BDP1_HUMAN Transcription factor TFIIIB component B'' homolog; 0.0 1539 59.14 0.999319727891156 0 coding 0 0 0 0 0.047702353196713 0.699904892852446 0.0383494390250654 0.415537762558189 CGAGTGATGTCACTGTGGAAATGGAGACTGATTTGAAAGAAACTGAAGAAAATGACATCTCTCCCAGGGAGAAAATGCCAGAAATGAGTGATGTCACTGCAGAAATGGAGACAGATTTGAAAGAAACCAGAAGAGAGATTTTCCCAAGGGAGGAGATAACAGTGGTGACTGATGCCACTGAGGAAAGAAAGACAGATTTGGAAGAAACTGAAAGAAGAGAAATGTCCCTACAGGAAAATGCCCCAGAGGAAGTTGATACTATCGGGGAAGTAGAAACAGATTTGAAAAAAACTGAAAGAGAAATTTCCCCAAATGAGGAGATAACAGAGATGCCTGATGCTGCTGAGGAAGTAGAGACAGATCTAGAAGAAACTGATAGAAGAGAAATATCTACACAAGAAAATGCCTCAGAGGTCAAAACTGTAGGTGACGAAATGGAGATAGATTTGAAAGAAATTGGAATAGAAACTTCCCCAAGGGAAAAGGTATTAGTGGGGATCAGTGCCACAGGGGAAAGAGAGACTGATTTGGAAGAAACTGGGCAGAGAGACATTTTCCTGATGCGGAAAGCATCAGCAAAGGTGGCTGCCGTTGAGGAAATAGAGGCAGATTTGAAAGACACTGGAAAAGAAATTTCCTTGACGAAAAGCAGATCAGAAGAGATTGAGAAAAGCATGGCAGATTTGGAAAACATAGAAGAAATAGACATTTCTCTAAGGGAAAAAGATCCAGAGGACACTGGGACCTCAAGTCGAGCTGAGGCAGATCCCTTGCAGACCAGTAGTGATGACTCCAGCACTGTGTCTTCACTGACTAATAGATCTTCGGAACTTGATAAAGTAGAAGACCAGAGGATGCGACCTCCAAGTGTTCCAGAGCAGTTTTCAGATATTAATTTAAGCAAATCTCTTCCTCAAGAACAGACGCCATGTGAAATTAAGCTGACACCTTTTGTGAGAAGTAGATTCAAAAGACCTAAACCAAACTTAGCAAGAGCAGCTTCAAAAAGAGAGACTACGAAAGCAGAAAAGCATGCACCTGGGAAGGAGGCGGAAGCTGGTAAAACAGAGACGGTTGTGATACAGCAGAACTGTGAACAAATGAGTACTTTCCCTTCTCAACATGATGTGGCTTCTCTAATGACATCAAGAGAAAAAGACAAATTAGATCACGGTCCAGAGGAGACTGTGATATTACCATGTGTGCAGACCGAAAAGGACCTTTCACCTTTGAGTTCTTGTGAATCTAAAGAGGAGTCTCAGTCCACACAAGCCCAGGAAAAGGAATTACTTGTTTCTATGGGGACTCATAATATAAACACTTTTGAACAAGGAATAAAGGAAAGGGTTATCCAAACTGCTCCACTAGTAAGGGGTCGACTTCAGAGACCCAGACCAAACTTAAGAAAGGCTGGCCAGAGACAAGTAATAGAAATTAGTGAAACCAAAGAAACAACTAAGGAAGAAAAGATGCTACAAAAAGATGAAACTGGAGAGAAATTCCTGACTGTGCCGAATTCTCAAATTGCAACCGAAACTGAAGTTGTATCCTCTGAAGTGTCAGAAGGCAGAGTGTCTGAAAACCAGAGCCACGTTCTTTTAGAAAACCTTCATATTAACAAGGTAGATGTTTTAGGTGAAAAGATGAGACATGGACATGAAACGTATGTTCCTAGTCCACCGCAAATGATAAGAAGACAGTTCCAAAGGGCTACGCCAGACTTGGGAAGAGCACAAAGTAAGAAAGAAGCATCAGACATAGAAGAAGACAGAGCAGATCAGAGGAAGGCAAGGAAGCCAGAAGACAGTTTGTCGCAGCATGAAGATTCTGACAGCCAGCTTCTTCAAAAAGGAAAACCTGAGTTTCTGACATCTCTGGAGGTTTCAGCAAGAAAAGATTCTGTAGGTTCCAAGGAGACTGAATTGGCAAAAAAAGATGATCAATCAGAAGTTGAACCATCTGGAAGTGTTGGAGAGAAGACTGGAGAGGATAATTCTGTGTGTGCAGTTGTTGAAAAGCAGTGTGTCAGTAAACCAAGCTCCCCTCAATTGTTAAAAGAACCAGATAACTCTAAAATTGCTCTGGATCGAAGAAGAGCGCTCTCTTCTGCCTCTGAGCGTGAGATAGATCGTAGTAGAAGGAGAGTACGTCGAAAGGTTAAACCCAGCGTCCCCAAAGGGCGTGGCTCAAAACGAAGCCGGACTAAGACTTCTAAGAAGGAGCCCAGAGCTTCCAGGTCTGTGCTGGTGACTCTTCGAGCTTCCCAGGAAGAAGACGAAGATGATGGTGAAGACTTTGACTATGAAGAAGAAAGCTATCATCTTGCTCCTGAAGAAGTAAACAAGGCTCCAGTGTTTGTACCTATTGGTCTCAGATCTCCCGAACCCGTTCCTGTTCAGATTGAGGAAACTATGGAAGAGCTTGTAATCCCCACGAATGTCACAGATGTAGGATGCATAACTGTTGTTGAACATCAGCTTTCATCGAACATAGATGTGATTCCTCAAGAAATGAGACAAGAAGAAAATTTGAATACATTATCAGTTGAAATGACCGTAGGTGGACATTCCCAAGCTGAAACAGAAAGTACCAACGATGGGAGCACTGAAGCTGCCATAACCCTACTGACTATGGGAGATCTGGTGCTGCAGTCAGAGATTAGCCCAGAACAGAGTGATGGAATATGTATACTTCCTGATGCTCATTCAATCGATCAAAGCCATATTCCTTTTAGCCCAGATAATGTAAATCTCAAAACTGTTCATGAATGTCAGGAACCTTCTTCATCTGTCCATAGTACATCTCCATCAGTAGAAGAAAACAAGATTGTATTGGATGTGGATAAACAGAACACTAAAGAAGAAATTGGTTTGACAGAAGAAGTAAAGGAAAATACTATATCATCCAGGACTACAACTTCTGAAGTGACCAATAATTTGAGAAAGAGAAGTAGATTTGCCAAGCCCAAGCCAAATCTTAAGAAGATTTTAGGGACCAAGAGATTTGGTGCTCATCAGAAAGTTCCTAGTTTGTTTGTAACTAAAGGAGAAGAAGTGGAAATTCAAAGAGAAACTGAGAAAAATGCTTCTCAAGAAACAGCATTAGAAGATAAAAACCTTGGGTCAGTTACAGCAACAGAGAGTACAGAGCAGAGCAAGGTGGCATCTGTACATGGTATTGAAGAGACCAGTATTTCACAAGAAACACACCTAACTGAAAGAGGTGAAGATCAAGAATGGAGATCTGAAGAAGTTCCGATATCATCAGTTGCTCCAGCTGTTTATTCTGAGTCAGGGCCCCATACAAGTGGTTTGGGCATGGGTCTTGGTGAGAGTTCTGTTGAAGAGCCTCTGGGAAAGGACTTTAATGGAGACCCTGTGCTTACACTAAATGTGCCAAAGTGTATACCAACTGGTATTCCAGAAGTCCAGCAAGAGAATGTAAACGATCTTCAAGACCTAACAGTCAATCTAGTTAATGTACATCAGGATGGTGAGGATGAACAAGCTTTCATTTTAACTCTGGTGGAAATCCCAACTCATGCAGTAGAAGAATATGCTGATAGCACTGTGCAGTTAATGCCAAATCCTTTACTGCCGGCGCCCATATTGGTCAAATCAGCGAATACAAAAGAAAGAGAAGACACGAGGAAGAGATATCATTGTAGCCTTGATGAAAGTGACCATGTGCCTCCTGCCAAAAAAACTTCACTCACTTCAATAGATGATTGTCAAAAATATACCTCTGAGGTGTGTTCAAAGGAATTAACAGATGTTTTGGAGGAAACAGGGGAGTCTTACAAGGGACAGGATATTTTCCCTACCTCAGGAAACATACAGACAATTTCAGAACCTCAGAAAGAGCAACTTGAACCAGCTTCTCAGAGTATCAGATCTGGATCTCTTGATAAAATAACAGATACACAAGAACAGAATGCATCTCAGTTACCTCAGGATGAGACAATGGTGTCTGATAAGGAAGAAAGAACTTGTACTGCTTCTGAGTCTGAACAAATGGGTAGCATCACATCGTCTTCAAACCGCCCCCTAACCAGACCTGGCAGAAGACCCCTGGGATTTTTGTCTTTAATATGTTCAAAGAATAGCTTGGACTCTGATGAAGCTACACAGGTTCATAGTAAGAAACGCCTAAAACCTGTTATACCTGTATCAAGACAAAATTTGAAAAGATCTAATCTGCCTAGTGTAAGCCAGAAAAAAACTCAAGAGTCCTCTGATGTTCCATCTCCAAGTGTTGTTGACAATACTCAACCTACGAATAATGATGGTTCAGCAACTCAGGTTTCTCATAATCGTCCCTTACCAAAAGGAGAATGTAAAGGTGGCCAAAACCGGGTGCCTGAAGAGGAGCCAACCACAGTCTCTGAATATTTCTTTAACGATATCTTTATTGAAGTGGATGAAACAGAATAGAAAATCGCCTTTTTTATTTTCTTTTTAAGTCTAGGATTTCCAGAATCAGTTATATCAACAAAGCAGTATTTAGAAAGAAGCATCACTGGCAGTTTTTCTTTAGGTTGATTTTGAGTATTTATTCAGCTTGATTTGAAGCTTTTATAATCAGTGAAAAACATTGCTGGGGTCCTTGTCATTCTGATTGGCTCAGCATTTTGGAAATATCAACCAGTTAAGACTGCTTTCTCAGACAGAAATAACAGGTCTTGTTTACATTTTGACTCTTTCTGTATTGAACACACATGAACATCCTCGAATGTTGTGGATAATGTCTGTGTAAGTCACAGTGCTGATGTATTTGGAAGTGGATTGTATTTAACGTTTAGCGAACCTTTTGTGAAGGTTTTTTTATGTTTGCGTAGGGTTTTTGTTTTTGTTTTAGGATTTTGGGGGGTTTGGGTGTTTTTTTTTAATTTTTATTTTTTAGTATGGTGAAAGTCTTTTCATTTGCCTCTAAATATATGAAAGGAAATTGTGAAACTCCAGTTTAGTATGGTAACTGTTAAAAACTTTTCTATTATCATCTATTTGACTGAAAAATGTGTATTTTTCTAATTCATATTGATGTAACATTAGTCCTAATTGAAGAACTAGTATTTAAACTTACTATTTATAAAGATAAAACATCAAAAAGCTTATTTATTTTTAAATTTTTTATTTAAAAGAATATTCAGTTTTAATTTTTTACCCCTGAGATTATGGGTAAAGAAAGCATTAACAAATTTATGTTTGTCTCCTTTCCCGCTTTAATTTTAAAGATATTTAAAGTGATATAACTAAAGTATTTGAATAGTATATATGTTTGAATACATTTTTTTCTCATAGTTCAGTATATTGACTTTGTACTGTGAATTTTTTGTTTTTCTTATTTCTTAGATAATCTCAGGATTTGTATGGGAAAAAAAAACCTTAACCTTATTTATGAGGCAAATTTCCATACAAAACTCAGTCTCCATTACATAAACATATGCTCACATACACACATTCCTTTTTTAAAAAACAATTTCTTGTTTTCTTTCCCCCATTAAATTCTCCTTAAGGACCTAAGTATGTAGGTCTTTATGGACAGAGCATAATTGAGATGTTAAAAACAGAAAATAAGATCACAATAAGCGTTTATTAAGTCAGTGATTATCATCAATATGAATTTATGGGTTGGGTTTAAATTTTGAGATTTTGTGATTTACGTAGGTAATTCCTTTATCCACCCAAGCAAATCTTTGTGGTTCAAATTAAACTTCTGAAAAAACAGAATTATTCTTTTATATGAAAAGCCCTCTGGGTTGATAATGCCTTGGATCAGGAATCAGAAACATTTTCTGCAAAAATATTTTCGAATCCGTGGGCCAGATGCCTTCTGTGGTAACTACTCGACTCTGCCACTTCAGTATGAAAACAGCCACAGGCAATACTTACACGATGGGCATAGATGGGTTGGCCCCTGTATTAGACAGTAGTTTTCCTATCTTAAGGTGCTGATGTCATTACCTATGAGATATTTGTCCCGAAATGATGAGTTGTGCCTAACAAAGAAAACTGTTGATTGCATTATGAAATCAGTATTTCAGTTGGGAAGATATTCTAATGTCTAATTATGTTTGTAAATTGAAAATTATAAAAAATGGTGACCAGTTTTCAGGTTCACTAGTAAAACTGGATTTAGCTTGGCAAGTATAACGGTAATCCTAATGTATTAAAACAATTGATATTAGAACATTTCTTATTCATTGCCTTATAGTGAAATTTACAGTTTAAACTTTTTTGTCATAAAGGAGGATTTAGAAGGAAATTCTCTATAGATACGCATTTATTTATTTCATGTGATTAATATGTTACAAAAACCATGGTCGTAAATCACATTGCTATTTTAAATGCCGTTTTTATACATTTTAAAAGTCTCATTCTGAAAAAGTTTCTTTAGTTCATGTTAGTTTAGGTGTTAGGTTGTCATAGCTAAACTATGATTTTATCCCTTGTTTAATATAACTTTAAATGTGTTAACATCTGTCTCTTGTTCATCTACAATGAGTCAATTTTGTGGAAGATGTAACTTCTTACTGTATAAAGGATAATTTTATCTTTGGGCATTCATTGCATTAGAGAATCAAGTCAGCTAAATTCTCCTACTGTTATATCCTTAAAACTACTCTTAGAAAAAGAAAATCAGTGTAATTTACCTTACAAGGGGGAAAGACTTGTTCACACCTGTGTTTAATCTGACTCATATAAAGATCATGTGAAGAATTTGTATTTTATAAATTTTCAAAGAGATATGATTAAAGGTCTTTATTTTTTTCTTGTCTTTTCCTCCTGAACACTTATATCTTAGCAAGTGATCAACATGATGACTTAAAAGCCTAATTGTTGGTAAATGATTGAGGCACAGATAAAAATATGATATCCACTGCTTACCACCATGTTTTTTGAAATATAGGTCACCATGTATATTATCTTGCTTAAAGAAGTCTTTGACAAAAAGCAATATCTGTCATTGTAAATTTTCTTGTTCTAAAGAAAGCAGTTATATATTCTGTAGGTGTAAATTATGTAAATAAAAGTTATTTTATATTATT EMBV3_06056 AACTACGACAAGATCACGGTGACCCGGCAGCTGAGCGTGGAGGTGCAGGACTCGATCCAC Gene GeneID:539951|RIN3:XM_002696754:403_cdna Constitutive 0 NULL GeneID:539951 21 GENE RIN3 NULL Ras and Rab interactor 3 EMBV3_33906 AGAGAGCCGGTAACTTATTGTGCAAGGATGAAAGGTGGCAGCAGTAGCTTTGGGGAAAGG Gene BVT0102_254687 + 0 NULL GK000005.2:26759488-26769553 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194323 TCONS_00194326 TCONS_00194327 TCONS_00194322 TCONS_00194324 TCONS_00194320 TCONS_00194325 TCONS_00194321 1 XLOC_117721 Coding TCONS_00194320 XLOC_117721 Coding Coding SP1 5:26760109-26803592 j TSS145023 13608 1 TCONS_00194320_6 779 0.189961787184009 6 0.68718090244239 2.50153185782502e-11 3.97239562215631e-12 0.000368544863209772 4.3617907519754e-07 0.000136844655291959 3.60439490670161e-11 9.95120235981749e-05 7.27587113506872e-17 0.000148124426112716 1.5280303168618e-14 8.51996391379951e-13 0.000378082361500656 1.40578014262911e-08 0.000148476365515282 2.72865923444603e-09 0.00325429113294208 3.36029558588543e-06 0.0035561133891384 1.44309366103492e-77 6.15169598073351e-13 6.74819650255483e-12 0.0002529390972124 0.000706648022858412 0.0021181523994234 8.95234967378918e-05 1.14873207403096e-08 4.2188045049466e-05 3.91531960739263e-17 3.52875133159891e-09 7.21083032737722e-10 XM_005206194.1 SP1 PREDICTED: Bos taurus Sp1 transcription factor (SP1), transcript 0.0 1.359e+04 100.00 0.55379188712522 NM_003109.1 SP1 Homo sapiens Sp1 transcription factor (SP1), transcript variant 2, 0.0 8899 86.15 0.552248677248677 TCONS_00194320_6 sp|P08047|SP1_HUMAN SP1_HUMAN Transcription factor Sp1; 0.0 1342 96.02 0.998716302952503 3 coding 0 0 0 0 -0.0137592361231385 0.960482375141385 -0.0160790406288574 0.774314335615322 CTGAGCCTAGATCACATCCTACTGACCAAGATCACTCCATGGATGAAATGACAGCAGTGGTGAAGATTGAAAAAGGAGTTGGTGGCAATAACGGGGGCAATGGAAATGGTAGTGGTGCCTTTTCTCAGGCTCGAAGCAGCAGCGCAGGCAGTAGCAGCAGCAGCGGAGGAGGAGGGCAGGAATCCCAGCCATCCCCTTTGGCTCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAAAACAGCAACAACTCCCAGGGCCCAAGCCAGTCAGGGGGCACAGGTGAGCTTGACCTCACAGCCACACAACTTTCCCAGGGTGCCAATGGCTGGCAGATCATCTCTTCCTCCTCTGGGGCTACCCCTACCTCGAAGGAACAGAGTGGCAGCAGTACCAACGGCAACAATGGCAGTGAGTCTTCCAAGAATCGCACGGTCTCCGGTGGGCAGTATGTTGTGGCTGCCACTTCCAACCTTCAGAACCAGCAAGTCCTGACCGGACTACCTGGAGTGATGCCTAATATTCAGTATCAAGTAATCCCACAGTTCCAGACCGTTGATGGGCAACAGCTGCAGTTTGCTGCCACTGGGGCCCAAGTGCAGCAGGATGGTTCAGGTCAGATACAGATCATACCAGGTGCAAACCAACAGATCATCACAAACCGAGGAAGTGGAGGCAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGCTGTCCCCCTTCAAGGCCTGGCTAATAATGTACTCTCAGGACAGACTCAGTATGTGACCAACGTACCAGTGGCCCTGAATGGGAATATTACCTTGCTGCCTGTCAACAGCGTTTCTGCAGCTACCTTGACTCCTAGCTCTCAGGCAGTCACGATTAGCAGCTCTGGGTCCCAGGAGAGTGGCTCACAGCCTGTCACCTCAGGGACTGCCATCAGTTCTGCCAGTTTGGTATCTTCACAAGCCAGTTCCAGCTCCTTTTTCACCAATGCCAATAGCTACTCAACAACTACTACCACCAGCAACATGGGAATTATGAACTTTACCACCAGCGGATCAGCAGGGACCAGCTCTCAGAGCCAGACACCCCAGAGGGTCAGCGGGCTGCAGGGATCTGATACTCTGAACATCCAGCAGAACCAGACATCTGGAGGTTCACTGCAAGCAAGTCAACAAAAAGAGGGAGAGCAAAACCAGCAGACACAGCAACAACAACAAATTCTCATCCAGCCTCAGCTGGTTCAAGGGGGACAGGCCCTTCAGGCCCTCCAAGCCGCCCCATTGTCAGGGCAGACCTTTACAACTCAAGCTATCACCCAGGAAACCCTCCAGAACCTTCAGCTTCAGGCTGTTCCAAACTCTGGCCCCATCATCATCCGGACACCAACAGTGGGGCCCAATGGACAGGTCAGCTGGCAGACTCTTCAGCTGCAGAACCTCCAAGTTCAGAACCCACAAGCCCAGACAATCACCTTGGCCCCAATGCAGGGTGTTTCTTTGGGGCAGACCAGCAGCAGCAGTACCACCCTTACACCTATTGCCTCAGCTGCCTCCATCCCTGCCGGCACAGTCACTGTGAATGCTGCTCAGCTCTCCTCCATGCCTGGCCTCCAGACCATTAACCTCAGTGCATTGGGTGCTTCAGGAATCCAGGTGCACCAGCTTCCAAGCCTGCCCTTGGCGATAGCAAATGCCTCAGGTGATCATGGAGCTCAGCTTGGCCTCCATGGGGCTGGTGGTGATGGAATACATGATGACCCAACAGGTGGAGAAGAAGGAGAGAACAGCCCAGATCCCCAACCCCAAGCTGGTCGGAGGACCCGGCGGGAAGCATGCACCTGCCCCTACTGTAAAGACAGTGAAGGAAGGGGCTCTGGGGATCCTGGCAAGAAGAAACAGCACATTTGTCACATGCAAGGCTGTGGCAAAGTATATGGCAAGACCTCACACCTACGGGCACACTTGCGCTGGCATACGGGCGAGAGGCCTTTCATGTGTACCTGGTCATTCTGTGGGAAACGCTTCACACGTTCAGATGAGTTACAGAGGCACAAACGCACACACACAGGTGAGAAGAAATTTGCCTGCCCTGAGTGTCCCAAGCGCTTCATGAGGAGTGACCACCTGTCAAAGCATATCAAGACCCACCAGAATAAGAAGGGAGGCCCGGGTGTAGCCCTGAGTGTGGGCACTTTGCCCCTGGACAGTGGGGCAGGTTCAGAAGGCAGTGGTACTGCCACCCCTTCAGCCCTTATTACCACCAACATGGTAGCCATGGAGGCCATTTGTCCGGAGGGTATTGCCCGTCTTGCCAACAGTGGCATCAATGTCATGCAGGTGGCAGATCTGCAGTCCATTAATATCAGTGGCAATGGCTTCTGAGATCAGGCACCTGGGGCCAGAGACATATGGGCCATACCCATCAACCCTGGGATGCAAGGTAGCATGGGTCCAAGAGACGTGTGGGAGAGTGAGCCATGAGGCATTAAAAATGCATGGTGGTGGGAAGAATTGGGGGTGGGATACAAAAGAAGAGATGGGGTCCTGGCACCCACCTGTATCATCAGTACCTTCTTAAAGTGGGAAACATAGTGAAAATTCTGTTGGTACCACCTTTGGTGCCACCTTTGATGAGCATTTGTTTGACCCCAAACAGTTTCTTAACACTTCTTACCCCAGCCTCCCCCTTCCTGCATTTCCCTTCTCAGCTCCCCCATGATGGATCCCCCCCTTTCCTAAAGCCATCATGCCTTGATAAATATATATGATCATTGAAATACTTTTTAACAAAAACAGATTCTATATTATATATATATATATAAAAGATATATAGAGATGCATTTGCAGGGGTTGGCTGGGAGGAGGAAGGAGACCATTCTGTGACCAAAATACCTTGGTCATTTTTTTTATATTGCCTTATTTCCTTATGGCTGAGCCTTGTTGTGACACATCAAGATTTCTAATAGATGTTGTCTTGGCTTCCCACCAGATTAAGCATTTATATGCTCTGCTTTTAGTTTATATATACATACATAATGTTTTCCTTTCTTAATTTTGTCTTTTAATTTGGGATCAGCTTCTTGCACTCTTTCCCTGACTCAACCCTTTCTGTCTCCCCTTCTCTCGCCTGATCTCTTCATATTTTGTTTTTGGTAGTGGTCCCTGGATGAGGCACTTCTTTCATTTTTTAATAAAGTCCTTAGTCCCAGCAGCAGAATGGAGAAGCCTTGAAGCTCAGGCGAATGCTTGAGGTAGCTGTGAAGAGAGTGTTCAAAATACTACTGACGCAGGCACCCTTTTGGTGCTGGAGAGTCAAAAGCACCTCTCTCTTCATTGGCTGCTCTAAGCATCAGGAATCAGAAGTCTTTCTATGGAATTGTACAAGAGACCCTTTGAAAGTTATAGTCTGGGATCAGTTTGTCCAAACTGTGAAAAGATGGTCAAATAATAGGTAGGAGCTTTCAGTAGGAAAATGATGTGCTCAGAAGTGGAAGTGACTCAAGTAGTTCAGTTCAGGAGTTGGAGTGTTTGGACCTTTGTGCAACTTCTTCCAAGGTAGCTCTAAGCTTTGATGTGTGGGCTTCTGAGTTCACGTTCTGAAAGGAAATACACTTCCTCTTTTGAACATCTCCAGTAGTTGCTTTCCCATTATGTTATTACAGAGCATCAGCCAGTGACTCTGTTCTGGATTTCCATTCTGCAGAACTCCAGAGCATGGATCAGTGGCAAGGCAGTGGTTCTTTGATCTTTCCCCTTAACTCTTCGTAGGGTGGCTCCTGAGGGGAAAGGAAGTGCTCATGATCATGGGAATGATAGCCCAGAACAAAAAGAAATCTTGTCTTACCACTGTGGCTTATAGGGGAGACCAGGGAAAACCATCCTGCTTTTCTCCATGGCCTGATTCCTGAAGAGACTGATCCAAAAATTACAGCGGCAGGGAACTCTTAGTGCATTTGGCACTGAGATTTAAATGCAACCAGAGTTGTCCTCAAGGCCCAGCCATTAAAACATTGTCTCTCTTGACTTTCTGGTATCTCGTCAGAGAGCTTTTCACTGTGAGGAAGTGTGGAAATGGCTGTGTGTATGTGTGTAATCTGTTAGATTGGGGATAGGTTTTCTGTTAGCCAATACTATAAGAGACCTGCAATAAAAAATTACCCTAATCTGATAGAAAGTGAAGTGTTTGTGTATGACCGTGTGTGAATGTGTGTTCTCGCTTGTATATATCTACACACAGATGAGAAATTATATTTGAAATTGTTGGAAAATAAATCAAATTCAGATCAAAATGCCTTTCAGGCCCATTACCTAGAAATCTATCTTAAAACCTGGGTATGTTCCTGAGGTCATTGCTTTGCTTTTGCTAAACTAGTTACAATTATGAATGGGGGATATTCTACTGCACTTTTAAAAGAAGAAACTATTTTTGTGTTTGAAAGTGAAACCAACATCCAGATCTATAGTAGAGTCCTAATTCCTCTCATAATTTTGTTTACCTTGACTATAAATAGATGATGCCATGATTCTACTATATATTTTATATAAAATCTATCCAAATTAGGGTTTGGGTAAGTTTGTGTTGTTGTTTAACCTGAAATACAATAACTGTTAATATTTTAAACAAAAGCTCACTCCATTTGGTCCTTTGTCTGCAGACTTAATAGTGTTTTTGACACAGAAGCTATTGCAAGGAGCTTTCCCCTTATCAAATTGCATTAATACTGAAGTGAAAGTTATCTGCCCAGCCATTTATCACACTCTTTGTTCCCACTCAAAGGCAGAACTCTGAACATGTTATTTTATATCTGTAATCATGTACATAGGCATCTTCTGGAGGAAAGGGGCAAGATAACTCACTGGAGTGTGCAGTGTTTTGATAGAACATTTCAAGGAATGGAATCTTCCCCAGAATGAAATTACTAGATGTAATCTAGCTTAATGATGCTGAAGCTTATACACTTTTAGGTTATTTGATGATGGTTTTCTCTGGGATGGAATGCTGGTTTACCCCCAGCTCTTAGCACAAGCAAATTTATATCCAGTTCTTTCCACTTGTCCTAGTTCCTTCTCAACAAGGAAGCTCAAGATTCAGTATCTTGTTTGGCCCTAAAATGAAAGCCGCTACTGCTTTTATCTCCCCGCAGCAGTAAGTCAGTCAGTCTTTTCCACAGCACGTTAACCCACATTCCTTGAGTCAGGAGCTTATTGCTGAAAGTCCCTTCCCCTGAACTTTTTGCCAGAAGAAATTAGTGTAACTGACAGGCATATTGATTGTATTTTTTTTTTTTTCCACAAGTTGCTCTTTTATGTAACTTTCTAATGACCAAACCTTGTGGGGTTGGGGGTGCCCAGAGAAGTGATAATATTATTCCCTTATCCTTTCAGGTTGCCTGTTCACATATATCTGCTTATCATTTGATTGTCTCACTTTTTACCCAGAGCAGTAACAACCCACATCGTCTTCCTTCAGGGACTTCCCAGCGGGCACCCTGTTTATGGGTGCCATGTAGAATGCAGTGTAACAGATATTTTTCAGAATTCAGAATAGAACTCTTGATCCCAGAATGTATAGACTGAAGTGTTGGGTAAAGATTATGACTGGGGGAGGGTTAGAGACAAAGGCTGTAAATTACTATGGCTGATTGATTTATTTCTACTATATACATATATATATTTTTGCTTTTGTATATCCTATATAGGAAACTAAGCATTGTATTTTTTTTTTTTAACAAATCTGAGAAAGCACTATGAACTGCAGATGTTTGACTTTCAGAATATATTTTGTATTGTTAATATCTTCACATTGTGTGAATACTGGAAGCTGCAGATCTTTGCTAGGATGCAATAAATTTATACACTTTTTGAGGGGTTCTTCTGGGGGTGTTAATCAGGCCCCTGTTACGCTTTTGGGGAGCTCTGGTGCTAAAGTTTTCATTCAGTTGTAAGTACCCTGATGCCTTTTGGACCTTGGGATCAGATCAAAGGAGTTCTGATCCAGGTACCAAGGAAAATGAGGATAGTCTAGCTGCCTCAAGTGAGGGGCCCTTTGCATAGCTCTCCTTCCCCCTATTCAAGTACCCTCTTGGAGTTGGGAGGAGGAATGTGAAATCTCAGAGTTTCATCTCCCTTAGAAGAGAGCCAGTAACTTATTGTGCAAGGATGAAAGGTGGCAGCAGTAGCTTTGGGGAAAGGGAGGAGGATATGGCACTTCTCCAACCCCGGAAAACATTGCTTTTGAAAACTGCTGATAAACTATGGGTAGGTTATTACTTTTGTTTAGGAGCCTGTGTGCTCTGCGGTGCCTCTCTTGGCTCTACTCCTGGGGTACAGACCTCATCTAGGAGGATGAGGAGACCAGCTTTGAGGTTGACCTGTTTCTTTTCTTTGTCTGTCTTCCCTAAACACCAGCTCCCAGGAGGACATTAAGCAGCCTTAAGCTTAAATTCCTACTCCCTCTTGCCAATTTAGCTCACTTGCCTTAGATCGAAGTATGGGAAAGGGGGAAAAAAAATGGGAGTCCCTGGTTTCATTCACCTCCTAGGTCTTCTCCAGTTTGATTTCCCCAAACCCAGAAAGATTGCCTCCACAATGTTCATTTGAGGGAAATGAGTATTTTGTCCCATTTTCTCCCTTCCTCATTATCACAACCACAGCCTGCCTTGTCCCTGCTGAACAAGAAGAGGCATGATCTGTCCCTCAATTCCCTTTAATATCCAAAAAAAAAAAACCCATAAATAGGTCTCAAGTGAGGCTGCCGTGGGTGGTGAGGACTTTGTTGATACCTCTCCTGGGGTGTGTGTTTTCTCTTCCTCGCCTTCAGGAATTACACTGTGCCTTCTCCACAGAGGAATGGGATTCTCTACCCAGCCCCCCACTTTGCTAGCAGCTGCTCTTAAACAGTGTGCACAAGGGCAAGTCTTCATATTTCTGATCACCCCTTTCTCCCATTGGCATCCCATAGCTCTCACTTGGAATCTAAGGTGCAAAGATTTTGGGGAAAGTTGGGGAAAATGTGCTGAGATTGGTCTGAGGAGACTCCTTCTACACATACCAATGGCAGCTGCCCTAGGGCTTGCTTCCTCTTCCAGAGTCTGTCCTCCTCTGGGAGGAAGGGGCAGTGCTCCGGTCTCTGGTGCCTAAAACAAGTTTATTTCTCTCTCTTAACACTGGCAATAACCAGTCTCCATACCACTGTTGCCTTTTTAAACTTCTTAATAATCTCATGCTGTGTTTGTTGTTGGTTTCAATCCGATTATCACCTGGGCTGTGGGGAAATACTTTTAAATGCTCTCTCATCTTTCTTGCTCTTTTTTCCCCTTGATCTTGTGTATGTATGATGCTAATCTCTTGTCTTAGTTTCTTCCTGCTCTTTTGTATCTTACTTTCTTGTTACTTTCTTGTCTTTCCCCTGCCTTTTGTCTCTGGGTGTTTGGGGGCTTTTTTTTTTTTTTTTTTTTTTTGCCTTTTTGTACAAAGATTAGTTCAATGTATTCTGTAGCTCCTTTGTAAACCAATTAAAAAAAAAAGTTTTTTAATAAAAAGCCATGTCTCTGGTGTGTTGAGAGGGTTGGGATTGGGGAGAATATGGTTATAACTTCATATACTAAACCCAAAATGAAGTTTTCTAGCTACACTGTTAATACATGTTAATCAGTGCAGTGTCCTACACTTAACTCCCAGGTAAACAATTCATGACCAGATCAGTGTGCCAGGACTACACAGAAATGCAGCAGATCCAGAGGAACAGGGACAGTTTGAACTTTTTTTTCTAAATTAGCTTCTTTTTTGAAATATTTTTAAATTCAAAGGAAAGTTGCAAAGATAGTGCAGAGGGTTTCTATATTCCGCTTTCCCAATTTTCTCCGTTGTTAACATTATCAGGATATATTCTCCAAATTAAGAAACTGACATTGGTACATTACATTAGCTGAATCCTAGGCTTTGTGGGCTTTATCCGTTGATGTCCTTTTTCTGTTCCAGGATCTGTGGCAGGATACCACATTGCATTTAGTTGGTGTGTTTCCCTAGTCTCCTCTGTGACTGACAGTTTCTTAGTCTTATTGGTGACTTTGACAGTCTTTGAGAGTACTGGCCATGTTCTGTAGAGTATCCCCCAATCTGAATTTGTCTGATTTTTTTTTCTCATTGTTAGACTGAGCTTACAGGTTTTGGGGGGAGAAAAAAGTACTACATAGGTGAAATGCCCTCATCACATCCTATCAAGGGGTGTGTGATAGCCATGTTACATGGATGGTAAAACCTTTATCACCTGGTTAAGGTAGTATTTGCCTGGTTTCTTCACTTTCTCTTTCCCTATTCTTTGGAAGTGAGTCTGCTGCTGCTGCTAAGTCGCTTCAGTCATGTCCGACTCTGTGCAGCCCCATAGACGGCAGCCCACTAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACCCTGGAGTGGGTTGCCACTTCTTTCTCCAGTGGATGAAAGTGAAAGTGAAGTCGCTGAGTCGTGTCTGACTCTTAGTGACCCCATGGACTGCAACCCACAAGGCTACTCCGTCCATGGGATTTTCCAGGCAAGAATACTGGAGTGGGGTGCCATTGCCTTCTCCAGGAAGTGAGTCTAGCCCACCCTTAATGGGGTTGGTGGGAAGTAAGCTTCTGTGAGGAAACTGCCTCTTTTTTATTAATTTAAACTAGCAAGTACTCATGTATATTTAAGTGGGTGGTTATAATCCAATTATACAATATTTTTGTTGCTCACGTTGTCCCAGCTTTGAACATTGGAAGTGCTTTTGACGTCTGTGTCCCTTTGATATGTCTACATCCTCTTTTTTCTTGAGCACTTTTTGATACATAAGATGCTTCAGGCTCATACTGTATTTTCCCTGCCCCAGCCCTAGATTGGCCATTTCTCCAGGGAGCCTTTGTTCTTTTTATTGGAGAATGGTAGTTCGAAGCCAAGATCTAGCTCCAACATATTTTGCATTCAGTTAATACCAACCTGTGTCTAAAATGACTGAATCTGGATTATGGCCCCTTGAAACTAAAATTGAAGTTAACGCTAACAGCCTTTCCCATTTCCCGTCAGCCTGTGCTTTTACTTGCCTTCGTACCTATCTAAGAATCCTTGATTGATGGTTTATACTGTAACTACCAGCATTCTTGATTATTTTTGCTCATTTGACCCCTTGTGTCCACTTCATCAAAGCACTCAGTCATTTGATTTTCTTACGTAGCTATTTGAAATATAACATTTTAATGTTTGGCTTTACTGGAGGGGTTTTTATGAGGAGGGGCTGTATGTTTTTTGGCCTTAGGAGTCTTATGTGGCCCTTTAAATAGTTCTGTCAGCTATTCAGTCAGCAAACATTTATCGAGCCCTTACTATGTGCTAGGTTGAGGATAAAAGAAGTAAGACAGGCCCTGCTATCAAATACTTAATAGTCTGGCATAGTAATGTAGAACTGCAAGTTTCCTAGTCTTGACCCCATTTTTCAGCAGATAATTTGCTTCTTATTTTACAGAGAAAACAGAAGCATCAAAGTTCTTCAAACTTCCCTCCAATTTCCCATCAGATTTCCTCAAACTTCCCTCTCTTCTCACGTCTGCGTGTTCGCCAATACCAGTTTGCCCCCTTCTCCTAAGGAGAGAAGTGTTTTTCGTTTGCAGGGCCAAGCCTGCCACTAGTGCTCTCAACCTCATTTTCTTTGACTTCTTTTTGTTCTTTGTTTCAATAGTATTTTCTCCTTTTAAGTCTCTCCTGGAGAGACCTTCCGTCAGCCTATCATGGTGGCTCAGAAGGTAAGGAGTCTGCAATGTGGGAGACCCGGGTTCAGTCCGTGGGTTGGGAAGATCCCCTGGAGCAGGGAATGGCCACCCACTCCAGTTTTCTTGTCCAGAGCATTCCATGGACGGAGGAGCCTGATGGGCTACGGTCCATGGGGTCCCAAAGAGTTGGACATGACTGAACAACTAATACTTTTGACTTTTCAACCATGTTAAAATCTGCCTTTCTGCCCACCTCTCCCATTTTGAAAAGCCTCTGCTGCTGCTTCAAGCTGCTAACCTAATTCTTTGCATTTCCAAAGTGAGTGAGAGTTTAATTTTTCTCTTAGCCACCTGTCTGGCCATCGTTTACCAAGTCGCTCATCAGTACCAGCACCCTGGTTGCCTGCTCCAATGGCCTTTCAGCCCGTAGCCTCTTCGACCTCTTTCCAGCAGTGTGTGTCTCAGTCCTTTCTTCCCATGAAGTGTGAAACTGAGGCACTTCTGGTTTTCCTTCAACCTTTATATGTTTTAGTCTCCTTCATAGCCACTTCTTCCTCTGTCCCTGGAATAACTGGCATTCCCCATCCTGGGTCCTTTCATTACTCTCTCACCCCTGAACAAGTTGCATTCTCTCTTCTCTTTAGCTATTACATACATGTTGGTGACACCTAAATTAAAATCCCTCACTTTTTTCTCAACCTGGCAGCCTGCTTAGTAGATATTTTCATCTGAATGTCCCACAGATAACTCACTCAACATGTAAGGAAGAAAAATAATCCTTTGTGTTCCTTTCCTCACTTGCCATTAATACTCTTGATCATGTATACTTGAAATTTCAGAATCATCTTTTAATTCTCTTTCATCTATCAACATTCATTTGATTACTAATCCTGTCAATATTACTAACAGAGTGTATCTCCATTTTCCCCCTTCTTTTGGGTTTGGTTTTTTGGCCTCTGGGCTTGGAGGATCTTAGTTTCCCAATGAGGGATTGAACCCAGGCCCATAGCAGTGAAAGCTTGGAGTTCTAACCACTGGACCACCAGGGAATTCCCTCCCTCTTATTTCCACTGTCCTCGCACTCACCCTGGCTACTGCTTAGGTCTTGTAACTGATCTCCCTGAGCCTCAGTCGTCCATCTTTCACGTTGCCACCAGACCCCTGCTTAAAATCCTTTGCTTTTAGGAAAAGTACAACCTTTCCAGTCTGGTCCCAGTTTATCTCTAGTTGTGATTTTCAGCTTCGTGTCTCATACCCTTTTCTCCTGCTCAGTCTCTGCCCCTCCCCCATGGCCTGGCCTCAACACGCTTTTTGTGGTTTATACCTGTATTCTTGCTGCCTTTGTTCTTGCTGTTCCTTGGCTACAATAATCACCCTCCTTTTATTTGTTTTCAGTGTGATTACCTTGAGACAATTTACATATTCCTTTCTCTGTGAAACCTTTGGACACCTTTCTTCCCTTGTCTTCTCTACCCTGAACACAGTTTTAGCTTATTTGATCTTTCTGCTTGTGTAGCTCCTTGTTCATACCCTCTAGCTAGACATAATTTTCCGGTTGCTTATTGGTATTTTCTCCTGCTTTTCTAGACTGAGTTCCTGGAGGGCAAGAATCACATGTATTTTGTAGGTTCAGCATTTAATGAAATACCTTTTTTAAGACTAGGATCTAATATTTTTTGAGTTGAATGGATAAACTCACTTTAGCTTTGTCATCACTGGGGTCAAAAGTAAATTATTGGGCCACTACAGACTTTAATCAGGGGATCCTAATGAAGAGCTTTGTGTATGTGGAATCCAGGAAGCCTTCCTTCCTTTGCTTAAGTTCTTTCTCAGGACCTTCCTGATCCCCCAGCTCTCAGATCCTTACCCCTTTTCCTCCTCATCTCAGTTCTGAACTCTGCCCAGAGCATGTAGAGTTCCCATAAACCTGACTGGAATGTTTCTATATTGAGAGACAATATTTTTGCCTTGAGAGTAGTTATCCAAGGCTGTGGGTGAGGAGACTGCCTTCCTGCCTGCTCCTTACCTTGCTCTCCTCTGATAACTCCTGATGCAAGAAGCTCTTTTACCTTCAATTCCCCCCTCAATCCCAGACTTCAGTTCAGTCACCCAGTCGTGTCTGACTCTTTGTGACCCCATGAACTGCAGCACGCCAGGCCTCCCTGTCCATTACCAACTCCAGGAGCCTACCCAAACTCATGTCCATTGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTTGTCGCCTTCTCCTCCTGCCCTCCATCTTTCCCAGCATCGGGGTCTTTTCCAATGAGTCAGCTCTTCGCATCAGGTGGCCAGAGTATTGAAGTTTCAGCTTTAGCATCATTCCTTCCAATGAACACCCAAGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCTAGGGACTCCCAGGAGTCTTCACCAACACGAGTTCAAAAGCATCAATTCTTCGGTGCTCAGCTTCTTTATAGTCCAACTCTCACATCCATACATGACTACTGGAAAAACCATAGCCTTGAGTAGATGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTTAATATGCTGTCTGGGTTGGTCCTAACTTTCCTTCCAAGGAGTAAGCGTCTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCCCCAAAATAAAGTCAGCCACTGTTCCACTGTTTTCCCATCTATTTGCCATGAAGTGATGGGACCAGATGTCATGATCTTAGTTTTCTGAAATGTTGAGCTTTAAGCCAACTTTTTCACTCTTGTCTTTCACTTTCATCAAGAGGCTTTTTAGTTCCTCTTCATTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATACTTCTCAGTCCCAGACTTAGATCTGGCAAAGGAAGATAGTTGTAACTGAGTGCAGCATTCCATCTGCCTGGACTCCTAGAAGAGCCCAAGGAGGGATGGGCAGCTATCCATCAGCCTCAAAGCCCTGGTCATGCCTCTAGCTGCTGCTTCACACTACTGGGGCTTTGATACCCTCATGTAAGCTCCTCGGAAGACAGACTCCAGAATCATCCTGCATCTAAGCCAGATCATCCCTAGAAAGGGTTTCCAGGTAGCCACCAGCGGAACAGAAGGCTAGGAAAACAGGGAACCAGAATTCCTCTAATTCTCATGAGAGCCAGTTCCACAGTTTCTTCTGGGCAGTAATCTGATGGAGCTGGACTCCTGTCTCTCGATTGCGGCACGGGATCTACACCGCTCTCCTTCCATCTCCACGCTGATGTTCCCTCTACACACTCTGAGCCCTCCGGTCACAGTCTGCAGTTCCTGCAGCTTCATAGATACTGGAGATGTACTGTGGATATGAGTCACTCCAGGAGGCCCTTTCTGACCCCTCACTGTGTCCTGAGTTTCTCCTATGTTTGCTGACCTCTGGTGGTGATAGTTTGAACTGTACTATCTTTTTATAGTGGTTGGCTGACAGGTATTGGTACACATTTTCTCAGTCCATATTTAAATACTGTGTTAAAAGAAAATATTTTTTACTGCTGAATTTTGTATTTTCTTTCAGGCATCATGGCCATAAATGCAAAAAAAAAAAAAAGGGAAAACAGGACCTGGGCTTTAGAATCAGACTTACTACGTCCAATCCTAACTGCTATTTCCTGACAGAGTGACCTTGGTCAAGTTACCTAAATTCAGCTTTCTTACCTGTAAAGTGAAGATAATAATAACTCAATGGGAGAATTAGATGTGATGATTGTAAAATTCATAGCCCTAGTCGTGCCCTAGCACATAGGTGCTCAATAAAGTTTGTTACCTTTTCTATAATG EMBV3_35199 CCAGGAGCATAGATAAAAGCAAATTGGTAGTGCATCAGTTACTTTTCAGTGCACCACGAC Gene GeneID:533922|NAA30:XM_002690956:317_cdna UTR3_Alt 2 NULL GeneID:533922 10 GENE NAA30 NAT12 N(alpha)-acetyltransferase 30, NatC catalytic subunit EMBV3_21184 AGGTGGACCTAGACAGGCGGGCATACGCTGAAGTGGCCAACGCTGCAGGACCTGGCCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04888 GACTGGTATTGCAGCGGTGTGGATTGAGGGTAGCCTAGAAACAATAGCTTTGGCCAGATG Gene GeneID:282715|CABP5:NM_174728:65_cdna Constitutive 0 NULL GeneID:282715 18 GENE CABP5 NULL calcium binding protein 5 EMBV3_31345 CCCATATCATGAATTAAGCTGAACAAGAGGCTGGATGATTACATGGGGGTGAGACCCAGG Gene GeneID:514936|TMEM51:NM_001098975:124_cdna Constitutive 0 NULL GeneID:514936 16 GENE TMEM51 MGC152450 transmembrane protein 51 EMBV3_06732 TGACCACATTGGCACCTACGGTGCAGACTTCTACCAATCTCATGGTCCCTCTGGCCAGTA Gene GeneID:282534|BOLA-DQA1:NM_001013601:5_cdna Constitutive 0 NULL GeneID:282534 23 GENE BOLA-DQA1 BoLA-DQA histocompatibility complex, class II, DQ alpha, type 1 EMBV3_20093 GGCCGGGATTCAGAGTCGAAGGAAGAAGATACTGGATGTGTATGCCAGTGTGTGTGGTGT Gene GeneID:613947|EDAR:XM_002691277:346_cdna Constitutive 0 NULL GeneID:613947 11 GENE EDAR NULL ectodysplasin A receptor EMBV3_00227 AGAGACACAGCCGCCTAAGTCCCCAACCCACTTCGGTCTGAGCCTCGTCTTCTCTGCACT Gene GeneID:507493|ITFG3:NM_001075318:5_cdna Constitutive 1 NULL GeneID:507493 25 GENE ITFG3 NULL integrin alpha FG-GAP repeat containing 3 EMBV3_08734 TGTGTGCAGAGCATCCCACCACAGCATGGCTCTCTCATGGCATCAGAGGAGCTGCCACTT Variant GeneID:613762|LOC613762:XM_002690533:572_cdna 534^611 1 EMBV3_34825 GeneID:613762 10 GENE LOC613762 NULL hypothetical LOC613762 EMBV3_02438 CTGCAGCCTGGTCTTTGTTCCAGCAACTTCTCTATGGTCTCATCTACCACAGCTGGTTCC Gene GeneID:785909|CACNA2D2:XM_002697073:587_cdna Constitutive 0 NULL GeneID:785909 22 GENE CACNA2D2 NULL calcium channel, voltage-dependent, alpha 2/delta subunit 2 EMBV3_31949 CTCTCAGGAGTACTTTCCTTGCACAGTTTCTGCTCGTCCTTCACAGAAAAGCCTTGACGC Gene GeneID:506309|LOC506309:NM_001103088:8_cdna UTR3_Alt 2 NULL GeneID:506309 8 GENE LOC506309 MGC166209 hypothetical LOC506309 EMBV3_35076 ACTGCTAGTATCTGTGGAAGAAGTCATCTCAGCTCTACCCACTGGCAGGTCTCCAGAGTG Gene GeneID:519314|LOC519314:XM_002695012:248_cdna Constitutive 0 NULL GeneID:519314 18 GENE LOC519314 NULL similar to zinc finger protein 792 EMBV3_34308 GATCTAGAACCTGCTACTCACTGGGCTTTGGATCCTGTGGCTTCAGACCCTTGCTTTACG Gene GeneID:100297089|LOC100297089:XM_002684596:35_cdna Constitutive 0 NULL GeneID:100297089 1 GENE LOC100297089 NULL hypothetical LOC100297089 EMBV3_21434 CCATCCCTTCTGGAAGTCTAGGGGCCTCAATGCCTGCAACAGCTGGCCTGGGCAAATAAA Gene GeneID:515890|URM1:NM_001075729:103_cdna Constitutive 1 NULL GeneID:515890 11 GENE URM1 MGC140746 ubiquitin related modifier 1 homolog (S. cerevisiae) EMBV3_06505 CACACAGGCGCTGGAACGACCACCAGGGCCGGGGCTTTGGAGAGAAAGAATCCAGTCCTG Variant GeneID:539321|SERTAD1:NM_001040564:709_cdna 834^936 2 EMBV3_22438 GeneID:539321 18 GENE SERTAD1 MGC128632 SERTA domain containing 1 EMBV3_20718 AATGAGCAGATGTGTGACCCCAGTTAGCCGCTTATTTCTAGAGGGTTCTAAGTGTAACCC Gene BVV0102_244400 + 1 EMBV3_38713 GK000003.2:16837423-16869283 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29370 TCCAACTACAAGGCTGTTTATGGAGGCTTCTCATCTAGTGTCGAGGGGGTCTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_18633 AAGGGATCCATGCCAGCAGTTTCAAGGCTGTACCCAGTTTGGTCGGAGGTTCCAACAGTT Gene BVT0102_040273 + 1 EMBV3_03032 GK000012.2:68741354-69494591 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035528 TCONS_00037161 2 XLOC_020930 XLOC_021315 Coding TCONS_00037161 XLOC_021315 NonCoding NonCoding - 12:68777213-68778080 - TSS26872 795 1 TCONS_00037161_1 69 0.226415094339623 2 0.0842956120092379 2.66900037401741e-11 1.99369814976225e-117 6.63987043331512e-34 2.89642404773874e-15 0.000395238333456332 7.76840096112557e-45 1.45545536252889e-05 2.41966384550097e-26 3.48259166008048e-05 1.68131956696468e-280 0 0 1.96051466610309e-305 0 0 0 0 0 0.000861570559170251 0 3.81117666857155e-05 0 0 0 0.000136364842386351 0.000351318251284983 6.03219550100573e-05 0 0 0 XM_005218456.1 HAS3 PREDICTED: Bos taurus hyaluronan synthase 3 (HAS3), transcript 8e-39 165 73.90 0.366037735849057 0 noncoding CTGAAAGCCATGCACGCTACCTGGCTGCAAGGGATCCATGCCAGCAGTTTCAAGGCTGTACCCGGTTTGGTCGGAGGTTCCAACAGTTTCCTCCCACGTGATGAGGGCAGGCGCTTATTGCAGAGGGGCCTAGGAGAGTCCAGGCTCCGTCTCACTGCCTTGAAAAACATACTTGATGAGGAGGAGCGTGAAAAGGTCATCTTGAAGAAAGCAAACTGAGGGGGCTGAGACTCAGCTAAATTTGAGAGAGGAAGTCAGGAGAATACAGCTTGAAACACTCAGGCCCTCATTTGTTTCTGTGATTAGGATTATCCTTCCTGTTGCTCTTACTGTTGTTATTGTTGCTGAGTAGCTAAGTCGTGTCCGACTCCTTCGCCAACCCAATGACTGTGGCCCATCAGACTCCTCTGTCCATGGGATTCTCCAGGCAAAAATACTGGAGTGGGTTGTCATTTCCTTCCTTCCCATCCAGGGATTGAACCCATGTCTTCTGCTCATTATTTACCACTGAGCCACCAGGGAAGCCCTTACCTTCTTGGGAGATGGCCAAAACATTTTACCTCCACAGAAGTGATCACACAAGCATGAATCGACGTGCCTAAGCAATATCCAGGTTGAATACCTTCTGCCCAAGGCCTGAGACAGCCACGGCCTTCAGCACCATCACCAAAGTGCTCTCCTCCTGGCCCCTCTTCATCTCAAACATCTGCTCTTACTTTTTGAAGAATGTCTTCAGGATCTTCTAAGGTGGCTGATCAATCAAGAAACTAGGGCTAATTTTCAAAGACAGCACTG TCONS_00035522 r 3' 35861 TCONS_00035522 r 3' 35908 EMBV3_22211 CCCAGCCAGTCTAGGAATAAGGACACCTGAGGGCAGCATCAGCACTTTTGAGAACTCAGT Gene BVV0101_039225 + 0 NULL GK000019.2:51748741-51757838 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42816 ACACTGTGACGATACATGCTGCAACACCGCAGTTTATCATTGGACCTGGAGGGGTGGTGA Gene GeneID:100336638|LOC100336638:XM_002690972:364_cdna Constitutive 0 NULL GeneID:100336638 10 GENE LOC100336638 NULL GA binding protein transcription factor, beta subunit 1 isoform beta 1-like EMBV3_05013 ACTCCAGTATCGCCCCCTGCGTTAAAGGATTCCAAAGTAGCTGGTTCTACTGTTTCATGG Gene BVT0102_131924 - 0 NULL GK000002.2:126170512-126188846 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106623 TCONS_00106626 TCONS_00106625 TCONS_00106621 TCONS_00106622 TCONS_00106627 TCONS_00106624 1 XLOC_062852 Coding TCONS_00106623 XLOC_062852 Coding Coding FAM76A 2:126187249-126214802 j TSS78441 2980 1 TCONS_00106623_5 126 7 0.892094947735192 1.3862421316599e-12 6.45608093266567e-32 0.000196174863372075 9.71915513539601e-24 2.49808197175667e-12 4.58105395461148e-17 0.000384970917173929 0.000177093870773487 0.00067070202418256 1.60458402302231e-08 1.40241225340431e-05 4.95470836644004e-06 0.000257009526131727 3.50434170717361e-05 2.66607836337612e-05 2.26513083675873e-08 0.00117085505317331 0.00197230291282158 0.000309440516338201 0.000191570107931677 2.03173722080721e-68 1.72026186201356e-05 0.00114780041399701 0.00147055029009113 0.000281176548516573 0.000148954034942256 2.32128664957856e-16 9.10522193237192e-05 1.10366471149707e-10 1.35587209517378e-09 NM_001015660.1 FAM76A Bos taurus family with sequence similarity 76, member A (FAM76A), 0.0 2415 99.93 0.45 NM_152660.2 FAM76A Homo sapiens family with sequence similarity 76, member A (FAM76A), 0.0 2275 88.26 0.590939597315436 0 coding 0 0 0 0 -0.220777169611868 0.41689714005886 -0.00512025471343981 0.920839742826185 AAGGGGAAAGATGTATCCTGTGGTGTGAGCTCTTGGCTTGCCCAAACCTTGTCAGTATTGCAACATAATTGCAGCTTTTATTGGCAACAAGTGTCAGCGTTGCACAAATTCAGAGAAGAAGTACGGACCACCGTATTCTTGTGAACAGTGCAAACAGCAGTGTGCATTTGACAGGAAAGATGATAGAAAGAAGGTAGATGGGAAATTGCTATGCTGGCTATGCACACTTTCATACAAACGGGTCCTTCAGAAGACCAAAGAGCAGAGGAAGCACCTGAGCAGCTCTTCCCGTGCCAGCCACCAGGAGAAGGAGCAGTATAGTCGACTGAGTGGCGGCAGCCATTACAACAGTCAGAAAACCCTTTCTACGTCTTCAATTCAAAATGAAATCCCAAAGAAAAAATCCAAGTTTGAGTCGATCACAACCAATGGAGATAGCTTTTCCCCAGATCTGGCTCTGGACTCACCAGGCACTGACCACTTTGTCATCATTGCCCAACTGAAGGAAGAAGTAGCCACTCTGAAGAAGATGCTGCATCAAAAGGATCAAATGATTTTAGAGAAAGAGAAGAAGATCACAGAGTTGAAGGCTGATTTTCAATACCAAGAATCTCAGATGAGAGCCAAAATGAACCAGATGGAGAAAACCCACAAAGAAGTCACAGAACAATTGCAGGCCAAAAACCGAGAGCTCCTGAAGCAGGCAGCTGCCTTATCCAAGAGCAAGAAGTCAGAGAAGTCAGGAGCTATAACCTCTCCATGAAAGACCACAAGAACGCTCCCGGCAACAGCAAATGGATTCCTCGGTTAGGGTGGCAACCTGGCTGTTCTCTGGGAATTGCAATCTTCCTTAAGAAATCTCTATATTATTACAGTTATCCTTCTTTGTGTGACTGCGTTGGGCTGAATGGAAACACCTGGTTTGTGCTGTGTTATGACTGCATGCTTGAATGTTTGGGGTTTCAAGCTCCCATCTCCTCTTATTCTCTCACTCCCCTCTCTACCCCGCAGCCCTTCTCTCAGTACTATTGTCTCTCTTTTGCTACTTTTTTTTCCCCCTTTTTGTGGTGGTCACTGCTCAGTGTTATGTGCAGAATGATTTTTTTTTTTGTCCATCATTGCATCCTGCCATACCCATGAGCAAGCAGTTTGGCATTAATTACATATCACTGCCACCCTCTGAACTTTGAAAACTGCCACCTTAAGACTTGGTACAATGGAAGAGACTTTTTCTCTCCAATAAACCTTTTGCTTCAGGGTATACCCTTGGGTTTTTTTCCAGGTATATTATGTATGAACTTTGTACTATGTATAGCCAGAGTTTTATTTATTTTTTAAAAAAAGAAACTTTTTCTTGATAAAGGAATAATGGTAGCCTAGCTTGTTCTTCTTGTAAAAGTGATGCTTCTTTTTTAAAAAAAAGTACTACTCTCTAGCTTTTAGTGAAAGAATCAGATCTTTTCTTTCTTGTTACCTTGGAGTCTTAAAACTGATTGCTAAGGTGAAACAATTCAATATATAAGTATGGAGTTAAGTGCCTTTTGGAGGGTTTCTTGGAAGAGCATGTAAGAAGATACTTAAGGGAGATAGCAAAGATTTGGAGAGTCTGTCTTTCTAAGTAAGGACAGAAAGAAAGGTTGTCCAGGTTGTACTGGACACTTCCCTCTCCCTCCCCTTTCTTGATTGTTTTATGTGACTGATTTTAAATTCTCACACTGCCACCTCTTTTTAAAAAAAAAAACAAACGCTCTTATATCAGTTGTCATACTGGGCCATTGTCAGATAGCTTTTTTTAAAATGATTCAAAATGGGATAAGATTTGGACTACAAAGCATTTTGGAAGTTAGTATGAGCTGCTCAAGAATGGACTCTGAGTGTGACTGGAAGAATGATATCCCTGTATGTACTGTCTCCCCACTCTTCCTCACCCACTGCCGCCTATACACTCCCTGCTTTTAATGGAAATGTGTTGAAAACAGGTGCTTCTCAAAAGCAGCTTGGCCCCAACCTGAATTGTGTCCTGTTTTCCCTTCTTGACCCAGTAGGCACATGGATTTACTTTTCATGTCAGAGGATAGATTTGCATTTCTAGCCATACTCTCAGGTCCTCTGTGATGTTTGTGAAAGAAATTAGAGATGTGTGGTGTGCCATGAAACAGTAAAACCAGCTACTTTGGAATCCTTTAACGCAGGGGGCGATACTGGAGTTAGAGGTAATCATAAGGGCAGATGACATTTGTACCTCAGACTACCAGAAGTGCAGCAGTAAGTTTAACTTACTAGGCATTTTCCAGGAGCAAAGGCTTCTAATTGGTGAACATTCTCACGAGTGGAGCCATGCACTTAATTGGACAGAGACATGGAAATGAGTGGCTTCCTTCAGATACGAGGAACAATGGACCATGTTGCTTATCACTCTGGTAGGGGATGTAATTTTCTCTTCTAAGCAAGGGAAATGGCAGTGCTAAATAGTTTTGTAACTTTTTGAATGAGAAAATTTTAGGTAAAGACAACCTGTCAGATAATATTTTTCAGATGCATTTACATTGACTATGGGGAAAAGATTGTGAAAAAAGTTGCAGTCATGGGTTTTTTGTTTTTTTTTTTTTAAATTTTAAAGACTTGAGAAATTCTGTTACCTGAAGTGACAATGTAAAAACATATTTAGTTTTATACTAAATCTTTTTTTAAGGTCTTGGCATTTAATATAAAGCAAATCCATACATTTTCTAACTTTCCACGAGTTCCAAAAAGAGAAGGAAGAAACCTCTGTCTTGAAATTTTGGTTTTTAAAAATCATGATACTGTTTTACCATAAAATTGAGTAGCTAACTTTTGGTAACACCTTTTGTTTATTTGTATGTTTGTAATAATGGACATTTTAAAACACAGGAATGTTTTGGTTTGTACAGACTTTGAAAAATGTGTGTTAATAAAAATTCATATGGACTCAAGTATAATTATTGCTTTGTTTGTTTTT EMBV3_19160 GCAGACTTTGTCAACCTGTCAACTAATCTGAGTCTTCGGTCATCTGTCAGTGAAGGAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14035 GTCGCAGTGCTAGCGTTTCTGGTCTCCTGGCTGCCTTACTTCCTGGATTCCATCATTGAT Gene GeneID:783342|LOC783342:XM_002690236:40_cdna Constitutive 0 NULL GeneID:783342 9 GENE LOC783342 NULL similar to trace amine associated receptor 6 EMBV3_37615 TAAAACTCTTGATGCAATAACAGCGGTCTTGCCACCCGTGGTGTCTGAGGTGGGTCTGTC Gene BVT0102_074848 - 1 EMBV3_39909 GK000007.2:111466023-112060683 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214898 TCONS_00214896 TCONS_00214899 TCONS_00214903 TCONS_00214905 TCONS_00214897 TCONS_00214904 TCONS_00214895 TCONS_00214900 1 XLOC_130789 Coding TCONS_00214903 XLOC_130789 Coding Coding MAN2A1 7:111403726-111607153 j TSS160624 6041 1 TCONS_00214903_5 828 22 0.970411845093547 1.32250668765263e-13 0.000495903915281935 0.000205766516087441 1.51409947362104e-08 0.000645567239626516 0.00012526989359902 0.000278415384588801 0.000179002889236991 0.000410222119941011 0.000118812806663369 0.000188490598271444 4.69721635669494e-05 1.24561446420136e-05 3.44539549146535e-13 9.59077759995961e-12 0.00264275512291942 0.00114107853385737 0.00440785990635195 0.000436480026855215 3.32082861760779e-05 1.68581929315622e-06 0.000628224892731712 0.000818175056881431 0.00388724834134878 0.000821659240830471 0.000938925397110537 0.000490972424169531 1.56787932266503e-07 1.90093668176506e-06 4.23632732207152e-05 NM_001205886.1 MAN2A1 Bos taurus mannosidase, alpha, class 2A, member 1 (MAN2A1), mRNA. 0.0 7038 99.80 0.649561330905479 NM_002372.2 MAN2A1 Homo sapiens mannosidase, alpha, class 2A, member 1 (MAN2A1), mRNA. 0.0 4442 84.54 0.661645422943221 TCONS_00214903_5 sp|Q16706|MA2A1_HUMAN MA2A1_HUMAN Alpha-mannosidase 2; 0.0 1368 79.85 0.981884057971015 3 coding 0 1 1 1 -0.149725617875932 0.58448546261357 0.06165325457376 0.29572177240865 CTTCTGTTCGTAGTTGTGATTGGGTCAGCTTTCAATGTTGCAAGAAAAAATAGACCATTTGGAACGCTTGCTAGCTGAGAATAATGAAATCATCTCAAATATTAGAGACTCAGTCATCAATTTGAGTGAATCTGTGGAGGATGGTACGAAAAACTCAAAAGGCAATTTCAGCCATGGTGCTGGCTCTCCTCTTCTGCCATCGAAACGTTTGTCCCTCACAGTTGACCCTGCAGACTGTCTGTTTGCTTCACAAAGTGGAAGTCAGAGTTCAGAGGTGCAGATGTTGGATGTTTACAGTCTAATTCCTTTTGACAATCCCGATGGTGGAGTTTGGAAGCAAGGATTTGACATCACTTATAAGCCTGATGAATGGGACACTAAGCCCCTTCAAGTCTTCGTGGTGCCTCACTCCCATAATGACCCAGGTTGGTTGAAGACCTTTGATGACTACTTTAGAGAGAAGACTCAGTATATTTTTAATAATATGGTTGTCAAGTTGAAAGAAGACCCACGGAGAAAATTTATATGGTCTGAGATCTCTTACCTTTCGAAGTGGTGGGAAGCTATAGATGTTCAGAAGAAGGATGCTGTTAAAAGTTTGCTAGAAAACGGTCAGTTTGAAATTGTGACAGGTGGCTGGGTAATGCCTGATGAAGCTGGTGCACATTATTTTGCCATAATTGACCAACTAATTGAAGGACATCAGTGGCTGGAGAAGAATCTAGGAGTGAAACCTCGGTCTGGTTGGGCTATCGACCCATTTGGACATTCACCAACAATGGCGTATCTTCTAAAACGTGCTGGATTTTCTCACATGCTTATTCAGAGAGTTCATTATGCAGTTAAAAAACACTTTGCATTGCATAAAACACTGGAGTTTTTTGGAGACAAATTGGGATCTGGGATCTGTCACAGACATTTTTTGCCATATGATGCCCTTCTACAGCTACGACATCCCCCACACTTGTGGGCCTGATCCTAAAATATGTTGTTTTTTTGATTTTAAACGGCTTCCTGGAGGCAGATACGGTTGTCCCTGGGGAGTCCCCCCAGAAACAATATATCCTGGAAATCTCCAGAACAGGGCCGAGATGCTCCTGGACCAGTACCGAAAGAAGTCAGAGCTCTTCCGTACCACAGTGGTCCTGGCCCCGCTGGGAGACGATTTCCGCTACACCGAACGCACCGAATGGGATCACCAGTTCAAGAATTACCAGCTGCTTTTTGATTATATGAACTCTCATTCTCAGTATAATGTTAAGATACAGTTTGGGACTTTATCAGATTATTTTGATGCACTAGAAAAAGAAGCTTCAGCCAGTAGTAGGAATAGCCAATCAATATTCCCTGTTGTAAGTGGAGATTTTTTCACTTATGCTGACCGAGATGATCATTACTGGAGTGGCTATTTTACATCCAGGCCCTTTTACAAACGAATGGATAGGATATTGGAATCCCATTTAAGGGCTGCTGAAATTCTTTACTATTTCGCCATGAAACAAGCTAAGCAGTACAAGATAAGTAAATTTCTTTCATCATCCCATTATGTGATGCTGACAGAAGCAAGACGAAATTTGGGACTATTTCAACATCATGATGCTATCACAGGAACTGCAAAAGATTGGGTGGTTGTGGATTATGGTACCAGACTCTTTCATTCACTGATGAATTTAAAGAAGATAATTGGACATTCTGCACTGCTGCTTATTTTGAAGGACAAACACTCATACGACTCTTATTCTTCGGATACCTTCCTAGAAATGGATTTGAAACAAAGAACGCAAAGTTCTCTACCACAAAAAAATGTAATAAGTCTGAGCGCAGAGCCAAGGTATCTCGTGGTCTATAACCCTTCAGAACAAGCTCGAAGCTCTGTAGTCTCAGTCTGTGTGAGCTCATCCGCAGCACAAGTGTCCTCTGCTTCAGGAAAGCCTGTGGAAATCCAAATGAGTGCAGTGTGGGACACAGCAACAACCGTCTCACAGACAGCCTACGAGATATCTTTTCTAGCAGAGATGCCACCACTGGGACTGAAAGTGTATAAGATTTTGGAAACATCAAGTTCAAATCCACATTTAGCCAAATATGACCTATATAATGGTAATATAGCAAATGAAGGAATTTTTAACATGAATAATATAAAAAGTGCTCAAGAAGCTATAACTCTAGAGAACTCCTTTATTAGGCTGCGCTTTGGTCAATCTGGGCTTATGGAGGAAATGCTAAATAAAGGAGATGGTAAGAGTCTTGAGGTGACAGTACAGTTTTCCTGGTATGGAACCACAAGTAAAAGGGATAAAAGTGGTGCCTACCTCTTCTTACCCGACGGGGAGGCCAAGCCTTACGTTTACACAACACCACCCTTTGTCAGAGTGCAGCGTGGAAGGTTTTATTCAGACGTGACTTGCTTTTTTGAACATGTTACCCACAGAGTTCGACTGTACAACATACATGGAGTAGAAGGACAGTCTGTGGAGATTTCCAATATTGTAGACATCCGAAAAGAGCATAACTATGAGATTGCAATGAGAATTTCTTCCAGCATCAACAGCCAAAACAGATTTTATACTGACCTAAATGGATACCAGATTCAGCCTAGAGTGACGATGAGCAAATTGCCTCTCCAGGCGAACGTCTACCCCATGACTACGATGGCGTACATTCAGGACGCCGAGCGCCGCTTGACTCTGCTCTCGGCTCAGTCTTTGGGTGTTTCGAGTCTGAAGAGCGGTCAGATTGAAGTTATCATGGATCGAAGACTCATGCAAGATGATAATCGTGGCCTTGAGCAAGGTGTCCATGATAACAAGATTACAGCTAATTTATTTCGAATACTACTAGAAAAGAGAAGTGTCGTGAATATGGAAGAAGACCAGAAGGCAGTCAGTTACCCTTCCCTCCTTAGCCACATAACGTCTTCTTTCCTGAATCACCCTGTCTTCCCAATGACAGAAAAGGTCCCCGTGCCCACCCTTCAGCTGCTGGGTGAATTCTCTCCCTTGATGGCACCCTTGCCCTGTGACATTCACCTGGTTAATCTGAGGACAGTGCAGTCGAAGGTGGATGGCAAGCATTCCAACGAGGCCGCCTTGATCCTCCACAGGAAGGGGTTTGACTGCCGCTTCTCTAGCAGAGACACCGGGCTGCTGTGTTCCACAACCCAGGGAAAGATCCTGGTCCAGAAGCTCTTCAGCAAGTTCACTGTTGTGAGCATCACACCTTCGTCATTATCCCTGATGCATCCCCCTCCAGACGCCCGAAATATAAGTGAGATCAACTTGAGTCCCATGGAAATCAGCACATTCCGAATCCACTTGAGGTGAACCTGGTTTCAGATTTGGATTGGAAAGCAATGGCTTTTATATACTTCTTGGTTTTATGTGCAATAGAGAAGCACATTATTTTAGCTTCTGGCTACTGTGAGGACATGAATTCTGTGATTCTTCTTCTTAAACCAGTACAGTAGGAGAGAAAAAAAAGCCATGCTACAAACTAATTTTTTTTTTAAGTTCCTTCCATGAACTGCTATCATCAGTATGAATTGATGCAACAAACGAAGAAATGTCTAAAGACAGCCTCTCAACAGATTGTATCTCAGGTTAAATGTTAACTAATTATATCTATGTTGGGGGTTGTAAAGAGATTGTTCTCAGTATTCATGTTGCTGACCCTTTGTTAGTTTTACAAAAATACCCATTTTTACCAAAATGGGATAAAAAGCTGGTGGGTAATAGCTAATGGCCAAAATGGTTGCAATCATTCATACGTGTTAGAAGAACTTTATGTGTTGAAATATGTGGAAAAGTGCAATCCGTCAACCCGATGATACATCGTTGCTTTTACATGTTTCTCTACCACTTGGCCCTCCCTTCCTGCCCTCTGTAAGCATTTCCAGAAATACCAGATTTTAATCATTCAATAGTAGACAAAGAGGCATATTTTCATTACTTGACAATGTGGGATAGGTGCAATTTATTCCATTGTCACTAAGCTGGGAGAAGCGATTCCGTAGGTACCATGGCCTCTTCTGGGTACCACAAGGTGTCTTTTTACACAGCTCATTTGAGTACAGATGTTCTGAGAAGGGGTTTTCTATTTTAAAAGTCTCATATCAGAATAAATGTGCCTTATTTTCTATAAGTCTTGTTAAGTCTTTTGGTGTCCATATTACTGTTGCGGGAAGGTGGGGAGTGGCTGGGGGGAGGGGCGGGTACTTTCTATGACACATAAATTGTATAATTTTTGCCTGACAATGCTGGCCACGTTCTGATCTGTTTCATTAAATTTGTGGTGATGTTACTCTAAACATTTTGACTATTTGAATGTACTGAGATGTCAGAAAACAAAACAAGGAAGAAAAATATTGTTAATTAAAATATGCTGCTGCCGAGGAGACTGCAACTTGAAGCTAGGATTTTGTAACAAGCAGAATCCACATACTGTTTTCATTTCACAAGAGTTCACCATTTTGAAGAGAGAATGCTTTAAAATAGGCCGTTTTGAAACCCACTTATATGTAACTCATCATAATTTATCATATTAAAGAATATGTTTGTTCAGTGAACTTCAAACTTTTGTACGTGCTAACCTCAAAATGAAGTTCTAAACCTATGTGCCATTACAGTACTTTAGATCAAATTTATTTGGGATCATTGTTAACTTGACATTAAAATAAAACCAACATTTAGAGTATTCCATTTTAGCATAGAAAGGATTCTTGACTATGTGCACTGCTGAAAATTCTGTGTTAACTAATAGGTTTAGTATTATCTGACTTTAAACTTCCATTTTACCTCCTGCCATTCCAACATCTTCATACAGAAATAAAACATCATTTCTGTTTTATCATGTAGCCTAGTTATCATCTGTATTACCAGTCAAGATGCAGCTCCTTAGATTATTGTTCCATTAAGTTCACAAACTTCTTTCGCCTTTAATTATTAAGGAAATAATAGTAGTGTTGATGAAGATATTACAAGAGAGTAATTTCTTGCAATAAACATGTACTGTAAGTTTCCTTCCTTGTTTTGGGGGGAGGAACAACTAAAACAAAAAACAAGCTTAATTTCTGTGAACATCTACAGACGTTAGGATTGCCAGACACAAAGCCCAGGAATAAGATCAGTATTTTCATTGCATCTTAAGTGTAAAACCTTGCTACAGGAGTTCACTGTGTTCTGTGGTTCAAGTGGTTGTACGTAATCGCTCTGGAATCTCTGATCAGCTGAAATAAAACTCTTGATGCAATAACAGCGGTCTTGCCACCCGTGGTGTCTGAGGTGGGTCTGTCCTGTGCTCCTCGGGGTCTTACTCAGTGCGTGTGGTCACCAGCTGCTCACAGGTAAAGCGGAAATTCTCTTTCACCAGCAAGTTTCTGCTCTTTATTTTTAGAATAAATCATCAGGGAAATGAAGAGAGGATGCTTTGCTTTGGGTTGTGGTCAAGAACTGATTAGATGATTTGGTGTCCCTGGCACACGCTGCAAACCGTGCCCTTCAGTCGTGATCTCAGTGGCATATTTGTTAGCTTAGATTCTATTACATTCATTATCGCAGAGGTTCAGTTGACCAAGTAGTTCATGACTTTCTCTTTTTTTAAAATTTAATTTGGAGTTATAACTGCAGTGTTTGAGAACTTAGCGTCCTTGTTTTCTGCAAATACTGATTAAAACAAAATGCTGTAAAACGTGTTGTAAAACATTGTACTTGCCTTCCCATGTCTTTGTTGTATTTGTGCTGAAATGTTTTCATATTCCTTTGTCGGGAAGAAAATCTTTGCTTTCATTTTGATTATGTTGCTTTCCTTGAAATCAATAGGTTTTGATATTTTCTCTTGGAAGATTTTATATCTTTTTGGGAATATGTAATATAAGATATCTAATAAAAGATCAATCTTACCATGTCTGTGGTCCTCTAGAGCAGTTCTTAAATCTGATTTTGTGAGCAAGATATAGTAAATGTTTCCGTGGGTAGAGTGGAGGAGTAAGGGCTTGTTTTGTCTTCTGTCATGAGTGAATTGCTCCTTCTTCAGTCCATTTCCGT EMBV3_22483 GCATGGGAAGCTCAGGATGCAGAAAAGGGATCAGAACTGGTTCAGGATAAGTTGGAGGTG Gene GeneID:338060|NDUFA10:NM_176655:2_cdna Constitutive 2 NULL GeneID:338060 3 GENE NDUFA10 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa EMBV3_24508 GTACAACAACATAAAGGTAAAGGTAAGAAGCAAGTCAACTTACCATGTCAAATATTCCCC Gene GeneID:524503|CTBS:XM_002686290:150_cdna Constitutive 0 NULL GeneID:524503 3 GENE CTBS CTB chitobiase, di-N-acetyl- EMBV3_24672 TAGGAGGCTTCTCGAATGCCATAGCCCATACTGCCAACACTTTTCGCCTGAGTTTCTGTG Gene GeneID:506891|LOC506891:XM_002693675:309_cdna Constitutive 0 NULL GeneID:506891 15 GENE LOC506891 NULL similar to olfactory receptor, family 9, subfamily G, member 4 EMBV3_11666 ACGAAGTAGTCTGCATATAAGGTGCATGGAGGGTCCTGGCCCCCACCCTCCAGTGCCACC Gene GeneID:511215|CHST10:NM_001098011:47_cdna Constitutive 2 NULL GeneID:511215 11 GENE CHST10 NULL carbohydrate sulfotransferase 10 EMBV3_04292 CAGACGCCATCTACGAACACATCAACGAGGGGAAGCTGTGGAAGCACATCAAGCACAAGT Gene GeneID:616109|UQCR10:NM_001113723:104_cdna Constitutive 0 NULL GeneID:616109 17 GENE UQCR10 MGC127828 UCRC ubiquinol-cytochrome c reductase complex 7.2 kDa protein EMBV3_17601 GATGAGCCTTTGCCTTCCATAGTAGGTGGTGTGGGTTCGCTCCCTGGTTGGGGAAACTAA Gene BVV0102_007594 + 0 NULL GK000030.2:27643330-28241951 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246621 TCONS_00246620 TCONS_00246622 1 XLOC_151047 NonCoding TCONS_00246620 XLOC_151047 NonCoding NonCoding - X:27724597-27727556 - TSS184856 2959 2 TCONS_00246620_3 102 0.459952686718486 1 0 3.75508536292575e-05 8.3931170294535e-10 0 7.26994278010732e-10 2.32892149452289e-05 8.93756359419158e-13 4.68209709325844e-10 2.99833250870216e-06 2.4785528403411e-05 0.00240789590730996 0.000190595749231987 0.000628063566387097 0.000433542952522626 0.000346736746527969 0.00101574848965371 0.00165277289503289 5.61076762450729e-06 0.0010863075382447 2.42343565738192e-06 0.000371781758765796 1.98102405540517e-05 0.00153510091326838 0.00487994482825767 0.000929559385974707 0 0.000116932759966875 2.90699429637733e-13 0.00106116469732435 0.00171543021600594 0.0023261658998316 XM_005227564.1 LOC101907050 PREDICTED: Bos taurus uncharacterized LOC101907050 (LOC101907050), 0.0 1290 100.00 0.241297735721528 0 noncoding GAGGAATCTGCCTGCAATGCAGGAGACCCGGGTTCGGTCCCTGGGTCGGGAAGATCCCCTGGAGAAGGGAATGGCAACCCACTCCAGTATTCTTGCCTGAAGAATACCATGGACAGAGGAGCCTCCTGGGCTATAGTCCATGGGGTTGCAAAGAGTCAGACATGACTGAGCGACTCTCTCTCTCTCTCTCTCACACGCACACACACACACACACACACACACACGAAGAATAACTGACTCCCTATTCATATAGGCTTTGTGACTTGCTATTCTCACATTAGGGAAAATCATAACTAGCAAGGGTGGTCCAAAACTTGTCTTTGATTCTAACAAAAGTCATGTGGTGCTCAAAGGTGAACCCAGCTGGATTCATTGCCTGGTTTTTAATAATCCAAGCCCTTGACTTCAAGTCCTGTTGCAAGGACTAATAATCATTGTGTTTCGTTTGATTACTTGTTTTGCAGTTGGCCAATGCATCCTGTCTGGAGTCTTAAATGCTATTGCACAGCCCGTGTCACACCAGAGTATTCAACGATGCATTCTACTGCAAAAGGAGCAGGAGAGACCAATCCATGTCCTACTACAGACTACATTCTCTAAACAAATTCCTGATCATCAAACTCAGAGCAATGTTGATAATCTAGATAACATGGGTTAATGGCTTGTGGCCAGAAGGGGGTACTAAAAAATATCTCTTGACATCCAGGCTAGGACATGTTATTCTCCCATTAGACATTGAAAAAAATCTCAGGGAATGCCAACTTCAGGTGAGATCATGAGATCTTGTCACTCTGAGATCATGATAAAGTGAGACAAAACAAAGGCCACTTCATGATTTTTTTGTTCCTTAGCACAGACAAAAGCAAAATCACTGTACAAATCACCGTATATCCCTCTCCTAGCTAGTATGAGTGACTGCTAGTTTGGGGGTTTTGTTTTCCCCTTTGCTTTGTTTCTTTGTTTGTTTTCAGCAATTGTAGCTTTAACCTCACTCTAATCTATTCTCTCTATACAAAAGGTTTATTAAGATACTGTCATAGGAATTCCCTGTCTTCCTGACAGTATCCAATCCAGATCAGAGCTCTGCTTCTTTAAAAATTCACCCAAATCACCTAAAACAAGCCCACCTCTTTTCTTCCTTAATTTTTTTTTTTGAGGTGGTCCCTTTATTTAGTCTTTATTCAATTTGTTACCATATTGCTTCTGTTTTTTTTGTTTGTTAGTTTGTTTGTTTTCTTTTATGTTTTGGTTTTTGGCCACAAGACATGTGGGACCTTAGTTTCCCCAACCAGGGAGCGAACCCACACCACCTACTTTGGAAGGCAAAGGCTCATCCACCGGACCAGCAGGGAAGTCCCAAGCCCAAATCTCTTAACATCCCTTTTCTATCACCCACGTACTTGTGTGGCCCACAGTTCCTTCACTGTGTATGTTCTCCTTCACTGCAAAGAATAATAAACTCAGATTGTTCAACTACAAATGTGTTCCTGCTGGTCTTAAGCTGGGAGGCATCGAAATATCATATCACGTTAAACCTGATGGCAAAGCAAAGCAGAAGACTCAAATGTATTTGATTTATGTATTTATGTATTTGTATCTAAATGTATTTACAATAACCCCACATGCTATTATTTCTAATGTAAGTTTCAGTTTACAAAGACATTTATTTTGTATCCTTTCAACCAGCGATTTCAAGGCCTAGCGACTGAGAAGAGGGCTAGTATACTGGTGGAGATACTAACAATATGAACAGTAAAAGACCAACCATCAAATATATTGAAAATAGATATTCATGATCGTGGAATGGGAGAAAGAAAGCAAAGGTTGAGTTTTGGACAATGAGTTTGAGATGATGGCCTGACCACCAGGTCAGATGCTGTATGGGCCACAGAAGATTAGACCCAAATTCTTCACATTCCAAAGCACAGGGTTCCAGAGCAAACGGTTCCTTTGGGTGGCTACCAACCTTCCTCAAGCCCTGTCCCCAGCCTCCATAACATCTCGGTAAGCACAGTGAGACAAATAAGACCCTGATGAGACCCTGTAAATCCAAATGTGACCATTCTGTATGTCCGATTTTCTAACTCCTCCCTATCCCCACAAACATCACCCACCCCCACATAGGTTATCCAGGCGACCTATGTATTCAGAAGCAGAAAGAAATGTAAATTTTACTTGGAATGACTGATTATAGAACAGCACTATCTCACAGAATCCTCTGCGCTGATAGAGATGTTCCATATCTGCGCTGCGCACAGTATAGTAGCCACGGGTTTACATGTAGCCATTGAGCACTTCAAATGCTGCGAGTGAGACTGAGAGACTGAATTTTCCATTTTATTTAATTTTAATCCATTTAAATAATCACATACGACTAGGGGCTACCATCTTTAAGAATATACCTCTACAGCAAGTCTCCTCACCTGTGGTGGACCATACTCAGCCACTTGCCTTCACCCAAAACATGCTCTTCGTGACCGCTTGGATGATTTTAATTCACTTAGAGTCACCACTCTTCATAAAATCCCATGTACAGCAAACACGCTAATCAAAACCATCAGCTGCTTGTAAATTCCTATTTTTGCCATCACCATGTACTATTTTTATTTTTATTTTTTAAAATAATTGACAGACATCACCAATGTAATGCAGTGTGTTTATGTGATGAATACTGCTCAGAGAATTAAGGATCTTTTGGGTATTCAAATCTTACCTTGAATCTGCCCAGATAGTTTTTGTTCCTTCCACTGCATCTTATTACCCTGCTGGTCTTTAAACCAAGTGTGATAGTTGAAGTTTGCTACAATGTGGAGTGAAATTTATCCTTTGGTGTCTGATCTCAGAATCTAATCATAGCAACTGACATGGAAAACGTGTTCACAGACTAGACCAAACTTTCATCTGCACTATTAGAACAAATCATTCCCGAAGACTGTTCATATATCAATTGGCTATGTCT TCONS_00246623 s 3' 514396 TCONS_00246623 s 3' 514396 EMBV3_35497 CCCAAAGTTCCTTGCTTCCAGCTCTGACGCATTTTGTTCGGTCTCTGCACCCTTATGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37155 AGTGGTTACAGAATCCGACTGCCAACGCAGGGGACACAGGTTCAATCCCTGATCCAGGAC Gene BVV0102_115479 + 1 EMBV3_09015 GK000029.2:28892894-28903055 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164917 TCONS_00164916 1 XLOC_100360 Coding TCONS_00164916 XLOC_100360 Coding Coding TMEM218 29:28901251-28918088 j TSS123287 966 2 TCONS_00164916_2 133 0.246376811594203 6 0.942979330007128 2.78656938869159e-05 4.39802672999862e-32 7.93145514892842e-05 1.09298038693817e-21 0 4.4460508792944e-17 0 0 5.68858796772885e-20 4.2581664915885e-06 2.49060543741612e-13 0.000102742964785945 4.91430290011132e-14 0 0.000264187639598581 0.00124754801679396 0.00103119796684764 0.00713472540083222 0.000756382940652423 0 0 1.11514461261902e-25 0 0.000287177638615974 3.27699450830926e-44 2.34113463767749e-16 1.52548662092552e-08 0.000127417970297723 4.77251460163169e-09 6.68046656739453e-10 XR_240623.1 TMEM218 PREDICTED: Bos taurus transmembrane protein 218 (TMEM218), 0.0 1031 100.00 0.590062111801242 XM_005271434.1 TMEM218 PREDICTED: Homo sapiens transmembrane protein 218 (TMEM218), 5e-112 408 81.75 0.432712215320911 TCONS_00164916_1 sp|A5PJF4|TM218_BOVIN TM218_BOVIN Transmembrane protein 218; 4e-73 217 100.00 0.991304347826087 0 coding 0 0 0 0 -0.0239933251198886 0.820815880664114 0.00831685820551804 0.877260682709813 AGACCCAAGCCTCTGTGGGCTGAAACTGGCTGGGCTGAGAGTGTGGGACCCGGGAGATGCGAAGCCAGGAAACCCAGGAACACCCAGAAGCCCAGCAGCACCCCTAACAGCAGGACCAGCTCATCGCACTGTGCCCAGTGCTCAGCCGCACCCCCCGCATGGCTGGCACGGTGCTTGGCGTAGGGGCCGGCGTGTTCGTCCTCGCCCTGCTCTGGGTGTCGGTGCTGCTGCTGTGTGCCCTGCTGTTCAGAGCCTCGGGGGCAGCTAGGTTCTCTGTCATTTTCGTGTTCCTCGGTGCTCTGATCGTCACAGCCATTCTGTTGCTCTTCCCTCGAGCCAGTGACGCCCCAGCCCCCGAGGCAGAGACGAAGATTGTAGATGCCTTTTTCATTGGCCGCTATGTCCTGCTGGCTTTCCTCACTGCCGTCTTCCTTGGAAGCCTTTTCTTGGTTCTAATCCATCACATCCTGGAGCCAATCTATGCCAAACCACTGCGGTCCTACTGAGCCGCCTTCGGGAAAACCAAGACCTTGTTCTCCCTCTCGCTTTGATGTCACTGGTGAGCAGCAAGCATAGCCTCTTAAAATTGTATCCTGACAAAGACCACATCAGCACATTACCCCGCACTGATCCACTAGATGGCGCTGTCTCAAGCTGGCAGAACACACCAGTTGAACGATTTTGTTTTGCTTTGATTTGCATCGATGGGTCCAGCAACGTGCTGTGGGGACGTCCCTGGTGGCCCAGTGGTTACAGAATCCGACTGCCAACGCAGGGGACACAGGTTCAATCCCTGATCCAGGACGATCCCACATGCCGCGGAGCAGCCGAGCCCACGTGCCACTCAGTTGGCCCGTGTGCCACTGCTGACGCCACTGCAACGAGAAGTCCTGGTACCCCAACAAAGAGTAGCCCCCACTCAGCAACAAAGACTCGGCACAACCAAAAATAAATAAAAATACAAAA EMBV3_25606 CTGTAGAGAGTTAGGCCGAGGGGCTGGAAGGCACTTGTTTTTGTTCTGAGTTTAAGGGAC Gene GeneID:613983|HOXD11:XM_002685312:153_cdna Constitutive 0 NULL GeneID:613983 2 GENE HOXD11 NULL homeobox D11 EMBV3_01495 ACCTCCTCCCCGTCTCTGTTCTATAAAAGATCCTTGCATCCAGACCCCCATAAGGTGGTA Gene BVT0101_026492 + 0 NULL GK000013.2:82228077-82350502 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00050803 1 XLOC_030923 NonCoding TCONS_00050803 XLOC_030923 NonCoding NonCoding - 13:82295343-82296451 - TSS37979 1108 4 TCONS_00050803_4 47 0.518953068592058 1 0 0.00157177766535028 0.00036275979115899 0.000233855399213914 0.000457177608307387 0.000378754396480642 1.61419757078725e-05 0.00056843362874018 0.000186836824189801 1.42421149884938e-05 1.11403312352346e-05 0 6.13157507513752e-05 2.58960526800451e-06 4.67003204567233e-05 0 0 0 0 0.00118436943659628 7.13951531751394e-05 2.73982395213002e-06 0 0 0 0.00076288324253042 0.00137984296955418 0.000195656873334895 0 8.76285182730295e-06 0 NM_001078023.2 DCP2 Bos taurus DCP2 decapping enzyme homolog (S. cerevisiae) (DCP2), 2e-24 118 73.78 0.201263537906137 0 noncoding 0 0 0 0 -0.489322971871483 0.113473999771109 -0.237205083859254 0.0696029457390426 GGTGTGGGGGTGTTTGGGTCCAGTGATGTGTGATTTGCATGAACTTGGGCGGGAGCCTCTCCCTGCCAAGGCAACGCCCAGGACGGCCAGGTCTTGGTTCTGACTCGAAGCTGAGTAGATCAAGACGGGACATTTGCTGAGTCCGGGGACCGCCAGTTTGGACCGCAGTGAGGCAGCTGTTAGACGTGCGGTCTCAGGACCCAGGCACTCCTGCTGGACCAGGATCTGCACGTTACCCCAGAGACTCTGCCCAGCCGCTCTCTCTTGCCTTTTCCGTCTCCACTCCCTCCTCTGCCTTTGGCTGGTCCCACTTCTTACCTTTTCCTGCAGCAATTTTGACCGTGAAGCCATGACCCCCCCACCCTGTCATGCTAGCTGTCAAGAAAGGAAAGTACCAACAAACAGAGAAAAAATACCTTGCAACTTCTGTTAGGGGAAACACGCTGACAGAAACCACCTGCAGTGAGAAGCCCACCCACCACAGCTAAAGAGTCACCCCACTGGCCACAGCTAGAGAAACGCCTGTGCAGCGAGGAAGACCCTGCAGCCAAACAAGTAAAAGAACCCGGGGGTGAAGCTGTGACAGGACAGGACAGAATCTGACTCCTCGTCCGTCTGCTTCTTTTTCTTTAAACTTAGCTCTCCGTAGCTTTTGTTATTATAACTTCTGAATGGCCCCTCTGCCGGAATGTTCAACTAAAGTGCCTTTATTCAGCTCCGGGGGAGACATTCTGACCCTGCCCACCTGTGAACAGATGCAGAGAAGAAAAAAATGAACACATCCCCTCCTGACGCTGGCCAAGCCAGGAGATATTCCACAAGACTTACGGGCTTTTTACTTTACCTCCTCACCTCCTCCCCGTCTCTGTTCTATAAAAGATCCTTGCATCCAGACCCCCATAAGGTGGTACTCTAGGACACTCCTCCGCTGTCTTTTCAGATGGCTGGTCTTCCAAATAAAGTCACTATTCCATGCCTCAATACCTTATAACCTGATTATTGGCTGTTATGTGGCAAGCAGACCGAGCTTGGATTCAGTAACAAAACAGGATTGGTCTAAATCATGGTTCTTTTTTGGTAATGACAAGTTGTAGCAAATCAGGACCCC TCONS_00046591 . 3' 53590 TCONS_00046591 . 3' 54697 EMBV3_06531 CCAGCTGCCGTTTTGGCCACTAGATGGCATCTAAATGTTGCCTGATTCTGTTAAGCCTCC Gene GeneID:506415|RSAD2:NM_001045941:69_cdna Constitutive 0 NULL GeneID:506415 11 GENE RSAD2 MGC128573 radical S-adenosyl methionine domain containing 2 EMBV3_20021 CTGGGGTTGGGCCTGAAAGAGAAGGAAGAGGCTGTGGTGGTTGTATTCTCCAAAGATGGT Gene GeneID:516127|LOC516127:XM_002686306:199_cdna Constitutive 0 NULL GeneID:516127 3 GENE LOC516127 NULL similar to RNA binding motif protein 42 EMBV3_07998 CACGGGATGCACACAAATACATTTCCACTGCTGCTAAGTTTATCGGGCCTTCAGTGTCGG Gene GeneID:526221|DRD5:XM_002688429:46_cdna Constitutive 0 NULL GeneID:526221 6 GENE DRD5 NULL dopamine receptor D5 EMBV3_27971 TCCAACTTCAACGCTGATTATGGTCGCTTCTCAACAAGTGTGGAGGGCGTGTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_30335 AGTGAAAATGGTTTGTTACTTGGTCCCAGCACTGTCTTCTGCCCCTGTCCCCCTTCACCA Gene GeneID:510522|FGB:NM_001142917:20_cdna UTR3_Alt 3 NULL GeneID:510522 17 GENE FGB NULL fibrinogen beta chain EMBV3_08186 CGACTGCCAATTAAAAACATCAAGACCTACACCATCAAGGAGGGCTCTGTGAAAGCAGTG Gene GeneID:319096|XCL2:NM_175716:79_cdna Constitutive 0 NULL GeneID:319096 16 GENE XCL2 XCL1 chemokine (C motif) ligand 2 EMBV3_06132 TCCGTGGGGTCACAAAGAGTTGGACACGACGAGCAACTAACACTTAGCAAAGTAGGCACT Gene BVV0102_291979 + 0 NULL GK000018.2:29006522-29400597 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089391 TCONS_00182933 TCONS_00182932 TCONS_00182934 2 XLOC_054176 XLOC_111030 Coding TCONS_00182933 XLOC_111030 Coding Coding NUB1 4:114689754-114726575 j TSS136633 3207 1 TCONS_00182933_3 555 0.0632990333645151 14 0.91328082563824 0.00913220027255416 0.00576751433690372 0.00678560388545845 0.0052352385435806 0.00451476459219408 0.00353078042979271 0.00652817752957879 0.00474083380058324 0.0101728426605042 0.0015096884188661 7.34726313755659e-06 4.52877304574559e-05 0.000993055514889226 0.00155646415018139 0.00117790722349367 0.00843176441697251 6.00888653077338e-15 1.22398040713882e-05 0.0116737071317505 0.00630752969905705 0.00283462222779998 0.00118938566935445 0.00187017669173622 0.0016495586129195 0.00521561260322551 0.00387003607074733 0.00345943039721897 0.000621904914542809 0.000182096285514946 0.00113517135284793 XM_005205827.1 NUB1 PREDICTED: Bos taurus negative regulator of ubiquitin-like proteins 1 (NUB1), transcript variant X1, mRNA. 0.0 5701 100.00 0.985344558777674 NM_001243351.1 NUB1 Homo sapiens negative regulator of ubiquitin-like proteins 1 (NUB1), transcript variant 1, mRNA. 0.0 2046 84.63 0.579045837231057 TCONS_00182933_3 sp|Q9Y5A7|NUB1_HUMAN NUB1_HUMAN NEDD8 ultimate buster 1; 0.0 973 86.69 0.998198198198198 1 coding 1 1 1 1 -2.36907612231593 0.0145261046139052 -0.118905373953767 0.0862037746699203 CACTCGGCGGGTCGCGGCTGGAGCGGCTGTGGCGCAGGACCTTGCTAAGAAGTACTCTGACAAGCTAGAATGTTGTGAAAATGAAGTAGAAGAGATAATGGAAGAAATACGTTGCAAAGCAGTCGAGCGTGGCACAGGAAACGAGCACTACAAAACGACGGGGATTGCCACAATCGAAGTCTTTCTACCTGCACGGTTAAAAAAAGATAGGAAAAACTTGTTGGAGACCCACCTGCACATCACTGGCAGAGAACTGAGGTCTAAAATAGCGGAAACCTTTGGATTTCAAGAAAATTACATCAAAATTGTCATAAATAAGAAACAACTTCAACTAGGGGAAACGCTTAAGGAGCAGGGAGTGACCCACAATGTGAAAGCTATGGTTCTGGAACTAAAACAGTCTGAAGAAGACGTGAGAAAAAACGTCCAGGTTGAAGAAGAAAAGCGAAATGAAGCCAAGCTAGAAGAAAAAAGAATTCAGAGGACTAAAAGAGGACTGGAGATCCTTGCGGAGAGAGCTGAGATGGTGGTGGATCCAGAAGCCACACCATACTTAGACATAGCTAACCAGACAGGCAGATCAATCAGAATCCCTCCATCAGAAAGAAAGGCCCTTATGTTAGCTATGGGATATCATGAGAAGGGCAGAGCTTTCCTGAAAAGAAAGGAACATGGAATAGCCTTGCCATGTCTGTTGGACGCTGACAGATATTTCTGCGAGTGCTGCACAGAGCTGCTGGACACGGTGGACAACTACGCGGTGCTCCAGCTGGACATAGTGTGGTGCTACTTCCGCCTGGGCCAGCTGGAGTGCCTGGACGACGCCGAGAAGAAGCTGAAGCTGGCCCAGGAGTGCTTCAGAAAGTGTTACGGGGAAAATCACCAGAGGCTGCTGCACATAAAAGGAAATTGTGGAAAAGAGAAAGTCCTGTTTTTAAGACTTTACTTGCTTCAAGGCATCCGAAATTATCACAGTGGAAATGGTGAGGAGGCTTATGAAAATCTCAACAAGGCACGTCAACTCTTCAAAGAGCTATATATTGATCCATCCAAAGTTCACAATCTGATGCAGTTGGGATTTAGTGCCCAGGAAGCTCGGCTTGGCCTGAGGGCGTGTGATGGGAACGTGGACCACGCGGCTGTCCACATTGCCAACCGCAGAGAGGAACTGGACCAAATAAAGAAGGAGGAAAGAGAGAAGAAAAAACGCCGCCTGGAGAACATTAACCATTTGAAAGGAATGGGCTACTCCATGCGAGCAGCCAGGCAGGCACTCCATCAGGCCGCCGGGAACCTGGAGGAGGCCCTGAAGATTCTTCTCCATAATCCTCAGCTGTGGTGGTTAAATGATTCAGCTCCGGAAAGCAACAACCGTCAACAAAGTCCGTCTCAGGAAAAGATTGACCAACTGGTATACATGGGCTTCGATGCAGTCGCGGCCAAGGCGGCCCTGAGGGTGTTCAGGGATAACGTCCAGCTGGCGGCACAGACCCTGGTCCACAATGGAGGGAGACTTCCTCCCGACCTGCAGCTCTCGGCAGAAGACTCTTCGTCCACGCCGTCCACATCCCCGTCCGACTCTGCAGGCACCTCTAGTGCCTCAACAGATGAAGACATGGAGACAGAGGCTGTCAATGAGATCCTGGAAGACATCCCAGAACATGAAGAAGACTACCTTGACTCAACTCTGGAAGACGAGGAGATTATTATTGCAGAGTACTTATCCTATGTAGAGAACATAAAGTCGGCAGCAAAGAAGAACTAAGCGATGAACAGAAATAACTTAAGTTTCTGCTTATAAATATTCTATCGTTTTGAAGGTGTAATGCAGATCTTCTTCTTCCTTTTTACTGATTTTGCTGCAGAGTGCTGCTTTCTCGGGTGTAGGAGGGGCAGGTAGGGAACAGGGATGTAGAGAGTGAGAGACGGGGTGGGACAGGGTGCCGGTCCCCAGGGGTGGCCTTGGGAACTGAGCCGCCTCTGGCCTGACCTTGCTGTCGCCCGCTGCCTTCAGGTTCTGCGGCCTGAGCGCCACCCTCCCTGCTCGTGTGGCTCCCGGGGAGGGCTGCAGGAAGAGCGGCTGGGGAGGGGGAGGTGGACATGTCTCCCGCTCTTCCCCTCGCCCTGCGCTTCTGCCCTCTGGAACCCACTGCTTGGTCGTCTCCTCCGTCCCACAACACAGCCCTGCCTCCTGCTTCACCCTCTGCCGCTTCCTGAACGTGTCCCTTAGATCCTCAACTGTTTCAAGCGCTTTGGGGGCCTTTTAGAGACAAGGCATCAGCTATAGCAGCCACACCAGACCGTGACAGAGGCCTTCAGCCTGAAACAGCAGTGGTTTTTGTGCTTAGCCTAGTTAAGTAGAAGTTCCCCAGTGGCTCAGACGGTAAAGAGTCTGCCTGCAATATGGGAGACCTAGGTTCAATCCCTGGGTTGGGAAAATCCCCTGGAGAAGGGCATGGCAACCCACTCCACTAGTCTTGCCCAGAGAATTCCATGAACAGAGGAGCCTGGCAGGCTACATACAGTCCGTGGGGTCACAAAGAGTTGGACACGACGAGCAACTAACACTTAGCAAAGTAGGCACTTGAAATTCTGGGTGGAAATTCAGAATGTATATATATTCAGAATTCTTCTTTACAGATATAAAATCTTTTTATTAAACAGGAAAGTCTTAAATGCCAACCAAAGCAACTTACTTTTAATTAGCATTCTCAGATGCAGCACTGTCGTAGTAAATCCATTGCTGGCTGAGATGCCTATGAGAGATCTAAAATCTATTTTCTCCATGTCTTTGTGGGGGGCTGGGTATAATACAGAAGACTCTTTCTAAAGGTATGTAGTTACTAGCCTCCTAACTGCTCAAGTAACCGTTCTGAGTTGACCATGCCTTCCTCTGTAAACGTGTTATTAAATGAAGACCCTCTGCAGCACCAGGACACAGCCGGGAGAAGCCTGTGTGGAAAGAAACGCACGCCAGGTGTGTGCCCAAGACTTCCTGGCTGGCTGGAAGCTCCGCGACTGAGGGCAGATGGGTCACACAGTTGCCGTTGAGGGGCTGGCTGAAGTGCTTCTGCCGTGTCAGAAATCGTAAAGCTTGGACAGCAGGCTAGTGTGAACGGGTGGAAATCCTTTCTTGTCATTCTTTCAAAAATGGATGGTACAGGTGAAAATAAAAGACGGAAGATACATTCCAAAATTGTCAGCCTA EMBV3_12734 GACCAGGAGGAAGCTGCAGAAAGCGCTAAGGAAGAGGGTACTGCAAGGAATGGAGACAAT Gene BVT0102_131570 + 0 NULL GK000013.2:66314231-66334685 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043646 1 XLOC_025982 Coding TCONS_00043646 XLOC_025982 Coding Coding MYL9 13:66305642-66318203 j TSS32232 5186 1 TCONS_00043646_1 172 0.211338218279985 4 0.587420382165605 3.60925045155298e-12 3.19704458040461e-05 2.53387841043442e-05 2.05691284487518e-06 2.66565700667879e-05 0 1.44581463465567e-06 9.12409848166914e-06 2.18385119775154e-12 2.45849424660845e-12 1.12515833705242e-06 8.38664298156036e-13 0 0 1.73947553489751e-12 0.00307718053662826 0.00233945316797552 0.00292029353763337 1.77815470928927e-06 3.23523863680018e-12 3.43243323041916e-12 0.000295984721014396 0.000881805954557594 0.0014807192016189 3.41269297430012e-06 1.68149151695988e-12 1.44209980887044e-06 5.66932632589006e-05 2.2499850087671e-05 0.000190800237155657 NM_001075234.1 MYL9 Bos taurus myosin, light chain 9, regulatory (MYL9), mRNA. 0.0 2104 99.91 0.225221750867721 NM_006097.4 MYL9 Homo sapiens myosin, light chain 9, regulatory (MYL9), transcript 0.0 854 87.36 0.134593135364443 TCONS_00043646_1 sp|P24844|MYL9_HUMAN MYL9_HUMAN Myosin regulatory light polypeptide 9; 2e-125 354 99.42 0.994186046511628 5 coding 0 0 0 0 0.0142006780230542 0.907142320203115 0.00678796183574998 0.880873069260297 AGTGACTTGGCCCAAGGCCCTTGGGCGCCCCACCCCAGCAGGAACCTGGAAGCCCCACACGCCTGCAGCCAAGATGTCCAGTAAACGGGCCAAGGCCAAGACCACCAAGAAGCGGCCACAGAGGGCCACGTCCAATGTGTTCGCGATGTTTGACCAGTCCCAGATCCAGGAGTTTAAGGAGGCCTTCAACATGATCGACCAGAACCGGGACGGCTTCATCGACAAGGAGGACCTGCATGACATGCTGGCCTCAATGGGGAAGAACCCCACGGACGAGTACCTGGAGGGCATGATGAGTGAGGCCCCAGGGCCCATCAACTTCACCATGTTCCTCACCATGTTTGGGGAGAAGCTGAACGGCACAGACCCTGAGGACGTGATCCGTAACGCCTTCGCCTGCTTCGACGAGGAGGCCTCAGGTTTCATCCATGAGGACCACCTTCGGGAGCTGCTCACCACCATGGGTGACCGCTTCACAGACGAGGAGGTGGACGAGATGTACCGAGAGGCGCCCATTGATAAGAAAGGCAACTTCAACTATGTGGAGTTCACCCGCATCCTCAAACACGGCGCCAAGGACAAGGATGACTAGGCCATCCCAGCGCCCCCTGCCCGGCCCCTGTCCCAGCCACCTGCTCCCACATATACCGTATGCACCAGCTCCATGCCCATGAGCCCAGAGCCCCCTCTCAGAGGACTCTCCCCCTGAGGGGCCGGGGGCCCAGCTCCGAGTGAAGGAAACGGGCTGAGAAAGCACAGCACCAGGCCAGGGGCAGAGCCAGCGGGAGGCCGGTGACCCTCCAAGGAAACCCCATCTTCTCGGGAGCTGGGCCAGGGGGCTGGACCGGGAGGCCCCGAGGGGAGGCCCCTAGGAGAGCCCCAGCCTCGGCTGTTGCCTGCCCGCTTCCGGGTGCCCCCACAGGAAGGGCGCTGTGTCCTGGTCTGGGACACCACTCCACTTGCACCCCCGCTGCAAGCCCTTCCCCAGCCACTGCCACAAACACGAATCTCACCGAGGTCCCCTCTCAGAGGACAGGGTGCCACTCCCCTCCCCGACACCGCACCCCCCCCCCCCCCCCCCGGGAGTGTGCTCTGGAAGATGCAAGAGGGCGGACGTTCATCTTGGGGAGGCAGAGCCTCTAATAGAAGGTTGAGCACTGCTTTGGGTGTGTATGTCTGTGGCTGGGGTGAAATAAAGGTGCCCTGAGGCCCCAAACACCTCCCACCCTCTCCTTCCCCAGTGGCTGCCCTGTCCTTCCCTCCACCCCAACTACAAGCCCAGGGAAGGCTCAGCTGAGACCAGACCAGCAGCAGGAGCAGGCAGATCCTGAGGGGAGAACCTCTCCTGGGAGGGAGCGAGCAGAGGGGGCAGTACCCACCACAGCAAACCCCAGTGGGGGTTCTGAGGCTCTGAGAGGGCAGGGGTCAAGGTCACAGCCTTCAGGACTAGAGCCTGGTCTCCAGGGTCCCCTCAATGCTCCTGGGAAGCCAGGTGGTCCTAGAAGAGCAGGGAGACTTTGGGAGCTGTGAGGACGGTACATCCCCTTCATTCGGGGATGGAGATGAGAAAGAATAGATTCCCTGCGGGCAGATACCAGGTGTCTGGCTGCACCCTCCACCGCTGGAGGGTCGGTTCTGCCACGTGACCAGCAGCACAGCAAGCCACAGCTTTTCACATCCCACACGTGCAAGAGACTGGCAGGACTGGGATCCCTGTTACAGCTGACAGTGGGGACACTGAGGACGGTTCCTGGAGCCTAAGGGGAAGGGACATACTGGTTGAACAAAGTCAACAGGGACAGGGACCACCTGAGGTCACCCGGTGGGTCTGGGGCAGAGGGAGAGCTGGTCCCTGGCCTCTGGACCTTCCATGGGGTTCAGGCCAGGACTGGACACATCCCATCTGCAGCCAGCAGGGAGCAGGTGCTGCTGCCTTCCCTAAAGGTGTGAGATCAGAGCCAAAGGAGCGCCGAGCACTAAGGGGACCCTGCACTGGCCGAGGAAGCCGAACCTCCTCCAGGCCACTGCCCCAACGTAGGCACCCAGCCCCTTCCAGAAGAAAGCCACGAAAGCCCTTCTCTTGCCTCCAAACTGAGCCCCACAAATCCCTGAGGTCAACTTTAGATTGAGCCAGCCCCAAACGAGTTCCAAACGGGTCCAAATGCTCCCCAGACTCAGTCCCAACCACACCATACCCTTGACTGACCCCAGGCTGTGGGCCCTGAGCAACCCTCATCCCAACCTGACACTGAGCTTGGCTACCCACTCACTGGGACCAATTCCCGGGACTCCCAGAGCACTGGCCATGCATGCCGGACACCAGGGTCCAGGTCTCTCGGTGGAGCCACAGTGGTACCAAAGGCCTTCCTGAAGAAGGCAGGGACATGGGGTCAGGAACAAACCTCCTTGGTCTCAACCCCCAGTGGTGTCACAAGCCTCCTCCCCCTCCACCCCAGAGAGAAAGATTCACACCCAGGGGTGGCAGGATGGAGCCGGTGCGGCCTCACCGGTTTCAGAGCTGGCGTGGGCTGAAGGAACCCAGGTGATGGGAAGAGGGAAGTGTTCTGTGTGTCGACGGGCAGGACCAGGAGGAAGCTGCAGAAAGCGCTAAGGAAGAGGGTACTGCAAGGAATGGAGACAATCTGAACAAAAGTCCAGGAACAGGAATGCATGTGGCACAGACGTAGGACCCAAGAGGAAGGCGGTTTTCACTCATTAATTTATTACCATCTCACAGCAGCCTCAGAAAAGCAGCAGCAGCTGTTTTATTTCTTAGCGAAGGACCCCTAAAGTTGCGATGTCTGGCACAAAACTCAGAAGAGACACATGCGCGCGTGTGCACACAAAGACCAGTGGACTTAAATGATGAAGACGGAATGTTTCCGTAAGGCCAGAGAAACTGAGCAAAGTTAAAACCGAGGACAGATGGGGAGAAAATATTTGTAACACAACTAATTTTTTTTAAGTTAATGACACTATCCTATAAAAAGAACTTCAATCATTCAATAAGAAAAAGGGAATTTCCTGGTGGTCCAATGGTTAGGACTCTCAGGCACTTTCACTACCAGGACCAGGGTTCAATCCCTCATCAGGGAACTAAGATCCCTACAAGCCAAAAAAAAAAAAAAGCCATGTCAGTAGGAAAAAAATGGGCAAATAATATGAAAAAAAAAAAAATCTCAGAAGAAATACAAACACTTAATAAACATGCTTTATTTTATTGGCTGCATCTCAGTTCCCCGACCCATGTCCTCGGCCAGTGAAAGCAGAGGCCTGATCACTGGAATGCCAAGGAATTCCCTAAAACTCATTTTTTAATTAAAAAAAATTTTTTGTTTTATACCGGACTACAGTTGATTTACAATGTTGTGTTAGTAAAACCCATTTTTTAGAAATGGTGAATTTTTACTGTATTAAAATGAAACAAGGAATTAATATCTAAAAGAAAAAGTTGTAGAATCTAATAGACAAATAAGAAAAGTGTATAAACAGGAGACTCACAAAAGGGGAATTTCAACCAACAAGAAAAATCTATCAACCTCACTGGTGTTCAGAAAGCAAAAACAAGAGACCACCTCATACTCGTCAGACTGCCAATCAGAGACACAGATAGTACCAAACACTGGCAAAGATGGAGAGGAGGGGGAATCCCCATACGCTGGCTGATAGGGGACAGACTGGTCCCCCACGCAGGACAGCATTTGCCAGCATTTGTGAACAAGTGAAGCCCCTCTGGCTCAGAAACTCCACAGCTACAGACATCTCCCAGAAAAACTGGGGGCAAGCCCAGAGGGGCAGGACACCATGTCCACTGCCCCTGCAGAGATGGCAGCAGGGCCTTGGAGAGACCCCGAGAGGCCCCATACCTGTCACAAGAAGGAATGAGAAATGTGAGAGATGCATGCTGTGGAATACCATGCAGCATTCCGATGCAATGAGTCAATGTTCCTGCATCCACACAGACAGATATTAAAAGCGTCCCTGGTTGTGGGGAGGACAAAGCAATGTGTAGGGTGGGGAAAGGAGACACAGAACGAGTGCTAGCACCTAATAACGTAAATGTGATTTTTAAATGTGCGTGAGATTTTAAAACCAGCATCAGGGAACTTCCCTGGCAATCCACTGGTTAAGAAACTTGCCAATGCAAGGGACACGGGTTTGATCCCTGGTTTGGAAAGATTCCACATGCCGAAGGCAACTAAGCCTGAGCACAACTACTGAGCCTACATTCTAGAGCTTTCGAGCGTAGAGCCCATGCCCTGCAACAAGAGAAGCCACCACAATGAGAAGCCAGCACACGGCAATGAAGAGTAGCGCCCACTCGCCGCAAGGAGAGAAAGCCTACATGCAGCAACGAAGGCCCGGCACGGCCCCAATTGTTTTAATTTTAAAAAATTCATATAATTCTTCACATGCCCACCCCCGTTTCATAGATGAGGTCTAGGGGATCCAAGGTCACTGTGAAGAAGAACCAAGACTCAGACTAGAGGTTAAGTTGGTTAACCTATTATTACTGTATTTATTGGCTTATAAGATACAAAAGATGCACCCCAATTTTACATGGAAAGCTTTGGAGAAATAATTTTGAGGTCATAGGTAATATAATGGAATAATTAAGAGAACAAAATTAGGTTGCAGTCCTGGTTCTGCCATTTATTAACGGCATGAATTTGAGCATGTTATCTATCCTCTCTAAGGCTCAGTTTCTCTACTATAAAATGGGGATAACAGGGACTTCCTTGGCGGTCTAGTGGCTAAGACTGAGCTCCCAATGCAGCAGGCATGGGTTCCATTCCTGGTTGAGAAACTAAGATCCCGCATACCTTGCACCACGGACAAAAGAAAAATGAGGATAATTATATGCACCTCATAGAGTCGTTATAAGGATTAAATAAATTTACAGTTATACATAGAACAGTGCCTGGTACATAAAGTGCTACTTTTAAGTTATTGCATAAAACGAATCTTAAAATATCATAAAATGAATCTTAAAAACACCATAAATGAATCTTAAAATATATGCGTTGAATGTGATTTTAAAGTCCTTTTATAGAAAACACCTTTGTTACGTAAATATATTTCAGAGGATTCTAGTAGGAATTCATAAGCTCTGGAAAGAACAACAACCGTAAAAGCTAAGGAAAACAGTGACATAAATAACAAGATTTACCAGATTTGCCAGTAAA EMBV3_14175 AAGTCCCTCCAACTATGAGAAGCTAGAATACAGAAACCGGCTGGAAGAGACAGCTAGGGC Gene GeneID:525738|ADPRH:NM_001038554:89_cdna Constitutive 0 NULL GeneID:525738 1 GENE ADPRH MGC134587 ADP-ribosylarginine hydrolase EMBV3_14020 TGTAGAGAGTCCTGTTCAAGTCCATCTGCTGTTGGCCCTCCCCTAACGACAAGGAAAATC Gene GeneID:540919|LOC540919:XM_002693474:89_cdna UTR3_Alt 2 NULL GeneID:540919 15 GENE LOC540919 NULL similar to EMSY protein EMBV3_01998 TGAGGCTGTCGCCGCAGATCAACGCCTCCAACTTCTACTTTAACAAAACCAAGGGCTTCT Gene GeneID:538691|HS3ST1:NM_001076122:2_cdna Constitutive 0 NULL GeneID:538691 6 GENE HS3ST1 MGC142451 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 EMBV3_11902 CATCTATTCGGATACAATGACCTATTAGTAAGCCTCAGTTATCTTCAGAATTTGGATTTC Gene GeneID:782050|RNF219:NM_001105458:7_cdna Constitutive 2 NULL GeneID:782050 12 GENE RNF219 H12C13ORF7 ring finger protein 219 EMBV3_04339 AGCAAGTGGAGGGGGCGGCCCAGGAAGCGGCCATGGACCAGGTTGCCAAGACTACCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30460 GTGGCTTGACTATGAAGACCAGTGATGACCAATAGCACCTGGGGGGAGGAAGGTAGTCTT Gene BVV0102_141360 + 1 EMBV3_01359 GK000022.2:48838787-48841886 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15584 AGTGCTGTGGAAGAAAATGAGACATCAGTACAGCAACTGACCCAGAAGGCTGCACGGTAA Gene BVT0102_233891 + 0 NULL GK000010.2:25763426-25785914 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013180 TCONS_00013181 1 XLOC_008023 Coding TCONS_00013181 XLOC_008023 Coding Coding RAB2B 10:25748424-25764520 j TSS9821 2101 2 TCONS_00013181_2 170 7 0.869897483690587 0.00432214002608023 0.00750522056134736 0.00472389946040553 0.00339859093437836 0.00298224807534532 0.00187250345489393 0.00210867981599282 0.00211027731495742 0.00638285537158159 0.00464890426083057 0.00123990910437035 0.00202328036829329 0.00252555506369774 0.000516205940962871 0.00187980129331195 0.00191553379424738 3.9508035780543e-05 0.00173164016612283 0.00525458023450672 0.00572810834701887 0.0036242870976867 0.000461750079259182 0.000292748975739672 0.00108519003667759 0.00196301912972061 9.21472599050174e-08 0.00353345041283409 0.00102324211180644 0.000490579172033731 0.000891152863141871 NM_001192665.1 RAB2B Bos taurus RAB2B, member RAS oncogene family (RAB2B), mRNA. 0.0 3727 99.95 0.984293193717278 NM_032846.3 RAB2B Homo sapiens RAB2B, member RAS oncogene family (RAB2B), transcript 0.0 1157 91.46 0.389338410280819 TCONS_00013181_2 sp|Q8WUD1|RAB2B_HUMAN RAB2B_HUMAN Ras-related protein Rab-2B; 2e-119 341 95.88 0.994117647058824 3 coding 0 0 0 0 -0.0556671916568495 0.610461771095557 0.0210763751905923 0.807400120922699 AGCAAATGGAAGAGCCATCCCAGACCTAGAATAAAAGGCGTGGAGTTTGGGGCCCGTATGGTCAACATTGATGGAAAACAAATCAAACTGCAAATCTGGGATACGGCTGGACAAGAATCCTTCCGTTCTATCACCCGTTCCTACTACAGAGGAGCAGCCGGCGCACTGCTGGTGTATGACATTACAAGGCGTGAAACCTTCAATCACTTGACCTCATGGTTAGAGGATGCCCGGCAGCACTCTAGTTCCAACATGGTTATCATGCTGATTGGGAACAAGAGTGACTTAGAGTCTCGTAGGGATGTGAAGAGAGAAGAAGGAGAAGCCTTTGCTCGGGAACATGGACTTATATTCATGGAAACTTCAGCCAAAACAGCCTGCAATGTTGAGGAGGCCTTCATTAACACAGCCAAAGAAATATATAGGAAGATCCAGCAGGGTTTATTTGATGTCCACAATGAGGCAAATGGCATCAAGATTGGACCCCAGCAGTGTATTTCAACCCCAGTGGGACCCAGTGCCTCCCAGCGGGGCTCTCATGACATGGGGGCTGACTCTGGCTGCTGCTGAACAACTGGCCTGGACTCTTTTTTTTCCTTCCTGGAACAGCTTCAGATCAATAGGCTTAAAGAAAGAGGTCTTACATGCTTTGGCTGAGAAAAGCCTCTTTTCAAGGTGTGATGTTTTGCCTCTCCACTTAAAGACCAGGGGAGAATTTGGGCCCTTATTGACCTGTCCTTCTTCAGGGACGTGAGCGTTCCCTATAGATTAGGGCTCTTTTCATTCTCCTGTTTTAATTTGTAAAATGTTAGGATCAAAGCTGATTGTCATGGTAGTTCAAAAATAAATTCTTTTATAAGCAGACACAATCTACTCCCCACCAAGAATTAGTAACAAGGTCTAGGACGTTCTGCTTGAGCCCTTGAGGTGACTGGGATCTGGCTGCCCTTTGGGTTTTATGTCCTCAGTTTAGGGATTTCATTGAGGTTTTTCACTTGCCACTACATAAGAATTGTTGCAGAAGGCAGTTCCTTCTAGTTGAACTGCTCAAGGATGATGAACACTTCTCCTCCATCCCATTTCTAGTTTCTCTGTTTCAGAGTAACTACACAACTTTTGAGAGTAGTAGAGTTGGTCCTAGCCTTGTAGCCACTTATTATCATTACCTAAAGAAAACATCTTTCCCTGTTTGTTTTGTTTTAGGGACCAGACCTAACATTGGTAAGTCAGTGTCTTTCACCAAATAGACTCTTACTGTTTTATCCCACTCACTTCTTAAGGAGACCTATTTAGACTTTCTATCAAGCTAATCTGCCTACTGTACATGACATTTTGCTTCCACTCCTATGCCTTTGCACATGCCCTACTATACACTACTGTTATACTCAAAGTCCACATTTTTTTCCTTCAGAAAGCCTTCTTTGACCTAGGGACTTCGGAACAATTACTGACACAGTACCTTTTAGCTTTCATATATTGTTTATTCATATGTATATTTATTTGTATTTATGTTACTTTGTAAATATGTTTTATAGTAGCTTTGTGTGTGGAACCTGTCTCCCTGAGGTTGTAAGCTCCCTGAGAGCAGGAACCCCTGGTATGCTTTCACTTTTGTAAACCACTTCCTCCACCATTCCTTCACAGTGCCTAGTGCTACTCATGTGATCACTGAATTTGACTGACAAAGACTTGGAACAGGTTTATTTTAGGCTGCAGAGGAAACAAAAAGCCTTACAGTCATCTCTTTGTAATTCTATCTCAGTCTATTCCATCTGCTTACCCTGAATTCTTTATTGCTCTTCTCCTTCTCTTCTCTCTGCTTTCCCTGGCTCTTTGCCTCCATTCCATGCAGCATACAATAAAGCTGCCTGCTTCCAAGCAGTCAAATAAGTGGATACATCTCCATTTGAAGAGCATACAATACTATCCTAGTCAAGTCTGTCTTTGCTGTACTTACCGTGCAGCCTTCTGGGTCAGTTGCTGTACTGATGTCTCATTTTCTTCCACAGCACTGCGGTCTTGTGAATTTTTTTCCTCTTTTTTTTTGGTTGTCGATAAATTGTTTCATTATTAAATATATGCATGTATCCAAGCTGCTCAC EMBV3_22963 AGATCACTTTATGTGTGACCTGAACCCTTTGCTCGGTCTTGCCTGCACTGATACGCACAC Gene GeneID:513867|LOC513867:XM_002693593:72_cdna Constitutive 0 NULL GeneID:513867 15 GENE LOC513867 NULL similar to olfactory receptor MOR232-3 EMBV3_13660 TCTGTCTGAAGGGTACCAAGGTGCACATGAAGTGCTTCCTGGCCTTCGTCCAAGCGAAGA Gene GeneID:515783|CLEC3B:NM_001046212:119_cdna Constitutive 0 NULL GeneID:515783 22 GENE CLEC3B MGC137230 C-type lectin domain family 3, member B EMBV3_31891 GGTAGAGTTCCTCCATCAAGAGAAAGACCACCACTACCTCCTTGTGAGCCTATACTGCCA Gene GeneID:281737|CYLC1:NM_174302:120_cdna Constitutive 0 NULL GeneID:281737 X GENE CYLC1 NULL cylicin, basic protein of sperm head cytoskeleton 1 EMBV3_08261 GATACCCCATCAAGGCACCCAAGCTGCCAGGGGTTGGCCCCCAGGCTGCAGCAGCAGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24246 ATCCCTGTAGATGTCATGAGACGAGCTGGAGGACCTTATGATGTGGTGGTTCTTCCAGGA Variant GeneID:511268|PARK7:NM_001015572:55_cdna 195^296 1 EMBV3_18441 GeneID:511268 16 GENE PARK7 DJ-1 DJ1 Parkinson disease (autosomal recessive, early onset) 7 EMBV3_08192 GTCCATCCTAATGAGTTTTCTGTTGCACCTGCTTCTTCCCTGGGTTCCACAATGCTAAGC Gene GeneID:281969|PDE1A:NM_174414:5_cdna UTR3_Alt 2 NULL GeneID:281969 2 GENE PDE1A PDE1 phosphodiesterase 1A, calmodulin-dependent EMBV3_18357 GTTCCGTGTGGGATTGGGACAAATGCTTCACCAAGAGCATGTGACCATCTGCGTTGTACA Gene GeneID:614744|LOC614744:XM_002692813:136_cdna Constitutive 0 NULL GeneID:614744 14 GENE LOC614744 NULL similar to Uncharacterized protein C8orf37 homolog EMBV3_27262 GTTCAGCTTCTTCCACTATGAAATAAGAAAACCCACTTCAGTGGCGGCATCTGCCCCCTC Gene BVT0102_193600 + 1 EMBV3_15778 GK000009.2:78326516-79261116 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05793 CTCGGGCCAGCAGATCTTTGCCCTGGAGAAGACTTTCGAACAAACGAAATACTTGGCGGG Gene GeneID:616211|NKX6-1:XM_002688392:43_cdna Constitutive 0 NULL GeneID:616211 6 GENE NKX6-1 NULL NK6 homeobox 1 EMBV3_00693 CTAGGTCTGGCTTTACAAAGTGTACAGAAATGGCACTTCCGTTTCTCTGATGCTTCCTGG Gene GeneID:506060|CSNK1G2:NM_001101056:32_cdna Constitutive 0 NULL GeneID:506060 7 GENE CSNK1G2 NULL casein kinase 1, gamma 2 EMBV3_33444 AACAAGATGGGTCGGTGGCTGTGCTCCCTGATTGGGATGTTGGTAGTAGGTACCAGCTTA Gene GeneID:617708|SLC18A1:XM_002689757:2_cdna Constitutive 0 NULL GeneID:617708 8 GENE SLC18A1 NULL solute carrier family 18 (vesicular monoamine), member 1 EMBV3_05985 GGTGAAAAGACACCCAGTGGCCCAATGTCAAGAAAGAAAAATTTTTAGCAGTATAGTAAG Gene GeneID:781252|LIG4:XM_002691989:81_cdna Constitutive 1 NULL GeneID:781252 12 GENE LIG4 NULL ligase IV, DNA, ATP-dependent EMBV3_08586 TCATTAAAGCCCAGACGCTTCAGGACAACTCGACCATGGGCTACATGATGGCCAAAAAGC Gene GeneID:783577|LOC783577:XR_084151:17_cdna Constitutive 0 NULL GeneID:783577 X PSEUDO LOC783577 NULL similar to 90-kDa heat shock protein beta EMBV3_28158 ACGGTCTAATACTGTTCTAGTTAAACCTGATGGGAACTGATCAAAGCAACCCTCCACCAG Gene BVV0102_158903 + 0 NULL GK000028.2:12812575-12887158 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41740 CCCCTGACTTCCACCCAGGAGGAGGAAACTTCACATAGCTGTGCTCACAGTTTATTATTT Gene GeneID:281490|KDM5C:XM_002700121:47_cdna Constitutive 0 NULL GeneID:281490 X GENE KDM5C JARID1C SMCX lysine (K)-specific demethylase 5C EMBV3_39358 GAAGAACAAAACTAACCAGAGCACAGACTGGGAAAAAACTGAAGCACGGTGCCAACTGGG Gene BVV0102_098988 + 0 NULL GK000001.2:3580287-3783272 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29250 TTCTCCTTTCATACTTGTTAGGATTTGTCTTACATACTGCGGTGCTCCCATGTTGGGTGG Gene BVV0102_386149 + 0 NULL GK000025.2:12233646-12923481 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189806 TCONS_00210178 TCONS_00010367 TCONS_00218852 TCONS_00032587 TCONS_00141355 TCONS_00088289 TCONS_00207228 TCONS_00031938 TCONS_00078532 TCONS_00073692 TCONS_00089425 TCONS_00116799 TCONS_00098385 TCONS_00177994 15 XLOC_115843 XLOC_128688 XLOC_005918 XLOC_132171 XLOC_018827 XLOC_085783 XLOC_053076 XLOC_125746 XLOC_018183 XLOC_047420 XLOC_045454 XLOC_054210 XLOC_070965 XLOC_058631 XLOC_107767 Coding TCONS_00098385 XLOC_058631 NonCoding NonCoding - 19:5561093-5568721 - TSS72761 7628 6 TCONS_00098385_12 120 0.998820136339801 1 0 0.000472619384593992 0.000590112042379123 2.48698695252058e-05 6.19364967480683e-05 0.000262146668812916 8.23029148281041e-05 0.00017655106870438 0.000519719701354573 0.000316005689189621 0.00267620150743071 0.00246585130508771 0.00166543058682877 0.0010389308090448 0.001820917924053 0.00190811198114119 0.000274005677828412 4.6791762896366e-05 3.93696793448302e-05 0.000109342062985342 3.42928136903365e-05 7.04630609765089e-06 0.000202023784082533 0.000510413535597794 0.000290760511169636 0.000117659439792513 0.000218954540986896 0.000321718724345108 0.00197050180976411 0.00142749961532966 0.00144453398084447 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2349 88.75 0.234399580492921 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 9e-63 248 77.54 0.0431305715783954 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACTGGTCTATTGTATCATTTTAAGTTTGTGTTTTCTTGTTAATTTTCTGTTTAGTTGATCTATCCATAGGTGTGAGTAGGGTATTCAAGTCTTCCACTATTACTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATATTGCGGTGCTCCTGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGACCTTCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTTGTATGTGTCCCTTGTTTTGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCTTTGCCATTTACTTTATTGTTTTGGGTTCGAGTTTATACACCCTTTTTGTGTTTCCTGTCTAGAGAAGAGCCTTTAGCATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTAAAGCTTTTGACTTCTCCTTCATATTTGAATGAGATCTGTCATGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCGTGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGGAGAGAGAGAGAGTGAGAGAAAAGAGCGCACGCACGCGGGAGAGAGTCCGAGAGAAAGTGCTTTGGCTCCTCCTTTTATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAATGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTGTTCTACCTACCTAACATTCCCCCCTCAAGAGATGGGAGGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGGTGGCAAGGGATATTGGGCCTCCCCCTCTTTCTAGTCTCAAGCCTCAGAGTCCTTATAGCGGTGTCCAAGTGTGTGTGATATTTTCTGTGGTCAGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTAGTTGACCTGGGCAGAGACAAAACAAGTTAGACAATTGACAGTACATGGAATAATCATAAGCATCATCAATATAGCATAACAAGGACTAGTAGGGACATTCGTCAATTTTAAATTCACATTGCCAGGATAGCTCAAGTCCCTCCTTATTCAGGAATCAGAAGATCTATCTCCTGTCTGTCTTGGAGTACAGTCTCTGTCAAGCTGTGTTGGCTCCTTAGAGTTATCCTGAGAAATCTTATCCCCAGAAACCAGGTTTTGGGGGTGTTCATTAGAATGACATTCATTGGTAGTTCTGAATAGGTATCTGAGATCTCCCAGGGGCTCACAGGTGTATTGAGTGTCCTCTTCTGTTTTTTTCCATGGCTTGACTCGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCAGTAGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAGTTGAGCCTTTGGGGACCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCCTGGAGCATATAGTGGTGACTCTTTAGAATCTTTTGGGTCCTTGTTCATACCCCACAAGCGTATATCCTGTTGGAATTGCCCAATGGCCATGGTATAAGACTGGAGGGTCTGAATCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTCATAAGGACTAAGACCAATCTGTTCCTTAGGGGCAATGCGGGTGCAGAAGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATTGCTGATTTTAAGAATTGATTGGCTTTATACTTTTCCTGAAGATTGAGGCCTCCATGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACTCCTCGGGTGACCTTAGAAGTAAATGATGTCCCATTGTCATTTTGTAATGACCTGGGCAGCCTTAGCCTTCTCGGTCCGGGTGGGAAAGCCTTCAATCCATCCTGTGAATGTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGTATCTGGGTGAAGTTCATCTGCAAGTCCTCTCCTGGGTAGGCCCCACGTCGTTGGACGGGCTGGGCCAGCTGGGGTCTTCGAGCTCCTTGGGGGTTGTTTAATTGGCAAGTGCGACAAGAGGAGACAACCTGTCTTATAGTTGTTTGGAGGCCTGTTCCTCTGAAGGACCTTTCTAGTCATCTTTGGAGGGCTTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTTCAGGCAGAAAAAGGAGTCCCTCCTTTTGGAACCACCCCATATGATCTTCTCGAAAGCCCTCGCTGTTAGCTTTAAGAGTCTCACCTTCAGTATATGAAGGAGTTTCTGGCAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGCTGCTTGGTTCCCTCGTGCCACTTCCATGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGCAGATGGGCTGCCTCCAAGAGTCGAAGAATCTGATCACCATATTTGATTGGGGACCCTCGGGTGGTCAAGTGACCCCTTTCTTTCCAAACAGCCGCATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCATACCTGGCTCTTCTTTTTCCATCCAAGACAAAGCTGCTTCCATCAGTGTACCAGATTTCCTCAGGATTGGTCAGAGAATCTTCTGACAATCCCTCTTGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAAGAGTGAAATGGAAGAGAGCCCTCGGGGGTAGGGAGGAGGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGGATTTTCCATCAGCATTACATGATATCTGAGGGTTCTTTGATCAGACATCCATAAATGGCCTCTCCCATTTAGAAGTTGTTTTACTTGGTGGCTGGTAAAAATAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCTAAGGCAGGGGGGCCAACCTTGGGAAGTTGGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATCCCACTCCCAAGGTTATTCCCTCTCTTCCATGGACATAAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGAAGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCTTCTGCCTCCTTTTGAGGATTTCCCCACATCAGTGGGATTGAATCATCTTGTCCCTTTAAGCTTTCATATAAGGGCTGGGCAATTAGACCATAGTTGGGTATCCAGATTCTACAGTAACCAGTTAGCCCCAGGAAAGCTCGCAATTGTTTTCGAGTTGTGGGGGAGGGCAACTGGAGAATTCCTTGTACCCCATCAGAGGACAGCCTCCTGGACCCGTGTGTAATCTGAATTCCCAGGTAAGTGACCTTTGTCTCGACCATCTGTGCCTTAGTATGGGAGACTTTATATCCCCTTTCTGCCAAGAAGTTTAGAACCTGAATTACATGTTGTTGGGCGCTTTTCTCATCTGGAGAGCAGATTAGTAGGTCATCTACGTATTGTAATATTTTCCCATTAGGTCCCAGGTCCAGATCTAGGAAATCCCAGCTAAGGGCCTGTCCAAACAGGTGGGGGCTATCTCTGAACCCCTGAGGTAATACTGTCCAAGTCATCTGTTGGTGTTTTTCTCCTGGGGCCTCCCATTCAAAGGCAAAATGTTATTGGGATTCTTTAGCCAGTGGTATGCAAAAAATGCATCTTTGAGATCCAAGACAGTAAACCATTTGGCACTGGGTGGGATTTCTCCCAAGATTACATAGGGATTGGGTACTGTGGGATGGAGGGGGACTACAGCTTCATTTATAATCCGGAGATCTTGAACCATTCGCCAGGTTCCGTCTTTTTTCTTTACTGAGAGGATTGGGGTGTTACATGGTGAACTGGTAGGGACCAATAGCGCACAAGTAAGGACTTTATTTATTAAAGGCTGTAGTCCCTCCAGAGCCTCTCTTTTGAGAGGGTATTGTTTCCGGTTAGGAAACCGAGTGGGATCTCGGAGGACAATGATGACCGGTTCAGCTTGGTGGGCTCGCCCAGGAATCCCCTGGTCCCACACCTGGGGGTTAATTTTGTCTTCCCATAGTTTTTGGTCCCTCTCTATTGAAGGTGTAATGGGTTCTTCAGTAGTAACCAGGAGCTGTAGAGCTCTAGGGGCTGAAAAAGTTCCCATCACAAGGGTGGTACCCAGTTTAGTGAGTATATCTCTTCCCAATAAGGGGATAGGACACTCAGGGACCACCAGAAACTGGTGGGAAAATATTTATCCATCCCAGCAACAAAGAAGTGCTTGGGTGAATCTTTTAGTAGTTGCTTTTCCTGTAGAACCCAAAATGGTACAGGTTTGGGAGGAGAAGGCTCCGGAGTAGGAGATCAAGACAGAGTAGGTAGCCCCTGTGTCAGCCAAGAAATTCTCGGACCTACCTGCCACATCCAGTTGCACCCTTGGCTCCAGCCCCGTGATGGTCATCTGTGACAGGCGGGCTGGCTGGAGTAGGCCGCTTCAGTCCTCTTGAACCATAGTGAGGGAAGGCTTGGCACTTGACCTTGAGGCTCTTGGGTCCCGAGGGCAGAGTGCCACCTAATGTCCCAGTTGATGGCATTTGTGGCAAGCTGTTCTAGGAGACTTGTCACGGTTTGGACACTCTTTGGCCCAATGCCCCACCTGTCTACAGATCAGGCATCTATCTCGTGCCTTGTCTCTCAAGGACTCAGGGTTTGCCATAGGGCTTCTCTGGAGGGCGGCCAGCATCTGGGCATGCCTTGTCTCTTTCTTTCTCTCCTTCTCCTGGGCCTTGGCCTCCTTCTCCTGTTCCCTGTTATAAAAGGTATTGGTGGCTGTCTGGACCATCTCATCTAAAGAGGCAGCAGGGTCCTGCTGTTGTAGTTGCTGTAACTTAATTCTGATATTTGATGCACATTGGGACAGGAATTTGTCCTTTAAAATCACCCGTCCCTCTTAAGAGTCTAAGTCCAGGTTGGTAAACTTTTGGATGGCCTCTTTTAGCCTCTCCAGAAAGGCAATGGGGTTCTCACTGGGCTCCTGAGTTATTGCTGAGACTGGGCACAGTCCCACAAGTAGTAGGCTTTTTTTATGTTTCCATGGGTGGACTTCCTTAGGGAAGTCTTTCTAAAGCTTATCCTACCCAGAATGGTTGCAACCTGAGAGCCAGGCGTCCCTGGGTCAGGGTGCAGATCCCCAGGCAGGCTGAGGCATGACAGCCTCCTAGAGATCCAATCCCCGGGCAGGTTGAGGCGTGACGGCCTCCTGAGAATTGGGTCTCTGGGCAGGTTGAGGCGTGACAACCTCCTGGGACCCCTGGACTAGAGGATCCCCGAGCAGGTTGAGGCGTGACAACCTCTCAAAGACTGATCCCTAGGCAGGTCAAGGCGTGATGACCTCCTGGGACCCCCCGGACTGGAGTTTGGGCGTCCCCAAGATCTCCAGTGTGACCAATATTGGGTAGGATTAGGGGTTGGATATTATAGAGTATTTCCCTCCCAAGGCATGAAACAGGAGGGAAGGGGGCAGAGCACAAACTTTGAAAGAATGACATAAACCAATTAAAATCAATTGAGTCCAAGATGACAAGTCAACTTCAAGTAAACCTTAATCCCCAATCTATAAGCCAACAGACACACCCAGAGGTGGCAGGACAGCTCCAAGGCACAAGATCAGAAGAGGGAGAAGTGGGTGGTTCCCCAATGGCTGGGATGATCCTCTCACTCATTAGCATATGAATTCCATCCCCTCACAAAACCTAGCCAGGCCTAATACCATGGCCGCAGCCCTTGCCCTCAGCAATGGTTCACACCCTGAAGAGTGGCTTCTCTCTGGATCCTAACAAATCTACCTCTTATCGCTTTGTCTCTCAATGAATTTTTGCAATGAGACACCAGAGCCTGAATTTCACTAGTTTTGGCCGGGCTTGAGTCCCGGGAGAGAGCTGAAGGACAGGAGGAAAAAGCAGTGGGAAAAACATGCCAAGGAATCCCCTTCATAGCCCGCTGGAAAATTTGCTGAATATCTGACCGGTACTCACAGTTTCATTGGTCTAATCTTTGGCACAGAGAAGAGAAAGGACAGAAGAACCCCACCGGCTTGTGTAACAGCTACTGAGGCTCAGTAGATAGCGCCTTTGGGACATGCTGAGGAGCAGCCTCTCCCGAGTCCCTCAATTGTGCCCCTGCCGCCTGCCTGTTCGCAGGAGGTTCGAGGAAACAAGAAATGAGAGATTGTAAAGGTCCCTCCAGCCATAGGAGCGAGGACCTCTTACCTTAACCGGAGGTCTTCTGGAATCTGAGACTGGGCCACGTGAGCTTTCTGCTGAGTTCGTTTTTCGCTGTCCCGGTTTCCAGCACGATGGGCCTTCCCCTGCTCTGGGTTTCTTCGTCTTCTGCTTCTAGCGCGGGAACTTCGCTGAGTTGGGCTCCTGCTGTGCTTGGCCTCTTCCGCGAGGAGGTTGTTTCAGCCAGGTTAAATCCGAGTCACGGCACCATAGATGTCACGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCATGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAGAGGGAGAGAGAGAGAGAAAGAAAAGAGTGCACGCACGCGGGAGAGAGAGTCGAGAGAAAGCGCTTTGGCTCCTCCTTTTATATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTCAGCCAGGAGTGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCACCATTTTGGACTTCTTTCCCCTATTCTACCTACCTAACAGATCCTTGCTGGGTACAGTAGTCGGGGCTGTAGGTTATTTTCTTTCATCACTTCAAGTATGTCCTGCCATTCCCTCCTGGCCTGAAGAGTTTCTATTAAAAGATCAGCTGTTATCCTTATGG TCONS_00092057 . 3' 38382 TCONS_00092057 . 3' 46009 EMBV3_00947 GGTGACCAAGTGAGGCCAGTGCTCATCTACCATCTGAAAATCCTGGGCCCTTAAGAATCG Gene BVV0102_056067 + 1 EMBV3_19222 GK000023.2:52015704-52050984 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11089 CAAAGCGGCAAAACGAAGGAAGATTATTACATACTCAGGAGAGCTGCTTTTGCAGGGTGT Gene GeneID:505914|C9H6ORF115:NM_001166561:2_cdna Constitutive 0 NULL GeneID:505914 9 GENE C9H6ORF115 MGC128733 chromosome 6 open reading frame 115 ortholog EMBV3_06265 CCCCATACTTTGTATTGGAGAGTACAATAATGTAAATCCTAAAAGCACCACTATTTTAGC Gene GeneID:327708|RAP1B:NM_175824:16_cdna Constitutive 2 NULL GeneID:327708 5 GENE RAP1B NULL RAP1B, member of RAS oncogene family EMBV3_33601 TTTGAGGATCAACGGTGTGTCGTCCCACTGCACAGCTGTCACCGTTTTCTGGATGGAAAA Gene GeneID:282115|UPK3B:NM_001012672:50_cdna Constitutive 0 NULL GeneID:282115 25 GENE UPK3B NULL uroplakin 3B EMBV3_10674 GGTGTGCTCCCTGCTCGTGGCTGGGGTTTACCTGGTGGGAATGATAGATGGTTTGATAAA Gene GeneID:789293|LOC789293:XM_002707732:138_cdna Constitutive 0 NULL GeneID:789293 15 GENE LOC789293 NULL similar to olfactory receptor, family 5, subfamily W, member 2 EMBV3_41999 CGGAACCTGGGCAGTAAAAGTGTAAAGTCCTAAACACTGGACCACTAAGGGATTCCCAGG Gene BVV0101_030388 + 0 NULL GK000018.2:56729592-56740588 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26528 TGATACAGTGGCGGAAGATGCTAAGAGAGTCCTGGCTAAGATTGAGGAGATGAGGTCTGG Gene GeneID:521987|IFI47:NM_001034545:8_cdna Constitutive 0 NULL GeneID:521987 7 GENE IFI47 MGC126992 interferon gamma inducible protein 47 EMBV3_15568 TGGCCTGCTCTGACATTCGCTTCAATAGCTTCTATGCCCTGGCTCTGGTGGTTTGTACCT Gene GeneID:783671|LOC783671:XM_002693348:265_cdna Constitutive 0 NULL GeneID:783671 15 GENE LOC783671 NULL similar to olfactory receptor Olfr624 EMBV3_42935 CCGTGGGGGCCAGGAGCGGGTGTGTAAATATGTGTGAACAAGCACTTCTCATCAAAAGGA Gene GeneID:528603|ZNF618:XM_002689941:102_cdna Constitutive 0 NULL GeneID:528603 8 GENE ZNF618 NULL similar to Zinc finger protein 618 EMBV3_12315 TGGATAAGGCTAGGGGTGGCTGAGTGTATTGACTGCTTTTCCACATGACTCCCGAAAGCG Gene GeneID:360194|POFUT1:NM_001043343:800_cdna Constitutive 1 NULL GeneID:360194 13 GENE POFUT1 NULL protein O-fucosyltransferase 1 EMBV3_06972 AGCAGGGCCAGACTCCATATTACAACCAGCAGCCTCAGTCTCAGCCACCGCAGCTCCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00133 CTCCCTGGACGTCTGTGTCTTCATTTCTTAGGCAGGCGTGATGTAGTCCTATGGACCTCA Gene BVT0102_034920 + 0 NULL GK000006.2:91723398-91856364 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203768 TCONS_00203770 TCONS_00203769 1 XLOC_124266 Coding TCONS_00203770 XLOC_124266 Coding Coding PARM1 6:91597121-91727722 = TSS152577 5676 1 TCONS_00203770_1 300 0.0431642001409443 4 0.956569678407351 0 8.78352599812842e-10 8.36215668922961e-10 1.1728553888556e-05 4.94519663625895e-05 0 8.02801875792117e-05 6.41985579373506e-05 2.67862185590871e-07 0.000122963451683948 1.28666521337432e-10 5.98795655841084e-05 2.58890137756717e-10 4.51176987469624e-10 9.89597039292376e-13 0.00599839482686396 0.000232546580026818 0.000305141146433258 0 0 0 0.000612999068118246 4.17445061560287e-10 0.00291389227728021 1.00636323268801e-12 3.21724891289179e-06 6.3203705132549e-13 9.85171391188843e-05 7.08728170194974e-05 0.000598680113154115 NM_001075771.2 PARM1 Bos taurus prostate androgen-regulated mucin-like protein 1 (PARM1), mRNA. 0.0 2444 99.93 0.23907681465821 NM_015393.3 PARM1 Homo sapiens prostate androgen-regulated mucin-like protein 1 (PARM1), mRNA. 0.0 2984 73.32 0.875616631430585 TCONS_00203770_1 sp|Q6UWI2|PARM1_HUMAN PARM1_HUMAN Prostate androgen-regulated mucin-like protein 1; 3e-124 362 71.61 0.996666666666667 0 coding 0 0 0 0 0.00204734620844246 0.98492600313845 -0.0100675345940585 0.910106386000029 GGGGTTTGGCGGCGGCTGTCGCGGCGGCGGAGGCGGCCCCGGGCTCCGGCGGCTGGGATGGAGCAGAAGCGCGCCGGGCGCCGGAGGACGAGCAGCTGACGGAGCCGCGCGGCACTCGCCTCGCTTCCCCTGCCGTCGCCCGGGCCGCCCGGCTCCCGCCGCAGCCAGCGGGCCGAAGAGAAGCTGCCCGCGCTCGGGGGCGCTCGGTCAGTCCCGGCAAACTCTCCCGCCGTCCGCTCCGGGCTCGGCACCGAGTACCAAGGTACCATGGTCTGCAAGACCCTCTTCGCTCTCTGCATCTTCACGGCAGGGCTGAGGCTACAGAGCGTGTCTGCATCCATCCCCTCTACTGATTCTCTTCTGGCAGAGACCACCACACCGACAGCCATCTGGACCAGCTCTCCGCAAAGTCCTCCTGCCTCCCCTACCAGTGGCCCATCCAACAGCTCAGTCCTCCTAGATCCAACACCTGTCCCGACATCTCTACCCACAAAGAACATCTCCACAGAGCCCAGAGAAGAGCAGTCCACCAGCCCTGCCTCCAACTGGGAGGGCACAGACCCTTCACCAACAAGTGGTGGGGTCCACTTAACACCCACGCCTGAGGAACACAGCTCAGACACTCCAGAGGCTGGCGTGCCCACTACAGGATCACAGCCCCCTGCTGAGTCTCCCACACTCACCTCCCCTCAAGGGCCAGCCTCATCGCCCTTACCCCCGTCAACCTCACCACCTGAGGTTCCATCTGCCTCCATCAGCACCAGCCACAGCTCTGCTGAGACCAGCACCGAGCCCACAGGAGCCCCAACCACACCGGAGTCCCACACGGAGGAGCACAGCTCTACTCTCACACCTACTTCACATGCCTCGTCTGAGTCAGTGCCCACAGAGGCCACGCCTCAAGCAACTGTGCCCCCCAAAGTGACCTGTATACTGATAGACATGGAGACCACCACCACCTCCCCTGGGGTGATCATGCAAGAAGTGGAGCATGCGCTAAGTTCAGGCAGCATCGCCGCCATCACGGTGACGGTCATTGCTGTGGTGTTACTGGTGTTTGGAGTTGCAGCGTATCTGAAGATCAGGCATTCCTCCTACGGAAGGCTCTTGGACGACCACGACTACGGGTCCTGGGGAAACTACAACAACCCTCTGTATGATGACTCCTAACAAAAGAATGTGGCCGGGATGAGGAATAACTGTCTTTATTTATCAGTGCTTATCCAGTAGAATTAATAACAAGTACCTGAGGCGCCTTGAGCGACAATCCTGTTTTGTTGGTTTGGTTGTTTTGTTTTCTTCCTCCCTCTCCTCTGGCTGCTACAACTTCTCCTTTCTGGTACCAAAAAAACAAAAAACAATTATTTAAAAGTGAGTGGAGTCTGATATGCAGCGGACATGGGCCAACCCCGAGCCATCCAGGCTGGACGCCACGGTGGTGACGTCTGTACCTAGCGGGGGTCCCACCAAGAGAAGAACCAGGAAGAGGGATGAATCAAGTGTGTCGTCAGGGGTTACTTTTAGGGGAACTTTCTGTGTGTGGTATTTCTTAAACTTTTCTTTATGAAATTACATTAAATCTTGATGAGGGGAAAGGCCATGAGTGCTGGGAGGAGTTCACCCTACAGGTAAGGAAGCAGGGGTTTCTCAGATTCCTTTTTAATCTTGGTTTATCTGGTTGTGTCTGATCGGATACCTGCTTGGCTCTGCAAGCTGGAGGCCAGCTTCTTAGCTGCCGAATTAGGGAGAGAGGAAACAAGAAAGGTGCCCTGGAGGGGACCAGCCAGCCGAGTACTACTACAGAGTAGCAAACTGCTGTCCTATCTCAGCGTGCCAGCGCCCCCGGCCACCCCTCCAGGCCATCTGTATCTGCTAAGGATGCCCGGTTATCTAGCCATCCGCAGCTGGGACCCCAGCCCACAAGCTTTCAGTGGAGTTGCGGTTCCACAGGAGAAGGCTGTGCAATGAGTTTAGTTGTAGGAGAGAAAGGGAGAGGCGTGTGGAGTGAGTGTAGAGTCGGGTGGGGTGAGGGGGGCATGGAGGAGGGTGGGAGGAAAGTTGGGGCAACATGCATTGAATACCTCATTAAGGAAGGTAGGATCAGCCCCCAGTGACCGTCAGAGGCATCCGCTGCATGGAGGAACCTGTAGAATCCTTGCTTTCTACCCACAAAGCAACTGGTTCACTGCCTTACTGTCTGTTGGATAATGGCTATGAACTTTTTTTTTTTAATTTTTTAAAGGCTCTAGTTTTTCTTCAATTAGTCAGTAAGCCTTTTCCATAGGAAATAGACACCGTGATTAATCCATTTATTTTTCCCAAATGCTTACCTTGCTAATTCTGCCATTTAATAAATGAACACCCCTGGGTATACAGTTTTAAAATCCTGTGTCACAAATTTTGAGAAAGAACTGATTGTCTTTGCGGTCATCCATTTCCAGCCGTATTCTCAACAGCAGGTAATTTCATCCCACTGCCCCACTGGGAACATTTGAAAATACCTGGTATAACTTCTGCGTGTCACCCCCTAAGGGGTGCTCCCAGTGGGTAGAGGCCATGGATGTGCTCACCATCCCACAATGTAGAAGATAGCCCACCCCAACTGAGAGTTATCCGGCCGCAAATGTCAATAGTGCCAAGTGTGAGAAACCCTAATTTATTGCAATGCCCATTGTGACAAAACAAGACATTCAGGTTAGTGATAGTTTTTACTTTTAACTAAATGAAATGATTCGTTAAATTTTTATCTGAAAAGTATTTAGTTTGTTGGCGTTGTATTTAAAGTATTTAGTTTGATGAGTTGTTTTTGCGCATGATTGCCTTTTTATTTCTCTGTGTTTTCTAGATAGCCTTATTTCACAGCTCTAACCCTGTCCTCCTGAAACACCCGGTAATAGCAACTGGCATCTTATGTCTGATTTCATGGAGTACAAAATACACATTTAAGTTCTATTTCAAAATGTGTTCTCTTGTCCGACGCTATCGTACAGAACATAAAACTGCATTTTTTATTTCTAAACTCGGACCTGCTGCCATGACTCTGTTTAGTTTCCAGAAACTTGACCTTGGACTCATCCTGTCACTTGCTGTGACCCAACGAAGTCCTGGCATGAAAACGGCCACTGCCGGGCAGTTCTAAACCTCTCTGGTATCAGAAACATTAGAGCTGTGCTACTTTCTGCAGCCTGCCAACCCCCGGCTCTGAAAGAAATCAATCCTAAACTCCTAGGTACCAAAGGAGAGTGAGCAACCCCCAGAAGTATTTTACAACAGGAGGAGGGAATGAGAAGTAGGCTTCCAGGAATTCTCATATCTCTGATTATGAAAATTTTTAAAAAGTGGACTTTCTCAGGAAGGTGGCCAGGAGTGACCAAGCATGCCCCCTTTTAGCAGTGCTTGGCCTGAATAACTGTCCCTCTTTCCTACCCACAGCCTTCCCCCCGTAGGCTTTTGGTTTGGCAAAGGACACTTCAACAAAAACAAAGGACATTCCATATATTTTCTTTTCACTCGGACACAGATACGTTGACAAAATGTCTATGAAGCCCCTTTGGAGAGGTGGTCTTCTGGATGTTGCTTGAGTCAAAAACACTGGGTGAGAGGGACCGGCCTCTTCCCAGGGAATCCTGACCAGTTACAAATCACTGGGTCGGCAAGCAGCTTTCCTCACCAAGGCTGCTGTTGTACAAGAGCCTTTGATACGTTGCTTGCTCTAATGAACTTCTGGATCTTTATGATAAAGAGAGGGCTCTGGGCCTGCAGCACATGCATTCGGCAAGGTGACAGCTTCCCCTAAACACTCGAGAACTCCTTGTTATGTTAGTAGAAAATACCTATGGCTTGAATATTTTGTCAAGTGCATTTTTCTGTTTTTAAGTTGGCCAACAATGTTAATAACTGCATTCAACACACACACACACAAAACATATGCCAATAAGCGACGTCCTTTATCTCAGGGAGCGAGTCTGTTCAAGGTCTACACAAGGGAATTGACTCCAATGGGTCTACAACAACCACACACCATCCAGGCACTGGACTAGTCAGAAAGTGTTAGAGAGAATGTCACTCACACTAGAAGCCCCTTCTAGAATGTAGGTTACAAACGCTGACAGAATGGGCTTCAACCTTGATTTCCTGGGGCCCCGATGAAGGCTCCGGCCCTCCCTGGACGTCTGTGTCTTCATTTCTTAGGCAGGCGTGATGTTGTCCTATGGACCTCACTCCATGCTACCTCACAAATCTGTTGTGAGGATTAATGAAGTTATGTCTACAGTGGTTTTAGTTTCTGGAGAAAAATATTTTATAGACATTTTAAGTATTATGTAGATGTATAAGTGATCTTGGTTTCTTGTTTGGTGTGTTGTTTTACTTAAATGTATTAAATGACACCTGTCTAGTAGCTACAGACAGACAGCTGTTAGAGCTCTGAGCTGTGCCCCAATGCCACTGCCTGACTGCCTGGGACCGCAAAGGGTGGTTTCCATCCCTGAATGAAAGGATGGCCCAGGACGCAGGTCTCACAGACTGTTGAGTTAGGGTAACACGTGTGGATGTCTGAGCGCTAACAGCCGTGGACCTGGCCTTTACCAGCGCAAAGTCTTCTGAGTTCTTTGTGGAGTTGATTTGGGTTTACCATCATCTGTTTGCCCTTTGTCTTGCTTGCAGGGGTGCATGGTTCAATCCTTCGCATCTGGGAAATGAATTTTGCAACTGGGCCAGATGCTAATTTGCACGTTGATTCACCTTCTTTGCCTTTTACCTCTTTTGGCAAATGAATGTACCATTTCAACTTTGATTTTAAAGTGCTAGTTGATATTGGTAATAGTGCTATCCAAGAGACCAATGCCAGATTGCTTTCTTGGGGTAAGCTCACATCGTTTAAAGATGGAAAGACGTGCAACTTCTTTGCTATTTGATGTCATTGTATCTACATTTGTTGTAAGACATATTGCATACTAATGATAATTATATCAATTAAAGTTCTTAAAAGCTTGCATCTGACAGTGGTGATTCACATTTTGATATGTTTTGTTATTCAAGCCATTTGGTTGCTGTGCTTGGTACTGCTCGCATTAAGCAGCCATGGCTCCTTCTTAGAGAAAATTTATCCCACATCAATAAATAATACTTTTTGCAGAGTGGGAAGTTCTCTCTGATCTTGAAACAGAATTGAAGGATATCATAAATGAAGAAACTTTCCAAGCAGTGATTTTACTCCTAACTATACACCATGCCTTATAAAATCATTGTAAAAAGAAACACTTTGATTTGACAAATAGTTATATATAATAAGTTATATTAAGGTGGTAGCAATACATTTGATACTTGCTTTGTTCTCCTTCAAAAACACTCAGCATACCCATCCTATCTGACAGTGAAATAGTAGGCAGTTTTAATCATCCAGAATATTATTTCCACCCCCAGACGCCAACCAAAGACTATTCTAATTCTGAAGAAAAACGGCAATAGCAAAGCCCAGGCATCTTACAACATAAGAAATAAAGGGATACTCTTGCAAACTAGAGCATGTTGATTTGATGATGGATTTAAACTTAAGGTCAGACTTAATATGTTTAGATACCTGCCTTCCAGTGCCACAACATGGAGGATTGATGGGGAGGAGTCAAGATGGACCAGGAGGACAAGACATGAAACAAGCCCTTCCCCACTGATCAT EMBV3_19575 CTTCAAGGACGGGCCCCTCAACATGATTCTGGATCCTGAAGGTGCCGGCCATCAATGTCA Variant GeneID:508158|AHCY:NM_001034315:940_cdna 478^602 1 EMBV3_08058 GeneID:508158 13 GENE AHCY MGC128223 adenosylhomocysteinase EMBV3_28994 TACGTGTTCAAGCTGCATTTCAAGTCCCACGTGTACTACTTCAGGGCCGAAAGCGAATAC Gene GeneID:531927|FARP1:XM_002691965:15_cdna UTR3_Alt 3 NULL GeneID:531927 12 GENE FARP1 NULL FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) EMBV3_37465 TGTGTTTGTCAACATCAGCAGAGGAGAAGTGGTAGACCAGGATGACCTGTACCAGGCCCT Gene GeneID:504764|GRHPR:XM_002689718:25_cdna Constitutive 4 NULL GeneID:504764 8 GENE GRHPR NULL glyoxylate reductase/hydroxypyruvate reductase EMBV3_32264 CTTCGTGCATTTTGTTTTTGACCGGATTTTGGTGGTGTTCGTGTCATTTACCTAGCACCC Gene GeneID:508251|FAT1:XM_002707790:115_cdna Constitutive 0 NULL GeneID:508251 27 GENE FAT1 FAT FAT tumor suppressor homolog 1 (Drosophila) EMBV3_14478 ACCACTTGGCTTCTCATTCCTACTGGAGAACACTGTCTTGGTCTAGATGCCTTTCTGGCC Gene GeneID:786335|GYS1:NM_001101299:463_cdna Constitutive 0 NULL GeneID:786335 18 GENE GYS1 NULL glycogen synthase 1 (muscle) EMBV3_23688 AAGTAACTCCTCAGATAGCTATGGCAGCTCAGATGGCAGCCTTGCAGGCGAAAGCTTTGG Gene GeneID:532701|RSRC2:NM_001102146:225_cdna UTR3_Alt 4 NULL GeneID:532701 17 GENE RSRC2 MGC143309 arginine/serine-rich coiled-coil 2 EMBV3_40634 TTTGAAGGAATCTGTTTCTCAGGTATCATGACAGTGCTGTCGATGATCTTTTCTGCTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14292 GGTCCTTTAGGCCGCTGGGACTTTGACACCCAGGAGGAATATAGCGAGTATATGAACAAC Gene GeneID:100125318|IK:NM_001103349:196_cdna Constitutive 0 NULL GeneID:100125318 7 GENE IK MGC139745 IK cytokine, down-regulator of HLA II EMBV3_07169 AATCTCTTTCTTATACCGCTTCGCTGTACGATTCCCTGCTGCCCGATGTGTATGAGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24910 ATACTCCTTCCAGCTGCCAGAGCAGTACAGAGAGATGAGTATGAAAAGAGAAGGTTATTC Variant GeneID:513523|ORC1L:NM_001014918:49_cdna 213^312 1 EMBV3_32571 GeneID:513523 3 GENE ORC1L NULL origin recognition complex, subunit 1-like (yeast) EMBV3_25109 GATATCCTATTCATCAAAAATACAGTTGGAAGACTTTTTCTACTCAGTAGTTAGCAGGAA Gene GeneID:534898|ANKRD46:NM_001034619:36_cdna Constitutive 3 NULL GeneID:534898 14 GENE ANKRD46 MGC129030 ankyrin repeat domain 46 EMBV3_42589 GTCAGGGACAAGCAGGATTATTTCCTCTAGCTGAAGGTGGTGGTTGTTATTCCCGAGTCC Gene GeneID:616903|LOC616903:XM_002689958:8_cdna Constitutive 0 NULL GeneID:616903 8 GENE LOC616903 NULL similar to cutA divalent cation tolerance homolog EMBV3_11185 AGCTGAGCTCGCTCCGGAACTTGTGATCTCCAACCTTGCCCTGCCCACTTGACTTCCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30150 GCCAGTGAGGCAGAATACCGACAGCAGCAGGGAGAGGAGGCCCGGAGCAGCCAGAGTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43731 TCTGGAAAACCGACGTCAAACATGTTAGGGTCTTACAGTCTGAATGACGGTGCACAGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03407 GCCCGGGCAGTTCGGGCTAATGACATTAACTACCAAGACCAGATCCCCAGAACTCTTGAA Gene GeneID:540252|FEM1B:XM_002690482:415_cdna Constitutive 0 NULL GeneID:540252 10 GENE FEM1B NULL fem-1 homolog b (C. elegans) EMBV3_22838 TGGACTATCAGCTCCGCTACTATGACCAGGCAGAAGATGAATCCCACTCCTTCACCCTGA Gene GeneID:529800|EPHB6:NM_001098067:691_cdna Constitutive 0 NULL GeneID:529800 4 GENE EPHB6 NULL EPH receptor B6 EMBV3_08537 TTTATGGAACGGATATGAGTGTTTAATATCTCAAGGAGTGCTAGAACTGTGCAGAGGCTG Gene GeneID:613812|RNF168:NM_001076289:98_cdna UTR3_Alt 2 NULL GeneID:613812 1 GENE RNF168 NULL ring finger protein 168 EMBV3_06832 GACAAGAGTCGAAGTCAGCGGGAGCAGGAAGAAAAGCTGCTCATCAGTGCCTGGTATAAT Gene GeneID:526516|HOOK2:NM_001024555:44_cdna Constitutive 1 NULL GeneID:526516 7 GENE HOOK2 NULL hook homolog 2 (Drosophila) EMBV3_03790 CTGTAACACAGAATGATCCCAGGAAGAGTCCTGCTTTTGGTCTTTGGGGAGTCGGGAGCA Gene GeneID:528582|CCBL1:NM_001077978:145_cdna Constitutive 2 NULL GeneID:528582 11 GENE CCBL1 MGC139706 cysteine conjugate-beta lyase, cytoplasmic EMBV3_36487 GAAGGCTATGTCCCTAATGCTCGGTGGTTTGATTACCATACAGGCAAAGATATTGGTGTC Gene GeneID:504366|SI:NM_001114189:109_cdna Constitutive 1 NULL GeneID:504366 1 GENE SI NULL sucrase-isomaltase (alpha-glucosidase) EMBV3_14022 CCAGCCTGTAGAGAAAACGTGGCACTGGATCAACAACGCTAAGTTTAACGGCAACATTAC Gene GeneID:615201|CLEC5A:XM_002687007:25_cdna Constitutive 0 NULL GeneID:615201 4 GENE CLEC5A NULL C-type lectin domain family 5, member A EMBV3_41452 CCCTGAAGGGTGCCTTTGGAGGGAAGGTAGGAAGGGAGAAAGTATGACTTAACACCTCAT Gene BVT0102_186429 + 0 NULL GK000007.2:16391412-16415135 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212030 TCONS_00212037 TCONS_00212035 TCONS_00212041 TCONS_00212040 TCONS_00212034 1 XLOC_130070 Coding TCONS_00212040 XLOC_130070 Coding Coding ILF3 7:16373479-16396315 j TSS159201 9228 1 TCONS_00212040_9 564 0.0946033810143043 20 0.596759360630611 2.38093741057455e-85 1.95296069968515e-05 0.000304000621054416 4.58982684996264e-76 8.93287937758492e-83 3.43820072086327e-06 1.16119225265002e-26 4.8326277048291e-48 1.40492600416161e-05 3.25541018456914e-05 0.000387557719265412 2.70637968343381e-05 1.6083973003134e-39 1.20405664037745e-05 9.97617064173181e-07 0.000736262577406914 3.73738321664902e-05 0.000925382276149745 4.55688623193199e-102 1.96103066063159e-102 1.0310987479472e-31 0.000127279471848452 0.000627922164623739 0.000200308614417323 9.90822832219582e-48 1.37130312062204e-104 4.77969610437017e-29 0.000160436848324781 1.3612819992575e-05 0.000227582716379041 XM_005208768.1 ILF3 PREDICTED: Bos taurus interleukin enhancer binding factor 3, 90kDa (ILF3), transcript variant X1, mRNA. 0.0 1.103e+04 99.87 0.664390983961855 XM_005259894.1 ILF3 PREDICTED: Homo sapiens interleukin enhancer binding factor 3, 90kDa (ILF3), transcript variant X1, mRNA. 0.0 4524 89.49 0.370394451668834 TCONS_00212040_9 sp|Q12906|ILF3_HUMAN ILF3_HUMAN Interleukin enhancer-binding factor 3; 0.0 737 94.34 0.99822695035461 2 coding 0 0 0 0 -1.21213692770171 0.0227974894418383 0.0928073341374496 0.170184559300686 GGGGCTTGCCTGCTGTGTTCATCACCCTCCCAGCCTCTGGCTCAGGGCCTGTACAGGGGAGGTGCACAGGGAATACTTCTGACTAAGTGCAGTTTTAAACATCATCCTTCTTTATCAGACTGATGAAGTTGCAGTGTAGATTTGTCCAGGACTGGTGACTGTTTACCATGGGCTTCTCACCAGTCAGCTGTGATTTCCAACAGCCTGCTTCTTGTCGGTTTAGAATTTATTTTCTGAGACTTGGCTTACATTTTAGATTACCTGCCATGGGTGCACTTTTGCAAGAATTCTTCAGTTTGCTATGCACTTAAAAAAAGAACTAGAATGGAAATTTTCAGACACGCACAGTGATCCCCATTCTACCCATCTCCATCTTCAAAAGGTATTAACGTTTTCCAGTGTTGGTTTGTCCTAGGGTTCCCTTCTCCATTCCCCACCTCACCCCTAGTTTTTTTTTTAATATTTATTTTTATTTATTTGACTGAGCCGGGTCTTAGTTGCAGCATGCGAACTCTTAGTTGTGGCATGTGGGATCTAGTTCTCTGACCAGCGATTGAACCCAGACGCCCTTCATTGGGAGTGCAGAGTTTTACCTTCTGGATCACCAGGGAAATCCCTCACTAAAGTATTTTAAAACAAGCAAAAATCAGACGTGTAGTTTAAGCCATAAATTTATCTTTAATGTGTATCTGAGGTAACGACGTTCTTTTCAAACACAGCCATAGTGTCATTCATTCCTTATCCAGGATGTGCTTTTGCATGTGCTTATTATTAGCCCCCACAACAACCTGACGACGTACTTGTAGTAGAAGTCAGTGCTTTTTTTTTTTTTTTTTAGGGTCTGTGGGATTTGTGCTCCATGCTTTCCACAGGCCAACTCATCTAATTTTCACACCCTCCTTGAAGAGCTAGAGGAGTAGATTCCATGTTGCGGGTTGAAGGAACCTCCAAGGAACTTGAAGGCCACACAGATAGTTGAAGTATTGATAACAGCAAGGAAATCTGTCACAATTTGAAAAGATAAGCAAAAATTTGATTTCCAGACACTGCAGATAAAGTGAAGTAAAAATGCGTCCAGTGAGAATTTTTGTGAATGATGATCGCCATGTGATGGCAAAGCACTCTTCCGTTTACCCAACACAAGAGGAGCTGGAGGCAGTCCAGAACATGGTGTCCCACACAGAGCGGGCTCTCAAAGCTGTGTCTGACTGGATCGATGAGCAAGAGAAAGGCAGCAGCGACCATGCCGAGTCTGAGAATGTGGATGTGCCTGCGGAAGACGAGGGCAAAGAAGGGGCTGGGGAGCAGAAGACAGAGCACATGACCAGAACCCTGAGGGGAGTGATGCGTGTTGGCCTCGTGGCAAAGGGCCTACTGCTCAAGGGGGACTTGGACTTGGAGTTGGTGCTGCTGTGTAAGGAGAAGCCCACAACTGCCCTCCTGGACAAGGTGGCTGACAACCTGGCCATCCAGCTCACTGCTGTCACAGATGACAAGTATGAAATACTCCAGTCTGTTGATGACGCTGCGATTGTGATAAAAAACACAAAAGAGCCTCCATTGTCCTTGACCATCCACCTGACCTCCCCTGTTGTCAGAGAAGAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTCTGGACAGGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCCAGAGCCAACGGGCTGAAGTCGTGTGTCATTGTCATCCGGGTCCTGAGGGACCTGTGCACCCGAGTGCCCACCTGGGGTCCCCTCAGAGGATGGCCCCTCGAGCTTCTCTGTGAGAAGTCCATCGGCACAGCCAACAGACCCATGGGTGCTGGCGAGGCCCTGCGGAGGGTGCTGGAGTGCCTGGCTTCGGGCATCGTCATGCCAGATGGTTCTGGCATTTATGACCCTTGTGAAAAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGGGAGATATCACACAGAGTGCGCAGCACGCGCTGCGACTAGCTGCGTTCGGCCAGCTCCATAAAGTACTGGGTATGGACCCTCTGCCATCTAAGATGCCCAAGAAACCAAAGAATGAAAACCCAGTGGACTATACAGTTCAAATACCCCCGAGCACCACCTACGCCATTACGCCCATGAAACGCCCCATGGAGGAAGATGGGGAGGAAAAGTCTCCTAGCAAAAAGAAGAAGAAGATTCAGAAGAAAGAGGAGAAGGCAGAGCCTCCACAAGCAATGAATGCCCTGATGAGACTGAACCAGCTCAAACCAGGGCTGCAGTACAAACTGATTTCCCAGACCGGTCCAGTGCACGCCCCCATTTTTACCATGTCAGTTGAGGTGGACGGGAGCTCCTTCGAGGCCTCTGGGCCCTCCAAAAAGACGGCCAAGCTGCACGTGGCTGTGAAGGTGTTACAGGACATGGGCTTGCCCACGGGTGCTGAAGGCAGAGACTCCAGCAAGGGGGAGGACTCCGCTGAGGAGACAGAGGCAAAGCCTGCCGTGGTGGCCCCTCCACCTGTGGTGGAAACCGTCTCGACGCCCAGTGCTGCCTTCCCCTCTGATCCCACCACCGAGAACGTAAAACAGCAGGGGCCGATCCTGACCAAGCATGGCAAGAACCCTGTTATGGAACTTAACGAGAAGAGGCGTGGCCTCAAGTACGAACTCATCTCAGAGACAGGGGGCAGCCACGACAAACGCTTCGTCATGGAGGTCGAGGTGGACGGCCAGAAGTTTCAGGGTGCTGGCTCAAACAAAAAGGTGGCCAAAGCATATGCCGCCCTGGCTGCACTAGAAAAGCTGTTCCCTGATGCCCCTCTCTCCCTGGAGGCCAACAAGAAGAAGAGAGCCCCTGTGCCTGTGAGAGGTGGCCCAAAATTTGCTGCTAAGCCACATAACCCGGGGTTCGGCATGGGGGGTCCCATGCACAATGAAGTACCCCCACCCCCCAACCTCCGAGGACGGGGAAGAGGAGGGAACATCCGTGGTCGAGGGAGAGGGAGAGGGTTCGGTGGTGCCAACCATGGAGGCTACATGAATGCTGGCGCCGGGTATGGCAGCTACGGGTATGGAGGCAACTCAGCGACTGCCGGCTACAGTCAGTTCTACAGCAACGGAGGGCATTCGGGGAATGCCGGTGGTGGCGGCGGCGGGGGCGGTGGTGGCTCTTCTGGCTACGGTTCCTACTACCAAGGTGACAACTACAACTCCCCAGTGCCCCCAAAACACGCCGGGAAGAAGCAGCCGCACGGGGGCCAACAGAAGCCCTCATATGGCTCAGGCTACCAGCCCCACCAAGGCCAGCAACAGTCCTACAGCCAGAGCCAGTACAGCAACTACGGACCCCCACAGGGCAAGCAGAAAGGCTACAATCACGGACAAGGCAACTACTCCTCGTACTCCAATTCCTACGGCTCCCCTGGAGGTGGAGGCGGATCCGACTACAGCTACGAGAGCAAATTCAACTACAGTGGTAGTGGAGGCCGAAGCGGCGGGAACAGCTACGGCTCAGGCGGATCGTCCTACAACCCAGGGTCACATGGGGGCTATGGAGGTTCTGGGGGCAGCTCCTCATACCAAGGCAAACAAGGAGGCTACTCGTCACAGTCAAACTACAACTCTCCAGGGTCCGGCCAGAATTACAGCGGTCCTCCCAGCTCCTACCAGTCATCACAAGGGGGCTATGGCAGAAACGCAGACCACAGCATGAACTACCAATACAGATAAAGCCCCCGAGGGGTGAAGATTTGTACCTTCTGCACTTAACCCTCCCGTTGTAAGATTCAGTTTTATGCATCACAGTTAACATGTCAACCGGCCTCTCCAGGCCCCTCCGCCCTCCCCTGTCCACGTTGCCGTGTCGTGAGGTGCAGCTGGTCACCCCTGTGACCCGTCCTGTGACCCATATTTAGCCGTGTTTGGGACTCCGTGTCTTCAATGGTTTGTTAGTTGCCATTACAACTTTGTCTGAGTAGAGTTTTTTGAGTTCTTGCAGTTAAGTATCCCTCTGTCTATTTACGATTGGTGTTAGTGTTAACTCAGTTTGTCTTTAAATAGTCACGGAAGGGATACGTCATCTGTTAATGCTTTTGTGAAGTGAGTTAAACGAGCTTTCTGTATTTTAATGCTTTAGTGTTTCAGTTTTATAAGTGAAGATTTTATTTTAAAAACCAGTGGGAAAGAGTGGGGTTTCTTTTTTTTTTTTTTTTTGGTATGTCTGCATCATTCAAGCAGTACATCTGAATTGAGCTGAATGTAGACAAATAAAGAAAAACAAAACTCTGCGCCCGTCGTAGCCCTGGGTGTCTGGCCCACCTGCAGCAGGATGGGCAGGGTGCCTCCACCCTGTTCCCAGCGCAGGAAGGCAGGGTGTGGGGGGCAGGGCAGCTCCTGGTCACCAGAGAAGTCCAGGGCCAGAGACCCAGTGTTGCAGTGGCTCCGAAACCATTCTCCCGACGGCCTGCAGGGCAGCTTCTGGAGGCCCACACTGCTGTTTGGGTTTTGCTCATACATAATTGGGCAGGGTTCATTTTCTGCTCCATGAATTCTAATAGAGTTTTTAAGTGCAATTTCAAATCACCGTGGAGTAAGGTGATCTTGTACTTCAGTACACTAGCTGACTTTGAAGAAGCCCAGCTGAATCTGGCTGAAGGTTCCCAAGGTTTGGGAAATGCAGCCCCAGAACCATCCCTGCAAGTAGGGCACTTGGTGTCTCCAGCAGCCCCCTCCTGGGGCCTGTTCCACTGAGTACACTTTTGGGATGCCTCTCCATCTTGGGCATTTGCACAGTGTTTGGGGGACATTTGTCACCTACGGGTCATCAGTGTGCAGTGGAGGAGCGGCACCCCCCTCCCCAAGCAGCCCTTTTCAACTCCGGTCCTGCCCCAGGGGGAGAGTGGTGTTACCTGCCTATCTGGAAGGAGCCCCTCGGTGAGGCCTGGGACTGCCTCTCTGCAGAAACCTATCTAGTTTTGTCGCCTCTCCACTCTCAGACCACGTACTGTTCAAGTTCTGAGCTCCAGGTGGGACCTTGGCCTCCCGTGCTTGGTTAACCTTGACCGTTGGGAGAAGTGTGAACCATTCTTGATGCAGAGTCACTCAGCCGAGGCAGAAGCCATCCAGTATGCCTTCAGAGGATAAAGATTTGCCTCCTTGGGGAGGTGAAGGAAAGGTGATTGCACTAAATAAAAAAACATCGTAAGAATTTTGTCAACTGCCAGAGCAGAGGCGGCCCTGGATATCAAATGGTCCAGCTTGGGGAATGGGGCCTGAAGTGCCCTGGTATCCCTTCAGTATGTGTGCTAGTGGAGACCGATTCAGGGGCTCCACAAAGAGAGGCCCACACGAGATCCCTGGGATCCTGTATTTGAGATAATAAAGGTGTGGGCAGAAGCCGTGTCACTCAGAAGTCCATGGCGAGGAACACTCCCATACTGCCTGCCACATGACTTTTGCTCTGGACCTGCATTCTCCACACAGCTTTCACCGTGGGTTTCTCAACAGCATCTGCTGCCACCATTCACATTTCTGGATGCTGACACCACAGGGGAAAGCATCTCAAGATCAAAGAAGGCAGCGGAGGAAGATGTCCCTGTGGTGACATGTTCTCAGGGACTTGGGACTTGCTGCCATGGTCCTCTCTTGGGGGAAGGGCCGGGGCCTGGGTGGCTTATCTTTGATGGAGGCCTGACCGAGTCCCTCCCACAGTCAGGACAAATTAACTGGGAAGAAGCAGGATTGCCTTCTTGCTTCCTCCAGCTCCTGGTGGCTCCAGGCATCCCTTGGCTTGTAACAGCATCATGCCAGTCTCCGCCTCTGTCTTCACATGAACTTTTCCTGTGAGTCTTTGTGTAAGGACACCAGTCACTGGATTTTGGCGTACCCTGGTCTAGGATGCATTCTTCCTATGATCCTTTTTAAAAAAAAATCTAAAAAGATGTGTTCCCAGGTAAAGTTAGGTTCACAGGTATCGGTGGTTAGGAATTGGACAGGCCTTTTGGGGGGAACACTTTTTGACCCAGTACAAGGCTGGGTAAAGGTTCTACCGACCATTGCTGCTGTCAGCCCTGGAAGCTCATCAGCCACAATCAGGATTACTGTAGTCAGGTGTGGACAGCACAGAGCCAACAGCATCTTGTCAGCAAAGTGAGTACCTGTCTGAGGAGCCCACTTGGAATCACAGGTCCTTTGTCACCCTGATTCCACTCAAGGACCTTGGTGGCAGTGATGCAGCTGACCATGGACAGTATCCCAGCCCTTGGGACCTACCACCCCAGGAAGCTGGATTCAGCAAGTTGTGGCTATACCTTAGCATGGAGAAGGCCTTGCTGCTCACACCTCAGCTCTTCAGATGTGATCCAGGCTTTCCCAGGCCTGTTGTCCTCTAAGCCTTGGAGGCCAGTGTGGAGGAGGTAGTCTCCAGCTCCTCCTCAGCTATGGCCATGGTAGGCAACAGCTGGCTTATGGAGAGGCACGTTGGCCCATGTATTGCTGGAAGATGGTGTCGTGTTCCTGAGTCGCCAGCAGACAGCACCAGGAGCCTCAGCACGAGGATCGATTGGTGGCCTACACCCTCAGCGAGTTGATCAGGACAGGGTCAACTGGTGGATAGGCCATGGGGGTCAATGGCCTGGGACCAGACATCACCCTGAAGGGTGCTTTTGGAGGGAAGGTAGGAAGGGAGAAAGTATGACTTAACACCTCATGGTGGTAGGAGATGATGTCACAGGGAAGGACAGGGCCTTGCCAGCAATTTGAACTGATCACAGGGTGTAAGTACTGGGGACTAGTGACCTCAGATGAAAGAGGGCCTTTAGTAGCAATGGTGGAGACAAAAATCAGAGACATACACCTCTGTAGATTTGTAGTCACTGGGGCCCTGTTTGTGCCTAGGTGCAGCCTGAGCTGCCCGACTGCCCTCTACCTGACAGGGAAACATTCATTTGTTCTCTCTCTCACCGTTAACCTGTTCTGGTGTAGTCAGCTGGGCTGTCGAGCCTCAGGATTCAGTGTCCAGGTGTGAGCCTCATGGGGCTCTTCCTTCCCTTCACAGGCCTGTTCTAAAACGTGTGGACACAATTTTGGGTAGCAATGCAGCACGCATTTTTGGCTGAAATGCTCATTCTAACCCACTCCAGAATAAATGAAAACTTACTGTGCTCATTTGTTTCATTCACATAATGTGTTTATTGGGTATTGCTTATGTTTCAGCCATGTACTGAGCGCTGGGAATATGGCAGTGAACCTGGTCCTAGCCCTCAAGGAGCTTCCAGGCACCAAGAGTGCCCTTTCCCAGCTCGGGTAGAGTGTTACAGGAAGGCATTCTGTGTCTCAAGTGAGACAGTATGGTTGAGTGGGACCAAAAGGTGTGTTGAGGATTAGCCAAGGGACTGGCATGCTCAGAAAATTCTGGGAGGTGTCAGTGGAATTCAAGGAGCTAATATTCAGGTGAGTGAGCATTGTGGTCATGAGAAGGGAAAAGTGTGGCTTGATGTAAGCCTGGAGCCATCCAGTGCAGGGGCTTGACTGGGAAGCAGAGGACTTTTCAACCTCATCCTGAGGACAACGGAGAGCTGTGGAAAGAGCTAGAAAGAACTTGGGCTGAGTGGTACTCCAGAGCAATTTTTGGGTAAAGAACCTGTGTGTAGTAGAGGTGAAAATAAAGGCTGAGAGACGGACAAAACGGCTTGAGTTCTGCAACAACTGAGCTGAGGTTCAGTGTGATACAGTGGCAAAAGTCCACTGTACTTTGCCAGGGACCACCTTCCTTCCAGACCCAAGAGGGGTTAAAACTGCATGTCCTAAACAGCTGACTGGGACACAGTGATGCATTATAATCTTGGCCCAAGATAAGGAGAGGGGTCCAGGCTTACCACTCTGTTCTACTGTAGGGGGGGACAAGCTGGAATGTTTAGACAGTGGCCATAGAGGTCATTCCACACAGGTCAGAAGTCCTGGTCCATGGCCTTTCTGGTATTTCCCAAAAAGCTAGCATGGCACCCAGGCTGTGGGGGCTGAGACTAGCACACAAGGACTGCTCTCAACCCCGTCTGAATGAATCAGAGAAAACATCGTCCAGGCTTTTGGGACAATTAGCCGACCCCAGGACTGCAAGGACTTTTACTTCAACGTCAGAGGTACCCCTAACTCCTCTCCAGAGCAAACCGAACTCCTGCCGTTCTGCATCTGAGAACTCATATGCTACTCCATAAGGAGAACCCCTTCCAGTTTTGGGGGCTCCTCTGCACAGTTGCGTCGACCCCAAGGAGGGAAGGGTTGGGGATTCACGGAGACTTTGAACCTGGGAAAGTACACCGGCTTCCATTTGGCTGCAGAAACCACCCAAGGATCGGTTTTTCCAAATTACCCTTTTCGAAAATGACCTCTTGCAAGCTCTTAGAACCGCCTCTTGGGCACGCGCTTCAACAGGGCCAATCAACAATCCCCGCTCCGAATAGAGGCTTTCCACAGGCTCTGCCTCTCAGCGTCGTTCGGTACGTCATCGCCCCCACGCTCCCAATTGGACAGTTCCTTAGGCTCCTACCTATTGGGTGAGTCCTTTGTGCGCGGCGCGCGGCTTTTAATAGGCCGCTTCTTCAGGCTCCGCCCCCAGATCTGCAGCTTCCCTGGCCCCGGGAAACGTGCGTGGCGCTGTCCAGAGTGCTGAAGTCGCGCACCCTGCGCCGCCTCAGGATGGCCTTGTGGCGCCCCCCAGGCCTCCCGGCTGAACAGCAATGAAATCTTAAAGCAGATGCCACCGAGCCTCGGATGCAACTTACCTCCAACCCCCGATTTTACCTCTGGGGATAGGAAAAACTCTCTAAACGCTTCGTTAAGAAACCCCCACTCTCCTATCTAGCTCAGAGGAACTCCAAAGTCCCCACTGCTAACCAGAGGCCTTGCACGATCTCATGCTGTGACCTCTCCACCTTTTGCTCCTTCCCTCACTCCTGCAGCTACATTGCTCTCCCTGCCGCACCGCAAGTGATCCAGGTACATTCCCACCTCAGCAGAAAATTTGCTCTCATGGTTCCCACTGCCTAAAATGATCTCTCAGATATCATTTGAGTCCCTCTTTATTTCCTTCAGGCCTTGACTCAAATCTCACCTTATTGAGGCTGATCTAGACCACTCTACTTAAAATAGTCACCTCCCAACTCCTCTCCTGCCCTCATTATTCCCCCAACAC EMBV3_38338 CACGTGGTGGTCTTGGGGATGTTCTGTATAAAATTGTGAAGAGCTGGAGTCGGTGAACGG Gene BVV0102_166989 + 0 NULL GK000025.2:3451042-3492817 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13305 TATGTGGTGCAAGGCGCCATCGAGCTCCTGGACAATCAATACAGCATCAAGGTTCAGGTG Gene GeneID:618779|NSUN4:XM_002686417:372_cdna Constitutive 1 NULL GeneID:618779 3 GENE NSUN4 NULL NOP2/Sun domain family, member 4 EMBV3_23770 ACCACTGGAGTGTAAGCAGCCTGTGGGCAGAAACTCCCATTCCTGTTTTTCTCCCTGTCA Gene GeneID:513331|PHF11:NM_001046144:97_cdna Constitutive 2 NULL GeneID:513331 12 GENE PHF11 MGC137849 PHD finger protein 11 EMBV3_07787 GGACATTGTGCGATCCCTCTACGAAGATCTGGAAGACCACCCCAATGTGCAGAAGGACCT Gene GeneID:540957|VHL:NM_001110019:205_cdna Constitutive 0 NULL GeneID:540957 22 GENE VHL NULL von Hippel-Lindau tumor suppressor EMBV3_13618 ACCTCTGTGGTTGGCTGGTTTTTATTACCTGGCTCATTGGTGTCCTGACATCCCTCCTTC Gene GeneID:539237|LOC539237:XM_002688769:93_cdna Constitutive 0 NULL GeneID:539237 7 GENE LOC539237 NULL similar to Olfactory receptor 7D2 (Olfactory receptor 19-4) (OR19-4) (HTPCRH03) EMBV3_12008 AAGCTGCTGGCCCCGGCTAGGTTCCCGAGTGTCTCTTCATCTCGGTCAAAGTTCTACATT Gene GeneID:282289|NDUFC1:NM_174564:8_cdna Constitutive 0 NULL GeneID:282289 17 GENE NDUFC1 NULL NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa EMBV3_06217 GGCGAGTTCCTCGAGCGGCGTTTCCTAGCCAGCAATAAGCTCCAGATCGTCTTTGATTTT Gene GeneID:531770|FAF1:NM_001046318:79_cdna Constitutive 0 NULL GeneID:531770 3 GENE FAF1 MGC137718 Fas (TNFRSF6) associated factor 1 EMBV3_43046 TGCTCCTAGGGACAGTAATCTTCCTCGTGCCTCACTTTCATCCCTAAGTGGGTATGACTC Gene GeneID:505089|SEC24A:NM_001101849:7_cdna UTR3_Alt 2 NULL GeneID:505089 7 GENE SEC24A MGC143173 SEC24 related gene family, member A (S. cerevisiae) EMBV3_25475 ACGACGTCACAGAACGTGGCTCGGAAGTTGTGGTGGAAGAACGTCAAGATGATTGTCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03907 TACAGGTGGCTCAATGACGTTGTCAAGAATGCAGGCTGTCCTTGTGTCTGGGCTCTGCCA Gene BVV0102_411320 + 0 NULL GK000001.2:130710120-130765735 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002165 1 XLOC_000528 NonCoding TCONS_00002165 XLOC_000528 NonCoding NonCoding - 1:130722293-130723881 - TSS1096 1588 4 TCONS_00002165_3 47 0.458438287153652 1 0 7.71102723133211e-05 3.79662786810967e-05 0.000501160704951615 0 0 5.85664221201144e-05 2.57065307326906e-05 0.000353839778924962 9.44033722429236e-05 2.59790848335682e-06 0 0 1.80685232323775e-06 5.33198478588296e-05 0 0 0 0 4.51570135321076e-06 0 0 0 1.19668769933456e-05 0.000823450312108694 0.000366493301367733 0.000556205533027659 2.61620465436775e-05 0 0 0 XM_002688782.3 ZNF627 PREDICTED: Bos taurus zinc finger protein 627 (ZNF627), mRNA. 3e-73 280 71.50 0.346977329974811 0 noncoding 0 0 0 0 0.0660957625295088 0.620623341279411 0.00875671694446842 0.89543076238641 CTGCTGCCATGTCCTGCCTCCACTGCACACAGTGGGGTGTTGCTGTAAGTCCTTGCTTCAGATCTCTATTGCTAATTCTGGGCTCTTTCTTTGGTCTTGAAGCTGGACAGCTCTTGCAGGCCTCCTGGGTATAGCCTAACACTCTTCAAGAAGCTAGAAGATGTCATAGTCCTAAAATTCTGGGAGTGCTTCCCGTGAACTACAGTAAAGCATGTCTCTGTTAGGACATGCTGGAGAGTTGCTTGCCCACCCAATCTACAGTTCTGCCCTGCGCCCCTCCTAGTTCAGTCTCAAGTTTGTTCTGGGACCCACTCACCTCTAGAGGGAAACTTATTGATTTTGGGGCACCCTAAGTTGCCCAGTCAGGCTGAAACGATTTACATTTCATGACTGGGGAAGGGGACTCTTGCACTCGTCCCCCACCCTCACAAGAAGGCAGAGACTAGCCATTTTGAAGAAAAGCATCTTGGGAGGATGTCCACAGCAAGGATGGCAGAGCCCAGACACAAGGACAGCCTGCATTCTTGACAACGTCATTGAGCCACCTGTAGCCCCTCGCCTGTGTAGCTGAAATTTGGCCTCTGTATCCTGACTCCAAACTGAATCTCAAGGACAGAGTTCTGGATGAAGTAGAAAAGAATAGCTTTATTGCTTTGCCAGGCAAAGGGAGACACTGCAGCCTAATGCCCTTAAAAATGTGTGTCCCAACCTGGAGTGAGGAGTGAGGAGTTTTATAGAAATGGTTTCAAAGAGGGTGTGACCAGTTCATGGACCTTATTCTGATTGGTTGGTGGTGAGATGAGTGGGAGTTAGTATCATCAACCTTCTGGTTCCAACTGTTCTGTGGTCTGCATGCTTATGGGCAGCACAAGTTAACTTTTCCTACCTGACAGGGGTTTCAGTAACTGCAAAACAACTCAAAGATACTGCTGTGTGTATCCTTTGATGGGAAATCAGGACCCTGCCCCAAGGCTGCACTATTTCCTCCTTCGTGTCCCCACATCCCCTCCCTTCCTGATTAACAACCGTTTGAACCTGCCCATTGGAACTCAGGGAAGGTCAAGAAGTCTGAATGAAGCCTACCTGTAAAGAAAGAAACTTTGTGGGGTGAAGGGGTGGAGAGAGGAGCAGAAAGGCTTTCACACCCAGGAGCCCCACGGGGTCCTGCTCAGTTCCACCTGTACCTCTAAAATTGTGAGAAAACAAATAGCCTTATGCTTCAAGCCTATTTGAATTGGAGTTCCTGTGACTTGCTACTCAAACATCTTAACTGCCCGCAGTGATGGTGTCTTTCTCCCACTAGCCACTGAAGCCATCCCAGGTGCTGCTGGAAACTGCCACACTTCTCCACACACACTAGGATGCAAAGCAGTCACACGGTGTTGGGACAGATCAAGGTCACCACCCCCCACCCCCAGGATCAACGGTCACTCTCAGGTCCTGCTCTTACCCTGGCCACCCCTCCTGCCAGCCTGCCTTAGGTCCTAGAATGCCTGCCCCAAATCTCTGCTCCCATTCTGTTCCTGAGTCTTCTCTAGACCTGGATTGAACCCTGGGCTCTGATGCATGAAGGCCCAGACCCTTGCCC TCONS_00002163 s 3' 12175 TCONS_00002163 s 3' 12175 EMBV3_25357 GATCATCAGACTGGTCCATCCAATATAAAGTTCTCCATCCCAGCTTTCCACCTACCGGAA Gene BVT0102_258226 + 1 EMBV3_35367 GK000013.2:51742498-51797273 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11983 TGAACTAGAACTAAGGGAGCAGATGAATCTTAGAAGGTGATGGTGGAAGCCGCAGAGGGG Gene GeneID:616184|LOC616184:XM_002692763:118_cdna UTR3_Alt 1 NULL GeneID:616184 14 GENE LOC616184 NULL similar to AARD protein EMBV3_18332 GACCATCTCTGATTCCACCGCAGGGAAATTGAGTTTATTCCCAGAGTAGACTGTGCAGAC Gene GeneID:100336777|LOC100336777:XM_002694294:381_cdna UTR3_Alt 1 NULL GeneID:100336777 16 GENE LOC100336777 NULL hypothetical protein LOC100336777 EMBV3_19964 ATGCATGACTTTCTGATCAGATATGGGGCTCTTTGGGCATAGATGTATATTACAGAGGAT Gene GeneID:510507|LOC510507:XM_002692665:17_cdna Constitutive 2 NULL GeneID:510507 14 GENE LOC510507 NULL similar to cholesterol 7alpha-hydroxylase EMBV3_42198 ATCCACTTGATAACGTACCTGGGGTCTGCTTATCACTGGGATTAAATACTTGTGACTATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15658 GGATGCGGAACCGACACTTGGAGGTTTGAAGGGGAGAGGGCTTTATGACGACGCAAATTA Gene GeneID:664650|ASCL2:NM_001040607:34_cdna Constitutive 0 NULL GeneID:664650 29 GENE ASCL2 MASH2 achaete-scute complex homolog 2 (Drosophila) EMBV3_09721 GAGCCAGTGACAGTCTTCACTTCCTTCAACCTCACTTTTAGAAAAAGGAGAGCCGAGAGG Gene BVV0102_138512 + 1 EMBV3_40724 GK000001.2:119290652-119308049 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005038 1 XLOC_001164 Coding TCONS_00005038 XLOC_001164 Coding Coding RNF13 1:119160733-119292742 j TSS2496 4265 1 TCONS_00005038_6 353 0.0332942555685815 9 0.967759529725471 1.29736942048176e-05 0.000162010744994406 0.000115312793789847 1.33405633598605e-133 0 1.74362051899123e-06 5.63833041678705e-05 6.83026064940603e-05 0.000119899208948116 6.1416027060791e-05 5.02476440603767e-06 3.46931717687095e-06 9.58430991256628e-06 0.000119719039856047 9.35770333842361e-05 0.000167001463793605 2.5696765768084e-155 0.000414552386824749 0.000243494176790715 1.73617240342099e-05 2.23566008399061e-293 9.71370077869014e-05 0.000361697810670069 0.000352670600507012 0.000228245917088804 9.61714120197159e-05 0.000116843064021022 5.66953327933815e-05 9.67926693612229e-06 0.000139967500930939 XM_005201813.1 RNF13 PREDICTED: Bos taurus ring finger protein 13 (RNF13), transcript 0.0 3528 100.00 0.458382180539273 XM_005247090.1 RNF13 PREDICTED: Homo sapiens ring finger protein 13 (RNF13), transcript 0.0 2430 87.41 0.458147713950762 TCONS_00005038_6 sp|Q0VD51|RNF13_BOVIN RNF13_BOVIN E3 ubiquitin-protein ligase RNF13; 0.0 666 92.89 0.997167138810198 7 coding 0 0 0 0 -0.107858846903298 0.446220683444031 -0.0145779468298428 0.762320731399565 GTGCCACATTAACCCTTCATGCTCTGGAAAACCATAATTAAGATGTTTATCAACCTTACTGTCTAACCTACTTAAACAAATTAGTACATTTTCCCAATCTATTTTCTTCCAGTTTGCCTTCATTCAACACAGTGGGGAGAATAAATGCTTTTGCAGGATGTAGCACAATTCATCTAATTGTAGAATAACACATTACCTTGTTTGTAACTGAAAGAACTATATCTATTGTGATTTGAAGAGCACAATAAAGTCAGATTAAAATGTTCTGTATCCAGTGTCTTTATTTTTAAAAAAGATTTATTTGGCTGCATTAGGCCTAAGCTGTGGCATGTGGGATCTAGTTCCCTGACCAGGGATCAGACCCCAGCCCCCAACAAAGGGAGTGCAGAGTCTTAGCCACTGGATCATCAGGGAAATCCCCCAGTGTGTCTTTATTTAAAGAATGAACAAAGCTATTCTTTTTAACCTGTAAAATGTGGGCATTATTATTTTTTACTTTTCTTTGATGTCATGCAAGGAATCTCTGATTTAATATAAAGCCAGATTGAGATAATTTGATGAAAAAATGCTTACAGGGATATTCTAACTATACTTACACCTATTACACTAGCCTTCATAATACTATTCCCCATTCTGACTTTTCCTTATGACTTTCTTAGAGGCAGGACTGTTTATTAAGTATTGAATGTCTTTACAACTGATGAGAATCTAAGAATATACAGAATGTATAGTCAATGTATACACTGAAGAGGAAAGTACCTTTGATGACCTTTATTTTATTGCAACTTGATTTAGATTTTTTGGATTTAAATTTTGAGTGGGTATTACTCAAAAGGTACAAAAGTTGAAAGGCACAAAAGGATACACAACAGGGAGTCCTCCTATTCCTCAGGTCTCCCCAGAGCAATCCAGGTAACAAGCTGCAGCCAAGGGTATTCTGCAGGTGCTCCAGGGCATAACTCCCTCTCGGCTCTCCTTTTTCTAAAAGTGAGGTTGAAGGAAGTGAAGACTGTCACTGGCTCTTAGAGGCGCCTTATTTTGAAGCAGAAGCAGAGCCAGAATCCCTGGCATTCTAGATCATAACTCTTTGCAATCCTTGCAGTAAGCCCTTGCAGTTACCTCTTTACAGTGTCTAGTTGTTAACTGGCTCATCAGCGTGGATTCAATCCGGATATTCAATCCGGATAATTCAAGTTAAAAGTAGCTTGGTTTAAAACCGGAGTACTTGGGGCAAGGAAGTCTTATCAGAAGGCAACATTTTTGTTGTTGTTGTTGTTGTTCATTAAAGGAAAGAAGGGTTTTAAAAGGCTGATCTAGGGTTTAATCACACGGTTTGACTTTTGTTGAGTCTCGGGGATGGCGCGTGTCAGACCCAAAGCGCAGACGTCAGCACGGTTTCCACTCTGGCATCGGGGAACTAGTGTTCAGCCCAAGGGCTGCTTGCTCCTCTAACAAGGCGACCGGGACTCTAAGGCGCTGGCCTTGGTTCCATCTTTCTAGATCTCGGCCTGGACGTGGTGCAGAAGGGATAAGGCCTCGTCTTCGCCTCCTCCACTGGTCCGGTGAGTGCGGCACAGGAAAGAGTCGCGATGGCTCCAGAGCAGGCCCGCCCAGGGGGGAGCCCGCCAGCTGGGTCTCGGGCTCCTTCGGCCCAAACAGCCCGAACGGACTAGGCCAGCCAGCTCTGGCCGCTCGGTCCGATCCCCTCCTGACCCACGGCCTCCACTCCTGCGGGGACGCGGGAGGATTCCATAGCCAATCCCCTCGGCCATGCTACCCCTTTCCCCGCCAAAAGTAGATCCTTCTGCCTCGCTCCGCAAGCCAGCCCCACCCTGTCCTGCCCTTTCATTCCAGAGAGGAACGGTCACGAGGCCAAGAACGCGACTCCGCGCACTAGGCATCTCTCCGAGCTGGACCCGAGCAAGCAACTAGACTCCGCGAGAGAGTGGGAAGGAGCCTTAGCGGGCAGTTCTATGGCCCAATGGCTTTCCTCTACCTTCGGGTGTGGGCCAATGAGGAGCAAGGGGCGGGACTTCCGCCTCGCCTTCGGTGTTGTCGTACGCGCTCTGACTCTAGGCTGTGGGGGTCGGTGCGGAGATTCAGTCATGAAGTCGGGGTAGAGACTTCTGCAGCGACGCGGCTGGTTGCCTGTTTGTGTTGCAAGGTCAGCTTCCAGGTGATTTTACAGCGAGATGCTGCTCTCCATAGGGATGCTCATGCTGTCGGCCACACAAGTCTATACCATCTTGACTGTCCAGCTCTTTGCATTCTTAAACCTCCTGCCTGTAGAAGCAGACATTTTAGCAGGTTTTTTGATTAACTCAAAACCAGAGAATGCCTGTGAACCCATAGTGCCTCCGCCAGTAAGAGATAATTCATCTGGCACTTTCATCGTGTTAATTAGAAGACTTGATTGTAATTTTGATGAAAAGGTTTTAAATGCACAGAGAGCAGGATACAAAGCAGCCATAGTTCACAATGTTGATTCTGATGACCTCATTAGCATGGGATCCAACGACATTGAGGTACTAAAGAAAATTGACATTCCATCTGTCTTTATTGGTGAATCATCAGCTAATTCCCTGAAAGATGAATTCACATATGAAAAAGGGGGCCACATTATCTTAGTTCCGGAATTTAGCCTTCCTCTGGAATACTACCTAATCCCCTTCCTTATCATAGTGGGCATCTGTCTGATCTTGATAGTCATTTTCATGATCACAAAATTTGTCCAGGATAGGCATAGAGCTAGAAGAAACCGACTTCGTAAAGATCAACTTAAGAAACTCCCTGTACATAAATTCAAAAAAGGAGATGAATATGATGTATGTGCCATTTGTTTGGATGAATATGAAGATGGAGACAAACTCAGAATCCTTCCCTGTTCCCATGCTTATCACTGCAAGTGTGTAGATCCTTGGCTAACTAAGACCAAAAAAACCTGTCCAGTCTGCAAGCAAAAAGTTGTTCCTTCTCAAGGCGATTCAGACTCTGACACAGATAGTAGTCAAGAAGAAAATGAAGTGTCAGAACACACCCCTTTACTCAGACCTTTGGCTTCTGCCAGCACTCAGTCATTTGGGGCTTTGTCGGAATCCCGCTCACATCAGAACATGACAGAATCTTCAGACTATGAGGAAGATGACAATGATACCGACAGCAGTGATGCAGAAAACGAAATCAATGAACACAGTGTTGTGGTCCAACTGCAGCCTAATGGTGAACGGGATTACAACATAGCAAATACTGTTTGACCTTCAGAGGATATTGGGTTATTTCCTTTTAAAATGTTTATTTAGGCATATAGTTTGATTTTTTTTTTTTTTTGCTCCCTTCAGAGATTTCTGTAGAGATAATTTATTTTTTATTCTACAGGTTAATCGAGATTACTGAAACAGGTTGTTTTGATCTGGTATTTATCTGCAGGAGTGTACTTCATTTCACTAATAATAGACTGGTGCTGTAACTCAAGCATCAAATCGACTCTTTTGGAATGAAACGTAGCCAAACATCAAGAGATTCCTCAGTATAGCTTGCAATTAAGACCTAGATCACAGTATGCACACGTTTCATGTTTTTACACACAGGGTCAGTGCTGTGGCCACCGAGCATGAGCTGAGCCAACTCCCATCTCCATAAAGTTACCTAGAGTTGTTGAGCTGGAATATGCTTGTTCTGGTATTTGTCCAAATTGCCATAATTAGCAAGAGGCGACTATCAGCACCACAGAGAAAATCAAAGCTTTTTCCTTTCTATTGCCAAGTAGTCTTACCCTGATAGGAACAGTCAGTACTAGGGCAGTTTGCAAAATGTTTTTATTTTTAAGGCTTTTAATACTATAGTGTCATGTATGAACTTCATTTATCAGCTGAAGTAATGTCTCTGACTTTACTTACTGAATTTCAGTATCCTTAAGGATTCTGTGTGGTGATCAAAACATAAACAAAATGCTGTATAAAAATACCAAACTTCAGTAATTGTTAATACTCAGATTATATACCTCTTAATAAAGAGCATCCTATGCTTATTAGCCCTGCTAAACTGTGTACAGAGGAAACTGTTCAAGTATTGGATTTGAAAATGTTGCTTATGTTTAACAGAACTAATGATGTATTTAAACAATGTATTATGAAAAGCTAAATTACACATTGTTAACTATGTAGAAAATATAGGCTTATATATATATAATCAAAATGCTAAGAATTTTTATATGGCCTTGTATGAAGGGAGTTTGAATGTTAATAAACACGTTTTCCACTTTGTTT EMBV3_00484 GAACAACCGCAGGTCGAATTGTTCGTGAAGGCGGACTGAGACGGTACAGAAGCTGTGCCC Variant GeneID:515646|CLIC1:NM_001015608:132_cdna 213^322 2 EMBV3_15528 GeneID:515646 23 GENE CLIC1 NULL chloride intracellular channel 1 EMBV3_01723 ACATGGATGGGACCGCCCTCTATGAGGCTTTGGCTGCCATTTTCATTGCTCAAGTTAACA Gene GeneID:282354|SLC1A3:NM_174600:12_cdna UTR3_Alt 2 NULL GeneID:282354 20 GENE SLC1A3 MGC140731 solute carrier family 1 (glial high affinity glutamate transporter), member 3 EMBV3_25200 GCCCTGGCTCTAATTTCCAGTACTGTAATGAATAGAAGTAGTGAAGTGAATACTCTTGTC Gene BVT0102_122630 + 1 EMBV3_17774 GK000027.2:22395556-22499289 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17259 TCGAGCTGGAGCGTCCCCTTCAAAAGTTCAGATACAGAGGCAGAACACACGGGATCATCT Gene BVV0102_276110 + 1 EMBV3_06863 GK000009.2:96232091-96258010 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236380 TCONS_00236386 TCONS_00236385 TCONS_00236389 TCONS_00236383 TCONS_00236381 TCONS_00236379 TCONS_00236387 TCONS_00236384 TCONS_00236388 TCONS_00236382 1 XLOC_144449 Coding TCONS_00236382 XLOC_144449 Coding Coding TULP4 9:96212106-96382571 j TSS176960 3584 1 TCONS_00236382_7 498 10 0.979033696264314 0.000366505231529365 0.000240926694201653 0.000101846646880286 0.000724045078051224 6.26869900835326e-86 0.000213615186070116 0.000196717296303817 5.27144268516781e-05 0.000206131607908978 5.89729969316306e-05 4.93414557774522e-38 0 5.63667046143531e-05 0.000411518327199591 0.00037801585273184 1.58867477076117e-06 1.91973482786872e-34 2.75240782381908e-52 3.17516173303123e-05 0.000816158406898764 2.15191456240455e-147 0.000102487902199759 6.47179083416699e-155 0.000358596953144868 2.00108373816424e-95 1.09744362856028e-143 3.91905478668201e-74 5.16049315077824e-05 5.68937224056659e-05 6.92053188223525e-05 XM_002690367.3 TULP4 PREDICTED: Bos taurus tubby like protein 4 (TULP4), mRNA. 0.0 6221 99.97 0.962890625 XM_005267057.1 TULP4 PREDICTED: Homo sapiens tubby like protein 4 (TULP4), transcript 0.0 3456 82.59 0.960658482142857 TCONS_00236382_7 sp|Q9JIL5|TULP4_MOUSE TULP4_MOUSE Tubby-related protein 4; 0.0 988 96.36 0.991967871485944 2 coding 0 0 1 1 -0.035625153849362 0.794682181001815 -0.0469818719137106 0.425534972018371 GGGGAGAGTTCTGAAGAGGCAGGACCACACATGGCAATGTGTTCTGTGGAGTAGATTTGTCAGACTCCAGGGCCTTCAAGCTGTGATTAATCTGATGGTTCGTGAAACAACTGGGAAAACAGATGTTTTGTGTGCCATTTGAAGAGTGTGTGTCTATGTATATTTAAAACTTTCTTTCTATACATACACATTTACACGAGAAGACAGGCTCATTCTTGTGCTCTCTTGAAGAGTTTTACAACTGATGAAAATTAATTTAAGAATCAGATGGAGCAACTTGACACCACTGGGCTTGGGAGCCCGGGGAGAGAAATACATCACTAATGGCCAGTTTTCCATATGGTCTTCACGGGTAAAGAAAGTTTGCAAAAAGAAGAGAAAAAAAAGCTTGCACAGATCAAGCCTCAAAAATACCTCTCCAGTTTAAAGAAGGAACTAAGTGAGAAGGTGACTGAGGGGGAAGTGTGATTTCAAGCTTTGCAGGTGGAAGTGTGCCGTGCTTTTTGCGCTTTATTTTTCAGTGGGTCTGGTGATTTGGACAGACGTTAAGATTCAGGACTGAAGGGTGGCTCTCACTGTGTGCTTATGACTGGAGGAGGCCAGCCAGGGTGTGATGGGGCAAGTTTGAACAATGAACTGATTCCTTTGCCTTTTTTCAGTTAACTGAAAAAAGTCCAGAAATTTTAATTTATTATTTCCCTTTTTCTTGCCTGTATCTGTAGGATAGTTCCTTAAGGTAGCAATTGAAACTGCTAATCACAAAATAATTATCAAGGCGCATCCTTGTAAAGCTTTTTTCCTTGGACTGTACCCGGGGCATTTGGAGACGGTCTCTGAAGGTGGTCAGGAGAGTGCCCTTCAGACAGCACAGTCACTCTTCAGGGAGATAGTGAGAAAAGAACCTGACTCTTGCCTGTGTTTCCATTTTAAGGGGTTCTCTCCCGTGTTGAGTCCAGGCATACTTGCATGTAAAAGGGGGACCAGTTCATGGACTTAATTCTGGGATTAGTTTTTTCCCTTCAAGATGGAAAAGCACGTCATCCTTAAGAGCAGAAAGGGGAGGAGTGACTAGGGGAGGGAGTACGGAGACCTCCTGTAGCCCAGCTGGGCTACCCTTTGTCCACACACGTGTTTAGATTCACTGGAGGCCCACGCTCCCGTAGAGCCCTGGAACCTCCTGGCTCTGCTGGGGGCAGGGGCTTCCTCGCCTGCCTCTATGGCCCCCAGGGCTGCGTCAGCCTGTGTCACGGCCCTCCCTGGGGACACAGCCACCTTCTGGGAAGCCCGGTTGGGCTCTGAAGTTGGAGGTTTCTGGCTCTGAACAGCGAGGAAAGAGTTTTTTTTTTCCTCCTAAAATTTGGACTGCTGTCTGCACAAACTCTAGTCTGTTTTGCACGGTTTGTGTGCCTTTTTCCCTTTATGCAATCTTCAGCTTTAGCAGCAGAAATTTGTCTAGCTGAGAAAGCAAGCCCGAGGGTGGCTTCAGAAAGAAGATGATCCCGTGTGTTCTGCCTCTGTATCTGAACTTTTGAAGGGGACGCTCCAGCTCGAGGGATTCTTTAAGCCTTAAGTTACTTGAAATCTATGTATTTGCAGCCCTTTGTGTCTGGAATCACATTACACTAAACTGGAATCTCAGGCTGAATAAGAAGAACCAAGTGAAAAGAACACTCAGTTTCTTTATCACCACTTGTCAACGATGCTCTTTCTCCAAAGGGTCACCCGGCGCTTCCTCTAAGGACTTGAAAATAAAAATGGCCGCCACGTTTTTTTTTAAGCATTATCTTTTCTTAGCAGACTGCCATCATCTTTTATAGAGGAATTTTTCACTATGCATTTGGTGGAGCTTTCTAAAATACTGACCTTCTAATTAGAATGAGGTCAGTTTCAATTAAAGGGGTCAGGCTAAACAGCGCAAGCCAACCACAGAATTAACACCAGTCAGTGAGAGCAATTGGTTTAAATTTTTCGGCATTTAGCCTTGCTCTTTAAGTAAAACGGTTCTTCCAAAAAAAGTATGTATGCAGCGGTGGAGCATGGGCCTGTCCTGTGCAGCGACTCCAACATCCTCTGCCTGTCCTGGAAGGGCCGTGTCCCCAAGAGTGAGAAGGAGAAGCCCGTGTGCCGCAGGCGCTACTACGAGGAGGGCTGGCTGGCCACGGGCAATGGGCGCGGCGTAGTTGGGGTGACCTTCACCTCCAGCCACTGTCGCCGGGACAGAAACACTCCACAGAGAATCAACTTCAACCTGCGAGGCCACAATAGTGAGGTTGTGCTGGTGAGGTGGAACGAGCCGTACCAGAAGCTGGCCACATGCGACGCGGATGGCGGGATATTCGTATGGATCCAGTACGAGGGCCGGTGGTCTGTGGAGCTGGTCAATGACCGAGGTGCCCAGGTGAGCGATTTCACGTGGAGCCACGATGGGACGCAAGCACTGATCTCATATCGAGATGGGTTTGTCCTGGTTGGTTCTGTCAGTGGACAAAGACACTGGTCATCTGAGATCAACTTGGAAAGTCAGATCACCTGTGGCATATGGACACCTGACGACCAGCAGGTACTGTTCGGCACCGCCGACGGACAGGTGATCGTCATGGACTGCCATGGCCGGATGCTGGCCCACGTCCTGCTGCACGAGTCGGATGGCATCCTCAGCATGTCCTGGAACTACCCCGCCTTCCTGGTGGAGGACAGCAGCGAGAGCGACACCGACTCGGACGACTACTCCCCGCCCCAAGATGGTCCGGCAGCGTACCCCATCCCGGTGCAGAACATCAAGCCCCTGCTCACTGTCAGCTTCACCTCCGGAGATATCAGCCTGATGAACAGCTATGACGACTTGTCTCCCACCATCATCCAGTCAGGGCTGAAAGAGGTGGTGGCCCAGTGGTGCACGCAGGGAGACCTCCTGGCAGTTGCTGGTATGGAGCGCCCAAGCCAGTTCAGTGACCTCCCCAATGGCCCTCTTCTGAAGAGTGCCATGGTCAAGTTCTACAACGTTCGTGGGGAGCACATCTTTACCCTGGACACGCTTGTGCAACGCCCCATCGTGTCCATCTGCTGGGGACACCGGGACTCACGGCTGCTGATGGCTTCGGGACCGGCCCTGTACGTGGTGCGCGTGGAGCACCGGGTGTCCAGCCTGCAGCTGCTGTGCCAGCAGGCCATCGCCAGCGCCCTGCGCGAGGACAAGGACGTCAACAAGCTGACCCTGCCCCCCCGCCTTTGCTCCTACCTCTCCACTGCCTTCATTCCCACCATCAAGCCCCCAATTCCAGACCCCAACAACATGCGGGACTTCGTCAGTTACCCGTCGGCTGGCAGCGAGCGGCTGCACTGCACCATGAAGCGCACAGAGGACGACCCGGAGGTGGGCGGCCCGTGCTACACACTCTACCTGGAGCACCTGGGCGGGCTGGTCCCCATCCTCAAGGGCCGGCGCGTCAGCAAGCTTCGGCCCGAGTTCGTCATCATGGACCCGCGGACCGACAGCCGAGCAGCTGCTTGTTAGCTGACTGCCGAGAGTAGTGTCCCAGTCATCCATGGAGATCTCGCATGATGGGCCAGCCCGTCCTTCCAGG EMBV3_31689 TCAGGCTCATGTGCATCTCAGCTTCTTAAATGAAGGGCTTCAGAGAGCTTCCAGGTGCTG Gene BVV0102_450622 - 1 EMBV3_31996 GK000018.2:35929503-35957654 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083003 1 XLOC_051160 NonCoding TCONS_00083003 XLOC_051160 NonCoding NonCoding - 18:35949240-35949810 - TSS62491 308 1 TCONS_00083003_1 36 0.516233766233766 2 0.462214411247803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000171503892726395 0 0 0 0 0 0 5.95717413282748e-05 0.00179621103481638 0 0 0 0 0 1.95202823114318e-05 XM_005223810.1 SLC17A4 PREDICTED: Bos taurus solute carrier family 17, member 4 (SLC17A4), 2e-10 69.8 73.68 0.418831168831169 0 noncoding 0 0 0 0 -0.0847400606392063 0.429523662373778 0.032048215344431 0.590335442837629 CAGAATGAGTGAAGACTGAACACGAGTCTCACAGCTGAGAAGGCCAAAGCCTGAGGAAGGTGGCTTGGAGACAAGTGGCGAGTGAAAAGCAGAGACAGGAAGCCAGCTGCAGCAACAGAGAGTCTCAGGCTCATGTGCATCTCAGCTTCTTAAATGAAGGGCTTCAGAGAGCTTCCAGGTGCTGGGCAGGTGATGTGCCCACAGAGGACATGGAAGCTCTGTGCCCCTTCCCCATACTTTGCTCCTTGGATCTCTTCTGTTTGACAGTTCCCAACTTGGAACCTTTATAATAAACCAATAATAGTAAG TCONS_00083002 s 3' 10290 TCONS_00083002 s 3' 10290 EMBV3_02442 TCAGTCTGCTGCTTGTTTTTGCTCTGCTGAATGCCTCCCTTTTTGCACTTTGTGACACGC Gene GeneID:515042|LOC515042:NM_001105370:170_cdna Constitutive 0 NULL GeneID:515042 2 GENE LOC515042 MGC140457 similar to leucine-rich-domain inter-acting protein 1; LeR inter-acting protein 1; LEAP1 EMBV3_37269 CTTTGGTACAGCTTCTTAAAGGGTTGAAAGTTGTGATCATAACCAAGGGGACTGAGGTTC Gene GeneID:541012|TCP11L2:NM_001105431:19_cdna Constitutive 2 NULL GeneID:541012 5 GENE TCP11L2 NULL t-complex 11 (mouse)-like 2 EMBV3_39693 AGCAGCTACACTCAGGTAAATGGCCACGTTGAGGACTTCGCTACTACAACTACATCTACT Gene GeneID:784771|LOC784771:XM_002707882:7_cdna Constitutive 0 NULL GeneID:784771 17 GENE LOC784771 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_35808 AGTTGGAGAAAGAAGTGGAATATTTTACAGGTACAAAGACGGCCAGGACCACATTGGCGA Variant GeneID:511380|ALKBH2:NM_001024516:129_cdna 494^692 1 EMBV3_24958 GeneID:511380 17 GENE ALKBH2 MGC142387 MGC90512 alkB, alkylation repair homolog 2 (E. coli) EMBV3_29763 AGAATCTCATGGAAGCTATTCGGGGAAGCAGCATAAAACAGCTAAGGCGGGTGGAAGTTC Gene GeneID:521024|LMOD2:NM_001105387:34_cdna Constitutive 0 NULL GeneID:521024 4 GENE LMOD2 MGC179338 leiomodin 2 (cardiac) EMBV3_01347 GTACCTTGGGCCTCCCATTCCAGTGAAATTGTAATATCAAGGGTTTCAAAATCTGACTAG Gene GeneID:282416|COL10A1:NM_174634:10_cdna Constitutive 0 NULL GeneID:282416 9 GENE COL10A1 NULL collagen, type X, alpha 1 EMBV3_20999 AGGAGTCCAGTGAGCAGCAGTTGGATGCTAAGTCCAAGGTCACCAGCCAGCTCATAGATT Gene GeneID:781142|LOC781142:XM_002694350:104_cdna Constitutive 0 NULL GeneID:781142 17 GENE LOC781142 NULL similar to MGC137215 protein EMBV3_30680 GGAGTAAGGATGATGAGATAAGGGAAAGCCGGTTCAGCTTCACAGCTTATGGAATGGGGC Gene GeneID:541160|GLRA3:XM_002689452:41_cdna Constitutive 0 NULL GeneID:541160 8 GENE GLRA3 NULL glycine receptor, alpha 3 EMBV3_02592 AATGTGCTCACCCCTCCCTAGACACCTCCATTAACCACAGACTATGTAGCGCTGGCACTA Gene GeneID:507111|CHD8:XM_002690649:183_cdna Constitutive 0 NULL GeneID:507111 10 GENE CHD8 NULL chromodomain helicase DNA binding protein 8 EMBV3_43523 GAAATTACAAGTGAAGACCACATTATCCAGGAATGGCAAGGAATTTACTCTGTCAGGAAG Variant GeneID:506787|PDE8A:XM_002696586:24_cdna 736^873 3 EMBV3_02726 GeneID:506787 21 GENE PDE8A NULL phosphodiesterase 8A EMBV3_19602 TGCTCCCAGTGAAAACTACATGAGGCTGAAGAGGATGCAAATAGAGGGGGCTTCCAAACC Gene GeneID:511494|LOC511494:NM_001100339:119_cdna Constitutive 0 NULL GeneID:511494 3 GENE LOC511494 NULL similar to RAP30 EMBV3_00405 GACCAAAGGTCCACTCCCACCTGTTTACTGTCATTGGCAATGCTGAAAGTCATCTAGAAA Gene GeneID:517750|LRRC10:NM_001075757:34_cdna Constitutive 1 NULL GeneID:517750 5 GENE LRRC10 NULL leucine rich repeat containing 10 EMBV3_35151 CTCATAGATCTCAGAAATAATCATTGCTGGGAATCCTTTTAAATTTCTGGGGACTGTCTT Gene GeneID:514033|PDCL3:NM_001075645:62_cdna Constitutive 0 NULL GeneID:514033 11 GENE PDCL3 MGC140046 phosducin-like 3 EMBV3_28022 GTACAAAAGAAGGACCCTAAGGAATGGGCAGCTCAGTACCGAGAGGCAATGGAAGCAGAT Gene GeneID:514372|MAGED2:NM_001075665:32_cdna Constitutive 0 NULL GeneID:514372 X GENE MAGED2 MGC139951 melanoma antigen family D, 2 EMBV3_37538 CGTTAGTGGATGGCTATTTCCGAAGTTACGAACGACAGCGCCTTTCCCGCCCTGGTCCTC Gene GeneID:100337060|LOC100337060:XM_002698474:518_cdna Constitutive 0 NULL GeneID:100337060 26 GENE LOC100337060 NULL hypothetical protein LOC100337060 EMBV3_27529 CAGTTTGGGAGAAGGTCAAGCCTTTGTCATCATCAGAGAGTTCACACTGGAGAAAAGCCT Gene GeneID:790276|LOC790276:XM_002695499:274_cdna Constitutive 0 NULL GeneID:790276 18 GENE LOC790276 NULL similar to Zinc finger protein 418 EMBV3_26998 TTTTTTCACCATCGAAGGCAGCTAACATTATCCAGTGCTGCTGGTGGGGGCCAGGAGTGA Gene BVV0102_362089 + 0 NULL GK000004.2:88649790-88657781 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39448 CGGAAGGGTCCTGTTCATAAAGGACGTCATTGGGGACGAAATCTGCTGCTGGTCCTTCTA Gene GeneID:540881|KCTD10:NM_001101216:252_cdna UTR3_Alt 2 NULL GeneID:540881 17 GENE KCTD10 NULL potassium channel tetramerisation domain containing 10 EMBV3_14723 CGAGAAGGTGCCTCCACCCCAGCTATGGAGCATGCCTCTTGTATTCCCAAAGTCTCAACA Gene GeneID:534048|CDK18:NM_001083473:82_cdna Constitutive 0 NULL GeneID:534048 16 GENE CDK18 MGC155091 PCTK3 cyclin-dependent kinase 18 EMBV3_34294 ACGTCTCGGTCTATGGCAGCGTCTACGCCATTGCCGACATCTCCTATTGCGTGGCCTATG Gene GeneID:785833|SLC18A3:XM_002698970:124_cdna Constitutive 0 NULL GeneID:785833 28 GENE SLC18A3 NULL solute carrier family 18 (vesicular acetylcholine), member 3 EMBV3_30700 GGGTGTATTAAGGAGGACCTGTGGATACAATATAATGTGTACCTTAGAACACAGAATGTC Gene GeneID:538706|COMMD10:NM_001083489:14_cdna Constitutive 2 NULL GeneID:538706 7 GENE COMMD10 MGC137858 COMM domain containing 10 EMBV3_10831 TGTTGGGTGGTGTTATTCTGCAGTGCTTTGAGTCTTCCACGTGAGCTCGTGCTGCTGTGA Gene GeneID:512354|WDR47:XM_002686156:291_cdna Constitutive 1 NULL GeneID:512354 3 GENE WDR47 NULL WD repeat domain 47 EMBV3_40159 AGTACAATGATGAAGGCGAGGTGGTGCCCCGGGTAGTGACTCCGGAGATTCGGAAGACGA Variant GeneID:538671|SUPT6H:XM_002695748:449_cdna 74^212 1 EMBV3_31607 GeneID:538671 19 GENE SUPT6H NULL suppressor of Ty 6 homolog (S. cerevisiae) EMBV3_21387 AGCTCAGTCCGCTTCATCTGTGGCACCCAGGCACTGCTGACTTCGGAGGACGCAGTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09126 TCCAGGGCTCTGTCGAGGGGGATCCGGCCCCCACCGCCATACTAAACTATTCAGGAATAA Gene GeneID:540451|EMILIN1:XM_002691456:295_cdna Constitutive 0 NULL GeneID:540451 11 GENE EMILIN1 NULL elastin microfibril interfacer 1 EMBV3_38254 ACAACCTGCAAGAAGTCCGGCGTTGGCTGGAGAAGAATTTCAGCAAGAGATGAAAGCTAG Gene GeneID:494548|DIO2:NM_001010992:85_cdna Constitutive 0 NULL GeneID:494548 10 GENE DIO2 NULL deiodinase, iodothyronine, type II EMBV3_03395 TGAAATATCAAACCGAGCTCTGATCAACGTCTGGATCCCGTCAGTGTTTCTCCGGGGCAA Gene GeneID:518366|SNX29:NM_001076862:195_cdna Constitutive 0 NULL GeneID:518366 25 GENE SNX29 NULL sorting nexin 29 EMBV3_24132 AATGGTCAAACAGGTTGCTCTTCAGACTTTCGGAAACCAGACTACGATCATCCCAGCGGG Gene GeneID:532797|IMPAD1:NM_001046335:38_cdna UTR3_Alt 2 NULL GeneID:532797 14 GENE IMPAD1 MGC129108 inositol monophosphatase domain containing 1 EMBV3_33529 AGATGGTGGAGGGTTACACTTATTTATGAAGTGGACTTAGCAGTTTTAAGCAGAACCATG Variant GeneID:541175|DUSP10:NM_001034725:98_cdna 88^941 3 EMBV3_38165 GeneID:541175 16 GENE DUSP10 NULL dual specificity phosphatase 10 EMBV3_00906 TGATGCCTTTCCCCTTGTTGGAACCCTTCAACTTCCCCACGATGGAATTCACAGAAAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33782 ACCTTGCACTAGATAAGGGAGAACTAGCACTAGCTGAAGTGGCAAGAAGGAGAGCTAGCG Gene GeneID:527992|LOC527992:XM_002691425:424_cdna Constitutive 1 NULL GeneID:527992 11 GENE LOC527992 NULL similar to CG17657 CG17657-PA EMBV3_21966 GAGGCTGCTTCTGGGAGAATTTCATCGATCTGGGCCTGCAATGTGCCAACTTCTTTGCTT Gene GeneID:532119|BDKRB1:NM_001109999:262_cdna Constitutive 0 NULL GeneID:532119 21 GENE BDKRB1 NULL bradykinin receptor B1 EMBV3_40473 AGACCTGGCCTACGGGAGGAGCAGCTGGGATGACTACGAGTTTAACATTGATGAAGTGGA Gene GeneID:507245|ECSIT:NM_001034286:8_cdna Constitutive 0 NULL GeneID:507245 7 GENE ECSIT MGC128961 ECSIT homolog (Drosophila) EMBV3_30571 CACACATCAACTGCTAAACCCAACATAACCTTCGAACCCAGACATCCTGAGACCACCTAG Gene GeneID:100139242|LOC100139242:XM_002694352:109_cdna Constitutive 0 NULL GeneID:100139242 17 GENE LOC100139242 NULL similar to Protein BOP-1 EMBV3_20143 GCCGGTCTGCCACGTCGTCCAACTCACATCTGGAGCCGCAGTTAGGAAATGAGACACCAA Gene BVT0102_276696 + 0 NULL GK000020.2:62428552-62630505 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115214 TCONS_00115217 TCONS_00115215 TCONS_00115216 1 XLOC_069476 NonCoding TCONS_00115216 XLOC_069476 NonCoding NonCoding - 20:62615406-62630277 - TSS85751 992 1 TCONS_00115216_1 39 0.141129032258065 3 0.933490248823134 0 3.16912508406574e-11 9.76286152673453e-09 0 0 0 4.28914963496167e-12 0.000124385447982737 8.38571321616687e-12 0 0 0 8.53987422124247e-13 3.12723453844995e-12 0 7.20489017851404e-11 0.00159487695726726 3.97558198260932e-11 0.000133982048827171 0.00011390201003143 0 0 0 0 1.00287475797268e-14 0 0 0 4.23033425944021e-12 6.4739721438857e-09 XM_005198114.1 LOC514257 PREDICTED: Bos taurus uncharacterized LOC514257 (LOC514257), mRNA. 1e-12 78.8 92.73 0.0544354838709677 NR_034170.1 EIF3J-AS1 Homo sapiens EIF3J antisense RNA 1 (head to head) (EIF3J-AS1), 1e-06 59.0 86.00 0.0493951612903226 0 noncoding 0 0 0 0 0.0173131757991566 0.879747379665316 -0.0381772711735291 0.546635115765751 GGAGGGCTGGGCGTCGGTAGACGCTGGCTATGCTGGCGAGGCAGGAGCGGGAGACTGGGTGAGCGTAGTCCAGCGGGAGGGTGTCACCCACGTGGGCGGTGGTCCGCCAACCCGCCAGAAGGACTGTGACCGTGGTGGGGAAGCTGAGCCTCCAGAGCTGGGCCCCCAGGCTGGTGGTGCGTGTCGTCGTCGGGGAACCCGCCGGTCTGCCACGTCGTCCAACTCACATCTGGAGCCGCAGTTAGGAAATGAGACACCAACGGGGACCGACCAGGGGCCCAGAAGCCTCGACTCAGCTTTCCATGTGAAATCAGTCTGAGGAGGAGAACCTGTGAATGGCTGAGGTTTGAGTCTCAGCCTTCTCACACACGAAATGTGCAACATCAGAGAAACAACTCGCTGTGCGCCTCAGCGCCCTCACCTAAAGAAAGAGAAACCAACTCTGAATATTTACTGGAATCTTGTAGAATACTGGAAGAATTCGTGGAATTAAGGAGAGGGCTCCTGTAACTTCAGGAAGAAACGTGGACCAATACCTGAGCTTCTCTCTCTACAACACCATCAGAGGATAACTCCAGGCAAATGTTCATCTTTGTGTCTACTTGGCTAGGCCACAGCACCTAGGCATTCGGTCAAATAGCACTGTAAATGTTTCTCTGAAGACATGTAAAGAATGAGATTACCATTTAAATCAGTAGACTTTGAGTAAAGCAGCTTACCCTCCAACCAGTTGAAGGTCTTAATGGGGGGGAAAAAAAAAGACCTCCCATAGGTAGTGTACTAGTCAGGGTTCTCCTGTTACCTGCTGCTTACTCATTGGGGAATGTAATCTTTAACCCCATTCCTTGTATAACACCAAGTCAGAAATACGTGTAAGAGAATTGCATCGAGCCCTAAACCCACACCTAGTGAGGAATAGTGCTAGTGCATAAATCACGCCTACTGTTAGGAACTCAAGCTGCAAAAGCTCCCTGGCTTTGTATCAATTTAGC TCONS_00114102 r 5' 14502 TCONS_00114102 r 5' 196 EMBV3_06562 TTGATTACGACTTTCTCAATGACTGGGGACCGAGGTTCAAGATGCTGGCCGAGCTGTATG Gene GeneID:414735|CDH5:NM_001001601:90_cdna Constitutive 0 NULL GeneID:414735 18 GENE CDH5 NULL cadherin 5, type 2 (vascular endothelium) EMBV3_20402 AATCGTACTACTCGTATCTTTAGTTATGTCTGGTCGTGGAAAGCAGGGAGGCAAGGCCCG Gene GeneID:513666|HIST2H2AC:NM_001081720:100_cdna Constitutive 0 NULL GeneID:513666 3 GENE HIST2H2AC NULL histone cluster 2, H2ac EMBV3_00902 GAAGGAAGAAGGAAGGCTGAGACTCCGCCCAGAGACAGATCTGGACTCTGCCCCCAGCTT Gene GeneID:538660|EPN3:NM_001046434:153_cdna Constitutive 0 NULL GeneID:538660 19 GENE EPN3 MGC137304 epsin 3 EMBV3_31295 AAGGCAAAATTCAAAGGAAAAGGTCATGAGACCTGTTTAAAACGAATTCGACTTGATCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12789 GAAAATTCAGAAGATCGACGAGCCAGGGTGTCAAGGTGATTCTGGACAGTTACTTCTTCT Variant GeneID:513343|TMPRSS4:NM_001101973:65_cdna 237^384 1 EMBV3_12809 GeneID:513343 15 GENE TMPRSS4 MGC159370 transmembrane protease, serine 4 EMBV3_29325 CCAAGAGATGCCGAGCGGAGGAGCCGATTCTGTGATTCCTGAGTGAAGCTGTTTTCAGAT Gene GeneID:508949|MARCH2:NM_001037589:42_cdna Constitutive 0 NULL GeneID:508949 7 GENE MARCH2 MGC133913 membrane-associated ring finger (C3HC4) 2 EMBV3_41307 AGATTCCAAAGTTAATGTTCACATCAGTCAGGGACTTGTGCCTTTTGCCGCCACAGACCC Gene BVT0101_029528 + 0 NULL GK000030.2:32986907-33352227 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250128 1 XLOC_153071 NonCoding TCONS_00250128 XLOC_153071 NonCoding NonCoding - X:33203879-33205180 - TSS187349 1301 2 TCONS_00250128_2 77 0.156033820138355 1 0 0 0.000108130756861085 0.000284520169753918 3.19144440537995e-05 3.79491160849004e-06 0 4.48248531285167e-05 0 0.000206199239802946 0 0 0 0 0 0 0 0 0 2.20474181341248e-05 0 0 0 0 0 0.00019704349960224 4.33234472109869e-05 1.80143403423079e-05 0 0 0 XM_005192244.1 B3GALT5 PREDICTED: Bos taurus UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 (B3GALT5), transcript 9e-54 215 83.66 0.154496541122214 0 noncoding 0 0 0 0 0.0465691650625249 0.752864554338463 -0.00313954131583964 0.94630804717303 GTCCTTTGCCCATATGCTAGGATGCAAACCCCAGACGTAGCAAGAGTGAAATGGGTTTTTTGTTTACTGCAAACAAATTTGAAAATAAATTGAAAATGGTTCTTCCAAACCATTTCACAGTGGCTGGGATGCTGGTGCTTTGTTTTTTCCCTTCACCAATAACAGCACAGAGGTCTCCTCCTTGGTGAGAATTTGATCTCCATTCAGAGGAGCATCAGCCCCAGTAATGGCTTAGCTCTCACTTTCCTGTGTCTCGTGTTTTGGGTGCTTCTCACTCTGGGAGGCAAGCTCATGAGAAACTGTCCTCAGCCTCTTGGGGGTGGGGCTGGGCTGGCTCAGTCCTGCCCACTGCTGACCAATTCCAGCCATTTGGTCCAGCACTGTATGCATGTGGCCCCTCCAACAAGCTTTCAAACCAGACCAGTGAGTGTAACTTCAAGGTGGCAAAGGGAGGGCTCTGGAAGGAGGACTGATGGGGCATCTTGGGTGCCATCCCAGCTGTGGTTTGTCTTCACATCTAGCTAAGATGCCATGACCTGGCAACATCTTCAGACCACAAACATCCACTTGGGCACATTCCTGGGGTGGACCCAGGTCCCAGCAGGGTCTGTGGCGGCAAAAGGCACAAGTCCCTGACTGATGTGAACATTAACTTTGGAATCTTCTCCAGAGCCAGGGAGCTCTGGCTGAAGGCAAGTCTGGGCAAGAAGCAGCTGTGACCAAGATGGACAGGGATCTATCTCCCAGGTACAGATTGCAGCACAAGACTGAGAGAGACATGCTCATTTTCCCGATATCTAGTACTCTTTGCTAGTTAACCTTGACGTTGACCAGGGACTTCCCAGGTGGTGCTAGTGGTAAAGAACCCACGTGCCAATGCATGAGATGCAAGAGACACAGGTTTAATTCCTGAGTGGGAAAGATACCCTGGAAGAGGACATGGCAACCCACTCCAATATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCAGGCTACAGTCCATGGGGCGGTACACAGTTGGACAAGACTGAGCGCACATGCATTCACATTGACTAGAGTCTGAGCTTTGAGCACAGCCAGATGGAATCTTCTTGTCTTCAGAGTACCATAGTGGGTTCTCATCTCAGGAGCTCCTTTGATGACTCATTTTCAATGCAGGTGCTTCTACTTTCCAGCAGGCTCCATCACAGTCTGGCCGTTTTTCTAACAAGCCACCAAGTACCCCTGCCCAGAGCCACACACAGGCAGGATATAACTCCCTAACACTGGGCCTATTTGAATGACCTCTGGGTAG TCONS_00244084 . 5' 147048 TCONS_00244084 . 5' 147048 EMBV3_09392 CAGGCTATGTGGTAACTGTGGGGGCTGTAACCCTACCTGCCCCTTAACAACCATGTCTTA Gene BVV0102_196781 + 0 NULL GK000005.2:38388077-38397356 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191623 1 XLOC_116976 Coding TCONS_00191623 XLOC_116976 Coding Coding PRICKLE1 5:38273722-38392963 j TSS143564 5000 1 TCONS_00191623_4 697 0.0142 9 0.958143240523314 7.65447026794678e-05 5.42695296609971e-05 0.000348298551423943 0.000890089193612987 0.000640099018006481 1.66220826445201e-169 5.55537031077577e-05 5.93625597710456e-05 0.00113021565576866 2.05625326116649e-05 2.16100712374433e-06 8.07804767920371e-05 4.93124982748867e-05 4.43570508349907e-06 1.30861512130105e-05 0.000350353721621284 0 4.4415696745828e-36 0.000335222367033674 0.000304497653884702 4.25284616069062e-05 0 7.17698141255769e-05 3.66309329865364e-05 0.000207790790676412 0.000217256836391045 8.46473388237847e-05 4.07630760542651e-199 3.11149939971341e-05 7.81624456654859e-06 NM_001102534.1 PRICKLE1 Bos taurus prickle homolog 1 (Drosophila) (PRICKLE1), mRNA. 0.0 5653 99.87 0.629 NM_153026.2 PRICKLE1 Homo sapiens prickle homolog 1 (Drosophila) (PRICKLE1), transcript 0.0 3658 86.69 0.6134 TCONS_00191623_4 sp|Q96MT3|PRIC1_HUMAN PRIC1_HUMAN Prickle-like protein 1; 0.0 1339 96.41 0.997130559540889 2 coding 0 0 0 0 -0.042572440915652 0.782027097436724 0.0164328585768724 0.790725149480103 AGCCCAGCCTGTGGGATTACACGAGATAGGATCGAGTACAATCGGGTCCCCAGCGAGGCGAGGCGCGCCGGAAGGAATCGAACAGCCACGGTCTGGTGTCCTGTGACTGAGAAGCCAGCTGTTGACTCTGTTATGATGCCTTTGGAGATGGAGCCCAAAATGAGCAAACTTGCCTTTGGATGCCAGCGGAGCTCCACATCGGATGATGACTCGGGCTGCGCACTGGAGGAGTACGCCTGGGTACCCCCAGGCCTCAGACCCGAGCAGATCCAGCTCTATTTTGCTTGCTTACCAGAGGAAAAGGTTCCTTATGTTAACAGCCCTGGAGAGAAGCACCGAATTAAACAGCTTTTGTACCAGTTGCCACCACATGATAATGAGGTGCGGTACTGCCAGACTTTGAGTGAGGAGGAGAAAAAAGAACTTCAAGTGTTCAGTGCTCAGCGGAAGAAAGAAGCACTAGGAAGAGGAACAATTAAACTTCTGTCCAGAGCAGTAATGCACGCCGTGTGCGAGCAGTGTGGGTTGAAGATAAACGGAGGTGAGATTGCAGTGTTTGCCTCTCGAGCGGGCCCGGGAGTGTGCTGGCACCCATCCTGCTTTGTCTGCTTCACGTGCAGTGAGCTGCTGGTCGACCTCATCTATTTTTATCAGGATGGAAAAATTCACTGTGGCCGGCACCATGCTGAGCTGCTCAAACCCCGGTGCTCAGCATGTGACGAGATAATTTTTGCTGATGAGTGCACAGAGGCTGAGGGTCGGCATTGGCACATGAAACACTTCTGCTGCCTGGAGTGCGAGACGGTCCTGGGCGGGCAGAGGTACATCATGAAGGACGGCCGCCCATTCTGCTGCGGCTGCTTCGAGTCCCTGTATGCAGAGTACTGCGAGACATGCGGGGAGCATATTGGTGTGGACCACGCACAGATGACCTATGATGGGCAGCACTGGCATGCCACGGAGGCCTGCTTTTCCTGTGCCCAGTGCAAAACCTCTCTGTTGGGATGCCCCTTCCTCCCCAAACAAGGCCAGATTTATTGCTCGAAGACATGCAGCCTCGGTGAAGACGTGCATGCCTCCGATTCCTCTGACTCTGCATTCCAGTCAGCTCGATCAAGAGACTCCAGAAGAAGTGTGCGGATGGGCAAGAGCAGCCGGTCAGCAGATCAGTGTCGTCAGTCCCTCCTTTTGTCCCCTGCTCTGAACTATAAGTTTCCTGGCCTGTCAGGCAATGCTGACGACACCCTCTCTCGGAAGCTGGACGATCTGAGCCTTTCCAGGCAAGGAGCAAATTTTGTCAGTGAAGAATTTTGGAAAGGCAGAGTAGAGCACGAAACCCCCGAAGACCCTGAAGAATGGGCCGAGCATGAAGATTATATGACACAGCTCCTCCTCAAGTTTGGTGATAAAAGTCTCTTTCAGCAGCAGCCCAGTGAGATGGACATTCGAGCCAGTGAGCACTGGATAGCTGATAACATGGTTAAAAATAAGACTGAGTTGAAGCAAAACAACCAGAGCCTTGCAAGTAAAAAATACCAATCTGATATGTATTGGGCACAGTCACAAGATGGACTAGGAGATTCAGCTTATGGCAGCCACCCGGGCCCTGCGAGCAGTCGAAGACTCCAGGAATTGGATCTGGACCATGGGGCTTCAGGATACAATCACGATCAAACACAGTGGTATGAAGATTCCCTGGAGTGCTTGTCAGACCTCAAACCAGAGCAAAGTGTTCGGGATTCTATGGATTCTTTGGCTTTGTCTAATATCACAGGGGCTTCAGTGGATGGAGAAAGCAAGCCGAGGCCATCGTTGTATTCTCTGCAAAACTTTGAGGAAATAGAGACAGAAGATTGTGAGAAAATGAGCAATATGGGGACTCTGAACTCTTCCATGCTGCACAGGAGCACGGAGTCCTTGAAGAGTCTCAGTTCAGAGCTGTGTCCAGAAAAAGTCCTGCCCGAGGAGAAGCCGGTTCACCTGCCAGTGCTCCGAAGGTCCAAGTCTCAGTCCAGGCCACAGCAGGTCAAGTTTTCAGATGATGTCATCGACAACGGAAGCTATGAGAACATCGAAATCCGGCAGCCGCCCATGAGTGAGCGAACTCGGAGACGGGTGTACCATTTTGAAGAGAGGGGACCCAGGTCACACTACCATCGCCGCAGGAGAAGTAGGAAGTCCCGCTCAGACAATGCCCTGAACCTTGTCACAGAAAGAAAATACTAATACCAAGGACAGGCTGCGGCTCTACACCCCCGATAACTACGAAAAGTTTATCCAGAATAAGAGTGCCCGGGAGATCCAGGCCTACATCCAGAATGCTGACCTCTATGGGCAGTACACCCACGCCACTTCTGACTACGCCCTGCAGAACCCGGGGGGACCGCGATTTCTAGGCCTCTATGGGGAGGACGACGACTCCTGGTGCTCCTCCTCCACCTCCTCCTCCTCTGACTCGGAAGAAGAAGGGTATTTTCTTGGACAACCAATTCCTCAGCCCCGGCCGCAGAGATACGCCTACTACACAGACGACCTTTCTAGTCCAACTTCTGCACTCCCCACTCCTCAGTTTGGTCAGAGGACAACTAAATCCAAGAAGAAAAAGGGACACAAGGGCAAAAACTGTATTATTTCTTAATGTAGTAGCTGCGGAGATTGTATTTAAACTTAGCCATTAACCATCTTAAATCATATCTTTTTTCTTCCATAGGAAAGTTGCTAAAATAGATTCAAGTGCTTTGCCCATGTAAGTGAGACCCCGACTGCTGTTTACAGTGTCAGATTCACCTTTGGAAGGTGTGATTTCTCCACTTACCCTCCTTGGATGGTGCCAGGTAGACATGACCTTTTGTGTCTGTTGGGTGCATCACAATTTGATACAGCTGCTTTGGTCTCCAAACCTCAAGAGATCCGTAAGAAGCTGTTGAGAGGTGATTGGATGGGGTGTTGATTTTTAGACGGTGGAGAACTTGAGCCACCTTTGTCAAGCAATAGTGTTTGTCATTTGTCTGCACCAGGTTGACCCAGGTCCTGACGGTCTGTCCAGTTGTGTGGCATGCACGTAGTCATGTGACCCAGCCAACACTGTGCATCCCCTTGTGCAAGGCCACCTCCTCCCCTTCCAGCCCTTATTAGCCAGGTCAACAAACTAAAAGCACCTGATGTTGGAAAAAGTGATTACTAGGCTAATATAAAGCTGCCACGAAGTTGATGATGGAGAGATGCAAAGCACACTGGACTCTAGAATTCAGGGGATGTGGGTTAGGAGACTCCCCTCTCTCATTATCTCAGGCGGGTTGAGTGCTGTGGCCAAGTTTCCATTTCTGTAAAATGAGAGGTGCTCAACCATCTCAAAGGCTTCCTTCCAGCGTTGGTATTCTGTGAAGACCAAACTGAATTTATTGGGTCAGCCAGCAGGCAAGTCACCCCACTCAGCATAAAGTGTCATTTCCCTTTTTGACTCTTCATTTACCAACATACTTGGCAAAGATTGCTGACAGGATGGTCCTTCAGAGACCATGGCTCATGAGAGTTGGTAGCTTTAAAGACGGTTGGTGCTTATCTACATTTTAATGCTTGCGACTCTGAGTGGGCATGAAGTTTGGCAGTGCTTACCTCCCTCTAGGTGCATATGCTGCAAGTTGGCTTTTTCCTTTAAGTAGGCAATCTGAAATGGCATACAGAATATGGAAAACAAGACATTTTCCTCCCTTGTGTTTTATTTTTCCCCCAATTACCAAGATAAAAGATTTTTTTTTCTACAGTGCAGTTAGTAGCAGTCTGGAATCTCTGAACATGTTGTAAGCAAAGCTGAAAAAGTGTTAACTTTGTTTAATTAATGTTGGCTCCCAGTATAGGAGAGCTGAATTACCAGGTTTATTCCACTTAAATGACACTTCTCAAATCACTATGGGTCCAGGTACCACACCGAAGAGCTGAGTTCCAGGCTATGTGGTAACTGTGGGGGCTGTAACCCTACCTGCCCCTTAACAACCATGTCTTATGAACCTGTAAGATGTTTTCTAAATTAACTCCAAAGCAGAAGTCATAGAAACCAACATAGATGGTAGTAGTGACTGAGTATAGGTGAAAATCTACTGAGCAAGGATTTTATCAGAAGTTTTTTGTAAGTTATTTTTATATATAACAAACATATTATAAACATCACAAACATATTACACCATAAGTGTACATACCAACAGCTAGCGTGTCCTGGAGTCAGCATTGGAACCTAGTTCTGAATGACCACTGAACTTCCACTTCTTTCAAGAACACCAAGTTTAAAAGTTGAAAGATATGGGTAAAACACTGACTCTGCCCCTTCCAGCTATATGACCTTAGGCAAGCCCTTAATTGTAAAGTGAGAGAAAAATACTCATTGGCTTACAACATGTGAAAGTGTTGTTTGTGAATCTAAAAACACTAGAATGGGCCTTCTAATGTGGTTCAGATAGTGAAATAAATGAAAAACAGTGCTTCTCTGAATCCTAAATTTAATATATTAAACCTGGAATGTACTTTAAGCTACATCTGATGTTACCCTTGATTCTACTCTACAGAAGTAACGGAATACAAAGTTTTTAAAATGTGAAATTCCTACAAGGTGGGGACCAATTCCACGCCCCTACCCACACTTGCAGGGCGTCACCCCTTCACTCAACATTCGCACCTCAGGATGGGGGCAAGCCCTGTAGGCTTTGTAGAGGTCAAGCTGCCCCAGGGAATGAGATGTTGAAAAAAACGGTGCCTCTTCTTGGCCCCTGGGGTGTTGGAAAGGAAAGGTGACTTTCACACATGACTCCCCTCTCTTAGTTGAGGAAGCCCTGCAGTGTTGAGGAGCCACACCCCATCCCCACCCTCTGTGGTGGTGGAAGGCCACCCTGGTTGAGCCCACATCACAGCTGAGGTTCAGTCCTGGCCAGTAAAGGAAAGGGAAATTGAACACTTGACCACAAAACATGCCTTGGCCTGCTGAGCTGTGGTTCAGCTGGACTGTCGCC EMBV3_38907 GGGGTCTGTTTTGTGCTTTTTTACCTTGTGTAGAGATCTTATTACAAAGTGATTTTCTAC Gene GeneID:617336|SHISA2:NM_001101265:82_cdna Constitutive 1 NULL GeneID:617336 12 GENE SHISA2 TMEM46 shisa homolog 2 (Xenopus laevis) EMBV3_12117 CAAATTACATTTTTAGAGACTGGGGTAGGGGAACAGGCACGGGGAAAACTACGAGCACCC Gene BVT0101_017792 + 0 NULL GK000019.2:62514777-62549977 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098139 TCONS_00098135 TCONS_00098137 TCONS_00098138 TCONS_00098140 TCONS_00098136 1 XLOC_058432 Coding TCONS_00098139 XLOC_058432 Coding Coding GNA13 19:62545108-62577327 j TSS72552 6326 1 TCONS_00098139_1 282 0.0354094214353462 4 0.80377428766528 0.00164178295340708 0.00762529053404168 0.00612516419591539 0.00517872057449756 0.00504355623379046 0.000979423910892364 0.00166240814371338 0.00295004075500421 0.00252648477750231 0.00182512953443961 0.000779566220072063 3.89503257821718e-05 0.00119612790606289 0.00203659316359191 0.00192268374942462 0.0121048579869754 0.00334949743846325 0.0030471226047742 0.00664050290886939 0.00546393373035469 1.39291681328764e-06 0.00312858312608426 0.00285528986702419 0.00105836960769248 0.00522603687891484 0.00616029879280266 0.000336287257887369 0.00110885657482038 0.000418046327410013 0.000319632199507788 XM_002696232.2 GNA13 PREDICTED: Bos taurus guanine nucleotide binding protein (G protein), alpha 13 (GNA13), mRNA. 0.0 1.049e+04 100.00 0.919064179576352 XM_005256956.1 GNA13 PREDICTED: Homo sapiens guanine nucleotide binding protein (G protein), alpha 13 (GNA13), transcript variant X1, mRNA. 0.0 1083 84.08 0.155706607650964 TCONS_00098139_1 sp|Q14344|GNA13_HUMAN GNA13_HUMAN Guanine nucleotide-binding protein subunit alpha-13; 0.0 566 96.10 0.99645390070922 2 coding 0 0 0 0 -0.153904320657712 0.628067674869182 0.0218929527968828 0.654061562767113 AGATACAGAGCCTGGTTCTTCAGGTGCCTGAGGGTGCTCTCTGGCATCTGGGTAGCAGTTTATCTAGGGGTATGAGGGTGCTGGTAGATGCCCGAGAGAAACTCCACATTCCTTGGGGGGATAACTCAAACCAGCTCAATGGAGACAAGCTGATGGCATTTGATACCCGGACGCCCCTGACCGCCCAGGGAATCGTGGAAACGCAAGTTTTCTTACAGTACCTTCCTGCTATAAGAGCATTATGGGCAGACAGTGGCATACAGAATGCCTACGACCGGCGTCGAGAGTTTCAGCTGGGTGAATCTGTAAAGTATTTCCTGGATAACTTGGATAAACTCGGAGAACCAGAGTACATTCCGTCCCAGCAAGACATCCTGCTCGCCAGGAGGCCCACCAAGGGCATCCACGAGTACGACTTTGAAATCAAGAACGTGCCTTTCAAGATGGTCGACGTGGGCGGCCAGCGGTCTGAGCGGAAGCGCTGGTTCGAGTGCTTCGACAGCGTGACGTCCATACTGTTCCTCGTCTCCTCCAGCGAGTTCGACCAGGTGCTCATGGAGGACCGCCTGACCAACCGCCTGACCGAGTCGCTGAACATTTTTGAAACCATCGTCAATAACCGGGTTTTCAGCAATGTCTCCATAATTCTGTTCTTGAACAAGACAGATTTGCTTGAGGAGAAAGTGCAAATTGTGAGCATCAAAGACTATTTCTTAGAGTTTGAAGGGGACCCCCACTGCTTAAGAGACGTCCAGAAATTCCTGGTGGAGTGCTTCCGCAGCAAGCGCCGGGACCAGCAGCAGAAGCCCCTATACCACCACTTCACCACCGCCATCAACACGGAGAACATCCGCCTGGTGTTCCGCGACGTCAAGGACACCATCCTGCACGACAACCTCAAGCAGCTGATGCTCCAGTGACGCCCACAGGGCCTGCCGCCTCCCGCCTTCCTGTGTTCTGTTTGTTTTATTTTTAAAATAGAAGTTTACAGCAGGAATTAGAACAGTCTTGATTCTGGGTTTAACTCCTTGGAAATCTCAGTCCTCCTCCTGCGACTCCAGCCCCTGGCGGAGGGCCGCCCATGACCGACGCCCACGGGCTCAGCTCCGGCCTCCCTGGATGGGCCCTCCTCCCGCCAGGCCTCAGATGCGCTGTCCTCCTGGCTTTGACCCTTCCACTTCTCAAACAGTGCTCCTGTGGTGCCAAGCGTGGCAGGTGCCCTGAGCGCCGCAGGGCGGGGCGGAGTGCGCGCAGGCCCTGGACCGCGCGGGGCACCTCGGTCGCCGCACGCGGTAGCCGCGCCTGTGGCCAGCCTCGGTGGACTGTTGGAGAAGGAGGGCCGTCGGGGGAAGTTTGCTCTGAGGGGTGGCCGTCCGTAGAATTCCCCGGCTTTGGCCTTCACATTCTTCTGATTGCTCGTGTCCCCAGCAGCTGTTCTGAGTTTCTGTGGCTCCTGAAGGCAGTGCTCGGCAAGTGTCTTAGTTCACGTACGGTGTCTCATCTGGCGCTGGTGGACGCTCCCGTGTGGTTCCGTGTGCACAGGTGCAGGCCGTTCCCAGGGTTTTGATCAGAAGCCAAAAGAGTGGAGTGCAGGCTGCCTTTCCCATACTTAGATATGTCATCCAGGTGCCATGCAGGAAACCCTGGCCATAGTAGCAGCTAGAATGTGCAACCTCGTAACAGAACTTTCTCAATAAACACAGCCCTTCCCAAGGATGTTTTGTTTTACTCTCAAGACTTTGAGACCCCGTCTCAGACGCAGTAGGGCCCACAGTGGGAATCCCTGTCGCACCATCATGGACGTGGTTCTTTCACGCTCCTGCCTGTTCTGTCGGCTCCAGATGGCAGCATTTATGGGGGTTTTTGGGTTTTTCAGAGCTTGCCAAGGGCAACGTTTTTCTGTCAGACTATCCGGAAAGCCATTGTTTGAGGTTCTCGTTCCTTCTCGGTGTGTCTCTAAGAGGCTGTACGTGTTGGCAGCACTGTTGTTCGTGGGATTCCAGCTCTCCTGAGGTGCATTTCCAAGGATTCTCCCAAGAATGAGGAGTCGTGTTCCAGTTCCTGCTGAAAGATGGTTACATGTGACCTCCCCCACCACGCCCCAAATTAAGGCGCACCCCCCAAGGAGCTTTGCCATTAACAGATGCATCCTCTGTGAGCGCCTCAGAATGGCTGGTTTTCGGCATTGAGAGGCCCGCCCTGTAGGTTACGTGTGGTGTGGCAGTCGGGTAGAGGAACAGTGTACAAGGTGACAGTTCAGAGAGTCTGATGGTTTTCCTCCCTTTCCTGAAAATTGTGATTGACTGTGATACCTGCCCCTTCACTGTACAGCTGACTGTTCTCAGGTATTTTATAGGCAAGCAGTCCTTGAACAACTGGTCGGAATTCTGGATCCCCCAGCCTGCCCCGGTCGGGCTCTGGGTCTGTGTCGTGGTCGGCTTAGGATAGGACTCTGCCAGGTCCTGACCAGGGTTTGACAGGCACCTGACTTTGCTCGCACTTGAAGCTTCTCCATCGTTCCCCCCACAGCTGCCCGTGTGTCCGTGTCCTGGTGATCCTCTGCTGCTGACGTGAGCCCCGCCCTGTGACAGGCGTCCGTGGAGGGGGGCTCGCGCGTGTCTGAGAGTTCTGTGTCCAGTGCTTCTCACCAAACACAAGTGTGTTGTTTAACCCGCAGAGTGAACCATTTCAGGGCATAGCGCGTGCACGCTGCACAGAGACGTTGGTGGAGGTCTGTGCATCGGTTTAGCAGGAGTGGTGGTTCACTCACTCCAGTGAGGGCTAAAGTCAGTTCCCGGTGTGTGCAGTGAGGAGGGATGGTCTCAATCAGGTCCTCGTTCAGATCTCTGATATGAGCCACAAACACTGCCCGACAAAGCAGAAGTCCCCATTGTGACCACCACAGTCAAATGTTAAAGCGCCAAAGAGATGGGACACTATTCTGAGCAGTTGAGATTCCTTTCCCGATGTGTGTGAAGTCTCAGAGTCAACTTGCTTTTCAAGTAAAACCTCGAGTACATTTTGAGGTAGTAAATTACTCATACAGACTTGCCGGTTCAATCTGAAGGCTTTAGTTCACGTGTTTTATATACTGTATATTTAAACCATGTGAAAGAGTCCTATACCTATATCATGAAAACCAGATCCTTTTAAAATACCACTGTGTGAAGGGGAGGTGGAAATTAGGGACAGAACTGCAAGGGTGCTCGTAGTTTTCCCCGTGCCTGTTCCCCTACCCCAGTCTCTAAAAATGTAATTTGAATTTAAAATTCTTCAGTGTATTTAATTTTCTAAGTCTTCATGGTTACAATTTGGAGTAAAATGTGCCTAATTCTCCATTACATTCTGTTCTTGGGTCTGAATGTCTTCTTGTTTAATTCTTAAGAAATGTCACACAAGTGTCTTCATTGACCTTGAAGAACCTTACAGTATACAGAGTTGCCTTATAAAGCAAAGAACACCTCAAATTTTTGCCTTTTTTTTTTCTTAAATAGGGAAGCGTTGTCAGATATTTTTCTGAAGATCCAAATAATTTAAAGGCATGCCTCTACCACTTAAATATTATTTTTAACAACCCACATCATTGCTTGCTGCCAAGTGCTGTATTAAACTGGAATCTTTAGTTGTGTTGTCTAGAATGGGCACTTGATAGCTGGGGCACAAGAGCAACCAAAGAAGGCGTCACGGAAGCCGCACCGCGTGTCTGTCACACGGCAAAGGTCCTGGTTAGGCTTTGGTGAGGTTGCCGAGGGGAGTCCTTGTTCAGTGGTTGGTATAAAGCAGGAAGAAGTCGGATTCCCCCAACCCCAGGAGTGATTAGAAGTGTTGATTTACATATACAGAAATCATGGGTTCCATAATTGTTTGTAAGCAGAAATGAGTACATCTTAACTTCCAGCATCTGCCCAAATACTTGGATTTATGCTTTTGGTAGGATGTTATTTTCAGCATTAGTACATACATCCGGTTATGCCTTATTTATATGAAGAATAAAGTTACCAAGTCATGTTCTGCAATGTTCTGAAATTCAAATCACTGTGTGAGAAACCCTCAAATTGGTGCTTTCATTATATAATGAGACATTGCGGCAAAGCCCCAAACCAAGCCATCTGAAACAAGATTTTCTCCATTGCAGTCTGTAGAAGTGTTACTTCTGTGTGTATTGAGAAGGCTGCGTATCAGTGTTAACTCTCCATTTCCTGTTTGAACCCATGAAATCATGCCTGTAAATCTCAGTCACACATTTGTAATAATCTCCCTAATAAACCTAGAGAAAGCCACTCTGTTACCTTTTCATTTCTTTTAATGAAAGAAAGTTTTAATTGAGGGATCAAGAGCACAGATTCTGCATATCTTTTTTTTTTTTTTCCAGTTGAAAATCTGACTTTATCTTTCACATCATTTCAACATGCAGAGTTACATTACTCACAGGTGATGTGTCCATAGGTCTGTGCTGCTCGACGAAAAGTGCTGCTTTTTGCCTTCCTTCGTTCTCGTGATAGGATCCAGATTGGCTTTTCAGTGTAGTAAACACGAGGAAGGGAGGGAGTGTGTGAGTGTGTCTCCACGTTCCAGATAAACATTAAACATTCCCATTATTTTATGGTACGAGGTTAGGGCTTCATAAATTTATAGAGAGTAAAAAGTGAAGTGAAATGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCCACCAGGCTCCTCAGTCCATGGGATTTTCCAGGCAAGAGGACTGGAGTGGGGTGCCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATCGAACCCAGGCCTCCCCACATTGTAGGTAAATGCTTTACTGTCTGAGCTACCAGGGAAGCCCAGTAGAGAGTAAAGTCAAGTCTAAACCTGGACACTTGTAAACAAGTTGAACTTCGTGGATTTTTCAGATGCCATCAACTTGCTACTAGCCTTAGCAGATAGTGATTGTTAACATGGCTTGCAGTACACCACTGGCATTCTTAGGTCTGTACTTGAATGTATAGTTAGCATATAAAGAGCTCATCCTCGCAGCGTCTAGGTCTAAGCATCTGGTTTCCAATGGCAGGGCTTACATGCAACAAAAAATGTTGGTGGTAGGGCAATGATTTCTGGGTTGGTCAGAGATTTTGTGACCTTTCCAAAATGGCATCACCTTTGATAGTGATGAACGTTTCCAAATGGATGGAAGCAGGGCCCCAGGAGGCAGTGCGCTGTCAGGCCATGAATCTCCTGATAGAAGGATGCGCCTTGCTCAGCCTCTGGTCTGGGCTTGTCTCTGGAAATCCTGTTTGTAGTGCTTCTTGCCACAGTTACGTGGTGTGTTCCTCCTCAGTCATGCCTGTTTAGGGGCTGGTTCCTGGAAAGGACCTGTAACGATGCAGTGGACTGTACCGTTTACTCTTTCTTTACCTCTAACTTGAAAGTATAATTGCGAAATGTTGAAATGGCTTTCTCTGCTACTCCAGCGTGGTGGAACTCATTTACCACAGAAGCCTTATCAAAAAGTCTTATTTTGTAACAACCTGGTAGATACTGTACCTAACAACATGATTTGTATTAGCTCTGTATCAAAGTATTTGCGGCTTCAGATTTTTTAACATCTATCTTTTTATAACTCTGAGAACTGAGCACATTATCTGGTAATTGTTGTACATTTTTTTTTTCTGTCAGTGCTTTAGGATTGGCAATAAATTATTTCTACAGGAGGTCTGAAAGTGGAAAGAATGATTTGATTTGATAAAATGAATTGCTGGTCATCAAGGCTTTTTACTTTTGTACATATTTTGCAAAATTTTTTGCCTCTTGCTATTAATATTTGCTTTGTAAAAATTACTGACGTTTAATAAACATTTATAAACTGTCCCATACTATGATGTTATTTAAACTAACTCTTTGATTAATGTCAAGAGCAAAGCAGAGACTTAAAGTCCCAGTGGCTGGAACCTCAGAAATCTCTCTTTCGGCAGATCTCTGACGATACTTTGACTTAAGTTAGTCTATAAACGTTTCCTCACTGAAGAAGGGATGTGGACTTCAAGGAAGTTCCCAAACACCCGTTTTGATGCAGCAGCCAGAAGCGGGAAACGCCACCTTTTCTCTCTGCTGCTCCTGAAATCACTGAGGTCGAGCACCCGTGTCTGGGTTCACGCTTTGTCCACCTGCCAGTCTAACACGGTTGCGTCTTCTGTAGCTGAAATGGCGTTTTAAGAGCAAACTAACATGATAGCACTCCTTTTATTGCTTCAAGGAACTTTATGATTTACCGAAAAATTGCAAAAATAGCAGTTTCCTAAAACTCCACACTGG EMBV3_31822 TACCCCTGCGGGACGGCATTGATGACCAGAGTTACAAGCACCTTTTCCAGCCAGTTATCA Gene GeneID:404125|HDAC3:XM_002689239:113_cdna Constitutive 0 NULL GeneID:404125 7 GENE HDAC3 NULL histone deacetylase 3 EMBV3_35751 CATGGTCATGAGAGAACTGCCAGGCCTTTGTTCATTTTCCCACCTCCCAAGTATTGGGCT Gene BVT0102_114311 + 0 NULL GK000021.2:16912955-16945796 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120599 TCONS_00120602 TCONS_00120600 TCONS_00118720 TCONS_00120597 TCONS_00120598 TCONS_00120601 TCONS_00120603 2 XLOC_073206 XLOC_072701 Coding TCONS_00120597 XLOC_073206 Coding Coding KLHL25 21:16943442-16975762 j TSS90040 4845 1 TCONS_00120597_4 589 0.106295149638803 3 0.850181008075745 0.00331516430994452 0.000181327849119557 0.00194875700037038 2.0075922427327e-08 0.00413710290742432 0.000184043392436261 0.00192397661123959 0.00255012936036565 0.00254545639083602 0.000567612170250454 0.0011779798764758 5.25741430320032e-05 0.000892613409873484 0.000619775203832948 0.000550416158344586 0.000628909512969845 7.4502822618175e-05 0.000111434971453411 0.00157384933427562 0.00378985097453735 0.00160339578528077 0.000161922170619145 0.000285338130879266 3.20215476015379e-10 1.60466179264636e-07 0.00219797471059486 0.00276988678139679 0.000340536452674647 0.000134877782513858 0.000269234793611072 XM_005221754.1 KLHL25 PREDICTED: Bos taurus kelch-like 25 (Drosophila) (KLHL25), 0.0 6168 99.97 0.706501547987616 NM_022480.3 KLHL25 Homo sapiens kelch-like family member 25 (KLHL25), mRNA. 0.0 2331 84.38 0.43859649122807 TCONS_00120597_4 sp|Q9H0H3|KLH25_HUMAN ENC2_HUMAN Ectoderm-neural cortex protein 2; 0.0 1191 95.59 0.99830220713073 8 coding 0 0 0 0 -1.45955412756241 0.0203196928895908 -0.0899981751130274 0.381253389813094 GTGCTTAGTTTGTTTTCCACTTGAAACCTGAACAGACGGCTGCCCCTGCACCCCAAGAGCTCCCCGAGGGTCGGCTCAGCATGTCGGTCAGCGTCCACGAGACCCGCAAGTCGCGGAGCAGCACGGGCTCCATGAACATCACGCTGTTCCACAAGGCCTCGCACCCCGATTGCGTGCTGGCGCACCTCAACACGCTGCGCAAGCACCGTATGTTCACCGACGTGACGCTCTGGGCCGGCGACCGCGCCTTCCCCTGCCACCGCGCCGTGCTGGCCGCCTCCAGCCGCTACTTCGAGGCCATGTTCAGCCATGGCCTGCGGGAGAGCCACGATGACACGGTCAACTTCCAAGACAACCTGCACCCTGAGGTGCTGGAGCTGCTGCTGGACTTCGCCTACTCGTCGCGCATCGTCATCAATGAGGAGAACGCCGAGTCGCTGCTGGAGGCGGGTGACATGCTGCAGTTCCACGACGTGCGGGACGCGGCCGCCGAGTTCCTGGAGAAGAACCTGTTCCCGTCCAACTGCCTGGGCATGATGCTGCTCTCGGACGCCCACCAGTGCCGCCGGCTCTACGAGTTCTCCTGGCGCATGTGCCTGGTGCACTTCGAGGCCGTGCGCCAGAGCGACGACTTCAACAGCCTCTCCAAGGACACCCTGCTGGACCTCGTCTCCAGCGACGAGCTGGAGGCGGAGGACGAGCGCGTGGTCTTCGAGGCCGTGCTGCAGTGGGTCCGGCACGACCTGGAGCAGCGCAAGGCCCACCTGCCGGAGCTCCTCCGCGGCGTGCGGCTGGCCCTGCTGCCCTCCGACTGTCTGAAGGAGGCCGCGTCCGGCGACGCCCTGCTCATGGCGGATGAACGCACACGGCTGCTGGTGGACGAGGCGCTGCGCTGCAAGACCCGGATCCTGCAGAACGACGGCGTGGTCACCAGCCCCTGCGCCCGGCCGCGCCGGGCCGGCCACACGCTGCTCATCCTCGGGGGCCAGACCTTCATGTGCGACAAGATCTACCAGGTGGACCACAAGGCCAAGGAGATCATCCCGAAGGCGGACCTGCCCAGCCCCCGCAAGGAGTTCAGCGCCTCGGCCATCGGCTGCAAGGTCTACGTCACGGGGGGCCGGGGCTCTGAGAACGGGGTCTCCAAGGACGTGTGGGTGTACAACACCGTCCACGAGGAGTGGTCCAAGGCGGCGCCCATGCTGATCGCCCGCTTCGGCCACGGCTCCGCCGAGCTGGAGAACTGCCTCTACGTGGTCGGGGGCCACACGTCGCTGGCCGGCGTTTTCCCGGCCTCGCCGTCGGTCTCGCTGAAGCAGGTGGAGAAGTATGACCCCGGGGCGAACAAGTGGACCATGGTGGCCCCGCTGAGGGATGGCGTCAGCAACGCTGCGGTGGTGAGCGCCAAGCTGAAGCTCTTCGTGTTCGGGGGCACCAGCATCCACCGGGACATGGTGTCCAAGGTCCAGTGCTATGACCCGTCGGAAAACCGGTGGAGCATCAAGGCCGAGTGTCCGCAGCCCTGGCGGTACACCGCGGCCGCCGTGCTGGGCAGCCAGATCTTCATCATGGGCGGCGACACAGAATTCACGGCGGCCTCGGCCTACCGCTTCGACTGCGAGAGCAACCAGTGGACGCGGATTGGGGACATGACCGCCAAGCGCATGTCCTGCCACGCGCTGGCATCGGGCAACAAGCTCTACGTGGTGGGGGGCTACTTCGGCACCCAGCGGTGTAAGACCCTGGACTGCTACGACCCCACCTCGGACACGTGGAATTGCGTCACCACCGTGCCCTACTCGCTCATCCCCACGGCCTTCGTCAGCACCTGGAAGCACCTGCCCGCCTGAGGTGCAGAGCCAGCCAGACGCTGCGCGTTTCTCCCCGCCCCACGGCCACGGCCCTCGCTCTTGCACGTGGCCCTGATCTTGTCCAGGGGATGCTCCGCCCGGCCCAGCGCTCTGAGCCGCCAGAAGCCGGCCCACCAGCCCTGGGAGTGGCGGCCTCGGGGGCTGCTCTGAGCTTCAGGGAAGAAGAGCCGTCTCCGTGTCCTGTGGGTCTGGCTGAGGCCTTGCCTGCTTTGCAGTGGTTTGCGGGGGGAGAGGACCTTCCAGGGGGCGTGGACGGATACCAGGACTCTCTCGGCCTGGAGGAGAAAGACACGTCTGCCAAGCCTTGAGGGCATCCTGGACTGGGGCAGGGGGCTGGGTGGGCTGGGGAGGGCGGGCAGCACAGTCCTGGGCTCCAGGCTTCCCTGGCGGTGTTGTAAAGTCTCCCCACACAGGACGCCCCTGGGAATGGGTGCATCAGGGCTGAGACTGGATTGTGCTGTGGAGAAAGTCTTAAGGAAGAGAACCGTTCAGTGACAACCACTAGGCTTTCTCAGCAAATGACCTCCAGGCCACCAGTGTTAAATAGGCTCCTGAGAGTCGGGCCTCACCCCCAGCGACCTCACCATCTCCCCGTCAGACCAGCCATGCCCCGGGTGCAGACACAGGTGTGCAGAGGCCCTGGGTGGCACGTGCCTGTGGGGCTTCCCATCACCTCCCCTCAGAGCCCAGCCCAAGAGGCAGCGATGACCCCATTTCCTGCCAGGAGCACACTGACCCCAGAGTGGGACCATACCTGCCCAGACCAGGAGCACATGTGAGCTGGGGACCACTGGGGGACTCCAGGGTGCCCACGACAGACCCCACCAAGGGCTGGACTCAGCTTGGAGGATGACACAGCCCCATGACACTGGCCTCTCAACCTTCCAGCTGGTGATGGGGTCTGGCTCATGTGTCCCCTGAGCTCAGAACGTGACCATGGTCATGAGAGAACTGCCAGGCCTTTGTTCATTTTCCCACCTCCCAAGTATTGGGCTCCTCACAGGTCCAGCCGCAGCCTTGGGTTTCTGGAAAGGTCGGCTCCTACCAGCGGCTCCCGTCACGTAGTGTTAGAGGGTGTGGGCTTGTTCCCTGGCTGCCCTGGGGCACCGTGGGGGCCAGACAGGTGGTTTCCCAGGCCGCATGCCGTGCGCACCGTGTGGCTTGGCGCTCCCAAGTAGGCTGTAGTACTCGTGGGGCCGGTTGCTTTCCAGTTGGCCCTGCCCCCTTACAGGGCCTGTGGGCGTCTCCTGGGGCCCCAAGGGCATCTTTAGGGCACAATTCGCCCACATATGTGCACCAGCCATAGGCCATCAGTTTCCCCTGGGGGAAAGGCAGAAGGCACGTCTCCAGGTTCCTGGGACCCCACGGCCCCCGTCTTTGTCAGAGGCCACCCCCTGCTCTCAGTGCTTCCTCTCAGCCACCCAGAAGCCGGGGCCCTGGTCCCAGGAGATGCCTCAGCCTGAGACACCCGGGAGGTGGCAGCCCCGGCCTGTTGGATTGCTGCGCTAAGCACAGGTCTGACAGCACAAAGGACCTCACAGTGGTGCTTTCTCCACAAGTTGTGTTGTTTTTACCCATTTCTAACTTAATAAAAGAGTTGAGAAATCTTGCCTTCCTGGGGTGCCGAGGCCAGTCTTGGGGGACGCAAGGCGTGAGCAGGCTGATGTCCGCTGCAGCAGTCAGGGCTCACGGCCTGCTGTGCTGGGGAAGACCCACAGGCACCCAGAGGACAGGGCCTCCTGCCCTCAGGTCGTTTCAGCACCACAGGCCTTACATTGATTCTCCTGTGGCGTGCTGAGTACTCCTTCCCTGAAAAGCCCCTGCATGAGTGTCAACTTAAAGATGTAATTCCCCTGATTGCCGCGTTTGTGTGCTGTGAGCCCCCAGTTAACGCTAATTTGTGTGAAAGTAACACAAGCAGCGTTAAGGGAGGCATCGCTACTCGAGTGTCCAGCATCAGTTACAACAGTAATGCCCCTGTTTGCCTGTGCTCCTTTCACACGTGTTCATAGCTATCAGGCTCTGTAAACTCAAGAAGGTGGGACAGACAGGGCTGTGACAACCACAGAGTAAAGAGGAGGCCCTGTCCAATGTCCCACCGCAGGCTCTGGACGCCAGACACACCCTGATCAAGGGGACGGTGGCCAGCACACCTTGGGGCAAGATGAGGCTGGCGTCTGTTCCAACAGTGGCCTTCACACCTAAAATACTGCACTCACACAGTCTACACAAGGATGCTCCCACAGGAAAAGACCCCTTCGGGACCACAGTCGGCAAGTGTTCCTTCTAAATGTATAGAGACGAAAGTAAAATGAAAAAGCAGAGGACCTAATCCCCATTAAAAGAACAAGAAGTCCTGTGAAAGTACAAATAATGAAGTGGACTTCACCAGTCTACTAGACCCCAAGTTCAAAGAGCAGCTAATAGAAGTGCCGAAGTCATTAAGAAAGATTGTTGATAGAAATTACTTCAAGCATCTTTTCGGAACACAGTGGGTATGAAGCTCAAGATCAATCACAGAAAGAAAAATGGGGAAAAAATAAATACATGGAGACTAAACATGCTACTGAAGAAGCACCGCTCAAGGATCACATCAAAGAGGAAATCAGAAAACAGCCTGAGACAAAAGAAGTGAGACGGCGATCTCAGGAAATCTGTGGGACGCAGCGCAACAGTTCTAACGGAATTTCATAGCGATACAGGCCCTCCTGAAGAAGTTAGAGACTCTCAAGCAACCTAAAAGATTAAACAAAACTCAAGTCAGAAGGAAGGGAATAAAAAGTTCAGAGAGAAAACAGATTTAAAAAGAACAATGAAAAAAAAAAAACCAGTGAAACTGAGCTACTTTTTAAAAAATAAAATTGACAAACCTCTAGTCAGGCTCACCAGAGAAAGAGAGAAAACCCAAATAATCCAAATAGGACGGAAGAAGAGAAATAACTTCCAGTATCACAGAAACACAAAAACATCATGC EMBV3_31247 GAGTTGTAAGAGTTGGCACCTCTTTTTGTTGCTGCTGTTGTTCAGTTGCTAAGTCATGTC Gene BVV0102_047130 + 1 EMBV3_02516 GK000028.2:26801992-26876455 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01414 TGGAATGAGCTTCTTATTGGTGATGTGGAACTGAAAAGGGTGATGGCTTGCTCCAGGTGC Gene GeneID:537028|MOSC1:XM_002693961:154_cdna UTR3_Alt 2 NULL GeneID:537028 16 GENE MOSC1 NULL MOCO sulphurase C-terminal domain containing 1 EMBV3_17295 GGCAGCCAATGATTCCCAGTTGCGAAATCTGCCCTTAACTTACATCCTCACCTGTAAACA Gene GeneID:528748|LOC528748:XM_002685010:152_cdna Constitutive 0 NULL GeneID:528748 1 GENE LOC528748 NULL similar to mCG132335 EMBV3_30106 AAGGAGCTGCTGGGGATCCTGGTGTCCTACAAAGTCAGAGTCAACCTGATGGTGTCCTGT Gene GeneID:281011|ARR3:NM_173994:38_cdna Constitutive 0 NULL GeneID:281011 X GENE ARR3 NULL arrestin 3, retinal (X-arrestin) EMBV3_17973 GGACCGTATGGTTGGGTCACTGGTTCCCTTTCCACATTCTTACCCTTGACAGAGCTTCCA Gene BVT0102_189313 + 1 EMBV3_41913 GK000012.2:89009423-89056706 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32814 AACCAAATTGTCCTGTTTGTAGGCTCCGTGTTTGTCTTAGTCGGGCCCCTCTGCCTGGTT Gene GeneID:505454|LOC505454:XM_002687023:85_cdna Constitutive 0 NULL GeneID:505454 4 GENE LOC505454 NULL similar to Olfactory receptor 2A12 (Olfactory receptor OR7-10) EMBV3_41351 TGGGAAGGCGGCATCTATGACTTCATTGGGCTGCATCCCCCTTTGGGTTGGAGCTCGGGG Variant GeneID:535038|TMEM147:NM_001034624:691_cdna 316^452 3 EMBV3_09300 GeneID:535038 18 GENE TMEM147 MGC127848 transmembrane protein 147 EMBV3_01262 TGGCACCAGTTCCTCCTGGATGGGATATAGTCAGAATATTTACTTCAACTCTACCTAGTA Gene GeneID:511513|CDK12:XM_002695957:267_cdna Constitutive 2 NULL GeneID:511513 19 GENE CDK12 CRKRS cyclin-dependent kinase 12 EMBV3_29650 GCCACCCCATTGGCACTCTTCTGTGATGATGGAGATGTGAAGTTTGTTCTGGATTCTGCC Gene GeneID:526913|MGC148942:NM_001080289:134_cdna Constitutive 1 NULL GeneID:526913 11 GENE MGC148942 NULL hypothetical LOC526913 EMBV3_19946 GGACCACCCGCTGCCCCTACAAGGACACGCTGGGGAGTCCATGCAGCCCAACCGCAGAGC Variant GeneID:615695|EIF3G:NM_001079623:96_cdna 572^722 1 EMBV3_30429 GeneID:615695 7 GENE EIF3G EIF3S4 eukaryotic translation initiation factor 3, subunit G EMBV3_05775 TGAGGCGGCCAAGATCAGAAACCTGCCCTGTTCAGAAGTTTATCAGTGAGGACCGCCTGC Variant GeneID:508389|RFC5:NM_001075358:93_cdna 161^225 3 EMBV3_38795 GeneID:508389 17 GENE RFC5 NULL replication factor C (activator 1) 5, 36.5kDa EMBV3_29541 CCTGGGCCTCCATTACTGTCTCCTGGAATGACCTTGACGTTTCCCCTTTACCTGTATGCA Gene BVT0102_055503 + 0 NULL GK000007.2:110106900-110335932 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218328 TCONS_00218327 1 XLOC_131681 Coding TCONS_00218327 XLOC_131681 NonCoding Coding - 7:110328606-110343249 - TSS162349 959 1 TCONS_00218327_2 104 2 0.934640076492282 2.16895828732804e-12 0.000220037504563722 0.000198758592701307 7.35613913478191e-05 0.000139002722062072 0.00018606519849221 0.000127701693158752 0.000371681391798675 4.35209503535651e-05 0 0 7.45698053004724e-06 0 0 0.000214340100339427 0 0 0 5.88401501383042e-11 0.00044243487857361 5.43087728961645e-05 0 0 0 0.00225966521191912 0.000306488979578979 3.1863927151617e-05 0 0 0 0 noncoding 0 0 0 0 -0.131795134913015 0.306872469791382 -0.0629093349636104 0.270585042828892 GAGGATGGGTCTCCTGGTGCAGCGTGGAGTGCAGCTCCAGGCAATGGTGAGGAAATGGAGGTTTCAGAAGATCAATACTTTGGCCACAGTCACACGGTGACTCTGCTCCAGAGCAAAGACCTTAGTCCTGCGCTGGAATGCTGCTTTCACAAGAGCTGTTGGAATGGATGTGACAGAGACGAGAGGAGCGGATGATCCACAGAGGAGTTATTTTGAGAGCAGTTAACTAGAGACTTGGGGGTAGAAAGATTGTGTGGACCTGCTAACAGCCTTGGAGAGTCAGAATATACATGAGGAATGAGAAGACAGTGGAAGGAAGAAATGAGAACTTTCAATTATTAGGGAAGAGACCAAGAAACAAATCAGCTGCTCACACCATCTGCTCTGTGAGCCTTCCTGGTGCCTATCCACTGAGACCGCCTGGGCGAAACCCCAGACCTCCTGGGACGGTCACACAACCGATGGATGCAAACACAGAAGCCAGCTCGAATGGTCATCTGCCCCAGGATGACTCTTGCCCTGGGCCTCCATTACTGTCTCCTGGAATGACCTTGACGTTTCCCCTTTACCTGTATGCACCTGGCTCTGCTTCTGGATTGTACTGACTTCCCTTTCCAGCTGCCTGATGAAAATCTCCACTGGGAGCATCACCTGTCCTCAAACTCAGCACTGCCAAGCTCAACTAATTTCACCCCCAAACTACTCCTCCTAACTCCCTGTTTCTCCAGTTGACCAGGTTTGCAAAAAAACAATCATCTTTGATGACTCATTTTCTTTCTCTTCCACAGAATTCAGCTGATAACCAAGTTGATGCAACTTCCATCTCTAATCCATCACCTTCACATTAGGACTACAATTCTGGTTTGGACCCTCATTTTCTTTTTCAGAAATGATTATTGATAAGATTATTGATAAAAGAGCCTCTTATCTCTCAACTCTCTTATATTTTCCTTCATCTT TCONS_00218331 s 3' 69210 TCONS_00218331 s 3' 55480 EMBV3_18697 GAATTGGTGAGATGGAATTTTATAGATCGTCCCTGTGTCCCAGCCTCATTCTAACTCCAC Gene GeneID:506527|PEX11B:NM_001075266:56_cdna Constitutive 2 NULL GeneID:506527 3 GENE PEX11B MGC139582 peroxisomal biogenesis factor 11 beta EMBV3_25361 ACAGCATTTAGAGGGCAGCTGTGGGGAGCAGACATCCTGAAGAAATGGTAGAGTGGAACA Gene GeneID:614134|RNF41:NM_001046525:55_cdna Constitutive 0 NULL GeneID:614134 5 GENE RNF41 MGC137581 ring finger protein 41 EMBV3_09898 GGAATGAAGATGACAGAGCAAGCCCCTGTCTGGGAGTATACAGAGCGCTGGGGATCAGAA Gene GeneID:513998|FBF1:XM_002696206:249_cdna Constitutive 0 NULL GeneID:513998 19 GENE FBF1 NULL Fas (TNFRSF6) binding factor 1 EMBV3_33401 GTATAGGGACCATCACACACAACCACTTTCTCCCTGGTGGGAAGCATGGCAGCCAAAGGT Gene BVV0102_005016 + 0 NULL GK000010.2:36554964-36577284 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35128 TTACACTCTGGACATCCACAGACCTGAGGACTGTTGGGAAAAGTTCACCTCCAACCGAAC Gene GeneID:504633|COQ2:NM_001045893:7_cdna Constitutive 0 NULL GeneID:504633 6 GENE COQ2 MGC137628 coenzyme Q2 homolog, prenyltransferase (yeast) EMBV3_22886 CATGAGGTTGTCTAAAACGAAGAAACACGTCAGCCGAGCCTATGGTGGTTCCATGTGTGC Gene GeneID:505603|RPL34:XM_002688083:126_cdna Constitutive 0 NULL GeneID:505603 6 GENE RPL34 NULL ribosomal protein L34 EMBV3_05621 GTGCTGCAATTGTTCAAGGTTTCCCTATGTTCAAAGGCGGACGGTGTCTTTGCATAGGCC Gene GeneID:516104|CXCL11:NM_001113173:65_cdna Constitutive 0 NULL GeneID:516104 6 GENE CXCL11 NULL chemokine (C-X-C motif) ligand 11 EMBV3_30835 GCTGGCAAGCAGCTGGGGTCTAGTTGTGTGTGAGGAAACTATCAGCTTCTCTGTTGGTAG Gene BVT0102_142713 + 1 EMBV3_17276 GK000025.2:36411893-36421450 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147070 TCONS_00147068 TCONS_00147069 TCONS_00147067 1 XLOC_089286 Coding TCONS_00147067 XLOC_089286 Coding Coding POP7 25:36418271-36422331 j TSS109824 3889 3 TCONS_00147067_2 140 0.101311391103111 2 0.0423749692042374 8.29917434456088e-09 1.99109986137465e-08 2.40770139574941e-07 5.60177377432841e-11 0.000174617818367369 5.47162064137115e-05 5.3229506009673e-05 5.28106282824695e-11 0.000747953254454642 9.54735320628888e-05 1.08705949437395e-11 1.13116448618032e-06 0.000148228232179215 0.000318837230805321 0.000109448045698357 1.4040413033626e-05 5.21158145948436e-06 0.000251904901926035 0.000132738922426506 0.000891296835423756 0.000203243869746998 1.32528296251125e-09 3.21474945940455e-11 8.57538115180924e-11 4.22130586834134e-08 2.62838230714513e-05 0.000123401503454568 1.54575708829379e-05 7.08846897786954e-06 1.46867075940781e-05 XM_005225219.1 POP7 PREDICTED: Bos taurus processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae) (POP7), transcript variant X2, mRNA. 0.0 1281 100.00 0.182309076883518 NM_005837.2 POP7 Homo sapiens processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae) (POP7), mRNA. 0.0 641 80.99 0.173566469529442 TCONS_00147067_2 sp|Q0II25|POP7_BOVIN POP7_BOVIN Ribonuclease P protein subunit p20; 3e-100 288 100.00 0.992857142857143 2 coding 0 0 0 0 -1.39465390123737 0.0236883338404923 -0.0201080092875089 0.839789131499877 GTTGTAATGAATGTCCGCGAACTGAGGGGCACACAGCATGGCCGAAAACCGAGAGTCCCGCGGGACCGTCGAGGCGGAGCTGGACCCGGTGGAGTACACCCTGCGGAAGCGGCTTCCCCACCGCCTGCCCCGGAGGCCCAATGACATCTATGTCAACATGAAGACTGACTTTAAGGCGCAGCTGGCCCGCTGCCAGAAGCTGTTGGACGGAGGGGCGCGGGGTCAGAACGCATGCAGTGAGATCTACATTCACGGCTTGGGCCTGGCCATCAACCGAGCCATCAACATTGCCCTACAACTGCAGGCGGGCAGCTTCGGGTCCTTGCAAGTGGCTGCCAATACCTCCACCGTGGAGCTTGTCGATGAGCTGGAACCGGAGACTGACTCACGAGAGCCGCTGACCCGGATCCGCAACAACTCTGCCATCCATATCCGTGTCTTCAGGGTCACGCCCAAGTAACTGAGATGAAGCTGGCCCACCTTATCCACCCATCCCCATACAGCTGGGGCTCAGATGTGGCTCTTCTTGTCCTGAGTACTGTCATGGATCTTTCAACCAGAGCCATGTAGGAAAAAGCCCATCCGCTGGCAGCCCGGAGGACTCTGAATTGAGAGGGCAATTACCGTCTTTTGTTGGGCCCAAGCAGTGGGTCTTCCTGGATCTTTGTGGTCTGTAGCCATTGTCCTGTACAATAAAAAGTTTCAAGTTATGTTGCTGCCTGGCCACCCACCCCGCTGCACTGCCTCTCCCCTGTGTAAATTCTGGAGAGGAGAGTAGGAAGAAACTTGACAAAGATTTAGATACAGGAGGGGAACCCTGGTGTTTCCTGCTTTCATAGAAAGAACATAAATTGTCCTACAGACACTGCAACATAAGACAAACGTTAGTGCAGTGCAGAAGCCTGACAGCCCCAGTGTTTGTTTTAAAATATTTCATCCTTGCAGAAGAAGGCAGAGAGAATAAGTAGATATTCTTGCCTGCTGGCAAGCAGCTGGGGTCTAGTTGTGTGTGAGGAAACTATCAGCTTCTCTGTTGGTAGTTCCTGGGCACAGGAAGGATGAGGGCTTAAGGAGAGAGAAACACAAAGATGGAGCCTCCTTTGTATTAGGTTGTGGGAGGGATTGACACGGCTTCATTTGATCCCTGGTCCTGGGGGATCCAAAGTGTTCTAAACAGCTGTGGTTCAGACCCCTTCACACCCTGTGGCTGGGCTGTTCTAAGTGGGAAAGAAAAGCCTTCCCTCTGACTTACTGGGCACACAGGTCATAAGCACTTATTTGCTTGGATATTTCTAGGAGGATCTGATTTTTCGTATTTATCAAACGAGTCGTCTAAAGCAATGTTTATCAGAGCAGTTGATGACCCATATGTGGGTCTTGATTTACTAGGTCAAAACCTTTTTAAAAATCAAGTAAAAAGTAACTTCCATGGTAATATTTTGTTGGCATTTTTATAGATATGTATATAGATGTGTGCTAGTTATGACATCGATTTTACTGTTGGGGGAGGTCACAAGAGCTTGAAAGACTTTGATTTAAAGGTTAGTAACTGAATTTGGTTCTAGTTTGCTTGAAGGCAGTTTGGTTTGGGATTCTGAAAAACAGCCTTCTCATTTGGCAAAACCTCTCCCTCTGGCTTGAAGGTTCCTGCTGAGGAGGGACTCATGCTGTGGAAGTGACTGCCAGTCGCACAGGAAAGCAAACTCTTCACAGAAGGACTGGGGCTTCGTTCTAATGACTAAACACAGCCCAAGTGCCTTCTGTGAGCCACAGACCTGGGCTGGGCCCTGGGGATACAAAGGTGGGTATAAAATGGCCCCTGCCTTCAAGGAGTTCACCATTTAGTTGGGAAGGTGGATATACCAGTTTTCGTGCAGTGAATAAGATGTGTGATGTAAGAGGTAAGAACAGCCACAATAGAGAAGTGCAGAGAAGGAAATGGCTAACTTCCTGCTGAGGTCTGAGATGGTTTCACCTTTGACCTGGGTTTTGAAGTATGAAGAGGAGTTTGCCAGGCAGAAGAGAGGGGAGAGGCCACATCAGGCAAAGGCATCAGCGTGTACAAAGGGGATTCACTAACAGGGTGTGTTGTAGGACTGGAGGGTCACTCGGCAGCTACAAAGTAGGAAGCATTGGGGAGATTTGACGGAGACGATTCTATCGGATGCCCCCAAATCCCCCCATCCCAATTTCCCTATCAGCCTTGACTGCAAGGCTCCCTTGCCCAGGAGGCCCCAGTAACGGGGGAGCCAGCAGGGAGCTGGCGGGAGTTGTGTGTGTCCTTGCACGTATGTGCTCTGGTCTCTGTGCTCCTGGCCCAGGCCCAGCAGAGGTGGTAGCAGCAGCCCTTTTGCATTTGGTTTGTTTTGGCTGCCACATCTTCCAGCTTATTTGTTGTTTCTGCTCCATATTCTCTCACTGCTTGCCAGTGGGGCTTCCCTCAGTGGCAGAAACAGCCCCTAGACATTGCCACCGATGGGGCAGGTAGGGGGTGTGGGGAAAGTGCCTGCATCTGTCCGAGTGCACGCCTGGTGGATGGGGCAGGGAGCTCTGCAGGGAGGCCACCAGCCACCTCAGCTCCCCCGCCCTCTGGGTTCTCTGCAGTGTCTTCCATCACAGCTTGGGAAGCTGGAAGGTGACGGGGGCAGAAAGGATGTCCAGGTGCAGTTCCCCTCCCTTCTTTTTGCTCAACAGCTATGGAGCCCACAATGAGCGCAAAATGACCTCCTACTTCAAAAACAGTTCCCCCAAGGTCAGATTTGAAATGCTTGTCTTGGAGGTGGGAGTAGACCTCATCTCTAGTGTTATTGAGAATTCACTGCTTGTGCAGAATCTCTGTTAGGCACCAGGTCTGCCCAGAGAGGTACGAACCCCTGGGCCTCTAAAAACTAATAGAAAAAAGGACAGACAGATTTGGAAAGAATTAATTTACATAGTGCTTGGAGCCTGGCATTAGCAAGGGCTCCAGAAAGAGGGGAAACTGTTGGTAGTGTGAGTCATTTTGCTAAGGAATAGTTTGGTCCTCTACATGGGGATGGGGAGAGGGGAAGGAAGGTGGTTTGTGTGTGTTTGATCTACAAGGCTGGGTTCTTAGTCCTGCTGGCTTTTACTTTTGTGGCACTGGCGGCGGGAAAGAAGACGGGCCCTCAGGACCCAGGAACTGGTGTGGATGGGTGGATGATCCTTCTAGGAAGTTCCTTGCACTCTGTCCTGGTGAGTTCTTGGTGCTTGGTCAGGAGCCGGGAGAACAAACCCTGGAGCCTATGGAGAAGATGGACTAGAGGCGTGTGTAAATGTAGTTCTGAAGGGAAGAGATGACCCACTGCAGGTTTGGGGATGAGGCAAAGGTTATCCCACCAAGAGAGAAGTCTATGAAAATGACCACTTAAGACTCCATCTTCCTAAATGACACTTATGGGTGCTTTTGAATTGATGTTTTATTTTTGTTTGGACAGGAAAGCTACTGCGGCCAATTTAGCAGCTCTGTCTTCTGGTAAAGGATGGGAAGGACATGGGTAAAGGACATCCTTCCAGTAAAGGGTGTGTGAAGGAGCTTGGGAACATTCAGCCGTACCTGAGAACAGGAGATCCTAGGATGTGGCTGACGCTTCACAGAAACCTGAGCTGGGGAGGTGCATCTGGAGGTGGAGGTCTTGGTGCTTTGCGTGCCCTCCTGCAAGGACTCAAGCACTGGGGGAGAGTCGAGACTAGTAACCAAAGAAGGTGGCCTGGTAATGCTTCAGGGCCTGTCCAGGGTGCGCCCAAAGGCCTCATTCAGTTCAGGGTCCTTGGGATGTCTCTGGGCCTCCCTTGGGAGGACACCCATGTTAAGGGGACAAGAAAGCCCTGGTTGTCTCCAGGCTTTGAATAAACTGAGTGTGAGCATTGC EMBV3_02827 ATCACGCTTTGTGTATACTGTGTGCTCTGTAGGTAAGCCCCGCAGAAAGTAAGATGTGCC Gene GeneID:532021|PRMT10:NM_001099051:13_cdna UTR3_Alt 2 NULL GeneID:532021 17 GENE PRMT10 MGC151858 protein arginine methyltransferase 10 (putative) EMBV3_04709 CTTGAAGGGTGGCGGAGGCGGCGGAGGAGGCGGGAGCCCCAGGCCTGCCCCCTCATCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23501 CTGCAGCCAGGGATGGCACACTCCAGCCAGCACAACAAAGAAAACTGAGGAGGCAAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10906 AACGGAGAAGGAGAGACAGAGCTAAACAAGGGCCGTTGTTCAAGAGAGAACTGCAAGTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10215 AACGGCCTGCTGCTTCTCCTATGTCGCCCGGCAGCTTTCTCGCAAAATCGTAGCTGACTA Gene GeneID:282170|CCL3:NM_174511:179_cdna Constitutive 0 NULL GeneID:282170 19 GENE CCL3 CCL3L1 chemokine (C-C motif) ligand 3 EMBV3_13215 GCCAAGCCCGCCTTCTTCGGTCTCCTGCTGGGCCATCTCCCAGGCCCAGAGTTGGTGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00473 GGCTCTGCACTCGCTTGGACAACTGTGTGACCTCCGGAACAAGGTGAATTCTTTACCAGT Gene BVT0102_225098 + 1 EMBV3_41239 GK000011.2:61482380-61495910 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34613 AAGACCAGAGCCCTCGACAAAGGGAGTAGCAGAAGTCGGGGATAAACGTCAATCGTGTGA Gene GeneID:540716|SLC39A7:NM_001076237:152_cdna Constitutive 0 NULL GeneID:540716 23 GENE SLC39A7 MGC142379 solute carrier family 39 (zinc transporter), member 7 EMBV3_42202 GAGTGGAGACAACTGAGCGACAACAACTATAAACGCTCGCACATGCCACACCTTTCCACA Gene BVV0101_024315 - 1 EMBV3_12125 GK000014.2:66434636-66447886 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34989 CCTTTCAGACTATTGACCAAATGCGTTACTGATCCTTTTGAAGAGAGGAACGTGGGGGTC Gene GeneID:536936|SUV39H2:NM_001037479:133_cdna Constitutive 1 NULL GeneID:536936 13 GENE SUV39H2 MGC128675 suppressor of variegation 3-9 homolog 2 (Drosophila) EMBV3_12985 TTTTGCCAAAGACCTTGAAATGTTTGCAAGCTAAAATACATCACAGAGAAAAATGAAGAC Variant GeneID:613732|APITD1:NM_001038576:94_cdna 253^319 2 EMBV3_41714 GeneID:613732 16 GENE APITD1 MGC134435 apoptosis-inducing, TAF9-like domain 1 EMBV3_18366 GACCACGCCCCGGACCTTCACCGCCCCGAGGGCCATACAAAGAAACTTAATTTTTACAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14630 CAGAGAGTCACTCTGAACATAGCCTCTCAATAGATGGCTAGCATTCTGAAAGGCAGTTTT Gene GeneID:509431|ASB14:NM_001035070:127_cdna Constitutive 0 NULL GeneID:509431 22 GENE ASB14 DNAH12 ankyrin repeat and SOCS box-containing 14 EMBV3_40109 CATCCACAAGCACCCCTTCTACAACCTCTACACGCTCGACTACGACGTGGCACTGCTCGA Gene GeneID:518647|TMPRSS9:XM_002688953:87_cdna Constitutive 0 NULL GeneID:518647 7 GENE TMPRSS9 NULL transmembrane protease, serine 9 EMBV3_37361 CTATTCAATGCACAGGAGTTTGAGCAACTCTGGGAGACAGTGGAGGACAGGGGAAGCCTG Gene BVV0102_095831 + 0 NULL GK000006.2:110342848-110352431 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13746 GCCACTCGGAGCTAATCCACAACCTCCGCACATGCATATGCACTAGAACTTCTATTTGAT Variant GeneID:613854|PCMT1:NM_001079617:5_cdna 214^350 1 EMBV3_06608 GeneID:613854 9 GENE PCMT1 NULL protein-L-isoaspartate (D-aspartate) O-methyltransferase EMBV3_36679 CAACAGTGAACCTGACAACTGTCCAGATAGGCCGGGCCCAAAGAAACACAGACAACATTC Gene GeneID:516574|MMRN1:NM_001102500:177_cdna Constitutive 0 NULL GeneID:516574 6 GENE MMRN1 MGC155031 multimerin 1 EMBV3_35304 AGAGGCTCTCGAACTCCACCCAGAAGTAACAACGGACTGCCTGTTTCCTGCTCTGAAAAC Gene GeneID:538585|AGBL5:NM_001024564:183_cdna Constitutive 1 NULL GeneID:538585 11 GENE AGBL5 FLJ21839 ATP/GTP binding protein-like 5 EMBV3_28941 GAGAATATGCTTCTATGCCTTCAATTTAGTGTGCTTGTCCCTGTGTCCTCTGCCACTCTG Gene GeneID:100335745|LOC100335745:XM_002688262:188_cdna Constitutive 0 NULL GeneID:100335745 6 GENE LOC100335745 NULL hCG2040572-like EMBV3_32251 AGACCCAGAACTGCTTTTACTCAAAACCAGATCTGGTTCCAAAATCGGCGTGCAAAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22441 CCTTCGTCACCAGCCTGGCCTTCATCAACAGCGTGATCAACCCGCTGCTCTACGTGCTCA Gene GeneID:337885|GPR44:XM_002699257:293_cdna Constitutive 0 NULL GeneID:337885 29 GENE GPR44 CRTH2 G protein-coupled receptor 44 EMBV3_26285 ACTGTGAGCACCCAGGGGAAAAGGAGTAGGAGACAGAGAAAAGGAGACTGCAACCCTGAA Gene BVT0102_146082 + 0 NULL GK000003.2:27794462-27976838 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172708 TCONS_00172707 1 XLOC_104196 NonCoding TCONS_00172707 XLOC_104196 NonCoding NonCoding - 3:27910963-27916180 - TSS128568 562 1 TCONS_00172707_1 41 0.322064056939502 3 0.892829754601227 2.39575246560286e-09 0 0.00013366265104751 0.00293467618916785 0.000668167564343775 2.19067150263721e-13 0 0.000120223132743832 0 1.21806805271546e-10 0 0 0 0 0 0 0 0 0.00014603158984275 2.69487638211958e-11 1.78835179869774e-11 0 0 0 5.87291347799559e-06 0 8.89289097332139e-11 0 0 0 XM_005206561.1 STAT2 PREDICTED: Bos taurus signal transducer and activator of transcription 2, 113kDa (STAT2), transcript variant X1, mRNA. 4e-15 86.0 76.72 0.204626334519573 NM_001172225.2 ZNF540 Homo sapiens zinc finger protein 540 (ZNF540), transcript variant 1e-21 107 83.65 0.181494661921708 0 noncoding 0 0 0 0 0.0970429310731679 0.389986295249767 0.0103268763766596 0.824362104435178 CCTGCAGTGACTGTGAGCACCCAGGGGAAAAGGAGTAGGAGACAGAGAAAAGGAGACTGCAACCCTGAAGAGGGCCCTCACTGGAACCAACCATGCTGGCACCCTGACTTTGGCCTTCCAGCCTCCAGAACTGTGAGAAATAAGCGTCTGTGGTTGATAAGCCTCTCAGTTTTGTTACAGCAGCTTAAGTGGATTAAGAAGCATCCTACCCCAGAACTTCAGAATCACCTTTAACGTAGGTTCGGCCAGTCCCTGGGTACTCCCCACCCCCAGCAAGAGCAGCTCTCTTTTTACTGCTCGTGGAAGTGACTTCACCTCTTGGTGACTCTGTTGCCTGAAGGGCGAATGAGAATGACTCATGCCCACCCCACCAAGCAACCTGCCGGTGAGGCTGATCCAGAACAAAAGCTTCCTCGTCACCGGCTCTCTCTCTGCAGAAATTCCAAAGAGTTGAACCCCACGTGGTCTTGACCCGCCAGGACTCCCTGACCACCTGGCCAGATTCACACAGGCTCCACCCCTCCTTATGCTCACCTGGTGTCCCTGCCCACCCCCATCCAAC TCONS_00172700 TCONS_00172701 s 5' 116412 TCONS_00172700 TCONS_00172701 s 5' 116671 EMBV3_43542 TCCCAAGGGGTCTTCCGCAATCAGGGACAATTTCTGGTGCATAATAAAGAGGGGAACCCT Gene BVV0102_047916 - 1 EMBV3_16945 GK000006.2:109736357-109784687 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27198 GAGGACCCCGCTGCCCGAGGACCGTTAACCAGATGATGAAATTGAAACATGGTGAGGAAT Gene BVV0102_126250 + 0 NULL GK000016.2:18741885-19500375 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068732 1 XLOC_041780 NonCoding TCONS_00068732 XLOC_041780 NonCoding NonCoding - 16:19459294-19468137 - TSS51406 955 3 TCONS_00068732_3 65 0.159162303664921 2 0.892218954987559 0.00197154251922828 0.00129899894786806 0.000904415245196292 0.00111820271347569 0.000166127930223925 0.000519398231687906 0.000754524599844136 0.000155787641831983 2.19175892689246e-19 0 0 2.02954993344082e-31 6.03406251921392e-06 2.39423970996031e-18 2.90309477560352e-26 0 0 0 0.00256912789470817 0.000834388222727338 3.45652625579814e-05 1.60218104933411e-41 0 0 0.00107512687583163 0.00163333592869107 0.00136132762657579 0 0 0 XM_005204960.1 TRPM8 PREDICTED: Bos taurus transient receptor potential cation channel, subfamily M, member 8 (TRPM8), transcript variant X1, mRNA. 3e-45 187 87.50 0.156020942408377 0 noncoding 0 0 0 0 -0.917622755574667 0.0412677692239108 -0.171738748832149 0.0831044131024596 CTTAAGGCAGAGCAGGTGGGGGCTGCACTGTCTTGATGGAGAACACCTGGCCGGGTGCCGCAGAGGCTGCTGGGAGCTGGGAGCAGAACACTAGCTGCTGGAGAAGCCCAGGGCCAGGCCCAGCAGGAGGTTCAAATGAGACTAAAGGTCATCAGTTTGTATCCCATGCCTTTGATTAATTTTCACTTACTCAGTGGAGACTGTTTACCCTCCTGGCAAAATACAAGGCTACTCCACTACCTTTTCAGGCCTGGGTCCCACAAGCTAACCAAAGTTTGCCAGGTAAGAGACTCCTGGGAGCCCTGGTTCCTAGAGAACCTGGCGCGCTGATCCCACAGAAAGTTCACAGGAAAACTGTCGGTCGACGGCGGTTTGCAACTGCAGTCTCAGAATGATTTTGGGGGTGCTGGGGCCCTTCACCATGGAGGCTTTGCTGGAGTTTGGAGCCCGGACCCAGCTCCACAGGCCTGGAGGACCCCGCTGCCCGAGGACCGTTAACCAGATGATGAAATTGAAACATGGTGAGGAATCTGCACCTCACAACAGCAGATCAGGTGATTCGATGGCATCACCGACTCGATGGACATGAATTTGAGTAGGCTCCGGGAGTTGGTGATGGGCAGGGAAGCCCGGCGTGCTGCAGTCCATGTGGTCGCAGAGTCGGACACAACTGAGCTACTGAACTGAACTGAGGAACCTGCCCTAGTTCACGGACCTGGTTGATAACAAAACAGTGTTTCAAATCTAGGTGTTCTTGATCTTATTAAATAATTCAAGTTTTTAGCCACATATGCTATTTTACATGTATTTTAAATCTGAATGGGAAATGGTGTTTATTTTTTCTGGTGTGGCAAATAATATTCAGAGATTGAGATCATCTTTGCTATAGGTTGTCTTTGCCATAGGTTGCCATAACATAGGGTAACTATGGGAATTAAACTAATTTCACAAGCCA TCONS_00066811 r 5' 40521 TCONS_00066811 r 5' 32131 EMBV3_41329 GGTGTTTGCCGATGTGAACCATTTCAAGAAACAACTGAGAGAAGGGTTGGAGACTCTGAG Gene GeneID:100296257|LOC100296257:XM_002689411:49_cdna Constitutive 0 NULL GeneID:100296257 7 GENE LOC100296257 NULL hypothetical protein LOC100296257 EMBV3_31420 ATCAGTGTACTGTCACCCGGACCTACCTGTTCCTTCACAAGTTCTGGTTCTTCAGTGCTG Gene GeneID:510495|LMBRD1:NM_001035092:2_cdna Constitutive 0 NULL GeneID:510495 9 GENE LMBRD1 MGC127180 LMBR1 domain containing 1 EMBV3_34394 AGCATCAGGCTTGAGCCCATGTTCCGTTAGTCTGGGCAGCCTTGTTGAGGTTTAGGACTT Gene BVT0102_279196 + 0 NULL GK000030.2:118636999-118671357 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248118 TCONS_00248129 TCONS_00248123 TCONS_00248113 TCONS_00253804 TCONS_00248117 TCONS_00248120 TCONS_00248115 3 XLOC_151489 XLOC_151495 XLOC_156742 Coding TCONS_00248120 XLOC_151489 NonCoding Coding LOC788399 X:118644045-118737994 j TSS185611 401 1 TCONS_00248120_1 48 0.316708229426434 3 0.99576361391408 0.0186252878352814 0.00823159144622712 0.0183394991445714 0.00737454833627927 0.00825981248562706 0.00350713509116118 0.00248581240224374 0.00576391213726135 0.00674286514562886 6.99346527812175e-05 0 3.19892447451253e-05 7.66980443282153e-05 0.00146424958199825 0.00076518440462765 0 0 0 0.0181350490155834 0.012343189289187 0.00365620428584272 0 0 0 0.0216631765194152 0.0199430938134618 0.0132682674592427 0 8.68087582174989e-05 0 XM_005197658.1 FBXO42 PREDICTED: Bos taurus F-box protein 42 (FBXO42), transcript variant 2e-17 93.3 67.67 0.71072319201995 0 noncoding 0 0 1 1 -0.274938970970987 0.217307289339084 -0.0354107600106919 0.489723504959708 AGAAAAGAGCTTTACTGCAAGGCTCCTGGATTGAAGAGAGGTTTGATACCTTTCCTCCTGCATTGGTTGGGCTTGCAGTAAAGCTCTTTTCTCTAAAGCTCTTGCCATAAGTATTGACTTCTCTGAGCATCAGGCTTGAGCCCATGTTCCGTTAGTCTGGGCAGCCTTGTTGAGGTTTAGGACTTGTGACCATCTGCTTGATGCACTGTAGCCCCTGGTGGGCCCTCAACAGCAACCCTGAGTGGCCACCTATACTGAGTTTGTCTAGAGAGTTGGCTCTCGGGTTCCTGTTTCCTAGCCATGGCACTCTGGGCTCCTCTGGCTTCTGGGGCTCCTTTCACTTTTAAGGAAGGAAACAGCTCCTGGATCAGACATCTTTGGGTAATTTAAAGTAAGTTGAG EMBV3_20502 ACAAATCCTAGAATGCAAATCCTAGAAGACTAGGTGGAAGACAGCCCTGCACTGTGGCCC Gene GeneID:786888|PNPLA1:NM_001099200:74_cdna UTR3_Alt 2 NULL GeneID:786888 23 GENE PNPLA1 MGC151727 patatin-like phospholipase domain containing 1 EMBV3_42782 GTTCCTAGAATCAGTCCACCTCAGTGTTTGGTGACCTCTGTGTGGAAATTTTTGTTAGTC Gene GeneID:538899|ALG2:NM_001083491:69_cdna Constitutive 0 NULL GeneID:538899 8 GENE ALG2 MGC140299 asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae) EMBV3_23995 TGTGGACACAGGGGACATCTTCGAAAGCTTCTCTTCCCATCCTCCCCTCATCCTGCCCTT Gene GeneID:505541|RASIP1:XM_002695114:597_cdna Constitutive 0 NULL GeneID:505541 18 GENE RASIP1 NULL Ras interacting protein 1 EMBV3_15725 GAACCAGATGGGGAAGGTCAACAAGCGAGACCTCGTCCGGCAGCTTTACCCGCATGAGAA Gene GeneID:509209|ACSF3:NM_001035068:162_cdna Constitutive 0 NULL GeneID:509209 18 GENE ACSF3 MGC127850 acyl-CoA synthetase family member 3 EMBV3_12571 GCCCTTGTACACGTAGACTTGATTAGTAGTTGTGGTTATCGCGGCAGAAGACATACCGCC Gene BVT0102_016880 + 0 NULL GK000001.2:21645759-21693827 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000248 1 XLOC_000069 Coding TCONS_00000248 XLOC_000069 Coding Coding NRIP1 1:21658557-21699529 o TSS127 6304 1 TCONS_00000248_4 1156 2 0.846183886163384 1.47032751109086e-32 2.10538016972702e-09 2.2625078452537e-12 5.12287646247868e-20 2.18707103828513e-37 3.77319555191407e-16 6.12263255142889e-11 1.39291484430047e-13 1.85822964056051e-08 3.31964635750668e-08 2.4485902123523e-10 1.52165178989916e-09 4.34813015703051e-05 0.000127913382145026 8.11842441684207e-05 0.000429465589194665 8.75833342818305e-05 6.57521767112463e-09 6.12496307494748e-09 3.0886887245496e-31 9.06559660433921e-13 1.51892075694534e-11 1.23527310785417e-07 5.61025042942416e-07 1.62355579233326e-08 4.0152885174481e-06 6.08970206550242e-07 8.30824420381027e-09 1.76525263096748e-05 8.55785500833771e-52 XM_005201160.1 NRIP1 PREDICTED: Bos taurus nuclear receptor interacting protein 1 (NRIP1), transcript variant X1, mRNA. 0.0 1.093e+04 100.00 0.960818527918782 XM_005261066.1 NRIP1 PREDICTED: Homo sapiens nuclear receptor interacting protein 1 (NRIP1), transcript variant X5, mRNA. 0.0 6859 84.91 0.960501269035533 TCONS_00000248_4 sp|P48552|NRIP1_HUMAN NRIP1_HUMAN Nuclear receptor-interacting protein 1; 0.0 2078 87.65 0.999134948096886 0 coding 0 0 0 0 0.0441490057360342 0.727074432386827 -0.0196622107303378 0.804750121388466 ACTCAAGCTTGGTGGAGGTTTAATCCTGTGCCCTTGTACACGTAGACTTGATTAGTAGTTGTGGTTATCGCGGCAGAAGACATACCGCCCTCCTCCTTGTATTGGTCGGGACCTGGGCATTGGGGAGTCAAGGCAAAGGAGAAAGAAAAGAGATTTTACATTAGTATTCTATGAAAGCCTTACTGTCTGCAGAACAAATTGATTGCTCCGGTGTACCTGTGCTTGGCACCACTGCTGTGAAAGAAAGAACACTGATATTTGCATTTACTGGGGAACAGAAGATGAAGGAGGAAAAGCAGTATATTCACTGAGGATTTTGTCTGCTTGCCACCTCAGCTCTGTGTGTAGAGGAATTCTGCTGCTGTTTCTTATTTGGGAGTTGCCAGCTCTGAGGTCAGACTGCGTCATAGCCTGCCTATCTTTTGTCTCATCATTGCCAGCCAGCAGTAATCCTGGTCAGAATGGAACCGTATACCTCTGTCTAATTACTGTGGAAGGTGATAAACCAACAGTCACTCACTAAAGTTAGATCTCACTCCCCTGCAGAAAACCATTCCTCAAAGTGAATAGAAACCAAGCCCTCGTGAACACTTCTATTGAACATGACTCATGGAGAAGAGCTGGGCTCTGATGTGCACCAGGATTCTATTGTTCTAACTTACCTAGAAGGATTACTAATGCATCAGGCAGCAGAGGGGTCAGGTACTGCCGTCGACAAAGCGTCTGCCGGGCGTAATGAAGACGATCAGAACTTTAACATTTCTGGTAGCGCGTTTCCCACCTGTCAGCGTAATGGTCCAGTTCTCAGCACACACACGTATCAGGGATCTGGCATGCTGCACCTCAAAAAAGCCAGACTCTTGCAGTCTTCTGAGGACTGGAACGCAGCAAAGCGGAAGAGGCTGTCTGATTCCATCGTAAATTTAAACGTAAAGAAGGAGGCTCTGCTGGCTGGCATGGCTGACAGTGCGCCTAAAGGCAAACAGGACAGCAAGGTACTGGCCTCTCTGCTTCAGTCTTTCAGCTCTAGGCTGCAGACTGTTGCCCTGTCACAACAAATCAGGCAGAGCCTCAAGGAGCAAGGATACGCCCTGAGTCATAATTCTTTAAAAGTGGAGAAAGATTTAAGGTGCTATGGGGTTGCATCAAGTCACTTAAAAACTCTGTTGAAGAAAAGCAAGGCTAAAGATCAAAAGCCCGATACCAGCATCCCTGATGTCACGAAAACCCTTATCAGAGACAGGTTCATAGAGTCACCTCATCACGTTGGGCAGAGCGGAACAAAGGTCGTGAGCGAACCCTTGTCATGTGCTGCAAGATTACAGGCTGTCGCAAGCATGGTGGAGAAAAGGGCTAGTCCTGCCACTTCACCCAAACCCAGTGTTGCCTGTAGCCAACTAGCACTACTTCTCTCCAGTGAAGCCCATTTACAGCAGTATTCTCGAGAACATGCTTTAAAGACACAAAATGCAAATCAGGCAGCAAGCGAAAGACTTGCTGCCATGGCCAGATTACAAGAAAATGGCCAGAAGGACATGGGCAGTTTCCAGCTCTCAAAAGGCATATCAGGCCATCTTAATGGTCAGGCAAGAACATCATCAAACAAACTAATGGCTAGCAAAAGTACAGCATTTCAGAATCCAGTGGGTATTGTCCCTTCTTCCCCCAAAAATGCAGGCTATAAGAACTCCCTGGAAAGAAACAATATAAAACAGGCTGCTAATAACAGTTTGCTTTTACATCTTCTTAAAAGCCAGACCATACCTAAGCCGATGAACGGACACAGTCACAGTGAGAGAGGAAGCATTTTTGAGGAGAGCAGCACACCTACGACTATTGATGACTACTCAGATCCCAATCCTAGTTTCACCGATGAGAGCAGTGGCGATGAAAGTTCTTACTTCAACTGTGTTCCCATAGACTTGTCTTGCAAACACCGGATAGAAAAACCCGAACCCGACCAGCCTGTTTCTCTGGATAACTTAACTCAGTCCTTGCTAAACACTTGGGATCCAAAAGTCCCCGAAGTTGACGTCAAAGAAGATCAAGATACCTCAAAGAATTCTAAGCTAAATTCGCACCAGAAAGTAACCCTTCTTCAGTTGCTGCTTGGCCATAAGAATGAAGAAAACATGGAAAGAAACGGCAGCCCTCAGGAAGCACACAGCGATGAGACAAAGTTCAGCACACAGAATTACACCCGGACGTCTGTAATAGAAAGCCCCAGCACCAACAGGACTACTCCCGTGAGCACTCCTCCATTGCTTGCATCCACCAAAGCCGACTCTCCCATCAACCTTTCCCAACACTCTCTGGTCATCAAATGGAATTCCCCACCATATGCCTGTGGTCCCCAGCCTGAAAAGCCAGCGAATACCGCCTCGAACCACCTGATGGACCTTACAAAAAGCAAAGAATCGCAGGGGGAGAAAGCCATCCACAATGAAGGTGCACAAAACTCGGCCACGTTCAGTGCCAGTAAACTGTTACAAAATTTAGCGCAATGTGGAATGCAGTCTTCCGTGTCAGGGGAAGAGCAGAGACCCAGTAAACAGCTGCTGAGTGTAAACACAGATAAACCTCCAGGTATGATTGATAGACTGAATAGCCCTCTGCTAGCCAATAAAACAAGTGCAGTTGAAGAGAAGAAAGCATTCGGCAGTCACACAATAGGTCCTGAACCAGGACTTTCTGGGTCTGAAATAGAAAATCTGCTTGAAAGGCGCACCGTCCTCCAGTTACTGCTGGGAAATCCCAACAAAGGGAAGACTGAAAAGAAAGAGAAGATGCCCTTAAGAGATGAGAGCACTCAGGAACATACAGATAGAGCTTTAAGTGAACAAATATTGATGGTGAAAATAAAATCTGAGCCTTGTGATGACTTGCATCCGCATGCCACGGGCACGCACTTGAGCCATGAGGCTCCGGGAGCCCCCTTCTTAGGGATGGCCCCTCCCATGCAGAGAAGTGCACCTGCCTTACCAACATCCGAGGACTTGAAACCAGAGCCTGGCTCACCTCAGGATTTTTCTTTCTCAAAGAATGGTCTGCTGAGTCGATTGCTGAGACAAAATCAGGACAGTCACCTGGCTGATGAGCTGGACAGCAGTCACAGAAATAGTGAACTGACACTTGTAGAATCGAAGAACCTTTGCATGGTCCCTAAGAAAAGGAAGCTTTACACCGAGCCGTTAGAAAACCCCTTTAAAAAGATGAAAAATAACATAGTCGATGCTGCAAACAGTCACAGTGCTCCGGAGGTGCTGTACGGGTCCTTGCTTAACCAGCAAGAGCTGAAACTTAGCAGAAGTGATCTTGAGTTTAAGCATCCTGCCAGTCATGGTTCAGCCAGCGAAAGTGAACCCAGGAATTGGACCAGAGAGAGCAAAAGCTTCAATGTCCTGAAACAGCTGCTTCTCTCAGAAAACTGTGTGAGAGATTTGTCTCAGCACAGGAGTAACTCTGTGGCTGACAGTAAAAAGAAAGGACACAGAAACAGTGTGACCAACAGCAAGCCTGAATTCAGCATTGCTTCTCTAAACGGACTGATGTGCGGTGCCACTCAGCCCGGCAGTTGCATGGTCAGCAGGACATTTCCATACCCAGGTGTCGGAAAGGCCCCCCGGAGTCCTCCTTTCCCTGAGCACTTGGGCTGCACAGGGTCTAGACCAGAAGCTGGGCTTGTGAATGGGTGTTCCATGCCCAGTGAGAAGGGACCCATTAAGTGGGTTATCACAGATGTGGACAAGAATGAGTATGAGAAAGACTCTCCGAGACTGACCAAAACTAACCCAATACTCTATTACATGCTCCAGAAAGGAGGCAGTTCTGTTACCAGTCGAGAAACACAGGACAGGGACATGTGGAGGGAGCCTTCATCTGCTGAAAGTATCTCACAGGTTACAATCAAAGAAGAGTTACTTCCTCCTGCAGAAACTAAAGCTTCTTTCTTTAATTTAAGGAGCACTTATAATAGCCATATGGGAAATAATGCTTCTCGCCCACACAGCGCAAACGGAGAAGTTTATGGACTTCTGGGAAACATGCTAACAATAAAAAAGGAATCAGAATAAAATGGACCTGCCATCCAACTTTGGATCTTTTTAAAACTAATGAACTTGAGATCTGTATAAATAAGCGCATGATTTGAGAAAAGCATGGTATAATTGAAACTTTTTCATTTTGAAAAGTATTGGTTAATGGTGATGTTTAAATATGCAGACTACTTTTTGCTTCATGTTAAATGTCATGAGGAAGCTGCTGAACTAGCAATTGGTTGGTTGACACCTTCTGTATGCATCAGACAACAACTGTGAGTAGCCCATGAATGATAATTCTTTTTTTAATCACAGATAATAGGCATAAATTAAAATATAAATCTCCATCCAGCAGATTAATGCATTGCTGCCTTTATTAGTGTACTTGATTTTGCTTTTCAGAAGCAACCTACATAACACGTTTTTTAAAGTCCACAGTATTAAATAATAACTCTTTAAAGGGTAATTATTGAATTAAAAAACCTAGTGCTGTTTCATTTCTCATTCAATTCCAAAACAAATTAGAAAAATATATGCTTACATTTTTCACTTTTGCTAAAAAGAAAATTATTTTTGACTCTTGAAAGGGGTTTTGTGATTCCTCAATGTGTCTTCCCTTCCCCAATCCTTTTCAATATTGTGTATTTCTTTAAACCTTGTACTACTTGGTAAAAATTGATTACAATTGGTGGAAGTTTGATAGATCTTAAAAAAAGGCAGATTTCCATTTTTGTATTTTAACTACTTTACTAAATTAATATTCGTCCTTTTACAGAATTAGGAAGGTTAACATTTATCTTCAGATGGTTTCCTAAATAACTGAAATAAGTTGTTTTTAACAAGCAAAATGGCTTTTCTTTGGACAGTTTTCACCATGTCTTATAAAAGCCACTTCTCACCATTTCTGTGGTACCTGTGAGTCTGACGACCAGGGTTTCTTAAAGCTGGACTCAGACCACCTGCGTTAGCACCATCCAGAGCACTTGATTTAAAATGCAGATTCCCAGGCAGCAGCTCCGACCTACCGAACAAGAATTCTCTACTGAGTGGACCTGGGAGTCTTCCTTCTGCATCTTAATACACTCCCTAGGTGTTTCTTCTGCACACTGAAATTTGGATTTTGAAAATTGAAACCACTGCTTATGACTTTTCTCAGAAAACAGGATTGTAAACAAACTATTTGATGCCTATATTTTCCCCAATATAGTCACACGTCAACTCAAAATTTGCAATATTGTACTTCATATTATTACTGTTATGTCTTTGGAAATCGGGTTCCGAATCCTTTTTATGACAAAAAAAAAAATTGGGTGGAGGGGACAACTTTCATATCTGGCTCAACATCTCAGGAAAAATATGTGATTACTTGTGTGTTCTAATGAGTAACATCTACTTAATTAGCCTTAGGGATGGAATAATAGGGCCACTTACCAAACTCAGGTGATTCCAGGATGGTTTGGCAACTCCTCCTGAATACATCCTTAACTTCTGTGAAAACCATTGTCCTAAGAACAGTGCTGACAAAGATGAAAATATATATTTCACACCCAAGAAAGGCACTAAACTCAGATTGCTTAAACAAAAAAGTAAAGGGCACATATACACGGCAGAGTTGTACACAGTCACTCCATCAGATCTGTTATTTTAAAATAGTGATTAAAAGTAAACATTGATGTTTTCTTAGAAGAACTTAATTTATTATTGAACCACATGGGGTTTCTGTCTTGAAACACATCCATGTTTTTCAGTTCATTTTTTAGCATCCACAGTTCATTCACCAGTTAGATTTGGTTTTAATTGTGAACCCAGGTAGCAACTGACCTACCAAAAAACTGTTATATAATCAACTATTAATTAGAAGGAAATCCATTTGAAATTGTTCTACTTGAAGTTGTTTCTAAGATTTTTATATTAAAAATGGGCGTTATTTCCTAATATGATCTAAAACCCTAAATGATTATTTTTTTCTCAGAATGATTTGTAAATAGTTACTGAATATATTAAAAAATAATAGGAGTGAATATTATGCTATGTCATGAAAATTCCACTGGCCAGTGAAGATATTCATCTGCATCCCATCTTTATTCTGTGACAGTCTTACTGTCTACACTATATAAGCTTTTAAACAAGTCATTTTTTTTTCCTGCCATTATGAAAGTTCTAGAGCCTTAGAAGTATGCTAGAAAAATTACCAGTGTTCCCCCTTGGTTAGGGGAAAATGGGCTTTTACAAGGGAGTGAAGTTTAGGTCAGGAAAAAGAAGATCAA TCONS_00000249 s 5' 0 TCONS_00000243 TCONS_00000246 TCONS_00000247 s 3' 12739 EMBV3_37932 GCCAGGAGTTATTTGGGACACTGCACCCTAATCTGCTCACACGAGCAACACTATCGTGAA Gene GeneID:529062|ANKRD28:XM_002685177:37_cdna Constitutive 2 NULL GeneID:529062 1 GENE ANKRD28 NULL ankyrin repeat domain 28 EMBV3_13441 GGAACCTGCTGATAAACGCAAGTATGACCATCGCATTCAGACGTTTGTTGTTATGATGCG Gene GeneID:539295|ARFGEF2:XM_002692495:602_cdna UTR3_Alt 2 NULL GeneID:539295 13 GENE ARFGEF2 NULL ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) EMBV3_18670 AACAAGGGCAAGTCAATGTTGGAGTTTCAGGAAGTGTTGGCTCATTATTCACACCGAGCC Variant GeneID:788858|LIX1L:NM_001082475:10_cdna 762^839 1 EMBV3_13212 GeneID:788858 3 GENE LIX1L NULL Lix1 homolog (mouse)-like EMBV3_13515 ATTCCCCTCTACATAGACGACACCCTCACGCGACATAGTATGCTTAAGCAACAAGATCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22225 CAAGCGTGCAATGGACCTGGTTCGAGAGGAGTTCCAGGTGGACCCAAGCGGGGAGATAAT Variant GeneID:506560|C12orf10:NM_001035038:18_cdna 681^758 4 EMBV3_24646 GeneID:506560 5 GENE C12orf10 MGC134440 MYG1 protein EMBV3_08807 TAATAAGGGAAGGAAACCACGCGCACAGTCACGACGGTCCAGGGCAACTTCATCGGTCCT Gene BVV0102_059136 - 1 EMBV3_02890 GK000024.2:45384196-45787842 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140383 1 XLOC_085117 NonCoding TCONS_00140383 XLOC_085117 NonCoding NonCoding - 24:45517283-45524171 - TSS104794 3162 2 TCONS_00140383_1 89 0.0401644528779254 4 0.541454915057354 3.60353686424169e-05 1.49845591040511e-09 6.20600946855747e-05 4.22835271588818e-05 4.89662303602413e-34 1.18511819652748e-11 8.44296656114132e-09 0 4.30118035825618e-05 7.23155418249268e-12 1.74299628686657e-12 7.33121648243867e-12 1.97657407945075e-14 9.46534948997782e-12 4.44516048268498e-43 0 0 0 2.2698718410646e-11 1.27956797601216e-11 4.6960804853651e-09 0 0 0 1.02809190383429e-08 2.3996659647321e-09 1.59099456409839e-13 3.05502501600481e-11 9.57241210334081e-17 7.44344457056616e-11 0 noncoding 0 0 0 0 -0.0390406839292908 0.765684491780775 -0.0219442491941491 0.651179020448193 CGAAAGTGAGCCGCTGTCCCTAACTCCAGCTTAGGCGGTTAATTAGATTTGGATGGTTTCAGAGGAGCAGCTGGAGTTTTCAGAAAATGGAAGCGATAAAAAAGGGGACTATTCAAGTCTAATAAGGGAAGGAAACCACGCGCACAGTCACGACGGTCCAGGGCAACTTCATCGGTCCTGCATCGAGAGGACACGAAGTGCTCCTAGAGAAGACGAGGCCTCTCATCTCGGTGACCTGACAGGAGTAACACCGTGTGCTCTTCAGAGAGGAATAACACGCAGTGACGGGTGGGAGACACTCTTTTTCAGACCAGGAAGCTGAGCCCCTATCCTTTCACCCGTTGGAGAGGAGCCCTCGCCGGTGGTCGTGGCAGGAACCCGCGCCCGGACGTTCTGCCACGTTTAGCGTCACAGACAGAAGGAGCTGGAAGCGCTTGCCTGCCGTAATTGGCTCTCTCTAGGCTGCTGCTTTGTGAGAAGAGGCGATGCTCCCTCCCCTACACACAGTGATTGCTGGCCCAAAATAGCCCTGCACCTGCTCTAAGATGCCTGAGAGATAATTTCAGCTTCCAAGGAAACTGCCCTGATTGGTGTTGATTTTTCATGACCTCCCTTCAGGCGAACACCTGGAGATAAACACCTGATCACAGAGGCGCAACCCGCAGAGCCCAGGGCAAGGAGGAGAAGTTATTTTTAATTTTTTCTTAAACTGAAGATATGCGCAATCAACTACCTTGATTGAGGAATTACATGGCCCTCACCTGCTCACCTGTGCTGATTCACCAACTTTGCTTTATCTCCAAGGAGACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGATTACTAAACCTGTATCAGCGAGCTGGGGGCTTTCTACTTTCTAGAAGTCTCGTGAGATGTGGCAGGGTCCTAGCCTTTCACCGAGGTGGAAATTGGCTTCTTCCCCAGGGATCCTGTCAGCCCCCAAACTGGTCTCTTTGGCAGCCTGAGAACATGGGCCCAGCAGCCCCTCCTCAGGACAGCAGCAGCTTCTCCTTACTCCCCCAGTGTATCCATAGCTGCAGAGGAGGTGGGGTTGAAGAAGGGGAGAACCCAGATCCACACTCTTATTTTTCCTTCCTCTTCTAATTCCAGCACATTCCCCTGTTTAGCTCTGTTTTCTTACCATGTCCTGAGAGAAGCCAAAAAATACTGTGTCCCAAGCCACTTCCTCAGGAAAGAAGTTCTGAGATGGAGAGGAGAGTCAACCTGTCCATCCTGACCTGACCCCCAGCTGCTCCTCTAGGCTCCTGACTGTAGCATTCCCTTTCCTCACACCTGCAGCCCCAGCCTCCCCAACAGCCTGAACTATAGCCCCTGCATTTCTAGAACTGAGCAAATAACCAAAATCCATAGACTGGTGAGGGCTTCCCCATTGTTCCCTTTCTGCGTTCCAGGGCTTGGTGTGCTGTCATGGTCCAGCTGATGGCCAGGCCCCAGGCCCTGTCCTGCCAGGCTGATGGCTTTTGGCACCTGGCCCCAGGACCGGCCCTGACCTCTGCTTTCTAAACCTGAATGGCTAATCGTCTCAGTCATTTAGGGAACTTTAAAAAACATTTGCCCCAGACACCATGTGGAGATTCTCATTCAGTAGGTCTGTAATTTTGTTCAGGTTCTCAGGCTAATTCTAGTGCAGCCAGTCAGGTTTGAAGACCTTGAATCCAGACCCCTCACTTAACTGCTCTCAATTCATCTCTCAGTCTCTTTGCACCCAGACATTTTCTTTCCTCTGGCTACAGCCTTGGGGACAGGCAGCTTTCTGATCTCAAATTTGATCACTTTCCATATCCATAAGTGGTATACTATCACACTCTAGAGAATTTCTATAAATGGGATAAAAGTCTGTTGAATGGACTTTTCTGTTTAACCAGCCACGCTATACGTGACGATTGCTAAGAATATAATAATTGCAGTCATAATAGTCACCTGTAATAGGAAACAAAGCTGTTCCATACTCATTTAGTCTTAATAAAAGCTATAAAATCCACCAGTGTCATTATGTATTTTTAAACGGAGAAGACTTGGAGAAGAGAAGCGACACATGCAAGGACCTGCTCATCCTATTTTTCTGGGCGTTTTCAGTGCTGAAGATCATGGCATACTAAGCACGGAGCCCACAGAATCCTCTGACATGTCCACAGAGCCCTCACCACCTTCTGTCCAAGCCATCACAAACCCCTTTGGATGCTCACAACAGTCCCAGATGACTCCCTGTCCCAGCTATAGGCAGTCTCCACCTTGTCATCCACTCTGGCTCCTGCAGTCAGCTCCTCTCTAGCACCCTGGTTGGTGTTTACCTGTCTTGGGTCTCCTTTGTTTTCGCTGTGTTGGTTGTACTGTTCCCTGGCAGCCCAGCCTGGCCAACTCACTGGTCAGCCCGCTAGAACCCTGGGATGGAGTAGGAGCATTCAGACAATAATGCTTAGAGGTTTGGGGCTCAGGTCTGTCTGAAGCCAGGTAAACCTTGTGGAGGCCTTGACTGTGTGAGCTTGGCTTAGGAGTTTTTATTTGTATCCAAAAATACCTTCCCTCTCTATCCAACACTGGCAGCTAATAAAAAGATGGTCTCGTACTCCTGTGTGAGATTTGGATCACTGTCAGTATCATAAAAGCTGTCCTCCATTGAAGACCTACTGTGTTCCAGGCCCTGGGCTTTCTGCAAGGAAGGGGCCTGATCCTGTATAGGCCAGAGCATTTGGACTCGAGATTAATACAGAAATCCAGGAGCTTCTCTGCTCCAGACCACAGAGCTGGGAGGAAAGGAGCCTTGTCTCCACTCCACGTCTCAAAGGCAGGTCAGCCGCAAGTGTTTCTTCCATTATATGGTCTTTCTTCAGTTCCATTAATACATGGTCCGTTTAAGATAGTGTACATAAAAAAAGAGGAAGAAACACCGTGGGAGTGATCAATCACCAGCATTCTTAAGTGAAATTTTTCAGTTGATGCTTCCCAGTACACTCAGCTGAAAATCCTTTGGAGTTTTGAGAGAGGCAAACCAGAGGTAATTGGGAGGTTGTGATAACTTTGTAGATCAGCAAACCCAGTAGAGCTCACAGACAGAGGTGACTTGGTGGGCCGCATGCCATACTGATTTCTGAAAATTTCATCC TCONS_00140388 s 3' 214931 TCONS_00140388 s 3' 210524 EMBV3_14465 CAACATTAGGAACGAAGAACGGGTGAAATGTCCTAGACATCCACTAATCAACTTCCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11039 AGGAAACCAAATACTCTCTCAAGGCAGTTGAAGACATGTTGGAAACACTGCAGATCACCC Gene GeneID:616813|TTC35:NM_001080327:56_cdna Constitutive 0 NULL GeneID:616813 14 GENE TTC35 KIAA0103 MGC128301 tetratricopeptide repeat domain 35 EMBV3_33124 GCAGGGACTGGATCCTCCACTGGAAATGTTGAAGGTTATCTCCGGAAGTGTCTTCCATGA Gene BVT0102_343465 - 1 EMBV3_00846 GK000010.2:93965131-94557842 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015459 TCONS_00015435 1 XLOC_008488 NonCoding TCONS_00015459 XLOC_008488 NonCoding NonCoding - 10:94334367-94341909 - TSS10902 1030 1 TCONS_00015459_1 97 0.102912621359223 2 0.863678557220528 0.0001343161179933 8.36558082099789e-05 3.86059672585779e-23 4.1833906785862e-05 7.05366393170008e-05 1.48661066440759e-05 2.7234319876031e-05 1.933703341278e-05 0 0.000299565886618603 6.29964993516134e-06 0 5.97419357712463e-06 0.000479358677513518 0.000129504277150277 0 0.000103134549967579 0 7.23110456517044e-06 0 0.000163105914700744 0 0 0 6.01595008542565e-06 0.000281572203522209 1.20977237088987e-05 0 2.58815896768558e-14 8.40643984519656e-41 XR_232768.1 LOC101906873 PREDICTED: Bos taurus uncharacterized LOC101906873 (LOC101906873), 4e-06 57.2 72.55 0.0951456310679612 0 noncoding 1 1 1 1 -0.173171798094209 0.232213615604215 -0.0149756990316974 0.749916859298778 GCAGAAGCCTAGCTGTTTGGCACTGGGAACCCTGGTCTGAAGCACCGAGTTCAAGGCCTCTGCCTGCTGCACCCTACGAGCAGGTGAAACTAGACTGAGCTCCAAGGAAAACTAAAGACAGGACTTGACAAGTCATCTGTTCATGGAAGACACTTCCGGAGATAACCTTCAACATTTCCAGTGGAGGATCCAGTCCCTGCAGGAAGTGCCTTGCAGAACCTCGGCATGCTTATTAAAGAGCAAATGTTCTGAGAGAGCAGGAAATGGCTTCTCTCTCCTTTTCCAGTCATGTGTACCCTCTGGGGCACACCTGCTCCACTCCCATGCCGCCTGTTGCTTCTGTGGGGTTGACAGTGGTGGGGGTGGTGTGCAGAGTTTTATTTACTTTGTTACATTATTTACGTTTTCGGATTATTCCTGGGATGAATTGCTATGAAGCCCACATTTACTTAGCATAAACTTCGGTAACAGCTTAATAGAAATTAAATTTCAAGTCATCTCTCTTTGAGAAATATTAGGATTTATTAGTGGGTCCCCCCAAAAACTAATTCATCTGCATGGATACATTTCAGCCTTAAGTAATGGAGGAAACTTTGTGTGCTATTGTCTGTAATTATATTCAGCACATTCCCTTCTTCCCCTCTCCCCTTTCTGTATCCTCTGATGATTAGCCTGGTGGGAGAAGCCTTGTCTTTGCCCAAGGCCTTAGGAAAGCAGTAATGGTCCCCAAGAGAGAAATTGGCTGTACTGAGAGATAAAGGAGGGAAAGGAGGAAGAGAGTGAAAATAAGGAAATGGTCAGGTCACAGCCCATGACTTATAAAAACATGTTGAAGCGAAAAGAAATGAACATGTTAAATCTAAGAAGTATGAAATGGCTTTCTCATGAATCTCTAAATGGCTGAAAGAAACCGCACAGTAGTTAAGCATCCCTGCTTGTGCTGTGGGCCAGGAAAAAGACGGTGCGTGCTCTGTGCTGTGGCCAAATCAGTCTCCTAGAAGAACAGCTTGATCATGTCATTCCTGTGCTC TCONS_00018491 TCONS_00018492 TCONS_00018493 r 5' 369232 TCONS_00018491 TCONS_00018492 TCONS_00018493 r 5' 369232 EMBV3_34088 TTTCAAGATCTCTGGTGCCTCTGCTTTGGTGATAGCTCTTTAATGAAAGTAGCACCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00624 GTAAATAGCGGCCGTGGGGGTCAAGTGGTTACGTGTTCAAGACTCTAGCACAGAAGACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38203 GTCTCCAAGACTTCCACACATTCAAATTTTTCACATCAAATGTGGTGATCCAGGGGTCAG Gene BVT0102_118111 + 0 NULL GK000005.2:28331405-28470129 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23487 CTCCAGCAGAGGCTGCTGTTGCATATAAAGAGAAACACTGTGTTAAATGGATGTCTTCTG Gene GeneID:527412|TTC21B:NM_001102108:103_cdna Constitutive 0 NULL GeneID:527412 2 GENE TTC21B MGC166109 tetratricopeptide repeat domain 21B EMBV3_23035 TGTAGTGGACAAAATACGAGAAAACCGTGGGCTGGACACCCTCAAAGTGACCGTGGGTGT Gene GeneID:788926|HK2:XM_002691189:104_cdna UTR3_Alt 2 NULL GeneID:788926 11 GENE HK2 NULL hexokinase 2 EMBV3_11801 TAGGTTCCACGCTCACCATGCTCCTGCCTCTCTGTGGGAACAATCGCATTGACCACTTTT Gene GeneID:613390|LOC613390:XM_002689069:73_cdna Constitutive 0 NULL GeneID:613390 7 GENE LOC613390 NULL similar to olfactory receptor, family 2, subfamily C, member 3 EMBV3_08686 CACGAGAAGCGAGTGAAGCTGCAGATTTGGGGTTTGACTTCTTTGAAGCCAGTGCCAAGG Variant GeneID:282030|RAB3B:NM_174447:7_cdna 316^559 1 EMBV3_18447 GeneID:282030 3 GENE RAB3B MGC152076 RAB3B, member RAS oncogene family EMBV3_04355 GGCAGGTGCTAGATGTTTAGACCACAGTTTTCCAGCCTTGGCACTGTTGATGTTTTGGGC Gene GeneID:768224|DPH2:NM_001078099:328_cdna Constitutive 0 NULL GeneID:768224 3 GENE DPH2 MGC143119 DPH2 homolog (S. cerevisiae) EMBV3_23905 CGCACCAGGTCTTGTAGCAGCGCCTCCTCGAGGGAAGTCTCAGGTTGCCCTGAAGATCAT Variant GeneID:505499|CLK3:NM_001034248:43_cdna 443^606 3 EMBV3_02855 GeneID:505499 21 GENE CLK3 MGC128892 CDC-like kinase 3 EMBV3_34262 ATGTTTATCAAGGTGATGTTCGGAGCCAGCTGCTGGGAGCTGGTGAACACCTGGTGTGGC Gene GeneID:100296711|LOC100296711:XM_002694691:282_cdna Constitutive 0 NULL GeneID:100296711 17 GENE LOC100296711 NULL hypothetical protein LOC100296711 EMBV3_37445 GCAGTCTATTTTAAAAAGGCCTCCAGGGGATTCTGATGCATGCTAAGTTCAGAACAGTGC Gene GeneID:508522|GPN1:NM_001083392:81_cdna Constitutive 0 NULL GeneID:508522 11 GENE GPN1 MGC137872 XAB1 GPN-loop GTPase 1 EMBV3_06164 TTTGTGCCCAACGGCTGGAACCAATGGAACTTTGTGCCTCTGTAAAGCTGCCCTGAACAC Gene GeneID:518623|MGC179454:NM_001102048:11_cdna Constitutive 0 NULL GeneID:518623 15 GENE MGC179454 NULL similar to glycine-N-acyltransferase EMBV3_28776 GCCAGCGTGCCCCTGACCAACTACCTGGATGTCTCCAACATTGTGGACATCCAGCAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40483 CGTGATGACTATCCATCAAGAGGCTATAGTGATAGAGATGGCTATGGTCGTGATCGTGAC Gene GeneID:509591|RBMX:XM_002699591:89_cdna UTR3_Alt 2 NULL GeneID:509591 X GENE RBMX NULL RNA binding motif protein, X-linked EMBV3_14874 CACATGTATGTGATAAAGGACCTTGTTCCTGACGGGCTCTATGAGTGTATCCTCTGCGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43779 GTACCACCTTTGGTTAAAAGACAAAAGAAGACGTTGGGGGAGTGGTTCAGCACTTCAGAG Gene BVT0102_185982 + 0 NULL GK000004.2:66156435-66204845 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14892 CGGCGGCTCTTCGGGGTGCTCGGCTCCCTCCCATGGAGCCCAATGATAGTACCAGTACCA Variant GeneID:508605|BAT3:NM_001075366:78_cdna 71^275 1 EMBV3_01711 GeneID:508605 23 GENE BAT3 NULL HLA-B associated transcript 3 EMBV3_37106 CTGCATAGTAGCCTACAGATGATTTGAGCTCATTTACACATATTTTTGCCCCCCAAAACA Gene GeneID:281749|EDNRA:NM_174308:56_cdna Constitutive 2 NULL GeneID:281749 17 GENE EDNRA NULL endothelin receptor type A EMBV3_14375 AATGGCTTGAAAGTGGTCGTTGAGGAGCTGCTGGCCAAAGGGGCTTGTGTACTTGCTGTA Gene GeneID:526800|ANKRD44:XR_083600:188_cdna Constitutive 0 NULL GeneID:526800 2 PSEUDO ANKRD44 NULL similar to mCG117548 EMBV3_30046 GTATCTGCATTCTTCCTGATACCATCTGGTGACTTTCCACCCCCACACCTGGAGGACAAT Gene GeneID:783813|DPPA4:XM_002684742:190_cdna Constitutive 0 NULL GeneID:783813 1 GENE DPPA4 NULL developmental pluripotency associated 4 EMBV3_24875 GGGGGGAGGGAGAGTTTTGTCTAATCCTTCCTTTTTTCTTATCTCGTCTTGCTGCCTCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20691 TAAGGACACTTAATGGGGTACCAGTCACTTGCTGCAGTCTCGCCTTTTGGCAGTCACCCA Gene GeneID:532798|LOC532798:XM_002698761:14_cdna UTR3_Alt 2 NULL GeneID:532798 28 GENE LOC532798 NULL similar to Uncharacterized protein C1orf96 EMBV3_12217 AACACTTCAGGTCTAGATAGGGAAAGGTTCTCAAAGAAGCTGACCTGCCCAGCACAGGCT Gene BVT0102_010153 + 0 NULL GK000016.2:13774630-15044015 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071341 1 XLOC_043112 NonCoding TCONS_00071341 XLOC_043112 NonCoding NonCoding - 16:14698409-14698804 - TSS53185 395 2 TCONS_00071341_1 39 0.906329113924051 1 0 6.88895024818645e-05 0.000483342159234093 0 0 0 0 0 0 0 0 0 0 0 0 3.72622694461994e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.338815333525238 0.155083031190478 0.00403600241131957 0.931153014241106 GTTGCCCCACTGGGTGGTTTGTAGGTAAGGGGGATCAACAAGAAAGACACGGTCCCCACAGCCACTGGATGGTACAATATTTTACTCACATAGAGAAGACAGGGCAAAGTCAGCCCTGAACCATGGGATCTTCCTGGAAGCTGATGCAGGGAGTGACCAGCACCTTCTATGCTGCAAGAGAAGGACCCGGTTCCCACCCTACTCAAACAGATGAACTTGTAGGTTTGTACCATATAATGTAGAAGGATTGAGCAGAATGAGGAAGAACACTTCAGGTCTAGATAGGGAAAGGTTCTCAAAGAAGCTGACCTGCCCAGCACAGGCTGTGAAGACTCTTTATCCCCAGGTAGGAAAATGTTCTTGATCCAAAGCTTACTCTTATGAAGTTGTGCAAG TCONS_00068704 . 5' 923781 TCONS_00068704 . 5' 923781 EMBV3_02663 GAAGAGGGTTTTCTCAATAAAGAGGTGGGGAGGAGCCAAATGAGCATCACCTGCCATAGG Gene BVV0102_268865 + 1 EMBV3_05154 GK000004.2:114584303-114587368 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182926 1 XLOC_111027 NonCoding TCONS_00182926 XLOC_111027 NonCoding NonCoding - 4:114585963-114586606 - TSS136628 521 1 TCONS_00182926_1 74 2 0.191588785046729 0 0.000694326000534171 0 0 2.84290013099165e-05 0.000460005518745211 0 0 6.05768469368368e-05 0 0 0 0 0 0.000357841788606671 0 0 0.00062606854011756 0.000192692949582041 0 0 0 0 0 0 5.40918295364561e-05 0 1.84360666922996e-05 0 0 NM_007189.2 GCN20 Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 2 8e-18 95.1 69.33 0.44721689059501 0 noncoding 0 0 0 0 0.0130915548859043 0.929517364852593 -0.0249421190087327 0.685973521729257 CTGTGAGAAGAGGGTTTTCTCAATAAAGAGGTGGGGAGGAGCCAAATGAGCATCACCTGCCATAGGCGCCTGAGCACCCTCCACCGCACCAAGCCCACACGCCCCCAGTTCCCACCATTCAGCTGCAGCTGCGTGCCGGGGGTTGGAGGAGCAGGAGGGCGACTCTGGATCCAAGATAAGGCCTGGAGACCCCTTCCCCCTGTCCTGGAGATCCCAACAGACTTCAGTGGGAGTTCTTCACACAACCAGGCCCTCCCTTGGCCAAAGTAGCAGCTCGTCTCTGTTCTCATTATCCTCCTAACCAAGCCTCTGGACACTCAGGACAGACTGACGAGCCATTTTTCTCCGGGTTCCTGCCGTGAGGCACAAAGCAACCAGGCCAGGCCCCTGGGGGTCAGAGGGTGGAGTCCCTCACTCCAGCCTTGGGATCCAGGGCTCAGCTGCAGGCACTCACCTGATACCCTATTCCCTCTGCCCAGGGCAGCTCTGGGACTCCACAGCCATCTGAGAAGACCCTACTC TCONS_00185404 TCONS_00185405 TCONS_00185406 TCONS_00185407 r 3' 362 TCONS_00185404 TCONS_00185405 TCONS_00185406 TCONS_00185407 r 3' 1004 EMBV3_08990 AGTGCACCAGCCCCACGCATCCTGTATTCTGCATCGAACTTGGACTGGCGATTCGTTTCA Gene GeneID:788507|GPR65:NM_001101303:147_cdna Constitutive 0 NULL GeneID:788507 10 GENE GPR65 NULL G protein-coupled receptor 65 EMBV3_10315 AGCTTGGGGTCAGAACAGAGATGAGAAACCAGAGGAGAAAGGAAACTCCCCCTTGGGCAT Gene GeneID:532108|LOC532108:XM_002685660:417_cdna Constitutive 0 NULL GeneID:532108 2 GENE LOC532108 NULL similar to ornithine decarboxylase 1 EMBV3_29866 TTCCATCATGGGACTCTGCATCATCTCCATCGACCGCTACATCGGCGTGAGCTATCCTCT Gene GeneID:282134|ADRA1A:NM_174498:2_cdna Constitutive 0 NULL GeneID:282134 8 GENE ADRA1A NULL adrenergic, alpha-1A-, receptor EMBV3_12280 GAATGAAAGCTTCACACACACCATGAAAACTTCAGTCCCACCATGCTCAAGGGCTCTGTG Gene BVV0102_284449 + 1 EMBV3_24747 GK000012.2:32357228-32437632 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23868 GGCTCCTACAAGTGCATCAAGTGCAGCAAGGAACGGAGCTTTGACTGTAAGATCTGTGGC Variant GeneID:100139952|GFI1:XM_002686242:280_cdna 847^984 1 EMBV3_25448 GeneID:100139952 3 GENE GFI1 NULL growth factor independent 1 transcription repressor EMBV3_36427 GAGTTCGCACAGAAACACGAAGAATAGGTGGTGCAGACTTTCTAGTTTGGCGGTGGATCC Gene GeneID:530659|LEMD3:XM_002687649:828_cdna UTR3_Alt 3 NULL GeneID:530659 5 GENE LEMD3 NULL LEM domain containing 3 EMBV3_27017 GAGATGAACTCTCTGGCCTACTCTAACCTGGGGGTGAAAGATCGCAAAGCGGTGGCCATC Gene GeneID:282182|CITED1:NM_174518:5_cdna Constitutive 1 NULL GeneID:282182 X GENE CITED1 NULL Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 EMBV3_26187 GAGTTCTGCCTCACTTGTGTGGTCTCGCATTTTGGGTGCCAGGCTACATGTTGGAACCAA Gene GeneID:514287|MS4A18:NM_001101992:161_cdna Constitutive 1 NULL GeneID:514287 29 GENE MS4A18 MGC148303 membrane-spanning 4-domains, subfamily A, member 18 EMBV3_43191 CCCAGCTAAGTCAGGAAAAAGTCAAATATCCCAGAGAAGCTGTGATTATGCCAGGGGCTC Gene BVT0102_254763 + 0 NULL GK000003.2:87961538-88032551 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170508 TCONS_00170507 TCONS_00170509 TCONS_00170505 TCONS_00170511 TCONS_00170510 TCONS_00170506 TCONS_00170513 TCONS_00170512 1 XLOC_103600 Coding TCONS_00170512 XLOC_103600 Coding Coding MYSM1 3:87924697-87966272 = TSS127390 7254 1 TCONS_00170512_3 831 0.062172594430659 20 0.825997017366623 0.00096446864013876 5.40897878167924e-10 0.000910860071160315 0.000237805591679069 0.000878369236476769 0.000120587626938823 0.000593169855897851 0.000565203192008997 0.000709878232301549 9.6738490545351e-06 2.82278795272035e-05 3.11793824266928e-08 0.000116188975707253 3.13325425730319e-05 9.28114294706147e-07 0.00265829025953813 0.00107094079955469 0.00175160554682565 0.000482010794619417 0.000573202320500145 1.54192664438293e-05 0.00117666582369059 0.000978871322344387 0.00139173671558912 0.00140981013416933 0.00136337720904955 0.000474058368959151 0.000183846550988814 1.28447604066427e-06 3.0829366322886e-07 NM_001192408.1 MYSM1 Bos taurus Myb-like, SWIRM and MPN domains 1 (MYSM1), mRNA. 0.0 1.308e+04 100.00 0.999862145023435 NM_001085487.2 MYSM1 Homo sapiens Myb-like, SWIRM and MPN domains 1 (MYSM1), mRNA. 0.0 3790 83.07 0.498207885304659 TCONS_00170512_3 sp|Q5VVJ2|MYSM1_HUMAN MYSM1_HUMAN Histone H2A deubiquitinase MYSM1; 0.0 1432 86.83 0.998796630565584 4 coding 0 0 1 1 -0.0427158868038284 0.690986676679048 0.0461880868640823 0.371180668052475 GACGGCTGGGGTCAGGTCCCATCATGGCGGCTGAAGAGGCGGATGTGGATATCGAAGGGGACATAGTGCCAGCGGCGGCACAGTCTGGAAGTGATGAAAATACAGCATCTGTTTTACAAGATCATTATCTTGATTCATCATGGAGAACTGAGAATGGTCTTATTCCTTGGACTCTGGATAGCACCATCAGTGAAGAGAACAGAGCTGTCATTGAGAAAATGTTGTTGGAAGAAGAGTATTACTTATCCAATAAGTCACTTCCAGGAAAATTCTGGCTTGATCAAAAGGAAGATGATAAAAAATACTTGAAGAGTCTGCAGAAAACAGCAAAAATCATGGTACACACTCCTACAAAACCAGCCAGTTACTCAGTAAAGTGGACGATAGAAGAAAAAGAGCTGTTTGAACAAGGGCTGGCTAAATTTGGCCGAAGGTGGACCAAAATTGCAAAGCTAATTGAAAGTCGCACTGTTTTACAAGTGAAGAGTTATGCGAGACAGTACTTTAAAAATAAGGTAAAATTAGATGGTCCAGAAAAGGAAACACCAAATCAGAAGAATAGCAGTGGCTTCCAGATGAAAAATGAAGATGAAGGGACAAAGGCATGGACACCATCAGGTTTAAGGGGACGTGCTGATCCCAACCTGAATGCTGTGAAAATTGAAAAGTTATCCGATGATGAAGAAGTAGACATCACAGATGAGACTGATGAGTTGACTTCTCAAGTTCCCCAAAAGGATCTTAGCAGTGTTCTCTTGTTAGACATCTCTAATAATAAAAGACCTGAAACCATTAAAGCAGTAGTTTCTGACAGCCAAGAAGATCCCATTTCTAAATCTTCCAAGGAGTATCTTCAGAATATAAAGCAAGGTGAGATGGAAGCACTTTCAAGCTCAGGAATTAGACTTTGGACTGAAAATTACAATACCAGTGACCAAAAATTAGTTGAATTAAATGATCAGAAATGTGATAAGCTGATGAAGAACTGTGATAAACATCATGGGAATGGAATAACAGATGATGCCAGACAGTTGCCTTCTCCAGAGCCTTGTGAAGTTCAGAAAGACTTGAGTGATAATGAATTGCTTTTTCATTCCTCCTGCCAAATGGAGGAGGAGAGCCAAGAGGAAGAAGAGCTTAAGCCACCAGAACAAGAAATAGAAGTGGATAGAAATATCATTCAAGAAGAAGAAAAACAAGCAATTCCTGAGTTTTTTGAGGGGCGCCAAGCTAAAACACCAGAACGCTATTTGAAAATTAGAAATTATATTTTGGATCAGTGGGAGATATGCAAACCGAAATACTTAAATAAGACCTCAGTACGTCCTGGCCTGAAGAACTGTGGGGATGTTAATTGTATTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAACAGGCTGTATATAACAGGCCACAACCAGTTGACAAAGTACGAATCAGAGACAGAAAAGACACAGTAGAAGCATACCAGCTTGCCCAGCGCCTGCAGTCTATGCGCACAAGGAGACGCAGAGTCCGAGACCCTTGGGGAAATTGGTGTGATGCAAGAGATTTGGAAGGGCAGACATTTGAGCATCTCTCTGCTGAGGAGTTGGCAAGAAGAAGAGAAGAGGAAAAATGCAAACTTAGTAAACCTTCAAAAGTACCAAGACCAACAAAAAGCTCATTTGATCCCTTCCAACTGATACCTTGTAATTTTTTCAGTGAAGAAAAGCAGGAGCCATTTCAGGTGAAAGTAGCTTCAGAAGCACTTTTAATAATGGATTTGCATGCTCATGTTTCTATGGCAGAAGTGATTGGTCTGTTAGGAGGAAGATATTCAGAAGCTGATAAAATAGTTGAGGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTGCAGTGTGAGATGGATCCTGTCTCACAGACACAAGCCTCGGAAACCTTGGCTGTCAGGGGCTATAGTGTTATTGGATGGTATCATTCTCACCCTGCCTTTGACCCTAATCCATCCTTACGAGATATTGACACTCAAGCCAAATACCAGAGTTACTTCTCCAGAGGCGGTGCAAAGTTCATTGGGATGATTGTTAGTCCTTATAATCGAAATAATCCTTTACCTTATTCTCAGATTACCTGCCTGGTTATAAGTGATGAAATTAGCCCAGATGGCTCTTATCGTTTACCTTATAAATTTGAAGTACAACAGATGTTAGAAGAACCTCGTTGGGAGTTAGTGTTTGAAAAGACAAGATGGATAATAGAAAAATACAGGCTATCCCGGAGCAGTGTCCCCATGGATAAAATCTTTCGCCGAGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTCTGAGGAAAACTCTGAGCAAAGTGACCAATTGCTTCATTGCTGAAGAATTCTTGACTCAAATAGAAAATTTATTCCTTTCCAGTTACCAAAGCAATCCAGAGAATGGAGTGGCTGAAGAGAACTGTACTGTGGGGCAAAAGGAATTGTTAATGTAATTATCTTAAAGTAAGATATTTTAATCTTGACACGGTAGATCCTACTTTGAGAGTTATAACCTTGAAATTATTGTTTAACTGTGGTACAGCTTTGACTTTTTTGCTAGTTCATGAAATCCAAACTTCACCACATACACCATCTGGCAAGAAAGAGAGCTGGACTTGTTTTCATATGTGGTACTCAGAGTGTTGTGTGAAGTGGGGTCGGCCTGCAGGTGCAGTCTTCCACGGCCAGTCAGGGCGTGAACTGGAGGGTGGCCTCCCTGCTGTCTTCAGGTTGATGAATGGATTGTGTCTCGAATTTTTGCTTCCCCTGAACTAGTCATTCCAGTTTTGCTGTCTCGTGTCTCATTAGGAGCACCTCTGTTCTCTTCATGTGTTTTTTTGAGGCTTGTTTATGGTTGCAGATGAGATGCGGGTGGGTGGTCACTGAAATAATGAACATGGTTGAGAACTGCTGGTTTAATGAATCTAACAGCATGCTATGCGAGGCCAGGGGAGGCCTGGAGAAGAGACCTAAAGGAGAGAATCAAATGACCAGCTGTTTAATTACAGATATTTGCTTCCATTTTACTTTATAACTGCACTGCTATAGGATGTGCCATTTTATCAGCTGTAGCATTTTGTCAGGCTTTGAGATACATAATATAAGGAGCTTCAGCTATAGGTGCCACTTAACTAGTGTTTGTGATAAAACTCAGTTAACTAGAACACAGGTAATCATAACAAACTAGATTTTTTATTTTTCCTCTTCCTACCTGCTATGAGGAGAAAGAGGCAAATTACAATAAAGCTTAAATAAATCAGATTTGATTTTAAAAACAAAAAATCCTTCCAGGACATATTATGTATTGAGCCCAGTTCTGTATACTTGCTGAATCCAGAACAGGGGTCAGTGGACCTTTTGTGTAAAGGGGAAGTTAATAACTTAGGCTTGGCAGACTGCATACCATCTCTGTCGATCATTCTTCTTTATATTTTTTAACAGCTCTTTCAAAATGTAAAACCATTTTTAATTCATGAGCCCCATAAAAGACAGGTTGCTGGCTGTTGTCTTCCAAACCCTGCTCCAGAGGATTGCAAATATTTAGAATTTATTTTCAAGTGCATGAGCCTGAGCCACTGAAAGGTCTTGCATCATCTTCATCAGTTCTATTGCATCTAATCTGTGTATGATCTGTAATTAATATCCAAGGAAAATAAGTCAGTGTTGGAAGGAGCAGTGAGCCAGTTTTAGATGATCTGGGTCTTGACTCAGTCTTGTGAATTGGGGGAATATAGTCTACCTTCTCTGGGCCTAAATTCATGTTTAACTGAGGTCTACATTATCTTCCCTGTGTCCTACGAGGTCTAAAATCTTGTAATTCACTCTAATCGTTGGACTTATTCACCTGGAGGTTATATTTTGAGATGGTACAGTCCCAAAGTTAATTTTAAGTGTTTTTTAAGGAAAGTGGCAGTATTTTCCGTTTTTCTACATTCATTTAGGATAAACAGTGAAACATAACTTACAAAGCAGTTACTGTGGGGACCAGGGATATTAGAACTGTAGACCAAAAATAGGAAACCTGAGTTCTTACCCGAATTCTCTTACCAGCTTTGTTATGTGACAATCACATAACCTTCTGTATGTCAGGCTCCTCACCTGTAATTCAAGGGCAGAAAGTATGCTTCTGTAAAAGGTAGTGGTTCATTCCTTTGTACTCTTCCTTCTGACATGTTTTCTTCATTATACCTCAGGAACAGACCCTAGAAAGTGGTATTAATTAGCTTTCTTAATTGACATTTCCCTGTTATATTGATGGATTGGGGTTGGAAGATAGTGAAAATTAAGAATTCTGTTCTCAGTCTGGGTCTTCTGCCTGCTTGTGGGTTACTACATTTAGTAACCTAAGCCATACTATGAGGAGCTCAAACATGGTACTGTTCAGAGTTTAGTGCTTTTGGAGCATAGTTTTTTTAAGTAATACTTCCTGACTTTTTTTTTTGATAATAGAGTACATTTATCCTTTTAGAAGATAATTTTTAAAAAACAGAAACCATATTTAACATTGTAGTATAAACCTTTCATTTTTTTTAACATCATGTAATTTTGAATACAGTCTGTGATATTTTCCTCCCCTCCTCCCTCATTCATTCCTTTATATTTTTCTTATGATAGTCTTAAAACATTTTTGCAGCTCTTGGTGCCCACATTCCTATCACTGCCAACCTTGGCCTGCTGAGGGCAGTAGGAATCAAGCCTTGAGAAGCACGGGAAGTCTCGGACTGAGTGGCAGTGTGGGAGTTTAAGAGGCAGGGTCTCAGAGGGAAGCCTACCTCTAGCAATGTTTACAGAGTGGAGATAGGACCTGAAAACATCAGAGTCTCTTCGTCCTGATTTGGTCCTTACTTTTGTGCAATGACAATAAAATAAGGAGCTTCGTTTTGTTTTATTTTTTTTCTTTTTCCAGCTTGCCTACTGGAAATTGACATTATGATTACTTCACTAGTATTAGCTCTCTTTTAGTCTCATCCCAAAGTAATATTCAAAAAAAGAAAAATCAGTGGAATAAGATTCGCAAGACCAGAGGCTGCCCCTGGGTCATTTCAGCCTTGGCCCATCGGCCCTCAGTGCTGCACTGTAGCTTCCGTGGGCCTTAGACACTTTGGCCTTTTTGACCCTCTTCTTCCACAGAAAAACTACTAAAAATCAATGTTACAACTGCATTTGTATAAAATGAATTTAATATTGTATATGCATACATCCTCCCATCTGAAAGTGTTTTTTGTGTTATAAATTTAAAAGAAATTAAAACATTTGGGAGGGCCTCTAAATGTATTATAAACATGAGACCTGGTGCCTAATAGCTCAGTTGGCCCTGCCTATATTCTGTTACCCCTCCCCTATAAACTGACCTCACAAACCCTAGCGGAGCTTTGCCACACAGCCAAAAACACTGCAGTTCCTGTGGCTTTAGATCCATAGACATGAGCTTTGGTCTTGACTGACTCCACCAACATTCAGGACTTAGTTGGAACCATTCATCCCCCAAAGAAAGATGGGCTGAAGTGGCTAATTTTAGTTTTCAGGTGGATATTTTGTTCTGACTCTTATTACGAGTCACGGCTCCTGCCACCCTTTCTTCCTGCATTTCCCTCAAGCTCTTTTTTCATCCCCACTCCCTCAGTTGTCACCTGTCGGTGTGTAGCTATGAGATCCGCCATTGTCACGTGTTGAAAGCAAGGCCTGGAGAATGGAGTTGAACAGAAGCATTCTTGTTTGCCAGAAGCTGACTAAAGCTGCCCCAGCCTTCTCTCCGTAACTTTCCTCCCCCCCAGGAGTGGGGCAAGGGCTGTGACGCACAGGTTGTTTGGGCAGCGAGGAGACTGTGGGCTCGGCATGCCACCCTGAGTGGGCCTCCTGCTCTTCAGTTCACCTTCTTCCTGTTTATCTTGCTGGGTCCTCATGAGCTGAGCTGGAGAACCTGGAGAAGCCAGTACAGGCAGGAGGCCCTAGGACTGATGCTCTGTCGCGTCCCTACACAACCCGGAAGGTAGCTACCGTCTCAGGACCCCAGCTGGTGTTACCTATACTCTTCTCTACCCAGAGCCAGAGGCTCAATCTAGAGTCACACATTATGACATTTAGGAAAACTTACTTCACACAAGCACAAAGATAAAAAGACATACATTTGTGTCATCATCTGTTCCATCAGAGGTAATACAGCATTTAACAAAGAAATGTGATCATTTCCAGTTTACAGTAGTTTAATAGCTTTCTTACAAATTAGTATCATATTTTGCAATATTTCCAGAAAACCACTGTGGAGAATAATGTAATATGCTTTAGCATAATTCCTTACCTTTTCTTAAAGGTTTTTTCATTTAACCTGTAATTTGGGCTTTCTGGTATTTTCTAAATCTTTTCTTTTAAGCTTCCTTAAATCCTTTCTAGAGCAAGGCAAAGAGTAAGTATGTTATCCCAGCTAAGTCAGGAAAAAGTCAAATATCCCAGAGAAGCTGTGATTATGCCAGGGGCTCTATACCAAACTAAATTTGAGAAGGTAAAATTAATTCATGATATGTGGGTTGTTTTATTCCTTTGACTATATTTATGAATATATTCATAAGAACTCTTAATTTCTGCCAAAAAAAAAAAAAAAATGCCTGATCTGCCATCTTTGAGGTTTCCTGGAGTACTCTCTTAGGAATTAAGAAACATGTTAACTGTGATCTTACAGTTTGTATTCCTGTTTCATAGGTTACCACAGAACATTTGTTTCAGATGAATCATAAAATAATATTTAGATTCTAGCATGAATTAAATAGATGGGTCAAATATATCTTTAAATTTGTGGATCTAATGTGTGAATTGTGTATTATGTACAAGTTTACCATGATTATTGATAAGCCTGTTGCTGTTGTTTTCCCCAAATGTTATTAATATCAGTGTTTATGGAATTTCTTTTATTAGTTTGAATCTTGGAATGTTCTGTACTAAAATATAATTTAAACCATTTTGTACAATTAAATATGATGCCATGTTGTGTATATCTGTATTAAAGAATATTGTAAATATTAATGTTTGTACAATTATGAAAGCTTTTCCTCAAAATAAGTGAATTCTCCTCCTTGTACTTAAATTGTGACATAAAATAACTGGTTTTAAACTTTGGGGTTTTATCTTATAAGAATTTAAGGGAAACATTCTAAAGATTCTATATAAATAAAATTTTGAAAATAAAGTGGTGAA EMBV3_00314 TTCATGACTGGAAAGGTGGCTTTTGGTTCTTGGTATGACCATGTTAAGGGCTGGTGGGAG Gene GeneID:100297614|LOC100297614:XM_002688336:227_cdna Constitutive 0 NULL GeneID:100297614 6 GENE LOC100297614 NULL similar to sulfotransferase family 1D, member 1 EMBV3_21116 GGGCCTGAATGTCTGATTAGTAAGAAAGAAGATGCTTGGTTCCACAGAGCACACCAGCCC Gene BVV0102_168321 + 0 NULL GK000005.2:1-179788 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190689 TCONS_00190688 TCONS_00190690 TCONS_00190685 TCONS_00190687 1 XLOC_116720 NonCoding TCONS_00190685 XLOC_116720 NonCoding NonCoding - 5:67921-100152 - TSS143053 595 0.092436974789916 3 0.981632019857276 0.000211996238838461 5.4732501077888e-12 2.06570369651679e-05 4.18290320751851e-05 8.29532950211876e-05 0 0 4.97033902958743e-05 1.32243243503141e-05 0 0 7.96812527956007e-12 0 0 0 0.000576959664756751 0 1.39600708880258e-05 0.00112273400129625 5.84488296798483e-05 5.61224498010463e-05 2.29826876744732e-10 1.53824371421341e-05 0 0.000138740479951339 0.000529853604364862 0.0004464640863356 0 0 0 0 noncoding 0 0 0 0 -1.48297184136763 0.125341636279152 -0.0126348861831562 0.795333899328149 GGTCAAGGTTCCAGGAACACCTGTGGGTTCTGAGGAGGCCTCTCCAGGACACATAAGACAGCCTGCCCAGGAACAGTGGAACGTGAGAAGGAAGGACGGGGCTGAGAGGGCCTTTCTGCTCTGAGCTGCGAGTGGACAACAAATGCTAGAATGACAACATGAAGGTTGGAGTTGAAGCAAATTTTGGGGCATCTATGGTCACTTAACAAAAGGGGCCTGAATGTCTGATTAGTAAGAAAGAAGATGCTTGGTTCCACAGAGCACACCAGCCCTTGGACCAACATCTCCAGGATCTGCCATGAGAAAAAAAAAAAAAAACTAGTAATAATAATTTGTGTTTGATTTACAGAACTATTCTCTTGCAACCAAAATCTAATCCAAACCAATAAATTACCTTGTTTCTTCATATCTCATCCCAGGATGGTTAAGCCTTTACCATTTCTGTAAGTGCCTCATTTCCTTTGAAAATGTGTGTTCATACCAAAACCTGAAGACAGATGTTAATTCTAGCATTCTTTATAGCCATTAAAATGTACTGATAACTTCGGGAAATAGTGCATTGATTGGAAAATGTCAGGCTAAAGACTAAAGGAAC TCONS_00190694 s 5' 139271 TCONS_00190694 s 5' 171501 EMBV3_36794 CCTGGCGCAGGTGCTGTAGACACTAGCAGAAAAGTCTTCTTAGTCTCAGAACTATGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22570 CAGATGCAGAACTGGAGGCAGTCAAGGAAAAGAGTTACCGCCAAGTTCGACTGAACGAAC Gene GeneID:407161|bsc1:XM_002690936:262_cdna Constitutive 0 NULL GeneID:407161 10 GENE bsc1 NULL apical Na(2Cl)K cotransporter EMBV3_37832 AACAAGTGGGATACGGTGGGTGCCTTGGCCTGGAAGCTGGCGTTGATTCGGTCCAAGTCT Gene GeneID:100296206|LOC100296206:XM_002688541:151_cdna Constitutive 0 NULL GeneID:100296206 7 GENE LOC100296206 NULL hypothetical protein LOC100296206 EMBV3_15085 TGAAGATACTGAACCAAAATCTGAAGGACGCGTTGGCCGAGGTGGAGCGACTAAGAAGAC Gene GeneID:618737|BST2:XM_002688577:278_cdna Constitutive 0 NULL GeneID:618737 7 GENE BST2 NULL bone marrow stromal cell antigen 2 EMBV3_12676 TGTAGAGTGACGTGCTTTCTGCCAAGTGGTAATTCACCCTGGTTTGCTATGTTAAAGCTG Gene BVV0102_008524 + 0 NULL GK000005.2:29177451-29214786 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213664 TCONS_00213656 TCONS_00213655 TCONS_00213654 TCONS_00191340 TCONS_00213659 TCONS_00213660 TCONS_00213658 TCONS_00213663 TCONS_00213657 2 XLOC_130515 XLOC_116891 Coding TCONS_00213664 XLOC_130515 Coding Coding NDFIP1 7:55062186-55095560 = TSS160018 1571 2 TCONS_00213664_2 102 8 0.953165732777994 0.014503551254895 0.00389914729035976 0.0040756975415419 0.00470525713131412 0.0058856592545655 0.00139375734924551 0.0155089970134427 0.0124357065149256 0.0230416660297023 0.00101646529457304 0.000471439301056761 0.00150053953247014 0.00090864604478059 0.00315140747197001 0.00373227280953008 0.0214955845528995 0.00645904999641731 0.0149660207506294 0.00966950594063416 0.00622683888338191 0.00394815347691318 0.0273195188247089 0.00795313565610275 0.0220233607327154 0.0131270892053341 0.00765791113535595 0.00787304775466552 0.0204888270515327 0.0144433194984711 0.0178960660310538 XM_003585161.2 NDFIP1 PREDICTED: Bos taurus Nedd4 family interacting protein 1 (NDFIP1), 0.0 1889 100.00 0.665817950350095 NM_030571.3 NDFIP1 Homo sapiens Nedd4 family interacting protein 1 (NDFIP1), mRNA. 0.0 1299 87.40 0.670910248249523 TCONS_00213664_2 sp|Q8R0W6|NFIP1_MOUSE NFIP1_MOUSE NEDD4 family-interacting protein 1; 3e-49 159 98.72 0.754901960784314 1 coding 1 1 1 1 1.55521509835591 0.0224358294694769 -0.327516672489715 0.00172365991363079 TTGCAGAATGAAGAAGAGCCTGGAGAACCTGAACAGGCTGCAGGGGATGCTCCTCCACCTTACAGCAGCATCTCTGCAGAGAGTGCAGCATATTTTGACTACAAAGACGAGTCTGGGTTTCCAAAGCCCCCATCTTACAATGTGGCTACCACACTGCCCAGTTATGATGAAGCTGAGAGAACCAAAGCTGAAGCCACTATCCCTTTGGTTCCTGGAAGAGATGAGGAGTTTGCAGGTCGGGAGGAGTTTGATGATCCTGACCAGATGAGGATAGGAAACGATGGGATTTTCATGTTAACTTTCTTCATGGCATTCCTCTTTAACTGGATTGGGTTCTTCCTGTCTTTTTGCCTGACCACTTCAGCTGCAGGAAGGTATGGGGCCATTTCAGGATTTGGTCTCTCTCTAATTAAGTGGATCCTGATTGTGAGGTTTTCCACTTACTTCCCTGGATATTTTGATGGTCAGTACTGGCTCTGGTGGGTGTTCCTGGTTCTAGATGTTTTCTGGCGAAGGCCTTCCTGCATTTATGAATTCTCTCCCAAGAAGCAAGAGAACACCTGCAGGAAGTGAATCAAGATGCGGAACACAGAGGAATCATCACCTGCTTTAAAAAAATAAAGTACTGTTGACAAAGATCGTTTCTCTCTATTTGTTCCTAGGTGTAAAATTTTAATAGTTAATGCAAAATTCTGTAATCATTGAATCATTAGTGGTTAATGTTTGAAAAAGCTCTCGCAGTCAAGTCTGTGATGTATTAATAATGCCTTATCTATTGTTTGTAGTCATTTTAAATAGCATGAGCCTTGTCCCTGTAGTCAGTAGGGGGCAATCTTGCTTTTATTCATCCTCCATCTCAAAATGAATTTGGAATTAAATATTTTAGTGTAAGATATGTATAATGCTGGCCATTTAAAAAGGGGGTTTTCTCAAAAGTAAAAACTTGTTATGACTGCATTTCTGCACATAATCCATTTTGCTGTTAAAATTAATCTAGAAATTTATTTAATTGTACTGTGAACACCTGGAAGCAAAATCATAGTGCAAAATACATTTAAAGTGTGGTCAAGAATATGTTCTTAATTGGTAAAAAATAAGTATTAATTTCTTATAGTCTGTATTCTAATTTTGCAGTACCTTATTCTGTGTTGTGTACCTAAGGGATTGTAAAGGTGTTGTCATTGTGTAAAATAGAAAGGACAAGGACAAATGCAGCATAATGACTAATAAATTGCAATTCTCGACACTTTCTATATGATTGGAATCCCTGCCCCCTTTTTTCTTTTTCTTTTGTCTCCTGATGATTAGGCCAGGGGCTAGGAGTAGAGAGGGGATTAGGTACTAGGAGCAAAGAAAGAATTAGCGTGGAACTTTTGAGATGATCCCTAACATACTGTACTACTTGCTTTTACAATGTGTTAGCAGAGACCAATGTGTTATAAATGTAGAGTGACGTGCTTTCTGCCAAGTGGTAATTCACCCTGGTTTGCTATGTTAAAGCTGTAAATACAACAGAACATTAATAAACGTCTCTTGTGTAGCAACTTTTGCTAAGCAAAAATGCAGCACCT EMBV3_07436 GTGTGATTGCTGTACCAGAACTCTCCCCAGAGGGCAATCATTAAGCTGTAGGAAAATCCA Gene BVT0102_097864 - 1 EMBV3_17738 GK000017.2:19808283-19821908 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00079309 1 XLOC_048194 NonCoding TCONS_00079309 XLOC_048194 NonCoding NonCoding - 17:19815464-19816117 - TSS59249 653 1 TCONS_00079309_1 34 1 0 6.25068968854016e-05 0 0 0 0.000241944714180852 0 0 0 0 0 1.05169372166419e-05 0.000295692373275383 0 0 0 0.00121339706824159 0.000762738443552666 0.00349658936165237 0 0 0 0.00019318740479273 0.000252883965678471 0.000975584084010045 0 0 0 2.94186504905122e-05 0 5.52427145851747e-05 NM_014331.3 SLC7A11 Homo sapiens solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 (SLC7A11), mRNA. 1e-148 529 79.42 0.946401225114854 0 noncoding AAGTCGGGCAGAGGGAGAGAGCCTCACCATTCTCACTGGTCCTCATCTGCGGCAGTGTTTCTGCCTCTTAGCATTGTGATTGTGAACCTTGGCAAATGGGACTGTGTGTATTTTATACACATTTTACACAGTATCCATTGATAAATTCTTACGGTGCAAAATTCCTTTTCTGCATCTGTATTCCAAGACAATAGAAGTACTAAGATATTTATGAAAATTCAAATGATGCAAAGGGACTTTCATTTGTGGAGTGTGCAGTGCTTCTTAGGATTCTCTGGCACTGATACCTATACCAGCATGCGATATGTGAAATAAAATGGATTTTTCTACAGCTTAATGATTGCCCTCTGGGGAGAGTTCTGGTACAGCAATCACACTACCAGATGGTGTTTATGGGCTATTTGTGTAAGTGGTAAGATACTATGAAATAAGTGTGCATTCATCTGGTGGAAACTCTTGATGCATGTGTTTTCTTGTGGAATAAATTTTGGTGCAATATGATGTTAGTGTTGCATTGCATTTATTTCAGTTGTATTTATGTACATGTATACCTGTCATGCTTCTGGTTCAAACTTTGAATACATATTTTTGTACATATTTTTAGTAGAAAATACTTTAAATGGAAATTAAATAAACATTTGATAGTTTACCAA TCONS_00075042 TCONS_00075045 TCONS_00075053 TCONS_00075059 TCONS_00075062 . 3' 7183 TCONS_00075042 TCONS_00075045 TCONS_00075053 TCONS_00075059 TCONS_00075062 . 3' 7835 EMBV3_25249 CAACAAGGGAAATAACAGTCTTGCCGATAAGTGATGCTGGGACAACTGGACAGCCGCATG Gene BVT0102_185874 + 1 EMBV3_15324 GK000003.2:94331674-94414996 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33438 CTTAGGTTATTCATTCATTTATTGGGCAGTGTATGTATATGTAAGGATGGGTGGGGAGGG Gene GeneID:505060|CYP51A1:NM_001025319:10_cdna Constitutive 2 NULL GeneID:505060 4 GENE CYP51A1 CYP51 cytochrome P450, family 51, subfamily A, polypeptide 1 EMBV3_17701 AAGTGGAGCTCAACAAGGAGGACCCGACCTACACCGTGTGGTACCTCGGCAACGCCGTCA Gene GeneID:100298683|LOC100298683:XM_002685725:440_cdna Constitutive 0 NULL GeneID:100298683 2 GENE LOC100298683 NULL hypothetical protein LOC100298683 EMBV3_07008 GTTGGTGGTCCATCCCAACAGGTGATGACCCCACAAGGAAGAGGTACTGTTGCAGCAGCT Gene GeneID:613304|SNRPB:NM_001034731:1261_cdna Constitutive 1 NULL GeneID:613304 13 GENE SNRPB NULL small nuclear ribonucleoprotein polypeptides B and B1 EMBV3_21197 GCTATGGCAGCCAAGATGTTACTTGATGGTGAAATTCAAGCTAAAGGCCTGATGGGACCC Gene GeneID:520865|AASS:NM_001109797:31_cdna Constitutive 0 NULL GeneID:520865 4 GENE AASS MGC166100 aminoadipate-semialdehyde synthase EMBV3_20011 TCAACAAGATGCTGTCGGTTGTCTACACGGTGGCCACGCCCATGTGCAATCCAGTCATCT Gene GeneID:520181|LOC520181:XM_002695479:204_cdna Constitutive 0 NULL GeneID:520181 18 GENE LOC520181 NULL similar to olfactory receptor 1336 EMBV3_02533 GAAAGTGAAAGTAAAGTCACTCAGTCGTGTCCAACTTTGCAACCCCATAGACTGTAGCCT Gene BVT0102_021097 + 0 NULL GK000018.2:60664195-60695651 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087417 TCONS_00084608 2 XLOC_052474 XLOC_051618 Coding TCONS_00087417 XLOC_052474 Coding Coding - 18:60691765-60694833 - TSS64913 1657 1 TCONS_00087417_1 90 0.0778515389257695 2 0.460384740789045 0.00020678126899253 0.000141700925251599 0.000114953659212392 4.12618451505466e-05 0.000101767210452941 5.17381465746769e-05 0.000182557548044429 8.34404815667809e-05 0.000148871151588172 0.000101765909914087 0.000173025850127213 0.000108723652823524 2.81387088212863e-05 0.000151493749590471 0.000101904286910475 0.0056254072393952 0.0012567756610919 0.00329167824290748 0.00014363513134991 0.000185872088064582 0.000107625405979037 0.00119840261644254 0.0023217610886631 0.00348109323514812 0.000333928869965446 0.000266381695539573 0.000164399051000255 0.000376662900108948 0.000218738318754159 0.000268725539265107 XR_232910.1 LOC618289 PREDICTED: Bos taurus zinc finger protein 208-like (LOC618289), 0.0 2360 92.59 0.954737477368739 NM_003414.5 ZNF267 Homo sapiens zinc finger protein 267 (ZNF267), transcript variant 4e-142 509 73.46 0.533494266747133 TCONS_00087417_1 sp|Q6ZT77|ZN826_HUMAN ZN826_HUMAN Putative zinc finger protein 826; 3e-12 60.5 49.30 0.777777777777778 0 noncoding 0 0 0 0 -1.23668104406479 0.0818105053502608 -0.292098536820922 0.0212638779832937 TTTAAAACTCAAGCCTTATTCAACATCAGCGAATTCATGCTGGAGAGAAACCTTATAAATGTACAGAATGTAGCAAAGCCTTTACTTACAACTCACTTCTTATTCGACATCAGTGAATTCATACTGGAGAGAAAACTTATAAATGTACAGAATGTAGCAAAGCCTTTACATGCAACTCAGACCTTATTGAAGATAAGTGAAGTCATACTGGAGAGAAATCTTATATATGTAAAGAATGTAACAAAGCCTTTGTCATTCCTCATTTCTTACTGGATATCAGCGAATTCACTCTGGAGAGAAATCTTATAAATGTTCAGAATGTGGCAAAGCCTTTACTTACAACTCACATCTTACTCAACATTTGCGAATTTATACTGGAGAGAAACCTTATAAATGTACAGAATGTAGCAAAGCCTTTATCTGTTACTCAGATCTAACCTATCATCAGGAAATCCATACTGGAGAGAAGCCTGATATATGTAAAGAATGTAACAAAGCTTTTCATCATTGCTCAGTTCTTACTCAACATCATCGAATCCATTGGGGGAAAAACCATACAAATGTAAAGAATGTGGCAAAGCCTTTATTAGGAGTTCGGCCCTTTTTCAACATCACCGAATTCATACCGGGGATAGACGTTATAAATATACAGAATGTCGCAAGGCCTTTATTACATGTTATAATCTTACTGAATATCAGTGCATGCATACTGGAGAGAGACCATATAAATGTACTGAATATGGCAAAGTCTTTGGTTACAACTCTGCTCTTACTCAACATCAGTGAATGCATACTGGAGAGCGACATTATGAATGTACTCAATGTGGCAAAGCCTTTAGTCGAAGTGCTTATCTCACTAAACATCTGAGAACACACACTGGAGCGAAATTCTAGTAATGGAACAAGTGATGGAAGAGGTTTGCCCTAAACATGCATCAGAAAACACGAGAGTTTATATAAGAAAGCAATGGAAATGATGTAAGCAATATGTAGAAAAGTATTTAATCAAAAGTTAAATGGAAATAAATATCAGAGATTGCATAATAGAAGGCATTTCATCAATCTTGTTTTCAGAAGTTTCTATGAAGTACAATGACTGTAGGGAGTACTCCATACTTAAAACAAATGGAAAATGGACATATTAGCATGAATCGTGAGATGAAGGTTGATGGTTAGAAAGTTACAATTCTTAGCAATGTATGTATGAAAGTGAAAGTAAAGTCACTCAGTCGTGTCCAACTTTGCAACCCCATAGACTGTAGCCTACCAGGCTCCTGTGTCTATGGGATTTTCCAGGCAATAGTACTCGAGTCGATTGCTATTTGTATGCTCGTTTATAATGACATGATTTGAGATTCTCTGATGTGAATGTAATTCAACACTCAATCCATACTAAGCTTTCTACTGTGTTTGGAAACGTAGATTTTTTATGGTTTATTAAAGATTAGCCTTTTTATGTTGTGTTGTAACCATTTCTATCTATCCTCCATTAGAAGATGAAGGATACCATAATGTAAAATGGACAATGACCATCTAAATGGAGATGTTTAGCATTGATGTGAAATATCTGGAAGTTGCCATGATAAGTGCGTTTGCAGCCTAACATCCCCAGAGAAGACAGAGCAGGAGGAAGAAGAGGAGGAAATGGCAACTTCTC TCONS_00087420 s 3' 3814 TCONS_00087420 s 3' 819 EMBV3_25821 CATGTGCAATCTCTCACCCAGTCTCTCTTAACTCCCAACTTGTGCAGGGCTTGCCCCATT Gene GeneID:520247|LPPR2:NM_001046248:53_cdna Constitutive 0 NULL GeneID:520247 7 GENE LPPR2 MGC137198 lipid phosphate phosphatase-related protein type 2 EMBV3_18470 TTCTTCTTACAAAGAAATTAATCTGCAATCCAATGAAAACATTTGTTAATGACTATTTAA Gene GeneID:540337|PEX13:NM_001076212:164_cdna Constitutive 2 NULL GeneID:540337 11 GENE PEX13 MGC142571 peroxisomal biogenesis factor 13 EMBV3_09852 CCTGGAGGGGGCCTCGGAGCGCACGGGAAGGTCCCACACCAGCCAGCAGCTTCCTGCCGC Variant GeneID:618107|C8H8orf13:NM_001076494:23_cdna 136^235 3 EMBV3_30196 GeneID:618107 8 GENE C8H8orf13 C8orf13 chromosome 8 open reading frame 13 ortholog EMBV3_08554 CTTGGCTTATAGAATAAAATAGGAGATTTTGACTATTACTGATAAATGATACATCCCTTG Gene GeneID:512545|ITFG1:NM_001038532:210_cdna Constitutive 2 NULL GeneID:512545 18 GENE ITFG1 MGC128970 integrin alpha FG-GAP repeat containing 1 EMBV3_36432 GGATCTCATCACCAGTGATATAGCAGATTACCAGCAGCCTCTCATGATTGGCACCGAGAC Gene GeneID:100298760|LOC100298760:XM_002690094:75_cdna Constitutive 0 NULL GeneID:100298760 9 GENE LOC100298760 NULL similar to discoidin, CUB and LCCL domain containing 2 EMBV3_35826 ACGGGTTTTTCTCACAGTCGTCCTAGAGAGCTACAAGAAATGATGCCCGTTAAGCTGCCC Gene GeneID:506090|XIRP2:XM_002685327:10_cdna Constitutive 0 NULL GeneID:506090 2 GENE XIRP2 NULL xin actin-binding repeat containing 2 EMBV3_29078 GTCTTCGTGGTGAGCAACTTCTCCAAGGATGGAAACAAAAGCCTGATGACTCTCTCGAGC Gene GeneID:618664|ART5:NM_001076515:31_cdna Constitutive 0 NULL GeneID:618664 15 GENE ART5 MGC143359 ADP-ribosyltransferase 5 EMBV3_35174 GCTAACTGTCCTACGGGAACTGGTTTACAGGCTGTAGATATACTGATCAGTTGCCTGTAA Gene GeneID:539371|ZBTB9:XM_002697180:224_cdna Constitutive 1 NULL GeneID:539371 23 GENE ZBTB9 NULL zinc finger and BTB domain containing 9 EMBV3_29587 GGGGATCCTCAGCATTACCCATGACCCCAGTGAGGAGTGGTTGTTAGTAGGCTTGAGAAT Gene GeneID:100336015|LOC100336015:XM_002694912:1001_cdna Constitutive 0 NULL GeneID:100336015 18 GENE LOC100336015 NULL transducin-like enhancer protein 2-like EMBV3_14304 TGCCTTAACTAGCATTACCACCATATAGGCACTTCTCCACATAGTCAAATTATGAACGGC Gene BVT0102_054668 + 0 NULL GK000010.2:6713109-6725336 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015794 TCONS_00015796 TCONS_00015795 TCONS_00015793 1 XLOC_008557 Coding TCONS_00015795 XLOC_008557 Coding Coding COL4A3BP 10:6722311-6853384 j TSS11075 5089 1 TCONS_00015795_2 598 17 0.9613037109375 0.00315878317353461 0.00324796134973936 0.00180976232064367 0.00179882558930345 0.00152548772260038 0.00174260529586484 0.00249720907937706 0.0022239996871865 0.00334894063269211 0.000732155597851987 0.000746540352237763 0.000363145737565355 0.000233920007041099 0.000450615460570345 0.000714288092884083 0.0142349786986285 0.010554686865768 0.00859274682267087 0.00392568277683498 0.00358471241625041 0.00114741796789931 0.0056755960506393 0.00176568529737581 0.00802889987736469 0.0027611071629562 0.00241851838204648 0.00271338937224623 0.00108912084047413 0.00122560874187738 0.00159471707701957 NM_174765.2 COL4A3BP Bos taurus collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (COL4A3BP), mRNA. 0.0 2378 99.92 0.259382982904303 NM_031361.2 COL4A3BP Homo sapiens collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (COL4A3BP), transcript variant 2, mRNA. 0.0 6255 87.43 0.998427981921792 TCONS_00015795_2 sp|Q9GKI7|C43BP_BOVIN C43BP_BOVIN Collagen type IV alpha-3-binding protein; 0.0 1216 95.83 0.998327759197324 4 coding 0 0 0 0 -0.177136437503629 0.312539625297324 -0.00361758994987248 0.9384389718712 NNCCTCCTTCCCCGGTCCGCTTGGTGTCAGGCGCGGCGGCGGCGGCGGCGGCGGCGCGGCGGGCGGACTCCATCCCTCCTCCCGCTCCCTCCTGCACCGGAGCGGGCACTCCTTCCTTCGCCATCCCCCGACTCTTCACCCCGGGGACTGGGCGCCTCCACCGGCGCAGCTCAGGGAGCGGGGGCCGGTCTCCTGCTCGGCTGTCGCGCCTCCATGTCGGATAACCAGAGCTGGAACTCGTCGGGCTCGGAGGAGGATCCGGAGACGGAGTCCGGGCCGCCGGTGGAGCGCTGCGGAGTCCTCAGCAAGTGGACAAACTATATTCATGGGTGGCAGGATCGCTGGGTAGTTTTGAAAAATAACACTCTGAGTTACTACAAATCTGAAGATGAGACAGAGTATGGCTGCAGAGGATCCATCTGTCTTAGCAAGGCTGTCATCACGCCTCATGATTTTGATGAATGCCGATTTGATATTAGTGTAAATGATAGTGTTTGGTATCTTCGTGCTCAAGATCCAGATCACAGACAGCAGTGGATAGATGCCATTGAACAGCACAAGACTGAATCTGGATATGGATCTGAATCCAGCTTGCGTCGACATGGCTCCATGGTATCATTGGTATCCGGAGCAAGTGGCTATTCTGCAACATCCACCTCCTCATTCAAGAAGGGCCACAGTTTACGTGAGAAACTGGCTGAAATGGAAACCTTTAGAGATATACTGTGTAGACAAGTTGATACCCTACAGAAGTTCTTTGATGCCTGTGCTGATGCTGTCTCCAAGGATGAATTTCAAAGGGATAAAGTGGTAGAAGATGATGAAGATGACTTTCCTACGACACGTTCTGATGGAGACTTCTTGCATAATACCAATGGCAATAAGGAAAAGGTATTTCCACATGTAACACCAAAAGGAATTAATGGTATAGACTTTAAAGGTGAGGCGATAACTTTTAAAGCAACTACTGCCGGAATCCTTGCTACACTTTCTCATTGTATTGAGCTGATGGTAAAACGTGAGGACAGCTGGCAAAAGAGAATGGACAAGGAAACTGAGAAGAGAAGAAGAGTGGAGGAAGCATACAAAAATGCCATGACAGAACTTAAGAAAAAATCCCACTTTGGAGGACCAGATTATGAGGAAGGCCCAAACAGTTTGATTAATGAAGAGGAGTTCTTTGATGCTGTTGAAGCTGCTCTTGACAGACAAGATAAAATAGAAGAACAGTCGCAGAGTGAAAAGGTCAGGTTACATTGGTCTACTTCAATGCCATCTGGAGATGCCTTTTCTTCTGTGGGGACTCATAGATTTGTCCAAAAGGTTGAAGAGATGGTGCAGAACCACATGACCTATTCATTGCAGGATGTAGGTGGGGACGCCAACTGGCAGTTGGTTGTAGAAGAAGGGGAGATGAAGGTATATAGAAGAGAAGTAGAAGAAAATGGGATTGTTCTGGATCCTTTGAAAGCTACCCATGCAGTTAAAGGCGTTACAGGACACGAGGTCTGCAATTACTTCTGGAATGTTGATGTTCGCAATGATTGGGAAACAACTATAGAAAACTTTCATGTGGTGGAAACATTAGCTGATAATGCAATCATCATTTATCAAACGCACAAGAGAGTGTGGCCAGCCTCTCAGCGGGATGTCTTATATCTGTCTGCCATTCGAAAGATACCAGCTTTGAATGAAAATGACCCGGAGACTTGGATAGTTTGTAATTTTTCTGTAGATCACAGCAGTGCTCCTCTAAACAATCGATGTGTCCGTGCCAAAATAAACGTTGCTATGATTTGTCAGACCTTGGTGAGCCCCCCAGAGGGAAACCAGGAGATTAGCAGGGACAACATTCTATGCAAGATTACATACGTGGCCAATGTAAACCCTGGAGGATGGGCCCCAGCCTCAGTGTTACGGGCAGTGGCAAAGCGAGAATATCCAAAGTTTCTAAAGCGTTTTACTTCTTACGTACAAGAAAAAACTGCAGGAAAACCTATTTTGTTCTAGTATTAACAGTGACTGAAGCAAGGCTGTGTGACATTCCATGTTGGAGGAAAAAAATTAAAAAACAAAATTGAATGCTCTAAGCTGGAACATAGGATCTATAGCCTTGTATGTGGCCCAACACCTTGGCCTTGTGTTCAAAAATGAAGAAATACCGCAATAGCAAAGCTGAACATCTTAACACTAGCTGTCTTCTGCTAGATCTCCTTGCTCAGCATATAACTATAAATACATGTAAAATTACATGTATATGGCTATATTTTTATTTGCTTGCTCCTAAAAGAGAGAAAAAAAAATCAACTTTGAATCACAACTAGGAATTGATGCTTTAATTTTTGGAAACTTTTTCAGAATTTTTAATTTTCTGTGGTTCGGCCTGAGACCCTCAGTTGTTATCAGGCTCCGTGCGCAGAAGAGAAGCACACAAGTTGGACGCACGTGGGCACGCGCTTTCTGTGCGCCAGGTGCCTGGATGGGGTTCTGTTTTTAGGCCCACAGTCAAGTCTGTGTCTGGAATTTTTTGACTTTTTTGCTTTGTATAATCATAGAATTCGTTGCTGCTGATTTCTATAATAATTCATGTTGTTATGTACAGTGTCTCTTAATAACTGAGGGCTGTCAATAACGTGTGATTTCGCCTTTTCTATAGTCTTACTCCCATGAAGAACCTTGGTTCTGATGGAGAAAGAGTGAAAAGCTTTATTTTTTCTCCAGATACCTTTATATTTCTATTGTATTTTTAGTTGTGTACTGTGTGCTACAGATTTTTTTCAGTTTATTACAAACACAATTTGGTAATTCCTAAATTGGTTCTGTCTGCCTCCAAACAGAAACACCTGTACAACCTTACTAGGTATAAACTACTTTCTGGTAAAACGGTCAGAATAAAATGATGTCATGTTTTCCTGACACACGTGAGAGGGCATACGGTATTGTTCCAGCAAATCTCACTGTTTGGCATTTGATCCAGTATTTCTAGTATTCAGTAACGTATGTTTTTTCATTCTAATTTGGGTTGGTTTAAAAGCTATGTTACAAGATAGGCATAGAAAATGTGGGTGTCACTCCTGTTTGCCTCTTGATCAGAAACTTTAGCAGGGCAGAAAAGAAGTCCGAGTGATTCGAACTGAAATTCTTTCTTTAGTTGCTGTAAGAAGTTAAATGTAAAATACCTTTTTTAGTTTTAGGCCTCCCTCTTTGAAAACCTTGACACATGGAGTTGAGGCAGGGAATGGAACTCACTGAAGTGGAAATGACTGCCCACTTCAGAACCTTCATTTTGTTTATACACAAGTGTGCTTACACAAATCAGAGGCATTTTGTAGATGCTTTGCTGACTTGTTCATCTCTATAGAAACACAGAAACCAGACCCATTTTGTAAAGCAGAAAGTCATGTCATGTGGAACATGTCCTGTATATATTTCATACATGGTAATGGAGTCTTAATGATAAATGCAAGGTGATAACTTAATGATGGGATTAGTCTGATCACTTAATATACACAATCCTGGAAGTTAATTACTTGCATCAAATATAGTGGTATTTATTATTCTGTACAGAGAGAAAAATACATATAAAGCATATGCTCACATTACATGCACGCAGATTTCATGCTCCATAAATCTTTTCTATTTTTTAATTTACCTTTCTCTAAATGATGTGCATGGAATATGCCTTATTACAGAAAAATGCCGTTCATAATTTGACTATGTGGAGAAGTGCCTATATGGTGGTAATGCTAGTTAAGGCAAATAAAACAAATTATCTTATCAGTTTACTACATCACCGGTAACATTTTTTATCATGATGTTTAAGAAAGAAAAATTTATACCTCAAATGTGTATTTTATTTTACAATCAGTTCTGCAGTTGGGATGGGAGGGTTGGGGAGGGAAGGGTTATTCACCATAGCCACTGATGGGAATCTTCTAAAATATTCTATATGCCCACTATAAATGTTTCTCTGTTTGCCATTTCTGATAACTATCATGACTAAATTGGATAGCTTTATTTTACAAAGGTATGGACAGTTTACAGAGCAGTGTCTAAATCTTCACTAGTTGCATTTGCACTAAATGTTAATGATATACTTTTGCAATTTATTCTGTAAATAAAATGATTAAACTAAAAATATTTGTATTAAAGAAAAGAAAAAGATACATTTTATCCTCAGATAATTGCACTGGAACTTCACTAGGGTTAATCCTGCCCAACCAGATTTAGAAAATGAGTTAGGGAATACGAAGGATGTTTAAAAGAAATCAAAATTTGGAGCTGTACTAGCCCTTTAGACAACATTCAGACCCTCTAGAATTATTTCCGTATGGCTAATTCCAACATGCTGAATATACATGATACTTTCTTTTCTACAGTTATTTCCTACTTCTCTTCCCCAAGCCAAAAAAAAAAAGAAAAGATTTAACTCTTTCCTACTCAGTTGCTCTTTTGTGCTGTGATAGAAGCATGAACAGGACTGGCGATGAGGGGTTTTGTCCCTGAGTCCCCACTGTACAGTTCAGGAGAGCACACTGTTCCACTTGCAATTCAGGAGTCCTGATTTTGAGGTGGAGGGTATGTCACAGCAGCTCTTGATTTGGGTTCGCCACAGGGGGAGCCAGACCAAGGAGGGCGGTGACTGGGAGGGATGTCAGAATACAAAAGAAGGAAAAGGAGGAATGAGGTTCCCATTTCTTCAGTTTCATCAACTAATTTGTACTCCTCTACAACATCAGTGTCCATTGCTATTGAGAAAATTTTAGTTGGGCTGAGCTGGTTCTCTTGTGAAATTGTGCTTGTTATCTTTAAACTTATTAGTTGTTGTCCAGTTAAACACTTTTCACCAGTATTCATCCAGAAGTTGTACAGACTGTATTTCGATTATTGTCATTGTTCATCTACAAACTCAAAACATAATCATTTTACGTACCTTGGGAGTGTGTAGAGTGTAACTATTCTAAATAGCTTTATGATCCTGATGATGTTTTTAAAAAAATAATAAAGTTGGATCTTCCATGTTACAATCACAAAATTAAAACCAGTATTTAAAAGTGGAAAAGTATTAAAATATTATGACAAATGTGCT EMBV3_39670 GGACCAGAACATGCCTTCTTCAGAGTGACAGGGCTACAGAAGAGAGAAGAATCCAGACAG Gene GeneID:509235|ACE2:NM_001024502:14_cdna Constitutive 0 NULL GeneID:509235 X GENE ACE2 MGC127593 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 EMBV3_11837 CAGCTGATGCTAACAATTACACCAAACTGTAACTGAGGTGGTGCTCTGAGAATGTGGGTA Gene BVV0102_127368 + 0 NULL GK000004.2:81929352-82018431 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189085 1 XLOC_115124 NonCoding TCONS_00189085 XLOC_115124 NonCoding NonCoding - 4:82009306-82009870 - TSS141453 564 1 TCONS_00189085_1 38 0.0691489361702128 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000121785311664998 0 0 4.44874003711478e-05 0 0 0 1.31572133689348e-05 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0512088500361685 0.689772818609162 0.0512986024223218 0.311276587796753 TTACATGTGTGATATCAGTTTCCCCCAAGAATGAGTGCAAAATAACTCAGCTGGCTAATAGTAGTCTCAATTTTATGAACTGATTGATCTTTCTCTTTTAACACAGAAGCAATAGTAACAGATTCAATAAAGACTTCATTTTATCTGTTTTATTTTGTTAAGAGAGTAGCAGCCCCACAGATTTTTAAGAAAGCTAGTTTGCTCATGCTACCAAGAATGTACCCACATTCTCAGAGCACCACCTCAGTTACAGTTTGGTGTAATTGTTAGCATCAGCTGAAGTAAAACCTTACAGTGACTCTCAAAAAATGTACTAAGGGCAAATAGGAATGGTTTTTCTTTTTTACATAGTTGGAAAAAAATATAAGCAAAATCTTCTGATTTCTTGTATTCCCCCTCCTTACCAGATAGTTGTCTGGGGATCTTCTTCTGATCTACTGTTTTGAATTAAGTGTATCTACCTTTTCCCCAGATTTTGATTTTCATGATAAAGTACATATTGTTCTTTTTCTTAAAAACCAATGCCTCTACAAATATTTTTCTTTTCTTATTGTAAAACAGCAC TCONS_00184694 . 3' 6651 TCONS_00184694 . 3' 7214 EMBV3_39424 CCATGGAGACACCGATTAGGGTCAAGATAAACCACCGCTTCCTGCTGATGATCTGGGAGA Gene GeneID:777604|SERPINA12:NM_001077517:339_cdna Constitutive 0 NULL GeneID:777604 21 GENE SERPINA12 MGC143290 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 EMBV3_31508 GCACAAGTGTCCTTTCTGCCCCTACAGTGCCAAACAGAAGGGCATCCTTAAGCGGCATAT Gene GeneID:521943|LOC521943:XM_002685612:263_cdna UTR3_Alt 2 NULL GeneID:521943 2 GENE LOC521943 NULL similar to hCG1788238 EMBV3_21021 TCAGGCAGTTCGGACAAAGACAGTTCAGCGGAGAGAACAAGAACTGTTCAACCGCATAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32056 CCTGGCCGTGAACATGGTGGACAGCAAGCACAGCATGAACATCCTAAACAGAATCCAGGA Gene GeneID:517438|DDX19B:NM_001046230:106_cdna Constitutive 0 NULL GeneID:517438 18 GENE DDX19B MGC134354 DEAD (Asp-Glu-Ala-As) box polypeptide 19B EMBV3_33914 CTGTGGACCCTTCTTCTTGTACTAGTGGTGGTGTGGGACAGTCGGAGTTTGCTGTCGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21931 TGGCCACAGACTACAAGACCTACGCCATCATGAACATCATCCTGAACAGAGGCGGGAAGC Gene GeneID:100295548|LOC100295548:XM_002691716:96_cdna Constitutive 0 NULL GeneID:100295548 11 GENE LOC100295548 NULL similar to lipocalin 8 EMBV3_17927 CCCAGCTCTTTCCACCTATAGCTCCTCTGGCCCCTGATAGAGTCACTGACAACACAATAA Gene GeneID:520410|LRRC10B:XM_002699282:207_cdna Constitutive 1 NULL GeneID:520410 29 GENE LRRC10B NULL leucine rich repeat containing 10B EMBV3_32218 GACGCTTTCATGGCGCAGCCCCCAGACGAAGATACACATTCCAGTTTTCCTGATGGTGAA Gene GeneID:617078|TRIM37:NM_001110182:69_cdna Constitutive 0 NULL GeneID:617078 19 GENE TRIM37 MGC159446 tripartite motif-containing 37 EMBV3_16584 TCTGGATTGTCAAGAACAGTTGGGGTCCAGAATGGGGCTGGAATGGCTACGTGAAAATGG Gene GeneID:281108|CTSL2:NM_174032:75_cdna Constitutive 2 NULL GeneID:281108 8 GENE CTSL2 CTSL CTSL1 cathepsin L2 EMBV3_21974 GATAGCTGCTGTCACAACCCCCTTTTAAGGGAATTTTAATGTTTGATAATTATATCTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38352 GGGATGAAGCAACTGTTTAGACTCACTATAAGTAACTTTTGGTAACTAATGGGGATAGAC Gene GeneID:535372|SGCB:NM_001102188:119_cdna Constitutive 2 NULL GeneID:535372 6 GENE SGCB MGC155195 sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) EMBV3_06458 GGCTGAAAACAGCTTTTGTCTTACTGAATCCTTATCATATCTGGGGCATCTTCATGAAGG Gene BVT0102_053787 - 1 EMBV3_18499 GK000024.2:12960190-13064116 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06472 GCGGTGGCGGGACCCGCGGCCATCTCTCAGTTGACGAAGGATCAGAGATTGGTGTATTCG Variant GeneID:512265|HERPUD2:NM_001075558:48_cdna 346^756 1 EMBV3_27278 GeneID:512265 4 GENE HERPUD2 MGC140609 HERPUD family member 2 EMBV3_07713 TGCAGTGTCCGTCTGTTGCTCCCTTGAGGTGGTGACGTATCTCTTTAGCTGATGCCATGA Gene BVT0102_291588 + 0 NULL GK000011.2:106465660-106691742 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23095 TCCATTGAAGGAAGGTGTTTGGGGGTTGCCTTTTGGACCTACCATGTTGCTCATTCTTGC Gene GeneID:540991|LOC540991:XM_002699078:7_cdna Constitutive 0 NULL GeneID:540991 29 GENE LOC540991 NULL similar to NEL-like 1 (chicken) EMBV3_13601 AACGGTTTTCTGCCTACAAAATCCCAGAGCTTCTCGTGGAGTCCGAACCCAAGCTGGACT Gene GeneID:526482|TTLL6:XM_002695940:363_cdna Constitutive 0 NULL GeneID:526482 19 GENE TTLL6 NULL tubulin tyrosine ligase-like family, member 6 EMBV3_35453 CCATTTCAGACTCTTGGATTCAATTCTGAGGTCATTGAGGTGAAAGTCAAAAGAAGAACT Variant GeneID:530784|C29H11orf54:NM_001046315:4_cdna 369^545 1 EMBV3_41836 GeneID:530784 29 GENE C29H11orf54 C11orf54 MGC128152 ester hydrolase C11orf54 homolog EMBV3_07464 CCATAACGTGTAGAGTCATCAGCTGTCCAGCAGTTTCCAACCAACTGTCATAATTGATGC Gene BVT0102_045506 + 0 NULL GK000025.2:28157682-28162567 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145034 TCONS_00145035 TCONS_00145036 TCONS_00145033 1 XLOC_088725 Coding TCONS_00145034 XLOC_088725 Coding Coding VKORC1L1 25:28101579-28160934 = TSS108777 4133 1 TCONS_00145034_2 176 4 0.930434343093979 0.00180887643677595 0.00175783085561969 0.00157100981352225 0.00150523897009661 0.00120672988277459 0.000514625962977497 0.000924341886353637 0.00110918339319391 0.0013259510276689 0.00069719688899104 0.000251981035128577 0.000204056826553124 1.01072546016146e-33 2.45618637928449e-06 0.000328264553771255 0.00315131124710891 0.000838102606767541 0.00113768798034012 0.00159231353190902 0.00286565367262803 0.00120631502770033 0.00121914159474514 0.0014168008526511 0.00107329523655818 0.0024132655425861 0.0021872949642419 0.00137739001583496 0.000229945976163293 0.000362601081626496 6.81241507247219e-05 XM_002698075.3 VKORC1L1 PREDICTED: Bos taurus vitamin K epoxide reductase complex, subunit 1-like 1 (VKORC1L1), mRNA. 0.0 7454 100.00 0.999758045003629 NM_173517.4 VKORC1L1 Homo sapiens vitamin K epoxide reductase complex, subunit 1-like 1 (VKORC1L1), transcript variant 1, mRNA. 0.0 2717 78.03 0.815388337769175 TCONS_00145034_2 sp|Q8N0U8|VKORL_HUMAN VKORL_HUMAN Vitamin K epoxide reductase complex subunit 1-like protein 1; 6e-121 343 95.45 0.994318181818182 1 coding 0 0 1 0 -0.710676100076573 0.118898442169458 -0.0657911724154374 0.187268476802479 ATGGCGGCGCCCGTCCTGCTGAGAGTGTCGGTGCCGCGTTGGGAGCGGGTGGCCCGGTATGCAGTGTGCGCCGCCGGGATCCTGCTCTCCATCTACGCCTACCACGTGGAGCGGGAGAAGGAGCGGGACCCCGAGCACCGGGCCCTCTGTTATCTGGGGCCCTGGGTGAAGTGCTCCGCCTTCTGTGCTAGTAGATGGGGTCGAGGATTTGGTCTTTTGGGTTCCATTTTTGGAAAAGATGGTGTATTAAACCAGCCAAACAGTATCTTTGGACTTATATTTTATATACTACAGTTATTACTTGGCCTGACAGCGAGTGCGGTTGCAGCTTTAATCCTCATGACATCCTCCATCATGTCCGTAGTGGGGTCTTTGTACCTGGCCTACATCCTGTACTTTGTGCTGAAGGAGTTTTGCATCATCTGCGTCATCACATATGTGCTGAACTTCATTCTTCTTATCATCAACTACAAACGACTAGTTTACTTGAACGAAGCCTGGAAACGGCAACTGCAGCCCAAGCAGGACTGACCGCCTGATGAACTCTTTAACTGACAGTCTGAAGTCCCTTTTTCCATTAAGTTTATTTTGCAGCAGTTTGGGTTTTTTTTTTTTTTTTTTTAATTATTATTATTATTATTCTTCACAACAGACACTTTCCCTAAGAATCTTAAACTGATTTTTTAAAATCCTATAAATTAGAAGGGGCTCTAGCTATTTTCTGTGTCAATCTTCATTTTAAATATGGATACAAAGGATATACCAAGCCAATCAAAGACAAGCTTTAACTTTACTTTGGAGATGTTTCTGAAATGGTAAAATGTAGCCCTAGCCCCTTCCCCTCAGTTGTAAAGTGAGCAACCATTGCTAGTAATTCTCTAATGTGTATAAATTCAATTTCAGGTATAACAAATGTGATCATGACATGAAAATATTTTAGAATAGATACTGTATTCAATATTGCCATGTTTACAATATGTAATATGTTTTTTAGCCGATGGATTTAAACATGTAGATTCAACTAGAATCCATTTATGTGATATTTGTAAATAAAGGTAGAGATATTGGATCCAGCCCTGTAGAAACTTGCTGTACAGCTTAGTTGGAGTGTAGCAATGAGGAACAATCAGCTCAATGCTGACTGAAGATGTAGTGAAAATACTAAGTCCACACAGAGCATCTTGTGGAAAGGACTGGCAGCTGTGGGTCCAGCACTGACAGCAAAAATAATAGGGTGACTGGTTCCCTTTCATCTCCTTCCTTTGAAAGGAAGAAACTAAATTTGGACATTCAAGTCAATCTTGTACCTAGTCATAGAACTGGATCAATTAGAAACTTACAGTGTGAGTCATGTGACCAGACTTTCAAGGCCTTCAGGACACTAAAGGTGGGCAAATGGGTAGATTTCTCTGGCAAAAAGCTGGAAATAGTACTATGGCATTTCATAGTGTCTTACAACAGGTGAATTTTCATGCAGATAATTTTCCTTCACATTAGTGCCAGTCAACCAAACAGTATTGGCTTGGAAAATCATCAGTATAAGCCCCAGTCACTCCAGAGTAGGATTACTCTTGGGTAGCTCCATATGTTTCTCCTGTTTCTTTCTTCACTAACTAACCGGACATCTAGTTTGTTTTAGAGTCAGATATTAGATTCGTAAACTTTAGGGCTGACATGCTGCTCAATTGGCTTAACTGGGAGGAGTACTAAAGGGAGAAGTATCTCAAGGTGAACATAGTACTCTTTCTAATAACTACCCCAATGCAGAGTCTTTGAAAGAGATTTGAATAAACCCAAATGAAACAGTGACAGTATGTTTCTCTGGTTAACATCTTCTATCAGAATGTTCAAAGTGCCTTCTGTCTTAAATCTCAAACCAAATATTTTGTGTGTTGAACTTGGGCAGAAGTGTCCTTCCTTCCTTTCTCAGCATGAAGTAGGAAACTTGCATTCTATAGAAAGGTTCTGTGTGGTCTTTTCATTCCTTAGATTGAGAAGGAGTCGCCATGTTTTTGCTTCTATTTCTGTTCATCATTACGTTAAGAAGAAACTGGTAACTACTGAGTGTTCTGCCTTCTTTTGTAGGGAGGGGACAGGCTCTGCTCTGTAAACCATAACGTGTAGAGTCATCAGCTGTCCAGCAGTTTCCAACCAACTGTCATAATTGATGCAGTGTACTCTTCTAGCCCAAGGCAGGTATCAAATTGCATTGTAATGTACTTTTAACCAGTTTAAACTAGTTTTGTAAGAGATATCTTAGTTCTGATTTCATCCAGGCTTATGTTTTTTCCCATGAATGTGAATATTTCAATGTCTGTTTTATTATGTATGTATTGTTCTTGTTTCTCTAAAGAACTCTAGAAAGTGTTGATTAGATGTCTGGTATTTATGGAGAAATGAGTTCTCTGGAGAACTGCACGATGAGCTCGTCTGGCAGCAGAGCTTCCCCTCTACCCAGCAGATCAGCAGTTCACTGCTTCTCTTTTCTCCACTAGTCTGGAGACGGCTTCACCGTGATGACATCATGGTATATATATATATAAACTCTGGTTGTGCTAAACAAGTTCCTTGTGTCCCCATTTAAAATTGTTCTTTGCCCTCCTCTGTCAGCGGAGTAGAGTTAAAGCTTGTCTCAATGTTGCGTTCTTGCGAACGCCTGCAGTTCTTTTGTGAGAAAACATCAGGGTGTTCAGCCGGACCCTTCAAGTTTTTCCTTTGCTTTTCTAAGCCTTGGGGACACCACTGTTGCAGTTGTAGAAAAATTGTTGCCACATTCCTACAACCCCAGAATTCATGTCCTTCTCACTGAGGGATGAACATGTGCTGCCTGAAATAACCACATGGTGATGCCCATCTCTCTAAGCAAAGAACCCCAATGCTGGTGTATGTGATTTGTTATTTTTCCCTGGGAAGAATTTAGGCTTCCCTCTACATCAGTTCTACCCTAGAAGAAGGGGAAAACCCCCTGTTAAAAGTCTGAGGGTTAGTAAGATTACTTCAGACTGAATATTTAAACATTGCAACATTATTAGCTACCAGTGTTGAAGAACAGGTGGGGGAAAATGTGAATTTCTGCTACTCAGTTTTCAAAATGATTTGTAACAGATGAAGCCTCTTATTTACTTGACAGTCCTATCATTTGAAGAAATAAGAGAAGTCGTGGTTACATGATAAATTTTAGGAAAGCTCAGTGGTTTGAAGGGTTTCATTTCATTTTTTTTTTCATTGCAGCTAGTTGCTATCAGTTGAGGATCAACTTCTGGTGAAGTGTCAGATTTAACTAGCTGTGTGCCCTGGGTGTATGTCACCCCTCCTTAAATCCATGACTTTTAAAGATGTTGATAGCATTGATTATTTTCATTCAGAGAGACAAAGATCTCTCATTTGATACAAGAGATCTTTGGAGCTCCTATGTATTATACAGGACCAAGACTACAATGAAATTAAAACTGTGAGTTGGCTTTAGTTTTCTTAGACTTCATTTAAGACTATCAGCAGAAGTACAAAGTTGTATCCAGCAAAGCTTGAGACCAGTAACTGCTGACAGATCTTACCCTGAACGTCAGTACTGGACAACTGCCAGCAAGAAACCCACTCTCATTTTTGGTAACCTATTTGGGAAAGAATACCTAATATTCAGCCTTCGTCCTCGTGTATTTTTCTGTATTTTTTCCCCAACGGGCAAGTTCTGGTGAAACACTGCTCTTTATGTATTTTAGGCAGCACTTACGAGTCCTAATTTGTGAGAACTACCCTTCAATAAATCAAGGGATGGGGGTGGGAGTCCAGGCGACTTGGTTAAACTTTTTTTTTTAACATATTAGCCCAGAAAAGGTAAAATGTTTTGTTATAAAACTGTATTAAGCATGGCCTAAGTATTAGGTGTATGATCTGTATAGTATGTTCCATCAAAAAATATTTATTACTAGTGCTTTAAGCTCCAGAGTAAACATTCATTTAAAATGGAGTTCACTGGGCAGATTTCCCCTTTAATATAGATAGAAATATTCTTTATCAGAGGTTTAGGACACAGTTTTGCTAACTGGTAAAAAACAAATGTAAATATGTAAGAATGTTTATTTGTTGCACATAACTTTTTTGGTATAAAATAAATGTAGAAGTTACCTGTGGAA EMBV3_26733 AAGGCATAACTGAGGGAAAAGTGCCTGGTCTCCACTGCCGATCACCACACCCGCAAGAAG Gene BVT0102_263949 - 1 EMBV3_34016 GK000025.2:877123-958030 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15142 TTTTCTTTTGGAGGGACATCGCTTTCTTCTCTGCCACTCAAGGCTGCCAACCTCAGGACA Gene BVV0102_450770 - 1 EMBV3_18329 GK000027.2:37415391-37422652 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155628 1 XLOC_094779 NonCoding TCONS_00155628 XLOC_094779 NonCoding NonCoding - 27:37419915-37422272 - TSS116405 1427 0.103714085494043 2 0.395161290322581 5.72068524795052e-05 0.000105624659295928 4.53945306049196e-05 0 0.00028370557554114 0.000406084930455368 2.86067924751388e-05 0.0002127689091651 0.000469979233639928 6.63163181020394e-05 1.60419374039654e-06 5.01147737785316e-06 0.000219167381592337 2.30749932360934e-05 0 1.85084588692148e-05 0 0 4.52265944031893e-05 4.0316326035412e-05 2.12735388591706e-06 3.12011543465636e-05 3.21444582514044e-05 0.000152726106487682 0.000131092353471908 4.93726055750147e-05 0.000447545105774557 0.000107696504847103 0 4.21321139899434e-06 XM_005226107.1 LOC514490 PREDICTED: Bos taurus protein kinase-like protein SgK196-like (LOC514490), transcript variant X2, mRNA. 0.0 2232 100.00 0.866152768044849 0 noncoding 0 0 0 0 0.0383432720458724 0.795196830234317 0.0134766685186949 0.790163470219588 TCCCGGAGCCGCGCGTGCAACCGGCGAGCGGCTAGGGGCTGCGGGCGAGAACGGGGGCAGCTGGCCCGCGTACTGCCCGGCGCCCTCGCTTGACTGGAGCCGACGGACACTCCGCCGGGACGGACACCTCCGGCAGAGGTGGTCGGCGCCGCGCTGCCCCTGCCTCCGGGGGCGGCTCTGAGTCCGGTGCAGTCGTCTGCTGCCCCCACTTTTAAAAAGCAGGGTTGAGCCGTGTTCTTTGGTGGTCTCGTCTTCTCCACCCTTGATCCCTGCTTTAGAACCTTAAGGCTAAGCAGGCATCCAGCATATTTAAAATAATTATATTGATGTGCCTGTGCTTTGTTGGCAACGTGGGGTACAACCAAAGTTGTGTTGTGGAGCACGAATTCGTTTCTTCTCTGGTTGTAAAAGATATTCTATAGATGGCAGAAACCAATTTTGTTCCATTGCTTTTCTTTTTCGTCACGCTTCTCCCTCCCACTGCCGTCTCTTTCTTTTTTAAAAATTAAGCTGTGAGTGTATAGCAGTAGTTTCCACTTTTCCTGTTACCAGTTTTTTATTATTATTGTCAGAAATCCAGTGTGCCTTAAGCAGTGCCTAATCAGTAGCTTTCGCTATCAGTTTGCTTTTTTCTGGGCAAGAACATTCCCTCAGCCATACAATCTTATCCCTTAACCCTGGGCAGCCTACTCCAGAAATATGCCTTTAAAACAAACAAACAAATCAGGTGATGGGGTGAGTGAAAGACTTCTTTAATAAGCAGATGGACAGTCTCAGGGTCTCAGCATGGGTCCCCTAATCCTTGCAGTGACCTAGCTGTATTCAGTTCAGTCCATTGTCTGAGGCTGTAGGATTTAGAGGAAGAATGTTAATTTGAGGCCAGAAAGTTTGACTTCTTTGTGTACAGTTTTAGTCACCTTGGGTAATTCGCTCTGCCTCAGTTTTTCTTATCTGTAAAATGGGGATAATAGCAGTTATATCTAGCTCACAGAATCCGTGTCAGACTGACACAAAATGGTAGCTGAACTTCTGGATGCGTGTCTTTCTGAGATGGGATTCAGAAGTGCTTGAGGGGACTTTGGGATCATTGAAAGGCTAGTGAGGCGCACGGCTGTCACGTGGACAAGAAATGCATTAAAAGGGTGATGAGAATCCAGCGCAGAGTCGAAGATGTGAACGTGTCCTGAGGTTGGCAGCCTTGAGTGGCAGAGAAGAAAGCGATGTCCCTCCAAAAGAAAACAAAAGGAGGGACTTGAGCCCCCACAGACGGTGTTCACGGGAGTCCTGGAACCAGGCCCCTGCGGTTACAAGGACAGCGCCGCTTGTGTAAAGCTTGGAAGCATTCGTGCGTTCTGTGTTGTTACTTGGGGGCACACATCTATGTGGTGAAAATAAAAAGCACGCGTGGAAACTGAACCTTGGGCAGG TCONS_00155629 TCONS_00155630 TCONS_00155631 s 5' 381 TCONS_00155629 TCONS_00155630 TCONS_00155631 s 5' 2737 EMBV3_13566 TCCTGGGGCCCAAATATTACTTTGTAAAGGAAGACTGCAGGGAAGGGTGTTCAGGGTGTG Gene BVT0102_320998 + 0 NULL GK000007.2:16132861-16153894 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215673 1 XLOC_131038 Coding TCONS_00215673 XLOC_131038 Coding Coding CDC37 7:16152166-16158081 = TSS161029 2859 2 TCONS_00215673_3 219 0.15879678209164 4 0.517247210010145 0.00661613274656936 0.00264664318003637 0.00216380582552545 0.00262045807389036 0.00292580943776047 0.00252045341493977 0.00184086923206456 0.000846784097655597 0.00177818122451994 0.00208111760133738 0.000462530103700629 0.0016246299565643 0.000477998989328992 0.00176907309542943 0.000940502148522036 0.00374269424468436 0.00171980273375214 0.00213793685610021 0.00218489765995596 0.00531751804180638 0.000231075406006917 0.00298071892523111 0.00246941409366644 0.00325708853118048 0.00569752961157344 0.00248001082176827 0.00296408802459606 0.000778135161728165 0.000789020402625421 0.00100353849159299 NM_001035338.1 CDC37 Bos taurus cell division cycle 37 homolog (S. cerevisiae) (CDC37), 0.0 975 99.28 0.192724728926198 NM_007065.3 CDC37 Homo sapiens cell division cycle 37 (CDC37), mRNA. 0.0 747 92.37 0.178384050367261 TCONS_00215673_3 sp|Q5EAC6|CDC37_BOVIN CDC37_BOVIN Hsp90 co-chaperone Cdc37; 9e-111 327 93.79 0.794520547945205 2 coding 0 0 0 0 -0.0321880530736263 0.81524467924234 -0.0282337614280913 0.562499134983095 AGGTGCCAACTGTGGAGAGCCTGGGGCCGGGGACAGGGCCAGGCTGTTCCCCAGAGTGACGGGCAGTGCCCAACCCTCAGGCCCGGGTGGAGCGCATGGAGCAGTTCCAGAAAGAGAAGGAGGAGCTGGACAGGGGCTGCCGCGAGTGCAAGCGCAAGGTGGCCGAGTGCCAGCGGAAGCTGAAGGAGCTGGAGGTGGCCGAGGGAGAGGGCGGGAAGGCCGAGCTGGAGCGGCTGCAGGCTGAGGCGCAGCAGCTGCGCAAGGAGGAGCGGAGCTGGGAGCAAAAGCTGGAGGAGATGCGCAAGAAGGAGAAGAGCATGCCCTGGAACGTGGACACGCTCAGCAAGGATGGCTTCAGCAAGAGCATGGTCAACACCAAGCCTGAGCAGGCGGAGGAGGAGTCTGAAGAGGTGAGGGAGCAGAAACACAAAACTTTCGTGGAAAAGTATGAGAAACAGATCAAACACTTCGGCATGCTGCGCCGCTGGGACGACAGCCAGAAGTACCTGTCAGACAACGTCCACCTGGTGTGTGAGGAGACAGCCAACTACCTGGTCATCTGGTGCATTGACCTAGAGGTGGAGGAGCCCACAGGATGCGAAGTACCACATGCAGCGCTGCATCGACTCAGGCCTCTGGGTCCCCAACTCCAAGTCCAGCGAGGCCAAGGATGGGGAGGAGGCGGGTACTGGGGACCCCTTGCTGGAAGCCACCTCCAAGTCAGGCGACGAGAAGGATGTCAGCGTGTGACCTGACCTGGCCGCCGCAGGCCCCTGTGTGCCCCTTTTCAGAAAACAAAAATAGATGCCATCTCCCCAGGTCCAGGCTTCCTCCGCTTTTGCTGCTCCCCAACCTAGCCCGGAGGGGCCCTCCCACGCCCCTTCCACCTCCCCCCTCTCCCCCAGCCCTCATCCAAGTCTTTGCTTTGAGTCAAAGGGGCTTCACTGCCTGCAGCCCCCCATCAGCATTAAGCCAAAGGCCCGGGGATCCAGGGAGGGGCAGAGGTTGCCAGGTTGGTCCATGGGGTGGGGGTGGGTCCCCAGCCAAGGGGCCTGCTCCAGTCACTGTGGGCTGTTTTCACTGTTTGCCCGAGTCAAGTCTTCTATATAGTAAACAGCAATTATCTTCCAATAAAGGATTTCAGATGCTCTGTGGGGCGTCACGAGGGCTGTGGGCACAGCTCTTCTCTTGGGGTTGGGAAGGGACCTGTGAGTGTTGGCAGTTGGGCCTGTGACACTCCTGGCTTTGCCCTCCAGCAAATGGGCTGTGTCCCCCATCCACACTCCAGGCTCTCCCATCACCTGGAACCCTTCCTGAGGTTACCTTTGGATCAGAGCTCTCACCCCACCCCCATGAAGTCTTTGGCTCCTCCCATTCTCCTAAGCCCCTCCCACCATCCATTTGGGAGCATCACCCTGCACTGTGTCTTACCTTCCCCGGGGCCAGCACTGCCTCCAAGATTGATCTTGAGTCTGTCCACTGCCCTTCACTCTCCACCCTGGTCCAGGACCCGTCACCTCTAGCCTGGACTCCTGTCCCCAGCCTCCTGTCTCCTCCACCCTCACTGGACCCCAACAGGCAGGGAGCGCCTGTGAACATGAGAGTCCCAGCACAGCCTGCCCCAGAGTAGAAGCCTAAGTCCTTGCAGCTCATGGGGCCCTGTACCATCTGCCTGGTCCCCTCCCTGCCCTCATCACCTCGTGGTCTCCCACTGCCCCTCTCACCAACTCCCTCCTCTCTGCTCCTTGAGCACTTTAAGCTTCTCCATCAGTGTGGCCTTGGGCAGCTTAATCAGCCTCAGCATTCATCTCTGTATAGTGATAGAAATGTTCGTGCCTTCTTCCCAGGGCTGTGATGAGGAATGAGTGAGATGAGCAGGTGCACATAGCACCTGGTACTCATGCTCAAGATCTGGGCCCCGGCATGTCCCTGTCCCACACCCTGAACACCCTTCCCTGCAGTCTTCCTTTACAAAGTAATATTTGGGCCCCAGGAAAGACTTAAAGAATAATATCATAAACAAGGACACAGTTTTTAAGACCTGAAGTAATTGAGAATCCAGTTGAAGCCCACTACCCGCCCCTTCTGGGGGACATCACCACCTGGCTGGTGCTTCTCAGTCTGACCAGAGCTCTGGTCCCTCCTGGAAGCTTCCTTGACTCACCTTCTGAGTCATCCCTCACATCCAGCCATGTTGCTTCTTCACCTGCCTGGCTTTGCCAACCTGTGTATTGCTGTCTCCTTTATGCTGTGAGCACCACCCAGACACAAACTGAGTCTTGGTCCTAAGATGATCCCGGCCACCCTCACAGATTCTGGCCCTCAGTGAATGCCTTTGTGCCCAAGGTGATTGCCACCAGAGGGCAGTAGTGAACTGCAAACAAGTGGTGTTGCCCGATGCTTTTCATACAGATTGAAATGGCAGACTTCCCTGGTGGTCCAATGGTTAGGACTCTGTTCTTCCAGGTGGGGTGGGGGATGGGGTGGATTCAATCCCTGGTCAGGGAGCTAAAATCCCATACGCCACATACATGGCTGAAAAATAAAGATTTTAAAAGTATTTAAAAATGGCAGATCAGAGGATTGGGGAGACCCTCCTAAACCTCGTTTATCTGAGATCAATTCAAAATTGTGAGCTTTTTAATTCTTTACCATGAAAACTTTCAGAGGTAGAATCTGTATTTCTGGTATTTCCTTTCACCTCGGCGTCCAGTACAACTCAGCACTGCTGTTACTGATCCTTGACTTAAAATTTCAATATTTTGTTCATCATGGATTTTTTTTCACATTAATGGTGTTTTTGGAAAATATTACATTAAAATATTTATCTTGATTACTGAGTTGGTGACCTCTTTGCTT EMBV3_16799 GAGAGGAGCTTTAGGAGAACTGGATTTTGTGAGGATCCAGAATCATTCCTGTGTGCCTGC Gene GeneID:509005|LOC509005:XM_002685951:148_cdna Constitutive 0 NULL GeneID:509005 3 GENE LOC509005 NULL CD1b molecule-like EMBV3_34078 TGACAAGTCCAAAATCTGCAATGTGGGCTGACAAGCTGAAGACCCAGGAGAGCCAAAGGT Gene BVV0102_153670 + 0 NULL GK000028.2:7880011-7926958 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21522 TGGATGACGACACTTGGAGGGGTCCGTGTGCAGAGGTTGCCCCGAGACTTTACTGGGGAT Gene BVT0102_270999 + 1 EMBV3_24813 GK000004.2:64415415-64482710 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25359 GTGATCAGTTTGAATCTATTTGGTGGGATGAGAGAGGCACATGTATAGTGATCCACGAAG Gene GeneID:786340|LOC786340:XM_002694664:204_cdna Constitutive 0 NULL GeneID:786340 17 GENE LOC786340 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_33892 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29466 GCCTGAGGACCATGTGTTCATTTCCACCCCCAGTATCAACTACACAAGCCGTGACATGCA Gene GeneID:510960|LCAT:NM_001046069:195_cdna Constitutive 2 NULL GeneID:510960 18 GENE LCAT MGC137397 lecithin-cholesterol acyltransferase EMBV3_10747 GGGTAGAATAGACAGGTTTGATCTATGTTTCTTGTGATGGTGGCTTGTATCGGGAGGACG Gene GeneID:535365|GNB5:NM_001099070:89_cdna UTR3_Alt 2 NULL GeneID:535365 10 GENE GNB5 MGC142963 guanine nucleotide binding protein (G protein), beta 5 EMBV3_10462 CTAGACCATTTTTCTCACACCAGAAGAGCCTTTCCACAGTGGGGATGGAAGCACAGTAGG Gene GeneID:618141|ZNF3:NM_001046614:329_cdna Constitutive 2 NULL GeneID:618141 25 GENE ZNF3 MGC128512 zinc finger protein 3 EMBV3_09930 GCTGGAGAACGGAGAAAGAAGGTGCTGGCAAGGCGGCGGTGGTGTTCGTAGTGGTGCTGA Variant GeneID:526844|DOLK:NM_001035365:139_cdna 201^365 1 EMBV3_18760 GeneID:526844 11 GENE DOLK TMEM15 dolichol kinase EMBV3_13887 TTTGCTGACTGGAATGATCAAGTCTCTCCACCTGTAGTCTGAAGATACCCTTTTGGTTGG Gene GeneID:532015|ELOVL4:NM_001099050:5_cdna Constitutive 0 NULL GeneID:532015 9 GENE ELOVL4 NULL elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 EMBV3_03198 CCCCGTTTGGACTCTTAGCCACACAAGCAACCACCAAGGATGCCTTCTCCCAGAATGTCT Gene GeneID:510083|LOC510083:XR_084630:33_cdna Constitutive 0 NULL GeneID:510083 20 PSEUDO LOC510083 NULL similar to dedicator of cytokinesis 2 EMBV3_41024 CAACAGTACACTGGCAACTATTCAAGCTCTTGCTTCTGGTGGCTCTCTGCCAATAACGTC Gene GeneID:512840|POU2F1:NM_001075582:17_cdna Constitutive 0 NULL GeneID:512840 3 GENE POU2F1 MGC142534 POU class 2 homeobox 1 EMBV3_01521 AGGATCTGGCCTTGCAGCCAGGAGACACCGTGGATGTCCTGTGTGAAGTGGACCAGGCGT Gene GeneID:523157|NOXA1:NM_001102075:74_cdna Constitutive 0 NULL GeneID:523157 11 GENE NOXA1 MGC155072 NADPH oxidase activator 1 EMBV3_42340 GGAGGACCTGGCTGCCCTGGAGAAGGATTATGAGGAAGTGGGGACTGATTCATTTGAAGA Gene GeneID:768036|TUBA8:NM_001077095:118_cdna Constitutive 0 NULL GeneID:768036 5 GENE TUBA8 MGC137937 tubulin, alpha 8 EMBV3_37372 AAACTCCTAGAGGAGAACATAGGCAAAACACTCTCCGACAGAAATCATAGCAGGATTCTC Gene BVT0101_010485 + 1 EMBV3_05634 GK000030.2:75265103-75445124 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070843 TCONS_00122697 TCONS_00048374 TCONS_00079060 TCONS_00029764 TCONS_00040746 TCONS_00152649 TCONS_00224115 TCONS_00022062 TCONS_00197400 TCONS_00251849 TCONS_00122315 TCONS_00107793 TCONS_00115689 TCONS_00122309 TCONS_00057034 TCONS_00189810 TCONS_00250201 TCONS_00063148 TCONS_00188851 TCONS_00221242 TCONS_00249712 TCONS_00252227 TCONS_00122645 TCONS_00229388 TCONS_00238382 TCONS_00063105 TCONS_00010473 TCONS_00251752 TCONS_00091220 TCONS_00250933 TCONS_00238325 TCONS_00178132 TCONS_00209712 TCONS_00009163 TCONS_00252222 TCONS_00006307 TCONS_00251853 TCONS_00206864 TCONS_00047824 TCONS_00039626 TCONS_00238762 TCONS_00075206 TCONS_00206878 TCONS_00218884 TCONS_00073906 TCONS_00232986 TCONS_00242614 TCONS_00116901 TCONS_00199805 TCONS_00222787 TCONS_00057989 TCONS_00007787 TCONS_00250261 TCONS_00241769 TCONS_00091759 TCONS_00031819 TCONS_00199036 TCONS_00091663 TCONS_00007086 TCONS_00063079 TCONS_00162841 TCONS_00107112 TCONS_00070984 TCONS_00218937 65 XLOC_042620 XLOC_074252 XLOC_028506 XLOC_047945 XLOC_016021 XLOC_024560 XLOC_092414 XLOC_137411 XLOC_012733 XLOC_119061 XLOC_154790 XLOC_073870 XLOC_063703 XLOC_069858 XLOC_073864 XLOC_034835 XLOC_115847 XLOC_153144 XLOC_037875 XLOC_114892 XLOC_134558 XLOC_152655 XLOC_155168 XLOC_074200 XLOC_138883 XLOC_145049 XLOC_037832 XLOC_006024 XLOC_154693 XLOC_055996 XLOC_153876 XLOC_144992 XLOC_107905 XLOC_128223 XLOC_004719 XLOC_155163 XLOC_001870 XLOC_154794 XLOC_125384 XLOC_027956 XLOC_023443 XLOC_145429 XLOC_046513 XLOC_125398 XLOC_132203 XLOC_045666 XLOC_142468 XLOC_149277 XLOC_071067 XLOC_121457 XLOC_136094 XLOC_035786 XLOC_003347 XLOC_153204 XLOC_148433 XLOC_056531 XLOC_018064 XLOC_120689 XLOC_056436 XLOC_002648 XLOC_037806 XLOC_099722 XLOC_063023 XLOC_042758 XLOC_132256 Coding TCONS_00007086 XLOC_002648 NonCoding NonCoding - 1:37454848-37455334 - TSS4163 486 2 TCONS_00007086_2 48 0.796296296296296 1 0 0 0 0 0 0 0 0 0 0 9.4067056350201e-07 1.57008762283997e-06 1.22622928375616e-06 0 0 0 9.82735425465441e-05 0.00803934631566828 0.000160045067891931 0 1.12099833122423e-05 0 1.65412690339641e-05 3.83824073258849e-05 2.15594454874111e-05 1.58401441150031e-06 0 0 0 0 0 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 9e-93 343 80.05 0.792181069958848 NM_020729.2 ODF2L Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), 3e-41 172 70.18 0.796296296296296 0 noncoding GTTTCCTTTGATGTGCAGAAGCTTTTAAGGTTAATTAGGTCCCATTTGTTTATTTTTGCTTTTATTTCCAATATTCTGGGAGGTGGGTCATAGAGGATCCTGCTGTGATGTATGTCAGAGAGTGTTTTGCCTATGTTCTCCTCTAGGAGTTTTCTAGTTTCTGGTCTTATGTTTAGATCTTTAATCCATTCTGAGTTTATTTTTGTGTATGGTGTTTGAAAGTGGTCTAGTTTCATTCTTTTACAAGTGGTTGACCAGATTTCCCAGCACCACTTGTTAAAGAGATTGTCTTTAATCCATTGTATATTCTTGCCTCCTTTGTCAAAGATAAGGTGTCCATATGTGCGTGGATTTATCTCTGGGCTTTCTATTTTATTCCATTGATCTAGTACCAAATAGCTGCACTCTATCAAGACACACATATGCAACTGTTTATTTACTTGACTCTATTTCTTACAAGATGGTAAATATCATGAGATCAGGTAC TCONS_00000351 . 3' 331386 TCONS_00000351 . 3' 331871 EMBV3_14523 TTCTCCACCTGTGGCTCCCACCTCACCGTGGTGTCTCTCTTCTATGGGACAATTATAGGT Gene GeneID:515540|LOC515540:XM_002695696:276_cdna Constitutive 0 NULL GeneID:515540 19 GENE LOC515540 NULL similar to olfactory receptor 376 EMBV3_14258 CGGCTGCTCACCTCAGGCTATCTGCAGCGCGAGAGCGACCACATCCACATCATCGCGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39790 AAAATATCCCTTGAACCAGAACAGATTCTCAGATACGGCAGAGGGATTGCCCCGCTCTGG Gene GeneID:512079|PDCD2:NM_001046109:2_cdna Constitutive 1 NULL GeneID:512079 9 GENE PDCD2 MGC134365 programmed cell death 2 EMBV3_06982 CCACCGTCTCCGGAATCTCGCTCTGCCCTGGTACAAAGAATTTTACGTGAAAGATTTTGT Variant GeneID:529245|ORC4L:NM_001046301:106_cdna 86^219 5 EMBV3_21543 GeneID:529245 2 GENE ORC4L MGC133948 origin recognition complex, subunit 4-like (yeast) EMBV3_30301 TGGCTCAGTGGTTCGGTATGTGCAGTTGCCAGCAGATGAAGTCGACACACAGTTGCTACA Gene GeneID:538662|LSM2:NM_001101177:168_cdna Constitutive 0 NULL GeneID:538662 23 GENE LSM2 NULL LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_04724 GAGTATACCTTAGCTCTGCTGCTACCCAAAGCTCACATTCAAGTGCAACGGCCTCGGTGA Gene GeneID:512488|LOC512488:XM_002688659:53_cdna Constitutive 0 NULL GeneID:512488 7 GENE LOC512488 NULL similar to CfOLF4 EMBV3_02790 TCGTCCTGCTCTGGGTCATCAAGGCATCTCCAGCGGCCATTGTCTTTCCTATGATGGTTT Gene GeneID:537901|SLC4A8:XM_002687293:199_cdna Constitutive 0 NULL GeneID:537901 5 GENE SLC4A8 NULL solute carrier family 4, sodium bicarbonate cotransporter, member 8 EMBV3_39975 GTTTTGCATATATTCATTGCTTCAACATTACTGGACAATCAGGAAGAATACCATTAGCTC Gene GeneID:767944|ATPBD4:NM_001077016:109_cdna Constitutive 2 NULL GeneID:767944 10 GENE ATPBD4 MGC128665 ATP binding domain 4 EMBV3_41243 AGACAGCAATGCCCCCATGACTGTGGTGGGAGGAGGACTCTTGGGAGGTAAGCTGCTTGT Gene BVV0102_113039 + 0 NULL GK000021.2:71387572-71390595 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20114 CTGCGGCGCCTTCTACCTGCCGCTTGGCGTGGTGCTGTTTGTCTATTGGAAGATATATAA Gene GeneID:523484|LOC523484:XM_002685427:26_cdna Constitutive 0 NULL GeneID:523484 2 GENE LOC523484 NULL similar to serotonin receptor EMBV3_07323 GTAAAAAATCCTAGTATCAGCTGTTATTTTTTGCTTTGTCACATTTAATTTCTGTGCTCC Gene GeneID:100125306|COG5:NM_001103339:2_cdna Constitutive 1 NULL GeneID:100125306 4 GENE COG5 MGC157282 component of oligomeric golgi complex 5 EMBV3_26721 TGGAAATGGGCAGGCGTGCAGAACTTACAAAGAGCATCTGGAGGGAGGAAACAAACACGT Gene BVT0102_084739 + 0 NULL GK000021.2:13573236-14138516 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120505 TCONS_00120506 TCONS_00120507 TCONS_00120504 1 XLOC_073191 NonCoding TCONS_00120505 XLOC_073191 NonCoding NonCoding - 21:14081350-14083274 - TSS89984 1565 2 TCONS_00120505_1 64 0.0926517571884984 3 0.187727509100364 0.00029791197980809 0.000369392688844119 1.43318492069872e-05 9.79042627296876e-06 0.000440092361679573 0.0001661776254611 0.000627381411837147 9.82623247051572e-05 0.000161621671167459 0 0 5.65140540670434e-10 9.33205700257474e-07 0 0 0 0 0 6.33930325547494e-05 7.35208092065925e-05 1.93838686491554e-06 0 0 0 0.000144479546643894 1.38383454942954e-10 0.000271742599363073 0 0 0 0 noncoding TTACCAGAAGTCGAGCTTCTGGGAAGAAATAAAGGGATCATAGGCCCTGCGGTCAGCCCAGTGTGGACTCAGAGGTTCAGATTCATGTGTGGGGTTCTTCCGGTCTGCCCAGAAGTACTCTGAACACCCCAAACAAGCAAACATCTCAGCTCCAGGTCTGAGGAGGGGATTGTCTTTGAAGTGGTTCAATTAAGATGGTGTGCATGTCCCCTAAGACCTGGAAATGGGCAGGCGTGCAGAACTGACAAAGAGCATCTGGAGGGAGGAAACAAACACGTCTAAATTATTATCAGATCTGAGCTGCCTCACAGAAGGGACTCAGGAACCCTTTGGCATCCCTTTGGGAAGATGGCTGCCTCAGACGCTTCTGTTCCAAAGTCTTGTTTCCAGAGGAAACTGTGACCACCTGGCTTCCTAGCAGGGGACTCAGTCTACCTGGCTGTGGGGTTGCTTTGTCCTTCTCAGTTCACTCTTGGAGTCTTGGAGCAGAGGTCTTGAAACAGGAGGAACCCCCTGCTCCCCACAAAACCCTGCCCTGCCCCCAGCCAGTACCACGGAACATCTAATGTCAGATAGAACATGCTCCTGTTGCAGGCTTATCAAGGAAACCTAAATGTCTGGGGATCACTTAAGTCTCTGAGCAACAAATGGAGGATGCTTGCGGACTTGGAAAGAGTAGCTTGCCCATGTGTATACTCCCTTAATCTCTGACAATCCACAGCGCTGGGTTGAAAAGACAATTGGTATTCTCTCCCCTCTTCTCCTCCTTCTGAGGTTTCCTTCCATGCAGTGATGTGAAGAGTAGGTAAAGGGGGCCCTCATGGACTCTTGGACACAGTTGATTCATTGGGATCACCGTGAAGCCAGAGGGAGAAAGGCACCTTACCAGGAAGTGTTGAGCAAGCAAGCTCAGTGGAAGTGTGTTTTGTTTTGTTTTTTTTACAGTTAAGACCCTCCTCAGAGAAAGACTCTCCAATTTGCACATGCTACTTCCCAAACTCACTTCTCCCCTCTCACTTTGTCTATAATTCCTGCTTCTTCATGGATACATACTCTTCTTGCTGACTGAGTTATGTTCTTTAAATTCCACTCTCTCAACTCCACTTTTACCCAAAATATCACACACAAGATATTTCCAAATATACCTGTCTACCTCCAGGGCCACTTAGAAGATCAAATGTTCTCAAACATACTTAATCTAAAGCTTTCCTCTCATTTGAGTGGCATGCATTTCCCCCTTTAATCAGTGCTACTAACGGGGTTGGCGAGAATTCTAGGAAAAGTGCTAAGATCCCAAGAGCATCTGTATTGTTACTGCACAGATCTAAGTCCAAGTGTGAGCTCTGCCACCACAGAGCTATGAGGCTAGAGGTCTCAGAGCCTCAGCTGTTACACCACAAAACTGAAGATAATAATAATGCCCTCATCACAGGGGTGTTGAAAGGATTAGGTAAAGATGACAAATGCTATTTCTAGCATGATATCTGTTATGTCCAAACTTCTAAGCAATTTGAGTTCCTCTATTTCTTTGGAGGAACTAGCTTGCTAAACACATAAAGCCCCAC TCONS_00118681 r 5' 245965 TCONS_00118681 r 5' 245412 EMBV3_29076 AGGATACAGACCTAATGACATTCAACATCTCTGTGCATCGGTCATGGTGGCGGGAACACG Gene GeneID:788352|NKAIN3:XM_002692693:103_cdna Constitutive 0 NULL GeneID:788352 14 GENE NKAIN3 NULL Na+/K+ transporting ATPase interacting 3 EMBV3_21754 CCCTCCGAGCCGCCGTACTGTTTCCCGGTGGGCGTGTGCCGCTTATGGAGGGAGTGTGTG Variant GeneID:536605|FBXO22:NM_001099074:124_cdna 77^239 1 EMBV3_42548 GeneID:536605 21 GENE FBXO22 MGC157370 F-box protein 22 EMBV3_37773 CATCTTCCCATCCAGACAGCTGAGCTCGCTCCGGAAGCCCGAGGGCATGGATGGGCCTCA Variant GeneID:538690|ID3:NM_001014950:239_cdna 363^476 4 EMBV3_08785 GeneID:538690 2 GENE ID3 NULL inhibitor of DNA binding 3, dominant negative helix-loop-helix protein EMBV3_15780 ACCTTAGAGCTGAGGAAACTGGTACTCAGAAACCGGTACTGCCCTGAGGTTATATTGCTG Gene BVT0102_347683 + 0 NULL GK000009.2:671884-749440 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00173 GCTGAGCCCTTAACCTTACTGTAGAGACTTCCGTCGCCCTCGGTAGAGTTTATTTTTGTG Gene GeneID:516210|CKB:NM_001015613:247_cdna Constitutive 1 NULL GeneID:516210 21 GENE CKB NULL creatine kinase, brain EMBV3_20537 GCACAGAAAGAGACTGCACAACACGATAGCGCTGGGGAGGCATCTGGCGTCACGGCTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11071 GCACACACTGTTTCCTGAAGGGTTTGTCTGTGAACTTGCTCCCATGGACCGCTGTATCCT Gene GeneID:510242|C16orf5:NM_001014892:117_cdna Constitutive 0 NULL GeneID:510242 25 GENE C16orf5 MGC127651 chromosome 16 open reading frame 5 EMBV3_09154 TGTCAGTCCAGAAAGACAGATGAAGACTAACCCCTGCCAACAACCCCCAGATGCTTGGAA Gene BVT0102_090448 + 1 EMBV3_06721 GK000019.2:33650142-33673395 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096384 TCONS_00096383 1 XLOC_057959 NonCoding TCONS_00096383 XLOC_057959 NonCoding NonCoding - 19:33665777-33672753 - TSS71644 559 1 TCONS_00096383_1 36 0.497316636851521 3 0.920286738351255 0 0 3.31089686314922e-05 2.24623800513431e-05 0.000132482512837591 0.000199801671403672 0 0 6.74012518684758e-10 0 0 0 0 0 0 0 0 0 2.57480320598075e-07 0.000823348323216476 1.08612869281244e-05 0 0 5.99809427861592e-05 0 3.78110398697634e-05 2.32425295468687e-09 0 0 0 NM_001105482.1 AARSD1 Bos taurus alanyl-tRNA synthetase domain containing 1 (AARSD1), 6e-20 102 81.73 0.184257602862254 XR_246721.1 LOC101927528 PREDICTED: Homo sapiens uncharacterized LOC101927528 (LOC101927528), misc_RNA. 3e-11 73.4 75.59 0.21824686940966 0 noncoding AGCGGGCGCTTAGCTCGTGCGGGATCCCGCGGACACACAAGAGAGCAAACGGCAGAACCGAGATATTGCAAGTCCCGCACTCTGTCTGCACGTGGCGCTGCTGAGGCGTCCCACCTAAGACACTCCAGTGAGAGTCCTCCTTGCTGGCATTGGTGAAACAAGTGTGATGGGAAATCTGCAAGACAAGAAACTGTCAGCCCAGAAAGACAGATGAAGACTAACCCCTGCCAACAACCCCCAGATGCTTGGAAGTGGATCAACCCTAGTAGAGTCTTCACATGAGAAACCAGTCTTGGCTGACACCTTGACAGCCTCACTGCAAGGACCCAGCTAAGCTGTGCCTGGACCTTCACCCACAGATACTCTGTGCTGTGTGACATGTGGCCTCTTAGTTCCATGACCTGGAATGGAACCCGAGCCTGCTGCATTGGAAGTGCAGAATCTTAACCACTGGACTGCCACGGAAGTCCTCAATATTTTATTATCTTTAATTCATATTTTATTGTATTATTCTTAATGAAGTTGGATGTTTTTTTCATATCTTAAAATATTTTCTAAT TCONS_00093296 r 5' 6925 TCONS_00093296 r 5' 144 EMBV3_32375 CGCCTTTATGCGCAGTATTTCCAAGGAGATCTAAAGCTCTATTCCCTAGAGGGCTATGGG Gene GeneID:528655|PDK1:XM_002685323:183_cdna UTR3_Alt 3 NULL GeneID:528655 2 GENE PDK1 NULL pyruvate dehydrogenase kinase, isozyme 1 EMBV3_38594 AGCCAGCGTTCTCCCTGTGCTGCTCAGCCCTGAGCTCTGTGTCTGCCTGGGGACGACTAA Gene BVV0102_216900 + 0 NULL GK000025.2:484173-493354 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144046 TCONS_00144044 1 XLOC_088439 Coding TCONS_00144046 XLOC_088439 Coding Coding SOLH 25:478494-485426 = TSS108240 4669 1 TCONS_00144046_3 1071 11 0.327946905208484 0.00119475641276956 0.000326476549746355 0.00033097370744247 2.71290552813882e-05 1.42860476251602e-05 0.00016088550490867 0.000242296074743689 5.19167054837261e-05 0.00037684664734316 2.64291728736093e-05 6.37248090583615e-06 0.000219028861230935 1.96651686227805e-05 5.94041846316397e-05 3.79112745365537e-05 0.000326293710154491 1.08689317897315e-10 3.22341429249491e-05 0.000266708532215271 0.00015401565827643 0.000172624413417097 2.60461611191727e-05 8.80862519522688e-05 0.000599635034937698 0.000234461620071101 0.000194655847847522 0.000455474620357908 3.5411804501216e-05 7.01825779733989e-05 2.28852332052621e-05 XM_005224583.1 CAPN15 PREDICTED: Bos taurus calpain 15 (CAPN15), transcript variant X2, 0.0 8421 100.00 0.999785821375027 XM_005255513.1 CAPN15 PREDICTED: Homo sapiens calpain 15 (CAPN15), transcript variant X1, 0.0 3618 81.36 0.771685585778539 TCONS_00144046_3 sp|O75808|CAN15_HUMAN CAN15_HUMAN Calpain-15; 0.0 1809 84.48 0.99906629318394 2 coding 1 1 1 1 -0.0363032822054924 0.807846968656612 -0.00638434400831926 0.899573409685877 ATGGCCACGGTCGGGGAGTGGGCCTGCGCACGCTGCACCTTCCTGAACCCAGCCGGCCAGCGCCAGTGCTCCATCTGCGAGGCCCCGCGGCACAAGCCCGACCTGGACCGGATCCTGCGGCTCAGCGTGGAGGAGCAGAAGTGGCCGTGTGCCCGCTGCACATTCCGCAACCTTCTGGGCAGGGGGGCCTGCGAGATGTGTGGCTTCACCCCCGAGCCTGGCCCAGGGGCCTCCCCGCTGCCCATCATCAACGGGGTGCCCCCAGAGCCCCCGGGCAGCTGCCGGGACGAGGCGGGGCCCCTGCGGACAGCGGGGCCGGTGGCTGTGGAGCCGGCAGGTGGACGGCCGGCGGAGGCGGAGGGGCAGGAGGGGGGCGCGGCTGCGCCTGGGAGCGGCTGGGCCTGCCAGCGCTGCACGCTGCACAACACGCCTGTGGCCAGCTCCTGCTCGGCCTGCGGGGGGCCCCGGAAACTCTCGCTGCCCAGGATCCCTCCCGAGGCACTTGTGGTCCCGGAAGTCATGGCTCCTGCAGGCTTCCCCGGCACGTCGGCCCCCGCCCAGCCTGGGGAAGGCGCGGAGGCCAACACTCCTTCTGCCGTGGACCAGGAGCCCCCCCGGGGGCCACCCTTCAGCCCGTTCTCGCCCACCCTCCAGAACAACCCCGTGCCTCGCAGCCGCCGCGAGGTGCCCCCCCAGCTGCAGCCACCGGTGCCTGAAGCCGCCCAGCCCTCACCCTCTGCCAGCTCCAAGGGGCCCCCCCAGGGCCTGGGGCGGCCCACGACCGGGGCCTCCCGCCTGGCGGAGCTGCTGTCAGGCAAGCGGCTGAGCTTCCTGGAGGAGGAGGCGGCCGAGGGAGGCCCCACGCTGCGCCCCCCGGGTCCCGCCAGCCCTGCACACTGCGAGGCTGGCAGCAGCACACCAGGCAGCGACGTCATCGACCTGGGCGGTGACAGCGTGCGTTACACGCCGGCCAGCCCCTCCAGCCCCGACTTCACCACCTGGTCGTGTGCCAGGTGCACGCTCAGGAACCCCACGGCGACCCCCCGGTGCACGGCGTGCGGCTGCTCCAAGCTGCACGGCTTCCAGGAGCACGGTGACACCACCGCCCGCTGCCCCGACTGCAGTGCGGACCGGCCCGGGCCCTGCCCAGCCCACAAGGCCGGCCGCCCCCTCCCCGCAGCGCCATCTGAGCGCCCGGGCCAGTGGGCCTGCCCCGCCTGCACCCTGCTCAACGCGCCTCGGGCCAAGCACTGTGCCACCTGCCACACCCCCCAGCTCATGGCGGCCCAGCGCCGGGGTGTGGCGCCCCTGCGGCGCAGGGAGAGTGTGCTCGTGGAAAAGCGGCGGCAGACGGACGAGGGCGAGGCCAAGGCCCTGTGGGAGGACATCGTGGCCTTCTGCCGGGAGAACAGCGTGAACTTTGTGGACGACAGCTTCCCCCCTGGGCCTGCGTCTGTGGGCTTCCCCGTGGGTGACAGTGTCCAGCAGCGCGTGCGTCAGTGGCTGCGGCCGCACGAGATCAATTGCTCCGTGTTCAGGGACCACAGCACCTCCTGGTCTGTGTTCCACACGCTCCGGCCCTCGGACATCCTGCAGGGTCTCCTGGGGAATTGCTGGTTCTTGAGTGCGCTGGCAGTGCTGGCTGAGCGGCCGGACCTGGTTGAGCGGGTGATGGTTACGCGCAGCCTGTGTGCAGAGGGTGCCTACCAGGTGCGGCTGTGCAAGGACGGCACGTGGACGACGGTGCTGGTGGACGACATGCTGCCCTGTGACGAGGCCGGCTTCCTGCTCTTCTCCCAGGCTCAGCGCAAGCAGCTGTGGGTGGCCCTCATTGAGAAGGCGCTGGCCAAGCTGCACGGCTCCTACTTCGCGCTCCAGGCCGGGCGTGCCATAGAGGGCCTGGCCACGCTCACCGGTGCCCCCTGTGAGAGCCTGGCCTTGCAGGTCAGCTCCACGAACCCCCGCGAGGAACCGGTGGACACTGACCTCATCTGGGCCAAAATGCTGAGTTCTAAAGAGGCTGGGTTCCTCATGGGTGCCTCCTGTGGTGGGGGCAACATGAAGGTGGACGATGCTGCCTACGAGAGTCTAGGCCTGCGTCCCCGCCACGCCTACTCCATCTTGGATGTCCGGGATGTCCAGGGCTCCAGGCTCTTGCGCCTACGGAACCCATGGGGCCGCTTCTCCTGGAACGGCAGCTGGTCAGATGAGTGGCCACACTGGCCGGGGCACTTGCGGAGTGAGCTCATGCCGCATGGCAGCAGCGAGGGTGTCTTCTGGATGGAGTACAGCGACTTCGTCAGGTACTTCGACTCCGTGGATATCTGCAAGGTGCACTCGGACTGGCAGGAGGCGCGGGTGCAAGGCAGCTTCCCCAGCTCGGCCAGCGGGCCGGTGGGTGTGACGGCCCTCACGGTGCTGGAGCGTGCGTCCCTGGAGTTTGCCCTCTTCCAGGAGGGCAGCAGGCGCGCGGACTCAGTGGACAGTCACCTCCTGGACCTGTGTGTCCTGGTGTTCCGGGCCTCCTTTGGCAGCGGTGGCCGCCTGAGCCTGGGCCGCCTGCTAGCCCACAGCAAACGCGCCGTGAAGAAGTTCGTCAACTGTGATGTGATGCTGGAGCCTGGCGAGTATGCCGTGGTGTGCTGTGCCTTCAACCACTGGGGCCCCGTGCCCGGCCCACCCGCCCTGCAGGCCTCCAGCCCCTCAGCGGGGGCCCCACGCAACACCCCAGAGGCGCCCGGCCATGTGCTGGCCGTGTACAGCTCGAGGCTCGTCATGGTGGAGCCCGTGGAGGCCCAGCCGACCACCCTGGCCGACGCCATCATCTTGCTCACGGAGAGCAGGGGCGAACGGCACGAGGGCCGCGAGGGCATGACCTGCTACTACCTGACGCACGGCTGGGCGGGGCTCATCGTGGTTGTGGAGAATCGGCACCCCAAGTCTTACCTGCACGTACAGTGCGACTGCTCCGACAGCTTCAACGTGGTGTCCACGCGCGGCAGCCTGCGCACCCAGGACAGCGTGCCACCCCTGCACAGGCAGGTCCTGGTGATCCTGTCTCAGCTGGAAGGAAATGCTGGCTTCTCTATCACCCACCGCCTGGCGCACCGCAAGGCAGCACAGGCCTTCCTCAGTGACTGGACGACCTCCAAGGGCAGCCACAGCCCCCCACTCACGCCCGAGGTCGCTGGCCTGCACGGGCCCCGGCCGCTGTGACCTCCTTGCCCCCACCTGCCTGCCCCCACACGCACTTTATGAGGGAGACCCCAACACAGGACGCTTGAACCACAATCTCAGGACCCCCACCCAGGGAGCTCCAGCTGTGGGCACAACTCCCCCGGCCCTCCCCCCACCCCTCCCTCCTGCCCAGGGCCTCCCAGCCACCCAGCAGATTACCTCGAACCCACCTCCAGCTCTAGGGGGACATGTGCCAGCCTCTCGGACCAGGCCACCTTGAGATCTGGCTCCAACCTCCAGGGTCAGGGTGAGGCTGCTCCTTATCCATGGGCCCAGGTCTCCTGCCCGGATCAGGCAGCCATGTGCTCCAAATCCAAATCTGGGCAGGTCAGAGGCCAGGACCCCAGAATGAGAGCAGGGACCGCCCTTGTCGTAGGGGTCAGAGGTCAGGACTCCAGGGTGAGAGCAGGGACCATTTCTGTTTTGTGATCAGAGGCCAGGACCCTGAGGTGAGCAGGGACCACCCCCTTGTTGGGTCAGGCCAGGACCCCAGGGTAAAAGTAGGGACCACCTCTATTTTAGGGGGTCAAGGCCAGGGCCCAAGGATGAGAGCAGGGACCACCCCAGTTTGGGGAGGTCAGAGGTCAAGACCCCAGGGTGAGAGTAGGGATACCCCTTTGTGGCCAGAGGTTGAGAACCTTTCCTCAGTTTGCCCCCATATCCCACCTATCCGCCCCACCCCCCGCAAGCCCTCATGTGGCCAGCAGGGGTCCCTGGAGCCCCAGCAGGGTCCGAGGAGGCAGGTGCCTGGCAACTGTGGGCTGAACCAGGGTGGGGAGGGACACTATGCAATTCCTGGCATGCCAGCCAGGATCGAAGCCATGCCCTGGGCCGGGGCTGGGGTGGTGGTCAGGTGGTCCTGGGCCCAGCCCCGTGCTTGGCACCACCTGACCTGCAGGAGAAGCAGAGTCCCAGAGTCCCCCAGGCCGTGTCCAGGCACATGCAGGGTGGGCCCCAGCCCCGCACCCCTCCCCCCTGAGCCAGCGTTCTCCCTGTGCTGCTCAGCCCTGAGCTCTGTGTCTGCCTGGGGACGACTAAGGCCGCTTCCTGGGTGCCCAGTTCACTGCCCAGCAGCCCCTGGCAGCGAGTGCCCTGCCCGTGGTCCCTCGCTTTCCGTGGGGCTTGCTGGGTTGGGGAGGGGCAGATTCACGCCTGGAGAAGCACTAGGCCCCAGCCCCCTTTGTACTCCTTCCGTTACTCTGAGTGGGGGGTCGCCCCTGGAGAAGCACCAGAAGCACTAGACCCCCACACCCGCCCCCTTTGTACTCCTCCTCGTACTCTGAGCTGTGAGTATTTTTAACCCTGTACATACGGCAGCTCTTCTGACGCAGAGACTATTTTATCAACGTCAGCGCCATCCCCGTAGGATGACCCCATGGGTGTTTCCAGACTCAGGCTCCGACGGACCAAATAAAGATGTTTTGTTTTGTAA EMBV3_30815 GGTGCTACTGGTGTGTAAGCTGTACTGTTGGGCGAGAAGAGACCTGTCTGTATGCTGGAA Gene GeneID:506331|MED26:NM_001098888:23_cdna Constitutive 0 NULL GeneID:506331 7 GENE MED26 MGC157192 mediator complex subunit 26 EMBV3_24428 AGGGGAATTGGAACTGAAAGATGAGTCCAGTGACACAGATGAGGAAATGACTGCGGTGGC Gene GeneID:506277|LOC506277:NM_001035034:43_cdna Constitutive 0 NULL GeneID:506277 6 GENE LOC506277 MGC128042 hypothetical protein LOC506277 EMBV3_19159 CTAGGCTTCTAAATGTAGCCTTTCATTGCATATTTCAGTGACCAGAACAGATGACCTCCC Gene GeneID:614007|SH3BGRL:NM_001035440:132_cdna UTR3_Alt 2 NULL GeneID:614007 X GENE SH3BGRL MGC128272 SH3 domain binding glutamic acid-rich protein like EMBV3_13228 AGGAAGCCCTGTGCTGTTCTGTGTGGTTGAGACATCGTGGACTGAAGAGATGGTTCTGCA Gene GeneID:615250|LOC615250:XM_002695741:428_cdna Constitutive 0 NULL GeneID:615250 19 GENE LOC615250 NULL UPF0631 protein HSD24 homolog EMBV3_12696 GACATAAGACAGCACATCTCTGCAACCCACCAGAAAGTAAGAATCCTGTGACTGGGTACC Gene BVT0102_017045 - 0 NULL GK000003.2:25809980-25821098 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172641 TCONS_00172643 TCONS_00172642 TCONS_00172640 1 XLOC_104181 Coding TCONS_00172641 XLOC_104181 Coding Coding MAN1A2 3:25817732-25970157 j TSS128537 6047 1 TCONS_00172641_2 641 0.00529188027120886 14 0.960419618957644 0.00104662851547583 0.00104528254219325 2.52056083645975e-05 1.86216815333411e-07 0.000890608229380737 5.31996358668295e-05 0.000244987775028856 8.93430192835329e-05 0.000284057422969616 5.68649436206073e-05 1.13372399209405e-07 6.56373523162054e-05 2.31596020950413e-10 6.03614139874127e-11 3.02616514202442e-05 0.00487880463567664 0.00174106001699139 4.76199375938678e-05 0.00013985288623469 2.15433963662604e-06 7.36379623387861e-05 2.44027424125847e-07 0.00137718959408205 0.00258471360633157 0.000131045947156887 1.00998815297265e-08 0.000347753403251918 9.35560292769024e-07 0.000263962737880866 4.19064697255909e-07 XM_005204038.1 MAN1A2 PREDICTED: Bos taurus mannosidase, alpha, class 1A, member 2 (MAN1A2), transcript variant X1, mRNA. 0.0 4210 100.00 0.385811146022821 NM_006699.3 MAN1A2 Homo sapiens mannosidase, alpha, class 1A, member 2 (MAN1A2), mRNA. 0.0 5337 82.70 0.85397717876633 TCONS_00172641_2 sp|O60476|MA1A2_HUMAN MA1A2_HUMAN Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB; 0.0 1252 95.63 0.998439937597504 1 coding 0 0 0 0 -0.0251309994841522 0.847037827580195 -0.0107504122327436 0.814758596451038 CCCCCAGCACACGCCGGGGCTTCTCAGAGGCCGCGGAGGAGGAAGTTCCGCTCTCTGACAGACCCGAGCGGTAGCAACAGCGGCCGCGGCTGGGAGGGCGCAGCGTAGCGCTGAGGCGGGAGACCCCTCCTCTCGGTTGGCCGACTTCCGAAGAGCCCCTTGTTTTTCAACCACTGAGATTAAGAAATTCTCCAATCGAAGCATCAGAGGAGCCCAAGTGAACCTTCTACAACTCTGGGATCACGTCAGTCACCCTTTTGGGGCGGGAGACCACGCTGGAGCATCTCCCTGAGGTGCAGGAATGGAAGAGCCCACCTTGCGTCCTTTCTGCGGTTTTGCTTGCCTCATCTACCCTTGGGAATGAAGAGGAGACTTGTAGTCACCCGGTGAGGTACCGAAAGCCAGATGGCAAAAGAAAATATCACAGGACTTAAACTAGTGATCGTTTTGGGGCCACACTCTTTTCTGCATGTAATTGAATGAGCGTGAAAGAGGTGCCCTATTGAAAAGCACAACAGTCCTTTAAGAGGAGAAAAATTGAATTTCCCCATTTTTGCCAAGATTCCGAAGACTGTTCAATGTATCGTACGTTTGATATAAGATGAGAACTTTATAAAATATTTTGCCCAAGAGCTTAAACGATGACTACCCCAGCGCTGCTGCCCCTCTCTGGACGAAGGATACCACCTCTGAACCTGGGGCCGCCTTCCTTCCCGCATCACAGGGCTACCTTGAGACTTTCTGAGAAGTTTATCCTCCTCCTTATTCTAAGTGCCTTCATCACCCTGTGTTTTGGAGCATTCTTCTTTCTTCCAGACTCTTCAAAACACAAACGCTTTGATCTGGGTTTGGAAGATGTGTTAATTCCTCATGTAGATGCCGGCAAAGGGGCGAAACACTCTGGAATCTTCCTGATCCATGGACCAGATGAACATAGACACAGGGAAGAAGAAGAACGTTTGAGAAATAAAATTCGAGCTGATCACGAGAAGGCTCTAGAAGAAGCAAAAGAAAAATTAAAAAAGTCAAGAGAGGAAATCCGAGCAGAAATACAGACAGAGAAAAATAAGGTAGTCCAAGAAATGAAGATAAGAGAGAAAAAGCCACTGCCAGCAGTTCCTATACCAAACCTTATAGGAACACATGGTGGAGACCCGGAAGATAATGACCTAAGAGAGAAAAGGGAAAAAATTAAAGAGATGATGAAACATGCCTGGGATAATTACAGGATATATGGATGGGGGCATAATGAACTCAGACCTATTGCAAGGAAAGGACACTCCACTAATATATTTGGAACTTCACAAATGGGTGCTACTATAGTAGATGCTTTGGATACCCTTTATATCATGGGACTTCACGATGAATTCCGAGATGGGCAAAAATGGATTGAAAACAACCTTGATTTCAGTGTGAATTCAGAAGTGTCTGTGTTTGAAGTCAACATTCGATTTATTGGAGGCTTACTTGCAGCGTATTACCTTTCAGGAGAGGAGATATTCAAGATTAAAGCAGTCCAGTTGGCTGAGAAACTCCTTCCTGCCTTTAACACACCTACGGGAATTCCTTGGGCAATGGTGAATCTGAAAAGTGGAGTAGGACGAAACTGGGGCTGGGCATCTGCAGGAAGCAGCATTCTTGCTGAATTTGGCACACTACATATGGAGTTTGTCCACCTCAGCTACTTGACAGGAAACCCAATTTACTACAAAAAGGTCATGCACATTCGGAAACTACTTCAGAAAATGGATCGTCCAAATGGTCTTTATCCAAATTATTTGAACCCAAGAACAGGTCGCTGGGGTCAATATCATACATCAGTTGGCGGGCTAGGAGACAGTTTTTATGAGTACTTACTAAAAGCATGGTTGATGTCAGATAAAACAGACCATGAAGCCAGAAAAATGTATGATGATGCTGTTGAGGCTATAGAAAAACATCTTATTAGGAAGTCTCGTGGAGGTCTTACCTTTATTGGAGAATGGAAGAATGGGCACTTGGAAAAGAAGATGGGGCATTTGGCCTGCTTTGCTGGGGGAATGTTTGTACTAGGAGCAGATGGTTCCAGAATGGATAAAGCTGGACATTATTTAGAGCTAGGAGCGGAAATTGCACGTACATGTCATGAGTCCTATGACAGAACTGCATTAAAGCTTGGTCCTGAATCATTCAAGTTTGATGGTGCAGTAGAAGCTGTGGCAGTCCGGCAGGCTGAAAAGTATTACATCCTCCGTCCAGAAGTCATTGAAACCTATTGGTACCTCTGGCGATTCACTCACGATCCAAGATACCGGGAGTGGGGCTGGGAAGCAGCACTGGCTATTGAAAAGTATTGCCGAGTCAGTGGCGGATTTTCTGGGGTGAAGGATGTGTACTCCTCTACTCCTACGCATGATGATGTACAGCAGAGCTTCTTTCTTGCTGAAACATTAAAGTATTTGTATCTGCTCTTCTCCGGTGATGACCTTTTACCTTTAGACCACTGGGTATTTAATACAGAGGCTCACCCTCTGCCCGTGTTGCATTTAGCCAACACCACACTTTCAAGAAATCCTGCTGTTCGATGAATGCAGCTCCAGAAAGACCATTCTCACCTGTGTTTTGTTTACATGGACCACTACAGAAACTAGTCTGGAGAGGGGCCTTTTGAAAACCTGGACCTCTTAAGTCAACATGGCAGGGTGAAACATGACTATTCCCTGCAAGACTTTTCAACTTGTAGATATTTCAACTTTGAAATGATTCCATTTTATACCTGACCAAAACATATTCTGGTGTATGTAGGACAGAGACCTGATGTGCTTTGATTCTTAATGAGATGGTCACTTGAAAAATTATGCCTGTTGCTGTTGTTTCTAGAGTCCTGGAATCTGGAGGCTATACTTCCTAAGAATAAGCCAAGAATGTGGAGCACCTTGTAGGAGTTGGAGATGGCCTTTGAAACCAATTACACATTTGTTTCCTCTGTGGAGCAGCTCTCAAGTCACAATATTTACACATTGTTTGTCCTCTTTTCCCCTCCATTTTTAATAATGGAATGGATTAAAATAAACAAGAGCAAAAGAACAATGTAACTGCATAGGCCACAGGAAGACTCAAAAAAGAAACAGAATACCTATCCCTCTCTGAATTTTCAAGTTCCCATTAGATGCAGACTGGCAGCCATTTCAAATCACAATCTAGTCTGTTAAAATTTCTTGGTTAAATTTGATTTCTCTGGGGACATGATTCACAAAGAATACTCTTCAAGTCTTTGTCTCCATATGGAATCATTGAAACTACTATTTATCATCACCACTACTTACGAGCCTGGGTTTGGAATTCCGTGTATGTTGTTCAGTCTCGTGTTGGTAGCATGACAAAAAGTGGGGAAAATGCTGCAGTTTGTTGCCTTGAAACCTGTTCTAAGAGAAAGCCTTGGTTTTGTTGGTAGGAGATTATTTTTTCAAACCAGCAAATCTACCAAGTAAATTTCGTTCACTTTGACCTTAGTAGACTCCCTCAATTTTCAGCTCTTTGTGTGGCTTGACAAAATTCACTGCACTGTTATGCAGCTCTGAATTTACCTTGATGAACCAGATTACTTTCACAATTTATTAAATCAAAAACAAAATGTATTGAAACTTCCTTAACTGTTTTAGGGATAGGGGATCCTTTATTATCCCATCAGATGAGTGAGCTTTTCATAAACATTTTATGTAAAAAATAAATTCAACTTTTTTTCTCCAAGGATATTTATATAAATCCAAAGAATTAGAGTAGTTTCAAAATAATATTTAGTAATTAAAATGTGGTATAATTTAATTATAATACACTAAATTTGAAATATATCTAAGGGGCTTTCTCTTACCATCAATAGATTTTGCAATATTTCTTTATATTTGTGGGGGAATAACTTAAATTTTATCAGGAACTAAAAGGTAAATAAGGCTTATAAATTTTCTGCCCCTTAAATTTATGTCACAGTACAAGATGCTTTTTCTTCCTTACACTTAATACAAACAGCTTCCATTGGCAGTAATAGTTGGGAGTAGTAGTAGTAGTCTACTACTACTAAATATTAGTCTAATATTTACTATGAATTTGAAGATTTCAAAAAGCAATGTGTAGGAAGCCCACTTTAGAGTTCTGAAGGTTTATTGTCTTATTTTGATAGTTTTTAAAAAATTTTTTATTAGCATGTGTTAGGTTTACATTGGAAAAAGATTTAGTAAATTAATATGATTAAATATTTTAAGGGTGTTCATCTTATATCACAGATAGTCAAACAGTTCACATAGTTCAGAAGATGATCCATAAATGATAACCCCCTCAAGATTTTCACTATACATAGAAAGTAAGGATGTAGAGCCAGTTGCATTATTTAAATCTTTAGGAAACTTAAATTTTAGTACATATTTTGAAATTGTAATATCTTTTACTAGTTGAAAAACTAAAAATTTTAAATGAAAAGGGTAGATGACTAACTTTAGAAGAGAAAGGGAAAGTGTTTGGTTCTCAAAAAACATTAGCTTTGCTCCTAAAAATAGCACAAGCCCACTTATGAGTCACTTAAAAAAAATGAATAACTTGACTTGGCAAAAGACCCAGAACAGCTCTGTAGATGGCAGTGAACACTTCCTCACTTCATTTAGAAGAATGCAGAGTGAAGGAACCTTTTTGTTCCCCAGGAACTTCTCAAGGAGTGAGAAGACAAAACCCCCACACCAAGTGCTCTGTTTGTCTTTCTGGAGCTCAAGAGAAGACTGAGAGGTGTATGAGCATGGCTAGTTCTGGTACAAACAAAAACTCTTGAGAGGGACAAAGGAAGAGTCTTCATCATCTCCTTATCTTCCTTGTGATGGTGAGAAGACTAGAGCTTATGACATTGCTTCCTTTTTCTTTTTTTTCTTCTCTGAATACCAAAGGCAATTACATTTAAGTCAGCTACGAGTTGCCAGTTTCATGTTTTATTTTTGTTAAGGATTTAAAATTTTCTTTTCTCCAAGATCAATCCTTATCCTATATTATTCCCATATTCTGCTAGTTTCTGAGAGTATTCTTTACTTTTTTCTGTCCTTTACAGTCCTTTGCATTTTGTAGACCTTATGACTCAGGTTAAACATTCGTTATATTTTTAAGACCTTCTGCAAAGAGCCTAGAAATGCTCCTTTCCAGGTGCCTCCTCAAAAGCAGACACGTTACTTTGTTCCTTTGGCACAAATGTGCACAGTAGATAGATCATTTGGTATACAAGAGAAAAAAATAGATGTTAAACACCCCGCTACCTTATATATTTATTTTTTCTTTCTTTTAGAATTTTAGAATCACGATTTTGGTTCAAACCAGTATTAAGTTGTTAAAACCAAGAGAATGTGGTCCCAACCAAAAAGAAGTCTCAGTGCAGAAAAATAGGTACCCAGTCACAGGATTCTTACTTTCTGGTGGGTTGCAGAGATGTGCTGTCTTATGTCTGACACTAACTATTGTTGTCTTTGAGCAAATGTTTATGTGTAAAAGCAAAACCTGGGTATTGAAGGAATATATTCCTGTTGTGGAATATTGACCCTGATTCTCTGTGATGTTCTCTAGGACAACCCAGGGCTTTAGTTGGTAGATTTTAACCAAGCAGTTGGAAATTTTGATCATTAACATCTCCTCTCCCATTCTCCATTGCCAAAGTCTTTGTCAGAACTTCAAATTTGTTGGTAAAATTTGTTGTGCTTGCCCTTGGAGTTTCTCCTTAGGCGTGGATTCCTTATGAATGAGTGAGTGAGTGAGTGAGTGAGTGAACAAGCACAGCATACCTAATGTGTGCCAAGCACTGTGCTCGGCACTTTCAAGTGTTAGAACACTTTGTGATTCCAGTGGCATTTTCTGTATAAGAGTTGTTCATACCATTTTAAGTGTTTTTTCAGTATGATTCATGTTACAAAGTCCTTAATTTTATATTTCCTTTAAATTAAAGAAGAAATGGTTTATAATATATTTTAAACAATGTGTTACTATATACTACTAACAGCTATAATTGTAGTTAATAACTAAAGTCTCTTGAAAAATGTCAAAAG EMBV3_40707 CCTCTGGGTGTAGGTCATGGCCAGATGGGGATCGCGCACAGATATGGAGCTGATTAATTA Gene BVT0102_181562 + 0 NULL GK000010.2:4641088-4789065 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018884 1 XLOC_009565 NonCoding TCONS_00018884 XLOC_009565 NonCoding NonCoding - 10:4787127-4787857 - TSS12774 730 1 TCONS_00018884_1 78 1 0 0 0 0 0 0 0 0 0 0.000281019190194419 0 0 0 0 6.44382685807727e-06 0 0 0 0 0.000225933753041481 0 8.31706704542055e-06 1.01653033596273e-05 0 0 0 0 0 0 6.65014829511642e-06 0 0 noncoding 0 0 0 0 0.0801781424134494 0.454560831262236 0.0538732111651171 0.297551283253234 GTTTTTAATTTAAAAATGAGGGGAGGGACAGCTCTAATGTGAAGTAGTTCTGTTACTGACCCTTTTTCTTTTTCTTTCTACTCTTTCCATTTCCTTTCTTCTCTTTTCTTTTCTATCCTTTGTTTCTTAACCTTTCCTTGCAAGTCTGGAATCCATCAAAATGCTTCAAGAAATTGTCCAGGGAATGGTAAGGCCAGTAATTAATCAGCTCCATATCTGTGCGCGATCCCCATCTGGCCATGACCTACACCCAGAGGGCCTTCCTGGCTCAGTAGCTCGCAATTCTGACAGCCTGATAGCGGCAGGTCCTGCCCAGGGTAAGGAACGGAGCTTCTCCTCCCTCTCCGCATCCCAGAATCTTCTGAGAGTGGTGCGTGTGATCCTAATTATTTTTTAAATATGATTATTCCGTCTCTGAAGAAAGCAAACCCCACCTGTAATCACAGCACAACCATTGCACAAGCTTGGTGTTAAGTCCCCCGTCTTGTTCCAGAGGTCTTTTTGTTAATGTGATTAATTTCAGTTCGAGGAACTGTGAAGATCACACGGCCCAGGAGAATCACTTCGGGTTACCCCATCTCTGACCTCTGGTGAAAGGGCTTCCTCATTGGAATGGAGATACGGTTCCAAGCAGAAAAGCGAAGACTTTTTTATGGCTGCGAAGAAAAAAAATTCTCTTCATTCTGAAAACACAAAAACACTGAAGGAGTCTAAAGATGGGGTATGTCCG TCONS_00012365 TCONS_00012366 . 5' 1209 TCONS_00012365 TCONS_00012366 . 5' 1209 EMBV3_31973 CTGTCTCCAAACACAAAACTTCCTCTGTGGGCCTCTTCGCTACACCATAGAAGATGCAGC Gene GeneID:493711|NR1I3:NM_001079768:221_cdna Constitutive 0 NULL GeneID:493711 3 GENE NR1I3 NULL nuclear receptor subfamily 1, group I, member 3 EMBV3_19694 TTCGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGAC Gene BVT0102_239548 + 0 NULL GK000002.2:69013879-69859860 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00251930 TCONS_00153219 TCONS_00185807 TCONS_00175545 TCONS_00065249 TCONS_00223462 TCONS_00115687 TCONS_00124584 TCONS_00176254 TCONS_00056147 TCONS_00040699 TCONS_00238299 TCONS_00186108 TCONS_00006827 TCONS_00109859 TCONS_00129782 TCONS_00157415 TCONS_00224114 TCONS_00252354 TCONS_00023615 TCONS_00064461 TCONS_00008225 TCONS_00122314 TCONS_00176255 TCONS_00245928 25 XLOC_006139 XLOC_154871 XLOC_092984 XLOC_111860 XLOC_105326 XLOC_039971 XLOC_136762 XLOC_069856 XLOC_076128 XLOC_106033 XLOC_033950 XLOC_024515 XLOC_144966 XLOC_112161 XLOC_002389 XLOC_065763 XLOC_078495 XLOC_095870 XLOC_137410 XLOC_155295 XLOC_014282 XLOC_039185 XLOC_003783 XLOC_073869 XLOC_150855 Coding TCONS_00186108 XLOC_112161 NonCoding NonCoding - 4:15529509-15530774 - TSS138476 1265 0.999209486166008 1 0 2.81304821623114e-05 3.07116477032186e-05 3.5401351034581e-05 3.4607148207398e-05 5.08075195390628e-05 1.61721443951034e-05 3.79319026297372e-05 3.11077219518735e-05 4.20254184212994e-05 0.000304423327191258 9.62021543305041e-05 4.85753383409993e-05 1.9984482398895e-05 4.20670181018665e-05 9.09853314977546e-05 0.00190874501483646 0.000699368385366907 0.00188744169610911 2.05290780087344e-05 5.42686561791397e-05 1.05714331737517e-05 0.000492979840671381 0.00117010451951191 0.00110504978257969 6.07735272687636e-05 5.09982564292969e-05 1.97344915004779e-05 0.000160848576763595 0.000178186909713588 0.000615778855848573 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 5e-38 163 68.86 0.349407114624506 0 noncoding 1 1 1 1 -0.00467391936394584 0.982742153247782 0.00271503954616079 0.960118590841055 GTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGCGACCTTGTTTGTTTTTGTTTGTTCGTATTTTCTCTCTTTCTTTTCCTTCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGAACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCGACTCTACCCAACTCTGTGAATTTCTGTGTGTTCCAGATGGTGGAGAGCACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCGCATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACGCTGTGAACCTCTCTGAGTGACCCTCACAGTAGAGAGACTTTTCATCTTTAATGTAGATGTTTTTTCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAACAAGACTGATAACCAGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGACAGAGGAATACTCAGCAGATAAAGGAAC TCONS_00180919 TCONS_00180920 . 5' 12479 TCONS_00180919 TCONS_00180920 . 5' 12479 EMBV3_02352 AGTCAGCCAAGCAGCCAGACAATCTTACAGTGACACACAGCCTTGAGGGGAACGGGATTT Gene GeneID:616997|FAM136A:NM_001046588:41_cdna UTR3_Alt 1 NULL GeneID:616997 11 GENE FAM136A MGC127625 family with sequence similarity 136, member A EMBV3_08893 CACCGCACCCTCCCTAGGCCCACTGGGTGTCGTTCCTAAAAAGTGATTGATAAACTCATT Gene GeneID:508637|SUSD4:NM_001101904:32_cdna UTR3_Alt 2 NULL GeneID:508637 16 GENE SUSD4 MGC143199 sushi domain containing 4 EMBV3_23707 TCTTGAGGAAGAAGGCAGAGTTGCAGCCTTCCCAGGAGAAGGAGCAGCCTTCCCAGGAGA Gene GeneID:100299645|LOC100299645:XM_002696796:527_cdna Constitutive 0 NULL GeneID:100299645 21 GENE LOC100299645 NULL hypothetical protein LOC100299645 EMBV3_37491 GGCAGGAAGAAATCCCGCCCCAAACTTCCGCCTCCCTATCCTCTACTTTGTAATTTATTG Gene GeneID:505162|PPFIA3:XM_002695204:907_cdna Constitutive 0 NULL GeneID:505162 18 GENE PPFIA3 NULL protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 EMBV3_14746 AAATTAGAATCAGGAAAGCAGGCTGGAAATAGGGGGCTGGCTTGCGAGTGGCTCCAAGGT Gene BVV0101_030137 - 0 NULL GK000019.2:18203080-18249106 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095407 TCONS_00095408 1 XLOC_057710 NonCoding TCONS_00095408 XLOC_057710 NonCoding NonCoding - 19:18219422-18222467 - TSS71140 3045 5 TCONS_00095408_8 97 0.282101806239737 1 0 0.000670228961602552 0.000279660960762534 0.00128856926492954 0.000519744519845049 0.00314486471715547 0.000114651811723282 9.38432529513111e-05 0.000299134596507589 0.000660749730862438 3.72408520831191e-10 3.00639986841215e-06 0.000100988082936089 0.000218611920225476 0.000614827747400437 1.80430818218395e-05 0.000312254991178573 0 1.81421621739763e-09 0.000496900712310938 0.00101708234093475 0.000526668678407558 6.61017744210196e-10 3.01283267377277e-06 1.42440231429925e-09 0.00010931407557509 0.000536782608006065 0.00100442607720891 8.34422142691622e-10 0 0 XR_232761.1 LOC786451 PREDICTED: Bos taurus F-box only protein 16-like (LOC786451), 2e-90 338 82.12 0.0991789819376026 0 noncoding 1 1 1 1 0.0838763835275896 0.521656047573808 0.113365829116028 0.119780868467504 GCAAATAATTTCAAACCCACTCCCAGCCTCGTCCCCATTACCTCACAGTTCAGTCCTGGCGGCACAGCCACACTCACAGCATAGGAGCCCCAGCTGTGTAATTGACTAAATGCAGTTACATTAAGGAGAGAGAGTGACAGCTGGCAGTTGGGAGGATGGACTGATGGGCTTAAGCTGGGAAGGAAGATACAGGTGGCGGGCATCTAAAGACACAGAGCTTGGAGTGCTTGGAGAGGCCCAATTCCCCTCGACACCTCAACCTCAGGCAATCAGAGCCTCAAGGTTCTGGGAAGCGAGGACGAGCGTGGGTGTGCTCCAACCCCCAGCCTCCTCCAGAGGAGCCCTGAGATAATGAATGAGCCATCAGCCTGCGCCTCTGCTCTCCCGTGAAAGGACCTCCCACCGCAGACCGTTCCTCTGCAGATACAATTGTGCCCCAGGAACCATCTGGCAAATGTGCCCGCTCCTTCAGCGGTTCTGGTATTTCCCTGGCTTGCAGCCCCTTCCTCTTGGATATAAATTGTTGCAGCAAACCACGCCAGTAGAATGCTTGCTGGCGCTTCACTGGCTTTCCCCGAGCCTGGTTAACCCCATGGCTCGCAGCCTATGAGTCTGTTCACAGCTAACGGATGTCTCGGACGCCTGTGTGTCTCCTCTCTGCTGTTCTTATGTATTTGAGAGTATGCAGAGCAGGCATACAAGCTGCAGACCGGAGCTGCCTCCGCCGCAGCCACCAGCTTGAGCGGCTGGGAGGACAAGCGCATTTCCGTTGCAGGACGTCCTTCACGGAGAAGGGACAGGTTAACTCCATCGCTCTGCAGAGGACTCGGTCCGCTCCCTGAGGAGCCACAACAGGCCACCACAGCTGTAGGACAGATCACGTGCCCCGGCCACATGCGGGAAGCTGCCCAGCAAACCCAGACAGACTGCCGCACCAGCCAGCCTCTGGGCCCCCATTTTACACAAAGCCATGTCCCTCCCCTGACCCAGCCTCATGGTGTGCAAGGCTGGAGAATTATGGGTCACCTTGGAGCCACTCGCAAGCCAGCCCCCTATTTCCAGCCTGCTTTCCTGATTCTAATTTAGAGAATAGAGAAAGGCAGGAGATGGAAAGGGAGCCCTGTGAGTCTCTCATCTCCTTGGTGATGATGCTTTATGGACAGGGGGCCAAGCGGAGTCGTCAGCCATAAGCCCCCCTTATACCCATTCAGGGAGTGCTGGATTGTTCCAAAGGGGTGGGAGAGGAAGCAGTCAGTGCACAAATTCCCAGAATGTCTCCATCACCCTAACAACGAGCGGGCAGTTTCTATGCAGATTCACACCTTCCTGCCTCAGTACATGCAGCTCCCTCTGTCTTGAACGCCTCAAGCTTCATCCACCTGGCCAGCTCCTACTCGGTGGTCTCTTGATTCTGCTCTGGCATCACTTACTTGGACTCCCTTTCTGCCCCCATGTGCTCTGCATACATCTCTACCCAGTACCCATCGCATTGTACCGTTTTTTGTTTGTTTGTTTTTTCCTAGCTTTTTAGCATGTCTCTTCCATCCGACTTAGACCTCGGTGAGGGTCTAATTCATCTCTGTGTCTGGAGCCTCAGCCTGTAAAAATGTTCATCAGCAGTGTTTTGGAGGGGAAAATCAGAGATTGCAGAATTGCAAGATGGATTTTCCTACTGAAATCCCCTAGTCCCACCCACATGGTTTGCAAAAGACAGAACTGAGGTTAGGAACCTATGCCTTCCCCACGGTCACCTGTCTACATAGTGGGCAGAGCTTGGACATGAACCCAGGCCTGCGGACTCCTGGGCCTGCTCGCAAGTGCTGAGGAATCCCATCCTGATGTGCATTTGTCCTCTCCAGACTGGGTAGAGGGCTGACTAGAAATGATCAGGCTTCTGAGCCGGCAGCAGGAGGATGAAGGATTAGAATGAGAACAATTGAATTTCAGAGCCAGAAGAGATGTCACAAGTCATCTAGTCTGACCTCTGCATTTACAGATGAGAAGACGGAGGCCCACGGGATTGAGCTGCTTTGCCCAAGGTCGCACAGCAAGCCGGTGGCAGAACTAGGGCAAGGATGCAGACCTCCTAATCCCCAGGAGACCTGGAGCGAACCTCCCACTCCAGAAAGATGATGGCCAAGCCCCCCTGCCCAGCTGCTATCTGAGGGGCGGATCCCCGGAGTCCTGGACTCTTCTGGGCTTTTCTTTCCCTCTCTCGGTGGCACGGCACTTAAGTAGGGTGCATGCTGCATAAATAATAAAGCACAACTCCCTTCCAGGGAGGAAGGCCGCGTCTGGGCAGGCAGTGTGACAGATGGTATTTACAATGTGTACTGAGAAGTTCTCACACAGCCTCACTTGGGCGGAGTGGCTGAGAGATGGAGGAAGCAGATTTGTGTGCCCACCGTCTCACTCCTGTGCCTGGCGTTCCTGCTGCTGCTGCTGCTGCTGCCGCGGCTGCCGTGTTTCTGTTCACTCTCCCTTGCGCTGGTTGCCCCTGGCTATCCTGGATCTGGAGCTCCAGGATGGTTGGCTGCTGCTGCTGCATCCTCATCATCAGAAAGGACCCCAAGGCTTCCTTCAACAGAGCAGATGCTGGACTCACTGACATTCTCGCGAAGGAGGCCGAGGAAGGCTTCTGAGGCCAAACCCTGGGCTGCGTTTCTAGGAATTCTGACATCTGGGAGCCCTTCCCCAGGCCCGGAAGAGAAATAGGAGAGATTTGTTCATTGAACAGGTTGTTGTTGTCGTTCAATTGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGGACTACAGCACACCAGGCTTCCCTGTCCTTCACTATCTCCCGCAGTTTGCTCAAGCTCATGTCCATTGAGTCAGTGATGCCATCCAACCACGCCCCCTTCTCCTCCTGCCCTCATCAGGGTCTTTTCCAATGAGTTGGCTCTTCGTATCGGGTGGCCAAAGGATTGGAGCTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGGTTGAGTTCCTTTAGGATTCACTGGTTTGATCTCCTTGCTGTCCAAG TCONS_00095400 TCONS_00095401 TCONS_00095402 TCONS_00095404 TCONS_00095405 TCONS_00095406 s 5' 16344 TCONS_00095400 TCONS_00095401 TCONS_00095402 TCONS_00095404 TCONS_00095405 TCONS_00095406 s 5' 19388 EMBV3_20951 TGGGCAGATCCCACGTGCCACAGGGCAGTTAAGCCCAAGCACCACAACAACTGAGCCTAT Gene BVV0102_054145 + 0 NULL GK000027.2:38016343-38028438 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18878 AGGGCTATAAAGACGCTAAAGGGAAGAGTGTACTCAAAGACTAAAGGGGAGAGTGTACTC Gene BVT0102_150978 - 0 NULL GK000013.2:12590758-12778210 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16152 GTTTGCAGCCAGATTCAGGAGTCGTGGAAAGCAGCTATAAGAAAGACCAGATGGTTGAGG Gene GeneID:508700|PIGK:NM_001077880:26_cdna Constitutive 0 NULL GeneID:508700 3 GENE PIGK NULL phosphatidylinositol glycan anchor biosynthesis, class K EMBV3_07770 TTTGAGAGCCAGTCCTTCTTGTACAAACAGGTCCCACCTCCATGCAGCCTCCTCGCAGGC Variant GeneID:617640|PUSL1:XM_002694135:503_cdna 773^935 3 EMBV3_12829 GeneID:617640 16 GENE PUSL1 NULL pseudouridylate synthase-like 1 EMBV3_34253 GGATTATCAGTTACTAATCAGGTGCCTCTTCCTTGTAGGGGCAGTGTACAAAGACCAAGG Gene BVT0101_022581 + 0 NULL GK000001.2:51390906-52149176 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169395 TCONS_00169402 TCONS_00169397 TCONS_00169401 TCONS_00169403 TCONS_00169396 TCONS_00169398 1 XLOC_103353 Coding TCONS_00169401 XLOC_103353 Coding Coding SLC16A1 3:30534266-30567360 j TSS126845 7514 1 TCONS_00169401_5 501 0.165956880489752 5 0.773094007796211 2.16203150658765e-12 3.68371932691846e-54 1.54967170062678e-12 1.52595649047332e-05 1.60059727493789e-17 4.141455140723e-15 7.21053941205556e-15 8.69670486268821e-13 1.04059299135374e-37 6.817383057363e-05 2.57091417913663e-05 5.6191257193217e-05 2.39945538714252e-16 6.23150008715048e-13 8.94541236705118e-05 0.00719209063138069 0.00194796696098358 0.00221039425206542 7.26700285256926e-14 6.44244689044511e-06 8.34777013935256e-14 0.00225877728547979 0.00252914329104882 0.00252051596291663 2.96611791817959e-21 1.2606641069255e-37 3.47988872832681e-26 0.000799286893350763 0.000323484117765385 0.000956187224595179 XM_005204092.1 SLC16A1 PREDICTED: Bos taurus solute carrier family 16, member 1 (monocarboxylic acid transporter 1) (SLC16A1), transcript variant 0.0 1.147e+04 100.00 0.846153846153846 NM_001166496.1 SLC16A1 Homo sapiens solute carrier family 16 (monocarboxylate transporter), member 1 (SLC16A1), transcript variant 2, mRNA. 0.0 3398 78.79 0.514240085174341 TCONS_00169401_5 sp|Q3MHW6|MOT1_BOVIN MOT1_BOVIN Monocarboxylate transporter 1; 0.0 1015 100.00 0.998003992015968 1 coding 1 1 1 1 -0.0334012711865571 0.872967721387531 0.0198643822288379 0.76575682053351 TAGTGGTGCCGGTGACCTTGGGAAAGTCGCTTCCCCTCTAGTCTTAAGTAGGCTCTTCAAGAGATGCTTGATCTGGGAAAGGGACGACGTGAGGTTGACTCACGTGGTGCCTTCAAGCTGCTGGCAGTGTTCTCCGAGGGTAGGGATTCAGGGCGGGAGTTATTTTGGACTCGTGGCACGCCCGCCCCAACCTCCTCGGCCAGCCAATCCTTGTCCCACCTGGTGACTTGCGGCAGTGGCTCGGGGGAACTGCAGTCCCCGTAGCCAAGACGTGACTGCAGGGTTTGAGTGGACTTTGCCGAGGGAACATTGCAACTGGCAGACTCCCGGAGTCGTGCTGACGGGAACTCTTTGTCATTCAACCTGTGGCTGCGGAACGTCCGCCGCAGCGCCCTCACTCTGGGACTTTAAGGCGGCCCTGAGGTGAGGAGTCTGAAGCATAGCATTACACTCGATACTTGGATTTGAACTGCATTTTGGAATTTATCAACATTTACAATGCCACCAGCAGTTGGAGGTCCAGTTGGATACACCCCCCCAGATGGAGGCTGGGGGTGGGCAGTGGTAATTGGAGCTTTCATTTCCATCGGCTTCTCTTATGCGTTCCCCAAATCTATTACTGTGTTCTTCAAAGAAATTGAAGGTATATTTAATGCCACCACCAGTGAAGTGTCATGGATATCTTCCATCATGTTGGCTGTCATGTATGGTGGAGGTCCTATCAGCAGTGTCCTAGTGAATAAATATGGCAGTCGTCCAGTCATGATTGTTGGTGGCATCTTGTCAGGCAGTGGCTTGATTGCTGCTTCCTTCTGTAACACTGTGCAGGAACTTTACTTTTCTGTTGGAGTCATTGGAGGTCTTGGGCTTGCCTTCAACTTAAATCCGGCTTTGACCATGATTGGCAAGTATTTCTATAAGAGACGACCGCTGGCAAATGGACTAGCCATGGCAGGCAGCCCTGTGTTCCTCTCTACCCTGGCCCCCCTCAACCAGGCTTTCTTTATGATCTACGGCTGGAGAGGAAGCTTCCTAATTCTCGGGGGCTTACTATTAAACTGCTGTGTGGCTGGAGCTCTGATGAGACCAATAGGGCCCAAACCAACCACTGCAGAGAAAGAGAAGTCTAAAGGATCCCTTCAGGAAGCTGGAAAATATGAGACGAAAAAGGGGGCAAGTGATGCAAATACAGATCTCATTGGAGGAAACCCCAAAGAAGAGAAAAAATCAATCTTCCAAACACTTAATACATTCCTGGACTTAAGTCTGTTCAAGCACAGAGGCTTTTTGCTTTACCTGTCTGGAAATGTGCTCATGTTTTTTGGACTATTTACACCATTGGTCTTTCTTAGCAATTATGGCAAGAGTAAGCATTACTCTAGTGAGAAGGCTGCCTTCCTTCTTTCCATTCTGGCTTTTGTTGACATGGTAGCCAGACCTTCTATGGGACTTGTAGCCAACACAAAGTGGGTAAGACCTCGAGTTCAGTATTTTTTTGCCGCGTCTATTATTGCAAATGGACTGTGTCATCTGGCAGCACCTTTATCCTCTACCTATATAGAGCTCTGTATCTACGCGGGATTCTTTGGATTTGCTTTTGGGTGGCTCAGCTCAGTACTGTTTGAAACGCTGATGGACCTTGTGGGACCCCAGAGATTCTCCAGTGCTGTGGGATTGGTGACCATTGTGGAGTGCTGTCCTGTCCTCCTGGGACCACCAGTTTTAGGTCGTCTCAATGACATATATGGAGACTACAAATACACATACTGGGCATGTGGCATAATCCTTATTGTCGCAGGCATCTATCTTTTCATTGGCATGGGCATCAATTACCGACTTCTTGAAAAAGAACAGAAAGCTGAGAAGCAGCAGAAAAAGGAAAGTAAAGATGAGGAGACCAATGTAGATGTTGCTGAGAAGCCAAAAGAAGTCATCGATGCAGCAGAATCTCCAGAACATAAAGCCACAGAAGAAGACCCCAAAGAGGCGGAGAGTCCAGTTTGAACCTGTGGGACTGAAGGGTAAATGGTGCAGCTCATGACCCAAAATATTCTATTGGCCTGTGATCTACCAGTGGTGCTCAGTGCAAATACTGGACATTTCTGTGGGAATCATACCAGGGGTTTATTGATGGAATTTTTGTTTCACTCCTTACCAGTAGCCTGGATTAAAAATGCCTAGCCTTGGGAAGGGAGTGGTTGAAAATGAATGAGAAAAGGAAGTCAGTTTGTGTGTTTGTTTGTTTGTTTAAATCTTTGCTTTTAACAGTGTCATGAAGATTATAATACGTGCCTTAAGTTTTAGTCTTTAGGGAGCCTTAACTATTAAAACTATTCTGCTTAACTCATCCATTTTCAGTGTTCCGTTACAAATAAAAATAACTGCTTTGAGGCAAATCTAAAATTTTAAATTAATTTTGTTTCATATTATCACTAGAAGATTTGAAAGTTGGTGGTTTTATAAAACCCTGACTAAAATATTTTCCTAGCATCAGTAGTTGCTTGGCATATGTGCCTGCTAGATATGTATTTAGGAAATTTAAGGCATGAAACTTTGAAAACATCTTGGCTTTTCTGGATGCATTGTACTTACTCATCATCAACCCTCCAGTGTCTTTTCTTGGGTTGCTTATTAGAAGTCAAGTGCTTGAGAGTTGATTTCATTAAATTACTATTTTTCTTCCCCTTTCCAAAGATACATTTTGCGTAGTCATAGATAATTGCCCTTTTTGAGATTACATTCTATTTTTTTCAATGTAAAAATTAGTATTAAAATACACAACTATGTATTCGTGCCTCCTCACTAAATTAAATGTAGAAAGCTATTTCATACAGCAGCTGAATTCAGCTTAAACTTTTCCAAAACTTCAGTTAAACTGTGAGACTTGGAATCTTTTTTTGTTGCTGTTTTCCTGGAATTTTACGCCTTTGATTCCCAGTGGTTTCATTTATATCCATATCTAGCTTAGCACTGAGTGTGAGATACTCAGTCTGTGTAGTGTTTGCTAATTAAAGAGAACCATAGAAATTTGGCCCACAGAAACCAATAGGGATAAGATTGGGAGAGAAGTTGCTATTTTGGCTTATCAATAAATAACTCCTTTTCTTTTTCTGATAAGGCCTTAAAGGAAATTATGTTTTGCTTAGAATTATTGGGCATATTCTTATTCTTCACACAACCCTAAAGATTTTGTGACCCTTTTTCACTTTATCTGAAATGTAAAGAAATGGGTTTAGTATACAGATAGGGAGGGGGACAGACCAGAATGAAAACTGTAAATTTTTTTTAACCTAGTATCTTTTAAATTACAGCAGGAAGATAATGTTAGACATTCAATGAATTATATTCAATGCATTTTAAAATATTGCTGTTGACAGTGTGAAAGTATAGACATAAAACCTTATTTAACAGGCTGGCTTTTTAAAATAAAAATTTTCTTTCTTTTTTTTTTTAAGAAATGTTTCTTCTTCCAAATGTTTATTTTCTTGAGGAAAATATTGTCTGTCTTCATTTTCTTTATCAAGATTCAATCTGGCCCTTGCTAATGTTAAAAATTCAGCACATGTGCATTGGAATTTGTGTATATGGCTTATTTTGATTTTTCTCCTTAACCTCTTCTTCCAGGCAAGCAGGAGAGAAATTTTTTAAAACTACTTCTCTGAAAGCGTTTTGAAAGCAGAGCAGTTAATTTTAAGGACACAATGAAAACTCCCTTTCTGTGCTCAGGTATCATGGCAGATGGAGGAGGAATTTTAGGGGAGAAGCCTGCTGTGATTGTTGACAGGCTTGGCTCCAGTTTGGACTCCGCCATTTTCCACCGACCTAACCTCTGTATGCCTCTTTCCCTTTCTAAAAAGTGAGGATCACCCTAAGTAAAAAATGTGGGGTGGGGGAGTAAACCAGGAGTATAAGATTATTTTCCCCCATCCCAGTTGTTAAGCTGCATCTATACATAAGACCCTGCTTAGTATTTTTCCACTACCTGAAACTTGTTAGTGAAGTGATGAAATTTTGGTGCAGAATGATCACCATTTATTAGGAGGAAGGGTTCTCAAGTTGCTGTATTCAGAAGCAAAAGGTTAAAAACTGGCTCAAAGCTGGACTAAACAAAACCTTTTACCACCCAATCCAACTCTGACTTTTTCCCCGCTGAAGACACAGGCTTAAGGGATTTATTCAGGATCAGTTTTGGTAACAGAGCCAACACTAAAGCCCAATATAGGCCTGCTCTGCCATCTAGTCCTTGCTAACAATCAGCTAATCCTCTCGTGCTGCAGTGCTGTTTTCAACACCGGACGCATCTGAGCTTTCTGACTGGGCAGTCTTGTCCCTTGCTCCATGTAAGGACTGACTAGACTTCTTAAGTTTTATTTCACTTGACAGAGTTTCAGTGGCTGCTTTGGGAAAATAGAGTGCCTGCCTATCCTTGCTTCCCTCTGTCCCACATTCTGTTAAGTCACAAAACATATAGCTGTCTAGATTGTTGTGCCCAAAGAGGCGTGGGACTGGTCAAGAGTATGCTCTGAAATAGTCTCAATTCAAAGCTGAAAAATTGTTTAAGAAACTGGTAGACTGGACAGTTGCAGATGATCATGGCAACAAGACCATATTATCACATTATATAGTCATTTTTTGAGAACGGAAATCATCTTAACCTATTCAAAATAATTTCTACAAAAGTATTCAGAAAAGGATGATGCTAAAACAAACTATAGAAAATTCAGGGAGGTATTTTTATCCCTGATTTAATCATACTAATGAATAATCTTATTCTTGTTTTATTATATTGAATTTCAGATTGATAAATTCAGAATTGGTTTATATGAAAAACCTCAATGTCCAAGTTTTACATCTTCCCTAGGAAATGGTTCATAGTATAATACATTTAATTATCAGGCGTGCATCACCCGCCCTCTTGTCGTTGGAAAGATGAGGAAAGGTGAACAGTGTATGTCCACCTTTGCAACACAGCTTGTTTTAATAATCAGATCAGGTACTTGAAGAAAGAGATTAATGACAGACTTCGGCTGCTATGAAAACTTGTAAGGAAGTGATGGCCCAAGCTTGCCTGGCTTGCCCAAATGTGAGCAATTAAGCCAAGTTGCTTCAGATTAGAAGCATCTAAGGCGGTTTCACGGAGAAGGCAATGGCACCCCATTCCAGTACTCTTGCCTGGAAGATCCCATGGACAGAGGGGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAGGAGTCGGACACGACTGAGCTTTTGACTTCACTTTCACGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTTGATGGGGTTGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAGCAAGGCGGTTTCAAATACATCATTCCTGAAATGTGTTTTAGCTTTAGGATTTCAGATTCAGTCATCCTTTCCCCACTTAGTCTGGGCCGTTGTGACAGTCATTCAGTAGAATATCTCTTCTTGGCTATACAGCACTGATTTACTTTTTGCTGGCTTTTTACCATGACTTGCTAGAAGACACTGGAATAGCTAGTAAAGAAATCACAGCCTATTGGTTGTTTAACAGTATAGACTGCCAGGGTTCAAACAAAGGCTTTGTGACCTCAAACCTAAGCATCAGGTGTTTTCTTCTGTAAAGGTGTTAATAATTAATGCCATTTGTTGCCCCAGGGCTGTCATGAAGTTTAGTTGATACGTGACAGCTTGTACTAGGCAAGGGCTTAATAAGTGTAAGCACCTATTTAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATCAAAGATATGTAGTACTTGGGGAAAAATTGAGCTCTTCTAATTCCCAAGGTGGGTGGAGCCTCACAGAGGGTAGTTTGGGAGTGACTCTTAAAGGTAAGACTCTTAGCTAAATGATCAAACTCCTTTCAGACCTATCCTCCTTTTACTCTTAGAAATGTAATGGTTCCTGTTTGGTAATGAATGAAAACTAACACCGCCTGAGAGGGGTGCTCTTTAAGTAGGTAGGTTTGAATCCCAAAGCCCTTGGTCTTTGTACACTGCCCCTACAAGGAAGAGGCACCTGATTAGTAACTGATAATCCTTTTCCTTCAATATTTGTGTTGATTCTAAAAAGAGCAGAAATATAATAAGCAGCCACTCATGATTGAAGTCCTCTCTACCTAGTTCTTAAATGTAAATGTTCTTAATGTAAACTGAAAGACTGATGAGCTTTGAATTTTTCCCTACTACATTGATAACATTTAAATCATAAATTGTCATCAGTTGGTGGCTGAATAAATTGGTACAACATATTGGCAAAGTTTTGCTGCTTTTATTGACTACGCAAAAGCCTTTGACTGTGTGGATCACAACAAACTGGAAAATTCTTAAAGAGATGAGAATAGCAGACCACCTGACCTGCCTCCTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGTTAGAACAGGATATGGAAAAATTGACTGGTTTCAAATTGAGAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGGGTATGTCATGCGAAATGCCGAGCTGGAAGAAGCACAAGCTGGAACCAAGATTGCCGGAAGAAATATCAATAACCTCAGATATGCAGATGACACCACCGTTATGGCAGAAAGCAAAGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGCTGGCTTAAAACTCAACATTCAGAAAACTAAGATCATGGCATCCGGTCCCATCACTTCATGGCAAATAGCTGGGGAAACAATGGAAACAGTGACAGACTTTATTTCCTTGAGCTCTAAAATCACTGCAGGTAGTGACTGCAGCCATGAAATTAAAAGACGATTGCTCTTTGGAAGGAAAACCATGACAAACCTAGACAGCATGTTAAAGAAAGCTGAGCGCTGAAGAAATGATGCTTTTGAACTGTGGTGTGGGAGAAGAGTCTTGATAGTTCCCTGGACTGCAAGACCAAACCAGTCCCTCCTAAAGGAAATCAGTCCTGATTTCCTGGAAAGACTGATGCTGAAGCTGAAACTCCAGTACTTTGGCCACCTGATGCGAAGAACTGACTTATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTGGGAAGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCATCACCAACTCGATGGACATGAGTTTGAGCAAACTCCAGGAGTTGGTGATGGACAAGGAAACCCGGTGTGCTGCGGTCCATAGGGCTGCAGAGTCGGACACGACTGAGCGACTTAACTGAACTACTAGTTCCCAAGCATTGTTCTAAGTTTTGAGAATCCAGCCATGAACATAATAATGTCTTCACATGCATGCATCCTACCTACTTTGTAGTAAGGGAAAGCAGACAGTGAAGAGTAAGTTATAAGGAAAACAGGAATATGGATATAAGATAAAACT EMBV3_02579 GCTGGTCAGTGGGACATTTGTCAACCATGGATATTGGGTGCTTGACTGTCTAATATTGCC Gene GeneID:538829|PPP1CB:NM_001034653:186_cdna Constitutive 0 NULL GeneID:538829 11 GENE PPP1CB MGC129042 protein phosphatase 1, catalytic subunit, beta isoform EMBV3_12344 TGCCGACGAGCCTACTTCAAGAGAAATAAGGTATGTGACTGGTGTAAGCACATAAGACAC Variant GeneID:537433|SOBP:NM_001101170:56_cdna 574^669 1 EMBV3_25879 GeneID:537433 9 GENE SOBP JXC1 sine oculis binding protein homolog (Drosophila) EMBV3_11344 CCCCCAGAGAGACTTGTTGACCACAAATATCATACACTGCCTTCCTGCTGGCTGCCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00303 AACTCTGCGATTGGAACCATATTAACCTTTCCGGTTCCTCAGAAGTTCACCTTTGGGCCC Gene BVV0102_198919 + 1 EMBV3_08086 GK000023.2:7434187-7470094 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17576 GACAGCGGCGAGCAGAACTACGGAGAGCGGGCAAATCCTGATCCCAACTGTTGTCTTGGA Variant GeneID:615156|TRA2B:NM_001034776:129_cdna 170^466 2 EMBV3_26374 GeneID:615156 1 GENE TRA2B MGC128162 SFRS10 transformer 2 beta homolog (Drosophila) EMBV3_40026 TTAGAATTTTTCCACAGACAGAAGGAGGCAGAGGACATGGGGACAAGGACTGTAGGGTCC Gene BVV0102_165220 - 1 EMBV3_41177 GK000024.2:41977867-41986505 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139033 1 XLOC_084792 NonCoding TCONS_00139033 XLOC_084792 NonCoding NonCoding - 24:41978999-41980227 - TSS104069 636 1 TCONS_00139033_1 57 0.223270440251572 2 0.483292583537082 0 0 1.45503094107009e-05 0 0 0 0 0 0 0 3.59934626897209e-06 0 0 0 0 0.00199332868880935 0 0.000591767205051073 0 0 0 0 1.44246011678439e-05 0 0 0 0 0 0 0.00180556480380841 XR_238040.1 LOC101907673 PREDICTED: Bos taurus uncharacterized LOC101907673 (LOC101907673), 3e-17 93.3 90.91 0.102201257861635 NM_016116.2 ASB4 Homo sapiens ankyrin repeat and SOCS box containing 4 (ASB4), 2e-06 57.2 78.26 0.0990566037735849 0 noncoding 0 0 0 0 -0.0364584618901272 0.749083125936705 0.0153157808836274 0.791809604871807 AGAGAGCAGAAAACCTTGAACGTACAGTCTAATCGGAGATACTTCAGATGGAAGCCCTGTTAAAGCCATCTGGTTCCCTGAACTAGTGACACTGCAGGCTGGATATGGTGGAAGGAGCAGTTTGTCCTCCAGAAAGCATCAAGAAGCTCTGGCTCTTAGAATTTTTCCACAGACAGAAGGAGGCAGAGGACATGGGGACAAGGACTGTAGGGTCCTGCTCCATTTCAGACAAAGAAGTAGACAAAAGTCCAAAAACGTCAGTAATTCCAAGAGTGTGAACAAGCAGATGCTGGCAAGCAGGTAAAAGTAGGAAACCAACTGCCTTCCTGTGGGTTTTTTGGCGTGGGTTGGTTTTATTGTTTTAATTATTTTGTTGTGTTTAGCCCTCCCCAGCTCAAGTCTCGAAAGAACTCTTGTCTCAGAATTGCTCTGTCTCCCCGTGGCATAAAACATCATCACAGCTGTGATACCGTCTTATGTCCCCTCTTACCTGCCTGGAACCATTCGCCTCTCAGTTCATACCCATGAGTTTCAGAGTGGAAGCAAGGTTTCCAGACAATGAAGACTGCTCATACTAAGTGAAGTAAGTCAGAAAGGGAAAGACAAATACCATATCATTTATATGTGGAATCTAAC TCONS_00139023 TCONS_00139024 TCONS_00139026 TCONS_00139027 TCONS_00139028 TCONS_00139030 TCONS_00139031 TCONS_00139032 s 3' 1134 TCONS_00139023 TCONS_00139024 TCONS_00139026 TCONS_00139027 TCONS_00139028 TCONS_00139030 TCONS_00139031 TCONS_00139032 s 3' 1134 EMBV3_12453 TGATTGGCCGGCTCACCAGTCTTCGAATGCAGCACCTGTTTATGATCCTGGCCTCACCAA Gene GeneID:509255|CDK5RAP3:NM_001075399:76_cdna Constitutive 1 NULL GeneID:509255 19 GENE CDK5RAP3 MGC139862 CDK5 regulatory subunit associated protein 3 EMBV3_03545 CAGAGCCGTCTGCTGCCTCACTGTTTTTTCTGGAATTTGTTTCCGTTCACCTCTCCTTTC Gene GeneID:507060|WBP2:XM_002696174:148_cdna Constitutive 1 NULL GeneID:507060 19 GENE WBP2 NULL WW domain binding protein 2 EMBV3_03045 TCCAGTTTTACTGGCCCCCCTTTTCCACCTCTTCTATTTTCCCCACCTCGTCCCTCCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26516 AGGAAGGCATGTGGGCCCTGTAATAAGTATCACGCGATGGAGTGTAACCTTGGGAGCTGT Gene BVT0102_007795 + 0 NULL GK000019.2:32869784-33357139 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08728 TAAGACCTCGTCTCTACTCCAGACTCCGACGACCCCTGCTGCCTTCTCACTATTTGCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20646 CTGCTAAACATTTCACCTAAATGTAGGAAAACTGCCTGGAGATGCAAAGCACATTACATG Gene BVT0102_130946 - 0 NULL GK000004.2:66346547-66362576 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184330 TCONS_00184326 TCONS_00184329 TCONS_00184324 TCONS_00184331 TCONS_00184321 TCONS_00184322 TCONS_00184328 TCONS_00184327 TCONS_00184323 TCONS_00184325 1 XLOC_111323 Coding TCONS_00184331 XLOC_111323 Coding Coding ZNRF2 4:66359716-66643765 j TSS137294 6141 2 TCONS_00184331_2 131 7 0.978405058300006 0.000725001372827661 1.88351700445616e-16 0.000167931008476377 9.56785271841648e-06 0.000715241211803347 0.000342521882514078 0.000863242782195419 0.000662976595116246 0.00163999539193344 0.000235664137079869 2.6464705855065e-09 0.00013190240663648 9.62937420252231e-05 0.000710273211561845 0.00041815175878533 0.000232631769148639 0.000127902800617209 7.30957156636585e-05 0.000442757854050569 3.35243829948996e-10 0.000193354847460054 8.36882540906692e-05 0.00056196846482715 0.000766709469577508 0.001006937025056 0.000345873752127593 0.000214265086308166 1.0049866392283e-20 6.26088369468571e-05 6.86635613764267e-05 NM_001101246.1 MTURN Bos taurus maturin, neural progenitor differentiation regulator homolog (Xenopus) (MTURN), mRNA. 0.0 4452 99.96 0.402214623025566 NM_152793.2 MTURN Homo sapiens maturin, neural progenitor differentiation regulator homolog (Xenopus) (MTURN), mRNA. 0.0 2383 83.08 0.378277153558052 TCONS_00184331_2 sp|A7MBJ1|CG041_BOVIN CG041_BOVIN UPF0452 protein C7orf41 homolog; 3e-94 272 100.00 0.99236641221374 1 coding 0 0 0 0 0.00279953194549096 0.985608253250897 -0.0480013453544893 0.369835153095851 GGGACCGGAGGGAGCCCGAGCCGCCCGGCCCCGCCGCCTGCCCGAGAGCCACAGAGCCGCGTGCTGCCCGTCCGGGAGGAGGGCGCCGGAGGAGAGGAGGGCGGGCGGCGGAGGGAGCTGGAGGCGGGCGGCGCGCGAAGAGGCTGAGGGAGCGGCGGGCGCGGCGGGCCAGGATGGATTTCCAGCAGCTGGCTGACGTTGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGCTCATCGCCACCGAGGAGACCGAGCGCAGGATGGATTTCTACGCCGATCCCGGCGTCTCCTTCTACGTGTTGTGTCCGGACAACGGCTGCGGGGACAATTTTCACGTGTGGAGTGAGAGTGAAGACTGCCTGCCTTTCTTGCAGCTAGCACAGGATTACATCTCCTCCTGCGGCAAGAAGACGCTCCATGAAGTCTTGGAAAAAGTCTTCAAGTCTTTCAGACCTTTACTGGGGCTTCCGGATGCAGATGACGACGCTTTTGAGGAGTACAGTGCAGACGTGGAAGAGGAGGAGCCAGAAGCGGACCACCCCCAGATGGGGGTCAGTCAGCAGTAGACTTCCGAGGGCTCCCGCCTGAGAAGGAGAGTGAGCCCCGTGTACCTAGGGTGGGGTCGTGAGCTCCTGGGTTAGCATTTTGCATTAGCACTTCGAAACAGGACGTCTGACTCCCAGCATCCAAATTAATATGAAATACCTTTTTAATGACCACACAATATCTGGGATGAGCTTTGCTCAGAAGTGACCTGAATTTTACTCCCGTTTCAGTGGGTCTCTATGGAGTTGTCTCGGTAGCCTTTGCCAGTTTGAATTTAGAGTCCATTCTGTGGCTGACTGTTCTCTCTTGAGTTTATGTTGGAGAACTAACATTTGCTGACTCGAATGTCGAGAACTCTGAATGTATTAAGGATATGCGTTGAGTCATCACAGGTGACATTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTTTTAATGTACCTTTTAAGTGTGTGTAAGTGGAAGGTTTTGCTTATAAAGCATGAGTTTTAATATCTAGTCATTAAAACTGCCCAAGTGCAAATACACGGGCAGAAAAGGAGAATGACTTAATTTTGGATTAAGAGGGTAAGAGAAGCAAAGAAGCCTTTGTTGAAGTGTCCTGCCATTACTGAGTTACCTGGGTATAGAGCAACTGGTTCATGGTTAGGTAGAAACATTACCTGCATGTTCAATTATTTTAAAACATGCTGATTCCAAAGCTACTTTTAAAGTGGAGAATATAAATGGGATGACATAAATTATTGATTTCTTGAAAATGTTTATAAGCCACCCCCATATGAAACATTTACCTTCTCTCTTTATAACAAGATGGCAACTTATTAAATTATGAAAACATCCCAGCTCCAAGTGCCACTTAAACTTTGAAGCCATAGATGAATTTAAAAGGAAAATAAACCAGGATAAAAAAATTTTTTTTAAAATATGATGGAATCCTTCTTTACTTCCTTAATTCATCTCTTATTCTTTCAAAAAAAGTCAAGAAAAAGATCCCACTCTATAAGTTATTTAAAAATTGTAATCAAGTGCTTTGAGGAATTCAATTGCAGTGAAGTCATAAAGTGATATGAAGGTGGGACTTTTTAAATCATGGGTTAGCTTGGTTCAGTGGGGAAGTTTTAATGATCAAAATAGTCAGACAACTCACAGGAACAACTGTGATAATAACTGGGAACACTGCTGTCACCTTTTGGCCACAAACACCGAGTGGGGAAATTCTTTGCAATGCTAACATGGAATTATTTAAAACATTCATTTTTCTTAGACCCTTCTGCATCTCTGGTTTTAATAAAAGATGTGGACTGCCTCTTTTACAGCACTTGACAAGTCATAACATCTGGGGTGGAACTGTTGTTAACATGCACACATGTGCCTGTTGGGTTGTCAAAGTTTTAGATTAAGAAAGCAGCAGTAGAGGCCACAGAGCTCATGGGAGTCTTGTATATCTTCCAGGCATGTCGGTGTAAACTTGATTATCTCAACAATTTCTGTTTAATTGATTGGTGCTGTGAGGAGCACAGCTGCTTGTGGTTAAAATGGTGTCCTGCAGTTTTAAGTCATCGGGTAAAATAATTTCGCGGTTTCCATCCGTGCTTCAGTGCCCACGTTTTGTCTTGATTTTTTTTTTCTTGGAAAGACATATTAAAGGTTAACTTAAAGTGAAATGAATTTCCTTTAGAGTAGCCTGTTAACAAAACAAACCTTGAGGTTTCATCCAGTGGGGTGAGCAGACTCCATGCCTTGCTCTCATGCCCGTGTTCTGATTGGCTGTGTACCTGAGCACAGGTGATTGAAATTGCACCTCCCCATAGGTAGCACCCAGATTCATAAGCTCCATTTTCACACAGTAGGCCGAAAGGATGCCTTCTGCCACCAAAATGAAGACGCTTGACTAGCTTGCTCCATTCAGAGGATTTAAGTGCCCTGTATGCTCAAAATTTGTACCCTCAGATGAAATGGATTTACATCTTGTGATGTGTTTAACAAAGCCAAGAATAACCTATAATGAGGACGTTCTGAGTAAAGATGCTGGGGAATGTGCAATATGCCTTGAAGAACTGCAGCAGGGAGATACTATAGCACGACTGCCTTGTCTATGTATATATCATAAAGGCTGCATAGATGAATGGTTTGAAGTAAATAGATCTTGCCCTGAGCACCCTTCAGATTAAGCATCAGCTTCCTGTCTTATAGGTTTCCTTGACTTCAAGATGCTTGAAAAACCAAGAGGATACGAAGATCTATCTCTGGAAAAACAAAAACAAAAATGCAGACACACTCAGCCAGATATCTGAGTTCTGTGAGACTCAGTAATGCAGAGATGGACAATCATATAGGGAAAAAATCCTGCTGAAGAGAGGACAATTGCCACAGAACTCAGTGTACCAAACATGCATATAAAGGACACACAGGGATTTTGAAAATGCTGCACATCCCTTAGTAGTCATCTACATAGGTAATACTGATGAACATTTTGTATTCAGACGCCAAAGTTAACTGATTTAAAAGTTGATTTACTTTTTATTAAGTTCTCTAGGGCTGCACAACTACTTGTATTTGATTTGTTTTGGTTTTTAGTTTGGGGACCTTTACTTTCCCAACATGATGTTCCTGCATTCATCAGTTCTTAAATTGAAGACCACGTAATTTACTTCTTAAAAATTAAAGTCTTAAATGTGAAACCAAGAAATGTAATCAAGCAGTAAAACATTCTCTGAATGTAGACCATGATCTCAAGTTCTTTGATTTTTTTTTTTTCTCCCCAAGAATAGAAGTAGGCTTCTACATAGGAAAGCTACAGTATGTTACTATTTTAAATTAAAGGTTTAACATTATCAGAATGCAGTCCAAAGAATAAAAAATCAAGTTACATATTATATTCTAATTAATTAAATCTAGGATTATCTACTGAATTGCAATTTATTAAATATGTTATTTCCTTTTTAAATAAAACTGCTCAACAGGTAATCAGCAATGAATCATCTTGCAGCTATGCAACTTAAAAAAGATAATTACCAATTTTAAGTGCTGCCAGCTATAATAACTTTGTTTTAACGGGTATTTTTATTTGTTCTTTTCATGTAATGTGCTTTGCATCTCCAGGCAGTTTTCCTACATTTAGGTAAAATGTTTAGCAGGTTGTAATACTTTAATAACTTATGAAAAGGGTAAAATAAAATTTTCTTGAGTGGAACTTGGAATAATTTGAGGGACATTTTTATATACTTTTAAAAATCAGAATTTAATTGGGATGCCAGATTTATAGCAATTTGCATCTTTAATTTTCCAGATAATCTGGAGTTTAGCATTTGATAAATGATTTTTTAAAGCAGACATGAAGATTTTGTTAATTTATAATTTATTAATGTGTTATTACTATAATTAAAATGTTACAGAGAGTTTTAAATTCAGTCTTGTATAGAAAGAAATGTATTAAGCAAAATTCTGTGAATAAATATTCCCACAAAATACATCTGAATGGTTAAAAAGTACTGGAAGAAAGCTATCAGGGCTGCAACAATGAATGTCTTTTTCTTTTTTTTAGTATCAAAAATACCAATTCATAAATTTCATGTTTTCAACATAGGGAAAATGTTATCAGAGGACAATTTAAGCAGTGCACTTTACTTGGAATAATTAAGAGTTACACAGTACTGTTTCCTTATTTTAAGCTTTCTTTAATGTATTTAAGTATTTACTTTTCTTTTTTACTGCTGCTCTTATCCTTCTCGATTTTCTTCCCTTGTTCTGTTGCTTCTGTTGCATATTTTTTTTAAAGGACACGTACAGGAGCAACTGCTGCTACCCAGAAAAATTTGTGTATTATAAACAATTTCTTGGAAGAGTTTTTAATTGTTATTTGTGTGATTCTAGAGCAGATAACATTTTCCCTAAAGTTATGCTGTGAAATGCCTTTTGTTATGGTGCAGTTAAGGAATCCTAAACCTCCATTGTGACAAGCTGACAGCACAGTTTCATAGGTGCTTTTTTAACCAGTTGTGGAAATTATTCTTTCCTCAAGGAAAATATTCTCTTCTTAAATTTTTTGTGGTCATGAAATCTTAATATGAATGGATTTTAGTTCACATTTTCAGTTTTGTAAGCTCTCTCTCCCTCTCTTGCTCTCGCGTGCGTGCTTTCTCTGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACCCCCCCCCCCCCCACCCACCCACCAAGAACACACACACACACACACACACACACACACCAAGAAAAACCTCTTAGAATGTGAATAATTTTTTTTTCTACCGGTATGTATGTTGTTATGGTAAGAATTACTTTGTATTCCATTCTTAAAGGAAAAGATTTACTGTAGCTGTGGTAGTTAGCTATTGATATTTTCTTGGAAATTGATTTTCCGATATAATTTACTCATTGACTTTTAAAGTTTATTGGCCTGAATTCCCTTGTCCTTCTTTATCCAGTACCATACTCTCACAGTCTTATTCATGTAGCCTTTGTTTGTCATAAGGTTCTATGCTGCAGCTCCTACAATAGAAGCTCCTGTGGTTGGAAAGAAAGTTCATTGTTTGCCAGTGTCAAGTGCTACTTGATTATTTGTTTAGAACAGTATTTACTTATTAATATATTTGTTCATAATGATCCCTTTTTGTTAAAATTTACAAAAGGTAGCATTTTTTTTAACTTTAAATTCAGTCTCCATCAGTGACTTCTTAAAAAGAATTTAGAAATTGAAAAAATTTTAAAGCCCAAATGCTCCAGTTTTTATTTAAAGTCAAAATTGTTAATCTGGAAAATATTATAAGTAATATTGTGCATAATGTCACTTATAATATTTATAAATTTATATAAAGATACCGAGTAGTGTAAGTAGGACATAAAATCACATTAGATGTTTAAATGTGTAGCTGAAACTGCTGACAGCTGAATATTATGGAGACAAAATAAAGATTGAAACCCTAGTTATCAAGTTGGTTCTAGTTTTCTAGAAACTTTGTAAATACTTGTTTTTAAGTAAGATCACAGTTAGGTATATAGAAAGCAGTATACTCTGAAATTTCACTTTAGTGCCACTCTCTTCTTTATAATGGGTTTATTGCCAATTTTGACTCATGCTGATCTGATTTTTCCGCCCCCAGAATGTATAAAAGAGTGTAAGGATGTATATGAGTACAATTATTCTGTCTTCTTTTGGCTCTTTCCCAGAGAAATAAACTAAGAATAATTTTAATCTGTATTTCAGATCTGGTCCTAAATCAGATGTAGATTGTGTTTTAAGAGTAATGTTTGTGATAGAAATATAGATAATGGTTTCTCTAACTCATTTTTTGGTAGTAGCCAAACAACTAAAAAGTCATGTTGTTAACTGTTGGATACTATGTAGGTTTTGATTGTTTCTTAGTGCAAGTTTTCTATTTCTTTTGGATATTATACAATTAATTTCAGTTTTCACCTACTAAACCGTGTACTGGAATGTAGCCCCGAAATGCCTGAGGGAGCATATATGCAGTATGTATCTTGAGTTAATGAAAATACCAGATTTTTTTCAAA EMBV3_04106 TGTCCATGGGAATGCGGGGATCTCCAGGAGAGATGCGTTTGCTTATGTTCAAGAAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25184 GGAACTGGCTTCTCGCTGTACTGCTGCAGATGGACCTGTAGATGAATACATGCTGCCATT Gene GeneID:281598|ACVR2A:NM_174227:49_cdna UTR3_Alt 2 NULL GeneID:281598 2 GENE ACVR2A ACVR2 activin A receptor, type IIA EMBV3_15922 TTGGGTGGCTTGGGCAACTCTGTGGTCCAGTCAACATTCACTCTGCAGCTTCCTTTGTGT Gene GeneID:514760|LOC514760:XM_002697882:446_cdna Constitutive 0 NULL GeneID:514760 25 GENE LOC514760 NULL similar to olfactory receptor, family 2, subfamily C, member 1 EMBV3_19464 GCCGAGAATGGGTCCTGGAGAAGAAGGCACGCCGCAAGCGCAAGCCTCGCTTCTGAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42986 TTGTGTGGCCTTTAATCGTGCCCTTCTCCCTCCTGTATCCACTCAAAGCCTGGCACATAG Gene BVT0102_338494 + 1 EMBV3_29589 GK000017.2:72597380-72602053 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05049 AGGACAGCAGTGAAGAGAAGGAAGAGGAGACTGTGAGAAAGGAGAAGGGAGAGGACGACT Gene GeneID:618071|LOC618071:XM_002688942:157_cdna Constitutive 0 NULL GeneID:618071 7 GENE LOC618071 NULL hypothetical LOC618071 EMBV3_29593 CAACCTCTTAGGTGATGAGAATGGGAGGAAGGCTGGAAGGGCTGAGAAATGGGAAAGGCT Gene GeneID:515556|ABR:NM_001046204:124_cdna Constitutive 0 NULL GeneID:515556 19 GENE ABR MGC137726 active BCR-related gene EMBV3_04051 GCTCATCGAGTGCAGCTACGCCAGAGCCAAGAGGATGAAGCTCCACTGGCAGTTCTCTCA Gene GeneID:614203|GALNTL4:NM_001076316:216_cdna Constitutive 0 NULL GeneID:614203 15 GENE GALNTL4 MGC139629 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4 EMBV3_20683 AACCGCGACGGCGGGCTGTGTGTCAACGACTTGGCCGTGGGACTTCGGCGCCTGGGACTA Gene BVV0102_425207 + 0 NULL GK000011.2:98723381-98750458 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026114 TCONS_00026115 1 XLOC_014926 Coding TCONS_00026115 XLOC_014926 Coding Coding SLC25A25 11:98724594-98760807 j TSS18808 3263 1 TCONS_00026115_3 366 10 0.910167900143599 5.75146814346465e-11 0 0 0 3.91877817497686e-07 0 1.30463631414323e-07 0 9.8912512004377e-09 0.000541682893157133 0.000206208602285137 0.000405445546844298 0.000198859377376669 0.00088107614995517 0.000307450121505604 0.000181424169183523 9.07606263808807e-11 8.6151691140217e-07 0 0 0 1.10522825938737e-11 0.000210854043314181 5.858730278228e-07 0 0 0 8.67165445864129e-10 5.0521126840345e-11 0.000524379434719053 XM_005213289.1 SLC25A25 PREDICTED: Bos taurus solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 (SLC25A25), transcript 0.0 5880 100.00 0.998774134232302 NM_001006641.3 SLC25A25 Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 (SLC25A25), transcript variant 2, 0.0 2154 89.68 0.498620901011339 TCONS_00026115_3 sp|Q0V7M4|SCMC2_BOVIN SCMC2_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-2; 0.0 761 100.00 0.997267759562842 1 coding 0 1 1 1 0.0485721689846786 0.684145640857431 -0.0046533220249679 0.958293329203458 CGGCTGCGCCTCTGGAGCCTCTTCCAGACTCTTGACGTCAACCGCGACGGCGGGCTGTGTGTCAACGACTTGGCCGTGGGACTTCGGCGCCTGGGACTACACCGCACCGAGGGCGAGCTTCGGAAAATCGTACAAGCTGGCGACAAAGACCTGGATGGGCAGCTAGACTTCGAAGAGTTCGTCCACTATCTCCAAGATCACGAGAAGAAACTGAGGCTGGTGTTCAAGAGTTTGGACAAAAAGAATGATGGGCGGATCGACGCCCAGGAGATCATGCAGTCCCTGCGGGACCTGGGGGTCAAGATATCTGAGCAGCAGGCAGAAAAAATCCTCAAGAGCATGGACAAAAATGGCACGATGACCATCGACTGGAACGAGTGGCGAGACTATCACCTCCTGCACCCCGTGGAGAACATCCCTGAGATCATCCTCTACTGGAAGCACTCCACGATCTTTGATGTGGGTGAGAATCTGACAGTCCCCGATGAGTTCACGGTGGAGGAGAGGCAGACGGGGATGTGGTGGAGGCACCTGGTGGCCGGCGGTGGGGCGGGGGCCGTATCGAGAACCTGCACGGCCCCCCTGGACAGACTCAAGGTGCTCATGCAGGTCCACGCCTCCCGCAGCAACAACATGTGCATCGTGGGTGGGTTCACGCAGATGATTCGAGAAGGAGGGGCCCGATCACTCTGGCGGGGCAATGGCATCAACGTCCTCAAAATCGCCCCCGAGTCGGCCATCAAATTCATGGCCTACGAGCAGATCAAACGTCTCATTGGGAGTGACCAGGAGACTCTGAGGATTCACGAGAGGCTCGTGGCAGGGTCCTTGGCAGGGGCCATCGCCCAGAGTAGTATCTACCCGATGGAGGTCCTGAAGACCCGGATGGCCCTGCGCAAGACAGGCCAGTACTCGGGCATGTTGGACTGTGCCAGGAAGATCCTGGCCCGAGAGGGCATGGCCGCCTTCTACAAAGGCTACGTCCCCAACATGCTGGGCATCATCCCCTACGCTGGCATAGACTTGGCCGTCTACGAGACACTCAAGAATGCCTGGCTGCAGCGCTATGCAGTGAACAGTGCAGACCCTGGTGTGTTTGTGCTCCTGGCCTGTGGCACCATGTCCAGCACCTGTGGCCAGCTGGCCAGCTACCCACTGGCCCTGGTCAGGACCCGGATGCAGGCCCAAGCCTCCATGGAGGGTGCTCCCGAGGTGACCATGAGCAGCCTCTTCAAACAGATTCTGCGGACCGAGGGGGCCTTCGGCCTGTACCGGGGGCTGGCCCCCAACTTCATGAAGGTGATCCCGGCCGTGAGCATCAGCTACGTGGTGTACGAGAACCTGAAGATCACCCTGGGCGTGCAGTCGCGGTGACAGGCGGGGGGCCAGCCGCCCGTGCAGACTCCCTGATCCCGGGCTTCCAGCCCTGGGATGTGTAGCCATCTCATTCTGTGAATGTACCAACACTACGCTGACTGAAGCCAAGCTGTGAAAACCCTGGGGTGCGACCGCAAGTTGGGGGGACAGAGCTGGCAGGCCACCGGGTGCGTCCTGCTGACCCCGGCCGACCCGCGTGTCCATTCCAGGGAGGACCTGTGAGTGTTCCTCAGGGCCCAGGGCTCAGCAGGACATGGGCCCGAGCGCTTGGGGGCTGAACGCTGCCCAGGGGCGCCTGCGGAAGAGCAGGGCTGGGAGGCCGGCTTCATCCTCCCATCGCATCCTCGCAGCTGGACCATTGGCGTGGGCCGTCTTCTGGCCTGCTGCGCGTCTTCCCCGGGGGGCCCACCTCGCTTCCTTCCTCGCTGCTGTTTTCAATGGTAGGAGGAGGGCCCCCGGCCCTCTCCCCACACTGCTTCTCTCCCCTCAGTCAGTGGGGAAGGGTAGTTGTACCTGAAACCTGAGCCCAGATTCCCAACTGGCCGCTCTGCCGCTGGCTGGCTGGTGCAGGGAAGAGGGCTTCCAAGCTGCCCAGCAGGTGGGCACCTGGATGCACGTGTGCATGATGGGGGCCAGGCTGCCTGGCGCATGGCTTCACAGGTCCTGGACCCCAGAGAGCCTCTGCTCCCTGCCGCTGAGGGGGGCTCGTGAGGCTCTGAGCTGGGCCCGGACTCTGTCAGGACTGGCACCAGCTCAGAACCAAGTCCCTCTGCCCCGCTGGCATGAGGGCAGTGGGGATCGTGTTGAAGCAGGAAGGGCCATGTCTGCCCTGCGTCTGCATGCCCTGGCGAGAGAAGGAAAAGGTGTTCAAGGCCTTAATAATTACGTATCATTGGAAGAAGGGTTTTGTTCAGAAAGAGAAGCTGAACAAACGTGCAGGTTCTGGTCTTCCAGAAGGAAGACAGAGAGCCGACGGCTTGGCTGACCTCATTTAAGTCTGTTTCTGATGCCCCTGGGGACTCGCGTCCGATCCCCACGGGGCCAGGTGGGACCACTTCACATTCCGCTGATGCAATGTGTCACACTGCTTGGAGCCTATTTATTTTGTATTTATTTGAACAGAGTTACGTCCTAACTATTTTTATAGATTTGTTTGATTAATAGCCTGTCATTTTCAAGTTCATTTTTTATTCATATTTATGTTCCTGGTGGATTGTACCTTCCCGGCCCCCGTGAGGTGGGGTGGGGGGAGGGACCAGGGGGCCGTGGGCGTGACCCTCGTGCCTGTCCAAAGAAATTCCTCTCTGAACTGGTGACAGAAAAAAGGCAAAGAAGGCAGAAAGGCCCTGACCGCAGAGAGACGGGCCCTTGGCAGGTCGGGGGGTGAGGGGGCCAGCACCCAGGAAGCCTTAGGAGTTGAGGGTTTGATCAGGGGGCGGGAAGAGGGAGGGAAACTCCCACTCCATTGAAGATGGAAGTCCAAATCGTTTCTTGGACTGGGGAGGGATTTCTTTATTTTCCCCCCTTTTTGAAGGATAGGGCAGTGAGGTACCTATCACTGTGAGTTTGGGGGTGAGGGCCGGAGGAGAAGGCCACCAGCTCCCCCCGCCATCCCCTGTGAAGCGGGCTCCCTCTGTCCTGGCCACCACCCCGCAACCCGCTCCTCCTGCTCAATAATGCTGGTCTCTGTGCAAGTGCACGGCCATATTTCCATTCACCAGAATGGCCCGATAAGGACAATTCAAATAGGATGCAAAGATCAATGCAAAAATTACTGTTATATATAAATAGAGTTATAACTGGAATTGGTGACAAAGCAAATTAAGAAAGAATTGGGAGTTGTCATTTAAAACAGCCTTCTAATAAAGTTGTTTAAGAGCTGATGA EMBV3_38980 CATCTCAGAGAAAACAGGGACAGCATTCATTCCAGAGACAGTTCTGTGTGTGGCTACAAC Gene GeneID:505945|SRPK2:XM_002686763:60_cdna UTR3_Alt 3 NULL GeneID:505945 4 GENE SRPK2 NULL SFRS protein kinase 2 EMBV3_38533 CGGATCAGTCACAGCGCTCACCATAGTCTGCCTTCGAGGACCATCATCTTGTGAGCATTT Gene BVT0102_082230 - 1 EMBV3_20756 GK000011.2:103015672-103039726 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026385 TCONS_00026386 1 XLOC_014981 NonCoding TCONS_00026386 XLOC_014981 NonCoding NonCoding - 11:103016047-103019414 - TSS18909 3367 1 TCONS_00026386_7 146 0.320760320760321 1 0 0.000246494224604342 0.000176308391692507 0.000453493388373779 3.20624058602269e-05 0.000173027712990081 0.000203230389508525 0.00010738513364524 0.000135252115984253 0.000452759112944892 9.03441254165044e-11 4.92040388516507e-11 1.16817803071954e-05 0 5.44089466807315e-05 0.000177716965183729 5.32010666882574e-10 0 5.35043578633752e-10 0.000204456975794215 0.000191583977714244 3.33593522283557e-05 1.42196111296537e-10 0.000229512802606848 4.48117651819076e-05 0.000123794674681769 0.000261865011684566 9.28737897226172e-05 1.8984929021185e-10 1.11796059291313e-10 8.21394404921621e-05 XM_005211508.1 RNASE13 PREDICTED: Bos taurus ribonuclease, RNase A family, 13 (non-active) (RNASE13), transcript variant X4, mRNA. 2e-142 511 93.49 0.1000891000891 0 noncoding 0 1 1 1 0.0179591448350661 0.88480008814598 -0.000232803198677967 0.996452794747551 GGAGGCGGTCACGTGACCCGGGCCGGGCGGGAGGGGCTGTGCAAGAGGCGTAAACAAGTTGGCCGAGCTGGGTGTGGTTGGGGCGCCTCCTGCATTCCCGAGCCTCGCACACCCGGATACTCCCCAACCGAGGGTCTCCCTGTGCCTGACCGCAGAGCTTCCATCTTGTTTCCCAAGGAGCCAATGACCCCCGTGGGCGAAGGGCTTGCGGAGAATCCCACTGACTTCTGCCCCTCAGATTGCTAGCATTTCAGACACCCGGTCACGACATCTGTGGAAAACCACCATAATCAGAGCTGGCTGCTTTCAAAGCCCAACCCCTTCATTCAATCCTTGCCCTGCCCCCTCCCTGGCTGTGTAAACCTGGACAAGTTTTGAAGTCCTTTGAGCCTCAGTTTCTTCCGCTGTGAAATGGGCATAATAACACGAGTGGAGTGAGGATTCAGGGACATAAAGTACGGAGGGTGTTTAAGCACAGTGACCCACGCAGGGTAAATGCTCACAAGATGATGGTCCTCGAAGGCAGACTATGGTGAGCGCTGTGACTGATCCGGACCAGGGTGAGAGAGGCCGCAGTCTGAGGTATCTGAAAGGCTTTCTGAAGGAGTGCGCATCAAGCTAGGCCTTAAAGGAAAGGTAGGTTTTATGAAATAGAAATGGGAGAGGCAGTTGGGAAGGAAAGAACTAAAAGAAGCTAGCACCGGGACATAACTCTGGGTGAGTTATGGAAACAACAAGTTTTGTCATGGGAACCATTTGGGTCACAAGGCAAGGCAGCATATGGCTTAAGGGGCCTACTGTGAGAGTGACCAGGGTTCCAGGAGGCCCAGCGTGGTCCCAGGTAGGACTGCTGTTAGCCTGTAGGGTTAGAGAGGCCCCAAGAGCATTAGAAAAAAGCCTTTCCTCTGGGCCCACAGTCCATGTGAGCAGAGCCATGCAGGATCTTGGCCCTTAGCCACCCACACCCACTTCTGGGGGCCCTTGAGCAGTGCACAGCCTTTATCACCATCCTGGCTTATGGGGCAGGTGGGCATTGACTTGGGAATTCCACCAGCCTAACCCTGCCTGCAGACAGCTGGGGAAGCCAAGAGGTTGTTGCTCAAACAGACTAGAGTGTGAACACAGGTTTCTGCCATCATGCTAATGAACTGAGCCTTCGTTTCTTCGTCTGCAACGTAGGGGTTTTAATATTAATCATGATGCCTACAGGATAGGGATTTGGGGTGGATTCAGTGAGACCTTAAGATGTAACCAGCATAAAGCCTATTTCAATAAGTGTTAGTTTTGTTAGCATTTCTCAGTGCACTCTCAGCTGGCATCCAATCGCTGCCTGGGGCGAGTCCACCCGGTGCTAACTTCGGTGTAGTCACCCAGCATGGTCAGGTGGGGCCCAGAGATGGAAGGGCTGGAGGAGAAGAGGGGCGTGCCCAGCTTTCCCTAGTCCACAGACCATCTCACAGGAGCAGATTCCTGCCTTGGCATTAGCACTGTGGCAAGGACTCGGGCACACTGTGAATCCACCAGGGATCAGGAGGGATGGAGTCGGGGGACGGGCACGACGCCAGAGCTCCAGCCCAGGAATCCCCTTTCCCCGCCCCCCTCTTCCTTGGCTCAGTGACCTCATCCTGCTGGAATGCTATCCTCCGTGGAAGGGAGCAGTGATACACGAGCCTCATCAGCTTCTGGCCCTCAAGGGGACCATAACTGCACTGTTACTGTTTATACAATATCTGGAAGAAGAATGGTAATAGTTCTCTCAATATGGACCGCTAGGGGCTTGTGAAGAGGAGGCTAGGAAGAAAGGCAGAGGCAGCCCTGCCCCTGCTCATGGGCTGGCTCCATATTTTCTGCTTTTCTGGGATTGATTTTGTCATTGACTTGTTCAGTCACTAAGTCATGTCCGACTCTTTTTGACCCCTTGGACTGTAGCACACAAGGCCTCCCTGTCCATCAGCAACTCCCGGAGCTTGCTCAAGCTGACGTCCATCAAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCGTCAATCTTTCCGGCATCAGGGTCTTTTCCAGTGAATCGGTTCTTCGCATCAGGTGGCCAAAGCATTGGACATTCAGCTTCAGCATTAGTCCTTCCAATGAATATCCAGGATTTCCTTTAGGATGGACTGGTTTGATCTCCTTGGTGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAGAAGCATCCATTCTTCAGCACTCAGACAGATGTTAATCAGACCACTATCTTCCACGTACCTTCCTGGATCCTCTCCAGGGCACGAGCTTCTGGCCAGGCTTTCTCCAACCATCTTGTCCACACTCAGTGACAGAACAGAAGCGATGAGCCCTCGGAGGCAGGTGGCACTGACTTGCTGTGTGTGAGGCACACCTGTGCATTTGCCTGGGCAGCAGCTCCCCCTCCCCATCCTGGGACCACAGCATCAACCTCAGGCAGCTGGACCCATCTGGCCAATCCCAGGTCCCAAGCATCCAGCCAAAGGGATTGGCACAGTTGACATGTGACCCAAGTTGGGCCAATCAGGGTGCTTCCTTGAGTCTTTATACATGGCCGCTGAAAGAGCTGTTGTCTTTCCTCTGGGGTCATTGAACTAGGATAAAGCTAGGGAGAAGTGGCCCTCCCCTTCTCCCTCTGCTACCTCAAGCTCCATGAACGCTCTAGCCAAAAGATGGAAAAGATACAGAGAAAGAGATGAAAAGAGAAATGTTGGTTGTTCTCCCCTCAAGGGACTTCTCCCCTTTACGAAGTCCCTGAGGCCAGCTTTACCCTGGGCTTCTGAGTTCATGAAGGGAAGACTGTTTTGGCTGATGCTAGTTTTAGCTGGATTTCTGTCCTTCCAGATGCAGTTAGATTTGAAGGCATTTGGAAGGACCCCACTAGTCAAAATTACATCCTTTTCAGTGTCACAGGTTTATCCATTTGAGGGGTCCTGTTGGTTCAGCTTTCTGCATGGCAGCCCCCTGCTTTCATTTCAGTTCAGTTCAGTTGCTCAGTCGTGTCTGACTCTTTGCGACCCCATGAATCACAGCACTCCAGCCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCACGTCCATTGAGTCGGTGATGCCATCCAGCCATCTCATCATCTATCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCGTCAGGGTCTTTTCCAGTGAGTCAACTCTTCACATGAGGTAGCCAAAGTATTGGAGTTTCAGCTTTAGCATCAGTCCTTCCAATGAACACCCAGGACTGATCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTC TCONS_00029253 TCONS_00029252 r 5' 292 TCONS_00029253 TCONS_00029252 r 5' 292 EMBV3_38044 CCCGTCCGGACCCTCCAAGTGGAGACTCTGGGCAGCCTGGTAGATGGACGCATCTTTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40731 GCCCGAAATGCAGATCTGACCGCCCCCCTGAAGCCTCAGAAATGAAGCTTTCCCGCTCCT Gene GeneID:520694|LINGO1:XM_002696672:302_cdna UTR3_Alt 3 NULL GeneID:520694 21 GENE LINGO1 NULL leucine rich repeat and Ig domain containing 1 EMBV3_17148 TCCCAAAGGGAACCTGTTCTGTGCCTTTTACTCGGCTTGGGAGATGGGGCTAAAGAGAAG Gene GeneID:100296560|LOC100296560:XM_002686489:579_cdna Constitutive 0 NULL GeneID:100296560 3 GENE LOC100296560 NULL hypothetical protein LOC100296560 EMBV3_25537 GGGAGTAGCCCTCACTCGCCACAACTAGTGAAACCCACATGGAGCAACAAAAACTCAGAG Gene BVT0102_145191 + 1 EMBV3_03900 GK000003.2:19309323-19361110 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175933 1 XLOC_105712 NonCoding TCONS_00175933 XLOC_105712 NonCoding NonCoding - 3:19344392-19344804 - TSS130692 412 1 TCONS_00175933_1 105 0.611650485436893 1 0 0 0 0.000202151174684105 0 0.000218697777697268 0 0 0 0 0 5.55626253794336e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 6.72667537310352e-05 0 0 0 0.000259226586302632 0 XR_230546.1 LOC100847624 PREDICTED: Bos taurus uncharacterized LOC100847624 (LOC100847624), 2e-50 203 100.00 0.269417475728155 0 noncoding 0 0 0 0 0.0646447813528806 0.669950978779486 0.020622365273978 0.666366794397772 GTGGTGTCTGTCATGCCTTGACAGCAGGAAGTCCTTTCTTTTTTTTACTTTTTAATATCTGTTTATTTATGCCTGCTCTGAGTTTTTGTTGCTCCATGTGGGTTTCACTAGTTGTGGCGAGTGAGGGCTACTCTCCAGCTGTGGTGTGTGAACTTCTCGTTGCTGTGGCTTCTCATTGTGGAGCACAGGCTCTAGGGCGGGTGGGCTTTAGTAGTTGCGTCGTGTGGGGTCCTCCCGGACCAGCGATCGAGCCCTTGTCCCCTGCATTGCTAGGCAACTTCTTAACCACTGGACCACCAGGGAAGCCCAGGAAGTCCTTCTTGAATTATAACTTTCTTTCCTCCTTCTGTAGTGGCAGAATCTCTCCATGTTCTCAGTGGAGGTAGAAAGAGTGCTGGCAACTGGCAGAGTG TCONS_00172341 . 3' 2099 TCONS_00172341 . 3' 2510 EMBV3_17582 AGCCGAACGGGATCAAGATGGAGAAGTTCGTGTTTGACGTGCTCCCGTTTGCCAAGAACT Gene GeneID:100299558|UAP1L1:XM_002691711:81_cdna Constitutive 0 NULL GeneID:100299558 11 GENE UAP1L1 NULL UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 EMBV3_38616 TGCTCTGCATGCCTTGCCCTCTGGCATCAGGTGGCGTCTCTAGCCATGGACAGTCTCTGC Variant GeneID:515770|PPOX:XM_002685851:391_cdna 733^865 1 EMBV3_13699 GeneID:515770 3 GENE PPOX NULL protoporphyrinogen oxidase EMBV3_07135 GGAACACACAGACACATGCACACAGACCCCATGTCCAAACAAGTAACTGACATACGTGCA Gene GeneID:511675|RSPO1:NM_001105621:122_cdna Constitutive 0 NULL GeneID:511675 3 GENE RSPO1 NULL R-spondin homolog (Xenopus laevis) EMBV3_18840 GCACACGTGAACTGAAGGCAGGAGAGGCCAGTTAAGTTCGTAAAACATGCACCTGCAATG Gene BVV0102_054921 - 0 NULL GK000008.2:40115243-40180178 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42608 GCATGGAGGAAGGAGAGTTTTCTGAGGCCCGTGAAGACATGGTTGCCCTTGAGAAGGATT Gene GeneID:784266|LOC784266:XR_084005:71_cdna Constitutive 0 NULL GeneID:784266 21 PSEUDO LOC784266 NULL similar to mCG18413 EMBV3_11612 CAATTTGGTACCCCTTAATTCATTCTTATGGTACCCTTGCAGAGAGTTCAAAATCCACGC Gene BVT0102_055230 + 0 NULL GK000025.2:12961008-13059737 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144556 TCONS_00144550 TCONS_00144557 TCONS_00144553 TCONS_00144552 TCONS_00144555 TCONS_00144554 TCONS_00144558 TCONS_00144551 1 XLOC_088588 Coding TCONS_00144551 XLOC_088588 Coding Coding ERCC4 25:12923481-12964785 = TSS108501 6529 1 TCONS_00144551_4 916 0.0476336345535304 11 0.842190639905092 0.00360454366376791 0.00353869529571895 0.00443839147060004 0.00299720152229091 0.00311278282567237 0.000657993468833023 0.0016374849929248 0.00334344320177219 0.00245815922308294 0.000937539791257916 0.000176865889776 0.000102355683086284 0.000502034552469375 0.000446827740598155 0.000505578666935971 0.00163309672845927 0.00105159516508872 0.00179664095753881 0.00197547478679824 0.00353272310224181 0.000700742810261045 0.0012184229852564 0.00091431000253035 0.00221614919555378 0.00429793343875936 0.00349608702238464 0.00244498463064163 0.000354450259757765 0.000148233017598925 0.000557161803192684 NM_001205360.1 ERCC4 Bos taurus excision repair cross-complementing rodent repair deficiency, complementation group 4 (ERCC4), mRNA. 0.0 1.178e+04 100.00 0.999846837187931 XR_243267.1 ERCC4 PREDICTED: Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 4 (ERCC4), transcript 0.0 3213 85.21 0.432684944095574 TCONS_00144551_4 sp|Q92889|XPF_HUMAN XPF_HUMAN DNA repair endonuclease XPF; 0.0 1675 89.63 0.998908296943231 1 coding 0 0 0 0 NA NA NA NA ATGGAGCCGGGCTCGCCGGCTCGAGTGACGGCTATGGCGCCGCTTTTGGAATATGAGCGGCAGCTGGTGCTGGAACTGTTGGACGCCGACGGACTGGTAGTGTGCGCCCGCGGGCTCGGCGCGGACCGGCTCCTTTATCACTTCCTCCGGCTGCACTGCCACCCGGCGTGCCTAGTGCTGGTGCTCAACACGCAGCCGGCCGAGGAGGAGTATTTTATCAACCAGCTGAAGATAGAAGGAGTTGAACATCTCCCTCGCCGAGTAACAAATGAAATCACAGGTAGCAATCGCTATGAAGTGTACACGCAAGGCGGTGTGATATTTGCAACAAGCCGAATACTTGTAGTTGATTTCCTGACTGATAGAATACCTTCAGATTTAATTACCGGCATCTTGGTATATAGAGCTCACAGAATAATCGAGTCTTGTCAAGAAGCATTCATCTTGCGCCTCTTCAGACAGAAAAACAAACGTGGTTTTATTAAAGCCTTCACAGACAACGCTGTTGCCTTTGACACTGGCTTTTGTCACGTGGAAAGAGTGATGAGAAATCTTTTTGTAAGGAAGCTGTATCTGTGGCCAAGATTCCATGTAGCAGTAAACTCGTTTTTAGAACTGCATAAACCCGAAGTCGTAGAAATTCATGTTTCTATGACACCTGCCATGCTTGCTATACAGACTGCTATTCTGGACATCTTAAATGCCTGTTTAAAGGAATTAAAATGCCATAACCCGTCACTTGAAGTTGAAGATTTATCTTTAGAAAATGCTATTGGAAAACCTTTTGACAAGACAATTCGCCATTACTTAGATCCTTTGTGGCACCAGCTTGGAGCCAAGACTAAATCCTTGGTTCAGGATTTGAAGATATTACGAACCCTGCTGCAGTATCTCTCTCAGTATGATTGTATCACATTTCTTAATCTTCTGGAATCTCTCAGAGCAACAGAGAAGGCATTCGGTCAGAATTCAGGTTGGCTCTTTCTTGACTCCAGCACCTCAATGTTTGTAAATGCTCGAGCAAGGGTTTATCATGTTCCAGATGCAAAAATGAGTAAAAAAAGCAGACTGCCTGAAAAACTGGAGATTAAAGAAGAACAAGAAACAAAAAAGGACCTGGTCCTAGAAAGCAACCCAAAGTGGGCAGCACTCACGGAAGTTTTGAAGGAAATTGAGGCAGAGAATAAGGAGAGTGAAGTCCTTGGTGGTCCAGGACAAGTTCTCATTTGCGCAAGTGATGACAGGACCTGTTCCCAGCTGCGAGAGTACCTCACTGTCGGAGCAGAGGTCTTCTTGTTGAGACTCTACAGAAAAACCTTTGAGAAGGACAGCAAAGCCGAAGATGTATGGATGAGGTTAAGGAAGGAAGATGACTCAAAGAGAATCATGAAATCCAGCAAGAGGCCCAAAGACCTCCGAGACAAAGACAGGCCCCCTGCCAAAGAGAAGGCCCTCAGAAAGAAGAAACCAAGGTTGACTTTAACTCAGATGATGGGAAGAACTGAAGAACTAGAGGGGGAGGCGGGTGTTGAGGAGGGCAGCCCAAGAGAGCTGACCAGTAGCCCGGAGAGCTGCACAGAAGACATTAAGCACGAGGAGTTTGATATGAATGTGTCCTCCGATGCCGCCTACGGAATCCTGAAAGACCCCCTCACCATCATCCACCCGCTCCTGGGCTGCAGTGATCCCTACGCTCTGACACGCGTGCTCCATGAGGTGGAGCCGAGATACGTGGTCTTGTATGATGCAGAGCTGACCTTCGTGCGTCAGCTTGAAATTTACAGGGCGTCTCGGCCCGGGAAGCCTCTCAGGGTTTACTTTCTTATATACGGAGGTTCAACGGAGGAACAGCGCTATCTCACTGCTTTGCGGAAAGAAAAGGAAGCTTTTGAAAAGCTCATAAGGGAAAAGGCTAGCATGGTCATCCCTGAAGAAAGAGAAGGCAGAGACGAAACGAACCTCGACCTTGTGAGAGGCTGCGTGTCTGCCAATGCTACCACCGACACACGCAAAGCCGGCGGCCAGGAGCAGAATGGTACCCAGCAGAGCATCGTTGTGGACATGCGGGAGTTTCGAAGTGAGCTCCCGTCTCTGATCCACCGCCGGGGCATCGACATCGAGCCAGTGACCCTGGAGGTCGGAGACTACATCCTGACTCCGGAAATGTGCGTGGAGCGCAAGAGCATCAGTGATCTGATTGGCTCTTTGAACAACGGCCGCCTCTACAGCCAGTGCATCTCCATGTCCCGCTACTACAAGCGGCCGATGCTTCTGATCGAGTTCGACCCCACTAAGCCTTTCTCTCTCATGTCTCGCGGCGCCTTCCATCAGGAGATCTCCGGCAACGATGTCAGCTCCAAGCTCACCCTCCTCACGCTGCACTTCCCCCGGCTCCGGATCCTCTGGTGCCCCTCCCCACACGCCACTGCCGAGCTGTTTGAGGAGTTGAAGCAGAACAAGCCACAGCCAGACGCCACCACCGCCATGGCTGTGTCCGCCGATTCCGAGACTCTCCCCGAGGCAGAGAAGTATAACCCCGGTCCCCAGGACTTCTTGTTAAAAATGCCAGGGATAAATGCCAAAAACTGTCGCTCCTTGATGAACCACGTCAAGAACATCGCTGAATTAGCAAGCCTGCCCTTCGACGAGCTGGCGAGCATGCTGGGGAACACGGCCAGTGCGCGGCAGCTCTATGACTTCATTCACACCTCCTATGCAGAGGTCCTGTCCAGAGGGAAAATGAAAAAATGAGCAGTGCTGCCTATTTTCTTATCCCCTGACTGTGCTTCTGAACTGCTCTTTGCCTGCCCTCACAGATCTTTATTATTAGCCCAGTAGCTCTTTCCCGTGGGATTCCCAGGGAGCTCAGTGGTAAAGAACCTGCCTGTCAGTGCAAGAGACGCAGGTTCTATCCCCAGGTTGGGAAGACCCCTTGGAGGAGGAAATGGCAACCCACTCCAGTATTCTTGCCCGGGAAATCCCATGGAATCCCATGTAGCCTGGTGAGCTACAGTCCATGGAGTCACAAAAGAGTCAGTTTGGCGACCAAACAACAAAGCTCATTCTCTTCCAATCTGTGAGCAGTTGTGCTGTTTCCTGGGTCAGGGGACCGGAGGCCAAGGCTGGGCTCTGAGCTTTGTGTTTAGGCATCATTTTCACTGCACCATCCACGCCAGGTCTAGTACTTTCCATCTTTACCTGAGGTGTTGTCAGGATCAGGGACAGTGTCTGCAGGCATTTATAGAAGGCTGTTTATGAAACAAGCAGAGACTTCAGTTTCCTTCGGAGACTAATAAAATGCACAGTTGAGTTCTTACCCTCTGTCTGAGAGGGACCTCTGGGGCTCTGAGAAGGGAGCATCTCTGCCCCTCCTCACCAGCGCTCTCCACGCTCTCCTCAGCTGCGTGCTTCTCCTAACTGCCTGGCTCCAGGATAAGCTCATGGGACTTGCTACTGCTAATCAAAGAAAGACCACCACCTCTAGAACAGGCCAGTTGGTCTTCTGACCACCTGAAGATACACAGCATGTACCATAACCATACCTGGTTTGTTCAAAACCAGTATTTTTAAAACATAAAATGAATTACCTATTTACAGAACTGGATTGTCTAGAAGGAGCCCTAAAAATTCTGTTTCTGCATATATTTAACCTCCTGAGTCCAGTGATCTCTGACCAAATGGCTACTCCGGGAGTCTGTTAGATGCCCTCCTTCCCAGTGTCTCCTCACCTGCCCTGGGACACCCCCAGCACAGGTCCTCGCCCAGGCCCCTGCCCCCCACTCTCCTGAGCCGGACTGGCCTCCTGCGTGTCTCTGTGAGGACTGGATGCAAGCAAAGGAGGGACCCACAGTTTTTAAGGTTCAATTTTCCTTCCTTGATTTGAACTACAAGTGTTGTGAGGAAATGGAAGATCAATGCATAGAATATATAAAAATCTTAAATATATATATATATTTTAAAACTCCATAAGGAAAACAGTCTCATTGGAAACCTTCCTGTGATTGACTTGACTTAGCTTCTTACAGAAGTATACATACAGGACTTTCACAGCGTCTTTGTGCAGCTTTTAAACTTTGATATTGAACCATTATTAACTTAGATATTATTCACATATTTAGTGGTGAGTCGATCTTCTACCTCAAGAGCTGCTGTTGAAGAGCATAAGTTCCACTGGCCACATCACATAGGGTCATGTTTCGTCAGCATCAGCTGTGTTTTTATTTGTCACAGTGTCTGAACTCAGAGTAGACGGGACTGTGTGACATGAAATGGTCTTCATCTTTAATAGTCTTTCAAGTGTCATCACTAAACCACATCTGTTGTCTTGACATCTTGGTTTCTTGGTATGTTGACATAAGTTAAAGTGTGTGGATTTTGAACTCTCTGCAAGGGTACCATAAGAATGAATTAAGGGGTACCAAATTGTTATCATCAGACTCTGTAGAGTGACTTGGAAAAGAGAGAAGAGGACAAGAAACAGATTAGTTTATGGTAGAATAAAGATTTGGGATACTAACTCTGTCCCAGGGTTAAAAATACACCCTTGAGAATAGAAAATAAAATGTCAGGCACATATGTTAACTTTCACTTTCCTCTGCATTTCTTTAAGCACTCAGTCATAGTCATGTATTTTAAGTACATTAAAATAGATACCACCTCAGATAGAGATGGTTGGTATCATTTTTCTTCACTCCATCCTAGCACTTGTGCTTGAGAAATGTAATTTCTATTTTTTCCCCTAGTATAATTCCACCTGTCTTTTATTGTTCTTTCATTACATAAAAGGAAAACCCTAACAGCACATTTTTTGAGAACGGTTTCACTCCAAGTTTTCAAAAATAAGCTCTCTTAAAGCTACTGTTTTAAAATAGTCCTCGTTACCTGCTACAACATAGAAGATGGTTGTATTTAGTTAGATGTGTTTAGAGAGCCGACGTCCTCTGGCTCCCAAAGACTTACTTGCTGTTGTACCTACTAGGAGGAGGACATGGCATCCCACTCCAGTACTCTTGACTGGAGAATCCCGTGGACAGAGGAGCCTGGTGAGCTACAATCCATAGGGTTGCACAGAGTTGGATGTGACTGAAGCGACTTAGCATGCACAATGCACATACCTACAGGACATCTTAAGAGGGGGCACAGGCTCAGATGTGTTTAAATTATGGATGGTAGTTTCTAATGAACTCTAAAATGGTCATTATAATTGAAAGGCTCTTATTGCCACTTCCTCTTCCAACTAAATAGACATATCTTAGTGTCTCCAGTTCTGAAAACCCTTCAACATAACCGTCACGTATTTACTTTACATCAACTTCTTTTACGAATTTTTATAGCCTAAGAATCTGGCAAAGAACTAGAAATGCATGCAGTTGAAAAATCTTTATCACTTTGTTTTCTAGCAGCATTTTATTAGCTTTGCCCTTCTTTTTTTTTCCAAAATCACAAATATCCAATTAAGAACTTATGCTTAGCTTTTTTAAAACCTTTTTTTAAGAACTCAAGACCAGCATTATTTTAGTTTATAAGTTTTTTGCACAAAACTTTCAGTACATGAAATATTGTGAGAAATGGTTTTCAGTTTTGTTTAAATCACAGTGCCTCTCTTGATACTTTCTCAAATTATATATAAGAAATCATTTTTAATAGTGGCTATAAATAATATCCTTTTGGCAATCAGTTACTGTTTCTTTAATCTGAGGCTTAGTATATCTATGTCTGCATATGTTTGGGTACATCCAGATTGTAGTTTCCCAGCTCATGAGAGGACTGAAAACAATTATCTCATTTATCAACCCTCTGAGACGCAGAAGGTTAAGACTAGATTTGGTCGTGTTGAGAAAACAGAGTATGGAGTTAATAGATGGCCTCCAGCAGGAAAACCTACACTGAAGTGAATCCGGAGAGGTGGGTGGGGGAGAAAGACAGGCATTATTAGTCTTTGCTTTTGTTTTTCAAGCATAATTTGATTTTCTTCTGGCTCAGAAAACTTCTTTAGGGAAATTCCCTTCTCTTTTGTGTTCAGTTGAACCTAGAAATGTCCCCTTAAGAACCAACATTTTAGGAAAATTCTTTTCTCAGGCTTGAGCCTATTAAAACTTACCCAGACTTCAACATGAGTTGTCACTTCTCTTCATTATTTTGCTTTCTATTTTGGTTTATAGCTATTTCCTGTCTGATTCTGAGCCTCAGTCCTTAGTCTACCATCTTTACCCATAGTTTTTTGGTGGCCTACACCACTGTTGTGTTTTTGATTCAAGGTTTTATAAGCCAAAATTGGGATGGGAGGGATACCTAACCATTTATATCAATTTGTGACAGAGTTGTTTGTGTATGTTTTAATAAAATGTGTATTTATTCAGTATTTCAACATTCTGTGGGCAAAATAAAAACAACCAAGTGGAGTGGGAAGGAGTACATTCCCAGTACATGATAGTTACCAATGTGTTGGTACATTTAATTTAAAACTAGAGAGACTATTTAATTAGTTTTTCATACAGAATAAGTGATTAAAGCTGAAATGTGCTTTGAA EMBV3_21157 AAGGGAGAGCCCTGCAGTGCTGAGGAGCAGGTGTCCTGGGAAGACGTCCAGTGTACCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10421 GAAGAAGAGGAGCAAGCATAAGAAGAGCCGGGAACGGGCGGACGACAAGGGCAGGGACGA Gene GeneID:508218|PARF:NM_001076817:29_cdna Constitutive 0 NULL GeneID:508218 11 GENE PARF MGC142897 Rab-like GTP-binding protein 1A EMBV3_38466 CCTGGGGCCTTTACCCCTGGTTGTTCCAAGGTTCGGCTCCTGGCAGACCCCAGTGGGACT Variant GeneID:282885|PRDX5:NM_174749:476_cdna 398^529 1 EMBV3_43530 GeneID:282885 29 GENE PRDX5 Prx_V peroxiredoxin 5 EMBV3_31855 TCGGAGGCCTGGTGAGAGACAATGGCCAAGAACAAACTAAGAGGGCAGAAGTCCAGGAAT Gene GeneID:510007|MGC133577:NM_001110068:30_cdna Constitutive 0 NULL GeneID:510007 14 GENE MGC133577 NULL hypothetical protein LOC510007 EMBV3_34724 GGGGACTATGTTTATAGCACAAGATTTGGCAGTTGATTTTCTGGGGGGTGGGAGGTAGGC Gene BVV0102_119261 - 1 EMBV3_16236 GK000002.2:5167355-5181036 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101538 TCONS_00101539 1 XLOC_061700 Coding TCONS_00101539 XLOC_061700 Coding Coding MAP3K2 2:5082917-5176078 j TSS75860 12032 1 TCONS_00101539_3 591 0.0609208776595745 17 0.871028338342636 3.17313006678323e-05 5.65434354610817e-05 5.46406462658079e-05 7.04536199174692e-06 3.21061394243332e-05 1.89056866641236e-06 1.45536473288966e-05 1.70927427287727e-05 1.70746080739363e-08 3.97268908006832e-05 7.08670537768958e-06 4.18301510098653e-06 2.67730083531792e-06 5.98102334799125e-06 2.6164035631144e-06 0.00259648852460504 0.00108683981603531 0.0030450759743509 0.00015725957124363 8.51383180495123e-10 8.07152323357948e-06 0.00107985035932143 0.000726913441171445 0.00140525216719093 3.12101899728237e-05 3.51616336626812e-05 6.98161190868799e-05 0.000121142923906159 0.000171684415369224 0.000219906352482037 XM_002685232.3 MAP3K2 PREDICTED: Bos taurus mitogen-activated protein kinase kinase kinase 2 (MAP3K2), mRNA. 0.0 1.623e+04 100.00 0.747839095744681 NM_006609.4 MAP3K2 Homo sapiens mitogen-activated protein kinase kinase kinase 2 (MAP3K2), mRNA. 0.0 8395 80.44 0.747755984042553 TCONS_00101539_3 sp|Q9Y2U5|M3K2_HUMAN M3K2_HUMAN Mitogen-activated protein kinase kinase kinase 2; 0.0 1167 93.05 0.996615905245347 3 coding 1 1 1 1 -0.0212407804697218 0.901277175105769 -0.0487471249869563 0.594406845654763 CGGGGGTCCTGCGGCCCGCAGCGGCAGCGGCGACGACGACGACTACCGGGAGGCCCGGCGCTCCCAGCCGCGGAGTCGTCGCTCCCGCCCCTTCTCCAGCCTCGGCGGCACCCGGCCCGCGGCTTCCTCCTTTTCTGCCCAGCTTCCCGCGGGCCTCGGGGCCGCGGCGGCGAGAAGGAACGAGGGGCGCCGAGAGGCCCCGGCCGGCCGCCACGGTCCACGCTGCGCCCGGCGCAGGCTCCATGTGAAGGAAGGCCGGGCCTGGCCCCCGGCCCGCGCCCGACTCCTCGTGCGCCCCTCCGGTCCCCGGGGGCCCGCAGCCTCCCTCGACCGGGGGGCGCGGTGACAGGCCGCGCGGGTGCGGAGGGGTGGGTCTGCGGCTCCCTACGTCCCCGCGGAGCGGCGGGCCACAGAGAATGCTGATGGGAGAACCGTTTCCCTAATTTCCAAGTAGTCAAGCTGATTGCCATGATGGATGATCAGCAAGCTTTGAACTCAATCATGCAAGATTTGGCTGTTCTTCATAAGGCCAGTCGACCAGCATTATCCTTACAGGAAACCAGAAAAACAAAGTCCTCATCACCAAAAAAGCAGAATGATGTTCGAGTCAAATTTGAACACAGAGGAGAAAAAAGAATCCTTCAGTTCCCCAGACCAGTTAAACTGGAAGACCTGAGGTCTAAAGCTAAAATTGCCTTTGGACAGTCTATGGATCTGCATTATACCAATAATGAGTTGGTAATTCCATTAACCACCCAAGATGACTTGGACAAGGCTGTGGAACTGCTGGATCGTAGTATTCATATGAAGAGCCTCAAAATATTACTTGTAATAAATGGAAGTGCACAGGCTACTAATTTAGAGCCATTGCCATCACTAGAAGATTTGGATAATACAGTATTTGGAGCAGAGAGGAAAAAAGGACTTTCTGTAGTAGGTCCCACTAGTAGAGATAGAAGCTCCCCTCCCCCTGGATACATTCCAGATGAGTTACACCAGGTTGCCCGGAATGGGTCATTTACCAGTATCAACAGTGAAGGAGAGTTCATCCCAGAGAGCATGGACCAAATGCTGGACCCATTATCTTTAAGCAGCCCTGAAAATTCTGGCTCAGGAAGTTGTCCATCACTTGATAGCCCTCTGGATGGAGAGAGCTATCCAAAATCACGAATGCCTAGGGCACAGAGCTACCCAGATAATCATCAGGAATTTTCAGACTATGATAACCCTATCTTTGAAAAATTTGGAAAAGGAGGAACTTATCCAAGAAGGTATCATATTTCTTATCACCATCAAGACTATAATGATGGTCGTAAAACTTTTCCAAGAGCTAGAAGGACCCAGGGGACCAGCTTCCGCTCTCCTGTGAGTTTCAGTCCTACTGACCACTCCTTAAGCACCAGTAGTGGAAGCAGTATCTTTACCCCGGAGTACGATGAGAGTCGAATAAGAAGAAGGGGAAGTGACATAGACAATCCTACTTTGACTGTAATGGACATTAGCCCACCCAGCCGCTCACCTCGTGCTCCAACCAACTGGAGATTGGGCAAATTACTTGGCCAGGGAGCCTTTGGCAGGGTCTACCTCTGTTACGATGTTGATACAGGAAGAGAATTGGCTGTTAAACAAGTTCAGTTTGACCCAGATAGTCCTGAGACCAGCAAGGAAGTAAATGCACTTGAGTGTGAAATTCAGTTGTTGAAAAACTTGCTGCATGAGCGAATTGTTCAGTATTATGGCTGTTTGAGGGATCCCCAAGAAAAAACACTTTCCATATTTATGGAATATATGCCAGGGGGCTCCATTAAGGACCAATTAAAAGCATATGGAGCTCTTACTGAGAATGTGACCCGGAAATACACCCGTCAGATTCTTGAGGGAGTTCATTATTTGCACAGTAATATGATTGTTCATAGAGATATAAAAGGGACGGGAATGAAGTCTGTGACAGGCACACCGTATTGGATGAGCCCTGAAGTGATTAGTGGAGAAGGCTATGGCAGAAAAGCAGATATCTGGAGCGTGGGCTGTACTGTGGTAGAAATGCTAACTGAAAAGCCTCCTTGGGCCGAGTTTGAAGCGATGGCTGCCATCTTTAAAATCGCCACTCAGCCAACGAACCCAAAGCTGCCACCTCATGTCTCCGACTATACTCGAGACTTCCTCAAACGGATTTTTGTAGAGGCCAAACTGAGGCCGCCCGCCGACGACCTGCTGAGGCACACGTTTGTGCACTGCCACTAGCGGCCGGGGCCTCTGTGCGCCTGCCCAGCTCCCTGCTGTCCACGCACCCTCTCTCTGACTGCACTTTTCCTTGTTTATAACAGAGAGATGCGGAGGGAAAAAGACAAGAGGGAAAAGTGTTTCTCTTGATTCTTGGTTAAATTTGATTACTAATAATAATAGTAACCTAAATTTTTTATATTTAATCTTCTTTTTCCCTTATAAGAACTTGAAGCTTTTTTTTTTTTTTTTAATTTTTATAATGTACTGATGTGGTTCAGAGACATACAGCACTTTAGTACATAGTCACTCTTTTTAGTACAAAAAAATCATTGGAATACCTAAAGATTGTAGAGTCTTTCCCTGTGTCACTGACGGATTGGCAGTGATGGGGAGACAAGGAAAACGAGAAGAAAAAAATGATGTATAATTTGTAGTTTTTAGTGATAGTATTTAAAATAGATTCTCGTTTGTGGGGTTGAGCCCTAAACTTGAGTTTAGGATAGGTACTCAACTGAAAGAATATAGGTTTCTTCTTGTATCTGTATTCTTTAGATCCTAACCTCTGTCTACCAAGCTTTTTGCTCAGTAGGAATCTTGATAGAAAATATGAATCTCTAGAGGAATGTTTATTTGTTAATCCTAACCAGTATAATAAGCAAATACACTATAATAGATCCATATTACTGGAATCTATCAACCTTGAGGGATAGCTTTCTGCTTTAAAAAAAAAAAAAAGATACTGTTTTATTTTAAAGCAGATATGTGAAGTCAATAAGCAAATTCAAATTAAAAGATAGAAGACTGCTCTAATTAAATGTCTGAGAGTAGAAGAGGCCACATTTGCCAGTCAGCAGAAATGAAAAGAACCGAGTGTGGTTTAGTGCATGTTAAACTGCGTTCTTTACCTGAGGGGGAAGCCCCAAAATCAAGGGGAAGGAGAAGTGAAATCATGCATACTGTATCTTTCCAGTTCCAGCTCCTGATTCCCCGCAGGTAAACATCTTGAGGAACTGAGAGTTTAACCTGCAGTATCCATGTCTTAAAAGCTAATGTTGTGAGAGAAAACCCTTGTTCTTTGGATCACAGAGGACTAAAGTACCTCAGAAAACAGTTACCATGTAAAACAGTGGTTTTCATGGCTGGGGTGGGGATAGTTTTACCTGGCATTTGGCAATGCCTGGAGACATTTTTGGTTGTCATAAAAAAGAGGATGCTAGAGGCATCTAGTGGTTAGAGGTCATGGATGCTGCTAAACAAACTAGAATACACAAGAACAGCACCTCCCTTCCCCATCAAAGCGTTATCCTCCTCAAATATTAAAAGTGCTGAAGTTGAGAATCCCTGAGATCAATACTAGCCCTGGTTATAAACCAAAAATGGCTATGTACAAAGCAGGTTCCTTGCAAAAAGTAAATTTCAGAGAGTGATATAGTGCATAATGAGGGTTTTACAAGAGCAGAGATCACTACTTCAAGTCAAGGGTGAATGATCTGTACAAACAGCAAGGAGCAATCCTTTTCTTACCAGCTGCATATTGCACCCAAATCAGTAACTTTCATTTTGGAAATAAAATTAACTTAAACATGGAGCCTGTTGAACTCAGCCATCTGTATGTATGTATTCTTTCCTCGGAAGTCAGTTCATTCATAATTGTGGGAAAAGAAAGGCATATTAAAACAAAGTATTAACTACTTTAAACGAAGGTTAAAAACTGCCAGATATTTCTAGTATAAGAGCCAAGGACATTAAGCAGAAAGAGACTGCTGGGAAACTCCCACTATCTCTGATGGACCTGTGCTACTGAAAAACGTGAATGATATAGTGATTTGGCCACTTGCAATGTTTTCAGCATATTAGAGCAAGGGCTGAGTACTTTAAGGGTCTAGAAAATAGTATTCTTCCTGGAGGCCCTCAGTGTGATGCCTTTCATGGGATTCATAAGGGACTTGGGTATTTTATTTTCTGCTGAAAGGTATGCTTGTTTAGGAATCGTTTTAAAATACTTTGTTTCTGAAGTTAAGTAGATGTTGGTTTACTGTATCAAGGTCCTATCTGGCATTCCCTGTAGGAATATTTGAAATTCCACTAGCTAGTCTGAGAAGAAGTCAAAGCACAAATACAGCTGTTAAAGCTTCTCCTATTCCCGTATAATGAAAGGAAGCAGCTTGCAAGGAAGAATATGAATTAGTAGCCTACCTCCCACCCCCCAGAAAATCAACTGCCAAATCTTGTGCTATAAACATAGTCCCCAAGGATGTGGATCTATTATAATTTCTTCATCTTTTATGAGTGAAGGCATCTCTTCTACTTGAGCAAGACCATGGTATCTGGACCAGTGGGCTTTTCCTTCCCTTGTGCTGTGTGCTTGTGATTTTCTTTTGGCTCAATTTTGGTCTGTCAGGGTAATCAGCAGTGCAGAATATGAGACAAGTGCTCTTTAAAGAGAAACCTTGGGAGACTGTGAAACCCAAAGCAAAATGTTTGCTTTTTTCAGTCTCTCTCTCTTTCCAAAATGCTATAGAAAATAAAATCACCTGAAAAGAAACTACTATGTTAACACTGCTGCGTAAGACCTTTGTTTTATAAGAAAAATATTAGCTATGGAAAAGTATTGTTCTCTATGTAAAGACTTAAGAATAGATAATAGTTTACAGAGCTATATAAAAATGTGATGTGAATTTATTTCATACAAGTTGTTAAAGGTACCAAAAACACAAAAAAGTTAATATATATAAAAACTAGTAGAACAAAAAAGCTTAAAGTGGGGTGAGGTATGGAAGATCAAAATTAAATTTAAAAAAGAAAAATTTGAAAGCAAACACATCTATCAGGGGCTGTAACACTCCATTTTTTTTTCTTTCTAATAATGCTATGGATCAACAAATGAAATTTGAACTTTTTAGGATGACTATAAATGTGTTTTGTTTTTTAAATGCACAGCCTGATTCTTCTATACTGTAATGTTTCTTTGCTGAGGCTGGAAAATGACCAGACTGCTAACTTTGTGCCTTTAAAATGCGTTCTGCTTTGATAGTGGCAGACTTTTTGGTGCTGGAGAAGATTCACTAGCAGTCTTTTATGTGCTTTTCAGGATATACCTTTCTACTTAGGCCTTGAGAGATTCAAGATGGCATGACTTAGGCTTGGACCAAATACAAGATCTTTTACATTGCACTCAAATTATATTGAATAAAAGGGTTGAAAAATATCATAATGACTAATAGAAATTTTGATGATAATTCTTTAAAATGTATTTTAAAATATACAGACTTTGAAAGTTTCAATATGATGATCTTTAATTTTCCTCATTTACAAAACATGTTTCTAACCTGAGAAACAGTTGAAGACTACTGCCTTAGAAAAGTTTTCAAAGGCATGACAACCTTACATAATTTATATGGATTGAAATGTTAATGCATAGGCTGAACTAGAAAAGAAAAATTAAAACTTATTTCATAGTAAATTGAATTGGCTTTGAAGGAGTCTTTATCTTATTTCCAATAGAAGCTACATTTAAAAGGTGAAATTATTTCTTTAGAGTAGCTTTCTCTGCTACTTCAGTTCTTGTATATGTCAGGTCTGGTGTGTAATATTTCTGAGATGGAAGTATAATAAGGTACATGAAATTACTGAGAAAATACAATTTGAACAGTTTATAGGGACAACCAAGCTTGGGAGCAAAAGCAAATACATTTGCCAGATGCAAACTCCTTGGCCCACAGCAGAGTTCTTTGTCATTGATTTCATTTGGGACCAATAGTTCAATATAAAATCACCTAGTGTCAGCCAAGTATAGGGATCTATCTATTTTTTTTTAACATGGTGAGTCTTTTTCATTTACTTATTCAATATTGTGACTTACTATGTCAGGTATTAAGTTAACTTGTCCTTAAGGAGGTCACAGTCTAGGAGGAAAAAATGGGCAAACAATTGTTTTTTTTGACATATCTTAACTCTGAAAAGTTCGTCAGTGATGTTTTAAACTGTTATTACTTATAAGGTGAGGGGAAAGCGATTTTGGGTGGCCATTGGCTGTGATAAACTGAACAGCAGACAGCAGAAGTGCCCCAGCTGGAGAGATCTGCCACAGGTCAGGCCCCCTCTCGCTCAGGACTCTGAAAACCCAGCCTCTGTTCAGACAGTCCCAGTGATGGGGCATTTATTCCATCACATGGCACTTTTTTTTCCCCTGCTTTTTTCTTTTAAAGAAAATATTTTCTTTTGGTCTGAATTATTAAAATACCCAAAACATTTGATAGAAACTGAATTCTGCCAACAGTGTTTTTTATACTAAGATCAGGAAAATCTTGAGATCTTACTGTTTTATATGAAGTTTGGCCTTTGTTACACATGTATGTAATGTTCATATTTATTTGAATCTTAAGATTGGTTAAAATGTTAATGAAAAGCAGTTTAATTGTTAATTTTTCGTAGTGCCTTTTTCTCTGTATGCCTTAATTTTGTTTTATATCAATAATAATTCACATTACCCACCGCAATGAAAGTTTCTCCAAAATCAGTAGGCTTCAGGAGTTCCTTTGGCCTTAGACTGTGTACTGGCCATTAAACTTTTCTTAATGCCTGCTTCCTCCTACCCTTTTCTACCTCTTTTTTTTGAAAATATGTTAGAAGAGAAACATTAACATTGTTTTGTGATAGACACATTGCAGTTTTACTAGACACAAATTTCTAAGATAAGGATAGAAAGATATTTTAATTCTAAAGAGACATAGTAAATTATTTTCCAAGTTGATTAGTTGATTTTTCAATCACATTGGCACTGTTCAAATTCTTTGCATATCATGTTTCAGTTAACGATTTTCAAAGAAGAACTGGAATGGTGGTTTTTGTCCTAAAGAGATCATTTGAATGGTTTACAAATGTTAAGGCAATGAGACTTAGGGCAATGAGCAAGAAATCCAGGGATAGCAAATTCTAATCCTTACTTTTAAGCTAGCATTTTGACTAAAACTCTAGCTTTTCTGTGAAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGTTGGGGCAGGGGTGGGAAGGAAGGAAAGGTGTGAATGTCCAATTAGATTAGTCTCTGTTCTTGGAAGAACAATTTAAATATGTATAACCTACTGATGTTGGAATGCCAGCACATTTTCCAAAAGTAGCTAGTACAAACAGTTGTTTAATAAAGGTATTTATTGTAAATTGCCAAGCTCTTGGTTGCTAAAAGTAGATTAAAATTGAATTTGTATGTGTGTATAATAGCTTATATATAATTCCTAAATAGAAAGTAATTGGTTTTGCATAGTTCTTCATGAGCTCTTTGGAATAGAAATTCTGCCAGACATTATCAAAACAAGCATCCTTAGCTTACCAAGTGTTCAAAAGGAAATTGTTTTATACCTCTTTTTGGTTGGCTAGGGAAGGCGTGCTGTGAAGCTACTGTTCCTACTTGATAGTCACCTTTAGCTTTGCTTTGACTTCTGCCGCGACCTGGACAGGATGCCATAATAGTTGTGGGAGTTATCGTGCCTACTGACTCTGTGTTCACCTTTCAGAGCTGTAGCGGGTAGTGCGCTCTTAGGGCAGTTTAGAGAACCTTCTCTCGATGGTAGTGAGAGTGGACATGGTTTAGTTTCAGAAAGTTGAGGGAGGAGTCATAGCTATAGTAAAGAATAAACTTTATCTTTGCTTTGTATTACAGTCTCATGTAATTCTTCATATTTTTCAAAATTGTGCATTTTAATTGACAGTAATGCTATTTTTGTTAACAGAAAAGGCGTTAAATCAGTGATTACTATTATTCCCTATGCCTAATGACTTCTTGTTTGTATTTACAATCTGTATTATCAGAATCACTTTAAACCAAAGCTTTTATATTCTCTGCACACATAGCCAAAATGATTAGCACTGTTACTTCTGCCCAATTGTAAGCTAATAGTGTAAAAATGATAAAACAGGTACTAGTAGAATTTGTATCTCAGTCTATCCTTCAAGTTAAAGGACAGGTGCTCGGTGTTTGCATTTAGACATGCAGAATTTACTTCAACTATTAGGGAACTATATAGACATTACAGACTTGAGCTTGTACACGTGCCAATCTTATTAATGTCACTTGACCACAGATGCATATACATACACATCGACACACATGCCTCAGGTTGGGGGCGTACTTTCTTCTTAATGTCTTGACATTTATGAACTTGTGTTTGACTTGAGGGGCATTCCAGGAAAGTTTTGCAGAAAAGTAGGTTATGGACTTTTTGTGCCATAGACATTTTGGAAGACAAGGACAAGTCTGCTCTCCAGCATACATGCAGAATTTGTCCCCAAGTAGGATTTCTGAGTCCCTTAATGCCAGTTGAGGACAGTAAAGTTTGTGACTGTACTGAAAAGCACTTTTGTCTTCACTTATTTGTGTAATTAACTGTTGGTGATTTAGCATTAGCATTGCTTGGAGGGGAGAGATAAGTAACAAAATTACATCTAACTCTGTTAGACACTTAGGCTTCAAAATAGATTTGTCATATTCTCATTTTTCCAAAGACTTTTTTTCCACCTGGAATAAGAAAGAACTAGTGGAAACATTTGCGCTGGAAAGGTTTACAGGCAAAAGAAAGTAGGCCAAACCCTTGGAATATACCCCATTCAAGTGAAAGTGCAGTGTCTAAGGATAAGAATACTTCTTTAAAAACAAGCACTTGTTTTTAATACAGTCTTAGTAAGTAAAAGGTTTACATTTTTTCTATTGCTGTTGGTTTTAAAATTTGCTACCCTGCATTCTGAAATATTATAAAAGAGTTAATACCAAAAATACTTTTAATGTCTGACATCTCTTACATTTCACATGGTTCTTTTTATTCAGATATCATTGTAAATAAAAGTAAACTTGGATAAATATGAGAATAAACTTTTAATTGTTGCAAATTCTGATTATCAATTTGTAAATTTACCCTTTGACCTAATGTACATTTTTAAATGTAGCCATTAAATTCTCTATATTTAATCTGTTAGTTTCTCTCTGTAAATGTTTTTAATCTCAGTTAAATGCTGGGCAGTTTATGTACAGAGGTGTTCTTTTCCTATCAAGGTTGACTTTTTTGCACATTTTTGGAAATGTTTATTTGTACACTGATTTACTACTCTGACCAATAATTGTTGATGGGTGTGTGAGCATCGTGAATGTGTGCATTGAACTACTGTCTGTGTCTCTATGTTTAAACTTCTTTCAAGATGTAGCCATCAGTAACTGCATTGCTATTACTGATTTAGATGGACTTTCATGCTTTTACAAAGTATACTTATCTATGGTTCTATCTTTGTTGAGAACTCAGGAGTTCAACATCACTTTCTGATTTTATATGTATTCTAAAATCCATGACTAAGTTGAAAGTATGCTTGTAACTCTGTGTATTGGGGGATGTGTGTGTGGAGATGTCTTTTTCTGTCTGTAGGTATGTGTATATATCCCAGTAATTTCTTATTTTCATTTCTACATTTTTATGAACTTGTTTTATAAGGGTACTGTTTAGTTAGAATAATTAAATATATATAAAGCTTTCTGAGAGATTATTTACTATATGAATATATTTTCAGCTGGCTGATCAAAACTATTTTCTTAATTTTGTTTTTACCATTCAAAATGTATTTGTATTTCCACAGTTGATTGCAGATTTACTTAGATATCTATCAATTAAAATACTCTTGCAGAGAACATTGAATTCTCATTGAGAATTCTATGAAATGCAAATTAAGGGGAAAAAATAGGTTTTAAGCAGTAGCAAAAACACTGTCCACTAAAACAACCTTTGAATTCTCAGAGCTATGAAAAAATGTGAGAAACTAAATTATCTTGAAGAGATGTCAAGGCTTTTATATCTCCAGTTGCTGTTCGCCTGTCCTACTGTTTTTGAATATTTCCTTTATTCTACCCCAAAGATTTCAACTTTCAGTTTTCTTCTTACTGGGCAAGGTCAGACCTCACTCATAAAACAATATATTGAAAAATTGTGATTCTCTGTGATTAACTATAAATTGGTTTAGAAATGTCCAAACATACATTATTGTGTCTTTACACCGTATTTTGTATTTTAAGTAACTGGCAGAAAACGAATTGGGAATTAAATTTCCAATCTGACAATGTTGTTGTACTTAAGGAGAACCTTGTTTTTTAATATGCGGTATCATGTGAAATTACTTATGTTAGGAATAGAGTCCACTGTTGAAGTTGAATGTCACTAAGCTTATGTTACAAGGAGCCGATATGATTAGAAAAACCTACCAGAAGCCAGATACAGTGTGGTATGTGCCACATTTCATGCACATTTGACTTTGTGTTCATTCAAAATTGTGCTTGTAAAAATGTATAAAATTTTTGAGTTTTACAGTTTTTATGTACTTGTTTTTTCTTGCTGGTAAATAGCTTTTTTTTTAATCTAATGTGAAAGAAACCATGTTTATATTTTGTTAGTGATCAATGACTTTGTTTATATGGAAATTTGTATATGGTTGGCACACATCTTTGTTTAGATTTATCGTGCATGAAGGCCTGCAATAATTAGCACAATGAAAATTGCTTTTTCTTACATGTTCATTTTTTGAAAGATTGTGGTGCAAAGGCTTACTCTAAGTAACCTTCTGGACTATGGAATGAATATAAATGAATGGCACTTTGAGTGTTAATAAAGCTGATATTTATTTCCACTGTGATTGCTTTGTCCACAGCTCTTCTTGGACACACTGTTGTCTCTCCTCTGCCTGCTTTGATCACTCTCTAGGAGACAGCCTAGAAACATTGCAACTAAATCTTCCCAAGATACAAGTCTGTAATGTTCTCCTCAACGTGCTCTGGCATATTTCTCTAGATACTTTGATTACCCAAATCAGAAATTAACGGTGACTAAAAACAAAAAGACTACTGTCAGAGGGTAGAGAGTGGACACTCCCACAGTACTGGAGATCATTTAAGTTACCACTGTCATATACAGGGCAGCCTAGCAACACCAAGTCAAAAGCCTTAGAGTCTTGTATATCCTCTGACCCATCAGTTTTGTGTGTAGGAATATGATTGCAGATGTGCTAGAATATATCTATAAAAGCCCCAAATTGAGTTCTCCATGTTCAGTACTGGGGGCTGTTGTAACAAAGCACTGCAGACTGGCTGGCTTGTTTTGCTGTAGAGGCAATAAGGCCAAAGTTAAGGTGGGCTTCTCAGGTGGCTCAGTGTAAAGAATCTACCTTCAGTGCAGAAGACATGAGTTTGATTCCTGGGTCCAGAAGATCCCCTGAAGGAGGAAATGGCAACCCACTCCGTTATTCTTGCCAGGAAAATCCCATGGACAGAGGAGCCTGGGGCCATGGGGGAGTCTACAGTCTGTGGGGACATGACTGAGCATAAGCACACACAGCAACACGCACAAGGCATCATCAGGCCCGTGCTCCCCCTTAGACCTGCAGGGGAGTCCTTCCTTGCCTGTTTCGAGCTTCTGGTGGCCCCAGGCATTCTTGGCATGTGGCTATGTGGTGGTCTCCCTCTTGTTTCTTTTTTTTAAATAAGGACACCAGTCATGCAGTATCAGGGCCCACTGTAATGACCTCGTTTTAACTTGATTACCTCTAAAGACTGTATTTCCAAATAAGGTCACATTCTGAGGTACTAGAGGTTAGGATTTCAAAATATCTTTTTGTGGGAAACACAAACATACTGCAGTCTGCCCTATGGCTCCTGAAAATTCATATTTTTCCCGGGTACCAAATACTTTGACCTCATCCCAACTTTCACCCCATCCCAACTTCCCCCAAAGTCTTATTCTAACAT EMBV3_24011 AAACTGCGGTCCAACCTCATGGGCACCAAGTTCACCGTGTATGACAATGGAGTCAACCCT Gene GeneID:539051|TUB:XM_002693064:373_cdna Constitutive 0 NULL GeneID:539051 15 GENE TUB NULL tubby homolog (mouse) EMBV3_34529 TTTCCAAAGGAATGCTTCCCTCCCTGTCCTTTAGACAGCAGAATCTGTCCCCATGGAAGA Gene BVT0102_347899 + 0 NULL GK000019.2:47678474-47721575 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10695 AAAGACGAGTGGAGGGGAATGGTCTTAGCACGCGCCCCTATCATGAACACATGGTTTTAC Gene GeneID:541068|SPIN1:XM_002683680:4_cdna UTR3_Alt 2 NULL GeneID:541068 8 GENE SPIN1 NULL spindlin 1 EMBV3_00648 ATAGTCCTTTCAAGTCATGTTGTGTTTGGACTTGGGGTTGGGACAGGAAGAGCAGCAGCC Gene GeneID:281994|PPM1A:NM_174429:29_cdna Constitutive 0 NULL GeneID:281994 10 GENE PPM1A NULL protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform EMBV3_22532 CAGCAGATTCCCTCTCCAGTCACTTCTCCATCAAGGCAATAGCTGAGAAGGCCTCACACT Gene GeneID:538716|HOXC13:NM_001083490:45_cdna Constitutive 0 NULL GeneID:538716 5 GENE HOXC13 MGC143233 homeobox C13 EMBV3_11327 GCCCTTCGTGTTTCCAGACAGGACAGGACTGCACACAAGTCTTTCCTTAAGTAAATTAAG Gene GeneID:512019|ANGPTL2:NM_001109814:70_cdna Constitutive 2 NULL GeneID:512019 11 GENE ANGPTL2 NULL angiopoietin-like 2 EMBV3_28527 ACCCTACTATCATGACCCCAAAGCTGTGTGCCTGGCTGACTTTAGGTTGCTGTGTTTGTG Gene GeneID:505209|LOC505209:XM_002685878:39_cdna Constitutive 0 NULL GeneID:505209 3 GENE LOC505209 NULL similar to Olfactory receptor 420 EMBV3_35950 CCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACAATAGCTTCAATTAG Gene BVV0101_057652 - 1 EMBV3_10379 GK000022.2:53380722-53432382 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00241430 TCONS_00197074 TCONS_00137160 TCONS_00251614 TCONS_00201377 TCONS_00034471 TCONS_00143669 TCONS_00060246 TCONS_00203551 TCONS_00060247 TCONS_00254911 TCONS_00132066 12 XLOC_006328 XLOC_148094 XLOC_118739 XLOC_083370 XLOC_154555 XLOC_123023 XLOC_020687 XLOC_088090 XLOC_036632 XLOC_124202 XLOC_157843 XLOC_080699 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_21204 AGTGATTGGGGACCAGCAGCTATTTTCTCAGGATAAATGGTCCACCCAACTTCTGGGGAG Gene GeneID:515278|ELMOD2:NM_001075705:23_cdna UTR3_Alt 2 NULL GeneID:515278 17 GENE ELMOD2 MGC139980 ELMO/CED-12 domain containing 2 EMBV3_37416 AGACAGTAATCCACTCACACTTACAATAAGGCTCATCAGTGGTATCCAGTTGCCTCCCAG Gene GeneID:497026|PLCZ1:NM_001011680:26_cdna Constitutive 0 NULL GeneID:497026 5 GENE PLCZ1 PLCZ phospholipase C, zeta 1 EMBV3_21011 GATGTGACTGGAAGGAGGACAAGTGTAGGCTCAGCCTGGTCATCAACTCAGCATGTGACT Gene GeneID:100337370|LOC100337370:XM_002691957:2_cdna Constitutive 0 NULL GeneID:100337370 12 GENE LOC100337370 NULL ABCC4 protein-like EMBV3_00349 ACACCGATTCTCTGAAGAGGAACTCAAGCCCCAGCCAATCATGAAGAAGGCGAGGAAGAT Gene GeneID:503577|DBP:NM_001037445:109_cdna Constitutive 0 NULL GeneID:503577 18 GENE DBP MGC129133 D site of albumin promoter (albumin D-box) binding protein EMBV3_42468 CACATGCAGGAGAACAGGGGTTGGCACGTGGAGCTGGACGCCTGCCTAGACCAAGATGCA Gene GeneID:531296|MSLNL:XM_002697972:709_cdna Constitutive 0 NULL GeneID:531296 25 GENE MSLNL NULL mesothelin-like EMBV3_04472 TGGCCACCAGGGTCTTACTCTTTGTACCTGGATTCCTCAAAGCCTCATCGCCTAAGAAAG Gene BVV0102_102796 + 0 NULL GK000015.2:16164156-16242000 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060600 1 XLOC_036786 Coding TCONS_00060600 XLOC_036786 Coding Coding FUT4 15:16236271-16243407 o TSS45290 7136 1 TCONS_00060600_1 398 0.26177130044843 1 0 2.84753110000413e-12 0 1.11199743052833e-05 0 5.33554185952203e-13 1.0297242567145e-12 8.31627765420098e-13 7.35210906327173e-13 1.63373857466579e-12 9.22534221259708e-06 1.57856548373456e-06 3.70092207011808e-06 4.33011209203111e-07 0 8.44810913194222e-13 0.00156229766480597 0.00126060523663116 0.000243973612698214 0 1.2198496138151e-12 6.45102220967579e-13 0.000869972905867778 0.000473469920920546 0.000703543149833184 1.19405277367938e-05 1.44312786947717e-12 1.22377210778249e-12 0.000127891784770962 8.97299966510653e-05 9.54598444907539e-05 NM_174736.2 FUT4 Bos taurus fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) (FUT4), mRNA. 0.0 2495 99.36 0.197029147982063 NM_002033.3 FUT4 Homo sapiens fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) (FUT4), mRNA. 0.0 1719 76.40 0.332258968609865 TCONS_00060600_1 sp|Q8HZR3|FUT4_BOVIN FUT4_BOVIN Alpha-(1,3)-fucosyltransferase; 0.0 809 99.25 0.99748743718593 1 coding 0 0 0 0 0.0143302594558172 0.925007379991571 0.0282210062533909 0.568352492763831 CGGGCGGCGGCGGCGGCGGCGGCTCTGCCCGCGCTCGCCATGCGCGCGCGCTGGGGCCGGCGGGGCGCCCGGCGCGGAGGTCCGGGGCTGCCCGGCACCCACTTGGCGCTGCTGGCCGCCAGCCTGCTGTCCACCGCCGTGGCCATCTACGTTTGCTGGAAGCAGCTGCCGCCTCTGCCCTGGGCGTCCCCCAGCCCGCCGCGGCCGGTGAACGTGCTGCTGTGGTGGGAGCCCTTCAGGGGCCGACACAACCCCCGCAGGCCGCCCCCCGACTGCCAGCGGCGCTTCAACATCAGCGGCTGCGTCCTGCACACGGATCGCGCGGCCTACGAGGAGGCCCAGGCGGTGCTCTTCCACCACCGAGACCTGGTGAAGGGACCCCCGGACTGGCCCCCGCCCTGGGGCGTCCAGATGCCCCCGGTGGAGGAGCGGGAAGGGCTGGTGATGGACGACGAGGGGCAAGAGGCTGAGGCCGAAACCTCGGCCGCCCTGGGCCCCCGGCCCCCGGGCCAGCGCTGGGTGTGGATGAACTTCGAGTCGCCCTCCCACTCCCCAGGGTTGCAGGGCCTGGCAGGTAACATCTTCAACTGGACGCTCTCCTACAGGGCCGACTCGGACATCTTCGTGCCTTACGGCTACCTCTACCCCAGGACCCATCCCAGCGAGCAGCCGCCGGGGCTGGTCCCACCGCTGGCCCGGAAGCAGGGGCTGGTGGCCTGGGTGGTGAGCAACTGGGATGAGCGCCAGGCGCGCGTGCGCTACTACCGCCAGCTGAGTCAATACGTGACCGTGGACGTGTTCGGCAAGGGCGGGCCCGGGCAGCCGCTGCCCGACGCAGAGCTCGTGCACACGGTGGCCCGCTACAAGTTCTACCTGGCCTTCGAGAACTCGCAGCACCTGGATTATATCACCGAGAAGCTGTGGCGCAACGCCTTCCTGGCCGGGGCCGTGCCGGTCGTGCTGGGCCCCAACCGTACCAATTACGAGCGCTTCGTGCCCTCCAATGCCTTCATCCACGTGGACGACTTCCCTTCTGCCTCCTCCCTGGCCGCCCACCTGCAGTTCCTGGACCGCAACCCGACTGTCTATCGCGGCTACTTCAGGTGGCGCCGGAGCCATGCCGTGCATGTCACCTCCTTCTGGGATGAGCCCTGGTGCCTGGCCTGCCAGGCTGTGCAGAAGGCTGGGAACCAACGCAAGAGCGTCCCCAACTTGGCTGGCTGGTTTCAACAGTGAGGTCATTGTCCCCCTGGGTGTGACCCTGGAAGCCATGTCTGGATGCTCTGCGGTGCCTCTCCTTGACGGCCAAGTCGTGGGACTGCATTTCCTAAATACCCGTTTTTAATCTATGGGAACAAATTGATTTACCAATTAATGTCATTCAACACAAAGACTGGGTGGGAAGGATCCTGGGTGCTCATGGCTTTTGCATAACTCGCGGTTGTCCGAGGGCATCCGAGCTCAGGGATGAAGAAGGGGACGTTTCCTCCTCATTTTAAGGTGAGGAAACAGCTTACCTACAAGAAACCATGGTCTGTGGCTCTGAATTTCCTCATCAGCCACAGGCTATATTTGTGACCTGTGCTGAGTCCAAATTTCACAGACTCCTCCAGTCACATGTCCCTGGGCCAAATGCTGCAAAACCCTGGTTTTAGAAAGAGCCTTTTTGCAGGATAGTGAAGGGACTGTGGCCACCAGGGTCTTACTCTTTGTACCTGGATTCCTCAAAGCCTCATCGCCTAAGAAAGGTGAGGAGGGTGATCCAAGACTCCATTGACTTCAGTAACAACTACTGTTGTTTGTTCCCCTGCTTTATGAATGGAAACAAGATGCTGGATTGTCCTTGGAGAAGAGGGAGAGTGAATATTTGGTGTACCTCGCTTTATACAAATGTATTCCTGAAAGGCCGCTTTTTAATCAAATCCACTGTTATAAGAGAGCGCAGTGTTTATGGAACCCTGTGGAGAATCCCTTTACAATGTGAATAATCATCTCCTGTTTTCTTCTGTATCCGTTTTTCTATAACCTGGGTTTTTAAAAAAGCATAATTATAGATGTGAAAATAAAGCAGAAGCAACCTTCTTCTCCCTTCATCCCAGAAATCCAGCCTGTGTTTACATAGAAAAGGAAGCCATACTGTCATTTTCCACAGAATTATTTATTTTTGTGTCTTTACGGGAGCTGAAATTTAAACCCAGAAAGTCAGTCCTCCAGGGGTGCTGGCATTACCCCTCTGCAGAACAGAGAGTGAGATTGCACTGTATTATGGAATCATGCAAAAGGAAAAAAGTCTGGTGGCTGTTAATGGCAGTTTTTGACTCTTGTCAGTTTGAAGTTAAATGGTTGCTAGGGAATAGAACTAAATCTGTGCCTGCAGTAAAACTTTATCTTTTGTTACAAAAATCTGCAATTCTGCCTGGGGCCACCGGATTTCTGGTCTGCCCAGTAGTACGTTCGTGGACGTGCTTAGTTGCTCCGTCATGTCTGACTCTTTGTGACCCTATGGACTGTAGCCTGCCAGGCTTTTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCTATTCCCTTCTCCAGGGGATCTTTCTGACCCAGGAATCAAACCCAGGTCTCCTGCATTGCAGGCAGATTCTTTACCATCCAGATACAAACATTTCTATGGCCCTTGAGACTGTGCTGTGGGACCAACTTTGAAACTATATTCATTGACTAAAAACTGTGGAATGAACAGCATGTTAGGTGTCACCATGTACCTGCACTGTGTGAGACCCTGAGTGTGAGAAAGACAAAAATATGTAAGACAAGGTCCCTATCATTAAGGCTGTTGAAATCTACTTTTGTCAGAAAGCAATTGGCAGAACTTATTTGTTAAAGTAACATTCTTTTTTTTTAATTAACATTGTTGATTTACAATGTGATGTTAGTTTCAGGTATACACCCAAGTGATTGAGTTGTGTATATATATGTAATATATAATACGTATATTATCTATGCATGCTAAGTAGCTTCAGTCGTGTCCAGCTCTTTGTAACCCTATGGACTGTAGTCCTACAGGCTTCTCTGTCCATGGGTTTCTCCAGACAAGAATACTGGAGTGGGTAAACATTCTTTCTGACCCACAGATTGAACCCGAGTCTCTTATGTCTCCTGCATTGACAGGCCAGTTCTTTACCCCTAAGGCCACCTGGGAAGCCCTACATTCTCTATAACATATATTATAGGTATATATATTCTTTTTCAGATTCTTCTCCATTATAGCTTATTACAAGATATTGAATATAGTTCTCTGTGATATACAGTAGGTCCTTGTTATCTGTTTTACATATAATAGTATGTATCTGTTAATCCCAAACTCCTAATTTGAAGAGGAAGAATAAATTAGTGACATTAATAATAAATTAATAATAATTATTATTAATGTATTAAATTAATAATAAATAATAAAGTGACATTAATAGTACCATAAATCAATTATTAGAAAGCCAGTTGATTTAAAGCCTAAAATAATGGGCTCTTTTTTTCCTCTTTGATTTATTATAAGCACCCTCAGTGACTAATTATGGATGAGGTCCAACATTAATTAGGTTTATACAGAATTCTGCTGTAAACAGTAATTTTGCATTTGATTAGTACAATGAGCTGATTCATGAAGTAACTTGTCTGTGAGCATTTGTTGCAGACTTGAAAAACTCACTAAAATCTAGGTGCTTCAGTTCTTCCTTTTCCTTAAAAAGAGAAATTGAAATCCCTGGATAAAATTTCTCATTGAAATATTATAGCATGGGCAGAATTACAGTATCAAAGTAGAGTCATTCAGTAAAGAAGGAAAAATTCTACTCTTTAAATAACTATTTATGACTTATTGGCCAATGATCTTGGGGTTATTGGAAATCTACATGGGACAGTTGGGAGATAGTTTGGATTTTAAAGGTACTCTGGCTTAGATTTGAATTCCAGCCATGTGACCTCAGGCAAATTGGTAATAACCCTGGGCCTCAGTTTTCTCATCTGTAAAATGGAGCAGGAATTGGCTTCATAGCAGCTTATGAGCTGTTCAGAGAATAAATAAAAAGGTGTCTAACACGTAGTGGTGACTCAATTGGTGACAGAAAAATAGGGTTTTTTCCCCTTCTTGGAGTGATTTCAGGTTGCCTCCATATCCGCTTATATGGATTATGAAATTAAATCTCAAGATATGTTACAGAATATATCTGAAATAAAAAGCAAGTGACCTCATATCATGTATTTCAAATGAATCCCTAAAGCTAGCCATACTTGCTATTCAAGATGCATCATTGCTGTTTAGATTGAGCTTGAATTTGCAGGGTAGGAAGAAGCACCTATGCTTTCTTTGAAAAAAATTTTGTTTTAAATTTGTTTTGTTATATTAAGTTTTTGTTAAGTTATATTAAGTATTATTTTACTACTACTCTCTTTAGTATTAAGTCTGTTTAAAACTAACCATGTATTTTTTTATTGCTAAGCATGAGGAAGGTATAATTGCAGTTTTATTCATGGGAAAATCCTAGGTAAGGAAAAAAACAATTTATTTTAAGGCTAATCTCATCAAATAGCAAGAGAAATGGGCAATTGTTCATTTTATGTAATTTCATTTTTCAAGTCATTCTAAGTTGAGCAGTTTAAAATTTCATATATGTTAGTACAAAAATACATAGAAATACATCACCTTCTAAAATGGCTTTCTTAAACTTTTCTTTCCAATTTATTACAAATTTAATTTACTAGTTTTAGTGCTTGATGACTTTAATTACCAGTGCACCTGGAATGATATTGACAACAGGAAGACAGTCTGACTCACCTTTAGTATTCACAGGTCTTTTCCAGTTTCCAAACCCTTCCTTAGCAGTAATTTAGAAGAGATAGGGTAGCTTCATGGAAGGAGCTCACAATCTGGAGTCCAAACCTGGGTATGTGGTTCTGCCACTGCCTCTGTGACCCTGATTAGGCAAGTTACTTAAATTAACTTCCTCCTTTATAGTGAGTGAATGACCCTTGCAAAACAAGGATTAAATGTGTTGACATTTGCCAAGGTGCTTTGAAATTGTAAAATCCTGTACAGTTTCAGTGTACTCTAAATTTTCAAAGCTCTAAAGCAGGTATCAGCATACATTTTTTCTGTAAAGAACCAGAGAGTAAATATTTCAGGTTTTACTGACAATACAATCTCTATTGCCTCTACTAATCTCTGCTGTTGGTGATGCAAAGGCAGCCACTGCCTATCTGTAAACAAAGGCGTTGCCATAGTTTGTTAACTCTGCTGTAGACTTTCAGAGCTAGAGGAATTTGAGAAGTTTCCTGATGGAGTTTTCTTAGAAGGGATTTAAGAATTGGCATCTGAGAATCTTGGAGCTAGTTATTCCTAGATTACTAGGCCAGCTTTGCAGCATTTCCCAATTGTCTTATCGGGGGCAAATTATTTAAGCTTTCTGTGTTTTGATAGTCTCATCTCTAATTGAAGGTAATTATATATAATATATGAAGGTGTTGGGAGAATTAGACACTTAGAGTACTCAGGACAGTATGGGAAACATAGGAAGCACCTGAGAGATGTTAGCTGTGATGATCACCTGTCCATTTTACAGAGAAGGGAGTGGAAGTCCAGATGTAGTTAAGGACTTGTCTAAGACTACAGTAATAGTTGGGGCTTGCCTGGTGGCTCACATGGTAAAGAATCTGCCTGCAATGCAGGAGACCCGAGTTCGGGTGGAATGGAAAAGATCCCCTGGAGAAGGGCATGGCAACCCACTCCAGTATTCTTGCCTAGAGAATTCCATGGACAGAGGAGCCTGGCAGGCTAAAGTCCATGGTGTCACAGAGTTGAACACAACTGGAGCTACTAACACTTCCAGTTTTACTTCACAGTAATAGTGGCAGAACCAGACATGCTTGTGCAACAACCCCTTTGAGCCTTTGTCACTTGAACTGAAAAATGAGGGGGTTGGACAACAGCATCTCTCACAACCTTCTAGTTCCATTGCCCTTACTCTACTAACTGACACCCTAGGGCTTAAAGAACGAATTTACCTCCCTAAGTGCCTTCCAGTCTGGAAATTATTTACTATGCAGCATCAGTAAATTGTCACACACACACACACACACAAAATGCAGGCACCAGAGAGGGCGACTCTGATGTGGCATTAATATAAAATAAATATATTTTTATAGAATATGTAATTATAAATATTATACATTGTATATGTGAACATATTGTTGTTCAGTCGCTAAGTCATGTCTGACTCTTTGCAACCCCTCGGACTGCAGCTCATCAAGCTCCCCTGTCTCCCACTATCTCCTGGAGTTTGTCAAATTCAATGTCTGTAGAGTCAATGATACTATCTAACTATCTCATCCTCCACCAGTCCCTTTTCCTTTTGCCTTCAGTCTTTCTCACCATCAGGGTCTTTTCCAGTGAGTCGATTCTTCGCATCAGGTGGCTAAAGTATTGGAGCTTCAGCTTCAGCACCAGTCATCCCAATGAGAATATTCAGGGTTGATTTCCTTTAGGATTGACTGGTTTGATCTCCTTGCTGTCCAAAGGACTCAAGAATCTTCTCCAGGAGTACAATTCAAAAGCATCGATTCTTCAGTGCTCAGCCTTCTTTATAGTCCAACTGTCACATCTGTATATGACTGCTGGAGAAACCATAGCTTTGACTATATGGACCTTTGTCAGCAAAGTGATGTCTCTGCTTTTTAATATGCTGTCTAGGTTTTTCATGTCTTTCCTTCCAAGGAGCAAGTATCTTTTAATTTCATGGCTGCAGTCACTGTCCACAGTGATTTGGGAGACCAAGAAAATAAAATCTGTTACTGCATCCACTTCTTCCCCGTCTCCTTGCCATGAACTGATGGGACTGGATGCCATGACCTTAAGTTTTTTGATGTTGTGTGTATATACATGTATGATACATCACATGCCTTAAGTATCAGAGAAGGGAGCCAAGTCCTTGGCAATTAGTATGGTAAATAATTGCATTGAATACATTTCAATCATTTTTAAATGTTTCTCAGGGACTTTTAAGGTGCACATTCTAATACAAATTGAGTATTTATGTACCCAAGTTCAGATTATTTTGACAAAATGATTAAAGCAATGAGATGAAAAAT TCONS_00060601 s 5' 0 TCONS_00060601 s 5' 0 EMBV3_33037 TACAAGCCCCGTGTCGACACTAACGGGACTTTAATAAGACGGCTAAGAGGTAACGGGAGC Gene BVT0102_184353 + 0 NULL GK000030.2:1-148823899 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41509 GGGTGATGGGGGGAGCTAATGAACTAGGGAGAAAAACTTTTCATGTGTGCAGTATCGTCT Gene GeneID:282319|PPP1R8:NM_174582:33_cdna Constitutive 3 NULL GeneID:282319 2 GENE PPP1R8 NULL protein phosphatase 1, regulatory (inhibitor) subunit 8 EMBV3_17941 GTTCTGGGAACGCGCTGTGCGGTATTACTGTCTTCATTTCACCGACTGATGGACCGAAGC Gene BVT0101_025609 + 0 NULL GK000007.2:6382700-6385006 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211628 1 XLOC_129935 Coding TCONS_00211628 XLOC_129935 Coding Coding MED26 7:6342025-6384787 = TSS158977 5219 1 TCONS_00211628_4 599 0.053650124544932 3 0.878019690839784 7.07077824262154e-05 0.000146598739208329 0.000148509346466398 6.26725780602761e-05 1.163004316432e-05 1.84646046164477e-05 0.00011480849410762 8.88228492776087e-05 0.000279670020617306 0.000236785206534951 2.15116654500221e-05 0.000399429448064208 0.000142671323215707 0.000563143758139977 2.62031486755627e-07 0.00203944470421627 1.55569914390207e-05 0.00102882537048168 0.000214573412497565 9.12833028451329e-05 2.42512173597229e-05 0.000342115330774449 0.000656628615478973 0.00070701296766377 0.000380639226360177 7.68004051735535e-05 0.000387316879889829 0.00032666512550982 0.000142316605822241 0.000668155782670731 NM_001098888.1 MED26 Bos taurus mediator complex subunit 26 (MED26), mRNA. 0.0 5640 99.97 0.599731749377275 NM_004831.3 MED26 Homo sapiens mediator complex subunit 26 (MED26), mRNA. 0.0 3876 87.31 0.600114964552596 TCONS_00211628_4 sp|A5PK23|MED26_BOVIN MED26_BOVIN Mediator of RNA polymerase II transcription subunit 26; 0.0 1212 100.00 0.998330550918197 1 coding 0 0 0 0 -0.165439243449063 0.299520582108793 -0.0242100256322373 0.666648553833643 ACTGGAGTTTGGTTCTCGAGGCGGCGGCAGCAGCGGCGACGGCTCCGGCGGCTCCTCCTCCTCCTCTGGTGGTGGCGGCGCCCCGGGCCTGAGCCCCGGCCCCGGCTCACCTCTCCGTCACCCCGCGCGCCCCCTCTTTCCCCGGCGCCGCGGGGAACATGAGGCTCCGCTCCCGGAGGCCGGCGAGTGAGTGACCCCGGTCCTCCGCCTCAGCCCGCCCGCCCGCTGGCCCGGCCGCTCCCCCCCCGCCTCGCCCAGGCAATGACAGCGGCTCCGCCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGGCCATCGACCCTCAGAGCAACATCCGGAACATGGTGGCGGTGCAGGAAGTCATCTCCAGCCTGGAGAAATACCCCATTACCAAAGAGGCACTGGAGGAAACCCGCCTTGGGAAGCTCATCAACGACGTCCGCAAGAAGACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCCCGTGCACCAGAATGAGGCTGCGCTGCGGGGGCTGGCGGGTGCCCCCGGCTCAGCCAACGGCGGTGCCCATAACTGCCGGCCAGAGGCAGGGGCGGCCGGCCCGCCTAAGAGTGTCCACGACCTGAAGTACCGCAATGACATGCCAAGGCTGTGCGGGCAGCGGCTGGACAGGTTGGGCAGCCGCAAGCGCCGGGGAGACCAGCGTGACCTTGGTCACCCTGGGCCACCTCCCAAGGTCTCCAAGGCGAGCCATGACTCCCTGGTACCCAACTCATCCCCGCTCCCCACCAATGGGATCAGCGGGAGTCCCGAGAGCTTCCCCAGCCCCCTGGACAGCAGTGGGCACGTGGGCCCTGAGGGCAACCGCCTGGAGCACGGCGAGAACGACAAGCACAGTGGCAAGATCCCCGTCAATGCCGTGAGGCCGCACACCAGCTCCCCGGGCCTGGGCAAGCCCCCCGGGCCCTGTTTGCAGACGAAGGCTGTGGTGCTGCAGCAGTTGGACAAGGTGGACGAGACTCCAGGGCCCCCCCACCCCAAGGGGCCACCTCGCTGCTCTCTTGGTTCCCGGAACTCACGGCACGAGGGCTCCTTTGCCCGGCAGCGGAGCCCGTACACGTACAAGGGCTCCCTGCCCAGCCCATCACCTCGGCCCCAGTCGCTGGATGCCACGCAGGTGCCATCACCGCTTCCGTTGGCCCAGCCGTCCACGCCCCCTGTGCGGCGACTCGAGCTGTTGCCCAGCGCAGAGAGCCCTGTGCGCTGGCTGGAGCAGCCAGAGGGCCACCAGCGGCTTGCAGGGTTGGGCTGCAAGGCGGGGCTGCCGCCGGCCGAGCCCCTCCTGCCCCGGGCAGGCTTCTCCCCAGACTCCTCCAAGGCGGACAGCGATGCTGCCTCCTCTGGTGGGTCAGACAGCAAAAAGAAGAAGAGGTACCGGCCTCGTGACTACACGGTTAACTTGGACGGGCAGGTGGCTGAGGCTGGTGTCAAGCCTGTCCGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCATGACAAGACAGATCAAACCTCTGACCCAGAAAGAGCCAGTGCGGGCCGACAGCCCCGTGCACACGGAGCAGCCCAGGACAGAGCTGGACAAGCCCGAGGCCAAGGCCAGCCTCCAGAGCCCTTTTGAACAGACGAACTGGAAGGAACTGTCGCGCAACGAGATCATCCAGTCCTACCTGAGCCGGCAGAGCAGCCTGCTCTCGTCGTCGGGCGCACAGACCCCGGGCGCTCACCACTTCATGTCCGAGTACCTGAAGCAGGAGGAAAGCACTCGGCGCGGGGCCCGGAAGCCGCACGTGCTGGTGCCTCATGGCCCGCCCACGGACTTCCCTGGGCTGAGCCGCGAGGTCACCCGGGACGATCTGGACAAAATCCAGGCCCACCAGTGGCCAGGGGTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGACCCGCACGGCGACGACGGGCGGTTGAACATTCTGCCTTATGTCTGCTTGGACTGACCGGCCCTTCGGGCTCTAAGTGCATTCCCACCTTGCAGTCAGCCAGGGAGGACGGGCGCCAGGGCCCGCCGCCTCCAGTGGTTGGGAATCCGGGGGGTCCGGCCCGGGGCGGGAGGGAGGGGGCGAGAGTCTCTAGGTCTCTCTGCACTCATCCCTCTAAATTCTCCTTTTGTGAAATGCTGCTACCAGTTTACTAACAAAATTGCAAAGGAAGGACCGCGTGAAAGGAAGGCCAGCAAAGTGAGTTCAGAACTCTATAGCAAACCAGCTATAAAAAGCGTTAGTCTCCCACCCCAGAAGAGGTGCGGATGCTTCCCAGCCCTGGTGAGCTGGGACCTCAGTTGCAGGCAGGCACAGAAAACCTGTGGGAGAGGTTACCTTTAACACAGTGACAGAAGCACGCATCTCATCTTTGCATTTTCTGTTTTTAACATGGCCCTAAGCGTCTGAGGCAGTGGGCAGTACTGTGGCCTCGGTTTGCACCCCATTGGCCAGCTTTCCCATCACGGTGCCTCAGCTGTAGTGAGCTGCTGGCATCAGGCAGGCCGGCTGGCCACCCAGTTCGACCCATGCTCCCTGGGCGTCCACACATTTGTATCTGGTTTCAGTTACAGCCCAGTTTTTAAAGAAATGCTGCAGAAATTTGTTTTCTAAAGTTTATTTTGCCCCCTCTTCCATCTGACCACCAGACAAGTAACTTGCCTTTTGTTCTTCCCTCTTCAGTTTCCCCTTCCCACACATATCTAGAAAAGTTCACCTTTCTAGACTTCCCTTCCCTTCAAAACACAAAAGTAACCGCGGGTGCTACTGGTGTGTAAGCTGTACTGTTGGGCGAGAAGAGACCTGTCTGTATGCTGGAAACACTCATAACCATTCCTTTAGATTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCTGTGTTCTCAGGACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGATATAAATGTGGAAATAATAAAAAAAAAAAACATTTGCACAAACCAGTCTGAGAATTGTTTTTTAATTTGGTCCTTTATAGCCACATTCATCCTCTCTGGATTCTGGATTAGCCAAGACAACCTGGACCCCATATCCAAGGTTCAGGTCCTATAGCTAGCCAGGCTGTGGGGAGGTGGGCAGGGCAGTCACCAAGTCCAGCCTATTAGCCTTCTGCATGGAGACTGACCTCTACCTTGCCTTTCATTCATTCAGGGTCACAATGCCTCTCCCACCTCCAGAGTCATCTGCTAACTCTGGGTGACAGAGTCGGAGAGACCACATCTGTCTCCATTCCAGACCTCACTTTCCCTAGAAACAGCTTTGCCCTCCCAAGCAGGCTCCACAACCCAGGTCTCAAGTGACCTTGTCTTACCCCTGAAATATTTGCAGTTCTTCCTTAACTATAAAGTGATGATCTTTTAATTCTTCTCCCTCATCTCTGAAACCATAAGCTTTGGCTTTCTATTTTTTTCAGTCTGGAATAATAAGTCATCTTGACCATATTTACTTGATGTCAGATGAAGAATCAACTCCCCCTTTAGAGGAGCAGCCCCACCAGGCAAATCAGGAGGTCCAGAAACATGCAATCAACCCAGAGCCACAGTTGCAGAGCCTTGGGGAATTCTGACATAGCCCTGGTGCAGGGCATACCCTCTCCTACAAGAGGGTGAAGTAGCTTTGAGGGCAGCCCCTGCCATCTACCACCTGTATGGAGCTGGGCTAATCACTTTACTCCTATACACCTGTCCCCATTTGGGAGATATAAATGATACCCCAAAGCTGTGAGGATTAAATTATATGATCCAAATTTAGCGGTGGGGAGGGGGGGCAAAAAGCTTGTCATCAGGACCATTTGTGCTGGGGAATAACTAGTTTCCTCAGTCCACTGTGCCTGTTTTCTCACATGTATTGTGGCCAGCTGACATGTGGGCATCCTGAGGATGACATCCTCCCGACAAAGGGTCAGAGGCACAGCTGGAAGCTATTAAGGTGCAGGTTGGCGCCCCATGAGCATCTCCTTTTCTCAGACCTGGGCTCTGAGGGAGGTCACTGCTCCTTAACCCCCTGCAGGCCCCACCTCTCCTGTGTCTGAGTATCTAGTAAGCCCTAGGGTACGGATACTGCCTGACTCAGAACACAAGGTTAAGCTGTGACTTCCCATCAACATTTTGCGGATCAAGTTGGGTTGCCACTTTTTAATTTGCCAAGTAAAGATAGAGTAGAAGGAAAATTTTACATTCCCTATCGCCCCCAAAGTTGGAAGTACATGATTTTTGAAACAAAGTCCTGCAGTGTAAGATCATCTTGCTGAAAACACCGCTTTGTTTTCCGTTGCGGCTTTGGGCTGCTCTATCCCAACCGGTCCTTGAGCATCAGCAGTAGGGGTCAGCACCACGCCCCTCCCTCCTGCAGATCCCTAGAGACAGGTGCCCGAGGAGGTTGCCATTACTGCGACTCCCAAACTTGCCAGAGGACCCATGCCACGTCGCTTCCCTTCCCTGGGCTTCGGTCCATCAGTCGGTGAAATGAAGACAGTAATACCGCACAGCGCGTTCCCAGAACGTGCTTCCAGGGCGCTCTGGGCTGGTCCTTTTGTTGGAGTGCGGCCACGGGAGTTCGCTCCCGGTTTGCAGAAAGAATTTAGCCCATGGAGAGGTTTTCACCATTCGGTTTCTCTTCCCGTAAGGTCTGGTCTTTTACCTTTGTCTTCCGACCATCAGGAATCTGGCTGGAGGGCGCCAATGAAGCCCGGATATCGAGGTTTGACCCGCGAACTCGATCGCCCGCTCACAGACACCGACATAGCGGTCCCTCCCGCCCTTCCTGTGTGTGCTCCGGGACCCAGTTAGGCTCCCTCAGGCCAGCCCACTTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTCTAGGGTCGCACAGAGTCGGACACTACCGAAGCGACGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGACAGCCTACTGCTCTCAGAGCCCTTCGGGGCTCACGGTCCCCTTTCCTTCCGC EMBV3_11286 TGGGTGTCAGAGCCCAGCACTACTTTTTATTACAGGAGAGGGAGGGGGGTATGGAAAAGT Gene GeneID:326578|SNW1:NM_001077834:79_cdna Constitutive 0 NULL GeneID:326578 10 GENE SNW1 NCOA-62 SKIIP SNW domain containing 1 EMBV3_02399 GACTGAGCTACGTGGGAAGCCCATATTGTATGCTGAGAAAGAGCAAAAGAGCTTACTTGC Gene GeneID:536269|MTHFD2L:XM_002688352:145_cdna UTR3_Alt 3 NULL GeneID:536269 6 GENE MTHFD2L NULL methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like EMBV3_12920 GAAGGTGGCTTCCGCCAAGTCAAGGAGGCTGTCATGCGGTACCTGCAGACCCTTGGCTGA Gene GeneID:531079|TIRAP:NM_001039962:23_cdna Constitutive 0 NULL GeneID:531079 29 GENE TIRAP NULL toll-interleukin 1 receptor (TIR) domain containing adaptor protein EMBV3_30087 CACAGAAGATAAAACTATTGAGTCACCAGAACTATCTTCATTGTGACCAAACACAATGAA Gene GeneID:444867|NOD2:NM_001002889:93_cdna Constitutive 2 NULL GeneID:444867 18 GENE NOD2 CARD15 nucleotide-binding oligomerization domain containing 2 EMBV3_39628 TGCACAGCTGAAGAATCGGGAGCTGGACAAGTTCCGAACAGAGTTGGATTCGATCTTGGA Gene GeneID:512152|LOC512152:XM_002683693:10_cdna Constitutive 0 NULL GeneID:512152 9 GENE LOC512152 NULL similar to KIAA1009 protein EMBV3_36310 CCCCAGCATCCCCCTGCGCTGGACAGTGTTTAGCTCCGGGCCCATGACTCTCTGACAGCT Variant GeneID:509773|TMEM54:NM_001034364:85_cdna 429^788 1 EMBV3_05678 GeneID:509773 2 GENE TMEM54 MGC127939 transmembrane protein 54 EMBV3_32000 AGATTTTGAAGAATTTAATTGTTGTGAAAGGCAACTGGAAGCAAGAGTTGCTGAAATTCA Variant GeneID:619125|LOC619125:XM_002694624:83_cdna 581^664 3 EMBV3_33754 GeneID:619125 17 GENE LOC619125 NULL similar to SEC14p-like protein TAP3 EMBV3_43268 GCATGGAGGTTCTTTCCTCCCCGGTTCGTTCCTGGTCACCAATCCCCCTGCGACTCTGAG Gene GeneID:505972|LOC505972:XM_002697868:393_cdna Constitutive 0 NULL GeneID:505972 25 GENE LOC505972 NULL similar to RIKEN cDNA 1520401A03 EMBV3_42212 CTAACTGCCTAGGGTCCTGTAGTGAACAAAGCTCCTCCCTCATGGAGCTACATTCAGCAT Gene BVT0102_339091 - 1 EMBV3_32784 GK000001.2:108454123-108582913 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15777 GTACAAGTGAGTGGAACAAACATGATAGAGAAGTTCTGGAGAAGGAAGGGCAAGGAAGGC Gene GeneID:539471|MORC4:NM_001102230:34_cdna Constitutive 0 NULL GeneID:539471 X GENE MORC4 MGC157250 MORC family CW-type zinc finger 4 EMBV3_40188 AGACTGAGCTCCCAGTGCAGGAGGTCTGGGTTTGATCCTTGGTCAGGGAAAGTGTTAGTT Gene BVV0102_263563 + 0 NULL GK000002.2:23390742-23442818 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15852 TCTGCCTCTGAGACGTTATTCCAGCAACGAGAGGTATTTGCTTATGCAGTCGACCAACAG Gene GeneID:516106|TSHZ1:XM_002697657:67_cdna UTR3_Alt 1 NULL GeneID:516106 24 GENE TSHZ1 NULL teashirt zinc finger homeobox 1 EMBV3_07647 TCCTTAGTTTCCATGTTTTTAAAAAATCATTCCCTTTTTTTAAAAAAGAAAAAAAGTAAT Gene GeneID:534707|CNOT6:NM_001101161:37_cdna Constitutive 0 NULL GeneID:534707 7 GENE CNOT6 NULL CCR4-NOT transcription complex, subunit 6 EMBV3_15290 ACCCCCAATTCTGGCCCTCTCATGCTCCGATATTTACTTCAGCATCATGGTACTAGCAGC Gene GeneID:782792|LOC782792:XM_002693707:395_cdna Constitutive 0 NULL GeneID:782792 15 GENE LOC782792 NULL similar to olfactory receptor Olfr987 EMBV3_30139 CCTCACTGCTGAGGGCTATTCAGTTATTGTGGGCAATACTCTTGGGCAGCAGGCAGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21128 AGGGTACCAGTCTCACGACGACAGCTCTGACAATTCCGAGTGCAGCTTCCCTTTCAAGTA Gene BVT0102_127171 + 0 NULL GK000012.2:36374314-36429689 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036870 TCONS_00036884 TCONS_00036877 TCONS_00036881 TCONS_00036868 TCONS_00036871 TCONS_00036876 TCONS_00036882 TCONS_00036883 TCONS_00036878 TCONS_00036869 TCONS_00036875 TCONS_00036880 TCONS_00036879 TCONS_00036873 TCONS_00036874 1 XLOC_021252 Coding TCONS_00036883 XLOC_021252 Coding Coding ZMYM2 12:36385693-36513523 j TSS26748 10372 1 TCONS_00036883_8 1375 0.0171615888931739 26 0.919063749227484 2.83736242478932e-07 0.00365350010328 0.00302882824680265 0.00199259533870914 0.00348851710998481 0.000324126903483674 0.0016595419813727 0.000631941058351449 0.00269358758013813 3.9276249341306e-12 1.84765836154857e-09 9.36867605752221e-12 2.41096246559649e-08 2.22428611627394e-10 0.000328139934923107 2.73503734803575e-05 7.17722096988273e-11 0.000260602365620015 0.000130462967118221 0.000594476777308311 0.000902000062125917 0.000134108092843742 0.000428538556281087 0.00189715146323112 0.00246179786120109 7.29673435296437e-07 0.0012379339211398 4.76873027356006e-08 0.000321741520517651 8.74974063782059e-07 NM_001101907.2 ZMYM2 Bos taurus zinc finger, MYM-type 2 (ZMYM2), mRNA. 0.0 2235 100.00 0.119359814886232 NM_197968.2 ZMYM2 Homo sapiens zinc finger, MYM-type 2 (ZMYM2), transcript variant 2, 0.0 7272 81.86 0.717605090628616 TCONS_00036883_8 sp|Q9UBW7|ZMYM2_HUMAN ZMYM2_HUMAN Zinc finger MYM-type protein 2; 0.0 2623 94.19 0.999272727272727 2 coding 0 0 0 0 0.0493408771848473 0.739193513063709 -0.0579643153028971 0.462129848764844 AGAGGTTCGTTCCGTGGAGCCGCAGCCAGAACCGGGACCAGGACTTGAATTCATCCTTACCTAGTGCATCTTTGGCTGAGCGTGAGGAGGACAACACCCCGATTGGTCTTTGGCATGGACACAGGTTCAGCAGGAGGATTGGAAGTGACTGATCAGACTCCTGTTCTGTTGGGGAGGACAGCCATGGCAGCTAGTCTCACGGATGTAGGAAATTCATTTAGTGGGCCACCTAATCCTTTAGTGAATAGATCTAATAAATTTCAGAGTTCATCAGTGGAAGACGATGATGATGTTGTGTTTATTGAACCAGTACAACCACCTCCTCCTTGTGCACCAGTGGTGGCTGATCAAAGAACCATAACATTTACATCATCGAAAAATGAAGAGCTGCCAGGAAATGATTCCAAAATTCTTCCTTCCTCAAAAGAATTGGCTTCTCAGAAGGGGAGTGTAAGTGAGACGATTGTCATTGATGATGAGGAGGATATGGAAACAAATCAAGGGCAAGAGAAAAATTCCTCCAGTTTTATTGAACGGAGACCATCTGAGTCTAAAAACAGAACCAATGATGTGGATTTCTCCCCTTCCAGTTTTTCAAGAAGTAAGGTAAATGCAGGAATGGGTAATAGTGGTATCACCACAGAACCAGACTCTGAGATTCAGATCGCTAACGTTACGACCTTAGAAACAGGCGTCGGCTCTGTGAGTGATGGCCAGTTAGAACACACTGACGGGAGAGACATGAACCTGATGATCACACACGTAACATCCCTGCAGAATGCCAGCTTGGGAGATGTCTCTAATGGACTGCAGTCAAGTAATTTTGGTGTTAATATGCAAACATACACCCCGTCTTTAACTTCACAGACCAAGACTGCAGTAGGACCTTTCAATCCTGGTAGAATGAATGTGGCAGGAGACGCATTTCAGAACGGGGAGTCTGCAGCTCATCACAACCCTGATTCTTGGATCTCCCAGTCAGCATCCTTTCCCCGTAATCAGAAACAGCCAGGGGTGGATTCTTTATCACCAGTGGCCTCGCTTCCTAAACAGATTTTCCAGCCTTCTGCCCAACAGCAACCCACTAAACCAGTTAAAGTCACTTGTGCAAACTGCAAAAAACCTCTGCAGAAGGGACAGACAGCTTATCAGCGAAAAGGATCAGCTCACCTCTTCTGTTCTACCACCTGCCTTTCTTCCTTCTCTCACAAGCCTGCTCCAAAGAAACTTTGTGTTATGTGTAAAAAAGATATAACTACAATGAAAGGAACCATTGTTGCTCAAGTGGACTCAAGTGAATCCTTCCAGGAGTTCTGTAGCACATCTTGTCTGTCTCTCTATGAAGACAAACAGAATCCTACTAAAGGAGCTCTGAATAAATCAAGATGTACAATTTGTGGTAAACTAACAGAGATTCGCCATGAAGTTAGCTTTAAAAACATGACTCATAAGCTGTGCAGTGACCATTGCTTTAACAGATACAGGATGGCTAATGGCCTTATAATGAACTGCTGTGAGCAGTGCGGCGAGTACCTACCCAGCAAAGGAGCTGGGAACAATGTCCTGGTTGTTGATGGTCAGCAGAAGAGGTTTTGCTGCCAGAGTTGTGTCAGTGAATACAAGCAGGTAGGTAGCCATCCAGGCTTCCTGAAGGAGGTTCGAGATCACACACCAGACTCTTTCCTCACGCAGCCTGAGAAATATGGAAAACTGACCACTTGTACTGGTTGCCGAACACAGTGCAGGTTTTTTGATATGACTCAGTGTATAGGTCCTAATGGGTATATGGAGCCATATTGTTCAACTGCTTGCATGAACAGTCACAAGACAAAATATGCAAAATCACAAAGTTTGGGAATTATTTGCCATTTTTGTAAGCGGAACTCTTTACCTCAGTATCAAGCCACAATGCCTGATGGAAAGTTGTATAACTTTTGCAATTCCAGTTGTGTGGCTAAATTCCAGGCTCTCAGCATGCAGTCGTCTCCCAACGGCCAGTTTGTAGCGCCAAGTGATATTCAATTGAAGTGCAACTATTGCAAAAACTCTTTCTGTTCAAAGCCAGAAATCTTGGAATGGGAGAACAAAGTTCATCAATTCTGCAGCAAAACTTGTTCAGATGACTATAAGAAGCTGCATTGCATAGTTACATATTGCGAATACTGTCAAGAGGAGAAGACTCTTCATGAAACAGTAAATTTCTCTGGCGTTAAGAGACCTTTCTGTAGTGAAGGCTGCAAACTGTTGTACAAACAGGACTTTGCAAGGCGTTTAGGACTGAGGTGCGTGACTTGCAATTACTGCTCTCAGCTGTGTAAGAAGGGGGCAACAAGGGAGCTGGATGGTGTGGTGAGGGACTTCTGCAGCGAGGAGTGCTGCCGCCGCTTCCAGGACTGGTACTACAAGGCTGCCAGGTGTGACTGCTGTAAGTCTCAAGGAGCCCTTCGGGAGAGGGTGCAGTGGCGTGGCGAGATGAAGCATTTCTGTGACCAGCACTGCCTGTTACGCTTCTACTGCCAGCAGAGCGAGCCCAACATGACGACCCAGAGGGGACCTGAGAACTTACACTACGATCAGGGTTGTCAGACGTCCCGAACCAAAATGACAGGTTCAGCACCACCCCCTTCTCCAACCCCCAACAAGGAGATGAAGAACAAGGCAGTTCTGTGCAAACCTTTGACTATGACCAAGGCGACCTACTGCAAACCCCACATGCAGAGCAAGTCCTGTCAGACAGATGGCGACTGGAGGACGGAGTACGTGCCTGTGCCCATCCCTGTGCCTGTGTACATCCCAGTGCCCATGCACATGTACAGCCAGAGCATCCCCGTGCCCACCACCGTGCCTGTGCCCGTGCCAGTCCCTGTGTTTCTCCCTGCCCCCCTGGACAGTGGTGAGAAGACTGCTGTGCCCGAAGAGCTGAAAAGCACAGGTTCTTCAGATGCCCTGGGCACAGAGCTGCTGACCATGACGGACATGACTGAGGACGAGGGGAAGGCGGAAGGCGCCGACCTCCACAATGTCATTATTGAAACGGACATAATTGGTTCTGACCTCTTGAAGAGTGCTGAGCCGGAGACCCAGTCCAGCATGCCCGATGTGCCATATGAGCCAGACTTGGATATTGAAATAGACTTTCCCAGAGCTGCTGAGGAGCTTGACATGGAAAATGAGTTTTTATTACCACCTGTTTTTGGAGAAGAATATGAGGAACAGCCTAGACCTCGATCTAAAAAAAAGGGCACCAAGAGGAAGGCGGTGTCAGGGTACCAGTCTCACGACGACAGCTCTGACAATTCCGAGTGCAGCTTCCCTTTCAAGTACGCGTATGGGGTCAATGCTTGGAGACACTGGGTCCGGACGAGGCGGTTCGAGGAAGACCTTCTGGTGTTAGATGGGCTGACACCTCCTAAGTCAGTGAAGTTGAAAGAGGATCTGCTCTCTCACACCACGGCTGAGCTGGACTACGGCCTGGCCCACTTTGTCAATGAGATCCGAAGGCCCAATGGGGAGAGCTACGCACCCGATAGCATCTACTATCTCTGCCTTGGAATTCAGGAGTACTTGTGTGGTAGTAATCGAAAAGACAACATATTTATTGATCCAGGATACCAGACATTTGAGCAAGAATTGAATAAGATACTCCGAAGTTGGCAACCAAGCATACTTCCAGATGGGTCAATATTTTCTCGAGTTGAAGAAGATTATCTGTGGAGGATAAAACAGCTAGGATCACACTCTCCAGTAGCTCTTCTGAACACCCTGTTCTACTTTAACACTAAGTATTTTGGCCTGAAAACAGTGGAACAGCACTTACGGCTTTCCTTTGGCACTGTGTTTAGGCACTGGAAAAAAAACCCTTTAACCATGGAAAATAAAGCCTGTCTTCGGTACCAAGTGTCTTCCTTGTGCGGAACAGATAGTGAAGATAAAATTACTACTGGAAAAAGAAAACATGAAGATGATGAGCCAGTATTTGAACAAATTGAAAATACAGCCAATCCTTCTAGATGTCCTGTGAAAATGTTTGAATGCTACTTGTCTAAGAGTCCACAGAATCTTAATCAGAGAATGGATGTTTTTTATTTGCAACCAGAATGCTCTAGCTCTGCAGACAGCCCTGTCTGGTACACGTCCGCCTCACTGGACCGAAACACCTTGGAAAACATGCTCGTACGGGTTCTTTTAGTAAAAGATATTTATGATAAAGACAATTACGAACTGGATGAAGACACAGACTAAAAAAAGGAAGGATTCAGAAGCAGTCAGGATAACAGCGTTAGGCAGTCATGCTGCTAGATCTTCATTATGGAAACATTTCAGGTTTACTCCTCCTGTTCTGGGTTTTGTAGCAGTGCACCCACACCGGGTACTACCATGTAAATAATCTGTGAGTGAAGTTGCCATTATTCTATGTAGTGGTTTTAGGATACTTACAAATACATTCAAATTCTTTTTTTTTTATTATTATTTATTTGATTAGGTATGTTTGTAACTTTTTACATTACAAAATATGAATGAGAATGTGCCATGTATAATTTTTTCTTGTAGTAAGAAACATCCATATTGCACCACTCTGCTGTTGCAAAGCTTCCTGGAAAGGGGGCTCTTCTGCTGGGTTTCTGACCGAATGGTTGTGTGTGGGGAGCACCTACTAAAAGTTTAGAACTTGCAGTGTCTTTCAGAATTTTTAAAATAAACTGTAAACTAATGGGCTGGGGTTTTTGTTTTGTTTTTCTGGGGGTTTTGTTTGTTTGATTTATGCTTTAGTTCCTAAAGCCTTACAAGCTTATGTAGAGAGATACCATCTTTTGTACCAAAAACAGATGAGGGAATGCTGTTGATCCTGGTGTGGATGCTGGTGAACTGTTATGTGAGTCCATACTGCAGGCCGACCTCTCTGTTCCCTGTATTAAAACCTTGGTGTCCTTTCCTCACTGGTGGCTTTCTGTAGCATCCCAAGCAATAATAATTATATATATATATATATATACACACACACACACATATATACATATACACACTTGTATATATATGTGTGTGGGTGTATGTGTGTACATTCATGTACACACATACACACATATAAAAGATGATGTTAATATGTCCTAGAGACATTTTCTTTGTAAAAACATCTGATGAAAATATAAAATTCTGTTTTTTATGTCAACCCTAAGCACCCCTTCACTATATAGGCATTGGTTTTCCTCTGCCCTTGAGGACACAGATCACGTTTGGGTCCCTGGATAGGACTCTGTAGCTTTAAAACTTTATGAAGATTCTTGTACCTGCCCTCATGCTAGGTAAAATTATGTTCAGAAATGCCACTCCTGAGACCGTCGTCATGGAAGAGAGTGAGTTGAAATAAGATAGGAGCCGTTTCACTCTGAGGATTAACAGTACAATGACTCTGCCAGTTCAGGTGATTGGAGGGCAGAGAAGGAGACTGGATCAAGTGTATCTCGAAGGAAATCACGTTCCATGTTAGACTGTTTGGCTTTTACATTTTAATTACTTCTTATAGAAGATTGCATTAAAAAACTTTATACTGCCGCATGTTGATTTATCCATTCAGACCTTTTCTTTTAGAACAAGGAAGTTTATATAAAATCGTACTGTCTATACTGAGGAAGTGCCAACTGTGATTATCTTGAAGAAATCCTTTGGCTGACTTCATAGAGCTTGAGTGTGATCACATGGTCTTGTTTCCAGTTCCTGAGTCACTTCAGTGATGTTCATTATTAAAACTGTTTGGGGGAAATTGGGCTACTTTCCACAGTGGTTAAGCAGTGTCTACACATCCCTTAAACATTTCTCTCTTCCTTGGGATAAATGTTAGCATTCAGAAAAAAGTCTCCTCAGTCATGATTTGGGAAATTTCACGAGTGTATTCAGCTGTATATTTAAGCAATAATTAACAAATATTTTTGACGTAGAAATTACTCTGTAAGGTTCTAACTTGTTTTATAAAGTTTGAATAACATTTCTGTCCCTTAACTGGTTTTATATTTGTGGATTTGATAGATTGACAGCAAATCTGATATTACTTAAAAAGATATAGATTGCTCATTGTTTAATGAAGTAGGTAACATTTACAATAACAAAAATTTTCTCATCCTCACCTTTTTAAGAACTACAGCTTTAAGCACTTTTCCTATAAACACATGTTGATTAAAGGTGATTAATCCTAACCATCTTTTGTTCTTTGAGGTGGTGCAGTATTCCACCCAGAGCAATAACGTTTTCCCTAAATGTCACCTCATGTGTGTTTTACCAAACGCCATACATCCTGCTGTGGCCCCACTATTCATAGCACCTTGTCTTGCTATTTTTTTTCTCTTTATTGTGAAAAAGGCTTCCCCCTTTTCTCAACAGAAATGTCCGCATAGTTCTGATGTGGATACGATTGAGGATTTAGAACTTCTGTCTTTGTCTTGACTGCAGTCCAAGGACTGGTTAACGTGACTCTCAGGAGCAAAAGAATAAAATAATCCTATTTTGTGAGGACTGTTTGTTCTGTGAAACCACTTCATCTGGAGCACATTTTGTTGCTTCCTGGACCTCCTTGGTATGTGGTCCTACATGACCGTGAGAAAGGGGCAATGAAATGATAGTTCATTTTGCTCCTCAGTGGTTCTGATGACAGTGCCCTAAAACTATAACGTGGTTGCCTTCAGATTGCTGTTGGAGATGCTCTGTTTTTCTGTTCTAAAGAAGATTTTGCCATTTAAAATGAATTAATGAAAAAAAATTTTATTCATATTGAGAAAAGTGAATTTCCCATGCAAAATTGAATCTTCATTAACGCTTTTCTTTTTATTTAGACTTCTAACTGTATTGGGTAATGTAAGATATTAAAGGACTTTGCTAGGTAAGAAACTCAACTCTTCTTTTGGCCATAAACAGTACATTATTTTAAATAGTACCTAATGTTTCTCTGCTGTGTGGAGCTTTTACCAGCGGATTACACACACTGAGACAGGGAGAGGAGGCTGTGAATTGTGTTGTGCGTCACACATCTGTTACTGCCTCCTAATGGGGTCTCGTTCTGTCCTGGGCGACTGTGGCTTGTGGTTAGGTGGTTGTATGTGCACCATGTTAAGGGTCACAGTGATGCAGACGTGATAACATTGTACAGTTTTGGTTTGTACTACTCTTAATACCGGTCCATTTAACCTGAGATCTTAAATGTCTTGCAGTCTTAAATACATTTCCAGAATGTACTATTACACACATATCACTTATGTTCCCACGTAAACACTGCCTGCACGGTCATCTTGTTTCCCTCAAGCAATATGGTCATGAAAGTGCGTGTGAAAATGTTTTTTAGAGAGTAAATTTCTTTAATTAAATTATAATACAGTTGGATTTTCCCCCTCAATAAGCCCCATACTCATTTTTAGAGCAGTTCTTTGGATTTCAGTTATTCCATTCTGCTATGTTCTTAGAAATAGACAGTTGTTAATGGTTTTTTCCCCCAATATTAAGTACTTTTTTTTTTTTTTACCATTCCTGAGAATAACATATTTGAAAATGATACCACTATAACAAAATCTTACAGATTAGAATTTGATGTCCAGAACAGGTTAACTGTGTCAGTCTGAGTAGAAACACTTAAAATGGTGTCTCAGTTTGTACTTCCCCCCACCTCGTTACTTAGAAGCTAGATCTTAGAGAGGTACTGCAAGTAAATTGCTGTTACTACCTGAAAATGATACTGGACAAGAGAAAGTTCTTAATATCTGGACACATAATGTCCTAATTCATTACTGAGTTAAACAGTCCATGAATTTAGGCCTTTTGAGAAGAAAAGAACGAAAGAGAAACCAAGATTTAATCTGTGAATAAAGTGTATATTAGGAATAGAACCAGAGGGGCCCACAGACCCTGTGGGTATACCATTGGAGGTCCCTGTTTTTGTTGAATGAAGCAGATGTAGATCCTGCCGGGGTCCAGAGGAAGAGCAGTCGGCTCCGGGAATAAATAAAGGACCAGGTCCTTTATTCTGTCTGGGTCTCAGTTTATTTGTAAAATGACGGCTTTGCCTTGGATTTTTGATTGTGGAATTTCAAATTAAGTATGGTTAATATTATACTTAAGAGACTTTGTATTAAATTTTTGCAGATTTATGTTTGCATCCATATGATTTATTTAGCAACATGTTTTTTTGGAGAGTGGAGTGATCTCTCCTAAAATAGCCTGAACATAAAGGGCATTAGACCTAGTTTTGTGAATCCTGTTACTGTTAGATAATCCCATGGAAATTCATTATCACAAAACCTAAACCACAGATCTTCATTTCATATTTTCTCTGTGCCAGAGAGCTACTGCGAACTATGGTAGTTAGGAAGAGAAAGTAAAAGATGAAGTTAGGGTTCCAAAGGTTACAATTATGAGGGTGAACAAGATATACTTGTAAGGATATTGAATTCCTGAGGAGCACTAGGGAACGTATCCATGATAGTTTAAAGCAGAGATGGTGGATACTTGGAAATCGTCTGATAGTCTGTTAAGATCTAGTGTAGTCTTCATAGACGTCATAGACTTCAGCCACCACCTGTAGTTTATTTAGATTCCTGTAATCTTGACATTGCTCATGACTCTGTAGCAAGTGGTCAGGAGCCGTTACAGGTTAGTTTAATGGTTCCATTTTGGTGGCATCCCTGCTCACCTGTGGGTTCCAGACCAACTTGTAACAGTGCTTAGAGGGGCAGCTAGCGCTGGTGAGTCAGAGGCGATACCAAACCATGGAACCACATGCAACTAAGGTAACCGCTTCTAGGTTGTGTGATGTGCATGGAACACATAAGATCCAGTATATTGCGTCAACCACTGAGCATTTATTTCATAGCAGTTGGTCACCAGTGTGCTGTTCATAGCCCTGTGTGCGAGATTCAAGTTTTCCATTTTGATTATGTCTGTGCTTCTAAGCTGCTGTCAGCAGGTGGCAGTAGTGTGCAGCCCCAGGCTTCAGTTGCTCTTTTTTGTTTATACAACTGTAAATATACTGTACCTCTTTATCGGAAATTCTTGGGGATTTAGGATCCAGAATTTTCTTTAAAAAAATGTGCCATGGGACTTCCCAGGAAGTCCAGTGGTTAGGACTCAACACTTCCAATGCAGAGGGCACAGGTTTGATTGCTGCTCAGGGGACAAAGATCGTGCATGCAGGGCCGAAAGTACAAAAGACTTTTGGGGTCTCAGAGTTGCTGATGAGGGATTGCAGGTCTGTAATAAAAGTAATGGCAGATCTACTGTTTTCATTCAATGAAACACCTAGTATTTTTTTTCTCTTGTGTTGCTCAGTTGGATAGAGGTAATGGAAAGCTTTCTGTAAAATTTGCCTATTGAAAATGGCAGGGAACAGGCATAAATACAGTGGGAGTTGTAGAACCATCATTGAATTCTGAAGCTTAAGAACAACTGCTTTTATTTTCCTTTTTCCTCAGAAATTGTAGCATGACTGTTCTGCTCAAAAGCCTTTTTTGAGTGGCTCATGTTATGTCCCAGAGCTGTTTATTCATCCAGCACACACACTCAAGTGACTATTATTCTCTCAGGTGCCCTAAGCAAGGTGCTGGGAACACAGTACCTCTCCTCAAAAGATGTCTACCTGGGGAGAAGGGAAAGTGTGATGGAATACCAGAATAAGATGGAGCCGTGGGCCTTACTGAACACGACCACCTGTATTAAACAATAAAATTTAATAGGTCAAGTAATTTATACAGACTGCTCTTAGCCCAGCTTTCTGACCCTGACTGTAGGCCAGGCCAGGTCTCTACTGTGCTATTGGCTTCCCAGCTGCCAGCCGTGGTTGTGGCCCCCCAGGTTCCCGAGGGAGCCGCGGGGCAGGGGCAGGTGTCTCACCAGAGATAAGGTCACAGGCAGAGGTGAGTGTGCATCCCGGCTCCACCCCCAGCACCTAGAAAAACCCTGCACAGGGAAGGTGTTCATAAACATTTGTTGAGTGAATTATTGATTGTAAGCACTTTTAAAGTCAAGCACCTAGAATGTGACCTGTGGGAAGGATGACCCACCATCCATGAAATAGCACCTGCTTTGGGTAAGTAGCACCTGCTTTGGGTTCACCTCTGAACGCTGGTCTGCATCTCCAGGAGTCAGTCTGATTGGCCCTGTGTTCATTCTCTGGAGCTGCTGGTTGCCCGTGACCATCCGTCTATGAGGGCTGAGGGAGTTGAGATGTAGGTCTTGGTGGTTCATAGTTATGTTCAAAATAGAAATACTTAGACGTCACTAGTGAAGCGTAAAAGGCAGATTTCTGATCTGTCTCCAGGAGGTTGATTTAGTAGATTCAGAGTGGGTCCCAGAGAGCTGCATTTTTTACACCTGGGTTCAAAACCCAAGACCTACAGTC EMBV3_32302 CCATCGACGGCTTAGAAGATCTGGTACATGGACAACTGTTTGGACCGATGGACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_03454 GTGCTAGCTGTACTGTTTCCCTTTGTGCAAACATCAACTCCTGCCAGAGGTCTTCTCCTG Gene BVT0102_092820 + 1 EMBV3_43076 GK000002.2:19259997-19297436 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02137 TCCCCAGGGAGCTTGGAGGCCAAACAGCCCATGTTGGGATCTCAGGGTGAAGGCAATAAT Gene GeneID:513556|TP53I13:XM_002695675:195_cdna Constitutive 0 NULL GeneID:513556 19 GENE TP53I13 NULL tumor protein p53 inducible protein 13 EMBV3_18264 CAGGACTCATGTAGCATTAATCAACTGTGAATTGCTGTGGGGTAAGGGGGTATCCCTGAG Gene BVT0102_034896 + 0 NULL GK000019.2:45539061-45540235 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097308 TCONS_00097305 TCONS_00097306 TCONS_00097307 1 XLOC_058218 Coding TCONS_00097305 XLOC_058218 Coding Coding MAP3K14 19:45539555-45583045 j TSS72130 4327 1 TCONS_00097305_7 953 16 0.900871484743268 0.00027249029177107 4.7088126841869e-09 0.00105253426276782 0.000272390230193047 0.000314638798525883 1.68842406163759e-10 0.000477799458026997 0.000437394474105321 5.51883191386812e-07 0.000653243534720735 2.15985434842233e-05 2.21792762869991e-13 0.00091441871146511 0.000689006673550617 9.03375602573819e-05 0.000591974035487196 0.00149248917452984 1.40419838119607e-09 0.000492273001304083 0.00160076082139627 0.00112111259304544 3.22424515356703e-09 0.000137776433036768 0.000151036900545547 4.59875151725898e-05 0.000109956970745531 5.2178071366817e-05 0.000167817461820569 7.29062968675813e-05 1.72443612758725e-05 XM_005220830.1 MAP3K14 PREDICTED: Bos taurus mitogen-activated protein kinase kinase kinase 14 (MAP3K14), transcript variant X1, mRNA. 0.0 7793 100.00 0.998382250982205 NM_003954.3 MAP3K14 Homo sapiens mitogen-activated protein kinase kinase kinase 14 (MAP3K14), mRNA. 0.0 4125 80.96 0.999306678992373 TCONS_00097305_7 sp|Q99558|M3K14_HUMAN M3K14_HUMAN Mitogen-activated protein kinase kinase kinase 14; 0.0 1624 88.18 0.998950682056663 2 coding 0 0 0 0 0.0391546818151151 0.704213330657667 0.00837747638531744 0.871023031558237 GGGGTGAGCGTGAGCCTGGGAGATGGCAGTGATGGAAATGGCCTGCCCAGGCGCCCCCGGCTCCACGGTCGGGCAGCAGAAGGAGTTCGCCAAAGCCAAGGAGAAGACACAGGCGATGGGGAAGAAGCAGAGCTCCGTCCACAAGCTGGAGGCCGTGGAGAAGAGCCCCGTGTTCTGCGGGAAGTGGGAGATCCTGAACGACGTGATCACCAAAGGCACAGCCAAGGACGGCTCAGAGGCTGGGCCAGCTGCCATCTCCATCATCGCCCAGGCCGAATGTGAGAACAGCCAAGAGTTCAGCCCCACCTTTTCAGAACGGATCTTCATCGCTGGTTCGAAACAGTACAGCCAGTCCGAGAGTCTTGATCAGATCCCCAACAATGTGGCCCACTCGACTGAGGGCAAAATGGCCCGTGTGTGCTGGAAGGGGAAGCGCCGCAGCAAAGCCCGGAAGAAACGCAAGAAGAAGAGCTCCAAGTCCCCGGCTCAGGCGGGGGTGGCCTTGGCCAAACCCCTCCCCAGGACCCCCGAGCAGGAGAGCTGCACGGTCCCAGTGCAGGAAGATGAGCCTCCACTGGGTCCCCCATATGTTAGAAATGCCCCGCAGTTCACCAAGCCTCTGAAGGAGCCGGGCCTTGGTCAGCTCTGGTTTAAGAAGCTTGGGGAGGGCCTGCGGCCAACGCTGCCTCGACCAGAACTCCACAAACTGATCAGCCCCCTGCAGTGTCTGAACCACGTGTGGAAAGTCCACCACCCACAGGACGCCAGCCCCCTGCCCCAGCCCTTCCCCTACAGCAGGCTGCCTCACCCCTTCCCATTCCACCCTCTCCAGCCCTGGAAGCCTCACCCGCTAGAGTCCTTCTTCCTTGGCAAACTGACAAACTGTGTAGACGACCAGCAGCCCCTGCCTGGCCCTCACCTGGGCAGACTGGCCTGTGCAGATAGCCAGAAGCCCCTGCCCAGCCCTCACCTGAAGCCCAGCTTCCCGTCTCGTGGCTCAAGGGACAAGCTGTCCGTGGAGGAGTACCTGGTACATGCCTTGCAAGGCAGCGTGAGCTCCGGCCAGGCCCACAGCCTGGCCAGCCTGGCCAAGACCTGGTCAGTGGGGGGCTCCAGGCCCCAGGCGCCCAGCCCCGAAACTGAGGACAGCGAGGGGGTCCTACTCATCGAGAAACTCAAGCCGGTGGATTATGAGTACCGAGAGGAGGTCCACTGGGCCACGCGCCAGCCCTGCCTGGGCAGAGGCTCCTTTGGAGAGGTCCACAGGATGGAGGACAAGCAGACCGGCTTCCAGTGTGCCGTCAAAAAGGTGCGAGTTGAAGTATTTCGGGCAGAGGAGTTGATGGCATGTGCGGGATTGACCTCCCCCAGAATCGTCCCTTTGTATGGAGCTGTGAAGGAAGGGCCTTGGGTCAACATCTTCATGGAACTGCTGGAAGGTGGTTCGCTAGGCCAGCTCATAAAGCAGAAAGGCTGTCTGCCAGAGGACCGGGCCCTTTACTACCTGGGCCAGGCGCTGGAAGGGCTGGAATACCTCCATACCCGCAGGATTCTACATGGAGATGTGAAAGCCGACAACGTGCTCCTGTCCAGCGATGGGAGCCGCGCAGCCCTCTGCGACTTTGGCCACGCTGTGTGCCTTCAGCCCAACGGCCTGGGGAAGTCTTTGCTCACAGGGGACTACATCCCCGGGACAGAGACCCACATGGCGCCAGAGGTGGTGATGGGCAAGCCCTGCGATGCCAAGGTGGACGTCTGGAGCAGCTGTTGTATGATGCTGCACATGCTCAACGGCTGCCACCCCTGGACCCAGTACTTCCGAGGACCGCTCTGCCTCAAGATTGCCAGTGAGCCTCCACCTGTGAGGGAGATCCCGCCCTCCTGTGCCCCGCTCACGGCCCAGGCCATCCAGGAGGGGCTCAGGAAAGAGCCGGTCCACCGAGCATCTGCAGTGGAGCTGGGGGGGAAGGTCAGCCTGGCACTGCAGCACGTGGGAGGTCTGAGGAGTCCCTGGAGAGGAGAGTACAAAGAACCAAGACATCCACTGCCACTCCAAGACCACCCACCACCAAGCCAAGGCCACCGTCAGCGGACCCTGCATGCCCCGCCAGGGGAGCTCTCACCAGGGGCCCCAGGGCTGCAGCCAGCTAAGGACGCAGCAGGCGGGGCCCCTAAGCTCCAGCCTCCTCCACCTCCAGACCCCCCAGAGCAGAGCAAGTCTCCCAGCCTGCACTGGGGCAAGGAGGAGTCTGGGACATGGGACCCACTGCCCCTGTCCTCCCTGGATCCTGCCCCCGCCAGGAACCCCACCTCACCCGAGCGAAAGGCAACCTTTCCTGAACAGGAGCTACAGCAGCTGGAGATAGAGTTATTTCTGAACAGCCTGTCCCAGCCGTTCTCCCTGGAGGAGCAGGAGCAGATCCTCTCGTGCCTCAGCGTCGACAGCCTCTCCCTGTCAGATGACAGTGAGAAGAACCCGTCCAAGGCTTCTCAGAGCTCGCGGGACACACTGAGTTCCGGCGTGCATTCGTGGAGCAGCCAGGCAGAGGCCCGCAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGCGGCCCACTGACACACCAAGCTATTTCAACGGTGTGAAAGTCCAAATACAGTCTCTCAATGGCGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAGGTGGGAGACATCGCAACAGGCATCAGCAGCCAGATCCCAGCTGCAGCCTTCAGCTTGGTGACCAAGGACGGGCAGCCCGTGCGCTACGACATGGAGGTGCCGGACTCAGGCATCGACCTGCAGTGCACCCTGGCCCCAGACGGCAGCTTCGCTTGGAGCTGGAGGGTCAAGCACGGCCAGCTGGAGAACAGGCCCTAAGCAGCCTTCCACCACTGGCTCCAGTCGGCCAGAAGTGGCCTTCCTTCTCGGTGCTCAGTGCTGCTCTGAGACACAGGCTCTGCCTGCTCCCGGAGCTCTGCCAGCCCGTGGCTCAGTGGTGGGACCAGGGGCTGGCAGCAGTAAGGTGGCGCCAGCAGGACACCTCCCAGGATCTTCCACCCGGGTCCTGCCTGAGCCCACCGGAGAGGAGGAGGAAGAAAGGAGGCCTCTTCCCACGAGGAACAAAGAGGGTCTTCTCTGCCTCGGTCCCGACAAGCTGGCCTGACCCAGTTAGGATCAGTGACCACCTGCTGGCAGTCAGGGGAGAGCGGCTTCCGGCCCAGGTCAGGAGAGGTGGGTGAGCTGTCCCTCAGTTTCCAGGCAGGTGTGAGCGTCTAACGACCCCCGAACCAGGCCCAGGCCAGGACTGGGGCGGCAGGTGTGCCTCCCCTCGCGTTCATGGAGGGGCCCCTCTGACCCCCTTGTCCAGCTTTGCCTGGCCATCAACCCCTCTTCTAGCACTAGGAGCTTTTCAGGCCAGGGAGGGAGAGACGCCTGACATGGGGGTCTCCCTGGGAGAGAATGCCACTTCTCAGGGTGCCACAACTCAGGCCCTGAGCTGAGGTCAGCTTCAGAAGAACCAGAGAAGGCATTCAAGTGACACGGTTCTCAGCCCCCAAGCACGTGCCCCTTTGCCACCAGCCACCAGTCTGCCCCAGAGCAGCAGGCCCTGAGCCCAGCCGCAGGCCCAGCACTGCCCCTGCCCAGCTGGCACTCAGCTCGCTCAGCTGTGGAAGTGGAGGGTGACATGAGACCTACCTGACAGGAACGCTCTGAGGACAGAGCACGATCGACTCCGCAGAAAGCACCCGACGCAGGCGCTCCTGTTACCCAGGCCCCGGCCCTCCACACCCTCACACAAGCCTCCCGGGACACTCACTCACCCTGCCAGCCCTGGTCTCCAGGGCACCGCCTGCTGCACTTTGCACTCTGATGACCTCAAAGCACTTTCATGGCTGCCCTCCAGGAGGGCAGGCCAGCGGTTCTGCATGGGCACAAGCAAGCCAGGAGATGGGGGGAAGGGACTGAGCTCTTGACCCTTCTTCATGCATGTGACCCCTCAAACGTCCTCCAGATTTCCTTAAGATGTGCCCCCCGAGGCCAGCCTCTTCTTTTGGGGGGCAGCTGATCAGGACTCATGTAGCATTAATCAACTGTGAATTGCTGTGGGGTAAGGGGGTATCCCTGAGATCCCATCTGGGGAGAAGCTCATCCCCACGTTTTGCCAGGTGACCTTTGCCCAGCTATCCACAATCTAGCCATTACTCCTCCCCAAGGAGAGACTCCCGGCCCCAGGATGTGAAGAACTGCAGCCTTTGCACTGCAGAGTTGACATGGTAGAAAACTTTGCAAGCAATAAAGTTTGAGATAATGACAAGTGTG EMBV3_12174 ATCCCAGAAATTACACCTAAAGTGATTGATACCTGGAGACCTAAACTGACCAGCTCCCGG Gene GeneID:518458|SEMA6D:XM_002690938:268_cdna UTR3_Alt 2 NULL GeneID:518458 10 GENE SEMA6D NULL sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D EMBV3_41263 GCTCTTCCAGGATAACAACTGCCCTAAAGATTAGGAGTCATTTCCTTGTTATCACAGGTG Gene GeneID:520387|LOC520387:NM_001102503:34_cdna UTR3_Alt 2 NULL GeneID:520387 5 GENE LOC520387 MGC142988 KIAA0528-like EMBV3_02150 GAGGACCAGCTTCCTCTGGACTATGCCAAGGGCCACCTGAATACCTGCAGCTTCAACGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28016 TTAAGAGAAGTGGAGAGTCCTGTGGTTAGGGTGTAGGTGAAGCGGGCACTGGTGAAGCAA Gene BVT0101_003294 - 1 EMBV3_06666 GK000005.2:1628119-1907804 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190735 TCONS_00190737 1 XLOC_116731 NonCoding TCONS_00190735 XLOC_116731 NonCoding NonCoding - 5:1683096-1684425 - TSS143080 523 2 TCONS_00190735_2 54 0.72848948374761 2 0.607680722891566 0 0 0 0 0 0 0 0 0 9.69021445490195e-10 4.32489236865684e-10 0 0 0 0 1.61153827554251e-09 0.00514120516145956 6.51305544637966e-10 0 0 0 0 1.75411032546478e-05 0.00012219441567562 0 0 0 0 4.34340610067443e-10 1.26413590907355e-09 XR_229904.1 LOC101904089 PREDICTED: Bos taurus uncharacterized LOC101904089 (LOC101904089), 1e-16 91.5 71.19 0.336520076481836 0 noncoding CTGGTCTTCGCTTGCATGCAGCTGAGGATGAAGGGAAAAGCCACTCAAGATGGCTCTTCTCTTGCTGTCTGTACATGCCTTGCTTCACCAGTGCCCGCTTCACCTACACCCTAACCACAGGACTCTCCAATTCTCTTAATCACAGGGCTTAGTCAGTAACTGCCTGCATGCTTGCCCCTGGCCCTGGGCGCGGGTGTCCCTGGTCACTGATGAGCCTTCCTTTCCCCCTGAGAAGACTGTAGCTGAGCCCCGCCTGCAGTCTGCCGTACGCAGTGGGGTGTCACTCGGTGAATTTGCTCCTGACTTGTAAGATGCCCTGTCTAATAAACCATCCATGTCTCTGTCACAGTCTCTGGGCTCTGTTTTCAGTGTCACGTCTGAGCAAGTACAAATGCAGGCCTGTAGGGTGCAGCCTAACAGTGCTTGGTGGAAATTTCCTGTGAACTTATTTTATTCTAGTGACATTTATAAGACACTGATTCATTATGTCTCTTCATAGATTAAGAGAGGGTCCCTAACCCAC TCONS_00190733 TCONS_00190734 s 3' 54253 TCONS_00190733 TCONS_00190734 s 3' 54253 EMBV3_33986 CATAATCAGTGTTAAGCTCCAGCTCATCGGAATTGTCGGTATTGGAATCGCAGGTCTCAC Gene GeneID:539001|TSPAN2:NM_001034657:68_cdna Constitutive 1 NULL GeneID:539001 3 GENE TSPAN2 NULL tetraspanin 2 EMBV3_02400 TCCAAGTCCCCAGGTCATCACCGTAGTCACAGGCACAGGAGCCACTCAAAATCTCCTGAA Gene GeneID:507240|PRPF38A:NM_001075307:28_cdna UTR3_Alt 2 NULL GeneID:507240 3 GENE PRPF38A MGC140421 PRP38 pre-mRNA processing factor 38 (yeast) domain containing A EMBV3_39228 AGGCTGGTCCTACCTTGTGCCTTTGCTTCTGCCAGATTCTGGCCCCTCCACTCACATGCT Gene GeneID:525521|RPUSD1:NM_001075874:213_cdna Constitutive 1 NULL GeneID:525521 25 GENE RPUSD1 MGC139358 RNA pseudouridylate synthase domain containing 1 EMBV3_09779 GGTGAACCAGCCCTAAGGATCTTCCTTTAATTCCTCTGGAGTAATACTGTACCATACTGG Gene GeneID:540286|DAZAP2:NM_001034701:110_cdna Constitutive 1 NULL GeneID:540286 5 GENE DAZAP2 MGC127447 DAZ associated protein 2 EMBV3_38832 AAAAGCAAGGAGGGATCACATCTGAGCAAGCTGCTGTCATTTCCAAGTTCTGGAAGAGCC Gene GeneID:534683|COMMD1:NM_001046384:110_cdna Constitutive 0 NULL GeneID:534683 11 GENE COMMD1 MGC137453 copper metabolism (Murr1) domain containing 1 EMBV3_35658 AGGAACTGAAAAAGGGGCCTTTCACAGCTCCTAGTCACTGCTTCACATGATGGCTACATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16338 CAATCTGCCCTGGAAATAACATTGTTTTCCTTCGAGAAGCTCTGCGTACCTGCGATGTGG Gene BVT0102_166472 + 0 NULL GK000026.2:47539156-47635450 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42146 CTGGAAGATAAAAAGACTGACATAGGAGCGTTCTTACGGAGAGGATAGAAGTAGGTTCAG Gene BVT0102_242098 + 0 NULL GK000016.2:46464711-46468319 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36468 GAGAACTGTCTGGAGGTGAGTGGATAACTGGCTGCCCCATGTGTTCCTGGGTCATTTTCT Gene BVT0101_023578 + 0 NULL GK000010.2:83626269-83805467 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018125 1 XLOC_009189 NonCoding TCONS_00018125 XLOC_009189 NonCoding NonCoding - 10:83656421-83739723 - TSS12249 1201 3 TCONS_00018125_1 47 0.91007493755204 3 0.985618419946939 7.50526257816118e-31 1.92245098417727e-05 5.01644616798743e-05 0 9.16844190928372e-06 0.000172596571682176 0.00275116465720785 6.87362634402374e-06 3.28481172400103e-05 6.61443628083297e-06 0 1.16422320989818e-05 5.73467955385241e-06 3.34496965053395e-22 0 0 0 0 2.25725787868136e-05 0.000423180488484453 6.28142673651537e-06 0 0 0 0.0032722852960461 0.000160133024890907 6.19749820474775e-05 0 0 0 XM_005247079.1 ADCY5 PREDICTED: Homo sapiens adenylate cyclase 5 (ADCY5), transcript 9e-09 66.2 75.00 0.0915903413821815 0 noncoding 0 0 0 0 -0.671453499717759 0.0735683658470898 -0.00881362216029549 0.874029984098975 GGAAAAGACCAAAAGGTGGAGGAGGGGTGAGTTTGCTCTCTGCCTGAGCCCAGATATTTCTCTCTTCCTGCTTTTGGAGGTCAGTGCTCCTGGTTCTCAGGCCTTCAGACTTGGATTGATCTCCACCACTGGCTTCCCTTGTCTTCCAGATGGCAAGCTATGGGACTCCTTGCCTGCATAATCACGGCATTTGCTGTAGGAGGACCCAACTACCATACTGTGAGGACATGCCAGCAGGCTGTGGAGAGGTCTGCGTGAGGAGGAACGGAGGCCCTCTGCCAGTGATCACGTGAGACAGCCATTCTACAAGACAGTGCAAACGGGAAGCTTGCTGTAAATCCCCAACCTGGAGCCCATCTATCAAGCCCAGAGACCAAAGGAGATTCAACTCTGCCCTTCACAGCTTTGCCGCTTAGCTTTGTACCATCTCATAGTGTACAAATTCAAAGTTTAGTACATTTCCTCAGAGAGCGCCCAGCCGTCCTTGTGAGGTTCCTCTGGTCTTCAGTTGTATCACCCACCCCCCTCCAATTTCTCATTGCTCTCCAGCAGCAGACTTAGGGACAAGTCTTGACTCGCAGGCTCTAGTAGCTTCCAGAATTAATAAGTGACCCTGGGTTAAAAGGACCTATGGAGTGTCAGCATATTCCTCTCCCTATAGCTTTCATCTGTGGCTTTTTTGTTTTCCGTTCATTTCCACTTGGCCATTTTAGTTTCTTCAGGACCTCCAGACCATAGGATATTTCATTCTGTCTTTTAGAACATGTCACCTGACTTATTTATCACTCCCACTGCCTCAGATTCAGAAAAGCTTTCGGTAGCCGTGAGTTCGAGACTCCTAAAACCCCTGCTTTGAGCAGGGCAGCCCACAGGGCCACTGAGTTTCGTTGCTCCCTCCCTGGCATGGAGCTCAGCCCAGGATCAGAAAATGACCCAGGAACACATGGGGCAGCCAGTTATCCACTCACCTCCAGACAGTTCTCCCCTTTCTGCAATTTTAGTCCATTGATCCTTGTAGCTTCCTCAACTCTCTGATGCCATTAAAAGTATAACTTTTGTTGTTTATCCAGTTTTTTCTGCTCTTTGTCAGTAAGTGAGTTGGTGTACCATGACCTACTCTAGCCCACTCAGAAGCAGAACTCAGCTTTACAAGTCTGCTTGTGCCCTGGGCTAAACCACTGCTCACTCTGCCCCGCTCCCC TCONS_00015039 TCONS_00015040 TCONS_00015043 TCONS_00015045 TCONS_00015046 TCONS_00015047 TCONS_00015048 TCONS_00015049 TCONS_00015050 TCONS_00015051 TCONS_00015052 TCONS_00015055 TCONS_00015056 TCONS_00015058 TCONS_00015059 TCONS_00015060 TCONS_00015062 TCONS_00015063 TCONS_00015064 TCONS_00015065 TCONS_00015066 TCONS_00015067 TCONS_00015068 r 3' 30064 TCONS_00015039 TCONS_00015040 TCONS_00015043 TCONS_00015045 TCONS_00015046 TCONS_00015047 TCONS_00015048 TCONS_00015049 TCONS_00015050 TCONS_00015051 TCONS_00015052 TCONS_00015055 TCONS_00015056 TCONS_00015058 TCONS_00015059 TCONS_00015060 TCONS_00015062 TCONS_00015063 TCONS_00015064 TCONS_00015065 TCONS_00015066 TCONS_00015067 TCONS_00015068 r 3' 30950 EMBV3_25267 TGTGAACATGGACATGAAGATGGGGTCAAGCCTGAAGATCAAGGGCAAGATCACTGACGG Gene GeneID:511098|LGALS3:NM_001075494:46_cdna Constitutive 1 NULL GeneID:511098 5 GENE LGALS3 LGALS2 MGC151898 lectin, galactoside-binding, soluble, 3 EMBV3_15412 CATCTGAAAGTCTAGCCTCGGAGAAGCGCACAGCCGCGCTCAATAAATGCTCCCTTGTGA Gene BVV0102_070293 + 0 NULL GK000017.2:63589984-63611773 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077732 TCONS_00077727 TCONS_00077720 TCONS_00077731 TCONS_00077730 TCONS_00077721 TCONS_00077719 TCONS_00077723 TCONS_00077733 TCONS_00077722 TCONS_00077726 TCONS_00077725 1 XLOC_047131 Coding TCONS_00077731 XLOC_047131 Coding Coding SLC24A6 17:63561382-63591370 = TSS58009 3308 1 TCONS_00077731_3 584 0.0374848851269649 17 0.890252442725181 0.000864722494077465 0.000216634311621261 9.80859319592386e-23 3.99518383430587e-09 1.09092731110436e-59 7.01516300266045e-05 0.000122066795339551 1.26392987627847e-10 0.000118020603031808 0.000658312065240151 0.000418404001971027 2.93783175137116e-05 5.16177394571874e-51 3.90256492093716e-61 0.000421149397315779 0.00861321682045118 0.00182420889113854 0.00684857879759329 0.000711384719219962 2.06595780281142e-14 1.39020083954205e-93 0.00141592616639906 0.00253296040751189 0.00282106412660111 8.19800702204282e-138 0.00054250545175417 8.47670613443933e-35 0.000507802764786115 0.000586821916775741 0.000709484002300259 XM_005217775.1 SLC24A6 PREDICTED: Bos taurus solute carrier family 24 (sodium/potassium/calcium exchanger), member 6 (SLC24A6), 0.0 5952 99.88 0.999697702539299 XM_005253939.1 SLC8B1 PREDICTED: Homo sapiens solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 (SLC8B1), transcript 0.0 2185 82.11 0.65447400241838 TCONS_00077731_3 sp|Q6J4K2|NCKX6_HUMAN NCKX6_HUMAN Sodium/potassium/calcium exchanger 6, mitochondrial; 0.0 998 85.27 0.998287671232877 1 coding 1 1 1 1 -1.02514697201408 0.00340648745501381 0.00282806590492309 0.950309892562106 GGGAGAGAGAGTCCTAGGAGTCTGGGGCAGAAGGTCGGGCGGCGCGGGCTGGCGGGCGGAGGCTGGAAAGGCCGCGAAGCCCGGCGGGGTCGAGGTGCGGAGTTTGCGGGTCCGAGGCCCGGCCGGAGGTCTGCAGATCTTCCGAGCATCTGAAAGTCTAGCCTCGGAGAAGCGCACAGCCGCGCTCAATAAATGCTCCCTTGTGAGCGAGCACGCGAAATCGGCTGCCAATAGAGTGGAGACTCGTGTTGATCCTTAAGTTGGGAACACCTGAGGGCGTGAGCCCTTGTTAAATGAACCCTTATCGTTTGCTCTGACGCGCCCGCGTTTGTCTTCATTTTACGGATGAAGACTCAGAGGCTCAGAGACGTGGAGTGACCGCCCTAAGGCCGCATAGCGCCCCAGTGGCTAAGCCTGTATTGCAGACCTGGAGTGTCGGCTCCAAGTCAGTGCCAAGTGCGGTTACAGAGAACTGCGGAAGGGAAGAGCCTGTCAACAGGCCTCTGGAGGTGCCAGCTGTTTGGAACTGAAACACTTACGGAAGGGGAAGCATCGGGTGAGGGCCGGGCCCCTTGGGGGCTGATGGCCGGAGGACTGCTGAATGTATCCTGGGTCCTGAGTTTGCTCTGTGTGCTGCAAATGGTGGAGACAGTGTCCGGGGCCAGGGCCCCATCTGCAGGGGCCCACATTAGCTCCCAGTTTCCAGCCGCAGGTGTGAGCCAGACCAGCGTGGTAGACTGTCGAGAAGTGTGTGGCCTGAACGCCTCTGACCGCTGCGCCTTCGTCCGCACCAACCCCGACTGCCGCAGTGACGGGGGCTACCTGGACTACCTCGAGGGCATCTTCTGCCACTTCCCAGCCCGCCTCCTCCCTCTGGCCATCACCCTCTACGCTTTCTGGCTGCTTTATCTGTTTCTGATTCTGGGAGTCACCGCGGCGAAGTTCTTCTGCCCTAACCTGTCGGCCATTTCCACCACACTCAAGCTTTCCCACAACGTGGCAGGCGTCACCTTCCTGGCGTTTGGGAACGGGGCCCCGGATATCTTCAGCGCCCTGGTGGCCTTCTCAGACCCGCGCACAGCTGGCCTGGCCTTTGGGGCCCTGTTTGGCGCGGGCGTGCTGGTCACCACCGTGGTGGCCGGTGGGATCGCCATCCTGCGTCCCTTCACGGCGGCCTCCAGGCCCTTCCTCAGAGACATCATCTTCTACATGGCGGCCGTGCTGCTGATCTTCACCGCGCTCTACTGCGGCAGGGTCACGCTGGCGTGGGCCCTGGGTTACCTGGGCTTCTATGCGTTCTACGTGGTCACCGTGGTTCTCTGCACCTGGATCTACCAAAGGCAGCGGAGGAGATCCTTGGTCTGCTCCATGCCAGCCACCCCAGAGATACTGTCAGATTCCGAAGAGGAACGGATGTCTTCTAACACCAATAGCTATGACTATGGTGAGGAGTACCGGCCGCTGCTCCTGTACCCGGAGACCACGGCCCAGATCCTGGTGCAGGCCCTCAACCCCCTGGATTACAGGAAGTGGCGGACCAAGCCCATGTACTGGAGGGTCCTCAAGGTGTTCAAGCTGCCCGTGGAGTTCCTGCTGCTCCTCACCGTCCCCGTCATGGACCCCGACAAGGAGGACAGGAACTGGAAGCGGCCCCTCAACTGCCTGCACCTGGTCATCAGCCCCCTGTTCCTGACCCTGACCCTGCAGTCGGGGGCCTATGGCGTCTATGAGATAGGTGGCCTCTTTCCCGTCTGGGCCGCGGTGGTGATTGCGGGCACGGCCTTGGCTGCAGTGACCTTTTTTGCCACGTCCAACAGCGAGCCCCCCAGGTTTCACTGGCTCTTTGCTTTCCTGGGCTTCCTGACCAGCGCCCTGTGGATCAACGCGGCTGCCACAGAGGTGGTGAACATCCTGCGGTCCCTGGGCGTGGTATTCCGGCTGAGCAATACTGTCCTGGGGCTCACGCTGCTGGCCTGGGGGAACAGCATTGGAGATGTCTTCTCAGATTTCACGCTGGCCCGTCAGGGCTACCCAAGGATGGCGTTCTCGGCCTGCTTCGGTGGCATCATCTTCAATATGCTGGTGGGAGTGGGGCTGGGCTGCCTGCTCCAGATCTCCAGGAGCCACATGGAGGTGAAGCTGGAGCCGGACGGACTGTTGGTGTGGATCTTGGCGGGCACCCTGGGCCTCAGCCTCGTCTGTTCCCTGGTTTTGGTCCCACTGCAGTGCTTCCAGCTGAGCCGAGTTTACGGCTGCTGCCTGCTCCTCCTCTACCTGACCTTCCTCGTGGTGGCCCTGCTCACTGAATTTGGAGTGATTCACTTGAAAACTGTGTGAGTGACGCTGCGTCAGGGTCCGCCTGGCGGTCGGGAGGTGTCACTGCAGGCGGTGAGATGGAGGACGAAGTGCCTTCTGCAGAACCCGCGTGGCCCCAGCTGTGAATGGGGTGTGGGTTTGTGGGGGCCGTGCTATCTGCCAAAGATTCCAGGTCACTGCTGTGCGCAGTGAGGACAGTCAAATGTTGTTTCTGGGACTATGGTGATGGGGCTTCCCTGTGGACAGAGTCCCAGCAGCAGGCGGAAGACTTCCTTGCATTACCTCCAGAGCCTCTTTTGAAGGTCGGGGTCTGGGTCGAAGGGGGAAGCCTGGATGCCTTCCAGGCTGGTTCGGGAAGACCCCAAAGACTTCAGGGCTGGAGGCGGTTAGTCACCCCTTGCTGCCTTCTTGCAACGTTTCTCAGGGCTCAGAGGGCTGCCAAACCAGGGTTTAGGGAATCGGGGTGACTCAGACCTGGCAGATAGCCCGTGTCGGGTCAGCATACAAAGTGTTCTGAGTTTTGGAGCTGCACCGTCCAGCAGAAATAGGAGACGTGACCCTAATTGTGAATTTCTGAGTCGCCATGCTGATAAAGCCAAAAGAAAAAGGTGGAAGTAATCACAATACGTATTGCTCCACAATGGCAGCCAGTGGCAATGGCCCATCAGCGGCTCCAAATTGGACGGTGCAGCTCCAGGCTCTGCCTCTAGAACTGTCTGCTGACTTCAGAGGTTTCCCTAGCTGCAAAACAGGAGTCAGTTTGACGGTGCCTGGTGCCTACCTCAGGGGGAGCCCTGGGCTGGGGTTCCCCTGCCTGCAAGCTCTGGGAGGGTGGTGAGCACTCCCGGGTGCCTTCCTGCTGGCAGCCAGTGACCCCCTTTTTAATAAGCCTTTTTCCATTTGCTTGATGCCTTAGGCCAGCAGTAAAGGGATTCAACTGTCTTTTCTTCCAATGAACATAATTATTAAAATTTCAAGGACACAGAAAATAA EMBV3_35887 TGACCAGTCACCTCAACTCCACTTCCGTTGATCCCTACGACAGACACCTGTTGCCAAATT Gene GeneID:505756|RBM4B:NM_001045928:515_cdna Constitutive 0 NULL GeneID:505756 29 GENE RBM4B MGC137257 RNA binding motif protein 4B EMBV3_23652 TTCTCTCCCATCTGAACTGCGTACTGAGCGGGCAAGTTGGTTGTGAGTTCAGTAAAACCC Gene GeneID:281730|CTBP2:NM_175712:9_cdna UTR3_Alt 2 NULL GeneID:281730 26 GENE CTBP2 NULL C-terminal binding protein 2 EMBV3_42732 CTCTGACATCCCTAATCCCATTGGCTCTGAGAACAGTGAAAAGACTACTATGCCACTGTG Gene GeneID:282208|CSN1S1:NM_181029:14_cdna Constitutive 5 NULL GeneID:282208 6 GENE CSN1S1 CSN1 MGC133694 casein alpha s1 EMBV3_35063 AGGACCTCAAGAAGGCAGAGTTGCATTTGTGTACGGAAAGGGCCAGAGTTGACAGTCGTC Gene GeneID:528378|HAUS1:NM_001038557:134_cdna Constitutive 0 NULL GeneID:528378 24 GENE HAUS1 CCDC5 MGC134225 HAUS augmin-like complex, subunit 1 EMBV3_42479 CAGACAGCCCCCTCTGGCTGACTTGTGCTATTCTTGTCTTTGGACTTGTTTGGTCAGGGA Gene GeneID:514371|ACTR1A:XM_002698454:463_cdna Constitutive 0 NULL GeneID:514371 26 GENE ACTR1A NULL ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) EMBV3_07318 GAATGAGTCAATATGAAATAGCATCACAGAGGTTGTATCCTGAAGCTCTACTGGTTTCAC Gene GeneID:524465|AMN1:NM_001075858:8_cdna Constitutive 2 NULL GeneID:524465 5 GENE AMN1 NULL antagonist of mitotic exit network 1 homolog (S. cerevisiae) EMBV3_42540 TGACCAAGTCTCCCGTAGGATTAAGAGGTTGTTTGAGGGACACAGTCTCTGGTTTAGGCC Gene BVT0102_100714 + 0 NULL GK000019.2:27451109-27455596 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093007 TCONS_00093009 TCONS_00093010 TCONS_00093006 TCONS_00093008 1 XLOC_057047 Coding TCONS_00093010 XLOC_057047 Coding Coding BCL6B 19:27447121-27454434 j TSS69875 4465 1 TCONS_00093010_3 358 0.104591265397536 8 0.390454048140044 0.000422234102304381 0.00101961234053776 0.00138456377787675 0.000156825177428736 0.000977580620661994 0.000550829107670927 0.000489701395399037 8.32697751981001e-05 5.34616248611336e-05 3.26952237763911e-14 2.52283734079024e-18 2.29874612544706e-42 1.67648722365189e-12 0.000134856751609816 0.000414490925889738 6.42951369089668e-11 2.79898339870893e-87 3.61131516216403e-08 0.00248415371359953 3.66426233045634e-08 0.00102486639759721 2.02485387693616e-18 4.61658548046747e-17 4.99671808251682e-15 0.00130680868905224 0.000932853142067705 0.000809899152057022 2.24642521749038e-13 2.0584180391083e-16 4.21295325163002e-16 XM_005220174.1 BCL6B PREDICTED: Bos taurus B-cell CLL/lymphoma 6, member B (BCL6B), 0.0 4215 100.00 0.523180291153415 NM_181844.3 BCL6B Homo sapiens B-cell CLL/lymphoma 6, member B (BCL6B), mRNA. 0.0 2385 80.17 0.588801791713326 TCONS_00093010_3 sp|Q8N143|BCL6B_HUMAN BCL6B_HUMAN B-cell CLL/lymphoma 6 member B protein; 1e-147 431 91.19 0.631284916201117 6 coding 1 1 1 1 0.507951321375663 0.22070534293285 0.0400840204218885 0.394318382183693 GAGACCCCGCCCCCCTTGAGAAGAGAAGCTGAAGCCCCTGCAGGACGGGGGCCTCCGTCGCTATGGGTTCCACCGCTACCCCGGAGGGAGCGCTGGGCTACGTCCGCGAGTTTACTCGCCACTCCTCCGACGTGCTCGGCAACCTAAATGAGCTGCGCCTGCGCGGGATCCTCACTGACGTCACGCTGCTGGTTGGCGGGCAACCCCTTCGAGCTCACAAGGCAGTTCTTATTGCCTGCAGTGGCTTCTTCTATTCAATTTTCCGAGGCCGTGCAGGAGTAGGGGTAGACATGCTCTCCCTGCCCGGGGGCCCCGAAGCCGGGGGCTTCGCTCCCCTTCTGGACTTCATGTACACTTCGCGCCTACGTCTCTCTCCGGCCACCGCACCAGCAGTCCTCGCGGCCGCCACCTACTTGCAGATGGAGCATGTGGTCCAGGCATGCCACCGCTTCATCCAGGCCAGGCTTTCTCCAACTGCTGCCACTGTACAGTTCAAATGTGAGGCTCCAGTCAATACCCGCCATCAGCTCACACCCCAGGCTCCAGAGACCACTGGGTCACCTTCTGGGAGGGCTCATCCACCACCAGGAGGTGAATTTTTCAGCTGCCAGAACTGTGAGGCTGTGGCTGGGTGCTCATCGGGGTTGGACCCCGTGGCTTCTGGGGATGAGGACAAGCCCTACAAGTGTCAGCTCTGCCGGTCTGCCTTCCGCTATAAGGGCAACCTGGCCAGTCACCGCACGGTGCACACAGGGGAAAAGCCCTACCACTGCTCCATCTGCGGAGCCCGCTTTAACCGGCCGGCTAACCTGAAAACGCATAGCCGCATCCATTCGGGAGAGAAGCCCTATAAGTGCGAGACATGCGGCTCGCGCTTTGTACAGGTAGCGCATCTGCGCGCGCACGTGCTGATCCACACCGGGGAGAAGCCCTATCCTTGCCCCACCTGCGGGACTCGCTTCCGCCACCTACAGACCCTCAAGAGTCACGTTCGCATCCATACCGGAGAGAAGCCTTACCACTGCGACCCCTGTGGTCTGCATTTCCGGCACAAGAGTCAACTTCGGCTACATCTGCGCCAGAAACACGGAGCTGCTACCAACACCAAAGTGCACTACCACATTCTAGGGGGGCCCTAGCCGAGTGCCGCCCCGGCCCCACTCCCTTCCCGGAAGACGGAAAGCTGCGGCTCACGCCTGGGTTCGCTGCCAGGCTTGGGCGTGGGGGTGTGCGAGGCCCCTGGATATCAGCGACGGCCACCACCTTTAATTTCTCACTGCGGGGAGCAGGGGTGGGAGATCCTGGCCTGATCTGCCTCTGTTTTGCTGGTCAAAACCTCTTCCCCGCAATCGATATTGTTTCTGAGCAGAGAACAAGCTAGGAGCTGGAGCGGAGAGACTGGAAGCCTGATTTCCTTAAGGAATCAGGCCTCCACCTGCAGCCCCCGTCTCATTTGATTTATCTGTAAATATAATTTATTGAGGCTTCTGGGTGGCACCAGGGCCTTCATACTATTGCATTTCCCATGTCCCTCTTCTACAAGTGTGATCAAAAGTGACCTGAAACTCGGAATGTGAGGTCACAGCTCTGCTGGCAGAGATTAGCACTTGGCTGCCTCCTTTGGCTTGAGTGTTTTATATTATTATTGTCCAACTTTTATCTTTAGAATTGTTATTTTCCCACTTGCTCGTTGGTTTGTTTAAAATGGAGAAAAGAGTTCCCTGTGCCCTTCCCCTTCAATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCTGGGAACATGTGGGTTTGTGGAATTGGGTCAGGAACCCTCTCAAATATTCTGAATATTGTAGGTTTTCTAGCAGGCTAGCACTGGATATAGACTTTTTCTGTTCTTCCAAGAACCTATGATGAAATGGAGGTAATACATACCTCCTGGAGGCAGTGGGTGTGGGGCCTTTGTCAGTCCTGGAAATTGGGGGATGATTTGAGAGGCTTTCTCTTAGGCCCCTGACTGTCCTATTAGTCTGGCCACCTAGGTTTAGCTCCATGGTAGTTTTGGCTATCTGATAGAACTCACCCAGGAGCTTGAGCTGAGCCCACAATCCTCCCTGTAGGGGCCTGTTCTTAGCACGAAGTTGATCCCTCTATGCAGGAGAGATCTGCAATTCCATATCAGAAATGATGCAATCTTTTCGGAGTCTTCCCAGTCTCTTAAGAATGCTATGATCTAGGGGAGAATTATCTTGAGTAAAGACTATGACCTTTCCTTTACTGCAGAGCCATCTGGGTTAGAATGTTCCCTGGGGGTTCTACATGAGATGACCTTTTCTTCCTTTAGTAGGTATTTGGACATCTTCTGGCAAGTGTCCAGATTTCAGAGATTTCTTTGCCTCTAGAAGTCACAGGTGCTTGGTAACTTTCTTACCTTAGAAAAGCTGAGTGTGTGACCTGGTCTTCCCGTCACTACATTCCTGTCTGGAACCAGTGAAAGCACTAGAACCTTCCACAGGGACAGAAAAGGGGCTGAGTTCCATTATGGATTTGCTATAGTTGGGATTATGATCGAGATTAGTGTTGGGATTAAAGCTTTAAAAGACTGACTGATGGACCATCTAGTTGACCAAGTCTCCCGTAGGATTAAGAGGTTGTTTGAGGGACACAGTCTCTGGTTTAGGCCAAGTAGGTAGAAAGTTAGAAATGGGTTGTCTCTTAACTGTGTGGAGCATCTAGAATGTTAGGTGATACTCTGAAGTATTACTAGTCCTGCCCCTGTTGCTCTGGGGCCTGTTCGTTTAGGGACATGGGGTAGAGGGTAAGAAGCACTTTGAATTTGTGGGATGGAGCTTCCTCAAGACAGGTCAGTCCTAGTGGCTGTCACTTGGGGATTGATTAGAAAGCTACTCTTTTCCCTCTTTCCCTCTTAACCTCAGTGCAGAATTGAAGGAGGGAGGGAAAGCAGAGGAAAGAGTTGAGAAGAAACTATATATATATATATATTTTTAAGCATATTGGATGGGCAGGTGGAGAGTGCCAGGGGGTGGAGATGTTAGATCTTGCAAGACCAGAATCATGGAATAAAGAAGCCTCTCTGTGCTGCTTGTTGTGTCCTGGGTTCTTGCCTGTGGCGATCTGGGGACTGGGGAAAGAGGGTTCTTCTTCATGGATACCATCTTGGATTTTGTGCCCATCCCACTGTCCCATCCATTTTAAGCAGCCCTTGTTCTCCCCTTCCCTGCCCTTGCCTTCCGGCTCATTGTGTAGGAACCAGTGACTTCATGAAGTCTCTCCGGAGCCACCTGCATCCTGCTGCTCTTAAGTCACTTCCTGCCTTGAGATGTGGAGGTAGCAGGGAGAAACCAGGAAGCCACAAATAATACCAAGATGCTGGGGGATGCATCTGTGCAGGGGAACTTGATGCTTGGGACACCCCCTACCACCACGGAAAATGGATAGGACTTGGGTCCCCTAAGGACAACAGATGCTAGAGGTGGTGGTGAGAAGACCATGTGGTTAGAGCCAGTGTGCCAGTGCTACCCCTCCCCCAGCAGTGATTTCTTGGAATCCATCTAGTGCCTAGTACTCAGTTCTCTTCTACCCTTTCTCTTGTCCTGTGTGTCTTGGATGCACAGCTTGTTCTGCCCAGAGGATGAAGGGTCACTAATTCTGATAAATTACCTCCCTCTTGGACTTAAAATTCCTCATCTGTGAAATAAGTCCATTAACATGGAAGGAATAATTTCCTCCCAGCATTTATAGTTTGTGGTTGTGTGTCTCAGTCTTTTAAAACCCATGACATGGGTTAGATGTTTTTTAAGCACAAAACAAACTAAAGGAAAACCTCCCTTCCCCTCCCTCTATGGCTTATCCCCTGTTTAAAATAAGACCCACTAATATTACATATCTCCTGCTTCATGTGCATGCTAAGTCACTTCAATCATGTCTGACTCTTTGTGACCCTATGGACTATAACCCACCAGACTCCTCTATCCACAAGAGAGATTGGGATTCTCCAGGAAAGAATACTGGAGTAGACTGCCATGCCCTCCTCCAGGGGATCTTCCTGACCCAGAGATCTAACCCACATCTCTTACATCTCCTGCACTGGCAGGCAAGTTCTTTACCACTAACACCACCTGGGAAGCCCAAGGCATTTTAGTGTATAGATTTTCAATTCATCCCCCTGACAACCTAAAAGTAGGAATTATTATTAGCCTCAGTTTACAAGTAGGGAAACCAACTGAGAGATTCAGTATTTTGGCCAGGTTAATAAGCGATGAAGCCAGGACTGGAACCACAATTTGATTCTACAGACTGTGCTCTTAACTATTATGTTATATAGCCATACCAACTTCTGCATCTTTGATATAGTCCTTACCGGTCAAAGTTCTGCTCCACTTACAAAAAAAGAGAGAGAGAAAGAAAAAAACTTTTTGGGTATGACCATTTTTATTTCCCACATATAAAAAAGTATAAGG EMBV3_38959 TGAGCTGTGGATCTGGATTCTGCCAGCCAACCTACTTTTCCTCCCGTAGCTGCCAATCAT Gene GeneID:785121|KRTAP13-1:XM_002684593:26_cdna Constitutive 0 NULL GeneID:785121 1 GENE KRTAP13-1 NULL keratin associated protein 13-1 EMBV3_09758 CACTCACACAGCACCCAAGATGGGAAGTTAAGTTTCAGAAACAAAAGCCTCATTCATTAA Gene GeneID:535917|CA10:NM_001079609:2_cdna Constitutive 2 NULL GeneID:535917 19 GENE CA10 NULL carbonic anhydrase X EMBV3_03252 CCTCCTCCCAAGCTGCCCAACGGTGTGTTCACCCAGGACTTCCAGGAGTTTGTAAATAAA Gene GeneID:510434|MAP2K2:NM_001038071:6_cdna Constitutive 0 NULL GeneID:510434 7 GENE MAP2K2 MGC134398 MGC140486 mitogen-activated protein kinase kinase 2 EMBV3_06231 GGTCTCAGCAGAAGACAGGATGCCCTCAACAGCCTAGAAAGGACCCAGTAACATTGGTTC Gene BVT0102_006081 - 1 EMBV3_29513 GK000003.2:276532-329275 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171672 TCONS_00171671 1 XLOC_103894 Coding TCONS_00171672 XLOC_103894 Coding Coding SFT2D2 3:324399-345865 = TSS128014 6251 1 TCONS_00171672_1 160 0.0863861782114862 8 0.709154437456324 0.00126889461288148 0.000931179756649974 0.000991407398078336 0.000636320358205594 0.000376463276904766 0.000242645527369899 0.000605062730305968 0.000873476242162113 0.000660002311726531 2.50883168821993e-05 8.67841326352233e-05 1.44254791857879e-05 3.30476942882025e-05 1.08306969723794e-09 3.7536615989622e-05 0.00330138593724744 0.00145503153116097 5.18131446114879e-05 0.00215446088785712 0.00074730388470123 0.000194327921497383 0.000443993101478349 0.000135546022485278 0.0015325319406628 0.00152159906081048 0.00136143274506477 0.00130847693788054 0.000316227047125796 3.54123391888293e-05 0.000247597350893134 NM_001192122.1 SFT2D2 Bos taurus SFT2 domain containing 2 (SFT2D2), mRNA. 0.0 2374 100.00 0.210366341385378 NM_199344.2 SFT2D2 Homo sapiens SFT2 domain containing 2 (SFT2D2), mRNA. 0.0 841 82.22 0.133578627419613 TCONS_00171672_1 sp|O95562|SFT2B_HUMAN SFT2B_HUMAN Vesicle transport protein SFT2B; 4e-103 297 90.00 0.99375 1 noncoding 1 1 1 1 -0.0593824398388363 0.637723354691526 0.00271444641789267 0.954471954621933 GCTGTGGTTGGCGACGGCTGGGGCAGCACCCGGAAGAACCTGCGACTTAGCCAGCGCAACAGGCGGCTGGAGGGGCAGCCGGGTGGACCCGTCCCGCCATGGACAAGCTGAAGAAGGTGCTGAGCGGGCAGGACTCTGAGGATCGGGGCGGCCTGTCTGAGGTTGTTGAGGCAACTTCATTAAGCTCGGGCACCAGAATAAAAGGCTTCATTGCCTGTTTTGCTGCAGGAATTCTCTGCTCACTTCTGGGAACTCTTTTGCTCTGGGTGCCCAGGAAGGGACTATATCTGTTCGCAGTGTTTTATACCTTTGGTAACATCGCATCTCTTGGGAGCACTGTCTTCCTCATGGGACCAATGACACAGCTGAAGCGAATGTTTGAGCCTACGCGTTTGATTGCAACTGTCTTGGTGCTGTTGTGTTTTGCACTTACCCTGTGTTCTGCCTTTTGGTGGCACAACAAAGGGCTTGCTCTCATCTTCTGCATTTTGCAGTCTCTGGCCCTGACGTGGTACAGTCTTTCCTACATACCATTTGCAAGGGACGCTGTAAAGAAGTGTTTTACTGTGTGTCTTGCATAACACAGCCAGTTTTGCAAAGCTCTGGAAAACACCGTGGATGGATGTGGGTGGACCGTGTTGTAAATATCTTCTAAACCTCTGTCTCAGAGACATGTGCCTTTGATCTTGCAAGCAACACGTGGCTTGCATTTTGAACCTTTGAGGATTGGTTCTGGAGGCAACTGTGTGTTCCCAAACCCAAGTGTCTGCCACATGATACAAGAAATGGTTCTGTATCTGACAGAGTGGAATCTCCCTCATATACCTTTGGATGGTGTTCCACTGAGTTTTTATGGGTAAAAACCTTGTTAGCAGCAGCAGATAAGCCTTGGGAGCCAGTGATTCCCAGTTAGTGACAATGGCCCCATTGGATACAAAGGTGCAACAGGAAGGAATAGAGTTTGGGAATCCATGGGACTTTGTAGATTTGTCCCTCAGCGTGTCACGCCTGCCCCATACAACATGGATATACTTCTACTTTGGTGTCCAGGAACAAGCTGCCATCCTGACATTTGAACATGAGCCTGTGAAGAGCCTGGCTGTGGAATGAGGTAGAAAAGCACTTTCTGATGATGTGTGTTGTTTTTAAACCTGAACAGCTGTCTTCTGATTCCACACCTGTGAATGTATTTTCTTTCCTTTTTTTTTCTTTTATTGGAATATAGTTGCTTTACAGTGTTGGGTGGGAATGTATTTTCTAATGCTCATTGCATACTCGTCTTCTTGGGTTTTCATTTCTTTCTTTCTCCCTCCCCAATGTATCTTTACTCTTGACTTCCTGGAACGAGATTGAAAGAGAACAAAGCTGCGGCAGTAAATACTAGTGTTTCCTTTTGGACAGGAGCCAGTAGGAGGTGGAAAACCATGCTGCTCTCTGCTGTGTTCCGCCCCCACCACCATTATTTGTAAATGTTTGCTTTTAAACCGATTTTATTTTCCATTCTCCCCTGGAATGGGGCCAGGGGAGAGTAGGTGGGAAGACAGAGCCCAACCCTGGAGCCAGCAGAAAGTAGGCACGCCCACCCAGTGACCTTTAAACAGTCCCAGTGTTTTGCACTGGAGTCTGTGCTGGAAACAGTGGGAGAAGACACCAGGGGCTGCAAAGTGGCCACATCACAGCCTGAAGCCTGATCACAGACAGACTGCTTTCGTGTCCCTGATTTTGTCTAGTACTGGTAAGAGCCTTGTGATGAAGCAGAGACTGTTAACCCACTTGGCAGGCCAAAAAAATCAAGGCTCAGAGAAGTTACTAACCCTAACCCAAAATCAGAGTTGATGGCAGAACTGAGTCCTGAGCCTGGGTGCCCCCACTTCAGTCCCCTTTGTAACCCGCATTTCTGGATATGGCTCTGGTGATATCTCCTGTAACTATTTTCCCCGTTTTCATCAGCAAGCTTCTTCCTTTTCTGGCCCAGTCCTCTACATCATTGTATCTTCTCCTGCTTAGTCTCCCTGTGGGAAGCTTTCTCCTGGATCTGTGGCCTCTTCATCAGTTCTTTTGTGCGCGTTTGCCCTTCCTTGCTGCATGACCATCAGAATGTCCTGTATTGATCATCAGAGCTCTTGGCATTGCAGGGCCTCCAAAGTCTCCTTCAAAGCCAGTCTATTTGTGTTTGCCTTTCTTGTCTTCTTCCAGGTCTGGCCTGTCCACTCAGGCTCTTGCTCTGGGAGCCTCCAAACCAAACGCAGTGTTCCACCTCTTGTCTCCTTGCTTGCTAATTGCTGAATTCTTTCTTCTGCTGTAGCTGAGACCTCAGACTGGCAAGACTTTTCTTCTGATCTGGGGAAGGTATGAACAGGCCTGATGGTGCCAGAGTGAGGAACCAATGTTACTGGGTCCTTTCTAGGCTGTTGAGGGCATCCTGTCTTCTGCTGAGACCCCTAATATTCATTCAGCTAGAAGTGGAAAGTATATACCACTATCTGGGGTTACCTTAACATGCCAGGTGCTTCCAAGAGACTGCTCAGGTCTCAGAAGGACCCTGAATGGGGCCAGAAGGAAGTCAGGAGTCTTCATTGTTTCTTCTCTTTAAAGCTAATGTGAAACTAACCTGGTCTCACTGTGAGCTTCAACTAGCCTGGAGGCCACAGACAGCCATAGGATCTCTGGAGGCTACAGACAGCCACAGGGTCTCTGTGGCTGACCCCTCTGTACCTGTTTCAGAGGCTGGACTTGGACTTTGTGAGACATGAGGTTAAGGGGTCACCTGGCCTGTGTGATGTAGTGGTAGTTAATGTGGGCTATAAAGTTAAACAGGTCCGGGTGAGTTGTGGCTCAATCACATGCTAGTGTCAGGTTGAACAAGCTCCTTAACCTCTGGTCTTCATGTTGCTCATCTGTTTAAAAATAATGGGGATAATTGCTGCTGGATCATTGCAGGATGTCAATGAGAAATATGTCAAGTGCTTAGCAGGGGGCCCAGCATAGGTAAATATCTCAGTAAAAGGTGGGTATTATTATTTAAGCTTGACAATAATGGATGACCATTGAAGGTGACAGGGTGAATGTCTCTGGTCATTAATTTATCTAAAAAAATTTATTTTGTAGTATGTGTCTGGCACTATAGACATCACCATGCAACATCTCACTGAATATTCACAATAACTTTGCTAGGCTAGCAGTGTATGCTAGTTGCTGGGTTGTGTCTGGCTCTTTGCGACCCTACATACTGTAGCTCACCAGGCTTCTCTGTCCATAGGATATTCTAGGCAAGGATACTAGAGTGAGTTACCATAGACTAGCAGTCTTGTCTCTATTATTAGACAAGAAACAGCCTCGGAAAGGGTAAAGGGTCTGTACCAGATCTCACTGGCAGAGGACGCCAGTTCTTAGATAAAAGCTCCTACTTTGTCTACTCTTGAGTCCTGTGGCCAGTTTGCTCAGACAGGTCCATTCCAACACCTTAGCAGCTCGGGGGTGATCTTGCCTTCCAGGATCTTCCCAGACTCCTACATTTTTCTTTCTGCTGCCTTACCTTTTGGTTGGTTCCCTACTTGTTTTTGTCTGCCGGATTGGAGGTGCCCATTTCAAATGTACTGAAATCTGTTACCAAGCAACAGTGCCGGTTAAAAAGCAACCCCATGGATGAGACAAGGAGTGGAGAGTTAGGGCTTTAGATCCTGTGGCTGTTCGTGGTCTGTTTCCCTGCTCCTCTGCCTTCTACCTTACCTGTTCATTGCTGGGTTAGATCTTTGCATTTTGGAATGAAGGGAGCCATTGAGGTGGCTCTTTTGTAGACAAGAAATGTGTGTGTTCAAGGCGGCGCTTCCAGCAGCTGGCTGGGAGGCCGGCCTGAACGCTCCTCCTTGGCCGTGGTGGTCTGTGACCACTGTGCTGGGAGCAGCACTGCTCTCCCGTCCTGGAGGCCTGGCTTCTTAGGTTTCCCCGCCCCTTAGAAACTGCTAGTCTGATGCTGGGCCAGCGTGTTTTCTAACTCATTGCCCCCCATCTCCGGTCTCAGAGTTCTTCGCTTTTGCCTGATGTGTTCAGGGTGGCCTCTGGCTCTCCAACTTCTCTGCGTGGCTGTGCCCATGGCTATGGGCTGCTGAGACCTGGCCCAAGGTTTCCTCTTTCTCTTCCACAGACTGTCTTGTCTCTGGGAAGGAGCAAAACACTCTATCTGGCTGAGCATTCTCATTGGCCTCATTATCAGTGCTTGGAGCTTCTGTGCATCACTCCTCTGTGGTGATTGTGGATTATCCACCTGAGTGCTACCCTAATCAGTATATGCTGAGAAGCAAGAAATATAATCATGAAATGCATCTAAAATTACTTTTGGATACTTCCATTAGGAAAGATAATTAAGAAGAGGGTCATACCTTAAAAAAAAAAATGGTGTGAGGGCACTGGTTTGGCTGCTTCTGCTTTTGGTATCTCCACAAGAGTGACACATGTTATGACACACGTGATGAGACTTGGTGGAATGAATTAGAAAATAAAACTGCAGCCCTGTGACTTCAGTATTCTTTTTGTATGGGGTTGCCTATACAAGGCTTGTCTTCTCATCTCTTTCCTCAGATAACTTCTGACTAGAGTCAGCTACAGAATTACAGATACTTCAGAGTTCACAACCCATCCTTAAACTTCATTTTAAGCAAATAAAAACAACAAAATCAGTGTTTAAGGTTTATAAAGTCATTTTGCTAGATAGTAGGCATCATTCTTTTGATTTTAAAATCCAAGACTTAAGTTTTTAGATACGCAGTAGTTTCCTTGCAGTTAGCATTTTTAAAAAGTGAATAGACTCTACACCTGATGTGTAGCTGTTGAAAAGATTAACAAAAGAATTTACATTTAAAAGTCTACATTTTTTTTAAACCAATTTTTATTTAAAAAGTTGGAAAGTTAAATCATGTGACTTTAACGTACCTTCTCATTTATAATTTTATGAAAGTCTGAGACCTTGAGGGTGTTTTGGTCATGTGAAGAGGAGAGTGCCATGCAGTGTAGTTGCCCAGTTTACTTGGGGTAAGGCATTTAGTTCTACTTTTCAGTTATCTAGTTCTACCCTGAATGCCTTGATAACACTCCTAAGGCCCTGGTATGCTTACGCTTTGCTGTTTTTGGCTCAAATTTCTGCCCCTTGGCTTCACAAAGCAGAGATCTCGCTGCAGGGCTTGTGAGCAGAGCCCAGGGACCATCAGTGCCTTTGTTGATGTAAACTGACAGAATAACATTATGTTCTTTTTTAGCTGGAGCTGATAAACTGATGATGAGCTTGAAAATATACAAAGCATTTTCTATAGATGGAATGAACTGAAAGCAGGGAAGAGTATCTTCACTAGGCAGAAGGAGCATGGCTATTTGAAGTGAAAGGTCAATCCATAGCATTGTAATAAACAATCCACAGCATCGTAATAACTACTACTATTGATGTGTATATTCAGAACAATATCACTACATTTTTTTAGTGGAGGGTAATTGCTGCAGTGGTCATTACATTTAATAAATAGCACCAAAAAACAGACATAGCATAGGCAAAAATTCCCTGATATAAATGGCTGCCTAGATTTAATATCATTGTGGATCCGTCCGTGGGAGCCATCCTTTGAGACCAAATGGAGACTCAAACTGGGCAGAATGTTGCTTTCTGCCTGTTGAACTTCCAAACTGCACCTTAAGAGGTTAATGCACCTTAAGTGTGGATGAACCTTATACTTGTTTAGTGTCTTAAAGGAGAAACACAGTTGACATGCAATCTTGTGGTCTTAATGCTATGAAAAGTGCTTTCTTTGCCTTTTTCAATATATTTGCTTGACTTAGCCACTTTGAACAAGGAAAAACAATTAAAACCTGAACTATGATCTTTTGCTGCTTTGTACATTCTGATTGTGCAGTTGAGATGACGGATTTTTAAAAGCCCCTGGGGAGTTTATATGCCTACAGAACATTGTGCCTGTTCTAATATGATAAGCTTTTAAGACACTTTGTTAAAAATTCAATTTTTATAATTGTATAGATATTCAGCTAATTTTGAATGCTGCTGATGGCATACCTAAATTTTTATGTCAAAAATATATTGTGTGTTGTTTTTCCTACCTTGAGATCCTATTTCATACAATGAATATTGTTTTCTTTTTACTAACTCCTTTCAAAGAGAAAGAATTTTACTGTTAAGCAAGCTGTTTTTCCCCCAAATATCACAAAACTTTTTTTTTCTCTAATAAATGAGAGCATTATGATCTTTAATA EMBV3_42508 GGGAGAAGGGCTTCGGGTACAAAGGATCCACTTTCCACAGAGTGATTCCGTCCTTCATGT Gene GeneID:414346|PPIF:NM_001001597:260_cdna Constitutive 0 NULL GeneID:414346 28 GENE PPIF NULL peptidylprolyl isomerase F EMBV3_38618 CATCTCATTTAACCCTGACAGACAGGTCAGTTCTCAGCAGAAATGGAAAACACGCCCTGC Gene BVV0102_281108 - 1 EMBV3_24352 GK000019.2:43321168-43360442 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28136 AATATGGGATGCGAATAAAATTGCTGATCCACGGCAAGCGATCTCGACAATCCTGCTGGG Gene GeneID:100297034|LOC100297034:XM_002690158:20_cdna Constitutive 0 NULL GeneID:100297034 9 GENE LOC100297034 NULL hypothetical protein LOC100297034 EMBV3_21139 CATCAACCTGAGCCCCTTCCTCTTCAGCCGCTTTTACTTTGGAGAGAAGGCCCAGGAACA Gene GeneID:510097|FOXRED1:NM_001034371:14_cdna Constitutive 1 NULL GeneID:510097 29 GENE FOXRED1 H17 MGC140470 FAD-dependent oxidoreductase domain containing 1 EMBV3_27860 TCTGCCGTTTTTACGTCCGGATTTGGCCAGGAGGAACAACACAGCATGCTGGGCTCTGGA Variant GeneID:508900|IST1:NM_001034335:156_cdna 69^149 1 EMBV3_15820 GeneID:508900 18 GENE IST1 KIAA0174 MGC128433 KIAA0174 EMBV3_24727 CCCACAACTGGCTCTTCACTCCCGTCAGAGGAAGTACCCTCCTTGAAAATACTGAACATA Gene GeneID:539295|ARFGEF2:XM_002692495:602_cdna Constitutive 2 NULL GeneID:539295 13 GENE ARFGEF2 NULL ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) EMBV3_33061 CCAGGATTACTCTGGGGGCTTTGGTTACTATCGATGTCCATGCTAGAGATGTGGTCATGG Gene BVT0102_161373 - 1 EMBV3_03233 GK000022.2:44213533-44277965 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126886 TCONS_00126890 TCONS_00126878 TCONS_00126887 TCONS_00126880 TCONS_00126883 TCONS_00126884 TCONS_00126879 TCONS_00126882 TCONS_00126881 TCONS_00126888 TCONS_00126885 1 XLOC_077522 Coding TCONS_00126884 XLOC_077522 Coding Coding LOC100847355 22:44197874-44263137 j TSS95043 4359 3 TCONS_00126884_2 515 28 0.933636725812877 3.6530965709198e-139 5.25828612441671e-263 2.17932299880526e-153 0 0 0 0 0 0 0 0 4.70851051983228e-50 0 8.71999542621762e-39 0 0.000117763990200975 2.67812576148542e-51 0.000952374898375918 3.58160731293603e-178 0 0 0.000304262461526482 0.000142498596488498 5.64747429835194e-05 0 2.77006167789417e-05 0.000197534513887991 9.37057982195929e-71 3.50693783492705e-59 2.0689103173218e-05 XM_005196457.1 LOC100847355 PREDICTED: Bos taurus dynein heavy chain 12, axonemal-like (LOC100847355), mRNA. 0.0 4172 99.96 0.531543932094517 NM_178504.4 DNAH12 Homo sapiens dynein, axonemal, heavy chain 12 (DNAH12), transcript 0.0 5391 90.93 0.887588896535903 TCONS_00126884_2 sp|Q6ZR08|DYH12_HUMAN DYH12_HUMAN Dynein heavy chain 12, axonemal; 0.0 933 91.98 0.966990291262136 2 coding 1 1 1 1 -0.0451082459218202 0.739056364785003 -0.0228671215568821 0.778918250136054 ATGTCAGATCCAAACAAAGCTGCTATTGCAGCAGAAAAAGAGGCCCTGAACTTGAAGTTACCTCCCATTGTTCGTCCCCCTGAAGACATAGGTGTTGACACACCAGCACAGAGTAAGTTGCTGAGTTACAGACGATCCAAGGAGCAGCAGAAGACAATTAATCAGTTAGTAATTGAAGGAGCCAAAAGGAATTTAGACAGAACACTGGGTAAAAGAACACCTTCATCACCAGAGCCAGATTATCCTCCAACTATGACCAGTGAAATTAAAAAGAAAGCATTCAACTATATTTATTTGAAGCAATGTGTAGAGAGTAGTCCGATAGTACCTATTCAGCAGGAATGGCTGGATCACATGTTAATGCTGGTACCTGAGTCTTTGAAGGAAGGGAAAGAACAAGAAGAACTTGTTCAAAGTCTCATAAACGAGGTGTCACGTGATTTTGAAAAAAGCATGAAGAGATATTTGGTGAGAAGTGTTCTTGTGAGACCTGATATTAATTGGCTTGAAGATGAAGGTGGCCCTATACCTGAATCCCCTGTAGGCCTGGATTATTCTAAGCCTTGGCATTCTAACTATCTGCAGACAAGAAACCAAATATTAGCTAATTTGCACATTGTTCATCCAAGCATGAAAATGTTACTGGACCTTGGTTATACAACATTTGCCAATACAGTTTTGCTAGACTTAACTGGAATTAGAGGTAAAGGCCCCATTGATTGTGAATCACTAAGAAATGATTTATCAATACAAGCTAGAAAGGCAGAAGAGAAGATAATGAACACTTGGTATCCAAAGGTTATAAATCTCTTTACCAAGAAGGAGGCACTAGAAGGCATTAAACCTGAGAAACTGGATGCATTTTATAACTGCGTTTCCACACTTATGTCAAATCAGCTAAAAGATCTCTTAAAGAGAACTGTAGAAGGATTTGTAAAACTCTTTGACCCAGAAGATCAACGAAGGCTGCCCATATTTAAGATGGAATTGACTCTTGATGATGATAAAATGGAATTTTATCCTACTTTTCAAGATTTGGAAGATGTTGTCTTTGGTTTGGTTGAGCGAATAGCTGAAGCTCTGCAGAATGTCCAAACAGTACCCTCTTGGCTATCGGGAACTTCAACACCTGTGAATCTTGACACAGAACTTCCTGAACATGTGTTACAATGGGCTCTTGATAAGCTGAAGGTGGCGGTGCATTGTAACTTAGAAGGCGCAAGAAAACATTATGAGACATACGTTGAAAAGTACAGTTGGCTCATTGATGGGACTGCTGTTAAGCTGATAGAGACTTTTCAGGCAGAGGATCATACTTTTGATGAATACACAAAGTTTATAGGAAAATTTTTCAATCTTGCTTCAGAAATAATGCTTTTGCCTCAGTGGGTTCATTTCCCTATGGTGCGTTTGGATTGTGAAGATTTGAAGACAGGCCTAACAAACAAAGCAAGAACCCTTTGCAAACATGTTGCTAAATGATATAGCTTCAAAACATAGGAAAGAAAATGAAAATATTTGCAGTGAATTTGAAGCAGTTAAAGAGCATGCATTAAAAGTTCCTGAGACAACAGAGGAAATGATGGAGCTTATATCTTATGTAGAAAAAGCCCGAACTGTAGGAATTCAGGAGTTGGTTTCACGGATCAAGGAATCCAAACGCCGGATGAGTTACTTTTTAGATGTATTTCTATTTCCTCCAGAAGACTTAGCTTTAAATTCAGCTGTCCTTATGTGGCCTTGGAAAATTAATCCCATCTTTGATGAAAATGATGAGCTCATTGAGAATGCTAAACATAGAAAAGAAAATGAACTAATAGCAAAGAGAGAGAAACTGATTTTGGAAGTAGAAAAGGAATCACGGCGCATGGAAGAGTTTGCAGAATTTGCAGAATTGGACCGCATGCAACAGTATGTGACAGATGTAAGACAACTACAAAAACGTATTCAGGAATCTGAAGAAGCAGTTCAGTTTATTAATAAAGAAGAGGAACTTTTCAAATGGGAACTGACAAAATATCCCGAACTGGATAAATTAAAAGTTAACATTGAGCCCTATCAGAAGTTTTTTAATTTAGTTTTGAAGTGGCAACGAACAGAAAAACGGTGGATGGATGGAGGGTTTTTGGACCTTAATGGGGAAGCCATGGAAACTGATGTAGAGGAATTTTCCCGGGAAATTTTTAAGACTCTGAAATTTTTCCAAACAAAGCAAAAGAAGGAATTACAAGAAAAAAGAAAAGCAGCAAAAAGACGATCTCTGGAAGAAGAGAAACTTGAAGAGGAACCAAAAGAGAATCCTACCATTACTATGTGCAGAATGAGAGCACGTCATTGGAAGCAGTTATCAGAAATTGTAGGCTATGACTTAACTCCAGACTCTGGAACTACACTGAGGAAAATTTTAAAATTAAACCTTGCACCATACTTGGACAAATTTGAAGTGATAAGTGCAGGTGCAAGCAAGGAATTTTCATTAGAGAAAGCCATGCATACAATGATGGGAACTTGGGATGATATTGCTTTTCATATAAGTTTATATCGTGATACTGGAGTCTGTATTCTTTCTTCAGTAGACGAAATTCAGGCTCTCCTTGATGATCAAATTATAAAAACTCAGACAATGAGAGGCTCACCATTCATCAAACCATTTGAAAAGGAGATCAAGGCGTGGGAGGACCGTTTGATTCGAATACAAGAAACGATTGATGAATGGTTAAAGGTACAAGCTCACTGGCTATACTTGGAGCCCATTTTTTGCTCTGAGGATATCATGCAACAGATGCCAGAAGAAGGGCGTCAGTTTCAGACAGTAGACAGACACTGGAGGGATATCATGAAGTTTTGTGCGAAAGATCCAAAGGTTCTTGCTGCTACTTCTTTAACAGGTTTACTGGAAAAACTGCAGAACTGCAATGAACTTTTGGAGAAAATTATGAAAGGCCTTAACGCATATCTTGAAAAAAACGACTTTTCTTCCCTCGTTTTTTCTTCTTATCTAATGATGAAATGCTAGAGATTCTGTCAGAGACCAAAGATCCACTTAGAGTTCAGCCTCACTTGAAAAAATGCTTTGAAGGCATCGCCAAATTGGAGTTCCTTCCCAATTTGGATATTAAGGCCATGTATAGCTCTGAAGGTGAGCGAGTGGAGCTGATTGCACTAATTTCCACATCTGCAGCTCGAGGTGCCGTGGAAAAGTGGCTCATTCAAGTAGAAGATTTGATGCTTCGAAGTATTCATGATGTGATCGCGGCAGCCAGGCTGGCTTATCCAGAATCTGCAAGAAGAGACTGGGTTCGAGAGTGGCCTGGCCAGGTGGTACTTTGTGTTTCTCAAATGTTCTGGACCTCTGAGACACAGGAAGTTATAAGTGGTGGAACAGAGGGATTAAAGAAGTACTATAAGGAACTTCAGAATCAACTAAATGATATTGTGGAGCTGGTAAGAGGAAAACTATCAAAGCAGACCAGGATTACTCTGGGGGCTTTGGTTACTATCGATGTCCATGCTAGAGATGTGGTCATGGACATGATTGATATGGGTGTCTCACATGATACAGATTTCCAGTGGCTTGCTCAGCTTCGTTATTATTGGGAATATGACAACGCTCGAGTTCGTATCATTAATTGCAATGTAAAATATGCTTATGAATATCTTGGTAACTCACCTCGACTTGTCATTACTCCTCTAACTGACAGATGTTACAGAACATTGATAGGTGCCTTCTATTTAAACCTTGGAGGTGCTCCAGAAGGGCCAGCAGGCACAGGAAAAACGGAAACCACCAAAGACTTGGCTAAAGCTCTTGCTGTACAGTGCGTGGTGTTCAACTGTTCAGATGGGCTCGATTATCTAGCAATGGGAAAGGTGCTTTTCAGAACAGTGGCTATGATGGTTCCAAACTATGCCCTCATAGCAGAAATCTCCCTCTACTCCTACGGATTTCTGAATGCAAAACCTCTGTCTGTGAAGATAGTAATGACCTATAGGCTCTGCTCAGAGCAGCTCTCATCACAGTTTCATTATGACTATGGAATGCGAGCAGTAAAAGCAGTTTTAATAGCTGCTGGAAACCTAAAACTAAAATTTCCAAATGAAAATGAAGATATCCTTCTTCTTCGATCAATTAAAGATGTAAATGAACCAAAGTTTTTATCACATGATATACCCTTATTTAATGGAATAACTAGTGACTTATTTCCTGGTGTTAAACTTCCTGAAGCCGACTATCATGGTAAGGTGAGGGGACAAAAGCTGAAGAAGATGGTGAGAGGAAGAAACGGAGTTTGAAAGAGGGAGTCCATGAGAAGATGTAGCTCCAAATCTTTTGGGGGCAACACAGAAATAGAGGCTTAA EMBV3_12905 GCTGCCCCACACTTCAATACTCTACAGTCCAAACCTCTAGGACTCACGGACATCTGAGCA Gene BVV0102_063056 + 0 NULL GK000013.2:28799379-29501665 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044887 TCONS_00044886 TCONS_00044885 1 XLOC_026305 Coding TCONS_00044887 XLOC_026305 Coding Coding FAM107B 13:29499891-29578131 j TSS32898 3218 1 TCONS_00044887_1 131 5 0.958933524201485 0.00559961760492273 0.00495347139198876 0.00373759913198655 0.00312848895072657 0.00382789502599349 0.00127879953055151 0.00306362166716239 0.00155394648753006 0.00383176298958153 0.000529965424614275 5.8729703805476e-11 6.17294973217531e-05 0.000881565390400393 0.00115472316321297 0.00109683711044855 8.65977203600484e-05 9.05082510748506e-06 1.28363324353261e-09 0.00303267643529394 0.0029050706998583 0.000604917500810473 0.000168754911031886 4.04744474055886e-11 3.134863145727e-09 0.00387826490124922 0.00428016991590296 0.00347788570786707 7.56966002446782e-09 6.43805764217136e-08 4.99895330611e-05 XM_005214223.1 FAM107B PREDICTED: Bos taurus family with sequence similarity 107, member B (FAM107B), transcript variant X3, mRNA. 0.0 5341 98.12 0.941578620261032 XM_005252615.1 FAM107B PREDICTED: Homo sapiens family with sequence similarity 107, member B (FAM107B), transcript variant X2, mRNA. 0.0 1258 72.53 0.706339341205718 TCONS_00044887_1 sp|Q2KI00|F107B_BOVIN F107B_BOVIN Protein FAM107B; 4e-86 251 99.24 0.99236641221374 1 coding 1 1 1 1 1.02899703956991 0.240650604190575 0.0281846772512731 0.652115218586873 GCCCCGCCGCTTAATTTGGACGCGCCGGGCCGCGGGGTGTGAAAGAGCCGCCCAGCGCCGGACGGGTAGCCGCCGCCTTCAGAACCGCCGCCCGGGCCGCTCTCAGCTGCTGGGCCGCTGGGTGCCGCCGCAGACACCCGGAGCGAGCGCCGGGGAGGGAGCCGCGCGCCTTTGTGCGCGCGCCGAGACAGCCCACTGGAGGATTCTGACCCCAAGGACAAGTATCTCATCCCGAGAAACATCATGGCCGAGCCAGACTATATAGACGATGACAATCCTGAACTCATTAGGCCTCAGAAACTAGTCAATCCTGTTAAGACGTCCCGGAACCATCAAGACCTTCACAGAGAACTTCTTATGAATCAGAAAAGGGGTCTTGCCCCTCAGAATAAACCAGAACTGCAGAAAGTGATGGAAAAGAGAAAACGAGATCAAGTAATAAAGCAGAAGGAAGAAGAAGCACAAAAGAAGAAATCTGACTTGGAAATAGAACTATTAAAACGGCAGCAGAAGTTGGAGCAGCTTGAACTTGAGAAACAGAAATTGCAAGAAGAGCAAGAAAATGCCCCAGAGTTTGTGAAGGTTAAAGGCAATCTCAGAAGAACAGGCCAGGAAGTGGCGCAAACCCAGGAGTCGTAGGTCCAGGCTGCAGAGACCACGCACCCAGCCCAGCACACAGAAGGCCTGTGCCAGGGCCTCCCCAGCGCCTAAGCTCAGGGCCAAAGCCCCTGGAGTGAATCCCAGCCAGCAGAGATCTGTTACTTTCAAAAGGGTTTGATTTTGGTTTTTCTCCCATCCGGGTGGGTGAGTCGTCTGTGACTGTTGCAGTTCCTATTCGCCAAACAAAGGATGTTGACCAGCACTTAAGGTGGGATAGTGGACCTGTGTTCAAAGACTTTTAAAAGACAACAGCAAGAAACAAGGGAAGAGGACACTGGAATAAAGAGCCTTTTCTCTTTCAAAACCTAAAGGAGACACCTTTCGTTCTTCCTTTCTTATCTATCCAATAATTTAGATTGCACAGAAATGCATTGAATCTGTTACATCCACCGTTTGTAAATTCCGTTTTCTTGTCTCATTTACACTCTCACCCAGTTTAGGCTTCACGCTGGAGAATGTGAATATTCATGTTGAGCACAGCTGTTACCTTTGTTGACATTAAGATTCAGAAATAGGATGAGGAGGTGTAAAACTACAGAAACAAAATTTAGAAACAAAACTCTGTAAATGTCCATCTTGATCTTATTTTCATTCCTGCTGGTTTTCTGAGGCTTCACAGTGACCTTCTACTTCAGGGAAGGTATGTCCTACAAATCCGGGTATTGCTTTGATAACTCTTAGGGCTTTTGTTTCATTTTTGTTTTTAATTTCTTGCTCATTTAGTCCTTTCATGTGAAATAATCTCCCAGCCCTTCGAGAAATAAAACTAGTCCGAATAGCCCAACTTCAGTGTCAAAGGAGTGCGTTCAAGTCTTTTGGTTTCTTCTGAGAACAGTATGGGGAAAGCTCCCACCGGAAGCTTGGGAAGGAAGAGTTCTTTGGGCTTTTTGATGTGAAATGAATATGAACTGGTCTCTGGAAGAATTATAGCATTTATGCATTTTGAATATTATTTGAATCCAAGCTTTGAAATTCTCTAATGATCACCAGCTCTTTGCCCTTTTTCCTTGTGAAGGAAGACTGTCTCATCCCTACCTTCGTGATGGTGATACTGTTGGTAAGGATGATGTTATGACCACTGTTGATCTCTCAGGAACAGCTGAGGGGATGGGGCACACTCAGTCTGTGCTCTCCAACTGGCATACTATCCTCCACATGAACCCCGAATTACCAACTTTACAGCAGATTCTTAATGCAAAATCCATTCTCTGTCATCAGTATGGGCAGGGGAAGCATTTCTACTTGGGGTGGTTTAGAAGAATCTGTGTGGATCCAGTATGTTCTCTGTAGAAATTACTTATCCAGTAAGTTCGACATTGAAGGCTCTTCTTATAATTCAAGAATCAAAGAAAGCTGGATCCTAAGCTTTTGAATCCTTAATCAGCCTAGTAGAAATTAGCTTTCTCTGGGAATTCTGCAGTTTTCATGGTTGGCCATTAGGCTTCTATTCATCCCTAATGTGAACAAGACAAAAGTAAATGCAGAGATAATGTACTGCTAGTCAGAGAACATGTGGACTACACCTGAAACATTTCTTTCATCAGCAAGTATTATATGAATAAAATACGAGGTGCTTAGGATAAAATGTTGCTGTATAGTAATTTGCTTTGGAAGGATGGAAGGATACCTATTTTTTCCCATCCTTCTTTTTGCAAGAAGAAAGTGCGTTAACTAAGCATCTTGAAAGTACATTTCTGATTGCACATTGACTAGAGTTCTTTCTCTGTGTATACGAAATAGTGATGCGATTTATAAAATGAAGATTCAAAACTAGCTCATAGCCTTTAATCCAGCTGGATATGCAAGATCTTTAGATCCTGTATCCTTGAAGCAATTCTGCCACTTGATAAAATTTTCAAGGGCCCAGACAGGCTTCTTCAGAAGAACCAATTCTGTTCCCAGAACTTACCTAGAATTCATGCTTCACTGGGAAAAGCTAAATTCCAAAAGCATTTCCCTCTCAATCTCACTCACAAATCTGCAAAAGTAGTAGCGGTTGGTAGTCCAAGGTCTGGCTGAAAGAAGACTTGTAAATAGTGTCAAGTTAAGTTTCCTCGCTAAACAGTGGAATGTACAGATAGAAAAGCTTTTTGAATTTGCCAGGTCAGCCCGGCTCATAAGCTTGAGTTTAAAAAGGCATCATTCTCTCCCTCCCTGCTGCCCCACACTTCAATACTCTACAGTCCAAACCTCTAGGACTCACGGACATCTGAGCAGTTTTGGGCTTTGAGCCACTTTTTGACAAAAATGGCTCCATTTTTCCACTCTATGGTTTTCTTAAAATAGCTCAGTGTTTTCTAATCTCCAAGTAGGAAGGTAGTGTTGCTTTCTAAGCTACCACAGTTGACTTTATTCTTCTACTCTGAAAAATGTTCACTTGTTTGAGTGTATATAATATATATAAAGGGAGCCTTAATGGATTTGTTTTCATAATTTAATATTTTTTGTATTTGCTCTTGTATAATTGTTTTTAATGGAAAGTATTACAGAATTAAGGGTGGAATTCTTAGAACCAAAGTTATTCTTAATAAAAATCACCACATGCTTGGACCATACAG EMBV3_34942 GAGTACGAGAAGAGCTTGCAGTTTGACGAACAGTGTCTCAGTGTCATGCTTGCTGAGTGG Gene GeneID:618324|RPAIN:NM_001076500:183_cdna Constitutive 1 NULL GeneID:618324 19 GENE RPAIN MGC133584 RPA interacting protein EMBV3_28887 AGCATGTGGAGTCTTCACTGTGGCATGCAGAGCGCATGGGATCAGTAGTTGCAGCACGTA Gene BVV0102_131129 + 0 NULL GK000003.2:84657975-84711663 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178818 1 XLOC_108591 NonCoding TCONS_00178818 XLOC_108591 NonCoding NonCoding - 3:84662512-84663254 - TSS133577 742 1 TCONS_00178818_3 82 0.491913746630728 1 0 0 0 0 0 0 0 0 0 0 2.21805726305444e-05 0.0015795999278149 3.85518617427718e-05 0 0 0 0 0 0 0 0.000416753410207916 0 0 0 0 0.000196088855407533 0 0 0.000220064493631741 3.27129594510026e-05 6.48220939160154e-05 XM_005225438.1 PDE6C PREDICTED: Bos taurus phosphodiesterase 6C, cGMP-specific, cone, alpha prime (PDE6C), transcript variant X1, mRNA. 2e-27 127 79.72 0.191374663072776 0 noncoding 0 0 0 0 0.0761447340620128 0.490076112162777 0.0415507073556795 0.430806439977752 GAGATCAGTCTATTAACAATCTATGCTTTTGGAGTTATACTACCCACCTTGCAGGGTCGTTGTAAATTAGCATTAATGAATGTTAAGCACCTGCCCTGGTAATGGTACATTGTAGGCACTCAGTCAGCCTTGGCCACTACTACTGTTTTCACAACTCATTGATCCTAATGCATTTTCTAGTTACTAACACTGCTCATTTCCTCATTGGCCAGCTTAAGTCTTATCATTAATTATGACATCATTGCAGCCCTACATAAATCCTCAGTTGTCGGAACTTCCTTGATGAACCAGTGGTTAAGAATCTGCCTTCCAATACAGGAGATATGGGTTCAATCCCTGGTCAGGAAGCTAAGATCCCACATGCCATGACACAGCTAAGCCTACGTGCTGCAACTACTGATCCCATGCGCTCTGCATGCCACAGTGAAGACTCCACATGCTGCAGCTAAGACCTCATGCAACCAAAAATAAATTTTAAAAAAGAATAAGAAAAAAATGTTTAAAAAAATTCTCAATTGTCTTTCTCCTTTCTTTCCTCATCAGACTTCTATGGCAAACCACCAACCTTTCTTCTTAAATTGCCACACTTACTCTGAGTCTGTGAGCTTGCTTCCAATGTCGCTAAGGAAACACAAGCACTCAAATGGTAACATTCACATACTCCCATCCCCATATCCAACCACCTCCCTGCATCTATGCATAATTCTCTCAGATGACCTCCTAGCAAAAACCAACCCCTCTC TCONS_00173914 TCONS_00173915 TCONS_00173916 TCONS_00173917 TCONS_00173918 TCONS_00173919 TCONS_00173920 TCONS_00173921 TCONS_00173922 TCONS_00173923 TCONS_00173924 TCONS_00173925 . 3' 82074 TCONS_00173914 TCONS_00173915 TCONS_00173916 TCONS_00173917 TCONS_00173918 TCONS_00173919 TCONS_00173920 TCONS_00173921 TCONS_00173922 TCONS_00173923 TCONS_00173924 TCONS_00173925 . 3' 82815 EMBV3_23149 GCTGAAATGATCCACCTCATATGTGAGTCCGTCCAAAAGATGTTACTATTCTGGGTGGGC Gene BVT0101_021181 + 0 NULL GK000006.2:62222096-62295687 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203333 TCONS_00203344 TCONS_00203337 TCONS_00203335 TCONS_00203325 TCONS_00203346 TCONS_00203332 TCONS_00203336 TCONS_00203350 TCONS_00203324 TCONS_00203353 TCONS_00203323 TCONS_00203345 TCONS_00203322 TCONS_00203352 TCONS_00203340 TCONS_00203338 TCONS_00203357 TCONS_00203351 TCONS_00203343 TCONS_00203339 TCONS_00203342 TCONS_00203347 TCONS_00203321 TCONS_00203354 TCONS_00203341 TCONS_00203334 1 XLOC_124153 Coding TCONS_00203351 XLOC_124153 Coding Coding LIMCH1 6:61966848-62224344 j TSS152340 6000 1 TCONS_00203351_5 910 26 0.976799549505816 0.000460424525332669 0.000421285833628875 0.000381370526794395 0.00112928694531183 3.7225252864761e-05 4.40892683362321e-15 0.000180781207115497 7.31062646049078e-08 0.000120913340527417 1.18056993970097e-117 1.89771629390861e-28 1.5044943532915e-31 0.000141728722108308 2.02572945222394e-12 2.7438540969702e-14 1.7142860127267e-32 3.00612890642324e-24 1.21094208325332e-11 0.000860396624920717 0.000812829659082723 0.00024118566324135 9.6689364423848e-28 1.27388454216783e-33 9.00589113186409e-50 0.00145754462993003 2.4591448478402e-08 0.000452557243993652 1.12033704504553e-18 8.78940363423653e-132 6.12737410538112e-12 XM_005207880.1 LIMCH1 PREDICTED: Bos taurus LIM and calponin homology domains 1 (LIMCH1), 0.0 6882 100.00 0.635833333333333 NM_001112718.1 LIMCH1 Homo sapiens LIM and calponin homology domains 1 (LIMCH1), 0.0 4424 85.56 0.635333333333333 TCONS_00203351_5 sp|Q9UPQ0|LIMC1_HUMAN LIMC1_HUMAN LIM and calponin homology domains-containing protein 1; 0.0 1525 84.12 0.998901098901099 1 coding 1 1 1 1 -0.449286090812325 0.142400350423637 0.00669192738023697 0.899351629999982 AGTAACCGGCAGAAGTTTTGGTGATAAAGATTTTCGGACAGGATTAGAAAATGGAATCCTTCTCTGCGAGTTGCTGAATGCTATAAAGCCAGGACTTGTTAAAAAGATCAATAGATTGCCTACCCCCATTGCAGGATTGGACAATATCATATTATTCTTGAGAGGTTGTAAAGAGCTCGGCCTTAAAGAATCTCAGCTTTTTGACCCGAGTGACCTGCAGGATACGTCCAACAGAGTCGCAGTCAAGAGTCTTGACTATAGTAGGAAGCTGAAAAATGTACTAGTGACCATTTACTGGCTGGGCAAAGCGGCGAACAGCTGTGCCTCGTACAGTGGGACTACGCTGAACCTGAAGGAGTTTGAAGGCTTGCTGGCTCAGATGAGAAAGGAGACTGATGACATTGAGAGCCCTAAACGTAGTATTCGAGACAGTGGCTACATCGACTGCTGGGACTCCGAGCGCAGCGACTCCCTCTCTCCCCCTCGACACGGCAGAGATGATTCCTTCGACAGCCTGGATTCCTTTGGCTCCCGTTCCCGGCAGACTCCTTCGCCAGATGTAGTCCTCAGGGGAAGCAGTGATGGGAGGGGGAGCGACTCTGAATCCGACCTGCCCCATCGGAAGCTGCCTGATGTGAAGAAGGATGACATGTCTGCAAGGCGGACGTCCCACGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCCAACAAGAGCAACCAGACAGCCTACGTCCCCGCACCTCTGAGAAAGAAGAAGGCGGAGCGAGAGGAATATCGGAAGAGCTGGAGTACCGCCACCTCCCCCCTGGGTGGGGAGAGGCCCTTCAGGAGCACGAGTATGTTTGACATGCGGTGTGAGGAAGAGGCCGCGGTGCAGCCGCACAGCAGGGCCCGCCAGGAGCAGCTGCAACTGATAAACAGCCAGCTGCGGGAAGAGGATGACAAATGGCAGGATGACCTGGCTCGTTGGAAGAGCCGTAGAAGAAGTGCTTCTCAGGACTTAATCAGAAAAGAGGAAGAAAGGAAAAAGATGGAGAAGCTGCTGGCTGGAGAGGATGGGACAAGGGAACGAAGGAAAAGCATAAAAACCTACAGAGAAATCGTCCAAGAAAAAGAGCGGAGAGAAAGGGAGTTGCATGAAGCATACAAGAATGCACGGACCCAGGAGGAGGCAGAGGGTATCCTTCAGCAGTACATCGAGAGATTCACCATCAGTGAAGCTGTTCTTGAACGTTTGGAGATGCCAAAAATCCTGGAAAGAAGCCATTCAACAGAGCCAAACTTATCCCCCTTCCTCAGCGACCCCAACCCTATGAAATATCTGCGGCAACAGTCACTGCCTCCACCCAAGTTCACTGCCACTGTGGAAACCACCATCGCTCGTCCCAGCGTTCTGGATGCCAGCATGTCAGCAGGCAGTGGGTCTCCGAGCAAAACTGTCTCTCCCAAAGCAGTGCCTATGCTGACACCCAAGCCTTACTCCCAGCCCAAAAACTCTCAAGAGGTCCTGAAGACCTTCAAGGTCGATGGGAAAGTCACCATGAATGGAGAGACGACTCATGGTGATGAGGAGGAGAAGGAAAGAGAGTGTCCCACGGTGGCACTTGCCCCCTCGTTGACCAAATCCCAGATGTTTGAAGGTGAGGCCAGAGTGCATGGGTCCCCCGTGGAGCTGAAACAAGACAGCAACAGCATTGAAATCAACATAAAGAAGCCAAGTTCTCTTCCCCAAGAGCTGACAGCCACCACTGAAGAAACTGAAGCGAACAGTCGAGAAGATGAAAATGATGGTGAAGAAGCAGAAAAAGGGAATACAGAAGTTGCCCCATCAGAGCCACAGCTTTTTACAACAACTGTGACCAGATCCAGCCCAACCGTGGCCTTTGTGGAGCTTTCACCCAGCCCTCAGCTGAAGAATGAGGTGCCAGAAGAGAAAGAGCAGAAGAAGCCAGAAAATGAAATGAGTGGGAAGGTGGAGCTGGTGCTGTCACAAAAGGTGGTAAAGCCAAAATCTCCCGAGCCAGAGGCAACCCTGACATTTCCATTTCTAGACAAAATGCCTGAAACCAACCAGTCACCTTTGCCAAATCTCAATTCTCAAGAGTCGCCTGGCACTGCCAGCATTCCGCTGAGAGTTCAGAACTCTTGGCGACGTTCCCAGTTTTTCTCCCAGTCAGTGGATTCTCCAAGTAGTGAGAAGTCACCTGTAACTACACCTTTTAAGTTCTGGGCCTGGGACCCAGAAGAGGAGCGCAGACGACAGGAAAAATGGCAACAGGAGCAGGAGCGTTTGCTCCAGGAGAGATACCAGAAGGAGCAGGACAAGCTGAAAGAAGAGTGGGAAAAGGCCCAAAAGGAGGTGGAAGAAGAAGAACGCAGATACTATGAGGAGGAGCGGAAAATAATTGAGGACACTGTGGTTCCATTTACTGTTTCTTCAAGCTCTGCAGACCAGCTCTCTACATCTTCCTCTGTGACAGAAGGCAGTGGGACGGTGAATAAGATGGACTTGGAAAACTGTTGTGAAGAAGAACAAGAGACAAGACAGAGGAGACCACTCCAGGAGGATAACAGTGACTCACTGCTGAAGACTAGGGAAGGTGATCCACTGGAGGAGAAGGGCAGCCTAACTCAAGAGGTCTTGACTCATTCTGAGAACCCGGCATCAGAAGGAATCTACCACCAGCTGGATACAGAAGCTGGGGCCCCACAGTGTGGGGTAAACCCACAGCTAGCTCAGGATCCATCCCAGAATCAGCAGGTATCAAACCCACCAATGCACATTTTAGAAGATGTGAAGCCAAAAACCCTTCCATTGGACAAAAGCATTAACCATCAGATTGAGTCTCCGAGTGAAAGGCGGAAGTCTATAAGTGGGAAGAAGCTGTGCTCTTCGTGTGGGCTTCCACTGGGTAAAGGTGCTGCGATGATCATTGAGACCCTCAATCTCTATTTTCACATCCAGTGCTTTAAGTGTGGGATTTGTAAAGGTCAGCTTGGAGACGCCGTGAGTGGGACGGATGTTAGGATTCGAAATGGTCTTCTAAACTGTAATGACTGCTACATGCGATCCAGAAGTGCTGGCCAGCCCACAACATTGTGACGTGGTTTTCCAGCTTCCAGATCACTCACCGTTTCCTTACTGAGGGTGTCCCCTGGCAGCGTTTAACGAAATCCCGAGTTCAGGGGCTCCACAGCATTCATCTGATTTCTGAAAGGCTGTTTGAAAAGATGGTATCTGTTCTATTGTAGCACAGTGTTCATGTTTTTCCTGGTTTCCTTTCTTTTTTTTTTTTTTTTGGCATTTGCACAGTATATACAAAGAATATTGAATTGTAATGATCCTGAATAGTTCAAAAAGAAAAGGTCTTAGCATGGTCAAACAGGCTTATGGTTTAAAATATGTTATTCTCTTTTTTGGGAGTTAATGAGATAAATGATGCAATAAACCTGTTTGGTTTTTTTTTGTTTTTTTTTTTTAGCATTTCTAGGAATTAAACATTTTATGTTTACAGAATTGAGCTGCAGAAAATGCAGGACATGCCAATTTGAGACACATGGTCTTCTGAGTCAGGAGCATACAATTAATGCATTTCAGAAACTAAAAATCACACCATCTAGCTCTGAGCTATAACTTGTTTTTACTGCAGTCACTAGGCTGATAATATATACTGTAATCTTGAAACATTTGTGTTACTTACCTTTTGAGGTGGAAGTCATACCAATAAATTATTGCACCGTTAGTATTAGATTCTGTGTCCTTTGGAAATTATGCCATTGATATAGGCTGAACCATCGAATAGAAAGAACCCTTGTAATATTGGCTAGATTTACACTCTGGGACATTGCCCAAGGGTAGGAAGAAACCAGAGGGACATAATTCAGTCATTATTTCCAAAGTTACTACCAAAATCTGTGAAGACGTTTAATCTTCCAAAGAGTGGTGGGTCAGTGATAGCCAAGAGAGCTTTGTGGCTTGCTTCTCTTCATGCTCTAGATTCAATAAAAGGCTCAGTGTGGGACATATGGAAGCTGTCGTCGAGATCCGTACATTGCTAGGTGTGACCCTGCTCACCCTTGCCTGCACCTTCTCCTTGGGGGCTGAAGCCCAGGTGGCTAAAGAGAAGCACTGAGTCCATCCTAATAGAATCCAATGACGTACAATGCGAGAAGCCACTAGTGTGTGATCAGCAAGCACCTACCGCTCACATCGTCCCCTGCCCACCCCACGGGATACCTGCCTGCTCTCCTCCGCGCCATCCATCACCAACTCTCTCAACTTCTGGAACTCCAGAACCCAGAATTCTGGACCTTGCTCATGGAGAAGTTTAGCAAGGAACTCTTGTGGAGGGCTGGCTTATTTTTTTGCCCTGTGTGATGAGTTTCATCTGGCCAAGAAAGGAATCAAGTTACTAAAAAGCATCCCATTTTAGAGTTTCAGGCTGATTTCCTGAAGACTGGGGAAAGGGGGACTATTTATTCTGCCTTAAAATAATGGCAAATAAGTGAAGATGACAGATGACGTTTTGTGAATGTAGACTCTGGATATACTCCTAATAGCTTAACGTAGTCATAAAAGGAGATCAAGTAGATGTTTTTCTGTTATGTAAGCAATAATTTTTTTTTCTCTGTCTTATTGAGTATGGCTAGCAATTATTTATTTACATGCTAGACAGTTCTCTGCATGCGGGTTCCATGTAAGTGCAGAAATTTCCTCAGCCACTGGAGATAGTTTGGCCATTTTGTTATTTGGGCGAGCTGTTGTTAGATTGAAATTTACACATCATTTCATTAAAAATTGTGCCTTAGAAAATGCAAAGCTGTTGCACATAGTGATGAATTATGGATGCAGTACATTGAAGAGAGATGAAGTCACTTCCAAGTTCTCAAGACTTCTCATGGAGGTGTTGGCTGCTTTACAGGGGGAAAAAGTTTTAAAAAAAAAAGAAAAAGAAGAATTGAAAACATTTTGAAAATGTACAGATTAAGTCCAATATTTTGATTAACCACCTGCATGTTTTATTAAGTATTTTGATAATATGGATGTTTGCACTTTGCATGATATTAGAAGAGTACTTTACCACCAATAATGCACAAAACATGTACAATAGAATCATTCATAACCGATTTTTATAGAATACTTTTTACATGTGGAACTCCATCCGTTATGTAAGGATTATATGAATATTGCACATTCTCTTCTGGTTTCACAAACCCATTTATACATATTTCTTAGTGAGACTCATTGTACATGTATTGAAGCTAGAATCAAGTCAAGAAAAATAAAGCCCCATTCTCCAACTGCGAAATGTGCTTTTCCATAATGAACAATAGTCACCAGCACAGAATAATCTCCAACATTTTCTAAATTCTAATTGCCAACTGTTTCTATTTATATTTGATTTATATTTCATTTGGAGTCTGTTACATGGCAGCTCGGGCAGACTAGATCTTGTTTTTTCCAATGCAGCATAATGAGTATGATCTATTTCTTTTCAAATAATCTCTGAGATCCCAGGAAAAAAAATGCTGTGCTCCGTTGAGCTACAATGTAAATGTGTTTGTTTAAAAAACAGATGAGGCAAGTGAGTGATTTATTGTTCCTGAGGAAGTATATCTTTTTTTTCTTATACTTCGAAAGCTAGTCTCTTCTTTCTTAAGAAAAAAAAAAAGTGGGTAACTCTTTGTTTTTCACGTGCAAACTTTCATGACGTGTTCATTCTTTCTGTGTAGTGTTATTAATGCAATACCTACTATAGTTATCTATACACAATGTAAGACTTAACAAGCTGAAATGATCCACCTCATATGTGAGTCCGTCCAAAAGATGTTACTATTCTGGGTGGGCCAATGTTCTGTATCAGTTACACTAACCTTCATTTAAAATATTTATTCTAAAATGACTCTGAGAAATAGTAAAAAAATAAAGTTGTTTAAAACGCAACAGCTTTTATAGTAAATGTACATTTATAAATAAAATACTCAAATTCA EMBV3_43000 CTCTGAGTGCTCTCGTCCCCAGTCCGTCCTTCATGGCAGGACAGAGAACAGAGGCTCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08133 TGCCCGGGCCGTGGCTGTCGCAGCCCTGAACAGTTGCTGATCCAAGAAAACCATGCTTTT Gene BVT0102_249765 + 0 NULL GK000015.2:64477078-64480781 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059812 TCONS_00059813 TCONS_00059814 1 XLOC_036520 Coding TCONS_00059814 XLOC_036520 Coding Coding TCP11L1 15:64478429-64514494 j TSS44807 7868 1 TCONS_00059814_6 509 0.110320284697509 10 0.78210958296362 0.000681147702464393 2.03118370474555e-08 0.000621728741408557 0.000335315576339304 0.000309941537088775 0.000145508834634155 8.68417734595521e-05 0.000278884536465838 0.000554435861846338 2.7703144185259e-09 8.71757708737576e-40 5.07875778862182e-21 2.68819966062223e-05 8.86304840127855e-06 6.74915939969241e-05 6.5456507582684e-09 6.32476373283564e-42 2.31419037821862e-08 0.000918422795483351 0.000559771002027355 5.42933044364214e-05 1.53111423260152e-05 1.18645305581795e-31 9.21194539176882e-06 0.00146984801847387 0.000685712756639473 0.000820077859843634 2.46444522890081e-11 4.70244913223765e-49 5.0388840097809e-05 XM_005216273.1 TCP11L1 PREDICTED: Bos taurus t-complex 11 (mouse)-like 1 (TCP11L1), 0.0 9512 100.00 0.670183019827148 NM_018393.3 TCP11L1 Homo sapiens t-complex 11, testis-specific-like 1 (TCP11L1), 0.0 2385 84.54 0.271733604473818 TCONS_00059814_6 sp|Q9NUJ3|T11L1_HUMAN T11L1_HUMAN T-complex protein 11-like protein 1; 0.0 900 87.03 0.99803536345776 1 coding 1 1 1 0 0.0420233166262376 0.797871364382984 0.00832029418501071 0.878741599121506 GTGATGTGTATTTTGCTTTGTTGCATAGGCAGGAAAGGAAGGCAGCTCTCTACAGTGAAGTGAAAGAGAAAACAGTTCATGATTTGAGTGAGGAAGTTTTTAGAAACAAACTACTTAAAATGTGGTGAGACCACAGCTGACGGAGCAACAGTGTGTGTACTTCCTGATTTGCAACTTTTATTTTGCACATAATGGAATAAACATCATTATTTGGCAACAAAACTAACAGCTCTCCTTCAGGGGAAGACAGAATTTTTTAGTTATATTCATGGTCCTAGAAGCAGCAGCATTCTAATACAATGTTAATTTCATGGACAATCTAGTAAAACCACAGTTTACCTCAAACTTCATAAGCGTAAAGTTTTAAGAAAATTGGTCATGTTTATGGTAAGCCCTGATCTGAAGGGCTTCCCTTGCTCAGCTGGTAAAGAATCTGCCTGCAATGTGGGGAACCTGGGTTTGATCCCTGGGTTGGAAGATCCCCTGGAGAAGGGAACAGCTAATTTAGAGACTATGGTATATTGGAAGGACTGATGCTGAAGTTCCAATACTTTGGCCACTTGATGTGAAGAGCTGACTCATTGAAAAAGACCCTGATGCTGGGAAAGATCGAAGGCAAAAGGAGAAGGGGTGGCAGAGGATGCAATGATTATATAGCATTACCGACTAATGGACATGAATTGAGCAAACTCTGGGAGATAGTGGAGGACAGAGAGGCCTGGCATGGTGCTGTCCAAGGGGTCATAGAGAGTCACCTTAGCAACTTAACATCAACACCAAAAAGTATATTCGTCTAGACTCTGAAGTGAGAACTGAATGTTTTCTTCCTAAATCTTAGTTCCAGTTAATATCTTATGGCACCCCCCTCCCCCCTCAAAGTGAATCCTCTTCTGAGAACTGTGTTTCAGGAAAAATTCTTACTTTAACGTAGGAATAACTGCCCATGTGTGATCTATTTAGAAGTGGCATTTGAAAGCAACTCCTAATTCCACTCCAGCTTGTTTTGTTCTAGTTATTTAACAAGTTTATAGGCTTCAGGTAAGAGGCTTGATTGTTACCTTCATTTTAAGGCACACATGTTTGATGTTCATTCTTAAAGCATTTTTCAAAAGAACAGATAAAAGTTATGAACTTTTACTTTTGAAGATAGACCCCTCACAACGATTTCTATTCGTGTAGTTTGCTGTCTTACTATACAGGCTGAGAAAAGCATGGTTTTCTTGGATCAGCAACTGTTCAGGGCTGCGACAGCCACGGCCCGGGCACCTGAGACAAAGGGGAAGGAGGCTTCAGAACAAGCTTGTCTTAACACGGTGTGTTTACTTTCTAGAATACATATGGCACATAAAATGCTGAGTGCTGTGTTTCTGAGCTCTCTAAACCGAGTTGAACCCTCGTGAGACGTCTTTGCCTCCTTGCCTTCCATCTTTTCAGGGCGAAGATCTCGCTCTTGCCGTCGACACAGTAGCGACCGCTTAGATAAAAGAGATGACTCAAACCAAATCGAATCTGTGCCGTTAAAATGAAATTTGGCCATCCCGGTGGTGGGCATGACTTTTTTTTTTTAACAACCAAAAACGAGGGGAGGGGAACAAATAACGTGGCTGTAAACCATGATGTAATATTTAAATTTGAAAACCAGGACGGGGAAGGCTTTGCACCGAAACAGCCAATCCTTTCGCCTTCCTCGACTGCCTCCGCGCCGCCTGCCCCGCAGCCCGTTTTTCCGTACAGAAACATGGCGCCGCCTTCTCTGGGGCGGGGGCCTCCCGGCTCCGAGTCACAGCCCACTGGGCCCCCGCAGCTGGCACCCGGCCGCACCTCCCGCCTTTCCGTAAGGGAACATGGCGACGCCCTACGTGGGACAGGCGCCTCCCGGCTGAGCGCTTCCTCCCGCTACCCGACACTGAGGAGCCGCCGCGCTGGCCGCTACCCACCCGAGCCCGGCGGGGAGGACCGCTCGCAGCGCAGCGAGGGATGCGGCCTCCGGGGGGCAGAGGTTGAACCGGCCCTTCCCGCCGCGCATCCTCCCCGCCTCCGCCGCCGCCAGATCCCCGGCCGAGCGGCAGGAGGGAAGACGCCCACTCCGGAGCAGGAAAGTGAATGAACTTAATTGAGAATGTCTGAAAACCTTGACAAGTCCAATATAAACGAAGCAGGAAAATCAAAATCAAGTGATTCTGAGCAAGGCCTTGAAGATGCTGTGGAAGTTTCTGATGAAGCTTTACAGAAAAAAATCAAGTCGGGCTCTCCAAGCACCCAAAGAGTGCAAAGACCTCACTCTAGTCCTCCTCGATTCGTGACAGTAGAAGAACTTCTAGAGACAGCGAAAGGAGTCACTAACATGGCCCTAGCCCATGAGATTGTTATAAATGGAGACTTTCAGATTAAACCCGTTGAGTTACCAGAAGACAGCTTGGAGAAGAGAGTAAAGGATATTGTCCATAAAGCTTTTTGGGATTGCTTGAGTGTCCAGCTAAGTGAAGTCCCCCCAACGTATGACCGGGCCATCAAGCTTGTTGGTGAGATCAAAGAGACTCTCCTGTCTTTCTTGCTGCCTGGTCACACTAGACTGAGAAACCAGATAACAGAAGTCTTGGACCTGGATCTGATAAAGCAGGAGGCCGAGAACGGGGCCCTGGACATTTCTAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCGCCTGTGCGAGATGAGGAAGTGAAGAAACTAAAGGACATTAAGGAGATCGTGCCCCTTTTCAGGGCGATTTTTTCAGTGTTGGACCTAATGAAGGTGGACATGGCGAACTTTGCTGTCAGTAGCATTAGGCCGCATCTCATGCAGCAGTCGATTGAGTATGAAAGGAAGCAGTTTCAGGAGTTCTTGGAGAAGCAGCCAAATTCCCTGGACTTTGTCACCCAGTGGCTGCAGGAAGCCACAGATGACCTTATGAGTCAGAAGTATAAAAACGCGCTGCCAGCTGCGGGAGGGGCCGCCGGCTCTGGGGACGGTCCCCAGCTGGATCCCGTGGCCGTGCAGAATTACGCGTACCTGAAGCTTCTGAAGTGGGACCACCTCCACCGGCCTTTCCCTGAAACAGTTTTGATGGACCATTCTCGCTTCCAAGAGTTCCAGCTCCAGCTGGAGCAGCTGACCGTCCTGGGGGCCGTGTTGCTGGTCACGTTCAGCATGGCAGCCCCAGGGATCGCCAGCCGGGCTGACTTCGCTGAGAAACTCAAGATGATTGTAAAGATTCTGCTCACAGACATGCATCTGCCCTCCTTCCACCTGGAGGACGCCCTGACTGCTGTCGGGGAGAAGGTCTGCCTGGAGGTGAGCAGCTGCCTTTCCCTGTGCGGCCTCAGCCCCCTCACCACAGACAAGGAGGCCGTGCTCAAGGGTCAGATCCAGGCCGTGGCCAGTCCTGACAACCCCATCCGCAGGATCGTGGATTCCCGAATCCTGACCTTCTTAGACGCCTACCTTGCCTCAAGTCATCAGAAGCCATCGCCCATAGCCCCTGGGGGATTGGGTCCGATTCAAAAAGAGCTGGAGGAAGTTGCCGTTAAATTCGTGCGCCTGGTCAACTATAACAAGATGGTGTTCAGTCCCTACTATGACGCCATCCTCAGTAAGACCCTCGCCAGATCCTAACACGTATAGTCCCTGTAGCAGCAGTATTACTTGCTCAACCTGTTCTCAGCTGTGATGTGGCTTTGGAAAATGGCTATTTAGTACATTTCTGTTTAATAGCACAGATTCCAAAAGGAAGAATATTGTGTATCAATGTTGAGAAGACTTGTTGGAAAATGCACTGAATTCTCTTTTGGGGGTTTGTATTTATGAGCGCAAGTTTACATCAGAGAGGCTGTTGTCCTGAGTTTCATAGGCAGCACTCAGCTTTTAACAGGACTGTCCTGTGTATATCACGGTTGTAGCTGCCTGTCTCTCCCTCAAGTCTGGGACTGCTCTTCTGCCATCTGGGTTGTTTTTCTTTTAGACACCCGAGAGTATCTGCCAGCTACCCCAGAGTGAGAAGCCAAGCCGTGGTGCATTTAGACGCGCCCCTCTCTTGCACAGCCCACCCCTCCTCCCTCCAGGTATTTAAGTTAGAACTTTATAAATCTTACTGCCTCCCGTCTGCCCCCCTCGACCCCCAGTTATTTATTGCTTTCTCCCCTCCTGGCCCAGCCAGAGCCCTGGAATCCTTTCATTCTGGAGGAGTTATTAATACTTGATTTAAAAAAGCTTTCTCTTTTGTACAAAATTACTTCTGAACCTGGATGATAGTGTTTATGGGATGTAGAGAAAGGAAAATTCTTTGATTTTTATGTCTTGAAAGTTGAGGAATCTTTAAAAAAAATATGCTAGTGTAATATAAAAGAAGACAGATATCGGAAGTTTTTACTGAAAAGTTCACCCTGATACAACACCTTGAGGTATTGACTGAATTCGAATTCCAGAATTGGATTTAAGTGTTTTCAGATAAAATAGCATAAGCTCACTTACTTCTCAGGTAATGAAGTTATAGGAAATCTCTGATTTTCGAGCAGTATTTATCTAGGAACTTGAGTGACCAGAGTTCCTGACATACCCTGTGGCTGAAAGGGTAGCTTGGGGTCTCATAGATGACCTGTTTTGTTAAAGAATAAATGTGTATCTTAGGGATGTTATGTGAGAAACCGAACTGTGAAGTCATTGGGGTGATCCCCAGCTGCCAGAACCACAGGGGTGGCGTCAGGCAAGGAATCCCTTCATTCAAGCCCATAAGGGTGGGGGTGGAGCTGAGGACAGGGTTGGGGAAACATCCACCCTGTGGACCATCTAGTGATACCAGGTTCCAGAGGAGCTACTGGTTATACTGGGAGGGATGTGATTTCTCCATCTATTTGCTTCAGACTGCACTCTTAATATTTTTACTTGCAGTCAGAAATGTAAGCTGGGTTCCATGGTCAGACGTCATATTAATAAAGTTTAGTCTCAAGGACAAATCCTCCCTGGTTTCCTGGGAAGAGGTTAAAAGCTCAGTAAGTAGAACTTTTAAAGAACAAAACCACATCCTCTGTAGCGCGTTCAGTGAAGTCACCTCTGGAATTGTTCCTGGAGGTCAGGCTGCCGTGGCAGCTGCGCTCACTGGTCGTAGAGAATGAGGTTCAGTGGGCAGGGCGGGGGGGCACTCTGGCTTGCTTCCACCTCAGTGTTCAGGGGTTCCCCACCCCATCCAAGGATGTAGGAAAGGGGTGTAACCCCCCGATGCAGGGCGAGTCACCACCTCCTGTAGCCATTTTCCCTAAATCTCCAGAGTTCTTCATTCTGCTTCTTTTGCAAGAATTAACTCTTAGTAGATTTTTTTCCCCCTCATGGGTTCCTACATGGATAGAGTGATGTTTGGACAGTTTGAAATCTTGATGCCCATGTAACAGGGAGCTTCACAGACTCCTGTGGCCCCCACTACCTCAGTGTCCCCTGGTGGAATTCTACAAGAGCCAGAATGAAGACAGTAAAGTTCAGAATCATGATATTCATATTGAATCGTTTTGCTGTTGCTCTTTGAAGATATGTGAGCTAGTTTTTCTTCCTGGAATCTCATAGGATTATCACTAAGGGCTAGGAAGATTTGTTTATTTAGTCACTCAGGAAATGTTTGCTAAGCATCTACTTAGAGCTCCCCCAATCCAGGGTATTCTGTCCCTCCAAGACAAAATACCTTTGGCATATAAATTATCCTTCAGAATTGAACTGGTTTTATATATATACTGCATGCTGGTTGGATTTGACATGGTTTCCTGCCCAAAAGGGTTTGTGGAAAACATATCTTTCTGGAAGTGCTAAGTTTATTTGGCAATAGTACTTCACTACAAGTGGGTAGAACTGAGGGCCTTGAGAGCTGGGTTGCGATCAGCAGGTCAGCTTGATTTCTCTGATAGTTTCCTAAATGAATGAGTGAGTGAATAAAGGTCTAGAAGTCAGCTGTCAGTTGATGAGGTGACTAGTGGGTGGCGTCTCACTGTATGAAGTTTTCTTTTTTTAATCTCGTTAATTCTAAAGCAAGCTGTAAAATGTGATTGTTCATGTAATGTAACCCTATAATCCACTTCAGGTAAGAGTTACACTGATATATCTTACTGATTAATGCAGTGGACAGGTATATAGAAACTTTTTCTCTATGAAGAAAAGTTATTAAAAAGTTTGACTCAATAGGCATAAAACGTGCACATTACTGGCTGACAGTTCTGAATGGCTTATTTAGCAGTTCTGTTTTTGTGGCTTATTTTAATTTCTCCAAAGTCTTAAGATTCCTGGGAAGAGAGCAGCCTCATTTCCTGCTGAATTTCAAGGGAGTGAATAGGTGTTTGCTGTTTGACTTCCAGTGATCTTTTGACTTGCCTTGACTTGTATGTAAAGCACTTGTATTTCTTTTGAGGCAGAACGGTAGAGTGGGAGGACTGAGAGCTGTCAGGAAACCAGAGCTCTAATCCCATTTCTGTCATGTGATTAGCTGGAGCAAATCGGGACCCATTTCAGTACCCATAGAATGAATGGACTAGAAAAGGGCCTTTCAAGTCTGACATTCTGTGATGAATTTGACTGGAATAACTGAAGTAGACTGCGGTCAGATTGTGCAGAGAGATCTGACTTAGAGGAAGATCTGGGTTGAGTCGTTCCTCTGTTGCCTTCTTGCAAGGAAGGCTCTGTGACTTTGGGCCATTCTTCCTTAGGCTTTGTAAAACAAGAATACTAATTCACACTTCCTGTGAGGATTAAATTTGATAATGGATATTAGAATGCTTTGTACACACAAAAGAACTATAAATGGCTTTATTAGCAACAAAGGAGAGTATTGTAACCTTTTTGCCTGTAGGTGATGACAGATTTGACTGCAGGTGCCCAGCCTCCTTCAGTCAAGCACGTTTTACAGGCCTGTAGGGAAGGTTTTCCTCCTGTCCTGTCCCAAGACTGTTATTTTCTTTTATCATCTCTTCTGTACCAGAGCTGCAATCTTACTTCTCTTATATGCTGCCACTCACCTGCACTCCAGTGATTTCTCACTTCCACCTCCGCATTATTTGAAGTAAATGAATGGATGACTGAATGGTAGTGGATGATAGGCTATGAAACTCATATTAAAAGGCACTATCTCATTGAAAACCTAAATAAAGAATTACAGTGATGTTTGCAATTGTGTATTTATATTGGGTTTTATATACCTATTTTAATGGTTTGCCTTTTTATTCATTTTTCAAAGCACCTTCATGGGACGGGGAAAGGGGAAACTTTTAAGCCTGAAATCCTCTATTAACCTACTGAATGTTCACTGATACTTTCAGAAAAAGCTCGAGTCCTAGAAATGTGTCAGAAACTTCAGCAGGCAGAATTTTACCTAAAACTGCCTTTAGTGTGGATTTCTGTCTTACCTATGTTGCCTTCTGAACTAACATATAGTTTAGAAGGCCCGATCTGATGGAATGTAATTTAGAAATCAGTTGTGTCTGACGTTGGTATCAATAGTCAGACTTCACCATTTTTCTATTTGTTTTATCTGAACTAAGCCTAGCTTCCCTGGTGGCTCAGGTGGTAAAGAACCTGCCTGCAATGCAGGAGACATGGGTTTGATCCCTGGGTAGGGAGAAGGAAATGGCAACTCACTCCAGTATTCTAACCTAGGAAAATCCCATGGACAGAGAGCCTGGCACGGGCTACATGGGATACATGGGGTCACACAGAGTCAGACGTGACTTAGTGACTAAACAACACCCCATCTGAGCTAAACATTGAGAGCCTTTAAGTGCAACTTTTGACTTAAAGCAGCCTTAAAATCAAAGTAACACTTTTTTTCCTTTCTCATTCTCATTGCCTCTGCTTTCTGAAGTAC EMBV3_05487 TGGGTAACCGCACTTTTCCAAAGATGCTCTACTGCAACTGGACCGGGGGATACAAGTGGT Gene GeneID:512588|TM2D3:NM_001040518:70_cdna Constitutive 1 NULL GeneID:512588 21 GENE TM2D3 MGC133994 TM2 domain containing 3 EMBV3_28559 CAGCTTCACATTCACTCTCCCGTTCTGCAGCTCCAACCACATCGACCACTTCTTCTGTGA Gene GeneID:615009|LOC615009:XM_002686603:90_cdna Constitutive 0 NULL GeneID:615009 3 GENE LOC615009 NULL similar to olfactory receptor Olr1346 EMBV3_21056 GTTTCTCTATTGTCCCGAGGTTAAGTGACCGGCCTGGAGCACACAGTGATGAAGCTCAGC Gene BVV0102_151879 - 0 NULL GK000019.2:34861404-34878436 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21256 GGTTTACTGGGTCATTGGCTGATTAGGTAGAGGTTTTCATTAAGGGGACACGTGCTGCGG Gene BVT0102_443822 + 1 EMBV3_08316 GK000009.2:75519233-75549282 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04599 CAACCAGGCTGAGTTCCCTCTCTTCAGCGTCTTTGTTTAGAAGGCTCCATGTCCCATCAT Gene GeneID:519239|LANCL3:XM_002700228:203_cdna Constitutive 0 NULL GeneID:519239 X GENE LANCL3 NULL LanC lantibiotic synthetase component C-like 3 (bacterial) EMBV3_22368 CCTACGAGAGCTACAGGAAGAAGGACTACACGCAGGTGGACTATCTCATCAACGGCATGT Gene GeneID:509055|MGC139603:NM_001075388:554_cdna Constitutive 0 NULL GeneID:509055 29 GENE MGC139603 NULL hypothetical LOC509055 EMBV3_38627 GGGACATTTAACCTGGAGAAAGGGCATTAAGAGCAAGTGCAAGGGCCCAGAGGTGGGAAT Gene BVT0102_004772 - 1 EMBV3_32170 GK000007.2:21585663-21593839 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212445 TCONS_00212448 TCONS_00212449 1 XLOC_130183 NonCoding TCONS_00212449 XLOC_130183 NonCoding NonCoding - 7:21585714-21586931 - TSS159415 875 3 TCONS_00212449_1 72 0.142857142857143 2 0.282072368421053 1.3433398868489e-07 0.000101418175642329 1.0573733812391e-05 2.84693139698414e-05 0.00143883397413667 5.34347212219817e-05 0.000133294674769809 0.000444450610255988 7.41188330906672e-05 0 6.34476849246617e-12 7.10574323881561e-18 8.62483838761967e-67 8.55663530583769e-53 0 0.00169033705615415 0 0.000114695745099856 0.000565476742321369 0.000136297905871976 0 0.000302633003067923 6.63158920973466e-05 0.000574784043282764 0.000154543316132296 0.00071897789634258 0.000308021734056319 1.2061355877054e-09 0 7.36384131058867e-11 XR_231644.1 LOC100849681 PREDICTED: Bos taurus uncharacterized LOC100849681 (LOC100849681), 0.0 1085 99.83 0.689142857142857 0 noncoding 1 1 1 1 0.0568962464854085 0.587120158749149 -0.0137822485768419 0.830448024581526 TGCTAATAACGACTCGGCGAGCGATCGGATTGGGTATACCCATCCCCTGGGGCGTGACCATGCAGATACAGGTCGGCGCGCCCGTTGGTGATTGGCTGCGGTAGCCACTGAGCCGCGTGGGAGCCCCCAACAGGGCCGTGCCCCACCCTGCATGCAAGAGCTTCTCTCCCTCCTGTGAAAGGGCCTCAGCTTTCTCTCCTATGCAATGGAAGCTTTGCACAGAGTCCACGTCCAGAAGGCCGGATGCAGCAAAGCTGAGACCAGGAGCTGGGCTCGAAGCAACTAAGAAGAATGTGGTGGGGACAAGAAAGCTGCGAGGATCTCGTGAAGATGAAGGGCCAGGAGACCCTGCTCTGGAGTCTTGGGGACCCCCAGGCAGCAGCCTGGTCCTCTTACAGCCTGGACTGTGTTTCCTCTGACCCCAGGATAATTGTGGTCACTGGATGCTCCTGATGGCCCGTTAGACCCCAAACAATCTACCCACAGCACCTTCCTGCTCTCGCCTCCCTTCATTTTCCTCCTCACTTACTCTGGCGACCTCAACGTTCCTTAGATATGTCCATTTCATTTATTCCCACCTCTGGGCCCTTGCACTTGCTCTTAATGCCCTTTCTCCAGGTTAAATGTCCCCCTTTCCAGTGAGACATTCCCAGGCTTGTACCCCACCCCAAACACCCCATCTTATCTTTGCTCCATATGTTCATTTCCTCCCTATAAGCTGCCTGTTTGCTCATTGCTATATTGCCAGCACCCAGAACAGTGCCCACAGGTGCTGTCAATGCATATATATTAAATAAACAAATAAATGTATAATGTAAATTTCTAACAGGCAGGTGCAGCAGCTTTGGAAAGCAGTCTGGCAGTTCTTCAAAAGG TCONS_00216017 r 5' 27 TCONS_00216017 r 5' 27 EMBV3_37197 GAGCGAAGGGGCTTTGTGAGAAGTGAGAATTCCTGGGAGCAGGTTCAGCAAGGAGGTTTA Gene BVT0102_180814 + 0 NULL GK000025.2:27440675-27443124 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146736 1 XLOC_089193 Coding TCONS_00146736 XLOC_089193 Coding Coding ZNF668 25:27429304-27443140 = TSS109638 7249 1 TCONS_00146736_10 619 0.177817630017933 3 0.476255872786411 0.000169162204695371 0.00024648840311829 0.000172999085238963 0.00010879723385869 0.000121316335897849 7.41408088985339e-05 0.000163123154781784 3.08444984625168e-05 0.000249563422894595 0.00037418025330569 2.31386055087756e-05 2.03775777080994e-05 2.02984022319843e-05 0.000174422294353838 1.89436689234547e-05 8.66692472410877e-05 4.16387864986177e-05 1.31279176368927e-259 0.000122031825758862 0.000254380760522626 6.47133805302447e-05 0.000119071074863465 0.000189455201669557 3.67824744238514e-05 0.000285572575303979 0.000120787141621989 6.43452738922732e-05 8.06849408035129e-05 8.116380088975e-05 0.000238925946246411 XM_005224964.1 ZNF668 PREDICTED: Bos taurus zinc finger protein 668 (ZNF668), transcript 0.0 5157 100.00 0.394261277417575 NM_024706.4 ZNF668 Homo sapiens zinc finger protein 668 (ZNF668), transcript variant 0.0 2814 82.64 0.377845220030349 TCONS_00146736_10 sp|Q2TA17|ZN668_BOVIN ZN668_BOVIN Zinc finger protein 668; 0.0 1248 100.00 0.998384491114701 0 coding 0 0 0 0 -0.166443871383212 0.303945611698794 -0.00410550375274057 0.945099640708072 TGGGCGTGTCCTCCATGGGGCAGTGTGGCAGAAACCTGGAGGTTCAGGAAGAGCAGGCAAATGGCAGCAGCATCTTCCTCTGATGGAGGGTCCAAGGCCTAGGAAAAGGGGGCAGTGGTCAGAAGGAAGGCGTGAATTAACTTTGCCTCTTGATTTTATGAGCAGCAAGTTCACCAGAGGTCACAGTTACCCCCAAGTAGCAATGCCCAGAGACCTGCTCTCTACTAGATCTATTCTGGAAATACCATTTAAAATTTCTCTGAATACAGGTTCCCCAAATATGAAAGCTCCCCTAGGCCTAACTCATCTCTAGAAGTATAATAAGGAAACTAACATCTAAAGAATTGCATCCCATCTCTAATCACAAACATATTATCCTGCCTTCAGACCAAGTCCCAAAAATCTTACTGTCCCTAACCCTCTACTCTATAATTTTGAAACAAACAACCTATCTTACATGACATCTTAAAAGGAAACTTGTACCTCTCTTAGGACCTTCAATAAGATAAGTCCAATCTTCTATCTTTCACCCCTCAGCTAAATAGAGTAGCTTAGAGGCACTCAAAGGGGCTTCCCTGGTGGCTCAGACAGTAAAGAATCTGCCTGCAATGCAGGAGACCCAGATTCAATTCCTAGGTCAGGAAGATCCCTGGAAAAGGGAATGGCAACCCACTCTAGTATCCCTGCCTGGAGAATCCCATGCAGAGAAGTATGGTTGGCTACAGTCCATAGAGTCACAAAGTCGGACAAAACTGAGCAACTCTCATAGAGAGGCACTGAAAAAGCAGCCTCTTTCTCCAATAGACAGGCTAGGACCTGAGAAGTGAGGTTAGAGGCCTCCTACAGAGAAAAGGGCTGATTTGTTCCCCCTTCTGCCCTATTCCTTTCAGGGTCACAAAATCTCCTTTCTGAAAGACTCTCTTGGGTTCCCCGGATTCCAAACCATCTTCTATCTTGGAAATCCCATCTCCTTTCTGGTACTTCGCCCCCTACCTTTTTCTTTCCCACTATTTATCACTTTTCTCTCTCCATCCCTTCTCGTTTTTCCTTCTACCTTCTCTCTTAATATTGATGACAACAGCTACCCGTACAGCCTAAGCACTACCATGTGCTAGGCCCTGTGCTAAATAAAGAAAATTCGTTGTGTCACCTAATTCTCACAACTCATTACAATGCCTCTATTATTCCAGTTGACACACGAGGAAGCCCATTCACTCAATCTTCTTTCCAAAGCCCTTACTCTATAGCAGGCCCCCGTGCCTCCTATATCACCTTGGCCTTCTCTGACTCGGACTCTTCCCCCTCGCCGGGGGCCCCCATACAACTCCTATCTCCGACTTTAAACCTCCTTGCTGAACCTGCTCCCAGGAATTCTCACTTCTCACAAAGCCCCTTCGCTCGAGTCTCCTCTCCGAATCAACTACCAAAGAGGTCCTCTCGCCTCATTCATCTCTTCAGCCAGTTTTCTCTTAGGACCCCTACCTCACACCGGTGGCCCCTTCTCGTTCCCGCCGCGGGTGCGTCCGTTGGGGACCGCGAACGGGAGTGCGCCTGCGCAATGGGACCCTCACCCTAACTGCAGCCGCGCGCCCCAAAGGGTGGTTGTGCGAGGACTCTCGCGCTCCCACACACGCACACTCTGCAAGGGCTCAAGGAAGTGGAAGAGGAGGGAAAGAGGGAAAGGAGAGGGGGGAAAGGAAGGAGGTAGAGGAAAAAGGGCGCAGCTGGCACTAACCAGCGGTCTATCGCCCAGCTCCGCGGACACTTCCTATTGTTACTAGGAAACAGGAAGTGTCCTAGCCTCAAAAGCTTCCCCACGAAACTTCCGCCTTAAAAATGCTTCTGACCCGCCTCCAAGCAGCGGTTATACAGACACATTTCCGGTGCTAGGAGAGCGGCAACTAACGCGCGACTCCGACCCCGCCCACGTAGGTCAAAGAGCTCGTTGTTCTGCACTAACCTTAGCCACACTTCCGGGAAGATCCGCTAAAATCGTTCCGGTGCATATTGACTGAGCGCAGAAGAGGGGGAAAAAGCGTTCTGCAGCCCTGACCTCAGTACTTGGGCGACACTTATCGTGGGGCTCCCTGAAAAACTTCTCAAGCCAGATGGAGGGAGCGTCACTTACTGCTTTCTATTAAGGGAAATGTTATGGAATATAAGCGGATTTAGGTACTACAAATCTTGGGCATGGCCTTTCTGTCCTCCCACCTTCCAGTTCACGGTGATCTAGCGCCACGCTAGCAATAGTCGGTGCATCCCGTAAACCTATTCCCGTGTCCCTTGTCATTAGCACCCAGAAAGACCCCTTGCAAGGTGTTTCTCCGCCACCTTCTCTTGGGGCTGCTCCGGTGAACTCTGTCTTCCTCCCTTGCCGGGAAAGCTCTCTCTCACTTCCGTTCGCCGGCCCCGCCTCCTGTCCCTCCCCTTCTTCCCTCCCCCAAACCGCCTCCCCCCCCCCCCCCCGCTGGGTCCTAGCGCCTGCCCCTCCCTGGCAGAGTCCTGGGCTCTGTCGGTGAGAGGAGCTGCAGCTGACGCCACGGAGCCAGCCCAACTCTCTTGAGAGAAGATCCGCCCATCGAGGCCATGGAGGTAGAGTCTCCGGAGGAGCGGTCCCCAGCCCCGGGCTACAAGCGCTCTGGCCGCCGCTATAAGTGCCTGTCCTGTACCAAGACTTTTCCAAATGCACCCCGGGCAGCACGCCATGCTGCCACGCACGGGCTTGCAGACTGCACTGAGGAGATGGCCGAAGCGAAGCTGAAGCCAGAGACAGACCCCAAAGCGGAAGATGCCAGCGGGGACAAGGTGTCAGGTGCAGCGGCCAAGCCTCGGCCCTATGCTTGCCCGCTGTGCCCCAAGGCCTACAAAACAGCACCAGAGCTGCGCAGCCACGGGCGCAGCCACACGGGCGAGAAGCCCTTCCCTTGCCCCGAATGCGGCCGCCGCTTCATGCAACCGGTGTGCCTGCGCGTGCACCTGGCCTCGCACGCTGGCGAGCTGCCCTTCCGCTGTGCGCACTGCCCCAAGGCCTACGGCGCGCTCTCCAAGCTAAAGATCCACCAGCGTGGTCACACGGGCGAGAGGCCCTACACCTGCGCCGACTGTGGCAAGAGCTTCGCTGACCCCTCGGTGTTCCGCAAACACCGGCGCACGCACGCAGGCCTGCGACCCTACAGCTGCGAGCGCTGTGGCAAGGCCTATGCAGAACTCAAGGACCTTCGCAACCATGAACGGTCCCACACCGGCGAGCGCCCCTTCCTCTGTTCAGAGTGCGGGAAGAGCTTCTCCCGCTCTTCCTCGCTGACTTGCCACCAGCGCATCCATGCGGCGCAGAAGCCCTACCGCTGTCCAGCCTGTGGCAAGGGGTTTACGCAGCTCAGTTCCTACCAGAGCCACGAGCGCACGCACTCAGGCGAGAAGCCCTTCCTGTGCCCGCGCTGTGGCCGCATGTTCTCCGACCCCTCAAGCTTCCGGCGCCACCAGCGGGCACACGAGGGCGTGAAGCCCTACCGCTGCGAGAAGTGCGGCAAGGACTTTCGGCAGCCGGCTGACCTGGCCATGCATCGGCGGGTGCACACGGGCGACCGACCGTTCAAGTGCCTGCAGTGTGACAAGACATTCGTGGCATCCTGGGACCTCAAGCGGCACGCGCTGGTGCACTCGGGCCAGCGGCCATTCCGCTGCGAGGAGTGCGGGCGAGCCTTCGCCGAGCGAGCCAGCCTTACTAAGCACAGCCGGGTGCACTCGGGTGAGCGCCCCTTCCACTGCAATGCCTGCGGAAAGTCCTTCGTGGTCTCATCCAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGCGAGGCCACAGGGGCTCCCCCACAACAGGAGCTGGTGGTGGGGCTGGCACTACCGGTCAGCATGGCTGGCGAGGGCCCAGCCGCCCCAGCATCAGGGGCGGCGCTCGGAGACCCTCCAGCTGGGCTGCTGGGGCTGCCCTCGGAATCGGGTGGTGTGATGGCTACCCAGTGGCAAGTGGTGGGCATGACGGTGGAGCACGTGGAGTGCCAAGATGCAGGGGTTGGTGAGGCTCCTGGTCCCTTGGGGGCGGCAGGTGAGGTGGGGGGTGAGGAGGTGGATGAGAAACCACCCCAGTTTGTGTGCCGGGAGTGCAAGGAGACGTTCTCTACGCTGACATTGCTGCGACGGCATGAGCGCTCACACCCAGAGCTCCGGCCCTTCCACTGTACCCAGTGCGGCAAGAGCTTCTCAGACCGGGCTGGGCTGCGCAAGCACAGCCGCACCCACAGCTCTGTGCGCCCCTACACCTGCCCCCACTGCCCCAAGGCCTTCTTGAGTGCCAGCGACCTGCGCAAGCATGAACGCACCCACCCTGTGCCCATTGGAACCCCCACGCCCCTCGAGCCCCTCGTGGCTTTACTAGGAATGCCTGAAGAGGGACCAGCCTGAGGTCCAGGTCCCTCTGCCACACTCCTGGGAACCCTGCCCCTATGAGGTGCTTCCCAAACCCCCCTTTGCCGCAGATCACTCTTAGACTTCAGATCCATCTCTGTGCCCAGGCAGCTAGCTCATCCTGACAAAGCTGGGGACAGTGGTGGCTGGTAGCAGTTGGCAGGAGACCTGGCTCGCTCCAAGCACCACTCATTAAAGCATTCAGTTGACACTGGGTTGTCTTCTGTGTTCTGGTTGGGGGTAAGTAACAGAGGAGTTTGGGCACCTGATAAGGTTTAGTGGAGATCCCTGGACTGACAAGTTAGAAACTAGAAGGGTCTTTGGGTGCATTGTTTTCTCTAAATATGTTTTCAGAATATCTTGTGATGAAGGGTTCCAGGATCAAGTGAGTACCGGGAATTCCTGTACCTTCTTGGGAATTCTTGGTGATCAAAGTATATTAAAGTCATTGATAAGTCCTGCAATGAACAAATCTGTTTAGCTTCTTTAGCCCATAGTTATTTAACCTCTTACTGAGAGTTCTACTTCTGTCTTTTTACAGATAATAAACTGAGGCCAAAGTTATTATATTTCCTATAAATTATAATAACAGACTAGAAAATATACTTGGAGTCCCATTCTCAATAACAACAAAACCCATAAACTACAAAGAAATAAAGCTCACACAAAAAACACAAATCCTACATGAAGAAAATGGCATCTCTATCCTGAAGGATATAAGACCTAACTGAATGAAGATATACCATGTACCTGAATGGAAAGATACTATTAAAAGCTGTTGATTCTCAGTTTAATCTTTAAGTTCATTGCCATTCAAAAGGATATTTTTAACAGAACTTGAAAATCCTAAATTCCTGTGCAATATATATTTTTAAAAACTGGAGGTGATAATTAACACTAATTTTTCAAAGACCAAAAATGGAAAAACAAAAATGAGGCCCTACAGTGTAAATTGGTACAGCCTCTTGGAAAGATGATTTGATGTTTATCAAAAGTTAAATGCTTTGTGATGTATGTGATCATTATGCTGTACACCTTAAACACAGTGCTGTATGTCATATCTCAGTAAAACTGGAAGAGGAAAAAAGAAGCAAGCAAACACATTTTTTAAAAAGTAAAAGGACTTCCCTGGCGGTCCAGTGGTTAAGACCCCTCACTTCCAGTGCAGAGGGCATGGGTTTGATCCCTGATTGGAGAACTAAGACCCCACAAGCCATGCAGCACAGCCAAAAAAAAAAAAAGCATACACTTTTCGACTCAGCAAATACACCTCAAAGAATTTACACCACAAATATCTTTTTCCAATTCTGTGACAAAACTGAAAATGAAAGATTGTTCAGTGCAGCAAAATATGTGATGACTGGGAACACCCTCTATGTCCATTGCAAAGGTCTAAAAGCCACTGTAAAATATATTATGCAACAGTTTTTAAAAAATTAGACTTGTCAATCTGTGTCGTTGAATAATATCCAAAAAAAAAGTCAAATGAAAAAGTGCACAGCAGTGTGGTTAGTATTCTCCCATTTGGGCCGAATTACTCGTAAGCGCTCAAATCCAAGTGCACGGAGGAGTCCGGTGGACTGCAGGCCACGGGGTCACAGAGTCGGACACGACTGAGCGACTTCACTTCCACTTTTCACTTTCCTGCATTGGAGAAGGCAGTGGCAACCCACTCCAGTGTTCTTGCCTGGAGAGTCCCAGGGACGGCGGAGCCTGGTGGGCTGCCATCTATGGGGTTGTAGAGTCGGACACAACTGAAGCGACTTAGCAGCAGCAGCAGCAGCACAGTATTTCTAGAAGGATACTCAGGAACTGATTCTGAACTATAAATTCCAACTACTAGGGCCTTTCACAATTATAAGACAAACCAAAGCCAAAGGTCACAGTGAACCAGATCCTCCTTTCCACACTGTCACCTGTAGACTTGGGGGCCACCAAGTTGGCAGCCTTAGGAAATGTGGTGTTCAGGCTCCCTCCAGCCCATGTGCTGCTAGCACCTGAAGCAGAAGTAGTAGGTATCACCTTAGTGTCAGGGACCTCACGTCCATTCTCCATAGCAGAACAAGGGGGCCGCGTGGCAACAGCAGGGACCAGGGTGTAATGGCTGCAGAAAGAGGGCACCAGTTTGACCAAGGACACTCACTGGCCATACTCACACCCAGAGCAGGATAAGCACTGTCCCTGGGCCTCCTTTCTGTCCAGGCTGGGATCAAAGTCTAAGGGTCCAGGAAAGAAACAGACATCAGATGGGGAGATTGAAAGCAGGAGAACTTTTGTTTACTACTGACTTGATTTTTGAACTCGAGCAAGATGCTTTATCTTGGGGGTTGGGGTGGCACCTTTTAAAAATATATTCTTGTAAAGATACCATATGGGCTTCCCAGGTGGCACAGTGGTAAAAAAAATCATCTATCAAACAGGAGACTCAAGAGGCAGTTTCCATCCCTGGGTGAGGAAGATCCCCCGGAGTAGGAAATGGCAACCCAGTCTAGCATTCATGCCTGGAAAATCCTGTGGACAGAGGAGACTGGTGGGCTCCAGTTCATGGGGTCACAAAGAGTATTGGGCACAAGTGAGCACGTGTACATATACACACATACACAAAGATACCATATACACTAATCGATAGATCTCCCTGGCTATGTGTCTACAATGAAGGATGGAGTGGGTTCCCTGAATGTTTAGAAGAGATGCACAACTCCTGCTCCCTTTCTGGGCCCAGACAATCCGCCCATCCCTTGGGCCCCCTTCTCTGACACCCCCAGCATCCTATACCAAAGTTCCTGCTCCCTGAGGACTC EMBV3_25814 GAACGTCTCAGTACTTCAAAAGATGAGCCAGAAGCGGGTCTAGTCCGCCACAAGCCTAAG Gene BVT0102_067624 + 1 EMBV3_22260 GK000027.2:4942959-4951590 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02108 TTCTCTAGCTCTTGTGTTCTCCAGGTGGTGTTCGTGCGTCCCGATGCTTCAAAGACGCTT Gene GeneID:539266|ZBED1:XM_002700428:2_cdna Constitutive 0 NULL GeneID:539266 X GENE ZBED1 NULL zinc finger, BED-type containing 1 EMBV3_18070 AGAATGGAGCCATGGTGATGACGCGGGTTTTCTCTGTCACCTTGGGAGTCAGTGGATTCT Gene BVV0102_204413 + 0 NULL GK000019.2:37998547-38025660 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096676 TCONS_00096677 TCONS_00096675 1 XLOC_058031 Coding TCONS_00096677 XLOC_058031 Coding Coding B4GALNT2 19:38024427-38100230 = TSS71779 3262 1 TCONS_00096677_4 635 0.140098099325567 13 0.957138334080895 4.48264904054764e-05 1.06330514192529e-05 5.49701862344306e-05 4.69344312661487e-06 6.47951620514843e-06 4.43416340850248e-06 5.00956463721065e-05 7.15067281910978e-06 1.95764852469408e-05 9.90328089929169e-06 6.74694202864531e-06 4.85589375760474e-06 2.86773762804296e-06 7.01212594106641e-06 2.48861988976355e-05 2.54329511254792e-30 2.1091261722633e-05 0.00214600411028623 4.45653817679386e-05 4.58042858084711e-05 4.92230670910835e-06 0.000413866428517029 7.03360097541357e-05 0.000405346283846731 3.55362643838935e-05 1.66992738495698e-08 4.34929134924725e-05 0.000154000596089448 2.87111380291617e-05 5.63638955242739e-05 XM_584835.6 B4GALNT2 PREDICTED: Bos taurus beta-1,4-N-acetyl-galactosaminyl transferase 2 (B4GALNT2), transcript variant X4, mRNA. 0.0 3972 99.95 0.675659104843654 NM_001159388.1 B4GALNT2 Homo sapiens beta-1,4-N-acetyl-galactosaminyl transferase 2 (B4GALNT2), transcript variant 3, mRNA. 0.0 1727 85.40 0.463519313304721 TCONS_00096677_4 sp|Q8NHY0|B4GN2_HUMAN B4GN2_HUMAN Beta-1,4 N-acetylgalactosaminyltransferase 2; 0.0 842 75.09 0.859842519685039 1 coding 0 0 1 1 0.0507660738156718 0.62556172595325 0.0325586263714157 0.552012825580602 ATGTGGAGTGCGGAGCGCGGTGGAGGTGGGGCAAGACGGATCTCCGCGAACTCAAATGTGAGCTGCGCGGGAGCTTGTGAGGCTCGCGGACGAGTGGATGGATACCGTTTCAACAGAGCGGAAAGGCTGGACAATCGGCTGGGAGGCTGCCGGGCTCCACCAGCCCAGGGCGTCCGAGGCGGCGGGATTCATGATGACTTCGTTCGGGTGAGTGTCTCTAGAGCAGAGGTCAGTCTTGGCCAGCCAGACGCGCCTTCGGAGAGCGGCCAAGAACATCAAGAGCTTCTAAAATCAGGGAGAGAAAACCCTGACATCCCTGTAGAAGAAAAGGCTAGAGCAGGGCTTCTTCGTGGGCCAGAGACTCCTGAGGGCCCCAGTGACCTCCTTAGGGAGTCTGTAAGCTCTAGATATCTGTGGATCCTCAAGATGTCCGTCTTATTCTTGGCCCTGGGCATTGTGTTATTTATGTTCAGAAGTGTGTACCTGTATTCAGAATTCAGCAGCTACAAAGCACCACTCCTTCAGCCTAGTCCGGCTGCCGGAATGTTGAAGCTTCTCCCTGAGGAACATATCAAGACCCTCTTTACCCACGATGGAATCTGGCTCTTCCCGAAAAACCAGTGCAAATGTGAAGCCTGGATACATCGGCAAAGATATAACTTTGAAAATGCCTATGACCAGACTGACCTCCCTGCGGTGAAAATGAGGAGACAAGCTGAATTTGAACACTTTCAGAGGAGAGAAGGGCTGCCTCGCCCACCACCCCTGCTGGCTCAGGCCAACCTCCCCTTTGGGTACCCGGTCCACGGAGTGGAGGTGATGCCCCTGCACACAATTCCCATCCCGGGTCTCCAGTTTGAAGGACCAGACGCTCCCATCTATAAGGTCACCCTGAAAGCTTCTCTGGGGACACTGAACACCCTCGCTGACACCCCAGACAGTGTGGTGCAGGGCCGAGGCCAGAAGCAGCTGACCATTTTGACCAGTAGCCGGAAGGTTTTGAATTTCATCCTCCAGCACGTGACATACACCAGCACAGAGTACCAGCACCACAGGGTGGATGTGGTGAGTCTGGAGTCCAACTCCTCAGTGGCCAAGTTTCCAGTGACCATCCGCTTTCCTGTTATGCCTAAGTTATACGACCCTGGACCAGAGAGGAAGCTCAGAAACCTGGTGTCCATTGCCACCAAAACTTTCCTCCGTCCCCACAAGCTCATGACCATGCTCCAGAGCATTCGTGAGTATTACCCAGACTTGACCGTGATCGTGGCTGATGACAGCAAGGAGCCCCTGAAAATTAATGACAGCCATGTGGAGTATTACACCATGCCCTACGGCAAGGGTTGGTTTGCTGGTAGGAACCTGGCCATATCTCAGGTCACCACCAAATACGTTCTCTGGGTGGACGATGACTTTCTCTTCAATGACAAGACCAAGATTGAGGTGCTGGTGGATGTCCTAGAGAAGACCGAACTGGATGTGGTAGGTGGCAGTGTGCTTGGAAATATGTTCCAGTTTAAGCTGTTCCTGGAGCACAGTAAGAACGGGGACTGTCTCCATCGGCGGACAGGATCTTTCGGGCCCCTGGACGGCTTCCCCAACTGCGTGGTGACCAGCGGCGTTGTTAACTTCTTCCTGGCCCACACAGAGCGGCTCCAAAGAGTTGGCTTTGACCCCCGCCTGCAGCGAGTGGCTCACTCAGAGTTCTTTATTGATGGGCTCGGGAGTCTGCTCGTGGGGTCCTGCTCAGATGTGATTATAGGTCACCAGCCGCATTCTCCAGTGGAGGACCCAGAGCTGGCAGCCCTGGAGAAGACCTACCGCATATACCGGGCCAACACCAATGATAAGATCCAGTTCAAGCTAGCTCTCCACTACTTCAAGAACCACCTCCAATGTGCCACATAAAGATGCCTGGACTTCGGCAAAGTGCTAGGTCTGGCTCAGTTACTGTAGGTCATTAGAAATGGACCAATCACTGATCAGAACAATGGCAACTATATTAATAATAATTATTGTTTGATGTCTTACCATTTGTGAATCACTGTACACACCTGATGTGAAGAGCTGACTCGTTTGAAAAGGCCCCAATGCTGGGAAAGATTGAAGGCAGGAAGAGAAGGGGACGACAGAGGATGAGATGGTTAGATGGCACCACCAACTCAATGGACATGAGTTTGGGTAAACTGTGGAAGTCGGTGATGGACTGGGAGGCCTGGTGTGCTGCGGTTCGTGGGCTCGCAAAGAGTTGGACACAACTGAGTGACTGAACTGAACTGAACTGTACATATAATGGTGGTGGTGGTGGTTTAGGCAATAAGTCGTGTCCAGCTTTTGAATCACATTATCTCATGCAAAAGAGCACATGATGGATTGGTATCCTTGATCAAAAGGATCAAAAGGATTGGTATCCTTCTGGGTCCTTGAGGGTTATTTGGTGGGTATTACATCACAGATCATCTCTAGCGTCAACTGTCATCCACAAATTTTTATTTGGTCATACTTTGTGGACTCAAATAATGTGAATAACCCAGAGTCCTTACCTTGAGGAAGTGGCAGTCTGGTTCAGTTCATTCCACTAGTAGCATTGGGCAGCCAGGCTCAGAGGATCAGAGTGGGGAGAACTTACAAGGGCCCATGCAGGTGAGGAGGGCTCTGTGGAGTCAGCTTACCTGCAGTCCAGCACATGGATGGGATCCAGGAAAGTGGAGGGCAGAGATCACTGGGTAGTCCACTCACTGCTGGAATAAAGCTTTCCCTGGCATTAGATACTTACCATAAAGACACATTCCAGAATGCTTGGGATTGAACTTGGACCTTGTACTTTGTAAGCGCTGTGGCCAAGCCACTAAATTCCAGTTGCTTACTACTCAAGACTGCCATTGTCTGCAGAATGGAGCCATGGTGATGACGCGGGTTTTCTCTGTCACCTTGGGAGTCAGTGGATTCTCCCACTGCTGCGCTGCCTTTTTGTTTCCACTCTTTCCTACTGAAGACAGCCACGGTAGTTCAAAATCTCTGAAAAATGTGTGAGATGTTAATTCATGAAAAACGTTTTGGTTCTCAAATAATTTTTAAAAATACTGCATGCTCTATCTCCCTCTTTGACAATCACAATTCATATTAGTATATTCAAGGCTCTGAGAAGTCCTGCTGTGAAGAAATTGACTTAACGTCAATTCAGTATTTCTCAGATATGGATACAGACTGGCCATCATTTTTTTTGTTCTCCTGAACACAAATAAAGCACATACCTCATTCC EMBV3_00859 CCTGCTCTGAAGCTCACTAAAACCATCCAGAATTTATACGACCTGGATGATGATGACGAT Variant GeneID:512693|POLDIP3:NM_001103183:165_cdna 519^605 3 EMBV3_07449 GeneID:512693 5 GENE POLDIP3 NULL polymerase (DNA-directed), delta interacting protein 3 EMBV3_32670 GATACTGAACAGATCATTCACTTGTCGTTTCTGGGAAGATAAAGTGTTACGGCCCTTCGC Gene BVT0102_218820 + 0 NULL GK000023.2:39606597-39611982 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133401 TCONS_00133404 TCONS_00133400 TCONS_00133403 TCONS_00133405 TCONS_00133410 TCONS_00135162 TCONS_00135161 TCONS_00133406 TCONS_00135160 TCONS_00133399 TCONS_00133407 TCONS_00133411 2 XLOC_081105 XLOC_081648 Coding TCONS_00133401 XLOC_081105 Coding Coding NUP153 23:39524392-39611813 j TSS99638 11141 1 TCONS_00133401_5 1447 22 0.872809425760696 0.000329125282119683 0.000994069229075131 0.000280134968593788 0.000224761439403131 0.000752321909633809 0.000151964501691718 0.000881059436397786 0.000367287510846219 0.000241497886001079 3.00645844923006e-05 6.26021891172996e-15 1.23959590719198e-09 3.28695794036225e-05 3.54036596218599e-05 0.000236088557041196 7.90127338259763e-21 2.1082849212432e-19 5.43392304136722e-24 0.00107797484263315 0.00137363418361748 3.93741548799847e-05 4.22519493730243e-13 5.10621741950325e-32 2.38805852366984e-54 0.00120004216015 0.000609683227796942 0.000141162178839417 5.85413575502679e-32 7.02316880228086e-12 5.69595118975724e-05 NM_001205754.1 NUP153 Bos taurus nucleoporin 153kDa (NUP153), mRNA. 0.0 8646 99.98 0.430482003410825 NM_005124.3 NUP153 Homo sapiens nucleoporin 153kDa (NUP153), transcript variant 2, 0.0 6783 88.03 0.482541962121892 TCONS_00133401_5 sp|P49790|NU153_HUMAN NU153_HUMAN Nuclear pore complex protein Nup153; 0.0 2237 84.99 0.997235659986178 3 coding 0 1 1 1 -0.00405448488344998 0.973984018592583 0.0314455077508006 0.543320544113629 GTGTTGGCTTGGTGAGGGCCTCGGTGGAGACTGTGGGTGTCCTTTGATGTTCTAATTCTGAATCCAGACCTTCGTAGGCCTTACCTTTCCCAAACCAGGAGTGGGTCTGTTTAACCAGCTTTGCTCCATGGCTGCAGAGTTGCCTTCTGTTTGGCAATACTGCCGATTTAATATTGTATGTAGAATAGTCTAATTCCATTCATGTTTGCTTTGGAGAATGTTGGATGAGTTCTTTTTGATTTTTGGTTTTGAAGAACCACATTTGTGCTGACTCATGGTACCCTGTTGTCCCTATAATGAACCCAAACAAGGGCATTCTTAGCAGGGTTACAGAATCTGTTAAGAATATTGTGCCTGGATGGCTACAGAGATATTTCAGCAAGAACGAAGATGTATGTAGCTGCTCAACAGACACAAGAGAGGTGCCACAGTGGCCAGAAAATAGGGAAGATGACCATATATACTCTGATGAGAGCGCGAACATTCATGACGGGAGAATCACTCCTGAGCCAACAGGCAGTAATACAGAAGAACCCTCAACAACTAGTACCGCTTCAAATTATCCAGATGTATTAACAAGGCCTTCTCTTCATCGGAGCCATTTGAATTTCTCCATGTTGGACTCTCCTGCGTTACACTGTCAGCCCTCCACATCTTCGGCATTCCCCATCGGCAGTTCTGGATTTTCCCTCGTAAAGGAAATTAAAGATTCTACCTCTCAGCATGATGATGATAACATCTCAACCACCAGTGGTTTTTCTTCAAGAGCTTCTGATAAAGATATAGCTGTTTCAAAGAACACTTCGGTGCCACCTCTGTGGTCCCCAGAGGCTGAACGTTCTCATTCATTCTCACAGCACACTGCCACCAGCTCAAAAAAACCAGCATTCAACTTGTCTGCCTTTGGAGCACTTTCTCCTTCACTTGGGAACTCTTCAATTTTTAAAACAAGTCAACTTGGAGATTCTCCTTTTTACCCTGGAAAAACAACGTATGGCGGGGCAGCAGCCGCTGTAAGACAGTCTAAACTACGGAACACACCGTATCAGGCACCAGTCAGAAGACAGATGAAAGCTAAGCAGCCCAGTGCACAGGCCTATGGTGTGACCAGTTCAACAGCTCGGAGGATATTGCAGTCCTTGGAGAAGATGTCAAGTCCTCTAGCGGATGCAAAAAGAATTCCATCTGTTTTTTCTTCTCCTCTGAATTCTCCTCTTGATAGGAGTGGGATGGATACCACCACAGACTTTCAGGCCAAAAGGGAAAAGGTGGACTCTCAGTACCCCCCTGTTCAGAGACTCATGATCCCAAAGCCAGTTTCCATAGCAGCAAATCGAACTGTTTATTTTAAACCATCTTTGACTCCATCTGGTGAATTAAGGAAGACTAATCAAAGAATAGATAAAAAGTACAGTACTGATTATGAAAAAAATACTACACCAGGACAAAATAGAGAGCAACAAGAAAGTGGCTTTTCTTATCCAAATTTCAGTATGTCTGCAGCCAATGGTTTATCTCCTGGAGTAGGTGGTGGAGGTGGCAAGATGAGGCGAGAGAGAACACGTGTTGTGGCATCTAAACCTCAAGAGAAGGAGGAAGTGGAAGTACCAGTATTACCGAAAATCTCTCTACCCATCACCAGTTCTTCACTGCCTACCTTCAATTTTAGTTCTTCTGTGATCACAACTTCCTCTCCATCACCCATTAGTCCTTCACAATCATTAACAAATAAGGTACAAGTGACCTCTCCAAACAGCACTGGCAGCCCCTTGTTTAGATTTTCATCTCCAATTGTAAAATCTACTGAGTCAGATGTACTACCTCCGTCATCTATTGGATTTACATTTAGTGTGCCTGTGGCAAAAACAGCAGAGCTTTCTGGCCCTAGTAGTGTTTCAGAACCAATTACAAGCAGTTCAGCTCAAGATACCACTGCAGTGAACAGTACAAGCTGTAAGAAGAAGCAAGATGAAGATTGCGAGAGCCCTTTCAGAGTGGCGAAAACCCTGAAAGAAGGAAGTGTCTTAGATATTCTGAAGAGCCCTGGTTTCGCATCATCGAAGGCAGATTCTCTCGCTGCTCAGCCTGGCACCACAAGCCCGGTAGTTCACACAAGACCAGCAATAAGCAGCTTTTCTTCTAGTGGAACTGGGTTTGGGGAAGGTTTAAAAGCTGGGTCATCGTGGCAGTGTGATACTTGTCTACTCCAGAACAAAGTCACAGACAACAAGTGCGTAGCCTGCCAAGCAACAAAATTGCTACCTAAAGATTCTGCTAAACAGACTGCAGCCGGGACACCAAGTAAAAGCGGCAAAGTGACTCTTTCCACACCAGGGACAGCAGGCTTCGGAGACAAATTTAAACCAGCTGTAGGAACTTGGGATTGTGATACCTGTTTAGTGCAGAATAAACCTGAAGCGATAAAATGTGTAGCTTGTGAAACACCGAAACCGGGAACTGGTGTTAAGCGAGTCCTTACGTTGCCAGTGGCTTCAGAAAGTGCTGTAACTGTGGCTGCTTCCTCCTCCAGCTGCACTGTGACCACTGGTGCCTTAGGATTTGCAGATAAATTCAAAAGGCCCGTGGGATCTTGGGAGTGTCCAGTGTGCTGTGTTTCTAATAATGCAGAAGACAATAAGTGTGTGTCCTGTATGTCTGAGAAACCAGGAAGTTCAGTACCTGTTTCAAGCAGCAGCATGGCCCCCTCAATCTCCCTGTCATCTGGAGGCTGCCTAGGTTTGGACAAGTTCAAGAAACCTGAGGGAAGCTGGAACTGTGAAGTGTGCCTAGTGCAGAATAAAGCAGATTCAACCAAATGTATAGCATGTGAAACTGTAAAGTCACACACAAAGCCCGAGTTTACAGGCTTCGGCACATCTTCCTCATCTTCGAACACAGCAACCTCATCCTTCAAGTTTGGCATCCCATCACCCTCTTCTGGGCCCTCTCAGACGTTAGCCAACACTGGGAACTTTAAATTTGGAGATCAAGGAGGCTTCAAAATTGGCGTGTCATCAGATTTGGGGTCTGCAAACCCCTTGAGTGAAGGCTTCAAATTTTCTAAACCCATAGGAGATTTTAAATTTGGAGTTTCATCTGATTCTAAACCTGAAGAAGTCAAAAAAGACAGTAAAAATGACAGTAATTTTAAGTTTGGACTTTCTTCTGGTTTAAGCAATCCAGCTCCTTTAGCTCCATTTCAGTTTGGGGTGTCTAGTCTTGGGCAGCAAGAAAAGAAAGAAGAACTGCCTAAATCCTCATCGACGGGCTTTAGCTTTGGTTCAGGTGTCATTAACCCTCCCCCCACTGCTGCTGCTGACACCGCGGTGACCTCTGAGAGCAAGAGTGGCTTCAGTTTTGGAACCACAGACACCAAGAGTGTCTCTGTGGCTCCTTTCACGTGTCAGACTTCAGAAGCAAAAAAGGAAGAAACACCTGCTACCAAAGGAGGGTTCGCTTTTGGCAGCGTGGACCCTACCCCTCTGCCGTCAGCCTCATTATTTGTTTTGGGAAGGACAGAAGAGAAACAGCAAGAGCCTGTCACTTCTACATCTCTCGTGTTTGGGAAGAAAGCTGACAATGAAGAGCCGAAGTGCCCACCGGTGTTTTCCTTTGGGAATTCAGAGCAAACCAAAGACGAGGGCTCTTCCAAGTCAACCTTCAGTTTCAGTGTGGTGAAACCATCTGAAAAGGAATCCGAGCAGCCAGCAAAGCCCGCTTTTGCTTTTGGCGCTCAAACCAGTACTGCAGCTGATCAAGGTGTGGCCAAGCCAGTTTTTAATTTCTTGAACAGCAGTTCCTCTAATTCAAGTGCACCAGCCACTTCAGTTGGTGGTGGCATATTTGGTAGTTGCACCTCATCCTCCAGCGCACCTGTGGCTGCCTTTGTGTTTGGACAGGCCAGCAATCCCGTGAGCAGCTCTGCCTTTGGAAACGCTGCCGAGTCTAGTACATCTCAGTCTTTGCTGTTTTCTCAAGAGAGCAAACCAGCAACCACATCAAGCACGGGTACAGCTGTCACCCCATTTGTCTTCGGTACAGGAGCCAGCAGTAATAACACTGCAACCTCTGGCTTCAACTTTGGAGCTACAACCACATCTAGCTCTGCAGGATCCTCCTTTGTGTTTGGCACTGGAGCTTCAGCACCTTCTGCCAGCCCAGCGTTTGGTGCTAACCAGACCCCAACATTTGGACAAAGTCAAGGTGCCAGCCAGCCTAACCCCCCAGGTTTTGGATCTATATCATCTTCAGGGGCATTATTTTCTGCTGGTTCTCAGCCTGCACCACCTACTTTTGGGACAGTGTCAAGCAGTGGACAGCCTCCTGTGTTTGGACAGCAGCCTGGTCAGTCTGCATTTGGCTCTGGGACAGCTCCTAATCCCAGCTCCGTTTTCCAGTTTGGCAGCAGCACTGCGACCAACTTCAACTTCACCAACAGCAGTCCGTCAGGCGTGTTCACATTCGGTGCAAGTCCCAGCACACCCGCGGCCTCCTCCCAGCCCTCTGGCTCAGGGGGCTTTCAGTTTAGCCAGTCTTCAGCAGCGTTTACTGTGGGGTCAAATGGGAAAAACATGTTCTCTTCTTCTGGACCTTCGGTTTCTGGTCGAAAGATAAAGACTGCTGTTAGACGCAAGAAATAAAGGTCATGATGTGTTACACACACTGTTTTAACAGCTGGCGCACTGCTCTCAGATACTGGATTGTACTATAATACTGGGTTATCTGAAGTCAGATCTGCCTAAGGACTTCTTTAATTTGGGAATTTTCCTCCTTTTTTCTTTATAGAAGCGCAACTTCACCTCTCCCACCCCCCTTTTTAAAAAGATAATAGCTAGACTGGTGACTGATTCTTCAGCAAAATTATTTTATGATCCAGCAAATTATTCACTGATTGGCATAGGCTGGCAGAACCAGGAACCGAGCCTGCTCGGAGAGTGGCTTTGTGTAGAACCTCTTCGTCCGCACCACCGCGCGCGGATACGCGTTTATGGAGCGCGCTGCAGTTGTAACTATATCTGAGGAATTCTGTATAGACTAGAGAATGTTGAAATGAATGATTTCTATGCTGAGTTTGTGCTGGTGTGTATGTGTGAAGTGAGTGAGTTGGGTGTATCGTGCACTAAAATTTTCTGATAGAGGAAGCCTGATTAAAGAACGGTCCATGCTAAGGACTTGTTAGATCTAGTTCGTTCTCCATTGAATAATTATATGCTATTTCTATATTGTCATTCTTCTATCACCTGTCTTGCCTTTTTCATTATTTTATTATGAAACTTGTGTAAATACAATCTTGTTTCTGTACTTTTTTGACATAACATAAATCTGTGAACTTGAAATTTTAATTTTGTGTTAGAAATTTTTTTTGTTGTTCGTTTAGTCTCGTCTCAGATTTTATTATGTAAATCCCATTATTCAAAGTTGCCTAAATCCATTTGGAAATCTTTAAAAAAAAAAAAAAATTGGGGATTCTTAAAGTGAGTTTATTGGCTTTTCTGATCCAGTTTTTGTTTGGACCAAAAACCAGTATTGTACAAAGTATTAAGCATATATTTTTATATTTACTGAAATGGACTGTGGTGACTTTGGATAATAAGGAAAAGTTTAATATTAAAGCCATGTTTATTACAGTATAATTAACATGTTAAACCATGGGATAAATGCCATCAATAAAAAATTATGAAATACTTTTTGCTCTAGTGTTAAATTATAGTGAAGGTAAAAGTGTTAGTGGAAGGGAATCTTTTTATAGAAGTTAACAGTGGTCAGTTAGAAGAGAAATTCCAAAGAATACATTTAAGGTGATTTGGACAGCTCCTATGTCTGAAGGTACGCTCGCTGCATTTTTGTCTGGTGCTAGGAATCACGCCTACTTTGCATATAAATTGATATACCTTTTTAAAGTAGAAAATAAATGGAAACAACCATTTCTGTTTGTACTTGTATCTTCCTTCATCGGTGACTAGACAATGTTTATTGATTGAATTTTTGGAGATACATACCTAAAGTAGCCCACAAAAACTTCAGTGGTCCTTTTGTGCGATTTCTTTTGGATTGTTTTACGGATTATTATTTTTTTTTAAGAAGTAGATTTGTTACGGCCCATAAAAGAGCTCTTGGGCAAGAGCATTTGACAACTTTATTCTTCAATTTGAACATATAATTTTATGGTGACTTTTATTTTTACTGAAGTTGTGGTTAGAGTCTAAAATCAGTACTTTAACATGTTTGAGCTTTTCTGTTTCCAGTGAAATGATTTCTGTTATGGAAATGTCTTAGGCCATCATCAAGTGCTAGCTTTGGAGTCGGAATTTTGTATTTATAATTCTCAACTTATTAAATAATAAATGTTTGACATGAACCTGTTTGGAGGGCAGAAGATGATGGTGAATACTAATGGAGTAAATTGGAAACGTGTGGGGTGTTAATGCTTAACTAAATTGCATGCTCGCTCAGTCTTAGTCATTGTTTTAAACCCATATGGATGGGGATATTAAGCTTTCTATTCTGGGAAAGATTTTTCATTAAAAATGTACTAGAAATATTTCATTTTATTAATTTTTTTTAAGCTAGTAACCAAAAACCAAACAGGGTGAGTTATCTTATAAAAATGAAGTCTCCTATGCCCCCAGAACTGAGATCTCTAGGGCTAGAGTTGTTGGGACTTGGGACTTGTTTTTTCATCTCTATTGCTTTAACTCTCAGGCTGCACGTGGCAGCTATAGAATACACTCCTGGTAGCAGTTCCAACCACAAATCTTTCCCTGCTGAAGCCCAGCCGACATCTCTCTTCATCAGATTGGTGCAGGCTGCAGACCCACTCCCTGTGGCTGTAATAGCAGCCTTGGGTTCCATACTCCATACACAGATGAAAGTCAAGTGCTGTTTGTGAAACATGGGGAAACGTTATGGAAAGAAAATAGCCCACTTTTCATGCTGGATCAATGAGGAACTGTTTTTAACCGAAAATAATCTGACGGTAAGAAAGCCATATGCAAAAAGATTGAATAATCAGGTATGTTTATATAATTCAGTTGATTTGCAAGAGTCAAGTTGTTCTCACTGAATGTATCAGTATGTTTGGTGGGGTGTGGCAAATGTATATTCTCAGACCTATGCACCAGAGATTCATGCACTCGCTCGGTTCAGATCATGTCCAAAAATCATTCAATAAGTGCCTGGAAGACTTGCAATGCCTGAGGTCCAGGCCTGCCACTTCTAAGGGGTAGGGTTTTTTTGTTTTTTGGTTTTAGTATTTTACAGTTTGAGGCGTTAAGAAAAAGTACAGTTCAGACAACTGAAGTTTAAGTCTTTAGCTAATATGTTATGAATTTCTAATTATTCATGTAATTAGGATTTTATTACTTGAGATAAAAGTGTTGGACTAATGTTAGCAATTTATAACCAGTCCATGAACTTCCTGGTTTAACCTGGGGAAGAACTTACGGTTTAATATTAGGGTGTCAGGTGCTGGCCCTGTCTAATGGAAACTGACAAACTTGGTATAGTAAAATCGAGAAAAATGGAATGTGTTGGGTCTAGCTACACAACAGCTTTATGTCAGAGCTTTCATTTCCTTTTCATGTGGGGCGACTTTTAGAGACATCTCTGACCTCCACTGTAGTTCAGAGTGGAGTGGCTGGGTGCCTAACAGCACACTGCCTACAGGACTCAGACCACACTGTAGTTTAACTCCATTTAAGTTTACCTTTTATTATCTTTTTCTTTCTTGAGGAACCTGTTTTGTATCCTGTCGATCTAGTTTTGTTGTAATTGTTTGAATAGGGAATGCTCCTAAGACCGGAATAAGATTAAATCGCCCGGCTCTTTGACTAGCTGTGACTGAATTCTTGTTCCTCATGTGTCATGTGGGTCTTTAATACCTTGCACGGTGGCTGGAATGGTTAACAGCTTTTACGGAATGGACAGGATTAGTTTAACATCAAAAGCTTAGTCATCTACAGCTAACTTGAGTGACTTGCTAAAAGAATATACCTCAAAGTGGATGATCTTTTTTTTTTTTGGATAGACTTCTATTTCTGAAAGCACTCATCTCTTGAAGGCAGAGAATGCTAGAGCAGCTGTATTTGGAAGCAAGAGATTCTAGAGCAAACCTCAAAGAAACAGGCAAAACACAAAGCATTGTTGACCAGGTATTTATTGAGACAGTACAAAGTGGTGGCATATAAATTATTAAAAATAGAATGCTGAATTTTTATTTAGTAGGCAGGCCATCAGATTACTGCTTGTGGGTCACACCATACTATAAATGAAACTGCAAGGAAGTACATATACAATTTGAGATGAATTTTACCCAGGCAAGTACATACTGATAAATTCTGGCCTTTGGCATAGAGGGGTGAGAAGTGGCAAGTAAGTGAAATACTTGCCAGATTTTAGGAATACTGCCATTATTTAGGAATATTTTTTAAAAGGAAGAATAGCCTATTTTCATAGAGATAAGTATAGAAGGAAAATATTTAATACCCATGCTCCCATCAAAAAGCCCTTTATCCCCAAGTAGCAACAATTTTTCAACTCCTGTCTTTGTTTTGCGGGAACTATTTATGTCTCCATGCACCCAAGCAAGTTACATAAGGGAAAAAGTCCTTTTTTAAGAGTTGAAACAATTTTTACTGTCATTTGAAACAAACATGAAGACTTTTATAAATTGAAACAAAACTCTGAAATATAATGCATTTTTTTTCAATCCTAAATATTTGGGGGGAGATGCGGTGACAATTTAGGTAGAAAGCATTAGCTTCTGAACAAGTGCCATATGAGTATCGCAGCAAGTACTGGCCTTCTCTCTAGTCACAGATTTAAAAGCACAGCTTGCTCGCCACCACTCACTCTCACTTGCCTCAGCCCAGCATACACTTAGTGTGTCTGACTTTTCTCAAGGTCCTGGGGCCACTCAGGCTGCTTTAGTTAATGGGTAGATTTTCTAGATGCCTAAATTATCTGCCTGTTTTGTGGTTTTATGTATGGTATGTTCATTGAAATCGTATTCTCAGCATGACTTCTAATTTTTGTTCCTTTATTATCTTGTAAAAGTGATGAATAATATTTATACTATGAGACAGCTTTCTTTTTGCCTTTTTAGGCTGTGGAGCTTCAGTATGAGGCTGTACACAGAAAAGTCAGCATTTCTAAAAATGAAATATAATAAAGTATACAGAAAATAAAGAGGGCTCCACCCCAAAAAACCTTCCCTATTTTGTCATTTATTTCCCCTCAAATTTGGGAATCCAAAATCTCCCTAAGTGCTACATTCATAATCAGACTTGGGTTTTCATGTAAAGGCAGACAGAGTAATAATAATGTTTATTTTATAGGGCTACATAGTTTAACTTGAATCCTAAGATAGCTCTCAATGCATCTACATAGATATTAATCTGAATCACTTGTGTATAGCAGATGTGCAATATTTTAATGTATAAATCAAACTGGGTATTTACTTTTGTTTCACTGTATAAGTAAAAATAGCCCAGGTAGTTAACCATCCAATTATCTTAGAGGAAAGTATACATTAAAGATAAATTCCACAGCGATATGTAAGAGTACATTTCAACTTGAATTCCCAATCCAGGGCAAAGAGGTGTGTATATGTCAATAAAGTATACACTACTAATCAGTTAAGTATGTAACCATTTATGTAACATTTCCTAATAATCTACTCTGAAAAAGTTAGTGGATGGTTTTGGTTTGTTTACTGCGAAGGGCCGTAACACTTTATCTTCCCAGAAACGACAAGTGAATGATCTGTTCAGTATCTTAACACATTTAACTAACAGGCTTTCTGTGATGTTTTTCAAAATAATTTTATATTAAATCCATGGTTTATGAAATTTTACAATCAAAAGTATTAAGGACATTGTTAAGGTTTCTATAAACTGAAAATACATTTTAAATGTCAAAAAGACCCACTTTAAAAACTGATACAGTAATATAGCAATGTATTTATTATGACCAAAATAAAGCCTAGATTGATCCTGTAAGCACCTGAGATATGAACTGTTCAGTACAGCTTAGTGTTTTGGGGGGAGAAAATAGAGCAAATGCAGAAAATGCCTAAGAAAACTTTTAGTTTAGCTATATCTCAACACAGCTAACTGGGCCATCTAACAAAAGCACACACACACACACAATTCAGCGACAGAATAAAATAGCAACACACACAGTATTACACATTTCCCTCAAAACATCATCCCTGACAGACTCCAAATGAGCTGGCGGCCTCAGAGCCAAAGAACTTCGAACACTGTCTGGACATGCTGCTCTTCCTTGCTAGAGAACAGTCCCTAAAGGGAAAATTGCTAAGTATCTCATAGGCTACTATTTATTTAATCATGAAATGCTAGGATGACTGAACTCCTTGATGTTTCAAAAGTTATGGAGTATAATAAAACTAAAACTAGTATGTGAATATCCTGTATATAAAGAGAAGGTATACTCAGAACACTGAAAAGCACTAATACTTCATGCTGCGCACATACTGGGAATATTGTTTTAGAGTAAATATGCCACAGTTTGATGGAACTAATTTCCCCCCACATATTTATAGTTTGATTTAGGGCACAGAAAACATCTGCACATGAATTTCAATTTACAGTGAAAATTTACCCCCCCACACACACACATAACACCCCACCCCATTTAAAGCAATCACTAACTTACCTTTTTCTTAAAAAAAAAAAAAAAAAAAAAGCAATATGACTTAATACTTTTTCATCATGCAATACTTATCCTGAAATACATGTGTAGGCATTAAGAATAGCTGTGAAGTCATCACTCCTGCGGTAAACTGCAGTACAGGTGTTAACATTTCAGATCAGGGAACTGCTTGGCTGGCCTCAACCTTCCCCTTGTAGTTAACTCACCACCCCCTGGGATGGGAGCTAAGTGGATTATAAAGTGTGTGTCCCCACTCCCTCCCCACAAAAAGCAAAGACGAACATTTCCTCAAGACGTGTTAACTAAAAGAATAATGTGTTTACAAAACACAACTGGACGTTTTCCATCATTTTGGGATAAACCAAAATAACTTTTTAAAGTTTCATTTGGAGATTTCAAAGCTGAAAGTGCATTCAGCAAATTCTAACACCTTAGATGTATATACTGTCTGTTGATGATGACACCAC EMBV3_41176 GTGAAGATTCCAGAGAAGCCCGTGAACAAAAACCTGAGCTGGCTGGAGGAGAAAGAGAAG Variant GeneID:520454|RAPGEF1:XM_002691648:368_cdna 205^318 1 EMBV3_43667 GeneID:520454 11 GENE RAPGEF1 NULL Rap guanine nucleotide exchange factor (GEF) 1 EMBV3_29836 CTGCCTTGTGAACAACCAGAACATGGAGAGAGAAAGAGGGGTAGCAGGTCAGTGAGGAAT Gene BVV0102_321679 + 0 NULL GK000004.2:43782574-43833374 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05748 TGCATCCCTACCCAATTATAGTATGCCCAACTCCCAGTATGGTTCACAGGCACCACATGC Gene GeneID:540340|SYNPO2:NM_001083751:39_cdna Constitutive 0 NULL GeneID:540340 6 GENE SYNPO2 MGC151521 synaptopodin 2 EMBV3_18785 AATCGCTGCTGGACTCACGGGGCCATTTGAAAGGCAACAATCCCTATGCCAAATCCTACA Gene GeneID:100337016|LOC100337016:XM_002685111:21_cdna Constitutive 0 NULL GeneID:100337016 1 GENE LOC100337016 NULL Down syndrome cell adhesion molecule-like EMBV3_31804 GATCCCTGTGACCCGACCTTGGAGGAGGAGGCATATCATGGAGCATCTCGAAGGTGTCAT Variant GeneID:616647|MCFD2:XM_002691308:429_cdna 93^253 2 EMBV3_06464 GeneID:616647 11 GENE MCFD2 MGC128641 multiple coagulation factor deficiency 2 EMBV3_26823 TCCCAGTCCTTTATGACCTCCCAGCTGGAAGCCAACAATATGGAGGAGCTGAAGGAGGTA Gene GeneID:100141172|LOC100141172:XM_002690984:262_cdna Constitutive 0 NULL GeneID:100141172 10 GENE LOC100141172 NULL similar to hCG21972 EMBV3_30127 CGGTTGTACGCGCAGTCTGCCCAGTCGGATTTTTACACCTGCAGTGGAATTCAAGGAAAG Variant GeneID:100141235|LOC100141235:XM_002691066:502_cdna 67^188 3 EMBV3_29296 GeneID:100141235 10 GENE LOC100141235 NULL similar to Chromosome 14 open reading frame 50 EMBV3_05089 TGTAAGGCCTAAGCCAAAGCCAGGGGATGGAGAATTTGTGGAAGTAATTTCCTTACCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41046 CACCAAGCTGGACCCCGAGGGCAAGTCCGCGTTACAACGCCCTCCACCTGGCCGCTAAGT Variant GeneID:530559|ANKRD24:XM_002688934:130_cdna 276^364 1 EMBV3_29232 GeneID:530559 7 GENE ANKRD24 NULL ankyrin repeat domain 24 EMBV3_34113 GGGCCTTAAATACCCATTGGCTGCAGTGTTCATGTCACTTCTGTAGGAGATGCCTTTGCC Gene BVT0101_065025 + 1 EMBV3_09719 GK000006.2:36992018-37117208 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24702 ATGATCGATTTTGCGCACACCACGTGCAGGCTGTATGGTGAGGACACTGTGGTCCACGAA Gene GeneID:508236|IP6K2:NM_001034317:112_cdna Constitutive 0 NULL GeneID:508236 22 GENE IP6K2 IHPK2 MGC128671 inositol hexakisphosphate kinase 2 EMBV3_35844 TCACATGCTGTTCAACCACTCAGATTTAGCACAAGCGACTTCACCCTCATCCTCAGCAGC Gene GeneID:100126052|LOC100126052:NM_001105654:5_cdna Constitutive 0 NULL GeneID:100126052 2 GENE LOC100126052 MGC140265 UPF0546 membrane protein C1orf91 homolog EMBV3_27739 CGCCGGCCTGGGCTGCGGCGGACGATAGCGAAACAACAGAATCTCATTTACTTAAATCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03127 AGAGCGATTGGAGACGTGACTGCTTTTCCTCGGCTCCTCTCAAGTTTGCCCAAAAGTTTC Gene GeneID:282640|DCPS:NM_174695:5_cdna UTR3_Alt 2 NULL GeneID:282640 29 GENE DCPS HINT-5 decapping enzyme, scavenger EMBV3_01170 ATGGGTGGGGCAGCACTTGAGAAATCCTGAGATACAACTGTGAGTACCATAGAAGCCGTC Gene GeneID:533008|LOC533008:XM_002692963:96_cdna UTR3_Alt 2 NULL GeneID:533008 15 GENE LOC533008 NULL similar to solute carrier family 35, member F2 EMBV3_02645 TCTGCTGCCCTCCTCTTGGTTTCTGGCATGATCTGGGACTGGATCTTTTTGAGGGAGACA Variant GeneID:540701|MEP1B:NM_001144098:118_cdna 64^127 2 EMBV3_30322 GeneID:540701 24 GENE MEP1B NULL meprin A, beta EMBV3_25190 CCATGGCACCCTTGGGATGCTGGTCCTAGTGTTACAGTATACAAAAGCTCAAAGTGAAGG Gene GeneID:616089|RNASE4:NM_001040590:100_cdna Constitutive 0 NULL GeneID:616089 10 GENE RNASE4 NULL ribonuclease, RNase A family, 4 EMBV3_18871 TGGTGGCCATCTCCTGCTCATTGCCTCACTTCCACTCTCTCCTACACACACTTCTGCTGA Gene GeneID:531878|LOC531878:XM_002707717:2_cdna Constitutive 0 NULL GeneID:531878 Un GENE LOC531878 NULL similar to olfactory receptor 355 EMBV3_08594 GGCTGCTAAGTTCCTGCTAAGTTGTTGACCCTGGAAATGAACTCTTCTCCCCTCTTCACC Gene BVT0102_070272 - 0 NULL GK000002.2:124982245-125014442 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106550 TCONS_00103736 TCONS_00106537 TCONS_00106534 TCONS_00106546 TCONS_00106545 TCONS_00106544 TCONS_00106535 TCONS_00106548 TCONS_00106549 TCONS_00106542 TCONS_00103735 TCONS_00106536 TCONS_00106551 TCONS_00106547 TCONS_00106540 TCONS_00106543 TCONS_00106538 TCONS_00106539 2 XLOC_062833 XLOC_062199 Coding TCONS_00106534 XLOC_062833 Coding Coding EPB41 2:125012612-125087561 j TSS78398 4213 1 TCONS_00106534_2 579 13 0.943961146394834 0.0113434844119644 0.0003536173664908 0.00145765646278612 0.00408143753851784 0.00274196030381567 0.00204018807468377 0.0013045230270942 0.00117947730107739 0.00057527342179312 2.76368919847401e-08 5.52774852583954e-06 0.000568722616833795 4.44621575927775e-06 0.00437787815926509 0.00279068487302419 0.0082121016007281 1.73987661536983e-07 0.00468817671383966 0.003456167385014 0.0026728189537149 0.00441336740368777 0.000613548323778434 0.000905159767099839 9.37223654302405e-08 0.014783291725983 0.00982913712819062 0.0050525197231722 1.1192696009449e-10 1.00530969495957e-09 0.0015666611521071 NM_174311.1 EPB41 Bos taurus erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) (EPB41), mRNA. 0.0 1772 99.80 0.23451222406836 XM_005245759.1 EPB41 PREDICTED: Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) (EPB41), transcript variant X7, mRNA. 0.0 3081 81.94 0.733206741039639 TCONS_00106534_2 sp|Q9N179|41_BOVIN 41_BOVIN Protein 4.1; 0.0 577 93.31 0.504317789291883 4 coding 0 0 0 0 -0.175088219507265 0.233027718755194 -0.153971042132588 0.037705073251906 GTCCTTTTCCATATATAATATTCTATTTTTAGGAACATGAAATACATCTACATATCTATTGGTCCATGACTCCAGCTCAGGCTGACCTGGAATTTCTTGAGAATGCCAAAAAGTTGTCTATGTATGGTGTTGACCTTCATAAAGCAAAGGACTTGGAGGGCGTGGATATCATCCTAGGTGTCTGCTCTAGTGGCCTTCTGGTTTACAAAGAAAAGCTGAGAATTAACCGCTTTCCTTGGCCCAAAGTGCTGAAGATTTCTTACAAACGTAGCAGCTTTTTCATTAAGATTCGGCCTGGAGAGCAAGAACAGTACGAAAGTACCATCGGATTCAAACTTCCCAGTTACCGAGCAGCTAAGAAATTATGGAAAGTCTGTGTAGAGCATCACACGTTTTTCAGACTGACATCTACAGACACCATTCCTAAAAGCAAATTTCTTGCCCTGGGATCCAAATTCCGATACAGTGGCCGAACTCAGGCTCAGACCAGGCAAGCTAGTGCTCTGATTGACAGGCCTGCCCCACACTTTGAGCGCACAGCAAGCAAACGGGCATCCCGAAGCCTTGATGGAGCAGCGGCCGTTGAGCCAGCAGACCGAACTCCTCGGCCCACCTCTGCACCAGCCATTGCTCCGAGCCCAGCCGCAGAAGGCGGTGTCCCAGGAGCGCCTGTCAAGAAAGCGCAGAAGGAAACAGTGCAGGTTGAAGTGAAACAGGAAGAGGCACCACCTGAGGATGCTGAGCCAGAGCCCTCGGAAGCATGGAAGGATTTAGACAAAAGTCAAGAAGAGATCAAAAAACATCACGCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAATCCGTACCAGAACCACGGCCTAGTGAATGGGATAAACGCTTATCCACTCACTCTCCCTTTCGAACACTTAACATCAATGGGCAGATCCCTACAGGAGAAGGAAATATAAATGGCATTCGCACCGAGGAGGTGGCTGCCGTGACCACGGGGCCATCTACCAACCCTGACTCTGAATGGGAGGGCCCCAAGCGTTCAGTAATTCCTAGTAAGAGCCAAATGACCGCTTCACCGGAGTCTCCAAAAATCTTTGACTTTGGCTCCCTCCCTGTAAGCAGCAAGGAGACAGAAGACAAGGAGCTGGGGGCAGCTGGCTCTCTTGATATTAAGGAAGAGCTGAGAGGTCCCAGTGGGGAGTGTGTAGGAGTGGAGGAACAGGCCAGTGCCTTACGGGCCTCAGTATCACCAGCTTCCTCCCAGCTGCAACTTGGTGAGAAAAAGGCAGAGAGTAGTGAGCAACGTGTTGCACCAGGAAAGCCACTTGGAAAGCAAAACGGATCATTTCTTGACTCTCGTGTGGGTAACCAATTCCCCACCCTCATTCGAAGTTTCCAGCCTCCCCTGGTGAAGACTCAGACCGTCACGATCTCAGACACTGCCAATGCTGTGAAAAGTGAAATTCCAACCAAAGACGTCCCTATCGTCCACACGGAGACCAAGACCATCACGTACGAGGCTGCCCAGACGGATGACAGCAACGGTGACTTGGACCCAGGAGTTTTGCTGACAGCTCAGACCATCACATCCGAGACCACCAGCAGCACCACCACAACTCAAATTACCAAGACTGTAAAAGGTGGGATTTCAGAGACTCGGATTGAAAAGAGAATTGTGATCACAGGAGATGCAGATATTGACCACGATCAGGTCCTGGTGCAGGCCATCAAGGAGGCCAAGGAGCAGCACCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAAACCGAAATCTCTGAGGAGTGAGCTCAGGAACTCTCCCACCCTCTCCCCCCAACCCCTGACCCCCTGCCCGTCTGCCATCCCAGAGAAAAACCAGCGGAATGATAAAGAAGCTAACCAGCAATAGTTAGACTTCAGACTTTTAAGATGATTGATTCTAAACCACCAGAAAATCAATTTCTTTTTCTATTTGGAGTTTATACCAAGAAAGTCTTCTAGACATCACTGATCCTTTTGAATACCTTTTTCTATATTGTGATACCAGAAATTGTGCAACTTTTCACTCTATGGACTGTTTTTAAAGAGCTTTTTTCTTTTTTTTTTTTTTTAAATGGGGTGGTTTGGAACCCCTTCAGACCAGCCCCTCCCCACTTACACTGACAGGGTCCATAGCATCCTGGAAATCCTCCAATGACACTGTCAGCTGTGCTGGGGGGACAAAGCCAGCTTAACGGGGCCTCCCCGATCCTCCCCTAGTCTATACTCTGTAGGCGACTGCAGAAACTTCATAAACCAGCCCTTCCTCAGAGCCAATGATGTCCCTGTACCAGAATGTCAGGCAGGGCGGCTGCCCTAAGGCGCAGGCCCTAGGCAAGTGCCCCCCATCCCTTTGCGGAGGTGGAGACTCTGCTCAGAATGCAGCGCTGTTTCCCTTCCTCTCCCCCAACTCTTTCTCTTTGGAGCCTCTTTAGATCAAAGACATAAGACGTTGCTTCAGACATATCTGATACTGTGAATGTTTGACTGTATCCGTGGCCTTCACCTTCCTGCCCTCCCTCCCCTCTTACCTCATCAGAAGCAGTGGCTCAGCTAAGAGCTCCCCCCGCCACCTCCCATCTCAGGAGACCAAAACTCACGGGGAAATAGGCACTTTGGGCCAGAAGCACTGATGGCACATTTTTACTGGTGATGTGGACAAGGCAAGCTGACGAGATTTTTTTTTTAAGGTTTTCTAGTTCTGGGAACGTGCACTTGACACGGGGGTGTGCTGGGGTTTGCCTCACTCAGCCAGATCTGCTCGGATGTATTTCCAGGAGACCACCCCTGGGCCTCTCTCTCTAATCCTCGGGTGACAGGGAGTGTAACCCAGCAGGCGACTGTGGTCCATGACCTTACTCCTCACCAGCGGCACCTGCTTGCAGATTATCCTTTCTGGAGCAGGGGGATGGCTTTCACGGGCCTCCCTCCCCACAAAACCTCCCTTGACAAAGGGGCACAAACACCAGCTCCGCTCATCCCCACTTGCCATCTGAGGTCTGTCCAGTTTCATGGCTTGATTTTTGTGGTGGGTTTAAGGTTTCTTTTTGTTTGTTTTTGAAAATGAGGAACTGATGTCCCCAATCCCACTATTCCTGGTAAAGATTTGGGGGCGGGGGGCATTTTTATTCAGTAGGCCTTCTCTAATCTTCCAGTAGACAGATCTGCCTACACGGTCTTAGAATCCTAAGTCTAGGACAGAAGGTCAGCTCCCTGAGGTGGACAGTGGGTCACACCCAGCCATCGCTGGGGGCTCCAGGGCGGTGAGCAGAGGCGGCTACAAGCCTCTGCTCCCCGCAATGGGACCCAGCAGCACATGCTTGGAGTCCACTGGCTGAACTTTGTCTCAACAGATGCAATTGGTTTGAACTGATCTCACGTGTGTGCGTTTTTCTCTGAGTCCTTCCTTGAGACTGTTACTAACCCACAGGTAGCTCTCTCTCTGGGCGGGGACAGGGAGGAGCTCAGGTAGGATGTGTCACCGGCCGTAGGGGAAGGAGAGCGCCCTGTCTCAGGAACAGACTGACAGCCTGGGAGTGTAGGTCTGGAGTGACGGGGCTTTCTGGGCGGTGCCCAAGCCAAGGGCTTTGTGACCCGGAGTGGTGGCGACCTTGGGAATCCAGCTCACATCAAGCAGATGTGCCAGATGAGCTTGCTTGCCAGTGGCCAGCTCTGCTGCTTGGAAGACCTGCAGGAGCCCAGAGCTGACACCTGTGGAATGGAGATGGGCAAAGGAAGAGGGCAGGGCACGTGCGTCAGGAATCTGATGCCCCTGTATCCCGTGATACCTGCTCAGAGTGGCTGCTTTCACAGCCCTGGACCACACATCGGGGGCCTGAACTTCCCCTCGGTCTGTTACCAGCTCACTTCACTTCTCCTTGCTTCCCTGACTATAAACTGGACCAGAAGATCTCCAATGCCCTGCCGCACTGTGAAGCCATGATATGGACAAGCCAATGCGAGGGGTATCCTCCCAAGCCTCTTTCACCTTCCTCCCTCTCTGGTTACCGAACTTGGTGTTTGGCGGTTGTTTGAATTTTTTTTTTTTCCTTCTTGCAATTGTGTGCGTGCGTGCGTGAGAAGAAAAACAGACTGTCCAGGTGGAAATGGTGAAGAGGGGAGAAGAGTTCATTTCCAGGGTCAACAACTTAGCAGGAACTTAGCAGCCATTTTCC EMBV3_04753 ATTCAATGTGACTACTGTTGACATGACCAGGTATCCTCACTTGAGTCCCAGGAACAAGGA Variant GeneID:532777|CLIC2:NM_001081727:11_cdna 409^534 3 EMBV3_35877 GeneID:532777 X GENE CLIC2 MGC148419 chloride intracellular channel 2 EMBV3_41607 TAACATGAAGAGCCAGAAGTCTAGAGGCTGAGTTGGGACAGGCTGTATGAATAGTAAAGC Gene BVT0102_261549 + 0 NULL GK000024.2:8785479-8846859 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138520 TCONS_00138515 TCONS_00138521 TCONS_00138519 TCONS_00138517 1 XLOC_084657 Coding TCONS_00138521 XLOC_084657 Coding Coding TMX3 24:8781541-8787443 j TSS103773 4298 1 TCONS_00138521_3 112 0.0621219171707771 3 0.272157261481105 6.21917686336951e-05 0.000471365421534393 0.000146734269827161 5.76841719255574e-21 1.14789753817017e-37 5.58061672425914e-30 1.73866165642155e-05 0.000272625302947542 4.2341901002049e-40 9.77204145673623e-06 8.85373435802411e-128 1.03927547309063e-51 3.90674494691791e-06 0.000109279530551021 2.07234358295034e-17 1.16113852506822e-53 0.000287186461581597 0.00107603622052591 0.00133556400481727 0.00104298527840917 0.000320527170445888 0.000719623323152272 0.0001102849530012 0.000951725327956579 0.00191910001030322 0.00132610864502041 0.00137555060086316 1.07255149388353e-08 8.28902080113054e-05 5.87260612474562e-05 NM_001102289.2 TMX3 Bos taurus thioredoxin-related transmembrane protein 3 (TMX3), 0.0 4037 100.00 0.520474639367148 NM_019022.3 TMX3 Homo sapiens thioredoxin-related transmembrane protein 3 (TMX3), 0.0 1710 71.39 0.806421591437878 0 coding 0 1 1 1 1.2974878728101 0.0480484035153553 -0.011077644068433 0.846894253367397 ACGTGTTTTCAGAGGAGAGTCAGACTGTGTTCATACAGGAGGACAGAAGCAGGGAGGGATGGAAAGAACAGGAAGGTTTACTCCACAACTCTCAGGCCCAAGGAGGTGACAGCATTTTGCAGAGATTGAAACGAATAGTATTTGATGCCAAATCTACTGTTGTGTCCATATTCAGGAGCTCCCCGCTGATGGGCTGCTTCCTCTTCGGCCTGCCCCTGGGCGTCATCAGCATCATGTGCTACGGCATCTGCACGGCCGACGCGGACGGCGGCTACATAGAGGAGCGGTACGAAGTGTCCAAGAACGAGCCCGACGACAGCCCGGAGCCGGCGGAGCGCCCCGAGCCCCCGCAGCCCAGGGGCGCGGCGTCTCCGCTGCCCGCCCCGCAGGAGCCCAAAGACGTGCTAGAGAAGAAGAAGGATTGAGACCCGGCTCAGATAGACTGTTCCATAGGATTTCACATTATTAAAAGAGTCTATTTATTGAATTTAGACATTTAATCATGACCTTTCCAGAAGAGAACGTGGTATTTGTATTTTGCTAACATCAACTGCATGGGTTATAAAATAGTCCTTCCACAAACGGGGAGATGTTTGGAGCAAAGAGATGGGAAGTTTGTCCCAGTCAGTCAGTCAGAACACTCCGTCAGAGTTTACCTTGGAGATGATGTTCCACCAGACCAGCTCCATTTGCATGTTTCTCTATCTGAATATTCTGTGACAGAACTAAGATTCTTGGGCAGAATATTTAAATCGGCCAGTCAGGTAGAAGATACATGTGTGATAGAGAAAAATAACACCTCCACCTCCCACCATGCATTCTCCTCTGTTTTGGATAAGATTTATATGGACAAAATTAAGTCTTTGAAATTTAGGCACTTTAAAGAGAACTAGTAACTTTTTCCAAGGATCAAATTAAGATTATGAGATAATTTGGTTTTATATAGCATAGTGATTTTATTTTGTTATTATTTTTAAAGGAGAGGAACTGTTACTTTTTACCTTTATACTCGGTTGCATTATAGAACTTTCATAGGGGCCTATAATGTGGGCCTATATTGTCTTACGTTTAATCTTCACCGCGTAAACAGGATTTACTTGGATCAGTGATTTCAGATGATGGCTCGGACACTGAGTCAATGTCTCAGCCAGCGCTGCGGGAAGGGCAGGGCTCTTTGTTACTCCTGCCTCCCCTGCTTTAGCCAGAACAGCCTACTCTTGTTTCTCTGTTTTATATATTGGCATTTCATCTAAAAATTTTCTCTGATAAAAAGCTCTTGCTGCTTAGTAATATATTTTTATGTTTATGTTTAGTAACTTTATGGTAACTTACGATCTAATGTGTGTGTATGTGGGTGTGTGTATATATATACACATACATATACACATACAGAATTTACTGACATCTGTTATGTTATGCTATGGGCGTGCCTGTTCATAATGAGTGACATAATCAGCCTATGAAGAAAATTCACATCCGGTGAGTAGAGATCTGCCAGTTGCTCTCTCCATCCTCCCAGGTGTTACCCATTTCAGCCAGTGACCCTTCATCTCTCCATGATGGAATAACATCGGAATTCTATCCTAAGTAATGAGCAAAGTTGGTTTTTTTTTTTAAATAATAGTATGGTATGTTTATCATAGATTAGCTTATTTTTGAGACCTTTATTTTTGAACTAAGTTTAGGATTTTTATTAAGTGACTAATTTGAGTGGTTATTCATTGAATTATTAAACATTTTAAAATGTTTCATCACTTTAAAAGTATGTAATTTATGGTCCTGATACTGAAGCTGTTCAGGGCTGCGGTCCCCAGGGCAGCCTAGGGTTATCTCTGATGCCATGATCACCACTAATCTGAAGCTCTTGAGTCTTAAGTCCTAAGGAGTCACCTGTAATTGCTTTCTTGTACCTTTTAGTATATAATAATTATTTATTCTTAAATTTGGTACTTCATCATTACCATTTTTATAATGGAAGCACATAGGCAGTCACAGGAAATTGCAGGAAACACTAGAATGAAATGGTATTCTTAAATGGAAATTGAATATAGATACTGTTAATTTAATAAGGAAATTTCTCTCTAACGAGTAACAAGTGAGTCTTTTGGAAAATAGGTATGAATAGGCTTGTTTTGTTCTGTGTGTGTGAAAGTCTTGGTTAGACACAGATCCTCGGGCTCAGCCTGGCCGGGAAGTTAGAGCTTAGCCACTACCAGCGACAGGAGGAGGTTGCGAGAATGTCACAGCTTTTTTCTTCATGTTTATCACTATCAGGTCCATCATCGGCGTGGTTTTGTCTTTTGTCAAGCACACCTGTAAATTAAACAGCAAAAGAGGTAAGAGGAAAAGAGCAAAGCTTAGTAGGTATCAACACAGTTCAGTGACGTTTGTATTCTGAGATTTTTCTCATCTATTAAAGCCTTAGTTCTTTGTTACCTTTTTCACAACTCTGTACTGTTGCCTCATATTCTGTTTGTGTTTTCAAAATGTGATGTTGGGGAAACAAAAAGTATAGATGGTTTGTAAGTGATTTTTTTTTTTAAATTTTGCTTTTTAGTTGTTTAAGATAACTGTCACAGTATCCTCACAAAACAAATTGAAAAGTTTTGCTCACTAGTATGGTTTTCCCTTTAGTGTGATAGCAGAGTTTACTAGGAATGCTGTTTTCATTTTAGGAAAAATTTCTTCAAAATAAAGGTAGGTTTCTTAATGAATCTTGTAGAACATAGATACACTGAACATCCTAATTCAGTGACAAGTCTTACTGTGATCATGTCAGTAGGGGGAATATCCTTTAGTAAGTTGGACTTCTGCCTTCTCTTTCAGTTGCAATAAAGTTCTCTTTCTAACTTCTGAAATCCAGGATCCTAGATGCTTGCTGTTGCTTAATCTGGTGCTCACAGTTTTTAAAGATGTTTCAGCGAGAGTTTTTATCAGCAGCACACTTCATTATAGCTGGCAGTCCTTTTTGCTTCATTGTATGCATTAATAGTTCTGAAACTGCCATCTGAAATCTAGGTGGATTAGACCGGGGATTTCCATTTTCTTCTTCATACATGTGCTCCCTGGTGTCTGAAGTAGAGATAACATGAAGAGCCAGAAGTCTAGAGGCTGAGTTGGGACAGGCTGTATGAATAGTAAAGCAATTAGTTACACTGTTTTTATTTAGCGGATATTTGTTCTTACTGTTTCTTGTGTTTTGTTTCAGGGATGTTTTTTATTTTTCAAAAAGTAAATATTTTCATCATCACTTCATATGATATGGAGGTAGGGCAGGGAAAAATCACTCAGCTATTCTTATTACACAGAGGTTATTCTGACAAACTGATATCAGTTCATTGGTGGGATTATGTTTGCCATTTTATTTTTATAAATATATATTTTTTCTGAATGTGTCTGAGTCCAAGAGTGGGCAGAAAATAATTTTCTACTTTGGACTAATCTATAAAGGTTTTTGAAAGTCTGTATTATTAATACTAACTTGTTGAATTCATGATCTCCTGCCTTAAGGCACCAATTGTAAACCTTCGTTTTTCTAAATAAATTAATTGAAAACATGTAACCATTTTATTTTTACTATTTATCTTTTGGTTGTCTGGGATGTAAATTTTTCTCTGTGCAAGCAAAAAGGGCAGTTGAGACTCATCTTAAACAAAGTAATTTTTTTCCCCCTCTTGTTAATTGTAAGTTTGTAATTATAGAAACATAGTTTTTAAAAATTTAAAGAAATTTGATAGAGATCAGGTTATAATTAATTCTTTAATATAGAAGATGAAAAACCTGAGATTCATGAGTTTGATATATTTTGTATTTGTAAAACCTGATTATATTAAGTATTAATTGCAGAATTTAAAGCTAGAATAATTGGATTTGAGTCCTTGATCCAACTGCTAAATTGTAGTCTTAGACCCAGCCCCTCACTCTCACTGTCAATAAAGTGAAAATCTAGAACCTCAAGGTTTCTTCTTTAAAGTAGCATCAAATGGGGAGAGTGTATTATTGAAAAAACAGAACTTTATTTTGATCATGCATTTTTCACACTGGATACACTATGAGCATATCTCTTAATGAGAATGTCTCTGGCGCAGGAATGACCCATCTGTGTTCAGGCTGCCACGTCCAGGCCGTCACCAGGCTTCACTGCTCCAGCCTTCCTGACTGCAGCCCAGCATCAAAGGAGCAGCAAAAGGTGTCCTCTTATAATTTAAGGGGGATCGTGGCATTTATCTGCTCATAAGATTCCAATAGCTTCTCTCATTCGGCATTAATAGCCATGTTACTGATTGAAATATGTCCCC EMBV3_09185 GGGTGGTAAGAAGACTGTGTCTCAGAGAAGAAGCCACACAAGACTTAGCTCAACTAGGGG Gene GeneID:507315|NUDT17:NM_001083383:65_cdna Constitutive 1 NULL GeneID:507315 3 GENE NUDT17 MGC140296 nudix (nucleoside diphosphate linked moiety X)-type motif 17 EMBV3_07141 GGCATCGTGCTTGAATCACCAGCCTCCGATTCTTCACAGAAAAATATTGCACTGCTAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27150 TCACCGTTTTGACTCTTATCCGACAACAAGCCGCTCTTCAGACAGTAGGCTTTTCCGACG Gene GeneID:514762|APBA2:NM_001077921:85_cdna Constitutive 0 NULL GeneID:514762 21 GENE APBA2 MGC142458 amyloid beta (A4) precursor protein-binding, family A, member 2 EMBV3_05118 AGTGCAGGAAATGTGGGAAAGCCTTCAGTTGCATCTCTAAACTCATTCAGCACCAGAAGG Gene GeneID:789374|LOC789374:XR_084187:302_cdna Constitutive 0 NULL GeneID:789374 18 PSEUDO LOC789374 NULL similar to Zinc finger protein 154 EMBV3_42800 GATGAACTGGTCACCCTGCTGTCGATCCTGCAATTTACAAGTAGCCAAGCCTGCGGAGTC Gene BVT0102_114807 + 0 NULL GK000014.2:15469511-16152553 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00055009 1 XLOC_032818 NonCoding TCONS_00055009 XLOC_032818 NonCoding NonCoding - 14:15845562-15845967 - TSS40686 405 0.269135802469136 1 0 0 0.000421786125181768 0.000251342213689674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0012040075684792 0 0 0 0 0 0 0 1.44670369788133e-05 0 0 0 0 noncoding 0 0 0 0 0.0615066968690105 0.618167983635171 0.0500610134768383 0.335283629095305 GGATGGTCTGTGGTCCAGCCTCTGTGCCTCCAATTTAGCTGACCCTCACATCTCTACTGCATTTCCTGGGGCTGCCCTCACTCTTCCCACACCACTGGCCTGCCTCACAGGGCTTATTACATTACGGCCAATTAGATCACCAGCCTTCCCTAGGGTGACCAACTCTCCCATTTGCTTGGAACTAGGAGCACTGTGAAAGCAGAACTTTCCATTTTAAAACCAGAAAAGTTCAGGAAAAACCAGGATGAACTGGTCACCCTGCTGTCGATCCTGCAATTTACAAGTAGCCAAGCCTGCGGAGTCCTGAGGTCACGACTGTTTCCAAGTCACTTTTGCCGTCTCTGCAACATTTATCTCTGGCAATTTTGAGTTTGCAAATAGCTTTTAATCCTTAACACTTCCCCC TCONS_00051381 . 3' 375962 TCONS_00051381 . 3' 376366 EMBV3_38573 TCACACTAGTACAGACAAGGCTTCCACTCTTGGTTGAGCAGCACACTTTTCTACAGCCTG Gene BVT0101_068984 + 0 NULL GK000010.2:12448222-12469672 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21822 TAGGGCAGGAGACCACTGTAAGAATACTCTGGTCGGCATTGGAATGGTGGGGAGGTTTTA Gene GeneID:615090|TMPRSS5:XM_002693014:235_cdna Constitutive 0 NULL GeneID:615090 15 GENE TMPRSS5 NULL transmembrane protease, serine 5 EMBV3_36827 AATGCCTCAGTGACAGCGCCATCTTTGTGCAGTCTCCCAACTGTAACCAGCGCTATGGCT Gene GeneID:515125|SMAD3:XM_002690477:400_cdna Constitutive 0 NULL GeneID:515125 10 GENE SMAD3 NULL SMAD family member 3 EMBV3_16226 CTTCATGGAAAACATCGTGTTCTGTGGGATGAGTGGCTTCTCCGACTTCTACAAGCTCCG Gene GeneID:618703|LOC618703:XM_002697889:468_cdna Constitutive 0 NULL GeneID:618703 25 GENE LOC618703 NULL hypothetical LOC618703 EMBV3_14476 CAGACGTGAATGTGAAGGACAAAGACGGGAAGACCCCTCTGATGGTGGCTGTGCTGAATA Gene GeneID:445423|FANK1:NM_001003904:18_cdna Constitutive 1 NULL GeneID:445423 26 GENE FANK1 MGC134451 fibronectin type III and ankyrin repeat domains 1 EMBV3_09371 GGGGTGGGGGAGGAGAAGAACAGGAAGAAAGGGAAAAAAGAAATACTCTGAATGGCTCCA Gene GeneID:541305|NR5A2:XM_002694274:286_cdna Constitutive 2 NULL GeneID:541305 16 GENE NR5A2 NULL nuclear receptor subfamily 5, group A, member 2 EMBV3_13196 GCCGCGATCAAGAAGCTGTCCGGGCCTCTCATCTCCGACTTCTTCGCCAAGCGCAAGAGA Gene GeneID:510972|CDKN1C:NM_001077903:260_cdna Constitutive 0 NULL GeneID:510972 29 GENE CDKN1C NULL cyclin-dependent kinase inhibitor 1C (p57, Kip2) EMBV3_20122 TACTACGACTCGAACCTGCTGGAATGCGTGGACGTGGACGAGTGTTTGGACGAGTCTAAT Gene GeneID:532772|LTBP3:XM_002699343:216_cdna UTR3_Alt 2 NULL GeneID:532772 29 GENE LTBP3 LTBP2 latent transforming growth factor beta binding protein 3 EMBV3_40427 TTGTGACATAGATCAGAAGTGGGGGAGCTGAACCTGCCTCTGGGTCTTCACTGCCTACCT Gene BVV0101_082757 + 0 NULL GK000030.2:19057863-19094775 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22058 AAGCCTTGATCGTCCACTATCGCCTGGACTTTTGCAATCATCTCCAGTGGCTACGCTGAC Gene BVV0102_389503 - 1 EMBV3_08172 GK000026.2:37870246-37895866 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28389 TGGCAGATGGGACTTCCCAAGAAGAGTGGTAAAAATGGATATTTATGGGGAATATTTAGC Gene GeneID:526123|ZNF304:NM_001102098:49_cdna Constitutive 0 NULL GeneID:526123 18 GENE ZNF304 MGC165678 zinc finger protein 304 EMBV3_14240 GATGGTGCTTCCACCTCAGTTGTTTCCCTGCCTGTTTATGATTCCACTGTTCTCAAATAC Gene GeneID:522248|DONSON:NM_001083445:37_cdna Constitutive 0 NULL GeneID:522248 1 GENE DONSON NULL downstream neighbor of SON EMBV3_19255 ACCAGTGGGGGATGGAGAAGATGTAGTTGCTGACCACCCTGAGAGCTGCCCTAACTCCCT Variant GeneID:282462|MEA1:NM_174648:216_cdna 348^621 1 EMBV3_36847 GeneID:282462 23 GENE MEA1 MEA male-enhanced antigen 1 EMBV3_40451 TGTGAATCTCAGGAGAGAGCAGCCAGAGTGGTTGGGCTCATGTGGTTTGTGCCCTGTATA Variant GeneID:790884|MLLT10:XM_002692123:38_cdna 272^326 1 EMBV3_07755 GeneID:790884 13 GENE MLLT10 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 EMBV3_15799 GGCAGATCACGACCGTTGAAGAACTGGAACCAAAAGCAAATAACTGCACCAAGGTCCTCG Gene GeneID:541595|B3GAT2:NM_001014392:4_cdna Constitutive 0 NULL GeneID:541595 9 GENE B3GAT2 NULL beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) EMBV3_30422 AATCCCCACTCACCGTCCAGTGCTTTGCCCACAAGCTGCTAAATTTTTTGACCTGACACC Gene BVV0102_204918 + 0 NULL GK000003.2:100223304-100285747 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174216 TCONS_00174217 TCONS_00174219 TCONS_00174220 TCONS_00174218 TCONS_00174215 1 XLOC_104555 Coding TCONS_00174215 XLOC_104555 Coding Coding LOC513210 3:100284780-100295058 j TSS129339 1677 1 TCONS_00174215_2 162 0.119260584376863 6 0.837403911647368 0.000121274792030309 5.39709685729803e-05 0.000281744675357994 0.00025464628332923 0.000144935695889154 7.91413228082785e-05 0.00017196407608879 5.90478923960033e-05 0.000368531392687299 0 0 0 0 6.15635706540271e-05 5.94257932817999e-96 0 0 0 1.44860376632867e-07 0.00212167629868114 1.24869141276406e-31 0 0 0 8.65834395089355e-14 5.06908929344435e-12 4.98820900520542e-05 0 3.56513054512315e-06 0 XM_005197902.1 LOC513210 PREDICTED: Bos taurus fatty-acid amide hydrolase 1-like (LOC513210), transcript variant X1, mRNA. 0.0 2726 100.00 0.900417412045319 NR_045483.1 LOC729041 Homo sapiens fatty acid amide hydrolase pseudogene (LOC729041), 3e-130 470 83.05 0.27906976744186 0 coding 0 0 0 0 -0.17679333258308 0.36187409028423 -0.0119437760795792 0.851148574079734 GTGGCAGCCTGAGCCCTAGGTGGGGAGCTGCAGGCCTGGGCTCCTTTGGTGCCTCTGGCTCCTTGTGTGACGGAGCCCCGGGCTAGCCAGAGTTTAGAAAGGTTGTGTGGAGTAGGGACACCCAAGAAACTGTGGGAGCAGCACACAGCAGTGGAGGAATATCAGCAAGAGTTCATAGCCAAGTGGAGGTCCCTGGACCTGGATGTGCTGCTGTCTCCAGCTCTGGACCCCGCCTTCTATGTTGGCTATCCTGCCAAGGTGCAAGCAAGCAGTTTCTACTTGGGCCTTTACAACCTCCTGAACTTCCCTGCCGGCGTGGTGCCTGTCACCACCGTGACGCCACAGGACGAGAAGGAACTGGCCTTCTACAGAGGCTACTACAGAGATCACGTCGACAAAAGTTTCCAGGAGGCGGTGAGAGGATCTGTGGGGCTTCCAGTGGCTGTGCAGTGCATTGCTTTGCCATGGGAAGAGGAACTGTGTCTCCGGTTCATGAAGGAGGTGGAGACCTTGGTCAAGAGCAAGATGGAACCCAAGTGAAAAGACACTCCTTCTCCTGGAGGTCTTTCTACATCTTCATCCAAGTCTGCTCTCAATGTTCCTTCCTTCTCATGAATACCAGATCCGCCTTATTTCTCCTCCTCCTGGAAGCCCACCACAAGTTTTCTTTGTTGTCTCTCTGTGTGGCTGCTCAGTACACAGACTTCCCAGATTATCCCAGCATGGGGAGCAGGGTGATGTGTTCAATAAACATTTTGACTGGCTGGCTTCGGGATCTCTGGTCTAGATGGGGAGGTAGGGCTGTAGACTTCCCATGGCCTTCTACTTCCAGCTGCTGTCCTCCAGTTCAGTCTCTGAGATGCTATCCTAGACTGCAGCAGAGGGGAGAGGGCCCCAAACTGAGAGCTTGGAGAGCTGGTCCAAATCCTGGCTCTGCCACTGGTTTGGTCTAGGCAAGTTATTTCCCCTCTCTGGACCTCAGTCTTATCATCCACACATTGAGGGGGTTAGATTTGATGTAGTCTGTCCTACCTGCCAGTACTCGACTATTATGGGAGAGGTGATTCCTAGGCACTTTTCTGATCGAGAACTTGCCATGGCTCCCACTTTCTAAAGTTCCATAGAGCAAGGCCATGGGAGTGAAACCAAGTCAGAACAGAGCCTGTGTTGGGAGTTAATCCCCCACTCACCGTCCAGTGCTTTGCCCACAAGCTGCTAAATTTTTTGACCTGACACCCAGCACCTCCTGAGGACCTGTACAGCCTCTTTTGGTGTGGCTCCACCACAGCGTAACCTGCCTCCATTCTCTCAAACTGGAGCCTTCTTGCCAGTACAAGGTGTGTCTGTGCCTCTGTTCATACTGTTCTCTTCAACTAAACGCCATCACTGTCTTCACTGCCCTTCAAGTCCTATGTCAAATGTTACTTCCTCCAGGAAGCCTTCTTTGAGCCCTCAGTCTCCTCCATGATTTTACGTGCACCTAAACTCTCTTGAGGTTCTCCCCCAACAAAACTTCCCCTTCCTGTATCCCATTCTTCTTTGTAGCCCTACTTCCAATCAACTAGGCAAACTTATGAACTCATTCCTCCCTGTGCTTGATAGCCCAGACCTCCTGGAGATAATATCCCAGTGCAAATAAATGGAATTCATCCATCCATTCATTCATTCTACATTTGT EMBV3_17719 CAGGGTGAGCTAACTGGAGCTGGGAAAGCCAGGACCCACTTGACACTCTGGTTTAAAGAT Gene GeneID:512899|ANKRD40:NM_001075586:103_cdna Constitutive 1 NULL GeneID:512899 19 GENE ANKRD40 MGC139105 ankyrin repeat domain 40 EMBV3_07154 GTGATGATGCATTGGAAGCAAAGACATTCACGCAGCCGTCCTTATCCCGTGTGCTTTAGG Gene GeneID:768059|TCEAL8:NM_001077116:51_cdna Constitutive 1 NULL GeneID:768059 X GENE TCEAL8 MGC127842 transcription elongation factor A (SII)-like 8 EMBV3_17789 TGACATCCTGGACACAGCTGGGCAAGAAGACTACGCTGCCATTAGAGATAACTACTTCCG Gene GeneID:538477|RALA:NM_001034644:46_cdna Constitutive 0 NULL GeneID:538477 4 GENE RALA MGC126951 v-ral simian leukemia viral oncogene homolog A (ras related) EMBV3_23540 TTGCTGATATGTGACTGTGTGTTTAGGAAATCTAAGAGGCTCTAAGTAAAACCTATTAGC Gene BVV0101_039240 + 0 NULL GK000015.2:52627366-52661472 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061708 TCONS_00061711 TCONS_00061713 TCONS_00061712 TCONS_00061709 TCONS_00061710 1 XLOC_037127 Coding TCONS_00061708 XLOC_037127 Coding Coding CLPB 15:52656244-52746959 j TSS45909 6745 1 TCONS_00061708_2 475 0.350778354336546 13 0.925788742641709 3.98715265371914e-09 9.40669157717751e-38 0.00015120645514163 3.79734226774656e-05 6.64640732377925e-05 1.43282543920126e-05 4.12049920505727e-08 3.38615390792494e-05 0.000170930247589092 9.20826527308384e-08 2.3559330329938e-05 5.31172319987065e-06 8.44833020947272e-05 8.96170594979681e-05 7.51451654331749e-05 0.000782039781272073 0.000836542525584743 0.00203374476182315 1.77816248368827e-16 2.6854807229614e-09 3.27589601513492e-06 0.000429147178696514 0.000567685464257068 0.000656321755526985 1.02258486871684e-17 9.80882389529376e-08 0.000135732923077257 9.81615059567864e-10 0.000151094352565629 0.000164181723703573 XM_005216186.1 CLPB PREDICTED: Bos taurus ClpB caseinolytic peptidase B homolog (E. coli) (CLPB), transcript variant X2, mRNA. 0.0 2639 99.93 0.217197924388436 NM_001258392.1 CLPB Homo sapiens ClpB caseinolytic peptidase B homolog (E. coli) (CLPB), transcript variant 2, mRNA. 0.0 2507 84.06 0.342475908080059 TCONS_00061708_2 sp|Q5E9N5|CLPB_BOVIN CLPB_BOVIN Caseinolytic peptidase B protein homolog; 0.0 965 99.79 0.978947368421053 9 coding 0 0 0 0 0.0516929311454402 0.727240779924776 -0.0125801754523349 0.786240129359694 TTCTCCAGAGGAAGGAGCCAATGTGCACATTTATCAGGGCTTGGTCACATCTGTTGGAAGTCCTGGTCACCCGAGAGGATGACTTCAACAACCGGCTGAACAACCGCGCCAGCTTCAAGGGTTGCACAGCCCTACACTACGCTGTCCTCGCTGATGACTACCGGACCGTCAAGGAGCTGCTTGATGGAGGAGCCAATCCCTTGCAGAGGAATGAAATGGGACACACACCCTTGGATTATGCCCGAGAAGGGGAGGTGATGAAGCTTTTAAGGACTTCTGAGACCAAGTACCAAGAGAAGCAGCGGAAGCGGGAGGCCGAGGAGCGGCGCCGCTTTCCCCTGGAGCAGCGGCTGAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGCGCAGCGATCCGGAGGAAGGAGAATGGCTGGTACGACGAAGAACACCCCCTGGTCTTCCTCTTCTTGGGATCATCTGGAATAGGAAAAACAGAACTGGCCAAGCAGACAGCTAAATATATGCACAAAGATGCCAAAAAGGGTTTCATCAGGCTAGACATGTCTGAGTTCCAGGAGCGGCATGAGGTAGCCAAGTTCATCGGGTCCCCACCAGGCTACATTGGCCACGAGGAGGGTGGCCAGCTGACCAAGAAGCTGAAGCAGTGCCCCAACGCCGTGGTGCTCTTTGATGAGGTAGACAAAGCCCACCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGCAAGACCATCGACTGCAAGGACGCCATCTTCATCATGACCTCAAACGTGGCCAGTGACGAGATAGCACAGCATGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGGATTGCCGAGAACCTTGGGGACGTCCAGATCAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAAAACGTGATTCGCCCCATCCTAAAAGCTCACTTCCGGAGAGATGAGTTTCTGGGACGAATCAATGAGATCGTCTACTTCCTCCCCTTCTGCCACTCGGAGCTCATCCAGCTCGTCAACAAGGAGTTGAATTTCTGGGCCAAAAGAGCTAAGCAAAGGCACAACATCACTCTGCTCTGGGACCGTGAGGTGGCAGACGTGTTGGTCGAAGGCTACAATGTGCACTATGGCGCCCGCTCCATCAAGCATGAGGTGGAGCGCCGAGTGGTGAACCAGCTGGCGGCTGCCTATGAGCAGGACCTGCTGCCGGGGGGCTGCACCCTGCGCATCACTGTGGAGGACTCGGACAAGCAGCTGCTCAGGAGTCCTGAACTGTCCTCATCCCAGGCCGAGAGGCGTCCCCCCAAGCTGCGGCTGGAGATCATCGATAAGGACAGCAAGACCCACAAATTGGACATCCAGGCACCACTCCACCCTGAGAAGGTGTGCCACACCCTCTAGCGTCTACCTACCTGCCCATACGTGCCCTCAACACCTAATAAAGCCCCCTTGGCTGTGGCATGGTGACCGACCTACCTTCCCCTCCTGCTTCTCACCCCTCTGCATCTAGCCTAAGGCCTGTTACCTCCTCACAGCCCCTGGAAGATGCCTTCTCAGCCCCACCCTAGCCCCTTCATTGTGGGGCCCACATGTGCTCCTAGGTCTCTGGGAGGGGAGCTGCTCCTCTGTCTGCTTTATGGCAGGGAGAAGAGGGAGTTCCCTCATCCCTGTCCTTCAGCGTGATCCTCATGTCCCAGAGCCTCTGGAACTTTATCATGTTTTCTGGAAGCTCAGAAGTATGGCAGCTGAGAACAGATCTGGCTGGAAGAAGACAGGGACCAGGCTGTGACCTGCTACCCTCTGCTGGCTCTCATGCTACTGAGTCCCCAGAATGTCTCCACAGGGAGCAGAGAAGTCAGAGGCCCAGACACAGAGCTTCTGCATTTAAGCCATTGCTTCCTCTTTCCCATGCCCTAGAATTCCAAGGGGAAGGGACTCTCGGAACCCTTCCCCCTTCCACTGCTCTGTCGTAGCTACTATTCCTCCCTGCCCCACGTTCAGGGGTCAGACCAGACCACGTCTCTCCAGCCTTGGAACTAGGCCAGCATTGGGCATCTTTAGGAAGAAGGCTGGGTACTACCCTACCCTACACGGGGCCTGGACAGAAGCACCAAATGACCAAGCAAGCTTAACTCTGCAGGGCCTCTTGCAGGAGACCAACAACATAGACAGTGGAGAACTGTAAGGGGAGGGATCCTTGGGTTGGGCTGTACCCAGATGGCCATGGAGTCTGCCTCAGCCCCATCTATACTGTGGTCCTAGCTAAGTGAACATGGGATAGACAGCTCCCTCATGCAGTCTGCATGCTAGTCACTAAGCAGAGGACTGCACACCATCCCCCAAGGCTTTCCACACACCAGGCGTGTTCGGCCTCAGCTTAATTAGCAGGGCACAGCAAGGCTTGGTACGTACATCCTTGGGAACCATCTGCAGTAGCCACCATTGAGGACCATGCCATCAGCCTCCCCTGAAGGGCCACTTTGGAAACCCTCCTTTGGTGTCAGAAAGTCTCTTCCAGGAAGCAGAAAATGGGGACAGGAATCACAGTCCCCCGAGTGGTGGAGGAATATCATGACACGGCGGGTGGGGGGCAGCCGGAAGCTGGAACATGGGCTCCAGCAGATGCTGCAACAGGCACCATCCAGCCCCTCAAGGAGCTGTCTGCCGCTTTGTACCTCAGTGACTGCCACTCTTTGTTTATTTATTAGTAGCAGTTTTTTTTGTTGTTGTTTTACTGCTTGTTCTGAAATAATTTTAGACTTACAGGAAATTACCACACAATAGTAGAATTCCATGCACCCTTCATCAACCATCTGTTAAAAATTATTAAATTATAATTATTAAAACCAGGAAATTAACAAGATATGGTACTACTAGCTCATCTCTAGGCACTCAGATTTTGCCGTTTTTCCCACTGATGTCCTTTTCCTGGTCCAGAATCCAGTCGAGGATCCCGTGTTGCGTCTTGTTGCGTTTCCTTTATCTCCTTCAACCTGTGACAGTTCCTCCATCCTTCTTTGCATTTTATGATCTTGACACTTTTGAAACCTCCAGGTCAGTTAAATTTGTAGAGTGTCCCTTAATCTGAGTTTGTCTGCTGTTTTCACATGCTAGATTGAGGGTCTCCATTTTGGGCAAGACTAGCCCTCAAGTGATGCTGTGCCCATCCTTATAACTCAGAGCAGGTGATACCTGCTGAGGTTGTGTATACCAGTTCTCCACTGTAAGATTACTAATTTTCTCTTTGAAATGAATAAGAATCTCATGGAAAGATAGAAACTGTACAGATGTCTTATTTATCCATAGAATTTTGCCCGTTGATTTTAGCATCCATCATGTAAATGTAAACGCGTTAGTCACTCAGTCATGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTGCCAGGCTCCTATGTCCTTGGGATTCTCCAAGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATTTTCCCAACCGGCTCTTGCTTTTAACAAACATTAATATTATATTTGCCTAATGATGACATTGTTTTCTTATTCCATCTATATGTATTAATTGGTATTCTTCTGTAAGGAACAGCTGTCTGTTTTCTCCCATTTATTTATTCAATAATTTACCTATAAGTAAAAACTAATGAATACTTGTTTTAGTCTATGGGTTGTAGCCTACTAATAGTACTAATAGAATTTATTTCATTGCTCATATGGCCTAGATTTGGCCATTGGGAGCTCTTGAGTTGGCTCCTGTGTTGTTTCAATGTTGCCCCATCATTTTTTTAGTATTACCTTATTTTCTGGCACCACAAGGTGTTCCAAGGTTACTTACACTTTTCTTGTCCCAGCCCTGACTTCAGCCATTTCTCTAAGCAACTCCTGATGCCTCTTATTTGAGAATGGTACTTAGAAACCAAGGTGGTATATTCATTGCTCCTGGAGTATCATTGCTTCTAGGCCTTTTCAGCACACAAAGCTAGGAAATAAATATATGTGTATATGTTAACACATGTGTCACACACAGCTGAATTTATTACTAATCTGTCCATCTGTATATTATTAAAAACCATGAGTCCATATTGATGCCTACAAGTCTAACCCCACACCACAGGGCTTGCCGTTATTATTAGCACTTTACGATTCATTCTCTGCTTCTTCCTCTCCTGCTATTTCTGTTTCTTCTCTCATTCTGTTTTCTGTTCAGACTCCCATAGAGGCTCTAATTAAGTCAGTCAGTGACCATCCTGTGTAGAGCACTCCTGTTGGATAAAGTTCTTATGCCCAGCTGTCCGTCTCTTGGTTCAGTCAGCTGTGGCCAGGACCAGCAGACATACAACTGAAAACCAGATAGCTTTTATACAGGAAAACCCAATGACTACCTTTCTGAGAAGAGAATAAGGGACAGAGTAGACCTCCGATTCTAAGAAGCTTGAATATCACTTCTAGAGACTCAGCTGGGCCTTGTAGGTGGTGTTGGACGCCTGCCTTATACTTTCACAGCATCCTCGACAGGACTTAGCTCAGTTGCATTACTTGTTCTGTGTTTGCCTTTGTCATTAGAGTGTAAGATCCACGAGGGCAGATACCCAGTTCTACTGACTGTCCTGTTCATAGAAGCTGGCACAGAGCCTTCACATGATGGCTGCTCCAGGTGTTTGGATGGATGGGTAGGCCCTGCAGCAAGCACGGATCTTCACAGTGAGGCCCAGGACACAACAGTATCCTATGTTCGTGGAGCGAACATTTGTCATGTGCTTGTGGCCAGGCAGCAGAACTTGAGAGGAGAGGGCAAAGTAAGACCCCAGACACCTTACTGAGTATCTAGAAATACATGAGGCTGGACTTGGAAGTAAAATACCTTCATTGTTCAAAAGGAAAAATTCAAAGGTGCTTAGTGATTGTTTTAGGAATTTAGAAAAAAAAAAACATTTAAACCATAGGAGAAAAGATAAAACCTGAAGTTAAGTAGAAATGCAAAAAAAAAAAAAAAAAAAGGATCAGTAGAAAATGATTCTTTTTGAAAACACCAATAAAATAGATTTTCTCAGTCTGATAAAGGGGAAAAGTGGAGGGGGACAACATCAGACATAATCATATATATGGAAGAGTTTTAAATAATTTTAAGGTAAGTCTTGTGGCCACAATTTTGAAAACAGAGCAGATAGATCATTTCCTAGCAAATACTAACCCAAGATATAGTTTGAATAAGCCAATTAATTACCAAAAGAAGAAATTGGAAAAGTGATTGCAATTTTACCCTTTTAAAAGATTCCTCTTTAAACTTTTTATTTAAAATTTATATGGAAAAGTATACAAATCACAGTTATGCAATTCAGTGAATTATCACAAAGTTAATAACACTAGCCATAACCCAACCCAAAAAATATATCAGTGTGATTTTTAATTACTGTATAAACTGCTTCAGATCATTGGAAAAGATTAAAAGATGCTCAGTTGATTTTTAAAGTGCAGTGTAGTATTAATACTCAAACCCGATAAACTGCCAAAAAAGAATGCCATAGTGTAATCTCATCTATGACTATAGGTGTAAAAATTCCAAATAAAATTAAGTTGAACTTTATAACATGATTACATAAGGTTTATTTTAACATTATTAACATTATTACATAAGGTAATACAAGCTTCTATATCAGGAAATATTACTAATATATTAATCTCAAGAACATGAATATTATTTAAATGTCTGTAGATTAACATTTTCTTATTTTGATAATATTTCTTATGAAGATATCCTTGTTTTTAGAAAATACACATTGAAATATTTAAAGATAAAGACAATTGGCAAATGTTTCAAGAAACTAAATTATATACATACACATATGTATGTATACAAGTGTGTGTGCTAAGTCGTTCAGTCGTGTTCAGCTCTTTGTGACCCCCTGCCAGGCTCTTCCATCCATGGAATTTTCCAGGCAAGAATACTAGAATGGGTTGCCACTCCCTTCACCAGGGGATCTTCCTGACCCAAGGATCAAACCCGAGTGTCCTGCATGGGCAGCCAGATTCTTTACCACAGAGCCACCTACACTCATAAAAAAAAATACAGAGCAATTAAACACAAGTATTCTCACTGAGGAAATCAGTGAAGGGTATACAGGAATTCTTTGTATTGTTTCTGCAGCTTTTCTATAAGTCTAAAATTATTTCAGAATGAAATTTTTTAAATGAGAAACATTTAATCAGTATGTACTGAAAAAGCATTTGACAGAATTTTACAGCTTTAAGTGTGATTTGATAAACCTCCAAGTAAAAGGAAAAGAAACTGTTCATCAAAAACCAATAGTAAATATTAAAGTCTGAAATAACAGTCAACATTGATTTGAAAATTCAGTTGAAAATAATTAGGCAATAAAAGTGAATAATTGGTATATGTATTGGAAAATAATAAATTGTTTTGCTGATATGTGACTGTGTGTTTAGGAAATCTAAGAGGCTCTAAGTAAAACCTATTAGCATTAATGTGGAAATTTGGTAAGTGTCTGAATAAAAGATAAATGTACAAAAATCAATAGCTTTTTTCTATTCCAGCAATAATCAACTAGAAACAACAACAAAAGTATTCCATTAACAGTTGAAATAAATAGGTATATGTATTTGCTCACATATACATAAAGTAACTCTGGAAGAGAGAATAATTGGGTAGAGAGGAAACAGCAATGGAAGGGTAAATTAAC EMBV3_20755 CTCGAGATGCTCGCCACAAAACTCTCAATACATGTGGCTCCCATGCCTGTGTCATCATAC Gene GeneID:100299247|LOC100299247:XM_002693444:97_cdna Constitutive 0 NULL GeneID:100299247 15 GENE LOC100299247 NULL similar to olfactory receptor 690 EMBV3_00641 TAGAAAGCTTCCAAAGGAGGGGATTCTCTGGGCAGCCAGTCAGTGTGTTCCTGGACAGTT Gene BVV0102_312833 + 1 EMBV3_11559 GK000008.2:39460959-39497222 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227379 TCONS_00227386 TCONS_00227380 TCONS_00227385 TCONS_00227384 TCONS_00227381 TCONS_00227382 TCONS_00227383 1 XLOC_138232 Coding TCONS_00227386 XLOC_138232 Coding Coding CD274 8:39496047-39602995 j TSS169766 2736 1 TCONS_00227386_1 312 0.135964912280702 7 0.974482687686424 0.000242598917237402 3.53605262662907e-05 0.000148445358122976 0.000193893050911051 0.000181009326980668 4.88181200576187e-05 0.000106538652814821 0.000277223867795298 0.000466278555134067 5.01793218011738e-13 4.32722082212181e-19 1.62553199863665e-27 1.67914976574097e-05 1.83960726993018e-35 1.32195303960282e-27 0 0 0 0.000312697989520682 0.000103817335868316 3.15786806997862e-10 0 1.00771007098612e-15 6.79810678310813e-13 5.94414602853931e-05 0.000312314475232879 7.12463674365263e-05 1.79319716619201e-19 2.09569850298984e-19 8.80936094500597e-23 XM_005209964.1 CD274 PREDICTED: Bos taurus CD274 molecule (CD274), transcript variant 0.0 3402 100.00 0.688961988304094 NM_014143.3 CD274 Homo sapiens CD274 molecule (CD274), transcript variant 1, mRNA. 0.0 1377 76.93 0.654239766081871 TCONS_00227386_1 sp|Q9NZQ7|PD1L1_HUMAN PD1L1_HUMAN Programmed cell death 1 ligand 1; 5e-151 430 73.20 0.923076923076923 6 coding 0 0 0 0 -0.0521881166064078 0.634882997795225 0.0285448069220696 0.636083169619692 AGTCAAGACGAGGGCAGCTGTGGAGGCGCTACCTAAGCTTCCCGAATTTCCCAGGGCCCTCAGGCTGCCCCAGGTGGCAAGCTGTTAGTTCTGAAAATGGTTCGTTTTTCTCTCTACCCTCACTAGGAAGATTTATCAAATGAAATATGGGGCCGTGACTAACGGATAAAGCCTCCCTCTAGTGAAATGGATTTCCCGCCTCTTTTGCCTGCTTGCTAATGGGACGTCGCCTCCTTCAAGAAACCTTTCCTTTTCTTCATGGTATTTATCTCGGTCATTCCAGAAAGATGAGGATATATAGTGTCTTAACATTCATGGCTTACTGTTGTTTGCTGAAAGCATTTACTATCACAGTTTCCAAGGACCTGTATGTGGTAGAATATGGCAGCAATGTGACGTTGGAATGCAGATTTCCAGTAGACAAACAATTAAACCTGCTTGTGTTAGTTGTTTACTGGGAAATGGAGGATAAGAAAATTATTCAGTTTGTGAATGGGAAGGAAGACCCAAACGTTCAGCACAGTAGCTACCATGGGAGGGCCCAACTGTTGAAGGACCAGCTCTTCTTGGGAAAGGCTGCACTTCAGATAACAGATGTGAAATTGCAGGATGCGGGGGTTTACTGTTGCTTGATCAGCTATGGCGGTGCCGACTACAAGCGGATTACTTTGAAAGTCAACGCTCCATACCGCAAAATCTACCATACAATTTCTGTGGATCCAGTCACCTCTGAACATGAACTAACGTGTCAGGCTGAGGGTTACCCTGAAGCTGATGTCATCTGGACAAGTAGCGATCACCAAGTCCTGAGTGGCAAAACCAGCATCACCAGTTCAAAGAGGGAGGAAAAGCTTTTCAATGTGACCAGCACACTGAGAATCAACACAACAGCTGACAAAATTTTCTACTGCACTTTTCGGAGATTAGGTCATGAGGAAAACAACACAGCTGAGTTGGTCATCCCAGAACCATATCTAGATCCAGCAAAAAAGAGGAATCACTTGGTGACTCTGGGAGCTCTCTTCTTATGCCTGAGTGTAACCCTGGCAGTCATCTTCTGTCTGAAAAGAGATGTGAGAATGATGGATGTAGAAAAATGTGACACCCGAGATATGAATTCAAAGCAACAAAATGCTACACAGTTTGAGGAGACGTAATCCAGTGTTGAAACTTCTGCTCTTAAAACAGGGATTCTCAGCCTGTGGTTTGGGTTTATCAGACCAGAGGTATGCAGTGGGCCAGGGGGCTGCAGATGATGGAGAACTTAAAAAGCCCAAGCTCCGAAAACAGAAGCTCAGAAAGAAGAGGAGGACAAAGGAAGAAGGAATAAAGGTACCCTGGAAGGAAACATTGGTACTTCCGAATGGTGGAAGACTCATCAATACATGTGAAAAGGAGAAAGGACACTTCTAAATGATGAACTTCCATGCACATTATCCATCACTCATCTTAGAAAACAGGTTGAGATTCCCTGATTTAATGGTCAGTTCCTACAGAAGTGCCCTTTGCCTTTATTCAGTGTCTTGATTTGTCTTCTGGTTGATTGAACATCCTAGTGTTGCCAGGTGTGTGAGTATGATTTATTTTTATTTATTTTTAGTCTGTGGGGTCTTGTCATATAAGTGTGGTTGTGAGTAATTTCTTCTAAAGATATGCTGTAGTAGAAAGTAACACTTTAATGTCACCAGACCAAATTTACTGCTCGATGACTTGTATGTGTCGAGTGAAATGTAGTATTTTTAAAGTATTTGATATCCTCTATAACTGTCAGTACTTACGAATCATAGAGAACAAACCATTAGTTTGTATAAGATATTTTTAATGCCTTATTTAACCCACTGATACTTCAATTGACTCAGATAATCTTATTCTCAGACCTCAAAATAAGATATGTTACCAAAATATCTCTTATATTTAAATAGCAGCTTTACAACTATGTGTGCACATAATCTCATTTCATCCCTGTGTTGTGGTAAGCACTATTATTCTACCTGTTTCACAGCTGAGGGAGCAGAGGTACAGAAACATGACCAAGGCAATATATAGCAGACTTCAGATTTCCAAAGGTGTCACCCTTCATCCTTTTATTTATTTATTTATTTAAATTGAGGTCTGGTTGATTTACAGCGTCGTGCCAATCTCTGCTCTTAAGCAAAATAACTCAGTTTTATATATATATATATATATATATATATATATGTTCTTTTTTAATTATTAAAGAATTAATAAAAGCACTTTGTTACCTTCTGTCCTTTTAGAATATAATTTACAGCTATGCTTTACTTTAAGACATGTTCATTCAGCAAACATTTAGGAAGTGCCCTAGCATGTCAATCACTGTGCCAGGCAGAGTCTACAGATGTGAGCAAGATAAGGAAACTTCCCTCTAGGACCTCATAATATAATAAGGACATCAATAAGAAAATGTATTGCTATAATATGCTATAATGCACTTATGGCACTAGGTATAAGAGGAGAAAAATGTTGTGAGGAGGAAAGTTTAGAAAGCTTCCAAAGGAGGGGATTCTCTGGGTAGCCAGTCAGTGTGTTCCTGGACAGTTGAAAAGCGTAAATATTTTAAAAATCAAAGCGATTTCAGTTTATGAGATATCAGTATTCTTTAAAACCATGGAAAATGGCTCCTGAAATCCTTTTCTTTTTTTTTCTAATTTTATTTTATTTTTAAACTTTACATAATTGTATTAGTTTTGCCAAATATCAAAATGAATCCGCCAC EMBV3_39968 GTCGCTATAACCAGAGCCAAACATAAGCTGATTCTCCTGGGATGTGTGCCCTCACTAAGC Gene GeneID:540969|DNA2:XM_002698902:75_cdna Constitutive 0 NULL GeneID:540969 28 GENE DNA2 NULL DNA replication helicase 2 homolog (yeast) EMBV3_29722 TCAACACATCAAAACTTCAAAAATTGGGGGGATCTGGATCAAGTAGAAGCACATTTGGCT Gene GeneID:540945|DEK:NM_001099717:131_cdna Constitutive 0 NULL GeneID:540945 23 GENE DEK NULL DEK oncogene EMBV3_15607 TTTCTCACTCATGCACATCTTAAGAGTTGATGGGAAATGATGCAGTCTGCACATCCATCA Gene GeneID:281231|HRH1:NM_174083:71_cdna Constitutive 1 NULL GeneID:281231 22 GENE HRH1 NULL histamine receptor H1 EMBV3_07664 ATTGACCAAACACTGTCCCCACGTGTCCCCCATATTCGCACCTCAACCCTTCCTCTGTTT Gene BVV0102_225156 + 0 NULL GK000005.2:56767204-56773334 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01363 AAAGCTTGGCATTGCCCTGTGGCACACGTGGGCTTTCCAGACACAAGCTGCTTTCGTGAG Gene BVT0102_020844 + 0 NULL GK000013.2:66012155-66018135 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043620 TCONS_00043626 TCONS_00043624 TCONS_00043621 TCONS_00043622 TCONS_00043625 TCONS_00043623 1 XLOC_025977 Coding TCONS_00043626 XLOC_025977 NonCoding Coding EPB41L1 13:66004293-66015037 j TSS32219 3790 3 TCONS_00043626_2 104 0.0751978891820581 4 0.647584473610723 2.78070478145137e-05 2.50605721906414e-134 3.35914807336078e-08 0.000143508614850267 8.36261753905206e-06 1.88009242776776e-05 5.73293643143954e-05 4.50767155264968e-05 9.87573054784751e-05 6.55448515475477e-05 0.000829154644602275 6.29200437593991e-05 1.03144432216501e-05 1.63764570240382e-05 2.833894299382e-05 1.26802729220732e-35 0.00116010399069628 0.00038288161589674 2.43235678023848e-13 2.03767239462189e-06 2.31230090604348e-05 0 6.28546783681333e-05 1.30338865898937e-09 2.16523407591592e-32 5.72537056424716e-36 2.22798565075941e-05 4.73263323529996e-06 1.71439404793048e-47 0.00018161840476586 XM_005215010.1 EPB41L1 PREDICTED: Bos taurus erythrocyte membrane protein band 4.1-like 1 (EPB41L1), transcript variant X2, mRNA. 0.0 6414 100.00 0.937994722955145 XM_005260318.1 EPB41L1 PREDICTED: Homo sapiens erythrocyte membrane protein band 4.1-like 1 (EPB41L1), transcript variant X1, mRNA. 0.0 2717 76.28 0.936939313984169 0 noncoding 0 0 0 1 -0.079123351439303 0.58105083243799 -0.0563431672028142 0.330137036994511 TGCCTGAGTGGCCAGGAGGAAGAACAGGAGGGAGCCCAAGGCAGAGATGCGGTCCTGAAGGAGAGAGGCCAGGGAGCCAGGCTGAGTGGGAGGTTCCGTTCAAGCATCGAAGGAGGAATCTGACTGTGAAAGGAGGGTTTTCTGAGACGAGAATTGAGAAGCGGATCATCATCACCGGGGACGAAGATGTCGATCAAGACCAGGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCAGCATCCCGACATGCTGGTAACCAAAGCCGTCGTCTACAGAGAAACAGACCCATCCCCTGAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCTCTGTGAAAAGATGCTGGCGTTTCTGGTCCAACCCAAGCCAGAGAACCATAAAGAAGGGGCCTTCATCCTGGATTCTCCAACTCAACACCGACGTCCCAGCTGTGACGTACTGTCCCTGAAAGAGACTGGGAAAGGAAAAGCATATATATATAGATATATATAGATATAGATATATATACACAGGAAACACCACGTCCTCGCACTGCTGCCGGGGCTGGCCGAGCATTCGGCCGACAGCAACAACCAACATCTGAACGCCTACATATCCTTTGCAGACAAATTGAAGAATTGGTGGGATTTTCTAGGAAACCAAACAAATAAAAATTATAACAACAGTAATCCCTTGCTCCCCTCCCCACCCCACTTTGAAGCCCTGCAGAACAACCAAGGCAAGCCAGACCACGCTGATTGTAGAAGTACAAGGCCTCCTGGGCCTACACGTTCCCTTCAGTGGACAAGCATCCCATTTCTTCTTTTCCTGCGTCCATTGCCCACTCCAATGCAAAGGAAAACACTTTTGCAGCCAGTTAGAGAAGCTGCAGCAGCAAGACACGCCCCCGTCAACCGTTTTCCAAGAAAGAAAAATCCCCCATTCGGAAAGGAGGAGGAGGAACACTGGATTCTTATTTTTTGGGTCTTGACACTGGGCTGCAAAATCCACCTGCCTTTCTTCCGCCTCCTTTCCCCCTCAACTCTCACACGTCTCGTCATTTTCTGTCTGGGTTCCCTCCTCCCTCTCCCCCACCCCACACCCCTCACCCTCTGTGTCCTGGTCCTGCCGAGGGCCACTGCAGATGACTCTCACTGGAAATGAGAAAAAGAAAAGCAAAAACGTGAAACCAAGCCACAGGAGGTGAAAGTAGACATTATATGTTTATGGGTTCTCATTATGAAGGTGCCGCTTGTAGGAGATTTGTATGGATGTGCTTTTAAGTTATGTATATTACATATAACAGGAAACAAATATTAAAATAAACAGTGCTGGTAAGTATGAAGCTGACATTTTAAAATGATAATTATCTGACTGTGATTGATGTATTCTCAAGGTTCCTAGATCTCACCGAACCAACCCAGCCAAGGAGACCCGGACTCGGGCTGTGGGTCGCTCACAGTAGGAGCTGACAGTTCAGTGTAGAAATACAGTGTGTGGTGTTTGTACTTGGTTGATTGGTGGGGAGGGGTGGGGTCCCCATATGGAGAGGCAGGGGTTTGGCAAGAAGGAAGCGACCCAGGTGTGGTTCAAGATGCCTTCTCCCCCAGGCAGCAGCAGCTGGGACCTGGACCGTGCTCAGGACCCTGCAGCACAGATCCCCTAGCTCAGTCCCCCTACCTCCCCGGAAGGCTCGCCTCAGTTCTCAGTCATCTCTTTGTTGTGCCACATGTCTTGCCTTTCCCTGACCACAGTGTGACAGCTAAGTCCTATCCCAAGGGAGGTGATGCCCCCAGCTGCCGCGGAAGACGGTGGCTTCCACCTGGCTGTCTGAATGTCCCCAGCTCAGTTCTTTCTTTTGACCACTCCTGTATTCTGTCTGAATCATTCTCTTCTTCCTGGGTCAAAGCAGCGATGGTAGAGACTGTACATGGGCAGGCCCTGACAGGTCAAAACTGGACTCCCAGAGGCTCCTGAAACAAGCTGAGGTGGACAGGAGGTGTTGCTGGGGCTCCACCTTCGAATAAGACCCTGGCTTTGGAGACCTCCCCTTCAGTCAACATCTGTTCTCTGATCCTGGGCCCTAAGAGTCGGACCACAGGAGCCCTTGGAGAAGGTCCCATCAAAAGCTTGGCATTGCCCTGTGGCACACGTGGGCTTTCCAGACACAAGCTGCTTTCGTGAGCTCAATGAGGCCCCTTCTGAAGGCATTTGCCCTTTAATTTCTCAGTCCCATTTCATTTCCCCCATCTTGCTTCTAAAGCAGTTGATAAATTCATTCAACAAATATTTACTGAGTACTTACTTGTGCCAGGCACTATTGTTAGGCTCAAGGAGAAAGCATGGCGGTGGGGGCGCGGGGAGCAGAGGGACCTGGGAAGCTCCTTGAGCCAGCCTTACATCTCCAGCCCCTCTGAGAGCACTTCCGCCTTCTCTCCAATTATCAGACATCTGCGGATGCCCTGCCAAGGGCCCAGGCTTGCTTATACGTTCCCTTGGTGACACATATGCTTCGCTGCTTAACTGGTGCTGACCTGAGGCAGAACGGTGTTTGCCTCTGTAGGTAAACGTGATGAGGAGAGGCAGAGAGAGCCCTGAATCTGGGGCTCAGGTGGCACAGCCAGCCACACCCCCTCCAGCTCCCCCTGAGAGTGGAAGTGCGCCAGGTTCTTCTTACACAGAAGCCACAGAACCTCCTCCCCGTCCTCCTCAGCTTGAGAGCCCCCACTCCCTCTGGGCCAAGAGCTGGAGTGGCTCTGCCCTCTCTGGGCCACCTGGAATCTGGCTCAGGCATCCTTGTCTTTGCAGGAACCAGGTGTCCTGAGCGCACTGGACATACCTCAGAGGGAGAATATTTGTTGTGGGTTCTGCACCTGCCTACAGACCCTATGTGTGTGGCTTCAGGACAGGGAAGAAGTGACCAGGCTTGGTTTGTGGGCCAGCCAGGGTTTATGGAGCTCTCCAGTCCACAGATGCTCTGACCTTCCACAGAGAGGCAGGCATCTGCCAGCAGGGAGGAGGGGAGCTGCAAAGCTGAAATCTAGGGCGCTGTTTCCTTCCCATCCTCCTCTTCATAGGGAATATAGATGTTTGTCATATCTGTCGTCAACCTACTTTTCCATTTTCCATTTCACGTCCTTTCTGTGCCACCTCTCCACCCAGGAGACCATGTAGCATAGTGGAAGAAGTCCTGGAGGGCAGTCAGGAGTTCTGGGTGGCCATCCTGGCTCAGCCTCTAACTCACCACATGCCACTGAGCTCATCTTATCCTCGCTTCGGGGCCTCAGTTTCCTCACTTGCAAAAGGAACAGGAAAAGCAGATGCCCTCCATGGCCTTTGTCCACTCTGCCAGCCTGTATAAGTCTTTGTTTGCCCCTATTTTGCTTTCTTGGGATCTTTTCAATCTGAGGGTACAGGAAGTGCCAAGACCTGTTTCAGTTTTTGAATCCTGTAAGCACATTCCAAGACTGGCCTGAAATTGCATGAGCAACATCACTCTAAATTTTTTTTTTTTTTTTTTCAAAAAGCACCTTCCTAACCAACTGCGATGCTGTCCTGGTCCTTTTTGCTCACACCCCTCTCTCCTCTCTCGTCCCCGCGCTCCCCCACCTCAGTGCTCCGTGCTGTATGCGTGTGCTCTCTGTTCTTGTATACTCAATAAAAGTGAAATAAATGTGTTTGATGCTGAACCACAAACTGCGTTGGCATCTCTCTCTGACCTTGGCTACCAGTACAAGTTGGCATTGTGGGACAGGCTAAAATTGGGGTGGTGAGATCCCAACTGGAACATTTTCATTCAACCTACAAC EMBV3_38662 GAACAGGGAAGAAAATCAAACAAAACCCCAAGGTATTTTTGCCCTCTCCGGAGCCAGCCC Gene GeneID:540757|TFAP4:NM_001101215:255_cdna Constitutive 0 NULL GeneID:540757 25 GENE TFAP4 NULL transcription factor AP-4 (activating enhancer binding protein 4) EMBV3_11598 GACGGTCACGGAGGATAAGATCAATGCCCTCATTAAAGCAGCCGGTGTAAATGTTGAGCC Gene GeneID:533285|RPLP1:NM_001025340:197_cdna Constitutive 0 NULL GeneID:533285 10 GENE RPLP1 NULL ribosomal protein, large, P1 EMBV3_28930 GCTGGGGACTTTGGCTTCTCCCCTAGCCCACAAATCTTTTGATTACTTTGACTCGTGAAA Gene BVT0102_115456 + 0 NULL GK000005.2:51510057-51991216 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191839 TCONS_00191840 TCONS_00191837 TCONS_00191835 TCONS_00191838 TCONS_00191841 TCONS_00191836 1 XLOC_117036 Coding TCONS_00191841 XLOC_117036 NonCoding Coding FAM19A2 5:51599747-51601549 j TSS143688 898 2 0.502498611882288 0.0231597618814411 0.0126864456481814 0.0252482006056876 0.0187558794507985 0.0166850705395419 0.00707855324666534 0.00660845273252785 0.00963175547879399 0.00825972713676159 0.00193647750485834 1.56103719142121e-05 2.71357365533317e-05 0.000973044368814525 0.00260377295510677 0.00558031480431405 0 6.00857263113902e-05 0 0.0129426056651124 0.0140886566839895 0.00777087753054879 0 0 1.86684918931721e-05 0.022862082524956 0.0150553825412578 0.0101329747011531 1.15279605953409e-05 0.000211320542609808 2.3819609324367e-09 XM_002684155.3 FAM19A2 PREDICTED: Bos taurus family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 (FAM19A2), transcript variant X1, 2e-14 84.2 100.00 0.0501113585746102 NM_178539.4 FAM19A2 Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 (FAM19A2), mRNA. 0.0 812 82.11 0.942093541202673 0 noncoding 0 0 0 0 -0.492979849925923 0.0426732513499095 0.00136447610315801 0.977985179738805 AGCTGAGACCTATCTGCTAAAAGCCGGAACACAAGCGCCTGCCTGCACTGGGCAACTCCAGCGTCTTGAGGGCGGAGGACAGCGAGCTCGGAGCCTCTTCTCCGTCCTATCCCGAACCTCCCCAGCCACTCGCACGTCGGAGACCCGGGACCTGCGAGCCAGGGAACTGGAGAAATACGCGGCGGAGGCTGCTTTCCTGAAGGTGAACCGTTCCGTCCAATTGCCTTTCCCCAGAGAGCAAACGGGAGGGCGGGAGAGAGTGAACTGAGGATGTGTGCGTGTGTATCTGTGTGAGACGACGTGCAGCGGGAGGAAGAAAAGTCGTTACTCGGCGTTTTAAAAGCAAACAAATCAGAGATGGATAAGAGCGGCGATTGCTGCGAGACCGCCTTGATTCTCGCAGTGTGAGGAGCTGAGCGCACCGCGCGCACCGGCGAGGACAGCGGGCGACCGCGGGCGCTGGCGAGGGCTGGGGACTTTGGCTTCTCCCCTAGCCCACAAATCTTTTGATTACTTTGACTCGTGAAAAACGAGAGGAGGAAAGACACGTCACCTTCCATCCACTTTAAGGGGATTCCAGTTTGGATGTCAAGAGATTCCTGAACCCTCTTTGCTATCGGAGGAGGAAACACACGCGCGCGCGCACACATACACACACGCACGCTCGGGGCCACACTCACACGCCCTCCACTAGCACACACCTCCAGACTTCGTTTCCCTATGCCCCAGAACGGTAACGGCGGATTGGCATCTTGGAAGCGATGCGAGAGCGATAAGGCTGGCGCGGGTCCGCGGAAGCTGCAGGAGCATCGCTAGGTGTTGCCGCCACCAGGAAGCCGGGCTGCAGAACTGCAGGCTGAGCCATCTAGTCTCCACATAAAGAGGACGAACTGTCGGT EMBV3_10707 TCAAGAGAAGGTGGACGGGACCAAGGCGATGCGTCTTCACTGCACAAGACTAAACCACAA Gene GeneID:281302|MCM3:NM_001013586:195_cdna Constitutive 0 NULL GeneID:281302 23 GENE MCM3 NULL minichromosome maintenance complex component 3 EMBV3_04394 GGGTCAAGTGATTCTAAAGGAGCCGAATTTCAAAGCAAGTATGCACTCCTGGGTCTGGTG Gene BVV0102_089598 + 0 NULL GK000002.2:37490229-37593289 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19623 CAGCAGGGCATGACGCCCTCTGCCAAGCAGCTGGTCCCGGAGCATGTGGTCATGACCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01110 GTGAAGTTATACATTTCACTACATAAAGGCTGAAAAGTTTGCCTTGTTTCAAATTGTGTG Gene GeneID:767842|C4orf32:NM_001076961:83_cdna Constitutive 1 NULL GeneID:767842 6 GENE C4orf32 MGC140679 C4orf32 homolog EMBV3_19745 CTTCTGTCATTTGCACATCCTTCTCTTCCTGTACTGTACATAGATATTTTTGAGATTTAT Gene GeneID:529745|SPATA2:XM_002692500:616_cdna Constitutive 1 NULL GeneID:529745 13 GENE SPATA2 NULL spermatogenesis associated 2 EMBV3_41500 CTGGGAGCACTTTGTAGGCATTGCATGAACCATGGAGTGATAATTCTGTGGAAGTACTGC Gene GeneID:540322|WEE1:NM_001101205:199_cdna Constitutive 0 NULL GeneID:540322 15 GENE WEE1 NULL WEE1 homolog (S. pombe) EMBV3_36529 CCCATTGACCTGGACGAGTGGTGGGCACAGCAGGCGCCAGCCACACCTGAAGTGCCAGCA Variant GeneID:618020|C25H16orf14:NM_001079511:288_cdna 531^692 1 EMBV3_08441 GeneID:618020 25 GENE C25H16orf14 C16orf14 chromosome 16 open reading frame 14 ortholog EMBV3_07104 TTGCCAGCCTCCTCACCCAAATCCTGCTTGACCTGACCATCAAGGACACCTTCGCCGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21408 AAAGCATCTGGGACACTTTAAGCAGTGGAAGGAGAAGTAAGCTGGAGAAGCCCACGGGGA Gene BVT0102_056782 + 0 NULL GK000002.2:96460030-96470386 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105961 TCONS_00105960 1 XLOC_062681 Coding TCONS_00105961 XLOC_062681 Coding Coding FZD5 2:96463370-96473324 o TSS78074 9430 1 TCONS_00105961_3 585 0.146023329798515 3 0.0528483874208782 0.000662788713103796 0.000490011368402901 0.000712116275763424 0.00021298471190318 0.000196548215990188 0.000164767833346589 1.61522408778863e-08 0.000275960285881641 0.000556421464887205 3.75986772138456e-05 8.80697443188331e-08 1.37133877911483e-07 1.09489774979664e-07 1.79356582651357e-07 1.83330982600292e-07 0.00386378799942635 0.0020712416253917 0.0040573327027344 2.72920277019095e-07 0.000301139824266505 0.000362245246641484 0.000156229135701295 3.46364280332617e-07 0.00154311578707845 0.000886865828497642 2.7189133917564e-07 0.000321645331229026 3.6739683177827e-07 1.85946837191188e-07 2.30072665047559e-07 XM_005197511.1 FZD5 PREDICTED: Bos taurus frizzled family receptor 5 (FZD5), transcript 0.0 1.224e+04 100.00 0.719618239660658 NM_003468.3 FZD5 Homo sapiens frizzled family receptor 5 (FZD5), mRNA. 0.0 6304 81.08 0.694379639448568 TCONS_00105961_3 sp|Q13467|FZD5_HUMAN FZD5_HUMAN Frizzled-5; 0.0 1136 96.75 0.998290598290598 2 coding 1 1 1 1 0.026258406314339 0.805285038758987 -0.0182291213719713 0.733600152828191 CCGGGCGGGGCGGGAGAGGCCAGTCCGCCCGCGACCGTGACTCTGCTGTGGCCACCGCCGCCGCGTGCAGTTCAATACCCGGCGGAGGTGCAGCCAGGCGCACTCGCCCCTCCGTCCGGCTCCCGGACCCTGGTGGAACGCACGGCCTGTCCCCGCCCTACTCCCGCCCGGATCATGCGGGGGGCCCGGGAGGAGGAGAGGGCGAGTGACCAGTCTGCGGCGACCTCGTTCAGGGGGCGACCCCCTCTCTGAGACGCCCCCACCTGCTGCCATGTGCTGCTTCCTCGGATACCCAGCCTCTCGCCAAACTTTCCTGATGCCAGTCCGTCTCTGAGAAACGTGGAGTGTCCCAGGGACGGGGGACCCAGGCTGGCTACGGACTCTCTGCTTCTCTCGGGATTCTCGGAGAGTTTTTTTCCCAGAATCGGAGCCTAATCGTCCCTCTCCAGCCCTGTCCAGCGAAGAGCTGAGCGCTCCTGCGGAGGCAGCGCCTTCCCGAAACAGTTGGTCTTTGGACGGATTTCTTGAAAAAGAAACCAACAGGTTGCCAGCCCAGGCGCCACGCAGGTCCGCGGAGAGGGAAGCTCCGATCCCGGTTTCCTCCTGCCTGAGCTGGCCCCGCGCGGGCTGCGGGAGACGCGGGGAGGGAGGGGGCTATGGCTCGGCCTGACCCGTCCGCGCCGCCTTCGCTGCTGCTGCTGCTCCTGGCGCAGCTGGCGGGCAGGGCGGCCGCCGCCTCCAAGGCCCCGGCGTGCCAGGAGATCACAGTGCCCATGTGCCGCGGCATCGGCTACAACCTGACGCACATGCCCAACCAGTTCAACCACGACACGCAGGACGAGGCGGGCCTGGAGGTGCACCAGTTTTGGCCGCTGGTGGAGATCCACTGCTCTCCGGACCTGCGTTTTTTCCTGTGCTCCATGTACACGCCCATCTGCCTGCCGGACTACCACAAGCCGCTGCCGCCCTGCCGCTCGGTGTGCGAGCGCGCCAAAGCCGGCTGCTCCCCGCTCATGCGCCAGTACGGCTTTGCCTGGCCGGAACGCATGAGTTGCGACCGCCTCCCGGTGCTGGGCCGCGACGCCGAGGTCCTGTGCATGGATTACAACCGCAGCGAGGCCACCACGGCTCCCCCCAGGCCCTTCCCGGTCAAGCCCACACTCTCGGGCCTGCCGGGGTCGCCGGCCTCGGGGAACGACTGCGCCGCCGGGGGCCCGTCGGTGTGCAAGTGCCGCGAGCCCTTCGTGCCCATTCTGAAGGAGTCACACCCGCTTTACAACAAGGTGCGGACGGGCCAGGTACCCAACTGCGCGGTGCCCTGCTACCAGCCGTCCTTCAGCCCCGACGAGCGCACGTTCGCCACCTTCTGGATCGGCCTGTGGTCTGTGCTGTGCTTCATCTCCACCTCCACCACGGTGGCCACCTTCCTCATAGACATGGAACGCTTCCGCTACCCGGAGCGCCCCATCATTTTCCTGTCAGCCTGCTACCTTTGCGTGTCGCTGGGCTTCCTGGTGCGCCTGGTCGTGGGCCATGCTAGCGTCGCCTGCAGCCGCGAGCACAGCCACATCCACTACGAGACAACGGGCCCTGCGCTATGCACTGTCGTCTTCCTGCTGGTCTACTTCTTTGGCATGGCCAGCTCCATCTGGTGGGTCATCCTATCGCTCACCTGGTTCTTGGCGGCCGGCATGAAGTGGGGCAACGAGGCCATCGCGGGCTACGCGCAGTACTTCCACCTGGCCGCGTGGCTCATCCCCAGCGTCAAGTCCATCACCGCGCTGGCCCTGAGCTCCGTGGACGGGGACCCGGTGGCCGGCATCTGCTACGTGGGGAACCAGAACCTGAACTCGCTGCGCGGCTTCGTGCTGGGCCCGCTGGTGCTGTACCTGCTGGTGGGCACGCTCTTCCTCCTGGCGGGCTTCGTGTCACTCTTCCGCATCCGCAGCGTCATCAAGCAGGGCGGCACCAAGACGGACAAGCTGGAGAAGCTCATGATCCGCATCGGCATCTTCACGCTGCTCTACACGGTGCCCGCCAGCATCGTGGTGGCCTGCTACCTGTACGAACAGCACTATCGCGAGAGCTGGGAGGCCGCGCTCACGTGCGCGTGCCCGGGCCCGGACTCCGGCCAGCCGCGCGCCAAGCCCGAGTACTGGGTGCTCATGCTTAAGTATTTCATGTGCCTCGTGGTGGGCATCACGTCAGGCGTCTGGATTTGGTCCGGCAAGACTGTGGAGTCATGGCGACGCTTCACCAGCCGCTGCTGCTGCCGTCCGCGGCGGGGCCACAAGAGCGGCGGCGCCACGGCCGCGGGGGACTACGCCGAGGCAAGCGCCGCGCTCACGGGCAGGACCGGGCCCCCCGGCCCCGCCGCCGCCTACCACAAGCAGGTGTCACTGTCGCACGTGTAGGAGGAGGAGGAGGCCAAGGGACCGGGAGCCGGGCGGGAGTTGAGGGAGCTAGGTTGTTTTTGTTTGGTAGCTTTGCCAAGGTCACTTCCGTTTACCTTCATGGTGCTGACGCCCCCTCCTGGGGCAACTTGGAGAGAGGAGGGAAGAGGCTGTTTCCAGGGGGGCACCTGTCCCAGGACTTCTCAGAGGGGCTCAGCTGATGTCTGCTCTATCTTCCTGCCTTTTCGAGGGAAACCCTGTTTTTAATTTATATGTCGTTTTCTTAATTTTTAACTTTGTTGCATTTTGGCAACAAAATTTACCTTTGCTTTGTGGGGGCTTTACAATCCTAAGGTTGGCATTATAATGAAGTTCCGCTTGGTTCAGGTTTCTCTGAACTGTGTGGTCTCAATTGGGAAAATGTATTTCCTATACTTGTGTCTTTAAAAATAATGTGAACAGTGAAAGTTCAGGTTGCTGTGACCGGGAAGTTGTCCCGTGGGCTTCTCCAGCTTACTTCTCCTTCCACTGCTTAAAGTGTCCCAGATGCTTTACGGTGAGCTGCTTGACCCTTTCCCTAACTTAGGGGGGGACACCCTAAGTCACACTGAGGAGAGGAAGCATAATGGGTCTGGGGCCTCCGGAAAGTGACAAGGTTAGGAAGTGTTCAGAGTTTGTGTGTGTGTCCTAGCTTTGTTTAGCAAGCTTGGGTTTCTTTTCTGTAGTACTTGTAATCATTCTCATTCTTAACAGTGCCAGCTTTGCTTGAATGACTTAGAGGTAGCATTGTAAGTGTCCAGAATAAATGTTTGGAATAGTGCTAACCTAAGGGATGGTGATTGGTTGAACTTCAATACTAGACTGTTAAGATGGCAGCTTTGTGCTGGAGGAGTGGGTGGTTGTTAATAGACTCCAGTGATCTTACTTTAAAAAAAAAACAACTTGTGTTATATTTTGGTAAAAATGAACCCACTTCCTTCTTCTGAGAGTACTTACTGATAGAGCTGAAGGGGGCTCCTTTTTACATTTAAGGACTAAACTGGATATACCTCCTGTAATTAAGTAAATTTCCAGCACTTCTCTTATCTGCTCCACCCCCATCCCACCTCCTTTATCATGTTAAACAGTCCTTTGGCTTTTCTTATTCCTCCTCTCCTGGAGAGCTGTGATTAGAAACCACACCCATCCTTGAATGAGGTGCTTGAAAGGGGGGTGGGGTAGGAGGGAGGCTGGCTACCTGTGAACAAACATTGGCAGCAATGAGGGAAAATGAGTGTCCCTGGACTTTGGACTAGATTACAGCCAGATATTTCAAAAGCAGCGAGACACTGCTCTCTGCAGCCTCTGACAACAACTGAGACCATAACACACTTGCTTAAGCTTTAGAAACGTGGATCGGTGTAGCAAAAGGAAAGCTGTTTTCCCCACCCCACCTCAATATATGTTTCTTTTCCTCCTCTTCTGAGAAAGCCTATATATTGGTGAGCACACCCTCACACACTTTACTGTTAGAGAATTCTGTTTGCTTTTCTAATCTGTTGAACCATTCCCTCATTCATATATGAAAGCCTGCGTATTGTTGAATACACACGTACACACACTACACACACACACACTTTACTGTTAAAAATGCTGTTTGCTCTCCTAATCTGTTTAACCATTCATTCATTCAAGAAGAGTGTGAGGCTATAGCTGGGGAAGGGAGTGAAAGTGCATTTTACAGTAAAATACTCGGGACTAAATTTAAGAAGCTAAAATGGCAAATGTAATTAAAATTTGGGAGTAAAGATTTGCTCTTCATTTATACCAAAGTTGGAAAAGTAAGATTTAAGCCCAGGTCAGGTTTTACTTTATGGATATTAAGTAAAGACGTATATATTTTCCACAGTGGATTTAAGTGCTATGCTGGTGGAAAGAAGCATGATGTTAACAGTTTTCATGAACTTTCAAAGGCTCTTCATGTTTATAAAAATGCACTGCTCTTACACACTCATCTAAATCAAAATTAAATTTCAGTATATTTGACAAAACCTGGTACACCTAGCTACAGAACTTTTTGCACATGTAATTCCTCTACTTATTCTGCAGCTTCTTAGAACCTTGAAATAGATCCCCTGCCTGAGGGCCAGGTCCTCTCCTGTTTTTCAAATGAGGACCTTTTCTGATCATCTTGACCTCTTCCCAGAAAGTACATAGATTATTCTGCTGCCTTCAGTCATTGTGTCTAATTTGGGTTGTTCCTCTTTCTCTTTTTTTTGTGTGTGGAAGAATGTAAAGATGATGCAGAATTTATCTAAAAGTTGTGAGAGGATGTGGTTGAAGTGATTTAATTCTTACTTTTAAAACAATTATTTTTTTTTATTTTGGCAACATACCAAACCTAAAAAGAACAACCAATTTACTTTAAAAAAGAATGTAAGACGGTTAAGAGAAAGGATACTAAGGCAAAGAGCAAGAATAGAGGTAATGCACTGGAGGTTTTTTAGGTTCATCCCAGTTCTTGGCGTTGCCTGTTTTCAAGTCTCTCTCTCTAACCCCTGCTCTTCCTTCTCTCAAAGATTAAGCCCACCTGCTTCCTGAAGTCTTGCATCAACCACCCCTCCCCCTACCCAGGCAGAGAAATCCATGTATTTATGCTCACCCTGTTTCCATCCCGTACTCGATTTTCTCCTGATTTTTATTTTCATTAGGCAGACAATCCATACTCATGAAAACAATTATAAAATGAAAGGTTGTGAGGTAGTTTAGCAACTTCTTCAGAGCTAGCTCTGATTTTAATGAGGATTTAAGGCCCAGTTTAGTCTCATTCATATACCGCTTTTGGGCTGTCCCTTTCACGGTTCAATTTTAAGGAATGTCTCTCATCATAGATAGGAGGGTAAAGGTTTAGAAGGAACTAATATGTGACCTATCAGTGAATCAGTTGACAAAGAGACTTAGGAAGTCTTTTTAATATGTATTATTAACCTCACATTTTGAAGCTGTCTAAATTGACTGGAAGAAAGTTCTCTTGGTGCCTTATCGGTTTATCCTTGCAAACCTTGGTCATATTTTCTTGCGGTCATTTCCAACGACGGGCCCGTGTGTGTATTGTGTGTCACGTGCGCATGTACAGGCTTAAATAATGTGCCAACAGCACTGTTTCCAAGTTGGTATTCATTAGGCCCTTTCCTCCTGGGTTAGGGCTGCACTAATCCTGACACCGGCTGCCAGGAGGAAACCTCATGGATCCCACACCGAACCTTAATAACAGCATCCGTGACCTGCAGTCTCAAGTACAGAATGGGAACCCCAGAGCTAGGAAATGTAGTTGTATATTTTAATGAACTGCCACCCCTGCTAAAGAGGCTTCTTTCACTTTTGTGCTCTACAGAAAGACCAAGGGGGGTAGGAGGGACAAAGCTTTGAATCACTGCTTTCTAACACCGAATGGGGCCAACAGGACAGAGAACATCACAAATCGAGGCAGGTGTGAGGTGCAGTGGCTGAGAATTGCCTGCTCCCTCTGCGTGCCCTTTCTTGCCTCCAAAGTCCAATCAAGTGATCCTGGGAAAGAAATCTGCCTGGGTTGAGGAGGGTGGTTCTGAAAGAAAAAGCTACCAACACATGAAAGCAGGGTGAAGGGTAGGCAGGATGAAAGTAACTAAGTAACCTGACTCAGAACTCTCAAAAGCTTCTAGCAGCTTGATGACAATTACAGGATTTATTTCAGCCAGGATAATGTCTGTGGTACATTATTTGAAGACAATATTACTTCATGTTGTTACAAACTGTATGTATAGTGTGTATGTGTTGTGGGTGTATATAAATAATATATATTATATATATGGGAGATTTAGTGACTTTTGATACGGGTTTGGTGCAGGTGAATTTATTACTGAGCCAAATGAGGCACATACCGAGTCAGCAGTTCGAGCGCAGGGCATTCATTACTTTTTCTGATTTCCACACATGTGTACTGCCTGTCCCATGAGGTATCGTCGATGTCATGTCAAATCCAGAACTCATAAAGCAACGCCAGTGGTATTTTATTTGTAGACAATCAACTCAAATCTATAAATTATTACTGGCAGATGATTATAATTCTGAATCTCTTAACACTAACAAAAGGAAACCCAGAGCATCTTGATACGAAGTTTTTTGTTTTTGTTTTGTTCCTGGAAGTCAGAAGAACAGCAGTTGTATGTGGTTGTTAGTTTCAAGGTACTTAATTTGCTGACACTATTTCAGAAAAAAAATCTGTATGTATTATATTTGTGGGAAGCTAAAATAATGGTTTGAGATTTTTATCAAATATGGAGAGTAGTTATTTATGAAAAACAAAGAAATGTCTATTTTTGTTTCTTTGTTCCCAATTAATGTAGATAAATTTTAAAGTGCATTAAAGCAATGGTAAAGTAAATAAAAAGATGCTGTACAAGTATTTTTCTCCTCATGCTTTTACAAAGAGACACACTGCTTTCTAAGTGATTCCCTGGAGTAGGAAATGGCAAACCATTCCAGTATTCTTGCCTGAAAAATTCCAAGGACAGAGGAGCCTGGTGGGCTACAGTCCAGGGCATCTCAGAGTTGGACATGAATGAGCATATGCTGGCTGAAGGTGCTATGTGGATTCTATCATATTTCTCAGATATGAGTGGCAACCTTTTTATTGATAATAAAATCAAACAAATTCCAATCACAGAAGCAGAACTAATGAAAACATGTTTTACTTGAATATACTTCTTAGGTTTCTCCTGCCAATCCTGTGATTGTTTTATGATTCACTTGAAGAAATGAAAGGAAATACACAAGAACAGAGACACTGCCTGACATTGTGTTCTGTTTTGTCAGCTCTGTCTAGACTCTGCTGAAGCAATTTGGATGGAAGTGGTGCTGTTCTGTGTGCCTGCTTGGCAGTCGTAAGCTCCCCAAACTTTATCATTAGATTTACAACTTGGTATTCAGGCTTCCCAGGTGGCTCAGGGGGTAAAGTATCTGCCTGCAATGCTGGAGACCTGGGTTCAATCCCTGGGTCTGGAAGATCCCCTGGAGAAGGAAATGGCAACCTACTCCAGTATTCTTGCCTGGAGAATTCCATGGACAGAGGAGCCTCTCGGGCTATAGTCCATGGGGTCACAAAGAGTTGGACATGACTGAGCAACTAACACTTTCATTAAGGTCTAAACACCAGTCAGGGAGCTCAGATAAACAGATATATATTCTCCCTCTGTATTTGTGGAGAATTGGTTCCAGGAACTTTCCCTCCCTCAAATACCAAAATCCACAGATGCTTAAGTCCTTTATATAAAATGGTACAATATTTCCATATAACCTACACACAGCCCTTCCATCTTCCCCCTGCCTCCTCCCGTATACTTTAAATCATGTCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGATTCTGTGTGACCCCAAAGATGGCAGCCCACCAGGCTCCCCCGTCTCTGGGATTCTCCAGGCAAGAACACGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCCGACTCTTCGTGACCCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCATGGGATTTTCCAGACAAGAGTACTGGAGTGGGGTGCCATTGGCTTCTCCGAAATCTAGATTACTTCTAATACCTAATACAAATCCTCAGTAAGTAGCTGTTTTAAGTATAATGCAAATGGTTGGTGGTATGCAGCAAATTAAAGTTTTGTTCTTCGGAACTTTCTGATATTTTTTCCCCAAGTATTTCCAACCTGTGGTTGATTGAATCCACTGATCAGAACCTGTGGATACAGAGGACCTATTGTAAGTTGATTTAAAGTTGCCACTTCCCTGACAATATGGACAGATGCTTAGCAAACCTGAGAGAATGTAGTGTCAAAGTGAGTATGATGAGCATTGTTAGATTGGTACACATTAGGGCATTTGAGAGAATAGAAAATACAGCAGTTGAGCTGGATCCTGGTAGAAAAGCCACTGTGCCTTCCCCATACAGGTCTCCATAGTTGACACATCTTCCCAGTGCTTTCTCGTTGCTTATTCCCCAGCAGTAGAAAAGGGGCCTGTTAGGTGGCTAGAGAAATAGGTCATAATGCTTTAGTGGTTTAGTTTCAGAGCTCTTTAATTGGTCATGTTCAACAGAATGAGAGGCAGTAGAATTGTTCTATGCATAGATTTGGGAGCTAGACTGCCAAGGGACTCAAATTCCAGCTCCATCCATCATGGGCTGCTTGATCCTAGACAGATTACTTAACCTTTTAGTACTCTCATCTTAGTACTTTCTCATCTGTGAAAGGGGGATAATGATAGTATTTATATTTTAGAGTTGAGAGGATCTGAATGATTAAACCAGGTTAAGGTAAGTATCAATAAAAGGAGGAAGCAGCCATTCAGGCATGGAATGGAAGAGAAAAAGACTAGTTTTCGTTTGGGTCTGTGTGAGAATCATTGGGGGTTCCTATTAGAAATGTAGATTTCCTGGCTTTGCTCCAGAAATTGAGATTTGTTTAGTCTAGGGTCCAGGAAGTGGGTCTTTTTGTTTTGTTTGCTTTTTAGTAGAATTATTTTAGGTTTACAGAGAAGTTGCAAAAATATATACATCTTGCCCTAATATTAACATATTATCATAGCACTTTTGTTAAACTGAAGTCAAGATTATCATATTAACTAGACTTCATTTGGATCTCACCAGATTTTCCAGTTTCTTTATCTGTTCCAGGATTCTACTCATTTCTTACAGGCTTTCAGCCCATGAGGCAGATGGTCTGGGGACCACATCTTGTGAAATACTAGGACACGTAAAGGACCAAGCAAGGTCAAATTGCCCTATCCTCATGTTGGGAAGATGAATGCAATTTTGAAGCGGAATAAATTGGTGAGGGGAGGGGATGGGGTTGGATATAGAAGTTTGATTTTAAGAGTTGGGATGGAATTGCCTCCGTTGGATGAGAGGGGTTACTTTAAGAGTGAGGCATCTGTTCCTAACGCAAGTTAAAAAAAGTGGGG TCONS_00105962 s 5' 0 TCONS_00105962 s 5' 0 EMBV3_06988 ACCTGGACACTGATTATGGCTCGGGCTACCCTAATGATCCCAAGACGAAAGCCTGGTTGA Gene GeneID:512830|RNASEH2A:NM_001038534:35_cdna Constitutive 1 NULL GeneID:512830 7 GENE RNASEH2A MGC134067 ribonuclease H2, subunit A EMBV3_23759 TGCCTGTAAGGACATAATGCGCTTTATTCACATCAAATAGTAAACATAGATCTGATGCTG Variant GeneID:617788|UFSP2:NM_001076477:82_cdna 333^399 2 EMBV3_04836 GeneID:617788 27 GENE UFSP2 MGC142326 UFM1-specific peptidase 2 EMBV3_26587 GTGGCTCAGGTTCGTCGGCGTGCGACCAAGACTGGAAATAGCAAAGGCTACGGCTTTGTG Variant GeneID:509598|MKI67IP:NM_001034354:5_cdna 136^273 1 EMBV3_29470 GeneID:509598 2 GENE MKI67IP MGC127116 MKI67 (FHA domain) interacting nucleolar phosphoprotein EMBV3_42109 CTTAACCGGCGTGGTTTTTATGCTGATGTATTATGCCTTCTTTCACCCCAACGGACCCCG Gene GeneID:517598|XKR4:XM_002692650:67_cdna Constitutive 0 NULL GeneID:517598 14 GENE XKR4 NULL XK, Kell blood group complex subunit-related family, member 4 EMBV3_21858 CCCAGTGGCCTACAGACCTCAGCTTCTCCCTCTGAAGTTCCAGTCTCCAAAGATCAGAAT Gene GeneID:783820|ZNF646:XM_002698070:54_cdna Constitutive 0 NULL GeneID:783820 25 GENE ZNF646 NULL zinc finger protein 646 EMBV3_04986 CTTGCCTCGGTAGCAGCTGCAGTCTCCGGACCCAAAGCCAAAGCCGAATGAAAGAGGTGT Gene GeneID:359720|RTN2:NM_001113260:92_cdna Constitutive 0 NULL GeneID:359720 18 GENE RTN2 MGC143039 reticulon 2 EMBV3_36131 CAAGAGCAGGATCAGCACATCTTCTGCTGAAAAGACATCAACTCATCTCTGCTCAATAAC Variant GeneID:509974|GPR114:XM_002694793:619_cdna 343^640 3 EMBV3_41407 GeneID:509974 18 GENE GPR114 NULL G protein-coupled receptor 114 EMBV3_27762 CGAGCTACTTCCAGATTCCATAAGGTTGGCTTGTAAACCCTGGTCTCCCTCTCTTTTACC Gene BVV0102_158581 + 0 NULL GK000013.2:53619427-53668953 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045519 TCONS_00045520 1 XLOC_026453 Coding TCONS_00045520 XLOC_026453 Coding Coding SIRPA 13:53667561-53969072 j TSS33196 3736 1 TCONS_00045520_1 214 8 0.987635567642864 1.04886109342522e-05 6.33395330922962e-09 1.84193645957048e-07 3.15366539763419e-06 1.85193651199296e-08 1.67817822824152e-06 2.87290292010519e-05 4.76157510197371e-11 3.6520875912721e-09 5.44475289007168e-07 8.60730000442004e-07 7.9213458249813e-07 6.31496836059517e-08 0 6.15967523245346e-06 0.00062675429510695 0.000100601693817882 0.000176790702970773 2.38860634984608e-06 7.32644419352765e-06 4.27787448828662e-11 0.000184765484669845 7.66513855659637e-06 0.000430717447498798 1.13393716451223e-10 1.03009608205792e-11 8.87680564871343e-07 5.99744557167982e-05 8.52744739266012e-11 2.13655666074312e-06 XR_083446.3 LOC782991 PREDICTED: Bos taurus tyrosine-protein phosphatase non-receptor type substrate 1-like (LOC782991), misc_RNA. 0.0 6563 99.38 0.990631691648822 NM_001040022.1 SIRPA Homo sapiens signal-regulatory protein alpha (SIRPA), transcript 0.0 2736 76.31 0.987152034261242 TCONS_00045520_1 sp|O46631|SHPS1_BOVIN SHPS1_BOVIN Tyrosine-protein phosphatase non-receptor type substrate 1; 2e-139 404 97.66 0.995327102803738 1 coding 0 0 0 0 -0.0503106791908674 0.734180667133506 0.0244579608846074 0.594114769234038 CTGTGAGTGTAGAAGAGTTTCCAGCAGAGGTGTGAGTTGACAGGGGAGCTGCAGGTGATTCAGCCTGAGAGGTCAGTGTCAGTTGCAGCAGGAGAGACGGCCACTCTGCAGTGCACCGTGACCTCCCTGAGCCCCGTGGGGCCCATCAAGTGGTTCAGGGGAACTGGGCCAGGTCGGGAGTTAATCTACAGTCAAAAAGAAGCTCCTTTCCCCAGAGTAACAAGTGTTGCAGATGCCACAAAGAGAAACAACACGGACTTTTCCATCCGCATCAGTAACATCACCCCAGCAGACACTGGTGTCTACTACTGTGTGAAGTTCCGGAAAGGAGAACGTGGCGACGTGGAGTTTAAGTCTGGACCAGGCACTCATCTCACTGTGAGCGCCAAGCCCTCTCCTCCCGTGGTATCCGGCCCTACAGTGAGGGCTACACCTGAGCAGACAGTGAACTTCACCTGCACATCCCACGGCTTCTCCCCCAGAAACATCTCCCTGAAATGGTTCAAAAATGGCAATGAGCTCTCAGCCTCCCAGACCAGCGTGGACCTAGAGCACGACAACGTTTCCTACAGCATCAACAGCACAACCAAAGTGCTGCTGGCCACGGGAGACGTTCACTCCCAGGTCATCTGCGAGGTGGCCCACGTCACCCTGCAGGGGGGCCCTCCTCTCCGTGGGACTGCCAACTTGTCCGAGACCATCCGAGTTCCACCCACCCTGGAGATTACCGGCTACTCGTCAGCTGGGAACCAGGTGAACGTCAGCTGCCAGGTGAACAAGTTCTACCCCCGGCACCTACAGCTGACCTGGCTGGAGAACGGAAACATGTCCCGAACGGAAGCAACCTCAGTCCTCATAGAGAACAAGGACGGGACCTTTAACCAGACGAGCTGGCTCCTGGTGAACTCCTCTGCCCACAGGGAGGCTGTGGTGCTCACCTGCCAGGTGGAGCACGACGGGCAGCCGGCGGTCTCCAAAAACCATACCCTGGAGGTCTCTGCTCCCCAGAAGGACCAGGACACAGGTCAAACCCCTGGCCCGAATGACAACAACTGGACCAGCATCTTCATCGTGGTGGGCGTGGTGTGTGCCTTGCTGGTGGCCCTGCTGATCGCAGCCCTCTACCTCCTCCGAATCAGACAGAACAAAGCCAAGGGCTCCACTTCTTCTACAAGGCTGCACGAGCCCGAGAAGAACACCAGAGAAACAACTCAGATCCAAGACAACAATGACATCACATATGCAGACCTGAACCTGCCCAAGGGGAAGAAATCAACCCCCAAGGCCAATGAACCGAACAACCACACGGAGTATGCCAGCATTCAGGCCCGCCCGCCACCTGTGTCTGAGGACACCCTCACCTACGCTGACCTGGACATGGTCCACCTCAACCGGACCCCCAAGCAACCGGCCCCCAAGCCTGAGCCATCCTACTCAGAGTATGCCAGTGTCCAGGTCCAGAGGAAGTGAACAGGGCCGTGGTCATCTCTAGGGTCTGTCCCCATGAGCCTTCCTGTCCCACACGGAGCAGCCGTGGTGAGGACAACCAGCCCAGTTCCTGGGGGGCTAGGGTGGCAGAGGCCCTGGGACCCAGGAGTGAGGGTAGCTCTTGTCTCCTCAACCCAGTTGGCTCACCAGCATTTCCAGGGTAGCCATGACCCTCCAACGTGGCCACACATGGAGGCTGGTGTTGCCAAACCAGGCGGGGAGCTGGCCTGGAACTGGCCAGAGCCACTGTGGGTGCGAGAACTCTCACGCCTCTGTCCATCAACTGTGGGTCTTGGTCATGGTCTTAGAGACCTCTGATTGCCTCCTTGACGCTCCGTGGCTTGATCTTCCAGAGTGAGGAGGGAGAAAACATACCTCCTCCTCCCCCCAGAACTACCAGCTGGGGCTTTGGGGAAAGCTATCCCCTTTAGATTGAACTGCCTGTCCATGGGGAAGCTGGACCCGCCTCCTGAGACCTGGTGCAGTGGCTGCCAGCAGTTCTGGCCTTCCCCGCCCTGGAGTGACCGGCCACAAGCCCTGGGGAGGAGAGGACCCTCTGAGGAACTCCTCCACCACCAAGGACTGAGGGACAGAAACACCCTTTCTCCTCGCAGCCCTCGAGACCTAGAGGACCCGTCATCTTGACTATGACGCTCCATGTGGCCCCACCTCTCCTTTCCAGACCTGAGTTCGCTTCCTTCAGCAAGCACTAACTCACAACATCTCGCTGTGGACGCCTGTAAATTATTGAGAAATGTGAAATGTGCAATCTTGAAACTGAGGTGTTAGAAAATTTGATCTGTGGTGTTTTGTTCTGTTTTTTTTTTTTTTTTTTCTTAAAACAACAGCAGCGTTATCTTGGCTCTTTGTCATGTGTTGATGTGCGTGGTTGGTCTTGCACAGTCTGGGGCTGAACGGTCAGTTGTCCAGGAGAGAATCACTCATGGCAGAAACTGAGTTCCTCCCGGTCCCAGAGCCCTGAGGGTGGGGCAGACGGTTCCAGGTTGGCTGCTCCATGGAGACACTTAGCCTTCCCTCCACGTGGCTGGTTCTTCTGCTTCCTGAGCCCCCAGTGTGGTAAGTCTGAACCTGCCCCTATTTCTCCAGGCTGCCTCCTTCTCCACAAGGTCTGGTTGAGACCTCATGCCTCAGTATGCTTACCTGTAAAGAGGGGGGAGGAAAGACGCTGTCCCTCCCCTCCATCTCTCACAAGCACTTTAGGGCCATGCAGGGTAGGAAGCTGTGCCTGGCTGTACCCCCCGTCCCATCCCCTGTCATTCCAGCTCTCTGAAGACAGAATCTTTCATTTATGTTCCCAAACCCTATTTGGATCAAACTGGAATAAATCAAAGACAGCCAGGAGGCCTGGACATCTGTGAAGCCAGGAATGACCCACCGTCTGTCCCTCTGTCTCAAGAGGTTGGGCAGAGGCTCTGACCCCATTACCCTCAGAACCCTGGCCCTTCCAATTCAGTGTGGCAGCCTAGCTGGGCCCAGGGCAAGCAGGTGTCATAAGCCCTGTTTATTCAGTTTTCCCATGTAACTGATCCACTCTCAGAGCTGAGATGCTAATCTTCACTGCCCCCTGGGTCCAGCCATTGGATGCCCAAGGGAGTCCTGGCACAGGCTGTCAGAGCCAGAAGCTGAGCCATCCTGCCCATCAGCAGGTCCTCCAGGTGGAACCCTGGGAGGCCAGCACAGACCTGCCTCTCTGGGGAACAGTGATTTGTATTACATGATGGCATCCAGGAACTGGCTGAGCCAACAGGCCATGTGAGCAGCTTTGGCCCCATGAGCCGAGTTGTGGCATCTGGGAGCTCAGTGTCCCAGCCACCTGGCTCGAGCTACTTCCAAATTCCATAAGGTTGGCTTGTAAACCCTGGTCTCCCTCTCTTTTACCCAGAGAGAGCACACGTGTGTGAGCACACACAAGCACATACAGAATTTTAAAAGAATGTTTTCTTGGTGCCACTTTAATTTTATTTTGAATTTTGGAAGAGGAGTAAGGAATGAGGCCAAGGAAGTCATGTAGTTTAGACTTAGCCTGGCAGCCTGGAGATTCCCATACCTTGTGTATCGAACCCCAGGAAAAGGAAACGGTCCAAACAACAGTACGGAAGGAGCATGGTTTTGGGAGTTTATTTTCAGACTGTGGGGAAGGAAACAGGCCCCATTTTGTATATAGTTGCAACTTAAACTTTTTGGCTTGCAAAATATTTTTGTAATAAAGATTTCTGGGTAACAACAG EMBV3_23757 GGCCCTGAGGGTCCTGAATTCCTACTGGGTTGGTGAAGATTCTACGTACAAATTCTTTGA Gene GeneID:100301369|LOC100301369:XM_002697537:293_cdna Constitutive 0 NULL GeneID:100301369 23 GENE LOC100301369 NULL similar to ribosomal protein L15 EMBV3_08013 TCTTGTCTCCCTCTTCTATGCTGTAGTCACCCCCATCCTCAATCCCATCATCTACAGCCT Gene GeneID:100300211|LOC100300211:XM_002697399:73_cdna Constitutive 0 NULL GeneID:100300211 23 GENE LOC100300211 NULL similar to olfactory receptor 17 EMBV3_30885 TCTTTGGCTCCCGTTCCTACTTCTTCGACCGGGCACACTGCGAGGATGAGGGCTGCTCTT Gene GeneID:505015|GPR137:NM_001113295:506_cdna Constitutive 1 NULL GeneID:505015 29 GENE GPR137 NULL G protein-coupled receptor 137 EMBV3_34510 GCAGGGACCACAGAATTGGCCTCGAACACCCCAGCACTCTGGGTTTTAAATATAAAGCAA Gene GeneID:785825|LOC785825:XM_002684711:43_cdna Constitutive 0 NULL GeneID:785825 1 GENE LOC785825 NULL similar to Cell division cycle associated 7 EMBV3_10994 AGACCGGGTTCTCAAATGCCCGAGAAGGAATATGGAAACTTGCTGTGAGCACTGAACAAC Gene BVV0102_424561 + 0 NULL GK000030.2:74436382-74782959 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36831 CAGAGGTGTTTCTCCAGCAGTGAGGTAAAGATCTAATGGAATGTGCTCCTCCTCACACCC Gene BVV0102_264778 + 0 NULL GK000014.2:26500190-26631186 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11263 ATGCACATCGCCCACATCGCTGAGCTGCTTGAGGTCTTTAATCTGTGCATGATGGTGGCC Gene GeneID:613985|LOC613985:XR_084163:2_cdna Constitutive 0 NULL GeneID:613985 8 PSEUDO LOC613985 NULL similar to Rho-related BTB domain containing 2 EMBV3_20927 CATAAGCGAGTGGGTCGAAACCTGGATTGAATAAATGACCAGTGCTCTCCGTACCTCCTG Gene BVT0102_178743 + 0 NULL GK000003.2:69916334-70224344 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170232 TCONS_00170227 TCONS_00170226 TCONS_00170233 TCONS_00170225 TCONS_00170234 TCONS_00170237 TCONS_00170236 TCONS_00170230 TCONS_00170229 TCONS_00170224 TCONS_00170228 TCONS_00170235 1 XLOC_103539 NonCoding TCONS_00170232 XLOC_103539 NonCoding NonCoding - 3:69918514-69923034 - TSS127252 1188 1 TCONS_00170232_2 111 3 0.737773843770746 0.00465705188847686 0.00200667547056774 0.00298253667960839 0.00113287559261307 0.000203510172964645 0.00128008115974652 3.32359278729715e-10 0.000147759939458289 0.000220636047938513 1.00349947012781e-52 0 1.4816674704357e-16 9.07031687364508e-06 7.24527717690115e-19 4.35206033231866e-13 0 0 0 0.00362094577189392 0.00561920818325215 0.00232229245184268 0 0 0 0.00527184882733898 0.000296172463046522 0.0015320507177451 0 1.52199598512783e-38 0 0 noncoding 1 0 1 1 -1.74564829758587 0.00620275012747935 -0.0752422207753055 0.15303468859346 GCGTGGAGGTGGGAGGAGGCGAGTGATGCGCAGGTGTTTGCTGTGAATGTCAAGGCTGAGCGTCCTTCTCGTCCAGGGCCCAACCACCTTGTGATCCCCAGTCGAGGGCGAGCAGGGGGTCTTTCCTGCACAGTGGCCCCAACTTCTTGGAGCTCTCGTCACACTTCTTACCCAGGCTTCTCCTCGGCTCAGACAATGGAAGAGTTCGCCTGATGCTTCGCAGAGTACCCCTTCCTACCTTAGGTGCTTGTGCTAAAAGTCAGGACTCTTTTTGTCTATGGAATGAGGGTTTTTAGCTCCGACCCCAACTGAGACCAATTTTGGTCGCGAATAAGGATAGACCAAAAAAACATCATCTTGTGTGTCTGCAGGTGGGTAAGGAATCGCCGAGTTGGAGCGATTCCTGCCTACTACCTTGAAATTTCTGGAATGCCCACCTCTTCTTAAATGAAAACCGGGCAATCTTCGGAATCTCGCTTCCTGAATCCGCTACCGCCCCGGCTCTTAGCCCTCCCACCAGCCTTCCACGCGCTCGAGTCAGACTTGTGTAGACATGGGGGAGACACTGCTGCGACACGGACGAAAACACAGTCAAACGAGACGCGTCCAGGACTCCCGGGCTCGAAGGCACAGGGCCAGTACCAGCGACTGGGGCCCTGCATCTTCCCGGGCCGGCGGCTCTCGCTGACCACACCCCTACCCCTAGGTATCCGCGCCAGGGATCGGCGAGAGGACGGTCGGAGGGTGGAGGGCGAAAGACCTCTGAGCGAATCCGATGACTAATCATAAGCGAGTGGGTCGAAACCTGGATTGAATAAATGACCAGTGCTCTCCGTACCTCCTGCAGTGTAAAGGTCGGCGGGCACTCACTTCCTGAACTTTCCTCTGGACACTTTGACCAAAGTTCGGGTCACTGAGTCTCCGGAGTCTACAGAAGCCTCGGTGCCCAGCTCCAGCTGTGCAGTCATGTCGCTGCACCCTGTAACACCACTACTCCGGAGAAGTCTTTACAAGTAGTTTCCCTCCTAGAGAAACAGGTGAATAAAATTGACTCCAGCAGATCTTTGACAGCTCCAGGCTTCTGTCACTCTGGAGGCAGGAGCCATGTGCTGTTCTGACTCTCTAGAACCTAGTTCAGTATGTTGGCACTGGGCAATAAAGGATGGCTTTTTGAATGAAAAACTACAA TCONS_00173679 TCONS_00173680 r 5' 179 TCONS_00173679 TCONS_00173680 r 5' 179 EMBV3_05229 GCCTTCAACCATATCGAATTGAATGGCACAGATCAAAGCAGCAAGATCAGTGGAACTCGT Gene GeneID:615734|SLC5A8:NM_001164861:70_cdna Constitutive 0 NULL GeneID:615734 5 GENE SLC5A8 SMCT1 solute carrier family 5 (iodide transporter), member 8 EMBV3_06038 GAGTAGTCAAAAGAGAAGAAGGCAATCAAGCCAGTAATCAAATTCCCAAGTGAAAATGGG Gene BVV0102_368612 + 0 NULL GK000030.2:85015655-85042814 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16399 AGTTCCTGAGGACTTCCCTCGGAGGCCGGTTCCTGGTGTACGAGTCCTTCCTCTACAGGA Gene GeneID:531821|FLYWCH1:XM_002697933:598_cdna Constitutive 0 NULL GeneID:531821 25 GENE FLYWCH1 NULL FLYWCH-type zinc finger 1 EMBV3_39924 CCTGCCTTCCTGGCCCTCAGAAACAAGGTCGATTTGGAACCACTGCTTGGGTGTTTGTTT Gene GeneID:512349|MGC154957:NM_001101954:81_cdna Constitutive 0 NULL GeneID:512349 19 GENE MGC154957 NULL hypothetical LOC512349 EMBV3_34545 GCACACCGATGGGCAAAGTGGGAGACAGTTGCCATCCGATGACTCGTAAAAACCATTTTG Gene GeneID:387602|PROK2:NM_199445:5_cdna Constitutive 0 NULL GeneID:387602 22 GENE PROK2 Bv8 prokineticin 2 EMBV3_38275 CAAGTTCGCTCATCTGGGAAAGCTCTCATTTTCATCTGGATCCTGCCATGCTCTCCAGTC Gene GeneID:100300265|LOC100300265:XM_002687106:419_cdna Constitutive 0 NULL GeneID:100300265 4 GENE LOC100300265 NULL hypothetical protein LOC100300265 EMBV3_43166 ATTGACAGGAGCTCATCAAACGCCTCCATACCTACACTGAAACCAAGCACCACACAAGGG Gene BVT0102_017591 + 0 NULL GK000030.2:137714933-138322945 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00152753 TCONS_00063037 TCONS_00230737 TCONS_00116428 TCONS_00175042 TCONS_00152743 TCONS_00218448 TCONS_00210177 TCONS_00098386 TCONS_00232348 TCONS_00186108 TCONS_00248863 TCONS_00110373 TCONS_00252934 TCONS_00124583 TCONS_00109859 TCONS_00251760 TCONS_00009883 TCONS_00252675 TCONS_00218891 TCONS_00010052 TCONS_00252013 TCONS_00175545 TCONS_00011804 TCONS_00248811 TCONS_00040583 TCONS_00208127 TCONS_00251524 TCONS_00021596 TCONS_00244654 TCONS_00234064 TCONS_00107584 TCONS_00207068 TCONS_00066192 TCONS_00020651 TCONS_00189806 TCONS_00206861 TCONS_00199595 TCONS_00062743 TCONS_00007555 TCONS_00078479 TCONS_00063180 TCONS_00030202 TCONS_00153219 TCONS_00185807 TCONS_00252056 TCONS_00229410 TCONS_00124845 TCONS_00141421 TCONS_00199062 TCONS_00046724 TCONS_00025644 TCONS_00047865 TCONS_00006827 TCONS_00160965 TCONS_00022065 TCONS_00142489 TCONS_00218865 TCONS_00197184 TCONS_00249012 TCONS_00031911 TCONS_00119942 TCONS_00066285 TCONS_00219174 TCONS_00055388 TCONS_00222115 TCONS_00110415 TCONS_00233344 TCONS_00188225 TCONS_00221977 TCONS_00178694 TCONS_00175199 TCONS_00224114 TCONS_00250938 TCONS_00046756 TCONS_00010780 TCONS_00223365 TCONS_00249570 TCONS_00209529 TCONS_00010588 TCONS_00218178 TCONS_00156845 TCONS_00222010 TCONS_00007432 TCONS_00115687 TCONS_00251705 TCONS_00030297 TCONS_00231502 TCONS_00229680 TCONS_00177841 TCONS_00165813 TCONS_00209829 TCONS_00161792 TCONS_00252354 TCONS_00023615 TCONS_00007360 TCONS_00057311 TCONS_00148453 TCONS_00135547 TCONS_00009945 TCONS_00252954 TCONS_00218899 TCONS_00251930 TCONS_00219680 TCONS_00220882 TCONS_00073576 TCONS_00065249 TCONS_00040195 TCONS_00218856 TCONS_00123618 TCONS_00039853 TCONS_00238420 TCONS_00251846 TCONS_00186849 TCONS_00072815 TCONS_00177280 TCONS_00040147 TCONS_00148279 TCONS_00231613 TCONS_00187057 TCONS_00039908 TCONS_00125001 TCONS_00229751 TCONS_00245928 TCONS_00080765 TCONS_00070957 TCONS_00244651 TCONS_00056728 TCONS_00037933 TCONS_00032156 TCONS_00157440 TCONS_00006026 TCONS_00231487 TCONS_00136896 TCONS_00251627 TCONS_00066279 TCONS_00064461 TCONS_00219970 TCONS_00056819 TCONS_00007719 TCONS_00238326 TCONS_00038667 TCONS_00166733 TCONS_00019198 TCONS_00156732 TCONS_00040178 TCONS_00040745 TCONS_00201770 TCONS_00244653 TCONS_00185942 TCONS_00056147 TCONS_00054954 TCONS_00088288 TCONS_00239418 TCONS_00190322 TCONS_00116101 TCONS_00071079 TCONS_00070840 TCONS_00010472 TCONS_00030941 TCONS_00123170 TCONS_00040698 161 XLOC_155966 XLOC_092518 XLOC_037764 XLOC_140227 XLOC_070595 XLOC_104825 XLOC_092508 XLOC_131768 XLOC_128687 XLOC_058632 XLOC_141833 XLOC_112161 XLOC_151806 XLOC_066277 XLOC_155875 XLOC_076127 XLOC_065763 XLOC_154701 XLOC_005436 XLOC_155616 XLOC_132210 XLOC_005604 XLOC_154954 XLOC_105326 XLOC_007354 XLOC_151754 XLOC_024399 XLOC_126640 XLOC_154465 XLOC_012269 XLOC_150512 XLOC_143543 XLOC_063494 XLOC_125587 XLOC_040909 XLOC_011326 XLOC_115843 XLOC_125381 XLOC_121248 XLOC_037470 XLOC_003116 XLOC_047367 XLOC_037907 XLOC_016457 XLOC_092984 XLOC_111860 XLOC_154997 XLOC_138905 XLOC_076388 XLOC_085849 XLOC_120715 XLOC_026863 XLOC_014797 XLOC_027997 XLOC_002389 XLOC_097858 XLOC_012736 XLOC_086914 XLOC_132184 XLOC_118846 XLOC_151955 XLOC_018156 XLOC_073015 XLOC_040999 XLOC_132493 XLOC_033196 XLOC_135424 XLOC_066319 XLOC_142826 XLOC_114268 XLOC_135286 XLOC_108467 XLOC_104982 XLOC_137410 XLOC_153881 XLOC_026895 XLOC_006331 XLOC_136665 XLOC_152513 XLOC_128040 XLOC_006139 XLOC_131641 XLOC_095305 XLOC_135319 XLOC_002993 XLOC_069856 XLOC_154646 XLOC_016551 XLOC_140991 XLOC_139174 XLOC_107614 XLOC_100653 XLOC_128340 XLOC_098677 XLOC_155295 XLOC_014282 XLOC_002921 XLOC_035110 XLOC_090333 XLOC_081770 XLOC_005497 XLOC_155895 XLOC_132218 XLOC_154871 XLOC_132999 XLOC_134199 XLOC_045340 XLOC_039971 XLOC_024012 XLOC_132175 XLOC_075170 XLOC_023670 XLOC_145087 XLOC_154787 XLOC_112900 XLOC_044583 XLOC_107054 XLOC_023964 XLOC_090161 XLOC_141101 XLOC_113105 XLOC_023725 XLOC_076544 XLOC_139245 XLOC_150855 XLOC_049649 XLOC_042734 XLOC_034531 XLOC_021762 XLOC_018399 XLOC_095895 XLOC_001589 XLOC_140976 XLOC_083107 XLOC_154568 XLOC_040993 XLOC_039185 XLOC_133287 XLOC_034622 XLOC_003279 XLOC_144993 XLOC_022490 XLOC_101569 XLOC_009878 XLOC_095192 XLOC_023995 XLOC_024559 XLOC_123415 XLOC_111995 XLOC_033950 XLOC_032763 XLOC_053075 XLOC_146084 XLOC_116357 XLOC_070270 XLOC_042852 XLOC_042617 XLOC_006023 XLOC_017192 XLOC_074724 XLOC_024514 Coding TCONS_00223365 XLOC_136665 NonCoding NonCoding - 7:99197616-99198194 - TSS167363 578 1 TCONS_00223365_1 46 0.998269896193772 1 0 0.000120648814424882 6.20409940898881e-05 5.51405551987913e-05 7.67844353482926e-05 2.53681650352793e-05 0.000349004910194905 6.67386467464298e-05 9.48956839952509e-05 0.000136259884344415 0.000309839721293351 0.000106745086248943 9.34329214631254e-05 5.07325207223975e-05 7.83485220371222e-05 0.000264162962598948 0.00439530801700214 0.00120968757694069 0.0042704637380745 3.04795312933588e-05 4.11579086485804e-05 7.71600047162288e-06 0.00131452670583257 0.00344702967144713 0.00588780578812554 6.32849547407575e-05 8.55096297502652e-05 7.47435494178299e-05 0.000452121394965465 0.000429115516678603 0.00059472107130323 XM_001250798.4 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant 2, mRNA. 2e-13 80.6 94.23 0.0882352941176471 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 ACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATGGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATTGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATGGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAG TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 EMBV3_05591 TCCACAAAGGAGCTCCAGGATAACATAAAGGGGATAACATTAACAACTCAGCAAGTAATA Variant GeneID:507535|SLC17A1:XM_002697531:276_cdna 208^441 1 EMBV3_36982 GeneID:507535 23 GENE SLC17A1 NULL solute carrier family 17 (sodium phosphate), member 1 EMBV3_05504 GATGAATCATCACAAGTACCGCAAGCTGGTCAAGATCTACCTGAAGGGCAAATGAGTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18446 GCACCTCCATGTGTTCAACAACCCAGAAGCTCGCCACACCTCTTCGCTTAGGGTTTATTT Gene BVV0102_300696 + 1 EMBV3_11024 GK000020.2:41042095-41122022 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117278 1 XLOC_071444 NonCoding TCONS_00117278 XLOC_071444 NonCoding NonCoding - 20:41105293-41106110 - TSS87746 817 2 TCONS_00117278_2 55 0.886168910648715 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.12289372907547e-05 0.00038987642878749 0 0 0 0 0 0 XM_005223810.1 SLC17A4 PREDICTED: Bos taurus solute carrier family 17, member 4 (SLC17A4), 2e-15 87.8 70.87 0.22766217870257 XR_247716.1 LOC101928940 PREDICTED: Homo sapiens uncharacterized LOC101928940 (LOC101928940), misc_RNA. 8e-20 102 75.95 0.187270501835985 0 noncoding 0 0 0 0 -0.000817565067301629 0.993583511659012 0.0372767600826647 0.584181828407733 CTATTTGGTCTCCAGCCTGTTTGGTACCTGGATTTCTGAAGTGGTAAGTGTCTTGCTGTTTGCTAATGAGATGACTGGGAGCTCCTGGACAGCCTCAGGGTGGGGGCTGATTGCCAAGGGAACCAAGCTAGTGATTAGAGAGTTGGAACTTTCAGCTCCACACCTTAATCTCTGGGGAGGAGAGATGATCAAGTTAATCACTATAGGCCAACGATTTAATCAGTTGTGTCTACAGTAATGGGGTCTTCATAAAAAATAAATGAAAATAAACCCTAAGCGAAGAGGTGTGGCGAGCTTCTGGGTTGTTGAACACATGGAGGTGCCAGGAGGCCCTGTTCTCCACCCTGGGCATCTCCTCCATCTGGCTGTTCCTGAGTTGTATCCTTGTACAATGCACTGTAATCTAGTGAGTCAACTGTTATTCTGATTTCTGGAGCTGTTCTAGCAAATTATCAAGCCTCTAGTTTATAGCTGGTCCATCAGAATCACAGGTGACAATCTGGACGTGTCAGCATCTGAAGTGGAGGAGGGAAGTCTTGAGGGCCTGAGCTCTTAAACCTCTAAGATCTGACTCTAATTCCAGGCAGTGTCAAAACTGATTTAAAGGACCCATAGTTGGTGTCTATAAATAACTGGAGAATTGCTTGCTGTAAGGGAGGGATAAAAATTCGTATTACGAGACCAGACGAATTTTTCCACACCAGTTTTTCCCTAACACCAGTGCCTAACACAAAGCGTGGTACTGGTCCAAAATGAATTAAGTACAGAAACTGAGAGTAGGTGCCCAGAAACACTTTACAGGAACTTGACATTGGTG TCONS_00115090 . 3' 4038 TCONS_00115090 . 3' 4854 EMBV3_01072 GCAAACTGCAGCCATCAAGTACAACAGGAAATGGCAACCACTTTTGCTCGCCTGTGCCAA Gene GeneID:515180|MFN1:XM_002684903:32_cdna UTR3_Alt 3 NULL GeneID:515180 1 GENE MFN1 NULL mitofusin 1 EMBV3_36232 AGAACCCTCTTCAGCTTCAATTCCCGGTTCTTAACCCAGTGCCTGACCATTAGTAGTTGA Gene BVT0102_143152 + 0 NULL GK000007.2:27733588-27820354 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14600 TGGAACACAGATGCAGTTTTGCCCGAAGGCTATGTTACCTCTCTTGCCATCTTGTAGTCC Gene BVV0102_105244 + 0 NULL GK000001.2:147840904-147856756 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005614 1 XLOC_001322 NonCoding TCONS_00005614 XLOC_001322 NonCoding NonCoding LOC100847825 1:147852340-147856272 = TSS2786 784 2 TCONS_00005614_2 93 0.441326530612245 2 0.801068430424828 0.000381793482334995 8.97182121404387e-05 0.000342303643499606 3.17760882948824e-05 0 0.000104938790464469 0.000156206980437952 0.000165974077021449 6.0383662501245e-05 6.29769067682442e-05 2.6278925805655e-05 0.000164189548912277 0 1.20000273596222e-05 2.50316081179744e-05 0.00225711229693695 0.00243528358735104 0.00403246781283642 0.00100612579064223 0.000889755499909474 0.00057694387055989 0.00186463371229402 0.00121696613054463 0.00166790895799755 0.000344657187029042 9.88522060210702e-05 0.000119574511157871 0.000183772483438975 0.00127557147126581 0.000927910701025934 NR_045647.1 LOC100847825 Bos taurus uncharacterized LOC100847825 (LOC100847825), non-coding 0.0 1415 100.00 0.998724489795918 0 noncoding GCGGACTGGCCCGAGCGCAGGCTCGGCTGAGAGGGCGGTCACTTCAGTGTTGGGGTCTCGGGCACGAGGCCTCTCTCAGCCCATGTACAGTGGGCCGTTGGACTCAGGCGGGCGTCAGTGCGCGGCGATCCCTCAGGCTCCTCGGCGGGCGAGCAGCGGGCACTGGTGTGGAGTCCGCGAGGATGGTGGGGCGCAGCTGAGATGGAGGACGTTGAGGCTTCCGGGCGCGCTGGGCCTCCTCTTGAGGAATGCGTCCACATGCTTTCCTCCCAGCACGGGCCTCACTCATGAGGCTTTTCACAACTCTCAGGAGCCAGCTGGACACCCCGGGCCCCTTTGGACGTCCTTCATAGACCCGTTATGACGTGTATTAGTCCAAGTGCTTTTCAAAACAGCCTTGGAAGGAGCTCCAGCAGCAATTTCAGACGGAAAAAAGGATCAGGACCATTTCACATTCACATGGAACACAGATGCAGTTTTGCCCGAAGGCTATGTTACCTCTCTTGCCCTCTTGTAGTCCAAAGACTTCACCATCCTGAAGAATATCACACTGCTCCATTACACCAATAATATTACAAAGATGCTGGAGGCCTTGGTAAGATACAGGTGTTCCAGAGAGTAGCAGATAAACACTGTGAAGATTCAGAGACCTGCTACATTTGTAACATTTTTAGGGATCCAGTGGTCAGTAGTGCCCTAGGGCATCCCTTTCAAAAGGCAAAGACAATTATTGCATCTTGCACCTTCAGCCATCAATAAAGGAAGATACTTTTGGGTCTTTTCA EMBV3_09841 TTCCCTGGCTCCATGTCCCATCTCTGAAGATCGACTGTGAATATGTAAGCTTCTGCCACC Gene GeneID:511564|FAIM3:XM_002693895:220_cdna Constitutive 0 NULL GeneID:511564 16 GENE FAIM3 NULL Fas apoptotic inhibitory molecule 3 EMBV3_39905 CACAAGGGAAAGGGACAGATAAATGGCCTACGCTGAGGGCTCTTCTAAACTTGAAGGTGA Gene BVT0102_091557 - 0 NULL GK000020.2:32618896-32683995 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29066 GCCACAATTCGTGCGCCAAGCAGGAAGTAAAACAACTGCCCGAAACCTCTCTCTCATCCT Gene BVT0101_058786 + 1 EMBV3_25467 GK000005.2:55864961-55959927 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195039 TCONS_00195040 TCONS_00195038 1 XLOC_117901 NonCoding TCONS_00195038 XLOC_117901 NonCoding NonCoding - 5:55954773-55959403 - TSS145406 1412 2 TCONS_00195038_5 122 0.226628895184136 3 0.695614603586088 1.32685354460707e-10 1.00329234592927e-16 7.56598172620289e-05 0.000266078913604931 0 3.08487427222542e-94 2.19896959407692e-06 2.68369242484589e-08 0.000152503677954727 0 5.65909620408483e-10 1.0036969954847e-09 8.06662266687404e-10 1.31853476250689e-09 0 9.78732429842364e-62 0 0 0.000488611259373418 1.9234659204925e-09 8.19995641590019e-10 0 6.59346142142739e-05 0 0.00153222679275778 0.00041876055339269 1.5103691680359e-09 0 0.000213028600921694 6.50020930327687e-09 0 noncoding 0 0 0 0 0.00313674011887391 0.98047862126081 0.0658692462450664 0.446795712526555 TCCTTGCTCTGTATCGGGGTGTTCTTGTCTGGGTATCTCTACCCGCTTACGGTGGAATGGTTGCGCCCTTCGGGTAGCCAAGCAAGCCTCCAAGCATAAGTCAGGTCGGACCAGGATGAGAGAGAGGTTTCGGGCAGTTGTTTTACTTCCTGCTTGGCGCACGAATTGTGGCCCCCTCGTTTCACGCCCCAGGCACTTTGCTGCTGGCTGTGACTCCTGGACTCAAGATGGTGAAAGATATACATTTGTTCCCAAGAAGTGGAAACTCCAGAAAGGCAAATTTCAGTTCAATATGTCTCTTCCAGTGAGCTACAGCTATCCACAGGTGACATGGGCGCCTTAGGAGGAATGGAGCTGTTCAAGTCAAGGCTGGGGAGAGTGATGTCCAGTGAGATTGCACTGAGTGACTTCTGAGCTATTTCCAACCTCCATAGTTTATGATGAATGAAACTTACGCTGCCAAGGAAGAAACTCTCTGGAAGATCAAGATTTCTCTGGCCCCTGGGAGGTTGGGGCAGCTGACGGCCTTCCTGCTGTAGTTCCCATTGCCCAATATGCACCAGGTCTCACTGGGGGTTGCCTGCCAAGCAGGTCACATCTTAAACTGGCTCCCCATGAGGACAGGTTACCGTGAGGATTAAATGAGATAATATGGGAAGCACTGAATGCCTGATACACTGGAGGTGCTCAATAAATATGACTTTCCTCATCAACCTTGCCCTCTGCATCCATCATCTGCCCAGTTCCCCAGGCCAGGAACCTGAGGTCATCCAAGACACCTTCTCCCCACTCCTCCCCACTCCCCAATCCATCCTGAAGCCAAGTGGCTGTTCCCCTCACAAGTATTTGTCAAGCCTTTTCATTCTTCCGGTTCCCACTGCTGCTATCTGGGAGGAGGCTGGCAACAGGCTCCTAATCAAGCTCTCTCCTGCTCTAGGGCCCGCATCCAAATCCATCCCCAGTTCTCCTGGAAGATGCAAATCTGATCCTGGCTATATGAAATGATTCAGCAGTTCCCCAGGACTTTCAGAACAAACTCAGATGCCTGGCTCTGGCTCCTGGTGGCTCACCCGCCCCATTTCTCACACACCTTCCTACACTCCCTGGTGCTTCTGTCCCGAGGAAGGGGTCACCTGTGGTTCTTTGGCACTGTGTGCTTCCATGCTTTTGCACCCAGGGTTCTTTCTGTCTGGAGGCCCTACCCCCTCCCCGGTGCAATGACGCCTCATCCTTTTAAAATACAATTCAAGTGCCACCTCTTCCTCAAAACTTCCCAGGTCCCAGCTGGACTTAGATGTGCTTTACGTATTTCTCTGTGCTCCAGTATTTTCATTCTGCTTTACTTGACTGTTGTCCCTGCTCCAGTGTAAGCTCCTTGAGGGCAGACGCTGTCTTTTTTCCTCCACACCCCT TCONS_00191874 TCONS_00191875 TCONS_00191876 TCONS_00191877 r 5' 4367 TCONS_00191874 TCONS_00191875 TCONS_00191876 TCONS_00191877 r 5' 525 EMBV3_22174 GTGATCAGTTTGAATCTATTTGGTGGGATGAGAGAGGCACATGTATAGTGATCCACGAAG Gene GeneID:785656|LOC785656:XM_002684011:2_cdna Constitutive 0 NULL GeneID:785656 Un GENE LOC785656 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_15385 CTTTGGTCGTGGTAGTCCAGTTTTCCTAGTAACTTGGTTAATGTGCTGTGAACGATTGAC Gene GeneID:614915|HMGN1:NM_001034772:45_cdna Constitutive 0 NULL GeneID:614915 1 GENE HMGN1 MGC127465 high-mobility group nucleosome binding domain 1 EMBV3_33416 CCGGGACTCATTCCAGATGCAGATGCTGTAGGTGTAACAGTTGTGCTAATAACGTGCACC Gene GeneID:618099|ASF1A:NM_001076493:20_cdna Constitutive 0 NULL GeneID:618099 9 GENE ASF1A NULL ASF1 anti-silencing function 1 homolog A (S. cerevisiae) EMBV3_22847 CTTCTTGGAGAGGCAGAAACACTGCTGTGGAAAGAAATTGAAAGGCACCTGGTTGCAAGC Gene GeneID:527428|RABGAP1L:NM_001103263:154_cdna UTR3_Alt 2 NULL GeneID:527428 16 GENE RABGAP1L MGC157039 RAB GTPase activating protein 1-like EMBV3_21422 CCCTGGCAGTCCAGTGATTAAACTAGGTACTCTTACTGTGGTGGCCCAGTTCCAATCCTT Gene BVT0102_075002 + 0 NULL GK000008.2:63635765-63650014 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23328 CAGGAAGGTTGGGAAGGCTTCCTGGGGGAGGCTGCCTTGCATTTTCACATCTTTCAAGAT Gene BVV0102_031323 + 0 NULL GK000022.2:59675909-59687635 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131828 1 XLOC_080533 NonCoding TCONS_00131828 XLOC_080533 NonCoding NonCoding - 22:59685701-59686591 - TSS98695 890 1 TCONS_00131828_2 94 0.362921348314607 1 0 2.18389919229712e-06 0 0 9.33051165799015e-07 0 0 0 0 0 2.31151397693685e-06 4.62980525846312e-05 0 2.93083145947291e-07 0 0 1.48380005000924e-05 3.73085410425421e-06 0 0 0 0 8.33783823557131e-06 0 0 0 0 0 0 0 0 XM_005224063.1 AQP4 PREDICTED: Bos taurus aquaporin 4 (AQP4), transcript variant X1, 7e-66 255 87.16 0.237078651685393 0 noncoding 0 0 0 0 0.11168342180717 0.332350465611745 0.0310832601933817 0.610438038318956 CTTTTTTTGAATATAAATTTATTTATTTTAATTGGAGGCTAATTACATGTTTCTTTTAAAGAGAACTTTATACCACTAACATAGATGGGAAGCTGCAGTCACTCCCCTGAGTCAAATGTCCTATAGAAATAGATATACTGCACACACAACTAAGGTCTTTGCTTTTAGCTCGAGGCTGATGCAGCTCTTTGTTAAAAAGAAGGATCAGAAAGCATTAAGGTGGCTCAGTGGTAAAGAATCTGCCAGCCAATGTAGGAGATGGACAGAGGAGCCTGGCGGGCTATAATCCTTGAGGTTGCAGAGTCAGACACGCCCGAATGACTAAGCATGCTTGCAAAATCTTGAAAGATGTGAAAATGCAAGGCAGCCTCCCCCAGGAAGCCTTCCCAACCTTCCTGGTCCTCCTGCGCTCGGGACTGAGGCTCGTGGAGGGCCTGCAGTCCAGTGTGGGTACTAGTGTGCTTGCTGTGCTCAGTCGCTCAGTCGTGTCCGACTCTGCGACCCCGTGGACTGTAGCCCACCAGGCTCCTCTGCCCGTGGGGATTCTCCAGGCAAGAACACTGGAGTGGGCTGCCATGCTCTCCTCCAGGGGATCTTCCTAACACGGGATCAAATCCAGGTCTCCCGCATTGCAGGCGGATTCTTTACCAGCTGAGCCACCAGGGAAGCCCCGGGATACACTGCACCCTCCGATAAACGGGTTGACCTGCGGTTCTGTGCACAAGTTCCTGGAACCCCGAGGGCCGCTGCCTCTGCAGAGAGGCCCTCCAGGGGCTGCACACAGGGATAAGCCAGGCTATTTTCACCATTTCCTTCCTCCCACTGAGGCAGGGGTCACCGTCAGCTGCTTCACACAGCGTGGCCAGCCACCGTGGCTTCGGCCAAGACAG TCONS_00127672 . 5' 1045 TCONS_00127672 . 5' 1045 EMBV3_14310 CACAAGGGACGCCGGGTAGCCTCTTATTTTGCTGATAGTTTTCTTCAGTGTGCAAAAGCC Gene BVV0101_001685 + 1 EMBV3_06340 GK000007.2:43508497-43548897 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39816 GACATTAATCCCAAAGTGCTTCAACTCCTCAGCAGCGAGAAAATCCAGTACGGCGTTCCG Gene GeneID:525975|MYO1H:XM_002694600:705_cdna Constitutive 0 NULL GeneID:525975 17 GENE MYO1H NULL myosin IH EMBV3_25512 TTTGACGCGTTCCCCAACATCGAGAAGGTGTCGAAGATCACGTCGCCGGTGCTCATCATC Gene GeneID:614425|FAM108A:NM_001046536:89_cdna Constitutive 0 NULL GeneID:614425 7 GENE FAM108A FAM108A1 MGC138013 family with sequence similarity 108, member A1 EMBV3_18756 GAACCGATTCCAATTACTCCACAGATTTTCCATGGTCTGGACACCCTAACCGTGATGGGC Gene GeneID:784894|TGFBR3:XM_002686233:245_cdna UTR3_Alt 2 NULL GeneID:784894 3 GENE TGFBR3 NULL transforming growth factor, beta receptor III EMBV3_09669 CGGCTGCTCACCTCAGGCTATCTGCAGCGCGAGAGCGACCACATCCACATCATCGCGCTG Variant GeneID:540984|OTUB1:NM_001034719:95_cdna 575^658 3 EMBV3_14258 GeneID:540984 29 GENE OTUB1 MGC127210 OTU domain, ubiquitin aldehyde binding 1 EMBV3_42338 TCGGTACAGATCTGACGACACTTTGGACAGAAATGTGTCCACGTTTCAACCACCAGAAGT Variant GeneID:784362|SCEL:NM_001102332:4_cdna 440^508 1 EMBV3_31889 GeneID:784362 12 GENE SCEL MGC166381 sciellin EMBV3_12818 AGGCTTCCAGTTCTTAAGAGTCAGAAACCAACAAGCATTGGGCTGTGGTAGCCAAAAACC Gene GeneID:616487|STAG2:XM_002707858:63_cdna Constitutive 0 NULL GeneID:616487 X GENE STAG2 NULL stromal antigen 2 EMBV3_13328 AGCTCTGGTGCCTATTTGTTGTGGACCATCGCAGTCACAGGCTGGGGAGATGTCAGGGGA Gene BVT0102_135483 + 0 NULL GK000025.2:1207352-1245668 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144124 TCONS_00144125 TCONS_00144126 1 XLOC_088465 Coding TCONS_00144124 XLOC_088465 NonCoding Coding IFT140 25:1221838-1228669 x TSS108284 2082 3 TCONS_00144124_3 70 0.122478386167147 5 0.695900439238653 2.76640822817906e-05 0.00024015003191188 8.32164406930064e-05 3.99452431462606e-09 0.000244057082907864 2.51323885059482e-11 1.48867112530713e-13 3.92269862547324e-07 4.43963498426743e-05 2.88314871516153e-05 0 1.06372379520872e-10 0.000149259202140433 0.000135344913185571 1.73790237617089e-13 0 0 0 0.000101580297380188 1.06926180518822e-85 2.26332344571727e-09 1.13119203215751e-15 0 0 9.57193112994657e-05 0.000107602096545078 0.000340166389876949 0 0 0 XM_002697913.3 IFT140 PREDICTED: Bos taurus intraflagellar transport 140 homolog (Chlamydomonas) (IFT140), transcript variant X1, mRNA. 7e-102 376 100.00 0.0994236311239193 XM_005255725.1 IFT140 PREDICTED: Homo sapiens intraflagellar transport 140 homolog (Chlamydomonas) (IFT140), transcript variant X2, mRNA. 1e-59 235 84.51 0.101825168107589 0 noncoding 0 0 0 0 0.0128444526874463 0.919457923228619 0.0286551694199464 0.733626847734377 TGTGTTCCCTACTGCTCCTTGGCCCCACAACAGCCTTGTGAAAGGTGTGTTTTCTTCATCTTGACGGCAACAGCATCCTATGAAGAGCCACGGAAGGGAAAAAGCAACCAGTCATCCAGGCCTCACTGTCCCCAGTGACCCTAACAACTGGCCAGGGCTTCTGTCTACATCAGTGACCCTGCCCCCCGCCCACAGATCACCCTGGCAGTGACCTTGGTGGCAAACACTCCGCTGACATGCATGTCTGTGCGCAGGCTGTGGGTCACCCCCGTGGACAGGAAGGACACGCTGAGGAGGCTTGGGGAGACCTGCACGGCGGCCACCTGCTGGTGGAAGTGGGATGACATGGCCTGTTCATGGAGGATGAGCACGGAGCTGATGCTGTTCACGGCCAGGAGGCTCTTCCTGGAGCCCCACTTGGTTTCCACGAGGAGAGACACCACCGAGGTATGAACAGAAAGGAGACGTGCAGTCAGGGCAACGTCACAGAGCAGAGCTGACAGGCCAGGCCCAGGATGGCAGGCGAGGAGCCCTGAGGACACAGCAGGCGTAACTGGTGAAAACTGTGAGAACACAACTGCCCATTTTTCTCGGAATCGGGCACAAAGTTAAATGGAGAAAGAAGGACTGAAGAAAATCTACTGAGTTTAGAGAGAAGAGCAGAGTCTGCGGCAGCTCAGTGGGGGCCTGAAGGGTCCACTTGTCTTTGCCCTCCGCCCCGCGGCCGTTCGGGAGGCCCGGCGCTTTTCTCCACATGGCTACTCGCCCCTTGTCGGTACCTGCTGCCAGGAGACCTACAGGGTCGGCTCTCACCTGAGCGCCGCCTCTCCGATGGCGGTCACGAGCAGGCTGCCGTCGATCAGCGCGATGTCTGCCCGGTGGCCCGTCTTCCCGCTCAGCTTCACCTGCACGACAACAGCCACCTGAGAGGAGGGTGCCGCCTGTGTGGAGGCTGTGTCGCTGCTGACGGGCTGGACTCTGCTGGCAGCAACTCCGGGGAGAGTGCCCACGCAAAGGAAGTGCGGGCGGCCCCAGCTTTTCAGGCCAGAGCAGTTAATGGAGCCCCTCATGGGGGAGGCGCCCTCACACCCACGCACAGAACCAGCGAGGGGCCAAGGGGGGATTTGAACCCAGGTCCATGGACTCAGTGACCACATTTCAGCTGCTGTGCAGACACAGGTGCACGAGGGCCCCGAACACACTGACTTTCTGTGTCTACCAGACCACCTCCAGGGAGGTTCGGGGTTCCTGAGAACCTGGAATCTGCGGGTGGAACCGAGAGACCGCAGAAGGGCAGCAAGTGGTCCTCAGGGAGCGGTGCGTGCTGCCTGACCACACCCCAGGCTCCGGGCGTCCTCCTGCGAGCAAGCCCCCAGGTCAGGGGCGAGGCGCCCACAGGGATGGTGGGGCGTTCAGAGTTGCGACCGTCACACGTGTGGACCAGCCGTGGTGGAAACACTGGTGACAAGCCCCAAGGTCTGCACGTGACCAGGCATCCCCACCACACCCCCTGCCTCCCGAGGCTCGGGCGGCCCCTTCCCCTGACATCTCCCCAGCCTGTGACTGCGATGGTCCACAACAAATAGGCACCAGAGCTCTGGTGACCCTGCAACGTGGACCCCTCAACCAAGACGAAGAGAGGGTGAGGCAGGCCAGAGGGCGGCCCTGGGGTGGCCCCACGCACCTTCATCACCTCCTCGGCCGTGCCCTCGGGCGTCACTGTGAACAGGCAGAGCAGCAGGCTGTCCGTCACCGCCACCAGCGCCCCCCTCTGCTCCAGGTAGAACAGTGTCTGGATGGAGCTGTCTGTGGATGCCACCTGGGCCGTCCTGCCTTTCTCGTCCACGTGGTGCACGGTCCCTGTGAAAGAGCCTTGTGTCCATGGAAGCTGGACGCTCCCGCGGCCATTCTACCTGCTTACGGACACTTTCAACATAAGCATCTTCATCACAATCATTTACAAATAGACCATTTTAAAAACCACTGGCAGACTTGCCCAGAGGTCCAGTGGCCAAGTCTCCATGCTCCCAAAGCAGGGGCCCTGGGTTCAATAGCTAGTTAGGGAACTAGATCCCACATGCT TCONS_00145844 TCONS_00145850 TCONS_00145850 TCONS_00145850 r 5' 0 TCONS_00145844 TCONS_00145850 TCONS_00145850 TCONS_00145850 r 5' 0 EMBV3_42002 TTGTCCTTCTCTTTTATTTGGGCGACTCGGATACTACGGAGGAGCAGAGGTAGTGGATGA Variant GeneID:507197|SHMT2:NM_001034282:956_cdna 78^355 3 EMBV3_23273 GeneID:507197 5 GENE SHMT2 MGC128707 serine hydroxymethyltransferase 2 (mitochondrial) EMBV3_41836 CCATTTCAGACTCTTGGATTCAATTCTGAGGTCATTGAGGTGAAAGTCAAAAGAAGAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40242 TCCAAACAATTACCTAGTGCCAACTGAGAAGAAACGATCTGCCCTTCGCTGGGGTGTTCG Gene GeneID:538735|HYLS1:NM_001046439:26_cdna Constitutive 0 NULL GeneID:538735 29 GENE HYLS1 MGC137589 hydrolethalus syndrome 1 EMBV3_17400 CTGACATCTGCACCGGCTAAAAGTAAGGCCTGATTCTGTTGCCTCCGTAACACCAGAAAC Gene BVV0102_214093 + 0 NULL GK000018.2:65910530-65918285 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092006 1 XLOC_056774 NonCoding TCONS_00092006 XLOC_056774 NonCoding NonCoding - 18:65913879-65914677 - TSS69352 798 1 TCONS_00092006_1 64 0.327067669172932 1 0 0 0 2.31929750004062e-05 0.000156092537088771 0 0 0 0 9.88738404342361e-06 1.54679913834534e-05 7.74535233732996e-05 0.00193122734755407 2.15735533161135e-05 5.89472503474356e-06 0 0.000463361174233144 0 0 1.79722531004494e-05 0 0 0 0 0 0 0 0 0.00010832901993816 7.30018186120375e-05 0.0001280809882014 XM_867938.6 ZNF446 PREDICTED: Bos taurus zinc finger protein 446 (ZNF446), transcript 0.0 1440 100.00 0.99874686716792 0 noncoding 0 0 0 0 0.00207572064822851 0.988837463924381 -0.0330480748088689 0.546593699961707 CCCAGTTGCTCGCTTCCCACCCCGTCTCATCTGGTCCTCGAGACCACCGAGAGCCTCTGTCCTCAGCTGGGCCTCCCTCCAGCTCCGTCTCTTTCCTCTGCCGTTGCTCCCGAATTAAGCCTGCTGGAGGCGACCTAGTGGTTGGCCGAACCGCAATCTGACGCGGGTCTATCTGACATCTGCACCGGCTAAAAGTAAGGCCTGATTCTGTTGCCTCCGTAACACCAGAAACCAGGAGAGCCTCAACGGGCAATTAGCGAATCCCCTTCCCTTGCTCCCCATGCTGTTCCTGGTAAGATCCCGAGTCAAACAGCTCCCTGGGTGCTGTTTCCCCCCCAAGCAGAGTGACTGATTCCCCCTCAAAGCCGGCAGTCACCCCAATGAGCCAGTCACACCCTCAGCAGGAGTCAGGGCCCCCCTAGCCTCTCCTGACTACAAAGCCTACCTCCCCCTGGTCCGGTGGGCACGCGACCCTGCGTGGTGGGAGGTGCTCACCTCCACGTGTTGTGTGTTCAGCCATCTTGGTAGCTCTAGGGCTGGTTGAGCAGGAGATGGTTACAACGCTGGGCCCAGGAGCAGGCTGCCTGCCCCTGCACTCGATGAAGATGCACCAGAGGCAGGTAGGGTACCGCACCCCAGAGCTGCTGAGCAAGGCTGGGGCGGGCGGGGAGAGTGGGGCAGGAGAGCAGGACGCTGGCCTGGGTCACGACTTTGAAGGGACGCCACAAACTCAGCCAGCAAAGTAGGTAAAGGCTTAATATTCTAAAAAATAAAAATGCACACATCGTAAAATGTTAA TCONS_00085098 TCONS_00085099 TCONS_00085100 . 3' 3351 TCONS_00085098 TCONS_00085099 TCONS_00085100 . 3' 4148 EMBV3_10344 CGAGACACCAAGCCGGACACTAAAACCTCTGCCCAGTCTCTTTTTAACGCTGTGGACTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10196 ACCTTGTTCACCTCAAAAGCTTTTGCACAGCAAGGAAAACACTAAGCAAAGGAAAAAGAG Gene BVV0102_041285 + 0 NULL GK000018.2:40315452-40356848 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02128 CCCAAGAAGAACAGAAGTTGAAATCTTGGCTTTCTAGAGTTCTTATTTATCCAGGATACC Gene GeneID:613723|PPBP:XM_002688351:142_cdna Constitutive 1 NULL GeneID:613723 6 GENE PPBP NULL pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) EMBV3_14100 TCACTCCTCTCGCGGTCAGCACCCCAACATCTCACCATCTGTGTTGGTGTCAGTGATTCT Gene GeneID:616130|MGRN1:NM_001076942:279_cdna Constitutive 0 NULL GeneID:616130 25 GENE MGRN1 MGC139947 mahogunin, ring finger 1 EMBV3_40823 TCCTGTGTTTCCTCCTGCCTTCCGGCTGGGTCCTGTCACACATGGAGAACTACAAGAAGC Gene GeneID:281091|COX8A:NM_174024:449_cdna Constitutive 0 NULL GeneID:281091 29 GENE COX8A COX8 COX8L MGC133664 MGC137328 cytochrome c oxidase subunit 8A (ubiquitous) EMBV3_43304 CATCAGGGACCTATTTATCTGCACAGCAAGGCAAAAGAAGCTGGAGCAGATGACATTCTT Variant GeneID:507008|LRSAM1:NM_001075296:43_cdna 194^297 1 EMBV3_10218 GeneID:507008 11 GENE LRSAM1 MGC139439 leucine rich repeat and sterile alpha motif containing 1 EMBV3_00579 AATGCTGGGCATCTCACTGATGACCCTCTTCCTTTTTGTCGTCCTGTTGGCAATCTGCAG Gene GeneID:615968|LOC615968:XM_002689493:23_cdna Constitutive 0 NULL GeneID:615968 8 GENE LOC615968 NULL similar to Acrosome formation-associated factor EMBV3_38672 AGCTGTGTGAACCCCTTCCTCTACACGCTGCTCACCAAGAACTACCGTGACTACCGCCAA Gene GeneID:286969|UTS2R:NM_001040484:30_cdna Constitutive 0 NULL GeneID:286969 19 GENE UTS2R Gpr14 SENR urotensin 2 receptor EMBV3_25958 CCCATACCTGTGGGGCTTCCTCCAGAGCGGAACTGTTTGCTTCTTTCACATCGTAACTAG Gene BVT0102_097328 + 0 NULL GK000014.2:45946386-45995018 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056411 1 XLOC_034214 NonCoding TCONS_00056411 XLOC_034214 NonCoding NonCoding - 14:45986059-45992302 - TSS42088 6243 1 TCONS_00056411_8 124 1 0 7.19187105563748e-05 0 2.51990095666821e-05 0 0 1.71890955608519e-06 0 9.47416252500546e-07 0.00012511987091714 0.000246487438095437 9.31369934577645e-05 9.4503816865554e-05 0 0 5.23914911513453e-08 0.00170915991958555 0.00249978368422052 0.000241142679147664 0 0 1.45878367326362e-06 0.000663260538155964 0.000530488098087673 0.00115738570039527 1.10979902262548e-06 0 2.34628617974396e-05 0.000230782503785012 0.000117418890113284 0.000101119021415067 NM_001033723.2 ZNF704 Homo sapiens zinc finger protein 704 (ZNF704), mRNA. 0.0 1914 75.56 0.426557744674035 0 noncoding 0 0 0 0 -0.276385081866629 0.207125023494778 -0.0460543449967806 0.36580163375315 AGTGAAGCTCTCTTCCTCTGCTCTGATCACTCCATTGGCTTTGCTCCGGAGGGGGACTCGTGGGGGTAGAGGACTTGTGAGAGAGGCTTTGAGTAAAAGTGGAAGGACTAGGTATCTGCCTTGTTATTCTTTGTCAGTGAGTCTGACTGGATCTTTTGTGATGAATATGGCAGGCTGTCTGCTGATCAACCTGCTCTCTGAATGGTCATCCCAAACTGTTGAGACAAATGGAAACATTTCGCTGAAGGAAGAGAGGAGCCTCATCAACTCAGCCTAACATGCAAGTCCTGGTAATATTTATCCCCATGGACCTTAATTGAAGAGTGAGAAAGCAAGAGCACAGAAGCGAAAATGTTTAATCCAGGGCTTTGGGAGGCAAACATACATTAAAAACAGCATGGCCGCTGGCTCAGGCAGATTAAGGCAGAGGGGAGAGTAACATTTTGCTAGTGAATTCAAGATGGTTGCCAAAAGGGAAAAAGAGACTCCTGACTAGAATGCGGACTGTTCTTTCTCTCCCTTAAAATTCAGCTTCTTCTCCAGCTGCTGGTTTTTCCTCTTCAGTCAGAGATGTAAAGAGCGTTCAGAAGGAAATAGATGAGAAACTTTTTTTTTTGTTTTTTTTAAGAAAATTTTGTTCTTTAATGACAGTGCTCTTGCCTTTTTCAGGAGTTGCTGCTCGCTCCCCGACCAATTTTCTGAACTAAAAATTTAGAGAACTGCCCCTAGTAACTATGTAAATATAACGGTTAATCAGACTTGAGAATTAATTTTTAACACTTTCATAATATAAATAGTGGGGAGCTTTCCTTTGAAAGCTGGCAGTTAATAGTTATGTGGATGGTGCTCAATAGGAAAAGAATATTTTGAAGAAAAAAGGTTTATGGCTTAAGTGTTGAAGTCATAATCTCCACCTTCTTTCAAAATCTACAGTTGTTTATCTTTTGAATGGTAGCTTTTCTCTTGTTCCCTAGAACTTGGGTCCTTTTAAGACCTGCCACTGTTTGGGCATTGGGGTTAACCATTGCAAAATGGGCTTCTTTTCCACCAGAATAGGAAAGCTCACAATTTACTCCTCCAGTACTATATTGCTTGAGAAACATAATAAAAGTATAATTTATCAAAAAGCAGGTTATGGGCCAAAATGGTTTAGGCCCATCTAGCTCCATGACTAAACTTGTGAGTGGCTTTACTCAAAACCTGTGAAACCTGTAAGCTGATGAGAGAAGAGGACAATCCATTCATGGACTGGTCAACCTGTCAATCATACGATGACAGAAATATCAGGCATTGTCAATGTTATTTAAGTTGCATTCATATTTACCATGTGACATAACCATATTACCAGCTATTTCCGACTTTGAGATGACAGTATTTTTCAATTTGATCCTTACAAACTGAATTTGAGCTTATTTTCAAATTTGGGGGCATCAATACAAGTTTACATGGATAACAAAAGCTGAATGTTAGCAGCAAAATAACTTTTTTCAAAGGAGTCAAAAGTTTAACTCGGAACATTGCACTAGCTAGTCATCTCCTATAATTAACCACTTAAATGGCTGGAATTTAGGGGATGGGGGCCTGGCAGGTAGGCTAAAGGGATAAATTTCAGAGTGAGTCTGCATTTGATACTGTGATGAGGGTTCTTTACTTTTATGCTGAAATACTTGGATTGTAAGTATGGGTAAAGAACATGGGTCCCTGGGGTCTTCTCAGGTCTAGAGTCATTCTGGAAGACTGAGGTCTAAGCCAGCTCTTTCACTTGCTCTTTCCCTCCTCCCTGGACATAGTAATGAGGCTGACTCAGGTTCAAGACCACTTGCACCAGGTTTGGCTTTGGAGGTGGTGGTAGTAATTTTAAATATTCTCATTTTATGCTAAGTACTAGGGAGGGTCAAAGGAAGTCATGTATCTGAAAGAGACACACTTTCTTATATATCTGAAAGGGTTAGTGATTATCCTAATACCATCAGGACTCTGGGGTAAGACACACTCTAAAATTACCTAGTTTATCCAAATGAAGGAAGCAACTTCTAATTTTTTCCATGACACATTTATTCCTATTTTGTCTTTGCCCTCAGGGAAAGATGTTAAGGTTTTCTACATGGAAAAACTCCATTTTGAGGTTAGTGGACACTCTAAAATACCTAAGTACCTACCAGTTATGAAGCAAGAATTTTGCCGTGTCAGAGGTGGAACAACAGAGCTTTTATCCTGGGATGAAAACTCACAAGGCAGGATGGAGTGGGAAGGGATGTGGAGGGGTTGGCAAAGGGCTTTGGCACGAGGAGGCAACGTGTGCTATCTGAAACTGCAGGGGCTCCTGGCTGCCTTCGCTGAAGGCACAAGGCTGCTCTTTGCCAGCCCCTCATCACAGTGGTCACGGCAGTGAAAACAGTAAGGAAGTGAGGATTACAGTCATTCAATGCTTTGGGGCCCGGCCTGGGCATGCCACGAGGCAGAGTGAGAGCTGAATAATACTTCGGTATATTTTGATCAGAGGCAAGGCTAGTTTAAGGATGTTGTATTTTTATACTCAAATCTTCCATGAGAGTGATTTTTGGGGAGAACTGACTTCTCTCCCTTTAATTTTAGTTGCCCAGATAGTGCCAATTTGTGAGTTGGGGGCGCTGCTTGAAGAACTTGACTTGATGGCTATGGAAGGTGAAATCTGCTTTTTCCCAACAGTTGAAACCAGTGCCCAAAGGCTGCGTCTGTCCATATACAGGTTCTCTTTGGTCTGCACACTGCTGGCCAAGAATTTGAGTTTTGATTAAGTGTCAGGTAACATCATATTTCCAAGTCAGAAGGTCTAGCGCCCCAGGCCTGATTTCTGCATGGTTCTGATTGTCTACAGCTGGGGTCCCCCTTCAATGGGGACGCATGTCCTCTGGTTCACTGTGATCTCTGTCATTCTCTAGTGTCCTTCCTTTGCCTGATTTGAATCATTCGTTTACACAATTTGCCTGTTCTTTCTAAGCATCTGCTATGTACCATTAGGAGGCTTCTATTTAAATACGAAGCAAGACTCATTTGATCAAAAACCATGCAGCAATGAACACTTCTTGGGAAACTGTAATGCCAACATTAGAGATTTTCCAAGAGAATGAAGAGAGGCATTGGACTGCCTCATCTCAGAGATGAAGCTGTACATGTCTTCCCCTAAGCCCGTGCATTTCTAGTCCTCATGTGTGCAGATTCTGAAGCCTGTTTGAAAGCAGAGTCTGAGTGGCCCTTTGACCACCTCACAGGGGTTGCCTAATGGGTAAGACTGCTCTGTCCTAGCTTTTCTTTTGATGTTATCTGCATACTTGACTAATTAGTCTAGCTTTTGAATTACTAAAATCTTAGAAAGAAAAGATGTTTTCTTGCTTAACAGTGAGTGGGCTAGAAAAAACTAATGCATTATGAAATGGTTTTGGCAAAGCTCAGAATTATTTGTGTGGTTAATCAACTCTCCATGGTAGCCTTCCTTGTTCCCTGACTCTTGGGAATATAGTGACTTTCTGATCTCAAACTTGCCTGTCTGTGAACTTCTCATGTGAAAAATCAAGCACTTGTTCTGATAAGGAAATGAAAGTTGTTTAGTTAGTGGAGAGCACAAAATTATTTTAAACAACACCAATCAGCTAAGAATTGTATCTTTGGGCTTATACACTATGATTTTAGAAATTACCATCAAATGACACTTGCTAGTAAAATGCAGCTTTGTGGTTCTGGTAGGCTGAGCACTAAGCTTGTCCTTGTGACAGAAATCTATCACAGTTCATGACAGAATTTACAAGTTTATTTCTCTCATTGCCTATAAGCATATCTATTAATATTTTAAAGATTTCAGATATACGATTCTTAAAATGTTTTCTTTTCCCCAAATATTTTGAAAAAACACTGGTAAAGATAATAGGAGTAGCTGTTGTAATAATCTTTCCATCTGATCTGCATTTCTACTCTTGCTGCAGAGGGTTGATTGAAAAGATATGCATCAAAATGCTTGCTTAAAAGAGGCATAGCCCTTTGTTTGGAGAGCAGGAATTGCTTATAATATTAACACTTTCTGTTTGGTAAAATATTGTATTTTAAAAAATAAGCTACAATGTATAAAACGAAGGTCATTTCCCACAAAATGTTCATGTTCTTTATGATTACAAAACGCTGCATCTTGTAAAATATTTCCAGTTCTGTTAACTTGAGAAGTTAAGTACTAATGCTTATTATAAAAATGTCACATCTTTCAGAAATTGTAGAAGCCTACGCAGTGTTTTTCTTGCCTTATTTGGAAAATTAAGTTATAATTATTATTGTATTTAAGATCACATTTTGACACAACACATTACCATTGTGATTCTCAGACTCACAAGAAAAGTTATAAAACATGAGATTGTCTTCAATTAAAAAAAAAGGAACTATTTACAAAACAGGACCAGAAGTAAAATTCCCCTTTTGATTTCTAGTCCTATGATAGATACACCTTTTAAAGCACATATGTCATTGGATCTGGGCTTTTACAGTTAGTCATGGTAAGCAAACCAGTCGGTCTTAAATACATTTTATACTTTCTTGCTCTACTGGTATGCATTACTTAGTGATACAATTGGTACCTAAAAGTGCTTATAAGCTCATTTCATTTACCGATTTCCGGGTTTGACTAGTTACGATGTGAAAGAAGCAAACAGTTCCGCTCTGGAGGAAGCCCCACAGGTATGGGGAACAGGGAGAGCAGTGTGTGCTGCTGGCTGGGTTATTTTCTAAGAGAAACGAAAATTCCAGTTGACCCGTGTGCCCAGCACTTTCTCCAAAATGATCCGCATCCTCATCCATATTCATGAATCCTGCTCTTGTTTCCACTCATTTGTATGCACAAATTCTCCCCTGCGTTCATATAGATCAGAGCTACAGTTGATGTGGTCAATAGAAATTCTACAGGGTCATGAGAAAAAGCAGCACCTTGTCCACAAAAGTCCATGGAAGTTTGCTCCTTAACCTGTCATTAAAGCAAAATGCACAACTTTCACATCCCTCCCCTACAGAATTCTTGCGTACAGCTAATAATCAGTTCTCCAACCAGCTGATTATAAAAAGGAACACCAAGGCGTCATATTCATAATTACATTCAGAAACAGCCTTATATGAGTCTGTGAAAACCCACCAGGGACTGCGCTGTGGTTCAGACATCAGCCTTAGAATGCAGGTCTAAGAAACAAAGAAACTGCTCTGTTTCATAGAGCGTTCCTTCACACCTCAAAAAGTTAGTACTGTCTAGCTCATGGAAATTGGTCATGAAATGGTATGTTCATTAAAAAACAAACAAATTATTCTGACCAGAAAAGATGCTGGAGATAATAGAAAACCTTTCTAGTCTTAAAATTCTCCAGATCTACATTTCACATACCCTTTAGTTTTCCCTGAGGAAATGAAATTTTTTTTTTTTTTTACAGTATTTTGCTACTATTCTCAAGGTATTCTCTCCCATATGTACAGTGTGTGCCAGTTTCCCCTAAATTTTCCCAAATGAGTGCTGCGTTTTCCTTTTCCAATGAAGTCAGATGGAGGTGGACATGGGTTGAGCAGTCCTGGCTAATTCAGAACTGCTTTTGAGTGTGGCTTAGTGTGACACCAGCAACACTGGACTTCAAGTGATCTTGAAATTTGATAGAGGGCATGTTAATTTCAGACACTTTTTACAACATACATGTAACTTTGTAAAAAAAACTTTGTTGGAAAGTCCAAAAACTGTAACGTGCCTCTTTCTCTATTGAAAAGTTTTCATCTGCAACAAGGTTATGACTGGACAAAGACTCCTCTCACCAAGGGCACCCATCCTGTTGGGGCATGGAGTTGCTGACAGGCACGCACATTCCTGCTCAGAAACCCACTGCCCTCTTCCTGACACTGGCTTTCGCCAAACAACGGAGGGGACTTTTTAGCAAGTGAGGAGGAGAGTAGTATGTGCCCACTGGGGATGCGCACGGGGCATGCTGCATCCCTGCCCTGCGTGCTTCCCATGAAGGAGCTGTCTCTTGGCGTTAAGCAGCGGCTCCTTGAATGGGAACACGGCAGCTCCCTCGGAGATGCCCAGGGACAGTCACCACCAGCTGATCATCGCTAGGATGGTGAACCCCAGTCAGGTGTCCACAGCCCCCCTGTATCCTCTCTCTGGCTTCCCACCCACTTGCTCCCGGATGTTTCCTCCAGGTGGTCACACTGCCTTCCACTCATTGGTTGCACATCCTCTGAGAAGAACTG TCONS_00053438 . 3' 2717 TCONS_00053438 . 3' 8959 EMBV3_02380 CTTATGAGTGCCTTGGACAGTATGGAGATCATGCTGCCTTGTAGGACTAAAGTATAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08613 AACTGCCCGACGGCATTGAAACCAAAGATTTGTCGGCGATCCTCTGTCACGATGGAATTC Gene GeneID:616007|HSPB3:NM_001046570:4_cdna Constitutive 0 NULL GeneID:616007 20 GENE HSPB3 MGC137492 heat shock 27kDa protein 3 EMBV3_22210 AGATCTGAGGGACAAGGACAAGGCAAAGCCATGGGCCAAAAAGTTGCTGTGCTCCCACCA Gene GeneID:282705|PSEN1:NM_174721:32_cdna Constitutive 0 NULL GeneID:282705 10 GENE PSEN1 NULL presenilin 1 EMBV3_10887 TTTGTCTGTCCTCGTCCTTGTGGTGGTCCTGGCATGGTGACGCTCTGCTTTGCATTATCT Gene BVV0102_050405 + 0 NULL GK000002.2:136445053-136457513 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104262 TCONS_00104263 TCONS_00104261 TCONS_00104258 1 XLOC_062334 Coding TCONS_00104262 XLOC_062334 Coding Coding LOC100848477 2:136362235-136447737 = TSS77248 6020 1 TCONS_00104262_4 717 10 0.929708424462872 0.00322422514273882 8.90383804738059e-08 0.000160893890408556 0.00145234835925254 4.71513652199475e-08 0.000473185418978166 0.000226096026731108 9.3051891466382e-09 1.15731176713421e-08 6.01006283588406e-05 3.33368881430311e-05 2.65262244885732e-07 0.000105347915324707 0.000375307837135182 0.000343026951876853 5.13043494831536e-05 0.000148808516265968 0.000165851964281768 0.00131435933153513 0.00077209947663201 0.00131258874210995 2.24425633896357e-09 5.44728545074336e-07 0.000185223325823014 0.00241838623941595 0.00139222831680344 0.00114577204464318 6.13924136047584e-09 7.29915648654575e-15 4.86071539251996e-09 XM_003585804.2 FBXO42 PREDICTED: Bos taurus F-box protein 42 (FBXO42), transcript variant 0.0 1.083e+04 100.00 0.997508305647841 NM_018994.1 FBXO42 Homo sapiens F-box protein 42 (FBXO42), mRNA. 0.0 3341 85.37 0.489036544850498 TCONS_00104262_4 sp|Q6P3S6|FBX42_HUMAN FBX42_HUMAN F-box only protein 42; 0.0 1358 95.12 0.99860529986053 8 coding 1 1 1 1 -0.00529110749960462 0.96549052294233 -0.0601809583941639 0.247838727783252 CCGCGCTGTCTTCTCAGCCAGAGCGGCGGCGGCGTTTGAGTGGAGGAAGATGGCGGCTCCGGGCTGCTCGGTGTCCCGCCAGCTGTGAGGAGTCCCGAGTGCGGCGGGCGCGGCCTGCGGCGCAGCGCGTCTGCTCGCGTCCTGACCCGGGTTCCCTCACCGCCTTCGCCAGCGGAGCGTACCCGAGAACGTGGCGCGGGCTAGGCCAGGTGTCAAGTGGGATGTCATGGCCAGCTCCTCAGACAGCGAAGATGACAGTTTCATGGCTGTGGACCAAGAGGAGACCGTGCTGGAAGGGACAATGGAGCAAGACGAGGAGCCCCGCGCGGCGCTGGAGGTTGTGGAGATGCAACATAACAGGTCCATGTCTGAGCTGCCAGAAGAGGTTTTGGAGTATATCCTGTCCTTCCTCTCCCCGTACCAGGAGCACAAAACTGCAGCCCTCGTTTGCAAGCAGTGGTATCGACTGATTAAAGGTGTCGCCCACCAGTGTTACCATGGTTTCATAAAGGCTGTTCAGGAAGGAAACATCCAGTGGGAGAGTCGGACTTACCCTTATCCCGGGACCCCCATCACCCAGCGGTTCTCACACAGTGCGTGCTATTACGACGCTAATCAGTCTATGTATGTGTTTGGAGGCTGTACCCAGAGCAGTTGCAACGCTGCCTTCAATGACCTCTGGAGACTTGACCTAAATAGCAAAGAGTGGATCCGACCTTTGGCTTCAGGGTCCTACCCGTCCCCCAAAGCTGGAGCGACCCTGGTCGTATACAAGGACCTGCTCGTGCTGTTTGGCGGCTGGACACGGCCGAGCCCTTACCCCCTACACCAACCAGAGAGGTTCTTTGACGAGATACACACTTACTCACCCTCTAAAAACTGGTGGAACTGCATTGTGACCACCCACGGCCCACCTCCCATGGCCGGGCACTCCTCTTGTGTGATAGACGATAAAATGATCGTCTTCGGCGGCTCCCTAGGATCGAGGCAGATGAGCAGTGACGTCTGGGTGCTAGACCTCGAGCAGTGGGCATGGTCCAAGCCCAGCATCTCCGGGCCCAGTCCTCATCCCCGAGGCGGCCAGTCTCAGATCGTCATAGATGATGCAACTATTTTAATCCTTGGAGGGTGTGGCGGTCCCAACGCTCTGTTCAAGGATGCTTGGTTGCTGCACATGCACTCAGGTCCCTGGGCCTGGCAGCCGCTCAAGGTGGAGAATGAAGACCACGGGGCCCCAGAATTGTGGTGCCATCCAGCTTGCCGGGTCGGGCAGTGTGTGGTGGTCTTCAGCCAGGCGCCTAGTGGGCGAGCACCGCTTAGCCCCAGCCTGAACTCCCGCCCATCACCCATCAGTGCCACCCCTCCAGCCCTGGTTCCTGAAACCCGAGAGTACCGCTCACAGTCTCCCGTGAGGAGTATGGATGAAGCACCCTGTGTTAACGGCCGCTGGGGAACCCTGAGGCCCAGAGCGCAAAGGCAGACCCCCTCCGGTTCCCGAGAAGGAAGCCTTTCCCCAGCCAGGGGCGATGGCTCGCCTGTCCTGAACGGTGGGAGTTTATCTCCGGGATCGGCAGCTGTAAGTGGCTCTTCCTTGGACAGCCCTGTGCAGGCTGTGTCTCCAAGCACCCCGTCCACCACTGAAGGGTATGACCTGAAAATGGGGCTCTCCCTGGCCCCTCGACGAGGATCACTCCCCGATCAGAAAGATCTAAGGTTAGGGTCAATAGATCTGAATTGGGACCTGAAAGCTGCTTCCAGTGGCAATCACGTGGATGGCGTGGGCAGCAGGACAGCGGGGGGCAGCTTGCGACACCCTCCCGAGCAGACGAACGGTGTGCACACCCCGCCGCACGTGGCCAGCGCCCTCGCGGGAGCCGTTTCCCCGGGCGCCCTGCGCCGCAGCCTGGAAGCCATCAAAGCGATGTCGTCCAAAGGTCCCCCCGCCTCCGCAGCACTGAGCCCTCCCCTGGGGTCTTCTCCAGGCTCCCCCGGGAGCCAGAACCTGGGCAGCGGAGAAGCAGTGCCCGTCCCCCGCCCCGGGCCCGCGCAGGGAGATGGACACGCCCTGCCCCCCATCGCCCGCCGCCTGGGCCACCACCCTCCACAGTCCCTGAACGTGGGCAAGCCCTTGTACCAGAGCATGAACTGCAAGCCCATGCAGATGTACGTGCTGGACATCAAGGACACCAAGGAGAAGGGGCGCGTCAAGTGGAAAGTGTTTAATAGCAGCTCTGTGGTTGGGCCTCCCGAGACCAGCCTGCACACCGTGGTACGAGGCAGGGGCGAGCTCATCATATTTGGAGGACTCATGGACAAGAAACAGAATGTGAAGTACTATCCAAAAACAAACGCCTTGTACTTTGTGCGAGCAAAGAGATAATATGTTCTAAAACCTTTCCCCTTTCTGTGGCTTTTAATTTGGAATTTTCCAGCGTGCAAGCATTTGGACTGAGAACTGAGGAAACAAAGGACAAAATTACTCTCATAAACCAAACCCCAGTTCCCAGCCTCACTCACTCCAGGCTGGGATCAGATATCCATTAAGACAAAAAAATTATATAAATCTATAAAGAAATATTATATAGCCAACTCTGTTCACAAAGAGAGAGAGAGCTCCATCCTGGTTCAGATAAAATTGTTGCTGTGTTTTAGCAGAGGCTCTGCCTCCTTTTTCTACTTTACTGGTAACTAGACCAAGAATTTAGGGAACAGATTAATACCAGAACCTTCCTACAGAAACTGAAGAGCCACCTATAAATCTTATTTGGCCTTCTCAGAGTTAGATAAAGAAAGGGCACGCATAAAATGTACAAGCAGAGGTTTCCGATCACAGGCTGTCGGTGCTGGCAGGTACAGTGACGTGTAGCAGTCTGCTCTCCGCCCGCAGAGGACCTGTGACCGCTGCTCTCTGCAGTGATGCCCTCTGCCCAGCCCTCTTCTGCCCGTTGGGACTGAGGAAATTCCCCAGTGGGATCCGCTGCACGTGCGCCAGGGTCATCGTGAAACAGCGTTCACGCAGCAGCGCCTGTTTGCTGCTCCCTCCATGTCTTAGAGAACACTCTGGGGTCTGATTGTGGAGTTTTCTAATAGTCATATTTCATCGCAGTTTCCAAAATCTGTATTTGTTCTCTTTTTCTTCCCCTTAAAACCTGGCGCTCAGAGGCCGCCTTTTCTGTTTACAGCTGCTGTTCTCCCCTCCTCCCTCCCCCACCCTCTTTTTCTTTGATATGTGAAATTTTTTAAGCCCTAAAACCTTTGACACTTTCTTTTACTAGGTTTGGGTGTCCAGAGAAATCTCTTAGAAATATTTCTGGAACCCTTTTTCTCGAGTCACTAGGGGACCAGCAGGGAGTTCTGAGATACCAATACCATGAGAAATCCTTGATGCGTCAGAAAGTACTGTGGGCTTCTTTTTATTTCCAAAGCACATTGGACACACCCATCCATGTTTATAGACTTGATCTTGGAAGAGCAGTTCCTTCCAGAAGGGTTTTCGCCCTCGCTTGTGGCATGCATTCTTCTGCCTGGCTGTGGACTGGTGCTTGGGTTCTCTGAAGCATGGCTGACCTCAGGGCAGCTCTTTCTTTGTCTTGCTCACCTGTCGCCCAAACAAGGCTTGGGTTTTCACTTTCATGTCATTTCTGAGATAACATTTCCAACCAGAGCAGTGCTGGTGGGGTGGGGGGCGGGGGGTTGCCAGTCTCTAAACCATGACCCGGAGAAACATGCGTCATTCTGGAGGTTTCTCATCAGGAGAAGAGGGTTATTTTGCCTGCAGGCTTTGAATTCGTTTCTCAGCCCCGCTCTCCCCAATTTCTTGTCGGCCTTTCCCAAGCCGAAGCGTGCTGCAGCTGGCCCTGGGTCCTGGCGCCAAGCCAGCTCTCAGCAGCCTGTCTGATAAGTGTGCTTTCTCCTGTTACATCATGTTAAATCCTTTCCCCTAGCCTTTAGCTTTTACAATGTGGTCTTGGTGGGAAAGCGCCCTTGGTGCCAAGCCCGGGAAAGGGCCAGCTCACGGGGAGGGGTGCCTCTGCGTGCTCCCTAGGGTGAGGAAACTGCCATGCGCCTGCTGACCATGGTGTCCAGCTGCTCACAGCTCAGCACTTAGCTTCCCAGACTCTCTACCCTGGGCCTGTTGCCAGGCCTTCTTTGGCAAAGACCGTTAGATCGTGCGGGGTTCCTTATTCACAAGAGAAGGCTAGCCTAGAAGATTAGCAATTTCAGCGTTGCTGCTGCTGCTGAACCTTGTTTATGACACTGCATCTGTGCATGGACAGTGCCTCCAAACTCACTGAGTTCCTACTTAAATATAAAGTATTTGGAAGCCTGAAAGTTCTGAGTCTCAACTTGGTGATCTTTCCCTCTGTCCCGGGGCCTTCCTAAGCCGCTGTTAACCTGTTGATTCCTTCCACTGTCCCCAAGTAGGCAGGCAGCAGAGCTGATGATCCTCGTAGAAAGGAGCCTGGCTCCTTGGGACTGCGTGGCATCCCAGGATCACCCACACCGCTCGGAACCAGACTGCTTACAACTCCTTTAAGAAAGCTCTGCCTCTGCCGCCCCCGCGGCGTTGGTCCCGCTGGCTCTTGGGCACTGTGGGCGTGCGTCCGGGGAGAGCGAGGCGGCACAGCCCAGGTGGCCGCCTCCTGGGTGCGGGGGGGCTCCGGGCGTCCCGGCTGAGGGGGCCGTTTCCGCGCTGCCGCGGACGCTTCAGTCAGATCCGGCTGAACCACCGCTCCGCTTTTGACACGATGCCAATTTTGTCTTAAGATTCACTGAGGAAACTGAGACGGAATATTTTTTTAAACCCTCAGGAGCACCTAAAGTAAATATTTATCAGTATTTAAGTATTTAAGATACATTTTGTCTCTACTTGAAGCTTTAACCCCTTCCGTTCCTGCAAGTGTGCCTTGGCAGCCCCCCACCGTCACGTTGACGTCACCGGCCACCACGCTGACTTCGTGAGAGGTTTAGTCTCTTCCTTTCCTTCTGAACAGAGCTCCCTGTTTGCTCATTTTGCAGGCTGCGCAGCAGAGAGGGCTCACATTTTCGCTCATACTTCTGCCCTGCTTCTGTGTTTTGGTGGTGGGTTCCAAAAACCACCCCCTCCCCACTGCACCCACCCCACTCTTTTGGGAGCACAAATTTGATGTCAGAACAAGCTTAACTTTCAGTTGTAAAGCAATCCTGGGTTTCCTTTCCTCCCAGCCCTCTACAGATTGATTTGGTTTTAACGCTTGAGTTTAATATCAAGAGCTGAAACCATGAACTACCCTAGGAACCATGCTGAAACTCTTTAAAAGAAGAAGAGGAAGAAGGAAGAAAAGCAACTCTTAAGTCTGGGCTTCAGAGGACAGAAAGCCTCCAACTAATGGAGAACAAGGGGATGCTTTCCTTCCATTTCACTTGATCTTTCTGGGTTTCCTTCTGCATCGCTTCTTTCCTTCCCCTTGAGAGTGACGTTCCTGGTTGGTTGGTTGGTTTGTCTGTCCTCGTCCTTGTGGTGGTCCTGGCATGGTGACGCTCTGCTTTGCATTATCTGTGGTCTCTTACCAGCGCACACGTCAGTGGGGGGGGATCTGAACACACCCAGGGGCAAGGCAGCCGGACTTGCAGGCCCGCACCCCAGGCAGCCTCCCCATGAGCTGCAGAAGGCATGTTCTGCACGGTCACCAGTAAGCGGTGGCTCCCTCCACCGTGTTCGTTGTCAGAGGAAAGCGCCCCTTAGGCGCTGGCGCCGCTGTGCTGTCTGCTCGCTCTCTCCCCTCCCACAACCAGGGTTCCCATCAGCGCATGCGTGCTGTGCCCTGATGAAGCTGGTGCTGAGTGACGTTTCCCACGTGACTCAGGGGTCCTGGGTGGCTTATGCTGAGATGATCACTGTAGGCACATAACAGTGTAGGAATGAAAAGTGGATTTGATTTCATTGATATTTAAATCTCGTCGATTTTATTTTTTGTTAATGTTTTCCCCCGATGACTTTTTAGCGATTTAACAAATAAAACAAAATGGACCGAATTGTC EMBV3_15337 CTCACTGTTACCAATGTGACACAGGAGCACTTCGGCAACTATACTTGTGTGGCTGTCAAC Gene GeneID:781106|NEGR1:XM_002686317:80_cdna UTR3_Alt 2 NULL GeneID:781106 3 GENE NEGR1 MGC157347 neuronal growth regulator 1 EMBV3_37619 CCAATGGAAAGCCTGGTGACCCCAAGTCAGACAAATCTGACCGCCCCGTCTGCCGACACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33452 CAGAAAGAACCTATGATAGGAGTGAATCAGAAGAGTCAAGTGAATTCTGAGGGACTCCAC Variant GeneID:282208|CSN1S1:NM_181029:14_cdna 566^744 5 EMBV3_40618 GeneID:282208 6 GENE CSN1S1 CSN1 MGC133694 casein alpha s1 EMBV3_00981 AACTTCCTGATCATCCTCTTTGAGCCTTGGGTGAAGTTCTGGAGGAGTGGTGCCCAGATG Gene GeneID:524975|XKRX:XM_002699816:43_cdna Constitutive 0 NULL GeneID:524975 X GENE XKRX NULL XK, Kell blood group complex subunit-related, X-linked EMBV3_24034 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30352 CAAAGAGTCAGACATGACTGAGTAGCTGTGCACACAGAAGATCATGTGAGCTCTGTGGTG Gene BVV0102_318668 - 1 EMBV3_38313 GK000020.2:42415420-42936164 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29332 GGGACCCTCCACAGGATCTTCGGACATAGGTTGGAGATAAAGGACTTTTCAGGTGCAGAA Gene BVT0102_128563 + 0 NULL GK000007.2:42948393-43010002 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216717 TCONS_00216718 1 XLOC_131308 Coding TCONS_00216717 XLOC_131308 Coding Coding - 7:42980633-42987347 - TSS161564 4093 2 TCONS_00216717_1 220 0.664793549963352 4 0.390883360643527 0 0 0 4.88262491303057e-08 0 2.39614978335182e-08 0 3.0440998276914e-08 9.14622519308611e-05 0.000275689795262129 4.09754369919187e-05 0.000234196214109536 0.00259014848779855 0.00343051549892498 0.00237839390165175 0.00016101516579364 0 3.06507952065601e-05 0 0 0 5.54178364042596e-10 9.65498401826604e-05 0.000210314558764485 3.79448207142164e-08 3.81944052564077e-08 0 2.68564578803965e-05 2.49738632690858e-08 3.1965918764133e-08 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1317 92.19 0.221353530417786 0 coding 0 0 0 0 0.023282732181501 0.821885912252515 0.0854920002085695 0.130282763795256 GCTTCAGAGACTGCTAGAACCAGACATATTTCAGGAAATCACCTGATCTTGTGAATTCCAGCAAGGTAGAGTAAGTGCCAGCTCTCTTCAGTTCCTGGATTAGAAATTGTGGCTACAGAGGAATTTCAGAATACCAATGGAGAAAGTCACAATTCAGACCGAAATTACTAGCCACCTCCAGGATGTAGAGACAGTAAAAGAAACTCAGGGAGCAGAAGTGCCCTCAGACCAGGGTGTCAAAGCTTGGAGCGACCATGAAATCAGGAGTTTCTTAGAAGAATGGGAACTCCTTGAAGGTGAAGCATTAAAGAAGGATTTTCATGTAGCATCAAAAATAATTGCCAAGCATCTCAAGCAAAGGGGCATAATTAAGAGCAAGAGAAAATGTCTCCAGATGCTCATAAACATGCACGACTTATATTGGACCATTCATGAAGTCAACCAGAAACCAAGAAGTGAACCTTTGCCATGTCCTTATGGAGGGACCCTCCACAGGATCTTCGGACATAGGTTGGAGATAAAGGACTTTTCAGGTGCAGAAGTGGTTGCCCTCCCACCACCTGTGTACCAGCATCCTGCCTGTGCCATCCCTGATCACTTTGAGGAGCTGTCGTGGACTCCCCCACAAATGATCTACATAGAAGATCCCCATGTACCCAGTTGGGAGCCCTGGAACATGAACCTTCCACAGTCAAGTCCATGCCTGTTTCCTGCATTTCTCCTACCATACCCTGCCCCTCAGTCACCATGGTGTCCTACCACACCCTGGTCTTCAGCAACAGGGGTCAACTTTTTCTGACAGAATCAGATGGAGGACTTAAAATTAGAAGTTCACAGTTTGATTCAAAGTATAGACAATAGAGTAGCACAATTCTCTAACCTCATGACTTCTTTCTTCCTAGCCCAAAGTAATGAGGGAAAAAAAAAAAAAAACTATAAAAATATATGGCTGTTACTCTCACCCCTTTCTGACTTGTGCTGGATTTTGGATGGGACCTAGGATTGTAAAATGTCCTAGGGGCTGGAGGGGTTGGGCTTCACTTTACAGGTAACTTGAGACTTGTTACCCTTTCTCTTTACTCTCTCCATCTTGCTACTTGCATGGAGGATCATTAACATCGGGGACAACTTAGACATTCAGAGATAACTGTGCTCAGTCACACCTTCTTCATTTCCTGAGTGTGACTGTGGAAATTGTTTAATGTTTCTGATAATTATATGCTTATTTTTTAAAAGAAATTGCCCATTCAGTTTTCAGATAGCTGTATCATTGTATGTTACCACCGGGAAGGTCTGAATCATTCAGTTTGTTTCCTCATTATTATTTTGTGTTGTCACAATTTAAATTTTTGCAGTTCTGACAGTTCTTCAGTAAGTGGCATCAGCAGACTCGGCCCATTTTAGCATGCTCTGAGCAGAGCTTAGAGTGATGGTCCAGCCTCTTCCCATAGGCTTCTCTGTTTATCACGCCAAAGTGGTGATATCTCATTGTGGTCTCAATTTGCAATCCTTCTTGACTAATGACTGAACATCATTTCGTGTGTCTATATGCCATCTGTATATCATCTTCAGTGATTAGTCTCTTCAAGTTTTTGGTCCATTTTCTAATTGAATTGTTTTTTCTCTTATGAATTGAGAGGTATTTATTGTAACCTTCTGTGAGATGTGTCATGTGTAAATGATTTCTCTTTGTGCTTTTTTTTTTTTCTACAAAACCTCATATGGACAGGATAAAAGTTAAATTTTGATTAGGTAAATTTTAAATAGTACTTTCAGTTTCTTTGATAGGAGTATTCAAATTATCTCCTCCATATTAGGTAACTTTCAGTAGTCTGTGTGTTTTAAGAATTAGTCCATTTCTTCTAAGTTGTCAAATTTTAAGTGTATACAGTCACTCACAGTATGTCCTTGTTTTCTTTTGAATTACCTAGGAGTTTGTCAAGGCTATATATTGTCACCCTGTTTATTTAACTTGTATGCAGAGTACATCATGAGAAACGTTGGACTGGAAGAAACACAAGCTGGAATCAAGATTGCTGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTCAAAAGCCTCTTGATGAAAATGAAAGTGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAATGAAGATCATGGCATCCGGTCCCACCACTTCACGGGAAATAGATGGGGAAACAGTGGAAACTGTCAGACTTAATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAACACGCTTACTCCTTGGAAGGAAAGTTGTGACCAACCTAGATAGTATATTCAAAAGCAGAGACATTACTTTGCCAACAAATGTTCGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAGGCTGAGCGCCAAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGATTGCAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACCTTGGCCACCTCATGCTAAGAGTTGACTCACTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGAATGACAGAGGATGAGATGGCTGGATGGCATCGCTGACTCGATGGACCTGAGTCTCAGTGAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGCATGCTGCAATTCATGGGGTCACAAAGAGTTGGACACGACTGAGCGACTGATCTGATCTGATCTGAGGACCTCTAGTGATGTCCTTTGTTTCATTTCTGCTATTGATAATTTGCAGTGTCCCTTTTTTCTTAGTCTTGCTCTAGGTTTGTCTATTTAATAATTTCAAAGAATCATTTATTAGTTTCATTGACTTTTCTTCATTCCGTTTGCAAGTTTATTACTGATCCTATCATTATTTCCTTCCTTCTGGATCTTTTGGGTTTAGTTTGCTATTTTTATTCTAGGTTCTTCAAGTGCTGGATTAGATTATTTTTCAAAGACTTTTTCTTATTTTATGAATAAAATTAGTGCCAGAAATTTTATTTCAGCCACTGCTTTTGCAGTGTCCCATGGATTTTAATGTTACATTTTATTTTATTTTATTTCAATATATTGTTTTTCTCTTTAGACTGTTCTTTGACCCATGGATTATGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATAAAATTTTCTAAGATTTGGAGATATTTGTGTTGCCATTGTTTCATTGGTTTTCTAGTTTGATTCCACTAAGACCAGAAAACACACTACATATGATTCAGGTTTTAAAATTTGTTGATGCTTGTTTTATGGCCCAAAAGATGGTCTGTCTGGTGGCACCTGAAAAGCATATCCTAATGTCAAATGAAGTATCTCATTACTGTTGATAAAGATTCTTTTTGTTTGAAAAGTTTGTGGAGTTTATTTACTTGTTTATTTATTTACTATTTACTTGCAGATTTTCTGTTTAATTATTCTGTTTTGTATTATTGAGAGGGATTTGAAGTGTTCATCTACAATTTTTTGTCTGCTTCTACTTTGTATTTCTACAAGTGTTTGGCTTCACATATTTTACAGCTCTGTTCCTTGGTACATACACTTTTAGGATTGCTATTCCTTCTTATTGGATTAACTTATTTTAATTATGTAATTTTCCTGTATATCCAAATATTTACTTGTTTTTAAGTCTACCTTATCTGATATTAGTTTGTCCACTCTTGCATTCTTGAATTAATGTTTTGCATCTTTTCCCATGCTTATACTATCAATCTACTTATTACATTTGAAGTTAGTTTCTGGTAGGTAGCATATATAGGATCACAATTTTAAGTTCATTATATCAAACTCTCTTTAAGTGATTTGCTTAAACCATTTACATTTAATGTAATTATTTTTAGAACTAATGCCTCACATTTTATTTTTCACTTGTTCTATTTTTTGTCTCTATTTTCTTTTTACTGCCTTCCTCTGGGCTACT TCONS_00216716 s 5' 32242 TCONS_00216716 s 5' 35801 EMBV3_25288 GCCATCTCTTCTATTCATAGTACACGTCACAGTATTGATGTGATTCAAAGTGTTTCAGTG Gene GeneID:534620|TAOK3:XM_002694504:393_cdna Constitutive 2 NULL GeneID:534620 17 GENE TAOK3 NULL TAO kinase 3 EMBV3_19681 GATCCGGAAGAAGATTGAGCATGATGTGGTGATGAAAGCCAGCACCAGCCTGCCCAAAAA Gene GeneID:616568|LOC616568:XM_002693053:343_cdna Constitutive 0 NULL GeneID:616568 15 GENE LOC616568 NULL similar to Leydig cell tumor 10 kDa protein homolog EMBV3_09713 GCTTCTGTGTCCCAGTTCATCTTAACTAAGGCGGGACATGAAAGCTTTTGGTGTGCATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01807 TGGTGGGGGTGGCATGGGCAGGAGGCTTTCTTCATGCAATCATTCAGATCCTCTTCATCT Gene GeneID:617614|LOC617614:XM_002693571:257_cdna Constitutive 0 NULL GeneID:617614 15 GENE LOC617614 NULL similar to Olfactory receptor 4C46 EMBV3_21318 TGCAGATCCAGATGGGTGAGGTCTGTGCGTTTCTTCTAAGGCCGAACCTTGATGGGGTCC Gene BVT0102_038847 - 0 NULL GK000007.2:12469003-12582839 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19982 AGTGGCTCAAGGAAGGAGAATATGTGACGGTGGGCACCAACAAGACGGGCATCGTGAGAT Gene GeneID:534909|KIF13B:XM_002689472:75_cdna Constitutive 1 NULL GeneID:534909 8 GENE KIF13B NULL kinesin family member 13B EMBV3_28243 TCCGAAGACCAAAGTGTGAGTTGTGCAGCTCCGTGTGTTTCTGTGCTCTCTCCTGAGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11312 GGGAAAGTTCAGTTGCAAGGTATGAACTCAAATGTGACTTCATGGTCAACTCAATAGCGG Gene GeneID:535065|CUTC:XM_002698425:384_cdna Constitutive 2 NULL GeneID:535065 26 GENE CUTC NULL cutC copper transporter homolog (E. coli) EMBV3_21343 AGCCTGAGATTCCAACCCCTACATCAGAGCTGACAGAGACTGTGGTCTGTGCCCTGGGGC Gene GeneID:282497|BOLA-DYA:NM_001012678:59_cdna Constitutive 0 NULL GeneID:282497 23 GENE BOLA-DYA DYA major histocompatibility complex, class II, DY alpha EMBV3_15397 TCCTTCTTTTTTCCTCAAGAGGGATCCAGGGCTGAGGGGGAAGTAACAGGAGAGTAGTGC Gene GeneID:444987|NEIL2:NM_001013003:8_cdna Constitutive 1 NULL GeneID:444987 8 GENE NEIL2 NULL nei like 2 (E. coli) EMBV3_13506 ACAGGCAGCCAGAGCTGGAAGGGGGCAATCGCAGCCCCAGAGAGACATTATCTATAAAAT Gene BVV0102_316654 + 0 NULL GK000015.2:47892371-47908632 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00206812 TCONS_00231338 TCONS_00066283 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00220662 TCONS_00153678 TCONS_00129573 TCONS_00177370 TCONS_00175855 TCONS_00218945 TCONS_00175580 TCONS_00250930 TCONS_00008224 TCONS_00021569 TCONS_00137878 TCONS_00244654 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00189806 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00062744 TCONS_00109027 TCONS_00155780 TCONS_00124585 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00064462 TCONS_00178325 TCONS_00010054 TCONS_00040836 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00110323 TCONS_00063486 TCONS_00020756 TCONS_00070839 TCONS_00010471 TCONS_00088088 TCONS_00021595 TCONS_00157613 TCONS_00117619 TCONS_00199424 TCONS_00155778 TCONS_00059708 TCONS_00161835 TCONS_00071033 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00249569 TCONS_00116665 TCONS_00249087 TCONS_00231612 TCONS_00107832 TCONS_00131550 TCONS_00199037 TCONS_00122479 TCONS_00122686 TCONS_00157036 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00218178 TCONS_00252353 TCONS_00224113 TCONS_00007677 TCONS_00197928 TCONS_00229957 TCONS_00152736 TCONS_00116100 TCONS_00250720 TCONS_00010366 TCONS_00038381 TCONS_00222766 TCONS_00242885 TCONS_00209846 TCONS_00023373 TCONS_00207069 TCONS_00175546 TCONS_00209711 TCONS_00116172 TCONS_00009884 TCONS_00013635 TCONS_00252107 TCONS_00148280 TCONS_00249011 TCONS_00176735 TCONS_00031939 TCONS_00039951 TCONS_00169199 TCONS_00131137 TCONS_00155779 TCONS_00063181 TCONS_00009259 TCONS_00111497 TCONS_00209636 TCONS_00007431 TCONS_00245928 TCONS_00233372 TCONS_00244651 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00085967 TCONS_00039904 TCONS_00199802 TCONS_00207755 TCONS_00250246 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00200529 TCONS_00064619 TCONS_00244653 TCONS_00056820 TCONS_00115148 TCONS_00250726 TCONS_00142649 TCONS_00122313 TCONS_00020023 TCONS_00251907 TCONS_00218552 TCONS_00007359 TCONS_00166449 TCONS_00031910 TCONS_00251929 134 XLOC_107421 XLOC_069855 XLOC_125332 XLOC_140827 XLOC_040997 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_133979 XLOC_093441 XLOC_078286 XLOC_107144 XLOC_105634 XLOC_132264 XLOC_105361 XLOC_153873 XLOC_003782 XLOC_012242 XLOC_084087 XLOC_150512 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_115843 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_037471 XLOC_064932 XLOC_094822 XLOC_076129 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_039186 XLOC_108098 XLOC_005606 XLOC_024650 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_066227 XLOC_038213 XLOC_011431 XLOC_042616 XLOC_006022 XLOC_052875 XLOC_012268 XLOC_096068 XLOC_071785 XLOC_121077 XLOC_036490 XLOC_098720 XLOC_042806 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_152512 XLOC_070831 XLOC_152030 XLOC_141100 XLOC_063742 XLOC_080255 XLOC_120690 XLOC_074034 XLOC_074241 XLOC_095496 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_131641 XLOC_155294 XLOC_137409 XLOC_003238 XLOC_119588 XLOC_139451 XLOC_092501 XLOC_070269 XLOC_153663 XLOC_005917 XLOC_022206 XLOC_136073 XLOC_149548 XLOC_128357 XLOC_014040 XLOC_125588 XLOC_105327 XLOC_128222 XLOC_070341 XLOC_005437 XLOC_008165 XLOC_155048 XLOC_090162 XLOC_151954 XLOC_106509 XLOC_018184 XLOC_023768 XLOC_103305 XLOC_079842 XLOC_037908 XLOC_004815 XLOC_067397 XLOC_128147 XLOC_002992 XLOC_150855 XLOC_142854 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_052005 XLOC_023721 XLOC_121454 XLOC_126270 XLOC_153189 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_122181 XLOC_039343 XLOC_034623 XLOC_069449 XLOC_153669 XLOC_087074 XLOC_073868 XLOC_010701 XLOC_154848 XLOC_131872 XLOC_002920 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00218178 XLOC_131641 NonCoding NonCoding - 7:99213677-99241810 - TSS162275 5729 2 TCONS_00218178_2 157 0.905568161982894 3 0.796459547845869 0.000886771403701653 0.00102376193620026 0.000637427881539969 0.00060712227498956 0.000861658363640783 0.000240511398755287 0.0006507876490391 0.000334216051602831 0.000730185142003349 0.000214057065001311 4.3941352307135e-05 8.08315428101829e-05 0.000233250163478171 0.000763452724724909 0.000798732785629046 7.35735537230835e-05 3.13399592248213e-05 3.72164237701071e-05 0.000220143769383598 0.000283865233785678 0.000112882883633591 4.31142807595197e-05 6.58079553498174e-05 3.90706298563263e-05 0.000459456809083102 0.000383679264587045 0.000370165826075435 3.40174828754841e-05 6.31436507816371e-05 7.1976296098839e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 3e-131 475 97.51 0.0488741490661546 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-83 315 68.10 0.168964915342992 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 -0.0148602594801673 0.803029043356466 CTGCTCTAATTTTTAAGATTTCTTTCCTTCTACTAACCCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTATAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTAAGGTATGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGCCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGGTTTTTTCCTGTAATTGAGATCTAATCTTACTGCATTGTGGTCAGAAAAGATGCTTGGAATGATTTCTATTTTTTTTTAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGATGAAATGTCCTATAGATAGCAATTAGGTCTAACTGGTCTATTGTATCGTTTAAAGTTTGTGTTTCCTTGTTAATTTTCTGTTTAATTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGTGGCACTCCCGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGATCATCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAACACATGCAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCGTTGCCATTTACTTTATTGTTTTGGGTTTGAATTTATACACCCTTTTTGTGTTTCCTGTCCAGAGAATATCCTTTAGTATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGAAAAGCTTTTGATTTCTCCTTCATACTTGAATGAGATCCTTGCTGAGTACAATAATCTGGGCTGTAGGTTATTTTCTTTCACCATTTTAAGTATGTCTTGCCATTCCCTCCTGGCTTGAAAGGTTTTTATCGAAAGATCAGCTGTTATCCTTATGCGAATTCCCTTGTGTGTTATTTGTTGTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTTGTGTTTGATCTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCTCCTTGGGTTTATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCAACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACCCCTATGATTCGAATGTTGGAGCATTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTTTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCCTTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTCATTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTGATTTCAAGATTTTGGATCAATTTCACTATCATTATTCAGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGAGCATTTATCCTGTTCCTTTATCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTAAATTTCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCGCTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGGACGCTTGTGTTGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTAGAGTGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATTAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTCCAGTTATTGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATCGATAAAACATCTACGTTAAAGATGAAAAGTTTCTCTACCGTGAGGGTCACCCAGAGAGGTTCACCGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAATCACTTCCTCATGTGCACTCCACAACTGGACCTCTCAGAGATGTTCACGGAGTTATACAGAGAAGAGAAGAAGGAGGAAGGAGACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAACTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGAGTCCAAAGGGAGAGAGAGCAGTTAAGCCAGTAATCTCATTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTTTGGAATTTCAAAAATATGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAAAATGAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAATATAGGTACAAAATTGATAACTAATACCAAAAAGCAAAAGTTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTAAAAAAAAGAAGATGAAAAAGAAAGAGAGAAAAACAAAAAACAAAACCAATGTCACAAAAATTATAAAGAAAATACAGGTACAAAATTGATATCAAATACCTAAAAGCATAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGGGGAAAAAAAGTCACAGAAATTATAAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGCTAAAGAAAAGAAAAAAAAAAACAAGGTCAAAAAATTATAAAAATATATATATATATGAAGTTTGCTGAAGAAAAAAAAATAGGGTCTTTTTTTTGTGCAAAGTAATAGGTTATAAAAGTGAAAATTAAAGGAATAATAGAGGACTTAAATTTTTTTTTAATTAAAAAAGAAAGAAAGAAAAAATGATCATAAAAGTAGTAAAAATATATCGAGGACTTTCTCTGGTTTTGTTGTGAGTATTGTGGGTTCAGCTCATTTTTGGCTAATTCCTTGGTCCGATTTATATTTCTCGAGATCTATAGGCCCCTTCCTATGTAGTCGGTAGTAACCACAGGGTTTTAATCTATTGCCTGTAGCTTCCAAGGCAGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGGTTTCCACCCTGACACAAAGAGGATGGTGGAGGACACTTTTTTTTTTTTAGGCTCACTTGTTCAGTTGCGCAGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCACAGTGCCTCAGCCACACTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGTTCCGCCGGGAACCATCCATGGCCAGCCCTGGGCTGCCTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCCCTCGGGTAGTCCTCAGAGGCACAGACTCAGCTGGGCCTGCATTTTGTGCCCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTAAGCGAGCACGATTGCTGCGACTTATCACCTCCCCGCCACTTGGTTATCTAGGTGTACAACCGGCGCACCTTCTCAGGCAGATGTTAACCATCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGAGATTGCCCCCTTCCAGCTCTGGCTGCGTGTCACCCGAAGGGGAAGGTCTGCAGCCGGCTATCTCTGTTTAGTCCTTTGTTCTGTGCGTGGGCCTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGTGTGGTAGATATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCACTCAGATAGCGCTCAGGGTATTCAGGCCAGGTCCTTACTCTAAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCCGCTTGCTAACGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGCAATCTGCGAGTTTTAATTGTTTATTTATTTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTTGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGACTCCCTTCCCGGGACAGAACTCCATCCCTCCCTCTTTTGTCTCTTATTTTGTCTTTTATATTTTTTTCCTACCTCCTTTCGAAGACTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCTGGCATTCAGAAGTTGTTTTGTGGAATTTACTCAGCATTTAAATGCTTTTTTTGATGAATTTGTGGGGGAGAAAGTGTTCTCCCCATCCTACTCCTCCGCCATCTTGGCTTCTCCCCCTTTAACAGTTTTATTTCAAGCCAACACCTGAGGCAAATATAAGGGATAAGGGATGAGGTCTTAAAAGTTGATCATGTGCTGTAGTAGGTACATATGTTGCCTTCAGCCTACCTCCTTCTTTGGAAACAGCCTCTCCTGACCTTCTTTTTCTACATTATTGTTTCCAGCCTGTCTTCTTTCACAGTACTAATTGGACCAGGTGTGGATCACTGAGCCAAGAAATTCAATCAGTGTTCACCTGGAGAAACAGAACTGAAGGAAGCGGACCTGGACCTGGGGCACAGAGGTGTCAGCATGTTCAAACACAAGCAAGTCAAAGTTACTGTCAATAGGAGAACGATCTAATCTCTGTCCTGCCCATGCACTACCAACAATCCTAAACCTACTATATCTACCAGAACAAAGAGGAATCGGATACCAAGACGGTCTTAACGCTGGATCCACTGCTTTGATTTTAGCAACTTCGGGGAAGAACTTAACCCTGATTCCTCTCTCTAAAGAAAAAGAAAAAAAAGAAAATGAAGAAGAAAATCCTGACTT TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178422 TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178503 EMBV3_20196 AGACTCTCATCAATGTGTTCCACGCCCACTCGGGCAAAGAGGGAGACAAGTACAAGCTGA Gene GeneID:528735|S100A1:NM_001099042:153_cdna Constitutive 1 NULL GeneID:528735 3 GENE S100A1 MGC159706 S100 calcium binding protein A1 EMBV3_36418 GGGACCCAGACTCAGACATTGGTAACCTAACTAGGCAGATCCAGGACATTTGAGCCTGCT Gene GeneID:281873|ITGA5:NM_001166500:10_cdna Constitutive 0 NULL GeneID:281873 5 GENE ITGA5 NULL integrin, alpha 5 (fibronectin receptor, alpha polypeptide) EMBV3_17044 TCTTCCCAAACCAGTTTACTCAGTTGGTGGGTTGCAGGCCCAAGGCTTTTGCTGTCCATC Gene BVT0102_106330 - 1 EMBV3_03576 GK000011.2:98190740-98191878 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41685 CTCAGGGTTTGGGCACTGCTCTGAAGATCTTGTTTTCTGAGAAATTGATTGCAAATATGC Gene GeneID:100125317|ERO1L:NM_001103348:8_cdna Constitutive 0 NULL GeneID:100125317 10 GENE ERO1L ERO1-L MGC159875 ERO1-like (S. cerevisiae) EMBV3_16366 CCGTGGGTATTGGGATTGCCGTGGTGATGATATTCGGCATGGTTTTCAGCATGATCCTGT Gene GeneID:280746|CD9:NM_173900:119_cdna Constitutive 0 NULL GeneID:280746 5 GENE CD9 NULL CD9 molecule EMBV3_06479 CCATGGTCACTGTGGACGCTGAAGCTTTCTTGTACTGTCCTCGTCATGGGATTGATGGTG Gene GeneID:508473|SFXN4:NM_001035060:11_cdna Constitutive 0 NULL GeneID:508473 26 GENE SFXN4 MGC127289 sideroflexin 4 EMBV3_25445 CAATCTTATATCTGAGGGGACCAGTCTAAGGTGGCGGAGTGTAGCTCAGTTGAGGATAGC Gene BVV0101_022470 + 0 NULL GK000005.2:28854788-28857711 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191314 TCONS_00191310 TCONS_00191308 TCONS_00191309 TCONS_00191313 TCONS_00191315 TCONS_00191305 TCONS_00191307 TCONS_00191312 TCONS_00191306 TCONS_00191311 TCONS_00191317 1 XLOC_116887 Coding TCONS_00191317 XLOC_116887 Coding Coding LETMD1 5:28851905-28857638 j TSS143396 4156 3 TCONS_00191317_3 101 4 0.275645498953245 3.21176599860187e-21 5.34016852010996e-20 3.59104582919313e-05 1.67509396241694e-11 0.00134752648618165 3.85240455626411e-22 8.40919569182279e-05 0.00152011906243336 1.64133242245266e-09 0.000657516722594303 0.000178193871678399 4.06265585091894e-05 0.000938534609927147 0.00101110583950954 0.000483414402790382 0.00475177540466595 0.00458946377413486 0.00112896714021474 0.000103433519742656 0.000793559609561635 1.04167485763204e-58 0.000718204412696786 0.000332668206205177 0.00176387618130674 5.64757995722876e-23 3.46418596858355e-05 0.000235579670436958 0.000592072030387531 6.25192515819999e-05 0.000151376441036499 XM_005206297.1 LETMD1 PREDICTED: Bos taurus LETM1 domain containing 1 (LETMD1), 0.0 2506 100.00 0.333974975938402 NM_030809.2 CSRNP2 Homo sapiens cysteine-serine-rich nuclear protein 2 (CSRNP2), 0.0 1379 72.69 0.570019249278152 TCONS_00191317_2 sp|A3KN46|LTMD1_BOVIN LTMD1_BOVIN LETM1 domain-containing protein 1; 4e-64 201 100.00 0.99 1 noncoding 1 1 1 1 0.0442054939540942 0.686858175502709 0.0329507262623285 0.614901581494366 TGCAAACCAAGAATCTTGTTAGATGCAATGTGCACTAAAACTAGAAAGCCTTGTGTCGAGCCATGCTTCTCACACCTTATCTGCCTTCTGTCTTATTGAGACACCGTTTAAAGACTCACACCACTGTAATCCACCAACTGGACAAGGCTTTGGCAAAGCTGGGGGTTGGCCAGCTGACCGCTCAGGAGGTGAAGTCGGCTTGTTATCTTCGTGGCCTGAATTCCACCCATATTGCTGAAGAGAGGTGTCGAACTTGGCTGGGAGAATGGCTACAGATTTCCTGTAGCCTGAAAGAAACTGAGCTGTCCCTCTTGCTACACAACGTGGTCCTGCTTTCCATCAACTACGTTGGGTCAAGGCGCTGAGTGGACATGAAGTGGCTGGCGGCGTCCTGCAGTCACAGCCCAGCAGCGTGGGACCAAACAGCACTTGTCAGCGAGGTCTGCATGCACTGTTAGGTCTGGGAGACAGAGGAACCCGTGCCATGGGCTTCACAGCGTGGTGCCCACGTGGGAGCTGGAAATGAAAGAAACCCTCCTAGTGGGGTGGCCCACGAGAGGTGCCATCCCAACTTCCTCAGAATTCGCTGGAGCTGGCAGTAGCCTCTCTACTGGTCTTAACTGTGGTGTTTTAAGTTCAGATCCTAGGAGGCTGAGCTTTTGCCCCAGGAGGGAATCCTCATTTGGCCTAGGACTTACTCGCTGCTCTAATCTTCACAGCTGTTTTTGTTCCAGACAGGTCCCGGCTGGTGAGGGGAGGAGCACTGCTTATACTGGAGCCTTTACATCCACGCATGTACTTGGGTGCCCCCTCAACACTTTGATATGACCAAAAATAGGGATTTGCTGCTTCTGTTGTTCCCCTCACTGGGACTGGAATAACCACTTCCTGTTTTTTCAAATCCTTTGAGCACTTTTTTTTTTTTTCTGTAAGTGAATAACTTATGGGAACATTCTAATGGAAAAGATAAAAGGAAATGCAAGTGCTTCTTGACTTTCTCCCCAAGTGTTTACAGCCTTCACTTCCCTTGTCTTAATTTCTGGGCTGTACTACAGCCCCTGTGGATCTTAAACTCTTTGCTACCTCCACTGTGTCGCAGCGATCCATCTGTAACTGACAGTGGCTGCCTTCTTTGGTCCATGGATCAGTCCTGTTAAGGTACTAATCACTGCCCAGCCCCAGAGGTCTACACTAAGGTAGTAAGTTGGGTTCAGCTTTTCTCTGTGTATTTCAGTGACCTGTAGTAACTTATTGTAAATGCATGAAGCACTGTTTTTAAACTCAAGTAAAGACTGCCTGAAACCAGTTGCTGGAAATTACTTACACATCCCCCAGTTACTAATGCTCCTTTTACAGGACTGATTGACATAACCTGATGGAGAGATAATTGGTTGGAATAGAACCTTCTAATGGGATGGAAATAACAAAGAAACTGATGTGAAGTTGATGCTCTTGCTGGATTTTTAGACAGTAAACAGGAATAGACACACACACACACATGTAAAGTCATGAATTGAAAAGTGGGCCCCAAGAGTAGGGACTGAGTCAGATAAGCTCCAACAGGGCAGATCAAGACTTGCTTCAGCTGAAGAGGCGCCTAAGGGCACATGATGCAAGTGAAGCTCTTGATGCTCCATAGAATGTTCTATTTTTCCACTGTAAAACATCCCTTTTGTTAACATTAATCCTTAACTGACCTAATTGGTTTTATATATAGTACTAGAGAAGCATCTTTTCTCTAACAAGTAACTGAATTGTGGTCTGCCAAGATAAAGAAAACACCATTCTTTTGAATATTTCTTTAATATTACATTTAAATATTTTCTTTAAATACAGCATTATCACAATGTAAAGGACCTAAAAGCCAAAAAAAAAAATTTTTTTTTTTTCAGAGAACCAGACAAGCTTTGGATTCACATTGAAAATACTACCTGTGTACAGTATGTGAGAAAGGAAATTGGAAAATATTACGAGTTGTAATGAGTGACTGGATTTATCTGGATTTCTTTTATTCCACCTAGTCTAAGCAGGACTGAAGCTCTGCTTTTGTGGTCAGCAGCCTAGCCTTTCTAGCAACCATGCGCTGTAATTCTGTCTGTCCAGCTCAGGTAGCACCAGAAATGAGATGGACTAGGTTGCATAAAAGGCCCTTTGCTTGACAAGATTGTTAATGTTAATATTTAGCATTTAAAACGTTGGGACAGGTGAGTCAGAACTGTAGTTAATGAAGGGAGGGATTTATTATCTTGGGGGTTGGCAATGAGTTTAATTAGTTTGAGCTTCTTGGTCTGATCCCAAATGTCTTATTAACAGGTGAATCCACTTCCTAGCTTAGGCTGGAGCCCTCCTAAGGAGGGAAGATACAGCACTCACCTTCCCCTTCTGACACAAACTTCGAGAAAGATTCATCTTGAGAGTCAAATTCCCAACTAAACTTCAATCTTATATCTGAGGGGACCAGTCTAAGGTGGCGGAGTGTAGCTCAGTTGAGGATAGCACCTATTTCACAGGTGCTTAGGACTCTCGACTCTTTTGTGAGCCTAGAGGAGAGAGATAAGGGCCTATGGCTTATTAATTCACCTCCAAATGTAAAACCAGCAAAAACAGGAATGAACAGGAGAGGCAGAATAAGTTAAAAGGATGTATCCGTGTTGAATATAAGGCCTTTCAGGCTCAGTTTAGGTTTGATAGGTGAAATGCTACTGTGATATACATACATAAAGATTGCTTTCAGACACTGGGGCCTTTAACATACCACAAGAAAAGGCTTTATAAGCAAAATAAGTAGGAACAGTTACCTCCTCCACCAAACAAAAAAAAGGTTTGTACTTTGTCTTTTCCTGGTTAATAAACCATACCAGTAATGAAGCATGATGTGAAGGATGCTAGAGTATTTTGCTCCCTACTGCCTCCCTTTTCAAACAGAGGCAAAAGAGCCATTTAAAAGAAAAAAAAATGAAAACAGAGGCAGTGGTAACTGCTAGTGAAAAGAATTCAGTGCTCAGTGGAGCACATCCTGGAACATAAACTGGACATAAGAGAACAGGAACCATGTCCCCCCTAATAAAGGTACAAACAGAATCTGAGTTCCACTCTATAGACCTCAAAAGTTACAGTTAGAACTTGACTTCTTAGAACCTGGGAGCTGCAGGAAGCATTTAGGAACTGGTTTGGCTTCCAATCTTTATATATCAAGATGGAGGAAGCCAATAAGCATTTGCAGCTCTTGGGAACAGTATGTGAATATAAGAACTCTAACCCTGTATATCCAAGAGGGATCAGGAGGGTAGATCAAAAGGGAAAAACAAGAAAGGTAACACAAAAACACTAGTTGGTGAACTTGCCACATCCTACATTCCTTTAAAGCTTTAATTTTTGGGGGGGAGGTGTGGGGAACAGGGTGGGGAAGAACCTAGGTGAAAAAGCAAGCACAGCACAAAGAAAGTCATCTTTCCAGACAGCAGCCTGTTCCTGCTGCCTCCTCTGGACATAGGTTAATGCTCCATATAGGCCTCCCATGGGATGTGTGAGCCCCAGATTAAAGCTGCCTGATGGAGCTGCGGTTAGACACAAAGGGAAGACTAGCTCTTGATGCCACATCCCAGCCAATCTAGCTCTTTCCCTTCAAAGGAAAAAGGACAAAGCGGGGGCGGGGGAAAGACAAGTTTAACTCTAGTACCTAAAAATGTGTGAAAGAAACACTTCCAAGTTAAGACCAGGAATCCCCAGTGTGGGGAACAGGTCAGAGAACAAAAATGTCAAATATTAACTTATTTACCAAAAAAGGGGGGTCAGGGAAGGTAGGCTGAATTTTTATAGATCTTAGGGGTTTTGTACAGAAGCAGAGACACTCTCAGCCCCTCTCTAGACTCAACCAGCTGACGATTCCAACTGTATTACTATGATACACCAAAGTGGGGTATCAGAGTAACTGCTGAGGAAGGTGAGCTTAACCCTGCCTGGAGCTCAGAAGAGAGGAAGGGGCTTTGTCATGCTGTTCAAACTGATGTTCTGGTCCCTACGTGAATTGCTGCTTGAATTACCCAGCTCCTCCTATGAGATCCTAGTTCTTTGTTCCGAACGCCCAGAAAGCTCAGGATGCAGCCTCCTCTGCCCCAAGACTGTCCCCTGATCGAGCTGGGGCTGGTCTCCTTCT EMBV3_40056 CACCACGGGCAAGATTGTGGCCTTCATGTGCATCTTATCGGGAATCCTTGTCTTGGCCTT Gene GeneID:505732|KCNV1:NM_001166560:17_cdna Constitutive 0 NULL GeneID:505732 14 GENE KCNV1 NULL potassium channel, subfamily V, member 1 EMBV3_03279 GAAACCCGGGTTAAGAATTCTGAGGCTCAGTCTGTCTTAGAGGCAAATCAAGTTGTTCCC Gene GeneID:614893|CDCA7:NM_001037488:46_cdna Constitutive 2 NULL GeneID:614893 2 GENE CDCA7 MGC128588 cell division cycle associated 7 EMBV3_30269 GCCAACTGGAAATTGGCTTTTCCCAAACTGCTTGTTCTCTCAAGCAGAAGAGGCCCTTCC Gene BVV0102_078793 - 0 NULL GK000007.2:58087519-58834004 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18777 CTCGCTCGCATGGAAAACCAGGCCTTTGACCCTGGCTCATGTGGCGCTTCATCCACTCGC Variant GeneID:617287|TRAM2:XM_002697284:66_cdna 841^910 1 EMBV3_24130 GeneID:617287 23 GENE TRAM2 NULL translocation associated membrane protein 2 EMBV3_30839 CCAGGGCAGCAGGGGCAGACCTTTCAACAAGAACTGGATACTGTTGTGAACACTCAGCAT Gene GeneID:511649|LMAN1:NM_001098943:89_cdna Constitutive 0 NULL GeneID:511649 24 GENE LMAN1 NULL lectin, mannose-binding, 1 EMBV3_33333 TGTGCCTGGCCCTGAAGCACCGGAATGGAGAGACGACCTGATCAGGGCCATCAAGAAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31029 CAACAGGCTTATCAGAGACCAGCCAAGAAGGTGAAGAAATGACCCCAGTAACATCTGACG Gene GeneID:785287|RNF12:NM_001099728:55_cdna Constitutive 0 NULL GeneID:785287 X GENE RNF12 NULL ring finger protein 12 EMBV3_29520 ACCGTGTATGAAGGCTTCATTTCGGCTCAGGCTTGTGTTTGTGGATCCTTGCTTTAGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14337 CAGTGAGGAGGAACGTACCACTGAGGCGGAAAAGAATGAGCGTGTGCAGAAGCACCTGAA Gene GeneID:540426|MSN:NM_001046477:121_cdna UTR3_Alt 2 NULL GeneID:540426 X GENE MSN MGC137877 moesin EMBV3_04509 CAGAAAGACCTCGACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGTA Gene BVV0102_372378 + 0 NULL GK000001.2:66658760-66679302 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073419 TCONS_00179596 TCONS_00102424 TCONS_00187774 TCONS_00086675 TCONS_00088663 TCONS_00110364 TCONS_00013240 TCONS_00132043 TCONS_00089461 TCONS_00243948 TCONS_00156595 TCONS_00098385 TCONS_00187485 TCONS_00196908 TCONS_00116871 TCONS_00154811 TCONS_00253149 TCONS_00135550 TCONS_00140493 TCONS_00123109 TCONS_00174545 TCONS_00105301 TCONS_00199297 TCONS_00185627 TCONS_00230483 TCONS_00252175 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00056222 TCONS_00223066 TCONS_00201266 TCONS_00132257 TCONS_00088024 TCONS_00013239 TCONS_00174540 TCONS_00169645 TCONS_00019980 TCONS_00174543 TCONS_00168148 TCONS_00187309 TCONS_00221594 TCONS_00019993 TCONS_00102423 TCONS_00252292 TCONS_00174544 TCONS_00051487 TCONS_00110376 TCONS_00238548 TCONS_00224128 TCONS_00140494 TCONS_00116613 TCONS_00078983 TCONS_00171161 TCONS_00018815 TCONS_00013237 TCONS_00071867 TCONS_00250301 TCONS_00207062 TCONS_00088693 TCONS_00197921 TCONS_00161195 TCONS_00056482 TCONS_00169644 TCONS_00161058 TCONS_00063500 TCONS_00119058 TCONS_00051488 TCONS_00099833 TCONS_00137852 TCONS_00226267 TCONS_00029929 TCONS_00243949 TCONS_00178138 TCONS_00053047 TCONS_00053048 TCONS_00161897 TCONS_00042248 TCONS_00154809 TCONS_00226268 TCONS_00115444 TCONS_00107400 TCONS_00086676 TCONS_00117782 TCONS_00154810 TCONS_00171162 TCONS_00185693 TCONS_00132044 TCONS_00013238 TCONS_00071031 TCONS_00174546 TCONS_00031828 TCONS_00202430 TCONS_00154812 TCONS_00010612 73 XLOC_045184 XLOC_109368 XLOC_061863 XLOC_113818 XLOC_052218 XLOC_053449 XLOC_066268 XLOC_008038 XLOC_080693 XLOC_054245 XLOC_150314 XLOC_095055 XLOC_058631 XLOC_113530 XLOC_118573 XLOC_071037 XLOC_094549 XLOC_156090 XLOC_081773 XLOC_085141 XLOC_074663 XLOC_104638 XLOC_062534 XLOC_120950 XLOC_111680 XLOC_139973 XLOC_155116 XLOC_123974 XLOC_034025 XLOC_136372 XLOC_122914 XLOC_080738 XLOC_052811 XLOC_103408 XLOC_010658 XLOC_102983 XLOC_113357 XLOC_134908 XLOC_010671 XLOC_155233 XLOC_031197 XLOC_066280 XLOC_145215 XLOC_137424 XLOC_070779 XLOC_047868 XLOC_103753 XLOC_009497 XLOC_043637 XLOC_153244 XLOC_125581 XLOC_053479 XLOC_119582 XLOC_098087 XLOC_034285 XLOC_097950 XLOC_038227 XLOC_072804 XLOC_060076 XLOC_084061 XLOC_137960 XLOC_016184 XLOC_107911 XLOC_031635 XLOC_098782 XLOC_025625 XLOC_069614 XLOC_063310 XLOC_071948 XLOC_111746 XLOC_042804 XLOC_018073 XLOC_006163 Coding TCONS_00119058 XLOC_072804 NonCoding NonCoding LOC100848861 21:29773433-29776318 = TSS89250 1054 3 TCONS_00119058_3 54 0.926944971537002 2 0.635228848821082 0.000503437518091544 0.000271708745837114 0.000276565618812286 4.33328803190004e-05 4.68423594046937e-05 0.000103510277923514 0.000122646825030631 8.32400278053164e-05 8.23447789634672e-05 0.00312504040097038 0.00162176020407817 0.00161052902615223 0.000236384771219254 0.00141849031290288 0.000294730978969639 0.0147719322494482 0.00319104090303542 0.00470752190350511 0.000654841515267252 0.000278605901718801 0.000123848402799171 0.00470538169822193 0.00430123960902965 0.00368350929784747 0.000122705383592742 0.000140374704507878 0.0020823003153368 0.00328054981297988 0.00374611996567832 0.00538002575172158 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 1474 99.76 0.778937381404175 NM_152473.2 ERVV-1 Homo sapiens endogenous retrovirus group V, member 1 (ERVV-1), 6e-10 69.8 73.64 0.114800759013283 0 noncoding 1 0 1 1 -0.413014337539021 0.0132539193620166 0.541912349801995 0.00143639346602512 AGAAGCCTCAGATATCAAGTAGTGCTGATGGAAAGTCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCTACCCTCCTGCCTACCCCCAAGGGCTCTGTCCCCTTTCACTCTTGCCTAGAAACCTGCACCACTGGACAAAACCCTGAGAGGGATTGTCTGAAGATCCTCTGACCAACCCTGAGGAAATCCGATACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCAGGATATGCAGGTCAACAAGCTACAACGTGCAGCGCCAGTTCAACAAAGATACAAAGCACTACAGCCGACCACGGAAAATATCACTCACCCTTAGATGGACACCACTATAAGGACTCTGAGGCCTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCGCCGTCCCAGTTCAGCAGGAAGTAGCCAGAAAGACCTCGACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGTAATGTTAGGTAGTTAGAATAGGAAACATGTCCAGAATGGCGGTGGCTAAAAGACAAGGAAGGGAAAAGCCCTCGAAAACGGAACAAAGGAAGGTCCAAGGACTTGAGTGAGGACCTCGGGTAGAACAAACAGGACTCCTGGCCAGCCCAATTTACACAGGGCAGGCCCAGGGGGAGGAAAAAACATTAAAAAAGAGGAGCCAAAGGGCCAGGAGTCTCTCTCCCCCCCACGCGTTCATTCTCTCTCTCTCCTCTGCGATTTTGGGTCGACATGGCCTCATGCCTTGAGGATGTATTTTCCTGTTATTTTCTAAATAAAACTGATCTGTAACACAGAGCTGTAACACTGATCTGTCCAAGAGCTATAACACGGTCTGTTTGAGACCTGAGAGCTGTAACATGGTCTGTCTGAGAGCTGTGACATGCCGAGGGCTTTAATGTCTGTCACTTCAAATTTTTGTTGAGACAGAACCGAGACTTCACTCCCCTGACAATTCCACATATAAGAGTTGCCTAATCAGAGCTCAGAGGAAGGAGCTGTTATGTCCTCTTACAAGAATGAGCATT EMBV3_36670 TCCCACCCAGCAGTCTAAGCTGTGTTTTAAACAAGAGCACGTGTGCCTCAGAGAGCAATG Gene BVV0102_265056 + 0 NULL GK000009.2:60620135-60827026 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23569 CCACATATACCTGTGAAATGGATACGGAAGTGAGGCTTCCCAAGCACTTAGCCTGCTCTG Gene GeneID:281489|SLAMF1:NM_174184:186_cdna Constitutive 0 NULL GeneID:281489 3 GENE SLAMF1 SLAM signaling lymphocytic activation molecule family member 1 EMBV3_09493 ACTAGTCTCTAGGTTAAGGGCTGCACTCTCAGGCAGGGAGCAGAAGTAGAGAAGGGGTTA Gene GeneID:787344|ATG10:NM_001083531:14_cdna UTR3_Alt 3 NULL GeneID:787344 7 GENE ATG10 MGC138057 ATG10 autophagy related 10 homolog (S. cerevisiae) EMBV3_24141 AACGACATGCTCGATGGCTACTCTGGGAGTACACTCAACCCGAGTAGCTTATTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_12127 GCGTTCAGGAGACTGGAGACCAATGGTAATTCGTAATTCTGCCCGAACTGGAGAGGGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25640 GGTCTGATGTCTCCACTTCTACTCTTAGGCCTTATTGCTCTGTTTACAGTGACCCACCCC Gene BVT0102_177937 + 0 NULL GK000017.2:64813278-64817491 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077807 TCONS_00077804 TCONS_00077805 TCONS_00077803 TCONS_00077806 1 XLOC_047148 Coding TCONS_00077807 XLOC_047148 Coding Coding PXN 17:64816161-64859192 j TSS58047 3796 1 TCONS_00077807_1 593 12 0.912061352544736 0.00473804891036114 0.00249625311847115 0.00107177075850902 0.000175604283442172 0.000931043225749015 0.000408106736511317 0.000446529966751245 0.000678815034934616 1.51477927562873e-07 6.92024789995873e-05 0.000264750884672367 3.27722694481819e-10 3.40165765222571e-10 0.000882245292226198 0.000275234298484403 5.80718590584001e-09 2.90962360283383e-07 3.92715460399181e-07 0.000295734250894969 0.00164900753117352 0.000271674716858301 1.35113230701886e-07 1.46297278014106e-07 2.81837306337895e-07 0.00363119127920926 0.00238436688261833 0.00211133646688671 0.000112948656590808 7.34675545751204e-05 9.88851079960647e-08 XM_002694523.3 PXN PREDICTED: Bos taurus paxillin (PXN), transcript variant X1, mRNA. 0.0 4289 100.00 0.626185458377239 NM_001080855.2 PXN Homo sapiens paxillin (PXN), transcript variant 2, mRNA. 0.0 2675 85.15 0.620916754478398 TCONS_00077807_1 sp|P49023|PAXI_HUMAN PAXI_HUMAN Paxillin; 0.0 1061 92.62 0.979763912310287 2 coding 1 1 1 0 1.25202089228765 0.0178664314036985 -0.0704201481451356 0.481406796536391 GGCGGCGAGGAGCGGCCCCGGGACGGGCAGCGAGCGCGACGCCGAGCCCTCTCCAGGCGCCCGCGGCGCCCCCACCATGGACGACCTCGACGCCCTGCTGGCGGACCTGGAGTCCACGACCTCCCACATCTCCAAGCGGCCTGTGTTCTTGTCTGAGGAGACCCCCTACTCCTACCCGACTGGGAACCACACGTACCAGGAGATCGCCGTGCCCCCCGTCCCACCGCCCCCATCCAGCGAGGCCCTCAATGGCTCGGTCCTTGACCCCTTAGACCCCTGGCCACCCAGCACCTCCCGATTCACCCACCAGCAGCCTCAGTCCTCATCCCCCGTGTACGGCTCCAGTGCCAAGACTTCCAGTGCCTCCAACCCCCAGGACGGCGGCGGGCCCCCGTGTCCCCGAGCCGGCGAGGAAGACCACGTGTACAGCTTCCCCAACAAGCAGAAGTCAGCTGAGCCTTCGCCCACCGTCATGAGCTCCTCCTTGGGCAGCAACCTCTCCGAGCTAGACCGCCTGCTGCTGGAGCTGAACGCCGTGCAGCATAACCCCCCAGGCTTCCCCGCAGATGAGGCCAACTCCAGCCCACCACTGCCGGGGCCTCTGAGCACCCACTATGGCGTCCCAGAGAATAACAGCCTGCTAGGGGGCAAAGCTGGAGCGCTGACCAAAGAGAAGCCCAAACGGAACGGTGGCCGGGGCCTGGAGGACTTGCGGCCCAGCGTGGAGAACCTCTTGGATGAGCTGGAGAGCTCCGTGCCCAGCCCCGTCCCCACCATCACTGTGAACCAGGGAGAGATGAGCAGTCCCCAGCGAGTCACCTCCAGTCAGCAGCAGACGCGCATCTCAGCCTCCTCCGCCACCAGGGAGCTGGACGAGTTGATGGCCTCGCTGTCGGATTTAAGGTGCCCTAAGATCCAGGACCTGGAACAGAGAGCAGATGGCGAGCTGTGCTGGGCGGCTGGCTGGCCTCTGAACGGCAGGCAGAGTGGCCCCGAAGGGCAGGACATGGGAGGGTTTATGGCCCAGGGGAAGACGGGGAGCAGCTCTCCCCCAGGGGGCCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAACTGGGGGTCGCCACGGTCGCCAAGGGGGTCTGCGGGGCCTGCAAAAAGCCGATCGCGGGGCAGGTGGTGACGGCCATGGGCAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGCTCCCGGAACTTCTTTGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTATCACAACCTCTTCTCTCCGCGCTGCTACTACTGCAATGGGCCCATTCTGGATAAAGTGGTGACAGCCCTCGACCGGACGTGGCACCCTGAGCACTTCTTCTGTGCCCAGTGTGGAGCCTTCTTCGGGCCTGAAGGGTTCCACGAGAAAGACGGCAAGGCCTACTGCCGCAAGGATTACTTTGACATGTTTGCGCCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTACATCTCGGCCCTCAACACCCTCTGGCACCCCGAGTGCTTTGTGTGTCGGGAGTGCTTCACGCCGTTCGTCCACGGCAGCTTCTTCGAGCACGAGGGGCAGCCCTACTGCGAGGCGCATTACCACGAGCGGCGGGGCTCGCTGTGCTCGGGCTGCCAGAAGCCCATCACGGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGCGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGCGCCCTCGTCCCTCCCCGTGGCCCCTTCCCCGGCCCAGCCTCCTCACTGCTGCTGGGACCCAGAGGCCTCGTCCCGGGGGGGCCGGGGTGGGGGGCAGTGGCGAAGGGGCCAACCCGACTGAAACTGGAACTGCGTCCTCGGCGATGGCGAGAGGACACTGAGGGGTCCTGCCTGCTTCTCTTGTCCCCTGCCAGCGCCGCTGGGCCGCCTTCCTCCTCCCGAGGCTCCCCCAGGCTGCCAGCCCATCACCCTCCCCCGAGGCAGAGGCTGGAGGGTCCCACCTGTGTCCCCACGAGCCCGCCTGGCCAAGCCAGCACCCCACACTGGAGCCATCTCTTACTTGTATTTTGGCAGTGGAGCCGGGGGTGGGGAGGGCAGGCAGGGTCAGACGGGGGCCTCTTTGCATCCTTATCCCCAACCCCAACCTCGTCAGCCTTGTTCTGAGAGTACCGGGGGGGACACAAGCTCCCCCCAGACAATGCCAGCATCCACCCAACCCATCCACCCACCCATCCACCCAAGGGCGGACGTGCCTGCAGGGCCTTGGAAGGTTCCTCACGAGCCTCCTGCCCCTCCCGTCTCCCCAGGCCTGGGCAGCTGCCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCGTTGCCCGGACACTGTACCGACTTTGATAGTTTTCTACACTGAGGTTTGGATTCATATCGTCTGAATTGCTTTTACTTCTCTATACGAAACTGACTTTGAAGAGATTTTACAGACGACTCCTTTTGTACTCCTCCCCGTGTGCACCGCGGTGGCTGCGGGATACGCAGGGCCTGCCTTGTACTGAAGGCTCGGGGTGGGGAAGCAATTCGTATCTTATTTTTTTCTTAGCACAAGCAGGTGAACGGGGAGCGGCTTTGTTGACTCCCCATCTTTAACTTCATAGCTCTCCGGGACTGTTTTTATAAACTGCTGTATTTCGAACCCCCTTCCTTACTCCCCAGGCCAGCAAGTTCTTCACTGAAACCCACCTGAACGGTGTCTTGCCCTCTGGGGCTGAGAATTCCGAACCTCATCCGTCCTGTTTCTGAGCGGGGAGAGAGGGGGACGTCCACTCTGGGGGTGCCCCTTCCCTGTGTAAGCTGTTAGGAGTGCTCACGCCCCTGTGAACTTTCTGGCCACAAAGAGAACATTATCAGCCTCCCCCCTGCTACTCTGGGGATCCTTTCTTCTGCCTCCTCAGGAAAGATGGGATCTGATTTTGACCGTTAGTCTTGTTGATTCCACTGGGTGCGTCCCTTCCCCAAACTTCCTGCCTTCCCTGGAGACTGGTGGTGGCCCCCCCCCCCCCCCCCCACCGAGGAGAGAGCCCACCCAGGCTGTTGCCTGGGGGCCTGATAGGATTCTGGGCGGAGGGACAAGAACAGCAGGAGGCAACAGGAAGCCCCCTGAGGATGAGACAGGCAGGGCTGGGGTTCTGGGTCAGTGGAACGGGGCCCCAGTGGGGTCTTAAGTGAGGACAAGCCAGACCCACTCCACCAACCTCATCAGAGGCTGGATGTCCTGAGCCTCTCAGGAGGAGAAGGGGGTCCCTCCTTGGAGGCGGGGCTGGGAGCAGCCTGGGTCTGGGGAGCTCGGCCAGGTCCTGCCACAGGTCTGATGTCTCCACTTCTACTCTTAGGCCTTATTGCTCTGTTTACAGTGACCCACCCCAGACCCCTCCCCTAGAGGAGGATCTGGGGCTTCCAGAGGTTCTACCCTCTGGGTGGATGGTTATTTGATGATTTGATTTTTAATTTTTTTTTCCTCTGTAAACTTATAACCTGGCTTTTTCCCATTTTAATTCCTGTGATTTATGCCAATAAAGTTTGCCATTATTTTCACCGGT EMBV3_00199 GTTCCTCTAGTCTCAGGATCTGGGGGATTAGGACACATGTCAGCATCTTTAGGGGGGCAT Gene BVV0101_036851 + 1 EMBV3_20352 GK000029.2:47019519-47037687 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15149 AAACGAGGAGCTCACACTCCACAATGACGAGCAGCCCCCATTCGCCGCAACTAGAGAAAA Gene GeneID:614244|LOC614244:XM_002696769:448_cdna Constitutive 0 NULL GeneID:614244 21 GENE LOC614244 NULL similar to ATPase, vacuolar, 14 kD EMBV3_42778 CTCCTCTGTCCCACACGTGTCATCAAGAGTTTATTCTCCATACACCACCTCCACATGCTG Gene BVT0102_208421 + 0 NULL GK000028.2:42140077-42244795 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00999 CGTGATTGGAGATACCACAAAGAAGAACGAGTATGGATTACCAGGGCACCAGGCATGGAG Gene GeneID:533945|CNOT2:NM_001103277:7_cdna UTR3_Alt 3 NULL GeneID:533945 5 GENE CNOT2 MGC140232 CCR4-NOT transcription complex, subunit 2 EMBV3_16202 AGCTGACACTGGAGTGGAAGATGGAGAAACTGTTAACTTGAGGGGTCCAGGTGATGGCCT Gene GeneID:515551|DDI2:XM_002694142:523_cdna Constitutive 0 NULL GeneID:515551 16 GENE DDI2 RSC1A1 DDI1, DNA-damage inducible 1, homolog 2 (S. cerevisiae) EMBV3_15477 AATCCTCACAGAAACCCTAAATCGTGTTGCCTCCCTTTTATAGCGGACATGCGAGGGCAC Gene BVT0102_137089 + 0 NULL GK000019.2:7959818-7988039 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15688 AAATCTGAACAGACCAGTAGCTGATGAGGAGCGTGAGTCAGTAACGAGAAAGCTGCCACG Gene BVT0102_345223 + 0 NULL GK000016.2:49565069-49604195 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10740 GGTAAAGGATTGTTTGTAAGGAAGCCATTAGCCACCTGTGGCCCTTGACTGAGTGCCTGA Gene BVV0102_086465 + 0 NULL GK000016.2:25936857-26712917 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32896 CAAGCATTTGTTAAAGTGATCCTATGTGCATGGTCTGATGCTGGGAATTCTGCCGATTTG Gene GeneID:616069|N4BP2L1:NM_001046574:214_cdna Constitutive 2 NULL GeneID:616069 12 GENE N4BP2L1 MGC137817 NEDD4 binding protein 2-like 1 EMBV3_16848 CACACCTGGTTGAGGTCCAGCTTCGTGAGGACCCACTCTCTGGGGGAGTTAGTTGTGACT Gene BVT0102_374690 + 1 EMBV3_30320 GK000011.2:72868414-72920570 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05421 TGGATTTCCAGTTCCTTGAAGAAGGAGAGGGATGGGGTCCAGGAGTCTCTGGTTTTTGTT Gene GeneID:521868|PTPRH:XM_002695388:244_cdna Constitutive 0 NULL GeneID:521868 18 GENE PTPRH NULL protein tyrosine phosphatase, receptor type, H EMBV3_40078 GTCTCCATAAATTGTGCTGTGGCCGAAGCTGGTATATTCAGGGCTGTGATGCTCGAAGTG Gene GeneID:537285|TRIM23:NM_001080303:14_cdna Constitutive 0 NULL GeneID:537285 20 GENE TRIM23 MGC142532 tripartite motif-containing 23 EMBV3_23277 AACAAACCACGTTTACGGTTCAGGAAGTTTTTCGACTAAGCCAGCTGGAGGTGCGTGACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01905 ATCAAGAGGAACAAGCAGACGTACAGCACCGCCAGCGCAAGCCAGCCACTTCCTACGTGC Variant GeneID:618702|RPL28:NM_001035503:196_cdna 124^247 2 EMBV3_40372 GeneID:618702 18 GENE RPL28 MGC127438 ribosomal protein L28 EMBV3_24018 TGGGCACCCATCCTTCCAGCTTGTTCAGAGCTTATACTCCTTTCACCCTCAGGGATCTAA Gene GeneID:539755|FAM20B:NM_001076185:175_cdna Constitutive 0 NULL GeneID:539755 16 GENE FAM20B MGC139381 family with sequence similarity 20, member B EMBV3_06349 TCACACACTTCCTGTTTGACATGCTCCTTTACTTGGTCTCCGTCTGCCTGTGTGTCTCTG Gene GeneID:522756|ABCA13:XM_002686640:10_cdna Constitutive 0 NULL GeneID:522756 4 GENE ABCA13 NULL ATP-binding cassette, sub-family A (ABC1), member 13 EMBV3_43685 CAGCATGCCCAAAGAAGCTGGCCCCTGCATGGCTCTTTTCCATCGTTGGTGGTATGATAA Gene GeneID:768002|SPINLW1:NM_001077062:1375_cdna Constitutive 0 NULL GeneID:768002 13 GENE SPINLW1 MGC133875 serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin) EMBV3_10379 CTAATTGAAGCTATTGTATCCTGATCCTCGCCTATGCCGTCTCTCCTTCGAATACCCTGG Gene BVV0101_057652 + 1 EMBV3_35950 GK000022.2:53380722-53432382 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00197074 TCONS_00010777 TCONS_00241430 TCONS_00137160 TCONS_00251614 TCONS_00201377 TCONS_00034471 TCONS_00143669 TCONS_00203551 TCONS_00060246 TCONS_00060247 TCONS_00254911 TCONS_00132066 12 XLOC_118739 XLOC_006328 XLOC_148094 XLOC_083370 XLOC_154555 XLOC_123023 XLOC_020687 XLOC_088090 XLOC_124202 XLOC_036632 XLOC_157843 XLOC_080699 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_25679 GCACCTGAAAACGCTTCCTTCAGAGCCAGTACTTCTGGAAGAAATGACAAAGTTGTCGTC Gene GeneID:514267|WDR36:XM_002691068:2_cdna Constitutive 0 NULL GeneID:514267 10 GENE WDR36 NULL WD repeat domain 36 EMBV3_25990 TTACGTATAGTGCCGCTGTGTGTCCTTACGTCCACTGGAATGCATGGATGGTCAGTGTGT Gene BVT0102_436105 - 1 EMBV3_26493 GK000021.2:70861974-70869759 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21399 GCCATCGAACCAAAAAGGAAATTGACCAGGAAGCTGCAGTTGAAGTGTCCCAGTTGAGGG Gene GeneID:780981|LOC780981:XR_084166:39_cdna Constitutive 0 NULL GeneID:780981 14 PSEUDO LOC780981 NULL hypothetical LOC780981 EMBV3_20467 GCCCTTTCTGCAGTTGGAACGTTTTCTTTATATACTATTGCCACCATGGGGAGCGAAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06461 CCTTAGACCCGTAATCACTTCCTGGGACCCTAAGAGCTATGTGTATTTGCCTATTGGGGG Gene GeneID:537341|PTBP2:NM_001110081:174_cdna Constitutive 0 NULL GeneID:537341 3 GENE PTBP2 MGC139378 polypyrimidine tract binding protein 2 EMBV3_33655 GATGCTCAAGGACAGCGCCATGCTGGAATACCTGCGGATCAACAAGCGGATCCTGCAGCT Variant GeneID:281574|EZR:NM_174217:1_cdna 747^992 1 EMBV3_03975 GeneID:281574 9 GENE EZR VIL2 ezrin EMBV3_07686 GGTGAGCTTGTCGCTGGACAGAGGTGGCCTGATACAAATATAGGACCCCCATGGCAGAAA Gene GeneID:527410|PREX1:XM_002692351:180_cdna Constitutive 0 NULL GeneID:527410 13 GENE PREX1 NULL phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 EMBV3_27291 CCAAATGGCATACGGGCCACAGAAATTCCTCAGATATGGACCCCAAAGCAAAAGAGCCTC Gene BVV0101_006209 + 1 EMBV3_19956 GK000010.2:80631541-80965357 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018055 1 XLOC_009167 NonCoding TCONS_00018055 XLOC_009167 NonCoding NonCoding - 10:80676768-80679127 - TSS12208 2182 1 TCONS_00018055_1 138 0.293308890925756 2 0.0754877014418999 0.000870619822302291 0.000488145361602796 0.0012710464570106 0.000611367574493743 0.000444013999868132 0.00016530064548384 0.00049711150127668 0.000666196955068978 4.70081548556445e-05 0 1.31140407715542e-07 0 0 7.97652252459905e-05 0 0 0 0 0.000824887057472071 0.00136528546933692 0.00027350934813016 0 0 0 0.00100378688209549 0.000355179542202986 0.000680702803380811 0 0 6.16286936797427e-05 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 0.0 699 94.08 0.207149404216315 0 noncoding 0 0 0 0 0.103794897039727 0.460928228089073 0.0558262536074149 0.474386875475281 GCTTCAGACACACCCATCTTCCTGAGAAGACTCAACTCAAAGTCTAGAGCATCAATGCCTATGCTCCCCACCAGAGCCTAGAAAAAGAACCATCCCACAGGGTCAAATTAATGACAGTAGCCAGGAATCCTCCTGAACAATGACCACAAGACACAGTTTCTAGGAGAATATGAGCATTCTCCACAGAGCTCCTTCAAGATTATGCAGGAGAGAGGCCTCTGATTCCAACACTGCTTGGCTACCCATTCAGGGTTAACTCCAGCTATACACTTTTAGTCTGACCAGATTGAAAAGTTTGGATTTAAAAATTTTAAGCATTGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGCGCTTTCTTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCGTTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGGAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCACGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGAGCAGGAGGAGAAGGGGACAACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGAGTGCTTCGATTCATAGGGTCGCAAAGAGTCGGACGTGACTGATCGACTGATCTGATCTGATTATTATTTAAATTTTCAGTGCTTCTAAGCCACTCCAAAATCATGACAGTAGCTTTCTCTGTCGGTGTCTTACGAGCAAGGCTGATTCCCTCTGTGATTTTGGTCAGGTTACTTGACCTCCCCACGTCTCAGTTTCCTCATCTGTACCTTGAGGATAATAAAAGCACCTGCCTCAAAGGGTTGGAGTCAGGAGCAGATGAGAGACCACACAAAGCCCTTAGAATAGAGCACAGTACTTGGTAAAAGCTCTGATACATCTTGGCTGTTACAATTATCAAAGACTCTAACTACTCCTAACAAGATATGAAGCTAACTCCTAACAAAGACTCTACTCCTAACAAGATATGAAGCTTTTCTCTTATAGCCGGAGAACCAGTCATTTTGATATCTCAAGAACACTGATATTCACTCAATCTTGACTGCAGCCGATATATTCCTGAGCAAAGTTTCCTTTGTATTGCTCTACAGGAATACTGCTCCCATATGGCTGTTTCTTATAGTCAAAGGGAGACATCAAGCCCCATTTCCAGTGGGTGAATGACAGGCAGATGGAGAGCAGAGCAGCTATACCAAGGTCTCTTCTCAGTTTGGAATAGGGGCACAAATACAGCAGAGGGCATTCTCTTGGGGCTCTCTGGTGTCCAGTTTATCTTAATTCAAACTCAAAAGGGAAGCCTCCCAGAGCAATGTCACGTGGCCCTCAAGGTCAGCCCAATCCTACTAATTCAAAAGGCCACCTGGACAATCTTTCTCATGAACAGATTTTGGCCAAACCAGCTTTAATGCAGCTTCAAACCTCCATGCCCCAGCTCCACTCCCATCTCTGTACTTTGTGGCACAGTGTTGAACAACACAGAATGGTCACTGGGTTCTGTAAAGAAGCCTGGGTCCTCGGGCTTCCCGCCCCACCCCAGGACTGTTTGCTGACCTCTGACCTCATGCCTGGTCATCTGCTCTTTCCACTCTCATGGTAGTTCCCCAGCCTGCCTCCAAACAGCCAGATTCTACAACCAAGACCAGAAGGGCTTCAGGGCTGGAGAACTTCAACCCCAAATGGCATACGGGCCACAGAAATTCCTCAGATATGGACCCCAAAGCAAAAGAGCCTCTGGGGATTCAGTTTCTCTTACCAACTTTGAGCTGAGGGAAAAACATTTTAAAGGCATGTGAGGAAAGCTGTCAGAGAACTGTTTTGCTCAACATCAAATGCATTCCAGGCCTTATCTAATCAGGGAGTCTTCTTCACAGCTGATGCAGAGGCCGTTCCTGCAAATTGTTCCCGAGCCAGGGAAAGGGGCCTTGATTTTAAATACAAAATAATGGTCCTTTTGGCACAGGCAAAGTTGGTTGGCAGCTGGAGGTTTGGGGTGACCCCTGACCCTCTCCCACAGTTCCTCCTGAGTCCCGCTG TCONS_00014947 TCONS_00014948 TCONS_00014949 TCONS_00014951 TCONS_00014950 r 3' 45227 TCONS_00014947 TCONS_00014948 TCONS_00014949 TCONS_00014951 TCONS_00014950 r 3' 47222 EMBV3_21222 GTTCTGCGGTCAGTACCCTGCCGTCTATTATCTTCACCATCAACAGCATCAACTACCGAC Gene GeneID:518205|MGC157405:NM_001083697:97_cdna Constitutive 0 NULL GeneID:518205 29 GENE MGC157405 NULL pregnancy-associated glycoprotein EMBV3_05442 ACACAGTGAGGCCTTGCCGTTGTATGAACGAGCATTAAAGATTTACGAGGACAGCCTGGG Gene GeneID:507522|NPHP3:XM_002685098:68_cdna Constitutive 0 NULL GeneID:507522 1 GENE NPHP3 NULL nephronophthisis 3 (adolescent) EMBV3_41691 CAGTGTTTTCTCCAAGATCAAGCAGCAACTGTGAAAAGCCACCACGGTCCGCTCTTTGAG Gene BVV0102_352529 + 0 NULL GK000023.2:30193867-30237436 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00137070 1 XLOC_083280 NonCoding TCONS_00137070 XLOC_083280 NonCoding NonCoding - 23:30226152-30226594 - TSS102360 442 1 TCONS_00137070_1 35 0.312217194570136 1 0 0 0 0.000293112604494037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.035358294163603 0.770666787727307 -0.016163440411837 0.778482346469125 CCCCACCCCAACCCTAGCCTGGAAAGACCTCAAAGCAGCAGCAGGCAGAGAAGGCGGGAGCGCAAGTTCGTCCCCCTCTGCAGGCCGTTCTCCCGCGCCTCCTCTCTTAGGTGCTTTGGACTGGGGTTAAAAGGAGGAAATCTCGGCCTGCTTCCTCTCCGAAGTCTCCTGAAAGTCCACAGTCAAAGAAACCTCCCCTGAAAGAGTAAAAGCCTGTCTAGATGGAAAGGAAGAAAACCTACTCCGATTGAAAAAGAACAACAACAAAAAAAGGAGGATGGTGGGGATGGCTGCTGTTATCAGGCTGGGAGGAAAGATACAGGTAATGCCAGCTACAAAGTCAACAAGAATCAGTGTTTTCTCCAAGATCAAGCAGCAACTGTGAAAAGCCACCACGGTCCGCTCTTTGAGTGATTACTGCCTTCTTACGATGTCCCAGACC TCONS_00134807 . 3' 10164 TCONS_00134807 . 3' 10605 EMBV3_42351 GGCTGCGAAAGCAAGTCTGTTCCATCTTGTGGCCGTTGGAGGTAAAGCATTTCGACTGAG Gene BVT0102_120462 + 0 NULL GK000010.2:67304487-67566358 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31300 GGCAGCTCCAGGCTTACAGCTTACTAACAACCTCAACAGTAAGAATTCCAGCAGTCCTGA Gene BVV0102_310866 - 1 EMBV3_02296 GK000025.2:26529681-26530296 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146632 TCONS_00146633 TCONS_00144877 TCONS_00146634 2 XLOC_089162 XLOC_088678 Coding TCONS_00144877 XLOC_088678 Coding Coding HIRIP3 25:26523322-26530264 j TSS108685 4834 1 TCONS_00144877_10 544 0.0736450144807613 10 0.304999279642703 0.00126713019671179 0.000585401636024264 0.000867473974684549 0.000711555782549389 0.00050153913174303 0.000224982085003613 0.000503826024673223 0.000639956479691425 0.000759381310384177 0.000464366258911887 5.70574161612079e-06 5.89838601709389e-05 3.85181088887304e-05 0.000225189217070249 0.000344525462679582 0.00039392363103472 3.85157990363128e-50 0.000913197907615697 0.00101972710169891 0.000758981346797826 0.000384111533280695 1.23590762377239e-05 4.40232813081588e-05 7.31812844151355e-05 0.00126672323418112 0.000480507648803852 0.00105184873336059 3.49975708364509e-60 8.61433440315415e-06 0.00015058557138401 NM_001192296.1 HIRIP3 Bos taurus HIRA interacting protein 3 (HIRIP3), mRNA. 0.0 4706 100.00 0.539511791477038 NM_003609.4 HIRIP3 Homo sapiens HIRA interacting protein 3 (HIRIP3), transcript 0.0 1914 74.12 0.616673562267273 TCONS_00144877_10 sp|Q9BW71|HIRP3_HUMAN HIRP3_HUMAN HIRA-interacting protein 3; 0.0 623 70.28 0.998161764705882 0 coding 0 0 0 0 -0.29550259279741 0.249917015938527 -0.0095458421809328 0.867492632568124 CTGCTTTCCAGATGCAGTCCCTGAGGCTTGGAAATGAAGGTGTGGGGCTGGAGCTTGTACCCAGGTCTCCGGCTCCTGACCATTTTATGCTCTTATTTGCTTCTGAGCTGTCTAGCACTTACCTCTACTCCACTCCCCACATCCAGGCTCCTGGTAACGTGCACCTTAAATATTACCTTCACCTACTGCTCCCCATTCCAACTGACACCAGGCCAGGCCACCACCATGTCAAAGCCACCTGCTCAGGACTCTCACCACTCCTGCCAGTCTGTCCTCCCCAACCCCAGCATGACCCAAAATGTAAAACTGATCACATCCTTACTGAGCTCTGCCAGCATTTGAAATGCTTCTTATTATGGCCTCAACTTACCTTTCTGGTCTCCCAACCACACTGTATTCACATCACACCAACCTGTTTTCTCAAAGCTGAAAGTCATTCCCCAGGTTGGGTCTCTATCAAGAAGGCCCATGGTTCACTTAACAAGTAACTACTTACAGGTGAAATATACTATTCCCACTTGCTCTGCTCAGATATCCTTTAAGCAGCAGATTAAATGCCACCTCTCTGAGAAGTCTCCCAGAATCCCTCAGGCCCAGCTGATGGCTGATTCTTCCGTAACTCTCTATTCTCAATAGTCAGGGCCCTCCTTGCTGTGCCAGGCAGTGTCATGTGTGGGTGTCTCCCTCACCACACTGTGGGCTTCTCTGAGGTATAAAGGTGGCTTATATCTCTGGCTCTTGCTTCTCAGATATATCCCACTCTGACCATGAACATGCTGGGTTCCCTCATGCTGCCTATCCTGAAGTCTCCCTCGACAGGATGTTAACTGAGAAGTCTCCCTCAACAGGATGTTAACTGAAAGACCTCCAGGAAGGAACAGGAAGGCAATGAGAAACTAGAATAAAAGCGGAATGTTTTGCCACGAGAATACAAACTCCAAGAAGTTTCGTCTCTCTTGGTTACCACTGCATCCCGTGTGCAAAGCTCAGTGTCTGAAACACAGTAGATACTCAGTAATACTTCAGTGAAAGAAGAGCAGAGGAAGAGGACCAGCAACTAGGCTGCCCTGGCCTCCAAGGCCTAAAGGGAGGGCCCAGGAAACTTGCTGGAGTGCCAGGAGCATGTCCTCCACCAATTTTTCATGACCTTGCTCACCAGAAGAGTCTTCATCCACGTTCTCGTACTGCAGAAGTCGGTCTAGGAGGAAACTGAGGGAAGAGACCAGGAGAACAAGAGTGGTTATTCCCATCTCTGCAGTGTCCTCCGGGCCCTCGCCTCATCTAGCCGGCCTCATGCATTTGTGGCCCACTCCAGGATGGGGTCCGAACGCAGAGCCACAGGAGCCACATCACCCTCTGGCTTCCCTCCTTCCCCCAACGTGTCTCACCTCTTGTCCCGGGACACTTTCAGCAATTTCCTCTGCGCCTTCCTCAGTTCCTCCTGGAAGCACTCGTGTTCCTGTACCACGGGCAAGATGCTCGCTGAGCCAACCACAGTAGTAAATTGGGCCTGGAAGCCGACCACAACTCACCCTGCTCCCTTTACACACAGTCCACTTCACCGTCTGCCGGTCCGTTCATGACCGGCTCCGGGAGAAGCGCCTCAGCTGTAGTCCGGAGTCCCGCTACGCCGAGCCGGTTCAGCCTGGCCTCTCCCGCCTCAACTTCCGGGGACTCCGCAGGGCTGGGTCCGCTGGCACTACAACTCCCGGCGTGCTCCGCGCTCAGGGATCTTAACTACACGACCTGCTCTCCGGAGCAAAACCAAGAAAGGAACGTTGCTTCCAGGCGAAAGATGGCGCCGAATCGAAGCGTGATGTCACAAAGATGGAGGACGCTGGAGGGCGCCCTTAACTGATTCGAAATGTGCTTAGCGATTTGAAGTCACAAGAAGACATTCCCCCCTGAGATTCCTAGTCTTCAGGCGAGGACGCCCTTTTTCGTCTGTCTTTCAAAGTCACAGAGGCCTAGTTGTTGCCCGCGACCACGAACGGAGGGAGCGTCGCGGTTTGATTACGTTACTCAAAGGTGTAGCCGGCTCCGAATAGGTTTCTAACGAGAACTTTAAAAAGCGATTCCTTCTAAGAAAAGGAAGGGGCCACGAGACCCTCCAACTGCCCGGCAAAAACAAGTTTTGTCTGGCAAATTCAGCCCAAGCGGCGCGCTACCGGCCCGCAACGGTGTCCTGCCTCACGGCGTCACGGCACTGGGCGTGCGCAACCTCCTGTCAAACGCTTGGACGGAGGCCGGGAAGAAAAAAGGCGGGAGCCGCCAATATCAGGTGGAGCAAAATGGCGCGGGAGAATGAGATGCAGGAGTTCACCCGTAGCTTCTTCCAAGGCCACCCGGACCTCAGCACGCTTACGCACTCCATCGTGCGGCGGCGATTCTTGGCTCACGCGGGCCGCGACCACCTGGAACCTGAGGAGAAGCAGGCACTGAAGCGGCTGGTGGAGGAGGAGCTGCTGAAGATGCAGGTGGATGAAGCGAGTGCGAAGCAAGAGAGGCTCCACGTTGGCAAAAAGGCGAAAAGGTCTCCTGCTCCTTGCCGTGACCCAGAGAGAAAAAGGTTCCGTTTCAATTCAGAGTCAGAGCCCAGCTCTGCAGCCTCCAGTCCAGACCGCCTCAACCCCTCAGCAAAGAATGGGATGGCAGCAGATGTCACTCCAGCCGAGGATGAGAGTCCAAATCAAGCCTCAAAGAAAGCAACTGAGAGCAGTGATGATGAACAGCAGAGGGACCTGACTGCAAAGATCAGATTAGAGAAGGAGGAGGAGGAGGGAAAGGAGTCCAAGGGCAGGACTAGGAAGAAGCCTGGGACAAAGACCAAGCAGGCACCAGGCAAGGCCTCAGGCAGTAGGAAGCAGGCTAAGGAGGAGAGTGAGGACAGTGAGGAGGACCCTGCCCAGGGGCGGGGAAAGAAAGGCGCTAAGAGCCACCAGGGAAGTGCAAAGGAGAGTGAGGAGGAGGAGGAGACAGTAACCAAGAATAAAGAGAACAGAGAGGAAGAAGAGGATTGGAAACCCACAGACCAGAGCAGTGGAGGGAAAAGGTCAGTTCGGGAGGAGAGGAGCTGTAAGCAGAAAAGCAGGGCAGCACGACTGCTGGGAGAGCGGGGGGACAGAGAGGAACAGAAGGAAAAAGCCGCAGCAAGCAGTGGCGATAGCAGTGAGGAAGATGAAGTGCCCCTAGTACAGAGGAAGCGCAAAGACAGGACCCAGGGGAAGGATGGGAAAAGGCAGAGTGGAAGCAGCGAGGAGGATGGAGAAGACAGCCCGAGGAAAGTGAAGCCAACTACTGGCAAGACAGCCAAAGAGGGCAGTATCAGTGGTGAGGCAAGTGACTCGGAGAAGGAAGTGAGTGATAGCGAGGCAGAGGGGAGCCCCAAGAAGGAGAGGAAGAACCGGTCTTCCAAGAAGAGCTCCAAGAAAGGCAGGACACGAAGTCCCTCCTCCTCTTCCATAGATGGCAGTCCAGAACATAAAGGCAGGAAGGCTGGCTCTGGTCGCTCTGGTGAGGACCACCCCGCTGTGAGGAGGCTCAAGCGCTACATCCGGGCCTGTGGCGCCCATCGAAACTACAAGAAGCTGCTGGGTTCCTGCCGCTCACGCAAGGAACGCCTGAGTGTTCTCCGGGCAGAGCTGGAAGCCCTGGGCATGAAGGGTAACCCTTCCTTAGAGAAGTGTCGGGCCCTGAAAGAGCAGCGCGAAGAGGCAGCCGAGGTGGCTTCTTTGGACATTACCAACATCATCAGCAGTTCAGGCCGGCCACGCAGACGCACAGCCTGGAACCCTTCAGGAGAAACAGCCCCACCAGGGGAGCTATACCGCAGGATCCTCGACTCAGACGAAGAGCGGCCCCACCCCCCGCCCCCAGACTGGTCACATCTGCGGGGCATCATCAGCAGCGATGGCGAGAGCAACTGAGCTCCCCCAACCCTAGGAGGGACTTTCCTCTGGTAGAAAGCATATACAGCATTCCTCTCACCACAGCCCCCAGCTCTGCCTACGGAGCAGAAGCAGCTTTCTTCAGAGGACCCGCAGCCCCCACGGACACAACCTGTTGGGATTCTACTTCTCAGTCTCACATTCTCAATTTAAGGTGTTTACAGGGATTTAAAGACTCAATAAAGGAGTGTTTGAATCACCTTGTCAAAACTGGTCCCCACTCTTAACCCCTGTCCAGGAAGCTGAGGAGCAGCCAACTGTCCCCTGGTCTGATTCCCTTTCTCTGATTTTCCAAAAATCCCAGCCTCCAGACCCTACCATCCAGTCTTGACTCGAGGAGTGTGACTGCTTCCTCCAGCCTGATCAGTGGGCCCCTCTGACCACCCTGCTTTTTAGCTGTCTGATAACCTAACGCCTTGCTGGGAGGAGGATCTGAATAACTGGCCTTAAGAAGAATGTGAAACAAGAATGAAAGGACTGGGGAACAGCTGTTGTTTATGTCTTTCTTCTCCCTCCTGGAAACAGCCACTTAGTTCATGGGCTGACTTTCAGTCTTTAAAGGGGTGGGTACAAGATCTAAACCTGACCAATTGGAACACCCGAGGCCTCTGGCTTCAGATCAAACCAATGGAGTCACTTCAGGACTGCTGGAATTCTTACTGTTGAGGTTGTTAGTAAGCTGTAAGCCTGGAGCTGCCAGGGGCTTGTGGGTGAGGTGAACTTTCTGAAGCCAAAGCAAAGGGAAGCAGAGGTCCAGGGACTGATTGCTTCCTCGGAAGACCTAGATTCAGTCATGTCCAAAGTCAATGAAATCACTGAAATTTTTAGTTATACAGTCCAGTGAGTTCAAGTAACACTATCACCTGCCACCGAACATTCCTTCACAC EMBV3_38875 GGTCACTCTGAGACATGCTGACACAAATGAAATAGCTTTCATCTTCGAACCATCGGATAA Gene BVT0102_008363 - 1 EMBV3_12895 GK000014.2:69317103-69930850 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053788 TCONS_00053790 TCONS_00053794 TCONS_00053789 TCONS_00053793 TCONS_00053786 TCONS_00053795 TCONS_00053792 TCONS_00053787 TCONS_00053791 1 XLOC_031825 Coding TCONS_00053788 XLOC_031825 Coding Coding SDC2 14:69928535-69961008 j TSS39613 3520 1 TCONS_00053788_2 173 5 0.891752894801675 0.00111306218221337 0.000672950640475889 0.0010416502454789 0.000566398368499591 0.000199650708984387 0.000110590919217744 0.000931602453326548 0.000865811512562752 0.000208353055503171 6.3396003325465e-08 4.01620051339102e-21 2.28064564485467e-05 0.000174802774032996 2.57923319496909e-08 0.000711690838672683 3.75403188275787e-44 1.87199697147438e-28 4.33607040842698e-47 0.000968359703882807 0.000897833529723805 0.000239269193025501 2.52987157082666e-48 5.92214775164645e-42 3.78694234236407e-25 0.00107979265361275 0.000644195982970488 0.000537598459207076 5.68992364011754e-34 5.12483333412189e-14 9.96541524622978e-57 NM_001034788.2 SDC2 Bos taurus syndecan 2 (SDC2), mRNA. 0.0 1121 99.84 0.176988636363636 NM_002998.3 SDC2 Homo sapiens syndecan 2 (SDC2), mRNA. 0.0 3452 87.33 0.804261363636364 TCONS_00053788_2 sp|Q58DD4|SDC2_BOVIN SDC2_BOVIN Syndecan-2; 4e-124 352 100.00 0.994219653179191 1 coding 0 0 0 0 0.0252737768971271 0.805143245380364 0.0113613824137576 0.833131455052341 ATGAGAAAAGGCTATTAGGTGAGGGGGTGTCGGAGTGCATGCCAAAGAGGTTACCGTGGCAGCTGCAATCATTCAGCCGAATTCCTCAGCCTCCAAAGCAAGAGAGGCAAGAAGCAAGTGACTTTTCTACCAGTGGTGTGTAAAGCAGCCGGAAAAGAGAGATGAAAGTCAGTCTCTGTTCCAAAGCATTGGCTAAAGGCAGGGATGTTCAGGCCAAGTAAGGAGGCATAGAAATGGATAGCCCCCAGTTTCCACACCCCCAACTGCTGCCTGGAGGCTGGTGAGGAGTGGACACGTCTTTACACCGAGCACAAGGAGCGAGCTCTAATCATGCTGCCCGCTGGTGTCGTCCCAGTTAAATAATAAACTCCACTCTGTGGGCAGAGGCGCTGTGTGGTGGCAGGGTGCCTGGAGCAGTCACATCTATCCGAAACTGGTCCCATCTTGAACGGCTGTGACAGGACCAAAGTGAGAGACCGTGAATGTGGGCTGGGCTCCCCGGTCTTTACCTCTCAGTAAGACCTGTGCTCTTTCAGAAATGAAGATGTAACAAGCAGCCCTGGGTGGCTGTCATCTGAAAAGCGGGCAGAGCTGACATCTGATAAAGACATGTACCTTGACAACAACTCCATTGAAGAAGCTTCAGGAGTGTATCCTATTGACGATGACGACTACGCGTCTGCATCAGGCTCGGGAGCTGGTGAGGATGGAGAGAGTCCAGAGCTGACCACGTCTCGGCCCATTCCAAAGATACCATTCACTAGTACTGCTCCAAGAGTGGAAACCACAACGCTGAGCAAGATACAGGACAAGATCCCTGCTCAGACAAAGTCACCTGAAGAAATTGATAAGGAAAAAGTTCACCTCCCTGACTCAGAAAGGAAAACGGACCCAGCTGAAGAGGACACAAACGTATATACTGAGAAGCACTCAGACAATCTGTTTAAACGAACAGAAGTCCTGGCAGCTGTCATTGCTGGCGGAGTTATTGGCTTTCTCTTTGCAATTTTCCTCATCCTGCTGTTGGTGTATCGCATGAGAAAGAAGGATGAAGGAAGTTATGACCTTGGAGAACGCAAACCATCCAGTGCTGCTTATCAGAAGGCACCTACTAAGGAGTTTTATGCGTGAAAACTCCCATTTAGTGTCTCTATTTATGAGATCACTGAACTTTTAAAAATAAAGCTTTTGCATAGAATAATGAAGATCTTTGTTTTTTGTTTTTTGTTTTTTTTTCATTAAAGAGCCATTCTGGCACTTTAATGATAAAAATCCCATTGTATTTAAATCTTTTCATGTATTTCTTTAGAACAACATAAAATTCAAACTTAACATTGCAGTGTTCTGTGAATAGCAGTGGCAAAATATTATGTTATAAAAACGCTCAATGTATATGGAATCGGTTTAAATTTCTATGCGCAAATATGAAAAGAGTGTTTTTATCCGATGGTTCGAAGATGAAAGCTATTTCATTTGTGTCAGCATGTCTCAGAGTGACCTTATCAAGTTGGTCTTACTTTGTTAATTTATCTGTTGTTCCCCTCTCCTCTGCTCGCCCTTGGAAACAAAACAAAACTCTATGCCTTTTGTAGCTGTTACGGTGCAATTTGTCTTTGGGTAATTCAGATAATGGTAATTTAGTGTATATGTGATTTTCAAATATGTAAACTTTAACCTTCACTTTGTATAAATTTTTAAGTGTCAGACTATCCATTTTACACTTGCTTTATTTTTCATTACCTGTAGCTTCAGGCAGATTTGCAACAGCAAATTAATGTGTAAAATTGGATTATCACCACAAAACTGTTTAGTCATGTCTATCCATTCAGATCTTCTTTTGAGAGGATTTGATGTGAGTTTTTGACAAGCCTCAGCAAACCCAAAGATGCTAACAGTATTTTGAGAAGTTGCTGCAGATTCCTTTGGCCACTGTATTTGCTAATTTCTTGCAATTTGAAGGTACGAGTAGGGACTTAAGAAAAAATCAGTTTTTGTTCTTACAAATGCATTTAAGTTGTAAACGTCTTTTTAAGCCTTTGAAGTGCCTATGATTCTATGTAACTCGTTGCAGACTGGTGTTAATGAGTATATATAACAGTTAAAAAAAAAGTTGGTATTTTATAAGCACAGACAATTCTAATGGTAACTTTTGTAGTCTTACGAATAGACGTAAATTGTAATTTGGGAATATAAAAACTACTGAATAAATCATGTGGCCTAATATTGAAAATGTCACTGTTATAAATTTTGTACATTTTCGATCAAATGTACACCTCCCCTTTGCTAACAACCGTCTGCTCTCAAGGATGTTGTGGGTTTGATTTCTGAGTGTTCCACGGTGTCTGTAAATCAAAACCAAAGAGCTCATTTGATGAAGCTGTTTATTATCAGATTCGCTTCTGAATTGGCCAGAGGAAATCTGAATGTATCATCCTGTGTGTGTTTGGATATAGATATTGGAAGGCTCCCAGGGAGGGAATTGTGAGTTTCACAACCTTTATAAAGATAGCTCAATATTGATGGCAATATTGAGATGGATACCTGCTCTGACAAATAACTTTTAGGACTATGATTTCCAAAGAACTAAAGAGGGCTTTCCTGATGTCGGTATCTATGGTTTAGTCCTCTGGATTGTTTTACCTTTGAAACTGTGCTCCAAATCTCTCCTGAAGTTTAACTGAAGAAGTAATAGATGGAATACCATAGTTCACACTATGGGGAAGAAGAGTCCCTCAGGGAGGTTCTAGGCGTTAAAAGGAGGGCTTCACTGCTTAGGAATGAGGTTGCCAGAGAGCAGTGATGCCTGAGGAAGAGATGGAAATGTGAGGGTACCCTGGCGCCCTGGCTGGGGACTTCCTTCTAACTGAACATTTCCTTTTTCTGTTTTACCACCAATTTTGTTTTAAAGTGTGAACGGCCAAAGTAGGAAGAAGACAGGAAAAACAGCAACCTTTCCAACATATAATTTGCTTTTAACGAAGTATGAATACTTGCTTCATTTAGAGGACATTCCCTGGAATTGCCACAGATTTCAAAAAAAAAAATTGATGCAGCACTCAGAACAGTGTTTACTTAAATTCTTAATGGCCTTAATTCTCAAAGTCCTGTCCCATCACTTACAGAATCAGTCTACTGCAGAGTGATTGAAAGAAGTGCAAGCACTTTCTAAAGCTGCACAATGTCCCTCGGTTATGGAGGTTATGAGTGTAGTGGGTATACCTCTAACTGTGCAAAGCATAGCAAAGTTCAGTTCGTAGAATATTAACTGCTTGGAATATTCATGCCAGGAAAAGGAAATTTCTGGCAAATATTTTGTCACTGCTGTAAAGCAAAATATTTGTTAAAGTGCCAAAATAAAGTCTGTCATGCTGAAAGTAAAAAATCATTGTATAGACTGACATCCAGTTTTCTTCAACTCTACGTTTTCTGCTCAGTTTTTTTTTGTTTGTTTGTTTTTAAAGATTCAGTAAATACTACTATGAAAAGTGTTAGTAATGATTACCAAGTTCAGGAAAATTTT EMBV3_12054 ACCTGCAGCTCGCCATCCGCAACGACGAAGAACTAAACAAGCTTCTGGGGAAAGTGACCA Gene GeneID:618489|H2AFJ:NM_001078089:56_cdna Constitutive 0 NULL GeneID:618489 5 GENE H2AFJ NULL H2A histone family, member J EMBV3_32560 CAACTGCAGCGTCCCTGGTGTGTACCACTTTGGCTTTGACATTGAGTTGTTTCAGAGTGC Gene GeneID:511240|LOC511240:NM_001046080:25_cdna Constitutive 0 NULL GeneID:511240 5 GENE LOC511240 HP-25 MGC137188 hibernation protein 20-like EMBV3_28495 GAAAAGAACTATTTGTTATAACGGGGGAGGTTTTGTAAGTTGACACTAGTGGAACAGTGC Gene GeneID:521772|CNTN4:XM_002696968:128_cdna Constitutive 0 NULL GeneID:521772 22 GENE CNTN4 NULL contactin 4 EMBV3_17645 CTGAAGAAAATCATCCCTACCTTGGAAGAGTACCAACACTATAAAGGAAGCGACTTTGAC Variant GeneID:528135|HNRNPK:NM_001034562:40_cdna 565^636 3 EMBV3_05152 GeneID:528135 8 GENE HNRNPK HNRPK MGC127613 heterogeneous nuclear ribonucleoprotein K EMBV3_32820 ATGAACGCAGTGATTGAAGAACGAGATGCTGCTTTGTCTCAGTGCAAACGGCTGGAGCAG Gene GeneID:528380|MIPOL1:XM_002696726:159_cdna Constitutive 1 NULL GeneID:528380 21 GENE MIPOL1 NULL mirror-image polydactyly 1 EMBV3_04047 GAGTATTTGGAGCGAGTGGGTGATGAAAAGGACACCTACAGTTACCTGGCTTAACCCTCC Gene GeneID:539792|CUL1:XM_002686744:17_cdna Constitutive 0 NULL GeneID:539792 4 GENE CUL1 NULL cullin 1 EMBV3_38410 CAAGGTGAACATTTTCTATCAGGAGCTCAACTACCGCACGGTGGACGAGACACCGGTCTA Gene GeneID:528813|SCNN1D:XM_002694190:678_cdna Constitutive 0 NULL GeneID:528813 16 GENE SCNN1D NULL sodium channel, nonvoltage-gated 1, delta EMBV3_40272 TGACCCAAAGAATGTCTTCATTTGCACTATCCCTTCAGAATAACTGAAGGTTAATTGTTG Gene GeneID:782956|CCDC126:NM_001082472:47_cdna Constitutive 2 NULL GeneID:782956 4 GENE CCDC126 NULL coiled-coil domain containing 126 EMBV3_04667 GGCTCTAATGTTGAATTCTGGAATCCTTTTTGCGTTGGGTGATCGCGAGTCCTAAAGTGC Gene GeneID:781493|LOC781493:XR_084586:204_cdna Constitutive 0 NULL GeneID:781493 14 PSEUDO LOC781493 NULL similar to Collagen alpha-1(XIV) chain precursor (Undulin) EMBV3_37708 TCTGTGATGTCCCCCCTCTCGTGAACTTGGCTTGTGATGTAAAAGAGACGTACCAGGATG Gene GeneID:509125|LOC509125:XM_002693697:366_cdna Constitutive 0 NULL GeneID:509125 15 GENE LOC509125 NULL similar to olfactory receptor Olr455 EMBV3_03720 GACTTTTCTGGAAGGGTTGTGTGGTCATCTCCAATGTTGCCCTCCCAGCCAGCAGTTGGA Gene BVV0102_003466 + 1 EMBV3_24495 GK000025.2:1048241-1060984 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02613 ACACCACAGCTGAGTCATCATCTGCTCAGGGTCCTCCTGCAAAAGCAAGCTCTGGGCATG Gene GeneID:506584|NMB:NM_001075270:83_cdna Constitutive 0 NULL GeneID:506584 21 GENE NMB NULL neuromedin B EMBV3_07072 ATGGGAGAACAGGAGCAAGAACAAGAGGACTGGAAGAAATACATTACTGGCACAGATATG Gene GeneID:534351|TMED5:NM_001046377:171_cdna UTR3_Alt 2 NULL GeneID:534351 3 GENE TMED5 MGC128799 transmembrane emp24 protein transport domain containing 5 EMBV3_39018 CTCTGCACAGCTTTTGGGATCCTAGCTTCGTGACAAGGGATCAAACCTGTGACTGCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37135 ATAACAGCCTGCAAGACCACAGTGGGTCAAAGGATAAAGGTCTCAGTGATGTGGCAGGTG Gene GeneID:505423|LGR4:XM_002693488:123_cdna UTR3_Alt 2 NULL GeneID:505423 15 GENE LGR4 NULL leucine-rich repeat-containing G protein-coupled receptor 4 EMBV3_27343 TTGCAACAAAATGTCTCCATGCATCATGGTTACGGGAAAGGGGGTACCTGATGTGAACAC Gene GeneID:524105|SPO11:XM_002692421:394_cdna Constitutive 0 NULL GeneID:524105 13 GENE SPO11 NULL SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae) EMBV3_16248 GGATCCTGCTGGGGTGTTTGGTCTTCTCGGTGTTCATTAGCCTTCCTGTCATTAACAATT Gene GeneID:100300284|LOC100300284:XM_002687793:74_cdna Constitutive 0 NULL GeneID:100300284 5 GENE LOC100300284 NULL similar to taste receptor, type 2, member 7 EMBV3_32330 CTCGGGCTGGGCAGAAAGGCTACCATCACCGCACTGAGATCAACAAGAAGATCTACAAGA Gene GeneID:282688|Rpl3:NM_174715:7_cdna Constitutive 0 NULL GeneID:282688 5 GENE Rpl3 NULL ribosomal protein L3 EMBV3_21944 TCCAGGATGACTGAAGCTAACCTTTCTGGTGAGTGAAGAGGACATGACAGGGATGGAACG Gene GeneID:100174923|LOC100174923:NM_001143745:8_cdna Constitutive 1 NULL GeneID:100174923 2 GENE LOC100174923 NULL hypothetical LOC100174923 EMBV3_08650 CCAGAAGGGGAGTCTTCAAGGAAATACCGTGAAGTAAGGGATGAAGATGATGATCAGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36668 TGGAGCTACAGGTCTCTCTACGCCCACATTTCAACCTCCAGGGGCTGTGTGGCCTGTTGC Gene GeneID:618430|LOC618430:XM_002688956:96_cdna Constitutive 0 NULL GeneID:618430 7 GENE LOC618430 NULL similar to Tyrosine-protein kinase-protein kinase SgK269 (Sugen kinase 269) EMBV3_23182 CTCTTTTCCCCCTCTTTGCTCTGCTCTTGAATCTAAAGGAACATTGACTATATTAACTGG Gene BVT0102_148223 + 0 NULL GK000010.2:36504316-36522869 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16908 CAAGCTCGAAGAACTTGAATGGAAGCTAGCAGAAGTTGGAGCAATACAGACTGATTTGGA Gene GeneID:531753|PDCL2:NM_001040551:107_cdna Constitutive 1 NULL GeneID:531753 6 GENE PDCL2 MGC133928 phosducin-like 2 EMBV3_27994 CTTGGGCCCGCTGAACATTCCCCTGCTGGCTGATGTAACCAGAAAGTTGTCCAGTGATTA Gene GeneID:286793|PRDX2:NM_174763:14_cdna Constitutive 1 NULL GeneID:286793 7 GENE PRDX2 NULL peroxiredoxin 2 EMBV3_03384 ATTGTGAAAGGCAGATTCAGGTTTCTGGTTTGGGGCTTTCAGTTTCCTCTTTTAAGAAGG Gene GeneID:338061|NDUFB5:NM_176656:8_cdna Constitutive 0 NULL GeneID:338061 1 GENE NDUFB5 NULL NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa EMBV3_42353 TATGGTCCGTACTCCCCTGACGAGTGCATATCTTTGCCTGTTTACACAAGTGCTGAGAGG Gene GeneID:512287|LOC512287:XM_002707727:64_cdna Constitutive 0 NULL GeneID:512287 15 GENE LOC512287 NULL similar to dynein, cytoplasmic 2, heavy chain 1 EMBV3_13161 GAAGGCCTCCCAACCACCATTTCTGCTGTGTCCTTAGGATGTGCAGTAAAAAATATAGAC Gene GeneID:517876|ARID2:XM_002687323:138_cdna UTR3_Alt 2 NULL GeneID:517876 5 GENE ARID2 NULL AT rich interactive domain 2 (ARID, RFX-like) EMBV3_07415 GGACAAGCAAGCCAACGGCCTACTGTGATCCAGCCTGAAATGCTGGCCTTAAGTGATTTT Gene BVT0102_217451 + 0 NULL GK000030.2:4382819-4517285 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39132 ACCTGGATCTGACCCATCAGGTGACAGGGACAAAACTTGCACAGCCCTAGTAGTTTGCAA Gene GeneID:536143|GCN1L1:XM_002694522:443_cdna Constitutive 0 NULL GeneID:536143 17 GENE GCN1L1 NULL GCN1 general control of amino-acid synthesis 1-like 1 (yeast) EMBV3_12408 ACCTGGGGGATGCGAACGAGCGTGCAAGCGTAACGAGTTTGGAGCCATATGGCAGTCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14162 CCCGAAGGGTTCCTTTAGTGTTCTGTGGGGAGTTTGATCACCGGATATCATGGAGTCTGG Variant GeneID:532936|AK6:NM_001075975:90_cdna 102^334 2 EMBV3_10897 GeneID:532936 20 GENE AK6 MGC139662 MGC159662 TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa EMBV3_08667 GAAGTCACAAGTCAAGCTCAATACCAAAGTAGGTACTCTCACTCTGCAAAATGGGGCGAG Gene BVT0102_163538 - 1 EMBV3_18223 GK000024.2:59571919-59670120 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29744 GGGAGGAAGAGCTGTGGTACTGGTTAAAAAAGTGAGTAAATGCATTTACAGCAATACATT Gene GeneID:508431|ITCH:NM_001082428:955_cdna Constitutive 3 NULL GeneID:508431 13 GENE ITCH MGC152011 itchy E3 ubiquitin protein ligase homolog (mouse) EMBV3_37034 ATGCCGGGCTCTTCTGCCGTCTTGATGCCAAGGCTGAAGGCTGCATTGACTCACCACCCT Variant GeneID:534129|CREB5:XM_002686873:105_cdna 598^708 1 EMBV3_37224 GeneID:534129 4 GENE CREB5 NULL cAMP responsive element binding protein 5 EMBV3_28460 TGCCTTGAACCAAGAAGATGCTTCTCAAAGGGGAAGTTCATCACACCTGCTCACTATAGT Variant GeneID:529184|RPAP2:NM_001103266:165_cdna 144^258 1 EMBV3_17265 GeneID:529184 3 GENE RPAP2 MGC142888 RNA polymerase II associated protein 2 EMBV3_27040 TGTACAGCACCACTAACGTTCAGGTCTCCCCAGCAAGAAGAACATGGAGTCGAGAAACTG Gene BVT0101_009984 + 0 NULL GK000020.2:444381-1365734 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15331 CACGCAGTGACTTATACTCAACATTAGGCACTGGTCATATCCTTCAAGCGTACTACAGGT Gene BVT0101_025154 - 1 EMBV3_21336 GK000011.2:4618884-4630685 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026755 TCONS_00026753 TCONS_00026754 TCONS_00026752 TCONS_00026749 TCONS_00026756 TCONS_00026751 TCONS_00026750 1 XLOC_015102 Coding TCONS_00026749 XLOC_015102 Coding Coding AFF3 11:4628612-4655114 j TSS19123 4381 1 TCONS_00026749_3 246 0.0287605569504679 8 0.834987358967586 9.90635359825182e-21 0.000634765080779471 3.80676653195414e-32 7.27295363081951e-48 2.06119935358062e-21 5.17498108403843e-05 0.000158426273728626 8.54428358865428e-05 2.61209981866182e-20 0.000472489664166449 1.80378037371278e-05 6.51770126635777e-22 4.06156258821845e-05 3.74608044818492e-26 9.84766516614169e-24 1.3218544073333e-22 3.78936499609999e-06 7.01555330765269e-06 1.03278809202485e-33 5.64898347453676e-05 0.000153899483166418 1.28077036838351e-09 6.7457123167158e-06 7.06213165633496e-06 1.47771423177365e-08 0.000125410820348036 0.000134545789424632 1.77877577854676e-30 3.80172225568577e-05 1.26279823636756e-14 XM_002700703.3 AFF3 PREDICTED: Bos taurus AF4/FMR2 family, member 3 (AFF3), mRNA. 0.0 7746 100.00 0.980141520200867 NM_001025108.1 AFF3 Homo sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 0.0 2030 76.83 0.6108194476147 TCONS_00026749_3 sp|P51826|AFF3_HUMAN AFF3_HUMAN AF4/FMR2 family member 3; 1e-160 481 97.56 0.995934959349594 1 coding 0 0 0 0 0.306695294421507 0.160450034710502 -0.0276853607609557 0.547643495691286 TCTAGGGAGGAGAGAAGGGCTTCTAAAACAGTGCTGAAACATTGACCAGCCAGTGAGGACACCACTCACTGTGGCTGAGGGACTTGGCCACGCAGTGCAGATTATTTTATGCAAGAAGCTAAGCGAATGAAGCATAAAGCAGATGCGATGGTGGAAAAGTTTGGAAAGGCTCTGAACTATGCAGAAGCAGCCTTGTCATTCATTGAGTGTGGAAATGCCATGGAACAGGGCCCCATGGAGTCCAAATCTCCTTACACCATGTATTCAGAGACAGTTGAGCTCATCAGGTATGCCATGAGACTAAAAACCCACTCAGGTCCCAATGCCACACCAGAGGATAAACAGCTGGCTGCATTATGTTACCGATGCCTGGCTCTCCTGTACTGGAGGATGTTTCGACTCAAAAGGGATCACGCTGTAAAGTATTCAAAAGCACTTATCGACTATTTCAAGAATTCATCTAAAGCTGCCCAAGCCCCATCTCCATGGGGGGCCAGTGGAAAGAGCACTGGGACCCCATCCCCCATGTCTCCCAATCCGTCCCCCACCGGCTCCGTGGGCTCTCAGGGGAGCCTGTCCAACAGCAACGCCCTGTCCCCATCCACCATCGTCAGCATCCCGCAGCGCATCCACCAGATGGCGGCCAATCACGTGAGCATCACCAACAGCATTCTCCACAGCTACGACTACTGGGAGATGGCAGACAACCTGGCCAAGGAAAACAGAGAATTCTTCCACGACCTGGACCTGCTCATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAGCAGGGCCTGCACTGGCTGCGAAACAGCGCCCACCTGGCCTAGACACCTGCCCCCGGCTGCGGCGTGCACGCATCTCCACGGATGGCCCAGCGTTTCGGGACACTGTGCTCCCCACGTTCCCGGCCACAGCATTTCTCGAAAGGCGGTGAATAGTTTTCAGCATCGAACAGCAGTCTTTCCTCCCAGGGCATGTGTGTTTGTGTATGTGGGTGCAGAATGAGCTGCCCGTGGAGGTGTGTAAGACACAACAGTTCTCTAGAACACATCTTCTTTGTCTAGTTTCCAGCCTCCCAGGCTAGACAAAGTGATCTGACATTTCTGATTAGAGAAGACACACACTCACACACACACACACACACACACTTTCTAGTTCAAAGCTAAACCGTGACTTCCTAGAATATTCAACCAAAATCTCATGGGTTAGTGAACCAGGTGCAATATCGCACACCAAAAGCTTGACTGCCAGTTAAGATGAACCCAGCTCTTATACTCTTGATTACTTTCAGTATTAATATACTTTTCTCCCATTATTTTTTTATTGTCTGTATTCATGGGTATTTGAATAATGAAAATAAGTCAGTTATTTTTGTGTGGACGTTTACTAGACTGCATGTTACCAAATACCCTGCCTTTTGTCTGGTCCCTCCCCTCCTCCATCCAGTTCTCCATCTAACTCTCCCATCAGCTAAACGTGTTAGACGCAAATGAATCGACTCCCATGGGCCTTCCCTGCCCTGCCCCCCAAAATAGTATGACCATGACCCTGACCCTGAGATTTGGTGGGGGGAAAAAAAAAAACCCTCCATGTCTTTGAAAACTCACCCAAAGGAAGCAGCAGCAGCTGTGTCCCTGGGCTCAGTGAGAAACAACCCTCTGCCCCCACCAGGAGCCCAGCCGGCCCGTGTTTCTTCCTCCCGCCACTGTGACCCCAGGGGCTGTGGAGCCCCATGGGCTTGTCGGCCGATACTTTTCAACAAGCCTTTTCTCTGTCTGAGAGCTTTCTTACCCATGTTCTTGGCCGAATGAGGACATTGTCTAGGGTGTCCCTTCCCTCGGAATCTGTGTCTGTTGCTTTGTCAGGCCAAGAACTCTTTGCTGCCGTGATCCTGTCTAATCCTCCCTGTCTTTGGAGAAAGTGCCGTGCGGACCTTGAATGCATTTTTGACCCGGGGGATGTATTTCAGTGTCTGATGAGCAGGTTGCTCCCCACAGAGCAGGTGATCCTGGTAGTCACTGCAGTTCTGTCTAGGGTAGCAGCGACCTGAACATCATGCTTAGGCCCCCGTGCGTCCGGTACGTGTATGTCTTCCCCCGATTCTTTGTTTTGCTTTTTTTTAATTAAGTTTACATTTTAGTTTTTTCAACATTTTGTTTACAATGTTTGTCTGAAATTTCTTTTATTGTCTGAAATTTATTTCTTTTATTGTCTCTTATCATATCCTAGATTTAGTGTTCTTGTTAAATATATTTGAATACAAAGATATTGGTAAAAAAAAAAAAAGAAAAAGAAAAACTCCTGGAACGGAGGATATACCTTGCCATGCTTTAAAAACAAAAATAATGACCTTGATGCCTCTCACTTGACAAAATTTCCCCAAGACAGCCTGAGAAAGACAGGTGATGGGGTACATGGAATAATCCATTTTTCAAGGTGATGATAACGTAAAACATGTGTATCAGATGCTAATGGTCTCACTGGTTTGGTTGCAGTGTTAACATTTTCGTCAGCCTGATCTGTGGGTGGGAAATCAGATTGCTGTAATTCCCTAGCTCTAAGCCCTGATTCAAAACCGTGCAAGTGATTGAACAGCTTTGGTGATTTGAAATTCATCTCAATGAACAAGTGAAGGCTTGTGAAATTTGCATTTGGTGTTGGCCTTTCAGCAGCTGGAAGTATTAACAATACTTCTTTTTTCACATTTATCCAACTGAGGTGCTTCTGACATGCCTTTCACTAATTATTACTAGATTTCCCCTTCCCATTGGGGTCTAACTTAAGAGATTTTTATTTTATTTTTTTTGGAGGACTGAGGCTGAGTTCTACTCACTGCTGCTGAATTCTGATGAAATGTTCAGACTTTGATGTAAAAGGACAGCCCGCGGTGTCCCTCATGCATCCCTGGGGTGCCTTTCTGATCTTATTCACCTTTAAGCCCCAGGCCTCATGGTGGCGTCCACGCGGTGTGCTCACGAGTCAAGGCACAGGCTGCCTCCAGCTGGCTGTGCCAGCAGCAGTCAGGACGCCGTGAGCCGCAGTCACTTCCTGCAAAGCGTGAAGCCAGTGGACTGGGGGCAGTCACAGCATGCCGTTCCTCTCACGGTCGCATCTCACTGGTGCAGCGTGTTGGGGCAGTGGTTGTTCCTTGCTTTGGCATCAGTGCTTTGGATAAGGAAGCATCTTCTGATCATTGCTGCTTCCTTTTCTTTAGTTTTGTTCAAAGTACAGATAGCTCTCTTGTGTTTTCTGATTATGAAACTAATAGACACTCATGGTGAAAATTCAAACGATGCAGACAAGTGTAAAGTAGGAAGTACTCAGTCCCACCCCCCAGAGACAGCATTGCTCACCCTTCCCTGTATATCCTTCGGGAGAGCCTCCCATTTAAATGTAGAATGTCTATCATCATTTCCTTCTATTTGAAGACATTATTTCTTCAGAAGTTCAGTACAAGTTCAACTGGCCTTATCCCTCCATGACCTGAATGGACCTGGATCACAGTTGTTAGAAATATCTTTGAAAGAGAGGAACCCAAATATATTCATGATTAAAATGTGGGATTTGTTACCATTCGACACAGATCAGACTCACATGCAGAATTGTGCTTGGGAAGAGAGGTTCTGTTAAAACGCTATTTCTGGAAACTTTCAAATTGCAAACGGAAAGTCGGACCCACTATCTAAAGAGAAATGTACTGGAAAAAAAATCTGAAACCTTGACAAACTGTGTATTGGATTGAACATGTGGAATCAACGCAGCGAGCTTTTCTGCACTAAAACGTACCCTCGTATCTACAACAAAGATGTGTGTATTACATGACAGTGACGTGTACATTTCTGACATCCCATACATCATACACACAGTTTGTATAAATGCATACATTTAAAAATATATATGTACAGTACAGCTACCATAAACCTGTAGTACGCTTGAAGGATATGACCAGTGCCTAATGTTGAGTATAAGTCACTGCGTGTTTAAATCACCTCAGAAGTGCAGTAATTGTTATCAAATTAATCAGTGCAGCCAACCTTATTTATGAACCACATCTTTGAAACTGTGCAGTAGTATATACATATATATTTTTAAATAACATTTTTCACAGTTTTCCAGAGTTACTGTTGAAATCTGTATCACCAAAAAAAAAAAAAAAAAAAGGCAAGATTTTTTTTAATGATGTAGACACTCTCCAAACCCAGTAATCTGTGTGTGATTTCCTGTGTGTAGATACCCAAGACACTTTAGCAGTCACCAGCCTTAATGCATGTACAGGATATTATTGTGACTTAATTTATCTGCAATTTTTAATCCATGTGAAATTGGAATTTATAAACTGACTTGGATTAACTATGTCTG EMBV3_03336 CTGTTGATCTGTCCCACAAAGCTACCGGGAAGAGTCCTAACAACCAGAGGATTGCCGGAG Gene BVT0102_246303 + 0 NULL GK000025.2:1628540-1680109 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26485 ACTGAGTAGTGTCATTGAGCCCCTGTTGGTTTCCCTTAGTCGTGGCAGATGACAGGAATG Gene GeneID:513185|PARP12:XM_002687067:211_cdna Constitutive 0 NULL GeneID:513185 4 GENE PARP12 NULL poly (ADP-ribose) polymerase family, member 12 EMBV3_16237 TGAACCGAGTCCACAAGTTCAGACCCATGTGTAACGGATTGCTTCATGGTTGTCAGAGGC Gene BVV0102_256340 + 1 EMBV3_02856 GK000011.2:99437852-99441597 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026226 TCONS_00026230 1 XLOC_014945 Coding TCONS_00026230 XLOC_014945 Coding Coding LRRC8A 11:99411392-99438995 j TSS18847 4265 1 TCONS_00026230_2 621 5 0.845663357727701 0.00256368914357494 0.00160142115698258 0.00241136072913885 0.0010424755168489 0.00188364535822625 0.000430237880650096 0.000863077383103822 0.000813533881143645 0.000491928384459372 0.000497536632718253 4.32569396739068e-05 8.96730460978983e-05 0.000100772627481973 0.000595382174342315 9.98480759160344e-05 0.00328930793321229 0.000572552933083141 0.0022253313146653 0.00108607576639483 0.00230862530825018 0.000591466236137335 0.000384208911432119 0.00141500724167669 0.00145116862134247 0.00337127019458727 0.0024588684773246 0.00136113649866932 0.000405517656914872 5.81069025273465e-43 0.000195120685316582 XM_005213203.1 LRRC8A PREDICTED: Bos taurus leucine rich repeat containing 8 family, member A (LRRC8A), transcript variant X1, mRNA. 0.0 6616 100.00 0.85978898007034 NM_001127244.1 LRRC8A Homo sapiens leucine rich repeat containing 8 family, member A (LRRC8A), transcript variant 1, mRNA. 0.0 3965 83.47 0.858147713950762 TCONS_00026230_2 sp|Q8IWT6|LRC8A_HUMAN LRC8A_HUMAN Leucine-rich repeat-containing protein 8A; 0.0 1252 99.19 0.998389694041868 5 coding 1 0 1 1 -1.51950201361171 0.0193800877313201 -0.0314016144004794 0.635086687799535 CAAAAGGAGGCGCCGGAGGGGCGCAGTGACCGGCAGTGGGACAGAGCGGCAGGGGCTCGGGGCTGCCGGCTGGGCGGCCGGGCGCGGCGGGCCCAGGCAGGCGGCTTCCATGGAGCGAAAGGAATGCCAAGACCCTGCCCAGACAGACGTGGGCCAGCCTCAGCACCATCAGCCAGCTCTCAGATAGCAGAGCCTCAGGATTGAACCATGATTCCGGTGACAGAGCTCCGCTACTTTGCGGACACGCAGCCAGCGTACCGGATCCTGAAGCCGTGGTGGGACGTGTTCACCGACTACATCTCCATCGTCATGCTGATGATTGCTGTCTTCGGGGGCACGCTGCAGGTTACCCAGGACAAGATGATCTGCCTGCCCTGGTGCTTCTGCACACGCTCATCTTCCTGGCCTGCAGCAACTTCTGGTTCAAGTTCCCGCGCACCAGCTCCAAGCTGGAGCACTTCGTGTCCATCCTGCTCAAGTGCTTCGACTCGCCCTGGACCACGCGGGCCCTGTCGGAGACGGTGGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAAGATGAACGGCTCCATGGACAAGAAGTCATCGACGGTCAGCGAGGACGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCTCGGATCGAGCAGGGCATCGTGGACCGCTCGGAGACGGGCGTGCTGGACAAGAAGGAGGGCGAGCAGGCCAAGGCGCTGTTCGAGAAGGTGAAGAAGTTCCGGACCCACGTGGAGGAGGGGGACATCGTGTACCGGCTGTACATGCGGCAGACCATCATCAAGGTGATCAAGTTCATCCTCATCATCTGCTACACCGTCTACTACGTGCACAACATCAAGTTCGACGTGGACTGCACGGTGGACATCGAGAGCCTGACGGGCTACCGCACATACCGGTGCGCCCACCCGCTGGCCACGCTCTTCAAGATCCTGGCATCCTTCTACATCAGCCTGGTCATCTTCTACGGCCTCATCTGCATGTACACGCTCTGGTGGATGCTGCGGCGCTCCCTGAAGAAGTACTCGTTCGAGTCCATCCGCGAGGAGAGCAGCTACAGCGACATCCCCGACGTCAAGAACGACTTCGCCTTCATGCTGCACCTCATCGACCAGTACGACCCGCTGTACTCAAAACGCTTCGCTGTCTTCCTGTCGGAGGTGAGTGAGAACAAGCTGCGGCAGCTAAACCTCAACAACGAGTGGACGTTGGACAAGCTGCGCCAGCGGCTCACCAAGAATGCGCAGGACAAGCTGGAGCTGCACCTGTTCATGCTCAGCGGCATCCCTGACACGGTGTTCGACCTGGTGGAGCTGGAGGTGCTGAAGCTGGAGCTGATCCCCGACGTGACCATCCCGCCCAGCATCGCACAGCTCACGGGCCTCAAGGAGCTGTGGCTGTACCACACGGCCGCCAAGATCGAGGCGCCCGCCCTGGCCTTCCTGCGCGAGAACCTGCGGGCGCTGCACATCAAGTTCACGGACATCAAGGAGATCCCGCTGTGGATCTACAGCCTGAAGACGCTGGAGGAGCTGCACCTGACGGGCAACCTGAGCGCCGAGAACAACCGCTTCATCGTCATCGACGGGCTCCGTGAGCTCAAGCGGCTCAAGGTGCTGAGGCTGAAGAGCAATCTGAGCAAGCTGCCGCAGGTGGTCACGGACGTGGGCGTGCACCTGCAGAAACTGTCCATCAACAATGAGGGCACGAAGCTCATTGTGCTCAACAGCCTCAAGAAGATGGCCAACCTGACAGAGCTGGAGCTCATCCGCTGCGACCTGGAGCGCATCCCCCACTCCATCTTCAGCCTCCACAACCTGCAGGAGATCGACCTCAAGGACAACAACCTCAAGACCATTGAGGAGATCATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCTTAAGCTGTGGTACAACCATATCGCCTACATCCCCATCCAGATCGGCAACCTCACCAACCTCGAGCGCCTCTACCTGAACCGCAACAAGATCGAGAAGATCCCCACCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGGACCTCAGCCACAACAACCTGACCTTCCTCCCCGCTGACATCGGCCTCCTGCAGAGCCTCCAGAACTTGGCCGTCACGGCCAACCGGATCGAGGCGCTGCCACCCGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCGCTGCCCTCGCGGGTGGGCGAGCTGACCAGCCTGACCCAGATCGAGCTGCGTGGCAACCGACTGGAGTGCCTGCCTGTGGAGCTGGGCGAGTGCCCGCTGCTCAAGCGCAGTGGCCTGGTGGTGGAGGAGGACCTGTTCAACACCCTGCCCCCTGAGGTGAAGGAGCGGCTCTGGAGGGCTGACAAGGAGCAGGCCTGAGCTCCCATGGCATGGAGCACGGGTGGCCCTGAGTGGGCGGCCTGCAGCCGGACCTCCAGGCAGGCCTCGGGCCCAGGAACCCAGGAGCCCGACGGACCACCAGCCCAGCCTGTCAGCAGGGGCGCTGGAGCTGGGCCGGGCGACAGGACCGCACCTGAGGGGCTGGCCCCTTTTCTCCTCGAGACTCATGCCCCCCAGGGCGGGCGCCTGAGGGGGAGATCAGAGACCTGCAGTCCGTCTCCCAGTGAGCGCAGTATTTGGACAATCAGGGCCTGCTCCCTGGAGGCCATCGCTGCCCCAGAGGCCAAGCTGACGCCAGAGGTCCAGGGACACCTTCTTAGTTCTTGGTATTTATTTTCTCCACCTCCCGCCCTCTCCCTCCAGATAACTTATACATTCCCAAGAAAGGTCAGCTCAGATGTGGGGGGGTGTTAGAGGAAGGGTAGCCATGTTTCCGTTTTCCTTTTCTTGGTGGTGCCGCCAGCATCTAGCGCCCACCCAGACGTGAGCAGAGCGGTCCAGGGTGAACCAGCTGTGGGACGGTCACCCCGGAGGTGCCAGGCTGGGCTCTGGGGGTATGGCCCATGGGAAAGCAGGCCGCCAGCAGAGAAGCCAGGCCTGGGGTTTGCTGCCACAGTTGAGATTTTTTTAAGGAGAAAGAAATTTTTTGAAATTGATGGTTTGGGTATCAAAAAGAAAAAAATAACTTAAAAAAAAAAAGGACACTAAAGGCCAGTGAGTCGGAGTCTCGGGGCAGGACAAGTGTCCTCCCTGAGCAGAGCAGCAGGACACTGAATTAGCTTCCTTCCCCCGGGGAGCAGGCTGCAGGATGCCTCCAGTCCGCGGTGACCTCGGTCCAGGAGTCTGTCTGTTCCTCTCCCCTCCTAGAGCGGGGACTATTTTGTTCTGTTTTTTTGGTGTCTTGTTTTCTTTCTCCTCCATGTATCTTGGCAGGCTCTCGTTTCTGTGGCTGTTGGCCAAAGGGAATGTTCCGGAGCTGCCAAGAAGGGAGGGGACTCGGGTTGGCTCATCCCCAGATGAACGGTGCTCCGCCCCCGCCCCCTCCCCGCTGCACCCTCCGTCCTCCCTGCCCTGACTTTGTGGCAGTGTTAGGAGCCCAGAGGAGCCGCCTCACCCGGACTCTGCTTTCGCACCTTGTGTGTCATGAGTTAGCCCAGTGCCACCACTAGCCTCAGCGGCTGACGTCAGCCCTGTCCCCACCTGGTGACGTGCCACCCCGTCCTTCAGCACGGGACACCTGGAGGCAGGGTCGCCACCGGGGTAGACAGGCCCTCCAGGTTCTGGATAGGTTTCTGTCCCAGGCGCCCAGCCCACGCAGCGCCTGGTGGCGGGAAAGCTAGCTCACTTCATTGAGATCAGTCTCCAGGGTCCCCGCCACCTTCGATCGATCACTTGGACACTAAGGCACGTTCTCGCGTCTCTCGTCTTCACGATTATGTCCATTTGTCCATTTGTGTTTTCCGCGCCGTGTCATCAGATGTAATCCTCAGAAATAATGCACACTAGCCTCTGACAACCATGAAGCAATCCGTTACACATGGGTCTGAACTTGTGGACTCGGTTCAAATAGCAAATAAACCTATAACAAAGTGGCCTTTGGAGGTCTCCATGTCTCTCGGGTCTCTGAGGTCCCTTCAGCCCCATGGTCTCTGAGAAGATAAGGAACTCTGCTTCCCTACCTGCCCCATGAAGCCAGAAGCCCCTCAGAGGCAGCTACCAGCAGACACTCACTGACACAGTCCCGTTGCCTGTCAGGAGTGGATCCTGCAGCCAGGTGTCCTCTGCCGGCCAGAGCCTAGGGTTCCGGCCCTCGTGAGC EMBV3_14204 TTTCAAATTCGGTGCGGATTCGGCGCTCTCCAACCCTGTCCTTCTAAGTAAGCTGGAACC Gene BVV0102_120697 + 1 EMBV3_27724 GK000013.2:23713075-23728841 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40359 TCAGTCCGAGGTCTCTGAAAGCACACCTCATTGATTCCCAGTCAGCTGTCAGATCCTGTA Gene BVV0102_296808 - 1 EMBV3_13503 GK000027.2:37070243-37164685 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20276 TATCAACTTCAACGTGTCGGGCCTGTTCTCAGCACCTGCCCCCCAGGACAAGGTCAGCGA Gene GeneID:100297734|LOC100297734:XM_002687920:127_cdna Constitutive 0 NULL GeneID:100297734 5 GENE LOC100297734 NULL similar to nadrin EMBV3_12433 ATAAGCTAGGAAACATTTGTCAGAAGTTAATTGTCTGAAACATGCAGATAGGAGGAAATG Gene BVT0102_029200 + 1 EMBV3_12947 GK000017.2:64503636-64507771 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077778 TCONS_00077768 TCONS_00077775 TCONS_00077779 TCONS_00077770 TCONS_00077771 TCONS_00077774 TCONS_00077772 TCONS_00077777 TCONS_00077776 TCONS_00077769 TCONS_00077773 1 XLOC_047142 Coding TCONS_00077779 XLOC_047142 Coding Coding MAPKAPK5 17:64505160-64538589 = TSS58030 5217 1 TCONS_00077779_1 472 0.131109833237493 14 0.844352040205815 0.00102320784149717 0.00062916100846521 0.00064265093007178 1.54721883145509e-09 0.000151439739819477 7.3399192004792e-05 0.000169515942959057 0.000138344480274456 3.88423840269652e-08 0.000169464116098311 0.000135362161047111 0.000108169008772423 1.19151053781357e-08 7.66589562596092e-05 3.18587468365078e-20 0.00401636613040125 0.000620548187177666 0.00111502715397492 0.00050948552069791 0.000650036441797018 0.000115063756591561 0.000641748024798595 0.000947605668405957 0.00228968888749527 0.000860896580289149 0.000974054063718857 0.00053659847800046 0.000644841891962277 0.000228223574011569 0.000291292312494575 XM_005217897.1 MAPKAPK5 PREDICTED: Bos taurus mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), transcript variant X1, mRNA. 0.0 9382 99.88 0.999808318957255 NM_139078.2 MAPKAPK5 Homo sapiens mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), transcript variant 2, mRNA. 0.0 2947 89.07 0.427448725321066 TCONS_00077779_1 sp|Q8IW41|MAPK5_HUMAN MAPK5_HUMAN MAP kinase-activated protein kinase 5; 0.0 964 97.87 0.99364406779661 3 coding 0 0 0 0 -0.206512674632024 0.755921040995023 -0.04617048285882 0.360895663417269 GGGAGAAGCAGCGGCGGCGGCGGCGGGCTCGGCCTCGGCTTCGCGGCGGTGCCGGCGGCGAAGGCGGAGGCGCAGGCTCCTCCTCAGGACCTGGCGAACCCGGACCTAAGCGGCGGCCCCGCGAGGCCCCGACACAGCGCCCCTGATCGGGGCCTTCCCCGCCTCGCCCTGCCCCGGGAGCCTGCCTCCCCGGCCGGGGATGAGGCCGGGAGGCGGCCGCGCGGGGCCCAGCACAAAGACTTGTTCCCGGGAGCCGCTGCTGCTGCCGCCACCAGCCTAGAGCCGCCTGCCGAAGCCGAGCCGGCCCCGGGGCCCTCGTCCCCTCAGGTCCCTGGGGGCGGCTGCTGCCCGTCTCCCCGAGACCCAGGGCCCCGAGCGCTGAGCCCCTTGTTCCCCCGGCTGCGGTGGGATCGGGCAGCTGCGCAGCCTCCGCTGCTCCCGGCCTTGCGGGCCCCGCGGAGCATGTCGGAGAGCGATATGGAGAAAGCCATCAAGGAAAGCTCCATTTTAGAAGAATACAATATCAATTGGACTCAGAAGCTGGGAGCTGGAATTAGTGGTCCAGTTAGAGTCTGTGTGAAGAAATCAACGCAAGAACGGTTTGCACTGAAAATTCTTTTTGATCGTCCAAAAGCTAGAAATGAGGTACGTCTGCACATGATGTGTGCCACACACCCAAATATAGTTCAAATTATTGAAGTGTTTGCTAACAGTGTACAGTTTCCTCATGAGTCCAGCCCCAGGGCTCGGCTCTTAATTGTAATGGAGATGATGGAAGGGGGAGAGCTATTTCACAGAATCAGCCAGCACCGGCACTTTACAGAGAAGCAAGCCAGCCAAGTAACAAAGCAGATAGCTTTGGCTCTACAGCACTGTCACTTGTTGAACATCGCCCACAGAGACCTCAAGCCTGAAAATCTGCTCTTCAAGGATAATTCTTTGGATGCCCCAGTGAAGTTGTGTGACTTTGGATTTGCCAAAATTGACCAAGGTGACTTGATGACGCCTCAGTTCACCCCATATTATGTAGCACCTCAGGTACTGGAAGCCCAGAGAAGGCATCAGAAGGAGAAATCTGGCATCATACCTACCTCGCCAACACCCTACACTTACAACAAGAGCTGTGACTTGTGGTCCCTAGGGGTGATTATCTATGTGATGTTGTGTGGATACCCTCCTTTTTACTCCAAACACCATAGCCGGACTATCCCAAAGGATATGCGGAGAAAAATCATGACAGGCAGTTTTGAGTTCCCGGAGGAAGAGTGGAGCCAGATCTCAGAGATGGCCAAAGATGTTGTGAGAAAGCTCTTGAAGGTCAAACCGGAGGAAAGACTTACCATCGAGGGAGTGCTGGATCACCCCTGGCTCAACTCAACTGAGGCCCTGGATAATGTGCTACCCTCTGCTCAACTGATGATGGATAAGGCGGTGGTTGCAGGGATCCAGCAGGCCCACGCAGAACAGTTGGCCAACATGCGGATCCAGGAACTAAAAGTCAGCCTCAAACCCCTGCACTCTGTGAACAACCCCATTCTAAGGAAGAGGAAATTACTTGGCACCAAAGCAAAAGACGGTGTTTACATCCATGACCGTGAGAATGGAGCTGAGGATTCCAATGTTGCCTTGGAAAAGCTCCGCGACGTGATTGCTCAGTGTATCCTCCCCCAGGCTGGTAAAGGAGAGAATGAAGATGAAAAGCTGAATGAAGTAGTGCAGGAAGCTTGGAAGTATAACCGGGAATGCAAACTCCTCAGAGATACTCTGCAAAGCTTCAGCTGGAATGGTCGTGGATTCACCGATAAAGTAGATCGATTAAAACTGGCTGAAATTGTGAAGCAAGTGATAGAAGAGCAAACCACTTCCCACGAATCCCAATAATGACAGCTTCAGACTTTTTTTAAAAAGAATTTGAAAATTTATTCATTAATGTATAATTTTTATGTAAATTAATAAATCATAATTTCATTTCCACACTGCTTAAAGATGCTATATAAATTTAGATACAGGATTTACTAATAGTATATATAGTTCATTTGTTTTAAGAAAAGCTCAGTTCCTAGAGATATACTATTACTTTAGGATTGTTTAGTCATCTGTTGCAAAGCTGACGGTATTGTCAAGCAAGATTGTTTTATTTGTAATAAAGCATACAAAAACCATTTGCCAGTGGTAGGCAAACGACCGACTATTTTGACCTCTCTGTGTAGTAAAGAGCTGAATCAAGTACTGTGGAATCTGGTTTCAGTTGCCCTGTGTATTTCCTCTCTGCACTGTTGGTGGATTAGCTCTGGTGCCAAGAATTTTTTGTGGATCCGTGTTGCAAACTGCCTGATGGAACTCAGAGGGTGCCAACTCCTGTGATGGAAGAGGCAGGGAGCTGAGTCCTCGTATCTCTTCTCCCTAATTCCCTAGGGAAAAGTGGTCCCATTTCTTTATTGTCATATTTGTTAAAAGGTATTGATGTGTTTCTTTAATAGGATTCTCTATTGAGTTTATTCTTTCATGTTCAACCAGAGCTTCAGCCCTGCTACTTCCTTGAAGGTCCTACCTTGCACTCCCCATTTCCTGAAGCCCTCACCAGCTCCATTGCTTCTCACTTCCTTTTATGGAATGATTTTTCTGAGAAAGTTACATATCATAAAAACTGGACTAATGGATATTCATGGGAAGGACTGATGCTGAAGCTGAAGTTCTAATACTTTGGCCACCTGATGCGAAGAGCTGACTCACTGGAAGAGACCCTGATACTGGGAAAGATGGAAGGCAAAAGGAGAAGAAGGTGGCAGAGGATGAGATGCTTGGATAGCATCACCAGCTCAATGGACATGAACTTGGTAAACTCTGAAGGGATAGACTCTGAGGGATAGTGAGGGACAAGGAGGTCTGGTGTGCTGCAGTCCATGGGGGTCACAAAGAGTTGGACATGACTTAGTGACTGAACAACAACAACTGGGTTAGCAGCTAAGATGGTCCAGGTTTCTGTCTTAAAGCTACCTTTTCTCTCTAACGTTTCTGCCTGGGTTTCATGTTGGCATCCCCTGGACTGCATGTATTTTATTTAGCACTCTTCATTTTCAGGAAGCATGGTTTTGGCCCAGAGATCAGATACTTGAATAGAAACAAGGCTCAGTGCTTTTCTACTGTGCTGTTGTGCAATGGGCTTCCATAACAAACCATTTTTATTTATTTTAGTAGTTCTTGGCTGTTGGTTCAGTGTTGGTAAATGGGAGAACTAATAGGCAAACTCCAATTCACAGAGAAGGAAAGGCTCGGTAGCCTCAGTTACTCAGTTTCATCCCACCACATTCTCTTCAATCGAAGTCAACCCCACAGAGCTCACTTACTTTCTAACTCTTCCACTTTCCTAATATGTCTTCAGTATGACATTGGGTTATGTCATGGGTTATGACACACATATGTGTGTCAATGAGTGTAGTAATACACGATAAAAATAATATCTTTTAGGAATTACCTTATACATCAGTTCCCTCATATTTTGGGGAATTTTTAATCCATGGTGTTTTTTGAGGTAAGACTCACTAATCTCAGGTGACTGATAACTCATAAATGGATACCCTGTAAAGAGAATTCAATACTTTTAAACATGGCAAAATCTAACAGGCAGCAGAGAAAAACAAACCAAAAAACTTAGCTGAGAGTTGAATTAAAAGTTGAATTCTGTTTTTCAGTGAAATGCAGTCTTATAAATCACTTTCTGCAATCAGGAAAAACTGCACTTGTTTCTGGAACAACTGAATCCCTGTTATGTTTCTTATTTTATTGCAGACGTTCAGTATTTGTGGGCTTTTCTTGTGGCTCAGCTTGTAAAGAATCTGCCTGCAATGTGGGAGACCTAGGTTTGATCCCTGGGTTGGGAAGAGCCCCTGGAGAAGGGAAAGGCTACCCATTCCAGTATTCTGGCCTGGAGAATTCCATGGATTGTATAGTCCATGGGGTTGCAAAGAGTTGGAAAGAACTAAGTGACTTTCACTTCAGTATTCCCTGGGGTGAGGAAGGCAGTAACTAACTTTGTTACTCTTCTTTTTCTTCAGAGGAACCTTCTAACAGAGGAACTAGTCTACCATTAACTTCTCAAATTTGCTATTTAGGTGTCTTCTAAAGGCTCAGGATGATTTCCCTGTGTAGTGAATTTTAGGTATGATCTAAAAGGGCATCCAAAAGATGCTTCCTTTTACTCTGAACAGAGGTTGCTCATGTTTCTTTAGGCTGAATTAAACTGGCCCCCCAAATGAGTAGAGTGTCCAGAGGGTTATGCTCAAAGTTTTAGAATAGCCTGAAAGTGAAGTGGCTCAGTTGTGTCTGACTCTTTGTGACCCCGTGGACTGTAGCCTACGAGGCTCCTCCTTTGGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCTTTTCCAGGGGGATCTTCCTGACCCAGGGATCAAACCCAGGTCTCTTGCATTGTAGGCAGACGCTTTTACCAACTGAGCCACCAGGGAAGTCCATGGAATACCCTGGAGGGTGTTTAAAAGTGGGTCCTACCTGACACAGAGCTCCATGACAAAACCGGAGGTTCCAAAAGACTCAGCACTGTTTGGTCTTTAAAGTGGGGTTTTGTTTATGGGAAGTTTGTAGACCAGTAGCATATTCTGCTTTAACTTTACCAGTCAGGTTTGGTAATAAAGCAAAATTAACATGTACTGGAAATGAAACAAAATCATCCTTGTCTCTTTTGACCTGTCCCTCTAATGCCTGTATCTGCAGAAAGTTCAAATTCTAAGAACAGTTCTCATAGGCAGGAGGTTTAGAGTCTTCAGTTTTCCTACATGATTTGCCAACCCTCTGTTTACTATATAACCATTACTTATCACTCAAATACCTTTAGATTTTACCACAATTGTTAATCTATTTGATGTGGAACAACATTTGTATTTTTCTGGCTAATGTATTTTATAAGCTAGGAAACACTTGTCAGAAGTTAATTGTCTGAAACATGCAGATAGGAGGAAATGCTTTTTAAAAAAGAAATTTGTTTTTGTATTCATTTGAGATAGAACAAGTTGAAGGAATTATTGAAGTCAAATGATTTAAATCAGATCCTGCGTGTGAATACTTTTGCGTACATGTGTATTGATGAAAATGTTTCAATTTGAGAATTGGAAAACTGGATATTTAATTTTAATTATATTTTTATTTATTTACATAGTA EMBV3_21516 CTCCTAGCTCCTGTCTCCCTGATCCTGGCCTCCTACTGGAATATCATCTCCACTGTGATC Gene GeneID:513635|LOC513635:XM_002693134:25_cdna Constitutive 0 NULL GeneID:513635 15 GENE LOC513635 NULL similar to cOR13N5 olfactory receptor family 13 subfamily N-like EMBV3_32448 TGTGACCAGTGTGTCCACCAGTATCATCGAACGTGTGAAGAGGTCATCAGCAGAAACCGA Gene GeneID:788334|LOC788334:XM_002687703:115_cdna Constitutive 0 NULL GeneID:788334 5 GENE LOC788334 NULL similar to MGC152498 protein EMBV3_10207 GGACTAAATCCACAGGTTAGTTCAGTCAAAACAGGCCAACCCTTTGTGGGCACAGACCCA Gene GeneID:512361|LAPTM5:NM_001046118:103_cdna UTR3_Alt 2 NULL GeneID:512361 2 GENE LAPTM5 HA1520 MGC128686 lysosomal protein transmembrane 5 EMBV3_28378 CTGCACACGAGGAGTCTCAAATACGGAAAACCGGTCTCCCTTACTGATCGAGAGGTGATC Variant GeneID:615712|EXOSC2:NM_001046561:202_cdna 517^693 2 EMBV3_22369 GeneID:615712 11 GENE EXOSC2 MGC137660 exosome component 2 EMBV3_13966 GGTGAGAATGATTGAGGACTGCCATGCTAGCCCTGTGCGGGTTAGTCAGGATGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_11968 AATGCCAATGGTTATGGCTGATCAACACAGACAGTGCAATGCTTGCTGGACAGTGGTGCT Variant GeneID:527565|HACE1:XM_002690144:19_cdna 296^698 2 EMBV3_06734 GeneID:527565 9 GENE HACE1 NULL HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 EMBV3_09946 CAACTGCAGAGCATTAGCTGGTGAGCTGTTTGGGAGGAATGAGAAAGACGCGCAGAGCTA Gene BVV0102_260893 + 0 NULL GK000002.2:128326048-128628041 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43661 CTTCCTCCTTCAGCCCAACAGATGACACCCTCATTCAAAGCAGGACCCAATCCCACAACT Gene GeneID:100125879|C23H6orf153:NM_001105479:179_cdna Constitutive 0 NULL GeneID:100125879 23 GENE C23H6orf153 MGC139601 chromosome 6 open reading frame 153 homolog EMBV3_14077 AGTACTCGAGCAGCTTCTATGCCGGAATTGCTGGAACAACTTTGGAAAGCCAGAGCTGAA Gene GeneID:540987|LOC540987:XM_002689210:116_cdna UTR3_Alt 2 NULL GeneID:540987 7 GENE LOC540987 NULL similar to Uncharacterized protein C5orf5 (GAP-like protein N61) EMBV3_00012 AGACTGGTCCCTTCCAAGGTCAGCCCACCCGTCTGATTAATTTCTGGGAAAGCAAACGAT Gene BVV0102_044576 + 0 NULL GK000003.2:110109949-110118544 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20496 GTTTTGGTGCAAAAGTTGTCCAGTGTCTCTTGTTCCCTTCATTAGAGAACATGCTAGAGG Gene GeneID:538841|ZSWIM6:XM_002696311:6_cdna UTR3_Alt 2 NULL GeneID:538841 20 GENE ZSWIM6 NULL zinc finger, SWIM-type containing 6 EMBV3_34385 CTGTCAAACCAAAGGGAAGCACAAATTAAGGAAATCCTGAGGAAAGAAGCATGGCGTGGC Gene GeneID:100125881|RAB8A:NM_001105481:2_cdna Constitutive 2 NULL GeneID:100125881 7 GENE RAB8A MGC143064 RAB8A, member RAS oncogene family EMBV3_17552 CATCAAGGCGGGCACGGTGGATGAGGACTCGTCAGGCTCCGAATTTCTCTTCTTTAACTT Gene GeneID:538194|CELSR2:XM_002686153:282_cdna Constitutive 0 NULL GeneID:538194 3 GENE CELSR2 NULL cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila) EMBV3_21283 TAGAAGATAGTTTAATGAAGCTGATCTCTTATGTTATACCAGTGGAACAAAAGAGAGGAG Gene GeneID:507986|MOCS2:NM_001014867:64_cdna Constitutive 5 NULL GeneID:507986 20 GENE MOCS2 NULL molybdenum cofactor synthesis 2 EMBV3_40375 CATGATTCAGACAGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGTATATGGGGAGG Gene GeneID:517560|PPWD1:NM_001046231:11_cdna Constitutive 1 NULL GeneID:517560 20 GENE PPWD1 MGC137907 peptidylprolyl isomerase domain and WD repeat containing 1 EMBV3_04146 GATAACCCATCCCTCCTGGTTACAGTTTGAGGCCAGGGACGTGTTGACACCTGAAACAAT Gene BVT0102_144652 + 0 NULL GK000002.2:72250166-72355935 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105537 1 XLOC_062592 Coding TCONS_00105537 XLOC_062592 Coding Coding TMEM185B 2:72352440-72358084 o TSS77854 5644 1 TCONS_00105537_3 350 0.0593550673281361 1 0 0.00100575497171017 0.000269132647800645 0.000543021079363915 0.000378138475897197 0.000402850010907529 0.000238316788762933 0.000363416923223764 0.000287812847978855 0.000670736707205108 9.51114376972839e-05 3.7520317420849e-05 6.96618763886111e-05 0.00013398210180602 0.000926796855226635 0.000156644041346919 0.000800203844483371 5.93103942145067e-05 0.000707771553239766 0.000405366882043068 0.000801319976613951 0.000505978714172068 0.000428522400383049 0.000862820137786159 0.000913542297947384 0.000470185126146699 0.000705739748645171 0.000672603567216521 1.33963145400467e-05 6.71296598469099e-05 1.19916491106421e-106 NM_001077968.1 TMEM185B Bos taurus transmembrane protein 185B (TMEM185B), mRNA. 0.0 3813 100.00 0.3743798724309 NM_024121.2 TMEM185B Homo sapiens transmembrane protein 185B (TMEM185B), mRNA. 0.0 2071 77.80 0.461552090715804 TCONS_00105537_3 sp|Q08DE2|T185B_BOVIN T185A_BOVIN Transmembrane protein 185B; 0.0 706 100.00 0.997142857142857 1 coding 0 0 0 0 -1.09528931572705 0.0085374395235372 -0.0139833687288205 0.762614517665353 CCCGACGCCGCCAGGAAGCGGCCGCCTGAGGTCGCCGCCAGCTCGCTAGCAACGGACCGGCCAGGGAGCCACCAGCGCGCCAGGAACCCGGCCAGAATCCTCTGTCCCTACCCTTCCCGCGCCACACGCAGTAGCTGCTTTCCAAATGGGTACAGAGTGAAGGAGGGCGGCAGGGCTGGCGCTGCTCCCGCTCGCAGACGCCCCGCGCCGCCCGGCCTCTCGGGTAGCGGGGAGAGCGCCAGCGCGGACGCCCCGCCCACCGCCCTTCCGGCCAGGCCACGTGACCGCGCGCGCACGTGTTTCGGCCTCTAGGTGCAGCGGGCCGGAAGCCGGTCCCGGCCGGCGCCCGGCCGCTGTCCACGAAGAGTCGGCTTGGGCTAGCCGGCGAGGCGGCGGGTCCGGGAACGGCGCAGAGGCGGCACCCGCCGGAAGGCAGGCAGCGGCCTGGCCATGAACCCCAGGGGCCTATTCCAGGACTTCAACCCGAGTAAGTTCCTCATCTACGCTTGCCTGCTGCTCTTCTCAGTGCTGCTGCCCCTCCGACTGGACGGCGTCATCCAATGGAGCTACTGGGCCGTGTTCGCCCCCATCTGGTTGTGGAAGCTTCTGGTCCTCGCGGGCGCCTCTGTTGGCGCGGGCGTTTGGGCGCGAAACCCGCGCTACCGCACAGAGGGAGAGGCCTGTGTGGAGTTCAAGGCCATGCTGATCGCCGTGGGCATCCACCTGCTGCTGCTCATGTTCGAGGTCCTGGTCTGCGATCGGGTGGAGCGCGGGACCCACTTCTGGCTGCTGGTCTTCATGCCGCTCTTCTTTGTGTCGCCCGTGTCCGTGGCCGCCTGCGTTTGGGGCTTCCGACACGACCGGTCCCTGGAGCTGGAGATCCTGTGCTCCGTCAACATCCTGCAATTCATCTTCATCGCCCTGAGGCTGGACCGGATCATCCACTGGCCTTGGCTGGTGGTGTTTGTGCCACTGTGGATCCTCATGTCATTCCTTTGCCTGGTAGTCCTCTATTACATCGTTTGGTCCCTCCTGTTCCTGCGCTCCCTGGATGTGGTTGCTGAGCAGCGAAGAACCCACGTGACCATGGCCATCTGCTGGATAACGATCGTGGTGCCGCTGCTCATTTTCGAGGTTCTGCTGGTGCACAGGCTGGATGGACACAACATGTTTTCCTACATCTCCATATTCGTCCCCCTTTGGCTCTCATTAATCACATTAATGGCCACAACGTTTAGGCGAAAAGGGGGCAACCATTGGTGGTTTGGTATTCGCAGAGATTTCTGTCAGTTTCTGCTTGAAATTTTCCCATTTTTAAGAGAATATGGAAACATTTCCTATGATCTACATCATGAAGATAGTGAAGATGCTGAAGAAACATCGGCTCCAGAAGCTCCTAAAATCGCTCCAATGTTTGGAAAGAAGGCCAGGGTGGTGATAACACAGAGCCCTGGGAAATATGTCCCCCCACCCCCCAAGTTAAATATTGACATGCCTGATTAAACCTCTCTTCTGGGGAGTGCTCACAAGTGGAAGAGAAGTCATATATACACAAAATCCACATTACTTTGGCCTCTTTGCCCATCCATGCCAAATCTGGAACTGAAAACAGGCTTCAAAACACCATTTCATGCTTTGAAATTGCTGCCTATCAGTGACTCATCAGTATTCACCAGAGATGCAGGAGGTTCTTTTAGTGTGTAGGTGTGTGTGTGTGCACACGTGCAGTGTGCCTCCATGTGTGAGGAACTTGTTTTCTAGGCTCATGCTTGCAGAGCTAGCTGAGAGCAGTAAATTGAGTTGTTCTGGTAGGTCCTCAAATGGAATAACTACCTGGGGGTTTTTAAAGTGGTACTATACCTATCGAAAGTATTTAGAAAAGTATTTTTATACACTGCTAACGTAAAATTGTATTTCAGATTGTGCCTGCTGTGACATAATAGCAAATGTAAAGAATTCTCTTTCCCACCACTTGCATATAAACCTCATAGTTGTTATTTTCAGTGTTTCCGCTGTTAAAATGGTTTTTCTTTCGGCTTTACTGATACTGGTCTTTAATAGCCTAATTGGTGAATTTTTCTAATGCAGTGAGTCCACCCATATTTATATGACTATTTTAGCAATGTAATATATATTATGTTGAATTCTAGTTCTGTGCAGTGTATTATGTTAAAGGTTTTTTTTTTTTTGTTTTTTTTTTTTAAGTTTGTGAAGATATATATGTCTTCTGCAGATGTTGTTAAAAATTGCTTAAAACATGAATATGTACCTGGTGTGGGATCTTATCAGTTCTAGGCATGAATACAGGGATTGAAGATCCTGAGGATCTTACTAGTCAGGTGTTAGATGATTCTAACAGTTGGGAGGTTTCTCTTGGAAGGGACCACTGTCCTTTGGGAACAGGTGACATGCCCCCATGTGGTATCAGACCCTAAAGTGACACCGTTATTTAGCACCTTGAATTCTTCCACACAGGCAAGAACATCGCTTCAGGAACAATCAAAAGAAGCAGATGGTTTATCTGTTTCTAAGAATCATAGACTCTTAGTTGGCTGTGGTACAATGGTGTTTGTACTTGTCATTGGAAAGCCAGAGAAATTGACCGTAACCTGAAATGGCCAACAGACTCAAATATTATTTTAAGGCCCAACCTTCTTGATCGGGCAGTGACAGGGAAATAATAGCTCAGGTTATTTTTTAAATAAGTAGTTTTTCTAGGTACTGGTGGTACCAGGGAATCAGAAGGGCAAAAAGCATATCCTAGGAGAGTAATGTTCGTCTGACTAAGAACAAATAAATACTTTCAAAAGGAGGTTACCCTTTAAAAAAAAAAAAAGAGGTTAAAAGTAAAAGGAGTACTGATACTATTACCAGGCTCCATATGAACTTAAGTAAACAGTCTACCTGGTGAGAGGACAAGCTTGCAGCAAAAGCCAGCCCTTTGGAACCTGGGTCCCTGGTAGCCTAAGGGCGCCATAGCTCAGTTTAGTCACCTAGGGCTGAACTGAGGTCAGAGCCATACACAGTTGGCTCCTGCCAGCTATCAGGATGTGGGAGGTGGCCTGAGCAACAGTGGGTGTAATGTTTCCTAAGCGAGGATTCATTCGCTTTCTCAACAAATATGTATTAAGGACCTACTCTGAGCCAGACATGTATGTGCAGATCCATTGGAGAGCAGTTCAAAGGTGGCCCCAGCCTACTCACCACCGTAGCTTGCCTATGGGAAAAGCTAGGCCAGCACACACGGGAGGATGCCGCTGGCTCAGGGTGAACTGCACTTGGAACCTCAAGCCCATATTTCTTTCTGGAGCCCTGCCCTGAAGGCCCTTCCACTCCCAAATAATACCTCAAACAGCTTAGCTTACACTTTGGGAAGACCTGGGAGGAAAGGAGGTTACCTGAGGAATCAAAGGGCAGGTTCAGTGGCAGCATTGGGATAACCCATCCCTCCTGGTTACAGTTTGAGGCCAGGGACGTGTTGACACCTGAAACAATCCCTCCTAACCTGGGGGGGTCACCCCCCACACCCTACCCATCTCCTCACTATCCCAGGGTGGCCTGGAGTTGGAAAGCCAGTGCCTAGATGTGATGACACGCTTGCTCACCCATTGGGTCTTCCCCTGTCAAACCACTTTCCCGCCTCAAGACCATATTAAGTAAAAACAGTGGTAATGACAGTTGTAGAAAAGTTGTTTCATCTGTAAAAGTGAATACAGTCTCAGCTCTGCCTGGGGATTTACCTAATTGCCAGTGCGACTCTGACTATCCGCAGTATGTAGCATGTGTTAAATTCTGTAACTAGTTTGTTCTGTAAGATGCTTAGTCAGTTTTTACTGTGAAACATCCTCAAAAATCTCAGTACCCTACCAATTACATGTTTTCTCCCTGGGGCCTTACACTCCAGGCTGCGAGTATGGTCCAGGTCTGTCCCATGAAGCATCCCGCATCCCTGATTCTATTCCAGGTCCCGAAGCAGAATTAGCAGTCCCTGGGAGATGTCCTTTCTCATGGCAGAAGCACAAGAGGCCAAGCCAACAAGCAGACCCGTAGTCCCTACTCACACATGGTGTATGACATACTGTTCTGTTGGTCCAAACACAAGGCTAAAGCCCAACCTCAGGGTGGCCAGTTCAAGCCGAAGGAACGATGACAGTTTGCACCAATGTGAGATAGTTTTGAAGGCTGGAATCACATAATTTGTGGTAGAGTTATTTCCCCCCTAATGTTTTACAAACATTCTGTCATGTTTTAAAGTTCACTGTTTACTATTGTAATAATAGAAGGGAATCTTGGGAGGGAGGAGGGGATTTGAGGTGAGATGAGAAAGACCCTGCATGAAGACTCCTCTAGTGTGGAGGGTTCTAGGGGCTCCACACACAATGGGTTTATAACAGTGCTGGACTCAAGAGAGTTTCCCTGGGGACCCTGCAAGGTGTTCTGGAAGGTCCAGCCTGAGCACAGGGGGACCAGCCAGGTAGGAGGTGCTGGGAAACAAGGAAGAAGTGGAGTCTAGGTGGGCCTCGGCAGCAGGTGAGGGTCAGAGTGGACCCTCCTGTCCAGGCCTCTGACTGGTAGAGGAAGCCATAGGCGCATCCAGGAAGCTCACACGCTGGCAGGAAGTCTGGGACCAAACTCAGCAGGCATGTGTGGATCAAGGGAAGTTGTGCTGCCAGAAACCCCAGCAAGTCTGTACCTCAGGGACCATCTGGTGAGGATGCTGCAGCTGGTGACCCCACCATCTGTCACAAGACGCTGTCACCAGAGTGACAAATGCCACCCGTGTGACCCCTGCTGCTATGAGTACCTCCTCAACCGTCTGCCAAAAGCTCAAGACTCAAGACTCCAGTACCAGAGGGCGGGTGTGATGGGCAATCCTCACGTGTGCATTTGCCCTTCAGGCTCTAGAACTGAGAGGGGAGGTGACCTGGTTCCTGTGGAGCTGGGAGGAGGAGGCTGGCCATACTCAGCCAAAACATGCTCAGTAGAGGATCTGGCCAGAAGAGAAGGGTGTTCAGACACTGGGTGACCAAAGCTAATAACCAAATCAGTCATGTGTCCTTCTTATGAGCTTATGCTTCAAAAAAATGGCTCCCATCTAGCAGGACACAGGTGGCCTCGAGACCAAGCAGGGATCACCCCTCCCCAAAGGAGAAGGGAGACGATGCAGAGCTGCTGCATTAATTCTTTCATCCACCTCTTAATCCACGGTGTTTAGAGATGTCTCTTCCTTTCCTGTCATGTTCTCTGTATATTCTAGAATGTGTGGATTAAAGTGACTACCAGAGCAGGCCTCCAAATGCAGTCCGAGGATCCCAGGGGCCTGCAAGCATCTCCCCTCCTCACAACACTTCTTGGGGATGCAGATTCTCTTCATGCTTCAGCCGAGACGACACACCACAGCAGGTGAGAGGCGGACACAGACCTGAGACGCAGCGCCTTCCACGAAGCCAGATACTAAAGGTTCGCAAAACTGCAAAAACAATGCCACTCCACTACTCACCAGATTTCTTGTTATTTTTCATTTTAAAAAAGTTAACATGTAACGGGCTTTTTCTTTTTAAAAAAATAATATTTTCTAAAGTCATCGTTTTTCCTATCATGGTAAATGTTACTACTATTCACATAAAAGCACCTTGGGGTCCTC TCONS_00105538 s 5' 0 TCONS_00105538 s 5' 0 EMBV3_40050 GAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGAGGAAGGAATCAGGGAATGCAGCAAG Gene BVT0102_256496 + 1 EMBV3_37402 GK000025.2:27675009-27692130 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247122 TCONS_00173460 TCONS_00173459 TCONS_00241066 TCONS_00011558 TCONS_00173458 TCONS_00079314 TCONS_00034471 TCONS_00202228 7 XLOC_151234 XLOC_104361 XLOC_147730 XLOC_007109 XLOC_048199 XLOC_020687 XLOC_123873 Coding TCONS_00241066 XLOC_147730 NonCoding NonCoding - 9:59411083-59412679 - TSS180744 1596 2 TCONS_00241066_3 52 1 0 3.83618306476266e-06 0 0 5.20310846526627e-07 0 0 0 0 0 0.000371602900397673 0.000357601974581728 0.000119595869008014 5.78238343294847e-05 6.3436643798457e-05 0.000423366625732826 0.0434995119042029 0.00915912048134125 0.0335503791342459 0 0 0 0.0119063293741613 0.0103354717804554 0.0203104914748732 0 0 2.62224429621199e-07 0.0015197245229825 0.0010367077463294 0.00443118164624402 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 2e-70 271 86.70 0.143483709273183 0 noncoding ACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGGGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAAAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACATCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGCAGAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAGAAAAATAAAAAGAAAAAAGGAAAAAGTGAAAAAGAAAAAAGGAAAGAAAATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGATCGGAGGAGGAAGGAATCAGGGAATGCAGCAAGATAGAAAAAGAAAAAAAAAAGGAAGTTAGAAAAAGAGACACAGAGAGAAAGAGAAGGAGGAGGAAAGAAAAAGTTAGAGAGAAAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAGAAGAGAAGAGGAAGGAAAAAAGATAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGGAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTTACAAGACACTGTGGCCAGACGCCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCACCTTCCAGGGCCCAAGAGTTCCCCACTTGGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAACAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCCTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAGCCCAATGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTCGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAATAAATAAATAAATAAATGAAAGAGAAAGAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACA TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 EMBV3_11127 AGTGGAGAATCACAAAAAGCAGATGCTCAGGAAAACTGCCAAAGAGAGCCTGGCCCAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28329 TCTACATGGTGACCCTCCTCTACAAACACCGCCAGAGAGTCCAGCATATTCACAGCCTCA Gene GeneID:100139204|BOSTAUV1R404:XM_002695192:872_cdna Constitutive 0 NULL GeneID:100139204 18 GENE BOSTAUV1R404 NULL vomeronasal 1 receptor bosTauV1R404 EMBV3_26622 ATCCGGCTGGATGGGGCCATCCGCATGCAGCCTCCTGGAGTGCTCTACTCCAGTTTGGAA Variant GeneID:281809|HSD17B10:NM_174334:5_cdna 800^846 2 EMBV3_28039 GeneID:281809 X GENE HSD17B10 HADH2 MGC134122 hydroxysteroid (17-beta) dehydrogenase 10 EMBV3_09307 CTACAACTTCAGGTTCGCCAAGTACTACAAGATGGACAACGGCAGTGAGTACCGCACCCT Gene GeneID:530468|P2RX3:XM_002693582:37_cdna Constitutive 0 NULL GeneID:530468 15 GENE P2RX3 NULL purinergic receptor P2X, ligand-gated ion channel, 3 EMBV3_31958 ATCAGCAGGAAGCCTTCGACTTTTAACCTGTTCGTGTTCAGCCCAGACACAGCTGTGGTC Gene GeneID:511050|IDUA:XM_002688446:5_cdna Constitutive 0 NULL GeneID:511050 6 GENE IDUA NULL iduronidase, alpha-L- EMBV3_29168 CCCCTGAGGTTTCCTCTTAGTAATTTTTCATCCACTGACCTCCACCCTGCACCTTGGCCA Gene BVT0102_198782 + 1 EMBV3_42018 GK000007.2:40576683-40583482 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220475 1 XLOC_133792 NonCoding TCONS_00220475 XLOC_133792 NonCoding NonCoding - 7:40578762-40580321 - TSS164473 1559 1 TCONS_00220475_1 88 0.391276459268762 1 0 0 0 5.34226681414871e-05 0 0.000104507383248268 6.8833640003309e-05 2.24440902944648e-05 7.58783668269306e-06 4.55492135121667e-05 0 0 7.64525385680209e-07 3.68092618324183e-06 0 6.29405383395629e-06 0.000220237541007845 0 0 0 0 0 4.7598953224956e-06 0 0.000473152056721554 0.000168878752627951 0 7.5165559835301e-06 1.84833392167561e-05 0 0 XM_005209176.1 N4BP3 PREDICTED: Bos taurus NEDD4 binding protein 3 (N4BP3), transcript 0.0 2812 100.00 0.999358563181527 NM_015111.1 N4BP3 Homo sapiens NEDD4 binding protein 3 (N4BP3), mRNA. 2e-19 102 70.18 0.172546504169339 0 noncoding 0 0 0 0 -0.00909303004813556 0.930678647086624 0.00357963580596232 0.961715741602746 CTCCCTGCACTTGTCTCCCTGCCTTTGGTCCCTCTTGTTCTCAACTCGATAGTGTGTGTCCTCCAGTGGCTCCTTGGGTCCCTTAGCCTATCACTTGAGGCTTCTGACAGTCTTGCCTCCAGGGTCACTGATGGTGGTACCCCTCCTAATCCCAACAGCCCTCTGGGCCCTTGTTCTCCAGGCAGACTCCCCCCGACCATGATGCTCAGATTTTCCCTCCTTAGGGAAGCCTTCCCTGAACTCACACCCTGTCCAGGCAATTCCTTGCTCCCTATGCCCGCAGCCCCTGTTTCCCTCCACCAGCTCTGTCTGTTCCTTTGGAATGGTCAGTTTGCCTCTGTTTTCCACTGGGCTGTGGACATGGCTGGAGCAGGGCCACATCTTCTGTTTTCATCCCCAGAGCCTGCTGTGGTTCCAGCCCAGAAAGCAATGTGGGGGGGGGTGGCTTTGGAGTCGAGAGACTAGACCCCTTCCCTGACTGGCATGGGTTCAAGCTAGAGGTGGTAGGGGGAGGTGGCAAAGGCTCAAATGCCAAGCGTTCATTCACCTTTTGTGCCACCTGGTCAAACCAGGTCTGTGCCAAGCACCACCATTCACTGCACAGTGAAGCATTGAGTGCCTCCTTCGGGGAGGAAGCTGAGGTGGTCAAGGCCTTTGCCCCTGTGGTCCTTTCCAGCGGGTGAGGGAAAGAGACAACACATACGGGTCCATAGTAGTGACTGGGCCAGAAGAGTGCCAGCATTTCAGAGGTGGGGACAGCAAAGGCACCTGCACAGTGGTGAGCAAGCCAGCAGAGCACGCAGAAGGCAGAGGGAGTCCATCTGGGGGACTGAGAGTAGATTTCTTTGAAACTGGTTGGCTGTGGGTATTAGGGAAACATTTCCCAAAGAGGGTATAGACCCTACAGTGACTATTCAGATTGCAATAATCCACCATTCTAGTAGGTGGGGGCTTAGCCGTCTATATTGGGTTCAGAAAAAAATAACGTGCTATTTCTTGTAGAAAAAAACAAAAAATATGAAATAATGCAGTAAAAACAAAAAGTGAAATATGTTATGAGAGGTGAAGTTTGAACGACAGGAGTTCAGAGGAGAACTGGCTCACTTATCACTCCAGGTGGTGGGGTGGGGCGAGGGGACAAAGGTTGACCAAACTCTGGGCAGGCACTTCCAAGCTTTCTGACTGCACCTTCTGACTGTGTGCTTCCTTGTGCAGCCAGTTCTAGCAAGAATCCTGCTAAGTTAGGTTAGCCAGAGTCTCCCATCTTCTATGTCTGAACACCCTCCGTATTCTAATCTGGTTCCTCCACCTGCAGCATCTCCCACATTATGTCTGGCCACTCTGGCCTGCCTTCATTGAGAATTCTCTGCAGTCATTTAGCCAGTTCCCCCTGCCCCCTGAGGTTTCCTCTTAGTAATTTTTCATCCACTGACCTCCACCCTGCACCTTGGCCATGAAATATACTTTTCCTTGTATTTGGAATTGAGGCCACTCTCTGACCCTTACATAAAATCCCATTCCAGTAGCCTCCACTGAATAAAGTCTTCCTTACCACTCTA TCONS_00212938 . 3' 1028 TCONS_00212938 . 3' 2586 EMBV3_16089 GTGAAGACTTACGATCCTTCTGGTGACTCCACATTACCAACCTATTCTAAAAAACGCAAG Gene GeneID:507155|NOP58:XM_002685512:46_cdna Constitutive 0 NULL GeneID:507155 2 GENE NOP58 NOP5/NOP58 NOP58 ribonucleoprotein homolog (yeast) EMBV3_09057 CTCCCGCTTCAACGAGGACCGAGACTTTCAGGGTAATCACTTTGATCAATATGAAGAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10854 GGTGGAAATGACTTCTTCAGGTGGAAAAGCTGGGTATATCATCAGTCTGGAGGGGAGTGG Gene GeneID:404548|SEC16B:NM_206971:34_cdna Constitutive 0 NULL GeneID:404548 16 GENE SEC16B LZTR2 Rgpr SEC16 homolog B (S. cerevisiae) EMBV3_27036 CTCCCAGCGCTCCCCGGCCCCCCTTGTTTAATTTGCATCACAATATGTTGAATCTCAGGT Gene GeneID:768228|CPLX1:NM_001078103:3_cdna Constitutive 0 NULL GeneID:768228 6 GENE CPLX1 MGC139514 complexin 1 EMBV3_12185 GGGGTGGGGGTGATGGTGAGGATCTGTAGAGGTATAAAATTTCTGGACGAACAGGAGTAC Gene BVV0102_031100 - 1 EMBV3_43504 GK000018.2:35474391-35476832 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082939 TCONS_00082940 TCONS_00082944 TCONS_00082942 TCONS_00082943 TCONS_00082941 1 XLOC_051146 Coding TCONS_00082944 XLOC_051146 Coding Coding THAP11 18:35472678-35476344 o TSS62459 3530 1 TCONS_00082944_2 303 0.0144475920679887 2 0.0373806275579809 0.000153732498556308 0.000149646684802143 0.000559358103293813 3.30443733139299e-05 6.88464334643497e-05 4.82612593725508e-05 0.000167499433486162 0.000912566772486645 0.000669824543712098 4.83300315597192e-05 2.35258922113263e-05 3.97301076067039e-06 2.90160470435711e-10 9.42339957421927e-05 0.000109357974649696 5.00741498721556e-05 1.37111988090232e-09 0.00023243949061334 0.00030750274738657 0.000139374536833939 4.94283839143019e-05 2.6540491213342e-25 4.94477074364471e-05 5.39346198437629e-05 0.00025810369445246 0.000109742388780916 2.56126684893393e-09 8.18926775573692e-82 4.4769584515251e-06 0.000114375592610847 NM_001104994.1 THAP11 Bos taurus THAP domain containing 11 (THAP11), mRNA. 0.0 2336 100.00 0.36657223796034 NM_020457.2 THAP11 Homo sapiens THAP domain containing 11 (THAP11), mRNA. 0.0 1595 85.77 0.377053824362606 TCONS_00082944_2 sp|A5PKF5|THA11_BOVIN THA11_BOVIN THAP domain-containing protein 11; 0.0 622 100.00 0.996699669966997 1 coding GTCGAGGGGCGGGCGGCGGCAGACAGACCCGACCGTCGAAAAGCGCAGGAGGCCGGTGGGCCGGGTCGGGCCGCGCGGCGCAGCCATGCCTGGATTTACGTGCTGCGTGCCGGGCTGCTACAACAACTCGCACCGGGACAAGGCGTTGCACTTCTACACGTTTCCCAAGGACGCTGAGCTGCGGCGCCTCTGGCTCAAGAATGTGTCCCGTGCCGGCGTCAGCGGGTGCTTCTCCACCTTCCAGCCCACCACGGGCCACCGTCTCTGCAGCGTTCACTTCCAGGGCGGCCGCAAAACCTACACTGTGCGAGTCCCCACCATCTTCCCACTGCGCGGCGTAAACGAGCGCAAAGTAGCACGCAGACCCGCGGGGGCCGCAGCCGCCCGCCGCAGGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCCGTCGCCGTCCGCTTCCACTGCCCAGACCACTCAGCTGCAGCCTAACCTGGTATCTGCTTCTGCGGCTGTGCTCCTCACCCTTCAGGCCGCTGTAGACAGCAGCCAGGCTCCAGGAACCGTGCCGCCGGTGCCCACCACTCCCACGGGAGAAGACGTTAAGCCCATCGACCTGACGGTGCAAGTGGAGTTCGCGGCCGCAGAGGGCGCAGCCGCCGCCGCCGCTGCGTCGGAGCTAGAGGCTGCTACAGCAGGGCTGGAGGCCGCCGAGTGCCCCATGGGCCCACAGTTGGTGGTGGTGGGCGAAGAGGGCTTCCCTGATACTGGCTCCGACCACTCGTACTCGTTGTCGTCAGGCACCACGGAGGAGGAGCTCTTGCGCAAGCTGAACGAGCAGCGGGACATCCTGGCGCTAATGGAAGTGAAGATGAAAGAGATGAAGGGCAGCATTCGTCACCTGCGTCTCACCGAGGCCAAGCTCCGCGAAGAACTTCGCGAGAAGGATCGGCTGCTGGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTAAACGAGTCCCTTTTTGGCCCTCCGGACTCCCAGATCCCTGCCAGCTTAGAGGGACCTGAGGCCACCGTTGTTGAACTCCCTCATACTCCTGGGGCACTGTTTGACAGTACTGAGGCTTAGGGCAGCTGGACTCTTTTGCTGGTGACCTAGTACCCTCTCATTTCCTCCTGAAGCAACGTCCTGAAGTCTGAGACTGCACTAGGGACACCAGCGGTTATGACTTTGTCTACCCATCCACACCTTCACTCCCTAACCCCAAGTTTATATTGCAGGTTCTGGTTAAGCAGAGGCTTCAGAACCACTGAACTTGAAACTTACCCCATAGGGATGCAGGTGCAGCCTGTGATTCTGATGGGGACTGGCAGATCTGTGCCTCAGCTTCCTAGGACTTCCCTCCCAGGAGGCCATCTACAAGGGGATCTAGGTGACCTGTTGATGGAAATCCAGCCTGCCAGGGACTTAGGTCTATCCTGTTATGTTTGCTACTGGTTACAAATTCTATTTTCTGTACAATTAGTCAGACTAAAGTTTTCACTGTGTTTGTTTGGCAAAACGAATTAAACAGAAAATAAGGTTTTTATTTGGGTCTCGCCATTTTATTTTTATAAGGACTCAGCTCAGGATCCTTGAAACGTGGGCAGATGGACTTCCTGATAGGCCTCCCCCTTCTCCGCCTTGGTCTCGAGGACAGGCTGACCCAGGGAGTAGAGATGCTTCAGTGACCAGGTTTCTCCATAAAGGGGCTCTAACCCTCATAAGGTCTTCTCAGAGTTCCAACGCATACTGAAGAGTTTGGAAATTGCACCAAATGGTCCTGGTTTGCCCATGGGTTAGCTCCCTGTGTGCTTTCAACTGGGGGAAGAATCAACTGAGAACTAAGCTGAATTGTGGCACTTCCTGGGGGTTTTGAATTCCTTAAGAATTTTCAGCTGGAATTGAATTTTGCTCACTATTCTCCCTTAGGCCTAGTACAGTGTCTGGCACACATGGGCATACAGTTACTTACATCAGTGAAGACCACAGCTGGAGCCAGCCATGGGTTCTTACAAGGAATACGGATACCTTTGAACTTGGTGCACTTTCATTGTGAAGGAGGTGGATCCTCAGAGGAATTTAAGGATGAGTTGGGATCTGTCATCTCTTGACTCATTTTCTTCGCTGTTAGCATCTTTATTTAGACTGGATGTTGTAGTGACAAGGTGACATTTTTATCTGTGGTTCCAAGTCATTTAGCCGAAAGCTGGCAACAAATGCCTTTAAAGCTAGCAGTGTTTAACATGGGTATTGGGGCACAAATGATACTTACTGGGCTCCATAAAACATGATTCTTTTCTCTGTTACTTATGGAAAAAGCCACTTACCTGGGGGCTTTCCCTGTAGTTTCGAACTAGAATGACTCTAAAATATCCCTCCAGTCTCTGCTGTCCTTCTGACCCCTTGGCATTGACAAGTGTCTGTTGGGGAGGAGAAGTGGGAGATAGGTTGTGCAGGTGCCTAGTTGGGGAAAGGACTGTATGTCTCCCTTCCTGGGGTTAGGTCTGGCTGGTCATAAGGTGGTGGAAGCACAGTAGTACCCTTCCAGGCCAGCAGGGACTGTAGCCCTTTATGGGCAGGTGTTGGGTCACTCACTCCGCTGTCCCCACCCGCCTTCATTAGGAGTGAGGATTTTCCCAGGCTCCAGCCATGCTCCTTAGTGTATCATTTAGCTCCTGTTTGCTGAAGGGATTTAAGACTTTCAACTTTGGGTCTCTTGAACCTCTCAGCGGCACTCCCAGGACAGAGTGAGAAGAGCCAAACTGGTCAGGATTCGCTAGTGTCTGGATATGATGAGCACACAGTCTCTGGGGTGTTTTATCTTCTAGAAGGGAGGAGAACAGCTCAGAGCAAGGGAGGCCCTAGATACACCACAAGCAGGGCAATGCAGTCTCCCGGACTGAGTAATAAGAGAAGAATCTAGTCAGGCAAAATAATACAGATCTGGGATTTAATGAACAGAAGCCTGGTCTGGTCTTACCAGCCATCCCCAGGTGGAGGGGTGGGGGTGATGGTGAGGATCTGTAAAGGTATAAAATTTCTGGACGAACAGGAGTACTGAGCCATCTCTGACTAGGAGAAACCTTGTCTCTATAAACTTAACCTGTGGTCCCCCGGCTTAGCTGCAGAATCCCAGCAGGCCTGACCGAGACACACGTTACTTCAAATGTTTGTGTTACCCAGGAAACGACAACGAAAATGGGCTTTGAAAGAAAAGAGTAATGGGCGGGAGGGAGATTATGGACAATTTAATCGCTTAAATCACGGGGAAGGTTTGGGCGCACCAGTTGTTTATCTTTTTTCATTAATAAAACCAAGATTCTTAGCTGCCCTGCCTGATGCAAAACCCAACAACAAAAAACTTGTGAGAATGCTTTGTACACCCTAACTGCAGAAATCTAAGAGTAAGCTTGTTTCCAGCCCAGGAAAGCCTCGCTTGCTTGAAACCAGCTTTGGGTCCAACTTGCACCCGATAGGGCGCAAGAATGTTGGGACAACAG TCONS_00082945 TCONS_00082945 s 5' 0 TCONS_00082945 TCONS_00082945 s 5' 0 EMBV3_03978 TGCTCTCAAAAGAACCGGGCAAAAAGATGCTGCTTTGGGGAGAAGGGCAGAAGCATAAGC Gene BVV0101_077856 + 0 NULL GK000009.2:32562774-32758226 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25144 GAGGGGGAGAGGGAAGCATCTGCCTAGAGGAGAATGTTTTGACTTGGATATTTATGGTCT Gene GeneID:100296226|LOC100296226:XM_002697779:346_cdna UTR3_Alt 1 NULL GeneID:100296226 24 GENE LOC100296226 NULL similar to phorbol-12-myristate-13-acetate-induced protein 1 EMBV3_11850 TGTTGCGTCGCCCGCACTCGCCAAGCTCAGGCTGTTTCTGATGCTTGGAAGCTATCCTTT Variant GeneID:514445|UBOX5:NM_001075669:1057_cdna 77^274 2 EMBV3_34505 GeneID:514445 13 GENE UBOX5 NULL U-box domain containing 5 EMBV3_30443 TGCTGCCCAGAGAAAGAACTGACTTGAACACGGTCGAGAAGGCCCTGACCTACGAGAAAT Gene GeneID:782894|LOC782894:XM_002697608:97_cdna Constitutive 0 NULL GeneID:782894 23 GENE LOC782894 NULL similar to thrombin inhibitor EMBV3_20532 GTGGACAGGTTCAACAGGGACATTGAGTTCATGATCGGCCACAAGCCCAACATCTTCTGG Gene GeneID:100337416|LOC100337416:XM_002696466:93_cdna Constitutive 0 NULL GeneID:100337416 20 GENE LOC100337416 NULL sodium-dependent neutral amino acid transporter B(0)AT3-like EMBV3_23956 GAGAGCAGAATCTAGTCCCCATTTTCCACAGTCCCCACCATTGCCTGTTGCACTCTCCTA Gene BVT0102_155242 + 0 NULL GK000007.2:19747862-19765775 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219438 1 XLOC_132757 NonCoding TCONS_00219438 XLOC_132757 NonCoding NonCoding - 7:19764513-19764865 - TSS163436 352 1 TCONS_00219438_1 91 0.417613636363636 1 0 0 0 0 0 0 0 0 0 2.24151172273743e-05 3.50667046913872e-05 0 0 2.44541101661975e-05 4.00908572720747e-05 0 0.000600263624542383 0 0 0 0 0 0 0.00114675721341818 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0399833384113606 0.786316416769401 0.00279217754120062 0.958769731561412 ACTCTTTAATGTTTACTGACTGTTATTTATTGAGTCTATAATTTCTAAAACTGCTATTTTTATCAGCCCCATTTTTCTGATGAGGAGACTGAGGCACAAAGTTAAGGACAATGTTCTCAGTTGGTCAGCAGAAGTGCTGGGATTCCAAACTGGCAGGCTGAGTCCACAGCCCAGAGGTGCCTGTGCTGCACCAAGGCTCTTCCAGGAACAGGGAGCTTTAGGAGAGTGCAACAGGCAATGGTGGGGACTGTGGAAAATGGGGACTAGATTCTGCTCTCCTTGGGCTGTTTGTTCTCCACTTCCCTGGGATAAAATCCCCAAGCCCTCCCCAAAGCCTAGAGGGCCCTGCATG TCONS_00212294 TCONS_00212295 TCONS_00212296 TCONS_00212297 . 5' 911 TCONS_00212294 TCONS_00212295 TCONS_00212296 TCONS_00212297 . 5' 911 EMBV3_06919 CCTCGCCGTGCGGCTCGCGTGCCCAGCAGGATACGAGAAGATGAATTGCTCTGGACTTCA Variant GeneID:617598|TMEM20:NM_001076470:252_cdna 246^426 1 EMBV3_35264 GeneID:617598 26 GENE TMEM20 MGC133623 transmembrane protein 20 EMBV3_41988 CGCCTGGGAGTCGTGAGACGCCGGAATTCGTGTCTCCAGAGCGCTACAGCTATGGCTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34106 CCACTCAGTTGGTCCATTTAAGGCAAGGACTCCAAAGGAGATTATGGCACGAGACAGAAG Gene GeneID:784749|ANKRD27:NM_001102532:799_cdna UTR3_Alt 2 NULL GeneID:784749 18 GENE ANKRD27 MGC166150 ankyrin repeat domain 27 (VPS9 domain) EMBV3_33132 TGCATCAGAGAGTTGGTCAGTGGGCTGTTTTATCATGGGTGATTAGATTCTGTTGCCCCC Gene GeneID:613445|MREG:XM_002685566:4_cdna Constitutive 0 NULL GeneID:613445 2 GENE MREG NULL melanoregulin EMBV3_07992 AAATCACCCGGCTTCCTCAGACCCCCGCTTCCAGCCCTTAACAACTCAACAAGCCAAAAA Gene GeneID:538337|CDKL5:XM_002700379:37_cdna Constitutive 0 NULL GeneID:538337 X GENE CDKL5 NULL cyclin-dependent kinase-like 5 EMBV3_33593 CAGGTAAGACCCTATTTAAGCCAAAATCCACAGCCGGATGGTGCGGTCGTTGCTGAGGTA Gene BVV0101_017571 - 1 EMBV3_38905 GK000010.2:11555271-11563977 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29351 TAAGGACGTACTTATAGCACAGGTAACTCTACTCAGTACTCTGTAATGTCCTATAGGGAA Gene BVV0102_026263 + 0 NULL GK000030.2:128825164-128884988 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33623 TTTGGTGATACAACCACTTCCCTAGCAGCAAACCCAGATGCCACCACAATCAGCATCGAG Gene GeneID:511748|YIPF1:XM_002686382:193_cdna Constitutive 1 NULL GeneID:511748 3 GENE YIPF1 NULL Yip1 domain family, member 1 EMBV3_10843 AAACCCAGGTTTCCAATTGAGATTGATGGATGAGCTTTTCCATGGAGTAAACTCCTGAGC Gene GeneID:613426|TMEM167B:NM_001128503:185_cdna UTR3_Alt 1 NULL GeneID:613426 3 GENE TMEM167B C1orf119 C3H1orf119 MGC139618 transmembrane protein 167B EMBV3_08316 CCGCAGCACGTGTCCCCTTAATGAAAACCTCTACCTAATCAGCCAATGACCCAGTAAACC Gene BVT0102_443822 - 1 EMBV3_21256 GK000009.2:75519233-75549282 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31275 GTGCCATTCAGGACCACAGTGTTCTCGGAGGAGAAGATGACGCCCACCTTCCAGCTGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41449 GGGTGTAAAGAATTCTATGATGGGAAAGAATTCTGCTGTCTATAGTGCTTTCCTTCAATG Gene GeneID:538551|EBAG9:NM_001078015:38_cdna Constitutive 2 NULL GeneID:538551 14 GENE EBAG9 NULL estrogen receptor binding site associated, antigen, 9 EMBV3_41212 ATAACACTATATTTATTTTTGGGTTTGGCCAGGGAGGCGCAGGGACATGGGGCAAGCCAG Gene GeneID:507834|ESRRA:XM_002699331:182_cdna Constitutive 0 NULL GeneID:507834 29 GENE ESRRA NULL estrogen-related receptor alpha EMBV3_15531 GCCGTCCCCTGCCAGTCACTTTCCACCGAGGCCAAAGGCAGGATTGTGGTAATGCCAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35967 GCCTATGCCTGGCTGGTTCCTCTCGCACTCTGGGGTTTCCTTGTATGGAGAAACAGTAAA Gene GeneID:100337451|LOC100337451:XM_002686383:196_cdna Constitutive 0 NULL GeneID:100337451 3 GENE LOC100337451 NULL Yip1 domain family, member 1-like EMBV3_13906 CAGTCCCACACAGAACTTCTTCTGACACTAAACATACAAGTAGCTGTTGCATGCTTGCCC Gene BVV0102_291057 + 1 EMBV3_39830 GK000002.2:105087270-105138333 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24056 GGGTGTGTGTTCTCATACTTCTGGTGGCCAGGACTGTTGGTTTTCTGCACTCATTGGTTC Gene GeneID:100140536|LOC100140536:XM_002707895:25_cdna Constitutive 0 NULL GeneID:100140536 19 GENE LOC100140536 NULL similar to olfactory receptor 1234 EMBV3_38589 GAGGGCATTTTGGATGTTTGCAGGGGCATTCGTGGCTTCCACAATAAGACTGGCTACTGT Gene BVT0102_125795 - 1 EMBV3_05573 GK000003.2:37436151-38166345 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176991 1 XLOC_106765 NonCoding TCONS_00176991 XLOC_106765 NonCoding NonCoding - 3:37904669-37906231 - TSS131750 1562 4 TCONS_00176991_4 76 0.411651728553137 1 0 0.000587953304319966 0.000764461631257682 0.000313008980026778 4.25308470388113e-05 0.0003977346279196 0.000151142962977388 2.61344159169111e-05 3.78662477187732e-05 0.000712233209532552 0 4.39665454101986e-06 0 3.67385667493633e-06 0 0 0 0 0 0.00110333881938218 0.000616934639758066 0.000413801083367899 0 0.000264296276376585 1.07328020268544e-05 0.000385901656762989 0.00115695409687016 0.000472633319288561 7.99406708504916e-05 8.39145033275642e-05 0 NM_001130765.1 SP140L Bos taurus SP140 nuclear body protein-like (SP140L), mRNA. 2e-126 457 94.26 0.188860435339309 0 noncoding 0 0 0 0 0.127796711693655 0.479095818982668 -0.00619606322398064 0.902287236727558 TCACAATATGATTTACTTTATTTAGCACATTGGATGTTTCCTTTTTCAGAAAGCAAATATATCACTAGCCTAATGTATATAATACAAAGAAAACTGAAGCAAATCTTACAAGCAAATGAAACTACCATAACAGATTATAGTCTAAGTCAACTCTATTCAACAGTGGTAGTACCACTACCTAGAGGGCATTTTGGATGTTTGCAGGGGCATTCGTGGCTTCCACAATAAGACTGGCTACTGTAACTCACTATTAAAGGGAGAGAACAGAGATGTTAGATTTGCTGTGTACTGTCCATTGTCAGTTAACATCCATTCCCATTCCCACTTTCTGTACCTCTCCCACTGTTGGCCCTCTCCCAGTATAGCAGGCATTGGAAAGATTAAATCTACAGATTTCCTTACAGATGAATTTGGATGTTTTAATTTAGATTAATCTAATGAAATAATCTTGCTACATATTTGGAAGGTAGACATAAAATGAATGCCATTTTCCTGTGCCTACTGCCATTTGCTGTGATTTAAGCAAGTTGTCATTTTCCTGCATCAGGTACTATTGTCTAAAGGTTTCTGTTAAGAAACAAGGAATGTAGTTCTGTTCCTCATATGACTCTCTGGGGTCTGCTGTGGCCCTGCTGTCGTTCACCAACCTAGGTGAGCATGGCTCCAGTGGCAGCCTTGGGAATAGGAACGCTATGATTGGAAATTATAAAATTTCCTAGGAAACATTTTGATAGGCCCAAGCTAGAACTTCAACTGTTCTGCAACCTTTCCCATAATTTTGTAAACTATTAATTCCCTATATTAAATTCCTTAATGTTTATAATACTCGGGGTAACTATAATTGCTTATCAGTGCCATGCGTGCATGCTCAGTCGCTCAGTCATGTCCACTCTTTGGGACCCCATGGATTACAGCCCACCAGGCTTCTCTGTCCATGGGATTTCTGTGGCAAGAACACTAGAGTGGGTTGCCATTTCCTTTTCCAGGGGATCTTCCTGACCCAGGGATAAAAACAAGTCTCTTGCATCTCTTATGCTGGCAGGCAAATTCTTTACCACACTTCCACCTAGGAAGCCCAATACTGAACCTTAATTCCTTCATATTACATATAGCAATGTTCATCATGGTTTATAGAATGAAGGATTCTTCTGTATTCCATGAGATATCTGGATAGTATCCAAGGCATTCATTTTACTTTTTAATATGTTTATATTTGATTCATCAGTTCAGTTCAGTTCAGTTGCTCAGTCATGTCCGATTCTTTGTGACCTCATGAATCACAGCAGGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTGAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTCCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAACCCTGGGGCTGATCTGAATCCCTAGAAAATAAAAATATAATACATATTGACATAAAGCAA TCONS_00173091 . 3' 1359638 TCONS_00173091 . 3' 1361199 EMBV3_33831 TCCCTCCTGTGGATAACTAGAGTCAGCAGCAGTTGGAAGCAAATGGCAAGGACTTGGATG Gene GeneID:767972|MGC134040:NM_001077037:169_cdna Constitutive 0 NULL GeneID:767972 3 GENE MGC134040 NULL hypothetical protein MGC134040 EMBV3_05970 TTGTAAGGTCTCTTGTGCGTGGTTCAGCGTTTTTGGCTTCACACTGACCTTTCCATGGGC Gene GeneID:100125308|KCTD5:NM_001103341:4_cdna Constitutive 0 NULL GeneID:100125308 25 GENE KCTD5 MGC160111 potassium channel tetramerisation domain containing 5 EMBV3_34172 CCTGGATCTCTGGAAGAATAAACCACCCAAGGGCCAGACCCCCAGTGATAAAAGCTCCAT Gene GeneID:507606|IQCC:NM_001024492:73_cdna Constitutive 0 NULL GeneID:507606 2 GENE IQCC MGC134283 IQ motif containing C EMBV3_31042 TTGGAGGTACTGACCGATGCTGCCGCCAGGATCGAACGCCTGCGAGAAGAGGGTTCCCGG Variant GeneID:524795|DNAJC17:NM_001046276:166_cdna 220^393 3 EMBV3_17978 GeneID:524795 10 GENE DNAJC17 MGC137242 DnaJ (Hsp40) homolog, subfamily C, member 17 EMBV3_35366 AGCCACCACGGTTGCCTTTTCAAGAACGGGGGAGTATTTTGCCTCTGGCGGTTCAGATGA Gene GeneID:534489|WDR51A:NM_001038560:241_cdna Constitutive 0 NULL GeneID:534489 22 GENE WDR51A MGC134230 WD repeat domain 51A EMBV3_35036 TGCCAAAAGCGTTGAGCAAATGCTCGGCCTGGTCATCGAACCGGCTGAAATCGAGCAACT Gene GeneID:100337059|LOC100337059:XM_002683922:3_cdna Constitutive 0 NULL GeneID:100337059 Un GENE LOC100337059 NULL phenylalanyl-tRNA synthetase beta chain, putative-like EMBV3_07946 AGGGACCAGGTTCTCCGGGCGCTGGTGAAGGAGGCAGCAAGAGGTTTCTTTGTGAGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32829 ACGTGTGACAAGACGGATTGGCTGGATGGCAAGCATGTAGTGTTTGGGGAGATCACGGAT Gene GeneID:787681|PPIE:NM_001098161:337_cdna UTR3_Alt 3 NULL GeneID:787681 3 GENE PPIE NULL peptidylprolyl isomerase E (cyclophilin E) EMBV3_23097 GGAAGTGTTTGGGCCATGTTTACCGGATGCAAAGAGTTGTCTTGATTTTGAAGCCCTGGC Gene GeneID:524650|LOC524650:NM_001040545:48_cdna Constitutive 0 NULL GeneID:524650 4 GENE LOC524650 MGC133513 similar to EF hand calcium binding domain 1 EMBV3_30777 GATTTACAGGAAGAAGCCTGTGCAGGTTCTGAAGCCGCCTCAGCCCAAGGCTAATCTCAT Gene GeneID:513234|OSAP:NM_001166611:17_cdna Constitutive 0 NULL GeneID:513234 17 GENE OSAP NULL ovary-specific acidic protein EMBV3_14467 CTGTCTGCAAGGGGCCTGCTCACCATTGCAGGGGTTTAAGCAGAGGGAGTGACAGTGTTT Gene BVT0102_244550 + 0 NULL GK000025.2:1747345-1753320 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27705 TCTTGCATGAAGCCCTATCCAGAGTCTCCTGAGAACACACCTCCTCCTACACCAACAGCT Gene GeneID:618133|SUPT3H:NM_001105008:365_cdna Constitutive 1 NULL GeneID:618133 23 GENE SUPT3H NULL suppressor of Ty 3 homolog (S. cerevisiae) EMBV3_25526 ATGATTGCTCTGCTTATACTGGTTGGACAGGTTTTTAAGGAGGAGAAGTACCTGAAGGAC Variant GeneID:541142|LANCL2:NM_001102256:44_cdna 121^806 3 EMBV3_42983 GeneID:541142 22 GENE LANCL2 MGC148337 LanC lantibiotic synthetase component C-like 2 (bacterial) EMBV3_22113 TCATGCCTGATCCGTCCAAATCAGCTCCCGCACCCAAGAAGGGCTCCAAAAAAGCTGTTA Gene GeneID:520120|LOC520120:XM_002688488:67_cdna Constitutive 0 NULL GeneID:520120 7 GENE LOC520120 NULL similar to histone cluster 3, H2bb EMBV3_04619 GCGTGTCCCTCTGGTGCGGTTCACCACGGTTGTATTTAAGTGATTGTGCGAGTCGTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42449 TTCCGATGGTGTCTCCACTCTATCTGCTCTGACCTTAAACGGAGTTTGGGCTTTGTCTCC Gene GeneID:100337447|LOC100337447:XM_002698874:483_cdna Constitutive 0 NULL GeneID:100337447 28 GENE LOC100337447 NULL phospholipase A2, group XIIA-like EMBV3_20341 AGGCTGAGACCAGAGTCTTTGCCCCACGGGAAGAGAGCGTTTTGTTCTGCTTCTGAATTA Gene GeneID:613713|NKX2-1:XM_002696708:103_cdna UTR3_Alt 2 NULL GeneID:613713 21 GENE NKX2-1 NULL NK2 homeobox 1 EMBV3_24812 TCCACACACGTCTTCCGCTTCTACCGGGAATCACTACAGAGGCGTTACTCCAAGAGCTGA Gene GeneID:100138962|EXOSC5:XM_002694995:199_cdna Constitutive 0 NULL GeneID:100138962 18 GENE EXOSC5 NULL exosome component 5 EMBV3_16594 GAACGAGATGGTGCTGTCAAGGCTATGGAAGAAATGAATGGCAAAGACTTGGAGGGAGAA Gene GeneID:511763|SYNCRIP:XM_002690201:60_cdna UTR3_Alt 1 NULL GeneID:511763 9 GENE SYNCRIP NULL synaptotagmin binding, cytoplasmic RNA interacting protein EMBV3_04189 TGTAACTTCCGAGGTGCCCTTTTCCAAAAGATTAATCAAGATGAAGAAGAGGAGGAAGAT Variant GeneID:616065|LOC616065:XM_002694113:439_cdna 286^391 1 EMBV3_30694 GeneID:616065 16 GENE LOC616065 NULL similar to 60S ribosomal protein L22 (Heparin binding protein HBp15) EMBV3_06627 CCTTCAATGGACGGAACCCTGGCAAACTTGGCTTAAGATGTTGGTTAAGTTGTGAGGAAG Gene BVT0102_019066 + 0 NULL GK000009.2:22192342-22261983 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00239274 1 XLOC_145940 NonCoding TCONS_00239274 XLOC_145940 NonCoding NonCoding - 9:22221646-22222508 - TSS178952 862 3 TCONS_00239274_1 40 0.0638051044083527 1 0 0 0 0 0 0 0 0 0.000198986860214852 0 1.90928089748541e-05 0.00149514195836255 8.29625240199581e-06 3.3286328448428e-06 0 0 0 0 0 1.66378941274776e-05 0 0 0 0 0 0 0 0 0.000200571657279818 2.25271574338263e-05 0 0 noncoding 0 0 0 0 -0.10263632051023 0.444540108285239 0.0289201072380365 0.675374071565133 ATTATTGTTGCTGCTCATTTAGTAACATCCAAGGTGGTGATAGGTACAAGAGTGTGGAGCACGTTGTCAGAAAGTATAAACTGAGTCCAGTCCTTCCTCACAACTTAACCAACATCTTAAGCCAAGTTTGCCAGGGTTCCGTCCATTGAAGGAAACTGGTGATCACACCTCTTTCATTCAGAAGAAAATGTGTAACTTAGATCCAACCAGGAAGTGTCAAAGACAAAAGCCTCAGAGAAGACTTATTTTCAAAATCTTTGTTCATAGGGTTGTATTAGTATCTAATAATAATATCCTGAAAAGAATGTGACAGGAAGGGGCAGAAGAAGTAGCTTCACTGGGACCTGGGACCTGGTGCACAGACACTGCAATTCCATGTTTCTCTTTCTTTCTCCTGAGTATGCAAAACAGGAATCTGGTCCAAGGCCCAAAAGTTCTGAGTTTTTTTTGTTCAGAGTGAGTTTTTGTCCAGTTTCTGTGTTTCTTTTCTGGTAAGGTGATTTCAGGAAAACTCTTTCTTTTCCCAGTATTACTCATTTCCAAGAGTCTGAGATTGGACATTGGATGTTGTTTTATAATGAACATGAAACCAGAACCAGCTCAGCATCATGACACAGAAAAATCGTAAGCTCTTTGGGAGAAATTTGAGAAACGGGTTGTAAAATCAAAAGAATCAAAAGTTCTTTTCTAAGACATGCTTGGGAACTCGGAATGCATTTTTCCATAGGAAATTTTAGACCAGTCCACCGCAGCCAGTGGCACTCATCACAAAGGCCAAGAGAGTGCTATACTAACAACATTCTAGAACCTGATCAGCACTGCTGAAAGGACACATCACAAGTCTCAAGTAGGCCCATCACAA TCONS_00236756 TCONS_00236752 TCONS_00236753 TCONS_00236754 TCONS_00236755 TCONS_00236757 TCONS_00236758 . 3' 39476 TCONS_00236756 TCONS_00236752 TCONS_00236753 TCONS_00236754 TCONS_00236755 TCONS_00236757 TCONS_00236758 . 3' 40337 EMBV3_30120 CAGCATGGTAGTCTTAGAGTGATGGACTTCTCACATAGTCGCTGGCTTCCTCCAGTTGCT Gene BVV0102_259115 - 1 EMBV3_36926 GK000010.2:8822376-8893214 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015871 1 XLOC_008578 NonCoding TCONS_00015871 XLOC_008578 NonCoding NonCoding - 10:8865123-8877027 - TSS11110 918 1 TCONS_00015871_3 79 0.800653594771242 2 0.923044610602369 7.48935514564693e-08 5.78540782913824e-08 5.30517357132134e-08 0.000434201949896538 0.000372365996577758 2.00335203557326e-08 3.04051110915843e-08 0 4.52160830805941e-08 0 0 0 0 2.41282559191971e-08 0 0 0 0 0 0.000654119079407418 1.66904680628359e-08 0 0 0 2.26420754433024e-05 0.000913378891093214 8.7278787839972e-10 0 0 0 XR_233040.1 LOC101908852 PREDICTED: Bos taurus uncharacterized LOC101908852 (LOC101908852), 2e-73 280 75.17 0.456427015250545 NM_001145414.1 CHM Homo sapiens choroideremia (Rab escort protein 1) (CHM), transcript 7e-09 66.2 72.80 0.133986928104575 0 noncoding CTAGCCTCTCCCTCTCTGCTTTTTTCCCCTTCACGGCCTCTTTCCTCCGGAGGGTAGCTGAAGGCAGAGAAACTAGCCCTCCCCGTCCAGGGAAGTTTGGATTTGCTAAGGGATTCTATTGGGATAAAGAAAGCAACTGGAGGAAGCCAGCGACTGTGTGAGAAGTCCATCACTCTAAGACTACCATGCTGTGAGGAAACCAAGCCAGCCACATAGCTCTGGTGAATGGAGAGGGATGCCCAGCCCGCCCCAAGCTGTTCAGCCGTACCTGTGGATCCACCCCAGTGAGCGAGTGAGGAAGCCCTTAGACATTCCAGCAGCAGCAGACCCCACATGGAGCTAAGAACCACCCAGCTGAGCCTGTCCCAGACTGTACAATAGAATCATGAAAAATCATACATTGTTGTTTTAAATCGCTAAGCTTTGGACCAGTTTATTCAACAGAAAGCGATAAAAAATGATTGTCTATTATTTGTAACAACATGGATGGACCTAGAGACTGTCATACTGAGTGAAGTAAATCAGACAGAGAAGGAGAAAGATCATATGATATCTGTTATATGTGAAATCTAAAAAGAAATGATACTAATGAACTTACAAAACAGAAAGAGACTCACGGACTTAAAGAACAAACTCATGGTTTTGGGGTTGGGGGAAGGATGGGGAAAAGGGATAGTTAGATGTTTGGAGTGGGCCCATACGCTCTGCTATATTTAAAATGGGTAACCAACAGAGACCTACTGTGTAGCACGTGGACATCTGTTCACTGTTATGTGGCAGCCTGGATGGGAAGGGAGTATGGAATGGATACATGTATGTGCGTGGCTGAGTCCCTCCACTGTTTACCCGTAACACAACATTATTCGCTAATCTGCTATATCCCAATACAAAATAGTGTTTTTAAGTTGCCTATTAAAT TCONS_00015867 s 5' 42659 TCONS_00015867 s 5' 43434 EMBV3_01098 TCCCACACCAGGACTCTATCCCACTCCCAATAATCCTTTTCAAGTGCCTTCAGGACCTTC Gene GeneID:540411|MAPK1IP1L:NM_001014963:107_cdna Constitutive 0 NULL GeneID:540411 10 GENE MAPK1IP1L C14orf32 MGC140801 mitogen-activated protein kinase 1 interacting protein 1-like EMBV3_24885 ATCCCGTTCTTGCTGAGGATACACCAGGGCGAGCATTTCAGAGAAGTGATGAAGCGGATT Gene GeneID:514813|USP7:XM_002697958:668_cdna UTR3_Alt 3 NULL GeneID:514813 25 GENE USP7 NULL similar to ubiquitin-specific protease 7 EMBV3_15311 AACAGCCTACTGAACTAGACGCGCTGGTGTTCGGCCATCTGTATACCATTCTTACTACAC Gene GeneID:615424|MTX2:NM_001101240:52_cdna Constitutive 0 NULL GeneID:615424 2 GENE MTX2 NULL metaxin 2 EMBV3_38820 TGGCGGCATGTTGGTAGTGCCGGACTTATTAACTGTTGCTCGTTTCTGGGGCCTTGCTAA Gene BVV0102_123078 + 0 NULL GK000025.2:34337705-34339707 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145251 TCONS_00146946 TCONS_00145260 TCONS_00146949 TCONS_00145254 TCONS_00145261 TCONS_00145253 TCONS_00146948 TCONS_00145259 TCONS_00145255 TCONS_00145252 TCONS_00145258 TCONS_00146947 TCONS_00145256 2 XLOC_088772 XLOC_089256 Coding TCONS_00145253 XLOC_088772 Coding Coding NSUN5 25:34320558-34339685 j TSS108885 5465 1 TCONS_00145253_2 487 0.0583714547118024 13 0.714943009515842 0.000791898167347257 0.000886706258363366 0.000797134788178049 0.000469106312081381 0.000446143466502426 0.000143345185347074 0.00063789784859944 0.000275331224043417 0.000241726793949895 1.87205158814844e-107 4.41325908622088e-06 6.14790129115784e-163 0.000100180441396643 0.000133068706994188 0.000227407805495212 7.21674858247582e-46 2.07032189946301e-117 4.67730905858494e-126 0.00159262645146891 0.00156146683255973 0.00106621754753843 1.8042911123266e-213 1.02558545387739e-119 7.17735125708717e-161 0.00142563857383443 7.09393761676472e-05 0.000665290249003607 2.6324805364562e-135 8.63128006855485e-230 2.79216882830242e-61 XM_002698191.3 POM121C PREDICTED: Bos taurus POM121 transmembrane nucleoporin C (POM121C), 0.0 3575 100.00 0.362488563586459 NM_178125.3 TRIM50 Homo sapiens tripartite motif containing 50 (TRIM50), transcript 0.0 1959 89.53 0.268984446477585 TCONS_00145253_2 sp|Q86XT4|TRI50_HUMAN TRI50_HUMAN E3 ubiquitin-protein ligase TRIM50; 0.0 882 90.97 0.997946611909651 10 coding 0 0 1 1 0.00437837568458993 0.970554355681302 0.0088765940764838 0.864824140252145 ATGGCGTGGCAGGTGAGCGTGCCTGAGCTGGAGGACCGCCTGCAGTGTCCCATGTGCCTGGAGGTCTTCAAGGAGCCCCTGATGCTGCAGTGCGGCCACTCCTACTGCAAGGGCTGCCTGGTGTCCCTGTCCCACCACCTGGCCTCGGAGCTGCGCTGCCCCGTGTGTAGGCAGGAGGTGGACTACAGCAGCTCCCCACCCAACGTCTCCCTGGCAAAGGTGATCGAAGCCCTGCGGCTCCCCGGGGACCCGGAGCCCCAGGTGTGCGCACACCACCGGAACCCGCTCAGCCTCTTCTGCGAGAAGGACCAGGAGCTCATCTGTGGCCTCTGCGGCCTGCTGGGCGCCCACCAGCACCACCGGGTCACACCCGTCTCCACCGTCTACAGCCGCATGAAGGAGGAGCTAGCAGCCCTCATCTCCGACCTGAAGCAGGAGCAGAAGAAGGTAGATGAGCAAATCGCCAAACTGGTGAACAACAGGACTCGGATTGTGAATGAGTCCGATGTCTTCAGCTGGGTGATCCGCCGTGAGTTCCAGGAGCTCCACCACCTGGTGGACGAGGAGAAGGCCCGCTGCCTGGAGGGGGTGGAGGGCCACACCCGCGGCCTCGTGGCCTCCCTGGACATGCAGCTGGAGCAGGCCCGGGGCGCCCAGGAGCGGCTGGTCCAGGCCACGGGTGTGCTGGAGCAGTTTGGCAGCGAGAGTCACCATGAGTTCATCCGGAAGTACCACGCCATGGCCTCCAGACCAGAGCTCCAGCAGGCCCGACTCTCGGAAGGTGCCTTCAGCCCCATCTCCTTCAAGCCAGGCCTGCACCAGGCTGACATCAAGCTGACAGTGTGGAAAAGGCTTTTCCGAAAGGTTCTGCCAGCCCCAGAGTCCCTCAAGCTGGATCCAGCCACGGCCCACCCGCTCCTGGAGCTCTCCAAGGGCAACACGGTAGTGCAGTGTGGGCTCCTGGCCCAGCGGCGCGCCAGCCAGCCTGAGCGCTTCGATTACAGCACGTGCGTCTTGACCAGCAGAGGCTTCTCCTGCGGCCGCCACTACTGGGAGGTGGTGGTGGGCAGCAAGAGCGACTGGCGCCTGGGGGTCATCAAGGGCACGGCCAGCCGCAAGGGCAAGCTGAGCAAGTCCCCAGAGCATGGTGTGTGGCTCATCGGCCTGAAGGAGGGCCGAGTGTATGAGGCCTTCGGCTGCCCCCGGGTGCCCCTGCCCGTGGCGGGCCACCCCCACCGCATCGGCATCTACCTGCACTATGAGCAGGGGGAGCTCACCTTCTTTGACGCCGACCGCCCTGACGACCTTCGGCCACTCTACTCGTTCCAGGCTGACTTCCAGGGCAAGCTGTACCCCATCCTGGACACGTGCTGGCATGAGAGGGGCAGCAACTCCCTGCCCATGGTGCTGCCACCACCCAGCGGGCCCGGCCACCTCTCCCCACTGCAGCCCACCAAGCTGTAGGGCTGCCTTTCCGCTTGGCATGGGGGCTTGAGGGGTCCTGCTGACTCCAGTGAGCGAAGGCAATGACTTCCTTTTTTGGGGAGGTCTTTGCCTGGGTGCCCCTAGAAACATTTATTATTGGGAGAATAACTATGGTAGCCATGGGCATGTTTATTAACCTCTATTGAGCTATTAACCTGCTTATTAACCAGCAGAGCCAGGCCTTGGGGTCCAAGGATCAAGCTGGGCTCCCTTGTTGCATGCATGCTCAGTCACTTCAGTTGTGTCCGACTCTTTAAGACCCTATGGACTGTAGCCCGTCAGGCTCCTCTGTCCATGGGGATTCTCCAGGCAAGAATACTGGCATGGGTTGCCATGCCCCCCTCCAGATCTTCCCGACCCAGGGATCAAACCCACGTCTCACATCTCCTGCATTGACAGGCAGGTTCTTTACCACACGTGCCACCTGGGAAGACCAGGCTTCCCTTAGCCCCTCCTAACCATGATCACTCTTCCCCCTGAGGGTGGAAACACTCCCACACATAATTCCCCATCACTGTGAACTTTAAGGATAATAAAACAGACGTCATTTCTCCCTTGTCAAATGATTTGCAGTGATCAGTTGCCGCACGTGCACGCTGCTTTATGCTCGGGTCTTTAAAAGCAGCTCCGGCCTCTGGTGGGGCCGCATCTCACAGCCATGAGCCCTTTGATTTCCACACTATCCTTTCTGGCGTGGGCAACAAGGCCTACGTGAGCTGCTGCCTTTGGCTAATCTTCCTCCTGCCGTCTGTGTGCTAGTATATGACTTATTGCTGGGAAAAGGCTTTAGAGGGCGCGGGGGCCGATGGAAACCTCTGCTGGAGCGGCACCAGGCCAGGCTGAAGGCTGAGTTGGCGCGGCTCAAGGTTCGTCAAGGTGTGAGCCGGAATGAGGACCTGTTGGAAGTGGGATCCAAGCCTGGCTCAGCCTCCCAGGTGCCTCGATTTGTGCGAGTGAACATTCTGAAGACCTGTGCTGAAGATGCCATTGATTATTTTAAGAGACAAGGTTTCTCCTACCAGGGTCGGGCTTCCAGCCTCAACGACATCAGGGCCCTCAAAGGGAAGTGTTTTCTCCTGGATCCCTTGCTGCCAGAGTTGCTTGTGTTTCCTGCCCAAACAGATCTGCACAACCATCCACTGTACCAAGCTGGTCACCTCATCCTGCAAGACAAGGAAGATCTTCGCCTTTGACCAGGATGCCAAGCGACTGGCGTCTATGGCTACCCTGCTGGCCCGGGCGGGGGTCTCCTGCTGCGAGCTGGCCGAGCAGGACTTCCTGGCGGTCTCGCCCTCGGACCAGCGTTATTGTCAGGTCCAGTACATCTTGCTGGATCCCTCCTGTAGCGGCTCTGGGATGCCCAGCAGGCAGCTGGAGGAGCCCAAGTCTTGCACGCCGAGCCCGGAGCGCCTGCGAGCACTGGCTGCCTTCCAGCAGCGGGCACTGAGCCACGCGCTCACGTTTCCCGCCCTGCGACGCCTCGTCTACTCCACGTGCTCTGTCTGCCAAGAAGAGAATGAAGACGTGGTGCGAGCCGCCTTGCAGCAGAGCCCGGGGGCCTTCAGGCTGGCTCCCGTCCTCCCCTCCTGGCCGCACCGAGGCCTCAGTGCCTTTCCAGGCGCTGAACACTGCCTCCGGGCCTCCCCTGAGACCACGCTCACCGGTGGCTTCTTCATCGCGGTGCTTGAGCGGGTAGAGGAGCCAAGCTCCGGCTCACAAGCCAAAGCAGCAGCGTCAGAGCTGACGCCCAGCCCAGCCCCAAAGGGGAAGAAGAGGCGGCGGAAAGCGGCGGCTGCCCCTGGCACGTAGTGGGCGCAGAGCACCGACTCCTCTCAGGCCCCAGATGGCAGTCTGGTCATGGCTAGAGGAAGAAGACCGGGAACCCTGTTCCTCCAGCTGGAGAGAGGACACTCCTCTGCTTTGGGTCCCCTTCCCTGGGCTGTGCTTTTGTGGGTGACGCACTGCTGCTCACAAAAATAAAACGCAGGACGTGGTCTACGATAGATCACAGTTTTTTTTATTCTTAATGACATAAGCAAGGAGAAAAATCTCACATTCATACTAAAAATTCCAACTAGACTCACAGGAATTCAGTCTTCGTGTATAATGGAAAGTCCCAGCCTCCCGTCCCTGTCCAGTGCACGTGCGTGTCCACACCCACATTTCCGCGCTCACACTCGGGACGGGGGGCTCCTGAACCAGCTGTCCTGCCTGTGGAGCTGAGGTAATCGAGCCGAGGGTCTACCTTCCGTGAGGTATAGGCAGCAGCCTGATTTCTAGACCCGTGCCCGCCCCTTCCCATCCGAGCAGGTACTCGGGACTCAGGCCCCCCACAGCTCCACACACAACAGAGCTCTCGGGGTGTGGAGGCGCATCCCCCGCCACGAACCATTCACCCTCAGTCACAAAGGGGAGGGGACTAGTTACACCTACATCACATTATTCATAAAATAAGAATTACATTTTGTTTCCAGAAGGAGCTCAAGTCCCTCAGGAATGCTGCTGGGACAGCACCTGAGCCTCCTCTTCACACAGGCATAACTTAACTCTACACAACTAATTTCTAGTCAAATAGCATTTATACTGAACCACCTCAATGAACCAAGCTTGAAGGAATTTAAAAGGCAATTTAGCTTAAATACAAAAATAAATTTTTATTGTTAAAAAATGTTTAAATATTTTTTTTTTCTTTTAATTTAGACACACGCATTCATACTTCTCCCAAAGAGGATGGGCATGGCAGCAAGGCTCATGGGCCTGGGGTAAGGGGTTTGGGAACAAAGGGAGAAGGGAAGGGATGGAGGGAGGAAGACAACAATTTTAAAATGGTTCACTAATTTAGGGTTTCTACCGTATACTACAGACACTGAGGCTAGGTAGGTGGGAAAGGGCGAGCACAGGGCAGAAGCCCTTCCCCTTGGCCCCATGCTCCTGGGCTGCCAGCCCTTAAAGTCGAAACACCATGTCAGAATTCAAGGCTCGGCACCTGGAGCCGCAGTGGCGCCACTGTCCACGTCGCTTAGCAAGGCCCCAGAAACGAGCAACAGTTAATAAGTCCGGCACTACCAACATGCCGCCACTCACACAATTCAATTCTTCCTCCAAACTCGATTCAAAGAGCAACAGACGTGAGCATCAGACAAAACAACACAGGACAAAGCTTTAAACAGACGATCCCGGAGAGGCAGACGGGCCCAGTGAGGTCAACGGGGATGATGGGGGAGCCGGCAGCTGAAAGCAGCAGGGTGGGGTGGCTGTGTGGGGGTGTCCTGCCTGTGCCAAGAGCTTCCCTCTCCCAAGGGAGGCACCACCCCTGGGTCTGCCAGGCTAACAGTCTTGAGCCACCAAGCTTTGAGGGGCCAAACTGGCAGAGTGGGCTGGAGGTGAAAGGTCAGCTCGGACTTGGCAGGACGAAGTGGAACAGCAGGAGCTGCACCTTGGAGCTGGGGTCTCCAAGGCAAAGCTAGACTCAGGACCATTTTAAAAGGAATCGACCCTGCGAGGAACCGGTGAGGGATGAAGCAGCAAGAAGTGGGGAAAGAGTCCCCTCATGGGACTGGAGGGGGAAAGCCACTTGTACAGCCAAGCCAAGCCCGGTGTGGCTTCAGGGACGGTCCACCCCAACCCATCAAGTGCACAGAGATGCAGCTGGCAGGGCTTGACCTTCTGGCCTCCGGCCAAGATGGCTCTCGGGGGAGAAGGCGGGCAGCAGGCTGCCTGCCTGAGCTCACACACTACACGAGCGTCGGGGAAGGAAGTGGGCAGTATGTACAGATGTTTCTTTAGTTCTCTCCAGCTTCACCAGTTCAACTGTTCAAGTAAGGTAACAGGCTTCTGCCCTGCCACGTCCCTCCCCCCATGGCCCCCCAACCTGGGGCTTCTGCTTCCTGAAAGAGGGAAATAGCCCCGGATGCTGCCACTACCTCCCTGGGGGCTGAAGCCAGAGGCCTGGGGTTGGTCTGCTTGACGGAACTAGAAGG EMBV3_32170 ATTCCCACCTCTGGGCCCTTGCACTTGCTCTTAATGCCCTTTCTCCAGGTTAAATGTCCC Gene BVT0102_004772 + 1 EMBV3_38627 GK000007.2:21585663-21593839 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212445 TCONS_00212448 TCONS_00212449 1 XLOC_130183 NonCoding TCONS_00212449 XLOC_130183 NonCoding NonCoding - 7:21585714-21586931 - TSS159415 875 3 TCONS_00212449_1 72 0.142857142857143 2 0.282072368421053 1.3433398868489e-07 0.000101418175642329 1.0573733812391e-05 2.84693139698414e-05 0.00143883397413667 5.34347212219817e-05 0.000133294674769809 0.000444450610255988 7.41188330906672e-05 0 6.34476849246617e-12 7.10574323881561e-18 8.62483838761967e-67 8.55663530583769e-53 0 0.00169033705615415 0 0.000114695745099856 0.000565476742321369 0.000136297905871976 0 0.000302633003067923 6.63158920973466e-05 0.000574784043282764 0.000154543316132296 0.00071897789634258 0.000308021734056319 1.2061355877054e-09 0 7.36384131058867e-11 XR_231644.1 LOC100849681 PREDICTED: Bos taurus uncharacterized LOC100849681 (LOC100849681), 0.0 1085 99.83 0.689142857142857 0 noncoding 1 1 1 1 0.0568962464854085 0.587120158749149 -0.0137822485768419 0.830448024581526 TGCTAATAACGACTCGGCGAGCGATCGGATTGGGTATACCCATCCCCTGGGGCGTGACCATGCAGATACAGGTCGGCGCGCCCGTTGGTGATTGGCTGCGGTAGCCACTGAGCCGCGTGGGAGCCCCCAACAGGGCCGTGCCCCACCCTGCATGCAAGAGCTTCTCTCCCTCCTGTGAAAGGGCCTCAGCTTTCTCTCCTATGCAATGGAAGCTTTGCACAGAGTCCACGTCCAGAAGGCCGGATGCAGCAAAGCTGAGACCAGGAGCTGGGCTCGAAGCAACTAAGAAGAATGTGGTGGGGACAAGAAAGCTGCGAGGATCTCGTGAAGATGAAGGGCCAGGAGACCCTGCTCTGGAGTCTTGGGGACCCCCAGGCAGCAGCCTGGTCCTCTTACAGCCTGGACTGTGTTTCCTCTGACCCCAGGATAATTGTGGTCACTGGATGCTCCTGATGGCCCGTTAGACCCCAAACAATCTACCCACAGCACCTTCCTGCTCTCGCCTCCCTTCATTTTCCTCCTCACTTACTCTGGCGACCTCAACGTTCCTTAGATATGTCCATTTCATTTATTCCCACCTCTGGGCCCTTGCACTTGCTCTTAATGCCCTTTCTCCAGGTTAAATGTCCCCCTTTCCAGTGAGACATTCCCAGGCTTGTACCCCACCCCAAACACCCCATCTTATCTTTGCTCCATATGTTCATTTCCTCCCTATAAGCTGCCTGTTTGCTCATTGCTATATTGCCAGCACCCAGAACAGTGCCCACAGGTGCTGTCAATGCATATATATTAAATAAACAAATAAATGTATAATGTAAATTTCTAACAGGCAGGTGCAGCAGCTTTGGAAAGCAGTCTGGCAGTTCTTCAAAAGG TCONS_00216017 r 5' 27 TCONS_00216017 r 5' 27 EMBV3_07850 GTGTGCCATCAGACACTGCTGGGTCAACTTGGAATCCAGAAAGCTCCTCTTCCATCATGA Gene GeneID:783012|LOC783012:NM_001168245:8_cdna Constitutive 0 NULL GeneID:783012 27 GENE LOC783012 NULL hypothetical protein LOC783012 EMBV3_16672 AAGGGAGACCAGTATGATGTGTGTGCCATCTGCCTGGATGAATATGAGGATGGGGACAAG Gene GeneID:616030|RNF167:NM_001076405:180_cdna Constitutive 0 NULL GeneID:616030 19 GENE RNF167 MGC140741 ring finger protein 167 EMBV3_15036 ATGAAGGCCTTACTGAAGGAGAGGCAAGAGCAGGATGAGAAGGAGGCCATCAGCCGGCTC Gene GeneID:519807|LOC519807:XR_083603:218_cdna Constitutive 0 NULL GeneID:519807 2 PSEUDO LOC519807 NULL similar to Coiled-coil domain-containing protein 108 EMBV3_04266 CGCTGTGTTCCAGCATTCAGTTCTTCATCCGGGGAGATCTTCACCAACCCCTTTGACAGT Gene GeneID:505037|LOC505037:XM_002688721:22_cdna Constitutive 0 NULL GeneID:505037 7 GENE LOC505037 NULL similar to egf-like module containing, mucin-like, hormone receptor-like 2 EMBV3_42305 GCTGGGCCACCAAATAGCCAGATGGTCTCAGAACCTGGAAAAAACATCACGCTCACCTGT Gene GeneID:615496|CD226:XM_002697693:214_cdna Constitutive 0 NULL GeneID:615496 24 GENE CD226 NULL CD226 molecule EMBV3_42818 TTTGCCTGACAGCTTCACTTTCTTTGAGGTCTGGAGCTGGTGATCACACTGGCCCGTCAT Gene BVV0102_327861 - 1 EMBV3_42695 GK000008.2:65321340-65339463 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232291 1 XLOC_141777 NonCoding TCONS_00232291 XLOC_141777 NonCoding NonCoding - 8:65330963-65332309 - TSS173795 1346 1 TCONS_00232291_1 108 1 0 0 0 0 6.16950551957197e-06 0 0 0 0 0 0 0 0 8.10051652162875e-05 0 0.000121196765223745 0 0 0 0 0 0 6.61576154131387e-05 0 0 0 0 0 0 1.08200771937827e-05 0 XR_235611.1 LOC101908166 PREDICTED: Bos taurus uncharacterized LOC101908166 (LOC101908166), 1e-14 86.0 96.15 0.037890044576523 XM_003946131.1 LOC101055654 PREDICTED: Mus musculus uncharacterized LOC101055654 (LOC101055654), mRNA. 0.0 704 86.72 0.444279346210996 0 noncoding 0 0 0 0 0.0299387611351517 0.840481173859999 0.00282582243609694 0.952100754628948 CTGAAAACATTCACTTGGTTTGAGGTCATCTGAAGAAGTGCATATGATTAGGGCCCTAAGTTTAAGCAAGGGGTGGTGTCCCAGTTTGTAAGAAAGCCTAGTCTCTGCTTCCAAGACTTTCCATTTGAGTGCAAAAATGTTGCCACTTATCAGCGACCACTGGAACCTCTCCAACAGTCAGTTCGGCTTCCTACCCAGAGGAGCACTGAGACAGCTGATTGGTTCAGAGCAATCAGACAACAGGCCTCAGCCTCAAAGCGGTCAAGGAACAAAGATTGGTGACCAGATATTCAGGGGAAAAAAGCATGGAAAAGGCAGGAGAGGGGGAAGGGGACGAGGAGAGAACATAATTAACCAACGTAAGCGTCCAGAAAGTCACATCCACTCAACATGTCAAAGAGAAAAATGCGTTACCTGGAGACATTCTGCTAGGGGTGGATTTTTTTTTTTTAATTTAAGATAAATAAGAATATCGAAACTGTCACGGAGGAAATCCAAGTCATATGAACAAACTTAACTAACAAGTTTTACATATTAACATTTACAAAACGTAGTTTACTCAACAAATTCACTGAAAGATGTCCTATTTCCTAAAAACTGTACCTAACAGTTGTCCTTTTGAGTGATTCCAGTCCTGCACGCGATTTCAAATTGAAGGGGGAATAGGTGGGGTGCAGAATACATGAAATTTTTACAGCATGGAAATAAAAAGTATTTTTAAACCTTCCTGGGGTGAAAAGTTAGGCAAAAGGTAATACGTGGAAACTGTCAAGTCCTTCTCTACACACCCACCCACCAGATACCATCGCAGCCGGCTAGGGGAGTCTCCCTCTTTTTGCCTGACAGCTTCACTTTCTTTGAGGTCTGGAGCTGGTGATCACACTGGCCCGTCATGGTATTTTCAGTTAACAAAGCAGTTACTCAACAGGGGAAAAAGCCACAAAGGAGCCGAGCAGCTGCTGCTGCACCCGTGATGCAAGTGCAGGATGAGCCCCGGGCCGCCACCGCCGCCTCGGCTCCTCCGTGACGTCCGGGAGGGGTATCCCCGGCCCTCAGGAAGTGGTGGCCGCGGGCGGCTCCGCCCCCAGGCAACTCTGGGCTGGCGAGGACGCCGGGTGGCGGGAAGGCCGGGCCCGTGACGGACGGGGATCACCGGCCGAAAGCCGAGCACGCCCCGCGGGCCGCGCGCCCCGGGCCCTCCCTCGAGTCACCCTTCATGGCGGTCTCCGCGCCCTGACTCGCCCTCCGCTCCCGTCACAGCCCGCGCGCCCCACTCTCTCCCACAGCTCACACCCACTCACCCCGACCCCCTGCGCCGAGCCTGGCCCAGCGTCGCCGGTCACCAG TCONS_00225675 TCONS_00225676 . 5' 7155 TCONS_00225675 TCONS_00225676 . 5' 7155 EMBV3_25648 TCTCAGTGTTCCCTTGAGACTTCAGTACCTTCGCCACATGGCCACTTAGGGATATGGTCA Gene GeneID:533988|TMEM194A:NM_001102161:4_cdna Constitutive 0 NULL GeneID:533988 5 GENE TMEM194A MGC179389 TMEM194 transmembrane protein 194A EMBV3_17746 CTCATCCCGCAGCTGAAGGAGAGTCTACAGCGCCTGGCACATGAGTGTCTGTCACAGAGC Variant GeneID:614626|MED29:NM_001080316:733_cdna 224^367 2 EMBV3_17301 GeneID:614626 18 GENE MED29 MGC148741 mediator complex subunit 29 EMBV3_31692 GATAAAGCAGAGTTAACCCCCGGTATCACCAACACTGCCCAGCCTTGTCTCACAAATGCA Gene BVT0102_286810 + 1 EMBV3_04220 GK000023.2:864356-1354730 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21460 GCACTTCTGGAGAACATGCACATCGAGCAGATCTTTGGAGCATATGCGACTCATCCTTTC Variant GeneID:541071|NCOA7:NM_001102254:18_cdna 325^477 3 EMBV3_27509 GeneID:541071 9 GENE NCOA7 MGC151725 nuclear receptor coactivator 7 EMBV3_21176 CAGCTCAAGGGAAATATAAAGCATTTTCTACCTGTGTGTCCCACGTCTCGGTTGTCTTCC Gene GeneID:507378|LOC507378:XM_002688678:109_cdna Constitutive 0 NULL GeneID:507378 7 GENE LOC507378 NULL similar to CfOLF4 EMBV3_40143 GGAGAGGAGGAACCTGATCACGGTGTGCAGGTCAAGTAACCTGGTTTGGTTACGGAAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19080 GTCATTGTTTCCAGAGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTA Gene GeneID:782170|TWIST1:XM_002686684:94_cdna Constitutive 2 NULL GeneID:782170 4 GENE TWIST1 NULL twist homolog 1 (Drosophila) EMBV3_27823 TTGTCTCTGGTGACACTTTCCTAGTCCAGAAGGCAAAGGCCAAGGACATTTCTTGTGACA Gene GeneID:616362|TRIM55:XM_002692681:61_cdna Constitutive 0 NULL GeneID:616362 14 GENE TRIM55 MGC137179 tripartite motif-containing 55 EMBV3_40585 CCGAAATGAAGATCCGTTGGTTTTATTAGCATGGAGGTGCACAAAGCTCTCTCTTCTGGC Gene GeneID:539998|FBXO33:XM_002696729:36_cdna Constitutive 0 NULL GeneID:539998 21 GENE FBXO33 NULL F-box protein 33 EMBV3_17077 TGCCTAGGGAAATAGGGCTTTATACACCCACACTCACCTGTGGATGCCCATCACTGTTTC Gene GeneID:280833|KNG1:NM_001113277:21_cdna Constitutive 0 NULL GeneID:280833 1 GENE KNG1 KNG KNG2 MGC128812 kininogen 1 EMBV3_20266 AAAGCCTTCATTCTTGGGTTTCAGGTGGAGTTAAACCTTTAAAGGGAGACCACCTGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25374 CGTCTGGCAAAGTTCAAACCTCACTCATCCCATCACAACCTGTACTGCACTCTCTTCCTG Gene GeneID:523521|BOSTAUV1R437:XM_002697139:97_cdna Constitutive 0 NULL GeneID:523521 22 GENE BOSTAUV1R437 VN1R5 vomeronasal 1 receptor bosTauV1R437 EMBV3_33641 AACAAAACCACGTAGACAATTACTTGGGATGTTTGTGGCCAGGCAGCTTCCCCTTGAAGC Gene BVT0102_107192 + 0 NULL GK000016.2:52468866-52484467 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17477 ACCCGTGTACTCACCGCGCTCTCAGCCACCGCTGTTAACCCACTTTCTGAACTCACTTAA Gene GeneID:508632|COL4A2:XM_002692011:5_cdna Constitutive 0 NULL GeneID:508632 12 GENE COL4A2 NULL collagen, type IV, alpha 2 EMBV3_28192 GCTTCTGGAACTACCTTATTCTGCACCACCTTTTACTACCAAGCTCTGAGTGGAGACCCC Gene GeneID:507083|C19H17orf61:NM_001045957:45_cdna Constitutive 0 NULL GeneID:507083 19 GENE C19H17orf61 C17orf61 MGC136990 chromosome 17 open reading frame 61 ortholog EMBV3_01406 TCTGCACTTTGCTGGTCTTTAGTTCATGGCTCGGGGGGTTTCTTACCATTTTTCCACCAC Gene GeneID:787945|LOC787945:XM_002687603:703_cdna Constitutive 0 NULL GeneID:787945 5 GENE LOC787945 NULL similar to rCG29204 EMBV3_03596 GAATGTCTGACCACCGTCAAGTCAGTCAACAAAACGGACAGTCAGACCCTCCTGACTACT Gene GeneID:615637|ERCC1:NM_001076385:376_cdna Constitutive 1 NULL GeneID:615637 18 GENE ERCC1 MGC140762 excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) EMBV3_09688 CCCACGGAAAGCCATCCTTATTACCAACTTGCGTGAAGATGCAAACATTCTGGTGAACAC Gene BVV0102_215426 + 0 NULL GK000023.2:27331337-27331771 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134546 TCONS_00134537 TCONS_00134542 TCONS_00134541 TCONS_00134543 TCONS_00134535 TCONS_00134540 TCONS_00134545 TCONS_00134544 TCONS_00134539 TCONS_00134536 TCONS_00134538 1 XLOC_081440 Coding TCONS_00134537 XLOC_081440 Coding Coding HSPA1A 23:27329821-27336821 o TSS100270 2737 1 TCONS_00134537_1 232 0.168432590427475 2 0.609229889984283 4.05113476361033e-08 0.000386422774688969 6.17061591610224e-07 0.00154727618099247 0.00134889431876427 0.000423574848868846 0.00131767565348763 0.000931835714390255 0.000781304448936709 1.0859510452128e-10 6.03325195594777e-08 3.68676895545389e-09 0.000285559551799878 0.000199795409320264 6.76100435951636e-09 0 0.000406113929953386 0.000614838311640994 0.00156306624285772 0.00519826028234862 0.00195133720330514 0.000594743183112742 0.00122664555712116 0.00156035663234758 0.000130169027824777 0.00172353734275873 0.00150218124852301 0.000251426654845473 0.000101370697373775 1.28881245030772e-07 NM_203322.2 HSPA1A Bos taurus heat shock 70kDa protein 1A (HSPA1A), mRNA. 0.0 1418 100.00 0.286810376324443 XM_005249067.1 HSPA1A PREDICTED: Homo sapiens heat shock 70kDa protein 1A (HSPA1A), 0.0 1204 93.69 0.289002557544757 TCONS_00134537_1 sp|Q27965|HS71B_BOVIN HS71B_BOVIN Heat shock 70 kDa protein 1B; 8e-166 477 100.00 0.995689655172414 1 coding 0 0 0 0 -0.702382893112397 0.153677143666844 -0.0203279337988828 0.691841741477476 TTGGGGGACAAGTCGGAGAACGTGCAGGACCTGCTGTTGCTGGACGTGGCTCCCCTGTCGCTGGGACTGGAGACGGCCGGAGGCGTGATGACCGCCCTGATCAAGCGCAACTCCACCATCCCCACGAAGCAGACGCAGATCTTCACCACCTACTCGGACAACCAGCCGGGCGTGCTGATCCAGGTGTACGAGGGCGAGAGGGCCATGACGCGGGACAACAACCTGCTGGGGCGCTTCGAGCTGAGCGGCATCCCGCCGGCCCCGCGGGGGGTGCCCCAGATCGAGGTGACCTTCGACATCGACGCCAATGGCATCCTGAACGTCACGGCCACGGACAAGAGCACGGGCAAGGCCAACAAGATCACCATCACCAACGACAAGGGCCGGCTGAGCAAGGAGGAGATCGAGCGCATGGTGCAGGAGGCGGAAAAGTACAAGGCGGAGGACGAGGTCCAGCGCGAGAGGGTGTCTGCCAAGAACGCGCTGGAGTCGTACGCCTTCAACATGAAGAGCGCCGTGGAGGATGAGGGGCTGAAGGGCAAGATCAGCGAGGCGGACAAGAAGAAGGTGCTGGACAAGTGCCAGGAGGTGATTTCCTGGCTGGACGCCAACACCTTGGCGGAGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAGCAGGTGTGTAACCCCATCATCAGCAGACTGTACCAGGGGGCGGGCGGCCCCGGGGCTGGCGGCTTTGGGGCTCAGGGCCCTAAAGGGGGCTCTGGGTCTGGCCCCACCATTGAGGAGGTGGATTAGGGGCCTTACTTTTTGTCTGTCTGTAGTAGACCTATGGACTTTGGTCTTGCCCTGTATTTACTCCTGTGATGTGTCAGTTTGTTCTATGATAAGGTTGTAACCTCTAACTAGCTTGTTTTTGTTATTTCTGTATGTTATAATGAGTGTGTTCACCAGAATGTTTGCATTTTCACGCAAGTTGGTAATAAGGATGGCTTTCCGTGGGTTTTTTTTTGTTTGTTTCAAGTGAGTCAACACTGCCACCCTGTGTCCTGTGTTTTGCTTTGTAAACACACCAAAAGTCATAGAATTAAACATTTGTATACTTAAGGAATAAAAAGAAAATGATAAATGCAGATTGTTTGTTTATTTGGGGAGGGATAATGGCTTCTCTGAATGTCTGAATTCTATAGACCATGAAAGGGCAGTACTTCTGGAGATATATATGTTAGGCGCCATGGCTATAGCTATACCTTGTTGTGACTTTATTGTAGGTGGTAAATTATGTCCATAACAGAAAACAAATTCCAGGTGCCCCTTTTGATTTTGGTGAGGTTTGTTTTAGGGAAAAGTAGGGATGGGATTTGCAAAGGGTTTTGGGGAGGAGAAATGAGTGTGGGTTTAAAGGCAGTGTTGAGAGAGGTTTATGTTTCCTTCCTCTCTTATACTCATTTTGTGCAGAGCTGTTCATATTTAATCTGTGAGTCTTCCAGTCTTAAGTATAAATAAATTTAAGGGTGGACAAAAGAGTAAAAATGAGGTGCAGTTTAAAACTCCCTTTTATAAATCCCACCTGGGTGATCTAGTGTAAATTATTTAGCCTCTTAGTTTTGGTTGTTTCCTTTGAAAATAAAGCATTTGTCTGAATTGCCTCACTTCCAAAGTTCTAGATCATCACGAGCAGAAATGTGCTATAGGCAAGCATTGGCTTCAGCTGTGGTCTTTGAAGCTGGAGTTTTCCAAGTGAGGGTTTTAGGGAAGTGAGAAACTGAGTTTGGGGGCAAGGCAATAAAGAAGGATGCCAGGCACTGTACCTGGATCTTTGAGTCACCCCAGTAAGCCTCAGTAATTCTCATCACACCATTCTCTACCCTAGGTATTCTGAAGCTTTTTTCAGAGGTTAGCATACGGAGGTGGTCACTTAAGCTATCCAGGGCAAAACTAGGGAGAAACAAGTGATTTCGGGGCCAGGGTGTTTTTCCACTCTGCCTGAACACGGGTTGGTGTTGTATGGTTCCTGTCTGGCTTCAAGTGGTGATTTTACTCCAGTTTTAGGTAAAAGAGTCTGCCTTCAATGCAGGAGACCTGGGTTCGATCCCTGGGTCTGGAAGATCCCCTGGAGAAGGGAATGACAACCCACTTTAGTATTCTTGCCTGGAGAATTCACTGGAATGAGAAGCCTGGCGGGCTACAGTCCATGGAGTCACAAAGAGTCAGACAGGACTGAGTGACTAACGCTTTTTCACTGACAGTAGCCTTTTTTGTGCTTTTCACAGACAATCTGTAAACAAGAGAAACTGAATAACACATTTAATTATGAAAAAAAGGGAATAAAAGCTGTGCAGGGTAGAGCTTGGGAAATGGGTGTTCCTCCCACACAAGCCCTTCCCTAGGGGCTGCTTCTCACTGGAGCAGTTTAAAAGTCCTCACTTTGTTGCATTAGTCATATCCAGACTCTCTTGCTGCCCTGACTGTAGCTCAACAGGCTCCTCTTCCATTGGATTTTTTGGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTTTCCAACCCGGAGATCCAACCTGCATCTCCTGCATTGGTGGGTGGGTTCTTTACCACTGAGCCATCTGCGAAGCAACACTTTCTTTAGCCTGATTAGAATCTCAGCCTCTTTCCTTCCAAAAAGTGAGCCTGCGAATCTCAGCCTCTTTCCTTCCAAAAACTGAGCCTGCGAATACCAACTCCAGAATCACGCAAC TCONS_00134547 TCONS_00132864 s 5' 0 TCONS_00134547 TCONS_00132864 s 5' 0 EMBV3_05381 ATTACCACGTCGCAGGTCAAAGTGGACAAGGTGCAGATCATCGGCTCTAACAGCTGCCCC Gene GeneID:614838|PIK3R5:XM_002707761:384_cdna Constitutive 0 NULL GeneID:614838 19 GENE PIK3R5 NULL phosphoinositide-3-kinase, regulatory subunit 5 EMBV3_22784 TCCAGAAGAGGAGAAGAGGAAACACAAGAAGAAGCGCCTGGTGCAGAGCCCCAATTCCTA Gene GeneID:615638|RPS27:NM_001098135:210_cdna Constitutive 0 NULL GeneID:615638 3 GENE RPS27 MGC137064 ribosomal protein S27 EMBV3_12557 GAGAAGTGTTCCCTTTTCCCAGTGTTTAAAGTCTTATGTGCTTTGGTGCCACCCACTGGC Gene GeneID:614406|SYTL2:NM_001102278:38_cdna UTR3_Alt 2 NULL GeneID:614406 29 GENE SYTL2 MGC151530 synaptotagmin-like 2 EMBV3_29037 GTCTGCATTCCGGCATCTGGACAACTTCCCTTCAATGCCTGTTTCTTCTCAGTATTGAAT Gene BVV0102_018162 + 0 NULL GK000028.2:25144086-25207673 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161925 1 XLOC_098809 NonCoding TCONS_00161925 XLOC_098809 NonCoding NonCoding - 28:25194937-25200594 - TSS121257 5657 3 TCONS_00161925_2 94 0.0737139826763302 1 0 0 7.10512853035838e-06 1.63585000176593e-06 0 0 7.90405205120418e-08 0 0 1.74344617743821e-07 0.000162921118347775 4.57270089151893e-05 0.00017003008495845 0 1.26393403134582e-05 2.08146790356473e-05 0.00324951012563051 0.00168458633377265 0.0019604334105065 7.60573341715328e-06 0 0 0.00111500272157347 0.00078004509975799 0.0015795548878487 0 0 0 0.000134136332759651 6.6936457674507e-05 0.000122222216428587 XM_003587999.2 TET1 PREDICTED: Bos taurus tet methylcytosine dioxygenase 1 (TET1), 0.0 8814 100.00 0.863708679512109 NM_001253857.1 Tet1 Mus musculus tet methylcytosine dioxygenase 1 (Tet1), transcript 5e-134 484 83.37 0.0850273996818102 0 noncoding 0 0 0 0 -0.386248683468483 0.033494889678484 -0.0170573196199708 0.748195780421308 TAGTACAACTGGGAATTTTGATCTCTTGTAGAAATTTATGATGAGAGTTGTGAAATAAGGTAAAATAGTGGCCTCACAGCCCTGGAAGATACCTTAGAAGTCATACAGTCCAGTCACTGGGGCCCAGACAGATGTCAGTGTTGGTGTTCAATTATGTTTGGAAATAAAATTTAAACAGTCAAATGAAGGCCACTTTTTGGTTAGGAGGACTATAGGAAAATTTGATCTGCTCACCCACAGGGGACTTTATCACTATAAAGTAATCTTATCTTTGGTACAAGTCAAAATAAAATGGCTTTTGGGTTCTTTTTCTGAGCAATTCAGGGTAAGAAGTGAAATTGAATCAAGATTTCCCTGCCTGTAGAGTTTCGTGGGCCTTTTGTGGGAAATCTAGCTGACTTTTACCTATGAAGCTGTCCTGTTAATTCATCTCACAAAATGTGGCAATTGTCCTATTTGCTATTTCAATAAATGAAAATCAAGTACTGATAGAGTACAGGTTTTTATTTCCCCTGGAACAAGTGTTTGGCATATAAAGGGAGTTATAAAAGACTGAATGGTTGGAATAATTGGGGAAAGTATATTTCCATTGTATATATTCCCTAGCCATAGTTGTACAGTCTATCCACATTCTTGCATAGTTGGCCTCACAACAGAGTCCTAGACTAGTTATTTTGATGGGACTGTCTATGTGTGTTAGAATACTGTTTTGTGCACAGCTCCTAAACTTGCCCGTAAATGTACTGAACTTGTGTAACTTTGATGTCAGTGATATGGCACACTTAACCAAAATAGAATTCAGTGCCCTGATTTCTGAAGAAGTCTGGATTTATTTAAACCAAATTAGGCTCCGTGTTGAGCTTTCTTCTAATGGTTTACAAAATGATGCCAGGAGCCGTCCCTCAGAACTATCTGAGAGACCGCCTCCTGGGCTTGAAGTCCTTAGAAGTTTCGCTGAATAAAACATAATTCTTAACTTGGCAAGTGAAAAAAAAAAGATGCCATCTATGGCTCTGAAATACAGTTTGGAAAGAATCAGTATGTTCTTTATCAGAAGTGGAATTTGTGTATTTTCTTGGAATATATTGAGAATCATTGGAATCTTTGCTTTTCTCTAGTGTATAAAATAAGAGTGTGAGTTCTTATGTTAATTTTGGAGATGGTGGAGCTGGTTTTAATGCAGTACATAACTCTTCTTGTCCATAATGAACTTGACAAACTAATTGTCTGCATTCCGGCATCTGGACAACTTCCCTTCAATGCCTGTTTCTTCTCAGTATTGAATTAAATACCATTGTTGACTTCAAAGGGCATGTGTTTTGTTCCTTCAGGTAATCCAGGTGTATTTGTCACTGCTTATTTTCCCTTCTGTGAGGGTCTCACCTTGTGTTTGTCTTTTGCACTGTTTAATATCTCTAGCTGTAAAAGTCTAACATTAATCATTTCTCTTTTGTTTGTACTCCTTTCCCATCCCTACTGTGATGTTCATGATCTTCCTTGGATCATAAATTTTCTTCTAGTTTGCTCAGCCATAGATGTCCCTTAAATTAAAATAAATCTTAGTCTAAGGTAAATGTTATATATAAATGGATTTAACCCCTTTATGTCTGAGTGCAACTTTGGAAACCCTTGGTTAAGAGTTTAAACCTAGTTTTCCTAAAAAAAAAAAAAGTCCTAGTAGCTATTACGAAAAGCATTCTCTCAATCACCACAAAAAAAAAAAAAAAAAAAAAACACCAAAAAAGAAAACAAAAAACCTCAACTCTCAAAAACATTTTCATTTTTGGAGAAATAATATTGGAAAGTAATTTGGTTTCTTCTCCATCTGGCTAGGTATAAACTTGCATCTTTGAGCAAAAACTCTGGTATTATTTTTCTTTTCTCATTTTACTGCTGAAGCTACATTGTCAGCAAGTGTACTTTCATTCTTTTTACAGTTTTTAGTCCTTTCCTCTGATTTTCTTTAAAACTGTTGCTTCCACTCTCTCTGTTCTATCTTCATTCCCCCATGTATGTCCCTTACACAGATACACATGGTTCATTTTAAGAATAGCAGTGAACTTGGTCAGTTGTCTTTTCCTGTCTTTTAAAATCACTTCATCAATCAATTCTTTTTGGGATAATATCAAAAAGAATTAAAAGCTTTTAGTCAGCCCTTTTGGTTAAGAGGCAAATTCAGTTTTTAGGAACCCCCAGATTAGCATCAAGTGCTCTTTACCTATCCCAGTGATGTTTGACCCTCAATTCATTTGTTAGTGTTTGAATGTTTTACAAAAAGTTGCTTGAGAAGTTAGATACTCTAGCACTCCAGCTTTGCTATTTCTCTGTAACACATCATACTAATTATCAATTTTCTGACCAGTGACTTTGAATTAGTGGGTGTGATCTATAGACTAGATAGTATTTTCTCTCTTTTTTTGGCCTGTTTTCTTCCTTATCTCACAGCTCAATTTTGTGGATGGTTTCTGTTTTCTAAGGTAGATTTATTCCTTTGGAATTTGGTTGTTGGCAATAATAGGAACTGTTTTATAACCTGGATGCGAAAAGTTTTTTTTTAAATGGACTGAAAGTAATCTGAAGAGTTCTTAATTCAGTCATCAGAAGTGCTTTCTTCTGAGCACAGGTGGAGGAAGTTAAGGGGCAGAAAGGAAGAACTGTGTTCCTATAAGCAGCCTGTGGGTTCACCTACCAGCTCAAAACCACGTTATAATGATTCTACTCCTCACTCCATACCAGTTTCTTTCCAAAAAATAGCAACTCAAAATGAGGAACCCTTTTGAAAGAAAATATGGAAATAAGAATTATAATACTTGTACTTTATAATATTTTAGGCTATCAAACTCTTTCCTATCTGCCACTTTTTTCTCCATAATGCTGATGGTTGGACAGAGAACAATGTTCCCTTCTTATTGGTGATAAAGCTGCAGATTGGCAAGAAAAACAAATGACTTTCTCCTAATCACAAAGCAAGTCAACTCATTTGAGACTAAGGTAATAATTGCAGACTGCTGAACAGATTTCTTTGCCATAAACTATGACTTAGTGTTACTGAGTGAATATTTTGTCAGATCTAATCTAAGAATAATACAAAGTCTACTTATTGTACAGAAAATACGCTTCCGAAGTATTTTGTTTCCACTATTTATTTTAGCCAGCTATTTTCTTATGCATATATTGGAAGGTCCGGTCAGATTCATAGGACTTGTGTATTAGGGCTTAGATTAATGAAGCTTTATTTTTACCCCTGTAAAAGTTTTTTTGTTGTTGTTTTGTTTAAAGAATGTCCCCATACTACTGAAACAAAGGGAAACAAGGTCAACAACTCATAATCAAAATTCAATGGTTTTGTAATTTGAAATGGTTGAAGGGAATGTGCTGGGTAAACTGATTATTTTAGTTCCCAGGCGTTCATGGTAAACATGTAAAATTGTTGACATCTCTCAGAAATAGCTCTGTCTCCCAGTTATTTGAATTTGCTTTTTTTTTCTACTTTTCCAGCCATGTAAAATCTGTGTCAAAGGTTAAATATACCTTTGTTCAGAGAGTTAAGAAAAATAATAAGATGTACTAGTTTTTAGTAAGCTCTTTATAAAGAGGAAAGTTGGGCTACTTCATCAGTATATTATGGGCTACTAACAAAAAACATAGTCCAGACTGTTCTAAAAATAGTCAAATAACATTTTTTGTGATTCAGTTCCATAATTGCCTACCCTAATGCTTCTCTGTGATATTGCTAAATAAATCCCTGATGACGTTAAGACTTTACAAAAAGAGCTCTTTAAAAAAAAAAACAAACAGATATACGGTCTTTTTTTTTTTTTTTAACTTTTATGAGCTAACATTGTGATAGGTGCTTTAAGAGAAATATTTTTCCAGAATGATTTTGTAGTAAAAGTAAAGGGCAGCTTTTGTATTGTCATGTCTGGGTGGATAGTCATCTTTCGGTTACTAAGAAATCATGTAGTGTTCCCTAAAGAGAAGCTCAAAAATCTGCTCAGCAGAAAGAAAAGTATTGATTATCGGTTTCTTCATTTTCTCTTATGCTATGTGGTGACCTACCAAATAGATTCACAGGTGTATCAATATCTGTTTGGAGGATACCGATTATGCTTATCATTAGTGGGAACAAAATATTCAGATTCTTCACCATGGTGAAGTAGAGTAGTACTAAATTCCCAATAGAGAATTATCAATTTTACAAAATAATATTTATGTCTCCAGCTGACGTTTTCCTCTCTTTGGGGTGTATTTACTATTTATTTTGTATCTTTGATCTTTTTCTTTGGAAGATTTTACCTATTGCCGTCCTACTGTATTAAATATCCCATACAATGAAATAGGTTAGTAAAGATTTTAAAACCCCACAAATATCCATTTTTGGCTCTTAACACATGGGGGGAACAGTTTTTATAAAAGCACTTCAACATGTAGAAGGGAAAGATAATCTTCATTATGATGATTTCAATTCAGGATCAATAGGTAGTGACTCTGCAAACAAGGGAACACTTACCAGCAGTACTTGAAGACTTGTGAGTTGGGATTGCATGTTACTTGAAAGACCTAATTAAGCTAAATTTTGGTGCACAGCAGTTGTACATGATTTCATGTTTATGTAGCAAAATGCTTTGAAATGTACTAGTTTTGAAAAATACATGTAAAGATAGTTGTGAAAATTGTCTATTATATTTTCCTGTGTGTCTCATTTATTTAGAGCATAAAGTTTCTTTTTTAGTTGTTCTAACTGAATAAGGCTAAATGAATACTGTAATTGAAATTATATTTTAAATCTTTGTCATGAGTTTTTAAAAAAAAAAAACTATTGCAAATTGTATCATTCCTGATTACACAGAACTTTGTGGGTGGTTTTAAATAAATTTTATACTTCTATTTTGCACCTGGTGGTCTAATTTTTCTTTCCTCTTCAAAATCATATTTTTTACATTTACTATCCAATAAAAGTCACATATTTTTAACTACACAGGACTATACGATTTATTTGGAGATAACCAAATATTGCATTGGGTTCAAAACCAAATCAGGATGGCTGTAGCAGAACTCTTGCGTTTTAAACCATTTAATCCCCACAGTGATGCTATTAAGTAAGGGCTCTTACTAACCCCACTTTACATATGAATTCAGGAACTTAAAGTGGTTAAGCTGACACCCCTAGTAATTAGCAAAGCTGTTAATCAACCTTGTTCTATATTGACTCATGCCCTCCCTTGGATTTATCATTATTTTAATAAAACTTAATTCTGAACACAGAATGCTAACATTATTTTAAATTTGACATCCTAAAAAGTTAGTAGCTCAGTCATGTCTGACTCTGCAACCAAGGGACTGAAGCCTGCCACTCCTCTATCCATGGAATTCTCCAAGCAAGAATAGTGGAGTAGCTAGCCATTCTCTTCTCCAGGCGATCTTCCTGACCCAGGGAAGGAAACCGGGTCTCCCTCATTGCAGGCAGATTCTCTACCATCCGAAATGAAAAAAAAAAAAACAAAAAACAAAACACACACACAAAAAAACAAATACGTTTTTAGTGATATTCCAGCAAATATTATAGAAAAATAAGCTACTTTAAATTCATCTTGTTAGAAACCTATTTCTCTGTAGCATCCCAGTAGTCTTCCTTCTAGTGATAGAAACTACTCCAC TCONS_00159275 TCONS_00159277 TCONS_00159278 TCONS_00159280 . 3' 108 TCONS_00159275 TCONS_00159277 TCONS_00159278 TCONS_00159280 . 3' 5764 EMBV3_10913 CGCTCCCTCCGCAGCAGCAAGCAGTGATTTGTATAAGAGGGAAACAAATTGGGACATTTG Gene GeneID:100294918|LOC100294918:XM_002693008:205_cdna Constitutive 0 NULL GeneID:100294918 15 GENE LOC100294918 NULL hypothetical protein LOC100294918 EMBV3_09519 AAGGCGTGCTGGCCACCTGCTACAACAAGACGTCGCCTGGGAGCCCGCGGGAGACGGGAA Variant GeneID:613935|TSSC1:XM_002689964:36_cdna 395^551 2 EMBV3_40675 GeneID:613935 8 GENE TSSC1 MGC128511 tumor suppressing subtransferable candidate 1 EMBV3_09233 GGGAGTCTCTCATCAACCCCGGCTTCAAGAGTAAGAAGCCGGCAAGTGGTGTAGACTTTG Gene GeneID:505435|C11H9ORF142:NM_001100300:17_cdna Constitutive 0 NULL GeneID:505435 11 GENE C11H9ORF142 NULL chromosome 9 open reading frame 142 ortholog EMBV3_22771 GGACATGAGGATGAAGAAAATTCCTTGACTGGTCACCTTTCAATGGATCCAAATGGACAT Variant GeneID:533379|MLF1:NM_001038158:143_cdna 285^368 2 EMBV3_29810 GeneID:533379 1 GENE MLF1 MGC133499 myeloid leukemia factor 1 EMBV3_22879 AGCCCCTCAATTTTTGTGGCAGGAATGTGCTTTCCCACTCCTACTGCTATCATCCAGATG Gene GeneID:504569|LOC504569:XM_002692985:75_cdna Constitutive 0 NULL GeneID:504569 15 GENE LOC504569 NULL similar to olfactory receptor 566 EMBV3_01473 ACTGATTACACCTTCCCACTTGCTGAAAAGGCCAAGGTTGAAGCAAAGGAGGAGTCGGAG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 853^948 11 EMBV3_02396 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_35638 CCCGCCTGGAATGCGGGAACAGGCTGCGCACCAGGACTTTTATGGAAACTTGCTGTTGGA Gene BVV0102_186869 + 0 NULL GK000003.2:67031077-67065045 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173639 TCONS_00173640 TCONS_00173638 TCONS_00173641 1 XLOC_104404 Coding TCONS_00173640 XLOC_104404 Coding Coding NEXN 3:66993435-67054505 j TSS129037 7994 1 TCONS_00173640_4 597 11 0.869279012264815 4.24620217181519e-08 1.28429077967393e-08 4.46820603936317e-08 4.08449140138305e-09 5.28471444423631e-05 1.22099661382374e-11 6.5435732395432e-05 0.000194180882353191 5.09597650296403e-09 2.88376538242173e-12 3.16847168098457e-62 3.67262329568286e-08 1.00048461939641e-08 5.37758415619629e-05 0.000272350174152268 3.90509163608264e-19 0.000218776744766096 0.00147151773295173 2.23786075316754e-09 2.4425358218713e-09 4.70555042031249e-11 0.000117491735983899 1.85477592809743e-21 0.00113946231730331 1.46821122430862e-08 9.34460039208429e-22 8.75015665277456e-11 8.72430777274791e-07 1.0936106431399e-09 0.00252121970151288 XM_005204431.1 NEXN PREDICTED: Bos taurus nexilin (F actin binding protein) (NEXN), 0.0 3846 98.11 0.272204153114836 XM_005271310.1 FUBP1 PREDICTED: Homo sapiens far upstream element (FUSE) binding protein 1 (FUBP1), transcript variant X2, mRNA. 0.0 4156 86.77 0.433324993745309 TCONS_00173640_4 sp|Q0ZGT2|NEXN_HUMAN NEXN_HUMAN Nexilin; 0.0 965 91.24 0.988274706867672 1 coding 0 1 1 1 0.0242714711238661 0.851440275153356 -0.00443251556294282 0.936684598711212 CTCTGCTCTCAGCAGTAAAAGGAAAGTTGGCTGAGGGGCGACGCTTTGGATGAAGATGAGGTGGTGGTTTGGCTACTTAGACCCCAGAACCGATAGCTCAGCTGAGAAGCAGGCCCTAGAGCAAACCGTTAGTGGGTAGAGGGAAGGCAGCTGCAGCCTGTTTCCGAATCCCACTCCAGTAGCTCCCGCTCCTCACTGGGGAGGCAGCTTCCTTTCCCCGGAGCCCGCCGGGACGCGAAGGCGGACCCGAGGGGAGGGGGTCAGCTCCGGGATCCAGAGTCGGGCGACCGGCAGGTCCCGGCGGAAAGTTGGCAGCCACCGCCCCCCTCGCCCGCCTTCCTTCTCGACTCTCCACCCCTCTCTGGGCGATACGGCGGAGGCGGGGGTTGGGGGAACTGGCCTCGTGTTTTGGAACAGCTGCAGCCGGCTCTGGGCCCGCCTGGAATGCGGGAACAGGCTGCGCACCAGGACTTTTATGGAAACTTGCTGTTGGAGCGGGCGGCGGCGGCGGCGGCCAGAGAGATCGCAGCGGCTGGAGTGGCGGCTGGAGCACCCGGACCCCTGCCCACACCCCGGCGCCCGACGCGCACAGCCTCCCCGCGCGCACCCCGGACCTTCGCGTGTCGCTGGCTTGAGGAGGGAGCAGAAAATTACAAAGCTTCATAATCACCCCAAGACCACATAGAGCAAACATGAATGATATTTCCCAAAAGGCTGAGATTAAAGAAATGCTTGCTTCTGATGATGAAGAAGAGGTATCTTCTAAAGTAGAAAAGGCTTATGTCCCAAAGCTAACAGGAACTGTTAAAGGTAAATTTGCTGAAATGGAGAAACAAAGACAAGAGGAACAAAGGAAGAGGACGGAGGAGGAACGAAAACGCCGAATTGAGCAGGACCTTTTAGAGAAGAGGAAGATACAACGTGAATTAGCAAGAAGGGCTGAGCAGGAAGGAGATGAGTCACTGCTTGTAACAGTGGTACCTGTCAAATCACACAAAACCTCTGGAAAAATAAAAAAGAATTTTGAAGATATAGAAAAAGAACGAGAAGAGAAGGAAAGGGTCAAGTATGAAGAAGATAAAAGAATAAGATGTGAAGAGCAACGCCGATCTCTCAAGGAAGCAAAGTGTCTTTCGTTGGTCATGGATGATGAACTAGAAAGTGAGGCAAAAAAAGAATCACTTTCTTCTGGAAAATTGAAACTGACTTTTGAAGAATTGGAAAGACAAAGACAAGAAAACCGAAGGAAGCAAGCTGAGGAGGAAGCAAGAAAACGTTTAGAAGAAGAGAGGCGTGCTTTTGAAGAAGCAAGGCGGCAAATGGTAAATGAAGAGGAGGAAAACCAAGACACAGAAAACATTTTTAAAGGGTACCGCCCTGGTAAACTCAAGCTCAGTTTTGAAGAAATAGAAAGACAAAGGAGAGAAGATGAAAAAAGGAAAGCAGAAGAAGATGCCAGAAGAAGAATAGAGGAAGAAAAGAAGGCATTCGCTGAAGCAAGGAGAAGCATGGTAGTAGATGATGACACCCCAGAGATGTATAAAACAATCTCTCAAGAATCTCTTATACCGGGAAAACTGGAAATTAATTTTGAAGAATTATTAAAACAAAAAATGGAAGAAGAAAGACGACGAACAGAGGAGGAGCGGAAACATAAACTAGAGATGGAAAAACAGGAATTTGAACAACTGAGACAAGAAATGGGAGAGGAAGAGGAAGAAAATGAAACCTTTGAACTGAGCAGGGAATATGAAGAATTAATCAAATTGAAAAGGAGTGGTTCTATTCAAGCTAAAAATTTAAAAAGCAAGTTTGAAAAAATTGGACAATTGTCTGAAAAAGAAATTCAGAAAAAGATAGAAGAAGAACGAGCACGAAGAAGAGCAATTGACCTTGAAATTAAAGAGAGAGAAGCAGAAAACTTTCATGAGGAGGAAGATGTTGATATTAAGCCTGCAAAAAAAAGTGAGGCTCCATTTACTCATAAAGTGAATATGAAAGCTAGATTTGAACGTATGGCTAAAGCAAGAGAAGAAGAAGAACAAAGAAGAATTGAAGAGCAAAAGTTACTACGCATGCAGTTTGAACAAAAGGAAATTGATGCAGCACTACAAAAGAAACGAGAAGAGGAGGAGGAGGAAGAGGGTAGCACCATGAATGGGTCTACCATTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCGTGGTTTAAGAAGCCTCTAAGAAACACATCGGTTGTAGACAGTGAGCCAGTTAGATTTACCGTTAAAGTAACAGGAGAACCCAAACCAGAAATTACATGGTGGTTTGAAGGAGAAATATTGCAGGATGGAGAAGACTATCAATATATTGAAAGAGGAGAAACTTACTGCCTTTATTTACCAGAAACTTTCCCAGAAGATGAAGGAGAGTATATGTGTAAAGCAGTGAACAGCAAAGGATCTGCAGCTAGCACCTGTATTCTTACCATTGAAAGTAAGAATTAATCCCTCTTTGAATCTAGAACTTTCATTCTATTTAAAAATTTCTAAAAAAAAAAAAAAAAAAATCATTTTTCTTCTTCTCTTTTTTAGCTGACGACTACTAGGTCCCCTTCCCTCTCCCTGGAACACACCCTCTCTCTCCGACTTTCTTACTACATCCATCTTTTCTGTGGCGGGGCCAAAAAAGGAAACTGGAAGTGCCACTGTGTTGACTTCTTATTCCTTTCCCTAACAGTCTTCAAAAAACAAGCTCATCTAAAAAATACCTTTTTCCTTTCCAAAAAAGAGCACCAGATTCATCACCCCATTATGCAGTGTAAGTTAATGTGTAATTTAATGGGGCAAAGGGGGGAATTTACTCAATTATTCTATCAGAACCTATTACAAACACTGTGTATTTTTCATGTTTACAGCATTAAGTTTTAAAGAAATTATAAACAGGACACATTTTGCATGAAAAGATTATCATTTATGAACTAGTCACACCTAAAATTAGTCTGAAATAGATGAGTTAGTGAATTTGGAACTTATCAATTTAAGTGGGCTTTTCCCCTCAGTAGAGTATCATTTTGGTTGTTGTAGTTTCAAAGTCTTTCTGGAGCAGGGAGATGAGGGGGAAGGGTTGTCATTTCTCCCTCTATGCAGAGAGAACACAAAACAAGAATTAAGACTTTTAAGAAACAACTGTCAGAGCAAATCTGATGGATACCACTGCCTAATATGGAATGTTGGGAATATCAAACACATATTTTTCAAATCTGTGTAATATATATTCAAGCTTATAAAAAGCAAATTTATGTTGTGACTTTCCTGAGCAAATTATATTTTAATGAGAAAACTTTGTATTAATAGTTCATGCAGGACAAAACATAAAGATTTTCAGATCTAAGAGAATTAGATGTAGGGGAAAATGGCACAATCATCAATTTTGAGTTTTTAAAGTGAGTTTGTAAATAATTAGCTATCATGTTCTATTATCAAGTTGTTTTATATTTTAGTTTTCTGGAAAACAATTTATTTTACAATGTAAACCCATAATAAAGTCACTTCTGTATTTAAGAAAAGAGACAAACACTCCTTAATAATATTCACCAATGTACATTTATTTTTTTTATTGAGGAAACCATAATCAATACAAAATTACAGCAATCATGTACCCCTTTACATACAATGGTATTAAAACAAACTAAACCACAGTTTGTAAAGTATTCAATTTACCTCAAGTCCAAGCTGCATCTCCCTAAGACACTGTTCCCATCACAGTAGCCATTTTAAGCCAATCTTCTTTTTACACGGGTAGTTTCTGTAGAGAACACTTTTCTCAGGACGAAAATGCATTGAGCATGCATAAGAAAAAATATATATATGTGCAAATACATTTATGAGTTCCTATAAGGGGTATCACTGAAGAAAATAAAATCCTGGGACTTATTTGCTTTCTTAAAAGCACCAGTTAAAAAAAAATCCCTCAGAAGTTTATACTGTGGCAAGAAAACTCATGACTAAACAAAAAATAAGGTTATTTTCAGAATCAAAATTATCTTTAGGTATTGTTATAATACATTTTAAAGTGAGGCAGAATTTTCAGAAAATAAAAAGACATCTTTATTAACTAGTAATTTCTACAACCTTATTCTAAAGAACATAACTTTGCAGGTAGAAGTGGTTCTCCTGGCAAGAGTATTCAAACAAACATTATCACTTCTGAATATATTCCTATCTTCCTCTTAAGGTATTGTTTACTCCTACACAAACCCACTCCTGTAAATTAACTACTCAGGTATTTGTCTAAGAATATATTTTACAATGCTCATAAACAACTAGTATTAAATCACTAATTTTAGTATTAAAACCATTTTCATTTATTAAAAATAAAAGTATACTTCCCATTTCTAAGAGAAACATCAAACTATAAGAATTCTAATTACCACCACACTATGAAATCTTAAAAACAAAAACATATTGTCAAGTGCTAAATAAATCAATTTCAAGCCAAACATTGTCTCTACCACTCCTAACACCACTGCATTCAAATCAACTGGCTCACCTTTTCTGCTTTCCATTTATTTCAAGGTTAAGATTAGCGCCATTTAAAAAATGCCTGCAGTATCAATGAAGGCTTATGCTAATGAATAAAAAAATTCTCATGAGATAGAAACAATGCCCCAATATCTATTAGCATTCATATGTATTTTCTTTTATAAAAATGCAAACTACAACTAAGCAAAACTTGACAGGCTCTTAAGGTTCAAAGAGCTCCTTTATATTATCAATTTTAACATTGACTATTAAAACACATATACACACACATAAATGTGGTGCAATAACTAACTTTCAAAATTTAACATTTCATGGAACATTTAAGATCAAGTGAATAGCACTTTAAAATGAAAAGTGATCAAAAGCAGGCACAGTACACCCTGTATCATATTACGTATGGGAAAACATTTCATTTTTCTCAGTTACGATTTGCCAATTTTACCTTCTACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAGGACCTGATTTTATGAGCTATGATTTGGTGCTTGCAGCATCTTCAGCACTGTGTGTGAAAATGAAGGCAGTATTTTTGAATATTTTTCTTTGTTGCAAAGATAAGCAGGAGTTTTAAAAGGATCAGCACATTTTAGAAACCGAATAAACAAAACTGATATGATGCTGCTTTAATACATTCATCTTAACTCAAAATATTTACCAGTTAAAATTATCTACAAGAACACACAAACATTTAAAACTGGCAAAAAATAAAATAAATGCAGCGTCAAGTTATTAAGGTATTATAAATCAGAAAAATATTGGTTGCTATACAGATTATGATAGGTTATTTGCTATACAGTTAACATTTCACTGATGCACATGCCTTTTATCAAACATACTGCCAGTATTTCTTTCGGTGTATATAAATAAGAGTTAGGAAAACTGAGTTGTCTTAAGGAAAAAAGGTCATAATAAAACTCTGACCCATAACGCCCTTACTGAATTGCTATAGTTCAAGAACAAGAAAAAAAGTAAAGACTCCATAGCTTTGGAGAGCAAAGAAAATGTCTTGTCAATCATAAACAGACTGTGAAGGCTGTTGAAGTTTCTGACCAAATGATCTCCTAAATCTTGAGAACTATGTAACTTTCCTTTTAAAATTCTAACAATTTTTCTATATTAGGGAAAAGATTGTAAAAAGTTTGGATGTAGTTTAATTACAGCAGCAATCTACTCTTAATTTTCTTGTTTTAATAAAAAGAAAAATCAAAATAAAAACATCACCTAGAAAAGTAAACAGTTGTTTGAACAACTTACAGACTTTCCACTGAAATGGTAGCATAAATAACAAAATACATTTTGGGGAAGCAGTAGCAGATTGCTTTTGAATACACAACCACAAAAACCTCACAGGGACAACATTAATGTACTGAAATATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGTTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCACTGTGAAGTATAAATAATTGCACTGTTTGCAATTAATAAAGATTTTAAACCTTAAATGAATCAAAATCAACAGCCTCCAATTTGTGAGTACTGAATCCAAATGAAAACTATCTCTTCAGTTTAATTAATAAATGCACCACTTTCCTAAAAGGTCATCTATAAAACAGTATCATGCAAAATACTGAAACTGTTCACATCAATACCCTACTCTTAAACAGATAACTCCTTAACTATTAAAACTTCAAACTAGAACTACATATCCATATCTAAATAAGGGCAAGGGAAGAAGTCACTCTCGGTTCTATAAGATAGTCAAAAACATTTCAAAACAGCTACAATGAACTGTACCGCTATTTTCTACCCTATAAATAATCTCAACATTTATGTCCTGTACATCTTCCTTTTATAGTATATTCAGAACAACCAATGGTGCTCCCCTACCAATGAAAGAACTAGTATACATATTTAGGAAATGGTATTAAAACCACTACATTGCTTAATATTTGCAAACTGAAAACCACCCTGTCTGATACATTTCAAGTCTTTCATATTAATATATAAGATATGCATTATTTTACACTGAAAAGCAATATATTTTAGGAGCACCAATGAGTAATACTATTCAACTTTGTTAATGATGAGTTTTCTTTAGCTATAGCTAAAGCATATCAAAAATACTTACCCATTAAGCTCACTTAAAAAAAAATACAGACCTATGAATATTCTATGTTAAATTAAGAAGCAGTTATGGTTTCCAAGATATAAGCACTGTATTCCAACATAATATTCAAACAAAGTATGGCATTTGCATTATGTGGAACATTGACAAAAAGATACTGTTGCAGTTCATCAATTTGTCATTCTGATGTACTTACAGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCCCTACAGAGCTAGTTCTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTATTTGCATGTAGTCTAATATATTAATATGCAAAGAGCCAACAAATATGCAAAGAGTAAAACAATGGATTTCAACAAAATATCAGAACTTCAGCATGAGTGTTATAGAGTAATAAAATGATTCAAGTACATAAAAAAATTAAGTTGATTCAATGATTGGACTTGTGCATTTACAAAACAAAGCTTATCTATACTGCAAAAAGGAAAAAAAAAAAAGAAAAAAATAGCTCAAACATTTTCATACCGCAATAATGTTTCAATGGCAGATGCACTATAGCTATACTTTTTGCATACTATTCACTTTTTCTACCCTACATTTAGAAAGAAACACACTAATATTGCATACCTTGCAAGAGCTCCTTTACATGAAAAAAAAAATACTGTTCTTATTATAGACTACCCATATTTACTATTTGAAAACTGTTTAAAATTAGTTATGCTGAAACAGTCTTGGAAATCAAGTAATTATCAAATTAAAAACAGAAAGGTTAACTGTTATAGCAGCAGTACAGGTCTGAAACAGTGGTCATGTATAAAAGGAAATTTCACTGTTAATGCAATGGAAGTATGCCAAAAGATCATTGTACACACATGCAGTTTTTAATCAAACAGAAGGAAAAAAATGAAGATATCAGGATTACTTGTGCTGAAAACAGCCAAATACAATAAATGGAAAAGATCCTCCAATCTACTACTATACTGCAAGGGGGAAGAAAACATGCCAGTGTTTAAAAACTCAAATTAATATTTCATGGGGAAAGCTTATATATTTGTGTATATGTATCTTAATTTATCATTACTAAGAAATTATGAATTCTTTAAATACCCACATATCCAACTTACCGACACAGGAGGTTTCATATCATTTATTGTAAAGCACAAAACAGGCATTTTAAAAGTGAAAGTATACATTGAAAAAAGTACATTTATATCACAAAG EMBV3_07725 ATCTGCCCTGTGATGCTGGGTGACGCTCGGCTGGCCTTAAACATAGCGGATGACATGCTT Gene GeneID:319141|GCAT:NM_001075134:16_cdna Constitutive 4 NULL GeneID:319141 5 GENE GCAT NULL glycine C-acetyltransferase EMBV3_09642 GTCGTGCAGCTGTCCTCCATCAGCTTCCAGCCTCCAGGGATCTGGCCAGCCAACTCGGCT Variant GeneID:510813|LGALS9:NM_001039177:233_cdna 481^576 3 EMBV3_24516 GeneID:510813 19 GENE LGALS9 MGC129126 lectin, galactoside-binding, soluble, 9 EMBV3_33729 AAGTACTCTTTCTCAGGTGGGTGAGCACTTCCTGCCCAAATGCCGAGTTCGTGTTCAAGG Gene GeneID:782102|LOC782102:XM_002692766:127_cdna Constitutive 0 NULL GeneID:782102 14 GENE LOC782102 NULL similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 EMBV3_22959 CATGGCGAGTTCAGCAGTGAAGTACCTGAGGCATATCCCCCCACGTCCTTGTCCAGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08610 ACTCAGTTCAGGCTGTAGGGGTAGGAGGCTTTAGGACTGGATACTTCACAGATGGCCTCC Gene BVV0102_314941 - 0 NULL GK000013.2:5615308-6744016 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35339 GCGGTTTTCCCAAACAGCCTAGTGTCCGCTGCAAGTCCAAGGGCCAGAACCCTGAACTCT Gene BVT0102_355454 + 0 NULL GK000010.2:87888066-87913080 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156271 1 XLOC_094953 NonCoding TCONS_00156271 XLOC_094953 NonCoding NonCoding LOC100847563 27:26367813-26376519 = TSS116742 695 1 TCONS_00156271_3 175 3 0.920505456634118 0.0313837031314053 0.0125656897919065 0.0180705881313409 0.0184157966941649 0.0194331705464273 0.0153389414150664 0.00276722876076158 0.00571233179564557 0.00402647347816548 0.00139813489269396 0.00117835777302175 6.82309096465563e-05 0.000951832018406531 0.00177039931473928 0.00143024188324341 0.0471803228482126 0.0109253395540271 0.0196290940395567 0.000146420115432951 0.00563316744828716 0.00152991160821036 0.00431117633377439 0.00767086423129098 0.0155180536552766 0.000948044439462052 0.00541163080678381 0.00270398587924823 0.00101504239834771 0.00143845493404413 0.00134676653359617 XR_232853.1 LOC101909421 PREDICTED: Bos taurus uncharacterized LOC101909421 (LOC101909421), 0.0 1014 98.96 0.831654676258993 0 noncoding TTTTACACGTTCTAATTATTCGGTTCCAAAACACCAAAACTTGTACTGCACACGGTCCCCATGGAAAGGCCCCCTCAGCAGGACAGCCACAGATGCTGCCATGAAAGGGCAGCAGGGTGCCCTCCTCCCTTGTTTGCTGCCTGGGCGGCCACCGGGTTTTGAAACCCATGCACCCTACTAAGTTTCTAGGGTGCAATTCGTGGACCCTTCCCTTTCCCATCCCAGCAGGTGGTCAAGGGCCCGCTGGCCTCCAAAGTGCCAGAAGCAGGGCTGGGCCAGCCGGCCAGAGTTCAGGGTTCTGGCCCTTGGACTTGCAGCGGACACTAGGCTGCTTGGGAAAACCGCGCGGCTCTGACCTTTCAGCAAAGGGGTGGAGCGGTCAAGGCCTTGAGCCCAAAGGCGAGGCCTTTCTGCGACCGCCAGGTTGTGCCAACAGAGGGCGGACTACGTGGTTCCCTGCTCCACGCAGTCCCAGTTCCCTGACCTGTGGTCCGCACCCCTCCGCCGCGCCCACTGGATGCCGATCCTTGGGGACCCAGGAGCGCACGCAGTGGGCGTTCCCAGCCGCCACGGAGAGCCTCTGGGACCTCGCTCCCCGCCCGGTGAAACGGGAGGACCATCCATCCAGCCCACAGAGGCAATCCAAGCTGTCTAGAATTCAGGGATCCAACGAGGACTACGGAAAGGAAAGATGA EMBV3_03589 CAGTGCCTCTTTAAACGCTTTCGTTATCTCCAAGGCAATCTGTCCGTGGCATTGCTCTCG Gene BVV0101_065984 + 0 NULL GK000010.2:37405104-37412299 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016851 1 XLOC_008925 Coding TCONS_00016851 XLOC_008925 Coding Coding EHD4 10:37409390-37497536 = TSS11668 6430 1 TCONS_00016851_7 540 0.0816485225505443 6 0.927120086221567 0.000751837614199018 6.31930767747961e-05 0.000226524734620645 0.000110193264972241 0.000132635616825531 0.00015037758554239 0.000338133519619234 0.000152605489539708 0.000230867539590145 0.00038372041206061 8.35452920368179e-05 5.13459493838994e-05 1.20209567281428e-05 0.00024653852621571 7.42450718715523e-06 0.00346677616393132 0.00087787996843437 0.00166361952142492 0.000219298303491964 0.000164789794856818 7.39376187798564e-05 0.000957107739226128 0.00123559626146382 0.00152350560346399 0.000303956791333266 0.000422321784893752 0.000168577871547169 0.000278057206698859 0.000212425248886089 0.000443009038693124 NM_001192053.1 EHD4 Bos taurus EH-domain containing 4 (EHD4), mRNA. 0.0 3961 100.00 0.341368584758942 NM_139265.3 EHD4 Homo sapiens EH-domain containing 4 (EHD4), mRNA. 0.0 2634 80.56 0.433125972006221 TCONS_00016851_7 sp|Q9EQP2|EHD4_MOUSE EHD4_MOUSE EH domain-containing protein 4; 0.0 1056 94.45 0.998148148148148 3 coding 0 0 0 0 0.0214680460372679 0.884355341552201 -0.00234087393238913 0.971542906506423 GATGACCAGACATCTGCATTTTAACAACCATCTCAAGTTTTCTTATGCAGGTACTCCCTTCCCCACCATCACCAGCACCACACTTAGAGAAATGCACAGAAACAGAGACATTCTAAAACTGTAACGTAGGACACCAAAAGTGATGGCTGATTATTTCTCCCTATCTCAGTTTAGATATATCCTTTAGTTCAGTTCAGTCGCTCAGTCGTGTCCGACTCTGCAACCCTATGGACTGCAGCACGCCAGGCTTCCCTGTCCATCCAGCTCCTCGAGCTTGCTCAAACTCATGTCCGCTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGCCGTCCCCTTCTCCTCCTGCCTTAAATCTTTCCCAGCATCAGGCTGTTTTCCAATGAGACAGTTCTTCACATCAGGTGGCCAAAGTATTGGAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGACTGATTTCCTTTACGATTGACTGGTTTGATCTTGCAGTCCAAGGGACACTCTAGAGTCTTCTCCACCAATGTATCCTTATCACCTGAGAGACTGTTACAGGCTAACAGTAACTCTTTTTATGTCAATATGTGGCAGTGAGGTTGTAATAATGAGGATAACTAAACCTTCAAATTTACAGAAAATCACACAAAGAAAATTAAGGGCAAAAAGCCTTCACTCGATTCAGAAGTTTGTGGAGGCAGCGTGGAGAAACATTTACCCAAGTAGATTGAAGTCTACTATCCCAACTTCAAATTTGGTCAATTACGTCTTTGAGTCAGGGTTTCCTCACAGATAAAGTCAGAGTAATAATAAGCTGCCAGTAGGTAGAAAGAACTCTCCTGTTAACTTTTTTAACTTTTGTCCCCAGCATCGTAGGGCTGGGATGAAAAACATCCCAGGAGACTAAGCAGCCTCCAGAGGCGCGCGCGCGCGCGCGCGTGTGTGTCTTTCTTTGCCGGCTTGTGTGAGTATGTTTCTTTGCCAGCTCAGATTTGCCCAGAAATCTACGCCACCTGGCTAGAGGTGGGGCGCGGGCAACCAACCACACCCGGCCCCTCGGTTCGCCGGGCTGCGCTGGCAAGTTAGAGAAACACCCTCTTCCTCGCCCAGTCCTCCAGAAAGACTCCGTCATCAACAATTCATTAAGACACTCGTCTCCATTGGCTGGCGCCTCCACTCGCGCCGGCAGCGGTCCAATGAGAAAGGACTTGAGAGACCCTTCTGAATAATGAACACGCTCCCGTGACGTAGCGACCGGAGACTGGCTGAGATGGCGCGAGGCGGGGCCAGCTCGGGTGGCGGCGAGGGCTGTTGGGGCTGCTCAGTTCCAGCTGGGGCGGGTCGAGCCCGGAGTGGGGTCGGAGCTCGGGACCGGCACTGAGAGGGCGAGCGCGGGGCACAGACGAGCGGGCAGGCGGCAGGATGTTCAGCTGGTTAGGGCGGCAGGCGGGCGGGCGCGGAGGTACGGGCGCGGACCCGGTGCAGACCGTGACGGGTGGCCTGCGCTCACTCTACCAGCGCAAGGTGCTGCCGCTGGAGGAGGCGTATCGTTTCCACGAGTTCCACTCGCCGGCGCTGGAGGACGCCGACTTTGAGAACAAGCCCATGATCCTGCTGGTGGGCCAGTACAGCACCGGCAAGACCACCTTCATCAGATACTTACTGGAGCAAGACTTCCCAGGCATGAGGATCGGGCCAGAGCCCACCACCGACTCCTTCATCGCTGTGATGTATGGGGAAACCGAGGGCAACACCCCAGGGAACGCTTTAGTCGTGGACCCCAAGAAGCCCTTTCGAAAGCTTGGTCGCTTTGGAAACGCTTTCCTCAATCGATTTATGTGCTCCCAGCTGCCCAATGAGGTCCTGAAGAGCATCAGCATAATCGACAGCCCCGGCATCCTGTCTGGAGAGAAACAGCGCATCAGCCGAGGGTATGACTTCTGCCAGGTCCTTCAGTGGTTCGCTGAGCGGGTGGACAGGATTATCCTGCTCTTCGATGCACACAAACTGGACATCTCGGACGAGTTCTCAGAGGCCATCAAGGCCTTCCGGGGCCAAGACGACAAGATCCGTGTAGTGCTGAACAAGGCCGACCAAGTGGACACACAACAGCTGATGCGAGTCTATGGGGCCCTCATGTGGTCCCTGGGCAAGGTCATTAACACACCTGAGGTGCTACGCGTCTACATCGGCTCCTTCTGGACGCAGCCCCTGCAGAACACTGACAACCGAAGGCTCTTCGAGGCCGAGGCCCAGGACCTGTTCAGAGACATCCAGAGCCTTCCCCAGAAGGCGGCAGTGCGCAAACTCAATGACCTCATCAAGCGAGCGCGGCTGGCCAAGGTACATGCCTACATCATCAGCTTCCTGAAGAAGGAGATGCCAAGTATGTTTGGAAAAGAAAACAAGAAGAGAGAACTTATCAGCAGGTTGCCAGAAATCTACATTCAGCTACAGCGAGAATACCACATCTCTGCAGGGGACTTCCCCAAGGTCAAGGCCATGCAGGAAAAGCTTGAGAACTACGACTTCACCAAGTTCCACTCGCTGAAGCCCAAGCTGATTGAGGCCGTGGACAACATGCTGACCAACAAGATCTCGTCGCTGATGAACCTCATTAGCCAGGAGGAGATGAGCATGCCCCCGCCGCTCGTGCAGGGTGGCGCCTTCGATGGCACGGCCGAGAGCCCCTTCAACCAGGGCTACGGGGAGGGCGCCAAGGAGGGCGCCGATGAGGAGGAGTGGGTCGTGGCCAAAGACAAGCCTGTCTACGACGAGCTCTTCTACACCCTGTCACCCATCAACGGAAAGATATCAGGCATCAACGCCAAGAAGGAGATGGTGACCTCCAAGCTGCCCAACAGCGTCCTAGGCAAGATCTGGAAGCTGGCTGACTGTGACGGCGATGGCATGCTGGACGAGGAGGAGTTCGCACTGGCCAAGCACCTCATAAAGATCAAGCTCAGCGGCTATGAGCTGCCCAGCAGCCTGCCCCCCCATCTCGTGCCGCCCTCCCACAGGAAGTCCTTGTCCAAGGCCGACTAAGGGGCAGACCACGCACAGGGAAGGCAGTGTGGGGCGGGAATCAGGGCAGCCTGGGCCCGAGGCCCACTCTGTCACCAGCTCACTGAGTGACCCTGGGCGAGACACTGCCTGCCCTGTGCCTCAGTTTCCCCATCTGTAGAATGGGAAGGGCAGACACTGGACCCTAGATCAGGTCCTTTTACCTTAAAATTCCCTGAGTTTCTATTAAAATACTGGGGAGAGGGGATGGATATGAAGTTTGAAGGGTTGAGAACAAAGGGAGATTCTAGGAAGGCTTCCAGGAAGTCCTTGGAAGCCTGGAGAAACTCGGATATGGAATCCCAGGAACCACAGGGAGCGAGCTGGGGGCACTGCTAGGCTCCACTGAACTGTTCATTGTTATGAGCCCAGCTCTCCCTCAGAGAGCAACGGGAGGCAGCAAAGACCAGCTTATTTATTTTGTTCCCTGCTTAATTTAGAGTAAAAAAAAAAAAAAAACAGCAGAGGTTTCTGTTCTCTCCAAACCATCTACCAAAGAGAAGAGGGCTGCCCCGGCTTTGAGGGAAGGACATGCCTTGTCTGCACGTTCCCGTCCCTCTGCTGGCCAGTGGAGCAGGCAGCCAGGCCACAGGGAGTGTCCCCCACAGCATCCACTGGCCGGCCTTCCCAGGGCTCCCCCAACCCAAAGCCTTCCCAGCAAAGTTGTATTTGGTTAGAAATTTGGAACTCACAACCTTTACTAACCCCTGGCGAGATTTCTAGTATTCTAGTCACATTGAAATCTGAAGATGAGCTTTACTTGTCTGTCCAATCGTTTGTAGCAAAGACTATTTAAACTAGAGGAAGAAAAGAGGTGGCTTTCCCCAGTCCTCAGTTAGCGTGGTCACATGTCTCCAAGGCTCTTTGGTCGATGACAGGATTTAAATTCAGCAAAAACATGGCTTGGTGCATGTCCTGGCCCTGTGGACACAAAGGGAGTGAGGGGCCTGCCCACCCTCACTGGCTAGAAGGCAGAAGAAGTCGGTCTACTAGTGTTAGAAACTATTTTTGTAACAAGAAAATGGGCATTTTTATCATGTCCAGTTTTTAAAATACAGTTTCTGTATAAAGGATAAAGGCCTTTATGCAGAAATAAGATGGAATCTCTCATATAAAGCCTTTTCTTCAGAATCTATGTGGTTCGTACCATGGGTGCCTCATGAGGCAGGGTTTGGGCACTTAGCTGTACATCAGCTCCTGAGTGTTCTCTCTCCCAGGGCCCCGGTGTGAACCTCTCTGGACCACTCACCCAAACGCCTGTGGCAAGTGGAGATCAGCCTCTATGTGGGCTCCAGCTGCGGGATGCAGGTGGCTTTCCTGACCATTACTTATGCAGTAAGAGAGACATGGTATTTCATCACTATTGTGATGGCCACATAGCCTGGAACCTGCCGGCACCAAAAATGAAGGCAATCCAAACAGCCCCACCCAAGTCTTCCCAAAACCACATTTTTTTCCCCCCCTGATGTTATCAAGGGCAGAACTGCAGATTTAAAAACATTTATTTTAGAGAAACATTTACCCAGATGCCAGCCCTCACGCTCCCTAGCTTACTTTCTAAATAATTTAGCTTTAAGAGAAGTAAATACATAACATGGTTTTAGTCTTAATGAGCACTTTGAAATTAATTAGACACATAGAAAAGAGACATTTGTAATTCCAGTACTGTAATCTGAGCAGATGGTTCTGTAAACACCTGAGGACCACCCAGGCATGTGAGCACAGTTGATTCCAGCAAAGGACAAGATTGAGAGAGAAGGAGAGAGAGTTCATTTGTCCAGAGGTTTGGAGATGCCAGAGTTAGCTGATTTCCACTCAGATTGATCCTGCTATGTTCAGCTGTCGTATATAAAGATAAATATATACACATATGTCCTGAGTATATATTTTTGGCACTTGTTAATGTGTGTATATGTAGATTTTGTCTATATACTGACTTAGAGGAATATTGTTTTAGAGTAGCTGGAGAGGAGGTGTTTCTGATGCTATGAGGATAGAAACATCTCATGGGTGATCCCCACCCCACCACCCCATGACCTCTGGCAGGAGACCACCTATCAGCTAAATGCTGAGAAAAAAATGAAGAAAAAGGAATTTGTGTGTGCATTTTTGTTAATATCTTCTTTAAAAACCTGAAGTCACTCATCGTGAAAAGTTGATGGGAAAGAAAAACACTGGAAACTATTAGGAATGGCAGCCAAGTGAGGACCCTCATCTCCCCAGGACCTGCACAGAGTTCCTTGAGTCTGGATCCAAAACACCCGTTACCCCCTGGCCATGTGCAGCAGGGCTGGTAACACAGACCCCTCAGGATCTGGACACCTTGGCCGACTGTGTTGTCCTCCCAGTACCACCCGACTGTCCAGGAGCCCCCTCCCTAGAGCACTCACGGATGGCTGGGGGTTGGAAGCAACTGAACTCTAGAACTCTAAAACTCTCCATGCTGTCTATGACTCCACAGAAGAAAACCTAAGAATCTCAAGTCTGTTTTATGTACAGCTCATGATCACAGAGTTCAGCTCTGTGGCCACACGCTGATGTCCAGCCTGCTTGGCGTCCTGCGTGGATTCTTTGCTCGCCACATGCTTGGATGGCCCGGTGAGGGCGGGGGGGGGGGGGCACTCTTCCGTGGCGAGGGCCGTGCATTCAGTTGTCTTTTGCTTCTCTGGGGCTGAACTGGCTTCTCTGGAACACTTGTCATCGTGCAACAGGAACGCTTGGATTGAGGGCTGTGGCCCCTCCCACAGAGCGGTGGGCCTTAAGGAGTTGGATTCTTACTCCATTTCATGGGACTGGTGTCCAGCTGGGTCAGAGAACATGTGAGAAGAAGCCAAATGCCTTGTGCTCTCCTCCAACCGCCACTCCGCTTACAGGCCCACAGGAAAGGCCTCAGCAGAGCCCTGGCCCCACTGCTCCAACCACGGCCCTTCCCTGTCCACTGGGTCTCAGCAGCCGCCCCTGTAACACTGGGGGTGTCTTGTGCTGGAATCCACCATGTAGGATGGGGTTTAACCACCAGAGTCATGGCTTGACAGCCACCACTGGGACCTTTCCACTTGGCAGCTCTGCTCCTTCCTGATGCCCAGAGCAATGCCACGGACAGATTGCCTTGGAGATAACGAAAGCGTTTAAAGAGGCACTGTTTATTTCCTCCATGGAATGTGGCGGAAGAGTAACTTTCTTAGGACAGATAACCAGTGCGTTTTTTTTCCAGGTAAACATGGGCCGAATTTAAGTGTACCAGGCGACATGTTAATTAGCCAAAAAATGCTATTAATACACAATGCTTCTATTTTTTTTGTAATCTTGTTTCAAAATGTCAAAAAAAAGACAGTCTACTGATCAATAAACTTCTGAAAAAAGTCACA EMBV3_26764 TCTTTCTCCTTGGGGGCAGAAAGACAGATAACGTGAGTTCATTTCTTCCATCCCCAGGCC Gene GeneID:529388|UBL4B:NM_001080734:137_cdna Constitutive 0 NULL GeneID:529388 3 GENE UBL4B NULL ubiquitin-like 4B EMBV3_23626 GCCCTGCTGCACACCCACCAAGATGTCCCCAATCAACATGCTCTACTTCAATGACAAGCA Gene GeneID:540517|GDF11:XM_002687421:165_cdna Constitutive 0 NULL GeneID:540517 5 GENE GDF11 NULL growth differentiation factor 11 EMBV3_11431 AAGAGAGCCTAGAACCTTTCTTCTCTGCCAGGGCTCCGTTGTGTTTGCTCGTCGGTTTCG Gene BVV0102_208545 + 0 NULL GK000019.2:11460149-11490918 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095143 1 XLOC_057654 Coding TCONS_00095143 XLOC_057654 Coding Coding - 19:11458852-11463428 - TSS71027 436 1 TCONS_00095143_1 69 3 0.905355191256831 0.00259985841655435 0.00240458679523141 0.0037578154492364 0.00303984090332921 0.00168140820217656 0.000632358724883615 0.0022828020103658 0.00162052333587488 0.003528581347979 3.56575984225073e-176 3.28804349211604e-91 7.16251225022872e-05 0.000195917574407553 0.00020480588468452 4.56300549443354e-05 1.01731929987673e-35 3.20227850994571e-184 1.25816247469812e-83 0.00205296610886597 0.00201053907321009 0.00104795217443478 0.00127292745526907 3.72593943119199e-138 0.000278639000249165 0.00350479693647619 0.00415767855523726 0.00233552185605195 0.000186982440341585 4.47164269342966e-177 1.20127702586314e-131 XM_002702083.3 BRIP1 PREDICTED: Bos taurus BRCA1 interacting protein C-terminal helicase 1 (BRIP1), mRNA. 5e-114 414 99.57 0.529816513761468 NM_032043.2 BRIP1 Homo sapiens BRCA1 interacting protein C-terminal helicase 1 (BRIP1), mRNA. 2e-81 306 88.33 0.527522935779816 TCONS_00095143_1 sp|Q9BX63|FANCJ_HUMAN FANCJ_HUMAN Fanconi anemia group J protein; 4e-35 128 91.43 0.971014492753623 0 noncoding 0 0 0 0 -0.00733963228749993 0.953215581910156 0.00255690222535039 0.958811862620209 CAGAGAGCTGGAGTGGAGAAAAGGTGAAGCGGTCGCGAGCGCTCTACCGGCCCGGGAGTCGCAGCTCCGGGAGGAAGAGAGCCTAGAACCTTTCTTCTCTGCCAGGGCTCCGTTGTGTTTGCTCGTCGGTTTCGGCTTCCTTTTCTCCGTTAGGAATCTGAAGTAAACAAAGCATGATGTCTTCAGCTGAATATACAATTGGTGGGGTGAAGATTAACTTTCCTTGTAAAGCTTATCCATCACAGCTTGCTATGATGAATTCTATTGTCAGAGGATTAAATAGTAAGCAGCACTGTTTATTGGAGAGCCCCACAGGGAGTGGGAAAAGCTTAGCCTTACTTTGTTCTGCTTTAGCATGGCAACAGTCTCTTAGTGGTAAGTAGTTGGTTGATATTTTCAAGTTGCTTATTGGGTCCTGAAAAAAATCCGATGAAGT TCONS_00092243 TCONS_00092244 TCONS_00092245 r 3' 2249 TCONS_00092245 r 5' 0 EMBV3_11620 GGCAGCCCTTGCAAACCCAACTGCTTCCAATACAAGAAAACTTTGACCTCAGGGAATGTC Gene BVT0102_168215 - 1 EMBV3_16273 GK000029.2:23767672-23839044 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179222 TCONS_00222879 2 XLOC_108995 XLOC_136186 NonCoding TCONS_00222879 XLOC_136186 NonCoding NonCoding - 7:89227210-89227947 - TSS166877 737 1 TCONS_00222879_1 53 1 0 0.00100050954617857 0.000680194781469593 0.000358178751575428 0.000236093707988426 0.000207682062341614 0.00175745203406771 0.000141101285319088 0.000526441520476249 0.00022001869013716 5.01480140787329e-05 0.000272777559993907 3.91437802596728e-05 9.99643011264801e-05 9.85954701675827e-05 0.000128820724260436 0.00685152228902861 0.00135763161361362 0.010688372337922 1.49958050059485e-05 0.000166281691307434 0.000344559041449137 0.000279289637509927 0.00390081107915644 0.00517535055852645 0.00011556201151511 0.000390061449422375 0.000203759167545689 0.000207418548725291 0.000279905694800211 3.26974145228294e-05 XR_235597.1 LOC101907604 PREDICTED: Bos taurus uncharacterized LOC101907604 (LOC101907604), 0.0 1175 99.10 0.902306648575305 0 noncoding 0 0 0 0 -0.0409444288977897 0.696907786851441 0.0714231620702196 0.222086856962468 CCTTCACCACGGGCTCCCGGTGAGCCCCGCCCCCACGCCCGGTTCCAGGAGAGCCTCTGGGAGCTCGCTCCCGCCGCCCGGTGAAACGGGAGGACAATCCATCCAGCCCACAGAGGCAATCCAAGCTGTCTAGAATTCAGGGATCAAACGAGGGCTACGGAAAGGAAAGACGACCTGACCTAGGAGGGCCATGATATTCTATAGAACCGGACAAAGTTGGTTTCCAAGGAAACTTGATTCCTTGGAACTCGGAAAGCTGGTTCTTTTCATATGCAATTCCAAACCATGAGCTCCTTCCCAAAGCCTGCCTGGCCGCCAGCCCCACCCCCCACTCCCCAGAAAAAACGGCTCAAAGAAATCTTTTCCATCTCAGGCGGAAAACTGGAAGATGTCTTGTCTTGTCTGTCTGGATTGATGTCTGTGTCAGTGTGAGCCTTGTGATTTTTGATAATAGTGCTCAAGTTCTGAGTTCTTATTTCAATGGTCTCAAGACAAGGCAGCCCTTGCAAACCCAACTGCTTCCAATACAAGAAAACTTTGACCTCAGGGAATGTCAGAGTCCCGTGAACTGGGAACTAGTCAATATGAAATATCTAGTAGTTTTCTTTTTGCTCCTCTACTGTAGACATGTCTAAGAGTCATCAACAAGAAGCACAAAATGTTCATAGTGCCTCGGTTTGTTCTAAGGTAAAAATTGTAATGTCGTTCTATCTGTCACAAGCTTGTCAACGAGAAAG TCONS_00214501 . 5' 53055 TCONS_00214501 . 5' 53055 EMBV3_17768 TGACGAGGCTTCCGTGGGCCGTGCCATCAGTGCCCGTTGTCTTATCACTCCTAATAATTT Gene GeneID:530116|DAZL:NM_001081725:17_cdna UTR3_Alt 2 NULL GeneID:530116 1 GENE DAZL NULL deleted in azoospermia-like EMBV3_22543 TCAACAGCATCGATTCAGAGGCCAACCAGGAGAAGTTGGTGCTGATAGAGAAGAAGCAGC Gene GeneID:519045|SHROOM4:XM_002700084:176_cdna Constitutive 0 NULL GeneID:519045 X GENE SHROOM4 NULL shroom family member 4 EMBV3_29579 CTTCCTGACCTTGGATTAGGCAATGGTTTCTGAAATAAATGACACCAAAGCACGAGCAAC Gene BVT0102_242208 + 0 NULL GK000004.2:87295627-87301468 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184743 TCONS_00184740 TCONS_00184742 TCONS_00184739 TCONS_00184738 TCONS_00184741 TCONS_00184744 1 XLOC_111418 Coding TCONS_00184743 XLOC_111418 Coding Coding AASS 4:87298437-87378977 j TSS137498 4864 1 TCONS_00184743_2 450 0.489103618421053 12 0.93975589465973 0 4.12304793332586e-06 0 0 0 0 0 0 1.94590832156162e-05 2.78263985773939e-07 0 0 5.8739656996333e-07 3.86437732946189e-06 0 0.00225924555479251 0.000606394452664114 1.23191885241707e-41 0 2.95095283541408e-06 0 0.00111222211479377 1.00779248600067e-10 0.000426964992860521 1.52813252131927e-06 0 0 2.52576880325336e-05 8.32453114454983e-10 1.48528606249273e-05 NM_001109797.1 AASS Bos taurus aminoadipate-semialdehyde synthase (AASS), mRNA. 0.0 3153 100.00 0.359169407894737 NM_005763.3 AASS Homo sapiens aminoadipate-semialdehyde synthase (AASS), mRNA. 0.0 2013 86.83 0.343133223684211 TCONS_00184743_2 sp|A8E657|AASS_BOVIN AASS_BOVIN Alpha-aminoadipic semialdehyde synthase, mitochondrial; 0.0 913 100.00 0.997777777777778 1 coding 0 0 0 0 0.0592974725568096 0.790628354639455 -0.0185723921029263 0.719748348158728 TCACCGCCTGCATCCCAATTTCGGCTGGAAATTTGGAGCCTCCCCTCCCAGGGCCCGGGAGCTCACAGGCGGCGGGGACCGGACGAGGGAACATGCTCAGTCACTTTCAATGGGCACCAAGAAAAAGGTCTTGGTTCTTGGATCTGGTTACGTTTCTGAGCCTGTATTGGAATACCTGTTGAGAGATGACAGTATTGAAATAACAGTAGGTTCTGACATGAAGAATCAAATTGAACAATTAGGCAAGAAATATAATATTAATCCTGTTAGCCTGCACGTTGGTAAACAAGAAGAGAAGTTGAGCTCCTTGGTGGCAACACAGGATCTTGTCATCAGCTTATTGCCTTATGTATTGCATCCTCTTGTGGCCAAGGCATGCATCGCAAGCAAAGTTAACATGATCACTGCAAGCTACATCACCCCAGCGCTAAAAGAATTAGAAAAGAGTGTGGAAGATGCTGGCATCACAGTCATTGGTGAATTGGGATTGGACCCTGGTCTTGATCATATGTTGGCAATGGAAACAATAGATAAGGCCAAAGAAGTGGGAGCCACGATTGAATCTTATGTTTCCTACTGCGGTGGCCTTCCAGCTCCTGAATGTTCAGACAATCCTTTGAGATACAAATTTAGCTGGAGTCCAGTGGGAGTTCTGATGAACATAATGCAGCCCGCTACCTACCTGCTCAACGGAAAGGTTGTGAATGCTGTAGGAGGTGTCTCCTTTCTGGATTCAGTCACTCCCATGGATTATTTCCCTGGATTAAATTTGGAAGGTTATCCTAACAGAGACAGTACGAAGTATGCTGAGATTTATGGCATTCCATCTGCTCACACTTTATTACGAGGGACACTGAGGTACAAGGGGTATGCCAAAGCTTTGAGTGGATTTGTGAAGTTGGGTCTCATAAACAGAGATGCGTTTCCTGCCCTTCAACCTGATGCCAATCCGCTCACCTGGAAAGAACTCCTCTGTGATCTAGTTGGGATTTCATCCTCTTCCAAATGTGATGTGCTTAAGGAAGCTGTCTTTAAGAAACTGGGAGGAGACACAACCCAGTTGGAGGCTCTCGAATGGTTAGGGCTACTCGGGGATGAACAAGTCCCTCAGGCCGAGTCTCTCGTGGATGCCCTCTCCAAGCATCTGGCCGTGAAACTTTCCTATGGTCCTGGAGAGAAAGATATGATTGTGATGAGAGACAGCTTTGGAATCAGACATCCTTCTGGACATTTGGAAAATAAAACTATTGATCTTGTGGTTTATGGGGATGTCAATGGTTTTTCAGCCATGGCTAAAACTGTGGGGTTACCCACTGCTATGGCAGCCAAGATGTTACTTGATGGTGAAATTCAAGCTAAAGGCCTGATGGGACCCTTTTCAAAGGAGATCTATGGACCAATATTGGAGCGAATTAAAGCAGAAGGCATTATGTATACTACACAGAGCACAATCAAACTATAATTGAGAATTATATTTTGTTTTGATCTTCCCAGCCAACACAGCTCTGAACTTCTGTGCAGCAAGCATGCTTGTTAATGTGATATTTTAAAACATAAAGCATGATATGTTTTGATATGTCAATACAATGGTGTTTTTGAAATATAAATCTCTATTTTAATACGAAAACATTTGTTATAAGAGATGCCAGTAATTATCAGAGAACTTTAATAATTCTATCATGTATTTTTTTCATGTGTATGTAAAAATGATAATGCTTGTACTACTTGTTAACTTATTATGCAACTTTTTTTCTTACAAGAATATATTTTCCTATAATTAGCAGGGGAAGTTTTATCTTTTTAGTAAGAAGAAAATTTCTTCACACAGCTTTATTTTTGTTTTGCTCTTGTTTTTCAGGCTGATTCAGCTGGATGTTTCTAGATTACCTGTCTACAAGCTTTTGCAATAATGCTATTTTGTGCCTTTTTGTAAAATTATGATTTAAGAAAGTGACATTTCTGATAGTTTCCTCTTTAATGTTTAGAAAAGGAATAGGTAAGATTAAATCAAAATCTACAGGATCAGCCCATTAGGCACAGGAAAAGAATCTAACAAATCTAAGATTCTTTTGTGATAAAAAGCACTCAACAAACTAGGAATAGAAGGGAATTCTTTGACCTGATAAAGCGTACCTATGAAAAACCCAGAGCTAATATCATACTCAATGATGAAAGACTGACGGATTCTCCCCTGAAATCAGGGACAAGACAGAGATGTACACTCATGCCATTTCTATTCAGCTTGTACTGGAAAGTCTAGATGGGGCAGTTAGGCAAGAAAATGAAATAAAAGACATCCAGATTAGAAAGAAAGATGTAAAACTATCTCTGTTTGCAGATGATATAATCTTATACATAGAAAATGCAAAAGAATAATCTAAGAAAACATTAGATCTAATACATGAGTTCATCAGTTGCAGGATACAAGATTAACATTCAAAAATTGATTGTACTGGTACACAGTATCAATGAATAAAGCAAAAATGATATTAAGAAAACAATTCTTAAAAAAGTGTAGAATAGGAATAGAATGAGAGTTCAGAAATAATGCTTATTGACTTTTGAAAAAGGTGCTAAGACAATTCAGTTGAGAAAAATAGTCTTTTCATCAAATGGTGCTGAAACAACTGGATATCCACATGCAAAAGAATAAAGTTGGACTCCCTACCTCACAGCACATATAAAACTTATCTCAAATTGGACCAAATACCCAAATATAAGAGCAAACACTGTAACACTTTTAGATGAAATCACAGGTGTAAATCTTCCTGACCTTGGATTAGGCAATGGTTTCTGAAATAAATGACACCAAAGCACGAGCAACAAAAGGAAGAAAATAGATAAATTGGATATCATCATGATTAAAACCTTCTGTGCTTTTAAGAATACCATCAAGAAGGCAAAAGACAACCCACAGAATGAGAAAATGTTGCAAATTATATATCAGGTAAGAGAAGAACTTGAATAGATAGAGAACTATTGTATTCAATAAAAAGTCAAACAGCCTAATTTAAAAAAAAAAAGGATAAAGGATCGGAATTGACAGTTCTCAAAAGAAGATATACAAAAGGCATATGAGCACATGAAAAGATGCTTAACACACGTTAGCTATCAGGGAAATAGAAGTCAAATCTACAATGAGATAGCACTTCAACGTCACCTGGATAGCTACTGTGAAAAAATAGTAAGTGTTGGTGAAAATGTGGAGAAATTGGAACCCTCATAAACTGCTGGTGGAAATATACAATGGTATGGCTGCTTGGAGAAACAGTTTGGCAGTTCCTCAAATGGTTAAACATAGAATTACCATATTATCCCTGGTGAAGGGTGAGGCTTCCCTGGTGGCTCAGACAGCACAGTGTCTGCCTGCAATGTGGGAGACCTGGGTTCCATCCCTGAGTCAGAAAGATCCTCTGGAGAAGGAAATGGCAACCCACTCCAGTACCTTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTATGCTACAGTGGGGTTGCAAAAAGTTGGACATGTCTGAGTGACTTCACTTTCACTATATTATCCAGTAATTCCACTCTTAGCTATAGGAAAAAATGAAAATGCATCCACACAACTTGTAAACAGATGTTTATAGTGGCATTATTCATAACAGCCAGAAATAAAAACAAGTCAAATACCCATCAAATAAACAAAATGTGGCATATCCAGACAATGGAATATTATTCAGCAATTAAAAAGAAACTGGGTACTAATACATGCCACGACATGGATAAACTTCAAGTGAAAGAAGCCAGGCAGGAAAAGCCACATATTGTGTGATTTGATTTGTATGAAATGTCCAGAATTGTTAAATCCCTATATGGAGAAAGTAGGTTATTGGTTGCCTAGGACTGGGGGATGTTGGGGAGGAGTGGGAGTGACTGCTAATGAATTTGGGGTTTTGGGGAGGGAGATGAAAATGTTATAGAATTGATTTTGTGGTAATGGAGGTACTACTCTATGACTATACTAAAAACTACTGAACTGTGCACTTTGTGTGAATTGTATGGGGTGAGAATTATTTATCAAGTTGTACAAATTAAACTTTATTTTTCTCCTTGAAGGAAAAATGCTTATGTTGAGGGATATAAATTAAACCTTCTGTGAGACTGTGCTCATATTCTGGCATATGAAACTAATTCTGCTGTCAAAATAAGCAGGTATGATACTTGGGACATATGGCAGTTGAGAAAATATCTATGCTATTTGAAAAGGATCGAAGCTGATTAAGGCCTGGTCCCACTTGTCAAAAATAATTATGTAGAGATCAATAATCTATAAGTAAGTAAAGACATATCTGTTATGGCAGTTTTTTTTTTTTAATTACAACATTGATTTTAATATAATCAGTTAGGAGATAATGCTTGTGTTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAGCTTCAATACTTTGGCCACCTGATGTGAAGAGCTGACTCACTGGAAAAGACTGTGGTGCTGGGAAAGACAGGAAGAGAAGGAGACAACAGAGGAAGAGATGATTGGATGGCATCACCAACTCAATGAGTTTGAGCAAGCTCAGGCAGATGGTGAAGGACAGGGAAGCCTGGCATGCTGCAGTCCATGGGGTCACAGAGAGTCGGACACGACTGAGCAATGAACATCAACAACGGTTGTGTTGCATTGGTTCCACTTGCAGTCTGGAAGAGCACGCAGGTGACACGGGATCCAGGGAACTAGGGTGGGAGGGGGAACCCACTAAGATAACATAGCAACTGGTTTGGCTTTAAGTGATAAAGGGGTAGGATTGAAGAGGGGGATCTAGCGCTAGAAAAGGAAACGTCAGTAAGCTTGAGTAAAGGAAGACAGAAATGCT EMBV3_26545 GCAAGATGACAGGCAGTAGTTGTGGCAAACCGTCTATGAAACGGAGGTAGGTTTTCAATT Gene GeneID:513420|BTBD3:XM_002692033:28_cdna Constitutive 2 NULL GeneID:513420 13 GENE BTBD3 NULL BTB (POZ) domain containing 3 EMBV3_41495 TCTACACTTTGCCATTTAGCACTGTCCAGACCCCTGGCCCCCTGCCCATGACTGACAAAG Gene BVV0101_031602 + 0 NULL GK000006.2:109135291-109162592 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03908 TGATTGGCCTGGGCGTCTTTGGAGCCATATGTTTACAAGAAATACAAGTGTCATAAATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28838 CGGAACTAATAAGCCACCACCAACTGGAAGAGTTTGGGAAAGGTCGAAAGGAGACACTGC Gene BVV0102_413159 + 0 NULL GK000022.2:15499958-15511407 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091375 TCONS_00130065 TCONS_00117416 TCONS_00101666 TCONS_00030450 TCONS_00107044 TCONS_00147216 TCONS_00187480 TCONS_00072211 TCONS_00229992 TCONS_00147214 TCONS_00110480 TCONS_00188109 12 XLOC_056150 XLOC_078776 XLOC_071582 XLOC_061734 XLOC_016703 XLOC_062970 XLOC_089317 XLOC_113525 XLOC_043980 XLOC_139486 XLOC_066384 XLOC_114152 Coding TCONS_00130065 XLOC_078776 NonCoding NonCoding - 22:15502768-15503341 - TSS96932 573 2 TCONS_00130065_1 43 0.209424083769634 1 0 0 0 0 2.89848863108424e-05 0 0 0 0 0 0 7.99018349346635e-06 0.000127925966624956 1.0730312403409e-05 0 1.48651161165711e-06 4.60935534565618e-05 0 0.00188838629476602 0 0.000100404027119851 0 4.31685197559633e-06 1.60105479937649e-05 0.0012385746267917 0 0 0 0.000134103655899428 0.000779446641344898 5.37744427807844e-05 XR_231032.1 LOC101902570 PREDICTED: Bos taurus uncharacterized LOC101902570 (LOC101902570), 5e-173 610 90.07 0.788830715532286 0 noncoding 0 0 0 0 -1.7127358889164 0.00719002151320213 0.00594984544184408 0.916890944835687 ATATTTTCTTCCATTCTGTAGCTAACTTTTTCTCTTTACATGAGTTTTCACGGAACAAAAATTTTGACTCATTCCAATTTACCATTTTCTTTCTTTCAGTGTTGAGTGTAAGAACTCCTTGTGTTAGGGGAAGCACACTGACTGAAACCGCCCACCCTGGCCAGGCGCTTTAGTAACCATTCACATGAGTTATTTTATGACAGGAAATCCTGGTAAGAAATACGGAACTAATAAGCCACCACCAACTGGAAGAGTTTGGGAAAGGTCGAAAGGAGACACTGCATGTCCATCCACTTCCCAGAATCCCTCTCGCTAGCATCCGTCTTGGCTGGGCGATGCGTGCGCCACCAGGAAAGACTCTGAATTAGAATGATTGGCCAAAGACAAGCCGGAAACTAATCCCATCACTGTAAAACCTAAGACTGCAAGACACATGGCAGAGCAGTTCTCCTGGGTTCCCTTACCCTACTGCTCTCCACCCGGGTGCCCTTTCCCAATAAAATCTCTTGCTTTGTCAGCACATGTGTCTCCTCGGACAATTCATTTCTGAGTGTTAGATAAGAGCCCAGTTTC TCONS_00128038 . 5' 3643 TCONS_00128038 . 5' 3643 EMBV3_02935 AGGGCCTATTATCCTGTATGCCAGAGTGGGGACTTCTGCTGAGGCATCCAACACCATAAA Gene BVV0102_300104 + 1 EMBV3_02600 GK000004.2:49907596-49942906 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34799 GGAAAACTGCACCATTCCCAGCAATCTGGCTCCCTTTCTCGTTCCATTCAAGGTGCCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19824 GACCCTTTCTGCTCACAAATCTGCTCCAAGCAAACTGCTTTTGGCCTCGTTCACTGGGAA Variant GeneID:507942|MGC152281:NM_001101891:5_cdna 522^654 1 EMBV3_26236 GeneID:507942 11 GENE MGC152281 NULL hypothetical LOC507942 EMBV3_14783 CCAGAAGGTGAACCACTTCCTCTGTGACATTCGCTCTGTCCTCAAATTGGCCTGTGGTGA Gene GeneID:511400|LOC511400:XM_002687030:105_cdna Constitutive 0 NULL GeneID:511400 4 GENE LOC511400 NULL similar to olfactory receptor OR7-15 EMBV3_33030 CAGGAATTCAGTTTACCATGTGATAGGAGAGAAATACCAGTGGGTGGATGAGAAAGGCCC Gene GeneID:506367|FAM124B:NM_001101870:64_cdna UTR3_Alt 2 NULL GeneID:506367 2 GENE FAM124B MGC160014 Protein FAM124B EMBV3_02642 GGGACCTCCTTCCAGCCTCAGCCCCAGTTACCCTGTGAGAATGTTTTTACTGGTGTATAT Gene GeneID:512110|LOC512110:XM_002696179:163_cdna Constitutive 0 NULL GeneID:512110 19 GENE LOC512110 NULL similar to Uncharacterized protein KIAA0195 (Transmembrane protein 94) EMBV3_41422 CAAAGCACTGTATTGTAAACGAACCAGGCTGACCCAGGTTATACTCTTAATGTATACTCT Gene BVV0102_409915 - 1 EMBV3_24755 GK000008.2:17311600-17323315 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224552 TCONS_00224546 TCONS_00224548 TCONS_00224549 TCONS_00224550 1 XLOC_137551 Coding TCONS_00224546 XLOC_137551 Coding Coding PLAA 8:17271466-17313570 j TSS168348 4665 2 TCONS_00224546_5 355 14 0.889532812388666 0.00147137206559931 0.000847241727519633 0.000415928231513673 0.00075338796884913 0.00059885886564071 0.000277956571741634 8.79274032504931e-28 0.000413910408517818 0.00052655764832233 1.71776618324062e-19 1.29150916000882e-54 2.19233870792834e-05 2.24406392211588e-06 0.000151622609197173 0.000130034215717401 0.000407368802383767 1.38791351134088e-11 0.000145933813511797 0.000529625101316567 0.000540254875718791 0.0003632345086018 4.40642641951202e-05 8.64973772245153e-05 0.000115477281331141 0.00100918190196979 0.00059995893379792 0.000868206924737606 3.79808592519786e-05 4.41580834494697e-11 1.7234152721011e-11 NM_001105335.1 PLAA Bos taurus phospholipase A2-activating protein (PLAA), mRNA. 0.0 4744 99.66 0.566773847802787 NM_001031689.2 PLAA Homo sapiens phospholipase A2-activating protein (PLAA), mRNA. 0.0 4242 82.26 0.902465166130761 TCONS_00224546_5 sp|Q9Y263|PLAP_HUMAN PLAP_HUMAN Phospholipase A-2-activating protein; 0.0 683 93.24 0.997183098591549 1 noncoding 0 0 0 0 0.411707737694983 0.157140356445517 0.0414554060110041 0.516510019878448 CCTTCCCTGCCGCCCTTCCGCCGGCCCTTGGGTTCTTCCGGGCCCGGCGTCCCTCACTTGCAGGCGCTCTCCAGCCGCCCGCCGGGCCTCGCCGACTGACCGAGCTCGCGCGGTGCCCCGGCCCCGGGCGCCGGACCCACCAGGGCTATGGCGAGCGGCTCCTGCAGATACCGGCTGAGCTGCTCGCTCTCGGGCCACGAGCTGGACGTGAGGGGCCTGGTATGCTGCCTCTATCCACCGGGGGCTTTTGTGTCCGTGTCCCGAGATCGCACCACCCGCCTCTGGGTCCCAAACAGTCCTAACAGGGGCTTTACAGAAATGCACTGTATGAGTGGCCACTCCAATTTTGTCTCTTGTGTATGCATCATACCTTCAAGTGACGTGTACCCTCATGGACTAATCGCCACTGGAGGAAATGACCACAATATTTGCGTTTTTTCACTTGAGAGTCCAGCACCACTTTATGTACTAAAAGGTCACAAAAACACTGTTTGTAGTCTTTCATCTGGCAAGTTTGGGACATTACTTAGTGGCTCATGGGACACAACTGCTAAAGTCTGGCTGAATGACAAATGCATGATGACCTTACAGGGTCATACAGCTGCAGTTTGGGCAGTAAAGATACTACCTGAACAGGGCTTAATGCTAACTGGATCAGCAGACAAGACTATTAAACTGTGGAAAGCTGGAAGATGCGAGAGGACTTTTTCTGGGCATGAAGACTGTGTAAGAGGCTTGGCAATTTTGAGTGAAACAGAATTTCTCTCCTGTGCAAATGATGCTAGTATTAGAAGGTGGCAAATCACTGGCGAGTGTCTTGAAGTATTTTATGGTCATACAAATTATATTTATAGCATATCTGTCTTTCCAAATTGTAAAGATTTTGTGACAACAGCAGAAGACAGATCTCTGAGAATCTGGAAACATGGGGAATGTGCTCAAACAATCCGACTTCCAGCTCAGTCTATATGGTGCTGCTGTGTGCTGGACAATGGTGACATTGTGGTTGTGATGGTATTATTAGAGTGTTTACAGAATCAGAGGATCGGACAGCAAGTGCTGAGGAAATCAAGGCTTTTGAAAGAGAACTCTCTCAAGCAACCATTGATTCCAAAACTGGTGACTTAGGGGACATTAATGCTGAACAACTTCCTGGGAGGGAACATCTGAATGAACCTGGTACTAGAGAAGGACAGACTCGTCTAATCAGAGATGGAGAGAAAGTTGAAGCCTACCAGTGGAGTATTAATGAAAGGAGGTGGATAAAAATTGGTGATGTTGTTGGCTCCTCTGGTGCTAGTCAGCAAACATCTGGAAAAGTTTTATATGAAGGGAAAGAATTTGATTATGTTTTCTCAATTGATGTCAATGAAGGTGGACCATCATATAAATTACCATATAATATCACTGATGATCCCTGGTTAGCTGCATACAACTTCTTACAGAAGAATGATTTGAATCCTATGTTTTTGGATCAGGTGGCTAAATTTATCATTGATAACACAAAAGGTCAAATGTTGGGACTCGGAAACACCAGTTTTTCAGATCCTTTTACAGGTGGCGGTCGGTATGTTCCAGGCTCTTCATCAGGATCTTCTAACACCCTTCCTGCAGCGGATCCTTTTACAGGTGGTGGTCGGTATGTACCGGGCTCTGCAAGTATGGGAACTACCATGGCTGGAGTTGATCCATTTACAGGAAACAGTGCCTACCAATCAGCTGCATCTAAGACAGTGAATATTTATTTTCCTAAAAAAGAGGCTGTCACTTTTGACCAAGCAAACCCTACACAAATATTAGGTAAACTAAAGGAACTTAATGGAACTGCATCTGAAGAGAAGAAGTTAACTGAAGATGACTTGGTACTTCTTGAAAAGATACTGTCTCTAATATGTAATAATTCTTCAGAAAAACCCACAGCCCAGCAACTTCAGATTTTATGGAAAGCTGTTAACTGGCCTGAAGATATTGTCTTTCCTGCCCTTGACATTCTTCGGCTGTCAATTAAACATCCCAGTGTGAATGAGAACTTCTGCAACGAAAAAGAAGGGACTCGGTTCAGCAGCCATCTCGTCAGTCTTCTGAACCCCAGAGGAAAGCCAGCAAACCAGCTGCTTGCTCTGAGGACTTTTTGCAATTGTTTTGTTGGCCAGGCAGGACAAAAGCTCATGATGTCCCAGAGGGAATCACTGTTGTCCCACGCAATAGAACTGAAATCAGGGAGCAATAAGAACATTCACATTGCTCTGGCTACGTTGACCCTGAACTATTCTGTGTGTTTTCATAAAGACCATAACATTGAAGGGAAAGCTCAGTGCTTGTCAGTAATTAGCACAGTCTTAGAAGTTGTACAAGACCTCGAAGCCACTTTTAGACTTCTTGTGGCTCTTGGGACACTTGTCAGTGATGATTCCAATGCTGTACAATTAGCCAAGTCTTTAGGTGTTGATTCTCAAATAAAAAAGTATGCCTCAGTATCAGAGCCAGCTAAAGTAAGTGAATGCTGTAGACTTATCCTAAATTTACTGTAACAGTGGGTTAGGGGACTGAGATTTTAAATTGATGAGTGTTTTTTTCTTTCACATTTCACATGACTGATAACAGATGATGAAACAAATGCTGTGGATTAAGTAAAATTTCAGATCCTGTAAAGTGGGGTAGTGGGGAGAGGGGAAATAAAATTTTTGCACTGATGAACTGTGAAATTTTCCTGTGTAATGCGGGCAGGTTTTTAAGAGCTTTAGAGATAAATTAAGAATGAGCTATGACCACCAACAACACAACTACAGTGGCAGAATTCCTTTACATTAGCCACCTAGAAGAAAAGGGCTTTTATTTATGTAATCTGCTTTTGCTATTATACTTGTATACACCAGATTGTTATTTCTTGGTGGTTGTCTTTTATTTAATTTCCACTCTACTCATTTTCATTGCTTGATTCAATAGCACTGAATGATTTCAAAGTCTTGTTTTAGGACAAATGCTTTAGAATTAAAATTAAGTTTGTTACAAATTATTCCATATATTGAGATGTAAAATAATTTCTTCATTTAAGTCCTTTGTAAATAGAAAGTTTGTTTAATGGCTTATTTTTAGATGATTGAGAGCAAGTTACTAATTTGTTAGGTATTTGAAAGCAAATTTGTTAGGTATCAATTCAGTCATATGAAGCCCCAAATTGACTACAAGTTCATGATCCAGTTTCTTTTCCCCTTCACTATTTGGGATAACTTCATTATTCCAGTTTCAAAAATAATCTGATTGTTTATTTTTGGTTATTTCTATATATCAGAGGGAGTTTGGAATGTGTTGAATATTATCAGACAGTTGTGCAAGCAAGAGTACATCAAACTGTTATTTGCAAGTCCAGAGACTGTCATTGGAAATTAGTATTTTTGAGCCCCTAAACATGGTCCCAGTACTGTGTTGGTACCAGTACTTCGATATTTAATCCCCAAATCTCCTTAAGTGTAGGATGATGTTATCTCTGTTTTCAGAAGTAAAGATGGTAGGATGAATCATGATTGGAAAAAGGGAAAAGTACATACCGTTCTATACTTCCTAGAGAATGAGTGGGGGAGAGGAGCATATCACAAGTTTGTCTGTGAACATCCTTGCAACTAACAGGAAGCAGGAACCAATCCGTTAATTACTAATTTATTGTTTAAGAGGACTTCAATTTCTTGAGAGAAGTTTGACTATTCCTAATCTAAAATAATGAGCTTTATTGTCAACATTTATGGTATATAGAACCATGAATTTCCTGGCTTAATGCCACATTGTAGTCTAAGAAGAACAATTTTTCCTCAAATAAGGAAGGAAACCATTTTGATTATCTAGATTAATCAAGGAAAAACTTCTGGACTATCAGAATGGGTAAAATGTAAATTGAAGGGACATATATTTTGCTAAGTATTAAATTGCCATTTTCTGGTGTGTACCCAGAGTTTAAATATTGTTTGCTGGTTCCGTTAGTAACCCATGCTTTGCTTTTTGCTTAATTGGGATTTAAGGGGTTAAGTCCAGGTTAAATGACATTAAGAGTATACATTAAGAGTATAACCTGGGTCAGCCTGGTTCGTTTACAATACAGTGCTTTGTTTTTAACATATCTTGTTTAACATGCAATTTTAAGTACAGTTTATCTGCAATATTTTGAAATACTAGGCACCTTTGTATAATTGTAGGATGTAGAGTTTTGGTTAAGAATAGATTACTAAATTACTTTTTCCCATGATTCCCTTATTTTTTTCTAAACAGAAAAATACACATTCACACATCAAATAATAATTGCCTATAATTCCACTACCTGGAGAAAAACCATTCTTATTTAACATCTTGTGCCATATCAGTTGGTATGTAAACATGTTTTATTTTTTTAAAAAGGATTGTATGATACACATTGTTCAATAACCTGATTTTTTAACTTGACATTTAGTACACATATTTCCATCTTAATAAATATTATTTTATATCCATGTGCCCATTTCCTATTATCTAACATTGTTTCCAATTTCCAACTATTAAGCAATGCTATGACAATACAAAGTTCCTGCAAATTCCTTAGGATACATTGTATACTTGGATACAGTGGTGGGTGGGTCAAGACAGTGCACATTTTTTAAACTTTGATAAATGTTGTCAAATCACTTCCAGTGATAAAAG EMBV3_23508 AACCGAACAGCCCTAATCTTGCCCCTTGTTACAGATCAGAGATGCCCAGCTAACTACTTC Gene GeneID:525563|ENOPH1:NM_001075875:13_cdna Constitutive 0 NULL GeneID:525563 6 GENE ENOPH1 MGC139556 enolase-phosphatase 1 EMBV3_01254 GACTCTTGATGGACTGAATTCTTGCAAAAGGCCCTAAAGATGCTTCGCAAGCCCCTGACC Gene BVV0102_059269 + 1 EMBV3_20115 GK000001.2:136071077-136182275 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43365 TGAAAGCTTCACCATTGCTAGCTGATGACAGCAAGTTGCGTGGTTTACCCCTGACCTATG Gene GeneID:519557|AADAC:NM_001075791:35_cdna Constitutive 0 NULL GeneID:519557 1 GENE AADAC MGC142384 arylacetamide deacetylase (esterase) EMBV3_17913 GAAGGGCGTGACGTTACAAAACGCTGAACCACATACTGAACCAGTGAAGCACACTGAACC Gene GeneID:619100|TP53RK:NM_001099180:1360_cdna Constitutive 0 NULL GeneID:619100 13 GENE TP53RK MGC159543 TP53 regulating kinase EMBV3_33556 CAATTGGTTCAGGGCAACTGGGAAAAAACAAGTGTATCTCAGACCTCGCCTTTGGATACC Gene GeneID:539797|RTKN2:XM_002698844:41_cdna Constitutive 0 NULL GeneID:539797 28 GENE RTKN2 NULL rhotekin 2 EMBV3_13277 AGTTCAGATATGGGTGAGGTCAAAACAGCCCAAGAGCAGCAAGGAAGCAGGAGACCTGGT Gene BVT0102_060013 - 1 EMBV3_29815 GK000018.2:64182958-64202392 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087666 TCONS_00087665 TCONS_00087667 1 XLOC_052565 Coding TCONS_00087667 XLOC_052565 Coding Coding - 18:64184723-64190285 - TSS65073 920 1 TCONS_00087667_1 180 0.159782608695652 4 0.83528142420428 0.00330273033579572 0.0026770641341397 0.00226466745184419 0.00341160927936248 0.00576898935268948 0.00108728956802971 0.00110294458351611 0.00283841980410021 0.00246136740266862 0.000559029426946948 1.43804522569201e-05 1.12249444543529e-14 0.000902789217282909 1.93105056163525e-15 0.0016981230527621 0 0 0 0.00358430891658976 0.00374808503251753 0.000292760385877917 0 4.55039321089194e-13 0 0.00707257387190872 0.00650246523187094 0.00405136116865219 5.70652348511102e-13 5.80437610352484e-05 8.92341514414825e-14 NM_001002888.1 ZIM2 Bos taurus zinc finger, imprinted 2 (ZIM2), mRNA. 0.0 1094 99.19 0.671739130434783 NM_003447.3 ZNF165 Homo sapiens zinc finger protein 165 (ZNF165), mRNA. 8e-27 125 82.26 0.133695652173913 TCONS_00087667_1 sp|Q9UL58|ZN215_HUMAN ZN215_HUMAN Zinc finger protein 215; 5e-28 110 49.54 0.6 1 coding 1 1 1 1 -0.127983558078383 0.290284633818651 0.00342949782274533 0.955578656649214 CTCCCAGCGCTCTCTGTGCAGCGCGGTCCTCGTGGGCCCCCCGGCGGAGCTGGCCGGAAGCTGCCTGCGTTTTCCGAGCGGCGCTGCGGCCGTCCCGCCGTGCACACGCGCAGACCGCGCTGCGCATGCGTCGCGGGTTTGCGCGGCAAGTCTGAGGTGGCGAGGTTCGGTCAGGCGAGGGTGTCCGTGTGCGAGCCCACCATCTTCCACAACAGTGTGCTTTGAAGCAGCCTGCCTTTTAGAGTATCTCCATCCTTTGAAGGGTCAAGCTGTAAAAATGCTCCACATGAAAGAGGTTTTGGATGACATCTTGAGGAATCCCCAGCTCATTCATCTACATGATCAAGAAGAAAATCCAGAAACCACCCCCATAAGAAACCCAGAGGTTCTGAGAGTTTCTCATCAGAACTTTAGGTATTTTCAATCCCTGTCGGTGACAGGGCCTCACCAAGCTGTGAGCCAAATCCAGGAGCTCTGCTGGCGGTGGCTGCAGCCAGAGATCCACACCAAGGAGCAGATTATGGAGCAGCTGGTGCTGGAGCAGTTTCTGAACATCTTGCCAGAGAAAGTTCAGATATGGGTGAGGTCAAAACAGCCCAAGAGCAGCAAGGAAGCAGGAGACCTGGTGGCAGACTTGATCCAAGTATGTGAGGAGGAAGGTTTCTCTCTTCAGAACTTTGTTCTTGCCGAAAAGAGAAACACCAATGAACACCAAAAGGAGGACACAGAGATGTCTGACAGTAAACCATTTGTTACATCTCAGTGTTCATGTCAAGGATCCCAAGTGAAGATGCCCACAGAGACTGCTGAGGTAATATAAAAGAGCTTGTAAGTGGGTGGATTATGACAAACTGGGAGGCACCTGCCCCATCAAAGGGGCAGCTGTGACTCAGCTTCAGCTAATGGTGCCATGTGAGAAT TCONS_00084891 TCONS_00084892 r 3' 1049 TCONS_00084891 TCONS_00084892 r 3' 1205 EMBV3_09259 TCTTTACCATCTCGGTCAACGGCGTTCTCTATCTGCAGGCCGGGCAGTACACCTCCGTCT Gene GeneID:100138523|LOC100138523:XM_002686584:52_cdna Constitutive 0 NULL GeneID:100138523 3 GENE LOC100138523 NULL similar to family with sequence similarity 132, member A EMBV3_09529 ATAAATTTCGGGGGACCTTGGAAGGGCTTGGCACCCGTCTACTCTCGTTGCTATGACCGT Gene BVT0101_063952 + 0 NULL GK000007.2:41731783-41751289 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220555 1 XLOC_133872 NonCoding TCONS_00220555 XLOC_133872 NonCoding NonCoding - 7:41749866-41750809 - TSS164553 943 2 TCONS_00220555_5 100 0.0901378579003181 1 0 7.21404581520245e-05 0.000181148914197212 0.000431787342503639 4.40305374411669e-05 0 0 3.0921020312908e-05 0 0 6.10847660581962e-05 3.88408940778016e-05 2.2750917494505e-05 3.0427194350785e-05 0.000219486474037871 0.000161285168052942 0.000700204245360168 0 0.00188913529471114 0.000494284627046248 0.000457566363941689 0.000331579924529786 0 0.000175114338494121 8.88898773736393e-05 1.46945482211015e-05 7.47134129657245e-05 0.000347946060181633 6.11145513699922e-05 0.000118404868797586 5.73808787999592e-05 XM_005209234.1 TRIM41 PREDICTED: Bos taurus tripartite motif containing 41 (TRIM41), 4e-120 435 100.00 0.254506892895016 NM_033549.4 TRIM41 Homo sapiens tripartite motif containing 41 (TRIM41), transcript 1e-38 165 74.50 0.265111346765642 0 noncoding 0 0 0 0 0.0658793447570722 0.619862278141358 0.0480913240921998 0.393944614922078 GGGGGTGGGAAACAAAATTATTATTTTTTTCTTTAAGGCAATAAATTGACTTGGTTCAAGTTCAAAAGATACAGAACAACATTTACAGAAAAGTGTCCTAGATAAACTAGTATTCATCCAGAGATAGACAACAACGATGATAATGATGGACAGCTAAACCTTGTATCTCACTTACTATGTGCTAGGCAATATTATAATAGTTCTGCACGACAGTAATTTCACTAAACCCTCTCAGAACTACCTTTATGAATTAGTACAGGACTATAAAGCTATTACATACATTTAACATCCTATCCCCCTCCCTTCTTTACAATTATACTCTACACATTGTTTAGCACCTTGTTTTTTTCATTTCATTTGTACATTTTGGGGAGGATTCCCTTTTCTACATCTGGTGTTCCACTGTGTGAATGTGCATGTCATGATTTGCTACGGTTCCTTTACTGATGGCAGTTAAGAAAGTTCATCCAAACGAAGCGACAGTGACCGATGGTAGTTTCTACAGTGTTTGGAAATGCCAACTACAGCGGGGAGTATGGGAAGGGTCTCCGGTCCCATCTCCACCGTACTTCTACAGACCCCGCCCCCTAGTCAGTCTCGGACCGACTCTCGGAGTCTTCAAACAACAAAGTCCTTCGCCTAGATGGGCCGGAAGTACTTCAGGGTTCTCACCGACACCCGCCCTTCCCATTTCCGGCATCGGCCTTGGGGAGTTCCTGCTGCAGTTCTCCGTGTCCGGTCGGTAGGATGGCGCCGGGCCGATACGGTCATAGCAACGAGAGTAGACGGGTGCCAAGCCCTTCCAAGGTCCCCCGAAATTTATCCCCAGTGGCGGGCGATGGGGGAGGCCGGGCTTTCAGTTTCGTCTGCGTTCCCCACTCCCTCGCATTACAGAGTCGTACGCCTCCGTCCTTCTAGGCCTCCCTCCCTGTTCCTGAGTGCC TCONS_00212993 . 5' 154 TCONS_00212993 . 5' 154 EMBV3_40343 TGGTGTTTGGCCAGTGATGCTGTGAGTTTGGGAAGATCTTTGCTGAAGACTCTTTTCCCC Gene GeneID:533044|PSAT1:NM_001102150:35_cdna Constitutive 0 NULL GeneID:533044 8 GENE PSAT1 MGC166278 phosphoserine aminotransferase 1 EMBV3_00325 CTATATTCTGCGGCCTGTTTTCCAGCAAAGAAATGGGATTTGACCGATATAAAATGGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36543 CATATGCAAACAATCTGGTGCTAATGTTTCTCCCATGGCATTCCCGGGTGGTGGCTGATG Gene BVT0102_083165 + 0 NULL GK000030.2:143538188-143557039 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248643 TCONS_00248640 TCONS_00248642 TCONS_00248641 1 XLOC_151653 Coding TCONS_00248640 XLOC_151653 Coding Coding LOC100847680 X:143554460-143843053 j TSS185903 4394 1 TCONS_00248640_3 441 0.0430131998179335 7 0.984798608416034 0.00106996612849358 0.00237632435710225 0.00223165346590996 4.46659703152816e-05 2.58884077232344e-05 0.000935783716785867 3.22860159667792e-05 0.00059894464986967 2.44364437814664e-08 1.07300103274859e-05 1.1669903395485e-05 2.17643742081814e-05 1.69864829595369e-05 0.000100973259114614 2.49939140010346e-05 3.75610867202313e-07 6.94019535597315e-05 0.000117136435366896 0.00227210698077811 0.00300983229947201 1.99093466158944e-05 3.54711593914764e-05 4.47591606353861e-05 0.00169296441032187 0.00326010078082151 7.9983996105795e-05 0.000659891267901831 3.44125461155849e-05 6.57146428188642e-06 2.10365460576422e-05 XM_005200562.1 LOC101905937 PREDICTED: Bos taurus protein Shroom2-like (LOC101905937), mRNA. 0.0 5618 100.00 0.708693673190715 NM_001649.2 SHROOM2 Homo sapiens shroom family member 2 (SHROOM2), mRNA. 0.0 1418 82.67 0.306781975421029 TCONS_00248640_3 sp|Q13796|SHRM2_HUMAN SHRM2_HUMAN Protein Shroom2; 0.0 734 83.59 0.997732426303855 1 coding 0 0 1 1 0.0371702692971141 0.747316951775185 0.0118818786706602 0.800466109086396 GAATATGGATGGAGAAAGGAAATGGTTGCTGTAGAATACTGAACAGTTCCCTGGGCCGTACAACAAGCAGATGGTCAGCGTTCGGAGGACCACCCAGGAGCACTGCGGGACCCCCGGCAAACCTCTGAACCCCCTGGCAGCAGGGAAGGGCCCGAGGTGTCCCTGGAGGCCCGCGGCCGGGCGGGCACTCTCCCTCGCGATTACCGGTACCTGGAGCCGCGCACGCCCCTGGAGCCACCCGCCCAGGGGCAGGAGCCCCGGCCCCTGAGCGCCGCCGCGACAGCCCGGAGACCCGCCCTACAGAGGCCACAGCCGCCCAAGCGCGAGCTCTGGCCGCCGCCAGGGGACACGCCCAGCCGGCCTCACACCTCCGTGGCCTCCTCGGAGGCGGTGGACACGCGGAGCACGCGGCGCGTGGAGGAGCCCACGGCCCGGCCCTGGCGGGAGGCGCTGCTTCCCGCCCCGTTCCGGCCCCTGCAGACCTCCGCCATGGACAGCTCGCGCTCGCCGTCGCCGCAGTTCGCGCCGCAGAAGCTGACGGACAAGCCCCCTCTGCTCATCCAGGACGAGAATGCTGCCAGAATCGAGCGGGTGATGGACAACAACACCACGGTGAAGATGGTGCCCATCAAGATAGTGCATTCGGAGAGCCAGCCGGAGAAGGAGAGCCGCCAGGCACTGGCCCGCGTCCCCGAGCCACCTCCGCTGCCCCGGGGCCTCGAGCGGGACCAGATCAAGACGCTCAGCACGTCTGAGCAGTCCTACTCACGCTTCTGCCCCTACAGCCGCCAGGGTGCCGAGCCCCAGCCCGCCACCGGCGCCCTGGGGCCCCCCGCCAAGGAAGGCCGGGCCTCCCCTCCTGTGCTCAGCTACGTGAAGGCCAAAGACAGGACCGCCGACGACCTCAAGTCAGAGGAGCTGGCCCGCGAGATCGCGGGCAGGGATAAGTCGCTGGCGGACATCCTAGACCCGGGCGTGAGGATGAGAACCACCATGGACCTCATGGAGGGCATCTTCCCCAAAGACGAGCACCTCCTGGAAGGCGCACAGCAACGGAGGAAGCTGCTGCCCAAGGGGCCCTCGCCCAGGACGGCGGAGGAGAGGAGGGAGGAGACCAGTGTGCTGGCAGCCGCACCCTTGGCCACCAACTCCGCCTACTACAGCACGTCAGCTCCCAAGGCGGAGCTGCTGATAAAGATGAAGGACCTGCAGGAGCAGCAGGAGCCAGAGGAGGACTCAGGCAGTGACTTGGACCACGACCTGTCAGTCAAAAAGCAGGAGCTCATTGAGAGCCTTGGCCGCAAGCTGCAGGTGCTGCGGGAGGCGCGGGAGAGCCTGCTGGAGGACGTGCAGGCCAACAGCGCGCTGGGCGACGAGGTGGAGGCCCTGGTCAAGGCCGTGTGCAAGCCCAATGAGTTTGACAAGTTCCGCATGTTCATCGGGGACCTCGACAAGGTGGTGAACCTCCTGCTGTCGCTGTCCGGCCGCCTGGCCCGCGTGGAGAACGCCCTCAACAACCTGGACGACAGCACGCCTCCGGGCGATCGGCAATCCCTGCTCGAGAAGCAGCGCGTCCTGATCCAGCAGCACGAAGACGCCAGGGAGCTGAAGGAGAACCTGGACCGCCGGGAAGGCATCGTCTTCGACATCCTGGTCAGCTACCTGGGCCCCGAGAGCCTGGCGGACTACGAGCACTTCGTCAAGATGAAGTCGGCGCTCATCATCGAACAGCGCGAGCTGGAAGACAAAATACACCTGGGTGAGGAGCAGCTGAAGTGCCTCTTGGACAGCCTGCAGCCCGAGAGAGGCAAATGAGGGTGCACCCACCCCCCACCCCACCCGGCCCTCCCTGGAGGAGGAGGAGGATGCAGATGGGATTGGCGGAGTCATCAGCTCTGGTCCTGCGGATGCAGCTGAAAACCGCAGCCTGTATTTATGTCCTGTTGATGGGGGTCGGGGGGTGGGGGGGTGTCCTCTCACGGCCAGGTGGCGGTCAGCAAAGCAATAACTTCCATGTGTGTGTTTGGGATGAGTTCTTTAATTCTTCGGTTCCCTTTTGGAATGCTGAGCAGAGCGGCTCCCCCCACCCCTTCTCCGTGGTGGCCTGGAAGCGTCCCCACGTGGCGCGGGGGCTCGGGTGCGCCGTGCGCGCCTGCGCAACAGGGTCACCACGTGGCCTATGCCGGCAGTGCGTGCGGGCACTGAACCGCGTCCTCCGCGCAGGAAGAAATGAGTGTGTCTCTAAGAAGGTGCATGTGGGTTGAGGGTGGGGGGAGGTTCGCCTGGTGCACGAGCTGTCCTGTGGATCACGGGAGGCGCCGGAAGTGTTGCGCCTTTGGTTGTCTGTCCTGTAAGGATGACCCCTGACCCAGCAAAATAATGAGGATGAGCATTATTTATTAATGTGTTAGAAAGGAGAATAGTTGTCCATGCGGTTTAAAGACCAGCTGTGAAATGAGCTTTCAGCACGCTAGGTTCACTCATGGTGAAATCGCCACTTGCACAGTGTGCATGCTTTAAGGAAGGCGCACGCAGAAGGGACATACCGGCTTTTGTTCTTCTGGGATGGCACCCGTGTGCAAATGGTATTTCTCCTGCAAAGTGAGATTACCTGGCTGAAAGTGTCCGGAGGGTATGTGCTTGCAACGTTTTTGTTTTTTTTTTTCCCCTTAAGGCCCCTGAGATATTTTCCTCATTTACTTTCCCCTCCGCACCCCCCCCCACAGAACATTTCTTTGTGTCCTGATTGTATTTCTGTGTCTATATGATTGTGGATTATAATTGGCAGCTCCTCTCTTGTTTCTTCTCTGGATTAGTTATGGCAGTGTCAAGGCCACATTTCCTCTAAGAACCCATGGTTCTGGCTTTCCAGAGGTCCCAGTGGGCCACACAACTCCCAGACCTGGTCTTTATCTGCCACAGAGTTGACCACTGTCTGTTCCCTGTTTTATCATTTGATATTGCAAGGTGGTCAAGAGAGTCTGTTCACTAAAGAAAACACTGGCGAGCTGTTGTTTTCCAGTGCCCGAGTCATGACTAGGAGAAGATAACTTGCAGATCCCGTGTGCTGCATTTGCATCCAGAATGTATAAAGATCTTTCCAAGTTAACAGTATGAAAACAGACAGCCCAGTTAAAACATGAGCCAGAGACTTAAATAGACACTTCACCAAAGAGGCTATATGCATGTCAGTAGGCCGCATAGGTGTTCAGCCTCTTGTGGCTTGGTTCTCACGGTCTGATTTTTAACCTGGTCATCTGTGTTCCGTGCCAGTTGGGTGAGATCCTGCATAATGGCGGGAGAAGCCCCAAGATAACTTCATGTTGGGGTGATAGTCAGAGATCAGATCACGTTACTCCTTGTTTCCTCTTATGCCTGTGAAAGGAGTTTTTCGACAGGTAGAAAGATAGCCCTTTGTCACCAGTGGCCGGCACCTTACCAAAGACAGAAGGACATAATGTCTTATTAAAGGACACTACTCCACACCCACGGAGCCAGAAGGACAAGCTGGACCGGCCGTGGTGATATCTCTGCAGCCCTGGGGGGAACCGACCTAGCAGGCTTCAGTGATGCTGGCAGTAAACATTCCTTGGCAGCCCACCCACGCCAAAGAAAAAGGCCTTTTTCTGCACTTTTTATTCTTCTTAAATTAAGCTGTTCCTGATTTGAAAAGACCCTCTTCTGCCAGTGAAGCATCGTCGTCCTCCTCATACGCTATGGTCACTTGCTGTGAAAATGGGTCATGGCAGAAAAGATAAAGCTGGCTGTCCATGGACCGCCCCCCTCCACCACCTTCCTCCCTTGGGGAGATAACCACAGTGATGTCAGTGTGTTTTGGTTTTCACAAAGCTTTCATCTGTGATTCTTGCCCTTGTCATACAGTATTGTGATCATTTTGATGATACATCTGTAAAATGTGAAAATAGAGTTTTTGCCTGTATCCAGCCTTTCAGTGTCTTTTGAGAACGTTGTCTTCTACATAGCAATACACAGGGCACTGGTGTCCTTTAAACGAAGCCCATAGAATCACAATGGTCCTGTCTATTTCCCCATCTGCCTCATAAATGTCTGGTGGTGGGGACATAGAGATTAGTGAGTCAGTGTGCACAACTTTGTGTATAGCTATATTACAGCATATGCAAACAATCTGGTGCTAATGTTTCTCCCATGGCATTCCTGGGTGGTGGCTGATGGCTCACCCCGGGTCATTGCTCAGCTGAGAAGTGCTCTCTGTATCTCGAGGTTGCAGTCAGGGGCCTTGCCGGAGACTTTGATCATGCCGCCCACCATGGAAGATGTGTACCAATTTCATGCTCAACACTTAACACTTACCTCTCAACAGATCATCCTGCTTGACCTTAATACAATAAATGGTGTCTTTCAGTGAATGGAGC EMBV3_23044 CCTAAAGACTTCCAGCAGCTGTTGGGAGAGGAGGCCGCTTTGGCCCCTGAATTTCTGGCT Variant GeneID:539407|OGFOD2:XM_002694478:320_cdna 222^335 1 EMBV3_25383 GeneID:539407 17 GENE OGFOD2 NULL 2-oxoglutarate and iron-dependent oxygenase domain containing 2 EMBV3_12149 TTCTTGCTGTCCTTCTGGGCCGTGGTCACAGCTTGTCGTCCTTCTTCTGGACCTTGGTCA Gene GeneID:100298355|LOC100298355:XM_002688289:7_cdna Constitutive 0 NULL GeneID:100298355 6 GENE LOC100298355 NULL hypothetical protein LOC100298355 EMBV3_19799 GCACCCAGCTATACACCCAGTGCCCCAATGGACACCAACCTCTTGAGCAACATTCAGAAA Gene GeneID:525567|FFR:NM_001102093:45_cdna Constitutive 0 NULL GeneID:525567 29 GENE FFR MGC152285 Protein fat-free homolog EMBV3_31394 CAAGAAGCTGATGTCCTTGGCTTACACGTTGCTCGCACCTCTGCTGAATCCACTGATCTA Gene GeneID:613938|LOC613938:XM_002693068:384_cdna Constitutive 0 NULL GeneID:613938 15 GENE LOC613938 NULL similar to cOR10A3 olfactory receptor family 10 subfamily A-like EMBV3_10278 GAGCTGGTCCCAGCCAGTCGAGTGGCCTTGGCCGCTGCTGCCAGGGGCCCTGGTCGACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01541 CACTGTGGCTGGTAAGAAGTCCAGTATTCCCCAGGCACGTCTCTTTGAGGGTAACTTGTC Gene BVV0102_132571 + 0 NULL GK000019.2:51328961-51384921 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37577 GCTGCTTCTGTACTGTGTCATATTGAGCCTGATGATGCTGATGATTTTGTTCGAGGTCTC Gene GeneID:613895|C12H13orf27:NM_001076295:35_cdna Constitutive 2 NULL GeneID:613895 12 GENE C12H13orf27 C13orf27 MGC128345 chromosome 13 open reading frame 27 ortholog EMBV3_11413 CACACTATTTTTAATACTTCTGAAGTGACCTAAGTCTTAATTTCAGTTGAGTGCCTGAGG Gene GeneID:530941|EPB41L5:NM_001035384:20_cdna Constitutive 2 NULL GeneID:530941 2 GENE EPB41L5 MGC128986 erythrocyte membrane protein band 4.1 like 5 EMBV3_02496 CCAGGATGCTTTAGATAGCGTTCCAGGCAAACCAGGCAGAAATGGCAGGTGATGTAACAC Gene BVV0102_356939 + 1 EMBV3_31549 GK000030.2:91228024-91232234 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30069 TGTCACCGGAGGGGGAAGGTCTGCAGCCGGCTATCTCTGTTCAGTCTTTTGTTCCGTGCG Gene BVT0102_442691 - 1 EMBV3_38545 GK000018.2:45339637-45513289 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210234 TCONS_00249639 TCONS_00218178 TCONS_00115686 TCONS_00252353 TCONS_00206812 TCONS_00066283 TCONS_00197928 TCONS_00116100 TCONS_00242131 TCONS_00250720 TCONS_00010366 TCONS_00071860 TCONS_00037672 TCONS_00038381 TCONS_00220662 TCONS_00200932 TCONS_00129573 TCONS_00242885 TCONS_00209846 TCONS_00065476 TCONS_00209711 TCONS_00252107 TCONS_00218945 TCONS_00148280 TCONS_00008224 TCONS_00056146 TCONS_00021569 TCONS_00249011 TCONS_00224475 TCONS_00137878 TCONS_00107179 TCONS_00031939 TCONS_00089345 TCONS_00239419 TCONS_00039951 TCONS_00157439 TCONS_00189806 TCONS_00238306 TCONS_00063181 TCONS_00041057 TCONS_00224484 TCONS_00111497 TCONS_00109027 TCONS_00020017 TCONS_00209636 TCONS_00007431 TCONS_00251707 TCONS_00130084 TCONS_00037818 TCONS_00039226 TCONS_00178325 TCONS_00233372 TCONS_00010054 TCONS_00153218 TCONS_00123168 TCONS_00029865 TCONS_00240534 TCONS_00065823 TCONS_00209032 TCONS_00039904 TCONS_00085967 TCONS_00109025 TCONS_00130290 TCONS_00063486 TCONS_00207755 TCONS_00199802 TCONS_00250246 TCONS_00020756 TCONS_00209558 TCONS_00238327 TCONS_00224483 TCONS_00021595 TCONS_00088088 TCONS_00157613 TCONS_00117619 TCONS_00155778 TCONS_00059708 TCONS_00161835 TCONS_00115148 TCONS_00170823 TCONS_00142649 TCONS_00122313 TCONS_00249087 TCONS_00223554 TCONS_00020023 TCONS_00107832 TCONS_00199037 TCONS_00122479 TCONS_00019199 TCONS_00122686 TCONS_00166449 TCONS_00031910 TCONS_00152645 92 XLOC_128744 XLOC_152582 XLOC_131641 XLOC_069855 XLOC_155294 XLOC_125332 XLOC_040997 XLOC_119588 XLOC_070269 XLOC_148795 XLOC_153663 XLOC_005917 XLOC_043630 XLOC_021501 XLOC_022206 XLOC_133979 XLOC_122582 XLOC_078286 XLOC_149548 XLOC_128357 XLOC_040195 XLOC_128222 XLOC_155048 XLOC_132264 XLOC_090162 XLOC_003782 XLOC_033949 XLOC_012242 XLOC_151954 XLOC_137538 XLOC_084087 XLOC_063090 XLOC_018184 XLOC_054130 XLOC_146085 XLOC_023768 XLOC_095894 XLOC_115843 XLOC_144973 XLOC_037908 XLOC_024868 XLOC_067397 XLOC_064932 XLOC_010695 XLOC_128147 XLOC_002992 XLOC_154648 XLOC_078795 XLOC_021647 XLOC_023044 XLOC_108098 XLOC_142854 XLOC_005606 XLOC_092983 XLOC_074722 XLOC_016120 XLOC_147198 XLOC_040542 XLOC_127543 XLOC_023721 XLOC_052005 XLOC_064930 XLOC_079001 XLOC_038213 XLOC_126270 XLOC_121454 XLOC_153189 XLOC_011431 XLOC_128069 XLOC_144994 XLOC_012268 XLOC_052875 XLOC_096068 XLOC_071785 XLOC_094822 XLOC_036490 XLOC_098720 XLOC_069449 XLOC_103665 XLOC_087074 XLOC_073868 XLOC_152030 XLOC_136854 XLOC_010701 XLOC_063742 XLOC_120690 XLOC_074034 XLOC_009879 XLOC_074241 XLOC_101287 XLOC_018155 XLOC_092410 Coding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_24201 AGGTTCTTTATCACTGAGCCACCAGGGCTTCCCTCCTCACCAATAGGACCCAGGAAATCA Gene BVT0102_119629 + 0 NULL GK000007.2:12720907-12725716 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03151 GGAGCACAAGGCCGCACTCCCTGCTTCCTCCTCTGGGAGGACGGACGGAGGACTCAGGCT Gene BVV0102_452944 + 0 NULL GK000026.2:50889485-51008297 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07975 TTGGTTTGGAGGGAAAGGTCAGGCGTGCGGACCAGCCAAGCACTTCTCTTAGTGTCCTAT Gene BVT0102_276146 + 0 NULL GK000025.2:29349034-29391799 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00973 TATGAAATAATTTGATGAAATGTGTAGAAATGTTTCATGGCCATGGCTTGGGGAAGGCTA Gene GeneID:522828|GPC5:NM_001102070:32_cdna Constitutive 2 NULL GeneID:522828 12 GENE GPC5 MGC166256 glypican 5 EMBV3_01550 TAGTTCCCCGATGAGGGATCAAACCTACACCCCCTTGCTTTGGAATCGCAGAGTCTTAAC Gene BVV0102_357293 + 1 EMBV3_33169 GK000005.2:104039525-104058658 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03986 ACTTCAGTGAGATCCATTCCTTCAATGTGCTGGAGGGCTGGTGGGTCCTCTACGAGATGA Gene GeneID:616092|LOC616092:XM_002685549:155_cdna Constitutive 0 NULL GeneID:616092 2 GENE LOC616092 NULL similar to crystallin, gamma F EMBV3_17516 GAAAAAAAAGCAGAAACAATGTATTGCTGATAATCAGTTTGGACCAGTTTCTAAAGGTCA Gene GeneID:407127|BMPR2:XM_002685492:236_cdna Constitutive 2 NULL GeneID:407127 2 GENE BMPR2 bmprii bone morphogenetic protein receptor, type II (serine/threonine kinase) EMBV3_05004 TGGTCCTGGCAGTGTCCAGAAGTACATTGTGGTGTCTCTGCCGCCCACGGGGGAGGGCAA Gene GeneID:505638|TAF6:NM_001015525:92_cdna Constitutive 0 NULL GeneID:505638 25 GENE TAF6 TAFII-70 TAFII-80 p80 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa EMBV3_28755 AGCAGGATTTTCAACGTGAAATCTTCTCTGAGGGTGGCTATGATAAAAAGGCACAACTGC Gene GeneID:536741|MME:XM_002684999:113_cdna UTR3_Alt 2 NULL GeneID:536741 1 GENE MME NULL membrane metallo-endopeptidase EMBV3_00230 CTGCGAAGCGTCCTTGGCGTGCTCCACCTGCCACTGACATGGGCAACCGGACGGCCCCAG Variant GeneID:505159|FDX1L:NM_001080226:303_cdna 367^570 7 EMBV3_31252 GeneID:505159 7 GENE FDX1L MGC152067 ferredoxin 1-like EMBV3_05068 TTCAGAGGTCGAAGACGTCGGGAAGATGAAAGGATCCCTAGACCCCATCCTTCAACAGCT Gene GeneID:100336831|LOC100336831:XM_002687300:224_cdna Constitutive 0 NULL GeneID:100336831 5 GENE LOC100336831 NULL c-Mpl binding protein-like EMBV3_20423 TCGCTCCATCTTTGGAAATGCTGTTAGCCGATCGTCTGGTAGAGTCAGCTTCCTTAAGAA Variant GeneID:533652|MLH1:XM_002696937:499_cdna 784^896 1 EMBV3_22352 GeneID:533652 22 GENE MLH1 MGC140127 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) EMBV3_38041 AACAAGATGCACATATCACAGTCCATTGAGTTAGAATTTGGAGCTGGGGATCTGCAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05739 CTGGCTGTGCAGCTCTGCTTCTCTTTCCTGTAAGTTCAGCATGGGTGTGCCTTCATAAAA Gene GeneID:781106|NEGR1:XM_002686317:80_cdna Constitutive 2 NULL GeneID:781106 3 GENE NEGR1 MGC157347 neuronal growth regulator 1 EMBV3_15643 CTTCATAATCCCTCCATCCTGTCCCTGTCCCCAGGCCACTGCTGATAATGCTTTCTGTCT Gene GeneID:532685|SNX6:NM_001046331:29_cdna Constitutive 0 NULL GeneID:532685 21 GENE SNX6 MGC137462 sorting nexin 6 EMBV3_04465 CTGCACCTGGAGAAGTACAGCTTCCCCGTGGAGATGATGATCTGCTTGCCCAATGGCACT Gene GeneID:616379|SEPN1:NM_001114976:287_cdna UTR3_Alt 2 NULL GeneID:616379 2 GENE SEPN1 MGC138923 selenoprotein N, 1 EMBV3_38804 GAGGGACAGAGATACTCCATCCAGAACACCCAGGTTGCCTTCTGCTTCTCTGAAACCATC Gene GeneID:280804|GH1:NM_180996:167_cdna Constitutive 1 NULL GeneID:280804 19 GENE GH1 GH growth hormone EMBV3_34582 ACAAGCGGAAGCAAAAAAGGAAAACGGCCCCACTCTCAGTACCATCTCAGCCCTTCTGGA Gene GeneID:528253|JARID2:XM_002697579:437_cdna UTR3_Alt 3 NULL GeneID:528253 23 GENE JARID2 NULL jumonji, AT rich interactive domain 2 EMBV3_37975 GGTCTCAATGGGAAAATCAACCTTCGTTTCCTTGGTCACCTGCCTCCTCCGTTAGTGAAT Gene BVV0102_351918 - 1 EMBV3_30100 GK000011.2:2398017-2401654 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023737 1 XLOC_014350 Coding TCONS_00023737 XLOC_014350 Coding Coding NCAPH 11:2400493-2425685 j TSS17591 2463 1 TCONS_00023737_5 424 10 0.902623952999087 0.000275372255414871 5.21945300992804e-207 9.88955844670985e-212 6.68340038660477e-06 1.16927458533912e-137 0 8.06127983551903e-05 0.000302818906623002 4.54278229332491e-206 9.32337649498791e-06 7.83352819805261e-06 2.47272469456769e-06 2.63615384866537e-06 2.27245327291061e-05 0.000512757206129282 6.8123707330913e-05 0.00105853862500089 1.4492814989121e-05 1.76808880617944e-05 6.05270600031697e-05 2.54120713037014e-05 0.000114068957794827 1.97378537791453e-05 0.000267350065201561 0.00014890963520932 8.87826462850556e-05 0.000227992657061989 6.44725344494147e-05 6.58776234223996e-05 7.14485020785284e-06 XM_005212293.1 NCAPH PREDICTED: Bos taurus non-SMC condensin I complex, subunit H (NCAPH), transcript variant X2, mRNA. 0.0 4268 100.00 0.960211124644742 NM_001281710.1 NCAPH Homo sapiens non-SMC condensin I complex, subunit H (NCAPH), 0.0 1362 84.28 0.507511165245635 TCONS_00023737_5 sp|Q15003|CND2_HUMAN CND2_HUMAN Condensin complex subunit 2; 0.0 659 82.16 0.936320754716981 1 coding 0 0 0 0 0.0316189087858952 0.84466580648434 0.0227046536676182 0.661388698781641 GAGCAGGTTTGTGGCTGCTGTGGGCCAGCAGGAAGGAAACACGGATGGAAAGAGATGTAGTTTTGAAGAGACTTTTAGCAACTAAAGAGAGTCCAGCAATGGATTGAGCAGATAGAGTGAGGGAGAGGGAGGTGTCCAGGATGGCTCCTGGGTGCTGATTTGGGTTCCTGGGTAAACTTGTTTTCTTTGTTCTATCGAACACTGCCTTATACGAAAGATTTGAAGGTGGTCACTGGGAGCACAAGTTTGTGCAAAAGGTAAATCGGCCTAAAAAGTCGTTTTCAACGGGTAGTACTTTTTTTGGTTACCAAAATGACTGAAGGGCATTCAGTGTCAGGGACACTGAACAGTCCTACAGAGAGGGCAAGAGTGTCACATGCTAAGAACTGTTTCACCCTGAATGCCAATAGCACCCTTGCGAAGAGGCACTGTATAAAATGCAATGTGTTAAGAAATTATAGGATGCTCTAGGAACACTTGGGGGAACAGTCTTTTCTCCCATAATACAATTCTTTGGATGCAATGATGGAATGAACAGACAGGCAGCACAAAAACACCTGTCTCACTTCCAATCTTAACCTTACTTTTTTGACAGGGGATAAGATATCTAGGAATCTTTTAGCAAGAATATATATTAACGACAGTCTTCATTAAAGTACACACAATATTTTGCATCAGTTCTTCCCCCGCCTGTTAACGCTCTTCATTCCGGTGTCCGCTCCCTCTCACCTCCATCCCACATCCAGTCCATCACTTTCCGCCTCCTTAGTGGGTGTTCTGCTGCCCTCACAGCACAGGTCTCAATGGGAAAATCAACCTTCGTTTCCTTGGTCACCTGCCTCCTCCGTTAGTGAATTTCGTGAAATCAGAGGTGCCGCCGGCTCAGCTCCACGCTCGGTTCTTAGGACCCAGTTTCGCGTCTAGCGCTTGAAAGGATGGAGTCTCCATACTATTTCGGGGGGATGGCGTGCTCCACAGATCCACTACGGTCCACCCTCACGACTCGAGCCGCGAGCCCTCAACCCTGATTTCTCACTTCCACGCGCTGGGCGAACTCTCCGCGCGGGGGACTAAAGCGGTCTGCGCAGGCGCGCCTCTGGCCCCGCCCACGTTGGCGTCATCACGGCCGTTACGGCGACCTGGCGTCTCGGCGCGCAATTTAAAACCAGCTCTGGCGACGCGGAGGACAAGATGAGACCTCCCTGCTCTGGGCCCCGTGGACGCCACCACAGCACTGCCTCACCTGCAGAGTGGGCGTTCCCCACGGCCCTGCCCCGGAAGGCCCCTCTCAACACTCCTGGCACCCCAGTCCTTGAAGACTTCCCTCAGAATGATGATGAGAAGGAGAAGCTGCAGCGGAGGCGCTCCAGGGTCTTTGACCTGCAGTTCAGCACAGACTCCCCACGTTTGCTGGCCTCCCCCTCCGGCAGGAATGTTGAAATTTCAGCGACAATGCCCAAGTTTACAAACACACAGATTACTGAACATTACTCCACCTGTATCAAACTGTCTACTGAAAATAAAATCACCACCAAGAATGCTTTCGGCCTGCACTTGATTGATTTTATGTCAGAGATTCTTAAACAGAAAGATGCCGAACCGACCAACTTTAAAGTAGCTGCCGGCACTTTGGATGCCAGCACCAAGATCTATGCTGTGCGGGTAGATGCCGTGCATGCCGACGTATACAAAGTCCTAGGGGGGCTGGGCAAGGACGCGCCACCTCCGGAAGAAGCAGAGGACCATGGTGCAGATGGAAGTGCAACTGAAACAGGAACAGCCAAGAAGGCCCCAAAGCCAAGGAAGAAGCACTCGTGCAAAACCATCGAGCAGAATGTAAACAACCTCAATGTTTCCAGCGCTGATCGAAAGTGCGAGGTCGACCCCATGTTCCAGAAGACGGCAGCCTCGTTTGACGAGTGTAGCACAGCAGGTGTGTTTCTCTCCACCCTCCACTGCCCAGACTACAGGAGCGAGCTGCTCTTCCCCGCCGACATCCAGACCCTCTCCAGCGGGGAGCCTCCCGAGCTGCCGGATTTGGGCTGGGTGGAAATGACCGACTTAAAAGCGGCCCTGCAGCAGTGTGCGGAAGATCGCCAAATCTGCCCTTCCCTGGCCGGCTTCCAGTTCACTAAATGGGACAGTGAAGCACATAATGAGTCAGTGTCGGCCCTGGTGGACAAGTTTAAGAAGAAGGATCAGGTGTTTGACCTTGATGCTGAGGTGGAGGACAGTGACTGCGAGGACTTCCCCAACGGGCCCCTGGAGGATGACTTCGATGCCAATGATGAAGCAGACCAGACTGAAGCTGGGGATCGCACCGAGCTCAGGAGCTGGAAGGAGCCCTGCCAGGTTCAAAGCTGCCATAGGAACTACAGCAGTGTTAGCGGAGCCCTCGTTTGTGGGAAGATGGTGAGCAAGAACTGTGACAGTCGTGTCATGTGGCCGGAAGCCTTGTGTGTG EMBV3_10876 TGACGTCCGAGGCACACCCCGTTTTGAATTGCAAGGACCAAGGTGACTTGACCTGTGTAT Gene GeneID:532209|MECOM:XM_002684943:186_cdna UTR3_Alt 2 NULL GeneID:532209 1 GENE MECOM EVI1 MDS1 and EVI1 complex locus EMBV3_39290 TGACCAAGCCCTGCAGCCCCAAGACCAAAGCCAAGGCCAAAGCTAAGAAAGGGAAGGAAA Gene GeneID:280852|MDK:NM_173935:18_cdna Constitutive 0 NULL GeneID:280852 15 GENE MDK NULL midkine (neurite growth-promoting factor 2) EMBV3_14977 CTGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGTTATCTGAGGATCACGGGTGCAGTC Gene GeneID:613278|CCDC149:XM_002688156:34_cdna Constitutive 0 NULL GeneID:613278 6 GENE CCDC149 MGC140504 coiled-coil domain containing 149 EMBV3_22782 AAGCGCTTTGGAATGACACGATCACTCCCGTTGAGTGGGCACCCAAGAAGCCATCGGGAA Gene GeneID:791046|MIR425:NR_030967:351_cdna Constitutive 0 NULL GeneID:791046 22 GENE MIR425 MIRN425 bta-mir-425 microRNA mir-425 EMBV3_28512 GGAGGTGTAAGCCCGAAGGCCGGAATCCAGGTCCCGATCAAGACCTCGGCCACGTTCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26131 CAGGGTTTCAAACGGCTGTTCTCCATCATCTGGTGGAAATGTCTGTTTAGATTTCTGTGC Gene BVT0101_028806 + 0 NULL GK000004.2:67654340-67767892 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184365 TCONS_00184371 TCONS_00184367 TCONS_00184368 TCONS_00184369 TCONS_00184366 TCONS_00184370 1 XLOC_111332 Coding TCONS_00184365 XLOC_111332 NonCoding Coding CREB5 4:67762824-67768496 j TSS137311 5369 2 TCONS_00184365_13 85 2 0.053606065949568 0.000132324416830558 3.38848679157213e-05 0.00026740728716003 1.70667922012621e-47 0.000227259166180257 1.73604594644544e-34 0.000142251148866834 0.000506835532425044 0.000538283978245777 1.02570739748553e-34 5.48808847419849e-06 0.000172395522558106 1.55666135316864e-20 4.64649870728043e-18 0.000228695944876067 5.97120833778121e-05 1.23629057095319e-08 1.80749907139296e-08 2.46246314037967e-06 0.000210357623243141 2.46255181123444e-14 0 0 4.16164658677276e-18 9.30602065885397e-05 0.000482716638853569 2.26821425251182e-43 4.29927271501742e-13 3.74367525662529e-33 5.07003770306513e-09 XM_005205545.1 CREB5 PREDICTED: Bos taurus cAMP responsive element binding protein 5 (CREB5), transcript variant X3, mRNA. 0.0 3775 100.00 0.389644254051034 NM_182898.2 CREB5 Homo sapiens cAMP responsive element binding protein 5 (CREB5), 0.0 3137 78.42 0.699944123672937 0 noncoding ATATTGGAACCTGGAACATCAATAGGTTCAATGCTAATTCAGTAGGGAACAGTGGGAAGAGTGGGGATTTACAGCTGAAGGTCGTTTTCTTTTCAAATAATTTTTTAGATTGAGCAGCACAGATTCTCCCACCACATGTCCAGAGAGTAGCCCTCCTGCAAGTCCCACCCCCGCATGCTCACAGCAGCAGGTCATCCAGCATAACACCATCACCACTTCCTCGGCAGTCAGCGAGGTGGTAGGAAGCTCTACCCTCAGCCAGCTCACCACTCACAGAACAGACCTGAACCCCATCCTCTAAAATCTGTGGGTCGCACCTTGCCTTCAAGAAGAGCTGTTGCATATCCTGCGTCCTTTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGCCCTTCAAAGACTGGCTTTCATTTTTATAGTTATTATGGAAATGTTGTCTTTTATACTTAGTTATATAAGAAAAAAGGGAGTTATGCAATTAATAATCTATCAGCTTGGGAAATGCTTTGGTGCTTTTCTCCAATTTTCTGGTACCAGTTACTTGTTTATAAACTGAACTCTTTCTGTACATAGTCATGGTTTCATTCTTATCAGTCAAACCCTTTGCCTGAAATGTTGAATCTTGTTAAACTGCAGCTTTTAGCCAAAATGAGGCGTGCATAGATGTCCGGTAAACAGATTGCAAGGCGACTGGGGGGTGGAGTCTGATGACATCATAACTCATGTTGAGTTTGTGCTATGATGTCACCAGAATGCCAGGTAAACATAGAGCCTTTTCCACAACTGTTTCTCTTACTATTAAAAAAATATTAATAGAAGCTCCATTGATGTCCAAATAAAATCAGCAAGGATCTCGCCACTCCTCCTCCTCCTCTTGGTCCACTTCCTTGACTACCCAATTTTCCTTTCCATTTCCACTTTACCTGGGCTCCCTGTTGACTTTTTATTGTTACTTTCTTCTATTTTATTTTTTCCCTTTAGCATTGCATGTAAAGAAGAAAATAATGTTTAAAGGAAAAAAAAACCCTAATGTGGACCTAGCCATGGCTTCCCTTGCATGTGACCCACAGCTGGAGTTCATTCAACTCTTGCTTTTTACACAAGAGTAACCAGGAGACGTTTAATGTGCCTGATTTAATGTTTTTAATAATCAGAACAAATAAAAGGTGGCTTAGCCATAGGTGAAGCACTGTTGAATGCCAGCTGTGGAGACACTAGGGAAGGGAGCTTTATAAGCCTCAATTGTGAAAGTCCAAATTACGATGCAAGGCTATAACATCACACCCTCGAATTACAACTGGTTTTATATGGCCTGTCTATAATGTCGAAAATCCATGTACTATATAATAATGCAGAAGGGCTCTATTCACTACACGGATTACATTGTTCAGTCATCAGCTGCTAATAGCCTAAGATTTATTATTGTTTTTTTCTTAAGCCTATGGAACCGTCTTTGCTGTTCTGGTGGGTGAAAGTGGACAAACTACTGGAGGAACAAAGAGAGAAAGAAAACCTCATGTTTCCGTAGAGCTGCTCTCAGCCCTTCCACCACAGTTAAAGCACTCTGGCTGTTGAAAGGATCCCATGGATATGGCTACTCCACTCTTCTGCATAATTCTGGTTTACATTTTCAGCAACTCTTCTGGACTTTCCCATTATAAAAAGCAGACAGTTGTGCCTCCTTGAAACAAGCCATTTTACTTGGTGAAGGTTTTCATATCACAACTCACAAGTAATGGGGGCTAATGTTTCCTCTAGTGCTCTAGGCAGGGCTGGTGTTTCATCTCTATGTGAATGCTTGACCTCCAAACATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAAAGGGAGACAGAGACAGAGAGAGACAGACAGAGAGAGGGGAAGATTATGGGATTTAAAAGAACAGTATTTTACAAAATGTGTAGCTTTTTTAAGAGTTCAGAATAGGGAAGGATGTGATTTTTTTTCTCTTACTGTAGTATAATAATCTATTTTGGAGGAAAAAAGAAAATATAAGGGTCATGAAGCATGGTTTTTATAACTAGTTTTAGTTTTATCTAATAACTTGCTTTTTAAATCAATATTTATCAACAATCTTTTCATGTATGCAGTGCTTTCAAAAAGAAAGTTTTGAGTTTCCAGGAAAGCTCATAACTTGGATATATGATCTAAAAAAATCAAAACAAAAACAAAAGCAAAAAAAAAAGAGAAAAGAGAAAAAAAGAAAAAAACAAACGAGAAAAGGATTTTCTATTATATTTTAGACAAACATATCATTTTTAAGTATTTTAAATACTGAATTCATGATTGTTTTATTTTGTTTTGAATCCCAGCAGGAATAGCTAAATGGTTTAACCAAACTGGCTTCATAAGAAGTTTAGGATTTAGCTCAAAAAGCAGTTAATAGCCTTATCTCTATTTTGAAATCAAAAATAATTTTTTTCTAAACTCCTTCCTAGGACCATTTAGGTGTCCCCCTTAAAAGGAGAAAGAGCTCATTGAAATATTTGTTTGGGTTTTTTAATTTTTATTTTATTTTTGTTTTGCTTTAAGTGAAAAATATTTTCTTTCTTTCCTGCATGCATAGCACTTAATGAAATGGATTTTTTAAAAATCCACTGGTGATATCAGAATGTCCAAGGAGTGGGCTGTCACTAAAATTATGGTTTACTTTACTTCTGTTCCACCTCTTAATTGAAATATTTAGTTGTGAAACCGAAAGCCTCTGCCTGAGTTTTCTTAATTCAGCAACTTGACAGTTTGACTGATGTGCATTATGTATAGCTCAATTATGTCTGTTTTTTATGCTAAGTAGGCAAACCAACCACACACACGTTAGCAAATGGGCCTCAACGTATAATTAGAATACACTGTCTTCTTGTTATACTCAGGGCCTTTAGGTATGTTCATTAGTGGTGTGGAAATAGATTAAATGGAAGATGCCAGCGAGTCATCAGCGCTTCTTGAAATCCTGAGCAGAAAGGCTCACTGGTCAAATCTAGCACTCAGCTTATCAATATGAAATATTTCACTTGAAAGCTTGGCTTTCATCAGACCATCATAGAATCATTGGTCTGCCTGAACATCTATCCTTCTTGCCCCACACTTTTTGCCAATCTGAGGAAACATTCTGCCCTGTTCTCCCCTCCCTCCCAGCTACTAGGCCACTCATTCATATTGTCATAGATGGGTTGCAGTGACCTTCAGCGCACGCATGCTAGGAGGGGAGGGCTGGCAGCAATGCGCTGCCTCTCCTTGTTCCCAGGTGGGTTGCTATCAGCAGAATCTGCCTTTGAAGACACTACCAACTTGGCCTGGAAACTTCCACAGCACCTCCCCTGCCTCCTGTGATGGGAACTAGCTTCCAAGATAGGGACGCCTGATAGTGTTCCTGCCGCGTTGGTTGTCACCTACTCTGAGCTATTCCCATCTCAATTGTTCCTCCTAAAGACATTTTTCAACATATACGGGGACAGTAGAGTGGAAATCCTCCCTGTGGATGAATGCACTCATTTTAAGGCCTGGTGTGAGGTTGAATGTTTTCCCTTTTCCCTTCCCCTCAGCCCTCTCCTGTCTCCGCACATCAGTGTTTACCCGTCGGAGTCTTTACGCGGCCTGTGGGGATGAGCAATTTGTATGCTGTCACTGCCTGCGTCCTTATCACAAGGGTTACTTACTCGGAGCGGTTGCTGTTTGGAGCCTGTCGGGTTCATGAAATCGAGCGCAGCACGTGTTCTGAACGGAGGGGCATCCACGGTGAATGCTCAGGTAGTTGTGCTCTGTTAGTTCAGTAAATCATCGTGTGTCAGTTGAGTTTGTCATTAAAATCAACCAGCTGTGAGAAAAGACCAGCCATTGGCTGGGGGGTTTTAAGCATCTATAACTGCTATAAACCTAGCCATCCAGTTAGGATAGAATGTGCTTCTTTCTGGTTAATAAAAACCATCTAAGAAAATATATATGTATGTATGTGTGTATACAGTGGAATTCAAGGACCAAAGCAAAATTTGAACAGGAATCTATTAATTTAGAATTTTATAAGATATTTATTAATAAATGTTATTTTTAAACATTCCATTTGAACAATATTCTTCTGTAGGCTCTACTTGTTTTTAAAGGATTAGTTCTTAATTAACTACTCTCGATGTGTATATCTTCCTTTTTCAGGGTTTCAAATGGCTGTTCTCCATCATCTGGTGGAAATGTCTGTTTAGATTTCTGTGCATAGAAATTTCAAGGATTTTTATTGTTCTGTGAGTTGTTTTTTAATCTATGTTCAGAACAGTTTTAAATCATCTATTTCTGTTTTTTTTTTTTTTTCACTTGTAAAGTAAGCTCTTTCCTTTAGGAAGCAGAGTTCAGCTAAAGGGAATCTGTAACTATAACTGGAACAGCTCTCTTGTTAAAGTGTAAAAACAGCTTCATCTCTGCTTCTCCCCACTGCACTCCAACTTCCTAGAATGCCTTGCACTATTTAGCCTTGTTGGTGCTTTTCTTGTCCCTTCGCAAACCGTGTGCAGTAGCTTTAAGCCATTCAAGTTCCATTATGCAGTGTATCTGAGAAGGGAAAGGAAACGACATGTTTAAATTGGAATAAAAATGTGCCTATGCGAACAGTAGCGACTTAGAATCTCTCTTCTGCTTTTAAAATAATTTATATTTTAAAATTGCACTTTAGCGTTTGTAATCTTTGTCAGTTTCTCTCGTTCTCTTTCGAACCTCCTCCCTGTCCTCAAACTTGCCTTCACTCTTTCCTTCCCAGCCCCCTACCTCCCCCAAGCTTCCTCTAAGGCTCTGAACTGCATCATTTAAAATATTTTATGGAATATGTGCCCCAGGTACATTTGTGTGCATTCACCAGTAGCATAGCCAAGACGCGTTACTCACATCCGCCTAGGTGAAGCCTGCTACGAGAATGCCAAGGAAAAGAGCCAGTTTATACTCTTTATCCCTTTATTCATAGCATGATTTTTTCAAATGTTATGTAACAGACATGAAGCAGCAACTATGCTATACTTAAGAATTTTCTATCTCATCCTCCAAACCAAAGTGTCCTGAAGGAGCCAGGAGACTTATTCTTTTGTGCGTCACTGTGCATGTTGGACTGAGGTCCTCACCATCGTCTCTTTGGGCTGCTGAAAAAACTGTGGCCCTAACCATTTCATTCTTGGTTTCAAAAATACAGTGTTGCCTTGTACCGTAATTAGGGACAGCACCTCTTTTTTACAATTATAATCTAAGAAAGGACAAGAAGACACTGAAGCAATAAACTTAAAAGTAAAATCCAATACCAAAACAAAGAAAAGAAACAAACAGAAAAAAACCCTTGCTCATC EMBV3_23249 TCAGATCTTCAAGATAAAAATGAATACAAGGATTTGGAACTTGGAAGGAATACAGACAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15512 ACTATATCCGGGAGAGTGGCAGCTTCCGACCAGTGGTCGTGCTTCCGGAGAGACGCTTCC Gene GeneID:616117|LOC616117:XM_002689772:46_cdna Constitutive 0 NULL GeneID:616117 8 GENE LOC616117 NULL similar to Uncharacterized protein C8orf58 EMBV3_03075 TGGGTACGTGTGCGAAACCGAATTTCCTGCCAAAGCAGTAGCTGAATTTCTCAACCGACA Gene GeneID:505849|TFAP2A:NM_001080228:208_cdna UTR3_Alt 2 NULL GeneID:505849 23 GENE TFAP2A MGC151772 transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) EMBV3_41000 GTTATACATAGCTCCAAGAAAGACTTGCTAAAGAATTATTCTGTATATACATAAGCCTGG Gene BVT0102_375638 + 0 NULL GK000005.2:31899736-31915389 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42117 TCTGTCTACACAAGCTGATGCCCTTTGCCCTTGCTGTTAGCTATGGTCCACCTCTCCCTT Gene GeneID:785540|LOC785540:XM_002698398:311_cdna Constitutive 0 NULL GeneID:785540 26 GENE LOC785540 NULL similar to cytochrome P450, family 2, subfamily C, polypeptide 19 EMBV3_31761 ACCCTACATTATCATGGCACTGGGTGTGTTCTTTGGTCTGATCTTCACCTGGCTTGCGTG Gene GeneID:533177|SCARB2:NM_001102153:86_cdna UTR3_Alt 2 NULL GeneID:533177 6 GENE SCARB2 MGC140207 scavenger receptor class B, member 2 EMBV3_32070 GGTTGGAGATGATGAATCAGATGAGAGGTCCAAGGAACAGTGAGGAACTCATCCTTCATC Gene GeneID:100336208|LOC100336208:XM_002695341:59_cdna Constitutive 0 NULL GeneID:100336208 18 GENE LOC100336208 NULL ZNF679 protein-like EMBV3_09828 CATATGCGTACTGCCTACCAGAAGATTATGAGGACGACATTGGTGCTGGGACCGTTGGGA Gene GeneID:516325|TIMM13:NM_001080277:57_cdna Constitutive 1 NULL GeneID:516325 7 GENE TIMM13 MGC155191 translocase of inner mitochondrial membrane 13 homolog (yeast) EMBV3_11429 CAGAGTGAAAACTGCAGCAAAAAATACATGTTTCCTTACAGATTCCAGAGAATGGATTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21132 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38165 AGATGGTGGAGGGTTACACTTATTTATGAAGTGGACTTAGCAGTTTTAAGCAGAACCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13299 GTCGTGGCCATCTACTCCACCTTTTTGCAGCGCGGCTACGACCAGTTGATTCACGACGTG Gene GeneID:790849|LOC790849:XM_002683885:1_cdna Constitutive 0 NULL GeneID:790849 Un GENE LOC790849 NULL similar to 1-deoxyxylulose 5-phosphate synthase EMBV3_24986 TAGTGGGGGAGAGCCCCGCGTAAAGTCAGAGGTTTAGGTGAAAGCACAAGCAGAAAGTAG Gene BVV0102_136317 - 1 EMBV3_00884 GK000014.2:40531577-40936274 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134876 TCONS_00134877 TCONS_00134878 1 XLOC_081568 NonCoding TCONS_00134877 XLOC_081568 NonCoding NonCoding - 23:31103865-31107831 - TSS100460 3966 2 TCONS_00134877_3 104 0.301059001512859 1 0 0 0 3.3614476544525e-15 9.5941761560716e-22 6.09613449321502e-21 1.28694291605463e-20 3.84082746709463e-15 8.6996932475596e-20 2.16167140483215e-21 1.61594493139293e-05 2.21816493060411e-05 0.000112516702463313 3.44719630312864e-10 4.61338084777687e-05 0.000128768902561206 3.60204353483715e-10 4.20945687677168e-10 6.69577326738751e-13 0 2.82314950024578e-10 3.71162993549208e-16 0.000354642936957241 1.72951378125587e-10 0.000319391619788706 4.03526912369282e-22 1.92345785152099e-19 3.55589647416915e-21 1.60434669867432e-05 0.000153186116867957 0.00033091089253408 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 5e-164 583 94.95 0.0935451336359052 0 noncoding 1 1 1 1 -0.595416926795943 0.174418025970049 -0.0383345061947562 0.593236167095668 CTAAAAACACCACAGCGGAAAAAAAGGAAAAGCACTTGTGTCCATAAATAGGGTGCTTTCTAAATAGGGTGAGAGAAAGTCCCTGAGGGAAAGAAAGGAAGGAGAGGTCCAACTCACACAAGCCTGAGACATAAGCACCCTGCATTCTCTGTAGAGCAGCATTTTCTTTCCTTCAACTTAACTGAGCTCATTTCCTTGAGACTGAGAAAATCCCTAGCTCTCTTCCCAGATCAAATTAATACTGGGAATTCTTCAGCAAACCTGCCAGTAATTAGGATGGCTTTGGGTGATCTAGAAGGAATGAGACAAAGAAAATCTCAGAAAATTAAGGACATCATTTTGGCTCTGCTGAGAAGCTTTTTATGGACAGCTGCTGTTATATGAACTCTTTGTTTTCATTTTCTATCCATCCTTTCCTCCCCACAGCCCTACCTGATAATGTCCTCCACATACAATAAAGTCATGTGTTGGCCACATACTGTTGGGAGACTGCTTCCATAAAGCATTGGATTGGAATCCCTGCATATTAATTCATTCATTGTGGGGCCAAACAATATTCATAAAGAACTTAACACGGAGCCCTGGTGATAAACTATTGAACAAGATAGTTATCTCCTCTTGGAACACAGTGAGGGCAGGGAGGGACGAAGGGAGGAGACTGACATTAATTTAGAATAACTCCAGTAACTAATTAATCATAAGAAACTGATTAGGGACATTGATGGAAAAGCAAAAAAAAAAAAAAAGGATCATGGAACAGAGAAAATAAAATCTGACTTAGACTGAGAGGAATATGTTGTATGGAGACAGAAAGTCAGGAAAAGCTTCCCCAATGAATTCAGTGGAAAGCTGAATGAAGCAGGAATGAAATTTAACCAGGTATAGAGAAGAAGGGAAATCATTTCCTACCAAGGAAGGAGCACTCCAGGACTCTGTCTCTAGGGTCAGTGTTCGCAGAGCCATCCGTGAGGGGGTAGGGGTGGACCATAGGGCTTCCAGGCCACACAAGAAGCACTTTCCCCTCTGGCAACCTAAACCTAGGTAAATGGAGAAAGTAATTTCAATGAGATGTGAGCACCCGAGACACCATATTTTCTGACAGTTTCAACTGGGCGGGATGAGTCCTGGTGGGGCTGAACTCAGAGGTATGGGCAGAATCAATCCATATTCGTTGCCTTGAACTGACTTCTGGCACCTGGTATGAGGCCAGATTACACGCCAAGCACCCAAAGATTCTGACCAGTTTGGCCAAAAATGGGAACCAGTAAGATTCACTTCGAAGCAACCACCCTCTCTGTTTCATAGCTGGAGGTCTGAGGACCACACTTTGTAAAACTAAGCAAGAAACTGCATGGATTAGAAGTGGAAGTGAGAGTAGTGATTCCACGAGTGTTAGCAACCAGGAGAGGAAGCATCATGTTTGAAAAATTGCACGGAGTGAAACAATTTTTGTTCCTTTTGGTTTGTTTGCCAGGGGCAAGATGTTGGAAAGTGGAGGAGAGAATAAGGCAATTAACTGGGAAGGCATTTCTAAATAAGGACGGGAACCAAAGTGCCTGTTTCTATGGATGACGGGAATGGATGTTCCTGTGAAAAGAGCAGAGGTACAGCCCAGAGGCAGGTGTTTTTCTTCATGGCTTTCTGTGATAGTATAGTGGTTAGTACTCTGCGTTGTGGCTGCAGCAACCTTGGTTCGAATCCGAGTCACGGCAAGAGCTGCATTGCTCATAAGCACCTCACTGTTTTTGCAACATTGCCATGGAGACAGCCTCGGAAATGCCTTTGCGAGATCGAAGACAAATGTTCTGCATCTTGCCCGTACTGGCCAGTAATGGCTCTTTTTTACACTCATATTTATGGATTCTTAGATTTCATATAGGATTCTATGGTGGATTTCATTTTCTTCCAGATTTATCTCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCCCCAGTCCCTGGGATTCTCCAGGCAAGAACCTCTAGTCGTCATAAAAGTCAAGGAGAAATAGGTGACAACCTGATGCTTCACATTGCCTCACAGAGCTACACAGTATATGAAAGTGGATCTCTCAAAGAGAAATCAGGGGAAAATCATATATTCTGTCTCATAAATAGCTATTAGAAGCCTAATCTACAAAACACCGAAACCTCACTCTGTTTGCCTTGGAGTTGGAGAAGAAACAAACAAAAAAAACACATATCTTCGTAGCTGGTTCCACTGGGGATCGAACCCAGGACCTTCTGCGTGTAAAGCAGATGTGCTAACCACTACACTATGGAACCAAGAGCTACCAGGTCTCCTGTCCCCAGATACAAAAGTTTCTGGCAAACTATATCAGCAAATATAATTATTGATTCAAAGATAGGTAGCTTTGAATACGGAAATTTTTGGTGCTTAATTACATTTCTACTGCATTTCAGTCTCATACAAGCTTAAAATATCTTCAAGTTGCATCATTTGTGAACACACTATTCTTGATTTGTGCCCCTTTGAACACTTCTAGATTAATCTGTCTGTGAACACATGATTCTTGATTTGTGCCCCTTTGAACACTTCTAGACTATATTTATCCATTCACTCAAAGAGTATGTATGTTGAACATGTGGGCCAAGCGCTTGTCAAAGTGCTGAGGATAGAGCAGTGCAACAATCAAAACCCCTGTGTATACATACCTGATCACCTTATCTTACCATGCTGTAGTTCCTAGCAAATAACAGGTGCTGAATAAATGTATCTATTTCAAAAGAATTATAAACAAAATTAGCAGCACTCTCATGACCTCTCTTTTTTGCAGCTGAGTTACAGCTAGACAATTGGGGGATGCCGGGAGCCGGCATATTGCATATTGAGTGCATATTGCATATTGAGTGCAGCACTTTCCACAGCATCATCTTTCAGGATCTGGAATAGCTCAACTGGAATTCTATCACTGCCAGGAGCCAGCGTGAGGAACTCCGCCCATGACAAAGGTCAGGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGGGTGTCCCTGGAAATTCTCAAGCATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTACAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTAACCTACAAACTCCTTTGGAAATCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGTTCAGAGCCGCCCAACTGTGAGAGGCAGGAGATGTTCTAAACTGTCTAAACACAGATTCTTTTGAGTAGTTAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAATTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGTTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAAGGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTTAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAACTTTTGCATATGATAAGTTTGCAGGAAGAGAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATACATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCACCATGTCGTTCTTTCTCTTACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCAT TCONS_00134882 s 3' 4066 TCONS_00134882 s 3' 4066 EMBV3_09805 ACTTCCTCTATAAGCCACTGGACATCCCTGACCACCACCGCCAGCTGCCCCAGTTTACCA Gene GeneID:510379|MON1B:NM_001037454:23_cdna UTR3_Alt 2 NULL GeneID:510379 18 GENE MON1B MGC126906 MON1 homolog B (yeast) EMBV3_29691 CAGAATACGTGGAGCAGCTGGTGGCAGGGGAATCGGAAAAGGAAGTGAGAGCTTTTAGGT Gene BVT0102_041490 + 0 NULL GK000002.2:878050-916154 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03766 ACTCAGGAGCCATGAGCGCTCTGACATGGACCCTCGCTTCTTATACTTGTGCAGCAAGAA Gene GeneID:506958|PQLC3:NM_001101878:72_cdna UTR3_Alt 2 NULL GeneID:506958 11 GENE PQLC3 MGC148919 PQ loop repeat containing 3 EMBV3_08780 CTGGGCCTTGCTTAGATCACTGGTTCCTCAAGGGCAGGATCCCCAATTTTAGCTTGAGTG Gene GeneID:100301467|LOC100301467:XM_002696027:479_cdna Constitutive 0 NULL GeneID:100301467 19 GENE LOC100301467 NULL similar to P300/CBP Associated Factor homolog family member (pcaf-1) EMBV3_05558 AGAACAGGTGGCAGTCCTTGTTTTGTGGTTGTAGTCAGCTTCCCTTCTGAGCACCCAAGG Gene BVV0102_142905 + 0 NULL GK000018.2:34215941-34260149 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29932 AAGGCCGTGGACCAAGAGGCTAACAAGACAGGTATGGTGCAGAGACTTTTGTTACTTGCA Gene BVV0102_010986 + 1 EMBV3_32152 GK000010.2:11157047-11332414 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019267 1 XLOC_009947 NonCoding TCONS_00019267 XLOC_009947 NonCoding NonCoding - 10:11271033-11274317 - TSS13157 3284 2 TCONS_00019267_5 92 0.427527405602923 1 0 1.89888683141871e-06 0 2.34825222543902e-07 0 1.50340344381202e-06 1.61487438620484e-06 0 2.1449098300423e-06 6.2495511744187e-06 1.80224169189755e-06 3.94394211324038e-06 3.13943069964945e-06 2.28379547691073e-06 7.82617064042856e-05 7.8636960881279e-06 0.000560004029377749 0.00012946884589306 0.000322013682139746 0 7.38905955063181e-06 0 0.00026733188407458 0.000551473563369876 0.000350153930208745 1.05488412117615e-06 1.78782704691345e-06 2.5487900192e-07 1.68909958180705e-05 2.2444317954877e-05 5.428381446646e-06 XR_227695.1 LOC101908400 PREDICTED: Bos taurus uncharacterized LOC101908400 (LOC101908400), 0.0 1121 73.44 0.520401948842874 NM_001007253.3 ERV3-1 Homo sapiens endogenous retrovirus group 3, member 1 (ERV3-1), 6e-10 71.6 73.73 0.0356272838002436 0 noncoding 1 0 1 1 0.00699599191683453 0.974485310766707 0.00219601864676713 0.965106292746534 GATAAATCTTTTCAGGTTATACTGTATGGTTGATGTTACTAATATAGATATCCTAGAATTATGTGAAATTCATATACATCTGATATGCCCTGATACTGTATTAAACTGTTATGACCAGGTTTCTTTGTCAATTGCAATAGAATCAGATTTTAAACATGCTTCTATGGTTTTACTCTCAGGCCTTTAGAAGAATACTGCTAGTTCTTCAAGATTTTTGGAAAAGACTTTCTAACATTAAGCAGATAAACAAATTTTGTTATTAACAGTAAGCTGGTACCAGAGTGGAATTTGGTCTTTTCTCTGTTTAGAGAACAAAGTTTTCTTAGAATGCAGCTTTTGATAACAGATTATGAATTTCTTTGTCTTTAAGTGATTTATATTTGTTTTTAAAATGTTTTTGTTACTTTGGTAAAGTAAATAAACATTATTTAAGATTGCGGGACATGTAGACAAAGCTCATTCTGCTTCTACAAAAAATAACTCCTCAAGGTTAGACTTTTGCTATCCAGATAGCCTTAAAACATGGCAATAGTCTGCTCCTAAATCAGGAAATTAAAAATGGATGAACAACAGCTGAAAATCAAAAAGCCAGGGCTATAGGAAATCCAGGATGGCCACTTGGCTTTTCCCGGCTCCCTGACAGACCTTATTTTTATTTGATGGGTTAAAGACTTCCCTGGCTACAGTGTTAATGCCCTCAGAATGAGTTCTAAAAAAAAAAAAAAGAAAGAAAAAATTATGTTTCACTGAATATTAACTTCTAGTTTTGTTAATTAAGGTCTGTGCTTACTAACTTTCACTTCTGAAATAGTTCCTTGTTATGTTACGTCGCTAAAAGATTTAATTAAGTTATTAAAAAGGACACTCTAAGATTGTTTCTAAAGCTTGTCTCAGTAACCAGTCTTTGGATAAAGGTCAGATGCTCCATGCTCCATACACCAGGAGATAAACACTTGGCTATTATCATTTAACTGAGTCGGATGACCTGGGGTATACCAGGCTATACCCAGTGAAAGTTCTTGACTTGAATTCTTGCTTGTGACCTTACTAATAACAGCTAGCTATATTATTTTCTATGTAGCTTGTTTCAGAAGATTATTTCTTACATTACCAAATGTGTGACTGAGCCTGTGATAAAATGCTGATATGTAGTTCCATATGAGATCAATAACGGTAATAATGTAGCTCTAGATATGAGAAGCAGCAGCAAGAGGAAAGGCCGTGGACCAAGAGGCTAACAAGACAGGTATGGTGCAGAGACTTTTGTTACTTGCAAGGCCTGGCCTAGTGACAACACACTGAGTGACCTGTCAGTGGAATTTTTGTTAGACCTGGGAATGAGCCTTCCCAGCACCGCGGGTCACAGTGACCATGAAAGGCCCCCAAACATGGTCAAATATGTGGCTATGAAGGGGCCCTGTTGATTGAAAGTTGGCCCTTGCTGGCTGCCTCTACAAAGATTGAATCATGACCACTACAAGATGCTGACCTTCAACACCCCCTTTGAAAGGAGTTCAGGATAGAGACAAAAAATAAGGCACTCTGTGCTCTGGGAAAAAAAGAAAACACACACACATACACAAACAGGCCTTCAGATAGTCAGATGTTTTCAGGTAAAGATTTTTATGAGTCCAAATTCTTGCATCTTCTCATACCTAGAGAAACACTAATGTCATGAATCAGTGTCTGGACCTGGTTCTCCTGGCTAGCCCCTCAGCAGCTTTCCTAAGTCTATTGATCTTTGGACCATATATCTTTAACTTTCTTGTTAAGTTTGTTTCTCCAAGTAGTAGTACAACAAGAATATCCCCCGGCCAACACCCAGACAATGCTAGAACAAGCTGCCTTATCATTCTGTGGACTCTCATCTCCCTCTGTAAATGCACCCCGAGGTCCTCAGGCTAGTCTCCCTTTGAGGTCTTATATGGGAAATCACCCCCAGTGATAGAAAAGCTCAAGGGAGACCACCAGCAACTAGCTGACCTGGAGATGTCCCGAAACCTCCAGGCCCTGGAGAAGTTTTCTGCCATATAGCCCGAGAAACCTTAGAAAGGACACCCATTTATTTGGGCAATTGGGTTCATCCCTATCAGCCAGGAGATGAGGTATAGGTTAAAGATTGGAAGAAGGAACCACTTAAGCCAGTTTGGACAGGCCCTCACACGGTCGTCCTGGCAACCCCTACTGCTGATAAAGTTACAGGCGTCATCCCTTGGATCCACCGCACCAGAGTCAAGAAGGCAGCGGCTTCCTGTGATGAAGACACCTGGAAAACAGTTCAGGACCCCAAAAAACTCCCCAAGGTCCAGTTCCAAAGACAACAGCCCTCACCCACAAAGGATGCTGATCTCTGCTGTAGCCACTCCAGAAGCTGACTAGTCAGTGCACAGCAGAAGCTTGAGGATTCTTCAGCCTTGCTCCAGCCACACTCCGGCAGCTGGCTGGTCAACACATGGAGGAAGCTTGAGGACCTGGCTATCAAGATATTGATGGATTTTCATTGTCAACCCTGGCCTGTATCCCTACTCAGTATTATTGCTGTGCTCTTTGTTACAGGACCAACTAGACTCCCTGGCTTTACAGAACTGTAAGACTCTGGTTTTACAGAATAGGAGAGGGCTAGACCTACTGACCAGAGAAAGCAATGGCACCCCACTCTGCCGGGGTCCAGCCCCGGTGGATCCAGGGAATTCGAAGCGGGGACGGCGTCGGCGAGGATCAGGAAACAACTGCTTAATTAAACTTTAATTAAGGATATAAAGAGTAATAGAATAAGGATAGCTCAGTGAGTAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTAAGAGAAAGAACGACATGGTGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAGTAGTTTTTATACCTTAAGTTATGCATAGAGGATAATGGGGGAAGGGGTAGAGTCATGAAGCAAGCCAGGCTTTCTTCCTGCAAATTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGGCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAGAAAACTTATTTTTCTCTAAAGGTGATAAGTCAAGCTCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGACACAGCAGGTAAGGGATATGGAAACTTAGCAG TCONS_00015955 TCONS_00015956 . 3' 22470 TCONS_00015955 TCONS_00015956 . 3' 25753 EMBV3_42377 GAATGCTTTGCAGAAATACCCCAACTGTCCTACAGATGTTAGGCAGTGGGCGACATCCTC Gene GeneID:529245|ORC4L:NM_001046301:106_cdna Constitutive 5 NULL GeneID:529245 2 GENE ORC4L MGC133948 origin recognition complex, subunit 4-like (yeast) EMBV3_34013 CGGCAGCCAGCTCGGTTCTCAGGATGTCCTGAGAGGGATGTTTTCACAGAGAAGCCCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40141 TAAACTCTGGACAATCACTGTACTCTTCAGGCGACAAGGAATCTGACAGCCCTGCTTCTG Gene GeneID:784877|PPP1R3A:XM_002707813:145_cdna Constitutive 0 NULL GeneID:784877 4 GENE PPP1R3A NULL protein phosphatase 1, regulatory (inhibitor) subunit 3A EMBV3_35703 CAGGCTGGGCTATATCTTCCAGAAGGACACGCTGCTGCCCTGGTTCAGCGTCCGCAAGAA Gene GeneID:100300241|LOC100300241:XM_002683883:2_cdna Constitutive 0 NULL GeneID:100300241 Un GENE LOC100300241 NULL hypothetical protein LOC100300241 EMBV3_42124 AGAAGACAGGGTGTGAGTGAGACAGCGGGGGCACGGATTGGGTTTGCCAAATGCCTAATT Gene GeneID:509889|FOSL2:XM_002691451:281_cdna Constitutive 1 NULL GeneID:509889 11 GENE FOSL2 NULL FOS-like antigen 2 EMBV3_40811 GGCGGTTAAAGGGGTGCAGGGTTTCTTAAGGGGGATGAAGTGGTTCCAAGATTGACTGCA Gene BVV0102_115952 + 0 NULL GK000018.2:53287712-53302572 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19403 ACAGACCAGCAGCCACCGGGAGAACCCTGGCACCATTATGTACGACCTAGCAGCTTTTTT Gene GeneID:768061|KLHL36:NM_001077118:77_cdna Constitutive 0 NULL GeneID:768061 18 GENE KLHL36 C16orf44 C18H16orf44 MGC128624 kelch-like 36 (Drosophila) EMBV3_23221 GACGTTTTGGTCAAGGTTGCAGGAAAAGGACTGAAGATAGACTGCGAAGGTGGTTCTCCC Gene GeneID:532572|LAMC1:XM_002694207:49_cdna UTR3_Alt 2 NULL GeneID:532572 16 GENE LAMC1 NULL laminin, gamma 1 (formerly LAMB2) EMBV3_23406 CACCTCATACCACATCAGAGGACACACACGGGAGAGAGACCCTACAGTTGCAGTGAATGT Gene GeneID:512364|ZNF84:XM_002694428:135_cdna Constitutive 0 NULL GeneID:512364 17 GENE ZNF84 NULL zinc finger protein 84 EMBV3_02295 GTGGAGTACTTCAAGAGGTTCTGTCTGGATTCTGCAAAGCAGACGCGTCAGAAAGTTGCT Gene GeneID:538655|FAM193B:NM_001046433:43_cdna Constitutive 0 NULL GeneID:538655 7 GENE FAM193B MGC138012 family with sequence similarity 193, member B EMBV3_02233 CATCACAATATAAAACGGGCAGATCCCTCACTTGCCTCTGCTCGGTGCTCTTGAATTGAG Gene GeneID:100336859|LOC100336859:XM_002697613:112_cdna Constitutive 0 NULL GeneID:100336859 23 GENE LOC100336859 NULL RPEL repeat containing 1-like EMBV3_37821 CTTCTGTAACACTTGTATTGCTGGATGTGGGAAAACAGACATGCCTTACTGAGTTAACTC Gene GeneID:504390|HRSP12:NM_001034208:21_cdna Constitutive 0 NULL GeneID:504390 14 GENE HRSP12 MGC127257 heat-responsive protein 12 EMBV3_37503 GAACACCAGGTGGAGTTTTCCTGAATCTCCTGAAAAACACTCCTAGTATCAGTGAGGAAC Gene GeneID:507478|PHAX:NM_001166562:34_cdna UTR3_Alt 2 NULL GeneID:507478 7 GENE PHAX RNUXA phosphorylated adaptor for RNA export EMBV3_06574 GAGGGCGAGGAACTGGTTATTTGGGGGAAGGTTTTCTAGCCCAAAGGCAAAGAGAAACAC Gene BVV0102_340317 + 1 EMBV3_34083 GK000026.2:41271590-41823602 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40354 CACCAGGTGGAGACACACTCTCCGTGACTTAGTTTCCTGAATTGAAGAGGAGGATGATCC Gene BVT0102_113870 + 0 NULL GK000030.2:10499834-10523414 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041725 1 XLOC_025528 NonCoding TCONS_00041725 XLOC_025528 NonCoding NonCoding - 13:278107-283510 - TSS31223 477 1 TCONS_00041725_1 43 4 0.912439837097371 4.75390600289909e-05 3.15988582877441e-05 3.88009317424415e-05 5.22273634443286e-05 0.00108911026986677 0 5.50161560600675e-05 4.95992744211313e-05 0 0 1.99963766434823e-06 0 0 0 0 0 0 0 0.000241721613817909 3.76909104192118e-05 8.87380569010551e-05 0 0.000280477813837366 0 6.53629518025111e-05 4.36957577770071e-05 0.000114454423897206 0 2.54434308953644e-06 0 XR_232468.1 LOC101909256 PREDICTED: Bos taurus uncharacterized LOC101909256 (LOC101909256), 0.0 710 97.17 0.878406708595388 0 noncoding GTTGTAGTGGATTGAGAGGGAGCCTGGAATGGCCTGAAGACAAGTTCCGTTTTTACTCTGGAAGTAATCGACACTTGAACATCACTGTATAGTTCTCAAAAGGTTTTTTTTTTTTTTGGTAATCTAAATGAAGGCAGCAAAAAGGAGTCATTATCGCAGAATAGGATCATCATCCTCTTCAATTCAGGAAACTAAGTCACGCAGACTGTGTCTCCACCTGGTGCCATCAACCCATGGAGGGAACTGCCAGTTCCTGTGATGGCCAGTGGAAGGAGTGACCCCACTGCTGCTTCTACTTGCTACAGATTCAACTGTGACGACTGACTTCCTTCACTACAACTCCTCTGAGCAGAACACACCTAAATATGAAATGAAGTATAAGGAATCGGGAGGCACGCCAAAGCACAGGAAGGGTTTTTAGTGGCTGCAAGACAGCGCTGGAGATGACCCAGCTGCCATGGTGCTCTGGAGACAACT TCONS_00044266 r 3' 14185 TCONS_00044266 r 3' 19587 EMBV3_25697 GTTTGAGGAGCTGCTGCGCCTCAGAGCCAAAATTCTCAGAAAATCGACCGATTAGATGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03609 GTCAACGCTACGGTATCTTTTATCTGGACTGCAGCTCCCTAGTTAAATATTTCTGGCACT Gene BVV0102_034402 - 1 EMBV3_37522 GK000030.2:35755938-36106443 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03860 TCCCTGGCACCTGCTTGCCCTTCTGAGTCTGCCCTTTTTGCACTGAACTTGAGCACTTTA Gene GeneID:514402|ZFYVE26:XM_002690980:251_cdna Constitutive 0 NULL GeneID:514402 10 GENE ZFYVE26 NULL zinc finger, FYVE domain containing 26 EMBV3_22856 CCGCCGACTTCTTGTTCAGCTGCGATGCCTCACACCCAGACACGCTGAGAATATATCAGA Gene GeneID:768019|C10H15orf43:NM_001077078:144_cdna Constitutive 1 NULL GeneID:768019 10 GENE C10H15orf43 C15orf43 MGC137479 chromosome 15 open reading frame 43 ortholog EMBV3_17690 CCCGCTGTCTTGTGACCACTCTCTCCACTTACCTCTGTCCCACATATGTAGATCCTTTTT Gene GeneID:787132|LOC787132:XM_002695977:327_cdna Constitutive 0 NULL GeneID:787132 19 GENE LOC787132 NULL similar to keratin associated protein 4-7 EMBV3_40098 CTTCTCCCAGTCTGGAAAACAGTTCACCTCAACACTGCTTCTACCTCCAACCAACTACTT Gene BVV0101_002936 + 1 EMBV3_21468 GK000020.2:34852642-35018907 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34898 CCAGAAGTCAAAAGCCCAAGCTAGTCATGAGGTGGAAAGTGTGCAATCCAGAAGTCCAGC Gene BVV0102_063798 + 0 NULL GK000011.2:68715048-68745031 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025277 TCONS_00025282 TCONS_00025284 TCONS_00025283 TCONS_00025280 TCONS_00025281 1 XLOC_014715 Coding TCONS_00025284 XLOC_014715 Coding Coding CAPN14 11:68678818-68717123 j TSS18390 4116 1 TCONS_00025284_3 667 0.0153061224489796 22 0.89311821219716 0.000857166463633195 0.000631983217668829 2.56721233808576e-12 0.000886608076694326 0.000564234049038121 0.000313233775342489 0.000520951627876453 0.00151120849019127 0.00142218774448371 2.70271819961933e-09 3.31885923772703e-06 0 5.00642073560717e-09 0.000171030559012463 1.40418914088061e-05 8.68110461456042e-57 1.2252758327833e-07 1.07655145615695e-09 0.00157284060600491 0.00106950788197569 0.000198607828469334 0.000322651083316531 4.56362298954236e-05 0.000149340779021948 3.13114608967353e-07 0.00115403641385543 0.000169434124568125 3.72508581945882e-05 4.00600926781255e-05 1.20264990048244e-05 NM_001192425.1 CAPN14 Bos taurus calpain 14 (CAPN14), mRNA. 0.0 3672 100.00 0.494412050534499 NM_001145122.1 CAPN14 Homo sapiens calpain 14 (CAPN14), mRNA. 0.0 2558 81.19 0.640184645286686 TCONS_00025284_3 sp|A8MX76|CAN14_HUMAN CAN14_HUMAN Calpain-14; 0.0 1083 80.48 0.989505247376312 5 coding 1 0 0 1 -1.04025956466055 0.00235002793523314 0.00907805356461369 0.869687352681148 GCAGGCAGATACTGGAAGCTGGGGTGTAAGGACTCAATGGGCGACTTTTCGCAGCTCCCCAGACAGGACTACGAGGCCCTGAAGGAAAGGTGCCTGAGGGACGGCTGTCTCTTTGAGGACAAGAGCTTCCCGGCCGCCCTGAGCTCCATCGGCAGTGGGCCCCTGCTGCGGAAGCTGCCGAGCCGCCTGCAGTGGAGGCGGCCTCCGGAGCTGCACAGCAACCCCCTTTTCTACTCTGCCAAGGCCAAACGGCTGGATCTGTGCCAGGGATTGGTAGGTGACTGCTGGTTCTTGGCGGCTTTGCAAGCTCTGAGTTTGCACCAGGACATTCTGAGTCGCGTTGTTCCCCTAAATCAGAGTTTCACGAAGAAGTATGCTGGCATCTTCCAGTTCTGGTTCTGGCACTTTGGAAAGTGGGTTCCGATTGTGGTAGATGACCGACTACCTGTGAATGAAGCTGGCCAGCTGGTCTTTGTCTCTTCTACCTACAAGAACTTGTTCTGGGGAGCTCTTCTGGAAAAGGCCTATGCTAAGCTCTCTGGCTCCTATGAAGACTTGCAGCGTGGACAGGTGTCTGAAGCCCTTGTGGACTTCACTGGAGGGGTGACAATGACCATCAAGCTGTCAGAAGCCCCTGACAGCCTCTGGGATGTCCTAACCCGAGCCATGTACAGCAGAACCCTGATTGGCTGCCAGACCCACTGTGGGGAGCGGGTGCTGGAGAATGGGTTGGTGGACGGCCATGCCTATACACTCACAGGCCTCAGGAAGGTGACCACCAGACATGGACCTGAGTATCTCGTCAGGCTCCGGAACCCCTGGGGGAAGATAGAGTGGAAAGGAGACTGGAGTGACAGCTCGAGTATGTGGGACCTACTGAGCCCCAAGGAGAAGATTCTGCTGCTGAGAAAAGATGATGATGGAGAATTCTGGATGTCACTGCAGGACTTTAAAGCACATTTCATGCTTCTGGTCATCTGTAAACTGAGCCCAGGCCTGCTGACTCAGGAGGTGGGCCAGAAGTGGTCGTACACCATGCTGGAGGGGAGATGGGAGAATGGGAGGACTGCTGGTGGCCAGATGAAGTCGCCCCAAGACACATTTTGGAAGAACCCACAGTTCCTGCTGTCAGTCTGGAGGCCCCAGGAGGGCAAGAGGTCCCAGTTGCTCTGCAGCGTGCTGGTATCCCTGCTCCAGAAGCCCAGACACAGGCACCGCAACTGGAAGCCTCACCTCGCCATTGGCTTCTACCTCTTCAGGGTGAACCAGATCTTTGATGCCCAGAAGAAACTGCCGTCTGAGTTCTTCTGGAAAAATGCTTCCCTGAGTTGCCGTGCGACGTTTCTCACAGAGAAGGAAGTGAGCCGGGAACTGTGGCTGGAGCCAGGGACATACGTGATTGTGCCCTGCACATCTGAGGCCTGCCAGGAGTCTGAGTTCGTCCTCAGAGTCTTCTCCAGGAAGCACATCTTTTATGAAATCGGCAGCAATTCCAGAGTCATCTTCTCTAAGGAAATTGTAGACCAAAGTGAAGGGAAGGATGAATTCTTCACCAAACTCTTTGAAAAGTATCCAGAAATAAACGCAATCCAACTGCAGAATATCCTGAACCACATGCCCTGGTCAGGTCTAGGAAGCAAACAGCCTCTCTTCAGCCTTGAGGCCTGTCAGGGAATCCTGGCCCTGCTGGATCTTAACGCATCCGGCACTGTGAGTATCCAGGAATTCAGGGACCTGTGGAAGCAGCTGATGTTCTATCAGGAGGTTTTCCACAAGCAAGACACTAACCGGTCAGGATCCCTGAATTGGGCCCAACTGCGGGCTGCCATGAGGGAGGCAGGAATCATGCTCAGTGATGACGTCTGCCAGCTGATGCTTATCCGCTACGGCGGCCCCGACCTCCAGATGAACTTCGTCAGGTTTGTCCGCTTGATGCTGCGTGTGGAGAACATGGAGGATGTCTTCCAAAACTTGACCCAAGATGGCAAAGGGATATACCTCCAGAAGCCAGAGTGGCTAATGATGGCTCTGTACTGCTGAGAAGGCTGGAAGCTCACTGATCCTCACTGAGGACTCTGCATATGGACCAAGGGTGGCCTTTAGGTGAGACCAACCCACGTTCAACCCACCTACAATTCTTCAGGACTGTGTCTCCAGCCATCACCTTCTCATCTGGGAGGATGGGCAGCATACAAAAAGAGAAGTGAGGGAGTAAAGATTGCCTTGGGGTTGTCAAGACCAGCTCTTCTCCACAGTGACCACAACCACAAGCAGAGACGTGGCCTGAGTTGACTCTGGGTTGGTGTGCTTATCTTTGTATGATACTGCCTCCATGGGTGTCCAACTTAAATGACCTTAGACATGCTATGTCATCATATTTGGGGTAAGAGTCTAGGTTTCAAGATCTGAAGAGGGAATGATATGTTTATAGACATATGTAAATTGGCATCTATAAACTGGTAGCAGCATAGGCTAAGTTTTAACTATCTGGGGGTGGAGTAGACCCATATTGCACTTTCAAGAGTGCAGAAATAATAGAATTGGCAGGGTTTGGGGGGGATGGGCTGGCTCTGGCCTCTGAGGTCACTGAGTGATCTTCTGCTAACAATATCTCCAGATAGTTGGATTTGGTGTGTACCAGTAGATTTGATGGGCTGCCGTCTCGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGTAGATTTGAAACACCCTGCTTCTTAAAGGGCTTCCTGCATATGATGGGTGTCAGTCTGTTTACCTGACCTATGGGCTATCAGGTCTACTTCAAAGAAAAATAACAAATCCATGCTACATCATACAGTTAATCAGTAAATGGTCAGTATATCTTTTTTTTTTTTTTTTTAAACTATGTTCATACCTCATTTTCCTGGGATCCCTACCAACCCAGAACCCAGATGGAAAACCAGAGCACTGGCCATTTTCCAAGGCCATACATTCTATTTATAAGTTAGAAACCTACAGCCATTTGTTAAAATTCTATTTATTATTCATTTACAAACTGTTCTAACTAATGTGACTGCCTGGTTTCTGGGCCCATAGCAGACTAGAGGAGGAGGCTGAAAGCGGGGGATCAAAGGGTGTCTTTTGGCAGAACTAAAGGAAATTTGACAGCCTGGTAGATGGGCAGTATGGGAGAAGGAGGGAGCACTTTCAAAGCATGGCTCAGGGAGTAGAAAAGCATTTTATTTAGAAAAACCTTTATTTATTCCAAATGATGAAAAATACAACGGTTTGTCAGAAAGTGCCATGTATACTACTACTTGAGGTATTACTGATTTTATAAATACTGATCCTGTATTTATATTCTTTTAAAGAGTTTTATGTCTGTTTATCAATATCTCTATCTTTGGATTCTGCCATTGTAAATATTTGGTTTAATTAAATTGTTATTGCTTTGCACCATGAAGGCAATTTTGCAGATTTTGGGGGAAGGTTTCATGACATGTGGATTGCAGAGTGATGGTTTTGCTGGTGTGGATGGAATCAATGCTGAAATGAATTCTGATAGAGTCCTTCTTTCTGCTCCTTGGTGGTGGTCAGAGATGGCCTCCTGTCACTCATGTATAACCTCCACTCCCCTGAATTTATATATCACTGTGTGCTGTGGTGACTCACAGATGCCCTGGGCCCTGCTGACCTCCACCCCCGATGATTCCCTCTGTGCCCCCCAAAGCTGAGTACTGGAAATGAGGGGCAAAGCCATGTTCCTTCCCACATAACCCCCTCCCATCTGCTGTTACCCAGGGCGTGAGAGCAAGTAAAGCTCCAGGGCAGGATAGACTATTGAAGGTCAGGATGAAGTCACGCTGAAGATCTGAGTGCTGGACGTCAGTGATTTCCAGAAGTCAAAAGCCCAAGCTAGTCATGAGGTGGAAAGTGTGCAATCCAGAAGTCCAGCGACGAAGGAGCAAGGAGCCAGTCCTGAGGTGTTAGGTGAGGGCAGGAGTCCAAAGGGTTGGATTGTCTAGAAGACCAGCCCAAGTAGGCAGAGCATGCCAAGGGAGCCTGTCCTAAGCTTTCATATCTCAGGGGGAAAAAAGGATTCTTATTGATAAAAGAAAAGGGACTAAAGTA EMBV3_37952 GACGCTTAACCATTTCAGGGCTGGTTCCTCTGTTCATATCCAATTCTGGTGCTTAGGAAC Gene GeneID:510781|JOSD1:NM_001014898:43_cdna Constitutive 0 NULL GeneID:510781 5 GENE JOSD1 KIAA0063 Josephin domain containing 1 EMBV3_27727 TAAGGAGCGGTAGCTGTGCAGCCGCCATTTCTTCCGCCTCCGGTCTCTGGATCTTTCGTA Gene GeneID:327718|COX7C:NM_175831:2_cdna Constitutive 0 NULL GeneID:327718 7 GENE COX7C NULL cytochrome c oxidase subunit VIIc EMBV3_19591 AGGATTCAAATCATGTGCCAGTTCCTACTGATTGCTAGTGGCTTCCAGAGACACTGTTGC Gene BVT0102_011071 + 0 NULL GK000026.2:14463808-14667437 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15020 CCTGCTTCCAAAATGATGTGCTCTATGGAACAGGGACTTTGGCCCTGGGGAAGAGACTCT Gene GeneID:540619|RHOJ:NM_001083498:199_cdna UTR3_Alt 2 NULL GeneID:540619 10 GENE RHOJ MGC143367 ras homolog gene family, member J EMBV3_22015 TTGCAATTACCAGGGTTTGGGGAGAGGGGTGAGTTGTTGCTTAGTGGGTAGAGCTTCAAT Gene GeneID:338070|CHRNA1:NM_176664:196_cdna UTR3_Alt 2 NULL GeneID:338070 2 GENE CHRNA1 NULL cholinergic receptor, nicotinic, alpha 1 (muscle) EMBV3_17544 GGCCATTGCTTACGGCAGGAAGCTGGGCGGGGCAGAAATACTGAAGAAAATTCCAGGCCG Variant GeneID:513453|TALDO1:NM_001035283:272_cdna 278^331 5 EMBV3_03701 GeneID:513453 29 GENE TALDO1 MGC133714 transaldolase 1 EMBV3_33420 TCTGGCCCCCGCGAAGGAGCACGGGGCTTGGAAGAGGTTGCTGCCTTCTTCGTGGCCGAC Variant GeneID:506961|ADC:NM_001038510:70_cdna 391^659 2 EMBV3_35678 GeneID:506961 2 GENE ADC MGC134604 arginine decarboxylase EMBV3_08867 GGATCAGTGAGGAGAAGGTCTGGGGAGCACTTAGCAAGATAGAGGTATTTCCTGGGGCAC Gene GeneID:787822|LOC787822:NM_001101301:115_cdna Constitutive 0 NULL GeneID:787822 X GENE LOC787822 NULL hypothetical protein LOC787822 EMBV3_16028 GGGACTCTCAGACCCACAAGGGAATGGCAACTGGCAATGGATTGATCAGACACCTTACAA Gene GeneID:514979|CLEC6A:NM_001034479:37_cdna Constitutive 0 NULL GeneID:514979 5 GENE CLEC6A NULL C-type lectin domain family 6, member A EMBV3_26152 TTGAGAACTGGAGGAACCACATACAACACTAAAAAACTTCCCCTACCCTGACCCACCCCC Gene GeneID:281945|NR2F2:NM_174402:8_cdna UTR3_Alt 2 NULL GeneID:281945 21 GENE NR2F2 MGC157288 TFCOUP2 nuclear receptor subfamily 2, group F, member 2 EMBV3_05037 ATCTGGATGGCATTGGCATGGGCCGGCCTGATCCTTGGGGGCTTTGCCTCTGGGCAAAAG Variant GeneID:510356|TNK1:XM_002695801:372_cdna 263^333 1 EMBV3_28557 GeneID:510356 19 GENE TNK1 NULL tyrosine kinase, non-receptor, 1 EMBV3_41903 ACTAGAGGACCAGGTGGGTGCACTGGGTCAGCACCGTGGGTCTGGAGTGAAGGAAGCACA Gene BVV0102_186938 + 0 NULL GK000014.2:1804839-1806080 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051035 TCONS_00052564 TCONS_00051031 TCONS_00051034 TCONS_00052567 TCONS_00051029 TCONS_00051033 TCONS_00052563 TCONS_00052566 TCONS_00052560 TCONS_00052562 TCONS_00051037 TCONS_00051032 TCONS_00052561 TCONS_00052565 TCONS_00051028 2 XLOC_031075 XLOC_031503 Coding TCONS_00051035 XLOC_031075 Coding Coding DGAT1 14:1795386-1806011 j TSS38145 2795 1 TCONS_00051035_2 265 14 0.738234186746988 1.12748961942408e-207 1.08016577417965e-15 2.85947909666519e-40 8.69629746154465e-71 5.36642689749534e-30 4.12328192674432e-15 1.9460675858022e-14 2.6811134077651e-12 6.39636440886399e-47 1.42318107064671e-07 2.75924789308445e-35 9.85741885308935e-49 2.75445717352871e-50 9.56439267673511e-16 2.63856967803496e-46 0.000200830541381293 0.00373528008909877 2.84548895712676e-20 1.73060065418439e-35 2.39233615722616e-09 3.40327698246147e-27 4.33268884713176e-74 2.09998011571014e-67 7.05079611628183e-11 3.37730530156531e-85 2.00862142590422e-29 3.4452104809781e-102 5.81589293627869e-39 5.16998219932643e-21 5.8446675395442e-87 NM_174693.2 DGAT1 Bos taurus diacylglycerol O-acyltransferase 1 (DGAT1), mRNA. 0.0 1377 100.00 0.27262969588551 NM_012079.5 DGAT1 Homo sapiens diacylglycerol O-acyltransferase 1 (DGAT1), mRNA. 0.0 762 87.24 0.221109123434705 TCONS_00051035_2 sp|Q9Z2A7|DGAT1_MOUSE DGAT1_MOUSE Diacylglycerol O-acyltransferase 1; 8e-164 468 77.24 0.981132075471698 1 coding 1 0 1 1 -0.0932216651131542 0.607824900536648 0.0102481234452595 0.823711570595085 TGCCAGCCCGGCGGGCTACGACTTGGCCGCGGCGGGGTGCGAACTAAGGCCATGGGCGACCGCGGCGGCGCGGGCGGCTCCCGGCGCCGGAGGACGGGGTCGCGGCCTTCGATCCAGGGCGGCAGTGGGCCCGCGGCAGCGGAAGAGGAGGTGCGGGATGTGGGCGCCGGAGGGGACGCGCCGGTCCGGGACACAGACAAGGACGGAGACGTAGACGTGGGCAGCGGCCACTGGGACCTGAGATCTTAAGCAACGCACGGTTATTTCTAGAGAACCTCATCAAGTATGGCATCCTGGTGGACCCCATCCAGGTGGTGTCTCTGTTCCTGAAGGACCCCTACAGCTGGCCAGCTCTGTGCCTGGTCATTGTGGCCAATATCTTTGCCGTGGCTGCGTTCCAGGTGGAGAAGCGCCTGGCCGTGGGAGCTCTGACGGAGCAGGCGGGGCTGCTGCTGCACGGGGTCAACCTGGCCACCATTCTCTGCTTCCCAGCGGCCGTGGCCTTTCTCCTCGAGTCTATCACTCCAGTGGGCTCCGTGCTGGCCCTGATGGTCTACACCATCCTCTTCCTCAAGCTGTTCTCCTACCGGGACGTCAACCTCTGGTGCCGAGAGCGCAGGGCTGGGGCCAAGGCCAAGGCTGCTTTGGCAGGTAAGGCGGCCAACGGGGGAGCTGCCCAGCGCACCGTGAGCTACCCCGACAACCTGACCTACCGCGATCTCTACTACTTCCTCTTCGCCCCCACCCTGTGCTACGAGCTCAACTTCCCCCGCTCCCCCCGCATCCGAAAGCGCTTCCTGCTGCGGCGACTCCTGGAGATGCTGTTCCTCACCCAGCTCCAGGTGGGGCTGATCCAGCAGGTCCCCAACCACCTCATCTGGCTCATCTTCTTCTACTGGCTCTTCCACTCCTGCCTGAACGCCGTGGCTGAGCTCATGCAGTTTGGAGACCGCGAGTTCTACCGGGACTGGTGGAACTCCGAGTCCATCACCTACTTCTGGCAGAACTGGAACATCCCTGTTCACAAGTGGTGCATCAGACACTTCTACAAGCCCATGCTCCGGCGGGGCAGCAGCAAGTGGGCAGCCAGGACGGCAGTGTTTCTGGCCTCCGCCTTCTTCCACGAGTACCTGGTGAGCATCCCCCTGCGCATGTTCCGCCTCTGGGCCTTCACCGGCATGATGGCGCAGATCCCGCTGGCCTGGATAGTGGGCCGCTTCTTCCGCGGCAACTACGGCAACGCGGCCGTGTGGCTGTCACTCATCATCGGGCAGCCGGTGGCCGTCCTGATGTACGTCCACGACTACTACGTGCTCAACCGTGAGGCGCCGGCAGCCGGCACCTGAGCGCCTCCAGGCTGGCCCCCTCGTGGGTGTTGGACTGCTTTGCCGCGCTGCCTGCGGCTGGACTAGAGCCTGCCCCAACCTGGGTGCAGCAGGAGGAGGCCTGGCTGGTGGAAGCTGCCTCCTGGCCTCCACCAGGCCTCTGCCTGAAGGGCTTCCTCCTGCCAGGGGAGAGCAGGCCCGACGCAGTTCTGGCCCCTGGGAGGTGCCCATGCTCTGGAAACCCTACAGATCTCGCCCAAGGGTCTGAATGTGTCAATAAAGTGCTGTGCACAGTGAGCTCCCTCAGCCTCCAGGGCACAGGGCTGGCAGGAGGGGGCGGCCCTCCCACGTGGGGCCATGCTGTGGGAAGGAGGCCCCAGCGCCTGGAGAGGAGCTGGGGCTGTGGTGACCCTCCCTGCCTCACAGGGCTCTGTGGTCAGACGTCTTGCCCTGCAAGGTGGAGACTCCATGCTCCAAGGCCCCCTGTGCCTGAGGTCTGCACACAAGTGGATTCAACTTGGGTCAGGCCAGAGGCTAAGGTGTGGAAGAGGGTTGAGAATCAGGCTGACTTGAACGGCAGCAAAGACTCCAAGGCAAGGCTGCAGAGGTCTCAGAGGCTATGCGCACAGTCCCCTGCTGGGGTGCTCACCTGGGCTGGGCTCTGGGCTGCTTGGACAAAGCAGGTGGCCTGGCTCAGCCCTCACCGAGGGCCTCCCTTGGGGGCAGAGGTTGGCCTGATGCCAGGGGCTCCCCGTTTTTCCAGGCCCTCAGCAGGTAGTTGGGTGTGGCCCTCAGGATACCTTGGTCCCAGAGCTTGCCACTCAAAAAGCTTGGCAGTGAGGCAAGGGCAACCCCGGGCTGTTCCCCCCTCTACTGGCTCTGCCGCCTGGGTTGGAAACCCTGAGGCTGTGCCAGGCAGGTGTACCCTGACAGCCAGCCATGGCCCAGTAAGATGGGTGCCCGAGGTGGTACCTGGGCAGCGGACCCAGCTGTGCTGCCCCCGCCCCAACCAGAAGCCGCTCTAGCCCATGGTGGTCGTCTGGGCGAGACAGGCTGGTTGGCTAGGCACTGTTTGGTCTACAGCAGGTGTAGGCAGCGTCTCCCTGACCCCTGCCTCCTAGGAAGCCACCACCCTGGGCCCTACTCATCAGCAAGGACAGCGAGCAGGGCTGAGCTGGGGGTGCGTGGGCTGCTACGGCCCGCCACCTCCATCACATGCACCTCTGCACCCCCTGCTGCCTGACTCAGGAGTGGGGGGGGGGGTCCTGTGCTTCCTTCACTCCAGACCCACGGTGCTGACCCAGTGCACCCACCTGGTCCTCTAGTGCGGACCTGGCCACAGGGCTCCTGTGGGCCCACGCTGATCCCGCCCTGGTCCCTTCATAAAGAACTCTTGAGCACATGCAGCCCAGGGGAGCCAGGAGGCTCCAGTGTGCTGTGTCCATCTGCCTCCCTCCAGCCCCTTCCGAG EMBV3_12362 CCCAAAGCCTTCAACATCTTCGATCGGGATTTGAAGGAGGAGGTTGGAAGTCGGATTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36084 CGACATCTACGACAAGGTGTCAGGCGAGATACAGAAGAAGGGCTATGACTGCGAGTGCCT Gene GeneID:618691|PHPT1:NM_001076516:50_cdna Constitutive 1 NULL GeneID:618691 11 GENE PHPT1 MGC133682 PHP14 phosphohistidine phosphatase 1 EMBV3_16833 CTCCCCTTCCCCTACTCTCCTCCCTCCTTCCCTTTGGGATCATGCTACTATGACGGAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34810 CCTTGCTGGGACATATGGAGATAGGTGGGTACACAGTCATCCTCTTACATGATTGGAGGC Gene BVV0102_102027 + 0 NULL GK000008.2:103811066-103820183 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40604 TACAGAAGTTACCAATTTGTGCACAGTGTGGGTGCAATATGTGACTTCTGCGAAGCTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02216 ACGTGGCAGTTCAGTCCGTCAGTCTCCGCACAGAAGGGTTACCAGTTGTAAGCTACGCTT Gene BVT0102_113881 + 0 NULL GK000014.2:26304606-26348323 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051564 TCONS_00051567 TCONS_00051565 TCONS_00051562 TCONS_00051561 TCONS_00051566 TCONS_00051563 1 XLOC_031229 Coding TCONS_00051564 XLOC_031229 Coding Coding UBXN2B 14:26271676-26308112 = TSS38426 5028 1 TCONS_00051564_2 331 0.427804295942721 8 0.862220392479758 0.00319057286857497 0.00235455763994211 0.00340407988825733 0.00206530021471627 0.00214608269146298 0.000622992751530418 0.00154270904769875 0.00164535831517136 0.00203578937449452 0.000152168180647795 0.000243445535467889 0.000298795472553217 0.000414633548002028 0.000623068178161887 0.000936307058584384 0.00217023223362543 0.0011751617561568 0.00433696252938073 0.00294323197475827 0.00503576012014618 0.00178439475085647 0.00113897086544493 0.000579217059844653 0.00153070081496191 0.00520795441823445 0.00508359874551354 0.0035381139337518 0.000311262342829189 0.000580038253906735 0.000384028232932974 NM_001206828.1 UBXN2B Bos taurus UBX domain protein 2B (UBXN2B), mRNA. 0.0 9063 99.98 0.999801113762928 NM_001077619.1 UBXN2B Homo sapiens UBX domain protein 2B (UBXN2B), mRNA. 0.0 1761 84.42 0.319610182975338 TCONS_00051564_2 sp|Q14CS0|UBX2B_HUMAN UBX2B_HUMAN UBX domain-containing protein 2B; 0.0 619 90.33 0.996978851963746 2 coding 0 0 0 0 -0.35858722152269 0.166453029890085 -0.0265240089580121 0.578638017463741 ATGGCGGAGGGCGGCGGCGGAGAGGCGGGCGAGGAGGAGCCGAGGGCTGCGGGGCCGCGGCCCCCGAGCGCGCGGGACTTGCAGTTGGCCTTGGCAGAATTATATGAAGATGAAGTGAAATGCAAAGCTTCCAAATCTGATAGACCTAAAGCTACAGCCTTTAAAAGCCCACAGACAGCACCTCAAAGGTTCTATTCAAGTGAGCATGAATGCAGTGGATTACATATAGTTCAACCTTCAACTGGGAAAATTGTGAATGAACTTTTCAGAGAGGCGAGACAGCATGGAGCCGTCCCTCTGAATGAAGCCACAAGAGCCTCGGGTGATGACAAATCTAAGTCTTTTACAGGTGGAGGATACAGATTGGGTAATTCCTTTTGTAAGCAGTCTGAATACATCTATGGAGAAAATCAGTTGCAAGATGTTCAAATTTTGCTTAAACTGTGGAGCAACGGTTTCAGCTTGGATGATGGAGAATTGAGACCTTACAGTGACCCAACAAATGCCCAGTTTCTGGAGTCTGTTAAGAGAGGAGAGATTCCCCTGGAGCTTCAGCGACTGGTTCATGGAGGACACTTGAATTTGGACATGGAGGACCATCAGGATCAAGAATATGTAAAGCCTAGGTTGAGGTTCAAGGCTTTTAGTGGAGAAGGACAGAAACTTGGAAGCCTCACACCTGAAATAGTCAGTACACCTTCCTCCCCAGAAGAGGAGGAGAAGTCACTGTTCAATGCAGTGGTTCTTATTGATGATTCCATGCCAACCACCAAAATCCAGATCAGATTAGCAGACGGGAGCCGTTTGATACAGAGATTCAACAGTACTCACAGGATCCTGGATGTCCGGGACTTTATCGTTCAGTCTCGTCCTGAATTTGCAACTCTTGACTTTATTCTCGTGACTTCGTTTCCAAACAAAGTGCTAACAGATGAAAGCCTGACACTACAAGAAGCAGATATTCTTAACACTGTGATACTGCAGCAGCTAAAATGATACTGTCCTACCTATGCAGTAGCATGTAGGAATGGTAATGTGCCATACTAGTGAGGAAAATACTTAAGAGCGTAAAAAATTATTTTTATTATTTATACAGATAAATTTTGGTTTAATTCTTCAATCTTCCAGCTTTAGGATAGATAAATTTGGACTAGGAGTAGATCTTAAGGTAACATATGTTCGAAGTTTTAGCCAAAAGGGCTGGCTTCCATTGATAGCTTTTAAATATTCAGGCAAACCAATTTGATACATGCTCAGAGTTAATGTAACAGCACTTGTTTGCAGAGAAAATGAACAAAATGCCATTTTTGACAAATGCATTTGGTAAAATTTGCACTAAAGTTTCTTGATGCTGCATTGATCAGCAGCCATTAAGAAATCTTCTGATCAAACACCTTGAAATTTTTTCTGTAATGTATACTGGGAACTATGTATGTATTCTGATATTTAAATACTTGGATTGTATGATAGTTATTTCTCCTATTAAGATAAATAATTCCTTTCTACTTGCTGATTTAGCTGTTTTACTCATGTCAGAAAATACAGTTTCGCCTTGTGTTTTATGACCTTCATAAACCAGAAACAAAGACATAAAGGTCAGCAGTTCTTGAGGAGGAGTGTGTTCAACTGCACTTTAAAGGAGAGTAACTACAATCCCTGGCTGCGCCCGTCTTGATCACCCCCATTTATTCATTCAGCAAGTGTTTCTGGGGGACCCACCATGTATACTAAACACTGTTGTAAGTGTTAAACCCAGAGTGTATTGTACTGCAAAACCAAATGAGGGCAGAAACGAAAGAATGAATTCCATCAAAGAGACAGAACCTGAAGAGTCACCAGCGTAAATGTCTGCATTTCTGCTGGAGCCAGATGTTCGCTGAGTGAGGGAAGGTGCAGCAGGAGTGAGAGAACAGCGTATTCTTCTTCCCAACACCATTTCATCTCTGGTCACCTCTCCTGGCTTGTCTTTTATTGCTGCTGTAACAAATCACTACAGACATGGTGGCTTACAATAGCCTAGGTTTCTTGTACTTCTCTGGGTCTCACGTGGGCCTCACTGGGCTACAGTCAGGTGTCAGCAGGGCACCGTTCTCTTGGGAGGTCTCGGGGAGATGTGTGTCCTTGCCTTACCAGCTTCAAGCGGCCACCTGCATGCCTGGGCCTGTGGCCCCCTCTCTTCGTCTCCAAAACTAGCAACGCTGTATCCCTCTGACTCCTCTGTCATCACATCTCTTGGAAAACAGCCGGGAAAGATTCTCTGTTTATTGGGTCTACCAGGTGATCCTGGATGCTCTCCCCACATAAGGTCCATAGTAACTGGATCCTTGAGGTCCCTTTGATTGTGAAAGGTGATGGATCACAGGTTCCTTCCAGTGCACCAGGGCTCATCTCTTGCCTCTTCAGCTGGCATCCATCCCTTCACTATGGCCAAGCCCCTCATCTTGGCTTCTATCCTTACGGCCTTTGCCTCCACCTTTGATTCTCCTTTCTTCTAAGGGCCCTGGCAATTACATTTGCTTCACTTGGATACTCTAGGATAATCTCCTCGCCTCAGATGTGTGACTTAACCCCATCTGCAGAATCTCTTCTACCACATAGACTGACAAATTCATTGGCTTGGGGATTAGAACATGAGCCTTTTGGGAGGCCTTTCTGTCTACTGCAGTCCACTCCTGTCCGGAAGATCCACATTCCACCCTGAAAGGTGCTCAAGAGCTTCAACCCACTGCAGCACCAGCTTAAAAGTGCAAAGTTTTACCTGGATCTCATGAACTCAGATGTCCTGAATCTCATTTAAATCATGTAAACCAAGTATGAGTGAACATCTGGTATGAGTGGTTCCTGGGACACAATTTCTCTCCATCTGTGAACCTAGAGAAACCAGTTATATAATGGCAACAGGCATAAAATAACCGTTCTAGACATTCCTGTTTTAAAAAGAAAATGGGGTGGAAACGGGAGCTGCCAGTGCCAAGCACTTTGTAAGTTCAGCCAGACACACTCGGCTTGAAGGCCTGGAAACAGCCTTCTGTGACTCAGCAGTCTTTGTAGGTGTGTGACTTTCTCTCAGAGACCTCTTTTTTTTTTTTTTCCCTTTTTCATGAAAGGTAGCAGGTATTTGCAGCCAAGTAGTTCTATCAGCTTGTAATGTCTGTAATTGTAGGAGGCTGAGCCATCTTTTTTCATTTCATGTCTCTGTCCCCTTTAAGAAAGCAATATCTGCTAATGTAACATTCTCGAGACATGTGTGGATCTTCTGTGTATGTTACAGAGATTCACTCCATTAAACCACAGGCTCCTTCCAGAGCTTTCCTAGGTAACCCAGCTGTTTCCGGCTGTCTGTGACCTTCTCTGTCTTTCTCAGGTATAAGCAGCAGGTCGTAGGCCACAGTCTCATCTCTTCCCCTGGAGCAGGCCTCAGTTCAGTTCAGTCGCTCAGTGGTGTCTGACTCTTTGCGACCCCATGAATCGCAGCACGCCAGGTCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCATGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTTGTTCTCTTCTCCTCCCATCCCCAATGCGTCCCAGCATTAGGGTCTTTTCCGGTGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTCAGCTGCCTAAAAGTAAATCTTTAAATTTTAATGTCTTTGCTATTCGCTAAGGATTTCCAGGTCATCAAGTCCTGTTTCCTTTTTTTTTTTTTAACAGTCCTTCCCTCAACTTATCTATTTTTTCTCACATTAGACTATAATCAGTAAGAAGAAAGCAGGCTGCCCCTGCCACACAACTTCGAAATCTCTTCAGCTGAGAGTCTTGAGTTTCTCTCATGCTTCTTTCTTTCCACACAGCTGCAGTCACAATGCTAAGCTTCCTGCCACTGATTCACTGGAATCTCTCTTCCTTCACTTTTCCCGCAGCACAGGCCTCATTTCCTCCTGAACTTTTTAAAAGGTCCTTTTTTCCAGTAACCCTGTCCTCACAGCCACATAGCTGTTCTCTGACACACCCCTTACCTCCTTGGAGCCCTCGCTGCCTTTCCCAGCCATGGCCCTGCTCCTTTGGCTCTCTGCCACACTCCTTTGAATATTTCCACCCTCTTCCACTGCCCAGTTCCAAGGCCACTCCTGCATTTCTGTGTCTTTGTTAACAGCAGCACCCACTTCTTGGTCTCTGGAAAACTCCACTCTGCCAGTTGACCTGAATGTGCCAGTAGGAGCTTTGGGTGTCACGTTTCACTGGGGGCTTCACTTCAAGGAGCTGAATTTGCCTATGTGAGGCGGACAGTGGGAGGGCTCCCAGACCCACTCACCTGCCAGTGTTGGCCTCACCACCGCAGAGAAAACTCGTGCTCGGTGTCAGAAGCAGCGTATTCCTAAGACTTCTCAGAATGGGAAGCTCTGTTCCTTCCCACTGGTTGGAAACAACCTGGAGAATGCAGACGTGACAGTTCAGTCCGTCAGTCTCCGCACAGAAGGGTTACCAGTTGTAAGCTACGCTTCCAAGGAGCAGAGTCATATCTGTATGGAAATAATCTCCTGCAACAGGTGAACATTTTAAATAAGGGCATTGCCCTGTTTTAGATTAACAAAATGGAGAGAACCTGTAAAATTATTTGAAGTTTTATTCTTGTAGTTTCTTTTTAGTCAGGTGGAGTGCCTGAGGATGCACATACATGAATGACTGCCGTTCTTGTATATAATAGTTTTCCAAAATAGATTCTTGTTGGGAGGGAGAATTAAACAGCCAGAGGGATGAACATTACTTTTACAAGTGTTCTACAAAGTGTTTGCTTCCTTCAGAGTTCTGAATTCTTTTTACTATTGCAGTCACTGTAACTTTTTAAAATTTATAATTCCATTAGAAGAGATTGTTACAATAAACAACCATGTGTGACATCAGTTTTGCATGATGTGTGTAATCAAGAAAGTTTTAAGTGTGTGCTTACCAATAAAGAATGTTTTCACTGGA EMBV3_41949 ATCCACACGCAGAAGAATGTGCTGATTGAAGTGAACCCCCAGACTCGAATTCCCAGAACC Gene GeneID:515362|EMG1:XM_002687861:96_cdna Constitutive 6 NULL GeneID:515362 5 GENE EMG1 MGC138092 EMG1 nucleolar protein homolog (S. cerevisiae) EMBV3_26365 CTCCCCAGGGCATTTGGCGTCGGGTGGGAGGGGGAAAACGCATCTTGTTAATTATTTTTA Gene GeneID:529621|PRR12:XM_002695118:608_cdna Constitutive 0 NULL GeneID:529621 18 GENE PRR12 NULL proline rich 12 EMBV3_05603 GGTATATTTGTAAAGCGCCTTAATAGATCCCTTGTGAAGGCACTATATACCACAGTTTAC Gene BVT0102_254960 + 0 NULL GK000009.2:87999504-88008819 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236201 1 XLOC_144400 NonCoding TCONS_00236201 XLOC_144400 NonCoding NonCoding LOC100847942 9:87987432-88008593 = TSS176856 1628 2 TCONS_00236201_2 50 3 0.92320415879017 0.00134552715881961 0.00153897952618944 0.000433898957836561 0.000418267380936901 0.000188579036841262 0.000982152773054773 0.000491027986743284 0.000454140345859524 0.00052746287521083 0.000538601928653286 0.000397302869586837 0.000100248557534621 4.99364359397278e-05 9.82408711038837e-05 0.000135606282234588 0.00564572338332549 0.00320469553713033 0.00345923477840194 0.000977854188665874 0.00188648057933483 0.000319484848071336 0.00157712125983803 0.00236676402423624 0.00360419058522108 0.000753279649949093 0.00066213637758338 0.000533369180892855 0.000714783443584413 0.00037174904258851 0.000203116213227646 NM_004690.3 LATS1 Homo sapiens large tumor suppressor kinase 1 (LATS1), transcript 0.0 1131 83.14 0.681203931203931 0 noncoding 0 0 0 0 0.277691105660294 0.227514363409831 0.00222639531078087 0.964187156822833 GGTTTTTTTTTTTATTTGTTTCTTAAAGGATTTGAATTTTGCTTTTTTTTTTTTTTTATTATGATCCCAGCAAATGTTACACTAGAGAAAATGATTGGGAAAATACAAATAGATTCATTAAAAACACAGGCTGATTATTCATTTCTACTACATTCATAAGTATGCAAAACAATTCAGTTATATTGCAAAGCTGTAATTCCTTTTCCTAACAAAGCATTACTTTATAAAACTGTAGTGTTGTACTGATTCAATTTTAATACAAAATACTTATATACATAATACAATATAAAAGTAAACTGTGGTATATAGTGCCTTCACAAGGGATCTATTAAGGCGCTTTACAAATATACCATTATATTGACCAAAATTACTTTTTGTTTTAGATTAAAACAAACAGGCTAAATGTTTTACTTTAAATACCAAAGGGATTTTTGTTTATTTTTGTTTATTAAAGAAAAATGTCTAAAGTACCTTAGGTAACAGCAGCAGCAATATCTAAAAATCCTCCCACTGTATTCTCTAATTTCAACATATTATTAAGTCAGAATAAATCATTTCCACTCACAGTTTTGCACTTCGCAACAGCAGAAGGTAATAACTTTTTTAAAAAGTCAATTTCAAAGTGACTTCTTAGTCATACATTCTATAGTTTCTATTACAAATAAGGTAGAAAAGATATAGCAACAGGGCCTGCCTTAGGACATCACTGGACAATACATAACTGTATCTACAATTACATACTTACAGAACACATTTCATAAATACTATTGATATGCATAAAAGGGGAAAGTATAAGAAAGACAGCAAGTTTTTTTTTTTTTTTAATGACTGGCAAAATTATTTTAAAAAGAAAACATGATTGATCAGTGTTTTCACTCTATTTCAACTGAGAGCATATAGATTTTTGACATTGGTCTCATCTTTTTGGCAGGAAGCACCAGATTCCTACTGGAATATAGTTTGGGAATAAGTCAGCTTAATATAGTTTAATAGTTTGGGAATATGACAGTATATCCAAACTGTTAAAAAATGCAGATACTAAAGGCTTGTACACTGCTTCATTTAAATACAAAAAGTTTATATTGTCAGAGGAAATTTAAAAGGATACAATATTTGTAGTGTCTTACATTTGAGAAGTAAAGGCAACACAGATCTTGTGGGGAGAGGGGGAAGACAGCACCTTAGTTTTTCTACAATGTAACTGTAACAAAGTTGGTTCTCTACTGTATTGCACCATAGTCCAGAAATAAAAACTAAATGGAAATTTCAATAAATCTGAGAAAGCCTGAAGAGCAATGGGGGTAACAACAAAAGTTCTTGAATTAATATGTTTTGCATAGAATTTCACAGGACTAATCAAATGCTCCATGAAGACTGCTGTCTTACACAGTGCATTTTCTCACAATTCTGAGTAGAGGTCCTTCAAAATATTTCTGTATTAAGACTGTAACAAGTCAAACATGTATGTTAGTGCCCTTGAAAGGGTATGTTTAAAGTGGAGCGCTATCCCAGAAAGAGGCATTCACAAGGATATCTTATCACATGGTACAGACCTTTCTCATCAGAAATTATCAGTTTATACAAGATGTGCTAATCTGAGCACTCATCAGTAAATTTAAAGCAAAGTT EMBV3_21017 GTCAGTGGGCCAGGAACGCGGGGGATGGTCTTTTGATAAAAAAAAAAACAAAACAAAACA Gene GeneID:534383|FBXO18:NM_001099063:16_cdna Constitutive 2 NULL GeneID:534383 13 GENE FBXO18 MGC157095 F-box protein, helicase, 18 EMBV3_38289 ATGCCGAGAACCTCCTGTCGCTCTGCAAGGAAGGCAGCTACCTTGTGCGGCTCAGTGAGA Gene GeneID:518715|SHD:XM_002688921:91_cdna Constitutive 0 NULL GeneID:518715 7 GENE SHD NULL Src homology 2 domain containing transforming protein D EMBV3_08400 TTGGACACTTTTCAAACTGCACCCTAAAGAGGAAGCGGAGAGACAGAGACCCCTGCTCCC Gene BVT0102_022433 + 0 NULL GK000016.2:62470465-62493956 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069882 TCONS_00067877 TCONS_00067880 TCONS_00067882 TCONS_00069883 TCONS_00067883 2 XLOC_042076 XLOC_041554 Coding TCONS_00067883 XLOC_041554 Coding Coding FAM163A 16:62469886-62474184 j TSS50945 4110 2 TCONS_00067883_12 153 3 0.0442168955084943 9.58999201712577e-24 0.000636146934463873 9.84844593606129e-08 3.98306874453541e-08 0.000137399404665521 0.000422665468153511 4.88515279995599e-05 6.8789754164876e-05 2.23518207112244e-12 0.000318710242651618 2.8985886558472e-06 0.000118893990817003 0.000304566506353912 2.01739590393648e-09 0.00035368433109346 1.48667367382643e-05 0 0.000408997860480116 4.06393102711534e-16 0.00067593937927144 8.24244072045051e-09 0 0 0.00010195731956751 0.000614751084549596 1.83446457142154e-07 0.000216847606580299 5.49559435236906e-13 2.94110371838804e-05 0 XM_864299.4 FAM163A PREDICTED: Bos taurus family with sequence similarity 163, member A (FAM163A), transcript variant X2, mRNA. 0.0 4675 100.00 0.630413625304136 XM_005244912.1 FAM163A PREDICTED: Homo sapiens family with sequence similarity 163, member A (FAM163A), transcript variant X1, mRNA. 0.0 641 82.71 0.154257907542579 0 coding 1 0 0 0 -1.78337695040731 0.00297130041804796 -0.0640220714191895 0.273781040228033 GGCCGGGAGGACTTCGCTGTGGACCGTGGGCTCCTGGTGTTGACTTTATTACTGCTGCAAGAAGAGCAGAGCGGAGGATGCAGACGAGGAAGGGGAGGAGGAGCACGACCTGCCCACACACCCCAGAGGCCCCGCCTGCAATGCCTGCAGCTCCCAGGCTCTGGACGGCCGAGGCAGCCTGGCGCCCGTCCCCGGCGAGCCCTGCGGCCAGCCGTGCAGGGTGGCGGCCGGCCACTGCACCGCCTGCTCCCCATACAGCTCCCCCTTTTACATACGGACGGCTGACATGGTGCCCAACGGGGGCGGAGGCGAGAGGCTCTCCTTTGCTCCCACCTACTACAAGGAGGGGGGACCCCCATCTCTCCAAGTGGCAGCGCCCCAGAGTTACCCGGTGACGTGGCCAGGCTCTGGGCGCGAGGCCTTCACCAATCCAAGGGCTATTAGTACAGACGTGTAACCCCTTTCACCCCTGACCCGCCCCCAACACACACCAACACGGCTGCTCCCCACCCAGGATCATCAATGGGGACAGTGGACGACCCCTCCCACAGCCTGCAAGGACCTTCTCAGTTTTTCTGGCTCTCCTTGCCCCACAGTGGAAGGCTCACCTGGATTCAGGCTGTTGAGGGCACTGAGAACCAGGGCAGGGGCTGGCCCCATGGCCCAGAGGAAGGGGGCCTGACAGCCCTCACACTTACCTCTGTCCCCTGGCTTTGCCAGACTCTGAGGAGACGAGCAGGAGCCCAGGGAAAGCTAAGCAAGGGCTCCGGAGGTCTCCAGAGTCCTTGGGGGATGAAAGGAGAAAGTCGGGGGTGAGGGCAAGGGGAGAGGCCAGACCTGAGGCCTTGGCAGAACTCGAGAAGGGTGGGCAAGGATTGAAGGGCTTTTTCGGGACCTGCTTGCCACAATGAATCCAGGAGCTAGTTCACCATCTCATTTTGTACTTCAGCTTCCTAGAGACTGCAGTTCCGGTAGCTGTTCCAACACAGATGCTACTTCCTGAGCACGCTTGTATTTGCCCCCATCCTCACGGAACATAGCGACTAGACTTTAAAGGCCGTGGCATGAGGTTATTTGCAGGGAATGCACCCAACATGGATGTCTAGCCTTGTCTCCCCACAAATCCTCTTTCTCTGCCTTGGGAACCAGCTATCCCGGCTGTTGAAACTTTTCCAAGTTTTGTTACTAGAGTTTGAGTAGCTTAGTGAGGGAGAGCCTGCCGATGGTGTCTGGGGCCCTGGTCCACCACGCTGAGTGTGGTGCCTCGATGCGGCCCTGCAAGGACCTGTGCATTCCCAGGTGTATACACACACACATCTGTCACCACCAAGTGTGTACAAACATCACCACCTGGTGTGTGTGCACACACACACACACGCCTGTTACCACCACGTGTGTGCACACATACCACCATCACCAGCGCTCACCAGGGCTCTGCCACCTTCAGGAACCGCAGAGCAGAAGAGTGATGTGGCAGCTAGAAAGTCAGCCTCCAGACAGCAGGAGTGACAGGTGATCAGGGTGGCAGCCACAGCAGCCACTGATGGGTACAGGAAGCGCCTGCGGAGTCTCCCGTGAAACGATCCTGCCACGTGGAAGCCCCTCCGGAGACCCAGTATCCTACCTGGGCATCCAGCCGTGAGGCCGTAGACCAGCACCCCATCTTCCCATCAGGGATGGCAGCGCTGGCTCCGAGGATGGGAGCAGATTTGACTCAGCAATCAGATTCCACGCTGGCCACCCTCCCTCTGCTGACCCAACCCTCAGTCTCTGAACGAAGGCCTGTTTATTGCTGGGTCGCTCCAGCCCCAAGTCCAGATCCCAGATATAACTCAGCTGTGGCCTTATGCTGTTTGTGTGGCTGCATCTGATGAGTGTCCCAGTTGATGTAAGGGATGGCTGCCCACCCTCTCCTAAGGGCATTAGTAACCCCCAGCCTCTCTTGAGTCATTGCAGTGTGTGGGACAAGAAGGGAGCAGGCCCCTTGGCCAATTTTTGCTGAATTTTGATTTTTGCATCTGAGAAAGGGAGGGTGCAGCTGGGGGAGGCATGAAGGGGAAGAGAATTCGCCACACCTTTGCATCCCTCTGGGCACTTCTCACCTTGCATCTCAATCTGGAATCAAGGCTAACTGGGTTGAGAACCAGAGGACCTAGGGTCTGGTCACATTTGGGTTACTCTGGGTCCTCTGAGGACCGGTCCCTTATCTCCTCTGAGACCCCATTTCCTCCAGGGAAATGGGACTCGCCCAGATGGACTCTGAAGGCCCTTTAGTGCTCCAGGAAACCAGGATTCCCCGAAAAGTCCTGCCAGCCAGACCACTCTCTCTCACCCTAGTCCTGGCAGGGGGCTGGATACACTTTCCAACTGCCTGATCCCGTGTGCACGGATGCATGTTGATGGATCCAAGACCACAGTACATTGCAGGGTTAGCTGGCAAAACAATTTTAACATCAGAAAAAAGCCAACACGTTTGACCCTCCTACTGGGTGACTTCAAGTTCTCTGCTACTAGGAAGCAGCTTTCAGTGGGGGTAATCAGCTCTGTCTCCCAGAGCCCAGAGGGACCAGCTTAGGGACAGTGGCTTTCACATCCCCACACCCATCCCACTGACAGCCCTTCCTGGGCTAAGCACACCCGTTGATGTGAGCTGCTAGGCCTGGCCACCCTAGCTCTTCCTGATGGCCAGCCCCAGTGTCTTGCTGCCATGGGATTCCACAGTTGCACAACCACATCAGGGGCTGTCCCTCCTCACCCCCAAAATTCTAGTACCTCCCACCTTCAGAGAAGTCAAGACCCAGTCAACTCTTAACGTGCTTCTTGGCCCTCATTCTTTGAGATCCTGGAGTGAAAAGCATCTTCGTGCAGTCCCTCTCTCCTCCCAGAGCTTCCCCAGCCTCAGTCAACCCACAAGTCAACGTCTGAGTTTGGGGCATTGGAGAGATGGTGGCCGCGGCTCCCCCTGCCCCGACTGCGCAACGCTGCTCCGGGCACAGCCTCGAGGTTGCCCGCCAGCCTCCCAGCAGCTGCAAGGACCTTGCCTGTGGAAGAGGAAGCTCACCCCACTCCACTGCACTGTACTTTTTGGCCACCGAGTCTGTGCTCTGGGACACTGTTTGGACACTTTTCAAACTGCACCCTAAAGAGGAAGCGGAGAGACAGAGACCCCTGCTCCCGCCAACTTTTCTCTCCACTTCACTGCTCCTGCTACAGAATTCTTGCCCTGCATCTTTGATAACTTGGAGTCACAACCAAGCAAATGTCCAAAATAAAGGAGAAATTTGAAATAGAAACCCCCGCAGGGTCCTCGGTACTTTACCTGGGGGAAGGGGCAGCGGGGCACGGACTGAAGACTGAACACCCCCTTCTCAGCGCCCAGAGCGTCCTTTCTCTGCACTGAGATCTGCCAGCTTCCTCTCCCTTCCGGCTTCCCTCTGCTGTGCCCCCTGCCACCCCCCATCCCTTTTCTTGCCCTAATCAGAGCTCACTTCCAGGAGGGATGTGTCATGTGTTGGGAAAGGGGATTGAAGCATAGCTGCTGCTGCCTCCTGAGGTGGAAGGAGCCTTCGGCTGATGGTGGGGAGTCTCCCTGGGGAGCAGCCTGCCCCCCAAGCCTCACTGTCCAGGCCCCGGTGTCCCCCCCTGTAGTTTGCCTTAAGTCCCCAACTCTGATGCCTGAGGAGACCCTGACAGCCTGAGGAGGGAAGGCCAGAGAGTCTGGGGACCCGCTCCTGAGCTCAGCAGGGATGGTGATATCGTGAGAGGCGTGTGGTGAGGACCAGAGAGCCAGGGCGGAGGTTCTTTCTGGGCGAAAGGGAGTGTTCTGGGAGGACGAGGGTGAAGCTGGAGCTGTGCACATGTCTGTGAACATGTGTAAGAGAGAAAAAGAGAGACACCCACGCCTCGTCCCAGGACCACACAGCCCGCGGGGCAGCGGGCAACCTGGCCTGAGTCACGCAGCACCCAGGCCCCTGGAGTCAGGGTGCTCTGCCCCGGCAGGCCTTTGACACTCAGCCAGGGGGCAGTTGGCTACAGCTCTGTCACCAGCTGTCCCCTGGGAACAAAAAACCTGAGGCAGCCACCCCAGGCTTGAGCACCTCCCTCCTCCAC EMBV3_43701 CTGCAGCCACACACGCCTTTAGGGACGTTTTCCAGACTGAGTGTTGCTAACCAAGCAGTG Gene GeneID:540993|DHX57:XM_002691289:377_cdna Constitutive 0 NULL GeneID:540993 11 GENE DHX57 NULL DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 EMBV3_25550 TCGTGAAGGGCGTTTCCACCTTTGTCACAGTCGCAGGCTCAGTGGCCAGCTACTGGGTGA Variant GeneID:514305|TMEM141:NM_001034462:32_cdna 168^251 1 EMBV3_30864 GeneID:514305 11 GENE TMEM141 MGC127716 transmembrane protein 141 EMBV3_25712 CAGGGCTTCCCCTTCTACGACAAGCCCATGGGCATGCCGCCGATGACTCAGGCGCCCCGC Variant GeneID:509802|SNRPA:NM_001046039:577_cdna 331^510 2 EMBV3_24426 GeneID:509802 18 GENE SNRPA MGC137110 U1A small nuclear ribonucleoprotein polypeptide A EMBV3_16079 ATGAGCCACAGACGAGATAGCTCCAGATGGATTTACAGAAGCAACAGCAGTGGCGGCTAC Gene GeneID:100295501|LOC100295501:XM_002697896:489_cdna Constitutive 0 NULL GeneID:100295501 25 GENE LOC100295501 NULL similar to ribosomal protein L37a EMBV3_25729 CCAGGTGGAATCATGCTGAAAGAGACAGGCCAGGGTTACCAGCGCTTCCTCCTCTACAAT Gene GeneID:505830|APOM:XM_002697369:372_cdna Constitutive 0 NULL GeneID:505830 23 GENE APOM MGC128780 apolipoprotein M EMBV3_00955 TGTGCTCCACAGCTACCAGGACCACTTGTGAGCAAATGGACGAGCTGCTGCAGACGTGCT Variant GeneID:511844|LGTN:NM_001035104:55_cdna 600^838 3 EMBV3_29794 GeneID:511844 16 GENE LGTN MGC137442 ligatin EMBV3_13150 GACTCCGATTCCACTTCCTGGGTGACTGAAACCATCCTTGTTACTCTGTTTGGACTGGGG Gene GeneID:100141230|LOC100141230:XM_002689856:58_cdna Constitutive 0 NULL GeneID:100141230 8 GENE LOC100141230 NULL similar to chromosome 9 open reading frame 79 EMBV3_32969 AGCAGGTGTGCCAGATCCGCAAGAAGATGATGGAAATCATGACCCGAGAGGTGCAGACAA Gene GeneID:613460|LOC613460:XR_083611:520_cdna Constitutive 0 NULL GeneID:613460 2 PSEUDO LOC613460 NULL similar to ribosomal protein S3a EMBV3_36891 CATTGGGAACTCAGAGTCTTAGCCACTGGACCACCAGGGTAATCCCTACACAGGTAGTTT Gene BVV0102_367178 + 0 NULL GK000019.2:23673089-23859291 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32592 GAACTTGTTCACTCTGACAATCTACAACTCCCTGGTGTGAAGAAGCCCATCTGTCTCCCA Gene BVV0102_404122 - 1 EMBV3_19758 GK000007.2:59075335-59136027 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17856 GGTCTGACCAAAATTCCTTCTCCGCACACAAGGCCAGTATATGCAGCATCACACCTGTCT Gene GeneID:511883|ANKRD13A:XM_002694528:461_cdna Constitutive 0 NULL GeneID:511883 17 GENE ANKRD13A NULL ankyrin repeat domain 13A EMBV3_01935 GCATTAGGAGCTGGGGATAGAGCATTTTGCCTGACTGAGAAGCACAACTGAAGCTAGTAG Gene GeneID:281170|FRZB:NM_174059:2_cdna UTR3_Alt 2 NULL GeneID:281170 2 GENE FRZB MGC137621 frizzled-related protein EMBV3_39112 AGCTCGAGTTCCTTCACCCCAGGCAGTACGGTTCCTCCGACCAGCTCCACGGCAGGTCCG Variant GeneID:515039|CCDC88C:NM_001102017:241_cdna 694^762 1 EMBV3_21268 GeneID:515039 21 GENE CCDC88C MGC160122 coiled-coil domain containing 88C EMBV3_35433 GATGGTCCTGCAGCTATCCAAAGAACCTTCCGCCCGTTTGCTGAAGCATGTAGTAAGATG Gene GeneID:536537|RQCD1:NM_001101167:107_cdna UTR3_Alt 4 NULL GeneID:536537 2 GENE RQCD1 NULL RCD1 required for cell differentiation1 homolog (S. pombe) EMBV3_12658 GAAGCTGGCAGAAAGGATCAGCTTGATCAGGTACTATTTATAGACAACTGGCGTGTCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10101 AGGAGGTGGGCAGAGGGTGGTAGTGGTATGGACAATATAGTCTTTTGTATTTTGAGACCC Gene GeneID:506187|ACAP2:NM_001105337:63_cdna Constitutive 0 NULL GeneID:506187 1 GENE ACAP2 CENTB2 MGC139548 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 EMBV3_27289 GAGCACCGCGATGGCAAAGTTTTCATGCCTGGGAACAAGGTCCTCTTGCACCTCAATCTT Gene GeneID:511219|C3H1ORF92:NM_001105357:123_cdna Constitutive 0 NULL GeneID:511219 3 GENE C3H1ORF92 MGC152404 chromosome 1 open reading frame 92 ortholog EMBV3_04953 CTCATTACCTCTATGTGAGAGAGCACAAAGTTCGAGAAGGTACCAAGTCTCCCTGGCCTC Gene GeneID:512692|RRP7A:NM_001110074:162_cdna Constitutive 1 NULL GeneID:512692 5 GENE RRP7A MGC133533 ribosomal RNA processing 7 homolog A (S. cerevisiae) EMBV3_06354 GAAGGTTACATGGCATTTTCTTCTCCGGAACTCCAAGCCCAGATGGAGGCCAGGGGCTTA Gene GeneID:520318|PFAS:XM_002695870:363_cdna Constitutive 0 NULL GeneID:520318 19 GENE PFAS NULL phosphoribosylformylglycinamidine synthase EMBV3_25899 ATATGATTGACAGAGCAGGGAAAGAGAGAGGCCCAGTCTCACAGGAGGTGACAACGAGGT Gene BVT0101_068353 + 0 NULL GK000020.2:8804334-9075830 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06808 AGCAACTCGAATGAAATCCACTCAGCAAAAGACCAACAGAGGACGGAGAAAAGTGGTAGC Gene GeneID:531234|NCAPG:NM_001102376:186_cdna Constitutive 0 NULL GeneID:531234 6 GENE NCAPG HCAP-G MGC148424 non-SMC condensin I complex, subunit G EMBV3_40816 ATCGGACACATCTTTGGCCTCCGGCACTGCCAGAGACCGGTACAAAGCACTGGTCAGGTG Variant GeneID:515126|AMZ2:NM_001034481:19_cdna 820^935 2 EMBV3_05483 GeneID:515126 19 GENE AMZ2 MGC127801 archaelysin family metallopeptidase 2 EMBV3_24273 GGGCAGACGTTCTGCAACCTCGATGGCCATGTCCGGGATACCCTGATGCTGGCGTACAAG Variant GeneID:534607|CIDEC:NM_001076031:158_cdna 184^337 1 EMBV3_22518 GeneID:534607 22 GENE CIDEC MGC139113 cell death-inducing DFFA-like effector c EMBV3_40753 TCTCTTCAGGCTAAACTAGAACGGCTACATTAATTATTGTAATGTATTTTCATCCCTGCG Gene GeneID:506738|NUP155:XM_002696373:80_cdna Constitutive 0 NULL GeneID:506738 20 GENE NUP155 NULL nucleoporin 155kDa EMBV3_36068 TCGCACACCCACATGTTTTTGTGAACACTCCCTAGAGCCCATCAAGAACCAAGTCTCTTG Gene BVV0102_277979 - 0 NULL GK000029.2:9355670-9613011 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166294 1 XLOC_101132 NonCoding TCONS_00166294 XLOC_101132 NonCoding NonCoding - 29:9609621-9611796 - TSS124272 2175 1 TCONS_00166294_1 61 0.346666666666667 1 0 0 9.23994117491084e-06 0 0 0 0 8.04373167162289e-06 0 0 0 0 0 0 3.08964891886e-07 0 0.00137218674414886 0.000343494091893761 0.000334545357654718 0 0 0 1.70590111506489e-05 0.000717051834036453 0.000100202265262733 0 0 0 8.83234836493316e-05 4.46400635058189e-06 5.52850742208643e-06 XM_005221235.1 LGALS3BP PREDICTED: Bos taurus lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP), transcript variant X1, mRNA. 3e-50 205 86.90 0.0767816091954023 0 noncoding 0 0 0 0 -0.0173159450633392 0.923774028300935 -0.057426183143418 0.357278332681596 ACGTTATAATGAGTTAGGTGATAAGTGCTTTGGAGAGAAATAAAGCAGAATAAGAGGATATAGTGAGGGTTTGGAGGTAGAGGATTGCCTTAAGGCTTTGTTACTTTTTATAAATATTCAGAGATGTTCATCTGATAGGTGACATTTGAGCAAAGATCTATAGTAATAAAGGAGTAAGAGAAGTGTGGATATCTGGGAAAAGAATATTCTAGGCAGAAGGAACAAAATACACCTGAGGTTAAGAGTGCTTGGCTCGTGGAAGGCATTGCAAAGAAGACAGTGTAACTGAAGCAAAGTGATGAGGAGAGCTGATCACAAAGGGAATATACCATAGATGCAATATACGTAATCTACTGTATAACATGCTCATTGAAACTGAAATCTACACTTTTCCCTTCATTTAGAATCAGGCTGTCTCTGACTAATCCAGCGATTTACTTACCTCCCTGATTAAGAATATGGAAAATTACCAACAAAAGTATTTGCAGATTCGTTTTAAAATCTCTGATTCTAGACGAGAGTGATGGGGAAGTAAATAATAAAAGAATAGAATTGTGTACCAGCTTTAGTGTCTGTGTGGTGGGTACCTTAGTCTGTGGAGAGGAGAATTTCACAAAGGAAAATACATCATTCATTTTGAGGAATGAGCAAGAATGGAAGGATTTAGGTGTGAAGCAGCAATATGTGTATGTGTGTGTGAGAGAGAGAGTCGCTCAGTTGTGTCCAACTCTATGGACTTTAGCCCTCCAGACTCCTCTGTCCATTGGATTCTCCAGGCAAGAATAATGGAGTGGGTAGCCGTTCCCTTCTCCAGGGGATCTGCAGGACCCAAGGATTAAACCCAGGCCACCTACATTGCAGGCAGATTCTTTACCATCGGAGCCACCAGGGAAGCCCGTCTTGGAAGTTAAGGTTCAACAAGGAGGATGGGAGATCATTGAGGTTAGTCAGTGTCATGGCCAGTTTTTATTTGGGCATGTGGGGTAGGTGAGACCCCAAATGAGATCTCATTAGAAGTGAAGAGGCCAGTCAGTCCAGCATTTTCTTAGTGGGGACAATTTTGGGTGGAGCAGCTTTTTTTCTTTTTTAATGTTTGTTTATTTTTGGCGGTGCTAGGTCTTTGTTGACGTGGGGGCTGCTCTCTGGTTGAGGTGCATGAGCTGCTCACTGCGGTGGCTTCTCTTGCTGCGGAGTGCGAGCTCTGGGCGTGCGGGCCTCAGTGGTTGCAGCTCTGGGCTCTAGAGCACAGGCGCAGTAGGTGTGGCGCGCAGAGCCATGTTGCCCAGCGTGGGGGAGATTTTCCTGGATAGGGACTGAACCCGTGTCTCCTGCAGGTGGATTCTTTACCGCTGAGCGGGGCGGGGCAGCTTTTAATTGCGGAGAGTCAGTTGCGCATGGCATGCCAGTCTCCCTCAACTTTGTCCTCACATGCCAGTAAAGCCCTTCAGAGGGTATGATAATTCCTCCCTAACTTGGTTCTAAATACTCCCAGGACTGGTTGACTTCTAGTTAGGGAAACATAGGATCTTCGCTCTGGCTTTGTCAGTGATAGTGGGGTGGAGAGGAGAAGGTGGGATATCTAGAAGTTCAAGAGACTTGGTTCTTGATGGGCTCTAGGGAGTGTTCACAAAAACATGTGGGTGTGCGAACACATACACACATGTAGAAGTGCCCTTGGGCAAGTATTGTGACAAAAAATTTTGTGACAGGTTCAGTTTTGCAAAGTAAGATTCTGAGGAGTAAAATGATTATTGACATCATTGTGAGAAGTAACTGTTAAATGAATAACTTACAAAGATAATTTCTGGAAGGATAAAGAAAAATACAGATACATAAGAATAAATCCATGGGAAAACAGGAAGCTAGGAATATAATTTCATATATTAAAATCAAAACTTGATCACTGTGTTTGACGTTTTAAAGGGTTCAAAATGAGCAGAACATAGATAGGGCTTGCTCCCAGTAAATTATATTTTGAGAGAGAGTATCTTTGGAATAAGGCAAGTACAATATATTCAGTGTCTTGGGGCAGGTATAAAGTACTATTTAAGATCAAATTTAAAATAGGAGAAGTAAAATATCAGAAGCTGAACCATTCAAACCAAGTTGGATGAACTATTTAATTTTTGTTGCAAGTAGTATCAATTGTGAAAGCCTTGTGTTCCATGGGCATTC TCONS_00163018 TCONS_00163019 TCONS_00163020 TCONS_00163021 TCONS_00163022 TCONS_00163023 TCONS_00163024 TCONS_00163025 TCONS_00163026 TCONS_00163027 TCONS_00163028 . 5' 1214 TCONS_00163018 TCONS_00163019 TCONS_00163020 TCONS_00163021 TCONS_00163022 TCONS_00163023 TCONS_00163024 TCONS_00163025 TCONS_00163026 TCONS_00163027 TCONS_00163028 . 5' 1214 EMBV3_08062 TGTTGAAGGTGTTCCTGGAAAATGTGATCCGTGATGCGGTCACCTACACCGAGCATGCCA Gene GeneID:529647|LOC529647:XM_002697503:196_cdna Constitutive 0 NULL GeneID:529647 23 GENE LOC529647 NULL similar to Histone H4 replacement CG3379-PC EMBV3_26203 CCGGCAGGGCAAGTTCAAGCCCAACAGTGTCACGTACAGGACCAAATCCGGCAACATCTT Gene GeneID:767607|DHX30:NM_001076535:325_cdna Constitutive 0 NULL GeneID:767607 22 GENE DHX30 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 30 EMBV3_40595 TTTTGGCAACAGTTCAGCTATGGAGCCTGCTGTATCAAAACCCCAGGGTGCGGGTCATTG Gene GeneID:100138604|PKD1L3:XM_002694909:990_cdna Constitutive 0 NULL GeneID:100138604 18 GENE PKD1L3 NULL polycystic kidney disease 1-like 3 EMBV3_28889 GGCAGAAATGTTTACAGCAGTGAAAGAGAGATCAAAAGCTAAGACCCATCCTGTAGCCAG Gene GeneID:527239|JAKMIP2:NM_001075897:67_cdna Constitutive 0 NULL GeneID:527239 7 GENE JAKMIP2 MGC140555 janus kinase and microtubule interacting protein 2 EMBV3_06810 TGCCGGTAACACCAGTGAGATTCAAGATTACTTGCAGCAGCTCACCAGAGCCAGAACGGT Gene GeneID:783653|LOC783653:XM_002700373:21_cdna Constitutive 0 NULL GeneID:783653 X GENE LOC783653 NULL similar to Glutaredoxin-1 (Thioltransferase-1) (TTase-1) EMBV3_41199 TCCCTTAGCTCTGCTGGAAGCTGGAGGGTGCTAGGCCCCTGTGTAGTAGTGCATAGAATT Gene GeneID:538444|SET:NM_001038564:169_cdna Constitutive 0 NULL GeneID:538444 11 GENE SET MGC134241 SET nuclear oncogene EMBV3_26682 GGCCAAAAAGCAGTAGTAAAAACGCAGGGATAGTGAGGCAGGGAGAGTGCAAAGGCATGT Gene BVV0102_068084 - 1 EMBV3_43634 GK000007.2:73952037-74035570 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06491 GCTAGTCTGTGCTTACTGAGTGTGTCTGCAATGTGTGTTGTTTCTTTTATCGTGGTCTCC Gene BVV0102_170861 + 0 NULL GK000005.2:21546254-22086068 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42867 ATCTCAAGTAGAACGGCCCCATCTCTGTTCTTCCTGGGGCATGTATGACGCTCAGGCTTT Gene GeneID:524115|GABRE:XM_002699672:45_cdna Constitutive 0 NULL GeneID:524115 X GENE GABRE NULL gamma-aminobutyric acid (GABA) A receptor, epsilon EMBV3_36351 GATCTGTGTTTTTCTTTTTCCACGAGGAATGAATAGTAGAGAACAGACTAAATTCTTACG Gene GeneID:519632|NQO1:NM_001034535:270_cdna Constitutive 0 NULL GeneID:519632 18 GENE NQO1 DIA4 MGC129020 NAD(P)H dehydrogenase, quinone 1 EMBV3_23986 GCAGAACTAGTAGACTTCCTCTTGGCCCTGGTGATGATTCTGCTCCCTCTAATGGCTGTG Gene GeneID:528499|LOC528499:XM_002685937:95_cdna Constitutive 0 NULL GeneID:528499 3 GENE LOC528499 NULL similar to olfactory receptor 414 EMBV3_06035 GTCCAACAATAAAAGACAACGGCTTATACATTCATGCCCAGTCAATATCCTATGGGCTGG Gene BVT0102_050654 - 1 EMBV3_33380 GK000001.2:120315814-120401469 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02370 GTTACCGACAGAACAAGGAGACTGGGAAATATGAAGAACGGAGCCGAGGACGTCAAACAG Gene GeneID:505773|PRKX:XM_002700423:13_cdna Constitutive 0 NULL GeneID:505773 X GENE PRKX NULL protein kinase, X-linked EMBV3_03824 GCTGCAGTGTACTACCCTCACTACTTCATCAGAGATCCATTGACTGCATTTATGGGGGCC Gene GeneID:507722|VPS24:NM_001035051:56_cdna UTR3_Alt 3 NULL GeneID:507722 11 GENE VPS24 MGC137735 vacuolar protein sorting 24 homolog (S. cerevisiae) EMBV3_16379 CTGACCGGGAATTGGAAGAGCTTCTGGAAAGATGCCCTCTTCGCCTCCCAGGAGAAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11296 TCACAGCTCTGCAGTCTCCCTGAGTCTTAGATGGTGCGTCTAGCTGCTGAGTGGACATCT Gene BVT0101_004212 + 0 NULL GK000023.2:49420479-49451462 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133641 1 XLOC_081164 NonCoding TCONS_00133641 XLOC_081164 NonCoding NonCoding - 23:49431404-49434360 - TSS99765 2956 1 TCONS_00133641_3 150 0.160013531799729 1 0 4.19243907711512e-05 0.000304068329707906 0.000186061505694247 3.75156299953698e-05 5.32546963777734e-06 1.35111077777334e-06 1.25951408251099e-05 1.05607065148198e-51 6.80914440171791e-06 1.14185430414711e-88 0 0 0 3.73827362529712e-54 0 0 0 0 0.000119881621354459 0.000508862188821947 0.00031986526426153 0 0 0 0.000564872296991399 0.000200443638666794 0.000225492704045449 2.71493514708655e-51 0 0 XM_005216152.1 TRIM21 PREDICTED: Bos taurus tripartite motif containing 21 (TRIM21), 5e-74 284 86.86 0.0788227334235453 0 noncoding 0 0 0 0 0.184693482970637 0.205303959066423 0.0722529768778181 0.171349623946356 CGGTGGGATACAATCTTTTTCTTTTTTTTTTCGCCTGAAGAACATCCTTATTTTCCTTCCAGGCTAATAGCAAAGCTCACCAGTTAGCATGACATGTTGTGTTTACAGCCCTTTGCATATAAGTGCTGAAATTTTGAGCAATGATGTTCAGGCTGTCAAAACAATGAGTGACTGGTTTCTTCGTTTATTAGTTTAACATTCCCTGCTTTCAAGGTGCTGTAGTCTAGTGAGAGCTTATTAACACACTTAAGCCTTAGCGATAGGTGGTGTTATCTCTGCAGGTGAGGAGGCAACGTCACCTGGCTGAGCTCACGCTCCTGCAGATCTGCCTTTGAGCCTCTGCTGGGCCCCGAAGCTGCGTTCCTTCCGCCCCTCGAACACCCCCTCCTCCGGTGCCGAACACACACGGGGGGCTGAGGAAGCAACAGCAGAGAACACAGCCAAGAGTAAAGACCTTTTAAAAGTGACTTGCAGTTAAGTTGAGGCGGGAGCTCCTGGCAGCAAAATCCTGTAGGCTTTGGCTGATTTTCTGCTGCTGTGTTATGCTAGTGGGTCTGGTCTTACCCTTCCGCATTTCTAATAGTGTTTTTAGAAACCACCTGTAAAAGTAGTCAAGGTCAATGGTAAGGAAGTCAGTGTTGGGGCAGAGGTCACTGGAAGGAGCTGGTTATTAAGGGCTGAGTGATGTCTCCCCAAATTCACAAGCTCAAGTCCTAACATGTCACCGCCACCACCGCCACCACCCCGCCGCGCAGCAGGTGAATATATTTGGGGATCAGGTCTTTAAAGAGGTGATTAAAATCAAAGGACATCTTGTGGGTAATGGGTTCTTATTAAAAAGCGACTGTAGGGCTGAGGACACAGGCGGAGGCGTGTCCACAAGGCCAGAGGCCTCAGGAGAAACCGCCCGAGCCATCTGGATCACGGCCTTCCAGCCCCAGCATGGACCCGAGTGGAGCGCGGGACGAGCTGGCCCCTCACAAGCGCGCTTTTAACTTGAGTGGAGGAGGGGAACTGGAGGGGACCTGCCCCCTTCTTCTCTAAGGCCTTTCAGAGCAGCTACCCCTCTGCCTCCAGCACTCTGGGGAGGGAAAAAAAAATGCATATGTAAAGGAGCCTGAATTTAAAAAAAAAAAAAAAAGCAACAATGCATGGAACCCGCCAGAGAGGGAAAACATCCATTTAAATTCTTGATTTGCATCCGGAGTCTGCTCCATCGCAGACCCGGCGCTCACAGCAGTCCGCTGGCCCGTCTGAGACAAAACGAGGGAGAGGAAGCCTGGCTCCCTGGAGCCAAGAGCAGCTGGCCTCCCAGGACGACACGGGTCGCAGAGTTCGGCTGGAAGCAGACCTGCCCAGCCCTGCCGGAACTGTTGGGGGCCTGCGCTCCGTGGGTCAAAGCAAGCAGGGCCAGAGGCGGAGGGGCCGGCGGAGGGCGCCAGGAGAGCCGGGGTCCCGCTCGGGCTTCCCCGTCGCCTTCTCAGCCTCCCTTCGGATCCTTGAGCCGCAGATCTTCGACTTTTCCTGCCCAAACCCAAGCCCACCGGCAGAGAACCTGCAGTTTGCAGAGCCACTCCGCTTCGCAAGTGCTGTTTCGTTCCTAGTTTTCTGGAATTCCAGCGACATCAGCCTGTGCCTTTCATCTTCAGACCTGAGGCCCTCAGACCTCTGAGGTGAGGATGTGGGGGAGCCAGGCAGCGCCTCAAAGTGCAGCCTCCCTGACGCTCAGCTGCCTTCCAGGGACCAAGATATACCATCTGAGAAAAAGCAAAGCAGGAGACATGCAAATGACGCCACTAACCTCCTCCCGCTTCCAGCCCTGACACACCACAGGTGCCCAGTAGGTGGCACCTGAACCGAGTTTGCGTCGAAAACAACCGCTTCACCGCCTGCAGGCTCCTCAACCCTCCCGAGCGCTTCGGGAAAGCCAGGTTATCTCGCTGCCTAGACGCAGCTCCCCTGAGTCCCTGCTCGTTTTAAAAAACATTTTGCTAATGCAGAGTGCTAGAGATATTTTGTCCCCAGGATTCAAATATGCATGTCAAGGAGGAAAATGAACTCTATAAAAGTCTTTTTAAAATATCTGTTTGCATCATAAAATACACAGGGCTTCCCTGGTGGCTCAGACAGTAAAGAATCTGCCTGCAATGAGGGAGACCCAGATTCGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGACAGAGGAACCTGGCGGGCTACAGTCCATGGGGTCACAGAGTCAGACACAACTGTGCGACTTCACTTTCACTTTTCAAAATACACAGAACTGAAAACTTTCCATCTTAGCCATTCCCACGTGCCCAGGCCAGTGGCCTGAGGCACATTCACACCCCTGTGCGCGCGTCGCCACCACCCGCCTCAAGGTAACTGTCTCCTCTTCCCTGACCTGTGCTCCGTGCTGTCTCACTGCGCTAGGCGCACCCACAAGCTCACAGCTCTGCAGTCTCCCTGAGTCTTAGATGGTGCGTCTAGCTGCTGAGTGGACATCTACTGGATTGTTCCAAGGCATCTCAGACCCCACCTGTCCCCAGGTGCCCTCTCCCACCACCCCTGGTTCCTCCCAAGCCCACTGCTCTCTTCTGCAAACCAGAAGCCTGGCAGCCGTCAGACTCCTCTCTCCTTCAACCCCAGCCTGACACCGAGTCCTGTTGACTTCACGTCAAAGGTATTTTGAAAAAATTCCATCAGTGTTTCCCTGTCCCAGGGTGAAACGCCAGCTCCTTGGTTTGGTACCGAGCCCTCCAGGACCCCTCCCAGGCCCCTTCTCCTCTGCTCCGCGCTCCTGCTGGGCGCCTAGGGGCTGCCCGATCTCACCCACTGTCTCACAGTCTGGGACTGCCTTGGCTGTCTCGGCTGTCTGGACCACTCTTTGCTTTTCTGCTGAACCCTC TCONS_00135433 TCONS_00135434 r 5' 3897 TCONS_00135433 TCONS_00135434 r 5' 3897 EMBV3_43390 GTGAAATACATAAAACTTCTAACTCCAGCATTGGGACCGTGTTTGCCCAGCCCCCAGCAG Gene BVT0102_042801 + 0 NULL GK000002.2:134176297-134292812 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106975 TCONS_00104190 TCONS_00106977 TCONS_00106979 TCONS_00106978 TCONS_00106971 TCONS_00106974 TCONS_00104194 TCONS_00106972 TCONS_00106973 TCONS_00104191 TCONS_00106976 2 XLOC_062952 XLOC_062314 NonCoding TCONS_00106971 XLOC_062952 NonCoding NonCoding - 2:134191735-134196900 - TSS78629 4247 5 TCONS_00106971_4 100 0.385684012243937 2 0.177962819519752 0.00145983917702648 0.00194926096295932 0.00192123201452031 1.09769451891039e-39 0.00089174446303743 0.000723126872546402 0.00064318268943711 0.000977938714967789 0.000556855002669054 0.000242484635097495 2.06670857554986e-05 4.2094426972386e-06 8.55513793235661e-05 5.10458990620164e-05 6.48628766109927e-05 0 0 0 0.000899247240341132 0.00220593075365127 0.000889570435259069 0 0 0 0.00113073215694284 0.00106260120284312 0.000239486324845068 4.52317456126806e-06 0 0 XR_237776.1 MIIP PREDICTED: Bos taurus migration and invasion inhibitory protein (MIIP), transcript variant X11, misc_RNA. 4e-127 461 87.70 0.0821756534024017 0 noncoding 1 1 1 1 -0.11763505580915 0.470624545435156 -0.00744461141378623 0.901871442116378 GGGAATTCGGCTGGGAAGGCGTCTTCCTGATAGCTCAGGTGCGGAGGCCTCTGAAGGTGGATGATTCAGGGTCAGAAGCGCCTGGGGCTTGTGGATGGTGGGTGGGCTGTGGCGGGATGGCCCCAGTGAGAAAGGCAGCCCCGCTGGTTTCAAGGGACAAGCGAGGAGCCCCTGGGTGCCTGTCTGGGTTCTACAGCGAGCTTCAGAGGGTGGGGGATGAGAGCAACCTGGAGAAGAGGCGCAGAGGTCAAAGGGCCGTGACCTCGCAAGTGCCCTGTTGGCCATGGCAGTCTCCCAGGCCTGGGAACAAGAGATAGCTGCACAGGAAGATCCTTTCAGTTAGAGCGCTGTGTAGCTGAACTTGGCCTCTGATTTAAACTTCAGTTCAGTTCAGTTCAGTCGCTCAGTCATGTCTGACTCTTTGCAGCACGCCAGGCTTCTCTGTCCATCACCAACTCCCAGAGCTGGCTCAAACTCATGTCCATTGAGTGGGCGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCTCTTGCCCTCAATCTTTCCCAGCATCAGGGTCTTTTCAAACAAGTCAGCTCTTCGCATCAGATGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAGTGAAAACTCCGGACTGATCTCCTTTAGGACGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTTACAACACCTCAGTTCAAAAGCATCACATCAATGAAGAGGTCAAAATCTCTGGCAGCAAGTGAGGCTGGATACAAGTGCTCTGCACCTTCTCTCAACCTCTTGCAGGGCTGGTCCCTCTCACCGGCTGGCCCGGCCCTGGCCCAAGGGGGCTCACCTCCATCACTTGGAGTAGAAAGGAGAAAGCCTGTCACTCCCAGCATTCCCAGCTCCAAGTCCTGGGATTCACTCTGATTGGTCCTGCTTTGGTCACATGTTCACCTCTGAGCCAATCCCTGTGGCCAGAGAAACAGAACGCACCAATTGGCTTAGTTTGAATCACGGGCTCCAGTCCTTGGTCCCTGCTCTGCCTGAGGGATCTGTAGTTGCAGCATGTGGGATCTTGTTCCTCGACCAGAGATCGAACCCGGGCCCCTGCACTGGGAGTGTGGAGTCCACCAGGAAGTCCCAGCTCAACTGTTTTTGACAACAGCCACAAGAGGCAGCGAGACAAGGGTTAGGTCCCATTGTGTGAGCTGACATTGACTGAGCCCCTGTTAAAATGTTAGTCACTCAGTCGTGTCCGACTCTTTGTGACCCCATGGACTGCAGCCCCCCGGGCTGCTCTGTCCACAGGATTCTCCAGGCAAGAATACTAAAGTGGGGCGCCATTCCCTTCTCCAAGAGATCTTCCCGACCCAGGGATCAAACCCAGGTCTTCTGCATTACAGGCGGATTCTTTACCATCTGAGCCACCAGGGAGCCCCTGCCCTGCGCTAAATACCTTGTCGACTCATGTCACCCTCAGTACTGAGAGGAGGCAGGCAGGCACTGTTGTTATCCCTGTCTCCGAAGAGAACTCTGCAGAGACTTGGGTAGGTGAGCCCAAGCCACTCAGCTGGACATGGCGAAGCTTCCTCCTGAACCCGTGTCTTCAACTCAAACCATACGAGGAGCAGTTGACGCAACCACAGCTGCTGTTTCTGTGGAAGAATAGACTGTCACCTTCGGCAAGTCCTCAAAGGACAGAATAGGAGAGAAGGAGTGCGTGGGAATTCTGAGGACAGAGCGATGCCAACACCAGGATGCTGCAGGGACACAGATGCTGACTGGACCTGAGAAAGAACACGGTGACACCCAGAGCTGAGACCAAGGGGAGGGCAGCCTGGTGAGGCCGCGTGCGGGCGGAGGCTGGATGGCACCGTGTACCTGGGGTTCCCACACTGCTGGGGGCTGGGCAAACACGGTCCCAATGCTGGAGTTAGAAGTTTTATGTATTTCACTAGCAGACCCCGTCTCCGGCCTCAGCCCTCCCCACCCACTCTCCAGAGAACATCCCTCCACCGTCTTCACCAAACTACCCGAAACTTAGCCGCATACAACCGCCACCTTATTACGCTCAGAGTCTTGTTGGTCAAGAGTGGACAGAGCCCATCGGGGATGCCCTGACCCCGCTCTGTGATGTTTGGGGCCTCAGCTGGGAAAACTCAATGCTGAGTGCCTCTGTGGGTGGGGCTGGAACCATCTGGAGAGGTCTTCGCTCACATGCCTGGTTGCTGATGCGGGCCATCAGCAGGACCTCAGCAGGGCTGTTGGCTGGACCACTTACCCAGGGTCTCTCCAAGCAGATGAGTTTGGGCTTCCTCCCAGCATGGCAGGCGGGTTCAAAGAACAAATATCCTGAGAGAGCAAGGTGGCAAAGCATTTTTATGAACTGACTTTGGAGATCACAGAGTGTCATCCACAAAGCTCCACCGTGTACCTAGGAAGCCCCTCCCGGGCCCAAGGAAGCGGACAGAGACCCCAGCACTGGAGGGGAGGAATGTCAAATCACGTTGAAAGAAGAGCAAGCGAGATTGGAGAGCATGCTATAGCCGTCTTCGGAAAAAAGAAAAAAACCCGCGACACAGGCCCCTTCGGATGGGGTTCCAGCCCTCAGCCTGGATGATGGGGTCCCACTTACGCCTCACTGGTCTCTGCACACGCACTTCCTTGGGACTAGAAAACTCATCCACCATCCCAATCCACGCCCCCCTTTGCCTGGCCCAGCCCTACTTGCCCTCCACGGCTCAGCAGGGACACCACCTCCTCCCAGGAAGCCTGCCCTGAACCCTGCCCCCACCGCAGCCGAGATGGGGCCCCCTTTCGACCACAGCCACATGTGACCTGCTGGGTGCAGCGGCTTCTCTACTCTGCGATCTCTAATAAGAGGGTGGGCCCCACGAGGGCGTGAATGGTGTTCACCACGTGTCTACCACTATCTCCCCAGCACTGGGCCAAATTCCAGCCCCTTTCTGGGTCCTGCTGATGGACAGCCCACAGCCACTTCCCCCGGGAAGCCTTCCCGGGTTGTCCACGTGTGAGGTGTGTCTCCGGCTCTCCCGCAGGCCCCACTGCAGGCGTGTGGGAAGGCTGGGATGAAAGCCCGGCGCTCCGCCCCTGTTCCCAAGCCAGAGCTTGTTATTGCAGTAAAAGAGGCAGCAAATTACCAGACGGGCTGGGAGCTGTAATGATTAAAACAGCGTATTGTTCTTGGGGCTGCTAATTGCATACCTGAGAAATGAGGCCTGCTCAGCCGTGGTGCCAGGCCCAGCCTGGCAGGGAGCCAGACACAGCCAGGCGACAGGGCAGAAGGGGGTGTCCCAGAAGCAGCATGTCCCCAAAGGGAGTGGCTGAGCAGCCTCACTGGGGGGCCCCACTGAAAATACAGATTTCCAGGCCCTGGCTCAGACCCACTAACGCTGTATCTGCGGGGGCAGGCCCAGGACCATGGATTCTTGACAAGCTCCCAAGGTGATTCTGAAGGTCCAAGCCTGGGTTTCTGACTGCCCCACCCCAGAGCCAGATGGAGGCCCGCCTCACTGGCCCAGTTCACCTGGAGAATGAGGCAAGGCTGAGAGAGTGGCTGCGGGGGAGGGCATGGAGAGGGCGGTTTCCCCGGGAACTCGGGTCAGATCTCTTCCACATGAGCTGGGGGACCCGGGGAGGGTCAGCTCGCCCCTCTGAGCACAGGCTGATTTTCCCGGAAGCCAAGGGAGCGTAGGCTCGCAGAGCCCCCCGAGAATCCGAGAGGGAGTTCACCAGGGGGTCCACCCAGCTGGCGTGTGTTGGGCCATTTACAGAAGTAAGATGCTTTGGTCTTCTTAGAGTCTCTCCAAATTGCGTAGGCTTTGGGCTCGCCTAGAATTGCAAGAGCCATCACAGGGTGCTGCGGGGATGGAAGGGGCAGATGTAGATCAAGCTGCAGCCCAGAGCCCGGCCACCAAGCGCTCAGGGAGAGAGCGCCTCCGCGTCCTCACCCGTGAGAGGGCCGTGGGGCCGCGGCTCCCTCCTGACGCCGTGCAAGCGTCCGATGGGTGAATACAGACGAAGCGCCCAGCTCAGCCCCTGGAGCAGGGCAAGTGCTCTGCACGCCTGGCCAGGCGTGACCCGCCGACGAGCAACCGTGGGACCCAGCGAGTGTGTGAGCAAGCGAGCAGGCCAGCTCGCGAGGGACACGTGATGCGTGTGGAACCCTGTTCCCCGGAAACGCACAAAGACGCTGAGACCCCCT TCONS_00104180 TCONS_00104181 TCONS_00104182 TCONS_00104183 TCONS_00104184 TCONS_00104185 TCONS_00104186 TCONS_00104188 TCONS_00104189 r 3' 15365 TCONS_00104180 TCONS_00104181 TCONS_00104182 TCONS_00104183 TCONS_00104184 TCONS_00104185 TCONS_00104186 TCONS_00104188 TCONS_00104189 r 3' 18547 EMBV3_13353 CACTGACTTCTAACTTGGGAAAGGGCCAGTTCTGTTACCAATGAACTGAGCAGCAACAGG Gene BVT0102_293809 + 0 NULL GK000022.2:37439283-37538100 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40830 AAGTTTCTTTGGCCCCACCCTGAACAGCTTCATCCACATCCTCATGTACTCCTACTACGG Gene GeneID:615756|ELOVL2:NM_001083517:5_cdna Constitutive 0 NULL GeneID:615756 23 GENE ELOVL2 MGC140077 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 EMBV3_16603 CTGAAAAAGCCCTGAGCTTCAAGCAGTAAGGACCTAGGTGGGACAGACACTAAAGTTGGT Gene GeneID:528386|MURC:NM_001103264:2_cdna Constitutive 2 NULL GeneID:528386 8 GENE MURC MGC160021 muscle-related coiled-coil protein EMBV3_41739 AATGCTCACCCTAGGAAAGAGGGGAACGGCGGGTCTCTTATATACAACTCATAGGAAGCC Gene BVT0102_276549 + 0 NULL GK000002.2:14601340-14683867 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31765 GATTTCTATGGGGGCAGAATTTGAGGTATGATATATGTTTACCAACTCACGTATGTACAG Gene GeneID:540231|LOC540231:XM_002697174:206_cdna Constitutive 0 NULL GeneID:540231 23 GENE LOC540231 NULL hypothetical LOC540231 EMBV3_08884 CCCAGGGGAAGGAGATGTGTCTGAATTGCTGTCAAGCCAAAAGGGAAGAAGAGAGGCAAC Gene GeneID:514559|TTL:NM_001113233:74_cdna Constitutive 0 NULL GeneID:514559 11 GENE TTL NULL tubulin tyrosine ligase EMBV3_04543 ACCCTATCTTTGCCCAGAATCTCTGTGAAGAGATCATTGAAGAGAAGAAGGAACTGGACA Variant GeneID:790164|SLAMF7:XM_002685861:415_cdna 688^804 1 EMBV3_35863 GeneID:790164 3 GENE SLAMF7 NULL SLAM family member 7 EMBV3_25977 ATCTGGTGCCTGAACCGGGCTAATTACAGCCTCTCCCCAACAGGAAACTGTGGGATTTGA Gene GeneID:281581|YARS:NM_174220:25_cdna Constitutive 0 NULL GeneID:281581 2 GENE YARS MGC139774 tyrosyl-tRNA synthetase EMBV3_24106 TGCTTATAACTTTTTAGAAAAAGCACATATTTTGGAAAGGAGTGTATGACTGAGAATAAA Gene GeneID:511644|TPMT:NM_001075531:74_cdna Constitutive 0 NULL GeneID:511644 23 GENE TPMT MGC139740 thiopurine S-methyltransferase EMBV3_37200 ATGTGGAGCGCACCCGACCTCTGACAAGGAAACATCAGTAGCTTTGAACCTGATCACAAC Gene GeneID:530858|PARK2:XM_002690378:7_cdna Constitutive 0 NULL GeneID:530858 9 GENE PARK2 NULL Parkinson disease (autosomal recessive, juvenile) 2, parkin EMBV3_30437 CCCTCTCTGGAGGATCTGAAAGTGCAGGAGGCAGATAAAGCGGCACTGTGCGGAGCCTTT Variant GeneID:327710|NDUFA8:NM_175826:42_cdna 151^314 1 EMBV3_00836 GeneID:327710 11 GENE NDUFA8 MGC127844 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa EMBV3_30161 TCCATCGCTAGAAAATGGCACGGGAACAAACGATGAAGATGAATTGAGCCTTGGCCTGCC Gene GeneID:540068|FAM134B:NM_001015672:32_cdna Constitutive 0 NULL GeneID:540068 20 GENE FAM134B FLJ20152 family with sequence similarity 134, member B EMBV3_10814 GTCCCTGACTACACCGCCACTCTCTGAGTCTGTCACTTGGATCATTAAGAAGCAGCCTGT Gene GeneID:514494|CA5B:NM_001080908:26_cdna UTR3_Alt 2 NULL GeneID:514494 X GENE CA5B NULL carbonic anhydrase VB, mitochondrial EMBV3_19089 GTCTGGGCTGCTTCAGGAGGTGGTGTCCTTGTGTCACATCACGTCTGCTTTCCAACAAGA Gene GeneID:515939|DENND1B:XM_002694231:166_cdna Constitutive 0 NULL GeneID:515939 16 GENE DENND1B NULL DENN/MADD domain containing 1B EMBV3_06309 CGAGCGATGTCACCCGGTCTGGTTTCACGGTGGTTATTACTGAATGATCTCTGGATTAGC Gene BVT0102_218633 - 1 EMBV3_27444 GK000008.2:44901903-45177228 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30534 ACCAGTTGTTCCTGCTCTGCTTCTCCGCAGGGATTTCCCAGATGACCCAGACGTGCGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15553 CTTTAAGACAAGACGGCGAGTCTCGCGGAGGTTAAAGCATCTACTGCCAATGTAGAACCT Variant GeneID:767930|CENPO:NM_001077003:249_cdna 334^491 2 EMBV3_37177 GeneID:767930 11 GENE CENPO MGC128667 centromere protein O EMBV3_01318 GTAGAAAAAGTACTGGACCACCGTGTCGTGAACGGGAAGGCGGAGTATTTCCTTAAGTGG Gene GeneID:618840|CBX3:XM_002684576:70_cdna Constitutive 0 NULL GeneID:618840 1 GENE CBX3 NULL chromobox homolog 3 (HP1 gamma homolog, Drosophila) EMBV3_40559 AGCAACATGAAGTCCTAATTTATTGCTCCCCGCTGTCTTGCTGCCGTCTGTAGACACTGG Gene GeneID:506074|LOC506074:XM_002695749:452_cdna UTR3_Alt 2 NULL GeneID:506074 19 GENE LOC506074 NULL similar to Chromosome 17 open reading frame 63 EMBV3_14863 TCTTGGCATCCCTGTCCCTGAGCACCTGGTCCTGCACACCACTCACCTCGCTGACCACTT Gene BVT0101_041575 + 1 EMBV3_39229 GK000025.2:996279-1006911 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40783 CTTGGAGATGATGGAGGAAGTCCAGCGCCTACAGGAGAAAATCGAGGCGAGACACCACAG Gene GeneID:541159|LOC541159:XM_002696402:169_cdna Constitutive 0 NULL GeneID:541159 20 GENE LOC541159 NULL similar to Myotubularin-related protein 12 (Phosphatidylinositol-3 phosphate 3-phosphatase adapter subunit) (3-phosphatase adapter protein) (3-PAP) EMBV3_35261 TTTCCAAATCTCCCCAGTCCTCATCTCCTGGCCCCGACCCAAGGCTACGAAACCATATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33025 TCTCAAGTGCACATGGAACATTCTCCAGGAGAGACCATATCTTGAGTCACAGATCAAACC Gene BVV0102_430702 + 1 EMBV3_15032 GK000001.2:104265597-105069156 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00047307 TCONS_00197118 TCONS_00091705 TCONS_00175170 TCONS_00188671 5 XLOC_027443 XLOC_118781 XLOC_056478 XLOC_104953 XLOC_114712 Coding TCONS_00188671 XLOC_114712 Coding Coding - 4:72935981-72938535 - TSS141039 2554 1 TCONS_00188671_7 165 0.999216914643696 1 0 0.000271561519208133 0.000120654587581529 8.33366188004956e-05 0.000299130885732563 2.89968072672215e-05 5.23346081618378e-05 0.000111884781946021 0.000401648478630003 0.000208398143432484 4.02750131231151e-05 2.68894004985283e-06 0.000138369899197405 3.20182162686722e-05 0.000524349491874027 0.000509401134179161 0 0 0 7.58085534034197e-05 0.000101818297529328 1.18861623190121e-06 0 0 0 0.000100147342442058 3.99996969458322e-05 8.75584461927091e-05 6.26806443576317e-07 0 0 XR_236034.1 LOC101902035 PREDICTED: Bos taurus uncharacterized LOC101902035 (LOC101902035), 5e-73 280 72.61 0.198120595144871 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 877 69.31 0.881362568519969 TCONS_00188671_7 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 5e-63 212 82.11 0.739393939393939 1 noncoding CCCCATATGCTTAACAACTGATCTTTCAGCAGAAAGTCTGCAGGCCAGAAGGGAATGGCAGGATATAAAGTACTGAAAGGGAAAAATCTACAACAAAGATAACTACCTGGAAAGGATCTCATTCAAAATTGATAGAGAAATAAAATCTTTTCAGACAAGCAAAAGTTAAGAGAATTCAGTACCACCAAACCAGCTTTACAACAGATGTTAAAGGGACTTATGTAGTCAAGAAATACAAGAGAAGGAAAAAGATCTACAAAATCAACCCCAAGCAGTTAAGAAAATGGCAATAGGAACATATATATCAATAATCACTTTAAATATAAATGAATTAAATGCTCCAACCAAAAGACACAGACTGGCTGAATGGATAAAAAACAAGACCCACATATATGCAAGAAACCCACTTCAGACCTCAAGACACATATAGATTGAAAGTGAGAGGATGGAAAAATATATTCAATGAAAATGGGAAGAAAAAGAAAGCTGGAGTAGCAATACTCGTATCAGACAAAATAGACCTTAAAATAAAGAAAATTACAAGAGATAAGGAAAGACAGTATATAATGATCAAGGGATCAATCCAAAAGGAAGACATAGCAATTGTAAATATTGGTGTACCCAATATAGGAGCACCTCAATACGTAAGACAAACACTAACAGAGATACAAGGAAAAATTAACAGTAACACATGATAGTAGGGGACTTTAACACTCCACTGGCATCAATAGACAGATCATCAAAACAGAAAATTAATAAGGAAACACAAGTCTTAAATGATACATTAGATGAGATGGATCTTATTGATATCTTCAGGACATCCCATCCAAATGCAGAAGAATATACCTTCTTCTCAAGTACACATGGAACATTCTCCAGGATAGACCACATCTTGAGTCACAAATCAAACCTCAGTAAATTTAAGAAAATTGAAATCATATCAAGCATCTTCTCTGACCACAACACTGTGAGACTAGATATCAGTTACAAGAAAAAATTGTAAGAAACACAAACACATGGAGATTAAACAACACATTTCTAAATAACCAACAAGTTACTGAAGAAAAGGGAAATAAAAAAATTTCTAGAAACAAATGACAATGAAAATATGACAATTCAAAACCTATTGGATGCAGCAAAAGCAGTTCTAAGACGGAAGTTTAGAGCAATACAATCCTACCTCAAGAAACAAGAAAAACATCGAATAGACAACCAAACTTTACACCTAAAACAACTGAAAAAAAAAAGAGCCAAAAAAAAACCACCCCCAAAATTAGTAGAAGGAAAGAAAACATAAAGATCTGATCAGAAATAAATGAAAAAGAAATTAAAGAAACAATAGTAAAGATTAATAAAAATAAAAGCTGTTTTTTTTTGAGAAGATAAACAAAGCTGACATTTAGCCAAACTCATCAAGAAAAAAAGAGAGAAGAATCAAATCAACAAAATTAGAAATGAAAAAGGAGCGTTTACAACAGACAATGCAGAAATAAGAGACTATTATGAACAACTATATGACAATAAAATGGATAACCTGGAAGAAATGGATAGATTTTTAGAAACGTTCAATCTTCCAAGACTGAACCAGGAAGAAATAGAAATTATGAACAACCCAATTATAAGCACTGAAATTGAAGCTGTGATCAAAAATCTCCCCAAAAACAAAAGCCCAGGACCAGATGGCTTCACAAGAGAATTCTATCATTTAGAAAACAGCTAATGCTTAGCCTTCTAAAACTATTTCAAAAAATTGCAGAGGAAGGAACACTTCCAAACTCATTCTATGAGGCCACCAACTCCCTGACACCAAAACCAGACAAAGACAACACACACAAAAAGAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAAAATCCTCAATAAAATTCTAGCAAATAGAATCCAGCAACATAGTAAAAAGATCATACATCATGACCAAGTGGGCTTTATTCCAGGGATGCAAGGATTCTTCAATATTCACAAATCAATCAATGTGATACACCACATTAACAAATTGAAAGATAAAAACCATATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACATCCATTTATGATAAAAACCCTCCAAAAAGCAGGCATAGAAGGAACATACCTCAACATAATAAAAGCCATATATGACAAACCCACAGCAAACATTATCCTCAATGGTGACAAATTGAAAGCCTTTCCCCTAAAGTCAGGAACAAGGGTGCCCACTCTCATCTCTACTATTCAACATACTTTTGGAAGTTTCAGCCACAGCAGTCAGAGAAGAAAAAGAAATAAAAGGAATCCATATTGTAAAAGAGGAAGTAAAACTCTTACTGTTTGTAAATGACATGATCCTCTACATAGAAAACCCAAAAGACATCACCAGAAAATTACTAGAGCTGATCAATGAATTTAGTAAAGCTGCAGGATGTAACATCAACACAAAAATCCCTTGCATTCCTATACACTAACAATGAGAAAAGGGAAAGAGAAATTAAGGAAACAATTCCATTCATCATTGCAACGCAAAGAATAAAATAG TCONS_00184551 . 5' 73945 TCONS_00184551 . 5' 73945 EMBV3_41643 TTCGTCCAGCACAGTCCCTACTTGATAAAGTTGGACGTGGAGCTAGGCCGGACTACATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29783 CTGCATTTGACAGCAAGAATCAAATTCCCTTCAGCGTGCCTTTGTCAGCAATACATGACC Gene BVV0102_432554 + 0 NULL GK000011.2:44570849-44577632 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18504 GAAGCTGCGTCTTGCAAACCACTAAGAAGTCGTGTCTGAACAAGGAGTGAAGGCCTCGAG Gene GeneID:512184|CDADC1:XM_002691785:396_cdna Constitutive 1 NULL GeneID:512184 12 GENE CDADC1 NULL cytidine and dCMP deaminase domain containing 1 EMBV3_07865 TCCACCTGTGGCTGGAAGAGATGCCTTGTGTGGGCAGTTGCCAGTTGCTGTTCAATAAGT Gene GeneID:509368|TAAR5:XM_002690252:83_cdna Constitutive 0 NULL GeneID:509368 9 GENE TAAR5 NULL trace amine associated receptor 5 EMBV3_21996 TGATGACATCCCAAATAAAGCACGTGTTAGACTGCTGACGCGGGTGATGCGAACTGGAGT Gene BVT0102_206807 + 0 NULL GK000019.2:49068570-49116812 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097475 TCONS_00097476 1 XLOC_058259 NonCoding TCONS_00097475 XLOC_058259 NonCoding NonCoding TEX2 19:49114647-49119187 j TSS72216 3835 2 TCONS_00097475_10 119 0.275358539765319 2 0.155540868032606 1.2278222262094e-05 1.39826244041505e-05 2.50018454835134e-10 7.22393411374825e-05 2.03458879242797e-05 6.42009824731883e-06 1.61264114307054e-05 9.6109323038454e-05 2.43277125057787e-05 0.000158662951856187 2.93274057904571e-07 0.000222502095954161 0.000157147748177642 0.000272206983638374 6.12770001017868e-05 0.00847944900433205 0.00185500244526982 0.00124079235495166 6.66718853344903e-06 2.02475560034109e-05 2.8455310892351e-06 0.000348697244435704 0.00115889607753399 5.39743092678216e-07 5.91991415961237e-12 1.12705278115697e-11 6.24465328183038e-12 2.16673724769228e-07 0.000118291537914333 0.000958044712221128 NM_001101970.1 TEX2 Bos taurus testis expressed 2 (TEX2), mRNA. 0.0 2929 99.82 0.42529335071708 NM_018469.3 TEX2 Homo sapiens testis expressed 2 (TEX2), mRNA. 0.0 1164 75.19 0.426597131681877 0 noncoding 0 0 0 0 -0.0117080432079209 0.948154639176068 0.0609122359039131 0.416759930820547 CCTGTAGTTCTTTTTCTTTTTCCTACGTGAGGAATTTGGAAAGTTTTTGTCATGCCAAACATGGATGATGTTTATATCCCCATCATGCACTCGGCCATGGATCCTCGCTCCACGTCCAGCCTCCTGAAAGACCCACCTGTGGAGGCCCCTGATCAGCTGTGATGGGTGCAGTCCTGGTGTTCCCAGTAGTGGGAGATAAGCTCAGTGTGGGGTTCTCGGCTGCCATCTGGGCTGCAGCGCTGGCCTTTCCTTGTGCCACCGCTCTGCCCTCTGCCTGCCGGTGCCGGTCCCACCCTGAGGTGTCCCGAGACTGGGGTCCAGATTGCCTGCTGCAAAGCTTTGCCTCAGCAAAGGAAAACTGGAAGGATCATCCCGGTGGATCCAGAGGTTACTGGTGACTCCCACCCTGGCTTTTCTGAGCCTACCAGGTTTTGTTGTACCACAAGAGCACATTAAGAGCCAAGCTGCACAGCTGGAAGGCTTCCCTTTGCCTCCTCGATGCCTCCAGGGTCTTTGCTCAGCCAGCCAGCGCAGTGGAACGTTTTCTTGCTTCCCCAGTTCGTGTGTGGCAGCCCCAGAGGACATCAGTGTGGTTCCATGTGTGGAGGGTGGGGAGTGGGATTTTGTGAGCTGTGTCTTTGGTGATAAAAGAGGTGTGCATGGCAACTTATTGTGTTTTGGAAGCAAGTAGCCATAGAACATACAACTCTTAACACACTACCAGCTGGGGTGAGAATGGTGGGATTTATGTGTACATTAGGCAAAGCCATGAGATCAAACCATCCCATGCCTTCTACCAACAAGGTACAATCACCTGGTTTCTAACTGATCCCGTTTTCCTGAGACCTGAGCATATGTGAAAATGTCAAACACTGCGCAAGACTGGATTGGAGTGCGGCCAGGAAGCCAGAGCCACCGTCCATCCACCTGGCGCTTCCTCTGTGCTCTGGGAAGCTTTAAATAGGCATAAATGCCTTGTTAACCTAATTGGCTAGGGATGTTTTGTGGGCAGTTTCCTTTTCTGATGGCCAAAACAGGACTGCTCTCTTATCATCTTGAGTCAAGACCAAAAGTTCGCTCAACATCAAACACTACAGATCTCAAAATGAACGTGACATTTAACATTGCCAATTTTATTTTGTGCACTTGTGTCAGAATGTTTAGTTTACAAGTTTCAGGGCTCTCTCAACTGTATAATTTGCTTTGAGAAGTACACTCAAAATACAAATTTTTAATTGTTTAAAGCTGCATTCAACATCAGACTTACCTTGGGTGACTTTTGACAATTACATCTGTGGACAAAGCTAATAGTGTTTTTTTTAAACAGCAGCAGCACCTTGCCTGAACATGACTTTAAAGAAATTAATATATTGAAAGAATATATTTGAACCCTTATTTGATTACTTTAATTGCACCATTAAAACATTTGACTTAAATTATTGGACCATTCCAGTTGGTGTGCTGTTCTCATCGTGTAGGCCGATTTGCCTGTCAGTCCGCATGTCTTCTTCACTGGTCTTATAATTTTTGTGCAATAATTTAAGGCAAAGGACTAGATGCACTATTGTGTAAAGAGATTACACGACTGTACCTTATTGCACTTAATCAAATAGTATGTGGGGGATTTACAATCGCTTGCATTGTTTCACAAATAAATATCTCATGTCAAATACTAGATAAGCATCCAAGTTATTTCTCCTTAATCCTGTTCAGGTAACGAACAGAATAAACTATGGCACTGAATCTGAGCCGTCAGCTGCCAGTGGCAGCTTCAGTTTCTTGAGTGATCACTGGACTTGTTCGAGGATCCAACAGAGACCACACCTTGGTACGCGCTATGTCCTTTGGTCCTGTCTGACTCTGCAACCCTATGGACTGCAGCCTGCCAGGCTCCTCTGTCCATGGAATTCTCCAGGGTGGAATACTGGAGTGGGTTGCCATGCCTTCTTCCTCCAGGGGATCTTGCTGATCCAGGGATCGAACCTGCATCTTAGATCTCCTTCACTGGCTGGTAGACTCTGCACTAGCACTACCTGCAAAGCCCTCGTAGGCTGAGTTCACACCAACCGCCTACTAACTTGGAGCCACCTCCATTATTAAGCAACAAAGCCGTTAAGACACGGCACTCGTGCATACTTGCCTTTCAACACCTGCCACCTTGTCCTCGGAACTGATGCACATTTCAGCTAAGCTTTGGAGCCCATTGTCATCTGTGTTTTAACTGCAAATTGGCACTTGCCATATACCTCTCCAAGGATTAAATCCTGTGTTGCTGCAGCTGGTGACCTTCAACACCCACCCCCAAAAGTGGAGAGCAGTAATAAAGCACTCTGTGCTCCAGGCAGGGACTGGCAGACAGGTCTTCAGATACATTTTCAGGAGCTGAGTTCAACTTTCTCCCTTCATATCCACAAAAACACTGAAAACCTCATGGTGACAACTATCCCTGTGACTAGCAAAAGCTTTACGAGACTAACAAAACTAGAGAAATACGTGCTCAATTGCATGCATCCCCTCACCAAAATCTCTTTTGTACTGTCTTGCTTCTTTGGAGCAGTTCTCAGAGCTGTTTCCTGGGCTGCAGCTCTTACTTTGCCCCAAATACTACTTCACTTCAGTCCCCCAGTCATCTCTTTGCCACCAGAGGACTGCAGCACGCCAGGCTTTCCTGTCCATCACCAACCCCGAGAGCTTGCTCAAACTCGTGTCCATCCAGTGGATGATAAAACTCAACTCTCCCTTTGTACACGTTTTTAAAACACCCAGAATGCGGATTACACCTGCAAGTAGGTGTCTATGTTGTGCCCTGCGGCAAAATACCTTGGTACTGTGAGCTGTTCACACTGTCTGGGGCATACTCTGTAAGTCAAAGAAAGTGAAGTCGCTCAGACGGGTCCGACTCTTTGCACCCTCATGGACCGTAGCTACCAGGCTCCTTCCTCTATGGGGTTTTCCAGGCAAGAGTACTGGAGTAGGCTGCCATTTCCTTCTCCAGGGGAATCTTCCCAACCCAGAGATCAAACCTGTATTTCCTGTATTGCAGACAGACGCTTTACCGTCTGAGCCACCAGGGAAGCCTATTTTAAGGTAGTCCGCGAATACCCCTTATCAAAGTTAGTAAGCTCATGAAGCCCAAGACCGGGAGGCAATTCCAGTGGAGTACACCACGGCCCTTGAACCGTTCAAGGCCACAGCCTATTTCTCATCTCCTCTCCCTGCAGATGGCCATCCACACGGCGGTTAAATGAACCGGCGCGTCTCACAGGTCCCCATGAAAGTGACACTCGGACTCAGGGAAGTCACAAGAAATAAGCAGACTACAGGACCCCCGACGTCTTCCCCAGGCCTCTGTATACCCCGCCCCGGCAGCCCAGGGCGGCCGTGTCGCTCGCGGTTAAAAGGGCCGCCGCCGCGGGGGCAGACGACCCCAGTTATGCGCGAGCACGTGCTCTGGCGCTGCAGCCTGACCCCCGGCGCCACGCGCAGGCGCGGCGGGGGCTCAAAGGCAGCGCGTCGCGACAAACAACACAGAACACTAGCACTGGGATCAAACCATTTTATTGAGGGGCTTCGGGGGAAGATCGAAAAGCTGGGAGGACAATGACATCCGACGTCCTTCTCGAGCCATCTGCAAGAACAAGAGCTGTGGGTGAGGAGTGCGATGTGCCCGCAAGCCCGTCTATTCCCAGCCGCCGAGGCAGCCCGACTCAGACTCCAGTTCGCATCACCCGCGTCAGCAGTCTAACACGTGCTTTATTTGGGATGTCATCACCGCAGGCCGCCCTCCCTCCACCCGACTCCCAGGCCCCCGACACAAATCAAACACCACCTCACC EMBV3_34729 CTTTGGGTCAGACTCGAGGTAGTGGAGGGCTGCTGTTTAGAGGGTCTGGTCCTTTCTTTT Gene GeneID:615215|MAPKAPK3:NM_001034779:289_cdna Constitutive 0 NULL GeneID:615215 22 GENE MAPKAPK3 MGC127030 mitogen-activated protein kinase-activated protein kinase 3 EMBV3_01467 AGATTGTCGGAGATGCTTCTGGACCTCGTGTTCCTGGAGGACTTCCTGAAGGAGGTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32917 TGAGAGGAAAATGCGGGGATCGTGACTCTAGGAGGAATTGGAGGCTCTGAAGCACTCAGA Gene GeneID:507577|EAF1:XM_002685188:69_cdna Constitutive 0 NULL GeneID:507577 1 GENE EAF1 NULL ELL associated factor 1 EMBV3_03353 CACAACTGAAAACAAATTCTGAGGGGGCTATATTAAATGTTGAGGATGCCGCCACTCGGC Gene GeneID:540145|FBXO43:XM_002692799:99_cdna Constitutive 0 NULL GeneID:540145 14 GENE FBXO43 NULL F-box protein 43 EMBV3_21929 CCCACCGTGCAACGGGGCATCGTCAAGATGCCCTGGGCATTTCCTGCTCGAGAGTTCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17080 TGAGAGGCTGCCATACTCCTAGTCAACTAAAAAGTCTCTGGACGTTGGCCGCGTGGTTCT Gene GeneID:404121|DERL1:NM_205789:14_cdna Constitutive 1 NULL GeneID:404121 14 GENE DERL1 MGC137834 Der1-like domain family, member 1 EMBV3_30432 AGCTGGGATTAGTGCGGCATACAGTGTGAGACAAGCGAAGCTGAAAATGTTAGCAAGGGG Gene BVT0102_397599 + 1 EMBV3_27068 GK000003.2:94575371-94580544 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179346 1 XLOC_109119 NonCoding TCONS_00179346 XLOC_109119 NonCoding NonCoding - 3:94578815-94579721 - TSS134105 906 1 TCONS_00179346_1 97 0.131346578366446 1 0 0 0 0 9.1657320997275e-06 0.000147134486765704 0 0 0 0 0 0 0 0 0 0 5.83037567358749e-05 0.000109948997130025 2.7694153703437e-05 0 0 0 4.09529597366793e-05 0.00134674158384054 1.85040213252925e-05 0 0 0 1.06017458845958e-05 0 0 XM_588670.6 CC2D1B PREDICTED: Bos taurus coiled-coil and C2 domain containing 1B (CC2D1B), mRNA. 9e-33 145 100.00 0.08719646799117 NM_032449.2 CC2D1B Homo sapiens coiled-coil and C2 domain containing 1B (CC2D1B), 3e-20 104 77.54 0.15121412803532 0 noncoding TCACGTGTTAGGGCGCGAGGCGTCTCCCGCCGGGGCGCTTCCTGTCACGGCTGCCTCGGCGGCCCGGGGGCCGCGGGAGGCCTGGGCGGTACCGGGAGGGAGAAGGCCCGGGTCGGTATCGGATCCGCCGCGAGGTATGCCGCGAACCCGCCCTCTGGCGAGGGAAGAGGAGGGGACGGCGGGGGAGATGGAGGCGGCCGGGCAGGGCTGGGCAGGGCGGCGCGTCCTGCCGCGGGAGTGGGGTTCCCGGCTTCGCCTCCCCTGCGCACTCCCTGCCCTCCTCTCTCCAGAGCCTGCGTCTGGGTCCAGCACCACTGCTCCCAGTCGGGTGCCCCCGGAGCCGCAGACTTGGCGGGTCTCGCCGACCCACTCACTTCGTGTCCCCCGTTCAGTTGACCACCCGCCGTACACCCAAGCCACTGAAATCTGATGCCTTGGAGTCACTCTGAGCGCCTCCTCCAGTGCGCGCACAGCCAGTTAATCTCCGAGTCCTGCTGGTGGTACCCCTCTAACTGTGGAGTCGGTCCACTTCTCTCCCTCCCCAACACGGCCCCCACGGTCCCTCAGCCTCTCCCCTTTTCGCCGGGACCGATTCACGATCCTCGGTGTTGAGACGGCTTCCAGCCTGCGTCCTCCCTCCTTCCGTCCTTTCTGCAGCCAGGGGGCATGTTTCTGAATCGCCGACTTCATCCCCTCAAGTCCTTTGCCTTCAGAACCGTGCCCAAACTGCTTTAGGCTTCAGAGTTTTTCTCATTTGCCCCTTGCTAACCTTTTCAGCTTCGCTTGTCTCACACTGTATGCCGCACTAATCCCAGCTTAGTTTCCCTGTGCAAGTCAAGCTATTGTCACCTCAGAACCATTATCAGGTTGTTCCCTATGTTTGGAATCCTATTCCCCTTCCTCCCC TCONS_00170762 . 5' 809 TCONS_00170762 . 5' 809 EMBV3_11247 TGGCAGGCCTCACCTTAAAAAAGAGTGAGCAGACAACAGCTAAAGGACTGAAGAGTGAGG Gene GeneID:281363|NT5E:NM_174129:5_cdna Constitutive 0 NULL GeneID:281363 9 GENE NT5E NULL 5'-nucleotidase, ecto (CD73) EMBV3_27832 AGCCTCTAAAGCAGCCTCTAAACAGAGGGAGATGCTCATGGAAGATGTGGGCAGTGAGGA Gene GeneID:784087|LOC784087:XR_083845:80_cdna Constitutive 0 NULL GeneID:784087 14 PSEUDO LOC784087 NULL similar to Nuclear casein kinase and cyclin-dependent kinase substrate 1 EMBV3_16692 AAAGGAGAGGGCAGGTTGAATCATAGGAAATGAAAGCTGTGTACAAGTAAAGGATTTCTG Gene BVV0101_003660 + 1 EMBV3_12636 GK000003.2:15353405-15355685 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00877 TGTCCATACCTCGAGCTTGTCGATCCATGAGATGGACGAGGGGCTTCTGTCCTCAATTAA Gene GeneID:613527|CTNS:NM_001102264:165_cdna Constitutive 3 NULL GeneID:613527 19 GENE CTNS MGC166375 cystinosis, nephropathic EMBV3_00269 ACGTCAGGCCCTCGGGCGAGGGGTAAAGTCTGCGCATTTTTCCTCCTTCCCAAGGCGACT Gene BVV0102_035006 + 0 NULL GK000013.2:38220660-38259751 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045115 1 XLOC_026351 NonCoding TCONS_00045115 XLOC_026351 NonCoding NonCoding - 13:38257501-38259126 - TSS32998 1625 3 TCONS_00045115_1 56 0.265846153846154 1 0 0.000159081876138989 5.56527954586532e-05 9.68109642165576e-05 7.15434045014371e-05 0.000185333543167972 2.20126294390609e-06 0.000143549418448821 0 0.000150519462234761 0 0 0 0 0 0 3.25065832029982e-05 0 0 8.82576985277802e-06 1.77019811194383e-05 3.73628054488506e-06 4.56655733010937e-06 0 0.000165067111950296 2.55819955107364e-05 0 0 5.91087367666133e-06 0 0 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 3e-54 217 76.06 0.195076923076923 0 noncoding GGGAGGGTCCGCTGGAGCCCGGCGCCGGCCTCATGGGGGGCGCGTCCCGCATTTTTTTACCTACTTTGGTGCGATTCCCGCCAGCCTCCAATGATTGGCCCAGCCCCGGCACGTCAGGCCCTCGGGCGAGGGGTAAAGTTTGCGCATTTTTCCTCCTTCCCAAGGCGACTGTGGCAGCCCTGAGTTCTCTGAGTCACCGCTAATTTCAGGTCTGGAAAAAAAAAAAAAACAAGGAGCGATTTATTTATCTTCGAGAACAGCGCGGGGAAGGAAGGCCTTGCAGCCCGCAGGGTGCGGCTGGAAACGGCCTGCTCGCCTAGGGAGGGTGGCGCCGGCCCCGCTGCCCGGCTTTGGGGGTTTTTTAATTTGGGATTCCGTTTGTTTCATGGGCAGTTGCATCAGAAACACACTTTTCAGAGGGCCAGAAGGAATCCCAGCGTTTTTTTCAGAGGGCGTTTCAATGGAGGATAAAGGGAACAGAGAATTTACAACCTGCATGATGACGTTTTACTTAATTTAGGCTCCCCAGAGCATAACGCACCTATCCTATGTGCTTTGTGCTCAGTCGCCACCGACTGTTTGCGACCCCATGGGCTGTAGCCCAATAGCTTCTTCTATCCATGGGATTTTCCAGGCAAAAATACTGGAAGGGGTAGCCATTGCCATCTCCAGGGGATCCTCCTGACCTAGGGATTGAACCCAGGTCTCCTGCGTTGCAGGCGTATTCTTCACCATCTAAGCCACCAGGGAAGCTATGTGCTTTGCTATGCTTAGTCGCTCAGCCATGCCATTACCAACCCAGGGATCAAACCCGCACGTCTTGCATTGGCAGGCAGATTCTTTATTATTGAGCCACAAGAGAAGCCCCAGCAGGCCTCTACCAGAACTATTTTAATTCTCCCAATGTTAGGTTTTTGGACGAGATAATCAATACGCTTTTTGTTTTCCTGGGCACTATATAAGGTCTAGATAATATGTAGCTTTTTATTCTGCCCATTTGGCATAGAAACCCATTTCTCATTACTGTTCTGTTTTTTTGTTTGGTTTTGTTTTTAAGGAAAAGTTTTTAAAAGTGGCAATTTTTAAGCCTTAGCAGCTACTGCAGAATTTTTGGCAGGTTAGAGCAGTGGGTTTCAACGTGAAAGAGAACTTAAAATCAGATTTGTGTGCCCTATCCCAGAGTTTCTTGATAGTATATCTCAGGTGAGACCCAGGAATTTCTAAGGATTCTTGGGTGATGCTGATGTGGCTGTTGGGTATTAGCACTTTGAGAGGAAAGAACCCACCTGTATCCACCTGAAACTGGAACCTGTGTCTGGAACCCTGTTGGCCTGGGACTTGGAGTCACCCTCCACCTCTGAGTCCTCGAAGACTTCCTTTCTAGTCCCAAACTGAATCGTGTTCATTTAAGGACACAAGTCAGGCCTGCTCCGGCCTCTCTTATGTCTTTTGTCCTCCACGCTGCCACCAGAGTTCCGTCCAGAAATAAGAATTTGATCCTGTTTCTTTAATGCTTAAAATTTTCTGTGACTTCCTCCAGAAATCTCAGCAGGTCAGTCCGGCCCTCCTGCCTCTGGCCTCAGCCTACCTTTTCTGTCCTGTCTTCCACATTTTGCAAATTTCCC TCONS_00042620 r 5' 576 TCONS_00042620 r 5' 576 EMBV3_14146 TTTGGCCAGAGCCAGACTTTGCAGACAGATTACATCACATACATGGACGAACTGGGCTCC Gene GeneID:517828|LOC517828:XM_002694016:147_cdna Constitutive 0 NULL GeneID:517828 16 GENE LOC517828 NULL similar to Putative dimethylaniline monooxygenase [N-oxide-forming] 6 (Flavin-containing monooxygenase 6) (FMO 6) (Dimethylaniline oxidase 6) EMBV3_42979 AGCCTGTCTGCGAGCAAACAACCATTGACGTTTATGAGCCACCCTCATCACAGTACTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35285 GTGGCTCAGTATCCTCTATATACCCAGAACTCTTCTGACAACTCTGTTCCCACTGTGGCT Gene BVT0102_290243 - 1 EMBV3_33853 GK000007.2:98878165-98896054 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214704 TCONS_00214701 TCONS_00218160 2 XLOC_130750 XLOC_131636 Coding TCONS_00218160 XLOC_131636 NonCoding NonCoding LNPEP 7:98877971-98892723 x TSS162262 3437 3 TCONS_00218160_3 69 0.0258946755891766 4 0.767270015592163 0.00108858185173336 0.00174257398056111 0.00126045438653855 0.000454232709563182 0.000834458701864489 0.000378110853216866 0.0010512992836002 0.00101329581104204 0.00129063503995949 9.67155631728564e-05 3.29281491315081e-05 2.07067485155775e-05 9.29823965765018e-05 0.00048939279637702 0.000424534464740469 1.26770730352898e-113 0 2.97464612600785e-87 0.000938459365315212 0.00127995722474871 0.000379727304138384 5.67555027933428e-89 0 5.98742022896377e-131 0.00124767149874366 0.000968566134909016 0.000936389129577712 9.87777915405995e-163 2.48320377637577e-196 1.9944934725728e-110 XM_599899.4 LNPEP PREDICTED: Bos taurus leucyl/cystinyl aminopeptidase (LNPEP), 0.0 5770 100.00 0.930462612743672 NM_175920.3 LNPEP Homo sapiens leucyl/cystinyl aminopeptidase (LNPEP), transcript 0.0 838 78.64 0.279022403258656 0 noncoding GTTCTCTTGAAAACTGAAGTTAAAGAAAGCCTTTATGTTTTGACCTGCAACAAGTTGGTAATTGTTATCTTCATTTACAAAAGAAGGCAGCACCCTGTGACGTGTGGGATCTTAGTTCCCTAACCAGGGATTGAACCCGTGGCTCTGTATTGGAGGTGCAGTCTGAAGTGCTGGGCCAGCAGTGTTCAGAAAGGATTCTGTTCTGCACCCAGGAAGACTGATGTGGCTCAGTATCCTCTATATACCCAGAACTCTTCTGACAGCTCTGTTCCCACTGTGGCTAAAGTACATGTGAAAACATGAATGGTGAAGAACATTAGTGTAAAGAGGAACCTGTGACAGTAAGAACCTCTATATACCCAGAACTCTTCTGACAGCTCTGTTCCCACTGTGGCTAAAGTACATGTGAAAACATGAATGGTGAAGAACATTAGTGTAAAGAGGAACCTGTGACAGTAAGAAAGTTCGTGAACACCAAAACAGTGGCAAACAACATAATTCCACTTAAAGAGATTCATATCGAACAAGATGGAGCAAGGCACAAGCTTACGGTAGCTGCTGACACTACTTCCGTTTAATATATCTAATCAGTTGGTATTAACAAGTGATTAGATATCAACAAACTGAACTCCTTGGATTTCTAGTTTTGTAGCCTTTCAGACTTCCAAAGCCTAAGCTTTTCTTCTACAGTTCCAGATTTCCAATTTTGCCTTTCCTAATAATATGGTATGATGTGTCTTTTTATTAATTCAAGACGACTCTCTCTCTGCAATGAATATAACGCTTGTCAGACAGTACTGAATTGGTCATGGATCTGTGTGCTCATAGAACAAAGAATCGCTGTGCTTCTATCTGAGTTCTCAGAAATACAATGGTGAAATAAAATTCTGGGGGAAAAAACTTCAAACGCTTCAACAACACTTATTATACTACACGGTCTAACCATTATTTAACCTTATATTCCTGACTTAGAGTTGGTTTTTGGAAGCCCTATATAGATGGGATAGCATAACATTAAAAAAGTATGGAATTTCACAGGAAAATCTGAGGTGAGGCCTGTAAATGAAAAATACAATTGGTACGGATCTGGTATTATGGGAATGAATGGCTTTTGAGTACAAAGATAGAAATGGATTTTGACTTACCTCCTTTTTAGCCCATGTTTTGATAAAAGTTTAATTATAACAACCCCCACCCCGTTCCAGACACACACACTCACAGGAAAGAATGATATAATTCAAGACAAGATTTGCCATATGCGGAGCTAACAAATATTATAGAAACAATGTGAAGATGGGCAGACAAAACGAAGAATCTTAAATGATTTTGAGAAGTAGCAAAGTTTAAACTCTGTATCAAAGTGGACTTTAGTAATATGGTTTAAAAAAAAACAACCCAGCAACAAAAAATCCTCCAAAATTTTAGTATTTTTCCCCACTCTAAAAATATAAAAACTCACTTTCAAATATCGACTAAATTATCATTCATTTACTGAAGCACAAGAGTAATAAAGACCTACAATCACCCTAGTTTCAAAAAAACATCTTCAGATGATTCTGTGATTCTCAGATAATAGTATTTTCTACTCTAAATAGAGAGATAAGTGCTGTTTAGAAAACACTAAATTGGGAGAAAACACACTAGGGCTAAAGAAGGTTATCTTTAGTTTCTATTGCCAGTCTTTTCAATTTTGCTATATAAAAATATTTTCATAAAATAAAATATAATTTTATACATAATTCCATATATTCTCACTTGATACCTGCTGAATAAAAAAAAGGTGACCTTTCCCATTGTCTGATTCAGTGGAGTGTTTTAAGTGCTGAAAAATGGGTAAATACCCTTTTTATGTACGTAGGTGTTTTCAAGCAAAATAGAAAGTACAATAAATACTAGGAAGAAAGCTTTTATCCTAAGAATCAAAGAAACACAACAATCTAGGTATAAGTCTGCATAGCTCAAAAAATTCAAGTACAGTATTTCCCCTTTAGAAGGAGTACAATTGCCATATAGTTTTGGATTCTTTCTTTCCTTGGCCATTCCCTATAATCTGTTAGTTTGGCCATTACAAAAGAAAACTTTGATTTTTCAACTAAAGAAAAGTACTGTTTCTGACAGTAGAAAAAATTCAAAGCCCACCATATTAAAATAAACCTAAATCAAGTTATTCCTATCCACATTCTCTTTATTCCTTTAAGGTATTATGGTGAACTTCAAATAAAAATGTTCAATTTCTCAAAGGCCCTATTTTAAAATATACTTCTAATATGCAACTCTATCATATAAAATGAAAAACCACCCAATGGGTATGATTAAGAGAAAGTGTCTGATCTATCAGCCAAAAAGCAACTTAAATAGACTGTAAACTGTAAATCTTAGTAAGAAAGTCATGATAAGAGACACCAGTATTTAAAAAAATGCCATAAATGCAGAAATACTTATTTGTAACACAAGGGATATCTACGGCAGAGAGCGGTAAAGGTGTACAGAGATTTGGAGAATACTGGAATTCATAAGTAAAATAATTAGTGCTAACTCAGTTGGAAATATTTTCCTGAAAGATGAAAAAGAAGGTGTTAAATATTTGGAAAGTTTAATCTTTTGGCCTTGTTATTTAGCTTTACAACAAAAATTTAAAAATTCTGTAGCACCTCACTATTTTTCAGAAAAAAATATAATAGTTATAAACTTTTTCCAGAAAAAAAAGGATTATTCAAAACCCCCAATAAGTAGATCTGCACACCTGAGGTCAGTTCTCTACAGCTGCATGATTCGATGACTTCATTACTATACTTTTTGATGCTAACTTGGAACCACATTCAAATAACATCTATCAACAAGAAGCAACAAATGGCTAACCAACCAGCAGCCTGCAAAGATGGTGGCTCCCATGGTAGCTCTTTCCTTATTTCATGGTGTCAACATTTAGCCAGAAACTGAGAACAGCATTGCAAAACAGATTTTTTTTTCCCATTTGAATATCTTCAAAGTAGAAAAATTACCCACTGTTTTTGTAGACGGTTGGCATACAGGTGAATATAGTTTGGTAATAAATAACTACACACTGCCCAAAGACATTTCAGAAAAGACAGATGAAAAAATACAGACTGGCCCTGAGCAAACTAGAACTCCTAAGAGTGCACACAACTCAGCAGCGATCCTGGTTTCACCGTGGCTTTTGCAAAAGCAGCAGAGGCCCAGTTAACAAGCTCTCTGAACGGGTGATGAGGTACAGGTGTGCATGCTACAGCCAATATGTCAGGGTTTTCAGATTCTTCTCCACCCACTGCATGTTCAACTGAATGACTTCCAAAGCCTCCTGGACACAGCGAAGTCGAAAGGTGGCCTCTGACTGGTTTTCAAAGAATGCCTGGACCTGTAGTTGCACACAGAAGTATTTCAAAAGAAAAGAAAGGCATACCGCAGCTTTGAATATC TCONS_00214707 r 5' 0 TCONS_00214707 r 5' 0 EMBV3_05708 TGATGGACAGGGACCACAGGAGGTGGCAAGGTGGTGAGAGGAGTATGTCTGGTCACATGA Gene GeneID:539785|SAFB:NM_001099715:81_cdna Constitutive 0 NULL GeneID:539785 7 GENE SAFB NULL scaffold attachment factor B EMBV3_39415 GTTCATTAACTCTTTAGGCCCCTGTGCACTGTGATCCACTAGTAAACTTAGGTTTCTGAG Gene GeneID:505251|ELF1:NM_001077853:38_cdna UTR3_Alt 2 NULL GeneID:505251 12 GENE ELF1 MGC139879 E74-like factor 1 (ets domain transcription factor) EMBV3_37410 GCTGTAGAGAGGCGCTTTGCCGCTGAGAAACTTGGCTAGAAGAGGAAACAGCAGATCTTC Gene BVT0102_201698 + 0 NULL GK000023.2:49639400-49809610 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138219 1 XLOC_084427 NonCoding TCONS_00138219 XLOC_084427 NonCoding NonCoding - 23:49688504-49692776 - TSS103509 4272 3 TCONS_00138219_3 140 0.426966292134831 1 0 0.00134591981063484 0.00159374531279404 0.0012649155738565 0.00115282749666583 0.00129532812960291 0.000926351501923713 0.00111317327117385 0.00137387924203751 0.00252329393942791 0.000113649404257768 4.82272335374115e-05 5.18942567758146e-05 0.000278980471505619 0.000804920122394128 0.000414592101588235 0.000105102477399455 0 0 0.00198010055420534 0.00115712687774914 0.000578081521814254 0 0 0 0.00133963601337213 0.0023430494905356 0.00154776907677264 8.99360867013557e-06 7.16920374041554e-06 3.01996040936714e-06 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1058 92.76 0.167837078651685 0 noncoding 0 0 0 0 TCTGGATGGAGTTAGAGGGAAGGCGGCAGAAAGGGGAGTCAGGGAGATTCAAGTCCCGGGAGGGATTCAGGGCTCCTTTGCTGGTTCTGAGAAGTCAGAGTCTTGTGCCAGGATTCCAGGGAGGCCTCTGGGAGCTAAGGGTGCCCCCAACTGACAGCCAGCAACAGAGCAGGGCCCCCACTTGCACAATCACCTGGCCAGCAGCCTGAGCGAGCTTGGCCGCAGACTCTCCGCTCAGAGCCCTGGTCAGGACTGCAGCCTTGCTGATTCCAGCCCGCAGCCTCTGCAAGGGGACCCAGTGGAGCCACGCTGCACCCAGACCACCGAGCTGCAGAGCTGTGAAATGAGGAATGGTGTGGTTTCAAGCTACTCAATTTGCGGTGATTTGTTCTGGCAGCAATAAAAATGAACGCTGGGCTTTGTCGAGGTCGGAGCCTTTGGGAAGATCTGCTGTTTCCTCTTCTAGCCAAGTTTCTCAGCGGCAAAGCGCCTCTCTACAGCTCGCCCCTGTCTGCGTGGTTTGTGAGGAAACTTCTGAGCCTACAGCTCGGGGTTTTCGTCTCTCTCACAGCAGCTTTCTGCCAGCGTGGGTGCCTCCTCAGAGCAGCGAGTCGGGAGCTCCGCAGCCCTCCTGGTGCACTGGATCATCACCATTTCATCGCCCTGTGGGAGCTTGCCCAGCCAGCCTCCAGGGAAGCCGTCAGAAACAGGCAAACACTCATTTCACGAGCCCGCCACTTCCAGCTGCAAAGTAGAGCCGGGCTTCTTTCGCACCAAAAGCAAAGCATCAAGTTAAACGTTTCTGACACAGACCTATCAAGCAGGTGAGTCACCTCTCTGAAGACTGCCTCCTGCTTAGCCAAGGGCAACCATCTTCTGCAGAAATAGGGCTGGAACAAAGGGCTCTGCTGCTTTCATTCTGGATTCCCTGTGAACGGTTGGCTTCCACCAGTCGAGCCTGGAGCCAACGATGCCAATGGCAGGGATTAGCTCTGCAGGCAGGCCGGTGCGGTCCATGGAGAGACGCCATCTAATCCAAAATGCCTTAACCGAGGGCTGGGGGCCAAGAAAAAGAGTCAGATCCTGCCCACAAATATTCACAGTGGAGGGGGGAGGTGAGCCCAAGAAGAAGGAAGGATGAACACAGTGGAGTGGCGGATGAGCCCAAGAGGAAGGAAGGATGAACACAGTGGAGTGGGGGATGAGCCCAAGAGGAAGGAAGGATGAACACAGTGGAGTGGGGGATGAGCCCAAGAGGAAGGAAGGATGAACACAGTGGAGTGGGGGATGCGCCCAAGAGGAAGGAAGGATGAACACAGTGGAGTGGGGATGAGCCCAAGAGGAAGGAAGGATGAACACAGTGGAGTGGGGAGATGAGCCCAAGAGGAAGGAAGGATGAACTGGTGCTACAGCAAGGTGTGGAAGGTCCCCCCGTGCAGAGACGGGGTGTTTCTCTGCCGCACATTCCAGGATGCTTCACGGGAGAGACGACATCTGAGCCCGACCTTGGCATGAGGGGCTTCCCTGGTGGCTCAGCTGGTAAAGAATCCGCCTGCAATGTGGGAGACCTGGGTTCGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGATTGCCTACCCACTCCAGAATTCTCGCCGGGAGAATCCCATGGACTGTACAGTCCACGGGGTCACCACAAACCAGACACGACTGAGCGACCCTCACTCTCACTTTTGGACATCATTATGTCTATATTCAGACTTGGTTCACCCAAAAGGCGTTTGAGTCCTGTGTGCTCTGCCTCGTCCTTGTCCTGTCCTTGGTGGAGATACATCCTCACTGATGACAGACACGCAGTGCTTACATGCCGTGATTCCGTGTCAGGGGAGTTCTGATAGAGCATGATGAAGATGTTTTAAGGTAGGAAACTTCACGGTTAGGCACAGACAAGCATCTGGAGAGAGTAAAGGCCGCCTGTGAAGGAGGTGTTCTCTCGACGGCCAGAGTATCACTGCCTCTAAGTCCCTCGGTGGACGGGGAGTGGCTCCTGATGGACCCCTGTGTTCACGTCTGCGCCTCTGTGTCTGTCCGTCTGCACATTCCGAAATCGACCCATTTGCTCCTGTCTTCGATCCCAACCAGGCCCTCAGGGCTCAGTCTAGTGTTCCCCCTTTCCCTATTTGTGACTCCCTTTTCAGCGGTGGGATGGAGTCTCTGATCTGTTTGGGCTGCTGTAACAACACCACCAGCATGGTAGTTACGCCTGTCTGGGCGGCGGATCAGCAACAGATGTCTATTTCCCACTGTCCCGGAGGCTGCAAGTCCAAGCTCAAGGCACCAGCGCATTCGGGGTCTGCTGAGAGCTCACTTCCTGGTTCATAGACAGTCATGCCACCGGGTCCCCGCACTGCAGAAGGGAGAGAGGAGCTCTACACGTGGGACCTCTTTAATAAGAGCATCAACCCCTGCATGGGGGCTCCACCCTCATGACCTAATCACCCCCAAAGGCCAACTTCCCGAGACTGTCACATTGGGGATTGGGCTTCAACACATGCATCTTAGGGTTGGGTGGGGGACACAGACCCTCAGCCTGCAGCATAGCCCCAGGTGGACAGTAAGGCTGGAGAACGCGGTATGTTGAGAGACAGCACAGATGTGCACAGTGGTTCGGGGTCTGCCAAGGAAGCACCTTGAGTATTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCTGGAGTTCACTCAAACTCACATCCATGGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGGGTCTTTTCCAATGAGTCAACTCTTCACATCAGGTGGCCATAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTGGACCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTGAAAAGCATCAATTCTTTGGTGCTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACTACTGGAAAAACCATAGCCTTGACTAGACAGACCTTTGTTGGCAAAGTAATATCTCTGCTTTTCAATATACTATCTAGGTTGGTTATAACTTTCCTTCCATGGAGTAAGTGTCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGGCCAAAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTCCCATGACGTGATGGGACCGGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCCACTCTCCTCTTTCACTTTCCTTGAATATTAGGATGAGATAAAAGACTTTCTCTTTCAGGTACTGTTGAGTTATTCAAGGTCACTGAATAAAGAATAAGAAGATTTAACCAGAAGAGAAAAACTAATCGAAATGTAAATAGAAATACATAAGGTTTTAGGTAGAAAAGGGAAGACCAGGAGTACTTTTTGCAGACTCACAAAAGCTGTCTTGATTCAGGACTTAGTTGCACAATTGCTCTCTCGATTCTGGTTCCCGGCCTACTGGGCTCCGTCTGTGATAAACCAAGCACATTCCTTCATTTCCTGGTCAGCCTTCTACCTGGAATCTGAGGGTCAGAGTGAACCGTCTCTAGGAGACACCGCGTGTGTATTTCCCCGCAGTCCATGCTGGTAAACAAGAGACATTTTGTTCACCCAGGAGCAATAACATTTGTTATGCTTGGAGTGGGATTTATTGTGAGAGGGCTCTGGTATCTTTTTTCAATGACTGAATCATTCAGGAAGCTTTTGGTGGCAAATAATTGAAAACCCAGCATGACTAGCTTAAGACTAACGAGGAATTGTAACGATGCCTGCAGCTGGAAGGTCAGAGGAAGGCTGGGTCCCAGGCTGACTTAATTCAGGAACTCTGGACCATGTGCGTGTGATCCTCTGGGCTCTGCTTCCTCTCAGCCTTGTGGTTGAGAGGACCACGCTGCTCTGGATCCCACCTCAATGCCTCACAGTATCCAGAAGAGAAAGAAAAATGTTTTCCAGAATCTCTGCAGGAGAAGAAAGAACTTTGCTGAAAGTTTCCTGTCTCCTAGTATCTTAAAGAAACTTTTATTTCTTTGCTTACATTTCTCTTTTTGTTTGTTTGTTTTGACACAAACAGACTCTCAGAAAATCT TCONS_00135437 . 5' 137123 TCONS_00135437 . 5' 137123 EMBV3_25625 GTGGCGGGTCCAGTCATCCCTGTTGGCCCGGTTTTGGGAACTCGGCACCTTCAAAGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01482 GACGGAGGGGGAGAGAAGTGGATTCCGGTCATGCATGCAGAGTCCAACCTTACAGTTTTA Gene GeneID:509257|LOC509257:XM_002695851:306_cdna Constitutive 0 NULL GeneID:509257 19 GENE LOC509257 NULL similar to Rho GTPase-activating protein RICH2 (Rho-type GTPase-activating protein RICH2) (RhoGAP interacting with CIP4 homologs protein 2) (RICH-2) (NPC-A-10) EMBV3_05955 TTCTGCAAGGTTCTCCCACTTGAGTTCCCCTTGTATGGGTTATCTGGTGAATGGCTTGCC Gene GeneID:534216|RBM5:NM_001046374:235_cdna Constitutive 2 NULL GeneID:534216 22 GENE RBM5 LUCA15 MGC137881 RNA binding motif protein 5 EMBV3_41230 ATTCTGCAGAATGTTACTACAACATACAAGGGTCCTGGTGGAAAATGTGGAAGATCTTAT Variant GeneID:508222|CPB2:NM_001045997:61_cdna 170^294 1 EMBV3_11953 GeneID:508222 12 GENE CPB2 MGC137155 TAFI carboxypeptidase B2 (plasma) EMBV3_24906 CAAAGGCCTCCACTAACCCCCCAGCTCCAAATCTGAGCTTCATCCCACACAACGGAGAAA Gene GeneID:522073|RCN3:NM_001046260:262_cdna Constitutive 0 NULL GeneID:522073 18 GENE RCN3 MGC128910 reticulocalbin 3, EF-hand calcium binding domain EMBV3_38990 TGCCTGGATGACATTGGCCATGGGATCAAGGAGAGCACCCCGGATCCCCGAACCCGTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07225 TGATTAGAGGGCAGAGGTCAGAGGGCTAGACCCAGTCGGGACCTTTCATTTTATCTCAGA Gene GeneID:515122|ABHD14A:XM_002697067:571_cdna Constitutive 3 NULL GeneID:515122 22 GENE ABHD14A NULL abhydrolase domain containing 14A EMBV3_32385 AACAAGGAACTGGGTAACTTTTTCCGGAACCTGTGGGGACCTTATGCTGGCTGGGCCCAA Gene GeneID:520497|OGG1:NM_001080285:122_cdna Constitutive 1 NULL GeneID:520497 22 GENE OGG1 NULL 8-oxoguanine DNA glycosylase EMBV3_40782 TCCCCGCGGGGAAGAACGTGCTGCTGCTGGTGGTGAGAGATTTTCAAGAATATGTAGAAC Variant GeneID:510330|DYNC1LI1:NM_001046052:80_cdna 332^679 3 EMBV3_19448 GeneID:510330 22 GENE DYNC1LI1 MGC137616 dynein, cytoplasmic 1, light intermediate chain 1 EMBV3_30781 CTTGCGGCCAGCCCCCTGTTGTAGAAAATGCCAAGACCTTTGGAAAGATGAAACCTCGTT Gene GeneID:282662|VCAN:NM_181035:15_cdna Constitutive 0 NULL GeneID:282662 7 GENE VCAN CSPG2 versican EMBV3_23090 AGTGGACCAATGGCTAACACTCTATGTTCCCAATGCAGGGGGCCCAGGTTTGATCCCTAT Gene BVV0102_092482 + 0 NULL GK000001.2:41998881-42035718 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24399 ATGAGCCCCTGTCTCTGTGGACTGCTGGTTCTGATATCCTGGGTGCTGATTGCCTTGTTT Gene GeneID:787604|LOC787604:XM_002707852:410_cdna Constitutive 0 NULL GeneID:787604 7 GENE LOC787604 NULL similar to olfactory receptor Olr1075 EMBV3_22426 CTCTCCGGACACCAGGATGTCTTCAATAAGGTGACTACACGGACTTCTATTCCTCTCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12519 GTGATTCCTCGGGTTTGTCCCTGAAACCTTATTCTGGAGTGCCCCAAGGAGTGTGTGACT Gene BVT0102_056817 + 0 NULL GK000003.2:42266932-42408613 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173117 1 XLOC_104297 Coding TCONS_00173117 XLOC_104297 Coding Coding LOC100847434 3:42282663-42408882 = TSS128775 1467 1 TCONS_00173117_2 223 6 0.988424788857374 8.34704766203257e-05 3.42481844829633e-05 6.6235134130279e-05 2.83031436852974e-05 1.51447200724473e-05 4.87669268914584e-06 0 2.62070436746534e-05 4.03380893743437e-05 0 0 2.43741459311552e-06 2.93382681932313e-06 4.00817336356878e-05 9.32192168895541e-06 0 9.61957985499238e-05 0 4.88815337347261e-05 4.65702557360333e-05 1.13813689205343e-05 8.09344235244008e-05 5.62825147215169e-05 0 9.20964182923512e-05 4.56250213834308e-05 3.99396163578312e-06 0 0 0 XM_005204097.1 DPH5 PREDICTED: Bos taurus DPH5 homolog (S. cerevisiae) (DPH5), 1e-52 212 100.00 0.0790729379686435 NM_006070.5 TFG Homo sapiens TRK-fused gene (TFG), transcript variant 1, mRNA. 7e-37 159 81.44 0.111792774369461 0 coding 0 0 0 0 -0.0214417425870367 0.838157885113856 -0.0240022485751186 0.612035074808247 ATGGATATGAAAATCAAGTGTCAGCTACACCGGGGATACCTAAAATCTAGAGTAGACAATTACCCGCTGAGAAAACGACAGTTGAATCCCTGTTCTCCCCAAATTCCTATCTGCCGCCGTTCCCCAGAAGTAGTTGCCCAAGCGGAGGATTTACCCGGAGAAAGGATCCACGCCGCCGGCCTCACCTACGATGCCGCAAAGCGCCTCCGCTTTACGCGGGGCCGTGATTCCTCGGGTTTGTCCCTGAAACCTTATTCTGGAGTGCCCCAAGGAGTGTGTGACTGGAATCTGCCTCAGTCATCACTCGCGCGGGCCCCGACCAATCGCACTGACCCACCAAGCCTAGCGAGAGCTCGGGCCCAGTACGTGGCAGGTGGGGAACGAAGAGGGGCGGGAATAAGAAGAAAATCTGTCCTTTCGCTCCGCCTCAGAGCTATCGGACCGACCCAGGACACATGCGCGACGTCGATAGGGCGGGGACTAACGACGCCGGGGTCTGCAGGGCTTTTCCAGGAGACTGCCAACAAGCACAGCCAGCTCTCAAGCTGTATTGCGCAAAGATTTGCAGCCCACAAAGATCGGGAGTTTTTTCCAAAGGACCTCTTAAGTGAGAAACTGAGATCTCAAAAAGTTCACCAAGACCTCCAGGATCCATCATCTTCCTCATCCTGAGTGCAGCTCCTGTTACTGCTGCTTCTCTGACCAGCCAGTCAGGAGGTGGTCAGCAGACTACATACCCAAAGACTGGCTCTTCCAGTTGGAGAAATGACCTTACTTCTACGTGACTCCGGGAGTGAAGGTCAAGCCCCATATGAGTGTTTCTATGGTGGAAGCCCATTATTCAAGTCTCATCTTCATCTGTAAATTGTGAATACTATTCATATCTCCTTGATTCAAGGTTCAGTTGAAATGACACATGTGAAACTTCTTCCCGAGAACCATCTTAGCAAATGTATAGAAAGCTGCATAAGTATTAGTTGTTCCATATGGAGGATATTTGAACCTCATCAGTCCCAACCCTCTGGTCTCTTTATCAAGTCAACTGGGTCTGCTGACAGAGCAGGAATATTAAGAAACATACAAAAATGCAGCCCACCGATTTGACCCTACTGCTGCATCTTGTTCTCTAACCACTTGGTTTCCTAGCAAAGAGTTCATTAACCCACTGAGACCCTTCCTTGATGGGCATTTGGACACTGACAGGTACTTACTTCTCTCAGCAGTCTCTCCTTAGATAGCCTTTAATGATTTCCCTCATATTCCACACATTATATAGTGTTAGGCAAGAGGCACTCCTATCTTTTTCCTTGCTCTCTTACAGGCTGGGCTGATCCCAGACAATCGCTCAGTGGAAGGCTGATGGGACCAATATGTTCCCTATCAGATATACAATGAAGAAGAGAATTTAAGTAAATAAACCTGTTCGGTAAATAAAGAAGATAAGACTTCCCTGGTTGTACTGTGGAT EMBV3_22577 CATGGAAGTCCGCTCTTCGCAGTCAAGGGTTCTGGAAAGTGAACTGAAGCGCAGATCAAT Gene GeneID:100336665|LOC100336665:XM_002699807:59_cdna UTR3_Alt 2 NULL GeneID:100336665 X GENE LOC100336665 NULL misshapen-like kinase 1-like EMBV3_00379 GCTGGCTGTGACCTCGATGTCCAGGATGATGCTGGAGACACGGCACTTCATATTGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06591 CATTACAGACATTGGTCAGTGTTAAATACACTTGCATTGATGTTAATTCACCATTAAAAT Gene BVT0102_383115 + 0 NULL GK000015.2:14716424-14717410 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060564 TCONS_00060566 TCONS_00060565 1 XLOC_036773 Coding TCONS_00060564 XLOC_036773 Coding Coding CEP57 15:14716341-14758000 j TSS45264 2943 1 TCONS_00060564_4 350 10 0.929593355417927 3.54468943193421e-09 5.45053525744374e-06 3.13234938864486e-07 0.00035514704636357 2.11412514839648e-08 0.000415108176001361 0.0011279266435702 8.28301141909941e-14 0.00162331285808789 0.000557562865706343 0.000112665465468893 0.000298880085590583 9.04158743242524e-10 2.05639239513266e-28 0.000232561596868615 0.00280891708700398 0.00229612874044036 0.00284923395685238 6.49827027909972e-39 7.43932632712807e-30 0.000228792009536696 0.000950965230093023 0.0018213804966779 0.00296060853346202 3.49519562992023e-20 1.35148735465326e-27 1.21684869049877e-07 0.000339760921858679 0.00015704098591118 0.00023624473384888 XM_005215754.1 CEP57 PREDICTED: Bos taurus centrosomal protein 57kDa (CEP57), transcript 0.0 4102 100.00 0.772341148487937 XM_005274411.1 CEP57 PREDICTED: Homo sapiens centrosomal protein 57kDa (CEP57), 0.0 2601 84.73 0.796466190961604 TCONS_00060564_4 sp|Q865V0|CEP57_BOVIN CEP57_BOVIN Centrosomal protein of 57 kDa; 0.0 719 100.00 0.997142857142857 2 coding 0 0 0 0 -0.0700586718890289 0.559615033598164 0.00839547547835817 0.874464472806021 GGAGAGGCGTCCCCGGGTCAAACTCAAGCTCTCTCCGGCGTTTAGCCCGAGGGAAGTGATGGAGAGTTTTGAGCTTCGAATTCGGTTTTATTTTATCCCATTCGACTCACTCGCCACTGGAGACACCAAAACCCCTCGCCCAGGTTTCCCCCTCGAGAAGGCCCGCCTCTGCGCAGGAGCGCCGCCCGGTCGCCCGCCGCGTCCCGGCGGCGATCTGTCAGCGACGAGCTACCTTGTGACGTCACCGAGGGAAGAGGCGGGTTCTCCCGCCAGCGGAAGACGCCTGCTCTCTTGATTGGCTGCTCAGGACGTCCGTTAGGGCGTGTGGTCCTTTCCGTGTGCGCTCCGAGCGTGGGCGTCCCGCTGGGGGTGTGTGGCAGGGGTTTCCAGACCCGGCACCAGCACCCTAGCTCCTTCCATCAGGGGTTCGGCTCAGGGTCGCCCCTGGCGGGCGGCTCGCGAATCTTGAAGAACAGCCACGCGAACCCAGAGCGTGCCGGGGCTGCGGAGCTCCCCTGGGCGGGCTGGAAGATGGCGGCAGCATCGGTCTCTGAGACTTCGGCTTCTCAGTTCTCGCTATATTTTCTGCTCTGAAGAATCTTCAAGATAAAATTCGACGTTTAGAACTTGAAAGGATTCAGGCAGAAGAAAGTGTGAAAACCTTGTCTAAGGAAACGATTGAATATAAGAAAGTATTGGATGAACAGATACAGGAAAGGGAGAATTCAAAGAACGAGGAATCAAAGCACAATCAAGAACTGACATCTCAGTTGTTAGCTGCAGAAAATAAATGTAATCTTTTAGAAAAACAATTGGAATACATGCGGAACATGATAAAGCATGCAGAAATGGAGAGGACATCTGTATTAGAGAAACAGGTCTCCCTGGAAAGAGAACGACAACATGATCAAACACATGTTCAAAACCAGCTTGAAAAATTAGACCTTCTGGAACAGGAGTATAACAAGCTTACCACAATGCAGGCCCTTGCAGAAAAAAAAATGCAAGAGTTGGAAGCAAAACTCCGTCAGGAAGAACAAGAAAGGAAACGAATGCAAGCTAAGGCAGCCCAGTTGCAGACTGGTCTAGAAGTAAATAGACTTATCTATGAAGATAAGGCAACTTCATGTGTTCCCAATACAAAAAGAATTAAAAAAAAGAAGTCAAAACCACCAGAAAAGAAGGGTTCTAGGAACTATTTTGCTGTACAGCCACATTATCGATTATGCTTGGGTGATATGCCATTTGTAGCTGGAAAGTCCACCAGCCCCAGCCATGCAGTGGTAGCCAATGTTCAGCATGTCTTGCATCTAATGAAGCAACACAGCAAAGTCTTGTGCAACGATCGCGTAGTCAGCAGTATCCCTTTGGCAAAACAAGTGTCTTCACGAACTGGGAAGAGCAAGAAGTCAGCAACACCTCCCTCTTCTAGCAGTGTTAATGAAGAGCTGTCTGAAGTCCTACAGACTTTACAAGATGAATTTGGGCAAATGAGCTTTGATCACCAGCAGCTTGCAAAACTTATCCAAGAATCACCAACTGTTGAACTGAAAGACAACTTAGAGTGTGAACTGGAGGCGTTAGTGGGAAGGATGGAGGCAAAAGCCAATCAGATAACTAAAGTTCGAAAATATCAAGCCCAGCTGGAGAAGCAAAAGTTGGAGAAGCAGAAGAAGGAATTAAAAGCCACCAGAAAGACTCTTGATGAGGAAGGAAACAGCAGCAGCCGTTCTACAACCACAGGGACCACAAATAAGAAGGACTTTGCCAAACCGAGACCTGGAGAAAAAAGCAGGAAAAATCTTCAGTTATTGAAAGATATGCAATCCATACAGAATTCATTACAAAGCAATAGTTTGTGTTGGGATTACTGACTGGTACCAGGTCATAAATTTTATTCACATAATCTGTACCTCATCAATCAGATATTGACTTTCCAGGTCTCATGTTGGAATTACTTAATAGCAGGCATTTAGGGACCCACGCTACATTACATAGGCTTCTTGTGCCACACATCACAACTAAATGGTAGCCATCTAAACAGAAACGGGGGGTAGTTTTAAAGGCCAAGAAGCCACACATACTCTGTTTCTTTGTTTGAGATGAATTTGCTGTACTGAGATATTGCACTTTGTAAACAAATTACCAATTTTTTACTTGTGGGTGTGATTTTTTTAAATAGTTCTATTATATAAGTAAAATTAGGTTTAAATTATCAAAGTATGAGGCTATCCCATAGGCAGTGTTTGTTTGAAAAGTCTCATTTTTAAATCTTCCCTGGCATGAATCGCCTGCTTTTACTTTTCAATACAACCATTAAATATGCTCCATTTTGACTACTGATGGAGGTTTTCTATATTTAAATATTTATACATATTTAAGAGGATTGCTTTATTTTGCTTTTTGACATTACAGACATTGGTCAGTATTAAATACACTTGCATTGATGTTAATTCACCATTAAAATTTTTAAAGATGCATCATTTTAAATCAGTTAAAGGTGAAAATCACAAAAGCATTTTTAAAACTATAAACAAATTGTTAATGACGTAAATGAGGTTTTCAAATGAAGAGAGAAAGGGAGGTGTTGTAAAGTATATACATATGTATTTTTAGATAATACCTGTTTGTAATCATGCTATTCATTTCCAGGCATTATGGTTTTTAATCTTAAACTCAAAATCCCTGATTATTTAATTTTGTGTACAGTATGAGTGCAATATTAACTGTACACATGTAATTGTCATTGTTAATAATGTGATTCATAGTTTTGAATAGTTCAAGACATGTTAACTTTATAAATTTGCCACTGAAATCAATAAAGCAGCTTTTTTAAGGAAACACTGAAATTTTCCTTAGCAGCCTGTTAATAAAGGCTTTATTTGTTGTAATCTCTCAAAAAAAATACATTTTTAAATAGAACATTAATCTCTTATGAGAAAC EMBV3_34323 GGTTCCCCTCCCTTGCCCTAAAATCAACTGTGATGCCTCTCTTGCCTCTCACCAGTAAAT Gene BVT0102_025695 - 1 EMBV3_18587 GK000026.2:37936024-37939959 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29216 TCTTTGGGCTCGTCCTTCCAAGTTACCTCAGACAGAACCCTCTCGTCACAGGGATAACAG Gene GeneID:783536|SLC23A2:XM_002692198:103_cdna Constitutive 1 NULL GeneID:783536 13 GENE SLC23A2 NULL similar to Solute carrier family 23 member 2 (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Na(+)/L-ascorbic acid transporter 2) (Yolk sac permease-like molecule 2) (Nucleobase transporter-like 1 protein) EMBV3_18418 GCAGCTTTTAACAATCCTGTCGTATTTGTACTAACCCAAATGATTCACAGCGACAAAACC Gene GeneID:532571|WWC2:XM_002698669:149_cdna UTR3_Alt 2 NULL GeneID:532571 27 GENE WWC2 NULL WW and C2 domain containing 2 EMBV3_30093 AGGTGACCGACGTCTATGAAATGGAAGGGGGGCTGCTGAACCTGCTCAACGACTTCCACT Gene GeneID:507607|CCDC28B:NM_001034305:76_cdna Constitutive 0 NULL GeneID:507607 2 GENE CCDC28B MGC127184 coiled-coil domain containing 28B EMBV3_29737 AAAATTCCCTTTGCCACGAACCATCTGGGACGGCGAGGAGACCAGCTACTGCTTCAAGGA Gene GeneID:511371|SIX1:XM_002691019:360_cdna UTR3_Alt 2 NULL GeneID:511371 10 GENE SIX1 NULL SIX homeobox 1 EMBV3_25307 GGAGATGGAAAACTATGAAGCCCCCTTCCATTACCTGGCCAAGCAGTTTCACCACCTGTA Gene GeneID:617147|RABL4:NM_001076445:32_cdna Constitutive 0 NULL GeneID:617147 5 GENE RABL4 MGC140777 RAB, member of RAS oncogene family-like 4 EMBV3_16099 CCAGGAGCCTGCCATCCTTGATAAGCTGCGTCTTTCGTGGTTGAAACGGGAATCAGAGAA Gene GeneID:509238|TAF1C:NM_001077888:17_cdna Constitutive 1 NULL GeneID:509238 18 GENE TAF1C MGC139975 TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa EMBV3_34056 TTCCCGCCCCTCTCCGGGGACGGGTTCCTGACTTGTAAAGAAACTAAAGATGTTAGCGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06580 CATGTGTTTCCTGCCGACCATCATCAACAGGTGGTATTTTGGTGCCTTAATGAAGAGTCA Variant GeneID:767913|GDPD3:NM_001076990:419_cdna 727^838 1 EMBV3_05237 GeneID:767913 25 GENE GDPD3 MGC127794 glycerophosphodiester phosphodiesterase domain containing 3 EMBV3_43347 GCTTTGCCTCTGGCCCTCTTTTGTCTATTTTGGAGTTACTTGGTAACTGGGTGTGTGAGG Gene GeneID:540347|YIPF6:NM_001101206:74_cdna Constitutive 2 NULL GeneID:540347 X GENE YIPF6 NULL Yip1 domain family, member 6 EMBV3_43144 AGCTGGTCTTTGGCCTGGAGATGAAGGAAGTCGACCGTAGCAGGAATATCTACACCCTCA Gene GeneID:618686|LOC618686:XM_002700298:16_cdna Constitutive 0 NULL GeneID:618686 X GENE LOC618686 NULL similar to hCG1799335 EMBV3_42996 CCATCCACTGCACTACACCACCATCCTCACCAACAGTGTAATAGGCAAGGTTGGTTTGGC Gene GeneID:782692|LOC782692:XM_002707850:2_cdna Constitutive 0 NULL GeneID:782692 15 GENE LOC782692 NULL similar to Olfactory receptor 51L1 EMBV3_35478 GTCAACCCTCGACATACCTGTGTTCAGTCCTGTCATGGCCACATGGCATATCAGTGCCAA Gene GeneID:533158|C17H12orf52:NM_001046344:228_cdna Constitutive 1 NULL GeneID:533158 17 GENE C17H12orf52 C12orf52 MGC138063 chromosome 12 open reading frame 52 ortholog EMBV3_25893 GCAGCTAGTGGTGGAATTTCAGGCAAGTGGGAAGGTATTTACAGGAGGAAACCACTCAGG Gene GeneID:617915|ANGPT4:NM_001076483:1333_cdna Constitutive 0 NULL GeneID:617915 13 GENE ANGPT4 ANGPTL4 MGC137324 angiopoietin 4 EMBV3_09321 CTGTCCACATGTAGAAGGCGGTCTGGCCAGTCTGTACTGGACTCTGAATAAACTCTCTGT Gene BVT0102_141935 + 0 NULL GK000007.2:45025722-45027150 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216781 1 XLOC_131338 Coding TCONS_00216781 XLOC_131338 Coding Coding LOC100337214 7:45023037-45029452 = TSS161601 5672 2 TCONS_00216781_3 290 2 0.11599625818522 0.000245986545943246 0.000177723732634078 0.000247432925833744 0.000392904548032818 0.000244677270635662 0.000106056255919893 0.000269916590169894 0.000418765510514351 0.00055510004172813 0.00086992776037031 0.000475741214261715 0.000120755850383704 3.49718400065456e-05 0.000153863073307865 0.000268206905913846 0.00664748244943226 0.00226400111286302 0.00336029045444102 0.000244895512211102 0.000135112710581023 6.43378207169464e-05 0.0025463263549798 0.00183598530478149 0.00296405429709621 7.73504116401605e-05 0.000118252429178882 5.40898091384259e-05 0.000941192694242862 0.00112630930131278 0.00143058228920042 XM_003586294.2 LOC100337214 PREDICTED: Bos taurus lipid phosphate phosphatase-related protein type 3-like (LOC100337214), mRNA. 0.0 2839 99.94 0.278032440056417 NM_024888.2 LPPR3 Homo sapiens lipid phosphate phosphatase-related protein type 3 (LPPR3), transcript variant 1, mRNA. 0.0 1285 80.46 0.243653032440056 TCONS_00216781_3 sp|Q6T4P5|LPPR3_HUMAN LPPR3_HUMAN Lipid phosphate phosphatase-related protein type 3; 5e-123 372 84.33 0.920689655172414 0 coding 0 0 0 0 -1.06912292657129 0.0354742886506023 0.00268982584215384 0.953463352654993 ATGAAAGGTTCTGATGAGCAGAACCTGAGTCACATGGTCCTCTGTAAGTTGGGGATGGTGGGTCAATATCTCATGAACCTACTAGAGGGAGATGCTGGGTACTCCCAGAAGAGTGGGGAGGACCTCAAGCTGCATGTCTGTGGCCCAGTGGGGACCCTAGTCTCCAGCCACAGGCCTCACACCCAGTCCCCATCTCATCTCTAGGCCTGCCATGCAGTGGGCAACTTCCAGGCCCCTCCAGCAGAGAGACCAGTGGCCGTGGTGCCAACTAAGGACGCGCTAAGGGCTCTGACCCAGCGGGGCCATGACTCGGAGTACCACCTTAACAAGTCCGTGAGCACCGATGAGCTAGGTCCACCCAGCCGGTTGGAGGGTGTGCCCCGGCCCGTGGCCCGCGACAAGACCTCGCTGGGCAGCCTAAAGCGGGCCAGTGTGGATGTGGACCTGCTGGCCCCGCGCAGCCCCATGGGCAAGGAGAACATGGTGACCTTCAGCCACACACTGCCCCGTGTCAGCACGCCCTCGCTAGACGACCCCGCCCGCCGCCACATGACCATCCATGTTCACTGGACGCCTCCCGCTCCAAGCAGCTCATTAGTGAATGGAAGCAGAAGTCACTGGAGGGCCGAGGCCTGGGGCTACCGGATGAGGGCAGCCCTGCACACCTGCGGGCACCCGCAGAGCCCATGGCTGAGGAGGAAGAGGAGGAGGAGGAGGTAGTAGAGGAGGAGGAGGAGGAGGGGGAGGAAGGGGGTCCAGCACCTCCCTCACTGTACCCCACAGTCCAGGCTCGGCCAGGGCTCGGGCCACGCGTTATCCTGCCGCCTCGGCCTGGACCGCAACCTCTGGTTCATATCCCTGAGGAGGGGGCCCAGGCAGCAGCTGGCCTGTCCCCCAACAGCAGCGCAGCTGTGCGGGCCAAGTGGCTCATGATGGCTGAGAAGAGTGGAGCAGCAGTGGCCACAGCCTCGGCCCAGCCCCGCATGGCCAACCCGCCCCGGCTGCTGCAGGTCATTGCCATGTCCAAAGCTCCAGGTGCACCCGGCCCCAAGGCAGCCGAGACGGCTTCCTCATCTAGTGCCAGCTCTGACTCCTCCCAGTACAGGTCACCGTCTGACCGCGATTCTGCCAGCATCGTCACCATTGATGCACACGCACCCCACCACCCTGTGGTCCACCTGTCTGCGGGTAATGGGCCCTGGGAGTGGAAGGCGGCGGGAGTCGGGGCCAAGGTCGTGGAGGGAGAGGGTGGCTATGAGCTCGGGGACCTGGCCCGCAGCTTCCGCGGTGGGGCCAAGCCCCCAGGCATCTCCCCAGGCTCATCAGTCAGTGACGTGGACCAGGAGGAGCCACGGTTTGGGGCCGTGGCCACTGTCAACCTGGCCACGGGTGAGGGGCTGCCCCCACTGGGCGCAGTCGATGGTGTGCTGGGACCAGGCAGCCGGGAGTCGACGCTGCGTCGAAAAGCAGGCCCAGCGCTTGGTGATCGGGAAGCAGCGGAAGCCGAGGCCGAGAGCTACTACCGGAAGATGCAGGCTGCACGCAGGTTCAAGGACTGAGGGCGGGGGTGGGGGTGGGGCAGGGGGGTCTTGGTAGACAATAAAAGGTGATCCTGGAGAAGAGCTCACAGTCTGAGTCTTTCTGGAGTACTGGGTGTAGGGGTGGGACCGAAACCCCCACACATGAAGGGTAACATGGCTGAGTTTACAGAAAGGAAACAGCAGTGAAATCAACAGGCCCAATAAAGAGGGGAATCAAGTGCAGGATACAGAGAGTTTATTCAGAGTCCAGTACAGACTGGCCAGACCGCCTTCTACATGTGGACAGGAAAAAAGAGCCTACAGAAAAGGTAGGAGTTGTTATAAAATCGCTTTAATTCAGTTCTCTCTGCATTACAAGCCGGCAGTGGGCGGGGCCTGCCGTGCTCCTTACAATACTGAGCCTGTAATTGCTGTTATCAAAATATACATCTGTGTCACCATAAAAAACCGCATTTGCTGCCCCTCACGTCTTACAACAGGTATAAAAAATTATAAATATTTACACCCTTGTTCCACCCCGACATGGAAACTTGAGGCCCAGGCCCCGAAGTGAGGGCCGGCCAGCAGAGGCCTGCGTGCAGGGCACCCCTTGGACCCGTGAGTGCAGGACGAGGCGTGAAGACCGGAGGGGAGGGCTGTTGCCCCACCTCCTGGGGTCCCAGCATTAGAGGCAGGAGAAAAACAGAAACAAAACTTTGGTCCAAAATTTGCAGGAAAAAAAGAAACCCTGAAAGTTGAAGAGCACTTGTCCTCAGAGAAAGGACAGTCAGGTGTGAGTAAGGCATCGGGCGGCAGATGCCGGCCCCGCTGTGTCTGCCCTGGAAACTAGATCCTGCCCTGCGACTCAATGACAAGGAATAAAATAAAAGTACAGTATACAAGGTCATACCACAAGGAGAAAGTTTAGGTTACACTCATACCATTTTTATCATCTTGCTATATAAAAAGTTACTTAAAACTATTTCTTTTGCATATAAATGAAAAAGATTAGAATATTTGGTCAACTGGAAATATTGCTAGGCACAGGTGTCTGCAGCTGCATCGAAGCATAATACAGAGATTACAGTGAAAACAAAGCTGAAGAAGCAACAGGGAAGGGTCCGGGGAGGCCCCAAGGCTGGGGGAGAATCACACACTTGATTAAAGGATTGGGTGGCGGCCACAGCCCCCCACCACACCAGGCACATGATCCCAGGGGAGGCTGACCCCGCAAGCCCTGCCAGGGCAGCGGGTTTAAGGCACAAGAAAGCCAAGTGGGGGTTTAGGAGCGCCCGCCCTGCAGGCGGCAAAGGCACAGGCAGGGGCCGGGCGGGTGGTGCCATCCACCGTCACCAAGAGCTTGAGGCTGGCACCCCACCTCCCCAAGGTGAGCAAGTGAATTAGATTTAATTTCTTTTAAAAACAGGTAAACTGATTTCTCTTTTAAAAAAATAAAATCTCTGGTCTTTTAAGGTCACTTCAGCTGCTTTTTAAAGTGGCTTTTTATCTGGAATGATGGAAGTTGTTGCCGGGTGCCCGGCAGGCTGGTCCTGGGTGGCGGCCTAGATGGTGGACTTGGAGAAGGACACCCGCAGGTGGTGGTTCTCACCCAGGTCATGGTTGTGCAGGTCGATGAGTGCCTGGATGGCCTCCTCCACTGAGCCCATCTGGATCAGCGCCATCTTGCGGTCCTTCCTGCAAGGAGTGGGGGAACACAGGCATGAGGAGCCGCAAGGGGCCAGGGAGCCTAGGGGCAGTGGGGGAGGGGACTCTGCTCACTGGAAGAACTTGAACCCTTTGACGATCCCGCCGTTACTGGAGAAAAGAATCTTGAGGTCATCCTCAGAGATGGAGGGCCTGTAAGTGGAGAGAGATGTAAGCCTGTCTGTGCAAGATCAAGGTCATTCCCTCAGGACAGGAATGTCCAGGGATTCGGGGGTGCCCAGAAATGAGGGATAAGATGATGGAAGCATCTGAGAGGCAGAGGCACTCACGGGATGTTGGAGAGGTGCAGAGTGGCCGAGGGTGGGAAGATGTTCTGGAAGTTCTTGGAGCCAGGCTTCTTGAAGCGGTGCAGGGGCGAGTTTCCATAGTCCTTGGTCAGGCCCTGGTCCTCCTGGCCCTCGCGGGGCAGCTGCACGCTCTGGTGCTTAGAGAGTGTGATGCGCACTGGCTTTCCGTGCAGCTTGTGCCCATTGAGGTGACTCATGGCTGGGGGCGGGGCAGAGGAAGAGACAGCATACGTGACCTGAGGGCCCTGGGTACCACCAACAGCCCAGCCCTCCCTGGCCACCCCTTACCCAGCTGTGCCTGGCTCCCATCGGCCATTTGCACCAGGGCGTTCTCCTTCTTGTTGAACAGGACCTTCACACGCTGCACATCTCCATACACGCCTTCAAAAGCACAGGGACAGGGGGCTGAGCCCCAGGCCCCAGCCACTCTCCCGCCGTCCCCACGACCCACACTCCCACACAGGGCTGGCTCTCCCCAGTTTGCTTATTCTGCCTCTGAGAACCTGTCTAGACACAGGGAGCATGACTGGGAGGGCTGCCTTCCGCAAAGAAGCCATAAAATCCAGGAAAGGTCAATTGCCAAGGAACCATCCTGTAGCATGCTACCGACACATTTACGCTGCCAACAGCATGCGGGTAGGGAACCATGCTCTATAGAATCCAAATAAATACGCAAACCGCAGCCCAGACCGCACGCATCGGAATCTCAGGGCGTAACAACCACCTCAATTACATGAAAACAAGGTAATAAAAGTGTGAACGATAACATACCGAAAAGAATAAAGAGGCTTTGGGGTGTGACTCTCTTTAGAGGACAGCAGAGCAAGGCAGCGAGGGACAGGGAAAGGGAGAGGTCAGGGGGCGAGTTGCCAATCGTCCACCACGAGGAGGCAGCCCCGCAGGCGTGCAGGTTGATGGATGATGAAGTTGTCAGGATGTTAATATTCAAGGGCAGGTTGGTTTCCGGAGAGCAGGGTTTGAGGGGGAATTTTGTTTTTTTTTTTTTATTTATTTATGGTTTTGTTTTGTTTCAAGCAACAACAGGAAGCAGAAGTACCGTGCAGTCAGTTGGCAAAGAAATTCCGGATCAGGGCAAGAAAAAAAATTGGGAAAGGGGAAGGGGAGAAAAGAAAAAAAGTAGCAAAAACACAGGTCAGTAAATACATAAGAAAACACGCGGTGCCCCATCAGTCAAGACCACACACATTACAGGCCACACGCCGGGCAGACAGCCGGAGCACCCTCCGCGGGGAGGAGGCGGCGCCTGCTGGCCCCCCACTCGCTCCCCCAACCAGGCCCTCCAGGAACCGTCTCCTCAGCCCGCACCGGAGCCTCCAGTCAGGCTCGCCGGGCGCTGCGAGCGGACAGCTTGGCCAGAGGAACTGGGACAGGACTGGGGAGACTGAGAGTCACACGAGGTCAGACAGGCAGGAGAGCAGCTCATTAAACAAGAACCCCGTCTCTCGAGAAGCAAATACTGAGCCTCGCTCACTGGACCCCAGCTCCCTGAGCTAATCCAGCCCCAAGACAAGCCAGGCCTGGCTGCCACCTCAGGGACTGCCGGGTGGCCTCAGCTTGCACCCTCCCCTCAAGGCGCCCCTCTGCAGGCCAAGGTTCGCTGGGCTGGAAATTTCAAGTTTGTTCTCATGTACCAAATACTTCAACTCTCAACATCGTGAAATTAGGAACGTAAATTAAGATGTTAAGGAAACAAGAGAACTCCAAGCACTGCGGGAAAGGAGGCAGCAGTGAGTGACGTCAGCGCAGAGAGGAGGATGGGGACGCCCACGGGCACTGGCTGGGCCTGGCCCAGCTCCAGAGCCCAGTGCCCGGTCAGAGGCTCCATCTGCACTAGGACTAGGGGCACTCCCAATTCCTAATTCCCGGAGGCGCCACGTACCTCAGGGTTGAGATTGCTGACCAGCAGGACAGAGTTGCCTGCCCCCGCCAGGCCTGGGATGGCGATCCGGCCCGCTGCCGCTGCTGCTGCCGCTGCCGACGGAATAGCCAGAGGGGCCAAAGCCCCATGCACATTAGGAACAGAGAGACCTGCAGGGTGAATGGGGTTAGCTGAGTGTGGTGCCCACAGTCTCCACAAGGAAATCGGTCTTGCCCATCCTCATGCAAACAGAGATGCAGG EMBV3_08382 GCACCCAACACGGGAGCACCACAGTACATAAGACAAATGCTAACAAGTATGAAAGGAGAA Gene BVT0102_224935 - 1 EMBV3_01267 GK000008.2:89209456-89950479 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00010367 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00022064 TCONS_00198662 TCONS_00073692 TCONS_00056147 TCONS_00116799 TCONS_00250553 TCONS_00019991 TCONS_00098385 TCONS_00189806 TCONS_00165811 TCONS_00032587 TCONS_00197973 TCONS_00141355 TCONS_00031938 TCONS_00207228 TCONS_00250544 TCONS_00239410 TCONS_00141464 TCONS_00177994 25 XLOC_131641 XLOC_142855 XLOC_005918 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_012735 XLOC_120316 XLOC_045454 XLOC_033950 XLOC_070965 XLOC_153496 XLOC_010669 XLOC_058631 XLOC_115843 XLOC_100651 XLOC_018827 XLOC_119632 XLOC_085783 XLOC_018183 XLOC_125746 XLOC_153487 XLOC_146076 XLOC_085892 XLOC_107767 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_17018 AGCCAAGTCAGTCACCCTCCTGCGAGTATAGAGTCCCACGGTTAGCCTTCCTGTATTAGA Gene GeneID:516477|WDR20:XM_002696840:665_cdna Constitutive 0 NULL GeneID:516477 21 GENE WDR20 NULL WD repeat domain 20 EMBV3_17369 GCCCATGGCTGTTGGCGTTGTTCGTTTTTGTTGTCTGCGGCTCAGCTATCTTCCAGATCA Gene GeneID:613627|SERP2:NM_001113721:193_cdna Constitutive 0 NULL GeneID:613627 12 GENE SERP2 MGC127909 RAMP4-2 stress-associated endoplasmic reticulum protein family member 2 EMBV3_08504 GCTGCAGTATCTACAGAAGGTTGTCTTGAAGGCTTTGTGGAAGCACAGTTTCTCCTGGCC Gene BVT0102_217491 + 0 NULL GK000003.2:51565702-51745875 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173379 TCONS_00173381 TCONS_00173380 TCONS_00173382 TCONS_00173386 TCONS_00173383 TCONS_00173385 TCONS_00173384 TCONS_00173378 1 XLOC_104348 Coding TCONS_00173378 XLOC_104348 Coding Coding BRDT 3:51543970-51601070 j TSS128888 5294 1 TCONS_00173378_2 935 0.127313940309785 20 0.907634109178795 0.000478516712818818 0.000624218612075743 0.000430363601862502 5.97213708669599e-05 1.05273369494531e-09 4.64107452185645e-07 0.000208894521205022 0.000187007394102552 0.000363817969923039 0.00116358787207392 6.47294794714438e-08 0.000397670093278457 2.13927605874784e-28 9.93328857271051e-26 3.47964202578474e-74 0.000873405960368075 0.00115230986277498 0.00126092471016453 0.000393483713166165 7.64936405054749e-09 5.75556205828283e-09 0.000712556233657851 4.27549576106564e-05 0.00158275108919525 0.000271367213651904 1.59819936578231e-09 0.000230015554823997 0.000125255851379609 0.000518784530521061 1.7960133513288e-76 NM_001075852.2 BRDT Bos taurus bromodomain, testis-specific (BRDT), mRNA. 0.0 1572 99.89 0.164903664525878 XM_005271151.1 BRDT PREDICTED: Homo sapiens bromodomain, testis-specific (BRDT), 0.0 3342 84.60 0.550056667925954 TCONS_00173378_2 sp|Q58F21|BRDT_HUMAN BRDT_HUMAN Bromodomain testis-specific protein; 0.0 1405 80.04 0.993582887700535 1 coding 0 0 0 0 -0.23466325769576 0.0760150212006573 0.0259032637064958 0.682703513368738 ATTTATAGACTTTTCCTGCTAAGACCTCAATTTGTGTTTAAGAAAGGCAGAAAGAAATTACTGTAAAACATTGGAGTAACTTAAATCACCCAAAACGAAGGCATACATAATGAAACCACTTTTAGTACTTACATAGAAAAAGGATATGTACCTGTAGACAACACTAGAATATAAGGATTTGAAGCAGTTGAGAATGTCTCTGCCAAGTCGACAAACAGCTATTGTTAACCCTCCACCACCAGAGTATATAAATACTAAGAAAAATGGGCGATTGACGAATCAGCTGCAGTATCTACAGAAGGTTGTCTTGAAGGCTTTGTGGAAGCATAGTTTCTCCTGGCCTTTTCAGCAGCCTGTGGATGCTGTCAAACTAAAATTGCCTGATTATTATACCATTATAAAAAACCCAATGGATTTAAATACAATCAAGAAGCGCTTGGAACATAAATATTATGTGAAAGCTTCGGAATGTATAGAAGATTTCAATACAATGTTCTCAAATTGTTATTTATACAACAAGCCTGGAGATGACATTGTTCTTATGGCTCAAGCTCTAGAAAAGCTGTTCAGGCAGAAATTATCTCAGATGCCACAAGAAGAACAAGTTGTGGGTGGTAAGGAAAGAATAAAGAAAGGTACTCAACAGAATATGACAGTTTCTATTAAAGGAAAACAGTCCCCCAAAGCACTGGGAAAACTGCTTACACAGCAAGTAATTCCTTCTGTATTTCCTGAAACATCTGTTTCTCCTTCAAACCTGGCACAAGGTGCTCCACTCAACACTGTCTCACAAACAGTCACCCAGGTTACAAAGGGTGTGAAGAGGAAAGCAGATACAACAACTCCTACAACTTCAGGAGTTAAAGCAAGTGGTGAATCTTCCCCAACACTTACAGAAAAAAAATCAGGGAAAATGCCACTTATAAAAGAAAATATGCTAAAGAATGTTTTGCCGGATTCTCAGCAACAATATAAAGTTGTAAAGAATGCTAAAGTAACCGAACAATTAAGGCACTGTAGTGAGATTCTTAAAGAAATGCTTGGAAAGAAACATTTGTCATACGCATGGCCCTTTTATAATCCTGTTGATGTTAATGCTTTGGGACTCCATAACTACTATGATATTGTGAAAACCCCAATGGATCTTGGAACCATCAAGGCAAAAATGGATAACCAGGAATATAAAGATGCATATGAATTTGCTGCAGATGTTAGATTAATGTTCATGAACTGCTATAAGTACAACCCTCCAGACCATGAAGTGGTTACAATGGCAAGGATGCTGCAGGATGTTTTCGAAATGCATTTTGCAAAGATCCCAGATGAACCTGTTGAGAGTATGCCTGTATGTTACGTCAAAACAGATACCACAAAAACCCTTGGTAGAGAAAGCAGTAGTGAAGCTTCTTCTGAAGATAACTCTTCTGGTGATTCTGAAGATGAACGAGTTCAGCGTCTTGCAAAGCTTCAGGAGCAGCTTCAAGCTGTTCATCAACAGCTACAGGTTTTGTCCCAAGTACCTTTTCGTAAGCTAAAGAGAAAGAATGAGAAGTCTAAAAGGGAAAAGAAAAAAGAAAAGATTGATAACAGAGATGAAAATCCAAGGAAAAAGTTTAAGCAAATGAAACTAAAGGAAAAATCCAAGCGCAATCTGCCAAAGAAGAAGAAACCACAGGTCTTCACTATGAAATCTGAAGATGAAGATAATGCAAAACCTATGAACTATGATGAGAAAAGACAGTTGAGTTTGGATATAAACAAACTCCCTGGAGATAAACTTGGGCGAGTCGTTCATATAATACAATCCAGAGAGCCTTCATTGAGAAATTCCAACCCTGATGAAATAGAGATAGACTTTGAAACACTGAAATCATCAACACTGAGAGAACTGCAAAAATATGTTGCTGGATGTCTAAGAAAAAGATCACTAAAACCTAATGGTAAGAGAACAATGAAGTCAAGAGAAGAACTTCATTCAGAGAAAAAACTAGAGTTGGAAAAGCGGTTACTGGATGTCAATAATAAGTTAAATTCTAGAAAACGTCAAACAAAACCTGAGAAAACTCAATCATCCAAGGCCATTGGAAGTGGTTCCCGACTGAGTGAAAGTAGCAGCAGTAGCAGCAGCAGTAGTTCATCAGAGTCTGAAAGTAGTAGCAGTGATTCAAGTTCTTCAGACAGCAGTGATTCCGAATCAGAAATGTTTCCTAAATTTACTGGAGTAAAACAGAATGATTCTCCTAAAGAGAGATTACAGGTAAAGTCTTCTGTGCAAGATACAACCTCTGGGGTAACTAGCCTGGTTCATCAGACTGCATGTTCAAATGGAACACCACCAAACCACCACCAATTAGTGTTTAATCATCAAGAACCAAAACATTCACAGAGTGTGGAAAACATTTCACCTTTACAAATTCTGCCTCTTTTAGATGATTCTGAACAACTTCTGAATGGCCTAACTGTGATGCCTCAGTCCAGTGATAATGACACAGTGATGTTAGAATCAGAATATCAAGGTCAAGTTCCAGTGCAAAAGGATATAAAGATCAAGAATGCAGATTCTTGGAAAAGTTTAGGCAAACCGGTCAAAACATCAGGTGTACTGAAATCATCAGATGAGCTCTTCAACCAGTTTAGAAAAGCAGCAATAGAAAAGGAAGTAAGAGCTCGAACACAGGAACTAATACGGAAACATCTGGAACAGAATACAAAGGAACCAAAAGTATTTCAAGAAAATCAGAGGGACCATGGCTTCACTCTAGAATCTTTTCCAAATAAAATGCAAAACAAGTGTCTTGAAGAAGAACAAAAAGAAGATCAGCAGTCACAGGAAGCTCAAGATAAAGACAAACTGTGGCTTCTGAAAGACCGAAATTTAGCACGGGAGAAAGAGCAAGAGCGGAGGAGAAGAGAAGCAATGGCTGGTACCATTGATATGACTCTTCAAAGTGACATTATGACAATGTTTGAAAACAACTTTGATTACAACTCAGTTTTTTGATTAACCATCAACTTAAATGAATTATAAAAGATTAAAAAGCAAATGGGAGTTGTCCTTAAATGGAGTTCAGGCCTCTTTTTGGAGTATAGGGCCCTTTTGTAATGTAAATAATGTTTCAATGAGCCATGATTCTGCCTGGGTTTCTTTAAATGACTGTGTGGCAAAATGTGGGGCCTACAAGCAGGGTTGTTTTGTTTTGTTAATTTATTATTTTATTTACTTTTAAAAATTGAAGTATAATTAATCTTTAATACTGTGTTAGTTCCAGGTGTACAACATAGTGATTCAATATGTCTGTATATTACAAAATGATCACCATGAGTTTGTAACTTTTAAAACAGATATTTGTCTGCCTTCAGAAATATTTAGAACCTCTAACAAATAACACCTGGTTTCTTGGAGTGTCAGATTTCATAAGGTTCTCCATTGGTTCTATATTCAAAATTTATATTTATTATCTATGGTTTGAAAGATGTTAAATTTGAGACAAAATAACAGTGAATATTAATTATGTATGTGTCTAAGAATCTATACATTTCTTAATATGCATGTGATAGCAATGGATGTCTAAATTTTTACTTAACTATACTAAGTATTTAAATCTGTGAAATATTTTGTTTCATCACCCTCAAGTTGGAATTATGTATAAATTATGTATATCAGCTTCATCTATTTTAAAATTTGGACTCTTGTAACATTCAGGCACTATTCCAGTATCATCTAAAGTGAAAATTCGAAGTGTATATGTATTATAGAGAGAAAGAGAAAGTTTTCTTGGCTTTATTTATTTTTATAATCAATATGATAATTTTTTGAAATATCTTTAAGCTGTCAACCATTTTAAAAATATGATTAACTCGAGGCTGAAATGGTGGTGATACCTTCATGAAACAGCCAGAATAAAAGTCATAGTCATACATATTATACTATATTTTTAACCAAGAAATTAATATGTATATATTAAACAGTATACATTGTTATTTTCCTAAAAGAGCATATGGACTTATCTATATATTCTAATTTATATTTCTATATAGTCTAATTTATATATATATATAGTCTTAGATACATCAGAAATGCATAGTGGTTACCTCTAGGTGATGGGGTTATAGGGTTTTGTTTTGTTTTTTTCTTTTTCTTTAGACCTTTCAATATTTTCTGGTTCATTTAAATATTTATTATGTAATGCTTTTAAGATCTATGGGAAATTTTCCATTTTGAAGAGAATAAAAATACTAAATAAGAATTTACTCTGTCAAATACACATTAACTCTTTTCAACAACTGCCTTTAAATAATAAAAAATTGCTCAGTGAATGATTTTTGTCTACAGCTAAAAAGAAAGTTCAGCTTCATTAATATCCTTTTACATTAAATGGTTTACTTGAGGTTTTTCTATAAACCTTTGGAACATCCCTTATAGAGAGCTATGTTATGGTTATCTTTTTAGTTTAACCAATTTAACATTTTAACCTTTGCTCAATCAGTAAGAGATCTGGCACATTATAGATAGTCAACAGAATTTTGGTAGGCTTAAGTCAGTTTTGCAGAGAAAATATTGATGTATAACTAACTGATCCTTCCTCAGTTTGTACATTATTTCTTAGTAAAAAAAAGCTTGACTTCTTTTAACTTCTTGCATTGGTTTTACTTGTTAACAACATTATCTATATAATCAACCTTTTTGCTTTATTTTTCCTCTTTTTTTCTTGAGTTGTTCTCGAAGAGTGGTCCACGGACCAGCTTCATCAGCATCATTTGGGAACATGCAGATTCTCAGACTTAAGACTCACTAAATCAGAACCTCTGGTATGGGGGCCAGCAACCTATAGTTGAACAAGCCCTCCAGTGATACTAATACACGCTGAAGTTTGCGAACCACTGCTCTAACTGAATCCTGGCTGTCTCCTGCAGGCTGTCACTATTAGCACCTATTTTTTCACTAACAGTTTTCTTCCCTTTGTAGTGTTCAGTTCAGTTCAGTTCGGTTCAGTCGCTCAGTCGTGTCTGCCTCTTTGCGACCCCATGAATCGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAAACTCATATCCATCAAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTCATCCCCTTTTCCTGCTGCCTCCAATCCCTCCCAGCATCAGAGTCTTTACCAATGAGTCAGCTCTTCACACGAGGTGGCCCAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAACACCCAGGGCTGATCTCCTTTAGAATGGACTGGTTGGATC EMBV3_26097 TCCCAAAACCCTTGTTGAAACAGCCAAGGAAGCCAAGGAGAAGGCCAAGGAGACGGCACT Gene GeneID:523609|PRELID1:NM_001038138:32_cdna Constitutive 2 NULL GeneID:523609 7 GENE PRELID1 MGC134414 PX19 PRELI domain containing 1 EMBV3_20070 GAACAGACTTTTGGATGAATTGTGTTTGGGAAGAGGTGATGTCCAGGCCGACTCCTTGAG Gene GeneID:540922|ZC3H7A:NM_001105430:258_cdna Constitutive 0 NULL GeneID:540922 25 GENE ZC3H7A NULL zinc finger CCCH-type containing 7A EMBV3_07297 GATCTACATCACAGTCCGAAATCCCCACTACAACCCGGGGGACAAAGATACCAGAATTGC Gene GeneID:281553|TSHR:NM_174206:76_cdna Constitutive 0 NULL GeneID:281553 10 GENE TSHR NULL thyroid stimulating hormone receptor EMBV3_00650 TTTAGGGAGCCCAAGTTCTTTGGGGCAAGGTGAGTGCTTCTGTAGGGAGAAGAGGCACAT Gene GeneID:788087|MCL1:NM_001099206:181_cdna UTR3_Alt 2 NULL GeneID:788087 3 GENE MCL1 MGC143362 myeloid cell leukemia sequence 1 (BCL2-related) EMBV3_24282 ATGATAGCTTTGGTAGCTTTAAATCCTAAAGTTCGATATTGGACCTGCCAGCATCCCTCC Gene GeneID:531505|MYL12A:NM_001015640:140_cdna UTR3_Alt 3 NULL GeneID:531505 24 GENE MYL12A MGC139901 MRCL3 MRLC2 MYL9 myosin, light chain 12A, regulatory, non-sarcomeric EMBV3_08766 GTCCTATGATACTACCTTCCTACTGGACCATGTGGAAGTAGCCTATGTTTGGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_01387 TCTTATTTTTTAAGAATATTTGATATCAAGACCTGTCAAGTTGCTCTTAATTTTGCCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14768 AATTTGATAAGAATTTCTCAGCTCACCTGCTCGACCTCCTGGCCCGGCTGAGCGTCTACA Gene GeneID:781376|TUBGCP2:NM_001098149:261_cdna Constitutive 0 NULL GeneID:781376 26 GENE TUBGCP2 NULL tubulin, gamma complex associated protein 2 EMBV3_20716 TCTGGTCAAAATTATCTGAGATGCTCCCCTAAATTCCTGCCCTCTTTGTTGTTCAGTCAC Gene BVT0102_049538 + 1 EMBV3_24590 GK000011.2:60942372-61117072 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27208 AAGTGTGGGGCGTCTGGCCAAATGTGAACCTCCCTGGACCTTCATCAGATTTGTGAAACT Gene GeneID:615252|NOL12:NM_001046557:97_cdna Constitutive 2 NULL GeneID:615252 5 GENE NOL12 MGC137139 nucleolar protein 12 EMBV3_19197 CTTCAAGAATGACCGCAGCCGAGCCTGGCAGAACAACCTGCATCGGGTCACCAAGTTCAA Gene GeneID:614570|EIF4E1B:XM_002689011:59_cdna Constitutive 1 NULL GeneID:614570 7 GENE EIF4E1B NULL eukaryotic translation initiation factor 4E family member 1B EMBV3_32207 GACCTGGGGAAATGGTCAGACCTTGTATTGTGTTTTTGGCCTTGAAAGTAGCAAGTGACC Gene GeneID:281032|BTG1:NM_173999:17_cdna Constitutive 0 NULL GeneID:281032 5 GENE BTG1 NULL B-cell translocation gene 1, anti-proliferative EMBV3_11228 CTGTATGCTGCTTTCTGTCTTCACCACTCTCCTGTATATTATGCTCAGACAGTTGGCACC Gene GeneID:664648|TAS2R4:NM_001046635:736_cdna Constitutive 0 NULL GeneID:664648 4 GENE TAS2R4 T2R4 taste receptor, type 2, member 4 EMBV3_18545 TACCTTAGAAGAATGATTAAGATGCTATTTCCTATTTACAGAATGAGATAGTTGATTAGG Gene BVT0102_299965 + 0 NULL GK000002.2:47999636-48282733 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16826 GCGATAAATGCAAAACAGTAGCTGTTGGAGAAGGAAGAATGTTCTTCAGAAATGAGGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01484 CTCTGCTTCCTGCGAGCTCACTGATGCTTAATGTTCAGCAGTTCTGGCTAAGAGGCTTCT Gene GeneID:614471|UBE2G2:NM_001076328:75_cdna Constitutive 2 NULL GeneID:614471 1 GENE UBE2G2 MGC140569 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) EMBV3_02213 TGCCTTGAATTGTCTAGGGTTGTTGTGTACTTAGAAACTAACAGCTCTAAGTACCTTTCC Gene GeneID:408000|SEPT7:NM_001001168:39_cdna Constitutive 3 NULL GeneID:408000 4 GENE SEPT7 CDC10 septin 7 EMBV3_05387 TGTATATGACAGGATGCGTGTGTCCCGGGATGCCCACCTGATTTGTACATATCGCGTTTG Gene GeneID:540954|RGMB:XM_002689413:59_cdna Constitutive 0 NULL GeneID:540954 7 GENE RGMB NULL RGM domain family, member B EMBV3_08423 TCCTCCCAGCCATGCCACCTGGATGGGAAAATCGCCAGTGTTCTGACATCTCGGAGCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35236 GAGTCTGTGAAGATTCGGGGAACCGTTGAGAATAAGGTCCCTGGCCTACACTCTCCTTGA Gene GeneID:505455|IER3:NM_001075202:60_cdna Constitutive 0 NULL GeneID:505455 23 GENE IER3 MGC140531 immediate early response 3 EMBV3_16864 CCCCAGACCCCCTTTTGCTCTGCATTAGAGAGGCCCCGGTGCTCTCGTCAATCTGGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41207 CTCAGAAGAGAGAGCTGAGGTGGCTGAGAGTATTCCACCAAAGAAGATAAATATGAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33082 AGCTGTTGCCATTGCCCATGTGGGAGGAGATGAGGGACTGGACCAGGTTGCTAACAAGTT Gene BVT0102_352475 + 0 NULL GK000003.2:19512107-19530665 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168913 TCONS_00168915 TCONS_00168914 TCONS_00168912 TCONS_00168910 1 XLOC_103228 Coding TCONS_00168912 XLOC_103228 Coding Coding RFX5 3:19505740-19515754 j TSS126579 7048 1 TCONS_00168912_5 615 0.366770715096481 10 0.297113752122241 0.00127819744050374 0.0001314328445894 0.000453637362146479 0.000628632652720479 0.000658905161662197 4.71589142615617e-10 7.11208163773574e-06 0.000430899171827778 0.00149762505267653 4.04726628859998e-05 0.000137212708981239 1.75701394929891e-12 0.000173721690133032 2.50744804764415e-09 1.99798561380547e-10 0.000365584555281189 5.87959127137813e-12 0.000345699254926685 0.000882903510035951 2.03765449812825e-06 1.50705066363651e-08 2.31678326032616e-05 1.15212720226055e-05 7.1185688146366e-05 2.08635934255873e-05 0.000427602435816891 4.59324700905706e-10 5.28334725293143e-05 2.01778621910771e-06 1.17840751617916e-06 NM_001205726.1 RFX5 Bos taurus regulatory factor X, 5 (influences HLA class II expression) (RFX5), mRNA. 0.0 6125 99.97 0.482264472190692 XM_005245405.1 RFX5 PREDICTED: Homo sapiens regulatory factor X, 5 (influences HLA class II expression) (RFX5), transcript variant X1, mRNA. 0.0 3234 80.96 0.480845629965948 TCONS_00168912_5 sp|P48382|RFX5_HUMAN RFX5_HUMAN DNA-binding protein RFX5; 0.0 980 87.50 0.998373983739837 2 coding 0 0 0 0 -0.000431710742930358 0.996677166777231 0.052654496408251 0.326960309744023 ACGAGCCTCATGCCAGGATGGCAGAAGATGAACCTGATGCTAAGAGCCCAAAGACTGGGGGAAGGACTTCCTCAGGTAGTGCTGAGGCGGGGGAACCCACCACCCTTCTTCAGAGGCTCCGAGGTACCATTTCCAAGGCCGTGCAGAACAAAGTAGAGGGGATCCTGCAAGATGTACAGAAATTCTCCGACAATGACAAGCTGTATCTCTACCTTCAGCTCCCCTCAGGGCCCAGTACTGGAGACAAAAGCTCAGAGCCAAGTACACTCAGCAACGAGGAGTACATGTATGCTTACAGGTGGATCCGCAACCACCTAGAGGAGCATACCGACACCTGCCTGCCGAAACAAAGTGTTTATGATGCCTATCGGAAGTACTGCGAGAGCCTCGCGTGTTGCCGCCCGCTCAGCACAGCCAACTTTGGCAAAATCATCAGAGAGATCTTCCCTGACATCAAGGCCCGAAGGCTTGGTGGCCGGGGCCAGTCCAAATATTGCTACAGTGGCATACGAAGGAAGACCTTGGTATCTATGCCGCCCTTGCCCGGACTTGACCTAAAGGGCTCTGAGAGTCCAGAAATGGGCCCAGAAGTAACCCCAGCGCCTCGGGATGAGGTGGTAGAAGCAGCCTGTGCCTTGACCTGTGACTGGGCTGAGCGAATCCTGAAACGGTCCTTCAGTTCCATCGTTGAGGTTGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTGCACACGCCCATGTGCTCAAAACTGTGGGACTCGCTGAAGAGGACGAACATGCCCCTCGGGAACGGTCATCTAAATCCAAGAACGGGGTAGAGAACCTGGAGGGCGGTTCTCATAAGAGACCAGAGAGACAGGTCCAGCCTCCTAAAGAGCTAGACCCCCGAGCTGGGGCTGGCCCCTCTGCACGTGGAGAGAGAAAGAAGAGTGTAGCGGAGAGCCCGGCGCCAGTAGCCAATAACCCGCAGGTTAATGCCCTAGTGGCACGGCTGCCTCTGCTCCTCCCCCGGGCCCCTCGCTCACTTATTCCGCCAATCCGAGTCTCTCCACCCATCTTGGCCCCCAAACTTTCTTCAGGCACTCTGAAAATGGCTGCACTGCCTCTGCCCAGTAGGGCTGGGGGACCCCAAGCAGCTGTTCCCATCATTAACATGATCTTACCAACGGTTCCTGCTTTGCCTGGACCTGGACCTGGGCCTGGGCAAGCTCCCCCTGGGGGGCTCGCTCAGCCAAGGAGTGCAGAGAACAGGGAAGTGGGCATAGGGGGTGACCTGGGACCCCATGACAAAGGTGTCAAGAGGACAGCTGAAGTGCCTGTGAGCGAAGCCAGTGGGCAGGACCCACCAGCTAAAGCCACAAAGCAGGATCTAGACGATACAGGAAGTGATGCCAAAAGAAAACGGGGGCGCCCTCGAAAAAAATCAGGTGGAAGTAGGGAAAGGAATTCTACCCCCGACAAGTCAGCAGCTGCTGTGGACTCAGCCCAGTCCTCAAGGTTACCACGGGAGGCATGGGCCTCTGGAGGGGAGAGCAACTCAGCTGGAGGATCAGGGGGGCCAGGGCCAGTAGGAGAGGCTGAGAAGGGGGTGCTTGCCCAAGGTCAGGAGGATGGCGCCGTTTCCAAAGGAGGAAGGGGCCCCAGTTCCCGTCATGCCAAAGAAGCAGAAGATAAAATTCCTCCTGTCACCCCCAAAGTGAGCGTCATCAGGGGCAGTAGAAGCCAAAAGGAGGCTCTTCATTTGGTCAGGGGAGAAGTAGACACCTCCGCACAGGGTAATAAAGACTTAAAGGGGCATGTGCTTCCGAGCTCCATTCCCCATGAGCGGAAAGACCCCAAAGCGGCACCCCCATGATAGGTATGTGGGAAGGAGTGTTTATAGCCCTATGTTAACTCTACCTGGCTGCCTAGAAGAGGCCCTTCTTTGCACTTCTCACTTGGCTCTTCATTCTCTTCTGTATAGACAGCTGAGGCACCCTGTCTTACATAGTGCCTGATTTTTGCCTCTCACCTTTCCAGCTCAGTCCCCTTGGCTTTAGAGTCACTAATCTGTAGTGACCCCTCTCCTGGATCCCTGCACTATCTTGTGGGAATATAGGGATGAAATACGATGAATGCCTAGGCTTGGAGTCTTTTGGTTTTAAATCATAGAAAACCTAACTCAGACTGGCTTAAAAACAAAGATTTATTGGCTCATGTGACTGGCAAGTCCAGAGGTAGGGCCAACTCCAGGTAAAGCTGATCCAGTGACTCCGTAAGTCTCTGAATACCTGATTGATTTTCCCCCCTACCTTCTGTAGGATCATCTTAAGCCTGGTCCACCTCGTGGCTGCCAGCACTCCTGGGATTCCATGTTTCCTCTCTCATGTCCAGCCAGAAAGAGAGGGCATCTTTGTGCCAGGAATCCTAGCAATAGCCCTAAGATTCACTTCGGTGAGGTCAGCCTGGGTCACACACCCATCCCTAGCCAGTCACTGTGGGCAGGAGATTGGTATAATAAATGCTAATTTGCTTATTTACGCTACATCATGGCCTGTACCTTTTGAAAAAAAAAGGCAGGATCTGCCTCCTTAGAATCACATAGATTCCTCAATGGGGACTGGGAGTGCGGAGTTCCCGGGGAGTCACCTGACACCTGGCCACTGCTATGAAGTAGGTGTGGTTTTAGCTTGCTAGGCTGAGACCAGTTATCTTCCTTCCTTTTTTTCCAGATAGTTTTGAATTTTCCTTACAGCAGCTGTAACCTCTTTTCCTCTTATTCTGGTCTCAGGGAATGAGAGGGAAATCTTTCTCATTTGGAGACTAGCTCTTTAGTCTCATTTGGATAACAATCCCCCTTTTTCTTCCACCTCCTTCTCAGAGATGGGTATCCTTCATTCTCCTCTTTCTGAATTTTAGTTTTCTCCTCATTCTCAATGCTTCACTCTACTGCCTCTTTCACCAAGTAGAGTGAGGTTTACTCCCTAGTCATTTTATTAAATTCACTCTGTATCCACCAGGTGTCAGTCTCTTGTCATGTAAGTGTCAGGACTTAGCTGGACCGGGATTGTGGGTTTAGGCTGTGTGTGTGGAAGAAGGTACCTTGCCTATCTGGGAGCACCAGTAGGAAAGGAATTCAGGTATATATTTGGGAAAAGCAGTAAACCAACCAACATTAATTAAGGACCTACTTTATCTTCTGCATAGGGTAGCTTCCATCAGGGATTCTCCATTTTCTTTCAGGGAGCCTTCATTCATTTGTTCCTTTATTTCCACCATTGCAGATTTTTAAAAATTATATGTAATGTTTGATATCTATAAAGAATATATTTAACGTGAATAAGTTATGAAGCATAATAACTAAATGACTCATCACCCAATTTGTACATTAAAACATTAGAAATACTACTGAATTTCTCGTGTTCTTCCCCTAACCTATGCTCCTGGCTCTCCCTAGAGGTCACCACTATCTTTAATTTTGTGTTTATTAACTACCTGCAATATATACATACATACATATATATATATATATCCTTTCCATTTATGTATATACCCTTTAAAAATGGTTTTGCTTTTTAGCTTTACAAAATTTTATTCTCTAATACTCCCCTGTGGTTTGCTTTTTTTTCCCCACATAACATTATTTCTAAGATTCATCCATGTTGTAGATAGCTATTACTCACTCATTTTTATCTATATAATATTGCAAGTGCATAAACCACAATTTATCCATGTCAGTGGACATTTGGGTTGTTCCCAGTTTTTTGCAGTTATAAATAATGCTGCTACTAACATTCTTGTACAGGTTAGTGCCTTTGTTTTTAGTAAGCTTTCTAAGGCTTCTGAGATGATTCCTTTGGTCTGTACACCCTCTGAGTTGGAAACTGTTCCCTCTTGTCTCATTCTCTAAAAACGTTTATATTAGATTGAACTGAACCATCCTTTGATCGTTTGATAAAACTTACTTGGTAAGCCATTTGAGCCTGGCCTTTCTTTGTGGGAAACATCTTAATTTCAATTTATTTAATAATTATAGGCTATTTGGGCTTTCTATTTCTTCTTGAGTCAATTTAGGTAAAGTGTTTTTCTAGAGTTTTGTGCATTTTACATCATTTATTTTTAATGAAATTCCTTCCATGTTCTTTTTCTCCTTTGCTCCCTGGGTGGTCGTGTCCTCCTTTTCATTTCTGCTGTTTACTTGTGCCTTCTTTTTTTCCCCTTTGACCAACTACACCAGAAATTTGTTTTACTTGTTTGATTTAGCTGCCATTCTGGGCTTTGTTGATACTCTCCCTTAAATATTTGTTTTCTACTTCATTAATTATGGATGTTATCTGTGGTATTTCCTTCTGCTTTCTTTAGATTTAATTTTATGTTCTTTTATATCAACTCTTTGCGACCCCATGAACTATACGGTCCGTGGAATTCTCTAGGCCAGAATACTGGAGTGGGTAGCCTTTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCAAACCCAGGTCCCCCGCATTGCAGGTGGATTCTTTATCAGCTGAGCCACAAGGGAAGCCCAAGAATACTGGAGTGGGTAGCTTATCCCTTCTCCAGGGGATCTTCCTGACCCAGGGATTAAACCGGGGTCTCCTGCATTGCAGGTGGATTCTTTACCAACTGAGCTATAAGGGAAGCCACAAATATTTGTTTTCTACTTCACTAATTATGGATGTTATCTGTGGTATTTCCTTCTGCTTTCTTTAATTTTATGTACTTGTACATCTTAATTTTTATCTAATTAATTTTCAAGTTGTGTTATTTTCTATAAGTTTTCAAGGACTCACTTCCCTATATTCTCCACATTTTTCTGTTTAAAAGTATTTATTACTTAGTTCTAAGAATATTTAAATTACCTTTATGACTTTTTGGATTTGTGATTTAGAAAGTTTTCTAAATTTCCAAAATCTAGCTATTTAAAATTTTATCTTTTTGATACTAATTTTCAGTTTGATCATTTGTGCTCAGGAAATGTGGTCTCTGTGATAGCAGTTCTTTGAAGTTTGTCAGGATTGTTATTTTTATATTCTGGGGCTTCCCAGGTGGCTCAGTAGTAAAGAATCTGCCTGCCAATGCAGGAGATGCAGGTTCGATCCCTCGGTTAGGAAGATCTCCTGGTGAAGAAAATGGCAACCCACTCCAGTATTCTTGCCTGGAAATTCCCATGGACAGAGGAGTCTGGCAGGCTACAGTCCATGGGTTCACAAAGAGTCAGACTCAACTTAGTAACTGAACAACAATTTTATATTCTGTAACTTACCTTGGATATCTACCTGTTCTGTTGATTTCTGCTGATTTTCCCATAGCAGCTTGTTCCCTGGTATATTTTGTATTTTTGGATTTTGAGCTCCTATTTTGTTAATCTAAGGAAATCCAGTGGGCCTAAATTGGGGGTACTTTCCTCTAGAGAGAATTTGCACTTGTTTCTGCCAGGTGACAAAGGGTGCTCCTTACCTGGGACTGTGTTAACCTTTCAGGAGTCCTGATTTAACTCAGGAGTCCCAGATTTTCTCCCCTGCTTTGGCTGGGCCCAGGGTTTAGCCTCTGTTAATGATACTGATACTAGCATTTGTCCCCAGAGCAAACCTGCTTCTTCTGCTGCATGTTACTCATTCTGCATAAGGATTCAGCTCAATGTTATTTTTTCCCCTTCCTTCAGTGATCTCTTCTACTTTCTGATGAGCGTGACAAACATGTTTACTGTAATTTATCCAGGATCCAGTGGTATTCTGTGAGAGAGCCCTTTCTCTCCTCCATGCTGCCAGAAGTAGAAGTCCATTACTGTAGTTTGGCATTTTCCTTCTTGTTAAGAGCTCTGCACTTGTTGGAAGCTAGCTGACTTAGCACTATCCTTAAGTCAATAATGATTTCAGCACAGTGTGAGTTATGTTAGCAGTAAGCACAGAGAGTGGTGGGAGCCCAGAGAAATAGACAGGGATCAGAAATGACTTGCTAGTAGAGGTGAGTAGGACAAGGCCAACTCATAAAGTAAGGACAGAACAACAGAAGACATGATACAAAGAACTGAATCATGATACCCATTCTGCTGCCTAAGAGCTGTAAATTCAAAGAGATTGAGTAATTTGGGAAGGCTTCTTGGAAAAGGTAGCCTTGAGTTAAGCCTTTAAGTAGAGCTTAAGTAGATTAAAAAAAAAAAAAGTCATTCCAGGAAAAGCAGGAGTTTGAGGATGTGGGATGTGAGTAAGGACATGGCAGTCTAACCCAGTAAAAAGACCTGTTCGGCAGAAAGGTTATGTATGAACAAGAGAGAGAAATCAACTGGAAGAAAAACACACAACAGTTGAATGAATGGGTAAAAGTTATCCAGTGATGGAATTGAAAGTAATCCATTGATTGAATGAATGAAAGATACGAAGTTTGCATTAGAGGATGGAGGAACTGAAGTAAAAAAGAACCCTCCAGACAGCTGTTGCCATTGTCCATGTGGGAGGAGATGAGGGACTGGACCAGGTTGCTAACAAGTTGGAGGTGATAGGCATACGGAAAAGTAAACCACTGGTGATACGATAGAAGCTTCCAAGGGAACAGTGCCCTCACCACGATTGGGTTTGGGGATATATCCATTCACTTTAGGAGACCAGACCACTGGGTGATTTTAAGATTTACATGAATGTTATAGGGGTTTTAAGTAGCCTATTTTATATTTTTACCCTAATATTTTAAAAATCTAACATGAAACAAGTTATTCTTCTCTTGGTCAGGAAGTCTTCAGTTGGTTAGATGAAGGGCTAAACGAAGGTTTTGGGGACTGCCTACTGCTTCCTCTCTACTATTCCTTATTCTCTCCCCAATACCCTGTTCCCCAGTCCCATTGTTGTCTTTTTTCATTTTAGCCTTAGCATAAAGTAAGTCAGAAATAAAAATTTGTTACTTACTAAAACTTGAAATAATCTTTTGCTGTTAAACCAAGGTAAACTCTATGTCTAGTCTGTGGCCTCAAATAAATGAATGTATTGTTAACTTTTGTAGGCAACAGTCAATTTTCTTAAAAACAACAAAAAAAAG EMBV3_41091 TGCAGCACAGGTTTTTTCTCCAGCTCCCTACCATCATTTACCATCTGATGCCGATCATTA Gene GeneID:618573|RALGAPA1:NM_001083525:59_cdna UTR3_Alt 2 NULL GeneID:618573 21 GENE RALGAPA1 GARNL1 MGC142841 Ral GTPase activating protein, alpha subunit 1 (catalytic) EMBV3_40662 CAGGCCCTTTCTGTGACTCCGAAGCCTCAAGTGTCAGTGTTTGCAGAGTCCAGTGGCTGA Gene BVT0102_087261 + 0 NULL GK000017.2:73239875-73241608 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076325 TCONS_00076328 TCONS_00078265 TCONS_00078266 TCONS_00076327 2 XLOC_046790 XLOC_047265 Coding TCONS_00076325 XLOC_046790 Coding Coding SMARCB1 17:73222603-73241547 j TSS57315 3330 1 TCONS_00076325_2 376 9 0.824684580055957 0.000271898797049417 0.000187958326039108 0.000917062941200773 5.10022339521557e-05 0.000285730900376531 9.55339362255797e-05 0.00021736612673216 8.61118793123157e-05 5.66857586371871e-05 5.59124298833133e-05 6.93947841024056e-05 1.04051671280176e-05 3.35738523901169e-05 2.98068260180556e-26 0.000899439621132317 0.000943602692391566 0.000134097609901417 0.00120877141462255 1.72191081969819e-08 1.48933948908877e-08 1.21791637250768e-33 8.25863099224167e-14 0.000222804654186235 0.000391551202211785 0.000194691865303642 2.32745429715512e-08 0.000135717785747065 4.95237422801549e-05 3.8369519702513e-05 0.000170055749638823 XM_005218239.1 SMARCB1 PREDICTED: Bos taurus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), 0.0 2962 100.00 0.492792792792793 NM_001007468.1 SMARCB1 Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript 0.0 1934 85.80 0.490990990990991 TCONS_00076325_2 sp|Q12824|SNF5_HUMAN SNF5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; 0.0 781 97.66 0.997340425531915 1 coding 0 0 1 1 -0.121488942910291 0.337403957745814 -0.0104769028368129 0.819655776857043 GCGCGTCAGCGTCAACGCCCGCGCCTGCGCACTGAGGGCGGCCTGCTTGTCGTCTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGAAGCCCAGCGGCGGCGCGAGCGACCCCGGCCCGGCCCGCCCTTCGCCTCCCGAGTCGGCTTCCCCGGGCTAGGAGCGTCCCCGGCCCCGCCTCGGCCCTTCCGATCCTCGCAGCCCGGCCGTGGCCGCCCGCTTCTGCCGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTCAAGTTCCAGCTGGAAGATGACGGCGAGTTCTACATGATCGGCTCTGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCGCTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCACATGATCATGGATACACGACCCTGGCCACCAGCGTGACCCTGCTGAAAGCCTCCGAGGTGGAGGAGATCCTGGACGGCAACGATGAGAAGTACAAGGCCGTGTCCATCAGCACCGAGCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGTGGGTGCCCACCCTGCCCAACAGCTCGCACCACCTGGACGCCGTGCCCTGCTCCACCACCATCAACAGGAACCGCATGGGCCGCGACAAGAAGCGGACCTTCCCGCTCTGCTTCGACGACCACGACCCAGCCGTGATCCACGAGAACGCGTCCCAGCCCGAGGTGCTGGTCCCCATCCGACTGGACATGGAGATTGACGGGCAGAAGCTGCGGGATGCCTTTACCTGGAACATGAATGAGAAGCTGATGACCCCGGAGATGTTCTCAGAGATTCTCTGTGACGACCTGGATCTGAACCCACTGACGTTCGTGCCAGCCATTGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAAGACCAGTCAGACCAGCGCGTCATTATCAAGCTGAACATCCACGTGGGGAACATCTCCTTGGTGGACCAGTTCGAGTGGGACATGTCGGAGAAGGAGAACTCGCCCGAGAAGTTCGCTCTGAAGCTGTGCTCCGAGCTGGGGCTGGGCGGGGAGTTCGTCACCACCATCGCCTACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGTGAGAACCCCCTGCCCACGGTGGAGATTGCCATCCGGAACACAGGCGACGCTGACCAGTGGTGCCCGCTGCTGGAGACCCTGACGGATGCAGAGATGGAGAAGAAGATCCGGGACCAGGACCGGAACACAAGGCGGATGAGGCGTCTGGCCAACACGGCCCCGGCCTGGTGACCACCCCGTGGCGCTTGGCTCCCAGGGAGCATCTGGAGATCGGCCCACCTCTCCTCCATCTTCTGGCTCGGAGGGGACCAGGTGGGGGCAGCCCGGCCGTCCTGAGGAGCGGGCCAGGGGCCTCCTGGTCCCCCGCCGCCGGGGACACATTCCGTCTGCTGAGCCCCAGTCCCCACCGCCCGTCTCTGGTCAGGAGAGGCCACGTTGAGCTGTGTTTGTTTTTTGTATAGAAGCCCCCGGCAGGGCAAGCAACACTTTCTAAATAAAAAGGCAACAGGTTCTGTTTCTTCAAAGTGGTAGCATGGAGCTGAGAACGGGGGACAGCATGGCATGGGCTGGCCCCTCGCCCTCCGGCGCGCACGTCCCAGCTGGGCCTCAGCAGGGCTAGGGCGCCACTGGACCCCCCCACCCCCACAACCACGAGCAGGGCCAGGGTTCAGCTCAGGGCTCAGCCCTGTGGACCGCCCCTCCTGCCCCCACGAGCAGTTTGACTCCCCTCGGCGTCCCACCTGCCCAGCTCAGCAAGTCCTTGGAGTCCCGGGTGGCTGGGAAGTAGTGGGGCGCAGAGGGCAGGGCCACCTGTCAGTCCCAGCCCAGCCCCCAGCCAGGAGCGTGGCTTCTCTGGCCCTTGCAGGGGCCCATCCCGTGCGGGCACTGCTGGTGGGCCTGTGCCCACCTGTCCTGCTGCAGCTGGTGGGCACTGCTCCGGCCGCACCTCCCAGCACCACGTGCCTGACAGGAGAGCTGGGGCCCACCTCCACCCGCGGCTGGTGCTCTGGCAGGGTCCGGCGCCAGCTCACCGGGTGACCCTGCATCTTCTGTGACATGGACGGGTCCCCACGTGACCTGGACGTGGCACCTAGGAGGGTGGCACCTGGGTCTTCCTCCTGGGACCAGGCCCCGCAGGTGACCCAGGCCCAGTTGCGTTAAGCCCGTGGGCCCGGGCCCTGCACCTTCCGTTGCTGGCAGGGCTGAGGGTTGCATAGCAGGGGCCTCACACCACGAGGGGCAGAGCTCCAAGGGTTTCCAGTTCGGGGGTGGGCTGAGATGGGCCTCGCCCCTGGGCTCGGGGGTCTCGCAAGCACATCCTAGGAACTTGCGCTCCAGCCTCTGCCCTCCATACAGGGCAAGGGGACAGCGGGGCTTCAGAGAGGAAGGTTTCAGGCCCAGCTGGCCTCACGGACACTGGGCTCCACCACTGGGGGAGATGTTCCGGCCACAGCAGGAGGTAGCCTGAGCCCCAGAGCCAGTGGGGGATGACACTGCCTGCCTTCCCTGCTGGCCAGGCGGCACCTGCCTGGAGAGGCCCGGGGAGGGGCCTTCACCTGCCACCCACTGCGGAGCCCGCTGCTGGGCCAGAGGTTTCATGACAACATTAAAGTCCAACTCCAGAGCGAGTACTTTTATCCTCTGTGAAAGGGACAGCCGGCGGCGGCTGGTGCCGACCCAGGAGTAAACCACTGTGCGGACTGGTCCTCCAATGCCCGTGAGCTGGGGACCAGGTGAGGCTCCTGCCGGCCTCAGCTGCAAACGGCAGGGGCAGAGCTTCGCAGAGGCCTCTGCCTCAGCCACTGGACTCTGCAAACACTGACACTTGAGGCTTCGGAGTCACAGAAAGGGCCTGGCCCTCTTCTGCACCTGGCCCGTCCTTCAGTGGCCTGGCTGGGAAATGAAGCAGAGGTCCCCTTGGGGGTTGCTAGTTCGGGACAGGAGGGCCCCCACGGCCAAAGCTCAGCACAACCCAGCATCCCAGTCCCAGCCCCGCCCCTGAGATGTGAGCCCCATCAGTGGAAGCTGAATTACGGCACAGGCAGGGCAGGGATGAGAACCCCAGCAGGGCTGCCCTCTGTGCTCAGAGTTCTGCTGGCGAGTGGGCAGGTTCTGGACCCTCTCTGGGCCTCCAGCTGTGCCAATGTTCTGGGTCGGAGAGCACGTCAGGCTTGGTGGCCCTGGCTCTCGGCCAGCA EMBV3_26957 AAACTGTTTTCCCCCTCGGGTTTCTATAAGAGTCAGGTGAAGGCTGATGGATTTCAGAAA Variant GeneID:539376|Mynn:NM_001035424:34_cdna 68^513 4 EMBV3_01287 GeneID:539376 1 GENE Mynn MGC127144 myoneurin EMBV3_07575 TTTCTCCTTTCATGTATGACTCCCGCCCCTTGCTTTTGTTAGGCCTGCTACGTTTATCTG Gene BVV0102_159390 + 0 NULL GK000023.2:23122705-23458550 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35398 TACACACTCACCGAGAACGTGGCCCGGATCCTCCACAGAAAGCTGTTGGAACATGCCTTA Gene GeneID:538547|LOC538547:XM_002697799:404_cdna Constitutive 0 NULL GeneID:538547 24 GENE LOC538547 NULL similar to Uncharacterized protein KIAA0802 EMBV3_14879 CGCGGAAACGTGCCCTCCAGCGAGCTGCAGATCTATTTAGGAATTAGATTTGGCTTTGCT Variant GeneID:615692|SAP18:NM_001035467:73_cdna 243^651 2 EMBV3_15182 GeneID:615692 12 GENE SAP18 MGC127945 Sin3A-associated protein, 18kDa EMBV3_29111 TCATGAATTAAGGCGTCGGGGTGGAAAATATGCTGTAGGATCAGCCTGCATTGGAGGTGG Gene GeneID:522006|ACAA2:NM_001035342:119_cdna Constitutive 2 NULL GeneID:522006 24 GENE ACAA2 MGC127380 acetyl-Coenzyme A acyltransferase 2 EMBV3_10149 GATGGAACAAGAAAGATACCAGGGTGGGAATCCAGTTCTGCCCCAAACTAGCTGGAAGAC Gene BVT0102_047748 + 0 NULL GK000019.2:36927314-36928417 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096619 TCONS_00096617 TCONS_00096621 TCONS_00096624 TCONS_00096622 TCONS_00096623 TCONS_00096618 TCONS_00096620 1 XLOC_058016 Coding TCONS_00096618 XLOC_058016 Coding Coding EME1 19:36927216-36929752 j TSS71755 2064 7 TCONS_00096618_1 75 0.0683139534883721 3 0.18698224852071 0.00397851934778182 0.00582861849471472 0.00346832818432436 0.00293024593740563 0.00316542883655088 0.000900452511954885 0.00169979286989626 0.00619542672533433 0.00303094934046163 0.0182366692619426 0.000836399570301478 0.000414156589501714 0.000412674896350289 0.00145060175066066 0.000165351937592501 0.0141475151265506 0.00646542215899494 0.00574812136229613 0.00332236997816316 0.00364616450126832 0.00121802429199426 0.00323905217073961 0.0035138508977126 0.00621611550122926 0.00296895258963897 0.00392902143507757 0.00154942042188449 0.00177876488626002 2.25407571398166e-07 0.000574181928280736 XM_005220479.1 EME1 PREDICTED: Bos taurus essential meiotic endonuclease 1 homolog 1 (S. pombe) (EME1), transcript variant X1, mRNA. 0.0 1553 100.00 0.416666666666667 NM_018509.3 LRRC59 Homo sapiens leucine rich repeat containing 59 (LRRC59), mRNA. 2e-172 610 78.60 0.366763565891473 TCONS_00096618_1 sp|Q8BJW7|EME1_MOUSE EME1_MOUSE Crossover junction endonuclease EME1; 2e-39 137 88.00 0.986666666666667 0 coding 1 0 1 1 0.473527511998324 0.155124546279636 -0.0295333299591796 0.571250258078965 CCTCAAGAAGCTCCGAGATCAAACTAGTTTCTCCTTCTGCCTGGAGAGTGACTGGGCTGGAGGGGCCAAGGTGGACCGCTCTGGCAGGGGGCTTGCACTGGTCTGGAGGAGACAGATTCAGCAGCTGAACCGGGTCAGTCTGGAGATGGCCAGTGCCATTGTGGACGCCTATCCGTCCCCACAGCTCCTGATCCAGGCTTATAAGCGGTGTCTTTCTGAGCAAGAACGCCAGAATTTGCTCGCAGACTTACAGGTGCGCCGTGGGGAAGGCGTGACAGCCACCTTGCGCCGTGTTGGACCAGAGCTGTCCAGGCGTATCTACCTTCAGATGACAGCTTTGCAGCCAGATCTCTCCTTAGACAGTGCAGACTGAAGCCAGCCCTCAGGATGAGCTGCAGCACGACTACAGCATAGCAGTCAGGAGCACCTCCTGCGGCACAAGCCTGGGTCCTGCCCACTGCAGGCTTTCCTTGGTGTTGCTATTTGTGATGGTGTCTCTACCTGCCCACCTGGGGTGGAGGCCGAGATGCCTTCCTCTCCTAGCAGGTCGACTGCCATGTATGAACCGCCCCTGTGCTTGCCCCTGCCAGCCCTCAAAAATACAAAGAACAAAGACAGACCACTCAGACATGTATTTAATAATTGTAGAAGTCCAAAAGTACCCCAGCATCAAATCTCCAGGCCACAAGTGAGCTGTCCTCAGCTGGTGGCCTGACGAGGCTGGATGTGCTCTTGCCTTCCCCCCACCCACCGGAGCTCCCTCAGCCAGCCAAGGAATGGGGATCCAGTCACTATGCCGACTTCTGTATTCTCTTACTCATTTTATGTCCTGTGTTTAATTTTAATAAAGCATTTGTACCATTGGTTCTGGAGCTTAGAGGAAAAATTAAGGACTGTGTAGTGATTCTGAATAAGGTGTGGGCCTATGCAGCAGTTCTCCCTGAGGGAGAAAAGAATAAGTCTTTTCTTCCATTATCAGGACAGTCACAAGTGCTGTCCGTGGGCCACTAGTGCTGACAAGCTGGACCCCACTGTCTCTGAACATGACAGGTTCTCAGTCTCCCTGGGGAAAGGCAGGGAGCTTTCAATCACGAGTATTCTGTGAATGAGCACCATGACGGCCATTTCTGATGTAGTGAAAAGAGGTAAAGGAGGCCACAGAGCAAGAAAATGCTGACTCTGGCAGATAAAGGGAGTGGACAGCGCTGTCCTTATTCATGCTAGTCGTTAATATACCACTTTTTTAAACTCCATGATGTCTAGGATCAGTTCTAAACATCAAGTCTCTTATGAAGCTTCGTTTTCAGGTTGCCCATGTGGTATTCAGTCACACCAATTATGTCAGAGCTGTCACAGACAATGTGGCTTTGCAAGGATCCACCTTGTTTATTGGCAGTCAAGGGATTAATGGTCTCAAACTGATGCCAGGAGCCTGGACTGTGCCCATTTTATAGAAGCCACATAAGTTGTGGCAGGACTCTGCAAGAGTTGCCCAAGACCCTTGCGGCTATGAGATTTCTATTTATAGGTCATAAATCTGTTTCCCATGAGAGACTCTATACTCCAGCCAAGAGACACCCAATTCTGGTGTAAGTTTTGTTTACTCAGGACATTATAAAGAAGGTAAATTGATGGAACAAGAAAGATACCAGGGTGGGAATCCAGTTCTGCCCCAAACTAGCTGGAAGACCATAGGCAAGTCATGGAAAGCCTCAGTCTCCCTGTCTACAAGTGTTACATTGGACTGGATGATCTGGAAGTCCTGTCACAGCCCAAGATTTTGTATGGCTGTTAAAATACCAATGTCTGAGATCCTTAAAAAATAGGTATGCCCCTCCCCCCCAATTTAGATGAGATTTGCCAAGTATGGTGTTTCCCTAGTCCCCAATAACACACTGCCTCCTGATCTGCCCTGGCTCCCCAGGGAGGAATGAAAGAAAGGGTCTGTGACATACAAAAGTATAAATGTAGTGACAGCTGACCTTTAGTAGAAACGCGTCTTGCCTTTACACAGCTTTGTATAACAACTAGAAAAGGCTCTCTCCTTACCCCAAGCCTATTCTC EMBV3_01919 AACAAACTGACAGACACAGGGAACACATGAGTGGTTACCAGTGGGGAGGTGGGAGAGGCA Gene BVV0101_045926 + 0 NULL GK000006.2:38483441-38574589 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33383 TGGGGACAGACTTTGCCTAGTATCAATACAAATCCAGCCCTTTAGCCCTGAGACTGGTGG Gene BVT0102_324631 + 1 EMBV3_11463 GK000018.2:35491555-35493611 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082951 TCONS_00082952 TCONS_00082954 TCONS_00082947 TCONS_00082948 TCONS_00082953 TCONS_00082946 TCONS_00082955 TCONS_00082950 1 XLOC_051147 Coding TCONS_00082946 XLOC_051147 Coding Coding NUTF2 18:35476606-35492914 = TSS62460 2458 1 TCONS_00082946_3 127 5 0.849573802661434 0.00131917921521847 0.000320033278698209 0.000625963969888793 0.000196366249710347 0.000135114347074954 8.23173151561379e-05 0.000251053163634405 0.000424276965535148 0.000368028488860355 9.35183806084331e-05 2.82561645110976e-07 6.84635023131472e-11 4.30880410433543e-05 0.000179967019766319 0.000135299670514144 0.000559385384599637 0.000705250864514922 1.47917470691302e-09 0.00026362792661012 0.000986494996251464 0.000247015114174778 0.00113924091614452 0.0011359825346747 0.00170490431205953 0.00044016504098174 0.000119031794032884 0.000120316240337274 0.000196202761067951 0.000147346338355188 1.9713658155245e-10 NM_001037624.1 NUTF2 Bos taurus nuclear transport factor 2 (NUTF2), mRNA. 0.0 1564 99.89 0.354353132628153 XM_005255771.1 NUTF2 PREDICTED: Homo sapiens nuclear transport factor 2 (NUTF2), 0.0 2013 81.38 0.854353132628153 TCONS_00082946_3 sp|Q32KP9|NTF2_BOVIN NTF2_BOVIN Nuclear transport factor 2; 3e-92 267 100.00 0.992125984251969 1 noncoding 0 0 0 0 -0.0224765566175469 0.878529416809332 0.0369121307605294 0.549227632041588 GTTCCAGAGGCTTCCGCTAGACCACAATTCTCAGGGGCTCGCCCCGGCGGCCTCCCTCCCTAACTTAGCCTCACCTCCCGCGCTGCGGGCCGTGTCTGGGCCTCGGCGAATAGGACGTCGGGAATGGTAGTTTTCTCCCAGCGCACCTATACCAGAAAAGAGCACGAGGAGGACTGCGTTTCCCAGAGTGCAGCGGGGTGGCAAGGGAAGGCAGGGGGGAAGGGACAGTCGGTCGCAGACCGCGCTGGGTTGCCGCCGCTGTTGCCGCCATCGTGCCAGCCCCTCGGGTCTCAACGAGGCCGGGTGACGCTCCAGAATGGGAGACAAGCCAATTTGGGAGCAGATTGGATCCAGCTTCATTCAACATTACTACCAGTTATTTGATAATGACAGAACTCAACTAGGCGCAATTTATATTGATGCGTCATGCCTTACGTGGGAAGGACAGCAATTCCAGGGGAAAGCTGCCATTGTGGAGAAATTGTCTAGCCTTCCATTCCAGAAAATCCAGCACAGCATCACGGCGCAGGACCATCAGCCCACACCAGACAGCTGCATCATCAGCATGGTTGTGGGCCAGCTCAAGGCCGATGAAGACCCCATCATGGGGTTCCACCAGATGTTCCTATTAAAGAACATCAATGATGCTTGGGTTTGCACCAATGACATGTTCAGGCTTGCCCTGCACAACTTTGGCTGACCTCCTCCCAGCCAGGCACTCATGCTGTTTCCTCCTCCCTCCTCTTCCCGATACTATTCACACTCCTCCAGATGCTCCAAATATCATTCACAAACGAGCAGGGCCGCGGTGGGCGTGGGCGCAGTGCGCTGCTGCTACCGAGGTGTTGTGCATGATGTTTGGATGCTAGACTAGTTGCATCTGACAGGAGAAGTTTGTGTTGTACCAGCGCATGCCTTGGAAAGACTTAAGTAATGCAAAAGGTTGTCTTTTTTTTTTTTTTTTTTAATCTACTGACAAGTTGCTCTAGTAACCCAAAGAAGTGAAGGAGAAAGCAGCTGCCTCACCGCCCAGATATTGATTTGTTCAGATGTTTCAATGCCTCATGATACAATAAAACCACGAAAATTTTCTTAACAGTTTAAATTGTTTGAATTAGTTGAATAGTGGGCTGGGCATCCATAACTACCCTGCCTCATTGGCTCTCTCATGTCTCACCATCCCACATCTACGCCCACTCAGCAATACCTGTTGCAAGGAGAAAACACCGAAGCAGCACTCTGAGCTCAGGCAGCACTCTGCACTCGCTTCTCTTAGAAGCCCTGTAGGGCATAGTGTTCCCTCCATCTGGCCTTGGAAAAGTGAGCTGCAGACAGGGAGAGCTCAGGTCTGAACGGAAGAGTCCCTTGAAGCCTCGGCAGTCAGTCCTGACATTTCCTGTGACCTCTACACTTGGTAGCGTCAGGGCTCTAATGACAGGTGAGATGATGCAGAATCCCACCGAAGATTGAAAAGCCTTGGCAAAAATGGCCCATTAGGTTCAGGCCCTCTGGACTGAGGGCTCAGCAGGACCAAGTATGAGCAGGCATTTGAGGGCGAAGGCCTTGTTCTAGCCACAGAAAGGTCAGTATCACATCCAGCATGCCCCGTAAATCCCCGGACAAGCAGAGGGCAGCTCTTACCCTGTACCATCTGCTTCGGATGTCACTACCAAAACGGGAGTGCCTCAAACAGCCAGCCTCCAATGCCCAGAGCCAGGCCCAGTTGGGTTGGAGTATAGATTTAAAACTGAAAGCATTCTGAGTTTGAGGGAATTCAGGTTGTAGGATTTCTCATGCCTGAGACCTCTGCAAGGCATCTCTAGGCCTTCTCCTATTCCCTCCCTGACCACAAACACAAACTCACACTACTATCCTCAAATCCCAGGAAATCTCAGCTGTTGGGGCAGTTTCTCCTCCTTAGTTTTGGGGACAGACTTTGCCTAGTATCAATACAAATCCAGCCCTTTAGCCCTGAGACTGGTGGTGTAAAACTGATGGCAAGGTAGCAACCACAGACCAGAACCAAACCCAGGATTTGGTCTGTTTACCTGTTTGGGGTTTTAGGATTGGTGAGGGCACCACAGCTTTGCCTGTTATGCACAGCCCCCTTCCCTCCTGCACTGTGGATGGAAGCCAGGAACTTCATCAGACCCCCACTGGTAGCCTAGCTATGCTGGGCACTGGGCTGGATGGTGTGCTGTTTGAAATAACCGCATACTCAGGAGGTTTCAGTGGGACTAGTTTCTTGGCTGCTCTGTATTTGGGGGATAGAGGTTGGGGAGAGGTAGAAACCTGCTGCCTCTTAAACCACCCTGTATAAAATTTGCAATACAGCTTTTCCATGTACCTGTGCCTGAAATGTCTGCAATAAAGAAGTGTTTGTAAACCATGGTTTCTTTCTTTTTACCTGATGGTGCAAGGTCATGCAGAGGGATGCTGGGAGACATTAGGGAACAAG EMBV3_17633 ATCGCTGAAAAGTCTCGGGAGTTCTTGGAAGCTGAAACTCGCCAGCTGCCCAATGGTGTT Gene GeneID:100140763|CCDC146:XM_002686753:35_cdna Constitutive 0 NULL GeneID:100140763 4 GENE CCDC146 NULL coiled-coil domain containing 146 EMBV3_04729 CTGACACCCAGAGAAGTGATGCTGCTAGTAAGTGGAATTCACATGTTCTCATTTCTGGTC Gene GeneID:512383|KLHL31:NM_001101955:110_cdna Constitutive 0 NULL GeneID:512383 23 GENE KLHL31 MGC155232 kelch-like 31 (Drosophila) EMBV3_10961 CACTGCTGATGGCCAGTTAGAGGCATCAAGACCCTCTGCCAGCTTCCTGCCTCGATCAAA Gene GeneID:100297780|LOC100297780:XM_002694332:46_cdna Constitutive 0 NULL GeneID:100297780 17 GENE LOC100297780 NULL similar to CG7532 EMBV3_01157 CTTAAAGCCAAAGAGAATGGTAAGAGGACCCAAGACTAGAGCTGTGAGGCGGTAGCCCTC Gene GeneID:613306|SMCR7L:XM_002687928:151_cdna UTR3_Alt 2 NULL GeneID:613306 5 GENE SMCR7L NULL Smith-Magenis syndrome chromosome region, candidate 7-like EMBV3_38762 GGGACAGTTGGTAGATTGTCATATTCTGCACCACACACAAAACAGACGCACAGACTACTG Gene BVV0102_015251 + 0 NULL GK000012.2:85669020-86242371 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037485 TCONS_00037482 TCONS_00037484 TCONS_00037487 TCONS_00037486 TCONS_00037483 1 XLOC_021398 Coding TCONS_00037484 XLOC_021398 Coding Coding EFNB2 12:86239404-86278431 j TSS27040 4255 1 TCONS_00037484_3 254 5 0.891098242197509 0.000249081951086605 1.1862457391348e-08 2.08617996641179e-10 0.000161879105409906 0.000264854355584406 2.57844353593197e-05 3.78173694231587e-06 0.000308267591915907 5.49162308267928e-05 8.57048901820741e-09 4.47857029734488e-10 7.6428682909909e-06 1.2880162120683e-12 1.17028037412432e-10 5.40402848818406e-09 0.0097800461245635 0.00313151925436698 0.00456932902827967 2.14610340892832e-11 9.07144180537221e-09 8.72564122832176e-10 0.000864516966309909 0.000740091168233729 0.00059134235072907 3.55844995192103e-05 0.000276457374908433 1.23968771080951e-15 0.000370994554088865 9.94251838779303e-08 8.60799426687011e-10 XM_002691986.2 EFNB2 PREDICTED: Bos taurus ephrin-B2 (EFNB2), mRNA. 0.0 7625 100.00 0.993419506462985 NM_004093.3 EFNB2 Homo sapiens ephrin-B2 (EFNB2), mRNA. 0.0 4174 82.28 0.993889541715629 TCONS_00037484_3 sp|P52799|EFNB2_HUMAN EFNB2_HUMAN Ephrin-B2; 1e-169 476 95.67 0.996062992125984 1 coding 0 0 1 0 -0.124968418367039 0.528901348162544 -0.015284807534919 0.747188819941036 GGAATCTGGCTGTAGGAGCCCACTCCCAGATTTCTACCTGGACAAGGACTGGTACTATACCCACAGATAGGAGACAAATTGGATATTATTTGCCCCAAGGTGGACTCTAAAACTGTTGGCCAGTATGAATATTATAAAGTTTATATGGTGGACAAAGACCAAGCAGACAGATGCACTATTAAGAAGGAAAATACCCCTCTTCTCAACTGTGCCAGACCAGATCAAGATGTAAAGTTCACTATCAAGTTCCAAGAATTCAGCCCTAACCTCTGGGGTCTAGAATTTCAGAAGAACAGAGATTATTACATTATATCTACATCAAATGGGTCTTTGGAGGGCCTGGATAACCAGGAGGGAGGGGTGTGCCAGACAAGAGCCATGAAGATCCTCATGAAAGTTGGACAAGATGCAAGTTCTGCTGGGTCAACCAGGCATAGTGATCCAACGAGGAGGCCAGAATTTGAAGCTGGTACAAATGGAAGAAGTTCAACAACAAGTCCCTTTGTCAAACCAAATTCAGGTTCCAGCACAGACGGTAGCAGCGCCGGACATTCTGGGAGCAATATCCTCGGTTCCGAAGTGGCCTTATTCGCAGGGATAGCTTCAGGATGCATCATCTTCATCGTCATCATCATCACGCTGGTGGTGCTGCTGCTCAAATACCGCCGGCGGCACCGCAAGCACTCGCCGCAGCACACGGCCACGCTGTCGCTGAGCACGCTGGCCACGCCCAAGCGCGGCGGCAACAACAACGGCTCGGAGCCCAGCGACATCATCATCCCGCTAAGGACCGCGGACAGTGTCTTCTGCCCCCACTACGAGAAGGTCAGCGGGGACTACGGGCACCCGGTGTACATAGTCCAGGAGATGCCCCCGCAGAGCCCGGCGAACATTTACTACAAGGTCTGAGCCTCGGCGGTGCCTTCGCTTCCCGGAGGAAACTTACTGTCCCCGCTGCTGCCCGCCGAGGGTCCGAGACCCCCTGTGTCTGCGACGGACTGACGCGCAGCGGGGAGCGGGGACACCCCTTCTCGGAAGAGCCCCGTGGAGTCGGACAGCTTACTAGTCTGTAGCGTTTCGGCCGCGGTGACGGAGGATGCGTCCCGCCCGTCGGAAGACTCGCGTAGAAGATGTGCGCGCGCGCCCCGCCCCTCTCCTCCTCCGGGTACCACTGGGTACCACGAGCGCGCGCGCCCGCGGGCCTCCGCAGGAGCCGGGAGACCGAGCGGCTGGTGGGCAGGAGCGAGAGCTGGGAGCATCCCAGGCCCCTGGGTCGCCGGGCCTGGCGGGGCCGCCCTCTGCCTCGGGCGTGGCCCCCGAACCCCACTCCTGGGCTGCACCCCGGACTTGTCTTGTCGCACAGACTCTGGCTGCGTGAGGCCTCGGGAGACCGCTGGCTTCTAGTCCTCACTGTTGCACACGCTCTGTCATCCAGGGCTCTGCAGGCCTTCACACGAGATCCCCCCCTTCCCCCAACAGCACACTCGCATTACTCACGGGACATTAACGTTGGGCGTCTCCTACTCCATCCTTCTGCAACAACAGCCGCAGCGAAAGGGGCCACACGTTGATAGGAATGGCGTTTGCAGGTAAAAAGGAGCCTTCCAGCCAGATGCTCGGCTGTCAGCCCAGGAAGACGAGGAGTTTCGTGAGAAGGGGGCGTGGGGGAGACGCAAAGGCTGTCTGTCTGCAAAGGCAGTTCCGTGCTGCCGCCTCTGAAACAAGATTTGGGAAGGGAAAGCCCCAATTAGAGAGCACAGCACTTTGGTTTTGCTAAGATTTTTAAGAGGCAAGTAGGAGACACAACGACACACACAGTAGATTAGGGTGCATTTGAAGGAATTCACTCTTATCAAATAGCAATGCACAGGAATAATGAAATAAATAGTCCCTCTCTAGCCGGGTGGAACAAAGGGGCATTGTTGGTAGAGGACCAGGCTTGGAGAGAAGGGTGATTCGGGCAGGACTTTCTTGGTACTGGCAATAGACGTACAGCTGTGAAGCTGTAGGGAAGTCGTCGGTCTGCTTTGGATGTTATTTAAAGCGGACCCAGCTGCTATACTTACCACATTTTATTAACACAGGGAGAGCCTTTAGGAGAATAGCAGAGAGCCAAATCTGACCTAGAAGTTTAAAAAGCCAAAGGTCACACGGGCTGTAATTCCATCATCATAGACATTATTAAGGCATCTTCATATCTGAAAGGAAGGTCAGATCCCCCTACCCCCTCATTGCCCCTCCCCTGCCACCCCCTCTCCTCATCTCGCCTTGTGACACTTTGGTTTATGGTGGTGCCACCCTGGCCTCGGGGCGAGGGGTGGGTACTGAGCGAGACTGCAGTCCCGGGTACTGTGTCGGGGTGAGGCACACACGGCAACCCTCCTAGGAGTCCCGAGGACCCAAATGATGATGATGTCCAGGGAGGAGAAGGAAGGCAGGATGTGTTTATAATAGGTATATAGAACACAAGGGATATAAAATGAAAGAGTTTTACTAATATATATTTTAAGATTGCACACAATCCACACCAGAAGATGTGAAACTCATTTGTGGTGATTAAGTGGTCTCAAACGCTCCGTGGTTGTTTTTTTTTTTTTCAATTGGACTGCTACTTCTGGGAAAAACGACATTACTCCAAAAATAACAATAATGGGAGCAAACACAAAAATAACCAAGTCCTCTGAAGGCATGTCACGTCACCATAGACTAGGAAGTGCAAGCCCCAAATACCAGGAAATCAGTGTTCACTGCATCGTGTTTTCAACAATGAGAAGATGTGCCGGCCTTTAGCTTCTGTGCTGTGTTTTCCTTGCCTCATGGGCTGAAGTGTTCGCTAGAATCCACCGGGTCACGTCCAGGGGGCTTCAGCTGAAAGTTCAGCCTGAACCCCTTCCTTCCTCGCTCCCCCCTCCCCTCGCCCCTTCCCTGCTGGGAAAAGAAGCGAGTAAACAGGAAACCTACTTTTTATGTGCTATGCAAAATAGACATCTTTAACATAGTCCCGTTACTATGGTAACACTTTGCTTTCTGAATTGGGAGAAAAAAAAAAAAGAAATGAAGCAACAGCATTTTAAGGTTCTCAAACCTCCAGTGAATACCTGCAAAAATGAGTTATCACAGAAATTCTTCTTCTTTCTACTCCCTGAACCTGAAAATGATGTTGGTCCAAAGTGCGTGTGTGTTTGTGTGAGTGGGTGTGTGGTATACATGTGTACATATATGTATAATATATATCGACAGTATATATTATATATATCTATATCATATTTCTGTGAAAGGTTGCCATGGTGACCAGCCACAGTACATATGTAATTCTTTCCATCACCCTGGCCTCTCCTGTACGTGCATTCATATAAGGTTTTCTTGTAAGCCATCAAAAATTGACCTTTAGGATGGGGGAGAGGGGCGAGTAGGGGAAAAATGGGAAACAGTCTGATTTTAATGCAATTGAAGGTGTGCGTCATCAGTTGGCTACATTTTGAGTATGTGCTAAACTGTGAAAAAAAATCAGATGAGTTGATGAAGAGTTGCCTGCAGGCAGTTGACAGTAGTCTGTGCGTCTGTTTTGTGTGTGGTGCAGAATATGACAATCTACCAACTGTCCCTTTGTCTGAAGTTGGTTCAGCTTTGGAAAGTTACTGTAAATGCCTTCCTTGTATTCTCATCCCTAGTCGCCTGACTTTGGAATTTGCACCATAATGTTCAAGTGAAGATGCTGTAAATAAGTTCAGATTTTACTGTATATGGATTTGGGGTGTTACAGTAGCCTTATTCACCTTTTTAATAAAAATACACATGAAAAACAAGACAGAAATGGCTTTTCTTACCCAGATTGTGTACATAGAGCAATGTTGGTTTTTTATAAAGTCTAAGCGAGATGTTTTGTATAAAATCTGAATTTTGCAATGTATTTAGCTACAGCTTGTTAAACAGCAGTGTCATTCCCCTTTGCACTGTAATGAGGAAAAAAAAATGGTATAAAAGGTTGCCAAATTGCTGCATATTTGTGCCGTAATTATGTACCATGAATATTTATTTAAAATTTCGTTGTCCAATTTGTAAGTAACACAGTATTATGCTTGAGTTATAAATATTTTTTCTTTCCTTTGTTTTATTTTGATAGCCTGTCATAGGTTTTTTGATCTGCTTTAGTTCCACATTGCAGTTAGCCCCCAGCCAATGAAGTCACGTTCCAAACCTGTTTCAAACTGAATTTGTTCTTAAAAAAATAAAATATTTTTTTCCTATGGAAAAA EMBV3_39566 ATGTCTGTAGCAGATGTGGGGTTTCATCGTCTGTTCCAGGTTGTAATGGGATGCTGGTGG Gene GeneID:506574|LRIG3:XM_002687553:563_cdna UTR3_Alt 2 NULL GeneID:506574 5 GENE LRIG3 NULL leucine-rich repeats and immunoglobulin-like domains 3 EMBV3_04831 GCTTGAAGACCCCCTTGGACAACATCTCAATCACCAACTGCCTGCTTACAGAATCAGACC Gene GeneID:787870|LOC787870:XM_002699015:57_cdna Constitutive 0 NULL GeneID:787870 29 GENE LOC787870 NULL similar to hCG2042963 EMBV3_20086 CCTGGTTAACATGCAACTGCGGGCCTCCTACACCTACCTCTCTCTGGGCTTCTATTTCGA Gene GeneID:100298141|LOC100298141:XM_002684823:140_cdna Constitutive 0 NULL GeneID:100298141 1 GENE LOC100298141 NULL similar to ferritin, light polypeptide EMBV3_08283 ACGTTCAAGGTCGGAACCCGGTCACTATCAACATCGTCCTGGGAGTGTTAGCGATCTTGG Gene GeneID:281840|ICAM3:NM_174349:285_cdna Constitutive 0 NULL GeneID:281840 7 GENE ICAM3 NULL intercellular adhesion molecule 3 EMBV3_28855 AGATGTAAGATATGCAGAGTGGGTACAGTCAGAGACAAGGATGAGCAGGGAGGTAAGGGC Gene BVT0102_098621 + 0 NULL GK000009.2:49750681-49773260 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34636 GGGAAAAAGATGGAGGAGACGGACATCAAAGGATTAATGAGTTCTACCTGGGCAGAGGGC Gene BVT0102_235807 + 0 NULL GK000013.2:65504024-65507238 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043566 TCONS_00043568 TCONS_00046000 TCONS_00046001 TCONS_00043567 TCONS_00045998 TCONS_00043563 TCONS_00045999 TCONS_00043564 TCONS_00045997 TCONS_00043565 TCONS_00045995 TCONS_00045996 TCONS_00046002 2 XLOC_025973 XLOC_026595 Coding TCONS_00045999 XLOC_026595 Coding Coding CPNE1 13:65504077-65543228 j TSS33453 4967 1 TCONS_00045999_5 402 0.232937386752567 15 0.873512132822478 5.94270971346988e-12 6.82425920411124e-05 6.5547459402067e-05 0.000199596462402992 2.13122305567914e-05 1.31649238918003e-05 2.96703312915171e-05 1.20913463294716e-10 2.7882202071601e-05 2.00394722791667e-45 0 5.57667010277571e-35 1.79622893332197e-23 1.14133869457521e-19 5.2915260468561e-16 0.000195799189986081 0.00287188344979403 4.14123023798882e-09 0.000164681012532404 0.00029122516679292 4.39930189727019e-28 0.000473339373689153 0.000176580675108145 0.000107489183384418 4.35812448676373e-11 2.34674101099402e-16 0.000362461077910085 1.99034755620644e-14 0.00013305045693912 9.90029170659607e-15 XM_005214854.1 CPNE1 PREDICTED: Bos taurus copine I (CPNE1), transcript variant X2, 0.0 6168 98.53 0.699416146567345 NM_152927.2 CPNE1 Homo sapiens copine I (CPNE1), transcript variant 4, mRNA. 0.0 2085 84.88 0.353533319911415 TCONS_00045999_5 sp|Q99829|CPNE1_HUMAN CPNE1_HUMAN Copine-1; 0.0 699 93.00 0.885572139303483 2 coding 1 1 1 1 -0.0448518926358762 0.788939956207616 -0.0244698391608815 0.646614441863165 CTTTCTGGAACGCTGAGCTGCGGAGCGGGCCGGCGGCCATCTTGTGAAGCGGAGGAGAAGGAGATGGCCCACTGTGTGACCTTGGTTCAGCTGTCTGTTTCATGTGACCACCTCATCGACAAGGACATCGGCTCCAAGTCTGACCCACTCTGTGTCCTTTTGCAGGATGTGGGAGGGGGTAACTGGACTGAGCTTGGCCGGACTGAGCGAGTACAGAACTGCTCGAGCCCTGAGTTCTCCAAGACTCTACAGCTGGAGTACCACTTTGAAACAGTCCAAAAGCTCCGATTTGGCATCTATGACATAGACAACAAGACACCTGAGCTGGGGGACGATGACTTCCTAGGAGGAGCTGAGTGTTCCCTGGGACAGATTGTATCCAGTCGGATGCTAACTCTGCCCTTGATGCTGAAGCCTGGAAAGCCTGCTGGGCGGGGGACCATCACGGTCTCAGCTCAGGAGTTGAAAGATAATCGTGTAGTGACCATGGAGGTGGAAGCCAGAAACCTGGATAAGAAGGACTTCCTGGGAAAATCGGATCCGTTCTTGGAGTTTTTCCGTCAGGGTGATGGGAAATGGCACCTGGCATACAGATCAGAGGTCATCAAGAACAACCTGAATCCTACTTGGAAACGGTTCTCTGTTCCCCTTCAACATTTCTGTGGGGGAGATGCCAGTACACCCATCCAGGTGCGATGCTCCGATTATGACAGTGATGGTTCACATGACCTCATTGGTACCTTCCACACCAGCTTGGCTCAGCTGCAGGCAGCCCCAGCTGAGTTTGAATGCATTCATCCTGAGAAACAGCAGAAAAAGAAAAGTTACAAGAACTCTGGAACTATCTGTGTCAAGATGTGTCAGGTAGAAACAGAACATTCATTCCTGGACTATGTGATGGGAGGCTGTCAAATCAACTTCACTGTGGGCGTGGACTTCACAGGCTCCAACGGAGACCCTTCCTCACCTGATTCTCTGCACTACCTGAGCCCAACAGGGGTCAATGAGTACCTTACAGCACTGTGGAGCGTGGGCAGTGTGGTTCAGGACTATGACTCGGACAAGCTGTTCCCAGCATTTGGATTTGGGGCCCAGGTACCCCCTGACTGGCAGGCATCCAGGGCATTGTGGATGCCTACCGCCAGGCCCTGCCCCAAGTTCGGCTCTTTGGTCCCACCAACTTTGCACCCATCATCAACCATGTGGCTAGGTTTGCAGCCCAGGCTGCAAATCAGAGGAATGCTTCGCAATACTTCGTGCTGTTGCTGCTGACTGATGGTGCTGTGACAGATGTGGAGGCCACACGTGAGGCTGTGGTTCGTGCTTCCTACCTGCCCATGTCAGTGATCATAGTGGGTGTGGGTTGTGCTGACTTCGAGGCCATGGAGCAGCTGGACGCTGATGGTGGACCCCTGCACACACGCTCCGGGGAGGCAGCCGCTCGTGACATAGTGCAGTTTGTGCCCTACCGGCGTTTCCAGAATGCCCCTCGAGAGGCACTGGCGCAGACTGTACTTGCAGAAGTACCCACGCAACTGGTCTCCTACTTCAGGGCCCAAGGTTGGGCCCCATTCAAGCCACCTCCACCTGCAGCCAAGGGCCCTGCACAGGCCCCCCAGGCTTAGATTCCCTTGAAGGGGTCGACCGTGGCCATTTCTCAGTCCCATGTTAAGGTCCCCAGCCCTGAACACACATTCCCTCGTGCTTGTACTTAGGTTTTATACTTTTATACTTAATCCTGCTGTTGCTGCCCTCGATCTCACCTGCTTGCCCCTGGAATCCCTCATTCAATAAAGATGAAACCCACTCCTTTGCTACTACTCTGTGTTTTAGGTGGGAATCTGCTATTAGCCATGGTTAGTTCTCCTCTCTGAACTTACTTGTTGACTTTAGGGGTTGTTGGAGTGAAGGAGTCCTCTGACATAATAGCCCCCACTCAAAGAAATTGGGTATTCCCTGCCAGATATCTAGAGACACTGACTCTGTTTTGGAAAATGCAAAGACTGAGTATAAGCCAAACACCTAGCCTAACCTGCGTCAGAAAAGACTGAGTATAAGCCAAACACCTAGCCCAACCTGCGTCAGAGCAGAGCTGAGCTGGGAACACAGACAAGGTGGAAAGTGTTAGGGGAGGGGATCAAGGGCTATGCCTGACTCCTTGGAAGGTGGAGCAGTGGTGGTTCTAGTTCTAAAAATAGGCTACAAGCCTCACTTTTTTTATTAGCTATTCTTTTTCTTACTAGAAAATTAATATGTATATTCATTATAGGGAAAAATACCACCCAAACTCCCGTGTCCCATTAAAATATTTGGTGCATATTTTTTAATACTTTATACGTATTTACAGTGATGCATGTTTTTTTACAGAATTGGGACCATACTGTATGTACTATTTTTGTATGCCTTAACTGTGTTTTAAATGTATGCTAGTTAGTACAAAATGATTTCACATGTATGAGATAGATAACGGGCAGGGTGTTATTTCCTACGTCTGACAAATTTTTTTCTCTAAATTACTACACTGTTTGCACTTTGTTTTATTGTATTTTGGGTATTTTACCCATTAGAACTTATTACTGACTTCATTCTTTTTAATGCCTATAGATTACTCTGTGTATGAGTGTATTATAGCTTACTTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCAACCCTATAGACAGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCGAATGCGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTAGCAACCCCACGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGATAGCTTACTTAGCCAATCCCTAATTTATCAAGATTTGGGTCCCTTCTGGTTTTCTTCCATTACAACAAACAATGCTGTAAGGAATATCCTAATACATTTATCTGTGCGTTTATATAGTAATATTTCTGAAAATTTTATTCCTACAAGTGAAAATGTTCCATCAAAAGATATGAATACGTAATATTTTAATAGATACTGTAAATTGCATTTCATAACAGTTTTTTACCCATTTCATTAATATGACAGGCAAAAAAAACCCTCAGTTTTAGTTGAATTTATTGAATTACAAAGGCTGGGTATCATTTTATATGTTTACTTTTCAATTGTATCTCTTATGAATAGCTTTATTGTTATAGTTATTCAGCAAATCTTTATCTCTTATACATGTCAAAAATATTTCCTCCCAGGCTATTATCTTTTCAGTTATAGTGTCTTTTGGTCTATGTAACTCTTTTGATATGGAAATTTAAAAATTTTATGTTATGTCAGCCTAGCTTGCTTTTGTGTATGTATGTTTGTGTATGTAACCTAGCTTGGTTTTTAAAAAATTATCCATGTATTATTACTTACTTTTCATGACATTAAACAGTCTCTTATATTACCATTTCTATTGGCTACATATTATTTTTATAGTGTACTTTATCTTCTTAGATACTATTTCCATTTTTTCCTTTATAAACAATAGTGTGTTCGACATCCTTAAAGTAGTAACTTAGATTATATCTGTGTATCCTTTGGATCCATTCTTAGAAATGGAATTGCTGTGATTAAAAAGTATAAAAAAGTTAAGACTTTTCAGCACCTATTGTGAAAATGCCCCCTCCAGAAAAGTTGTATTAGTTCATTAGTTAGAAAACTTGAGACTTTTAAGAGTACTCAATAGATTCTTTTCCCTCTGTCTTCAAATTACAAAAGTAATAATCCCCAAACTTAAAGGGATACATGTTCCATCCTCACACATACTCTTGCATTCCACTTCCTAGAGGTACAGCACTGTTGATAGTCTGTAGATTCTTCCAAAACATGAACACACGGGAAAGGATCCTAACAGTCAAGATGTTGCATGTGTTTCTTTGACACTTCTTCCCCTTTTCGAGCCCTCTGCCCAGGTAGAACTCATTAATCCTTTGATGTCCGTCTCCTCCATCTTTTTCCCTCCAATTCTACTCTTGACCCTTGGAATGAAGAGTTCTTGGATCAATAAATGAATGGTCCCATTTTCTGGAGCGTCTTCTGTTCCCTGTCAGGCTCCTGGAGGGCAGGGACTGGTCAACACTCTACCACCTGTACTGTTCCTAGCATAGTTGAACACTCAAGTTTTAGTGAAAACAGCCTGAGTAGGGACAATCAGGCCTGCATCATTTCTGACTCAAATGCCCCCTACAGGTTCTCAAGTCTCCCTAGGATTTTACCTGAAAAAAGGGAAGGTTCTGCCTCCACCTGCACCTAGCAAGAGTTGGGGTGAAAAGTGAGGGGCACAGCACAGCTTCATGCCGACTGGTGGCTCTGCAAGAAGGCAACCTCCAGAGAAAGGTCGGAGAAGGCCATGGCACCCCACTCTTGCCTGGAAAATCCCATGGATGGCAAAGCCTGGTAGGCTGCAGTCCACAGGGTAGCTAAGAGTCAGACGTGACTGAGCGACTTCACTTTCACTTTTCACTTGCATGCATTGGAGAAGGAAATGGCAGCCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTTCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGAGAAAGGTAGGCTCAGGGTCCCACTGTGGCTCAGGTCTTCACTAGCTGTGTGACCTTGCAACTTTCCTGATCTGAGCGGTTTCTCCCTCTGTGGTTGTGAAGATTAGTTAGAAAAGGCATGTAACATCCAGAGTACTATCTTAGGTGCATGGTAAACACTCCACACACACTACTGCTGCTGCTGTACTGATCTGGGCTTCTCCAAGAAGGCACTTTGATAGACGCCCCCCACCACATTTATGTACCAAAGGCAACTAGAGTGCCAGCCTCCCTGCCC EMBV3_33981 CCTTTCAATAACTTGCTGCCTCCTTAGAGATTCAGACTTGACCCATCTGTCCCAGAGCCC Gene GeneID:100336425|LOC100336425:XM_002694070:276_cdna Constitutive 0 NULL GeneID:100336425 16 GENE LOC100336425 NULL preferentially expressed antigen in melanoma-like EMBV3_27059 GAACCAAATTTATTCTACCTCGTGGACGCTTCTCGCACCATGCCCTCTGTCCTGTGGCCA Gene BVT0102_292276 + 0 NULL GK000007.2:2365229-2371308 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215010 TCONS_00215006 TCONS_00215007 TCONS_00215009 TCONS_00215011 TCONS_00215008 1 XLOC_130811 Coding TCONS_00215007 XLOC_130811 NonCoding Coding ZFP2 7:2367007-2394402 j TSS160678 706 7 0.97448346353216 0.00022269449060406 0.000405940197165742 0.000224869036234604 0 3.60078818662357e-106 0 2.76871282110399e-156 2.61661068955933e-92 3.08332070450897e-56 0 0 0 4.06412566752835e-06 0.000305162122616677 1.85313779520823e-125 0.000990879451043425 6.46360154111562e-169 0 4.10680683761984e-283 2.06563119180259e-302 0 7.90237003965212e-130 0.000139169029900937 4.34575139246321e-05 0.000246106633308255 0.00046144005730232 8.81695967864163e-05 2.0323917830272e-74 1.03271957858063e-05 1.20649864300494e-47 XM_005208384.1 ZFP2 PREDICTED: Bos taurus zinc finger protein 2 homolog (mouse) (ZFP2), 0.0 827 100.00 0.647308781869688 XM_005265990.1 ZFP2 PREDICTED: Homo sapiens ZFP2 zinc finger protein (ZFP2), transcript 3e-50 203 77.14 0.389518413597734 0 noncoding 0 0 0 0 -0.0820016391353725 0.622786664692096 0.0149967210549692 0.761985358992593 CGCAGGCTGCCTTGGCTCCTTCTGGGAGAGGCTCCATATTCTCTGGATCCTGCCAATCCCCTGGGAAGGACACCACAGGAAGGAAGGAGAAGGCAATGGCTGCTGGGCCTCTACTTTGGGGAGTTCAGTTTCAGGATTCAAGGATGTGTCTGCGGACTTCACCTGGGAGGAGCAGATCCATCTAGATTCTCCTCAGAGGAACCTGTATGGGGAAGTGATGCTGAGAAACTATAGGAACCTGGTTTCACTGGGACATCAGCTTTCCAAACCTAATGTGATTTCTCAGCTGGGTTGAGAACTGAACCTGATGACAAAAGAACATCCTGGGTGCATCTCCCCAGACTGGAAGACCAAGACTTGAAACAAAAGAGTCAACAACGAAGCCCAAGTTCTTGAAGATTTATCTTATGGGATTCTCCTTTGGACATCAGAGACTTCACACTGGAGAGAAAATGTGAGAGTGCTTAACTGGACAGCCCAAAGACCTGCACCCAATTGTACAATACAAACTCCTTGGCATCAGGGCTCCTTGCTAAGACGTGGAGAACCAAATTTATTCTACCTCGTGGACGTTTCTCGCACCATGCCCTCTGTCCTGTGGCCACCATTCTGTTCCCAGCCAGCATCCGCTGAGTCCTGAACTACCACAGCAGCCTCCTCAGTCATCTGCTCGCACCTCTGTCGACCTGGTTCCCGCGTCCCACTC EMBV3_09988 TACCCTGTCGACCTGAGCGTCTCTGCACCCCACACATGATGGCAGAGTTAGATAAGTGTT Gene GeneID:100337457|LOC100337457:XM_002693256:545_cdna Constitutive 0 NULL GeneID:100337457 15 GENE LOC100337457 NULL solute carrier family 23 member 2-like EMBV3_39338 TTGGGGTGTGGTGGCAGGGAAATGGACAAGTTCATTTGCTCTCTACACCTTATTGGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43584 GTGGTTCAAGGCTAGTGACGTGCTAGAGTGAGCCCCCACCAGCTCCTAAAAACCAATTAT Gene BVT0102_176375 - 0 NULL GK000010.2:79824858-80078676 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39726 AAGCAGTCCTTCACCATGGTGGCTGACACCCCGAGCTCCAGAGAATCAAGAAGACCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37856 AGTGAGGTTGTATCCCTGGAGGGCCAAATTGAAAAGCTGGAATCACACCAGGACCTTGAC Gene GeneID:782003|LOC782003:XM_002687727:36_cdna Constitutive 0 NULL GeneID:782003 5 GENE LOC782003 NULL similar to mCG15020 EMBV3_08467 GAAAATCAGGCAACAGAGAGATGCCCCAGGTCACGCATACTTCATTCTCTCTCAGAAGGC Gene GeneID:617589|CLUAP1:NM_001105450:285_cdna Constitutive 0 NULL GeneID:617589 25 GENE CLUAP1 NULL clusterin associated protein 1 EMBV3_03875 GGGACAGACTTTGGAAACATTCCTGTGGAAAGCCACTCTTTTCTTCTCCACGGTGTTGCC Gene GeneID:782093|AASDH:XM_002688264:194_cdna Constitutive 0 NULL GeneID:782093 6 GENE AASDH NULL aminoadipate-semialdehyde dehydrogenase EMBV3_32804 GTCAGAACCTATTCTAGGTGGCCATCATCATAAACTCTGTTTCCCGATTATATCCATCTG Gene BVT0102_162965 - 0 NULL GK000015.2:15523500-15585021 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058353 TCONS_00058352 TCONS_00058354 1 XLOC_036079 Coding TCONS_00058353 XLOC_036079 Coding Coding SESN3 15:15450241-15530869 = TSS43987 9425 1 TCONS_00058353_4 544 11 0.883240105671797 0.00306006647998888 0.00245637100556513 0.00239420385455886 0.00115767640005088 0.00177650365377229 0.00050919415924314 0.000685556577259668 0.00142436793621168 0.00109623669857847 0.000344573900023661 2.45503735645449e-05 6.45686933817248e-05 5.0558843407966e-09 0.000350575257877984 8.46365564171116e-05 0.00100142652885282 3.76604225326661e-08 8.23527825013514e-09 0.00153261197836112 0.00117437686055122 0.00112476386900807 3.86980363950818e-09 0.000189580776125927 1.04992057120725e-07 0.00412357828375392 0.0016737057647203 0.00119165344535714 7.15654826523703e-05 8.41319906892356e-05 4.53256315659271e-05 XM_594021.6 SESN3 PREDICTED: Bos taurus sestrin 3 (SESN3), transcript variant X3, 0.0 1.657e+04 100.00 0.974960212201591 NM_144665.3 SESN3 Homo sapiens sestrin 3 (SESN3), transcript variant 1, mRNA. 0.0 9586 83.41 0.975172413793103 TCONS_00058353_4 sp|P58005|SESN3_HUMAN SESN3_HUMAN Sestrin-3; 0.0 962 98.93 0.854779411764706 1 coding 0 0 0 0 -0.0863179305095603 0.575431523754507 -0.01949803055983 0.711883187225393 ATGCATAAAGTTCTTTGCGATCCTTGGCTGTCAACTGCTACAGGACTGCAGTCTTCTTTCCAGCTAAGATTCTGGTTCAGAACCTCGGAGACAAACTTAACTTGCCCGGAGATTCGAGGCGTCCTCGGCGCCTGTGATTGGCCGGTGCCACGCCCAGCCGACAGCAGCCGCTCATTGGCTGCAGGCTGGCGCCGGGGGGCGTGGCCGGGGCGGCCCGATTGGCGGGAGGGGGCGGACAAAAGAATCAGAGTATCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTGTCCAGGCAAACACAGTGGATGAACGTACTAACTTTCTTGTGGAAGAATACTCTACATCCGGTCGCTTGGATAACATCACCCAGGTCATGAGCCTGCACACTCAGTACCTGGAGTCCTTCCTGAGGAGCCAGTTCTACATGCTGCGCATGGATGGCCCCCTTCCTCTACCGCACCGGCACTACATCGCCATCATGGCTGCAGCTAGACATCAGTGTTCTTACTTAATAAACATGCATGTGGATGAATTTTTAAAGACAGGAGGTATTGCTGAATGGTTGAATGGTTTGCAATATGTACCACAAAGACTGAAAAATCTTAATGAAATAAACAAGCTGTTAGCACACCGACCCTGGCTGATCACAAAAGAGCACATTCAGAAACTTGTCAAAACTGGAGAAAATAATTGGTCTCTGCCTGAACTGGTACATGCTGTGGTCCTACTGGCTCATTATCACGCTTTGGCAAGCTTTGTTTTTGGTAGTGGCATCAATCCAGAAAGAGATCCAGAAATCTCCAATGGATTCAGGCTAATACCAGTCAACAACTTCTGTGTGTGTGATCTCGCTAATGACAACAACATAGAGAATGCATCCCTTACCGGCAGCAACTTCGGGATTGTCGATTCTCTAAGTGAGCTAGAGGCCTTAATGGAAAGAATGAAAAGGCTTCAAGAAGAAAGGGAAGATGAAGAGGCGTCTCAGGAAGAAATGACCACTCGCTTTGAGAAGGAGAAGAAAGAAAGTCTTTTTGTGGTCTCTGGAGATACTTTTCATTCATTTCCTCATTCAGATTTTGAGGATGACATGATTATAACATCTGATGTCTCCCGATATATTGAAGACCCTGGTTTTGGATATGAAGACTTTGCCAGACGAGGGGAGGAACATTTGCCAACATTCCGAGCTCAGGACTATACCTGGGAAAATCACGGGTTCTCCTTGGTGAACAGACTTTACTCTGATATTGGACATCTTCTTGACGAGAAGTTCCGCATGGTCTACAATCTCACCTATAACACTATGGCCACCCATGAGGATGTTGACACAACGATGCTGCGCAGAGCTTTATTTAACTACGTTCACTGTATGTTTGGAATCAGGTATGATGACTACGATTATGGAGAAGTTAATCAATTACTTGAACGAAGCCTGAAGGTTTACATTAAGACAGTGACCTGCTATCCTGAGAGGACTACCAAGCGCATGTATGATAGTTACTGGCGTCAGTTCAAACACTCAGAAAAGGTTCATGTCAATTTACTTCTAATGGAAGCACGGATGCAAGCTGAGCTTCTCTATGCTCTTCGTGCCATAACTCGGCATTTGACCTGAAGCATCACCCAGGGAAGATATCATATATGTGTAAAGACCTTTTCGCATAGGATATACATCAGAAGCTGTTTGTGATGTAGCATCAAACATTATTCAATTCTCTAGTGTCAAAGTTTTAGCCGTTTCTTGGGGGCGGCTGTAATGTGCAATGATGTGTTTTCTTTTCCTTGATGCTTAACATGACTAACAATTGCAAAAATAATACTGAGGAGCACTACTTGGCATTGTTTGTAGTTGGGTTTTTGGATACTGATCATAAATCATGAACCTGGTTTGTTAATGCTTAACTTCAGTGCTTTGGGGTTTGTATGTGTATTTTTGTTCTTTCCTTTTTTTTTTCTAATAAGGAAAAGCGCTTACAATCTGCTCGAGCAATTGTTTTTCAGATATCGGAATTCAGCAATGAATGACCTCCTCTGGCCATTCTAGAACTTTAAGGTTGTGTCCTACACCTGGTGGAGGAGAAGCATGCGCTGTTGGACTAAGCTGCTCACAGGACACGCATCTGTGTCTCCAGGAGTTTATTTGTCAGGCACTGTTTATTTTTTTGTTTGTTTGTTTGTTTTTTTTTACTGCTATTGGCGATAACATGAAATGTGATACAGCCATTGTCCATAATTTAATGTGAAATTGATCATGATGAATTCTATAGCATGCTACTGAAATGCCAAATTCAGCTAGTTCCTTTCTCTTCTGAAACAGAAGCTTCCGTTTTCCATATCAGATGTATATATTCAAAGTGGAATTATGCACACTCCTTTCTATCACTGACAGTAATCCTCAGTCATCAGAGTAATCAGTGCTCACAGGACTGCTTACAGTTCATTTAGTTGGCACATAGAAACATGTACCCACACAAGACTGACCAAAAATTTTCTTTGCACATTTTTCTTTTCTCATAGTGTTTTCTATATTACAGTAAGCAGAGGAAGGTTAATATGCCTATATTTTTTTCCTGTTAGGCTTCTAGAACTTACTTTCCACGGTTTTTCTTATGATAGGTTAAACAGTTGATTATTCAAAGGTAAAAATTGTGTTTCTATGCATTAATGTGATTGAACAACAACAACACAAGAGTGCAATATGTAAAAAAAAAAAAAGAGAGAGAGAGAAAAAGACTCAACAAACTTTCCCCCTATTATGTATGTCACTGCAGAAGTGTCCTTTTACCACAGAGCTATAAAGAAATTTAGTTCAGATTTCTTTATCGCACAAGGCTTTTGCCTTCCTGGGGTTGAACAATGTTCCTTTTACAATGCCAAAGCATCCCCATTCCCAGAACAATCTCTTTGGACAACTGGTTTAAAAAAGATCTCAAGTCTTATGGGAGGAAAAAGCATCCCCAAAGTCACATTTTTGCATTGGTTTATGTTGCTTGATTAGACTATCTTCACAGAGCACAATGCTGTACATTTATAGCTTTAATTTGTATTATGTTAATGAACCAGTGAAGTGCCTAAAGAGATGCTCACAGCTATCCGGTAGGACACGACTGCACTGCTTAAACACTTTTTGGTTAACTAAGGGTGACTTGAATTTTACACAAACATACTAATTTTTTTTTAAAAAATCCATTTTTTTCACAGTAAAGAAGATAAATTTTTCCGTTAGCATTCCCACAAAAATTGTATTTTAGACTTGTAATCTAGGACTTAACTTTGTCTTTCCTCTCATGAAAGAATTGTGGGCTAGTGTTCTCGTCAATCATTTTCCCCTTCCATTTATCATTCTTTTCTGGTACAATCCATTAGGTTGCTTTCTGTTAGGCTTTGTTCTAGGTAAGAAAATAGCAAGATGACTGTACACCTATGAATATAAGGTAGTTCTGCATTTTTAGATTCCAGGATCTTGTTTGAAATCTTCCATGTGAGGGAAAAAACTGCTAATATTTTTCAAGACAGGGTGGTTTATTTAAAAAGATTATTCAAAGAACTCATGCCAGATCGAGTCTGTTTTGTTTATTGCATATACCATATGTTGATGTTATTCCATATCACATTATATAGATAGGTACTAACTACAAAGAAAGTATTTAGGGGAATGGCAAAATATGAATGACAACATGCATGTCCATTTGACTTCCCTAATTTTAGAACTTTCAAGTTGAGGATACCCTTTACTCTTGACATTTTGTTTTTTTTAACTAGAATTCTTTCAGCTAATATCCCTTTGTTTTTGTGCAGGTGACCTGTATTAGAGGTTGAAAAATAATTTATATATTGAAAAGGAGGAAAAATTCTCATAGAACATCATAAGAGCTTTAAACCAAAAGGGGAAACAAGGTTTAAGTAACTAAAATGGCCACTTAGTTTTTGTTTTTGCATTGCCCACCCCAGAAATGTAAGTAGTTGAAGTTTGGGTTATGGGAATATTATTAGTGCCTTTACTAGATCTCTTTCCTAGCAAAGTTTCTTTTTAGCTTAGCATAGATGTATCTTATCGCTAATCAGGAAAATCAGTTGACTTGGAACTATAAACAAAAATAAAACAAGATATTTATGAACCTCACTGAATCAGCCTAGAAAAATTGACTTTGGAGGTGCCAAAGCACCTGCCAAGATGCAGCCTGCACAGCCTTCTAGGTTGTGAATACCATTTGTACAGCGAGTTTGCTGTGAATTTCAGCTACTGCAAACTTGAAATTCTGATGCGGTTTTCCAGGGTGGTATTTTTTCAGAGTATTGAATTTACTATGTAGTAATTTATAGTATAGCTTTTTATATTAAAATGTGATATTTTTTAAAAGAGCTCTCTGGTTCAATTGGTGTCATGATGTGACTATACGATCTGCTAACCTACCCCTTGGGCTCACATTGTGCCAAACTGAGATGTACACATGTACGTGAAAAAAACAAAAAGCACATGTGAATGTGAAGTCTCTAACTCCGTTGCTTATTATTTTCAAATTAGTCTAATAATCCATTGATGTATATGCTTGAAATGGTTCTCTGTTTACTTTTGAATTTCGAGTTTTCCCGCTCGAGTTAGAATGCTCAGTTTTCTCGGATCACCTTAAGAAAATCCAAATACTCTTCTCTCTGAAAGTAAATGGTGAACCCAGTCCCTTGACTATGGGAGTGGCCAGACAGGTGCCTCCTTAAATCCTTCGGATTCGGCTTCCTCAGATGGACTCGTGATAATTAGAGGAAAGCAGGCTTTTGAGATGGGACAACTTGTAACTTTCTTCACCTTTTTGAGCTAAGGATATTGTCTCAGTCTCAGGAAGAACCTTTGTCCCATTTGGGATACCTTTTAACTAAAAGATGGCTAATGTGGAACCTGGGGCATGGTCTTGGCTTTTAATTATAGCTTTAAACCCAAATGATAACAACACAAGACTGTCTTAGAATAGAACTCTCAATGTCAGCTCTATATCAAAATCATATTTGAACCAGAGCCCCTATTTTAATTGTGCTATAAAGTCCCTTAAAGATTTCAAATGCTTCTAAAACCTAGTTAACATTATTCCTGAGCAACTTTTTTCCCCACCTTACAGAGTTTTTAAATCCAAACTATTAAATTTTTATGCTACAGCAAAATGAAATTATCAACCAGCAGTTAAAAATGTGTACTTAAAAATAGTTCACCATTTTTGTGCAGAGTACATGCCTATATGGTGGTAAGATTCTTTTAAACTCTAAGGGCAGTTCATCAGGGAAAAAAATAAATTTCAGTGCATGTTATGAAAATTATTTGCACTGTGCTAGTAAAATGAGGTTTTCATTTTTGTTTTATGTTGTGTTTTAAAGACAATTCTAAATCATTCCTCTGGAAAGCAAGACCTTAAACTCTTTATCTAGGGGGACTTTTTCTTCTTTTATGCAAATAGACGGTCTTGCATGGAGTGAAAATTATGCAACTATAATGTTATATAAATAGTATATGAAATTTGCTAATAGTATAATTTAACAGGAAACTGAAAGATATGTGGCTCCTCTATTCAGACTGAGTTTTAAATTACCTAATTTCATAGTCAGAACCTATTCTAGGTGGCCATCATCATAAACTCTGTTTCCCGATTATATCCATCTGAAGACTGAGAATCAAATTAGTCTTTCCTTAAAACAGTACTGTAACATGAATGTATTCATCTCAGTCAACAGAACTTCAGTGCCCCCTCCATGTGGAACTTACTTCCATGCTAATTTGGCTTCATCAGTAGTGTCTGCTCAGGTGAGACCTAGAACAAAAACAGCTGGAGTGAAATGGATCGCAGGGGTAGAGGTACCTGTCGAGGCAGAGCCCTGTGAGGAAGGAAGAGTTTTTCAAAGAACACATGGACCATAACTCTACTGGCGTGGCTGCCCTCAGCATCACACACCCGGTCTGAAGGAGCCTTTCCTGTTGCGGGAGCTCCTGCCTACATTCAGCCCACCCTTTCCTGCCTGCTTATTCTTCCTCCCAAGTGCCTCGGCCTCAACCGTGCTCACTCTCCTCCCCTCCCCTCGGCCCATCTTGGTGTGAACGCTGTTTCACAAACCAGACATCACCAGCCACCTGCTGATCATCACCAGCATTTACTTTTCCCAGTTACTTTTTCTCCATTCATGAGGAATAATACAACTTGTCCCAACTCCCTTGAAATTCCTCAATCATCTAGGTATATTTTGGCTCACCTTTGCCCTCGATCCCCTACTGGAAATTATGTAGCACCACGTGTGATCGCGTCCATCCCATACTGTTCTGCCCTTTCCCAGCTGCCAGAATATCTTGCTCTCCTCTACCTCATCCCCAAAGAGCCTATAAACTCAGAGTATCCAACCATTTTCATGGATTCACTCTCTGTTGTTCAGAAGTACTACTTCCATATTTTAAATAAATCATAGAAGAGTTTTGCCTTCTATCAAAGTAGGAATGTTTATATTTATACATGATAAGAAATCGAACTATTTCTACCATGCAGAATTTAGCATTTAGCAGGATTTTAAAGTGATTGAAATGCCATCCTAACCTGGATCTGTATTAGGTAGTAAATACCTGCATTAGTCCACGTTATTTGAATGTAAAGTGAAAATTCTCCAGCAGTCCAGACTAATCTGTAACCAATCAGTGGAACAGGAAATTTCTGGCATAGACATGGGTGGTGTTTCTGACATTTGTTTTATGGGTGTCATTTGGGCCTTGAAACATATTTCAAATAGAAGAACATACGATACACGGCATTTAGGTAGTCCCATTGGATCACAGAAGCCTACTGGATTTAAAATATAGATAAAATACCACAAAATTGGCTACCTAAGGGTTTGATCAAGCTTCCCTCATTGGACTAAGCTTGGAGCCCCTGTTCCTACCCTGTTTCTCGCTGGGGAAAATGAGCTGTGAGATGAAAAGGGAATGCACTTCCTTTGTAGTCCTTATTCCCCTGGCGTACTTCCAGGATATCCAGGCAGTATCATCCAGGAACAGGAAGCGCACAGAAGGGGAAGAAGCCACAGCACTTCCGGTCTGGCCAGTGCCTGCTTAGCGCGGTCCATAGACGAATGCTGTCAGGTTTCTAACGGGGGGGGTGTGTTCATCTGTAGACAGTTGTCTGACCTGAAGACAAACCCCACCCTGTTTGAAAGTACAGATTAAAATATTATGATCTGTGGTGGTATCCGGGTGCCTTCCACGCCCATTTGTGAACACCCCAACTCAAAAACAGAGTCCAGTAAATACCTTTAAGGGCCCAGGAATGAATATATGCCTAGTTAAGAAATGAGACTTGAATAAGTAGAGCCTGAAGGAATAGTTTTTCTTAAATCCTATGTTATAAAATGTTCCTTCTAGCTTTAAATTAATTATGAGTGCACCACCGTGAGGTCCAGAGTTGAAAAAGAAGGAATATGAGGATGGTGGGGGGTGGGGGGGACAGGTTGGGGGATGAATACCTGATTCTTTTCAATGCTTGTGGAAATCTTTGAAGTAATGAAATTCATACTATAGAATGGCCATTAGAACAAACACCCTATTTTACAGCTCATAGTACAACATCAAATGTTAGTAAGTCTAACTATGATAAATGTAATTTTGGGTATATAAATTTGCTAAAGCAGTCTATTTTCTTGCATTCCTCAGTTTAACTTCATAAAAAAATCAAAAGGAGAGAGGCTCTCTAGTCTTTAATGCTGAAGTATTATCAATCCTGATTAGCTTAAGTTTATGCATTATGACACCTACTGAATGAAACTGATTATACATCTCCTTTTAAGTTAATCAGTCTTTACAAGTTGTCGACTGATTCCCAAATCTGATAAGGAAGGATCAAAAAGTAGGATCAAGGAAATTCATCAGTTGGTAGCCAAGAAATTTCCTTTGTAATGTTGAGACTTGTTTTCTCCTTCCTGAATTTTACTGATTCTCTAAAATAAAGGGAAAGAGTTAAATGCTACCCTTGTTCACCAAGGGAAGTCATCCCAACTCTATACCTAGTGCAGATATTCCCTTTACATCTATATATCTTCCCTGGAAAGAAAATACCTTTTTTTCCCTTCCTCTTTTCTCTTTTCACATCTACTCTTTTTAATCAGATAAGATAGACAAAGAAAGCAAACCACAAGCCAGTTTGGCATCTTCTCCATGCTGATAGAATACTCACAGCCACATGCACAGTTGGAGCAAGGTTACACAGAACCCTGTCAGGTCAGCGTGGAGCATGGCCTTGCTACTTGGATTAGCTCCTTCAACCCTGAAAATAACTTTCCTGGTCATGGAACAACTGGATGTATCCTTTAGCTTATGAAATAGGATTTGAACTTGAAATCTCTCTTTTTTAAAAAGAACCTGATTTTGCAGGGCAGCTACATCATGAATGTATATATTAAGACTTTGTAGCTGAATTGCACACGAAATCAGATTGCCAACTTCTTATCTTTCAATTTTAGACATCATTTTATCCTTAAGTTGTGAGTGATATATGTAGCATGCTGTGAAATGTCTGTTATAGTTCTTTAATTCATCAGTATTAATACAGAATTATCTTTTTGCGTTCCTTGGTACTTTTTATTCCATGTAATCAGAAGCTGTGATGTTTTGCCTTTGTCGTCCTGTGCTTTGTTACTGTAATTTTTTTCTTTTTTACGAAGCACGTGACTTTGGACTAACGTGAGGCGGATGACGTGATCTTTAAGACTGCTATATATCTATCAGTCTCTTACTATATAAGGTTTCAATTAGAATAAGCTTTTATCAAATAGATCATTGATGCAATTTAGGATTCACACGATTTTCAGTGTCAAATGGCGATCTTACATTTATAGCTTCAATTCTGAAGACAACAAACTTGATAAACAGCCACTTTAAACTTGTTCTGGCAAATCAGACCCTGCTGTAGATGTAGTCTAAGTTAGTTAACCATATAAGCCTTTTCAACTATTATGCCCTCCACATGAGTCAGCAGTTAAGAAGAGTATAGAACCCATGAAAGCTTTTTGTATGTATAACTAGGTTTTATTTTTCTTATGTTGCTGATTTTACAATTCTGACTAAAGCTGACCTCAATGGATCAGTTTATGTGTAATATTCTAGTGCTTTAATGCCTCTTTTTTTTTTTTTTGGAGGGATGGGTAATATTATTTGAACAGCTACAGAAGGAACTGTTGGTGAGTCAAGGCAAACACATTTGAAATAAAGCAACTGTGTATTAACATGTTAACAATTCATAACTGCACTTTTTATGACATTTTGAAAATCTATTTATAGGTACAGAACAATGGGTTTTGTTAAACTGTATCACATTTATACTTGCAGAAATTTATTTCATTGTTATTAGTAGGAATTTTATTGGTTCAATAAAATTGGCAAAACTGAAC EMBV3_38184 CCGTCTGTGTGCCCTGATGGCTTCTGCTTCATGGGTCACTGGTTTTGCCAACTCCTTATT Gene GeneID:615902|LOC615902:XM_002697452:57_cdna Constitutive 0 NULL GeneID:615902 23 GENE LOC615902 NULL similar to hCG1805526 EMBV3_13292 GGGCTCAATAAAGGACAGAAATGGTAGGGACCTAACAGAAGCAGAAGATAGAAGAGGTGG Gene BVV0102_224505 + 0 NULL GK000005.2:63052823-63086352 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35716 AACAAGGCGGATCTGGAAACACAGCGCCAGGTCCCTCGATCTGAAGCCTCCACCTTCAGT Gene GeneID:616503|RRAS:NM_001038688:391_cdna Constitutive 0 NULL GeneID:616503 18 GENE RRAS MGC134597 related RAS viral (r-ras) oncogene homolog EMBV3_19325 CTTCACCTCGGACCTCTCTCACCAGTCTCCACTCAGCCTTCAGCAACACCTCCCTGTCCA Gene GeneID:512402|SHKBP1:NM_001082607:601_cdna Constitutive 0 NULL GeneID:512402 18 GENE SHKBP1 MGC140375 SH3KBP1 binding protein 1 EMBV3_18968 TTATGTTTACCTTTTTGCTTCACTCTCTGTCATCGAGTATTATCATCATGAACAAAACTC Gene GeneID:523017|C14H8ORF38:NM_001105389:51_cdna Constitutive 2 NULL GeneID:523017 14 GENE C14H8ORF38 NULL chromosome 8 open reading frame 38 ortholog EMBV3_00332 GTGATTTTGCTCCTTTGGTGGAACTCTCCTGTTCTGACATCAGTATCCCTGCAGCTGTCC Gene GeneID:531779|LOC531779:XM_002683748:2_cdna Constitutive 0 NULL GeneID:531779 15 GENE LOC531779 NULL similar to olfactory receptor Olr279 EMBV3_24357 TCCATCGCTCAGAATAGCCTGTAGTGTTATCCCTGCTTTTGGGTCGTTGAAAGTAACCAC Gene BVT0101_036081 + 0 NULL GK000019.2:46775848-46844164 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13776 ATGGCCTGCTGTTCTACTAGCTTCTGTGGCTTTCCCATCTGTTCCACTGCTGGGACCTGT Gene GeneID:788284|LOC788284:XM_002696014:436_cdna Constitutive 0 NULL GeneID:788284 19 GENE LOC788284 NULL similar to LOC514995 protein EMBV3_01662 GACTGCGATGCCCTGTGTTCGCCAACCTCAAAGGATATTCTGAAACCAGAACAACTTCGC Gene BVT0102_172629 + 0 NULL GK000011.2:48721561-48848623 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025002 TCONS_00025004 TCONS_00025003 1 XLOC_014634 NonCoding TCONS_00025002 XLOC_014634 NonCoding NonCoding - 11:48847056-48848334 - TSS18236 590 1 TCONS_00025002_2 60 3 0.540328895849648 0.00119693865074264 0 0.000400213094296406 0.000451492835415092 1.29028891002014e-08 9.82469580271517e-06 4.94210219950791e-05 0 0 2.09205158622017e-05 0 0 0 2.42524126205453e-11 0 0 0 0 0.00322101125115457 0.00119951472292276 0.000123486872519128 0 0 0 0.000528442196687654 0.000346302126426779 0 0 0 0 XR_249161.1 LOC101928113 PREDICTED: Homo sapiens uncharacterized LOC101928113 (LOC101928113), misc_RNA. 7e-13 78.8 87.30 0.105084745762712 0 noncoding GAGAGAGGGGCTGAGGTACTTAGTATTCTCCTTGCAGCTGTCACTGACCCCAGAGAGCTAGGCCTCGGCTCTGCTAGCCAGCCTTGGCCAACACTCAGGATTCAGATCTCCGGACAGAATAGCCTGGATCCTGCTTTTCAAAGTGGAACCGAAACCTACATCACAGGAACATGACTGCGATGCCCTGTGTTCGCCAACCCCAAAGGATATTCTGAAACCAGAACAACTTCACCGACCTTACTGAAGAGTCAACAAGTCCTACCGCACACCTGGCTGTATTAAAGAAACAACATATCCGTGCTTTCAAGTCTTTTAATTCCTGAACTTGGGGATTCACGAATATTCACGCTTTTAAAAACTGTATGCCATTTCCTCTCCAGATTCAAGGGGGACTCCAGAGATACGGAAATGAGCGCTCCAAACGCAGGGCCCCAGGAACTCCAATCCAGTGTTGTCTGCGGGTCCATCCTAGAGAATAAAGCACGTGACTCCATAAAGCCCCTTCATTCAGCAGCTCCGCGTCTACGAGTCCTCTGCGCAGTAAAGTCCTATACTCAGTCCAAACACCTTTTGTTCCTTCACCATCTAAC TCONS_00025005 s 5' 242 TCONS_00025005 s 5' 1519 EMBV3_16333 TGAAGAAGTCCGTCCAGAAAAACGTTAAAGCACAACAAAGAAAACTGAGGAGGCAAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00105 TAAACCCCGACCCCGTCCCCCAGTGGCGTCGACGAGATGGTTGAATGCTGTATTTTTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26725 AAAGCTGGCGGTGATCTGGCCTCCTCGCAGAAAGGCTTCGGAGAATGGTCTGGAACAGGA Gene GeneID:539805|LOC539805:XM_002688740:72_cdna Constitutive 0 NULL GeneID:539805 7 GENE LOC539805 NULL similar to hCG27535 EMBV3_30527 ACAAGATGTGGAAGAAAGTCATTGAGGAGGAACAGCGGTTGGCGGGCATAGAGGACCAGT Gene GeneID:536636|PDE3A:XM_002687752:114_cdna Constitutive 0 NULL GeneID:536636 5 GENE PDE3A NULL phosphodiesterase 3A, cGMP-inhibited EMBV3_15978 CCTCTGGAGGCAAAGAACATAGAGCTGAGTAGGCAGGAAACAGTCAGCAGGCTATAATCA Gene BVT0102_234591 + 0 NULL GK000029.2:30218950-30413001 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11036 GGAATTGGTGCATATCATGCTTGCTAAGTGCTTCCTAGTCTTTGTTTGGAGCGGTGGTTG Gene BVT0101_065967 + 1 EMBV3_17009 GK000018.2:60553042-60577951 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25008 GTCCGTAGTTATTTTTGTTACATATTCTGCATTTTTTCTAAAAGTACCCTTCAGTAAAGC Gene GeneID:520412|LOC520412:XM_002692105:325_cdna Constitutive 1 NULL GeneID:520412 13 GENE LOC520412 NULL similar to Protein FAM23A (Brush border protein AdRab-C) EMBV3_31567 AAGTGCAGGGTGGTTGTGAATGGGTTCTGCACATTTCTATCTAACCGGCCACTGCTCAGT Gene BVV0102_037832 + 0 NULL GK000015.2:65497392-65502376 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18578 TTCCCCTGAAGGGAGGCAGATTCTCTGTGCTGAGAAGAAAAGTATTAGTTAGGGGCTGCC Gene BVV0102_184287 + 0 NULL GK000014.2:40965788-41687280 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34244 CATCCTTTTATACCTGAGCTGCAAATACCAGACGGAGGCACACCGGTACCCGCCAGAACT Gene GeneID:789355|LOC789355:XM_002694693:288_cdna Constitutive 0 NULL GeneID:789355 17 GENE LOC789355 NULL similar to glutathione S-transferase, theta 3 EMBV3_10121 GTGTCCAGATGCAGGAAATGCCGGAAGCGCTATGATCCCGTGCCCAGTGACAAGATGTGG Gene GeneID:539087|MGC134419:NM_001038181:87_cdna Constitutive 0 NULL GeneID:539087 7 GENE MGC134419 NULL hypothetical LOC539087 EMBV3_00883 GGATCCCCCAGGGAAACAGGGGAAAAAGAAAGGCGCAAGTAATGATCCAAGGAGCTAGAA Gene BVV0101_018626 + 0 NULL GK000007.2:20041898-20191964 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27417 CGGCCATCCTTGTGACAGTCTATATGTATCACCACCCGACATCAGCAGCCAGCATCTTCT Gene GeneID:515731|PLXDC2:NM_001077928:100_cdna UTR3_Alt 2 NULL GeneID:515731 13 GENE PLXDC2 MGC139970 plexin domain containing 2 EMBV3_05242 CTATCTGCGCACGTTGCAGTCCAAGTTTGTGCTGTGGACGGGGAGGAGCTGCAGATGGAA Variant GeneID:512653|RABAC1:NM_001075575:196_cdna 449^608 2 EMBV3_38774 GeneID:512653 18 GENE RABAC1 NULL Rab acceptor 1 (prenylated) EMBV3_29968 ATCTGTAAACTGTAGATATGACTACTGACCTACCTCGCAGGGGGCTGTGGGGAGGCATAA Gene GeneID:535675|PTPRU:XM_002685680:320_cdna Constitutive 0 NULL GeneID:535675 2 GENE PTPRU NULL protein tyrosine phosphatase, receptor type, U EMBV3_43430 CCAAGAAGCTACTGCTGAGCCTTAGCAAAGACTGTGGGATAAAGCAGAAGAATGCTGTGC Gene GeneID:414345|CD86:NM_001038017:26_cdna Constitutive 2 NULL GeneID:414345 1 GENE CD86 NULL CD86 molecule EMBV3_03855 GTTTCTGCAGGTCCATTTTATACAACTTGAAAGACCTTAAAACTTTCTGGTTGCCACAAG Gene GeneID:615039|AKIRIN1:NM_001101236:301_cdna Constitutive 2 NULL GeneID:615039 3 GENE AKIRIN1 NULL akirin 1 EMBV3_17390 TTCAACAGTGCTGTGCCAGCCAACAGGAGGAAAGGCCAGACTCACAGAAGGCTGTTCATT Gene GeneID:614220|RPS27L:NM_001040578:133_cdna Constitutive 0 NULL GeneID:614220 10 GENE RPS27L MGC127652 ribosomal protein S27-like EMBV3_11906 GTTGAAAATTGGGCATAATTTCTGTAGTTGGTTCATTGAATTTTTTCTGAGGTACAACAG Gene GeneID:531907|EXOC5:XM_002690915:205_cdna Constitutive 2 NULL GeneID:531907 10 GENE EXOC5 NULL exocyst complex component 5 EMBV3_00358 CAGGACAGCATTGAGATCACTGGAACTTTTAAACACCGAAAAGTGACCCTCGTAGAAGAG Gene GeneID:535727|SLC27A2:XM_002690930:246_cdna Constitutive 0 NULL GeneID:535727 10 GENE SLC27A2 NULL solute carrier family 27 (fatty acid transporter), member 2 EMBV3_21683 GATGCTTGGGAGTTGCGTAAAGGGATGAACACACTTGTTGGCTATGACCTGGTTCCAGAG Gene GeneID:444878|COX5A:NM_001002891:34_cdna Constitutive 3 NULL GeneID:444878 21 GENE COX5A MGC133649 COX5A protein EMBV3_43432 TTTCCACTTCAGTGAGATCCACTCCTTCAATGTGCTGGAGGGCTGGTGGGTCCTCTATGA Gene GeneID:538688|CRYGA:XM_002685542:136_cdna Constitutive 0 NULL GeneID:538688 2 GENE CRYGA CRYGE CRYGF crystallin, gamma A EMBV3_38006 AACTTGCTTCCACAAGCAGCTCCTGAGCCTCCACGTTTCCTTCCATCTTCATCCCACTGT Gene GeneID:529930|LOC529930:XM_002693946:26_cdna Constitutive 0 NULL GeneID:529930 16 GENE LOC529930 NULL similar to Probable E3 ubiquitin-protein ligase MGRN1 (Mahogunin RING finger protein 1) (RING finger protein 156) EMBV3_16312 CCACACCTTCTGCGGCACCATCGAGTACATCCGCCCTTCACTGCAGAGAACCGGAAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15156 GCAGGAAGGGTCCCAGCCCATCTGTAAGCCATTAGAAGGCTGCTTACCATTTTCCAGGAT Gene BVT0102_124146 + 0 NULL GK000013.2:19339257-19911856 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15747 TCTCTGTGGTGACACTGATTTGAGGGCATGCATTTCTTTATCGCTACGTTTATTTAGGGT Gene GeneID:614589|ZC3HAV1:XM_002686998:862_cdna Constitutive 2 NULL GeneID:614589 4 GENE ZC3HAV1 NULL zinc finger CCCH-type, antiviral 1 EMBV3_12932 CCCCGGCGGCGGACATATTAACCGTCAGAAGGAAACTTCACCTGCCAAAGAGAGCTTAAA Gene GeneID:100336222|LOC100336222:XM_002690088:51_cdna Constitutive 0 NULL GeneID:100336222 9 GENE LOC100336222 NULL hypothetical protein LOC100336222 EMBV3_21892 GCCGGTCTCTTTACTTCTAGGCAAATAGATGGAGAAACAACGGAAACAGTGACAGACTTT Gene BVV0102_342704 - 0 NULL GK000005.2:75179910-75258028 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18205 GACTTGGCCACTTTCATCCTGCTTTACATTCTGCCCCTCCTCATCATCTCCGTGGCCTAT Gene GeneID:541301|GPR83:XM_002692916:26_cdna Constitutive 0 NULL GeneID:541301 15 GENE GPR83 NULL G protein-coupled receptor 83 EMBV3_42122 CAGCGACCTGAGTACCTTCCACCTGCTGGCCTACAGCGGCTACAAATATGTGGGGATGAT Gene GeneID:506336|YIF1A:NM_001034269:521_cdna Constitutive 4 NULL GeneID:506336 29 GENE YIF1A MGC127000 Yip1 interacting factor homolog A (S. cerevisiae) EMBV3_22312 TGTTTGTAACACAGATCCCCAAACCACTGCCCGTCTCTATTAGGGCCACATGGCTTTCCA Gene BVT0102_009924 + 0 NULL GK000018.2:25059259-25126946 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085799 TCONS_00085792 TCONS_00085788 TCONS_00085789 TCONS_00085791 TCONS_00085797 TCONS_00085793 TCONS_00085798 TCONS_00082658 TCONS_00085790 2 XLOC_051964 XLOC_051070 NonCoding TCONS_00085792 XLOC_051964 NonCoding NonCoding - 18:25081648-25085256 - TSS63980 3292 4 TCONS_00085792_11 78 0.292223572296476 2 0.0878846686997505 0.00728464763197853 0.00286729596251796 0.00570796019680474 0.00425383024786701 0.00368385292891314 0.000154965530053966 0.0034018288233635 0.00277242971625526 0.00503311352459595 0.0029275171339339 0.00181268575393208 9.30653952303393e-05 0.00203640476662496 0.00410729179681173 0.000877026736215423 0 0.000872917215215047 1.99032184780713e-05 0.00510218257803993 0.00343286066776057 1.20334724181938e-34 1.10833613099793e-20 1.27052287710093e-50 5.87755268691038e-88 0.0064685373882705 0.00501413104234148 0.00419762753291046 0.000232311780843466 0.000111700537546857 7.40009928130365e-05 XR_229535.1 LOC101908014 PREDICTED: Bos taurus uncharacterized LOC101908014 (LOC101908014), 2e-23 116 75.82 0.0543742405832321 0 noncoding CTGCCACATTCTGTCTAGGATAGCCAGTCACTCCAGGACCTCCTGCTTAAGATCTCCTGTCTAATAAACCATTGATGTCTCTGTTGCTGTTTCCTGGCCCGTCTTTGGTCTCAAGGCTGGCTTCTTTCAGGTTTGAACGGGTATCAGGACTTCCCCGCATGGCTCACTTCCTCCACCTCTGAAATGAAACCATCGGCAAAGCCAAGTGATACGTCATCTGCTAGCCATGGATCTAACTGCATTTTTATACTCCGGAGACCAAGCGTGGCCCCTCAACCAGCAGCATTGGCACCACCTGGGAGAGAGCTTGTTGGAGATGCAGACCCTAGGCACCACGCTCGGCCCACCAAGGTAGAAACTGAGCCTGAGCCAGGAATCTGTTTTAACCACCCCTGCAGGTAATTCTGATGTAGGCCAAAGTCCAAGACCCAGAGCACTAGATAACTTTCAAATAGCCTCCTAATTTGGGGTTATGAGTTGTATAAGCCCCTTCTCTGACCACCTGGCTTTAATTCATAGCTCCAGGCACAATGAGTGGTTACATAGTCTTTTGTTTGGCTAGTTAGGTATTATCTATCACTGTCCATGCCCTCTAAGCTTTATGATTCATGAAGTCAGGAGCTATGTGGGCCTGGCCCAGAGTAAGAACGAAACAGCTGTTGTTGGAAACCCATCCATACTTACATAAAAATGCTGGGGCCACAGTCACGGACTCTGATGTGAATGTGACCCGTGACCTTGAACAAGCATCCTGGTTCTCGGCCTCTGGAGCTCCCTGTGTGCAATGAAGGACGCTTGAGGGCCACTCCTCTTATCACTTTAACACAGGTTCAGGCTGACGCCTCCCCAGTCCAGCCGTTCTGCACCAGTGGCAAACCAAGGAACGTCCTTCCACACCCCACGCCAAAGCCGTCTATGTGCTGCTACTCCTTTCTTCGGGCCTTTAAGTCTCCTTGACGTGATCTCGACCTAACTCCTGGCCTGATTTGCAAGTCCTTTACCCACCTCCCAGAAAACAACCCCTCCCTCAGCCACCCTGGGATTCCTCCCCCTGCAGGCTGCCCCCCACCCCCACTCCCACCCTGGTCCTGGAACTGCTCTTCCCTGGCCAGGACACATCTGCTTGGCACTCTCTCTGCCCCTGAAGAGCTGCTTCAAACTGATTTCTGGAAGCACTCCAGCACGCCCAAGTCTTGGTTAACAGTTTCCTAAAAAGCATGATGTCCATAGTTAGACTCAAATGCAAGAAGGGAAGTCCTCAGGAACCAGAAATAAGAGGGGGCTCCGAGAAAAGGCAGGGGAGGAGGAAAGAAGAAGGGCACTCCGGGAGACGGGGTTTATAGCTGGTTGTTAGAGGACTCTGAACTTTTCAGATTAAAAAAAAAACTAAATAATATAAATTTTTTTAAGATTTTTTAAAAAAACCTAAAGGCAATGTGCTAACCTGGATTGGGTCCTAGGACAGAAAAAGTATATCAGTGAAAAAACTTGTGAAATTCAAAGTCTGGAATGTGGTTAATAGCAACGAACCCACATTGATCTCTTAGTTATGGCAAATGGGTGATGGCCGTGAATGAGCAGGGTGAGTTTGTTTCTTTATGCTTTTCTCTGTTTTCCACCATGTGCCTACATTACAGTTGGCTGTCATTTTCACGCATGAAGAGATATTGAAGGGACTTCCCTGGTGGTCCAGTGGCTAAGACTCTGTGCTCCGAATGGAGAGGGCCTGGGTTCAATCCCTGGTCAGGGCACCAGACAATGCTTGCCGCAACTAAAACTCCTTCACGCTGCAGTGAAGATCACAGATCTCACTTGCCACCACTAAGACTGTCAATCCCATTTGCAAGACAAAATCAAACAAGCTCTGAAGGCTGCAAGATTTTTTTACATTTTGTCAGCAAACGTGACCGCTTGGATGGAAGGCTGTTAATAATATTAACACAGTACTTATCTTGCTTCATGTGATCATTCATATGCCGAGAAATATCAGTGGGCTTGACTGCAGGGCATCACCGTGATCCCACGGGCGTGTCCTGTAACGTACCTAGTGTGCACGCACCCTGTACTACCTTCTAAAATCCACAGAATTCTGGATTTGGAAAGCCATGTGGCCCTGATAGAGACGGGCAGTGGTTTGGGGATCTGTGTTACAAACACCCCTGCCCTTCCACTCAGCTTAAGAAATCTAATATTACTAAAACTGTCAACTCCCCTCCCACCCCCTGCCAGGGGTACCCCATCCATAACTTGCACGATTTTGATGATCAAGAGGACAGCCATGTTTTAGAAACACAACCAGTCACAGCAGGGGCAGTGAGAAGAACTTGGAGGTTTCAGAGGCCCATCTGTGTGGGTGGAATTCCCACCCTCCAGCCTCCCCGCCTCCCTCTACCTCTACGCACCCACCTCAACTTTCCTGAAGTGAAAGCCACAAAAAGTTGCCTGCCTGGGTGTCGGGAGGGGACTTATACAATCATGGTGGAACCATGATACTCTTCCTCTCATAGGAGAGCTTGAGCATCTGGAGGCTGAAGACAGCTACCTGGGCCGGTTTGACAGGACATTGTGGGAAAGTAGAGGGAGACTCAGAGGGGGTCCCATGGCCTGGATGGGGGCCCATCAGAACCACTGTGGTCATCTGCCTCTGGAGATGGAAGGGCCAAAGCTGACCCAGCGTTCCCAGGCTGAGAAAAAAGGAAGCTGCTGAGCAATGCCTGGGGCCCAGGTCACCCCATGGCTAATTTGCCAATGATGTGGGCACCCTCTTACTCTCTTTGGCCCTTGGTTTTCTCGCCTGTGTGATAGGGAAGTAATCCCTTGCCTTGTCCGCCTCTCTCATCTAGGAAAAGGCCTCCTGAGCCTCGCCTTCTTCATCTGTAAAATGGGGATGATAATATTGGCTACCTCCAAGGGTTGTGGCAAAGATTAAATGAGGAAATCCACATAAAGAGAAGGAATTGCGCTTGGTTACTCTCCAAAAGATGCTGCCATTGCTTTTGTCTAACAATATTCATGACGTGGTGACCATGCTTCATTCCTGGGAGAAGAGGTGGGGGACAGTGCAGAGCTCAATACACTTGGTTTCTACCTTCAAGAGGCTCAAGGTTTCTCAGATAATCCCAGACCTAAATGTAAAATGGCCCCTGAGGAGTGTCTTAAACGACAGATGCACCAGGCTGTGGTTTGGGAGTCTTAGAGAGAAAACCTCACCTAGTTAGGGTGTGGGGAGGCCCTCCCCGAGGAGAAGGAAAATCAGATGGAGCAAGGAAGAGGGAGAGGACTTCTGGACTGG TCONS_00082660 r 5' 4933 TCONS_00082660 r 5' 4497 EMBV3_00606 ACCCGCCTGTGTGAACCCCCTGAGCCAAGGAAATCTTTAAGGGGGACAGAAACCAGTACT Gene BVV0102_204842 + 1 EMBV3_14758 GK000010.2:80970847-81017715 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30490 ACTATACAAATGTGCCGGAGAAAGAGCCAGATACTTCATGCTTATTATGTCTTAGAGGTG Variant GeneID:504618|PPEF1:XM_002700377:31_cdna 239^399 2 EMBV3_24989 GeneID:504618 X GENE PPEF1 NULL protein phosphatase, EF-hand calcium binding domain 1 EMBV3_14970 TCATTCATAGCCTATTTTCTTTCATCTTCCTTTGAGTACCAGCAATTATTTGTATGTTAT Gene GeneID:616674|CLEC4A:XM_002687820:120_cdna Constitutive 0 NULL GeneID:616674 5 GENE CLEC4A NULL C-type lectin domain family 4, member A EMBV3_09287 TGGCTTGGAATGGCTGGTTCTTTGGGTTGTTTTTTGGCTGGTGCTATCCTCACATGCTGC Gene GeneID:282184|CLDN16:NM_174519:36_cdna UTR3_Alt 2 NULL GeneID:282184 1 GENE CLDN16 NULL claudin 16 EMBV3_36566 ATTTCACTGGCTGGAAGTTTTCATGTGGCTGTGTGTGACTGCAGGGATCTTGGAGGGACA Gene BVT0102_431164 - 1 EMBV3_35058 GK000027.2:18072153-18244330 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00157496 1 XLOC_095951 NonCoding TCONS_00157496 XLOC_095951 NonCoding NonCoding - 27:18147440-18147872 - TSS117821 432 1 TCONS_00157496_1 35 0.405092592592593 1 0 0.000519662092456557 0.00087226033977358 0.000471268150394938 0.000595900404263712 0.000737148294098054 0.000434711342553803 0.00164692180410975 0.00173196689406961 0.00279442846819617 0.000147626189096704 1.05980895456014e-05 0 2.32465172620872e-05 0.000620665934107014 0.00138365170793584 0.000122275830565481 0 0 0.00221601469196761 0.00249703064498875 0.0012824522254825 0 0 1.94034979318955e-05 0.000473124954773118 0.000774674451537137 0.000895148314432679 0 0 0 0 noncoding 0 0 0 0 -0.141907704588205 0.295948944137132 0.00959802981830971 0.88461226921995 TCATTTGGATCACACATCGTTTGGATTCTGTTGATGTCTAGCAAGCTTGAGGGGACAACATGGCTATGGCAGTCATGATCAGTGCTCACCAACATCTAGTCCTCTTCTTTCTGGGCACACGGAAGACTGTCCCTCCAAGATCCCTGCAGTCACACACAGCCACATGAAAACTTCCAGCCAGTGAAATGAGAGCAGACATGCTATATTTGTCACTTTCAGCCTGAAGCCATGAAAAACCTCTACACAACGCTAAGATTCTCTTTTCATCCAAGAACATGGAGGTCTTACATGGACTTCACAGACAAAAAGATTAAAGTGGTCTGAATTGCTGAGTCATCATGTGGATGACAGCTGCCTTGGAAAGTTGCCCAGTACCACAGAGGATTCATATAAATTTTTGTGTGCCAAGTAACTGAAAAAAAAAAAAAAAAC TCONS_00155125 . 5' 96350 TCONS_00155125 . 5' 96350 EMBV3_38102 TCAGATTCAGGAAACAGAACCACCAGCCGCTCCACCCGCACGTGTGTCTACTCTGATTAA Gene BVT0101_004907 + 0 NULL GK000020.2:70191094-70499027 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115296 1 XLOC_069505 NonCoding TCONS_00115296 XLOC_069505 NonCoding NonCoding - 20:70256142-70262216 - TSS85791 1732 3 TCONS_00115296_4 85 3 0.715297217190845 0.00027956054144394 0.000352951655956708 0.000278533260372509 0.000827576764135831 0.00029421767980956 0.000121767733821195 0.000150350040002634 0.000375645436570999 0.000206743763256948 1.42534731204793e-05 1.32169889518005e-06 0 5.58839275861315e-05 1.65430339316803e-26 7.36503561803911e-11 0 0 0 0.000474413263193213 0.000422285663802721 0.000133207720272818 0 0 0 0.000333688837301547 0.000291318212347457 0.000336898867188052 1.86812520668424e-09 0 0 0 noncoding 0 0 0 0 -0.184172857703096 0.309192860906245 0.0498603446899533 0.571983355273219 CGCACCTGAGTCATGCTCACTCACCGCCCACTGCGTTCATTGCGTTACCTCTGCTGGATCCGCTCCAGACTTCCAAATTTAGCAATCCTCTGCTTAGGCACGGCTTCTTGGAGTCCTAGCCATATCTTAATGATGCAAAAAAAAAAAAAAATGCGCAGCCCATTAAACACGATCTGATGGCTATCTGCAGCTTGAGCGATGTAGCTGACAGCTCAGAATGAAAGGAAGATACAGGAGGCCCCACAACTGTGCACGCAGAGCACACTCAGTACAAACAAGGACAGTAGATTACATCTTTCCAATAAACCGGAGGCTCATCCCTCGAACTGCCCGCCGCGAACCGCCGGGGCCTCCTAACAACCCGGCTAACGATGGGGCGTTGGGGGCGGGGGGCCAGGGACCCCATGTGAGAAACCGCGGGTCAGGTGCAGGCTGCCTGCCCAGCTGAGACGGCCGTTTAATCTGTTATCCCAACGTGGTTTGTAGGAACAGTAAACTGCACCCAGATTTTAAAGGATGAAAAAGGTCTCCACTGTTTCAGACCTCCACATCCACCGGGTGATGTGAGGGGGCGCCCTGCGTGGCCCCCGGTCTTCTCTCTGGAACAGAGGAATGAAGCTCTGGTCTTCAGGGGTCAGGTGAGGGGGTCAGGAGCAGGGAAGTTGGGCTTGCAGCCTGCCACCTAAGTGCCCAGGAACTGCCCGGGCAGAATTCAGCTCTTCTCCAGAAAGCTACTGGTCGTGGGCAGGCTGGATTTGCTCTTGGGGTAAAGTTCCTTCTTAATGAGCTGCAATTCTTGCTCAACAGCCAGCCCCCACCCCAGGCAGTCTCATCAAGATGATAACATCAACCCAGGTGCCGGGCAGTCTTTAAAAGTCGTAAATCTTCGCAGTCACCTAAGGGAACCGGAGGAAAAAAGGTGAAACAAGTTTGCAAGAACCTTTCCCAGGTGTTATTTTGCAAGTCCAGAGCTAATTGATGGTTCTGCCACAATAGCTACAAGTGATAAAGATCTGTAAACACTCCACGCTGGAGGCAAGTCGGGGAGTCCCCAGGGTGTGCAGCCGCCAGATGGAGCCGCTGCCTCCCGCAGGCCAGCACCCCTGCGCGGCCTGGTGGCTCGGAAGGCTGGGTACCACCGGAGTCAAGAGCTCGGGATCCACGCGCTGGCCATTTTCACAGCATCAGCCTGGGTTTGGAATGACTCACTCCCGGAGAGCTGGTGCTTGGTGGGAGCAGAAAGCTGGCGTCGGGGGCCCGGCTCATGAAACCTTCAGATTCAGGAAACAGAACCACCAGCCGCTCCACCCGCACGTGTGTCTACTCTGATTAAAGAGAGATCAGTAAAGGAGGGGAAACCATTTCTGTTTGAGGAACTTTGCTGCTGCGCTCCGCGGTGGACATCCTCTGCCTCGTGCTAAATGGAGCTTAACCCGGAGAAAGGAACACATCTGGAAAAGATGCCGAGGTGGCCGCAAGGGAGGCGAGGAGGAGAAGTGCACTCGGGAGAGGGTGAGGGGCCGCTGCTCCGGGGCCGGCGGGGACGTCTCTGGACAGCAGCGCAGGCTTGCATTGATCATTTTTACGTTATCAACATAATAAAGTTTTAAAAAACCTCTCTGCTCGAGAAAGAAGAAAGCACAGCTACTATCCTTTCGCGTGTATAGGGTCTTCGCTGGCACCAATTCTTAAACATTCTCTTGTAAATTATTAAATTGCATTTCCTTTCGAA TCONS_00114177 r 3' 64920 TCONS_00114177 r 3' 65374 EMBV3_21303 GACTGGGAGAACCGGGAAGTTTCCACAGGGGTCGTACATTGCCAATCGAGTGACTGACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21443 AACAGCCATGCACCCACAGTGGAGACAATCAGGTGGAAAAGCCATAGTGCCCCTTTGGAA Gene GeneID:516426|LUZP1:XM_002685715:412_cdna Constitutive 0 NULL GeneID:516426 2 GENE LUZP1 NULL leucine zipper protein 1 EMBV3_17341 CTAAATGTCCTTCTTCGGACACGTCGTTCTGAAGCCGCCTCAGCCCAAGGCTAATCTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28675 GGTTCTGTGGCCCTTTTTAATCTGACCCCTGAGTGCCAGTTTCATGTCCATTACATTGCC Gene GeneID:617988|TMEM87B:XM_002691155:194_cdna Constitutive 0 NULL GeneID:617988 11 GENE TMEM87B NULL transmembrane protein 87B EMBV3_09870 TTTAAATACGGAGACCTCCTGGGACACTTGGAGGCATGTTTAACAGAATGGCAAAGTGGG Variant GeneID:529186|CLN5:NM_001046299:24_cdna 337^562 1 EMBV3_14466 GeneID:529186 12 GENE CLN5 NULL ceroid-lipofuscinosis, neuronal 5 EMBV3_33695 GCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTCCTTATTAGGCCG Gene GeneID:781186|LOC781186:XM_002696249:7_cdna Constitutive 0 NULL GeneID:781186 20 GENE LOC781186 NULL similar to ribosomal protein S15a EMBV3_38759 AGCTTCATCCTCCTAAAGTGGAAAGCTGTGCCATGCACCCCAAAAACAGCTCACCCCCAT Gene GeneID:100336769|LOC100336769:XM_002698910:97_cdna Constitutive 0 NULL GeneID:100336769 28 GENE LOC100336769 NULL oncoprotein-induced transcript 3 protein-like EMBV3_18921 GGCAGCCTTGCCTATCCCAACCCTGCTGTGCACGTGTCTTATAAAGAGTGACCCTGAATT Gene GeneID:786159|NCAPD2:XM_002687879:175_cdna Constitutive 0 NULL GeneID:786159 5 GENE NCAPD2 NULL non-SMC condensin I complex, subunit D2 EMBV3_32882 TCTCATCGCTAGACTTACGTTAGAATCCTGCTCTCAGGTGCCTGCTTGGGTTTCTCTGGA Gene BVT0102_020728 + 0 NULL GK000027.2:38389289-38418421 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155648 TCONS_00155646 TCONS_00155649 TCONS_00155650 TCONS_00155647 TCONS_00155651 1 XLOC_094784 Coding TCONS_00155646 XLOC_094784 Coding Coding - 27:38386525-38391086 - TSS116417 2440 2 TCONS_00155646_7 156 8 0.466666666666667 0.0246581061063478 0.00954552248310531 0.0146147976630558 0.00985220606210595 0.00902637384331691 0.00483775420214239 0.00397376981914192 0.00360026690800252 0.00550984901102821 0.00146027597814492 4.56999072437117e-05 2.20509775757161e-30 0.00104836829659332 0.000238457053655229 0.00011701401378591 1.21356019972467e-12 9.19889156501539e-13 8.24171869552314e-15 0.00712074697131526 0.00776372264487278 0.00103610801078262 0 0 5.82980510705795e-15 0.00107852390953214 0.006927838936887 0.00337166446257101 0.00108008786707971 2.72644423208924e-10 0 XM_005217040.1 LAD1 PREDICTED: Bos taurus ladinin 1 (LAD1), transcript variant X1, 0.0 1227 86.00 0.422950819672131 NM_005558.3 LAD1 Homo sapiens ladinin 1 (LAD1), mRNA. 1e-67 262 74.94 0.158606557377049 TCONS_00155646_3 sp|O00515|LAD1_HUMAN LAD1_HUMAN Ladinin-1; 4e-38 137 56.39 0.942857142857143 1 noncoding 0 0 0 0 -2.3151066344351 0.00266066725077071 -0.0881964845172011 0.246704299634319 NATCTCTGGCTGCCTGCCTTTCTCCTGTCCTCCCCCTTCCAGGTCGGCCCCAGCTGTGTCTCCCCTCCCTGCCTGCTCTGTTGCCCGCAGGACAGGGGACTGGGCTGGGATCTCACCTGGCACCCACACCACACTCTCATCCCAGGCCCAGACTCCAGGAAAGCCTCAGATGCTTCTGGAAGACCCCCACCCCCCCACCCCCCGCCGTCATCCCTGGAAGCCCTATCCACTGGCCTGGCCCTGGGCCCGTGGCTGCACCCCCACAGCCGAGGCAGCACGCAGGTGAGGACTCGCAGCACGGAGGCTGAGGCCAAGGCCCCCTCGCCAACACGGGTCTTGCCCCGCTTCAGCAGCACCCTGCAATGCTCCAGCACCCGCACCATCCCCAGGATGAGCCCCCCTAGAGACAGCTCAGAGGTGGCCTTAACCCACAGTACCAGCATGAGGCTCCCAGCCAGCTCGGTCAAATTACGCCCGAAGCTGGAGCAATACCTCTTGGCCATACAGAGATCAGAGTCTGTCAAGTGTGCAAACCCATCCTGCACTGACTTCCTCGAGGCTCCTGTGGATGTCTCCAGCATGCGCCACCTCTTCGAAAAGGAGCTGGTGGGCCAGAGTCGAGAGGGCCCAGCCTCCAGGCACAAGGAGAACTTGCAGCTCTCAGGGGTGGTGAAGTCACAGCTCAAACTGTGGAACAGCAGGATCCAGGAGTCAGCACAGCAGGTCCCACAGAACCAGGATATGCAGAGGGATTTGGCAGCTGGCAGGAGGCCCCAGTGGAGGAAGAAGCCAGAGCCCCGACTGGGTCCCTAGGTGTGAGGAGCCAGTCCCAGGCCAGCAGCCACGCTGGTTGCCTCTCCCACCCGCTTTCCACACTGGATCCAGGAGGACACTGGCCAGCATCCCCCCCACCCCTCTGGGGCAGGCGTGCCCTGTGGCTTGGCTGGCATCTTTCCCGCACCCCTGTTGGGTCAGGCGTGCCCTGTGCCTTGTTCAGCTGCGGGTACTGCGCATCTGCACAGAGCCTCGCCACCCTGTCCACGCAGATTCCTGCTCTTCCTCCTCTTCCTTCTCTTCCTTTTCCTCCATCCGGTGGCACCAGTGTCTCTGTGCACCTCTCCCAGGATGGCCCCCACCATCCTTGTGCCACCTGCCAGGCTGGAGGAGCCACACTGACCCCTCCCAGGCCCTGCCTTGCTCCCCTTCACGCCCCACCTGCTGCCCTGGCCAAGCCATCCTGTGCCCCCTCCCCACACTCAGGAAAGAGCAGATAAACTCATTCACTCTCAGGTGTGACCAATAATAGCTTAAAAATCACTCTTTTCGGAAGCTTTGCTTTTCAGTGGAGACTAAACAGCGTGGGGATGATGTTTTGGCTGTGGGGGCCTGAGGGGGGCAAGCATTTGTCTGTCAGCATCCTCTGTGGCCACAGCCCAACACACTTGCCCCCAAATGCAGTTCTCTGCTCCCCTGCCCTCCTGGACCAGAGGGGACGCTAAGCTGTGGGTAGACCAAGCAGCCAGAGCCAGCCTGGTGCCATCAGCCCTGCGTGCTGTGTGTGGCTGAGGGGTGTGGGGGTGTGCGTACGTGTGTGTGCACACAATTGTGTGTGTGGTCCACACGTTTTCTCATCGCTAGACTTACGTTAGAATCCTGCTCTCAGGTGCCTGCTTGGGTTTCTCTGGAGTCAGTGACACCCCATACCTCCTTTGCCCCAGCCCTGCTGTGGGCCTGGTCCTGTGGGAGGCTCCGGTCCCACGTACAGCGGCCAGGGATGGAAGGGCCTTGGGGCCCCACCTGTGAGCCCAGACTCACCTGCCTCCAGCAGAGGGTCTTGCATGGCCGGCCCCATGCCCGCCCAGAGCTGGGGGCAGCGGGACCCGGAGGCCTTGGCCAGCCATCCCCACCCACCACCACATGTGTAACCTCGGAGTTCCCGGGAGGAGCCAGGAGGGCGGGGCTGGGCACCCCCAGAGAGGTATGCCCCACCAGGAACTGTCAGCAAGCAGACAGAGGTGCTGAGCGCTTGCTTGCTACACTCAGGAAGGTCCTGGTAGGTGGGTTTGCCCAGCACAGCAGAGCCATCCCTCCAGCATGGGGGTCTGAGAGTGGCCCGAGGGATTTGGCCCACCTGGCCCTGGGGTTTGGGCGTCTGGTGCTGCTGCCCCCGGGGGGAGCCCTCAGTGCCCATCAGGGCTGCCTGGGCAGGGTGCAGAGGGCAGCACCACACCACCCACCCTCTTGAACTCACTCATCTACACAGAAGGCCCTGCACTCACCCTTCGGGGGGGGGTGGGTCGCACACCCAGGGCGACCTCAGGGTGACATGTGAGGGCAGCACATAGCCTGGGCGCCCACCTGACTGTGCCCGCCTCCCGTGCCAGGCCTCCTGTGGGTCCTCAGGGCTGTGGGCACCATCTCTGTGTTCTCGTCCCTCCTC TCONS_00155652 TCONS_00155653 TCONS_00155654 TCONS_00155655 TCONS_00155656 TCONS_00155657 s 5' 27336 TCONS_00155652 TCONS_00155653 TCONS_00155654 TCONS_00155655 TCONS_00155656 TCONS_00155657 s 5' 31896 EMBV3_03666 CCAAGTTTCTTTCCCAGGACCAAATTAATGACAGAAATGGAGAGCTGGATTTCTCTACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32404 TGCTGGGTGAATAGAACCTGATGGTTTACTACTGCTTTGCTGAGTTGCAAACAACTGTGC Gene GeneID:508918|SCP2:NM_001033990:31_cdna UTR3_Alt 4 NULL GeneID:508918 3 GENE SCP2 MGC127405 SCPX sterol carrier protein 2 EMBV3_30544 CAAAAAATCTTCCAGCAAACAAAAGCCCAGGTCCAGACGGCTTCACAGCTGAATTCTACC Gene BVV0102_167004 + 0 NULL GK000004.2:34666936-35563537 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152751 TCONS_00060450 TCONS_00238892 TCONS_00233446 TCONS_00064860 TCONS_00224115 TCONS_00023028 TCONS_00162600 TCONS_00135549 TCONS_00115689 TCONS_00135527 TCONS_00249014 TCONS_00207066 TCONS_00254141 TCONS_00060447 TCONS_00091329 TCONS_00110347 TCONS_00250238 TCONS_00060451 TCONS_00206538 TCONS_00187632 TCONS_00223458 TCONS_00200006 TCONS_00189808 TCONS_00139971 TCONS_00229877 TCONS_00098383 TCONS_00254568 TCONS_00122496 TCONS_00162777 TCONS_00060449 TCONS_00198911 TCONS_00197542 TCONS_00252355 TCONS_00187395 TCONS_00209635 TCONS_00250940 TCONS_00136862 TCONS_00196842 TCONS_00063064 TCONS_00088085 TCONS_00023027 TCONS_00031937 TCONS_00253241 TCONS_00197506 TCONS_00177939 TCONS_00124128 TCONS_00135700 TCONS_00037712 TCONS_00098584 TCONS_00060448 TCONS_00141271 TCONS_00109860 TCONS_00107450 TCONS_00231501 TCONS_00251931 TCONS_00039653 TCONS_00162513 TCONS_00039852 TCONS_00210179 TCONS_00056147 TCONS_00190575 TCONS_00233374 TCONS_00060446 TCONS_00033237 TCONS_00252935 TCONS_00040696 TCONS_00207276 TCONS_00011865 64 XLOC_092516 XLOC_036736 XLOC_145558 XLOC_142928 XLOC_039584 XLOC_137411 XLOC_013698 XLOC_099481 XLOC_081772 XLOC_069858 XLOC_081750 XLOC_151957 XLOC_125585 XLOC_157079 XLOC_056104 XLOC_066251 XLOC_153181 XLOC_125060 XLOC_113677 XLOC_136758 XLOC_121658 XLOC_115845 XLOC_085033 XLOC_139371 XLOC_058629 XLOC_157500 XLOC_074051 XLOC_099658 XLOC_120564 XLOC_119203 XLOC_155296 XLOC_113441 XLOC_128146 XLOC_153883 XLOC_083073 XLOC_118507 XLOC_037791 XLOC_052872 XLOC_013697 XLOC_018182 XLOC_156182 XLOC_119167 XLOC_107712 XLOC_075680 XLOC_081923 XLOC_021541 XLOC_058829 XLOC_085699 XLOC_065764 XLOC_063360 XLOC_140990 XLOC_154872 XLOC_023470 XLOC_099394 XLOC_023669 XLOC_128689 XLOC_033950 XLOC_116610 XLOC_142856 XLOC_019471 XLOC_155876 XLOC_024512 XLOC_125794 XLOC_007415 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_31555 AAAGGAGTAGGAGATTAAAAAAGCGTGTGGAATGTGCTTAGACCCGCGCACAGTACCGCC Gene BVT0102_327513 + 0 NULL GK000013.2:82368774-82399792 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044205 1 XLOC_026150 Coding TCONS_00044205 XLOC_026150 Coding Coding PFDN4 13:82391380-82402819 j TSS32542 929 1 TCONS_00044205_1 127 4 0.919129218394824 0.000372759973585998 0.000468147820619617 0.000268709050021518 3.00729504086891e-05 5.00029852836534e-25 5.35073708769123e-26 1.02153764294716e-25 4.01075363723161e-05 2.15986788765966e-28 0.000137655153858695 3.28732205325558e-30 1.73656890480771e-28 4.21068024717312e-59 3.16801813368068e-05 3.14080214382066e-30 0.000546536898021365 2.54020767913414e-26 8.20956417558599e-27 0.000651407174507441 0.000961956666416683 3.82208553000668e-92 0.000101393510296835 3.04883502223128e-05 9.20015883553321e-33 0.0012039969840409 1.08410085488196e-34 0.000257089969541968 7.67145933635041e-05 0.00039339739997334 0.000136528274000013 NM_001038540.1 PFDN4 Bos taurus prefoldin subunit 4 (PFDN4), mRNA. 0.0 1155 100.00 0.68783638320775 NM_002623.3 PFDN4 Homo sapiens prefoldin subunit 4 (PFDN4), mRNA. 0.0 978 93.83 0.689989235737352 TCONS_00044205_1 sp|Q2TBR6|PFD4_BOVIN PFD4_BOVIN Prefoldin subunit 4; 2e-86 252 100.00 0.984251968503937 1 coding 0 0 0 0 -1.29679411422972 0.0812887092726609 -0.125261220974797 0.147709031847144 GTGAGAGCATCTGATGTACTGAGGCGGTACTGTGCGCCGGTCTAAGCACATTCCACACGCTTTTTTAATCTCCTACTCCTTTTAGGGTCATGCTGCGTTTGTTTTTATTTTCCAAGTGAAGAACCTGAACCACAGACGCAAAGTTAGGGTTGAAATAAGTAAAGATGGAAGTTCTGCCTCCAGAGTCTCTGTGTTTAACTTCCATGGTGTCTGATGAGAGTCCGCTGCTGAAGGCATTGGCTCCGTAGGTTTTGTCTGCTTGCTTCAGTCCACTTCTGAGACCGCATGGCTGCAGAAGATGTCAATGTTACTTTTGAGGATCAACAAAAGATAAACAAATTTGCACGGAATACAAGTAGAATCACAGAGCTGAAGGAAGAAATAGAAGTAAAAAAGAAACAACTCCAGAATTTAGAAGATGCCTGTGAGGACATCATGCTTGCAGATGACGACTGCTTAATGATACCTTATCAGATTGGCGATGTTTTCATTAGTCATTCTCAAGAAGAAACACAAGAAATGTTAGAAGAAGCCAAGAAAAATTTGCAAGAAGAAATTGACGCCTTAGAATCCAGAGTGGAATCAATTCAGCGGGTGTTAGCAGATTTGAAAGTTCAGTTATATGCAAAATTCGGGAGTAACATAAACCTTGAAGCTGATGAAAGTTAAACATTTTATAAAATTTTTTTTAATTTGTTTAATAAACTTGAATATTGTTTAAAATGATAATTTCCCTTCTTCAAATGAAATGGAAAGCAAAACTTTTTTTAAATTTTTCATTTATTTAACGGAAACTTGCCTATTTTCATGTCTTGCTTATTTATTTTATATTTTTAAAAGAAGACAGTATTCATCTATGTATTTTGCATAACAGTTATATCAACTGTAGGGGCTTCATGTCATGTTATTAAAATCAGTTAAGCAGTCTT EMBV3_10037 TCTATGGGTCTCTAGCCATGTGACCTCAGGCCAGTTGCTGACCTCCTTAAGCTTTCCCTT Gene GeneID:100140410|LOC100140410:XM_002698229:834_cdna Constitutive 0 NULL GeneID:100140410 25 GENE LOC100140410 NULL hypothetical protein LOC100140410 EMBV3_29379 TCCCAGACTCCTGGAAGAAGGAAACTGTGCCCAAATTATCTCCGGTTCTTCGCTCAGTTC Gene BVV0102_400216 + 1 EMBV3_04401 GK000029.2:33577320-33601486 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165012 1 XLOC_100381 NonCoding TCONS_00165012 XLOC_100381 NonCoding NonCoding - 29:33584779-33589636 - TSS123340 918 2 TCONS_00165012_1 82 3 0.811573311367381 0 0 0 0.000144734461211657 0 0 0.00054314909226516 0 0 0 1.99493113463953e-05 0 0 0 0 0 0 0 0 1.54350099001227e-12 0 0 0 0 0 0 0 0 0.000523016629504255 6.54929250440981e-06 XR_240640.1 LOC101902283 PREDICTED: Bos taurus uncharacterized LOC101902283 (LOC101902283), 0.0 1624 100.00 0.979302832244009 0 noncoding 0 0 0 0 -0.0574766615901455 0.631946140020751 -0.00115109495553242 0.983768564667393 CTGCATGTTGTTTTATATAGATCATCACAGAACCGAAGACCGAAGACTCAGTTAGTCTCATGAAAGAACTAGGAAAACAAACCCAGGGAACTGAGAGGATTTAACCCAGGACTGACGACTCGGTGGATGACTCTGGGGTCCTTGCGCCCAGCCCAGACCAGCCCTGGAAGATGGTGGCTCATCTGCTCCTAGAGGAAGGGAACGAGGAGGGGGATGGGAAGAGGAGGGTGGGGAGAGGACAAAAGAAAAGAGCTGGAAAGATTTGAACTTCTGACCTTGGCTGGGGCAGAGCCAACGTTTTTGCTCCTCTTTGCTTCTTTCACCCCATGGCTTCTGCCCCTTGGCTGGGGCAGAGCCAGGATAACGGAGGACCCCAGCCTCCTCCCAGACTCCTGGAAGAAGGAAACTGTGCCCAAATTATCTCCGGTTCTTCGCTCAGTTCCGGGGACAAACACAGTATGAGAGTGACGTTTGCTGGACTGGATGGATAGTTAAATGATGGAAGGTGATCATCAAAGGTTATGCAGGACTTTTCACATCTCCAGGAAGAGTTCCTCAATCATTCCAAACACACAGGTGTCCTTCTGGGAGGCGATGGGGAGTGTTGCTTATCAGCCCCCCGTGCCCTATCCCTCTTCTCGCCCAAGCCCTGCTCCTCCACTTACTCAGAGAAGGCGCTGTGGCTGACACCCTGAGCCCTGACCGGGAGCTGGCATCCATCATCCTTAAGGCCCTCATCCTGGGAGAAGCTGATCCCATGTCAGGCTTTCATGTGGGCATGTCACAATTTGGCCTTGGTGGTGGTGGTGGTGTCATGGCTCCCTGTGCGCCAGTGAACAAAGAGGCCCTGGGTGATGCTGACCGCAGGCAGAGGGGAGAGGCTTCCTCTCTCACCCACGGCACATGTGATTCCTTTGC TCONS_00165009 s 5' 7441 TCONS_00165009 s 5' 7782 EMBV3_27366 CCCACCTTGCCCAATCCGTGTGACCTCCGGCTCGGCCAGGAAGTGACCCCATGTGAATAA Gene GeneID:505677|ALDH1L1:NM_001103087:14_cdna Constitutive 0 NULL GeneID:505677 22 GENE ALDH1L1 MGC179366 aldehyde dehydrogenase 1 family, member L1 EMBV3_12548 TTTCTGTGGGATTGCTGATTCTTGGCAGGCTCCTTGAGTGATGGGTTTCATCCTGGGGTC Gene GeneID:535442|SGSH:NM_001102189:5_cdna Constitutive 1 NULL GeneID:535442 19 GENE SGSH MGC159451 N-sulfoglucosamine sulfohydrolase EMBV3_05575 TTCCAGAAGTGCTCACTGGGACATAGCTGACACTCTCACAACCTCCCTAGGCATTCACAT Gene GeneID:525500|SDR16C6:NM_001099707:35_cdna Constitutive 0 NULL GeneID:525500 14 GENE SDR16C6 RDHE2 short chain dehydrogenase/reductase family 16C, member 6 EMBV3_18929 CCGGGGGACATCTGCCAAACAGGCCCAACCCCCCAGAACTCAGGGCACCCCGGCCTTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39068 ATGCCTGTTTTGCAGATGAGGAAACTGAGGTCACATCTAAGTCAAGACATCCAGGCAGGG Gene GeneID:515669|PLCB3:XM_002699329:176_cdna UTR3_Alt 2 NULL GeneID:515669 29 GENE PLCB3 NULL phospholipase C, beta 3 (phosphatidylinositol-specific) EMBV3_25709 AAACCCTATGGATGTGTTGAGTGTGGGAAAGCATTCAGCAGGAGTTCCATCCTCGTGCAG Gene GeneID:538969|ZNF24:XM_002697677:168_cdna Constitutive 0 NULL GeneID:538969 24 GENE ZNF24 MGC137563 zinc finger protein 24 EMBV3_18343 ACACTGGAATAGCAGGTGGAGTACCCAGATTTTTCACCTTGGTTGCTCTGTGACCTTGGC Gene GeneID:615481|KLHL32:XM_002690173:8_cdna Constitutive 0 NULL GeneID:615481 9 GENE KLHL32 NULL kelch-like 32 (Drosophila) EMBV3_42824 CCTGAACACATTTATGTGTACGTCTATAACCCCACGAGCATGTTTATAGTCAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_08698 CAAATGATCCAGGAACTTCTGGGCCACACTTGGATGAATTACACGGCCATTCTTTTCACC Gene GeneID:100138214|LOC100138214:XM_002688107:194_cdna Constitutive 0 NULL GeneID:100138214 6 GENE LOC100138214 NULL similar to hCG2036814 EMBV3_32155 GATCCAAGTTGAACCACCGAATGGCACTCTCTCTGACCCCAACAGCACCTCCCCAGGGAT Gene GeneID:613529|LINGO4:XM_002686037:224_cdna Constitutive 0 NULL GeneID:613529 3 GENE LINGO4 NULL leucine rich repeat and Ig domain containing 4 EMBV3_12951 GCAGGTAGATTCTTTACCACTGAGCCACCTGAGACAGACAGAAAGAATAAGACTGTTGTC Gene BVV0102_281770 + 0 NULL GK000007.2:16620462-16648312 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18111 AAGGCAATCTGCTGGGTCAGCCTTGGTACTCAGGGAACTGTGACCGCCATGCTGCTGAGA Gene GeneID:616440|SH2D6:XM_002691407:365_cdna Constitutive 0 NULL GeneID:616440 11 GENE SH2D6 NULL SH2 domain containing 6 EMBV3_10045 CACTCCTGTCCCCCCGGCTTCCATGGGGCTGGCTGCCAGCAGACGTGCCAGTGTCAGCAT Gene GeneID:616459|MEGF6:XM_002694177:624_cdna Constitutive 0 NULL GeneID:616459 16 GENE MEGF6 NULL multiple EGF-like-domains 6 EMBV3_06739 TGTTGGAGCCCACAGTTCTGCCAATTACTTGCTGTGTGATGGTGGGCGAGTTGCTTCCTT Gene GeneID:538276|LOC538276:XM_002688539:145_cdna Constitutive 0 NULL GeneID:538276 7 GENE LOC538276 NULL similar to Janus kinase 3 EMBV3_40858 TGTAAAGAGTCGGCCCCTATGGCACCACAACCTCCTGGTCTGCTCTGTGAATGGTTTCTA Gene GeneID:618722|LOC618722:NM_001083785:164_cdna Constitutive 0 NULL GeneID:618722 23 GENE LOC618722 NULL similar to MHC class II antigen EMBV3_12694 CTGTCTCCACCCATGTTAGAAGAAATGGCTTATTCTGCATATGTGCCCCAAGATGGGACG Gene GeneID:512385|LHX8:XM_002686301:181_cdna UTR3_Alt 2 NULL GeneID:512385 3 GENE LHX8 NULL LIM homeobox 8 EMBV3_40916 AACGCCTACGCCAGCATCGACTTCTTGACGCATCACCTGAAAGAGGCCACGGTGGTGAAA Gene GeneID:100300012|LOC100300012:XR_083818:3_cdna Constitutive 0 NULL GeneID:100300012 12 PSEUDO LOC100300012 NULL similar to insulin receptor substrate 1 EMBV3_05573 ACAGTAGCCAGTCTTATTGTGGAAGCCACGAATGCCCCTGCAAACATCCAAAATGCCCTC Gene BVT0102_125795 + 1 EMBV3_38589 GK000003.2:37436151-38166345 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176991 1 XLOC_106765 NonCoding TCONS_00176991 XLOC_106765 NonCoding NonCoding - 3:37904669-37906231 - TSS131750 1562 4 TCONS_00176991_4 76 0.411651728553137 1 0 0.000587953304319966 0.000764461631257682 0.000313008980026778 4.25308470388113e-05 0.0003977346279196 0.000151142962977388 2.61344159169111e-05 3.78662477187732e-05 0.000712233209532552 0 4.39665454101986e-06 0 3.67385667493633e-06 0 0 0 0 0 0.00110333881938218 0.000616934639758066 0.000413801083367899 0 0.000264296276376585 1.07328020268544e-05 0.000385901656762989 0.00115695409687016 0.000472633319288561 7.99406708504916e-05 8.39145033275642e-05 0 NM_001130765.1 SP140L Bos taurus SP140 nuclear body protein-like (SP140L), mRNA. 2e-126 457 94.26 0.188860435339309 0 noncoding 0 0 0 0 0.127796711693655 0.479095818982668 -0.00619606322398064 0.902287236727558 TCACAATATGATTTACTTTATTTAGCACATTGGATGTTTCCTTTTTCAGAAAGCAAATATATCACTAGCCTAATGTATATAATACAAAGAAAACTGAAGCAAATCTTACAAGCAAATGAAACTACCATAACAGATTATAGTCTAAGTCAACTCTATTCAACAGTGGTAGTACCACTACCTAGAGGGCATTTTGGATGTTTGCAGGGGCATTCGTGGCTTCCACAATAAGACTGGCTACTGTAACTCACTATTAAAGGGAGAGAACAGAGATGTTAGATTTGCTGTGTACTGTCCATTGTCAGTTAACATCCATTCCCATTCCCACTTTCTGTACCTCTCCCACTGTTGGCCCTCTCCCAGTATAGCAGGCATTGGAAAGATTAAATCTACAGATTTCCTTACAGATGAATTTGGATGTTTTAATTTAGATTAATCTAATGAAATAATCTTGCTACATATTTGGAAGGTAGACATAAAATGAATGCCATTTTCCTGTGCCTACTGCCATTTGCTGTGATTTAAGCAAGTTGTCATTTTCCTGCATCAGGTACTATTGTCTAAAGGTTTCTGTTAAGAAACAAGGAATGTAGTTCTGTTCCTCATATGACTCTCTGGGGTCTGCTGTGGCCCTGCTGTCGTTCACCAACCTAGGTGAGCATGGCTCCAGTGGCAGCCTTGGGAATAGGAACGCTATGATTGGAAATTATAAAATTTCCTAGGAAACATTTTGATAGGCCCAAGCTAGAACTTCAACTGTTCTGCAACCTTTCCCATAATTTTGTAAACTATTAATTCCCTATATTAAATTCCTTAATGTTTATAATACTCGGGGTAACTATAATTGCTTATCAGTGCCATGCGTGCATGCTCAGTCGCTCAGTCATGTCCACTCTTTGGGACCCCATGGATTACAGCCCACCAGGCTTCTCTGTCCATGGGATTTCTGTGGCAAGAACACTAGAGTGGGTTGCCATTTCCTTTTCCAGGGGATCTTCCTGACCCAGGGATAAAAACAAGTCTCTTGCATCTCTTATGCTGGCAGGCAAATTCTTTACCACACTTCCACCTAGGAAGCCCAATACTGAACCTTAATTCCTTCATATTACATATAGCAATGTTCATCATGGTTTATAGAATGAAGGATTCTTCTGTATTCCATGAGATATCTGGATAGTATCCAAGGCATTCATTTTACTTTTTAATATGTTTATATTTGATTCATCAGTTCAGTTCAGTTCAGTTGCTCAGTCATGTCCGATTCTTTGTGACCTCATGAATCACAGCAGGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTGAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTCCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAACCCTGGGGCTGATCTGAATCCCTAGAAAATAAAAATATAATACATATTGACATAAAGCAA TCONS_00173091 . 3' 1359638 TCONS_00173091 . 3' 1361199 EMBV3_40323 CAGGGAGTATATCTTCTGTGTGTTTTGAAGGAGGTGAGTTCTGTATGTGCCTTGCAGTAC Gene GeneID:534262|USP38:NM_001102167:41_cdna UTR3_Alt 2 NULL GeneID:534262 17 GENE USP38 MGC139596 ubiquitin specific peptidase 38 EMBV3_09584 AGAGCATCAGACTGTTACTTGAGGTGTCCAGAGCAATCCCTATTATTCTCATACAGATGA Gene GeneID:507292|COMMD8:XM_002688237:41_cdna Constitutive 2 NULL GeneID:507292 6 GENE COMMD8 NULL COMM domain containing 8 EMBV3_38737 CATCCTCTACGCCGGGAATGACAAGTGGTCCATAGACCCTCGAGTGATCATCCTGGTGAA Gene GeneID:100336791|LOC100336791:XM_002699229:48_cdna Constitutive 0 NULL GeneID:100336791 29 GENE LOC100336791 NULL opioid-binding protein/cell adhesion molecule-like EMBV3_24192 GGAGAAGCTTATCACAGTAACCAAGGCTGCGTTAAACTCAGTAACGATAGGGACTTCACC Gene BVV0102_071724 + 0 NULL GK000012.2:12405181-12459620 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038113 1 XLOC_021939 NonCoding TCONS_00038113 XLOC_021939 NonCoding NonCoding - 12:12411198-12411736 - TSS27614 538 1 TCONS_00038113_1 81 0.226765799256506 1 0 5.05788394985264e-05 0 0 6.17409348256196e-05 0 0 1.08396107270864e-05 1.09938995108343e-05 0 0 0 1.32925217978026e-05 1.06664649501521e-05 0 0 0.000687291761046229 0 0 0 0 0 0 3.4104200544604e-05 3.11610087253561e-05 0 0 0 0 9.02345889169778e-06 0 XM_005203874.1 TARS2 PREDICTED: Bos taurus threonyl-tRNA synthetase 2, mitochondrial (putative) (TARS2), transcript variant X2, mRNA. 7e-25 118 82.03 0.230483271375465 0 noncoding 0 0 0 0 -0.0770026032315563 0.618485715878299 0.000100839026040488 0.99880045686595 GAAAAAGCTATAAAGGTTTGTCATTACAGAGAACAGAGAGAGAAATGACAGCTGGGCTGTACCTATTTGTGTATTTCTTTCTGTTATTTTCAGGAGAAGCTTATCACAGTAACCAAGGCTGCGTTAAACTCAGTAACGATAGGGACTTCACCAAAGGTCCAGTGGTTAAGACTTGTGCTTCCAGTGCAGGGGGCACGGGTTCAATCCTTGGCCAGGGAACTAGGATCCTGCATGCTGCACAATGCAGCCAAAAGAAAAAAAAAAAAAAAAAACTCAGTAATGGTGTTTAGTAAAAACCCATATTACTAACATAGGTGAACAAGTTAATTCTTTTATGTAATTAAGATTCTATTTACATATATTTATATCTTCTCTCTTAATTTTGTATGCACTTCCAAGTTTTAGTTGGAAAAGTAGAAACCAAGCCACTACTTAAAAGTCATTTTAAAAAGCTCCACATAAAATATTTCATTTTAGCTACGAGTTACTCATTGTATAGGAATTTATGAATAGTCTGGATATTTCATAGAACTGCACT TCONS_00034513 TCONS_00034514 TCONS_00034515 TCONS_00034516 TCONS_00034517 TCONS_00034518 TCONS_00034519 TCONS_00034520 TCONS_00034521 TCONS_00034522 TCONS_00034523 . 3' 2467 TCONS_00034513 TCONS_00034514 TCONS_00034515 TCONS_00034516 TCONS_00034517 TCONS_00034518 TCONS_00034519 TCONS_00034520 TCONS_00034521 TCONS_00034522 TCONS_00034523 . 3' 3004 EMBV3_00203 GAGTGATCCTGCTGACTGCCAGCGAAGGTTTGTAATTAAGAAAGGACTGAACCACTGCCC Gene GeneID:504208|GPR85:XM_002686798:151_cdna Constitutive 0 NULL GeneID:504208 4 GENE GPR85 MGC142415 G protein-coupled receptor 85 EMBV3_27512 AGACCACGCAGGGCTTCATCGTGACCGCCTCTAGGGACGGCATTGTTAAGGTTTGGAAGT Gene GeneID:507414|PIK3R4:NM_001100314:3_cdna Constitutive 0 NULL GeneID:507414 1 GENE PIK3R4 NULL phosphoinositide-3-kinase, regulatory subunit 4 EMBV3_19173 ACAGTTCGCCGTGTTCTACAAAGGGGACGAGTGCCTGGGCAGCGGGAAGATCCTACGTCT Gene GeneID:616451|TRMU:NM_001163188:52_cdna Constitutive 2 NULL GeneID:616451 5 GENE TRMU MGC133954 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase EMBV3_04628 TGCCATCTATGGTTTGATGGTTGCCCTCTTGATTGGGGGCTTTGACATCCTGTGCATCAC Gene GeneID:504568|LOC504568:XM_002693195:368_cdna Constitutive 0 NULL GeneID:504568 15 GENE LOC504568 NULL similar to olfactory receptor Olr170 EMBV3_14550 ATCAATACTGGCCCTCCCCCTGCTGCCACCAAGACTGCGACTGACACCCAGAATTCAGAT Gene GeneID:784640|LOC784640:XM_002686413:361_cdna Constitutive 0 NULL GeneID:784640 3 GENE LOC784640 NULL similar to hCG1780502 EMBV3_37248 CCCTTACCGAGTGGAGGATATCACCTGCCAAAATTGTAAACAGACTAGATGCTCCTGCCC Gene GeneID:540150|ZAR1:NM_001076203:131_cdna Constitutive 0 NULL GeneID:540150 6 GENE ZAR1 NULL zygote arrest 1 EMBV3_23123 TCTTGGCTTTAGCACACTAAACAGTGGTGGGGGGCTGAAAATGGATGCAGCTTCTCAGAG Gene BVV0101_013161 + 0 NULL GK000003.2:104350045-104369928 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40644 GAACTTCAGTGGGGACCAGACTCTCTATGGGGGTCAGATGAAGACAGTCAATGATGACAC Gene GeneID:100337229|LOC100337229:XM_002686511:676_cdna Constitutive 0 NULL GeneID:100337229 3 GENE LOC100337229 NULL mCG120027-like EMBV3_17300 GTGAGACCACTTAGGGTAGCCCCAGGGCCTGTCTCTCCACGAGGGAATTTGATGAACATT Gene GeneID:511037|TMPRSS2:NM_001081585:15_cdna Constitutive 0 NULL GeneID:511037 1 GENE TMPRSS2 MGC154978 transmembrane protease, serine 2 EMBV3_06281 GTCCCCAGGAAGCTGGGACAAACACTGAAACTGGAGACTAACTGTACTTGAAACGACGAA Gene BVV0102_145436 + 1 EMBV3_43276 GK000021.2:59007721-59118851 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00124934 1 XLOC_076477 NonCoding TCONS_00124934 XLOC_076477 NonCoding NonCoding - 21:59063717-59065088 - TSS93693 1371 3 TCONS_00124934_1 62 0.450765864332604 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000616463208240225 0 0 0 0 0 0.000227329136630026 0.00366024598933607 4.89121036356079e-05 0 0 0 0 0 0.000306971244685307 XR_228014.1 LOC100848959 PREDICTED: Bos taurus uncharacterized LOC100848959 (LOC100848959), 2e-17 95.1 80.56 0.0780452224653538 0 noncoding TTTATCATATTGTTACTGAACCCAGGTCCGACTGCTCACCACTCGATAGCCAATTCTCGAGAGACAAGGGTTGGGAGGAAAGGGAAGGAAGCTTTAATTCAGATGCTGGCAACGGGGGGACAAGGTGGACTTGTGTCTGAGAGCCAACTCCCAGTTGCTGCTCGGGAGGCAGACATTTTTAAGGGGGCGTTTCAGGGTTATATGGACAGAGGGTGGGAGCAGGATGGCACAGTCAGCTTAGACAGTCATCTCGATATCGGTGATGATGGTCATAGTTGGCTCCTGCAGTGATCTCAATATTGGTGACGATGGTCACAGTCGGCTCCGATAGTCATCTTGATATCAGCGATGTGGCAGCCCATTCAGCATCATCTTCGTTGTTTCAAGTACTGTTAGTCTCCAGTTTCAGTGTTTGTCCCAGCTTCCTGGGGACAGTTCTTGGAAGTGGAGTGGCTTATGTCACAGCTTTTGTCTGGTCATCATGAGGTCATCTTCTCATCACATAGTCACCTTCTTCCACCTGGTGAGGGGGCTTCAGTATCTGAAAAACAGCTCACAGGATATGGCTCAAAATATTACCTATGACTCTTGAGAAGTAACCAGAGGTCCTTGGCTCTGCCTAGTGATTAGTGTGTTTGGCCTCATGTAAAGGCTTAGAGTGTGAGGCATAACTGAGTTCTAGGGTGAAGGCTGTGCTTACCATATGCTACCACTCCTTACGGAGGCTGTGTTCCAATAGTTCAGCCTATAGTCTAATACAAAACCCTGTGTACACCTGCCGGGGCAGTCAGCATCAGAGAACCCTGCAGTCCAAAGCCAGAGAGCTGGACCTTCTCACCATGCCCATCAAGTGTCCAAGAGACAAGCAGGGCCAGCCCAAGATGGCCGGAAAACAAGGGAGGAGGGAACACAGGCCAATCTATAACACAGGACGTGAAGCCAGTGCAGAAAATATCCAGGGTTCCTGGGGAGCACGGGAGACACTGGCCTCAGAGATGTAAGAGAAGAGAGGTCTAAACATCTCCCCAGGACTGCAAGGGGATCAGGCAGGCAGAGTGGTAAGTGGGAGCCATGGAAGGCATTTGAGCAGGAGAGAGCAGCCACGTGACGGTCATGAACCATCACCCCCTGCAGCAGCAGACTTCTTGGTACATCTTGCCTGGAGCATAAATTGAGACCAGTGGGGCTGTCGGGTACAAAGATCCACATAGATCAGCCGTGACGGGGACTTGTGTCCACAGAAATCCCTCAGGACTGCTCTCCATCAGAACAAGCACAGAGTCAAGGGATTAAAAGAGCCGATGGCCTGTTGGGCTGAGTGGGCATTAACACCCATGAAATAACAGTCTCTGAAGTCACCCAGTCCATCTC TCONS_00119891 . 5' 53764 TCONS_00119891 . 5' 53764 EMBV3_34421 CTTAAGCTTCTCTCCCAGTTCAATGTTTTCCTGGCGGAGTTTGACACTGTGTACATCATG Gene BVT0102_113548 - 1 EMBV3_31604 GK000009.2:11696165-11751986 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236609 TCONS_00236608 1 XLOC_144529 Coding TCONS_00236609 XLOC_144529 Coding Coding - 9:11718867-11719603 - TSS177091 268 1 TCONS_00236609_1 73 2 0.638095238095238 0 0 0 0 0 0 0 0 0 0.000199583568164788 0.000170834813588045 1.33420595628506e-05 0 0 0 0.0191544595421804 0.00308089038234013 0.0118234650573058 0 0 0 0.00236186799576661 0.00217757818953527 0.00173387759162238 0 0 0 0.000680963982481882 0.00036228429482426 0.000358939829313005 XM_865719.4 TXLNG PREDICTED: Bos taurus taxilin gamma (TXLNG), transcript variant 3, 1e-49 199 82.32 0.735074626865672 NM_001168683.1 TXLNG Homo sapiens taxilin gamma (TXLNG), transcript variant 2, mRNA. 1e-56 223 84.85 0.735074626865672 TCONS_00236609_1 sp|Q9NUQ3|TXLNG_HUMAN TXLNG_HUMAN Gamma-taxilin; 6e-24 95.5 90.32 0.835616438356164 1 noncoding GTTTTACACTATTAACAAAAATTATTTTGAACAATAAGGAAGAAAATATGCAGCAGGCAAGAGAAGAAGAAGAAAGACGTAAAGAAGCAACTGCACATTTCCAGTTTACTTTGAATGAAATACAGACACAACTGAAACAACATGATGTACACAGTGTCAAACTCCGCCAGGAAAACATTGAACTGGGAGAGAAACTTAAGAAGCTTATTGAACAGTATGCATTGAGGGAAGAGGAGAAGAAAATAGAACTATCACCCACTGTTGGCAC TCONS_00234690 TCONS_00234691 r 3' 31536 TCONS_00234690 TCONS_00234691 r 3' 31570 EMBV3_28612 GAGTGTGGGAGTTTGACAGCGACATCGTTTCCGTCGTGTTCATTGGACTCTGGGAAGCTT Gene GeneID:100140640|LOC100140640:XM_002691079:181_cdna Constitutive 0 NULL GeneID:100140640 10 GENE LOC100140640 NULL hypothetical protein LOC100140640 EMBV3_29894 ACAATCCAGGGGTCGGCTAGGCTGTGCATCTGCTTCTAGCAAGAGTCCTAATACAATGAG Gene GeneID:539200|RNF183:NM_001035422:47_cdna Constitutive 0 NULL GeneID:539200 8 GENE RNF183 MGC128943 ring finger protein 183 EMBV3_14968 CAGGAATTCAGTGCTCTGGGAAATAGGATTGAGAATGTCAAAAACCATTTCTGTTGATCA Gene GeneID:518158|ADPGK:NM_001082438:164_cdna Constitutive 2 NULL GeneID:518158 10 GENE ADPGK ADP-GK MGC148410 ADP-dependent glucokinase EMBV3_07482 GATGCCATATATTCCAACGTGATCAACCTGGCACCCAGGAAAGAGGATGACTTCGCTGTC Gene GeneID:515828|LOC515828:XM_002693868:130_cdna Constitutive 0 NULL GeneID:515828 16 GENE LOC515828 NULL hypothetical LOC515828 EMBV3_18075 TTGGCCTCCAAGGTCACCAGGCTCAAATCGGACTCAGATTTCACAAGTATGACGGGCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38985 GCACGGTGACAACGGTAGACGAGAGCCAGGTGGTGACGCGTTATGCCTATGTCCTCTTCT Gene GeneID:514587|USP19:XM_002697079:604_cdna Constitutive 1 NULL GeneID:514587 22 GENE USP19 NULL ubiquitin specific peptidase 19 EMBV3_14083 CTACCTCATACTTGCCCGACAAATTGCCCAAAGTGGAGGTGGATAGTTTTCTGGGGGAGC Gene GeneID:522566|PLAGL2:XM_002692287:1650_cdna Constitutive 0 NULL GeneID:522566 13 GENE PLAGL2 NULL pleiomorphic adenoma gene-like 2 EMBV3_10920 AACTTTTGGACATGGCCGTTCCTTTCAATAACGCTGAAGGAGTCTTCCCTGGTGGCTCAG Gene BVV0102_123341 + 0 NULL GK000030.2:107691830-107756810 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253306 1 XLOC_156247 NonCoding TCONS_00253306 XLOC_156247 NonCoding NonCoding - X:107746414-107748039 - TSS190527 1625 2 TCONS_00253306_4 92 0.542769230769231 1 0 0.00090425447747444 0.00102030225872763 0.00108200689382079 0.000383268392015388 0.000462576109756268 0.000270755687708321 0.000233268229805769 0.000203829681177667 0.000111675690886894 0 1.40872961485435e-06 0 1.76571298756822e-05 0.000182370204402263 9.66141551140977e-05 0 5.10840264966834e-06 0 0.00139447062606706 0.00183658068095808 0.000687431840920461 0 0 0 0.000605442389241059 0.00138091094418948 0.000890590296119341 0.000189147826945722 0 0 XR_228014.1 LOC100848959 PREDICTED: Bos taurus uncharacterized LOC100848959 (LOC100848959), 2e-62 244 73.52 0.256 0 noncoding GAGGGACACTGTTTGGTAAAGTAACCAAGCAGGACCCTATGGGGGCCTTCCCAGGACAGACACCTCCCCTGACCCATGTCCTCCACCTGCCTCTTGTCTGTAGGAAAACTTTAGCCTTCTAGCCCTTCCCTGGGTTCCAAAGAATGTAATCAGAGTTGTGAGAAAATGCAGAAAGACAACAGTCAAGCAGGACAAAATACTGATAGTTTAGCCCTTAAACAAAGTCAGGGACCTTTAGTTCCTCCTCAAAGGCTAGAGATAATATTCTGAGCCAAACCGTTTGAGCTGTTTTGCAGAGACCGAAACCCCCACCAGATGGAAGAAGTTAACTGTCTGCTGGCCACAAGCACATAGGCCCCAGACCAGGAGGAACCAGGTGGTTGATGATGTTGACTTTTGATTATCTCATCACCAATCCATCAGAAGAATGTCCACCAGCTGATCACATACCCAGCAACCCTCTCTCTCATCTTTAAAAACCTTCCTCTGAAAGCCGTCAGAGAGTTGGGTCTTTTGACCCTTAAGTACTGCCTAGGCTCCTCGCTGGAAGCCCTGAGACAGATGGTGCACTTTCTTTCCCTACAACCGGGTGTCAGTAGATGGGCTTTACTGTGCCAGAGAGTGGATCCAAGTTTGGTTCGGTAACCCTAAGGGTTAGGGGAAAACTTTTGGACATGGCCGTTCCCTTCAATAACGCTGAAGAAGTCTTCCCTGGTGGCTCAGTGGTAAAGAATCCTCCTGCCTAATGCAGGAAGCACTGGTTTGATCCCTGATCCAGGAAGATCCCACATGCTGCGGAGCAACAAAACCCATGCGCCGCAACTACTGAGCCTGTGCTGTAGAGCGCGGGAGCTGCAACTATTGAGCCCCAATATGCTAAAGCCCGTGCTCCACAGCAGAAGAAGCCACTGCAATGAGAAGCCCGCGTGGCAACAAAGACCCAGCACAGTCAAAAATAAAGAAAGAAAATTATATAAAATAATGCTGAAGAAACCTAGGCTTTCTTGGAGGTCATGTTTCCAGCCGTAATTGTTCTTGGACCTCAGACCCCAGTATGAAGGAGATATGGATGAATCAGCACCAGGCTGAGGATTTCAGTGTACTGATGGTGGGGCATAGGGAAAGGAAGGGGTGGAGAGCCACTGGCTCCCCCATGGGCCTCCAGAATCTTTTGCAGCCAGCCCTGCAAAAACAACTCCCTGCCCGCCCCCCTTCGCCCCTCCGCCCCAGGAAGGCTGGCAGGCCCACCCAGCTTCACCTGGTGGGAGGTTCACACAGGAGATTGTTATTCAGAGCTGGGTTTCACATCTTCTGGCATTCCATGCTAGCCTAGTTTTTAATAAAAACAACCCTATTTTGGTGCCTTAAACCTATTTTTCACCATCTGGCATACCCTTGTGCCTCTTATGTTTCTTCTTCTAGTACAGCCTGACAGGAAAAAACCAACAGTGGGACTAGAAGCTCTCCACCAAAGAGGATACATTGTTGTACATTCGAATGGATAAGGCACCTTTCTGTAAGTTGTAGCGGCTTAGTTCTGAGCAACAGACTTTCAAAAAAAAAAAAAAAATCCTCTTTCTACAGATGTCAATAGGACAAGATGAAAGAAGTTTACCTCATGAAAC TCONS_00247886 TCONS_00247887 TCONS_00247888 . 3' 26485 TCONS_00247886 TCONS_00247887 TCONS_00247888 . 3' 28109 EMBV3_36933 ATGCGGTCAGAAGACAGGAACAATCTGAGGCATGAAGTTAAGTAACTTGCACAAGCTTGC Gene GeneID:789977|LOC789977:NM_001103310:17_cdna UTR3_Alt 2 NULL GeneID:789977 8 GENE LOC789977 MGC157227 hypothetical LOC789977 EMBV3_16800 AATCCCTGGACGACGTCTTCACCAGAGTGTACAAAGCCAAATACCCGATCGTCGGCTACA Gene GeneID:616334|NENF:NM_001076419:123_cdna Constitutive 0 NULL GeneID:616334 16 GENE NENF MGC139431 neuron derived neurotrophic factor EMBV3_14984 CACCAGCGTCGCATCAAAGATGTGCTGGAATGGGTGAAGAAGGGCCGGAGCATCATCCTT Gene GeneID:507017|LOC507017:XM_002699580:58_cdna Constitutive 1 NULL GeneID:507017 X GENE LOC507017 NULL similar to UPF0472 protein C16orf72 EMBV3_13313 TCATTACCATGTTTGTGCCCCTAAGTCCAAATCTGACCTGCTTGGCTTTGAGCAGCGGTC Gene BVT0101_035073 + 0 NULL GK000030.2:125825972-125848354 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248231 TCONS_00248234 TCONS_00248232 TCONS_00248233 TCONS_00248230 1 XLOC_151547 Coding TCONS_00248231 XLOC_151547 Coding Coding PDK3 X:125838690-125930833 j TSS185706 11620 1 TCONS_00248231_2 324 0.149053356282272 11 0.874009680710208 0.000182888909435836 5.12546678634222e-05 0.000343881356092102 0.000258123099032588 1.04190605656977e-05 6.53820973785224e-05 0.000110405706233768 5.67401497044527e-05 0.000450939988412255 5.24827321378324e-05 6.24895835808789e-110 3.18321701462449e-05 8.49041061605305e-05 0.000103397136534116 2.82232695580391e-11 2.74952467859011e-05 1.76506392203134e-10 7.79842522481689e-70 0.000422750438214972 0.000721492666756686 0.000164279539117301 6.30968882467402e-05 0.000163219899960927 5.25166249660294e-06 0.000509881956704841 2.52821773598997e-05 0.000196210379752013 4.54733365325988e-15 1.08665968230038e-05 6.70238562541899e-05 XM_005228353.1 PDK3 PREDICTED: Bos taurus pyruvate dehydrogenase kinase, isozyme 3 (PDK3), transcript variant X1, mRNA. 0.0 3005 100.00 0.14328743545611 NM_001142386.2 PDK3 Homo sapiens pyruvate dehydrogenase kinase, isozyme 3 (PDK3), 0.0 2039 83.32 0.167211703958692 TCONS_00248231_2 sp|Q15120|PDK3_HUMAN PDK3_HUMAN [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial; 0.0 656 98.13 0.987654320987654 2 coding 0 0 0 0 0.540065701261509 0.23881751519625 -0.009979760204466 0.828619978843602 GGGCAACCGGCCGCGGCTCGGAGCTGCTGTGCTGCTGGTGCTGCGGAGGCTGCACCAGCGGCGCGGAGGCGGAGGCGGAGGCCGGGGTGCGCGCTTGGCGAACGTGCCCAATCCGCGCGGCTCAGCTGCACCGGTCCTTGCGGCCGCCTGAGCGTCTCGGCCGGTCTCTGCGCTGCCGGGGCGAGGATGCGGCTGTTCCGGTTGCTGCTGAAGCAGCCGGTGCCCAAGCAGATTGAGCGCTACTCGCGCTTCTCGCCGTCGCCGCTCTCCATCAAGCAGTTCCTGGACTTCGGTATATGCAGAGTTTTCTTGAACTTCTAGAATATGAAAATAAGAGCCCTGAAGATCCGCAGGTCTTGGATAACTTTCTCCAAGTCCTAATTAAAGTCAGAAATAGACACAATGATGTGGTTCCTACAATGGCCCAAGGAGTGATCGAGTACAAGGAGAAGTTTGGGTTTGATCCATTCATTAGCAGTAACATCCAGTATTTTCTGGACCGATTTTATACCAACCGCATCTCTTTCCGCATGCTTATTAACCAGCACACACTTCTGTTTGGCGGTGACACCAATCCTGTGCATCCGAAACACATCGGAAGTATTGATCCCACCTGCAACGTTGCTGATGTTGTGAAAGATGCGTATGAAACCGCCAAGATGCTTTGTGAACAGTATTATCTGGTAGCTCCAGAGCTGGAAGTTGAAGAATTCAATGCCAAAGCTCCAAACAAACCTATTCAGGTAGTTTATGTGCCCTCACACCTCTTTCACATGCTCTTTGAGTTGTTCAAGAACTCAATGAGAGCAACAGTTGAACTATATGAAGATAGAAAAGAGGGCTACCCAGCTGTTAAAACCCTGGTTACTCTGGGTAAAGAAGACTTATCCATTAAGATAAGTGACCTAGGTGGTGGGGTTCCACTCCGAAAAATAGATCGCCTTTTTAACTACATGTATTCAACTGCTCCGAGACCTAGCCTGGAGCCTACCCGAGCTGCCCCATTGGCTGGATTTGGTTATGGCTTGCCAATTTCTCGTCTGTATGCTAGATATTTTCAAGGAGATCTAAAGCTCTATTCTATGGAAGGCGTGGGTACTGATGCTGTCATTTATTTAAAGGCCCTTTCAAGTGAATCATTTGAGAGACTTCCGGTTTTTAACAAGTCCGCATGGCGCCATTACAAGAGCACAGCTGAAGCTGACGATTGGAGCAATCCCAGCAGTGAGCCCAGGGACGCTTCCAAATACAAGGGACAAGATGAAGACTAACAGAACTTTGTAAAGAACTGAATGCTTCAGTCCTCTCCGTGAAGAAAAGATGGCCTTCTGCAAGTCACCCAGAAAGAGCTCCTTTCCTCCACCAACTCTGAATGTGGCGCTATAGATAATCCAGTGCTTGAATGTGTATTTTTCTCCATATAAGCTGGACCTTTTCCACAGAAGTTTCCTGTAGCTACTTCATATCTTCCACTAAAGCAGTAACTTGAGTCATTTTTCATAGTACATTGCTGTGGTTTGGTTGGCGCCTGTCGTAAGGGGACACAGAGCCTTATTAGTGCCCGTGCCCTCATACCTCCGTCTTCTTTATCATAGACTATCTACAGTCTCCCCAGATGTCTTGCCTCCCTCCCCATTCCAGATACAGCCGATCTCTACTGCTGCTCTTTGTGACCAAATACCATGTTTGTCCCAAACCACCAACTGTGGCCTTGGGGAGTCTGGAATTTGAAGACATCAGATGAGCACGTCTTGATATTTCGGTCCCAGAGCCCTTCCTCTCTCTTATGCATCCCTCTTCACTCTCTGCTTTGGACTCTGGCCTTCTTCCATCTGACCAGATTCTCATTGTGAGCTGTAGATACTCTCATGTTAGATCTCCCTCTTGGGTGCATTGATTTCATTTTGAAATTCATTTGTATACTTCCATTCTGTTGATTAAAGTGTTCCAAAAGTTGTCTTGGGATTTTTCACTTAGCTGCTTGGTTTCAAAAATCTTAAGTGAAAAACTACCTTCAAGTCATTATCAAGTTTGTGAAGAGTGGGAAGTGAAGTTTTTATGCTCATGTAACAATTTACCAGTGAATATGGTCCTTTTGTCACGTCATATTCCTTTGCAGTTTTCTAAGTCCCTGTGGTGATGCACTCTACTAGGTGTGAAATAGGCCATCAAAGGGAAGAGTTCTTTCTGGTTTATTTGGAACATGCCCCAGGTCGTCATCGTTTATATTTTCATAACATTCAGCCTGCTTTAGAATCGTCGTGTCATGTTTACCCTTAGAAACACAAGCCATCTGAGAGTCTGGATTTAAAACCCTCAACTTAAACAGCTCTGCAGGGTGTGTTTCTCTTCACTAATATTTTTCATATATTTATCATCTACTTTGACTTCTGCCCTCTTTTAACATCCATATAAATGTTTCTCCATCTAGTGTTGAAGTGTTGAGTCCACTGATTTAAAAGCTGTCACTGGTAAAGTATTCCTCCTCCTCTAGACATATGACAGTACTAACCCTCTTTTCGCCGCTGCCATCTCAATGGGCTTTTCCCTGGATGGAGCCGTATTCTGACCCACTGCACTCGCATGGAGGACGACTCTGTTTCTCTTTGTTCCACCAAAGCTAATACTCTTTCATTACATTACCTGAGCTCATGGTGATTCCTTTGTCTTTCGGAAGACCTCATCTCTTCCATCCTTAGAAGACTCTCATCAGGGAACTCATAATCTAGTCTGGTAAGAAAAAGACCAACATTACTTCCAAGATACAAGTAATGAGATGGTCTGCATAAAGGCCTGTTTTTTGAAGGTCGAGTCAGTGTCTTGGGAATGGGGCTGTTCCATGTGATTATTTCCATGTGATATAAAGACGTAAAAAAAATGGCCTTCGAGTTTAAAGACCCCAGCTTTCCTATAAATGTCAGCTCGTCTCTCAGCCTCTTCCTTGGCCTCCCTTTCCAGCCACAGCCCTTTACACGTCTATGCATGATACACTGGAGGGGATCACATTCCTCTCTTTTTAGGTCTTTCTTGAAACTGAAGATGTCTTTCAGTGTTTTAATGACTTCATTGATAGTCCTTTGCTGATGTACGTTCTGGCTTAACTGTCTGACTCCAGGACAGTCTTGCCTCTCCTGTCTTTGTTTTCTTTTTCTTTTTTAAATTGTGTCTTTGTTTTCTGAATTAAGAAATTAACTTTGCTTCCAAAGCAATCATAAGAAGAGTTTCAGGAACATCTTTCATTCACACAGTTCGGCCACCCCAAGTATTCATTTCTCCTTTCTGTTTGCTGTGCTTTGTCTCTAGGTATCTTATCATCTTTCTACATGTTATAATATACATAGACATTAACCGTTTTTCAGCTAAATTTGTTTAGTTCTCCCAATTCCCCTGTACTTCCCTGTCATTTCCTCAATTTCAAGCATCTACTTTTTGAAGCAGGGGCTGGCACATAGTAGGTGCTTAATGAATATTAGCTGAGTCAGTGAATGGAAGTGGACAGACATTTACCTCGGATGGTGGGCAGCATCTTTCTTCTTAAACTATCTTTGTTTTCAAATTTAAAATAATTCTGTTCAGGAGCTGTGAAAGTACAGAACTTCCTTTTTATAAAAGTGTTAAGAGATGACTTGAAAATGGAGAGACATGAAAGGATGGACTTAGGGATGGATTCACGGGAGCCATCTGATCCTTTCTTTGTCTCTGAATGACTGATTTTGACTCCTTAATATAGTAAGTTCTTTCCATCCAGTCGGACTTCCCTGGTGGCTCAGATGGTTAAGCGTCTGTCTACAATGCGGGAGACCTGGGTTTGATCCCTGGGTCGGGAAGACCCCCTGGAGAAGGAAATGGCAATCCACTCCAGTACTATTACCTGGAAAATCCCATGGACAGAGGAACCTGGTAGGCTACAGTCCATTGGGTCGCAAAGAGTCGGACACGACTGAGCGACTTCACTTTCCATCCAATCAGGTAACATGGTTTTATACCCTTGCTTACACATTCCAAAGAACTTTCACGTACATCATCCCGTTTGATCCTTTCGCTGCTGTGTGCTGAACCATGCAGGTATTATCTCAGTTTTTCATATAAGTTCCAAAGCAGTTCAGTGGATCGTCACAGTGGCAGGGAAGAACAAAAGCTAGCAGCTGGGTCTTCTTGGCCCTCGGCCTGTGCTCTCAGCACTGCCCCAGGTAATTAGCATGATCTCTTTTGAGAAATTTCCTGAGTATATTAACCCTCAAGGGTAAGACAGAAACCAAAAATTTTCTTTAGTGTCAGAGAATTTCATTTGGGAGAGGTTCTCTTTGGTGCATTGTCATTTTGCAGAGTTAGAGATCATCGAATGGATTTGGCAGCTTTTACCTAGAAAGATAGGCAACTTGAAAGTATCTAACTGTAGGTAATTACTGGAGTTATTTAGGCTTAATTCTGTGTTTGAATGAAGTCAGTGCTTATTGCCAGCCCTCTCATACAAAGACTCCACACTTGAGAGTCGTTGCTTTTATCTTTCAGTGGACGGGATTACAGCTTCCGTTGAGTGTTCTCACATCATTTCAGATGGCGTCTTTTATGAACAGTAACTTGGCTGGCTATCAGATTCTTGGATCACGTCTTTTTTTCCCTCGGTTCTTTAGAGACATCACTCTATTGTCTTCTAGTGTCTGGTGGTTCAGAGAGAGCTGAGTCCAAACGGATTTTTGTTCCTTTTTTGTAGATGATCTGCTCATTGGCCCTAGTACTTGTGATTTCATGTTTGTCCTTGACATGCAGTAACTTCAGTCGAGTGTATCTTGGAGCCAAGTTATCTGTTGGCTTTTTCTGGTATGCAGTGAGCATCAGACATTGACACTCGTGCCTTCCCTCACTTCTTACCCTTTGTTGGTTCTCTTTGTTCAGCAGTTTGCCCCTATATTGGCTCTCTGTTCTCTGTCCTCCACGTTTATCTTGCCTTTGATCATTTTGGTCTCCTTGTCTTTTCTTCCTGCTGTGTGATGTTTTTCCTCCAATCTTAACCTCCCATTTCACTGACTCCATTTCCTGTGATGTTGATTCTAGGCCTCGATTTGGCCTCCGTGTGGCTTTCACTTTGGCTACAGTTTTATCTTTTTTCTCTGTGTCTTTTGCTTAGCTCTGCCAGCTTTTTCTCTCATTGTGTTGTCCTCTTTGACCCTTAATTTCATTTCTTGGAAAGCTGACCTATGTGGTCTACCATTTTTGTGGTTTCTGAGATCATTCTTTTTTCCAGAGTGTGTGTATCTATCTTTTGCTTCTTTCATTCCTTTTCTTCTGTGTCGTTTTGCTTTTTTATTGTTGCACAAGTATCGCAATAGCTTTTTCTGCTTATTATTTTGGTCTTTGCATGGGACCAATTCTGTCTGCCAAAAAGAGTATGAGTAAGTTGTCCTTGAACTCCTCCTTTTTCAAGTGAAACACGTTTGATCACCTGAGCCCTGAAATTGGCAGGCTGGATGCTGATGGTGTGTGGGGGCAGAGGCGGTCTTTGTTTTCCATTCTGCTCTCTGGACGCGGGGGAAGGAGCGGGGAAGCAAAGCCTCCCGGAGTGCCTTCATGGACACTGTTGAATGCTCTGCCCTTGGGCTGAGCATTCAACATTCCCCTCGAGTCTCCCTGTCTCCACTAGAGGTCGCCCCCTCGAGTTCAGAGGGTCTGCGCCTGTAGTCAGCGTTTGTGTGTTTAGCTCCTGCGTTACTGTTGGTCTGCTCTTCACACAGATGGGGCACATGAGATGTCAACCTCCCCTCCTAGGTTTGCTTGGGGGAAATGCGCCCTCAGCTTGTCCTGACCACCACCAGGCTTTGTTTCTCCAAGTTGAGGGATAATTGGTCAAGTCCCTTGAAACCCTCTCAGCGACTGCCCAGCAACTGTGGACTGCTTGACAGATTGAAGAAGCCTTCTCTGATGAGTCCTAGCTTAGTTATCAGATGCTTCCCTGGAGTCCTTGGTATGGCGTGGTGGCTTTTATTAGTTTCCCCGTAGACAGCTTCCTTTTCAGCTTTTGGATGTGTGTGTTGAAGGGCAGGAGCACGTATATAAACATGGACTTACTCTGCCATCTTCCCAGCAGTCCAGGTGCTTAAACATTGACTTTGACGATAATGTCCTTCCCAACCATAAGCTATATGTTAGTCAGCAGATGGAAGCCATGCTGCTAGCTAGGAAGGGACCATTAATAACTTCATCAATACCGGATGTTTGTTTATTCTTTGTAAAAAGATAGCTTTTACCTTGAGTTCCTGGTCCATCATTTAGAGAGATCAGTACCTTCTGGCTTGAAAACAAGAGGGCAGATGACGTTTTAATGAACTTCAAAAGTGACTAGCCATTGACAGATGTATTAGTTCATTAAATATGATAGAATATTTCAAACTAGCAGATAATCAGTTGTTATCAAGAGAAGTTTAAACTGTTTTTGTTTTTTTTACTAACAGGTTGCTAGTCAAACTGCGTGACTGAGAGAGGTGTTCCTATGAGAGCTTTTACTGTGACACAGGTTGTCTTGTCTTTTCAGCAACCCATCTCAAAATGTGATTCATTAAGAAATAGAAAGGCATTAAGTCCTCATCAGGATGGTTGCTGATATTCACAAGTGTACAGTGAGATGGTTCGTAGGCCTGGGACCTACTGTCACACAAATTGGTGTTTCGAAAGTGCATTTACAGGGTGATCACAGGTGGAGTGTTTTATTTGGCCTGTTTGTAGAATTGAAGCCGCCTTCCCTCAGCGGACTGCGTATCCCACTAGGCACACTTTCCTCCTTCAGCCAAGCAGACGATCCACAAGCAGGGGTTAACAGTCTTGCTCAGTGTGTCTGACTCTGCCCTGGCCACCGCCTTCCCCTCAATTCAGGGACTCAGCTCTGGTTCCCTCTTGGTGTGAAGCGCGGCATGGATCATGTGTCCACATGTGAGGGACGAAGGAAGTGAAGGGAGTGGAAAGAGGATTCATGGAAAGGAAAGCTGTGTTCCTTCCTCCCTTTAAATAGCTAGTGTCTCCCATGCACTTGAAATGCCCAGTGCTGGGCACACACTGTGGCGACAGCAGGCTGAGTCCCAGCCTCTCAAGTCCACATTCAGGTGGGCGAGTCAGACGAGACCCTCACCAGGGAGAGTTTCTAGTAGAGTTGGGAGAAAAGGGCGGGAAGGGGCCGGCAAGGGCCAGGTGAGGGGGGAGGACACAAAACCCTGCAAGCATTTCCATCCTCACGGATGGTATGGTTGTGTGTGTTCAACGAGGTGGCATCGGTGGGCCCTGACACCCTGTCTCCTGTGTGTGTTCCTCTGCATCTGGAGAGGCCGTGTTCCCAGCCTGGCTCTGCTGCCTTGCGTCCAGGCTGAGCCCGTTGGCGTTTCCTTGTCTCGCTGGCCATTGGGGAATGGTGGGCGCATGAGCCAGGTTCGATCATCACATTGCACTGATGGTGTGGGCCGCTGTCTTCTCACAACGGAAATGCAGGCCAAGCCACACCCCATATGGGTTTTTGCAGAACTTCAGAACTCATGACCGAAACCAGATCCTCCCACTTCTAAGCCTCTGGAGGGTGATGCCGCTTGTCAAGAGGAAAGACTGTCTAGAACACTGGCAAACTGGTCTGAGAGGTGGGGGAGAGGGTTAGCCGAGGAGGCTTTCCTCTCAAGTCTGCAAATTGGCCTCCGTGGTGTTCAACCCGTGCCCCCCACCCACCCCCCAAATGAAGAAAATAAAAGGACAGCAATATCGAGGTCCTGGAATCCTTGAGAAACCTTTGTTTATGCCTTTTCATGTATCTCTAAAACCTGGACTTGAATTGCCCAGGATGCCGGTGATGGGTCAGTGGAGCTGGGGCGCAAGTAGCTACTTGGGGCGGGAGTGGGGGCTCTCGGTAGAGATCCTGCTCCCTCAGAGCTGAGGAGGACACTCAGGAGGTCTTCTGACAACCTACCCGGCTGGTTTCTAGGGAGGGTAGCTAGGCGTGCGTTTGCATATAAATGAAAGCACCTTAGGGCATCACTACTGAAAGCCTTCGAAAGTGGGATACAGTTAAGTGCCTGTATTAAAAGAAAGCCCAGCTCTTATCTCACATTAAGACTCTGCAGCATTTAATAAACGCATATTAGTGTTTGACAACTCCTCGTCTCTATTCTTTTCCCTCCAGCACTGCTGTCTCCACAGGGGTGGCTCGCTTCCCAATTTGAAGTGGTGCCTTAAGTCTTTGGTGGAGTCTGCACATCTCTGGAAAAGGATAAGCAGTAGAGTTTGATGTCTGGAGTCCTGTGGTCTAGTTATTTTTGGTGGGATTTTTTTTTTTTTTTTTTTGGGGTGGGATTTTTAAAAAAATGTTAGAGAACTGAGTCGCAGGTTTGTGGTAATAGTGGATCCAGGAAGCTTGCAGTGAAAAAGAGGATGAGTTTAACCTGTAAAATATTTCTCTATTCTATAAATCTCTCAGTGACATTTGGATTAATCAAGCATAATTAAATGTAGTTAGATTTTTGTCAGATTGTAGTTCAAAATAATATTCATCTATGAAGAGGGTAATATATTCTGTAGAAATTTTATTAGGCACTTTAGTTAAGCAAACACTAAGAACAAAATCAGCCTCAGGAAGGTTAATTACCAAAAAAAAAAGTATAGTAGATTATATAAATCATTTTAATTTTGAATACCATGGCTGAAGCTTTAATTTACATAGAGAAGTATTTTGGATTTGTTTTTCACATCACATTTTTCAAAAGTACAAAATTGCGATTGCATTCTTTAAAAGTTCTCATCATTTGAGGATTCCATTAAGTCTGCTTAACTTTTTCATGTTATAGTTTCCAAAAGTGATGAATTATAGTTGCATTCTTTAATATGCCAACTAATTTTAACAATTGCTTTAAAGGGGGAGAGAGAGAGATCCAATTGATTTTAGAAGGTTTTTTTGTGTGTGTGTGTGTGCTCAGAATTACATTTTCACTACCCTTGCCTGTCTCAGGGAATAGCCTTTGATAAGATTCCTCATGGATATCTCTGGAAGTCTATCCTGGTGTGCTCAGATTTGATCATTCTCGTCTAAACTTCTAAAGTTTGAAACGTGTTGTCATCTCAGGAACACAAGGTTACCCAAGAAACTTGAACTCCATCCTTATCGGCACTCAGATTCGATGTGCTTTTTCATAATAAAAGGACACCTAAAAGTCCTTTGTGTAATAGGTATAAAGACCTCCTTATCACTCTTCTCTGAGATTTTCATAGAAGAACCCTGCATTTTGATTTTGTTTGATCATTTTGCTTCTTGACTTTTCACTGAAGATTCTGTTTCCCACTGGAATTGAATCCTTTTGGGATAACAAAATTTCACTTAAAAGCACATTCTGTTAGATAATTCTAACTTTTGACAACCTCCAAGTGGCCTGCTAATTTTTGCAAATGGGCCAAAGCAGCACAAATGTCAAAGATATAAGCTCTGTGTTTGCCTTGTAGTTAGCCAAGTAAAGAAATGTCTAATCCTAGCACTTAGAAGTGGCTTAATGGCTTTCGGTTTATCTCTGCATTCCAAATTGGTTGAAAATGGCACATTCAGAATGGAATGCTTATTAATAACAGAACTACTTAATGTTTTAAAATAGTCTTACCTTGAGATTCTTTTTGAGAAAAAAATGACTCTTAACATTCAGTTCTGTTTTGGCTCTTCATACATGCCATGATCGGAAGTCACAGACATTTGCCGTTTAGCCATGCTTAATGTACAAGGACAGTGATGAAGAGTTGGCAAAAACAGGCAGAATGGGTATAAAATGTTACATTGCTGCTGAGAATGCATCATGGCACCGCTTTCTTCTAAATTCCATTTTCTTTTGCCCTTTGAACCTTTATATCCATGAGAAACCTCAGTCAGTATTTTTAAAGACATTATATTTACATTAAGAATTGGCCTGTGCCTTTACCTAAAACTTCCTTTACCTAGGACTTCCCTGGTGGCTCAGACGGTAAAGTGTCTGCCTACAATGCAGGAAACCCGGGTTCAATCCCTGGGTCAGGAAGATGATCTGGAGAAGGAAGTGGCAACCCACTCCAGTATTCTTGCCTGGAAAATCCCATGGACAGAGGAACCTGGTAGGCTACAGTCCATGGACAGAGGAACGTGGTAGGCTACAGTCCGTGGGGTCCCAAAGAGTTGGACACAACTGAGTGACTTCACTTTCACTTTTACCTAAAACACTGCTGAGGTCACTGTCTGCCATGTTTAATTAGGACAAATGTTTTAGAGTCATTACAACTGAAGCCTGTAGGGATCTGAAAACACGGGACCACCTGCCACTGCCAAGGAACCAGGCTGGGTGGCAGGCTTTGCAGCCTGGTGTGTGCCGACGGCTGTCACAACCAGTATAAAACCTAAAATAGATGCTAGCCACGATCCCGTATCTGCTCCCTTCTTCTCTACCTGCCTTTGTAACTCTTGGGGAAAATGTATGTCAAGTCCTTTGATGCCTTGCTCTTTTAAATTCCTGTTCGTGCTGGCATGTGAATTTGACCAATAAGTTGTGCATGTGCTTAAGATTCTTTTTTTTATTTTTTTAAGATTCTTTTTTAAACTAGACCAAACTAAGTACTTGGCTCTGAGTAAACAGCCAAGGCAAGGTTTACCTAGAAGGTGTAAAGGTTTAAGCACTTTAAAAATGCAAGTTGGCTGTATTCAGGGTCGGAGGAATCCAGTTCGGTGGCCTCTGTTTCTGTTGTCACTGTTGTTACTCTGTCCTCCCCGCGTGGCACTGGAATCAAAGGCCCCACTCTGCTGAAACGCCTAGGCTGCTCAAGTCAGTACCGGACAGCATGACACACGTTTTAGGAGAGTGAACCCTACCCCATTAGCATCCTGGCTGACCCCAATCTCTGCAGGGTTCCTTGGTGTTAAAGTCATCTGAGGTTGTGATTCCTGCTTCGGGTTTATATACTCATCATGCCATCTGTTGCTCTAAGTTCACATCCTTACAAAAGTAGATGAGTGCTTGTAATGTCAATATTTCCCAGATTTAGAATACAAGTTATGAATACTCACGAAGTGCTTGAACCGAAAAAGAAAAGTCAATGTGAAGTAGAATATACTATTGTGAACAAATTTAATGTTGCATTGAAATGTAAAGTCACTTGGCTGATTTTTTTTTTAATCATCACTGCTTAACTCATGAACAATGTCTAAACTGAGAACGTGAGCTGATTTAACAAGAGAAGAATAATGTATATATAAAATGAAAGTTCATTACCATGTTTGTGCCCCTAAGTCCAAATCTGACCTGCTTGGCTTTGAGCAGCGGTCAGTTTAGTTGCAGAGAAATGTACGTGTGTTTCTAGGGTTCACAAGCTGCCTCGTGGTTTGTAGAGGGAAGCCCGGCCCCCTGTGTTCTGTGCTGTTCTGTGGCCTGGCTGGTACACACTGTCACGAGTGAAGAATGACTTTGGTTTGAGGTTTTGTTTTTGTGATGGTTGGAAAAACATGACTGGGGAAGTGTGTGGCTCAGATAATGGCCCCCATCAGTCGGGGAGCCATCTGTGGTGTGTGTCATAGCCAGACGAGTCCTGGAGCATGTGGGCAGTCCTGTACACAGTCATTGAACAATAAAGTGGTGGTTGTGTCTCCCTG EMBV3_37688 ATCAAGAAGACGCTGCCTGAGCTGTATGCCTTCACCATCTGCCTGTGGTTGCGGTCCAGT Gene GeneID:100336779|LOC100336779:XM_002698218:801_cdna Constitutive 0 NULL GeneID:100336779 25 GENE LOC100336779 NULL neuronal pentraxin 2-like EMBV3_06192 TCCTCAGCTTCCTGCTTCCTGCCGGCTGGGTCCTGTACCACCTGGATAACTACAAGAAGA Gene GeneID:615757|COX8B:NM_001114517:5_cdna Constitutive 0 NULL GeneID:615757 11 GENE COX8B NULL cytochrome c oxidase subunit VIII-H (heart/muscle) EMBV3_25323 TGGTTGCCCTTCCTCCCCAGGTGATGTAGTAAATTTAGACTATAGCTCAACTGTTATTAG Gene GeneID:789054|SESTD1:XM_002685274:100_cdna Constitutive 0 NULL GeneID:789054 2 GENE SESTD1 NULL SEC14 and spectrin domains 1 EMBV3_33480 GAGAGTAAGGGAGAAGATGAATGGGAATTTCACTTTACACGGCTTAGGACAACATGACTC Gene BVT0102_144117 + 0 NULL GK000028.2:25399770-25404675 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159308 TCONS_00159309 TCONS_00159306 TCONS_00159307 TCONS_00159310 1 XLOC_097387 Coding TCONS_00159306 XLOC_097387 Coding Coding DDX21 28:25376201-25401457 = TSS119405 5109 1 TCONS_00159306_2 784 0.0692894891368174 15 0.798297366858048 0.000602667679395651 8.99853032759348e-05 2.08637992998498e-05 3.91634255779963e-07 1.6556836234922e-06 0.000243917076335286 2.25374388228729e-05 0.000157681650143166 0.00235128348910156 5.58000066981844e-07 2.7700122189389e-12 0.000489093175545657 5.3778377060512e-08 0.00317773433614224 0.000216949693050643 0.0178689207126941 0.0124635419323096 0.00416824671371643 0.00319706610222369 0.00244092513744418 8.10407894536444e-08 0.0117697020286895 0.00317842178852021 0.0114540370381392 0.00127051117821998 0.00126694956208037 1.81508821186853e-08 1.74646925607257e-05 2.52996086078075e-07 0.00060942021690668 NM_001083527.1 DDX21 Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (DDX21), mRNA. 0.0 5887 100.00 0.638676844783715 NM_004728.3 DDX21 Homo sapiens DEAD (Asp-Glu-Ala-Asp) box helicase 21 (DDX21), 0.0 3463 87.37 0.551379917792132 TCONS_00159306_2 sp|Q9NR30|DDX21_HUMAN DDX21_HUMAN Nucleolar RNA helicase 2; 0.0 1298 88.92 0.998724489795918 4 coding 0 0 0 0 0.0530800552938022 0.748865525537828 -0.0221109786847311 0.702486148048268 GTCCTCCGGATGTGAAAAGTAGTTACTTTGGTACTACCACCGACGCCCTCGCCTGCCGGTATCTTCCGCTTCCGCTTTACTACAGGAAGTGACGAAAGCTGGGTGGGCTGTAGGGGCAGCGTTTTCTCTTCCTCTCCACGCGGTAGACGAGACTGGTCGGCCTACATAGCTTGTGCTGAGTGATGCCGGGGAAACTTCTTAGTGACGCGGTTTTGGAGTCAGACGCAGCCGTGGCAAAAGTGGAGATGCCGCGAAAACAAAATGAGAAGAAAGGTAAAAAAGAGAAGCCAAAATCTAGTAAGACTGAAGAGGCAGCAGAAGAAAAAGAAGAAATGATTTCTTCCAAAGCTAAAAAGGTTACAAAGAAAGTAGAGACTTCTGAGGTTGACGTGAATTCTCCTAAATCTAAAAAGGCAAAAAAGAAAGAGGAGCCATCTCAAGATGACATTATTTCTCCTAAAACCAAAAGTTTGAAAAAATCGAAGGAGCCCTGTGAAAAGACAGTTGTTTCTCCTAAAACCAAAAAAGCTATAAAAAATGAAGAGCCTTCTGAGGAAGAATTGGGTGCACCTAAGCCCAAAAAGATGAAGAAAGAAAAAGAAATAAATGGAGAAATTCAAGAGAAAAGCCCCAACCTCAAGAATGGATTCCCTGACTCTGGACCTGACTCCAACTCCAAGGAAGCTGCCAGTGAAGAAAACAGTGAGTTAGAGCAGGAAATGACTGTGGAGCAAAAAGAAGGCGCTTTCTCTAATTTTCCCATATCTGAAGAAACTATTAAACTTCTTAAAGCCCGTGGGGTGACCTTCCTGTTTCCTATACAAGCAAAGACTTTTCACCATGTCTATAGTGGGAAGGATTTGATTGCACAGGCGCGGACAGGAACTGGAAAGACATTCTCCTTTGCTATCCCTTTGGTTGAGAAACTTCTTGGAGAACTGCAAGACCGGAAGAGAGGGCGTGCCCCTCAGGTACTGGTTCTTGCACCCACAAGGGAGTTGGCAAGTCAAGTAAGCAGAGACTTCAGTGACATCACAAAAAAGCTGGCAGTGGCTTGTTTTTATGGAGGAACTCCCTATGGAGGACAAATTGAACGCATGAAGAATGGGATTGATATCCTGGTTGGGACACCAGGTCGTATCAAAGACCACCTGCAGAATGGCAAGCTAGATCTCACCAAACTTAAGCATGTTGTCCTGGATGAAGTTGACCAGATGTTGGATATGGGCTTTGCTGATCAAGTGGAAGAGATTTTATGTGTAGCATACAAGAAAGATTCAGAAGACAATCCCCAAACATTGCTTTTTTCTGCAACTTGCCCCTATTGGGTGTTTAATGTTGCTAAGAAATACATGAAATCTACGTATGAACAAGTGGACCTGATTGGTAAAAAGACACAGAAAACAGCAATAACTGTAGAGCATCTGGCTATCAAGTGCCACTGGACTCAGAGGGCAGCAGTTATCGGAGACGTGATCCGAGTGTACAGTGGTTTTCAAGGGCGCACTATCATATTTTGTGAAACAAAGAAAGAAGCCCAGGAGTTGTCACAGAATGTGGCTGTAAGACAGGATGCCCAGTCCTTACATGGAGACATTCCACAGAAGCAAAGGGAAATCACCCTGAAAGGTTTTAGAAATGGTGATTTTGGAGTTTTGGTTGCAACCAATGTTGCTGCACGTGGGCTAGACATCCCCGAGGTTGATCTGGTTGTTCAGAGTTCTCCACCAAAGGATGTTGAATCCTACATTCATCGTTCCGGGCGAACAGGTAGAGCTGGGAGAACTGGGGTTTGCATCTGCTTTTACCAGCACAAAGAAGAATATCAGTTAGCCCAAGTGGAACAAAAAGCGGGAATTAAATTTAAACGAATAGGTGTTCCTTCTCCAACAGAGATAATAAAAGCTTCTAGCAAAGATGCCATCAGGCTCTTGGACTCTGTGCCTCCCACTGCGATTGGTCACTTCAAGCAATCAGCCGAGAAGCTGATTGAGGAGAAGGGAGCTGTGGAAGCCCTGGCAGCAGCCCTGGCCCACATTTCTGGTGCCACGTCGGTAGACCAGCGCTCCTTGATCAACTCAGAAGCGGGCTTTGTGACCATGATCTTGCGGTGCTCAATTGAAATGCCAAACATTAGTTATGCTTGGAAAGAACTTAAAGAGCAGCTGGGTGAGGATATTGATTCCAAAGTGAAGGGAATGGTCTTTCTCAAAGGAAAGCAGGGTGTTTGCTTTGATATCCCTACTGCATCAGTAACAGAAGTACAGGAAAAGTGGCATGATTCACGGCGCTGGCAGCTTTCTGTGGCCACAGAGCAACCAGAGCTAGAAGGTCCACGGGAAGGATATCGCAACTTCCGAGGACAGCGGGAAGGCAACCGAGGCTTCAGGGGACAGCGCGAGGGTAACCGAGGTGCCAGGGGACAGCGGGAAAGAAGTAGAAGCTTCAGAGGACAGCGATCAGGAGGTGGCAACAAAAGTAACAGATTTCAAAACAAAGGCCAGAAACGGAGTTTTAATAAAGCATTTGGACAGTAACCTGAAGTAGAGGATTTATTTGGCAAAAACAGAACTATGTTCAGCAATGTGGAACTGAACATTATTTTTCATACAAAGTTAAAAGCACGTTGTATTTCCTTCCTGACCACTTGCCCAGTCCCCATCTCTTTGAGAGAGAAAAGCTTCATCTAAATTATTTCATCTGATTGATGACTGTCATTTATAACTTTATTGCTACTTCCGTCTTGGGTATTCCTTTTGAAAAGGTGTATGGATTCATTACATATACTAATGTATTGTTTATAGAGTATAAGATAAAGTGAAGCAAGTATCTGCTGATATTTTTTAAGTTGACCTGTCTTTATACTTAGAAATGTCTCTTAATAGTAGGCGTCCCTGGTGGCTCAGATGGTGAAAACTCTCCTGCAATGCAGGATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTAATCTTGCCTGGAGAATTCCATGAACAGAGGAGCCTGGCAGGCTACAGTCCATGGGGTTGCAGAGTCAGGCATGACTAAGCAACTATCACTCACACTGATTCTAAATAGTGCCCTTCCTAAATACCATGGGGAATACAACAGTTTCTAGAGAAGCACTTTGAGCACTCAAAGCTTTGTTTTCTAACTGGTATTCCTTAGCCACTTGCCCACCAATTACTCCTGTGGTTCTAGCATATATCTTCTGAGAATTAATAGTGAGCAGTGTTTCAAAGCAAGGTTTCACACTTAACCGTGATTAATACAGTTTATGCCTGCATATGCTCTAGATTTGGAGGATGGTGATACATTTGATAGGAGATAGTATTTAGATTAGCCATTGTTATGTGCATTTTGATACATTTTTAGCTTCTCAATAAAAGGTGATTTCATGCTTCAGTGAATTCTTCACAGATTTAAAAAATAATGTATATGTGTAAATACACGTATTTTACTAGAAAGCAAGTATCTTTAAGGAATTCCACGTGTATAACATGGCCCCATAACTTTCTTCGTAAGTAAGGAGGCTAGATAAATGGTGCTTGATGATAATGTACTCCACTTCCTATTGGAAAATTAACATTATTTACCAAGAAGGAACTAGGGGAATAGGGGGCAGAGATTTGGATTGCTGAAGAGTCAAAAATCCACTGAAAATATTTTCTACATGCAAAAAGGAAACATGTATATTGAGAGCAAAGAGAAGAACAAGTGAAGGTGCATGATAAAGCTTTTTTTTAATGATGAAAACATAATGGTTCATTAGTGTGTCTAGAGCTTAATTTCTAACAGGCAAGCTGGGGATTTTAGGTACAATGATCCAGTTTAGTTTCTCAAAGCCTAGCTGCTATAGCCACAGTATAGGATCTCTTCCTATTAGATTGCTACTGCATTGAAATGTTGCAGCTTCCTAGAGTTCTTTTTAAGAACAAACTATGGTTATTTTTAAGTTGTTGCTTTGAGGGAACCGAAGAACCTAAAATAGCCCCTGGCCAGTATTGCTCTGAGGTCTCAAGTGTTATTTCTCTGGGAAACTTTGTACATGGTACAGGAGTTGAAGAGTAGCATTGTCTTGCCTTAATTTCTGTACTGGGAATTTCAGGAAATAAATTGTTAAGAGGAATTCAAACACATGGCCTATCTTACTTTCATTTAATTATTTTGAACAATTGAAATCTTGCTAGACACTGGTTTCTCTGACTGGGTCTTGATAGCCAACTGCTTCTTACGCAAGTCACCTTTTCAGTAAGGGGCTCTCAGATACCAGCATTGAGATAGCATTCTTTTTCTGTTAAGATTTCAGTTCTGTTTTTGAATCCTGACTGGATGTCTCTCTGCTCTCACATTCTCTTGGCTTTTCTTCTTTGGTCCACTTGTCAGTTTTATCACTTGACCTCCTCATGGTTTCCCATTCAAACCAGAGGAAGTTCGGTAGTTGATGACCAACAACTCCTGCCTTGTGGATCACGTTTTATTAAATTCTGCTTTTGCTGAAATACTGAGCATACTTAAATAACAACCCAAACATTTAAGTTTGGATAGGAATGGGTTGGTTTCTCAAGTAGGACAGTGTACTTGTACTTTAGGAGGAAATACTCAAGAGAGTAAGGGAGAAGATGAATGGGAATTTCACTTTACACGGCTTAGGACAACATGACTCTCAATAAATGAAGCTAAAATTTCTCCTGGATCCCAGAATTCAAACCATATTTATAAATGTATAATTCAACTACTGTACGGTTTAAATGGGCTTGTTGAGCTAGCCTGGGAAATAATACCATTTTTACCATTTTCTACAGAGAAAGTATTTTCCAACTTATGTATCAGACAACTCAATGAACTTTTAAAAACCAGTTTTTATGTTGGAACTATCTGTGCAGCATTTCTTTACAGTTATACATAAAGTGTTTTTACTGTAAAACTGAGTTAATGTATACAAATAGACCCTTATGCCATAATAAAATTACTAGTACTTACTAATTATGTTTTTGGTGACTTTTTTCCCTAAAATTGAAGCTTGGAATTTTTATTTTAAAAATAATAACTGATGGGTATAAATATCCAAACAGAAAAGCAAGTAAGTCACC EMBV3_14938 ATGGAGACACAAGAACTTAAATGGCAAAAGGGAAAATTTCAACTTGCTACAGAAATAAAG Variant GeneID:521905|CCDC73:XM_002693493:137_cdna 211^318 2 EMBV3_11012 GeneID:521905 15 GENE CCDC73 NULL coiled-coil domain containing 73 EMBV3_29705 GCAGAGTTAACAGGCAGCCCCACGAGAAGGTGGCTTGTATTTCTTCCACTTTTTTGCTTC Gene BVV0102_334512 + 0 NULL GK000013.2:61257122-61265405 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045842 1 XLOC_026545 Coding TCONS_00045842 XLOC_026545 Coding Coding ZCCHC3 13:61253861-61258768 o TSS33373 4545 1 TCONS_00045842_4 216 0.272167216721672 2 0.0739910313901345 0.00258981559128032 0.00120864992456395 0.00205050646495409 0.00110199143299821 0.000449465123580884 0.000641714618007189 0.002776846831225 0.00189545474404281 0.000986144114255778 0.000607380093141912 0.00013014947899504 4.0705207632027e-05 0.000362278253782233 0.000458016893016623 0.000302557289403322 0.00034560973260779 1.5966850191612e-05 0.000105639524744263 0.00259828189097142 0.0030430526657813 0.00146526783574896 3.73846287976569e-11 3.05460407324933e-11 8.7926506807851e-06 0.00519698149645621 0.00141207764204911 0.00155506251768329 3.34566390311834e-05 7.52473891130665e-06 0.000274943370553738 NM_001080234.1 ZCCHC3 Bos taurus zinc finger, CCHC domain containing 3 (ZCCHC3), mRNA. 0.0 3494 99.79 0.428162816281628 NM_033089.6 ZCCHC3 Homo sapiens zinc finger, CCHC domain containing 3 (ZCCHC3), mRNA. 0.0 2199 84.46 0.428162816281628 TCONS_00045842_4 sp|Q9NUD5|ZCHC3_HUMAN ZCHC3_HUMAN Zinc finger CCHC domain-containing protein 3; 4e-46 160 81.60 0.569444444444444 0 coding 0 0 0 0 -0.52813140372465 0.185689351828284 0.0622962573204288 0.228132309544457 AATTGAGTGTGTGAATCTAAGATTTTGATACTTCCGGTTAATGATCCCAATTCATATGATCCTGGGCATTTGGGGCGGAGAAGGGATGGAGGAAATCAGGTCAGGAGTTATAAAGTGAAGGAATCGGAAGCACAAGAGTTGGAGATGCTGGCTTCCTGAGACCAGTACTGGAAGTGGAGTAAAGGGAACGCTTTTAAAGAACTCACAGGGATTCTACCTACCCTGCAAGAGAAATAGGAAAGAATCCAATACTGGCAGAAAGGAAGAAAAACCTTTTCTGGAAACCCACCGTGGACTAACCTCTTTGACACAGATTATCTCCTAGAAACCCCACTTTAGTCCTCTGAGAGTAGATATTAATATACCCTTTGCTATGAATGAGCAAATTGAGCTATGAAAACCGAGGTCACTGTCCCCACGTGACAAAGCTGAGATTGGAAGCAGTCAAACTAGGGTCTCCCTGACTCCACAAATCATCTTTTCTTTCACTAAACCCAGAAAGATCACTGAAGCACCCTGAAATACAAGCAGTTATGGTAAAGAAAATAAGATGACAAAAGATATTAAACCCATTGCCTTCAAGCACTCAAATTTTATCACTGCTTCCAAACACAAGTTGAGACAACAGGGAGGAGTAACAGATTGTGTCCAGTGCTAGCTTTAGTTAGGGAATCTGTGTGAAGGAGGTTTTCTAGGGAGTATAATCGAAAGAGTCCTTTTTCCACAATGTCAGAAGCAAAAAAGTGGAAGAAATACAAGCCACCTTCTCGTGGGGCTGCCTGTTAACTCTGCCACTTGGCCAAGTGATTTAACTCCTATCTCCAACCCCCTGCTTCCTATAAAATGGGTGTAATTACAGTGCCGTTTTGGAAGGTTCCATGTGATAAAGCTTGCAATGTGCTTAGAACAATATTGGACACTTAAGTCCTCGATATAATTGCCATCACGAATATGATGGAGGTCTTTTTTAAAAAAAATAATGCAATGTCACTTACTTGGAAGTGTCTCAAAAAATGAGTGACGGATAGAGGTGTAGTGTGATAAGGTATAGTAAAATTTTAATGATAGAAAGTTAAAACAGTTTAAATGTTAAAAGTAAAATGTTCGCCGCAAAATTCTACTTTCTGCGTGTTTGAAAATGTCCATAATCCAGGGTTGCAAAAATAATGCATTGTGATCTGCTTTGGGAGGAGGGAGAGCTAAGTTTTGTCTGTTTTGTTTTAAAATAGAAAAGGTACAAAAACGAAAACAAAATGGGCGAAATCTTCCTCAACTCTGTCCCGCCTTCGGACTGTGGGCCGTTAGCAAAGCCACTTGAATGAAATCATCGAGGACCGCTTGCGAAACAACAAATCCTCGAGAGCGAGGGCAAAGCTGCCAAACCCTCGCGACGGACAGGGACGCGCTCCAAGATCCCCATCCCGATTCGGAGCCGAGGAGGTGGGGTTGGAACGAGCACTAGCGGAAACGCGGTCCAGCCCTTACCAGGGGGTTCCCGGCCCGAAGCCGCAGGACGCCCGAGCGCCTCAAGTAGATACTTTGGCTGGGCGGGGAAAAGCAGCATCGAATTTCAAAAAAAAAAAAGCCCAAACCCCCACAACCCCGGGCGGGCGCGCGCGATGGGCGCACTTTGGCTGCGGGAGCGAGTGGAGGATGCTGGGAAGGAGGTAAAATGGCCACCGGCGGCGGCGCGGAGGAGGAGAGGAAGCGGGGGCGGCCGCAGCTCCTGGGCCCCGCGCGCCCCTCGACCAGGGCCGAGGAGGCCGAGGGCGGCCGCGAGAAGATGGGCTGGGCCCAAGTGGTGAAGAACCTGGCCGAGAAGAAGGGCGAATTCCGTGAGTCGCGGCCGCCGCGGCGGGAGGAAGAGAGCGGCAGCGGCGCGGGAGGCGGGCTCGGTGCTCCCGCGGGTCTGGCGACACCGAGCCTCGGCGACTTCCCCCCAGCCGGCCGCGGGGACCCAAAGGGCCGCCGGAGAGACCCAGCCGGAGAGGCGGCGGACTCCCGCAAGAAAAAGGGTGCAGCCGAGGCGGGCAGGAGGAAGAAGGCTGAGGCGGCACAAGTCCAGCTTGAAGACGCTCTTCATTCTCTTCCGGAACGAGACGGTGGACGTGGAGGACATCGTGACCTGGCTCAAACGCCACTGCGATGTGCTGGCCGTACCCGTGAAAGTGACCGACAGGTTTGGGATCTGGACCGGGGAGTACAAGTGCGAGATCGAGCTGCGCCAGGGGGAGGGAGGGGTCAGGCATCTGCCGGGAGCCTTTTTTCTGGGGGCCGAGAGGGGCTACAGCTGGTACAAGGGGCAGCCCAAGACGTGCTTTAAATGTGGTTCCCGGACCCACATGAGCGGCAGCTGCACACAGGACAGGTGCTTCAGGTGCGGGGAGGAGGGGCACCTGAGCCCTTACTGCCGGAAGGGCATCGTGTGTAACCTCTGTGGCAAGCGAGGACACGCCTTTGCCCAATGTCCCAAAGCGGTTCACAATTCCGTGGGAGCTCAGCTAACCGGCGTGGCCGGGCACTGAACACCCGCCTACCAGCCAGGGTGAACACAGAGCCAGCTTACCCCTGTTAAGTGCCAAAACTTTTTTTTAAACCGTTTTTTATAGTTTTTTGAAGGAGATTTTCTTAAACCTACAAGAGACATCTCACTCTGCCTTCCTAAATCGAGTTTACTCCTTTCGGCCTTTCCTGAATTTGGTGACTCTGTCATCAGAATTGACTACCGAGAACTGTAGTGTGCAGATATGTTGCCCTGCCCTTTTTAAAATTTTATTTTCATTTTTGTATTCGGAGACTTTTTTTTTTCTGGTACTTTTTTACTTCCTACGCCTTGTCTTCTCCCTTGGTTTTTACCCTTGGAGCCGCCTTGCTCATCTATAAAGATGGGCATAAGCCCCAGTGCTAGGTGGGGGCCCAGCACATGGTAGGCACTCCATCAGTGTTTGTTGAATTGAGAACATCGTTGACTCTGGCTTCTGTCAGGGTGTTTATCTTTTGCAGTTCATCCCGTCCCCTTTTAATTTGCTGCTTCTAATCTGTGTGGTCTGAGAATTTGTGAAACCAGTGTTGTTAGAAGTGTATGTAACCTGAGTCAATAAGCTCTGAATGGTGGCCACGGGCCTCTCCTATGGCATTAGAATGCATGGACTTTGTGACAGCGCTTTCAGTGGCTCAGAAGCCGTTCTTCACAGAATCATGGAAGCTGGTTTTCCTGCTGAAAAGGACCTAAAAGTTGGTTAAGACCAATCCCCTGGTTTTCCAACAGATGAAACAGTACCAGAGAAGGTTATATGACTGGGTCGAAATCACATAGCTGTCTGGTGCCAGAGCTAGCCTAGAGTAGAGTTCCCTGACCCCAAGCCCGGTGCTCATTCCACTACCTCTCACACTTCACAACATTTTCCTCAACACTTGAGGGCCCAGAAAGTCTGCTCTTTCCAGAATGAGCCCAGGGGAATGCTAAGACATCATCTGGGGGAGGAAGCAGAAGATTTGGCAGGGGCTTCAGAACACTTGGGAGATATGGAAGGGACAAAGGAACACAATCCAGGGTGCACTCTGATGCCCGGGTACCACATCTGGGTTCAAGTGGTCCAGGTCTTTGTGACCTTTCCCCTCCCCAGTCATCGCCATCAGTGAGAAGTAGAAGCCCTCCTGAGTAAAGAAAGGTTTACATTTGCACCTTAGCTTCAGTAGCTAGAGCCCCTAGAGAAGCAGCTAACTGGAGCTCATCTGCAACCTCCTGGCTCACAGGAGAAAATGGAATTCTAAGTGAACTGTTAACTCTAAAATGTACTTGTTAAATAGGCTAAGCGAGGGGGCATTGGGTCTACTAAGTGTTACCAAGTTAAAGTAGAAAAGACAGTACACTGCTTTTCTTACTGTTTTTGTCTTTGCTTTATGTTTTGCTATTTCCTTGTGGCTTAGAATGTAAAATCGGTTGTTTAAAGTTTTGTTCTGAATAAATATTTATCTTTTGTATTGCTAATGCTGCTGCACTATTTCCTTTCAAAATATTGGCTGCAGAGGTTCACAGACCCTAGTTCAACCAAGGCTTGCCACACACCATTTGTTTACCTTGCAAATATATGTCCAGCTGCACAGGCAACATTTTACACCTACTATGTTGTCCCCTGATGCTGGGAAAGATTGAAGGCAAAAGGAGAAGGGGGCAGCAGAGGATGACATGGTCAGATAGCATCACTGACTCAATGAACATGAATTTGAGGGAACTCCGGGAGGGAGTGGAGGACAGAGGAGCCTGGTGTGCTGCGACTGAACAACAACAAATGTTGTCCCAGGCCCTTGGGAGTTGTTACCCAAACCTCTGCATCAGAATCACTTAGTATATAAAACTAAAGTGTTAAGTCCTAACTCACCTCCAAGGAATCAGAATCACTGGAGTGAGCGGAAATGTATTTAATAAGCACCCCAAGCAACTCTTGGGCAGCCAAGTTTGAGACCACAGTTCTGAATAGTACTAACAGGAATGAGAGGGACTCTGCCCTCTGGAGATTACAAACCAGTGGGATAGACAAAGGT TCONS_00045843 TCONS_00045843 s 5' 0 TCONS_00045843 TCONS_00045843 s 5' 0 EMBV3_28066 AACAGGAGAGACCATCGTTTTCAGTGTGACCTCAGCAAGGGGGACGTAAAGGACAGACCT Gene BVV0102_150490 + 0 NULL GK000017.2:29354946-29376197 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075151 TCONS_00076867 TCONS_00076868 TCONS_00076869 TCONS_00076870 TCONS_00076866 TCONS_00075152 2 XLOC_046502 XLOC_046934 Coding TCONS_00076869 XLOC_046934 Coding Coding PHF17 17:29364810-29664654 j TSS57613 6746 1 TCONS_00076869_6 863 0.0167506670619626 14 0.977548250250965 0.0039618568156229 0.00325643402926416 0.00202017199090066 0.00122778907696866 0.00162981915283916 0.00110876765729215 0.0013495433003823 0.00138067474736149 0.00213085553929833 1.88163364865309e-55 1.43134615055919e-16 0.000134169066901766 0.000421343460105837 0.000582126565311256 0.000458453617661355 8.62902802573355e-44 1.34602674413112e-22 4.80471538046055e-22 0.00154493245718197 6.42381216644805e-06 0.000546182320239326 7.96672449450417e-50 6.62371640702957e-16 3.68531336257741e-42 0.000630673251254892 0.00197597022356077 0.00103058919406886 2.42258617095465e-31 3.90829106290476e-39 1.94787440537195e-47 XM_005217553.1 PHF17 PREDICTED: Bos taurus PHD finger protein 17 (PHF17), transcript 0.0 9840 100.00 0.808627334716869 XM_005263230.1 PHF17 PREDICTED: Homo sapiens PHD finger protein 17 (PHF17), transcript 0.0 6644 86.74 0.80847909872517 TCONS_00076869_6 sp|Q6IE81|JADE1_HUMAN JADE1_HUMAN Protein Jade-1; 0.0 1660 95.37 0.97566628041715 5 coding 0 0 0 0 0.0517788412489923 0.627641490544631 -0.0242006438132126 0.625076790817396 GCAGAGAGGAACTGCCTCTGAAAATGGTGCCTCTGACTGGTTACTTGTGTGGCAAACCCCAGAACGCGGAGCTCTCCAGAGTAACTTTCATTCTTATGAGAGTCTGCATCTCACGCAGCTTGGAGTGTCATTTCTCCTGCTGGGGGTGTCTGGACAGCTTGGGGAGAGCAAGTGGACTCTAAGGACACGGAAGAGTTGAACGTTAGTTACTTTTGTACAGATCAACAGACAACCTGCTACTTGCATGACAAATGCTTTTTAAACCCAAGGACAAGGCCTGAGATGTCATAAGGACTCTATATACCTCAGCAGTTTGGACTACACCACCAGAGTGCACAGCCATTCCACATTCATTTCTCTTGCATCTCCAGCACCATGAAACTGATAAACCCCAGCTGCTGAAAAAACAGAAATGGAACATGGTGATACAAGCAAATCAAATACAAGCAAATGAAAAAATCCAGTCTGCCAGCAGCGGATTGGCCCAGAACAGCAGGCCGTCACGTGACCAAGTCCCAGCCTCTGCGAAGCACCCACGTCTGAATTTCCATGACGCACCTGCTGCCGTCACATTGGCTCTCAAGCTGCCTGCTGTTTCCCGGGGAGATCATGAAACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACGACAATGGCAGCCTGTCGACTACCTGGTCCCAGAATTCCCGATCCCAGCACAGGAGAAGTTCCTGCTCCAGACCTGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACAGACCTGATCACTGCCATGAAGCTCCATGACTCCTACCAGCTGAACCCGGACGAGTACTACGTGCTGGCGGATCCCTGGAGACAGGAGTGGGAGAAAGGGGTCCAGGTGCCAGTGAGCCCTGGGACCATCCCCCAGCCTGTGGCCAGGGTCGTATCTGAAGAGAAATCCCTCATGTTCATCAGGCCCAAGAAATACATTGTCTCGTCAGGCTCCGAGCCTCCGGAGCTGGGCTACGTTGACATCCGCACACTGGCCGACAGTGTGTGTCGTTACGATCTCAACGACATGGACGCCGCGTGGCTGGAACTGACCAACGAGGAGTTTAAGGAGATGGGAATGCCCGAGTTAGATGAATACACCATGGAGAGGGTCCTGGAGGAATTTGAACAGCGGTGCTATGACAACATGAACCATGCAATTGAGACTGAGGAAGGTCTGGGGATCGAGTATGACGAAGATGTCGTCTGTGACGTCTGCCAGTCACCTGATGGTGAGGACGGCAACGAGATGGTGTTCTGCGACAAGTGCAACATCTGCGTGCATCAGGCCTGCTACGGAATCCTCAAGGTCCCAGAGGGCAGCTGGCTGTGCCGGACGTGCGCCCTAGGCGTTCAGCCCAAGTGTTTGCTGTGTCCCAAGAAAGGAGGAGCGATGAAGCCCACCCGCAGCGGGACCAAGTGGGTGCATGTCAGCTGTGCGCTGTGGATCCCCGAGGTGAGCATCGGCAGCCCCGAGAAGATGGAGCCCATCACGAAGGTGTCCCACATCCCCAGCAGTCGGTGGGCGCTTGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGCATCCATACAGTGCTCCGTGAAGAACTGCCGCACAGCCTTCCACGTGACCTGTGCGTTTGACCGGGGCCTAGAGATGAAGACTATCTTGGCAGAGAACGACGAAGTCAAGTTCAAGTCCTACTGTCCGAAGCACAGCTCTCACCGCAAAGCCGAGGAGGGCCTTGGTGAGGGGACTGCTCAGGAGAATGGTGCTCCCGAGTGCTCCCCGCGGGATCCGCTGGAGCCCTTCGCTGGCCTCGAGCAGAATCGGGAGGAGGCCCACCGGGTCAGCGTCCGCAAGCAGAAGCTGCAGCAGCTGGAGGACGAATTCTACACGTTCGTCAACCTGCTGGATGTAGCCAGGGCCCTGCGGCTGCCCGAGGAGGTGGTGGACTTTCTGTACCAGTACTGGAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCTCATCACTCCAAAGAAAGACGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGTCTTGTTTAGGAGGCTGCAGCTGTTCACGCACCTGCGGCAGGACCTGGAGAGGGTTCGGAACCTCACTTACATGGTGACCCGCAGGGAAAAGATTAAACGATCTGTGTGCAAAGTCCAGGAACAGATATTCAATCTTTACACTAAGCTTTTGGAGCAAGAAAGAGTTTCAGGTGTGCCTTCTTCCTCTTGCTCCTCCTCCTCACTGGAAAACATGCTTCTGTTTAACAGTCCTTCTGTGGGCCCTGATGCTCCCAAGATAGAGGACTTGAAGTGGCATTCTGCGTTCTTCAGGAAGCAAATGGGTACTTCCTTGGTTCACTCGCTGAAGAAGCCCCACAAGCGAGATCCATTGCAGAACAGCCCTGGGAGTGAAGGCAAAACCCAGCTAAAACAGCCAGACCTGGGGGGCAGAAGGGAGGGGACGGTGGGCCCAGAGAGCTTTCTGAGTTTTGAAAAGACGTTTGCAGAAGCACGGCTCGTATCAGCACAACAGAAAAACGGTGTGGTGATGCCAGACCACGGGAACAGGAGAGACCATCGTTTTCAGTGTGACCTCAGCAAGGGGGACGTAAAGGACAGACCTTTGAAACAGAGTCACAAGCCTCTGAGGTCCACAGACGTGTCCCAGAGGCACGTGGACCACGCCAGAGCTGCCGCCTCCCCTGGGGCGGGGCAGTCGGCGCCGGGCACGAGGAAGGAGGTGGTGCCCAAGTGCAACGGCTCCCTGATCAGAGTGAACTATAACCAGTCTGCAGTCAAAGTGCCTACGACACCGGCCAGCCCAGTGAAGAACTGGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGGCAGCAGCAGGGAGAGGCCCCAGAGGCGGCCTGCCACCAGCACTCAGACTACTCCTACCTGGGCCTAGGCCGAGTTCCAGCCAAGGAGAGGGCAAAAAGCAAACTGAAAGCTGACAACGAGAATGACGGGTATGTCCCTGACGTAGAGATGAGTGACTCGGAGAGCGAGGCCTCCGAGAAGAAGTGCATCCACGCCAGCAGCTCTATCAGCAGGAGGACAGACATCATCAGGAGAAGCATTCTGGCCTCTTGATGAAACGGGCACGATGGTGCAGGAGGCGAGAGCTCTGACACAGGGGAACGAGCGGAAACCCATCACTCCTGAGCTACACAAATACATTTACTTGCAATTCTGATTGGAATTTTTTTTCAGAGTCATTTATAAATCATTGTTGTGAGAAGTGTGTTATTTGCAACTTGTTGAGGAAACACAAAAGTAGATTGTAACCGTAAGACACTGCTAAGACTAGAGGCTGAATTAACACTACAATAAGAATGGATGAAGTAAGTTTCTCAAGAGGGCTAGGCTGAACTAAGCCTCATGAGTGCTTACTGCCCTCTGTATCCTTCCCAAAGCACAAACTCTTAGTTACCTGAATATATGGAATCAGAGATGGTTCTTGAGGAAACCCTCACGTATCATTTAGTAGCCCATAAAACTTATTTTCTAGGACTGTGGTGATCTTGAAATCATATTTATACTTTGGCCCACGGACTGTTTTGTTGCATTGTAGTATACAGGCAGTAGCTCTGAAGCTTCAGTAATTCTAGGGAATTCATGTGTAAATAAAGCAGATAAGGGAAGAGAAAAGTTTTAAAAAGGCCGTTACCGGAAGATCTGAAGGGACAGGGTAGAGCTGCCTGAGCTTGGAGATTTAGGGTGAATGGAAGCAGCCAGGTCCTGCTGCCGGCAGCTCTCGACTGTGTTCTGGATAGAGGGCAGGCGGAGAGCGACGTGTCACAGGGCTCCATCCATGAGAAAGGACAGTTGAGGTCCCATCCTTACCAGTCCTCTCAACCTTTCTCTTCCCTACCGACTGCCTTCTGGGCTAGCTTGGGATTCCGCTGGCCTTTGGCAATACCTGGCCACCTGGCTTCCAACAACACAATGGCTGTTCAAGTTTAAGCAATGACTTCCAGACTCTGGTGACTCGTGTTTCCAGAGAGGAGCACTAGTGTGTACGCTGGGGAGTCCGGCCTTCCAACACGAATGGGTTCCTTGGGAGAAAAAAAGGAAAATGGAAAAAAAACCCAAAATAGGTTATATTTTAAAAATAATAGAAAGGCAATAAGTTGCGATAACCTCTTAACCCTTGACCAAGTTTATACAGGAAAGAGATTGAAGTGTAACAGGTTTTCTGGAGTCAGAGTTCTAAGCTCTAATTCGTAACTTGGACTTTCTGATTGCAAATGGCAATAACTAGTAAGTTATCAGCAATAAATTTAGCATTAAATTTGAGTACAATGTTCTGTTTTTGCACTCACTGCAGTGCGTTTTGTATTAAGACAGTGGATAGTGTTAAGGTCCTGTTAATTTTCTTTGGAATTCAATGTAGTTGTGAATCAAACTTAAGGAAAATTTAAGTAGCAGTGAGATTTAGAATTATGGGCACTTGGAACAAGCCCAACTTCCCCTAAATTATCCCTTAGTTTGTTAATACCAGTACTCAGATTCCTGATTCATTTATACATTTATTTCCATGTGGCAGGGACATTCTGATACTTAATGAGTAATGCTTTGAGTTCTGTAGTAGTTACCTTTCAAGTCTTCCAGATGACTGTCAACAAGGAAAAAAGGCTTATTGAATTCCATCTTGCTATGCAAGTTTTATCAGATGATCAAATAGTAGATCTGATACATCCCCATTGTATGTATGACATTTTCAAACCAAGTCTTAACTTTTCAAATACATTTTAGTAACTGATTCAGGGGAGGGGAAAGAATGACCCAGGTTTTTAGACTGACTATTTTTGAGCTATGGGGCTCATTTTTCAAAGAATGTTGTCCAGATAAACTGTTGCTACAGATATTAGAAGTTTCTTATGAATCCAAGTTGTACATTAACTCAGCATAATTTAAAAATCAGATCTTTTTTTTTTTTTCTTTGCATAAGAGCAAGAAACCTTTTGCTGGATACAGAAGAAGGTGGACTCTTTACAGTTCTTTTTTGACTACAGCAACAGCTCTGGGTGAGAGTAGAGTATATAGAGGGATAATCTGTCAAGCCATAGAAAGAAAATCTAAATTCTAGTAAGTCTATGACCTCTCACCGTTTATAAGAGGTACCAGATTCATTTGCACTATTAGGAATGCTAGTTTTGTGCAAAAATAATGCCTTACCTGTTTTTTCCCCACATTTAGGTTGAAAAGCTTTCAAACGTTCCAAGTTATGCTGAACCAAAAAGAAAACAAAACAAAAATAAAAAACCCCACACAAAAACAAAACACACAAACACAAGAAGCCCACACCTTTAATTCCTGCTTTGAAATGCAAATGGTACAGTTTCTCTGACAGTGTAATGACAGCTCTGTAAGTCAGTTTCGCGTCCTGCTGGGAACTCTGTATGAGGTTATGAGCGGCAACTAACCCAACCTGCCCACTTGCACTCTGAGTATGGAACCATTTGCTCTTCTTTTCTTCTTTTTTTAAAGCTTTATCTTTCCGTGTGCATCCTGACCAAGAAATATCTTTGATTATGATCAATGTATTATGTCAAAAATGTAGGCTAGTTAAACTTTTGTAAAGTTGCCTGGAATGTCATTTGTTAGGTTATAAACACAAAATCTAAATGAAGGGTTATATGTGTTGTGTACAAATCTTAATTATTTTGAAATGGACAAACTTGTCATTACATTTGTAACCTTGTACAGAGGATTTTTCACTATGTGCCTAGCTTGGTGTCCATTCAGCGAAAATTGGGTTAAAAAAAAAGGTGCATGAAGAGTTAAAAATCAGAATTAAAAACAAAAGTATATGTAGAGATGACTATTTTATATTACATGGCCCAATCCTGTATTTATTTCTACCCCCTTTTTGAAAGTATTTATAAAACTAGTTGAGGACAGCTGTATTTTTTTGTTGAACTATTTAGTAGAATTTGTGCCTTTTTGTCTGTATGTGAATAAATGCTGTACATTTTGCAATACATTTTAAAGCGTCATCTGAAATCTAGTTTTGCTGAATATTTAGATGCACATGTACACACTGTCCCATGTGATGGCGCGTGTCGCTGTCTCACTGGCAGGAAGACTGCTGGGTACAAGACAAGACTGGATGAGCACGGGTTCACTGAGCTGCTTTCTGGTTCAGCTTTGATGGTGAGACCCCGACAAATCATGGCCTGATCTTGGTGTCCCCTCGCCGGACTTCTTTCCAGAATACAATGTTGGATCTGAAAACAACCAGTTGAAGCAACTTAGTCAGGTTGGAGAGACCTGGGTTTAAAGGCTAAACTGTAGTTTACCAGCCATGTGACCTTTGCCAAGTCACCTAGTAATTATAAGCCTCAGTTTTCCTTCTGTAGAAAGAAGAGTGACATCCTTCCATCGTCTTGGGTTTGCTCTGGTATTTGAAGAAAGCTCATGGAGCATCTCATAGAAAGCAAGCAGTAGGCAGTTAGTAAATGTTTGGCTGTCATGTTTATGATTAAGAAACTTATTTCTCCAACATAATGTTGACTGGTAAGTCTGAGGCAAAAAAAATACATGTTACTCCTGAAAGACTGGGAGACTATTAAAAGTTATTTTTCAAAGAATGGTTTCATTAAATGCATCATTTTGATCACAGAATTCCACAATATTAGGGCAAAAAGAGATACCTCCATGCTTTACAAAGAAGATCACAGCATTAATTAGGC EMBV3_26644 CGACGGAAAAGTAACTGTGGCTGGAGGAGTGGATGACACAAGAGGACTGCCCTTGACCTT Gene GeneID:514978|LOC514978:XM_002692316:68_cdna Constitutive 0 NULL GeneID:514978 13 GENE LOC514978 NULL similar to lipopolysaccharide binding protein EMBV3_43202 GCCAGTGTTACTGTTTTCCAAACCATTCCTCTGTGATCTAAGCCTGGGTACAAGTTCTGG Gene BVT0102_235182 + 1 EMBV3_18213 GK000013.2:66353756-66362561 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049721 1 XLOC_029852 NonCoding TCONS_00049721 XLOC_029852 NonCoding NonCoding - 13:66355658-66357836 - TSS36897 2178 1 TCONS_00049721_4 101 0.463728191000918 1 0 0 4.61361607781182e-06 3.82396339924877e-05 0 1.81346622060698e-05 5.58401520167513e-05 1.87428891153107e-05 9.05221349763953e-07 0 0 0 0 0 0 0 0.000169771561861926 9.90952894725603e-05 4.60806234391316e-05 0 0 0 0 0.000252727810914073 0.000346377421374069 0 9.70449402565342e-06 8.07045994669337e-06 0 0 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 2e-52 212 83.74 0.0918273645546373 NM_001253799.1 ZNF331 Homo sapiens zinc finger protein 331 (ZNF331), transcript variant 4e-29 134 69.28 0.152433425160698 0 noncoding 0 0 0 0 -0.109487322940962 0.482810502464956 -0.0108945197046075 0.885759252239271 CCTGAAACTTTAGAGAATAAACTCAGGGGAGATGTGGAAATAATCATCACTACTGCCAGTGTTACTGTTTTCCAAACCATTCCTCTGTGATCTAAGCCTGGGTACAAGTTCTGGCTCTGTCACTTAATTAGCTGTTATGACCACAGGCAATTTGGTCTACCACTTCCAAGCTTCAGTTTCCTCATCAGTAAAAAGGAACAGTAATACTCATCTTTTCAGAGAATGAAATAGGATAATCTGTATGTTACTGTTCTTACCTGGCTTCTCTGCACAGGGCTGAGAGTAATACAGAACGATTAAAGTAACTTGCCTAATACCACACAGCTTCTAAGTGGCAGAACTGGGACTGATGGCCCAGAGAAGTAGTCCTTATGCATCAAGAGAGCTTACAAAAGTGCGCTGACCTTACCCCCAGAGAGTCCAGGAATCTGCACCCTTCAGTGATGCCAAAGAAGATTCTCTTGCTGCTGCTCCAGGGACCTGATCATTTATAATCAGGGTTCTGATTTACCCAAGGAAACTTGGGTTGGGAAGACAGCATATCATCTTTCCAAGTTACAAGGTGAGAAGAAGGCTACCACCAAGTAGTCCCCTAAAACCATTCGACTTCTCAAAGCTGTAGCGGCCTGAAGGTTAAGTGTAGCCTTCTTGAGATGGTCATTTTCATTACATAAGTAGTCCACATTCACTACAAATTTTAAGTAAAGGTACAGTAATCTCCCACCCATAGTTTTACTTTCCACATTAATTTATCCACGGTCAACCTTGGTCTGAAAATATTAACTGGAAAATGCCAGAAAGAAACAGTTCATGAGTTTTAAATTTCATGCTGTCCTGAGTAGCATAATGAAATCTCCCACCCTCCAGGCCTGGGACCTGAATCACCCCTTTATCCTGTTTGTTCATGCTGTATATGCTACTCACCCCACCTGTTCCTCAGGAGCCTGCCTGGTTATCAGATCCACTGTTGCTATACTGTGCTTGTGTTCAAGTCACCCTTATTTTATTTAATAGTGGCCCCAAAGTACAACAGTAGTGATGCTGGTGATTCAGATCTGCTCTTACTGTACCTGACTTATGAATTAAGCCTCATCATAGGTATGTACACATAAGGAAAACATAGTATACCTAGGATAGCCACAGTTTCGGGCATCCACTGAAGGTCTTGGAACACATACTCTGGGGATAAGGGAAGGACTACTGTTTATAGGAGAGGAGTTCAGTATAATGACTAAGATCCCAGCCAGCTTTGGGAGAAAAACAAATGTATGTAAAACATTTAGTAAAGCTGGCACCTGGTAAGGGATCAGTGGGCTTCCCAGGTGGCACTAGTAAAGAACCAGCCTGCCCATGCAGGAGACAAGAGGCATGGGTTCAATCCCTGGGTTGGAAAGATCCCCCTGAGGAGGGCATGGCAGTATACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGGGGAGCTTGGCAGGCTACAGTTCTGTAGGGCTGCAAAGAGTCAGATACAACTGAAGCAATTTAGCCTGCACACATGCCAGGGCTCAAAAACGCTAGTAAAATATTTCTTTTAGGCAAAAAGAAGCAACTCGGGCCTCTAGTTCACAACCAGTGCTCTCTTCCCAGCACCTTAGTTTTTCCCCCCCAGGGCACCTGGTTTCTGTGATTCCATCTGTTTCTCTCTGAGGCCACAATCTTGCCCCTCAGAGCATACCTCCCTCCAAACCCTGCTACAAGCAGCTGCAGCGTTACAGGGGCATTCAACTGAGAGAACACTCTCGGTCCCAAGAGTGACATACGTTTAACTGGTGCTAAAAAAAACAAAAAAAAACACAAAAACCCAACCTTACAAAGCCAAAATTTCTCCTTCCAAATCTGACTCTTCATCAAGTTCTTTTCCATCTAAGACCACCCAAGACGTTTATTTTAACCAGATGGATCCACTGGGTTTCAGCCAAATTCCCCACTTCCTAAGATAAGGAAAGCTTTGGGTGAAAGGAAGAAAGGGAACCAGTCTCAGTGCCATGAATGCCTTCTAGGCAAGGACCTTCCACGCTGCCAGCTTGGCTTTGTCTGCTCCTAGAAGGCTAAGGGGCTTCCCTGATAGCTTAGCAGGTTAAGAATCCTATAATGCAGGAGACCCGGGTTCCATCCCTGGGCTGGGAAGATCCTCTGGAGAAGG TCONS_00043649 TCONS_00043652 TCONS_00043653 TCONS_00043650 TCONS_00043651 TCONS_00043654 . 3' 226 TCONS_00043649 TCONS_00043652 TCONS_00043653 TCONS_00043650 TCONS_00043651 TCONS_00043654 . 3' 2403 EMBV3_32275 CCAACGTATTTCTTGAGGTGGGGATACAAAAGCAGACCGCTACCTACTGGTGTAAGAATC Gene BVT0102_064337 + 0 NULL GK000020.2:11409886-11745971 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115959 1 XLOC_070128 NonCoding TCONS_00115959 XLOC_070128 NonCoding NonCoding - 20:11422540-11422768 - TSS86427 228 1 0 0 0 4.05878062324974e-05 0 0 0 0 0 0.000346058528227383 0 0 0 0 0 0 0.000231680587116572 0 0 0 0 0 0 0 0 0 0 0 0 6.38765238266737e-05 0 0 noncoding TTCCAACGTATTTCTTGAGGTGGAGATACAAAAGCAGACCGCTACCTACTGGTGTAAGAATCCACTTCATCTAAAAGTAAATATGAAGTTTACCAAGCTACATCATTCCCATGCATCCAGTGAAATGAAGGACCTCATACATTGAGCTTTATAAACGAAAGGAGGGGCCTCACCCTGTGACAGAATAATTTTATCCAATCCAATAAACTGAGATATAACTGCTATGAC TCONS_00114522 . 5' 307 TCONS_00114522 . 5' 307 EMBV3_30856 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42399 ATGCTACCAGCAATAAACAGTGATGGAGAGAGGCTGGGACATGGCTCCCAACTGGACTCT Gene BVV0102_072006 + 0 NULL GK000007.2:40489028-40573897 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212934 1 XLOC_130290 Coding TCONS_00212934 XLOC_130290 Coding Coding B4GALT7 7:40482337-40491185 j TSS159632 1673 1 TCONS_00212934_3 327 0.0932456664674238 6 0.811574545043518 0.00029669123538255 3.71734779541332e-08 8.88670113443046e-09 1.26927859978258e-05 9.04640948194177e-05 1.92428703450356e-05 0.00025446197093999 1.5543149185416e-05 3.77738001022641e-14 0.000250344770867895 0.000534246470421715 1.92355998993905e-05 1.78522681974697e-06 7.23244765109517e-05 5.76127741187454e-10 0.00224330886375393 0.00205419687524564 0.00161031171641339 0.000109770626730412 9.93387383362501e-05 3.71538013765074e-10 0.00120273715902752 0.00129180980783106 0.00216898492996403 3.82984688390275e-11 0.000191142783779179 4.01094908410958e-09 0.000825512252137379 0.000443965640080866 0.000384524579910723 NM_001075321.1 B4GALT7 Bos taurus xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) (B4GALT7), mRNA. 0.0 1278 100.00 0.422594142259414 NM_007255.2 B4GALT7 Homo sapiens xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (B4GALT7), mRNA. 0.0 1640 81.88 0.968320382546324 TCONS_00212934_3 sp|Q9UBV7|B4GT7_HUMAN B4GT7_HUMAN Beta-1,4-galactosyltransferase 7; 0.0 598 92.97 0.996941896024465 3 coding 0 0 0 0 -0.0979581641263432 0.519751632102466 0.0177246383141193 0.698812986114235 CGGGGCGGACGGGCTTAGGCGGGGCGGGAGGCGGAGGCGCCGCGTAGGCCAGGGAGGCCGGGCTGGCCCGGCTTGGGAGCTCTGTACCCATGTGCCGCCGCCTCCCCCAACGATGTTCCCCTCCCGGAGGAAAGCGGCGCAACTGCCCTGGGAGGACGGCAGGTCCAGGTTGATTCCCAGTGGCCTCCCCCGGAAATGTTCTGTCTTCCACCTCTTTGTTGCCTGTCTCTTACTGGGCTTCCTCTCCCTGCTATGGCTGCAGCTCAGCTGCTCTGGGGACGTAGCCCGGACAGCCAGGGGACAAGGACAGGAGACCCCAGGCCCATTGCGGGCCTGCCCGCCAGAACCACCTCGTGAGCACTGGGAAGAAGATGAGTCATGGGGCCCCCACCGCCTGGCAGTGTTGGTGCCCTTTCGAGAACGCTTTGAGGAGCTCCTGGTCTTTGTGCCCCACATGCACCGCTTCCTGAGCAAGAAGAAGATCCAGCACCACATCTATGTGCTCAACCAGGTGGATCATTTCAGGTTCAACCGGGCAGCGCTCATCAACGCGGGCTTCCTGGAAAGCGGCAACAGCACAGACTACATTGCCATGCACGACGTGGACCTGCTCCCACTCAATGAGGAGCTGGACTATGGCTTCCCAGAGGCTGGGCCCTTCCACGTGGCCTCCCCAGAGCTCCACCCGCTCTACCACTACAAGACCTACGTTGGTGGCATCCTGCTGCTTTCCAAGCAGCACTACCAGCTGTGCAACGGGATGTCCAACCGCTTCTGGGGCTGGGGCCGAGAAGATGACGAGTTCTACCGGCGCATCAAAGGAGCTGGGCTCCAGCTTTTCCGCCCTTCGGGTATCACAACTGGGTACAAGACATTCCGCCACCTGCACGACCCAGCCTGGAGGAAGAGAGACCAGAAGCGCATCGCGGCTCAAAAACAGGAGCAGTTCAAGGTGGACCGGGAGGGAGGCCTGAGCACTGTGAAGTACCGTGTGGATTCCCGTACAGCCCTGTCTGTGGGCGGGGCCCCCTGCACTGTGCTCAACATCCTGCTGGACTGTGACAAGGCCGCCACCCCATGGTGCACATTCAGCTGAAGGGGCTGGACAGTGAGGGAGCTTGTGCCTATCGGCCACACTGCTACTCAAGCCCAGGCCCAGCTCCAGTAGGACATGGAGTGGCCTGAAGCAGTGGCCAGCCAGCCACATGTTTGCAGCAACCTGGCTCCCAAAGGCAGGTTTGAGCCAGGACAGGACACACACAGGGTGCCTGGGATGCTACCAGCAATAAACAGTGATGGAGAGAGGCTGGGACATGGCTCCCAACTGGACTCTCCACCCTGCCTTACTGCTTGCCCTGCCCTGCCCTGCCCTCCTTTGTATGCTGAGATCTGCAAGTTCCTCCCTTTGGACTGCCTCATGCAGAGATACAGTTTAGAAGCCAGGCCACTGGTGTGGGTGGCCAGGGCCATCAGGAGGGTTAAAACTGCAGAGAGCAGGGTGCAAGCCCTACAAAGGGAGCAGCTGAGACCAGCTCTGGCTGGTTGTCACCATGTAGGAATGTGGGCCTAGTGTTGCCAGATCTGATTTTTCAAAAGAAACTAGAATTCTGGATTCTTGAGTGAAATTGGTTAATTTTTTTTAATTGGTTAATTTTTAAATGATAGCAACTAAT EMBV3_30391 TGCACGAATTGACAGAAAAGGATTCTGTGAAGGTGATGAGATTAACATCCATGCTGATTT Variant GeneID:506790|TXNIP:NM_001101875:59_cdna 190^322 3 EMBV3_23643 GeneID:506790 3 GENE TXNIP MGC154995 thioredoxin interacting protein EMBV3_27467 GAAGGTTGATTCCTCCAGCTCCATTCTTCTTTCCAAAGACTGCTTTGGCTATTCGGAGTC Gene BVT0102_385509 - 1 EMBV3_10818 GK000018.2:58335931-58376496 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00197294 TCONS_00035007 TCONS_00252174 TCONS_00035013 TCONS_00227432 TCONS_00152680 TCONS_00131601 TCONS_00035014 6 XLOC_118956 XLOC_020806 XLOC_155115 XLOC_138244 XLOC_092445 XLOC_080306 Coding TCONS_00035013 XLOC_020806 Coding Coding ZAR1L 12:28692571-28708818 j TSS25730 4513 4 TCONS_00035013_5 145 0.948371371593175 4 0.7224547580943 0.00408201833907709 0.00632667083944759 0.00260884475402462 0.00226203780268112 0.00285378061744426 0.00187175463783617 0.00216536865533195 0.00283683691530989 0.00585936717075475 0.000477961400202149 0.000280324421216191 0.000427888502702365 0.000922811839832132 0.00464580267728802 0.00409517893538649 4.38525033364197e-05 0 0.000557322748975963 0.00203512386315286 0.00365956450087724 0.00111649903499415 5.83714587169214e-05 0.000156903005977779 3.1592781550722e-43 0.00410014652370664 0.00335727006054721 0.00280360174409692 1.09238743726779e-13 6.37604945890575e-05 0.00020013109097849 XM_005213678.1 ZAR1L PREDICTED: Bos taurus zygote arrest 1-like (ZAR1L), transcript 0.0 1025 100.00 0.125637048526479 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 760 68.63 0.483935298027919 TCONS_00035013_17 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-27 108 41.13 0.796610169491525 1 noncoding CTGACCTTGAGAATAGCTATGAGTGAGTTTTTAGAACCCAAATATGGCTATTTTCACTGTAAAGATTGTAAGACCAGATGGGAGAGTGCTTATGTGTGGTGCATCTCTGGAACTAATAAGGTTTATTTCAAACAACTCTGTTGCAAATGCCAAAAGAGTTTTAACCCTTATCGAGTGGAAGCAATCCAGTGCCAGAACACAGGCAAAAGTCACCTGTAACAAGAAATCAGCACAAACCACTCAATCAATCTTTCCCTCCAAGGACAAAAACCAAATGGAAGAAAGAAACAACCCTAAAGTGTGGGAAAAGACCTCAAGTGGAGCATGTTAGAAAAAAATGATGAAAAGACAGAGAAATACAGCACAAATGAAAGAATAAGGTAGAAACACACAAGACCAAATAAACGAAGATGAAATAAGCAATCTACTTGAAAGAGAATTCAGAATAATGATAGTAAAGATGCTTCAAAGACTTGAAAATACAATAGAGAAAATGCAAGAAACATTTAACACAGTTAATAGAATCACCAAGGACATACAAGAAATAAAGAATAAGCAAACACAGATGAATAGCACAATTACTGAAATTAAGAAATACTCTAGAAGGAATCAATAGCAGAATAACTGAGGCAGAGGAATGGATAAGTGAGCTAGAGGATGGAATGGTGCAAATAACTGCTGAAGAGCAGAACAAAGGAAAAAGAATGAAAAGAATTGAGGATAGCCTCAGAGACCTTTAGAACAATATTAAATGCATCAACATTCAAGTTATAGGGATCCCAGAGGAAGGAAAAACAAAGTCACTGAGAAAATTTTTGAAGAAAATAAGTTGAAAACTTCCCCTACATGGGAAAGGAAACAGTTAATCAAGTCCAAGAAATACAGAGTCCCTTACAGGATAAACACAAGGAGAAATACATCAAGACACATATTCATCAAGCTAACAGAGATTAAGCACAAAAAAAGAATATTAAAAGAAGCAAGGGAAAAGCAACAGGAAACATACAAGGGAAAGCCCATACAGTTAACAGTGAATCTTTCAGCAAAAACTTTACAGGCCAGAAGGGAATGGCAGGATATATTTAAAATACTGAAAGAGAAAACTCTACAACCAAGATTACCATACCTGGCAAAGATCTCAATCAGAATTGATAGAGAAGTCAAAGTTTTACAGACAAGCAGAAGTTAAGAGAATTTAGCACCACCAAACCAGCCTTGCAACAAATACTAAAGGGACTTATATAGCCAGTAAACACAAGAGAAAGGAAAGACCTACAAATATAAACCCAAAACAATCAAGAAAATACCAATAGAAACGTGTGTCAATAATTACCTTAAATGTAAACAAATTAAATGCACCAACCAAAAGATAAAGGATGACTGAACGAATTCAAAAGCAAGACCCATATATATGCTGCCTACAAGAGACCCACTTCAGACCTAGAGACACATACAGACTAGAAGGAAAAGGATGGAAAAAGATATTCCTTGCAAATGGAAACTAAAAGAAAGCCAGAGTGGCAATCCTTATTTCAGACAAAATAGAGTTTAAAGAATATTATAAGAGACCAGGAGGGACACTACATAATGATCAAGGGGTCAATCCAAGAAAAAGACGTAACAGTTGTAAATATTTATGCACCCAACGTTGGAGCACCTCAATACATAAGGCAAACACTGACAGGCATAAGAGGGGAAATTGACAGAAACACAATAATAGTAAGGGTCTTTAACACCCCATTTATACCAGTGACAGATCATCAAAACAGAGAATCAATAAGGAAACACAAACCTAAAATGAAACATTAGATCAAATGGATCTAATTGATATCTCAGGACTTTCCATCCAAATGCAGAAAATACATTTTTTTCTAAAGTGCACATGAAACACTTTTCAGGATAGACCACATCTTGGGCCACAAACCAAGCCTCAGTAAATTTAAGAAAACTGAAATCATATCAAGTATCTTCTCTGACCACAACACTATGAGACTAGATACCAACTACAGGAAAAAAACTGCAAAAAAAAAAAACAACACGCAAACTCATGGAGATTAAATAGTACGTTACTAAATAACAAAGAAGTTGTTAAAGAATAAGAAAGGAAATCAAAAGATTCCTAGAAACAAATGAAAATGAAAACACAGCAACCCAAAACCTATGGGATTCAGCAAAAGCGGTTCTAAGAGGGAAGTTTATAGCAATACAATCATACCTCAAGAAGCAAGAAAAGCACTGAACAGACAACCTAACTCTATATCTAAAGCAGCTGGAAAAAGAAGAACAAAAAAACCCCCAAAGTCAGCAGAAGGAAAGAAATCATAAAGATCAGAGCAGAAATAATGAAAAGGAAATGAAAGAAACAATAGCAAAGATTAATAAAACTAAAACTTTGTTTTTTGAGAAGAAGATAAACAAAATTGACAAACCACTAGCCAGACTCATCAAGAAAAGGAGAAAGAACAAATCAACAAAATTAGAAATGAAAAATAAATTGCAACAGACAATACAGAAATACAAAGGATCGTAAGAGAATATTATGAGCAACTATATGCTAATAAAATGGACAACCTAGAGGAAACGGACAGATTCTTAGAAAAGTTCAACCTCCCAAGACTGAACCAGTAAGAAATAGAAATTATGAACAACTCAATTACAAACACTAAAATTGAAACTGTGATCAAAAATCTCCCCAAAAACAAAAGCCCAGGGTCAGATGGCTTCACAGGAATTATATCAAAGATTTAGAGAGGAGCTAATGCCTATTTTTCTGAAACTATTCCATAAAGTTGCAGAGAAAGGAACACTTCCAAACTCATTCTATGAGGCCACAATCACCCTGATACCAAAATCTGGCAAAGACAACACATAAAAAGAAAATTATATACCAATATCACTGATGAACATAGATGAAAAAATCCTCAACAAAATTCTAGCAAACAGAATTCAACACGTTAAAAAGCTCATACACAATGATCAAGTTGGGTTTATTCCAGGGATGCAAGGATTCTTTAATATATGCAAATCAATCAATGTGATACACCATATCAACAAATTGAAACATAAAAGCCATATGATCATCTCAAAAGGCAGAAAAAGCCTTTTGACAAATTCAGCACACATTTATGATGAAAATGCTTCAAAAAATGGGCATAGAAGGAACCTACTTCAACATAGTAAAGGCCATATATGATAAGCCCTTGGCAAACATTATTCACAATGGTGAAAAACTAAAAACATTCCCTCTAAAATCAGGAAAAGACAAGGGTGTCCACTCTCACCACTGTTATTCAACATATTTCTGGAAGTCCTAGCTACAGCAATTAGAGAAGAAAAAGAAATAAAAGGAATCCAGATCGGAAAAGAAGTTAAACTCACTGTTTGCAGATGACATGATACTATACCTAGAAAACCTTTCAAAAGAAGCTATCAGAAAATTACTAGAGCTAGTCAGTGAATTCAGCAAAGTCATGGGATACAAAGTCAATACACAGAAATCACTTGCATTTCCTATAGTCAGATCAGTTGCTGAGTTGTGTCTGACTCTTTGCATCCCCACAGACTGCAGCATGCCAGACTTCCTTGTCCATCACCAGCACTTGGAGCTTGCTCAAACTCAAGTCGGTGATGCCATACAACCATCTCATCCTCTGTCATTCCTATATACTAACAATGAAAAATCAGAGAAATTAAGGAATCAGTCCCAGTCACCACTGCATCAAAAAAGAATAAAATATCTAGGAATAAACCTACCTAATGAGACAAAATACTGTATATGGAAAATTATAAGACACTGATGAAAGAAATCAAAGACAGTGTAAACAGGTGGAGAGCTATTTCATGTTCCTGTGTAGAAAGAATCAATATTGGGAAAATGACTATTCTACCAAAGGCAATCTACAGATTCATGCAATGCCTATCAAACTACCAATCTTTTGCAGAACTAGAACAAAAAATTTCACAATTCATATGGAAACACAAAAGACTCCAAATAGTCAAAGCAGTCTTGAGAAAGAAGAATGGAGCTGGAGGAATCAACCTTCCTGATTTCAGATTATACTACAAAGCTGCAGTCATCAAGACAGTATGCTACTAGCACAGAAACAGAATAAAGACCAGTGGAACAAAATAGAAAACCAAGAGAGAAAACCACACACTTATGGGTACTGTTTTTGACAAAGGAGGCAAGAATATACAATGGGGCAAAGATAGACTCTTCGATAAGAGGTGTTGGGAAAACTGGACAGCTACATGGAAAAGAATGGAATTAGAACACTTTCTAACACCGTACACAGACATAAACTCAAAATGGATTAAAGACCTAAATGTAAGACCAGAAACTATAAAACTCTTAGAGGAAAGCATAGGCAGAACACTTGAACTTAAAAGCTTTTGCACAGCAAAGGAAACTACAAACAAGGTGAAAAGACAGCCCTTAGAATGGGAGAAAATAATAGCAAATGAAACTGACACTTTCCAAAATATACAAGCAGCTCATACAACTCAATACCAG EMBV3_08608 CTGGTGGTGCCCTGTCCTTACAAAAGCAGATGGAACATGCTAACCAGCAGACTGGCTTCT Gene GeneID:518494|GPS2:NM_001075774:114_cdna Constitutive 0 NULL GeneID:518494 19 GENE GPS2 MGC133909 G protein pathway suppressor 2 EMBV3_13045 CCTCTTCGACTCATTGAGCCAGATGCTGAGGGTGATCCTAGAGAGCGATCCCCAGCAAGT Variant GeneID:281707|COPZ1:NM_174282:4_cdna 333^410 1 EMBV3_07883 GeneID:281707 5 GENE COPZ1 NULL coatomer protein complex, subunit zeta 1 EMBV3_38488 CTTTCTTGGCAATGGATACAACCCCCACAGTCCACAGATTCCCAGAGCACCCAGGTCTAA Gene GeneID:512018|BOC:XM_002684774:291_cdna UTR3_Alt 2 NULL GeneID:512018 1 GENE BOC NULL Boc homolog (mouse) EMBV3_37469 CTCAGGTTATTAAAGCTGCCCCAGCCACGAAAACAAAATACTGGCCAGATCACTCATGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34468 TCGACGGAAGGCAGCGCCGCGGATCGAATGACCTGGAGGCAGAAGCCAGCCTTCCGGAAA Variant GeneID:506421|NOP16:NM_001014856:87_cdna 143^321 2 EMBV3_27071 GeneID:506421 7 GENE NOP16 HSPC111 NOP16 nucleolar protein homolog (yeast) EMBV3_07815 AGGTGTCCCTGAGTCACGTGCGTCCCGAGGACTGTGAGAAGGGGGGTCTCAAGAATATCA Gene GeneID:615467|LRRC32:XM_002693482:106_cdna Constitutive 0 NULL GeneID:615467 15 GENE LRRC32 NULL leucine rich repeat containing 32 EMBV3_10594 TAATAATGTCTGGGTGTCCTGTTTGCTTTGTTCTGGAGTTGGGGCTGCAGATTGGGGGTC Gene GeneID:524491|CUX2:XM_002694498:376_cdna UTR3_Alt 2 NULL GeneID:524491 17 GENE CUX2 NULL cut-like homeobox 2 EMBV3_29833 GGAGCAACTCAAAGATCTAGAAAAATGGCAGAATAACCTGTTCCCGCTCCGTCAGCGTGG Gene GeneID:100336834|LOC100336834:XM_002697296:114_cdna Constitutive 0 NULL GeneID:100336834 23 GENE LOC100336834 NULL hCG1994130-like EMBV3_22639 AGAGTGTGTCTTGATGCACCCAGTATTGCAGTTAGAGTAGCAGGTTTCGAGTAACAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29765 AGACCTTCGGTGCTCTTAGCCACTTGCCCCCATACAGAATGAGAACGTCAGAAGGATACT Gene GeneID:515971|ORAI3:XM_002698068:48_cdna Constitutive 0 NULL GeneID:515971 25 GENE ORAI3 NULL ORAI calcium release-activated calcium modulator 3 EMBV3_31602 AAGTCTCATGACTGGTCTAATCTCTGCACTTGCCAACTTTGGTGGCTGCCCGTGTGCCTT Gene GeneID:513538|NPTX1:XM_002696122:227_cdna Constitutive 0 NULL GeneID:513538 19 GENE NPTX1 NULL neuronal pentraxin I EMBV3_21465 AGCTGCTACTTTGGCAGTTCAAGTACGAGCCACTGAGCTCCTCGGGTACAGGCTCCAGTA Gene BVV0102_180264 + 0 NULL GK000001.2:126704344-126870790 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17230 ACCACCTTCTCCTAGCACACCTCTCTCTCACACACACACTTGATAAAGGCAGGAGATTGC Gene BVV0102_120688 + 0 NULL GK000009.2:89603964-89612880 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30315 CAAGCTCCTCATCAGCCTGTCCGAGGAGCGCATCAGTGCGCACCACGTCCCAAACATGGT Gene GeneID:280718|AMH:NM_173890:4_cdna Constitutive 0 NULL GeneID:280718 7 GENE AMH NULL anti-Mullerian hormone EMBV3_29028 CACACGCACATCAGTGTTCATTTTAGCGCCGTTTATAATGGCCAGGACACGGAAACAACC Gene BVV0102_196254 - 1 EMBV3_39438 GK000029.2:17802379-17828867 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03306 CTCTTATCCACCAGGCGGAGCTTGAGTCTGGATCGCTGGAGAAAACCACAGGGCATCATT Gene BVT0102_129530 + 0 NULL GK000002.2:22294721-22359138 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101882 TCONS_00101883 TCONS_00101884 TCONS_00101887 1 XLOC_061775 Coding TCONS_00101884 XLOC_061775 Coding Coding GPR155 2:22355231-22360744 j TSS76022 915 1 TCONS_00101884_4 158 4 0.834724238026125 0.00479110724539287 0.00399821712166046 0.00437458309439403 0.00264123294380445 0.000481267231126628 7.75004054288245e-05 0.00136688754759018 0.00301822778332539 0.000783343810662526 0.000915798317340597 0.000311456607470209 0.000398221755372294 0.000475653963035015 0.00147978798128819 0.00103651418484508 0.000891513554989079 0.0130324850195975 9.93956322080995e-200 0.0025799731813181 0.00134086346671077 0.00110522144864654 8.22153334952646e-05 7.65503187323392e-28 0.00111570579158454 0.00312712268502151 0.00312245382603978 0.00220242038199088 0.000499694546536019 3.43039631506141e-24 1.20497322676127e-229 XM_005197439.1 GPR155 PREDICTED: Bos taurus G protein-coupled receptor 155 (GPR155), 0.0 1543 100.00 0.933333333333333 NM_001267050.1 GPR155 Homo sapiens G protein-coupled receptor 155 (GPR155), transcript 0.0 715 91.62 0.546448087431694 TCONS_00101884_4 sp|Q7Z3F1|GP155_HUMAN GP155_HUMAN Integral membrane protein GPR155; 2e-92 290 94.04 0.949367088607595 1 noncoding ACTTTCTCGGAACGTGACTGAGCTGCTGTAGCCTGACCCCGGCAGCCGGCAGCTCTCTGCTGGGAGGGCTGTGGGTGGGAAATGACGGTGATTTCCTCCCTGCTTGGTCCACCTCGAGCATCGACTCCCTTCTCCCGCGGCCCCAGGGCTGCAGACGTAGCAGACCTTCTGCAGGCTGGAAAGGACCTTCCTGTCCATTGTGACTCCTTGATGTAGCCCTGAGAACTTCTGAAGTTTCTGGATAATTTGGCTGCAGTGGACATTCAGCAGAGACTCTGTGGGCCCCATGTTCTTATCCACCAGGCGGAGCTTGAGTCTGGATCACTGGAGAAAACCACAGGGCATCATTGCAGCTGTGAGCTCTGGTTGGAGTTGGAAGGTGAAAGAAAATGAATTCTTTTTCCGATATACCTGCCAAGAACTTAACCTTTGCAGTCAATATGACCAAGACTTTGTCTTCACCAGTTACACATGGATTTAATTCCACTAATGACCCACCTTCAATGTCAATAACAAGGCTTTTTCCAGCCTTACTAGAATGCTTTGGCATAGTCCTTTGTGGCTACATAGCAGGAAGGGCCAATGTTATAACATCAACACAAGCAAAAGGACTGGGAAATTTTGTCTCCAGATTTGCACTTCCAGCTTTACTATTCAAAAACATGGTCGTACTTAATTTTTCTAATGTGGATTGGTCTTTTCTATACAGTATCTTAATTGCCAAAGCTTCTGTATTTTTCGTTGTATGTATATTAACGTTACTGGTTGCCAGTCCCGATAGTCGATTTAGCAAAGCCGGACTATTTCCTATTTTTGCTACACAAAGTAATGACTTTGCATTGGGATATCCTATAGGAGCCTGTTAGCACCAATGACCATGCTAGCTGCTGGGAATACCCTTGTGACCAAAGTTCT EMBV3_01839 TCTGAGAGAGATGGCAAGGTGCTAGACTAAATCACTGACGCTGGAGATGGAGAGGAAAGG Gene BVT0102_270533 + 1 EMBV3_11058 GK000005.2:56683672-56697176 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199519 1 XLOC_121172 NonCoding TCONS_00199519 XLOC_121172 NonCoding NonCoding - 5:56684181-56687484 - TSS149087 3303 3 TCONS_00199519_1 56 0.642143505903724 1 0 0.00081422646383997 0.000465458753522818 0.00064999359247944 0.000354850262507654 0.000570997048546016 0.000159738518780776 0.000595000574610322 0.000668830554521847 0.000435951720218177 1.24568367758572e-05 1.69800369507705e-05 3.46418075548373e-05 4.69093245099991e-05 1.70898877662548e-05 2.67367887926316e-05 0.000151928742186523 0.000120634140683835 0.000243084831234669 0.000388614995790201 0.000744617173594332 9.55842892638773e-05 0.000117574353189453 0.000149984482388462 2.03023130480974e-05 0.000259056967031944 0.000641870522489196 0.000367194933897369 8.86944749357344e-05 3.30695199965517e-05 0.000271215487933625 XM_595033.6 IPCEF1 PREDICTED: Bos taurus interaction protein for cytohesin exchange factors 1 (IPCEF1), mRNA. 3e-65 255 87.26 0.0629730547986679 0 noncoding 0 0 0 0 0.000191552849140908 0.998643690157563 0.000191552849140908 0.998643690157563 TTTAAAATTCAGAGAAGGAGGTAACTGCTGGGGAAGGTTCAAGCTTTCAAAACAGGGATTTTAAAAAAGTGAAAATGAAGCCAAGAAACTGGCAAGAGAAGAAATTTCATTCTCAGAAAGAAAACTCAAGGCCACCTCTGGTGCAACAGTCATCCTCTCAAACACTTCCACCACACACTCCCCTGGCTGACCTAAAGAGGTCAGTATCCACAGTAATACATCTCGTTGCTACTATGTACCCTTGATAGTGTGTGGAGAAAATGGTATTTCTGTGGTTTTCCTCCTCAAAACTCATAAAACTAAGATAAACATTTATTAATAGGTCTCTCAGTTGGGTCGGACTCTTTGCCACGCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATTTTCCAGACCCAGAGATGGAACCTGGGTCTCCTGCATTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCACTTTAAAAATTCAGATAAAGAGGTAAACTAGGGACTTCTCTTGTGGTCCAGTGGTTATGACTCTCCACTTCCACTGCCAAAGGTGTAGGTTCAGTCCCTGGTGGGGGAACCCATAAGATCCCACAAGCCATGTGTGGTACAGAGAAACAAAGAGGCAACCTACAAAATACCTGATCAATACTCCTCATAGTCATCACAAACAGGGCAACTCTGAGAAACTAACAGCCAAGAGGAGCCTAATAAAATATGGAAACCAAATGTAATATGGTATCATGGATGGGATCCTAAAATAGAAAAAAATTAGGTAAAAACTAAGGAAATCTGAGTGAATGATAGGCTTTAGTTAGTGTTATCAATGCTGGTTCATTAATGGTGGTAAACACACAGTACTAATGTTAAGATCATAACAGTAGAAACTGGATGGGGAGTACAGGACAACTCTGTACTATCTTCTCAATTTTTCTGTAAGTCTAAAACTTTTAAAAAATAATTTATACACCTACACCCCTCAACACACAAACACACTTCATTTTCTACCAGGTCCCAAATTCTCAGCATTCAGAACTTGCTCTTTGGTTTTGAACAAAGGCCAGAGAACAGGGCAACTAATTCCAGAGGATCATTTACTTTTTTTTTTTTTCAATCGCCCACCAGGGATTGAACCCAGATCTGGCAGTAAAAGCAATGAGTGCTAACCACTGGACCTCCAGAGAATTCCCACCACTGACTGTTAAAATATGTAAATGCAGTGTACAGTAATAAAACTGGTTGTCCATAAACACATGAAACCTTATCATCTAAATGAGTTCCGTCACTTCCAGGTACTCAAGAAGCTTTTAGCCTTGTTTTAATAATATGAACACTGCTCAAAACACTTTGAGAATCATCTTCAGAGTCTATAGCACACACTTCAATGAATATTCATTATCTGCAGGTGGATCTGATTTATGCAAATAGCCAAAAAAACTCAGGCCAACGCTGATGAGTAAATGGGGCAGGAAATCTGGATCATAAATGTGTTTCAGAATTTTTTTGGATTTTAAAATGTAATATGGTGCATATGCAATAAATAAGACAGCAATCTCAGTGGGGTCTGGGACAGTACCTCATAAACGAATGTTTCTGCAATGAGAGATGAATATTCACATTGGTATAAATGAAAGTGGCATAAATGAAACTATAAATAACCTTATGTATTAATAAGCTATTTCACTCTCCTCTTTCACTTTCAAGAGGCTCCTTAGTTCCTCTTTGATTTCTGCCATAAGGGTGGTATCATCTGCTTATCTGAGGTTATTGATATTTCTCCCTGTAATCTTGATTCCAGCTTGTGCCTCATTCAGTCCAGCATTTCACATGATGTACTCCACATGTAAATTAAATAAGCAAGATGACAATATACAGCCTTGATAAGCTAGGAGGTCCGCCACAAAGTAAGTTCAAGTCAGATTAGGTTTCGTAGTCAAAAGAGATATGAAAATTTTTGGTTTTCATAACTTTTTTTCATAACTTTCTTAACTTAGGTAAAAGACTGCAGATGGTGACTATCTGATGATGATGCTCCATTCTATCCAGTCACCCAAGCTAGAAGCCTGAGAGTTACTCTAAACTCTTCTCTTCCCCCAACCCTTTAGCCAGTCATCAAGTTCTATTCATATTACCCGATGATCTTTTTTTAGTTTTTTTTTTGAAAAATAATTACCTATTTATTTTTGACTTTTCACTATGCTGGGTCTTCACTGCTGTATGGACTTTTCTCCAGTTGCAGTGAACAGGAGATACGCTCTAGTTGCTGTGTGTAGGCTTCTTGCAGTGGCTTCTCTTGTAAAGCACGGCCTCTAGGCACGGGGGCTTCAGTAGTTGTGGCTCCTGGGCTCTTCAACACAGGCTCAATAGTTGCAGCACAAGGTTAGTTGCCCTGCAGCACGTGGATCAGTGATAGAACCCATGGTTCCTGCATTGGCAGGTGGATTCTCTACCTCTGAGCCACTAGGGAAGCCCTGATGACTATCTTTTAAATCTGTCCTTTCCTCTCCATCTCCAGCGTCAGTGATTTAGTCTAGCACCTTGCCATCTCTCTCAGAGCACTTTTGTTTCCTTCAAGTTGGCCTCTCTGCACTTTTAACTTCCATAAAACCTTTTCTCCATACCACTCCTAAATACAGATCTGACCATGTCACTCCCATGTTACAGTCTTTATGGTTCCATGGCATCTCCTGTGATACTTTATGGCCCGTAGTCCTAATATCACCTAAATACAGATGTATAGAAACAAATTTTGGGACTTTCCTGGTGGTCTAGTGGTTAAGAATCCACCTTGCAATACCGGGGATGCAGGTTTGATGCCTGGTTGAGGAACTAAGATCCTACATGCCACAGAGCAGCTTAGCCCATAAGCCACAACTAGAGAGTTCATGCCCCAGAATGAAAGATCCCCTATGATGCAATGAAGATCCCGAGTGCTGCAACCAAGACCCAACACAGCCAAATAAATAAAAACACAAACAAGGCCATCCTCTGTGCTCACAGAGCACCTCATATGCTTATCACTTAAATAAAAGAAACAAATTTTAACTACAACAGTGCCACTCAAAGTTTGTTGTTATTTTTGTTGTTCAGTCGCTCAGTCATATCCAACTCTTTGTGACCCCCATGAACTGCAGCACGCCAGGCTTCCCTGTCCTTCAGCATGTCCTGGAGCTTGTTCAAATTCATGACCATTGAGTCGGTGATGCCATCCAACCATCTTGTCCAAAGTTTGTTACCACTCTGCAATGAAACA TCONS_00191949 TCONS_00191950 . 5' 395 TCONS_00191949 TCONS_00191950 . 5' 395 EMBV3_42578 GACTACCACACTATCAAGATGCTGACTATTTCCATTAACCCAGAAAGACTCCTCGGGCCC Gene GeneID:511669|ZNF696:XM_002692560:205_cdna Constitutive 0 NULL GeneID:511669 14 GENE ZNF696 NULL zinc finger protein 696 EMBV3_43709 TGAGTGACAGCAATGTGCCGCTGCTCACACGGATCAAGAGGGACCAAAGTTTCACTACCT Gene GeneID:505707|LOC505707:XM_002685840:94_cdna Constitutive 0 NULL GeneID:505707 3 GENE LOC505707 NULL similar to Protein FAM78B EMBV3_42563 TCAGAGCTGCGAGGTTTCCTGTAGTTGTGCCTGACAATCCATGCCGGGGCTGAGGCTGGA Gene BVT0102_082720 + 0 NULL GK000008.2:1073250-1172020 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04214 AAGGGTTGGGTCCGATGATATTAGGGACACACCTGAAGATGAGCCAGAGACAGAGAGACC Gene BVV0101_069854 - 1 EMBV3_42709 GK000020.2:3868636-3892886 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115469 1 XLOC_069639 NonCoding TCONS_00115469 XLOC_069639 NonCoding NonCoding STK10 20:3879336-3880486 i TSS85937 1150 2 TCONS_00115469_1 64 0.175652173913043 1 0 0.000106479369592763 0 5.63287387507063e-05 0.000158862519743982 0 3.11048525563357e-05 0 0 8.91927683504387e-05 0 0 0 0 0 0 0 0 0 0.000187067783183034 0.00035019187625732 0.00317827384623279 0 0 0.000276981064762349 3.61484619781042e-05 0.000343084383995109 0.000127372835546226 0 0 0 XM_590179.5 DENND2A PREDICTED: Bos taurus DENN/MADD domain containing 2A (DENND2A), 5e-18 96.9 100.00 0.0452173913043478 XM_005248399.1 CWC27 PREDICTED: Homo sapiens CWC27 spliceosome-associated protein homolog (S. cerevisiae) (CWC27), transcript variant X1, mRNA. 9e-15 86.0 75.81 0.106086956521739 0 noncoding 0 0 0 0 0.0024560167187177 0.983470371822426 0.0404729586570836 0.492198289706305 GTCTATGGGGTCGCACAGAGTCGGACACAACTGAAGCGACTTAGCAGCAGCAGAGGGAATAGGGAGCTTTGAGAAGGGTAAAGAAAAGATGTGCCAGTGTAGAATGTGCTGGCTGCCCTTGCCTACACGCAGAGCCCTCAGGCAGAGAAGCGCAGCAAGTCAAACAGCTGAGAGCCACGGGTGTGAGTGTCACAGCCTCTCCAACCACAGAACCTTTGCTCCAGTGGGGGTTCCACCCTGTAACAGGAAGTGCCTGCTTAGAAGGGAGGTGGTAACAAAATAGACACGGGGATGGGCCTGGGTGGCCTCAGAATTGCCTCCAGCTGGGTTTCTCAAAACTTAAAGTGCTTAGCGATCACCTGGGGATTTCTTACAACGCAGACCGTACTTGATCAGGTCTAGAGTGGGGCCTCAGACCCTGCATTTCTAATAAGCTCCCAGGTGATACTAATGCCACTCCTTCAGGGACCACAATTTGGTAATTCAGCTCACCACCACTTTCAGGTCAAAAAGAGCAAGTCTTGACCAGGAGGACTGAGAGAAGCCCTATCTGTGGTCCAAGCTCCTAAAAGGGAAGTCCTGGGATCAGAGTGGTCCACAAGCTAAAGGAATCCCATGAAGGTGACGGTGGCTCATGAAGGGGGTGTCCTCCTCGAGAACATGCGGGTTTCTCTAGGAGATAGGGGAAGGGTGGCGTCAAGCCCTAAGTGTTTTTTGGGTCCCCAGCAACACAGAATTTCTTCTCAGGACTAAGAACCAGACAATGCCTACAGCAAACGTGTCTAGAATTAATCAGCTCTGCCCCACCCACCCCTCCACAAAAGCTCTCTGGCCTCCTATTCCTCTAGGGGAAAGGTAACTACAGACTGGGAGACTCCCCAGCAGTGACTCATCCACACGCTCAAATCTGACCCCCGAAGCGCAGGATTCCAGAGGCCTTAACCTCCCGCTCTGCCGGCCCCAGCCTCCATCTCCAAGCCTAACCTCTCACTCCGAAACCCCCTACCCCCACCCCCGGTCTCTCTGTCTCTGGCTCATCTTCAGGTGTGTCCCTAATATCATCGGACCCAACCCTTCCAGACGCAGCCCAGTTGCTCTGTGCCCATCGCCTCGGCACCCTAACAGCATCTGGGTGGACTCCCCTAAAAAG TCONS_00114260 TCONS_00114261 TCONS_00114262 TCONS_00114267 TCONS_00114263 TCONS_00114264 TCONS_00114268 TCONS_00114265 . 3' 333 TCONS_00114260 TCONS_00114261 TCONS_00114262 TCONS_00114267 TCONS_00114263 TCONS_00114264 TCONS_00114268 TCONS_00114265 . 3' 1482 EMBV3_12099 AGGAATTGGTCACCCTTGGTTCTCCTCCTTCTGCCTTAGTGAAGGTTGAAACGAGCTTGG Gene GeneID:616549|FANCB:XM_002700402:81_cdna Constitutive 0 NULL GeneID:616549 X GENE FANCB NULL Fanconi anemia, complementation group B EMBV3_28046 CTGTATAATGTCCCTCAAGTTACGGCAGTGTACCTGTGCCACTGAATTTCCAAAGTGTAC Gene GeneID:618226|SFPQ:XM_002686483:561_cdna Constitutive 0 NULL GeneID:618226 3 GENE SFPQ NULL splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) EMBV3_14143 CTGCAGCTCTGTGCGGAAAGCATAGGGGAGGTGTATATTAAGAGTACGGAGACTGGCCAG Gene GeneID:281160|FGF1:NM_174055:4_cdna UTR3_Alt 2 NULL GeneID:281160 7 GENE FGF1 NULL fibroblast growth factor 1 (acidic) EMBV3_09098 GTCGTGGGACTCCTCCTCAGCACCTTCACTCCTTCTTAGTTTGTGTCTGTGTGGTTCGTT Gene GeneID:280977|ACP1:NM_173978:8_cdna UTR3_Alt 5 NULL GeneID:280977 Un GENE ACP1 MGC128334 acid phosphatase 1, soluble EMBV3_12677 ACTCAGCCAGTGGGCAAATACTTGGTATAAGGCAAGTTGGTCTTTTCATACTGAAATGCG Gene BVT0102_128409 + 0 NULL GK000001.2:143706950-143737581 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005506 1 XLOC_001280 Coding TCONS_00005506 XLOC_001280 Coding Coding ZNF295 1:143735139-143755847 = TSS2726 7208 1 TCONS_00005506_4 847 0.0375971143174251 3 0.652050031390351 0.000663261908881119 0.000481643588719836 0.000388919151682445 0.000213125218269749 0.000289623005816147 0.000137991143384099 0.000411003148172607 0.000430665832187135 0.0004945192062437 0.000188947639124436 3.14413743370722e-05 6.48475063859074e-05 8.71772132141698e-05 0.000170913926959681 0.00017817102197698 0.000743829368506336 0.000119772172287867 0.00151074720141511 0.000416503708615632 0.000318414414747331 0.000211738931998951 0.00020178302701815 0.000336008183110364 0.000527965556766252 0.000808763771715672 0.000408574325817588 0.000224985068325882 5.73005082447186e-05 8.21670490419762e-05 6.97183280390707e-05 XM_005201998.1 ZNF295 PREDICTED: Bos taurus zinc finger protein 295 (ZNF295), transcript 0.0 1.194e+04 100.00 0.918007769145394 XM_005261123.1 ZBTB21 PREDICTED: Homo sapiens zinc finger and BTB domain containing 21 (ZBTB21), transcript variant X3, mRNA. 0.0 3687 72.54 0.931465038845727 TCONS_00005506_4 sp|Q9ULJ3|ZBT21_HUMAN ZN295_HUMAN Zinc finger protein 295; 0.0 727 64.61 0.693034238488784 3 coding 0 0 0 0 0.0591419336143193 0.750254311511565 -0.0125044114607721 0.803908387313562 AAGATGGATGGAATCACAGCGGCAGCGGCGGCTGCGGCGCGCGCGAGCCGAGTGTGAGCGGAAAGGGGCCTGGCGTCTGCCTCGGGGCTGAAGACCGATAAGGCTGAGCATGGAGGGGCTCCTGCACTACATCAACCCAGCACACGCCATCTCTCTCCTCAGCGCCCTCAACGAGGAGCGGCTCAAAGGGCAGCTGTGTGACGCGCTCCTGATCGTGGGTGACCAGAAGTTCCGAGCTCATAAAAACGTCCTGGCTGCCAGCAGTGAATACTTCCAGAGCTTGTTCACCAACAAGGAGAACGAGGCACAGACTGTATTCCAGCTGGACTTCTGTGAGCCAGATGCTTTTGACAATGTGCTGAACTACATCTATTCTTCCTCTCTGTTCGTGGAGAAGAGCAGCCTGGCTGCCGTGCAGGAGCTCGGCTATAGCCTGGGCATCTCCTTCCTGACCAACATCGCCTCCAAGACGCCCCAGGCCCCCTTTCCCACGTGTCCCAACAGAAAGAAGACTTTCACCGAGGACGAGGAGAACAGTTCTCAAAAGAGAAGCGTCATCGTTTGTCAGAGCAGGAACGAAGCCCCCGGGAAAGCCGGGAGTCAGAACACCCCTGAGCTGAGCCACCCTCCCCGGCCCTCCGCCAGCATCGCGGTCAAGGCAAATGCCAGTAAGCCCCCCGGCCCAAAACCCACAGAGCCCCCACACCACGTGGCGCCAGCTGAAAAAAGCTGGCCGAAAGATGGCCCCGCGGTTCTGGCGAGGCCGCCCGAGCTCGCCGGGCCTTTAGAGGAGCCAAGCCGGGGCGGCTTGGCCAAGCGGGCCGTGGCACCACCTTCGAAGCCCCCGCCAGACCGGGCGGCCGTGGACGAAAGGCCAGGCGCCAGCGCCCTGCTCCCCAAAGGCGTGGCCGTGGAGTTGGCGTTGCGGAGCCCGCGGCCGCCTGTCCTGTCCCTGCGGGGCTCTCCCGAGACGCCCTTCCTGCTGAAGGAGGCGGGCCGGGGCAGCGGGCCGGGTGAGGACCGGAACCTGCTGTATTACTCTAGGCTGGGGCTGGTCATCCCAGCCGGGGCGCCGGCGCCCGGGACCCAGGGTGTGGACCGCAGCGGCCCACTCGTCAAGAGCCTCTTGCGCCGGTCGCTGTCCATGGACAGCCAAGTCCCCGTGTACACGCCCACTGCTGAGCTGCAGGCTCCCCCAGGCGCGGGCTCGGGCGATGTGGCCGGCAGTGTGCTCAGCGCCTTCTCTTCTCAGAGGCCGCCCTCCAAGGACGGGGGCGAGACGGTGGCCCCCGACACCCGGACCCCTGCCCCGCAGCCTCACCGCCTCAGGTCCTTCAGCGCTTCTCAGCCGGCTGAGCGGCCGGGGGCGCCCCAGGGGCCGGAGGTGCGGGTCAAGGCCGAGCCGCGCAGCCCCCCGGAGCCATGCGACATCATTCGAGTCACCGTGGGGGATGCCGCGGCCGCCACGAGAGACCTGGCGCTACAGACAGAAGACGACCGGAAAGACCCCAGCAGACTCCCGGCGAAGAGGCGGTTCCAGACCGACAGGAGGCTGCCGGCCAAGCAGCCCAAGGCTGAGAGCCCAGGCTCCCCGGGCTCGGGAGACCCCCGCGAGGAGGGCTCGAGCCCATCTGCCCTCCGGGCCGACTTCCCAGGCTCTGACTTAAACAAAGACGAATTCGAGCAAGGCAACCACGAGCGCCTGTGCCGCACTGCTACGGTGTGCCCCTACTGCAGCCTCAGGTTCTTCTCGCCCGAGCTCAAGCGCGAGCACGAGGGCAAGTGCGAGTTCCGCAAGCTCACGTGCCTGGAGTGCATGCGCACCTTCAAGTCGGCCTTCAGCATCTGGCGGCACCAGGTGGAAGTACACAATCAGAACAGCATGGCCCCGGCCGCCGGCACCTCCCCACCCCGGCCTGACCTCAACGGCGAGGCCACCGGCCCTGCCCGGCCCCTTGTCCCGCCCGAGCCTGGTCGAGCCGACCCCGCGGCCACTGCCGCCAAAGACGACCCCGCGGGGGGCGGCCGCGGCCCTGAGCCTGTGAACTTTGACTCCGAAGACTCCACCTGCCTCCCCGAGGACCTCAGCCTCTCCAAGCCGCTGAAGATCCAGGTCAAAGAGGAGCCGCCGGAGGAGGCCGAGGAGGAGGCGCCCGAAGCCGGCGCGGCCCCCAAGGACCTGTGGCCCTGCGAGAAGTGCGGCAAGACCTTCCCGGCACCTAAGCAGCTGGAGCGGCACCAGGAGCTGCTGTGCTCCGTGAAGCCCTTCATCTGCCACGTCTGCAACAAGGCTTTCCGCACCAACTTCCGGCTCTGGAGCCACTTTCAGTCCCACATGGCCCAGGCCTCTGAGGACCCTGCGCACCGGGATCCTGAGGCTGGCCCGGGCCCCGCCGGCTCCCCGTCGCCGCCCCCGCTGCCCCCACCGCTGCCCAAGATCCAGCCCCTGGAGCCCGACAGCCCCACAGGCCTGCCCGAAACCCCCACTCCCACGGCCGACAAGCTGTTCGCGCCCCGAGAGTCAGACACGCTGTTCTACCACGCGCCCCCCCTCTCCGCCATCACTTTTAAAAGACAGTTCATGTGTAAGCTCTGCCACAGGACATTCAAAACGGCCTTCAGCCTCTGGAGCCACGAGCAGACCCACAACTAAAAGACTTCTCAGCCCTGGAGACAAGCTCCGGTCTCCAGACTTCAGCCCGAATCGTGAACTGTGTCATAAGAAACAAAATATTTTAAAAAAAAGAATAATAAAGGTTGCAAATCATTATGCTTGAATATAAGTTTGAGGTGAACTGATATTAATGAGAAATGTCCTTACTCAACCTAGGAAAACTCCCAAAAGCCCTGTGCTTCTGGACCTTCAGTAATGCCTTTATTAATGTGGAAGTTTGTTCTTGGTTGTTTGCATGGTTCCTCATCCCATGGTGTCAGTATAATCTACTTGAGGTGGTTTGGTTTTTTCTTACTGATTTTCAGTTATTGAAACACTATGAAAGTATTTCTTCTTTAGATTCTATGAAGAAACCTAAGTTCGTACATCTTAGCCATGTTCTCAAGTCCAAACATATCAGAACAAAGTGGAGTAGTTTGCAGTATTAAGATCCTAGAGTACTTCAGCAATAAAATTAAAAAAAAAAAGATAAACCTCAACTTTAATAAGATATCCTGACACTTGATAAAAATAAATATTTGGTATTTTGTGGTTATTTAGAACCTTTTTTGTATGAAAATCGTGAGATTTAAATCAGCAATAGTAATACTTAGGTTTATATAAAATAACAAAAAACTTGCTCTTAGGTCATTTCATGTAATTAGTGATGGAAGACTCAGGAAAGGAAAGCATGGGGATTTCTGGAAGCCCTCCACCTTGGTTTCCAAAGCTTTGGTGGTGGTGGGCGTGGTGGTCAGAGCACCCACCAGGGCCCTGAATTCAGACCAGCATCGAGGGGCTGTGCAGGTTTGCTTCCCCTGGTTTGTGCCATCACAGATTGAAACTGTGTGTAATGGGGACAGTTAGCATACAGCACAAATTTTGAATTTAACGTTAGTATAACATGTAAGGTCAGGACATGTACTTATACAGCACCCCCCAGAGTGAGTGCAGCTGCTCTAAATCCCGAATTACTGTTCACTTTCAGAGACTTGAAGCAGAGGGAGGAGCCACACCGCAGTCTCCACACCCTTTTCAAGAACAACCTGTACAGTCATCAGTTTTCCTGCCTCTTTGTATTGTGATTTCTGTTAAGATTTTTTGGAGTTTACAGTGGTAAAATGTCCATAATGAAACCATCCTTCTTTAAGGCACTGCTGAATATTTCATAAATGTGTATGAAAGTACTCTCAAGGGTCCACAGTTAGTTTCTGCTACTTATTTTGGCCCATAGCACTTGGGCTTCTTTTTTTGTTTTCCTATTTTGTGTAAGTTGTAATTTAAAGCCTTTGAGTTGGTATAATCCAGAGTTCATTGGGATGTTTAAAAAGGAAAAGAATTTTTATTTCATTGGCAGGGGTGGGGAAGTGAGATACATAGAAGTAGAAATATTGTCGAAACCCCTAAATTCTTTCAAAGTAATGATGGACCTTGATGGTAAAGCCTCCAAGTTTATTAATTTTTTTGCAAGCTCTTCTTTCAGATAAGAAAATCAACTACTGTGACTGAGAAATACTCTACCGAATACTTAAACTGGTCCTCTGGCAGAAGTCTGTTCATAGTCTCATAACCTGCATTCCATACCAATAGTAGGAAAGAGATTCTTTCTTTTTTATGGAAACACAAGCATTTTTATAAAGTTCTAATTGACTTTGTACACTGTAGAAACTACATGTGTAATTTTGCCTTTTATTTTTTCATTTGGAAACTATCAAAAGTCCCCAAATATGGTTACTTCCTATTTTTGTTCTTAAATTTGATGGAGAAAATAAAATTAAGTTGCCATTATTGATTATTGCCATCTTTAGATTTCCTTGAACAAACCAATGCGTTTTAAAGACAGCAAGAGCATGTGGTTTTCTGTGAAACATTAGGATAGGTTTATTGTTTGTTGAATTCATTCCCTGCATAATGTGGTATTTCTTACTCAGAACACCCTGGTAGCTATCACTTCAAAAGAAGACAGTTCCCTTCAGAGTAATGCTTATTTATGGCTGCTGGAGGCTGGGTGGATAATTCCCTGATACATGGGATCTTGGCATTGTAAACTCAGTATCCCAGGACTTGAATCTTTATGCTACATTTTTGAAGATTTTTTAATAACATTAATTAGTAAAAAAAAAAAAATATTTTTGATCTAATATAGGCTCTGCATATCTGTTAGATTTTAAAAATTGCCAGTGTTTTGTCTTGTCCACATTTTTGTCTAGGCAAGGAACATAAGTTTTCAAATAAAATTTTGAACCAAAAACATTTATAATGCAGTTCTGGTTTTTCTATTACTTTTTATACTGTACCTTAAAAGCATTAGGCTTGGAAGAGTTTATTTTGGTGGTCAGAAAAATAGGCTTCCTCTCATTTGACTATTTTAAATGTTAAGATGTAAAATAATGAAAGACAGATAAATTGCTTTATGCAGTAAAGTGTTTTTTTAAGAATGTTTAACTCAGCCAGTGGGCAAATACTTGGTATAAGGCAAGTTGGTCTTTTCATACTGAAATGCGTTAGCTAGGAAAGATATTCTTGAAAATCTTTTTTTTTCTGATTGTAATTAATTTCGGGAAGTGTAGAAAGGTCCTTACTCCTTTGTACGTATTCAGGATGCCTGCCTTTTTTATGCAATTGTGGAAAGAATGTCAGATGTTTTAATATATTCTTTGTTAATCTGAAAACTTGTTATCTGATCATTTTCTTCATTTGGGGGGAGGGAGGAACACCACAAAAAGGGGATTTTTATCAAAATAAGTAATGGAGGTAACAAATCTTGTACATTTTTTATAGTAAAAATATTTAAAGAATAAGAGACTATTCACTTTTAGAACTGGTTATGGTTAATATGCGTTTATAACTTTGTCAAAATATACAACCAACGGTTTGACAGTGATGTTGTCTGCATCTGTAGTGAGATGGATGTGGTTCCTGGTTTTCTGTTTGGGAACAGATCATCCCAGCCTTCTCTTAAAAATATAACCCCAGCACTTAATCGGTGATCATCTGGTCCACACACAGCGCCCATGGGTGCTAAGAGTAGTAACTGAGACCGGAATTAAATGTGCCCTTTGGTGGAGAAAAGAGGTGTGTTCAGGCCAACCCTGTGGTCGGATGAGGGAGTGACAGGAATGCACTGGTCCAAGTCGGCCTTTGTTCCCTCAAACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAACCATAATCTGGAACTTCAGAAAGTAAAATTGTTTTCATTTCTTACTGCAAAAATAATTACATGTCATTTGTAACAGGTTTCTTTATAAATTGCACTAATTAATATTGGAATGTTACAAGTCAGTTTATCAATTTCTGAAGTCTCTTTGATGTTTTTTGCAATAATTGTGAAAAGCATTATTGATTTCAATAATGCTAGCACATATAATTTAATAAGTTCTTTAACACTGGCTTTTTTTAAGTTTTACACATAGTTTTTTCTCTTGTGGCTTTAGCACTTTAAGGAGTTTGGCGTTTGCATAGTTTTTGGTGTGCTTCCCAGGTATGCGCCAGGGCGTCACGTTGCCACGTGACTGGAGAAAATTCATGGTCTGTCTTTAGATTCTGGAGGAGAAAAAATGAGTCAATGTCAGGTTTTTAAAAAATTCCATTTAGAGGCAGTCATTTGGGAACCAAAGTATTTTACTGTATATCTTTAAAATCATTGAATTCAGTGCTCTTTAGTCATTTATTCGTGCTGTCCAGATTTTCCACAAAGTTATACTTGGTTAATTTACGAAAGTGATAATTTCTTCTTGACATTAATCCAAGACTGTTTCAAAATTTTCATTGAATAAATGCTTATTGCTAAAAGAACAACAAATGTGGTTTTATAACTGTGTGTATTTTGTTTCATATGCCTCTGCAGAGAAATCATTGTTCAATTTTATTTAGGAATAAGCTTTTTTGGACTGAAAATTCATAGTAAAATAGGATTCTACCTAATGTTAAGCCATCGCTTCTTTGTATCCAGTTGTCTGTTTACTTTGCTTAAATCTCAACTAAGATTGAGTGGAGTCAATAAATTTGTACTGTATTTTGTTTTGAGTTGTGGTCTCATTGGTATGTTTTGGACTTGAATGATACAATAGTTTATGGAAGCTGAGATAAAGCCTTTCCTTCTGCTTGGGGAGTGTGAGTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCATCAGGCTTCCCTGTCCGTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGGCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTGCGACTCTTCGCAACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATGGCCTTCTCCAGGGGAGTGTGAGTAGCCACCCACATAAGAGCTGTGAGAGAAATTTCGTCTCCCCACTGCTCCAGGTGACTTGTAAAGCTTAAGTTATTCAGGCACCACAGATGCATAATAAAACCCCATAA EMBV3_37636 TTTCTGATTACAACTCTAACAGCCCCTCTGTGGATAAGCCTTCCTTGATCACCGCGTCCC Gene BVV0101_040557 + 0 NULL GK000029.2:41473616-41501195 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06260 CCTAGCCGGAAACTCTTTTCTGAATATGACCAAGTAGCTTGTGGCAGACCAACACTGCTG Gene BVT0101_030553 + 0 NULL GK000025.2:28472466-28509105 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26684 AAATACATCGCCGGAAAGAACCTGGGTGTTAGTGTTTGCAGTAAGCGACGCCAGTAGCTG Gene GeneID:280691|H4:NM_173880:9_cdna UTR3_Alt 1 NULL GeneID:280691 23 GENE H4 NULL histone H4 EMBV3_27151 GAGTTCAAGCTCCAGCAGACGAGCTGTCGGAAGAAAGACTGGAGGAAAGAAGACTGCAAA Gene GeneID:508990|RARRES2:NM_001046020:598_cdna Constitutive 0 NULL GeneID:508990 4 GENE RARRES2 MGC137253 TIG2 retinoic acid receptor responder (tazarotene induced) 2 EMBV3_17386 ATGATGGCAGCTGGACCCAAGAGAAGCCTGAAGCAGACGACTCAGCACACCCTGCCAAAA Gene GeneID:505995|RDH11:XM_002690979:248_cdna Constitutive 0 NULL GeneID:505995 10 GENE RDH11 NULL retinol dehydrogenase 11 (all-trans/9-cis/11-cis) EMBV3_35450 TGGCAGGAAGAGCCGATTGTTCTCGAGGTTGTGGGTTGTGCAATAGAGCAGACGAGCTTT Gene BVV0102_215269 + 0 NULL GK000004.2:95402775-95454900 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39644 GCATTTAGAAGCTTACCTGAAATCTGCCTTTTATAAAGGAATAGTATGGATAAGTTGAAC Gene GeneID:327705|ASAP1:NM_175821:8_cdna Constitutive 2 NULL GeneID:327705 14 GENE ASAP1 DDEF1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 EMBV3_04374 CACGCCATGATGGAAAGGAAGTTGATGAAGGTGATTCTCATCTAAATGTTCAAGTTAGCA Variant GeneID:509788|MTDH:NM_001046038:27_cdna 586^762 3 EMBV3_31548 GeneID:509788 14 GENE MTDH MGC137491 metadherin EMBV3_02883 GCTGGGACAGCGGCGGCCGGAGCGCGAGAGGTAAACCTCAGCCGGTGCTGCAGGTGGTCT Variant GeneID:767586|KANK2:NM_001076531:111_cdna 64^277 1 EMBV3_23811 GeneID:767586 7 GENE KANK2 ANKRD25 KN motif and ankyrin repeat domains 2 EMBV3_18076 AAGCACCATCGTTTCTACTCCTCCCTCTTCGCCCTGGTGAGGCAGCCCAGATCGCTGCAG Gene GeneID:616286|ASB10:XM_002686976:796_cdna Constitutive 0 NULL GeneID:616286 4 GENE ASB10 NULL ankyrin repeat and SOCS box-containing 10 EMBV3_06487 CCATTTCCGGCAGGGGAGGGCTACGACTGAGGAAGGGAGGAGAGAGAGGCGGCTCAAGAT Gene BVT0102_124506 + 0 NULL GK000030.2:40089667-40097614 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246842 TCONS_00246845 TCONS_00246850 TCONS_00246848 TCONS_00246847 TCONS_00246846 TCONS_00246843 TCONS_00246844 1 XLOC_151135 Coding TCONS_00246842 XLOC_151135 Coding Coding HCFC1 X:40074359-40096051 j TSS184981 7256 1 TCONS_00246842_9 1694 27 0.666728136093311 0.000341272318403511 8.46059586995459e-15 2.96330018386719e-06 0.00021425643789447 0.00174566524645521 4.11521054288136e-30 0.00141153397361646 0.00125121900638029 0.000654680201916554 2.34438708549984e-05 0.00117764396843495 0.000699395711588197 0.00034152725765002 3.39134970313606e-103 9.11673243700498e-06 0.00027430433392819 0.000316401414451652 0.00219101566749795 0.00158716104896942 0.00387787935260268 1.25375463534277e-107 0.000346193554051346 1.26803524495141e-14 0.000298055246905152 0.0059789393346778 0.00380751711196759 0.00172183308374694 6.43837623124745e-05 0.000259777590263591 0.000531159323223621 XM_002707908.2 HCFC1 PREDICTED: Bos taurus host cell factor C1 (VP16-accessory protein) (HCFC1), mRNA. 0.0 6607 99.76 0.507855567805954 XM_005274664.1 HCFC1 PREDICTED: Homo sapiens host cell factor C1 (VP16-accessory protein) (HCFC1), transcript variant X1, mRNA. 0.0 4938 89.70 0.508544652701213 TCONS_00246842_9 sp|Q61191|HCFC1_MOUSE HCFC1_MOUSE Host cell factor 1; 0.0 1764 96.87 0.602125147579693 7 coding 1 0 1 1 0.0296864590410811 0.781714481602789 -0.00412612348089064 0.941473014335018 GGGGCTCCGCCATTTCCGGCAGGGGAGGGCTACGACTGAGGAAGGGAGGAGAGAGAGGCGGCTCAAGATGGCGGCTCCCAGGGCCTCCCGCTCGAGCTTGTAAGTGGGAGCTCCCAGGCAAGTAGTCAGGGCGGCGGGACTCGACGGCCTCCAGCTTCTCGGGTCCAGGCGCTTGACAGTTTCAAGAGGCTCTTGACAAGACGCGGTAAGCGAGAAGAAGGGGAAGAGGAGAAGGGAAGGAGAAAATAGTTAAGATGGCGGCCTCCATGGAGCCGTCCACCGCTGTGTGAGGAACAGTTTCTCAGTGAGAGCCACCTTGGACGAAAAGGGGTGTGTGTGAGTGGAATTGGGGGGCTCCCTTCCCACTTGGCGACTCTTCTCCACCGCACCCTTTCCCGGAACTATGGCTTCGGCCGTGTCACCCGCCAACTCGCCAGCGGTGCTCTTGCAGCCCCGCTGAAAGGGAGTGGTGGGCTGGTCGGGTCCAGTGCCCCGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGTGGTGTTTGGCGGCGGCAACGAGGGGATAGTGGACGAGCTGCACGTGTACAACACGGCGACCAACCAGTGGTTCATCCCAGCTGTGAGAGGGGACATCCCTCCTGGGTGTGCAGCCTATGGCTTCGTGTGCGATGGGACACGCCTGCTCGTGTTTGGAGGGATGGTGGAATACGGGAAGTACAGCAACGACCTCTACGAGCTCCAGGCAAGCCGGTGGGAATGGAAGAGACTGAAAGCAAAGACGCCCAAAAATGGGCCACCTCCGTGTCCTCGGCTTGGGCACAGCTTCTCCCTTGTGGGCAACAAGTGTTACCTGTTTGGGGGTCTGGCCAATGATAGCGAGGACCCCAAGAATAACATTCCGAGGTACCTGAATGACTTATACATCCTGGAACTGCGGCCGGGCTCTGGAGTGGTAGCCTGGGACATTCCCATCACTTACGGCGTCCTGCCCCCACCCCGAGAGTCTCACACTGCAGTGGTCTACACTGAGAAAGACAACAAGAAGTCCAAACTGGTGATCTATGGAGGGATGAGTGGCTGCAGGCTGGGGGACCTCTGGACCTTGGATATCGAGACTTTGACATGGAATAAGCCCAGCCTCAGCGGGGTGGCACCTCTTCCTCGAAGTCTCCACTCGGCCACGACCATAGGAAACAAAATGTACGTGTTTGGTGGCTGGGTGCCTCTCGTCATGGATGACGTCAAAGTGGCCACACACGAGAAGGAGTGGAAGTGTACCAACACTCTGGCTTGTCTCAACCTGGATACCATGGCTTGGGAGACCATCCTGATGGATACGCTGGAAGACAATATTCCCCGGGCCCGTGCTGGCCACTGTGCGGTAGCCATCAATACCCGCCTTTACATTTGGAGTGGGCGTGACGGCTACCGAAAGGCCTGGAATAACCAGGTCTGCTGCAAGGACCTCTGGTACCTGGAAACGGAGAAGCCGCCACCTCCAGCCCGGGTACAGCTGGTGCGAGCCAACACTAACTCCCTGGAGGTGAGCTGGGGGGCCGTGGCAACAGCCGACAGTTACCTTCTGCAGCTCCAGAAATATGACATTCCTGCCACGGCTGCCACTGCCACCTCCCCCACACCCAATCCAGTCCCGTCTGTGCCTGCCAATCCTCCCAAGAGCCCTGCCCCAGCAGCAGCCGCACCTGCCGTGCAGCCGCTGACCCAAGTAGGCATCACGCTCCTGCCCCAGGCTGCTGCCGCGCCCCCGACCACCACCACCATCCAGGTCTTGCCGACGGTGCCTGGCAGCTCAATCTCCGTGCCCGCCGCAGCCAGGACTCAAGGTGTCCCGGCTGTGCTGAAAGTGACTGGTCCTCAGGCTACCACGGGAACCCCGTTGGTCACCATGCGACCTGCCAGCCAGGCTGGGAAAGCCCCCGTGACTGTGACCTCCCTTCCCGCAGGCGTGCGGATGGTTGTGCCTACACAGAGCGCCCAGGGGACAGTCATTGGCAGCAGCCCGCAGATGAGTGGCATGGCTGCATTGGCAGCCGCGGCTGCTGCCACCCAGAAGATCCCTCCTTCCTCGGCACCCACGGTCCTGAGTGTCCCGGCTGGCACCACTATCGTCAAAACCGTGGCCGTGACGCCGGGCACCACCACGCTCCCAGCCACTGTGAAGGTGGCCTCCTCGCCAGTCATGGTGAGCAACCCAGCCACTCGCATGCTGAAGACTGCAGCTGCCCAGGTGGGGACTTCCGTCTCTTCTGCCGCCAACACATCTACCCGTCCCATCATCACCGTACACAAGTCCGGAACCGTGACAGTGGCCCAGCAAGCCCAGGTGGTGACCACAGTGGTGGGTGGGGTTACCAAGACCATCACCCTGGTGAAGAGCCCCATCTCGGTCCCAGGAGGCAGTGCTCTGATTTCCAATCTGGGCAAAGTAATGTCAGTGGTCCAGACCAAACCGGTTCAGACTTCGGCAGTCACAGGCCAGGCATCTACAGGCCCGGTGACTCAGATCATCCAGACCAAAGGACCCTTGCCAGCCGGGACCATCCTGAAGCTGGTGACGTCTGCAGATGGCAAGCCCACTACCATCATCACAACCACACAGGCCAGCGGGGCAGGGACTAAGCCTACCATCCTGGGCATCAGCAGTGTGTCCCCCAGCACCACCAAGCCCGGCACCACCACTATCATTAAGACCATCCCCATGTCGGCCATCATCACACAGGCGGGCGCCACGGGCGTGACTAGCAGTGCCGGCATCAAGTCACCCATCACCATTATCACCACCAAGGTGATGACTTCCGGAACTGGAGCCCCCGCCAAAATCATCACGGCTGTTCCCAAAATCGCTACGGGTCACGGGCAGCAAGGAGTGACCCAGGTGGTGCTGAAGGGCGCACCTGGCCAGCCAGGCACCATCCTCCGCACCGTGCCTATGGGGGGCGTCCGCCTGGTCACCCCTGTTACCGTCTCTGCTGTCAAGCCTGCTGTCACCACACTGGTTGTCAAGGGCACCACAGGCGTCACGACCCTGGGCACGGTGACAGGCACCGTCTCCACCAGCCTGGCCGGAGCCGGGGGCCATAGCACCAGCGCCTCACTGGCCACACCCATCACCACGTTGGGCACCATCGCCACCCTCTCAAGCCAGGTGATCAACCCCACTGCCATCACTGTGTCTGCGGCGCAGACGACGCTGACAGCGGCCGCTGGGCTTACCACACCCACCATAACCATGCAGCCTGTCTCCCAGCCTACCCAGGTGACTCTGATAACGGCCCCCAGCGGGGTGGAGGCCCAGCCTGTGCACGACCTCCCAGTGTCCATTCTGGCCTCCCCTACTACAGAACAGCCCACGGCCACGGTCACCATCGCTGATTCGGGCCAGGGTGATGTGCAGCCCGGCACCGTGACCCTGGTGTGCTCCAACCCGCCGTGCGAAACCCACGAGACGGGCACCACCAATACAGCCACCACCACCGTCGTCGCTAATCTGGGGGGGCACCCCCAGCCCACCCAAGTGCAGTTTGTCTGCGACAGACAGGAGGCCACTGCTGCTCTCGTGACCTCCACGGTGGGCCAGCCGAATGGCAGTGTAGTTCGTGTCTGCTCCAACCCCCCGTGTGAGACCCACGAGACGGGCACCACCCACACACCCACCACGGCCACATCCGGAGGGGCTGCAGGCCAGCCAGAGGGCGGGCAGCAGCCTCCTGCCAGCCGGCCCTGTGAGACGCACCAGACCGCTTCCACTGGCACGACCATGTCCGTCAGCTTGGGCGCCCTGCTCCCGGATGCCGCCCCCTCCCACAGGACCCTGGAGTCCAGCCTGGAGGTGGCAGTGCCACCCGCAGTCGCCCCTCAGGCCGGTGCTTCGTTGCTCACTCCTTTCCCGACGCAAAGGGTGTGCTCCAACCCACCCTGTGAGACGCATGAGACAGGCACTACGCACACGGCCACCACTGTCACCTCCAACATGAGTTCCAACCAAGACCCCCCACCGCCTGCCGGCGACCAGGGAGAGGTGGAGAGCACCCAGGGCGACAGTGTGAATATCGCCAGTTCCAGTCCCATCACGACAACAGTGTCCTCCACGCTGACGCGGGCCGTGACCACCGTGACACAGTCCACGCCAGTCCCAGGCCCTTCGGTGCCGCCCCCAGAGGAGCTCCAGGCCTCTCCAGGGCCACGCCAGCAGCTTCCACCACGGCAGCTCCTGCAGCCTGCCTCCGCGCCCTTGGTGGGGGACTCCGCCGAGGTCCTGTCAGCCTCCCAGAGCCCTGAGCTCCAGGCCGCCGTGGATCTGAGCAGTACAGGGGACCCGTCTTCAGGCCAGGAGCCTGCCAGCTCGGCTGTGGTGGCCACCGTGGTGGTCCAGCCACCGCCGCCCACCCAGTCCGAAGTAGACCAGTTGTCCCTCCCCCAAGAGCTGATGGCCGAAGCCCAGGCGGGCACCACCACCCTCATGGTGACAGGGCTCACCCCAGAGGAGCTGGCAGTGACTGCTGCTGCTGAAGCGGCCGCGCAGGCTGCAGCCACAGAGGAGGCCCAGGCCCTGGCCATACAGGCCGTGCTCCAGGCCGCACAGCAGGCTGTCATGGGCACCGGGGAGCCCATGGATACTTCAGAGGCGGCCGCAGCGGTGACACAGGCAGAGTTGAGCCACCTGTCGGCCGAGGGCCAGGAAGGCCAGGCGACCACTATCCCCATCGTGCTGACACAGCAGGAGCTGGCTGCCCTGGTCCAGCAGCAGCAGCTCCAGGAAGCACAGGCCCAGCAGCAGCAGCACCACCTGCCCACGGAAGCACTGGCCCCGGCTGACAGCCTCAATGACCCGACCATCGAGAGCAACTGCCTCAATGAGCTGGCCGGGGCTGTGCCCAGCACCGTGAGCCTGCTGCCCCCCACGGCCACTGAGAGCCTGGCCCCGTCCAACACATTTGTGGCCCCCCAGCCGGTCGTTGTGGCCAGCCCCGCGAAGCTGCAGGCCGCAGCCACCCTGACGGAAGTGGCCAATGGCATTGAGTCCCTGGGTGTGAAGCCAGACCTGCCACCGCCACCTAGCAAAGCCCCTGTAAAGAAGGAGAACCAGTGGTTTGACGTGGGGGTCATTAAGGGTACCAATGTGATGGTGACACACTATTTCCTGCCACCCGAAGATGCTGTCCCGACTGATGATGACTCGGGCACCGTGCCCGACTACAACCAGCTAAAGAAGCAGGAGCTGCAGCCAGGCACTGCCTATAAGTTCCGCGTCGCCGGGATCAATGCCTGCGGCCGGGGGCCCTTCAGTGAGATCTCAGCCTTTAAAACGTGTCTGCCTGGCTTCCCAGGGGCCCCGTGTGCCATTAAAATCAGCAAAAGTCCAGACGGTGCTCACCTCACCTGGGAGCCACCCTCTGTGACCTCCGGCAAGATCATCGAGTACTCAGTGTACCTGGCCATCCAGAGCGCGCAGGCCGGTGGTGAGACCAAGAGCTCGACCCCGGCGCAGCTGGCCTTCATGCGGGTGTACTGCGGGCCCAGCCCCTCCTGCCTCGTGCAGTCCTCCAGCCTCTCCAACGCCCACATCGACTACACCACCAAGCCCGCCATCATCTTCCGCATTGCTGCCCGCAATGAGAAGGGCTACGGCCCAGCCACCCAAGTCAGGTGGTTGCAAGAAACCAGTAAAGACAGCTCTGGCGCCAAGCCGGCCAGCAAGCGGCCCATGTCGTCTCCAGAAATGAAATCCGCGCCAAAGAAATCGAAGGCAGACGGTCAGTGAGAGGCAGCTGCCCGGCGCCTGGCTTCTTCTCCAGCCTCCCCTCTGCTTCAGGACCGCCGCCCGCCCGCCCCGCCCCGCCCCGCCCCGCCCACCCCACCCGCCTGGAGCGAAAGAACCTCACGAGCCAGCAGCTGCCCTCCTCTCCCCTTTCTCTCTCTGTTTTTACAAGAATCTTGAGAAAGCACATTTTACAATGGCTGTGAGGAGGGGGGCGGTGGGGGAGCGGAAGGCAGATGCTAAAGAGCGAGTGAGGGAGCGGGCGCCCCCCCTTCCTCCAGGGAGCCCTCAAGCGAGAGACCTAAATGCACGGGAGCAGATGGAAAGCCCACCTCCTCCAAAGTCTGCACACCTCTCGCTGTTGCCCTTGGCTCCAGGGATCAGCCAAGGCCCGAGGAGTTGAGGGGGGTAGCTTGTAGAAGCACCTCCGGCCCCCTTCCCTGCCTCTAGTCTCAGAGGCTTGGGGGGCACCCCCCCCCCACTCCGAACCGGGTATCTGTCTGGTTCTATTTTCTTTTGTGACCTTAGCATTTCTTGCCACGTGACGCCCGCCTGCCCTTTTGGTTTATCCAACCCTGCCCTGCCTGGCAGTCCCATGGGAAGCTGACACGTTTTCTCAGAGGCCTTCGTTCTCCCATCCCGTTCTCCCTCCCCTCCTCTTACCATTCAGAGAAGAAAAAGTGAGGGGCGGAGAAGGAGCCCCGTGGTGGCCTGAGCAGTGTTCTATGAAAACCTCCCAACGCCCACCTGGGGCCTCGAGGAGCCCTCCCACCAAGCCCGGCTTCGACCTCTCTGGGGTCGGGGTTAGGGGCCACATCACCAACTGCTGCATTTGTTGTATTTTTTTTAAGTTGAAATGGATGAAGTTAACAGTTTTATTGTAATTTTAGTCTTAGCGTGTGGGGTTTTGTCCCTTTTTTTGTTGTTATTAGTTGTGTACAGAATGTGGATCTTTTTCTGTTTGTTTGTTTTGTTTTGTTTTGTTTTGTTTTTAACTTTTCTCCTTGGCGAAGCCTTGGCAGGGATCTTTCTGGACGAAAAAGTGAGGGGCAGCCAGGGCAAGACTATGGCATTTTCCCTGTGGGCCTGGTGTCTGCTGCCCAGTGCGATTTCCTTCTTTCTGGCCCCTGCCCTGTGCCCCGCTGCCTGTCCCCAGGCCTCTGGGATGATGGAGGGTGAGTGGTCAAATCTTGCCCCCCTCATGGGCCATGGCTCCAACACTTAGAGGCTTGAGCTTGAGAGTCCTCTAGAGCCCGGAGTCAGACTTCCTGAGGACGATGGTGCAAAGGCGTGGGCACGACCCGATACCCAGTCCTGGGTCCGTGGCCCTCTCCATGACCCCCAGGCTCCCTCCCTGGCATAAGCGCTTAGAGCATCCAACACACACAGCCGCTGCTTTCTGCGGCCACCCTCTCTGGGCAGGGATGGCACACATTGGACAGGAACCCAGCCTCTGAGGCTGCCTGGGATGANN EMBV3_18359 CCAGAAGGCGAGCTGTGCTGCCCACTGGATGGAACCAAGACCCACGAGGAGGGGAGGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27460 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37055 ATCCCGCACCCCTGCTACAACAACAGCAAGAACGACCACAGCTACGACATGATGCTCATT Gene GeneID:618438|KLK8:XM_002695140:674_cdna Constitutive 0 NULL GeneID:618438 18 GENE KLK8 NULL kallikrein-related peptidase 8 EMBV3_31581 GAGACGAGGAAATGGTGGTTCAGAGGGATAAAGAGTATTTCACAAGGTCAAACAGCTGAG Gene BVV0102_327175 + 0 NULL GK000007.2:51243231-51278941 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41905 TTACATGTTCTTCTGTCTCTGCCCCAACCCTGTGCGGCGCTTTGAGGAACCAGAAAAGAA Gene GeneID:513858|TBC1D10B:XM_002698060:26_cdna Constitutive 0 NULL GeneID:513858 25 GENE TBC1D10B NULL TBC1 domain family, member 10B EMBV3_28885 CTGAGCATCCTGCGTGGAGCACCCCCGCACAGCCCCCCGATGTGTGACGAGCACGTCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21426 ATAATGGACTGGCTGGAAGTCTAAAGGGGGAGGGGAAGGGGAACTGATATCTCCCAAGAT Gene GeneID:504520|HNRNPL:XM_002694980:157_cdna Constitutive 0 NULL GeneID:504520 18 GENE HNRNPL NULL heterogeneous nuclear ribonucleoprotein L EMBV3_16984 AAGTCAACCACAACTGCACAGGAAGGAGCTGGCAGGAGATGAGGATGCTTTTAGACTGAG Gene GeneID:281766|FCGR3:NM_001077402:189_cdna UTR3_Alt 2 NULL GeneID:281766 3 GENE FCGR3 CD16 FCGR3@ FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a) EMBV3_33854 TTTTTTCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAGTGCTGTTTGT Gene GeneID:522863|NMNAT1:NM_001075834:79_cdna UTR3_Alt 2 NULL GeneID:522863 16 GENE NMNAT1 MGC139127 nicotinamide nucleotide adenylyltransferase 1 EMBV3_18201 CCATCCTGAAGGAGGAGGGCGAGCACATAAGAGAAATGGTGAAGCAAATTAACGACATCC Gene GeneID:504786|NUP88:NM_001034222:42_cdna Constitutive 0 NULL GeneID:504786 19 GENE NUP88 MGC128192 nucleoporin 88kDa EMBV3_08048 ATTCTGCAGGCACAGTCTGACATTCACTGAGCGCTGTTTATTGAGCGCCTACTACACGTC Gene BVT0102_062255 - 0 NULL GK000016.2:3351234-3367779 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068531 TCONS_00068529 TCONS_00068530 TCONS_00068532 1 XLOC_041721 Coding TCONS_00068529 XLOC_041721 Coding Coding SLC41A1 16:3364316-3372915 j TSS51294 4189 2 TCONS_00068529_2 165 0.0842683217951778 5 0.513375203535706 0.00106514355876299 0.00076648498782039 0.000630127211482679 0.000514310651178771 0.000370775891200471 0.00016690988214162 0.000527701270258198 0.000638548254491756 0.000581937764575701 0.000421363995300583 0.000178646965819861 0.000122663930287996 3.39609156208258e-05 0.000461888324704116 0.000273240396914037 0.00284658163673021 0.00147805293034535 0.010301850200636 0.000890160911505751 0.00200581439889054 0.000426906106354926 0.00178203939239323 0.00239779978366041 0.00231533667440592 0.00150457960192736 0.000743476168475722 0.000841731887134304 0.000683176205919006 0.00044877572656865 0.00139433605245654 XM_005216683.1 SLC41A1 PREDICTED: Bos taurus solute carrier family 41, member 1 (SLC41A1), 0.0 5258 100.00 0.695631415612318 NM_173854.4 magnesium transporter Homo sapiens solute carrier family 41 (magnesium transporter), 0.0 1876 73.80 0.694915254237288 TCONS_00068529_2 sp|Q8IVJ1|S41A1_HUMAN S41A1_HUMAN Solute carrier family 41 member 1; 3e-114 338 99.39 0.993939393939394 1 coding 0 0 0 0 0.0540837164791955 0.738201582203536 0.0252025428213471 0.610480608306679 CCACGTTGGCTTAGGGAGCTGACTACACACAGCTGGGCTCAGGATCATAAATGATCGGGCCCCAGCATTCTCCGTCTCTCACCTCTGCTTTTCTGTGTGCTGGCCTGCAGCTTCAGTGTGGGAGGCCTCATCTTGGACAAGACGGTTTCAGACCCCAACTTTGCAGGGATGGCTGTCTTCACACCGGTGATTAACGGTGTTGGGGGCAATCTGGTGGCCGTGCAGGCCAGCCGCATCTCCACCTTCCTCCACATGAACGGGACTCCAGGGGAGAACTCGGAGCAAGCCCCCCGCCGATGCCCCAGCCCTTGTACCACCTTCTTCAGCCCTGATGTGAATTCTCGCTCGGCCCGCGTGCTCTTCCTCCTCGTGGTCCCAGGACACCTGGTGTTCCTCTATACCATCAGCTGTATGCAGGGTGGGCATACCACCCTCACCCTCATCTTCATCATCTTCTACATGACAGCTGCTCTGCTCCAGGTGCTGATCCTGCTCTACATCGCAGACTGGATGGTGCACTGGATGTGGGGCCGCGGCCTGGACCCAGACAACTTCTCCATCCCGTACTTGACAGCCCTGGGGGACCTTCTCGGCACCGGGCTCCTGGCACTCAGCTTCCACGTCCTCTGGCTCATTGGGGACCGAGACACAGATGTCGGGGACTAGCCCGGTCACTCAACCTTCTGTCCACCTCTCTGCACTTTCTGTTTGAAATTTTTTGGGGGAGGGGGCGGTCTTCTTCCCTCGCCCCCACCCCACTCGACACTCCCATCTCTTTCTAGGACTTCATGTGGATACCGAATTCTCATTATTTTCAATGGGAATTTTTATACATTGAGCCAAGTTTGTAGAGTAAGAATTCAGACAAGACAGAGGGACTGAGATGAACAGTACAAGTAGGTGTTTGGGCCAGTCACCAAGTGCAGCTGCATGGTGGGTGCCTCCAGGGGAGATGCCTGGGGCAGGGGTCTCCATCCAGGATGTGGGGGCACTTGGTTTAGCTTTAGCAAACTCCAGTTCTGGTTTGGGGGGTTTGTCTTTGTTTTCTCTTTTTCTTTTTGGTTGAACAGAGGGATAAATGTCACTCTCCCCTCTCCCTACACATACGTTTTCTAGAAGTGGACCAACTTCAAAACCCTAAGCAAGAGACAGCTGCTCCTAGCCCCAAGTAATCCTAGCCCTGTTCTCTGCCCTGCTCTCCAAAAGGATGAGGTGAACTCCTTAAATTATATACCTGCTCCTTACCCAACTGCCTGATACATACCACCAGCCCCTCCCTCTGATCTTTTTTCCAACTGACTGCCTCATCCAAGAAGAAATGAGCCATGACCTGGTCTCCCTGTTGGCCCATGTCCACCCATAGGTTTGCCAAAATCGACATCCTCCCTGGACCCAGAAACCTGATTCTTCATCTCTGTTCACCTTTATCTCTAATGATTTCTAAGCACGACCTTCCCCAGAGCTTGCCGCATTGGCTTCCGAGATTAGGGACGGAGAATGGGTTTGTGGAGAAGCGCTGGGCGGTTGATGGGTGTTTCCCTGCTGCTGTTTCTCCCGATTATGATTTCTGCCATAATCACATGGCCCCTGAGAATCTCTTGCTTCCTGAAATCACTCATTCTTTCATGCCGTGGAAGTCAGTTTTCCCCTCTCTCAGCTTCTGCCCACATCCGTCTTGTATTCATTCACTCATTCAGCAAATACGCAGCTTCCCCAAGAGGCGCGATTCTGCAGGCACAGTCTGACATTCACTGAGCGCTGTTTATTGAGCGCCTACTACACGTCAGGTCCTGTGCTGGGTACTGACTGGCCAGAGGAAACACAGTCCCGCCCTTGCCTCTTTCCCTGGGTGCAAAGCCTGCGTGCCCTTTTCAGTCTAGCAGAGAAAGCGTCTTCACTGTACTCCCCTCTTTGTCCAAGCAGGGTCTGCCTCTCGACGCCGCTCCTGGCTCCCACCTGCGTGCAGCACTGGCCACAGCTCAGGCCCCATGGCTCAGCCACCACTGATTTCCCTACACTGCCTGTCTCACCCTCGCTTCCTTCCATGTCCTCACCAGTCACCTGAAAGAGGGTTCAGATCTAGAAGGCCAGACATCCACCCACTGCTTCCAGTTTACCCAGCACAGGAGTGGGAGATCGCTGGGGCCTCTGCATCCTCCCAGCACGTTACTGTGAACAGGTCAGAATTCTGCTGCCCACACTCACGTGTGGACAGACCTGGGCATTCGGATGCAGGTTTCTTCCAGCCTCTCTGTCCATAGCCTGCCCTTCAGCTGTCCCCCTCTTGTCAGCTAAAGGGCCTGTCTCCAGAGGAAGGCCAGGCAGTGACCCCGCCTCTTACCACCACCCTGCCTCACCCCAAGGAACTTGCCCTACACCTCTAGAGACTCTTTCTCTCTCTGCATTTCCACCCAGGCCACCCGCCAGAGCCTAGGCCCTTAGACTTGGAATCATAGAGGTTACCCAGCTGGGGCTTCCCCCAGCAGAGTTCACTGACACCAGCCCAGCCTTGTTCCTGCTCTTCTCAGGCCTTCTCCTATCTTGTCGTCCATCTCCAGACACGTTTGCACACAGACTCTTGTACAGGCATCAGAACCAACCCCTCCGCCCCCAAGGCTGTGCCCCTGTGGTCTGCAGTCACCCCCACCCCAGGCACTCACCCCTTTCTCCTCTCTGGAGTTCACCCAGGCTGCCCTGGAGGAGTCCGGTGTGCCCTCCTTTGCCAGAGAAGTGGGAAGGTAGGCGTGCCCCAAGCCCTGAGGATGAGCAGAGGGAGGTCTGCAGGGCGAGAGGGAAAGAAAATGAACTTCATGACTTTCATGGATGATCCATTTCTTTCCCCCCAATTGCACAAACCACGTGGATTTCTGGCCTGGCTGTGGGAGCAACATTGGTTTACTCTTATATCCTTAAAAAGTTACAGAACTGTGTCCTAAGAATTATTTATAGTGACTATAACTGAATTGACAAATGTCAACATAACTGATAAATTATATTTGGTAAAATAAAGAGGACGTTTATTTAGGTGGTTGGTGGCTCCTGTGTGTCTCATCCAAAAGCAGCTTCCCCTGCTGTCTTGGGCCTGCTCTGCGGCCCCACCCCTCCTTGCATAGAAGTGGAACGAGGCCAGAGAGTGACAAGAAACGAAATAGCTCTTAAATACAGAGATGTGTGATAGGAAACAGTCATTTCTTGAGAAGCAGCCAGTGCTGCTCTGGGGCATCCTCCCTGCTCTCCACACACTGACTCGGCCTTGGTTGGGGTGTTGGCAAAGGGCGCACCTGGGGGTTAAGAGTCCTTCCTTGCAGAGGTTTATCCCCTGCTTGGGCCACAATGACAATACCTGTATTTGTTGAGTACTCGCACTTGGCTTCACTATGCTCAGCACTGTAAGTGCTTAGAAATGTATAGTTGACTGCAAAGGGTTTAGAATCTGGCCTGGATCCAGATCTTCTAATTGTATTTGTGTGACACTGGACAAGCCGTTTACCCTCTCTGAGCTTCAGTTTCCTCATCTGTACAGACACCTAGGGTCGTTAGGAGACTCCAATAAGACAATTCACAGAAAGCAATAAGCACTGCCTGGCACACACCAAACCCCAACGTAGTAGTCATTTTTAAAGTGAAAGGGAAGTGGGCCAATCTCTAGACAATGTCAATACACTGACCATAGGGGTGAATCAGGATTAACTGGGGAGCAGGCAGGTGGAAAGAACACCCAACCAAGTCTTGAGGGTCAGGGAAGTCTTCGAGGAAGCCAGGAAGAATAGGAGAGCAGCATGAGAGGAGAGACGCGACATGGAGGAGAAATGGTGAGCTGAACAGGGCAGTGAGCCTGGCACCTTTGGGAACTACAAACAGTTCATACGACTGGAGTTTGCAGGGCAGAGAGTGATAACACAGCCTTCTGAGAGACACACATGTCTGTGACAAAGCAGTTTCTCTGAGATGGCAGGTAGGGAAGGGCAGAGTCACAGTGCAGCCCCATCCAGGCCTGACTAAAGCCTCTGCTGGGAACCACTGCCCACCCAGGACACGCCCCCCCAAAGATTCAAGACCATGTTACACAGCACACAGTGCTGAGCAGTACCCTACTCAATGATCAGCCTTCTTTTTTCCAGCTTTATTGAGATAAAATTGACAAATAAAATTGTAAGATAGTTAAAGTGTGTACTGTGATGATTTCATA EMBV3_16109 ACCCAACCCCTAAAGACAGTAAGATAGTTGGGAGTGAGGGCTTGAAATGGCCTCCTGGGT Gene GeneID:533605|IL17RB:NM_001083467:229_cdna UTR3_Alt 2 NULL GeneID:533605 22 GENE IL17RB MGC148783 interleukin 17 receptor B EMBV3_00265 AGCTTCCACCTCCTGTGGCTCAAAAGAAAGAGAGCAATCTGAAGACTTGGGCTAATGTGC Gene GeneID:767816|MS4A14:NM_001076541:27_cdna Constitutive 0 NULL GeneID:767816 15 GENE MS4A14 MGC137320 NYD-SP21 membrane-spanning 4-domains, subfamily A, member 14 EMBV3_32316 AGAAACTGGATGTCCACCCTCTGGCCATGTCTGATCTGTGAACCATCTCTTCTCCTGTTG Gene BVT0102_207267 + 0 NULL GK000011.2:63240517-63290476 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09639 CCTGTTGCTCCAGTATAACCTGCAGTGTCCTAACTAAACTTACTCACTTGGTCTTACCTG Gene GeneID:528265|SNX3:NM_001079778:44_cdna Constitutive 0 NULL GeneID:528265 9 GENE SNX3 NULL sorting nexin 3 EMBV3_14128 CAACCGCCATGCCTTCTGGGTTAGAACCACTTATCCGCATCCGTTTCTGAGTTGGGCATT Gene GeneID:100139105|RAB3D:XM_002688845:171_cdna Constitutive 0 NULL GeneID:100139105 7 GENE RAB3D NULL RAB3D, member RAS oncogene family EMBV3_11944 GGGCAGTACGTGGTGGATCTGACGTCCTTTGAGCTCTTCAGTCAGCCATTCATCCAGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28478 AACCTTGGCTCGTTACCCCAAAACTAACCACAGAGGTCCCATTCAGCTGTGGCAGTTCCT Gene GeneID:514231|ETV2:XM_002694937:41_cdna Constitutive 0 NULL GeneID:514231 18 GENE ETV2 NULL ets variant 2 EMBV3_12931 TACGAGAGTGGCCCCTTCCAGCAGCGCGCCCTGCTGAAACCCTCAGCGTGTCCGCAGGCA Variant GeneID:506946|DTYMK:NM_001098893:17_cdna 501^749 4 EMBV3_05275 GeneID:506946 3 GENE DTYMK MGC148989 deoxythymidylate kinase (thymidylate kinase) EMBV3_09070 GGACTGTGTCAAGTTCCACCCCAATTCAAACTATTTAGCCACGGGCTCGACAGACAAGAC Gene GeneID:524817|TAF5L:XM_002700389:49_cdna Constitutive 0 NULL GeneID:524817 X GENE TAF5L NULL TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa EMBV3_18626 GCTGAGAAACCTGTCTTCCATCCACTCTCCTGTCCCAAGTTTTGTTTTCTTGCTATTTTT Gene GeneID:538820|PAN2:XM_002687577:633_cdna Constitutive 0 NULL GeneID:538820 5 GENE PAN2 USP52 PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) EMBV3_26939 ATTGCACCCAATGAAAACCCAGAGGAAGCTGTAAGAGAAGCTGCTGCCGAATCTGACAGG Gene GeneID:788471|RNF139:XM_002692625:76_cdna Constitutive 0 NULL GeneID:788471 14 GENE RNF139 NULL ring finger protein 139 EMBV3_29251 ACATCGTCAGAAACTAGATGATCAGACCAAGCCTGGGAGCTTGTCCTTTTCCGAGCGGCT Gene GeneID:529631|RUNX1:XM_002685148:111_cdna Constitutive 0 NULL GeneID:529631 1 GENE RUNX1 NULL similar to runt-related transcription factor 1 EMBV3_43706 TCTTCCAGTATGAATCCCACAGAAGCCAAGGCTGTAAAAACAGAACCTGAGAAGAAGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41363 AAAAACGAATCCAGTTGTGCAGCCCATAAGAAAGCAATTGAACTGAACCCTAAAGACGCT Variant GeneID:513788|FAM82B:NM_001037600:42_cdna 565^654 1 EMBV3_01383 GeneID:513788 14 GENE FAM82B MGC134219 family with sequence similarity 82, member B EMBV3_01913 TGCTCCGGACCTCAGCGATCCCTTCTTCTCCTTCAAAGTGGACCTGGGGATTTCACTTCT Gene GeneID:100297536|LOC100297536:XM_002690792:231_cdna Constitutive 0 NULL GeneID:100297536 10 GENE LOC100297536 NULL hypothetical protein LOC100297536 EMBV3_14763 CTACAGGTAAACCTCAGAGATAGTTGAGTTTGGTTCTAGACCATCACAATGAAGTGAGCC Gene BVT0102_127408 + 1 EMBV3_30648 GK000014.2:38543993-38554721 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053302 TCONS_00053303 TCONS_00053304 TCONS_00053308 TCONS_00053305 TCONS_00053307 TCONS_00053306 1 XLOC_031692 Coding TCONS_00053302 XLOC_031692 Coding Coding C14H8orf84 14:38552526-38562211 j TSS39348 2945 3 TCONS_00053302_2 95 0.156536502546689 4 0.696303180503924 0 0 0 0 0 2.99325218511022e-07 0 0 3.69989813785439e-12 0.00018082739626608 6.55837546935099e-12 1.42643416701354e-05 8.42400008348627e-13 9.6999304090402e-13 1.24920524468402e-06 1.86469324011918e-07 8.3141654455555e-06 4.26377998697184e-08 0 0 0 0.000604899835695721 1.03986277073898e-09 2.35584394114219e-08 0 0 0 4.70569661018915e-12 1.18314204090983e-05 2.17262688792042e-09 NM_001075869.2 SBSPON Bos taurus somatomedin B and thrombospondin, type 1 domain containing (SBSPON), mRNA. 0.0 1294 99.72 0.244821731748727 NM_153225.3 SBSPON Homo sapiens somatomedin B and thrombospondin, type 1 domain containing (SBSPON), mRNA. 0.0 1153 75.95 0.543293718166384 TCONS_00053302_2 sp|Q32L50|SBSPO_BOVIN SBSPO_BOVIN Somatomedin-B and thrombospondin type-1 domain-containing protein; 8e-66 202 100.00 0.989473684210526 0 noncoding 0 0 0 0 0.0287740619924396 0.846341668772588 0.0377633655752844 0.467834170569916 TCCTGTTTTTCCCGTTCTCATTTAGAAAGTCCCTGCCTTTATAACTACCTCTGCGTTCAACAAGGAGCGAACAAGACAGGCGGCCTCCCCACACTGGACCACAAGCACAGAGGATGCTGGATACTGTATGGAGTTCAAGACAGAGTCACTGACTCACCACTGTGCCCTGGAAAATCGCCCCCTGACCCGATGGATGCAATATCTCCGAGAGGGCTACACAGTGTGTGTGGACTGTCAGCCTCCAGCTATGAACTCTGTGAGCCTTCGTTGTTCTGGCGATGGCTTGGACTCTGACGGAAATCAGACCCTCCATTGGCAAGCAATTGGCAATCCTCGATGTCAAGGAACTTGGAAAAAAGTTCGGCGGGTAGAACAGTGTTCTTGTCCAGCTGTTCACAGTTTCATTTTTATATAGATCTTGATATAAATATTTTAAAATGTGTTTGTAAACATGCTAAATACTACCAAGTCATATTCGATGCTGCATAATCCTTTGAAAACTCTTTGGCCTAAAGTTCCTAAATGTATGTCTTTTCCACATTCTGAAGCAGAGAAAGGAAATTCAGGGGGCCAGTTCTTAAGAAACACAGTGCCTTTATTTTTATTTTTTACTATGTTGAGGACCCAGTCTAAAGTCTCCTGTAGTTTTCTGACCTTGGCCTGTCACTTGGAGTCTCCTCATTGAACAGGTAGTCCTCTGGACACAGAGTAAGTCTGTTTGCACTAAAATGACTACATTTTATTGGTCCACTTACTGGTAAGTTGTCATTTAAGGGTACTCATGCTTTGAATCTTGGGTTCTTTCTTTCTGTTCTGTAATCTCTTAAAAACTTCTTGCCTTAAAAAATGTCTACAGATATATGTACACTCACGCATGCATTTCCCATATATTATTCCACAAATTCTGCAATAATAATTTCAAGCAAATTTGTCACAAGTAATTTCCCACAGGACAAATTGTTTGAGATTTAGTAAGCAAAACCAACAGCTCTACTAAATATACCTTTTTTTTTTTTAATAGAAGAAATTTTCTTCTGTTAACTGAAAAGCGTCAATCAAATGTTCATTCTAGGTCAGTACAATTCCTTTAAATGTTTTAATTTCCATGAAGTGAAATTTTGGCAACGATAAGTGAAACAATTGCTTTAATTATGAACATTCTACCATCATTAGCATTGAAAATTATTTCCAAGGCATAAAGCCTGAAATTGACTACAATAATTTTGGAGTCCAACTTCAAGTTTAATTGAGGTAAACTTATTACTTTTTTTCCCCCCTATAGCACAGGTTTTCTTTTGTCTGGAGTAGAAGGTAGAGGCATAGATTATGGAAGGCATAGATTTATTACAGATGATATGATCCCCATCCCCACCCCAACTCTACAAACACAGAAGTATTAGTTTCCTTATTGTATGATTGGAAAATCAATGAACCAGAGACAAAAGGCCTTGTTGAAGAATCTGGACTGACAGAGCCAAATCTTAGCTTCTCATTCAGAATTTAGCTTCGATGAAGAGTCTAATGTTGCCAAAGACTGTTCTGTAAAAGCAAAGCCCTTTTTATTTCTGAAGCAAATTTTAAACTCAGAATATTTTCTTCAGAGAACTGAATCTGGAGATTTAAACTACAGGTAAACCTCAGAGATAGTTGAGTTTGGTTCTAGACCATCACAATGAAGTGAGCCACAAAATAGTTTTGGTTTCCCAGTGCATAAAAAAGTTACATTTACACCATATGTTTGCAGTCTATTGTGTGCAATAGCATTATGTCTAAAAAAAAGTACATAGCTTAATTAAAAAATACTTTATTGCCCAAAACTACTAACCATCATGTGAGTCTTTAGTGAGTAGTAATAGCAAAGATCACTGATCACAGGTCACCTGGACAAATATAATAATAATGGTGAAAAAGTTTGAAATATGCTAATAATCACCAAAATGTAACACAGACACACAAAGTGAGCAAATGATATTGGAAAAATGGCACCAAGAGATTTACTCAATCTAGGGTTGCCACAAACCTTCAGTTTGTAAAAAAAAAAAAAAAAAAAAGTAATATCTGCAAAGCACTATAAAATGAGGTGTGCCTGTATATGAAATTCCTTTGATTTCATATGTATAAAATATGATTTACTAAAATACCTATTTCTTGGCACTTATCATGTAATGAATGATATAATGACAATAGCAAGTTTAATAGGGATGGAAGAGTTCCCAATATTTAATGCTGAGAGTAGCAATATTTCTGAGAATGTATTTGTTTAAATGTCAGGACAGTTTTGGGGTAAACTAAATTCTTCATAAATTAACAATAAAAATTTGAGTCTCATCAGAGTTAGAAACTTCAACTATCAGCTCAGTATTAACATTTCAAGACCATTTCTAACATTTGTAAAACAAAACTTTTTAAGGCATACCTGGGCAATTTTCAATGTTACTTAAAATTTTATACCAGTAAATAAACTTTCTGTTCACATTTTGAAAAACTCTTGACTTGTTTGGCTAGAAAATACCGAAGTTTTCTGGACAAGTCAGAGAATAAACAAAAAATTTCACAAAAGCCAAAAGAAAACATTTTAGAATTGATAGGCATATGTATGATGACTAACAGCAATAATGCTATGATGTATTTATGGTTCCAATATGCTATAACATTCAGGATATTTGAGTTGTATAAAATCAGTTTTTCAAATTACATATTTAGCTTTCACTACATGACCGTTAATTATTTTCATATTGAAGCATATTTTTGTTATTTCTATTCTTATGAAGAATTTCAAGGGCTGGAAGACATAACTACTAAATAGTGATCTTGAAAAGCTTGTTATTACTTCTAGCAAAGCCCACAGAAACAGTACAAAACTGAAACAAACTGCAACATGTGGTCTAAATGATGAATGAAGAACCCTTAATTTTTTATTTTCAGAGATAAAGATCAAGGAATTT EMBV3_11016 AGGCAAAGGATCGGGGGGAGCGATATCCTGTATGTGAAGTTGAGACATCTGTTTGGTGGG Gene BVT0101_072566 + 1 EMBV3_10724 GK000006.2:93942981-93988623 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015596 TCONS_00205858 TCONS_00205857 TCONS_00087348 TCONS_00015595 TCONS_00138547 5 XLOC_008522 XLOC_124763 XLOC_052450 XLOC_008521 XLOC_084672 Coding TCONS_00087348 XLOC_052450 Coding Coding LOC100848332 18:60218926-60221065 = TSS64873 2139 1 TCONS_00087348_2 712 0.992052360916316 1 0 0.000442073086968519 0.000615402990760653 0.000412082932001165 0.000315433925469834 0.00024062662096488 8.36147847119853e-05 0.000239239590160616 0.000742680503946347 0.000371944202106013 0.000419336108733386 0.000152594625256306 0.000181793160875554 0.000181761343084779 9.78627575134143e-05 0.000242413888972188 0.00346042658466713 0.000731539958893054 0.00133333439912686 0.000189414485522251 0.000200322388143693 8.77556298415555e-05 0.000663141532762923 0.00122878184105077 0.00209917063168988 0.00027316631561846 0.000205862474847734 0.000268898616114899 0.000255958935358457 0.000204261107924886 0.000340103285497872 NM_001281902.1 LOC100848171 Bos taurus envelope glycoprotein gp70-like (LOC100848171), mRNA. 0.0 3844 99.86 0.999532491818607 TCONS_00087348_2 sp|P61565|ENK1_HUMAN ENK1_HUMAN HERV-K_12q14.1 provirus ancestral Env polyprotein; 2e-25 113 25.68 0.471910112359551 1 noncoding 0 0 0 0 -0.0416631463105371 0.722169133193009 -0.00435113151237564 0.962035436942678 ATGTCTCAGCCTCTCGGATACCGAGTTCCACGGCCGCCGCGACCCCGAAAGAGGAAAGGGCCTCCTCTGCCTTCGCTCCCCCCGCCAGCACGGGAAACACCACTGACATCGGAGCAACTGACATCGGGGATCCCGGATGAGCAGGGGACGGATCCGCCCACCAAACAGATGTCTCAACTTCACATACAGGATATCGCTCCCCCCGATCCTTTGCCTCACAAAAGGAGGTCAGGCCGCCTGACTCAGGCGACCCGGAATGCCTCCATACCTACTTGGGGACAAATAAAAACACTCTGCCATCAGGCACGGGGAATAACCTCTTTGCAGGGCTCTCCAACCTCCCCTGAGAAGATGTTTATTGCTATGCTTGCCTTATTATCATGCCAGGTAAGCGCCTCCTCCCCCACTCCTGAAAAGTATTGGGCTTACTTCCCAGACCCTCCAACCTTTCAAGTAGTTACCTGGAACAGTGACCCCCTACGGGTCCACACAAACCAGCCTCAGTTACTGGGAGGGTCATATACTTCCTATACCACAGACGAATATCCTATTAATTTCAATTTTACCTTCAGGGGATTAGCAGACGACCTTCCTGTTTGTTTCAACTTCCCCAGTGATATAGAAAGCTTTATTATTCCCCCTAAAGAAGGATGTGTCGGAGCCTCTAAAAAGGCAGTTCTGACTCATTCTCCAGCCTCAGGTATTGAACATAGAGGGCGTCTAGCGCTTTGGATTTTACAGGCTCGTATGCCCGGGGCCCTTGATCCCCACGAACTTATAATCCATAGACCCCCTCCTGGATATCCAAGTTGTTATAATACCGAGCCTTCAGATGCCATATGGAACACTATAGATGATCGTACAGGGTATCCGATTTGGAAATCTTGTACTTATCGTTTAAGAGCTGATTACAGAATACCGGGAGGAGGAAATTACATGATTCAAGATTGGAGTAACTCAGACCTAGATAGGAGCCCATTGCCCCTTGATGACTTTCCCAGCAGATTTTATAATTGGAAGAAAGATTTGGTTTCTTGGCCTTTAAGCATTACTAGATGGCATAATAATCGATTTGTTTCGCCTATATTGTCTTATACAACTAAGAACAGAACCTCTTGGCAGCCAGAAATTTGGAGGGCCCTTGCTGCCACCGCTCCCATTTCCTTATTCCGTCCAAATAGCAATTCTACTTATTCTGTTTTAGCTTGTGTACCCTCGCCTTATGTTTTTCTCTTTACTAATGACTCCAAAAGATTAAATGTACACATGAATTATTCAGGTGGACCTAATATTGTAACTTGTGAACAATGTATGCTTTCATCTTGTTTGACCCCGCAATATAATGTTTGTTCTTTTGTTGTGTTGAAACGCCCACCCTATCTCATGATACCTGTGTCTGTGCATTCTTATTGGTATGATAATTACGGTTTGGCTGTATTACAACAACTGCAGGATTTAATGCGAACACGACGGTTTGTGGGCTTACTTATCTTGGGAATAGCAGCTTTGATAAGTGCAATTACTTCTGTTACTGTGGCAGCAATATCATTGACTCAACAAGTACATACTGCTCAATATGTTGATTCTATGTCCAAAAATGTTTCTTTAGCATTGGCAACACAGGAAGCTATAGACAGAAAATTAGAGATGAGGGTAGACGCCCTAGAGGAAGCAGTAATACATATTGGGACTGAATTGCAGGCTTTAAAGGTGAAAATGGCATTGTCCTGTCATGCTGACTACCGGTGGATATGTGTAACACCCCTGAAAGTAAATGAGACAGATTTTGAATGGGAAAAGATTAAAAACCATATTTCAGGTATTTGGAACAGCTCTGACATTAGCTTAGACTTAGGGAAACTTCACAATCAAATAGCAACCCTGGAACACTCCCGATTAGATTTTACTGCCGCTGGAACAGCAAATGATTTCTTCCATACTTTCTCTAACTACATTTCAGGAAAAAATATTCTGTCTACCTTCCTCGGCTACGCTACCTTGGCTGTTTTAATTTTATTTCTAATAATCATTCTTCCTTGTATTGTCAGGATTCTTCGGCAGAGCATTCAGAGGCTCGCGACTGAGCTACATCTGGCTGTTTTAAGAAATAAAAAAGGGGGAGATGCGGGGAGCCGGTGA EMBV3_19101 TTGAGCTTAAAGAGCACCAGACATCTGCCTACCAGCCCCTGCATAAAGGCCAAGGGCACT Gene GeneID:511054|ZFYVE19:NM_001046072:139_cdna Constitutive 0 NULL GeneID:511054 10 GENE ZFYVE19 MGC137950 zinc finger, FYVE domain containing 19 EMBV3_30350 CTTGCTGAAGTGAGGCATGCAAGTGTCAGAGATCACAATGGCCACGCAGAGGCAGTTGAT Gene GeneID:100140117|LOC100140117:XM_002687667:7_cdna Constitutive 0 NULL GeneID:100140117 5 GENE LOC100140117 NULL hypothetical protein LOC100140117 EMBV3_08835 TGATGAGAACAGGACTGGTGATGAGAACAGGGGCAGGGATGAGGTATTATGCACCCGCAA Gene GeneID:100337391|LOC100337391:XM_002692298:1681_cdna Constitutive 0 NULL GeneID:100337391 13 GENE LOC100337391 NULL predicted protein-like EMBV3_42998 TTCGGTCTCACCAAAGCCATCGAAACCGATAAGGAGTACTACACAGTCAAGGACGACCGG Gene GeneID:537201|JAK1:XM_002686327:108_cdna Constitutive 1 NULL GeneID:537201 3 GENE JAK1 NULL Janus kinase 1 EMBV3_29456 AAGGGAGACCCTGCTGCCTGAGTGGATCCCGGCCAGTGTGGCCTGTGAATGCCAGACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24753 AGTGAGCTGCTAGGCACGGACTCTAGTGAAGAGCCTGAACTGGATGTGAGGAAGAGAACT Gene GeneID:512890|USE1:NM_001075584:59_cdna Constitutive 0 NULL GeneID:512890 7 GENE USE1 MGC140764 unconventional SNARE in the ER 1 homolog (S. cerevisiae) EMBV3_34128 GTGGTGTCAGCCCATGAGTCAGCTGGAAGAGATGTGGAGAAAGATGGAGTGGTTGACAAG Gene GeneID:618622|FTO:NM_001098142:462_cdna UTR3_Alt 2 NULL GeneID:618622 18 GENE FTO MGC139141 fat mass and obesity associated EMBV3_16435 GCTATAATGAAAATACTGTGGCAGTACAATTTCAGACTCAGTCCTCTGAAATCTGCCTCC Gene BVT0102_420114 + 1 EMBV3_15823 GK000018.2:60363261-60369490 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37053 ATCCGGGTACACGTGCCCACAGACCCACCAAGGACCATCTGCACTCGAAGCCATCACAAT Gene GeneID:532538|FBXW9:NM_001038151:47_cdna Constitutive 0 NULL GeneID:532538 7 GENE FBXW9 MGC134310 F-box and WD repeat domain containing 9 EMBV3_36019 CATCCATGCTGGGTGACAGGCTAACAGCCATGTTTTCAGTCATGTGGATTGAATAGACTG Gene BVT0102_044570 + 0 NULL GK000030.2:126939883-127191568 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245683 TCONS_00245684 TCONS_00245670 TCONS_00245671 TCONS_00245669 TCONS_00245679 TCONS_00245672 TCONS_00245674 TCONS_00245680 TCONS_00245673 1 XLOC_150796 NonCoding TCONS_00245670 XLOC_150796 NonCoding NonCoding - X:126983923-127032789 - TSS184372 1812 3 TCONS_00245670_1 53 0.161699779249448 3 0.96297963777755 0.00291551523801204 0.00218665737402564 0.00168506103712882 0.00338676259229477 0.00100590874431894 0.00097812788136932 0.000239104778572259 0.0026423872147742 0.00274224786077284 3.28255935599899e-05 3.42742242624707e-05 0.000126884890795167 0.0005543787527638 0.000488580134331832 5.07998863675002e-06 2.75721068115793e-22 0 0 0.00381470323105952 0.00303468605500711 0.000364847005597116 2.49929633907619e-08 3.55338841653179e-46 0 0.000913006528608921 0.00251268176486283 0.00216506634395168 8.53040328418233e-05 1.58930913307143e-10 2.42232579303849e-08 0 noncoding 1 1 1 1 -0.467782233250792 0.0542080674329146 -0.296037822887458 0.000834484538030729 CAGAGTCATGGGCCTTCAGGCCGGGGTCAAGAAGGGGCCTAGACTTGGGCCTTTGCTCGGCGCTCTGGCTCCCATGCTTTGTCCCTTCCTGGGCTCTTCACTGCACACACTGCTTCCTGTGGGACTAGGGGACTTGGGTTTTCCTGGCTCACTTTCTTTTGGAAGCTGAAGGGGAGAAGGAGTAACTGGCTTAAATTTCATTAGCCTGAATGGAAGGAAGATAAAGTGGCTGTTGAGTTAACAGATGGACAAGTTGGAAAGAAAGGACGTATTGCTGATCTCATCTTCTGCTCAGGAATGACAAGCAAAGAGTTTGCATGGTTAGCACTGGAAGGGACCATCAAGCCATCAGCAAGTCCCAAAGTGTTTGTACCCTGGAATCCACTTGAGGAGCTTCCAAAATGACTGACGCTTGCTTGTATCCCCCAGAGATTGTGTTGTAATTGGTTTGAAGTGTGACTTGAGTGTTTACTTTAAAACATTCCCTGGGTAATTCTAGGGGAAACAACTTGGGAACCACCAGTCTAAAACAGGAATTGGCAAATTATGGCTTGGGGGGCCAAATCTGGTCCGTTGCCTGCCTGTCTTTGGATAACCTGCAAACTAGGAGTGGTTTTTACAATTCCAAATGGTTGAAAAAAACAGAGCCCAGGAAGAATATTACTTGATGACAGCTCTCTCTAATCAGTGGTCCTACAAGACTAGCTCCTAGGGAAAAGGACAGTGTGGTAACTGATTTTATGGTCACTATATTTGATTGTCTACTAGCATGTCAGGTCAGACACTTAATGTTGAAAAGATGAGTAAAAGCAACCTACCCACATCCTTGCTTTCTCTTCGCAAAAACAGAAGCATAATTGAGTATAAGAAGAAAGAACAATAGCTTTTGCAAAGCTTTTGCAAAGTGAAAGGAGAGGAAGGAATTTTCCAGTGTGTTTCTTTTCAGATAGTCTTGTGTGTACATGTGCAGTTTAGCTGCAGCAGTGCTGGAAAGCATAGTTCTCTATGACAAAAGCGTTACTGTGGATTTGTCTAGCTTCTCCCGGTGGAGGGGGGAGGGGTAGTAGATGGGTCGTCTTGAGAAAGTTAAATTTATGGTGGCCTATATTTGTTTCCTCTCATTTGTATGAATGAATTACAGGAACAGGCACACAGTGTATTTGGCTTTGAACTGTATAGGCAGTGAAGTCATCCATGCTGGGTGACAGGCTAACAGCCATGTTTTCAGTCATGTGGATTGAATAGACTGCATAGTTAGTTAAATGCCCCTGGAAACATTGCACGTTAGTTGACTGGTTCAAAACCTCTTCTTTATTCCATGGCACCCTTCCATCTATAACACTCCTTATAAAAACTCTGAAATGCAAATAGGCTTAAGGATTTGGTCAAAGGAAAAAGCCAAAACAGAAGTCTTCCCATTATACAGCTATGTACACAGTGCCCCTTCTCTCAGATGCTTCATTATTTTAATTCCAAAGTTCTCAGCGACCTTGCAAATAAATAAAGCCTATTGAATCCAAATTGAATCATCAACTTATCTGCAGTCAAATGAGCATGTGACATTGGTCTATAAATAAGTGACCGGCATTAGTGGATACAATAAAACTGGTAGGTTCAAATATGCTTAAAAACCTAGCTCAGTGTGATCTCTGAATTTTGTGTACAAATGATTTCCTTGGAAGCCATGCTGTTTGTCTTTGATTCCACAGTCTGCTGGAGAAAGTGGCCTTGACTTTTAAAAAGGGGTTTTGGCTAAATATAGTCTAGCGTTAAATTTTAAATATCTTTTTCTTTTCTGAAAAGGATGAATGT TCONS_00248283 r 5' 44042 TCONS_00248283 r 5' 44042 EMBV3_22209 AGCCACCGCCAATGCCACTCATACCCACACAGCCACCTCCATTTCCACCCCCACCTCCAT Gene GeneID:507706|LOC507706:XM_002687877:169_cdna Constitutive 0 NULL GeneID:507706 5 GENE LOC507706 NULL similar to complement component 1, r subcomponent EMBV3_40724 CCTCTCGGCTCTCCTTTTTCTAAAAGTGAGGTTGAAGGAAGTGAAGACTGTCACTGGCTC Gene BVV0102_138512 - 1 EMBV3_09721 GK000001.2:119290652-119308049 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005038 1 XLOC_001164 Coding TCONS_00005038 XLOC_001164 Coding Coding RNF13 1:119160733-119292742 j TSS2496 4265 1 TCONS_00005038_6 353 0.0332942555685815 9 0.967759529725471 1.29736942048176e-05 0.000162010744994406 0.000115312793789847 1.33405633598605e-133 0 1.74362051899123e-06 5.63833041678705e-05 6.83026064940603e-05 0.000119899208948116 6.1416027060791e-05 5.02476440603767e-06 3.46931717687095e-06 9.58430991256628e-06 0.000119719039856047 9.35770333842361e-05 0.000167001463793605 2.5696765768084e-155 0.000414552386824749 0.000243494176790715 1.73617240342099e-05 2.23566008399061e-293 9.71370077869014e-05 0.000361697810670069 0.000352670600507012 0.000228245917088804 9.61714120197159e-05 0.000116843064021022 5.66953327933815e-05 9.67926693612229e-06 0.000139967500930939 XM_005201813.1 RNF13 PREDICTED: Bos taurus ring finger protein 13 (RNF13), transcript 0.0 3528 100.00 0.458382180539273 XM_005247090.1 RNF13 PREDICTED: Homo sapiens ring finger protein 13 (RNF13), transcript 0.0 2430 87.41 0.458147713950762 TCONS_00005038_6 sp|Q0VD51|RNF13_BOVIN RNF13_BOVIN E3 ubiquitin-protein ligase RNF13; 0.0 666 92.89 0.997167138810198 7 coding 0 0 0 0 -0.107858846903298 0.446220683444031 -0.0145779468298428 0.762320731399565 GTGCCACATTAACCCTTCATGCTCTGGAAAACCATAATTAAGATGTTTATCAACCTTACTGTCTAACCTACTTAAACAAATTAGTACATTTTCCCAATCTATTTTCTTCCAGTTTGCCTTCATTCAACACAGTGGGGAGAATAAATGCTTTTGCAGGATGTAGCACAATTCATCTAATTGTAGAATAACACATTACCTTGTTTGTAACTGAAAGAACTATATCTATTGTGATTTGAAGAGCACAATAAAGTCAGATTAAAATGTTCTGTATCCAGTGTCTTTATTTTTAAAAAAGATTTATTTGGCTGCATTAGGCCTAAGCTGTGGCATGTGGGATCTAGTTCCCTGACCAGGGATCAGACCCCAGCCCCCAACAAAGGGAGTGCAGAGTCTTAGCCACTGGATCATCAGGGAAATCCCCCAGTGTGTCTTTATTTAAAGAATGAACAAAGCTATTCTTTTTAACCTGTAAAATGTGGGCATTATTATTTTTTACTTTTCTTTGATGTCATGCAAGGAATCTCTGATTTAATATAAAGCCAGATTGAGATAATTTGATGAAAAAATGCTTACAGGGATATTCTAACTATACTTACACCTATTACACTAGCCTTCATAATACTATTCCCCATTCTGACTTTTCCTTATGACTTTCTTAGAGGCAGGACTGTTTATTAAGTATTGAATGTCTTTACAACTGATGAGAATCTAAGAATATACAGAATGTATAGTCAATGTATACACTGAAGAGGAAAGTACCTTTGATGACCTTTATTTTATTGCAACTTGATTTAGATTTTTTGGATTTAAATTTTGAGTGGGTATTACTCAAAAGGTACAAAAGTTGAAAGGCACAAAAGGATACACAACAGGGAGTCCTCCTATTCCTCAGGTCTCCCCAGAGCAATCCAGGTAACAAGCTGCAGCCAAGGGTATTCTGCAGGTGCTCCAGGGCATAACTCCCTCTCGGCTCTCCTTTTTCTAAAAGTGAGGTTGAAGGAAGTGAAGACTGTCACTGGCTCTTAGAGGCGCCTTATTTTGAAGCAGAAGCAGAGCCAGAATCCCTGGCATTCTAGATCATAACTCTTTGCAATCCTTGCAGTAAGCCCTTGCAGTTACCTCTTTACAGTGTCTAGTTGTTAACTGGCTCATCAGCGTGGATTCAATCCGGATATTCAATCCGGATAATTCAAGTTAAAAGTAGCTTGGTTTAAAACCGGAGTACTTGGGGCAAGGAAGTCTTATCAGAAGGCAACATTTTTGTTGTTGTTGTTGTTGTTCATTAAAGGAAAGAAGGGTTTTAAAAGGCTGATCTAGGGTTTAATCACACGGTTTGACTTTTGTTGAGTCTCGGGGATGGCGCGTGTCAGACCCAAAGCGCAGACGTCAGCACGGTTTCCACTCTGGCATCGGGGAACTAGTGTTCAGCCCAAGGGCTGCTTGCTCCTCTAACAAGGCGACCGGGACTCTAAGGCGCTGGCCTTGGTTCCATCTTTCTAGATCTCGGCCTGGACGTGGTGCAGAAGGGATAAGGCCTCGTCTTCGCCTCCTCCACTGGTCCGGTGAGTGCGGCACAGGAAAGAGTCGCGATGGCTCCAGAGCAGGCCCGCCCAGGGGGGAGCCCGCCAGCTGGGTCTCGGGCTCCTTCGGCCCAAACAGCCCGAACGGACTAGGCCAGCCAGCTCTGGCCGCTCGGTCCGATCCCCTCCTGACCCACGGCCTCCACTCCTGCGGGGACGCGGGAGGATTCCATAGCCAATCCCCTCGGCCATGCTACCCCTTTCCCCGCCAAAAGTAGATCCTTCTGCCTCGCTCCGCAAGCCAGCCCCACCCTGTCCTGCCCTTTCATTCCAGAGAGGAACGGTCACGAGGCCAAGAACGCGACTCCGCGCACTAGGCATCTCTCCGAGCTGGACCCGAGCAAGCAACTAGACTCCGCGAGAGAGTGGGAAGGAGCCTTAGCGGGCAGTTCTATGGCCCAATGGCTTTCCTCTACCTTCGGGTGTGGGCCAATGAGGAGCAAGGGGCGGGACTTCCGCCTCGCCTTCGGTGTTGTCGTACGCGCTCTGACTCTAGGCTGTGGGGGTCGGTGCGGAGATTCAGTCATGAAGTCGGGGTAGAGACTTCTGCAGCGACGCGGCTGGTTGCCTGTTTGTGTTGCAAGGTCAGCTTCCAGGTGATTTTACAGCGAGATGCTGCTCTCCATAGGGATGCTCATGCTGTCGGCCACACAAGTCTATACCATCTTGACTGTCCAGCTCTTTGCATTCTTAAACCTCCTGCCTGTAGAAGCAGACATTTTAGCAGGTTTTTTGATTAACTCAAAACCAGAGAATGCCTGTGAACCCATAGTGCCTCCGCCAGTAAGAGATAATTCATCTGGCACTTTCATCGTGTTAATTAGAAGACTTGATTGTAATTTTGATGAAAAGGTTTTAAATGCACAGAGAGCAGGATACAAAGCAGCCATAGTTCACAATGTTGATTCTGATGACCTCATTAGCATGGGATCCAACGACATTGAGGTACTAAAGAAAATTGACATTCCATCTGTCTTTATTGGTGAATCATCAGCTAATTCCCTGAAAGATGAATTCACATATGAAAAAGGGGGCCACATTATCTTAGTTCCGGAATTTAGCCTTCCTCTGGAATACTACCTAATCCCCTTCCTTATCATAGTGGGCATCTGTCTGATCTTGATAGTCATTTTCATGATCACAAAATTTGTCCAGGATAGGCATAGAGCTAGAAGAAACCGACTTCGTAAAGATCAACTTAAGAAACTCCCTGTACATAAATTCAAAAAAGGAGATGAATATGATGTATGTGCCATTTGTTTGGATGAATATGAAGATGGAGACAAACTCAGAATCCTTCCCTGTTCCCATGCTTATCACTGCAAGTGTGTAGATCCTTGGCTAACTAAGACCAAAAAAACCTGTCCAGTCTGCAAGCAAAAAGTTGTTCCTTCTCAAGGCGATTCAGACTCTGACACAGATAGTAGTCAAGAAGAAAATGAAGTGTCAGAACACACCCCTTTACTCAGACCTTTGGCTTCTGCCAGCACTCAGTCATTTGGGGCTTTGTCGGAATCCCGCTCACATCAGAACATGACAGAATCTTCAGACTATGAGGAAGATGACAATGATACCGACAGCAGTGATGCAGAAAACGAAATCAATGAACACAGTGTTGTGGTCCAACTGCAGCCTAATGGTGAACGGGATTACAACATAGCAAATACTGTTTGACCTTCAGAGGATATTGGGTTATTTCCTTTTAAAATGTTTATTTAGGCATATAGTTTGATTTTTTTTTTTTTTTGCTCCCTTCAGAGATTTCTGTAGAGATAATTTATTTTTTATTCTACAGGTTAATCGAGATTACTGAAACAGGTTGTTTTGATCTGGTATTTATCTGCAGGAGTGTACTTCATTTCACTAATAATAGACTGGTGCTGTAACTCAAGCATCAAATCGACTCTTTTGGAATGAAACGTAGCCAAACATCAAGAGATTCCTCAGTATAGCTTGCAATTAAGACCTAGATCACAGTATGCACACGTTTCATGTTTTTACACACAGGGTCAGTGCTGTGGCCACCGAGCATGAGCTGAGCCAACTCCCATCTCCATAAAGTTACCTAGAGTTGTTGAGCTGGAATATGCTTGTTCTGGTATTTGTCCAAATTGCCATAATTAGCAAGAGGCGACTATCAGCACCACAGAGAAAATCAAAGCTTTTTCCTTTCTATTGCCAAGTAGTCTTACCCTGATAGGAACAGTCAGTACTAGGGCAGTTTGCAAAATGTTTTTATTTTTAAGGCTTTTAATACTATAGTGTCATGTATGAACTTCATTTATCAGCTGAAGTAATGTCTCTGACTTTACTTACTGAATTTCAGTATCCTTAAGGATTCTGTGTGGTGATCAAAACATAAACAAAATGCTGTATAAAAATACCAAACTTCAGTAATTGTTAATACTCAGATTATATACCTCTTAATAAAGAGCATCCTATGCTTATTAGCCCTGCTAAACTGTGTACAGAGGAAACTGTTCAAGTATTGGATTTGAAAATGTTGCTTATGTTTAACAGAACTAATGATGTATTTAAACAATGTATTATGAAAAGCTAAATTACACATTGTTAACTATGTAGAAAATATAGGCTTATATATATATAATCAAAATGCTAAGAATTTTTATATGGCCTTGTATGAAGGGAGTTTGAATGTTAATAAACACGTTTTCCACTTTGTTT EMBV3_09455 TCAGCAGAAACTCTACAGGCCAGAAGGGAGTGGCAGAATATATTTAAAGTAATGGAAGGG Gene BVT0102_264189 - 1 EMBV3_40776 GK000030.2:101170125-101217310 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251406 1 XLOC_154347 NonCoding TCONS_00251406 XLOC_154347 NonCoding NonCoding - X:62780120-62781900 - TSS188627 1780 2 TCONS_00251406_3 158 0.987640449438202 1 0 3.95830784729298e-06 2.31856892500819e-06 0 0 0 0 0 0 4.92517995842686e-06 4.6230279538737e-06 3.9750899497554e-06 7.40065881222372e-05 0 0 2.75629130478535e-07 0 0 0.000296016227993526 0 8.08026687603529e-07 1.70546963300432e-06 4.16891911778565e-06 5.92704927619562e-05 4.70918023230977e-05 0 9.89532786667766e-07 4.11457098987775e-07 1.07923391179921e-05 0.000114546761729127 0.000104707621798162 XM_003586954.2 PPFIBP2 PREDICTED: Bos taurus PTPRF interacting protein, binding protein 2 (liprin beta 2) (PPFIBP2), mRNA. 1e-90 338 74.35 0.300561797752809 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 4e-28 131 68.17 0.223033707865169 0 noncoding ATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCTCGATAAAGGACAGAGATGGTATGGCCCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAATAATACACAGAAGAACTGTACAAAAAAGATCTTCATGACCCAGATAATCACGATGGTGTGATCACTCACCTAGAGCCAGACATCCTGAAATGTGAAGTCAAGTGGGCCTTAGAAAGCATCACTACAAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGGACACGACTGAGCGACTGAACGGAACTGAGATGAACTGAGGTCTGAAGTGGGTTTCTTGTAGACAGCATATATATGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTGTCTTTTGGTTGGAGCATTTAATCCATTTACATTTAAAGTGATTATTGATATATATGTTCCTATTGCCATTTTCTTAATTGTTTGGGGTTGATTTTGTAGATCATTTTTCTTGTCTTGTATTTCTTAACTATGTAAGTCCCTTTAACATTTGTTGTAAAGCTAGTTTGGTGGTACTGAATTCTCTTAACTTTTGCTTGTCTGAAAAGCTTATTTCTCCATCAATTTTGAATGAGATCCTTGCTGGGTACAGTAATCTTGGTTGTAGATTTTTCCCTTTCATTATTTTAAATATATCCTGCCATTCCCTTCTGGCCTGTAGAGTTTGTGCTGAAAGATTAGCTATTAAGTGTATGGGGTTTCCCTTGTTTGTTACTTGTCGCTTCTCCCTTGCTGCTTTTAATATTCTTTCTTTGTGTTTAGTCTTTGTTAGTTTGATTAGTATGTGTCTTGGTGTGTTTCCCCTTGGGTTTGTCCTGTATGGGACTCTTTGTGCCTCTTGGACTTATTTCCTTTTCCATATTGGGGAAATTTTCAACTGTAATCTCTTCAAAAATTTTCTCATGCCCTTTCTTTTTCTCTTCTTCTTCGGAGACCTCTATAATTGGAATGTTGGTGAGTTTGATATTGTCCCAGAGGTCTCTGAGACTGTCCTCAGTTCTTTTCCTTCTTTTTACTTTATTCTGCTCTTCAGAAGTTATTTCCACTATTTTATCTTCCAACTCACTGATTCGTTCTTCTGCTTCAGATATTCTGCTATTGATTCCTTCTAGAGTATTTTTATTTTCAGTAATTGTGTTGTTTGTCTCTGTATGTTTATTCTTTAATTCTTTTAGGTCTTTGTTAATTGATTCTTGCATTTTTTCCATTTTGTTTTCAAGGTTTTTGATCATCTTTACTACCATTTTTCTGAATTATTTTTCAGGTAGTTTGCCTATTTCCTCTTCATTTATTTAGACTTCTGTGTTTCTAGTTTGTTCCTTCATTTGTGTAGTATTTCTCTGCCTATTCTTTTTTTTTTTTTTAACTTATTGTGTTTAAGTTCTCCTTTTCCCAGGCTTCAAGGTTGAATTCTTTCTTCCTTTTCGTTTCTGCCCTCCTCAGGTTGGTCTAGTGTTTTGTGTGAGCTTCGCATAGAGTAAGATTTGTGCTGAGTTTGTTTGTTTGCTTGTTCGTTTTTCCTCTGATGGGCAAGGCTGAATGAGGTGGTAATCCTATCTTTTGATGACTTGGTGTGCATTTTTGTTTTGTTTGTTGTTTAGATGAGGCGTCTTGCCCAGGGTGCTACTGGCAGTTGGGTAATGCTGGGTCTGGTATTCAAGTGGTCTCCTTTGTGTGAGTTCTCACTATTTGATATTCCCTAGGGAAGGCAATGGCACCC TCONS_00244585 . 3' 30152 TCONS_00244585 . 3' 31931 EMBV3_15246 GTCTGACTTCCAGTTCATTGACCCAATTCTGGGCTTAGCTGGTCTAACAGGCAAGTGTTC Gene BVT0101_009883 + 0 NULL GK000011.2:10869030-10875795 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026919 TCONS_00024059 TCONS_00024071 TCONS_00024068 TCONS_00024070 TCONS_00024069 2 XLOC_015146 XLOC_014427 Coding TCONS_00024068 XLOC_014427 Coding Coding TPRKB 11:10862326-10873739 j TSS17749 4822 1 TCONS_00024068_2 198 0.346744089589382 5 0.577900455660708 0.000484678325919276 7.38157995942473e-05 9.4953102658018e-05 0.000113227915742437 0.000275933799503568 0.000162974272489976 0.000113370881455315 0.000264422936983191 6.08220559062505e-15 3.4571868745029e-06 1.75353540164818e-06 3.40525355250081e-06 1.23743556335874e-06 4.02940227833717e-05 4.21488089135745e-24 0.000147925119134665 2.39458336075918e-08 9.44641593210025e-06 0.000232656664579788 0.000101318761650751 0.000231779580656851 0 2.62730391100257e-05 0.000116103592469885 7.41236868297478e-15 0.000177275300936239 0.00014124092353688 2.27455999414271e-06 3.03607499855412e-11 6.4843919102271e-05 XM_005212500.1 TPRKB PREDICTED: Bos taurus TP53RK binding protein (TPRKB), transcript 0.0 4715 100.00 0.54189133139776 XM_005264344.1 TPRKB PREDICTED: Homo sapiens TP53RK binding protein (TPRKB), transcript 0.0 659 90.78 0.0982994608046454 TCONS_00024068_2 sp|Q9Y3C4|TPRKB_HUMAN TPRKB_HUMAN TP53RK-binding protein; 3e-93 274 90.48 0.737373737373737 1 coding 0 0 0 0 -0.242941020555403 0.325229462967537 0.0320869894358891 0.541849793273656 CGACGGTGAGTACTCCTGGCACCACAGCCCTGGCCGGGTCGGGCGGGAGCTGGAGACCAGTGATTTTCCAGATGATACCTGTGATTCTCGGCGCCCTCGTTTATCGAGCGTTTGCCAAGGTCGGGTCCTGGGATGCAGCCCGGCAGTGATCGGCTCAGCCTCCCTTCGAGGGCGGACGATACAGCATTCTGATGAGCCTGAGACTCACCAAAGTTGTAACAGAGGAGGTCGTAGGAGACTGGTCCTGGGGTCCTGGGAGCGCTGTAGCATCCTGCTTATCTATGAAATGCAGTTAACACATCAGCTGGACCTATTTCCTGAATACAGGGTGACCCTTCTGTTATTTAAAGATGTAAAAAATGCTGCGGCCTTGAGAAAAAAGGCCATGGAAGGTGCCATTGATGGCTCATTAATAAACCCTACAATGATTGTTGATCCATTTCAGATAATTATGGCCGCAAACAAAGCAGTTCACCTCTACAAGCTGGGGAAAATGAAGACCAGAACTCTATCTGCTGAAGTTATTTTCAATCTTTCCCCAAATAACAATATTTCAGAAGCCTTGAAAAAATTTGGTATCTCAGCAAATGATACTTCAATTCTGATTGCTTATATTGAAGAGGGTGAAAAACAAATAAATCAAGAACACCTAATATCTCAGGTAGAAGGTCATCAGGTTCCTCTGAAAAATCTCCCTGAAATAACAAATATTACAGAAGTCAAAAAGGATAGCTTCCCTGAAGTGGAATTACTGGGGAAGAGGATATGGATTTTTAATACCAGAACGGCGCCACTTCACACTTGTAAGAGCAGTGCACAAGTGTGCCAGTCTCAGCACTCACCAACAATGCCTTTAAACTTCTCAACATTTTCGCCATTTTGAAATGTCAGACTACTGGTGAAGCTGAACTATGTTTATTTGTTATGAAGTGTTTTGAAAGGGTTTATACCTGTAACTATATAGATTTTTTTTTAACTCTATGAGCCTTTGGGTGAAGAAGGAAAAAGAAGTAATGCCATTTCCTGGGAAAAAAGTTAACGTAAGGTCCACAAGCTTTTTCTCTTAAGAAAGTTGGGCCAATTTAGGAATAATGTTCTCTTTCTTCTTAAATTAACCAGTTTGCTTCAGAGCTTAAACGCTTCCCCAGCAAAAGCAACCAGTGATTATAGGGCCTTTGATGCTGGAAGAGAAGGGATGCAGTGTGGCAGGCCACCCTCAGTTGGCTCCTTGGTCAAGGGTTACAGGGTTATCAAGGGATACTAAGGCTGTTAGCCAGCTGTCGCTAGGATAACATGAGGAAAGGGGGCTCTGTCACCCAGGCAATCGTTGCTCCCCATCTCCCCCGTCTTGGGAACAAGGAAAGCTGCTACGAGTGGCAGAATCTTTAATCCCCTGCCCTTCTCCCCACCTCACACGGGAAAACCACAAGAACGCACCTAAGCACCGTGCTTTCTTTTTAGAAGGAGCCCTGGGGCTCGCAGACTTTTTCAGGCCACCTGCTGCAATTCTCATTTTCGCTTTTTCCTTTGATGACCTTTCTGCTTGTCTGGAAACCTGGAACCTGTGCTAGGGCTGCGGCTGCTTCTCTGCACCTGGTTTTGTTTTGCTGACTGCTGTGCTATCTGCACTCCGTGTTACAAAACTGAGTAAAGCACAGCTCTGTAGGTGATTGGTCTCAGGATGAGCCAAGTTTGTATTGTTTTCATAATCCTCTGTGCCAGTTATCTGCCATTGTTCCCTCCAGCTCACTCTTCATCCTTCTCCACTTCTCTCTGCCCTGGACGCTGACTTACCATGTACGTCCTCCCTTCCCCTTGGCTTCTGCTTGGGTTTGGCCAGTGTGTGGGGTGGAGAGGCTAGCAGGAGGATGAGGCCAAAGGTATTTCTTTTCCTGGCCCCTCACTGCAAGGATCCCTAGGCTGGCTTTGGCTTTGGACCTCTCAGGGTGGTCCTTGCTACTCAACTTCTGGGTCAGGGTCCTGTCCCCTCACCCTCCTGCCTCACTTCAGGCCTCTTGAGCATTAACATACGTGGTTCCCCTTTACCCACCCACACCTTCATAATTAGGCCCTTTGGTGATCTATATAAAATGAGCTTGGGTTATCCTAGTTTGAGTGTTGGGGCCTGATAATGCCTCCCTTTTGTTAAAAGGTTAGATTAGCAGTATTTGTATAGAGCTGGATCATTGTTCCAGTATCTCTGAACATCTTGCCAAGGAGTGACCTATCGGACCACTTTCTTTCCTCTTGAAACAATTTGCTGTTACTTCCTCTCACTCATGTCCTTTAAGTTATGAGTGCTCAGTGGGAATCCAGGGCACTGACCTGAGGCTGGCTTACTGGGAACCCTGATGAAGAGATCAGGGGAGATGATGTTCTTTCCAGGACATTTTCCTCCTCTTTCTGAGACTTCCAAAACATGACACCACTTGATTGTCTGACTTCCAGTTCATTGACCCAATTCTGGGCTTAGCTGGTCTAACAGGCAAGTGTTCTTCATAAATGCAAGCATAGGGTTTCATTGACATGCTGCTCTCAAGTCCCACAACTCTGAGAATAACAGTGATTTCAAAAATATAACTACCTATTATAATCAGGTTCCTATGGGTAATAGAAAAATTAAATAATTTATCAGGTCACTAGTAACTGTTTAACTGTTAATACGTTAACAGTTTTTAGCAAGTAACAAATTAACAGCAATATAAGTGCTGGATGAGAAGTGCCAAGTCTTCAAAGGAGGGAGCGGATACAAGATCCATCTGGTTGTCAGGGGTCAGAAATCTTGATGGAGGAGGTAGCACTGAGCTCAACCTTGACCCTGTCACATACTGGATCTGGGTCAGTATGGCCTGAACGTAGGTGCGTGATGAGGCTTAGAGGTGAATCTTGCATCCCAGCAGACAGCTGTTTCTGTTGGCATACAGAGCTTTATACTAATTAATAATTCAAACACTTGTCAGATACCTGTCTTTTGGGGTCAGCATGTGGTACTGAAAAAGCAAAAAGTTCAGGCCTTCGAGTCAAAACTGCCAAGGCTTGGGTTCCACTCTCTTGGGTAGGAGATCTCAGGCTTGTGAGCCTCGGTTTCACATTTGTAAAATGGAAGCAATATGAGCCTTAGCTCTTAGATGGTTGTGAATGTCAAATAGTACAGCACAGGAAAAGTGCTTTCTCACAGAGCCAGGTATCTAATATCTCAGCAAGTGACAGCTGTCTGTGTGTACCGGGCATAATACTGAGGCATACAGTAGAGTAAGACTCCCTGCTGCCAGGGGAGTAAAACTTAGCATAGCAGTTTGGCAGCGCCTCCAGCTGTTAAAGTGGAGTTACCATATGACCCAGCAATTGCACTCCTGGATATATACCAGAGGAACTGAAAACACGTGTTGAAACAACCACTTGTGCAGAATATTCACAGCAACACTATTCACAACAGCCAGAATGTGGAAACAAGTGTCCACCAGCAGATGACTGGATAAACAAATGATCTATCCTTTCCATGGAACATTATTCAGCCATAAAAAGCAATGAAGTACTGATGCCTGCTAGGACATGGGTGAACTTTGAGAACCAAAGTGAAAGAAGCTAAAGATAAAAGTTCACATATCGTGTGATTCCATTTAAATGAAACATCCAGAATAGGTACGTCCAAAGAGACAGCAGGCTAGTGGTTGCCAGGGGTGCAAGAGGGGTGGAAATGGAGTGGCTACCCACTGACTAAGGGGTTTCATTCTGGGGTGATGAAAATGCTTCAGAACAAGACCGAAGTGGTGGTTATACAACATTGTGAATGTCCTAAGTACCACTGAGTTGTACAAATGTGAATGGTTAATTGAAAATACTAGAATAACACACCTGCCTTACCTTCAGGAATTCACAATCTTCGATGGGTCTGTTTAGACTGACTCTCAAGAGTTGGCTGAAGTACATTTGCAGCAATATAAATGGACCTAGAGAATATCATGCTAAGTGAAGAAAGTCAGAGAAGGATAAATACCATATGAGACCGCTGGTATGTGTATCTAAAATAGGACACAAATGAACTCATCCACAGAACAGAAACAGAATCAGACTTGGAGAATAAACTGTGGTTGCTATGTGGGAGAGGGAGGCAGTGGGGATTTGGAATTAGCAGGTGCAAGTTATCATACACAGAATGGATAAACAACAAGGTCCTACCGTATAGCACAGGGAACTGTATTCAATATCCAGTGATAAACCACAATGGAGAATAGGAAGAAGAATGTATATATATGTATAACTGAGTCACTTTGCTGTGCAGCAGAAATTAACACACTCTAATTCAATAAATGTTTTTAAAAAAGGAGTTGGCTGAGGCAGAGACAGGTAGATTCCCAGGCCTGTTTCATCATTTGAAAGCAGGGTCAAGAGCCTGCAATGTGCTGGTTTCCAGACCGGTATCTCTTACACAGAGAATTACCCATAATTCCTCTACCCAGACATAAATGCTGCCAATGTTTGGTGTAACCATTCAAGACTTTTCTTTCTGCATGCTTGTGAATATAAATTATTAGTTATATTTTTTCAAAAATGAGTGAAAACATAGTTTTATCATCTTTTATAGCTTGACAATTATATTCTGACAATTATTTTTCATGTCAATAAATCCTCATGATCATCATTGATGACTCAGGAAGGTTAAAAAGCCTAAATGTAAACCAAGGTCACTGGGTTGAGGAAGCCACAGAAGTTGGTGAGAATACAGGAAAGAGAGGGTAGGGACAGACAGGGCTTCTGGCCCCCCAGCTTGACCACTAGGATCTGATTGGTTAATATTAGAGACTCATGAGGGTTACTCAGC EMBV3_02195 TTAATGAAGAAGTAACATGGTCGTTTATGCAGCTTCCTCTGCCCGAGTTCCCGCTCTCCC Gene BVV0101_008248 + 0 NULL GK000028.2:5367947-5496228 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26367 CCCAAGCTTGAGCCAGTTCCTGTTCAAAAGCCCACCAAGAAAACACATTATGGATCGTAA Variant GeneID:503621|PDLIM5:NM_001077444:5_cdna 388^497 1 EMBV3_04269 GeneID:503621 6 GENE PDLIM5 NULL PDZ and LIM domain 5 EMBV3_20859 CTGCCCTCACGGTTTTCCCCTCCTAGGTGTCTTTGCTTTCATTTAGAGAACTGTGGCCAT Gene GeneID:280832|KIT:NM_001166484:77_cdna UTR3_Alt 2 NULL GeneID:280832 6 GENE KIT c-kit v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog EMBV3_35605 CGCGGCGCGGTCCCCGGCCGACCAGGACAGGCTGTTGAAAATCCTACAGCTACAGAGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34771 ATGGCAAACGCAGCGGGGTCGGGTGGTCAGGGAAACCAACTATTGTACTTTCAAACTGTC Gene BVV0101_061371 - 1 EMBV3_16952 GK000009.2:24365793-24489458 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00239368 1 XLOC_146034 NonCoding TCONS_00239368 XLOC_146034 NonCoding NonCoding - 9:24446599-24447308 - TSS179046 709 3 TCONS_00239368_2 52 1 0 9.59500084476871e-05 1.41726948481568e-05 0.00010441737857726 4.68499840723641e-05 6.26722237090612e-05 0 0 8.34234245755058e-06 1.11285333468118e-05 0 9.6862519001717e-06 0 1.61877585877272e-05 0.000663468956896796 0 3.72518898169316e-05 4.68328837484679e-05 3.53891501460228e-05 7.07991194054919e-05 0.000324577519742756 4.70987619306624e-05 0.000387257280346163 0.000465818337465026 0.000141872853072358 0.000302937224018038 0.000149057871293118 3.30558007763224e-05 5.41899979200544e-05 6.84712816362773e-05 6.78391325665773e-05 NM_001076034.1 RSPO3 Bos taurus R-spondin 3 (RSPO3), mRNA. 0.0 780 100.00 0.607898448519041 XM_005267167.1 RSPO3 PREDICTED: Homo sapiens R-spondin 3 (RSPO3), transcript variant X1, 3e-120 435 80.46 0.668547249647391 0 noncoding 0 0 0 0 0.123876579978103 0.379200332893093 -0.0520791794615215 0.338963334886562 GGCACAGGAGCGCCGGGTCCGCCGGACTATGGCACCCAGGAAGATGCGGGGCAAGAGAGGAGCGGCCGAAAAGAAGGCGTGAAACACAGGAGCCTCAACTGTTACCTCTTCTCCAGGCGTGGGGTGTTGGGTGGGAGGACTGCCGCCGCTGTGAGCCGACTCAAGTTAAGGAAAAGCGACCCGACAGGTGAACGCGGCGGGAGGGAGCAAATGCGTAAAAAAGCCTGCACTTACTTCTTCGCTGGCGCCTTCCCCGGGAGGCGTTTTGGCTGCCGATGTATTCCATAAAGTTCAAAATGATAAAAAACCAAGAAATCAGTCGCAAGTGCATAGTAACCCAATAATGTTTCCCTTCCTTTGCTCCTTTTTTTTTTCTTTTGATTGTTAATTAAGATTGACTGTTTCAGAAATACACGTAGGTGTTAGGCGTATGGAGAGAGCAAGCGCTAACCCCAGCTGCGGACAACTTCTCCACTCAGATCCGACAGGCGAGCCGGGATGGCAAACGCAGCGGGGTCGGGTGGTCAGGGAAACCAACTATTGTACTTTCAAACTGTCCGAGCCCTGAGCTGCGGGGGCTCCCGTGCGGTGGCTGTCAATGCCGCGAGTGAGGGTTCCAGAAGCAGCGAGCGGCCTCGCCAGGGTGGCCGCAGGTAGCATGGTGCGCCGCGGCTGCGCGGGATCCGGGCGGGCGGTGGCGACGGTGGCG TCONS_00236823 . 3' 23231 TCONS_00236823 . 3' 23939 EMBV3_29701 CCAATATGGTTTTGACCAATTTGCTCTCTACAAGGAGGGGGACACCAGGCCCTTCAAGAC Gene GeneID:100336616|LOC100336616:XM_002695417:56_cdna Constitutive 0 NULL GeneID:100336616 18 GENE LOC100336616 NULL glycoprotein VI (platelet)-like EMBV3_01312 AACCCCAACTGGATGTGAAGAAGCCCTCAGAGCTGGTACTTAAAGTCAGAATTCAGAGCC Variant GeneID:512899|ANKRD40:NM_001075586:103_cdna 159^239 1 EMBV3_07058 GeneID:512899 19 GENE ANKRD40 MGC139105 ankyrin repeat domain 40 EMBV3_40765 CTCTTGGAATTCTGGGTCACTCAAGGGTCCACTTTGCTGTGGTTGTTGAAGAAGCCTTGC Gene BVT0102_083297 - 1 EMBV3_38692 GK000027.2:13691048-13754642 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155924 TCONS_00155926 TCONS_00155033 TCONS_00155925 TCONS_00155927 TCONS_00155923 TCONS_00155928 TCONS_00155035 TCONS_00155922 2 XLOC_094888 XLOC_094624 Coding TCONS_00155924 XLOC_094888 Coding Coding ENPP6 27:13745874-13766318 j TSS116590 4282 1 TCONS_00155924_1 197 0.103689864549276 4 0.790735214988015 1.25770403614756e-08 3.80023884343095e-10 5.40007628315891e-08 1.70617741167418e-20 0.000219566662258268 5.37157436235617e-10 3.59028182943992e-05 1.07116813559936e-18 1.46294376427975e-13 0.000600096304080084 0.000383969610647261 9.59687033714866e-05 4.04786732862231e-06 0 9.54635900061977e-06 0.00165964951447316 0.000707900177428969 3.99350073288884e-07 0.000307757358953935 1.27386123160442e-55 1.3080381370925e-06 2.70888314474299e-10 1.41724762878257e-05 0.000757556847847609 2.78440176148125e-11 3.81091252115929e-05 8.37568356819907e-27 9.11595083481193e-52 6.40270920001385e-05 0.000297710794689105 XM_005197176.1 ENPP6 PREDICTED: Bos taurus ectonucleotide pyrophosphatase/phosphodiesterase 6 (ENPP6), transcript variant X1, 0.0 7685 99.79 0.999766464269033 NM_153343.3 ENPP6 Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 6 (ENPP6), mRNA. 7e-131 473 83.71 0.10415693601121 TCONS_00155924_1 sp|F1N5C8|ENPP6_BOVIN ENPP6_BOVIN Ectonucleotide pyrophosphatase/phosphodiesterase family member 6; 3e-114 337 99.38 0.812182741116751 1 coding 1 0 1 1 -0.00579827887986262 0.960683261767219 0.00367291585699497 0.943825924497969 CACTGGCAGCTCCCGCAGTCGACGGCTTCTTGCAAAGAAGTTCTGTTTTGCGGGCATGGAGCACCATCCATGTCTCCAACTTGGCACCTGGACCCCAGGATGTGAGAGCATCAGCGGCTCGCGAGCTGGGAAGAGCTTCTTGCTTCCAGTGTGGTGTGTACGTCAGATATATAACAAAGTGAGGCGAGTGGAGCACATGACTGTCTACGCGAAGGAAGACATTCCGAGCAGGTTCTATTACAAGAAAGGGAAGTTTGTCTCCCCTCTGACCCTAGTGGCCGATGAAGGATGGTTCATAACTGAGAATCGAGAGTCGCTTCCATTCTGGATGAACAGCACCGTCACCCGCAAGCCAGAAGGCTGGCAATGGGGCTGGCACGGATACGACAACGAGCTCAGAGCCATGAGGGGCATCTTCCTGGCCTTCGGACCTGATTTCAAATCCGACTTCAGAGCCGCTCCCATCCGAGTCGTGGATATCTACAACCTCATGTGCAAGGTGACAGGCGTCACCCCCCTGCCCAACAACGGGTCCTGGTCCCGGGTGATGTGCATGCTGAAGGACCCAGCCAGCTCGGCTCCGGGTGCCCCGCCCTGCGCCTGTGCACTGGTCACCGTCCTGCTGGTACTGCTGGCGATACTGGCCTAGCTGCTTGCGGCGTGTCCCCAGCACTCCGCACAGTGGGTGAATTAACCACCTCGATTCATGCGAAGACATACAACTGTTAATCTATTCTTGGATGATTCCATACACAAAAGTCCCTATTTCTTTAGATTTTTTTTTTGTTTATATTTTCTAGAGGTAAGGAAAATTTTAGCTTTTCATTTGTTCAACTATAGGTTATTTTCTTCTTCTTTTTTTTTTTCTGATGTACTCAGATGGCTTGTCTGAACAGGGCCTCCCGCTGTAGTGACCAGACCCCAGGTGGGTATTCTATGGAGTCCTGGTCCCTCTGTTTTGCACAAAGCAGGCTCTTGTCTAGGGTCTGTCTACACCTGGGAGCCATCCTGTACAGCTCCTTCCATCAGGGGGAAAACGGAGGCCCATTTGAAAGCAGTAGCTGCTGTCTATTTCTGACCCAGCTCGTGACGTTTCTTCACCTTATACAAAGTCCCAGAAAGGGAGTATCTTAGCTTGGCTCACCCATCAGTCAAACTCACTAAGAATTGCAGAATTCAGAGAACAAAGTGAAAGATATGGGTTCCTTCCCAAAGTCTGAGTACACAAAATTTTCTCCCTGGGTGGAGGAGCAAAAGAGTTTACCATAGATACGGGCTTCGACAAGCCTTCTCCTAGCATGTTCGCGGTGTGAACACACAGGACAGGAACTGGATTGCCCGTCTGCCCATCTGCCTGTGGGAAGGCTGACTCAGAGGATCCCATATAGAATGTGAGCGCGTGCTCAACCACTTCAGTCATGTCTGACTCTGTGCAACCCCATGGACTGTAGCCTGCAGACTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTACTCTAAGGAATCTTCCCAACCCAGGGATCAAACCTGGGTCTCTTACATCTTCTGCGTTAGCAGGTGGGTTCTTTACCACTAGTGCTACCATAAACTCCAGCAACACCGGACATATCATCTATCATCACAGGTGGGGAAAGGGATGTCCGGCTGAGGAGTGTGGACATACTTGCAGAAATCTCACTCCATTGCTTGAAATGGTGACGTATTGAACATAAGTTTGATGCTCCTGTGTCCCTGAAAGCAAGGCTTCTTCAACAACCACAGCAAAGTGGACCCTTGAGTGACCCAGAATTCCAAGAAAAATGGTGCAGCGCAGGGAACAGACTCAGCATGATGCAACTGAATCCCAGTCACTAACCACTTGGCCATGTGATTAGGTAACAGTTTGGGCAAAGTGACACCTCAGAGACCTTGGTTTTTAAGAAACCCCAAAGAAGAGGCACTGAGCCTGAGTTGAAATGTTTTTAGTCTTCTAAGTCTGCTATAGGAGATCTTGTTGCAAGACAAGGGATACCTATACTTCTATATGATCAGAGTCACAGACATGTATCACTGCATTAAAAATGAGTTTGCACTAAATGAAGCCCACCTGCAGATGAGACTTTTCATCAAGAAAAGACAACACATCAGGTCTCACCAGGACAATAAAGCCTCAGACAATAAACACTCTGCTTATGTGTTGTTTACCTTGAAAAAATGAAAATCTACGCTCACCCTGATTCAAGAAGTCTGGGAGCCATCTCCAGACCTTGAATCATGAGAGCGAAGGATCACTGCTTAAAAATACCACATTTATCTTCACAAAAGATTTCTAAGGTTTTATGTAATGTGTTTTTAAAGTGCTAGCAAACCTTCAAGTCAATAGGAAAGGCAAATCAGCCTTTGTTATCTGTCTGAAAGCCAATTAGTGCTTTGGGAACACTGTGGTGGTTACTGAAAGAGCATCTATTGTTTGAAGTTGTCTTTCTCTGTAAAGGACTGTGTTCTAATTAATGCGGTGGAGCTCATTGTGCTCCCATGTGAAGGAAGGAGCCCTAAAAGAAACCCAGTGATTCAACTAAAAGTGGATTATCCAAGTCTAGAGGGGTACGAACAGATATACGGTCTTGAGTTTGTCCTTCCCACTCTGTTCTACCAATTTTTCCCCTCACTCATTTTTAAAATCTTCAAGTTACATAGTAATATCTCAGACATTTGCCTGACAAGGTGTAGTTACTCTGTAAGTGGTTTTGAAGCTCCAGTACTTCGCCCACCTGATACAAAGAGCTGACTCTTTAGAAAACACCCCGATGCTGGGAAAGATTGAAGGAAGGAGAAGGGGATGACAGACAATGAGATGGTTGGATGGCATCGCCAACTCAACGGACATGAGTTTGAGCAAATGCTGGGAGACGGTGAAGGGCTGGGGAGCCTGGCGTGCTGCAGCCCATGGGGTCGAGAAGAGTCGGACACGACTGAGCAACTGAACAACAACAAAAATGAGAATAAGACACTTTGGAATCATAAGTATTGGTGATTAATAAAGAAAATTCAGACACTGAATGGAGGAAAACCCTTAAACCTAAAGCAATACATATGTTTTAGTGGCTTAACTGTTTAGCTAGAATTTTTTCTTTTGATTTTTGTTCTAACTTATGTTCTTTTCCCAAGGAAAATTCTACTTTTTCTAAACGCATTTTGTTCCATCAGAGTAACATTTGCTAGGACTATACACACAATTTTCCTCCTATTTTACAACTTCATCGCTAATTCCGGGAGGAAGTTCATTGGACTGACCTGAAAATACCAAAGACAGGTGAAAGGCGTGATGTTTAAGTTGAAGACAAGATGAATGGCTACTGCCTGCCTGTATGCAGAATCACCCGAACCCAACTCAACTACGTTCTGAAGACTTCAGCATAAATTAGAGCAGGCCCAGGGAATTCTTTCTCACCTCCAAGAGGCCTGATTTACAAAGTCCCAACTCTCTTTACTTTTAAAGGGCTCTTCAAAAGCCACAGCACATCTGAATTGTCATAGACAGCAGTTTGCAAACCTTCTGGGATGGCCAGCATCCCTGGCCCTCTTCTGGAGATGCAGGTTCTGAAGACCTGGCACGGGGCCTTCAACAACACTTTTAAGTCACGTGGATCTAAGGTCCGGGTTTGCCCTAAGGAGTGGTGGGTTCTGATTTGACTTTGGTAGACCCGAGGCTCCCACAGCAACTTCATGATCTGCCAGTCTCTTCAGGGGCCATCAGCCTTGCATCGGGCTGATCCAGCTGATGGCCTGATCCCAGCTGGGTCAGCTTCCCGCCCTCCTAAAACCAAAGCAGATCTGTAAGTCCTGGTGGTGAAATGGCTTTTCCATACCCAATCCCCTTGAGTTTAAGATCCTCAACGGTGCTATCAGACAAACTCGTTGTTCAAGACACGCAGCTCTTTTACGAATTTTCTATGAAAGTGTTTTACATGTCTGTAAATCTCAAGAGATTTCCAAACGTGATTACGTGTTTAATCTTTGTAAGTGATTGGTGATAGACCAACATCAGCTCTTGTAAGCTACTTGTGAGGAGGAAGAAAGATGGTAGGCTCGACAGCCTAGTTATAAACCACAGGAAGCTCGGTCTCAGGGCTGTGTGATGGAAGATATGCTTATGTGTTGCTTTGAAATCATAAAATTGCACCTGGTGTCGTGCCTCACATGTTTCGTAAATGTCCCATAAATGTGTTGAATGAAAAAAAGAATAAATAAAACTGAGGAGACTTGCTTACACAGCACATA EMBV3_01752 ATACGCATGCACATACAGACGCGCACTACCACAGCCTTGTATTTCGTTTGGGGAAAGAGA Gene GeneID:507708|OSBPL10:XM_002696885:333_cdna Constitutive 0 NULL GeneID:507708 22 GENE OSBPL10 NULL oxysterol binding protein-like 10 EMBV3_36501 ACCGGCGTGGTCAACATCCCCGCCGCAGAGGAGCCATCTAGAACAGTTTCAGGCAGATAC Variant GeneID:532789|PAWR:XM_002687175:11_cdna 373^504 1 EMBV3_16083 GeneID:532789 5 GENE PAWR NULL PRKC, apoptosis, WT1, regulator EMBV3_06669 CATCGCCTCTACCTCAGGAGTTTACCAACAGGAGTTTATGTCATCCCAGGCAAAAGCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09485 TCAGTAACTTCGTGCCTGTCTTCTTGCCAGTGGACACGAGCCGGCTGGACTTCGCCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21309 TTGCAGCCGTTCGCCTAGCGTGGCTTTCAGGTTGATAGAAGTCCAGATTCCGAGGAAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08646 GAGTAGACGAAAAACACAGAAGAACTTACGCTCGGCGCCCGTCTCTAAACGACGACACTT Gene GeneID:407767|HMGCS1:XM_002696363:39_cdna UTR3_Alt 3 NULL GeneID:407767 20 GENE HMGCS1 NULL 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) EMBV3_35059 TCCCGCTCTGCGCCCAGTCCTTCCACCTCAACGTTTACAAGCCCCTCTTCCACTATTTTT Gene GeneID:514246|JUNB:NM_001075656:38_cdna Constitutive 0 NULL GeneID:514246 7 GENE JUNB NULL jun B proto-oncogene EMBV3_39810 GGGCAACTTGGATGTAAACAAGGTCTCCGCCCTTCTCCCTTGACTTTGGGAGTTTATCAA Gene BVT0102_094707 - 1 EMBV3_38580 GK000026.2:31871587-31924431 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30542 CAAGAGGAGGACCGTGGAGACCCAGATCTGCTCGGAGGTACTGACCCTCCTGAGCAACCT Gene GeneID:506518|PEX11G:XM_002688851:189_cdna Constitutive 1 NULL GeneID:506518 7 GENE PEX11G NULL peroxisomal biogenesis factor 11 gamma EMBV3_30447 CTCAGCACACAGGTTCCCAAGACATCTCAGCCAAGTTCCAGAAAGGAGAGGTTTTCATGC Gene BVT0102_141408 + 1 EMBV3_05257 GK000011.2:78514594-78579469 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025624 1 XLOC_014796 NonCoding TCONS_00025624 XLOC_014796 NonCoding NonCoding - 11:78535942-78537572 - TSS18553 1312 2 TCONS_00025624_1 53 0.147865853658537 2 0.195825659914058 1.03701861399807e-05 0.000145518472568916 0 2.53175267695562e-05 0.000120419006636551 0 0 0.000121720600121852 0 0 0 0 0 0 0 0 0 0 0.000655877453934473 8.770042481948e-05 0 0 0 0 0 0 4.01923639013384e-05 0 0 0 NM_001080432.2 FTO Homo sapiens fat mass and obesity associated (FTO), mRNA. 3e-08 64.4 73.45 0.0815548780487805 0 noncoding 0 0 0 0 -0.116152800318064 0.469589159952521 0.0231390075351244 0.713410233792805 GTTGGAACCTAAGGAAGGAGCCACATGGGGAACAACTGGCTTGCAAAGGGTCTCACAGCCCGAGTAGAGTAAGCTGAAGGTCCATGTTGGAGCTTAAGTGGATGAGGAGGACTTCTTGTGGTGGGACAGCTCAGCACTGAGTGTTGAGCCCAAACAGCATGAGAATGGCCTCAGCACAGGTGAGAGGCAGACAAGTATCATATGTCCTGCCCAGGGCCTGGGGCTATAAGGCGCAGGCAGAGTTAAAGGGCTGTGCATACTCAGCAGAGTGCACACATGGCAGTGCCAACGTGACTTCAGTAGAAGCTGCCTTGGGTTGATCAGAAGCAGATGATTTGAACCACCTGCAAGAGTTAACGACCACATCAGCCCAAGGGCGTTTGAATCAGAGATAAGCAGGTAACTCTGAAGACTCTGGTTCCTGCTCTAGGCTCTGTGTCTGGCACCTCACTGACTCAGACTTGTGTAAACTCAGCACACAGGTTCCCAAGACATCTCAGCCAAGTTCCAGAAAGGAGAGGTTTTCATGCAAGCTCCCAGGATTCACTCTCTATAATGCCATTGGTGAAGAGCTCATTGAAGAGGATTTTGAACTTAAAATGTAAACTCCAAACAACCGCAGATGGAAGGACGGAGTTCTTTGTAAGGGCAAATCAGCAAAGATATTAGGAGGCACTCCTTCCGGGTCAGACGGCATGGGATGAGGGTTGCAGGTGAGAAAGCTACAGAATCGGTGATGAGGAAGATATGGACAGGACTGGAAAGGGATGTTTTCATCAGTCACACCTGAATAAGGGTTTCAGCCATTTCAGAGGTTGGAGGATTCTAGAACAGAGTGGTAATAAATTTTCTCTGCCATGGTGGAAATGTTCTCTGTCTGTACTAATACAGCAGCACTAGGAACACGTAGCTAATGAGCACTTGAAATGTGACTGGTGCAGCTGAGGATCTGTATTTTTTTATTTTTTAACTTTCATTCATGAAAATATTTAAATAGGCCCATGTGGCTAGTGGCAACCACAGCAGACAGCTCAGTTCTACAGAATTGGTGACCATTGTATAATTGACTCCTGATGTACTGGGTGAGTTATGGTTATTTTCAATTGTCTCAGATAATAATAATTTTAAAAAGTATTTCAGGTACAATTTTTAGTTAAAGAATCCTTAATTCACGTAAGTCGAGTCTGCAGAGCTCTGGAGTCACCTGTAGGCAAGTTAAGTGAAGTCATCTGCTGCTTGTAGTCCAGACGGTGGTGTCCAGAGAGCGTGGAGTAAATGAGGAAGTGCTCCCCAATGGGCATTACTGGAGCAC TCONS_00025625 s 5' 14313 TCONS_00025625 s 5' 15942 EMBV3_03830 GCCAATAAAATGGCCTACCCTGGTATTTCCACCTTCCTTACAAGCCCACTTCTGCCAGGC Gene BVT0102_176495 + 0 NULL GK000002.2:31699848-31783356 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06358 TTTGATTGACTTGAACACTGTAAAGGGCTTGACCAATCTCCCGAGAGGCTGAGTTCCCCC Gene GeneID:514859|AKT1S1:NM_001083434:223_cdna Constitutive 0 NULL GeneID:514859 18 GENE AKT1S1 MGC148526 AKT1 substrate 1 (proline-rich) EMBV3_13351 GGTCTGGGCCAACCACCTCTTCCTGGGTTGCAGTTACAACAAAGACCTTTTAGACAAGGT Gene GeneID:512206|CDKN2AIPNL:NM_001046112:8_cdna Constitutive 0 NULL GeneID:512206 7 GENE CDKN2AIPNL MGC140202 CDKN2A interacting protein N-terminal like EMBV3_31027 TGAAGGTGGAGAGTCTGAGGACCTCCAATGCGTGTGCCTGAAGACCACTTCGGGGATTAA Gene GeneID:507790|PF4:NM_001101062:53_cdna Constitutive 0 NULL GeneID:507790 6 GENE PF4 NULL platelet factor 4 EMBV3_18275 CTGCAGTGGAAGTGGGGAGTCTTAACCACTGGACTGCCAGGAAAACCCCTTTTACTTTCT Gene GeneID:768052|PIGW:NM_001077109:304_cdna Constitutive 0 NULL GeneID:768052 19 GENE PIGW MGC138970 PIG-W phosphatidylinositol glycan anchor biosynthesis, class W EMBV3_27052 GCAGGAGAATTACGAGCAGTTGCTGCTCCAAGCCATCGGTCGCAAGCTGGAGCGCAGCGA Gene GeneID:100138547|LOC100138547:XM_002691043:435_cdna Constitutive 0 NULL GeneID:100138547 10 GENE LOC100138547 NULL hypothetical protein LOC100138547 EMBV3_26727 CCATGTTTCCTATGCCTTCATCATCTCCAGCATTCTCCATATCACCTCCACAGAGGGACG Gene GeneID:513333|LOC513333:XM_002699195:68_cdna Constitutive 0 NULL GeneID:513333 29 GENE LOC513333 NULL similar to olfactory receptor, family 8, subfamily A, member 1 EMBV3_12247 GAGCACCGAGGTTCCTGACAGCTAAGACCAAAAGTTCCATGCTGAGAAAGAAGTGGACAG Gene BVT0102_198044 - 1 EMBV3_13057 GK000018.2:10587119-10609485 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082247 1 XLOC_050947 Coding TCONS_00082247 XLOC_050947 Coding Coding ATP2C2 18:10600231-10688582 j TSS62068 4943 1 TCONS_00082247_6 1107 0.0509811855148695 29 0.944380305602716 0.0023693692840183 0.00132688616733255 0.00128921114799949 0.000333636668632651 0.000163081394017197 0.000463451517243704 0.00141553300644754 0.000651897738143269 0.00113898352386877 0.00024526675315986 4.72710407620425e-17 3.58178169508214e-05 6.03559271581684e-05 3.95657308602362e-36 2.02748696686701e-27 2.91674072302684e-17 8.33180660500686e-11 5.36145610400144e-13 0.00157008458155816 0.00159279240760545 0.000134957814613524 1.87183811570349e-13 1.97553995019784e-12 1.64741778943997e-18 0.000449304570412863 0.000925515504878432 0.0001955712480328 1.37979131521922e-05 1.29487549837992e-13 1.64349519490377e-13 XM_002694745.2 ATP2C2 PREDICTED: Bos taurus ATPase, Ca++ transporting, type 2C, member 2 (ATP2C2), mRNA. 0.0 5860 100.00 0.657090835524985 NM_014861.2 ATP2C2 Homo sapiens ATPase, Ca++ transporting, type 2C, member 2 (ATP2C2), 0.0 3317 84.19 0.610965001011532 TCONS_00082247_6 sp|O75185|AT2C2_HUMAN AT2C2_HUMAN Calcium-transporting ATPase type 2C member 2; 0.0 1637 87.20 0.852755194218609 6 coding 0 0 0 0 -0.0234960529376585 0.873052204532699 -0.0181547955940993 0.717122692017774 CCTACTCCCACTGGGGAGGTTGAGAAGGATGGTCTCTCTGTATCCCCTTGCATGGTCTTGGCAGATCTGGTATCCTTTCACCAAATTCCCTTTTTTGCTTAAAATACCCAGTTTCTGCTGCTTGTAGCCAGGAGGTTGGTAACTGATACAGCTGGGTGAAGCTTAGCATTAACTGAGTGCTAACCAGAGCACCGAGGTTCCTGACAGCTAAGACCAAAAGTTCCATGCTGAGAAAGAAGTGGACAGTTCGTCAAGAAAGAAAAGCCTTTTTTTTTTCTTCTAAGTTATCATATCGCATGATGCTCACCAGACTCTGAAGAGTCAACAGAATTTTTTCTAAATTAAACACAGGAACCGTAGGATGCCCTCCGGCAGGTCTTGGCATGGGCTCTACCCATGATAACAGCCCCCGAGGACAGCACCCCTGCTAGTCCATCCAGTCCCCTGCTTTGTAGGGGTTCAGAGAGGACGCCTGTTCTCTGCCTCGAGCCTCTGTGAACCTACAGCGGTGCAACTCGTCCCCCCGGGACCTCTGCCCAACCTGCCTGAGCCCACCTGGCAGCCCCGTGGACCCCAGCTGGGCTCACTCAGCACCAGGTCTGAATGTTGCACAATATCCACTGCCCAGAATCTGCTTCCTGAATGCCCTGGACATACTCGTGCCTGACCCACAAATTCTTGACAATCTGAGCTGGAGCTGAGGTGGAGCTTTCAAGGCAAAGATATTTGCCCAACACATCACCCCCTGCTCACAAATAATCTGTTTATCAAACTTTCGCCAAAGCACTCAGTTGGAGGTGCCAAACCCTGACTTAGATAGGTGGTGTCACTCCCATTTTGTGGGTGAGTAAGCTGAGGTGCAAAAAGGGGATAAGAATCGCCCAAGGTCACCCGTCGGCTAGGAACAGGCCTGGGATTAAAATCTGACTCACACCAGAGTCTTGCTTTTCCTGTCACTTCCGGGCCTTTGCTGAAATTGATGGAAGTGGGCAGCGTTGTTTCTGCGAAGAGGGGAAGAGGCGGGAGAAACAAGAAGGGCTTCTAGAACCCACTGGGTTGAGTGGGGCTGACGTGGCCACCCCTTGGGGAGCAGCTGGGATAAGTGGCAAACACATACACGTGTCCTGCCCTACAGTCCTTAAGTAACCCCACTCGACAGATAAGAAAACTGAGGCGCAGAATAGCGGCACAGCCTCCTCTGAAGCCCCCTCCCCACTAAGCAGTGGGTCTTGTTCTGGATTCCCGTGCTGTGTGAAGCCAAAACACTTACACATCTCAGTATATCCACTTGGAGGCTGGAACCCGTCTACACTGCACATTCACCCACAGGCTTTGGGAGCCATGTGAGCCCAGTGATGATGAGAGTGACTATGCCATCCCCATACCCCATACACTATGCCAAGCCCTGCCCTGAGCTCTTCCCATATAAGACGGCCCAGCAAATTTCCTCTCAATTTCACTATGAAGGAGGTGCCATCACGGTGGCCATTTTACAGATGACTGCATCTCACGATTGGGCAAGTTTGGGAAACAGCCCAAGCTTTGAGGCCCCTCCGCAGCCCCCGGGGCCTTCCCCAGGCCGCCGCGGCCCCTCAAGGGCGGGAAAGTCCGGGAGGGGCGGGGCCCGGTGCTCCGAGGGCCTCCCTGTGCGCAGCTCCGCCCCGGGGGTGGGGCCTCACCTGCGGCAGGCAGGTAGGCGGCTACCTGGTAACCTGGGCCTGGCCCGGGAGGCTTGGGCGCGCGCAGCCAGCCCCGGCCACGCCAGGGACCGAGGGACGCAGGCACAGGCGGCCGCCGGCGGGACGGGAGGCTGGGCGAGGGGCCTGCACCCGCTCACTATGGTCGAAGGACGCTTCTCCAGGTTGCTGCAGAAGCTCGCCTTCTGGGGCTCGAGCCACAAGTACGAGCTGCTGGCGAAGGGCGAGTTGGAAACCTTGATTGATGGACAAAATGACTTGAAAGCTATCGAGAAAGAGAAGACAGTGGTGGCTCTGGAACCCAAGGAAGCAAGCAAATGCCACAGAGAGGACCTAGCCAAAGCATTTTACGTAGATTTACAGAATGGGCTGTCAGAGTTCTCAGTGACGCAGCGCAGGCTGGTCCATGGCTGGAATGAGTTTGTTGCTGATAACACGGAACCTGTGTGGAAGAAATATCTCGATCAGTTCAAGAATCCCCTGATCCTGCTGCTCCTGGCCTCTGCCTTGGTGAGCGTCCTCACAAAGAAGTATGAGGATGCCATCAGCATCGCCGTGGCTGTGCTGATCGTGGTCACCGTCGCCTTCATCCAGGAGTACAGATCAGAGAAATCTCTGGAAGAGCTGACAAAGCTGGTTCCCCCCGAATGCAACTGCATAAGAGAAGGAAAGCTCCAGCACCTGCTAGCTCGAGACCTGGTACCTGGAGACATCGTGTCTCTCTCCATCGGAGACCGCGTCCCTGCTGACATCCGTCTCACAGAGGTCACAGACCTCCTGGTGGACGAGTCCAGTTTCACGGGAGAAGCCGAGCCAAGCAGTAAGACAGATACCCCACTGACAGGCGAGGGTGACCTCACGACCCTGAGCAACATCGTCTTCATGGGGACCCTGGTGCAGTGCGGGAAGGGCCAGGGCGTCGTGATCGGAACAGGAGAAAAGTCCCAGTTTGGAGAGGTGTTCAAGATGATGCAGGCTGAAGAGACACCTAAAACTCCTCTACAGAAAAGCATGGACAAGCTGGGGAAGCAACTGACACTCTTCTCATTCGGCATAATTGGCCTGATCATGTTCACTGGCTGGCTGCAAGGGAAACACCTGCTCAGCATGTTCACCATCGGGGTCAGCCTGGCTGTGGCCGCCATCCCCGAGGGCCTGCCCATCGTCGTCACAGTTACGCTGGTCCTGGGAGTGCTGCGCATGGCCCGGAAGCGAGTTATTGTGAAGAAGCTGCCGATCGTGGAGACCTTAGGTTGCTGCAACGTCATCTGTTCCGATAAGACGGGGACTCTGACTGCCAACGAAATGACTGTCACCCAACTCGTAACATCTGATGGGCTCCATGCCGAGGTCAGCGGAGTTGGCTACAACGGCAATGGGACTGTCTGCCTTTTACCCTCCAAGGAAGTCATTAAGCAGTTTTCCAACGTCTCGGTGGGGAAGTTAGTGGAGGCAGGCTGTGTTGCCAACAACGCCATCATCAGAAAAAACACCGTGATGGGGCAGCCAACAGAGGGCGCCTTGGTGGCCCTGGCAATGAAGATGGACTTAGGCGATATTAAAGATTCATACATCCGAAAGAAAGAGATCCCGTTCAGTTCGGAGCAGAAGTGGATGGCAGTTCAGTGCAGCTCCAAGAATGAGGAGCGGGAAGATATGTACTTCATGAAGGGGGCCTTTGAGGAGGTGATTCGTTACTGCGCCATGTACAACCACGGGGGCATCCCCCTGCCGCTGACGCCCCAGCAGCGAGCCTTCTGCCAGCAGGAGGAGAAGAAGATGGGATCCCTGGGCCTGCGAGTGCTGGCCCTGGCCTCCGGGCCCGAGCTGGGGAAGCTGACGTTTCTGGGTCTCATCGGAATCATCGACCCTCCCAGGGCTGGCGTGAAGGAAGCAGTCCAGGTTCTCTCGGAGTCGGGCTTGTCTGTGAAGATGATAACGGGGGATGCTCTGGAGACGGCCTTGGCGATAGGAAGGAACGTCGGTCTGTGCAATGGGAAGCTGAGCGCCATGTCCGGGGAAGAGGTGGAAAGCGCCGAGCAGGGAGAGCTGGCCGAGCACATCGGGAAGGTGTCCGTCTTCTACAGGACCAGCCCAAAGCACAAACTCAAAATCATCAAGGCTCTGCAGGAGACAGGGGCGATTGTGGCCATGACCGGGGATGGGGTGAACGACGCAGTCGCCCTGAAGTCGGCGGACATCGGCATCGCCATGGGGCAGACGGGGACGGATGTCAGCAAGGAGGCCGCCAACATGATCCTGGTGGACGACGAGTTCTCGGCCATCATGAACGCAGTGGAGGAAGGCAAGGGGATTTTTCATAACATCAAGAACTTTGTCCGCTTTCAGCTGAGCACGAGCATCTCGGCCTTGAGCCTCATCACGCTGTCCACCGTGTGCAACCTGCCCAACCCCCTCAACGCCATGCAGATCCTGTGGATCAACATCATCATGGACGGGCCGCCGGCGCAGAGCCTGGGTGTGGAGCCGGTGGACAAGGACACACTCCGGCAGCCGCCGCGGAACGTCAAGGACCAGATCCTGAGCCGAGCCCTTGTCCTGCGGATCCTCCTCTCGGCCACCACCATCATCAGCGGGACCCTCTTCATCTTCTGGAAGGAGATGCCTGAGGACAGGGCAAGCACCCCGCGCACCACAACCATGGCCTTCACCTGCTTCGTGTTCTTCGACCTCTTCAACGCCTTGACCTGCCGCTCCCAGACCAAGCTGATCTTCGAGATCGGCTTCCTCCGGAACCGCACGTTCCTCTACTCTGTGCTCGGCTCCATCCTGGGACAGCTGGCTGTCATTTACACGCCGCCCCTGCAGAGGGTCTTCCAGACAGAGAGCCTGGGGGCGCTGGATTTATTGCTTTTAACCGGATTGGCCTCGTCTGTGTTCATCTTGTCAGAGCTCTTCAAGCTGTGTGAAAAGTTCTGCTGCAGAGCCCAGAAAGCCCAGACCCCCCAGGAAGACGCATAGTGGACCCTGACCCGTGGGAAGGTCCCTAAATCTCTATTTTCATATGACTGTGGCCCTCCGCCTGCCCCGTCCCTTCCGAGACGTGCCTGAGGACACGCCAGTGTCGGGTCCGCTCACCTGGCTGTTCCTGGGGAGCCGGTGGGGCGTGCAGGCCCAGCCCCGAGTCCTCGGTCCCTGTGTGCATCCGCCGCTCCGTGCTGCCGGGCCCTGGGACGATCCATGAGGAGCCGGCACTATTTATTAAATGATGGTGATTTTTATGAA EMBV3_29117 AATGTAAAACTTCAACTGCTGTCAAAACTTGAGTTGAAATCAAGTTATCAGTTATCTTGG Gene GeneID:617105|EEF1E1:NM_001040599:8_cdna Constitutive 2 NULL GeneID:617105 23 GENE EEF1E1 MGC128552 eukaryotic translation elongation factor 1 epsilon 1 EMBV3_42845 TCTGGTTACAGAACTTGGGGAGCGGAGTCTGTAAGACCACCTGGCCCTCCTGCTCTTTGT Gene GeneID:538144|TMED1:NM_001038563:84_cdna Constitutive 1 NULL GeneID:538144 7 GENE TMED1 MGC133977 transmembrane emp24 protein transport domain containing 1 EMBV3_17634 CAAGAATATTGTCGTGAAACAGGTGGCAGCAGAGGCCCAGCAAAGGATGAGCGTCAGAAA Gene GeneID:527882|LOC527882:XR_084161:57_cdna Constitutive 0 NULL GeneID:527882 1 PSEUDO LOC527882 NULL similar to double von Willebrand factor A domains EMBV3_16029 ATGGAGCCCTCGTAGCTCACCCCACAGTGTTTCTGCAGCCCTGGTTTACAAAGGGTTATA Gene GeneID:539524|HSPB8:NM_001014955:249_cdna UTR3_Alt 2 NULL GeneID:539524 17 GENE HSPB8 NULL heat shock 22kDa protein 8 EMBV3_23291 AGAACGCATAGCAACTCAGCTCAGGGAGCTACCAGAGGAAAATAGCAACTGATGTGGGTG Gene GeneID:514326|TLE3:XM_002690487:429_cdna Constitutive 3 NULL GeneID:514326 10 GENE TLE3 NULL transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) EMBV3_08614 GTGCACCCAACCCTGTCCAACAAAGAGAAGGAGATGACCCCACCCTGAGCGTAAGGTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28823 GTGGCAGACCATGATCGAAGCTCACGTTGATGTCAAGACTACCGATGGTTACTTGCTTCG Gene GeneID:282053|RPS3A:NM_001034038:5_cdna Constitutive 0 NULL GeneID:282053 17 GENE RPS3A MGC127088 RPS3AE ribosomal protein S3A EMBV3_38620 GGTCACATTCATGGGTACTGAAAATTAGGACTTGGATATACCTTTTGGGTAGTCACACTC Gene BVV0102_152951 + 0 NULL GK000017.2:41446124-41671499 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04231 TTGTGTTGTTTTTGCACAGTCTCCGGAAAAGTGAAGGCTCCCAATCCGAGTAGTACTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32769 GTCTGACTGAAGTTGCAGAGAAGCAGATGCAATCAAACCTGGAGAAGATCCTACAGCGCC Gene GeneID:513266|CD209:NM_001145756:32_cdna Constitutive 0 NULL GeneID:513266 7 GENE CD209 DC-SIGN CD209 molecule EMBV3_05284 GGAATACTCCTTACTAGCCACACAGTGCTTTCTGTGATGTTAACTGGCTATACCTTTAAC Gene BVV0102_029610 + 0 NULL GK000026.2:14881388-14917016 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150148 TCONS_00150147 TCONS_00150145 1 XLOC_091816 Coding TCONS_00150148 XLOC_091816 Coding Coding CEP55 26:14868830-14890164 j TSS112546 2341 1 TCONS_00150148_2 463 9 0.890685791965499 0.00102980992939035 0.00043304268512186 0.000101841647790956 0.000604494232439352 0.001152412940048 0.0003294175840033 0.00244792921304509 0.000656107403589954 0.00256753213468776 0.000134127500890729 0.000286130286331305 7.9805376766714e-05 0.000403390428462065 2.12513005978815e-12 0.000414621713987795 0.0043563760611382 0.00144274549947189 2.55592653248204e-07 4.79806752501915e-12 4.61293308741101e-06 5.90235953990323e-08 0.000309736709606357 0.00141416790981805 0.00232614302213827 1.25861698821745e-08 3.46821308181091e-06 0.000248775141099187 4.54801986732457e-05 8.14627785531891e-05 0.000164865814219005 NM_001205761.1 CEP55 Bos taurus centrosomal protein 55kDa (CEP55), mRNA. 0.0 3265 99.89 0.774882528833832 NM_018131.4 CEP55 Homo sapiens centrosomal protein 55kDa (CEP55), transcript variant 0.0 2271 81.41 0.981631781290047 TCONS_00150148_2 sp|Q53EZ4|CEP55_HUMAN CEP55_HUMAN Centrosomal protein of 55 kDa; 0.0 788 85.34 0.997840172786177 1 coding 1 1 0 0 0.225791805737274 0.412741551195192 -0.0428073873349702 0.460798896719399 ACTGGGCCGACTCGAGCGCTGCGCTTCGCCTCAGGCACTTTCAGAGATGTCTTCCAGAAATCCCAAAGATTTAATTAAAAGTAAATGGGGACCAAAGCCTAGTAACTCCAAATCAGAAACTGCATTAGAAAAATTTAGGGGAGAAATAACAGCTTTAAAAACATCGGTAGATGAAATCACAAGTGGAAAAGGAAAGCTGATTGATAAAGACAGACACAAACTTTTGGAGAAAATTCGAGTCCTTGAAGCTGAGAGAGAGAAGAATGTTTATCGCCTCACAGAGAAGGACAAAGAAATACAGCGACTCAGAGACCAGCTGAAAGCCAAGCACAGCAGTACTGCATTGCTTGAACAGCTCGAAGAGAAAACCAAGGAAGTTGAAAGAAGAGAACAGCTGTTGAAATCCTTGTCTGAAGAGACAGATGTGTTGAAGAAACAGTTGTCTGCTACAACTGCAAGGCTTGCTGAACTTGAAGGCAAAGCCAATACACTTCATTTATCGCAGACTGTGGCTACAAGTTGCTTCAATTCATCAATGAGTAATATTCATGAAATGGAAGTACAGCTGAAAGATGCTCTGGAGAAAAATCAGCAGTGGCTTGTGTATGATCAGCAGCGAGAGGCCTACGTGAAAGCGCTTCTAGCGAAAATCTTTGAGTTGGAACAGAAACTGGAAACAGCCCCTCAGACACTCCCGCAGCAGACAAAAAAGACTGAATCAGAAGGTTATCTTCAAGAAGAAAAGCAAAAATATTATAACCATCTCTTGGAAAATGCAAAAAAAGATCTTGAAGTGGAACGACAAACCATAACTCAGCTGAATTTTGAACTGAGTGAATTTCGAAGAAAATATGAAGAAACCCAAAAAGAAGTGCAAGATTTAAATCAACTGTTGTGTTCACAAAGAAAGGCAGATGTACAACATCTAGAAGATGACAGGCATAAAACAGAGAAAATACAGAGGCTCAAGGAAGAGAATGATCTTGCCAGGGAAAAACTTGAAGAAGAGAAGAAAAGATCTGAGGAGCTGTTATCTCGGGTCCAGTTTCTTTACACGTCTCTGATAAAGCAGCAGGAGGAACAAACAAGGGTAGCTCTGTTGGAACAACAGATGCAGGCATGTACTTTAGACTTTGAAAATGAAAAACTTGACCGTCAAAATATGCAACATCAATTGCATGTGATTCTTAAGGAGCTCCGCAAAGCAAGAAATCAAATAACACAGTTGGAATCCTTGAAGCAGATTCGTGAGTTTGCCTTCACAGAGCCATTAGTCACTTTCCAAAAGGAGACTGAAAACAGAGGAAAAGTCGCCTCACCAAAATGTCCCACTGCTGCGTTAAATGAAAGCCTGGTGGAATGTCCTAAGTGCAATATCCAATATCCAGCCACCGAACACCGAGATCTACTCGTCCACGTTGAATACTGTTCCAAGTAGCAATGTGATTATTCTTTGTTTTTGTGCCAAAAGGTTCAATACTGTATCTTACGTTAGCTAATGGACATTTTGAATTGCTTATTTCACCTCACATCAGAAACTGCCTGTCTACCTTTAAGACTCTAGCATAGCAGTGAATCATTGTGTTTTGTTTTTGTTTTTGTTTTTTTGCCTGCTTTGCATTTCCGAGCATTGAATGCTGAGACCGCCAACATTTTGCACTGTTAAAGTACTTGATGAAGAAAAGATAGTTCAGGTTATTGCTTGTAGGTCAAATCTGTTACACCAACAAGCAAATATTTTATGTTTTTCAGATTTTTAAAAAATCAAAGGCAATTAACCAGGGATCTTTATTGTTATTATTTTTTAATCCAAGCACTTCATAAACCTACCATTCTGACTTTGATGTTCTTTGTGAAGAGATGGTGATACTTTTTTCTTTTCATTTATATTTCCTTTCTATGATAGAGCAGTTATTAGAAAAGTTGGGCGTTTTCTTCATCTTTATTGCTGCTTACTGTTGAAACTGTAGACCTAGCTGTGTTTGAAGCACAAAGTAGATTCTGTTTAAGGAATACTCCTTACTAGCCACACAGTGCTTTCTGTGATGTTAACTGGCTATACCTTTAACTTGAATTTCATCAGCACATGTTAGTTAGCTAAAATTGTTAAAATGAATTTTAACAAAACCACCGAGCCCTCTCTTTTGATATGCAAATGTTTTATTTATTTATTTTTGGCAGTCTTGAAAGCTGGGTGATGTAATGAGCAGATATTTGGTTATCTGAATATTTTTATACATGTGTGCATAAACCAAGATTTTTTTTTAAATTTCTTCAGGTTTTCTAAAATGCTTAACACTGGGCTACTATTGGTAATGTAAAGGAGAAAAGAATAAAGAGT EMBV3_35419 ATCTGTGGGGAGGAGAAAACTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAGC Gene GeneID:617031|GALNTL5:NM_001076441:727_cdna Constitutive 0 NULL GeneID:617031 4 GENE GALNTL5 MGC133911 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 EMBV3_33295 CTCTTTACTCACCATTTTAATACTGCTGTCAACTGTAACAGATTAAAATCTGTACACACG Gene BVV0102_372949 + 0 NULL GK000003.2:33965045-33969542 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172973 TCONS_00172968 TCONS_00172970 TCONS_00172972 TCONS_00172969 TCONS_00172971 TCONS_00172967 TCONS_00172974 TCONS_00172966 1 XLOC_104263 Coding TCONS_00172966 XLOC_104263 Coding Coding GNAI3 3:33966542-33982019 j TSS128703 4871 1 TCONS_00172966_1 236 0.0197084787517963 7 0.685706901008012 1.53167935721981e-28 6.32721551170275e-27 4.30083652860032e-25 2.31012538977003e-38 1.1219444692703e-26 2.58767414620165e-23 9.88182537098599e-16 6.5883379307536e-14 9.33809167382113e-14 9.51976129939017e-13 2.63860728364119e-11 1.39075877579653e-05 1.06137879320965e-36 3.09510428907075e-171 6.67192039084035e-09 0.00300150635134623 0.00118221821993735 0.0020997426295992 3.47564225451785e-28 4.89766630113797e-18 4.11538371465939e-31 1.2047236336652e-05 0.00124196824337775 0.00262574705861408 0.00243514280538146 4.0356609725983e-65 0.000222494289448852 3.25617287525323e-13 9.40090470001781e-10 0.000212571447144194 NM_001034677.1 G protein Bos taurus guanine nucleotide binding protein (G protein), alpha 0.0 3220 99.94 0.367275713405872 NM_006496.3 G protein Homo sapiens guanine nucleotide binding protein (G protein), alpha 0.0 3561 85.52 0.642167932662698 TCONS_00172966_1 sp|P08754|GNAI3_HUMAN GNAI3_HUMAN Guanine nucleotide-binding protein G(k) subunit alpha; 2e-176 494 98.73 0.995762711864407 2 coding 0 0 0 0 -0.0315230240395684 0.940356626398564 0.0374059057595192 0.487262151683723 GTGCACTTCTGACTATAGTGCGGTGAGAAGGGAGGAGACAGGCTTCATTGTAAATTCTCTCAAACTACACTGCCAAGAAAGGACGATGCCCGGCAATTATTTGTTTTAGCTGGCAGTGCCGAAGAAGGAGTCATGACTCCAGAATTAGCAGGAGTGATTAAACGGTTATGGCGAGATGGTGGGGTGCAAGCTTGCTTCAGCAGATCCAGGGAATATCAGCTCAATGATTCGGCTTCATATTACCTAAATGATTTGGATAGAATATCCCAAACCAACTACATTCCAACTCAGCAAGACGTTTTGCGGACGAGAGTGAAGACCACAGGCATTGTGGAAACACATTTCACTTTCAAAGACCTATACTTCAAGATGTTTGATGTAGGTGGCCAAAGATCAGAACGAAAAAAGTGGATTCACTGTTTTGAGGGAGTGACAGCAATTATCTTCTGTGTGGCCCTCAGTGATTATGACCTTGTTCTGGCTGAAGATGAGGAGATGAACCGAATGCATGAAAGCATGAAACTCTTTGACAGCATTTGTAACAACAAATGGTTTACAGACACTTCGATCATTCTGTTTCTCAACAAGAAAGATCTTTTTGAGGAAAAAATAAAGAGGAGTTCATTAACTATCTGTTATCCAGAATACACAGGTTCCAACACATATGAAGAAGCAGCTGCGTACATTCAGTGCCAGTTTGAAGACCTGAACAGAAGAAAAGATACCAAGGAGATCTATACCCACTTCACCTGTGCCACAGACACCAAGAACGTGCAGTTTGTTTTTGATGCTGTAACAGATGTCATCATTAAAAACAACTTAAAGGAATGTGGGCTTTATTGAATAGAGTGTGGATGTTAATAAAAGTTATTACAGTGTGGAGTGTTGAGACCAGACTTCCTTTGCTGCCTCATTGGGCAGCGCAAGCATGAACGGGACCAGGGAATGGCAGCAGCATGCAGAATCCTAGCACTCTTTTAGCACAATCCTCTGTATTAGGGAACTCTTAATTGACACAAGATGCTAAAGTCAGACATTGGAATTGGAGCAACTGTAAAGTATGGTTTGATCATCGAGACATGACTTGGATTTCATAGTCTCAAACGTTTAGGGCAGATGTGAAGTTGAGGTGCTGCATTCCAGAACTTCAATATGTAGCTTACTGTTTTTCTTCTTCCCTCTTGACAAACCACCAGTAGTTCATTTTTTTCAAGTTTTCTTTTTTTTTCCATCAAGGGAAGAATAACTTCACTGAATTTTATTTTTTTGTGAAAGAACCTTTATTAAAACACAAACAATCTTAACTATGCACATAATGTGACCAGATCATCTTGAAAATATTCCTCCTAGTAGGAATTCTTTGTTTATAACTCTAGGTATGGTCAGAATATAATATTTCCATAATAACTTAATTCTTTTCAGTTATTTGGGCTCTGATTATAGGTTTTTTGGATAAAATTTATGTTACTATCCTGCTCAGAGTACCATTATGGTTTCTAAATGGCAATTACATTGAAGAAGTCTATAGTAAGATTCTCTTTTTTTTTTTTAAGCTTGTGGTTGAAGGTTAACCTAGTTTATGCTAATCACCAAATTACTAAATAAATGCTGATGTAGTATGATAAAGTCAGCTTCTTGGATACAGACACACCCAGGGCAGCTGTCAGTTAGAAAAGTATATTGCTAAATTCCAAACAGAACCAATGACTTTGCTGCTACATATCTGCTAAATTGATCACTTTGATTCCTGCTTGTTTGTCTTAGTCATAGGGAGTTCTGTAAAAGATGCCCCATGTTTTCCATCTTCCATTGGCCTTTTCTGTTGAGAAACATCTGAAGTGTATTAAAAGTGCATGCTTTTACTTTGTAAATGTGGTGCCAAATCCCTGTTTGCCATTGTTTTTACTGTAGCAATGTTGATTGTAGTAATCCTTAGTTAGTACCTTGTTTTGCTGAAACTATTGATTTTGGGACTTTTTTCTACTTTGTCGTGTGTACAGATTTTAATCTGTTACAGTTGACAGCAGTATTAAAATGGTGAGTAAAGAGTCCAGGTTTGTTCCTGTTTGTAATTAGTCCTTTCTGGAAATATTTTCTTCTGCTGTTTTTTGCCTCTGCTGAGTGTGCTTAGGCCTTGGTCTGAGAATGGGTTTAGGTAGAAGGGTTCTCTGAAGGTCTTAAGTCTTTTGATGTAATAGTATTGTTGAGTCTTGGCCTGATTGAGGTTGTTATGTCATATCTGTATAAGTGATGCACAGTCAAAACCCATTTTCCACATTTACATTTTGGTTTTGTGAAGAGCTCTTTTCACCTCAGCCTGCAGGTCCTTTTGTGCAATGTACTGCAAATGTCATTAAATATTGAATGGTCCATTAGGGGAAGGCAAAGGAAGAGAATGCAGTTTGAGCATTCCAAATCAGTAATTTGAGCAGTGCCTTTTGGGGTCCAGTCTTTTTGGATTGGATTCTGTTTCATCTTTTGATGTGACCTTTCAGTAGTTTAAAAAAAATAAGGTTGGTGGTCATCAAAGCTGGTTCAGAAGGCAAGCCACAGCACTTCAGTGCCTTTATTGGTAGGTTTTTTTCTTTTTGCTTTCTTGGGAAAATTTTAACTCTGCAGGTGGTATAACTCTTATTATCTAACAACTTTTTTTTTAGGATTGGCAAAACTGGATCTAAAAGAAAGAAAATTATCAGCTTCAATTGGTGATTGACTTATGCCCACAGTGTAAATAAGGGATAGTTCTTGTTCATTTTGAATATATCTTTTCCTTATTGTATTCTGTGATGTAGAATCATTTGGAAATGAGAACTGGTAGAATGTTACTTTAACTGTAGTTTTTCTATAGTCTGGGCTAGTGGGATCGTGTTGTTGATAACCCAAAACAAGAGATAATCCAAAAAAGTTAATTTAACTTGAAATGCATTTTGTATTTTCATTTGAATATGTCTATCTGATGTGTTAATTTTTTAGCCTTTTCATTAATGAAAAATAGTAATTCTCCACTTTTTTGACTTTACACCATTTACATTTGTCCTATATTTATGTGAGGATCACTTCTTACCCCTCCATCCCAAATAATTTATCAAAATGCACATTCGTTGAGGACACAGTTTCAGTCAGTGGTTTTCAAATATGCCTTCAGTCAAAATCACCTGGATCCATCTCAGAGACTGACTCTTGGATGGCGGGCTAGCAGTCTATAATTTTAAAAAGGTGATTTTGATCTGATAAATCTGATGGTCTGCCTTACAAACCACTATTGTGTTTTGAATTAAAAGATCTTTTCTTATAGCAGAACCAAAATGTAGGGATGACACATCATATCTACTAGCCTGGAGAAAAAGGATTGATATTTGTAATCAAAGAAATGAAAAGTTGCCTGTATCTTTTTGGTGGAAAATACTGAAAATTTGTGATGGATCATGTTTCAGAATTTAGTTGGCCAGGCTTTGGACCATCTAAGAAATCAGCACATCTAAGAAAGTTAAAAAATTAAATAACAGTAAATAGCCATTGGCAGGAAGGACTGTAACAGCAGCTTTATTTTGTTGACAGTCACATCTTAGCCACTTGATTAAAACTCTGGGGTGTAAAATTGCCATCTTTAGGCTCCTATGTAAAGAGGAAGTATTCTGCTCCTTAATGGTCAGTCTTAGGGAATAAATAACCTTACAATTTCAGCCTTTCAACAGATTTCACCTCCTGGCGTGAAAATTCTAAGAACTGTTAGAGTTATTCATAAGTGGATCTTGAAGTGCCATTTTCATCTTGGATGGTTTGACTCTAGACCTCTAGTTTAGTGCGTTGTACCTGACGGGTTGTGACTTTTCACAAGGTGCTGCTTTCTAAGAATAGATGGACCACATTTTAAAAACCTGTTCCTTGCCTTGTTCATTTTTTATTCTCTTATGTATTCTATTTGTGTTTTATTTATACACATTTTGGAGTATTTAAAAATAACTGGTGGTTCTTCGAATTTATTTGCTCACCTTATATTCTTAAATTCTCTCTGATTTGTGGCTGTTCTCTCTGATTTGTAGCTATAACTTTGTTTGGACCTTGATGGCCTCATCTGACTAGTTACTTTTTTATATTTATCCATTTGCTTAGCATAGTTCTGGCATTTCCTGTTGCAGAGCTCCTTGCTGCATTGGCAGTTACATACAAGGGGAAGTTAAGTTAGTCTCTCAGTCAATCAAAAAGCTGCCTTTGAATGATTTTTTTTTCCTTTTAGATGTTCAAAAAACAGTGGCCCCTTACTCATTGATACAAACCTAAAATATTAATAGTACTAATTCCTTTTACTGATTCCCTGTGAAATCTTTCATATGTGATACTGACTTTAAGAATAAAATTATCTCAGTTTCCCAGTACTACCAGGTAATTTTCTTCTTCCAGTTTAGGCTTCAAAGTACAAATCAGAGATCTGACCTGAACCAGCCACAGGTCTCCTTGTAAACTTATGACTGTCCAAACACAAAAGAAAACCAAGCTGCTTAGAGACCTGGAACTTAGATACCTCTTGCTATCAACTATCAGAAAGTAAAAGATTTAATTTAAGTGAGGCATACTGAAGAATAGACTTCCAGGATGGTCAGGATCCTTGTTCCTTTACCCTTGTCTAGGTTTTGAATTCCCATTACCCCTCACCACCCACCCTCCAGTTTTCTCACAATCTTTTATGAATTACTTCTCCCGAGGAGAGCATATTTCAGAACAAATCAGGGCAAGACAGTTATTTTCTGGTACTTTGTCAGGCCTGCACCTGGCTTTATTCAAGGCTTCTCAGGAATAAGAGATAATGTGGAATATTATGCAGCAGCAGATACCTGTGGTGCACGATTAACATAGAGATTCTTTGGCTAACC EMBV3_19597 TCCTATGCCTCCGCATGGTATGCGTGGACCTCCTCCACTGATGCCTCCTCATGGATACAC Gene GeneID:506123|SF3B4:XM_002686051:268_cdna Constitutive 0 NULL GeneID:506123 3 GENE SF3B4 NULL splicing factor 3b, subunit 4, 49kDa EMBV3_21626 GCCGACCCGGACCTCAACAACCCTTTCAAGCCTCCACCAGGTAATGTGAAAATGCCTAAC Variant GeneID:535352|SCAMP1:NM_001076054:27_cdna 117^194 1 EMBV3_31966 GeneID:535352 10 GENE SCAMP1 MGC127646 secretory carrier membrane protein 1 EMBV3_17751 ACGATTCCAGTGGGATGATTTTAACACGCAGAATGTCCCTGGGGTTTCTTCTGTGCTTGC Gene GeneID:784935|LOC784935:XR_084693:17_cdna Constitutive 0 NULL GeneID:784935 5 PSEUDO LOC784935 NULL similar to Histone acetyltransferase p300 (E1A-associated protein p300) EMBV3_30521 CACTTCATCTTCCACGACAACAACCATAGCTGGGAGGGGCACTACTATCACTACTCGGAC Gene GeneID:509040|APCDD1:XM_002697746:250_cdna UTR3_Alt 2 NULL GeneID:509040 24 GENE APCDD1 NULL adenomatosis polyposis coli down-regulated 1 EMBV3_27687 GAACCACCACGTGTGCCCCGTGGAGAACTGGTCTTCTTCATCCACGAGAGCTCTCAGCTG Variant GeneID:515742|TMEM150A:XM_002691366:221_cdna 297^762 7 EMBV3_24767 GeneID:515742 11 GENE TMEM150A TMEM150 transmembrane protein 150A EMBV3_01290 CTCACAAGAGAAGGGAATGACTATTTAATGGGTGTGGTGTTTCTTTAGGGGTGCTGAAAG Gene BVV0102_285040 + 0 NULL GK000003.2:106737438-106787341 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14432 CTGAGGGGCAATTCATCACATTCTTGTCCCTAGCTCCCTTGATCCAATGGCAGAAAGTGG Gene BVV0102_364946 - 1 EMBV3_29081 GK000011.2:45640371-45653185 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26461 TTGTCACTCGGCATCAGAGGGCTGGAGATCAAAAGTGCAAAAGACGGAATCTGGGCCTTC Gene GeneID:504978|LOC504978:XM_002685790:661_cdna Constitutive 0 NULL GeneID:504978 2 GENE LOC504978 NULL similar to Group IIC secretory phospholipase A2 precursor (Phosphatidylcholine 2-acylhydrolase GIIC) (GIIC sPLA2) (PLA2-8) (14 kDa phospholipase A2) EMBV3_35264 CCTCGCCGTGCGGCTCGCGTGCCCAGCAGGATACGAGAAGATGAATTGCTCTGGACTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03604 AGTCTCTTGGCTCGCAGAATAACTCCTTAATACAACATGCTGCCTGTCTCAGTGCCCAGC Gene BVT0102_171752 + 0 NULL GK000002.2:81640210-82928222 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00110376 1 XLOC_066280 Coding TCONS_00110376 XLOC_066280 Coding Coding - 2:81950728-81960626 - TSS81997 9898 1 TCONS_00110376_15 315 0.864518084461507 1 0 2.22268111004706e-06 2.41525833682336e-06 1.1945263964567e-06 6.81477383934649e-07 1.44629332477753e-06 4.30165158993525e-07 3.33720989059164e-06 3.12014671759213e-06 1.41835353634103e-05 0.00170918027754091 0.000652654054820697 0.000800767348777367 0.000418195080595327 0.000785463262363156 0.00028765053084987 0.000525752692220416 0.000983252936694611 0.000190536521708891 2.74115590865889e-06 8.851180709964e-07 8.7836299657774e-07 0.000417592212745305 0.000489796769064865 0.000525590204871831 3.11226352011348e-07 2.53333059052863e-06 1.1528223708568e-06 0.000970193407691117 0.000637097655270299 0.000862053788198154 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 1532 89.32 0.11537684380683 TCONS_00110376_15 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 1e-11 66.2 27.80 0.66984126984127 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 0.0152987152723901 0.774222743277863 GTGAATTTTTTTTTACATAATAGCCTTGGTTTTTTGTTGTTCAGTTGCTCAGTGTCTGACTCTTTGTGACTCCATGGCTGCAGCACACAAAGCTTTCCTGTACTTCACTATCTCCGTAGTTTGCTCAAACTCATGTCCATTCAGTTGGTAATGCCATCCAAACATCTCATCCTCTGTCACCCCCTTTTTCTCCTGCCCTCAGTCATTCTGGGCATAAGGGTCTTTTCTAATGAATCAACTCTTCCATCAGTCCTTCCAATGAATATTCAGGACTGATTTCCTTTAGGATTGACTGGTTTGATACCCTTGCAGTCCAAAGAACTCTCAAGAGTCTTCTCCCACAGCACAGTTCAAAAGCATCAATTCTTCAGTGCTCAGTCTTCTTTATGGTCCAGTTCTCACATCCATACATGACTACTGGAAAAACCATAGCTTTGACTATATGGACCCTTGTGAGCAAACTGTTGTCTCTGCTGTTTAATACACTGTCTAGCTTTGTCATAGATTTTCTTCCAAGGGGCAAACGTCTTTTAATTTCATGGCTGCAGTAATTGTCCACAGTAATTTTGGAGCCCAGGAAAATAAAGTCTGTGGCTGTATCCATTTTTCTCCCATTTATTTTTGTTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGCTAAAAGACAAGGAAGGTCAAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAACCAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATAAAAGGAGGAGCCAAAGCGCTTTCTCTAGGACTCTCTCTCTCCCGCGTGCGCATGCTCTTTTCTTTCTTTCTCTCTTTCTCTCTCTTTCTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCCTAAGAGCTGTAGCACGGTTTGTCCAAGACCCGAGAGCCATGACGCGCCGAGGGCTTTAATGTCTGTTGCTCCAAATCTTTGTTGTGACGAGATGAAGAACTGAGGAACATACACTCGCGTGACATCTATGGTGCCGTGACTCAGATATAACGTGGCTGAAACAACCTCTGCATGGAAGAGGCCAAGCACAACAGGAGCCCAACTCAGCGAAGCTCCCGCGCTAGAAGTGGAAGGCGAAGAAACCCGGCGCAGGGGAAGGCCCATCGTGCTGGAAACAGGGACAGCAAAAAACAAACTCAGCAGAAAGCTCACACAGCCCAGTCTCAGATTCCAGAAGACCTCCGATTAAGGTAAGAGGTCCTCGCTCCTATGGCTGGAGGGATCTTTACAATCTCTCGTTTCTTATTTCCTCGAACCTCCGGCGAACAGGCGGGCGGCAGGGGCACAACTGAGGGACTCTGGAGAGGCTACTCCACAGCATGTCCCAAAGGCACTATCTGCTGAGCCCCAGTAGCTGTTACCCAAGCCGGTGGGGGTTCTTCTGTCCTTTCTCTTCTCTGTGCCAAGGATCAGACCAATGAAACTGTGAGCACCAGTCAGATATTTAGCAAATTTTCCAGCGGGCTATGAAGGGGATTCCTTGGCAACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCCGGCCAAAACTAACGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCCATAAGAGGTAGATTTGTAAGGATCCAGAGAGAAGCAACTCTTCAGGGTGTGAACCATTGCTGAGGGCAAGGGCTGCAGCCATGGAATTAGGCCTGGCTAGGTTTTGTGAGGGGATGGAATTCATATACTAATGAGTGAGAGGATCATCCCAGCCATGGGGAAGCACCTACACCTCCCTCTTTTGACCTTGTGCCTTGGGGCTGTCCTGCCACCTCTGGGTGGGTCTGTTGGCTTATAAATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAACTGGTTTATATCATACCCTTGCACTATGTAATTCTTTCAAAAGTTTTGCTCTGCCCCTTCCCTCCTGTTTCATACTCTTTTCCTGAGCCCCTTCCAGACCCACAAGGTTTCTACAATCTTCTGGAGAGACAACCAGAAAATAGTTGGCCTTGGGAGGGAAATACTCTATAATATACAACCCCTAATCCTACCCAGCATTGTTAACACTGGAGATCTTGGGGACACCCAAACTCCAGTCCGGGGGGTCCCAGGAGGTCATCACGCCTTGACCTGCCTAGGGATCGGTCTTCAAAAGGTTGTCACGCCTCAACCTGTTCGGGGATCCTCTAGTCCCAGGGGTCCCAGGAGGTCGTCATGCTTCGACCTGCCCAGGGACCCAATCCTCTGGAGGCCGTCATGCCTCCACCTGCCCGGGTATTCGATCTCTAGGAGGCTGTCACACCTCAGCCTGCCTGGGGATCTGCACCTTGACCCGGGGACGCCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAGAAGGACTCACCCCTAAGGAAGTCCACCCATGGGAACATAAAGAAGCCTATTACTTGTGGGACTATGCCCAGTCTCAGCAATTACTCAGGAGCCCAATGAGAACTCCATTGCCTTTCTGGAGAGGCTAAAAGAGGCACTCCAAAAGCTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGACAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGATAGCCATCAATACCTTTTATAACAGAGAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAGAAAGAAAGAGACAAGGCATGCCCAGATGCTGGCTGCCCTTCAGAGAAGCCCTATGGCAAACCCCGAGTCCTTGATGGACAAGGCATGAGACAGATGCCTGATCTGTAGACAGGCGGGGCATTGGGCCAAAGAGTGTCCAAACCATGACAAGTCTCCTAGAATGTCTTGCCACAAATGCCATCAACTGGGACACTGGGCGGCACTCTGCCCTCAGGACCCAAGAGCCTCAAGGTCAAGCGCCAAGCCTACCCACACGATGGTTCAAGAGGACTGAAGTGACCCGCTCCAGCCAGCCCGCCTGTCACAGATAACCATCATGGGGCTGGAGCCAAGGGTGCAACTGGATGTGGCAGGCAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACTACTCTGTCTTGATCTCCTACTCTGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTACAGGAAAAGCAATTACTAAAAGATTCACCCAAGCACTTCTTTGTTGCTGGGTTGGACAAATATTTTCCCACCAGTTTCTGGTGGTCCCTGAGTGTCCTACCCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGTTCCTGGTTACTACTGAAGAACCCGTTACACCTTCAATAGAGAGGGACCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGACCAGGGGATTCCTGGACAAGCCCACCAAGCTGAACCGGTCATCATTGTCCTCTGAGATCCCACTCAGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAAAGGCTTGGGAGGGACTATAGCCTTTAATAAATAAATTCCTTACTTGTGGGCTATTGGTCCCTATCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGGAAAAAGACGGAACCTGGCGAATGGTTCAAGATCTCCAGATCATAAATGAAGCTGTAGTCCCCATCCATCCCACAGTACCCAATCCCTATGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTTCATACCACTGGCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACAGCAGCCCACCAGGCCCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTGCCTTCTCCGTACCACTGGCTAAAGAATCCCAATACCTTTTTGCCTTTGAGTGGGAGGCACCAGGAGAAAAACACCAACAGATGACTTGAACAGTATTACCTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGACAGGCCATTAGCCGGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACATAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCATGACTCGAAAACAATTGCAAGCTTTCCTGGGGCTAACTGGTTATTATAGAATCTGGATACCCAATTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGACAAGATGATTCAATCCCACTGATGTGGGAAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAATTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTATGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGGTCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCGATCCAACTACCCGAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATAATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATGGGAGAGGCCATTTATGGATGTCTGATCAAAGAATCCTCAGATATCAAGTAATGCTGATGGAAAATCTGGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTACCTACCCCTGAGGGCTCTCTCCCATTTCTAGAAACCTTGGACCACTGGACAAAACCCCGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCGGGTATGCAGTAGTCTCCAGTTTTGAGACCATAGAGGCTAAGCCTCTGCCACCAGGTACTTCATCCCAATTAGCTGAGCTCATAGCCCTGACTCAAGCTTTAGAGCTGGGAAAATGAAAAAGAATAGCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGACCACTTGACAACCCGAGGGTCCCCAATCAAATATGGTGTTCAGATTCTTCGACTCTTGGAGGCAGTCCATCTGCCCACTGAGGTTTCAGTCTCCCACTGTAAAGGACACCAAAAAGGGAACACAGAAGTGGCACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTACAGAACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCCTTCAAGAAGATCATATGGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTTATTTAGGAGAAAAGGCCCTCCAAAGATTACTAGAAAGTTCCTTCAGAGGAACAGGCCTCCAAACAACTATAAGACAGATGGTCTCCTCTTGTCCCACTTGCCAATTAAACAACCTTCAAGGAGCTCGAAGACCCCACCTGGCCCAGCCCATCCAACGACGTGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGATAGATACATTCACAGGATGGATTTAAGGCTTTCCCACCCGGACTGAGAAGGCTGAGGAGGTGGTAAAAAAACCTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCCAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGCATTGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAGGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAATCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCCACACCCACATTGCCCCTAAGGAAAATGTTGGTCTTAGTCCTTATGAGATGCTATATAGGAAACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATCATGGCCATTGGGCAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAAATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCTCATAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCACGAGTCAAGCCATGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAAATACCTACTCAAAACTACCAATGAGTGCCATTCTAATGAAGACCCCCGAAATCTGGTTTCTGGGGATAAAATTTCTCAGGATAACTCTAAGGAGCCAACACAGCTTGACAGAGACTGTACTCCAAGACAGACAGGAGATAGATCTTCTGAACCCTGAACAAGGAGGGACTTGAGCTATCCTGGTGATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTCATTATGCTATATTGATGATGCCTATGATTATTCCATGTACTGTCAATTGTCTACCTTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTGCAGTTGACCACGGAAAATATCACACTCCCTTGGACACCACTATAAGGACTCTGAGGATTGAGACTAGCAAGAGGGGGAGGCCTAATACCCCTTGCCGCCCCAGTTCAGCAGGAAGTAGCCAGAAAGACCTTGACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGATGTTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCAAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAACCAGAACAAACAGTACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATAAAAGGAGGAGCCAAAGCGCTTTCTCTAGGACTCTCTCTCTCCCGCGTGTGCGTGCTCTTTTCTTTCTTTCTCTCTTTCTCTCTCTTTCTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCCTAAGAGCTGTAGCACGGTTTGTCCAAGACCCGAGAGCCGTGACGCACCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGGGACGAGACAAAGAACCGAGGAACATACACTCACGTGACATTTTCATGAAGGGATGGGACTGGATGCCACTTATAACTTATAGTGAAGAATGTCAGTTTTGTGATCTCTGAAGAAGAAGATTTAGCCTCAGGACCAGCGACCAGGCTTGATCACTCAAGAGCTTTTGTGTAGCAGAGTTTTATTAAAGTACAAAAAAGTGCAGAGAAAGCTTCTGACATAGACATCAGAAGGAGGATGGAAAGTGCCCCTCTTGTTAGTCTTAGCAAGGGAGCTATATACTTTTTCAATTGGCTATTACAGTAAATCAAAAGACTGTCTCAAGGTTGTAAAAGTCTTACCAAACCTTTGCCCACAATATGCATTTTAAGATAATAGGATTAGTCAGAATCCATGTTTCTCCAAAAGGAGAAACATGCCCTCAAGCAGGACACATTGTTGTTATATAATCATTGGTACAGAGTTTAAGTTGTGTTGTTTTATTGTGTAATCATCATCTCTGGGCTTAAAGAAAAATAAGTTTATGTGAATAAGACTAAAGAATGTAGAAAAAAAGTTAGTCCTTTTCTCCTCCTTAAGAGCTTCAGACCCCTCTCTCCTCCTTGAGAGCCCCAGTTCCCTCTCTCCTCCTTGGGGACACCTGATTTCTTATCAACATACCTAGGAATTGACTCTCTCCCCATGATCTTAGTGTTTTGAATGTTGAACTTTAAACCAGCTTTTTCACTCTCCTCTTACATCTTCATCAAAAGGCTCTTTAATTTCACTTTGTTTTCTGCCATAAGGGTGGTGTCACCTTCATATCTGAGGTTATTGATATTTCTTCAACAATCCTGATTCCAGCTTGTGTTTCATATGGCTTGGCATTTTGCATGATATACTTTGCATATAAGTTGTAAAAACAGGGTGACAACATCCACCTAGTTAGGCAAGCAATAGACACTCAGGATCTGCTCCTACAAGTCTCTAAACACTTCCTTTATTCAAAACAAATTAGAAAGACATTAGTATTGATTACAGGAGGAATTCCATGTTCATTTAGGACCTTTTAAAAATGCTACAGTTAAGGAAACTGAGGACAGAAATTAAATGCCTTAGCTGAGCTGTTCAAGACCTACAGTGAAGAAGAAAGCCAAGCCAAGTCTCTTGGCTCGCAGAATAACTCCTTAATACAACATGCTGCCTGTCTCAGTGCCCAGCAGGGGTGATAGGCAAAACTGTATCACACCTGTGATTCATTTCTCTCTGTGTGTGTTGTGCCTCAGTCTTAAAATACTGTATCCTAAGGATTTGTCTTTAAAGATAAAGAACACTGAAGCACTGAAGGAATTCATTCACTCTGAGTTATCTAAGTCTTTAAGAAAAGACAAGAAAATCATAGTAACGGCCCATTGCTTCCAATTTCAGCATCATATTATCACTTGAAATGTGACTGATTGCTATTAACCCAATTATTGCCTATAGATATTTCTCATCTTAGGATGAAATACTAAACCAAAGAATTAAAATTGAGAGGTCTTCCTATGTATTTTATGTAAGGAGCAAAGTAGAGACAACTGTTCATAGATTTTCATTGATGATTCATACATGAAATAAATACTCAATAATATGATTAGTGACTCTTGTAACCATTTCCATATATCATGAGCAAAGTATATGTCCTGGGGAGGCTGTTTTCCCACCACATCTTTTGTAATAAACCTGGAGCTAGTTCTGTTAAAGTACTCGGGGAAGAGAATTCAGTGCTTGCAGAGTGGATACTGCAAGAAAACCCAGTGACCATCCTTCTTTATTCTTGAGCAAACAGTAGCTGAGGTTACTGGATGCCAGAGTTCTGAACAGACTTTTTGCCTTCCATGATCTGCTGATCTTCACAATGGGTTCCAGTGTTTTGAATCAAGCCAAGACTGGCCTGTCAGGAAAATATTGGTTGGAATACTTTTTAATAAAAATAAATATAGTTATGTGGACTCATTTTTATAGCACTTAAGTCATTCTACTGCTGCTCTCATGTCTGAATGTCAGAACACCAAACACCCTCAGAAAATAAATTTTACATTTCCAATGTTGCATAATAAGCCTGGAGCCACTCCAAGCATCATTAATAAAACCTAATGGTAAAACAATAACAAGGAGG TCONS_00105593 TCONS_00105594 TCONS_00105595 TCONS_00105596 TCONS_00105597 . 5' 674902 TCONS_00105593 TCONS_00105594 TCONS_00105595 TCONS_00105596 TCONS_00105597 . 5' 674902 EMBV3_20087 GGGCTGTAACTTCTTCGTTGACACAGTGGTGCTCAGCGACAACCTCACCAAGGACTCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03870 CCTGAGAGTCGTGGTAGAACATCTTATATCTCAAGGCACAAGGAGAGAAATGCAAGCTCC Gene BVT0102_043087 + 0 NULL GK000029.2:37814530-37833098 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165072 TCONS_00165071 1 XLOC_100401 NonCoding TCONS_00165071 XLOC_100401 NonCoding NonCoding LOC100847182 29:37823090-37832978 j TSS123373 434 0.147465437788018 3 0.956407403661374 8.58857886837242e-10 2.3153008914772e-05 2.13075184687659e-05 0 1.13681343118539e-05 8.23612361566411e-06 1.34297265153804e-05 0 1.81676608710448e-05 9.47366937468545e-06 0 0 4.62750580180883e-05 0 0 0 0 0.00371450540938074 0.000479163420984373 0.000314823930711883 0 0.000252810937558356 0 0 1.59540338989598e-05 0.000129857424536585 5.39936335758936e-05 0 7.82927518473386e-05 0 XR_230199.1 LOC100847182 PREDICTED: Bos taurus uncharacterized LOC100847182 (LOC100847182), 0.0 695 90.42 0.997695852534562 NM_024092.2 TMEM109 Homo sapiens transmembrane protein 109 (TMEM109), mRNA. 2e-25 120 86.27 0.225806451612903 0 noncoding 0 0 0 0 -0.821179449615359 0.058040635486201 -0.0465526570268079 0.337889665892112 GCTCTACTCTCCGCTTGCGTATTTATCCCAGGCATTCCCACCGGGAGAATAATGGAGTCGGAAGTTCGAGCTGGAAACGGAAGTCTCTGGCAGGAAAGGGGAAAGTGACTATATCTGGACTATAGAGGTGTATTGTAGGTCAGTGCTGAGGACTTACTCTAGAAGATTTGTGAAACTGGATGAAATTGGAGGTGATGTATGTAAGAGTTCCTGAGAGTCGTGGTAGAACATCTTATATCTCAAGGCACAAGGAGAGAAATGCAAGCTCCTCCTAGAAGGACTTTTGTTCCCCTAGGTTCAGAATTTTGAAAAGATGTTTTATCAAAGCAATTTCTTTAACTATGCAAAAACCAGTTTTGGAATGTGAAACAACCCCATCTTGGCCATTTCAGGGTTTCCTTGAGTTCCCAATTAAATAAATACTTATGGAAGTA EMBV3_01945 TCTTACAGGGGAATTAGAGTATGCTACAAACTTCGCCGACATGAGGTGACCATCTGCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19058 GAAAGAAATAGTTTCCAAGGTGCCGCGGACGCTCAGGATGCGTTTAGGGGAATCGCACCA Gene GeneID:100296148|LOC100296148:XM_002698919:129_cdna Constitutive 0 NULL GeneID:100296148 28 GENE LOC100296148 NULL hypothetical protein LOC100296148 EMBV3_31780 CTGTGCCCCTTCTCTAAGAAAATGCCCTATTTGTAGAGGTACAATCAAGGGTACAGTTCG Gene GeneID:514386|BIRC3:NM_001035293:20_cdna Constitutive 0 NULL GeneID:514386 15 GENE BIRC3 BIRC2 MGC127345 baculoviral IAP repeat-containing 3 EMBV3_08464 TGTCCCGGTATAGCTACCAAAGTCTCCTGGACTGGCCTCATGTTCTTCTACCACTTCAGC Variant GeneID:524183|TMEM164:NM_001031762:28_cdna 134^621 1 EMBV3_09120 GeneID:524183 X GENE TMEM164 FLJ22679 transmembrane protein 164 EMBV3_14283 AAAATGTTCCTCATTTCTCTCAAACCTACTGCATATCTTCTGCCTCATACCGCACCCCCC Gene BVV0102_196117 - 0 NULL GK000008.2:103312889-103392504 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02303 AACAGAGACCTCACAGAGAAACCTTTCGTGCCCAGCACAAGTTGGCACAGGATATGGGGA Gene BVT0102_083839 + 0 NULL GK000008.2:71590579-71663194 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38823 AAGCTGTGTGTTGTGGCTGGTTCGGGAGCGTCACTGAGCATCTCTTGTGTCTCTGAACTT Gene BVT0102_139668 + 0 NULL GK000001.2:148295001-148301004 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005635 TCONS_00005633 TCONS_00005636 TCONS_00005634 TCONS_00005637 1 XLOC_001326 Coding TCONS_00005633 XLOC_001326 Coding Coding C1H8orf42 1:148279154-148302342 j TSS2792 2605 1 TCONS_00005633_1 75 4 0.887825074395135 0.0181366628552193 0.0184222076099136 0.0133180138945395 0.0117443680234872 0.0104969337615941 0.00632127599618672 0.0101560140157751 0.00692002136029191 0.00642017430384313 6.24677609790532e-05 0.000179448946267386 8.80333423473646e-05 0.00258337354233912 0.00225173227192045 0.00329621788751084 0.0239214124490598 0.00292985129527236 0.00766808969296481 0.0109789090928045 0.0156000826832851 0.00592035511429044 0.00526017568631699 0.00617266770769723 0.00524216108902526 0.0142504192121274 0.0153734850047175 0.00634940666480481 0.000692217893142817 0.000371007534809511 0.000895950883926776 XM_002685163.3 C1H8orf42 PREDICTED: Bos taurus chromosome 1 open reading frame, human C8orf42 (C1H8orf42), mRNA. 0.0 4562 100.00 0.970441458733205 NM_175075.4 TDRP Homo sapiens testis development related protein (TDRP), transcript 1e-87 329 81.16 0.132053742802303 0 coding 0 0 0 0 0.0576831125195664 0.605057485013001 -0.0323814297569671 0.521568500905393 CCCCTCCTCTGACCACATGATTGTGACCTCCCCACCCTCTCCTTGAGGACTGTCACTAACTTACGATTAAAAGAAGAGTTGAAGACAGAGAAGAAGTCTGGATTTTGGGACAATTTGGTTTTGAAACAGAACATACAGTCCAAGAAACCAGATGAGATAGAAGGTTGGGAACCTCCAAAACTTGCCCTTGAAGACGTGGCGGCAGACTCAGGCGGCCCTGTGAGTGACCGTGTGTCTCGGCCGGGCTGGCAGGAGGACACCAAGGGCTCTAGCAAGTACACCAGCCTGGCCGGCGCAGGGAGCAGCTCGCGCTGGAGCCTCAGGTCGGCCGGGAAGCTGGTCAGCATCCGCCGGCAGAGCAGAGGCCACCTGACGGACGACTGGGAGGAGCTTGAGTGACCGCCCAGCCCCCGCGTGTCCTCACACCAAAGTCTGCCTGATCGTGCACCTTTGTATCTCATCTCCCTCACATTCCTAGAGTCTGCGGTGTCGTGGTGTTTATTAGTATAGTGTCCCGTTTGGTCTTTCCCAGATGAAAATCACAGAGGATCTGCTCTGTGCGGTTTCATTTGGCTTTCCTCTTCAAAAGCCAAGTGAGGAAATTCCAGGCGTCCTGTGATTTCTCAGTGGACACGCACAGGGTCCACCTGTCATCCGTGTGCTGCTGACCTTAGATGGGAAGTTCACCGCAGTGGGGATTTGCTTTTTGCCACAAAACTGTCTTTCTGTGTCCTGAGTTGCAGTTCTGTGTTCTGTGACTTGATCCCTGTCTCTGCATGTAGCACATACCTGTATCCTATGACACAAGAATGTAGCGGCCACACACTTCTTTTCTGTTGTCAGAAACCTGCAATCCAGGTGTAACGTGAATCTTCCAAAGGTCACGTCACATTGTGCTAGCTCTTTGTTTGTATTAAACCGTAAAATATGCAAGCAAATTAAACGCTGGAGAAGTGAAGGCTGTTATCTGATCCCCAGAAATACACTGTCTGCAAACACAGCTTCACCTCCCACAAGCATATGAGATGGTGACAGTGTTCCCATCTTGAGGTTCCTGAACTTTTAAATACTGATGTTTCTTTTCTTCTAAAGTTTGTTCTTATTTTGATTGCAGACTAAAGAATGCTATAAAGCATGGATCAGTTTTAATAACTTGACACTTAAATTTGTTTGGAAAATATTAACTTGCTAGTTAAGAGTTGAAATTGTAGGTAAAATGCTGAAAGTGCCTCTTTTCTGTAACACCCAGGGTTTTGTTTTTTCAAATGAGACTGTTGGACCCGAGAAGCTGTGTGTTGTGGCTGGTTCGGGAGCGTCACTGAGCATCTCTTGTGTCTCTGAACTTGCTTGTCGTCTCCTTGACAGGTGGGCCCCAGGTCAGGTACACAGCACGTGTATCCTCAGCAAGACAGACCCAACCCACAGGAGGACCACGTGTCTCTGAGGTCAGAACAGATATAGGGGTTTTTGGTTAAAAAGAAAAACCTCCAGTTACACTGTGCATTCCTCTCTTGTGAGAGCCACTATCTTCAAGGTATTCAGTGAGCAGTTCTGTGCTGTTCCACACAAGGGGTGCCATTTAGCATTTCCATGGACTCCAAGGGGTGAAGGGGGTGACAGAGTGCCTGCCTGCCACCTGCCATTTCTCGGTCACTCAGTCTGTGTACACCCTGTCATCTGACTACCAGCCGTCTAGCCACAATCCACGTGTCACCCAACCATCTGTGTCTGTCATCTGTGTAGCGTCTGTCAAAATCACCCATGTCCCTCTCTCTCTAATAGACAAGTGTACTTCACCGAGCCTTGAAAGGGGGACATGTGAGTGGTGGTAAAATCCTGTTTGTGTTAGAACCTTGAAGTGGTTAATAGCGGAGTTGAAAACCGTGTTTCCTCAGGTAAACAGTTCAGCTCATTGACTGGAGTCCTTCTCCCTAGAGACACTTGCTGTGACTGAGATGAGCTGTCTGAAGCAGGAGCTTCGGGCTCATCTTGGGCTAATCCTGTGATGAGGTGCAGGGAAGGGACTTGTGTTTGAGGTTCTGGGCAGAGTGCTCGGGGTGGGGGGCAGGTGGGACAGCCTCCAGCTCGGGGAGCCTGTGCCAGTGTGCTATGATGCTAAGTGCCTGTGATCCCCTTGGGGACACACGTGATGCACAGCTGGCAGAACGGCCCCTCATACCCCTCATTCCTCACAACCAAATGCAAGCCAGAGTGGGGTTGGATTACGCACGTGAATAATACTTTTCTTATCTACAAACATTAATGTAAAAATGAATTTTTCTTCTGTTGTATCTGATTAAAATAACTCTGTGGATTTTAATATAAATATTTATTGGTGTGCTTTGGGGGAAAGATATTTTTTTCTTGATGGAATTTACCAAAGCAACTTTATTTTGTTCACTGGCTGACAAGAGAGCGGGTCTGTCTAAATTCTGTAAACTGCACAGCTTCTCTGAAGAGTGACGTGTCTGCTCTTTTGCCTGTTGTTTTGTCATTAACAGGAAAGTGACTGGTTTTAAAGGAAGTTGAATTCATCCATAATGCTGAAGTTTTTTAAAAATAAAAACATGGTTTATATCCTGAAGGAAAAAAGAAAAAAAAAATC EMBV3_41100 GTGATTATGCACTCAGAGAGAGGGCAGTGGTCAAGCTCCAGTCTTTGGTCCGTATGTGGC Gene GeneID:521051|IQCF2:NM_001077944:205_cdna Constitutive 0 NULL GeneID:521051 22 GENE IQCF2 NULL IQ motif containing F2 EMBV3_40917 GTTGAAGTGGAACCAGGGGAAGGCACTTTTAGGACCAGAGTTGGACACGACTTAGCAAGA Gene BVT0102_068475 - 0 NULL GK000025.2:36644337-36644929 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145365 TCONS_00145364 1 XLOC_088811 Coding TCONS_00145364 XLOC_088811 Coding Coding PPP1R35 25:36643094-36645026 j TSS108954 1429 1 TCONS_00145364_1 189 0.0699790062981106 4 0.262040393578457 0.0158412354454054 0.00682889900480339 0.0109582437672845 0.00801332182094608 0.00646684821020719 0.00395386926759042 0.00636597313276472 0.00829452829960834 0.00773060294477072 0.00128035935198621 0.000638091677822563 0.000140612331059922 0.0010962902287053 0.00144069743198493 0.00298079030894879 0.0077540785905641 0.00285056652562425 0.0043032813853516 0.00497598464621505 0.00578020951411269 0.0037998721023523 0.0021639299872263 0.00177719737361785 0.00180759468326231 0.00563971602995436 0.00514959207648944 0.00604828082561369 0.000757076014542867 0.000368230928169811 0.000571690806215108 NM_001102315.2 PPP1R35 Bos taurus protein phosphatase 1, regulatory subunit 35 (PPP1R35), 0.0 1166 100.00 0.451364590622813 NM_145030.2 PPP1R35 Homo sapiens protein phosphatase 1, regulatory subunit 35 (PPP1R35), mRNA. 0.0 682 82.82 0.451364590622813 TCONS_00145364_1 sp|A6QPM6|PPR35_BOVIN PPR35_BOVIN Protein phosphatase 1 regulatory subunit 35; 2e-127 364 100.00 0.984126984126984 1 coding 0 0 0 0 0.322962687456627 0.0579761122364998 -0.201221073611741 0.119360509829392 AGCGGCGTCTGAGAGGGCGGGGGAGAAGAGGTGGCGGTTCCGTGACCCTTAGCCCCCAGCAACCCCGCACCCCTACAGACGCCGGAAGATGATGGTCCGCTTCCTCCTGGCGCCGCCTTCCCCGGTCCGGTCCGGGCCGCCGCCGGCCGCCGCCTCATCGAGCGAGAAGCCCGAGGCGCCTCAGGACTTGGGGACGCCGGTGCAGCAGAGTAGCCTGGCCCTGAGCCTCGAGCTGCAGGCCGCGAGGGCCGCAGCCGGGGGCCAATTCGATGCCGCGAAGGCCGTGGAAGAACAGCTGAGAAAGTCATTTCAGACCCGCTGCGGCCTGGAGGAGAGCGTGACCGAGGGGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGAGATCTGGTGAGTCTGCAGGTGCCGGAGGAACAGGTTCTGAACGCCGCGCTGAGGGAGAAACTGGCGCTCCTGCCGCCGCAGGCCCGAGCCCCACCTCCAAAGGAGCCACCTGGCCCAGGGCCAGACATGACCATATTGTGTGATCCGGAAACATTATTTTATGAATCTCCACACCTGACCCTGGAAGGTCTGCCCCCGCTCCGGCTTCAACTCCGGCCCCGTCCTTCAGAAGATACCTTCCTTATGCATCGGACACTGAGGCGATGGGAGGCGTAGACCGGGGGTCTCCCTGGATTGCTAGTTCGTATTTTTTGGTGTTGAAACTATTTATCAGAATAAAGTGGTTTTGCTAATAAATGGGACTCTTTTTGGGAGCCTTAACATGGGGTCAAGACTGAGGTTGGAAGCGGTCAGAAAGTCGTTTTGGCCCCCTTTTAAAGAAACTTGGTAGTGATGAGAAGCAGAGCAGGCAGGTTCTTGCTAAGTCGTGTCCAACTCTGGTCCTAAAAGTGCCTTCCCCTGGTTCCACTTCAACTCCATGGTTAACTCTTCCAAAGTCAGCCTGTGCCCAAAGCTTCCACAAAACAAATTTTGTCAGTGGGTTTTTTGGGGGAAGGTAGATGGCTTCTTCAAAATTCACATTATATTCCCTTTTCCTGGCTTAGGGTTTTCTCTATACTCATGTGTAAATAGCAACCCACTCCAGTCGCCTTGCCTGAAAAATCTCAAGGACAGAGGAGCCTGGTGGGCTAGTCCGTAGGGTAGCAAAGAGGGGGACACAACTGAACACATGTAGAGAGGGCTCACTGGCATTCAACAATCTTCCCAACCACTGAAAAAAACACCTGTTCTCTTCTTTAAGACTGTAGTTTGGGCAGAGAGGAAGCACAGGTTCTGCCAGGAGCCACCATCTTTGCCCCCTCAAACTACAGTGTGCCAAACACACGTGTGGGGGCCGCTGCCCTAAACATCAAGTTTATTGTGCTGTTCTCACATTCTGAACCCAACCACCTCTCCCAGTGGGGGACAGCAGAGGGAAGGATTTTC EMBV3_27367 GTCCCAGCCCGTGAGCATCCTCGCGGTCAGGATGTTAAAGTCTTCAGTGAAGACGGGACA Variant GeneID:407210|Grb10:XM_002686637:40_cdna 512^653 3 EMBV3_35062 GeneID:407210 4 GENE Grb10 NULL growth factor receptor-bound protein 10 EMBV3_36778 TTCACCCAGTGATTTTTAGAGGGGGCTGCTCTGAGTCTCTGTTGTGGTTCGCGGGCTTAT Gene BVV0101_045693 + 0 NULL GK000018.2:57127436-57171614 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30243 GTATTTATTGAACGGAAGAAAGGACTGACAGAGGACAATGCAACCTAGTGCTCGCGCGGC Gene BVV0102_019914 + 0 NULL GK000014.2:28697436-28700904 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053072 TCONS_00053075 TCONS_00053078 TCONS_00053073 TCONS_00053077 TCONS_00053074 TCONS_00053079 TCONS_00053080 TCONS_00053076 TCONS_00053071 1 XLOC_031645 Coding TCONS_00053076 XLOC_031645 Coding Coding ASPH 14:28698443-28888279 j TSS39236 5156 1 TCONS_00053076_5 739 24 0.972965996786683 2.19349399178199e-197 1.13767912971585e-207 3.58856628088553e-06 4.19688215725366e-125 6.95457378722104e-06 0 1.41720965477331e-207 3.77352500257807e-165 1.71421185773258e-05 0.000341888235045584 0.00032771302979253 6.1352279727859e-05 4.95756920905891e-24 1.1265245427098e-27 1.3905242523337e-30 0.00265312652067012 0.00165546586469254 0.00142050463477844 0 1.60261087142575e-143 0 0.000216176958162956 0.000825540356602221 0.00113115159244738 1.38108165333868e-294 1.6049191174617e-98 1.80462969282686e-162 0.000301949437665524 0.000153611917186465 0.000128586722356033 XM_005215449.1 ASPH PREDICTED: Bos taurus aspartate beta-hydroxylase (ASPH), transcript 0.0 7526 100.00 0.809154383242824 XM_005251238.1 ASPH PREDICTED: Homo sapiens aspartate beta-hydroxylase (ASPH), 0.0 4150 77.63 0.997284716834756 TCONS_00053076_5 sp|Q28056|ASPH_BOVIN ASPH_BOVIN Aspartyl/asparaginyl beta-hydroxylase; 0.0 1423 98.01 0.998646820027064 9 coding 1 1 1 1 -0.0318997756204653 0.846688032369223 0.0508473905953598 0.42533419610841 CCAGCCCCGAGCAGGCGAGGATCGAGCGCGCGCCGGAGGCACGCGGGCGACAAGTCCTCGGAGGCGCTGCGGGCGGTGCCGAGACACCCGTGCAGCTTCAGGAGCTGCGGCCCTCACCCGCTGCAGCGCCCGCGCACCCCACGCCCGGAGGGAGCCCCCGACCCTTGCCTGCTCCAGCGGTGCGCGCGATGGCCCCGCGCAAGAATGCCAAGGGCGGCGGCGGCAACAGCAGCAGCAGCAGCTCTGGCAGTCCGACCGGCTGCACCAGCGGCGGCAGCAGCAGCCCCGGGGCCCGGAGAGAGACGAAACAGGGAGGACTCAAGAATGGGAGGAAAGGAGGACTTTCTGGAAGTTCATTTTTCACATGGTTTATGGTCATTGCACTGCTCGGAGTCTGGACATCAGTAGCTGTGGTCTGGTTTGATCTTGTTGATTATGAAGAAGTGTTAGGAAAACTTGGAATCTATGATGCTGATGGTGATGGAGATTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCTTAAAGAAAAACCTGCTCCAAAGCCAACAGTGCCACCAGAAGAGGCAGACATGTACCCTTGGCTGGAAGATCAGGTTCTGGAGAGCCCAGGACGTCAGAATATTGAAGATGAAGTATATGAACAAGTTCAGTCACTTGATGAAACAGTATACTCAGAACCTGGAGAGAACCTGCCCCAAGAACCAGAAGGACCAGCAGAAGAGCTGCAGCCCGACGACCATGTCTTTGTAGGAAGTGATGCAGATGACAGATACGAACCCATGGGAACTGGAGCCGTTCATGAAGAAACTGAAGATAGCTACCATATAGAAGAGACAGCTTCGCCAGCCTACAGTCAAGATATGGAAGACATGATGTATGAGCAGGAAAATCCAGATTCCAGTGAACCAGTAGTAGTAGATGATGCTGAAAGAACATACCAAGAAACAGATGATGTCACCTACCGAGACTATGATGAACAAGATCATGCTGTAGATAATTCAAACACAATTTTAGAAGAACCGCACATGCCCCCTGCAGAGGAACAGCAAGAAGTACCACCAGAAACAAATAAGAAAGCAGATGAGCCAGGAAAAAAAGGAAAAGTGAAGAAAAAGAAGCCTAAACTATTAAATAAATTTGATAAGACTATTAAAGCTGAGCTTGATGCTGCAGAAAAACTCCGTAAAAGGGGAAAAATTGAGGAAGCAGTGAATGCATTTGAAGAACTGGTTCGCAAGTACCCTCAGAGTCCAGGAGCTCGGTATGGGAAAGCACAGTGTGAAGATGATTTGGCTGAGAAGAGAAGGAGCAATGAGATCCTGCGCAGGGCCATCGAGACCTACCAGGAGGCGGCCAGTCTGCCTGATGCCCCCACAGACTTGGTGAAGCTGAGCCTGAAGCGGAGGTCAGACAGACAGCAGTTTCTAGGTCACATGAGAGGATCCTTGCTTACTCTTCAGAAATTAGTTCAACTATTTCCTGATGATACTGCCTTAAAGAATGACCTTGGAGTTGGATACCTCTTGATAGGTGACAATGACAGTGCCAAGAAGGTCTATGAAGAGGTTCTGAGCGTGACACCCAATGATGGTTTTGCTAAAGTGCATTATGGCTTTATCCTGAAGGCACAGAACAAGATTGCTGAGAGCATCCCCTATCTGAAGGAAGGAATAGAATCTGGGGATCCTGGTACTGATGATGGGAGATTTTATTTTCACCTGGGGGACGCCATGCAGAGAGTTGGAAACAAAGAGGCATATCGGTGGTACGAGCTGGGGCACCAGAGGGGCCACTTTGCCTCCGTGTGGCAGCGCTCACTGTACAACGTGCAGGGATTGAAAGCCCAGCCGTGGTGGACCCCCAAAGAGACCGGCTACACCGAGTTAGTGAAGTCCTTAGAAAGAAACTGGAAGTTAATCAGAGATGAAGGCCTTGCAGCAATGGATAGAACCCATGGCCTCTTCCTGCCTGAAGATGAGAACCTGAGGGAAAAGGGTGACTGGAGTCAGTTTACGCTGTGGCAGCAAGGAAGAAAAAATGAAAATGCCTGTAAAGGAGCTCCTAAGACCTGTTCTTTACTAGATAAATTCCCTGAGACAACAGGATGCCGAAGAGGACAGATCAAATATTCCATCATGCACCCGGGAACCCACGTGTGGCCGCACACGGGACCCACGAACTGTAGGCTCCGAATGCACCTGGGCTTGGTGATTCCCAAGGAAGGCTGCAAGATCCGATGCGCCAACGAGACCAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGACGACTCCTTTGAACACGAGGTGTGGCAGGATGCCGCGTCTTTCCGGCTCATCTTCATTGTGGATGTGTGGCACCCTGAGCTGACACCCCATCAGAGACGCAGCCTTCCTGCAATTTAGCATTCTGTGCGGGCTCAGGACACGCTGGAGAGAGACCACCTTTTTGGTGCAGTCTCCTTGGATGTGGGCATAGACCTTCAAACACCACAGCCCTTAATTCTCTTGATTTGCAGCCTGAAAAATTCTAAACCTCCTCCCAGGGATGGAAAACACTAAAGGGAATATCTGCCTCACTGCAATTCTTATAGAAAATGCCTGCCGTATTTCATCCATGACAGCCCCCATCTGATGCCTGGATTCCAGGTGAACCCATGATAGCTTCTACCTTGCTGGCCAAAGATATTTTTTTCTCTTAGAATAGGGGGAATCAGTATTAATGAGAATACGTGTAGAAACTGTGAATGGATTGCTTTAGTCTGTAATTTTTCTATGCAACTCTATTTTCCTAAGGTAGCTAGATGGTTTATCATCATACACCACTACTTTTTTGTTGAGTTTAATGACAAGCTGCATAAATACTTCTGTTTAATGGTAACTTTCCTGGTGAACTCAGACGTCCCTATTTTAATTATTTTTAGTAAAGGCACTCATGAAAAAAAAATTATATTTTCCTAATACAAAGCCGAAAGACATAATTATGCCAATGTCTTATGAACCATACTGCTCCCCACTTATTGAGTCTCTTTGCTTTTTTGTCTTCATTAAGAGCTGATGTCTTAATTTTTCTTCTCACTCTGTGAATGGCAGAAATACTGTCAAAAATGGTATTTCTTTCTAAGAGGAACTTTTTACACTGAAAAAGGATCTGGAGTCATTTTATATTTAGTTATAACAACGATGCATGTAAATTTTTTTAATGACAAATATCAGGCATTGTAGGGAAGAAAACAAAAATTTCTCCAAGTGAGAATTTTCTCTTGGGATCAGCTCAATGCGGGGCTGCTAGGATCTCTGACTTCTGGCCCCTTTGCATTTATGAAACAGGGCTGGAATCCAGAGGGTCTTCCACTGTGGATCCTTGTGAATGAGAAGGTCCTTGAAAGGATTCCTATCACAACTTTGCAAAATTAAGAAGGATGACAGAGTGGAAGGCCAAAAATGCCCGGATGTCTGTTCTGGGTATAGGATGTCAAAACTGTTTCCTCTTCACAGTTGTTCGAAAGACTCTGACATCTCCCTGGCTTGAGAAACTTCTGCCATCTAAACTTCACTTTGAGGTGTTAATTATTATTGATAGTTTGGTTTTAAAATTTGCCATTGCTTAGAAAGAACAGTTGCCTACTTGTTCCAAAGATGACCACATCATTAGTTTAGTGGAATATTAATGCATTAAATTTTGTGTGTTTTAAACCAAAGCTAACTAGAAATGTTAGCTATAAGAATGTAATGATATTCATGCACTGAATTTTAAGCCAATATGAACAAAAACGCTAAAGAAATGACACACAGGTTACCACGCACAGGGAGAAAAATCACTTGTGTTTTCCATTGAAGGACGAAGAAGGTTGCTTTCTTTATATCATCAAAAGGAAAAAAAAACAGTTCTTTAAAATGCTATTGGACCGCTTTTGCTTGTCTTTAAGGATATTAGCTTCCCTTTGAAGAGTCTGTAAAATATTTGTCTTGTTTCCTTCTGTTTTGCCAATGCTGAAAAATCTCTCTAAAACAGATGAAGAAGCATTTGAGGAAAAAACATCAGAGTGAACTACCGAAGTCCGGAAGGAAAAGCAAACGCTTGAAAAATGAAAAGGCATGTGTGTCCTTCAGTATTTATTGAACGGAAGAAAGGACTGACAGAGGACAATGCAACCTAGTGCTCGCGTGGCAACGTTCATGTCACTTACTGAATTTGGTTCTGTATGTATATTGCATACACATAAGGAAATTCAAAGTAGCATTGTCACTGTTGAGCCATCATCTTACATTCATTTAATGAAATCATGGAAGAGAGTTAAAAACAAACTCTTAACTTAATAATTATAATATGGTATTTAAAATCAGGTCACTACAGTAGGGTTCTAAATATTGCCAATTGGAAAGCCAGAATTATTATTACTGTTGCAAAATGTTTGGCAATAATTGACTCCAGTAGCATTTTAAACACTTGGATCCCACAACTGTTTCATAAACTCAAGTAATAAAATGGGTTTTCTAATTTGCTTTAATTCTTCATCTTTCCTCCCTATGTTGTGGTATATAAGAAAAGTCATTGCATTGGTAGAATTATTTCAGTATTACTATCTTGTTATTTGAAGTGTCTACACAAAATGAATTGGTTTTATTTATACTGTGATGCAATTGATTGGGAAATATTTTAAATTCTATTTCAATTTTATTTCAAGAGTGGAATACAAAAATCTCTTCTGTTATCATTTTCTACCAGTAGAAAAAAATTAAAACACTAGATCTATTGAGAAAGAGACATGATAAATTATTAAAATTAGTAATAATATCTACTGAGGATGATTATGGCCAGTTTGCCTTTGAATTTTTTTAGCCAACAAATTGACCCTCCCAAATACTTAAAGTGTAAAATCATGTTTTACTGCTCATTATCAACTATTAATTATTTTTTCTTTGACATTGAGCACCAACTGGTCATAGTAATGAAGGCCCATGTCATGCAAATGGCTGGGAGAATAAGAGATATAGCTAAAAACATACAACTGGTTTGGGGAGACATGGCACAAGTAAGGATATCATATGCTATGATATCTGTTTATTTTTATCTAGTTTCCTTTGAATGGATAGCTGGGGACTCCATTTCTAAGGAAAATAAAGAAATAAAATGATCTTTGGCATTTCATC EMBV3_41008 GCCCAGCCCCTGAGCGCCAAACAGAAGAAAGGATGGACAGGAAGAACCTGCTAACATATT Gene GeneID:786599|LOC786599:XM_002689460:12_cdna Constitutive 0 NULL GeneID:786599 8 GENE LOC786599 NULL similar to ADAM metallopeptidase domain 20 preproprotein EMBV3_05974 ATCTTGAACCCTCTCCCCCCAACCTGCGGAGCGGGAAAGACTGAACCCTCTCTACAGAAC Gene BVT0102_316331 - 1 EMBV3_06100 GK000030.2:40838458-40883566 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37227 GCAAGAAGGACCCTAATGCCCCCAAGAGACCACCGTCTGGATTTTTCCTATTCTTCTCTG Gene GeneID:613370|LOC613370:XM_002700130:71_cdna Constitutive 0 NULL GeneID:613370 X GENE LOC613370 NULL similar to high-mobility group box 3 EMBV3_40039 GTGTAGTTAGGAGGAGGGAGGTCCCTAGTCTGTTTCTGCATCTGTCTTTTACCTCGTCTT Gene GeneID:360192|AURKB:NM_183084:451_cdna Constitutive 2 NULL GeneID:360192 19 GENE AURKB MGC142782 STK12 aurora kinase B EMBV3_12544 AGGATCATCATCGGGATCTATAGAATACTTTTCAGCCAATCCTCTGGATTGATTGGAACC Gene GeneID:519915|RFESD:XM_002689397:26_cdna Constitutive 0 NULL GeneID:519915 7 GENE RFESD NULL Rieske (Fe-S) domain containing EMBV3_25612 GGTCCCAACGTATGAGGCGGAATCAAAGAAGGAGGCAGAATCCAAAGAGAAGATAAGCCC Gene GeneID:783058|MGC148328:NM_001080346:2_cdna Constitutive 0 NULL GeneID:783058 9 GENE MGC148328 NULL hypothetical protein LOC783058 EMBV3_21578 AAACAGGTCAAGGAACTTTTCGGTGTGTCAGGAGATGAAACAGCCTGGGGCCAACAGACA Gene GeneID:518495|LOC518495:XR_084689:41_cdna Constitutive 0 NULL GeneID:518495 5 PSEUDO LOC518495 NULL similar to MGC152498 protein EMBV3_10396 AGGCTGATGACAAACCAGAGGGCAAGCCAGATGAGCAGCCACACGACTCAGGCAAAAATT Gene GeneID:614113|MGC127057:XM_002689282:101_cdna Constitutive 0 NULL GeneID:614113 7 GENE MGC127057 NULL hypothetical protein LOC614113 EMBV3_13416 AAACTGAACAGAAGCAGAGCACAGCGCGAGCCCCTGCTTCCTCTTTCACTCCACTGATAT Gene BVT0102_311958 + 0 NULL GK000029.2:33702559-33755351 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163592 TCONS_00163591 1 XLOC_099946 Coding TCONS_00163592 XLOC_099946 Coding Coding IGSF9B 29:33679905-33715034 j TSS122567 5449 1 TCONS_00163592_7 1041 23 0.845536324299704 5.67867653771905e-11 4.08441654930207e-11 3.50686116487872e-11 4.22465367072749e-11 1.35602570045634e-08 2.13206216753956e-11 5.35117040488293e-07 2.43341860326518e-11 3.56404473853424e-11 1.71189203228769e-11 0 1.63296452711713e-11 0 2.48070732780075e-11 1.29094022031374e-08 2.34944471635577e-08 0.00116085107182607 6.75249689380483e-08 3.16758169400278e-11 5.44516478265537e-09 1.33145666568035e-11 2.02704403388116e-08 2.46793929866935e-08 4.44822226912384e-08 3.30330666032332e-11 1.95351117101776e-08 3.17463452635608e-11 4.44341034546277e-11 1.99325278123778e-11 2.47347417308594e-10 XM_002707798.2 IGSF9B PREDICTED: Bos taurus immunoglobulin superfamily, member 9B (IGSF9B), mRNA. 0.0 7029 99.67 0.718296935217471 NM_001277285.1 IGSF9B Homo sapiens immunoglobulin superfamily, member 9B (IGSF9B), mRNA. 0.0 5214 89.52 0.71792989539365 TCONS_00163592_7 sp|Q9UPX0|TUTLB_HUMAN TUTLB_HUMAN Protein turtle homolog B; 0.0 1743 93.93 0.962536023054755 5 coding 0 0 0 0 0.148326422329999 0.433789588132191 0.148326422329999 0.433789588132191 ATGTTAGTGCCTTATCTAGCCACGTGCTTTGTCCTCTGCCAGAGGGGCCGAGGCCCCTCTACCTTCTCAGTGGCCACCCTCCTCAGAGCTGGTGCCCACGGCCTGCGAGAGGAGCCCGAGTTCGTGACCGCAAGGGCTGGAGAGAGCGTGGTCCTGCGATGCGACGTGGTCCACCCGGTGACGGGGCAGCCCCCGCCCTATGTTGTGGAATGGTTCAAGTTTGGGGTGCCCATCCCCATCTTCATCAAGTTCGGCTACTACCCGCCTCACGTGGACCCTGAATATGCAGGCCGTGCGAGCCTCCACGACAAGGCATCCCTACGGCTGGAGCAGGTGCGTGCCGAGGATCAGGGCTGGTACGAGTGCAAGGTGCTCCTGCTCGACCAGCAGTACGACACCTTCCACAACGGCAGCTGGGTGCATCTCACCATCCACGCTCCTCCCACCTTTACAGAAACACCTCCCCAGTACATTGAGGCCAAGGAGGGTGGTAGCGTCACCATGACCTGCATAGCTTTTGGGAATCCCAAGCCCATTGTCACCTGGCTGAAGGAGGGGACACTCCTAGGTGCTAGCAACAAGTACCAGGTGAGTGAGGGTAGCCTGACGGTGACGTCGGTCAGTCGGGAGGACAGAGGCGCCTACACCTGCCGTGCATACAGCATCCAGGGGGAGGCGGTGCACACCACCCACCTGCTCGTCCAAGGGCCTCCCTTCATCGTCTCACCTCCTGAGAACATCACTGCTCATATCTCCCAGGACGCGCTGCTCACCTGCCGGGCGGACCTTACCCCGGCAACCTCACCTACACCTGGCACTGGAAGGATGAGAACGTCTACTTCCAGAACGACCTGAAGCTGCGGGTGCGGATCCTCATCGACGGGACCCTGATCATCTTCCGGGTGAAGCCAGAGGATGCGGGGAAGTACACCTGCGTGCCCAGCAACAGCCTCGGGCGCTCGCCCTCGGCCTCGGCGTACCTCACTGTGCAGTACCCAGCCCGAGTCCTCAACATGCCCCCTGTGATCTACGTGCCCGTGGGGATTCACGGCTACATCCGCTGCCCCGTGGACGCAGAGCCGCCGGCCACCGTGGTCAAGTGGAATAAGGATGGCCGCCCCCTGCAGGTTGAGAAGAACCTGGGCTGGACTCTGATGGAGGACGGCTCCATCCGGATCGAGGAGGCCACAGAGGAGGCTCTTGGCACTTACACCTGTGTGCCTTACAACACCCTGGGGACCATGGGCCAGTCTGCCCCTGCGAGGCTTGTCCTGAAGGACCCCCCGTACTTCACGGTGCTACCGGGCTGGGAGTACAGGCAGGAGGCCGGCCGGGAGCTGCTCATCCCCTGTGCCGCGGCTGGGGACCCCTTCCCCGTCATCACCTGGAGAAAGGTAGGGAAGCCCAGCAGAAGCAAGCACAACACCCTGCCCAGCGGGAGCCTGCAGTTCCGCGCCCTGAGCAAGGAGGACCACGGGGAGTGGGAGTGCATCGCCACCAACGTGGTCACCAGCATCACTGCCAGCACCCACCTGACCGTCATCGGCACCAGCCCCCACGCCCCGGGCAGTGTCCGGGTCCAGGTCTCCATGACAACTGCCAATGTGTCCTGGGAGCCAGGCTACGACGGAGGATTTGAGCAGACATTCTCTGTTTGGATGAAGCGGGCACAGTTTGGGCCCCATGACTGGCTGTCCCTGCCCGTGCCTCCGGGACCCAGCTGGCTGCTGGTGGAAGCCCTGGAGCCCGAGACAGCGTACCAGTTCAGTGTCCTGGCCCAGAACAAACTGGGCACCAGCGCCTTCAGTGAGGTGGTCACTGTGAACACTTTAGCATTCCCTGTCACAACTCCAGAACCCCTGGTGCTGGTTACCCCACCGAGGTGCCTCACAGCCAACCGGACCCAGCAGGGCGTGCTCCTGTCCTGGCTCCCACCTGCCAACCACAGCTTCCCCATCGACCGCTACATCCTGGAGTTCCGCGTCGGAGAGCGCTGGGAGACACTGGACGATGGCATTCCTGGCACCGAGTTGGACTTCTTTGCCAGGGACCTATCACAGGACACGTGGTACGAGTTCCGGGTCCTGGCCGTCATGCAGGATCTGATCAGCGAGCCCAGCAACATTGCCGGCGTCTCCAGCACAGACATCTTCCCGCAGCCGGACCTGACTGACGAGGGGCTGGCTCGACCGGTCCTGGCTGGCATTGTGGCCACCATCTGCTTCCTGGCCGCAGCCATCCTGTTCAGCACCCTGGCCGCCTGCTTTGTCAACAAGCAGCGGAAGCGGAAGCTCAAGCGCAAGAAAGACCCTCCACTCTCCATCACACACTGCAGGAAGAGCCTGGAGTCTCCCCTGTCCTCTGGCAAGGTCAGCCCTGAGAGCATCCGCACGCTCCGTGCCCCGTCCGAGTCCTCCGATGACCAGGGCCAGCTGGCAGCCAAGAGGATGCTGAGCCCCTCGCGTGAGAAGGAGTTGTCCTTGTATAAGAAGACCAAGAGGGCCATCAGCAGCAAGAAGTACAGTGTGGCCAAGGCGGAGGCCGAGGCGGAGGCCACCACGCCCATCGAGCTCATCAGCAGGGGCCCTGATGGCCGCTTCGTGATGGACCCCTCTGAGGTGGAGCCCTCCGCCAAGGCCCGGCGCATAGAGGGCTTCCCTTTTGCTGAGGAGACCGACATGTACCCCGAGTTCCGCCAGTCGGACGAGGAGAACGAGGACCCGCTGGTGCCCACGTCCGTGGCTGCCCTCAAGTCCCAGCTGACCCCTCTGTCGTCCAGCCAGGAGTCCTACCTGCCACCACCAGCATACAGCCCTCGGTTCCAGCCCCGTGGCCTGGAGGGCCCCGGTGGCCTGGAGAGCCGGCTGCAGGCCACCGGTCAAGCCCGCCCGCCCGCCCCCCGGCCCTTCCAGCACGGCCAGTATTATGGGTACCTCAGCAGCAGCAGTCCAGGGGAGGTGGAGCCGCCTCCCTTCTACATGCCGGAGGTGGGCAGCCCCCTGAGCTCCGTCATGTCCTCGCCGCCCCTACACGCCGAGGGGCCTTTCGGCCACCCCACCATCCCCGAGGAGAATGGAGAGAACGCTTCCAACAGCACACTGCCCTTGACTCAGACGCCCACGGGTGGGCGCTCCCCAGAGCCCTGGGGCCGGCCGGAGTTCCCCTTCGGGGGTCTAGAGACCCCGGCCATGATGTTCCCCCACCAGCTGCACCCTTGTGAAGTGGGTGAGAGCCTGCAGCCTGCGACCGGCCTCCCCCGAGGACTGCCGCCCGCCTCCCTGCAGATGCCTGCAGCCTACCCAGGCATCCTGTCTTTGGAGGCGCCCAAGGGCTGGGCTGGCAAATCGCCAGGCAGAGGCCCCGCCCCAGTGCCCCCCACAGCCAAGTGGCAGGACAGGCCTGTGCAGCCTCTCGTGAGCCAAGGGCAGCTGAGACACACCAGCCAAGGCATGGGCATACCCGTGCTGCCTTACCCCGAGCCGGCCGAGCCGGGGGCACACGGCGGCCCCAGTGCGCTGGGCCTGGACACTCGGTGGTACGAGCCCCAGCCCCGGCCCCGGCCCAGCCCCCGGCAGGCCAGGCGCAGTGAGCCCAGTTTACATCAAGTGGTGCTACAGCCCTCCCGGCTCTCGCCTCTGACCCAAAGCCCCATCGGCTCCCGCACCGGCTCCCCTGAGCTGGCCGCGCGGGCCCGGCCCCGCCCCGGCCTCCTGCAGCAGGCTGAGATGTCAGAGATCACGCTGCAGCCGCCGGCCGCCGTCAGCTTCTCGCGAAAGTCCACGCCATCCACGGGCTCCCCATCCCAGAGCAGCCGCAGCGGCAGCCCCAGCTTCCGGCCCACTGTGGGCTTCACCACTCTGGCCACAGCCTACCCCTCCCCTCCGCCGGGCCCCACAGGGCCTGCGGACAGCTTGGATGTGTTCGGACAGACGCCTTCCCCTCGAAGGTTGGGGGAGGAGCTGCTCAGACCGGAGCCCCCCGCTCCACCCTTACCGAGTTCAGGGAAGCTGCAGACATACAGACAGACAGACAAGCCCCTGCGATCAGCCGGCCTGGGGGAGCCCACTGTAAATGGTAGCAGCTGGTGTGCCAGCTATCTGGGCAGTGTTGTCGAGACAAGCCTCTCTTCAGCTCAATAGGACACATCCGCCTGCACCCGGGAATGCTGCTGCACCTGAGAGGCTGGAGGCTCTGAAGTACCAACGGATAAAGAAGCCCAAAAAGTCATCCAAGGGCTCCTCGAAGTCAAAGAAACGATCCGATGGTTCTGCCTCCCAGGCTCAGCACCTTCCAAACTCTCAGGTCCTGTGGCCCGACGAAGCTGTCTGCCTCCGGAGGAAGAAGAGACATTCCCGGCCCGACCCCTTCGCCCGTCTGTCGGACTTGTGCCACCGCCAGCTCCCAGAAGACCAGAAGGCAATACTCAGTAGCGTGGAGCACGACGACCCCGGCCACGCCACTCTGCTGTGATGCTGCCACTTAGGTGTCCCCTGAGTGAGGCTGCTGGCTGAGGGGCAAGGGCAGGCACGGGGTGATGGGTGTGTGGGGCTTCGTCCTCCCCTTCCAGGGGAGTGGTGGTCCAGCTGTTGGCTTCCAGGGCTGCTCAGACCCTGGCTCCACTTGTTCTCCCTCTGGCCTGAGTGGGCCTCTCCTCCGCCTCCCGGCCTGCTGGCCTTGTGTCCGGGAGAGAGGGCAGAGGGCTTGCTGGCCGCCGTGGCTGTGGGTGGAGTTTGGGCAGTGAACTGGGGACAGGGGGAGACTGCCTCCTCCCCCCCTCTCCCCGCTTCACTAGGTGGATTTCTCCACCTCCTCAGATATCAGTGGAGTGAAAGAGGAAGCAGGGGCTCGCGCTGTGCTCTGCTTCTGTTCAGTTTCTCGAGTCCTGAAAGAGGGCTGGACTCCGCCGTCTTCCAGACTCCACATATATATAGCTATAGATGCAAATGTGTATGTGTGTAGTTTGTGGGTTTCTCTATGTATATATATGTATGTGGGAGCAACTGCTCACTTCTGTGGTCAGGGGAAGGAGGGGGAGGGCAGCTGGCGTGTGGGCTGGGCAAGGAGGACTGGCGGGAGCTAGCGGGGGCCCTGGTGTCTGTCTCGGGAATGAGTCCCACTGAAATGGGGTACATGCCTTCTCATCTGGGTCCCCCGTTTGTCTTGACCTCATCGCGTCCCGGGCAGAGTGAGGGCTTGCCACGGTGACTGCTGCCCGTTCTGGGGGCTCAACAGTCCGTTACCATGGAACTAAACACCGCCTCCATTTCTTGGTCCTGGGCAGAGAAGGGTGTCTGGTGGGTGGCCAGGCGGGCATCTCTCTTGCTTTCGTGGTCTGGCTCGGAAGTGAAGCTGCTTAGCAGCGGGGCCGGGGGTGGCCCTGTGCCCAGACTGGAGCTCCTCATTAGCCCCTTGGGTCCAGCCGGGCCCAGAGCCCTGTGGCCGGGGGCCT EMBV3_24852 CCTCCTTCCTGCCTTTTACTTTCATGTGGGTGTGTGAAACATTTGGTTGGAAACTAGCTG Gene GeneID:506270|PTK2:XM_002692574:259_cdna Constitutive 0 NULL GeneID:506270 14 GENE PTK2 FADK PTK2 protein tyrosine kinase 2 EMBV3_37084 TAGACAGGTCCGTTCACGTCTAGAGGGTTTACGAGAGCAGCTTGATGGCCTGGAAAAGAC Gene GeneID:517515|CCDC51:NM_001015619:184_cdna Constitutive 2 NULL GeneID:517515 22 GENE CCDC51 NULL coiled-coil domain containing 51 EMBV3_10066 GTGCAAAAAGTCAAGATTTCCCCAGTGTTTTGTTGTCTGTTGTACCTGCTGAAACTACAG Gene GeneID:541058|RFX7:XM_002690886:13_cdna UTR3_Alt 2 NULL GeneID:541058 10 GENE RFX7 RFXDC2 regulatory factor X, 7 EMBV3_11382 GCTAAGCGCCACCGCAAAGTCCTTCGTGATAACATCCAGGGCATTACCAAGCCTGCTATT Gene GeneID:527645|LOC527645:XM_002697470:110_cdna Constitutive 0 NULL GeneID:527645 23 GENE LOC527645 NULL similar to Histone H4 replacement CG3379-PC EMBV3_21746 GCATCTGAGGCTGGTCATCCGCACCCAGGACCACGAAGGTCATGAAGGCACTGTTGATGT Gene BVV0102_178752 + 0 NULL GK000003.2:92260699-92272943 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174044 TCONS_00174036 1 XLOC_104506 Coding TCONS_00174044 XLOC_104506 Coding Coding - 3:92264822-92271530 - TSS129244 904 1 TCONS_00174044_2 218 0.180309734513274 7 0.866259132249888 1.50505454374896e-05 3.60456029250103e-05 0.000144690442145551 0 0 0 0 5.29706910885946e-05 0 4.10502745530542e-13 1.89908664602979e-05 2.6853047004706e-06 0 0 0 0.000419409788120832 0.000110191955447024 0.000859141102659039 0 3.18204130947124e-05 2.01485681444799e-05 0.0014112323190697 1.15556694470966e-05 0.000110056668172579 0.00068978072323366 0 4.32025519769734e-06 3.71613235975761e-05 0.000144078091550518 8.52920065089887e-06 NM_001192607.1 ACOT12 Bos taurus acyl-CoA thioesterase 12 (ACOT12), mRNA. 1e-44 185 73.68 0.32853982300885 NM_015547.3 ACOT11 Homo sapiens acyl-CoA thioesterase 11 (ACOT11), transcript variant 0.0 910 92.44 0.686946902654867 TCONS_00174044_2 sp|Q8WXI4|ACO11_HUMAN ACO11_HUMAN Acyl-coenzyme A thioesterase 11; 6e-141 412 96.52 0.917431192660551 1 coding 0 0 1 1 0.0280000853127593 0.811112808201998 0.00286892170895749 0.951554069125201 CTGGAGAGCAGAGATTGTAGCCACATGGTGCCGGCCGAGAAGACCCGGGTGGAGAGTGTGGAGCTGGTCCTGCCCCCCCACGCCAATCACCAGGGCAATACTTTTGGGGGCCAGATCATGGCCTGGATGGAGAATGTGGCCACCATTGCAGCCAGCCGGCTCTGTCGTGCCCACCCTACCCTGAAGACCATTGAGATGTTCCACTTCCGGGGTCCATCCCAGGTTGGGGACCGTCTGGTGCTCAAGGCCATTGTGAACAACGCCTTCAAGCACAGCATGGAAGTGGGCGTGTGCGTGGAGGCCTACCGCCAGGAGGCCGAGACCCATCGGCGGCACATCAACAGTGCCTTCATGACCTTCGTGGTCCTGGGTGCGGATGACCAGCCTCAGATGCTGCCCTGGATTCGGCCCCAGCCTGGGGATGGCGAGCGACGGTACCGAGAGGCCAGTGCCAGGAAGAAGATCCGCCTGGACAGGAAGTACATTGTGTCCTGTAAGCAGGCGGAGATGCCCCTCTCTGTCCCCTGGGATCCTAGCAACCAGGTGTACCTGAGCTACAACAACGTCTCCTCCCTGAAGATGCTTGTGGCCAAGGACAACTGGGTGCTGTCCTCGGAGAGCAACCAGTGTGTAATCCTGCTAGTGTGGAAAACACATGAAGTTACATCATCGCGACAGTAATCAAGATACGGAGCATTTCCATAAACCTCCGATTTTTCTGTCTCCTCTGTGATCAAGCCTCTTCTCTCCCAATCCCTGGAAACCACAGACCAGTTTTCTGTGCCCTTTGTTCGGTCTGTTTGAGAATGTCCAGTAAAGGGAGTCGTGCAGCATGTAACCTTTGACGTATTTCCTTAGGCACAGTGCATTCACTTGTGTGAAGGGATGAGTGTGTTCCGTTTCA TCONS_00170660 TCONS_00170661 TCONS_00170665 TCONS_00170658 r 3' 4120 TCONS_00174045 TCONS_00174046 TCONS_00174047 s 3' 1414 EMBV3_00352 CAGTTGTTCTCCCTCCCCAAGGACTTTTGGCAACAGGAGGTTCATGACATTCGGAGCTAT Gene GeneID:282856|PCK2:XM_002690499:463_cdna Constitutive 1 NULL GeneID:282856 10 GENE PCK2 NULL phosphoenolpyruvate carboxykinase 2 (mitochondrial) EMBV3_33085 AGGGCCTCTGCCCAACGTCTACAAGGTTTTCCTGCTCTTCCTACAAAGGTCAGCATCACT Gene BVT0102_248224 + 0 NULL GK000022.2:11894087-11906822 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126074 TCONS_00126071 TCONS_00126069 TCONS_00126075 TCONS_00126073 TCONS_00126072 1 XLOC_077363 Coding TCONS_00126075 XLOC_077363 Coding Coding ACVR2B 22:11888632-11904016 j TSS94664 10988 1 TCONS_00126075_2 274 0.0546050236621769 7 0.286160046804914 1.59496929243673e-05 2.00686711450937e-22 0.000145935415352253 8.12663016941469e-17 1.04080712743806e-07 0.000200983938335249 0.000330563679002446 0.000282495160378942 0.000591456520113974 0.000286623780144912 4.95685754187075e-27 0.000189845936466946 0.000124099327046053 0.000265241980808956 0.000185371770469961 0.00463965388149292 0.0043900433364223 0.00241161761948814 0.000343333008794111 0.000687556440702019 1.60954719601583e-34 0.000212834508614186 0.00197451193133222 0.00155644181188361 0.000604786299959735 0.000428299284331234 2.09737648459862e-05 0.000798720494440225 0.000173687133977568 0.00075358730609616 XM_005222373.1 ACVR2B PREDICTED: Bos taurus activin A receptor, type IIB (ACVR2B), 0.0 1817 100.00 0.0915544230069166 NM_001106.3 ACVR2B Homo sapiens activin A receptor, type IIB (ACVR2B), mRNA. 0.0 3553 77.38 0.415544230069166 TCONS_00126075_2 sp|Q95126|AVR2B_BOVIN AVR2B_BOVIN Activin receptor type-2B; 0.0 564 100.00 0.996350364963504 2 coding 0 0 0 0 -0.0488820804816124 0.756559669121551 -0.00194591796166699 0.966884801620354 GCCTGAGCCCTCCTGCCCAAGAGCAGTCCATACCCTGTGTAAGCGGGGACAAGCAGTCGTGGCAGAGTGAGCGGGAGATCTTCAGCACGCCTGGCATGAAGCACGAGAACCTGCTGCAGTTCATTGCCGCTGAGAAGCGAGGCTCCAGCCTGGAGGCAGAGCTGTGGCTCATCACGGCCTTCCACGACAAGGGCTCCCTCACGGATTACCTCAAGGGGAACATCATCACATGGAACGAACTGTGTCACGTGGCAGAGACGATGTCTAGAGGCCTCTCATACCTACACGAGGATGTGCCCTGGTGCCGGGGCGAGGGCCACAAGCCATCTATTGCCCACAGGGACTTTAAGAGCAAGAATGTATTGCTGAAGAGTGACCTCACTGCTGTGCTGGCTGACTTTGGCCTGGCTGTTCGGTTTGAGCCAGGGAAACCTCCGGGGGACACTCACGGGCAGGTGGGCACGCGGCGGTACATGGCCCCCGAGGTGCTCGAGGGAGCCATCAACTTCCAGAGAGACGCCTTTCTGCGCATCGACATGTACGCCATGGGGCTGGTGCTGTGGGAGCTCGTGTCCCGCTGCAAAGCTGCCGATGGACCTGTGGATGAGTACATGCTGCCTTTTGAGGAGGAGATCGGCCAGCACCCGTCACTGGAGGAGCTGCAGGAGGTGGTGGTGCACAAGAAGATGCGGCCCGCCATCAAGGATCACTGGCTGAAACACCCGGGCCTGGCCCAGCTCTGCGTGACCATCGAGGAGTGCTGGGACCACGATGCAGAGGCTCGCCTGTCTGCGGGCTGTGTGGAGGAGCGAGTGTCCCTGATCCGGAGGTCGGTCAACGGCACTACCTCGGACTGTCTTGTCTCCCTGGTGACCTCCGTCACCAATGTGGACCTGCCCCCGAAGGAGTCGAGCATCTAAGCTCAGGACACGAGTGGATCTCCAGACTCAGTAGATCTGAAGAGGAAAGGAAAAAAAAAACAAAAAAAAAGTTGTGTTTTGTTTTGGAAATCCCATAATACCAACAAACACATAAAATGCAGCTGCTATTTTACCTTGACTTTTTATTATTATTATAATTATTATAATTATTATTATTAATATTATTTTTTGGATTGGATCAGTTTTTACCAGCACATTGCTCTACTGTATCGCAAACAGCGGACACGTCAGCAGGCGTTGAGGTGCTGAGCTGTGAATGCAGAACCAGCGCCATGCTGAAGAGCCTCGGCCACCTCCCGCCCTTCGGGGTCCATTTTTCCCCGCTTTCTCTTTGTTTGTTGTCTCAGAACCTGTGACACAAAGAAACCCATCCTGTCTTAGGAAACTTAATGCTGCAAACTCTACCTAGAGGAACCTTTGAAGACTGTTACATAAGAACACATCTTCCTCATGGGAGGAGTTTCCCTCTGCCCTCATCCCCCTCCCGCCTCGCCTTTTACTGTGTTTTTCTCCCTTTTTAGACAGTGAGTTTAAGAAACAGCAGGCGTGTCTTTTCACGGATTAACGGGTGTTGTCCTGACCGAGGAAAAACTGGGCTGAGGATGAGGATGGTTTGGACTGGAGGGAGGACGGAGCTGGGGGTGGGTTCTGGAGCAGAGTTACACTGGACTCGGGCACACTCGGAGCAACATCCTTTGCTATGAGACTACTTCTCAGGTAACCCGGAATCGAGGGGAAGGATAGCATGGAGGCCGAGCATGAACGGCAAGAGCGGGGTTTGGAGAAAGTCTGAAATCAGGTGTGGCTCTGGCCCATCTGTGTGCCCTGTCCAGTTTTTCTTTTCACCCATTTGGGCTTGGGCATAGGACACAATATTTTTTTCTACCCTGATTTTAAGGTTCAGCGAGGGTAGAAATCATCACGGTTTAGTGAGTACAGTCTTCATGAGACATTATACTGTAAATATCTATAATGGAGGAAAAGTTGAAATAGTTTCCTCCTGGAGCAGTTCAGGGAAATGGCCACGGGGGGGCGCCCTGCACAGCCGGGGCGAGAGGATTTCCTGGGTCTGGCCTGGCCAAGGCCTGTCTCTCTGGAGAGCCCCAGAGTCCTGCAGCGCTGGCTCTGTCTGTCCCTTTATGTAGCTTGTGAACACAGCTTTCTCCAGACCCCCTTACAAGAGGTGCATATTCGAAAAAACCGTTTCTCTGTTTTGCCATAACCTTGCTCTCGTCAGTGAATGTTCCTAATGCTGCTGTTTCAACCTTTGACTTTTTTTTTTTTAATTTATGAAACATGCAAATTTTTAAAAGAAAAACAAAACACACACATCCACACAAATGCTTTGCTATGTGGCTTCCGAGGTTTAAATTTTGAAAAGTAAAAGAATTAAAACTTCACGACCACAGACCACCTCAAACCAGAAATACCTCAGAATTTTCTACTTGTGTAAGGTTTATTATATATTTTATTAGTTGTGTTGTCTCGTAGTAAGTATATTTTAATGTAAGTTGGCTTTTATGACAAGAAAGTTTAAAAGAAATAGAGAAAAAGAAAAAAAGTTGTGAGTCTTCTAGGGAATGCTCCCGTTTTTCGTTGATAACATCCCCTTGTAAATAATTGTCATCCACTGTGGGTTGGCTGTCTGGGCTGAGTCTGGGCATTCATCACTCTTATTGTGAAGGCGTTTCCTTCCCATTGCTTTAGACCATTTTATGTGAAAACTGGATCTCTTCACCTGGAGGGTAGGCGAGTTGGTGGGCAATGGGGAGAGGTTGACTGGGGTGAGAAGGGGGGTTGCCTCCTCCTGAGTTTTTTGGAGGTTCCGCTGTTTCCCTCGACTTGAGAGGTCATTGTTCAGAATGACGGGCGACCCCACTTTAACCTGGGAAAACTGTGGCCTTTAGACCCCCATGAGGTAATTTTACTTGAGACTTAATTTCTTAAGCAAATCAGCGGTGGCGCAAGGGGAACTGACCGGCAGGTCCCTGGAGCCGCACTGCCCGGGCTGCCTGTGACGGCCGGGCCGGGTGGCGGGGGCGCTGGGCCCCCCAGGCTGGGTCCTCCTCTGCGTGTTTGGACACAGTGCGGTGGGAGGTGAGCTTTGCTTCATGGGTCAAAATGTGAGCTGGCCAGAGTGGCTCCAGGGACAGGTTTTTGTTTTTTTTAGTAAGTTATTTGTCTATTTCTTCTTCCTTTTCTTTTTAAAACTATTTTGTGCTGTGGTATTTTTTCCTCCCTCGGAATGATTTTTAACAGCAAAACAGGCCTTACAGCAGTTGCTTTTCTTTTCCACTTATTTCTTTCAGAAGCTTTAAAATATTTATTAAAAAGTGCCATATCTGGTTTCTCCAGCTTTTTCCTTATTTAGGTAGGCAGTGCTTGGCATCTCTACTTTTCAACCCTCAGAAGAAACAAATAAACCACTAAGAAATGTAGCTGATTTCCGACAGGAATGATCAGATCCCTGATCCTATCCCGTGTGGAACACTGAAGCCCAGCCTCTGTTTGGTTTTAGGTTTCCTCTGGGCAGTTTTTCTTTTGTGTGCTGGCTTGATTCTCCGGAGAGCAAGTTTTGCCCTGCTATGGGGCCTCTTTAGGCTGAGGCAGGGATTGGGGTCCCCCTCTGCTGGCCCTGTGCCCAGCCACTGTCACTTCCTCAGGGCCGTGGCACCAGAATGAGGTGTCAGGAATTGGCTCCCGGGTGGCGTGTCTTGGCAGAGGGCTTCTGGTGGCGTGCTGTGCCGAGTGTCCCTGCCCATGATCGTGGCCAGGAGAAGGTGGGCGTCTCTCTCCCAACATGCCGCTGGGGCCTGGGGGGCTCTTCTGCCTCTGATGAAGTCATCTTTGTCCTCACGAATCCTCTGGGGAGCCAGCCATCCGCGGCTCCAGCTTGTGCCGACAGGCTTGTGGGGCTCAGCCTGTGCTCATCTCCACAGATGCTTCACGCACTCTCCATTTCCAGGGAGCTCATATCACTCCTACATTTTTTTTCTTTCCCTCCAAGCTCTGTGGAAGAGTGAGAGCTGTGGAGTCTGGTCTCATCGTCCCTGCCCCGTTCAGGATAGGAGGGTGGCCAAGTCAGAGGACAGAAGTGGCCCAGGACCCCTGCCCCTTCCTCCAGAGTGTGCTGTTGTCCAGTCAGGCTCCTGGCTGTGGAGAGTGTCTTCTCTTTGGTCACTCGTGGAGAGGTCTCCACTCACTCCAGTGTTCTTTCTTGGAGAATCCCAGGGACAGAGCAGCCTAGTGGGCTGCTGTCTGTGGGGTCGCACAGAGTCGGACATGACTGAAGCGACTTAGCAGCAGCAGCAAGGGAGGTCTCCTGAGCCAGAGGGAGCCAGGAGTGAGCAAGGGAAGGAAGAGACACGTGGGGACAGAGGTCGCTGTGTCACAGTGTCCTGCAGAGGACTCTTCATCACAGGCCATGGAAGGGCATGGGCGTTAGCACATCCTGGGGCCATTGGTCCCTCCCAAGGACTCAATCAGAGTCCTTCTCTGGTTGAATTACTTGGGGTGAGGGCCACAGCCAGGTCCTTCTGAGGAGGAAGGGAGACCCAGCCCGGTGGCAGTGGGGTAAGCGCCGTGAGCCTGGTGTTCAGATGGACTTCTTGTTTTCTTGGCTCTCAGTAGGGACCCCAAGGGCTCAGTCCTGCTGGGGAGGCTTCCTTACACGGGCCAGCTGCTTCTGATGCAGACTTCATCCTGTCTGCAGGGGGCGGCATGTGTCCAGAAGAAGAGGGACCTTGTGCAGCCTCGGACAGCCTCAGGATGCTTGAGCCGCCCACTCTTGCTTTCTCAGCCAAGGGAAAAATTTGCTATCTCCAGGCCCCCGAGGTGGTTCTCCCTCTGCCCCCAGGGACCAGGCCGACCCTCCTGTCATGGCTGGTCCCTGCCTTAGGGAGCTGAGCAGGGGATCCTGCAGTTCTCTGTCTCCTTTCTCTCCAGCTGGCCGCCGTGCTGCTCCTCTTTGGGTGCTTGGGCTGCGTGTGTGATGTTTCCTCCATGGCAGGCCGAGCCGTGTATTGAGGGTTATCCACCATATGTCGTGTATGTAGAGCCCCATCCCGTGGTCCCTGTACTCTGAACCATGAGGCCAGGGAGGGGGCTGTTCCACTGGGGTGGGTGGACTAGATGGCTCTCTTGAAAATGGAATTCTGCCTTTTCGAGAATACAATGTGAAGTTCCCAGCATCTGTTGGCAATACAGGGATTTCATGGGTTTTTTTTGAAGTAATATAGTGAGCGTACGTACGTAAGTTTTTAGAATTGGTACTAGAAGTGAAGGGGCTTCCCAGGTGGCGCAGTGGTAAAGAATCTCCTGCAATGCAAGAGACGTGGATTCAGTCCCTGGGTGGGGAAGATCCCCTGGAGTAGGAAATGGCAACCCACTCCAGGATTCTTGCCTGGAAAATTCCATGGACAGAGGAGCCGGGTGGGCTGTAGTCTGTGGGGTCGCAAAGAGTGGCATGTGACTGAGAATGCATCCTAGCAGTTGAACAGCCGGGCATTATCACAGAGAACTTGGCTTACTAAAAAAATACCTAACCTGGAAAGCATTTTCCGGGAGTTAACTCCGTTTGTCAGTCCCAGCTGTTGCTGAATCTTTGGAGAGATGGCCAGGCCTGCCTCAGACCTGACTCTTCAAGAAGCACAGGGAACTGACTGACTACCCCCGCCCTCAACCCCATCCCACTCCCTCCCCTTTCGGTTCAGGGCAAGCGGCCAAAAAAGAAAAGGAGACAAGGTGGCTTTTTCTGGTCAATGGCTGTTTACAAAAGCTGGACTAGTATAATACTCAGCAGCTAATGTGTTCAGCCTAGGAATGATGAGTTCAAGTCTCAATCAGGAGTTATGTTTTAGGCAAAAAAACCGGCCCAGTGATTCCGTTGATGAACTGTTTGTTTTTCTTCTTAGTCTAGATTTGTAAACAATGAATTCAGGGTTATAGGCATGTTCTTTAAGTAAGATTCCTGACAGTTAATTTGCAACCAGCAATCCACCTATGAATGTATCCCAGACCTTTAGGAGGCTTGGGGAAGTTTTTTTTTTTTTTTTAAAGAGGATTTAGTTTTGTAGCAAAAATAAATGGAATTTTAAAATGCACCCCTTCCCTTGGAAATTAATTCATGTGACTCAGCCACACTTGAAAAACAATTACAGTTGGCCCTCCGCATCCATGGGTTCCTCATTCTCGGGTTCATCCAACCTCGAATCAAAAATATTTTGGGGGAAAAAATTACAGAAAGTTCCAAAAATCAAAACTTGAATTTGCCACTTCCTGGCAACTCTTTACATAGTACTTACGTTATATTTACAACTCTTGACATAGTCTTTTATTAGGTATTATAAGTAATCTGGAGGTGATTTCAAATGTGCGTCATTTTATACAAGAGGTTTCTGTATCAGTGGATTTCGGATCTCCACCCTGCAACCCTCCATATAGAGGGATGACTGCAGTGGGTCCAGGAGAACTACAAATTACCATCAAGTAGAAGTCCAGATTACCTAGTGGGATATTTTGAGTATTCTTGTTTTAAACTCATTTTGTGTTCACTGTAAACTTTGGTTTGGACAGAATTTTGAATTGAAAGGATTTACCACTACTGAAAATTCTTACCCAGCTTTTACATCGTTGTGACGGTATCTTCCAGGTATGAATGAAGCAGGACTTTGTGATTGTGATCCTCCATGTATCCCTGTAGTGCCAAAACCAGTGAGATTTTATTTGCTCCTATGGCAGCTCGTAGCGATAAGACAAGTGTTTTTTCCTCATGAATTAAAACACATATTCTCTAAATGCCAGCATGTGGAGATGGGCTTTGCACTGCCCTTTCCAGGAGTGTCTTTGGATTGTCTGGAGCCTAGGCAATTCTGAGAACTACTGCAAGCCAACTACAGGACACTAAAGAAATATACACGCAGACGTGTGTGTGTGCAGTGGATTCTACAACTGTGGGCTTTTCTGGACATCCATAGAAACGCGTTTCCTTCACTTGTAAAGTTTACATTTTGAAGCTCACAGTTACAAAAAATAGGACCCATTAGCTCATGCTTTTCAGGCAGATGTGGATGGGTCTTTTTTTGCAAATGGAGGAGTCCTGTCTTGAGCCCTGGGAATTTCTGCTGTGGGTTGGGCGCGGGCTCATTCCTGGATTCTCCCAATCACGTTCGCATTGGAATGTTGTTAGGTAGCATTGTAAATAAAAGAATAGGTTATATAATAGAGATAACAACACTTGAAATTTTACTTTAAGAAATCTATAGCACTACATATATATTTAGTTATATCACCCAACAGATTTCTTCTGCACAGTGTGGAGATTGTTTTATACCACAGATTATTTTTATAAAGTCTAGTGAGTTTGAGTAAGAATGATTTTGTAATCAGAGTCATGAGCTTTACCTTTCAAGATAAGTGTACACTGGAGTGTGAGTGGTGTGGGGCTGTCCCTGAGCGCTCCTGCGGCTTCTCATTGATACACTGGCAGATTGCAGTCCACCGATGGGTCTTGTTTGGCCCAAAACTCCACTCGCAGACTGTCTGCATGAGGCAGTCTGCCGAGGAGCGGGGCTGGGAGAGGCCAGAAGATCCTGCCGTGTGCTCTATATACGTGCTTCCTCCTGAGGTTTCTTTTGAACAAACGGTTCTGAGGTGAATAATTCCTTTGTAAGTTACTCTCATGGGTGTAGTGGTGTGAAGGGGTTTCGGGGAACAGAAATGGTACCAGGGTGCAGATTAGGGTGGCTTGGGACTCGAGTAAGATTCAGGCAACAAATGGGTAAAACAAGGATTCGGTGATTGGAGAAATCTGCCAAACCGAATGATCTCAGACCAAACTATCCAGTTTTTCAGGAGAGAATTCTCTGTTCGGAAAGGGAGGGGCATGGTGTCTGGACACTGCGATCAGAGTAAATGGAGGGCTGCCCGGCCTGTCTGTCTGCTCTATTAAGGCTGCTGGGAGGCAAGAGGGGCTGGGCCGCTTGAGTCTAGCGAGCAACCCTGGAGCCCGCAGAGGAGGCTCTGAACCGTATGCCAGCAGGGCCTCTGCCCAACGTCTACAAGGTTTTCCTGCTCTTCCTACAAAGGTCAGCATCACTGCCGTGATGTGGAAGGCGGTCTTTACCTGTTAGGTTTTTGGGTGGAGAGTGGATGGTCACTGGGGTGAGCCTTTCTGACGGGGTTGTATAAGATGTCAGGCATGTAGCTGATACTCTGTGTCCACAGTTGCTGAAGGCCTGGCTTCAGCTGCTGGGTTCAAAGGTGCGCTGGTCAGGACGGTGTTTCAGGAGAGTCTCTGATGTGTCTTGTTAAACCTGCTGTGCTTCTCTTCGGTCTGGCCGAGAGTTTTTACGCCACCCCTTTTATACTTGAATGAACTGAGTTTCGCGGATCCAGGAGCACTCTGGGCATCGCCCCTCGGCGCGTGCCTGTTCCCCGTCACAGAACGTTCGTCTGCCCTCCAGCCTCGCGTCTTGGATGTAATTCTGTTGTGCCTTTGTTTTTCTCACCCGCCTCCCCCCAAAAGCAACTGCTGTAAGCTTTTTTCTACTTGTCTTTTCTAGCCAGAAATCCCACCTTTTTCCTTTTTCCCAGCTGTATTTTCTGGATGCAGTTCTGTGCTCCAGGTGTGTTAAGAACCAGTTACCTCAGACCTCATGTTGGAACAGTGTCACCGTCTGGGTCCTCTCGAAACTGCAGGCTTGCGACACGCACACACGCACGCGGGAACCCTGCCGAGTATGGGTACTCGTTTGTTTTAAAGTAAAACTCTTCCCAAGGATTGAAAAAAAAGGGGCTTCAGGCAAGCTCTTCGCGGCCCTGTGGTGGCATGGGTCTTGAGTGTCATCTGAACGGTGCTTCCCGTGCTCCACTCTGAATCCTGCCATTTTCAGTATTCTCGTGTCTGAATAGGCAAGGTGATTCAGTAGGTTGGCCTTGTTCACAAACGAGTTCTGAAAATGAGCTCTTTGTAACACACATCCAGTCGCTAAAGCTCAAGTGTAGAACATTCCCTTAAATGGCAGGATCGAACCCCCCACCGACCCCATCCACCGCAGTGCATTTTGGGAAGATGTCTGTAGCATACATTGCTGTGAAATTAGGCCTTGCGGGTTATGGCTGTTTGTCATTTTGATGTATTTTAAATAAATATATATATATATTTTTAAAGAGCCTTTTTTTTTTTTTTTTTAAACCAGTTCAGAAAGTTTAATTAACCAGCAGTCACCACATCTGAATTTGCGTCTCCAGGGCGTAGATGGCATACCAAGATTAAAGTGGTAACTCAGCCCTTGTGAGGCCCTTGTGAGCGTGGGCTGCCTGCCTGGCCGGGGCTGCTGGTCGTGGGACAGCAGGGTCAGCGTGTCCCCGCTGGGTCCCAACGCAGCCCTCAGAGTGCATGCTCTGCTTTCTGCAGGGGCTTTAGCTGAGGCTTTCTCAGAGTACTGCCACAAGTTAAGTGTCTGTTTCGCCAAATAGTTTTTCCATAAGCGAGAAACGCACTCATAGAAGTCTTACCAGCAGCGGCAGAGGTGAGAGTAGGATGAGGCAACAGCTGGAGTTTGAGTTGGAAGGTGTCCAGGTCATTTTCGAGAGGCCGTCTGAGAACCAGTGACCATGCAGAGATTCTTAGGAGACCTCATCTGAGAGCCTGACGACCTCCTAGGAGAGGAAGACTTGTTAAAATGCCAGTGTCTTTTTTCCTCCCCCCTCCATTTTTTCTTCTAGGATTCTGTAAAAATGCAAAAGTAAATTGGGTGGTACTTGAGAATTGGGGGGGTGAGGGTTACCGCAGATGAGAAACATGCTTTGAGATTTCAGTTCCACACCACAAATCCACATGATGCCATTTTTCAACTGTACAAAAAGAATCTGCTTATGAATTTGACATATTTATGGTAGCATCAAAGGCCAAATTTTCCATGTGTTAACATTTTTCCACATTTGTCCTTGAATCTGAATAACTTCATACAGTACTGTAAATTCAACTTATATTGAGTTTGATGTCAGTTCTTGTGAAAAGAGCTTCTGCTTGCAACAGACACACAGTTAAAGAACACAGCAGGGTGCATTTGCAGGACCAATTTTGGAACCAATAGATGTCACCTCTCATTTGCCATCGTAATATATCAGTTTTACCAGCTCCTTCTAAATGTTTGTATTATTGTAAGGGAAAGACAGAAAACCCTAAGACTTGTCTAATACCTTTGTGGAGAATGTGTGTGTTGGGTTTAGGATGGATAGCAAAGTCTTCTTGAGCTGTGTTATCTAACTTGTATATAAAACTGTAATTAAAAGTTTGGATTCACCTGTTTCTCGCCGTTTACAATGATGAGTAATTTGCAAACTCTGGAAATGTGACTAGGATATGATTTCAGACAGTAGAAGTTGAGGAAGCTCTTCAAGTGCTAAAACTAAAGACTTCTTGTTTTTGGCTCAAATTCAATAAGTACTGTGTACCAGGATATGTGAGATGTAAATGTAATAGGTCACTTTTCACCCTTGTAGCTATACAATAAAAATTTTGTAGAACAGAAATAGATTGTACTACTGAATTAACAAAAGTTATACTAAAGTATCATGTTTAAAATATATATATATACACACACACAGAGTTAAGCTTGTTGCTGTTACCCTGTCTGGATTTGAAAAGTGTGCTGCTTTATATATATATAATATATATATATATAAAATACACACACCTATATATATATATATATTAAATACCCGCACACACCTAAAATGGCCTAAAGCAGACATCCATGTAATTACAGTTGCAAAATGAAGACATTTTGGAAAGAACATTGTATCATAGTTCATTCATTTGCAGTGGATCTTTGTTCCTTTTTACTGTGGTAATTTTAGAAATGAGTGTCAAGTTTGAAATTAGATCTGCTAAGTTGGGGTTTTGCTGCTTAAACTCTGCACTGGGTCCTCAAATAAACCGATGTGAATGTAGTCCCCACCCCCCTACCCCCAACCCCCCGTGTGAAGAAGCAGCCACACCCCAACAGAATAGGAGGAAAAATCTAGAACTATTTCAAGTTT EMBV3_29567 GCCCCCATTCCTTGGTGTTTTCTTTGCTGCAATTGTTTTTACCTTCATGGCTGGTACTCC Gene GeneID:497621|SLCO4C1:XM_002689407:38_cdna Constitutive 0 NULL GeneID:497621 7 GENE SLCO4C1 Oatp4c1 solute carrier organic anion transporter family, member 4C1 EMBV3_17398 GATTTGCTAACGTCCTACCTGAAGTGCCTTCTCCAAAGACATCCCTCTTTGCCCTGTGTG Gene BVT0102_132578 + 0 NULL GK000013.2:49797706-50192893 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048900 1 XLOC_029031 NonCoding TCONS_00048900 XLOC_029031 NonCoding NonCoding - 13:50066468-50067728 - TSS36076 1260 1 TCONS_00048900_1 133 0.195238095238095 1 0 0.00855215789551146 0.00671490111910185 0.00676422777948408 0.00372369112437275 0.00733980518185139 0.00168064788449932 0.00362399605523393 0.00501812589634364 0.00901103077119436 0.000323281486367616 0.00072854255209459 0.00019013555906621 0.00076514038186714 0.00118346732073721 0.0017638934260346 0.0103550218595146 0.0049279731398349 0.0145168593185696 0.00397532231447255 0.00619833871726876 0.00102395807525183 0.00662560237189224 0.00424482870039074 0.00727798800127237 0.00685700167947378 0.00776678137775262 0.00380844524465355 0.000869040008412277 0.000188790363019095 6.20311688886501e-05 XM_003583326.2 PTPN11 PREDICTED: Bos taurus protein tyrosine phosphatase, non-receptor type 11 (PTPN11), mRNA. 0.0 2109 97.15 0.999206349206349 NM_002834.3 PTPN11 Homo sapiens protein tyrosine phosphatase, non-receptor type 11 (PTPN11), transcript variant 1, mRNA. 4e-96 356 68.05 0.823809523809524 0 noncoding 0 0 0 0 -0.939039272838171 0.0171505219901549 -0.309139859394709 0.0224698719876137 TCAATGTGACAATGTAAGAAAAAATAACAGGACGCAAGATCCTTGTTGCAAATACTTAACTGGAATCTCTTTCCTTACAGGTTTGACAAGAAGACAGCAGTCATTTACATTCCTCTTACAAGGTAATTACCTTCAGATCAGACCTGCGTTCTGAAGCACTGAAGGCACTGCTTCAATGCTGAAGTTCAATGGCTAGGCGGGATGGGAGGTGGGGTAGGGGGGAAATCAATGTACTTTTTTTTTCCAATGTACATTTTTGTCTTCTGAAAATGGCAGCCAGGCTCTTCTCAAACAAATCTCCTCAGGATTTTAAAGGAGGTAAAGCCCTCAGGAAGGAACTACTACCAGGGCTGGATCTAGTCCTTCCTTTTCAGGAGACAAAGCAAGAAGAATTTGATGAAGGAGCCCATGACTTAACAGCAAAGTTGCCATGGCATTTTATTATCTTTACCATGTCCACCAATGACGCTTTAATTGAAATACACTCACCGACTGATGATTCAACACACAGGGCAAAGAGGGATGTCTTTGGAGAAGGCACTTCAGGTAGGACGTTAGCAAATCTTACTGCTCAGTTAAAACAAAAATGAGCTACTGCTAATTCAGTCAGATTAGTGACCTCAGGGGAACTGCTCCTCCTCACTCAGCCAGTGGCAAGCATGGGTGTGGGATATGACTAAAACCAGAGGCGTGAAGAAAGCACTCCATACACCTCTCTCTTGTAGGGGCTAGGGCAGCGAGCTGGTTCTGCTTTCAAATGCTCTGCCCTCACAAACACATCCATCCTAAGAGGTCAGGTGCCCAAAGTGATGGTTCAGAAAATATGCTAAGAGCCAGCAGAAGTGGTTCAAGAAGCTTGCTGAAGGCCCTATTTCTGCCTGACTCCCAACTTACACCAGTTATCATAACCAGCTTCAGCTTTCCAAGGTCACTAGCGGCTCCTACTTTTGCTACTTTTTTTTTAGCTGTTTTTCCACGGCACTGGTCCTGACTGTTACGCTGGGGGCCTCCAAGGAACCTTACCTCCAGTTCACGCCCTCATGCAGTCCCCTCTTCCCAAATTGGGCCTGAGCCTGGGCCTGGGCCTGGCTTTAACCAACACGGGGCAGTAGAAATGATGTGGTAACAGTTCTGGGTTGAAGTCTTCAGTGCGCGCGGCCGCTACTACTTTATATCCTTGGGGCCTCAGAGCTGCCATGAATGTGGTCCAGCTACCCTGCTGGCGAATGAGAGACCTGAGGACCACACGCAGACAGAGAA TCONS_00042898 . 5' 312926 TCONS_00042898 . 5' 312926 EMBV3_41731 GTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCATTCTGGGAGACGAAGTCATT Gene GeneID:516921|EML6:XM_002691327:478_cdna Constitutive 0 NULL GeneID:516921 11 GENE EML6 NULL echinoderm microtubule associated protein like 6 EMBV3_08517 CGCCCGGACGTGGGACACCAAAAACGTCATTTCAAGAACACTTCATATTTGGAGATACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37691 ATCGACGGGCATCCAGGGACCGGAGCTCGAAATACAAGTTCTCCCGAGAGCGGACTTCAA Gene GeneID:535131|LUC7L:NM_001080301:17_cdna Constitutive 0 NULL GeneID:535131 25 GENE LUC7L MGC140713 LUC7-like (S. cerevisiae) EMBV3_21948 CCTTAAAGCCTTTTAGGTGGTGATCTTAAATGGGGGAGACGGAAACGAGAGCACATATTA Gene GeneID:538498|ZZZ3:NM_001102215:80_cdna Constitutive 2 NULL GeneID:538498 3 GENE ZZZ3 MGC160076 zinc finger, ZZ-type containing 3 EMBV3_11226 AAACTTGGAAGTGTGATGGACAAACTGGTTAACACTCAGGGGGAGCTGCTGTCCATAGCG Gene GeneID:513016|C9H6orf163:NM_001079772:14_cdna Constitutive 0 NULL GeneID:513016 9 GENE C9H6orf163 C6orf163 chromosome 6 open reading frame 163 ortholog EMBV3_17858 GAACTCTATTAACATTTCAAAAATAGATTATCAAATTTGCTTTCTAATTGGCCAAAAGAA Gene GeneID:507041|PRKCE:NM_001111120:59_cdna Constitutive 2 NULL GeneID:507041 11 GENE PRKCE NULL protein kinase C, epsilon EMBV3_24975 TCTTGGGGAAAACCTCAGAGCTGGTTTATTTGGTGTCGTGGAACCTCTTACTGCTTTCAG Gene GeneID:338058|ARF1:NM_176653:11_cdna Constitutive 0 NULL GeneID:338058 7 GENE ARF1 NULL ADP-ribosylation factor 1 EMBV3_42265 CCCAGCCATTGCCAAACTTGATGGGGTTTTCCAGCCACTGTGCATTTACTCAAGCTGGAT Gene BVT0102_047669 + 1 EMBV3_36187 GK000017.2:55747670-55759605 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075564 TCONS_00075567 TCONS_00075563 TCONS_00075568 1 XLOC_046611 NonCoding TCONS_00075568 XLOC_046611 NonCoding NonCoding - 17:55756939-55758176 - TSS56950 1237 3 TCONS_00075568_6 78 1 0 0 0 0 0 0 0 0 0 0 0.00156663526854845 3.13831248290796e-05 2.89060873064938e-06 0.000120786451400729 2.86837722194971e-27 0 0.00139323697975297 0.0021133324273638 1.88940722462752e-20 0 0 0 0.00250785557311412 0.00043306704444864 0.00101433840118372 0 0 0 0.000629627545842269 0.00160904489688365 0.00250307898218429 XM_005217938.1 RHOF PREDICTED: Bos taurus ras homolog gene family, member F (in filopodia) (RHOF), transcript variant X1, mRNA. 0.0 2232 100.00 0.999191592562652 XR_243002.1 LOC338799 PREDICTED: Homo sapiens uncharacterized LOC338799 (LOC338799), 5e-76 289 76.91 0.350040420371867 0 noncoding 1 1 1 1 -0.00742661922763282 0.956737070432149 0.0305830561464765 0.693176625388803 CCACAAATGTCACCTGCCAACTCCCCTAGGCTTCTGTGTACCAACAGTTCTGTGGCAAGAACCGGGTTAAAGAATTTTTTTCTTCTCCCAAATCTCTCCAGGAATTCCTAGTGAAGAGAAGAATGGATCTGGGTCCTCAGATTGTGTTGCAGGTAAGGGAGTCTGCCGGCCTGTGGGCATTTCCAGTGCCTCAGCTGGCCTGCACTGGCCTACTGCCTCTGAGGAAGCTCTGAGCAGCTGGCCTGGCCACTGGGTATTTTTAGCTACAAAGCCAGCCCCTGCACCACCACTGGAGCGAGGTCCAAATCAAACATGCTCCCTGCAGGGTGGGGTTGGGGCTCCGCCAACCTCTTGGCCAGGCAGGGTGGGTGGGCAGGCTGGGGCCAGTGTCAGCTGTCTTGCCTGGGCCTAGGCCAGGTTGGGAAGACCCACTTTTCCTCCTCTTGGCTCTGTGTTATGTCATTTGTTGTAAGTTGAAATTCATTTCATAGAAAAGGTAGAAACTCAGGTCTGAGGACTTTGAGAAAAGTCAAGTGGACTCCCCCTCCAGGCTGGAGCAGTTACCACAGTTTGCTCAGAGTAGGGTGACCCTTCTAAGTGAATTCTCCCAGTGACCCTCCCAGATGAGGCAGTCTTACTCTCCTAGTCACTCCCTGAGCTTCAGGATCCCTGACACAAGGTCAATCCTGCAGTTGGCTCAAAGGTAAGTGGTCCTCCCCTCTCTCTCAAAACCTTCTTCCATCCTCCCTGTCCCTGAGTGATGCTCTTCCCCTCCTGCCAGCGCCAGGCTGCCCCTATGCAGAGATGGCCCCAGCCACGGCCTCACCAACCAATCACAGCTCCTCCTCAGTCACTGGAGAGAGCTTTGGCTTGGCTCTTCTGTTCAGAGCCTGTGTCTGACTCCTGTCTTCAGCCTGGCAGCCAGGCCTCCATGGTCTAAGCCTTGGTTTCCTTGACAGCCATGTCTCGCCCTTCTCACGCCCCAGCCATTGCCAAACTTGATGGGGTTTTCCAGCCACTGTGCATTTACTCAAGCTGGACGCCCATCCTACTTCCATTGGCCCTTCCTGCCAGCACTGCCAAGCTTAGTTCATGTACTACCCAGGTCTCTCTCAATCCCACAGGGGCTCTGGTGTCTAAATAGTTCACATCTTGCATTTAGACTGCTTCCCCCAAGACTGAGTTCCTCAAAAACAGGAACACAGTTGCCTCTCAATAAACTTGTGCTGCAAAAAAT TCONS_00075567 s 5' 0 TCONS_00075567 s 5' 0 EMBV3_12090 GTGACCTTGCTGGGGAGGAGGGAGTTGAAATGCACATGGACCTCAGATTTTGTTTTCTCC Gene GeneID:618387|DIRAS1:XR_083711:50_cdna Constitutive 0 NULL GeneID:618387 7 PSEUDO DIRAS1 NULL DIRAS family, GTP-binding RAS-like 1 EMBV3_21659 ACCGTGGCCTCCTCTGTCCCATATGGACTCAAGCCTAGCACTTAAAGCTCTTGATAACAG Gene GeneID:506206|MR1:XM_002694213:67_cdna Constitutive 0 NULL GeneID:506206 16 GENE MR1 NULL major histocompatibility complex, class I-related EMBV3_26194 GTACAGGAGAATTCAGAGTAGTTGCTGACATCAGTGGCTGAAGAACATGTAAGGGGAAAG Gene BVV0102_288523 + 0 NULL GK000014.2:77387756-77741553 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24174 CCGGATACTACTTGTGGCAATGGCTGGGTCTGTGAACATCGATGGCGTCAAATAAGGAAC Gene GeneID:505049|AMY2A:NM_001035016:56_cdna Constitutive 0 NULL GeneID:505049 3 GENE AMY2A AMY2B MGC128590 amylase, alpha 2A (pancreatic) EMBV3_19118 TCCTCCACTTACTGGACTAGGGGGAGGTTATAGCCTCCTAAGGAGCTCACTTAAAACATA Gene BVV0102_263011 + 0 NULL GK000030.2:23142884-23233005 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246583 TCONS_00246586 TCONS_00246589 TCONS_00246582 TCONS_00246581 TCONS_00246590 TCONS_00246587 TCONS_00246585 TCONS_00246591 TCONS_00246584 TCONS_00246588 1 XLOC_151031 Coding TCONS_00246582 XLOC_151031 Coding Coding ATP11C X:23229970-23266386 j TSS184833 3880 1 TCONS_00246582_2 207 0.0371134020618557 8 0.893670190855417 0.000118556433309518 0.000525669245374419 6.12926344916585e-05 9.65354726463904e-05 0.000782134442513934 9.00668516875392e-05 0.000149279477389215 6.5392001502884e-05 0.000394058097282559 5.19546910313095e-38 6.02187688820086e-06 1.03418750850895e-58 0.000115835117742827 6.39724928345029e-06 8.29918343915559e-05 7.80421015016973e-83 0.00122649376336464 0.0030569359352654 0.000308519250056282 0.000380235614946455 2.33635795826027e-05 4.9271436710229e-146 1.89222704575897e-53 1.84380226239222e-49 0.000463500787963457 0.000513249658602425 0.000364253093161085 1.39900530903057e-60 3.89783763810184e-56 2.40544060861815e-129 XM_005200585.1 ATP11C PREDICTED: Bos taurus ATPase, class VI, type 11C (ATP11C), 0.0 5761 100.00 0.822938144329897 NM_001010986.2 ATP11C Homo sapiens ATPase, class VI, type 11C (ATP11C), transcript 0.0 3029 80.77 0.822938144329897 TCONS_00246582_2 sp|Q8NB49|AT11C_HUMAN AT11C_HUMAN Probable phospholipid-transporting ATPase IG; 3e-118 365 92.51 0.898550724637681 0 coding 0 0 0 0 -0.0535305975975479 0.801256132031847 -0.0187338755280762 0.739820352630836 AAAAACAGCCTCAAGTCTCCCAGAATGGGAAATTAGCTAAGTGAGAACGTGTGACAGAAGGAAAGAGATGGTTTTTTGACGTGGCTCAAAAATGGACTATTGAAGGGGCTGCCCAAAGAGAAATCCAGAGACACAACCTTTGTTTCATTTTGCCACAGTTTTTGTACCAGTTCTTCTGTGGATTCTCACAGCAGCCACTGTATGATGCTGCTTACCTTACAATGTACAATATCTGCTTCACATCCTTGCCCATCCTGGCCTACAGTCTACTGGAACAGCACATCAATATTGACACATTGACCTCAGATCCCCGATTGTACATGAAAATATCTGGAAACGCCATGCTACAGTTGGGCCCATTCCTATACTGGACATTTCTGGCTGCATTTGAAGGAACCGTGTTTTTCTTTGGGACTTACTTTCTTTTTCAGACTACATCCTTAGATGAAAATGGAAAGGTATATGGAAATTGGACATTTGGAACCATTATTTTTACAATCTTGGTATTCACCGTAACTCTGAAGCTCGCCTTGGATACTCGTTTCTGGACATGGATCAACCACCTTGTGATTTGGGGTTCTTTAGCATTTTATGTATTTTTCTCATTCTTCTGGGGAGGAATTATATGGCCATTCTTGAAACAACAGAGAATGTATTTTGTATTTGCTCAAATGCTGTCATCTGTATCCGTATGGTTGACCATAATTCTTCTAATATTTGTCAGCCTTTCCCCCGAGATGCTCAGGATTGTATTAAGGAGTGTAAGAAGAAGAAGTACCAGGAATCCGAATCTTGAACTGCCTATGTTATTATCCTACAAGCATATTGACAGTGGTTACAGATAAAAGAGAAAGCATGAAGAAACAACTTCAAAAAGTTATCATCTCAGGATACTTGATATGCAACTAACTAAACCACTATCTTATGTCTGAGGTTCAGAATAAATGTCCAGTAAAATACCAAATGACTCTCTTAAGCATTTATAATTATTATAAGTAGCCATTATGGCCAAAGCTCTAAGTTATGAATTATATGAAAGTTGAAAGCAAGAATATATAGAATTTCTGGCTTTAGATAGAATAACTATCAAATGGGTGCTTTTTTAACCCATGAACTCTGTGAATGGATTTAAATATGATAGAATAAAGTAGAAGTCATGCAATGGGAATGAACAGATTTTGCTAAACTTACTTTTTTGCCTGGCAAAAGAAATATGCTGTTTGGATCACATTTCTTGTTCCTACTGAATGATGATCTTAAATTTTTTCCACATATGAAAGGAATACTTGAAAATATAAAAGAACTAAATCAATGCATCAGATAGTAGGTAATCCTTTCTGTTTACCTACATGCTGATTATCCTTGCCAAAAAGTGCATTGAAAGGTGGAATGTTAACCCTGGGTATTTTTGCAAAAATCAAAAAAAATTATTTATTTTTGTTCTTCTGAATTACACTTAATGGGTGGAAGAATACTAGATTTGAAAAGAAATCATTTCCAGTCACTTCAGTGACCCTCAAAATAGTTAAAGATATAACAGATTTTTCCAATATTAGCTTTACTGGGATCAGAGGTAAAATGGGCAAAACTACAGTTACATTAAAATGGCATCTGAACATCAGTCTTTATAATTTTTTTTGTGGAGAAGAAGGAAGAATAGCTTATTTAAAACTGTTAACAGTTTCTGTTTGAAAGTGGTTGCATCTGTGCACATATGCAGCACTTTTTTTTTTTTAACTTGGCAATTTGGGAAGGAGGAAGGGTCCATAACATGACTCTGAACATGAATATTGTCTCTCTTAGCAAATACGGCTAGGGTAATGGTCTAACTCTAAACCACAAGATTCACCTTGGTTAAATCCTCCACTTACTGGACTAGGGGGAGGTTATAGCCTCCTAAGGAGCTCACTTAAAACATAAAAATAAATGTGATATGTCTTTATTAAATGTTAAAATTAAACGTACACTTTTTTTTGGATATAAATGACTACATTTGACTCCTAGATTGAAATGGTCTTTTAAAAGGTATTTTTGTTCCAGTTTCCATTTTTGGTTGTCTTTCTGGCATGCCTGTACTATTATTAGTGTTTATATTGTACCCTGATTTGGAAAAGTATTAGATTCAGTCTATACCAATGTATTTATAAAGTCCATATGACATATTTGATTCTTCCACTTACATTTTGTGTTAATGTTTAGGTATAATTTTTCTTAAATTCTCGAAAGGACATTTCAGTTATCAGAAGCCCTTCCATCATTACTGACCCTTTTTCATTATTTCATTTGTTACCATCTATCAGTATTATTTTTGAGTATTTGTTAGGTGTCATCACGCCTTCCTAAGTGTGCTGTGTTTTAGTAGCCTAGTATTTGAAGTAGTCTGCTGGAAACCAAGTCAGTATATTCTCTACCTATTCCAAAGAGCTAAAAATCAGAGCCAGGAAAGCTTTTGATGTTTTGTTGTTGTTCTTGTGTTTATAATTATTGCTGTATTATTATTGTTGTTTTACATAAGAATTATAGAGACTGTGAATACAAAGAGCCCACCTTAACTAGAGAGCCTTGTTTAATGCAGACCATTGAAGGTTTGACATAATCAAAATATCTAAGGTAGCAGAAATGTAAAATTCCTTGCAACCTGGAAGAAAGATAAGTAAGGGGGATGTAAAGTCTGTCTTATAAGGTACACATTACACTGCAGCTCAAATTCACGATGACAGTGATGTGTGATATGGCCTAGATTCTTGAAAGGGACCTGACTTGACTTTTTTAAAGATAGATATTTTATTAATGAGCTAAAAAAAAGGGTTGGCGTGAGGTTAGCAGAAGTAAGCCATCCAGTATTCCTATCACTACAATCTAACCACCTTATTTTGTGCCAGAGAAACTGATAAAATGTAATAATAGGATCATATACCCATCATTTGAATAATTTTGAACTACAAACTGTCCTTATAGTTTTCATAACTGTTGTCCATTGTTTGAGGATGTTAGTACTAAACTGAAAACATAAATTCCATATCTACCACATTTACACCAGCAACAGTATAAAATGTAAGCCTAAATTTGCAAAATTCATAATAATTTAGTGACAGAATTTTTTAATAACATGCAGTATATATAAATGCAGATTTTATGCAAGTGTTGACAAAATCATTTTTCAGCTTACAAAATTGGACTGCAATATTACATTTTTCACTTCAGCAATTTTTTACATCATTGCTTTCTATAATGAATGTGAATGCCATCTTTTATGAATGCAACTTGCCTTTTTCATTAAAGAAATTTTGTTTGATGTAATCAATAAACTTTGGTATGATATAATTGACATTTTCAGTCTCTTTTTTGTAAAGGTCTGTTTAACATAAAAGTAATATGGAAGAAATTTGGTGATAGGAAATAAGTTTCTAATTTCTGCTTTGCCTGTACAGCTCACAAAAGATTGACCATTTCTGCATACAAACTGGCATTTGAGGGCAGAACTAATTTTGGGACGTTCTGATATTTGGGAGTTCTGAATAAGGCTGGATCTGGTTGCTGTATACAGAAAAGTCCAGCTAAATCAGCAAATATGTATTGCTAGGTTGCTGTGTGCTAGGCAGTATCCACTTGTTGGACGTTGTGCGATATATGGTCCACGTCTGCATACCATTGAAATCATTTCTTTTTTTTAATATTGATTTATTTATTTGGCTGCACTGGGTCTTAGTTGCAGCACATTGGATCTTTAGTTGTGGCATGCAGGATCTGACTCCCTGACCCAGGATGGAACCCAGACCCCTGCATTGGGAGTGTGGAGTCTTAGCACTGGACCACCAGAGAAGTTCCTGAAATCATTTGATTCTTAAGTAGCCAAAGATGCAGGGATTTTACAATAGAG EMBV3_33824 GCCTGGGATCACATTCCTTCTCTGACTGAAGAATACTATTTCAAATTCCCCTTAGTGCTG Gene BVV0102_330144 + 0 NULL GK000001.2:140809671-140906948 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26566 CGTCCAGTTCTGCTTACACTTCCCATGATCTATCTCATCTATCGCCTACCATTTTGCCAG Gene GeneID:788703|LOC788703:XM_002707700:322_cdna Constitutive 0 NULL GeneID:788703 15 GENE LOC788703 NULL similar to olfactory receptor, family 52, subfamily J, member 3 EMBV3_41168 TGGCCAGTAATGGGCCCTGGAGCCTCCTCCATCCCACTCTTATGACTCCATATGTCTAGA Gene GeneID:404089|CLDN2:NM_205781:10_cdna Constitutive 1 NULL GeneID:404089 X GENE CLDN2 NULL claudin 2 EMBV3_04485 TTTAACATCCTCTCAGGGACCAGGGGCTTCCTTCTTTCCAGGGGCCCAAGTACATTTATC Gene BVV0102_166682 + 0 NULL GK000010.2:85513974-85518632 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018212 TCONS_00018217 TCONS_00018218 TCONS_00018216 TCONS_00018210 TCONS_00018213 TCONS_00018209 TCONS_00018221 TCONS_00018219 TCONS_00018214 TCONS_00018215 TCONS_00018211 TCONS_00018220 1 XLOC_009201 Coding TCONS_00018219 XLOC_009201 Coding Coding C10H14orf43 10:85514655-85536667 j TSS12289 6561 1 TCONS_00018219_6 1071 12 0.70246694834401 2.20151315000832e-37 3.14330358456159e-05 2.31365852727657e-05 3.35854661990628e-28 1.01749335368055e-55 3.26058707489411e-18 3.50873781154163e-06 1.15838803706491e-151 4.78903175341505e-70 7.29844676824339e-16 2.75084637492642e-10 5.44475576831018e-41 1.49764167019397e-05 5.58642137135035e-06 4.77140275633629e-06 0.00300033305952567 0.000597090467501513 0.00210391699235068 1.09101056616233e-19 5.30132171506704e-38 1.21046093464311e-149 2.83241989698031e-35 0.00126971173985252 0.00123836715934776 2.2520276011564e-126 4.5125580380233e-18 4.14160412096792e-99 0.000558113148014714 1.63590971292336e-85 2.39597129393627e-16 XM_005193740.1 ELMSAN1 PREDICTED: Bos taurus ELM2 and Myb/SANT-like domain containing 1 (ELMSAN1), transcript variant X4, mRNA. 0.0 1.169e+04 99.98 0.987959152568206 NM_194278.3 ELMSAN1 Homo sapiens ELM2 and Myb/SANT-like domain containing 1 (ELMSAN1), 0.0 3375 88.04 0.400396281054717 TCONS_00018219_6 sp|Q6PJG2|EMSA1_HUMAN EMSA1_HUMAN ELM2 and SANT domain-containing protein 1; 0.0 1595 86.34 0.944911297852474 1 coding ATGAACCTCCAGGCCCAGCCCAAGGCTCAGAACAAGCGGAAGCGTTGCCTCTTTGGGGACCAAGAACCAGCTCCCAAGGAGCAGCCTCAGCCCCTGCAAGCCCCCCAGCAGCCCCCGGCCCCTCCACAGTCCAGAGTGAAAGAGGAGCCTTACTTTGCCCACGAGGGTTCAGCAGGGGCTGCTCCCCACTCCCAGCCGGTGGAACTGCCCTCTTCCAACAGCCTGGCCCTACTCAACTCTGTGGTGTACGGGTCTGAGCGGACCATGCTGTCCCAGCAGGTGGGCTCGGTCAAGTGGCCCAACTCTGTGATGGCTCCAGGGCGGGGCCCGGAGCGGGGAGGGGGTGGGGGTGTCAGCGACAGCGGCTGGCAGCAGCAGCCAGGCCAGCCTCCACCCAACTCGACGTGGAACCGCCACAGCCTGCCCCTCTACAGCGGACCCAAGGGGAGCTCTCATCCTGGCATGGGGGTCGCTACCTACTACAACCACCCGGAGCCTCTGAAGCTAGAGAAGGTGGGGGGGCCGCAACTGGACCGCTACGGAAACGCTGTGCGGCCCATGGTGCCGCCCAAGGTGCAGCTGGAGGTGGGGCGGTCCCAGGCGCCCCTTAACTCTTTCCACATGGCCAAGAAGCCCCCAAACCAGACGCTGCCTCTGGAGTCCTTCCGGCAGGCGTTCGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCCCGCCGCCCCCTAACCCCGTCACGGCCTTCCCGCCCCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGCCCTGCCCCAGATACAGCTCTTGGAGAACTTTTACTCCATGCAGCAGCCACCACCCTCTCAGCAGCCCCAGGACTTTGGCCTGCAGCCGGCCGGGCCACTGGGGCAGTCCCACCTGGCCCACCACAGCATGGCACCCTACCATTTCCCCCCCAACCCTGACATGAACCCGGAACTGCGCAAGGCCCTCCTGCAGGAGTCAGCCCCGCAGCCTGTGCTACCTCAGGCCCAGATCGCCTTCCCCCGCCGTTCCCGCCGCCTCTCTAAGGAGGGCGTCTTGCCTTCCACCGCCCTGGATGGGGCCGGCACCCAGCCCGGGCAGGAGCCCGCCAGCAACCTGTTCCTACATCACTGGGTCCCGCAGCAGCCGCCACCCGGCCCACTGGGGCAGCCCCATCCTGAAGCTCTGGGGTTCACGCTGGAGCTGAGGGAGTCGCAGTTCCTGTCTGACGGGGAGAGACTGGCACCCAATGGTCGGGAGCGGGAGACTCCCGCCATGGGTGGTGAGGAGGGCATGCGGGCGGTGGGCACAGGGGACTGTGGGCAGGTGCTACGGGGTGGGGTGATCCAGAGCACCCGACGGCGGCGCCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGGCCCAGAAGGCAGTGGAGCTGGCCTCGCTGCAGAACACAAAGGATGCCAGTGGCTCTGAGGAGAAGAGAAAAAGTGTGTTGGCTTCAACTACCAAGTGTGGGGTGGAGTTTTCTGAGCCTGCCTTAGCCAAGCGAGCACGAGAGGACAGCGGGATGGTACCCCTCATCATCCCAGTGTCTGTGCCTGTGCGGGCAGTGGACCCAACTGAGGCAGCTCAAGCTGGAGGTGTTGATGAGGATGGAAAGGGTCCCGAGCAGCACCCTGCTGAACACAAGCCGTCAGTCATTGTCACCCGCCGGCGGTCCACCCGTATCCCTGGGACTGATGCCCCAGCTCAGCCTGAGGACATGAACGTTAAGTTGGAGGGGGAGCCTTCAGTGCGGAAACCAAAGCAGCGGCCGAGACCTGAGCCCCTGATCATCCCCACCAAGGCGGGCACTTTCATCGCCCCTCCCGTCTACTCCAACATCACTCCCTACCAGAGCCACCTGCGCTCCCCCGTCCGCCTCGCCGACCACCCGTCCGAGCGGAGCTTTGAGCTGCCCCCCTACACACCACCCCCCATCCTCAGCCCCGTGCGGGAAGGCTCCGGACTCTATTTCAATGCCATCATGTCGACCAGCAGCATCCCAGCCCCTCCTCCCATCACGCCAAAGAGTGCCCATCGCACCCTGCTCCGGTCTAATAGCGCCGAAGTCACCCCGCCTGTGCTCTCTGTGATGGGGGAGGCCACCCCAGTGAGCATCGAGCCACGGATCAATGTGGGCTCCCGGTTCCAAGCGGAAATCCCCTCGATGAGGGACCGTGCCCTGGCTGCTGCAGACCCCCACAAGGCTGACTTGGTGTGGCAGCCATGGGAGGTCCTGGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCTGCCTGCTCCAGCATTTTCCCTGGAGCCGGCACCAACCAGGAGCTGGCCCTGCACTGTCTGCACGAGTCCAGGGGAGACATCCTGGAAACGCTGAATAAGCTGCTACTGAAGAAGCCCCTGCGTCCCCATAACCACCCGCTGGCAACTTATCACTACACAGGCTCCGACCAGTGGAAGATGGCTGAGAGGAAGCTATTCAACAAGGGCATTGCCATCTACAAGAAGGACTTCTTTCTGGTGCAGAAACTGATCCAGACCAAGACCGTGGCCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGACTTCCCAGAAGTTCCCAAGGGTGCCTCCTCCCAGAAGAGAGTCCCCAAATGAAGAGAGGCTAGAGCCCAAGAAGGAAGAAAAAGAGACCAGAAAGGAGGGGGAGGAGGAGATGCCAGAGACCCAGGACAAGGGGGAGCAGGAAGAGGGGCGAGAGCGAAGCCGGCGGGCAGCGGCTGTCAAAGCCACACAGACACTACAGGCCAATGAGTCGGCCAATGACATCCTCATCCTCCGAAGCCACGAGTCCAACGCCCCTGGATCTGCGGGTGGCCAGGCCTCAGAGAAGCCAAGGGAGGGGCCAGGAAAGTCACGAAGGGCACTACCTTTTTCAGAGAAGAAGAAAAAAACAGAGACTTTTAATAAGACCCAGAATCAGGAGAACACTTTCCCTTGTAAAAAATGCGGCAGGGTGTTTTTCAAGGTGAAGAGTCGCAGCGCCCACATGAAGAGCCACGCGGAGCAGGAGAAGAAGGCAGCTGCCCTGAGGCAGAAGGAGAAAGAGGCCGCGGCCGCTGCAGCCACTGCGGCCGCCTCCCCGCACCAGCCGGCCCTGCGGGAGGAGAGCGGTGCGGGCGAGAGAGGCTGAGGCCTGGAGCTCCGGAGCCTGCGGAGGGAGAGATCGCGCGGACTTGTCTCTGCAAAACGAATACAATTCAATAAACGGCCCTTTTTATTTATAAAGGTCCCAGGAGCAGTGTAAAGGGCTGTAGGATCCAGTTCTCTTGCATTTGGTCTGTCGGAAGTTTTCCTCCCCGCTTTCCAGAAACTAGGAAAGTCCCTGCTCGCCCGGGCTACCCCTGGGGAGGGGCCCCAGCGCCACAATCTCAGCACGCAGCCGCTTCCGTCTTTGTTCCCCCTGCTCCCCTCGGTCACCATGGAGAGCAAAGCACAAGTGCGCCCCCTTGGCAGCATTCACCTCCCCCCAGGGGACCTGCGCAGGCCTGCCCGAAGTCCCAGAAAGGGATTCCCTGGGAAGGAGTGTGGTGGCTATCTCCGAGAGGGAGCTCAGCCTGGCTGCTCCGGTAACTGTGTCCTTATAGAGGCCACCTCCTCCCCAGGAGGGAGGCTGCCAGAACGGGGAGGGTGGCAGGGAGAGAGACCAGGACAGGTACCCATTCCTGGTCAGCCTGCCGGGGCAGGAAGGTTTTCTCGGATGTTCGGGAAAGGAGCCAGTGCTCCTTGCATGCTCTCAGCCTGCTGAAGGGAAGGGACTGTGCACAATTTGCAGAGTTGCTCCAGGGCTAGGCCTGAGGGAGCTTCTGACAGGCCTTGGCTTTTCTGGTTTCCCACCATTTTGCCAAATAACCTTTAGGCCCTGGAGGCTGCTAAGGGAGCTTAGCCTAAGCCCAGCCTGCTCCTCCTTGGTGCAAGTTCCCTGCTTGCCTTTGTTCTGCCCTCGGCAGCTGCCACCTTAACCCCACCGTACCTGGTCTAGCTGATATCCACAGCTCAGCCCTCAGTTGTGCATGCTGGAGATTTCTGGATCCTTCCCTGGGAGGGGGAGGCCTCCTAGCCAGATTGGACAGGAGCCTTCATTCCTTGACTTGTGTCATTTGGGAGCTATTTATTTATTCTTAATATTTAATTTTTAACATCCTCTCAGGGACCAGGGGCTTCCTTCTTTCCAGAGGCCCAAGTGCATTTATCCCAAAACAAGGCACCTTCTTGGCACCCCCTCCCCCAACCTCGTATTTCCAAGACCCTTAAAGTCCCTTGCCCCGTTGCTCTGGAAGTTTTGCCAACAGGAATGATAGTAGCACTGAAAGCAGGTGGAAGGTGTCACCAAACCACAGGCTAGCAGGGTGAAGGGAAATCAAATGCAGTTCTTATTGCTACCTCTTCTCCCTGCTGAACATTCAAGTTGCCTGAGGGGATTGGCTGGAAGCCAGAATTCTGGTTTTGTTTCTGGCTTGAATAAGCCATATTTGGCATGGAGTCACTGAAGTGAAAGGGCTAGAAGATTCAGGAGGCCCCTTCACTTGCCAGCCCCATAGGAGGGCTGAATTATTTCTCTGATCTTTCTATTCAACTTTAGTTGTGTAAAAAGAAGTTCCAAGTGAATGCAAGTATATAACAGGTCTACATGTTAGGAAGGAGCCAAAAAGTATTCATTCTGCTATTCTTCTGAGATAGCCTAAAGGCATCATATTGGTAGCTGGGAGTGGGGAGTTTTGTTCTAAACTATGCACTATCAGGTTTTGGGGTTTGTTTTTTTTTTTTTGCATTCATTTCTGTATTAATATGGTTATACAGGAGCCCAGCTCTGGGAGTGACAAAATTCTCCTTCCTCAACTCCTGATGACTAACTAGACCTCTAACTTCCCAGTGAGTTTCTTCCATAGGTTTCTACATGCTCAATAGCCCAAGATTGCAAAAATCTCCTATACCCTCCCAAAACAGGAAGGTAGCAAATTTAGGCTCTTTTCTAAATCACGTGTAATATGAGTGCCTTCGCAGCTTTGCCCCAAAGTGCTACTTACATTTCCCGAGGTTTTTTTCTATTTAAACTGCATTTAGTTTCAGGCCACTTTTTGGACATGTGGTAACAGAAACCTCCTTTGTCTAGAGTGATTTTCCTCTTCTAAGCTCACAGAGACAAGAGCAGGTGAATATAGATGGAGAAAATCAAGATGGTACCTCTCCGTATTAACCCCACCCAACATCGAATTTTAAATTAGGTTTATGTTTCAGAATGAATTTATATCTAGAATGCAGTGTAAAAGGTGAAATGTTTAGCGAACAGATGAAGTTGTGGCACATGACCTGCCATAAAGTAGGTGCAGCCACAGAAGCTGGCATAGGTGTATCCTTTATGGTGCTTTCTCCCTATGAAAATGTTCGGCTTGTATTTTTTTTCTTCTACTCAAAACTCTTTGCTTTAAGAAGTTAAACAATAAACACCTTCAGCTTTATAAGGTTCTCCCCACACCATCTCACATATCCATCTCTCAGCCTCCACCTACACTCAGCTAAGGGCATGAAACTAACCTAGTGCCTGTGTTCTAGACCATCTCTGAGGTCTCTTACCCACCCACGGAGACAGTGCTTCAGCACTGTCCTCCATGCCTTCAGCCGCCCCCCTCACAGCTAAGGTACACACCCATCCTTTCTGCTGCCCACTTCCACCCTGGCACAGAGGTCGTGTGCTGCTTATGTCTAAAGGGATCCCATATATTTAACTGCCTCAGTGACCTAACCTCTTCTCACATGCCAGATGTTAAGATGAAGGAGGAATACAACGCATATTCAAGCCTCAGCTATTTAAATGTTTTTATTGAGGCTCACTTTTCTTGGATGGTATTTATTACCATACTGGCAAACCTAACTTCTTAGGTTTACAGGAAGTATGCATATTTTTATAAAACAATTGTATGTCCTCCCCATATTTTTGCTGTGTTAATATTTGCCTCTAACAATTTGCAGCTGTTTCACCTTTTCCTCATTTGTCTCTCAGTCGAAGGCCTTGGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAAATATTTTAATAGCATATAAATAAGTATATTCCTTTTATTTTGAAAAAAAAAATCAGACACTGCCTTCTGTGTGTTTGCTGCCTGTGGCACCCTTTTTTAAAAAGACTGTTACATATTAAAATAGTGTACATATATATAAATATTACCTCTTTTGCTGTACAGTTGTGATAGACCAGACTGAAGATTTTATTTTTTGTGTGCTTTTTATAAAAAAAAAAAATTAACACACTAAAGAAAATCTTGCTGATGTGATTGTAATGTACCTATGTAACTTATTTACTTTTGAATGTTCTTCTGTATCTTTAAACCTTTTATTAAATAAGGTTTTAAAAATTCATAGTTGAATGCTGTGTCCTTTAGGGGAGATTTTCAACCATCTGGGATTGACGTAAATCGGCCTTGGTTTGCTTGCAAG EMBV3_35980 AAGCTGGAGAAGGGACCTGGCTGGGTGTTTGCTGTGTTTGGGAACTTGTCTCATCTGCTT Gene BVV0101_066026 + 0 NULL GK000014.2:23395444-23511299 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24641 TGTTGTCACCATCCTCAAAATGTGTTCAGCCTGTGGTCGTCACAAAGCCTTCTCCACCTG Gene GeneID:515520|LOC515520:XM_002698313:8_cdna Constitutive 0 NULL GeneID:515520 26 GENE LOC515520 NULL similar to Olfactory receptor 5D18 (Olfactory receptor OR11-143) EMBV3_33249 CGAAACCGCTGCAGATCCTCGCCCCGCAAATGGCCGAAAGCCGTTTTGAACCGGTGAAAT Gene GeneID:100300352|LOC100300352:XM_002683935:2_cdna Constitutive 0 NULL GeneID:100300352 Un GENE LOC100300352 NULL hypothetical protein LOC100300352 EMBV3_16840 AGATCAAGATCCAGGTCTCTTTCACGGCCTAGAAGCAGCCGATCAAAGTCCAGATCTCCA Gene GeneID:507066|SFRS7:NM_001034277:62_cdna Constitutive 1 NULL GeneID:507066 11 GENE SFRS7 MGC127028 splicing factor, arginine/serine-rich 7, 35kDa EMBV3_37669 GGCTGCGGGCAGATAACTGAAGCTCGGGGCCAGCCTTGAAAAGAGTTTATTTTAAAACAC Gene GeneID:538758|C10H15orf41:NM_001015668:79_cdna Constitutive 0 NULL GeneID:538758 10 GENE C10H15orf41 C15orf41 HH114 chromosome 15 open reading frame 41 ortholog EMBV3_32427 AGAGAGACAGTTTCATTTACGTTATCTAGCTTCCTCAAATCCTTTGTTTAATCCAGTAGC Gene GeneID:512868|SMYD4:XM_002695685:225_cdna Constitutive 2 NULL GeneID:512868 19 GENE SMYD4 NULL SET and MYND domain containing 4 EMBV3_17778 AACGCCCAGCCAATCCTAGAAAACAACATTGGGAACCGAATGCTCCAGAATATGGGCTGG Gene BVT0102_129171 + 0 NULL GK000016.2:21077081-21783182 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068779 TCONS_00068782 TCONS_00068780 TCONS_00068781 TCONS_00068783 1 XLOC_041784 Coding TCONS_00068782 XLOC_041784 Coding Coding GPATCH2 16:21612157-21808533 j TSS51436 5316 1 TCONS_00068782_3 492 0.0603837471783296 8 0.972970082749841 0.000148952969505466 0.000264242701332045 7.01686175785658e-05 1.44817618040851e-07 3.11366880814065e-05 1.57833355381902e-31 1.62010675960221e-16 0.000204161269088054 0.000217779901031693 9.79647096742878e-16 2.31532251428262e-05 1.67876739069194e-06 3.26312130278024e-148 2.41105729950657e-09 2.27211006423137e-278 0.00150139315302978 0.000292782036463801 6.83111803454137e-10 0.000106860280463439 0.00029650686947684 2.08496850756278e-34 0.00011654587196575 4.19008778020442e-06 7.58191277277638e-12 0.000199242884611165 4.58632922493833e-07 3.0369612727724e-19 0.000172583926498487 1.40521660499862e-11 3.71750978965632e-05 XM_005216787.1 GPATCH2 PREDICTED: Bos taurus G patch domain containing 2 (GPATCH2), 0.0 6031 98.20 0.654251316779534 XR_247030.1 GPATCH2 PREDICTED: Homo sapiens G patch domain containing 2 (GPATCH2), 0.0 1752 90.33 0.240970654627539 TCONS_00068782_3 sp|Q9NW75|GPTC2_HUMAN GPTC2_HUMAN G patch domain-containing protein 2; 0.0 862 86.77 0.997967479674797 2 coding 1 1 1 1 0.00599751292615008 0.964712426685709 0.0200305670002709 0.69238607535054 CGGAAGCTCAGCTCAAAATGCTGAACTGCTCCTGGGAAGTCGCTGGTGGTGCGGTAGTTGGAGTCTGTTCTCGGGCCTGAGCCTCGAGGCCAGGCTCTTGGGTGTCGTTAATGTTCGGGGCCGCCGGGCGCCAACCGATCGGAGCTCCAGCCGCCGGGAACAGCTGGCATTTCAGTCGAACCATGGAAGAACTGGTTCATGATCTTGTCTCAGCCTTGGAGGAGAGCTCCGAGCAAGCTCGAGGTGGATTTGCTGAAACGGGAGACCATTCTCGAAGTATCTCTTGCCCTCTGAAACGCCAGGCCAGGAAGCGGAGGGGGAGAAAACGGAGGTCGTATAATGTGCATCACCCATGGGAGACCGGTCACTGCTTAAGTGAAGGCTCTGATTCTAGTTTAGAAGAACCAAGCAAGGATTATAGAGAGAACCACAATAATAATAAAAAGGATCACAGTGACTCTGACGACCAAATGTTAGTGGCAAAGCGCAGGCCGTCATCCAACTTGAATAATAATGTTCGAGGGAAAAGACCCCTCTGGCATGAGTCTGATTTTGCCATGGACAGCCTTGGGAACAGGACTCTGCGCAGGAGGCGGAAGGTCAAGCGCATGGCTGTGGACCTCCCACCGGAGAACCCCAACAAGCGGACGATGACCCAGCCCCTGGAAGGCTGCAGAGATCAGGACATGGACAATGACAACAGAGCTTACCAATATCAAGAGTTTTCCAAGAACAAAGTCAAAAAAAGGAAATTGAAAATAGTTAGACAGGGACCAAAAATCCAAGATGAAGGAGTAGTTTTAGAAAGTGAGGAAATAAGCCAGACCAATAAGGACAAAATGGAATATGAAGAGCAAAAAGTCTCAGATGAACTCATGAGTGAAAGTGATTCCAGCAGTCTCAGCAGTACTGATGCTGGTTTGTTTACCAATGATGAAGGAAGACAAGGTGATGATGAGCAGAGCGACTGGTTCTACGAAAAGGAATCAGGGGGAGCTTGTGGCATCACTGGAGTCATTCCATGGTGGGAAAAGGAAGATCCTACTGACCTAGACAAAAATTTACCTGATCCCGTCTTTGAAAGTATCCTACCGGGTTCTTTCCCCCTTATGTCACATCCGGGAAGAAGAGGTTTCCAAGCCAGACTGAGTCGCCTTCATGGAATGCCTTCCAAGAATATTAAAAAATCGGGAGGGACCCCACCTTCAATGGTGACAACTCCTGGCCCAGTCAGTAACAAGAGAATGGTTCACTTTTCTCCAGATTCTCATCACCACGAGCAAACAAGCATGCATTTAGGATCTCTGTGCACAGGAGATATCAAACGGAGAAGAAAAGCCGCACCTTTGCCTGGACCTACAACAGCAGGATTTGTAGGAGAAAACGCCCAGCCAATCCTAGAAAACAACATTGGGAACCGAATGCTCCAGAATATGGGCTGGACCCCTGGGACAGGCCTCGGACGAGATGGCAAGGGGATCGCTGAGCCGATTCCAGCCCTGCAGAGGCCAAAAGGATTAGGACTTGGGTTTCCTCTACCAAAAAGCACCTCTGCAACCACTGCCTCCAATTCAGGAAAATCCGCCTAAAGAGGAAAAGCAGAGGCGCTGTTTAACAAGTTTTATTCGCTCGCTATAGCCCATTGTTCTAAAATGACAGCATAGCTTCTGTGGTTGAAGCTGAAACCTAACATCAAAGCCTCAGACTTGTCCCTCTAGCTTCCTAGCTGCTACAGTTCTGCCAGAGTGATAGAAATGGGATTTCATCACAGTCCATGGTGCTAAAGTAAAAACCTTCACCTTTTAAAATTTTTCAGTGACTCGCATTCTAGGTGTAAAGAACAGCTCGTTTCTCTTATTTATTTTGATCTTGTATTGTCAGTAATTTCTCATGTTTTAGCTTGATTCATTCCTGTGTGCGCTTGATGCCCCAGTGACTGAGCACGCCTACGTGTTTCTAAAATAGGATTGGCCGGAAAGGGTTGTATTTCACCTCATCCCTGTCTGTCCTAACAGAAAACACCTGTCATCACATCAGTGAAGTCCTAAGCACATCTTTTTTTTGAAAGGCTGGCCAATTTCGTATTCCTTGAATTTGACTTTTTTGTTAGGATTCCTCAACAGGGTGACACCCATTCGTCTTCTATCCTTGGATACTGTAGCCTGAAGTTCACAGCTGACAAACAGCAATTAATGTTGCCCTCTGACATGTCAACAAAAATAAACCTCATCATTGTGATCACCACAGTGCCCTCAACATGACTTTACTGCAGATCTTATCAATTTTACCTCATTTAGAACATAAAATAATTACGGAAAGAAAAATGTATTTTTTAAATTCACCATGACTGAGTTGTAAACTCTATTAATAATCTAGACTTCCTTCTACCTCTTTGTTCCCAAAGGTTGATATTTTTTTTAAGATCAACTCAACTGTAGTAAACTGATTTTAACCGTCGGAGTAAGTTAGAATATCGACTCAATTTATTTGAAGATTTTAATGGCTCTCCCAAGAATTCAGATGTCTGGGCAAAGATCCAGCCCATTTACAAGGAGTACAACAAAAAAAAAATGAACGGTACTGTTTGCCCTTTCTAACACCTAAGCAGTTACTTTAAAACGAAGCAAAACAAGTCATTTGTATTATGTGCCTAGTATTGTTACATCTGAATCCTCTGCTTCATAATGTCCAAGATTCTGAATTGCTCTTAGTTTAGATGTTGTTCATTAGTAAGAACTAATAATGATACTCTCTTTTGTAATGACCTTTATTGGTTGAGTGAAGGCCAAGATAACACATGTGAATCAACCCTCTAATGTTTTTTAAGCTTTGTTTTTCTAGGGCAGTTTTAGATTCACAGCAGAATCAAGGGAAAGGTACAGCGATTTCTGAAGTATCCCCTCCCCGCACACATGCATAGCTTCCCCCATTATGTACATCCTCCCCCCAGAGTGGTATATTTGTTACAGCTGTCGAGCTGTAACATTGACACATCAAAATCACCCAAACTCCACAGTTTATATTACAGTCCACTCTTGGTGTGGAACATTCTATGGGCTTGGACTAATGTGTAATGACATGTCTGCACCATTGTAGGATCACACAGAGTAATTTTACTGTGATAAAATTCCTCTTGGCTCCTGTCTAACAGGCTTTTGGGAATTTGACAGTCGCCAAGAGTCTTTCACAGTGGGGAGAGGAGGTTTGTGCGTGTAATAGACCTGTCCCACGTGGTCCTCAAAAGAAAATACTGCTCGTTGGGGAGAGGAAGTTCAGCGTGCTATTTGAAAGGCTTACTGGTTTGCCAACTTACAGGTTCCTTTTAAGAATTATCTTCTTAAAGCAGGGTTATCATGATAAGAGGACAAGTTGGTTAGGGAACCATAGGCTACCAGGTGAGTTGCTTTTCTTATGCCCTTCTTAGCCTACCAGGTGAGCATTCTTATTGAATAAAGTAACTTGTTTGATGCTTTCCTAAATGTCTGTTACTTGAAAATTCGCCATTTTAAAAAAAAATATATTTTTTATTGAATACTCATTCTATCTACATAAGGTGCAAAAAGCTGGGGGAGATTGTCTATATTTCGGTTTGAAACTTCTTTATGGTAGCGTATAGCACTCTAAGGCCTGTTCATAAGTTTGTTTTATTCCCACTGCCTGAAGATCTTTTAAAATCCTAGAATTTTGAAAAGCCAAATTTGGAGCCACAGGTAAAACACTATGAGGTTTTTGTGAGACTGACTGATCCCAAATTCCCATGGACTTGACCATTCTTTTTCACTTCACCATGGTCTATCTCTCACAGTGAGGAAGAGCAGACCTTACATGAGCTGGCACGTGAGACTCCTTAGCTATATGTTGCAGCTTTATAAATATTTTTTCTTGTTCTCCTGGACAGGCATCAATCTGCTGAAGAAACTTTCTAAGATATCACTGAACTCAGGTGTTCTCCAACTCCACCTCCCAAAATAATTCATCTTTATATTTTCCCTTAATAGAAGAAAGGTCTCAATATTGACATCTTGAGCCCTGTCTGTGACTCACAGAAGATTTCAAACATGTCTTATTCTATAGGAGTGTTTACGGAATACATGAATCAATACTCAAAGCAGAGAAGTGGTGACTTCCCAAGCGTTCCCCCTGCTCTCACACAGACTTCCCTTCACCTTTCAGTGAAATTTAAGAATGATCATTGCACACCTGAAGTTCTGCTCGGACCTGCACTTAATCAGAGAACACAATTGAAAAGTGGAATTTTTAATGTACATCAAATATCTTTAAGATAGGAAATTCACTAATTTACGTTTATTGTAAAGTTAATTTTTACCAGTACCTATGCCTATTCATCCAAAAGAATTCATGTTTTAGAATGTATCAATCATATCTCCATAAAAAGTAAGATTTTTCTCTTGTCCTTCATAAAGCCAACACTTCTATAGCATCTAAGCCTCGTATCAGATTAATTGCTTGTACTAAAACTTTTAGAGAATGCATAAGTCTCATCCATACTATCTAAATTATCTATTCCCCAGCAAGTAGCCGAGAGACTGAGTGTGGCTACATTAGCAATTCAACATTTTGGCTTTATATTCTTGTTATACTTGATATTAACCAGATTGTATATTGGTGTCATTTACTTCCTCCCTTCCTTCTTTCTCCCCAAATACAATTTTTAAGGCAATGTTACCCCCCTCAAATTTGTTTGCTTTTATTTTTTAATTATATGGTCTCCTTTAAAAGAAAATCCACTGTTAACTAACATTTACCAGTTAATTGGTATCAGCATTTGAAAACAGACTTTATAACTCATACTGTTGCTATCAAAGAGAAGTTAAGACAGTAGGGTTAAAGATATGCCTAATGTATACATATAGGTATGTTTACACGGCATGACTGTGCAATTTACAGACATGATTGCAAAATAATTGCATTTTATTAATATTTTAGCATTGTGAATTGATAGTCTTGCAGTTAATTGAACTGACAATTGCTTCTCTTCAATATGTTTTCATTTTGAGCAGATATTTCATGAAAGAGAAAAATCACTGCTGACATGCTTTTTAAAACCATTTCCTCCTATACTCTGTTTTTCTTTTTTAAAAAAATGGTATTGTAAAATGAAGTTGTTTAGCAAAGAATATTTTGGATTTTTTTTTCTTTTAGTAGAAAGATATAATAATAGTACAACAAAGAATGAAAGAATAAACATTATGTTTAAGAATGTTATTTATAAGCAGTCATTGTCTTTGTGCTTTAAATGTTTCCCTCTTTAAATAATAAAAAATAAAGTTGAAAGGACTTTTTTTTTTTAATTAC EMBV3_41555 TCAGGACGCTGATGCAGAAGGAGCCTGAATAATACGAGGAGCTTGTGCAGGTGATCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07581 AGCCTTTGACTTAGGGGTCATTTGCTCCAGTGTGCTCTCTCCAAATGTCCAACTCCAGAG Gene BVT0102_326942 + 0 NULL GK000018.2:36455307-36458137 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14820 AGAGGTCAGAAATGGTGAAGGTTATCCACAGAAGGTACAAGGCGCAATTCCCTGAGATCC Gene GeneID:618351|LOC618351:XM_002707874:2_cdna Constitutive 0 NULL GeneID:618351 X GENE LOC618351 NULL similar to Melanoma antigen family B, 4 EMBV3_36837 ACACAGCCTGAACTGAACCAACTGACACAGCGGGGCTTGGCTTCTTCTATGTCAGGATCT Variant GeneID:539246|LOC539246:XM_002686049:262_cdna 54^359 2 EMBV3_12855 GeneID:539246 3 GENE LOC539246 NULL similar to C1orf51 protein EMBV3_26944 ACTGTGCTAAGAACTTGTCCTTCCTCCTGGAATCAAAGTAGGACATGCGTATCCTGCCCC Gene GeneID:512324|SETD3:XM_002696833:644_cdna Constitutive 1 NULL GeneID:512324 21 GENE SETD3 NULL SET domain containing 3 EMBV3_07863 GCTAACAAACCAAGGGACCTCTCAGCTTCAGATTTCACCATTTTTGCAGGCTTCAGGGTC Gene GeneID:539608|KCNA2:NM_001101195:167_cdna Constitutive 0 NULL GeneID:539608 3 GENE KCNA2 NULL potassium voltage-gated channel, shaker-related subfamily, member 2 EMBV3_27087 TTCAGGGCCTACCGCCCCAGTCTCAGGAGAAACAAGGACCAGTGTTATATCAGGAACCAA Gene GeneID:100140959|LOC100140959:XM_002687376:12_cdna Constitutive 0 NULL GeneID:100140959 5 GENE LOC100140959 NULL similar to submaxillary apomucin EMBV3_21372 AAAGAAAAAAGGAGTTGAATACCACCACGGCCCAGGGAAAGTAAGGAGGATGGTAGCGGG Gene BVT0101_047823 + 1 EMBV3_17237 GK000020.2:23565675-23658801 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14685 CCTGGAAGCAGAGGACTGGCATCAGAGACGTGGCATCCTGTGCTGCTCATGCTGAAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27474 TAGTATAGGAACCCCCTCCCTCTTTCGGCTGGTGTAGAATAACCAATAGTGTGTAGTGCG Gene GeneID:100125301|PCDHGC3:NM_001114080:193_cdna Constitutive 0 NULL GeneID:100125301 7 GENE PCDHGC3 MGC143171 MGC151660 protocadherin gamma subfamily C, 3 EMBV3_36367 GCGGCAGCCCCCTGACAGCCAGTCTGTCGTGAATGCAGTCTATTCTACTCCAAGAGATTT Variant GeneID:537366|LOC537366:NM_001076093:9_cdna 425^536 1 EMBV3_17498 GeneID:537366 5 GENE LOC537366 NULL similar to Polycystic kidney disease and receptor for egg jelly related protein precursor (PKD and REJ homolog) EMBV3_08842 CATCAAGAAAAGTTCAGTAGGTGTAGACTTCCCACTGCAGCGACTGAGCCTAGGGGACTT Gene GeneID:534273|USP21:NM_001046376:314_cdna Constitutive 0 NULL GeneID:534273 3 GENE USP21 MGC128708 ubiquitin specific peptidase 21 EMBV3_16083 ACCGGCGTGGTCAACATCCCCGCCGCAGAGGAGCCATCTAGAACAGTTTCAGGCAGATAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41368 CCTTCAAGCCTGTTGTACCCAAGAACTTCCACTCCATGCAGAACTTGTGTCCCCCACAGA Gene GeneID:512397|LOC512397:XM_002692387:302_cdna UTR3_Alt 2 NULL GeneID:512397 13 GENE LOC512397 NULL similar to Uncharacterized protein KIAA0552 EMBV3_06122 CCTATGTTTACTTCTCATTTTCCCAACGTTTAAATTATTTGTCTAGGGACAGTTTTAATT Gene GeneID:613694|KCTD18:NM_001046514:134_cdna Constitutive 2 NULL GeneID:613694 2 GENE KCTD18 MGC137502 potassium channel tetramerisation domain containing 18 EMBV3_24290 AGACAGATTCTTCACCACTGAGCCACCTGGGAAGCCCACTCAGATGTACCAGCGTGCTTA Gene BVT0102_360497 + 0 NULL GK000015.2:34628975-34768897 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32271 TTCTGTGATGCTCCCCCAATTCTGGCCCTCTCATGCTCCAATATTTACTTCAGCGTCATG Gene GeneID:513698|LOC513698:XM_002693711:407_cdna Constitutive 0 NULL GeneID:513698 15 GENE LOC513698 NULL similar to olfactory receptor Olfr987 EMBV3_30915 GGGCAGGATGAAGAAAACCAGACACCAAAGACATCACAGGAAGTCAAACAAGCCCTCCAG Gene GeneID:788717|CXCL17:NM_001083799:466_cdna Constitutive 0 NULL GeneID:788717 18 GENE CXCL17 MGC148968 chemokine (C-X-C motif) ligand 17 EMBV3_05186 TTTGATGGGGGAACCAGGGGGCGCCGCTGTGCCATTGAAGCTGATATGAAGATGAAAAAG Gene GeneID:539896|BRD8:XM_002689197:75_cdna Constitutive 0 NULL GeneID:539896 7 GENE BRD8 MGC127124 bromodomain containing 8 EMBV3_38110 ATGGCCCGGATGGTGGCCACAGTGAAACAGGGTCAGCTGGAGCTACTGCGGAGACTCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31784 CCTCTCGGCTTCATCAAAGTCCTCGAGTGGGACTTTGTAATTACTATTGTTGTGACTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26924 TCTGTTCACTACAGACCCCACCCAGAAAACTCAGCACACACCCTGCTAAACTGCTCAGCT Gene BVV0101_090769 - 0 NULL GK000019.2:63886704-64036866 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05957 TAGAGGATGCACTGACAGATCCAAATCATGCCAACCACTTAGATTCAGCTGGGCCGCGGT Gene GeneID:100336707|LOC100336707:XM_002689017:76_cdna Constitutive 0 NULL GeneID:100336707 7 GENE LOC100336707 NULL nuclear receptor binding SET domain protein 1-like EMBV3_14382 GAGAACACAGCCAGGCAAAGGCCCAAAGAGAAACAAGCTTCTGTGATGTTAAGAGCAGCC Gene BVV0102_184770 + 0 NULL GK000018.2:47422876-47465297 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083586 TCONS_00083584 1 XLOC_051299 NonCoding TCONS_00083586 XLOC_051299 NonCoding NonCoding LOC100848226 18:47455039-47461183 = TSS62775 1339 2 TCONS_00083586_2 53 0.224794622852875 2 0.782353898746541 2.03221729267584e-05 0 0 0 0 0 0 4.41726949889186e-06 0 0 1.70962305958094e-06 2.67041355138357e-06 0 0 6.53712228034375e-07 0 0.000404293312074064 0.00114303593536231 1.07108672511602e-05 0 0 2.21677524743215e-05 0 5.63412421935038e-05 0 0 2.18787937086715e-06 2.39091140111145e-06 3.9880706080062e-05 8.98020756429728e-06 XR_138939.2 LOC100848226 PREDICTED: Bos taurus uncharacterized LOC100848226 (LOC100848226), 0.0 1525 100.00 0.630321135175504 XM_005258615.1 ZNF585A PREDICTED: Homo sapiens zinc finger protein 585A (ZNF585A), 6e-31 140 72.03 0.193427931292009 0 noncoding 0 0 0 0 0.0733762339921639 0.646619959098905 0.0200824679062591 0.667095538482486 TTTGTCTGGGCCAGCTTTGTTTGTTGATGAACAGCGGAAGAGAGAAGCGTTTCTCTTGGGGAGCCTGAGGCCCCGGGAGGAAGAGGAGTCTTTACTAGGGGGGCGGCGCAGCAAGAAAGGGCAACATCTTAGTTCTCTGACCAGGGACTGGGAATTGAGCCTGGGACCACGGCAGTGAAAGTACTGAGTCTTAACCACTGAACCGCCAGGGAACTCCCTAGGATGGGATTAAGTGCTAATAAGAAAAAGTGAAGAGTTAAAATTGGACATATTTAAGGATGAAATATTCACTGGACAACAGGAATAAAAAGACCAAGAAGATCCAAGAATGAATTCATCCCACTCTATGTGAGGCATCCTGAAAGAGGATTTTGCATTGAAGCAGAAAATAATTCTGGGACTTGCCTAGTGGCACAGTGGATAAGAATCCATCTGCCAATGCAGGGGTCACAGGTTCGATCCAACCAACCCTCCTATCCTCTCCTTCCTCCCCACAAATTTAGTTCAATCTGTGTGGAGCACTTAGTCAACCTCAGTGCTATTGATATCATTCATCCATCCATTTAACAAACTTGTACTGAGTCTCTACTTTGTGCTGGTGCCATGCTGGGTGCCTTGGACACAGCAGGAGGAAGACAAAGTCCTGACATCATGAGGGTTATGGTCCAGTGGGGAGGGAAGAATGATAAATCAGAAAAAGAAACACTTAATATTAGGTCAGAGGGTGGTACTTGCAGCACAAATATAGTACAAAATAGGGAGTGACCCCAAGAAGTGTGTTACTTCATACACAGTGGTGTGTGTAAACTCTCCAAACAAGGAGAGGACAGCAAGCTTCATGGAGAATGAGGAAGCAGAGTCTCAGAGAACACAGCCAGGCAAAGGCCCAAAGAGAAACAAGCTTCTGTGATGTTAAGAGCAGCCAGAATGGGCATGTTGATAGATAATAAAAATGGTGACCAGCTACAATTAAAGGGTTTTCCAACCCCATGTCCCCTTTTATTATAACTTTACACTATAAACATTAAATGTAAACTTGTAAAAATACAAATAACCAAAATTGTATGTGAAAGACTGATATGCAAAATAGAAAAACTTACATATTCTAATATATAATCATATAGTACATATTATATATCATATAAAATGTTTTTATTGTAATAGGAATATACAATAATAGATATTGCAGTGTACTATATTATATACAATGTTACAGTATATAATGATATGCAATATAAAATTATAACTAATGTACAAATCTATATATATTTATCATCTAATTTCTAATAATCTTTTATCAAACATAATTTATCATACAGTAAAACATAATACTTCTGAG EMBV3_30720 CCTTGCAGACCCAGCACAGATTGTTGGCTTCTGAGGGCACATGTCTTGAGTTATTGCATC Gene BVV0102_065397 - 0 NULL GK000011.2:3930696-4005240 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026697 1 XLOC_015094 Coding TCONS_00026697 XLOC_015094 NonCoding Coding - 11:3970705-3982408 - TSS19105 3315 3 TCONS_00026697_11 101 0.419909502262444 2 0.716886002392753 0.000379158184575117 0.000113508487593755 0.000347976610071102 0.00028297121983873 7.14885264460826e-05 4.31620312141343e-06 0.000132885708522778 0.00063906132878931 9.75853661465814e-05 0 0 0 3.72184364040394e-05 2.83800585917295e-06 0 0 0 0 9.08533759950855e-05 0.000285614616038463 0.000197802928965258 0 0 0 0.000180633952287961 0.000309485625598166 0.000193260893899471 0 0 0 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 2e-41 176 82.09 0.057315233785822 0 noncoding GGGCTGGTTTGCCAGAGGAATGAACCTTGAGATTCAAGACTGGAGCTTTCAGGACTTCCCTAGGGGTCCAGTGGCTAAGACTCGGCAATTCCAATGCAGGGAACGGGGTGGCACAAGTTCAATCCCTGGTTGGGTGAGGGAACTAACGTGCTGCCTGGGATGCAGCCAAAAAAAAAAAAGATTGGAGCTTTCAACCTCATCCCCACACTGCCAGGGAGAGGAGGGGGTGGAGGTTGCATTCAGTCACCAATAGTCAGTGATTTAATCAAACATGGAATGTCCGTAAAACCCTAACAACAGGTTTTGGAGGCTGTCGGGTTGGGGAACACACCAAGGGAAGGGTGGGGTTCAAGAGAAGGCAGGAGAGATCTGTGTGCCCCCTCCCAGGCCTCCCCTCACCACTCTACATACGCCCTCTCCAGGAATCTCTTCCATCTGGTTGTGAGTTGTATCCTTTATAGGAAACTGGCAAATACACGGAAACTGTTTCCCTGAGATCTGCGGAGTCAGTCTAGCACTCTGATGACCCTGAGGAGGCAGTCGTGGGAACCCCTGATTGATGGCTAGTACGTCGGAAGCGCAGCAGGCCTGTGACTGGTAACTGGAGTCTAATTGGAGGCAGTTTTGAGGAGTTGAGCCCTGAACTTGAGGGCTGTGACTCTAGCTCCAGGGAGATAGTGATGGGATCGAAGTGAATTCTAGGATACCCAGACTGTGTCCAGAAAGTCGGAGCATAGATTGCATGCTGCATGCTCAGTTGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGGACTATAGCCCACCAGGCTCCTCTGTCCACGGGATTCTCCTGGACAGATTCTGGAGTAGGCTACCATTTCCTTCTACGGGGAATCTTCCTAGCCCAGGATCCCCCATCTCCTGTACTGGCAGGTAGATTCTTTACCCTGAGCCACTAGGAAGTCACTATGTCCATAGGCTGAGAATAACACGGATGACACCTTTCTGTGCCTCTCTTCCATCTCTGCATTTAGAGATAGCAACTTGGGAGCTTGAAGCTGGCCGTGATGGGAGTATTGACACCACAGAAATCAGGGACCTTTACACATTAGAGCTTTCAATAGCCCCAGAGAGCCAGTTGTTAGACATCTTCCAGCACACTGTGGAGAAAGAGGGTGATGCTGTCATCTTGGCAGACAGAAAGGAGGAAAGGACAGCACACTCAGGTAGATTTGTGGGCTTCATGGTGAGACAATGAGGCTTTTTTTTCCCTGTCGACTTCCACTTTTCTCTGAAGTCAGCTGCTTGCATGAAGAAGCCGAACAGGACAGAAGCCTAGAGCCATGGATCCAAACCAGCTCAGCTTAGAAACCGAAGTGATGGGAGGTGCAGAGCAGAGCAAGGGGATGCAAGGCCCGCGGGAATGGATAAATAGGAAGAGCTGAGAAGGCAGGGGAGGACGCGTACCACCTGGGCAGGGCGGAAAGCTGGGGAGAGGGATGTGCGCATGGGCGTTCAGAGCGCTGCCTTTTGACAGGGTCTGATGCGCGGGCCCTGCGCTGCAGGCGTGGCGACCGAGATACGCTTGGACCTTGTCCTGCATTCTGGGATTCACGTTGGAGGAACCTGTTTCTTCATCTGTAAAAGGCTATCAGTCAGTTCAACGAGTCAATCGTGTCTGACTCTTTGCGACCACGTGGACTGCAGCACGCCAGGCTTCCCTGTCCATTGCCACTATAAAGTGATATAAGCAATGAAAACACATGTAACGTGCCCAAGTCAGAGAACGTTCTTGAAATGTTTGCTTTCCTCCCACCGAACGCCCCACCTCACTTTCTCCCACCGGAACACCCAGGTCTCCTGATCCCCACGTGCACACATGCTCAGAAACGCTAAAAGAACCACCGTTTCTCCACTTCCATCCAGACTCCTCTTTAGCAGAGGCGGTTTTAAAGTCATGTGTTATTAGAAATCTTATAATGTACAGTTTGTAAACGGCAAGTCAGAAATTGGAAGCTCAGGCCAGGATCCTGAGACTGCCTGTCCGACAGCAGAGGCATCAGAGAATGCACTCATTCATAAGCTCGCCAGAGAGACGAGGTGGAAAAGACACTGACGTACAGACAGGAAGTGCAGACAAGGCTAATTCGTTGCCACTGAAGCTTGCTGAGCGTGGTCTGGCTGTGACGTAAATTATTCATGCATTCCCCACGGCACCCTTGTGTTGAAGGCTGATGTCAGGACAGGACCCCGACTTCCTCTTCTGCCCCCGCCAGAGCTGAGCCGCGGTGTACAGAGTCGACACACCATCCATCCTAAAATCCACTCTGTCCTCCAAGGGGGCCCACAGTGCAAGGCTGGCCAGTGCAACTAGGCTTCCTTGTCCAACTGCCAGAGACAGATGGATTCATTCAGTTGCCAGCCCAATACCCCCTGATAATGGTGATAATGTCTGGAATTGATTTATGGTGCTCCTCTTGCCATGAGAACGCAGTGGAGGCTGGACTGTGTAAGTGGCCTTTTGCTGCAGGTACAGAATCATCCTCTAATTGTTCATCTAATGTTTCAGATGTCCTAGTCAGGAATAACAAATTCATGTGCTATAGGGGCCCAGAAGTCACAGTGGTAAAGAGTAAGATGAGAGACTTGCCTAGTGGTCCAGTGGCTAAGAATCTGCCTGCCAGTGCAAGGGACATGGGTTCAATCCCTGCTCAGGGAAGATTCCACATGTCACAGAGCAGCTAAGCCCATATGCCACAACTACTGAGCCCTCGTTCCTAGAGCCCATTCTCTACAACAAAAGAAGCCACCACAATGAGAAGCCTGTGCATTGCAGTGAAGAGCCAGCACAGCCATAAATAAATAAATTTTATTTTTTAAAAAGGAGTAAGATGATAGGGCGTGTTGGGGAATGTCCGAGAGGAGATTGCCTGTCCCATCCTTCCAGACGGCTCCTTGCAGACCCAGCACAGATTGTTGGCTTCTGAGGGCACATGTCTTGGGTTATTGCATCTTCTGACTTTTCACAAGAAGCTGGATTCCCAGATTTTAATGTGGAAATCTCCTAGTTTTTAAATTTAAGTGCTGAGTGAATACTTCCATTGGTCCAGTTCAACTAGATTGTTTATAATCTCTGATCTTATTTGTTTCCCTGTGTAAAGGTAGCCTTTCACAGGAAGGGACATCACTGTTTCTCCCACATTCTCTTTTGTCCTCTCTTACACCGCATCATTCTTTGCATAACGTGTAGCATTTATATCAGTTATGATCTTCAACCTCAGTCACCAATTTACTGCTCTGGTATCCCAGACTCTGTGCTCCAGGTTCTTTTTCT TCONS_00026693 TCONS_00026694 s 3' 8389 TCONS_00026694 s 5' 0 EMBV3_03909 AGCCATACCTCATCGCTTCAGTTGATCCAGGGGATATTCTGTTTCTGTGGGTGAGAGACC Gene GeneID:407177|hare:XM_002687641:804_cdna Constitutive 0 NULL GeneID:407177 5 GENE hare NULL hyaluronan receptor for endocytosis-like EMBV3_24911 TTCATGCTTAACCAGTACACGAAAGCATTTGTTATCATCATCGAGCCCTTTTTTGACTGT Variant GeneID:528582|CCBL1:NM_001077978:145_cdna 417^566 2 EMBV3_37349 GeneID:528582 11 GENE CCBL1 MGC139706 cysteine conjugate-beta lyase, cytoplasmic EMBV3_24017 CCCTGAAGCACCTTGACTGGCAAAGGACACGTCTTGTCAGAAGTTTACAAGCAAAAGAGG Gene GeneID:529002|TBC1D24:NM_001046296:219_cdna Constitutive 0 NULL GeneID:529002 25 GENE TBC1D24 MGC137396 TBC1 domain family, member 24 EMBV3_43380 GGATATTATGCCTTGAGAAGAGAGGACGATGCCGACAAGGAGACCGTAATGTTCGTGGTC Gene GeneID:531992|SERHL2:XM_002687970:95_cdna Constitutive 1 NULL GeneID:531992 5 GENE SERHL2 NULL serine hydrolase-like 2 EMBV3_39723 CCTCCAAGTTCATCTGCTGACGATTATCTGCCTTTCTCAGCCTCTCTCCTTACCTCCCTT Gene BVT0102_087190 - 1 EMBV3_41163 GK000008.2:9221395-9276110 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32870 ACCACTCTTCAAACAGCAACAATGACAAAATCCAACAGAAAGGAAGAAATAGCTACTGTA Gene GeneID:510378|TMEM161B:XM_002689384:31_cdna Constitutive 1 NULL GeneID:510378 7 GENE TMEM161B NULL transmembrane protein 161B EMBV3_06242 GGGATGGAGCTTCCAGATAGTGATGGGGGTGAGCTGATGTTCTTGATAAAGGCAACCTCT Gene BVV0102_206773 - 1 EMBV3_30505 GK000008.2:71891090-72265566 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33038 TGTGAAGGCATCAGTGCTGTGAATGTCAGAGTGAGCAGCTCCCGGGGTGGAGTTGTATGT Gene GeneID:787600|LOC787600:XM_002687255:103_cdna Constitutive 0 NULL GeneID:787600 5 GENE LOC787600 NULL similar to intermediate filament type II keratin EMBV3_35273 AAGATCCCCTGGAGGAGGGGGAGAGTCGGACACAGCTGAACGCCCTCAGCATAGATATGT Gene BVV0102_200562 + 0 NULL GK000025.2:24619570-24935875 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28499 CACTGCACCTCATACATCTTAAGAACTTTGCTTTCTACTGTTACAAGGCTGTGGGCAACC Gene BVT0102_014047 + 1 EMBV3_16541 GK000011.2:69321397-69592077 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10867 CCTATGAAGACTGCAGGAGATGGGGAAGCAATGGTGAGGGAGGCAGGCCACGGGAATTAA Gene BVT0102_174551 + 0 NULL GK000017.2:71894873-71920659 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078180 TCONS_00078187 TCONS_00078194 TCONS_00078181 TCONS_00078191 TCONS_00078188 TCONS_00078192 TCONS_00078185 TCONS_00078193 TCONS_00078184 TCONS_00078182 TCONS_00078186 TCONS_00078189 TCONS_00078183 TCONS_00078190 1 XLOC_047244 Coding TCONS_00078185 XLOC_047244 Coding Coding MORC2 17:71919915-71962575 j TSS58239 5469 1 TCONS_00078185_8 1024 27 0.872430202301976 0.000122365155917204 1.13891170285625e-06 4.14226541505797e-08 5.35750775726405e-07 4.10254959116128e-13 5.72050871094371e-22 2.85114047798479e-05 1.65564709230848e-05 0.000113456490679617 2.55810972710235e-32 1.73393440403732e-22 6.80087538303895e-09 3.59310820020018e-23 5.49004943483418e-26 0.000124335062652103 5.99808111247343e-06 0.00271776500731313 8.35688340046125e-20 2.79032898235625e-07 0.00144489131008546 1.48113200027622e-06 0.000445537883022629 8.36633851323021e-11 0.000223309537691703 1.50215870106004e-08 1.2730909097521e-28 6.14063383001677e-11 7.59048607671686e-13 3.83676308544588e-05 8.88204116203141e-15 XM_005218139.1 MORC2 PREDICTED: Bos taurus MORC family CW-type zinc finger 2 (MORC2), 0.0 8419 99.18 0.861949168038033 XM_005261392.1 MORC2 PREDICTED: Homo sapiens MORC family CW-type zinc finger 2 (MORC2), 0.0 4109 87.29 0.599195465350155 TCONS_00078185_8 sp|Q9Y6X9|MORC2_HUMAN MORC2_HUMAN MORC family CW-type zinc finger protein 2; 0.0 1827 90.78 0.9990234375 3 coding 1 1 1 1 -0.168401813091088 0.310954188648444 -0.00167801302244724 0.982645717298789 GAGGCGGCCCGGGTTGTGTGCACTAGCGGAGACAAAGAGGTGGCCGTGGCGGGAGCGGCGGAGCAGCCCTAGTCGCCGAATTTTGTAGTGCTGAGTCCCGTCACCATCTCATCTAGCGCGGCGCGAGGGCGGCTGGTCTCGCGGCGGCGGCGGCGGACGCGGAGGTGGCGGCAGCACATGGTTCCAAGAGCGCCCTGCGGTTGTTGGGTTCCAATTCCGTGGGGAGGGACAAAGGCAGCTGTGAGCGCTGGGCAACGCCCGGTCAGGTGGTGCTCTCGCCACTGCCCTCGATCCGGGCCTTGAAAACTGGGACTAATTTGTCTCCGTGAGGAGGAGACCACGGGACCGAGGCCCAGTGAGGGCCTGAGAGGCTGAGGCCGCTGTCTGAGGGAAAGGGGGAGGGGCGCGGTCCGCCCGAGTTGATTGGGTGGGTCAATTCTGTGGCGACTTAGTGGGCCACTGTGAGGTAATTTGACTCACTACCCTGAGGAAATTGGGGCGCACAGCAAGCTAGGTTTGATCTGGCTTTGAAAACGGAAATCGGTCTTCAGCGCTTAGGAAATCTTTCAGTTGGTAGGTGGTGAAGCCGAAACTAACGCCATATGCACTCGAGCAACATCGTGATCGCCAGTCTGAGGCTTATTTAAGGATCCTGGGATCATTGATGGCGAAGACGTGTGTGGCTATCCAGTTTTATGACTGCAGTTGCTAGATTTCCGGATTGTGGTTAAAGAACTGGAGACATCACCGCAATCATGGCTTTCTCGAATTACAGCAGTCTGAATCGAGCTCAGCTAACCTTTGAATATCTACACACAAATTCAACCACTCATGAATTCTTGTTTGGTGCTCTTGCTGAACTAGTTGATAATGCAAGAGATGCTGATGCCACGAGAATTGATATTTATGCAGAAAGGCGAGAGGACCTTCGAGGAGGATTTATGCTTTGTTTTTTGGATGATGGAGCGGGAATGGATCCAAGTGATGCTGCCAGCGTGATCCAGTTCGGGAAGTCGGCCAAGCGAACGCCTGAGTCCACCCAGATCGGGCAGTACGGGAATGGGTTAAAGTCGGGCTCGATGCGCATCGGGAAGGATTTTATCCTCTTCACCAAGAAGGAAGACACCATGACCTGCCTCTTCCTGTCACGCACCTTTCATGAGGAGGAAGGCATTGATGAGGTGATAGTCCCGTTGCCCACTTGGAATGCTCGGACCCGGGAACCTGTCACAGACAACGTGGAGAAGTTTGCCATTGAGACAGAACTCATCTACAAATACTCTCCCTTCCGCAATGAAGAGGAGGTGATGACTCAGTTCATGAAGATTCTTGGGGACAGCGGAACGCTGGTAATCATCTTCAACCTCAAACTCATGGATAACGGAGAGCCAGAGCTGGACATAGTCTCAAATCCACGGGATATCCAGATGGCAGAGACTTCGCTGGAGGGCACGAAGCCAGAGCGCCGCTCCTTCCGTGCCTACGCTGCCGTGCTCTACATTGATCCCCGGATGCGGATCTTCATCCATGGGCACAAGGTGCAGACCAAGCGGCTCTCCTGCTGCCTGTACAAGCCCAGGATGTACAAGTACACATCAAGCCGGTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCTGAGCACGTGGCGAGGATTGCTGAAGAGAAGGCACGGGAGGCAGAGAGCAAAGCTCGGACGTTGGAAGTGCGCCTGGGCGGAGACCTCACGCGGGACTCCAGGGTGATGTTGCGGCAGGTCCAGAACACAGCCATTACTCTGCGCAGGGAAGCCGACGTCAAGAAGCGGATCAAGGAGGCCAAGCAGCGAGCACTTAAAGAACCTAAGGAACTGAACTTTGTTTTTGGGGTCAACATTGAACACCGGGACCTGGATGGAATGTTCATCTACAACTGTAGCCGCCTGATCAAGATGGCGTGCGGCGGGGTTGTCGGGGTCGTTGATGTGCCCTACCTGGTCCTGGAGCCCACACACAACAAGCAGGACTTTGCGGACGCCAAGGAGTACCGGCACCTCCTGCGGGCCATGGGGGAGCACCTGGCGCAGTACTGGAAGGACATCGCCATCGCCCAGCGGGGAATCATCAAGTTCTGGGATGAGTTTGGCTACCTCTCTGCCAACTGGAACCAGCCCCCGTCCAGTGACCTGCGCTACAAGCGGCGGCGATCCATGGAGATCCCAACCACCATCCAGTGTGATCTGTGTCTGAAGTGGCGGACACTCCCCTTTCAGCTGAATTCTGTGGAGAGAGATTACCCTGACACTTGGGTTTGCTCCATGAACCCTGATCCTGAGCAGGACCGGTGTGAGGCTTCAGAACAGAAGCAGAAGTTTCCCTTGGGAACATTGAAAAAGGACCTGAAGACACAGGAAGAGAAGCAGAAGCAATTGACAGAAAAAATTCGCCAGCAGCAGGAGAAGCTGGAGGCCCTGCAAAAAACCACACCCATTCGCTCCCAGGCTGACCTGAAGAAACTGCCCTTGGAAGTGACCACCAGACCTTCCTCTGAGGAACCTGCACGTAGACCTCAGCGTCCTCGGTCGCCTCCTTTACCTGCTGTGATCAAGAATGCCCCGAGCAGACCCCCTTCTCTGCAAGCACCCAGGCCAGCCAACCAGCCCAGAAAGGCTCCTGTCATCAGTAGTGCCCCAAAGCCTGCTGCCCCAGCTGCCCGGGAGGAGGCCAGCACTTCCCGGCTACTCCAGCCTCCCGAGGCACCCCGGAAGCCTGCCAACACTCTGGTCAGGCCTGCGTCCCGGCCCACCCCCCCGGTACAGCCACCGTTACCATCTCCCCAGCCCAACTCCAGGAGCCCTCGGGAGGTCCCTTCCTCCCGAGCTCTGAAGACTCCAGTGGTCAAGAAGCCAGAGCTGCCCACTAAACTCTCCCCGCAGGCCACTCCCAGTCGGAAGCGGAGCCTCGGGGTCTCTGATGAGGAAGAAGCAGAGGAAGAGGCTGAGAAGAGGAAGGAGAGGTCCAAGCGGGGCAAGTTGGTTGTGAAGGAGGAAAAGAAGGACTTGAATGAGCTCTCAGACAGCTCTGGGGAAGAGGACTCGGCTGACCTCAAGAGGGCTCAGAAAGATAAAGGGCTGCACGTGGAGGTGCGTGTGAATAGGGAGTGGTACACAGGCCGTGTCACAGCTGTGGAGGTGGGCAAGAATGCGATGCGGTGGAAGGTGAAATTTGACTATGTGCCCACGGACACAACACCAAGAGACCGCTGGGTGGAGAAAGGCAGCGACGATGTGCGGTTGATGAAGCCTCCGTCCCCAGAGTATGAGAGCCCAGACACGCGCCAGGGCAGGGAAGAGGTGGCGGTGGCGGCGGCCCCGGCGGGGGATTTGGTGGCCCAGCAAGCTATAGCCACGGTGGAGCCCTCCACCTCGGACTGCATCCCCATCGAGCCTGACACCACCGCCCCCAGCACCAACCACGAGACCATTGACCTCCTCGTCCAGATTCTTCGGAATTGTTTACGGTACTTCCTGCCTCCAAGTTTCCCCATCTCTAAGAAGGAGCTGAGTGCTATGAATTCAGATGAGCTGATCTCGTTTCCTCTGAAAGAGTACTTCAAGCAGTATGAAGTCGGGCTCCAGAACCTGTGCCATTCCTACCAGAGCCGTGCCGACTCACGGGCCAAGGCTTCTGAGGAGAGCCTGCGCACATCCGAGAGAAAGCTGCGTGAGACCGAGGAGAAGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGACTTAGACATTAACACAGACGACGAGCTGGATGCCTACATCGAGGACCTGATCACCAAGGGGGACTAGGGCCCGGAGCCAGAGATCAGCTCCCCTGCCCCTCAAGGCAGAGCTCCTGAGGGTGGCGTTTCATTTATGGGTTGATGGACTCACCTTGGTTTGACTCACGGGATATCTGTGCTTTTGGTGGGAGAGAGACTGACTCTTTGACTCTTCCACCCTAAGTTGATAAATATTTATTTTTTGAAAGAAACAACATGCTGTGCCTGCTGTGAGACCATACATTTTTTTGGTGACTCTTGGGCAAAGGACAGAACCAGGATGCCAAGTCTTGAGTTGCTTCTCTCGGCTCCTGGCTCCTCAAGATGTGGTGAATTCCAGCGCCGTTTGGAAGTTGGAGGGGCTCCAGGGGCAGGGCTGGGGGAGGGACAGGACCCTTCCCAGGCTGGTGCTCCCCCAGGAGCTTCAATCCAGGGGATCTCCATGGGGCTACCATCAGCAGGAGGCTTAGCGCTGAGGAGCTCCCTGCCTCAGGTCAGGGAGGTGAGTGGTGGTCCGAGTGGTCGGTCTTCTCGGCTGTGGCACTGTGCAGTCAGCTCGGGGAAGAAAGATCTTCCTGTTCAGCTTCCCCATCCACCACCTAAATTCTCCCTGCTGGATATTTCCTTAGCTAGCGGTAGATGGTGAGGTTTCCTGCCACAAAAACTTGAGTCCAGGTTAAGGCGTGGACAGATCTGACTGGTCAGACTGCTGACCTGGGTAGCACATCATTTGCGTTCCAAAGGAGTCCCCTTAGGAATCCTGTGTGTGAAGGAGCGCTGTGCTGGTCTGGTGGTGGCCTCATCTGCCACTGTGGCAGGGTCCTGGGGAGGGCTGCTGCTCTTATTGCTTCCCCTCTGTTCACCCCACCACGCCCTGTCAGGGTCTCTGGTTTGGGGCAGATGGGAGGAGGGGGTCACTGAGCCCCTGAGCACGCCATGCCTCCCTCTGCCTAGTCACAGCCTCATACTGCTGTGGTCCTCAAACAACTCAGGGTCAAAGACCAAGGCCAGAGTCGCTGAGTTTTCTATAATGGCCATTGGAAAAGTTCTGGTTCGATTTCCCCCAACTCACTCCTTACCCCCCTGTATTTGGGGACTTCGGGTTTTCTGAAGGCACAAGAACCATGATCTTGCCCCACTGGTCTGCAATTCTGACCTCTCGGTGTTTCCAGCATCTGCCCACCTCTGCTCAGCAGTGGCCACGTGCCGCCCTATGAAGACTGCAGGAGATGGGGAAGCAATGGTGAGGGAGGCAGGCCACGGGAATTAAGGTCTTTGCCCACTTGTGCATGTGGCCAGAAGTGCCTATGATTTGTGGGCTTGGGACTTCTCAAAACCACACCCCTGGGCAAGGGCTGTTCCGGAGAAATACCAGGGAGGCCCTGACCTCTTCCTCGGAAGATTTTCCAAGAGTCTTGGGGTTTCTTGAGCTGGTGGTTCCTATCCTGTCCAGCTCGTTTTCTTCATCACAGGCAGCATATGATCCATTTTTGTCCTCAAACTTTGTTTTAATCTAGATAGAAGCTGATTCTGCATTTTTACCAGGGGGTAATACTCAAGGTTTTTATTTACACACCTGTAATCAAAATGCAATACTATAAACTTTTACTGGTGAGACTCCTGAACTCAGTCTGTTTTCTTCTAGTAAAACCCAGCACCTTCCTCCT EMBV3_05482 AGTTAGTGGAAAAGAATTCACACTGCCTGGAGAGCTTGCCCACCCCAACCATGCCCAAGA Gene GeneID:512868|SMYD4:XM_002695685:225_cdna UTR3_Alt 2 NULL GeneID:512868 19 GENE SMYD4 NULL SET and MYND domain containing 4 EMBV3_42862 TGGTGAGGTGGCTGCCAGAGAATGTTGTTGCTAACCCACCAGTTTCTTGTCCTTTTGGGG Gene GeneID:540092|C22H3ORF10:NM_001114510:193_cdna Constitutive 0 NULL GeneID:540092 22 GENE C22H3ORF10 MGC127266 chromosome 3 open reading frame 10 ortholog EMBV3_39297 GTTTCTCACTCTCATATTTCACCAGTAAAGGCAAATCCTCCTCCAGTACTAGTCAACACA Variant GeneID:785291|DLG1:XM_002684855:228_cdna 679^777 1 EMBV3_29438 GeneID:785291 1 GENE DLG1 NULL discs, large homolog 1 (Drosophila) EMBV3_00324 TCAGCTCAAAGTCTAGAGTGGACAAGCTGGAGGACTTGCACACAAGGACTGAAGATCAGG Gene BVV0102_099540 + 0 NULL GK000004.2:30125210-30321663 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40557 TCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCCGCCCTGACTCAAAGGGCACGG Gene BVT0102_363889 + 1 EMBV3_37628 GK000002.2:2740386-3114658 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071418 TCONS_00115686 TCONS_00251707 TCONS_00039226 TCONS_00129783 TCONS_00233372 TCONS_00064812 TCONS_00079609 TCONS_00116100 TCONS_00071186 TCONS_00250720 TCONS_00080603 TCONS_00078719 TCONS_00020157 TCONS_00063486 TCONS_00129573 TCONS_00063080 TCONS_00200574 TCONS_00209711 TCONS_00175855 TCONS_00218945 TCONS_00252107 TCONS_00021595 TCONS_00008224 TCONS_00135686 TCONS_00115865 TCONS_00056146 TCONS_00208745 TCONS_00161097 TCONS_00089437 TCONS_00161835 TCONS_00208264 TCONS_00165934 TCONS_00010053 TCONS_00107179 TCONS_00170823 TCONS_00116665 TCONS_00238307 TCONS_00090421 TCONS_00131137 TCONS_00039951 TCONS_00122313 TCONS_00238933 TCONS_00251907 TCONS_00063181 TCONS_00199037 TCONS_00111497 TCONS_00122282 TCONS_00209636 TCONS_00079498 TCONS_00031910 51 XLOC_043189 XLOC_069855 XLOC_154648 XLOC_023044 XLOC_078496 XLOC_142854 XLOC_039536 XLOC_048494 XLOC_070269 XLOC_042958 XLOC_153663 XLOC_049487 XLOC_047607 XLOC_010835 XLOC_038213 XLOC_078286 XLOC_037807 XLOC_122226 XLOC_128222 XLOC_105634 XLOC_132264 XLOC_155048 XLOC_012268 XLOC_003782 XLOC_081909 XLOC_070034 XLOC_033949 XLOC_127257 XLOC_097989 XLOC_054222 XLOC_098720 XLOC_126777 XLOC_100774 XLOC_005605 XLOC_063090 XLOC_103665 XLOC_070831 XLOC_144974 XLOC_055202 XLOC_079842 XLOC_023768 XLOC_073868 XLOC_145599 XLOC_154848 XLOC_037908 XLOC_120690 XLOC_067397 XLOC_073837 XLOC_128147 XLOC_048383 XLOC_018155 NonCoding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_31136 TTCAGGTCTCTGCCTGGCTGTTCTTTCCCATATCTTCTGTGCCCGGTATTCCATGTTTGC Gene GeneID:537034|GPR98:XM_002689382:26_cdna Constitutive 0 NULL GeneID:537034 7 GENE GPR98 NULL G protein-coupled receptor 98 EMBV3_24364 ACAGGAGAAGACATCCCTCTGGAATATCCGGAAACTGTCCTGGAAGAACTGGCCATACGT Gene GeneID:618059|ATP8B3:NM_001076491:103_cdna Constitutive 0 NULL GeneID:618059 7 GENE ATP8B3 MGC151886 ATPase, class I, type 8B, member 3 EMBV3_17304 TGTTGCTGCGGCCCCTTTTGGGGGTGTCCTGAGTCATGTTCTTTTCCAGGGGTTACTTGA Gene GeneID:519630|C2CD4C:XM_002689135:107_cdna Constitutive 0 NULL GeneID:519630 7 GENE C2CD4C NULL C2 calcium-dependent domain containing 4C EMBV3_13482 AATGAATTACAGAAACGGAGGAGTCTGGCACACCCGGAGGCAGAGCAGGACAGGTTTGAA Gene GeneID:520757|RNF10:NM_001076869:198_cdna UTR3_Alt 2 NULL GeneID:520757 17 GENE RNF10 MGC139926 ring finger protein 10 EMBV3_37881 AGGGCAAGGTTTTCATTGGCCTCAACCTCACTCTCTGTGTCTGTGTCTCCATCGTTGCCA Gene GeneID:100336923|LOC100336923:XM_002685662:423_cdna Constitutive 0 NULL GeneID:100336923 2 GENE LOC100336923 NULL SERINC2 protein-like EMBV3_06590 AGGTAGCTGAACGTGGTACCCACCATGATTTGCTTGCTAACCCTAGCAGTATCTATTCAG Gene GeneID:533669|ABCB7:XM_002699989:83_cdna Constitutive 0 NULL GeneID:533669 X GENE ABCB7 NULL ATP-binding cassette, sub-family B (MDR/TAP), member 7 EMBV3_09738 TCTGAAGAACGCAGCCCTCCTCGGTCCAGGGAGAAGGAAACAATCGCCAAGTGCATTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25490 TCCTGGAGACACAATACCAAGACCTGAGAGGACGCCCCATATTCTGGATGGAGAAAGACA Gene GeneID:100138572|LOC100138572:XR_084550:464_cdna Constitutive 0 NULL GeneID:100138572 22 PSEUDO LOC100138572 NULL similar to N-acetyltransferase 6 EMBV3_16065 TGCAGACCAGCTTCACATTCAGCCTTCCATTCTGCAGCTCCAACCACATTGACCACTTCC Gene GeneID:613418|LOC613418:XM_002686600:81_cdna Constitutive 0 NULL GeneID:613418 3 GENE LOC613418 NULL similar to olfactory receptor MOR208-1 EMBV3_21314 TTCTTCTGAGAGGCCTGGGAAGGAGAAAAGGGAAGACAGGAGCCTGATGGCCACCCATGT Gene BVT0102_259015 + 0 NULL GK000030.2:13501006-13559122 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01090 TCTCATTTTTGTCTACATGGCAGCCTACGAGACGGCTTTGCGGATCAGTAGACATGGAGG Gene GeneID:615833|IFITM2:NM_001078054:6_cdna Constitutive 0 NULL GeneID:615833 11 GENE IFITM2 NULL interferon induced transmembrane protein 2 (1-8D) EMBV3_29157 CATGTTTTCCCCGATATAAAGATCCCAGCCAGACCCTGTCAAAGCCAAGGGTGTATTGTC Gene BVT0102_041028 + 0 NULL GK000014.2:7582741-8080291 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054600 1 XLOC_032409 NonCoding TCONS_00054600 XLOC_032409 NonCoding NonCoding - 14:8069841-8070504 - TSS40277 663 2 TCONS_00054600_2 47 1 0 0 0 0 0 0 0 7.03675707882969e-05 0 0 1.24117726299195e-05 3.45276821478379e-06 0 0 0 0 0.000478037988279386 0 0 0 0 0 0 0 0 0 0 0 0.000217312012772258 0 0 0 noncoding 0 0 0 0 -0.0784204445825076 0.584831171993332 0.0349047899874154 0.50185284168471 TTTCAAGTCGTGATAAGAACCGTGAAGAGCAGCGGGGCAGATGCAGTGACGTGGGCCGGTGGGGGCAGCCCCGTCAAAGTGGGCAGGCCAGGAAGACCTCTCTGCAGAGATGACGTTGGAGTCAAGACCCCGTCTGAGGAGGGTGTGAAGGAACCAGGCATGTGAAGGGCCATGTAACAACTGGTGTGGCAGAGATTGCAGAGCCTCTGCAGTGGGAAGGATTGGCAGATGGGAGGAAGAGAGAGGAGCCCCGAGAGCTGGTGCAGAGGAGCGGGGGAGTCAGAGAGGGGACGTGCGTTCCACACCAAGCACAGGGGGGAGGCCTTGGACGGGTTCTAGGAAGGGAAGTGACCTGATCAGGGGGCATCGTTGCCCTGGGCCTGTGGGGACATGAGCCCAGCCCTGAGGCACCAGCTTGCTGCACATTTCAGTGTGACTTGGATTTCCAGTTGCCTCAGAAACATTAAACTACATGTTTTCCCCGATATAAAGATCCCAGCCAGACCCTGTCAAAGCCAAGGGTGTATTGTCTAAAGCAAATTCTGTTTTATATCTTCCCAGTTTTACTTAGATTTATTATATACTTCCGTGTATTTTCAAAAATAGTGTTTTGGGGATTTTTTTGCCCTTTCAAGCTCATGTGGCAATTGACTGGCATCGCAG TCONS_00051251 . 5' 9788 TCONS_00051251 . 5' 9788 EMBV3_40130 AGACACGGAGGGCCTGAGGGAAATCTTCCGTGCCTCCGCCCGACTCTGGTTCCACTGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41203 GACAGTGGCCCATAAGTCAAGCTCCCAAGGGCAAGATCGCCTCTTTATTAGACTGCGTCA Gene GeneID:378475|IL21:NM_198832:11_cdna Constitutive 0 NULL GeneID:378475 17 GENE IL21 NULL interleukin 21 EMBV3_16582 TTTGTTTCCACTGCAACCGTGTTATAGAAGGCGATGTGGTTTCCGCCCTCAACAAGGCCT Gene GeneID:540281|MGC142792:NM_001083495:161_cdna UTR3_Alt 1 NULL GeneID:540281 11 GENE MGC142792 NULL similar to Lims E protein EMBV3_10313 GCATCAGTGAAATGTCAAGAATATGCCCCGAAGGCACCAATGCAATACTGGAGTTTCAAG Gene BVV0102_024105 + 0 NULL GK000002.2:98666532-98758035 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21019 CGGAACCTTGGATTACAAAACCCCGAGCCATTTTCAGTAGCGGTGCTGTATTGTACAGAG Gene GeneID:526535|SQLE:NM_001098061:47_cdna Constitutive 0 NULL GeneID:526535 14 GENE SQLE NULL squalene epoxidase EMBV3_38441 CTGGTAGGGATGCCTCCAGAGGACTGGCAACATTTTGCCTAGATAAAGATGCACTTAAAG Gene GeneID:534021|PGRMC2:NM_001099060:38_cdna UTR3_Alt 2 NULL GeneID:534021 17 GENE PGRMC2 MGC139610 progesterone receptor membrane component 2 EMBV3_15013 GATCAGACTGTCTACCTCCCTGGAGCAGCAAGGGCCCTGCCCACCTCCTGGCTCATCCTT Gene GeneID:512024|MGC139698:NM_001080263:73_cdna Constitutive 1 NULL GeneID:512024 11 GENE MGC139698 NULL hypothetical LOC512024 EMBV3_14079 CTGTAAAGAACTGTATTGAAGATCAAAGAACACTGCGTGTGTAGGCCTTGGCATAGGGCC Gene BVV0102_085765 - 1 EMBV3_19168 GK000022.2:13681232-13842702 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130036 1 XLOC_078747 NonCoding TCONS_00130036 XLOC_078747 NonCoding NonCoding - 22:13812556-13812819 - TSS96903 263 1 0 0 0 0 0 0 0 0 0.00303607621899561 0 0 0 1.35957495770841e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.081030312601331 0.547290182726506 -0.0272853112646852 0.689121334957847 CAGAGGGGACAGAAACACTCCACTTGTTGACCATCTACAGCGGGCCAGGCCCTATGCCAAGGCCTACACACGCAGTGTTCTTTGATCTTCAATACAGTTCTTTACAGATTAAGAGACCGAAGCTTTAAAGAGAGGGTGGAGAGGACTGAGTTCTGAAGTGTCCGCCGTGAGGCCCCCAGCACCGCTTTGCTTCCTTGCATTCATTAAACATTAGCACAGGGCTCCCAAGCATGCCTTCTGTAGCACGTGGTCCGAGGCACTTC TCONS_00126155 . 5' 29765 TCONS_00126155 . 5' 29765 EMBV3_35689 CTAGCAAAAAAGAACTTAATACTGTTTTCAAGGCCAGGGGAGTTGACTATGTTAAAGACC Gene GeneID:533675|LYPD1:NM_001046359:14_cdna Constitutive 1 NULL GeneID:533675 2 GENE LYPD1 MGC137590 LY6/PLAUR domain containing 1 EMBV3_22277 CAGTTGCTACTACAAGTTGGGGCTGAATGTAACAGATTATGACTTTGGGGACTCTGTCCT Gene GeneID:539966|ZBTB24:XM_002690116:129_cdna UTR3_Alt 2 NULL GeneID:539966 9 GENE ZBTB24 NULL zinc finger and BTB domain containing 24 EMBV3_34406 CTGCTCAGCTGTAGTTATTAGTGACTGCCTACCTCCCTGCCTCCAGCAACATCAGTGTCT Gene BVV0102_318100 + 1 EMBV3_33499 GK000001.2:16871078-18058708 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26894 CACACAAAAATGCGTCACACAGGATACAGAGCGAGAGAGAGAGTGAAATGGGGGGAGACT Gene GeneID:100336456|LOC100336456:XM_002684785:16_cdna Constitutive 0 NULL GeneID:100336456 1 GENE LOC100336456 NULL limbic system-associated membrane protein-like EMBV3_25552 CTGAATTCTTCACTTTGTTTAAGGGACTCTGCCGACTTCTCACCGGGGCCAGACTCCAGA Gene GeneID:516934|RPUSD4:NM_001015616:20_cdna Constitutive 0 NULL GeneID:516934 29 GENE RPUSD4 FLJ14494 RNA pseudouridylate synthase domain containing 4 EMBV3_39605 CAGTGCGGTCCCAGCAGATGACAACAGGTGAAGATTAAGAACAGGAGAAATATCGGGGAC Gene BVT0102_016391 + 0 NULL GK000002.2:40017030-41114110 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108861 1 XLOC_064766 NonCoding TCONS_00108861 XLOC_064766 NonCoding NonCoding - 2:40026255-40027124 - TSS80482 869 1 TCONS_00108861_1 34 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000184902071612275 0 7.33955661591778e-05 0 0 0 0 0 0 0 2.11140327048911e-05 0 0 0 0 0 0 0 0 noncoding GGAATGTAAAGGATTCTTAGTAGGGAATTACCAACTGAACTGAGCAATTTAGGTGGCCTTTAGGTAAGTATACTTTAAAAAAAAAATCTACATACTTAAATATAGAGAGAATCAAAGATTTGGACAACATTCTCTGAATAAGATATAGGTTTGATACTCATGGTCATCTTTCTCTTGTATCTTCTATGTTAGTTCTGCAGGTAGAGCTGAGTAAATGAGTTCAAAAGACTTAGCTAATCTTTGGCGAGGCATTTTTCAAATTTATGAATACCATGTTAAGAAAAGATTTGAATTTTTTTTTTTTTGAGTGTTGGAAAAGGCAACAACTTTGAAAAGCTTTTGCTACCACTTTTCACCTTGTGTGATAAACATGGGCGCTACGCAAACTCTGTTCTAATGTCTGTTCAGACTTGTTGAAGAGGATGGCTGGATTTGGCTCAAAGTATTGTAATTTTGAACTAACAAATCTCGAATTACCTTTTCCCCCCTCTAAAGCTGGTGTTGCTAATAACGTGACTTCCCTTTGAATGTTATTCTCTTTAAGACTGTTGCTGACTCTAAGGCTTTGACATTTTTTTGTCCCCGATATTTCTCCTGTTCTTAATCTTCACCTGTTGTCATCTGCTAGGACCGCACTGTACCTCCAGGAGGAGGACAAAGGGGCAACTTCCTCTGTCCAGGATGTCATTGCTGCTTTTCTTTTGGAGTGGAAGTTTTATGTGCACTTTCCTATGTTCCCTCTCCCTGGGGACTAGCACATCACTTCCATGACACGCACAACAATTGTGGCCTGGGGTTTGACAAGAATACCATAAGTTTACCTTCAGTTAGCACAAGTATTTAATGTTGCATCTTGCAACTCAAGTAGT TCONS_00102316 TCONS_00102317 TCONS_00102318 TCONS_00102319 TCONS_00102320 TCONS_00102321 TCONS_00102322 TCONS_00102323 TCONS_00102324 TCONS_00102325 TCONS_00102326 . 3' 9227 TCONS_00102316 TCONS_00102317 TCONS_00102318 TCONS_00102319 TCONS_00102320 TCONS_00102321 TCONS_00102322 TCONS_00102323 TCONS_00102324 TCONS_00102325 TCONS_00102326 . 3' 10095 EMBV3_40836 CCCGTCTGTGTGCCCTGATGGCTTCTGCTTCATGGGTCACTGGTTTTGTCAACTCCTTAT Gene GeneID:532291|LOC532291:XM_002697488:171_cdna Constitutive 0 NULL GeneID:532291 23 GENE LOC532291 NULL similar to hCG1805526 EMBV3_40718 AGGCAAACCTATCAAAGTGGAGCCCGCCCCCGGGGAGAAAGAAGACCCAGAAGACAGTGA Gene GeneID:528272|NPAS1:XM_002695105:571_cdna Constitutive 0 NULL GeneID:528272 18 GENE NPAS1 NULL neuronal PAS domain protein 1 EMBV3_27668 ACCCCAACATACCTAAAGAGTCCTTTCCAGGTCATCATCAGCTCCCGAAGTGGCTCCTGG Variant GeneID:281167|FMO3:NM_174057:61_cdna 502^644 1 EMBV3_06352 GeneID:281167 16 GENE FMO3 MGC128044 flavin containing monooxygenase 3 EMBV3_23662 CCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCA Gene BVT0102_078876 - 1 EMBV3_09067 GK000009.2:3163482-3673463 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00152753 TCONS_00063037 TCONS_00230737 TCONS_00207277 TCONS_00152743 TCONS_00218448 TCONS_00210177 TCONS_00117964 TCONS_00232348 TCONS_00186108 TCONS_00110373 TCONS_00252934 TCONS_00124583 TCONS_00109859 TCONS_00251760 TCONS_00009883 TCONS_00199544 TCONS_00218891 TCONS_00175545 TCONS_00011804 TCONS_00040583 TCONS_00208127 TCONS_00161191 TCONS_00251524 TCONS_00021596 TCONS_00234064 TCONS_00011198 TCONS_00066192 TCONS_00089951 TCONS_00189806 TCONS_00206861 TCONS_00152647 TCONS_00130259 TCONS_00062743 TCONS_00007555 TCONS_00063180 TCONS_00218881 TCONS_00030202 TCONS_00111546 TCONS_00153219 TCONS_00185807 TCONS_00080733 TCONS_00252056 TCONS_00007501 TCONS_00124845 TCONS_00107446 TCONS_00176254 TCONS_00199062 TCONS_00209870 TCONS_00047865 TCONS_00006827 TCONS_00022065 TCONS_00142489 TCONS_00218865 TCONS_00197184 TCONS_00249012 TCONS_00117619 TCONS_00071185 TCONS_00031911 TCONS_00119942 TCONS_00066285 TCONS_00129415 TCONS_00222115 TCONS_00233344 TCONS_00040860 TCONS_00188225 TCONS_00221977 TCONS_00250938 TCONS_00251546 TCONS_00046756 TCONS_00010780 TCONS_00223365 TCONS_00249570 TCONS_00209529 TCONS_00010588 TCONS_00218178 TCONS_00156845 TCONS_00117592 TCONS_00222010 TCONS_00007432 TCONS_00115687 TCONS_00251705 TCONS_00109028 TCONS_00030297 TCONS_00165813 TCONS_00209829 TCONS_00161792 TCONS_00153777 TCONS_00252354 TCONS_00023615 TCONS_00007360 TCONS_00148453 TCONS_00135547 TCONS_00009945 TCONS_00251930 TCONS_00073576 TCONS_00040195 TCONS_00218856 TCONS_00123618 TCONS_00039853 TCONS_00238420 TCONS_00251846 TCONS_00030295 TCONS_00187688 TCONS_00177280 TCONS_00091651 TCONS_00148279 TCONS_00231613 TCONS_00110387 TCONS_00187057 TCONS_00039908 TCONS_00229751 TCONS_00245928 TCONS_00080765 TCONS_00070957 TCONS_00088087 TCONS_00056728 TCONS_00110644 TCONS_00206426 TCONS_00037933 TCONS_00006026 TCONS_00231487 TCONS_00249137 TCONS_00251627 TCONS_00066279 TCONS_00179810 TCONS_00219970 TCONS_00116955 TCONS_00056819 TCONS_00007719 TCONS_00238326 TCONS_00038667 TCONS_00019198 TCONS_00156732 TCONS_00040178 TCONS_00040745 TCONS_00201770 TCONS_00107582 TCONS_00185942 TCONS_00056147 TCONS_00088288 TCONS_00239418 TCONS_00190322 TCONS_00116101 TCONS_00070840 TCONS_00010472 TCONS_00071861 TCONS_00030941 TCONS_00123170 TCONS_00176255 TCONS_00124110 TCONS_00040698 152 XLOC_155966 XLOC_092518 XLOC_037764 XLOC_140227 XLOC_125795 XLOC_092508 XLOC_131768 XLOC_128687 XLOC_072130 XLOC_141833 XLOC_112161 XLOC_066277 XLOC_155875 XLOC_076127 XLOC_065763 XLOC_154701 XLOC_005436 XLOC_121197 XLOC_132210 XLOC_105326 XLOC_007354 XLOC_024399 XLOC_126640 XLOC_098083 XLOC_154465 XLOC_012269 XLOC_143543 XLOC_006749 XLOC_040909 XLOC_054732 XLOC_115843 XLOC_125381 XLOC_092412 XLOC_078970 XLOC_037470 XLOC_003116 XLOC_037907 XLOC_132200 XLOC_016457 XLOC_067446 XLOC_092984 XLOC_111860 XLOC_049617 XLOC_154997 XLOC_003062 XLOC_076388 XLOC_063356 XLOC_106033 XLOC_120715 XLOC_128381 XLOC_027997 XLOC_002389 XLOC_012736 XLOC_086914 XLOC_132184 XLOC_118846 XLOC_151955 XLOC_071785 XLOC_042957 XLOC_018156 XLOC_073015 XLOC_040999 XLOC_078128 XLOC_135424 XLOC_142826 XLOC_024674 XLOC_114268 XLOC_135286 XLOC_153881 XLOC_154487 XLOC_026895 XLOC_006331 XLOC_136665 XLOC_152513 XLOC_128040 XLOC_006139 XLOC_131641 XLOC_095305 XLOC_071758 XLOC_135319 XLOC_002993 XLOC_069856 XLOC_154646 XLOC_064933 XLOC_016551 XLOC_100653 XLOC_128340 XLOC_098677 XLOC_093539 XLOC_155295 XLOC_014282 XLOC_002921 XLOC_090333 XLOC_081770 XLOC_005497 XLOC_154871 XLOC_045340 XLOC_024012 XLOC_132175 XLOC_075170 XLOC_023670 XLOC_145087 XLOC_154787 XLOC_016549 XLOC_113733 XLOC_107054 XLOC_056424 XLOC_090161 XLOC_141101 XLOC_066291 XLOC_113105 XLOC_023725 XLOC_139245 XLOC_150855 XLOC_049649 XLOC_042734 XLOC_052874 XLOC_034531 XLOC_066546 XLOC_124948 XLOC_021762 XLOC_001589 XLOC_140976 XLOC_152080 XLOC_154568 XLOC_040993 XLOC_109580 XLOC_133287 XLOC_071121 XLOC_034622 XLOC_003279 XLOC_144993 XLOC_022490 XLOC_009878 XLOC_095192 XLOC_023995 XLOC_024559 XLOC_123415 XLOC_063492 XLOC_111995 XLOC_033950 XLOC_053075 XLOC_146084 XLOC_116357 XLOC_070270 XLOC_042617 XLOC_006023 XLOC_043631 XLOC_017192 XLOC_074724 XLOC_075662 XLOC_024514 Coding TCONS_00223365 XLOC_136665 NonCoding NonCoding - 7:99197616-99198194 - TSS167363 578 1 TCONS_00223365_1 46 0.998269896193772 1 0 0.000120648814424882 6.20409940898881e-05 5.51405551987913e-05 7.67844353482926e-05 2.53681650352793e-05 0.000349004910194905 6.67386467464298e-05 9.48956839952509e-05 0.000136259884344415 0.000309839721293351 0.000106745086248943 9.34329214631254e-05 5.07325207223975e-05 7.83485220371222e-05 0.000264162962598948 0.00439530801700214 0.00120968757694069 0.0042704637380745 3.04795312933588e-05 4.11579086485804e-05 7.71600047162288e-06 0.00131452670583257 0.00344702967144713 0.00588780578812554 6.32849547407575e-05 8.55096297502652e-05 7.47435494178299e-05 0.000452121394965465 0.000429115516678603 0.00059472107130323 XM_001250798.4 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant 2, mRNA. 2e-13 80.6 94.23 0.0882352941176471 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 ACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATGGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATTGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATGGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAG TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 EMBV3_37457 TCCTGGTGGATTTAATGTGTGCGCGTGCGAAAAGGCAGCAGACAATTATGAGTGCAACCG Gene GeneID:100337491|LOC100337491:XM_002685387:328_cdna Constitutive 0 NULL GeneID:100337491 2 GENE LOC100337491 NULL LY6/PLAUR domain containing 6-like EMBV3_35412 CTTGGTAGCATGGCAAACTCTATAATTAAAAATCTGCAGTCACGTTGGAGGTCACCAGCC Gene GeneID:541247|RIF1:XM_002685359:246_cdna Constitutive 0 NULL GeneID:541247 2 GENE RIF1 NULL RAP1 interacting factor homolog (yeast) EMBV3_28442 GGGACTCAATAAGGAAGGTCAGATTATGAAGGGGAACAGAGTGAAGAAAACCAAGCCCTC Gene GeneID:615823|FGF12:NM_001079789:132_cdna UTR3_Alt 2 NULL GeneID:615823 1 GENE FGF12 NULL fibroblast growth factor 12 EMBV3_40810 ATCTTCACTCATTAATTCATTCGCTCTTTCACAGTCATTTCCCGAGGCCTTCACCTGCGC Gene BVV0101_018137 - 1 EMBV3_27797 GK000015.2:38166440-38336926 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061133 1 XLOC_036933 NonCoding TCONS_00061133 XLOC_036933 NonCoding NonCoding - 15:38201177-38247796 - TSS45594 2541 1 TCONS_00061133_9 150 0.314443132624951 5 0.945600411858081 0.00188780700263267 0.000831185999820136 0.00120584633433517 0.000342062749411469 0.000654262302657352 0.000607204951890537 0.000621984416820928 0.000543524438378047 0.00058447482767508 1.37493871652181e-05 1.03302410543932e-10 1.81010769838416e-10 6.15008967663042e-05 0.000301813654004559 0.000101510688766324 0 0 0 0.00146403983555019 0.00112951929925602 0.000154979577361272 0 0 0 0.00250845563901231 0.000782799744695881 0.00128682443961312 0 2.28026054472185e-10 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 838 93.38 0.219205037386856 0 noncoding 0 0 0 0 -0.0410747152976473 0.781093178221892 -0.0290218115247239 0.567216079073226 CCTTTGTTGGCAAAGTAATGTCTCTGCTTTTCAATATGCTATCTAGGTTGGTTATAACCTTCCTACCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAGGCACCATCTGCAGTGATTTTGGAGCCCCAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTCCCATGAAGTGATGGGACCGGATGCCATGATCTTCATTTTCTGAATGTTGAGGTTTAAGCCAACTTATTCACTCTCCTCTTTCACTTTCATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTCCGGGCAATATTGATTCCAGCTTGTGTTTCTTCCAGCCCAGTGCTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTAGCGCATTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGATTTCTCAAGAGGCAGGTCAGATGGTCTGGTATTCCATAAAACTGGTTACTTATATCAAATTCTTATCCATTGTACCAGATCTGCCTATGCCAGAAGACAGTTTCCAACACATTTATAATTTGTAATCTATTATGAGACTTAAAATACCCACTTTCCCATAGTAAATACAGAATTCCTTTCAGTTCAAATATCTATGTATGAAAAACAATTTTCTATTCTGCATAACACCATTTCACATAACTGGTTGTAAAACACTGTGTACTTTGTAGTCCTAATAAATTGCTCTGTAATTAATAACCAAGAACATTTGAGTAGCACTTAACTGTGTTCAGTTACTATTACCACCATTATGCATATCAGGAAAAATTAAGATTCAGACAAGTAAAGGTCAAGTTTTGTCTGATGAAACAGGACTCAGCCTCTGTTCCTGTGCTTTCACAACTTCTGATTTCTCTGTAATACTGATGATGCTTCATACAAACACACCAGAGATCAAATATGAAAAATCAAAACCATGGAAATACACTCGAGAACTGGAGGATGGAAAACAAAATATAAGAATTATATATATTTAAGTCCAGCTTCCCTGTTGCGATATAAACCATTATTGAACTGCAGAAACCTAGAATAATTCTTGTAAAAACCTGTTTAAATACGGATTCAAGCCCAAACCTAAAACACCACAATTGCCAAATAGCTCTGCGGTACTTTTCCTTCAAAACACATAAAATTTGTGGTTGATCGTCAGATTAATTTTTCTTCTTCTCTCACTAGACTGCACCTAAAATCGGCCTGTGACTGCTTTCTTCACCTCTTCATCCCCAGCACCTGGTACAGTCTAGCTGGTAGTTTCTTTTAACAGAATGGATTCAAAAGAAAACAAGTGAGCTGCATCAGGGAATGTTCTGGAAACTTCTGCTTTCTCGAGGTCTGGACACTTTTCCAAAGGCAAGCTAGCATTCTGGCCTTTCCCCTGCTTGTTCGCAGCTGTGTGGCGGCCTGCAAGTCACTCAGCATGTCTGTACAGCTGTTTCCTCCTCAGTTTAATGGGAAGGACCGGAGGACCTGCCCCCTGACGTCTGCACTGCAAGGGAGGTTGGCCCTCCCGCCGGCGAAGGCTCCGAGTTTGCTGCGGGGACTCTCCGGTCTCCTGGCAGACAGGATAGCAGTGGTACTCCCTCACTGATCTTCACTCATTAATTCATTCGCTCTTTCACAGTCATTTCCCGAGGCCTTCACCTGCGCTCTCTCCTCCTCACAGCAGACGCCTAGACCAGCCGTTCTCAAATGCAGACAGCCAAAGACATCTTATTAACTGTTAACTCAGTTCTTTCTAGGACGCCTGGTTTCTCCAGAAATCGTTGGCGGAAGGTAACCTTCATAGGGAATGCCGCTCATTATGCTCGAGAAGCCTGGCGTTGAGTCGGCGCGCGGAGGAAAGCTCCCGTCAAGCCCGACGGGGCAACTGGCGGGCCTGGGACCTCACTGCGCAGGCGAGGGAGCAGCAGCTCGGCGCCGTCAGCTGCAAAGAAAATCCCCGCGCAGGCGTGATTCCGCAGGCATTAGGTCAGTGGAGGTGGCCCAGGATGGATATTGGCATTGCCGGCAGAGCACAGTGATTCAGAGGCACCAGGAGTGGAATGATAACACCTACTGGATATCTGAGGTTCGAGAGGTTCTGGTAGAACAGGAAATGGAGGATTTCATTGTTTCATGGCAGAGATCCTGTCTTCAGTATGCTGGGCAGAATGTGAAAACCCTGCACGTGGCTCTGGCATTTTTGTGTGCAGACAGGAGCCAACACCAAGGTGACTGGCAGAACACTGGAGCCCCTGGGTGAGATTTAAGAAGCTTCATGAAACTCTCCTTTACCACTAAAAAAGGCCAAGCTGACCTTCAGACTGAAAACCAGCTCCAACCAATTGAGTGAGTCATCTTAACTGGGTCTCATCCCTTAGCCAAGCCATGCCCGCCTGATGCTGTGTGGAGCAGACATAAGCCTTCCTAGCCCAGCCCTG TCONS_00059005 TCONS_00059006 r 3' 34739 TCONS_00059005 TCONS_00059006 r 3' 34873 EMBV3_24300 GGCTCCACAGTCCCCCAGTTCCAGGTTCTGGGTGGCAATCCAAGCCTACCTTGTGGATGA Variant GeneID:513202|LOC513202:XM_002692430:419_cdna 249^366 1 EMBV3_41571 GeneID:513202 13 GENE LOC513202 NULL hypothetical LOC513202 EMBV3_04199 CAAGATCCCTGATGGAGAGAGGGTGGACTTCGATGACATACACCGGAAGCGCATGGAGAA Gene GeneID:286816|TNNT2:NM_174771:28_cdna Constitutive 0 NULL GeneID:286816 16 GENE TNNT2 NULL troponin T type 2 (cardiac) EMBV3_43145 ACTCAAATTATGGTTGGAGAGCCCTAAGACTGTTAGCACGGAGAAGCCCTCACTTCTTCC Gene GeneID:100138748|THOC1:XM_002697732:211_cdna UTR3_Alt 3 NULL GeneID:100138748 24 GENE THOC1 NULL THO complex 1 EMBV3_08769 CTGCCAATGACAGGAACAGACTTGGGAACAAACACAAGCCCACAGCACCACTTTGAACAG Gene GeneID:516584|HIAT1:NM_001102038:113_cdna UTR3_Alt 2 NULL GeneID:516584 3 GENE HIAT1 MGC139615 hippocampus abundant transcript 1 EMBV3_37954 TAACTCATGCTTGAGTAATTTGGGGAGCATTCAGAGGTCCTCACACCAAAGTGGTCCACG Gene BVV0101_046850 + 0 NULL GK000007.2:70592710-70621842 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15611 TGAGGCCATCAGCAGGGTTTTATAGAGTGAAATGCTGAAAGGTTTCATTGAGCTCCCCGG Gene GeneID:613449|DCLK1:NM_001109962:190_cdna UTR3_Alt 2 NULL GeneID:613449 12 GENE DCLK1 MGC152477 doublecortin-like kinase 1 EMBV3_01817 ACATCTCAAATTATTATACACATACAAAATAGGTACAGAGTCTCTCGCTTCCTCCCACCC Gene BVV0102_322500 + 0 NULL GK000019.2:37105012-37113476 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09323 TGGGGTGGAGTCTGCGCTGGAAGCTTTTCCTTTTGTCCACTGGAGAGAGAACTGTTTACA Gene GeneID:509970|RAB7A:NM_001035081:23_cdna Constitutive 0 NULL GeneID:509970 22 GENE RAB7A MGC127597 RAB7A, member RAS oncogene family EMBV3_33145 GAGCCCTGAGCTGTCTTCTATGCACTTCTGACGTGTCTCCTGTTGGGTCTCTGTGTTCTT Gene GeneID:338082|ATP6V1B2:NM_176671:2_cdna UTR3_Alt 2 NULL GeneID:338082 8 GENE ATP6V1B2 NULL ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 EMBV3_37119 TTTCAGAGTGAGGAACAGCAGCAAACAGAGGTCTAAGAGGATTTCAAAGTGAATGCCCCC Variant GeneID:281099|CSN2:NM_181008:8_cdna 213^710 1 EMBV3_02984 GeneID:281099 6 GENE CSN2 MGC133765 casein beta EMBV3_10113 GCTCTAGCTGTAGCACGTCTTAGAATCTGACCTGACTGCAGAAACGTTTAACACTGTGAC Gene BVV0102_053290 + 0 NULL GK000003.2:114278199-114309358 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171444 TCONS_00171446 1 XLOC_103821 Coding TCONS_00171446 XLOC_103821 Coding Coding TRPM8 3:114223069-114283318 j TSS127881 4137 1 TCONS_00171446_5 658 0.114092337442591 16 0.931599389191342 0.000111919862532567 4.87142761192361e-06 6.95549293724354e-06 2.16107394213247e-05 1.20375173819699e-05 6.02845252578297e-06 2.1184791457347e-05 1.76284687107398e-05 8.73370532290129e-05 1.12539403189407e-06 4.22453984145345e-05 3.02086435138682e-06 0 2.38803187489291e-06 1.42509672881988e-05 7.52651017167851e-149 0 0 7.46334529940354e-30 0.000326212811848621 0.000225528344396707 2.87224093234395e-65 1.17840891663526e-138 0 0.00012755792964663 3.41181375587668e-06 3.33432571476433e-302 1.28682564788368e-05 2.68093378740004e-05 5.32473527987401e-05 XM_005204960.1 TRPM8 PREDICTED: Bos taurus transient receptor potential cation channel, subfamily M, member 8 (TRPM8), transcript variant X1, mRNA. 0.0 7295 100.00 0.977519941986947 NM_024080.4 TRPM8 Homo sapiens transient receptor potential cation channel, subfamily M, member 8 (TRPM8), mRNA. 0.0 2984 80.43 0.777616630408509 TCONS_00171446_5 sp|Q7Z2W7|TRPM8_HUMAN TRPM8_HUMAN Transient receptor potential cation channel subfamily M member 8; 0.0 1252 95.08 0.986322188449848 1 coding 0 0 0 0 0.0511443861112701 0.702415817592414 -0.0351510016186408 0.460976196171066 GTTGAGAGAATGGACTCTGGAGCCAGCTCTTCTGCATGACTTAACCTCTGCAAGTTACTTAACCTTTCCATGCCTCCATTTCCTTGCACAGTGTCTGCTGACCTTCAGGAAGTCATGTTTACAGCTCTTATAAAGGACAGACCCAAGTTTGTCCGCCTCTTTCTGGAGAATGGCTTGAACCTGCGGAAGTTCCTCACCAATGATGTCCTCACGGAGCTCTTCTCCAATCACTTCAGCTCCCTGGTGTATCGAAACCTGCAGATCGCCAAGAATTCCTATAATGATGCCCTCCTCACCTTTGTCTGGAAACTGGTTGCTAACTTCCGAAGAGGCTTCCGGAAGGAAGACAGGAATAGCAGAGATGAAATAGACATAGAGCTCCATGATGTGTCTCCTATTACTCGGCACCCCCTGCAAGCGCTCTTCATCTGGGCCATTCTTCAGAACAAGAAGGAACTCTCCAAAGTCATTTGGGAGCAGACCAGGGGCTGTACTTTGGCCGCCCTGGGGGCCAGCAAACTTCTGAAGACTCTGGCTAAGGTGAAGAATGACATCAACGCTGCAGGGGAGTCGGAGGAGCTGGCAAACGAGTACGAGACCCGGGCAGTGGAGCTGTTCACAGAGTGTTACAGCAGCGATGAGGACTTGGCAGAACAACTCCTGGTCTATTCCTGTGAAGCCTGGGGGGGAAGCAGCTGCTTGGAGCTGGCAGTGGAGGCAACCGACCAGCATTTCATTGCCCAGCCCGGGGTCCAGAATTTTCTTTCCAAGCAGTGGTATGGAGAGATTTCCCGAGACACCAAGAACTGGAAGATTATCCTGTGTCTGTTTATTATACCCTTGGTTGGCTGTGGCTTTGTATCATTTAGGAAGAAGCCCCTGGACAAGCACAGGAGGCTCCTGTGGTACTACGTGGCCTTCTTCACCTCCCCGTTCGTGGTCTTCTCCTGGAACGTGGTCTTCTACATCGCCTTCCTCCTGCTCTTCGCCTACGTGCTGCTCATGGATTTCCACTCTGTGCCCCACGCCCCAGAGCTCGTCCTCTACGCGCTCGTCTTTGTCCTGTTCTGTGATGAAGTGAGACAGTGGTGCGTGAACGGCGTGAATTACTTTACCGACCTGTGGAACGTCATGGATTCACTCGGGCTTTTCTACTTCATAGCGGGGATTGTCTTTCGGCTCCACCCTGCTAACAAAACCTCACTGTACTCGGGACGAGTGATTTTTTGCCTGGATTACATTATATTCACCCTAAGGTTGATTCACATTTTCACGGTCAGCAGAAATTTAGGACCCAAGATTATAATGTTGCAGAGGATGCTGATCGACGTGTTCTTCTTCCTGTTCCTCTTTGCCGTGTGGATGGTGGCCTTTGGTGTGGCCAGGCAGGGCATCCTTAGACAGAACGAGCATCGCTGGAGGTGGATCTTCCGCTCAGTCATCTATGAGCCCTACCTGGCCATGTTTGGCCAAGTGCCCAGCGATGTGGATGGTACCACGTACGACTTCTCCCACTGCACCTTCACTGGGAACGAGTCCAAGCCCCTGTGCGTGGAGCTGGACGAGCACAACCTGCCCCGCTTCCCCGAGTGGATCACCATCCCCCTGGTGTGCATCTACATGCTGTCCACCAACATCCTGCTGGTCAATCTGCTGGTCGCCATGTTCGGCTACACCGTGGGCACCGTCCAGGAAAACAACGACCAGGTCTGGAAGTTCCAGAGGTACTTCCTGGTGCAGGAATACTGCAGCCGCCTCAACATCCCCTTCCCCTTCGTGGTCTTCGCCTACTTCTACAAGGTGGCCAAGAAGTGCTTCCGGTGCTGCTGCAAAGAGAGGAGCACGGAGCCCTCCGCCTGCTGTTTCAGAAATGAAGACAACATGACTCTGGCATGGGAGGGTGTCATGAAAGAAAATTACCTTGTCAAGATCAACACAAAAGCCAGCGACCCGTCAGAGGAAATAAGGCATCGTTTTAGACAGCTGGATACAAAGCTTAATGACCTCAAAGGTATTCTGAAAGAGATTGCTAATAAAATCAAATAAAACCGCATGGACTCTGATGGAGAAAAATTTAATTCTAGCAAGGTCGCATCAGACGTCTGCATGGAGAAGATTCAAGGGATCCTGCTGAACAGTTGCATCTTGACAACAGCTGTGTTCCTGACTAAGCGAGAATTGTTCAGGCCCCTGGGTGCACCTTGATGGCTTTAATCACTCCAGTGTGCTCAGTCTGAGGATAAAATGTGTCCCCGATTTCACTCAAGAAGGCGGATATAAAGGAAGAACATTTCCTGCTTCCCCCAGGCCGCCCTGTTGCTCTCCGCGTCTCCGGGGCCAGAGCCCCATGTGGATGGTCTGAGCTGCCCGGTGTTCTCCCGTTTCCTCCTCTTGTCCTCCTTGGACCCATGCATGTTAGGGAACGTCTCTCCTAGGAATAGCAACCTGGTCTTGCTTTCTCTCCTGGATCCTTACTTTGTCTTCAACTGATTCTCTTTTGTTTCCTTTTTTTTTTGTATTATGTGACTACTTAGCTGTCACAGTGTTAAACGTTTCTGCAGTCAGGTCAGATTCTAAGACGTGCTACAGCTAGAGCACTCTGGTTTTTTTCAGGAGAAACTCTCATCATTGCTCTCTACGATTTTAATCATTAAAGCAGGTAATAAAGCATTATCTTCCTGCACGTGCCCCAGGAACCCAACTTGACGGAAGTACCCCCTTCCTAGCAATGCGAAAAGGCACCTGAAGATGACCTCCCCAGAGGCGCATCTGGTTTTATTTTCACTGAGTGTCCCCTTGCTTATTATTTTCCCATTATAAATAATTCATGGGTATGATAGGAAATTCCTGGGTATTATACAAAACATAGACTATGAGGAAAGTAGAAAATATAAACAGTCTCACTATCTGAAGATAATCACTGCTAACAAGTCAGAGTGTTTTTTCAGGTCTGCTTTTTTTTTTTTCCTATGCATGTTTTATGTCTCTTTTAAAATTTTATATAAAGTCAGCATATAGATTTTACATAAGCTTTTTCACTTAATATTTTATCCAAGATGTACTCTTTATATACAGGGTCTTAAACTTTACATTAACACTTGCTTGCTGTTCAGTCTCTAATGATTTCTGCTATGTTGGTCATTGAAGGTGGTTTCTTGTTGGCCAATGGGGTGAGCATCTATGCGTATGAATCTTTTTCCACAGCTGGGAAAATTTCCCATGGCTAGATTCCCAGGAATATGTACTTCTTAACAAAGTATTTATAAGGTTTTTTACAGAAATGTTTAGCAAATAGGAATTGTTAGCTTGATATCAGTTCAGTTCAGTTGCTCAGTTGTGTCCAACTCTTTGCGACCCCATGGACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAATTCCCGGAGTTTACTCAAATTCATGTACATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCTCCCGCCTTCAATATAAGTCTTATCAAACTATTTATAAGGCTTTTTCAGAAATGTTTAGCAAATGGGAATTATTAACACGATACAGAACCTAGAACTCCTAAGATAAAATATTGCATCTAATCCTTAGTTTAGGAAGAAACCAGTATACTTATTTCAGTATTATAGAGGTGAGGGCATTGGTATAGAATTCAAGGTATTATGTTATTGAACGCCTGTACTCCCAGCTTTGTCTGGAAGTGGTGTTATCTTTGCACAAAAGAAGTGCATAAAGTTATTTAAACATCCGTGATTAGTTTTTCCACTTTGAATAGAATGTACTCAGTGGCTAAAGAAGAAAATCTTAGAAGGAAGCTATTAAATGATTATCTCATTAGAAAAACTACAAAAGCATGAACCAAAAAAATGTTTTTCTGTTTTGTCTGGGCAGTAGTTAAAATGACTCCTCACAACATTCATGATGTTTGTAGGGAATGAACACAAATAAAAGGTGTCTTTTTACCTAAACCTCTTTAATGACCTGACAAGGAATAGTGGTGGGGATGATCAATTCATGGTTTTGGATTCTGAAAGGTGGAATAAAATTTACTTGACAAAAATTGTCGATGAATGGAATTTTCAAGTTTTCTCTGTTAGCGAGAGAATTTTGTTTTTGTTTCACC EMBV3_15963 GATACCCCATCAAGGCACCCAAGCTGCCAGGCTTTGGGCCTGGAGGAGTGGCTGGTGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33594 CTCCCGTTTCCTCCATGGAATGAACATAGGACAGCACACATTCATTTTCTAAGAAGCAAA Gene BVV0101_055459 + 0 NULL GK000021.2:67457312-67561868 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120084 1 XLOC_073054 NonCoding TCONS_00120084 XLOC_073054 NonCoding NonCoding - 21:67477665-67490963 - TSS89765 13298 5 TCONS_00120084_12 87 0.413896826590465 1 0 0 0 7.95307121119062e-07 0 0 3.36239739409323e-08 0 0 5.93332871633816e-07 1.16301864075681e-06 8.26295609118238e-06 0 2.15768049838948e-07 3.53736550857008e-07 2.03622879398709e-05 0.00294395230926083 0.00157895282881588 0.00084082161355538 0 6.30922986595234e-07 9.51184368134738e-08 0.000148477078627314 0.000186185277526731 0.00042365152730653 0 1.50114001477746e-07 5.6294660667387e-13 9.01330192456353e-07 3.48245296743566e-06 6.78175420597438e-07 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 928 83.43 0.0659497668822379 NR_002730.2 BRD7P3 Homo sapiens bromodomain containing 7 pseudogene 3 (BRD7P3), 1e-96 361 71.30 0.0552714693938938 0 noncoding GTCAATACAGGTGCAAATGAATGAAGGAGTATAATGCCAGGCCTAGGCCAATGATGAGTATCCTGGGGTATCTGAATCGAGAATTTTACTTTACTAAGCTTTATAGCTCCAAGATCTATTAGAAAAAGAAAATACCCCATTAACTCTGTGGGACATGATCATATAGCAGAAGTGAAGTGTCAGTTCTTATTCTTGGTCTGTTGAGGTTCTCGAGTATAGATTTTATTTTAAGTAAATCAGTGTGTGAATAAAATATGTAAATGAATGAAGACAAGGAAGGCGCTGAGAGGACCAATTATGAGAGTACATAATTAAATAAGGAACAAGACTAATACCATTTGGAAGTGCTGAGTTCCAATAAAATTAAATAGATCAAAGCTCTTGTACTTTTGAGTAAGAAACAGACAAGACAATTTCATGTAAGAGTCAATGTTGCATTTGATGAAGAGCAGATTTTTTCACTGCTGTTATTTTTTACGTGTTGCTCCCTTTTCCGAAAGGCTTTATTTTTTTAAGAGCAGTTTTAGGTTCATGGCATAATTACGCAAAATGTACAGGGATTTCCCATAGGCGCCCTGGTTCTACATGCGTATCGCCTCTCCTATTATCAACATCCCACACCAGAAGGGTACATGTATTACAACTGGTGAAGCTTCACCGACACATCATTTTCACCCAAAGTCCATAGTCAACTTCAGGGTTCACTCTTGGTTGTAAATTCAGTGGCTTTGGACAAATATATTGGGTTGGTGAAAAAGCTTCTGTTTCTCTGTACCATTTTATGGAAAAACCTAAAGGAACTTTTTGGCCAACCCAATATAATGACATGTATCTGCCATTGTGGTATCATACAGAATATTTCGCTGCCCTAAAAATCCTCTGTGTCGCTTCATTTTTCTCTCCCTTTAACCCCTGGCAACTTCAGCATGTAGTAATGTTGGAATTATACTGTACATAGCCATTTCATATTGTCTTTTTAAATGTAGTCATACTAAATTTGAGGCTCCTTCATGCCTGTTTATGGCTTTGATAGCTCATTTCTTTTTCGTGCGAATGACCTTCCATTATTTTGATGTAAAACGGTTTGTTTATCCATTTACCCACTGAAGGATGTGTTGGCTGCTTCCAAGTTTTGCCAATTATGAATAAAGCTGGTATAAATATCCATGTGGAGGTTCCTGTATGGACATAAAATTTCAGCTCCTTGGGGTAAATACCAAGGAGTGTGATTTCTAGATAGTATGGTAAGAATATGTTTAGTTTCATAATAAACTGCAAAATATCTGCTCTAATAGGTGTGTAGTGGTACTTCATTGTTTTAATTTGCATTTCCCTCATTGAGCGACTTCACTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCACGGAGAATCCCAGGGACAGAGGAGCCTAGTGGGCTGCTGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGTGACTTAGCAGCAGCCTCAATAGCATGACATATAATGTGGACTGTCTTTTTGTATGCTTATTTTTCATCTGTTTATCATCTTTGTGAGATATCTGTTCAGGTCTTTGATTCATTTTTTAAGCAAGTTGTTTATTTTCTTACTGTTGATTCTAAGGATTCTTTGTAAGTTTTGGAAAGAGTCATTTATTAGACATATCTTTTGCAAATAGTTTTCCCCCAGTCTATGGCTTATGTTTTGTTCTTTTGAAAGTTTCTTTGCAGAAAAGAAAATGAATTGCAGCTTATCAGTTATTCACATAATATATCTTTGGTATTGTATTTAAAAAGTCATTGTCAAACACAAGATCAGCTAGATTTTCTTATGTTTTTGTTCTCGGGGTTTTATTGTTTTTTATTTTTCATTTAGGTCTATAATCCATTTCGAGATAATTTTCAGGAAGGGTGTAATATCTGTGTCTATGTTTCTTTTTTTTTTTTCTTAATGTTGACATCCAGTTGTTCCAGCACCACTTATTGAAAAGATTATCTTTGTTCCATTGTATTTCCTTTGATCCTTTGTCAAGGATCAGTTGTCTATATTTTTGTGGCCTTATTTCTGGGCTCTCTTCTGTTCCGTGGATCACTTTATATGTTCTTTGACCATTACCACACTGTCTTGATTATTGTAGCTTTGTAGTAAATCTTGAAGTCAGGTGATGGCAGTCCTCCAACTTTGTTCTTCAATATTGTGTTCACTGTTCTGGTTTTTTGGCCTGTTCATATAAACTGTAGGATCATGGTGTTTACAACCACAGAGCACCTGCTGGAACTTTAATTGGAACTGCCTTGAATCTATAGATCGAGTTGGAAAGAGCTGACGTTCAGATAGTATTAACTCTGCCTATCCATGAGCACGGAATACCTCTACATTTTAGTTCTCTGGTTATTTTCATCTGAGTTTTGTAGATTTCTTCATATGGTTTTTGTTCATATTTTCTTAGATTTATACGGATTTCATTTTTTGCTTGTCAATTTAATTTTAAATTCCACTTGTTCAGTGCTATTATATAGGAAAGTGATTGACACTTATTTACCTTGTATCCTGCAGCCATGCTATGATTGCTTGCGAGTTCTTGTTCGTTGTTTTGTATTTTCTGCGTAGATGCCCATGGCATCTGTTAACAAAGACAGTTTTATTTCTTCTTTCACTAATAGTATACTTATTCTTTCTTCTTCTTCTCTTGCTATGTTTGCTATAACTTCTCGTACAATATTGAAAAGAAGTGTTGAGAGAGAACATCCTTGCTTTGATACTGATATTAGTGGGAAAGCTTCAAATTTCTCATTAGTTATGATATTAGCTATAGGTATTTTTTTTTGATAGGTAAAAAGTGGATTTATTCAGATTCAGAGAGAAGCACACTCCACAGACAGAGTGTGGGCCATTGCAGAGGGTGAGTAAGGCCTAGCTTTAGGTATTTTTTATAGATATTCATTGCCAAATTGAGAAAGTTCCTTTCTATTTCTAGTTTGTTGAGAGTTTTTTTCCCCTCATGAATATTGTGTTTTATCAGATGCTTTTCCTGCTTCTATGGATATAATCATGTGGGTATTCTCCTTTTGATCACATACCCTTTTGATGTCATATGCATAATGGGATAATATCCAGTGGATCATACTGTATTTCTTTTTATACGTTATTGGATTCATTTGTTCATATTTTGTTGAGGATTTTTGCACCTATGTTCATTAGAGATACTGTTCTATAGGTTTTCTTTTTTATTAATATTGCAGTAATGCTGGCTTCATAGAATGGGTTAGGAAATTTTTCTCAACTTTTATCTTCTAAAAGAGATTTTAAGAGAATTGGTATAATTGTTTTCCCTTAAATATTCTGGTAGAATTCACCAGAGACCCCACCTAGGTGTGGTGCTTTCTGATTGGGAAGATTGTAGTTGTTGTTTGGTTGCTCACTCGTGTCTGACTCTTTGTGACCCCATGGACTGCAGCACACCAGGCCTCACGGTCCATCACCAACTCCCAGAGCTTGCTCAAACTCACGTCCATTGAGTCGGTGATGCATCCAACCATCTTGTCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTCCAATCAGTTAGTTCTTTGCATCAGATGGCCACAGGATTGGAGCTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGGCTGATTTCCTTTAGGATTGGCTGATTTGGTCTCCTTGCTGTCCAAGGGACTCACAAGAGGCTTCTCCAACACCACAGTTTAAAAGCATCAATTCTTCGGCACTCAGCCTTCCTTATAGTCAAACTCTCGTACTGACTACTGGGAAAACCATAGCTTGGACTAGGCAGACCTTTGCTGGCAAAGTAGCGTCTCTGGTTTTTAATGCGCTGTCTAGGTTTGTCATAGCTTTTCTTTCAGGGAGCAAGCATGTTTTAATTTCATGGCTGCAGTCACTGTCCGCAGTGATTTTGGAGCCGAAGAAAATAAAGTCTGTCACTGTTTTCATCATTTCCCCATCTGTTTGCCATGAAGTGGTGGGGCTGGATGCCATGATCTTAGTTTTTTGAATGTTGAGTTTCAAGCCAGCTTTCTCACTCTCCTCTTTCACCCTTATCAATAGGCTCTTTAGTTCCTCTTCACTTTCTGCCATAAGGACGGTGTCGTCTGCATATCTGAGGTTATTGACATTTTTTGGGGCAGTCTTGATTCCAGCTTTTGCTTCATCCAGCCCAGCATTTTGCATGATATACTCTGTATATAAGTTAAATAAACAGGGTGACAATATACAGTTGTGGGCACATGTTGAGGACAGATCATGTAAGAAGCATTAGGATTGACCAGATTGTATTCTCCAAATTTTATTAACAACTCAAACATAATCTAGTCAGTTATGTTTATGACTAATAACTGGATGGACAGATGCTTGTGTCATTCAGAATTTATTTTCTTTCTCTTCATAGATACTGATGTATTGTTATAATTGAATGAATAAAAAATGTTATCTTATTAGTTTGAGCTGTTGCTACTGATGTTATAGAAAGAAAAAATTCCTAACCTACTTACATTTTTGATAAGCAACATATAGTACATTGCATATAATAATATTTCTGTTCTGGAGTACTAGCTGGCTTGCCATTTTGACTTTCTTCATATGATGGACATATGGTTTAATGATTCCTTGAGTAGTTACATAAATAAATGAACATATAAAATTGAATTAAGCAGAGTCACCACTGAGAATGTGAAATAAGGATATTTTACGAGATTGTGGGTATTTTCTTTTTCTGTTTTTTTTTTTTTAATTTAAATTGACATATAGTTAATACATGGGCTTCCTCGGTAGCTCAGCTGGTAAAGAATCCACCTGCAATGCAGGAGACCCTGGTTCGATTCCTGGGTTGGGAAGATCCGATGGAGATGGGATAGGCTACCCACTCCAATATTCTTGGGCTTCCCTGGTGGCTCAGCTGGTAAAGAGTCTGCCCACAATGCAGGAGACCTGAGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAAAAGCGAAAGGCTACTCACTCCAGTATTCTGACCTGGAGAATCCGAGGGACTGTATATTGCTTCCATATCTTGACAATTGTAAATGATACTGCTGTTAATATCGATGAATGTGCATCTTTTTGAATTAGTGTTTTTTTTTTTTTTTCTAATATAAACCCAGAAGTGGAATTGTTGGGTCATATAATCATATTTTTGTGTTTTTGAGAAACCTCCACACTCTTTTCCACGTTCTACGTTCCTACCCATAGTATCTGAAGGCTCCCTTTTCTCCCATCCTTGCCAATACCTGTCATTTGTGTTCTTTTTGATGATGGTCAACTGACAAGTGTGAGGTGATACCTCATGTAGCTTTGATTTGCATTTGTGAGGCTGAGTGGTTTTTCATGTGCCTGTTGGGTACCTGGCATTTCCTCTTTGGAAAAAAATCAAGTTTTTCTGCCCAGTAAAATTTTTTTTTTAATATTGAGCTATACGAGCTGTTTGTATGTGTTGAATATATACCCCTTATTGGATGTATTTAAATGTACCCAAATAAAGATTTAAATGTACCCAGTTCTGCAAAAGTAGCATCCATTAAAATTATCTTTTATCCTGTTAAACTGTTAAAATATAAAGATAGTTTTGATAAGTGTCTTTCTTATTCTTATGTGGTGGTTTTAACAGTGGTTATAACATTATCTGAAAGTCAAATATTGGATTAATTATAAAGGTTTGAAGTTTATAACTACCTAGTTGCACATAACTAAATTACATTTAAATTCTAGTTTAATTCTCCCGTTTCCTCCACGGAATGAACATAGGACAGCACACATTCATTTTCTAAGAAGCAAAATCTAGGCAGTTAGCTTTGTGCGTTAAGAACCTAGAAATAAGTAAGTAAGACTTGAATTTCCTATCCTTGTATAGGATGATTTGTTCACAAACATTCAGTGGTATTTCAAAAGCGTCAACGTGTGTATACAGGAAATAGAAATCTCAAATAGGGACCAGTGATGGGAATATGGTATGAATCCAAAATCAGGTTTAGTCTAATTCAGCACAACTGAGAGCACAATGAAAAAAGAGAGCAGTCATTTCATTCATTTGTAGAATATTTTATATTACATTTGGGGGCTTCCCAGGTGGCTCAGTGGTGAATCCACCTGCCAACTCAGGAGGTGCATGAGAGGTGGGTTGATCCCTGGGTCTGGAAGATCCCCTGGAGGACGAAATGGCAGCCTGCTTAGTGGCTGAGCACACGTGCGTGCAGCATTACATTGTATGTTCATCCACAAACCACGCTGGTAGCATGGCTAATAACGTGTGATGCTCCACAAGCCCATGGAAAACTCTGTGTTTGAGAAGTGATTAAAGATGCTGATTTCACAACTCCTTTCGTTGAACCCTCTTTAGAGCAAGGGCAATTAAATAGAAGAAGCACCCAAAATGATCGAAGTTGAATATGAATTTTGTATGAATTATGGATGTGAACTGATCACGCATGTTCTCCGAGGTCCATTATAAAAGGAGGTTTTGTTCCTGGAATTTCATGATTGAGTTGTTATTCATGGATCAATTAATAAGTAAATACAGAAAGAAAAATGTGTCTGGATCGATGATGAGTTCCATGGGGTATCTGAAACAGGAGTTTTGATTAAACCCATAAGTGATTCTGAGGTCCATCATAAAGACACGTGGCTGAATTATTCCCTCTGTGGGACAAGAGTGCTTGGTTCCTTGTGTTTGTACTTTTGTGGTTTTGGGGGATGGATTGCATTTTTATTATAATATTGACCCATAGATAAAAAATGTATCAATAAATATAAAAAATATATCATGTACCTATTATTAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCAACCCCATGGGCAGTAGCCTGCTACAGGCTCCTCCATCCATGGGATTTTCTAGGCAAGAGTAGTGGAGTGGGTTGCCGTTTCCTTCTCCAGGGAATCTTCCTGACCCAGGGATCGAACCCAGGTCTCCCGCATTGTAGACAGACGCTTTACCGTCTGAGCCACTGGGGAGTCCTACCTATTATTAAGGAATGTAATAAAAAGTTAATGCATTTTCATTTCCTTAATACCACAACCACCCAGAAATGTAGCACCAACACGGAGCAAAAACTGTTATATACAAATGACCATATATATATATACTTCTTTCCAGAATAGTAAGATCCTTTACTGTTAATGTACAGTAAACAGTCTCAGTTAGATTTTAATAATAATCCATTTTGAGCTCTCTTTAGAAAAATAAGGGTATGATAATATTATTCCCTGAATAACACAATAAATCAGTACGTGAATGAATCCCTAAATCCACATAGTGGTGAACAGGTGAGATTGTCTCGTGAAAAAAATATGTCCAGTTCCATAGAAGTAAGTCCAATAAGGTGATCCTTGGCTCTTCCTGTGTAAGTAGCAGGTAAAGTAAGATATCTCTGATTGTAGTTTGTTGAGCAGTGAATTCGGTGGTATTCATATTATTTAACAGCCAAACTTAAGTAAATGAAAAAGTACCCTTCTTAGGAAAATGATGAGAATATGATATAAAGTAGAGTTTATGATTAATCTAGTCTTCCCTGCAAATATCAATTTTAAAAAAGCTAACTCTATTTTTAGAGTTTTTAATAATAGACTTTTTTTTTCCCTTTATAAAATGAACACCACACAGCTGACTTAATCAGCTTTAATGGTGAAGACCCTGGCTATTACTTCTGGGACTAAGGAGCTTAAAGACTGAAATAAGGAAATATCAATGTTGGTGTTCTCAGCTCCGATGGGGATTATTAATGGGATCTCACTGAATTATTTCAATAAAATAAATAGTCAAATAGCACATGAAATTAAGGAATGCCAATTATGAGCCCATGATTGGAATGTGTCATAAATTAACATTTATGATTAATTCAACTCAGCCCCACTAGGGATCATTCATTACTAAAGGGATGCAAGGAATTTCACATATTTTCAGAGCAGTATTATATTAACTTCCTACTTAATATTCTGGCCACATTTGCTAAATCCATTTCTTCATTGATTAAGATTCAGTTGTTAACTCTTTGAGGCTGGAGTGCTGTGGAGGATGGCAGATGTCTTTTTTGTCTGTTGTGGGCTAAGATCATAGCGCTGTTTCTGTTGATCACCAGCTTTAATATAATGACAAATTAAGTGGAAAAGGAGCAGGTGGGCACTGATCTCAAGGAAGGGACTGATAGGAAGTAAGTGTGCTGATTAACCCCTATGTGCTAAAACAGAGCCTTATTGTGAAAAGTGATTGAGTCTATTCATGCTACATTAACAGGGCCACGAAGAGATCTTGGTTGTGTTCAAGCCTTTGTTCTTAGTTTTATGTCAGTGCAGCTCATTGATTGTGTGATTATTATTCGTGAATCTGTGAACGAATGAATCAGTTCAGGAAGGGATAAGTGGATTAAGACTGCAGCATGCCAGGCTTCCCTGTCCATCACCTATAGATCCTAATCGGGGCTTGGTGGTGGACTTAATAATGTTTATTATATTATTCATAACTAAAAATTCAATACTGGATTAGTAAAAAATTGCATTTGAGCCAAAGTTTATGGTTATCTAGTTCTGCCTAACAATCATTAAAAAAAAAAAATCAAAATCTAGTCTAAATCAGCTTTTTTCCTCCCCAGAGTGAACACAGGACAGCTGATTTAATCACTTAATAAAGAATTTTTATCGTGAGCAAGCAGCATAAAGTCTAATATAAGTAAGTCCCTTGGTTCACATTCTTTGTTTGAATAGTCTATTCATGAGGGTCAGCTGAAGAATTCCAAAGTAATAATTATGTACTACATACATGAAATACATAAAACCCTTCCAGTATGGACCAGTGACAGGAATGTGTCACAAACCCCAAATGATGTTTAAGCTAAATCAGCACAACAGAGGTCACTTTAGAAGAGGATAGTAGTGATTTCATTTCGTATCATCTTCTCTTTTCTGTCACGGTTGCTTTCACCATCTGCATGTGGGTCGAGGGGCTGATAGCTTTGCCGGCAGCCTGGAGATGATTGCTGATGGCAGTTTCATTACGTTTTCATGGAACCATCTTTGACATACGAATGAATTAAATCAGAGAGGGCCACATAGGAAGGAATGCTGAATGTGGGTTTGATAGAAAGCAGGGATTTCTGAACCATCCACATGTGTAGCTTTCAGTTCCATTACAGAAGAAATGTTGTTTTATTAGCTCTATAGGGCGAGAGCCTAAAGTTTAAGAATCTGATTTTTTGGAATTTTGTGATTGTGTTTCATGTGTGTGTGTGTCTCAGAAAATTAATAAACAAAAACAAATTTCCTAGCAGGGATCAGTGATGAATCTCATGGGGTTTCTCAAGCAAGAACTGTGATTAAGCCCATCTGCAACTCTGAGGTCTATAACAGAGCGGCATCCCATTATTCTCTGTGTGGGAAATGAACCTACAACACCTTCTTCTCAGGCTTTTTGGTTTAGGGTGTGAATAGCTTTATTAAAATAAATATAACCTATGAATTAAAAATATGGCAGTGATTGAGGAATAAGAGATATATGCGTCCAACTTTGTAAGGTATGTAATGAAACATCGGTAATTCTGAAAACAGTTTTTCTAGATTCTTAATACTCAAGGCTCTTGTCATTTATGTAAGGAGCAGATGGTCATTTGCACACAAAACTGAATGTTTTTGTTTTGTGTGGAGGCATGTTGCCAATCAATCATTTTTCTAAGGAAAGAGAAATAATTTACATAAATAGTTGATTGAATAAACTGGGTAATTGGGAGGGAGAGCATGGAACAATGATGAGACTGTTTTATTCAACCACATTTGTGTTTAATTCAGTCTTTTTATGCAATTTTATGTTGCATACAAACAAACATTAAAAGAACCAGTTTGCTATTCTTTCGGCTGATGACATGAGGACAAATGTAAATATTATCTAAGGTCCTTATCCATGTGCGTGGGTCACAGATACTGAAGTATAATTATAAGTAATCAAATGTATACATCTGTATCTCAGTCACTTTTTCAAAAAGTCAGCCAATAGTACATCAGTGGAAGGCATGCAATTGGATGGAAAGATCCTAATTCATCGTGTTTTGCACAGCTGTTGTCCATGGGAAGATAAAACATTCCAGGCTTTTCCAATGGTGCACACAGACCTTTATAAATAATAGTGTTTCAGTTCTGTTTTGATGGTTACTTCAACTTTTTGGAATTCTTTTAGAAAAATAAAGGGATGGTCTTATTATTCCATGAGTAATTAAATAAAGGAATTAGTGAGTAAGTTAATAAATTTGTTAAGTAGGGTCAAGCTTGGACCCTCGGTGAGATTGTGCCATGAGTTGCCTCTCCCATGGATCCAGTTCCACACAGTTAAAGTTCAGTGAAAAAGATGATTTAGCCCTTCATGGGTAATATGTAGAGAGACATATTCTTAATAGTTATAGTTATTTTTCTGGTGTTTCCTGCCAGATTCAGTGGTATCCATCATATTTTATAAAATAAAAGATTGCACAAGTTAATATATATAAAGTAGAGCTCTTTCCAAATGTTGAAAATAGGATGCAAGTCAAGGATTATGGTTACCTAATTATGGATCATTTAAAGTGGATAATTGTAGATTGATTCTTTTTAAAATTTGCTTTTAACTGCCCAGAGCAAGCATTTTGCCAGATTTGATTATTCACTCATGGCAAAGATCTTGACTTTTACCTCTTAGATAAAGAGAGAAGAGATCAATGTAAGTAATAAAATTCATGTTCTGTTGGGGCCTTGGTCATGGGTATCTACTGAGATATTTTGAAGGAATAAATGTCTACATACATGAACAATTCTAAGGTGGACATGCATTGGTCAATGATTAAACTTTGTTAGGAATTTGAGTTATGATTAATCCATTTCAGCATGACTGAATTTATCAGGACAAAAGGATAAAAAGCATTTCACTCATTTTCTGAAAAGTTTCAGTTCACTTCAGTCCTTCAGTTGTGTTCGACTCTTTGAGAGCCCATGGACTGCATAAGGCCAGGCTTCCCTATCCATCACCGTCTCCCCAGCTTGCTCAAACTCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTTTGTTGTCCCCTTCTCCTCCTGACTTCAATCTTTCCCAGCATCAGGGTCTTCTCCAGTGAGTCAGCTCTTTGCATCAGGCGGCCAAAGTATTAGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAAAATTCTGGACTGATTTCCTTTAGAATTGACTGGTTTGATCTCCTTGCTGTCCAAGGGACTTTGAAGAATCTTAGTGTTCCACTTAATTTTTCTAACTCAAATTTAAATTTAATTTTTTTTTTCAATTTTAATTTTCATACCACAGGGGATATAAACACTGTACTGATATTGTTATAGACTATGAACCCATCAAGGAGGGGAATATACAAAAATGAAAAATTTTGCCTTTTTCTTAATCATGGTAGAAAATGAAAGTTCATTGTCCTGTCTTTAAAATATGGCTGCAAGAAGTCTAAGCATGGACCAATGGCTAATATGGAACTGATATGATACAAGGAAATGGATTAATTCATATTTTCAATGCTGGGCTGCATTGCACAAGGAGCTATTTCTCTAGCTCTGTGGGAAGTGAACTTTCACAGACATATTCATATCTTCAAGCATCTTGGCTTTATTTTCCTAATTCATGAACATTGTATTATTATCAGTGAATCAATGAATATGTCAAGAACAGCATATCAAACAAAGGCACAGAATACCAAGTCTGGATCGATGATGAGTATGCGTGGGGCATCTGAATACTATTTTGATTAAACCCAGTTTGCAACTCTGAGGTCCACTGTGTCTTTGGGAAATGTGCTTACAAAGGAAGTCAGAAATATTCAAAGACTGTGTTCTTGACCTTTTGTTGTTCATGAATATGGATGGTATTATTAAAAGTAAATCGATGCATGAATAAATGAAGTAGCAACAAAGAAGAGAGCTACCCCTTATCCAGCTGTGAAAGGAGCTTATGAACCAAGAATTATTGTTAATACATTTCTGAAAAGTTGAGTTCAGTAAGATAGACTAAGGGTGTTCCTCCTTTGAGAAAGTATAGATAGATATATGTGAATATCAGTGTTGTTCTTGGTGGTGAGTTTCTGGTCATATGTCTTATTTTTAAAATATTCATATAATTTATTATAATAATACTTAATATAATAGATACGATCAATAATAATATAACAAATCATGATAAACACAGTATAAAATATTTTGATAAATAGTAGTTTAATATAATCAATAGTGAAAAATAAGATACAAATGATTAGATAGTTATTGAAACATGGAAAATGTTTCCGCATGAGATTTGTGAATGTAAAATTATGAATCCTCTTGTGTTCACTGATATTTATTTTTAATCAAGTAGATGCATGTTGACGATTTTTGTGGTAAGCAGATGGATATAGATTTAGTGTCTCTCAGTATGTTTGTTAAGCGTCTTTAGGTTTCACCAGTATTGGTGCCATTATTACAAGAGAGTCAAAGCATGATTTCATATCTGTATTATTTAAAAGAGTAAAAGCCGTGGGCCAGTGAGGAGCATATGTAATATGCGAAGGAGCCCAGTTAATCTTGTTTTACTGCCTGGAAATCCACTTAAAAAAAAGATCCAAGCCCCTCCTTCTTCAGGGAAGAAGATATCTTGCTATTAACTTTTATATTCAAATACTCAAAAACAAAAATTTAGTTTCTTAGTAACACTATGTGGCCGGTGCCTGCCATTTTTAAAAACTGGAGTATAGTTGATTTATGAGGGCTTCCCTGATAGCTCAGTTGATACAGAATCTGCCTGCAATGCCGGAGACCCCGGTTTGACTCCTGGGTTGGGAAGATCCCCTGGAGAAGGGACAGGCTACCCACTCGAGTATTCTTGGGCTTCCCTTGTGGTTCAGCTGGTAAAGAATCCGCCTGCAATGCAGGAGACCTGGGTTCGATCCCTAGGCTGGGAAGATGCCCTGGAGAAGGGAAAGGCTACCCATGCCCGTATTCTGGCCTGGAGAATTTCATGGACTGTATAGACCTTGGGGTCTCAAAGAGTCGGACACAACTGAGCGACTTTCACTGTCACTTACAGTTGATTTACAATGCTGTTAGTTTCAAGTGTAGAGCAAAGAAAATTAATTTTATGTGTATATATTTCAGTTTGTTAAGATTCGTTTCCTA TCONS_00120087 TCONS_00120086 s 5' 436 TCONS_00120087 TCONS_00120086 s 5' 13733 EMBV3_12014 TCTCCATCACTCCAAACCTCCCTTTTTATTTCCTGAGCCTGGCTTGGACCTTGGCATTCC Gene GeneID:507677|AP1G1:XM_002694843:759_cdna Constitutive 0 NULL GeneID:507677 18 GENE AP1G1 NULL adaptor-related protein complex 1, gamma 1 subunit EMBV3_34632 GGGGACCACCCAAGAAAACGTGGGAACCAGATCTGGAAACACCTACCACATCTGAAGGCA Variant GeneID:515577|ACSBG1:NM_001024548:91_cdna 144^675 1 EMBV3_41264 GeneID:515577 21 GENE ACSBG1 BG1 MGC137418 acyl-CoA synthetase bubblegum family member 1 EMBV3_24033 GCTCCCAGGCGTATTCTCCCATAGCATGTGGCTCTGATTGCCGAGGAGACGAGCAGCAGG Variant GeneID:527162|TBC1D8:XM_002691148:175_cdna 373^491 1 EMBV3_20425 GeneID:527162 11 GENE TBC1D8 NULL TBC1 domain family, member 8 (with GRAM domain) EMBV3_39046 CACTAGACGCCCCCAGCTTTGATGTTTCTTACATCTTGATTTTGCTCATCCCTGACTGGG Gene GeneID:511602|COL4A5:XM_002699860:58_cdna UTR3_Alt 2 NULL GeneID:511602 X GENE COL4A5 NULL collagen, type IV, alpha 5 EMBV3_34231 CCTATACAGGAACAACCTCCTGCAGCAGTTCCTTGAGGCCTGGTACAACCAGAAGTTCCT Gene GeneID:282820|Has1:XM_002695251:226_cdna Constitutive 0 NULL GeneID:282820 18 GENE Has1 NULL hyaluronan synthase 1 EMBV3_29359 AAGATGCCCCAGGTGCTTGCTATTCCTTACCAGGCGATGTACGAAGGCGTACTGTGACTT Gene BVT0102_044572 + 1 EMBV3_38827 GK000026.2:35717575-35860596 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150937 TCONS_00150936 TCONS_00150934 TCONS_00150935 TCONS_00150938 TCONS_00150939 1 XLOC_091981 Coding TCONS_00150934 XLOC_091981 Coding Coding LOC530353 26:35670363-35719658 j TSS112939 3438 1 TCONS_00150934_3 268 0.0634089586969168 8 0.930417495029821 0.000101529943121872 0.000983522760371403 0.000541627333258757 0.000413994840402465 0.000726354851537074 0.000230100681603235 0.000924702139169581 0.000596611253463242 0.000883447684491424 0.000614791959250089 9.85718328732148e-06 3.13621018580434e-05 4.40310246999045e-05 0.000367509479477018 0.000269643724217492 0.000428256533933589 8.82607296927918e-05 0.0005546559275153 0.000492078641328995 0.000209826768500704 0.000334336368082849 0.000588449628673086 0.000825709524263652 1.62944028440611e-08 0.000695027151458879 0.000631996198781704 0.00018189107699978 3.02677042419832e-05 1.74027126627327e-05 1.74716482961797e-169 XM_003584106.2 TRUB1 PREDICTED: Bos taurus TruB pseudouridine (psi) synthase homolog 1 (E. coli) (TRUB1), mRNA. 0.0 5514 100.00 0.888888888888889 NM_139169.4 TRUB1 Homo sapiens TruB pseudouridine (psi) synthase family member 1 (TRUB1), mRNA. 0.0 2167 75.78 0.877254217568354 TCONS_00150934_3 sp|Q8WWH5|TRUB1_HUMAN TRUB1_HUMAN Probable tRNA pseudouridine synthase 1; 8e-175 491 95.28 0.944029850746269 1 coding 0 0 0 0 -0.472770319154865 0.153253393243424 0.0233471019161742 0.665394158192369 ATTCCAAGAGATGCGCTTTTTCCTCCAACCTGCTTTAGAGGAGCCCCCAGAAGCTGGAATGCCTTCTCCAGAATGGACCAAGAGGAAAAAGCAGACTTTGAAAATTGGGCATGGAGGGACTCTAGACAGTGCAGCCCGAGGAGTCCTGGTGGTTGGAATTGGAAGGGGAACAAAAATGTTGACCAGTATGTTATCAGGGTCCAAGAGATATGTTGCCATTGGGGAACTGGGGAAGGCTACCGACACGCTAGATTCTACAGGGAACGTAACAGAAGAGAAACCGTATGATAAAATAACACAAGAAGATATTGAAAGCATTCTACAGAAATTCACTGGGAATATAATGCAAGTACCTCCCCTCTATTCTGCATTAAAGAAAGATGGCCAGAGACTTTCAACTTTGATGAAGAGAGGTGAAGTAGTAGAAGCAAAGCCTGCCAGGCCAGTTACTGTATACAGTCTCTCCCTTCAGAAATTCCAGCCACCATTTTTCACACTAGATGTCGAATGTGGAGGAGGTTTTTATATCAGAAGCTTGGTCAGTGACATTGGCAAAGAACTCTCTTCCTGTGCCAATGTGCTAGAGCTGACGCGAACCAAACAGGGACCATTCACCCTGGAGGAGCATGCCCTGCCTGAAGACAAATGGACGATTGATGACATTGCACAGTCTCTCCAGCGGTGCTCATCTCTTCTCCCAGCAGAGCTGGCACTTAAAAAATCAAAACCTGAGGAGTCTAATGAGCAAGTTTTGAGCTGTGAGTGTATAACTCTGAATGAGACAAAGGGAGAAGACGATGTAATTAAGACACTTTAAGACTGGCTTGGGATTGTTATCATTTCCTCATTGACATTTGAATCCTGTGTGCAGAATGACAGGCTTCGTGCAAAAGACAAATGATACCTATGGGTTTTTTTTTATTTTTTTGCATGAAGAAAAATGTCCATCATTTATGGTTTCTATGGTGCACAATTTATCTGCTGTACATTATAAATAGCCCTGCAGTTGTTCATTTCTTGTTCTATAGAATATTGTCATGCTATTAGATCAGATTCAGGAAAAGCAACTTTCTGATTTTGATCTCTCTTAAAAGTCTTCTCCTATGAAAAAGTTGACCATATTTTCTAATCAGAGGGGAAAAACAATGAGCTACATGTTTCTTTGGTGTCATGAAGTGAATGTGTATTTGTTTCTTTGACTTTATTTTGGCTTCCTGGTGGCTCTGGTTATTGAAACTCCTTAACTATGTTTGAAAAAGCCATTATTTAACTCTTATGTTTTATAGAGTTTATGATTATTAAGAACATTTCTTTAATAATGTTATACTTATCTTGGTAATAGCTGTGTTTGTTTAGATCTTGGAAACTAATAAACTTTTATAACAAATATTTCTAAATGAACCAAATTATTGCTGCTACCACTAATGGAAGGTAAAGAGAAGACTAAATGTTTAATTAAATTCACCTCTACTCCACCATTAGCATAGGACAGCTCCTATGGCTTATGTTTTGGCAGCTATGAGATGTTTTCCTGGTAATCAATACAGTTGACCACCCTGTGCCAATATACTAAATAACCTAATTTTAAAAAATTAAGCTAAAGAATGTGTCTTCAATTAAAAACTTCTTTTCTTTATTTTTTAGTATTTATTTATACCTTTTTCTAGGGTATCAAGCCCCTGGTATTTTTTCAGTTTGCTTTTTCAAATGATGTTTACAAATGCTGAGGTTTGCCGTGTATTTGCAGTTAATCCCTTCTCTTTAAATGTTGAAAAACAGTTGTTCTCAAACATTTTCATTCAAGTGGCCTACTGACAGGTCCCTGTCCCTCTTCACCATAGTTTTGAAAACAGTCACATTCCAAAAGAATAAATTTCATGTATAATGAGTGCTTCATATTTTTGTTATGGGAAAGCAGTATATAATGCAGCCAGTCTGTTCAAATCCCACTGCATTTATTCAAATAAATATAGTTTCAAAGGGAAGAGTTGTTAAATTTTCATCAAATAAGAATTTTTAGATTTTTATGGATTGTCTTTCTTGCAAAGGTAGTTGTTTTGTAACCTCTAACCTCGAAATTTTAAATATGTTAAAGAAAAATGGTCGTATTTGTGGTGAACCTCATATAAACTCAGTCTAAAAAGTTACATGCTTCAGTAGAGCACTTTCAGCGTATTGTCAACATTTTAAAAACGGAACTTTCTTAAATGACACAGAAAATGATAAGGAAAAGAGCTAGTTATCATAATGCCTTAAATAAAACTTCAGACATACAAAGTTGTAAGCTGAGACTTTTACAGCTTTGCTTGTGTCCAGTGCCCTGCAGTTTGCGTAACCAAAGGTGGCGGTGGTTGCCTCTTCCTGTTGGAAAGGGACAAGTCACAGTACGCCTTCGTACATCGCCTGGTACGGAATAGCAAGCACCTGGGGCATCTTGGCTGTTTCTCAACTTAAATTTTGGCATGCATAGTTTGCTAATGGTAAAGAGCATAAATGTTTTGAAAAGACAAGTGACTTTCTGAAATGGTAATCGATCTTTTTCTTTTACTGAAAACACTGAAGAAAATTTTGCCAAATGGAAAAATTACCCGTAATCGTCACCACCTCGCTGAAGTGACTTCAGAACTTTCATTTTGTATTACTCTTTTTTTAACTATTTTTTATTTCATATTATTTGACTATTTGTATTTAGTTTTGATAATGATTATTTAATCTTTTTACTTTATTTAAACCATTTCCCTATTGCTAAATTCTTAAGTTTATTTTCAGTTTTATTAGGATAAGTTCCTGGAAGTGGAATTATTAAATGAAGTAATATAAACAGTTTTATGGTTCTTAGTAAGTTTGCCTTATTGCTTTCCCAGGGAGTTGTAACATTTTACAGTGTTACCATTTGAGTATATCAGTTCACCAGAAGTTTACAGCTTTGAGTGGGGGTTTTATATGTTATTGTTGCTAATTTAGTAAGTTAAAAGAGTTCAAAATTGCCAGTTTACCTCTGTGTGACTTTTTCATATACTTTGTCACTTGTATAAATAAATGTCTTAATGGTTTCTTTATACATTTGTGTGAGTTATTTGTGCAGTAAATACTTGGTAGAAGTATTTTCATGGTCTGTTGTCTTTTTTTATTTTAGTTTCATTTTTCATTTTTACTGACTAAATTTGCTAACTGATTTTAAGAATTCCTTTATAGTTGCCAGATTTATGAGTATGAATAGTTAAAATTTATTGAAAATTAAAAACATTTTTAACTTTCATAAGCAGCTGTAACTGATCAAGATGCTCTAAAAAGTTTGACTCGCCCATAAAACAAATTAGTTTTCTCCTGAGTCTGGTATTTATGTACCGATTGCTTCGTTTTTTTCACTTTAGTCAAAATATTAAATACCTGTGCCTATGTATTTCATGTCATAATAAAGTTGTCTTATTTGTAAGA EMBV3_00699 TCTTCACACGTGGTTCCCTAGAGATGTGGTTTGAATGTGTATTCTAGCTCTCCAAGAGGG Gene BVV0101_021609 + 0 NULL GK000022.2:6986736-7001969 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127857 TCONS_00125859 TCONS_00127862 TCONS_00127867 TCONS_00127864 TCONS_00125865 TCONS_00125860 TCONS_00127865 TCONS_00127856 TCONS_00127866 TCONS_00127861 TCONS_00127859 TCONS_00127863 TCONS_00125868 TCONS_00127860 TCONS_00127858 2 XLOC_077770 XLOC_077322 Coding TCONS_00125868 XLOC_077322 NonCoding NonCoding CMTM6 22:6961486-7001976 x TSS94569 1407 3 TCONS_00125868_1 52 0.312011371712864 3 0.965323915137445 0.00221261563178369 0.00364230406247937 0.00645510409168445 0.00131126132861793 0.000901925489646649 0.000374671334865987 0.00157670649111536 0.00232669642025539 0.00281239427387599 0.000623026048371867 1.66452358796024e-77 6.1944570989418e-84 0.00121806709985727 8.08388044802239e-05 0.000974932732260321 1.34023179633016e-236 0 1.25568171054867e-245 0.00654818192070242 0.00286355083462596 0.00318671854605767 0 0 4.24204773823712e-129 0.0010511030352134 0.00186308668646251 0.00372138266070137 6.26039626589741e-90 9.40354908729372e-125 0 XM_005221819.1 C21H15orf40 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf40 (C21H15orf40), transcript variant X1, mRNA. 3e-59 233 85.37 0.14498933901919 0 noncoding GAGAGAAGCAAGGTCGTTCTGGGAGTGGGAGGAAAATTTGCATGCTGTAGACAGCTGGGAGCAGTGTGGTAAGGAGAGTGGTTAACAGGGCTCAGGCATCGGTTACAAGGAGTTAGCAGTTTTCATCATCAGGTCTTTGGAATAAGAACCGGTGAGGACGAGGCTTCCTGTTCTCGCAAGACTTCGGCGACGAGGGAGGTTGTGGTGAAAAGGCCACGTCTCCGTCGGTAGCCCAGTTCGGCTCCTTTCTGCCTAATGCCCCCTGTGCACGTCCCGTGGCTGCCTTGCCCACCACGTCGATGGACATTGTTCCCCTGTGCTGCTGTTCTAAATAGTGCTGCACTGCTCCAGCAAAGCGCAGCCTCTGCTCCTTTCCTTGGACGAGGGGTATCTCCTCACCGCTGCCCCTCCTGACCTTGAACATGGAGTAGCTCGTCTAGGCCCTCCTGCGCCCGGGCAGCCAGAGAGTCAACCCAGAGGACAGAAACAGAAGGATGGGCAGGAAAACATGGAAAGAGCACGGGTCCCTGGCGACACTCCTCGGCCACTCAGTTTATCACCTGTGGAACTGAACCACCCAGCCTTCTCGTGAAATAAATTTTCCTTAGTGCTGAAGTGTTTTAGGCCTTCCCTCGTAGCTCAGTCAGTAAAGAATCAGCCTGCAATGCAGGAGACCTGGGTTCAGTCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAGGGCTATCCACTCCAGTATTCTGGCCTGGAGAATTCCACGGACTGTGTAGTCCATGGCGTCGCCAAGAGTCGGACACTCTTTTTGAGTGACTTTCACTTTCTAAGTGTTTTAAGACCCACCTAGTTAGATATTCTGCTCCTTGTAGTTGATTGTATGCTGATAAAATCATGCTCTTTATCAAAACACAGAGGTCTGAAGAATGTACAAATTCCAGTGAGTTCGTGATGACTCTAAAGATCTTGTTATTCTCATACGTCTGGAGGCAGGAATTTTGCAAACTACACGAATACCTGTAGCTTTACCAGAACCATCCTAGTTTTGCTTCACTTTCCCAGTCACTGAACAGCCTGAACGAGAATGAGCTTGTTTGGGGGACTGTTACCCATACTAGGAAACGGGACTGAGTCCAAATTTGCTGCTTTGGAAGTATTTGAAGGCCTTTAGTTCACAACATTCTTTTGTAACTCTTCACACGTGGTTCCCTAGAGATGTGGTTTGAATGTGTGTTCTAGCTCTCCAAGAGGGAGAGCCCACAGGTGGACATGGTTTTCCCTGCCCACGCCCTGGCAGATCCAAAGTCCAGTATTCTCTCCCAGGTTGTAAAACCAACTCCTAGAAGTCTGGAGAACACATTCATTTAAACACTATGCTTCTGTAATAAATAAACAACTACAAAGGTGTAAACAG TCONS_00127868 r 5' 0 TCONS_00125853 TCONS_00125857 TCONS_00125858 s 3' 19152 EMBV3_15288 TTCGACGTACTGATGATACTCCTGTGGTTCTTGTGGGAAACAAGTCTGACCTAAAGCAGC Gene GeneID:533646|RIT1:NM_001098078:177_cdna UTR3_Alt 2 NULL GeneID:533646 3 GENE RIT1 NULL Ras-like without CAAX 1 EMBV3_11611 TTTTTAGCTTCCACTTCCTTTCCCCTGCAAGAGGGGTCAAAACACGGGACCCTGGAATGC Gene GeneID:540063|FAM44B:NM_001076200:148_cdna Constitutive 0 NULL GeneID:540063 20 GENE FAM44B MGC140092 family with sequence similarity 44, member B EMBV3_26877 GTCCCTAGTGCTGGGGTAGTAAGGAAGAGCTACTTGGAACTCAGCCCACTTTCTTCTTCA Gene GeneID:618505|C20orf29:NM_001034811:1351_cdna Constitutive 0 NULL GeneID:618505 13 GENE C20orf29 MGC128915 chromosome 20 open reading frame 29 EMBV3_01009 TGGGCAATGGCCTCCCTCGCAGAAATTAAGCATGTATATTACGTGGGTGCTGATGTCAGT Variant GeneID:509460|THUMPD2:XM_002691293:389_cdna 896^967 2 EMBV3_18294 GeneID:509460 11 GENE THUMPD2 NULL THUMP domain containing 2 EMBV3_38644 AGTGAGGCGGACAGGCCACCATCTGTGACATCAACTGGGACTGGATTGCCTAAATAGTCA Gene BVV0102_056275 + 0 NULL GK000011.2:42981603-43071975 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027690 1 XLOC_015302 NonCoding TCONS_00027690 XLOC_015302 NonCoding NonCoding - 11:43013110-43051434 - TSS19563 1377 2 TCONS_00027690_3 61 0.552650689905592 2 0.964120762988284 0.000249144372657231 0.000343308939735626 0.000609464975464608 0.000173856556290669 1.81693243271974e-05 0.000533828800410599 0.00058271685988302 7.21170955668846e-05 0.000316536339434604 7.87595565742101e-06 0 1.00439775544174e-113 2.86273388515141e-06 8.26000425353334e-05 0 0 0 0 0.000879057126128952 0.00208824117444824 0.000336524435673258 0 0 0 0.00044516686449232 0.00036740498936822 0.000907681718026919 0 0 0 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 3e-54 217 83.41 0.151779230210603 0 noncoding 0 0 0 0 -0.420888074203181 0.098208072198461 0.00578621138419885 0.903475703233298 CTCTAGAGCACAGGTTCTTCCCATTAAGTGAGGCTGCATAGGGATCTCATCCGAGGGGAGCGGGCTGAGTTCTCGAAGGGCTGGCACAGCTGTGCTGCTCATGGTCGCAGAAGCCAGGGCCAGAGGCAGCGTCTCTGCACACAGCCCCCTGCCGGCATCTTGGACTGTGTCATGCCCAGTGCTTTTGCACATGGCCTGCTGAGCTGAGGCACTGCAGCCATTTCCTACCCGGAGCTCTGGTCTGAAGAGCCCACTGCAAGGCCTCTACACTCAACCCTCTTTGAGCAAGTGAAACTAGACAAAGAACAAAGGAAACCCAGTTTATGGATGCGAAAGAAAGGCTTGGAGCTGGCACAGAGAGTAAATGCTCGAAGAGGAGTCAACTCAGGGATGTCTGTCTTGGATGTCCGTGTTGCCTACCACGGTCTGCAGGCCAACTAGGGAGAAGGAACTTAAAGCAGAGCTGGTCTGGAGTGACTATTCGCCCCCGGGGGACAGCTGTTTTTTGAAATCTCCCACCCACATCATTGGCATCTTCTGAGGTGAGAGGAGTGAGGCGGACAGGCCACCATCTGTGACATCAACTGGGACTGGATTGCCTAAATAGTCACAATACCCGATATTTTAAAGAGCTTTCTATTTCTCCAGGCTGTTACTGTAGACTCACTCAAAAACCCTGGTTGGAAGCAAAGGCCATCGTTCTTGCCTGCATTATGGAGATGCTGAAAAGAACATTCTGAGCAGGGTTCAGTTCTTTCACATTCTTGAGGCTCAGTCAGGAGTTGGATGCTGGGGCCTGACTCCAGACGCTTATAGTCGCCCAGCTGAGTGAGCTTGGACAAGTCCTGCAGTCTCTCCAAGTCTCAAATTTGTTGTTTAGTTGCTAAGTCATGTCTGACTCTTTAGCTACTGCATGGACTGTAGCCCATCAAGCTCCTTTGTCTGTGGGATTTCTCAGGCAAGACTAATGGAGTGGGTTGCCATTTCCTTCTTCAGAGGATCTTCCTGACCCAGGGATTGAACCTGAGTCTCCTGTATTGCAGGCAGATTCTTTACTGATGAGCCACTGGAGAAGCCCAAGCCTCAAGAGGAACATGTATAAAACAGAGACAATCATTAGCTCCTATTGCATAGGCCTGTTGTGAGGCATAAATGAGATAATATATGTCAAGTGCTTAGCCCTGTTTTGAAATGTGATGAAACTCCCTACACGCTGACTACTGTATTGTTTTTGTCTTCTTATTAATCAAATCCAGCCTAGAATTCTTCCCCACAGTTCAGTTTATCATTGTTTAGACTTAGCCATGTTTGGAATGAGTTGTTGTTGTCAGTAGCTAAATCATGTCTGACTCTTTGTGACCTCATGGACTGCAGCAC TCONS_00027694 TCONS_00027695 s 3' 57809 TCONS_00027694 TCONS_00027695 s 3' 20542 EMBV3_43375 GTGTCTGGTAAACACGAAGAAAAGCAGCAAGAGGGGGGCATCGTCTCCAAGAACTTCACA Gene GeneID:539524|HSPB8:NM_001014955:249_cdna UTR3_Alt 2 NULL GeneID:539524 17 GENE HSPB8 NULL heat shock 22kDa protein 8 EMBV3_25660 AACATGTATTCCCATGTTAGGTGACACCCCTCCTCCCACTCTCCATGCTGCGATCTTGAG Gene GeneID:540350|MYCL1:XM_002686460:490_cdna Constitutive 1 NULL GeneID:540350 3 GENE MYCL1 NULL v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) EMBV3_18609 AGAGAAGTTGCTGACTCGTATGCACAGAATGCCAAGGTGATTGAAAAGCAGCTGGAGCGC Gene GeneID:504687|CXorf56:NM_001034219:20_cdna Constitutive 0 NULL GeneID:504687 X GENE CXorf56 MGC126998 chromosome X open reading frame 56 ortholog EMBV3_17142 TGGATGGGGAACAAGGCCCATGCCATACCCTGTGGGAATCTGGGGTAACACTCATCAATA Gene GeneID:788708|LOC788708:XM_002697351:319_cdna Constitutive 0 NULL GeneID:788708 23 GENE LOC788708 NULL similar to STG protein EMBV3_00280 TGGTTGCACATCCTGTTTTACTTCTGCCTGCTCTCTTCTCCGACCTTCTCTGCTTTGAGG Gene GeneID:506295|MYADM:NM_001075252:145_cdna Constitutive 0 NULL GeneID:506295 18 GENE MYADM MGC140812 myeloid-associated differentiation marker EMBV3_16348 ACCTGGGGGATGCGAACGAGCGTGCAAGCGTAACGAGTTTGGAGCCATATGGCAGTCCAG Variant GeneID:513835|RBBP9:NM_001083424:46_cdna 346^533 1 EMBV3_12408 GeneID:513835 13 GENE RBBP9 MGC143365 retinoblastoma binding protein 9 EMBV3_23020 GGCACAAATGACTATTGGACATGCTCAACCTAGTTACTCTTAGAAAAAAACACATGCCAG Gene GeneID:539092|OXR1:NM_001076148:44_cdna Constitutive 0 NULL GeneID:539092 14 GENE OXR1 MGC152096 oxidation resistance 1 EMBV3_11042 TTTGGGTCAGCCCCATGACGGTTTGCAATTCTGGCCAACGTCCCTCAATGCAGAGCAATT Gene GeneID:533774|SLC35E1:XM_002688579:284_cdna Constitutive 0 NULL GeneID:533774 7 GENE SLC35E1 NULL solute carrier family 35, member E1 EMBV3_41191 TCATCCCGGAGACATCCTCCGACCTTCCACACTTAAGCAGAAGAACAAACTGCAACCCAG Gene GeneID:508384|GATAD2A:NM_001103090:35_cdna Constitutive 1 NULL GeneID:508384 7 GENE GATAD2A MGC165927 GATA zinc finger domain containing 2A EMBV3_28218 GACTGCCGAGCACCCTCACACGCCTCCTGAGAGATAAAGAAAGTGTTTCCCCTCATTTCT Gene GeneID:100337161|LOC100337161:XM_002694045:124_cdna Constitutive 0 NULL GeneID:100337161 16 GENE LOC100337161 NULL kinesin family member 1B-like EMBV3_29739 GCTCACTTCATATGTAACAGGTGCCCTTACGTTGTGCTGTATCCTGTGCTTTTTCTGTGG Gene GeneID:281080|CLTC:NM_174023:9_cdna Constitutive 0 NULL GeneID:281080 19 GENE CLTC NULL clathrin, heavy chain (Hc) EMBV3_06088 CCAAGACCTTCAAGGGCCGAGGCATCACAGATCCAGAGCAAGAAGAAGATCCTGGCGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08889 TTAGCACGCATTCCTGGAATGTGTATTATATGCTAGGCCAATGGTAGGTAGATCTTGTAC Gene GeneID:509952|DECR1:NM_001075423:27_cdna Constitutive 1 NULL GeneID:509952 14 GENE DECR1 MGC139401 2,4-dienoyl CoA reductase 1, mitochondrial EMBV3_39110 CGTGAACTCTGTGGACTCCTCTGGGAAAACACCTCTCATGATGGCTGCAGAAAACGGACA Gene GeneID:529062|ANKRD28:XM_002685177:37_cdna UTR3_Alt 2 NULL GeneID:529062 1 GENE ANKRD28 NULL ankyrin repeat domain 28 EMBV3_33210 GTGTGTGTGGTGACAACCTCAAGTATAGCACCAAGTTCCTGAACAACTTTCTGGGGCCCA Gene GeneID:541243|WNT9B:XM_002696084:39_cdna Constitutive 0 NULL GeneID:541243 19 GENE WNT9B NULL wingless-type MMTV integration site family, member 9B EMBV3_19817 CTCTACAACTATGCCCCTTAGAGCAGGGATACCCATAATTTTGTGTTGGCACCATGGAGG Gene GeneID:509935|PCDH9:XM_002691876:2_cdna Constitutive 0 NULL GeneID:509935 12 GENE PCDH9 NULL protocadherin 9 EMBV3_32418 CCAGCTGGATTTTTCTTAGGACAAAAATGGAAAATGCGTAGGGCCTGGAAAGGTTGGATT Gene BVV0102_250778 + 0 NULL GK000010.2:85504549-85511320 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40806 GAGGCGATGAAGTGACTGGAGTTAGGGACGGCTGTGAACTAAACCAGGAGCGGCCGACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24178 TCCTTCAGGGACAGGTTCCCAGACTATGTGAGGAGGGAATCCAAGGCCAGAGAAGGGCAA Gene GeneID:509029|LOC509029:XM_002696782:486_cdna Constitutive 0 NULL GeneID:509029 21 GENE LOC509029 NULL hypothetical LOC509029 EMBV3_13872 CTTCTACGTGACCACCAACCCACAGGAGCTGACCCTGCAGATGAACCTCCTGGAGCTCAT Gene GeneID:100126445|DGCR6L:NM_001110446:5_cdna Constitutive 1 NULL GeneID:100126445 17 GENE DGCR6L MGC134025 DiGeorge syndrome critical region gene 6-like EMBV3_35687 GGGACCCCAGGTGAGCAAGTGGGGACGATCAGGGTTTTGTGGATCTTCGAAATTGAATTT Gene GeneID:530411|UHRF1:NM_001103098:48_cdna Constitutive 0 NULL GeneID:530411 7 GENE UHRF1 MGC166355 ubiquitin-like with PHD and ring finger domains 1 EMBV3_28864 GCAGGTGCGCGATGTAACTGGAAGCCAGCCGGAGCGTGTCCAGCTTCGAAAGCTTGGTAT Gene GeneID:100297084|LOC100297084:XM_002692701:104_cdna Constitutive 0 NULL GeneID:100297084 14 GENE LOC100297084 NULL hypothetical protein LOC100297084 EMBV3_24498 AAGCATTGGCTTTCCTTGTTCTCCGGCTTGTGGATGGCAGTTCATGGGACACTGTGACTT Gene BVV0102_154078 + 0 NULL GK000001.2:106136178-106700431 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004745 TCONS_00004748 TCONS_00004747 TCONS_00004746 TCONS_00004744 1 XLOC_001099 NonCoding TCONS_00004748 XLOC_001099 NonCoding NonCoding - 1:106674635-106684522 - TSS2353 593 2 TCONS_00004748_2 52 0.344013490725126 3 0.940319643940927 0.000379419952451934 0.000294455873056555 0.000415964224956848 0.000815675301392089 0.000270835514422921 0.000147980650941161 0.000710786735951149 7.48664096485639e-05 0.000216654436950013 1.01097853715536e-05 0 2.94239414598506e-32 0.000291258769047458 7.93231521427054e-06 0.000308978861632884 0 0 0 0.000347632251443066 0.000285938989985591 5.46842427765573e-05 0 0 0 1.00771427368196e-10 0.000384573520612533 0.000272022410618136 0 0 0 XR_228285.1 LOC101907759 PREDICTED: Bos taurus uncharacterized LOC101907759 (LOC101907759), 5e-08 62.6 77.91 0.141652613827993 0 noncoding 1 0 0 0 -0.993635457124087 0.0582792993064964 -0.06484666476193 0.206691108903524 GTTGAGAGGCAGCATGGGCTCCAGCCATGAGAAGACCAGGAGCTTGTCCTGTTTCTCCGCTCTTGTCTTGGTTCTTTTCTCTGCATTGTTTTTATTCTCAGGCTGGCTTCTCCCCTTGTGTTAATATGATTGCCAGCAATAATCCAAGGAGGCATGCTTCCTCGGTCATGTCCAGAAGAAAATAGCTCTTCTTCAATATCTTTCAGACTTGTACTGAACTAAAGCATTGGCTTTCCTTGTTCTCCGGCTTGTGGATGGCAGTTCATGGGACACTGTGACTTCCATAATCACCCAAAGTGATACAACTAAGGATTGTTGGAAGATGGCTGGAGTCAGACTTTACTGGAAACATATTCCTTTTCAAAAGGATTTTTCCAGTTCACAGTGCCCTTGGCAGCACCTTCATCATACTTTCATCACAGCCTTGGCAGCATGCTTTGACCACTAATGAAGATGAACATTGCTATTCCATAACTTTTTTCTGAAAATTTTGTTTATATTCTTTTTATAAGTTTTCTTAGACATTTAAACATGCTCTTCAAAAATTAAAGGTATTAACTCTTGATCACATCTGTTACCTGTTTCCCTTTTTC TCONS_00004749 s 3' 24190 TCONS_00004749 s 3' 14605 EMBV3_11059 TCCTATATGAAAAAGAACACATCTGCTGCCTGGAAGAGTGGAGCAGCCCCGTGCACCAGA Gene GeneID:100337008|LOC100337008:XM_002684641:20_cdna Constitutive 0 NULL GeneID:100337008 1 GENE LOC100337008 NULL neuropeptide FF receptor 2-like EMBV3_35725 CTCTATGGCTGGTGGGAGTTTTGGGATTCTGCGCAACGATGAACGGGCTTTGCTGGAAAA Gene GeneID:100295005|LOC100295005:XM_002689691:131_cdna Constitutive 0 NULL GeneID:100295005 8 GENE LOC100295005 NULL similar to nuclear pore membrane protein 121 EMBV3_19317 TTTTGACGAAGTGCAGCCCACAGCCAATGGGAGGGGATTAGATAAGGGCAGGTATCACTG Gene BVV0101_003229 - 1 EMBV3_10840 GK000020.2:10062675-10071639 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10592 TGAGCAATGTGGGATCACAGCCGATATCAACCGGCGACAGGGACTGAACACCACTTATGA Gene GeneID:786328|LOC786328:XM_002700177:53_cdna Constitutive 0 NULL GeneID:786328 X GENE LOC786328 NULL similar to Gag EMBV3_09545 TAAACGATGCCCTTGATGGTGGAGGAAATGAAGAATCGCCAGGCGTGATCCCGGGCATCG Variant GeneID:509230|CD99:XM_002700435:20_cdna 378^446 2 EMBV3_04437 GeneID:509230 X GENE CD99 NULL CD99 molecule EMBV3_05386 AGATGAAGCTGGATTACATCCTGGGCCTGAAGATTGAGGATTTCTTGGAGAGACGCCTGC Gene GeneID:533892|RPS9:NM_001101152:31_cdna Constitutive 1 NULL GeneID:533892 18 GENE RPS9 NULL ribosomal protein S9 EMBV3_34661 CCTCTGATTGGGGTCTTCTTCACGGTCTGCATGGCCTTCTTGGTTCTTAGCTTATCCAAG Gene GeneID:541055|HTR3B:XM_002693016:242_cdna Constitutive 0 NULL GeneID:541055 15 GENE HTR3B NULL 5-hydroxytryptamine (serotonin) receptor 3B EMBV3_15521 GAGAACGACTCCTGGGACACCAGGATGTGTTTTGAGGAGTTCCCATCATTTTTCTGATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34896 GAGGGGGCCTTCTCTGCTCTCATCTTTCAGGTTTTACTCCTGGCACTGGCTGTGATACTT Gene GeneID:510413|LOC510413:XM_002707792:19_cdna Constitutive 0 NULL GeneID:510413 28 GENE LOC510413 NULL similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) EMBV3_02422 CAAACCCTCATTTCTCCTTTGCTGTTTTCTCTGTGAGTTATGGGAAGAACTTGTCTTCGC Gene GeneID:788858|LIX1L:NM_001082475:10_cdna Constitutive 1 NULL GeneID:788858 3 GENE LIX1L NULL Lix1 homolog (mouse)-like EMBV3_06806 GCTATTGAAGCCCTCTAGCTGTTTCTGCCCTAAGTAATCTTTGTAGCTGTCTCACAGGAG Gene GeneID:538733|ALKBH1:NM_001102220:120_cdna UTR3_Alt 2 NULL GeneID:538733 10 GENE ALKBH1 MGC165976 alkB, alkylation repair homolog 1 (E. coli) EMBV3_03386 TCTATATACCACAGTCAACCCTGTGTCCCTACTGCTCAGATTAGTACTGGTGCACAGTCC Gene BVV0102_443863 + 0 NULL GK000004.2:54404208-54866420 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08449 CAATCCATCCTGGACCTGTTAGAAATGGGTTGCCAGAGTTCCGCATTTAGACTCAAGAAA Gene BVV0102_008128 + 1 EMBV3_12142 GK000009.2:51164679-51485364 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235522 TCONS_00235531 TCONS_00235533 TCONS_00235523 TCONS_00235529 TCONS_00235532 TCONS_00235525 TCONS_00235524 TCONS_00235530 TCONS_00235528 1 XLOC_144242 Coding TCONS_00235533 XLOC_144242 Coding Coding C9H6orf168 9:51139495-51172693 j TSS176512 8969 1 TCONS_00235533_1 129 0.0789385661723715 3 0.72991535379703 1.26531040656815e-07 2.35639338717248e-07 0.000143153522121987 0.000159631003544807 0.000393528542728066 2.65740773470543e-05 3.02189804700131e-13 0.00010501634742636 2.38662548907788e-24 2.34552554813405e-08 1.96869977035875e-13 9.69717592461596e-13 3.27319764741048e-11 1.33073409899542e-06 0.000118163345043829 4.93620809485459e-09 0.00244305574229794 0.00123933252066371 5.0880331718535e-05 8.49378773208045e-05 2.27354881707073e-12 2.41953984008636e-10 0.000131459972816854 1.83288466400153e-09 0.000247119342547371 1.66941609950312e-15 0.000247964758775782 5.38578920973174e-13 1.42280447873775e-10 2.78356782748233e-11 XM_002690169.2 FAXC PREDICTED: Bos taurus failed axon connections homolog (Drosophila) (FAXC), mRNA. 0.0 3029 100.00 0.187088861634519 NM_032511.2 FAXC Homo sapiens failed axon connections homolog (Drosophila) (FAXC), 0.0 2533 75.47 0.397145724160999 TCONS_00235533_1 sp|Q5TGI0|FAXC_HUMAN FAXC_HUMAN Failed axon connections homolog; 9e-90 270 99.22 0.992248062015504 1 coding 0 0 0 0 0.562889847340371 0.287985606264612 0.0699035771977667 0.162618530686008 GGTGCTCGGCACTGGACGGTGCAGGTGACAAGAAGTACATCATGGGGCCCAAGCTCTCCACCCTCGATGCTACTGTCTTTGGACACTTGGCCCAGGCAATGTGGACCTTACCTGGGACGAGACCTGAACGGCTGATTAAAGGTGAGCTGATCAATCTCGCTATGTACTGTGAGAGGATAAGGAGAAAATTCTGGCCTGAGTGGCACCATGATGATGACAACACCATCTATGAGTCAGAGGAGAGCAGTGACGGGAGCAAAACACACACACCCCTGCTGGATTTCAGCTTTTACTCAAGGACAGAGACCTTTGAAGACGAGGGAGCAGAGAACAGTTTTTCCAGAACCCCAGACACAGATTTCACTGGACACTCGCTCTTTGACTCTGATGTGGACATGGATGACTACACAGACCATGAACAGTGCAAGTGATGGGCAGCCTCGCTGACCCTCCTCTGTTGGAGCTGCCACTCCCTGGGGTCAGTCCAGTTTCCCAGGCAGAAATCCCATTGAGCTGGGAGGAGATCTTCGTGCTTGGCACAGTTCTCACAAGCTAACTGGAGTAGAGCAGCCTTATTTCTTTTTTGTACAAACAAGACACAGAACCATTCCAATGGCTCCATTTAAAACAAAGAGGCAAAAAAATAAAAAAGTCAGCATGGTTCCTGAAATCCATTTTTGTTTTCATTAGAAAACTAACATTGTGTGGTAGAGCAGTGCAAGTGCGGGTTGTCCACAGACCGCTTATACGTTGATCCCCTGCAACCTGAGGGTTTAGGTGTGAGATGGATCCTTGAACATCCTTCATCCAGTAGGATTCAAAGTCATGAGTGATGTCATCAGAAGGAATGCAGGAGATAAATGTTCTTTGGTGGCCACTTGTATTTTCTGTGTGTATATTGTATGTTGAAATATAAGTCAAATAAAACCCATAGATATTCAGTGAACACCTACTATGTGCAGAGCACTGTGCTAGGTGCTAGCCAGTACTGGTTTTATCCTAAGCCCTGCCAGTGACTAGCTGTGTGATTCTGGGCAAGTCCCTTAATTCTTGTGTGCCTCATTTCCCCCACCGGTGAAGTGGGGGACAATAGTCTCCACCTACCTACCTCACAGGGGTGTTGTGAGGATTCATGTGGTAACATTTGGCGCTTTCAACCTCTAGGAAGAGGTGTGACATAAACACATTTTATTCTTTAATGTGCTTCGTGCGTGTGAAGATCGGCGGGCGGAGGAATTCCACATTCAGGCAACAGCAGCCACGGTCACTCGCCCAAGCCGAGCTGATGGAATACACACCAAGGCACAGTTAGGACGCGCTCATCATCCTCTTTGTGATCTTGCTTGAGTTGAAACCTTTCGTTGAAAGAACCTTGGAAATATTTTTACAGATCATCAACAGCTACAAACAGTCTTCAACTCTACTGTATATTTGCAGAGAAGTCTCTTTTGTTGTCTGAACTCACACTGGAAAGCTGTCCTTTGTTGATTCCGGAGTGTTAAGTTGCCTATGTTTGGATTACCTGGAGGGTATAAAGCTCAGGAATAAGATCTATTTAATAGAAGTGAAGGGGAAAGGATTTGATTGATTTTTTTTTAAGCAGAAGCTCGCCAACTTGTAATGTCTTTTTTGAAAACAAACTTTGCAAGATGTACTGAAAAGATGAAGCAGGAAGAAGATCGTTGTAAATGGTAGCAAAGCACTTTGTGCCGTGTAGACTCTATGCAGTTTTTATTAATGCAACTTTTCTGGTCTTCTCGGCCCTTGTCCAGTGAGGGGAAGGCAATGCTGAGGAGAATCTTAATGTTTCTTAAGGATGTCCCCTCCCCTTCCTGTCCTCTCTTTCCCTCTCCAGTGTTGACTAAGGCACTCTATCTCTGAAGACATGGTTTTGGTTGACTTAGAACATTTTCCAGTGAAATATGGGGTGAAGATCCTAGGGCGATGGCTGTGGATCTGGGCTTCTGACCACAACTGCCTGGGGAAGGGCTATTCCTAATGGGGTTAAAAAGGAACTTCTTAAAAGACAGCAACTTCTGAGAAGTTCATATACTTTATTTGAAAAAGACTGAATATAGTTTTGGCAAAACAGTCCTAGAATGCTGTGGATTCACAAAGATGTAATGGGAGAGAGTTTTTGAGGTGATTTACCGTTTAAGCAATGTATAACTGGGAAGAAGTGCTGAAACACTCTAAGCTAAAGATTTTTATTCCACATAAAACTCATTTGTTAGTATCTTATCAAACCCTTCATCTTTGAGGGGACTGTTTGCTGCCTAACGAGAATGTGTTGGAAGATATATGAATGGATAAGCCTATCTTGTTTCCAGTATCATTTCCAGGATTACCCACCTCTTATCTCTTTCACAAATGCATTCCAAGACCAACTGGTGGTAGTTCTGTGTGACAGGGAAAGTCCTGGCCTGAAAATGTGAATGGAGTCGACAGACTCTGGACCTAGCTCTGCTAAGACTGAGTTGCCCTTTCCCCATCTTCAGCGGAAAAGAGTTGTGTTTGAAATTTTGTCTATAATTTATTCTTCCTGTATAGCACAAAGTATACTGTATCTTCATGACAAGAAGGTTTAAGTTATGAGTATGTGGGGTCACATATTTTTTATTGTGTATTACTTGGAGGGCACATCCATGGAGAACCAATATTAAATATGTGAAACCTTCATTCATTCTCTCCAGGTGCCTCCCACGGGGGCTGAGTCCTGAGTACTGCCCGACCCCTCATGTTTGGGTACTCAGCATTTTGTAGGTATAACTTGATTAGGAACCCCAGAATATACCCAGGCTTTACTTTCCCAAAGTGGGTTATGGAAAAATAATGACTAAGACAAAACCCACAGTGATGTGGGTGACTTACGCAGTCTTGATTAGGTGGGCTTTAATTTTATATGTTTCATTCTTAGGCTGCCCAGATTGAACTGTTCTCCTATTTGATGAACAGGTGCTACTTATAAGAAAAATAACAAGAAATTAGGGGATGTTTTGGTCATCTGACTCTCTTGTTCAAGTTCTGTATTTCTTTTTTATTGGAAGATAACTTAAGGAAGTGTGATCTTTAATGCTAAGAGATGCTTTTGGATGGCCAGAAGACCTGGGGGCTACCTGTTCTTTTTAACCTTTCATTGTAAAAATTAAATTCTGTCTTTTTCTCTACTTCCCTTTGCCCCACCCCACCCTCATCTCCACTTGTCTGGATGAAGGAGCAGCCGAATTATACTTTGCCTTGCATATGTCAGAGTAGATAACAAGGATGATTTAAATTTATGCAGAGGTAAACTGTCTTGCCAGAGGTTCCCATTTTTTTATAACATCATGATTTGTGAATATTAATGCTACCAAAGTGATGGGCTGCCCAACTGACTGATCACAGACTTAGAACAAATGGACTTGAACTAGAATTAGAACCAGACTTTGAACTAGAACATGAGCCCTACTTGTGTGTACTGAGGTATGAGGATATGTGTTTGTGAAACAACTAGGGTTCAAGGAAAGGAGGTGTTAAGGATTGTAGCTGTGGGAGTCTTGCCCAGATTACTCGAGAGAAAGTATAGACTCATAGACATGGATAGCTGGGTGGTGGATTTGCTCTGGAAAGCCATATTTATTTGAAGGGCAGGCCCAGAACTGAGGTCTTTCACCTTGCCTTACAGAGTTGTTGCCATTACATCACCTTGACTTGGATTATTTTTAAAACCACCTCCCTGAGCACTCACTCCATGTTTGTAGAACGAGCTCATCCCAGCCTCTCAGAGAGTGCTCGAAATCTTTCAGTTTTGTCCCCTGTATCTCTTTACCCTGGTCAGTTCAAGGGATCTTTGTTCGGTATCTACTCTGTACAAAGTGCTGCTTGTGCTCTGTGAATGTCACCAAGATGGACATTTAAGTTACCAAGACCCTTGTTCTTGGATTAGATCTTTTAAGGAATCCGTGCCCATGTGATCTCTCACTAGGTATTTAGTTACTCACTGATGAGTTGATAGCCCCTTACCCTAAGCCTGGCCCTGGAATCCACACTGGATATAGAGTGGTGAACAGATGTGGCGTCCTGGTTTTAGGTATTCTCTTTTGCCTAAGCTTCTGTGATAATCTCTTTTACATGCATCGCCACTTCCCTGATCCATTCTACCCATCATCTTAGATTAATATTTCTCAAAACCCCCATAAGGCACTGTATTGCTCTAGGATGAGGTATTCCTTTGGGCCTGGTGTCCACAATTTTTATTCATCTTGTTTGCCAGGGCTCCTCCATGTAAGCCATCCAGTGGATCCAGGCTGGTCCATTTGCTGTTGCCTAGACATGCCTCACGTGCTCTGCTCTGTGCCTCCATTCATGGCAGCTCCTCTCCTGAAATGCCTGCCCTTCCTCTCCTTTGGCTCACACACCTCACATGGCCCAACCTTGTCAATTCTGCAGGACGAGGTCTCAGCTTATTGTAACTCCCACTTCCTCTAGAAACACAGCTCCCATCACTTCCTTCCCTGAAGGTTGCATAGGAGAAGGGATTCCCAGGAAGAGGGTCATACTCTAGAAAGATATTGGGCTTCCTTGGTGGCTCAGCAGTAAAGAGTCTTCCTACAATGCAGGAGACCCAGGAGATGTGGATTCAATCCCTGGCTTGGGAAAATCCCCTGGAGGAGGAAATGGCAGCCTACTCCAGTATTGTTGCTGGGAAAGTCACATGGACAGAGGAACCTGGTGGGCTAGAGTCCATGAGTTTGCACAGAGTTGGATACGACTGAGCACACACACAGTGGTTTTTTAATTTTTGTGTCTCCATTGATAATCTAATGCAAGTCCTATGCCCTAGTCCCAGAAAAATATGGAGATATATGAAATTTTGCATGTAAGTTCAGGAGATGTAGAAATGTCTTGAAACTACCTGTGGATTCCTTAGAGGGTTCATGGACCACAGCTGAAGAAACCTTGTTTGAAAAACAGCCTTTAAAATTCACAGCCTTTAAAATTCAGTGTTCATTCTTGCTTGATTTTATCCCAGCCAGACAGGAGATAAATTAGAATGGGAGGTGCAAGCACAAGTAATCTGTATCGTTATCCACATGGAGAGTGCTCTGTGACAGGGAAGGAAGAAGAGGTGCTTCACACTGATTGAGAAAATATCCTTCTTCTGACAAGTTTGGCATTTTGAAAGTGAAAGGATTTTGTTGTCATCATCATTGTCATCTACCTTCTGACCACCCAAAATGTTGATTTTGCAAAATCAGTTCAGGGACAGGGGCTTCACTTCAGCCCTGAAACGCACCACTTCTGCATGGATAAGCTGACTGGTCTGTGGCTTAAGGTACTAGAGAAGAAGCTGGATTTTTCCTTATAGGAATAAGTTCTGCACAATCAGGTTTTTCTGCATTAATTAATTAATTGAACAATTGTTGAGTGTATTTTCAATAAAAGGATGGTGCCTTTTGTTGATAGGAAACAACTCAGGCTTTTCCTCCTCTTCGTTTTCTTTCCCTTCTCCTTCTTCATCTCCCCCATCCTCTCCCTCTTTCCTCTCCTCCTCTTCCTCTTTTTTTTTTTTTGTTAACGGGTGAGACTATTTTCATTGCTCTTGGCTATTACCCAGGATCCTTTGTTCTCCTGTCTATGCAGTGCTATTTAAGAAGAACAAGGACTGATGAAAGTACATTCAATGACAAATATTTCTTGAGTCTAAATGCGGAACTCTGGCAACCCATTTCTAACAGGTCCAGGATCGATTGCCTGTGACTGTGGCATGCTTGACTTTTATTCATTTACTTTTGATGGTCTGGATGCAATTTGCAAAGTTCAAAAGGACCCCTTGGTGTGTGAGCAGGAGGCTCCTCTGGATGGCAGAACGCTTGCTAGTGCCAGGAGTAAATGCAAATGGATGTGGGATTTTTTTCATTTTTTTAGGTTTTTAGTCCCTGACTTTAAAGAATATCTTAAAGGTAATTAAGGCACTTAATCTTTAAGGTAACTGGAACCAGCAACACATTGGCCTTGCCCCTTAAAGGTTACAGAGAATACTGAAAACATTCTCTGTAAAAGGAAGCAACTCACTGTTTGGGGGCTGACAGTATGACCTCCTTAACCATTCTGGCTCTGGCCAAACAGGGACTTTGTCCCCAGACCAAAGCTCTCTGAAACTTCTGCTGCTGGCTAGACCATTTGGATGCTCAAATGTCAGGTGGATTATTGCCCCTAATTATCAAATTTGTAGACAAATAAAGGGGACCATTGCAATAATAAAACAGCTTATGAATATGGTCCAGCCAGCACCAATACTCTTGACCATTTCCATGGGGAAACAAGTTATCTAGAACCAAACATTGGTACAGTACTTAGGTGTTCCATACACAAATAATTTCAGCAATTAACTTGATTACTGTTATAATGTTCTTCTTAAATATTTTTCAGCTGCTCTTGTCCCTAATTACAGCTTTAAATATTTTGAAACAATTCACTAGCTATAGAGTGATATATATTTATGATGCTATTTCATTTTATGAAAAGTAGTATTACTAAAAGTGACTAATTCACCTCCCATCCCCCATTGGCAAGCATCTTTCCCCTCCCTTTTTTATTTTTTACTTTTAGCTCTAGAATAGAGTAACTTTGATTTATTAGTATAATTTAGACCTTCTTTAGTATTAAAAAAAAGTTACCCCATGGGTTTGAAAACAGTAGGAGTTAGCTCCTAAATTGTCAAGTTAATCAGCAGTGGCTAAACAGATAGCAGAGGGAATGTGATATAATTCGAGGCTAGAAAGGAGTAATGCTTTGGGTACTTACTACCTCCCTCCCTTAAAAAATACTACAATCTATAGACTGTTCCCTTTAATAGTTGTTCAGAATTGGAAGTCTTCTCTCATACTTGTTTCTATCCCCCAATAAGAGATCATGTTTGGCTTATTAAAACATCAACCATGTCCAAATGATTGTATTTTTATCTTTAACAAATTATATCTGAATTTTTTTTTTAGCAATAAGACTAGAGATAATGTTCAAATTTTGGAGGGAATCTCTGCTTCAGTAGGAGCAACATGTTTGTGTGACTCCTGTCAAAATGACTTCACCTAAAGTAAGCAGTCTCGTGGGATCATGTTTATCAGAAACGTGTTTTTCCTAGTTATCTGTATCCTGCTGAGTGTCTGACAACTCCACCCTTGATGAGGGTGACGTTCCCCCCATGGTGGTGGTTGAAAAGATGAGGATCCAAGTCCTTCCTCTGGTGGTGTTTGAATTTCACTGAGTGGGAGGAGAAAAGGAAAGATGAACAGATACTGGACTTCAAGCAATTGTGCGGTGTGGCTGTGTTAGAGAAGTGTCAGGCACGTTGAGAGTGTTCTGAGTGGTGGCATCTTACTAAAGCAATCCAAAGGACTACGGGTTTAAATGAAAGATAAATGCAATCTGTAGGGAAGGACTGTTGTGGTTATTCCAGTGGCCCGTGCAGCAAGCCCTGGAGTAACCTTGATCTTTGTCCTAGTTTCTGGCTTGTTCTCGTCCTACCTGAGTCTGAGCCTGGGAACTGGAGGAGTGGCCCTGGTGTGTTCACTCCTTTGATTCTGGAACTTCCTTCTTGTCTCTCAAAAGTGTTTGTGACATAGAATTTCCATTTTCTAATATAAAAAATGTACAGAGTATATTTGTATATTTGTTTGATAGAAGACCCTTAAATGTTTGGAGACACCCACCTCATCTCTATGTAGGCAGTGGTCTCCAAACCTCTGCGCTCATTGACCTCATCAGTAAGACTTTCTAAGCATGCCCCGCAAGGTATTTATTTAAACTCACACACACTGCTCCAATGATTTGTTATTAAAAACATAGCAAACATAGAAATTTACAGGGAATAGTCTACTCGATAGAGTTTAGAGTATGGGGCAAGAAGGACTTAAAGGTAGCACGTAGAAGGCAGCAGTTGGTTAGAGAGTGTGTCTATATTGTTGGTGGGCAAGTAGATGTAAAATAGGCATGGAAGCATGATTTTAGATCAAGGTTATTCATTCATTCATTCTTAAGAGCCATTTTTGGCTAGAAGAAAAGAGTGAATAATTAGATGTTACCTTTATAAGAACTCTTTTCAATTCTGTTTTGGGGACCACTTGATATAGTACATCTCTTAAATTCCTGAAAATTTTCTCAGTACGCTGATTTAAGCAAAACAAGCAAAGAAAGGAGGGAGGGAAAAACCTCAATAATGCAAATGCTGACTCTCATGCCTGAGAATTTCTGAATCTGAAAAGCACGTTTTGATAATTCCTGGTAATCATCACCTCACTGATTATTTGTTTTTCTTCTATTTGTTTATTACCCCGTGTCTCCAAATGTGTGGAAGATGTACAGATTTATTTTCAGATACCTGAGATAGGAGGGGCCAATGTTGGTATAATTGAACCTACATTTCAGCTGCTTGGGGGCTGATGGGTGGACACTGCCCGGAAACAATGACTCGCACCCTCTGTTTTGCAAACACAGTGGATAGCATCTTGCTGAACGAGGGCCTCGATATGGAGGCGGCATTCCAGTGTTTACTTCTGGACCTATGAGTTCCTTTAGCACAGTTATTGTTAGTAGTTTATAAAGCCATATTTAAACTTGTACACTTGATTGTAAGATAGATTTGAATTGTGCACTATGTTGATTACTGTATATAAATGTGGAGATTCTGTATATTTGGTCTCATTGCTGTATGTATTTGATGTGTATATGATAACTAATGGATATGAAATAGCTGGCTGTGAATGTCTTTATTCCAGTTTGCTTCTCTTTTGCAAATTTGAATGTTTAAACTTTACACCCATGGGGAAAATCTGAGATATTTTTTGCATCTAATATACTGTTAAGTGGTGGTCTCTTAGATGATTGGGAGAATATTTAATTTTAAGGCTCATGTATAATGAGAAGGGAGGTAATGAATTTTTTAGGCGTATGACTTTCTGATAGAATTTTAAATGAATGTTTTTTAAGTA EMBV3_41792 CATTTGCCACATTATAAATAGTTCTCTGGATAGAAGAGGAGAAAATTGTCAGAGGATGGG Gene BVV0102_246015 + 0 NULL GK000024.2:2252599-2406660 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21221 CGTCACCCCACTCCGAAAAATTAGACATGCCCTCTTCTAAATGTGCCGTGGGGCTAGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42630 ACTGCCCACACCGAAGCTCTGCTGCAGCAGGGGGGCTGGACTACCTGGTGCTGAACCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30436 TTTGAGCCCCAAGAGTTTGAGCAGCTGGTGGCCCTGAGTCGATACAATGTCCTGAACAAT Gene GeneID:522866|PLA2G4F:XM_002690808:31_cdna Constitutive 0 NULL GeneID:522866 10 GENE PLA2G4F NULL phospholipase A2, group IVF EMBV3_18416 AATTGGCCTCTTGTGTGGGGCCAGACCTCTCTGCTGCTGTCTGCATCTATCTCTGCTGTA Gene GeneID:280873|MX2:NM_173941:5_cdna Constitutive 0 NULL GeneID:280873 1 GENE MX2 NULL myxovirus (influenza virus) resistance 2 (mouse) EMBV3_29460 GGAATCACATGGAAGTAAATATCACACCCAGAGTCTAGCACGGTACCTTGGCCCAAAGGA Gene BVV0101_023433 - 0 NULL GK000026.2:11288075-11389811 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21687 AGCCATGGAACAGAAGGCCCAGGGCACCACAGTGCTTACAGGAGAACTTGAAACAAAGTA Gene GeneID:100336407|LOC100336407:XM_002698608:5_cdna Constitutive 0 NULL GeneID:100336407 27 GENE LOC100336407 NULL SAP90/PSD-95 associated protein 2-like EMBV3_39601 TCCTGCTGGATCTCAATGATGAGAACAGTAACCAGAGTTTCCATTCAGAAGGCTCTCTGC Gene GeneID:618295|BCL7C:XM_002698093:121_cdna Constitutive 0 NULL GeneID:618295 25 GENE BCL7C NULL B-cell CLL/lymphoma 7C EMBV3_29363 CTCGGCCAGCGTTTGTCTGTGGCTCTGCGCTGTTGTCTCCCACATAAAGATTCCTAAGTT Gene GeneID:508142|TOMM34:XM_002692469:529_cdna Constitutive 1 NULL GeneID:508142 13 GENE TOMM34 NULL translocase of outer mitochondrial membrane 34 EMBV3_01606 GACTTCCTGAGAGTAAATCCTGATAGCGAGTGGGCTGTCTCTGCAGCCTGTATTTCTTCT Gene BVT0102_250336 - 1 EMBV3_24998 GK000030.2:111588264-111615617 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25932 CGTGATCTCAACTGGATCTTCGATGGACTATACATCTGTATGGAATCTGCAAACAGCGCC Gene BVV0102_445599 + 1 EMBV3_26385 GK000003.2:34270502-34283444 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173000 1 XLOC_104269 Coding TCONS_00173000 XLOC_104269 Coding Coding SARS 3:34276467-34303343 j TSS128719 2038 1 TCONS_00173000_1 514 12 0.924613953488372 0.000366306388622937 0.000126557019253342 0.000656002497853901 0.000196652997397222 0.00083132512176614 0.000424093260678064 0.000391314991920114 0.000493183116608485 0.000346485129404722 9.28827389709958e-05 5.66291334091265e-05 8.20332715875688e-05 5.12696197300228e-05 1.41431413294844e-10 6.90184833492311e-06 0.00195598412776146 0.000474013559863043 0.00379677613583715 0.00026129755050881 0.000578598113330985 3.85478513444041e-10 0.000647412223794285 0.000590202113756844 0.00148957114589381 0.000571933829360769 0.000773385380489358 0.000587264192469014 0.000417771479498642 5.31239054919702e-05 0.000737975257540728 NM_174175.2 SARS Bos taurus seryl-tRNA synthetase (SARS), mRNA. 0.0 2883 99.75 0.788518155053974 NM_006513.3 SARS Homo sapiens seryl-tRNA synthetase (SARS), transcript variant 1, 0.0 2304 90.99 0.810598626104024 TCONS_00173000_1 sp|Q9GMB8|SYSC_BOVIN SYSC_BOVIN Serine--tRNA ligase, cytoplasmic; 0.0 1066 100.00 0.998054474708171 2 coding 0 0 0 0 -0.671972256344235 0.00424624752446247 0.0353446336788621 0.548037069769035 GCTTCCGCCGCGCCTGCGCAGGAAGGGCGGATCAGTGCGCGGGTGCAGTGCGGCGGTCATAGGCTGACTGCTGTGGGACGAACCTCACTTCCCTTAGTGTTGACCCGGGAGAAGGAACGATGGTGCTGGATCTGGATTTGTTTCGGGTGGATAAAGGGGGGGACCCAGCACTCATCCGAGAGTCGCAGGAGAAGCGCTTCAAGGACCCGGGACTGGTGGACCAGCTGGTGAAGGCAGACAGCGAGTGGCGACGATGCAGATTTCGGGCAGACAACTTGAACAAGCTGAAGAACCTATGCAGCAAGACAATTGGAGAGAAAATGAAGAAAAAAGAGCCAGTGGGAAATGATGAGTCCATTCCAGAAGATGTATTAAATCTCGATGACCTCACTGCAGACACTTTAACTAACCTGAAAGTCTCACAGATCAAAAAAGTCCGCCTCCTCGTCGACGAAGCCATCCTGAAGTGTGACGCCGAGCGGATAAAACTGGAAGCTGAGCGGTTTGAGAGCCTTCGGGAGATCGGGAACCTCCTGCACCCGTCGGTGCCCATCAGCGATGACGAGGATGCCGACAACAAAGTAGAGAGGATTTGGGGTGATTGTACAGTCAGGAAGAAGTACTCTCACGTGGACCTGGTGGTGATGGTAGATGGCTTTGAAGGCGAAAAGGGGGCCGTGGTGGCTGGGAGTCGAGGGTACTTCCTGAAGGGGGTCCTGGTGTTCCTGGAACAAGCACTCATCCAGTTTGCCCTTCGGACCTTGGCAAGTCGGGGCTACACTCCCATTTATACCCCCTTCTTCATGAGGAAGGAGGTCATGCAGGAAGTGGCACAGCTCAGCCAGTTTGATGAAGAACTTTATAAGGTGATTGGCAAAGGCAGTGAAAAGTCTGATGATAACTCCTATGAGGAGAAATATCTGATTGCTACCTCTGAACAACCCATTGCTGCTCTTCACCGGGACGAGTGGCTTCGGCCAGAGGACTTGCCAATCAAGTATGCCGGCCTGTCCACCTGCTTTCGCCAGGAGGTGGGCTCCCATGGGCGTGACACCCGTGGCATCTTTAGAGTCCATCAGTTTGAGAAGATAGAGCAGTTTGTCTACTCCTCGCCACACGACAACAAGTCCTGGGAGATGTTTGAGGAGATGATCGCCACCGCGGAGGAGTTCTACCAGTCTCTGGGGATCCCTTACCACATCGTGAATATCGTCTCAGGTTCTTTGAATCATGCTGCCAGTAAGAAGCTTGACCTGGAGGCCTGGTTTCCAGGCTCGGGGGCCTTCCGTGAGTTAGTCTCCTGTTCTAACTGCACAGACTATCAGGCTCGCCGGCTCCGAATCCGATATGGGCAGACCAAGAAGATGATGGACAAGGTGGAGTTTGTCCACATGCTCAATGCCACCATGTGTGCCACAACCCGCACCATCTGTGCCATCCTGGAGAACTACCAGACAGAGAAGGGCATCCTCGTGCCTGAGAAATTGAAGGAATTCATGCCGCCAGGTCTCCAAGAACTGATCCCCTTTGTGAAGGCTGCGCCCATTGACCAGGAGCCCTCCAAGAAGCAGAAGAAGCAGCATGAGGGCAGCAAGAAGAAAGGGGCAGCGAGAGATGTTGCCCTGGAGAGCCAGCTGCAGAACATGGAGGTCACCGATGCCTGAACATTCCTTTGTCCCCTCCACCAGGCTTCCACTGCCATCAGGAGCCAAACGTGATCTCAACTGGATCTTCGATGGACTATATATCTGTATGGAATCTGCAAACAGCGCCAGCACTGTTGACTGAAGCTATCATGGGTTAAGGCATCCAGTGCCATCTTTTGAGTCCCCAAGAAAATCTATCTAACTTGTCTGGGACATCAGGCTTGCAGCTCCTGACTGCAGCTAGCATTGGGAATACAGTTTTGTGATTAACGTAAATGGGTTCAGGGCTGCACAAAAGGAAACCTAGAGACTTAACTGGCTTCCCAGTTGATGGCTCCAGGAATGACACCTGGTCACCCCTCTGTTCCATTCATCAGTTCCTCCATCCACTC EMBV3_38433 GCTTATAGTTCTGGGAACAGGAAAGCTTCATCCCACTATTGCTCCTCAGCAGGGGACCTG Gene BVV0102_312800 - 1 EMBV3_36868 GK000008.2:7020889-7090574 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35546 CGGCGAGGATCGCGCGAGGCAAGATCACTGACAGCCACCCTCCCGCCGGCCTGGGACCCT Variant GeneID:514335|ES1:NM_001034463:48_cdna 393^875 1 EMBV3_14696 GeneID:514335 1 GENE ES1 MGC127117 es1 protein EMBV3_35969 GCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAA Gene BVT0102_270437 - 1 EMBV3_10040 GK000024.2:61792099-61816381 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00010367 TCONS_00022064 TCONS_00214738 TCONS_00250553 TCONS_00098385 TCONS_00251853 TCONS_00165811 TCONS_00032587 TCONS_00141355 TCONS_00070841 TCONS_00031938 TCONS_00177994 TCONS_00141464 TCONS_00210178 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00200531 TCONS_00198662 TCONS_00088289 TCONS_00056147 TCONS_00073692 TCONS_00116799 TCONS_00089425 TCONS_00019991 TCONS_00189806 TCONS_00197973 TCONS_00207228 TCONS_00250544 TCONS_00239410 32 XLOC_131641 XLOC_142855 XLOC_005918 XLOC_012735 XLOC_130757 XLOC_153496 XLOC_058631 XLOC_154794 XLOC_100651 XLOC_018827 XLOC_085783 XLOC_042618 XLOC_018183 XLOC_107767 XLOC_085892 XLOC_128688 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_120316 XLOC_053076 XLOC_033950 XLOC_045454 XLOC_070965 XLOC_054210 XLOC_010669 XLOC_115843 XLOC_119632 XLOC_125746 XLOC_153487 XLOC_146076 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_01690 AACAGATCACAAGAAAGACTTATCCAAAAGGTTATATATCAATTGATGCCATGAAGAAAT Variant GeneID:768019|C10H15orf43:NM_001077078:144_cdna 397^485 1 EMBV3_26947 GeneID:768019 10 GENE C10H15orf43 C15orf43 MGC137479 chromosome 15 open reading frame 43 ortholog EMBV3_39626 ACTACGCTACAACACAGTTCTGAGCCATTCCCTAGTTGGACGCCTGGGACTGATGGCTTT Gene GeneID:787971|LOC787971:XM_002693251:531_cdna Constitutive 0 NULL GeneID:787971 15 GENE LOC787971 NULL similar to olfactory receptor MOR38-1 EMBV3_07304 AAATCCAAAGTCAGTGTAGACTTCCAGGTTGGTGTGACTCAGTGGCTCAGGGATGGGCCT Gene BVV0102_280148 + 0 NULL GK000014.2:11207502-11327980 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051299 1 XLOC_031160 NonCoding TCONS_00051299 XLOC_031160 NonCoding NonCoding - 14:11220596-11222662 - TSS38285 1037 3 TCONS_00051299_2 90 0.166827386692382 2 0.498789346246973 0.000354244930298838 1.05816908428955e-05 0 0.000184930751957777 5.62925281953394e-09 4.13930949184596e-05 0 5.70368048967086e-06 6.84774660581374e-05 0 4.41501496916167e-06 0 0 0 0 0 0 0 0.000957310339299033 0.000161339798296402 0.000459603012801492 0 0 0 0.000945605250391765 7.64423079483358e-06 0.000152550649822779 0 0 0.000371055154479096 XM_005219714.1 VSTM1 PREDICTED: Bos taurus V-set and transmembrane domain containing 1 (VSTM1), transcript variant X2, mRNA. 2e-36 158 89.74 0.111861137897782 0 noncoding 0 0 0 0 0.0113434687858877 0.929573539112837 -0.0109798140578413 0.850881197363599 CGTGCATTCTGAGAGGTGGTGGCATAGTTGGAGAAGGGAGGGTGGGCATGAGTCCACTGTGATTTCTGATCATTTTATGGCCCCGCCTGCAAGCTCAGGCTCCAAAGCCAGGGATTTCCCATGTGCGGATGAGAAATCACTGGTTGGTCCCTTGGCAGCAGGACAAACAGAAAAGGAACAGATTCACCCAAGGGGCCAGGAAGAGCAGTTTTCATGACGAAGGACGATTCCATCAGCCCTCCCACAAGCTATTCCTCACAATGAAATCTCTGCTTTCAAATGGATGGCCACTCCTCCCTCTCACAGCCCCTTTACTACAGAAAAGCTGCTGCTGTACCAGCTCCAATCAGGCATTCCATTCCCTGGCCCCAGGTACCAGTGCAGAGATGGAATGTTGTTGATGGACCAGTGCTGTTCAATGAGGGGCAGGCAGAGATTCCTCGAGCTTCTGGGAAAAAAAGCATCTTCACTCTTCAGCGACAGCATCTGCCCTCTGCTTTGAAGCTGAAGCTCTGCAGAAGGTAAAGCAGATAGCTTGGAAGAAACTGAGTCTCAGGCCCATCCCTGAGCCACTGAGTCACACCAACCTGGAAGTCTACACTGACTTTGGATTTTCCAATAAATCTGCCCACTCTGTTATGAATTAATTCTACGTGAGTGGGGCTAATGCCACAGAGGAACAGTGGCCAATAGGAAGCAAAACTTGTCCTCTCACAGGTAGAGAAACTGAAGCCCAGAGAGGTCCAATGATATGCTCAAGGTCACACTTCCAGGGGAAAGAAGGGGTCAAACTCTTTCTGGAAGTCTCCAGAAGAAAGACTAAGAGGATTCCAGTTTGGAATTCCTAGTTTGAAAATGGACTTCAATCCCTGATTTTCTACAGGGAATGAAGTTCCCCGATAGAAGCTACTAAAGTTACTAAAGTGTTAGTCGCTCAGTTGTGTCTGACTCTTTGTGACCCCATGGACTACAGCCTGCCACGCTCCTCTGTCCATGGGATTTCCCCGACAAGAACACTGGAGTGGGTTGCCATTTCC TCONS_00051301 TCONS_00051302 TCONS_00051303 TCONS_00051304 TCONS_00051305 TCONS_00051306 s 5' 105319 TCONS_00051301 TCONS_00051302 TCONS_00051303 TCONS_00051304 TCONS_00051305 TCONS_00051306 s 5' 107384 EMBV3_12874 ATGCAGGCGCATCCTGGGAAGAAGAGAGCCTACAACTGTCCCAACAACTACCACAACAAC Gene GeneID:100336891|LOC100336891:XM_002698982:155_cdna Constitutive 0 NULL GeneID:100336891 28 GENE LOC100336891 NULL anthrax toxin receptor 1-like EMBV3_16735 TCCGTGCAGGTCAGACGTTCCTCCAGAAGGTCTCTCTTAAGCTGCAGGGCAAACAAGTAT Gene BVV0102_182329 - 1 EMBV3_27143 GK000003.2:121021020-121049467 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174939 1 XLOC_104740 Coding TCONS_00174939 XLOC_104740 Coding Coding - 3:121038585-121042881 - TSS129710 290 3 0.933178114086147 0 0 9.57309609577402e-05 0 0.000238346381875457 1.23346729790103e-05 0.000301640362512292 0 2.72074438679314e-05 2.83757858583083e-05 7.89372444582733e-06 0 1.97881581747403e-05 0 0 0.000182148849425631 0 0 0.000197819582644947 0.000123990263493271 2.09360206648918e-05 0 3.16345695693203e-05 0 2.38912511467398e-05 0 0.000202039016387519 0 0 0 XR_230793.1 LOC101904847 PREDICTED: Bos taurus uncharacterized LOC101904847 (LOC101904847), 3e-147 524 100.00 0.996551724137931 XM_005247049.1 FARP2 PREDICTED: Homo sapiens FERM, RhoGEF and pleckstrin domain protein 2 (FARP2), transcript variant X1, mRNA. 1e-57 226 80.00 0.858620689655172 0 coding 0 0 0 0 0.0600360490282753 0.658080833088273 0.0536029156712484 0.267818255645603 AGGACCAAAGAATGCAGTGCTCCGCCTGGCGGTGAAGTTCTTCCCACCGGATCCGGGTCAGCTGCAAGAAGAATATACACGATACTTGTTTGCCCTGCAGCTTAAGAGAGACCTTCTGGAGGAACGTCTGACCTGCACGGACACCACAGCTGCCCTCCTGGCATCCCACCTCCTGCAGGCGGAAGTCGGGGACTACGATGAGGCGCTGGACAGGGAGCACTTGCGTGCCCACGAGTATGTGCCACGGCAGGAGCGTGCCCTGCACAGGATCCTGGCGTTTCACCGCGAGC TCONS_00171645 r 3' 3301 TCONS_00171645 r 3' 3411 EMBV3_36187 ATCCAGCTTGAGTAAATGCACAGTGGCTGGAAAACCCCATCAAGTTTGGCAATGGCTGGG Gene BVT0102_047669 - 1 EMBV3_42265 GK000017.2:55747670-55759605 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075564 TCONS_00075567 TCONS_00075563 TCONS_00075568 1 XLOC_046611 NonCoding TCONS_00075568 XLOC_046611 NonCoding NonCoding - 17:55756939-55758176 - TSS56950 1237 3 TCONS_00075568_6 78 1 0 0 0 0 0 0 0 0 0 0 0.00156663526854845 3.13831248290796e-05 2.89060873064938e-06 0.000120786451400729 2.86837722194971e-27 0 0.00139323697975297 0.0021133324273638 1.88940722462752e-20 0 0 0 0.00250785557311412 0.00043306704444864 0.00101433840118372 0 0 0 0.000629627545842269 0.00160904489688365 0.00250307898218429 XM_005217938.1 RHOF PREDICTED: Bos taurus ras homolog gene family, member F (in filopodia) (RHOF), transcript variant X1, mRNA. 0.0 2232 100.00 0.999191592562652 XR_243002.1 LOC338799 PREDICTED: Homo sapiens uncharacterized LOC338799 (LOC338799), 5e-76 289 76.91 0.350040420371867 0 noncoding 1 1 1 1 -0.00742661922763282 0.956737070432149 0.0305830561464765 0.693176625388803 CCACAAATGTCACCTGCCAACTCCCCTAGGCTTCTGTGTACCAACAGTTCTGTGGCAAGAACCGGGTTAAAGAATTTTTTTCTTCTCCCAAATCTCTCCAGGAATTCCTAGTGAAGAGAAGAATGGATCTGGGTCCTCAGATTGTGTTGCAGGTAAGGGAGTCTGCCGGCCTGTGGGCATTTCCAGTGCCTCAGCTGGCCTGCACTGGCCTACTGCCTCTGAGGAAGCTCTGAGCAGCTGGCCTGGCCACTGGGTATTTTTAGCTACAAAGCCAGCCCCTGCACCACCACTGGAGCGAGGTCCAAATCAAACATGCTCCCTGCAGGGTGGGGTTGGGGCTCCGCCAACCTCTTGGCCAGGCAGGGTGGGTGGGCAGGCTGGGGCCAGTGTCAGCTGTCTTGCCTGGGCCTAGGCCAGGTTGGGAAGACCCACTTTTCCTCCTCTTGGCTCTGTGTTATGTCATTTGTTGTAAGTTGAAATTCATTTCATAGAAAAGGTAGAAACTCAGGTCTGAGGACTTTGAGAAAAGTCAAGTGGACTCCCCCTCCAGGCTGGAGCAGTTACCACAGTTTGCTCAGAGTAGGGTGACCCTTCTAAGTGAATTCTCCCAGTGACCCTCCCAGATGAGGCAGTCTTACTCTCCTAGTCACTCCCTGAGCTTCAGGATCCCTGACACAAGGTCAATCCTGCAGTTGGCTCAAAGGTAAGTGGTCCTCCCCTCTCTCTCAAAACCTTCTTCCATCCTCCCTGTCCCTGAGTGATGCTCTTCCCCTCCTGCCAGCGCCAGGCTGCCCCTATGCAGAGATGGCCCCAGCCACGGCCTCACCAACCAATCACAGCTCCTCCTCAGTCACTGGAGAGAGCTTTGGCTTGGCTCTTCTGTTCAGAGCCTGTGTCTGACTCCTGTCTTCAGCCTGGCAGCCAGGCCTCCATGGTCTAAGCCTTGGTTTCCTTGACAGCCATGTCTCGCCCTTCTCACGCCCCAGCCATTGCCAAACTTGATGGGGTTTTCCAGCCACTGTGCATTTACTCAAGCTGGACGCCCATCCTACTTCCATTGGCCCTTCCTGCCAGCACTGCCAAGCTTAGTTCATGTACTACCCAGGTCTCTCTCAATCCCACAGGGGCTCTGGTGTCTAAATAGTTCACATCTTGCATTTAGACTGCTTCCCCCAAGACTGAGTTCCTCAAAAACAGGAACACAGTTGCCTCTCAATAAACTTGTGCTGCAAAAAAT TCONS_00075567 s 5' 0 TCONS_00075567 s 5' 0 EMBV3_28261 CCCTTCCAAGAGCACATCAGTAAGTCCAATGTGTTCCTAAGTCCAGCAGAGTTAGCCCAG Gene BVV0102_222186 + 0 NULL GK000020.2:71448877-71496250 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41016 CTCTATTGCATTGGCTGCATTCCAATCTGTTTTATCACTAGCAGATTCACTTTCACTGCC Gene BVT0102_071010 + 1 EMBV3_13337 GK000015.2:58063863-58144411 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059715 TCONS_00059709 TCONS_00059710 TCONS_00059713 TCONS_00059716 TCONS_00059718 1 XLOC_036490 Coding TCONS_00059709 XLOC_036490 Coding Coding ANO3 15:57641550-58133700 j TSS44752 5900 1 TCONS_00059709_7 608 0.0430508474576271 26 0.988064590195246 7.59516977585251e-84 1.99725062324872e-13 5.07873482103716e-05 2.56748143874023e-05 6.76955888687061e-19 1.13505545611789e-05 2.99798315094918e-07 8.2896704684932e-05 5.6944147155169e-34 2.57301251922386e-25 9.18181726837526e-28 2.00361063269073e-14 0 0 2.76541562539974e-31 1.86975659038223e-19 3.02994133268622e-06 8.00146622904911e-07 4.560209787506e-05 0.000151135888744447 8.82121292697887e-12 5.59220073290073e-09 6.72708218579661e-06 0.000167503200690626 8.06365731102054e-12 9.20712580132264e-09 0.000101786619159141 8.06349452073711e-38 9.12750743594157e-06 4.87514817697932e-05 XM_005216263.1 ANO3 PREDICTED: Bos taurus anoctamin 3 (ANO3), transcript variant X1, 0.0 9019 100.00 0.847457627118644 XM_005253063.1 ANO3 PREDICTED: Homo sapiens anoctamin 3 (ANO3), transcript variant X1, 0.0 3842 85.41 0.568474576271186 TCONS_00059709_7 sp|Q9BYT9|ANO3_HUMAN ANO3_HUMAN Anoctamin-3; 0.0 1181 95.72 0.998355263157895 1 coding 0 0 0 0 -0.0195609800739453 0.896549179795282 -0.0295908129838378 0.627257926826677 ATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAACCCAATTCTTCGAAAGGAGAAAGTGCTGCAGTAAATGGGGTAAAGGAATGATACAACCAGTGAAGATCAAAGAAGAGTATCAGATTTGTCTGTAACAATCTGTTATTTCCAATGGAAATTATTTTGTCACTCACAGGAGTCTTTCATCAGCCTTAAAATGGAGCTATTTAATTGGTATGAATATAAGCAAGAGTGAGATAGCAAAAGAAACTTCATTAAAACCATCTCGGAGATCCTTGCCTTGCCTGGCCCAAAGCTATGCTTACTCAAAGAGCCTGAGCCAGTCTACCTCACTCTTCCAGTCAATTGAGAGTGAATCTCAGGATCCCACTTCTGTAACCTCAATCTCCGCTGACAAAGCAGAGCAAGTTAACACTGAGGAAGAGAGAAAAGATTCTGTGCTCAAATGTTCTTTCACCGACCTCAGTGATTTTTGCTTGGACCTAGGAAAAGATAAGGATTACACGGATGAATCAGAGCATGCTAATTATGATCGATCTCGCCTCATTAAAGACTTTGTTCCTAAAAATAATTCTGAACCGAAGCCCAGATTACCTAAGAATGACATGAATTACATAGCATCCAGTGGACTTCTATTCAAAGATGGCAAAAAGCGGATTGATTACATCTTGGTTTATAGAAAGTCAAATATACAATATGACAAAAGAAACACATTTGAAAAGAACCTCAGAGCGGAAGGCTTAATGTTAGAAAAGGAGCCAGCTGTTGCAAACTCGGATATCATGTTTATTAAAATTCACATTCCGTGGGACACACTGTGCAAGTATGCAGAGAGACTGAATATTAGGATGCCCTTCAGGAAAAAATCTTATTACACTGACCGGAGGAGCAAATCAATGGGCAGGGAGCCTATAAAAGTAACCAACCCATCAAAACCCACGGACCTCAGAATAACAGACATCTATTATATGAACGCTGGGCACGCTGGGGAATGTGGTACAAGCATCAGCCCCTGGATTTAATCAGGCTGTACTTTGGTGAGAAGATTGGATTATACTTTGCTTGGCTGGGGTGGTATACTGGAATGCTGATTCCTGCAGCCATTGTTGGCTTGTGTGTGTTCTTCTATGGAATATTAACAATGAATGCAAGTCAAGTAAGCCAAGAAATTTGCAAGGCCACTGAAGTCTTCATGTGCCCTCTCTGTGATAAGAACTGCTCACTGCAGAGACTCAACGAAAGCTGTATCTACGCCAAGGTGACATATCTGTTTGATAATGGAGGGACAGTCTTCTTTGCTATTTTTATGGCAATATGGGCCACAGTCTTCCTGGAGTTTTGGAAAAGGAGAAGAAGTACACTAACCTATACTTGGGACCTTATTGAATGGGAAGAAGAGGAGGAAACCCTTCGTCCCCAGTTTGAAGCAAAGTATTACAAGATGGAGCGAGTGAATCCTATCAGTGGAAAACCTGAACCACATCAGCCTTCCTCAGACAAAGTCACTCGTCTTCTTGTTTCTATCTCAGGAATATTCTTCATGATTTCCCTGGTGATCACTGCAGTGTTCGCTGTTGTGGTGTATCGCCTGGTTGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCATCAAACAACACTGGCAGTTTGCAACTTCCGCTGCTGCAGTCTGTATCAATTTTGTAATCATTATGGCACTGAATGTTGCTTATGAAAAAATTGCTTACCTTCTCACTAATTTAGAATATCCTCGAACAGAATCTGAATGGGAAAACAGCTTTGCTTTGAAGATGTTCCTCTTCCAATTTGTCAATTTGAACAGTTCTATCTTCTATATTGCTTTCTTTTTGGGGAGATTTGTTGGCCATCCAGGAAAGTACAATAAACTTTTCAACCGGTGGAGACTAGAGGAATGTCATCCCAGTGGCTGTTTGATAGACCTTTGCCTCCAGATGGGAGTCATCATGTTTTTGAAGCAAATATGGAACAACTTCATGGAACTGGGATACCCGTTGATCCAGAACTGGTGGTCACGACATAAAATCAAGCGGGGAATTCAAGATGCTTCCATCCCTCAATGGGAAAATGATTGGAATCTGCAGCCCATGAATATTCACGGACTGATGGATGAGTACTTAGAAATGGTTTTGCAGTTTGGTTTTACTACCATCTTCGTTGCAGCTTTTCCTCTGGCCCCTCTTTTGGCTTTGTTAAACAATATCATCGAAATCAGGCTGGATGCATACAAATTTGTCACCCAGTGGCGGAGGCCTTTGCCAGCCCGAGCAACCGACATAGGTATCTGGTATGGAATTCTTGAAGGAATTGGTATATTGGCTGTGATCACTAATGCGTTTGTAATTGCTATAACATCTGATTACATCCCACGTTTTGTCTATGAATACAAATATGGCCCCTGTGCAACTCATTTTGAATATAGTGAAAGTTGTTTAACAGGATATGTCAACAATAGCCTATCCTTCTTTGACCTGAGTGAACTTGGCATAGGAAAATCTGGGTATTGCAGGTACCGAGACTACAGAGGTCCTCCTTGGAGTTCCAAACCCTATGAATTCACCCTCCAGTACTGGCATATCCTCGCTGCTAGATTGGCCTTCATTATTGTGTTTGAGCACCTTGTTTTTGGGATCAAGTCTTTCATCGCATACCTGATTCCGGATGTACCAAAGAACCTATATGACCGAATAAGACGGGAGAAGTACTTAGTCCAAGAAATGATGTACGAGGCTGAACTAGAACACTTGCAACAGCAGCGGAGAAAAAGTGGTCACCCTGTTCACCATGAATGGCCTTAGTGGATCTGTTGCCCAGTGGGGGCAATACCGTTAGTGGCAAATTATAATTCTAGGTGGGATCTAAGAGGAAGGCATACCTGGCAAACCACATGTATAATATGATACTTGGAAATACATCATAGCCATCTCTGGATTTGAAATATCCAGTCGTCTAGGGAAGAAGAAAAATGGCTCATGACCTTAAAAAATGGTTAGATTGAGAGTGCAGGAAGCCAGGGTCTAATTCTCAGAACCAGCCTCAGGGAGTTGTGTGTTTGGAAACCTCCACCTTCCATCAACACAGTATACGAGGGAGGGTGATGATGAGGTTTCTAATGACAGATTTCCATGTAAATGTACACAAGTCAGGCATGACTTAAAGTATCATGTGGTCCTCATGTGCACACTAATCTGACTTTGGAACCTTAGGTTGAGTTGAGCTACTTACCAAGAAATGACAAATTAGTTATTGCCTTTGCTGCCAGAACTCTGCATCCCTTCAAGTTACTGTTTTATAAGAATTTCCTTTGTTTCCTGCTGGGATTTTTGGATCTCTGTCACAGGAAATTCATGTTGTTTTTCACTGACTATGCAGTTGAAGAGTTGCACAACTTCAGTAGTCAAACCAAAAATCTAAGACTCCAAAAAGAATACCATTCATTGAAATAATACTCTATTGCATTGGCTGCATTCCAATCTGTTTTATCACTAGCAGATTCACTTTCACTGCCTTTTTTTCTCCTTTACTAAAGGCCAATGGAGTCATATTGTTATAAAATATGGATGCTCATTCTCATATCATTTAGAAGATAATGAATCCATATTTTACTGTGGAAGGCTGTTTTCTAGTATACTTAATTTCCACCTCCCTGATTTATTACAGTTCTCACAGAATAACTTGAAATGCTGTAAATATATTGATTTTCCTTGTACCTTTGCACCTTGCAATATGGAACCCAAGTTATTAATACAATTCATGCAGCTCTGAGACCAGTTACACAATATTCCACTGTAGCTTGTTTATTCAGGAAAACAGAAGCCAGATGCTTTGCAACATATAAGCTTTTCCAACAATGTGCACTCTTGCTCGTGAGCTGATGAAAACAATGCATGAATATAAATTTATATTATTTGTAAAAGAACACATTTTTTTGAGTCTTACTTTCTCTTCATCACTGAAGGGAGTTTTCTGTTATTTCTTTGGTAGATTGATTTGGTTTATTTTTGAAAACTCACTAGAAACAAAGTCAAATTAATTGTGAAAGACATTGTTTTTGCTTGTTGTGGAGTTGCTGTTTCTCTGAACTCTGTGAGCATGAATGTTCACAGACTGATGTTGAGGAGGCATTCAAACAAAGTCTGGTGGAGGCATAAACTATGGGGGCAGGATGGGAAGAAAGAGAAGAGTTGAATTAAGAAAATATATAGTAGAAATCAAGACACTTTTTCTTGCAAAACAAAACTAATCTCAATTTTCTTCTTCTGGGAATGGGATTAGGCATGCATAGTCATGGTGGTGGTGGTTCAGTTGCTAAGTCATGCCCATTTTTTTGAGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGACAAGAATATTGGAGGGTTTGCCATTTCCTTCTCCATGGGATCTTCCCGACCCAGGGATCGAACCCAAATCTCATACATTGACAAGCAGACTCTTTACCACTGAGCCACTAGAGAAGCCCATATGTAATCATGCATTCATACACATATGCGGTTGTTTTGTGTGCCGTTTAAAGGTACAGTTATTTCCAAAATTTATAAAGACCTGTGGAAATAAAACTACTTTGTATATATGCAAGGGTTTCTCTAGCAAGAAAAATCATAAAGTTTCTCTTCACTATTTAAAAAATTTTAACAATGAAGTGTTTTTTGTTTTGTTTTATTTTAGTTTTCCTTCTTTCTCTCCAGAGATAAATAAATCACAGTGGTTGGTTGATTTTTGTCAAAAATACTTACTTCCCTACCTGCCCTCTGATTCTGAGCAAGAGGAAGAACTTCAGACTCTAAATGTCCCTCCCATTCCCTTGTCTCAAGGAATTCTTCCATTCAGATTCCAGAATCTTCCTCAGATTCCAGAGAGGTTTTGTTTCTGCCACCTGCCTATTCACAGTAACTAACTGTACTAATTTCACAAAGAAACTTTAAATACTTCCATTTTGTAGCATCTGCATTTCCTTTTCTTTGTTTGTTAAATATATACTCATGCCTGAGGATAAATACTCTCTATGCCTATTGAAGACATAAAAGAACCTGACATTTATGTCCTTTAACAATTAGGGACACAAGGCAAAACCATTTGCCTTATAGTAAAGAATACAGATAGCCCTTGAGAATTTGTCTCTTTCTGAGTTATTTTTATACAACCATATAAAATCATATTGATTACCTAGCAGGAATAAATGAAAAGAAAAAGGTATTTTTAATAAAAATTATGATACATTGATTTAGGAAATGCCTTCTCTGATATTTTTGAAATCGATGGAAAAACAGAGAAACAATGAAAAACATTATCTGAAATTCTCCTTTTGTGAAGCAATGCAGTAGAATCTAGTTATATCTTCATCATCGTTGACAGCAAAATATTGACAGCCCCTCACAGTATATCGGTTTTAGACAACTCAGCTTTAGTTGAGAGAAATATTTTATATCATGGTTTTCGTATGAATACAAATTATTTCTCAAAGATTTATATAACACACTATTCTCAGGAATTCTGTATTACATGAATGCTGCTTATATATTTTCTTATTCTAAATTGTTGTCTTTTCAAGCAGATAACTAATATATACATGTATGTGCATGCTCTCAGCCTTGACAAGTTGCGCCAGGCTGTAGCATTTTCATTGTACAGTGTGTGGAAAATTGCTCTAGGTTATAGCTGAAATTGTTTGCAGTTGTCTGAGTCCGTGCACGCACTTTGAGATAAAATGTGCCTGAGTGACTGCATGAGGAGATACAACTTCTGAATGCTGCATATTCTTCCAAAATGACTCTTAGCACAATCTGTTGTAGAATGCGATGAAAAGGAATCTTTTTCACTCAATAAATTTTCATGTGAGATGG EMBV3_30273 CCACCGTCTCCGGAATCTCGCTCTGCCCTGGATTTCAGTTTGTGGAAATGAGCAGTCGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09984 TGTCGCGGCCTGGAGCTCATTGCTTCAGAGTCTCACCCACGGCTACATGTCTGATGTCAA Variant GeneID:507197|SHMT2:NM_001034282:956_cdna 276^556 3 EMBV3_29898 GeneID:507197 5 GENE SHMT2 MGC128707 serine hydroxymethyltransferase 2 (mitochondrial) EMBV3_42772 GAGTTGTGCAGGAAATTCTGGAGACCGAACGGACTTACGTGCAAGATTTAAAGAGCATCG Gene GeneID:100336915|LOC100336915:XM_002690334:2_cdna Constitutive 0 NULL GeneID:100336915 9 GENE LOC100336915 NULL pleckstrin homology domain containing, family G (with RhoGef domain) member 1-like EMBV3_03278 CTCCATGGCTAACACTAGCAAGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAG Gene BVT0101_067348 + 1 EMBV3_00402 GK000018.2:228764-351041 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251625 TCONS_00082029 TCONS_00166748 TCONS_00138892 TCONS_00133817 TCONS_00253007 TCONS_00004182 TCONS_00082022 TCONS_00004173 TCONS_00251677 TCONS_00007850 TCONS_00196789 TCONS_00132066 11 XLOC_154566 XLOC_050894 XLOC_101584 XLOC_084763 XLOC_081223 XLOC_155948 XLOC_000983 XLOC_154618 XLOC_003410 XLOC_118454 XLOC_080699 Coding TCONS_00132066 XLOC_080699 Coding Coding - 23:7093311-7102105 - TSS98892 8794 7 TCONS_00132066_11 123 0.945189902206049 1 0 7.13727735132828e-06 2.9873255891193e-06 7.50325315329213e-06 1.46268561336438e-06 2.99085920319495e-06 1.24044425683342e-06 1.71032856545689e-06 2.19236920256603e-06 4.79343649727863e-06 0.000767795012496309 0.000368711369605416 0.000336024836249411 0.000103000976284977 0.000409937210419543 7.39255047263018e-05 0.000476616862090315 0.000612597109439181 0.0013304767496547 5.64730400017029e-06 2.21144063662903e-06 5.06072244393771e-07 0.000433971474245166 0.000500985691697242 0.000853409813723909 3.12131618058053e-06 2.80362095478888e-06 2.43726306322051e-06 0.000466169177175499 0.000330046515576611 0.000716729729457703 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1256 89.60 0.106095064816921 TCONS_00132066_11 sp|Q8N8A4|GAH6_HUMAN GAH6_HUMAN HERV-H_22q11.2 provirus ancestral Gag polyprotein; 5e-13 64.7 29.91 0.861788617886179 0 coding 1 1 1 1 1.55657144251834 0.000204121725010461 0.00720252653094945 0.932219370990892 GCTCCCCCATATCCTAGTGGTCCCCAAAATATCAGACCCTGGTGGGAACTGACAAAAAGACAGGGAAGGGCAAACTCATGAATAGTTATGTATCTCAAAGAACAATCCAAAAACTGATCAGACAGCCAGCAAAATAGTCATGGTGATTATCTCTGGGACACGAAACAGTGCATAATTTTACTTTTCTCCTTCTCCTTTAGATTCTTTTCTCTTTTCTCCTTTAGACTGTCTCTATTGTCTAAATTTACTGTTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATAAAAGGAGGAGCCAAAGCGCTTTCTCTCGGACTCTCTCTCCCGCGTGCATGCGCGCTCTCTCTCTGTCTTTCTCTCTCTCTTTTTCTCCCTCCCCACACACTTCTCCACTCTCTTCTCTTCAAGTCTTGGATTCTCCTCCTATCTTATAAGTAAAATAGAGCTGTAACACTGATTTGCCTAAGAGCTGTAGCACGGTTTGTCCAAGACCTGAGAGCTGTGACGCGCCGAGGGCTTTAAAGTCCGTTGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACATTTACTATACAAATGTATGCTATTTATGTAAGAAAAAAATAGTTTTAAATATCTTCAAGATGCCACAATACAATACTCAGCACCAGGCAAAGCTCTGTTCGTCAAGTAACTGAGAGAGTCATTTCCTAGGCAGGTTGATAAGGAGTCTAGGGGTTCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTTTTTCTTTCTCCACATTCCTTAGGATTAAATAACAATAATGTATCCTGCCTAAGGACAGTCTCTGGATTAAGGACGGTCTCTGGTTTAAACCTTCTGTTATCTTAAAATGTAAATTATGGGAGTAGGTCTGACAAGGTCTTTATAACCTCCAGACATTCTTTGGATTATATAACTTCATTGTTATCACTAGCAAGTGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGACCCCGGATTGAATTCTCCGGGGGCCAAGAATCCCGGTGTCTTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCCGGGATCCTTCAGGACAAGGTAAGGCTGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCAAACACGTTTTCTGCTGTGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGACAGGCTCTGCATGAAGCAAGTAAGGAGCCCTGCTCTGCGGTTCCACGGTGATCTCATATGGCTTATGGCAGAAACCTGTCGGGGCATTATACCGACCTGCCAGTGCCAAGAGGCACCCAATGTCTCCTTCGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACCCTCCTTTCTCAGTCAAACTTTTCAGTCCCTTTGACCATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATTGGATATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTATACTGTGGCTTAGGTCCAAAACTTGGATTGGTAGTCAAGAAAGCGCCTAGCCTCGCTAGGAATCGAAAGTTTGGAAGCTAGATGGAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTTTTCTTTGGTAACGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTGTTGGGGGCCAGAGTGAGGCACTCCGCCGGTGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATTGAGCCTCAGGAGTCCCCCTGGAAATCCTCGAGCATCAACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTCGGAGAAGGAGTTAACTTAGAGCTCCAGTTAATAAAAACTCCTGGGTGTGACAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGACAGGCTTGTCCAGCCACATGTGATTGCTCACAGCCTCCCAACTGTGAGAGGCACGAGATGCTTTAAACCTTCTAAAAACAGGTTCCTTAGAAAAGTTAGAAAACTGTTAGTATAAGTATAATGGGTTGATTAAAAATTGTATTGGTTAATTGTATTGGCTCAAACATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTATACACATTAATGAATATATAGAAGAAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAACTAAAACCCACTATACCCTCACCCTATAGGAATGTAACTTTATTTGGGTGGCATCTGTTTTAAGAATAATCACCCCTGGAGAAATAAGTGTCCTGGTTGACTGACCGCTGTCACAAGGAGAGGGTCATAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGCCCTCTGTATACATTTGTATGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCTGTGTGACTTTTGCCTAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTCCTCCAAATACTGGTCTCCCCATGTCTCTCTCTCTCTCAAACTCTGGCTGAGTCTCCATCTGGACCACGGAACCCACCAAGCTTACTAATTTTGCCTGGGCTTCTAAGATCTGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTTGGGAGAACAGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACCGAGCTATCCTTATTCTATTACTCTTTACATCTTTAATTAATATCTAATTGAAGCTATTGTATCCTGATCCTCGCCGATGCTGTCCCCGCTTCGAATACCCTGGATCAGCCGGGGCTGGACCCCGGCACAGTTTTATATTCGCGTCGGTCTTGTTGTAGTCAGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCCCTAGTAGTCTTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAAGGTGAAGAGCTGGACGTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAATCGGGAGGGATGCAGACTGCGCCTGCGCCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACGTCTGTAACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGCGCTGGTCGCTTTTTTTCTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGGCGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAACCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCATACCTAGGACTCCAAGTTGAGCAAACTGAAAGCCAGAGAACCCCCCTCAGAAGGGCTGCCTTGGTCTCAAACTGCCCACGTGGAGGTCCAAACAACTCCTGTCTCAGTACGACCTCAGACTACTCCGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAAGAACAGGTTTCTCCAATCTATCCCTGGGATTATATGCACAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTTGCCTCTTTATGAAACACCCACTGGGAGAAATAATCAGTCTGTGAGAGTTAATAAGCCTTTCTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGTTTTATGACCTCACTTGGAAGGATGTGATGTATATCTTGAGACAAACGCTGACTCCCGAGTCAAAGACTCGAATTTTGGGAAAAGCGGTTGCTTATGGAGATGAATGACTTGGTAATGCATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCAGTCCCAACTATAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACCTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGGAGGGGAAGGAAGCTCCTGGTAAATTCCTAGATAGACTGAGAGAAGGCCTTCACAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATAGCTGATGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGATAGGGAATATGAGCAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCACCATGGCTATGAAAAATGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATTTAAGCTGCCCCCGGCTCCATGTCCGGTCTGCAAGAGACCACCCTGGAAGAGAGACTGCCCCCAGAGGCATAGGTCTCCAGGGTCGGACTCTCAAGACAATCAGGACTGAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAGCCCCGGGTATCAATAATTGTGGGGGGCCAATACGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTGCTTACTGAAGCCCCTGGCCCACTTTCTTCCTGATCCGCTTCAGTAATGGGGACTGTCTGGACGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTATTTTCACACGAGTTTCTGATCGTGCCAGAATCTCCCTCACCCCTTTTGGGAAGGGATATACTGAACAAGGTCCATGCCTCTGTTTTCATGAATATGAAGCCCTTCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTTCTGTAGTTGTTAAGGTCAAAGACCCACACGTATTTCCACATAAGAAGTAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGGAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAATAAATCAAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATAAATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTCTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTTCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGGTTTGCCCCAGGGATTTCGTGACAGTCCTCACTTATTTGGACAAAGTTTGTCACAGGATCTACAAAACTTTAATAGCTCTGAAGTGGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGGCTGTGGTTACAAGGCGTCAAGAGAAAAGGCTCAGCTTTGTCAACAATTGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAAAGAATTAAACCTATACTAAATCATCCCCTACCTATGACTTTAAGACAATTGAGAGGATTTGGGGGAATCACAGGTTACTGTCGCATTTGGATTCCCGGTTATGGGGAACTTGCCCGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCGGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCGCTGAAAGGAAAGGTGTGGCACTGGGAGTTTTGACACAACCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCATGTGGATGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACCGTACTGACTTCTCATGATGTGAGTGGAATATTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAATACCAGTTATTGTTGTTAGAAGGACCAATAACTAAGCTTAAAGTTTGTGGAAATCTAAATCCTGCCACTTTCCTTCCTGAGAAGGAAAATCAAACACCTGATCACGATTGTTCTCAATTCCTAACTTTAAACTATGCAGCTCGGGAGGATCTAAAGGATACCCCACTAGACAATCCTGACATGGAAATATTTACAGATGGCAGTTCTTTTGTTCGGGATGGAAAGCGTAAAGCAGGTTACGCCGTGGTGACTGCTAAACAGGTTTTGGAAGCAAAATCTCTCCCCTAGGGAACCAGTGGTCAGTTAGCCGTGCTTGTGGCTCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCGGATGGGCCTGATAATCTATGTGAGTCTACTTCTGCTGACTCCAAAAATCCTGAGTCTGCCGTTTGAGCCTCAAGACAATGCCTTCCTGTCCTGGGCTCACTCCTACGCTGCATTCCACAATCAGTCTAACTGCTGGGTCCGTGGAGCACTCCCCTCTTCATCAGTGGAAGGCTTCTGGAGGTGGACATCTCCACTTCAAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCAACAACAGTCACATGCAATGCCTCTTCTTCATCTGATGACATCTACCAACCTTAAAATGGACTGATGCAGCACTTTGCACTTTAACTATGTACATAATGTGACTTTTAATTTCGATTTTAACTTGTTTTAATGACTGTGTTGCCTGCATCCGTAACTGTATAACTGGATTTGTTTCTAGCCGCTTGAAAGCTTTTAAGTTACAAATGGTTGCTCAAACTCCTGCTACTGCTACAGCTTCCTCCAACTACTATTTGGGGCCCCTAGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACATCCCTTGTCAGCTTGGAAGCAGTTATGGAACGAGAACAACACCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGAGAGTCATTTCCTAGGCAGGTTGATAAGGAGTCTAGGGGTTCCCAAGGGGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAACGGACAAACTTTTTTTTCTTTCTCCACATTCCTTAGGATTATATAACAATAATGTATCCTGCCTAAGGACAGTCTCTGGATTAAGGACAGTCTCTGGATTAAACCTTCTGTTATCTTAAAATGTAAATTATGGGAGTAGGTCTGACGAGGTCTTTACAACCTCCAGACATTCTTTGGATTATATAACTTCATTGTTAACACTGCTGCTGCTGCTAAGTCGCTTCAGTTGTGTCCAACTCTGTGCGACCCCATAGATGGCAGCCCACCAGGCTCTCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAATGAAGTCGCTCAGTCGTGTCTGACCTTAGCGACCCCATGGACTGCAGCCTAGCAGGCTCCTTCATCCATGGGAGTTTCCAGGCAAGAGTACCGGAGTGGGGTGCCATTGCCTTCTCCATTGTTAACACTAGCAAGCGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAATTTTATTACACAAAAGCTCTGAGCGATCAAACCTCGTCTCTGGCCCCGGATTGAGTTCTCCTCCTCCAGGGGGCCAAGAATCCCAGTGTCTTCGCGTGATTCAACAACAACCTTTCATAACTAAGGTTCCTGGATGCAGACAGATACCACGCCTCCCGTCCCCCGCCCTCCCACGGCCCCAGCAGAAGTACCCACGGTCTAAATCC TCONS_00133817 r 5' 0 TCONS_00133817 r 5' 0 EMBV3_43394 CTGCTGATCCCCAGGGACATTTAGGATGTGAGCCTTTGTGATGTTTGCCCATCTGCTGTC Gene BVT0102_328293 + 0 NULL GK000018.2:62984311-62998554 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087567 TCONS_00084763 TCONS_00087568 TCONS_00087570 TCONS_00084762 TCONS_00087569 2 XLOC_052531 XLOC_051696 Coding TCONS_00084763 XLOC_051696 NonCoding NonCoding - 18:62990417-62999124 - TSS63457 1727 2 TCONS_00084763_5 81 0.10017371163868 2 0.801860785665059 0 0 0 0 0 0 0 9.24604914648931e-05 6.03836625012449e-80 0.00116791244888584 0.000765324482567466 2.02745883590945e-05 0.00171302449303813 0.00459360042785754 0.00418049966161843 0.000369791465258107 0.00159756707713377 0 0 0 8.73615438497276e-07 5.51063626736279e-05 2.59826346245682e-112 0.000521221361450824 0 0 0 0.000274541176538822 1.05044776674665e-09 7.89546060547961e-05 XM_005219754.1 LOC101903255 PREDICTED: Bos taurus homeobox protein prophet of Pit-1-like (LOC101903255), mRNA. 0.0 2322 100.00 0.744643891140706 0 noncoding 1 0 1 1 -0.17049114701772 0.304216025388628 0.130894427571642 0.0864851974888104 GGACTTTTTAAACATCTGCTCTGTCCAGCACCATGGCGCCTGGCCACATGACGCTACTGAGCACTTGAAATGTGGTGGGTGTGACTGAAGAACTGAATGCTCTGCTTCATATACGTGTAGAGTCATTGTCTGTACCTCGTGGCTGGGTAACTACTTTATCAGCCAGTGCAGATCTAGACTGAGGGGGATCTTATTGTCTCGTTTCTACCCTTGGAACCCCAGCACCCTCAGTGCACATGGCTGTGAAAGAGCATAAAGAAGCACGCACTGGCTCTTTAAGACGCCAGCCAGGAAGTGACCCATATCACCGCTACTGGAAGCCTATTGGCTAGAACAGATATGCAGCCCCGCCCACCGGTAGATCCTGCCTGGGGACTGTGGTCAGGAAGAGGAAGAGAGGTGGAAAAAATGCATATCAGTGTGCCACTGATGGAGACCAAAAAAAAAAAGGAAAACACTGGTTGACCACAACAGATAAGGAGAGGCACTGAAATAGACAGGAAAATCAGGAAATTCTACTTCCAAAGAACATGAGTGGGAAAAGAAATGTTTGCAACACTTTAATGGTAATTAAAGTTTTATCCCCAAAAGGGATAAAATGATAAATTCAAACAAATTAAGAAAAATTAACCAAAAAATTCAAAAAATAAAAAAGGGCACTCTGCAAGTATTCCTAATGCCTAATAAACATGAGTAGGGCTCAGTTTCTCTCTCATCAAGGAATCAGTATGAAAAATCACAGAGAAGTCGCCAGACAGCAGATGGGCAAACATCACAAAGGCTCACATCCTAAATGTCCCTGGGGATCAGCAGGAGCTCTGGGCGATCGAGGCCGGTCAAGTGTCCCCTGGGAAGTTCCTGCGGGTGGCACCCACCAAAGCCAAGCGCACACCGGGAGCAGCAATTCCATGGCTGGCTTAGGAACCAGCTGAACTGCCCGCGTGTGCCCTAAATAAAGTGGCGGGGACACTCAGAGCAGCGCGACCCCCGAGGGCCGCTTCTCGGCGAACACAAATGACCCCCTCCGCAGGCTGGATACACTTAGGTGCGTCTCTCCCGACAGTGACTAGCCGTTACTTGGTGATTGGCCAAGCCGCCAGGGTTTCTGCACCCCAGTGCAGGCCAAGGTCTGCAGGACTTTGCTGGGACAGATGACTCTATAGATTCAGACACTGCTGGGGGCCGGAGTCGTTCTCATCCGCAGAGACATCTCCCTTTTGGTACTCCGAGAACAAGACGGAGGGAGGTTCGTGGGATGGTTCTTGGAGCGGGAAGAGGTCTGTGAAATCAAAGATGACAACAGAGTCTGGCAAGGAGTCCGAAGCGGCGCAGGGGTCCTGAACCCAGTCTGGAGTCGGGGCTGAAGTCAGACCTGGGGTCGAGGCTGGAGCTGCCATAGGGAAGCCGTCCTGGGCGCCCTGCGCCAGGGCGCAGCTGGCCTGGCCTTGGCTAGGGACGCCGCCGGGTGCTGGTGCGCTGAGCATGCTGGCGGGGCTGGGCGGAGAGGGGCTGCGGAACCCCGGGCCTTCTGGGGGCGCAGAGACTGCAGCCGCGGCGGCAGGGATAGAGGCAGTCCTGGGAGCGGGGTCGTCGGGAACTCCGCCGTCGGTGGAAGCGCTGCGGGAACCCTGGCCAGGCCCCTGGGTCAATCGCTTCAGCCGAGCGTTTTTGGCCCGGCGGTTCTTGAACCACACCTGGGGAGACAGAGGGGCCGGGGAGGAGGCGTC TCONS_00087566 r 5' 6108 TCONS_00087566 r 5' 6108 EMBV3_35518 GAGCAAGGCTATGACGTCATTGCCTACCTGAACCAAGCGCCTCCAGGCCTCTACACAAAG Variant GeneID:280726|ASS1:NM_173892:461_cdna 149^640 1 EMBV3_07227 GeneID:280726 11 GENE ASS1 ASS argininosuccinate synthetase 1 EMBV3_10861 ATCACAAAGACAGATCCAACGACAGTCACCACCGCTACCTCAGCGTGGGCCGGAGCCTTT Gene GeneID:781333|VGLL3:XM_002684660:1_cdna Constitutive 0 NULL GeneID:781333 1 GENE VGLL3 NULL vestigial like 3 (Drosophila) EMBV3_14932 CTTGCTTCTTGTTGGGGATGTGGCTCAGGCTGCGGACGTTGCTATTGAACACCGGAATGA Gene GeneID:505361|VPS16:NM_001015522:874_cdna Constitutive 1 NULL GeneID:505361 13 GENE VPS16 VPS16A vacuolar protein sorting 16 homolog (S. cerevisiae) EMBV3_01383 AAAAACGAATCCAGTTGTGCAGCCCATAAGAAAGCAATTGAACTGAACCCTAAAGACGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06030 TACACTGTGATTGCCCCCATGCTGAACCCTCTCATCTACACCCTGAGAAACATGGAGATG Gene GeneID:531024|LOC531024:XM_002683835:4_cdna Constitutive 0 NULL GeneID:531024 28 GENE LOC531024 NULL similar to olfactory receptor 1200 EMBV3_38692 GCAAGGCTTCTTCAACAACCACAGCAAAGTGGACCCTTGAGTGACCCAGAATTCCAAGAG Gene BVT0102_083297 + 1 EMBV3_40765 GK000027.2:13691048-13754642 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155033 TCONS_00155924 TCONS_00155926 TCONS_00155925 TCONS_00155927 TCONS_00155923 TCONS_00155928 TCONS_00155922 TCONS_00155035 2 XLOC_094624 XLOC_094888 Coding TCONS_00155924 XLOC_094888 Coding Coding ENPP6 27:13745874-13766318 j TSS116590 4282 1 TCONS_00155924_1 197 0.103689864549276 4 0.790735214988015 1.25770403614756e-08 3.80023884343095e-10 5.40007628315891e-08 1.70617741167418e-20 0.000219566662258268 5.37157436235617e-10 3.59028182943992e-05 1.07116813559936e-18 1.46294376427975e-13 0.000600096304080084 0.000383969610647261 9.59687033714866e-05 4.04786732862231e-06 0 9.54635900061977e-06 0.00165964951447316 0.000707900177428969 3.99350073288884e-07 0.000307757358953935 1.27386123160442e-55 1.3080381370925e-06 2.70888314474299e-10 1.41724762878257e-05 0.000757556847847609 2.78440176148125e-11 3.81091252115929e-05 8.37568356819907e-27 9.11595083481193e-52 6.40270920001385e-05 0.000297710794689105 XM_005197176.1 ENPP6 PREDICTED: Bos taurus ectonucleotide pyrophosphatase/phosphodiesterase 6 (ENPP6), transcript variant X1, 0.0 7685 99.79 0.999766464269033 NM_153343.3 ENPP6 Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 6 (ENPP6), mRNA. 7e-131 473 83.71 0.10415693601121 TCONS_00155924_1 sp|F1N5C8|ENPP6_BOVIN ENPP6_BOVIN Ectonucleotide pyrophosphatase/phosphodiesterase family member 6; 3e-114 337 99.38 0.812182741116751 1 coding 1 0 1 1 -0.00579827887986262 0.960683261767219 0.00367291585699497 0.943825924497969 CACTGGCAGCTCCCGCAGTCGACGGCTTCTTGCAAAGAAGTTCTGTTTTGCGGGCATGGAGCACCATCCATGTCTCCAACTTGGCACCTGGACCCCAGGATGTGAGAGCATCAGCGGCTCGCGAGCTGGGAAGAGCTTCTTGCTTCCAGTGTGGTGTGTACGTCAGATATATAACAAAGTGAGGCGAGTGGAGCACATGACTGTCTACGCGAAGGAAGACATTCCGAGCAGGTTCTATTACAAGAAAGGGAAGTTTGTCTCCCCTCTGACCCTAGTGGCCGATGAAGGATGGTTCATAACTGAGAATCGAGAGTCGCTTCCATTCTGGATGAACAGCACCGTCACCCGCAAGCCAGAAGGCTGGCAATGGGGCTGGCACGGATACGACAACGAGCTCAGAGCCATGAGGGGCATCTTCCTGGCCTTCGGACCTGATTTCAAATCCGACTTCAGAGCCGCTCCCATCCGAGTCGTGGATATCTACAACCTCATGTGCAAGGTGACAGGCGTCACCCCCCTGCCCAACAACGGGTCCTGGTCCCGGGTGATGTGCATGCTGAAGGACCCAGCCAGCTCGGCTCCGGGTGCCCCGCCCTGCGCCTGTGCACTGGTCACCGTCCTGCTGGTACTGCTGGCGATACTGGCCTAGCTGCTTGCGGCGTGTCCCCAGCACTCCGCACAGTGGGTGAATTAACCACCTCGATTCATGCGAAGACATACAACTGTTAATCTATTCTTGGATGATTCCATACACAAAAGTCCCTATTTCTTTAGATTTTTTTTTTGTTTATATTTTCTAGAGGTAAGGAAAATTTTAGCTTTTCATTTGTTCAACTATAGGTTATTTTCTTCTTCTTTTTTTTTTTCTGATGTACTCAGATGGCTTGTCTGAACAGGGCCTCCCGCTGTAGTGACCAGACCCCAGGTGGGTATTCTATGGAGTCCTGGTCCCTCTGTTTTGCACAAAGCAGGCTCTTGTCTAGGGTCTGTCTACACCTGGGAGCCATCCTGTACAGCTCCTTCCATCAGGGGGAAAACGGAGGCCCATTTGAAAGCAGTAGCTGCTGTCTATTTCTGACCCAGCTCGTGACGTTTCTTCACCTTATACAAAGTCCCAGAAAGGGAGTATCTTAGCTTGGCTCACCCATCAGTCAAACTCACTAAGAATTGCAGAATTCAGAGAACAAAGTGAAAGATATGGGTTCCTTCCCAAAGTCTGAGTACACAAAATTTTCTCCCTGGGTGGAGGAGCAAAAGAGTTTACCATAGATACGGGCTTCGACAAGCCTTCTCCTAGCATGTTCGCGGTGTGAACACACAGGACAGGAACTGGATTGCCCGTCTGCCCATCTGCCTGTGGGAAGGCTGACTCAGAGGATCCCATATAGAATGTGAGCGCGTGCTCAACCACTTCAGTCATGTCTGACTCTGTGCAACCCCATGGACTGTAGCCTGCAGACTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTACTCTAAGGAATCTTCCCAACCCAGGGATCAAACCTGGGTCTCTTACATCTTCTGCGTTAGCAGGTGGGTTCTTTACCACTAGTGCTACCATAAACTCCAGCAACACCGGACATATCATCTATCATCACAGGTGGGGAAAGGGATGTCCGGCTGAGGAGTGTGGACATACTTGCAGAAATCTCACTCCATTGCTTGAAATGGTGACGTATTGAACATAAGTTTGATGCTCCTGTGTCCCTGAAAGCAAGGCTTCTTCAACAACCACAGCAAAGTGGACCCTTGAGTGACCCAGAATTCCAAGAAAAATGGTGCAGCGCAGGGAACAGACTCAGCATGATGCAACTGAATCCCAGTCACTAACCACTTGGCCATGTGATTAGGTAACAGTTTGGGCAAAGTGACACCTCAGAGACCTTGGTTTTTAAGAAACCCCAAAGAAGAGGCACTGAGCCTGAGTTGAAATGTTTTTAGTCTTCTAAGTCTGCTATAGGAGATCTTGTTGCAAGACAAGGGATACCTATACTTCTATATGATCAGAGTCACAGACATGTATCACTGCATTAAAAATGAGTTTGCACTAAATGAAGCCCACCTGCAGATGAGACTTTTCATCAAGAAAAGACAACACATCAGGTCTCACCAGGACAATAAAGCCTCAGACAATAAACACTCTGCTTATGTGTTGTTTACCTTGAAAAAATGAAAATCTACGCTCACCCTGATTCAAGAAGTCTGGGAGCCATCTCCAGACCTTGAATCATGAGAGCGAAGGATCACTGCTTAAAAATACCACATTTATCTTCACAAAAGATTTCTAAGGTTTTATGTAATGTGTTTTTAAAGTGCTAGCAAACCTTCAAGTCAATAGGAAAGGCAAATCAGCCTTTGTTATCTGTCTGAAAGCCAATTAGTGCTTTGGGAACACTGTGGTGGTTACTGAAAGAGCATCTATTGTTTGAAGTTGTCTTTCTCTGTAAAGGACTGTGTTCTAATTAATGCGGTGGAGCTCATTGTGCTCCCATGTGAAGGAAGGAGCCCTAAAAGAAACCCAGTGATTCAACTAAAAGTGGATTATCCAAGTCTAGAGGGGTACGAACAGATATACGGTCTTGAGTTTGTCCTTCCCACTCTGTTCTACCAATTTTTCCCCTCACTCATTTTTAAAATCTTCAAGTTACATAGTAATATCTCAGACATTTGCCTGACAAGGTGTAGTTACTCTGTAAGTGGTTTTGAAGCTCCAGTACTTCGCCCACCTGATACAAAGAGCTGACTCTTTAGAAAACACCCCGATGCTGGGAAAGATTGAAGGAAGGAGAAGGGGATGACAGACAATGAGATGGTTGGATGGCATCGCCAACTCAACGGACATGAGTTTGAGCAAATGCTGGGAGACGGTGAAGGGCTGGGGAGCCTGGCGTGCTGCAGCCCATGGGGTCGAGAAGAGTCGGACACGACTGAGCAACTGAACAACAACAAAAATGAGAATAAGACACTTTGGAATCATAAGTATTGGTGATTAATAAAGAAAATTCAGACACTGAATGGAGGAAAACCCTTAAACCTAAAGCAATACATATGTTTTAGTGGCTTAACTGTTTAGCTAGAATTTTTTCTTTTGATTTTTGTTCTAACTTATGTTCTTTTCCCAAGGAAAATTCTACTTTTTCTAAACGCATTTTGTTCCATCAGAGTAACATTTGCTAGGACTATACACACAATTTTCCTCCTATTTTACAACTTCATCGCTAATTCCGGGAGGAAGTTCATTGGACTGACCTGAAAATACCAAAGACAGGTGAAAGGCGTGATGTTTAAGTTGAAGACAAGATGAATGGCTACTGCCTGCCTGTATGCAGAATCACCCGAACCCAACTCAACTACGTTCTGAAGACTTCAGCATAAATTAGAGCAGGCCCAGGGAATTCTTTCTCACCTCCAAGAGGCCTGATTTACAAAGTCCCAACTCTCTTTACTTTTAAAGGGCTCTTCAAAAGCCACAGCACATCTGAATTGTCATAGACAGCAGTTTGCAAACCTTCTGGGATGGCCAGCATCCCTGGCCCTCTTCTGGAGATGCAGGTTCTGAAGACCTGGCACGGGGCCTTCAACAACACTTTTAAGTCACGTGGATCTAAGGTCCGGGTTTGCCCTAAGGAGTGGTGGGTTCTGATTTGACTTTGGTAGACCCGAGGCTCCCACAGCAACTTCATGATCTGCCAGTCTCTTCAGGGGCCATCAGCCTTGCATCGGGCTGATCCAGCTGATGGCCTGATCCCAGCTGGGTCAGCTTCCCGCCCTCCTAAAACCAAAGCAGATCTGTAAGTCCTGGTGGTGAAATGGCTTTTCCATACCCAATCCCCTTGAGTTTAAGATCCTCAACGGTGCTATCAGACAAACTCGTTGTTCAAGACACGCAGCTCTTTTACGAATTTTCTATGAAAGTGTTTTACATGTCTGTAAATCTCAAGAGATTTCCAAACGTGATTACGTGTTTAATCTTTGTAAGTGATTGGTGATAGACCAACATCAGCTCTTGTAAGCTACTTGTGAGGAGGAAGAAAGATGGTAGGCTCGACAGCCTAGTTATAAACCACAGGAAGCTCGGTCTCAGGGCTGTGTGATGGAAGATATGCTTATGTGTTGCTTTGAAATCATAAAATTGCACCTGGTGTCGTGCCTCACATGTTTCGTAAATGTCCCATAAATGTGTTGAATGAAAAAAAGAATAAATAAAACTGAGGAGACTTGCTTACACAGCACATA EMBV3_13609 GGAAGTTGTTTAGAACCTGGCCCCATCTCCTCCATTCAGTTTGTGTTCTGACAATGACTC Gene BVT0101_010291 + 1 EMBV3_17162 GK000002.2:127720330-127773926 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04218 GCGTTCATGGCTTCCCTGGCAACTCACTTCACCAATCAGAACAGTGGGATCATTTTCAGC Gene GeneID:531659|C1QTNF3:NM_001101138:45_cdna UTR3_Alt 2 NULL GeneID:531659 20 GENE C1QTNF3 NULL C1q and tumor necrosis factor related protein 3 EMBV3_21812 GGTAACCTGAGGGTGCTGGGAAGGGAGAAGGATTCGTGTGTTTTGTTCAGAGTATGGTAA Gene GeneID:286815|GCH1:XM_002690949:298_cdna UTR3_Alt 3 NULL GeneID:286815 10 GENE GCH1 NULL GTP cyclohydrolase 1 EMBV3_34509 CAGCTGCAGTTGAAGGCTTTAACTTTGCACACTTTGGGGGCCACAGTCGCGTCATTGTAT Gene GeneID:504305|IMPDH1:NM_001077841:152_cdna Constitutive 0 NULL GeneID:504305 4 GENE IMPDH1 NULL IMP (inosine monophosphate) dehydrogenase 1 EMBV3_31013 ATACCAAATATTGGAAATGGGATAAAGGCCTGGGGAGCAGCTGTGGGCACATCCAGTGTG Gene GeneID:535075|ALDH1A2:XM_002690855:208_cdna Constitutive 0 NULL GeneID:535075 10 GENE ALDH1A2 NULL aldehyde dehydrogenase 1 family, member A2 EMBV3_11202 TGTTGCCTTGCGATAATCCAGCCTACTATAATGTGGAACAATATCCATCCTAGCAGGTGG Gene BVT0102_112604 - 0 NULL GK000022.2:6728247-6788597 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125845 TCONS_00125842 1 XLOC_077318 Coding TCONS_00125842 XLOC_077318 Coding Coding GPD1L 22:6666776-6731348 = TSS94557 4528 1 TCONS_00125842_3 351 0.107111307420495 8 0.929999535395146 4.0445402267136e-09 2.29468403796685e-09 9.23865701960811e-134 1.97194950525415e-05 1.13906258317066e-08 8.45263254765262e-57 3.66566303187048e-06 7.43062580550909e-06 4.01090080104147e-25 0.00492564555283124 0.00163337956858206 0.000413966489726135 2.46362035619451e-18 1.48717154269412e-05 2.6201914825581e-12 0.0246287756568118 0.0172682780756925 0.0281965084437014 1.59819875195469e-20 8.20375268211423e-12 1.40380768814167e-31 0.0278275803103829 0.0119972621079181 0.0213413039938158 2.40272696562825e-05 9.59534741274115e-115 6.44425197710818e-34 0.00401405818670096 0.00253546010697289 0.00798433370263019 NM_001100363.2 GPD1L Bos taurus glycerol-3-phosphate dehydrogenase 1-like (GPD1L), mRNA. 0.0 2572 99.93 0.315371024734982 NM_015141.3 GPD1L Homo sapiens glycerol-3-phosphate dehydrogenase 1-like (GPD1L), 0.0 2839 76.25 0.853136042402827 TCONS_00125842_3 sp|Q8N335|GPD1L_HUMAN GPD1L_HUMAN Glycerol-3-phosphate dehydrogenase 1-like protein; 0.0 704 97.43 0.994301994301994 2 coding 0 0 0 0 -0.0614799306176046 0.723057552748562 0.062461119115859 0.278565852926924 GGCCGCCGTGCGCCGCAGCGGGTTCATGCCGAGCGGGTGGAGGCGGGCAGCCGACCTGGGAGGCGCGCTCCGGTCTGCAGCGTTCGGCCTGAACCATGGCAGCGGCGCCCCTGAAAGTGTGCATCGTGGGCTCGGGGAACTGGGGTTCAGCTGTTGCAAAAATAATTGGTAATAATGTCAGGAAACTTCAGAAGTTTGCCTCCACGGTCAAGATGTGGGTCTTTGAAGAAACAGTTAATGGGAGAAAACTGACAGACATCATAAATAATGACCACGAAAATGTGAAATATCTCCCTGGACACAAGCTGCCAGAAAATGTGGTTGCCGTCGCGAACCTCAGCGAGGCCGTGCAGGACGCAGACCTGCTGGTGTTTGTCATCCCCCACCAGTTCATCCACCGGATCTGCGACGAGATCACGGGGAGGGTGCCGAAGGATGCTCTGGGCATCACCCTCATCAAGGGCATAGACGAGGGTCCTGAGGGGCTGAAGCTCATTTCTGACATCATCCGAGAGAAGATGGGCATTGACATCAGCGTGCTGATGGGAGCTAACATTGCCAACGAGGTGGCCGCCGGCAAGTTCTGCGAGACCACCATCGGCAGCAAGATAATGGAGAATGGCCTTCTCTTCAAAGAACTTCTGCAGACTCCAAATTTTCGAATTACGGTGGTGGATGATGCAGACACGGTTGAACTGTGTGGTGCCCTGAAGAACATCGTGGCCGTAGGCGCCGGGTTCTGTGACGGCCTCCTCTGTGGCGACAACACGAAAGCCGCCGTCATCCGCCTGGGGCTCATGGAGATGATTGCCTTTGCCCGGATCTTCTGCAAAGGCCAGGTGTCCACGGCCACGTTCCTGGAGAGCTGCGGCGTGGCCGATCTCATCACCACCTGCTACGGGGGCCGGAACCGCAAGGTGGCCGAGGCCTTCGCCAGGACTGGCAAGACCATCGAAGAACTGGAGAAGGAGATGCTGAATGGACAGAAGCTGCAAGGACCTCAGACTTCAGCCGAGGTGTACCGCATCCTCAAACAGAAGGGGCTGCTCGACAAGTTTCCATTGTTCACTGCAGTGTACCAGATCTGCTATGAAGGCCGGCCCGTTCAAGAGATGTTGTCTTGTCTCCAGAGCCATCCAGAGCATATATAGAGTGAATCATGCAACCTATCAGGAAACGGCCTGCCTTTTGTATCAGACATTTAGAATGGTGGAAACCAGGACTTGGCAACAAAGATGTATGCTTGACTGTCATCCCATCGTGGATGTGTATGAATTTTTACCAGGTTCACTTTTGAATTGCAAGATGAAGTTCATTGGCTAAGATGTTACCGGGCAACATCTAGACGCACATATGTGACCATGTGAGTGTGTGTTCCTTTCTCATTCTATGGATGTTTCTATGAACCAAAATTAAAGGCCCTTTTTAAAAAATCACTTTTGAAATTTTCCCACCGAGGTAGCATACAAGATTGGAACTATCGCAGCTAAAAGTTTTGAGTTTCACCAAAGGATTTTTTTTTCTCATTCTCAAGGTTAAAATGTAACAAGCATTATTAACATGGCAGAGTAGATGAGTGAGGGGGTTCAAAGATCAACACACTGTAACTTAAACACTATCTCAGAGCCAGCATAATTAACTACTTCAATTGTGGGTTGATCTTTTTTTTAAAGTAATTACATATTTTGATTAGGTAATCCACTCATCTGTATATTCCACTCATTGCAGTTTTCTGCACTTTTAGCCTCTTTTCTCTTTGTTAGCTACCAGAATGTACTTGGGTAAAGGCACAGCAGTGGCGGAAGGCCAAGAACTCACCTGGGATGTTCCTGCTGCGTTCTGATTAGCTACCGTGGTGTGATGCTTCTTGTCAGGTTGTACTTTCGTTCACACATTTCCTGTAAGCCTCACAGATCCCCTGAAAGGGGGCAGCTGTTACTCTTCTTCTAAGGTACAGTCTCCGTGCCTGGTCATCTGACGAGAAGGGCCAGATCCAGAGGCTCAGCCGTCACTGGCCTGGTTTGAACTCCCGCTGATTGGTCGTAGCAGATGCTGTCCCCAGGCTTTCTTGAGGGCGTGGGCAGCTTTCTGCAGTTGAGGCTTGTATGGGTCCTTGTCTAGAAGGATTCACTCCGTGTGGACCTCACTCCATTCGCTCCACTTGGAGTCTCTTGGAAACATAGGTTCCCAGGTCCCTCCCCGACCCCAGCCTCTGAAGTGAGGTCTTGTATCTCTGTCTTGACATGCCTTCTGTGTGTTTCAATGCTGTCTACTGTCTGAGAACCACTACTGTAGAAAATTTATTATTTAGATTAGCATTTCTCAAACCACGTTCCACAGGAAACCAGTGTCCCAGGATCCAGTAGTGGTCCTGGTGTTCCCTGGCAAGATCCAGTGAGTTTGGGAAAAGCCCTGTCTGTACACCCCTCCTGAAGGGATAGACTGTGTGTTCATAGAACATGCTTATTTAACCCGGCAAGTCCCAGACAGATTACGCAGATGTTTTTTTTTTTTGGCAAGGAAACTTACCAAAGTTTCCAAGGAACACTATTCCAGACTGAGGCAACCACAGGACAGTGCAAGTATATTCACTGTCTGTGAGAAATGAGAATGAATGACTGCCTGTGGTATTGTTCATTCGCACCTTTATATAAAGTTCAGGTCTGCCACAGTCTTCGCTGAAGCTTTAAGGCGACACTTTCAGGTACAGCCAAGTGGATGTCAACTTCGCTGAAACGCACACTGTGTGGACTAAGTGCTTTTAATTCTAGAATTAGAACGGAAATTACTGTATCTTTGTAAATGTGATTGGATTCAAGATAGCACTGCGGTTACCTTACATGGTAGTGAATGAGTGTTAAGGAAATGTATGAATGTCTTTTACATTTTCATGGATTTTTCAATCACTTCGAGATCTTGACCTTTTTTATTTTCCAGCTTGGGATTTTTTTCCCCTTCTATATCTGGGATGATTGTAAACTAGATTTTTTTTTTGGTGGGAATTTTAAAAACTTCTATACATAGAAGAATACGAAAGCACACAAAATGCTATGTTTCATCGATTTTAGTGCCACTGTTAATCAACTTTTGCTTGTCTCATAATTAATCTTTTTAAAAGTTTGTACATAAGTAACAAAGTTACTTTTTAAGATACATAAAGGGCTGTAAGCTAATCGTGGTGTCTGTCAAGTAGCATCATCAGATGTGAGGATTCGGATTTTTGTCTTGTGTATGTTCTTCATCTGCATTCAGCTTCCGACTCTGGGTTTTGTACTTGAGTGTTTTTTCTTTAAAAATGCCTTCTCACCCTTCTCAAGTCTTCTGACTGTACCTTTTGAACATACTTATGATATTCTGCACATATAGAAAAAGGTAAATTTTATATAAGTTTATGCTTTGCTAACTGTAGATATTTATTACTCTACGAGTTATATATTTTTATAACCACCTGTGGTCCATCATTTATTTTAATTCACCTTTCTTACTACTAATTATGGTAATTTGGGAGGGAAACATCTAGAAAAGAAGCTTAACTTATATTGTATCAGCCAAATCTGTGAATGTAAAAACTACACTGTTGCCTTGCGATAATCCAGCCTACTATAATGTGGAACAATATCCATCCTAGCAGGTGGAATTAAGCTAAACTCCTTCTGGTTTTTATTTAAGTCTTAGCTATCATGTGGCCCCATGGCATCGGCCCAGGGAGTGATGAGATGCCTCTGTACCAAGGAATCTTCGGTTTCTTCCACTAGCTCTTATCTAAGAGCCTTTTACCTACACATGTACTACGTTTGTTTACAGACTGTAGGTGGATATGATTTAAAAGCTTGATTTAATAAAAATTGAATCCCCCCAAACCTGTGCTACTGATCCTATTTTTTTTAAATCAGCTTATGTGATGGTTTTATTTGTTTAGGTAGTCTCTTTTATTTCTCTCCCCAAATTGTGTTACCTTGACAACAATAAAAAGGCAAATTTTAAAAGAAGGGCTTCATCTCTAATGCGTTCCTCAAAAACACATCTGCTTCCATTTGTCGATGGGTGTTCCTTTCCATTGCTTGCTGATATTTTTATGGAATTACAAGCATAGGATGGAGGCCTTCTCCTTCCACCCATTCGGTGGATTAAATGTGAGGGTGAAAGGTTGTTGCTGAACCATAGAAGATGCTGGGATTCTTGGCCTCCGGAGGAGAAGAATTCAATCCAGGGCCAGAAGTGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAGGGTTTAGAGAAAGCTTCTGACACAGACATCAGAAGGGGCAGAAAGAATGCCCCCTTGCTACTGTTAGCAATGGAGTTATATACTTTTTAATTACTTATTACAGTGAATCAAAAGAATGGAGGTTGTAAAGACCTCACTAGACCCACTCCCGTAATTTCAAGATAACAGCATTAGCTGTAAGGTTTTTTCCAGAAACTGTACTCAAGCAGGATACATTATTGTTATATAATCCTAAGGAATGTAGACGAAAAAAAAAAAAAACGTTTGTCCTTTCC EMBV3_06847 CTGTGTTACAGCTCGGAGTGAGCAATGAAGATTCGAAGAGCCTGCAGAAAGTTCTTGTGG Gene GeneID:538706|COMMD10:NM_001083489:14_cdna UTR3_Alt 2 NULL GeneID:538706 7 GENE COMMD10 MGC137858 COMM domain containing 10 EMBV3_39067 ACGCCCCCCTGCACCCCTCAAGAGCTTGGGAAGCCTGGGTCCAACAAGAACTATTTATTA Gene GeneID:788823|LOC788823:XM_002696024:471_cdna Constitutive 0 NULL GeneID:788823 19 GENE LOC788823 NULL similar to nucleolar protein No55 EMBV3_25071 TCCACAGAGAAACTAAAGTAGGACGCTCCTTCTGAATTTTCGTCACGGTGACTTCAGGTC Gene BVT0101_073229 + 0 NULL GK000018.2:46345913-46358552 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086315 1 XLOC_052120 NonCoding TCONS_00086315 XLOC_052120 NonCoding NonCoding - 18:46355441-46356544 - TSS64257 378 1 TCONS_00086315_1 40 3 0.659709618874773 0 0 4.89628805685553e-05 0 0 0 0 0 0 0 0 0 0 0 0 0.000978205389666284 4.39214646397255e-05 0 0 0 0.000160620169193185 0.000588941670202005 0 0.00204014163372622 0 7.45552895492971e-05 0 7.6231520446535e-05 0.000192643073378827 0.000524878128491023 NM_001082463.1 DMKN Bos taurus dermokine (DMKN), mRNA. 0.0 679 100.00 0.992063492063492 NM_001035516.3 DMKN Homo sapiens dermokine (DMKN), transcript variant 1, mRNA. 2e-49 199 73.39 0.965608465608466 0 noncoding 0 0 0 0 -0.117801918526288 0.458086402995269 0.00179511673648937 0.970133303879104 AGTCACGGTTTCTTCCTCGGCTTCCCGGACATACCCTGGCCTGCTGCAGTGGGTGAAGTTTTGGTAGGCAAGCACTTCCGACCGCGACTGAGGCCCTGAGAAACATGGGTTGTCAAGGGACCAGACTGTGCCCGGGCCCCAGCTCTTGGTCTGAGCGCCAACACCTGCCTTTTCTAGCTTGGGGTCCTGCCTGCCTGTCCCTTGTCTCCCCCCACACACTGTGGTGATGTCTCCTTGACCACCAGTCTCAGTGGGTACCCCAGCTGTTTCTTCACCAGCTCCATTTTGTGACCTGAAGTCACCGTGACGAAAATTCAGAAGGAGCGTCCTACTTTAGTTTCTCTGTGGAAATAAAACAGGAATCTTGTATCCCTAATA TCONS_00083414 r 5' 2801 TCONS_00083414 r 5' 2009 EMBV3_03223 AAAGGTGAGATTGCAACCCCTACAAGGACCCCTCTATCCTTTGGAAGGCGCACTGCTGCT Gene GeneID:281962|OVGP1:NM_001080216:23_cdna Constitutive 0 NULL GeneID:281962 3 GENE OVGP1 NULL oviductal glycoprotein 1, 120kDa EMBV3_08571 ACCACAATGCTGACTCATTCATTCATGTCTTCCACCCCCACATAAAGTAAACAGTGCTCC Gene BVV0102_449083 + 0 NULL GK000023.2:20384230-20410837 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39858 CAGCCTGGATGCCTCCCATATGATCTCTATCCATCACCCTCCAGACAGTTCCAGAGAGCT Gene GeneID:531531|SLC16A5:XM_002696182:172_cdna Constitutive 0 NULL GeneID:531531 19 GENE SLC16A5 NULL solute carrier family 16, member 5 (monocarboxylic acid transporter 6) EMBV3_09927 TCTTGCTCTCCGCCAAAGCCACCCGCCTCGACCCTCCTTTTAGTTTCCACCCGGTCTTCA Gene BVT0102_101819 + 0 NULL GK000006.2:46895399-46975913 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208302 1 XLOC_126815 NonCoding TCONS_00208302 XLOC_126815 NonCoding NonCoding - 6:46897594-46898297 - TSS155809 703 1 TCONS_00208302_2 88 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.05557097057586e-05 0.00023489797316242 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.19554733164966 0.123752745842124 0.00187912382383459 0.983157182473713 ATGAGTTGGTTTTAAATAATAGGTTACTGCCATTTAGTTGATGACTAAAGCAGAAGCCAAGAAGTGTGCAAATTGTAAACGGAACATGCATGAGCCGAGTGTGTTCTCTGAAATAATGCTCAAGACGCAGCTGAAGTCTCCACTCTGGCGGTAAGCGTGTTACAAAGAACTAGATTTCTTTCTGGCATCCGCAACTTGGCAGGAGTGATCATGGAGGAGTTGAAGAGCGCTGGAAATACTAGGCTCCTCGCCCGATGCGTCCGCACAAAACGGTCCGGGCCATGAAGACCGGGTGGAAACTAAAAGGAGGGTCGAGGCGGGTGGCTTTGGCGGAGAGCAAGAGGCGAAGTTGGGTACGGGAAGGAAAGGAGCCGCGAGAAGATTGTCAGGGAAGCCCAGGACTGGCGGGGAGGGGGCTGGAGAGCCGTGCGCTGCAGGGAGGGAGGAGACGCGGGGAGCGAGGCTCCCAGGTGAAGTGGGGAACAGGACCGGGTCTCCAGAGGAATCTGACTCGGGTCTAGAGCGGGTCTCGGAGGAAGAGGAACGGATCCCGGCGAGAGTGCAGCGCCGCAAGTCCGGTCCACGCACCCGTCTCTACACCCCGGGTACCCATCCCAGGTGCCGGGAGCGCCCGGGCTGCGGCGGCGAGGAAGAGACAAAACTAGCCGCGCCGTACCCGCCCGCGAGGCGGAGGTCCCTGGTC TCONS_00205089 TCONS_00205090 . 5' 16064 TCONS_00205089 TCONS_00205090 . 5' 16064 EMBV3_43737 CAGCACTCTTGGAGGAAGCACCCTGGTAATTGCTTTTGTTCCAGGAGCTGAGATGTCCCA Gene GeneID:531419|CASP2:NM_001144104:697_cdna Constitutive 0 NULL GeneID:531419 4 GENE CASP2 NULL caspase 2, apoptosis-related cysteine peptidase EMBV3_21893 AATGGCTACCCACTTCAGTGTTCTTGCCTGGAGAATTCCATTGACAGAGGAGCCTAGCAG Gene GeneID:281376|SERPINB2:XM_002697669:145_cdna Constitutive 0 NULL GeneID:281376 24 GENE SERPINB2 PAI2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 EMBV3_32524 ACTTGCTCATCAGCACCTACCCCAAGTCGGGTGTTGAGCTTCTGAAAGATACACCAGCCC Variant GeneID:282485|SULT1A1:NM_177521:227_cdna 180^305 1 EMBV3_36086 GeneID:282485 25 GENE SULT1A1 MGC127219 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 EMBV3_43225 GCTAACTGGAGGAGAAGACGCACAGTTGTTACTTTGGAAACCTGGAGCAGTAGAGAAGAC Gene GeneID:539045|WDR89:NM_001034658:184_cdna Constitutive 1 NULL GeneID:539045 10 GENE WDR89 MGC128803 WD repeat domain 89 EMBV3_29674 TCCTTGTGTTCCCCAAGATGCCCTGTGCTTTCCCCAACAAAGCCTTGCCCATGAGAATAC Gene GeneID:515732|PHKA2:XM_002700367:5_cdna Constitutive 0 NULL GeneID:515732 X GENE PHKA2 NULL phosphorylase kinase, alpha 2 (liver) EMBV3_07524 AATCGCTGGGCTCCGCTCTTCTGCTGGAAGTTTGACTCACTTTGACCTGTTCGACCTAGT Gene GeneID:783600|LOC783600:XM_002685071:197_cdna Constitutive 0 NULL GeneID:783600 1 GENE LOC783600 NULL hypothetical LOC783600 EMBV3_32736 GAGGTTGCTGGAGCATTCCCATTCTTCCCAGGATTTGCATGCATTTCTCATGATCCTGCA Gene GeneID:493709|ATP5S:NM_001007812:34_cdna UTR3_Alt 2 NULL GeneID:493709 10 GENE ATP5S MGC133848 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) EMBV3_18139 CAGAAAAATCACCAGTTCTTGGACGACTGTGTGGGAACAAGATACCAGAGCCCCTTGTGG Gene GeneID:616468|TLL1:XM_002694308:5_cdna Constitutive 0 NULL GeneID:616468 17 GENE TLL1 TLL2 tolloid-like 1 EMBV3_00909 AGTGTCAAGTCATCAAAAAGAAGGAATGAGAAGTTGTCATATGCCCAAGGAGTCTAAAGG Gene BVV0101_054669 + 1 EMBV3_39241 GK000001.2:125740149-125862997 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29509 TCAGCTTGGCTGTTGGGAATTAGGTCAGGTTGACTCTGTATGTGTTTGACCTGCACCCTC Gene GeneID:527214|PLA2G12A:NM_001098063:53_cdna UTR3_Alt 2 NULL GeneID:527214 6 GENE PLA2G12A MGC155183 phospholipase A2, group XIIA EMBV3_12393 ATAGGCAGCCAGAGCCGGAAGGGGACAATCGCAGCCCCAGAGAGACATTATCTATAAAAA Gene BVT0102_285429 + 1 EMBV3_28728 GK000026.2:15070688-15096224 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00206812 TCONS_00231338 TCONS_00066283 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00177370 TCONS_00175855 TCONS_00169198 TCONS_00175580 TCONS_00250930 TCONS_00008224 TCONS_00021569 TCONS_00137878 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00038458 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00062744 TCONS_00109027 TCONS_00155780 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00064462 TCONS_00178325 TCONS_00167260 TCONS_00010054 TCONS_00040836 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00110323 TCONS_00063486 TCONS_00207365 TCONS_00020756 TCONS_00249772 TCONS_00010471 TCONS_00088088 TCONS_00021595 TCONS_00157613 TCONS_00117619 TCONS_00199424 TCONS_00155778 TCONS_00161835 TCONS_00071033 TCONS_00059708 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00249569 TCONS_00116665 TCONS_00250579 TCONS_00249087 TCONS_00231612 TCONS_00070810 TCONS_00222114 TCONS_00107832 TCONS_00131550 TCONS_00199037 TCONS_00122479 TCONS_00122686 TCONS_00157036 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00252353 TCONS_00224113 TCONS_00007677 TCONS_00197928 TCONS_00229957 TCONS_00116100 TCONS_00250720 TCONS_00169197 TCONS_00038381 TCONS_00222766 TCONS_00242885 TCONS_00023373 TCONS_00252810 TCONS_00207069 TCONS_00175546 TCONS_00209711 TCONS_00116172 TCONS_00252107 TCONS_00148280 TCONS_00249011 TCONS_00176735 TCONS_00031939 TCONS_00169199 TCONS_00131137 TCONS_00039951 TCONS_00155779 TCONS_00063181 TCONS_00009259 TCONS_00111497 TCONS_00020017 TCONS_00209636 TCONS_00019961 TCONS_00233372 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00085967 TCONS_00039904 TCONS_00199802 TCONS_00207755 TCONS_00250246 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00200529 TCONS_00115148 TCONS_00250726 TCONS_00142649 TCONS_00122313 TCONS_00020023 TCONS_00218552 TCONS_00007359 TCONS_00166449 TCONS_00031910 TCONS_00251929 129 XLOC_107421 XLOC_069855 XLOC_125332 XLOC_140827 XLOC_040997 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_107144 XLOC_105634 XLOC_103305 XLOC_105361 XLOC_153873 XLOC_003782 XLOC_012242 XLOC_084087 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_022282 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_037471 XLOC_064932 XLOC_094822 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_039186 XLOC_108098 XLOC_102096 XLOC_005606 XLOC_024650 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_066227 XLOC_038213 XLOC_125882 XLOC_011431 XLOC_152715 XLOC_006022 XLOC_052875 XLOC_012268 XLOC_096068 XLOC_071785 XLOC_121077 XLOC_098720 XLOC_042806 XLOC_036490 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_152512 XLOC_070831 XLOC_153522 XLOC_152030 XLOC_141100 XLOC_042587 XLOC_135423 XLOC_063742 XLOC_080255 XLOC_120690 XLOC_074034 XLOC_074241 XLOC_095496 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_155294 XLOC_137409 XLOC_003238 XLOC_119588 XLOC_139451 XLOC_070269 XLOC_153663 XLOC_022206 XLOC_136073 XLOC_149548 XLOC_014040 XLOC_155751 XLOC_125588 XLOC_105327 XLOC_128222 XLOC_070341 XLOC_155048 XLOC_090162 XLOC_151954 XLOC_106509 XLOC_018184 XLOC_079842 XLOC_023768 XLOC_037908 XLOC_004815 XLOC_067397 XLOC_010695 XLOC_128147 XLOC_010639 XLOC_142854 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_052005 XLOC_023721 XLOC_121454 XLOC_126270 XLOC_153189 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_122181 XLOC_069449 XLOC_153669 XLOC_087074 XLOC_073868 XLOC_010701 XLOC_131872 XLOC_002920 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00209032 XLOC_127543 NonCoding NonCoding - 6:64152219-64153072 - TSS156539 853 5 TCONS_00209032_3 52 0.998827667057444 1 0 0.000107999636877353 1.19149476583088e-05 2.77977361639031e-05 7.42310905705153e-05 7.42958473863742e-05 8.29962906229326e-06 8.28814847992459e-06 2.14954933166912e-05 3.66837127035834e-05 3.34088975402152e-05 9.6624329663661e-06 5.30274005361289e-05 1.35671438855644e-05 9.77799863791822e-05 5.64380255512048e-05 0.000967589294690976 0.000241963569057791 0.00217517217184346 2.34687726319461e-05 2.10768795184397e-06 7.7643663881918e-06 0.00243679562207728 0.000415699164541666 0.000345529510950997 1.33440787334988e-05 7.22718768678785e-06 1.20285354067589e-05 0.000120696340149773 7.33536840209947e-05 0.000127428579407952 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-29 134 83.87 0.144196951934349 0 noncoding 1 1 1 1 -0.0633622171091176 0.579861142912628 -0.0149585236604085 0.812391044970016 CGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTTGGTGAGCGCCAATGCTGCGACTTACCGCCTCGCTGCCACTCGGTTTTCTGGTTGTAACACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCCGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGCGATTGCCCCCTTCCGGCTCTGGCTGCCTGTCACCGGAGGGGGAAGGTCTGCAGCCGGCTATCTCTGTTCAGTCCTTTGTTCCGTGCGCGGGCCTGACGGTTTTAGGTTAGGACTGGCTTTTCGCGTGGTAGATATCCCACAGTCTGGTTTGCTAACCCAAATTATTTCGCTCAGATAGCGCTCAGGGTATTCAGGTCAGATTCTTACTCTCAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCTGCTTGCTAATGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGAAATCTGCGAGTTTTAATTGTTTATTTATTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTCGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGATTCCCTTCCCGGGACGGAGCTCCGTCCCTCCCTCTTTTGTCTCT TCONS_00205327 . 3' 333887 TCONS_00205327 . 3' 334739 EMBV3_03584 CAGTTATCTGCACTCACTTCTGGAAATTGGGGAGCTGCTGAAAAAAAGACTTGAGACCAC Gene GeneID:613372|NAA25:XM_002694592:680_cdna Constitutive 0 NULL GeneID:613372 17 GENE NAA25 NULL N(alpha)-acetyltransferase 25, NatB auxiliary subunit EMBV3_26690 CCGGAGGGCGGGAGGAACATGACATCGCGGAGATGGTTTCACCCAAATATCACTGGCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14721 TTTGGGGGACATCTTGGGGCATGATTTCAGTCATTTTTCCCCTTGTGTAAGTTACTCTGG Gene GeneID:513520|ATP6AP2:NM_001098022:28_cdna Constitutive 0 NULL GeneID:513520 X GENE ATP6AP2 NULL ATPase, H+ transporting, lysosomal accessory protein 2 EMBV3_11469 CTGAAATCCCATGGCTCTGAAGGACGGCACAAAGCCCTCTCTACATGTGGTGCTCACTTT Gene GeneID:524702|LOC524702:XM_002695532:15_cdna Constitutive 0 NULL GeneID:524702 19 GENE LOC524702 NULL similar to olfactory receptor 1231 EMBV3_43056 AGGGAGATACTTACATAGCTGGGTTTCCGGATCCTGTATCTGAATCCCGAGTGCAGTGTG Gene GeneID:511483|F13B:NM_001038529:57_cdna Constitutive 0 NULL GeneID:511483 16 GENE F13B MGC134145 coagulation factor XIII, B polypeptide EMBV3_11748 TGGAAATCATACCTGCCTTTCCACAGTAGTGAAGATCCAGTGCAGTCTTACCCAGAGGAC Gene BVT0102_173107 + 0 NULL GK000008.2:80836092-80843247 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37571 CCACGAAGAGCTGTTAGATCAACAGGTGTATAAACAGCCTGCCTTCAAAGCAATGGAAAG Gene BVT0102_056518 - 0 NULL GK000006.2:103825581-103844032 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206079 TCONS_00206082 TCONS_00206081 TCONS_00206083 TCONS_00206078 TCONS_00206080 1 XLOC_124815 Coding TCONS_00206082 XLOC_124815 Coding Coding KLHL8 6:103836652-103897422 j TSS153740 10084 1 TCONS_00206082_3 590 0.306822689408965 11 0.834241142687884 1.2394633457313e-08 0.000388678121286285 0.000263110069972104 0.000304589127952227 0.000237365583739515 8.33656590370002e-05 0.000338307981674754 5.081673423038e-05 0.000551076811112573 3.92082578228737e-05 5.0352233609459e-11 4.59784263087264e-14 1.09104930534029e-09 2.5444599127809e-08 3.97519319391974e-05 1.76432973230297e-11 4.00915752008289e-07 1.44441538461895e-10 1.13248115404693e-06 0.000140308510095496 0.000182901046526674 0.000314149063409868 0.000208849623407834 4.6260729837505e-21 0.000689067483318074 0.000565985101129801 0.000310520158049608 0.000107420712146818 3.0187569602513e-10 3.08836946091029e-11 XM_002688407.3 KLHL8 PREDICTED: Bos taurus kelch-like family member 8 (KLHL8), mRNA. 0.0 6033 100.00 0.331614438714796 XM_005263151.1 KLHL8 PREDICTED: Homo sapiens kelch-like family member 8 (KLHL8), 0.0 3157 79.45 0.35531535105117 TCONS_00206082_3 sp|Q9P2G9|KLHL8_HUMAN KLHL8_HUMAN Kelch-like protein 8; 0.0 1179 91.61 0.998305084745763 8 coding 0 0 0 0 -0.423636757968638 0.0427034389440604 -0.27246394074312 0.0273763884093987 GCGTTCGTCGGGTGCTCGCGCGGGGCCGGTGCTGCGCCGTCCGGGGCTGCAGGAACCTGGCAGCGCGGCTGCATCCTTGGCGAGGCCCGGGACGGGGGCGGGGGTGGGGAACCGAGCGGAGGGAACCAGCCGAGGACTGAGCAAACTGGACAGTGGCATTTGAGTAGTTTTTGAAAAATGTGTGAAGTTTAGTGGACTGTATCTACCTTCTGCCTTCTCCCCATCCGTTACAAAAGAATAAATGGGATGTTTCAGAAGAGAGCTATATTAAAAGAAAAGTGTTGCAAATGGCTTCAGAAGCTGTGAATGCAAAACAGGCTAGGAATCGCTTCACAAAGGGGAAAAGACAACAGCAAATAAAGAACAGATCTTCACTTGGTGATGGTGATGGAGAAGACTCCTTTCTCTTTGAAGCAAATGAAGCTTGGAAAGATTTTCATGGTTCTCTTCTTCAGTTTTATGAAAATGGAGAACTCTGTGATGTCACACTGAAGGTTGGCTCAAAGCTAATCTCCTGTCACAAACTTGCATTGGCTTGTGTTATTCCTTACTTCAAAGCCATGTTTCTCTCTGAAATGGCTGAAGCCAAGCAAACACTGATTGAAATAAGAGATTTTGATGGTGATGCAATAGAAGACTTGGTTGAACTGGTGGCTAGAGCTTGTTGTGAATACATGAAGTTACATTTTCATCCGTCCAACTGTCTGGCGGTAAGAGCCTTTGCAGAAAGTCACAATCGAGTAGACCTAATGGACATGGCGGATCAGTATGCCTGTGAGCATTTTACTGAAGTGGTGGAGTGTGAAGACTTCGTAAGTGTGTCACCTCAGCATCTCCATAAGCTTTTGTCCTCCAGTGACCTAAACATTGAGAATGAAAAGCAGGTCTATAGTGCTGCCATCAAGTGGCTTCTTGCCAATCCTCAACATCATCCCTTATGGTTGGATGAAACACTTGCACAGGTTCGTTTGCCGCTGTTGCCAGTTGACTTTCTCATGGGTGTTGTGGCAAAAGAACAGATTGTCAAACAAAATCTAAAATGTAGAGATTTATTAGATGAAGCAAGAAATTACCACCTTCACTTGAGTAGCAGAGCAGTACCTGACTTCGAATACTCTATTCGGACTACCCCAAGGAAACATACTGCTGGAGTGCTGTTTTGTGTAGGTGGTCGAGGTGGATCAGGTGACCCCTTCCGCAGTATTGAATGCTATTCTATCAACAAAAACAGTTGGTTCTTTGGACCAGAAATGAACAGTCGAAGGCGACATGTGGGTGTAATCTCAGTGGAAGGTAAAGTGTATGCAGTGGGTGGACATGATGGCAATGAACATTTAGGTAGCATGGAGATGTTTGATCCTCTCACTAATAAATGGATGATGAAGGCATCGATGAACACAAAGAGGCGAGGAATTGCCTTGGCTTCCTTGGGAGGCCCAATTTATGCCATTGGAGGGTTAGATGACAACACTTGCTTCAATGATGTGGAGAGATACGACATAGAATCTGATCAGTGGAGTACAGTGGCACCAATGAATACTCCCCGTGGAGGTGTTGGCTCCGTGGCTCTCGTGAACCATGTTTATGCAGTAGGTGGCAATGATGGAGTAGCTTCTCTGTCTAGTGTGGAGAGGTATGATCCACATCTCGATAAGTGGATAGAAGTTAAAGAGATGGGTCAGCGAAGAGCAGGCAATGGAGTTAGCGAGCTCCATGGTTGCTTATATGTTGTTGGTGGTTTTGATGATAATTCTCCTCTGAGTTCTGTTGAGCGGTATGACCCTCGAAGCAACAAATGGGATTACGTAGCAGCCCTTACCACTCCCAGGGGTGGAGTGGGGATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGGTGGTCATAATGGCAATGCATATCTAAATACAGTGGAAGCATTTGATCCAGTGCTGAATAGGTGGGAGCTTGTTGGATCTGTGTCTCACTGCAGAGCTGGAGCAGGTGTAGCTGTGTGTGCCTGTTTAACTAGCCAAATCCGAGATGTAGGTCATGGATCCAGCAATGTGGTTGACTGTATGTGACTTGAGTTCCAGTCACCAACAGTTTAGTCATATCCGATAGGCAGAAAGACAAGCAGGATTTTGTAGTGGCCACCTTTGAGCAGTGTTAACTGTTTACTAGAGTGTCATGTAAATGTAAACTGTTCTATGTGACTGAGTGCAACTTTTGGAATGGTAGCTGAAGAATTACTAGTAATAAAGTTGGTATCTCCCACTTTAACAAATAATGAAGTAGGGAAAGAAGACAGTCTAAGCTGAAACCTCCTCCTCCAAAAAGAAAAAAAAGTGTTTAGTGGAGTGGAGTGCCAGAATTTTGAAATTAACTCTTTTTTTTAAAGTGTGGGTGAATGAACATGCAGAAGGAAGTCGCTTGCTGAGCTTTACCTTTTGCCTAAAGGCGTTAACCTTAGGCATTGGACTTTTCCTCTGGGGAGATTAGAACCTGTTCATCAACACAGAGGTATCAGGACTCCTAACAGACCTGCTGCATTTGAAGATCATTTCTCCTTGGTGCTGATGAATTTATGCCTTGCTTTTTTCTAGGTGTTGATTTGTCAATTCCTTGGATATTTACAGAAGTAGGAAAAATGTTTCATCTTTCTGAGTGTCAGCCTATAGGATCATAGGCTTCATTTCAGTTTGAATTGTTAGGACACCAAAAGATCTAAATGAATGATTCCATCTGAATGAACCTACACTTATTTTTTCACGTGAAAGGGGTTTTGTTTCATAGTAATAAAAAATGGAACCAGATGAGATTATTAGAGGAGAAGCCTTTAGAGTCAGCATTATTCTAGTGCCCATTTGAGAGACCTTGAATGGGAGTGGTGTCCATTACATGACTCCCTAATGAGGCAACTCCAAAAATATGTTTAACACTACTTGATTTAATTATTTCATTCTGAATCTGAGGTTTATTATCCTTCTATTTTGCTGTTTGCCACCATCATAGTTTTTCTAACTGTACAGAATCTGGATTTATTTATTATGGGAAATTTGAATTCATTTCTACAAAAACCCTTTACAGACTTTAGTTGAACTGTTGATTAGTTCATATCCATCTTTACCAATAAAAGATATTGTAAAAGCAAAGGAAGATGAAACTAGTTTTTTTTCTCCTGTTATATTTCTCTCCAGTGTACTTAATGAATTTTAATTGAAAATATTTCTTTCCATTGCTTTGAAGGCAGGCTGTTTATACACCTGTTGATCTAACAGCTCTTCGTGGTTTTACCAGCATTATAAAGTGGCTTATTCATTATATGTATATATTTTTATAAATATTTATGAAGAATATTAAATTATTCTATTTTGTATTTGCAGTGCAGTTTGGTATTCTAGACGTTCTTGAATTCTCCTTTAGTTATTATGCCTTAGGATTCGGTGTAGTTCACTGCTGTCAGTCATCTTGTTCACGAAGCTGGGGCAGTGCAGAACCTGACGTTAACTGCCTAGTAGCTGGGATGGGCCTTGTTAAATGACAGCCTAGGCTTTTTCAGTACAGAGAGGCAAAAAGCCACGTTATAAAAGCTAGTGCTTTGTGTATATTCAATCAAAAAAATAAGGTGAAGAAAATTTAAGAGAACTCAGCAGAAAAAGGTCTTTCATGAAGCCAACTCAAATGTTCCCAAATTATGGCAATTTTTGCTGTCAGCCTGTGGGCAAGTCCATAAGTCATTGCTGGATCTGAATTGATGTTCTCTTGTACAACTGTAACCGTATTTCAGTCAAACCCCAACGCAGTTCACTCTGTAGCACTTACTGGACTGGCTATAACTGGCTGCATATGGAGAATAAGGCTCAAAACCTGGCTTCAGCTCCTTCCCAGGTCTAATGGACTTCCTGTATTATAATACTTGTCTAGGTATGGTTGCCTAATGTTATATTTATTTTGAGGGGGAGTGGATCTTTTATTCTTTCTAAGGTTATTAAAAAATTTTTTTTAATTTCTGCCTTTGTCATGAGTATAGCACTTGGGAGCATGAAGGTGTTATGTTTTCATCACTAGTTTTATCAATACAGGAGTCATCTAACATTACTAATTTGCTACTCTCGCTACCATAAAATATGAACTACTGCTAAGGGAAATAATGTGAAGTAAACAGCACATGGCTACCTGTTACATTATGTGCGGGCCATCAGAAGTATAGCCTTGAAGGACCTGACAATGGTATGAAAAGATTAAAGTGTTTTATGTAGAGTGACAAGTAGCAAAAGAACTTCTCTATAATATTTTCTCAAAACCATATATAAATTTGTGTAGTAATATTCCAGCAAATCAAAATAGTGAAACTCTCATATATTACCAAGTACAGAGATCAGAAAGTTGGATTCACATCAGTGCTATTTATTGATTCAAAATATATTGCGTGTATCTATTATGAATAGGAATATGAGTATTATGTATCTATTATTCTTTCTGTATAATGTATGTAACTTTTCTTTGATTGCTTTCATAGAATCTTTTCAGAATGATATAATTGTTTATTCTCCATCCTTCAAATACAAAATTGATTTAGTAGGTTGGCTGAAATATTTTTTTCTCCAAAGAAAGGATCTTTATGTTTAACAGAAAATACGAAGATTTTTGTTAACCCTTAAAGAGGTTAAAGGCAACTGACTGAGCAATTTTCTCTTCAGCAGTTGTAGACTTATACTATTTAGAAATAAGATTCTTTATGCATTAAGATGTTGTCCTTCCAGTTAGTAACCTCGTGAATCTTTGTTTTCTGCCTGTCTTGCCATTGCTAAAAACTCTTCTGAAACTCTTCCTTGGAAACCACCTGAAGATCCATTTGTAAGTCATCCAAGAGAATTAGTCTCATCACAGTCATACAAGAACAAACATGTGGTTGCCAGAGAAGGTGGATGGGGAAAGGAGAGAAATAGGTGGGGAGATGAAGAAGTATAAATGTGTCATGGGTATGAAAACAGTAGGATAGTTTCTTTGAAGGGAACTCTGGGAATTCTATTGTGGTATAGAAATTCTGGTGGTTTTTGTTGTTTTAACAAGTCATTTTTCCATTATTTTATTGGTTGAGGCTAAATTCAGCCTACTTGAACTATATAAGGGATTTCTTAAATTTGGGTAGTAATCATGGGGCGTACTGTTAACTGCAATTTGTTTATTAGTAACTATAGTTTGTTTAATGGAATGCCTGCATCAGTCACTTTATAATAACATTTTAATCTTTACAGTAATTTTGCAATTGAGAGTTACTCAGATACAGGAAGAAACTTGTCCAAGATTTACAACTAGTCATTGGTTAACCAATATTTCTCTGACTGAAAAATTCTACTGTTCCACCTAAAGTATGTATATTTAAGGAAGGATTTTCTTTTTCATAGCTGCTGCTTAGCAGTATAAAAGTATTTCTGGTCACTACTCATTTTTCGGTCACTTATTTCCATTTATTATATTGGTTTAGGTTTTATGTGTACAATATAATGATTCAGTATGTGTATACATTGTGAAATGGTCACCACAAGAATCCATCATCATAGTTTTTTTCCTTGAAATGAGAAGTTTTAAGATCTGTTCTCTCAGCTCCTTTCAGATACGCCACACAGTACTATTAACTACAGTCACCACGCCATGCGTTACGTCCCCGGGCTTATTTTTTTCTATCTGGAATTTGTATTCGTACCTTTTGACCCCCTTTACCTATTTCTCCCACCCCCTACACTGCCTCTGGTAACAACCGACTGTATTCTGTATTTAATGTTTCATACGTAAGTGGAACATATGTGTGACATGTGCGTTTTTGAGCACAGTAATGAAACGCCTGTGCATTCAGTCCGTAATTATTAACAACATTCCTTTTGTTCCTTCTCAATTCCAATTCCCAGCCAACTGTTCTCGCTAGAGCTAAGTACTATCCTGAGTCATTCGCTTCTTTGCTCTTTTTTTGTTTTCATACAAATAAGGAAGCTACATGTTGTGTACTCTTACGTTGGCGAGCTTTATAAAGAATAGTATCATTATGTAGTCTTAGTAATTTGATCTTTTCATTCAGCAGGTTCGCTTTTCAAATTTGTTGGGTATTTTCCATATTTTTGCTTTACAGTGCTGAAGTGAATATTTGAATACAGTTTCTTGGTATGCATGCGTGTGCAAGTTTTTTTAGAGTACATATCCAGAAGTAGCGTTTGCTTGATCAGCTTTATAAAATAGTGAAATTATTTTCCAAAATGGTTTTGCCAGTTTACACAACCATTTTGGAAAATGATTTATTATTTACTTGCTGTTGTAAGACATGATTCATTTGCCAATCTGTTAAGTGTAAGATGATATTTTATTATGGCTTTAGTTTGCATTTTCTTGATTGTTGAGTTGAACATGTTTCCATGATTATTAGTCGACTGGTTTCTTCTGTGAAATGCTCCTTTTTTCCATTTTTTCCTTGTTTACCTTAGAGTTCTTCATAATAGGATACTAATTTTTCCATTTATTTTTATTGCACATTATCTTCTCTCAGTTTGTGGCTTATCTCTTCACTTTGTATTTTGGTACAGAAAACTTAACTTTAATGTATTTACATGTTCTTTTTTGTGTCTTAAGAAATCTATCATTTATTCTAATAAAGTTTCTCATATGTAGTCTTTAATCCACCTGGAATTGATTTGTGTATGTGTGAGAGAAATTTTATTAATTTTTACTATTGGGTATTTTTTATTATGTGATGACCAGTTTTCTTCATACTGTTTAGTAACATCCTTTCTTTGGGGACTTTTCCTACATGGCCAGTTTCTGTGTAAGTAAATGTGTGGGACTTTCTATTCTACTCCAGTGGTCAGTTTGTCTTAACCAGGAGCTAAGTGACACACAGGGTGAAGTATTCTTTCTCTTCTATTCTCTGAATTATTTAACACTGAAACAATCCATTTATTCAACATGTAATAGAACTTATGTATAAAACCACCTTGACCTCTTTTTTTTTTTGAGGAAAAATTAATTATCAATTCAGTATCTTAGTGGTTATACAACCCGTTAGGATGTGTAAGTCATTTTAAGTAAGATTTACTTTTTAAAATATCATTTGCTGGATCCCACTTGGTTTTACTTGTACTGTTTTCACTAATGTTCACTTCTAAGTATTTTATAAATGTTCATTCCATGTTTTGCTTTGATCTGTGAGTTTAGAAGTATATTTTAAAATTCCAAATAATATTTTTTTCTTAATTTCTTTTGGTTCTGTCATGATTGTTGTGAATTCTTGAAAAGCCTTATGTTGTAGTAATGCAGTTTCTGTATTTGTGTTTTATATCACATTAGCTGATTGTGTTCTCAGTTGTCTGTTTATGGCTGTTTTTTTCTTCTGGTTCTTTGACCTATCACTGGAGGGAAGTATGTTGACATTCCACATTGTGACTAGTTTTCAGCAAGGATGTGTGTGTGTGTGTGTTGAGGTTTTCTGATTTACATCTATGCTAATTTAAAGGAATAGTTTTTTAATTTTTTTTGTTGTTTTCGGCTGTACTGGGTCTTTGCCATGCTCGGGCTTGCTTTAGTTGCCTTGAGCAGGGGCTGCTCTCTAGTTGCTGTGTGCAGGCTTCTCATTCCTGTGACTTCTCTTGTTGCAGAGTGCCGTGCTCAGTGGTTATGGCTCATGGGCTCCAGAGCACAGACAGGCTCAGTAGTTATGGCCCATGAACTTAGTTGCCCCATGACATGTGGGATCTTCCTTGACCAGGGATTGAATCCATGTTCCCTGCCTTGGCAGATGGATTCTTAAACCACTGGACCACCAGAGAAGTCCTGAATTTTGTTTCTAAGTGGTGTATTTTCAGACGTGTATTTGATTCAATCTGTTCTAGGGGCTTTGTCAACCCTTCCCTGAGGGGCTTCCCTGGTAGCTCAGACAGTCAATGTAGGTGACTTGGGTTCAATTCCTAGATCTCAAAGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTTTTGCCTGGAGAACTCCATGGACAGAGGAGCCTGGAGGGCTACAGTCCATGGGGTCGCAAAGAGTCGGACACAACTGAGCAACTAACGCTTAACTTCAGGGGCTTTATCATTGATTTGAACTTTAACTGGTTAGTTTTGAACGTTCACTGGTTAGTTGATGAGGCCCAGAAAACCCAGCCCGTTCAGACCTGCCTCAGATCCTTTGTCCTGTTGCTATCAGAGAAGGCAAAGCACCTTCCACCATCCAGTGCTGCTCTGGGGCTGGACCTCCGAATCTCTCAGTGAGTGCCCTTGGCTCTTGTGGTTCACGTACTGGTTGCTCATACACATACATACCCTCTCAGTCATTATTAACATTGCAGAGGTCTCATACCTGCTTAAATTGTGGGGTTCCTGAAAAACCTATTTTGATTAGGATATTATGCACAGGTTAAAAAATTTTTATCCTACTTGCCCTGGCTGGTTTATGCTTTTGGAAGGGTGAGGATTAAGTGGCCAGAAATTTTACCAGTGCTGGTGGTTTACTTGCTAAGTTGTCTCCGACTCTTACGACCCCTGTGGACAGTAGCCCACCAGGCTCTTCTGTCCAAGGGATTTCCCAGGCAGGAATACTGGAGTGGGTTGCCATTCCCTTCTCCAAAGGATCTTCCTGACATAGGGATTGAACCGAGAGCTTGAACTCTAGTCCCCTGCATTGCAGGTGGATTCTTTTACTGCTGAGCCACCAGGGAAGCCCATATAGTACTACATCCCTCTGTGAAACTTATCTGTTGAGTATCTTAGTAGACCTTAAACTTTTTGGTCCCATATATTTGTCATGCCTAAAGTTCTTTCTCAAATTTAGATGGGGAGTTTTTAATTCATAAACTAAGTTTCCTCGGTATAGCTGTGTCTATTTGTGCTTCTCTGCCCTGAATGTCTCAAGTATGTGATTTTATTATATACACCAGTACCTTCTAACAGCAGTGTGCTAAATCCCTTCAAAATACTGATGTAGATTCAGAAAATATTTGTGTTCTGCCTGAGACTTTGCAACTTCCCTTTGTTTAAAAAAAAAAAAAGTTTCTGCTTTGGCTTTTGGCCAAAAGTAATAAAGTTCCTACCTGACCATAAATTCCCTGATTTCCCCCTATTCGTCTGCAAACAATTATCTTTTTTCCTGTCTGGAGACCAGAGCTCAGGACTGAACGACACAGTGGCTATTTGTACTACATTCTAACACAATCCTCTAGGTTCCTCGTCCTCGCTTCATTTCTTCATTATGTATTTTAATGCAGTACTAAATCAATGTGCTTTCTTAGGGGCCAGATTTATTGAATTGTAATTCATATAAAAAAACTGACGCACTAGGTTTACAATCTGTGGCTTAGTAAATATAGAGTTGTATCGATCAGGGCTTCCCAGGTGGCACGAGTGGTAAAGAACCTGCCTGCCAACGCAGGAGACATGAGAGAGGTGGATTCGATCCCTGGGTCGGGCCTGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCTCCATGGACAGAGGGGCCTGGTGGCCTACAGTCCATGGTGTTGCCAAGAGTTGGACACAACTGAATTGACTGTCACACACGAGCCAACATCACCATAACCCAGATTTAGTTCACTTTCATCATGCTCCCCAAATTTTCACGAGCCCCTCTTGGGGTCAGTCTTCCTCCCTCCCTCTTTTCCTCCCTGCTTCTCACTCAAGGCAACCACTAATGTGGTTTTGGTCCATAAACTTGCCTTTTCTGAGTATATCATGTAAGTGAAATCAAACTCTAAATATAGCATCTTGTACCTGTTTCACTTAGCATAATGTTTTGAGGTTCATTTCATCTGTACTGTAGTCGTTTTAATACTGAACAGTCTGTCTTACATTGTTCAGCCATTTACCAGTTGATCAGTTTCCAGTTTGGGGCCATCACGCAGAATGCTGCCATGAATGTTCATAAACATGTCCATGTGAACATGTTTTCATGTATCTTGGGTGAGTCTACACAAGTGGGATTGCTGGTTTTTATGGTTATCCACAGGGGCTGTACTATATTATATTCCCATCAGTACAGTAGGAGGTTTCTGCTTTCTCATCACCCT EMBV3_36943 TGGAGTTAGTGTGTGATCCAGCAATTACACTTCGGGATATACACCAGAAGAATTGAAAGC Gene BVV0102_336782 + 0 NULL GK000002.2:62007834-62023939 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07681 TCCCTTTGACTAAGGTGTATGTTGTTGAAGAATAAGAAACAAGGATGTAAAAACGAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34267 GCTCTCTTTGCACTTTCAGGGAAGGAGGACCCACGCTGAGGAAGCAAAAACTGCACAAAA Gene GeneID:511984|SFMBT1:XM_002697015:424_cdna Constitutive 0 NULL GeneID:511984 22 GENE SFMBT1 NULL Scm-like with four mbt domains 1 EMBV3_30558 GGGCAAAAAGAGTTCCAAGTTGTGGTCCCTGACCATGGAAGCTATAGTCGGGTTGGTGCT Gene GeneID:617785|PILRA:XM_002698137:516_cdna Constitutive 0 NULL GeneID:617785 25 GENE PILRA NULL paired immunoglobin-like type 2 receptor alpha EMBV3_28550 ACCTGGAATGTGCATCCTTCATTTGAGTTCTCTTTCATCAGTTTGGGGGGAGGGTTGGGG Gene GeneID:511031|C10H14ORF169:NM_001099702:85_cdna Constitutive 0 NULL GeneID:511031 10 GENE C10H14ORF169 NULL chromosome 14 open reading frame 169 ortholog EMBV3_04603 CCCCTTGTTCTAAAGCTCCCCAGGAGAGGGTCTTGAAGGAGAGAAACACTGAGAGCTGCT Gene GeneID:513593|SERINC2:NM_001035285:106_cdna Constitutive 0 NULL GeneID:513593 2 GENE SERINC2 TDE2L serine incorporator 2 EMBV3_37593 CAGAGATCCTGCACGAATCCCACACAGTGAAGCTAGGGCCAGAAGAAGAGAAAAAGATCC Gene GeneID:536356|TGM6:XM_002692236:1492_cdna Constitutive 0 NULL GeneID:536356 13 GENE TGM6 NULL transglutaminase 6 EMBV3_20089 CGTTTTGGGAGGCGTTTGAAGCGGAGAATCAGAGCGAGTTGGGGGCCGATTTTACAGATT Gene GeneID:100335340|LOC100335340:XM_002689553:40_cdna Constitutive 0 NULL GeneID:100335340 8 GENE LOC100335340 NULL hypothetical protein LOC100335340 EMBV3_41486 AATTTCTCAGCTCTTCCCCAGTAGCACATTGGACACCTACCAACCTGGGGGGCTCATCTT Gene BVV0102_353202 + 0 NULL GK000016.2:53538876-53641325 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25449 GATTTCATCCTCCAGATCTCCAACGAGAGCCCTCAGGAAATAGCCAAGAAAGTGGAAGGC Gene GeneID:508954|SORD:NM_001037320:53_cdna Constitutive 1 NULL GeneID:508954 10 GENE SORD NULL sorbitol dehydrogenase EMBV3_24606 AGCGAGAAGGAGCCTACTCAGAAGAAAAAGATTCCAGAAGATGAGTCAAGTGTGCCGACC Variant GeneID:534137|SASH3:NM_001077998:11_cdna 195^290 1 EMBV3_39788 GeneID:534137 X GENE SASH3 HXCXORF9 MGC142365 SAM and SH3 domain containing 3 EMBV3_40484 TGGGAGATTAAGATAATGTAATCAGATTTAAACCTACCAGTTTGCCCTACCCCTTAAGCG Gene GeneID:532835|AZIN1:NM_001082611:26_cdna Constitutive 2 NULL GeneID:532835 14 GENE AZIN1 MGC143073 antizyme inhibitor 1 EMBV3_16553 GTCTCTTGTTTTGGGCTGTGAGGTAGAGAGGAGGCACGCATGACTGTGTCTGGTGTTTTT Gene BVT0102_051262 - 1 EMBV3_26698 GK000019.2:18582030-18604658 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09665 AAAGGGTGATGGGAACATCCGGTACTACGAGATCAGCACGGAGAAACCCTACCTGAGTTA Gene GeneID:615274|LOC615274:XM_002690526:547_cdna Constitutive 0 NULL GeneID:615274 10 GENE LOC615274 NULL similar to coronin, actin binding protein, 2B EMBV3_25285 CCTGTTTGCACTTGGCTTTTACCTGCTGCTCAGACATCTTGACATTGACCTGCTGTGGTC Gene GeneID:505012|G6PC2:XM_002685309:144_cdna Constitutive 0 NULL GeneID:505012 2 GENE G6PC2 NULL glucose-6-phosphatase, catalytic, 2 EMBV3_23782 TTCCCTGTTCCAATTCCGAATGCTGTTTGTTCCCCCGAGGTATTTGCATCCAGCCTGGCT Gene GeneID:540783|SEPT6:NM_001035430:26_cdna Constitutive 0 NULL GeneID:540783 X GENE SEPT6 MGC127107 SEPT11 septin 6 EMBV3_30576 TCATTGCATTCACATCAGACATGATCCCCCGCCTGGTGTATTACTGGTCCTTCTCCATCC Gene GeneID:521784|ANO6:XM_002687355:52_cdna Constitutive 0 NULL GeneID:521784 5 GENE ANO6 TMEM16F anoctamin 6 EMBV3_28018 GATCTTAGTTCCCCAAACAGACTGAACCCACGCCCTCAGCAGTGAAAGCTCAGAGTCCTA Gene BVT0102_058549 + 0 NULL GK000004.2:115635150-115796820 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26984 GAACTCACGGCAGCCAAGAAGAGTTCCAATGTGGTGTGCTCCAAAGGTGAAAGGACGAAA Gene GeneID:100336702|LOC100336702:XM_002689726:73_cdna Constitutive 0 NULL GeneID:100336702 8 GENE LOC100336702 NULL hypothetical protein LOC100336702 EMBV3_02338 GGTCGATGTGAAAGTGGACCCTAAGGACTTGCGAATAGATACATTTCGAGCCAAAGGCGC Gene GeneID:504754|MTRF1:NM_001035013:35_cdna Constitutive 0 NULL GeneID:504754 12 GENE MTRF1 MGC128774 mitochondrial translational release factor 1 EMBV3_40776 CCCTTCCATTACTTTAAATATATTCTGCCACTCCCTTCTGGCCTGTAGAGTTTCTGCTGA Gene BVT0102_264189 + 1 EMBV3_09455 GK000030.2:101170125-101217310 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251406 1 XLOC_154347 NonCoding TCONS_00251406 XLOC_154347 NonCoding NonCoding - X:62780120-62781900 - TSS188627 1780 2 TCONS_00251406_3 158 0.987640449438202 1 0 3.95830784729298e-06 2.31856892500819e-06 0 0 0 0 0 0 4.92517995842686e-06 4.6230279538737e-06 3.9750899497554e-06 7.40065881222372e-05 0 0 2.75629130478535e-07 0 0 0.000296016227993526 0 8.08026687603529e-07 1.70546963300432e-06 4.16891911778565e-06 5.92704927619562e-05 4.70918023230977e-05 0 9.89532786667766e-07 4.11457098987775e-07 1.07923391179921e-05 0.000114546761729127 0.000104707621798162 XM_003586954.2 PPFIBP2 PREDICTED: Bos taurus PTPRF interacting protein, binding protein 2 (liprin beta 2) (PPFIBP2), mRNA. 1e-90 338 74.35 0.300561797752809 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 4e-28 131 68.17 0.223033707865169 0 noncoding ATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCTCGATAAAGGACAGAGATGGTATGGCCCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAATAATACACAGAAGAACTGTACAAAAAAGATCTTCATGACCCAGATAATCACGATGGTGTGATCACTCACCTAGAGCCAGACATCCTGAAATGTGAAGTCAAGTGGGCCTTAGAAAGCATCACTACAAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGGACACGACTGAGCGACTGAACGGAACTGAGATGAACTGAGGTCTGAAGTGGGTTTCTTGTAGACAGCATATATATGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTGTCTTTTGGTTGGAGCATTTAATCCATTTACATTTAAAGTGATTATTGATATATATGTTCCTATTGCCATTTTCTTAATTGTTTGGGGTTGATTTTGTAGATCATTTTTCTTGTCTTGTATTTCTTAACTATGTAAGTCCCTTTAACATTTGTTGTAAAGCTAGTTTGGTGGTACTGAATTCTCTTAACTTTTGCTTGTCTGAAAAGCTTATTTCTCCATCAATTTTGAATGAGATCCTTGCTGGGTACAGTAATCTTGGTTGTAGATTTTTCCCTTTCATTATTTTAAATATATCCTGCCATTCCCTTCTGGCCTGTAGAGTTTGTGCTGAAAGATTAGCTATTAAGTGTATGGGGTTTCCCTTGTTTGTTACTTGTCGCTTCTCCCTTGCTGCTTTTAATATTCTTTCTTTGTGTTTAGTCTTTGTTAGTTTGATTAGTATGTGTCTTGGTGTGTTTCCCCTTGGGTTTGTCCTGTATGGGACTCTTTGTGCCTCTTGGACTTATTTCCTTTTCCATATTGGGGAAATTTTCAACTGTAATCTCTTCAAAAATTTTCTCATGCCCTTTCTTTTTCTCTTCTTCTTCGGAGACCTCTATAATTGGAATGTTGGTGAGTTTGATATTGTCCCAGAGGTCTCTGAGACTGTCCTCAGTTCTTTTCCTTCTTTTTACTTTATTCTGCTCTTCAGAAGTTATTTCCACTATTTTATCTTCCAACTCACTGATTCGTTCTTCTGCTTCAGATATTCTGCTATTGATTCCTTCTAGAGTATTTTTATTTTCAGTAATTGTGTTGTTTGTCTCTGTATGTTTATTCTTTAATTCTTTTAGGTCTTTGTTAATTGATTCTTGCATTTTTTCCATTTTGTTTTCAAGGTTTTTGATCATCTTTACTACCATTTTTCTGAATTATTTTTCAGGTAGTTTGCCTATTTCCTCTTCATTTATTTAGACTTCTGTGTTTCTAGTTTGTTCCTTCATTTGTGTAGTATTTCTCTGCCTATTCTTTTTTTTTTTTTTAACTTATTGTGTTTAAGTTCTCCTTTTCCCAGGCTTCAAGGTTGAATTCTTTCTTCCTTTTCGTTTCTGCCCTCCTCAGGTTGGTCTAGTGTTTTGTGTGAGCTTCGCATAGAGTAAGATTTGTGCTGAGTTTGTTTGTTTGCTTGTTCGTTTTTCCTCTGATGGGCAAGGCTGAATGAGGTGGTAATCCTATCTTTTGATGACTTGGTGTGCATTTTTGTTTTGTTTGTTGTTTAGATGAGGCGTCTTGCCCAGGGTGCTACTGGCAGTTGGGTAATGCTGGGTCTGGTATTCAAGTGGTCTCCTTTGTGTGAGTTCTCACTATTTGATATTCCCTAGGGAAGGCAATGGCACCC TCONS_00244585 . 3' 30152 TCONS_00244585 . 3' 31931 EMBV3_00371 ACCAGAGCGTGAGTGAGGACTGGAAGTATGTTGCCATGGTGATTGACCGCCTGTTCCTTT Gene GeneID:517519|CHRNB2:XM_002685992:338_cdna Constitutive 0 NULL GeneID:517519 3 GENE CHRNB2 NULL cholinergic receptor, nicotinic, beta 2 (neuronal) EMBV3_36916 TGAGGTGTTTGGGCTTCTTATTTGAGTGGCTTCTCTTTCGAAGCACAGGCTCTAGGTGGG Gene BVT0102_280264 + 0 NULL GK000011.2:49715653-49760818 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11754 CTCTACGAAAACAATACAACAGAGAGCCAAAAGAGTCAAGAGAGCTTCAACTGCTGGTCC Gene GeneID:100335385|LOC100335385:XM_002691201:148_cdna Constitutive 0 NULL GeneID:100335385 11 GENE LOC100335385 NULL BCL2-like 1-like EMBV3_34592 GCATGGTTGCAAAAGAAGAGAGAGCAGGTCCTAGAAATGAGGAGAATTCAGCGAGCAAAG Gene GeneID:540268|LOC540268:XM_002694011:133_cdna Constitutive 0 NULL GeneID:540268 16 GENE LOC540268 NULL hypothetical LOC540268 EMBV3_32841 TTCGTGCCCCTCCACAGCTTCTTCCTGACCCCAGACAGCTTTGAACAGAAGGTCTTGAAT Gene GeneID:100337222|LOC100337222:XM_002693099:477_cdna Constitutive 0 NULL GeneID:100337222 15 GENE LOC100337222 NULL parvin, alpha-like EMBV3_00872 GTCAAATTGATCATCTAAGTTAAACTGCCCTGACTGGACTTACAGCTGTTCCCTCAAACC Gene BVV0102_032065 - 0 NULL GK000011.2:49761101-49779643 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027908 TCONS_00027906 TCONS_00027909 TCONS_00027907 1 XLOC_015367 Coding TCONS_00027906 XLOC_015367 Coding Coding KCMF1 11:49777210-49811663 j TSS19687 3528 1 TCONS_00027906_2 264 7 0.89779983745501 0.00489898581462719 0.00374799065302802 0.00431449404064942 0.00483022177325419 0.00413477137461305 0.00176768346713574 0.00397148142075134 0.00398756977469054 0.00610072632466563 0.000788449412717763 0.000649913350578322 0.000197446200043527 0.00133272473131415 0.00376321783529526 0.00181523392377157 0.00828519705372003 3.99013520224032e-05 0.000443984745177904 0.00474662043961326 0.00709629528538631 0.00547551099060781 0.00213592481425246 0.00207708175456406 0.00382130977546944 0.00799955715963267 0.00648130314667615 0.00415972304650065 0.000396669852395054 0.000718560973494361 0.000715167937903605 NM_001076275.1 KCMF1 Bos taurus potassium channel modulatory factor 1 (KCMF1), mRNA. 0.0 1654 100.00 0.259637188208617 NM_020122.4 KCMF1 Homo sapiens potassium channel modulatory factor 1 (KCMF1), mRNA. 0.0 2783 85.62 0.685657596371882 TCONS_00027906_2 sp|Q1LZE1|KCMF1_BOVIN KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1; 0.0 529 99.62 0.981060606060606 1 coding 0 0 0 0 -2.58236873180736 0.0312348148306021 -0.133466927559252 0.20617244020927 ATAGGTGTCAGCTGTGATGCATGTTTAAAAGGAAATTTTCGAGGTCGCAGATACAAGTGTTTAATTTGCTACGATTACGATCTTTGTGCATCTTGTTATGAGAGTGGTGCAACAACAACAAGGCATACAACTGACCACCCAATGCAGTGCATATTAACAAGGGTAGATTTTGATTTATACTATGGTGGGGAAGCTTTCTCCGTAGAGCAGCCACAGTCTTTTACTTGTCCCTATTGTGGAAAAATGGGCTATACGGAGACATCTCTTCAAGAACATGTTACTTCTGAACACGCAGAAACATCAACAGAAGTGATTTGTCCAATATGTGCAGCGTTACCTGGAGGCGATCCTAATCATGTCACGGATGACTTTGCAGCTCATCTTACACTTGAACACAGAGCCCCTAGAGATTTAGATGAGTCGAGCGGTGTCCGACATGTACGTAGAATGTTTCACCCTGGCCGGGGGTTAGGAGGTCCTCGTGCGCGCAGATCAAACATGCACTTTACTAGCAGTTCTACTGGTGGACTTTCTTCTTCTCAGAGTTCATATTCTCCAAGCAATAGGGAAGCCATGGATCCTATAGCTGAGCTTTTATCTCAGTTATCGGGAGTGAGACGTTCTGCAGGAGGACAGCTGAACTCCTCTGGCCCTTCCGCTTCTCAGTTGCAACAATTGCAGATGCAGCTGCAGCTCGAACGGCAGCATGCCCAGGCGGCACGGCAACAACTGGAGACCGCACGCAACGCAACCCGGCGCACTAACACAAGCAGTGTTACCACTACAATCACGCAATCCACAGCAACAACCAACACAGCTAACACAGAAAGCAGTCAGCAAACGATCCAGAACTCCCAGTTTCTTTTAACAAGGTTGAATGATCCTAAAATGTCTGAAACAGAGCGCCAGTCCATGGAAACAGGTAAATGTAGGTAGCAGTGCAGGGGTGATCTCTGCTTCCTGCACCCTGACATGCAGAAGGCTCTCGTAATACTCCACATTCAAACTGAAGAGGAAAATGGAAATCTCTAATGAAGCTGCTGTGTGTATTTATGAATATTAATGAATAAAAACTGCTTGGATGGTTTACCTTAACTACTGCATGAGGTTTTTTGCAGCGTGCATGAGTTTTAGTGACCTTGTTATTTAAGAAATTTAAATACAAGGAGTAAAACTTAAAACAAACATAAAAGCCCAAAGCTTTCCCAAACATTATTCAATGGTTACGAGGCAAAAAGAGTTCCTTGACAAAGTAGCTTTTGAATAATGTCTGCCTGAATCACCTTTCTTTGTGTGCCTCCTACGCACAAGCCAGCTCTGCAGTGGACCTGGGGTCGTAGCCGGTGTCGCTCCGCCCTGTGTGGCTGTCCCGTCGCCCTGTCAGTCATCTTCCGTGTGGAGCTCAGCCTGTCTAACTCATCCATAGAAGATACACCAGTACAGCTGCTGTGGGAATCTGCTGCAGGCGTCTGTGTGTCCTGAAAACAAGTCTTGTTCTCTTTGTTGAAAAAGTTCTTTTTGTGGTTGTTGAAAATTTTTTTCAATTGTTAAATATGTTCTATTCAGGTGTAGATGAATTTCATTTATTCACTGTTCAACAAAGTTAACCTGGATTATGTTGTCTTTGTTTTTGAAAATCTCACCTTCTCAATCATATGTTGCGTTATTTATGTATTTGCTTCATAGTTTTGCTGAGACAGATCAGTATCAGGGGATCTTTGAGGATTTGCCTTCCCAGACTTTGTCAATATATTACAACCAAATTCTTAATGCTAACTTGAGCACCTTTTTATTTATTGGGTTTTTTTTCCAAGCCTAAAAAGTAAAGCCTTTTAATTGAATCATGCCACCTATATGCCTATATTGTTAATCCTATGTGTAAAAAAAAAATGTACAGCTTTCTTGGGTTTGTTTTGGGGTTTGAAGGGGCTGGGATATTTTTGATTTTCTGTTCCAGTTTTTGTGCATAGACTTTCACAGTAGCTCCAAGGCAGGGACAGTGGGTTTGGGGGTCGGGGGGCAGTTTTTGGAATGTAAATTTAGGACTTTTAAAAAAGGTGCGCACAGCTTCTGATAAATTTATAACTAGACTTAACCTAATCATGTCTTGTTCCAGTGCTCTCTCTCCTCCAAGCCCTTCCCTCTGTCTCCCCTCTCTCCTCCCATCTGTGTTTCTCTGTTTCTTCAACAAGCATACAGACTCGAGCACCCTCCGGTGTTCTCCTGAGAACTGTGAAGTCCATGCTCATTCAGATGTAACCAAAAAAGATGTCACCCCACATTTCTTTAAAAAACAAAACAAAAAACTGTGGCTTCTCCTCCTCTGAAACTTCAGCCTCCAACAATGTCCAGATACCCTAGCTTTGTTTTCTTTAGTCTCTGTGATGGAAAATGTTTTCAAGGAAAATTTTACACAGGCTTCTGGTTACACTAGAAGTCCAGTCCAGTAGGATTTTTTTTTTTTTTTTTCAATCGGTTGTTAAGAGGTTTCCAAAACCAGTTTTCAAGCTGTGGTCTTTTCACACACATCTTCTGCACATACGTCACACATTTCAATAAAGCATTTTCAAGACTGTTGGCCACTTGGATTTCTTTGGTGTTGGTGAACTAGCCTAAACATTATTCAGAGATTATATATCTCTAACCTATTTTTTTTGTTTTTGTTTTTTTGTTCTTTTCATGCTTGACTTTGAAGGTCCTGATTTTGTATGAATGCATTACTTTGGATGTGAGAAATAGAAATTGTCAATTATGTGCTTTCCCTTTTCTGCACAAATTCTGGGAAAATGTAAGATCCTTTTTTTAAACATGGTTTGAGGGAACAGCTGTAAGTCCAGTCAGGGCAGTTTAACTTAGATGATCAATTTGACACTTCAGAAGACCTAAAGGTTCATAAAATTCCATCTCATACAGAATACTGTATATTATTTTTTACCAGATATTTTACAAATACCTCACCTCATCCTGTATGTAATCAATAATAATGTATTAGGGTAGAAAGACACAGATTATCAATATAAAAAATATATTTAAGCCCTTCAAATTCTTGTGTCCTTTTCTTTAGTTTCTTAATTAACATCGTATTATTGGAATTACTGAATAAAAATAATTGCAAAGACTGTGATGTAGAGGAGAGAAAATCAATATACCACTGTTTATCTTGGCTATGGCTTCAGGTTTCTAAGAACTAGATCCTGAGTTTTGAGAGGTTTTGGTTTGGTTGAGTTTTGAGTGAGTGTCTAGCATGGAAGTTTATAAGTGTTCTACAATGCTTGTCTTTACTTCCTGTATGGAAATAATTTAAATCTTTCTGCTCAAGATATTCTGGTAGAAATTTAACGTCATGACTCATATAGAACACGTTTCTTCCCCCACCCCCCCAAAAAAACTAGTGAAGAGGAAGACCTGCAGGGGATGTTGAAACTATATATTTTTTCTATTTCTGATACACTGTGTTTTAAGTATCCAGAAGTAATTCCTGTAGGGGTTCATGGGCTTCCCATTCCTGGATATTTAGTCACGGAGAAC EMBV3_41540 TCCCAGAGTGTCCTGCATCCGTATCTGTAACCTTCTGGCAAGGACAGTAACCTGGCTGCT Gene GeneID:535399|LEF1:XM_002688084:129_cdna Constitutive 0 NULL GeneID:535399 6 GENE LEF1 NULL lymphoid enhancer-binding factor 1 EMBV3_43793 AGGCCTCCCTCTGGAACCGTATAAAGATCCTGGCTCTGAGTAAACCAGAAGTATTTGCCC Gene GeneID:505520|MUTED:NM_001098875:205_cdna Constitutive 0 NULL GeneID:505520 23 GENE MUTED MGC159907 muted homolog (mouse) EMBV3_29308 ATATTCTTGACTCAGAGGGGACTGAATAATTTCCACGTGGGCTGAACAACCCGGTAGCCC Gene BVV0102_380641 + 0 NULL GK000004.2:11176873-11624469 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29294 TGAATGCTTCCTTCTCTACGGTTGCCCTCTGTGTTTTATCCAGTCTAACTTTATTGAGGC Gene BVT0102_373205 + 1 EMBV3_17804 GK000006.2:107014452-107195795 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210700 1 XLOC_129210 NonCoding TCONS_00210700 XLOC_129210 NonCoding NonCoding NSG1 6:107019442-107021372 i TSS158207 1930 2 TCONS_00210700_2 72 0.630569948186529 1 0 0 0 0 0 0 0 0 0 0 1.49230314572276e-05 1.18610656078223e-06 0 6.54136094799735e-05 1.21865445859657e-05 4.57573265699439e-05 0.00016421693486332 0.000524736601780206 0.00028601016121071 0 8.5700939068151e-05 0 0 9.50678880921964e-06 0.000173726923331467 0 0 0 0 1.0061353913947e-05 0.000361358200757781 XM_005218896.1 ZNF570 PREDICTED: Bos taurus zinc finger protein 570 (ZNF570), transcript 5e-128 462 75.57 0.301036269430052 XR_247912.1 LOC101929140 PREDICTED: Homo sapiens uncharacterized LOC101929140 (LOC101929140), misc_RNA. 3e-10 71.6 70.17 0.089119170984456 0 noncoding GGAAACTGAACTCTCTCGATAGCTGGGGGAGCCTGGCACGCGGGGCGTCCCTGGCCTCGGGTGAGAACCTGGTCTCAGCTGACGCTGTAATTTCAGCCTCCGGATCATGAGCAAGGAGTCTGCTGGCCTGCACCTGACTCTTGGCCCATGGAACCTGAGATAGTAAATGTGTGTTGCCCTTAGCTGGTAAATTCGTGGTGCTTTGTCATGCAGCGTAGATAATGAAGGCACCTGCATACCTGATTCGTTTTGGTGGAGGAGCAGTGATGTGTCCAGGAAAGACGGACGCTCTTCCCCAATGGCTGCAGAGAGGTCACACGACCCGGCCTCAGCCCCTGAGACCTCCCTGATGACAGGCAAGAAACATACCAGAAGACTCACTGCCTTCCTTCCTGTTTGGTCATGGATGTGTGATGACGTGACACCTGGAGCTGCAGCCGCTCTCTTGGGGCCAGGAGGAGATGATGCCAACAGTCACGGGGGAAAGACTCTGTATCCCCAGTGCTGTTGTTCTTGAGCCTCCAAATGAACCCACCCTGGAGCCAGCCTTTGGTCAGGCTTCCTGCCAATGGAGACGCTAAGTAGCCTCACTGTCTAAGGCCCTTTGGGAGGAGGGTTCCATAATGTGTCACGGAACGCATCCTAGCTGATTTGCTGTACACAACCCTGTCCTGCCTCCTTTGAGAATTACTGTGCAAGTAGGCAAAATAACACTCAAAAGCATCCACACCCTCCTCTCCAGAGCCTGTGGCTAAGTGACCAAAAGGGATTTTGCTGATGAGATTAAGTTAGGGACTTAATTAAATTAGGGAGATGAGGGATTATCCTATATTATCTGAACAATCCCTACACATTGTCACATCATCACGAGGGTCCTTCTAAGTGAAAGAGAGGTGATCACGGAGGCAGAGGGATGGGAGGAGGGCCACGAGCTCAGAGATGCAGAAGCAGGAGGAGACGAGGAAACACGATTCTCCCCAGAGGCTCCAGAGGTAACCAGCACTGCCAGGCACTTCATTCTTCTGGACGCCAGAGCTGTGCAATAATCAGTGTGTTGTTACAAGCTCCTAAGTTTGCGGTCATTTGTTATAGCAGCAATGGGAAGTGAATACACACTCTGTGGGTGTTTGGAAATGAATGGACGCGTGCAGTAGTCACAATGGAACTTTGTAAATTATCGGATTAAACACAAGGAATGTGGTCCTCCTGTGGTGTGACAAGTCCCCTGTCCTTCCTGAGCCTCGTGTCCCCAGCTCTGAGTTGAGGGATGGGACTCTGGGCTTCCTGGGCACTAGGAGGGCCTTGTCGGGGCTGGGATAGTCTGACAGAAGGAGATCAGAATGCCTTCCTTGTTACGGCTTCTTAGCCCTCATTTAAAAGCAGACATTTCATTTCCAGATGCATGGGAGTTTTTAAAGTATCTTTGATATTAATTTCTCATTTGAATGCTTCCTTCTCTACAGTTACCCTCTGTGTTTTATCCAGTCTAACTTTATTGAGGCTTTCTTGATGGCTAAGTCAGAGTTCTCTCTTGGTAAATAACACACTGCGCTTGAAAATATGTGGGTTATTTTCAAATATCTTTTGATTTCGGAATTGCACAGTAATAAGAGAAAAGCTGCGTTATGATTTCAATACCTTTAGACCATGAAATTTCTGCACCTGGTCTTACGTTTCCAGATATGTTCTAGTGTCTCCTGGTTTAGTCTATGGGAACATGAATTGGTATCCTACTGTTGTGTGAAAATGGTATAAATCTTAATTATGTCAAATTGTTTCACGATGCTTTTCAGGTCTACTATATTCTTCTACTTCTCTGTACATTTATTCTATTAATTTCTGAGAGTTTGATATTGAAACTCCAACTAAGAATTTAATTGTAATATATAGTGGAACTATATGTAACTTTGTTCTGTATTTTCCAAGTGAA TCONS_00206120 TCONS_00206121 . 5' 147311 TCONS_00206120 TCONS_00206121 . 5' 147311 EMBV3_25954 CCCCTGTCCTTCACTATCTCCCAGAGTTTGTTCAGATTCACATCCATTGAGTTGGTGATA Gene GeneID:504235|STEAP3:XM_002685438:46_cdna Constitutive 2 NULL GeneID:504235 2 GENE STEAP3 NULL STEAP family member 3 EMBV3_27344 CGGCACACCTTGTCAGGCAGATGTTGACCGTCCAGACCCCCAATAAGTTTTAGTTAGCAA Gene BVT0102_053471 - 0 NULL GK000012.2:49108692-50509650 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00249639 TCONS_00218178 TCONS_00115686 TCONS_00252353 TCONS_00129783 TCONS_00007677 TCONS_00197928 TCONS_00249539 TCONS_00116100 TCONS_00250720 TCONS_00169197 TCONS_00071860 TCONS_00230121 TCONS_00124846 TCONS_00037672 TCONS_00020157 TCONS_00038381 TCONS_00220662 TCONS_00153678 TCONS_00222766 TCONS_00200932 TCONS_00207069 TCONS_00252810 TCONS_00209711 TCONS_00175855 TCONS_00177370 TCONS_00169198 TCONS_00252107 TCONS_00218945 TCONS_00148280 TCONS_00008224 TCONS_00166977 TCONS_00056146 TCONS_00249011 TCONS_00176735 TCONS_00248864 TCONS_00169199 TCONS_00039951 TCONS_00189806 TCONS_00038458 TCONS_00041057 TCONS_00063181 TCONS_00185881 TCONS_00009259 TCONS_00234065 TCONS_00252226 TCONS_00222455 TCONS_00251707 TCONS_00130084 TCONS_00037818 TCONS_00039226 TCONS_00161667 TCONS_00167260 TCONS_00153218 TCONS_00040836 TCONS_00240534 TCONS_00209032 TCONS_00085967 TCONS_00251914 TCONS_00207755 TCONS_00207365 TCONS_00063080 TCONS_00197601 TCONS_00250246 TCONS_00209558 TCONS_00249772 TCONS_00010471 TCONS_00200529 TCONS_00059708 TCONS_00135546 TCONS_00161835 TCONS_00080066 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00116665 TCONS_00250726 TCONS_00249087 TCONS_00223554 TCONS_00020023 TCONS_00070810 TCONS_00251907 TCONS_00107832 TCONS_00109858 TCONS_00019199 TCONS_00218898 TCONS_00122686 TCONS_00218552 TCONS_00031910 TCONS_00157036 89 XLOC_107421 XLOC_152582 XLOC_131641 XLOC_069855 XLOC_155294 XLOC_078496 XLOC_003238 XLOC_119588 XLOC_152482 XLOC_070269 XLOC_153663 XLOC_103305 XLOC_043630 XLOC_139613 XLOC_076389 XLOC_021501 XLOC_010835 XLOC_022206 XLOC_133979 XLOC_093441 XLOC_136073 XLOC_122582 XLOC_125588 XLOC_155751 XLOC_128222 XLOC_105634 XLOC_107144 XLOC_155048 XLOC_132264 XLOC_090162 XLOC_003782 XLOC_101813 XLOC_033949 XLOC_151954 XLOC_106509 XLOC_151807 XLOC_023768 XLOC_115843 XLOC_022282 XLOC_024868 XLOC_037908 XLOC_111934 XLOC_004815 XLOC_143544 XLOC_155167 XLOC_135764 XLOC_154648 XLOC_078795 XLOC_021647 XLOC_023044 XLOC_098554 XLOC_102096 XLOC_092983 XLOC_024650 XLOC_147198 XLOC_127543 XLOC_052005 XLOC_154855 XLOC_126270 XLOC_125882 XLOC_037807 XLOC_119262 XLOC_153189 XLOC_128069 XLOC_152715 XLOC_006022 XLOC_122181 XLOC_036490 XLOC_081769 XLOC_098720 XLOC_048950 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_070831 XLOC_153669 XLOC_152030 XLOC_136854 XLOC_010701 XLOC_042587 XLOC_154848 XLOC_063742 XLOC_065762 XLOC_009879 XLOC_132217 XLOC_074241 XLOC_131872 XLOC_018155 XLOC_095496 Coding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_38279 TGTCTTTGCCACCTACAAGCTCATGCACACATGGCAGACCGTGGACTTCGTCAGGAGGAA Gene GeneID:508591|MIOX:NM_001101065:19_cdna Constitutive 0 NULL GeneID:508591 5 GENE MIOX NULL myo-inositol oxygenase EMBV3_24904 AAACACAGGAGCCGGAGCAGAAGCAAAGAGAACCAACTTCTTCTTAAAACAGGCAAGAAG Variant GeneID:532701|RSRC2:NM_001102146:225_cdna 220^297 4 EMBV3_16473 GeneID:532701 17 GENE RSRC2 MGC143309 arginine/serine-rich coiled-coil 2 EMBV3_42318 GACTGGAGGAGGAATTAGCTTGAAGCATGGCCTGAAGACATGTTTGTTTGTGACATCAAT Variant GeneID:508345|APIP:NM_001075352:33_cdna 355^403 2 EMBV3_31536 GeneID:508345 15 GENE APIP MGC142303 APAF1 interacting protein EMBV3_34877 ACAATGATAAGACGCGCTACATGGGGAAAGAAGCTGAACGTCGTGGAGCAGGAGAAGATC Variant GeneID:281141|ENO1:NM_174049:7_cdna 320^378 1 EMBV3_17108 GeneID:281141 16 GENE ENO1 MGC127526 enolase 1, (alpha) EMBV3_38840 GCTCTATAGCTGGTAGGAGGGGGAAGGTAATATCTTATTCAGTTATCTTTGTCTTGGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23269 GGAATCTAAGCAACCAATTTTAAGACTGAGCACCTACTTGTGCTCAGCCCCAACTGGTGC Gene GeneID:280836|LEP:NM_173928:134_cdna Constitutive 1 NULL GeneID:280836 4 GENE LEP NULL leptin EMBV3_35790 ACCTGCACGTACCCTCAAAAGACCAAAGGAAAGACGGCAGTAGAGATGGAGCTGAAGGTA Gene GeneID:613958|LOC613958:XM_002688186:133_cdna Constitutive 0 NULL GeneID:613958 6 GENE LOC613958 NULL similar to Matrix extracellular phosphoglycoprotein precursor (Osteoblast/osteocyte factor 45) (OF45) EMBV3_04669 TATATACTGCTGACTGGAGCGCTGCAATTCGTTTGTCTGAGAATACAGATCAACCCACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08817 GATCAGAGTGTCAGCACCAAACGCATAACTGATACCAGCCAAGGAGGACTGCGCCCCTGA Gene BVT0102_215512 + 0 NULL GK000016.2:44688067-44783270 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069334 1 XLOC_041917 Coding TCONS_00069334 XLOC_041917 Coding Coding TMEM201 16:44773572-44797225 j TSS51712 4013 1 TCONS_00069334_2 668 11 0.830796549974632 0.00120870562020532 0.000207251827699868 0.000523932556666876 1.95762645829475e-05 0.00014822797565419 1.29741195453522e-05 2.12757609577253e-51 6.51728532789821e-06 1.44581902189672e-48 0.00015716951024783 0.000107337505884621 1.06922923380735e-05 1.70311264454271e-05 7.2273214842592e-36 1.0327386039012e-05 0.00140888505355228 0.000231678961437431 0.000350134574983891 0.000713481863351166 0.000772750461587969 0.000244013153789745 1.10949414501483e-05 6.94884363940401e-05 1.8063649124714e-05 0.000564501960881384 0.00077795141622215 0.000422695419887819 5.05625396666564e-05 7.95798668785701e-06 5.26668732481672e-05 XM_005216953.1 TMEM201 PREDICTED: Bos taurus transmembrane protein 201 (TMEM201), 0.0 3977 100.00 0.549215051083977 NM_001130924.2 TMEM201 Homo sapiens transmembrane protein 201 (TMEM201), transcript 0.0 2574 83.50 0.607525541988537 TCONS_00069334_2 sp|Q5SNT2|TM201_HUMAN TM201_HUMAN Transmembrane protein 201; 0.0 1030 85.65 0.998502994011976 2 coding 0 0 0 0 0.106448645545256 0.531554082193006 0.038598530862673 0.489976565765415 CCGAGTCAGGAGGCGTGCCCGCGCCGGCTACAAAGCGACGAAGGTCACGGCGGGAGGAGGCGCGCGCCGCCGCTCCGAGTCCTACCCGCGGCCCTCGGCCCTGCTGCCGCCGCCGCCTGCCACCGCCCACCGCTCGCACCGGGAACCATGGAGGGAGTGAGCGCGCTGCTGGCCCGCTGCCCCACGGCCGGCCTGGCCGGCGGCCTGGGGGTTACAGCGTGCGCCGCCGCCGGCGTGCTGCTCTACCGGATCGCGCGGAGGATGAAGCCAACACACACTGTCGTTAACTGTTGGTTCTGCAACCAGGACACGGTGGTGCCCTACGGGAACCGCAACTGCTGGGACTGCCCCCACTGCGAGCAGTACAACGGCTTCCAGGAGAATGGTGACTACAACAAGCCGATCCCCGCACAGTACCTGGAGCACCTGAACCACGTGGTGAGCGGCTCACCCGGCCCCCGCGCCCCCGCCCAGCCCCTGCAGTGGGTGAGCAGCCAGGTGCTGCTGTGCCGGAGGTGCAGCCACCACCAGACCGCCAAGGTCAAGCAGCTGGCCGCCTTCTCACCACGTGACGAGGGCAGGTACGACGAGGAGATCGAGGTGTACCGGCACCACCTGGAGCAGATGTATAAGCTGTGCCGGCCGTGCCAGGCAGCCGTGGAGCACTACATCAAGCACCAGAACCGCCAGCTCCGCGCCCTGCTGCTCAGCCACCAGTTCAAGCGCCGGGAGGCCGACCAGACCCACACACAGAGCTTCTGCGCGTCTGCGGTGAAGGCCCCAGCACAGGTCATCGTGCTCCGGGCCCTCGCCTTCCTGGCCTGTGCCTTCCTGCTGACCACAGCGCTTTACGGCACCAGCAACCCCTTTGCCCCGGGAGCCCCGCTGCCCCCGACCCTGCCAACTGGTAGCAATGGCTCGGCCCCACCAGACAACGGAACAGCCACCGGGGCTGAGGGCTGGCGGCAGCTGCTGGGCCTGCTGCCCGAGCATGCGGCCGAGAAGCTGCGCGAGGCCTGGGCCTTCGGGCAGAGCCACCAGATGGGTGTCGTGGCGCTGGGCCTGCTCACCTGCCTGCTGGCCATGCTGCTGGCCGGCCGCATCAGGCTCCGGAGGATCGACGCCTTCTCCACTGGCCTGTGGGCCCTGCTGCTGGGGCTGCACCTGGCTGAGCAGTACCTGCAGGCCGCCTCACCCAGCTGGCTGGACACGCTCAAGTTCAGCACCACGTCCCTGTGCTGCCTGGTGGGCTTCACAGCAGCCGTGGCCACGAGGAAGGCGACGGGCCCACGGAGGTTCCGGCCCCGAAGGTGCTTCCCAGCAGACTCCGTCGGCCTCTTCCCCACCAGCCCCAGCCTGGCCATCCCCTGCCCGAGCCTGAGCATCACGGGCCCCTCGCCATCTTTGTTCGTCCCCACCCCGCCCGGCTTCCTGCCGATCGCCAACCACCAGCTGTTCCGGTCCCCCCGCCGGGCCTCGCCCTCCTCGCTGCCTGGCCGCCTCAGCCGGGCCCTCTCGCTGGGAACCATCCCCTCTCTGACACGAGCAGACTCAGGGTACCTGTTCAGCGGGAGCCGCCCTCCATCTCAGGTGTCCCGACCCGGGGAGGTCTCAGTTTCAGATTACTTCTCTCTGCTGTCGGGCAGCTGCCCCTCCTCCCCGGTCCCTTCCCCAGCGCCCTCCGTGGCAGGCTCGGTGGCCTCCAGCGCCGGCTCCCTGCGCCACCGCCGGCCCCTCATCAGCCCGGCCCGGCTCAACCTGAAGGGGCAGAAGCTGCTGCTGTTCCCATCGCCCCCTGGGGACGCCCCACACACCCCCAGCAGCTCCGACGAACACTCGCCCCACAACGGCAGCCTCTACACTATCGAGTCGCCCCCGGCCCCACAGAAGCAGCCAGCACGGGACACAAAGCACACGGCGGACACGAAGTCAGTGCCAGAAGGGGGCAGCAGCTGCAGCAGCCGCTCCATCAAGAAGGAGGACGACTCATCCCAGTCCTCCTGTGTGGTGGACACCACCACCCGAGGGTGCGCCGAGGAGCCCACCAGCTGGCGAGGTCGTTTTGGCCCCTCCGTGATCCGGGGCCTCCTGGCCGTGAGCTTGACCGCCAACGCCCTCTTCACCTCGGCCTACCTGTACCAGAGCCTGCGCTGACCCGTGGTCCGCAGCCTCCTGGCACCCGGAGAACCTCGGAGGGTGCGCCCAGGTGCATGCCGCTGCCACCACTGCCGGCCTTGGCCCTCCAGAGGGCCCGCCGCCTCCGCCCTCTTCTCCAGGGCCCTTGACCTCGCCTCCGGAGGGAGCCCTGTTCCCCGCCGCCTTCTCCCCACCTGACAGACTCCGGGGCTGGGCGTGGTCTCAGGGGCGCAGTCCTCCTTGGCTGGTATCAGTTATGCGTTTGGTGCTGACACTCTGATCCCCAAGCCGGAGATCCTGGAGGGGCTGCGTGACTCTGGGGTCCCCTCCCTACCGTCCAGCCCTGCCTGGCAGGAATGCCACTACTACTGTGAGGGGAGCAGGAGCTGGGCTGCCCCCCAACCCCGCATCCCCGGGCTGTGATCACCTCTTTGTACTGTACTCCTTGACCCGGTCAAGTGGAAGGTAAAGCCCCGGTGGACACCCCCTCGAGGACCAGCGGCATCTGCCTATGTCCTGCGCCATGCTGTGGGCTGGGCCTGCCCTCTGGCTCCCCCGGGTGGGCAGTGAGTTTCCTGCCCAGGGCTTCTCAGAGTTCCTGGGTCTCTGGGGCCCAGCGGGACTAGTGTAAGCACCCCCGCAAGCTCCCTTCTCCCTGCTGTGCCCCCATTTTATTACCTCTGGTGACCTTCCCAGGCAGCAGCCCGGCCACCCTGAGAACACTACCCAGGGCCACCCTGTCTCCAGGCCCCTCCCTCATGCACTGCCCTCAGGGGCTTTGCTGGGCCCCTCTGCCCACAGGTCTCTGAGGACCCTGGACCCCTGCCCCCATCCTGCCGTGAACTCGGCTCCTCTGGGCGTCCTGCGGCCGCAGTGGGCTCAGTGTGACCTCTGTCTCCAGGCCACCATGGCTGGCCTGCTTCCTACCCCGAAATCCTCGGTCCTGCCACTGCCCTTCCAACTGATACTGCAGGTTTGTGCCCCACGCAGCCCCCCGACCTTGGGCTGGAGTCCCATCCTGCCCTCAAAAGTCGGGCACAGGGACCCTCACGGTGCCGTGAGGAATGAGAAGACTGCGGGAGTCAGCATCCCCACGTTGCTGTCCCCGGCTCTGGATGCAGGTGTGGGGCGGCGTGCGTGCACACTCCTACGTGTGTCTGTGCACGTTTGTGCCACTCGGTGAACTCTGAGTCTCCTTAGGGGGAGGGTCGTGAGAGCAGGGGAAGGGTCTTCATTCTGTCATTCAGGGATAAAGTTTAATTTTATTTTTCTACATATTTTTGCCAGGTCAGGCGTTCCGCTCCTAAGCAGGATGCCCCCAATTCTCCCTGCCAGGGAGGTTTAGTTTTTTTAAGCTTTGGGTGCTTTTTTAGTATTTTTTTTTTTTTTTTTTTTACCATGTGGGGAAGGATTGCTCTGACTTCCCCCACTCCTGAAAGCTACTGTTTCCTGCCCTGCCCCCCACCCCGGAACACGGGGAATTGGGGGGCCGGGGGCCACTTCAGGTCCCTGACTCCAACTGCCAGAGATGGTTCCAACTCGGAGGTGATGCCTCTTGGCCCCCATCTGTACAGTGGGCATGTGTGTCGAGTTTTTTAATTTTACTTTTTGCCTAACCAAGCCAAACTCCATTCCCGAATGCCCTTCTTCTTTGGCTCTGAGGAAGCTCCAACTGAGTGCCCAGCCCTCTTCTTTCACCCTGGCCAGCCAGGCCCCTCCTGTCCAGGGCCTGTGGTCCCAGCGCCCCCCAGGGGCAGGGGAGAGGCTGGGCCAGGAGGGGGCTGACTTATGTTTTCTTTCAAATAAAAACACAACCTTATTTTTCTTTACAAAAGCAGAAAAGGAAACCAAAAAAGATACCAACCTTTGAACTACAC EMBV3_27590 GCATGAGTGTCGGGATATTCAACCACCAGATGGGAAGCCAAAAGACCGTATGCTGCAGGT Gene GeneID:513469|LOC513469:XM_002689479:14_cdna Constitutive 0 NULL GeneID:513469 8 GENE LOC513469 NULL similar to pleckstrin homology domain containing, family B (evectins) member 2 EMBV3_08705 CTATCATTGAAGCAACTCACGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCCATGAGC Gene GeneID:516630|LOC516630:XM_002690300:3_cdna Constitutive 0 NULL GeneID:516630 9 GENE LOC516630 NULL similar to SNF2 histone linker PHD RING helicase EMBV3_00755 TTTGAAAACTGCAAGATCAAAGTCAAGGATGACGAGCTGGATGCCACGTTCAAGGAGGCC Gene BVT0102_435657 + 0 NULL GK000006.2:108852807-108855229 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204149 TCONS_00204150 TCONS_00204148 1 XLOC_124354 Coding TCONS_00204148 XLOC_124354 Coding Coding MFSD7 6:108852968-108855312 x TSS152776 379 3 0.839521980367051 4.28607143305345e-268 0 7.80877749677428e-05 0 1.20781015964381e-07 0 0 1.32443443572936e-07 2.00369023712643e-09 0 2.07548417311702e-24 0 0 0 0 0.00559692197273568 0 0.000125618740477913 0.00029989355436186 1.64125387530632e-18 4.15188748099506e-159 5.51047606779523e-18 5.54264829783497e-05 1.96533308292467e-37 0 0 1.61125412218351e-49 1.79484190148992e-36 5.47085950423719e-10 5.91104661408616e-05 XR_231477.1 MYL5 PREDICTED: Bos taurus myosin, light chain 5, regulatory (MYL5), 3e-103 378 100.00 0.548812664907652 NM_002477.1 MYL5 Homo sapiens myosin, light chain 5, regulatory (MYL5), mRNA. 9e-28 127 86.92 0.277044854881267 0 coding 0 0 0 0 -0.104247685981126 0.446730162434265 0.013714333091138 0.768010494059267 GTCATCAGGCGCGGCGCGCGGCGGCTTCCGCATGGGCAGTGGCCGGGCAGCGAGTTCGCGTTCCCTGCAGCAGGTGCGACCCTCCTGCGAACCAGGTTGAGCACAAATCGAGGCCCGCACACCTCGGGTACAAATATTTGAAAACTGCAAGATCAAAGTCAAGGATGACGAGCTGGATGCCACGTTCAAGGAGGCCTCGGGGCCCATCGACTTCACCGTGTTCCTGAACGTGTTGGGGAGCAGCTGAGGGGTCTCCCCCAGCTTCCTTCCACCCCCACACACAAACAAGACAGAGCCTGGAGTCCAGTTCCTGTAATTCATCTGCTGGCTGCAGCCTTGGGGACCCTCCACTCCCTCCATGCCGTCCTGGGCCTGACAC TCONS_00206205 TCONS_00206207 r 5' 0 TCONS_00206203 r 5' 98 EMBV3_42944 AGGAAGTGGATTGTCTTACTGCCCTTGCCCATCATTTGGAAATGGATCCAGCTCAGGCTG Gene BVT0102_065840 + 1 EMBV3_22282 GK000003.2:66769752-66795565 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00611 TCTGAGTAAAAGAGGGGCCCAAATGCCCACGATATGGGGTCAGTGACTGTCTAGGAGGAT Gene GeneID:525364|CSDC2:NM_001076877:180_cdna Constitutive 0 NULL GeneID:525364 5 GENE CSDC2 MGC139664 cold shock domain containing C2, RNA binding EMBV3_11083 AGTGAGGAAATTGTTCCCAATAGTGTTGAGGAACAGCTTCTCAGACTGAAAAAATACAAA Variant GeneID:282208|CSN1S1:NM_181029:14_cdna 377^430 5 EMBV3_40390 GeneID:282208 6 GENE CSN1S1 CSN1 MGC133694 casein alpha s1 EMBV3_13372 GACCTGGTGGACCTCATGAAGAAGTTTGTGGAGGATACGAAAAACGAGGTGCATGAGAGG Gene GeneID:516036|CBR3:NM_001075734:54_cdna Constitutive 1 NULL GeneID:516036 1 GENE CBR3 MGC142636 carbonyl reductase 3 EMBV3_14661 GATTTTACTGAAGAAGAGGAAGCCCAGGTACGCAAAGAGAACCAGTGGTGTGAGGAGAAG Gene GeneID:511264|SKP1:XM_002685924:55_cdna Constitutive 0 NULL GeneID:511264 3 GENE SKP1 NULL S-phase kinase-associated protein 1 EMBV3_37548 TGCAGGAAGTTCTGGATCACAGCTGCCTCAAATCCAGACGGATGTTGCACTACCATCATG Gene GeneID:535331|RBM45:NM_001130753:32_cdna Constitutive 0 NULL GeneID:535331 2 GENE RBM45 NULL RNA binding motif protein 45 EMBV3_30208 GGTGCTATTGTCTCAGGTACCTGAAACCAACCAGCCTACAAGAACCAAACAGAACTTCAG Gene GeneID:518785|LOC518785:XM_002691468:332_cdna Constitutive 2 NULL GeneID:518785 11 GENE LOC518785 NULL similar to ATPase family AAA domain-containing protein 2B EMBV3_27859 AGCATGCACCTGAGCTCCTGAGCGAAGGAGATCTTGGAAACAGAAGGAGATGCTTCACAA Gene GeneID:614354|LASS3:NM_001099389:59_cdna Constitutive 2 NULL GeneID:614354 21 GENE LASS3 NULL LAG1 homolog, ceramide synthase 3 EMBV3_09686 TCCAGGGTTTCCACACATGGCTGAAATGACCAGGGCTTCATTAATCGACTGTCCAGTGTG Gene BVV0102_010988 + 0 NULL GK000022.2:7341847-7383751 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125878 TCONS_00125875 TCONS_00125877 TCONS_00125874 TCONS_00125876 1 XLOC_077324 Coding TCONS_00125875 XLOC_077324 Coding Coding TRIM71 22:7278499-7345063 j TSS94574 6571 1 TCONS_00125875_11 514 0.0451985999086897 4 0.901341586166489 0.00054954138539591 0.000116865282529295 0.000311335284919149 1.14440284962544e-05 0.000100840659313742 7.34632734645425e-11 0.000127860295027407 0.000117569883637014 4.77304288002046e-22 0.000377808312353202 1.27930959070711e-34 4.67455348148866e-60 7.25879362527691e-05 2.55048903744485e-05 4.35449718603244e-05 0.00245273204229165 3.9876240051654e-13 0.00163627863807777 0.000140543252866204 6.65581783580398e-43 9.11523956816599e-05 0.000949869007337898 0.000335383564052771 0.00214968143735367 0.000210885840425485 4.67628782776728e-05 5.62425209745038e-05 9.40685113680725e-05 1.07436058311305e-08 0.000461718855620321 XM_610389.5 TRIM71 PREDICTED: Bos taurus tripartite motif containing 71, E3 ubiquitin protein ligase (TRIM71), mRNA. 0.0 4944 100.00 0.416983716329326 NM_001039111.1 TRIM71 Homo sapiens tripartite motif containing 71, E3 ubiquitin protein ligase (TRIM71), mRNA. 0.0 2787 87.79 0.33952214274844 TCONS_00125875_11 sp|E1BJS7|LIN41_BOVIN LIN41_BOVIN E3 ubiquitin-protein ligase TRIM71; 0.0 1059 100.00 0.998054474708171 0 coding 0 0 0 0 0.114708585812015 0.40403324241542 NA NA GAAGGAAATCTGTCCCCCACCCGCCGCCCCATTTTATTGAGATATAACTGATACGTTCTGGGTTTATTCCATAATAATTTTTGCACTCCTCCCACATTTGGGTGAATGTTCACTCAGTTCAGATTTGCTCCAGGTGCCAAGGAGACAGCAGCAGCAGACTAGGTCTGCCGGCTTGTCCTAGAGTTCTTCCCATCTCAAGGCAGCACCAGGCCCCATGATGGCTTTGTCCCACTAGGGTGGTGTTTCTGCAGCATGGGGCCTTCAGCATGTTAAGAGTTCCCTGCAAATCTCTGTGAAATCTGGTGAGCTGCAAATGTGTATGTAGTTTTTTTCTTTTATATTTCACATTTATGATACAAGCATGGATGTTTAGCTTGGGCACCAAGTTATTATTTTTTGAACTTAGTTTACAGCCAGTTTTAATTTTGCACAGATCTTAAATGGCATATCTAGAAGTTTTGACAAATGTACACACAAATACCCTTTCATTTCCCCAGAAGGTTCTCTCCTATCCCCTTTCCCAGTCACTACTCTCTCACCCTCGAGGGTTCTTTTCCTATCTCAAAGCTTAGTTATGCCTGTTCTAGAATTTTCCGTATACAGAATCACACAGTTTGAACTTTGTGTTTGGTTCCTTTCTTCTAACATGATGTTTTTGAGATTCATCCAGGTTGTTTGCATAAGTGGGAGCCAAGCTGTCACTCACAGCTTGATGCTGTTAAGACTGGGACAATCGGTCCACCCGATGGCCTCACTATATACCCTCTAAATCCTGCTATTTGGCCCTCTCCACTCTACCAAGTCAGTCTCTCTCCAGGGCCCAGCGAGTTCCTCTAACCAGAACCGCCCAGGCAGCCTCGGGTAGCACCCAGATGGCCGCGGGGCCATCACCCGGGACCTCCCCCGAACAGCTGCCCTCTGCCCCCTATCTCCACCCCCCCAGTAAAACGCCAAAAGAAACTGGCCCCCAGCAGGTCGAAATTCAGATTCGTTTAATTCCAAACTGCGTTGATGTTTTGCTGTTGATCACAGATATGCAGAGTCCTTAAGAAAACGAAAAAAAGAGAAAGAAACCGGTGTCTGGGGCGGGGGTGGGGGTGAGATCTCACGGGCAGTGGATATCAGCCTCTGCAGATTCAGAATGAAATCTTTTCTTTTTTAAATAAACGGAAGAGTCGCTCTCCACTCCGCGCTCAGAGGGTTTCAAAGGTCGTCACACTGAAGCCCGGGGGCGTTCATCTCCCCAGCTGCCGGGAGAAGGGAGGAGGTTGGAAGGAGGAGGGAGGGAGCACACAAAAGCGAGCCGTGCAGAGAGGGCTAATGTTTCCTGTTTGCCTGGAACCCCCTCCTCTGTGTCCCCTCCCCCAGCCCCCTCCCAGCACTCGGGCGGAAGTGAGTTTGCTCCTTTGGAGATTAAAAGGATTCCGAATTCCGATCAGTCCCAATAACCAATGTACTGAGAGGAGGAGGAGGAGAAGGAGGAGGAAGAGGCGGCAAAGCTGAGAAAGGGGGGACGCGCGCGCGTGCACGCACGCAGCCCGAATTGCGGAGTTGTTCAAAGCCCCAGGCGGTCAGGGCGCACAGCGCGAGCCAAGCCCGGTGCTGCACCTGTACTGCGACACATGCTCCGTGCCCATCTGCCGCGAGTGTACAGTGGGCCGGCACGGCGGCCACAGCTTCGTCTACCTCCAGGAGGCGCTGCAGGACTCGCGGGCCCTCACCATCCAGCTGCTGGCCGACGCCCAGCAAGGCCGCCAGGCCATCCAGCTGAGCATCGAGCAGGCCCAGACGGTGGCAGAGCAGGTGGAGATGAAGGCGAAGGTGGTGCAGTCGGAGGTCAAAGCTGTGACTGCGAGACACAAGAAGGCCCTGGAGGAGCGGGAGTGTGAGCTGCTGTGGAAGGTAGAGAAGATCCGCCAGGTGAAGGCCAAGTCACTGTACCTGCAGGTGGAGAAGCTGCGGCAGAACCTGAACAAGCTGGAGAGCACCATTAGCGCCGTCCAGCAGGTCCTGGAGGAGGGCCGGGCGCTGGACATCCTGCTGGCCCGGGACCGCATGCTGGCCCAGGTACAGGAGCTCAAGACCGTCCGCAGTCTCCTGCAGCCCCAGGAGGATGACCGGGTCATGTTCACACCCCCCGACCAGGCCCTGTATCTTGCCATCAAGTCCTTCGGCTTCGTCAGCAGCGGGGCCTTCGCGCCGCTCACCAAGGCCACAGGCGATGGCCTCAAGCGGGCCCTGCAGGGAAAGGTGGCCTCCTTCACCGTCATCGGCTACGACCACGACGGGGAGCCACGGCTGTCGGGGGGTGACCTCATGTCGGCTGTGGTCCTGGGCCCTGATGGCAACCTGTTTGGTGCGGAGGTGAGCGACCAGCAGAACGGGACATACGTGGTGAGCTACCGGCCGCAGCTGGAGGGGGAGCATTTGGTGTCGGTCACCCTGTGCAACCAGCACATCGAGAACAGCCCCTTCAAGGTGGTAGTCAAGTCTGGCCGCAGCTACGTGGGCATTGGGCTCCCCGGCCTGAGCTTTGGCAGCGAGGGTGACAGCGACGGCAAGCTCTGCCGCCCATGGGGCGTGAGCGTGGACAAGGAGGGCTACATCGTGGTGGCCGACCGCAGCAACAACCGCATCCAGGTGTTCAAGCCGTGCGGCGCCTTCCACCACAAGTTCGGCACGCTGGGCTCCCGGCCGGGGCAGTTCGACCGGCCTGCCGGGGTGGCCTGCGATGCCTCCCGCAGGATCGTGGTGGCCGACAAGGACAATCATCGCATCCAGATCTTCACCTTCGAGGGCCAGTTCCTCCTCAAGTTCGGGGAGAAGGGCACCAAGAACGGGCAGTTCAACTACCCCTGGGACGTGGCGGTGAATTCCGAGGGCAAGATCTTGGTCTCAGACACGCGGAACCACCGCATCCAGCTGTTCGGGCCCGACGGGGTCTTCCTGAATAAGTACGGCTTCGAGGGGGCTCTCTGGAAGCACTTTGACTCCCCGCGGGGCGTGGCTTTCAACCACGAGGGCCACTTGGTGGTCACCGACTTCAACAACCACCGGCTCCTGGTCATCCACCCGGACTGCCAGTCGGCCCGCTTCCTGGGCTCCGAGGGCACGGGCAATGGGCAGTTCCTGCGGCCGCAGGGCGTGGCTGTGGATCAGGAGGGGCGCATCATCGTGGCCGACTCCAGGAACCACCGAGTGCAGATGTTCGAGTCCAATGGCAGCTTCCTGTGCAAGTTCGGCGCCCAGGGCAGTGGCTTCGGGCAGATGGACCGGCCCTCCGGCATCGCGGTCACGCCGGACGGGATGATCGTTGTGGTGGACTTCGGCAACAATCGAATCCTCATCTTCTAATCACATTTCCTGGGCTTCCGTGTTTGGGGTGCACGTGTATCCATCTCTCCTCTCTGTCTCTTTCCCCCCCTTTTGAATTTCAAAGAGGAAACTGTCTCAGGGAAAAAAAAAATTTTTTTTTTTTTTTTTTTTTGCTTTTGTTTGAAAGACAACAAGAAAAGTACAACATTGCTTACGTCCTACCTCATCTTTATTTTTTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATATCTCTATCTACCTCAGAAACCTTTTACCTTTCCTTCTCCGACAGGCCCTCTGCCTCCTCCCACACTCGCTCAGTGGGGGTTTCCCTCCCTCCTCCATGGGGTGTGACACGCACAAGCCTAGCATCTCTGTGGCTGGTGGGGGGGCACTGGATGTGTGCGGTGGGGTGCATTCTGTAGATTGAGCCAAGGAAACATGAGAAAACTACTAAGTGAAAAGAAAAAAAAAAAAAAAAAAACTATAAAACATGGAAAAATAGGATTTAAGATTCTTAATTGTAGAGTATTTGTGTTCTTAAGAATACTGTGTTTATGGGGTTAGGTTGTATTGTGTGATCTTGATCTTTCTGGGAAAAATCTTTTTTTTTTTTCCTTTTTTTCTTTATTTTTTTTTTTTAATGCTGCAACAGAGAACTTTCCTGTGTTCTCCTTTTATACCTCAGTGTGTTTCTCATCCTGTTCAACATCAGCATGTTTTCTTACTCCTAGAAGATGTGGCTGTGGCTTGCTAGCCGAGAAACGCTGACCGTTCCTATTTTAGGGTATGCAGTCTTTATTTCTTCTGAGGGAGGGGGTGTGTGTATGTGTGTGTGTATAAGAGAGTGCAACCACCTTACACCAAAATAGCAAAACTAAAAATGCTATACCACCTCCCAAAGAACTTTCCTCTCACACTTTGGTTTCTGATAAATAGATGTAGTTCAGGCTTTTTGATTAAAAGTATTCTCAGAAGTTAAGTGATTTTTCGTTTGCTGTTGGTTATAAAGAATACATTTGAAGGAAGAAGAAAAGTCCCCTCCTTCTAAGAATGAGGATTTTCAGGCATGGACTGGAGCGTGGACGTGAGTGGGTGGTGTGCATGTGCTGAGTCGGTCAGCAGAGAGCATGAGACACAGGCGAGGGACCCCCAGACTGCGGTTGATTGTGGTTCTCTGAACACTAGGCGTTTCTCCTCCTAAGATAAGTAGGCAAAGGAATCAACTTTTGTTTTAAAAGCACAATTTTTTTCTGCTTTGGAAGTTCAGGGAGATGGGATGTTTGCAAGTGCAGTAGGAACAGCCCGCTCCCACGCCCTCTCCTCAGCTCACCTTCACAGAGCAGTCTGCTCCTGCGCCACGGGGCGTGGTTCGTTTTCCCCGCAGAGGCCTTTGAATGTTAAGGGTTTGTAAGCCAAAATCACCCCAACCTGAACAACGTATAGGACAGAATACCTCTTGTTCAACCAAAGAAGGAAGATGTAGGAAGCCAGTCTTCCCAGCTGTGGAACCATGAGATGGCATCTGCCACTTTACAGGGTGGGTTTGTCAGGGGTTGGACTAGGGTGCAGAGCCTCGCGCTTCTGAGCCTTGGCCGTCTTGGAAATAACTAAAGTGAGAACCAAATTTCAGAGGGGCTCCAGAGAGGGAGGTGCGCCTGGATGGCAGTGTTGAATAGGATCTGTCCCCTAACAGATCAGTGTCTGGCCCTGTACTGAGGAGAAATTCCTCTTGCAGTATGGCTAGGGTTTTTAACGAACAGAATAACAAACGGAACAACTCTTGAAGAAAAGGAGATGATGGGAAACAGTGTAGCCAGCAAATCAAATCGCTTTTCCCATCCAGCTTTTTGGGACATTCACCATGTTGCGGTCCCCCATCTCTTCCCATTGCTTTATCTCTGGGGTCTCTAAGTGACCAAAATGGGGAGAACCTCGTTCCATAAAGGAGAACCACATGCAATGAAAGAGCCCCAAACTGGAAAGCAGCTTCCAATTCCCGTCACCCAGATGCAGTGTTGCTGGGTAGGGAGGTGTCAGGAGACTTTGTTCGGTAAAAGCACCTCTTCTTTTATTGAAGAATTTAATAGTGATTCCCTAATAGTGAATTCCCCTCTGATTCCTATTCGGTTGTCTTTTATGTTGTCCCTAACTTCTCAGTTCTTTGACTGGTAAAGAGCACATGTAATTAAGCTTTTTTTTTTTTAATTTTGGAATAACTTGGTGCTGATCCTCCTCCTCTTAGTCCTTCTGCTCCCCCAAATAATCACCAAAGACAACTGATTTTAAATGCTTAATTTTTCTTTTTTTAGCTGTGGGGGGGAGTGGATCTTGAAAATTCTTTGAAATGTTCTCTGAAACTCAGGTCACGATTATGGTTGGGCTGAGTTGTTGGAGGTAGTCACTACCTTCGTTTAGTCTGTCTTTCGCTTCATTATCTTTACTCTCACTTCTGCTTCCCAGTCTCCCCATTTGTGGGGAAGTATTGGGACCGGAGTGAGAGAGTAGCAGTAACTACGGCTGCTTCTTGAAAGTTTGTCTGTGGATCTGGTTGTGAATCCAGGGTTTCCACACGTGGCTGAAATGACCAGGGCTTCATTAATCGACTGTCCAGTGTGCAGGCTTAAAGCAAACAGGCCCCCTCCTTGAAACGAGCATGGAGGGTGGATGACGCAGCCTCTTCACTCTTTGTAAAAGATACATCTCCTTACCTTGCCTGCGCCTAGGATTGTGCGTCGCCATTCGAGAAACATGCTCACACTTGGGAAGCTTTTGTTTGTAAAACACTGCCATCTGCGGCTGCTTCCGATTGACTCCTGACCCACAAGGGATTGGTGCAAAGCACTCGGAGTGTGCTTCTTGGACAGTGTGGAATGCTCCGGATCAAAGAGTCATGAGAAAGGCTAGCCTTTGGAGCTCCCTAGAACGAGTGAGGCTGTTCACAATAAGTGGGTACCAGTGCAGGTCTCCCGCCCCTTAGGAGGTGTGACACCAGGGCAGCAGGAATTGGGTCAGAGCAGGAGTCTTTAACGTGGTGTGAAGATAGGTTCCTGGGTGCTGTGAGGGAGGAGGATAAAATGCTTCTGTTCAGGAATGTGATGCTGAGACAGTAATCCCCGTGTATGTCCGATCTGGTCAGGGGATGGGGTGGGGTCAGTATATGGTTTGAGATACCAATTGGATTTAGATGTACAGGTTTAAATATTGCAATGGC EMBV3_20408 CCACACAACCCTTGCCTTCAAATAGTGACTGGTTCTGGGGTGGACCCATGACTCAAAAAG Gene BVV0102_201492 + 0 NULL GK000008.2:102776542-102784500 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226475 1 XLOC_138012 Coding TCONS_00226475 XLOC_138012 NonCoding Coding GNG10 8:102783158-102789207 j TSS169323 425 1 TCONS_00226475_2 89 0.635294117647059 3 0.930224867724868 0.000404972524427363 6.96506706859483e-21 0.00138684136297542 6.56573347329566e-05 3.53681092628228e-19 6.10711431766772e-15 5.63850034736061e-21 4.82222976294783e-20 3.57717226256862e-05 1.65194090620949e-35 1.33996007776435e-16 1.5202465425385e-36 4.57188315529265e-23 0.000195149879411487 1.98928697143475e-48 3.73393533890095e-17 8.73453983589813e-35 4.19970471141162e-32 8.88963654059206e-19 5.18163891388545e-17 7.4930837788014e-15 6.31099330686697e-43 7.98417141552693e-20 5.94851256628805e-26 3.70569284603274e-11 6.42103463352347e-05 3.12419204928227e-13 4.23036810909304e-22 5.01537189102559e-19 1.67710128814899e-14 XM_005210514.1 GNG10 PREDICTED: Bos taurus guanine nucleotide binding protein (G protein), gamma 10 (GNG10), transcript variant X1, mRNA. 2e-162 574 100.00 0.745882352941176 NM_004125.3 DNAJC25-GNG10 Homo sapiens DNAJC25-GNG10 readthrough (DNAJC25-GNG10), mRNA. 2e-44 183 90.30 0.312941176470588 0 noncoding 0 0 0 0 -0.161316455406937 0.3048612545439 0.00195002119164099 0.970667034419352 ACCCCACATCCTGCTCTTGGCCAGGTGCAGCTAATCTGAGCATTCCAATACCACACAACCCTTGCCTTCAAATAGTGACTGGTTCTGGGGTGGACCCATGACTCAAAAAGGTCTCTCAGGCGGCCGCGGAGCTTCAGCAATACTGCATGCAGAATGCCTGCAAGGATGCCTTGCTGGTGGGCGTTCCAGCTGGAAGCAATCCCTTTCGGGAGCCCAGGTCCTGTGCTTTACTCTGAAGACTGGTGGCGCAGTGGTAAAGAATCCGTCTGTCAATGCAGGAGATGCAGTTTCGATCCCTGATCTGGGAAGACCCCCTGGAGTAGGAAATGGCAATCGCTCCAGTATTCTTGCCTGGAAAATTCCATGAACAGACAGAGGAGCCTGGCAGGCTACAGTCCATGGACTCGCAAAGAGTCAGATACAAC EMBV3_42725 TCCAGACTTGGGGTGTAGGTCTCACCTCTTCAGGTTCTCATGATACCACCTTTACTGTGC Gene GeneID:281849|IGF2R:NM_174352:8_cdna Constitutive 0 NULL GeneID:281849 9 GENE IGF2R CI-MPR CIMPR insulin-like growth factor 2 receptor EMBV3_07017 TGTGCAAATTGCCAGAAACTGCTGGGGTGCTGCTGGTCGCTGACAAGCCAGATGAATTAA Gene GeneID:280691|H4:NM_173880:9_cdna Constitutive 1 NULL GeneID:280691 23 GENE H4 NULL histone H4 EMBV3_19516 GGTCACACCCATGCTGAACCCATTCATCTACAGTCTGAGGAACAAAGACATAAAGAGGGC Gene GeneID:785865|LOC785865:XM_002688654:36_cdna Constitutive 0 NULL GeneID:785865 7 GENE LOC785865 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_15063 GAGGTCAACAGCTGGTCTCTTTGGTCAGTGTGTTATCGGCAGCTAGTAGTGGTGTCTCTT Gene BVT0102_317974 + 0 NULL GK000008.2:73788021-73798777 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03022 ATAACTGCATTTTTAAAGGAGCATCCAGAACTCATGCTGGTAAATTCCAAATCCTGGGTA Gene BVV0102_046872 + 0 NULL GK000028.2:46054220-46067519 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160875 TCONS_00160877 TCONS_00160874 TCONS_00160876 1 XLOC_097779 Coding TCONS_00160876 XLOC_097779 Coding Coding TFAM 28:46065011-46079446 j TSS120212 3611 1 TCONS_00160876_2 196 0.105787870396012 6 0.750242483026188 3.81234708597943e-12 2.30206737298132e-12 1.69704885334176e-13 4.78894444372855e-12 3.89547839041622e-06 0 1.85440703442473e-11 3.1074017337114e-15 9.28095139417345e-33 0.000491352566937115 1.34716301495844e-07 0.000613336424949591 8.65892351694974e-05 0.000218465002994961 4.70241820386156e-11 0.00236455947569118 0.00563616210492748 0.00858702198232597 1.10138744523229e-05 1.10990250517076e-13 1.11420574590433e-12 0.000544461115987767 0.000736720827902131 7.18237257058551e-05 2.57020118426859e-12 6.18953484520329e-12 1.35718856063342e-08 0.00037567279124418 0.000127482672546158 4.04575589735242e-06 XM_005226558.1 TFAM PREDICTED: Bos taurus transcription factor A, mitochondrial (TFAM), 0.0 5238 100.00 0.803932428690113 NM_003201.2 TFAM Homo sapiens transcription factor A, mitochondrial (TFAM), 0.0 996 75.76 0.391581279423982 TCONS_00160876_2 sp|Q0II87|TFAM_BOVIN TFAM_BOVIN Transcription factor A, mitochondrial; 3e-133 378 79.27 0.994897959183674 2 coding 0 0 0 0 -0.0161175721512546 0.898061366852757 0.0248394234424226 0.616211754440161 GCGGCTCAGCTTCGCCCCCTCGAGGCCAGGTCCCTCCGCAGGCTAGCCGGGTTGCAGTTTCCCTTCTCCGCCTCCGAGCGCCTTTTTCTTCGTAGTCCCGCCCACCAAGGAAGCCAGTACAGCGCCTGCGCCTTCTACCTTGCCCCGCCTCCTAGCTAATCGGAAGTTAGCCGATTTCCCATAGTGCCCCGCGAGTGGCGGGCATGATAGTAAATCCGGTAGGCTCTCTGGCGGGTTTAAGTCGGCTTTGTTGCGGTTTCTCTTGTGCCAGGGCGCTGTAGGGAATTGGGGCCTGGTCAGTGCTTTGTCTGCGGATGCAATGGCGCTTCTCCGGGGCGTATGGGGCGTGCTGAATGCGCTGGGAAAGTCAGGAGCGGATCTCTGCGCGGGCTGTGGCAGTCGACTGCGCTCTCCCTTTAGTTTTGCGTATGTTCCAAAATGGTTTTCATCCAGCTTGAGTGGTTATCCAAAGAAGCCCATGACTTCATACGTTCGATTTTCTAAAGAACAGCTGCCCATATTTAAAGCTCAGAACCCAGATGCAAAAAATTCAGAACTAATTAAAAAAATTGCCAAGCTATGGAGGGAACTTCCTGATTCAGAGAAAAAGGAGTTAACAATGCTTGGAAAACCGAAAAGACCTCGCTCAGCTTATAACATTTTTATAGCTGAACGTTTTCAGGAAGCTAGGGATGGCACATCACAGGTAAAGCTGAAAGCTATAAATGAAAACTGGAAAAATCTCTCTAATTCTCAAAAGCAAGTATATATTCAGCTTGCTAAAGATGATAAAATTCGTTATTATAACGAAATGAAATCTTGGGAGGAACAAATGATGGAAGTTGGACGAGAAGATCTTATACGTCGCTCAATTAAATACCCAGCAAAAAATGACCCTGAGAAGTTTTAAAATAGAAGATTGAGTTATGTTCATAATGGATAGACATAAGAAACCAACTAGGTCTCAATACCGGAAGCTGTTGTAAAATTAGAATGGATAAAGTTGGTGAACATTTATATTTAATTCCTTTTCTGTAGCCCATGGACTTCTGCCAGCCAATTCAATACATTTTGTATTGGTGTCTTGCTTTTGAAAACCCAAACAGATAAGACTTCATGTGGAATTTATTTTGTGTTTAGGAACTACTGAGCATCAAAATAATCCATGAAATGTAGCAGTGAATCATTTTACCTTTGATAAAGGTAAATCAGACTGTGAAGTTTTTTTATACTTGGTGATTATGGAAAAAATATTCTTGTTTCCTTATATTATGGAAGCAGGAGTTTCCTATTCATAAGTATCTCAAAGTTTGTAGAAGCCATAGTGTTCTATGATATAACTGCATTTTTAAAAGAGCATCCAGAACTCATGCTGGTAAATTCCAAATCCTGGGTATAATTCATATTATAATCAGACTTGATGGTTGTACATGTGAGGAATTTCTGGTATCAGTTGCAGCTTTTATAAAAGGTATAGATTTATAAACCTTTTCCTCATTATCTTTTTCCTAAATTAAAAACTAAAAAATTATGTACCAAATCTATGCATATTGTTTTATATTGCATAGAATAAAAATTATGTGTTTCCTAATTATGTTTTAAGGTGAAACATTCATTTTATAGCTTTCTGGGATTTTTGTTTGTTTTTTTAAACAAAGTAGGAGTTTGTATACTGAATTATTTTTTCTCTTATGTAAATATATTTATCCAGAAAGTAGAGAACTTATTTGGTGTAAGTTTTAAAATGAGAGATCTAAAAAAATCATGTCTCCAAAGTCTCTCAAATTGGAACCTATAATTTTTAAACATTTGCATAACATATAAAAGCCTGTATAATAATTAATAGCCAGTTCTAGCCTGATGCCCACATCCAGCCCACTGCCTGCTTTTCTTGGCCTTGTCAACTAAGAATTGTTCACAGTTTTAAATAGTTAAAAAAAACTAAGCATACTTCAAGACACATGAAAATTAATATGAAATTCAGTGTCCATAAAAAAATGTTTTATTGGAACACAGCCACACTCATCGATTATGGCTGTTTTTGTACAATAGTGCAGTTGACTTGGTTGCTACAGAGAGGTGCAGCCTGCAAAGACTGACCCGTATAGTGTGGAATGAGATGCTCTTAAGTTACTTGCTGTGGCTCAGTAAAATACATCTTAACAGTTTTCCAGTTAGCATTTAAACCTTACCCCTTCTAGCATTTGATTATCTTCTTAACAAGAGTCAAAGGTTTTTCAAAATCCACACCACCTTTTTGAGCAAAATATTCAACTGTCATCATCAGTTCACATGAATTTATAACTCAAAATTTATATATTTACTTTGTATTTTGCAAAAATATGCAAAAAAAAATAAAAGTGTATATTCTACATCTCCAGAAAGAAGATTTTTGAAGTTTGTGGATAGAAAATAAGTAAAAGAATCACTAAAAAATGACTTGTTACGTACTGAACTTGGCAAAGGTCAGGACTGTAGGGAAAACTACAACTTAAGAGGACTAGCCTAAGATTTAAATATATGGAGCTGTTTGAAGTTTTCAGGCGGCTTTGCTCTCTGAATGGTAATGCAGGACACAGCCTGCCAGTATGTAAATGACCCTTGGTCTGAGGCTAGAGTGTTCTGGGGAAGAAGAGAGGGAAGAAAAGGACACGTGCTAGTGTCTCTCCCAAGCTTTCTCAGTTAGGTTTCCAGGAGAGAATTAAGCCCTAATTCCCTGGGGCATCTAGAATGGTACCAATTTTGTACCAGCCTTAGGAGAATGGAGAAAATAATCACTCAAATAATTTACTGTGTTCTGTGCTTCAGATGAGCCCAGGGAGCACATGGGAGTCGATGTTTATAATATTATAGAATGGGTGAGGAAGAGAAATGAATTATAAACTCCTGTAGCACAAATGTATAAAACACATCTGCGTACTTACCTTCTGAGCTCTAGGCATTTAGCTGCCTGTACTGTTTTACACCGAACACATTCAAATATCCAGTGTCTACGTTCTCATGTATATACTTAATATAGGGAGGACAGGTATGAAACAGTGAAAGGAGCTGTAGCAAAACCGTTTTGTTTCTAAAAGGGTGTCATTGTTAATACTTTAAATATTAGGATAATCTGATTTCACACCTTTCTTAATAAACTTCAGTACATGGCATACCATGTATTAAATGCCATCCATTTGTATATACAAATACTCTGTTATGAAGAATGAGAGCGTATATCAATAACCAGTGGCTAGGTGTGTAACCGGTGGCCATTCTTATATTGGCTGAACAAGAAACTAAAAGCTAAAGAATTGTGACCAGGGAAAAGATGCTTAAGTGAAAACAGCGTTTATGCTGTCTGAGCAGTCAGTCACAGAGACGCTTATGTTCACTAGAGTACCAGTATTAGATTTTATAAAACAATTGACAAGGGTGTGTGTAATTATTTTCTGATGTTTAAGGTATATGTGCAGATTCAGCCTACTGTAATAATGTAATTTTGCCATTGCTTTTGGCTAACTCCTTTTTTGGAAATGTCCTTTTTTTTTTTTTAATGTATATGCTTTTTTAAATAGTTGGCCATGAATGTGTATATTTACATTTCTGAATTAAAATGCAGTTAAAGTAAC EMBV3_12842 TGTGGATTTGGGCACTGCTCATTCAGCTGCTGTAACTGCCTCTGGTGACTGCTACACTTT Gene GeneID:532332|NEK8:XM_002695701:291_cdna Constitutive 0 NULL GeneID:532332 19 GENE NEK8 NULL NIMA (never in mitosis gene a)- related kinase 8 EMBV3_36823 CAGCCACACTTGTCCCCAGAGGCACATTCGTGCACATGCTCACAGGCCCTCTAATTGTAT Gene GeneID:786096|PALM:XM_002689163:190_cdna Constitutive 1 NULL GeneID:786096 7 GENE PALM NULL paralemmin EMBV3_34019 ACACAGGTGAGAAGCCTTATGTGTGCTCTGAGTGTGGGCGTGGCTTTGGTCAGAAGGTTA Gene GeneID:531355|ZNF169:XM_002689853:50_cdna Constitutive 0 NULL GeneID:531355 8 GENE ZNF169 NULL zinc finger protein 169 EMBV3_04148 CACCAGAGCATGCCCCTTCCCGGAGCTTCTATTAATATACTCTGAACATCGTGTCAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20498 GCCAGGTTAACTTGGCCCCAGTACTCAGGATCATGAGTTACATAACTTAGATGTCCTTGA Gene BVT0102_200717 + 0 NULL GK000018.2:15405216-15431045 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085593 TCONS_00085594 1 XLOC_051910 Coding TCONS_00085593 XLOC_051910 Coding Coding DNAJA2 18:15429787-15442167 j TSS63871 2902 1 TCONS_00085593_4 329 9 0.766297762339446 0.000244836277484542 0.000156883160038182 0.000299213493112167 2.71211697199992e-09 0.000577873515984059 0.000694668224269561 0.00154641353420232 0.00169244925668355 0.00320519684574231 0.000401617202790296 2.16795812990779e-05 4.24202058034763e-05 0.000343739156839542 0.00154639993272362 0.000425541286325505 0.00138218168463093 0.00281222368528648 0.000642331857397345 0.0013249500065777 0.000598861418248795 0.000309108389436672 0.000631410575560803 0.00296808999614029 0.00185205886530625 0.000122786994698468 0.000176333667108075 0.000211971551430606 0.000384497721961842 0.000287388771120151 0.000289418397309079 XM_005218461.1 DNAJA2 PREDICTED: Bos taurus DnaJ (Hsp40) homolog, subfamily A, member 2 (DNAJA2), transcript variant X1, mRNA. 0.0 2884 100.00 0.55065472088215 NM_005880.3 DNAJA2 Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 2 (DNAJA2), 0.0 2648 90.92 0.650241212956582 TCONS_00085593_4 sp|Q2HJ94|DNJA2_BOVIN DNJA2_BOVIN DnaJ homolog subfamily A member 2; 0.0 680 100.00 0.996960486322188 2 coding 0 0 0 0 0.476691737408576 0.311216434763787 -0.0531627374477588 0.407756557851242 CTGCCTGCCTGGCCTTGCTCATGCGGAGGTCACCACCCTGGAAAAACAGGCATACAGAAAGTTAGCCAAAGAATACCATCCTGATAAGAATCCAAATGCTGGTGACAAATTCAAAGAAATAAGCTTTGCATATGAAGTACTATCAAATCCTGAGAAGCGCGAACTATATGACAGATATGGAGAACAAGGTCTTCGGGAAGGTAGCGGTGGAGGTGGTGGCATGGATGATATTTTCTCTCACATCTTTGGTGGAGGATTATTTAGCTTTATGGGTAATCAGAGCAGAAGTCGAAATGGCAGAAGAAGAGGAGAAGACATGATGCATCCACTCAAAGTATCTTTAGAAGACCTGTATAATGGCAAGACAACCAAACTACAGCTTAGCAAGAATGTACTCTGTAGTGCATGCAGTGGCCAAGGTGGGAAGTCTGGAGCTGTTCAGAAGTGTAGTGCTTGTCGGGGTCGAGGTGTCCGCATCATGATCAGACAGCTGGCTCCAGGGATGGTGCAGCAGATGCAGTCTGTGTGTTCTGACTGTAATGGAGAAGGAGAGGTAATTAATGAAAAGGACCGCTGTAAAAAATGTGAAGGGAAGAAAGTGATTAAAGAAGTCAAGATTCTTGAAGTCCACGTAGACAAAGGCATGAAACATGGACAGAGAATTACATTTACTGGGGAAGCAGACCAGGCCCCAGGAGTGGAACCAGGAGACATTGTTCTTTTGCTACAAGAAAAAGAGCATGAGGTGTTCCAGAGAGACGGGAATGATTTGCACATGACATATAAGATAGGACTTGTTGAAGCTCTTTGTGGGTTTCAGTTCACATTTAAGCACCTTGATGGACGTCAGATTGTGGTGAAATACCCCCCTGGCAAAGTAATTGAACCAGGATGTGTTCGTGTAGTTCGAGGTGAAGGAATGCCACAATATCGTAATCCCTTTGAAAAAGGTGATCTTTACATAAAGTTTGATGTGCAGTTTCCTGAAAACAACTGGATCAACCCAGATAAACTTTCTGAATTAGAAGATCTTCTGCCATCTAGACCAGAAGTTCCAAATATTATTGGAGACACTGAGGAGGTAGAGCTTCAAGAATTTGATAGCACACGGGGCTCAGGAGGCGGCCAGAGGCGTGAAGCCTATAATGATAGCTCTGATGAAGAAAGCAGTAGCCATCATGGACCAGGAGTGCAATGCGCCCATCAGTAAACTCTGCAGACAACTTGCACAGGGGGATTTTCTCTCCACATTGGCCTGGTTTGTTTGCCGCAATCCAGCTGGAGGGTCTGGTCAACCCAGATGAACTGATGGACATCTGTTGGTCTATGTGTAACTTTTAAAATTGATATAGTATCTACAGAGTGTATAATTTAAACTAACCACAAAGCTTTACATCTTCATTTCGACTGTTCTATAGCAGAATAAAGCACTTGAAAGGAAACAAGACTCCCTTTCACACATGGGTTATAAGTTTCAGTCCTGATATTTGTGCTTGATTTTTATCAGTTTTGTGTAGATTTTATGTTTCATATTTTAAATTCAATTCCCACATTGTAAAGTTTGTGTACAGTTTGTCCTGAAGCTTTGTGTTTGGCTGCACCTGCATAAGCTGCTACAAATAGAATAAAGAATCTCATAGCCTGTGTCTATCATTTAGATGCATGGGAAAATGGGCTTTGCACACAATGGGTTTGGAGCTGACTGGGAACAATGGAAAAAATATCATTAGCTGAGCTGTGTTTGTAAAGTTTTGGGTGGGGTCGGGGTGTTTCTTTTTCTTTCTTTCTTTCTCCCCCGCCCCCACCTGTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTACCATCTTGTGAAAGGTTTCTGGAACTGAATAATAAAAAGCAGTTGGTGTAAATTACTCTTTGTCTCAACATTTTTAGAAAGAAGAACATATTTTGAACTGTAAAATCTTTCCTTAAGGACATAATTTGAACTGTAAAATCTATCCTTAAACTGGAGAATGTATCCTAGTTTTGGTTCTTAAACAGTATTTAAAAACCCATTGGCCTGAAGCTTATGCCTCAGGCTCATGCCCATTTTATAGTTTCAAAAGACAAGAGAAAGTTTGATATATTGGTAGAAACGGGCTTTATTGGCTTCAATTAATGCTTTGTAGAGTCAAGGACATCTAAGTTATGTAACTCATGATCCTGAGTACTGGGGCCAAGTTAACCTGGCCTCTGTATTTCCGCACCCAACTCTGTTTAAAAAAATAAGGTAACAGCAAATCAGTATTAGAACCATGTCTGCATAGAACCTGTTAAGATGCTCTGTTTTCATTAAATGTTAAGTTAAAGATTCTCTTGTCTCCATTAAGTTGAATATTTGAGACTGGGGGAAGCATTGATTACTATTCTTTTACAGAAAGGTAAGACTCTTAGGCTGGTATGAGAAAAATCAGGTAAAACTACTATGAAAAGGATGTACTGCTTTTTCATTTTCTATTATCTTCTTTTCATTTCCAGAGTAGATATTTTTAGAACACACTTAGGGAAAAAATAGATGAGTTGTAGATACGTTTGTAAAAGACAAATGGGAGAAAACTGAAAATTAAAAATTTTAAATATGCCATCCCTGAGCCTATTTGTAGTACTTGTAGTCTATTTCTAGGTCTTCTAGAACCTGAAGAAAGAAAAAGGTCCTGACATTAATCAAGGCTGTGAGGTTTAAATTATTGCCCTATCCACTCTACCTCCATTGTACAAAAACTTTCACAACCAGCCTGGGCAAGATGCAACAGCGTAGTAGTTTTGTATCCAAGGTTACTTCCCCCACAACACTTTAAGCAAAAGAAATGCAGTGGCAATACAAAGTCTGTAGCCTTTCCAATAAAGGTTTGTAAAACAGTTGTACAGTGTAG EMBV3_20505 TCTCTCCAGTTAAACTGGACAAACAGCAGTGCAGGGCCCTCCCGAGGCCATGTGTCCACA Gene GeneID:616554|TMEM18:NM_001034793:3_cdna Constitutive 0 NULL GeneID:616554 Un GENE TMEM18 MGC128536 transmembrane protein 18 EMBV3_31044 TCCCTACTGGATTCAGAACAAGCCTCTCACAAGTACCAATCCGGAGGAATGACAACCACC Gene BVT0102_396221 + 1 EMBV3_04516 GK000029.2:5474133-5494431 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166059 1 XLOC_100897 Coding TCONS_00166059 XLOC_100897 Coding Coding - 29:5308619-5309627 - TSS124037 1008 2 TCONS_00166059_2 41 0.154761904761905 1 0 0 0 0 0 0 0 2.65165331333197e-05 0.000179944435155375 0.000139870213576539 3.69698347282516e-05 0 8.86826635415973e-06 1.03824604606499e-05 9.33332012506688e-06 3.65044387874625e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NM_001034503.2 NXPE4 Bos taurus neurexophilin and PC-esterase domain family, member 4 (NXPE4), mRNA. 8e-47 192 88.74 0.14781746031746 TCONS_00166059_2 sp|Q5VXH5|PRAM7_HUMAN PRAM7_HUMAN PRAME family member 7; 1e-08 50.4 63.41 0.975609756097561 0 noncoding GCCTGTCAGGCTCCTCTGTCCATGGGATTGTCCAGACAAGAATGCTAGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCATCCTGACCCAAGAATTGAACCGGGGCCTCCTGCATTGCAGGCAGATGATTTACCAACTGAGCTATGAGGGAAGCCTTCTCTTCTCTTACTAGTGGTTAGCTAATCTTGAAGGGTGCCATGTATCCCTAGTGAAGGGAGAGTTGTTAAAAAACATCAGTTCTTTCCAATGAACACGTTTCAGGTTTAATTTTGCCTCTCAGTGTAGTTTTGCCTGAACTCAAACATTTTAATTAGTGCTTTAACTTCAATCATTTAAAAATATCTTTTAAAGACATGTAACATGTGTATTTAAAATATCTCTTTGGAGTTTTGTTTCATGAGTTTCACCTACACAGTTCTGACACACATGGCATTCGTGTTAGGGGTAACTGAGGATGGAGGCTGCGTTGGTCCACATGACCTTCCTCGTACTGATTTAGGGCTCTAAATGACGCTCTGACGTCATTCCCTCATAAAGACTGGAGTGGGTTTTCAGAATTCCTGCTACCCACTTCCAGGTGGGACTTGGATTAATCCAAGCACCGTATGAACTGAATGGGCTGGTGGTTGCCCTTCCTCCGGATTGGTACTTGTGAGAGGCTTGTTCTGAATCCAGTAGGGAAAGAGCTATATCATTGTGCCCTTGAGGCCTGAATGGCATGTGGCCTAACAGGCACGTCCACCCCTGCCAGAGCAGTGCCTTAGTCCTGAGTAGATTCCTCTGAAGGGTTGGGAGATTGTCTTAGGTCTGCTCCTGCTTGGCCTGACATGGATGATATGCTCACTGGCATTTTCCACAGGATTCCTCCTGAAGCAGAGTCAGGATGAGTGTCCGGCACCCCCGTAGGCTCCTGGACCTGGAGAGAATGCACCTGCTCAGGGAAGATGCCTTGGTCTATTCTTATCTGGAGTTTCTGCCCAGGGAGCTCTTCCCACCCCTCTTCATGGA TCONS_00162933 . 3' 4319 TCONS_00162933 . 3' 5326 EMBV3_25164 ATACGTTTCTGGAACATTACGATTTGGAATGTGGTGTTGGAAAAAATGGATCAACGATAG Variant GeneID:504650|CEPT1:XM_002686145:258_cdna 783^967 4 EMBV3_36603 GeneID:504650 3 GENE CEPT1 NULL choline/ethanolamine phosphotransferase 1 EMBV3_33731 AACGAGGAAGACATTGGTGCAGGAGACCAGGTGACTGTGCAGTATATGCAGGATCGAGGT Variant GeneID:527403|MAT2A:NM_001101131:98_cdna 511^654 4 EMBV3_19584 GeneID:527403 11 GENE MAT2A NULL methionine adenosyltransferase II, alpha EMBV3_30327 GAGAGGCTGGGGAGGACTGGGGCTTTGGATTAGCAGAGGCGAAAGATTATAGAGGGATAA Gene BVT0102_009599 + 0 NULL GK000018.2:63639811-63645888 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087619 1 XLOC_052549 Coding TCONS_00087619 XLOC_052549 Coding Coding NLRP13 18:63599498-63642109 j TSS65043 7043 1 TCONS_00087619_8 1174 0.194235411046429 18 0.835132597981694 0.000564379093413557 0.000824817369043994 0.000593983795627977 0.000374853781144045 0.000143580609019243 0.000235025593790803 0.000406672184287845 0.000308717896485569 0.000252579111705135 3.3665130692819e-06 3.70834842822732e-07 4.59728351388564e-10 1.20340016541827e-05 6.34667423927233e-244 1.36506992721201e-05 3.61269100125151e-05 4.51299782320337e-07 0 0.000463540766186769 0.000304864532004212 9.03358048998715e-05 4.6953577824235e-43 3.97142773372326e-139 4.11323751651935e-58 0.000253266464768554 0.000684421711516582 0.000352759425378006 0 1.90421788067067e-73 3.18387225173529e-05 XM_002695466.2 NLRP13 PREDICTED: Bos taurus NLR family, pyrin domain containing 13 (NLRP13), mRNA. 0.0 4518 99.96 0.355956268635525 NM_176810.2 NLRP13 Homo sapiens NLR family, pyrin domain containing 13 (NLRP13), mRNA. 1e-54 221 73.83 0.0511145818543234 TCONS_00087619_8 sp|Q86W25|NAL13_HUMAN NAL13_HUMAN NACHT, LRR and PYD domains-containing protein 13; 0.0 727 46.23 0.752129471890971 3 coding 0 0 0 0 0.137151548933702 0.481053888759753 -0.0230850378129895 0.79399876760947 GGGGTGCCATTGCCTTCTCCTAGTCTGTTTCTCAAGTCTACTGTAAATGTGCTATCCTACTTGCATACTTTAAAAGATTTTTTTAAAAAGTGGGGGAAAGGTGGATGGTGGGGCAGACCAAGTGCATTTTCCTTCTGCTTTGGGAGATGTTTATGACAGGAAGGAGTCAAGAAGCCTACTTCCCTCCAGGGGTGAGTTAAATGAGTTATAATTGTTCATTAAAATCACTAATTTAATTGGTAATACAATAGTAAATAGTGGTGGTATAAAGACTAAGCTGCCTTGATCCTGACTTCAGTGGAAAAGCCTCTGTGTATCTGATGGAATGGGTCCACGGGTGGTTTTCCTTGCATTGGGAGAAGAAATGGTTCCAGATGTGGTTGTGATTTTCAGACCTCATGGACTCTTTTTTTTTTTTTTTTATTGAAGCATAGTTGATATACAATGCTGAGTTCATTTCTCTTGTACAGCAAAGTGATTCAGTTACACGCAGACACATACATCCTTTTAAATAGTCTTTTCCATGATGGGTTATCCTGGGAAGTTGAATACAGTCCCCTGAGCTCTGCAGTACGACCTTATCCCTCTATAATCTTTCGCCTCTGCTAATCCAAAGCCCCAGTCCTCCCCAGCCTCTCCCTTGGCAACCACCAGTCTGTTCCCTATGTCGGAGTCTCACAGACTCTTCATTCGTCTCCTCTTTCATCATCCTATTAAGATCTCTGCACACCCCACCCTGCCCTGAAGATGGTTGTTGTTGTTTTTCAGCTGCTAAGTTGTGTCCGACTTTGCGACCCCATGGACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTTACTCAAACTCATGTCCATCCAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAGTCTTTCCCAGCATCAGGCTCTTTTCCAATGAGTCAGTTCTTCTCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGAGTGATTTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGCTCAAAAGCATCAATTCTTCGGCGCTCAGCCTTCTTTATGGCCCCACTCTAGGACAGGTATTCACACCACTGGCCTCCTGCTGATGTGGGAGATTTCATTTACATCAGCTGGGTTTTAATTAGAACCTCCAACTCTGCATCCCTCTCTTAGCCGGGACAACTTACACCTGGAAGAAAAGGACTCCAGGATCACCTATGGCAGGTGGCTTCTCCACCCTCCGGAGACGCGGCTGCGACGGAGGGGGCGGGACACCCGTAGACAGACCTGATAGGAGCTGGAGGGGCCCCGGGGCCAATCACAGGCTGGGGAGGGGTGGGGCAGACTGCTTCGGGTCCGGAGTCTGCGTTCTAGAAACTCGCAAGAGCTGAGAAGACAGCTTGGAGCTGTTCCTATTGCGGCTGGAGACCTCGCTCCCGGGCCGATGGCTTCCCCTGCCGGCATTTCTTGGCATGATGGTGCCCGTGACCAGCTGCTGTCCCACCTGAGGGGCTTGGATCCCTGGCAGCTGGAGGACTTCAAACTAGCCCTGCAGTGCCCGGAGCTGCTGCCGGAGGGCGCCCGCAGGATCCCCTGGGCAGACCTGAGAGCCGCGGGCCCCGCCGACCTGCTCTGCCTGCTGGAGGAGCGCTTCCCCGGGAGGCGGACGTGGGAGGCGGCCCTCCGCGTCTTTGAGGACCTGCGGCTGAGCTCGCTGTGCGAGCGGATGCGAGCAGAGCTAAAAAAAAATCTTGGAAGCCAAAATACACAGGACACTTATTTGACAGAAATAGTGGATGCAATGATTTCCATTCCCACGCACGGTGAAGGAGGGTGCCCTTCTTTCCACACCCTCTCCAGCACTTATGGCTGTCGAATATTTGAGATGTCCATTCGGTCCAGTGGAATGGCCACAAGGCGGCAGCATTTCTTCCTGCCCAACTCCGGTTACCTGGGCAACCAGAGCCTCAGGGCGAGTCCTGTTCCTGGAGGTTGCTTCTGCATCTTGGCTGTTGGACCTGGTGCCGCCGTGATCGTTGTGCTTAGGGAGCTGGTGATGGACGTGCTGAATCAGTACATTGTAGAACCCGGTAGACGGCCCACCCAGGTCACCAGGCGCCAAGATGTGAGCGGAGACTCCGAGGGGATGGAGAGAGCCAAGCGGAAATGGGAAATGTCACAGGTGTGCAGACTCCAAGATCCAAACCAGGAAGAACCAGAGACGCTGGAAGAGACAGCCCACAGAAGAAGATACAGGGAGAGGCTGAGGACCCGGATCCTGGCCCTGTGGGACCGCACGCCCTGGCCCGAGGACCACATCTACCTGCGGCACGTGACGCAGCGGGAGCACGCGGAGCTGCGGGGCCTCCTGCGCCCGCGGGGGGCCGGGGCGCCGCCCCTCACCATGCTGCTGGAGGGCGCGGCCGGCGTGGGCAAGACCACCCTGGCCACCAAGCTGGTGCTGCACTGGGCGGAGGGCGTCCTCTTCCGGGGCCGCTTCTCCTACGTTTTCTACATCAGTGGCCACTGGCTGGCCAAGCTCGGTGACATCAGCTTCGCTGGTCTGCTGGCCCTGGACTGGCCGGACTCGCAGGTCCCCGTGGAAGAGTTCAGGGCGCACCCCGAGCGGCTGCTGTTCGTCATCGACGGCGCGGAAGAGGTGACCCTGGGCTCCAAGGGCTCGGCCAGCCGGCCCGGCGCCGACTGGTACCAGGAGCTCCCGGCGGCCAGCATCCTAGTCCGCCTGCTGAAGAAGGAGCTGGTCCCCGAGGCGACCTTGCTTGTCACCGCTGGGCCCCCCGGAGGCCACGCCCTCCGCGGGCTGCTGCTCAGGCCGTGCCGCGTGGGCATCCCGGGCTTCACCGAAGGGGACCGCCGGGAGTATCTCAGGAGGTTCCTGGGGGACCCGGACGTGGCCGAGGAGGCCTGGCGCCGGATGCAGGGGTCAGAGACCCTGGTCCGCTTGTGCGCCGCGCCGCTGGCGTGTTGGGCCGTGTGCGCCGGCCTCAAGCGGCAGCTGGCCGGCAGCCCGGCACCGGCGCCGGGCGCGCCCACCCCCACCGGCCTCTACGCCCAACTCTTCTGCAGCCTCCTCGCGGGGGCGGAGCCGGGTCTGCGGACCGGCAGCTCGGCCGGACAGTGGAGGGCCTTCTGCTCGCTGGCCGCCGAGGGGCTGTGGCTGGCCGCCTTCACCTTTGCAGGAGACGCCCTGGAGCGCTGGCGCCTGGAAGCCCCTTTCATCGACGGTCTGCTGAGGCTGCAGATTCTTCGAAGGGTCAGCGACTGTGAGCACTGCGTGACGTTTGCTCACCGGAGCTTCCAGGAGTTCTTCGGGGCCTTGTTCTACGTGCTCTGGGGGGCCCAAGGCTCGCTGGGCGGGGTCCCCCGGCATCAGGAGATGAGGCGGTGGCTGAACCACGCCTTTGCCGACGCCAACCCCTACTGGCGTCAGATGGTGCGCTTTTTCTTCGGTCTCTTAGGAACAGACCTGGCCAGGCAACTGGAAGAGGCCGTGGGTTGCCGGATGTCCCCCGGGGTGGCCGACGAGGTGTTGGACTGGGCGGAGGAGCTGGAGAGGTGCGGCGCCGTCTCGGGGCGCTTTGACTTCCTGTGGCTCTTCCAGTGCCTGCACGAGACCCAGGACGAAAACTTGGCCCGGCGGGTTTTGAATCGCCTCCCAGTGGCCGATCTGGACATTCAGGGCTGCGAACACCTCCGGGTCTCTTCCTTTTGCCTCAAGCACTGTCAGAAGTTACGAAAGCTGAGGCTCTCTGTCAGCCACCGTGTCCTGGAAAAGAAACGGACTTCCGGCCTGGGAACTCCGGAGATGAGGGTTGCCGATTTCCGGATGCATCAGTGGGAGGATATTTGCTCGGTGTTTTGCAGCGGGAACCTGAGCCAGCTGGACCTGAGTAACAGCAAACTTAGCACTGCCTCCATGATGAGACTCTGTCTCAAGCTGGGAAACCCACAGTGCAGACTTCAGAAACTGGCCTGGAAGTCCATGGCCCCTGTGGAGGGTCTGAGGAAGCTTGGTCTTCTGCTTCGTGGTGACCGGCACCTGACCCACCTGGACCTGAGCTCCAACAGCCTGGATGCCGCTGTGTCCAGGGGCGTGTTCAGAATGCTGGGGCACTCAGCCTGTGGCCTCAAGTATCTGTGGTTGGAGTCCTGTGGCCTGAGCACTGAGGTTTGCCATCAGCTCTTCACCGAACTCGGCAGGAACTCGAGTCTGAGCTTCCTCAGCCTGGCGGACAACGACCTCTCCCACGTTGAGCTGGAGAGACTGCGGGAGACCCCGGGGACGGCCACCTGTGCCCTGAAGGAGCTGTCGCTGGAGAAGGGGAACCTGTCAGCGGCCGCCTGTGAGGACTTGGCCTCACTTCTCACCAGCACCCCCCGCCTGACTCGACTGTGCCTGGGACTGAACCCGCTCGGAGATGAGGGCGTGCAGCTGCTGTGTGGCTCCCTGACTCGGCCTGAGTGTGTCCTGCAGAGACTGGAGCTCTGGTGCTGCCGGCTCAGCACGCCCAGCTGCAGGCACCTGTCGGACGCCCTCCTCCGGAGCCGGAGCCTGACGCATCTGAACCTGAGGAGGAACAGCCTAGGAGACGGGGGAGTGAAGCTTCTGAGCTCAGCCCTGGGCCGTGCGGACTGCGCCCTGCAGAGCCTGAAGTTGGAGAAATGCAGTTTGACGGCCGCTTGCTGCCGGCCGCTGTCCTCTGTTCTCGGAAGCAGTAAAAGCCTGGAGAACCTGAACCTTTTAGGAAACAACCTGGGGCCAGACGGAGTCAGCAGGCTGTGGATGCCCTTGAGAAAGCTGACGTGCAAGCTGCGGAAACTCGGGCTCGAAAAAGACCTGTGCTCTGTAGTGAGTGCCGAGTTGGAGAAACTACATGAGAAGGGGTGCTTTTTGAGAGTCAAGTCTCAGTGGGACTTTAATGACCCTGAAGAGAGATGGTGGTGGTGACCCATGGAGGCGACACCACAGGTTTACCACGGCCCGTCCTGGGAGAAAAGCCTCCCTGACGCACCGTGTGTTGCTCAGGAATTTCCGTTCATGGGGACGAATGAGCCGTCGCCTCCAGGATGCCCCTTCAGTCTGTGACAGGCAGCACGTTAAATGCCCAGTCTGCAGAATACTAACCCAAGTCTCTATTTGGCCCAAGATCCTACATGGGCTCACCTGTATGTGGGATGCCTTAGCTCCAGGACCAGGGATGGATCCCGTACCCCCTGCATTGGAAGGCGAAGTCTTAACCACTGGACTGCCAGGCAAATCCCAAAAGAAAGATTTTAAGGAACAATCTAACAATCCAGGAACTAAAAGAAAAAAATACTAAGCCCAATGCTCACCAGAAGGAAAGAATTAACAGAAATCAGAGCAGAAGTAAATGAAATACAGACCAGACAAATAAAAGATCAGCAAAGACGAGAGTTGGTTTTTTGAGAAGATAAACTCTCCGCCCGGTAGGAATGTGAGGGATGGTTATAACATTCAAGGTCAGGCACCTAAGGCATTTCCCATCTTACTAGCGTTTCTTGTCCTAAGTCCAGCTGAATTTACTTCCCTTAAAAAAAAAAAAAAAAAGAAACACATTTTCCTTTTATCACAACAATTCACATCCTTCCTTTTTCCTGGAATTCCCTTCTTCCCACTCCTTCAACTGTCTTGCTCCTTCAGACTCCAGCCCACTTGATTTGACTTGCTCACAGTTGCCTGATGATAATCCTCAGTGACCATTTCTGATTCTCTATCTCAGTCTCAAGATGGGATGGGGAGGGAGGTGGGACAGGGGCTCAGGATGGGGGACGCATGTACACCCATGGCTGATTCATGTCAATGTATGGCAAAAACTACTACAATGTTGTAATTAGCCTCCAATTAAAAAAATAATAATATAAGAAAACTTGAAAGAGAAGTTAAGATACTAGAAGAAGCAAAAGTGGCTAAGATCACTACATAAACACAGATGTTACCTTGGGAAAGAAGCTGAAATTCTTGCTCTGTTGGAAAGAAGATGAACTTTCTTTAACATCCCACTGTTCCTATACCCACCTCCCACTGATGCTGCTGCTGAAATGCAAGTCAGTCTATGAGGAGGAAGTGATTTTCCTGTTGCACATTGACACCAGAGAATTTGAATAATAAAATGTCATTTACCCAAAAAAAAAAAACCCACAAAAACTAAATCTATGCTTTTTCTTTTTTTGCTTTTGTTTTTACTCCACCTCTCTCTTTGGGCTTCCCTGGTGGCTCAGATGGTAAAGAATCTGCCTGCAATGCAGGAGACTCATGTTCAGTCCCTGGGTCGGGAAGATCCCCTGGAGAAGGGAATAGCAACTCACTCTTCCTGCCTGGAGAATCCCATGGACAGAGAAGCCTGGCGAGCTACAGTCCATGGGGTTACAAAGAGTTGACTGAGACTGAGCAACCAACACTTTCTCTTCCAATACACTGAGAGTCGTTTGAGGACAAGCACAGCTCACCCTGTTGACTGATAGATTGTCTACCCACAGTGTCTGGACAGTCAACATCCTGTGAGCATCAGCTACTGCTATTCCACAGAGTCTCCAACAACAGAGGGAGGAAACACAAGACTTATGCATTCTTATCTCTGCTTTGAATTACAATTACCTGCAACTTCCATGGCATTCCTAGAAAGCTACATTTCGCCGTGGCCCCAGTCATAACACAGAAGAACAAACCTAACCTCGTATTGGATCTCTTCCGTTAGCTGTGACCTCTGCGCCCTGTTGCCTGTGCTCAGCTGCGCTGGTTTGAGAAACAATGCTGCCTGCATGTGTGCCAAGTGTCTTCAGTCGTGTCCAACTGTTTGCGACCCTGGGTGTGGATGCTCAGAGTGAGGCAGGATCAGCCTGCATCCTGCATAGTCTCAGCTCCAAACTCCTCTCCTGCTGCAGAGCCTGCTCTCCTGTTTCCTGCCCTGAG EMBV3_20033 GGCTTCTTGCTGTCCTTCCTGTTGACCCCCGCTATCAGCTGTCGGTTTTGTCAATGAAGT Gene GeneID:504489|LONRF1:XM_002698692:50_cdna Constitutive 0 NULL GeneID:504489 27 GENE LONRF1 NULL LON peptidase N-terminal domain and ring finger 1 EMBV3_33366 AACGGCTTCCACGACGCGTTCATCGAGGAGGATAAGATCTGTGACCAGATCAGTGATGCT Variant GeneID:527403|MAT2A:NM_001101131:98_cdna 151^195 4 EMBV3_24614 GeneID:527403 11 GENE MAT2A NULL methionine adenosyltransferase II, alpha EMBV3_30867 CTCATCTGTAGGAGCACTTGCAGTCCTGTGGGACCCATGAACGGACGTCTTGCTGACCAT Gene BVV0102_075207 + 0 NULL GK000014.2:26358693-26428475 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18591 TAACAGCGGCGGAGCGGGAGGCTGAGCTACACTACTGCTAATACTGTCTCCCTTCTTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12431 CAGTAACAGCCAGGTTGACTTCCTTTATGGCTCAGACTGTAAAGTGTCTGCCTGCAATGC Gene BVT0102_017989 - 1 EMBV3_22641 GK000007.2:39812777-39834180 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15015 ACTCAGAGAAGGGGGCCTGGGTGGGGAACACCTCTTTCCATTCCTGAGCCTTCAGACTCT Gene GeneID:540410|GPR162:NM_001076217:61_cdna Constitutive 0 NULL GeneID:540410 5 GENE GPR162 MGC139453 G protein-coupled receptor 162 EMBV3_24126 ACTGGAATCAGAGACAGCCAAGGAATTGGCGATGACAGCCCAGAGTCACCAGGGTGGTAA Gene GeneID:531723|FIBCD1:XM_002707691:236_cdna Constitutive 0 NULL GeneID:531723 11 GENE FIBCD1 NULL fibrinogen C domain containing 1 EMBV3_33162 ACAATTATACTGCCATCCCATGAAACCTCCGACCTTCTTCGTGGCACAGGAAGGATTAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23334 GCTGCCTCGGAAACACAGAGGGGTCTTCTCTCGCCCTGCATATAATTAGCCTGCACACAA Gene GeneID:538452|LRRTM1:NM_001080304:128_cdna Constitutive 0 NULL GeneID:538452 11 GENE LRRTM1 MGC139690 leucine rich repeat transmembrane neuronal 1 EMBV3_06686 GCTAAGGCCTTACTGGAGAACGGTGCCCACGTAATAGAGAGTGCATGGAGATTCTACTGG Variant GeneID:511852|ASB11:NM_001034413:20_cdna 387^537 1 EMBV3_39075 GeneID:511852 X GENE ASB11 MGC128419 ankyrin repeat and SOCS box-containing 11 EMBV3_20675 GGATGTTGTGACTCAGAGGATACAGTAGAATGATGGCCTCACCTGCCCACAGTTTCAAAT Gene BVT0102_033521 - 1 EMBV3_16049 GK000004.2:38856749-39116166 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181358 TCONS_00181360 TCONS_00181366 TCONS_00181362 TCONS_00181368 TCONS_00181359 TCONS_00181367 1 XLOC_110584 Coding TCONS_00181362 XLOC_110584 Coding Coding CACNA2D1 4:38338929-38860701 j TSS135756 7326 1 TCONS_00181362_6 646 38 0.986032186533939 4.20240639242468e-76 2.20275546512276e-155 5.97693119910714e-08 1.23520150467437e-08 8.48500746809174e-06 2.37790456773296e-107 1.03060627122273e-38 1.34738359407048e-06 2.77637595495998e-05 2.57116251744325e-08 3.74653124791601e-66 8.60663687871085e-126 5.98452240419435e-77 1.56456255320115e-68 3.18488143441554e-09 0.000785308685221325 0.000275838989799275 0.000379164286232789 6.87159691924947e-07 1.04755112134771e-05 3.01486575696962e-12 9.87115406794408e-05 6.07849770950032e-05 0.000388730847683977 7.28549427491392e-06 1.27450039938168e-05 9.62329009042917e-07 2.38404926046454e-10 1.59019419330255e-28 9.17930958600985e-09 XM_005205313.1 CACNA2D1 PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 2/delta subunit 1 (CACNA2D1), transcript variant X1, mRNA. 0.0 1.313e+04 99.50 0.999453999453999 XM_005250574.1 CACNA2D1 PREDICTED: Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 1 (CACNA2D1), transcript variant X6, mRNA. 0.0 8832 87.15 0.983892983892984 TCONS_00181362_6 sp|P54289|CA2D1_HUMAN CA2D1_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-1; 0.0 1303 93.73 0.998452012383901 2 coding 0 0 0 0 -0.81493927558845 0.0117624029901584 -0.00574204716233692 0.903317766411432 GCCACAGCCTCGGCCGCGCCAGCCCGCAGACGCCTGTAGTCCGGGCGGACCTTGCTCCTTCTCCTCCCGCGGTTTCCAGCACCGGTCCTTCCCCCGGCTCCGGAGGGAAGCCAGATTGATCTTCGATCGCGAAGATGGCTGCTGGCTGCCTGCTGGCCTTGACTCTGACACTTTTCCAATCTTTGTTGATCGGCCCCTCGTCGGAGGAGCCGTTCCCTTCGGCCGTCACTATCAAGTCATGGGTGGATAAGATGCAAGAAGACCTTGTCACCCTGGCAAAAACAGCAAGTGGAGTCAATCAGCTTGTCGATATTTATGAGAAATACCAAGATTTGTATACTGTGGAGCCAAATAATGCACGTCAGCTGGTGGAAATTGCAGCCAGGGATATTGAAAAACTTCTGAGCAACAGATCCAAAGCCCTGGTGCGTCTAGCTTTGGAAGCAGAGAAAGTTCAAGCAGCCCACCAGTGGAGAGAGGATTTCGCAAGCAATGAAGTTGTGTACTACAATGCAAAGGATGATCTTGATCCAGAAAAGAATGATAGTGAACCAGGCAGCCAGAGGATAAAACCTGTTTTTATCGATGATGCTAATTTTGGGCGACAAATATCCTATCAGCACGCAGCCGTTCATATTCCCACTGACATCTATGAGGGCTCAACAATTGTATTAAATGAACTCAACTGGACAAGTGCCTTAGATGAAGTTTTCAAGAAAAATCGAGAAGAAGATCCTTCATTATTGTGGCAGGTGTTTGGCAGTGCCACAGGCCTGGCCCGATATTATCCAGCTTCTCCATGGGTTGATAACAGTAGAACTCCAAACAAAATTGACCTTTATGATGTACGCAGGAGACCATGGTACATCCAAGGAGCTGCATCTCCTAAAGACATGCTTATTCTGGTTGATGTGAGTGGGAGTGTTAGTGGTTTGACACTTAAACTGATCCGAACATCTGTCTCCGAAATGTTGGAAACCCTCTCAGATGACGATTTTGTGAATGTAGCTTCATTTAACAGCAATGCCCAGGATGTAAGCTGTTTTCAGCACCTTGTCCAAGCAAATGTGAGAAATAAGAAAGTGCTGAAAGATGCAGTGAATAATATCACAGCAAAAGGAATCACAGATTATAAGAAGGGATTTAGTTTTGCTTTTGAACAGCTGCTTAATTATAATGTGTCTAGAGCCAACTGCAATAAGATTATCATGTTGTTCACGGATGGAGGAGAAGAGAGAGCTCAGGAGATATTTACCAAATACAACAAAGACAAAAAGGTCCGTGTATTCACATTTTCAGTTGGTCAACATAATTATGACATATAAATCTATTGTGTATATATGTGTATATTTCAGGTTATTATTACGAAATTCCTTCCATTGGAGCAATAAGAATCAATACTCAGGAATATTTGGATGTTCTGGGAAGACCAATGGTTTTAGCTGGAGACAAAGCTAAGCAAGTCCAGTGGACAAACGTATACCTGGATGCACTGGAACTGGGACTTGTCATTACTGGAACTCTTCCGGTCTTCAACATAACCGGCCAAAATGAAAATAAGACAAACTTAAAGAATCAGCTGATTCTTGGTGTGATGGGAGTTGATGTGTCCTTGGAAGATATTAAAAGACTAACACCACGTTTTACATTGTGCCCCAATGGCTATTATTTTGCAATTGATCCTAATGGTTATGTTTTATTACATCCAAATCTTCAGCCAAAGGAGCCAGTAACTTTGGATTTCCTTGATGCAGAATTAGAGAACGATATTAAAGTGGAGATTCGAAATAAAATGATAGATGGAGAAAGCGGAGAAAAAACATTCAGGACTCTGGTTAAATCTCAAGATGAGAGATATATTGACAAAGGAAACAGGACATATACATGGACTCCTGTCAATGGCACAGATTACAGTTTGGCCTTGGTATTACCAACCTACAGTTTTTACTATATAAAAGCCAAAATAGAAGAGACAATAACTCAGGCCAGATATTCAGAAACTCTGAAACCGGATAATTTTGAAGAGTCTGGCTATACGTTCATAGCACCAAGAGATTACTGCAATGACCTTAAAATATCAGATAATAACACCGAATTTCTTTTAAATTTTAATGAGTTTATTGATAGAAAAACTCCAAACAACCCATCATGCAACACAGACTTGATTAATAGAGTCTTGCTGGATGCAGGCTTTACAAATGAACTTGTCCAAAATTACTGGAGTAAGCAGAAAAACATCAAGGGAGTGAAAGCACGATTTGTTGTGACTGATGGTGGGATTACCAGAGTTTATCCGAAAGAGGCTGGAGAAAATTGGCAAGAAAACCCAGAAACATATGAGGACAGCTTCTATAAAAGAAGTCTAGATAACGATAACTATGTTTTCACTGCTCCCTACTTTAACAAAAGTGGACCTGGTGCTTATGAATCAGGCATTATGGTAAGCAAAGCTGTAGAAATTTACATCCAAGGAAAACTTCTTAAACCTGCAGTTGTTGGAATTAAAATTGATCTAAATTCCTGGATAGAGAATTTCACCAAAACATCAATCAGGGATCCGTGTGCGGGTCCAGTTTGTGACTGTAAAAGAAACAGTGATGTAATGGACTGTGTTATTCTAGATGATGGTGGGTTCCTTTTGATGGCAAATCATGATGATTATACTAACCAGATTGGAAGATTTTTTGGAGAGATTGATCCAAGTTTGATGAGACACCTGGTTAATATATCAGTTTATGCTTATAACAAGTCTTATGATTATCAGTCGGTGTGTGAGCCAGGAGCTGCACCAAAACAAGGAGCAGGGCATCGCTCAGCATACGTGCCATCAATAGCCGACGTATTACACATTGGCTGGTGGGCCACTGCTGCTGCCTGGTCTATTCTACAGCAGTTTCTCTTGAGTTTGACCTTTCCACGACTTCTTGAGGCAGTTGAGATGGAAGATGATGACTTTACGGCCTCTCTGTCAAAGCAGAGTTGCATTACTGAACAAACTCAGTATTTTTTCGATAATGACAGTAAATCATTTAGTGGTGTATTAGATTGTGGAAACTGTTCCAGAATCTTCCATGTAGAAAAACTTATGAACACCAACTTAATATTCATAATGGTTGAGAGCAAAGGAACTTGTCCCTGTGACACACGGTTGCTCATACAAGCAGAGCAGACTTCTGATGGTCCAGATCCTTGTGATATGGTGAAGCAACCCAGATACCGAAAAGGGCCTGATGTCTGCTTTGATAACAATGCTTTGGAGGACTATACCGACTGTGGTGGTGTCTCTGGATTAAACCCCTCCCTGTGGTCCATCATCGGCATCCAGTGTGTGCTACTTTGGCTCTTATCTGGCAGCAGACACCACCAGTTATGACCTTCTCAAACCAAATCTGCAGATTCAACTCCAGACCCTGCTGAAACAGGAGCCCTCAACTGCATTAAAATAGGGTCAACTGCGAACTCAGCAGACCACTAGCTGGGCCCACCCCATGGCATCCATCTAAGACGCAGACTCATAAGGCACCCACTGGCTGCATGTCAGGGTGTCAGATCCTTCAACTTGTGTGAATGCTGCATCATCTATGTATAACATCGAAGCAGAATTCTATACATGCTCTATTGGAAATTTTGAAAACTTGTTGTTGCATTGTTGGTGATTACATGTTAAAGGGCTCCCCACACAGTTGTTTATGGATCGTGCAAATTGTCTTGATTTTGACTTGCTGCAATCCTTGTTCTTTTACCAAGAAAATCTCTTGGGGAAAAGAGTTGTTTTTTTTTTCCTTCACTTACTCTTCTGTTAAAAATTATTTCCTGCTTTGAGTAGTTATTATTGGAAATATATAGAGAGACACAGAGGGAGAAAGAATTAACATTGGTATAATCTGACAAAATAGAAATAATGGCTTATTTTCTACAAAAAAAAAAATGCCATGAATAAAATGCCTTATGAAGAATGGCTTCTTTGCCAGAAATATAACACAAATGATGGCCAAGTTTTGGTGGGTATAATGGATTGATTGTTTGAAAATAATAACTAAGAAATTAAAGGTGCTTGAGGGTAGAATTAATATGCGACATATGTCCTCATATATGTGAGCCCTTAATAAATGCTTTGATGTAATGTCCTTTTTGTTCACAGTAAAGTTCCGTAGTGCTAGCCAGAAACTTCAAAATGCTCTAAGAAAAGCTTGTTGGGGGGAGGGGAAATGTTTTTTCTTGTGATAAATGAACTTTGGTTACCAAGGGTATTTTGCATGATGCTGCTGCTATTTTAACTTCGGTTTGTTTCTCTCTTACTGTAGAGTATAGTCCATTGAAAAGTTAACTGAGTGACATTATTGTTATGTAAGAATCTGAACCTTGCAGTGTAATGCACTTAAGTCATCTTTTAAAATGTCTTTAAACTACTCTGAATATACTGTGCAATGTAAATGCTGAATGATTGGATTAGGTAAATGGTGAAATGGGAATTAATGGATTTTATACAGATTCGTGCTTTTGCCTGAAAACCTATGTACAGATATTTTAAGTACATAAATCAGATTTGACACATTTATTTTTTGAAGAGTACATATATGTTCTCAGTGAAGAGACATCCTAGGTTTCCTCTCTGTTCGCTGGAATAGTAGCACGTACAATCCCAAACTCGCTGCTGCTTTTGTTGCCTCCGTTTTAAATGATACGAGCACTTGACCAAAATTTCCACACAGTTTGATGAGGGTTTTACAATACTCTGAACAAATAGGAAACCTTGAATCTCTATGTATGCACATGAATACTTGATTGTGAATAATCAAAATTGTTTTTATACAACCTCATTAGTGAAAATGGTTAGTGTATTAAATCAGATATTTCATTATAGAGTAATATGGTAGAATTTATTTATGCTTTAAAAGATTATTTTCAGGGTTAAACAGTATTTGAAGAAAGGATAAAAACAATGAATGTGTAACAATTATAGGGAATAATTCTGCTGAAGGCTGGAAGTATGCAGATATTTGCTCTTTTTTCAAACATGCCAGAAACTGGTATGTGTCTATGCTGGAAATTTTCTTATATATCATTTTTAAGTAAAAATCTTATTAACATTATCCAGTATGCTTTAATATGCTTCATATATCAAAGATATAACCAATTCTTTAGCATAGTTTAAAAGATATATTTGTTTTGTTTTTAGCTTTGCACACATTTGTAATTCCCTTCACCACTAATATACCCTAGGCACCACTTGTGTACATTTCCTTATTTAAAATATTTTTTTATTTAAAAACGGGGCTAGGGGGAAATGGAATCACTTTGCCAACTATCGTTCTAAGAGTTGACATCAGTTACCATTTCTAATACATTGTTGTGGTTTTGTAGTCTCATTTGTAACTGGTATTGACATTTTAGAAAACACCAAAGTGATTTAAAAAAATATGGAACTTCTCACTCTAGTAACAATATGTTTAAATCATGTTGTTTGTTAATTAAATATTTAAAACTTATTGTTAACTTTTGCTAGACTATTTTAAATCATGAAAGTGTTGAGAAGGGGATATCGAAATATAGTTATGTTAGCTTGTGTACATAAACGACGCACATTAAAACAAGCAAATTGCTTCCAGCATACAACAGACTACCTTAAAATTATCTTTAAAATCTATTAAATATATTTTCATGGCTAATGTCACTGAAGTGTGTTTTCATCAACTACATGTTGTGTTCATCACAGTGAAACTTGGCATCTCCTGGCAGAGTCCTATTTGATTTCATTTGCCATCAAAATATATTTATGTATATGAGTCTTGCCATGATCCTTTATTTTCTGTTATAAATTAAACATATATTATGACAGCCACATATATGTTAATAAATTGGGTAAGAACATGCTCTCTGACTAAAAATTGTTCTCATACCTAATACTAGTCTTCATGCATTTTGAAAGACCGTAACACTCATCCCATCCAATTATTATGTTTACTTTAGGATTTTTCTGAGTTTTGATTGTTGAACAATAACTTAAATCACAGCCTGTTATAATATTAATTTTCAAAGACTTAATAGTACAAGAGATCAAGAAAAAAGCTTTTGAACTCCTTTTGCTTACCTAATGTTTTGCTGTGCTCACGCAGCTGTGTAGTTTTCACTAAAACAAAACCAAAATAAGTCTTGTATTGGAGTTGAATAACAGAAATGGATTTTGCATTAATGATTTGTTTATATTTTCTTCATTTGAACAACCAGCATTACTGCCAAACACCAATCGTGGTCCATATTTGTAACAGGTTTTTAACATGACATAGTTAGCAAGTTTGACTGAAGAGATTTTTAGGTCCTGGGTCTAATAAGATTTTAGTATGATCTTTTTTCATGTTTCTAATGCTTGAGGCATTATTGCTTAACTTGGAAAAATCTAGACAGTGTTGCTGCCATTTGTAAGTTTTCCTATACTATTCCTTTTATTAACTTTAAAACTGGCCTTACTGGGTTCAAATAGGCAGTATCCCTTTTAAGTGACCTTTGCAACTCAAGTGTTACTTGCTTATTTGATGCTCTTTTGTATTTTACATCTCATTTAAATCTTTCTCTCCACCAAAGCTTAAATTCTATGTCTTAATTTAAACTCTGAACTATTCCATTAATCATGTTAGTTGACATTAAAGTGTCTAGAGGTACAGAGGCTGACCTAGGGAAACAAAATGGATGTTGTGACTCAGAGGATACAGTAGAATGATGGTCTCACCTGCCCACAGTTTCAAATATGTTACAATTATCTGGAGCCGGGACCTGTGTTGTTTTCCCATAGCACAGAATGTTAATACTGCTATTATTCCATGTACATTTCTGTAAAGAACAAATCAATAAAGCAAAGGTATGAAGTTTCTTGATTTCTTGAAAAAGTTCCAGGATGTTAAAGTCTTAGAAAACCTTTACCAACAGTTTCATCTACTTTATTTCTAATTCACAAGATTAACTCAAAGAAATTCTGAGACTAATGGGATACTGTCTTGAAAAGATGCCAATTAAGTCTACAGTGTGACCTGACAGAGCTGTCTTTTTTGTTGTGCTGTATGTTGTTGGATCATTTCTATTAGGGATACTTTTATTGAAATGCTCAGTGTGCATCCATGAAAAAGGCCAAGTGGCTTTGTGAACAAAAGATACTTTCTCCCCTTTATTATGTTCTCTTGACACTTTTGTGGAAATTAGCCTGATAAAAACATTTTTGTAAAAATTTGTATATTACTGTTATAAAAATATTTATAATCCCAGAAAATGTTGTGTTAAATCTTGTGCAAAAACAGTATATTCAGAATAAAAGTTTATCATTTAAAGTCACCA EMBV3_06040 CCCTGATGGTGATGATGGTGGTGATGGTGTTTGTCATCTGCTGGATGCCTTTCTATGTGG Gene GeneID:540013|SSTR1:NM_001030321:44_cdna Constitutive 0 NULL GeneID:540013 21 GENE SSTR1 SRIF-2 SS1R somatostatin receptor 1 EMBV3_06595 CAACAGCAGGTAGCTAAAGAAAATCAGCAGCCCTGAGAATAGGTCATCTCTTGGCCCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14894 GAATACCTACTTCCGCCACTTCAAGCTCTACAAATATGTCTTCACACCCCAGGTGCGGCT Gene GeneID:615350|LOC615350:XM_002698065:39_cdna Constitutive 1 NULL GeneID:615350 25 GENE LOC615350 NULL similar to LOC90835 protein EMBV3_32708 CAGATTCCCACTGTCTTGGCAGCACGGGGCACAGCCGTGTCTTCAGGAGCACCCTTGAAA Gene BVT0102_387047 + 0 NULL GK000025.2:9914804-9974847 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29315 GAGCGGACGGACGGCGCGCCCGAAATGCAGGTGAGTGAGAGGATGCTGGCGGGGGGCGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04090 GCCATGGTTCAAGCAGAGAAAGGACAACACCCTTCCTGGAGATTATACCTGGTAGTGACC Gene BVT0102_046846 - 1 EMBV3_15411 GK000008.2:81512052-82096667 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226013 1 XLOC_137904 NonCoding TCONS_00226013 XLOC_137904 NonCoding NonCoding - 8:81540248-81550834 - TSS169079 1213 2 TCONS_00226013_4 55 0.0544105523495466 2 0.885592820028342 5.60827608084821e-05 0 3.81450512223672e-05 0.000177994325412274 2.03511727319853e-05 5.89786315100826e-05 4.8076757871182e-06 0.000234053305157772 9.75697587864348e-05 0.000244223953010881 0 0 2.36544294215109e-06 0 0 0 0 0 0.000149763884444372 0.000160073173959411 7.50798566123999e-06 0 0 0 1.71355661116851e-05 0 8.69453078687747e-05 1.58370581529989e-05 0 0 XM_003582318.2 FAM184B PREDICTED: Bos taurus family with sequence similarity 184, member B (FAM184B), transcript variant X1, mRNA. 3e-28 131 89.69 0.0791426215993405 0 noncoding TTCTTTAATTAGATGAATGATGACTGGATATGGAATCTTCAACAAAATATTTCTTGATATTACTGTAACTTTCTTATCCCAGAAAGGGACCATCTTAGATGATTCTTGGATAAGAATTTGAATTATTTGGCCATATCAAATTGGGTGATAAAAATGTGTAGAGTTAAAGGAGTGAATTGACCAAAGCTATATGGTCATTTCTGCAGATGGTAGAGAGGACAATGGAGGAGGCAGTTGGGATTCAGGGGTGGAAGTCTTAGTGCTCTGTGTGGCAAGTGAAAGTCCACTGTGAGAGAGGCAGTCTGATCATTATTCCTCTTATTTCTTGTAAGTTTAGGTGATACTGTCTCTGAGGCTTAAGGTATGTCCTTGTGATACATGTCAGTTCAACTCAGTGTGCCTCCATCATGTGAAGAGGGCTAGATGGCTAGAGAGCTATATTCTACAAGACTTAAAATGTCAAAGACCAGCAATCACGATTCCCTCCTAGTGCCCCCTTCCTGCCAGAGAGCATTCTGAATTGGAGGAAGTATAGTGCTGGGTGGGAAAGAGGACAGACCCTAGGAGGGGCCTGTAAGGAAGATGGGTTTCCCCCAAAGTGTGTGGAGTTTAACACCATGGAGATTAGGTGAAGAAATCATTGAGAGAGGTGTAAGTTAGCAGGCCAAGGTTGAGTATGTCCCCAAGGATACCCTTTGTGAAGATGCTTTTCCTTCCAGTTATGTGTGCTTTCTCCTCAAACTATGGGAGAAAATGGATTTAGAGTACAGTTATAATTTTTCTCTTCTAGGATATAGTTATCTTGCATATCCTTCCTTTATACCTGCAGGAAAGTCTGACCACCCCTTCAATCTTAAGTGATGCCCAAAGTGGAGAAGAGGAAATAGGAAAATGAGGGAAAGCATGGACATGTATCCAATCAGTATCCTAGCCCAACCAGGAGCCATGGTTCAAGCAGAGAAAGGACAACACCCTTCCAGCAGATTATACCTGGTAGTGACCATCAGGAAACCAAGGTTCCCCGAAGGATGGAGCCATTGGGAGGAGCATTCCAAGTAGACATCCATAAACATTCTGTTATACTTCAAATAAAAAAAAGAAAATTCCAGGAGATAGTGAAGGACAAGGAAGCCTGGTGTGCTGCAGTCCATGGGATCGCAAAGAGTTGGACATGACTGAGCAACTAAACAACAAAAATAGAAATAAGATGGAG TCONS_00228416 r 5' 28162 TCONS_00228416 r 5' 28162 EMBV3_19083 GCCCATGTTTTTCCAATGTTTTCTTCTGTTACATGGTGCCTACCACCTTGAGGGGCACTT Gene BVV0101_040325 + 0 NULL GK000011.2:95911958-95925095 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028903 1 XLOC_015617 NonCoding TCONS_00028903 XLOC_015617 NonCoding NonCoding LOC100848425 11:95915512-95917762 = TSS20219 2078 1 TCONS_00028903_1 65 2 0.0769230769230769 0 0 8.90663750267784e-06 3.5966045495498e-05 4.19012196355263e-11 0 0 3.13098131845004e-05 5.47318905619507e-10 0 2.14634550118867e-06 3.44999409380032e-06 0 0 2.36102129390995e-06 0.000788025451843257 0 2.16805905771493e-05 2.05102250911509e-05 0.000103822481110236 1.46088810325192e-06 0.000171411019861946 4.85632642014241e-05 7.56889343897531e-05 1.16696337303936e-05 0 5.63922123508459e-06 8.13319426359359e-11 9.34477892926391e-06 0 NM_173690.4 SCAI Homo sapiens suppressor of cancer cell invasion (SCAI), transcript 0.0 892 85.36 0.382098171318576 0 noncoding 0 0 0 0 -0.0788781638938985 0.686567951533952 0.00207928650632513 0.977351124662948 GGCAATAATTTTTATTCCTATTTCTTGCAGAATGAGTTTTTTTTAAAAAAAGAAAAAACTCTTGTTTACCTTTTATTAAAAGGAACTCAATGGTTCAGTAAAATATCTTAGGATTTTGTGTTTGTGGCTTTTTATAGTTATGTGGTTACATGCCTTTTGTCCCATAGATCATATGGCTAGTTCTCCAGCTGTTTTTTATTTATTGTTTTTTAATAAACCTTGCCACTCAACAATCAGATATATTTTGGAGGCTTCTTCCTGTCAAAGTAGAAAGGTTTTAGGTAATAGGAAAGGCAGATGCAATGTCCTACATTTTCATAGTAGAGCTTACAAGTGAAAGAATTTATTCAAATAGGTTATCTTCACTGTGTAGCACCAGTAAAAGTAGTGGTTTCATTCATCATTGAATGTGATAAAGCAGTTTTAAGTCATTTCCTACTTAGCACTAAAGAATTTTGTCATTTCAGGCCACATTATTATTTTCTCTGAGTAGTTTTCCATTGTAAGGTTGAATATCTTTTTATTTATATCATCACTAAGGGTTAAGATAATCAAATAGGAATTAAAATGTTATACTTGATCTTTTTTCCCTGAAAATAATGGTGAACCTATTGTCTATATTATGGATATTAGGCAGAAATGCACTTGTTTCGATCATAGAAGAAATTACATTTGGAAAATATAATTATTTGATTTTCTAGTGGTGTGAAATACTTTTTAAAAATTGTGCTTGTCTGTAACTGAAATGTTATAGAATTTCTTGTTGCTCATCTGTATTAAATTTTGGGTATTGTGGGTTAATACTTTAGAACAAAATCCATCAGCTCAGCTCGGTGAGCGCAACAAACCGTTTGGATTCACTAGTTTTATATGTGTTCTCAATAGAATTACATTTGAAGGGGCTATTTACTACCAGTGACTAAGGGGGAAAATTACATTGTCAATATCATTTGACTTGAACAATTGTGGCATTGTAAAAGTCTTACCTGTTGTGTTTCTAAATTGCTTAAGCCATACATACTCTTAAGGATTTTTTTATTGTGTTCCTTCTCAGCAGCATTTTTCTGCTATGTCTGTTATGGTTAATATGTCATAGATTTTAGAAATTAAGAAGTTACCAAAACATTTTATTTTCCTGATCATCACTTTTGACTCTTGTGTGATATGTGATTTGTCATAAAGGATAGCAAGCCTTCTACTACTTCACTAAATGAATTTCAGAGTAAACACTGTGATTCTGCAGAGGATTCAGTAGGCCCTTGTTTTTCCAATGTTTTCTTCTGTTACATGGTGCCTACCACCTTGAGGGGCACTTAAATACTAGAGGATGAAGAGTTAAACATTGTTTTGATGTTTATTGAATAAGATTACAGAAGATTTGATTTTTGTCATCAGTGTATTGAAGACATTTTTGCATTGATAAATGTTCTCTCTAGGAATGTGATTACATTCATCAGATGTGAACTCTTGTAAATGAATTTTGTATCTTGAATTCACATATATATTAAGTGTATCATCAATATAAAAATAAACATTAAAATTATTTGCTTAAAGTTTTTGTTACTTCTTCAGAATTGCTAACAACATAAGCGCTAAACTGGACAGGGTTTGCTTCTTTTCAGATAATTCTTCAGACAGTTGAAACCATTTGAGGTTTAGGATTCCTTGGTGTTGTTGCAGTAAATTTCTTCTGAGTCCTAGTCTTGGTTTTTTCCCTGCCCTGCTCCTCGTGGTCAGAACTGGGACATGCTGAGGGCAGGATTGTTTCAGGGAATTGAGATAAAGCTGCTGGCGCTCCGGCTGGTGTTGGGTTTGGGCAGAAACACATAGAGCTTCAGTGTGGAACGTCTGCCTCAGCTGGCGTTGAGTCCGGAGACCCGATGTAGTTTACCAATTTGTACTGTACCTTTGTACAAGGCAGTTTTACCTGTCTGGACTTCCTTCATCTGTCAAAAGTTGGAGGCCCATTCGTGACTAGTGAAATGAACGTAGTGTGCTGACACTAGCGTGGTTTTTCTAATGATTCAGAGTGCACTATATGAGATCACATCAATTGCTCAGTTGTGTCTGACTCTTTG EMBV3_37724 GATAAGCAGTGCGAACAAGCTGTGTATCAGGTTCCCACCAGCCAAAAGAAGGAAGGTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02252 GCAGAGTTGCTGCTAGGGGACCAGGAAAGTCTTGTTGTTATGAATCTCATGCTACAGAAC Gene BVV0102_351435 - 1 EMBV3_13128 GK000008.2:95826163-95847667 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32138 TTGCAAAGCGTTTTTATGACATGGCAGCCGAAGCCAGCCCAGATGCTCAAGTACCAGTCT Gene GeneID:614959|SEL1L:XM_002691105:14_cdna UTR3_Alt 2 NULL GeneID:614959 10 GENE SEL1L NULL sel-1 suppressor of lin-12-like (C. elegans) EMBV3_28248 TGCACCAAGGGCGGAGACCAACTCTTCTGCGTCCAAATAGGATCATCAGCGAATGGGAAA Gene GeneID:507749|C6:NM_001045979:68_cdna Constitutive 0 NULL GeneID:507749 20 GENE C6 MGC137494 complement component 6 EMBV3_22155 TTCCTTAATAACCCATTTCTTTTAACCTTATTAAGAAAGAAAGGAAAAGAGGGAGGAAGG Gene GeneID:537246|TRIM24:XM_002686994:851_cdna Constitutive 2 NULL GeneID:537246 4 GENE TRIM24 NULL tripartite motif-containing 24 EMBV3_23645 CAATCCTTGGGACGACACACAACAACAGTCTCTCTTTAATTGGGGTCAACGATGGCATGG Gene BVT0102_066574 + 0 NULL GK000015.2:1255599-1272683 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06465 GAGGACAGTGCGAGTGAAAACACAGCCTTTCTTCCCCTGAGTCCCACAGCCAAATCAGAA Gene GeneID:539977|NRG3:XM_002698893:43_cdna Constitutive 0 NULL GeneID:539977 28 GENE NRG3 NULL neuregulin 3 EMBV3_13366 CACATCCCCGACCTCATCACATGCAGGCTGACCTCTTTGTCTGTCTTCCAGATTGTCAGT Gene GeneID:538977|PANX3:NM_001144084:32_cdna Constitutive 0 NULL GeneID:538977 29 GENE PANX3 NULL pannexin 3 EMBV3_15856 ACTCATGTTACTATACTCCTGGCAAAGACCTCTGTATCAGCTAGTCACGGACCTGCGGAG Gene GeneID:406200|PRP4:NM_212448:38_cdna Constitutive 0 NULL GeneID:406200 23 GENE PRP4 MGC133712 PLP-III PRP5 prolactin-related protein 13 EMBV3_16132 TCAATCCGAGGTCAATCGCAGCCACAGAGGGTAATCTCCAGCTCTTAGACGTCATCCACT Gene GeneID:100337062|LOC100337062:XM_002688404:76_cdna Constitutive 0 NULL GeneID:100337062 6 GENE LOC100337062 NULL protein tyrosine phosphatase, non-receptor type 13-like EMBV3_18880 CTCCCGGCCTTTGTCCTCACTTCTCCTGAGGCATTTGTGTGCTTGAATTTCTTCCCCATG Gene GeneID:521133|SEC14L3:XM_002694609:130_cdna Constitutive 0 NULL GeneID:521133 17 GENE SEC14L3 NULL SEC14-like 3 (S. cerevisiae) EMBV3_32192 TACAAATAATTCAAGATTTGGATTGACATTACCTTCATCATTTAAAAATTCATTAGTTAA Gene GeneID:497029|GRB14:NM_001011681:67_cdna Constitutive 1 NULL GeneID:497029 2 GENE GRB14 NULL growth factor receptor-bound protein 14 EMBV3_24774 GCACAGACAGCAGGCATAGCTGCCGCGGCGTCTGCCATCAAGGGCCTGACCATGGGGGGC Variant GeneID:509816|MRPS11:NM_001035078:17_cdna 448^513 3 EMBV3_19806 GeneID:509816 21 GENE MRPS11 MGC127419 mitochondrial ribosomal protein S11 EMBV3_07476 CAGGTGTGTTTCTGACGAGAAAGCCGAGAAGGAAACTCGAGTGGTGTGCTCCATCATCTT Gene GeneID:286803|TMEM189-UBE2V1:NM_001034042:8_cdna Constitutive 1 NULL GeneID:286803 14 GENE TMEM189-UBE2V1 DDVIT1 MGC128699 UBE2V2 TMEM189-UBE2V1 readthrough EMBV3_00197 GTCCTCTCGGGGACCAGCAACAACGAAAGCAACTCAGACTTCGTGCTGCCTGATTACAAA Gene GeneID:616212|FBXL2:NM_001099153:226_cdna Constitutive 0 NULL GeneID:616212 22 GENE FBXL2 FBL2 MGC166002 F-box and leucine-rich repeat protein 2 EMBV3_00793 GTAGGCCTGGATAAGTCACTCTCTGGGACTGTTTTTGTATCAGTTAGGGGAGGAATGGGC Gene GeneID:505492|SLC23A1:XM_002689263:183_cdna Constitutive 1 NULL GeneID:505492 7 GENE SLC23A1 NULL similar to solute carrier family 23 (nucleobase transporters), member 1 EMBV3_01902 CGACGGACGCCTGAACGTAGCTTTTCGATTCCCTTGACGGATCCCGAGAAGTATAATCCT Gene BVT0102_409703 + 0 NULL GK000009.2:9700028-9761397 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236596 TCONS_00236594 TCONS_00236595 1 XLOC_144520 NonCoding TCONS_00236595 XLOC_144520 NonCoding NonCoding - 9:9734540-9737029 - TSS177082 606 2 0.757234726688103 0 4.97447153338238e-05 0 0 0 0 0 0.000312328520398674 0 0.000236298197519203 6.11005274892351e-06 0 2.54184018104433e-05 0.000308694004537604 0.000540155461897083 0 0 0 0.000958394867960026 0 0 0.00130581871505334 0 0.000216827232439571 0 0 0 0 1.01766276123415e-05 0 XM_005210638.1 FAM135A PREDICTED: Bos taurus family with sequence similarity 135, member A (FAM135A), transcript variant X6, mRNA. 0.0 749 100.00 0.683168316831683 0 noncoding 0 0 0 0 0.0312720666923073 0.838484530975538 0.0395030583433296 0.533636764843708 AAGAGGGAGGGCGAGGAGAGCGATTGCTGGGCTGTAGTTCTCGCTTTGTCATTTATTTTTCCCTCTTCCTCACCTTCTGCCTCCAGTCCGGGGTGAAGAGCCTGGTCCTTAAGCAGTAGGAAGGGAAGGGACAGCTGCCGCTTCGGAGGGGGGAGGGGGGCGGCGCTCAGTTGCTGCCTTTGAGGGGAGGTATCTGCGTTGCTATGGTTACTGCTTGGCGACGGACGCCTGAACGTAGCTTTTCGATTCCCTTGACGGATCCCGAGAAGTATAATCCTTTGCTTCATTCTCCCTAGTTTCTGAACCTTTTGTGGTGCGGAGAGCTAAGTGTGTTACAAAAGCAAAGTTGAAAAGAAGGAAGTTGCGGCTGAAGCGAGTGTTTTACAATTGTGGGTGTTTAGTGGTGATGGCGCTTAATAACACTAAACTGCACTTTTTAAAGTGGTTTAAGTGGTGGAGAGGGACGGATAAATTCGGCATTTTTGAGTAACAGTCGCACAATATTGGCTCAGCTGAAGACTGAGAGGTTAGAAGAAACGAATATTGTACATCTGGAAATAGCCTAGTGGAAAGATATCTATTTGTTGCTGGACATCAACTCACTCA TCONS_00234643 r 5' 2653 TCONS_00234643 r 5' 277 EMBV3_16228 GCAATGCAGCATGCTGAAATCTACTACAAAAAGTGGAGGCCATTCTGCTTGAAGTTTGAT Variant GeneID:511011|C11HXORF26:XM_002699986:75_cdna 296^436 1 EMBV3_15714 GeneID:511011 X GENE C11HXORF26 NULL chromosome X open reading frame 26 ortholog EMBV3_34381 AAACTTTCAAGCCCGTACTGGGTGCTGTGCAGGAGATAGAGATGCCCAACAGAGGGGCCC Gene BVT0102_025098 - 0 NULL GK000010.2:53842022-53958911 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014013 TCONS_00014012 1 XLOC_008233 Coding TCONS_00014013 XLOC_008233 Coding Coding MNS1 10:53914801-54044830 j TSS10250 5862 1 TCONS_00014013_13 453 0.023712043671102 12 0.955009690220568 0.00058866309798595 0.000537462408351082 0.000782333484490276 0.000197676686639365 0.00055280332084206 3.0068244942821e-09 1.91806302727975e-15 0.000111738166548036 0.000541259781580388 6.789127047261e-161 3.88538723430162e-119 6.0959406858329e-26 0.000114597188691064 1.04042375148698e-22 3.5291934410483e-06 4.30020863665891e-41 2.73600257606978e-33 1.91749233721951e-94 6.49329466373746e-07 0.000505108399282083 7.89593822891388e-05 1.55568655769918e-84 1.45891926271521e-71 5.68977961626905e-38 4.06919374019053e-05 1.19993168612162e-13 0.00116011734079069 1.43504788585696e-06 4.28019984807157e-60 2.77063699132443e-28 XM_005211696.1 MNS1 PREDICTED: Bos taurus meiosis-specific nuclear structural 1 (MNS1), 0.0 3505 100.00 0.331286250426476 NM_018365.2 MNS1 Homo sapiens meiosis-specific nuclear structural 1 (MNS1), mRNA. 0.0 1997 87.23 0.278062094848175 TCONS_00014013_13 sp|Q2KIQ2|MNS1_BOVIN MNS1_BOVIN Meiosis-specific nuclear structural protein 1; 0.0 784 98.46 0.997792494481236 0 coding 0 0 1 1 0.0770934747975375 0.774198680281209 0.0300048869238431 0.536951505954472 GACTGAGCTCCTTAAAGTAAACAGATTACAGAAAGCAACCCCTTCCACACTCACTCAGCAGAACTGGATAAGTAGGAGCTCTGACGTGGTCATCGTGGTGGAGACAATGCTTTCCCGATAGATGGGGTTTCAGATTTACTGTTATAAAATGATACAGAGGATATTTATCTTTATCACTGTGTCATCCCATACCTTTAAGGCTGCATTAGCTAATGTCATTCATTGGCCAAATGTTTCCCTCAGGATTTGGCATTGTTATAGGATGTCTGCTGAAGCCAAGCTCTGTGCTAGGCATCGCAGGCACGAATATACATAGAGGAAGAGACCATGATGACTGCAATGGGAAACACAGTGAAGCTCTGTGGGAAGCCAGAAGGCATGCCACCATCACAAGACCAGCCGTGTTGTAAGCTTAGCGTCTGCCTGTTTGTTGGACTCACAGACCATATTATCCCGGAGCAAGTGTTTTATCTGCATGAAAAGGCAACACTGGAGCCCACGACTGGTTTTCAGGCAGCTCTGCCTTTACCCTGACTTATGTTGACAGATAAGACAGGAGGGCTACCCGAGGGTGCTTGAGTCCTTCCTACCTAGGAAACCAAATGCAGACGAGACTCCGGAGAAGGAAAGTCTCATCTCTTACAGAGAAGTTCTGGGGCATCTCGGATGCCTGAGCTGAGGACAGTGATGTTCCTGTGACCACCAGCTGAGCATCAGAATCATTCCCCAGTATCTGGATGATGGGAACCTTGAAAAAGACACCCCCTTGTCATGGCAAGGGTTGAGGTCTGGGCAGTCCCACAGGACTTGCGAAGCATCCATCCTGGATGACCAGGGCAATAAACACCTGTTTTGAGTTAAGAATCAGGATAAATTCAAGGGAGACTCCCAACCACCACACCTTAGTTTTCCAAGGTCTGAGCAGCAGAAATCCAAGAAGGGTCCTGATTATCAGCGCTTCTTAATCATGACTACAGCTTCTGCCTGGGAGGTTTGAAGATCAAAAAGAAAACACGACTCCAAGGAGATGGAGCCCACCAGAGGCTGCTCTGGGCTCCTGACTTGCCTCTAGTTTACTTAGTGAAAACAACAGCAATGAAGAGCTTGCATAGGCAAGGTGTCAAGGGCAAGGGTTGAAATGGCTGTGGGGCTGTGAACCTGTGCAAATCCACCCACCATCAAAGCTCAGTCCAACTACTCTTCCTCTTGGTTCTCCAGGCCCTCGCTGGACCACATGCGTCTCTCCCTCCTCTGAGCCCCTCTCACAATGTGCAGTTTAGCATTTTATTATATTTAGTCTCATAATCTAATTGTTCGTTGTACACTGAGTTACCACAACAAAATCACATTTGTGTCTTTCAGTTCTTTGAAATGAGAGTTACAGTAGCAGGCGTGCAGCAGGTGTTTAATACTTAATCTAATTGGGGATCAGAAAATAAGAGCTTGTGGAAACGTTCATATAACTTCCTCCTTTCACAGAATAGTACACAGATCCAGAGAATTTCTGCTTTATCCATTTCACAGGTGTCTAATGAAACTTTCAAGCCCGTACTGGGTGCTGTGCAGGAGATAGAGATGCCCAACAGAGGGGCCTGGCTCTCATGGACCTTTCTGTGAGGCATGGGTAATAGGATGCTTGCCCCAATCACCAAAGGGGGAACCCCATGAGGAAAGTAAAAATAAGCCTGAGGGGTCTCAGGTGAGGGAGATAATGGGACTTCTGAGGGACTCCAGGTGGGTTTATGAAAAAGGTGGCAGCTGAATTCCATGTGGAAGGATGTGCTCTGCAGGAACAGGGAAGGGGCATCCAAGTGGGAGTACGCCGTGGCCTTCACCAAGCTTTACATCCAAGTCAACACCAGCCATGGGAGTCCGCTGGGACAGGTGTGACTGCGGCTGCCCTCCACGCCCAACCTTCTGGGGCGTCTGCTGAGGAAGAACATGCCTGTGCACCAGACTCAGAGCTCAGAGTTCCTCTTGATGTGGTCACCCAGCTCTCCACACCCAAAGAGCGCTGCCTCTCTCCTCTTCTCAGTTCTATTTACTCCTTCTGGAGCTTCTCTGGTGGCTAAGACTGTAAAGAAGCCTTCAATGAGGGAGACCCGGGTTTGATCCTGGGTGGAGAAGATGCCCTGGAGAATGGTATGGCAACCCACTCCAGCATTCTTGCCTGGAGACTCCCATGGACGGAGGTGGACTCTGAGCCTCCAGGGTGGGCTCAGCCCCGGAACTCCAGACCGAGGCCCAGCTGTGTGTAGCGCCTCGGCCCACATGTGCTGCGCATTAGCCTCTCCTCTCAGGGCTTGGCGGGTCATCACAAGGTTCACATCGCGCCCCGGAGACAGATGCTGCGGGCTTCTCTCTCAGCTTCTATTCTGCCGTTGCTCCGCCCCAGGGTCTGCTCTTCCGCTAGGGAAGCCAGGCTGGGCCCTGTTTCTGGGAAAAGCAGTGGGTGGCTGAACGAACTCAGACCCGACAGGCCCAGAGCTTCCAAGCTTTCCCCGGCCTGGATTTTCAGCCTCCCACCTTCAACCTGACTTCTAGCTTCTGATGGCCATGTCAAGGGGAGCTCTGAAAGTGGCATCTGGAGGAAAAGGGAGCCTCTTGGGCCCTCCAGCAGCTGGTGTCTAAGGAAACTTTCAAGGCACTGTGCCATGCCCTGTGCAGGAGACAGAGGTTCTCAAGAGAGGGGCCTGGCTCTCCTGGACCTTTCACTGAGGCATGGAAAATAGGATGCATGCCCTAATCACCAAGGGAGGGAACCCAAGAGGAAGGCTTCCATAAGGAGAACTTTGAGCTTCAGTGAAAGGCATCAGAAATTAGTAGATATAAACTATTGCAAAAAATTGCATGTCGAGGCACTACAAAGGCTACAGAATCAAACTAGGGACCAAATGGTGCAGAACGAGAATGATGACCGGGCTGAGCGCAAAAGGTTCCTCAGATTATTACAGGATGAACAATTTGAGCTGGATATGGAAGAGGCCATTCAAAAGGCAGAAGAAAACAAAAGATTGAGGGAGCTCCAGCTTGCACAAGAAGAAAAATTGGCTACGGAACTGGCAAAACTAAAACGTGAAAGTCTAAAGGATGAAAAGTTGAGGCAACAAGTAAGAGAAAACAGTGCTGAGCTCAGAGAATTGGAGAAGAAATTAAAAGCAGCTTACATGAATAAAGAAAGAGCAGCTCAAATTGCTGAAAAGGATGCCATTAAATATGAGCAAATGAAACGTGATGCTGAAATAGCCAGAACTATGATGGAAGAGCACGAGAGGTTAATAAAGGAAGAGAGTGCTGCAGAGGACAAACGAAACCAAGCAAAAGCACAGTACAGTCATGACTTAGAGAAACAACTGGAGGAACAAGAGAAGAAAAAGCAGGAAGCTTATGAGCAGCTGCTGAAAGAGAAACTCATGATTGATGAAATTGTTAGGAAAATCTATGAAGAAGATCAATTGGAAAGACAGCAAAGGTTAGAGAAAATGAATACAACTCGAAGGTATATAGAAGAGTTTCAGAAAGAGCAGGCTCTCTGGAGAAAAAAGAAACGGGAGGAGATGGAAGAAGAAAATAGAAAAATAATAGAGTTTGCCAAGTTGCAGCAACAAAGAGAAGAAGATCGAATGGCAAAAGTTCAAGAAAGTGAAGAAAAAAGACTACAGCTTAAAAATATGCTGACTCAGAGGTTGGAAGAAATGCTGCGGCAACGTGAAGATTTAGAACAAGTGCGACAGGAATTATACCAGGAAGAACAAGCTGAAATATATAAGAAGAAACTAGAAGAAGAAGCAGAAGAGAAATTGAGAAAGCAAAAGGAGTTGAAGCAAGATTTTATGGACCAAATGGCCTTGAAGGAATTAATACTTCAGGCGGCAAAAGAGGAAGAGGAGACATTTAGAAAAGCCATGCTGGCAAAATTTGCTGAGGATGATCGAATAGAATTAATGAATGCGCAGAAGCAAAGAATGAAGCAACTAGAACACAAGAGGGCCGTGGAAAAACTTATAGAAGAGCGCCGCAACCAGTTCCTTGCAGACAAACAACGTGAACTGGAGGAATGGCAGTGGCAGCAAAGACGACAAGGATGTATAAATGCAATTGTTGAAGAAGAAAGACTAAAACTTCTCAAAGAACATGCTACAAAACTACTAGGATATCTCCCTAAAGGAGTATTCAAAAATGAGGATGATATTGATATGCTTGGTGAAGAGTTTAGAAAAGCATATCAGAAAAGGAGTGAAATTTGTGAGAAGTGATACCGTCAAGGTGTGGTAAAACCTGGGTTCTTCTGTACGTTACCACTAGGTGTCACTGTGACTTTTGTTTTAGAGTTCAGTGAGTAGGACTCCTCCAGTGTCTCTGGATTTTCTAAAACATTTCTGTATCATTTATAAACAATTAGTTGTAAGAAAACATTTGTTTTCTGATAAAAATTAATACTTGTAACTGCAAGTTTTCTTTCAATCACTATTGTTTTTGTACTGATAAAATTGAAGATCTGAATTCTACACCACCCTCCATATATTGAGTTGGCCAAAAGTTTGGATTTTTCTGTTACACATGGATCCCTGTACCTATCAAAACAACCCAGGAGACTAAACTCTTCATACCACGTCTATGTTTGTGTCTAGGAACTTCACTTCCTTGATTTGGCTGGGGAAGACTCTTCCTATTATGAGAGGAGAAAAGTACAGAGTGAGGAATTTCAGAGTGCTTTATTACCTAATGCAGTTATCAATAAGAACATAGAAAGTTTCTCTCAGGTAAACATCGTTTACAAACTAAAGCTAAGTCTCTAGAACATATTTTCTATGCATATGCAGCTGAAAGGGGCTAGAAGGTCATAAAAAAGATAAAAGAATCGAAAGTTCAATTTCTGTTGCTTTATTTTATAAAACATTGCTAATAATTAGGTATCAATTTTATATCCCCAAACCTAAATTTACTTTAAGAGTATATCCACCACACACTAGAGGTTTAAAAGTAGATCACTTATTAATTTCCCCATTCAAGTGCCTTCATAAATTCTTCTTCAGTGAAAGACAGCATCTTGGCAGCTTCAATATGCATCTGTGTTTAAAGAAATCAATATTGTCTAAGAGTAGACCACAGAACAATAGGAAATTTGTGAAAGTGCATGTATAATTCTAATTACAGTAAACAGGTTTAAATAGTAATTTCATTCAGTGAGTAGCCACTAAAAACCCTGCCCACTGGTGGTATTGCACCAACCTGTTTAGAGAACAATTCCATGTTGTAATACCTAATCTTTGCAAAAGGTGACAGTAGCAAAAACATGAATTCACATCCTCTTAACCACAAGGCAAACCTGTGTGGTGACCACAATAAAAGTGGTTTGGAATCAGTTTCACTCCAAGATTTCAAGAGGCAAACTGATCCCTTTTTAAGATTATAGTTATTTTTTATATTTGGTATTATTTTCTTTAGTTAGGGAGTATCCATACTGTATGGAAAAAGAACTAGTAAACGTTTCTAATTTACTTGCATCAATGTATAGATAACATTTTGTGACTAAGCATGGCAATAAAAACTATACCTGAAGGAGAAATACTAAATGTCTTAGTAGAAAGAGCCAAATAATATCCAGGATTTATTTTAACTTTGTTTAAGATAAACTCACCTTCTGCCTTTTTAAAACATCAATTAATTTTAACTGTTTCTTAAATCCTATCATTAATTCTCCTTTTTGTTTTTCTAGCTTCTTGTTTTCTGATTTTAATGCTTCGATTTTTTGGTGTTCTTCATTTGCTATATCCTGCAAAAGGAAAAAATCCTATGTATTCTTTACAGTATTTTAATGGAAAAATTATATCAACAATAAAAACTTAGGTTTAAGTTTCA EMBV3_33484 CACTGTCAAGATTGGGGACTTCGGAATGACTCGAGACGTGTATGAGACAGACTACTACCG Gene GeneID:787068|INSRR:XM_002685964:260_cdna Constitutive 0 NULL GeneID:787068 3 GENE INSRR NULL insulin receptor-related receptor EMBV3_12714 TGGACAACTGTAAAGAGTTGGAGCGGCTGACCAGTATTTATAAAGGAGGATGAATGGGAA Gene GeneID:538849|DNAJB14:NM_001076131:17_cdna Constitutive 0 NULL GeneID:538849 6 GENE DNAJB14 MGC142696 DnaJ (Hsp40) homolog, subfamily B, member 14 EMBV3_19909 CCCTGGGCAGCGGGAGCTGCTGTAGAGATTATCCTCAAAGCTACCAGTGCTAATGAACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13444 AGAGGTCTTCTGGAATCTGAGACTGGGCCACGTGAGCTTTCTGCTGAGTTTGGTTTTCGA Gene GeneID:100297644|LOC100297644:XM_002687813:99_cdna Constitutive 0 NULL GeneID:100297644 5 GENE LOC100297644 NULL hypothetical protein LOC100297644 EMBV3_33922 CATCTGTGACATGGTGGTATATTTTGTATCAGTGGTGCTGGGTGGTGGTTCCCTTGGTGC Gene GeneID:788068|LOC788068:XM_002688696:163_cdna Constitutive 0 NULL GeneID:788068 7 GENE LOC788068 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_31695 AGAACCAGGGTTACACCCACTTCTGCCGTGGTGGCCACTTCCAGTACACGCTGCCCGTAT Gene GeneID:616332|LOC616332:NM_001101255:119_cdna Constitutive 0 NULL GeneID:616332 29 GENE LOC616332 NULL hypothetical LOC616332 EMBV3_23388 GCTGCCCTAAGCAATGTTCAAACCACCAGGCAGCCACTCTCATCTCCCATGCTAATAAGC Gene BVV0102_064461 + 0 NULL GK000006.2:109372114-109575312 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204176 TCONS_00204179 TCONS_00204178 TCONS_00206250 2 XLOC_124363 XLOC_124864 Coding TCONS_00206250 XLOC_124864 NonCoding NonCoding - 6:109372280-109379981 - TSS153824 7486 6 TCONS_00206250_4 121 0.893801763291478 2 0.0280519480519481 9.72797389219403e-05 0.000129205740257167 0.00017870404598217 9.48541275843996e-05 0.000112583035728909 0.000191869970722643 0.000213465653633747 3.17014417041758e-05 4.87449072097309e-09 0.000137895495970363 2.09055422931325e-06 1.35371541168468e-05 8.41917996418707e-16 4.53931008844984e-75 1.68804866766182e-06 0.00124006906572388 0.000250181461485487 0.00147673210836587 0.000234347596363056 0.000391543961861836 0.000106694600407285 0.000298930104492155 8.0592775195702e-05 0.00023268917090012 6.69407665132067e-09 0.000162842245573867 0.000107532688539055 7.51370634747864e-05 3.81094523089908e-05 3.05857690827426e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1128 76.54 0.203980764092974 0 noncoding 0 0 0 0 -0.167773128855545 0.543603150397408 0.00934611232145328 0.846386164542311 AGACTGGTTAAATTCAGCTACATTAAAAAAAAATCTACATGGCAGAAAACAATGTAAGCAAAATCAGAAGATAAAATTAGGATGTATTTGCAACTCATCATGTACAGCTTGTTTTCTCACTGAATAAAGCGTTCCCACAGTTTAATAAGAAACCCATAAACTAACAGAAAAATGAGCAAAGGGTATGGAATACAATTCTCAGAAAAGGATAAACAACAAATACTTTAACACATGGAAAATGCTTGGTCTCACTCCTAAGAGAAACATCAGTTACAACTGTAAGTGACGTTCTCACGGGGCAAAGATCCAAACATTCATGAGGTGAGAACCCAGTCACAGCCAGCATCTGGCTGGTAGAACACTGAAGGTATGCCCAATACCCCCACACACGCCCCCACACTCCCACGCACACGTGCATGCACTCATGCACACTCACCCCACAGGCATGCACATGCACCGCACACATGCACATATCCACGCACACGCACCCCCCACACGCATGCACATGCACCCCACACATGCACACCCATCCCACACATGCACACCCATGCACACCCATCCCACACATACACACACACATGCACACGCACCCCACACAGGCACATCCATGCACATGCATGCACACACAGGCACATGCATGCACACACAGCTAGTCAGCAAAACCACAAGACTCAATGGATCAAAGCATATGAGGAACCCTAATGAGCTGATCAGCAAGCTGCCAGGCAAGGACTCACATGCCAAGCACAACAGGTGCAGATTTACACAACTGGTCCAGGAAACACACTGAACAAACAAACAGAAACAAATGTGGGGGACGGGAGGATCTTCCAGAGTTGCCACATCATATCACTTAAAAAAAAGAGAGACACAAGAAGAACCAGTAAAGTAGAGCCCACACAAAGGGAGAAAGTGGTCAAGAGAAACTTCTGGAATAAGCCCAGATGTTAAACTTACTAGACAAGTACTTTAAATCAGTTATTGTATGTTCATGTCTAAAGAATTAAATTATAAGAATGATGTCTTACCAATAGAGTATCAATAACAAGAAACAAATTAAGGAAGAAAACAAAACAGACTTTTTCTGGACTGAAAAAGTACAACCACTAAAATGGAAAGCTCACTAGAGCAACTCAACACCAGACTGTAGTTGGCAAAAGAAAGAATCTAGGCCCCAAAGATAGGTCAACAGGTCCAGTCTGAGAAACAGAAAAAAGAATGAAGAAAAAGAGGCCTGCGAGGCCAGTGTGCGCATGTTATGGGGGTCCTAGAAGAGGAAAGAGGGACGGGCAGAAAGAATCTTCGGAGAAATAATGGCCAAAAACCTTCCAAGTTTAAAGAGAAACCACCTCTACAAGCAAGCAGCTCAGCAGAGCCCCAGCAGCACACGGACGAGTCCCTGACTAGACAGGCTTTAGTTAACAGCAGGATGGTGAAGACGGGGCATCTTGAAAGCAGAGGAAAACCCAGCTCAGTATGTAGAGGCTTCTTTCCCTGAAAGACGGACAGCGGCCTTCTCGCCTGGAACCCTGGAGCCTAGGAAGCAGTGACATGACATAGTCCAAGTGTTGAAAGAAAAAACTGTTACACCAAGGAGTCCATATCCACCAAAACTACTCAAGAACGAAGAAGAAATGAAGACATCCCCAAAGAGACAAGAACAAAGACAGTTCACAGCTGGCAGACTCAGATCCTCAGGGAGACACAGAGTGCTGGTAAAGGCAGCCTCGGGGCCGCTAAGTCAGTGTAAACATGTCTACGGACCTTGTCCTTTCCTCGAGTTAAAGAGCAACTACATAAAGCGATAATCACAAACCTATGTTGATGCGCTGACAACCTGTAAGATGCAACTTGTATGATAAGAACAGTGGAAAGGAGCCAGGAAGAAACAGCTCTCAGGGAGCAGCTCCGTAACCACTGAAATCAGTCGGCGTTAATCCACACTAGAGAGCAGTCAAGTTGTTCAGCGTAATCCTCAATGCAACCACTGAAAAAATTATCTACAAATAATGAAAGGCACAGGGAATTAAAGTATTACAAGGAATTAAACAGTTATTTAACACACATGAAATCAGTAACAGAGGAAGAAAGGTTTTAAGAGACATGTAGAAAAAAAAGAAAGATGGCAGACATAAATCTTACCTCATCAGTAATTATATTAAAGGGAAGTAGACTAAACATTCCACTCAAGCAACAGAGTCGGTAGAACGGACCAAACACATGCCATCCATTAGAAAGACTTGAGATTCAGAGACGGCGAGAGGGAAGGGCTGGAGAAGGCTGTGTCACGCGAACAAGAAGGTGCACTCACGTCGCACAAGAGAGACGTCAGGCAAACGCTGTCACTAGAGACAGAGCAGGCTGCGCTCTGAGATAAAAGGTCAATCCCTCAGGAAGAAATACCGGATATAAACATATATGCACTTAGCAACAAAGCCCTAAAGTGTACGAAGCAAAAACAGACAGAAGAGGGAGAAACAGATAATGTTAATAGTTGGAGATTTCAATACCCTACTTTCAATAAGGAATGTAACAGCTGCGGTAAAGATCAATAGGAAAAGAAAACCTGAGCAGCACGAGGCACCAAGCAGACCTGCAGACTCCATGGAACAGCCACCACCAGCAGAACACGGAGCCGCACGTAACTCTCCAGGACAGACCACGCGCCTCAAATTCTGAAGGACTGAACCGCACAAGACGTGCTCTTCGCTCAGTGAAATTAGAAATCAAGTGCCGGGAGGAACTCAGGAGCACGTGGACATTAAGCAACAAGCTCCTCAATAAACGACGGGCAGAAGAAGAAGTCACGAGAGAGGCTAGAAAATGCTCTAAGAATAAACAAACATGAATACACAATACGCTAAAATGTGCAGGACGAAGCTGAATCAGTGCTTAGACGGAAATTTATGCCCATAAATGTCTACATTACAAAGCAGACCTCAAGACAATAAGCTGAACTTGCACTGAAGGGAGTATGACAAAACTGAAAATCACACATGCAAGCAACCCAAGGAAATCAAAGTCAGAGTGGAAACCAACCAAGCAAAATGACAAATAATAGAGGACAACTTCAAACAGATCAATAAAATTGATAATTCTTTAGCTAGACCAACCAAGAAAATAGAGAAGACTCAAATTTCTACAGTCAGGAATGACACAGGAGACGGGACAACCAGCCTTGTTCTTCTTGTTCCGTCACCAAGTTGTGTCCAACTCTAGGCGACCCCATGGACTGCAGCACGCCAGGCTCCCCTATCCCTCCCCATCTCCCGGAGTTTGCCCAAGTTCATGTCCATTGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCTCTCCCAGCATCAGGGTCTTTTCCAGTGAGTCCCTTTGCATCAGGTGGCCAAAGTATTGGAACTTCAGCTTCAGCATCAGTCCTTCCAATGAGGATTCAGGGTTGATTTGAAGATTGACTGGTTGGATCTCCTTGCTGTCCAAGGGGCTCTCAAGAGTCTTCTCCAAGACCACAGTTCAAAAGCATCAATTCTTCAGTGCTCTGCCTTCGTTATGGTTCAGCTTTCACAATCGTCCGTGACCACTGGGAAGACCATAGCCTTGACTGTGGAATCTCTGTCAGCAAAGTGGCGCCTCCGCTTTCTAACACACTGTCTAGGTCCGTCACAGCTTTCCTACCAAGAGGCAATCGCCTTCTGCTTTCACGGCTGCGGTGGCCTGAGAGCCCAAGGAGAGGGGGTTTGCCACTGCTTCCCCTCTTCCCCTTCTATCTGCCATGAAGAGATGGGACCGGATGCCATGATCACATTTTTCTTAATGTTTAGTTTTAAGCTGGCTTTTTCACTCTCCTCCTTCAAGAGGTTCTTTAGTTCCTCTCTGCTTTCTGCCATTTGAGTGGTACCACCTGCAAATCTGAGGTTGTTGGTATCTCTCCCAGCAGTCTTGATTCCAGCTTGCGCTCCATCCACGTAGCATTTCTTGTGATGTGCTCTGCACATGTTCAGCAGGGTGGCAGGAAACAGCCTCGGCTACTCCTTTCTCAGTTCTGAACCAGTCCATTGTTCCATACAAGGCTCTAACTGTTGCTTCCTGACTGGCATACGGGTTTCTCAGGAGACAAGTAAGATGGTCTGGTATTGTCATCTCTTTTAAGAGTTTTTCACAGTTGTTATGATCCACATTGTCAAAGGCTTTGGCGTAATCAATGAAACAGAGGTAGATTTTTTTTTTTTTGGAACGCCTTTGCTTTCTGTATGATCTAGCAAATGCTGGCAATTTGAACTCTGGTTCCTCTGCCTTTTCTAAACCCAGCTTGGACATCTGGAAGTTCTCAGTTCACGTACTGCTGAAGCCTGGCATGAAGAATTCTGAGCACTAGCTTATTAGCATGGGAGATGAGAGTGGCTGCCTGGTGGTTTGAACATTGCTTAGGGCAGCCCTTCTTGGGAACTGGGGTGAGGATTGACCTTTTCCAGTCCTGTGGCCACTGCTGGGTTTTCAAGTCTGCTGCCATGCTGAGGTAGCACTTTGACAGCATCATCTTTGGGATCTTACACAGCTCTGCTGGAATCCATCACCCCCACTAGGTTTGCTGGCAGCAGTGCTTCCTACGGCCCACTTGACTTCACAGCCCAGAATGTCTGGCTCTGGGTGAGTGAGCACACCACCGTGGTTATCTGGGTCATGAAGACCTTTTTTAGTACAGTTCTGTTTATTCTTTCCATCTCTTCTGCTTCTATGAGGTCTTTACTGTTTCTGTCCTTTATTGTGCCCATCTTTGGCTGAAATGTTCCTTTGCTATTTCCAATTTTCTTGAAGAGATCTCTAGTCTATCAGCCTTACGGAAACATAAATGATTATAAAGGAATACTATGAACTGTATGTATGACCTAGATAAGACGGGCAGATTTCTAGAAATATACAAACGACTGAACTGACCATGTGGGATTTATCCCATGAATGCAAGGGTGGTTCAATATATGAAAAGCAGTTAATGTAATCCACCATATATCAACAGAATAAAGGACAGAAACCACACAATCGTTTCAATAGATGTAGAAAGTGCATCTGACAAAAATTCAGCTCCCTTCATGACCAAACAAACACTCAGCAAACTAGGAACATAAGGGGACATCCTCAGCCTGCTGCCCAGCAGTACAAAGCGCCCAGCCACCACCACACTCTGGGAAGAGACCAAAAGCTCTTCACCTCAGATCAGGGACGAGAATAGGATGTCTCTTCTCTCCAGTTCTCTCTGGCTCTGCTCTGACGCTCCAGCCAGGGCAACCAGACAAGACAAAGAGGTAAAAGGAATCCAAACTGCAAAGGAAGAAACACAACTTTCTCTTGCAGGTGACGTGACATTGTGTACAAAAATTCCTGAGGAATCTACACACACATACACAGCCCTATTAGAACTAATAAGTGAGATGACCACTTTCAGGATATACGATCAATGTATACAATCAGCTGTAACATCTAGGTATTAATAGCGAACAATCCAAAACTGAAATTCAGAGAACATTTATAACAGCACCAAACAGAACGAACATTTAAGAATAAATTTAACAAACGCAGATCTTGGTATACAAAAAACTACAACTGTGAAAATACAAACAAAACCTAAGTACATGGAAAGATGCTATAAGTTCACTAAGTATAAAATTTAATATTAAGATGACATTGTTTGACCTCTAACATCACAGGGGTTGGGGGTACCTACCGCCCCTGCATCTGTGGTTCTGCCTCCAAGGATTCACCCAACCACAGCTCATGTGGGACCCTAAAATATTTACTGTTGAAAAAAATCCTCGCGTAAGAGTCAACACAATCAGTAAAATCTCAGATAGCTTTTTATTTCTTGGCAGAAATTGACAAGCTCATCCTAAAGTTTATTTGGAAATGTAAAAGGCCCAGAATGGCGAAAACAACATTTAAAAAGAACAAAGTTGGAGGCTTTCAAAACTTCCCACAAGGCTACATCAGTCAAGACTGCGCAGTAGCAGCACAAGGTCAGGGAACAGAAGGGAGACTCCAGAAATAAATTCAGGCGTTTAGTGTCAACTTACAGTCAATAAAGGTGCCAAGACAATTCAATGGGAGAAAGAACAATCTTTTCAATAAATGATGCTGAGACAACTGGATATCCACACAAACGATGCACAGACAGAAATTAACTCAAAACAGTTGATCCACACCAAAGACCTAAGTTTAAGAGCAAGATCATAAAACTCCTAGAAGAAAACATGACTAGACTTGGGATTAAACAACCGTTGCTTAAATACGACGTGGAAAGCACAGGTGGCAAAATGAAAACCAGACGCGCCGGACATCCAAGGCCACGCGCTCGCGTTTCAGAAAACACGGCGAGACCAGACGCACCAGACATCCAAGGCCGCGGCGCTTGCGTTTCAGAAAACACGGCGAGACCAGACCAGACGCGCCGGACATCCAAGGCCACGCGCTCGCGTTTCAGAAAACACGGCGAGAAGGGGAAAACACAGGATGGGGGAGAGTGATCGCAAATCCCATGAGGGTCTAGTGTCCAGAACACACAAAGCGCTCTTACAACTCAAAACAGCAACTCAACTGAAAACGGGCAAAAGATCTAGATGTTTCTCCAAAGAAGATAAACAATGACCAATAAGCACAGGAAAAGATGTTCAACACAGGTGGTCGCGTGGCATCATGACTCAATGGACATGAGTCTGAGCAAACTCCAGGAGATAGCGACGGACAGGGAGGCCTGGCACGATGCAGTCCCTGGGGTCCCAGAGTTGGGCGAGACTTAGCAACTGAACAACAAGATGTTCACCATCATTCATCATTAGCAAAGGGCAAGTCAAAACCACAATGAGATGCCACTTCACACCCACTAAGATGGCTAAAATTACAAAGACCGACGACAGGTGTGGCAAGAACAGAGAAACGAGCACCCGGATGCCCTGGCAGGGATGTAAGTGGTGCAGCTGCTTCGGAAAACGTTTCAGCGGTTCATCAGTAAGTTAAACACAGAGTTACCACACAACCCATCCATTTCATTTCTAGGCATAAACCCAAAAGGAATGAAAATATACGCCCATGCAAAAACTTGCACACAAACGGTCATGACAGTATCCGTCATCCCAAAGTGCAAACCATCCACATGTCCGCGATGCAGGGTAAGCGTGGTCTGCTCACACAGCGGAGCGCCGTCTGGACTGAGAGGGGGATGCGCTGACAGCACCAGGGGGGCGGCCTTCAGGGTGCCGCGCACGCCGAAGCGGCCCGGTGGCGCCACGCTCAGGCAGCGCCCAGCAGGCGGACCCGGAGAGGACCGGAGAAGGCTGGGGCAGGGCGGGGCTGCACTCGTCCTGGGGGTTGAGCAACCCTGAGCCGTGCCACAAAGCGCCCAGGCCGTGCAAGACGCCCCCTGGTGGCCAGGCTGCCACGTTCACCCCAGGCGACCCGGCAGGCGGGCCCTAAGC TCONS_00204178 r 5' 0 TCONS_00204178 r 5' 0 EMBV3_05065 TCAGTCATGTTCCCAGCATCTTCTGGGGCTTCACGGAGCATTTATGGGAGATGGGGAGTC Gene GeneID:516433|HES2:XM_002694110:430_cdna Constitutive 0 NULL GeneID:516433 16 GENE HES2 MGC166198 hairy and enhancer of split 2 (Drosophila) EMBV3_37387 GTGTTTAATCGACTGGACAGTTCACCTATACTGTGTAGGAAATTACCTCCTTAATTGCCC Gene BVV0102_073327 + 0 NULL GK000008.2:84615688-84629256 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228481 TCONS_00228475 TCONS_00228485 TCONS_00228479 TCONS_00228478 TCONS_00228484 TCONS_00228477 TCONS_00228482 TCONS_00228480 TCONS_00228476 TCONS_00228483 1 XLOC_138502 Coding TCONS_00228475 XLOC_138502 Coding Coding CDC14B 8:84624495-84679220 j TSS170333 6145 1 TCONS_00228475_3 390 0.0546786004882018 13 0.887946787515532 0.00120896235408451 0.000421531944796024 0.00115002250360678 0.000727217941206494 0.00029860096149475 0.000175040307349516 0.000566647091976834 1.81379951541084e-07 0.000740492936304587 0.00022134164466219 0.000338991905691373 7.34944369621478e-05 0.000146196131090536 7.33106757637059e-05 8.4898132613224e-05 0.006701880524749 0.00203886915609956 6.5297528973856e-07 0.000543757015105243 0.00113935565956995 7.63788474992008e-13 0.00207257275098025 0.00146134833682808 0.00337453314509962 0.00173863888153326 6.18923873393657e-05 0.00084539236879889 8.52458680306257e-05 5.49384948341139e-05 0.000113303459670968 XM_005210403.1 CDC14B PREDICTED: Bos taurus CDC14 cell division cycle 14 homolog B (S. cerevisiae) (CDC14B), transcript variant X4, mRNA. 0.0 6592 100.00 0.594629780309194 XM_005252286.1 CDC14B PREDICTED: Homo sapiens cell division cycle 14B (CDC14B), 0.0 3287 79.35 0.620992676973149 TCONS_00228475_3 sp|Q6PFY9|CC14B_MOUSE CC14B_MOUSE Dual specificity protein phosphatase CDC14B; 0.0 728 85.38 0.997435897435897 4 coding 0 0 0 0 0.0194822255265137 0.886430650565337 0.0403205839853735 0.514042351548543 CTTTGGTGGCCGAGGTGATCAGAGCTTCTACGCAGATTTTGGACCACTCAATCTAGCAATGGTTTACAGATACTGCTGCAAGATAAATAAGAAATTAAAGTCCATTACAATGATGAGGAAGAAAATTATACATTTTACTGGCCCTGATCAGAGAAAACAAGCAAATGCTGCTTTCCTTGTTGGATGTTATATGGTTATATATTTGGGGAAAACACCAGAAGACGCATATAGAATATTAATGTTTGGAGATGCAACCTATATTCCTTTCAGAGATGCTGCCTATGGAAGTTGCAATTTCTTCATTACACTTCTTGACTGTTTTTATGCAGTAAAGAAGGCAATGCAGTATGGCTTCTTTAATTTCAACTCATTTAACCTGGATGAATATGAATACTATGAAAAAGCAGAAAATGGAGATTTAAATTGGATAATACCAGACCGATTTCTTGCCTTCTGTGGACCTCATTCAAGAACCAGACTTGAAAGTGGTTACCATCAGCATTCTCCTGAGGCTTATATTCCATATTTTAAGAATCACAACGTTACTACAGTTATTCGTCTGAATAAAAGGATGTATGATGCCAAACGCTTTACAAATGCTGGTTTCGATCACTATGATCTTTTCTTTGCGGATGGCAGCACCCCTACTGATGCCATCGTTAAAGAATTTCTGGATATTTGTGAAAATGCAGAGGGTGCCATTGCAGTACACTGTAAAGCTGGCCTTGGACGAACAGGCACTCTGATAGCCTGCTACATCATGAAGCATTACAGGATGACAGCAACCGAGACCATTGCTTGGGTCAGAATCTGCAGACCTGGCTCGGTGATTGGACCACAGCAGCAATTTTTGATGATGAAACAGGCAAGCCTCTGGATAGAAGGTGACTATTTCCGTCAAAAGTTGAGGGGTCAGGAGAATGGAAAACACAGAGCGGCTGTCTCAAAACTCCTTTTGGCTGTGGATGACATTTCAATCAATGGGGTCGAGAATCAAGACAAGCAAGAACCTGAACTGTACAGTGATGATGACGAAATCAGTGGAGTGACACAAGGGGATAGACTTCGGGCCCTGAAAAGCAGAAGACAGTCAAAAACAAACGCTCTTCCTCTCACATGTTCCCTAGCTGTGCTGACCTCTGCACTGTGTAGTATTGTCATCTGGTGGATTGTTTGTGACTACATTCTCCCCATCCTGCTATTCTGTCTCGATGGTCTAAGAACACAGTAGCCATCAGGACCTTTGACAGATAGCTGCTGTTCCCTCCATTTCAAGGACTAAAACAGTCTTGCGTTAAGTAAAAACCTGTGACCAGAACTGAAGGAAGACTCTAGGAACAGAAAACTACAACAGGACTTTAGCACAATTTATTTGGGAAAAAAAAAAATTGCAAAAGCCTTAGCTGCTTTCCACCTAACAAGTTTATTCAATGAAGAAAATGTCCACTGGAATTTAAATAACTACATGAGCTTGGGTGCAAGTGAATGACTTGAAGAGGGCCCAACTCTCCTATAAAAATGTCTTGAACACAAAAAGCTGTTGTAAATTAGTCTCAGGTGTAAATATCAAAGCCCTCTGTTATCAGGAGAGCTGACTAGTCTGTGTGGTGCACGTATGTCCCTGTGATGGCAATCATTTTAGCTGCTGGCCTTCAGAAGAATTGAAGATCTGATGGAGGTTTTTTACTTATTTATTTGCTGTTCACCCTGTGTCAAAATTTATAAAGCTAAAACAAGCATTACTGAAATGGTACTTTCTGTGATTTGATACTATTTGGTTTAATCATCTTCACTTTAATATTTGTAATACTGTTGTAATGTTAACTCTGTTAAGTACCCAAGCTGCTTGTCTCCCACCAAAGAGTGCTTTATTAACCAGAACCTGTGAAAACCACATTTAAAGACTGTTGCGTGCTGTAATACAAAGTGGTACTTTGGTACCCTAACCCTATCGAGAGAGTGTTAGTAGCAGCTTTAGAAGACTCAGGAAGAGAGGCTAGCTTCAGAGTTGGAAAATTGTTGTAAGTCGTTCTTTTCTGTGTCACTTTGAGTCTGAAGAATGTCAAGGCTGCCCACTATTTGGTTACCCAGTCATGCAAATTAAAATCACACTTCCACGCAGGAAAAACCCCCGCACTGTTGGTGTTTCCCCTGGAAACAGTGATCCCAAATAATGACGACTTTTTTAAAAAGTTATTTTGTCAGGGTCTTTCTCTGTAGCATTGTGAATTTTTGTTGTTGTGTTAATGGCCTCAGGCCTTTTGGTTTCCACTCATGGTTATTTGCATCTAGATTTCCTTATTTGTAAATAAGAAACTCACTGTTGCCTTCGGTTAGGGAATACAACTAATAACTCTTTGCAGAGTGCCTTCTCCCCTCAATCCCACAGAAACACAACAGTCTGTAATGTAAAGCAATCACAAAACAATTTATTTGCTGCTAAAAAGAAATAGGGCCCCAAATAAAAGAATATTTATAATCACCTTGGTTACTTCCATAAGTGAATGATTTAGTTATTGTTAACCAGTGTTTGGCTATCCTAGTTTCGAGAATGAGGAGATATATTGAAAGGCAAAATGCCTTCACATTCTTTACCAGATGAATGCATCAGGTCAGTAGGCAATTCCATTTTTAAAAAGCTGCCTTCTTAATATAGTTACAAAGAATAATGAGTGGTTGGAATAAGCAGATTAAAGTCTGTTAATGTAAAAAGTAATTAGAAGACTGTGGATCTCTTATGGTATCTACTGTCTTGGAGTAAGTTTGCCTAGTTTTGAGGGGAGATGGAAGATGCCGTTGTTTTGATCAAACAAGCAGCTCCTCCTCATTGGGCACCATGTGGTAGGCTGTGCCAGGTTCTAAACATCAGGACCAGACCTCAGAAAAATGGTGGTGTTCTATCCCTGAAAGTTCATAAATACAAAGACCCACTTAGCTGAGGGAAGACAGCTCTTGATGAAGCTTTGAGTGGGAAAAGAAACCTGTTGGCTGTGTTGTTCTGGGAGATACTAAATAGTCAAGCTGTGCCCAGGTATAAAACACTGAATTCTCAGGGCAGCCCTTCTTCCCTTTATACCCTTAAAGGCCATTTCCTACATAACTGATCCCAGCAGTTATGAAAAGCAAACTTCCATCTGAACTGTTCTTGCTCATCGGAACAAGTAAATGCTGTCTCCCTCACAGTGGATAAGCCATCTTATGTTTTGGCCAAGAGTGAAAAATTTGGGCTTCAATGTACTTTTTGTTTTACGAATTGCCTTTTTGTGTGGCTGCTCAAGTTTTCCAGCTATAGTTGCTATCACTGTGGTTCTTTCTAAAAATCCTTGTTTTTGACAGGCTCACTGAAAGTAGTCGTAGCAAACTAGTGATTTGTTAAGAAACATTCCTTGGAACACACAACTTGGGATAGTGCTTCAGATGGATGGTATAGCACGTTGTTAAGGGGGATATTGAGAATCTAGGAAGTCTCTGGGTCTGACTGATGGAAAGTTCTTCCTGCTGTGAATAAAAGACTCTTCCTCCTGTCCCCAGCTGAAACTTCAGCACACCCAAGAATCTTCTCAGAATCTCATTTTTAATTTGTTGTATAAGATCTTGGTATGGAATATGAAATAGGGCATGTCAGATATGGAGAGATTTCTTGAACTTGAGAGCCTTAAACAGCTTTGAAAATACACCAAGAGAGCTCCCATTGGGATAAAAATTAGAAGTGAGTATTTTTAGGTGCCCTTGAAGCTTTCTGGGGACTCAGATCATCAACAGTCAGGGACAGCCCAAAAGATCAGTGTCTGCCAAACTGGGCACCTAGGTGTGTGAACAGACTTGCATTTTGTAATCCTAAAGAAAAACTAGAAATCCCTCTAACCTGTGAATGAAGAGGGGTGGACCCTGAGCAGTGCCTCAATAAAACAAGTAGCCTTACTTGTCAAAATGTAGCTGCATCGAAGTGGCACACTGCTCTTCTGGTCTCCAGAATTTTTCTGTTCTAAACTTGATTCTCTTAGCCTGTCCCCCACCCGCTTGCTTCCCTACCCTCTTCCGCCTCTCACAGGGGTGATTTCTACCTCTTGGGCCCAGACAAGATCTAAAAGAGTTCCCAAGTGTTCTCATGAGGCGATGTGTCTGCCCTTGGAGTGTGAGATGCTTCGGTGAGCTGTTCGGACCATCAGGCGTTCTGGGCCGCGTTATGCAAAGAGCTCCGGGAGTCTTTCCTTTGCTTGACAAATGAGTGTTGCGCTCCTTGGATGTCTGTCAGAAAGTAGCATAGCTGCTTCTCTTCATACATTTTTTAAACTAGTAATTGCATTTTGGAAAGCAAAAGCAACTTTAAAATAGTCTGTTTTAATTCTGCAATAGTTTTCTCCCCTCGAAACTGTTCTGTGAGTCTAGCTGCTGCTCTTTCTTTTCTCCTAAATCTGAGTATTCTCCATGTCCCTACGCGGAAATACTACAGATGTGTTTAATCGACTGGACAGTTCACCTATACTGTGTAGGAAATTACCTCCTTAATTGCCCAGTAGAATTAACTGTCAGCAAATATGTTCATCTGATTATATTACTGCAGTTTTATATCAATGATTTGCAGACTTTTATCTAACCTGCACTCATGTATAGATTATTAAAAGTTTTAAAATGTAACTGATTAATCAATATTTGATCAATCATTGTCTTGATTTTTTTAAGTAAAATGTATATTTCTAATCATATTTTATAAAGCTGAGAGAACTGGTTGAATGAATGTTTATTTTCCTGAAGGTATTTTTAAGATAAAGCTTCATAATGGCCTGTAAACTTTGCATATCTATGTAGTTTGATACATATTGTCACATTTGTGTATTGTAACTGTTTTTATATAAAATGTTGAATAATGGAAGTTGTATAATTATAATCGTATCATTAAAAGTATTAACCAAAGAGCCTTTTGAATTTTTTACTCACTTATCATTCTGAATCATGGTAAGCTGTGGTTAAAGTGTAAAGTGGATATAACCCTCTGCAGTATTAGTTTGCTAGGATGTGGTCTGGGCGGCTTAACAGAAATTTACTTTGTTACAGTTCTAGAGGTTAGAAATCCCAGGGTCAGGGTGTTGTTAGCTGGGTGGTTTCTCTTCCTCTCTTCTGATGCCTCTCTCTGTGTCCTCTAATCCCTGGTGCCCCTCTATCTGTCCTCCATTTCTTATCATATGAATCAGGTTGGATTAAGGTCTATCTTAATGACCTCATTTTAACTTCATTACCTCTTTAAAGGCACTGTCCCCAGATACAGTTCCATTCTGAGGTATTGGTGGAAGGACTTCAACTTAAGAATTTGGGGGGTATACTGTTTAGTCTGTAATGTCTTCCTCAGGATAAGACAGTAAGTAAGTGAGGGGGCTCCTGATATGGACTCACTCTACAGATACCCACTAACCAGCTCAGGCATGTAAAGGTTTGACCCTTCTAAAAACTGCTAAGGAAAAGACACTTGTAAGTCAGACCCTTGGAGCCTCATGGGTCACACACTGTAGCCCCTTCATTTTACCTGCCAAGGTCCGGCTTAAAGTGCTGAGTAAAGGCAGGACCAGTGCTGGAGCACTTCGTATCCCAGTGTATACCCAACAACACCATCCCCAGCTAATTACCTGCCTTCCCTCTTGGTCTCTTGCAGGGCAGAATCCTAAAAAACCTAATTGCCCGCATCATCATGCAGAGGTTATGTCTAGGATGTAGGAACCTGTCCTGTTAAGGGGTGCTGTCCAGTTCCCCAAGAACTTAGCTTTGATTTGTTCTAGGATATGAGTTTTCAAAGTACAAAGTCAAGGGACTGGTCTTCTCATCCAAACTCCTGCACACCACTGCCCTCAAAGAGCAGTTTGTAGGCTTTGCCGTGTCTGCCTGCTCCTCCATGGTTTACCCTGAGTTGTGTGCCCTCCTACTGACCCACTGGAGCTCAGGTGGCATTGGCCAAGCAGCTCAAGATAATGTGAGCGTGAAGGGGGCAGGCTTGGCAGTCGGGCTCTGAGGCTTGGCCCTGGATGAAACTAGAGGACGTGCCTGCTTCTCTTGGGAGCAGCCGTGTCTTCCAGGGCTGTGCAGTGTGAGCACCCAGCCCTCTGAGCCCCTAGCCCTGTAGATTCTTGCTTGCTTTCTCTGTTGTTGACCACTG EMBV3_32961 CAGAAATGCTATTGTCCTCTCCTGCTGGGCCACTCCCTCCGCCCTATGTTGGTGAAAAAA Gene BVV0102_259223 + 0 NULL GK000030.2:1027957-1305734 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243545 TCONS_00243546 TCONS_00243543 TCONS_00243548 TCONS_00243544 1 XLOC_150191 NonCoding TCONS_00243543 XLOC_150191 NonCoding NonCoding LOC100847612 X:1144543-1149201 = TSS183210 2024 2 TCONS_00243543_1 68 0.0548418972332016 3 0.566029632810822 0.000712846785547386 0.000300130551033523 0.000357618853570486 0.000156849550982121 3.61612967252174e-05 5.41311930873374e-05 1.31681467191493e-46 3.74695703296804e-51 5.77050926698701e-25 4.55225352677994e-07 9.68961098058018e-05 1.58857809324272e-05 2.68795865465727e-46 1.92001754567454e-32 8.26031716473323e-05 0.000297138349556818 5.05698588955922e-11 0.000152109485033851 0.000605036771650856 0.000438481990542061 0.000158320584799977 7.48248697309079e-05 1.44547260244758e-158 8.49098099019351e-05 0.000207753985667947 0.000230927306537863 0.000109222565036841 3.66393652169412e-118 2.27881962349192e-06 5.34244184227171e-05 XR_232439.1 LOC100847612 PREDICTED: Bos taurus uncharacterized LOC100847612 (LOC100847612), 0.0 3651 100.00 0.999505928853755 0 noncoding TGCGTCTCCGAGGAGACGCCCACGACGGTGGGCCGGGGCGGCGAGTGGGGAATGGGGTCGTATTGGCGGGGTAACGCGGGCGACGCTTTACGGCAATGGTGAGCAGGGTCGCAGTCGAACCTCGCCAGCTATCGCGCGAAGCTCAGAGAGAACCGGTTTTTTTCCCGCTGGAGCGTGGCCTCAGCCACGTTGCTCCACTCAGTCTCCTTTGTGTCCTTTCCCTGGGGCAACGCGGGGTGACGCGGGGCCGGGACCAGCACCCCTTCTGGCCGGAGGGACCCTCCCCATCCTCTAACGTCTGAGCAGCCTGTACCCTGCGTGCAAGGCCTTCCCCAGCAGGATCCAGAGGCAGGACCAGGAGTTCAGTTCACTTCAGTCGCTCTTTGAGACCCCATGAACTGTAGCACACCAGGCCTCCCTGTCCATCACCAACTCCTGGAGACTGCCCAAACTTATGTCCATCGAGCTGGTCGTGGTAAGATAATCAAAGGGCATGATCAACAGCTCATATATTGCCTTGCTGTGGACTCAGAGTGCAAGAACAGACGAAGACCAGACACTGACTTTACATTTTTGATAGGTAGGTAATACAGCCCTCAGTTGCACTTTGATTCTTTGACCCACTTCTGTACAGTAGGCTTCTCTCTCAAGGAACAACTCTCACAGAAATTCCTTGCGTCAGTGTCTGGTACTAGCACGTTCAGGTATACTGAATTGCTACAGTTGTTCACCGTAATGATCAGAAGAGTTCTGCCTGGGGGATGCAAATATCAACAACCTTGATCCAAGAACCTTGAATTCAGTTTAAACTCAAACCCCAGAAAGACCAGTATTTTACTGGAGCCAATTTCACAGCTCTGATAGGTGTGGAATAGTACTCCCAGGTGTACTTTGTGTTTTACTCCTTTGTCTTCTGCAAATATTACTTTCAGAACTGTTTTAATCGAGTGTATACTGGTGCCATGGAGGTGTGTTCTTAATGCTAAGACTGAGCAAAGGAAGCGTTATTTCAGTAACCTGAGACCTCTTAAACCTATCAAACCAGCCTTCCTGCATAAGGGCAAGGATCCCCAGGCAAGAGGCTCTGGGGCAGGAGCTTCAGCACCTTGTTCCTGAACATGGCCACTGCCAACACCACGCCCCCGAGAGCCTGGCAGCCAGGGGCTCCTTGGTGGGGAAGCCAGGCCCCGGAACACCACTACCTGTTGCTCCCACACCTGCTCTGGTGAGGTGGCAGGCCGCCAGGTTCGCCCAGGATCTTCGGAGTGCTGGAAACCCTCACTTCCTCCCGTCACAGGCCTTCCCCTGGCAGGATCCACAGGAAGGGCCTGCATGCCATGCTGAAAACGCTTCCCCTTCATGGAACTGATTTCCCAGAAATGCTATTGCCCTCTCCTGCTGGGCCACTCCCTCCGCCCTATGTTGGTGAAAAAAGGCTCTGGTTGTGCCCAAGCGCCTTTTAAGTGCTGTAACGGGGCGTCACTCTAATGGATTGTTGAAGAAAGAGGTGTCTCCTCCTTAGGGGGCTTCTCCTTGGCAGTAAGGTCATACCTTTGTGGATATCTAAAGCACCCTGTCCATCTGTAGTCCATGTTCATAGCAATCTAGGAGATTCTGAGTCCACATGGCCTGGACCCTACGTTTTCTGGCGATCACTATGTGATATGTTCTGTCAGGTTATTATTGATCAAGTTTGAAGCCAGAATTCCCTTGATGCTGTAATAATTAGGCTTTGGTTGAAGGCCTTTGCCACTTGGAATAAATCCAGGTTGTAACCACACATACAAAGTGTGCACTTGTGTTATATGAATCCTTTTGGAATAGGTGTAGAGATGCTGTAACTATCATCACTATAAATGTCTGCATAGTTTTAGGAAATTTTTAAATATACTATATATTCAATAAGTGCCCATTTTTACCTCCCGAGGTTTCTGACAGTCTTAATTTCAAAGAGGTGTTGGTTATTTTTACGAAAGTACCCCTGTGGAGGTGTGGGTGGAGGACTCTTGGTGGTAGTCGTAGCA EMBV3_02528 CTTCATATTTACTCCAGAAGGCAAGATTGGAGGGTCAGAACTCAGGAATGGCTGGTGGGC Gene BVT0101_079795 + 0 NULL GK000011.2:67781633-67802266 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16890 TTTGATGCCATATACAAGAACACAGTGGAAAGACTGAGGAGGCGGGAAGAAGTCTTGAAG Gene GeneID:530031|GIMAP7:NM_001046308:694_cdna Constitutive 0 NULL GeneID:530031 4 GENE GIMAP7 MGC137405 GTPase, IMAP family member 7 EMBV3_17599 GATACCCCATCAAGGCACCCAAGCTGCCAGGGGTTGGCCCCCAGGCTGCAGCAGCAGCGG Variant GeneID:280781|ELN:NM_175772:20_cdna 678^779 3 EMBV3_08261 GeneID:280781 25 GENE ELN MGC148808 elastin EMBV3_15537 GCCACTCCCGAAAACGGGCCCGCAAGACAGATTAAATATAAGACACCTCAACCTGTAGGA Variant GeneID:504256|CLGN:NM_001034205:11_cdna 112^252 2 EMBV3_20313 GeneID:504256 17 GENE CLGN MGC127998 calmegin EMBV3_34950 GGCGGTCATCTACCATTAAATTGTCCCAAGAATGGAAACAGGGTATTATCCGAAGATCTG Gene BVT0102_209816 - 1 EMBV3_19735 GK000023.2:45111457-45119090 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135305 1 XLOC_081686 NonCoding TCONS_00135305 XLOC_081686 NonCoding NonCoding - 23:45111839-45114305 - TSS100695 2466 3 TCONS_00135305_4 78 1 0 9.3794450662053e-05 0.00023226237073522 0.000431553385123003 5.05118954075997e-05 6.1184084033387e-59 1.33981372043081e-33 0 0 0.000310357558967694 4.17122431389077e-05 1.85659809599933e-06 1.4499953568456e-06 2.32707326233284e-06 0 0 0 0 0 3.98105593373766e-05 5.8324672755258e-05 1.7341762164346e-05 0 0 1.99756871287417e-155 0.000342771216098408 0.000151423208091662 1.63041278352739e-05 7.98655140719778e-101 0 0 XM_005249200.1 ELOVL2 PREDICTED: Homo sapiens ELOVL fatty acid elongase 2 (ELOVL2), 6e-129 466 68.84 0.529197080291971 0 noncoding 0 0 0 0 -0.0958304800766475 0.643409429883474 0.00212905293767676 0.96252061220402 GAACCGAATAAAAGGAATCATGACATACTTTAGTGTAAAAATCAATTTATTATACAACAATCATACAGATGCTTTTTATCTACAAGGAAAAAATGGCTTCTCCTGCCTCCCTGGCCACCTCAGTCATGATACTATGTTCTTAAGATATAAGTGTTTTCCAAGGAAAATCAAAAAAGTGCTATCCTTATTTTCTAAATAAGGAAGTCCCCAGAAACATAAAATGAAATGGAAATACTGGAAAGAACTAGACTGGTTTCTTACACAAGAAATGAAGTTCTGTCCATCATAGTAACCTTTTGCCTTAAAAATACCTCTCCAATGTGGGGAGGACTTTCCCCTCAGTATGTCTAAATAGTTTAGTATGTAATTTTGATGGGTTGAGATTTCTGTATTTAATTCCAGTAAGTGAACATTCTTTTGTTTGAAAAATTGGAATAAACATATGCTTACCATACTCATATAACTGTTTTCATTCTTATGAGTGAGGAGAAATTTATTTGGGGGGAAAACTTCCCTTTTTTTTTCTAACAAATTATACAGAACTTTTTTTTAAAACAGCTTTGCTTTAGGAAAATCACATTAAAAGTAAACATTTTGTTTAAAATTGTAACACTTAATAACAGGTGAAGATAGTTACCTGATTCAGTTTTTGTGACTAAGACTTCATAACCCTGTATTTTTTTTTTAACCAGCCCTTAAATGGTTTAAGGCTATAAAGTGTTTCATGAAGCTTCCCTAGGATTACAGATCAAGTCAGAAGTAAGCATCCTGAAGCCTCTATCCAAATCGAGCTGGAGAGTGTAAACTAACCGAGCTTCCCCTTTGATCAGCGGTTTCCAGCTGTCTGGGTCTGCCTTGGCTGAAGGACACCTCTGTCCTTGCCGTGTGGGGATGGAGCCCACGGGAGCCTCCGGAACTGCAGCTGCGAGGCTGAGTGCAGAGCCGGGGCCTGATGACTGAGGGGAAGCTGGAGACAGCAGCTGACCCGTGACCTCTGCCTTCTGAGCCTCATTTTTACCTGCGGTGAGTGCATTTTGATAACATTGTAGCTCCCCTCTGAGACCTAAAACGGCACCAAAGTCTAGCTCCTCCGAGGGGCTTCCTCCCCAGTCCGTCGAGGACTTTGTTACGGGAGCAGGGAGAGTCATACTCAAAGCGAGCCCTTGTTTTAAAGTGAGTTTCTGGGAGGACACAGTACTTAGAGCTGTGCAGGCATGATGTGATGGAAGGAGGGGGTTGAGCACCCTAGAACAAGACAGCTTTAGGAGACTAGAAAGACCCAAGAGAAAGCGGACATCAGACGGAAGATGTCTGTTCCGGAGAAATGGGTCCGCTGGCAGAGGAGGGGCTGGAGGGCATGATGCCCTCGCCGTGAAGGCTGGTAAGGTCAGTTGCCTTTCAGGGCAGCGGAACCCCGAGGGGCGTTTACAAGAAACAGACGTTGGAAGTGTCAGTATGCCCAGTGTCAGTGTACACGTCAGTACCACAGTCCGTGTTTTTGTTTTCCCATTAAAAAAATTTTTTTTCAAACGGAAGCTCAGAAAACAGAAATGGTCCCCAAAGGACAAAGTCCTTTTGTGCTGTAATGTGTTGGGGCATTTAAGCCTCTGATGTCAATGTTACGACCTAAAAACTTCTTAAAGTAAGGCAGGAAAGCAGAGAGAGTGTCAAAGTGCGCAAATCTCGTTTTTACAGGGTATGAATTATTTTATAGGGTGTAAATCTGTATCAGATCTTCGGATAATACCCTGTTTCCATTCTTGGGACAATTTAATGGTAGATGACCGCCCTGCCCTTGGGGAGAAAGGAGTGGTCCCTCTCGCCTTCCTCTGTGTGCTTCTCTGCGGGGCTCGGGTTACCCGAGCAGGGCAAGGGTGTGCTGGGCTTGCCAAACCGGCGCTTTTTACTGCAGGCAGTGCTGGAACCTTTCCATAGCCCTCTCTTTCTTCCTATTTTCAAAAACCTAACCTGTAAAGACAAACAGCAGCTATTTGGGGATAATATTCTCAAGTAGGCTCTTAAGAAATCGTTGACAAGGTCAGTATCTATTTTTCCCTCGATGCTGTATTAATTCTAACTTACAGATACTCCAGTGACAGATCATTCTAAGGGCCCAGTGATGCAGATTAGTGGGCTCGAGTCCTTGTTCAGAGAGGAGATAGGCAGCCAAATTCAGATCCTACTTTTAAAATGAACACTGTTATCCTAACCCAGGGTACCTTAACATAGGATGTAGATGTGAATGCATGAATAACTAAGGAAACCCAGTTAAAACAGAAGAACTAGGCCTATCCAGAGCCCTTGTGCTATGAGGGTTTGGGAGATTTTTCTTCAAAATAAAAAAAAAGGAATAGAAAACTATTACCATGTCACTAAGTTGAGAATTAGGAGTAATTGTGGGAATCTGAGATTCTGGAGACAAAACAGACTTGAGAGAGAAAAGGGGTTGCTGGGTTGTCCATCTAT TCONS_00133541 TCONS_00133543 r 3' 384 TCONS_00133541 TCONS_00133543 r 3' 2849 EMBV3_42357 TGGGGGTGAGGTGGGGGTAGTATTATGTAGAGAACTGTTGTTCAGGGGGGTCTGCCACTT Gene GeneID:532600|TMEM165:XM_002688258:176_cdna Constitutive 0 NULL GeneID:532600 6 GENE TMEM165 NULL transmembrane protein 165 EMBV3_04837 CATAAAATCATTCTGTTTGTGACTTTCCCCCCAATCTTTTGGTGTGTTTGGTTTCACTTT Gene GeneID:515895|C27H8orf40:NM_001098040:68_cdna Constitutive 1 NULL GeneID:515895 27 GENE C27H8orf40 C8orf40 chromosome 8 open reading frame 40 ortholog EMBV3_26488 CCATATCTATCATTTGCACGCGTTTGTATTTTGGTCTGTGGAAAGGGTGGTTGGAAACTC Gene GeneID:540698|LOC540698:NM_001083499:8_cdna Constitutive 0 NULL GeneID:540698 9 GENE LOC540698 MGC155250 chromosome 6 open reading frame 211 ortholog EMBV3_07889 AAACTGCACAGCTGCAAGTGTCCGCTGCTTGGAAAAGTATGGGAAGCTGACTTGGAAGCT Gene GeneID:613555|DISC1:XM_002698805:21_cdna Constitutive 0 NULL GeneID:613555 28 GENE DISC1 NULL disrupted in schizophrenia 1 EMBV3_34034 AGCGCATCAGCGAGCTAGAGAGGAATGTGGAAGAACTTAAGCGGAAAGCTGCCCAGAATT Gene GeneID:520030|LAMB1:XM_002686780:96_cdna Constitutive 0 NULL GeneID:520030 4 GENE LAMB1 NULL laminin, beta 1 EMBV3_02856 GCCTCTGACAACCATGAAGCAATCCGTTACACATGGGTCTGAACTTGTGGACTCGGTTCA Gene BVV0102_256340 - 1 EMBV3_16237 GK000011.2:99437852-99441597 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026226 TCONS_00026230 1 XLOC_014945 Coding TCONS_00026230 XLOC_014945 Coding Coding LRRC8A 11:99411392-99438995 j TSS18847 4265 1 TCONS_00026230_2 621 5 0.845663357727701 0.00256368914357494 0.00160142115698258 0.00241136072913885 0.0010424755168489 0.00188364535822625 0.000430237880650096 0.000863077383103822 0.000813533881143645 0.000491928384459372 0.000497536632718253 4.32569396739068e-05 8.96730460978983e-05 0.000100772627481973 0.000595382174342315 9.98480759160344e-05 0.00328930793321229 0.000572552933083141 0.0022253313146653 0.00108607576639483 0.00230862530825018 0.000591466236137335 0.000384208911432119 0.00141500724167669 0.00145116862134247 0.00337127019458727 0.0024588684773246 0.00136113649866932 0.000405517656914872 5.81069025273465e-43 0.000195120685316582 XM_005213203.1 LRRC8A PREDICTED: Bos taurus leucine rich repeat containing 8 family, member A (LRRC8A), transcript variant X1, mRNA. 0.0 6616 100.00 0.85978898007034 NM_001127244.1 LRRC8A Homo sapiens leucine rich repeat containing 8 family, member A (LRRC8A), transcript variant 1, mRNA. 0.0 3965 83.47 0.858147713950762 TCONS_00026230_2 sp|Q8IWT6|LRC8A_HUMAN LRC8A_HUMAN Leucine-rich repeat-containing protein 8A; 0.0 1252 99.19 0.998389694041868 5 coding 1 0 1 1 -1.51950201361171 0.0193800877313201 -0.0314016144004794 0.635086687799535 CAAAAGGAGGCGCCGGAGGGGCGCAGTGACCGGCAGTGGGACAGAGCGGCAGGGGCTCGGGGCTGCCGGCTGGGCGGCCGGGCGCGGCGGGCCCAGGCAGGCGGCTTCCATGGAGCGAAAGGAATGCCAAGACCCTGCCCAGACAGACGTGGGCCAGCCTCAGCACCATCAGCCAGCTCTCAGATAGCAGAGCCTCAGGATTGAACCATGATTCCGGTGACAGAGCTCCGCTACTTTGCGGACACGCAGCCAGCGTACCGGATCCTGAAGCCGTGGTGGGACGTGTTCACCGACTACATCTCCATCGTCATGCTGATGATTGCTGTCTTCGGGGGCACGCTGCAGGTTACCCAGGACAAGATGATCTGCCTGCCCTGGTGCTTCTGCACACGCTCATCTTCCTGGCCTGCAGCAACTTCTGGTTCAAGTTCCCGCGCACCAGCTCCAAGCTGGAGCACTTCGTGTCCATCCTGCTCAAGTGCTTCGACTCGCCCTGGACCACGCGGGCCCTGTCGGAGACGGTGGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAAGATGAACGGCTCCATGGACAAGAAGTCATCGACGGTCAGCGAGGACGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCTCGGATCGAGCAGGGCATCGTGGACCGCTCGGAGACGGGCGTGCTGGACAAGAAGGAGGGCGAGCAGGCCAAGGCGCTGTTCGAGAAGGTGAAGAAGTTCCGGACCCACGTGGAGGAGGGGGACATCGTGTACCGGCTGTACATGCGGCAGACCATCATCAAGGTGATCAAGTTCATCCTCATCATCTGCTACACCGTCTACTACGTGCACAACATCAAGTTCGACGTGGACTGCACGGTGGACATCGAGAGCCTGACGGGCTACCGCACATACCGGTGCGCCCACCCGCTGGCCACGCTCTTCAAGATCCTGGCATCCTTCTACATCAGCCTGGTCATCTTCTACGGCCTCATCTGCATGTACACGCTCTGGTGGATGCTGCGGCGCTCCCTGAAGAAGTACTCGTTCGAGTCCATCCGCGAGGAGAGCAGCTACAGCGACATCCCCGACGTCAAGAACGACTTCGCCTTCATGCTGCACCTCATCGACCAGTACGACCCGCTGTACTCAAAACGCTTCGCTGTCTTCCTGTCGGAGGTGAGTGAGAACAAGCTGCGGCAGCTAAACCTCAACAACGAGTGGACGTTGGACAAGCTGCGCCAGCGGCTCACCAAGAATGCGCAGGACAAGCTGGAGCTGCACCTGTTCATGCTCAGCGGCATCCCTGACACGGTGTTCGACCTGGTGGAGCTGGAGGTGCTGAAGCTGGAGCTGATCCCCGACGTGACCATCCCGCCCAGCATCGCACAGCTCACGGGCCTCAAGGAGCTGTGGCTGTACCACACGGCCGCCAAGATCGAGGCGCCCGCCCTGGCCTTCCTGCGCGAGAACCTGCGGGCGCTGCACATCAAGTTCACGGACATCAAGGAGATCCCGCTGTGGATCTACAGCCTGAAGACGCTGGAGGAGCTGCACCTGACGGGCAACCTGAGCGCCGAGAACAACCGCTTCATCGTCATCGACGGGCTCCGTGAGCTCAAGCGGCTCAAGGTGCTGAGGCTGAAGAGCAATCTGAGCAAGCTGCCGCAGGTGGTCACGGACGTGGGCGTGCACCTGCAGAAACTGTCCATCAACAATGAGGGCACGAAGCTCATTGTGCTCAACAGCCTCAAGAAGATGGCCAACCTGACAGAGCTGGAGCTCATCCGCTGCGACCTGGAGCGCATCCCCCACTCCATCTTCAGCCTCCACAACCTGCAGGAGATCGACCTCAAGGACAACAACCTCAAGACCATTGAGGAGATCATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCTTAAGCTGTGGTACAACCATATCGCCTACATCCCCATCCAGATCGGCAACCTCACCAACCTCGAGCGCCTCTACCTGAACCGCAACAAGATCGAGAAGATCCCCACCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGGACCTCAGCCACAACAACCTGACCTTCCTCCCCGCTGACATCGGCCTCCTGCAGAGCCTCCAGAACTTGGCCGTCACGGCCAACCGGATCGAGGCGCTGCCACCCGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCGCTGCCCTCGCGGGTGGGCGAGCTGACCAGCCTGACCCAGATCGAGCTGCGTGGCAACCGACTGGAGTGCCTGCCTGTGGAGCTGGGCGAGTGCCCGCTGCTCAAGCGCAGTGGCCTGGTGGTGGAGGAGGACCTGTTCAACACCCTGCCCCCTGAGGTGAAGGAGCGGCTCTGGAGGGCTGACAAGGAGCAGGCCTGAGCTCCCATGGCATGGAGCACGGGTGGCCCTGAGTGGGCGGCCTGCAGCCGGACCTCCAGGCAGGCCTCGGGCCCAGGAACCCAGGAGCCCGACGGACCACCAGCCCAGCCTGTCAGCAGGGGCGCTGGAGCTGGGCCGGGCGACAGGACCGCACCTGAGGGGCTGGCCCCTTTTCTCCTCGAGACTCATGCCCCCCAGGGCGGGCGCCTGAGGGGGAGATCAGAGACCTGCAGTCCGTCTCCCAGTGAGCGCAGTATTTGGACAATCAGGGCCTGCTCCCTGGAGGCCATCGCTGCCCCAGAGGCCAAGCTGACGCCAGAGGTCCAGGGACACCTTCTTAGTTCTTGGTATTTATTTTCTCCACCTCCCGCCCTCTCCCTCCAGATAACTTATACATTCCCAAGAAAGGTCAGCTCAGATGTGGGGGGGTGTTAGAGGAAGGGTAGCCATGTTTCCGTTTTCCTTTTCTTGGTGGTGCCGCCAGCATCTAGCGCCCACCCAGACGTGAGCAGAGCGGTCCAGGGTGAACCAGCTGTGGGACGGTCACCCCGGAGGTGCCAGGCTGGGCTCTGGGGGTATGGCCCATGGGAAAGCAGGCCGCCAGCAGAGAAGCCAGGCCTGGGGTTTGCTGCCACAGTTGAGATTTTTTTAAGGAGAAAGAAATTTTTTGAAATTGATGGTTTGGGTATCAAAAAGAAAAAAATAACTTAAAAAAAAAAAGGACACTAAAGGCCAGTGAGTCGGAGTCTCGGGGCAGGACAAGTGTCCTCCCTGAGCAGAGCAGCAGGACACTGAATTAGCTTCCTTCCCCCGGGGAGCAGGCTGCAGGATGCCTCCAGTCCGCGGTGACCTCGGTCCAGGAGTCTGTCTGTTCCTCTCCCCTCCTAGAGCGGGGACTATTTTGTTCTGTTTTTTTGGTGTCTTGTTTTCTTTCTCCTCCATGTATCTTGGCAGGCTCTCGTTTCTGTGGCTGTTGGCCAAAGGGAATGTTCCGGAGCTGCCAAGAAGGGAGGGGACTCGGGTTGGCTCATCCCCAGATGAACGGTGCTCCGCCCCCGCCCCCTCCCCGCTGCACCCTCCGTCCTCCCTGCCCTGACTTTGTGGCAGTGTTAGGAGCCCAGAGGAGCCGCCTCACCCGGACTCTGCTTTCGCACCTTGTGTGTCATGAGTTAGCCCAGTGCCACCACTAGCCTCAGCGGCTGACGTCAGCCCTGTCCCCACCTGGTGACGTGCCACCCCGTCCTTCAGCACGGGACACCTGGAGGCAGGGTCGCCACCGGGGTAGACAGGCCCTCCAGGTTCTGGATAGGTTTCTGTCCCAGGCGCCCAGCCCACGCAGCGCCTGGTGGCGGGAAAGCTAGCTCACTTCATTGAGATCAGTCTCCAGGGTCCCCGCCACCTTCGATCGATCACTTGGACACTAAGGCACGTTCTCGCGTCTCTCGTCTTCACGATTATGTCCATTTGTCCATTTGTGTTTTCCGCGCCGTGTCATCAGATGTAATCCTCAGAAATAATGCACACTAGCCTCTGACAACCATGAAGCAATCCGTTACACATGGGTCTGAACTTGTGGACTCGGTTCAAATAGCAAATAAACCTATAACAAAGTGGCCTTTGGAGGTCTCCATGTCTCTCGGGTCTCTGAGGTCCCTTCAGCCCCATGGTCTCTGAGAAGATAAGGAACTCTGCTTCCCTACCTGCCCCATGAAGCCAGAAGCCCCTCAGAGGCAGCTACCAGCAGACACTCACTGACACAGTCCCGTTGCCTGTCAGGAGTGGATCCTGCAGCCAGGTGTCCTCTGCCGGCCAGAGCCTAGGGTTCCGGCCCTCGTGAGC EMBV3_35872 TTTATTTAAACACTGAGGGGCGGGGGGTTCACTGGTAAAAGCTGTCCGTACAGAGATCGC Gene GeneID:100337431|LOC100337431:XM_002696467:96_cdna Constitutive 0 NULL GeneID:100337431 20 GENE LOC100337431 NULL solute carrier family 12, member 7-like EMBV3_04467 GATGCTGGCCATCGTGCACTCCTACGTCACCCACAAGACAGTTAAAGAAGAGGAGAAGCA Gene GeneID:618757|PHF21B:XM_002687979:27_cdna Constitutive 0 NULL GeneID:618757 5 GENE PHF21B NULL PHD finger protein 21B EMBV3_19152 GTCTATGGCTTTTAATTTCTTTATTTTAAATATACTGTCACATTGAAGCACTGGTTGGGC Gene GeneID:539121|MLL5:XM_002686762:57_cdna Constitutive 2 NULL GeneID:539121 4 GENE MLL5 MGC151673 myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) EMBV3_06176 GCACAACAGGTGCTAGTTTTGAGAAGGCCCAGCAGGAGTTTGCAACAGGTGTGATGTCCA Gene GeneID:535352|SCAMP1:NM_001076054:27_cdna Constitutive 1 NULL GeneID:535352 10 GENE SCAMP1 MGC127646 secretory carrier membrane protein 1 EMBV3_07215 GTCTCAAATACTCACCAGGGGACTAAGACAGTTGACAGAATGGTTGGAATTTTGGTGTTC Gene BVV0102_069567 - 0 NULL GK000001.2:97843626-97882796 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13672 TGTGTACAGCTGTGTATATTCAGGGGTGTTCTCCGTCTGGTACCCGCTGTGGGCGTCTCT Gene BVT0102_189476 + 1 EMBV3_11528 GK000005.2:57400282-57416302 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17116 TTGTGTAATCCAAGTCAGCCCTCTGCTACCACTTTTTTTTGCTGCTTGTATTTACAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09304 GAATGGACAGTTTTAGTGGCTATAGTGATTTCTTAATGGACCGCTGCTCATGCCTCAGGG Gene GeneID:536020|CACHD1:XM_002686328:111_cdna UTR3_Alt 2 NULL GeneID:536020 3 GENE CACHD1 NULL cache domain containing 1 EMBV3_26524 CTTCTGCTCCATCTCCTCACCACATTAGCCCCCGGAGAGTTCCAGCTCCTTCTTCAATAA Gene GeneID:524909|LOC524909:XM_002689612:4_cdna Constitutive 0 NULL GeneID:524909 8 GENE LOC524909 NULL similar to GLIS family zinc finger 3 EMBV3_41390 ATCCCGGGAACTTTGACACCTCGTCCCGGGGCAGGAGGAGAGATGAGCAGCTGTCCCCTG Variant GeneID:509889|FOSL2:XM_002691451:281_cdna 213^503 1 EMBV3_13950 GeneID:509889 11 GENE FOSL2 NULL FOS-like antigen 2 EMBV3_05893 TCGTTGGAGACGAAGTTCAGCCCTTCTCGCTTGATGAAGAATTCGATTACGATGCGGTGG Gene GeneID:614192|C15H11orf74:NM_001034750:63_cdna Constitutive 1 NULL GeneID:614192 15 GENE C15H11orf74 C11orf74 MGC128586 MGC157086 chromosome 11 open reading frame 74 ortholog EMBV3_14353 CTCCTAAAACTTGGACCCACTCTCAACCTGATCCAGCCTACAATCCCCCCTTCACCATCA Gene BVT0102_103406 + 1 EMBV3_04167 GK000011.2:75130699-75141458 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028530 TCONS_00028534 TCONS_00028532 TCONS_00025526 TCONS_00028535 TCONS_00028533 TCONS_00028529 TCONS_00028531 2 XLOC_015496 XLOC_014782 Coding TCONS_00025526 XLOC_014782 NonCoding NonCoding - 11:75131067-75131671 - TSS18519 328 0.713414634146341 2 0.459369817578773 0 0 0 5.06350535391124e-05 0.00192328141601787 7.41285686197051e-05 0 0 0 0.000355001901513459 3.25518557830216e-05 0.00208582319445879 1.4443793519378e-05 0.00111981819967486 7.06638222997777e-05 0 0 0 2.18625817978158e-05 0 5.2035179112641e-45 1.6219954472754e-86 1.12228862936343e-135 0 4.51899209208342e-05 0 0 0 5.76060879575424e-05 0.000894430161271546 XM_005193961.1 LOC101908074 PREDICTED: Bos taurus serine/arginine repetitive matrix protein 1-like (LOC101908074), mRNA. 7e-92 340 100.00 0.570121951219512 0 noncoding 1 1 1 1 -0.192742047938691 0.489087772367705 0.036778398454881 0.68369962468821 AGCTAGGTGTGGGCTCACCTCAGAACTCAGCACCAACTTACCTGTGTACTTCGTCAGCCTCTGATTGAATCTGTGGAGAGATTTCCCTGCATTCTGACCATGTTGAACTTTACCTGAGACCCGAGATTCCGGAAAGCGACGGCTCCTAAAACTTGGACCCACTCTCAACCTGATCCAGCCTACAATCCCCCCTTCACCATCACTCGGAAAAGTAGGCTGACCTCCACATAAACCACCCTGATGTGCTGAGTGATCAACTGCCACCTCCACCCATCCATCCCCCTGGCCCTATGCCCAGTTCTGTGTAGTCTTTGTTCCTCCTCCCTCT TCONS_00028534 TCONS_00028534 r 5' 0 TCONS_00028534 TCONS_00028534 r 5' 0 EMBV3_16299 CCTTCTAGCACGTCTCGAAAATTTTAAATCCTAGGGGAAGTGTATCCGAGATGGGAGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40276 CTTTGAAAGGATGGGGCGACTTGGTTCAGGTTTTATGGAGCAAAAGGAATGTCTGCTCGG Gene GeneID:507384|NPEPL1:NM_001034297:919_cdna Constitutive 0 NULL GeneID:507384 13 GENE NPEPL1 MGC128982 aminopeptidase-like 1 EMBV3_09513 TCATCACCTTGCTGTAGGAGTCACCTTGGACTCTTCGGTCTCCCCCAGGGCTGATTCTGT Gene GeneID:281664|CAPNS1:NM_174261:502_cdna Constitutive 2 NULL GeneID:281664 18 GENE CAPNS1 CAPN4 calpain, small subunit 1 EMBV3_34366 ATGTGGCAGCAGCATGCAAGTACACTCTCTGTCCTTCCCCTAAACGGCTGAAAATCCAGT Gene BVV0102_309220 + 0 NULL GK000026.2:43053286-43058244 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41280 TTCCAGGCCCTGGTGGATGAAGGAGATGAGAGCCCCACCCAGAAGGGAGAACCGGATTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22850 ATATACTGAAATCACCAAACTGACCGTCTTTGGCAGGGCCGCATTACCTGCACCTCACAC Gene GeneID:751574|LOC751574:NM_001076528:156_cdna Constitutive 0 NULL GeneID:751574 19 GENE LOC751574 NULL secreted and transmembrane protein 1B EMBV3_06227 TCTCTGCTACCCTCCCATATCCCAGCAGATTGTATGCCAAGAGTCCCTTGCCTCTAGTAA Gene GeneID:514761|AP3M1:NM_001075680:311_cdna UTR3_Alt 2 NULL GeneID:514761 28 GENE AP3M1 MGC137644 adaptor-related protein complex 3, mu 1 subunit EMBV3_12950 TACAGCTCTTTTTCAGCTGTGCCTGAAGATAATGTCATAATCACTGTCTGTAAGACCATC Gene BVT0101_024082 + 0 NULL GK000027.2:20234154-20419469 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155214 TCONS_00155196 TCONS_00155206 1 XLOC_094665 NonCoding TCONS_00155206 XLOC_094665 NonCoding NonCoding LOC781916 27:20062633-20242889 x TSS116175 1200 4 TCONS_00155206_5 52 4 0.993364955202352 9.26464475022822e-05 1.43943562829628e-09 3.14094782229218e-86 0.000139243386381847 3.39976342763574e-05 3.3232573024973e-52 4.27731113833709e-05 9.64198967355903e-12 2.07229325572619e-42 7.13693528800451e-05 9.2810246545303e-17 0 1.71905729314515e-56 7.55902680469441e-308 2.03784513746307e-06 0 0 0 0.00033752358913872 5.6875056770853e-301 5.80956676802556e-26 0 0 0 0.000449034819419148 0 1.01601913150335e-35 0 1.67874878679302e-46 0 XR_230039.1 LOC101908557 PREDICTED: Bos taurus uncharacterized LOC101908557 (LOC101908557), 2e-54 217 100.00 0.0991666666666667 0 noncoding 0 0 0 0 NA NA NA NA AGGGGGCTGGGTGGATGGATGGGTGGGTAGAAGGAAGAGAAGAAGGAAAGAAGAGAGACCTCAGGAAGCAAGTCTGCTCATCACGGCTTCATTATACACCGAACCTTCTGAGTTAGAAGAAATAATTGTGGAGCACATACTATCTGTGCCAAGCGCTGGACAGAGAACCAAGGACCCCTCCGAGTCCTCATGGAGCTTTTATTCTGAGCTTCTGGATTTCTGACTTGGTTACAAAGAATCCTCTTTCCTAAGATTATGTCCTGCTTTCTCAGCAGTTCAAGGATGTCAGGGCCAATATCTCCACCGTTCATTTGGTATTGCCTAATGGTCAAGGTGTGGCTGTCCCAGCTTCCGCCATCACTTCTGCATTCAAAGCTGGAAGAAGGAGGATGGACTTTCTAAGTTGTCCATTTACAAAAACCGAGATAGTTTGGGTACTTTCAAAGGGCACAAAATCTTTCTCAGAACTTGCATTCTCCAACAGAGTTTCACTTATATTTATTGGCAAAAATTAGATCATATTGCCAGCCCTGACTGAGGAAGGCTTGAAAAGTAGGGAAAAGTCTATGGGAGACACTTTGGTATTGGCCTTGCTCTTCAGAGATGCTGTAATCTTGGGACCATGTTCCATTCTTGGGATGTGGGAATGAGAAAAGATTACTCCTAGGCATTAACATGACAGAGAGTAGAATCAAGATATTAGACTGTATGGAATTAGAGGCATTTGCAAATGTACCTGAAGTAATTTCTTTTTCTTAAATTATGTCACCTAAATTGAGACTGCCTTCTCAGAGACAAATTATTTTGCATCTATGGATTCATTTAGGATAATAACTAATGAAATATATAGCATGTTAAAACCTCAGTATATTCTAATCGTGCCTGTTTATGTCTTCTTTAAAGAACTTAACAAGTATAAACTCCATATATTTTACAAATGATATTTCTTCCTTTTCCCATGCTGAGCTGTTTTCATGAGAATTCCTACTTTAAAAGCTAAGTTCACGGTAATTGACTCATTATATTTTTGTAATGCAGGACAAAATGCAACTTTATTGTTTATATACAGCTCTTTTTCAGCTGTGCCTGAAGATAATGTCATAATCACTGTCTGTAAGACCATCTTACAATAATCAACAATATTCAGTAAGTGTTCAATCCCAAATTGTTTACATGGTAATAAAATCAAAGGGGTGATTT TCONS_00156130 r 5' 2434 TCONS_00155191 s 3' 5971 EMBV3_07748 AGTTGGCTGGGCCGGACCCAGTCCCCAGGCTGTGACCACCGAACTGTACCTCAAACAGAT Gene GeneID:512924|RHOD:XM_002699362:269_cdna Constitutive 0 NULL GeneID:512924 29 GENE RHOD NULL ras homolog gene family, member D EMBV3_13198 CCTGTACACTGACATGTCTTACTACCATACACTTTACTTTTTGCAAGTCATACTCCTCAC Gene BVV0102_192808 + 0 NULL GK000012.2:3446605-5085885 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43102 AAACATCTTTAGAGAGGAAGCTGATCCTGGGGAAGGAGAAGAGAGCCCCTGGCTGTTCCA Gene GeneID:100336723|LOC100336723:XM_002687852:222_cdna Constitutive 0 NULL GeneID:100336723 5 GENE LOC100336723 NULL WC1-like EMBV3_11695 CAAACAGTGGGGCTGGACGCAGGGTCGGTGGCGCAAAAAGAGTGCTGAATTTTTACTACA Gene GeneID:619156|LOC619156:XR_084150:142_cdna Constitutive 0 NULL GeneID:619156 X PSEUDO LOC619156 NULL similar to ribosomal protein L17 EMBV3_43414 GTGAAAGTGAAAGTGGCTCAGTTGTATCCGACTCTTTGTGACCCCATGGACTATACAGCC Gene BVV0102_217620 + 0 NULL GK000003.2:117646681-117651525 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09248 AAGGGAGTGAACACGGGAGCCGTGGGCAGCTACATCTATGACAAGGACCCTGAAGGCAAA Gene GeneID:780821|CRIP2:NM_001079649:342_cdna Constitutive 1 NULL GeneID:780821 21 GENE CRIP2 MGC140056 cysteine-rich protein 2 EMBV3_35257 AAGTACTATCAGGGCAAGTAGCCGGATCGGCCTGGATGAAAGGGAGCCTATATTCCTAAG Gene BVT0102_183322 + 1 EMBV3_01827 GK000002.2:6101742-6213565 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02552 ATCATAATCGGCTTTCTCCAAGTAACTAGCTGCAGACTCAAAGGAACGTGTCCCCGGTGC Gene GeneID:782388|LOC782388:XR_084604:614_cdna Constitutive 0 NULL GeneID:782388 18 PSEUDO LOC782388 NULL similar to copine II EMBV3_10779 CATAAGGTTCTTCGTTTAGCTCAGAAGTAGTTGAAAGATCACAGGTGACTAATCTGAAGG Gene BVT0102_187955 + 0 NULL GK000010.2:16247611-16268190 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012833 TCONS_00012827 TCONS_00012830 TCONS_00012825 TCONS_00012831 TCONS_00012829 1 XLOC_007930 Coding TCONS_00012825 XLOC_007930 Coding Coding PAQR5 10:16151827-16251170 j TSS9639 4803 1 TCONS_00012825_3 330 0.104934415990006 8 0.951732399186648 0.000978589003493976 3.30908568059685e-08 4.18569750315557e-05 0.000462109668521635 1.12156986966529e-09 1.82840965045437e-07 0.000597876932785423 0.000183445894324319 3.76489412210917e-06 2.0231745968501e-22 4.34787153236032e-05 1.13461237426681e-14 3.15610700335495e-09 4.86278532451537e-22 3.98450259203139e-05 7.58279053333839e-05 3.08031280701289e-12 0 0.000651241968528616 0.000362560590420553 0.000542809836283702 3.77018239414156e-09 5.39130830533888e-12 6.64608426186513e-21 9.76546603781022e-05 3.0334032977621e-14 0.000180978250118511 7.66561017837042e-18 2.04391168605191e-14 1.09854962902868e-12 XM_005211329.1 KIF23 PREDICTED: Bos taurus kinesin family member 23 (KIF23), transcript 0.0 2643 100.00 0.304809494066209 NM_001104554.1 PAQR5 Homo sapiens progestin and adipoQ receptor family member V (PAQR5), 0.0 2556 76.99 0.692900270664168 TCONS_00012825_3 sp|Q9NXK6|MPRG_HUMAN MPRG_HUMAN Membrane progestin receptor gamma; 0.0 585 83.33 0.996969696969697 1 coding 0 0 0 0 -0.104765642840533 0.512961964395816 0.0380861807372406 0.530264026333206 GCGCCGACCGCCCAGCCAGGTGCAGCGAGCCGGCGATCCAGCGGCACACGCGGCAGCAAGGAGTCCAGGTCTGCTCCTGCGAGTCCTGCGTCCCTGCGCCCTTTCTGCCGGATGCCCGGGACCCTCGGAGCCCAGTGAAGCGGCTCAGATCCGGCTGGCCAGAGGCGCCCGGAGCCATGTAAGAACTTTGAGCAAGTCCTGGTGACAGGGACCGGCTGTCACCCACCGGTCTTCCCAGCCTGACTTCAAGATGCTGAGCCTGAAGCTACCCAGGCTGCTGAGCATGGAGCAGGTGCCCCAGGTGTTCCATGAACAGGGCATCCTCTTCGGCTACCGACACCCACAGAGTTCCGCCACTGCCTGCCTCCTCAGCCTTTTTCAAATGACCAATGAGACCCTCAACATCTGGACGCACTTGCTGCCCTTCTGGTTCTTCTCGTGGAGGTTTGTGAGCACCCTGCAAGTGACGGACATCCTGAATGACAGCTACTCCTGGCCTCTGCTCGTGTACATGGGCGCCAGCTGCTTGTTCCCCTTGGCATCCAGCTGTGCACACACCTTCAGCTCCATGTCCAGGAACGCCCGCCATATCTGCTACTTCCTGGACTACGGCGCCGTCAACCTCTTCAGCCTGGGCTGTGCCATCGCCTACTCTGCCTATGTTTTCCCGGACACGCTGGTGAGCACCACCTTCCATGACTACTACCTGACCCTGGCTGTGCTGAACACCATCATTAGCATCTGGCTCTCCTGCTACTCCAGGTTTTTTGAGATACAGAAGCCTGGGATCTGTAAGATGCTTCGTGTCCTGGCCTTTGCTTTTCCCTATACCTGGGACTCCCTTCCCGTCTTATTCAGGGTATTCCTGCTCCCCTGGGAGAGCGCGGAGAACGAAGCCACCGTGTACCACCAGAAGCACGTGGCCATGACCCTCCTGGCCTCTTTCTTCTACTCTGCGCATCTGCCGGAGCGCCTGGCCCCTGGACGCTTCGACTACATCGGTCACAGCCACCAGCTGTTTCACGTGTGTGTGATCCTGGCCACACACATGCAGATGGAAGCCATCCTTCTGGACAAGACTCTGAGGAAGGAATGGCTGCTGACCCACTGCAGGCCCCTGGTGTTCGCCCAGATAGCCGGAGCCATACTTCTATGCCTCATCTTCAGCCTCAGCAACATAGTTTATTTCTCAGCTGCTCTGTATAGGATTCCCGAGCCGGAATTACATAAAAAGGAAACCTGATTCATACCATAAGCTTTTCGTACCAAATGTCAGCATTAAGCTACGACATTCTAACTACCATAAGCCAATGGCATGGTCCCAGTTTGCAGTGGCCTAAAATATTTAGAATGCTTGATATCTTGGCATTTTTGAGCGGGTTCAGGTCCATAAGGTATTTAACTGGGGACACTTCTCTAGATGTGCATTGGATTCTGTAAGTACGATTTTAAAAGGGGGACATGGGTTCAAGTCAGTCCTCATTCATGCAAATCATTATTTCATTTAGCTTTTAATTTATTTAAAGTATGTTCTCCAATTCTATTTAAACAGCTGGATTAGGCGTACCACCCTTGTAGCTTTACTATTAAATAGTTGGATTAAGCCTTACTACCCTTGAAGTATTACTCTTGGAAAATGGAACACGCTTCATCTGATGAGTTTCATGTAGCAAAGCCTCTCCTACCACAGTGGAGGAGGATGAGCTAGGAAGGTCAGTCGGGGAACCTGAGAAAAGGGAAACTGAGTCTTCGGGAGCTGTGGGGACTGGGAAAGCATTCCAGAATGAAGAAACCTGGTTTGGGGAGGGACCTTCTTCCTTTCCCCACCTAGTGAAGGAAATGAAAGAGCTCCCTCTTTCCCCGCAAGTCCATTCTGCTTCACCATGCAAGGTTCCCATGCCATTATGGACTTGGATTTTGTTAAAAGTTCACAGCCTGTGGCTGGGGTGTCATATGCTCTGTTTTGCTCTGTTTTCTTGTTGCCAGCTTGATGCTGTGAAGTATTATGCAGCACAGGTGAAGTGTGTTACCCAGAGGGCACTAACTGAATTAATCCCAATTGGTTGTACTCATCCATCACCCTTTAACCAATGACATCACAATGTTTGGGGAGGTTACATTTAATGTTGCTTCAGCATTTCATATGTGCTGCAGAATTTAACGTTCACGTGCAGAGGATACTACAGACTTTGCCAAAGGAATGGAAACGCTTGGTGAGCTTGTGATAAATGTAGATTCCCCAGGCGAATCAGGAGACGCTGCTTTACCAGTTTAAAATGTTGGTTTCCTGCAGAAGGTCTGTACTGGGACAAGTTCCCCAGGTGATTGTCAGGAGGGCCATGGGCCAAACCTGCAGAAATGCCGGTGTCACGAATTCCTGAATGCCCAGGGCCCATCAGCTGTGTTTTGATTGGTCTAACTTTCAGCAGCTCACCACCTAAGGCTGTGTCCTCTGCTTTCCACTCTGTGGAGTACTGAAACACTGAGTATTTTCTCACCTGTTGCATTACTCATTAAAAGTTCAGTATTTCGTGGTGTTTTCATAGAGTACAGAAATGCTGAGGCCCATCTCTCCCTGACATGCACTTGCTGACGACTTAAGGGACCATCCATCGCAATGCAGGAGCCTCTTCTGCTGACTCAGGAACACCCCAGTTTCTTAGAACACTGCCTCTATGGTTAACTGGCCCAGACGTTTGAATGACCTTGTAAGTAGCTCATCAGCTAATACTCTGAAGACAAGTAGCAATTTATATCAGATATGAGTGGTCAACAAATATGATTTCATTAGTTTTATTGTCTGTTTACTTCCTCTGGGGAAGGTAGACTGATAAAATTATATAGGCTGGTAAATTTTTGGTACATTAATTGCAAGCTGCACGACAGAATTTGTTTTTTTGGCAAGAGGTTGACACTATTACTGGAATTGTACTCCAGCAGGGGTTCTGGGCTTCCATTTCATCTTACTGTAACTTCAGTTTTATGGTGGACAGAGGTACTAACTTTAAGTACTCCATTTTAGTAATGCCAAAGGCATGAAGGCTTCTTAATTCTCTTGTTTATAGAAAGTAACATAAGGTTCTTCGTTTAGCTCAGAAGTAGTTGAAAGATCACAGGTGACTAATCTGAAGGACTTTTAGAACATTTAGTCTTTGGTTACATTGCTTTTTCAGCATTGCTTAATGATGAAAATGAAATGTTAAATCAACAAAATAAGGCCAAGTGTTCATAATGTTTTTATACATTTGGTAAACTTAGTCCCATTGTATACTTTTGGACAGTGTTACAATTAAATTTTATAACAGTTTGCAGTACGCTGATTTGGAAACTTATAATGATGAATGAGAATGTGTTCAAATATATTCATTTTCATTAAGTATTATGAAGTCTAATGTAAATATAGTTTTGCTAAGCCATTCCAGAAATTAAAAAGACTGGCAGTGGGTCAGGTGAAAACCTCACTGGGAGGATGTCTTTTAATGTGTGTGTGTGCTCAGCTGTGTCCGACTCTGCAACCCCACGGACTATGGCCCACCAGGCTCCTCTCCATGAAATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGAACGAACCCAGGTCTTATGTGGCTCCTGCATTGGCAGGCGGGTTCTTTACCACTGAGCCACTTGGGAAGCCTTGTCTTTTAAGGTAGCAGTTCTCAATTTTTTTTTTTTTTTTTAACATCTCAGTACACTTTGGAGATATACCATATTCCCCCTGGTAGCGATTGCTCACCAAGGCCCTGTCTCCTAAGGGGCAAGGGGAGAGGGCACACTCCTGAAGGGATGTACCTCTTCCCCCTCCCTGGGCTCAAGAAACACTACTCTAGAATTTACTGATCATTTTCATTGTGATAAAACTCAGGTATGCTTGGATGAGGCCATTTGGTCACTTGCCTCTTCCTTCAGTCACAAATGGAGAGTTTAATTTTTCTTGTGCAGTCTTTGGAGAGGAACGCTCCTTCTTTCCTAAAGACATGAATTTGTCAGACTTCCCTGGTGGTCCAGTGGTTGACAATCCACTGCCAAAGTAGGGGACACAGTGTGATCTCTGGTCCAGGAAGATCCCACATGCCTCAGACAATTAAGCCTGTGCACCACAACTGCTGAGCCTGAGCTCTAAGAGCCCAGGAGTAGTAACTACTGGACTGCTGAGCCTGAGTGCCCTGGGGCCCTTTCTCCACAGTAAGAGAAGCCAGTGCTGTGAGAAGCCTGCGCATTACGACCGGAGGGTAGCCCGCACGCAGCAACAAAGACGCAACGCAGCCCAAAATAAATAAAGTATATTTTTTAAAAAGACAAGAACAGGTCCTTGGTGATTAGAATTAGAAGTGGGATGTTTAGAAGGCTTTTGAATACAAGTGATTTAGATATTTGGTCTGCAGCAATCTTTCGCAAAGTGTTTTTTGGAGAAGGCACTGAGTTCCCAGGAGATATTCTGAGGAAGGCAGGATGCTGTTCTGGAAAAGAATGCTTTTGTCAGGTTCATCAGAGAAACCTTTCATTCCCATCTGCTTTGTCCTGAATTTGGCTTGGCCATGGTACCCTTTATATATGAAACGGCTCTTAACCCTGTATATCAGCATTTTGTAACATGTTGTTGAATGCCAGCCTCTGATTTTCCAGTCGACAATCCATTATGAATGAAAAGGCAGAGACCTATTTCCAGACTCAGAGATGTTCTTCCAGCTTATGCTAATGTCTGGTTTTCTTAAATTATGGTAGGAAAAATAAAATTTATTTATTATAG EMBV3_06912 CCTCCATCAGCATCCATCAATCCTGTTAGTCTTCAGTCATCAACTGTGATTCCAGGCATG Gene GeneID:618145|CCDC41:XM_002687204:60_cdna Constitutive 0 NULL GeneID:618145 5 GENE CCDC41 NULL coiled-coil domain containing 41 EMBV3_34566 CCATCAACTACATGGGCGTCACCTACAGCCTCACCACCAACTGCTGCACTGGCCACATGT Gene GeneID:767953|SPACA4:NM_001077023:451_cdna Constitutive 0 NULL GeneID:767953 18 GENE SPACA4 MGC134488 sperm acrosome associated 4 EMBV3_10919 CTCCTAGCTCCTGTCTCCCTGATCCTGGTCTCCTACTGGAATATCATCTCCACTGTGATC Gene GeneID:511622|LOC511622:XM_002693167:113_cdna Constitutive 0 NULL GeneID:511622 15 GENE LOC511622 NULL similar to mCG1046659 EMBV3_24162 GCACTTCCTCCCAGGATCTATTCTTTTGGACAAAATACGAAGTGTTGGTGCAGTTTGAGG Gene GeneID:539753|BTF3L4:NM_001098106:106_cdna Constitutive 0 NULL GeneID:539753 3 GENE BTF3L4 MGC133868 basic transcription factor 3-like 4 EMBV3_22467 CAATGACATGTACCACCCTCTGCCTCTTTTGTGACTGGAGGTTAGAGTGAGTGTTGGAGG Gene GeneID:281110|CYB5A:NM_174033:52_cdna UTR3_Alt 2 NULL GeneID:281110 24 GENE CYB5A CYB5 MGC128769 CYB5 protein EMBV3_01688 TTAAAAGAAGAACTTGCAAAAGCTCAGAGGGAAGCTCATAAGATGGTGAGAGAAGCAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31298 CCCCTACATATGCTGTCTACAAGAGACCCACCTCAAAACAGGGGACACATACAGACTGAA Gene BVT0102_433637 - 1 EMBV3_31019 GK000002.2:19468284-19659539 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00208613 TCONS_00088086 TCONS_00252006 TCONS_00238893 TCONS_00239411 TCONS_00244651 TCONS_00190335 TCONS_00162783 TCONS_00214738 TCONS_00078532 TCONS_00040697 TCONS_00166330 TCONS_00161836 TCONS_00238308 TCONS_00254922 TCONS_00055678 TCONS_00251853 TCONS_00129726 TCONS_00160965 TCONS_00187806 TCONS_00152890 TCONS_00135528 TCONS_00207978 TCONS_00031280 TCONS_00070841 TCONS_00197486 TCONS_00091329 TCONS_00253888 TCONS_00189889 TCONS_00177994 TCONS_00210178 TCONS_00017462 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00244653 TCONS_00088289 TCONS_00049393 TCONS_00244654 TCONS_00222057 TCONS_00056147 TCONS_00187583 TCONS_00021194 TCONS_00116799 TCONS_00089425 TCONS_00019991 TCONS_00040834 TCONS_00206862 TCONS_00189806 TCONS_00198434 TCONS_00152647 TCONS_00019197 TCONS_00148253 TCONS_00072406 TCONS_00125002 TCONS_00019962 TCONS_00040896 TCONS_00089139 TCONS_00239410 TCONS_00175881 59 XLOC_142855 XLOC_127126 XLOC_052873 XLOC_154947 XLOC_145559 XLOC_146077 XLOC_150512 XLOC_116370 XLOC_099664 XLOC_130757 XLOC_047420 XLOC_024513 XLOC_101168 XLOC_098721 XLOC_144975 XLOC_157854 XLOC_033486 XLOC_154794 XLOC_078439 XLOC_097858 XLOC_113849 XLOC_092655 XLOC_081751 XLOC_126492 XLOC_017528 XLOC_042618 XLOC_119147 XLOC_056104 XLOC_156826 XLOC_115926 XLOC_107767 XLOC_128688 XLOC_009039 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_053076 XLOC_029524 XLOC_135366 XLOC_033950 XLOC_113628 XLOC_011867 XLOC_070965 XLOC_054210 XLOC_010669 XLOC_024648 XLOC_125382 XLOC_115843 XLOC_120088 XLOC_092412 XLOC_009877 XLOC_090135 XLOC_044175 XLOC_076545 XLOC_010640 XLOC_024710 XLOC_053925 XLOC_146076 XLOC_105660 Coding TCONS_00222057 XLOC_135366 Coding Coding - 7:70682995-70686837 - TSS166055 3842 2 TCONS_00222057_5 115 0.997917751171265 1 0 5.05901659931964e-07 4.79493141964255e-06 0 0 5.71135386159485e-07 1.33005749818789e-07 0 1.71054331302813e-07 1.30064629441795e-06 1.07092175724304e-06 1.48958039000441e-07 4.13638474427097e-06 0 2.44871816558218e-07 1.59623789052634e-07 0.00332700385437757 0.000192296171611 0.00859026605852141 1.86645827677117e-06 1.07770000193695e-05 6.58452760786576e-07 0.000464821333825734 0.000262264095623234 0.000504714169171867 5.63546402276529e-06 1.83380325625921e-06 1.6944788577739e-06 4.58341979923324e-06 6.31781897174857e-06 2.73853284638068e-06 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-114 417 93.48 0.0715773034877668 TCONS_00222057_9 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 2e-22 90.9 45.26 0.92156862745098 1 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 CCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGAGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGGATGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCCTGGGGTCGCAAAGAGTTGGACACACTGAGCGACTGAACTGAACTGAACTGAAGACATCACCAGACCCACTCACAGAACAAAGGACTGAGCAGAACTAGCCAGCTGTGGATGGGCCCATCCCCCACCGGAGACAAGCAGGGGAGGGCAGCCAGAGCCGGAAGGGGGCAATCTCGACCTCAGAGAGGCATCCTCTACCAAACTGCAAGCAGGCTTCACTGCTAACCAAGACTTCTTGGGATTCTGGATGGTCAATCCACTGGGAGGATCACAACCAGAGATCAGCCTCCCAGAAGAGACACACAGATCACCTGAGAAGGCGCGGCCGCTGTACACCCAGAACACCGAGCGCCGGACGGGGAGGCCATAAGACACAGCCTCCAACAGGGGGTGGGGGACTGTACTCACCAAACACCTGGTCACCTGAGCTGCTCGGACCTGGGAAGGGCACAAAATGCAGGCCCAACCAAGTCTGAGCCTTTGTGGACTACCCGAGAGCCTGAACCTGAGCGGCTTAGACCTGGGCAGTGCATGCAACCCAGGGCCTGCCACAGACAGTTCCCCGCAGAGCAACCTAGAGCCTGAGCAGTGTAGACTGGGAAAGCACACACGCCGTGAGCAGGGGCAAACCTGGTGTGGCCGAGACACTGCGAGCACTCCCCACACATGCCAGTGATATTTGTTTGCAGTGTTCCTCCCTCCCCACAGCACGATTGAACAAGTGAGCCTAAGAAAAGTGACCTCCACCAGCCCCTTGTGTCAGGGCGGAAATTAGACACTGAAGAGACCAGCAAACAGAAGAAGCTAAAATAAACAGAAGGAACCGCTTTGGAAGTGAGAGGTGCAATAGATTAAAACCCTGTAGTTAACACCGACTACATAGGAAGGGGCCTATAGATCTTGAAGAACTATAAGCCAGAGCGAGGAACTATCTGAAAATGAACTGCCCCAAACTGTCTGCAACAGCTCCAGAGAAAGTCCTAGATATATTTTTTACTATTATCATTTTATAAATTTTCATAAAATTTTTTATATTTTTAAGTCCTATATTACTCCTTTAATTTTTATTTTTATAACCTACTACTACTACTACTCAGTCGCTTCAGTCATGTCCGATTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATTGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTATAACCTACTATTACCTTGCAAAAAAAAAAAAAAAAAAAAAAGACCCTATTTTTAAAGCAAACTTCATATATATCTATATATTTTTTATAATTTTGTGACTTTGTTTTGTTTTTTTTAATATTGTATTTTTGAGAATCTAACCTCTACTCTAGATTTTTAATCTTTGCTTTTTGGTATTTGTTATCAATTTTGTACATTTAAGAACCCAATCTTCAGTACCCATTTTTACTTGGGAGTGAGATTACTGGCCTGATTGCTGTCTCCCCCTTTTGACTCTTCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCCTTCTCTTCTCTACCCAACTCTATGAATCTCTTTGTGTGTTCCAGGCTGTGGAGAACACTTAGGGAACTGATGACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCGCCTATTATCCTCCTGGCTACCTCTGTCTCTCTCCTTTTGATTCCACCTATTATCCTTCTGACTACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCATGAACATCTCTGAGGGATCCAGACTGTGGAGAACACATAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCCCTTTTGATTCCCACTCTTCTCCAAACCCACTGACATCTCAAAACTCACTACTGGACACTTCATTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAGCACTGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCCATCCAACCCCACCCACAGTGAGGAACCTCCAAAATAAAAAGGAACCACAAACTGCCAGAATATGGAAAGGCCACCCCAAACACAGCATTATAAACAAGATGAAATGGCAGAAAAATACTCATCAGGTAAAGGAACAGGATAAATGCCCATCAAACTAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAAATGACCCAAAATCTTGAAAACAAAACGGAGTCACAGATAAGTAGCCTGGAGACAAGGATTGGGAATATGCAACAAATGTTGAACAAGGACCTAGAAGAAATAAAAGAGACAATATATAATGAATAATGCAATAAATGAGATCAAAACCCTCTGGAGGGAACCAACAGTAGAATAATGGAAGCAGAAGATAGGATAAATGAGGTAGAAGGAGTGTTAGAAATAAATGAAACAGAGAGGAAAAAAGAATTAAAAGAAATGAGGACAAACTCAGAGACCTCTGGGACAATGTTAAACAACCCAACATTCGAATCATAGGAGTCCCAGAAGAAGAAGACAAACAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAGTCACCCAAGTCCAAGAAACCCAGAGAGTCCTAAACAGGGTAAACCCAAAGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAGTATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGAAGGGAATGGCAGGACATACTTAAAGTGATGAAAAAGGAAAAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCACTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAGAAAGGGTGTATAAACTCAAACCCAAAACAACAAAGTAAACGGCATTGGGATCATACTTATCAATAATTACCTTAAATGAAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAAAAACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGTGATGGAAAAAGATATTCCATGCAAATAGAGACCAAAAGAAAGCAGGAATAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAGGAAACAAAGAAGGATACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACATAGGACCACCACACTATGTAAGACAAATGCTAACAAGTATGAAAGGGAAATTAACAGTAACACAATAATAGAGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAAATAAACAGAAAAT TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 24667 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 28508 EMBV3_40831 TATATGACATAGGTTCTTGGCATGGGTCCCAGTTTCCTTCACTGATGGGCCTCAGGCTTC Gene BVT0102_162732 + 0 NULL GK000008.2:43379472-43780985 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05750 CCTAGGGTGACAAGTGTTGGGGAAACCTACAGATCAACAAGATTCTACTGAGACACTTTG Gene BVV0101_087540 + 1 EMBV3_24704 GK000003.2:17434502-17495201 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26668 CTGGTCTCTGGACCCTCTCTTCATGGGCGCCTTTACTGAGTTCACACCCTATCAGTTTGT Gene GeneID:782545|LOC782545:XM_002686529:731_cdna Constitutive 0 NULL GeneID:782545 3 GENE LOC782545 NULL similar to L-amino acid oxidase 1 EMBV3_11687 GACGGGCAGACCTGGACTCACCTATCAGGAAGCACTTGAGTCAGAAAGAAAAGCGAGACA Gene GeneID:100337139|LOC100337139:XM_002696721:141_cdna Constitutive 0 NULL GeneID:100337139 21 GENE LOC100337139 NULL BAZ1A protein-like EMBV3_15358 CCTGAGCAGAGAAAAGGCATCCTGAAAAACAAAGTCACCTATCCGCCACCGCTGACCGAA Gene GeneID:522422|CELSR1:XM_002688015:178_cdna Constitutive 0 NULL GeneID:522422 5 GENE CELSR1 NULL cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila) EMBV3_13570 GTGCGGTAACACTCAGAGCTGCCCTTCTTGTAGCCCCTTGCCTAGTACTGATAAAATTCC Gene GeneID:789151|LOC789151:XM_002693340:243_cdna Constitutive 0 NULL GeneID:789151 15 GENE LOC789151 NULL similar to Olfactory receptor 52A1 (Olfactory receptor OR11-319) (HPFH1OR) (Odorant receptor HOR3beta4) EMBV3_12913 CCTCTTGGGAAGAACGGGACCGCATGATTCAAATTTATTTCCCCAAAGAAGGCCGTAGAG Gene GeneID:532044|MRPS22:NM_001046319:48_cdna Constitutive 1 NULL GeneID:532044 1 GENE MRPS22 MGC134364 mitochondrial ribosomal protein S22 EMBV3_02766 AGACAGCGCTCCCTTCGCCCTCATCATGATGCTTCTACATTTACCATCAACATTGCACTC Gene GeneID:533642|PLOD2:NM_001101149:44_cdna UTR3_Alt 2 NULL GeneID:533642 1 GENE PLOD2 NULL procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 EMBV3_11171 GGTTCTCTTCTTCATCCCATCACCTCCTCACTCTATGCTGCCATTCACGCGTTCATTGAC Gene GeneID:100139678|BOSTAUV1R436:XM_002697081:610_cdna Constitutive 0 NULL GeneID:100139678 22 GENE BOSTAUV1R436 NULL vomeronasal 1 receptor bosTauV1R436 EMBV3_23959 AGGACTTCCGGCAGCAGATGAAGAATTATCCAAAAGACAACCAGACGGCATCGATCCTGG Gene GeneID:404156|CD63:NM_205803:926_cdna Constitutive 1 NULL GeneID:404156 5 GENE CD63 NULL CD63 molecule EMBV3_37830 CCATGGATCTTCCCATGGCTGTTGGAGACAGAATTCATTGCCTTGACGTCTTACTTGCTT Gene GeneID:507516|SCN7A:XM_002685371:281_cdna Constitutive 0 NULL GeneID:507516 2 GENE SCN7A NULL sodium channel, voltage-gated, type VII, alpha EMBV3_15104 TTGTCTCTGCCTACAGCGTTGCCCTCAAAACCCCGACCTCCTTCTTGGAGGGAGTGGCAA Gene GeneID:326346|NDUFA11:NM_175718:12_cdna Constitutive 2 NULL GeneID:326346 7 GENE NDUFA11 b14.7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa EMBV3_41035 GGCTCTGCAGGCACTGAAATGCTGAACTGCTTCTAGGGTCCATTTTATATGATTACTCAC Gene GeneID:768209|SFRS18:NM_001078097:11_cdna Constitutive 0 NULL GeneID:768209 9 GENE SFRS18 MGC143336 SRRP130 splicing factor, arginine/serine-rich 18 EMBV3_31321 CCTGGCCAAGAAACAAAAGCAGAATCGTCCCATTCCTCAATGGATTCGAGTGAAAACTGG Gene GeneID:100296475|LOC100296475:XM_002697756:278_cdna Constitutive 0 NULL GeneID:100296475 24 GENE LOC100296475 NULL similar to ribosomal protein L39 EMBV3_20648 CATGAGGACAACACCCAAACAGGTGGGAACAGCTAAGCAACACATTTCTTCTCGGTGTCC Gene GeneID:100271834|C27H8orf48:NM_001145540:81_cdna Constitutive 0 NULL GeneID:100271834 27 GENE C27H8orf48 NULL chromosome 8 open reading frame 48 ortholog EMBV3_36148 TAGGATGTTGTGACTTAGAAAAAATAATACAGATGTCTTCCCCCCTTTTGTAGCTTTGAC Gene GeneID:505019|SR140:XM_002685036:95_cdna Constitutive 0 NULL GeneID:505019 1 GENE SR140 KIAA0332 U2-associated SR140 protein EMBV3_16882 TTTATAAATTAAGTATAATGTTGAGTCCTACAATTCATGAACATGGTATAATTTTCCATT Gene GeneID:614918|HMGN4:NM_001046547:146_cdna Constitutive 0 NULL GeneID:614918 23 GENE HMGN4 MGC133874 high mobility group nucleosomal binding domain 4 EMBV3_07578 CTCTCTCAGAAGGGTGCAAGGAGAAAACCTAAACTTCAAGATCAAACTGACCTCGCCCCG Gene BVT0102_188641 + 1 EMBV3_34152 GK000010.2:102887016-102920825 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24376 TATCCTCCTCGGAGAACAACACACTGACCTCTTCCAATACCTACAACAGCCGCTACTGGA Gene GeneID:540003|IGSF11:NM_001076921:107_cdna Constitutive 0 NULL GeneID:540003 1 GENE IGSF11 MGC142790 immunoglobulin superfamily, member 11 EMBV3_05701 ACCTGCGCATGCACCGCCTCTGCACCGCAGGCCTGTCCAAAAAGAAGCCGGAGGCCCCCA Variant GeneID:507699|HIF3A:NM_001105342:151_cdna 233^463 1 EMBV3_28632 GeneID:507699 18 GENE HIF3A NULL hypoxia inducible factor 3, alpha subunit EMBV3_40266 GCTCGAGAAGGTAGAGGAGATGGCGCAGGGGACACGGGCTAAGACTGGGGGCTCCCGGGA Gene GeneID:100313087|MIR877:NR_031221:11_cdna Constitutive 0 NULL GeneID:100313087 23 GENE MIR877 bta-mir-877 microRNA mir-877 EMBV3_06180 ACTGAACAAGACCAAATCACTGGTTGTGAGCGTGAAGGGTGTGTCCAGTGTCCTTCGATG Gene GeneID:515219|MAFG:NM_001098980:90_cdna Constitutive 0 NULL GeneID:515219 19 GENE MAFG MGC148439 v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian) EMBV3_43436 TTGCTGCCTATGGGCTTTCTCTAGTTGCGGTAAGCAGGGCTACTCTTTGTTGCTGTGCAC Gene BVV0102_156868 - 1 EMBV3_03169 GK000008.2:76531322-76540580 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08001 AAAAGTAGGTGGTGGGAGTCAGGGTGCTGGGAGTAAGTGCTTGATGGGGACAGAGTTGTA Gene BVV0102_224357 + 0 NULL GK000007.2:19843118-19846023 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17734 GCTTCGAGCCGCTGCGCTTCGCCTCGTCAGAAAACACTGAAGATCCAAGATGTCGGGTTG Variant GeneID:399560|MRPL12:NM_201606:39_cdna 103^289 1 EMBV3_25024 GeneID:399560 19 GENE MRPL12 NULL mitochondrial ribosomal protein L12 EMBV3_27834 ACACTGTAGTGATAGAAAACAAATTAGGAACATAGATAGCACAAGTAGGACAAGGAGGAT Gene GeneID:613678|LOC613678:XR_083756:64_cdna Constitutive 0 NULL GeneID:613678 9 PSEUDO LOC613678 NULL similar to cleavage stimulation factor subunit 3 EMBV3_26090 ACAGTGACCACCCTGCTCTGGATGGAAATAGGAATATCATGTCTTGCCGGGATGGCGGTT Gene GeneID:528412|LOC528412:XM_002691939:2_cdna Constitutive 0 NULL GeneID:528412 12 GENE LOC528412 NULL similar to LOC616707 protein EMBV3_02161 GAAGTGCTCCCCTGGATATACAGCAAGATGGAGAGGGAGATGCGCTTCCGGAAATCGTAA Gene GeneID:529120|TMPRSS13:XM_002693003:190_cdna Constitutive 0 NULL GeneID:529120 15 GENE TMPRSS13 NULL transmembrane protease, serine 13 EMBV3_35350 GGACCTCCTCGCCAAGGAGGAAGAATATAAACATCCATTATCTGAAGGGACAGTTCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02803 AATATAGCAAGCTGGTGGAGACCAAGGTGCTCAGGACACCCATCCAATCATTCTCCTGCC Gene BVT0102_086008 - 1 EMBV3_41649 GK000018.2:26823808-28446206 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21064 GTCTCATGATCACTTGACCTTGTCCTTGAGCCTTTGCATGGCCTGTGCTCTCTAACCAGC Gene BVT0102_077972 + 1 EMBV3_20938 GK000023.2:52143600-52288935 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133746 TCONS_00133745 1 XLOC_081196 NonCoding TCONS_00133745 XLOC_081196 NonCoding NonCoding - 23:52144147-52145303 - TSS99825 1063 1 TCONS_00133745_3 67 0.417685794920038 2 0.0813852813852813 0.000243185881361188 2.32161505502782e-09 6.94877416118424e-09 5.8630295918401e-09 3.33396757170166e-09 2.50584428214945e-09 4.14035842475381e-09 0.000784547912450459 0 0 0 0 0 0 0 0 0 0 0 0.00018224312656782 1.14231877215841e-05 0 0 0 0.000208282057528525 0 4.31230427678846e-09 0 0 0 XR_226417.1 LOC101904603 PREDICTED: Bos taurus uncharacterized LOC101904603 (LOC101904603), 0.0 998 100.00 0.51928504233302 XR_242456.1 NKAIN3 PREDICTED: Homo sapiens Na+/K+ transporting ATPase interacting 3 (NKAIN3), transcript variant X3, misc_RNA. 4e-06 57.2 78.48 0.070555032925682 0 noncoding 0 0 0 0 0.062858536548161 0.582554825711207 -0.0322881008071992 0.52261965518735 GGCTCCCCTGGGATCACGGTCACCAAAACTCCCGCAGGCCTTTCCCCGGGGAGACTGGGGGCCTGTTACCAGCAGTCACCGCCCTGCCTTGACTGCCTGGGTGAATCAGGTGCTAATCAGAGCCTTGGTCTTGGCAGCTCCCCTGTCTGGGTTTTCTGAGTGCGCCCGATTTAGGCCGGGTGGGGGGATTCCTACGGCCCTGCCCCACCCACGAAGACCGAGAAGGCTCACCCGGTGGCGAAAGGTGGGCTCGGTGACTCATCTCTGGGATGACCTCACCTCCCGACCCCAGCAGAGCAGATGTCCGGATTTGAGACCTCATACCGTGACTTTGGACGGCTAGTGCGTTCCCTTCTTCAGATTATATACTGGCTCGAGTAGGTGCATGGGTGTGTTGGTTCAGGTGCTTCTGGAAAGCCCCTGCCCTTGCTCAGCACATGGTCATGTCCGCACCGTGTCTCTGCCCGGAGTGGAGTACTCTCTAACACAATTGTCAGTGCCCTGCGCCTAGTGGACGCTTGATACTTGCTAAGTGGACAGATGCATCTCTCTGGTACGGCTGAGCTCACCGGGATGACCTCATTTCATCCGCTCCTCCTTCCTCCCAGAGTCACAGCCACGCAGACTTTCTGTGTTTCCTTGAACCTGCCACCCTTGGTCTCATGATCACTTGACCTTGTCCTTGAGCCTTTGCATGGCCTGTGCTCTCTAACCAGCTGTCTCACTGTGTCACTGGCTCTTCTCTTCGAGGTCTCAGCTCAAATGCCGCCTCCTTAAAGAGGTTTTCCTAACCACCCAGTCCAAAGCAGATCCTCCAGTCACTCCCATATTACTCTGTGCAGTTTTCTTCATAGCACTTAACATGATTAGACACTCTCATGTTTATTTATTTTCCTATATCTCACTAGAACACCCTCCAGAGGAAAAGGGCCTGTCTTTTAAGGGTCGGTTTTATTCATATGGCCAGGAGCAGCGCCTGGAACAAAACAGGTGCTCGAAAATATTGTTGAATAAATTAACGAATTCCAGAGGGCTGAGAAAACAGTCGTGTGGTTCTAAGGAG TCONS_00135517 r 5' 501 TCONS_00135517 r 5' 501 EMBV3_04017 GAACAACTGCTCTTATCACCTGAGGCCACCAAACAGGTCAACACCAAGCTCATCCCCTGT Gene BVV0102_089497 + 1 EMBV3_12856 GK000024.2:949139-1018252 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14595 GTCATTTGCATCTTAGCCACAGGAATCCACAAGAATGACCTCCAACCTCCACCCGTGTCC Gene GeneID:404547|TREM1:NM_206970:228_cdna Constitutive 0 NULL GeneID:404547 23 GENE TREM1 TREM-1 triggering receptor expressed on myeloid cells 1 EMBV3_03704 GCCTCTTCTGGGGACCTCATGTCAGCAGGACCTGTGGGATTTTCTTTCTGTGTTGCTCTT Gene BVV0102_249472 + 0 NULL GK000016.2:49668056-49832119 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067433 TCONS_00067432 TCONS_00067436 TCONS_00067434 TCONS_00067435 TCONS_00067437 1 XLOC_041447 Coding TCONS_00067433 XLOC_041447 Coding Coding TIMM17A 16:49656379-49670286 j TSS50711 2952 2 TCONS_00067433_1 171 0.255420054200542 7 0.788220911836617 0.00188045736609128 0.000946293403078499 0.00195144051152263 0.00114491326050808 0.00129216812546603 0.000341709704012971 0.000345712423199945 0.000816556379997586 0.00066018266344378 0.000396910766636485 4.1640382227325e-09 0.000583829957822459 2.13264265647418e-08 0.000305885429460137 2.06524894555579e-07 0.000528579258879031 0.000972960167683758 0.0023657759604264 0.00203321913539699 0.00149193671772749 0.00105766492822697 0.00103193695723101 0.00107510386472105 0.00126993227857262 0.00105382111937888 0.00142961137718905 0.00116508055026573 0.000349468127802372 0.000541991457386057 0.000551955440213319 XM_586837.6 TIMM17A PREDICTED: Bos taurus translocase of inner mitochondrial membrane 17 homolog A (yeast) (TIMM17A), mRNA. 0.0 4237 100.00 0.795392953929539 NM_006335.2 TIMM17A Homo sapiens translocase of inner mitochondrial membrane 17 homolog A (yeast) (TIMM17A), mRNA. 0.0 902 80.52 0.33130081300813 TCONS_00067433_1 sp|Q99595|TI17A_HUMAN TI17A_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-A; 7e-119 338 95.91 0.994152046783626 1 coding 0 0 0 0 -1.23074856866441 0.0227409912611383 0.0132558567727602 0.783923089107132 GCCCCGCCCGGAGCCCCGCCTTCCGCCTCGCAGCTCAGTCCCCGGCCCCGATTGGCTTCAGCAGGAGGCGGCGAGCCAATCCTCGAAGAATCTAACGCTCTACTCCTGGGATCACTTCCGCTGCCGGGCAGGCCGCGCTCTGTTCGCCCGGCATCGCGGAGCCGCGGAGTCAAGATGGAGGAGTACGCACGCGAGCCCTGCCCCTGGCGCATCGTGGATGACTGCGGTGGGGCCTTCACAATGGGAACCATAGGCGGTGGGATCTTCCAGGCAATCAAAGGCTTCCGCAATTCTCCAGTGGGAGTAAACCACAGACTACGAGGGAGTTTGACAGCTATTAAAACCAGGGCTCCGCAGTTGGGAGGTAGCTTCGCGGTTTGGGGAGGCCTGTTTTCCATGATCGACTGCAGTATGGTTCAGATCCGAGGGAAGGAAGACCCCTGGAACTCCATCACAAGCGGTGCCTTAACCGGAGCCATCCTGGCGGCAAGAAACGGGCCAGTGGCCATGGTCGGGTCGGCTGCCGTGGGTGGCGTTCTCCTGGCTCTCATCGAAGGGGCTGGCATCTTGTTGACACGCTTTGCGTCTGCACAGTTTCCCAACGGTCCTCCGTTTGCTGAAGACCCCTCCCAGTTGCCTTCCGCCCAGTTACCAGCCTCGCCCTTCGGGGAGTATCGGCAGTACCAGTAGGACTTCCCTCCCGGACTTCTACAGAGTGAGCTCAGTCTAAGGAAGGGTGTCAGAAGACCAGGTTCAGTCTGGTTCTAAAACCGCAGGGGGGACAGCTGTGGCCAAACAGGCTGTGAAGAGACTTTCAGCACCTTTTTCTATTTAAAGGAACGTGGTCGGGGTGGCGGGTGGGGTGGGGTGGGAATCTTAAAAGATAATACATTTATTTATTCACACTTGGATTGCATTTGTGATCAAAATAAATGTCTAAAATCCTTAGAAGGAAATACAGTGAGTGCTTAGAAGATGAAGGACCGCACGGCAGACAGCCACAAAGCGTGACTTTCCTCGGGGGCTTCTCGGCCTGGCTTTGCTCTGTTAGTCAAATAATAAAAAATGCCTGGAGGTTGCTCTCTCTTTTAGGATGAGTTGTAGACTTCTACTTTTCATCCTCAAATTCCGACAAGGCAGAGTCCACTGAAGACGGCACGCGGCGCGGTGGCCTGTGGGTCGGTGCACAGCGCGCACCGCCCGGCTGGCGCCGCTCGGCCTTCCCTCTGCGGGTGCAGCTGCGTCCTGGTTCATGGGTGTTGGCGGCAAGACGCGAACTCTTCGCCTTCAAGGCTGCTGGGTCTCGATTCTTAATCATCAGCAAAGCTTCCTTCCCGTAAATCCAGCTCTGTGTCAGAGGTTCACGGAGCAGCTGACAGCGCTGGAGAAGTCTGATGTTTGTTGCTGGAAAGTTTATAAAGTCCAGGTGGTTTTTAGTGTGTTACAAGTCCTTGAAGCTGATCTTTGTAAGGGTGTCCTTTGGGGTCTGGCTGGGACTAGAAGACAGATGGGCTGTTCAGAATCGGCCACTTTACTGGTGGTGAAAATGCCACGTGGCCTTCCAGAAGGCAGGCTGTGGCTCTCTCCCGGTTGCCTGCCTGGTGTGACTGCCTTGTGTGGTGAGCTCAGTGCTACATATGTAGCAAGCATTTAATTTACTCATCCTGGGTTGAGCTTTGTTTGTGTGGTAAAATACACAGGAAGTCATGTTTCTTTTAACCATTAAGTGTACAATTTGGTGGAATATAAATACAGTGTATCAACCGCCTTTAGTGTCCCAGAACTTCTGCAGCAGCAGGAGCAGAAACTGGGGGATGGTAACCACCGCCCCACTCCCCAGCTTCTGGTAGCACAGGACTGTGCTCCGTCTGCGAGTCCGCCTCTTCTGGGGACCTCATGTCAGCAGGACCTGTGGGATTTTCTTTCTGTGTTGCTCTTCATTTAGGACTTCATTCATGCTTTCTGACGGTTGAGTAACAATACTGCATTGTAGGCAGAGACCACGTTTTATTTCTCCATTCTTCCGTTGACGGACATTTGAATGATGCTGCTGTGGACACGGGCATACGGCTCCCTGAGCCCCTGCTCCTTTTTCTTCGGGGCACATTCCTAGGAGTGGAACTGCCGTGGGTGTGGTAACTCTGTTCAGCTGCTGAGGAAGCACCACGCTCTCCCGTAGTCGCTGCACCACGCGGCATTTCCACCAGCAGTGTGCAGGGCTCCGGCTTTCCTACACTCTCGCCAGCGTTTTTCCTCTACAGCCAGGCCAGTGCCTGTGACGTGTCTCTCATTGTGGTTCTGACTTGCGTTCTCCTGGTGACTGACGATGCTGTACTTTTTAGCCATTTGATGGCAGGTGGGAACCCAGAAACCTTCCTAGTTGTTTCCCAGCTTCTTGCTTCCCGTGGATACCTCTGTCTGCCCCAGGCTTAGAAGGACTTCTGTTCTCAGAAAGCCTGGCTGCCCCCTGCCCGTCCCTTCCCCCGCTGGAGCTGGCCCAGAGGGCAGTGGGTCCCTCTCTCACATGTCCAGTGCAGAGATAGGGGGGTGAGGAGGGAGGGCAAGGGGGAAGGCAAGCGTCACCCCTCAGTCTCCTCCTGGAAGGCTGGTGCCGTCATTTCCAGGCAGGGGAGCGTGTCCTCCGGCCATCCATCGGTGGACACACCCGTGCCCGCCCCTGACCCCCGCCCGTGTACCCTGCTGGCTGCTTCTTGGTGATTCGGATTCCCCCTCCTCCTTTCCCCCAACATGTTTTCAATGAAAATAGCAAACCTGTAAAGTTGGGGTTCACAGTGAACACGTGTGTACCCAGCACCTAGATTCTATGACTGACTTTACAGCACTTTACCATTGCCTGCCTGGTCACCTGTCCCCTGCTTTCTAATAAAATTGAAGTTTATGAAATCCATTGATAAGCATTGTAAGATGTGATTATTTTAAAGTTTAGAGAAT EMBV3_36530 GTCTTGATGGAGGAAACAGCCCGATGATCAAGCCCAAAGGAGACAAACAAGTGGAATACC Gene GeneID:540085|GAB1:NM_001101201:50_cdna UTR3_Alt 2 NULL GeneID:540085 17 GENE GAB1 NULL GRB2-associated binding protein 1 EMBV3_04788 TCTGTGAGCACGCAGCCATTGTTGCTGTTTCCTGCTCTGACCCCTACATTAACCAGGAGA Gene GeneID:787369|LOC787369:XM_002696857:59_cdna Constitutive 0 NULL GeneID:787369 22 GENE LOC787369 NULL similar to olfactory receptor Olfr1174 EMBV3_32202 ATCCTCATCAACAATGCCAGCGTGAAGGTGAAGGGACCTGCCCATAAGATTTCTCTGGAG Gene GeneID:511943|DHRS7C:NM_001075545:15_cdna Constitutive 0 NULL GeneID:511943 19 GENE DHRS7C NULL dehydrogenase/reductase (SDR family) member 7C EMBV3_00919 AAGTCACCCAAACTCCAAGACACCTGATCAAAACGACGGGACAGACAGCGACCCTGAGAT Gene GeneID:100336899|LOC100336899:XM_002687105:410_cdna Constitutive 0 NULL GeneID:100336899 4 GENE LOC100336899 NULL hypothetical protein LOC100336899 EMBV3_34957 AACCAGGGCGACCAGTTTGACTTCACCTTCGTGGAGGTCTATCGCGTCAAGAAGTTCCAG Gene GeneID:100336737|LOC100336737:XM_002688017:184_cdna Constitutive 0 NULL GeneID:100336737 5 GENE LOC100336737 NULL ceramide kinase-like EMBV3_04542 GCGCAGGTTCAGTTTCTGGTTAGGTCACTGAGGTCCCACATGCTATGAAGCACAGCCAAA Gene BVT0102_253708 + 0 NULL GK000007.2:47541200-47549843 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213261 TCONS_00213263 TCONS_00213260 1 XLOC_130416 Coding TCONS_00213263 XLOC_130416 Coding Coding UBE2B 7:47529324-47545075 j TSS159817 4653 1 TCONS_00213263_3 119 0.062970126799914 6 0.704952380952381 2.64181678680951e-30 2.91486400613577e-33 4.74363586507971e-05 0.000314609525870069 0.000782165529618084 3.90273370274232e-06 1.12957836874519e-10 0.000224899841359923 0.00133809008556067 2.00134615703711e-104 2.88508362575037e-05 0.000161925497859596 5.03534145140238e-05 8.28229602491176e-05 1.21606403417657e-42 0.00191178804442454 0.00175408057382488 0.00256369323254995 0.000293825635939601 0.000399787534242287 7.19640411690253e-06 0.000912986489756263 0.00153176112267471 0.00129441644373247 9.14309563070086e-32 8.25958948857595e-286 4.98379012800799e-33 8.6508937601127e-05 0.000146897332189156 0.000448125050094979 XM_005209340.1 UBE2B PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2B (UBE2B), 0.0 2542 100.00 0.302600472813239 NM_003337.2 UBE2B Homo sapiens ubiquitin-conjugating enzyme E2B (UBE2B), mRNA. 0.0 2334 91.15 0.356329249946271 TCONS_00213263_3 sp|Q32P99|UBE2B_BOVIN UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B; 7e-85 248 100.00 0.991596638655462 2 noncoding 1 0 1 1 -1.07958230909404 0.0147265900155146 -0.0046657506564778 0.938151195964624 CTCGGGCTGGCAAACCCGGCTGCCAATGCTTTCTGGAACTCAGCTCTGTAGCCTAGTGTATAAAGACCTATCTATAGCCTCCAAAGTCTGGAAAAATGCCTTCCTGGAGGCTGGCGCTAACCTGATACTCCCTGAGCCTCCTTTGTAAAATAGGGTTTTGTTAGATGTTAGGGTTGATGATGAGGAAGTGACTTTTTTCCCCCCAGTTGTTTTACTTTGAATGCTTACAGATTGCAAGAGGACCCACCTGTGGGTGTCAGTGGCGCACCATCTGAAAACAACATCATGCAGTGGAATGCAGTTATATTTGGACCAGAAGGGACACCCTTTGAAGATGGTACTTTTAAACTAGTAATAGAATTTTCTGAAGAATATCCAAATAAGCCGCCAACTGTTAGGTTTTTATCCAAAATGTTTCATCCAAATGTGTATGCTGATGGTAGCATATGTTTAGATATCCTTCAGAATAGATGGAGTCCAACATACGATGTATCTTCTATCTTAACATCAATTCAGTCTCTGCTGGATGAACCGAATCCAAATAGTCCAGCCAATAGTCAGGCAGCACAGCTTTATCAGGAAAACAAACGAGAATATGAGAAAAGAGTTTCGGCCATTGTTGAACAAAGCTGGAATGATTCATAATAGACAACTGGTCTGTTAATCTTTTTCATCATTGTTGTGTATAATTTACCTCTCAGTAGAAAGGCTAACAAATTTTAAGTGCCACAGGTTTTAAGGATTCTGCAGAAAAAAAGTCCTTCAGTTTAGAACCTACAAAAGCTTGTGTATCTTGATTAATGTACTTTTTATTGCATGGTGTGAACTAAGTTATTGCTTACATAAATTTGTAATATATCCTGTTTGTATTTTTTTCCAAGTGTATAATGTTGGTGTGGAGTTTTCATGACAGAATATACACATTTTGTAAATCTGTACTTTTTTCAAATATTGAATGCCTTATTTTTGAATTCTTTAGATTTTTAAATTGGAGAAAAGCACTTAAAGTTTTTTATATATGAATATTACATGTAAAGCTGTTAAAATACATACTTCAGTGCAAGAGACTTTGTCACTTGTTTCCTTATCTAAGTAGGAGGGGTTAATAAGTCTCTAGCTCTCTATCAATTGATAGTTTCATTTCCAATTTCAAAAGAACAGATTTATATTTTATCAAGAAATTCAGATTTGATTCTAGATACCAATTACAATCTCAAACTTTATTTTGAATGTACCTTTATTAGTTTTAGTTGAGCAATTATAACTGGTTTGATTCTGTCCAACTCTGTATTTAGGCCACTTATTACTGTTTCTTCATGCACTACTTACTGTTAAACTGCACCCTTTGATTTCACAATTTGCACCTCTACCATGGGGTATTGGCACCTCTACCTTGAGCAGAGAGCTTATGCAACTTACTTTGCTGCTTGATAATACTTTACAAGATTTTTGATAATGAAGAAAGTAAAACGATCAACATTAAACAAAAATCCATGCCCTACAATTAACAATATAAGAATTTGTTGCATTGGTTTGAACAAGGCAGATATTTGGAAGGAATCTTAGTGTAATTTAAATATTTGAAAACTGCCTTTTAATGCAATTGCCTATCTGTTTGTTCTGGAAAAATGTTTTAATACCAGGGCCTGTTGAGTTGCTTTCTCTTGTGGAGATTTTTTTTTTTAATCTCCTAAATTGTATAAAAGCTGTACTGCATCTTAGTTTACTGGATAAACTTAAAACACAGTATTTGTAGAAAGCTTAATCCAAGCTATCCTATGCCTTCAAATAGTATAGAAAATGGAAAATATACAAGTAAATTCTGTTGAACCACCTGTGTAGTCTTTCTAGTAGTTAAAACAGCTATTTCATTAACCCCAAAAGTTTCTTGCACATTCATACTAGCTTAGTTAGCTAACAGCATCTTTTCTATTAGAAGATGGATTTTCTTTTCTACTGGAAGACTTAGAAGGACAATTTCTATAGTTTCTATTAAGCAGAGCTTAGAAAGGAGAAGTGCTGATGTTTCCCTTTAAAAGTTAATGCTTAGGAAATCTGGGGATAAGTGTATGATCTCAGGGAACTTTTGATACAATTGGGAGTTCACTCACTGGAATTATGCCCCCCCCCCAAAAAAAAAGATGCTGTATTTAAAGGTAGTTTTTCGTCATATCAAATGTGTGATACTTTTATATTCAGCTCTAAAATTATAGTTTCTTTAGACATTTAATCCAGTGACCGACTCTTAGATTAAATATGCAGTAGCTGTGATAGTCTCCCCTCTTAATATATTAAATGCTATTTGGATAATGCTTCAAAATCTATTTTCATCCTTAACCTGTTTTCTTTCCCGTTTCATTCTGTGCTCCCAGTACAGGGGGCGCAGGTTCAGTTTCTGGTTAGGTCACTGAGGTCCCACATGCTATGAAGCACAGCCAAAAAGTAAAAATAAGAAATTTCAAGTATTGCTAGATAGTTACAAGGAAATTATATCTTACTTTACAAAGGGTTAATAAGCTCTAATTCCTAAATTCAACACATGTGCGTAACCTCATACCTAGTCCCCATCCTACTGGAGAAAACTCTTAGGAATGTTCCATCTTTCAATTCCTCAGGTTTTTTCTTCAGCCTTGAAACAGATTGCTTATTTGGTTGAATACCAGATGTACTTCAGTTTACAAAGTCACATCATACAAAGAATGTTTACTTTGATCATTTACTACATAAAAGTTTATAAATGTATGGTATGGCAAGAGGCTAGAACTGATTTATTCATTTTAGTACAAAGTTGGATTTCATGTTAATGTTTAAGTGCATTTGTGATGTGTAATTCCTCTGTAACAATACTTCTAACACATACTGTCTGTGCAGGGCACCATTCTAAGCACTTTAATATGATCACATTTCAAACTCAAGTAATCTTATGAGGTGTGGGTACTATTGTATTACAGATAAGAAAACTTAGATACAGATCAAGTGACTTTCTCAAGGCCAACCAACCAGTATGTGATAGAGCTGGCATCTGAACCCAGGCAGTCTGGTCTTTTAGCCAGTAACTACTATTCCTTAAGAAATATTAAGGGATTGAGTTTAGTTTTAAAAATTGTACTGAATTTAAATATTCATCCCAACTTGTGAAAATTCATAAGAGTTTTGTATAGACTTGTATCTATCCAGTGAAGAGGTTTACAGCATTTTCCACCATTTTTAAAAAATGTACAAGTCTGAATATAGGAACACTATCTAGTTTCTGATAGAAAGCACTTGACTTAAAGACCCCATTTTTCCCCCCTTTGTAGAAATATCCTCGAGTCTGTACAGACACAGTCACATACACCCCCCAAAATTTAAAGATTCCATGTATATGAATAACTTTTGGGACTGATCTAAGAATTCTTTCTCATGTCGGTGGAAGGTAGTGAAGAAAGTTACTGAAGGTGACTTATTTAGTTAATAGTCTGTTGTTACGTCCAGTAAACAAGGTACCTGTCTTAATTTATTGAATTAGTACTCTTTTAAAAGAGAAGCCTGGGGCTCAAAAGTTACGTATGAGGTATTTTGATCTCAATTCCTCCAGGTTTTAAGAGAGAAAATGTTTAGGTTTTGGTGGTGGTTATTACAATTCCTTTCTGCTTCATTCAGCATTGCCGAGTCCCAAAGGAACCTGGTATGTGGGGATTGTGTATGTAAACAGAAAAGTGACTAGGTGGAAAGCTGTTAAAGGAAACTGTCCATAGGGCAGGGGCCTTGTGCAAAGACGGTAGCTCTGTCACTTCATTTACCATCTAGTTAAGCTATTGTCTGATAAGGGGAAATTTTAGTTATCTTGTTATTCTAGTATATTATATAGAGCACAAAGATATATTAGAAACAAAATTTTGTTTGAAAGAATTGAGTTTTTCCTCTGTCCTTTGAAAAAATACACAGATGTGTGTGCTGTTTTGAGTTTCCTGTTCATAGCCTGGACTGGGCTTTCTTTTAGTTGGGTCCAAAAGCTGAATGAGATGCACCCTTTGCAAATCTTTCTTAGCTCAGCAACATTAGCTGGTTGAAATCAAGAGCTCTGGAAGGAAAGGCTCCAAGCTTCCTCTCTGGCACATGGGGGACTCAGACTTAGGTTAGAAGCCTGCATGGACTGTCAGGAGCTCTGCCATTGACGTAGTGCTAAGGCTTGGCCACAAGATGCTTTTGTTTACCAGTGACTTCTGGAATCGTGTGTTTGGGAAGACTAAATATAGTGTGTTCTCTGCTGAGTAAAAGGAAATAATAACCTTTTAGCTAGAGAGGTCTTTATATGGTGATGGTCTTGGTTTGGTTACAAGTGTAATGCTTCTGTAGTCTTTTGGGAGGATATTTTAACTGATCTAAAGTCTTACCTGCAAGACTGGGATCTTTCATGTACCACTGGGTTAGGAATTTTGTCTAGAGGAGACCAGAGCCTCTCTCTGAAAGGATCCACTCATCAGCCTGATCTACTTTAGTTGTCATTCTTCCTAGAAGGCAGGAGAGCATCTGTGGTGTGCTGAACGCTGCCAAAGTGCAAACGTAGCACACTTAAGGGAGACTTCTTAATGCTGCTTCCTGTCTGAAGCCCCTCTTGCTCTCTCCCGTTTACAAAGAAGGCCTTATGCCAAGAATACTGCAGCCCACCAG EMBV3_20558 AGTGTAAACTTCACCCTGAGGACAGAGGGCAGCTGTGAAGAAACTTGGCGTCCAGTTCTC Gene BVV0102_228018 + 0 NULL GJ058425.1:1-161924 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09615 ACGGTTCTGAAGCTTTTAGGTGTTGGAGAGGAAGTAGGGGGCGTTTTAGAGCTGTTCCCG Gene GeneID:515235|CCDC80:NM_001098982:65_cdna Constitutive 0 NULL GeneID:515235 1 GENE CCDC80 MGC159613 coiled-coil domain containing 80 EMBV3_24468 AAGCATCAAAGAACTTCAGTTTTACCGAAATAACATGCTGTTTTCATTTATGACACAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28082 CATGCGAAAGAGCACAAGAATCTGGCAGAACCTTTGATGACCTAGGAGACTATGGATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35390 TCTGTCCTGCCGGATCACAGCAGCTATTCCTTCAAACCGAAAACAAGATGGAAGATGTGT Variant GeneID:613798|C4H7orf53:NM_001099718:78_cdna 498^626 1 EMBV3_37896 GeneID:613798 4 GENE C4H7orf53 C7orf53 chromosome 7 open reading frame 53 ortholog EMBV3_10633 TGTGTGAGCTGGTGCTGATGGAGCGTCGGTAGTCCTTGACTTAGCTTTCTGGCATCCATA Gene BVT0102_385201 + 0 NULL GK000013.2:67559598-67570197 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046099 1 XLOC_026613 Coding TCONS_00046099 XLOC_026613 Coding Coding TTI1 13:67528403-67570274 j TSS33493 4525 1 TCONS_00046099_3 1043 10 0.892166228803439 0.000431320468028504 0.000172308076574012 0.000568254482665186 2.71723541821063e-05 1.14211378244301e-05 3.36571666970503e-27 2.8714868319922e-49 4.02263894875207e-23 3.60616726941867e-05 4.28095155625385e-16 1.20886051341286e-05 3.99940108245666e-19 1.73118027573179e-28 8.18514340610682e-28 1.08907619406389e-100 2.4416704728818e-57 4.51952693559817e-24 7.52401454428499e-39 0.000497963861374671 0.00068603747580478 8.10478941531776e-05 7.56087033293014e-45 3.5741006109763e-58 3.9535777879196e-12 0.000619990654698704 0.000278930891023084 0.000187719713635286 1.68819552200753e-36 6.68042383107117e-42 0.000149868625749484 XM_005214792.1 TTI1 PREDICTED: Bos taurus TELO2 interacting protein 1 (TTI1), 0.0 7036 100.00 0.861878453038674 NM_014657.1 TTI1 Homo sapiens TELO2 interacting protein 1 (TTI1), mRNA. 0.0 3595 83.90 0.740552486187845 TCONS_00046099_3 sp|O43156|TTI1_HUMAN TTI1_HUMAN TELO2-interacting protein 1 homolog; 0.0 1736 80.59 0.999041227229147 1 coding 0 0 0 0 -0.0394633723180936 0.709288037229398 -0.0080594907801715 0.862891506111587 GCCTCTTTGAAACTCGCTCTTGAGTAGTCCGAGAGCAGCAGACCGGGAAAAAAAGCGCAATTCGACGGCCTCCGGAAGGCGCTTTGACCGCTCGCGCCCGCACGCCGGCGCAGTGAGTCTCATCGGAACCCTTTCTCCCGCTCCCGCAGAACCTTTCTGGCTCTGGGCGGTGCGCGAATTACGCGTCACTTCCGGCGCGGCGGAGGAGGCGGGAGACTAAGGGAAAGGCTGGAAGAAGAGTTACTAGTACCTCTGGATCATCGGTGTGTGAGCTGGTGCTGATGGAGCGTCGGTAGTCCTTGACTTAGCTTTCTGGCATCCATACCTGGCATTTTGCTAGCCTGGATTAGAGAGGATTTGAGCTTCTTCCCTTCCCTGGCTTATTGGAGGTCGCAGAGACCAGGAACCTCACAGACCAGCAGTGCCCTTCCTCTCGTGGAACTCTGGGGACCAAACTCTGTACAGGCCTGCAGGATGTTTCCTCAGTGAGAGGAAGGCTGTTGCACAATGGCGGTATTTGATACCCCGGAGGAGGCCTTTGGTGTCTTGCGTCCAGTCTGCGTTCAGCTCACCAAGACACAGACGGTGGAGAACGTGGAGCGTCTGCAGGCCCAGTTACAAGCCGAACAAGAGCTCCTCCAGGAGCTCTTCTCGGAGCTCTCTGCCTGCCTGTATTCGCCCAGCTCCCGGAAACCTGCGGCTGTGTCGGAGGAGCTGAAACTGGCTGTGATCCGGGGCCTCGGCACGTTGATGCACTCAGCTTATGGGGACATCCTTCTGAATTTTTATGAGCCCTCCATTCTGCCTCGCTTAGGATTTGCCGTATCTCTGCTGTTGGGCCTCGCAGAACAGGAGAAATCCAAGGAAATTAAAATGGCTGCCTTAACATGTCTGCAGGTTCTGCTCTTTCAGTGTGACTGTCCGGACCATCCCCGCACCTTGGATGCGCTCCAGCAGAAGCAGCTGGGGGATTTGTTTGCTTCCTTTTTACCTGGACTCTCCACTACCCTGACCAGAGTCATCACAGGAGACTTCAAACAGGGGCACAGCATCGTCGTGTCTTCCCTCAAGGTCTTTTACAAGACAGTGAGTTTCATTATGGCCGATGACCAGCTCGGAAGGGTCTCAGAGGTCCAGGCAAAGTCTGCCGTGGAGCGCAGGGTAGCAGAACTGATGGTTCACAGGGAAGCCAGCTGGGTAAAAAATACTGGTGACAAGTTGACCATCCTTATTAAGAAGATAACAGAGTGCATTTCAGTCCACCCACACTGGAAGGTCAGGCTGGAGCTGATAGACTTTGTCGAGGCCCTTCTCTTAAAGTGCAGTCGGTCACTGATCGAGTCAGCTGGCCCCCTTCTGAAGGCCCTGGTGAGTCTGACAAACGATGAGAGTCCTGACGTCCAAGCCCAGTGCGATAAAGCCCTGAGGCGTTTTGCAGACGAGAAGGTGGTAGTGGGCAGCAGAGCCTTCGCTGACATCCTGTCAGAAAACCTGCACTCCCTGGCCACGTCCCTTCCCCGCCTGATGAGCTCCCAAGACGACCAGGGCCGATTCTCCACTCTCTCCCTGTTACTCGGATACCTGAAACTCTTGGGCCCCAAAGTGGACTTCGTCCTCAACTCTGTGGCCCACCTCCAGCGCCTTTCCAAAGCGCTTATCCAAGTTCTGGAGTTAGACGTGGCCGACGTCAAAATTGTTGAAGAGCGGCGCTGGAACTCTGAACATCTGAGCGCTTCTTCAGAGGCTCCAGCCGCAAGGCCCTGGGCTCAAATGCAGAGGAGATATTTCCGCTTCTTCACCGACGAGAGGGTTTTTCTGCTCTTGAGGCAGGTTTGTCAGCTGCTTGGCTTCTATGGGAACCTCTACTTGCTTGTGGATCACTTTATGGAACTGTACCACGAGTCCATGGTGTACCGGAAGCAGGCCGCCATGATTCTGAATGAGCTGGTCGTGGGAGCTGCTGGGCTGGGGGTGGAGAATCTCCATGAAAAACACACTCCAGCTGACCTGCAGGAGCTGAGGGAGATTGTGACCTCCATACTGGAAGTGTACACGAGCCAAGAAAACTGGTATTTGGTCACTTGTGTGGAAGCTGAAGAAGCGGGAGAGGAGCCGACGATGAGGTGGACGGGCCTTCAGGCCCTCGCTTCTGGTCCACACACCTGCCCACCTACCTCTTTCCCTGAATTCTCAAAGCCAAGTCCCACGGTCTGCTCCATGAACAGCAACATCTGGCAGATATGCATCCAGTTGGAAGGGATAGGCCACTTCGCACACGCACTAGGGAAGGACTTCCGTTTGCTCTTGATGTCAGCCCTATATCCAGTACTGGAGAAGGCTGGGGACCAAACCCTGCTCATCAGTCAGGCGGCCATCGGCACCATGACAGACATCTGCCAGGCTTGTGGCTACGACTCCCTGCAGCACCTGATCAATGAGAATTCCGACTATTTGGTGAATGGGATCTCTTTAAACTTGCGTCATCTCTCTCTGCACCCCCACACCCCGAAGGTCCTGGAAGTCATGCTGCAGAACTCGGACTCGAGCCTGCTTCCTTTGGTGGCAGACGTGGTTCAAGATGTCTTGGCCACCCTGGACCAATTTTATGATAAGAAAGCTGCAACTTTTGTCAGTGTCCTGCACGCCCTGATGGCAGCGTTAGTTCAGTGGTTCCCAGACGCGGGTCATCTCGGGCAACTCCAGGAGCAAAGCGTAGGGGAAGAGGGAAGTCCTTTGAGCCAGAGACCAGCAAGTCTTGAGAAAGGCCTTGAGAACCCCACCACAGCCGAAGACATCGAGCAGTTCGTGCTGAACTACCTCAAGGAAAAGGATGTGGCAGCTGGGAATGTCTCAGATCTTGATAATGAAGACGAGGAGCAGTCAGACCCTCCCGAAGTGGAGGGGGATGACACCGGTCCCCACGTGGAGCCACCACTGCCAGTGCAGATCCAAATAGCCACGGATGTGATGGAGCGCTGCGTCCACTTGATGTCAGATAAAAGCCTGAAAATGCGCTTGAAGGTCCTGAACGTGCTGGATCTGTGCGTGGTTGTTCTGCAGTCCCACAAGAACCAGCTGCTTCCCTTGGCTCATCGGGCATGGCCCTCGCTCGTACACCGACTCACCAACGATGACCCCCTGGCGGTGCTCAGAGCCTTCAAGGTTTTGCGTACCCTGGGAGGCAAGTGTGGCGATTTTCTAAGGAGCCGGTTCTGCAAAGATGTCTTGCCAAAGCTGGCTGGCTCTTTAGTCAGCCAGGCTCCCGTCAGTGCCAGAGCTGGACCAGTTTACTCCCACACGCTGGCCTTCAAGTTGCAGCTGGCCGTCTTACAGGGCCTGGGCCCCCTCTGTGAGAGACTGGACCTCGGTGAGGGTGACCTGAGTAAAGTGGCGGATGCCTGCTTGATTTACCTCAGTGCCAAACAGCCCGTGAAATTACAAGAGGCGGCCAGGAGCGTTTTCCTCCACCTGATGAAGGTCGACCCGGACTCTACCTGGTTCCTCCTGAACGAACTTTACTGCCCGGAGGAGTTCACGCCTCCCCACCCCAGCCTCCACCCTGTGCAGCTGCGGGGGGCCACCAGGCAGCAGAACCCCTACTCAGCCAACGTGCTCCTCCTGCTCCCGGAGCTGCAGTGACAGCCCTCCCCTTCCCGGGTGGGCAGGTGGATGCCAGAGGAGGTCCCTTCCCTCCCCTGCCGAGGAGGACGAGGTCGTGGGGCCGACCCCACCCTGGCGAGGGCGGCGGTGGTGGCAGCGGAGAAGACTGCCAAGGTGGATTAGACAGCCGATCGATTTATAAATTGATCGATCACACAACTGCTCAGAAATTGGATTGAAGGAAAGCAGCCGACTGTTATTTATATTTCATACCTGGTGTTTTCAAATGACATTGTCTGGCAGCTCTAAGGGCTTAACTCCTTAGCTTACCACCTCTGCGGCCCCAGCTGCCTCACAGGCCACCCCACACACACACCCATACCCGAGAGCTTGGGGACATGTGGGGCAGAGGCCTGTGCATTGTGTGTGTCCTGTGAGCGCTCAGGGGCCACGTGGAAGCGACACCCATCCACGAGTTTTCCGGTCACTGGCCGGCAGCACCAACTCACACACCTCCCTCTCCTCAAATAAGGAGATGGAACCTCCCCTGTTCTTTGGAAGGAAATGAAATAAAGGCACTTCTTGAATGAAAAGTATGATCAAGACCTCACTTTGAAGTTTGTTATTTAAATTGGGTGACTTTTTAAAAATGAGTTTATGTTTGTAAAGGGATAACAGACTCATGGTATAAAATCCAAGTGGTACAAAACACTGAGAAGTCATTCTCCCCATCCTCATTCACCAGACATCTAGTTTCCCTCTCTAGAGGCAAACTCTCCTGACAGTTGTTTGGATGCCTTTTAAGTATTTTTCAACTGTCTACCATGGATAATGGTCTACTGACGGCCATGTGGCCATGACGCAGTTGCACCAGTCAGGACTTGGCCAGCCCTGCTTCATCCCTCCCCTTCCCAGTTACCTCCAC EMBV3_40054 GGATTTGGAGAGAGTCGTTTCTTTGGGAGAAGACAGAGAAGGGCTGAAAACCAGTACGGG Gene BVV0102_079719 + 0 NULL GK000009.2:43363805-43409749 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00240268 1 XLOC_146932 NonCoding TCONS_00240268 XLOC_146932 NonCoding NonCoding - 9:43403758-43404480 - TSS179946 722 1 TCONS_00240268_1 41 0.421052631578947 1 0 0 0 0 0 0 0 0 0 0 0 0 8.9144494172857e-05 0 0 0 0.00102427121077072 4.59897493305615e-05 0 0 0 0 2.05558701968894e-05 0 9.28789651689933e-05 0 0 0 0 0 8.32721207229443e-06 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 5e-28 129 78.62 0.182825484764543 0 noncoding 0 0 0 0 0.0674054522610109 0.616945960548466 0.00536055369495173 0.953711629641509 GTGAGCGGACTCGGCAGTTGCAGTTCCTGGGCTCTGGAGCACAGGCTCAGTAGTTGCGACGCACAGGCTCAGTTGCTCCACAGCATGTGGGGTCTTCCCAGACCAGCGATCAAACCCGTGTCTCCTGCATTCTTTACCACTGAGCCACCCAAGATGATTTCTGAGGCCCCATTTGCCTCTGAAACTCTACCTCAGTTTCCTCACTTGTAAAATGAGCCTAAGAATGGTGTCTGCCCCCTAAGCTTGTTAGCTTATGTCCACTTAGTAGAGCTCTTAGCACAGCCTCTTCCATGGTGTAGGCAGCTGTCTTTTGCATTGAGTCTTTGTGGAGTGGCAGAGCACTGGGCAGTGTGGGGAGGAGGTGGAAGGGAATGGCACAGCAGGGCTTCCGCCTTCCAGGGGTGCCCAGGTGAGCTGGGGAGCCCCTCAGCTCACCCACCAGAAGCCCATTAACAGGCCCCCTTACTGGTTTTCAGCCCTTCTCTGTCTTCTCCCAAAGAAACGACTCTCTCCAAATCCTCGCATCAAAATCTGCTTCTAGGGGAATTTAAACTAAAATAAAAAGTGATACAGAGATTTTCATGATACATTAAGCCAAAGAAGCAAAGAACAAGGATATTAAACCTTTTAGTCTCAAGATCCCTTTTTACCTTTAAAAATTATTTAGGACCCCCAAAGAACTTTTGTTTATATGAGTTCCTGTCAATATTTACGTGGTAGAA TCONS_00235334 . 5' 5258 TCONS_00235334 . 5' 5258 EMBV3_03966 GTACCCAGTCCAAGGAGGCCTTTGCCATTGGTGCTCACCAGGCAGCAGCAGGAGCAGGCT Variant GeneID:534046|UCKL1:XM_002692400:337_cdna 324^430 1 EMBV3_24612 GeneID:534046 13 GENE UCKL1 NULL uridine-cytidine kinase 1-like 1 EMBV3_00671 TCAAAAATATCGATAGTTGTAATCCTCATTCTTTCAACTATGCCAGCATGACTGGTATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23969 GCAGGAACTGTGTGGCCGCTGCAAAGACAAGAGATTCTCCTGTGGCAGTATTTACAGCTT Gene GeneID:616037|ZAR1L:NM_001127440:208_cdna Constitutive 0 NULL GeneID:616037 12 GENE ZAR1L ZAR1-LIKE zygote arrest 1-like EMBV3_40345 TAGGCGAATCTGGCCTCGAGACGTGTTGAAGAAGGTCTCTCGAGGTCTTTCCCGGGTTGA Gene BVV0102_054876 - 1 EMBV3_32756 GK000006.2:17831768-18335030 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033204 TCONS_00063808 TCONS_00131535 TCONS_00240372 TCONS_00149038 TCONS_00149042 TCONS_00210949 TCONS_00054133 TCONS_00131537 TCONS_00218950 TCONS_00147823 TCONS_00186557 12 XLOC_019438 XLOC_038534 XLOC_080240 XLOC_147036 XLOC_090915 XLOC_090919 XLOC_129459 XLOC_031942 XLOC_080242 XLOC_132269 XLOC_089710 XLOC_112609 NonCoding TCONS_00186557 XLOC_112609 NonCoding NonCoding - 4:28981025-28981694 - TSS138925 669 2 TCONS_00186557_2 107 1 0 5.04003842825042e-05 1.65220881881981e-05 2.6347800294678e-05 7.67128918004173e-05 8.04618190590629e-05 6.67340001743376e-05 5.02366887481601e-05 3.23543833301851e-05 0.000114776353102677 0.000100904156947909 2.52179144529941e-05 5.85168111144673e-05 9.65431640714993e-05 0.000139283126129092 0.000217891737511642 0.000570913133593805 0.000109102723715775 0.000139862620326037 5.3594374410669e-06 0.000294426402091814 6.63550157869369e-06 4.15164045014223e-05 9.51539900942328e-05 5.25334629035089e-05 1.81238148793375e-05 3.33537756756119e-05 2.66257992959201e-05 1.82949026561345e-05 0.000135697002898516 9.73582836758597e-06 XM_002698950.2 FRMPD2 PREDICTED: Bos taurus FERM and PDZ domain containing 2 (FRMPD2), 3e-11 73.4 78.32 0.212257100149477 0 noncoding 1 0 1 1 -0.00615637206504964 0.968424672851612 -1.02613056179786 0.00497382998682155 CAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGCTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAACACGAAGGGGCAGTTTTTCCGTGCATCGTTCGGAAAAAACCCCAGGTTCCAAATACAGCTCGACAAGCGGCCTCTCTCCCCGGGGACATCTCGAGAGGCAAGCGGAGTTCCATGCCTCAACCCAAGACGAGGCCTGACTCTCCTGTCCCCAGTCTGCAGGGACCCTGCGATCGGAGTCTGAAATCAGAGGTACCCTGCGGTTCCTGCCTCAACTGGAGATGAGGCCCTCTTCCAATGCACCAAGCCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGGCTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGCCCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAATGATGCGCTCCCCCTCGCCACTCGCA TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 EMBV3_21353 AGTTTGATGACCTGGTGTCGGCCCTGCGCTCCGGAGAAGTTTTCGACAAGGACTTGTGCA Gene GeneID:783665|DAAM2:XM_002697225:33_cdna Constitutive 0 NULL GeneID:783665 23 GENE DAAM2 NULL dishevelled associated activator of morphogenesis 2 EMBV3_16577 TCGGCAGAGGGACCTTGGAGCAGCTGACAGACCTGGAAGCTGCCTGGCGCGTGCCGGTGT Variant GeneID:100298830|LOC100298830:XM_002684000:2_cdna 836^910 1 EMBV3_11394 GeneID:100298830 Un GENE LOC100298830 NULL similar to pseudoautosomal GTP-binding protein-like protein EMBV3_33345 TGAGGGAGAAGCAGAACACCAGGATCAGCTTTGAGGAGACGGAGGAGGATGTCATAGAGA Gene GeneID:618673|KIAA1984:NM_001035502:47_cdna Constitutive 1 NULL GeneID:618673 11 GENE KIAA1984 MGC134332 KIAA1984 EMBV3_24877 GCCAGTTTACCGGAGCCATGAGGAAGTCTGCGTGTGTCTTCTCATCTCCTCGACTGTTAA Gene GeneID:514822|GSTZ1:NM_001075686:111_cdna Constitutive 0 NULL GeneID:514822 10 GENE GSTZ1 NULL glutathione transferase zeta 1 EMBV3_21490 AGAGGAACATCCGCCTGGATCTGAGGAGAGAATTAGAGCCTGCCCTGCTCCCTAGGACCT Variant GeneID:507549|TIMD4:NM_001075320:2_cdna 420^701 3 EMBV3_12081 GeneID:507549 7 GENE TIMD4 NULL T-cell immunoglobulin and mucin domain containing 4 EMBV3_17636 TGCTGCTGAGCGAACAGTGGAAGATGTTTTCCTTCGCAAATTTATGCTGGGCACCTTCCC Gene GeneID:617466|MRPS24:NM_001046601:47_cdna Constitutive 0 NULL GeneID:617466 22 GENE MRPS24 MGC137549 mitochondrial ribosomal protein S24 EMBV3_05301 ATGCTGTCTGCTCTGGAAATAATGTATTTTGATTTTAGTCCCTACCTCCACCCCCAAACC Gene GeneID:540361|NKAP:XM_002699472:53_cdna Constitutive 0 NULL GeneID:540361 X GENE NKAP NULL NFKB activating protein EMBV3_40017 AGGGTCACACTGCCTGCTGTGGCCTCCCAGCCTCACTACCAGCACCAGTGGCTAGAGGCT Gene GeneID:100295097|LOC100295097:XM_002698505:610_cdna Constitutive 0 NULL GeneID:100295097 26 GENE LOC100295097 NULL hypothetical protein LOC100295097 EMBV3_05133 AAGCCAACTCACCAAGCTGGGGAAGCCATTTAAGTACATCGTGACCTGTGTGATCATGCA Gene GeneID:782237|LOC782237:XM_002685097:65_cdna Constitutive 0 NULL GeneID:782237 1 GENE LOC782237 NULL similar to Dynein light chain Tctex-type 1 (T-complex testis-specific protein 1 homolog) (Protein CW-1) EMBV3_20890 AGTCCATGCTCTGTAACTAGAGAAAAGCCCGAGCAGCAGTGAAGACCCAGTACAGCCAAA Gene BVT0102_045683 + 0 NULL GK000004.2:64324413-64352699 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35589 CAAGAGCTTTATATGTGGCACACAGCAGAAGTCCATGTACAGAAGGGCTCTATTCCAATA Gene GeneID:282331|PTGER4:NM_174589:62_cdna Constitutive 2 NULL GeneID:282331 20 GENE PTGER4 ep4 prostaglandin E receptor 4 (subtype EP4) EMBV3_39418 ACGGGCAAGAATGAGGCCCAGCAGAAATCAGAGCTGGAAGATGGCACCCCCCGGGCTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16232 CATATATGCCCGATGAAAGCTTTTCTGAGAGGTTCCTAACTACAGAAAGAAGGGCAAGGA Gene BVV0102_199208 - 1 EMBV3_00451 GK000001.2:111331242-111445586 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40493 GGGTTTGAAATAACCGAGCGGGGTGAAATCGAAGTGAAAGGGAAAGGGAAGATGACCACC Gene GeneID:510388|LOC510388:XM_002691742:241_cdna Constitutive 0 NULL GeneID:510388 12 GENE LOC510388 NULL similar to soluble guanylyl cyclase beta 2 subunit EMBV3_35926 CCTTTGTAGTTTGTTTTCGCCCAGATGAATCTGCATTCATTTGTATTTTTTCTATGTATC Gene GeneID:538525|YTHDF1:XM_002692405:351_cdna Constitutive 2 NULL GeneID:538525 13 GENE YTHDF1 NULL YTH domain family, member 1 EMBV3_16804 CCGTGTGAAGACCTATACGGACGAGCTAACGCCCATTGAGTCTTCTGTGCCTGTGTACAA Gene GeneID:287327|NDUFS3:NM_174819:24_cdna Constitutive 1 NULL GeneID:287327 15 GENE NDUFS3 NULL NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) EMBV3_03649 TAACAGCCTGGCACCTGTCTCAAGCGATCTTAGAACCGACAGGAAAGGGTTAGCTCTGGT Gene BVT0101_018496 + 0 NULL GK000015.2:77643888-77663789 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060126 TCONS_00060125 TCONS_00060127 1 XLOC_036590 Coding TCONS_00060126 XLOC_036590 NonCoding Coding - 15:77653899-77663603 - TSS44991 2405 1 TCONS_00060126_3 204 0.0561330561330561 4 0.752550757497681 0.000412961478667908 0.000405268434717704 0.000361694111192167 0.000478915950449371 0.000533639675488616 1.22746956127495e-05 0.000103929538788403 0.000437762905116862 0.000577999507365386 1.03970890668829e-95 0 0.000146564317758836 0.000353142597513643 6.90568978709248e-05 2.24399679239919e-05 0.00103762916951921 0.000522005674961223 0.00179394551187642 0.00140205260869525 0.00281677387438845 0.000815474714431373 0.000478010335366003 0.000156305497122338 4.83026304343429e-05 0.000397891859831083 0.000881781844859285 0.00044097183481547 4.20594760221943e-33 6.58441638282963e-05 1.46975028474948e-55 NM_002334.3 LRP4 Homo sapiens low density lipoprotein receptor-related protein 4 (LRP4), mRNA. 2e-165 587 86.71 0.203742203742204 0 noncoding 0 0 0 1 -0.0180351524412445 0.907956478481355 -0.000444498790345721 0.992919959775047 GGGAGGTCACGGGGCGAGAAGCGAAAGATTGAGACTGTCCTGGAAGAAAGATTTCCTGGAAGGAACATAAATACAAGTCTCGGGCCAGAAAGGACCTCAGCAATCACCTGGTTCAACCTTTTCATTTTACTGATGAGGAAGCTAAGAGTGAGCATACATGAAAATAGGGTGCTAGTCCCTGACGCTGTTACAGAATTCTCACTTGCCACTCGTCAAATTCTTGTCAAGAACTGGGCCATCAGGCCAACACTGTTCTCCTCTGCCACCTCCTGCTGAGACAGCAGGACAATCACAGGTTCTTCCTGGCTCTAGTGGTCACCGTTCATAGCCTTGGCCTGTAATTCTGAGGCTCTGGAAGGGGGCACTTACTACAGAACCTCGGGCAGCCATGACCAACCAGAGTTGGCACTCAGAATGAAACCTACCAGCCACCCTGCTCTAGAGGACATCAGGATTTCAGAAGCCAATGAACTCTGGTCTTAACCTGTCTTCTCAAGATGAGCTGAAGCTCCAGCCAGGAACTTCCCACCCTTTATCACTCTTCATATCCCCCAAAGGGCTTAGTGGTGATGTCTGAAAGCAGGTCTCCACCGCATGTTTCAGACAGAGCAGGTGCAGTTACTAGTCATGACTCCAAGCCAGGCAAGGTGATTAAGAAAAGCTAAATTTATATTAAATTATCATGAAGTCCTAAAATACTGAACATAGTGGTTAAATAACTCCAGAAAGTCCAATCTCTCCAGTGAGTAACGTTAAAACCATTACACGTGAGCGTGGGAGAATCACTTCCATTAGTTTAGGACAGAGAGATTTTGCTTTTTACATAGTAAATCAGTGCTCAAATAGATATTTCTTCAAATATGTCCTTTCTACATTCTGAACAGCCCAAGTGCAATAAGATCCTTCCCCCTTTCCACATGAGAAGATACCGTTTGGCTACTTTCTCTCCGCATCCCCAAGCCGCGAACCCGAGGACCCAAAGTGCTCCTTCTTCTACTGCCCCGTCAAATGTGAAATGCCCCCCTTTCCTCCCAGGAGGGGGACCGACCTTTTCCTGTTTTGTGTTCTGGGAAATCCTGCTTGGCCTGGCCTGGCTGTCCTTTGAGGGTCCAGACCTGAGGCTGGCTACTGAGAGCAGGGCTAACAGCCTGGCACCTGTCTCAAGCGATCTTAGAACCGACAGGAAAGGGTTAGCTCTGGTCTTCCCTTTTCACTCACATGTTTGGCGGCTGACTTCTCAATGCCAGGAACCCCAGGACATGCTTAAAATTTGGAAACTTACCCTCAAGGCACCCCCATCCATCCTCAGCTCCTGTTGTGGCTTCTCATCCCTGGGTCAAAGAAGTCTGGGTGTGCCCTGGGCTGAAAGGGCCTCCTCATTGTTTCTCTCTACTTTTCTATTCCTTGCCCCCCACAGACACACACACTTCGCATCTTTATTTAGGCCTCTTCACCACAGGTGCCCACAAGGCTAGATCAGAATAAGCACATTAGGCACCGAAAAACAAACAAACCCAGAAGAGCTAAGTAGAAGTTTAGGACAATAAGAAGTCTCAATTCCCCCAACATTTGTGTGACACACATGCCTTTTCTGTGAATAAGCATGAAGCCAGTGATGGCATTTCAGCATGGAATGGGAGTCACCTAGCTGGGAGGACTCGGAGTGGGTACTTCACCAGCCCCAGCTGCAGGCTCTCTGTTTACTCGCTTAGATCCCTGAGCACCTGAGAGAACGCAGGAGGCTCAGCCTCATGGACACTTCACTTTAGGCCCTGGGGGCCTCGAGTCTCTGACCTGATCACTCTTCCCAGCCATTTGTTGAACTTTACGGCTCTCCTTTGAGAAGTTGCTCCAGGATCTCTGTGCTCAGAATCCCAGAGAATGAGGAGGGAAGAGAGTGGCAGGACATTAAAAGTTCAGGAGATGTGCTGTTTGGCCTAAGAAGCACTTCTCAGACATGGCAGAGACCCTGTGCTGAGGGCCGCCACACTTACTCAAGCCACCGGCTCACAGCCTGGAGGCAGCAGGAGGGGATTCGTATTAGCCAGCAGCCCTGTGGTAGGGACCCCCACCCCCAGTCATCTGAAGGTAGAAAAGGCTCCAGGCGTTCTGGCAGGAGGAAGAACAGCTTGAGCCAGACCCAGATAGATCTTTTCAATGCCTGCAGCTGGAAAAACAACAACTCTCAGGGCATGAATCATATCCACTGCCCGCAATGGACAGGACACCCGGCCCAATCACCCTTGAAATCTTATTCATGTTGCCAGCGCCCTCGAGGCTGGAGGTTCCCCAGATGCCCATGCCAGCTGGGCTGACTCCTCCTCCTCTCAGCCTCTATCCTTCATCTCTCTCTCTGTACATGACCCCAGCCCCAGGCTCCAGCCCCCAGTCAGCAAGTTCTCCAG TCONS_00062409 r 5' 128 TCONS_00062409 r 5' 128 EMBV3_16953 TTTGGCAGCACAACCACAGATAATCACAACCCTATGGCTGTGGTGGCAACTGCAGAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25470 TTGCAAGATTTCTGGAAGAAGTCCCGGAACACCCTGGTACCCCAGCGGCTGCTCTTTGAG Gene GeneID:100336856|LOC100336856:XM_002692343:153_cdna Constitutive 0 NULL GeneID:100336856 13 GENE LOC100336856 NULL sorting nexin 21-like EMBV3_38143 CCCAGCATCAGCACATCTGAACATCTCTCCAGGTGAAGCTAACTCATTGCCAGGTTGACA Gene BVT0102_237021 - 1 EMBV3_36970 GK000016.2:2339357-2557487 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21774 GACTGCTTAGTTAGTCACAGCTCTTATTTCCTGCCACTGTTCTACTTTCCCTGCTGTCTG Gene GeneID:530642|DCK:NM_001034573:80_cdna UTR3_Alt 2 NULL GeneID:530642 6 GENE DCK MGC127248 deoxycytidine kinase EMBV3_38836 ATGCTTTCCTGGGTTTCATTTTGGATCGACCGAAGAGCTGTCCCCGCAAGAGTTTCCTTG Gene GeneID:520166|GABRR3:XM_002684670:20_cdna Constitutive 0 NULL GeneID:520166 1 GENE GABRR3 NULL gamma-aminobutyric acid (GABA) receptor, rho 3 EMBV3_25721 ATGCTGCCTCTGTTACAGCCCTCTCCTTGGTCTATATGGGGAGATTTGGGGATCCTGACT Gene GeneID:513676|SIX5:XM_002695095:542_cdna Constitutive 0 NULL GeneID:513676 18 GENE SIX5 NULL SIX homeobox 5 EMBV3_35370 AAGAGTTCCAAAAAGGTGGTCCGAGAGAGCTCACAGTTGGACACGCTGCCGTCTAGTGAC Gene GeneID:526925|OFD1:XM_002700405:90_cdna Constitutive 0 NULL GeneID:526925 X GENE OFD1 NULL oral-facial-digital syndrome 1 EMBV3_30162 GAAGGTGCTGGTGGTGGACCAGCTGAGCATGAGGTGCTCCTGGACGAGGACGACGACCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37613 AACAGTGGGAGCCCAAAGTACATGAGATGTCTCCAGAGGCTCATCTAACTCTTTCTTGAC Gene GeneID:525337|PCM1:XM_002698663:132_cdna Constitutive 0 NULL GeneID:525337 27 GENE PCM1 NULL pericentriolar material 1 EMBV3_43095 GGAAGTTAGTTCTCCTGGGATAGTAAGTGCTAAAAGTTCTCATTGCCAGCAGGCGACCAC Gene BVT0102_111157 + 1 EMBV3_30420 GK000004.2:53854750-54085564 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27350 GCCACGTAGATATCCAGTGTCCCAGCACTGTTTGTTGAAAAAATTCTTCTATACCCATTG Gene BVV0101_013153 + 1 EMBV3_20029 GK000014.2:42330315-42647472 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06771 TCCTAGAGGGGATGACTTCACCACCATTAGTCCTCTTCCTCCTCCCTGCCATGGCGTATC Variant GeneID:281813|FUNDC2:NM_174338:58_cdna 620^673 2 EMBV3_15620 GeneID:281813 X GENE FUNDC2 HCBP6 MGC134489 FUN14 domain containing 2 EMBV3_42891 CACCGTAGTTTCTGCCAGAGAAGTTGTGGGTGAGTGAAGAACAGCATAACAGTTCCAAGC Gene BVT0102_350728 + 0 NULL GK000005.2:5034910-5332833 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20046 AGCCACAGGGAGAGGAGGCTACAGCAGACCATCAAATACTGGTACCTAAATCAGTCAGCA Gene GeneID:507550|MGC157266:NM_001098903:14_cdna Constitutive 0 NULL GeneID:507550 8 GENE MGC157266 NULL hypothetical LOC507550 EMBV3_10739 GCGGCGGCGAAGTAGCAGCACGGAGAGCTGATTCATCTGAAAACTACATCAAGACAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16204 TTTTGGTTTCCTCGAGAGCTGTATTTCTGTCCATCACCTGTGTACTGGCCCCTGTGTTCC Gene GeneID:616164|CHMP4B:NM_001128506:1306_cdna UTR3_Alt 2 NULL GeneID:616164 13 GENE CHMP4B NULL chromatin modifying protein 4B EMBV3_15459 CCCTGACAGCTTAAACAGTGGGGAGTCAGGAACAAGCGTTGGGAACCTTTGCAACTATCA Gene GeneID:100337363|LOC100337363:XM_002690012:27_cdna Constitutive 0 NULL GeneID:100337363 9 GENE LOC100337363 NULL regulating synaptic membrane exocytosis protein 1-like EMBV3_05519 AGTGGCAAGTAAATAACTCAGGGATGGCTCTCAACTCAGGGAGAAACCCACAGGGCTTTG Gene BVV0101_019926 + 1 EMBV3_01938 GK000012.2:24818620-24828340 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07466 CTCTCTTCGCTCCGTCTCCACCCTGCCTCCCCTGAGCAAGTGAGGATGCAGCAAGGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33409 TGTCCTGGATCGTGAGTGCCGTCTTTCCCCTGTTACACAGCTTAATGGTGTTGCGACTGT Gene GeneID:616964|LOC616964:XM_002707853:423_cdna Constitutive 0 NULL GeneID:616964 7 GENE LOC616964 NULL similar to CfOLF4 EMBV3_40031 TGTTTGCTCAGCGACTGAAGACGCTTCGGGAAAAAGACGGCTTTGGGGCCGTGCTCTTCT Gene GeneID:516513|MYO1G:XM_002686881:73_cdna Constitutive 0 NULL GeneID:516513 4 GENE MYO1G NULL myosin IG EMBV3_22903 CAAACCGGGTGGTGCGAACCCTCCAGAACACCTGAGCCTCTTGAGCGATAGGAAGGGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19774 TCGCCGTGAAGAAGATGCGGAAAAGGCTGTGATTGACTTGAACAACCGCTGGTTTAACGG Gene GeneID:512680|U2AF1:NM_001080268:26_cdna Constitutive 0 NULL GeneID:512680 1 GENE U2AF1 MGC151885 U2 small nuclear RNA auxiliary factor 1 EMBV3_21189 GGACTGTTGCTGGAACCCCCATTGTAAGCAGGCCGTGTACTTCTTCAACACCACACTCGA Gene GeneID:514202|PRMT7:NM_001101990:234_cdna Constitutive 0 NULL GeneID:514202 18 GENE PRMT7 MGC165931 protein arginine methyltransferase 7 EMBV3_20782 TACCTGATGATCAAGGCTTTTCTTCCTAAGGCGTTGTGAACAGGTGCGTGTACAGCACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05197 GTGTTTCACGAAGCTTAGCCCTTTACCTTGCCAGCTGCCCCACAGTGCTTGATACTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08911 TACTAAGTTGGTCTGTATGTTACAGCTGGCTGTGTCCTCTTGGCTCCCCACTGTCATAGC Gene BVV0102_399729 + 1 EMBV3_13153 GK000001.2:65620537-65680765 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000845 1 XLOC_000212 NonCoding TCONS_00000845 XLOC_000212 NonCoding NonCoding - 1:65648834-65650335 - TSS411 1222 2 TCONS_00000845_1 69 0.387888707037643 3 0.187333333333333 0.000879582855084452 0.00183371580459218 0.000973108731495411 0.000332981450168142 0.0010464230128028 0.000187341787572408 0.000176573726114188 0.000488860192739734 0.000187244967980515 0 0.000108652127808122 0 0.000117401273965917 5.77413313565379e-05 7.62827751162675e-05 0 0 0 0.000534005975155059 0.00180080111605904 1.98738231182284e-05 0 0 4.11570307165027e-05 0.00174062315155483 0.000882125333928677 0.000887023084873109 7.86021177328743e-06 1.58907167788748e-05 0 XM_005196078.1 LOC101906506 PREDICTED: Bos taurus uncharacterized LOC101906506 (LOC101906506), 0.0 1880 100.00 0.851882160392799 0 noncoding 0 0 0 0 0.232385172373009 0.263794466177879 0.0127800188319447 0.790808160208035 GCTCTGCTGTCAGCGCGGGACGTCGGGTGCCTCAGGGAACACCCGGGCCGGGCTCTGGCGGGGCCGCGCCTCCCGCCCCTCTCCTGGCACCGCCCCGCGCGCTGCGCCGGACCCCGCGCTCGGCCGCTCCCGGCTGTGCGGCCCCGCGCCCCGCGCCTCCTTCGCCTGAACAGGGCTGCCCCGGGGGGTCTCGGCGGCGGAGAGGCAAGAAAGACGCCCATGCTCCAGTTCCCAAGAGCAGGAATTATGTCTGAGATTTTACCCTGGACTTTCCCCGGATCTCTCATTCTCTACAGCCAGACCCTTTCCTGTGGAACATACAGAAAGTGTATCCCCAAGCCCTCAGCTGCCAGGCACAAAAGGTTTAACATCTTCTACCAAGGCCTGCCCTATTTACCTCAAAAAGAACTAAGAATGCTGCTTTCCTGAAAAAACAAACACACAAACCTCCGCGGCCGCCCCCGACCCCCTCCGTAAGCCCCCTCTGCAAGTGGAATACAGTCTGAACTACTTTCACAGTTGGAAACCAGCTTACCATTCTAACCTTCTATCTGCTCAACACCTGTGTTCCAGTTATACTGTGTTGGGCCAATTGCCATTCTTTGAATATATCCTGGATGTTTAATGCCCCTGTGTGATTTGCTCACTCTGTTCATTTATTCTGGATTTCTCTTCATCCCCATCTTTACCTGTTGAATTGTTCCCAAACCTTCAAGAGCCTACTGAGATGCCTTCTTCTTTAACAATGTTCTTCCAGAAATTCCCAGTCAAATCTGAGAGATCAATTAACTTCTCTTTCCCAACATTCTGTGCTTCTATTACAACACTTACTAAGTTGGTCTGTATGTTACAGCTGGCTGTGTCCTCTTGGCTCCCCACTGTCATAGCCTGCAAGGCATAATATGTTTCTGACTCAACTTAAATCCCATGGCAATTGGCAACATGCGTTTTAAAATGAATAACCATCCTTTGGATGTATATAAACTTTGCTTATTGTAAAAATTCAAATAAATAAAAGTATAAGGAAGGAAATAAACCAACACACTGAAATAACCACTGTTAATGTTTTGATGATCATATTTTCATGTATATATTTATGCATATGTCCATCCATCATTTATCCACAAATGGAATTATCTCATGTATGTTATGTTTAGGATACACCCTTTTTTATTATTCTCTTTTCTTACCTGACTCTTCCCTCACTGTTCCCCCTCTCAAC TCONS_00003570 r 5' 108 TCONS_00003570 r 5' 108 EMBV3_34991 TGTCAACCAGAACGGCCTCAACTTCCTCAGCACTGAGACCCACGAGCTGATGGTGAAGTT Gene GeneID:782104|MYO15A:XM_002707762:197_cdna Constitutive 0 NULL GeneID:782104 19 GENE MYO15A NULL myosin XVA EMBV3_08343 ACCTGGGTTTTATGATCTGTACACTTTGGGTAAATTCTGTATAGAGCTGGAGCTCCCTGC Gene BVV0102_184850 + 0 NULL GK000003.2:47274054-47754433 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07723 TTCTGTGGCTCATAAAAGCTAAGGGGGAAGTGAGGAAACAGGAAGAAGTATGGCAGGGGC Gene BVT0102_122457 + 0 NULL GK000017.2:65194881-65206693 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075946 TCONS_00075950 TCONS_00075949 TCONS_00075951 TCONS_00075948 1 XLOC_046690 Coding TCONS_00075949 XLOC_046690 Coding Coding MLEC 17:65186633-65201768 j TSS57128 7747 2 TCONS_00075949_1 209 0.0411772298954434 5 0.488436632747456 0.00430751626296191 0.000969730448487817 0.00468360680040707 0.00464941301929524 0.00276313062174202 0.00176406178463524 0.00389020929177074 9.53597706138627e-09 7.76044768567319e-08 5.47268475456255e-08 2.41103340310338e-07 0.000103831379187299 0.000927807931740669 2.83893703443306e-05 3.81625480853192e-08 0.0123303558908835 2.5203095813117e-06 0.0205308518078832 0.00611250460054432 0.00576065759481685 0.00217034181473808 0.000421045657708738 0.00630160382913449 0.0100251877042806 0.00725895352036281 0.0050425379831953 0.000155399220140709 0.000150084819006012 0.000735986945971704 4.53774957182119e-08 NM_001098983.1 MLEC Bos taurus malectin (MLEC), mRNA. 0.0 1436 99.63 0.103523944752808 NM_014730.2 MLEC Homo sapiens malectin (MLEC), mRNA. 0.0 4673 77.12 0.780689299083516 TCONS_00075949_1 sp|Q14165|MLEC_HUMAN MLEC_HUMAN Malectin; 1e-153 432 99.52 0.995215311004785 1 coding 0 0 0 0 -1.3140745755344 0.0156545498018922 -0.0502781804270362 0.494381039137006 GAAGCCCTTGAGGAAATTAGAGACCGTTTGTGGACTTCGCCTCTAGAGATAGCTGTGCCTCTGACTATGGCATGAAGCTACCAATCCTGCGTTCCAACCCGGAGGACCAGATCCTATATCAGACAGAGCGGTACAACGAGGAGACCTTTGGCTACGAAGTGCCCATCAAGGAGGAGGGGGACTACGTGCTGGTGCTGAAGTTCGCTGAGGTCTACTTCGCGCAGTCCCAGCAGAAGGTGTTTGACGTGCGGTTGAACGGCCACGTGGTGGTGAAGGACCTGGATATCTTTGATCGTGTAGGGCACAGTACTGCCCATGATGAGATCATCCCGATGAGCATCCGGAAGGGGAAGCTGAGCGTCCAGGGCGAGGTGTCCACCTTCACAGGCAAACTCTACATCGAATTTGTCAAGGGATACTATGACAACCCCAAAGTCTGTGCACTCTACATCATGGCTGGGACAGTGGATGATGTGCCAAAGCTGCAGCCTCATCCAGGACTGGAAAAGAAAGAAGAAGAGGAGGAGGAAGAAGAATACGATGAAGGGTCTAATCTCAAGAGACAGACCAATAAGAACCGAGTGCAGTCGGGCCCCCGCACGCCCAACCCCTACGCCTCGGACAACAGCAGCCTCATGTTTCCCATCCTGGTGGCCTTCGGAGTCTTCATTCCAACCCTCTTCTGCCTCTGCCGGTTGTGAGAACCGATCACCATCCTGAACAGGTGGAGGGGTGTGGGAAAGAAACCGAACGTGTTGGTTTGGGTTTCTGTATTTTTTATAGTGATTAACAAAAACGTGAGAAAACACACACACACACACACACACACACACACAATTAAAGGAGATGAAAAGAGGCAGAGTGACTAGAGAGCAGCCCTCATCCACCACCTGGTCCCAGACCTGCTCTAGTCCTCATCCTCTCCCTGGGGCAGCCCCCAGCTGTCTCTTTCCTCTCTCGGGTACGTAGGGTAAACTCGATCCCACCTGGCCAAGGGTCTTCGTCCAGTGGAAGGAACTCTGAACTCAGAGCTGACCTGGTTCCTTTTCTTAGGTTAGAAATTAACAGCAGGCAAATACGATCTTCTTACTCCAGAAGACCAGCGCTGGGAGTTGGGTATGTTCTGAAGTGACGTCCAGAGAAGTTTTCAGATGTCCTGGGATTCCAAGTGGGTGTGTGGTCTGTGTGTGTGTGTGAAGGTGTATAATTTGTATGATAAGACAAAAATGGAAGGGGGATTCAAAAGAGGAAAAGTTAATACTTCCTTACATGGAAGCCTGTCTGGTTTTAGCCCAGTGACGGTTCCACCTTAAGTGTTTGAGCTTTGTCATCGCTTTTCTCCTTGACACGCGCCAGTTAGAGGACTGTCTGGTATCCAAGGCGATTCGTTTCTATCAGGTCCTCGAGTTGCCTATGACTTCTTACCACAGCAGATCATTTTGATTTCAGTGCCTGTTGGGGATTTGATTTCCTCTCTCTCTCTTATTTTTCTGAACCTGGCTCATTTGGAAATCTCTTCTCGCTCTCTCTCAACCATCCTGCTAAGTTATTGCCAAGAAGGGAAGGAGACATTGGGGATCTGGAGTTCCCTCTGCTTGAATGTCTTCTCCTCCACCACCTCACCTTACTGGTACCTCCCTCCCTGGATCTCTGAGCCAGCAGCCAGGAGGACCTGACCGAGCAGCTCTTTTACTGGCCCCTTTGTAGGGGCTTGCTGCCAGGGGACACAGAGGCTTTCCAGCCTGCAGACACAGAACACTTGACCTTAAAAGTCTCTTCTGGTCTTTGGATTGGAAAAGGCTTACGTTAACATAACTTAAGAGCAACCTCAGAGACCTGAGCCCTACTAAGTGACTGACCACTGTTGAGAGTATCTAGTATCGGACGTTCATTGATTCCCTCCTCGTCCTACGTCATGGTTCAGCCAGTTTTGGCTTAAGGCTAGAGCTGCCCCAAGGAGCTAGAATAATTGTATCTGGCCCAGTGACGCCTTTCACTGACCTTAAGAGTGCGCCCTTATGACCTTTCATTTCCCCTGTCCAGGTCACTGCCAAGTTCTTGGTGTGATGGGGCAGGAAGGTTAACAGGCAGCCCTAGGCCTGGCAGCCCCGGATATGTCTGTCTTGAATTCCCTGCGAAAATTTTCTGAGGGAAGTGAGGCTCCCCTGTTGCCCACCTTTCTGATCCCAGTCAGCCTTTTCCCCATTAGCGGAGCACTGAGCTGGGACCCAGGCAAGCTACAAGGAGTTTTGTGGATGGAGAGCCACAGGATGAGCCGCTGCTGGGGCTGGAACAGCACAGACTCTCAGGCCAGGCCCATCTTTAGAACCTGTTGAATTTTGAGGGTTTTTTTTGTTTCTGGTTTCCAAGAGCTCTGCATATTTGAACTGGTAGTTTTGGGACAAAGGAAGTAGCCCCTGGGCTCCCATCCTGGGTTTTGGGTTCTGACCGAAGTTACTCCAGGTCCGCCTTTTAGTCCTTCGAGAGAGTCAAAGCCCTTCATTTCAGTTGTGACTTAGACGTCCGTCCTCGGGCAAGAGTCAGGCTGCCGGGTGGCTGCGGCCTGAAGCTATGACTAGAGGCGCACTTGGAGTGCATCACAAAGCCTCCTGCATTTCGCAGGGACGTCCTGAAGCCTCTGTCCTGGGGACCGCCTGCCTGGGGCAGTGGGCGTCCCGACGGTCACTCAGGCTTCTGACGGTGGCTTGGATTCCCGTCCCATCGCTGCTCTCCTGAGGCCACTGCCCACGCCACGGGGTAAACAGGATGCGGGAGGGCTTGCGGCCGCCATCTTGCCTTGTCCATTCGTTTGCTGGGTCTCTCTGAGGAAGGAGGGCTCCCCGCCTCCTCACCTCAACCCTTCCCTCCAGTGACTCAGAGTCTCAGAAGGAAACCCTGACTCCTGGGGCCATTTCCTCACGGTACTGTAAGCCAAGCAGCCTCGCTTCTGCCTCTGTTTCCCAGCCCACCCTTTCCCTGAGCTCAGGGACAGGGATGGGCGCTTTCCTTTTTGGTCGTGTCTGAAAGGAAGGAACAGCTTTCTGTGGCTCATAAAAGCTAAAGGGGAAGTGAGGAAACAGGAAGAAGTATGGCAGGGGCGGGGGTCAAGTACCCTGTAGCCAAGCCCACCCAGCTCTCAAAGCCGCCCAGGGCTGGTCACGGTTGGCTTGGGATGCTGAACTTGAAAGCTTTTTGGTTTGTTTGTTTTTTTTTTGCTCCTTCAAGATGTTATAGGTACATGAAGTTTAGGTTAAAGGGGTGGGAACGGGGTACTGTTTATTTTTATTTTTTGTATTGTGCGTGTCAAGAATTACTCTGTTGTTTATCCTTTGCTCTTTGCACTGTTTGTCCCTGTGTCTGTGTCTTGAGCTGGTGCTAGGGCTGAGAGTCTGCGCGGTAGGGGAGTTGCTGGCTGGGGTTGGGGAGGTGAGAAGTCAGGCCTGTTAGGGGTGGGAAAGGAAAGACCTCGACTCTTCTCTACGGGATCCACACTCTGTCCGAGCTTCTGAGATCCTCCTCAGCCCAGCTGGCCAAAGCCAAGAGCAAACGCTAACTGAGATGAAACTCCTGGTGCCAGAAGTGTGGCTCAGGTCCAGTTTCCAGTTGGACCAGGCACAAATGTCCGTGGGAGGTGGGCTGAGTCTGCATTGTCGCCCTGATTGGGGTCAGAGACCAGCTGGCCTCCAATCAGACTTTTAGGGGGCTTCACTCAACCCTGATGGGAACATCATGCCAGGAAACAATCTGTGGGACCCAGGTACCCTAAACCAAATATGTTGTTCTGGGCGGAAAAAACAAAACAGAAAAAAACCTGTATGATCGAGAAGAAGCTGCTCAATGTTTACCTTGCGTTTTGGCGACTTGAAAGATGGTCCTCTTTGTTTCAGTGGTGTTAGACTCGCAGGAGGACCACAGGGCCTGTGGGCCCACCTGTCGCTTGGAGAGTGTGATCTTGTTTTCCCGTTCCCACCGTTTGCCTAAGAGATACTGGCCCAAAATTGGAGGATCATATTAGAAGTCACTTAGGCTTTGAAGAGATGGGGTAAAGTTTGAGTTACCTTACCCGCCCCCTTTCTGTGCCTGGGGACTGTTTAATCCAGTTTTAGAATCGCGTTGTGACTTCTTTTCTTTTTGGAGAAGCTTCTGTTTTAAGGAATTTCTCGCCCTTCGCATCCTGCTTCTGCGCTCTCCTGGGAAAGCCTGGCCGTGGCTTCTAGGATCTGAGTTGAACTTCGGAAAGCAGCAGCAGTATTTTCCCTTTCCTAGCTCTTACGCTCCTTTTCCTAGAAACGGGCTCACCTTGGGAAGCCCAGGGGGAGAATCAGTAGGTTCTCCACTCTCCCTGGGGGTTGGGGAAAGACCCAGCCGGTCAGCACAGTGCCTTTTCCTCTCCTGCTCTGAGCCAGGATGGGTGTTCCCACAAGATTCAGGTCTGGGCAGGGGGTCTCACTGTTCCTGCCGTGGGGCTGCCTCCCCGTCCCTTCTCTCCCTTCCCCTTTGCTGGCTGGCTCTGACCTAGTCCAAGTGTCTTCTTGCCTCGGGGAGCCTTAATGGCATCAAGTGGCAACATATAATGCTATCCTCCACGCCTCTCCAAAAAGACTTAGAAGAGCAGGTGAGCTTTCCAGAATGAGAGACTAATAAGAGATACTCCTGTGTCACAAAAACAAGGTGGGGAGGGAGGGTAAGCTTAGGGCCTCCTGCTGTGACCCTGGGGAAGGAGCCTAAGGGATGGTGCAGAAGTAGAACCAGAGACACCTGGGATCCGTTCAGAAACCAGAAAAGGAATCTGCTCCTCTTCTGTGGGAAGAGACGATTAGGGATGAAAGAGCTCTAAGAAAATTGCAAAGAAGCCTTATCGTTCAAGCTTCAGAGAGATCGGAGTCGTTTCTCCCTTTCAGCCCGAGCTAGGGCTCCTTCTGTATTTAGACCTCTCCTGGGGCAAGAGGGCTAGATTTCCCCGTTTTGTTACAAGACTAGGTTGGCACCAATGGGTCCACTGCCCGGCGAGGGTGGTTTCTTCTCTGTTACGTGGGTGGCTCACTGCCGATCTGGTGTGTCCTTGCCTAGCAGCCTTTGGCTAGCTGGCTTTCAGCTGCCAGACCATTTGGATGAGGGCTGGCAATTTGGGGCCTGGCTGGGTTGGCAGGGAAAGAGCAAGATGGATCTCTTGGGACGGGTTCCCTGCTCCTGCCCCGCACCCCCCCCCCCCCCCCCCCGCCCCAGGAGTATAAAAACAAGGAGCCAGGATGGTGCTGGCAGCCAGGGAAACAGTAGTGCCTGTTGGAGTTGGCAGAGAGGCCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGCACGCAGCACCAGGAAAAGCAGGACTCCATTCTCACCTCTATTTTGAGCTTCGGGCCTTTATTTCAGTACAAGGAAAATCAACAACAATCTGAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCAGGAAAGGAGGGCTGAGTTGTCAGGTGGGAGAGGGGAGTTTGCAGGGCCAGGTGGGAGGACAGACCGGGGAATGAGACACCCTTGACTCCTCTCTTCCCTGCTGCGTCGTGATCCGGGGAATGAAAAGAAATTGGACCCTGGATCAGTCCCCTCCGAGGATTTTCCTTCCCCCAAGCTCTCCCATGCTTGGACCAGCTGTCCCTTCAGAGCTCAGGGCAGCCTCTTCAACTGTCATCGGCCTAAGCTGGGCTTGTTAGGACACCAGCCTGCCCCTCTTGGTCGGTCGATTCTGTACCAAGTGCTGGAGCCACAGTGTCCAGTTCATGGTAGCCCTTGTAGCTCCTATTCTAGAAGCCCATCCTCTCCCTGCGGAGGCCAAACCTGCTCTGTCTGTAGCCACAACATGCATTTATAGCAACACAGCGGGGTGTGACTGAGGAGCTTTGAACCTGGCTGGCCCGGGAAAGCTGCCGGGGCGCACAGAGCTGTCTTTCCTTCCGGGCTCTCTCCATCTGCCCTACCCCTCCCATGCCCCCACCCAACTCCCACCAAAAAGTGGAAAAAAAAAAAAAATCAGAATGTTTTTCACTGTCCATTGCTTTGTGTTTTAATAAACAATTTGCAGTGACACTCAGTGTTGGGATTGAGTTTGAACTTGATCGCAAAGAAGTGAGGTGGAGACCCAGGGGTTCTCTTGGCTGCAAAGGGTTCTCCCATGATGTGTCAGGGAGCTTTCTTTTCACCAGGATGTTTGGCTAAGGGAACGAAGTTTTGTGAAATGCCGCTGGGTCTTTTCAACTGGCAGCAGCTCTCTCAAGGAAAAATAAACAATTATTTTGTTTTGTTTCCACTTTCACTGGAACACCAGGCCGGGACTCTCATTTCCAAGACACACTGAGCCCGTTGCTGCTTCCCCTCCGGTTTTCCCCTCAGCTTCCACAATAACCTGTGGACAGACTCGGCCATGAGATGGTTTTCTCTGCTTTCTCCTCTTATAGTGTGCTGTCAGTGTTGATAAGCTCAGAAACACGAAGCTCAGAAAACTTCAGAAATTTACCCCAGACTAGCCAGTAAATGGTCAAGCCAGGATTCAAACCCAGTCTGTCTGGCTGGAAAGCCCATGATCTTGCTAAGGCTATAGCAATAATCATTACAGATACCTTTGACTGAGCCTTTGAGATGGGCCTGGCAGGAAGGCCCAGCACTTCCACAGACGTTAATCTGTTTAATCTTTAACAAACGAGTTGGTATTCACCTTTAAGAGGTGAAGTGACTTGCTGAAGGTCACAAAGCCAGCAAAAGGCAGGGCTGAGGTTTTAAATCAGGACTCTCTTGCTCTTGACCATGACTCTCCCACACCCCCCCCCCCCCCGCCCCCACCCCTGACGCCATGTTCTGTGATTCTCCAAGCAGGAACCAAGGCTGCTGGTATGGGGAGAGGGAGGGAGAGTGTGGCCTGCCTCCCCTCAGTTATCCCTTGAAGGGCAGAATTCAGCGCTCAGCTCCAAGAATGAAACCACTGTTGATGGAGTCTGTTCTCAGGGCTCAAATAAGCCAGGAGGCCCACAGAGCCTCATTCTTAGCTTGAGCCCACCCATAACTAGAGTTCTTGACTAATTTAGACTTGGCTGTTACTATTTCAAGTAGCTTCGCGTGAGCTGCCAAATGGGGAAGAGACCTGAAGAAGCCCTACTCTAGGGACTCACAGGGAGGGAAATTGTCTGACAGAAGGTCTTGGGCCAAGTGCCGGGGGTTGGGTTAAAGCACTCTTGGGTCCAGATCTTAATCTCGCTGAGGAAATCAGGCTCCCGGTTGGCTGGAGCCGATGTGTCGGACCTTTCTCCATACTTAGTACCCCACGCCCCTCCACCACCCCCATAGAGGAAGAAAGAAAAGAGTTTTTCCAACATTTACTGGAATGCCTGTTGCCATAGCAATGGCGAGAGGTCAAGGCGGAACAGAGGCGAAGCACGGAGCAGACGGCCTCTGCTCTCTAGCAACCGGAAATGGTAGGCACCTCACCACAGTTATTTGGCCCAAGAGTCTTAGTTTTGTTTGTTGTTAACCACTTAATTAGTGAAAAACAAACCCACTTGTTTTTTGGCTTGGGCCTTAAGACTCCTTCTCCTGGGTTTTACTTTTTAGCCATGAGGCATGTGGGATCTTAGTTCCCTGACCAGGGTTTGAACCTGAGCCCCCTGCCTTGGAAGTGCTGAGTCTTAACCACTGGATCACCAGGGAAGCCCCTCTTGTGGGTTTTCTCATGGCTTCTACT EMBV3_10547 CTAGGCCCTGAGGCAGGGATGGAGAAGAAAGAGAAGGACAGACAAATCCCTTCTGTGTTT Gene BVT0102_351885 + 0 NULL GK000010.2:86551552-86595703 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21903 ACAAGCTTCAGGGTTCTACTGCCTTTGCTGGAGCTGTGATTCCTCATCTTCCTCAAGGTT Gene BVV0102_101241 + 1 EMBV3_06940 GK000014.2:62569284-63227881 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00057124 1 XLOC_034925 NonCoding TCONS_00057124 XLOC_034925 NonCoding NonCoding - 14:62655075-62656330 - TSS42801 1255 2 TCONS_00057124_1 68 0.164940239043825 1 0 0 0 0 0 0 0 0 3.29904044208496e-05 0 0 0 0 0 7.49640291699924e-06 0 6.31350210928117e-05 0.000608528970177801 0 0 0 0 0 0 0 0 0 0 3.06140789603511e-05 0 0 0 noncoding ATTATAATAATATCTTTATTCTCTAAGATTGTTCAGGAGATTTCCTGTGTTAATAGAAGCATTATTTGCAATGCCACAACATCCTTTGAAAGCTTTGACTGCTGACATTTTACTCAATTTACATAATTCTGTCTCTTAGTTTGAATAATAATAATGATAACAACAACCACTTATGTGCTATGCACTGTTTTATACATATCAAGTAATTTAAAGCTCTTAAAGGATCTATGATGTAAGTACTATTATTATCCCGATTAAAGAGGAGAAGACTGCAAAGTCATAAACCTTGAGGAAGATGAGGAATCACAGCTCCAGCAAAGGCAGTAGAACCCTAGAGCTTGCGCTGCCTCCCTTGAAGAGATGGAGCTCACCTTCTTAAAATACACGTCGCTCAGTCAACTGGCATTTAAAAGTGTTTAGACTTTCTACTTGACCAGAAGTAGAGACACTTTGTTTTCAACTCAATCACTCAGAGGTGATTGGTCTCCTGGTCTTGATTTATATATGTGCATAACCGGTCCTTTATCCAGGGGAGTACAAACTAATTTTAAGGAATGTTTGAATTTCAGTCTTTCCTTTGCTGCCAATTCTCCCCTCTGGGTGTCTGCTGCTGACCGGCTTCCACTGCCTCTGCACTGCGCCTGCAGCTACTCACCACTATCTTTAATTCAATCTCTGCTCCTGTCACTTCTTGGTTTTCATATTCAGTGACAAAGCATTTATAGACATGACCAGTCAGTCAGTGTTCCTTGTTGTCCATGGGTCAAGCTGACAAATCACAGAATGCTGACTGTAATCTTTGTAATCTTTTCAATTTCTTTTCCTGCAGCTTGGACAATCTGCTTCTCTTTTGGCAAGGCTTTTGGGGATAATTCCAGAAACTTGAAGATCCTTCAGGTGAGCCAAACAACAAGGCAAGCAGTAAATTTTGTTCTTGAATGATACTGTTCAATGGAAAAAGCATATGAAGTACACAATTTCCAGATGAATTAGATGAGCAGTTCTTATATTTTAGTTTTTTGCCAGAACCACCTGAAAGAGCTTTTCAGGAATACAATCTGCAGCCTAGTCCTGGAGATTTTAATATATTATTTCTAGCAAGAGAACCAGAACTCGCATTTTAAAGTTTCTCTGGTGATCTAATGCAGTGACCGTACAAACACCACAAAGAAACTCTGGTGTAGGCTAACAAAAAGTAATCTTATAAAATATCTTATTTAGGTAGTTTTGCCCTTTAGATTAGATAGAATTTTAT TCONS_00053632 TCONS_00053633 . 5' 2796 TCONS_00053632 TCONS_00053633 . 5' 2796 EMBV3_08194 CGTCCGGTCTCTCAAGGTGGAATGTGGCGCAATCATAAGGAGTCTAAGATTACAATTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13752 TTCCACAAATGACTGCGTCTGTGAAGCTGTGTGAGATGACTGCAAGCAGCCCCAGCATGA Gene BVT0102_077903 + 0 NULL GK000014.2:65833757-65898280 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053710 1 XLOC_031809 NonCoding TCONS_00053710 XLOC_031809 NonCoding NonCoding - 14:65877231-65885806 - TSS39567 1014 3 TCONS_00053710_1 51 0.529585798816568 2 0.88196874271052 0.000395616839829976 5.9458238948078e-05 0.000173352220909223 0.000445135639197076 9.33315693062401e-05 2.82213308708432e-05 0.00028938383667676 0.000513309001753754 0.000230303940473742 0 0 0 5.65931737115854e-06 9.27809861039907e-06 3.9471786300861e-05 0 0 0 0.000615256219141003 0.000323089873709378 0.00034279185985639 0 0 0 0.000286978480906816 8.25643096839762e-06 0.000157507743204813 0 0 0 XM_005210123.1 GNE PREDICTED: Bos taurus glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase (GNE), 2e-21 107 72.41 0.195266272189349 XR_249808.1 LOC101929215 PREDICTED: Homo sapiens uncharacterized LOC101929215 (LOC101929215), transcript variant X1, misc_RNA. 1e-19 102 75.62 0.14792899408284 0 noncoding 0 0 0 0 -0.516844123777782 0.101025664867048 0.00826020894450198 0.857363663987513 GGGGATACATCCTGGGCATCAGGCTCTTAAAACTTGCCAGGTGTGAGGGATATGGGAAGGTAATAAAAGCCATTATAGTCAGAGCCCTTCCTAGCTCTTTCGGATTCTGAAGTTTGGAGTTTGGCTCCACCTTGCTCTGTGTGAGACAGCGTCTAATCTCAGAGAGATGGCTCCCTGGGAGGCTGGCTGCATTTAGAACTTCATCCAAGCTGCTTTCTGGGATAAAATGAAGTCTGTGAAGCATCACCTGGGATTTTATTCCAAGTTTTACATTCGTTTGCAGAATGAAGATTTGTTTCGCACACTGCTGGGGACCCACTGAGTTCTACCATCCTCTCCATGTTGGCTTCATATGTATCTTCCACAAATGACTGCGTCTGTGAAGCTGTGTGAGATGACTGCAAGCAGCCCCAGCATGAAGCTCACCACCCTGGAATTGTGCTCCTCAACGAGAGGAGTGGGAGGGGGTGTACCCCCTAGAAAGCATCTTGGAAATTTGTGGGGATAGTTGGGGTTGTCACGGTGATGGTGGGGAGCTACTGTTTGAATTTCATGCTAGACATCCTACGGACCATGGGGCACTCCTATACAAAGAAGAGTTCTTATGTTCTATGCCAGTTTCTAATGTCCCACTGGACATTCATGTAGGTAGAGAGCCTATTTGTAATGAACTGAGCCTAGACTTAACCCCGTTTTATATATAAAGCCGTTTGCACAGTCATCTTTAATTGAGTATACATAACATAATGACATAACTTTAGTGTCAGGCATACAGTATAATGTTTCAATACCTATATACATTGTGAAACGGTCACCACAATGTCTAATTAAGTTCTATCACCACACTGAGTTACATATTTTTTTCCTTGTAATGAGAACTTTTAAGATCTATGCTCTTAGCCACTTTCAAGTATACAATATAGTATTATTAACTATAGTCACCATTGTATTATATTCCTATGATTTATTTTATAACTGGAAGATTTTATCTTTTGATCTCTTTCACCCATTTTG TCONS_00052132 r 5' 20359 TCONS_00052132 r 5' 12475 EMBV3_23041 GGCCTTACCTATTCCCTGATGCCCAAAAACCCAGCTTCATCCTCAAAAGGAGCCATAAAG Gene BVT0102_060349 - 1 EMBV3_40805 GK000030.2:137145421-137203201 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40179 AGCAAGTGGAGGGGGCGGCCCAGGAAGCGGCCATGGACCAGGTTGCCAAGACTACCCAGG Variant GeneID:613941|C28H10ORF116:NM_001114513:17_cdna 128^190 1 EMBV3_04339 GeneID:613941 28 GENE C28H10ORF116 MGC137003 chromosome 10 open reading frame 116 ortholog EMBV3_26302 ACCTTGCTTCGTCAGGATAAGCCGGATCCCCTTGGCTTTGGGAATCTCTCGTGTCTTCAA Gene GeneID:511364|VPS52:XM_002697177:215_cdna Constitutive 0 NULL GeneID:511364 23 GENE VPS52 NULL vacuolar protein sorting 52 homolog (S. cerevisiae) EMBV3_19425 AGAGCATGCGGTTATTGGCCAGTGACTTGCAAGAAGCTCTCTAACCGTCTTGCTCAAATC Variant GeneID:508022|CDCA8:NM_001083652:101_cdna 838^884 1 EMBV3_04703 GeneID:508022 3 GENE CDCA8 MGC151855 cell division cycle associated 8 EMBV3_09640 AGTCTTGAGAGAATCCTTCACACTTCTGCCTGACACAGACCCTCTAACACGGAGCATCCA Gene GeneID:528498|JMY:XM_002690458:346_cdna Constitutive 0 NULL GeneID:528498 10 GENE JMY NULL junction mediating and regulatory protein, p53 cofactor EMBV3_05460 CTCTCCAGAGTTTACAGAGTGTTGGGACTGTCACCTGTGCTTTCTGTGGGGTAGCAAGAT Gene GeneID:614183|NUDT4:NM_001081618:46_cdna UTR3_Alt 2 NULL GeneID:614183 5 GENE NUDT4 MGC155166 nudix (nucleoside diphosphate linked moiety X)-type motif 4 EMBV3_33611 GATATTTAACCACAAGCCTGATAGTTATCTAAAGAATCCTCTTTGTTGGAAGAAAAAAGT Gene GeneID:515091|IFIT5:NM_001075698:31_cdna Constitutive 1 NULL GeneID:515091 26 GENE IFIT5 MGC137763 interferon-induced protein with tetratricopeptide repeats 5 EMBV3_05684 AAAGAGAAAACCAGCGGCACCGTCAATATCCGTACCAGAGACAATAAGGTGCACGGAGAG Gene GeneID:510075|TARS:NM_001034370:18_cdna Constitutive 0 NULL GeneID:510075 20 GENE TARS MGC128147 threonyl-tRNA synthetase EMBV3_09971 TTCTCCTGGGTCCCTCTGGGGTTATGGGAGGCCCGGATTCAACCAAATGCAGGAGAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00711 AAGAAGAGGCTGCAAGATAAGCTAGCGGCGACGCAGAAGAAGCTGGATCTGGCCTGAGAT Gene BVT0102_060282 + 0 NULL GK000011.2:1648475-1670783 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023693 1 XLOC_014337 Coding TCONS_00023693 XLOC_014337 Coding Coding LOC100335806 11:1665982-1667064 = TSS17568 483 1 TCONS_00023693_1 56 2 0.555041628122109 0.000169014960264662 0.000332867370873633 0.00057478329332995 0.000825256975349013 6.13314369070594e-05 0 0 0.000269407672113414 0 0.00115853594413458 0.000895767499384565 0.000192480122965019 0.000231681329411026 0.000808346659235123 9.23431834025739e-07 0.0171155669752914 0.00673716507246538 0.0173506552892919 0.000133619761833606 0.000446671873441609 0 0.00218164577083262 0.00545125438433848 0.0124953732680064 7.17233601907586e-05 0.000277150275272553 0.00118881252015547 0.00151137013905205 0.00186947386989051 0.00362228861413785 XR_226997.1 LOC100335806 PREDICTED: Bos taurus uncharacterized LOC100335806 (LOC100335806), 0.0 865 100.00 0.989648033126294 NR_027063.1 LINC00116 Homo sapiens long intergenic non-protein coding RNA 116 (LINC00116), non-coding RNA. 1e-78 297 76.36 0.890269151138716 TCONS_00023693_1 sp|Q8NCU8|YB039_HUMAN YB039_HUMAN Putative uncharacterized protein encoded by LINC00116; 3e-31 108 96.43 0.982142857142857 1 noncoding 0 0 0 0 -0.201612829500848 0.114818397986295 -0.00900516491489789 0.859531383745404 CGCCGTAGCCGCGCTGCACGCCCCGGGTTCGCGATGGCGGACGTGTCCGAGAGGACACTGCAGTTGTCTGTACTGGTGGCATTCGCCTCCGGAGTGCTCGTGGGCTGGCAGGCAAACCGGCTGCGGCGGCGCTACCTGGACTGGAGGAAGAAGAGGCTGCAAGATAAGCTAGCGGCGACGCAGAAGAAGCTGGATCTGGCCTGAGATCCCCGCCCTGTTGGTCCCCGCCGACTCCCGCGCGACCACCTCGAGGGCATCTACCCTGTCCCGTGCGGGGCCTCGGCCATAGCTAGGCCCGTCTCACGCCCTGCGCCCGCAGTGCCAGGCTTGTCTTGGAGTTGCTCATTGAAGATGGATATGGAGAACTGGAGAGAAATAATTCTCCTTGCACTTTATGAATCAATTTTATTTTTAAAATAAAAAATGTAAACGTATTTGAACCTTTTATTAAAAGGGAAAGGAGTATCAGTATCCTTGCATAAA EMBV3_32854 TGAGAAACGCCAATTATCACATTCCTACTGTCTCCACCAGGATGTCGTGAAGCTGGCCTG Gene GeneID:784191|LOC784191:XM_002693377:12_cdna Constitutive 0 NULL GeneID:784191 15 GENE LOC784191 NULL similar to hCG1811275 EMBV3_03567 ATGCCCTCTTTTGGGGCAGCTCGTTGAAACTGAAGCACAGTCTGACCACTCACGATAATG Gene BVT0102_038624 + 0 NULL GK000015.2:29715638-29720789 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058725 TCONS_00058723 TCONS_00058724 TCONS_00058726 TCONS_00058719 TCONS_00058713 TCONS_00058721 TCONS_00058714 TCONS_00058720 1 XLOC_036173 Coding TCONS_00058723 XLOC_036173 Coding Coding MLL 15:29667706-29718779 j TSS44176 8737 1 TCONS_00058723_8 1778 35 0.829613095238095 8.99457077732008e-194 1.84069366137224e-229 6.8028207491104e-06 8.17612282016929e-31 0 1.76913790026716e-24 4.80026681411105e-14 4.17783027816908e-08 2.34833543218499e-60 0.000213767705748448 0.000455136309665141 7.86021570106961e-32 5.82270411343544e-13 1.01686219563726e-314 8.49332973377014e-13 0.000709879197163906 0.000412319725724797 0.000462452125990473 1.59041269135265e-05 9.37827718873793e-104 2.04656715692141e-86 0.000552649602455072 4.78607846432487e-09 8.89888002563311e-06 2.08065799528479e-36 2.00668683229499e-117 0.000157547497809357 9.83380699248601e-10 6.99251549671526e-05 1.88162440451214e-95 XM_585092.5 KMT2A PREDICTED: Bos taurus lysine (K)-specific methyltransferase 2A (KMT2A), mRNA. 0.0 9618 99.96 0.610850406317958 XM_005271553.1 KMT2A PREDICTED: Homo sapiens lysine (K)-specific methyltransferase 2A (KMT2A), transcript variant X1, mRNA. 0.0 6480 87.03 0.610850406317958 TCONS_00058723_8 sp|Q03164|KMT2A_HUMAN MLL1_HUMAN Histone-lysine N-methyltransferase MLL; 0.0 2107 97.56 0.622609673790776 7 coding 0 0 0 0 -0.0272738481239157 0.835129707257756 0.0306491545560408 0.520850213646757 GATGAGCAGTTCTTAGGTTTTGGCTCAGATGAAGAAGTCAGAGTACGAAGTCCCACAAGGTCTCCTTCAGGCTCCATGTTGGCTCAGGCAGACAAGCTTCCAATGACTGACAAGAGGGTTGCCAGCCTCCTAAAAAAGGCCAAAGCCCAGCTCTGCAAGATTGAGAAGAGTAAGAGTCTTAAACAAACTGACCAGCCCAAAGCACAGGGTCAAGAAAGTGACTCCTCGGAGACCTCTGTGCGAGGACCCCGGATTAAACATGTCTGCAGAAGAGCTGCTGTTGCCCTTGGCCGAAAACGAGCTGTGTTTCCTGATGACATGCCCACCCTGAGTGCCTTACCATGGGAAGAACGAGAAAAGATTTTGTCTTCCATGGGAAATGATGACAAGTCATCGATCGCTGGCTCAGAAGATGCTGAACCTCTTGCTCCACCCATCAAACCAATTAAGCCTGTCACCAGAAACAAGGCGCCTCAGGAACCTCCGGTGAAGAAGGGACGGCGATCCAGGCGGTGCGGGCAGTGTCCCGGCTGCCAGGTGCCTGAGGACTGTGGTGTTTGCACTAACTGCTTGGATAAGCCCAAATTTGGTGGCCGCAACATAAAGAAGCAGTGCTGCAAGATGCGAAAATGTCAGAATCTACAATGGATGCCTTCCAAAGCCTACCTTCAGAAGCAAGCAAAAGCTGTGAAAAAGAAAGAGAAGAAATCTAAGACCAGTGAAAAGAAGGAGAGCAAAGAGAGCAGCACTGTGAAGAACTCGGTGGACTCCAGTCAGAAATCTACCCCATCGGCAAGAGAGGATCCTGCCCCTAAGAAAAGCAACAGTGACCCTCCTCCCCGCAAATCCGTGGAGGACAAGAGTGAGGAAGGGAACACCGCCACCCCAGGACCTGAGGCCAAGCACGTGGCCACGCCCGCTTCCAGGAAGTCCAGCAAGCAGGTCTCCCAGCCGGCACCAGCCATCCCCCCACAACCCCCCAGCACAGCACCACCGAGAAAAGAAGTTCCCAAGACCACTCCCAGTGAGCCCAAGAAAAAGCCACCTCCACCTCCAGAGTCAGGTCCAGAGCAAAGCAAGCAGAAAAAAGTGGCTCCTCGCCCAAGTATTCCTGTAAAACAAAAGCCAAAAGAAAAGGAGAAACCACCTCCGGTCAATAAGCAGGAAAATGCAGGCACTTTGAACATCCTCAGCACTCTCTCCAATGGCAATAGCTCCAAGCAGAAAGTTCCAGCAGATGGAGTCCACAGGATCAGAGTGGACTTTAAGGAGGATTGTGAAGCAGAAAATGTGTGGGAGATGGGAGGCTTAGGAATCTTGACCTCTGTCCCTATAACACCCAGGGTAGTTTGCTTTCTCTGTGCCAGTAGTGGCCACGTAGAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTTTTGTCTGGAGGAGAACGAGCGCCCTCTGGAGGACCAGCTGGAAAACTGGTGTTGTCGCCGCTGCAAGTTCTGTCATGTCTGTGGGAGGCAGCATCAGGCTGCAAAGCAGCTGCTGGAGTGTAACAAGTGCCGAAACAGCTATCACCCTGAGTGCCTGGGACCAAATTACCCCACCAAACCCACAAAGAAAAAGAAGGTTTGGATCTGTACGAAGTGTGTTCGCTGCAAGAGCTGTGGATCTACGACTCCCGGCAAAGGGTGGGATGCACAGTGGTCTCACGATTTCTCACTGTGCCATGATTGTGCCAAACTCTTTGCTAAAGGAAACTTCTGCCCTCTCTGTGATAAGTGTTATGATGATGATGACTATGAGAGTAAGATGATGCAGTGTGGGAAATGTGATCGATGGGTCCATTCCAAATGTGAGAATCTTTCAGATGAGATGTATGAGATTCTGTCTAATCTGCCAGAGAGTGTGGCCTACACGTGTGTGAACTGCACAGAGCGGCACCCTGCGGAGTGGCGACTGGCCCTTGAGAAAGAGCTCCAGATCTCGCTGAAGCAAGTACTGACAGCCTTGTTGAACTCTCGGACCACCAGCCACCTGCTGCGCTACCGACAGGCTGCCAAACCTCCGGACTTAAATCCTGAGACAGAGGAGAGTATACCTTCTCGTAGCTCCCCAGAAGGACCTGATCCACCAGTGCTCACTGAGGTCAGCAAACAGGAAGATCAACAGCCTTTAGATCTGGAAGGAGTCAAGAGGAAAATGGACCAAGGGAACTACACATCTGTGTTGGAGTTCAGCGACGATATCGTGAAGATCATTCAAGCAGCCATTAATTCAGATGGAGGGCAGCCAGAGATTAAAAAAGCCAACAGCATGGTCAAGTCCTTCTTTATTCGGCAAATGGAACGTGTTTTTCCATGGTTCAGTGTCAAAAAGTCCAGGTTTTGGGAGCCAAATAAAGTATCAAGCAACAGTGGGATGTTACCAAACGCAGTGCTTCCACCTTCACTTGACCATAATTATGCTCAGTGGCAGGAGCGAGAGGAAAACAGCCACACTGAGCAGCCTCCTTTAATGAAGAAAATCATTCCAGCTCCCAAACCTAAAGGGCCTGGAGAACCAGACTCACCAACTCCTCTGCATCCTCCTACACCACCAATTTTGAGTACTGATAGGAGTCGAGAAGATAGTCCGGAACTGAACCCACCCCCAGGCATAGAAGATAACAGACAGTGTGCATTGTGTTTGACGTATGGTGACGACAGTGCTAATGATGCTGGCCGTTTGCTTTACATTGGCCAGAATGAATGGACACATGTAAATTGCGCTCTGTGGTCAGCAGAAGTGTTTGAAGACGATGATGGATCACTAAAGAATGTGCATATGGCTGTGATCAGGGGCAAGCAGCTGAGATGTGAATTCTGCCAAAAGCCAGGAGCCACTGTGGGTTGCTGCCTTACATCCTGCACCAGCAACTATCACTTCATGTGTTCCCGAGCCAAGAACTGTGTGTTTCTGGATGATAAAAAAGTGTATTGCCAACGACATCGGGATTTGATCAAAGGCGAGGTGGTTCCTGAGAATGGATTTGAAGTTTTTAGAAGAGTGTTTGTGGACTTTGAAGGAATCAGCTTGAGAAGGAAGTTTCTCAATGGATTAGAACCAGAAAATATCCACATGATGATTGGCTCCATGACAATTGACTGCTTAGGGATTCTGAATGATCTCTCTGACTGTGAGGATAAGCTCTTTCCTATTGGATATCAGTGTTCTCGGGTGTACTGGAGCACCACGGACGCCCGCAAGCGCTGCGTGTACACGTGCAAGATCGTCGAGTGCCGTCCCCCGGTGGTGGAGCCAGATATCAACAGCACTGTTGAACATGATGAAAACAGGACCATCGCTCACAGTCCACCGTCTTTTGCAGAAATTTCACCCAAGGAAAGTCAAAACACAGCAGAAATTGCACCCCTGCTACCGCAGAGTGTGGGGGGGACCACTGCCCCGGCGGCAGGCACTGCCACCATAAGCCAGGATACCAGCCACCTCACGACAGGGCCCGTGTCTGGCCTGGCCTCCAGTTCCTCCGTCCTGAACGTTGTATCCATGCAAACTACCACCGCCCCCACAAGTAGTGCATCTGTTCCAGGACACGTCGCGTTAACCAACCCCAGGTTGCTGGGTACCCCGGATATCGGCTCCATAAGCAATCTTCTAATCAAAGCCAGCCAGCAGAGCCTGGGGATTCAAGACCAGCCTGTGGCTTTACCGCCAAGTTCGGGAATGTTTCCACCACTGGGGACGTCACAGACTCCCTCCACGGGCGCGATGACGGCTGCACCCAGCATCTGTGTGCTCCCCTCTACCCAGACAGCGGGTGTCACAGCTGCTTCGCCTTCTGGGGAAGCAGAAGAACACTATCAGCTCCACCATGTGAACCAGCTCCTCGCCAGCAAAACTGGGGTTCTCTCTTCCCAACGGGATCTTGATTCTGCTCCAGGATCCCAGGGATCCAGCTTTACCCAGACAGTAGATGCTCCTAATCCCATGGGCCTGGAGCAGAACAAGGCTTTACCCTCAGCTATGCAAGCCAGCTCAGCCTCTCCAGGGGGTTCCCCATCCTCCGGACAGCGGTCAGCGAGTCCCTCAGTGCCGGGGCCCACGAAACCCAAACCAAAAATCAAACGGATTCAGCTGCCTTTGGACAAAGGGAGTGGCAAGAAGCACAAAGTTTCCCACTTGCGGACCAGTTCTTCTGAAGCACACATTCCAGACCAAGAAGCCAACACGACACCCCAGACCTCAGTCACAGGGACTCCAGGAGCAGAGGCTGAGCCGCAGGATACAGCTAGTGTGGAGCAGTCACCACAGAAGGAGTGTGGGCAGCCTGCAGCGCAAGTGGCTGCTCTTCCTGAGATTCAGACAACACAGAATCCAGCACATGAACCAGAAAATTCAGAACCTAAAACGGCGGAAGAGGAAGAAAGTAATTTCAGCTCTCCACTGATGCTTTGGCTCCAGCAAGAACAGAAGCGGAAAGAAAGCATTGCTGAGAAAAAGCCCAAGAAAGGACTTGTTTTTGAAATTTCAAGTGATGATGGCTTTCAGATATGTGCAGAAAGTATTGAAGATGCCTGGAAGTCGCTGACAGACAAAGTCCAGGAGGCTCGGTCCAACGCCCGCCTGAAGCAGCTCTCATTTGCAGGTGTGAACGGTTTGCGGATGCTGGGGATTCTCCATGACGCTGTTGTATTCCTGATTGAGCAACTGTCTGGTGCCAAGCACTGTAGGAATTACAAATTCCGTTTCCACAAACCAGAGGAGGCCAATGAGCCCCCACTGAACCCTCACGGCTCAGCCAGGGCTGAAGTCCACCTGAGGCAATCAGCCTTTGACATGTTTAACTTCCTGGCTTCTAAACACCGGCAGCCTCCTGAGTACAACCCCAATGACGAGGAAGAGGAGGAGGTGCAGCTGAAGTCAGCTCGGAGGGCAACTAGTATGGATCTACCAATGCCCATGCGTTTCCGGCACTTAAAAAAGACTTCTAAGGAGGCAGTTGGTGTCTACAGGTCTCCCATCCACGGCCGGGGTCTTTTTTGTAAGAGAAACATTGATGCAGGTGAGATGGTGATTGAGTATGCTGGCAACGTCATCCGTTCCATCCAGACTGACAAGCGAGAGAAGTACTATGACAGCAAGGGCATCGGCTGCTACATGTTCCGGATCGATGACTCTGAGGTGGTGGACGCCACCATGCACGGGAACGCCGCCCGCTTCATCAACCACTCATGTGAGCCCAACTGCTACTCTCGGGTCATCAACATCGACGGGCAGAAGCACATTGTCATCTTCGCCATGCGCAAGATCTACCGAGGGGAGGAACTCACTTACGACTATAAATTCCCCATTGAGGACGCCAGCAACAAGCTCCCCTGCAACTGTGGTGCCAAGAAATGCCGGAAGTTCCTAAACTAAAGCTGCTCTTCTCCCCAGTGTCGGAGTACTAGGACCCAGGGCCTCCACAGTGATGCCGAAGGCCTTTGCCAGCAGCCAGGTATTCCAGGATTGAGCGGGCACAGTTGAGGGGCCTCTGTGACGGCTGGGCTCCCTTGGGTCCCATATTCACATTCTACATGTGATCATAGTCCTGGAGAGAGATGAGGTCTAGAAGAAAAGATCCGCGATCGGCTTTCTACTGGGGCCCCTCTGATTGTGTGCCGTTAAAAAGTGGGGAAGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCCTGTAGAGAGTTAGTTGTGTAGGGAGATTGGCCTGAGCACCTCCTCAAAAGTTGCCATCCTCGTCTTGGCGTTTCCCAAGCACTGTAAGCGAGGGGTCAGGCACAGCCCTGGTGCGGGGTTGGTTGGAGACCTGACAGTTTGCCAGCCCGGCCCAGCCTGTAGCCATGTGTTGAACAAAGAGAGACGGTCTGGTGGTTTTCCCTACTATCCTCCCAGTTGAGAGTTCCCTTCTGGTTGGGAGACAGGATTCTTAGCACCTTTGGTGTCAAAAGCTGTCTTGGGGTTGTGCCAATTCATTACCAAACATTGAGCCTGTGGGCTTTAAGTGGGAGTGTTACCCCCATGAGCCTTATCTCAGTCAGTCACCTTCCTAGACAATAGGAGCGGCTTCCCTCTCATTCCTTCTCTTCACTCCACTTTCTCGTTTCCCCATTCTGCATCCCACCGCTTTCCCGTTCTCTCTGGGTGGTAGGGGAGAGTGACTCCCTGTGTAAGAACACTCCCTGTTGGGCATAGGATGTGCCTACAAGACGTTCCCTGAGCCTGTAAGCACTCCCAGTGGGAAAGTGGACAGGAGCCATTGGCCGTAACCAGACAGAATTTGGAGATGTTTTCATAAAGCTCCACTGAGAGTTTTAAAGAAATATATGTAGAAGAAGAAGATTATTTAAATAGGATTTGAATCATGCAACAGTCAGAGTTTCACAACCAGGATGACCCCTGGGTCCCATTCCTAGGACATGGTAACTTTATTTTCCCCTTGTTAAGACATAGGAAGACTTAATTTTTAAATGGTCAGTGTCCAGTTGAAGGCAGAACACTAATCAGATTTCAAGGCCCAAAACTTGGGGACTAGACCACCTTGTATCGAGGGACCTCTGCCACCTGTGCAAAATCTGTGGCTAAAGCAAATGAAATGAAATGACACTACTGCCCTGATTACTCCTTAGGATGTGGTCAAAACAGCATCAAATGTTTCTTCTCTTCTCTTCCCCAAGACGGTTCCTGAACCTGTTAAATTAAGTCATTGGATTTTACTCGGTTCTGTTTACAGTTTACTATTTAAGGTTTTATAAATGTAAATATATTTTGTATATTTTTCTATGAGAAGCACTTCATAGGGAGAAGCACTTATGACAAGGCTATTTTTTAAACCGCGGTATTATCCTAATTTAAAAGAAGATCGGTTTTTAATAATTTTTTATTTTCATAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCTGCCCAACTTCCCCCTGGAAGGTGTCCTTTTCGTTGTTTAATGTGTAGCTTGTTTGTGCCCTGTTGACATAAACGTTTCCTGGGTTTGCTCTTTGACAATAAGTGGAAAAGGAAGGTGCCCCCAGCTCCATCGGGCCACTCCCCTCCTTCTCCAGTCAAAGCTCCTGAATGGCTGCGGTAGGATCTCGACACAGCAGTTCCTTCTCCTCTTGCCTGCCTCTCTCCCTCCTTCCTGGCACAGCCCAGTGCTGAGAGGTGAGCGCCAGCACTTCCTGTCTTTCTTCTTTCAGAGTTAGCAACCAAGCTGAATGGCAACCTGATGTTTTCCATCACCATCTGCCTCGTAGGTCACCTCGTCCCCCTCTCTCTGCCCACCAAGTCCTCACGCCTGCAAAGACCCCCTGGGTCCCCCCCATGCCCTCTTTTGGGGCAGCTCGTTGAAACTGAAGCACAGTCTGACCACTCACGATAATGCAGATGCTCCTCGGCCTCTGTCAGCCACGAGGTTTCAGAGCAGCGTAGTCCAGTGGAGGGCAGGGCGCCTCTTCTCACCACAAGAAGCCCATTCCTCCAGAAGGAAGTCTAGCAAAGCAATACGACTCAGCCCAGCGCTCTCTGCCCCGGGACTCACGGCTCTGCTGTGCCTTCCACCCTGGGCTCCCTGTTCTTCCGTGACCTTAATTAAGAACTTTGGTGGCTCTGCTGGAACACTGTCACTGTTTTCTCTGTTGTGCAGGGAACCCAGCACTGTGGCCAGGATGGCAGAGTCTCCCTGTCATCTCAGAGAAGTGCCAGCAGGGGCCTGGGGCAAAGCAGTCTGCCCAGACCTCACCTCCCTTCCTCCTTTTGCCCGTGAACAAGATACAGTGGCCCAAGGGGTTCCACTGGTGTCTGGTTTCCTTTATTATTGCACTGTGTGAGGTTTTTTCGTATATCCTTTTATTCCTTTTTCTTTTTCTTTTTTTTTAAAGAAAAAAAAAAAAACCTTAAGCTGCATTTGTTACTGAAATGATTAATGCACTGACGGGTCATGAATTCACCTTGAGGAAGACCCAAAGGCCAGTCGGGAGTGGGGGAAACTCAGCTCAGTAGACCTAGTGACTGCCCTGCTAGGCCGTGCTGTACTGTGAGCCCCCTCCTCATCTCTTTCTACCAACCCCAAACCCTGAGGCCAGGGGAGGAACCCCCCGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTTGCCTTTCCACTCCCTAACTGTCAACCACAGAAATGAGGAGTTCCTCCTAGATCTCAGCCTTGAGTCCATTGCCAAAATTCAGCGTACCTGCCAGCAACTTGGGGATTAAGCTAAGGTTTTCCCTGCAAGAGGGAAAGAAGGCGGGAAAAAACAAAACAAAACCGGCATAGCTATCTCCAAGACACCTCTGAGTCTGTTGTGAAAGTGACCAAGGGAATCTCCGCACAAAAGTGCAGACTGAGGAACTGTGGTGGGTTGTTCCCAAGAATCCCCCAAGGGGCACCCCAAATCCCTAAGGAGTCACAGCTGCAAACCTGGTCAGTTCTCAGTGAGAGAGCCAGCTCACTTACAGCTTTGCTGCTAGAACCTGTTGTGGCTGCATTTCCTGGTGGCCAGTGACAACTGTGTAACCAGAGGAGCTGCATGGCGCTGACCTTTTGGCCGGAACTTGGTCCCTTTGGCTCCCCGTTACCGTCCGCCACCTCCAGCCCAGCCCCTCCTGTTTTTAGACCAATAACCAGAATCAAGGGGGAAGCCCTGGCAGC EMBV3_22371 TACCAGCGTTATGAGATCAAGATGACTAAGGTGTTTCCCTGCTCATCCATCCCCTGCAAA Variant GeneID:282092|TIMP1:NM_174471:27_cdna 284^535 1 EMBV3_28952 GeneID:282092 X GENE TIMP1 NULL TIMP metallopeptidase inhibitor 1 EMBV3_01918 ACACGGGTGCCTCTAGGACACTCAGGTGTTTCAGCAGAGATTGCAGATCCATCCTGGGCA Gene BVV0102_105100 + 0 NULL GK000011.2:94523380-94526959 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028836 TCONS_00028840 TCONS_00028835 TCONS_00028837 TCONS_00028838 TCONS_00028839 1 XLOC_015607 Coding TCONS_00028835 XLOC_015607 Coding Coding DENND1A 11:94525317-94610682 j TSS20190 4414 1 TCONS_00028835_2 656 10 0.948409165456164 0.000215224541519281 7.48984869992379e-05 0.000171292796068904 0.000117461888712988 1.06001584909252e-06 1.2756890596962e-158 1.67837028892298e-05 5.32906802449148e-05 1.92544533825835e-05 7.33875150789084e-287 0 0 1.20001843092581e-06 0 4.70516968932066e-65 0.00062006339458587 0.000191024564192185 8.03901164031104e-18 1.2981283300155e-249 0.00016835186820862 8.107532368935e-06 0.00051928003253339 0.000174645874200926 0.000249304306385419 1.46609893686631e-16 3.45465118579522e-22 1.89834352792396e-264 2.04569126513812e-25 2.30962403690185e-05 2.74393047308906e-179 XM_005213128.1 DENND1A PREDICTED: Bos taurus DENN/MADD domain containing 1A (DENND1A), 0.0 6109 100.00 0.767104666968736 NM_020946.1 DENND1A Homo sapiens DENN/MADD domain containing 1A (DENND1A), transcript 0.0 2897 79.18 0.763706388763027 TCONS_00028835_2 sp|Q8TEH3|DEN1A_HUMAN DEN1A_HUMAN DENN domain-containing protein 1A; 0.0 1025 85.22 0.998475609756098 0 coding 0 0 0 0 -0.0433205506277775 0.683028994147388 0.037087602569003 0.500407411138226 CTCCTCCAGAGCAAGTGAGCTTTGACGGTGTTGGTGACCTTTTGCAAGGTGGCAGAAGAAGGAACCCAGCCTTTGCACTTAAGACATGCACAGGTGGGAACCCCCTCCCACCACCTACCTGTGAGACGGTCTTGGGAGGAGCCAATCACCTTCTGCGAGGAAGCCTTCGTGTCGCACTATCGCTCAGGAGCCATGAGGCAGTTCCTGCAGAATGCCACCCAGCTGCAGCTCTTTAAACAGTTTATCGATGGTAGATTAGACCTTCTCAATTCTGGCGAGGGCTTCAGTGATGTTTTTGAAGAGGAGATCAACATGAGCGAGTATGCTGGGAGTGATAAGCTATACCACCAGTGGCTCTCCACAGTCCGGAAAGGAAGTGGAGCAATTTTGAATACTGTAAAAACGAAAGCAAACCCGGCCATGAAGACTGTCTATAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAGGTGAAAAACCGCTTGAAGCAAAAGGACATCACTGAGAATGGCTGTGCCCCCACCACAGAAGAGCAGCTGCCAAAGACTGTGCCGTCCCCACTGGTAGAGGCCAAGGACCCCAAGTTCCGAGAGGACCGGCGGCCAATCACAGTCCACTTTGGACAGGTGCGCCCTCCCCGTCCACACGTCGTTAAAAGACCGAAGAGCAACATCACAGTGGAAGCCCGAAGGACGTCCGTCTCGAGCCCCGACCAGCCACAGCCATATCGGACACTCAAGGAGTCAGACAGTGCAGGGGACGAGGCCGAAAGCCCGGAGCAGCGAGCGCGGGAGCCTGTGGGCCCCACCCCAGCTCCACACGACCGGGCCGCCAGCATCAACCTCCTGGAGGATGTCTTCAGCAACCTCGACATGGAAGTCCCGCTGCAGCAGCTGGGCCAGGCCAAAAGCTTGGAAGACCTTCGGACCCCCAAAGACCTGAGGGAGCAGCCGGGGACCTTTGACTATCAGAGGCTGGACCTGGGCAGAAGTGACAGGAGCCGTGGGACACCAGGGGCCTTGAAGCTCGCCCACCCGCACAGCAGGCTCTGGAGCCTAGGCCAGGATGACATGGCCATCCCCAGCAAGCCGCCCGCCGCCTGCCCCGAGAAGCCCTCAGCCCTGCTCGGGAACTCCCTGGCCTCACCCTGCAGGCCCCAGAACCAGAATGGCCTCCTGAACCCCAGCGACAAGGAGGAGGTGCCCACACCCACCCTGGGCAGCATCACTATCCCCCGGCCCCAGGGCAGGAAGACCCCAGAGCTGGGCATCGTGCCCCCGCCTCCTACTGCCCGCCCAGCCAAGCTCCAGGCCCCCGGCATCGCCCTTGGCGACTTCTTGGAACAACTGCCGGCTGAGCGGGAAAGGCGGGCTGCCCTCAGCTCAACCCCATTCCCTGGGCTCCTCTCCAGTGCTGCACCCCAAGACCCCACTGAACTGCTCCAGCCACTCAGCCTGGCCCCAGGGGCTGCCGGCAGCAGCAGTGATGCCCTGCTGGCCCTGCTGGATCCACTTAACACAACCTGGTCGGGCAGCTCCCTTCCACCAGGCCCTACAGCCCCAAATGTAGCCACCCCATTTACTCCCCAATTTAGTTTTCCCCCCATGGGGACCCCCACCCCATTTCCACAGCCATCACTCAACCCCTTTGTCCCACCTCTGCCAGCGACACTGCCCACCATGCCCCTGGTCTCTGCACCAGCTGGGCCTTTTGGGGCCCCTCCTGCTTCCCTGGGGCCAGCCTTTGCCCCCAGCCTCCTGCTGTCCAATTCTGGCTTCTGTGCCCCACATCGATCTCAGCCCAACCTGTCTGCCCTCTCCATGCCCAACCTCTTTGGCCAAGTGCCCATGGGTACCCACTCCCTGCAGCCTCTGGGTCCCCCAGCAGTCGCCCCCTCAAGGATCCGAACATTGCCCCTGGCCCGCTCAAGTGCCAGGGCCGCCGAGGCCAAGCAAGGGCTGGCCCTGAGGCCTGGAGAACCCCCACTCCTCCCAGCCAGGCCCCCCCAGGGCCTGGAGCCAGCACTGCAGCCCTCTGCTCCACGAGAGGCCAGAGACCCCTTTGAGGATTTGTTACGGAAAACCAAGCAAGATGTGAGCTCGGCCCCAGCCCCCGGCTCCGTGGAGCAGCTCAGGAAGCAATGGGAGACCTTCGAGTGAGCAGCGCTGAGGGTGGGGCGAGCCAAGGCCGGCCGGCCCTGCTTCCCCTGCTGCTGTTTCTACCCAGGTTCTACTGGTGGGAAGGGATGGGAACCCTCTCTGCCGCCCCTCCTCCTTTCCACACTGCCCATCTCTGGAGAATGGCGCCAGTTCCAGCCTGGGAATCGACCCAGCTCCTGGGTGCCTGTCCTGTCCCGACCCTTCCCCTGCCCCCCTAGTTGGGTTTTGCACTAAAGAGGTCAGCTGGGCCAGCGATTGCCCCAGGCCACATCTTACCCACCTTCCCTCTGGAAACTGCCCACCAGGAGCCCCGCGCGTCCTCAGGATGTCTCCTCCTGAGCCCCGTTCTCTTGCCCCAGCTGCAGCCCAGCCCGCACACCCCACCTTGATGGGCACGAGTGTTGGCGGTACACCAGCTCGTCTGCACGAGAGGCACGTGGTTTGGAGTTTGAAGTAAGGAACCCCCCTCCCCCACCCCTCCCCAGCTGGAGGATCTACCTGGCGAGGCATTTCCAAACCCTGTCTAGCAATATGCACACTCTTTCTTTACTGAGTCTTCACCCCAACCCCTCCACCTCCGTTTTTCTGACTTGGTTGGGATCTGGGGGCTGAGGGATCCACGGGATCCCTTGTGGTAACCAAACCAAGCCCCAGCCAGCCCTGCATGAGGGCCGGGAGCACCAGCAACTTTGATTATAGAAGACAAGACGGCAACAGGCAAACCCAAGAGCATTGGGACGGGTCCGGCCGCTGTCCACACTCTCATTGGGTCCCTAGAGGTTCTCCTGGTCTCCAGTTATGATCACATGAGGCTCAGACTCTTGTCGAGTGGGTCTCAGGGGGCAGAGCTGAGAAGCAGACACCCAGACCCCCACTGGAAGGCCAAGCTTACCACCACAGAGATGCAAGGGTCCCAGTGCCTGGCTCCTTGGGGCAGGAGGGGGCAGGGCACTAAGCCCCTCTCCAGGCCCCTGGTGAGTGAGCAGGCTTGGCTTCTGGCAGCCTGGAGGCAGGAGGGCTTGGAGTCACCCCCTCCCTGCCCACCTTGTGATTCCTGCCAGCATAGAAGTTCCTGAGGCCAACATCACCAAAGCTGAATTGAAATGTTTTGTTATTATTTCTTTTATCTTTCTTTTCCTTTTTACTTTTATTGATTTGATGGAATCTTGAAATTGACTAGTTTCAATAAACCAAGTTAAAATATGGCCCAACCATTTAAGAAAACAACCATCTGAGACATGCAGGAAATTGTGAACATTTTGACCTGATTTCTCATTTCCTATTTGTGAATGGTCAGACACACAGTCTCAGGGGTGTCTGAGGGGGCAAGGGGGTTTCTAGAGGCCCCTATAACCCCAGGGAGCCTTGTCATCATCTGAGGGACTGGGAGATCACCCCCACCCGTGAGTGAGCGAGGCCCGACCCTGAGGTTTGCTCCAACAGCATGGGGTGTGAAGGGCTGCTGGCCCCACACGAGCACCTTCGTCAGTCCCGGCCCCTGGGGCAAGTCCTCTCTTTCAGTCTCGCAATGTCCTCTGGCCACCGGAAGCAGGGCGCTGTGTCACGCCTGGGCCACACGGGTGCCTCTAGGACACTCAGGTGTTTCAGCAGAGATTGCAGATCCATCCTGGGCAGACCCCCGAGCCCTGTCCTGACGGGGGGCAGAGTCTTAAGGCAAGAGGTGCTCGGTGGCCTCAGGGAAGCCGAGCCCACCCCATGGTCTCCCTGGCTGGGGCCAGTGGCAAGAGCACCATGTTCACAAGAGCACTGCTGTCTCTTCCCTTGCTGGACTGAGTCTGCAAATCCAAGGATGAATTTTGTGTGTGCGTTCAATAAAATCTTCTTGGAGAGAAACTGGTATCCCTGTGTCCTGAGGAAGCTCTGCAGGGAGGGGACTCCACCTCGGGGAACCTTCAGCATCTGCGTTTGTAGAGGTAGAGGCAGGACCCATGTAGTCGTCAGGAAGGCTTTGACCCTGGCCCGCCCCCAAGCCTGTTCCCATTCAGGCCTCTGAGGGATAGGCTGGTCACAGTTGGGCACAGGGCTGCCGGGCCCCACACAGCAGGGCTCCAGGTCACCAATGACGTCAAAGGCACCTTGGCTCCAGGAAAAGTAAAGCTCAAGGGGATACCTGGAACCACCTCTTATTAGCAAGGGCAGAGCCTGGGAAACTGCACCTCTTGGCTGGGTTGGAGAGGATACCTGAACCAAGCACCCAAAGTGGATGTTAAGGGTGTCCCCACCCTTAACT EMBV3_10884 TCATTGAAAAGAGTGGGGAGCTCAGGAAGGAGATTAGCAGCAACACGGAGCAGCTTCAGT Gene GeneID:788382|KRT12:XM_002696010:424_cdna Constitutive 0 NULL GeneID:788382 19 GENE KRT12 NULL keratin 12 EMBV3_30342 GCTCTTGAGCACATCTACTGCATCTGAATGGTGTACTACCGAGCATCCTTTCCCACTCTG Gene BVT0102_090131 + 0 NULL GK000030.2:83678027-84029842 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03231 TCAAAATAGAACCAGCTGAGGAGACTCCAGCGGGGGAAGAGGGTAGTAATTCTCCAGAAG Gene GeneID:527597|TRPM6:XM_002689663:75_cdna Constitutive 0 NULL GeneID:527597 8 GENE TRPM6 NULL transient receptor potential cation channel, subfamily M, member 6 EMBV3_40371 TATACCTTCCCCTATGACTGTGACCTTTTCCCTCCTTGCTCCAAGCTTCCAGAGGGTGAG Gene BVT0102_325819 - 1 EMBV3_41744 GK000007.2:18187954-18191584 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00206 GTAAACTAACCACAGTTCTCTCCCTCTTCAACGGTACCTCAAGTTGCTGGAGCCTGTCTG Gene GeneID:534739|ANKRD12:XM_002697743:242_cdna UTR3_Alt 2 NULL GeneID:534739 24 GENE ANKRD12 NULL ankyrin repeat domain 12 EMBV3_40247 CTGAAAGGAGAAGTGGCCCAGATGGCAGCTTACTATGAACATCGTCTACAACTGGGTAGC Gene GeneID:515602|RFC3:NM_001038547:112_cdna Constitutive 0 NULL GeneID:515602 12 GENE RFC3 MGC133920 replication factor C (activator 1) 3, 38kDa EMBV3_20324 CCATGGGATCACTGACTTGAAACACCTGGGTGGAGGAAGTAACTCAGCAAAACTCGTCTG Gene BVV0102_085781 + 0 NULL GK000025.2:27738206-27748843 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00148924 1 XLOC_090804 NonCoding TCONS_00148924 XLOC_090804 NonCoding NonCoding - 25:27746820-27748177 - TSS111459 1357 2 TCONS_00148924_5 111 0.110537951363301 1 0 0 0 0 0 0 0 0 0 1.16287839225315e-05 2.72884749827269e-05 1.51825090471817e-05 0.000147559545995691 4.65175941796513e-05 0.000852750551007441 7.23097781753151e-05 0.00184900752059302 6.11727607451988e-05 0.000776579363485099 0 0 0 0.00042653821431062 0.000223097444369482 0.00033356254824239 0 0 0 0.00110420556838192 0.000186027787822083 0 XR_229845.1 LOC101905312 PREDICTED: Bos taurus zinc finger protein 629-like (LOC101905312), 0.0 1772 100.00 0.722918201915991 0 noncoding 0 0 0 0 0.051384040378317 0.658316524110376 0.0164710815724584 0.744952976729718 AGGCCAAAACTAACGTGTTTACCGTCTCTGCCCTGAACACTGGTCACCTGCCTGGGCGGTGACACTGCCTCCCTCCCAGCTCAGGGCACAGTAAATGCTGAATAAACCCCAGTTCCTGTTTCCAAGGTCCGGTCTGCCTCCCTGCTCCAGGAAGAACCTGTTTCTACAACTGAGAGGATGGAGCGCAGGGCTACTTACATTAAGGTGAGAACCAGCTTCAGTTGATGGAAAGAGATTTTGCGAACAGATCCCCCTCCCATGCCCATCTCCACCATGAACCTCACGACCATCTGCACCTACAATTTTGCAGAGAACAGAATCCAGCTTTGAGGAAGCTGAGGCCCCAAGGCCACGAGTAAGAGTATAAACAGGAGCTGATCATAACATCCATTTATTGAGTGCTTACTACGGATGTGCCCAGCTCAGGCCTCCCGCTCAAACCCTGGTTTGTGCTCTTTGAAATGGTGTCAACAACGGGGAACATTCCAGAACCCTTCCCTTCATCACAGACCCAGATTGAGGAGACAAGTGGCATCCATTAGATGCACCTTCACGAAGCCTCTTAAGACTTGCTGCAAGTGATGCCCTTTCTCCAGCGCCGGAACTGGGTTCGGGTCCATCTCCTTCATGACACCATGCTACCCCAGGACTGGGGCTATCTCACTCATTTCTGTAACCTTCAGGAGGAGGCAAAAAGTGCACTGGTGCGATGCCTGCAGACTGACACCCCCAGTGACAGGGTTGGCAAGCAGAGTTGGCAGACGAGTTTTGCTGAGTTACTTCCTCCACCCAGGTGTTTCAAGTCAGTGATCCCATGGGAGCTTACTACCATCCTGGGAGGCAACATCACCCTCAGTTTTACAGATGAAGAAACTGAAGCTCAGAAGAGGCAGACCTGTCCAAGGTCATGCAGTTAGGAAGAGATATTCTGTGCTAGAAGCTCACATCCCTTCCCTTCGGCCCTTATTCTCTGCGGTGCAGTTCTAGATGCACCGAGCTGCTAAGAGGCAAGATTTTGGGACAAGGCACCAGAGGTGTGGGTCTCATGATTCCTTGGGGCAGGCACCAGGCCTCCCCCAACCTCAAAAGGGCTACGTTCCGTGCCCCTCCCAGGAACAGAGCCGGCTACAGGGAGGACAGCAGAGCCTCACAGCTTAGCCTCTGCTCTGGGCGAACATTGTGCTGTGCTTCGAGAAGCCTCCCTCTGGCTCCCATAGACTGTTTTACCAACAGAAACACGTTTGTTTACATAGGCAGCCCACCCCAATGGTCAAACTACAGTGCTATGTCCAGTCCCCAGTGTCTGGGCACACTAGATTGTCACCATTTTCTCCTCTTTGAGGGATCAGAGAAAAAA TCONS_00145009 TCONS_00145010 . 5' 2719 TCONS_00145009 TCONS_00145010 . 5' 2719 EMBV3_35956 AAGAAGCCAGTGTGTTCTGGACAGCTCCCAGAGGAGGGGAAAGCCCCAAAGCACCCAATT Gene BVT0102_427821 + 0 NULL GK000005.2:76175970-76266276 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195630 1 XLOC_118108 NonCoding TCONS_00195630 XLOC_118108 NonCoding NonCoding - 5:76256283-76261423 - TSS145750 489 1 TCONS_00195630_1 33 0.0797546012269939 3 0.905429071803853 0 0 0 0 0 0.000168246232583158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0922231337724634 0.496820419074799 -0.00719921195232087 0.874010601331314 GTGGCAGAAAAGGCTTTTGGAATTTGAGACCTTGCTCTAGCACTGACTAGATGTGTAGCCTTGTGCCTGCTGTTTAGCTTTCAGAATCTCAGTTCCCTAATCTGAGGAGTGGGAGTGATTACATCCTTCCGTCAGCCCGGTCCAGGGGCACAGCCCCAGCACCATTCACTCACTCATAGATTCACATTCATTCATTCACATTACATTTATGCCAGGTGAAGCCATCCAGGAAGCCCCAGCCTACCCTGACTAATACTAATACAGGGAGATACAGCAAACAGTTCATCTAGTCCAACTTCTTACCCAACAAAGGAACCCCGGATCACCCAAGCACTGCTGATTCCTCCAATGATGACAGTTTGACATTATCTCAAATGGCAGCAAAGCCATGATGCATCTTAGAAGTCACCTAAATTGGGTGCTTTGGGGCTTTCCCCTCCTCTGGGAGCTGTCCAGAACACACTGGCTTCTTCCTCACCACCTGAGATT TCONS_00195631 s 3' 9786 TCONS_00195631 s 3' 4854 EMBV3_31913 CCAGCTCAAGGGAGAACCGACGTTGAACAGGGTCCTTAGTCCACTTTTATAGCCAGGGTA Gene BVV0102_364550 + 1 EMBV3_23155 GK000016.2:2734830-2763987 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00200979 TCONS_00154785 TCONS_00070718 3 XLOC_122629 XLOC_094540 XLOC_042496 NonCoding TCONS_00154785 XLOC_094540 NonCoding NonCoding - 27:49931-88820 - TSS115953 517 0.769825918762089 3 0.986782555029829 0 0.00046646538854255 0.000268491089726738 0.000949775724635992 1.83762090053175e-10 0 0 0 0 0 0 0 0 0 8.24680650743402e-05 0 0 0 0 0.000125189328566791 0.000440386149557819 0 0 3.24268608108645e-05 0 0 0 0 0 0 XR_229235.1 LOC101905472 PREDICTED: Bos taurus uncharacterized LOC101905472 (LOC101905472), 1e-104 383 84.34 0.688588007736944 0 noncoding GCGGACAGCGCTGCCCGAGCCTCCCTGGCCGCCCGCCGGCCTCCCCGCGTCCCCAGGTTCCATTCTGTTACAGGTCATTGCAGAGTACTGTGTAGAGTTCCCTGTGCCAGACGGTTTCGTGGTGACCCAAGGAGGAAAGAGCAGATGAAACCAAGGAGGGTCTTGGAAGCGGGACTGGAAAGACCAGACCCTGTTTTCCCTCCCTCCCCCATGCTGTAACTGTTATTGGATCTCAGGGCCTCCTGACCTGCGGAACCTGTCTCCCCTCCTACCCCACAGGGAGAAGGCATTTGCCTTACTCTTCCCCACCCAGTCTACGTGCCTCATCCAATCAGCAAACGACCTGCGAGGCCCCTGTCCCACTCCTTGTACCCTGGCTATAGAAGCGGACTAAGGACCCCGATCGACGTCGGTTCTCCCTTGAGCTGGCCCACTGTTCCAACAGGGTCTCCCACTCTAAAACTTGACTCCCTTCTTATTCTGTCTCATGTCTGGAAATTCTTTTCCAACCTGCGCC TCONS_00154783 s 3' 7046 TCONS_00154783 s 3' 7046 EMBV3_12598 ACCCTCAAGCTGGTTCCGTGCAGACTGGAGGTACTGTCACTTGCTATGAAAATAGAATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07238 GAGGTCCCACAGTGAGGCAATGAACTTCAAATTGGGGTATGGAGGAATGAGTCGTTGGAG Gene BVV0101_019235 + 0 NULL GK000030.2:55213508-55218460 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246989 TCONS_00246988 1 XLOC_151185 Coding TCONS_00246988 XLOC_151185 Coding Coding LOC100847901 X:55210082-55220782 = TSS185064 9595 1 TCONS_00246988_2 181 0.49421573736321 4 0.103561080474811 1.52807753191476e-05 5.80884890915685e-05 3.839820510603e-06 9.8048926937716e-07 3.02712231018625e-05 7.2749017194065e-06 1.11522943111391e-06 4.21932652654304e-06 3.62839908687188e-05 0.000814933690345264 0.000195499243201005 0.000175648837933113 1.96755739596803e-09 0.000101212166706602 0.000106736043438664 0.00938696199323782 0.00515649207365317 0.00815117080406808 4.03320271505387e-05 2.46971612157889e-05 2.52867048334577e-06 0.00656770167104741 0.00542338509652572 0.00890293917127548 8.45248736628309e-07 1.48576394373435e-05 3.98653058277983e-05 0.000885248820311751 0.000744826754865445 0.00115955219801025 NM_001192736.1 GLA Bos taurus galactosidase, alpha (GLA), mRNA. 0.0 2150 99.75 0.125169359041167 NM_000169.2 GLA Homo sapiens galactosidase, alpha (GLA), mRNA. 0.0 715 85.55 0.0648254299114122 TCONS_00246988_2 sp|P06280|AGAL_HUMAN AGAL_HUMAN Alpha-galactosidase A; 1e-92 281 81.21 0.906077348066298 0 coding 0 0 0 0 -0.0166433441011108 0.886811195470618 0.0488499037792938 0.508330506399079 ATGCATCCCCCGCACCCCAATTACACAGAAATCCGAGAGTACTGCAATCACTGGAGAAATTTTGCTGACATTTATGATTCTTGGGAAAGTATAAGGAAAACCTTGGACTGGACATCTTCTAACCAGAAGATAATTGTTCCTGTTGCAGGACCAGGAGGTTGGAATGACCCAGATATGTTGGTGATTGGCAACTTTGGCCTCAGCCGGGATCAGCAAATAACTCAGATGGCCCTCTGGGCTATCATGGCGGCTCCGTTACTCATGTCCAATGATCTCCGACACATCAGCCCTGAAGCCAAAGCCCTTCTTCACGATAAGGATGTAATTGCCATCAACCAGGACCGCTTAGGCAAACAGGGTTACTGGCTTACAAAGGAGGACAACTTTGAGATGTGGGAACGCCCTCTCTTGAACTTAGCATGGGCTGTGGCTATAGTAAACCTGCAAGAGATTGGTGGACCTCGTTCTTACACCATCTCTGTTACTTCCTTGGGTCGAGGACTGGCCTGCCAATCCCAACTGCCTGATCACAGAACTCCTGCCTGAGAAGAGGAAGCTTGGGATTTATGAATGGACTTCAACTTTAAAAACTCAAATAAATCCCACAGGCACGGTTTTGCTTAGGCTAGAAACAACAAGCTCAGCTCAGTTCAGTCACTCAGTTGTGTCTGACTTTTTGTGACCCCATGGACTGCAGCATGCCAGGCTTCCCTGTCCATCACCAACTCCAGGAGCTTACTCAAACTCATGTCCATTGAGTGGGTGATACCATCCAACCATCTCATCCTCTGTCGTCCTTCTCCTCTCGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGCTCTTTGCATCAGGTGGCCAACGTATAGGAGCTTCAGCATTAGTCTTTCCAATGAATATTCAGGACTGATTTCCTTTAGTATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACCCCACAGTTCAAAGGCATCAATTCTTCAGCACTCAGCTTTCTTTATAGTCCAACACTCACATCCATACATGACTACTGGAAAAACCATAGCTTTGACTAGACTTCGTTGGCAAAGTAATGTCTCTGCTTTTTAATATGGTGTCTAGGTTGGTCATAGCTTTTCTTCCAGAGCAAGCATCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCCCCAAAATAAAAGCCTGTCACTGTTTCCATTGTTTCCCCATCTATTTGCCATGAGGTGATGGGACCAGATGCCATCTTAGTTTTCTGAATGTTGAGTTTTAAGCCAACTTTTTCACTCCTCTTTCACTTTCATCCAGGGGCTCTTCAGGTTTTCTTTGCTTTCTGCCATAAGGGTAGTGTCATTTGCATATCTGAGGTTATTGATATTTCTCCCAGCAATCTTGATTCCAGTTTATGCTTCATCCAGCCCAGCATTTCACATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAACATACAGCCTTGACGTACTCCTTTCCCAATTTGGGACCAGTCTGTTGTTCCATGTCTAGTTCTAACTGTTGCTTCTTGACCTGCATACAGATTTCTCAGGAGGCAGATCAGATGGTCTGGTATTCCCATCTCTTTTAGAATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGGTATAGTCAATAAAACAGAAGTAGATGTTTTTTTGGAACTCCCTTGCTTTTCTGATGATCCAGCAGATGTTGGCAATTTGATCTCTGGTTGCTCTGGCTTTTCTAAATCCAGCTTGAACACCTGGAAGTTCATGGTTCACATACTGTTGAAGCCTGGCTTGGAGGATTTTGAGCATTATTTTGCTTGTGTGTGAGATGAGTGCAACTGTGCTGTAGTTTGAACATTCTTTGGCATTGGCTTTCTTTGGGATTGGAATGAAAACGGACCTTTTCCAGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCTGCACTTTCACAGCATCATCTTTTAGGATTTGAAATAGCTCATCTGGAATTCCATCACCTCGACTAGCTTTATTCGTAGTGTTGCTTCCTAAGGCCCTGTTGACTTCTCATTCCAGGATGTCTGGCTCTAGGTGAGTGATTACATCGTCATGATTATCTGGGTCATGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAGTATATTCTGCTTCTGTTAGGTACATACCATTTCTGTCCTTTATTGTGCCCATCTTTACATGAAATGTTCCCTTTGTATCTCTAATTTTCTTGAAGAGATCTCTAGTCTTTCCCATTCTGTTGTTTTCCTCTATTTCTTTGCATTGATCGCTGAGGAAGGCTTTCTCTCTCCTTGCTATTCTTTGGAATTCTGCATTCAAATGGGTATATCTTTCCTTTTCTCCTTTGCCTTTAGCTTCTTTTCTTTTCTCAGATATTTGTAAGTCCTCCTCAGACAACCATTTTGCCTTTTTGCATTTCTTTTTCTTGGAGATGGTCTTGATCACTGCCTTCTGTACAATGTCACAAACCTCCATCCATAGTTCTTCTGGCACTCTATCAGGTATAATCCCTTGAATCTATTTGTCACTTCCACTGTATAATTGTAAAAAATTTTATTTAGGTCATACCTGAATGGTCTAGTGGTTTTCCTTACTTTCTTCAACTTAAGTCTAAATTTGTCAATAAGGTGTTCATCTGAGCCAGTCAGCTCCCGTCTTGTTTTTGCTGACTGTATAGAGCCTCTCCATCTTTGGCTGTAAAGAATATAATCAATCTGATTTCTGTACTGACCATCTGGTTATGTCCATGTGTAGTCTTCTCTTGTGTTGTTGGAAGAGGGTGTTTGTTATGACCAGTGTGTTCTCTTGGCAAAACTGTTAGCCTTTGCCCTGCTTCATTCTGTAAGGCCAAATTTGCCTGTTACTCCAGGCATCTTTTGACTTCCTGCTTTTGCATTCCAGTCCCATATAATGAAAGGGACATCTTTTGGGCGTGTTAATTCTAGAAGGTCTTGTAGGTCTTCGTAGAACCATTCAACTTCAGCCTCTTCAGCATTGTTGGTTGGGGCATAGACTTGGATTATTACTGTGATATTGAATGGTTTGCCTTGGAAATGAACAGAGGTCATTCTGTCATTTTTGAGATTGCAAGCTAGACTGCATTAAAAAGCTTCCTTTACAAGTGACTACCCTGCTTTTGTCCATCTTCAGCTGTTTTTATTTCCTTGAGTAAGATTTTCCACATTTGAGCCATCTGAAAACATTTTGGGGAGAAGCCTTCGAACCAGATATGAATAGCTGAGAAAGAATAGCTTAGTAATATTAATAAGTAAAATAATAATTAACAGACATACATCATTTCGTTGCATTTAACAAATACTGTGGGGGTTTGGGGTTTTTTTCACAAATTTAAAGTTTGTGGCAACCCTGCGTCTGTCACAAGTCTGTCGACCCTATTTTTCCAACAGCATTTACTCACTTCATGTCTCTGTGTCACATTTTGGTAATTCCCGCAATATTTCAACCTTTTTCACTATTATTGTATTTATCATGGTGATTGTGATTTACTATGGCAAAAAATATTGACTCACTTAAGATTTAGATGCTAGTTAGCAATAAAGTTTTTTTTTTTTTTTTAATTTTATATCCCGCGGCTCCATCCGGCCCTAGCCCCGGCCAGCGGCGGGCCCGCGGGAGACACCCATGCTGGGCCGGCGGCCGGGGCTCAGCACGCCGGCTCCTCCGCAATAAAGTATTTTTAATGCATCTGTTGTTTTAAACATAATGCTATTGCTAATATTTAATAGATTACAGTATAAATGTTGAGTTCTATGTGCACTGGAAAACCAAAAAACTGGTGACTACCTTTTTATCTGTTGCCTGTATTGGAACTACAGACCAGGCACTATTCTAGATGCACAAGGTGTACTGACCTCACAACAACCCTGATGCAGGTACTTAATCACTGTAAATTACAGCCAGGAATTTAAACCAAGGCTGGTGGCTCAACTGGTGACGAATCCACCTACAATGCGGGGAGACCCCAGTTCAATTCCTGGGTCGGAAGATCCCCTGGAGAAGGGATAGGCTGCCCACTCCAGCATTCTTGGACTTCCCAGGTGGCTCAGCTGGTAAAGAATCCACCTGCAGTGCAGGAGACCTGGGTTCGATCCCTGGGCTGGGAAGATCTCCTGGAGAAGGGAACAGCTATCCACTCCAGTATTCTGGCCTGGAGAATCCCATGGACTGTATAGTCCACAGAGTGCCAAAACGTTGGACACAACTGAGCGACTTTCACTTTTTAACCCTTACATCGCTACTTACTTGGATGGCACTAATTCTTAGCCTAAAGGCCAGTACTTTGGCCACCTGATGCAAAGAAAGAGCCAACTCATTGGAAAATACCCTGATGCTGGGAAAGACTGAAGGCAGGACAAGGGGGCGACAGAGGATGAGATGGTAGGATGGCATCACCAACTCAATGGACATGAGTTTGAGCAAACTCTGGGAATAGTGAAGGGCAGGGAAACCTGGCATGCTGCAGTCCATGGGGTCGCAGGGTCAGACACAACTGAGTGATTGAAATGAACTGAAAGAGAATATACTTTCTCAGTTGAAGGGAAAAAAAAAACCTAGCAGGAATACCCTTCATAATGGATGATTTAGAGGCAACCCATGCATGTGTACTCATTTGCTTCAGTTGTGTACTACTCTTTGCAACCCTGTGGACTATACCCCACCAGGCTCCTCTGTCCTTGGGATTCTCCAGGCAAGAATACTGGAATGGGTTGCTATGCCCTCCTCCAGGGGATACTCCCATCCCAAGGATCGAACCAGTGTCTAGTACGTCTCCTGAAAAGGTGGGTTCTTTACCACTCACTATGCCACGTGGGAGGCAATCCAACAGACCACATTACTGAATTTTTATGGGAGAATCTTGTCAGGAAACACCCCTACACACACACTTAACTTTCTAAATCTAGAAACAGTTGTTTTTATAATCTAGGTCCAACAAATGCAAATGGCTTTCTTTCACCAACAACAGTTGGTACATTATGACCTAAAATACCAAACATCTGGACAGAAGACCCCCTCCGCTCTAAGATAGATTGCCTTATCTTGAGGTCCCACAGTGAGGCAATGAACTTCAAATTGGGGTATGGAGGAATGAGTCGTTGGAGGATTTCCAACCTTCCTTTTCCTCTCATTGGTTTACCTAAAGACCAACCTAATGCTTCAGGCCTGCCCCTTCTCCACTTCCCCTTTTCCCACATAAGCAAAAAAGCTATTCAGCTCACCCATCATGAATGCAGGACAGTACAAAAGGCAAAACACAATGTGCATGTTGTAACAATTCTTGGGCTGTCAGGTGCAACTTTTTTTCATAAAACTCGAGGACTATTAACTAAAATTGTCAGTTAATAAAATTGGAATAGAATTTGCAAATCCAAGACTTAATTCATCCACAGAAACCAGAAACTAATTTGGAAGGAAACACCTCCATCTCCAGTTACCAAAATGCATAGCTTTTTTGCTTCACCTCCAGTTTTGCTGCACAAGAATGAGGAATACAAAAGCATACAGAGGATTCCAACTGTTAGGCATTTTACAACGTGAATAGGTCATTCCCCATAGATTCCACTGATTAAAATAACTTTTTTATCTACTTTAAAATTTGAGGAAGTTTAGGTGGGATGAGAGTAAGTCTAATACATATAAGGGCTTCCCTGGTGGTGCAGTGGTAACGAATCCACCTGCCAAGCAGGAGACTGGGATTCAATCCCTGGGTTGGAAAGATTCCCTGGGGAAGGAAATGGCAACCCATTCCAGTTTTCTTGCCTGGAGAATCCCATGGACAAGAGAGGAGCCTGGCAGGCTACTTAGTAGTAAACATGTGAGACAAATTATGTCATGCCTGGTGAACCCCATATTCAATATGGACATAATTGGTACTAATCTTGTCCTATGAGCAAAGTTTCAGGTCTCTACTTATATTCCATGATAACCAGTAACAGCTTTTTAACAATAAGTGCTGAAAGTACCAAACCCATCACAGCATCTGATGTGAGTTCAACCAGTCAGACTGAACTCCTAATGAGTCAAGAATCCAAAACCATCAAGCATAAATAAGAGGATTTTATTGATGGCATTTTTATTGTCTTCATAATAAAACAAAATATGAAGCTCAAAACTGGATCACTTGGCCCTGCAATAGAACAGGAAAAAAAAGTGAGTTTTTATATTTTGTGAAGAATCTTTACTCCATCAAGAATAGTGTCTATTCCTAAAAGGATCACTATCCCTAATTAAAAACCAGTCTTTTCATTTCCCCCTTCTTACATTAAAACTCCAAAATCTATGGATCTTTGTTATATTGAGAGGAATGACTGCCCCTGATCTTAATGAGGGGCCACAAAAAATGAGTAGGCAGAAATCTTCACCTCTCAACATTCCAATACCTCTCAACATCTTCCCTGGTAGCTCAGATGGTAAAGCATCTGCCTACAATGCGGGAGACCCAGGTTCAATCTCTGGGTCAGGAAGATCTCCTGGAAAAGGAAATGGCAACCCACTCCCGTATTCTTGCCTGGAAAACCCCATGGATGGAGGAGCCTGCTAGGCTACAGTCCATGGGGTTGCAAAGAGTTGGACATGACTGAGTGACTTCACTTTCTTTTCTTTCAACATTACAAAACCATATAGAAAAGATTGCACCTTTCACCCCATAATTACATACCTTTCTCTTCTTATCACCTCCCAGCTCAAAATGCTTGCATCTCTTAATAGCCAGCATTCTCTTTGATCTACAGTTGGGCTCAACACATTCAAGCCTCAGTACAATCTTCTTTGTAGTTTTAGCCTGGAAAAATAACTCAAAGCCTTCATAAATCCTGCAGAAAATCCTTCTTCAAAAATATGACTATGCTGGGTCAAGTACTACATAAAGCAAAGCTCTGCAAATTTTAAGAGTTGTGACAATTGTGAAAGTAAGTAGATGCTGTGGTGACCCAAGGAGGGTCTTGGAACGCAGAAACAGAAAAACAAAACCCTTATCATCCTTCCCTCCATGTTGTAACTATTAATGGATTTCAGTTCCTCCTGAGCAGTATAAACTGTCTCCCTTCCTACCCCATAGGGAGAAGGTATTTGCCTTACTCTTCCCCCTACCCAGTATACATGCCTCATCCAATCAGCAAATGACCCACAAGACCCCTATCCCACTCCTTGTACCCTGAGTATAAAAGTGGACTAAGGACCCCTGTTCAACGTCAGTTCTCCCTTGAGCTAGCCTGCTGTTCTAACAGTGTCTCCCATTCTAATAAACTTTATTTCCCACTCATTCTGTCTCATGTCTTGAAATTCTTTTCCAACCCACACCTGGACCACGACAGATGTAAGAGAAAATAGTGGCATTACTACTTGAAATCAAGTTCTCCATTCAAATCAAATATCATAGAGGGTTTCTTATCAAATGGGCCCTCATCATACCACCTTGGCCTTTTAGCAGTTAAGTATTCTCCACAGGCAAAAATGGGTCAACTGAGTCCATGCAACTATACTTCAAACAGCGTTTGCAACCCAATAAACAAGGTTAATAAGTATTAATTTGGGACTTCCCTGGTGGCTCAGACGGTTAAGCGTCCGTCTACAATGTGGGAGACCCGGATTCAATCCCTGGATCGGGAAGGTCCCTCCACTCCAGTACTATTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAAGAGACACGACTGACGATCTTCACCTTAAATCTACTCTTCAGAGACTACTAACAATTACATCGAGATTTTATATGATATTATGTAACTCAGAAAGTACACTTCCCACAAATACTCAACTTTTAAAGCCTGCTCCTGTAGTCAGAATTCTATTGTTACTAGTTTGCAGTTCTGAAAAGGGCAAAAACATAGATGCAATGTCCCCATCTCCTAAACAAGCTATCCAAATGTGGAAATGGAAATTACCACCTTGAGATCAAACCATTTACTGTATCTAAATGAACACTGAAATCATTCCTGAATACTTTCTGGAACCAGGCTGAATGAGGAGCTAAGTGCCAAAAGAAATGCTGTTTGTGGGAAGGCTATGCTCCAAGCATTGTGTACTTTAAGGGGTAGACAAATCGGAACAGAAACTCAGAAATTCAGACTGAGAACCACAGGTTATTTAGGAAGTCAGTGGCAGACCTAAATGGCTATTTTAAAGAACTTTTAAGACTTCATCAGGTAAGTAGCTGACTTCAGGCTTCTGAACAGAACTGAAACACGAAATAAGTGAAAGATTCTTACCGCAAGCGTAAGGACTCCTTAGGACATGACAACAGATAAGAACAGGACAAAGGAAAGGATTTACAGTTGTACTCAAACTTCAGTCCTTAGGAAAGCAGGTCTTATTCCTTGATGTTTGCCTCTTCACAAAGAGGAGGACAAAAAATATAAAAAACAGTGAGGCAGTGCAATACTGTACTCTGCAGTAAGACCTGGACTGCACTCCCAGCTACTAGATGTCTCCACTGGTAACTGAGGTAACTTCACTGAAACTATAAAAACACACACCTATACTCTAGACGTGTGTGGGCTAAAAACAAATGTAAAGTCTCTGCCACGGTCAGTGAGAAAAGCATATCAAACAGTAATTATTACGAACCTTTTTCCGGAAAATCGGCTTAGTCTGCCCACCATAGCCACTCTGTTTCCTGTCATAACGCCGCTTTCCTGGGAGAATGCAAGGTATTTGTCAGGGTTTATCAAACATAACCAATCAGAACAGACATGTGAAAAAGTCTTCTCATCGATTGTATCTTGGACTTTCCAGCAGAAATATCAATGCCCAAATGAGAAAGGGAAGGGAGACTGGGCTCGCGTATTCTATTACTACACAAATACCGCATTAAAACCAAATCACGTACAAACCATCTTACCCTGGGCATACAGAGAATCCTTGCCCTTCTTGTACTGTGTCACTTTGTGGGGCTGGTGCTTCCCACACTTCTTACAGAAAGTCCGGCGGGTTTTTGGAACGTTCACCTAGTAAATAAACCGTTGAGAACATACAGTGATATCAGACCACCGGCACAAAGCCCAACCCGACCCAGCTGAAGCTACGGCATCCCACGAGGACTTTCAAACTCCTCGCCAACATACAACACTGACTATAAGGTGGTCTAGCCCCATGTACTTCAAGTATAGCGGCCTCTGCCGAGTCCCAAACTAAAACAAAAACATATTCCCTCTACCGCTGCCTAGGTCTACCCCTTAGATCTCATCACTTCAATTCCTGGCCCCGAAGCTCAGTCCCTTTGGGCTCGACCCTGGCAACACTGTGTTCCTTTGGTACAACGAGTCCACGCAGGAGCCCGGACGCATCCCGAGACAACACCATCAACAGAGAGGCAAAGATTAAACTGGATGTTACCAGACCCCACTCCAAGGCCCTACCATGTTTGCGAGAGCGATACCAGCACAGAAAGAAAGAGACCGGGCCGGAAACGGAAG EMBV3_10872 AAAAGTGGAAGATGGGCTGCATGGGAGGCATGAGATACATCTTTTCCTTATTGCTGTTCT Gene GeneID:100336905|LOC100336905:XM_002699874:94_cdna Constitutive 0 NULL GeneID:100336905 X GENE LOC100336905 NULL hypothetical protein LOC100336905 EMBV3_37760 ATGGTACCTGGACACCACATCGTTTCTATTGAGGTGCAAAGAGAGAGCCTGGCGGGGCCT Gene GeneID:538931|MGC133554:XR_082714:283_cdna Constitutive 0 NULL GeneID:538931 19 GENE MGC133554 MGC133554 similar to MAK31-like protein EMBV3_11390 CCTTTGAAGGAGAAGCCTGGAAGAATGTATCCCAAGAGGCTAAAGATTTGATCCAAGGAC Gene GeneID:504408|RPS6KA5:XM_002691117:47_cdna UTR3_Alt 2 NULL GeneID:504408 10 GENE RPS6KA5 MSK1 ribosomal protein S6 kinase, 90kDa, polypeptide 5 EMBV3_02025 AGCCACAGGTCAGTGGGGGCGAGAATGGAGCCCTCTTCTCAGAGTCCTCCAAAGATGGAA Gene GeneID:510521|TSGA10IP:NM_001098009:572_cdna Constitutive 0 NULL GeneID:510521 29 GENE TSGA10IP MGC151645 testis specific, 10 interacting protein EMBV3_02174 GCTGTTGTAAATATAAATGGTTTACAGTGTGCTTTAGGGCATATTTCTTAAAAATTCCAG Gene GeneID:782667|TP53INP1:XM_002692814:139_cdna Constitutive 1 NULL GeneID:782667 14 GENE TP53INP1 NULL tumor protein p53 inducible nuclear protein 1 EMBV3_33725 CCCAGCTCTGAGGAAGAAACCACCATTGGTAATTATGAGGCAGGACCCGAGGCCTTTAAT Gene GeneID:504775|KRTDAP:XM_002695018:266_cdna Constitutive 1 NULL GeneID:504775 18 GENE KRTDAP NULL keratinocyte differentiation-associated protein EMBV3_05441 AGAGTCAACACTTCATCTCCACTCTCTTAGGCAGCTGGTCAAAGCTGGGGTGCTCACTGT Gene GeneID:508320|STK19:NM_001097997:72_cdna UTR3_Alt 3 NULL GeneID:508320 23 GENE STK19 NULL serine/threonine kinase 19 EMBV3_03954 CACCTGCCTCTCAGAGTCCCAAGAAACCTCCAGCAAAGGACCCATTAGCGGATCTTAACA Gene GeneID:100337082|LOC100337082:XM_002690056:39_cdna UTR3_Alt 2 NULL GeneID:100337082 9 GENE LOC100337082 NULL synaptosomal-associated protein, 91kDa homolog-like EMBV3_13326 TGGAAGGTCATCTGAGCCTAGGAAGAAAGCGTACTATCTGTTTTCCCTCATCATGAATTT Variant GeneID:506527|PEX11B:NM_001075266:56_cdna 181^382 2 EMBV3_22579 GeneID:506527 3 GENE PEX11B MGC139582 peroxisomal biogenesis factor 11 beta EMBV3_20889 GAAGCAGAAGATATTAAGAAGAGGTGGCAAGAAAACACAGTGGAGGTCTTAGTCACCCGG Gene BVV0102_060078 + 0 NULL GK000024.2:13078223-13606870 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09715 AACAAATCTTCTTTCTGTATGTACCCCCTGAATTATCAATCTCTATTTAAAGCAGGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31712 GCCGCATTTGCCTTTTGTGAAGGCGGAACTCAAGGTGTATCCTCATAGGAAGGAGAGCGT Gene GeneID:787633|HES5:NM_001105467:254_cdna Constitutive 0 NULL GeneID:787633 16 GENE HES5 MGC165809 hairy and enhancer of split 5 (Drosophila) EMBV3_17375 TCGGCTCCAGCCGGGGCGGCGTGCGCGGCGTTCTGGGTCTTGGGAGCTCCAGTGGCTCTG Variant GeneID:506656|C1orf35:NM_001034272:14_cdna 92^406 2 EMBV3_09351 GeneID:506656 7 GENE C1orf35 MMTAG2 chromosome 1 open reading frame 35 EMBV3_43199 TGAAAAGGCTAGTGGACACTGTACTGGGGCTTTTGTTTGCCCACGTTTGCTGTGTGAGAG Gene GeneID:618961|LOC618961:XM_002690608:96_cdna Constitutive 0 NULL GeneID:618961 10 GENE LOC618961 NULL similar to T-cell receptor alpha chain EMBV3_01421 GCGCCTCTGCCCTGTGTCCTTGTCCTTTGTAACTCTGCGTACTTGCTCAAGCTATTTCCT Gene GeneID:282348|SCNN1A:NM_174598:5_cdna Constitutive 0 NULL GeneID:282348 5 GENE SCNN1A NULL sodium channel, nonvoltage-gated 1 alpha EMBV3_28468 GCCCCAGGAATGTTTTCCGCTCCGTCAGAGGGACTTGGTTACAGGACCAAGTTTCTTCTT Gene GeneID:506219|ABAT:NM_001081581:75_cdna Constitutive 2 NULL GeneID:506219 25 GENE ABAT GABA-AT GABA-T L-AIBAT MGC137464 4-aminobutyrate aminotransferase EMBV3_23563 TCCATCATGAAGAAATGCAAGGCTGCTAACCCTGAGATGCCCACCTCCTTCACACTGAGC Gene GeneID:767913|GDPD3:NM_001076990:419_cdna Constitutive 1 NULL GeneID:767913 25 GENE GDPD3 MGC127794 glycerophosphodiester phosphodiesterase domain containing 3 EMBV3_02412 AAGAGAAAAAATGAGGACATATCAGTATCGGGTTCTCGGTGCTCTTCTGATGCCAATATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24862 CAAGCACCTTCGACCAGCTTTCTATGACCTCACCTGGTTCCAGCACCACTCTTTGGATGT Gene GeneID:515638|MGC152010:NM_001075724:32_cdna Constitutive 0 NULL GeneID:515638 6 GENE MGC152010 NULL UDP glucuronosyltransferase 2 family EMBV3_22617 GTGAGAGGAAGCTCAAGGCAGTGTTCCTCACCAATAACTTCAGGAGAGGTCAGTTGAAGG Gene GeneID:511913|HSPD1:NM_001166608:97_cdna Constitutive 1 NULL GeneID:511913 2 GENE HSPD1 HSP60 heat shock 60kDa protein 1 (chaperonin) EMBV3_38953 GCAAGGTTCCCTCCAGCTTACTGCGCTCCAAGATCACCAAACCCAACGTGTACCATGAGT Gene GeneID:521761|ADARB1:XM_002685126:74_cdna Constitutive 0 NULL GeneID:521761 1 GENE ADARB1 NULL adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) EMBV3_27652 ACCGAGAAGATCGATGGCAATCTGCTCGTTCAGCTCACAGAAGAAATCCTCTCGGAGGAT Gene GeneID:507330|FAM59A:XM_002697684:187_cdna Constitutive 0 NULL GeneID:507330 24 GENE FAM59A NULL hypothetical protein LOC507330 EMBV3_03782 TGAAAGGCAGATGCTGGAGGACCTGAGAGAAAGTAATGGAATTGTACAGCTGGAGGAACG Gene GeneID:615588|RASSF9:XM_002687194:96_cdna Constitutive 0 NULL GeneID:615588 5 GENE RASSF9 PAMCI Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 EMBV3_04320 CCCAGCAGCTGCTGAAGACAGCTCTAAAAGGCAGAGAGCAAGCAAGCGGGCCAGAGTGTC Variant GeneID:613305|MIF4GD:NM_001034732:20_cdna 161^270 3 EMBV3_27532 GeneID:613305 19 GENE MIF4GD MGC128193 MIF4G domain containing EMBV3_17647 AGCCTGCCTCCATTCCCAGGTGCTGAAGCCATAGGCAAGCAGCAAGACTTAAATGTTGAT Gene GeneID:540057|PCDHA3:XM_002689245:131_cdna Constitutive 0 NULL GeneID:540057 7 GENE PCDHA3 PCDHA7 PCDHA9 protocadherin alpha 3 EMBV3_24934 GGACATGTCCTGCAGTCTTCCATTGTTAGGTGATCATCTGTTTGGTCACACTAGTGTAAT Gene GeneID:532695|PPHLN1:NM_001075972:24_cdna Constitutive 1 NULL GeneID:532695 5 GENE PPHLN1 MGC139752 periphilin 1 EMBV3_39155 GCTCGGGGCCTTGCAGACGCTGCTCAGCCGATTTTGGTGCCTCTGATTTTGCTACGACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36250 AACGCCACTCACAAAACCCAGGTGAGCTAGTGGGCATATTGTTTGTTAGAGATGGAAGGG Gene GeneID:514781|C7H5ORF15:NM_001035299:14_cdna UTR3_Alt 2 NULL GeneID:514781 7 GENE C7H5ORF15 MGC127320 chromosome 5 open reading frame 15 ortholog EMBV3_40667 AATCCCTAATGATCCTGTCTGGCTTGCCTGCCCCAGATTTTATTGATTACCCTGAGCGGC Gene GeneID:616821|LOC616821:XM_002699884:125_cdna Constitutive 0 NULL GeneID:616821 X GENE LOC616821 NULL similar to midline 2 protein EMBV3_38591 AGCGGTGCTTGTTCTTGGTCGTTTGACCCCATGCGCTAGACTGGATTGTAGACGCCAGGC Gene BVV0102_233656 + 1 EMBV3_09622 GK000019.2:22431567-22432981 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095731 TCONS_00095730 TCONS_00092694 TCONS_00095729 TCONS_00095728 TCONS_00092693 TCONS_00092689 TCONS_00095727 TCONS_00092691 TCONS_00092688 TCONS_00092696 TCONS_00092699 TCONS_00092692 TCONS_00092695 2 XLOC_057781 XLOC_056957 Coding TCONS_00092688 XLOC_056957 Coding Coding ABR 19:22347419-22433043 j TSS69689 6710 1 TCONS_00092688_7 822 22 0.921890146339185 0.00120193741039032 0.000819590532699052 0.00090291351876161 0.000346903050365917 0.000844945936449588 6.31198778460491e-05 0.000581088924988329 0.000202684815923285 0.000790743433523122 0.000197139826496482 2.94382172725687e-05 0.000182452173430895 1.59096071002312e-05 0.000246899709346905 5.68109567081622e-36 0.00260705442527787 0.000548002842679395 5.57408621581137e-08 0.000226985240506709 2.45461595507467e-15 9.95098605882236e-05 0.000874703370241148 0.000280991823270178 4.38372695502846e-05 0.000620697036538178 0.000517444568214264 0.000107416176967275 5.10569405618362e-05 1.25904674914577e-08 2.39618250541617e-12 XM_005220105.1 ABR PREDICTED: Bos taurus active BCR-related gene (ABR), transcript 0.0 9436 100.00 0.779582712369598 NM_001092.4 ABR Homo sapiens active BCR-related (ABR), transcript variant 2, mRNA. 0.0 4854 81.21 0.752906110283159 TCONS_00092688_7 sp|A6QNS3|ABR_BOVIN ABR_BOVIN Active breakpoint cluster region-related protein; 0.0 1609 98.49 0.963503649635037 4 coding 1 0 1 0 0.0299756486607904 0.849618692219714 -0.0185086664855859 0.738256552159725 AGGGCCGGGAGCCGGCGGCCCGAGAAGGTTCATAATGGACCCTTTCATCGGCAGCCGGTGGCCCGGCGCCAGGACGGACTCCGGGGAGGCCCGCGTGCTGGTGTAGGCCTGCCCCGCGCGCTCTTCCCGTCCCCGCCGGCCCGCCCCGCTCCCTCCCGGGCGCCGGCGGCCACGGCTGCTGCCGTTGCTGCCGCCGGGACCCCGCTTCCTGTTTGCCCTCCGCGGCTCCGGCTGCCATGGAAGAGGAAGAGGAGGCGATAGGCTTTTTGGACAAGGTCCTGGAGGATGAAGATGTGTTTCTGCTGGAGGAGTGCGAGCTGGGAACCCCGACCAGCCCCAGCTCAGGGTCCCCCTTCTTGGTGACTGTGAAGGTGGAAGCAGGGAAGGGCCTGGAGATGAGGAAGCTGGTTCTCTCGGGGTTCCTGGCCAGTGAAGAGATCTATATTAACCAGCTGGAAGCTCTGTTGCTGCCCATGAAACCTCTGAAGGCCACTGCCACCACCTCCCAGCCCGTACTCACCATCCAGCAGATCGAGACCATCTTCTACAAGATCCAGGACATTTACGAGATCCACAAGGAGTTCTATGACAACCTCTGCCCCAAGGTGCAACAGTGGGACAGCCAGGTCACTATGGGCCACCTCTTCCAAAAGCTGGCCAGCCAGCTTGGTGTGTACAAAGCATTTGTGGATAACTATAAAGTCGCTCTGGAGACAGCTGAGAAGTGCAGCCAGTCCAACAACCAGTTCCAGAAGATCTCCGAGGAACTCAAGGTGAAAGGTCCCAAGGACTCCAGGGACAGCCACACGTCAGTCACTATGGAAGCTCTGCTCTACAAGCCCATTGACCGAGTCACCAGGAGCACCCTGGTCCTACACGACCTGCTGAAGCACACACCTGTGGACCACCCAGACTACCCGCTGCTACAGGATGCCCTCCGCATCTCCCAGAACTTCCTGTCCAGCATCAACGAGGACATCGACCCCCGCCGGACTGCAGTCACAACCCCCAAGGGGGAGACGCGGCAACTGGTGAAGGACGGCTTCCTAGTGGAAGTGTCAGAGGGCTCCCGGAAACTGCGGCACGTCTTCCTCTTCACCGACGTCCTCCTGTGCGCCAAGCTAAAGAAGACATCAGCGGGGAAGCACCAGCAGTATGACTGCAAATGGTACATCCCCCTGGCTGACCTAGTGTTTCCATCCCCTGAGGAGTCTGAAGCCAGTCCCCAGGTGCACCCCTTCCCAGACCACGAGCTGGAGGACATGAAAATGAAGATCTCTGCCCTTAAGAGTGAGATCCAGAAGGAGAAAGCCAACAAAGGACAGAGCCGGGCCATCGAACGCCTGAAGAAGAAGATGTTTGAGAATGAGTTCTTACTGCTGCTCAATTCCCCCACAATCCCGTTTCGGATCCACAATCGGAATGGAAAGAGCTACCTGTTCCTACTGTCCTCAGACTATGAGAGGTCAGAGTGGAGAGAAGCGATTCAGAAACTGCAGAAGAAAGATCTTCAGGCCTTTGTCCTGAGCTCGGTGGAGCTCCAGGTGCTCACAGGATCCTGTTTCAAACTTAGGACTGTACACAACATTCCTGTCACCAGCAATAAAGACGACGACGAGTCTCCAGGGCTCTATGGCTTCCTCCATGTCATCGTCCATTCTGCCAAGGGGTTTAAGCAGTCAGCCAACCTGTACTGTACCCTGGAGGTGGATTCCTTTGGCTACTTTGTCAGCAAAGCCAAAACCAGGGTGTTCCGGGACACAACAGAGCCCAAGTGGGACGAGGAGTTCGAGATTGAGCTGGAGGGCTCTCAGTCCCTAAGGATCCTGTGCTATGAGAAGTGCTATGACAAGACCAAGGTCAACAAGGACAACAATGAGATCGTGGATAAGATCATGGGCAAAGGGCAGATTCAGCTGGATCCACAAACTGTAGAAACCAAGAACTGGCACACCGATGTGATTGAGATGAATGGGATCAAAGTGGAATTCTCCATGAAATTCACTAGCCGAGACATGAGCCTGAAGAGGACCCCCTCCAAAAAGCAGAGCGGCGTCTTCGGTGTGAAGATCAGCGTGGTGACCAAGCGGGAGCGCTCCAAGGTGCCCTACATCGTGCGGCAGTGTGTGGAGGAGGTGGAGAAGCGGGGCATCGAGGAAGTTGGCATCTACCGGATATCAGGGGTGGCCACAGACATCCAGGCGCTGAAGGCCGTCTTTGATGCCAATAACAAGGACATCCTGCTGATGCTGAGCGACATGGACATCAATGCCATTGCCGGCACCCTCAAGCTCTACTTCCGGGAGCTGCCCGAGCCCCTCCTCACAGACCGACTGTATCCCGCCTTCATGGAGGGCATCGCCCTGTCAGATCCTGCTGCCAAGGAGAACTGCATGATGCATCTGCTCCGCTCCCTGCCCGACCCCAACCTCATCACCTTCCTATTCCTGCTGGAACACTTGAAAAGGGTTGCTGAGAAGGAGCCCGTCAACAAAATGTCCCTTCACAACCTGGCTACCGTGTTTGGCCCCACGTTACTGAGACCCTCGGAAGTGGAGAGCAAAGCACACCTCACATCGGCTGCCGACATCTGGTCTCACGATGTCATGGCGCAGGTCCAGGTCCTCCTCTACTACCTGCAGCATCCTCCCATCTCCTTCGCAGAACTGAAGCGGAACACACTGTACTTCTCCACTGACGTGTAGCCCGAGGTGGGAGCGGCTGTGGGAGGGCAGCTCCGAGCCAGCCTCTCCAGCCAGGGACCCAACCCAGACTTGAAGGACTGCAATAGAGAACTCCCAAACCCAGCGCTCCACACTCCAAGGGACACAGATTTCCAAGAACTGGAAGACGTGTATCTTTTGTGCCACCTTGTACAAAGCCAGCCGACCCGGCCCCGGCCCCGCCACGCACCCCGGCTCTGCCCTCCGTTCCTCTAGTCGTGTCTAATGCTCCGTGCTGTTCGGGAATTGTTTTATGTCTATTTGTCATGCAGAAAAGGTAGTGGCCGACCCGGTGTGGGCACACAGGCAGCCTGCTTTGTTCTTTGATTTCCTCCAACACTTTCTTTCCTCCTGAGTCCGGTCCAAAGGCTTTTATTTTGCGCTCTGTAACTGCTGCCAGCTTCGCCTCTCTTGGCCCTGCTCCCAGATCGCAGTCTCCTGGCGGCCTCCCCTCGGTCTTCCTCTGCCCCATCCTTCCCCCCCCGCCCCCCCCAAGCCTGCCTGCATGCATTTGCAGCTTTGGTTTTTGACCCATCACCTCGAAAGTTCTGAGGCGGCCCTGGGCAGCGGTGGCGGGGGGCGGCCGGTCCGATGCTGCCGCCCCCCACCTGTGGAGGCGCGCCTGTCCGCCTTGCTGCCTGTGCAAATGTTGGACAAGGAGACAGACTTGCACTGATCCTCGGCTCAGCACAGGCTGGAGAGCAGATTGCTGGGATTTTTTCCACCTGAGAACCTCCGTTTCTGGGGTGTGTCTGTTCTGTCTCCAATCCCCGTGAGGCGCCTTTGACTGTTTCTTCTTCTGCTTTTCAGTTTTTCTCCTGCTGTTCTATTTTGAGTGTAGAGACTCACCAGAGACCTGCTGTCAAGGCAGCTAGAGGGTCAGGAAAGAATCGGGGGAGGTGGGAGAGTCAGGTTGCCAAGGAGACAGAGCAAGTGGGCTGTTGAGAGGAGTGCCAGGGAGTGCTGGGCATCCTGGGCTGGGAGCAAGGAGTTGTCATGGCGGCTTTTCTGGTGGAGCCAGGCTTCTGGGAGGGCAACCACGAGGGCTGAAGCAGACGTCTCGAAACAGGCAGGCTCCGTCCGAGAGGGCTAGCCCTTCCTGGTGCCTCCCATACCTCGTGGTACCTTTGCCTTAGACGTTACACACTCCACAGCCAAGCACTGCCATGGGGCAGCCCCCACGGCCACGTGCGCCCCAGGGCCTGGGAAAGTCAGGCGCGGTCCAGCAGTAGCCAGCCGTCATGGTGCTGCCTCCTGCCCCTGGCTTCTGAACGCAGCCTGGTGGGTGAACTCGGGGGAACTCTAGGAGTTGGGGTGTGCCAGGTACCTGCCTGTCTCGGGACTGGGTTTTGCAGGGGACCCTGGTGGTGGATGCTCGACTCATCCGCAGGGTCCTATCCCCATGTTGAGGGCCGCTGCTCAGTACTGGAAAGGAGAGAGAAGCGCCTGCAATGTGCAGTTTCTTCTCTCCTGAGCAGCGCTGCCAGCCTCCAGCAGTTCACCTGGGAGGAGACAGCCCTGGCAGCAGGGGCTGGAGCTACAGGACAGGGCTCCCTGGCTCTCCTGAGACTAGATTCCAAGCCCTGGGGGTTGGGGAGAAGAGCTCCCCATAGCTTGAGCTCAGGGCGGTTTTAAAGAAGGGTTTGGGGCCCTGAAGCCTTAGTACCGGCTCAGTGAAAGGAAGGCCCCGTTCTTGTCTCGTTTACACCTGTGGCCCCGGCGTGGGCAGAACGGTACACATTCTGTGAACATCGGAGGATAGATGCCCAAGAGGAGAGAGGTACTGACGCCCTGGCTGCCTGCTAAGCAGCTGAGCGAGGAGCCCCACTCCCTAAGATGAAGGGCTTGAGCCACAGGTGGAGAAAGAATGCTGCAGTCTGAACATCCCCCATGTCTGACCATCCCTGGAGCCTGCTCGACACTCGGGAGCCGGCAGGTGGCCTGGAAGGTTCTTGCTTCCACGGCTACTAACTGGAATGAATTGGAGCCCCACCTAGAGCTATTTACAGCCCCTAACAGGTGCCTCCCACCTTCAGCGTCAGGTAGCTACTGCAGCCCCCCAACCTCTTAGGTGATGAGAATGGGAGGAAGGCTGGAAGGGCTGAGAAATGGGAAAGGCTCAGCATATTTATCAACGACCCCCAGAACCAGGAGGGGTGGGTACCAGACCTGGACTAAGCTGCGCTGAGGAACAGCCCATGGGTTCTCCTGAGCGACAGGGACTGTACAGAATCCCAGCCATTGTGCCCAGCAGGGCAGGCTGTGCCGACAGGAGCCCACAGACAGGCTACAAGAATCCACACACCTGTCCTTGCTGGCGATGGCTGCGGGCTGCCGGTGTTGTGCTGTTACAGGTATGATGGGACCCTTCATTAATATTTGACTTTCATAAGTTGGTAAGGATATATTTTTCTTTGGTCTATGTTCTGTTTCAACTTATGTAGATTATTATAAATTGATGTAAGCCACGTGAGAGGAAAATGTTAATAAAAAAAAAAAAAACCTGCAAAGCCCTGATATTTGCACACAACTCAGCCCTGCGGTGTGGACGTTTGTGTTCCCGGGAGTCCAGGGAAGATCACCAATCTAAATATTTAACTCTTCCAGCTGCATCCAGATGTGAGTTTCCAAGAATCTCCTTACTAGTGAATTCCCCCTGGTGCGTCCCTTCGGCCTGTGGGGACCATGGCAGTTTGGGAGATGAGCCCACGCCCTCGCCTTGCTCTTTCACAAATGCCCGCAGCTGTCACCAGCCAGTTCTTTTCATGAAAATACAAATGCCCCACCAGAGACCTGGCCATCAATATGCCTCAGAGATGGCAGGAAGTTGTCTATTCAAGTGGAGTTTATTTTATGCAAACATCTCTACAATTTCCTTGGAAATTGCAGGTCTTTGGGGCAGCCTGCTGGCCTAATCTCTGTTGGGGAGGCTGGATCCTCTAGAGGTCCCAGCCTCCCTCAGGAGAGCTAGCGGGGTTAATGTCGGCTCCCACCAGCCTCAGCCATTGGACACTGTGTTTATTCTGGAGATTGGGAACAGATGTCTCTGAAAATTGGTGTTTGGTTTATGAGCTCATACTGCCTCCTTAGCCATCTAAAACAGGAAACTATTCATCTCCTCTCCTGACTGAATAGTCAGAGTGGACAATGCTTGGCTTATTGAACTGACGGCTACTGACAGCCCAGGACTCGTCATTCCCAAGGCAGCCTCGAGGGCAGCGGTGCTTGTTCTTGGTCGTTTGACCCCATGCGCTAGACTGGATTGTAGACGCCAGGCTTCTGGCACTGCTGACAGGTGGCAGGTAAGAGTGTCTGCGCTTGCTCTAACTGCTTACAGGTGCCTTGTTTAGGGACAGTGGAGGACCCACTCCAACATTTGTTCTCAGACCTGTGAGGATTCTCCAGGCAGCCTAGCAGCAGTGAAGCCTCTTGACCGAGACTGGGACAGGCATTCTATAGAACTACTCCACCTCCTCCCCCTGAGAAGGGCACGAGCCTTGTGCACTAGCTCATGCTCATTCCAAAGGCAACAGCAGACAAGGCCAGAGGAAGGTGTTACCAGCTGGGCTTGACATCATCACTCATGTACACACACACACACACACACACACTCAGGATGTCTAGATGGTTCAGCTGAGTCTGAGTTCTGGTTAAGGTTTAGAAGACAGCCCACAGTGGGGGAGACAGCCAAAAAAGGCACAGGAATGACTCTATGGGATAAAGGAGACAAGACCACTGGCTGCAGGCGGCTGGAATTACAGGCCCCCACCGTGCTCCCTGCTGGTCTTAAGTTCATCTTCACCCCACCACCAAGGCACCAGAGCAACGCAGCATCTGCAGCAGGTCCCGATTGTAAAAGGGCGTTTTTTTTGTGTATAGCACACAATTAGGCTGAGCTGCTACTGTCAGAGAAAGGCTACCAGGTCAAGTCAAAAACACCAATGTTTAAGTAAGGAACAAACCCCTGACATCAGAGGAACAGGGTGC EMBV3_17580 AGTTCTGATGCTGCTGACCACCCCCTCTCCTAGTACCTGTGGCTCCCATAAAGGTGTGTT Gene BVT0102_128034 + 0 NULL GK000016.2:44559716-44573571 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31541 GCCAGACATGTAGGTGAGACTATTCCATGGCGGCCTGTGATTTCATCTTAGGACAGGAAG Gene BVV0102_040993 + 0 NULL GK000024.2:42368661-42578579 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139054 TCONS_00139053 TCONS_00139052 1 XLOC_084796 Coding TCONS_00139053 XLOC_084796 Coding Coding VAPA 24:42332529-42371150 j TSS104078 4336 1 TCONS_00139053_2 294 7 0.887907819782496 0.000768643615290422 0.000645934896619667 0.00100018979821299 0.000551496091212704 0.000839589628404494 0.000201301465568395 0.000386091326088925 0.000497137609465695 0.000504842607905085 9.96399890644987e-05 1.453519898392e-05 4.25089190320799e-05 1.14381813519203e-05 0.000103553272991872 0.00011122417274696 0.00128902733350895 8.62542832299259e-05 0.000502912912198037 0.00134395646854159 0.00150038609978474 0.000185949772022558 0.000405352965784112 0.000254449850954799 0.000194720824593787 0.00103554434654201 0.00102104297359679 0.000407223233603799 5.07151406038996e-05 2.49738632690858e-09 1.11179610900931e-08 XM_005224173.1 VAPA PREDICTED: Bos taurus VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (VAPA), transcript variant X1, 0.0 7705 100.00 0.985009225092251 NM_003574.5 VAPA Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (VAPA), transcript variant 1, mRNA. 0.0 2273 78.47 0.63630073800738 TCONS_00139053_2 sp|Q0VCY1|VAPA_BOVIN VAPA_BOVIN Vesicle-associated membrane protein-associated protein A; 7e-167 468 81.97 0.996598639455782 1 coding 0 1 1 1 0.0216461066379602 0.838181678846939 -0.00637995212797432 0.911837241811979 CGCAGGCGCAGCAGCCGGTCGCGCCTGACGGCGTGGAGGGCGGGCCGGGCGCGAGGCCTCGCGGCCGCCGGGGCGCGCACGTAGGCACGCAGAAGCGTCACGTGGTTTTTTTTAGGATCGCAGTGCGCGTGGCCGCGGCGGCTGGTGTGGGGTTGAGTCAGTTGTGAGACCCGGAGCTGCGGACCGGCGAGCGGCCCAGCGAGTCGCCGACAGAGCGGCGGGTGTCGGGTTCGGGAGCCGAGCGCTGGCCCTGCGTCGAGCCGGGCCGACCCGCGCCGTCGCCGCCCCCCGCCCGCAGCTAGCGACCCGCCGCGGGCGCGCCCCCGCTCTGCGCTGTCTTCGATGGCGTCCGCCTCCGGGACCATGGCGAAGCACGAGCAGATCCTAGTCCTCGACCCGCCCACAGACCTCAAATTCAAAGGCCCCTTCACAGATGTAGTCACTACAAACCTTAAGTTGCGAAATCCTTCAGATCGAAAAGTGTGTTTCAAAGTGAAGACGACAGCGCCTCGTCGGTACTGTGTGCGGCCCAACAGTGGGATCATTGACCCCGGCTTGACTGTGACCGTTTCAGTAATGCTGCAGCCTTTTGACTATGACCCCAATGAGAAGAGTAAACACAAGTTCATGGTACAGACCATCTTTGCTCCACCAAACATTTCAGACATGGAAGCTGTGTGGAAAGAAGCGAAACCCGATGAATTAATGGATTCTAAATTGAGATGTGTATTTGAAATGCCCAATGAAAATGATAAATTGGGTCTCGCTCCTCCAGGGCCCGCCGTGGCCGTCGCTCCGCTGAGCAGCATCAACAGCACAGGCACAGCACCTACCACTTATAGTGCGAAGAATGAGCCCAGGGCCTTCAGTGTGTTCAAACAGGAGAAGCAGAAGAACGACATGGAACCCAGCAAAGCCGTTCCCCTGAACGCTGCGAAGCAGGACGGGCCCGTGCCAAAGCCGCACAGCGTTTCCCTCAGTGACACCGAGACGAGGAAGCTCGTGGAGGAGTGCAAGCGGCTGCAGGGGGAGATGATGAAGCTGTCGGAAGAGAACCGGCTCCTGAGGGATGAAGGCTTACGGCTCAGGAAGGTAGCACATTCGGAAAAACCTGGATCCACCTCAGCTGTGTCCTTCAGAGAGAACGTCACCAGTCCTCTTCCTTCACTTCTTGTTGTCATTGCAGCCATTTTCATTGGATTCTTTCTAGGGAAATTCATCTTGTAGAGTGAAGCATGCAGAGTGCTCTTTCTTTTTTTCCTCTTGACCAGAAAAGATTCGTTTACCTGCCATCTCACTGGTAGTGTGGCCCACGGTGACCATGTGGCCCACGGTGACCATGCTTTGTGTGTACAGCGTCATGTAGGCCTCGCCCGTAACGGTCTCACGGTTAGAAAGAAACGCGTAAGAGCAGAGTGCTGGGCTCCGGACAGCGCCACCGCCACCAGACCGTCCCTAGCAGGCGTCATTGCACATTCAGTCCTTTATGAAATTCATAAATAAAGAATTGTTCTTTCTTTGTGGTTTTAATAAGAGTTCAAGAATTGTTCAGAGTCTTGTAAATGTTATTTTAATAATCCCTTTAAATTTTATCTGTTGCTGTTACCTCTTGAAATATGATTTATTTAGATTGCTAATCCCACTCATTCAGGAAATGCCAAGAGGTATTCTGTGGGGAAATGGTGCCTCGTACAGTGTAAATTTTCTCCTTCACCTTTGCTAATATCATGGCAGAATTTTTCTTATCCCTTGTGAGGCAGTTGTTGACTGAGTTTTTCATCCTTCCAATCCTGTCCCATGGTATTTAACACAAAAATAATAAAACTGTTAACAGATTCTTGCTCGATAGCTTGTGTCTGTTGTGTCCTGAGGCGGGTGTCAGGGAGCGCGCTGTGTGGCGATCTGGGTTATGAAACGCATGACTTATCTCACGGAAACCCTTGCAGGTGTCATGGTGTTTGTGGTTCAAAGGCCTCGTTCCTTTAAGGAAAGGAATTGGTAAGATTTCAGGACACTTTTGGTATTTTAGAAGGTCATAATCCGTTTGTCTTCAAGATAATACAAAATAAGCAAATATCGTGAGAATTAAAAAAAAGTGCTGTGATGTCAGTCAGTTTACGTGTCTGCCCTGTGGTGCGATTCTGTTTAATTTACCCTGTTCTCAGGTTCTTTGAGTGTCTATCTTCTCGAGAAAGACTAATTTTCCTTGGTTCTAATCACTGCTTTTTGACCAGCCTAGTGATTTTGTAGCATCTCGGAATAACACTTAAATGTACCCCCTCAGTTCGCCCCCACCCCGGTCCAATTTGACATGTGAGGTAACTTCCATTATGGAATTTTGGTATTACTGAGTAAGCCTGGGGAATTCCTTTGTGAAAAATGACCTTCTTTGCAAGTCTCTGTGTCAGCCACGTGAAGTGGGTTTTCGGTGTAACTGCGTGGCGGGGTCTGGTGTACTTCCCTGCACTTAAGTCTTATGTCTCACTTAGTTACTTCTGTGTTGGCATAGAAAATCTTGAAACTAGAAAAAATAGATTCACTTTTTGTACTAAGTACAATCTAATCCAAGCAAATTTTGATTTTTGAAAATAGGTGTTGGTTTTGTAAAAGAAGCACTCATATCTGAAAGGGAAGTTGGACTTGGGGACCTGGCGTGCAGTGAAGGGTGTTGGCCCCACATCTGTGTGTGCATTTTATGAAGGAGAGAAACAGTCTGAAGTATTTGGTTGCATTTGCATTTCAGATGTGTTTTGGGCTTGTCAGATCCATGTGCTGTGTGGTGTCTTCTAGAAAACCCCTGGCCTGTGTGCACAAGTTACAAGAACATACGCATGTCTCTGGAGCCACCCGCCTGCGTGGAGCCCAGGGTGGATGCTCCTTCTACTTGGAACCTGGAAACACACGCTGGCAGCAGCCTTGCCATCCCACCCCGTCAGTGCAGAAGAAGGTGCTCCCTGGCCTGAATCTCTCCCTGATGAGCATCAGGCCGGTTGTTTTAGAGCTGTCAGTTTTCAAGCTAAATTTAGCAGAATCCCATTTGATGGGAATCCTGTGTAGTTAGGGTTCAGTTTGTTCAGCTCCTGTGTTTTCTGGTTGAGGGCTCTGAGGCCTTTTGGGGAGCTGACAACTTCGCTCATGTCTCATGGGAGGTGGAGGCAGGGCCGGACCAGGAAGCCTGCTCTCCGGACTCCAGCTTCCTGTCTGTTTCTGATAACTTTGACATGACAGGAATAGTGGACATTAATATGCTGTTTAATAACAGTGTGAAACTTCCTGTCCTAAGATGAAATCACAGGCCGCCATGGAATAGTCTCACCTACATGTCTGGCTTTAATGTTTAGGCTAGGATTACCCCCTCCCAACTGGTAAGAAGTAAATGCATTTTCCGGTAGGCATTTCACAGACTGCGTGACGCAGTGGTTGGTCTTAGCTGGGAACCGTGTACAACATAAAAAGTCCACGTGGGCTGCTCCTCTGCTTTACATTCCAGGAAGCGCTCTGACTGTATGGGAGGCGCCTTATTTCCATATGAAGTGTGATTTGGCCGCTTTATGACAGTTACTTGAGAAGAGTCCCAACTGTATTAATTGACTGGTAATATAGAGGTTAAATTATCTTTAACACTTACATGTTTAGAAATCTTTGCTTTGCCTGCCTGCTTACTTGGAATGTAAGCATGAGGGGAACGCGCTGTTGACGTCACTGAAGCCACAGCCAGGTATCTAAGGCCTTAACGTTCTTATGTGATGCTAAGTGCACCGCCTTCCTATGTTCTTCCTGTAACTAATGTACGTAATTTTGCCCATTCTTGTATTTACAAGAGACAGATTTAAGAGTTATATTCTGAGTGTGTCGTATGTCACCTTAAATGACATTTGGAAAAAAGTATGTATCAAAGTCAGAAATTCTCATCAGGGAAAAGTAATATTCTTAATTTTTCTTTCTATTATCTTAGCTCAGAAGTTCCCCTAAAACGGATGTTGTCTGCCATGGGATTTAGTTCTGGATTGTAATCATCCGAAATATACCACTTTGAAAACAAGTTTTACCCATAAGGTAAAAAATACAGTTCCTTACAGGGTTTATCCCTGAATTGTAATCTTCTGCCACTTTAAAAACATTCAAGCACTAGTTTTCCCAGAGCTTTGCACATTGCTTTCGGTGATTCTGGTATGTGCATAAATTTTAAAACATTGACCTTTATGAGAATTAGGGGACGATCAAGGTTTTACCATGTGGAAAAACAACAAAACAAGGTAAATAAGTGATCTTCATATGCTAGCTTTCAAAGGGAGATAAACTATTGTGTGAATAAATAAACTGTTCAAAAACGTGG EMBV3_19610 CCTTGGCCCGTTTGCTGTATATGAAGGAGAAACCTCTCACTTATGAGCATGGTGTGAAGC Gene GeneID:540619|RHOJ:NM_001083498:199_cdna UTR3_Alt 2 NULL GeneID:540619 10 GENE RHOJ MGC143367 ras homolog gene family, member J EMBV3_04640 GTGTTCAGCTCTTCACAGGGAGTAGAACAAGTGGTACTAGGGTTATACATCGTAAGAGGC Gene GeneID:613630|NAA38:NM_001034740:61_cdna Constitutive 0 NULL GeneID:613630 4 GENE NAA38 LSM8 MGC127377 N(alpha)-acetyltransferase 38, NatC auxiliary subunit EMBV3_06633 AGGCTCCTCTGTTCGTGGGCATCTTGCTGGTGCTAACAGCTTTGTTGCTTGCATCTCTGA Gene GeneID:281487|SILV:NM_001080215:899_cdna Constitutive 0 NULL GeneID:281487 5 GENE SILV PMEL17 RPE1 silver homolog (mouse) EMBV3_22549 GGCCACCCTTTGAGTCTGTGTCCTGAGAAGGCAATTCTTTTCCCAAATGGAAGTCACATA Gene BVT0101_022827 - 0 NULL GK000005.2:112172827-112192429 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196495 1 XLOC_118354 NonCoding TCONS_00196495 XLOC_118354 NonCoding NonCoding - 5:112176315-112186224 - TSS146208 9909 5 TCONS_00196495_11 110 1 0 0.0035494465596956 0.00201445621459801 0.00315890455116494 0.00178318350298442 0.00213007283282558 0.00111737905345638 0.00161872465760393 0.00221588055933958 0.00220355115455875 0.000590733239512709 0.00020705829694301 6.23989467275177e-05 0.000601868404335456 0.00126397165458865 0.000803458431058812 0.00139033825878454 0.000660137209063875 0.000184845553336038 0.00243733239560074 0.00438533442961261 0.00169570291946884 0.000539645974700117 0.000424075132598701 0.000829166190528056 0.00644339110919537 0.00408586170268257 0.00319634665653031 0.000270445676724158 0.000176409233859132 0.000222675569662858 XM_005261393.1 TNRC6B PREDICTED: Homo sapiens trinucleotide repeat containing 6B (TNRC6B), transcript variant X1, mRNA. 0.0 3763 77.94 0.470279543849026 0 noncoding 0 0 0 0 0.096700438179818 0.785655735234515 -0.0810392004049385 0.351612789047974 TAAATGCTTAGCAGCCAAACACATTTATTAGTCTTTTTTCTTTTTTTTTTTTTCCAGGAACCCAAAAATATTTTGTAGTTATAATGTAAGCAACTGAGTTGCACATAATACAATCATATCTTTCCAAAATAAAATAAAATAAAAAACTAAACAAAAACAAAAATAAGCTGTTTAAAAGCCCAAAAAAAAAAACCCTTCAGAAAACTCTTATATATGCATTACATCATCTCTCAGTTTTAATGAAATGACGACGACTTAATTCCTTATTACTCAACCTGTCACAATCCAATAAAAGACCACCCTTTAGTTTTTTTTGTTTTTGACTTTTTTTTTTTTTGAAATCCAGCATGAGAAATACAGTACCTGCTATGGCAAAAAATACACATAAAATGCAACTTTTCAGCTTATTTGTACATTAGTAGAGTTTAACATTTTATTGTTTGTTTTTTAAGTGAACCAGTGATTTTAAGTACCACTATACTAAAAAAGTAAAATAAAATATAGAAAAGGGGGGCCCAGCCTGCCATGCAAGTGCACCTCTAAAGTGCCTAGTTTCTGTGTCCATGTAAAACCAGTCATATGAGGAGCAATTTCAACAGATGGGAGTCTGATTAAACCTCTATATTTAAGGGAAAAAAAAAAAAGACAATGCCATATCCTCCCTTTTCTCCCCTCAAACTTGCTTAAATCCCATCATCCACTTTCTCTATCGCCCACCAGAAGAGAGAAAAGAAAGCCATCAAAATAATATTGTAAAAGCTATTTCAAGTATAAGAAAAAAACAAAACACTTCTAGGTAACTTGCAGAGAGCATCAAAATTGTGCAGCCATTTAGTCACGTTTACAGGTTTTGTTTCTGTGGACAGTGTTTCAGATGAGAGGGTTTTTGCTGTACCTTCCTGTTACCTGTTTGTGTGCAAAGTTGGAAAGCTGCCTTTTAAAGATCCAGCCTCTTTCTGATGCCCTTCTCTGCACCATCTGTGAAAGGGGGCAAGGAGAGAAGCGGGGGAGGAGGGGGCACTGAGGGGCAGCACCACCCGAGTCACCAGGTGGTGCTTTCCCACCTCTCCTCTGCCCCCACCCCAGCCCTCCCTTCTCTGGTTCACCATCAGTGACCTCTCACTGCAGAGATTCCCATTCTTCAGCTTCCTGATTTGGTAGGATGTATTTTACTATGTAAACATAGCCCCCTAGGATTATGGAACCCAAAAGCAGCATGTATCTCTCCATCCACATGGAGAAAGATAAAATAGTCCAGAAACCTCTCCTCAGGTTGCTTCTCTTTGTCTGGTTTTAGTTACTCGAAACAGGGAGGGGGTGGGGTGGGCACGGAGTAAGTTGTAAGCAAATGATGGGAGACTTAGGAGTGGGCACAGTTGAGCTGTTTCTTTTTTTTTTCCTCCCAGAAAGGTTTGTTTTTTTTTTTTTTAAACCTGTTAAAAATGTTCCTGCACCTAAAGTCATACTAAGGTTAAGGCCAAGGGTGCAGAATCTTGTGCACGTGTCTCTGTGAGCACATTCACGGTGCATGCACCATTTTTGATGTCTTCTGTGAGATCACTGGACACACTTTGGTCACTGTTGTGTGTGCAAAGGGTGGTGGGGGATGTGTCCCAGGATAGAAGTGCAGAGATCAGCAGAGCCCTTCGGGAGCGCCCCCTAGGGACATAAGGGCAGGAAAACCTCAGGAGGGACCAGAAGAGGAAACAGAAAAGGGGCCATCACACAGAGAAATAAAATCCGCAAGTTGACAGCGCCCAAATCAGAAGGTGGGTGGTGAATATGTGTGCATTTATTATCAAGTTTCTTCCCCTCAAAGGAAGTCGTCACTAGACAAAGATCAGGGAGCCCAACCTACAACGGGCTTCTTGACAGATACAGGGTTTATGTTTAAGATGGGGGAAGCTAGGGAGGCTGTGAAGAAGCTATCTCTAACGATCTATTCTGATCCTGCCTCGTGAGCGGCCAAATCTAGAAGCGCAATAGCTGACAGATCCTTAAAAGCAGCCCTTGTTTAAACTTGTTTCCCTCCACCTAATATCAGCTTCAAGCCTTGTGGAGAGAGAACAATCTGAGGGTGCGAGCGCCTTTCAGGAAGGCTGTCCGCATGTCTCAGAGGAGTTTCTTTCCAAATAAGAAATCAACTAATTTCCAGAGCATCACAGTGACAAGGCTATGAATTCTACAGCACAAAATTGAAATGCCAGGGACTGATTCTCTTTATGATCTACAGTTACTCAAAGTGTGTATGTGTGTGTTTGAACCAAGGAAGGTTGAGAGCTCAAGGTCTCAGGGAGAAAATGTTCTGGAGTCCCTGGAGGTGACAGATCTTCCAGAAGAGAGCAATCCAGACACTCCCCACCCTGGACCCAGAGCTGAAATAGATGGCCTCTATTTCAAACAGGGTTTAAACACTGGTCTGCCGTCATTGTGTGTGGAAGGTGATAGAGAGACCACCACCCCACAAACGCCAAGTCCACTCCCCTGACCTGTTCTGCTCTTCTTAAACGTGAAAGAAAAAGAGCTGAAACTTCCTATGGCTTAAAAAAAAAATGTGGAAAATATCATATTTTAGGGTTACTTTCACAGCAAAGAAAACATTGCAAAAGTTATCCTCCTATTTACACGTTCATATTTTTCCAAGGATAACCCATTGGTGGCCAGAAAAGAAGGGGAGTTAAAAGGTCTACGCTGCAGGGGAAGTGGACCTGGAGGTATTGTTTTGTGTTAGCTGAAACATCAGAATTCTGCTTTTTGTGTGTGTTTGTTTTTTTGTCTAAAGGCAATCTAATAGATTGGAACCCTGATAAGACCGTGCCTGTGCAGGCTCGCAGGGGCACGAGGAGACTGATCAAGTCTGTTACTTGTTACAGTACTGTGAATGTTGACAGCAAAAGCGCTGCATGGAAACACTGTTGCTTGCTTTATTAGGACACTGTGTGTTGCCAAAAATGCCTACACCAGAGCAATGCAGAGGCCACGACTCACTGCAGGCAAGATCGATGGAGGGATGCTGTCAGGACCAAAAGGAGGCTGCAGGCTTTCAAACACCTCCCTGCTCACTAGCTACACACAGTGTAACAACTGCAAGGGCGGCAGAAATGTCAATATGGCGGAGCAGGAGGGGTGGGAAAGAGAAGCCCCGTTGGCCTGTCAAGCAACCGTCCTCTTCTCCAGAGAGTTGCCTTACAATTAAATTCACTTAAAAACATCAAAGAAGAAAAATTAAAACGGAGCGAGGAGGAGGAGGTTTCTGAAATTGACATAAAGATTAAGGTCAGCACAAGTGAGGCATGGTTTCCTGAGCTTGCAAGGGTTCTGAATTCAGCAAAGGGTGAGAACTTTTTTCCAGAGAAAAGAGCAGTGGGGCAGGGTGGGGGGGCCTTCAGGGGCCTCATGCTGCACCAGGCTAACTAACACTGCACAGCTAGGATGGAGATCCTGGACCACAACGGTTGGTAGGAATGGCGCCCCCCAACTCCCAACCCCAGGAAGTGCCGGGCCGAGGCTCACAGGGCCCTGTATACCTCACTGTGCGGACCTTACGGCTTGGCTTCTCGCTCTCACTCCCCTTCCCTGCCAGCATGGGGGGCACACCATGGACACAGAAACCGTAGAACAAGGATGCAAAGCTACTTCCGTCCCCTTTCTGCCCTCTCCCCCACCCTCCCTTTGCAGAATGCATAGTTACAATTCACGTTACAAAATAAGCAATGATGACCACATATCGGACCCCCTTCTTTTTTTTGAAAAGAAAAAAAAAATCCAACAACCTCTTCTTAAATTCAGTATCAAAATTCACATTTGCATAATAATACATTTCAAGGCCATGAGAGAGGACGGAGCTAGCACAGAAGCATCGCCCCAGGTCTTCCTGAATGAAGCTGGAGGAATCTTGCGAGGGATTGCTTTCCCCTTTGGGGAGTTCTGAGGAATTATGGAAATGGCCCTTAGCATTCACTTGATATCTCTTTAGGAGGGAGTGGGGAGAAGAGGCGGAATCGTTTAAAACAAACGTGAAACAAAGGAGGAGACACTGCGGATTTCTAATGTTGAACTACAATGGTTCTGAAGAAATAAAACATGGTTTCTGATTTTTCGCTTTTCTTTCTCAAACATGTCCAACTCATCCTTTCAAAAGCCTTTTCCTTGTGTGTAATATACCCTGTTCGCACAAACAGCAACATTATGTGACTTCCATTTGGGAAAAGAATTGCCTTCTCAGGACACAGACTCAAAGGGTGGCCACGCACTGCCTGCTCTGTGCGCGGCAGGAGCAAGAAAATGCCTGCTCGACGTGCACAGATGTGTCACAAATCCGTGTTACCAGATTTCAATTCTCCAGTGCTTACAGAAAAACAAAAACTAAGACAGCCACAGCCACGCACGCACATATACACGGAGAAGACTAGGCAATGCTGAGAGACGTTCAACTTGCACTCCTGGACTAAGCCAGTGTCTGTCATCTGTGCACCATCACCTCCTCGTTCCCTGTCCCAAGTCCCCGAACTTCTTCCCCGTGACTGCAGTATGCAACACTGAGGCAACTGAAAACCCACGGCTGCCATGGCAGCGGCCCAGAGAAATGCTGACTTTCCTACAGACTAAGGGGACCGTCTGTTTTATCCCAATGGGTAGGTTCTTCCTAAAACAGACGGTCTCTGAACTCACAAAGGCACATTCAGAAATACTACACTTAGGAAATTAACTCCTTGGGCAAAATTTTAAAAGGAGGTGGTGTTTTAAACACATTATCTTTTAACTCAGCCCAAGATTTCTGGTGAGACGTGCCATAGCTGAATGCATCACTTGGTGAAAACTCTGCTACCTTTAAAAGGTATGTGATTTCTTTAAGGGTTCCAAAGGTTTTTTTGCTGTTTTATATAAATACCCTACCCTCCTTTTGCCTTTTTGGTGGACACACACAAGATACATTGTCTTCCTCTCCTTAAAGCTCAGCTGTCAAGCTGGTCCTGCAGCGAGGTGGCGGCTTGCCTCCCATCACCTCCCACGAGCCAGCTGCCGCCGCCCACACCCAGGACTGTGCATGCCTTTAGGGAGCCCAAGGAGAAGGCCCTCCAGATGCAGTAAGAGGTCCAGGGAAGTGGGGGGCTGAAAGGGAAGGCAGGCACTCGGCTCCACAATCACACTAGAAGCCGCTCCACAGTTACTCTTTAGCTGCTCACCAGCAGCAGTGAAGGAATTCTACTTTTGGGGGCGGGGGGGGGGGGGGGGGGGACGACGACACAATCCCAGCTTGTTAATATTGGCTCAAAAGGGATCAATTCCAATTGGGAATTTACTTTCCAAGCAATGATTTATAGTTTGAAAATGAAAGGGAGACACAAAGTACTTTAGGGAAACACTTTTTCTTTTCAATTTAAAACAGAACACTTGCCTCTTTCTGACCTTTCTCCTTCTGTGAACAAGTCAAGCATTTGTCACAAAGAAGAAACAACAGCTGAATTCTGTACAGACTTTTTGCTCAGGGCAGTACCATTTTTCCTGGCGTGCAGAGTTGTTAAATTCAGATGCCCAGCTAGCTGAAGAGGAAACTATTTAAACTCTGTGAGGCAAACACTGGCAATTTCTATCGCTTTTGCTATTTTGGTGGTGGCTGGAGGTTATTACAAGAGATTGCCAGTTTAAAAACCACTCAAAGGATCAAATACTTGGGAATTACTCCAGATCTAGACCAAGTGACCGTATATATGAGAATGGCATGGAGACCCAGTTGGTGGGGAGTAGGGCTGTTTCCTGACCGGTGTTCGCTTTACCATCCTGTGGGTGTCCAAGGCCTCTTCTTCTGCTGGAGCGAGCAGGGTCATTTCACTGTTCTATTTTAATTATGTTATTACTATGTTCAGAGATTCGTGAAGTCAATAATTACTCCAAATAAAGAATGTGTTGCCAGTACCTCCTTTGTCAAATTTCAGGTCAAGAAAACAATGCCATCATTAACAAACGGGGACCATCTCTGAAAATACACACACCTTTGGCACTGGCCATAAACCTACAGGCCTTATCACACGGTGTGCACAAACTCTGGAAATAGAGGTAATATTCTATGTTTTGTAACAGACTGATGATGACCTTGATGACAGCTTATATACTTGCCTGTTTCTAGACTGTGTGGATACCCTGTACTTGGGGATAAGAAAGCAGAGAGGCTGTGGCACAGTCTGCAGCCCAGGGGGAGGGCAGCCCGTTTTCTGATTAACTGCTGAGGTCTAGAGATTGACAGTTCATTTATACACATGGGCGAGGCTATTTACATCTGCACTATCGCACATAACCTTATTTGTACACTCGAGGAGGGGGGGGAAACCAAGATTTCTCTCTGTAGTAACACTAAGAAGTGTAGTTAATGCATATACGTGAAGTATGGCAAAACACTGGAAGAAAGGTTTTTTTTTTTACCAGCTAAAAATGGATCTCTATTCCTAAAGATGTAATAGATAAGTAAAAGCAGAGAAAAAAACCCAAACTCAGAACAATGACCTAGAGTGTTGCATGTTGCATTTGAACTCTGAGGATGGGGGCGAAGGGGACCTTTTCTGCATAAAGACTCAATTGTTCCCGAATCTGAGAGATGACTATTATAGCCAAATCTGCTGAAAACATCCTGTTTACATGGCAGAGAAAAGGCTAGGCCTAAACGTTCTGCTCAGCACACACGACATATTCATTCTGTTTAAGAGTCAAGATGGCAGAAGAGAGGAAAAAACAGAATGAAAAAGTACACAGCATCAGAGGTCAATATGGAATCTGGCTGTTAACCTTACAAAAACTGCCCCCTCCCCCCACAAAAGTGGTGAGTGAATCCTTGTCATTAGTTAATAGTCTGTGGAATTTTAGCTTCTGCTAGCTATATTAACAACAGCTCTCTTCCAAATTCTTAAAGAGATTTCTCTTTTTTTTCTTTCTGCATATCCTTACACACCACATTCAACCCATAGGAACTTGGAAGAACCCATTGCTAACTTATGCTACATTCACGTCAGAAGAGGTGGGTAAGTTCTTAGAAAAGGAGTCATAGCAATCACAAATCAAGATGCTAAAACAGACTGAATGGCAACTGAGGCGTAATGTTGACTGACTGGGGGACACTGATGGAAGACTGTGCTTTGGAACTTTAACTTGCAGCACTGCTAAGTTAACATCTGTGAATGCTGTAAATGAGAGAGATCGAGGGCTGGGGACTGGAGAATCTGAGATGCCACATGGACCATCCATTTCATCACAGTATCTCGGAGATCTGTACTTTTTTTTTTCTTAAACACCTAAAATTAGGTCATGGCACTGGATCTCAATTGCCTGGGGAGGTCCCGAGTCTGATGGAAGACTTCCCTTCCCCTTCTAGTGCTTCCTTCCTTTTGGCCACTCATGTGGTCAACAGAAACCAAGTTCATGATATTTGAGAGCTGGACACCTCTGGCCACTAGTAATCAAGTGTCTTAAAAAATGACAGGAACCTGGTAAAAACTGGAAAGCACAAATGTACATGATCAAAATGTTCATAAAGTAAATCTGTGTAATGTGAGGTGACCAGCAAGCCCCTGAACCCATGCCAGAATGTGGTGGAAGAAAAGATGCTTCCATCGCATATCTAAGTGTCCTGAAGCCATCTGACCTCCCAGCAGAGATGGCTCTTGCCAAGGAATATGGTGGAAAAGAAAAGTTTTTCTCTTCCATTGTATCCTCACAATATCCTGTTCTTAGGTCACTGCCAACCAGTAAAACAAAGCTTCCAGCAACACGATAAGGAAAAGGGGGCTTGACGGGAAAGGGAAGAGACACAGGACAAGAGCAGAAAAATAGGAACCCCTTCCTACTGGCCTGACACAAAGAGACGTTCCAAGTCACTGCAGCTGTCACTCGAGAAGCTGATGCACAGAGCCAGGAAGGCCCTTGGCATCCCACATAATCGAGACATAAAAGCGTACTTTTCATTTCCTTGATTTCTGTTTAATGACTTTGCATTTAGCCCACTGCCTCTGGGGCCTGTCCAGAACCACTCCGATTTCTGTAACGGGTGGGCATCTCACCATCTGGAGGGACGAGACCACATGCACATACACACGCGTTCCCCCTGCTCAGGATGTCTGAGTGTATGTACGAAGGCACTAAAGCGGTTTTAGAGAAATTGCAGGCAGCAACCCCACCCACTCCCTTTACCTGTTGAGCTGGAGTTTCTTTCCCCACCGGGAAGCTTAGATGTTTAAAAGCAGCTGTGGTCATGCTTGGGAATTCTAACCCCTGGCCCCAGGAGGGAATACAAAAGGAGAATTCAACATCACCAAAAACTGACAGGAAATACTCCACATCTCCGGCTGAGGGATGGGGATAATTAAGCAGCAGATCTTCAAAACAGCAATTAAAATGAGCATAACAGTAGCTGGGAGCTAAAAAAAGTAAAATCACTTGTTCCTTATTAGATTCTTCTACTATTTTCTCCTCCTCCCATAGCAAACGGAGGTAAGACACACATTCTTCATTAATAGAACAGTCCATAGATATTTTTCTTCTAGTAATGCCTACATTTAAAATTTGTTCCAAAAATTATTAACCTATATTTCCTAACTCTTTACATAGATTCTCAGCAATCCAACCGTAATATTTTACAGATTAGAGCTACTATTTTTTTTTTAAGCTGTTGTTTCTTTCTTCCTTTCTTTTGTTGCTGGGGTTGGGGAGACAGGGAGAAAGGTTCCTTTGAATAAAAATAAAAATTCCTCGGGGAGATTTTAGCTCAGTCTTAAATGGAAAGAAATAAAGTGATGGCAGTCCCATTTATATACACCAAACACTCTCCCCTTAAATTATACATAATTTGAAATGAATCCATGATAGAGCTCTTATAAAGTTTAATCCTTCTCCCATATTTTTTAAGATAGTCAATTTACTTGTTGCTGCTAAATTGATAATTTTTAAAAAATATTTCTTTCTATGTGTTTTAAAATGTATGATCACCCAGTATGACAATAACTTTTGGAATCTTTACTTTTTACATTTTTTTAAGTAAAAATTGTTTAAACTTTCTGAAGTTTCAGGAACTTGTAAAAGTTTACTAACAGGAAAGAAACGGCCGTCTATCTAGGATAAGATACGGTTAAATAAACCATCTTCCAAAAACTGGCTTCCTACCCTAGAATTCCTGAGAATGCTTGCAAATTTTAAAGCAGGAAAATAAATGTTAAAAACAAAAACAAAAAACACTGTTAAATGCTCCCAGAGTTAGTCTTCATCTAAAATATATATTTATATGTATATATATACGCACTTTTTGGTCTTTTTTTAAGTTTTTAGTTTTTTTCCCTTTAAGCTTATGATGGAAGAACATTTTAGCTTCTCATGTTTATTTTATTTTTTTTTACATATTTCAAATCCCTCATTATGTCTTGTAAACAAGAGGGGCTCTAGCACCCGGCTTTCACCGTAGTATCGTAAGGAACTCAACTAACCCATAGTGCAGGTCAAGGAACCAACAGGCAGGAAGAGAGGAGGGTGGGGCAGGACACGGCAGGGGCCACGAGCAGCAGTGGACAGTCACCACAAGCTCGTGTGAGCCCAAGACACACAGCCGGCCAGGGACATTCAGAGCTAGCCTTCTGCGGATGTCTGAACACAGCTGCTCTTCAGCTGGAGGTCACCACGCATGGCAGGGTTTTGCCCTCCCCCACGAAGAGAGCGGTTGGCGGGGGCTGGAAGGAGATGTTTTGTGCGTGGGCAGAGTGGAAGGGGCGTGGTGGCGATGGAACCGGAGGGCACAGTTAGTTTTCTACAAGGCATCCAATGGGACCAAACCAACACTGGGAACTCGAGTCTGACCACCCACCCACGAAGGGCTCAGAAAGACTTGAGTGAGCCAACGCTCACTTGAGTTACGTGTGTCAATCTCTTTCGANN TCONS_00193455 TCONS_00193456 TCONS_00193458 r 3' 2011 TCONS_00193455 TCONS_00193456 TCONS_00193458 r 3' 11919 EMBV3_19784 GTCTAGTTCCCTGACAAGGGATCAAACCCAGGCCCTCTGCATTGAGAGCACAGAGTCTTA Gene BVV0102_334929 + 1 EMBV3_24161 GK000017.2:55393260-55400570 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092318 TCONS_00092319 1 XLOC_056859 Coding TCONS_00092318 XLOC_056859 Coding Coding MRM1 19:13248521-13260040 = TSS69502 3909 1 TCONS_00092318_3 360 0.25863392171911 5 0.661052266018406 0.00048925926376357 5.95867412542041e-07 0.00133952398265067 0.000459364059419808 1.25791013669241e-09 4.47290029091346e-05 2.3306771172897e-08 3.13125423031044e-08 0.000540229695810715 2.66330683690011e-12 8.22050952965702e-09 1.27417170166788e-12 2.53499255124626e-09 1.89648420728264e-08 8.82147213639321e-10 0.000245607623769463 0.000810523384892166 1.83129055372628e-05 0.000673729417646341 0.000253801361541205 8.87349991822687e-08 6.30978036728405e-05 3.54213226059808e-12 1.38971014954249e-11 0.000997113974039105 0.000138091884048993 0.000229049212128918 0.000341619145976715 4.75906600348566e-12 2.55608132966635e-12 NM_001101126.2 MRM1 Bos taurus mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) (MRM1), mRNA. 0.0 2284 99.92 0.324379636735738 NM_024864.3 MRM1 Homo sapiens mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) (MRM1), mRNA. 0.0 1108 77.57 0.360194423126119 TCONS_00092318_3 sp|Q6IN84|MRM1_HUMAN MRM1_HUMAN rRNA methyltransferase 1, mitochondrial; 0.0 524 76.11 0.997222222222222 2 coding 0 0 0 0 -0.0664271658468845 0.55076926843039 0.0251572791740806 0.594435829329366 TTTGCGGACGCAGCCGGGTTATCGACCATGGCGCTGCCCCCGGCCGTCGGGACCGCGACCTGGCCCTGCTGCAGCCTCCCCCTCACGCGTCCTTTCTCCCAAGCGACGCGGCGCTGGGGGCGGCCCGGCGGGGAGGAGCTCGGCCGCCTGCCCCTGGATGACCTGGCGTCGATGCCGCGGTCGGCCGGGGGCCCGGAGCTCCTGTTTGGCCTGTCCCCGTGCCTCCTGGCGCTGCGGGCCGCCCGCCGCCGCGTCGCCCGGCTCCTGCTCCAGGCCTGCAGGTCTGGGCTGCAGGGGCAGCGGGCCGAGCTGCTGCGCGCGGCCGAGGAGCGGGCCATCCCAGTGCTGCGGCCCCGGCGGCGGGAGCTGGATGTCCTGTGCCGTCACCAGGTTCACCAGGGCGTCTGCATGGAAGTGAGCCCCCTGCGGCCCCGGCCCTGGGCCGAGGCCGAGGTGGCCCGGCCAGGAGACGACCCCCAGCAGCTGTGGCTCGTCCTCGAGGGGCTACAGGATCCCCGGAATCTTGGGGCTGTGCTGCGCTCCGCTCACTTCCTCGGAGTGGATAAGGTCATCACCAGCCGGAGAAACAGCTGCCCGCTCACTCCAGTAGTCAGCAAGGCCAGCGCCGGGGCTATGGAGGTGATGGACGTGTTCTCCACTGATGACCTGGCCGGTTTTTTACAGGCCAGAGCCCGGCAGGGCTGGCTCGTGGCTGGCACAGTGGGCTGCCCGGGGCCTGAGATCGCCCTGTCCTCCAAGATCCCCGTCACTCGCTGCTTGGATTTCCTCTGGGACCGGCCTACCCTCCTCGTGCTAGGGAACGAGGGCTCTGGTCTGTCTCGGGCAGTGCAGGCCTCCTGCCAGCTTCTCCTCACCATCCTGCCCGGCCGGCAGCTGCCTCCTGGACTCGAGTCCTTAAACGTCTCCGTGGCCGCAGGAATCCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGGTTCCCAGTGGAACGGAGGAGAGAGCAACTTCTCCATGACCCCCAGGATCCCTCGGCCTCATCTGAAGCAGCCAGAGTGGCTCAGCACCCAGGACTGTCCTCAGGATCAGAAAAGAAGAGACAAGACGGGGGCTAACCGGGACTGTCCATGGTGTCTGTGTGCTGGGGAGCGCACGCACCCACACCCTCGAATGTGCTGGAGTCTCTTTGTCTTATGAGTGGGCATCAGGCCTCTGTTTATAAACCGCTATCCTGGGGAGCCATGAGCTTTGCAGTAGAGACCACAGGAAGTTCAGTTTCCCGTTTTTTTGGACTTTCGGTTGGAGATGGCAGCCTATTGATTTCTACGCTGTGCTGGGACAGAGGGTCTCTTTCTTCCCAGGTCCCGCCTGGAAGCAAGGGGGAGTTTTGGACATCAGAAGGGGATCGGGCAGCCCCATCCAGGGTCCTCTTCCTCTTGGATGGGTGTGAGAAGGCAGAGGAAAGCCCGGGGCACTCCTGTGGGCCAGACAGGTGCAAATCCAGGCTCAAACCCTCTGAACACACGACTTCATCTTTCTAACCCCCAGGGCTGTTGTCAGGATCCAGTGAAACATCACTTGATATCCAGCAGGCACCCCTTCTCTCTGGTTCGTCCACTAGGTGGCAGCCTTGTTCTTTGGTCCACGGTCCCTTTGGCAAGCTTTCGCAGCCACCTGGGGAGATTCCTGGCTGTGGCCCACCCCAGAGACACAGGGGAAAGATTAGCAAATACCTATCAACTCACTGGCCCTCCAGTACCCACCATGGGTGAGTTAGTCGGCCTCCATGGAAAGACCTGCCGAACCAGAGTTCTGGCCTTTGATTCTGGGAGGTGGTGAGGACCTTGCAGATTTGCCATTTGTTGTACAACCCAGACAGATTCGGTACTACTCTCCCAGGCTCCCGTGAGCAGAGCAGAAGCCACTAGGATAAGTAGCTTAGGGCAGTCTTGGCTGCTGACTGGAACCACCTGGCAAGCTTTGAAAAGAAGCTGACACCCCCTCAGCCTGATGTAATTGGTCAGTGTGCAACGTGAACATCCGACTTTTTTTTTTTTTTTTTAAGGATTTTATTTGTTTTCTTTTTTGGCCGTGCTGGGTCTTCATTGCTGCTCAGGCTCTTCTCTAGTTGCGGAGAGCAGGGGCTACTCTAGCTGCAGTGCACGGGCTTCAGTAGTTGTGGCAAAGGGCTCAGTGGTTGCAGCTCCCCGGCTCTAGAGCACAGGCTCAGTAGTTGCGGTGAATGGGCTTAGTTGCCCCGCGGCATGTGGGATCTTCCCGGATCAGGGATCCAACCCTTGTCCCCTGCATTGGCAGGCGGATTCTTTACCGCTGAGCCACCAGGGATTTCCGAACATCCGAATTTTTAAAGCTCCCCCAGTTGGGTCTCAGTTGCAGCCCAGGTCGGGACCCATTAGGTTTCTACTGATGTTCTGGGCTGGGTAACTCAGGGCATTTAGCAGCGTCTCTGGCCTCTGTCTACAAGATGACAATAAGCACCCTCTCCCCCGAGTTGTGACAACCGAAAACGTCTCCAGACGCCGCCTCCAGACGCCGCCGTGTGTCCCTAGGGGGATGGAACGAGCCCTTGAGCAGCACTGCTTAGGAGCGTGGGTCTGGGGGATGGCCGCCGAGGCACAGGTCCTGATGCTCTGACTGGCCAGTTCCTCCCCCTCCTGCTCCTCAGTGGGCGGGGATAATCCTGCCTCCCTGGGTGGCGGGGAGGAGAGAGGCCAGAGAACTCAGGGCCATACACACTGCAGGCGCTTGGTAAGTAGTACTGCCCTATTCTCTGTGGGGTGGAGTCAGCTCGAATTCTAATGGTGATGCCAGTTAGAAAGACACTGAACTTCAATTTTTAAAAGGCCAAAGATGGGACTTCCCTGGCGGTCCAGTACTTAAGACTCTGTGCTCCCAAGGCAGGGGGCCTGGGTTTGATCCCTAGTCAGGGAACTAGATCCCACGTGCTGAAGCTAAATCTGGTGCAGCCAAATAAATATTTTTTTTAAAAAATAGTATAATTCCAGCTGATTTGGATAGTTGCACAGCAGAAAACAACGCAACGTTGTGAAGCAGTTTTCCTCCAATTAAGTGAAAGTGAAGTCGCTCAGTCATGTCCGACTCTTTGTGACCCCAGGAACTGCAGCCCGCCAGGCTCCTCCATTCCTGGGGTTTTCCAGGCAAGGATACTGAAGTGGGTTGCCATTTCCTGCTCCAGGGGATCTTCCTGACCCAGGGATTGAACCCCGGGTCTCTCTGCATTGCAGGCAGACTCTACCATCTGAGCCACCAGGGAGTCCCTCCAATTAAAAAGTAAATTATAAATGAATGAAAGGGACAAAGATGGCTTTAAAGTCAGAGCTTTTCCTCTCAAAAAGGAGGAAGAACCCCTCCTTCATACACTCCATAGATCTCCATCACACAGGTTTCTCCCTGAGCTCTGTCCCTGACTGCCACACAGATGTGACCTCCATCCAGCTCAGGTGTACGACCCCACCTCCCGCATCACCTCTGCTCTCTCCACAAAGAGGCTAGTGTGTTTTTGTTTTTCTTCTGTTTTCTGGCTGCACCACATGGTAAGTGAGATCTTAGTTCCCCGCCCAGGGATCAAGCCCATGCCCACTGTAGTGGAAGCGCTGAGTCTTAACCTCTGACCACCAGGGCGGTCCCCCTTGTGTGGTTTCTGGCTGTGGCCATCCTTAGCCTCGTGGGGTCAGGGAACGGGAGGGTCACTTGAATAGTCCAGGTGTGCAGAGGTACAGGCTGACTGAATCAGCATCTCTCGGGAAGAAGCCAGGCACCAGCATTTTTTTTTTTTAGAACTATCCCGCTGATGGCCAGTATACAGCCAGTTGGAGAATCACTGGCTGTCACATTACTACATATGTCCAACTGCTTCCAAGTCGTTCACACCC EMBV3_13902 AGGCTTCTGGTTTCACACTCTTGTGCAGCTCCCTGTGTTTCTGTGGTCTCTCCTGAGCAT Gene GeneID:505204|ANKIB1:XM_002686642:25_cdna Constitutive 0 NULL GeneID:505204 4 GENE ANKIB1 NULL ankyrin repeat and IBR domain containing 1 EMBV3_22848 CACTTCCCATTAGACCTGGATGTGACCATGAAAGCCATGATTTTTGGAGCTTGCTTCCTC Gene GeneID:539290|PLSCR4:NM_001081732:53_cdna UTR3_Alt 2 NULL GeneID:539290 1 GENE PLSCR4 MGC148451 phospholipid scramblase 4 EMBV3_32348 GCAGCTATTTTGCTACCTCTACCTAGCTGCTTTCGCGGAATATCTTGGCATTACACCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01530 TGTGGTCCTGACTTGGGAACTTGCCCGGCCTCTTGCTTCATTTCACTGGGACAGAGTATT Gene BVT0102_034571 + 0 NULL GK000006.2:64750900-64882681 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119259 TCONS_00119260 TCONS_00119257 TCONS_00119258 1 XLOC_072846 Coding TCONS_00119260 XLOC_072846 Coding Coding C21H15orf17 21:34181384-34186883 j TSS89350 2577 2 TCONS_00119260_2 187 0.142801707411719 6 0.532375409239723 1.94774177842847e-05 5.7041507978861e-11 2.26648712036025e-56 5.33332058987615e-14 6.70497542799839e-17 1.97465938196586e-68 5.41717143965306e-10 3.23028029885693e-15 2.27551842634565e-24 6.01250578695331e-06 2.72104598771163e-10 8.25070300478844e-28 5.21223217870006e-05 3.29801584347864e-38 3.20894150905796e-11 0.00126193495874336 5.40914988935417e-09 0.00258319585532489 2.41892650595987e-70 1.08183856608995e-09 3.27376460527496e-10 0.000302603251719663 9.12718091459955e-05 0.000354327333284008 1.37219358669831e-09 7.91722564199652e-15 1.56463420323897e-23 0.00010856255056589 2.22631504429339e-05 2.80630826348415e-06 XM_005221991.1 C21H15orf17 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf17 (C21H15orf17), transcript variant X1, mRNA. 0.0 3602 99.85 0.778036476523089 NM_020447.3 FAM219B Homo sapiens family with sequence similarity 219, member B (FAM219B), mRNA. 0.0 706 73.22 0.42918121847109 TCONS_00119260_2 sp|Q5XKK7|F219B_HUMAN F219B_HUMAN Protein FAM219B; 4e-59 187 81.75 0.636363636363636 1 coding 1 1 1 0 -0.153782681531819 0.310922909421654 -0.0425688057449156 0.460193130764806 ATGGCGACCGCGGATCCCGATGGGCATGCTGCGCCCTCTATCCCGGGACCCCGGCCCAGCGGGACGGGAGCTGCGGGGCTGCCCTCCGGGCGAAGCGGCATTGGAGCCCCCCGGTTGGGAGAGCGGATCCCGGCGGCTGTGGAGAAGCGGGGCCCGTACATGGTGGCGCGTGCGCCTTCCATTCAGGCCAAGCTGAAGAAGCACCGGGACCTGGCCAAGGCGGTTCTGCGGAGAAAAGGCATGCTGGGGGCCGCGCCGAACCGCCCCGACTCTTCAGGGAAAAGGTCAGTGAAGTTTAACAAGGGCTACACTGCTCTTAGTCAGAGTCCAGATGAAAACCTGGTGTCCCTCGACTCTGACAGGGCTGCTGCTTCAGAGCACTGTCTCTTCCGGGATGGCTTGCTTAGAGGACTCATAGGTGACCTTGCTGCTCTTGGATGTGAAGCACCAACCTTGTCTGGGGGAGTCATCCTGTCCTATTATGTCTGCATTATTAGTGACAGTGACTCTCCCTGCTGGAGCCAAGAAGGAGCCATTGATACTCATGGCAGATTATGGGTTTGAGTTCTGTGTGATGGAGAGCTGGAATCCAGATACTCCTCCGGGTATTCCTCTGCAGAGCAGGTGAACCAGGATGTGAGCCGGCAGCTGCTCCAGGACGGGTATCACTTGGATGAGATTCCAGATGATGAGGACTTGGACCTAATTCCTCCCAAGCCCATGACCTCAACATGCTCCTGCTGCTGGTGCTGTCTTGGGGCCTCTTCATCCTGTACTCTCCAGTAGACATAACCCTCTAGGACAGGTCTTGCTCACCATGCCTGCAGAGTCCTCTTGACCCTGCATTGGTCACAGAGTGCAGTGGGAACCTACTGCTGTCAACCCCAGGATCACTGGAGACACTGACCCTCTGGGAAAGGCAGTGACTGCAGTTACCCCAAACCTGGTGCTTCTCAGGCCAGAGGCCCCCATCTGGGTCATAGGGTGACAGGTGGAATTCTGCAGTTCTCTGCTGTTGGAGTAGCATTTGGAGAAACTGCTTTAATAAGGGCAGGAACACAGGAATTCTGTTTCTTATGCTGAGTGACAAAATTGGTGAAGAGAAACTTGCAGACTTCTTGATTGGTATTTGTCATGATGCCCTGTGGAGGGAAAAAGGGAGCTTTTGTGCCCAGGCTGTGCTGGCTGGTGTTGCATGGAGGCAGAAAATAGCACTTTATGGCTTGCAGCTGGGAGTCTGTGGAAAAAGAATTTAACTATTTGGGGCCAGTTCAGTTCAGGAAATTCCATATTCTCTTCTCTTCCAAGCTCCAAGATGGGTTACATGTTTGCCAGTTGTTCCTGTATGACTGTGGCAGAGAGTACGACAAGTTGCTTGATGGCACAGCCTGATCAAGGCTTCCAGAATCCTTGGAAGCTGAGCATTCCCAACTGGTCCATGTGTCTGTGTGAGCTTAGTAACTTGTTTAGTCCAACCCTAGTTAGAGAAAACTAACTCTACTCCACCGGGTAGACAAAATTTCTTTCCTTGGTTGCCATTCTTCACCTTGGTCTTAGCTAATATCTTCACCAGTCTTTGATCTAAGGTTGAATGAAGGTTCTGGAGCTGGCCACAGAAGCCTGCACTTTTTGGTTACCAGCAGAGGGAGCTGCAGGAGCAGTTAAGTGCCTTCCCATTTGGATTTTTTGTTGTTTTGTGAGATCTTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTAGGCTGCAGACCATGGGGTCGAGAAGAGTCGGACAGGACTGAGCGACTTCACTTTCACTTTTCCCTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGAGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGTGCCCCAACCAGGGAGGGGTGGAACTCAGGCCCCTGAAGTGGAAGTTCAGAATCCTAACCACTGGACTACCAGGGAATTCCCTCATTTGTTTAACATTTTACACTTGAGAAGCAGCAATGGTGAGATGTATACTGCACAGCTGTGTGGGCCCTGACATAGGCTGACAGGATAAGGAGGAGGGACCTGTGGAAGCTCCCCAGCTATCCCTCCCAACCCAACCTAAGGAGATAATCTTGCCATTGCAGAGGGCCTCCCTCCACCCTAGTGAGAGCCATTCTGTTGCATCCAGATTCCTCTGACCACAGTGGATACTCAAGATTGGGCTTTACAGTCAGCCCCCAGTTTGAACATAGCAAGGACAGGCATAATCTCCCGTGACCCCTACTAGATTGCATCTCTTGCTGTACCAGGCCTCTGAAATTTTTCAGTGGTTCCTTTTTTTTTTTGCCTTACCTAGAACCAGATGGAGCTGAATGGGAGTGGACAGGGGTAGGGTAGTGAGGATTGAGGTGTGGTCCTGACTTGGGAACTTGCCCGGCCTCTTGCTTCATTTCACTGGGACAGAGTATTTGACAGCTGCTGGGGGTGAGGAT EMBV3_31977 AAGTGTACAGCGTGCCCCTGGATGCCCAGTCTGATGACAGTAAAACTTCTGTGAGGGATC Gene GeneID:534739|ANKRD12:XM_002697743:242_cdna UTR3_Alt 2 NULL GeneID:534739 24 GENE ANKRD12 NULL ankyrin repeat domain 12 EMBV3_19019 AGTGTGACGACCGAGCGCAATGAAGCACCAATCACAATGGGGTCTGAAGCAAGTCCACTC Gene GeneID:516658|LOC516658:XM_002692501:619_cdna Constitutive 0 NULL GeneID:516658 13 GENE LOC516658 NULL similar to C27H2.2a EMBV3_21487 TACATCGTGGCCTCGGTGATGCTCAACGTGCGCCTGCAGGGGCATCAGCATGAAGGATCA Gene GeneID:100139604|LOC100139604:XM_002707879:2_cdna Constitutive 0 NULL GeneID:100139604 X GENE LOC100139604 NULL similar to mCG1039243 EMBV3_00923 ACATCCTACATCCGAGTTTATCCAGAGAGAAGCACCAGCTATGGCTATTCACGGTCTCGG Gene GeneID:509905|SFRS9:NM_001083398:108_cdna Constitutive 0 NULL GeneID:509905 17 GENE SFRS9 MGC137846 splicing factor, arginine/serine-rich 9 EMBV3_13113 GGCTACTGTTTTGCTCCCCACCCTGAAATTCAACACTTGTGTCTGTGCAACTGCTGAGCA Gene GeneID:513188|TMEM27:NM_001075603:23_cdna Constitutive 0 NULL GeneID:513188 X GENE TMEM27 NULL transmembrane protein 27 EMBV3_28256 GGTCAGGCTCGAGAGAACACGGGCTTCCGTCGTTGTGGTCAGGGCGTATCACTGTACATT Gene GeneID:100141246|LOC100141246:XM_002699005:72_cdna Constitutive 0 NULL GeneID:100141246 29 GENE LOC100141246 NULL similar to hCG20936 EMBV3_26337 AGACCTCCAGGAACACCGAAGAAAGATACCCTAATCAGACAGTAAGGTCCAGCTCCGGCA Gene BVT0102_148507 + 0 NULL GK000012.2:10980783-11020526 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33818 CGTAATTCAGGTGAAAACGTGGGAAGCCAGCGTTTATCTGGCACATACCTGGGCAAGCCT Gene GeneID:100336386|LOC100336386:XM_002693566:243_cdna Constitutive 0 NULL GeneID:100336386 15 GENE LOC100336386 NULL hypothetical protein LOC100336386 EMBV3_04759 CAGATTACGATGTTTCTGTTGTGCTGCCTGAAAACCCTATTACTTATGCCTGGGAAGGTG Gene GeneID:613596|ACTR6:NM_001099124:49_cdna Constitutive 0 NULL GeneID:613596 5 GENE ACTR6 MGC166308 ARP6 actin-related protein 6 homolog (yeast) EMBV3_04945 TCATCTTTGACTGATGGTGGCCCAGGTGACCCTGATCTGCGGCAAAGACGTCCTCTCTGA Gene BVV0102_349882 - 1 EMBV3_24681 GK000003.2:9702148-9705463 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171935 1 XLOC_103954 Coding TCONS_00171935 XLOC_103954 Coding Coding KCNJ9 3:9702761-9709562 = TSS128146 3920 1 TCONS_00171935_2 405 0.108163265306122 2 0.423823529411765 0 0 4.72141991209793e-06 0 2.33282292609375e-12 2.62962950192819e-12 0 0 0 0.000341125306960849 0.000550106673941308 7.75338708208735e-05 0.000139804499880134 0.000490498919716304 3.95878298916364e-12 8.98176848643794e-06 5.50586236670226e-05 6.400753161614e-06 0 0 0 0.000270702940688985 7.02095677712965e-05 4.27668578105198e-06 0 0 0 0.000242579939554328 0.000213008093428534 1.6871103655017e-05 XM_005203542.1 KCNJ9 PREDICTED: Bos taurus potassium inwardly-rectifying channel, subfamily J, member 9 (KCNJ9), transcript variant X1, mRNA. 0.0 7048 100.00 0.996683673469388 NM_004983.2 KCNJ9 Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 9 (KCNJ9), mRNA. 0.0 2051 84.28 0.468112244897959 TCONS_00171935_2 sp|Q92806|IRK9_HUMAN IRK9_HUMAN G protein-activated inward rectifier potassium channel 3; 0.0 741 95.56 0.997530864197531 1 coding 0 0 0 0 0.0116721651659997 0.948375985690855 0.000321873413687529 0.995996529836567 ATGGCTCAGGAGAACGCAGCCTTCTCGCCGGGCACTGAGGAGCCGCCGCGGCGCCGCGGCCGCCAGCGCTACGTGGAAAAGGACGGGCGCTGCAACGTGCAGCAGGGCAACGTGCGCGAGACGTACCGCTACCTGACCGACCTGTTCACCACGCTCGTGGACCTGCAGTGGCGCCTGAGCTTACTCTTCTTCGTGCTGGCCTACGCGCTCACCTGGCTCTTCTTCGGCGCCATCTGGTGGCTGATAGCCTACGGCCGCGGCGACCTGGAGCACCTGGAGGACACGGCGTGGACCCCGTGCGTCAACAACCTCAACGGCTTCGTGGCCGCTTTCCTCTTCTCCATCGAGACGGAGACCACCATCGGTTACGGGCACCGCGTCATCACCGACCAGTGCCCCGAGGGCATCGTGCTGCTGCTGCTGCAGGCCATCCTGGGCTCCATGGTGAACGCCTTTATGGTGGGCTGCATGTTCGTCAAGATCTCGCAGCCCAACAAGCGCGCCGCCACGCTCGTCTTCTCCTCGCACGCCGTGGTGTCGCTGCGCGACGGTCGCCTCTGCCTCATGTTCCGGGTGGGCGACCTGCGATCTTCGCACATCGTCGAGGCCTCCATCCGCGCCAAGCTCATCCGCTCGCGCCAGACGCTGGAGGGCGAGTTCATCCCGCTGCACCAGACCGACCTCAGCGTGGGCTTCGACACGGGCGACGACCGCCTCTTCCTCGTCTCGCCTCTCGTCATCAGCCACGAGATCGACGCCGCCAGTCCCTTCTGGGAGGCGTCGCGCCGCGCCCTCGAGAGGGACGACTTCGAGATCGTGGTCATCCTCGAGGGCATGGTGGAAGCCACGGGAATGACATGCCAAGCTCGGAGCTCCTACCTGGTGGATGAGGTGCTATGGGGCCACCGCTTCACCTCAGTGCTGACCCTGGAGGATGGCTTCTACGAAGTAGACTACGCCAGCTTCCACGAGACCTTTGAGGTGCCCACACCTTCATGCAGCGCCCGGGAGCTGGCCGAGGCCGCGGCCCGACTGGATGCCCATCTCTACTGGTCCATCCCCAGCCGGCTGGACGAGAAGGTGGAGGAGGAGGGGGCTGGAGAGGGGCCTGGAGAGGAGGCGGAAGAGGAGGCGGGAGAGGGGGCGGGCGAAGGGGCTGGGGTTGACAAAGAGCAGAATGGCTGCCTGCCACCCCCAGAGAGTGAATCCAAGGTATGACCAGATTCCTTCAGACCCCTGTGGCAGGAGCAGACACAGGTACCTGGGGAGCTGAATATCGTAGGTGGAGAAGGAGTCCGGCAAGGTCCCTATGAATGCACCAAAGCTGGAGAGCCCCCTCAGAATCTCAGGTCTGGGATCCAACTTGGACGGGAGAGATCCTGATTTCAGGAGAATGGAGGGTGGGGATGGGTGAACTTACCCAGCCTGTCTGTGTTTGACCTTCCTGTCTGTTCATGGGTGGATGCGTGGACAGAAGGATGGGCCTGTGTGAGCCAGATGAGAAGATGGAAGCAGAGAGAGACAGCCAGTAGATAGATAAATGGGCTGACAGGCTGGTGGAGCGCTCAGGGCTGCCGCTAACTCACAGAGCATCTTTGTGCAAATTCTAAAAAGGCACCCTTTTCCTCTAGACTTACACCACCCTAAACCAGGGTGCACAGCTTGGGGAGCAGATGTGGGCTGCATTTTAGTCCCCACTCTTCTCCTCAGCCAGCCTCCCTGAGTCTGGCGCTTCTGTCTCACTGGACGCAGCAGCCCGAGCTAGCCCAGGGCAGAGAAAGCTGGAAGGGGGCAGGCAGAGAGGGAGAGGCTGTCCTCCTGCCTCCACCCTCACCACCGTGACAGGCTGAGGGCAGGCTGAGAGATTGCGAGGGCAGCTCAGTAGGGTGTGAAGGAGGGCTACAGGGAAGAGTTTTAGGACTAGGATTGTGGAATGACACAGGAGAGGTAAGGCTGGGGCTGGGATCCCCTCGTCCACGATGCAGGGAAGCCAACTGTAGGGGAGATGCCAGAGCTGGGGCCTTAGGGCCCTGGGGCTGGGCCTGGGCAAGGCAAGCCAGGGACGACCATCTTCTAACAGCAGAGGGAGACCTCAGAAGTGCCACTGCAGAGGCGGGAGGGGAGAGCAGAGTTGTGAAGAGAAGAACGAGGGGAGACATGGAGCTCGTGAATTCACTAGAGCTGGGACACGGGGCCCTCAGGAAACAAGACTCAGTCTTGGGGTACTGTGAGAGGGAGTCATTCACGTGGCTTACTGGGTGCCAGCTGGGTCCGGAGCACTGACCCAGGCATGTGTGGGGAGGATGGCCAGAGATCCGATTCCTATTCCGGAAATACAGCGCATGCACGTGGGAAAGACAGGGACATATGCCTTTGGCAACTGTTTCAAACCAAGAACCTGGGCAATCTCTCTGAGTACGGGTGGGAGGGCTCGATGATCAGAAAGCCGAGGACTGAGTCAGACCTAGAGAGTGACTTTAGCCAGCAGTTGTGAACTGGGGTGGGCATCAGGGTCAACCTGGAGGGCTCGGGGACACAGATGGTTGAACCTCACTCCCATAGTTTCGGACACAGTAGGGCTGGGGCAGAGACTAAAACTGCATTTCTAACACGTCAGGTCCTGATGCCAGAACAGGGACCACGCTTTGAGAAGCCCTCCCCTAAGCAGACTGGGGGTTCTGTCAGGAAGTGGGCATCAAGCTGAGGAGTCGCTGAGGATCCTTGGGAAGGAGACTGAAATATAACGGGTGGAGAATTGTGGTGGAGGGAAAGGGGACCCGGAAACCCAGGCTGAATAGTTTAACTCTGGACCCAGGGACTCACCCGTCAGTGAAAATAGGGCAGCGACAAGCTAGAGATGGGGTTTGGTGAAGATGAGTAGGCATAATAGATAAAGCAAAGCAGCTGGGAGGGCTTCAGGGGGTGTCCTGGGGAGGCAATGGGAGCTAGAGGAGGAAGGGCATCAGTGACAGAGGATGGAATCCCACATGGGACTTGAGGTAGGCTTAAACGTGGGAGAAGGTGTGAGAGAAGCGAGAGTCCAAATATCTGGGTGTGGCTGTGGCCTGCCGTTTGCCCAGCTGGGACAGGAGCCCCTGGAGACATATTCCCATGCCACGTGCATCCCCTTCCTGGCCTCATCTCAGTCACCAGTGAGGCCCTCCATCCCAGGATGATGAAGGGAGAGCAACAGCGAGTCAAGAAGGGGCAGAGACGGGAGGACCTGTGGCTGGGAGAGACGTGTGCACATGCGTAAAGTGCACCATCCCCAGCAGTGACCTCCAGCCCTTGGCCCTGGCTACATCCCACTCCTGAACTTTTAATAAAAGTCTGAACTCCTTGGTGGGGAGCACCCCACGGTGCTGCATTCCAGGCTGCGAAGCTGGGGTCCTATGAGACGCTGTACCTCCTGGAAGCAGGAAGGAGCCATGCCAGCTCAGAGAGGACGTCTTTGCCGCAGATCAGGGTCACCTGGGCCACCATCAGTCAAAGATGAGGTCCCTGCACCCTGGCATCAGTTGTTCACAAAAAACAAATGTTGGGGGATGGAATGGGGTGTGCTTTTGGTTCAATATGCTGAGACAGCTGGAGTCTGGATAGACGGGAGGGGACTGTTGGTGCCCATACTTGCTCCCGTGGGAGTTCACCCACTAAAAATGAACCCACTGCAGAGAACTGAGGCTGGACGGGAGGCCTGAGACCCTGCCGCCCCTCTCCTCATGTTCAGCCACCTCTCAGGGCCCTGCTGTGTGCGGCTCGGGGAGTCTGGAGACCGGGGTTCAAGTCCTGACTCTGTCACTACTTAGTTCTATGACTCTCGGCAAGTCGCGTCACTTCTCTGGGCTTTGGTTGCCCCATCTGTAAAAACAACACTTGGCAAACTGGTAATGCTCAATAAATGTTTAAATCACTGAGTTGAA EMBV3_24232 GAACACACACAGTAGGTAGGCGAAAACAGAGGCGTCTTCAGAACTAGTGCAACTCCAGTG Gene GeneID:540232|CTDSPL2:XM_002691118:50_cdna Constitutive 0 NULL GeneID:540232 10 GENE CTDSPL2 NULL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 EMBV3_21262 CCCTGATCTTGGTCTCCTATATGCGTATTCTCTGGGCCATCCTGAAGATCCAGTCAAAGG Gene GeneID:511401|LOC511401:XM_002687029:102_cdna Constitutive 0 NULL GeneID:511401 4 GENE LOC511401 NULL similar to olfactory receptor OR7-15 EMBV3_43297 AGTGACGCCTGGACTCTTACAGGTTCTGAAGGCTGTGTACTTCGCCTGCTACTCCAAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02058 GTACTGCAAATTCGTGAGCACATTCTGGTGACAGGGTTTAGGGAGAAAATGGGCTGGAGC Gene GeneID:534448|ATXN7L1:NM_001035407:1_cdna Constitutive 1 NULL GeneID:534448 4 GENE ATXN7L1 ATXN7L4 MGC127147 ataxin 7-like 1 EMBV3_20779 TCCTTTTACACCTCGGTGCTCAATCTTCTCAAGGTCAACACAGCTGCAGGCACCACCAGA Gene GeneID:530785|INHBC:XM_002687565:597_cdna Constitutive 0 NULL GeneID:530785 5 GENE INHBC NULL inhibin, beta C EMBV3_08204 GACAACAAGTCCCGGCTGCGCAAGATGAAGAGCTGCCTGGAGTTTAGCCTGAGGATCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42659 AAAGCTTTCCTAGGAGCATTCTGAACAGACTTGCCCACATTCCTCACTGGCCAGACCTGG Gene BVV0102_424134 + 0 NULL GK000013.2:61164403-61176217 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38626 GTATGTTTTGTTTTGCAGACTTTTTGCATACTTATTTCTACATGGTTTGATGGACTGATG Gene GeneID:539141|PSMA2:NM_001034662:58_cdna Constitutive 5 NULL GeneID:539141 4 GENE PSMA2 MGC127174 proteasome (prosome, macropain) subunit, alpha type, 2 EMBV3_37827 TCCCTCAGCCTGCTGAGCAGGCTTCCCCAGGCTTCGGTTGCAGGCCAGGATTCAGATCGT Variant GeneID:515459|HEMK1:NM_001035308:181_cdna 759^823 1 EMBV3_07458 GeneID:515459 22 GENE HEMK1 MGC127489 HemK methyltransferase family member 1 EMBV3_26208 ATACTCACACTGCTGCATGTAGCTCTTGCTTATTTACCGGTCTGAGGGAAACAGAATGTG Gene GeneID:511058|PPP6C:NM_001130750:14_cdna Constitutive 1 NULL GeneID:511058 11 GENE PPP6C NULL protein phosphatase 6, catalytic subunit EMBV3_27247 AGATCTGGATTGTGAATGAGTCTCCAGCTCCCAGCACTGGATTCCACCCTGGTTTCCTTT Gene GeneID:523017|C14H8ORF38:NM_001105389:51_cdna UTR3_Alt 2 NULL GeneID:523017 14 GENE C14H8ORF38 NULL chromosome 8 open reading frame 38 ortholog EMBV3_07395 GCTAGACTGGGTCCACGGCCGCATTAGCAACTTTCACTACCTCATGCAACTGAATCGGTT Gene BVT0102_282121 + 0 NULL GK000019.2:23382520-23393585 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099218 1 XLOC_059461 Coding TCONS_00099218 XLOC_059461 Coding Coding - 19:23390779-23393493 - TSS73594 2714 1 TCONS_00099218_7 871 1 0 0.000471235035245441 0.000129585598722529 0.000255729414485537 8.87326379649948e-05 0.00020374488060098 0.000112030232004724 1.71899502470838e-05 8.06353570096496e-05 0.000447709264861917 7.58012930431618e-06 1.68694544968686e-06 0 2.11442949140791e-06 0 6.68863905809187e-05 0.000389264344906668 0.000177401006161076 0 1.58532046000534e-05 5.0345297362088e-05 0.000615199529894379 3.55448511925516e-05 8.78869377460436e-05 1.23541751351431e-05 0.000776071322892639 8.30710547650864e-05 8.41956653552305e-05 7.07824361585506e-05 0 1.77221685792751e-05 XM_005220153.1 WDR81 PREDICTED: Bos taurus WD repeat domain 81 (WDR81), mRNA. 0.0 4895 100.00 0.999631540162122 NM_001163809.1 WDR81 Homo sapiens WD repeat domain 81 (WDR81), transcript variant 1, 0.0 3047 84.87 0.991156963890936 TCONS_00099218_7 sp|Q5ND34|WDR81_MOUSE WDR81_MOUSE WD repeat-containing protein 81; 0.0 1489 83.49 0.998851894374282 1 coding 0 0 0 0 -0.106493418127123 0.400935125554637 -0.0342202324342472 0.520563303078036 AGTCCCTCGCTCACCCCTACCCACCTGGCATCCCGGAAGCCGAGGCGAGGGGGGCTGTGGCCGGGCTCAGCCCCGCGCTGCCCCCAGGCGGCCAAGAGGGGATGGCCCTGAGGAGCAGGGGGCGGGAAGTCGCGCTTACCGCGAAGGCGGAGGACTGGTCACCGCCCCCGAGCCCCGACATGGAGGAGCTGCTCCGGAGCGTGGAGAGGGACCTGAACATCGATGCCCGACAGCTGGCTCCGGCCCCGGGGGGCGCACACGTGGTGGCTCTAGTGCCCGCGCGCTGGCTGGCCAGCCTCCGCGAGCGCAGGCTGCCCCTGGGACCCTGTCCGCGCGCCGAAGGCCTGAGCGAAGCGGAAGTCAGGACTTTCTTGCAACGCTCCGTGCAGAGGCTGCCTGCCGGCTGGACTCGAGTCGAGGTGCACGGGCTGCGGAAACGAAGGCTCTCCTACGCGCTGGGCGGCCTGCCTTTTGAGGAGGGGTCCAGCACCCCGGAGACCCTCACTCGCTTCATGCAGGATGTGGCTGCCCAGAATTATCGCAACCTGTGGCGCCACGCGTATCATACTTACGGGCAGCCCTACAGTCATAGCCCTGCCCCCGCGGCTGTCCCTGCCCTGGATTCAGTGCGACAGGCTCTGCAGAGGGTCTATGGTTGCCCTTTCCTGCCACTGGGTGAAGCTGCACAGTGCCCCTCATATGCCAGAGAAGGCCCCTGTGCCCCTCGGGGCTGCCCTGCCTCTCCCAGTCTTCTGAGAGCCGAGGCTCTGTTGGAGTCACCGGAGATGCTCTACGTGGTCTACCCGTATGTGCAGTTCTCCCTGCACGATGTGGTCACCTTCAGCCCCGCCAAGCTGACCAACAGCCAAGCCAAGGTGCTCTTCATTCTCTTCCGTGTGCTGAGGGCCATGGATGCCTGTCACCACCAGGGACTGGCCTGCGGGGCCCTGTCTTTGCACCACATCGCCGTGGATGAGAAACTTTGCAGCGAGCTCCGCCTGGACCTGAGTGCTTATGAGAGGCCCGAGGAGGCAGGGGATGAGGAGACCCCGGAAGCAAGAAACGGGGCAGGTGTCGAGCCTGGCGAGGAGGGACGACGGGGACCTGGGTGTCCCACCTGCCAGGAGGAGCTCAGGGGCCTTGTGCTAGACTGGGTCCACGGCCGCATTAGCAACTTTCACTACCTCATGCAACTGAATCGGTTGGCAGGTCGGCGGCAGGGGGACCCCAACTACCACCCGGTGCTGCCCTGGGTGGTTGACTTCACCGCGCCCCGTGGGCGCTTCAGAGACCTGCGCAAGTCCAAGTTCCGCCTCAACAAGGGGGATAAGCAGCTGGACTTCACCTATGAGATGACCCGGCAGGCGTTTGTGGCAGGGGGTGCAGGCGGCGGGGAGCCACCTCACGTCCCTCACCACATCTCCGACGTGCTTTCTGACATCACCTACTATGTGTACAAGGCCCGGCGCACACCCCGGTCTGTGCTCTGTGGACACGTGAGGGCGCAGTGGGAGCCCCACGAGTACCCGGCCAGCATGGAGCGAATGCAGAGCTGGACTCCAGATGAGTGCATTCCCGAGTTCTACACCGACCCCTCCATCTTCTGCTCCATCCACCCTGACATGCCTGACCTGGATGTGCCGGCCTGGTGCTGCTCCAACCAGGAGTTCGTGGCTGCCCACCGGGCGCTGCTGGAGAGCCGAGAGGTGTCCCAGGACCTACACCACTGGATTGACCTCACCTTTGGCTACAAACTACAGGGCAAGGAGGCTGTGAAGGAGAAGAACGTGTGTCTGCACCTGGTGGACGCCCACACACACCTGACCAGCTATGGCGTGGTACAGCTCTTCGATCAGCCACATCCCCAGCGCCTGGCAGGGGCCCCTGCCCTCGCCCCTGAACCTCCCCTCGTCCCCAGGCTATGGTTCCACACCATCCAGGAGAGCAAAGGCCGGGAGGACTTCCCTGCACAGCTTACGAATGGGATGGGCAGGACAGTTTTGGAGGCTACTCCCTGTGAGGCTGGCTGGGCCAGGGACAGGCCCGGGGTAGGGGAAGATGAGTTGGAGCAGGCCACAGAAGCTCTGGATTCCATCTCTCTCGCTGGGAAGACAGGTGACCAGCTGGGACCGTCTCCCTCCTCTACTTCGTCCTCCAGTCAAGTCCCGCCAGGCCTCTTGCCTTTCTCAGGGGCCTCAGCCTCTCGACCGGGCCGTCGGAACAGAGCTGCTGGGACAGACCCCAGGGAAGGTGAGGAGGGCAAGATTCTTCTTCCGGAGGGCTTCAGTCCTCTGCAGGCTCTGGAGGAGCTGGAGAAACTAGGCAACTTCTTGACCAAAGGCCTAGGGGGCCACTTGGAGGTGCCTGAGCAACCCTGGGTTCAGCCCCCCGTGCAGCTGCGGGACCTCTTTCATCGGGACATGCAGGCTCTGGGGGTCCTGTTGGCTGAGATGGTGTTTGCCACCAGGGTCCGGACGCTGCAGCCTGATGCACCTTTGTGGGTACGCTTCAAGGCTGTGCAGGGGCTCTGTGCACGCCATCCCAAGGAGGTCCCGGTGTCTCTGCAGCCCGTGCTGGACACACTTCTGCAGCTGAGTGGCCCTCAAGGCCCCGTGGTTGCAGGGAGGGGCAAGCTGGACCCACTGTTTACATATAGGCCCGTCTCCCAGGGATTGCCCCCACCCTGCCCCGCCCAGCTCCTCAGCCCCTTCAGC TCONS_00092765 . 5' 93 TCONS_00092765 . 5' 93 EMBV3_40457 TTGGGTTCTTGATTTGACTGGTGCCCCTGCAACAGCGCAAAGCAGGTAGTGATCGCTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31715 AGAAAGTAGCATCTTGTGACCCACCTACCCTGACCCCCATCCACCATGCTTTGTTGAAAC Gene GeneID:100138951|CD33:XM_002695144:689_cdna Constitutive 0 NULL GeneID:100138951 18 GENE CD33 NULL CD33 molecule EMBV3_32038 TGCACGGGGCAAGAAAAAACAGTTGATGGGATAGTTTATAAATGGAGTCTTCCCATTAGG Gene BVV0101_082157 + 1 EMBV3_20745 GK000001.2:58166588-58169797 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003389 TCONS_00003387 TCONS_00003393 TCONS_00003394 TCONS_00000728 TCONS_00003391 TCONS_00003395 TCONS_00003390 TCONS_00003397 TCONS_00003388 TCONS_00003396 TCONS_00003392 2 XLOC_000854 XLOC_000187 Coding TCONS_00000728 XLOC_000187 Coding Coding GTPBP8 1:58152816-58169890 = TSS364 4284 1 TCONS_00000728_2 288 0.188608776844071 6 0.749428922860657 3.75984249068713e-238 0 3.69564677433058e-285 0 0 0 0 6.39171858092772e-53 3.13099251900106e-05 3.1430344353834e-05 5.02281766625548e-05 3.57859472825626e-84 5.03702466766559e-05 1.96572978571637e-05 5.62313556792764e-308 0.000654213715709454 0.000280117127916046 0.000255953795259961 0 0 2.00258097284952e-136 0.000282923879128172 0.000883484618274877 0.000212812587060543 3.00852368880174e-48 0 3.22787511598051e-06 0.000207560148452926 0.000218721588957107 0.00074496635752519 NM_001075828.2 GTPBP8 Bos taurus GTP-binding protein 8 (putative) (GTPBP8), mRNA. 0.0 1770 100.00 0.228758169934641 NM_014170.2 GTPBP8 Homo sapiens GTP-binding protein 8 (putative) (GTPBP8), transcript 0.0 1074 80.62 0.265639589169001 TCONS_00000728_2 sp|Q0P5E7|GTPB8_BOVIN GTPB8_BOVIN GTP-binding protein 8; 0.0 594 100.00 0.996527777777778 2 coding 0 0 0 0 -0.0111874881226952 0.916319723962194 0.0159814697122697 0.755584636834332 AGACTCTGGGAATGAGGTCCCAAGGTGTGACTTCTAAAAGAGGAAAATGGCAGCGCACCGGCTGCGGCAGAGCGTGGGCAGGCTGTTTGCGATGGGACCAGAACTGGGGAGTGGAAGACGAGCTTTCAGCGCGTTCCAGGCCTTCACGGAGGTTCTACGGCTGCCGAGCAAGCAGCTGACGAAGCTGGTCTTCCCGCTGGAAGAACTCCATGAGCATTTCGTCCCGGGCTCGAGGCCAGACCTTCACCTGAATATCTTCCACCCGAGCCTGGAGGACATCGCGCGGGCGGAGAGTTTCTTCACGGCCTCCGCCCGAAACCGCATCGAGTACCTCACCTCGGCGGTGCGTCTCGACCACGCCCCGGACCTTCACCGCCCCGAGGTGTGTTTTATAGGCAGAAGCAATGTTGGAAAATCCTCTCTAATAAAGGCTTTGTTTTCACTTGCCCCAGAGGTTGAAGTTAGAGTCTCCAAAAAACCGGGCCATACAAAGAAACTTAATTTTTACAAAGTTGGAAAATACTTTACATTGGTGGACATGCCAGGTTATGGCTATAGAGCACCTGAAGATTTCGTTGACATGGTAGAAACCTACCTAAAAGAACGAAAGAATTTGATGAGAACATTTTTATTAGTGGATAGTGTTGTTGGAATTCAAAAAGCAGACAATATTGCCATAGAAATGTGTGAAGAATTTGCATTACCTTATGTGATGGTATTAACAAAAATTGACAAACCTTCCAAGGGACATCTTTTAAAACAAGTGCTTCAGATCCAGAAATTTGTTGACACTAAAACACAAGGATGTTTTCCTCAGTTGTTCCCTGTAAGTGCTATGACCTATTCTGGAATCCATCTGCTGAGATGCTTTATAGCAGATATAACAGGAAATCTTAAGACTACTGGCTTCTAATTTAGTTGAAGATTCAAAATTGTTTGTGCCAACTGCAGTTAAAGACAGAATTTCAACATTGTTTTAAATGTTGTGTATCTGTAACTTGCAGAAGGATCACTTCAGCTTTAAAACCTGCATATGTCCAAAGGAAGAATGAATTTGTGCCTATAGGGGCAGAAAGGTTTATACATGATTGAGTTATGCTGTTCATTAGAAGAGATACCAGCAGTTTTTAACAAACTGACAAACAAGACCATATAGAAGTCCATAAAATGAAAATCTATTTCCTACCGTGTAGATGATAGAGTGTTAGTTACTCAGTCGTGTCTGACTCTTTGTAACCCTATGGACTGTATGTAGCCTGCCAGGCTCCTCTGTCCACAGCATTCTCCAGGCGAGGATACTAGAGTGGGTAGCCATTCCCTTCTCCAGGGGATCCTCCTGACAAGGGATTGAAGTTGCGTCTCCTGCATTGCAGGCACATTCTTTATTGTCTGAGCCATCAGGGTAGCCCCTACTGTGTGTAGGTGACGGTTTGCCATATTATTGGGTTTTTGTCTTTTAAAGGAATATCTATTACTCTATTTTTTTAAATATTACAATGCACTAGGTAAAAAGGGGCTACTTTTTTTGTTAAGCACTGATAGATGGGTTGAAGGTAAATTCTTATGTTGTTGTTCAGTCACCAAGTTGTGTCTTGACTGCCACCCCATGGACTGTTGCACACCAGGCTTCCCTGTCCTTCACTATCTTCCAGAGTTTGTTCAAATTTATGTCCATTGAGTCAGTGATGCTATCTAACCATCTCATCCTCTGCCACCCTCTTCTCCTTTTACCTTCAATCTTTCCCAGCATCAGGGTCTTTATATGTATGGCTATAACTTATCATTTTTTTGGAGACATCATTTGAATATAACAAAAATTATTCTTGATAAAATTTCAATCAGTCCATAATGGAAATACCACTTATTTCAGACTGAGGTCAGTCACTTTCACAGGGTTCAGAATCAGAAGACCAGAATTCAAGTTCCAGTTCTGGTACTTATTATACGTTGGATGTTTCTGAACTTCTTTTGTAACTCTACCTCAGAAGCTATGAAGATTAAAATATGAAAAGAACATCTATTTATTCTATATATTTGTAAAGCAAAACCAATTCAAGTATATAGCAAAACTCATGGGTAGATTTATCACAGAATACATCCTGTCATGGAGGAAGTAACATTTTATCTAGGTTAAGACCAAAGAAGAAAGTTTTAGGTATGAAAGTTGATTTGCACAGGGCAAGAAAAAACAGTTGATGGGATAGTTTATAAATGGAGTCTTCCCATTAGGATTCAGAATGGAAAGATAAAGCCTTACTTTGGACTAATGTTAGTGGAAAATATTTTTATGAAGGTGTTACTGACCTAGTCATACAAGTGGTTTAGCTTTTCAGAGTGAGGCTGTATATTAAAATGTTATAGCAATAGCATTGGATAAAAAATTAATGCTATAAAACAACTTCGACTTTTAGAAAATTCAGTTCTGAATATGTTTTCAGTTTTATAGTTAATACTACTGGTTTATTCTAACCAGCAGTGATTTAAAAAAAACTTTTAATATGGGCATTCACCAAGTGAAATATATATTGATAGTAACAACAAAATTATCTTAAAAGGCATCTTTCTGCCTGCCAGTGTTACTGTACAGTTTGTCTTAGCCTTGGCTTTTGTTCTCCTAAAAGGAGGGTCCAAGACAAAAGCTTGTGTCCAGTAGTTTATTGGGGATGTGATTCCAGGGAACAGGAATGAAGGGGAAATGAAACAGATGGAAGGAAAGCCAATCAAGGATTCATTGACTTGGAAACAACATAGCTCTAGGGCTTGATCTTGAGGGATCTGTGGAACCTTATGAAATGTGCCTCTGAATTGTCTTTGAAGGGGGATTAGCAAGTTGTGTATACCCAAATGCCAAGCAGTCCTATAGCTTGTCAGAGGCATGAAGGCAAGGTGAGGTCGTCCAGTCCTGCTTGAGACTGGTTATGATAGTAGTGGCTGCAGTAAGAGGCCAAGATTTGAAGTGACACATGAGAGGTCTACCACACTGCTCTGACAAATGACCAGCGTGTGTTAATGCCACCAGAAGGGATTAAATTGGTATTTACTATGATGATGCTAACGATTATTTTCTAATTTACTGGGTAAGTTATGGTTTTGTAAATTTAAAACTTAAAACATGTGAATTTGTTTGGAAAAAAAAATAGAATACCACGTTCCTTATTTTTACCAACTTAGGGACACATGAAGCTCTTTACTGTTTTTCCCAGAATTTTAAGGGGCAGATGGGAAAAGGAGATAAACATACTCCAAAGGAACATTAATTAAATAGGAAAAAAATGCTAGGCTTTTAGTCTAATCCAGTTTCACCTCCTTAGACAATTCACTGAACCACTCTGTTGTATACAATAAAGGGTGATCTCCAAAGTCTCTTCCAGCTGTACAGGTTTATGATTATTGGACAGTAATACCACTTCAGATGGAGAACTGAGCCCAGAGAAGCCTGCTATTTACACATGATTAGTGTCACATGCACATAAAAGCAGAAGCAGGATTGGATCTTGAATCTTAGAAGCTAATGGCTACTTCTAGACTTGTCACGAAGGAGACTTCCTCGGTATTGTCCATGTTTTAAAGTACCAAGTAGCTGTACCACTTGGTAGGAAACCAGGAGAAATATAAACTAATAAAAAGTGACTAGAGATTGACTTAGCAAGGCTTCAGGAAAGGGAGCTAAACCAGTGTTTATCTAACTGCATTTTGAGCTACTTGCATCAAAATCACCTGAGCCCCGTATTAAAATGCAGATTTCCGATCCTGTCCCCTAGCCATGATTATCAATCTCTGGAAGGGACTCAAAATCGGCATTTTAAACAACCCCACCAAGTGATTCTCAAGACATCCCTACAGTTTGAGAACCAATGGTATAGTAAGTAAGTGGAAAATATACAGAAAACAGATGAGGAAAGAAAAAGGCCAGATAAAGAACAAAAAGGAAACTTTAAAAATGGTAGGATGACTGAGGAAGATGCAGGATATATTAGGGCATTGTATAAATTACTATATATAAACATAAAATTTAAGCCTACAACCTGCTTGAAAAATAGCTTATTAACCTAATTCAAGAAAGCTAGAATATTTGAACGAAACCTCAAACTTCGCATCATTATTTGAAAATATGTAGGATTTACCTTCTCAGAGCAATTGTATGAGCAACATACAAATACCAGGTGATAGCATCAGCACCAATTATAAATCTATTTTTAGCCTCTCTAGGTTGATTGGTTTTGTGTTTCCTTAGTTTTTTAACTTTCTCAACTAGTTCTACTTTGTGTATACCCGTCAGTCACT EMBV3_11101 TCGTCAACAAGTTCAGTCTCGGGGTTGAGGAAGGTTCAAGTGATGAGGAGGAGCTGCCTA Gene GeneID:522603|LOC522603:XM_002707910:52_cdna Constitutive 0 NULL GeneID:522603 X GENE LOC522603 NULL similar to melanoma antigen EMBV3_07884 GTGTCTGCCCAGAGGTGAGACCTCAAGCTGACTCAGATCCTTTCTCTTAAAGTCTCTTTA Gene GeneID:514652|ISCA1:NM_001034470:5_cdna UTR3_Alt 2 NULL GeneID:514652 8 GENE ISCA1 MGC127704 iron-sulfur cluster assembly 1 homolog (S. cerevisiae) EMBV3_28985 GTTCCGATTATGGCACTTTTTGTGAAGCAGTAAAAGATAAGAAGAAAAGAACTCCTAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15827 CCCTTGGACGTCATCAAAATCCGCTTCCAGTTTTTGTCGTTTGAAGCGCTGACCGAGCTG Variant GeneID:504418|SLC25A19:NM_001045887:341_cdna 250^405 2 EMBV3_39579 GeneID:504418 19 GENE SLC25A19 MGC137486 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 EMBV3_39210 CCCCAATCTATTCGTTAGCCTCTCAGCTGGCCTCTCTTCCTTCACCAATCCTCTGAGTCA Gene BVT0102_122833 - 1 EMBV3_02936 GK000023.2:12410667-12483467 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134111 1 XLOC_081297 Coding TCONS_00134111 XLOC_081297 NonCoding Coding BTBD9 23:12457860-12462083 j TSS100037 492 0.0833333333333333 3 0.884178114637613 0.000349611135479416 2.14602885839957e-05 0 1.75224342757062e-05 0.000725206183038721 0 0 0 0.000257044550858179 0.000212195994833988 6.29713062485498e-215 0 1.2677946639607e-05 0 0.00169071995287212 0 0.000168722309070132 0 0 0 0 0 0 0 3.13715833639786e-05 0.000428364428809912 0 0 0 0 XM_003583853.2 LOC100852241 PREDICTED: Bos taurus formin-like protein 5-like (LOC100852241), 1e-28 131 100.00 0.144308943089431 XM_005248841.1 BTBD9 PREDICTED: Homo sapiens BTB (POZ) domain containing 9 (BTBD9), 2e-07 60.8 83.08 0.128048780487805 0 noncoding 0 0 0 0 0.0225912375307617 0.879430386153916 0.0225912375307617 0.879430386153916 TACGAGGAGGGTGCGGAGCGGGCGGAAGAGGCGCCCGTGCGGGCCGTGAGGTCGCAGAGGAGCATCGTGGGGTTACAGCTGCAGAGATAGTGGAAGAAGATAATCCTACCCAGAAAAGTTGAGAATGAGAACTGGAAAGAACATGGAGTGGAACTTCTGGATGGTTTCTCAAACTTGAGCATTCATCAGAAATACCTGGAGGCTTTGGACTGCACTTTGAGAACCACTGACTCAGAGGATTGGTGAAGGAAGAGAGGCCAGCTGAGAGGCTAACGAATAGATTGAGGTTGATGGAGAATTCAGAGAAAGTTTAGAGCAAAATAAGGAAGTAAGAGCCTGGAGAACCACCATTCTGCTTTCCAGTTCCATGAACTTCAACTCATTCTTATTTCTGTTTCATCCAGAATTTGGTATAATGCTTGGCACATAACATTGTTTGAACGAACCTTTGAAGCTTCTTAACAATGTCCTTATGGGTGATTGCAAGTACTA EMBV3_04877 CTGGGCACAGATGATGCGTGCTACTTGCTATTATGAGAGAAGCTTAAAAAAAAGGAAGAT Gene GeneID:509462|ZBTB43:NM_001024503:11_cdna Constitutive 1 NULL GeneID:509462 11 GENE ZBTB43 ZNF297B zinc finger and BTB domain containing 43 EMBV3_06928 GCAAACACACTCAGCTTGACACCCTGGCGGACTGATTTTAAGGGGTGTGGCAGAAGGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28006 ACTGGCCCTGATCCCAGGCATGTCCTTTCGGTTTAGAAGAGCCACAGGAAGCAGTACAAA Gene BVT0102_235083 + 0 NULL GK000025.2:41171210-41183194 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145633 TCONS_00145632 TCONS_00145637 TCONS_00145634 TCONS_00145636 1 XLOC_088887 Coding TCONS_00145637 XLOC_088887 Coding Coding GNA12 25:41159543-41173794 j TSS109092 3897 2 TCONS_00145637_1 157 3 0.726736842105263 0.00149123118625397 0.000603008670998659 0.000698410772456751 0.000580317101220497 0.000455935904309767 0.000484056226610899 0.000142160519227603 0.00045237460612273 0.000571702804621813 0.000163381246995771 0.000486226889127737 6.70798741426581e-09 2.83165559214608e-08 5.35350528078331e-05 8.04093863799368e-09 0.00197224080747837 0.00104451986733012 0.00108635047454729 0.000486661828823282 0.00114431746243015 0.000130095142414041 0.000285901302519442 9.5814828381902e-07 0.000865457959345363 0.00113897327840337 0.000543978111787314 0.000459642737742061 8.38409808867549e-05 4.70228723097586e-05 7.61023123585508e-05 XM_005225103.1 GNA12 PREDICTED: Bos taurus guanine nucleotide binding protein (G protein) alpha 12 (GNA12), transcript variant X1, mRNA. 0.0 6836 100.00 0.972286374133949 NM_001282440.1 GNA12 Homo sapiens guanine nucleotide binding protein (G protein) alpha 12 (GNA12), transcript variant 2, mRNA. 0.0 940 93.43 0.159866564023608 TCONS_00145637_1 sp|P27600|GNA12_MOUSE GNA12_MOUSE Guanine nucleotide-binding protein subunit alpha-12; 2e-109 321 98.09 0.993630573248408 2 coding 0 0 0 0 0.0967488623064561 0.38838605245132 0.0272179990004659 0.557304079259511 GGAGCATCCGGGGCTCCCCGCCTCTGGCCTTCCCGCCGGCCGCAGCCCCGGCTCCCTGTGCAGAGCTTGCCTTTTCCTGCTTCCCAGCGCCAAGCGGCGAGCCCATGGGGCGAATCGGTGAAGTACTTCCTGGATAACTTGGACCGGATTGGCCAGCTGAACTACTTCCCGAGCAAGCAGGACATCCTGCTGGCAAGGAAGGCCACCAAGGGGATCGTGGAGCACGACTTCGTCATCAAGAAGATCCCCTTCAAGATGGTGGACGTGGGCGGCCAGCGGTCCCAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGGATCACGTCCATCCTGTTCATGGTCTCGTCCAGCGAGTATGACCAGGTGCTCATGGAGGACAGGCACACCAACCGCCTGGTGGAGTCCATGAACATCTTCGAGACCATCGTCAACAACAAGCTCTTCTTCAACGTCTCCATCATCCTGTTCCTCAACAAGATGGACCTGCTGGTGGAGAAGGTGAAGACCGTCAGCATCAAGAAGCACTTCCCAGACTTCAAGGGCGACCCCCACAGGCTGGAGGACGTCCAGCGCTTCCTGGTCCAGTGTTTCGACCGGAAGAGACGGAACCGCAGCAAGCCTCTGTTCCACCACTTCACCACCGCCATCGACACCGAGAACATCCGCTTCGTGTTCCACGCCGTGAAGGACACCATCCTGCAGGAGAACCTAAAGGACATCATGCTGCAGTGACGGGCCTGCCGCGGGCCGGGCCTGCCGGGCTGTGCATGGTCCCGGCCCGGAGCCCTGGACATGCAGCTCGGGATGCGAGGCCCGCGCTCGGCTGCAGGGGGGACACGCGGATGTAGCTACTGAACCCCGGGGACTCGTGACACTACTGAAAGTCCAGCGGTCACTTTGATGTTAACGTGTGACGCCCGATAACACGCTTTCTCTCGTTACAGACACTGTTCCTTTTCTGACACAGTTCGATTGGGGACCACGTGTGATGTTAACGTGTGACGCCTGACAGCACAGCTCTCTCTTTTTACAGACACTGTTCCTTTTCTGACAGTTCGATCGGGGACCGCGTGTGATGTTAACGTGTGACGCCTGACAGCACAGCTCTCTCTTTTTACAGACACTGTTCCTTTTCTGACAGTTCGATCGGGGACCGCGTGTGTGTGTGCACGCACGCTCTGTCTTTAGTGACGGAGACGCAAACACTGACGTCTCTGCGGGTGGCTCTTCTCTCCGACTAGTGAGTCCTTGGTGGGGGCATTGCCTGGCGGGGTCCTGGGGGTTTGGAGGAGGGGAAGTGTGGGCTGAGCTCGGGGGGCCCACCACCACCTCCCCGAGGAAGCACGTTGCCTTTTCGGTCTCTGGTGCCAGTTTCCCAAGAGGCCCCGGCTGTTAGGTTGGAGGGTGGGAGTGAGAGCCCGCGGGGGACTTGCCTTAACGCCCCAACTCCTGTGCCTTCCTCCCGCCCGTCCCATCGGCCACGGCCTGCGGGGTGGGTGTGGGCCGGGCACTGCCTTGAATCCCCCTCCCCTCCGCACGGGGCCGGGGGTTGTGCCTGCTTGCCCTGTGCCCACCCCCGCCCCTCAGCAGAGCCCTCACACACCAGCTGGCCTTGCAGACTGCCCTCCATCTCCCGGTCGTCTCACACGTGCGGTCAGCTCGGGGAGCCCACCGTCTCTGGGGGAAGCCGCGTGCCCCCTCCTCTCGGGGCCCTCTGAGAGCCGGCAGCGGGGCCGCAGCACCTGCCTTAACACCGCAGGCTCCGCTGCCTCCCTAGACGGCAGGTTCTCATCACAGTCCCTCGCTTCCACTAGCACACACAGCAGAAGCACGTTGGCCCCGGCCTCCTCTGGGGGCCGCTGCGGAGGCTGAAGTGGCGACGTGCGCCGTGAGCCCAACCCTCGGGGAACGTGTCCGGCTGCCCTGCCCAGGTGTCTCACTGTGTTTAAAAATACATTGCATTCCAAACCAAACCAGTCCCTGCCGTGTGTGACTCTGCTCGACAGTGCCCGGCGCGCTGAGGCCTCGTCCAGCGTTTAAACGAGGAAAGGCTTCCTCCGCCAGCGGCCCAGCCTGTGCCTGTGGCTCAGGGGTGCGCTGCTCCCCCCCGCGTCCCAGCGGGGTCCTGCTCCCCTTCACCAGCAGAGAAACGGATCCAGCTCGTGGCAGATGCGGGCCCAGGAGGAAAGGGAGGGGCAGACCTGCTTCTGAGTCATGCTTGTTGTCCAGCGTTCGATGAGGAGATGGCCTGAAATCCTGTTTCTCTCTGGGCCCTCGAGACTTCCTGTCCATGTTTGCCGGGGTTTGGGCTCTTTTTGGCTGGAGAAAAGTTGCTGTTTTTGTACTGCTTCCTGTGGCTCTTCTAAACCGAAAGGACATGCCTGGGATCAGGGCCAGTGACCGAGGTTTAAAGGAGAAAGAACCCTCTGGATGGACTGCGTCCGGGCGTCCTGAGACCCCACCATCCTCGGGCCTCGAGCGCCCCTCGCCCGTGGCTTCCCATCGCACACGTGTGTGCGGATCCACGCTCTTCCCGCCAACCTGGAAACCCCCCGTCGCGCTGGCGGAGGCCCCGAGGTGGGTGTGGCCGGCTTGTGAACGGCTTGCTGGTGAGTTGGCGTCCGCCTGGTCAGCGAGCGCGGTTTGTCCTTCAGACGGTCAGTTGTGGCTGCCGGCTCACTCTCAGACCCGGGAGCGAGCTCGTATTGAGTGGCCATGACTGTGCTGAGTGGCCAGGGAGCCAGGGCATGGCCCAGCCCAGGCCTGACCCACTTCCTCCCCTGTGGCCAGGAGCCATCCTCGCGCTGAGCTGAGCCGGCGCAACGGCACTCAGCCCTCCGCCCCAGGATCCGTGCTCATCAGAGATAGGGTCGGCTCCGCAGGCACCACTGAAACCATCGCAGCCTTTCCACACGTAGGTTATAGTCACTTCTCTCCCAGCCTTAGGCCTTTGTATTTTAATCTCACTGTTATCCTCCATTTGCTGTCTTTTATATTGAGATGTTGGAGCAGCAGGGGATGGTCTGCCTCATCTATTATTGCAAAAATGTAACAATAAACTTCCTCTAAGCCTTCCTCCTCGCAGTCACACTGTTCACACATAAGGACACATGTGCATTTTTTTTACTATGTTTTTTTAACTTCAGTTTGTAGAGAAATTGTCTCAAAGATATTGCATTATAGCTTTGTAATTTATAGAGATCTCTAGACTCCTTATTCTTATAATTTTTTTACTTCTTTGATAAAAAAGAGTCAGGTTATTTCAACTCTTAAGATCAGGAAATCATCTTGAAACAAGATCCTTAGTTCTGACCGACTAACTCAGGCATCCTGGGAACAGACGCTCCCTGACTCGACACCATGAGCAAAAGCAGTGTCGGGACAAGAGTCATCGGAACGAATTGCTCACGGCTTACAGTATGCACAGCATTTCACCATCAGCAGGAGGGGCTGGTTTGGTGATCTGACCACCTTCGATCTCTGGATATTTATTAAAATAAATCCTTAGTTTTTCTTAATGAAAAATATCATTCAGCATTCAAAGCCAACGTGAAATTTTTCAGCCCCCAAGTTCAGAGCCCGTGGAGAACTCGAGCCCTGATGGTCCTTGAAGGTTCGCTACTTGTTGATCACAGTTCTTGTTTCCATGCTTGGGACACAAGGCGACCAGGAGAGCTGCCGCCAACACGGTTCTGTGTGGACACCTCTGGAACACGACTTCAGGACAGGGAGGGGCGGCAGGAGCACAGGCATGCATGTGTGCGAGGGAGACCCTGAGCCCACCTGCCAGCAGAGACCTGGGACGGACGTGGACGCGTCCAGAGACGGGAGGCCGGGGGAGCCCAGGGAAGGTGGGGCCCTTCTCCGCGACCCTGTGGGGTCAGCGTGCCGTCAGAAAAC EMBV3_05742 TAGGCATGTTGGCTATTGCCCTTGATGTGGCCAAGGAGCACACGTATGAGGTGGCAAGTA Gene BVT0102_108483 + 1 EMBV3_30514 GK000006.2:61357186-61362543 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205288 TCONS_00205272 TCONS_00205256 TCONS_00205285 TCONS_00205255 TCONS_00205268 TCONS_00205279 TCONS_00205273 TCONS_00205280 TCONS_00205265 TCONS_00205261 TCONS_00205266 TCONS_00205271 TCONS_00205282 TCONS_00205267 TCONS_00205287 TCONS_00205274 TCONS_00205284 TCONS_00205283 TCONS_00205270 TCONS_00205277 TCONS_00205269 TCONS_00205254 TCONS_00205278 TCONS_00205260 TCONS_00205264 TCONS_00205276 TCONS_00205281 TCONS_00205257 TCONS_00205263 TCONS_00205253 TCONS_00205275 TCONS_00205258 TCONS_00205286 TCONS_00205262 TCONS_00205259 1 XLOC_124617 Coding TCONS_00205267 XLOC_124617 Coding Coding APBB2 6:61359370-61707627 j TSS153333 6847 1 TCONS_00205267_6 757 0.0289177742076822 18 0.980390861894698 0.000960391102057574 0.000655563491708208 0.00130415842509569 0.000443403683168352 0.0012287628678411 0.00112705607389511 0.000541142778626678 0.000226632831673469 0.000613360583004105 0.00024091529598019 9.00061778315863e-05 4.2280426556727e-16 0.000203758301800921 0.000607840170625319 0.000389767656882182 0.000261004726056346 1.07639009720727e-14 5.26046037891695e-85 0.000886963689915547 0.000728635604778607 0.000186876080949036 0.000146091935922947 7.9872945108149e-05 2.14850879527921e-06 0.000479491535429866 0.000314560972709714 0.00036909550979924 5.48452778904008e-17 1.27952725876222e-42 0.000248912729054024 XM_005207864.1 APBB2 PREDICTED: Bos taurus amyloid beta (A4) precursor protein-binding, family B, member 2 (APBB2), transcript variant X9, mRNA. 0.0 1.164e+04 100.00 0.942456550314006 NM_004307.1 APBB2 Homo sapiens amyloid beta (A4) precursor protein-binding, family B, member 2 (APBB2), transcript variant 1, mRNA. 0.0 7164 83.53 0.985395063531474 TCONS_00205267_6 sp|Q92870|APBB2_HUMAN APBB2_HUMAN Amyloid beta A4 precursor protein-binding family B member 2; 0.0 1482 94.07 0.998678996036988 3 coding 0 0 0 0 -0.0180114133346195 0.900958424732234 0.0111261739362709 0.813993992562704 CTGGGCCCTGGAGTGCTTCTGCCTGCAGCTGCTCTGCAGCTCTTAGCAGTGGCTCTCCCAGTCTGTCACAGTTGGAGCTGCTGTGGGTGAGCTGCTGCCGTCTGTAGCCAAGCATGCTGTGGTTGGATCTGCCCAGCCGGGGAACAGAAATGTTTGCTGGATGGAAAATCCATAAAAGAAAGCTCCTGTGAAAGCCTGAGACAGACGATAACTTAAGCAAGATCAGATATATTTGGGCTGCCTGACCTCACTGAGTCATTGCTAGTAATTAACAGGACTTTGTGGGAAAAGGGAACTTGCCTTCTGAGCTTTGTACCAAAGACCTGGGAAAACTTAACCATCTCAGTCTTTCCTGAGTACTTGGAAACTGCCGGGGTCCCTGACAATGTGCTGACTGGTCGTCGCTATGGGCAGACGGTACCCAGAGGCTCACTGTCATCCAGGCAGCTCATATTTCAAATTATAACCTATTTCCTGCACCATTGCTGACGTCCAGAGACCCATGTCAGAAGTACTTCCAGCTGACTCAGGTGTAGACACTTTGGCAGTGTTTATGGCCAGCAGCGGAACCACGGACGTCACGAATCGGAACAGCCCAGTCACACCACCAAACACCCTCAATCTCCGGTCCTCCCACAATGAACTATTGAACGCCGAAATAAAACACACAGAAACCAAGAATAGCACACCCCCTAAATGCAGGAAAAAATATGCACTAACTAATATCCAGGCGGCCATGGGCCTCTCGGATCCAGCCGCACAGCCCCTGTTGGGAAATGGCTCTGCCAACATCAAGCTGGTGAAAAACGGGGAGAACCAGCTCCGGAAGGCCGCAGAACAAGGGCAGCAGGACCCCAACAGGAACGTCAGCCCCACCGCGGTCATCAACATCACTTCTGAGAAGTTAGAGGGTAAAGAGCCCCACCCTCGGGACTCCCCGGACTGTGAGATTTTACCCTCCCAGCCCCGGAGAACCAAGAGCTTCCTGAACTACTATGCAGACCTGGAGACCTCCACCAGGGATCTCGAGCAGAACGTGGGCAACCAGCTTGGGGCTGTGGGAGAGAAGGCCCAGCCAGGCCAGGCCTCCCCCACTGTCGGGAACGGTGATGTGCTGCTGCAGAAACCAAACAAGCCCCAGTCTAGCCCCGAGGAGGGCCACATAGCCACCGTATCATCCAGCCCAGAGACCAAGAAGGATCATCCTAAAACAGGGGCCAAAACCGATTGTGCACTCCACCGGATCCAGAACCTGGCACCAAGCGATGAGGAGTCCAGCTGGACCACTCTGTCCCAAGACAGCGCCTCCCCCAGCTCCCCCGACGAGACAGCAGATATATGGAGTGACCACTCCTTTCAGACTGATCCAGATTTGCCACCTGGCTGGAAGAGAATCAGCGACATCGCTGGGACCTATTACTGGCACATACCAACAGGGACGACTCAGTGGGAACGCCCTGTCTCCATCCCAGCAGATCTTCAGGGTTCTAGGAAAGGGTCCCTTAGTTCTGTAACGTCATCTCCCACCCCAGAGAATGAGAAACAGCCATGGAGTGATTTTGCTGTTCTGAATGGGGGAAAGATTAATAGTGACATTTGGAAGGATTTGCACGCGGCCACAGTCAACCCGGACCCCAGTTTAAAAGAGTTTGAAGGAGCCACCCTGCGCTATGCATCCTTGAAACTCAGAAATGCTCCACATGCCGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAAGCTAAGTGTTTCGCTGTGCGCTCTCTGGGGTGGGTGGAAATGGCAGAGGAGGACCTCGCTCCTGGCAAGAGTAGTGTTGCCGTCAACAACTGCATCAGGCAGCTTTCCTACTGCAAAAACGACATCCGAGATACAGTTGGCATTTGGGGAGAGGGGAAGGACATGTACCTGGTCCTGGAGAACGACACGCTGAGCCTGGTGGACCCCATGGACCGCAGCGTGCTCCACGCTCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGCGACAACGGCCGAGATTTTGCTTATGTAGCAAGGGACAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAAGCCATTGCCACAAGTCTCCACGAAATCTGTTCCAAGATTATGGCCGAACGGAAGAATGCCAAGGCCCTGGCCTGCAGCTCCTTACAGGAAAGGACCCACGGGAACCTCGACGTCCCCCTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTATTTGGGCATGCTACCAGTGGACAGACCGGTCGGAATGGATACCTTGAACAATGCCATAGAAAGTCTTATGACCTCCTCTAGCAAGGAGGAGTGGCCGTCAGTGAACATGAACGTGGCCGATGCTACTGTGACTGTCATCAGTGAGAAGAATGAAGAGGAGATCCTGGTGGAGTGTCGGGTGCGATTCCTGTCCTTCATGGGCGTCGGGAAGGACGTGCACACGTTTGCCTTCATCATGGATACTGGGAACCAGCACTTCGAGTGCCACGTTTTCTGGTGTGAGCCTAATGCCGGTAACGTGTCGGAGGCGGTGCAGGCTGCCTGCATGTTACGATACCAGAAGTGCTTGGTAGCCAGGCCACCTTCACAGAAAGTTCGACCGCCTCCCCCGCCAGCAGACTCGGTGACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAACGCCCTGTCACAGAAACACCATAGCTGCATATGCGAAAGGACTCTGTACCATTTACTGAAGGTTGAATAGCTACACTAAAGAAGAGGAGCTGATCTCTGGCCTTCCATTCAGTTGCTGATGCTTTGTCTTCAGAGAATTTATCCTTAACCAAACAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCGTGTGATATGAAAAGAAGCATGACTAATTTTTTTTGCTGTTGGTAAGTTACATCATGAGCAGTGGAAGGTCCCTTTCTTATTGTAAATATCGTAAACATTACGTAATTTCACACACACACACACACACACACACACACGGGGAAGAACGTGGCCACATCCCTCCCAGTGAAGATGCTGAATCCTTGGAGTGAATGACACCTGAGTTAGTTTCACTGTCTTCTTGACTGGATCTGTCACAAGCAACTTTTAAGTCCTACAGCACTTTGCTCTGTTTTCAGCATTGGATTAGACACTGCATACTGGATACCATTGAATTGCTATAAAAATTGGATGACGAATTTTTGTTTTAGTTTTTCATAAAATCGAACCTTTGGTTGACAAAACTGGCTGTTGGCATCAGAATAGAAACCAACTGGCAGCTTTCCTTGACGAGCTTCTTGACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATATTGGGGGGAAAAGTGAAGCTTCACAATTGAAAAGCTAAATTTCAGAAATTAAAATCGAACAAAATAGCCTTTCTGTTTAGGTGGTTTTCAAACTGATTAAGAAAAGAAAGAGATTTGCAAATCAGGATGCATTTGGGTGGGACATTATTTCAAACTTCTGCCTATATTGTACAATGCAGCTATAGAATTACAGTTCACTATGGCCATTCTCTACATAAACAACATTAAAACGAAATAGTCCTTGTAAGCCTTTCATCCTTAATTTGATAATTAGCCAATATGCAATTTGGAGTTGAGGAAATACCATTTTCTATTTTAGATCTCCACCACCATGTCATGTTGTAGTCCCCATTCTAGGTAAACGTTCTGCTAGGATTCTACATCTAGCTCAGTCTTACCCTAATGCTTTTTGCCCAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGCAACAAACTGCATTAAATTGAACCTTTCTGCATTTATGTGTTTAATATTAAAATTTGTTGAACTTTAGATATATTTTCAAATTTATATTTTTTCCATTTATCTTCAAGATTTAAGAATTTCTTATCAGAGCAAAATATACATAGGAACAATGTACTATTTAACAGGTTTCCCAAAAATAGCACTTTCCTCCTTCTTTATCAATAGACAAGAGACTTAGATGTAAAGATACACAGATTTAGACTCTTGTTGATACTGTTTAAAAGAAGTCACTAAGAAGCTAAATCTAAACATGTTTTGTTTACTCTTCAGTGATAAAAATGATCATTTTATAGCATCATCCAGTTATAAAAGCAATGCTTTATGTTTATCTACTGCTATGTACTTGTCAGAATGGTTTCCACATTTTTATCATCACATTTGAGCCTTATGAGGTAGAGAAGGTAATAAACACATTTGAGAAATAAAAAAATATGAATTACAGGGGCTCAACCACCTAGCCTAAGACCTCAGGAAAGTGAGTGAGAAAGCCAGGACTAAAACTCATCACACATCTCAACTCCCAGTTATTAAAGTTACGCTGCTTCCATGCAAGTCAGGAGGAGTCTTTTCAAACTTACTCTGAGCATATTCAGTTATTGTTGAGCAATCTTAAGATTCCCTGTATAAGCAGGGAAGTATGGCCAAATTACTTGTGCAGTAGAATTAAGTATAAAGCCAATGCCCTCTCTCAGTCCAGGACTGTTTTCCTGCATTGTGCCTCAGATGTGTTGTAAAGACAGGATTCTATGTGCAGCACAACCTGTTCAACCCACAGACTATCCAGAGATGATGTTACGTGTGGTACAAATATTCCTAATTCATGATACTTAGCCACCAGAGAACATGATGGAATGAGTAGGTGGCCTCCTGCCTCTGTTCCGTCTCAGAACTCTGGAGTTGTTTGCTAGCACCCTAGAGTTATGGCAAAAAAGATGCCACTCTAGAAATGAATTATACTTCTCACCAGCCTATATACTATTCTATGGAAGTTATCAATAACATCCTAAGAAATTACTTCATTAAAGAAATCCTTACTGTGCCCTTCAGAATTCAATCATGATGATTTTTCATCTTGACCTCCACAGTGAAACATTTTAGTGTGATAAACTTCAAAATTCTTAACTAGTGAGCCACTTTTATATTGGAAATCTCTACCAGAACCGCATTCATTTTTAAGGCATACGTTTGTTTTCAGGATCAAGAATACTGAGCTAGCTTTAAATAGCAAACTGATTTATATATGCAATTATAGGATGCATTAAGATGAATGATAGCCTTTACATACTGAAAACTTTACTGCAGATATTTTGTTTTAAAAATAGCTTTGCATAGTAAATGCAATTACTTTTGTAAAACTAATTATGTTAAGCCGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTGTGTGTGTATTTTCTGTGAAAGGATGCCAGTGTTTTACCTGATATTGTAGTGACACTTCAGTTATCTATGCATTCTTTGTATCTGTGATTCGGTAAACAGGCAGCCATGTTCACTATGCCTTGTATGTCTTATCATTTTTTTAATTAACCTGTTAAATACAGCTTAAAATATTTTTATTTTATTTATTCTATTTTTACTGAAATATACTGCATTATTGTGTTTAATGTATTATTATCTTTACTGGATATTATCTCTCAGTGTATCCAGGTCTAAGTAATCTCAGTGAACTATACATTGCCTCAAAGGTGGTTTTGTAATGATTTGTAGTCACATTTTTATTGGAATATGTAGAAGAAACGGCAAAATACTTACAAGTTTCTTTTTATTTTTTAAAAGCAGCTAGATAGACGCATACTTGCCACCTCATACGTGTGCTCCTTGGCCACATCAAGGGCAATAGCCAACATGCCTATGGCTAAAAACTTTACTTTGCAAACTTAAAGCACTGCTCGGTGCTTCATTTTTATATCCTTCACAACACGTGTGAACTCATCCAGAGACACACACATGTCCTCATGCCCTTTGTTTCCACCTGAATATATGATCAGCCATAGCTAATTGGGACCATTGTCTTTCGTTTATGTCTGTCTTACTGCATGAAGCAACACTAGACCCATTCTCATTAAAATAAGTTCTTGGTGATAAACTGTTGGCACTGCTACTTTTTAAAAAATGCCGCTTTTATGATTTTATGATGAACATTTGTACAAGTCGACACAAGGTCATTTACTAGAAGCCCTAAGTCTTTCCTCCTCTTCTTAGATGACACGCTCACTTCATAAGCATTGCAACACAAATTAAAGATTTCATTAACAATGTGAAAAACATTTCCCTAACTGATATTAGCACCACTTAACTAGTAAAAGCATTAGCTCTCTAGTTTGCCAGACTTCCTCTACCCAATACACAGCTAACATGTGTTACACAGCCTGTAAAATGAAGTTTAATTTATTTCAGCTTCAGAGAAAAGATACTGCACACATTTATCAGTGAGAGCACTCCCTGCCATCCAGAGCAGCTTGTTTATCCCAAAAGAACCTTTGGTTTTGCTTTTGGCCCCTTCTGCTGTTGACCACTTTTACACATTTTAAATGTAATATGTTGTGAGAATAAACTTAGCTGCGTAAAATGTTTGGCTCATTTATCTGACATCAGTTATACATATCCAGGCATAGCGATAAAAATCTCACGCCAGTCATTTTATTTTCAAATTATTCTTAAATTTAAAACCATTTTAGTAATGTAAGATTTTGCTTTGATTAGCTGTTGTATATTTCTACCTGGTAAGAACTAGAAAGTAACTTTAAATTTTGAATAACTCATCACACTGTCCTTATTTGTTACTCAGGAAGGACATCGGGCATTTTGGACTTGGAAGCCTAGTCACCAACTTGATGCTCGTGTATGCACTCTTTCTAGTATTAAGAGAGTCCATTTTTATTTTAAGACCCT EMBV3_38676 GAAGGCAGACGTAGAAAGCTCAGTAGACGCTACCTAGTGGGCAAATGGCAGACTCGCACT Gene BVV0102_352046 + 0 NULL GK000002.2:25599242-25646771 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29581 TTGCCTCATGTTCTTGTAAGTCATTCTTAATTGACCGATGATTGTAGACCTTGCCTGAGT Gene GeneID:537791|AEBP2:NM_001083485:44_cdna UTR3_Alt 2 NULL GeneID:537791 5 GENE AEBP2 MGC142819 AE binding protein 2 EMBV3_38584 CTTCTCCAGCTGAAAAGGACAGTCTCATCTTGGGCCAGACACCACTGTCATGTGAGGGAT Gene GeneID:789347|SPATA21:XM_002685799:690_cdna Constitutive 0 NULL GeneID:789347 2 GENE SPATA21 NULL spermatogenesis associated 21 EMBV3_09748 TACTACTTTGCCAAGCCAGGTCCACCCACACCTGCCCTCTGGCTGGTTGCTAGAGGCTTT Gene GeneID:536925|CABC1:NM_001046419:77_cdna Constitutive 0 NULL GeneID:536925 16 GENE CABC1 MGC137459 chaperone, ABC1 activity of bc1 complex homolog (S. pombe) EMBV3_15110 AACAGCTTTGACCAGTGGGGAGTGGAGCTGGGAAAGCAGCTGGCTAAGAAAATTGAACCT Gene GeneID:280808|GPI:NM_001040471:493_cdna Constitutive 1 NULL GeneID:280808 18 GENE GPI MGC127793 glucose phosphate isomerase EMBV3_27107 GTTTGGGGACATAACTAATGAGGCAGTCAGCTTTCTTGGTGAGAGTCTGCAGCGCATTGG Gene GeneID:511059|FRYL:XM_002688268:8_cdna UTR3_Alt 2 NULL GeneID:511059 6 GENE FRYL NULL FRY-like EMBV3_02932 CTGAGTGTGACAGCCACTGACAGGAGCACAGGCAAAGCTAACAAGATCACCATCACCAAT Gene GeneID:539835|HSPA6:XM_002685850:388_cdna Constitutive 0 NULL GeneID:539835 3 GENE HSPA6 NULL heat shock 70kDa protein 6 (HSP70B') EMBV3_02978 TTGACTATGTCCTCACTGACTAGCCCCATCCCTGAAAACCTGCCAGAGATCCTAGTGGCA Gene GeneID:786512|PCDHB6:XM_002689228:84_cdna Constitutive 0 NULL GeneID:786512 7 GENE PCDHB6 NULL protocadherin beta 6 EMBV3_04624 GGCCATTTTGCACCTTCTAGCCTTCGTGTGGAAGACACAGTCAGCCCAAACTCCAGATCT Gene GeneID:525199|GZF1:XM_002692163:60_cdna UTR3_Alt 2 NULL GeneID:525199 13 GENE GZF1 NULL GDNF-inducible zinc finger protein 1 EMBV3_15577 CTCACTTGCCCTGGAGCCTTTGTCAGAAACTTATGACAGCTACAATCCTCTTCCTACCAC Gene GeneID:768315|LOC768315:NM_001078130:22_cdna UTR3_Alt 2 NULL GeneID:768315 15 GENE LOC768315 MGC142663 hypothetical protein LOC768315 EMBV3_12265 TCCTGGTGGCTGCAGTCTATACCATGGGGCTCATTGGCTCAACCATAGAAATTGGCCTCA Gene GeneID:508392|LOC508392:XM_002699193:62_cdna Constitutive 0 NULL GeneID:508392 29 GENE LOC508392 NULL similar to olfactory receptor, family 8, subfamily A, member 1 EMBV3_39417 AAAGCATTATTCATTCACGGAAGCAATCGAAAACCTGCATCACGGGCTTCCCGCCTCAGG Gene GeneID:781766|LCA5L:XM_002685102:53_cdna Constitutive 1 NULL GeneID:781766 1 GENE LCA5L NULL Leber congenital amaurosis 5-like EMBV3_15749 GGCAATGCACAGAATTGTGTATGGGCACCTTCATTTGTGTTTCACCTCCTACCATGGGGG Gene GeneID:281002|AOC3:NM_181002:15_cdna Constitutive 0 NULL GeneID:281002 19 GENE AOC3 NULL amine oxidase, copper containing 3 (vascular adhesion protein 1) EMBV3_14473 CCGTGGTGGCCGACACGGGCGACTTCCACGGTCACAAGAGGAACAGATTACAAATGCTAT Variant GeneID:513453|TALDO1:NM_001035283:272_cdna 154^277 5 EMBV3_32279 GeneID:513453 29 GENE TALDO1 MGC133714 transaldolase 1 EMBV3_02824 GTTAACATGCTGAATAGTTGCTAGATGAATGCCCCAGTCCTCACTAGGTATCCTAGAAGG Gene BVV0102_449314 + 0 NULL GK000010.2:61752072-61798952 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00021500 1 XLOC_012173 NonCoding TCONS_00021500 XLOC_012173 NonCoding NonCoding - 10:61768872-61770629 - TSS15390 1757 2 TCONS_00021500_2 60 0.476949345475242 1 0 0.000573035052340222 9.72244010080175e-05 0.000553027256566511 9.4526518352145e-05 0.00011521020690065 9.77227860867206e-05 1.32765624250796e-05 5.38620212246642e-05 0.00026045909442802 0 0 0 1.63305641856948e-06 4.01593315740304e-05 0 1.50321897078263e-05 4.72459756672932e-05 0 0.000159172656478425 6.95813435452697e-05 0.000145134622198015 0.000287196630451385 0 2.8624884595751e-05 0.000110413882380821 5.21292040606487e-05 6.66949239231709e-05 0 0 0 XR_107198.1 D730002M21Rik PREDICTED: Mus musculus RIKEN cDNA D730002M21 gene (D730002M21Rik), 2e-07 62.6 85.71 0.0313033579965851 0 noncoding 0 0 0 0 -0.102174334887888 0.451767557824419 -0.011980490274526 0.865894140054207 GTGGTCCTTCATAGATAAGTTATGACTGGAGTGTAGGGTGAATTTCCAGTGGGGACAGTCATCATTACCCCAAGGTTGGAGGGAGGCAACCTGGCAAAGGAGGACAAAGCTAAACATAGGCCTCCCCGCTAGCCTTCTCTTCTGCCTTACTGCTCTGTGTCTCTTCCTCTAGACCTTCCCTCTGTGCTTTTTCCACCATCCATCCACTTTCCCACCCCTCTTCCTCTCCCTTCCTCTGCAGGTTATTCACTCAGTTCTTTTAATCTACTCTTTTCCACCTCCATCTCTTCCATCAGGCCATTCTTCTGGATTCTTTGACTAGTGCCCTTTCTTACCTTTCAAGTTTTTCTTCTTTAGTCGAAGGGCAGGAGCTGCCTGTGGTAGTGAGGGTCATGAGAAGGACATTAAGGGTCACACCAGGCTGGGTCTGAAGAGGTGACATTGAGCTGGTGTCAAAGAGGAGGTTTCAGGGTCTGGAATCAGATTGCCTTCCCTGCCTGCTCAACTGTAAGAAGTAGTGTTATCTGCCGGGGGTTCAACCAGGGAGGGAGAACCAGTAGGAAGGATAGAGAGAGAGAGAGGGAAGTAGGTAGGTAGATAGATGGATAGATATTAAGAGACTTATTACAAGGAATTTGCTTATGCAGTTGTGATGGCTAAATAAGCAGGTCCAAAGTCTGTAGGACAGGCAGTCAAGAAGAGAGGAATGCAGCTTCAGTCATTGTCTACAGGCAGAGTCTCTCTTATAAGGCCTTCCAGCCTATTAAGTTAGGCCGTCCCAGGATAATATCCCTAACTGAAAGTGATGATTTTGTGTGACTTAAAATCACTCAGATCAGCAAACTCCCTTCATAACAACACTGAAATTAGTTTTTGATTGAGTAACTGGAAGAAGGGATGTGAATGTAACAGAATGTCTGTCATTTTCTTTCCATCCTTCAACTCTTACAACAGAATATCATTTCTAGCCCACATTGTCCAGAAACATATGAGAAAGGGAATTCTGCATCATACAGTTTAACTCGAGAAAATTGAAATACTACAAAGTCATTCCAAATAGTTAACATGCTGAATAGTTGCTAGATGAATGCCCCAGTCCTCACTAGGTATCCTAGAAGGACTTGGAGCTAGTTTGCTTTTTTTTTTCTTTTGCTTTCCTGCTGCTTTTGTGGTGTCCTTAAGAAATGGCATGGGCAGAAGTAGGACATTCCTTACCCCGTCTCTGGCTTCCAGTTGGGTTTGGCCAATGGGTCGTGCTGGCAGGAGATAGGAGAGAAGAATAGCGAAGTCCAAGTGTTTAATTCCCTGGCTCCAGCCCTTGGATTATCTCAGGATGCCTGTGTCCCTGAACTAAAGGGAATACTTCCCTCAAGGCGTCCTTCTCTACACCGGCACTTCTCAAGCCGTATGTGCTGAAGGACCAGGTTTTGTTGTTTTCATTTCATCATCGACTGATCTTGTTGATCTTTTATAGTAAGATGCTATAGGCTTGTATGTCTCAGTAAAGTCAAATAGTTATAAAAGTTTTAAGCTACATTCTGTCAATTTTTGTACTCTCATTTCATTGTGGACCACTGATTTTGCACACTGGAACCTACTTACAGGCCACACTTTGAGTTGCACTGCTTTTCATGACTCTCTGGGTTGGAGTAATCTCTCCCTCCTCTCATCGCTTAAAGCTTGGGGATAGAGTCAGTCCAGTTGTTACTAGCCTTAGGGTTCCCACATTAGCTCTATGGTTACCCCACATCTACACC TCONS_00014308 TCONS_00014309 TCONS_00014312 . 3' 757 TCONS_00014308 TCONS_00014309 TCONS_00014312 . 3' 2513 EMBV3_04271 AAACACAGGAGCCGGAGCAGAAGCAAAGAGGCAAGAAGACATGAATCCAAAGATAAGTCG Variant GeneID:532701|RSRC2:NM_001102146:225_cdna 220^319 4 EMBV3_01870 GeneID:532701 17 GENE RSRC2 MGC143309 arginine/serine-rich coiled-coil 2 EMBV3_38055 TGTGGGATCTTTGTCAGGTTTTGGTATTAGGGTGATGGTGGCCTCATAGAATGAGTTTGG Gene BVT0102_102081 + 1 EMBV3_40014 GK000028.2:44776992-44819688 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007479 TCONS_00240570 TCONS_00199716 TCONS_00060450 TCONS_00152751 TCONS_00124122 TCONS_00238892 TCONS_00064860 TCONS_00233446 TCONS_00250635 TCONS_00071338 TCONS_00152649 TCONS_00224115 TCONS_00031916 TCONS_00189101 TCONS_00048823 TCONS_00063101 TCONS_00162600 TCONS_00197530 TCONS_00251536 TCONS_00115689 TCONS_00249014 TCONS_00207066 TCONS_00254141 TCONS_00060447 TCONS_00006941 TCONS_00110347 TCONS_00156993 TCONS_00040856 TCONS_00060451 TCONS_00240558 TCONS_00250238 TCONS_00206538 TCONS_00223458 TCONS_00020842 TCONS_00175068 TCONS_00250554 TCONS_00139971 TCONS_00131040 TCONS_00254568 TCONS_00007449 TCONS_00007556 TCONS_00162777 TCONS_00199737 TCONS_00152746 TCONS_00251955 TCONS_00060449 TCONS_00055445 TCONS_00218764 TCONS_00252078 TCONS_00252355 TCONS_00136862 TCONS_00063064 TCONS_00088085 TCONS_00023027 TCONS_00031937 TCONS_00250538 TCONS_00253241 TCONS_00186815 TCONS_00222771 TCONS_00197506 TCONS_00124128 TCONS_00251853 TCONS_00022022 TCONS_00185929 TCONS_00135700 TCONS_00060448 TCONS_00098584 TCONS_00078858 TCONS_00109860 TCONS_00073275 TCONS_00063165 TCONS_00218860 TCONS_00251931 TCONS_00162513 TCONS_00039852 TCONS_00233371 TCONS_00022063 TCONS_00056147 TCONS_00233374 TCONS_00060446 TCONS_00206627 TCONS_00166316 TCONS_00130237 TCONS_00206425 TCONS_00080323 TCONS_00040696 TCONS_00252935 TCONS_00207276 TCONS_00250666 TCONS_00206407 TCONS_00037883 87 XLOC_003040 XLOC_147234 XLOC_121368 XLOC_036736 XLOC_092516 XLOC_075674 XLOC_145558 XLOC_039584 XLOC_142928 XLOC_153578 XLOC_043109 XLOC_092414 XLOC_137411 XLOC_018161 XLOC_115140 XLOC_028954 XLOC_037828 XLOC_099481 XLOC_119191 XLOC_154477 XLOC_069858 XLOC_151957 XLOC_125585 XLOC_157079 XLOC_002503 XLOC_066251 XLOC_095453 XLOC_024670 XLOC_147222 XLOC_153181 XLOC_125060 XLOC_136758 XLOC_011517 XLOC_104851 XLOC_153497 XLOC_085033 XLOC_079745 XLOC_157500 XLOC_003010 XLOC_003117 XLOC_099658 XLOC_121389 XLOC_092511 XLOC_154896 XLOC_033253 XLOC_132083 XLOC_155019 XLOC_155296 XLOC_083073 XLOC_037791 XLOC_052872 XLOC_013697 XLOC_018182 XLOC_153481 XLOC_156182 XLOC_112866 XLOC_136078 XLOC_119167 XLOC_075680 XLOC_154794 XLOC_012693 XLOC_111982 XLOC_081923 XLOC_058829 XLOC_047743 XLOC_065764 XLOC_045040 XLOC_037892 XLOC_132179 XLOC_154872 XLOC_099394 XLOC_023669 XLOC_142853 XLOC_012734 XLOC_033950 XLOC_142856 XLOC_125149 XLOC_101154 XLOC_078948 XLOC_124947 XLOC_049207 XLOC_024512 XLOC_155876 XLOC_125794 XLOC_153609 XLOC_124929 XLOC_021712 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_06581 TCTTTGGCATTATTGGGAATGAAAACTTTCCAAGTTCAATGTTATTGAGAGTTCCCCCAA Gene BVV0101_058940 + 1 EMBV3_24015 GK000010.2:76928760-76943980 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04185 ACAGGTGTGGACGACACTGTCACTGTGATACTCCAACACGGTGTCCGTGAGTGGTACCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38187 AACATCGTGATGCTCTTGAAGGCCAAGCCCGAGGACTACAGACAGGTCAGCAAAGGCCTG Gene GeneID:504790|COG7:NM_001083372:311_cdna Constitutive 0 NULL GeneID:504790 25 GENE COG7 NULL component of oligomeric golgi complex 7 EMBV3_10561 CATTATTTGAGGTCGGGGAAGGTGGGGGAGAGAATGAGTTTTAAGTGCCTGTGGGATATC Gene BVT0102_219812 + 0 NULL GK000003.2:8360653-8381845 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168302 1 XLOC_103053 Coding TCONS_00168302 XLOC_103053 Coding Coding DEDD 3:8380629-8392717 j TSS126240 2790 1 TCONS_00168302_4 318 5 0.769587159758418 4.34089166725605e-29 0.000644684167737434 1.71993668392947e-43 5.09886134370291e-42 5.52438047368295e-62 8.99653293749008e-43 3.22570144822252e-57 1.17020648517957e-138 7.71667771121773e-38 1.03732129755264e-60 0.000297878288346287 0 6.11294415409451e-05 4.0764877667424e-70 1.48055828549559e-70 0 1.9216527546347e-194 0.000329319532559887 4.15891474694103e-49 4.13988401941366e-52 2.80343349617837e-66 5.62186053855089e-05 0.000442818041958849 0 1.31314555137917e-42 9.58121303494313e-74 2.24486606745826e-51 3.48420289817876e-05 1.7093373318539e-36 0 XM_005203535.1 DEDD PREDICTED: Bos taurus death effector domain containing (DEDD), 0.0 3323 100.00 0.659856630824373 NM_032998.2 DEDD Homo sapiens death effector domain containing (DEDD), transcript 0.0 3041 90.47 0.794982078853047 TCONS_00168302_4 sp|O75618|DEDD_HUMAN DEDD_HUMAN Death effector domain-containing protein; 0.0 649 98.74 0.99685534591195 1 coding 1 1 1 1 -0.0768261070020832 0.544108831925761 -0.00220583818643118 0.963984128735288 TTTCCTTTTGGACTCCCAACCCACATTATGTAACATTCCATTGTCTAACGGATATCCCACAGGCACTTAAAACTCATTCTCTCCCCCACCTTCCCCGACCTCAAATAATGAAAATGGCATCATTAGTCCCTAGGTGCCTAAGCCAGAACACCGAGAAAAACCTTGGATTCCTCCCTCGGCCTCATATCCATTTCCGATCATTCCCACCCTCCCCCGCCACCATCGGTACACACCCTTTTACAGGCCAGACCACTGTGATCTCTCTTCGGGATAAGAGCGTCCTAACCGTTCTTGGGTCTAACTTCGCCCCCTCCAATTCATTCTACCCATTGCTACCCCTGATCTTTTAAAATGCAAATGTATTTGTTTACACCTCAGCTAAGACTCTTCAAAACCTATTCATTATCCTTAGGAAAATAATTTACGTGGCCTTGCGTAAACTAGCCCCTCCCAACCTCACAGAACTCATCTATTTACCCCTCTTTAGCCATACCATACTGCTGGCAGCTCCAGAAGGTACCCAGTCTCCCACCCCCAATTCCCAACAGTCCAGGATTCAGCTCAGTATAGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGCACTGTGTACCTGAGCCCCCAGCATGGCGGGCCTAAAGCGGAGGGCAAGCCAGGTGTGGCCCGAAGAGCACGGTGAGCAGGAGCACGGGCTGTACAGCCTGCACCGCATGTTTGACATCGTGGGCACCCACCTGACACACAGAGACGTGCGTGTTCTTTCCTTCCTCTTTGTTGACGTCATTGATGACCACGAGCGTGGCCTCATCCGAAATGGACGTGACTTCTTACTGGCGCTGGAGCGCCAGGGCCGCTGTGATGAGAGTAACTTCCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCATGACCTGCTGCCCTACGTCACTCTCAAGCGGAGACGGGCTGTGTGCCCTGATCTTGTAGACAAATACCTGGAGGAGACATCAGTTCGCTATGTGACACCCAGAGCCCTCAGCGACCCAGAACCGAGGCCTCCCCACCCCCCTAAAACAGTGCCTCCCCACTATCCTGTGGTGTGCTGCCCTGCTTCGGGCCCTCAGATGTGTAGCAAGCGGCCAGCTCGAGGGAGAGCCACACTTGGGAGCCAGCGGAAACGCCGGAAGTCAGTGACACCAGATCCCAAGGAGAAGCAGACATGCGACATCAGACTGCGGGTTCGGGCTGAATACTGCCAGCATGAGACTGCTCTGCAGGGCAACGTCTTTTCTAACAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACACCATCCTCAAGTCCCGGGACCTGGGCTCCATCATCTGTGACATCAAGTTCTCTGAGCTCACCTACCTCGATGCATTCTGGCGCGACTACATCAATGGCTCGTTACTAGAGGCACTTAAAGGTGTCTTTATCACAGACTCCCTCAAGCAGGCTGTGGGCCACGAAGCCATTAAGCTGCTGGTGAATGTGGACGAGGAGGACTATGAGCTGGGCCGACAGAAACTCCTGAGGAACTTGATGCTGCAAGCATTGCCCTGACCTTTTTCCCCTTCTCACTTCTCTGGGGACTTCTCACCGCCCACCTCTGGAGCTTACATACTGTTCTGGGGTTTGTTCTCTACCCTTCCAACCAATCACACCCCTGCCTTTTTTTTTTTTTTTAAAGGAAAAGACAAAAGAAAAATGGAAGTGGTGTCCCCCACCCCTCCCTGCACCCATGTGCCTGGCTTCCCTTTGTTCCTTTTCCACTTACCCCCTCATTGTGTCTCTACAGTCACCTTGCCACTGAGCCGTAAGAAATGTGTAGGGAGAAGCAAAGTCTATAGGTCATAGTCTTTGTAAGGGATTGAAGTGATCACTGCTTTTGGGGTGCATTGAGGGGTTGTCAGTACTTCTGGCTTTATGAGGGCTCTTAAACTTTGTCTGAAAAACCAAAGGGCTGTCAGTAGGGAGCTGTGTGGTAGGTGGGACTCTGAAGTGTATTTTGGAAATTAATCACCACCCTCTCCCAAATTATAGAATTTTTAAAAAACAAAGAAGCTGTGGCCCTTTCCACTCTCTCCTGGCCTCTGGTGCTGCTCCTCTCTGCCTCGTTTCCTCCATTCCATGGCTTGAAACCTCTGCCTGGTGTGGCTCCTTCCTTTTCCCTCTCTGTCAAACTCTCTTCAAAGGAATAATAGGTAAGAGGACTAGGTCAGCCTAGTCAGTCCCAACTGTGGTGTGTGCGCACACACACACACACACACAGGGTGGATGGAGAAGCGGTTGCTGGTTAGAATACACTCCCCCTGAAAAGGGGAAGGGGGAGTGTGACACTTTCTTTCCATGTTCAAGTGAAAATAAATAATGTACCCTGCAGCCCTTTCCCCTTTTGCTTTCTTCTGGCTTGGGCAAAGGGCATCACAGGTGAGAGTGAAGTGATGCGGTAGCAATGCCTCTCTTCCTTGTCTTTCCCCATCCTCTACCCTCACTCCCACTCCCAAGTTTGGGAGCGTGGGGCTGGGACATGCACTGAGTGTTGCACTTTTCTTTAGGTAGGGAGGCATGTTGAATAAGCCAGGAGGCCTAGAACTGGAGCCTAGTCCAGCTGGTACAATACCACCTCCCCTTTCAGCTCCCAAAAGAGATATTCAGACACAGACTTTATGATGATTATATATTTTTTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACAGTGACTATATTAAATTCCACCT EMBV3_19938 CCCGCCGCAACCATGCCCAAGTCCCAGTCTCTGCTGCACGTCAACGACGACCTCAACAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31750 TCAGATACTTCACATCCAATCCAGCCTCAACCAATATGTATGTCTTGTGGAGCTTCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42408 GTGTCTCGTCAGTTATTCTTAACTTCTGAAATTCTTGGTCGAAATGGAACATAATGTCTC Gene BVV0101_018796 + 0 NULL GK000024.2:37474496-37496730 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21701 CTTTAACGCAGTTCCCGCCATCGCAGTCAGAGGAAAAGAGCAGTGGGTTCCGGTTGAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37496 AGACGTTCACCTTGTCCACCATCAAGACACTCGAGGAGGCTGTGGGCAATATCGTCAAGT Gene GeneID:338055|COPG:NM_001037815:2_cdna Constitutive 0 NULL GeneID:338055 22 GENE COPG COPG2 MGC134159 coatomer protein complex, subunit gamma EMBV3_02311 CCTGCGTTATCCTCCTCTCTCATTTGTATACACTGTAATGTTGGCACAGCACATTACCGC Gene BVT0102_297758 + 0 NULL GK000005.2:95727673-95800947 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192871 TCONS_00192878 TCONS_00195962 TCONS_00192872 TCONS_00195959 TCONS_00195957 TCONS_00195958 TCONS_00195960 TCONS_00195955 TCONS_00192876 TCONS_00192870 TCONS_00195956 TCONS_00192877 TCONS_00195961 2 XLOC_117299 XLOC_118184 Coding TCONS_00195960 XLOC_118184 Coding Coding ATF7IP 5:95796119-95912282 j TSS145906 7534 2 TCONS_00195960_2 385 15 0.93527143127701 9.77879209827992e-07 0.000105415263073386 0.000135035800904629 0.000155916187261343 0.000121503635700355 2.79207240231372e-57 6.9656467981479e-05 9.87748531789902e-05 0.00026663093829042 4.41642860972556e-05 3.67213906827862e-63 7.83173800919855e-05 4.14974016746178e-56 8.21569347928704e-05 0.000455101247261178 1.47908178557577e-12 0.000187451444654199 0.00261549349627066 0.000339070694540423 0.000125933822701991 5.77074273272841e-14 3.54855773525563e-05 0.000596070930318816 0.00083756110507138 0.000169709265645041 2.77618131073968e-33 9.51613614094956e-05 0.000242606081042507 0.000223179270365062 0.000396348902593405 NM_001102325.2 ATF7IP Bos taurus activating transcription factor 7 interacting protein (ATF7IP), mRNA. 0.0 2233 100.00 0.16418900982214 XM_005253423.1 ATF7IP PREDICTED: Homo sapiens activating transcription factor 7 interacting protein (ATF7IP), transcript variant X1, mRNA. 0.0 2190 76.44 0.407087868330236 TCONS_00195960_2 sp|Q6VMQ6|MCAF1_HUMAN MCAF1_HUMAN Activating transcription factor 7-interacting protein 1; 0.0 686 92.25 0.968831168831169 0 coding 0 0 0 0 -0.0886626846362255 0.409525819435624 0.0371725209504011 0.521412121812474 GCGGGTTTGTTTTTGAATCTGCGGAGGCGGCGGCGGAGGCAGCGGCGGCGCGGCGAGTGGGGAGCGCGAGACTGAGGCGGCAGCGGTGGGGACGGCTGCGCGGGACGACTCTTTAGGACGGAACTTGGTTCCTCCAGCCTCATCTCCCGCCCCGAAAGAACAAGTAGAAAGCAATGAAAAGGACAGCAAACCTGAGGAGGAAGAGCAAGTAATACGTGAAGATGAAAGACCTTCTGAGAAAAGTGAATTCTTTAGAAGAAAACGTTCTAAGTCAGAGGACATGGACAATATACAGTCCAAACGCCGTCGATATTTGGAAGAGGAATATGAGGCAGAATTTCAAGTAAAGATTACAGCCAAAGGAGATATAAACCAGAAGCTACAAAAGGTTGTACAGTGGTTACTGGAAGAAAAATTGTGTGCACTGCAGTGTGCTGTATTTGATAAGACATTGGCAGAATTGAAAACACGAGTGGAAAAGATTGAGTGTAACAAGAGGCATAAAACAGTTCTTGCTGAACTACAGGCCAAGATAGCCAGGTTAACCAAACGCTTTGGAGCAGCCAAAGAAGATCTTAAGAAAAGACAAGAAAACCCACCAAACCCACCTGTATCACCAGGAAAGTCTGTAGTTGATGTCATCAGCAATAACAGTGTGCCCTACAGAAATACAAACACGGTGAGACAGATGTTGGAGTCCAAAAGAAATATAAGTGAGAGTGCACCACCATCTTTTCAAACCCCTGTGAATACAGTATCTTCAACCAATCTTGTCACTCCTCCAACGGTTGTCAGTAGTCAACCTAAATTGCAGCCTCCAGTGACTTCAGGTTCTCTGACAGCCACGTCAGTTCTTCCTGCACCCAACACAGCTACAGTAGTTGCTTCTACTCAGGTGCCTAGTGGAAATCCCCAACCTACAATCTCTTTACAGTCTTTACCAGTGATTTTACATGTACCTGTTGCTGTATCCTCCCAGCCTCAGCTCCTCCAGAGCCATCCAGGGACTTTAGTGACCAATCAACCATCAGGCAACGTTGAATTCATTTCTGTACAAAGCCCACCTACAGTGAGTGGTCTTACCAAAAATCCAGTGTCTTTGCCATCTTTGCCAAACCCCACGAAACCAAACAACGTTCCTTCTGTGCCCAGTCCTAGTATTCAAAGGAATTCTCCTGCCAGTGCTGCACCGTTAGGAACAACACTTGCTGTACAGGCCGTTCCAACAGCACACTCTATTGTACAAGCCACCAGGACTTCTTTACCTACAGTAGGCCCATCAGGACTCTATAGTCCGTCAAATAATCGAGGTCCTATACAGATGAAAATTCCAATTTCTGCTTTTAGTACTTCATCTCCTGCAGAACAGAGCAGCACTACCACCACAAGAATTGTTATTCAGCACCTACCAAGGTACACTACTAGCACACGCCTGTGAAACGCACATGCACGTAATGCATATCCGCTCTGTGATGCTCGTGATGTCCTGTGCACATACACGCATCCGTTTTTTGATGCTGAAAACCAGACAAACAAAACAGTAGATGCTTCTGTTAATAAGAAAGCAGCCGATAGCACATCACAGAGTGGAAAAGCCACAAGCAACGATTCAGGTGGCGTCATTGATCTCACAATGGATGATGAAGAGAGTGGAGCTTTACAAGACCCTAAAAAGGTAAATCATACCGCTGTGTCAACCATGAGTTCTTCTCAGGCTTTATCTCGACCGTTGCAACCCATCCAGCCAGCACCACCTCTTCAACCATCTGGAGTGCCAACAAGTGGACCATCTCAGACAACCATACACTTGCTACCGACAGCTCCAACCACCGTGAATGTAACACATCGTCCAGTGACTCAGGTGACCACGAGACTCCCTGTACCGAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACCCTGCCCGCACCACCAGCTCAGGCTCCCCTTCGAGGGACTGTTATGCAGGCTCCTGCTGTTCGGCAGGTCAATCCCCAAAACAGTGTTACAGTCCGAGTGCCTCAAGCAACTACATATGTTGTAAACAATGGATTAACCCTGGGATCAACGGGACCTCAGCTCACAGTGCATCACCGACCACCACAAGTGCATACTGAGCCCCCACGCCCTGTGCACCCGGCACCCTTACCAGAAGCCCCACAACCACAGCGTCTGCCCCCTGAAGCTGCCAGCACGTCTCTGCCTCAGAAGCCTCACTTGAAGTTAGCACGAGTTCAGAGTCAAAATGGCATTGTACTGTCCTGGAGTGTTCTGGAGGTGGACAGAAGCTGCGCCACTGTTGACAGCTACCACCTGTACGCTTACCACGAGGAACCCAGTGCCACTGTACCCTCACAGTGGAAGAAGATTGGCGAAGTCAAGGCACTTCCCTTGCCCATGGCATGCACTCTCACCCAGTTCGTGTCTGGCAGCAAATACTACTTTGCAGTACGAGCCAAGGATATTTATGGGCGTTTTGGACCTTTCTGTGATCCTCAGTCAACAGATGTGATCTCTTCTTCGCAGAGCAGTTAAACCTTGGAGCCTTTCCCTCTTCCTCTTTCAGAAGTTCTACTTTTTGGTCTTGTTTTAATCTTGTGCATGATACCCATTGTAAAATGCACATTGTGCAAGATTTCTTGGACCGATGTGTATATACACTACATTTGTTTATAATCAGAATAAACTCAGCCCATAAAGCAGAATCTTTTCCTGAACAATTCAGGCTTCAAGGTTTTGAAATACAAATGTGCACCTTGCTTTAGTTTTGAGGCTGGAGTATATGTGTGGTGTGTGCTTTTCTGTATTTATATGTTTATTACAGTGGAATCTCCCATTTTCATTCTCAAATTTACCTCTCTTCCAGTGTGAAGCAAGTAGATCAAAGGATTTGAGGTATGTATCTGGCATGATTCTGCTTCTACGTGATTTGTAGGTTTATAGATAGATGATTTAAACTGACTCTAAATGGAACCCAAAGAAAAAGTAAAAAGCAAAATGGTCAAATAGTTTAAAAAGGTTAATCTGAACACAGGAAAAGATCTTTTCATGTTTTCTTTTGTCTTTTCTGGGTTGTCAATTCAATGAAAAAGAATTGCAGTGGGCCCTCCCTTTTCTAATCTGAGATTTTTTCCATTTATTTTTGTGCCTTAAAGATTAACTGCAAAAGTAAACAGGGCCGTTTTTCCATTGTGGTTTACTCTTCTCTGTCAACCTTTCATCCTCATTTCTCCTTTTTCTCCACCAAATGTAGCACATTTCCCTCAAGTAAATTATAAACCAAGGCTTTTATATGTAGTCTGATCAGTGACATCATTACATTTAACTTTCTCTTTTCTTCCAAGAAAATTAATGCTCTTTATTTCTGGTCACTATTTAACTCTGTAAAATGAACCAAAAGAAGACCACATTTATATGAGCCAATTTCCCTTCAAACATATTTTAGTATCTATGTTGCACACTGTCTTAGAGATTATGAAAACAATTCTGGTTCACCTTATCACCCATAGTATTCTTTCAAAGAAAGTAAATAGTAAAATTCACAAAATACAGTAAGCTAAACTATCAAAGGGAAAGCTCCATTTCTTCTTTATCCTCATATCATTCTTCCTATATTATTAATCTTTTCTTTTGATGGTGCTAAATTTTATCTGATTCAACACATGTCAGCTGTGGATAAGGTTTAAAGTATATCCTTTGGGGTCATTTATGTAAGAATGACTTTACAACTTCTGTGCATCTCTGTTCCTCTTCAAAGTTTTAATCAAACTTTGATTATGGATTTTCTATTTGAGTGCCAGTTATACTGGTATCAGGTACGTGTTGGAGTGTAGGTAGCTCAAGACAGGAGAGATGGCGTAATTTGGGGGATAAGAGGGGTTGGCGATACTTGGAAAGGAATTTGTGGAGTTTGTGGAATACATTTTCAAGCCATCTTCCATATCATATTTGAAATCATATTCCTGCCTTCTTAAATGAGTTAAGTCATTAATGTATTCTGGACTTATAAGAGGGAACTGTCATTTCCATATTAATGCTTCTTGGTTTGCAACTTCAATGGCTTATAATAGGAAACATTCTACTTGTAAAGAAACTCTCTTTAGAGACTTTTACTGGTCACTGTACTGTCAGGTTGGATGTGAAGTTTGATTGATGTGGAAGAAAGCCTACAGATTGCCAAAAGTAAATGCTCCAAAATCTTCCTTTTGCTTTCAGAAAATAGGCCACAATGAGAATTAAAATTTCCATGAGTCATATTTGCCAACCAACTATGTAGGCATTACTCATTGTGGGTCTAATGATGATGGTAAAGAAATTGCCAATGTCATGCCAATGAAAATTTTTAAAGGGAGAAATTGATGATCTTCTAGATGTATGTGAGCACCTGTCTTATATCTGCATGTACATATGTTTTTACCTGCAGTGGTTGCAGTGTTGATTATGTGTTGAAGAGCATTTCAGTTGACAGAATAGAAAGCCCATGTTCAAAATTGTTCTTTATTGACCGGTTTTATGGTCATATGATAATTTGCTTACCTAGCCTAGAAAGCTTCCCTTGGTGAGTACTTTATGTTTACTAATCCTTTTTTTTTTTTTTAAAGAAAAAGCTTTCATAGCATTATATAATCAGGTGAAGAAAGCCCAGTAGAATGAAAATATTATTTTGACCTATACTGTGTGATTTCTGTCAGAGAAAAAAGAAATAAATAGTAACCCTAAAAAATAGATTTACTACAGTAAAATAAAACTTTTTATTCCATGTAGTGGAGGGAAGGTACAAAGAGAGATTGTAATTATTTGAGGGAAAAGATATTATAAGATGGTTTCTTTCAATTAGCCTGCCACAGAATTTATAGGCAACAACTATATTGGAGTTACCAATGGGTGCTAGACTTGAACTCTAGGTTTTTATTTCAGGCAGGTTTTATAATGTTGAAGAGAGCTTTCTGTTTGGTTGTTTCTTTAGAGACAGAGAATGGAGGACTCAACTAGAAACAGCTACTGGTCACATAATTTTTAATAGCAATCACACTTCATGGTACCTTTTTTAATTTCACAGTATCTTTTCACAGAGTATTACAAATAAGCTTAATAATCCCACTTTGGGAATGCGAGTTTGCTACCTTTTTAGTCTGACAATACTTGTGTAAGTATTGCCTTATTGGAAATCCTGGAAACTTCTGATACTTCAACCTGAAATAGAGGATGTTTATATGATGTTTAAAGGTAATGGTGATGTTTGTTACTGTCTACTTTGTACTTTGTCAGAGTAATTTTCACCCAATTTTAAGTGTGAGCAAGCCTCACATTTTAAAATTATAGTCTTGCCAGTACATTTATAAAGTACATACAAAGACATCTGTTGGTAACAGGTAACTTTATGAGGTAACTATATCCCTCTATTTCTCTGGACTCACTTTTTAAAACATGCAGAATACTGTGTGCTATTTAACAAAGTGGAAGTTGACGAGAGAAGTGAAGAGCAGAGCTTGCTTCCTTGAAAAGTGAATGTTTGTTGGGATGCCATTTGCCTCACAGACATGTGTTCCCCACTGTCCCAACCCCCATTGCCAGATAAGAAATGAAAAGTTTGATTGAATAAAATGACCTCAAACAAGGAGCTTAGGACCACCTGTCAGCAGAACTCCCTAGGCAGGCTGCACCATACAATTCTCTTCCTGTAGCCAATAAGTGTTAACGTGGTTTTTTTGTTTGTTTGCTCTTTTGCTTGTATTTTCCAAATTATTGTTCATGCAGCAAGGTGTTAATATTGCATGATATGCATTTATCTTGTTCCACAAATTTTCCAGTACTGTACAAGATTAACAGAATAATACCTGCGTTATCCTCCTCTCTCATTTGTATACACTGTAATGTTGGCACAGCACATTACCGCAAAGACTTCCAAGTGTTCTCCTAGACTTTCTTTGTTGGGCTATTTCAATATCCTGTGATTTATTCATTATTTTAACTTGATCATTGACCAGTCATTGGCCTGTTTTATTCTGATTTCCAGAAAGACCATGTCCCAGTATTAGATTATTGCAAATAACTCTATTTAAAACCAATGTATAATTGTGCCTGCCTTATTCTCTACTGGGTAAATGATGGCCCCTCCCCTTTCTGAAAATTTTGGGACAAACAAAAAAGGTTAGAACAATTCCTGTAAAGTGTTTCATTAGTGTGGCAGGTTTATCCAATTCCAAAAACTTACTTCCCTTGAGCCAGCCAGTGGGGAGGAATAGAACGATACAAACACGTGTTTTGTCTTCTCATCTTCAGTTTCATCATGCTAAGTTTGTCATTCTTTTTTTTTTACTTGTAGAGTCAAATACCCACCCTTTATATTTAATTGCTACCTTAAAATTTTTTTTTTTTTTTGTAAATAAGGCAACTGGGCAATCAAACATCATTTGGGGAATCCTGGCTTTAGAATTTTATCAGCCATTTCAAAATTAAGTATAAAAATAATTCCTTTGTAGGAAACTTGCATCCTAATATTTCTTTATTACAGTTGAAAGTGTAAATAATGACAATGTAAGACCTTCCGATGTCTAATAGAAACTGGGCTGTAGCAAGTTGCCCTATTTTTATTAGGTTTTGAAGGTTTTTGTGGGTTTGTTTTTTTTTTTTTTTTTCTTCTTTTTTAAATGTACAGTAAAGTGGTGTCTGTATAAGTGTTAACTGTAGTGGGATTTTGTCCAGCAAGCCTGAAATTTATACTTTGAAATAAACTACTGGGTTTTTAACATTCTGAGTACTCTGATTCATTCTGTTATCCTCAGACCTTATGAGTATTGTTTTCTTTTGTGAGTCTCTCACCTTGTTAAGAGTCACTGTTAGACCGTTCAGTATGGTTTACTTAATTTGACAACACTGTGGCCCTCAAACAACATATAATCCTCCAGCTTTGAAAGAAATGTTGTTAGGCAGAGCTGCTGCTAGGTTAGATAAACTGTTTTTAACTAATAGGTAACAACATTAAAGTCTGCTGTATTGTGTATGTACACCAGAGAAAGACTTCGACTGTTGCTTGTTAATGACCAGAAAAAAACAAAAACGTACTAACTGCATTTCTCTTGGAGGTTCCACCATCCCCTAGGGCTTTGTCATGAAAACCATCCAGCAAGGAGAAAGGGAAAGAGCATGAGGGAGTCAGGGTCTGAGGAGCCGGGGCCTGGGAGCAGCACTCAACTCGGAGTCCCCCCAAGGACTCTGTCACATGGCATAGCTGCCCAGGGGAAGTGGGAGGTGCGGCCTGTGCAGCCAGGCATACATGGAGACAGTGGATCTCGGGGCGAGGGAGCAGTTTCTACATACTTTCTGGTGTATAAGCTTGTGTGCTGAAATGGCATTGTTTACTTATCATATGTTTCTTGTATGGTGCCCCACCCAATTGTAGGCGCTTGTTTTAAAAATGACAAAATCAGCAGCAGAAAATGAAAGTGATAGACTGAATTGAATATATTTCATTAAAACTAATTCTGAATGGAAAAACAGCTAAAATAGTGCCTTTGGTATCTTCCTTGCAGC EMBV3_34624 AAGAATGGGGATGTGGTGGACAAGTTTGTGGGGATCAAGGATGAAGACCAGCTAGAGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07432 TTTCCTGCCAAACAAGTGGATAATCGGATGCTAGCAGTATTCTCCCGCTTCCAGTCCTGG Gene GeneID:282325|PRKCB:NM_174587:291_cdna Constitutive 0 NULL GeneID:282325 25 GENE PRKCB PRKCB1 protein kinase C, beta EMBV3_35154 GCCCTGATCCTGCCGCCCCTGGTTGAAATTCTCACGTTCTCTAAGGAGCACTACAGTATA Gene GeneID:616864|SLC36A4:XM_002698995:32_cdna Constitutive 0 NULL GeneID:616864 29 GENE SLC36A4 NULL solute carrier family 36 (proton/amino acid symporter), member 4 EMBV3_39231 TGATCCGGAACACACCCCTGTACTTTGCTGATAAACTTCATCAAGCCCTCCAGGAGACTG Gene GeneID:528055|ANXA9:NM_001035373:118_cdna Constitutive 1 NULL GeneID:528055 3 GENE ANXA9 MGC128219 annexin A9 EMBV3_12046 GCTTTCCTTTATCAACCATAAAGGGCCATTCACAGAAGGCATCTTCAGAAAATCAGGCAG Gene GeneID:100337165|LOC100337165:XM_002688040:5_cdna Constitutive 0 NULL GeneID:100337165 6 GENE LOC100337165 NULL T-cell activation Rho GTPase-activating protein-like EMBV3_35629 CTGTGTGATTTCAGATGAAGATGCGGCAAGCTGTCATGTCTGGGGTTGAGAAGGATCTCC Gene GeneID:521175|GAN:NM_001099015:47_cdna Constitutive 1 NULL GeneID:521175 18 GENE GAN MGC148817 gigaxonin EMBV3_11347 TACTCTAGGAGGAGAGAAGCAGACGATGAGCCCAGAAGGCTCTTTGTTCTGGATAAACCC Variant GeneID:281780|GGTA1:NM_177511:24_cdna 462^550 6 EMBV3_34746 GeneID:281780 11 GENE GGTA1 NULL alpha-galactosyltransferase 1 (glycoprotein) EMBV3_16466 TGGTGCGCCTCCAGCTGTGGGATATTGCAGTGTGATCTATCCCCTTGGGCAGTGAGCCGA Variant GeneID:539000|RAB7L1:NM_001099094:91_cdna 509^690 4 EMBV3_25594 GeneID:539000 16 GENE RAB7L1 MGC148495 RAB7, member RAS oncogene family-like 1 EMBV3_19751 TTCTCTATCAGCGAATCAATGCCTACAGTTCTTATGTACCACTGCACAGCTAGACACTCC Gene BVT0102_003301 + 0 NULL GK000007.2:75043970-75103432 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217759 TCONS_00217757 TCONS_00217754 TCONS_00217760 TCONS_00217758 TCONS_00217755 TCONS_00217753 TCONS_00217756 1 XLOC_131570 Coding TCONS_00217760 XLOC_131570 Coding Coding GABRB2 7:75098722-75551743 j TSS162085 6446 1 TCONS_00217760_5 481 0.0231151101458269 11 0.985795329124542 0.000684273814993302 0.000365507360090603 0.000497451380668878 1.66996117882188e-11 0.000438629713429302 5.03551390703087e-08 0.000153379335693938 0.000241093066596814 0.000381428274621739 3.08884677639093e-05 2.15486153345154e-08 8.71801298252069e-57 4.69089419608484e-05 4.39508138705038e-12 0.000126725030066583 1.61182689278179e-14 3.42483335071103e-13 1.31200936884213e-12 0.000295798389686748 0.000453450170405725 3.34773442003498e-42 0 4.13491309678367e-16 5.63006507370801e-14 0.000506891835520271 0.000628109244887251 0.000120212878365459 5.06920489560084e-08 7.66327242431172e-33 2.03251153895356e-13 XM_005209699.1 GABRB2 PREDICTED: Bos taurus gamma-aminobutyric acid (GABA) A receptor, beta 2 (GABRB2), transcript variant X1, mRNA. 0.0 9124 100.00 0.78467266521874 NM_000813.2 GABRB2 Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 2 (GABRB2), transcript variant 2, mRNA. 0.0 6358 82.10 0.973316785603475 TCONS_00217760_5 sp|P0C2W5|GBRB2_BOVIN GBRB2_BOVIN Gamma-aminobutyric acid receptor subunit beta-2; 0.0 913 95.41 0.993762993762994 2 coding 0 0 0 0 -0.108766560537735 0.582455320673935 -0.00320273213414848 0.965867420275671 CTCTCCTGGTCTCCCTGGTAACAGATGAGTCCACCTGATATCAATTACCCTTGTTACTTCTAACCTCCCCCTTCCCCTGGAACCAAAGACTGATGCCAAGACCTACCCATCTTTGTTACACATGGTGGGGTGTCACTTTAGGACCTTGCTTCAGAACAGCAACCGCTGCTGCCCCTTTGATGTTTTGGTACACCGTGCGCATGCGCCTCACATTAGAATTACTGCACTGGGCAGACTAAGTTGGATCTCCTCTCTTCAGTGAAACCCTCAACCCATCCAAAACTAAAGGGATGTGGAGAGTCCGGAAAAAGGACTACTTTGGGATTTGGTCATTCCCCTTAATAATCGCCGCCGTCTGTGCGCAAAGTGTCAATGACCCTAGTAATATGTCGCTGGTTAAAGAGAGGGTGGGAAGAATAAGAAAGGGGTTTCATGCACGAAGTTCTGAAAAATCACGTGGCTGGTCCTTTTGGTTTTCAGGTCCCCCTGTGGCAGTGGGAATGAACATTGACATTGCCAGCATCGACATGGTTTCTGAAGTCAACATGGATTATACCTTGACAATGTACTTTCAGCAAGCTTGGAGAGATAAGAGGCTGTCCTATAACGTAATACCTTTAAACTTGACTCTGGACAACAGAGTGGCAGACCAACTCTGGGTGCCTGATACTTACTTCTTGAACGATAAGAAGTCATTTGTGCATGGAGTGACCGTCAAGAACCGTATGATCCGCCTGCATCCAGATGGGACAGTCCTTTATGGCCTCAGAATCACAACCACAGCTGCCTGTATGATGGACCTGAGGCGGTACCCACTGGATGAACAAAACTGCACCTTGGAAATTGAAAGTTATGGATATACAACCGATGACATTGAGTTTTATTGGCGTGGGGATGATAACGCAGTGACAGGAGTAACCAAGATTGAGCTTCCACAATTCTCTATTGTAGATTACAAACTGATCACCAAGAAGGTTGTTTTTTCCACAGGTTCCTATCCCAGGTTATCCCTCAGCTTTAAGCTTAAGAGAAACATTGGTTACTTTATCCTGCAGACATATATGCCATCTATCTTGATCACTATCCTTTCCTGGGTCTCCTTCTGGATTAATTACGATGCTTCTGCTGCAAGAGTGGCATTAGGAATTACAACTGTGCTAACAATGACCACTATCAATACCCACCTCCGGGAGACTCTCCCTAAGATCCCTTATGTGAAGGCCATTGACATGTACCTGATGGGGTGCTTTGTCTTTGTTTTCATGGCCCTTCTGGAATATGCTTTGGTCAACTACATCTTTTTTGGGAGGGGACCTCAACGCCAAAAGAAAGCAGCTGAAAAGGCTGCCAGTGCCAACAATGAGAAGATGCGCCTGGATGTCAACAAGATGGACCCCCATGAGAACATCTTACTGAGCACTCTTGAGATAAAAAATGAAATGGCCACCTCCGAGGCTGTGATGGGACTTGGAGACCCAAGGAGCACAATGCTGGCCTATGATGCCTCCAGCATCCAGTATCGGAAAGCCGGGTTGCCCAGGCATAGTTTTGGCCGAAATGCCCTGGAACGGCACGTGGCACAGAAGAAAAGCCGCCTGCGGAGACGCGCCTCCCAGCTGAAAATCACCATTCCCGACTTGACTGATGTGAATGCCATAGATCGGTGGTCCCGCATATTCTTCCCAGTGGTTTTCTCCTTCTTCAACATCGTCTACTGGCTTTATTATGTGAACTAAAACATTGCTTCCCATGGGAAGCAAGGACTAGATTCCTCCTCAAACCAGATGTACAGCCTGACATAGAACTTGGAAAACACATCAATCCAGGACAAAAGTGATGCTAAAATACCTTAGTTGCTGGCCTATCCTGTGGTCCAATTCATACCATTTGGGTTGCTTCTGCTAAGTCATGAAAATGCTAAGGTCCTCGGGGTTTTCCAGTTAAAATGCAAGTGATTTGTACACGTGCTGGCAAGACTGAATCTGTGTTCCACCTTATCTGCTTAGTACACAGCCTATACGGAAGGGAATAATTTAGATGGTATTCCAGAAGGCTCAGTAGTGTCATCAGTCATCTTGCTGAGATGTGGTCATATCCAGATACTCCCCATTTTCATTCCTAAGGTTGTCATGCGGTCTTCCATGCCATGCAAACATCCTTACTGAAGACAATATCTGCCTGTCTTATTGAGGTGATGATGGTGCCATAGGAAGTTAATTCCCACCGGATTCTAGAAGATTCTTATGTAATTCAAACAAGATAGGGAGAGTCAAGACAGAGACTCAGGAAACCAATTTGGCCAGGCCATGTTTGCTTGAGCTTGGGAATCAACACTGACGTCTTCCATTTTGACGTTTAGAGACGGGGAGACTTCTAAACATTATCATGCCTGGTGGCCAAAAGAAATTTTTCTATAATGCTATTTCTGAGGCAGTTAAAAATAAGAGTTAATATCCCGGAACGGAGTGGAAAATTCAGAGACAACGGTTGTAACAAAATTAAAGCACGCAAGCAGCATGACCCTTCACCCATTATAAGCATGTGGTCCACACATTCTGTGTTCAGTGGCAGAAGGTAGAGTGAAAGAGATTTCTTTCCCTCCAAACTCACAAGCTTTTGACAGCATACCTGAAGAAGTTTTTATAGTGTACCTGATCAAAAGACAACCCCTAAACAGAAATGTTAGCAGAATTAGAAGCATCTTAGGTTACACTGGGAGTGATCCCAATATATGAATATAAAGCACAGACAGAGCTAGCAGACAAGATGCTTTTCTCTGACTCTACAACATTTTCCTGCAGTTTATTTCTGAATTTAATAGGGTATTTCAAAAGAAGGATTTGTTCATTTCTTTAGCGGGCTTAATGGTCTTTTCCAACTTTTCTTGTTTCTGAAATTCTGATTATATTCTTAAGAGACAGACAGAGTAAGTCTTTGGAGAGATTTTAAGAGAACTGTATTTCTTTATGTACAATGAAGTTCACCTTTGTCTTTCATGGCAAACAATACTCAAGAGATTATGTGCACAAATAGGTTTAGTTGTTGATTTGGAGAGTTTGATTTTTTTAGGGTGCTTTCGTTGTATATGTTGCAGTCTGCCTAATCAAATAGGAAGTCATGGAAAACAGAAGAACAACAAAGCCATAGTACATGGTGAATGTTATGAGCCTCAGTTGATACTGCAGAAAAATATATAGCTGATAATCAGGCAGGCATGATATATTACTTTTATTCAATTTTTAAATTATGTCATTGTGCTTCTTTCTATACTAATTGGATATATGCATTCATATGTTGGACAAAGAGAAAAGAATAAGCTCAGATATTTTATTTCTATCAATGTGAAGTTCATATTTTGCCTTTCTCAGAGGAAATAGTGAATTCCTCATTTTTCCTTAAAGTTAGATTTGATTGAAACTTTTCTTAGAGGATGACTTTGCTATTTCTATTTAAAAAAACAGCACTTCTTTTTAGAGTAACATCCCTAATTGTGCGTAGCAGCTAAGGCCAGTATCCGCCTGTGGATAAATGTATGTTTTCTTTCCCTGATGATTCAGCAGCTTAGAATATGATGGAGTCCTGCTGCCCTTCTATTCTTCACTGTCAGAGGGAAAAAAAAAAAGTTTAGCATCCTTCTGAAGTTGTCCCCCAGATAGGATTTTTTTTTTTTTTCCACCAGCATAGGGAGCTCTGGCCCTTATATTTTTGTTTATACACCTGAACACCTCTGAGTATGATCTTTGGGCAGAATCCAATCGATGCGTTGCCCATGGGCTCAGAGCAGAGATTCCTCGAGTTTCTCCAGGGACACACTTTCCCCTGGGCAGTCATTTTGAGACATCACACTAATAAAAGTGCCTGCCCCTTGTCACTAGGGGTTAAAGTTTGAGTAGCATATATCAAGAAGGAGCATATTGATAACTCAGGTTCACAACTCCAAAATGCCATTCTGGAAAGGTTTTTCTAGAGACAACTCGGAGCTCCAGCCTAGAAGTGGTTCTTATCTGCAATTACCGTAAAAGCCATAAAAATCCTTGATATTGTTATATGGTTCCAACAAAATTTTGATGTCCAGGAAAGTCAACAGAGAAATCTAGATCAAAGTGGACAGAAGAAGCAACTTAGCTGCATGAGCTTCAAAAGCATATGACCAGGGATTCATTTCTGACTGCAGTGTTAGGAAAAATCTTGGGGAAAGGAAAAAGATGGGACAGTGGAATAGAAACCCTAGAGTAAAATCCATTGATTGGCATTTAGTAACCATATAGGTAGAAAAACCTGACTCATCCCACCCAGAGATAACAGTAGATATAGAATTTATTCTTAAACAATTGTTTGTTTTGTAGTTGAACTGAATTTTAGTTACCAGATTGGGGGAGGGGAAGGGAGGGGAGCTAGATCTTTAAGTCTTTAAAAGAGACCAGTCAGCTTGGCATCCAGGACCACAAAAGTATGTTTTGGCAATTCTGATATAGCATTACTATCAGCTTATACATATATGTATAGTTTTTCTTTTGTTTATGAAGTAGCCAGATAGCCAGCAATTAAGGTGTTTTTCATCTCTGTGAAATTCATAGGTAAATTCTGACTCTAAAAGGCACACTCTCAATGAAATCTTTGATCTCAATCTGTATATATATATACTGTACATGACTGCTAGTAGGTATGAAATGCATTTTCAGAATTGAAAACTCATGCAACATAATCATGTGTTTGCATAAGGAATGTTACAATTCTTTCTACTGCAATTTAATAACAGGGAAAAAGACGTAAGCAGTGCCATCTAGACCTTTCCTTATTTCTTCAAAAGCAGTGCTAAGTGAAAAATAGTAATAATAAAAAATGGTTTAGGAACCAAAAGACTTTGCATTCTAGTATTAGGAACACAAAAAAAATCTGTCAGCTTACAAAAGCACAACGCATAGAGAAAGTTCAGTGGGGATGCATAATGGAGAAATGAATCACGTTTGTTTTAAGCAAGACCTGCATTAAATTGTCTACTAAGACAATTTCCATTTTCTATAGGTAACTGTGTTCCAATTTTATGATTGAATTCATACAAAAACAGCCAACAAACAGGTCTTACCACATATTTACATGTATATATGTGTATATATAGATCCATATAAACATACATACATATATATGCATTCATATGTTGGAAAACAAAAGGAATAAGCTAATATGTTTTATTTCCTTCATTAAACCAATGTATGAATATTTTTAATTTGGCAGCCGACAAATCAACATATTGAAACAAGTAATACAGGGTACTGAGCATTTCTCTATCAGCGAATCAATGCCTACAGTTCTTATGAACCACTGCACAGTTTGACACTCTAATAGTACTGTACCTCAGAACATGGAAATCAACTAGTTCTCACATTGCTTGTCTACTTATTCTCTTTTTCAAGGAAACAACTAGCATTGTTCAATGGTGATTTAAAAGCAAAAATGTCTTAAGAAAACAGAAAATGATAAAAAAAAAATATATATATATATATATTCCTCCCAAGAGGAGGAAAAAAAATAACTAAACCCCACCATGTTGGTTAGGGCAGATACTCTCAACTGTAGCAATCATACCATTTTGCTAAATGTACAGAGTCCATGTAATGTGAGCAACCATAACTTTCACTGAGCGTGTGTAAATATTAAAACAGATTTCTTAAATATTTTTAACTTCTAATTTGTATTTTATGGTAAGGCAATGTGCAAATTCTGTTTATGGCTTAAGTTGCTGTGTTATTATGTAAATAATTAAACATGCTGTAAATGAATAGTCAATAGATACAAATCATTGTTTAGTTTTTTTTCTTTTTTAGTTTTTATTTAATTTTTACTAAGTAAAAATAGTTACTGCAGCCCCAGCAGAGAAATTAAAACACTCTTTTGCATAAATGCTTTGGGATCCCAGACAGAAGGGTTTTAATTCGCTCTCTCTCACACACACACACACACACTTTTTCTTGCCACTCCCACTCATACCCCATCTATGGGAAACACTGTAGTGTTTATAACAACCAAGAGATAGCCTTAGAAATGGCAACTTAGAAATGGGAAAAGCAGAAATGATCATTGATTACTTGATAGATCTTTTTATACATAAGAGTTTAAGAAACCAAAGTTCATAACTTAAATCTCAATTTTCAAAGACTAAAAGTTTATATTGATGGCACTACAGGAAAAACAAATGCTTATTATATACCTGCTCCAGATATATGTTACACAATAGCACATAGAGAAGACTTTTTTTTTTTAATAATAGCATTTGTCGTTAGATAGCATTTTTCCTTTTAACCAAAGACTCCATAATTATTTTAAAAAAAGAAAGAAAAATGGAAAAGTGAGGGAAAATAGGAGAAAAAAAGACACTGCTTCACACCAAAGGTTTAAAAAATATTTTCCAAATATACGAGGGACATTGTAAAAAAAGTAGTAAGGAC EMBV3_35699 CACTCACAAGGCTTCAACAAACTGGCAGAGGTGTTTCCTGAACGTCTGTTTTGCTTACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18889 CTTCATCTTCAAGTTTTCTGCCAGGTTACCCACCTTCTTCCGTGCATGGGTCCAAAACCG Gene GeneID:523473|TAS1R1:XM_002694166:591_cdna Constitutive 0 NULL GeneID:523473 16 GENE TAS1R1 NULL taste receptor, type 1, member 1 EMBV3_05661 AGCAAACCCACAGCATAGTTTGTGTACTGGAAAGGGTAGCAATTTCTGATGTGGAGGCAG Gene GeneID:525072|PLA2G4A:NM_001075864:78_cdna Constitutive 0 NULL GeneID:525072 16 GENE PLA2G4A NULL phospholipase A2, group IVA (cytosolic, calcium-dependent) EMBV3_42465 TGGTGAGCAGCGAAGGGGAAGGGGAGCAGAACGAGATCCGCATCCTCCAGGACAAGCTCA Gene GeneID:281879|ITPR3:NM_174370:44_cdna Constitutive 0 NULL GeneID:281879 23 GENE ITPR3 NULL inositol 1,4,5-triphosphate receptor, type 3 EMBV3_06222 GCAGCAAAAAGGGAAAAGCAGAAAAGATAGCATTGCATTACTTTCCAGAATACCAGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28696 GGTGTCCCCAGGGGCGTGCCTCTCAGAAGTCAGGGACTGACCATCAGCCAGGATCAGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02788 GAATCCTGTTTCATCCTCAGTACCTTAAAAGCCGAGAGCAACGACGGCTACCACGTCATC Gene GeneID:518436|TFCP2L1:XM_002685443:60_cdna Constitutive 0 NULL GeneID:518436 2 GENE TFCP2L1 NULL transcription factor CP2-like 1 EMBV3_11959 CATCGCCTACAAGGTGACCCTGCTTCTGAGCTACCTCGTCTTCCACTCGTCCCTGATACA Gene GeneID:789168|ZACN:XM_002696171:139_cdna UTR3_Alt 2 NULL GeneID:789168 19 GENE ZACN LGICZ1 zinc activated ligand-gated ion channel EMBV3_43285 TAGGGGAGGGAGCAGGTTAGGTCTGGGTGGCTCTTCATTCTTAGCTTCTGTTTCAGGCTT Gene GeneID:527061|ZNF541:XM_002695185:850_cdna Constitutive 0 NULL GeneID:527061 18 GENE ZNF541 NULL zinc finger protein 541 EMBV3_15795 CATCTGCTTGCCCCTTTTCTATTCCACCCGTATGTGCCCCAGAGTGTGTGTCCTCTTGGT Gene GeneID:782678|LOC782678:XM_002693074:400_cdna Constitutive 0 NULL GeneID:782678 15 GENE LOC782678 NULL similar to olfactory receptor MOR204-11 EMBV3_07601 GAGACTCACCAGGGAGAAATATGAGTGGGCAAGTGGCATCAACATTGGGACCTACAAAGC Gene GeneID:100297099|LOC100297099:XM_002700115:2_cdna Constitutive 0 NULL GeneID:100297099 X GENE LOC100297099 NULL similar to X antigen family, member 5 EMBV3_11835 AGGGGGCACCTCTCAAGCTGTCACTTTATGGACTGTCTGTGCAATTACGTCCGCCAAAGA Gene GeneID:523746|RPS6KA4:XM_002699332:185_cdna Constitutive 0 NULL GeneID:523746 29 GENE RPS6KA4 NULL ribosomal protein S6 kinase, 90kDa, polypeptide 4 EMBV3_03512 CTTGTTTCGCTGGAGACTAAGAGGATCCAAACTTCCTGCAGCATTTTCTTAGAGGAGAGA Gene GeneID:538794|CPEB4:NM_001105420:136_cdna Constitutive 2 NULL GeneID:538794 20 GENE CPEB4 MGC159945 cytoplasmic polyadenylation element binding protein 4 EMBV3_13977 CTCATTAATATTTTACTTTTTATTTCCAGGGAAGGGTGTATGTGGCTACGTCTGAGGCAA Gene GeneID:282329|PTGER2:NM_174588:41_cdna Constitutive 2 NULL GeneID:282329 10 GENE PTGER2 NULL prostaglandin E receptor 2 (subtype EP2), 53kDa EMBV3_12499 CCTGGGAGACAGCGCTGTGGGCAAGTCCAAGTGTTCGATGTGCAGAGGAAAATCACGTAC Variant GeneID:515671|RABL2B:NM_001034508:43_cdna 174^363 3 EMBV3_20797 GeneID:515671 5 GENE RABL2B MGC127908 RABL2A RAB, member of RAS oncogene family-like 2B EMBV3_13456 GGAACTCTTCCTCTAGGATGCCCCCCTCTGCCGTGGAAATGGACAGAACTCTGACACTGT Gene GeneID:527872|KCNH6:XM_002696063:387_cdna Constitutive 0 NULL GeneID:527872 19 GENE KCNH6 NULL potassium voltage-gated channel, subfamily H (eag-related), member 6 EMBV3_02620 CTTAGCTCCTTAAACAAACTAGAATTATTTCAGCTAAGGTATCAGGGGAGAACTCTAGGG Gene BVV0102_217117 + 0 NULL GK000008.2:66625816-67236849 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29522 ATTCACATAGCTCTGCTGCCCAGGCCAAAGTTGCCCCAAACTGGAAGACCTGCCTCCCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40096 TTAGCCAGCAAGAATTCAGGAGCTAAACAGACTTGGGCAACCAGTACCAACCAAGGGAGC Gene GeneID:100336715|LOC100336715:XM_002698364:142_cdna Constitutive 0 NULL GeneID:100336715 26 GENE LOC100336715 NULL apobec-1 complementation factor-like EMBV3_17863 CTTGTGAAGCCTTTGAGAGGGGCGTGGCCACGAAAGGATTTTCTGAGGAGTTGATTTTTT Gene GeneID:615920|SLC2A11:XM_002694667:212_cdna Constitutive 0 NULL GeneID:615920 17 GENE SLC2A11 NULL solute carrier family 2 (facilitated glucose transporter), member 11 EMBV3_04287 CACCGTGGAACAATAAATGATTCTGTTTGACCGGTTGTTCTCTGGCCACTTGTTTCCTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07804 CCTGACCTCAGCCTGCAGTCTCCTGAGGAGGTTGCTCAGACAGCAGATGGTGTGGACGCT Variant GeneID:617416|FAM125B:XM_002691585:121_cdna 158^280 1 EMBV3_13743 GeneID:617416 11 GENE FAM125B NULL hypothetical protein LOC617416 EMBV3_42184 CAGGGTGGTGCTATCGCGCTTGAAATTAAGGTTAACGTAGCTGCTAAAAGAGGAATGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24240 TGCCTGGGCACCATGGAAGTGAAGAGCAAGAAGAAGCAGACTACAGTGCCTTTGGTACAG Variant GeneID:539687|PARD6B:NM_001098104:1237_cdna 252^474 1 EMBV3_22022 GeneID:539687 13 GENE PARD6B MGC149024 par-6 partitioning defective 6 homolog beta (C. elegans) EMBV3_24843 GTGGATGGCAGGAGGTGTCAGCGCAGCCTGCAATTACCTTTGAGCACCTTCTTGACATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22391 GGCTAGGCATGATGATAACCACTTGCATAAGTTGTCTCACAACAAGAGGTCCAGGTAAGG Gene BVT0102_146633 - 1 EMBV3_33244 GK000002.2:52365185-52552245 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39108 TCGGCGAAGGGGATTTTTATTACCATGCAGCCATTTTTGGGGGAACACCCACTCAGGTCC Gene GeneID:281780|GGTA1:NM_177511:24_cdna Constitutive 6 NULL GeneID:281780 11 GENE GGTA1 NULL alpha-galactosyltransferase 1 (glycoprotein) EMBV3_08690 AGGATGCCCCTTCAGTCTGTGACAGGCAGCACGTTAAATGCCCAGTCTGCAGAATACTAA Gene BVT0102_281160 + 0 NULL GK000018.2:63603576-63610149 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087619 TCONS_00087621 TCONS_00087620 TCONS_00087622 TCONS_00087623 1 XLOC_052549 Coding TCONS_00087620 XLOC_052549 Coding Coding NLRP13 18:63604899-63640678 j TSS65041 3758 1 TCONS_00087620_1 1089 12 0.895298786964056 0.0101982499508908 0.00823383065438725 0.00829152955517772 0.00699221330798466 0.00449783766398425 0.00373215461701768 0.00714008619625819 0.00633865086967276 0.00423457161345293 0.000217115102132663 4.73053949934929e-08 3.67687631223062e-05 0.000252698962301298 2.54250350415359e-05 0.000326198471976962 0.000248550892181353 1.91894380079012e-06 4.86449225506181e-08 0.00816059227403557 0.00858514933208523 0.00251796846759326 1.03425756239531e-05 5.5092485287831e-06 4.29298249911244e-06 0.00613356609073612 0.00593782052774182 0.00637359581264681 3.36244891698642e-06 2.54714398136541e-05 2.99645726524347e-05 XM_002695466.2 NLRP13 PREDICTED: Bos taurus NLR family, pyrin domain containing 13 (NLRP13), mRNA. 0.0 6524 100.00 0.962213943587014 XM_005258510.1 NLRP13 PREDICTED: Homo sapiens NLR family, pyrin domain containing 13 (NLRP13), transcript variant X1, mRNA. 1e-108 399 68.33 0.299361362426823 TCONS_00087620_1 sp|Q86W25|NAL13_HUMAN NAL13_HUMAN NACHT, LRR and PYD domains-containing protein 13; 0.0 837 44.57 0.952249770431589 4 coding 1 1 1 1 -0.509751389883061 0.152834572247833 -0.278044437899894 0.00371134593713639 GCAGACTGCTTCGGGTCCGGAGTCTGCGTTCTAGAAACTCGCAAGAGCTGAGAAGACAGCTTGGAGCTGTTCCTATTGCGGCTGGAGACCTCGCTCCCGGGCCGATGGCTTCCCCTGCCGGCATTTCTTGGCATGATGGTGCCCGTGACCAGCTGCTGTCCCACCTGAGGGGCTTGGATCCCTGGCAGCTGGAGGACTTCAAACTAGCCCTGCAGTGCCCGGAGCTGCTGCCGGAGGGCGCCCGCAGGATCCCCTGGGCAGACCTGAGAGCCGCGGGCCCCGCCGACCTGCTCTGCCTGCTGGAGGAGCGCTTCCCCGGGAGGCGGACGTGGGAGGCGGCCCTCCGCGTCTTTGAGGACCTGCGGCTGAGCTCGCTGTGCGAGCGGATGCGAGCAGAGCTGCACGAAATGTCACAGGTGTGCAGACTCCAAGATCCAAACCAGGAAGAACCAGAGACGCTGGAAGAGACAGCCCACAGAAGAAGATACAGGGAGAGGCTGAGGACCCGGATCCTGGCCCTGTGGGACCGCACGCCCTGGCCCGAGGACCACATCTACCTGCGGCACGTGACGCAGCGGGAGCACGCGGAGCTGCGGGGCCTCCTGCGCCCGCGGGGGGCCGGGGCGCCGCCCCTCACCATGCTGCTGGAGGGCGCGGCCGGCGTGGGCAAGACCACCCTGGCCACCAAGCTGGTGCTGCACTGGGCGGAGGGCGTCCTCTTCCGGGGCCGCTTCTCCTACGTTTTCTACATCAGTGGCCACTGGCTGGCCAAGCTCGGTGACATCAGCTTCGCTGGTCTGCTGGCCCTGGACTGGCCGGACTCGCAGGTCCCCGTGGAAGAGTTCAGGGCGCACCCCGAGCGGCTGCTGTTCGTCATCGACGGCGCGGAAGAGGTGACCCTGGGCTCCAAGGGCTCGGCCAGCCGGCCCGGCGCCGACTGGTACCAGGAGCTCCCGGCGGCCAGCATCCTAGTCCGCCTGCTGAAGAAGGAGCTGGTCCCCGAGGCGACCTTGCTTGTCACCGCTGGGCCCCCCGGAGGCCACGCCCTCCGCGGGCTGCTGCTCAGGCCGTGCCGCGTGGGCATCCCGGGCTTCACCGAAGGGGACCGCCGGGAGTATCTCAGGAGGTTCCTGGGGGACCCGGACGTGGCCGAGGAGGCCTGGCGCCGGATGCAGGGGTCAGAGACCCTGGTCCGCTTGTGCGCCGCGCCGCTGGCGTGTTGGGCCGTGTGCGCCGGCCTCAAGCGGCAGCTGGCCGGCAGCCCGGCACCGGCGCCGGGCGCGCCCACCCCCACCGGCCTCTACGCCCAACTCTTCTGCAGCCTCCTCGCGGGGGCGGAGCCGGGTCTGCGGACCGGCAGCTCGGCCGGACAGTGGAGGGCCTTCTGCTCGCTGGCCGCCGAGGGGCTGTGGCTGGCCGCCTTCACCTTTGCAGGAGACGCCCTGGAGCGCTGGCGCCTGGAAGCCCCTTTCATCGACGGTCTGCTGAGGCTGCAGATTCTTCGAAGGGTCAGCGACTGTGAGCACTGCGTGACGTTTGCTCACCGGAGCTTCCAGGAGTTCTTCGGGGCCTTGTTCTACGTGCTCTGGGGGGCCCAAGGCTCGCTGGGCGGGGTCCCCCGGCATCAGGAGATGAGGCGGTGGCTGAACCACGCCTTTGCCGACGCCAACCCCTACTGGCGTCAGATGGTGCGCTTTTTCTTCGGTCTCTTAGGAACAGACCTGGCCAGGCAACTGGAAGAGGCCGTGGGTTGCCGGATGTCCCCCGGGGTGGCCGACGAGGTGTTGGACTGGGCGGAGGAGCTGGAGAGGTGCGGCGCCGTCTCGGGGCGCTTTGACTTCCTGTGGCTCTTCCAGTGCCTGCACGAGACCCAGGACGAAAACTTGGCCCGGCGGGTTTTGAATCGCCTCCCAGTGGCCGATCTGGACATTCAGGGCTGCGAACACCTCCGGGTCTCTTCCTTTTGCCTCAAGCACTGTCAGAAGTTACGAAAGCTGAGGCTCTCTGTCAGCCACCGTGTCCTGGAAAAGAAACGGACTTCCGGCCTGGGAACTCCGGAGATGAGGGTTGCCGATTTCCGGATGCATCAGTGGGAGGATATTTGCTCGGTGTTTTGCAGCGGGAACCTGAGCCAGCTGGACCTGAGTAACAGCAAACTTAGCACTGCCTCCATGATGAGACTCTGTCTCAAGCTGGGAAACCCACAGTGCAGACTTCAGAAACTGGCCTGGAAGTCCATGGCCCCTGTGGAGGGTCTGAGGAAGCTTGGTCTTCTGCTTCGTGGTGACCGGCACCTGACCCACCTGGACCTGAGCTCCAACAGCCTGGATGCCGCTGTGTCCAGGGGCGTGTTCAGAATGCTGGGGCACTCAGCCTGTGGCCTCAAGTATCTGTGGTTGGAGTCCTGTGGCCTGAGCACTGAGGTTTGCCATCAGCTCTTCACCGAACTCGGCAGGAACTCGAGTCTGAGCTTCCTCAGCCTGGCGGACAACGACCTCTCCCACGTTGAGCTGGAGAGACTGCGGGAGACCCCGGGGACGGCCACCTGTGCCCTGAAGGAGCTGTCGCTGGAGAAGGGGAACCTGTCAGCGGCCGCCTGTGAGGACTTGGCCTCACTTCTCACCAGCACCCCCCGCCTGACTCGACTGTGCCTGGGACTGAACCCGCTCGGAGATGAGGGCGTGCAGCTGCTGTGTGGCTCCCTGACTCGGCCTGAGTGTGTCCTGCAGAGACTGGAGCTCTGGTGCTGCCGGCTCAGCACGCCCAGCTGCAGGCACCTGTCGGACGCCCTCCTCCGGAGCCGGAGCCTGACGCATCTGAACCTGAGGAGGAACAGCCTAGGAGACGGGGGAGTGAAGCTTCTGAGCTCAGCCCTGGGCCGTGCGGACTGCGCCCTGCAGAGCCTGAACTTGTCACACTGTTCTCTCACGGTGGCGGGCTGTCGCGAGCTTGCTCACGCCCTCAAGCACAATGGTCACCTGAAGATTCTGGACGTTGGGAACAATGACATTCAGGACGAGGGGGTGAAGGAGCTGTGCAGCGTCCTGAAAAGTCCGAGTTGTGTGTTGCAGACACTTGGGTTGGAGAAATGCAGTTTGACGGCCGCTTGCTGCCGGCCGCTGTCCTCTGTTCTCGGAAGCAGTAAAAGCCTGGAGAACCTGAACCTTTTAGGAAACAACCTGGGGCCAGACGGAGTCAGCAGGCTGTGGATGCCCTTGAGAAAGCCGACGTGCAAGCTGCGGAAACTCGGGCTCGAAAAAGACCTGTGCTCTGTAGTGAGTGCCGAGTTGGAGAAACTACATGAGAAGGGGTGCTTTTTGAGAGTCAAGTCTCAGTGGGACTTTAATGACCCTGAAGAGAGATGGTGGTGGTGACCCATGGAGGCGACACCACAGGTTTACCACGGCCCGTCCTGGGAGAAAAGCCTCCCTGACGCACCGTGTGTTGCTCAGGAATTTCCGTTCATGGGGACGAATGAGCCGTCGCCTCCAGGATGCCCCTTCAGTCTGTGACAGGCAGCACGTTAAATGCCCAGTCTGCAGAATACTAACCCAAGTCTCTATTTGGCCCAAGATCCTACATGGGCTCACCTGTAAGTGTTTTTTTTCCCGCGTTGGTGTAATAATTTAAATTCTTGGGGCCATTAAGAGGATTAAATAAAGCAAAGGATATAAAAAAATGTCTTGAGGAAATCAAAAACTTCATTTCTCATGGATTGAGAGGTGGGATAGACATAGTTATGATTCCATAATTATAAT EMBV3_26717 ACCTTTGAAAACTGTGGTGACCTTTGTGGACATTACCCAGAAGCCAGAGCCTCCAAGAGG Gene GeneID:511035|TCTN3:XM_002698403:324_cdna Constitutive 0 NULL GeneID:511035 26 GENE TCTN3 NULL tectonic family member 3 EMBV3_36553 TTGTATGGGGAAGATTAGACCAAAGTGTAGTCATTTATCCAGAAGGCCTGTATCTCACCC Gene GeneID:517320|ZSWIM2:XM_002685250:47_cdna Constitutive 0 NULL GeneID:517320 2 GENE ZSWIM2 NULL zinc finger, SWIM-type containing 2 EMBV3_26124 TTGTATAAAAGTCTCTTGTCTCTTGCTATTTCTGCTGCTGTTTCTAGAAATTAGCATTGC Gene GeneID:530616|TCF7L1:XM_002689148:146_cdna Constitutive 1 NULL GeneID:530616 7 GENE TCF7L1 TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box) EMBV3_34840 GAGGACCACGGATGGGGGCGCTTAAACAACAGAAGTATTTTTTCTCATAGTTCCAGAGGC Gene BVT0102_348014 - 1 EMBV3_22953 GK000023.2:47269547-47328260 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138059 1 XLOC_084268 NonCoding TCONS_00138059 XLOC_084268 NonCoding NonCoding TXNDC5 23:47316222-47317546 i TSS103349 1324 1 TCONS_00138059_1 101 0.688066465256798 1 0 0.000534363882538165 6.40887600388464e-05 0.00127347401478917 4.39040817112551e-05 2.23738551635237e-05 1.08067981746218e-05 0.000232710857524497 8.93461577699275e-06 6.55524733515596e-05 0 0 5.4013310156534e-06 0 0 1.14018226030434e-05 0 0 0 0.000146235084736667 0.00224596520991193 4.58569683717489e-06 0 0 0 0.000708196943618134 5.32135635193703e-05 0.000697728477288566 0 1.46664734043051e-05 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 6e-50 203 84.49 0.140483383685801 0 noncoding 0 0 0 0 0.0033866899787296 0.980755164863743 0.00492555500486785 0.921347190073859 CCTTCCAGTGAATATTCAGGGTTGATTTCCTTTAGAATGGACTGGTTGAATCTCCTTCCTCGATGCATGACCGGGCAATAAATCGAGACAGCTGTTAAGGCAGGAAAAGCAACTTTATCTGGAAAGCCAGCAGACTGGCAGGACAGCAGACTGGTGTCCCAAAGAACCTTCTTGCCCAGGTTTGATGCTATTAATAGTTTCTTTTATAGAAGGAGTTGGGGGGGAGGACACTGTAAAGTAAAAAGGTGATAAGTTGTTGCAGTTATTTCCTGACTCTGGCCAGACTCCAGAGGGGAATGTATCAATGTCTTCCTTCCTGCAGCCACTCACAGGTGGGCCTGGTCAGACTGTTTCCTGTGAACTGAACAAAGGTATTCTAACCTAATGTTTAGGCTTGGGAGGCAGGGTTTCCGTAGATGGGCCTTTATGTATATTCTAAGTTATAGGCGACATCATTTTGGGCTTTCCAGGTGGCGGGTGCAGTGGCAAAGAACCCGCCTGCCAATGCAGGAGGCACAAGAGATGCCGGTTCGATCCCTGGGTGGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCATTCCAGTGTTCTTGCCTGGAGAATTCCATGGACAGAGGAGCATGGTGGGCTGTATAGTCCCTGGGGTCGTGAAGGAGTCGCACACAATATCATTTTAGTGATTAACTTGTAGCAGAAGCAATAGAATACAAAGGTCCAAGGAAAAGGAACAGATCCAACGTGGAGTCAGATTTGTTCTTCCCTGTCGATTCTTCGTGTGAAAAGGGCCCCTACTGAGAAGTCAGGGACCCGCCCGTACAGTCACAGATGGTGTGGACTGTGAGCTGCAGGGGACTGCAGGCTGTCCCCTTTCCTGGACAGCGGGGACCGTGGCTGGACCTTCCTTAGCAACTTGGCTTGGTTTGCCTCTCACTGGTCTTGTATTTTGTTGTGTTAAAAAGCACGGAGAGGAAAATGAGAAAAGGGAGTTCACTGTGATATCAGAGAAGAGGTGCCTCCTTCCCTGAGCTGAATTCCAGGGTAGAAGGCCCCTGGGTGGCTATTCCCGGGCACAGGTCCCCCTCCAAAACAGGACTTCCTGAGGCTCAGTCTCACCCAGCGAAGGGAAGACTTGGATGGGGTTTGACTTTGCCTGGGCCTCCACAACAGAGGACCACGGATGGGGGCGCTTAAACAACAGAAGTATTTTTTCTCATAGTTCCAGAGGCTAGGAGTCCAAGGTCACGGTGCCAGCAGGGCGGGTGTCTTCTGAGGCTTGCGGACGACTTTCTTCTCCCGTGTCCTCCTGTGGTCTTTCCATCTGTGTG TCONS_00133591 . 5' 700 TCONS_00133591 . 5' 700 EMBV3_23106 ACGGTCCAGGGTCTGACCTCGCAGGCAACTGCATGTGATCATGTCAGTTGGTTGTATCTA Gene BVT0102_027780 + 0 NULL GK000005.2:44793486-44886445 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191708 TCONS_00191709 1 XLOC_117002 NonCoding TCONS_00191709 XLOC_117002 NonCoding NonCoding - 5:44853760-44864703 - TSS143619 2611 1 TCONS_00191709_2 85 0.188433550363845 2 0.761560957777372 3.28863514242866e-34 0.000106849566678656 0.000416806071599992 2.62549049579502e-23 6.78968778680792e-29 3.1989752714014e-17 1.82279994774284e-05 0.000214544200817009 2.58759626323173e-09 5.726704229822e-06 1.93194455984367e-06 8.70697974064395e-30 8.16095928744413e-21 5.94477335352186e-20 5.74185044391327e-65 4.50889144923501e-24 0.000410257405127014 1.26054305414154e-32 0.000194637909852751 8.70912729173913e-05 5.1577600489542e-50 0.000191604404208763 0.000147779230104569 7.92964624947245e-05 2.73486359170325e-28 3.59184940604126e-05 5.88938472929632e-05 4.11600999059793e-05 0.000161506222711352 0.000102913966975026 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 4e-118 430 84.38 0.137878207583301 0 noncoding CCAAAGAATTGATGCTTTTAAACTGTGGATTTGGAGAAGACTCTTGAGAGTCCCTTGGACAGCAAGGAGATCCAAACAGTCCATCCTAAAGGAAATCAGTCTTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCCATACTTTGGCCATCTGATAGAAAAGATCCTGATGCTGGGAAAGATTGAAGGTGGGAGGAGAAGAGGACTATAGAGGATGAGATGGTTGGATGGCATCACTAACTCGATGGACATGAGTTTGAACAAGCTCTGGGAGTTGGTGAAGGATAGGGAAGCCTGGTGTGCTGCCATCCATGGGGCTGCAGAGTCGGACACGACAGAGTGACTGAACTGAACTGAAAAGTCACTTAATGTGAAACATACTATTATAACCATATTTAACTGTACAGTTCAGTGGCACTGAGTACATTCACATTATTGTGCAGCTCTCACCATTATCCATCTCCCGAATTTTTCACCTTCCCAAACTGAAACTCTGTCTCTGTTTTGATTCTTTGGAAGAAATTCAAATGGAAAAGCATACAGTGAATAAAAATTAGAGTTTTGCAAATAAGAAAACCCAGAAATCTGCCAAGAGATGCACAAAACAATACTTGCCTGTTGGGCTTCCCACGGTCCAGGGTCTGACCTTGCAGGCAACTGCATGTGATCATATCAGTTGGTTGTATCTAGGACGTTAACTGATCCTACTGAAATTCCACAAGAGATTAAAAAAGTGAAAAAGAAGTGTGCATTCAAAAGCTGCACATTTCCCAGCCATTCCTGTGGTGGGCTCTATAGCCTGTGGAGTCGGCAGCCTGCTGAAGGACACTCAAGACGTGTGAGGCAGCACAGTGAGTTGGGGTGGAGTGGAGACAGAGTTTTTCTCTACTGTGCAAGCCTGCATGGCAGCAGAGGAAGAAAAAAATAAAACACCCTTCTTTGAATGCCTGCTCTCCTTCCCTGAAGGCAAGGAAACCATACACACCTAAACGGAAGTCTCATGCACCAGGAATAAGCATGTTTTTAAGGACTCCTTGTTGATGCAACTGACACACAGAGAAGAAAAAGGGGAATAGACAACTATTTGATATTTCTATATCAAAATAAATCAGCAACCTACCTTTCAAGCATCAAATTAATACGAAACTGTTCACAAAGCAATCTTGCCAAAAGGAGAAAATATCAAATATTTGGAAACATTCAACCCAAAATGAAACTGCATGAAGTAGAAACATTTGGACTGAGTGTTGATTGGAAACAAAGGAACATCTACGAGCTTTATGGAGGTTTGAGATCTTCAGCTCAAAGACCTTCTCCTCAGAGGTGTTTCCCTGATCACCTGAACGAAAGCAGCCTCCTGGTTCGCAGTCAGTGTATCTCATCGTGTTGCTCTGTTTTACTTTTTCCACAGCACATGTCATCTGAAATTATCTTGTTTTTGTGTTTGTTTTCTGTAGCATGTCCTTAAGTGCAGGCATCCTGCCTTATTTTCCTCGGTGTCCCAGCTCCTTGGCACAGGAAGTGCTCAGTACATACTTATTGACAAAGTGACAGGGTGAATATCACGCATGGCTCATTGGAGCTAGTTCCTCAAAACATTTTTCATGATGGAAAAGTGTCAGAAAAAAAAACATTCACTCTGTTCAGGATTTACCTCAAAAGAATGATTGGAGAATTGCCACAGTATAGTCGTGAACAGCACAGAAACTTCAGAATACCTGAATGTATCTCCTGTAGAACCTGGAAAAGCGCCTACTAAAGATCTATCAAGTGAAAATTTCAGGATTTAGTTCAAGTTTGTGCTCATAGCATTAAGAACGCATTATTTATTTTGAAACACTCAGGCAGTGTAGCAGAAGAATGAGAGATGAGATTCCTTTTAAAATAAATGCCATGCTTAAAGAATGCCTATACTTACTAAGCTCAAAAAATATTTTCTTCTGTCTCCCATGAAAGCATAAATCTATTCAAAGTCTTTAAAATGAAGCATGGCACATAATTTGTTCTCTTTGGTTGCTTTATACAACAGCACAGAGGGTGGAAGCAAAGATGGTAGTTCTGATTCAAACTCTGCCGCTCACTTGCTTGAGTAGATCACTTAATATCTGTGCACAATTAGAAAGGCAATAACACCCATCAATATTCTTGCCCTTCCCAGAGTGGCTGTTACACTCCAGGCATGTAACCTGTAAGAAAGTGCTGAGTTTTAGTGCTAAATATTAAGAGTTGTAAGGATAGTAATTTTTTTTACATTGATGATAAAAGGATGTGTCAACCTAAATAAAGAGATAAACTGAGGCAAGCTCAAATTACTAGTAATTGTGTTGTGTTCACTGGTTAGGAGATGAGTCTCAGCCTTCTGTAGATCAGGCTTTTGGATCTTAAGTTCAGTTTTTCTGAGGGCGAATGCATGAGTGTCTCCATTTCATATCCTCCAGTTCCATTTCAGATCAAGATCCTTTCACAGATGTGATATTATGACTTTGGTGGAGAATGTAATTCTATTTCAGTGGTTATAGCAAAGCACTTAACTGCCAGAACTAGCCATACTGCTTGCCTTGAAGAGCAAATGAAGTGGTAAATGCAAGAAATGGGGACAGAATAG TCONS_00194805 TCONS_00194807 TCONS_00194808 r 5' 60276 TCONS_00194805 TCONS_00194807 TCONS_00194808 r 5' 60276 EMBV3_35322 AGTTCTCCGGTCATCTTTGCAGGTGGTCAGTTGACCAAGCTGCACCAGTTGGCAATGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33307 TTACAGAAGACATCTGGTAGGATAATTTGCAATATTTAGCTCTCTGGAAGTGCCTACCAC Gene GeneID:509064|C4H7ORF11:NM_001075389:22_cdna Constitutive 0 NULL GeneID:509064 4 GENE C4H7ORF11 MGC140606 chromosome 7 open reading frame 11 ortholog EMBV3_04982 CCCCTGGTGGTCATAGGGGGGAGAACATTGAGGGAAAGGATACAGGAAGAAATGGAATAA Gene BVV0101_007563 + 0 NULL GK000019.2:27200806-27204708 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099366 1 XLOC_059609 NonCoding TCONS_00099366 XLOC_059609 NonCoding NonCoding - 19:27202777-27203635 - TSS73742 858 2 TCONS_00099366_3 93 0.377622377622378 1 0 0 0 0 0 0 0 0 0 0 0 4.00207710712809e-05 0.00019170332309775 0 6.57901657538616e-05 0 0.000954262707381547 0.00284444862175046 5.84868772435476e-05 0 0 0 0 0 3.9078447470156e-05 0 0 0 1.11948744667972e-05 0 0 XM_005226615.1 CXCL12 PREDICTED: Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), 2e-66 257 87.86 0.236596736596737 0 noncoding TATTTAATCCACAAAACAATTTTAGGCGGTGGAAATTACCCTTCCTATTCTGCAGATGAGGGAACTGGGGCTGCAAAAATGGCAAACAATTTGCCTAAGGTCACAGCCAGCAAACCGGGGAACGTTCCAGCATTGGGAAATTGGGAACCCAAGGCTAGGGATGAAAGTGATGGTTCCAGAATCCCAGGGGACAGGGACCCCAGGGACCTCCAGGATGTGAGAGAGCATCAGAGACAGGGTAAGAAAGAATCCATGAACTATGGGAGCTAGGAAGCATCGTGTGAGTGGTTGGAGTCCTGACTCCTTGAGAATCTGGGACACGTCTCTCTCTCAAAAGAAACTGTACACAGAGACAGGGAAGAAGTCTAATAAGTTTACGGATAGGTGGCTGAGGACAGGAGATGCTATTTATTCCATTTCTTCCTGTATCCTTTCCCTCAATGTTTTCCCCCCTATGACCACCAGGGGGACTCCTAATTGGAAAAAACAAACCAGAAAAAAAAAAAAAAAAAACACCGCTCAGGTTCGTTGTGGGGAGTAGTGAAAAATGAAAGAAAGTGAAGTCACTCAGTCGTGTCCGACTCTTTGGGACCCCATAGACTGTTGCCTACCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAAAGTACTCAAGTGGGTTGCCATTTCCTTCGCCAGGGGATCTTCCTGACCCAGGGATCGAACCCAAGTCTCCTGCATCCCAGGCAGAGGCTTTACAGTCTAAGCCCCCAGTGGGGAGTAGTACCAACCCTCATTGGCCTGCCCCTCACGCACACTCCTGTGTTTTATTCAATACATACTTATTTAGAAACAATGTGTTGTGTCTCAGGTAGTATT TCONS_00092978 . 5' 1074 TCONS_00092978 . 5' 1074 EMBV3_43633 GGAAAGGTCTGTCTTTGGGATGCTCGACTGTCTTTGCCCTTCGTCTTCTTCCCCATCCTA Gene BVT0102_240602 + 0 NULL GK000003.2:22085076-22106426 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172526 TCONS_00172524 TCONS_00172527 TCONS_00172525 1 XLOC_104160 Coding TCONS_00172527 XLOC_104160 Coding Coding BCL9 3:22105500-22131368 j TSS128487 5998 2 TCONS_00172527_11 780 10 0.76850813778173 0.000877745445949103 0.00127153939698911 0.000805723223646705 0.000376575701003729 0.000629773436362963 0.00027625157290243 0.000392946325426276 0.000210342722726136 4.02652550269931e-05 1.1521716217697e-16 8.09023064972352e-13 4.96872356558077e-13 3.97839640284969e-05 0.000732383450793599 0.000164872586874625 0.000899494449083992 3.18209476345599e-14 6.53576397974774e-13 0.000681620432634929 0.000940782877385212 0.000209594032203174 0.000276133706029096 1.99397922529388e-12 1.50973457602544e-08 0.00100350112892419 0.00139801235688 0.000163860834815654 1.34715802414279e-05 2.26618053165484e-05 9.18845034950078e-13 XM_002686086.2 BCL9 PREDICTED: Bos taurus B-cell CLL/lymphoma 9 (BCL9), mRNA. 0.0 1.058e+04 99.98 0.978326108702901 XM_005277416.1 BCL9 PREDICTED: Homo sapiens B-cell CLL/lymphoma 9 (BCL9), transcript 0.0 8843 92.59 0.999833277759253 TCONS_00172527_11 sp|O00512|BCL9_HUMAN BCL9_HUMAN B-cell CLL/lymphoma 9 protein; 0.0 1412 97.31 0.998717948717949 1 coding 1 0 0 0 -0.188780562279579 0.177058107708051 -0.015528796975691 0.741646480581807 CTCCCCCACTCCTGCCTCGGGGACTGAATGTGGGACTAGCTGGTGTCACTCCACTTTGACCTAAAAATTCCTTTCTGTTTGGGATCGCTGTGTCCCAATGTTAGAAGAGAGAGCAAGTTGGACATCTTGAAAGGTGAGGGTCACCTCTGAGACAGGGGTTCCTGGACTCCCCAAGCTCCCCACCTCCAGGATGAGCACTGCCTTATCGTGACCCTTGGGGTTTTGTGTGCCCTGGAGATGCGAGATTTTCCTTTGGCAGCCGGAGGCACACACCCAGAGAATGCTGGAGCCGCAAGGGGACAGGACCCACTTCCACAGCGGAGAAAAACAAAGAGGAAAAAGGCGTGCAGGCAGCCAGCGCTAAGGGACGCACCCAGCACGCAGTGGGCCCCTGCCACTGCCCCCAGCAGCTGTTTCTGCTGCAGCCCGAGAGGAACTCGGTGAGCCCGTCCCTGTTTGTGGCTGCAAGCTCAGGATTTCAATCAATGCATTCCAGTAACCCTAAAGTGAGGAACTCTCCGTCAGGAAACACACAGAGTAGCCCTAAGTCAAAGCAGGAGGTGATGGTCCGTCCCCCTACAGTGATGTCCCCATCTGGAAACCCCCAGCTGGATTCCAAATTCTCCAATCAGGGTAAACAGGGGGGCTCAGCCAGCCAATCCCAGCCATCCCCCTGTGACTCCAAGAGTGGGGGCCATACCCCTAAAGCACTCCCTGGCCCAGGTGGGAGCATGGGGCTGAAGAATGGGGCTGGAAATGGTGCCAAGGGCAAGGGGAAAAGGGAGCGAAGTATTTCCGCCGACTCCTTTGATCAGAGAGATCCTGGGACTCCAAACGATGACTCTGACATGAAAGAATGTAATTCTGCTGACCACATAAAGTCCCAGGATTCCCAGCACACACCACACTCGATGACCCCATCAAATGCTACAGTCCCTAGGTCTTCCACCCCCTCCCATGGCCAGACTACTGCCCCAGAGCCCACACCTGCTCAGAAGACTCCTGCCAAAGTGGTGTATGTGTTTTCTACTGAGATGGCTAATAAGGCTGCAGAAGCTGTATTGAAGGGCCAGGTTGAAACTATTGTCTCTTTCCACATCCAGAACATCTCTAACAGCAAGACAGAGAGAAGCACAGCCCCTCTGAACACACAGATATCTGCCCTTCGAAATGATCCGAAACCTCTCCCACAACAGCCCCCAGCTCCAGCCAACCAGGACCAGAATTCTTCCCAGAACACCAGGCTGCAGCCAACTCCCCCCATTCCGGCACCAGCACCCAAGCCTGCCGCCCCACCGCGTCCCCTGGACCGGGACAGTCCTGGGGTAGAAAACAAACTGATCCCTTCTGTCGGCAGCCCTGCCGGCTCCACTCCACTGCCCCCAGACAGCACCGGGCCAAACTCAACGCCCAACAACCGAGCCGTGACCCCTGTCTCCCAGGGGAGCAATAGCTCTTCAGCAGATCCCAAAGCCCCCCCGCCTCCGCCGGTGTCCAGTGGAGAGCCCCCCACACTGGGGGAGAACCCTGATGGACTATCTCAGGAGCAGCTGGAGCACCGGGAGCGCTCCTTACAAACGCTCAGAGATATCCAGCGAATGCTTTTCCCCGATGAGAAGGAATTCCCAGGAGGACAGAGTGGGGGACCCCAGCAGAACACTGGGGTATTAGATGGACCTCAGAAAAAACCAGAAGGGCCTATACAGGCCATGATGGTTCAATCCCAAAGCCTAGGTAAGGGACCTGGGCCCCGGACAGACGTGGGGGCTCCATTTGGCCCTCAAGGACACAGAGATGTGCCCTTTTCTCCAGATGAAATGGTTCCACCCTCCATGAACTCCCAGTCTGGGCCCATCGGACCCGACCACCTGGATCACATGACCCCTGAGCAGATAGCGTGGCTGAAATTGCAGCAGGAGTTCTACGAAGAGAAGAGGAGGAAGCAGGAGCAAGTGGTCGTGCAGCAGTGCTCCCTCCAGGACATGATGGTCCATCAGCACGGGCCTCGGGGAGTGGTCCGAGGGCCCCCCCCTCCGTACCAGATGACCCCTGGTGAGGCCTGGGGGCCTGGGGGCTCAGAGCCCTTTGCCGATGGGATCAACATGCCCCATTCTCTGCCCCCGAGAGCCATGGCTCCCCACCCCAACATGCCAGGGAGCCAAATGCGCCTCCCTGGATTTGCAGGAATGATGAATTCTGAGATGGAGGGGCCCAATGTCCCCAACCCGGCATCGCGACCAGGTCTTTCTGCAGTCAGCTGGCCAGACGATGTGCCAAAAATCCCAGACGGTCGAAACTTCCCGCCTGGCCAGGGCGTCTTCAGTGGTCCTGGCCGAGGGGAGCGCTTCCCAAACCCCCAAGGATTGTCTGAAGAGATGTTTCACAGCAGCTGGCAGAGAAGCAGCTGGGATTGCCCCCGGGGATGAGCGTGGAAGGCATCACGCCTGGAATGGAGATGAACAGGATGATCCCAGGCTCCCAGCGCCATGTGGAGCCAGGGAATAATCCCATCTTCCCGCGAATACCAGTGGAGGGCCCACTGAGCCCTTCCAGGGGTGACTTTCCAAAAGGAATGCCCCCGCAGCTGGGCCCTGGCCGGGAACTCGAGTTTGGGATGGTTCCCAGTGGGATGAAGGGAGATGTCAGTTTAAATGTCAGCATGGGATCCAACTCTCAGATGATACCTCAGAAGATGAGAGAGGCTGGGGCGGGGCCCGAGGAGATGCTGAAGCTCCGTGCAGGTGGCGCGGACATGCTGCCTGCTCAGCAGAAGATGGTGCCCTTGCCGTTCGGCGAGCACCCGCAGCAAGAGTATGGCATGGGCCCCAGGCCGTTCCTCCCCATGTCTCAGGGTCCAGGCAGCAACAGTGGCTTGCGGAATCTCAGAGAACCCATGGGGCCCGACCAAAGGACTAACAGCCGGCTCAGTCATATGCCACCACTACCTCTCAACCCTTCCAGTAACCCCACTAGCCTCAACACAGCTCCTCCTGTTCAGCGCGGCCTGGGGCGGAAGCCCGTGGATATATCTGTGGCAGGCAGCCAGGTGCATTCCCCAGGCATCAACCCTCTGAAATCTCCCACGATGCGCCAAGTCCAGTCACCAATGCTGGGCTCACCCTCGGGGAACCTCAAGTCCCCCCAGACTCCATCGCAGCTGGCAGGCATGCTGGCGGGCCCAGCTGCCGCTGCTTCCATTAAGTCCCCGCCCGTCTTGGGGTCTGCTGCTGCTTCGCCTGTTCACCTCAAGTCTCCATCACTTCCTGCCCCATCACCTGGATGGACCTCGTCTCCAAAACCTCCTCTTCAGAGTCCTGGGATCCCTCCAAACCACAAAGCGCCCCTCACCATGGCCTCCCCAGCCATGCTGGCAAGTGTAGAGTCAGGTGGCCCCCCACCTCCTACAGCCAGCCAGTCTGCCTCTGTGAGTATCCCGGGAAGTCTTCCCTCTAGTACACCTTACACCATGCCTCCAGAGCCGACCCTTTCCCAGAACCCACTGTCTATTATGATGTCTCGAATGTCCAAGTTTGCAATGCCCAGTTCTACCCCGTTATACCACGACGCCATCAAGACCGTGGCCAGCTCAGATGATGACTCCCCTCCAGCTCGTTCTCCCAACTTGCCATCAATGAATAATATGCCAGGAATGGGCATTAATACACAGAATCCTCGAATTTCAGGTCCAAACCCCGTGGTTCCAATGCCAACCCTCAGCCCAATGGGAATGACCCAGCCACTTTCTCACTCCAATCAGATGCCCTCTCCGAACGCCATGGGACCCAACATACCTCCTCATGGAGTCCCTATGGGGCCTGGTTTGATGTCACACAATCCTATCATGGGGCATGGGTCCCAGGAGCCTCCAATGGTACCTCAAGGACGCATGGGTTTTCCCCAGGGTTTCCCTCCAGTTCAGTCTCCTCCACAGCAGGTTCCGTTTCCTCACAATGGCCCCAGTGGGGGGCAGGGCAACTTCCCAGGAGGGATGGGTTTCCCAGGAGAAGGGCCTCTTGGCCGCCCCAGCAACCTGCCCCAAAGTTCAGCAGATGCAGCACTTTGCAAGCCTGGAGGCCCGGGGGGTCCTGACTCCTTCGCTGTCCTGGGAAACAGCATGCCTTCAGTGTTTACAGACCCAGATCTACAGGAGGTCATCCGACCTGGAGCCACCGGAATACCTGAGTTTGACCTGTCTCGCATTATCCCATCTGAGAAGCCTAGCCAGACACTGCAATATTTCCCTCGAGGGGAAGTCCCAGGCCGTAAACAGCCCCAGGGTCCCGGACCTGGGTTTTCGCACATGCAGGGGATGATGGGCGAACAAGCCCCCAGAATGGGACTAGCATTACCTGGCATGGGAGGTCCAGGGCCCGTGGGAACTCCAGACATCCCTCTTGGTACAGCTCCATCCATGCCAGGCCACAACCCTATGAGACCACCAGCCTTTCTCCAGCAAGGCATGATGGGACCTCACCATCGGATGATGTCACCAGCACAATCTACAATGCCCGGCCAGCCCACCCTGATGAGCAATCCCGCTGCTGCCGTGGGCATGATTCCTGGCAAGGATCGGGGGCCTGCTGGGCTCTACACTCACCCTGGGCCTGTGGGCTCTCCAGGCATGATGATGTCCATGCAAGGCATGATGGGACCCCAACAGAACATCATGATCCCCCCACAGATGAGGCCCCGGGGCATGGCTGCTGACGTGGGCATGGGTGGATTCAGCCAAGGACCTGGCAACCCAGGAAACATGATGTTTTAAGCTGCTAAGACTGGATGTGCCCATCCTTGTTGAGATGAGATTCCAGGTCCTGAGAGCTGCTATGAGGGCGTTCCAGGAGCACTGTTGGTCATGCAATAGGAGAACAGAGACCCAAGGGCTGCTTTGGGGGCGGGGGGAACTCGAGAATGTATGGATTTATCTGAAAACAAATTATTCATTTAATCAACAGGTGTGTTTTTTTTAAGATTTATTTTTTAAAAATTATTTTTGTGGACTTGGGTATCCCGTGATGGCACCTCCTTTGGGGAATCTGTAGCCGTGCTTTGAGAATCGCCATGGGTCACGTGTCGCACCGTTCTCTGTATGTTTACGTCCTTTGGACTTGGCTTCTCCCAGGATTCTTTTCTGGTTTTGTTTTTGCTTGGGGCTTTATTTTTTTGTGTACTGTACTATATTGTAAAAGGGATTTTAGCAGAGACTTTAGTCTTTGGGACAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTTCAGACCTTTGGACTATTTTCTTTCAACTCCAGTGTATAGAAAAACCAAACTACAACCTCAGAGCAGAGTATTAATGAAAAGCACAAAAAAAGGAACTAAGTTCAGCGAGGGGTGGGGGGAGGGGGAGATTTTTCTTTTTAAAAATAATGACGCTTAGGACATTGGTTTTTCAGTTTAAGTGCTCTCAGCACTGTCTGCCTCTCCCAGTCTACAGACCCACCTGCACATTTTTCTCTTGTTTTCCCTCCCCTCTCCTTCCCCGTCTCTTGGTTGAGTGAGTTTCCCCCTGTTGTGTCCCTCACTGGTGAGCCCCTGCTTCCCTCCTCTCTTTCCCTTTGGCAGCTGCAATACACGGTGATACTTTGGGGAAATAAATCTAAGCAAGCCTCACCTTCCATGCCGAGCATCGTCCCGGCTCCAGGAGGGAAAGGTCTGTCTTTGGGATGCTCGACTGTCTTTGCCCTTCGTCTTCTTCCCCATCCTACCCTTCCCTGCCCACCTTATTTTCTGTTCTCCTTTTATTAGGAATTCCCAAGTGAATTTTATTAATGTGGGAGTGGAACAGATGCTAAAAGCTATTCAGGATTTTGTTTTTCTGTTTTTAATTTTGTGGTTCCTTCCCTTTCCTCCCCCTCCCATGCGTAAAACGTTCTGTGTAACCTCCATTAAATTTGGTACAAAACCACTCACCAGAGCTGTGGTGTCAGAAAAATAAAATATATTGTT EMBV3_18831 CCATGAGCAACAGGGGCTGTGTCTACACCTAGAAGGCAGGACTGCAGAAGTGTACCTACA Gene GeneID:534254|FAM54A:NM_001017948:32_cdna UTR3_Alt 2 NULL GeneID:534254 9 GENE FAM54A NULL DUF729 domain containing 1 EMBV3_29631 TACAGAGCACCCATGGAAATGTCACCTGCTACCTTCGAAACCCTGTAACTGGTCAAGAGG Gene GeneID:528184|SKINT1:NM_001127316:206_cdna Constitutive 0 NULL GeneID:528184 3 GENE SKINT1 NULL selection and upkeep of intraepithelial T cells 1 EMBV3_07176 TGGAGCTGGAAGTGTTCCCCCTGGCCACTCTTAGGAGACAGACCCTTTGCTGATGAAATA Gene GeneID:532099|HS3ST2:XM_002697995:82_cdna Constitutive 0 NULL GeneID:532099 25 GENE HS3ST2 NULL heparan sulfate (glucosamine) 3-O-sulfotransferase 2 EMBV3_28956 AGAGGCTCGGTCTCTGTCATAACCGGGTTCCTTGTGTTACCTCAGCAGAAGACTAGAATT Gene GeneID:506910|SLC37A3:NM_001075284:589_cdna Constitutive 2 NULL GeneID:506910 4 GENE SLC37A3 MGC137963 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 EMBV3_10692 CCATGGTGTGTATGTCCCGAAGTGAGAGGTGACTGAATTCTAGCCATCAACCAAACTCAC Gene BVV0102_263024 + 0 NULL GK000022.2:53147118-53161299 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42615 TTCAGGCTTCCCCACATGCTTGCGAACTGTGCCTGAGCTGATCCGATATGTCACCATTGT Gene GeneID:504803|ALOX12B:XM_002695850:303_cdna Constitutive 0 NULL GeneID:504803 19 GENE ALOX12B NULL arachidonate 12-lipoxygenase, 12R type EMBV3_33092 TTTCAGGAATATCACATTCAGCAGAATGAAGCCCTGGCTGCCAAAGCAGGACTCCTTGGC Gene GeneID:521073|TIMM9:NM_001046254:71_cdna Constitutive 0 NULL GeneID:521073 10 GENE TIMM9 MGC137192 translocase of inner mitochondrial membrane 9 homolog (yeast) EMBV3_33606 ACCTGGAGTAGGTGGGTGTGGTGAGCTGCGCTTGTAGTGATGGGTGGGAGCAAGTGGTAA Gene BVT0102_042921 + 0 NULL GK000023.2:7571701-7655891 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133871 TCONS_00133872 TCONS_00133874 TCONS_00133873 1 XLOC_081241 Coding TCONS_00133871 XLOC_081241 Coding Coding BAK1 23:7653926-7658885 j TSS99901 2539 2 TCONS_00133871_3 152 5 0.488906817265026 0.000332248877649776 0.000266385078869031 0.000343855360827587 6.04815389848652e-05 0.000738921813389828 0.000161466558144835 0.000174558349511784 0.00074518037658762 0.000128486725330978 0.00161076650760535 0.000418209327992808 0.000667604319707537 1.46810887575759e-10 2.7422264887314e-15 0 0.0075492230935524 0.00249818279608525 0.0108410824541221 0.000276778322524599 0.000353938954612071 3.22806969599889e-05 0.000480651339665407 0.00919606251622861 0.004823978884625 0.000106420424661154 0.000281076710669235 0.00019965679816136 0.00348834196714039 0.000641150583523778 0.00175188188600225 XM_005223241.1 BAK1 PREDICTED: Bos taurus BCL2-antagonist/killer 1 (BAK1), transcript 0.0 3148 99.94 0.688066167782592 XM_005249254.1 BAK1 PREDICTED: Homo sapiens BCL2-antagonist/killer 1 (BAK1), transcript 0.0 1180 74.76 0.711303662859394 TCONS_00133871_3 sp|Q16611|BAK_HUMAN BAK_HUMAN Bcl-2 homologous antagonist/killer; 4e-87 258 87.50 0.993421052631579 1 coding 0 0 0 0 0.0657642789443956 0.67624390896723 0.0111970924797833 0.884567782745449 ATGGCTTCCGGACAAGGCCCAGGTCCCCCCGGGCAGGACTGCGACGAGCCTGACCCCTCCTCCACCTCGGCAGGAACAGGAGGCCGAGGGGGCGGCTGCGCCTACTGACCCAGAGATGGTCACCTTGCACCCAGAACCTAGCAGCACCATGGGGCAGGTGGGCCGCCAGCTCGCCGTCATCGGGGACGACATCAACCGGCGCTACGATGCGGAGTTCCAGGCCATGCTGCAGCACCTGCAGCCAACAGCAGACAACGCCTATGAGTACTTCACCAAGATCGCGTCCAGCCTGTTTGAGAGCGGTATCAACTGGGGCCGCGTGGTGGCTCTGCTGGGCTTTGGCTACCGCCTGGCCCTCCACGTCTACCAGCGCGGCCTGACCGGCTTCCTGGGCCAGGTGACCCGCTTCGTGGCCGACTTCATGCTGCGTCGCTCCATCGCCCGGTGGATCGCGCAGAGGGGTGGCTGGGTGGCAGCCCTGGACTTGGGGAACGGCCCCATCAAGAGCGTAGCCATCGTTCTGGCTGTGGTTTTGTTGGGCCAGTTTGTGGTACGAAGATTCTTCAAGTCATGACTCCTGGAGGGGCCCTTTGGGGTCCTGAGACCCTTCTGTGGACTTTGACCCCGGCTTCTCCTCTCACCTCCTCTCTAACAGGGGTGTCCCCCTGCCCCCCATTAAGAGCACAGAAGCTTTAGTAAGTGGGCACTCCAGCTTTGGAGCGCCCCTGCCCAGGGGCATCCATCAGACTGCTGGGTGCTCCAACATTGCATGGTGCTAACCGACCCCCTCTCAGAGTGGGGCGGTGGCCTCTCCCTTAGCTCTCTGGGACCCCCTCAGCCCTGTCTGCTCGGTGCTGGGGAGACTGATAACTTGGGGAAGCAAGAAGCTGGGAACCACTTCTCCCAAGTCGTCGTTAACGGTTTTAGCTTTTTATAATACCCTTAGGAGGGAACCCCTCCTTCCCACCACTCTGCCCAAAGCCAGGACAGCTGGGCTGTGGGGGTTAGTAGCTCTACCCTTCCCCAGAATTTAGCAGTTCTGGAAGGCTGAGCTTGAAAGCTGGGCCTGGAGCCCAGTCCTGGCCTTTCCTAAGCATCAGGTTCCCCGGGAACAGGACTGGGGCGGGGCGGGGCCAGGTGCGGGGGAAGGTGCTCCTCGGCTCCCCCCCAGCCCCTGCTACCCTCTTCCCCACCCGGCCGGCCCATACTAACTTTGCAGGTGGACTCTCAGGGATTCGGGGTGGGGTGGAGTGGGGTGCAGGCCAGAGCTCCTGAGGGCCTCTGTCCCCCCACGTTACCACTTGCTCCCACCCATCACTACAAGCGCAGCTCACCACACCCACCTACTCCAGGTGAGGAAGGGAGGGGTCTCGTCTGAGTGCACTGCCCGGGTCCCCACCTCACCTGGGCTACAGGGTTTAGGACTGCAGTTTGTCATTGTCAGGGAAAGGAGGGGTAGGGAGCGCATCTTGAAGTTTCTGAGTGAGAGAAGGGCTAGAAACACCACTAGAAACCCCAGGGTTGGGGCCCTCCCTTCTGGCCTGGGCACAGTGTAATCCGGGGGTATGCACAGGGGAACTGTGAATACTTGAACTCCGCCCCCAACCTCTACCTTCCGCACCCCACACCTGCCTGAGCCCCTCCTGATGGTGGGGTCAAGTGCCTCGTCTATCTTGCACAGCTGAGGGATTCAGAGGTCAGGGGAGAGGAGTTCTTGATTAAACCAAATGCAGGGAGGGGACGCAGAGGGAGCCGCCTGGCCACCTCCCACCCTCTTGAGTGTGTCTGAAAATAAACTGCAACCCCCACTCAGACTTGATCCCTTTTGTCTTCTCCACTACCCCTCTCTTCATCAGGCTGACTGGGGGAACCTGGGCATGAGTGACTTTCACCTGGTTTTTACTGACGGGTCTCCTCTGGAGCCTCCAAAACCCTGTGGAGGGCTGGGTGTGTTTCTCCAGCCCTCTAGAAGGCCTTGGCCCCTTCCACTAGCTACCCCCTTCTCTGGGAACTTTCCTCATTTCTTGGGGTTCCAGGCGAGTTTCCCATTCCCACAGGAAGTCAGGGGTCCCCAAACTGCTAGGCTCTGGCTACACAGCTGTTGGAGCAGCTGCCCTTGCCTGGGGACCCCCACAGGCCTGGTCTGAACTCTCCCTTCCGGGGACCACCACCCACGCTTGGCTCCACCTGGGACGCAGCATCCCGGCTCCCTCTTCGGCCTGTCCCCCACAGCTCGCACACACACAAGGCTTTTCATTCTAGGAGTTCTCTGCTGCATGGGAGTCCCTATGGGGAGGCAGCCAGGGGTGATAAAAATAACAAGCACGGAGGCGTTTAAATGTTCCAAAACCGAGGAAGTCTTTCTAGTCCCGGGCACCCTGGTCTGTTTTCTGACACCTCTCCAAAAGGGGTCACACGCAAGTCCTAAAGGACTCGGGCTTCTCTTTTACTTCCCCGAGGGCATCTTGCCAATCCCCTGGGCCCTCCGACTTCGTCTTCAGAGTCCACGTCCTGCCTGCAGTCGTTGAGAGGGGACCCC EMBV3_04490 GCTCCATTGCGATTGCTCTCTGGTCACATGGGTGTCCCAACTTCTAGTTATGTCCCTACA Gene BVV0102_231478 - 1 EMBV3_28397 GK000007.2:44565353-44591314 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28079 CCTTCAACAGATAGTGAGCTCTCAGTTGCCCCTCGCTTCCTCAGACATAAAGTCAGTAGA Gene GeneID:531979|WFIKKN2:NM_001076885:126_cdna Constitutive 0 NULL GeneID:531979 19 GENE WFIKKN2 MGC139299 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 EMBV3_09586 GCTGCCTAACCATCTCATCCTCTGCCTGTACTTTTCCTTTTGCCTGCACTTCTGAGTGAA Gene GeneID:538634|CTHRC1:NM_001081536:41_cdna Constitutive 0 NULL GeneID:538634 14 GENE CTHRC1 MGC148866 collagen triple helix repeat containing 1 EMBV3_20757 CTTAGGGCTGGTTTAGGGAATTGGAGGCTAGTTTATTCTCACTGACTTTGGCCTGGCTGG Gene BVV0102_154774 + 0 NULL GK000024.2:47397359-47971044 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140447 TCONS_00140445 TCONS_00140446 TCONS_00140448 1 XLOC_085132 Coding TCONS_00140445 XLOC_085132 Coding Coding SMAD2 24:47960512-48022066 = TSS104827 12575 1 TCONS_00140445_2 467 0.0362624254473161 10 0.795866976426819 0.000558461629198207 0.000842954955141014 0.000541001447274662 8.37476728025186e-07 0.00030108326676115 0.000187685955412416 0.000453222965608471 0.000511530980983242 0.000785695319591274 0.000116026735605745 9.25514446683768e-05 4.16243959586503e-06 4.58527237556821e-09 0.000222767220812889 3.768208690246e-05 0.00207312508118285 3.37664975683589e-09 4.19051634265806e-19 0.000664411800440604 0.000789186153929672 0.000427389046057371 3.100090488712e-20 1.72315481223898e-11 0.000103252638043607 0.000885032436150529 0.000549995092727025 0.000335270457424984 0.000233478344753441 2.33579267751586e-05 0.000339456743689977 XM_005224172.1 SMAD2 PREDICTED: Bos taurus SMAD family member 2 (SMAD2), transcript 0.0 1.631e+04 100.00 0.7189662027833 NM_005901.5 SMAD2 Homo sapiens SMAD family member 2 (SMAD2), transcript variant 1, 0.0 4533 81.48 0.364771371769384 TCONS_00140445_2 sp|Q15796|SMAD2_HUMAN SMAD2_HUMAN Mothers against decapentaplegic homolog 2; 0.0 974 100.00 0.997858672376874 3 coding 0 0 0 0 0.02872344271237 0.843955292048258 -0.0285417485640642 0.577413358513925 TAGGTTAGATTAAGGAGGATATTTTCTTAGAGTGGACCACCGCTTTTGGTAAGAACATGTCGTCCATCTTGCCATTCACTCCACCAGTTGTGAAGAGACTGTTGGGATGGAAGAAGTCAGCTGGTGGATCTGGAGGAGCTGGTGGAGGAGAGCAGAATGGACAGGAAGAAAAGTGGTGTGAGAAAGCAGTTAAAAGTTTGGTGAAGAAGCTGAAGAAAACAGGACGATTAGATGAGCTTGAGAAAGCCATCACCACTCAGAATTGTAATACTAAATGTGTTACCATACCAAGCACTTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGATCAGTGGGATACAACAGGCCTTTACAGCTTCTCTGAACAAACCAGGTCTCTAGATGGTCGTCTTCAGGTGTCCCATCGAAAAGGACTGCCTCATGTAATATATTGCCGATTATGGCGCTGGCCTGATCTTCACAGTCATCATGAACTCAAAGCAATTGAAAACTGCGAATATGCTTTTAATCTTAAAAAGGATGAAGTATGTGTAAACCCTTACCACTACCAGAGAGTTGAGACACCAGTTCTGCCCCCGGTGCTGGTGCCCCGGCATACCGAGATCCTAACGGAACTGCCCCCTCTGGATGACTACACCCACTCCATTCCAGAAAACACTAACTTCCCAGCAGGAATCGAGCCACAGAGTAATTATATCCCAGAAACGCCACCTCCTGGATATATCAGTGAAGATGGAGAAACAAGTGATCAACAGTTGAACCAAAGTATGGATACAGGATCTCCAGCAGAATTATCTCCTACTACTCTTTCCCCTGTTAATCATAGTTTGGACTTGCAGCCAGTTACTTACTCAGAGCCAGCGTTTTGGTGTTCAATAGCATATTATGAATTAAACCAGAGGGTTGGAGAGACCTTCCATGCCTCACAGCCCTCGCTCACCGTAGACGGCTTCACAGATCCATCAAATTCTGAGAGGTTCTGCCTAGGTTTACTCTCCAACGTAAACAGAAATGCTACGGTAGAAATGACAAGAAGACACATAGGAAGAGGAGTGCGCTTATATTACATAGGTGGGGAAGTTTTTGCCGAGTGCCTAAGTGACAGTGCAATCTTTGTGCAGAGCCCCAACTGTAATCAGAGATATGGCTGGCACCCTGCAACCGTGTGTAAAATTCCACCAGGCTGTAATCTGAAGATCTTCAACAACCAGGAATTTGCTGCTCTGCTGGCTCAGTCCGTTAATCAGGGTTTTGAAGCCGTGTATCAGCTAACTAGAATGTGCACCATAAGAATGAGTTTTGTGAAAGGGTGGGGAGCAGAATACCGAAGGCAGACGGTAACAAGCACTCCTTGCTGGATTGAACTTCATCTGAATGGACCTCTACAGTGGTTGGACAAAGTATTAACTCAGATGGGATCCCCTTCAGTGCGTTGCTCAAGCATGTCATAAAGCTTCATCACCAATCAAGTCCCATCAAAAGACTTAATGTACCAACTCTTCTGTCATAGTATTTGTGTGTGGTCCCCGTGGACTGTTTACTATCCAAAAATTCAAGAGAAAACAGCACTTGAGGTCTCATCAATTAAAGCACCTTGTGGAAGTGGTTTCCTATGTTCGAATATTAGATGGGAAAATTAATGTCTAGAAATACTCTCCCGTAAAGGAGGAAGAGAAGATTTTAAAGACTTACTGATGTCTTGTTGGGCATAAACCTGAGTGTCCCAAAGGTTTATTAATAACAGTAGTAGTTATGTGTACAGGTAATGTATCATGATCCAGTATCACAGTATTGTGCTGTTTATATACATCTTTAGTTTGCATAAATTAGGTGTGTGTGTGCTGCTTCTTGATTTAGGCAAGCCTTTATAAAGTTACAGTACCTAATCTGTTATTCCCACTTTTTTGTTATTTTTGTGTGTCTTTTTTAATATATAATATATATCAAGATTTTCAAATTATCATTTAGAAGCAGATTTCCCTTGTAGAAAAACTAATTTTTCTGCCTTTTACCAAAAATAAACTCTTGGGGGAAGAAAAGTGGATTAACTTTTGAAATCCTTGACCTTAATGTGTTCAGTGGGTCTTAAATATTCATTCTTTCTGTGTTTGTTTACTTACTGCTAAATCTCATTATAAGGAAACTTTATGGAAATCTTTCTAAACCTCTCCTCCATTTCTACTTTTCCACCAAAACAGTGTAGCATGACATCCATCACCATCAATGGTTGAACTGATACTGCCAGCACCAGTTAATTCTGAGTACAGTGATAATTCATATGGAGTAAGTCCCTTTGTCTTACACCAAATTTCAGTTTCAACAGGTAATAAGAGACTTGTGTAACCTGGCAGTCTTTTGATTTATCTTTACACCTCATAAAAAATGCACAGGTGGCAGTATAATTATTTTCAGGGATATACTGCAATTACTTCAATATATTTATCCTTTCTGAAAATTCAGTCTAAGAATATAAACCCCCTTTTTAAAAGATACTTTCAAATATTTCAGTAGCAAACCTCTTTTGAGTTGAATTTCATTGGATTTAATCACCAGACTGTATTACGAAATGGACTTTTGTAAATGTAATTGCTTCGGCAGAATACCTAGAAAAGTGGTGCTGAGGTCTGATCAGCAGATAGGGGCCATCTGTTTTTAAGGTATGTTGTATTAAATTTATAAAATCTATGTTATTTTACATAATTATGAATTCTGAATTGTAAAATTTGGGGGAGAAGCCGTTTAGCAAGTTTTTTATCTTATGAATACCTGTGGTCTGAGCTGTTCTTAACTAATCCTGAATATGTGGTGACTGTTAGAAGCCACCATACTTCATGCTCTGCAGGGACAGGCACGACCAGAGGTGTCAAAAGCTCTGTTGGAAGTCATTCTACAGCAGATAATCCTTATTTTATTTAGTTTATTGTTAACTCATTCCAGTTTAAACTTTTCTTGTTTGCATCTCAATAGAAACAGCCAGTAACCACTCCTGGTCCCTTTCTAGTAAGTTTTCATATTTTTAAAGACAGATTTTCTTTGGTTGGTACTTGTGTTTTATAACCACATTCACCTGTATGTACAGGTGTTATTTTCAGTACTTTCCGCATTTGATTGTTTTCTGTCAGATACTCCGCGTTTTCCTATGTTTGTATATGCATGTATATGTTCGTGTAAACTTGGTAGAGTGGTTTTTCGTTCTACAGATATTTATTGTTCACCTGTTACGTGTGCCAGGAACTTTCTTAGCCTTTGGATAAAGGTGAACAAGACAGCTGTGGCCCTTACCTTTGCTGAGATAGCAGTTACTCTAACAATTAGCGTATTTGTCTATGAAGGAGATAAACAGGGGGCTGTGATCGAGCAAAGCAGAGGGAAAGCTTCTGTAATGTGATGATTGAGCTAACACGTGAGAAAGGAGCAAGCCATGCGGAGAGCCAGGGGAAAATAGGCATTCTTGGCAAAGAAAATGGCATCAAATGCAAAGGCATATTTTAAAGGAAACTCATCACTTATTAGGTGTTTATGCTTTATACAAAAACCTCTTCACAGATCCAAACTTGAGGATCAGATTGGTCTACAATTTATAATGGTGGCCTTATTTTGTAATGGACTGCTTCATGTGTCATTCTTGTTAGTGTTTCCTCTTCTTCAAGTCCTTACTATAAAAAGCTTGCACCAGGTCACTACCATTTAATGGAATAACCCTTTCTTTAATTCTGCCTTGGGCAAATTTTCACCGTTGTCGCAACTGCCTGCTTGCTTCCAGACGTCCTGCTGCCCACTGATCACTACTTGTACAGCCCGTCTTGTGGATGGTATAAATGTCCCAGGTATCGCCACCCTCAGACCTGTTGAAAGTGTGGAGGCTCTGCCCTTTGTAGTTGGGAAGTGATGTTAGGGAATACTGTTCCTTGTCTGGGGTCAAAGAACAACTCAAAATGGTGGAAAGTCCTGGCTGTTACTCTTGCATTGGTATGTTCAGCAAAGCAGTACCGTCTGTAGCATTTCAGTAATGGATCACGTCTCTACAGTCGTGGTGGGATTCTTCTACATAGTATGAAGCTGGGACTCAGCTCTTTGGAAGCCCCTATTGTATTCAGTAGTTAGCAGTTGACTTGATGGTGGGGGTGGTTACATTTGTATGAATATGTTCAGTGGTCTTAATCTGCTTTTTAATGAGATGCTGGTTTTGCATTTTGTTTTGTCCACTGTGGCCTAATTTTTGCTGATTGTTTTTTTCCTTTACAGGGTTTGTTTTCGTTCTTCTAAGTGATACGATCTCCTCTTTGTAGAATTTTGTCTTTATTTAAATTAGCAACATCATTTAGAATTTCTTCTACACAGTGCTGGTAATGTCCTCAGTTTAACAACGTGAGAACTGAAGGATCATGCTCTCTATCACATTTCCAAAATAAATGGTGGTTTTCACACTGGATTACATACATCTTAGGGCTGGTTTAGGGAATTGGAGGCTAGTTTATTCCCACTGACTTTGGCCTGGCTGGCCAGTGGCAGCTTCATTTTTATTCTGTATTGGAGTTCTACATAGATTTCTTTTTTTTAAAGTTTCACTGCTTAATAAAAGGTTGACTTTCCTGACTGGGTTTGAACTACACCATACTAACTAGTTGTAATTGTGCGTTATGATATACCTTCATTCAGTGAACACTTACTGATGCCTTTTCTTTACCCAGCCAGTGTGACGTTGAGTGGTAAGATGACTGGGATTTGGTACTGACTCTTAGTCTTGTGGGGGTTACTTTCTCCCTCAGGACCTGTCACTTTGTCAGAAGAAGACCTGCCTAATTTTTCTTGAAACCTAAATATTCTTGTTCTGTATTCTTATTCTGTATTCTGAGTGTGTACTTGCAAGTTGTTAATATCTAAGGTTTTTTTTTTTAAACCTTAAATCATATTTAACGTTTTTGCTTACTTCATCTGTTCTTTAGACATTGCCAGATTTTCTTCTTTGTTAAAATTATTTTAATTTCACTTTATTTGTGCCTTTATTGTCAGTTTCATCAAGACTAAGATTTTGAAGGTGAAAAACAATCAGTCTAGTCTCTTGCTAGTTCAAATCAAATAAAAGAGTATATGTACCCAGTTCGTTTCTCTACCTCTTCCAAAAACTGTCCAAATATATCTTTCACATCTTTAAAAAAAAAAAAAAATTAAATACTTTGAGCATTTATTCAATAATCAGCGCCTTCCTGGTCTGGTTGATGGTGGGATGTAATATAACGCAAGACAATCCTCACTGTTCTTAACATCTGTCTTTATGTACAGTCTTGACTTTCATAGCTGAGTGGTTCTGATTCACAGATTGCTGCCCCTCCACCATTCCCCCAGTATCTCTTTAGATAATTAAGTAGTCTGTGGACATAAGCAACCCATGATCTTGTCTCTCACTCTGGTGCAACACGTTGAGGTTTAGACATAACAAATAACTGCCTATTTTCTTTCCTTCATGAACTTTGTTTTACTGAGCCCTTTATATTCCTCAGCTGAATTTCTTTCTTGCTTGCTTCTCTTGACAGCATGTATCCCTAGTGGTTTTGCTGATTGCCCCCTTCCTTTCCAACCATGTTTTATCTGCATACATCAGAGTGTTTCTATCCTTTGAACTTTACTAAAGACCAAAAAGGATGGTGCTGTTCACACCCAGGGTCCTAACTTTTTTCACCACGAAGGTTGATGTTCAGATTAGTTAAGTCACTTATAAGTGGTTCAGAAATTCTGTCCAGTTAAATATGTGTGGTGTATGTGTGTGACGATCAAATAGCATGAATCATCACATTTTGTTTAAATTGTGTTTAGGATTATGAACTTTTCTAGCAGTTGCAGCCAATAATTTCCCCATAATACCAGCCCACTTTCCACCTTGGAGCATATTGAGTTGTTGTGTTTAGTACAATCAAGAGTAATAACAGTAGAGTGTGGTGTCCAGAGGTTGTCAGAATTCTGTTGAGTTCTTTTTAATATCTTCCATTTCAAAGTTTTTATAAATATTTTGTCTGTTCAGACTACCTTTTGTGTGTGGGGATCGAGGGGCAAATTTTATCTTGGGAGTGGAATTCCTGTGTTGGGAGCCTCAACCAGGAAATGTGAGCTATACTGGATACAGATAGCCTCATGATCGCTTTTATGATAAGTTGTCTGATGTGTTCACATAATTTTTGGGGTAGGAACTGTTTTCTCTTGGATATTATAGCTAACTTTATATATAGCATAACTGCCTTAAGTCTTTTTAGTAGGAAATAAATTACATAATGTGTATGTATGGATTTATATATACATATACACTCGTATAAAAATCTTAACAGTAGGGGTTGTCTGCACACATTTTAACAGTATTCAATGATTTTATTTGTTAGATCTCAGTAAAAAATTCCTAAGTTGGCTTGCAGACATCTTCCTTTCATGGACAGACCATCAGGGTAAATTTTTTATTCTGCCAGGGTCCTAATTTGGTGGTTCTGTTAGTATGCCATTTTTAGGCAGCTTGACAATTAAGAATCAGAACTGAAACTGACATAAAAAAAAAAAAGCTCTTGAGTGGTCTCTGTGAAAGGTACTGACTTCAGATTACATAAAAGATTTTTTTAAATAATAATGTTAGGTTGTGTGCCCCGGGCCCCTACTCTTTTTCCCCCTGGCATAAGACTGCTGCTTTAGATAACCTGGGAAGTACCACTACCAAGTCAAGTTTTCTGTAATTAAGGATAGCCTAAAGATGACTTTCTTAGCTGTGCTCAGCAGAAATGAATTTTCCAAGACTCTCTGGGTCATTTCTGATTTACAGAGGATCTGACCAGAGTGTATTATTAGCCTGAGTTAACTTCAGTGTCTGTTGGTTCACTGCCATGAAATCCTCAATAGACCCAGATTTTCACCGTTGGTTGAGATGTAAGGGCCCTTTGAAAGAATAATGCCACTGATGAAGGAAATGAGTATTCATTAACTCCACACAAAGGACTTCTAGATTTTTCTCCCCCCACCCCTGATTATATTCTTCTACCCTCTTTAAAAAGAAAAAAAAAAAAAACCTCTTACTCTCTCCAGAATTTCCAGTCTGCTCTTTTGCAGGGTTGGGGTGGGGGGTGGGCGGGGAGGTGCGGGTGGTGCTGGGAAGGGTTTTACTTCCTTTTCTGATTAAAGATGCTTATTTATTGAACCGTGAAATTCATAATATATTGATTTAAGGACAGAAGTGAAGTTTTAGAATTGTAAAAATACTTAACTATTATATATTTTTCATTTCACACTTGACAGTTTTTTTTCTCCCTGTGGCTTTAAAGCTTTTGGCTGTTTTTCAGTGTTAGTCTCTAGGTAACTTGCTGTATTTCTGGTTCTGTATTAAGTCCTGCCGTTTACAGTGCTGTGGCATAAAGTTGGTTCTCAGCATAGAAGTCTTCCTAAAGTCTTTTTCTTCCAAAGAGATTTTCCTTTCTCAGTAATTCCTAAGATGATACTTGTTTGTCACTTTCTTTATTCACATTCTTGGATTGTTCAAACAAAAAAAATTGTTGGTGAAAAAGATTAGGGTCCTTTTCTGATGAATGTATATGTACCTGCATTAAGAATGTAGTCATTTGTTGGTTTTATGTAACTAGTATATACACAGATTAAATCAGGAGAAAGAATTATCTCATACATAGCATGTAGGTAACATGCATGGATTTTACATTTTTTAAAAATACCCTATTTTTTTGGCAAAATGTAGAACCGAAAATGGTCATTTCTTAGACCAGCTTTACCTCAGGCTTCATTTTTGCTGTTTTGACCCTGGGCCTTTAAGGCATAAATATTTATATCTTTTTATTACTGATAGTGAAACTGTGACACTAACCATTTCTGTAATACAAGACGGCAAAACAAGAAAAACTATAAAGATTAAGATGAAAGCAGTTGTGCAGTTGATGAACTAGATCATAGCGTTGTAGGCAAAATAAAAATGTGCATATCTGAGAATATTTTTTTTGCCGTCTCTCCCCAAGGCCAGACCTTCTGGTAGAGCACAGTTAAAAGTAACATAATTCTGGGCCTTTATAATCTGAGGGAAATGGCTCCAGTTGGCAGTCTTCTTGTTAACATATGAAGCCCAAACGTGGGAAATGGTTGGCAAAGAATATTTTCACATAAAAAAAAGAATATGAAAAGATATAAAACTGGATTATTCATTTAGCTCTGAAAAATCTCAAAAAGATATAGTAAAATACTATATAACTGGACAAAACCTGAAGAACCTATAGAGGATTTATGTGAAAACAGGCTTCAAGGATGAACTGTTACATGCTCACCAGTTTGCTTAAGTTCGATCAACCTTTTCTTAAAGTAAGATATTTGTGGACTTCTAGGAACTAGCGATTAGCAGGTGTCCTAAAAAGATTTTTGAGCTGATTCCCTCATAAGTAGCCCTATATGCTCTTGAAGATTCTTACCCTTCCTCTAGTGATCCTAAGGGAGGAATGAGGAGTGCTCTTTAGGGTGGCAACCTGCCCTGGCATGTCTGGGACTGAGGTGGTCCCCTTGGATGCAAAACTTTGTGAGTGCTAAACCCAGGAAAGCCCAGGCCCACACAGCAAGGAGGAGCTGATAGCCCTGGCTATTCTTGTGACTTAACCTCACCTTAAACATTGTACTAGTTTCAATTAAGTTCAATTGCCTTACGGCACGTGTCCTCCGGTCACTTATTACTGTGGATGGAATGTGAGATTTAAGACAAATAATAGCTAATGGCACCAACGTGCTCTTGGTAGTGAGACTAACAGTAATCCAGGAAAGATACCCGGTGGTTGAATGAAACAGAAGAGGCAACTAGACAGTGAAGTTCTTCAGAACCTGTGTGTATATGTAAGTACAGATCATGTCTTTATGGGGTTAAATTATTATATCTGAAATTTAAATTCTCATGGTAAAAGAAAACTGAGGAGCGTGGATTTTTTCTCTCGAGGAAAGATACGGCCTTTGATGCTCTATCTTCTGCATTCCCCAGACTGTCCTGCTCAAGAAGCCAAAATGTGGCATTTTTATGTTTATTCTCAGTGAATGTCGTATTGTGATTACTAAATGCATCAGCCAGGGGCAGATCAAGGAACTGGTGTTCTGATCCACTCTGAGCAGCACCCTCAGTTCTGATAGCCTCCTAGCCCTCAGGTGCTTGCCAGCTATGACACCGACACGGGAGGCAAGATTCCTCTAAGACGGCATTGATTTTGTAATGCAATATGAAGGGTGCAGAGTCTGTTCTTGTTCCCCTGTGGTAGTCTGCAGACTGCATCCTCTCTGTGCACTGTGATGTAGACGGTAGATGTGTTCTTTGTAAGCTTTAATCCTATGATTGTCAGAAGTATGATGTGGTTCCATTTTTAAAAAATTAAACAATGAGCTGAGGCTTTATTTCAGCTGGTTTTCAAGTTAAAGTTGTGAAATATTGATTTCCTTCCCTCCACCCACACCAAATACTTTAGTCTATTTAAAGTACAAAAAAAAAAAAAAAAAATAGTTCTACTTAAGAAAACATTGCTTAAATGTCCTGTGATTTCTGGTCAAATTTTATATATTTGTGTGTGTCTGTATGTGCTTTCACTTTTTACCTTGTTGACTCTCTACCTGTGTTAACAGTACTGTCACCATTGAAAGGTGAACATTTTTCCTAGCATTAAAAAAAAAGCCATTTGAGTTGTTAACCATGTTATTATGGGACTAATTTTTTTATTGTTTTTATTGATCTTAATTTAAACTTATTTTTTAAAGAGGGGATTATATTTTGCTGACCACACTCTAAATTATATGGAAACAAAAAGTTTTGTTGTGTGTATTTCACATAATGGAATTATGCTATTGAGTGACTCTTTTTATTTTTTAAGTTTGGTGTTATATGAAAAGTTTATCCCACTCCCTTGGCAGACAGATACACACTGCTTGGAATAGACGCACACAGCACATACCTCACAGAGCTAGCTGATTAAGCATTTTAGTTTATTTCAGAGCTTTCCTGTGCCAAACTAATGATCTGATACTCATGATTGTTCAGTGAACAACAGAATAGAAGGTGAAATTCACATTAACTCTCAAAATGTACTCTTAGCAAAAAAAGCAATTGGTATTTTTAAAAGACTTCATTGAAAAATAATACATACTCATAATTGTATCATTGTTATGAAATAATTGAGAAACAAACTTTTTACATCAACCAGACTTTCTTTGTGCCTTGCAAGAGCTCAGTTCCTAGGATGAATCAATACTTCTGAATCGTTAGCAGACTGTTTATTTCAGACCATTTAAGACGCTTACTTTAGGATGTATCAAAAAGGACTTCAAAAGCTAAAATGCACTATGCTACTTGGTACCGAAGAGCCCAGAGACTAGCTTGATTTTGTTAACAATTTTGTATTGGTAGGAAACCTACTTAAATCCTGCCTAAATTGCTACACCATACAGCTCTATTAATTTAAAAGGAGCCATTGATTTTCAGCATGACTTCAGTTGACAGATGACTAAAACAGATCCTTTTCCTGTCGTCACTTCACCCTGGGAACATCCCTGCGTGTTAAAACCTACTGATAGCGATGCTGGTTATCTGCACCATGAGATTTTTAGGACAAACCCCCGTGTCCCTAATTGCACATATTCAGTGGGCCGAAGAGTAGGAGAGAAGTATTGTTTGCATGTTTGGGCTTTCTCCACATTTGGCAAATGCTTTTATCCCACTTGCTTCAAAACAGATCGAAAGTCCTAGTGTGGGAAGCATGCCTATTAATATCAAACAAATGTATTTCGGTGCACTCCTTCTCGGCACCAGGTGTGCCCAAGAACTAGAGTGAAGACCACATTCGTCTGCTGCTCAAGAATATATGTGTACCATGCAGTTGTCCAGCTTCTTTTTAACACACTCTCATCCTTTTCATCAAAGTAATACAAGATAAGCCCAACCTAAAAATTAGAAGTTTGCCAATGTAGGAGTCCAAAAGAAAACAGCATATATAAAAGCTGTTTGCTGCTGCAGTGAATAGATACTGAGATGCTAGTTTGCATTCTTAAAGTCAACCACATTGACTGAGGGCAAGAACATTGAATCAGACTTACAGGTAGCAAGTTTGTGATAAGACCACATGATCTTTGGGAAGGTGCAAGAGAATACAGAGTACTGTGTCCGAGTCCAAGCTACGTGACCTTATTGGTTGTTACAGAATAAATGGAGTTTGGGATACGTATCTGCCGTAGATTTTACAATCTTCCATTTGTTGTTGGCTGCCTTTGCACCTATTAATACCTAATAAGATTGCTTAAAAAGTAGTTTAGGAAAGAAATAATATCACAAAGAGATGGAGAGGACTTTTGGGGCCAGTCAAAATGAGATCTTGGAACAGAACTTGTGAATCTGAATGTGCATGAAAGCTGGGCAACTACTGAACCTCTATGTGTGGTGAGCAGGAAGCTGACAGCCACGAGCTGGGAAGGTGCTACTGCGAAGCCCGCACCTAATAATAAAACCTAGATAGCCAGGAGGTAAAAGCCATAGCTAGCTCTACACCTTGGGTCTCCATCTGTATAGAGACTGTGCTGCTGAGCTGGCTGGCTGGAGGACATGAGAACACCAGCCATAGCCCCAGCCCAGGATGGAGTGCTTGTTTAGGGCAGGGGGAACTTAAACATGTACATATACATGTGTGTGTTAAGTGGAATTTAACATTTTGCTCACAGCTGGAGAGGATTATAGAGAGCCCTCTGAGATTTTATGCAGAATTTTGTGTATGTATTTTATGCAGATTCATGGTGAGAAGTGGTACTCATCAGAGAGGCCTTACCTACTGCCCAGCAGTGATTCCATTGAGACCACCCATCTTGAGCTTAGAATTAACTCTAATTTTAAATCTTGTTTAAGGGTTTTCTTTTCATGAGAGATCTTGACTCTGAGTGATATTAATTTCTTCTTGGCAGTATTTGATCACAGTATTTTAAATATAAATGCTACGTAAATAAGAATATAATCGATGACTCACTTTGAAACAGTTTTCATTTTTGAAGTATGTTTGGGCTGCAGTGGAAAAAAATAATTTTCACAGGCCCAGCTTAACATCTGGAATCAAAAGTATTCTAGGTTGCCTTTTTATTGGGTTGGCCCAAAAGTTCGTTCAGGTTTTTCTATAAGATGTATTGAAAATATTTTTACATTGAAAAAAACAGAGTCTTTGTTTCACGCAAGAACCACAAGCTACTTCATTCCAACTTTTAAATCAAGATCTTGAATAATAGCGTGTGGTATTAACACATTTTAAAAATGTACTTAGTCAATCACAAACACATTTTCTAAGGAATTGAATTTTATAGAGATAATTGAATGCTTTCATCTGTAACAGAATTAGTGGCCTGCAAACCACTGTGGTTTCTTGCTTTGTTCTGAAGTTGTTAAAGGAGGAATTTTCTGCTCCAAGTTATATGTATAAAGGAAGTACGATGCAAAGTGAAATGCAATTTTTAAATTCTAAAGCAACAGCCACTGACAAGATGTCCTCTAAAAGTTTAACTACTTTTTAAACTAAACAGATATCATCCCAATATCTAGG EMBV3_34759 GAGTCAGACACAGATCCGGAAGATTCCCAACCGCTACAGCCGCAATCAGTTGACCAAACT Gene BVT0101_003191 + 0 NULL GK000024.2:4325744-4413369 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139711 TCONS_00139713 TCONS_00139714 TCONS_00139716 TCONS_00139712 TCONS_00139715 1 XLOC_084968 Coding TCONS_00139716 XLOC_084968 Coding Coding LOC100848078 24:4369218-4395941 j TSS104439 2055 1 TCONS_00139716_2 659 12 0.923546141755857 0.000164765511164375 0.000100737738784301 0.000329439986836077 5.16049775899667e-15 0.000737510458861405 2.61095947663234e-05 8.0646784469902e-09 0.000210224006066861 9.84390887465981e-11 7.99556538792833e-12 1.49605807120122e-13 0 1.57102224828705e-13 0.000334200682016087 1.16155871123664e-05 0 0 0 0.000201621263757676 9.97917433313767e-05 0.000269519924442921 0 0 0 0.000295452776955133 0.000445655352711136 7.98321387995099e-05 0 1.43862223201464e-14 1.18507241176689e-10 XM_003583950.2 C24H18orf63 PREDICTED: Bos taurus chromosome 24 open reading frame, human C18orf63 (C24H18orf63), mRNA. 0.0 3207 100.00 0.864720194647202 NM_001174123.1 C18orf63 Homo sapiens chromosome 18 open reading frame 63 (C18orf63), mRNA. 0.0 1510 78.91 0.862773722627737 TCONS_00139716_2 sp|Q68DL7|CR063_HUMAN CR063_HUMAN Uncharacterized protein C18orf63; 0.0 843 65.40 0.993930197268589 0 coding 0 0 0 0 -0.0759254600423888 0.510497578904717 0.0422838338162703 0.443336206324977 GAGAGCTGGGGTACGCTGGGATAAGTTGGGGCCTGATTACTGGGGCATTCAGTCAACAGGAAAATATGAATGATTCTAAGCAGCAGTCACTATTCTTCATCACACTTCCTGATTTACACAAACTCTGTGCTGTCAAGATAATATTGAGTAACGGAGTGGCAGGCACTGAGATTAGGAGTAGACAAATGAAGATATGCAGGCAGTTGCTGTTTTTGCACCAAGATATCCTTACATCACCTGTACCTGGAATATTTACCCAAATCTGGGCGGTGATGGCGGTGGAGGCTCCACAACAAGTAATTCCTATAATTCTTCAAAACTGCCTTTCATATTCACTCACGGCTAGACTTGCTCCAGCCTGGAATAAAGCTGGCCATCTCTTGATACAAGGAAGAGAATTTCTTTCTCAGATGGGAAAGCAAAGTGCTGTTGTGTTAGATATCAATGTAACATCAACTCAAGTTTGTCTAAGCATAGAAGTTCACACAGTCAGACTGCCACCACCTCAGCTAAGAGAATTTGATATTTCTCAGAGTATTATAAAGAGTTTTGAGACTAACCAGAATGCTGTTATTGAGGAACAGTCCATTTTAAGCAACTGGTGCTACGTTTTGCCAAGCATGAAAATGGGACGACTGATAAGTATTCTTCACACCATACCCCCTGACTGTCCTTTTCACTCGTATGAAGATTTCCAGATGCACTGGGATGGCCTGTATGGTTATAAGCTTCCAGAAGACCTTGGAACTATTAAAATATACTGCTGCATCTACTTCAAAATGATAGGAGAAAGGCTCTTCACGTACCCTCTCAGTTGCGTCAGAAGCCAACCCATACAGTTCTTTCCAAGGGTAGATATGGAAGGTGTGCTGAGAAGTTTTCTTTCAGATTTAAAATCTAAGCTGCCCCATATATGTGGATTTCCCATAAAGATGACAACTAAACCGTGCTACTACACACAAGAACTAACCACACTGCATTTGCAGGGAAACAAAGTCAAGCCGCCCAATCTAACTGCTCAAGCCAAGTCCTCTCCAGCTCACACCCCTTCCACAAGAGCCGCCCGGGCCCCGAGCTTCCCGCCGTGCTCAGCAGCTGCGGGCCACAAGGGGGCGCGCTCGGTCAGCCCGCCGAAGCCCTCGGGGTCCTCCGCTCTGCGCCTCCAGCCAGAGTCTGTTCTGAGCAGCAAGAAAGCGCCGTCTGACCAGGCCGCACAAGTACTGGAAGTACCCAAGCCCACCAGAGGAAATGCTCAAGTTCAAGACACAAACTTTAGCTCCCAACATAATATTGCCCCTAGATTCATACCAGTTTTCAAAAGTCGACCGCTACAGATGACCAAAAGTATCTTAGCACCTGAGAACCTGAGAAGAAAACGTGTTGATACAGAATCTAAGTTGTTTTCACTGAAATCTAGTGAGATCCAGGACGATAAACCAAATGTAGATCCAACTACTAAAAAAAGACCTAGTCATAGCATTCAGATGAAGGCTAAAAATCTGAATCTCAAGACTTGTAGATCTCTGCAAGAAAAAAACACTGAATCCTATGGAAATATGACAAAAAGTCCCCTTTCTAGTGGAAAATCATTGATCACGAGTTTAAGTGAAAGTAAACAACTGTCTAATAGTTCAGTATTTCAGATGCCAACTAGCAATTTAGATGTACTAAAAAGTGCTGTTGGCTCCCAAGTGAATGGAAAAGAGAATTTGACAAGCAAATATATAACACAGGTTTTAGGGAAAAGCCATGAGTCACTAAAAGTAAAAAGACAACCACATATTTTTGAGTCAGACACAGATCCGGAAGATTCCCAACCGCTACAGCCGCAATCAGTTGACCAAACTAAAGAAGCTGATGTAACTGACCGCCAATTAACAGTAAGCAGAACAGCCCCCAAGTCTAAGAAGTTATGTCAGGACTCTCTAAAAACGTCAAAGAAGCCTCACTCCAATACTGTCCTTTGTGGACAATCCCGTGCTAGGAAACAGATACATCACTTGGACAAATCAAAACCCAAGAAGTCTCTCATTCCTAAAGCTTAGGACATGGATG EMBV3_23163 GCAGATTGTTGATCCCTGTACTGTCCCCTCTCCATCCCACCCTGCCTTGATAGTAGCTTA Gene GeneID:100125224|PIP5K1A:NM_001103109:2_cdna Constitutive 0 NULL GeneID:100125224 3 GENE PIP5K1A MGC159892 phosphatidylinositol-4-phosphate 5-kinase, type I, alpha EMBV3_07493 TACTCGGTGATCATGAGACCCACAGTTTGCCTCTGTCTGGGAGCCCTGGTTTTCTGCTCC Gene GeneID:519492|LOC519492:XM_002688602:361_cdna Constitutive 0 NULL GeneID:519492 7 GENE LOC519492 NULL similar to mCG52335 EMBV3_30626 CCAAGACACTGTGACCTTCCAGGTGGCCGAGGTCCCGATGCCTAGCATACTCAAGAAGAT Gene GeneID:514770|NR0B2:XM_002685759:543_cdna Constitutive 0 NULL GeneID:514770 2 GENE NR0B2 NULL nuclear receptor subfamily 0, group B, member 2 EMBV3_25061 TTTCCATCAGGGGAAAGGCAGCAGTTCAGGGCAGAAAAAGAAGCCCAGATGACCGTAAAC Gene GeneID:541078|MAT1A:NM_001046497:395_cdna Constitutive 0 NULL GeneID:541078 28 GENE MAT1A MGC128216 methionine adenosyltransferase I, alpha EMBV3_30134 AGTGTGGCCAAGGCAGGTTGCTGTGTCTTTAGGGGAATTGCTCTGGGGATGTTGGAAGAT Gene GeneID:515459|HEMK1:NM_001035308:181_cdna Constitutive 1 NULL GeneID:515459 22 GENE HEMK1 MGC127489 HemK methyltransferase family member 1 EMBV3_03059 GGAAACAGAAAGAAACAGCCCCCACTTTGAAGAGTCTAAAATGCCAGATTTATCCCTTGC Gene BVV0102_049153 + 0 NULL GK000020.2:1907282-2032971 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113075 TCONS_00113077 TCONS_00113074 TCONS_00113078 TCONS_00113076 1 XLOC_068941 Coding TCONS_00113075 XLOC_068941 Coding Coding - 20:2021395-2030682 - TSS84679 490 1 TCONS_00113075_1 79 4 0.94766314882619 0.000799834264612675 0.00638686721016665 0.00173875325616697 0.0017451894344735 0.00166132593289548 5.27022485365413e-09 9.77489372539806e-09 9.28496637778249e-09 2.30839793172107e-11 0 3.80087582493368e-09 6.53399020791229e-05 2.41241997786077e-17 0 2.55975134120637e-08 0.00426786468299596 0.00583950628806962 0.0174610970009455 0.00185711539276867 1.18186654313731e-08 0.000502804082608508 1.0743646684153e-08 0.00276187895448756 0.00388583515731032 0.00296312322494428 0.000167706761463511 5.05586828409344e-08 0.000281469760134854 6.49434531418706e-09 1.11685110376142e-08 XR_238897.1 LOC101904507 PREDICTED: Bos taurus uncharacterized LOC101904507 (LOC101904507), 0.0 884 100.00 0.997959183673469 NM_001102609.1 C5orf58 Homo sapiens chromosome 5 open reading frame 58 (C5orf58), mRNA. 2e-94 349 78.67 0.86530612244898 TCONS_00113075_1 sp|C9J3I9|CE058_HUMAN CE058_HUMAN Putative uncharacterized protein C5orf58; 2e-33 114 70.89 0.987341772151899 0 noncoding 1 1 1 0 -0.416350659519442 0.2271218601446 -0.297903501002668 0.00419396261004808 CCTCGGCCCAACTCTCGCTCTCCCCACTTAACAGGGAGAAATTGGTGCGTCCCCACAGTGGCTCTGAAGTGAGTGAAATACGATAAATTTCCTTGACTGAGGAAAAGGCAGGGTCAAAGAATTGATTCCAAGATGATTAAGAATAATGTTACTGACCATAAACTAAATGTGGAAGCCATAATTAAAAACATTAACACAATTTCTTTGGAGCTAAAGAAAATGAATGAACTCTCCCAGTTACTGCTTTGTGACCTGACCCTACATTTTAGTCATCCTGTGAAGACAGATGACTTAAAGGAAACAGAAAGAAACAGCCCCCACTTTGAAGAGTCTAAAATGCCAGATTTATCCCTTGCTTCTGATAGTTTTTAATCTGATTTTTTATTTATATGTTGTAAATTTGTGACTTTTTATTGTTGAATTAACTCATTTCTAGGAGAATTGAGTTTACTAATATATTCAATTAAAAAAATAAAAATGTGTTGAATTG TCONS_00114237 TCONS_00114238 r 3' 1929 TCONS_00114237 TCONS_00114238 r 3' 11215 EMBV3_17024 AGGAGCGGAAAATCAACTACTCCAAGCTGCTGACTGTGGAAGCCAGTGACACAAGCGACT Gene GeneID:614798|MFSD6L:NM_001102523:102_cdna Constitutive 0 NULL GeneID:614798 19 GENE MFSD6L MGC165717 major facilitator superfamily domain containing 6-like EMBV3_34905 AGGCTCAGGCCACAGAGAGCCCAGGCCAAGAACTCTGAAGGACAATAAAACACCCTTCTT Gene GeneID:100336252|LOC100336252:XM_002694040:109_cdna Constitutive 1 NULL GeneID:100336252 16 GENE LOC100336252 NULL hypothetical protein LOC100336252 EMBV3_27748 TGAGCCATCCTGCGGAGAAGACAAACCTTAACCCTCGAGTCAAAACTAGCCGACCCTGAT Gene BVT0102_016759 + 1 EMBV3_02757 GK000013.2:67120111-67257418 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043693 1 XLOC_025994 NonCoding TCONS_00043693 XLOC_025994 NonCoding NonCoding - 13:67170467-67171348 - TSS32260 695 1 TCONS_00043693_2 53 0.497841726618705 2 0.2125 5.87296367629109e-05 0 0.000156452499484359 0 0 2.57341782144816e-06 0 0 1.13527070630501e-05 0 5.2700536185934e-05 6.68834377078931e-05 4.12847043468118e-06 0.000653144198482411 0 0 0 0 1.0317890817529e-05 0 2.18397564320935e-06 2.13544421554979e-05 0.000118800592819725 0 3.4891605229422e-05 0 0.000126456491911478 2.76408114486252e-05 0.000169387576135295 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 4e-118 428 94.58 0.39568345323741 0 noncoding 0 0 0 0 -0.0233756866979301 0.81866997442245 0.0212962410248772 0.715169259260862 CTCCAGGAACAGAAGGGTGAAGAGGGAAAGGGTTCCCCCAAGAGCACCTGACGGAGAAGGCGATGGCACCCCACTCCAGTACTCTCGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCGAAGAGTCAGATACAACTGAGCGACTTCACTTTCACTTTTCACTTTTATGCATTGGAGAAGGAAATGGCACGCACTGCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGAACTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAGCAAGAGTACCTGAAGAAGCCAAAAAAAACCACAAAACAAACAGCTTTGGGACTTAAAAAAAATGAGCCATCCTGCGGAGAAGACAAACCTTAACCCTCGAGTCAAAACTAGCCGACCCTGATGAGCTCCTGCGTACACCCGGCCAGCCTCCTGGCTGGGTCCTCGCCCGGCCTCCAGCCCAGAGCCTGGCACCAAGGCGGTGCCTTCAGATGTTGTTTGACTAAATGGATGGAGATGGTGACAGCACTCCTCGAGCATTCGCGGTGTGCCAATTCTCCATAATTTTCTAGACATCTTGCTTTACCCTCACAACTGTCTTCTGTGGTAGTGTTTTGATTTCCATATAACAGATTTGCTCTTTTATTTATGT TCONS_00046095 r 5' 45255 TCONS_00046095 r 5' 45255 EMBV3_42433 ACACGCAGATGCTGCTTTATTTTGCTTGCCATCCAGACAGTACAGAAGGGGTCTACAGGG Gene GeneID:100337039|LOC100337039:XM_002696381:104_cdna Constitutive 0 NULL GeneID:100337039 20 GENE LOC100337039 NULL KPL2 protein-like EMBV3_29463 ACAGGAGGCTGCTATTCCTTCCCTTGCCCGGATTCCACCGGGTTTCAAGTCTCAGTTTTC Gene BVT0102_125624 - 0 NULL GK000020.2:31632213-31645124 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28057 CTGAGAAAACTCAGGATGTGAAACACAGGATACCAGCCCCAGAGAGCTGAGGTGCAAGTC Gene BVV0102_031630 + 0 NULL GK000021.2:20007368-20013596 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118749 1 XLOC_072712 Coding TCONS_00118749 XLOC_072712 Coding Coding LOC614749 21:19998188-20010340 = TSS89092 4089 1 TCONS_00118749_1 327 0.291513817559305 4 0.663813677886594 0.000196315839617369 0.000653677311861616 0.000251208238095635 0.000203629568618887 6.39937365064899e-05 0.000107185961654147 4.1359628872511e-05 0.000238670973835756 0.000117705507771961 0.00231282637136241 0.00104530001747759 0.00103231260287922 0.00124903827910039 0.00353978280192208 0.000574456491387293 0.0163845497024941 0.00434443371954895 0.00803843915627655 9.55685489907294e-05 7.9142768975741e-05 0 0.00790067650136654 0.00584344141275733 0.00844996858533286 0.000108442642703868 0.000541030817645914 7.88098338534188e-05 0.00151982255356317 0.00100855851361282 0.00373732846685296 XM_003583726.2 AEN PREDICTED: Bos taurus apoptosis enhancing nuclease (AEN), mRNA. 0.0 5808 100.00 0.787234042553192 NM_022767.3 AEN Homo sapiens apoptosis enhancing nuclease (AEN), mRNA. 0.0 1305 72.03 0.548055759354365 TCONS_00118749_1 sp|Q8WTP8|AEN_HUMAN AEN_HUMAN Apoptosis-enhancing nuclease; 0.0 511 80.62 0.990825688073395 1 coding 0 0 0 0 -0.279151885484032 0.0540415216488452 0.120696918476991 0.0402080953224761 TTGCCCGGGCGTGTAGCGGCTGCCGGCTCCCTGGACGCCACGTGCTGGCGTGAGGAGACTCGCGGGGCTTTCAGGCTGCTGCCCTGTTGGCAGATCACCTCCCAGGTCTCCCTGGCCCTGAGCGGTGCACAGATGGGGATGGTACCCCAGGAAGCTTCTGAGTCAGTGCAGTGCCCGAGCCCTTCCCTGGCCAGCCCGAATGCCAAGGATGTGCTTCGGAGGAAGCACAAGAGGAAGAGCCGACAGCACCAGCGCTTCATGGCCCGGAAGGCCTTGCTGCAGGAGCAGGGACTGCTGAGCCCACTCTGGGAGCCAGGACCCTCCCCTCTGCCTACGTTGCCCGGGGCCCCGCCAGGCACAGAAGCCACCAGCAGTGCCAGGCAGCGTCCGCGGGCTGAACCTGGAGGTGCTGGGTGCAGCAGAAAGCCAGCTCCCAGGGACTCTGCCGGCCCCTTGCCCAGCAAATGCGTGGCCATCGACTGCGAGATGGTGGGCACAGGACCCCGAGGGCGCGTGAGTGAGCTGGCCCGCTGCTCCGTGGTGAGCTACCACGGCGAGGTCCTCTACGACAAGTACATCCGGCCTGAGATGCCCATCGTGGACTACCGCACGCGCTGGAGCGGCATCACCCGGCAGCACATGCGCAAAGCCATCCCCTTCCAAGTGGCCCAGAAAGAGATCCTCAAGCTCTTGAAGGGCAAGGTGGTGGTGGGCCACGCCCTGCACAACGATTTCCAGGCCCTCAAGTACATCCACCCTCGGGGCCAGACCCGGGATACCACCTCCGTCCCCAGCCTCCTCAGCCAGCCAGGGCTCCACGTCCGGAATCGTGTCTCTCTTAAGGACCTGGCCCTGCAGCTGCTGCACAAGAAGATCCAGGTGGGCCAGCACGGGCACTCGTCAGTAGAAGACGCCGTGACAGCCATGGAGCTCTACCGGCTGGTGGAGGTGCAGTGGGAGCAGCAGGTGGCCAGCAGCCTCCGGGCGCCGCCTGAGGACAGAGAGCCCGACAGCAGCACAGACATGGAGCAGTACATGGAGGACCAGTACTGGCCGGCGGACCCGGCCCAGGGCACCAGCGGAGACCCGGGGGCAGCGCCGGGCAGAAGGGAGTGAGGGAGGAGAAGCTCCCCTGGGGAACGGGGACAGGAGAGCGCCTGGGGCAGGATGCCTGGCTGCCCCCAGGGTCTGAAGAGTTGGGACCACCTGCCCACAGCATAGCCCTCCCCTCTCTAGGGCTGTTGTCAGCCCTTCCTCCCCCAACTCCTGTGGTTTTGCAAATGGCACTTTATAGACGCCGTGAAAATGGCAGGTGGGCTAGAACCCAGCAGAAGTAGGGAATGCACCAACGGATGGCATCAAGCCACCCCCACCCTCATGCTGTGCTCTAAAGGGATCAGCCTCCTTGGGGGTGCTGGGTGGGGGTGTCAGTATTCCAGAGTTCCCTTATCTCCACCCAGTGACCTGGGGCAAAGTATTCTTCCCTGTTGTCACCAGCTACCTCTTCCTCCAGAGTCACTTTCTAGAGAATAAGTATGCCCTGAGGCTATACAGTTAAGGCCACTCCAAGGCCATTTTGTCCCTTTCTGAACTAGAACTCTGGCAGCAATGGAACAGCAGAGACCTCAGACCATGGGGAGCTGGGTCCTCACCTGCTTGCGGGGAGGAGTCACCAGGTGCTCTTCTGGGAGGAGGGAAGGCAGATAAGCTCTGGGTGGAGGCTGGCATATGTATCTTGACCCAAGGCAGGTATTCCTCCTGCCCACCCAGCGCTAGTCCCTCAAGCAGAAGTCTGAGAAACAGTAGAGCAGTTTAAATTCTGGGACCCCTCTGCAGAATTGCCCACTGGGATCTTTATTTATTGAGAGCAAGACCACAGGTCTCTAGGGGTGCAGAGGGCAGGTCTGCCAGGGTTAGACTGGGCATTAGCAGCTGTGTAGTTGTGCTCACACTTGGGTGGGTGCCCCCAGCCACTTGTGGTTGGGTGAGTGGGTGGGTTTTCTCTAAATTACTAAAAATGTTCTCTGTCAGGATTCATCCCCCACCCCTCTGTCCTTTTTCCCTAAAGGACCAGTTTTGTGGTATTGGGGTACCTGAGAGCTCAAGTCACACAGAAACTCTGAGCCCCATCTTAGCTCGCCACTTAATAGCTTTGAGACCTAGGTAAGTGTGTGACTTCACTCAAGTCTGATCCCTCATCTGTAAAATGGGGATAAGGGTACCACCTACCTCACAGGATTGTTAGGCTCTGTGAGCTGTGTTTTTTTTAAGGATTAGTGTTAGGTTCTTCCAAGTAACACCTGAACACACCCTGGGGCCATTTGAGGGCTTTGACCCCAGAAATGAAATATTTCCAGCCTTATCAGTAAACAAAGGAAGTCACAGTCATCAACAACTGCAGATTGCAGCCCTTAAACAGTGAACTGATGAACCCGGAAGAAACTCAGGGCTGAAAAGAATACCTGCCAGCTAGCAGTCATCAGACTAGCCACTCCCTACAGGAGAGCCCTGAGAAAACTCAGGATGTGAAACACAGGATACCAGCCCCAGAGAGCTGAGGTGCAAGTCAAAGGAATGATTTCAGCTTGAGCCCAGACTCTTGCATCTTCCCATACATAGAAAAGCACTAAACTCCTTAATTCGAGATTTCTGGTTTTAACTAGCATCGTATTTTGATGTTTGGGACCACTTGCCCTTTGTTTCAAAACTCCTATATAACCTGACTCCACTCCTCGCCTGCTCAGATCAGAGCTCTGAAATGCTGGCTCCTGGGCTGCAGTCCTCATTTTGCACCCAAATAAAACAACTCGCATCTCTCACGTTGTGCATTTTTTGCCCAGACAGGACTTGTTCTTGTGGCTATTCCAGTAGGTGGGGCACGGGCCACCAAGCACAGCTCAGAGGTTGTGGGCCCTCACGCTCCCTGTGCTGCACGGATTTGGTATCAGTCAGCAAAGCAGCAGGGCCAGAGAGTGAGAGACACTCCTGAAAACGAAACAGCAAACGCAGGGCCGCAGACTGTTCTGGGAGCTGGCTGAGTCACTGACCAGCTGCTGATCGGCTTCCAAGACTTTGTTCTAGGCTCCTGAAAAGCCTAGCTGATGCCACACTCACAGCTGAGCAGCTGCTTAAGGGCTTTGGGCTTTGGGCTGAGGGATGGAGCTGTTCACATGTGGAGGTGTACTGGGTTTAAAATCAGCTTTGTACAACCGTTCTGGAATAAAACCCAACTGCAAAAGTGGGTGAAATGGCCTTTTCTTTGAATCCTCCAGCCGAGGTGGGAAGGGACTTGCTGAAGGGCTGTGGGACCCCAGGGCACCGAGTCTTGCTGGGCGCTTTGGCCTTTGAGGTGGGTGGCTTTCAAGATGGTGCTTTGGAATGTGGCCAGAAAATCTTAGAGCTACAGAATGTATGTAGTTTATTTTTTTATGTAAGTGCCCTATCACGTATAGAGTACAAGTTTATTAAACTTGTTTCTCTTTGAAGCTATGTACTCACTTTTTATCTTTTTTTTTTTTTTTAGTTTTAAATATAAAATACACAGCTTAAAATTTACCATCTTAACCATTTTTAAGTGTAGAGTTAATAGTGTTAAACACCCACTATGCAACTCATCTCCAGAACTGTTATTATCTTACAAAACTGAGATTCTATGCTCATTAAACAATAACCCCTCAGACCCTCCTCCTTTCAGCTCCTGGCCACTCCCATTCCACTTTGATTTTGTGTGTTTGATTAGGTACCTCATATAAGTGAAATCTGACTCAATGGACGAGTTTGAACAAACTCCAGGAGATAGTGAAGCACAGGGAAACTTGGTGTGCTGCAGTCCGTGGGGTTGCAAAGAGTGGAACATGACTGAAAAATGATAAGTTAAATCCTACAGTATTTGCCTTTTCGTGTCTGGCTTACTTCACTTAACAAAATGTCCCCAGAGTTCATCTCTGAGGTTGTAGGATGTGTCACCATTTCCTTCCATTTTCAGGCTGAGTAACATTCATTTGGATGTCCATGCCATCGTTTATTCATCCATCCATCCACGGACCAGCATTTTTATTGTTAATAATGCTACTGTGTCTCTCCAGGACT EMBV3_37277 TGAAGGTGTGGTTCCAGAACCGGAGGACAAAGTACAAGCGGCAGAAGCTGGAGGAGGAAG Gene GeneID:539333|EMX1:XM_002691209:31_cdna Constitutive 0 NULL GeneID:539333 11 GENE EMX1 NULL empty spiracles homeobox 1 EMBV3_23427 GGCCATGTGAGACCTCAGGGCCTTTGGTGGGGAGTTTGGTGTTGATTCTAAATGTGACAA Gene BVV0102_057930 + 0 NULL GK000017.2:57668666-57701472 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21820 GCCCAGAAGCTCACCTGCCACTATGAAATCTGCAAGAACCACCGGGACGAGCTATACACA Gene GeneID:508215|TMEM8A:NM_001098907:93_cdna Constitutive 0 NULL GeneID:508215 25 GENE TMEM8A MGC152294 TMEM8 transmembrane protein 8A EMBV3_14642 ACAAAGCCAAGCGGCGCATCCTGGAGACACAGCAGAAGGTGCTGGAGTACATGACTGAGA Gene GeneID:534346|CEBPE:XM_002690506:484_cdna Constitutive 0 NULL GeneID:534346 10 GENE CEBPE NULL CCAAT/enhancer binding protein (C/EBP), epsilon EMBV3_38767 TGGCATTGTTGATACTATTTCCTGAATTAGAAGATCTTAATGATTGGAAACATTCATTAT Gene BVV0102_410255 + 1 EMBV3_20389 GK000011.2:66933746-66969148 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025217 TCONS_00025224 TCONS_00025219 TCONS_00025221 TCONS_00025211 TCONS_00025209 TCONS_00025222 TCONS_00025212 TCONS_00025218 TCONS_00025215 TCONS_00025223 TCONS_00025214 TCONS_00025213 TCONS_00025210 1 XLOC_014698 Coding TCONS_00025211 XLOC_014698 Coding Coding APLF 11:66840498-66935976 j TSS18355 5156 1 TCONS_00025211_4 509 0.204422032583398 10 0.946102202624716 0.000773627272945204 0.00024028115671405 0.000512110710219684 0.000248048219054239 0.000219470292235402 0.000140092151244233 0.000167445055702623 0.000217053625373396 0.000341378054334543 5.7776662446842e-06 1.36881381504584e-33 3.4356247872345e-43 1.48624170550221e-05 6.52578909258848e-64 2.97658904976123e-05 0.000279325019034125 0.000163230007167634 1.11750314742409e-17 0.000421269415204798 0.000232278590883858 9.98588002614988e-05 3.10377507876576e-26 4.62283167104341e-05 4.89259347985374e-18 0.000421616231125779 0.000489641694344549 0.000570873063210718 1.47959733862818e-12 8.23100618232241e-13 2.20561108069706e-49 NM_001077874.1 APLF Bos taurus aprataxin and PNKP like factor (APLF), mRNA. 0.0 4599 100.00 0.494375484871994 NM_173545.2 APLF Homo sapiens aprataxin and PNKP like factor (APLF), mRNA. 0.0 2818 76.96 0.715865011636928 TCONS_00025211_4 sp|A0JNH9|APLF_BOVIN APLF_BOVIN Aprataxin and PNK-like factor; 0.0 915 95.28 0.99803536345776 1 coding 0 0 0 0 -0.259958735079621 0.164227757824707 0.000972024802389664 0.983472121179968 CGTCACTGGCCGGAGTGGAAGGGCGGGGTTCGGTCCCCCTTGGTGGGGCCCCATCTCCGCGCAGCCGGGGCATACTCGAGGGCAGTCTTTGCTCTACCTCCCCCTGTGTTTCTTGGGGCCTCTCTGGGCCCAGCGCCTGTCGTTGGAAGGTGGAAACGGTTGCAGGGTCTCGCTTCTTGCGAAGGGGTCTGTTTAATCCTCGCCGCCATGTCCGGGGGCTTCGAGCTGCAGCCGCAGGACGGCGGCCCCCGGGTGGCCTTGGCGCCCGGGGAGACGGTCATCGGCCGCGGGCCGCTTCTGGGAATAACAGATAAGAGAGTGTCCAGAAGACATGCCATTCTTGAAGTGGTGGGTGGTAAGCTTCGAATCAAACCGCTACACAGAAATCCATGTTATTATCAGTCTTCTGAGAAGAGCCAGCTCTTACCATTGAAGACAAATATATGGTGCTGGTTGAATCCTGGAGATCACTTTTCTTTATTAGTTGACAAATACATTTTCTGTGTCTTGTCTACACATTCTGAAATGGAAATGGAGTGTACTTTAAGAAATAGTCAAATGCTTGATGAAGATGATATATTGAATGAAATACCAAAATCTTCCTCAGCTGATTTGCCTGATAAAACACCCAGTGCCCCACGGCGGGAAAGAAGTACAGAAACAGCAAAGCCCCAGGCCGCTGCAAATAACATGTCTTTCATAGGTGAAAGTAGAGACTTGAGTAAGCAACAGCCAAATCCTTCCGAGAGGAAAAGAATCCTCCCAGCATGGATGTTAACAGAAAATTCAAGTGATCAGAACCTTTCAGTCATCAGTGGAGGTAATAATGTAACCTGGGAAAGTGAAAAAGAAAGAGTCTGCAAAGATAAAACCCAAGTAAACATAACACAGCCAGGAAAAAAGCGATTAATTTCATCAGGAAGTTCAGAAAGTACATCAGCAAAGCAAGACACAGGAAAAAAGTGCAAAAATGATGATCAGGAAGAGTCTATCATTTCATCCAAGGAAATGCCACAGTCATTTTCTGCAGCCATGTTACATAACACAGAGATAGATAACACTAAGACTAATCCACAGAGAAGCAAAGTCCCAGTAGAGGCACTTGGTAAGGTTTCTGAACATAAAATCATCACTAAGGGAAGTTCAAATGAAGACAGCACGGCGAGAAGTTGTTCTGAGAGTTATTCCAGTACCCAGAGCAAGTCTTTCTGTGACAAGCCTCAAAAATCTCATCCTGAGCCCAGCTCTAATCCGCCCAGTCCTGAATGTGTGCAGGCGAAGGCAACCGATTCAGTTCCAAATGGTTCTGAAGAAAACAAGGTACAGAGAACATCCTGCATGTATGGGGCAAACTGCTACAGGAAAAATCCTGTCCATTTTCAACACTTCAGTCACCCTGGTGATAGTGATTATGGAGGTGTAAACATCACGTGTCAAGATGAAGCTGATGACCGACCTGAATGTCCCTATGGAGCATCTTGTTATAGGAAGAATCCCCAGCACAAGATAGAATATAGACATAGTACATTTCCAGTGAGAAGCATTTCAGATGAAGATGACAATGTTGGGCAACCCAATGAATACAACCTGAATGACAGCTTTATAGATGATGAGGAAGAAGAATACGAGCCAACAGACGAAGATTCCGACTGGGAACCAGAAAAGGAAGACCTAGAGAAGGAAGATATGGAAGGGCTTTTGAAAGAAGCAAAAAAATTTATGAAAAGAAAAAAGTGACTCCTCTGCAGTAATATATGGCTCATATTTACTGTTTCTTTATGGAAAAATAATTCAGGAAGCACTTAAGGGATAATTGTTTTTCTGCTTTTTATGGTTATGACTTTACTATTGACTCTTCACAAATGAAACATTGAAATGTCACCCTTCAGTGTAGTGGATGAAATTTGTTGCTTTGCTTTTTCTATGTTATTTCAAACATCTGGAAATAATAAGCAGACAGAGTTAAAAAGAAATAATTGATATTTTTCATGTACTTTATAATAAAAAGTAAACATCATAGGTTGCAAAAAAAAAAGGTCTTTTTTTCTTTTTTCCAAAGATTCTGTCTTTAGATAAAATACTATGCAAATATAACCAGGCAGATTACGTAACTGGTGGGAAAGCATGCTTCTTTTCATTCCTATTGAAGTAATTCTTAAAGCAGAACCAGACTTTAAAAAATACCAGCTATCATATAATGGCTATTATTTTTTCTAATGTCCTAGATGTGAGCTTTGCAATTTCATTGACTACTTTCGTTCTTTGAAACTTGGGGAAATTAGTACAAAATGGATACTGAAAATAGATTCAACTAGACTACAGAAATGTCCACCATGCAGGGAATGCTATTTTATGTCCCAAGTCTAATTTACTATATGTTTGAGTTTAAAAGTAGAAAACCTGAAAGAATTTGACCATTTCTTTTTCAAACAAGTCCTGCCTGATGCTTTTAACTCTCATTATGCTATTCTTAAGAATATAGGGATTATTTTTAACCATAATTTTCTCAAATTATATTAGTTCTTTTATCCTCAGATGACAGTAGCAAGTTGTCTGCCAGCATTCAAGATTCTGGCCTTTTATTTCAAGAAGAAACCCCTTCTCCAGTTTTATGTAGTATAATATTTCTGCATCTCTGTTCTTAAATTCCTTTAGGCTATGTAATACTCTTCATTTTACATGACTTAGAATCTTTGAAATATAGTTTACAATCTTTAATATGGGTTTGTACAAACAGCAGTAAATATAGCTTTGAAATTGTAAATCATAAACTAAAAGTTCCTCATTAAGCACTAATATTTTATATTCTACGAGGACCTAAAAATGTATATCTTAAAAGAGCAGGACAGATTTGTAATTGTTTTCTTAGTGTTTTTAAGTTTGTTTTCAAATAATTGCATAATATTAAAATTTACTTATATTACAGCAAGGAAAAGATAAATATTTTTCTATTATCTTTTATTCTAATTTTTCTCTCTGTTGTTATTTAGAAGCTAATTTTCTCTTCTAATGTCCCTTTAGTCTTCCGGGCTTGACAAACCTGTGAAAAAAATTCTTTGAACTTACTTTTACTTTCACTTTGCACAAACTTAATCCTTAAAGTGTTTCTTAATCCATTCATAGATATATCCCAAAGGAATTAAAAACATGTGTCCACATGAAAACTTGTACACAGTGTCGGTAGAAACATCATTTGTAACAGTCAAAAAGTGGAAACATCTAAATGTCTTATCAGCTGATAATGTCGATAAGCAAAATGTGGTCTATCTTTACAACCAAGTATTTTTTGGCCAAAAAAAGAAGTGAAGGATTGAAACGTGGTACAGCATGGATAAACCTTGGAAACATTATGGTAAGTGAAAGAAGTCAGACGCAAAGGCCACAAATGGTATAAGCTCAATTATATAAAATATCCAGAACAGGCAAAGCCGTAGAGACAGAAAGTGCATTGGTAGTTGCCGGGGTCTAGAGAGAAGAAGAGTATCTTTCTGAATTGATAAAAATGTTCTAAAATTAGTGGTGATGATGTAAAACTCTGTAAATATACTAAAATCCATTGAATTGTATACTTTCTATGGGGGAATTTTATGGCATATGAATTATATATGTGTCAAGAAGGCTATGATAAAGAATATAAAAGGTGACATTGGCCTTTTAGAAAGAAAGAAAGGCGTTCAGTATCAGAATATATTCTTCTTAGAAGTTATGTGATAGCTCATGTTAATTTTTAAGAATAGTTTGATGTGCTTTGCATAAACATCCTGAAGACACTTTTGAGTATAACGAATGTATAAATATTTAACTTCATTGTAATGAAAATTTCCTACTTGGACTATATTTAAGTGTATGATTTTCAAAATAGAGGCAAAAGTGATGAAATTGGTGGGCTCAAAAGCATTGCTAACAAAACTTGATTTAGTTGCTGTCCTAAACAGTGGATTGAGAAACGACTATCCCTATCATGGTATTCATAGAATTTAAACTATATCCTAACCTCCTCCTTCAAGCTAAGAATGGTCACATACATTTTTCTCACTAATGTGCTTAATTCGAAAAGCAAATGTTTTTTGTCGACTTCTTGAAGTGAGGTGGGTTTTCTGGGACCTTGGGAAGCTGGAGTCATGAAGATTTTCAGTGACACATGGGTATTGATTCTGCTTTTCACCCAGGTTTGAGGATGGCATTGTTGATACTATTTCCAGAATTAGAAGATCTTAATGATTGGAAACATTCATTATAGTGAAAAGAAATAGATTATGAGCATACTTTTTCCAGAATGGTGATGTAAAGTTAAATGGATAGTGACTTTCCTCTGATTTATCTGTGCAAAGTTCAGTGTCACCAACACATCCCATGGAGGCAGAAACCACACACCAGCGCCTACATCTAGCCCTGCTCTTTGAGTTCACCTTTTTGTGCCCATTACTTTCTCTTTCTTGAGGAGGAATCTGTAAGAGAGGCTCTCTGTGTGTGTGCGTTCTTCCTGCCGGTCTGCAAACCTACAAAGCTGCTCCTCCACAGTAGGTATTGAAAGAAAAATGATAATAATTATTGCCAAGATCGTTACTGGCCATCCTGATATAATGTACACAATAAATTTGATTATCATAAGCAACCCCAGTTGTACTCTGTTGTGCCCAAGACCCCGTCTTAGGTGCTGGTGATTCAAAGAAGAATAACATGGAGTTTCTGTTTTCAGTGTCCTTACAGTCTACTGGGGAAGATAGGAATATTTATTCATTCAACAGTGACTACAGAATACTATGGAGAATACAAGGAAGAAAAGGACATAGCTTCTACAATCAGAGAGCTTGCAAAGGCAGTGAGGCAAATATGCAAATAACAAAATGGGTAGAAATGCAATAGTCCGAGAAAGGAATGCTGGAGTATAATTTAAATGGCCTGTCTTGCTGCGTATTGAAATACAGCCTCATTCTTGAGGAAGAGCCTTTGTCTGATTGAGTTGCAAGCTGAACTTGTAGATTTTTTCATGGAACACAACCTTTATCTTCAAAAATGACTGGCAGACATACTACAGTTATTCAGAATGGAGTGTGTGGCTGGCATTTCCTCAAAAATGAACTTAGCCTATTTTTTTTCCCAAGGAAAACAACAAACAGTATATATTATAATTGTAAAAATGAGCTTTCAAACAA EMBV3_39830 GGGCAAGCATGCAACAGCTACTTGTATGTTTAGTGTCAGAAGAAGTTCTGTGTGGGACTG Gene BVV0102_291057 - 1 EMBV3_13906 GK000002.2:105087270-105138333 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24748 CCCCTCAAACAACTCAATACATCCAGTTCAGGAAACACACGGTGGCCAAGTCCAGACGGA Gene GeneID:100336481|LOC100336481:XM_002699364:275_cdna Constitutive 0 NULL GeneID:100336481 29 GENE LOC100336481 NULL cardiotrophin-like cytokine factor 1-like EMBV3_37542 TCAGTTCCATACGCTCCAGGCTTAACGACCAGGACAGATCTTCGATGTTACACAATCCCC Gene BVT0102_254340 + 1 EMBV3_22437 GK000005.2:19280029-19351074 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05870 GGCAGATTCTCAACCACTGGACCACCAAGAAGTCCCCTCAGAATTGAAAAAGAAAAACCT Gene GeneID:537878|PEX26:NM_001101172:88_cdna Constitutive 2 NULL GeneID:537878 5 GENE PEX26 NULL peroxisomal biogenesis factor 26 EMBV3_40449 GAGGCGATGAAGTGACTGGAGTTAGGGACGGCTGTGAACTAAACCAGGAGCGGCCGACTT Variant GeneID:100316905|LOC100316905:XM_002689764:24_cdna 94^173 9 EMBV3_40806 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_30966 AACAGTTCTCGAAGAAAGCCCCCCAGGCCTATAAAATGGAGTGGAAGAACGAGGTGGACA Gene GeneID:526134|SLC9A2:XM_002691185:92_cdna Constitutive 0 NULL GeneID:526134 11 GENE SLC9A2 NULL solute carrier family 9 (sodium/hydrogen exchanger), member 2 EMBV3_24477 GAGGGAGCGGGATCACCGGCCCGGAGAGAGCTCTCAGGGCCTGAGTGGTGCAGGAGGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41142 ACGGACCTCCAACAAATAGTTCCTTCCTTCTTATTAACGGTATTCGAGTTTTGTGCATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24363 GGGTGAAGGAAAAGGCCAACATGCTGAAGAGCGAGATAAGAGAAGTCGAAGAGCTTGACG Gene GeneID:511533|SPATS1:XM_002697259:478_cdna Constitutive 2 NULL GeneID:511533 23 GENE SPATS1 NULL spermatogenesis associated, serine-rich 1 EMBV3_21911 GAGTTCATACAAATTTGGTAACCGATCATTCTGGATAGGATATGAAAGGATATAATTTCT Gene GeneID:540885|IBTK:XM_002690046:7_cdna Constitutive 2 NULL GeneID:540885 9 GENE IBTK NULL inhibitor of Bruton agammaglobulinemia tyrosine kinase EMBV3_37663 GGATGTTAGCCAGAATTCCCTGATGTATGATGAAAGTGAAGGAAATTGCCCTTGGGCCAG Gene GeneID:574090|TLR1:NM_001046504:38_cdna Constitutive 0 NULL GeneID:574090 6 GENE TLR1 NULL toll-like receptor 1 EMBV3_26309 TGGGCCTGCTGGTCTTCGCCCACGACCATGGTCTTCGCTGCGAAAGTTCTGAACCTCGTC Variant GeneID:505290|MGLL:XM_002697155:100_cdna 337^584 1 EMBV3_00603 GeneID:505290 22 GENE MGLL NULL monoglyceride lipase EMBV3_24574 GAGCTGTTCAGAAGGCTGGTTATCTACAGGTGACGAAACAACTGGAAATGTGCGTTACTC Gene GeneID:520216|LOC520216:XM_002685846:376_cdna Constitutive 0 NULL GeneID:520216 3 GENE LOC520216 NULL similar to Ki antigen EMBV3_41265 CTCATCGTCCTCATGTCCCCTCGCTGAAGACCACTACCAGCAAGAACTGGAGCATCTGAA Gene GeneID:520778|LOC520778:XM_002693268:26_cdna Constitutive 0 NULL GeneID:520778 15 GENE LOC520778 NULL similar to ubiquilin 2 EMBV3_26822 GACTTTTGGAGCTGCACTGAAACATCTGTAATAGTTAAACCAACCTGGTTTTCTTTTCTT Gene GeneID:509771|RBM3:NM_001034363:51_cdna Constitutive 2 NULL GeneID:509771 X GENE RBM3 MGC128854 RNA binding motif (RNP1, RRM) protein 3 EMBV3_00517 GTATGCTACCTCTTCTATTAAAAGATGAACTCCTAATGCCTTCAGTTGTGACAGTGATGG Gene GeneID:510138|ALG6:NM_001075432:54_cdna UTR3_Alt 2 NULL GeneID:510138 3 GENE ALG6 NULL asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) EMBV3_14896 AATTTATGAATGGTGTTTATCCCTCCGCATCCTGCTTCTGCTCCCCAATACCTGCTGCCC Gene GeneID:506932|CHST1:NM_001083648:45_cdna Constitutive 0 NULL GeneID:506932 15 GENE CHST1 MGC139349 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 EMBV3_35017 GATCTGAAAAGCCTATGCAACTCCTGATAGTCTGACACCTGCTTCACCAGGATTAGTGGC Gene BVV0101_015167 + 0 NULL GK000009.2:62225108-62635555 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235701 TCONS_00235698 TCONS_00235692 TCONS_00235697 TCONS_00235699 TCONS_00235702 TCONS_00235695 TCONS_00235703 TCONS_00235705 TCONS_00235706 TCONS_00235696 TCONS_00235693 TCONS_00235700 TCONS_00235691 TCONS_00235690 TCONS_00235704 TCONS_00235707 1 XLOC_144282 Coding TCONS_00235703 XLOC_144282 Coding Coding RNGTT 9:62034252-62227459 j TSS176596 3600 1 TCONS_00235703_3 320 0.0775 11 0.981423972340403 5.62803452155025e-05 3.89055357255603e-09 5.04508095166872e-05 1.10942249930358e-10 4.76167391690773e-12 4.11420251991899e-05 2.59988113192113e-18 0.000111018907339949 0.000333534488785333 4.50258018837175e-22 4.64182923947075e-08 0.000413832301649256 1.58845883857734e-12 9.0935754159257e-16 1.18516843063575e-20 0.0133309793108966 0.00363191293950212 0.00217328297452964 9.95595367191941e-08 0.000240730210002812 2.00435265108754e-19 0.00544564101424052 0.0044912929701995 0.00511987556808078 2.77047986697511e-05 6.35839723023704e-15 3.20490918673987e-12 0.00050520059748366 0.000309252457183161 0.000809025625979658 XM_005210890.1 RNGTT PREDICTED: Bos taurus RNA guanylyltransferase and 5'-phosphatase (RNGTT), transcript variant X1, mRNA. 0.0 5988 100.00 0.921944444444444 NM_003800.3 RNGTT Homo sapiens RNA guanylyltransferase and 5'-phosphatase (RNGTT), 0.0 3984 85.23 0.980555555555556 TCONS_00235703_3 sp|O55236|MCE1_MOUSE MCE1_MOUSE mRNA-capping enzyme; 0.0 629 95.58 0.9875 3 coding 0 0 1 1 0.000472461656076728 0.998863421592047 -0.00681748119685665 0.881160230224535 GGTGGGTTTGATAGCAGCCTGAAGTTAGCAGCCTGAAGGAGATTATCAAACTGGAAGATCCAGGGTGCTATTTTTTTGGAGGGTGTAACTGTTAAAGGTGTAACTCAAGTGACAACTCAGCCAAAGTTAGGAGAGGTACAGCAGAAGTGTCATCAATTCTGTGGCTGGGAAGGGTCTGGATTCCCTGGAGCACAGCCTGTTTCCATGGACAAGCAAAACATTAAACTTTTGGAGCAGAAGCCATATAAAGTAAGCTGGAAAGCAGATGGTACTCGGTATATGATGTTGATTGATGGCACAAATGAAGTTTTTATGATTGATAGAGATAATTCAGTGTTTCATGTTTCAAATCTGGAATTTCCATTTCGTAAAGATCTCCGTATGCATTTATCAAATACTCTGTTAGATGGGGAAATGATTATTGACAGAGTTAATGGACAGGCCGTTCCTAGATACTTGATATATGACATAATTAAATTCAATGCACAGCCGGTTGGAGATTGTGATTTTAATATTCGTCTTCAGTGTATAGAAAGAGAAATAATAAATCCTCGACATGAAAAAATGAAGACAGGGCTCATTGACAAAACACAGGAACCATTCAGTGTCAGACATAAGCCATTTTTTGACATCTATGCTTCAAGAAAGCTACTTGAAGGAAATTTTGCCAAAGAAGTCAGCCATGAAATGGATGGACTTATTTTCCAGCCCACTGGAAAATACAAACCTGGTCGATGTGATGATATTTTGAAATGGAAGCCTCCCAGTCTTAATTCTGTGGATTTTCGCCTAAAAATAACAAGAATGGGAGGAGAAGGGTTGCTTCCTCAGAACATTGGCCTTCTCTATGTTGGAGGTTATGAAAGACCCTTTGCACAAATCAAGGTGACAAAAGAGCTAAAACAGTATGACAACAAAATTATAGAATGCAAATTCGAGAACAACAGCTGGGTCTTTATGAGACAGAGAACAGATAAAAGTTTTCCTAATGCCTACAACACTGCCATGGCTGTGTGCAACAGTATCTCCAACCCTGTCACCAAGGAGATGCTCTTCGAGTTCATTGACAGATGTGCAGCAGCTTCTCAAGGACAGAAGCGAAAGCATCATCCAGACCCAGACACAGAGCTCATGCCTCCACCACCTCCCAAAAGACCTTTGACCTAAAGACCTGCCTCTGACTTCAGGACTGAGAGGAAAGATGAGTGAGAAAAAATGCTGTTGTCCCATTTTTTGCAACCAGAGAAATTAAAAAAAAAAAAGAGTGTGGCTTGATGTTGATATACATTTGACTTAAAAAAAAAAAGTATTGTAGCCAGTCTGTAAATATTTGGTGTTTTTGTTTCCTCAGTGCTACAATACATCATGGACTTAAACATTTTATTTATATATGATAAATTCAGCCTTACCTTGTGGAATCTGAAGATTGAAATATCTCAAGGTTTAAATGAGATCAAAATCAATGAAAAAGAGGCCTTGTTTATATATGGATAACTTTTGCTTTAATTTATAAAGTTAGCAATCTGGAACTGTGAGTGCATAGAACATTGTCTTTTTTAGAAGTTATATTTCAACTATGATAGATTTTCCTTTTAAAACATTTAGGCAGTGGCATTAAACATTCTTGCTATTATTTATCATGGATTTCCTACATCTCTGAAATTCTGATATTCAAAACCAAATGACAAAGTTGTTAAATATTGTACTGTATTAAACAACTTGGTCTGGTTTATATCATTTTAAGTTGTTTTGGAACTGTAAAAGTAAAAAAGTGAAGCTCCATCTTGTGAATGTCATTCTTTCTAAAGGAAGTGTATCTAGTCTGTGGTTTGAACTACAGTATCAGACATACCCAGTCTGTCCACTCTGGCAGTGGTCTTGAGTCACTTCATAAAACGTGGAGATACACCGCCCAGTCCCTGTGTGGTGTTCTTCTGGGAGGCTTTTTTAATGCCAGGGCTACTTCTCCCCTACCTTGGTGGTATCGGCGCATTGTAAATTACATTAAAACACACAACTCACTGTGATGATGGGAGTGATATCAGGTATATACACAATGTTGTATTAGTTCCTTTACACAAAACTGCAAAGGAAATGCCAGCTGACTCCTTTGATTAGAAGGTAACATCAGTGGAAGAGAATGCTGTCCCTGGAAAATGCTCTCCCACTGCTAGATAAATGCAGAGGCAAAGACTAGACATCTGTAGGAACTAAACATGAAGGAAGCCAAGACATTTATTTTCAAAGCCAGAATTTTCTCTCATCTTCTATTCTGGGAATGCTATTTCGGTTGTACATCTGAATTTTAACACATTTACTGATAGATAATGGATTTAAAGAGTGGCTAATTTGTCACGTGCCATTGTTGAGAAACTGTGTTCTGATTGGTTTGTCAAGGAACTCTTGAGAATTAGCTTACTGGAGGCCAATGTATTTATTTTTAGGGTACAGGTTTTAAGTATGTGTATTTAAAACAAATTTTCATTATCTGAATTTTATATATGTAAATGCATATATATGTGAGTATAGGCAGCAGTGTACATTCTTCTACTAAGACAGGGAGACATGAAAATCCAAACGAGTCACCTAGTAGATTGAGTATCTGATAGGATTTCTATATGAAACAGCACAGATTAACCAAAAGTGTATTTCTATTCATTTGAGTTTTAATGTTTTTAAACAAAGTTTTCTCCTGCAGTGCTTTTCTATATGAAATACTGGAGTCATGCTTGGGCTTCTCCCTTTATTGTTCCCAAGTTATGTAATGTGAATTTATTCAAAATGCCATTGTAGTGTTTGTTTCCTAGAGTACTTTTGTGTGTTTGAGTGCTACAGGGATAAAAACATCTGATTGCTGCTGCAACTGTTGAAAGGTGGAAATTGGTCAAGATTTCATGGTGTCTTGTACAAAATGGATCTGAAAAGCCTATGCAACTCCTGATAGTCTGACACCTGCTTCACCAGGATTAGTGGCTCTTTTCACACAGTGTGATGCTTTCTTCCAAGCTCGTGTAAAGGCAGAAGCCTTTTGCTGATGAGAGAGCAAGCCTTTGTCAGCGGTCTTTAATGGAGTTAAAATGTTTATGGTAATTGTAACCTTTTAAATGAGTTACGTGAAAAGAGCATCTCATCTTCAGTACACTCAGATATTTTCTCTTTGCCTTTGTGCATTTTCCAGGACTTAATTTTCTTAATTTATCTCTCCCTTTCAGTTGTAGTGATGTATAGTAAGTAGATCCCATTTACCCCTGAACACATTACCATCCTTAGTGTCATAAAAAGTCATCCAGAAAATAATCGGGGTGGAAGTCTGGAGGCACAGTTTGGGACGTCATGAAGGAAATACTTCTGTCTCAGCCCACTTCCTAATAACTGTTTTCTGACGCTGAAGTTATGTAGACAAGAATAAGAAAACTTTACTTTCCTTTGTTATCACAGATAAAAGATTTTGCTCTGTGTTTGCAAAAGATGTGGAAGACTTGACTGCCTGGCTGGTTACATTTGCTTTCCGTGAAATGCTCAGAAAATGTCAGGACATTCCTTCTCTAATTGTGTGTCAGTCCATATTGTAATAAAACTACTGATTTAAAATAACAGAAA EMBV3_22498 GCTGATAGTATCTGTTAGGCTGTTCTCCTTGAGGCTGGCTTTCCCTGGAGCATTAATTAG Gene BVT0102_176581 + 0 NULL GK000011.2:72060707-72067120 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028332 TCONS_00028331 TCONS_00028334 TCONS_00028335 TCONS_00028336 TCONS_00028339 TCONS_00028337 TCONS_00028338 TCONS_00028333 1 XLOC_015451 Coding TCONS_00028336 XLOC_015451 Coding Coding ZNF512 11:72065706-72097247 j TSS19905 3758 1 TCONS_00028336_2 479 0.0896753592336349 11 0.881198478123018 0.00123798083342894 0.000709213708842035 5.50801661996869e-08 1.46631297160335e-06 0.000801046282323761 8.86246588349519e-14 0.000787292878778675 4.61211492162513e-15 0.000325550456994805 4.39654504357935e-07 3.15366119009263e-18 3.32736482876552e-10 1.96266459233019e-05 1.77774525290239e-12 0.000117608729477071 0.000932716803040408 2.03411985463161e-05 0.00213420616847546 0.000988390442915415 0.00177890251903537 1.39345641072054e-12 0.00175391521402634 1.51603720542626e-13 1.68495436292094e-13 0.000930926681488003 0.000606031188840752 0.000234570515090831 3.30736662293653e-30 1.76986142021978e-14 0.000109177678090678 XM_005213003.1 ZNF512 PREDICTED: Bos taurus zinc finger protein 512 (ZNF512), transcript 0.0 3544 100.00 0.522618414050027 NM_032434.3 ZNF512 Homo sapiens zinc finger protein 512 (ZNF512), transcript variant 0.0 1831 93.01 0.327035657264502 TCONS_00028336_2 sp|A4FV61|ZN512_BOVIN ZN512_BOVIN Zinc finger protein 512; 0.0 768 96.47 0.826722338204593 1 coding 1 0 1 1 -1.03675719278521 0.0194074166141437 0.0392110339296942 0.427301813844388 TAGACGTTCGCCACCGGGCTCGCGGACCCGACTCCACATCCGGGAGCGGAGAGGAGAGCGGAAGTGGCGTTGGTCTGGCCGGAGCCCTTGGGTGAATTTGTTAGGCGTGGAGAGGGAGTGATGTCTTCCAGACTCGGTGCAGTGCCCGCTACCCCGGGACCCACACCCTTTAAGCAGCAGAGGAGCACGAGGATCGTGGGAGCTAAGAATAGCAGGACCCAATGCTCCATAAAGGATAATAGTTTCCAGTACACTATCCCTCACGATGACTCCTTAAGCGGCTCATCATCTGCTTCTTCATGTGAACCAGTGAGTGATTTTCCAGCATCTTTCCGAAAATCTACCTACTGGATGAAGATGAGAAGGATCAAGTCAGCTGCTGCTTCCCATGTAGAAGGGCCAGGTGGAGTGTCAACCAAAGGAAAAAGGAAACCCAGGCAGGAAGAAGATGAAGACTATCGAGAATTTCCTCAGAAGAAGCATAAGCTTTATGGGAGGAAGCAGCGGCCTAAAGCTCAGCCTAATCCCAAAGCCCAGACTCGCCGTATTCGGAAGGAACCACCAGCTTATGCAGCAGGCAGCTTAGAGGAGCAGTGGTACTTAGAAATTGTGGATAAAGGCAGTGTCTCCTGTCCTACCTGCCAGGCAGTGGGGAGAAAGACCATAGAGGGCTTAAAGAAACACATGGAAAACTGCAAACAGGAAATGTTTACTTGTCATCATTGTGGGAAACAGCTTCGTTCACTAGCAGGGATGAAGTATCACGTCATGGCAAATCATAATAGCTTGCCCATTTTAAAGGCTGGAGATGAAATAGATGAGCCAAGTGAGAGGGAACGTCTCCGAACAGTTCTCAAGAGACTGGGAAAGCTGAGATGCATGCGTGAGAGTTGCTCTAGTAGCTTCACCAGCATCATGGGATATCTGTACCATGTGAGAAAATGTGGCAAAGGGGCTGCTGAGCTGGAGAAAATGACCCTGAAATGTCACCACTGTGGAAAACCGTATAGATCGAAGGCTGGACTTGCGTATCACCTGAGGTCAGAGCATGGTCCTATATCCTTCTTTCCAGAGTCAGGACAGCCAGAGTGCTTGAAAGACATGAGCTTGGAGTCAAAGAGTGGAGGCCGAGTTCAAAGGCGTTCTGCCAAGATAGCTGTATACCACCTGCAGGAACTGGCCTCTGCTGAACTGGCCAAGGAATGGCCTAAGAGAAAGGTGCTTCAGGATCTGGTACCTGATGATCGGAAGGATTGGTTTGTTGTCAATCCGACAACAACCAAGAGCTTTGAGAAGCTGATGAAGATAAAACAGCGACAGCAAGAAGAAGAGAAGCGGAGGCAGCAGCACAGGAGCCGACGGTCTCTAAGGCGGCGGCAGCAGCCTGGCATTGAGCTTCCTGAGACAGAGCCAAGTCTTAGAGTAGGGAAGGATCAGAGGAGGAATCATGAGGAACTGCTAGTGGCGACATCCCGTAAAGAACCAGAGCAGGAGCCAGTGCCAACACAGTTTCAGAAAGTCAGGTCCCCAAAGACGAATCATAAACGAGGAAAGAAATAGGCAGTCAGTGTGAAAGCACTCCTGGGAGAGTGGATGGGAGGCTGTGGTTACAGGGACCTGTGTGGAGAGGCCTGAGTCACGGGGGCTGAGTGAAGAGAAATTTACTCTTTCAGCTGTTTGTGTAACGCTGTGACACACTCAGCTCCTTCCTCCTGTGTAAATTTCACTGTTTTCCCTACTGATTCTTGTGAACCCTCCACCACCCCCACCCCCATCCCCTTTTTGGTAGATTTTCCTGCTATTCTCATTGGAGTCCCCCTGTTTTTCTCTCATCTTGCCCAAAGAGCTCCCCCTTAAGGTCCACTGTAGGCCCTCTTGCCCTGTACAAGACTAAGAAACCTGTTTGATTATCCTTCCCATACTGGGGTATAGAATGTTCTTGGAAACGCCATTGATTTCGTAGTTACTCCATCATCTATCTTATAAAATGATTCCAAACTAACTTTTTAAAACCATATGATTGATGATTTTGTATTTGTGATATAACAAGCCTAGAACCTAGAACTGTTGTCACTCCTTTAATAAGGGTCCCCTGTCTGCTTGGGTGACAGAATTTCTGGAGGCTGTTTGTTGTCTCATTATGGTTTTAGGATTGAAAGTGAGAAGATACTTAGAATAATAAAGCTAGACCCTCTGGACGCAGGTTTTCCTGGGAAATACTTCATCCCAGGTGGCAGTAAGTAACTAGATGCACAGGTATGATACGCAGCCTTAGGAGGAATATGTCTCACATAAAATGACTGGAAAGAAGAAAGCAGCAGAAATAAATACCACCTCAAATGAACTTCCCTGCAGTTTATTTTGTTCCTGCAGTTTTGAGGATTGAGAAGTAATACCCTTTTACCTCTGATATTTGACACAGAACCCTAATATTGCTGGTACTGCCATGAAGATTGGTAGCCAGGGTGCACATTCCTTCTTCCCTGGACTTGACCTGATGGTTAGTCTGCACTCTGTTAAGTCCTTGTATCTCCCATTTAGCCAAAGTCTGTCTCTGAATTTTCTGAGAATGTTGTTCTCTACCCTTTTTTAGATCTTGTGTTCTGCCCTCTTTATAACCTGAGACTTTGACACCAGGTGTAGATACTTATCTGGAGTTGGAAAGAAAAGTTCTTTTTCTGATACTCATGCCTAGCTGATAGTATCTGTTAGGCTGTTCTCCTTGAGGCTGGCTTTCCCTGGAGCATTAATTAGAGCAGCTCTGTTATTGTATTTCTGAATTCTCTTCCCCCTTTCCATAAATATTGGTCTTCTGTATTCTTGCCAGTTTTTGTGGCTTATGCCGCATAAAAAGCCAGAGACCCTTAACCCTGATGTGGACCAGTACTGCCTTTTCAAAATCTAAAAGGCTGTTACCACTATTAACTGTTCTCTGTGCTCCTCCATATAGCCTTAAAATGTGGGCTTTTGTGAAGACCACTTTGAAACATAGGAGCATTGAAACTTGGTTGGGATACTACCAGAACAGGTAGTTTTGAAACGAAGGACATGGTCTGTCCACTCGACATTGTCATTGGCAGTTGCTCTCTTAAAGCCCTTTCCGTTCATGAGGATTGTCAGGGAGGAAAATGGAGAAGCTCTGTTAATTTCTGGTGAGTAAGATTTGGGGAATGTTTGGCAATGGCAAGAAAAATAAATGACTGTGTTAGAATGATGTTTTCCATTGTTCATTGACTCCAATGTGCTACCTGTCTCCTTGCTGACACTGTGTGTGAAGGGAGGGAAAGGATGACTAGAGATGGGAATGAGTTTTGAAGAAGTAACATACAGTTTCTCAGTTGCTTAGGTCCAAAATTATGCTGGTTCAAATGAATCTGCTCATACCTTGCTTTATTGCTCTTCCCTTTACAGATACTGATTTTGATTGAAGTATGTACAGTTGTTGCTTTAGACATAATGGCATTGCACACTATAAAGCAACTACAATGTAGTGTAGTCTACATTGCATACCTTTTATATGCACTGTTCAGTTCAGTTCAGTTGCTCAGTTGTCTCCGACTCTTTGTGACCCTATGAACCACAACATGGCTGGCCTCCCTGTCCATCACCAACTGCTGGAGTCCATCTAAACCCATGTCCGTTGAGTTGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCTTTTCCAGCATCAGGGTCTTTTCCAGTGAGTCAGCTCTTCGCATCAGGTGGCC EMBV3_10326 CAGGTGGCATCCTTGGCTGGGCCTGGAGGGCAAGTGGAAATAGAACAAAACTTTCTTAAT Gene GeneID:511392|TGS1:XM_002692651:70_cdna Constitutive 0 NULL GeneID:511392 14 GENE TGS1 NULL trimethylguanosine synthase homolog (S. cerevisiae) EMBV3_14230 AAAGAAAGAGACAAGGCATGCCCAGATGCTGGCCGCCCTCCAGAGGAGCCCTATGGCACA Gene BVV0102_065911 + 0 NULL GK000008.2:92829468-92864675 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094940 TCONS_00118448 TCONS_00099660 TCONS_00013240 TCONS_00132043 TCONS_00243948 TCONS_00010615 TCONS_00098385 TCONS_00107397 TCONS_00031871 TCONS_00154811 TCONS_00169479 TCONS_00140493 TCONS_00185628 TCONS_00099835 TCONS_00143729 TCONS_00174545 TCONS_00199297 TCONS_00025106 TCONS_00025108 TCONS_00252175 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00056222 TCONS_00064981 TCONS_00013239 TCONS_00174540 TCONS_00169645 TCONS_00174543 TCONS_00044782 TCONS_00039773 TCONS_00221594 TCONS_00174544 TCONS_00110376 TCONS_00238548 TCONS_00110362 TCONS_00140494 TCONS_00169477 TCONS_00171161 TCONS_00013237 TCONS_00240489 TCONS_00088693 TCONS_00042245 TCONS_00137852 TCONS_00226267 TCONS_00243949 TCONS_00000314 TCONS_00073418 TCONS_00222044 TCONS_00135546 TCONS_00169478 TCONS_00154809 TCONS_00226268 TCONS_00094939 TCONS_00164253 TCONS_00042246 TCONS_00132044 TCONS_00171162 TCONS_00154810 TCONS_00117782 TCONS_00013238 TCONS_00042247 TCONS_00174546 TCONS_00031828 TCONS_00202430 TCONS_00154812 TCONS_00130398 44 XLOC_057600 XLOC_072614 XLOC_059903 XLOC_008038 XLOC_080693 XLOC_150314 XLOC_006166 XLOC_058631 XLOC_063307 XLOC_018116 XLOC_094549 XLOC_103372 XLOC_085141 XLOC_111681 XLOC_060078 XLOC_088149 XLOC_104638 XLOC_120950 XLOC_014669 XLOC_155116 XLOC_123974 XLOC_034025 XLOC_039705 XLOC_103408 XLOC_026264 XLOC_023590 XLOC_134908 XLOC_066280 XLOC_145215 XLOC_066266 XLOC_103753 XLOC_147153 XLOC_053479 XLOC_025624 XLOC_084061 XLOC_137960 XLOC_000088 XLOC_045183 XLOC_135353 XLOC_081769 XLOC_100173 XLOC_071948 XLOC_018073 XLOC_079107 Coding TCONS_00088693 XLOC_053479 Coding Coding - 18:16253891-16262851 - TSS66039 8960 3 TCONS_00088693_16 322 0.833816964285714 1 0 1.16138100847541e-05 7.96429858026615e-06 3.07256028026004e-06 4.42709753766115e-06 5.69941641360114e-06 9.36986144176691e-06 4.17213544200926e-06 7.63046551528769e-06 8.58928521701181e-06 0.00301046678642136 0.00239831088605626 0.0015763669782467 0.000227177578259478 0.00108690726800688 0.000384144385590756 0.000790121063971953 0.000515956829006995 0.000826027671964117 4.3811848144521e-06 3.31201459449274e-06 1.09063433137715e-06 0.000992635426179298 0.00198119839159111 0.00142769773920594 7.68687460946034e-06 8.69637334773621e-07 3.2494649242946e-06 0.00389999415994786 0.00174588384334866 0.00262377460897209 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2360 89.00 0.197767857142857 TCONS_00088693_12 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 4e-25 107 34.00 0.878228782287823 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 TTAAGTAGGCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATACAAAAGGAGGAGCCAAAGCGTTTTCTCTCGGACTCTCTCTCCCGCGTGCGTGCGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACATGGTTTGTCCAAGACCCGAGAGCTGTGATGTGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAAACAAAGAACCGAGGAACATACACTCGCGTGACATCTATGGTGCCGTGACTCGGATATAACCTGGCTGAAACAACCTCTGCATGGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGTGAAGCTCCCGCGCTAGAAGCGAAAGGTGAAGAAACTCAGTGCAGGGGAAGGCCCATCGTGCTGGAAACCGGGACAACGAAAACCGAACTCAGCACAAAGCTCACGCGGCCCAGTCTCAGATTCCAGAAGACCTCCAGTTAAGGTAAGAGGTCCTCGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCTTTCTTGTTTCCTCAAACCTCCCGCGAACAGGCGGGCAGCAGGGGCACAACTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACCCAAGCTGGTGGGGGTTCTTCTGTCCTTTCTCTTCTCTGTGCCAAAGATCAGACCAATGAAACTGTGAGCACCGGTCAGATATTTAGCAAATTTTCCGGCGGGCTATGAAGGGGATTCCTTGGCATGTTTTTCCCACTGCTTTTTCCTCTTGTCCTTCAGCTCTCTCCCGGGACTCAAGCCCAGCCAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAGATTTGTTAGGATCCAGAGAGAAGTCACCCTTCGGGGTATGAACCATTGCCGAGGGCAAGGGCTTCGGCCATGGTATTAGGCCTGGCTAGGTTTTGTGAGGGAATGGAATTCATATGCTAATGAGTGAGAGGATAATCCCAGCCATTGGGGAACCACCCATCCTCCCTCTTTTACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTGGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTCACTTGAAGTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACATTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCCCTTCCCTCCTGTTTTGTGCTCTTTTCCTAAGCCCCATCCAGACCCACAAGGTTGCCTCTACAATCTTCTGAAGAGACAATCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCTAATCCTACCCAATACTGGTCACATTGGAGATCTTGGGGACGCCCAAACTCCAGTCCCGGGGGTCCCAGGAGGTCATCACGCCTTGACTTGCCTAGGGATCGGTCTTCGAGAGGTTGTCACGCCTCAACCTGTTTGGGGATCCTCTAGTCCCAGGGGTCCCAGGAGGTCATCACGCCTCGACCTGCCCAGGGACCCAATCCTCAGGAGGCTGTCACACCTCAACCTGCCCGGGGATTCGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTGCACCCTGACCCAGGGACGCCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAGAAAGACTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAGCCTATTACTTGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCCATTGCCTTTCTGGAGAGGCTAAAAGAGGCGCTCCAAAAGTTTACCAACCTGGACTTAGACTCTTACGAGGGACGGGTGATTTTAAAGGACAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAGAAAGAAAGAGACAAGGCATGCCCAGATGCTGGCTGCCCTCCAGAGAAGCCCTATGGCAAACCCCGAGTCCTTGAGGGACAAGGCACGAGACAGATGCCTGATCTGTAGACAGGCGGGGTATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATCGGGCGACACTCTGCCCCCGGGACCCAAGAGCCTCAAGGTCAAGTGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGCAGCCCGCTCCAGCCAGCCCGCCTGTCACAGATAACCATCACGGGGCTGGAGCCAAGGGTGCAACTGGATGTGGCAGGTAGGTCTGAGAATTTCTTGATTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCAAAACCTGTACCATTTTGGGTGCTACACGAAAAGCAACTACTAAAAGATTCACCCGAGCACTTCTTTGTTGCTGGGATGGACAAATATTTTCCCACCAGTTTATGGTGGTCCCTGAGTGTCCTACCCCCTTATTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAACCCATTACACCTTCAATAGAGAGGGACCAAAAACTATGGGAAGACAAAATCAACCCCCAGGTGCTGGACGAGCCCACCGAGCTGAACCGGTCATCATTGTCCTCCGAGATCCCACTCGATTTCCTAATTGGAAACAATATCCTCTCAAAAGAGAGGCTCGGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGCTTGCGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCCCAGTAAAGAAAAAAGACGGAACCTGGCGAATGGTCCAAGATCTCCAGATCATAAATGAAAATGTAGTCCCCCTCCATCCCACAGTACCCAATCCCTATGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACCACTGACTAAAGAATCCCAATACCTTTTTGCCTTTGAGTGGGAGGCCCCAGGAGAAAAAAACCAACAGATGACTTGGACAGTATTACCTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGACAGGCCCTTAGCCGGGATCTCCTAGATCTGGACCTGGGACCTAATGAGAAAATATTACAATATGTAGATGATCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGATCGGGTACAAGAAATCCTCCAGTTGCCCTCCCCCACGACTTGAAAACAATTGTGAGCTTTCCTGGGACTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCGGCCCTTATATGAAAGCTTATAGGGACGAGATGATTCAATCCCACTGATGTGAGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTATGTCAATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCGATCCAACTTCCCGAGGTTGGCCCCCCTGCATTCGAAATATTGCAGCATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATGGGAGAGGCCATTTATGGATGTCTGATCAAAGAATCCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTCCCTACCCCTGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCCGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTAGATGGAAAAAGAAGAGCTGGGTATGCAGTAGTCTCCAATTTTGAGACCATAGAGGCTAAGCCTCTGCAACCAGGTACTTCAGCCCAATTAGCTGAGCTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAAAATAGCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGACCCCTTGACCACCCGAGGGTCCCCAATCAAATATGGTGGTCAGATTCTTCGACTCTTGGAGGCAGTCCATCTGCCCACTGAGGTTTCAGTCTCCCACTGTAAAGGACACCAAAAAGGGAACACAGAAGTGGCACGAGGGAACCAAGCATCTGATCAGGCAGCTAGGAGAGCAGCATTACAGAACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATTTGGGGTTAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGATAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCCTCCAAATACTACTAGAAAGGTCCTTCAGAGGAACAGGCCTCCAAACAACTATAAGACAGGTGGTCTCCTTTTGTCTCACTTGCCAATTAAACAACTCCCAAGGAGCTCAAAGACCCCAGCTGGCCCAGCCCATCCAACGATGTGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAGTACCTATTAGTTATGATAGATACATTCACAGGATGGATTGAAGGCTTTCCCACCCGGACTGAGAAGGCTGAGGAGGTGGTAAAAAAAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCCAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGCATTGGGCATTACTTATTATCTCCATTGTGCCTGGAGGTCTCAATCTTCAGGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCCGCACCTGCATTGCCCCTAAGGAACAGGTTGGTCTTAGTCCTTATGAGATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGACCATTGGGCAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGAACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCAAGAGTCAAGCCATGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGATACCTATTCAGAACTACCAATGAGTGCCATTCTAATGAACACCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGGATAACTCTAAGGAGCCAACAGAGCTTGACAGAGACTGTACTCCAAAACAGACAGGAGATAGATCTTCTGATCCCTAAACAAGGAGTGACTTGAGCTATCCTGGCGATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCGTGTTATGCTATATTGATGATGCTTATGATTATTCTATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTACAGCTGACCACGGAAAATATCACACAGCCTTGGACACCGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCACTGCCCCATTTCAGCAGGAAGTAGCCAGAAAGACCTCAACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGAATGTTAGGTAGTCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAAACATATAAAAGGAGGAGCCAAAGAGCTTTCTCTTGGACTCTATCTCCCACGTGCGTGTGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACACGGTTTGTCCAAGACCCGAGAGCTGTGATGCGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAGACAAAGAACTGAGGAACGTACACTCATGTGACAGAAAGCTAATTGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCTTAAAGGAAATCAGTCCTGAACATTCATTGGAAGGACTGATTTTGAAGCTGAAACTCTAATACTTTGGCCACCTGATGCGAAGAACTGACTCATTTGAAAAGACCCTGATACTGGGAAAGATTGAAGGCAGAAGGAGTAGGGAATGACGGAGGATGAGATGGTAGAATAGCATCACCAATTCAATGGACATGAGTTTGAGTAAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCGTGGGGTTGCAAAGAGTTGGACATGCCTGAGCAACTGAACTGAACACAGAAGCCACGTTTTTGGCCTCATGTTCTTCACCGTGAGTGTGCTTTCCAGTTCACTGCATCCCTCTCAGCCCTTCCTTTTCCACTTGACCTGCTTCACGCATTCATTCATCCTTTGTGGTCTTTTTGTGGCCTCTAACTCCTTGTTCATTTGTTTTAATATTTTGAGGGCTGTGGATCTTTTTGAGGATCAGTGGAAACTCTAAAATGACTCACATATCACACATAAGATAAAATGTTATATATGATTTCAGGATACTTAGAACTGCCCTGGATCCATCCAGGGATGAGCCCCCTTCTTGAGATGCACGGACCCCTTTACCTCAGTTATATTGAAGATATTTTGGCACACTGGAGTTGAAGGATTCTTTGCAATCTTCTGCTTCTCTGGAGTGGAGAAATCTCTGTCAGAGCTATCCACATGTAACTGTGCACGTATTTGTCATATACAAGGTCAAGTGCCCATATCCTCAAAACAAAGGGTTGTCCTAGCACACACAGAACATGATTAAGGGGAGTTGGCATGACTATCTGAGGGAGTATCCCTAAGGTCTTTGACAGTTTTCCACAGGAATCTGAAAAGAGATTGTCTTTGACCAGATTCTGGATAAAACCTAGACATAGGCATTGCTATTGAGCTGTTTCTTATCCTCATAGAAAAATGCATTTATTGAGAGAAAAGCCTCTTCCTGAGAGAAAAGGGGAAGAGGGTTCTTCCAAGAGGCTTAGAAGTGACTTTGCTCAGCAAATGGCTATTTATCCTCTCAAGTGATTGATAATATGCATTAAAAATCACCTTTGTGATTAGAGAAGAAGTTCTCTTAGTGGCTCCCTCCCAGGGGAAGGGTGGGGAGCTGGCTTTTATCAGAGCTCATCTTCCCAGGGAGGGTAGAGAATGAGGAACCCAAGAACAGTGAGCTTGGTCACCAAGAGAATTGAATTATAGTCCCATGAGATCATGCTGTCAGCTAGACTGCTTATCACATGTAAATCTGCTGCAAGCCTATGAGTTAGATTCTATTATTCCTGTTTTACATATACGGACACTGAGGCACAGAAAGGTAAGGTGATTTACCGCAGGTCACAAATCTTGGAGGCAATGGGTCAGGCCAACCTGACTCTGTCAAATACAGTCTTATCTACAATGCTGAGAGCTGCTCGGTGTGTGAGTGGGTGAGAGACTCAGGCTCCCCATATCAGCGTGAGTCATACTTGGTGGTGAAGGGAGGAGGAGGAGCGCAGGGCAAGATGCCAGCCAACTCCTGCAGCATCTCCTCCCTGAACGCAGCACCACAGAGCAGCAACTTCTCCTGTGAGAGGAGCCATAGAAGTTGCTTAAGGGAGCCCAAAGGGGATTCTATTCAGAATAGGAAGCAGACAGCCAACCTAAACTATCTCCCTGAAGGTGTGAAAACTCTTGGCTCTGACTTAATAACTAGTTACATTAACTTAGTACCTAAACTCTGCAAGGTCCCTTCTCTGGCATCATTTCATTTTCCTCTGAAATAACCTTGGAGCATTGCACATTTATTTCACCCACTTTTCTGCTTATACATTATCTTTCATAATAAAAAGGCAAAAGAATTCACATATACAACTCA TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 97374 TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 106333 EMBV3_29612 CAGCAGGAGAAGCTGCGCTGTGACTTTGAGATCCTTGTGGTTCCCTGGAAGAACTCCTCC Gene GeneID:100336823|LOC100336823:XM_002699391:394_cdna Constitutive 1 NULL GeneID:100336823 29 GENE LOC100336823 NULL cystatin E/M-like EMBV3_06058 CACTGAGATAACTGTTCTCTTCATCCCCAACTTTTGCCAGTAAAGCGGAAAAATGTCTGC Gene BVV0102_142086 + 1 EMBV3_23660 GK000001.2:41825525-41826467 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000396 TCONS_00000395 1 XLOC_000106 Coding TCONS_00000395 XLOC_000106 Coding Coding CRYBG3 1:41699876-41826559 j TSS197 10535 1 TCONS_00000395_13 2903 22 0.917012677412734 0.00305505765234594 0.00138083696285904 0.00164630809664394 0.00121970422593722 0.00131250686335635 0.000315434865482459 0.00110763013586437 0.000577697096978154 0.000427064195690275 0.000154533653009999 3.42789193407689e-05 8.1206523936129e-05 2.68639785412229e-08 0.000143712322391581 8.2951117342161e-08 4.52943974181428e-07 3.19848032436988e-51 4.82952302195508e-16 0.00143069738182378 0.00127458156547321 0.000333857025696623 9.9868181557187e-06 0.00028581527043715 0.000156090085854111 0.00277166860016776 0.00194099553481115 0.00192152352041984 0.000455628711296109 8.56392914365016e-05 0.000250767869885751 XM_002684681.2 LOC516526 PREDICTED: Bos taurus uncharacterized LOC516526 (LOC516526), mRNA. 0.0 1.847e+04 100.00 0.971903179876602 NM_153605.3 CRYBG3 Homo sapiens beta-gamma crystallin domain containing 3 (CRYBG3), 0.0 4392 81.94 0.421737066919791 TCONS_00000395_13 sp|Q68DQ2|CRBG3_HUMAN CRBG3_HUMAN Beta/gamma crystallin domain-containing protein 3; 0.0 1832 86.76 0.353427488804685 0 coding 0 0 0 0 -0.0878363861856996 0.614948187890828 0.000196716804457112 0.997564893284026 AGCCGCCTCAGAGCACGAGAAGGAGTAGTGCTGGCAGCCCGTCGCGCCCGCGCTTCTACCGCCCGGGATGGACTGAGCCGCGCCGGCCGCCCGCGCCGAGTAGCTCCTGCCCTCGCCGGGTCCCACGGCCCCGGACCGGGCTCCGGACACCGCCTCACGCGTTCCCAGCGGACGGCCTCGGACCGGCTGCCGCGCCGGGGAGATGTCCGGCGGCCGGAGAAGGGGCGGCGCCCCCTGGCATAGCTTTTCCCGATTCTTTGCTCCCCGAAGCCCTTCCCGGGACAAGGAAGAGGAAGAGGAGGAGAGGCCAGGGACAAGCCAGCCGCCCGCGCCGGGCCGGGACGCTGCCAGTGTTGAAAATGAGCCCATGAGCACAAGTCAGAAAAAGGAAAATATACTTTCATCAGAAGCAGTGAAGATTTCCCAAAGTGAGGACAGAAGGACCCAGGCCCAGCAGCTGATCACTCTTCCAACACAGGAAGATTCCAAAAAGCCCAACGACCTTTCCAGTTCCACTTCAGAGGCCAAAATCGGAGAAAGTGATAAACAGACAAAAGAAAGCTTCTTCCAGTTTCTAGGTAACTTATTCAATATCTCAGGAAAATCATCTCTCAGTGAAGCCAAGCAGTCTTCTTTCAAAGATGAACATGACAAACCTGAGAAAGACTTACGAAATCCCAGTCGTCATGAGGAAGGGGGCCAAAGGGAAAGTGCTGGTGGCTCCCTGAGAACCCAGGCGCTTCCAGCAGAGGAACAGTCCAGCTCAGCCGAGCTCTCAGATGCCTTTTCTTTGGATACAACACAAGACAGTGAACAGGAAACCAGTGACTTGCTGAAACAAATGGATGGTAAATCAGAGAGGCCTTTAGTAACATATGCAACCTACCGAGGCCCCAGACAAATTAAGAAGTATTTGAAGCAGCAGACAGTGTCCGAAACCGTGAATCCCTTAGACAGAGAAAATGCAAGTTCTGACTCTAGTACAAGCACACATCGTGGCCCTGGGAGTGAGATGGAGGCTGGAATGGTGTTATTACTGTCATCAGCTAGCACAGGCATACCTGTGAAAGGACAAGGGCCTGAAGGCCAGTTAGAAGACTCTGATGATAACGAAAGAGATCTCAACACAGGAAGCCATTCAACAAACAACCAAGGACTAGCCAACACGGCTTCTTCTAGGGGTGTTTTAAACAAAGCCTATCCTGGGGGACCCGAGACGAGTAGATCATCCCATTCTGTGACTAGCTCCAGCTCCACTGCTGGAGATTCTGACTCACGGCACCATTTGAGTTGTGCACCAGGTTCTCAGACTGACAGAAATTTGGGATGTTCAGCATTGTGTACAGAAAGTAACAGCAGCAAAATTCCTTACAGTCCGGACTTGGAGAGGACAGCAACACCAGGAACTGTGGTAAAACGAACCAGCTCCGTGATGAGTGATGGAACACCAGTGCAGGCTGAGAACTCTGCTGCTGCTGACTTCTCTTGTAGTAAATCTGATGGGAGTGACCCTACCACACTTAGAAGTGCAGATTTGCTAAGTCCAAATAAATCAATTAGGCGTGAAGCTCTGCAGTTGCCAGAGAGTAAGTGTTCTAACAAGCAAGCGGTAGAGAACTCATCAAAGCAGCCTGCCAATCACACCAGCTCCATGGCTTTCCAGAAACAAGCTGTAACAGACACAGAACTTGTAAATGCTGGAAACAGATCATCTGCCCAAGACACACAGAAAAATTTGGCTCCTGCAGAAATCAAGCCAGAAACAGAAAATACATCAGGTGAGGAACCCACTGCTTCAAGTCATGTCAAAGCTCCAGAAGATAGAATTGAGTCACTACACAAAGATACTGACCTACTTTTACTAACAGAAGTCAAAAACCTTGTTAGGCCACATGGCAAAGTGCCTCCCTTTAGGATGAATCAAAAGGAAGCTGCCTCTGTAAAACACACCAGTGAATCAGTAGTTGTAACATGCTTAGAAAATAAAATAGCCCCTGAACTGAATATTGAACTTAATAGAAATCACATTTCAGAATCCCTTCTTGACTCTGAGAGTCCTCAACAAGCCATAGCATCACCTGATGCCAGGACATCCCCCAGCCTTGGCCATAAGTCAGATTTCAGTGCTTCACACCCTACCTTTGTTTCCAGAGTCGGCATGCTGAGCCAGGTGGATATCCCTATTTTAAAGAATGAAGGTTCTTCTGTGCTTGTTGAAACTGGAGATGTCAACATTGTTGGTATCTCCAGTCAGCCTCCTCAGTGTCAACAAGAACATGTGGCAAATCATGTGGAGGCCACGGACAGGAAGAGTCTCCCTGCAGGCCTTCATTCTAAGTATGCACCTACAGCTCTTGAATCCAAGGAAGTTCTTCCTGACAGGGAGAAATGCCAGTTTCTACTAGATCTTGAAGCCAGTGACACCGACATAACTGCAGTGGACTTGAGCTTTGAGCCTGCAAGCTTATCTCAAGACCCTGAGAAAGCAGAGTCAGTGCTATCAAGCACCGCAGCAAGTGAGAGCACTGCAGACAAGCTTGATTCTTCTTTCTCCTTGGAAACCAAAACTGATAGCATTGCAGAAATGTTACCAGAAGCTGACATTGGTGGTCAGAACAATGTTCCTGTTGAGTCACATTCTGAAACAGGAAAAACTCTAAGTCTCTCCAAGATACCTGTTACCCGAACAGAGCCCAGAGACATTTCTCAGGATGAAATTTCTTCCCCACTTGACATCACAGGTGTGCCAGCAAATCCTGCTTTATCAGAATTGACTTCCCTAGAAGTTGAACAGGACAAAATTTTTCAGTTAGTGGATCATGAGGAAATTAAAGAGAAATACTTAGATGCCAGCCTTAAAGAGAGTTGCCAAACTGAGGTTTCCCCTTCTGCCTCCAAATATCAAGGTGTACAGGGAACAGAGGTGGGAGCCTGCCGTGCTCTACCTGCTTGTCTCCAGAGTAATAGACCTGAGACTTCACCTCCTGTTCATGATGAGAAAGTTACTAGGCAAGTGGCACAGAATTGTGCAGCCAGGGCTTCTATCATCCATCCACCTTCAGTTCCTTGTGGGAGCAAAAAGATTTTTGATTTTTCACAACTCAGCTTAGCTAATACTTCCCCCAAATTCCAAGAAACTGACAGCACAAAAGCCAAGTCACCTTTTCTGGGTTCTGGTATCAGTTTGAGAAAAGAGGCTTTTGCATCTGAGGATTCAAGTTTCCTTCCTAATCCTTCTGTGCTAAGAACAGAAAAGAGAGCCTCATCTCCCAGAAATAAAGAGGATGCCCATCCCCTAAGAGGTGGTACTCACAGCCTGCCTTCCTCCTCCAGTAACTCTGAAGTTAGCATGGTTAGAAGTTCATATAACCCCACAAATAATTTTAGTTCTGTAAAAGTTCCCATAGATGTCACACATGAAGGTGCCTCCTTAACTAACCTGTTGGACCCTAAAAGCTCTTATCTGGAATCAGAAACATCTGACCTCACAGGGGCAGAAGTCACCCCACTTCAGGACCATTTGGGAGATCCTACTGGGATGGTATCTCTTGATTTCCCAACCGCTGCCCAATTTGACAATCCCTTAGAAGCAGCGACTGGAGCAGTTGCTGGGACCCCAGCGTCAGTTAACAGCTCAAGCCAGCAGTGTTCTGAGGCCTCTGCTGAGCACACAGAAGCAAGGAAGAGAGCACATGCCCAACTTTTGGACCTCGAGAGTGATTTCTGTAAAAAGGCTGTTGCATTGATTGGGGAGGCCTTTAATTCTGTCAGGGAAGAGCTAAAATCCAAACACTCAGTCGGTACCTGCCAGGAACATAGAGCCATAGACAGCATAATGAATCCAGGTACCCTGGAAGAAGACATCCCTGAGAAAAACCCATCAGAAGTGACACTGACAGAGATCCAGTCCACAGAGCATTTGGAAGAGCAGGCTGTGGAAAACATACCTGAAGTCCAAGGGAAAGAAAAGGCCTGTGTTTCACCTGTGGTTGGTGAGAACAGTCTCCTTTTTAAATCTGATAAAATGAATGTATGTTGGTTGTTAGAGGACCGAGCTAGGGAATTAGTCAATCAGATTATTTATTCAGCCCAAGAAACTGTAGCAAATGATGCTCAGGGTACCTCGGATTCTGAACTTCAGGCTAATACTTCAGAAATTCTGAGGAGTGATAGTGTTCAGCCATGTGATATGGTAAGAGAGTTCTTGGTGTCAGAACAGGCCATAAATCAAAGCACATGTGAAATCAGTGGGAAAGTATTAGGTAGATTCTTTGCTGAAAGTAACTTAGGTAGTGACACAGAGTCAATAAGAGGAAGAGAAATTGTTCTCTATCAAAAATCCCCCTTTTCAGGAACTAGAGATGGGCAGTCTGATAGTATAAATTTGCAGGAATCAGATACTGTTTTACTAGCTGAAAACATACCCCTTACAGGGTTAGATGATAAGGCAAAAACACACTCGTTCCTCAAGGAGGACTCTAAAGAGAAAATGGGGACAGAGTGTGTTGATAATCACAAACCTGAGACAGAGGATACAAGAACTCTTGTATTAAATTTCAAATGGCCTCCATTTGTGAATGATGACACTCATGTACCTGGGACATCTAAAAGCAGCTTGTCTGATACTTATGTATGTTTATCTGAAAAAAGCTTGCCAGGACACAGTAACAAAAGCACACCCCTTGCAATGTCAGAAGTAGGGAAAATACACAAGGACACTGAAGTAAATATCGGAAAGATTGAGCTTATACCTTCCATGGTAGAAATGGGAAAACCAAATAAGAAGGACGCTGAGTTGAATATTATGAAATATGAGGCAGTCCCCCCAATGTCAGAAGTGGGAAGAGCACATAAAGAGGATGCCGAATTGAGTACCTCAGAAACTGAACCAACAGCTGAAATTCTTAAAATGCGAGAAGCATACCAAATGGATGCTGAAAGGTATATTGAAAAAACTGAGGGATTGCCTGCCACTTTAGAAATGGAAAATATTTGCCAAAAGGATGCTGAAGGGGATATTGCAAAGACTGAGGTGACACCTGTTACATTAGAAATGGAAAATATTTACCAAAAGCATGCTGAGGGGGATGTTGGTAAGACGGGAATGACATCGGTTGTGTCAGAAATGGACAGTATCTACCAAAAAGATATTGAGGGGACTGCTGAAAAGCCTGAGTCAATACCTGCCACACTAGAAATGGAAAGTATTTACCAAAAAGATGCTGAAGGAAAGGTGGACAAAACTGGGGTGATGTCCCTTACATTAGAAGTGGTAAATGTCTACCGAAAAGATGGTGAGGGGATCACTGCAAAGACTGAAGGACCTTTATTAGACTTGGAAAACACTTACCAAAATGGTGCTGAAGGGGTTATTAGGAAAACTGAAATGATGCCTCCTTTTGTGTTAGAAATGAAAGAAGCACCCCAGAAGGCAGTACCTGCTTCCTTCGAAATATGTAAGGGAGATATGAAGGAGACAAGTAGGGGAACTTTGTCCACACCCTCTAAGAGAGAAATGGAAAGCACGTTCCCAGAAGATTCTGATGGGACCATCAGGAAACACATAGTGTTTCCCACAGCAGTCAGCTCTGAGAAAATACCTGGAACAGGTCTGGAGTTGCCCATTACACAGGCAGAGGCCACATCTCCCATACCTGAGGCTGAAGAAGCATACCAAGAGGGTGCTGACAGAAGTGGTGGAGAAGTGGAGAAAGAGCCTACGGAAACGAAGACAGGCTGGATAGCGGGTGACACTAGACTTGCCTCGTACTTCAGGGATTATGAATCGCCTACCTTAAGTAAGGATAATGAAGGCCACCCAGCCTTAGCAGTGCCGGACTTTCAACCTGAGGGTACCATGGGAAGGCTGGACAGAAAAACATCTGTTACTACAGTATATAAGAAAGTAAGAGACCTACAGTATGGAGACAAAAAGGAAGAACCTAACTTAGCCTTCGTTTCTCAGGAGGAGCAAGAAAACTCTTCCTTTACTATACTGTATGAAGAGCCCCTCCAAAATGAGGACAAGTACACTACCACCGAGGTAAGACGAACACATTCCCTCCTGATTCCTCACACAGCTCCCAACAGCATGCCTGTCTTCGCCTGTGAAAGGTCTGAAAGTAGAACTGACCTCGTCCATCATTTTGAAAAGGAAGCCAAATTAGGTGATGCATTTGATAGTGACAGTTCAGAAACATTCTTATCGGTAGAGGCCAAAAGGTACAAGATCTATCCCTTGGCTTTGTCTCCCATTTACGAGGATGACAGCTCTCAGGAAGACATTCTGTCCAGCGAGGTCTCACCTGGTCGTCATGGTGCCTCGAAATCAAGAGAGAATGCAAGCCAGCAGTCTTCTGTATTATCGCTTCTCCAGTCAGTATCAGAGCGTTTAAAGATGAATTTTGATGAAGATGACAGACAGGAGGGCGGAGAAGAGGAAGAAGAGGAAGATGAGGAAGAGCCACTGCATAAAGGAAGTCTGAGAGCTCAAAGGCAGGAAACTGTTACCTTCAAGCAGCCGGATTCTTCTCTTACATTTTGCTCTGATGATGACCGGGAAAGTACTGGAGTCTCTAAGAATTCTTATGTGATGTCAAATGAGCCTACGACCTCTAATCTGCAGATTGGTCTATGGCCAGAAAAGGCCTCATTTCTACAAAAATCTGACCTTACTTCCAAACTACATTCTTCTCTAAAGAGTGCTTATCATCAGTATTTGCAGACCTCTAAAACCCATTCCTCAGAAAAAGGAGCCAGATTTGGTGGAATTTTTCAGGAACCAGTGTCAAAGTATTTCCGCACTCAAGACACCCCTGGCCGATTAAGCCCATTCACAGAGAATGTTGACAAACAAACTCTGAAATGTAACCCAAGACCTGGAAAGATGGTTATCTATGATCTCCATAGAAGAAAATATAAACAAGAGATCTACTGTAATATTCCTGATGCTACATCTTGGTCTTATCCGAATGGGGTACTGATAAAAGTTGTAAGGGGCTGCTGGATTTTATATGAGAAACCACATTTCCAAGGTCAGAAATGTGTTCTGGAGGAAGGAGAAAAGGTGTTAAATCGTGACTGGCTTCTTCAGAACAGAAAGCATCCACAAAGAAACTTTGTGTTGGGCTCTATCAAACGTGTCTTAAAGGATTGCAGTATTCCAGAGATAGAGCTTTGCCCACAGTCTGACCCGGCATGTTGCCCTATCTACATCCAGCGAGCGGTCCCCAATTTGGAAGAGCTGAATATCCCCAAATCTGTGTCCTTCACCGTGAAGTCAGGCGTTTGGCTTGCCTACCCAGATATTAATTTCAAGGGGCAAGCTATAGTTTTGGAGGAAGACCATGGACTCGTTGAGATTTCTGCAGCAGAAATTAAATCATTGCATCCACTTCAAATGGGTGGACTGAAAGTGGAAATGCCTATGAACTTAAAGGTTATTATTTATGAAAAACCTCACTTCCATGGACAGGCCAAAGAGTTTAGTGAACACATAGATTCTGTCCCTAATTTTTTAAAAAATGATGTAGATTTTCATGGAATTGGATCAATCCGTGTCATCGGTGGAGTATGGGTTGCCTATGAAAAAGAACATTTTAAAGGCCAGCAGTTCTTGCTCGAAGAAGGAGATTTTGAAGACAGTAATGCCTTTGGGGCATTAAGTGGTTCCATCTTGTCTTTCCGGTACTTACAAGCTAATTTCATAGAATCTTCAATCACACTGTTTGAATCTGATCTGGAAAGTGGGAAGTTTATTGACATTACAAATCAGGAAATTTCTGACTTAGAAGAAATTGGCTTTGGCAGTGAAACAAGGTCCATTCACGTTAAAAGTGGCGTATGGGTTGCCTACCAGCAGAAGTTCTTCTGTGGAGAACAGTACATTTTAGAGAAAGGGAAATACAAGTGCTTTTTTGACTGGGGAGGATCAAATAATACAATCATGTCAATACGACCCATCCAGTTGGAACCACTTGGGATAAATGAGCCTCCACATTTGCTCAAAGCTTTCAGTAAACCAGGGTTCCAAGGTGAATGTATCGATTTCACAAAAGAAGTTTTGGACTTGACTTCATCATTCATGCCATGTTCTTTTAAAGTTCTTCGGGGTTGCTGGCTCCTGTATTACCAAGAGGGTGTTTCCACTAATCAGTGTGTGTTAGAAGAAGGCCTCTATGCCGACCTTACTTCCTGTGGCTGCCCAACATCTAGAGTCAAATCCCTGAAGCCCATTGACTACGTTTTTGAAGAACCCTCCCTTAGCCTTTTTGCTCTGGAACACTGTGAGGGGAGAGAGTTACATCTAGAAGAGGCTGTGAACTCTGTTCTGAACAAGGACCTGCACTTCTACACCCAGTCCGTGTGGGTGAAAAGTGGACTGTGGATAGCTTATGAAGGACCCAATTTCTTAGGAAGACAAATCCTACTCGAGCCTAATGAGATCCCAAATTGGAGAGCATTCAGTGGATGGAAAACCATTGGTTCCCTCCGTCCTGTGAAGCAGCCCTCAGTGTACATCAGAATAAGGAACCGAGCCCAGGATGGGTACCTGACAGTCACGGGAAATGTGGCCGACACCAGGGCAACCTCTGTGTGCATCTCTCCCTACAGCGGGAAGAATACGCAGATCTGGCACTACTGTCGAGGACTCTTTAAATCCAAGGCCAGTGACACATGTCTCGATGTCATCGGTGGTCGAGACACACCTGGAGCTAAAGTCGCCCTCTGGACCGAACATGGGCAGTTCAGGCAGAAGTGGAGACTGAACAGAAATGGAACCATCAGCTCCTACCTCAGTGATCAACTGGTCCTTGATGTTAAAGGAGGAAATTATTATGACAAAACTCACGTAATTGTAAACCAGCCCCTGGAGGGAGAAGAAACACAGAAATGGGACATTGAAATATTGTGAGAGAGTCCGCAGTGTCCCTGGGAGAGCATGGAGGGAGGAGGGCCCTCATGCCCTGTGGAAACGACCTGCCCATCCTAGGCTCTGGGACCACTGAGTGGAATGGGCTTCTCCCCCAAACGTGAAGACTGTTGCTCTTCACCATGGAAGAGCTCAAAATATGCTTGCCAGCTAGTAGGCGTTCCTGTGAAGAATGCATTATGATGTCTGTGGAAGGTTCTACTCCCGCTTGATCTCCAGCTTCGGTGAGCAGGTTTTTTGAAGTCTGTTTTCTCTTTCTACCAAACACAAATCCTATTCCTGATAGTTACAGGACACTGCTGATGCTATCACCCTCTATTAGCTATTAACAACTAAGTGTGTAGCTGAGTGCCAGGCACAGGGAAGCGAAGTCCGACAGGTCAAGTCATACTTTTAAGAAGATGAATACTTTTTTCACAATATCTGAAAACATATTTAATAAAGCTTACTGTTAAGCTACTGTATTAGATATGCATTAAGAGTTCTCTCTTGAAGCTTTTATATGAAGTACCATAAGTGTTCACCTCAGCAAGTACAGGAGTGTTTTCTGTTGCTATTCTTTGCCTGATCCTTTAAACTAAAAATGCACAAATAGCCGGTGGCTGTCCCTTCTCTCTCGGATGACAACGCTAACCAGGGGTCACTCCTATCCTGGTGCTGACCCCCCCTGATCTACCCTCAAGTGTTTATAAGGAAGGACTCTGTCACCTACGTATAATAAATTTTCCTTTGCCTAAAGTAAAGGGAAATTTTAAGTTAAAACCAAGTAGTATTTCAGCCTTGACTATACCATTTTCCTTTACAAACTGTGACAAGAAACTCAGTTTTTCACTTCCATTTTAAATAGCTTTCATTCGAACAAAATCAGGTAGGATATTGTCTTGGACTTAGTCTCAAGTAAGCATTACCACCGTCACTATAGAATTCTCAAGCATTTTTCCCTCCTAAGTTTTAAACTTACACTGAGATAACTGTTCTCTTCATCCCCAACTTTTGCCAGTAAAGCGGAAAAATGTCTGCTCTATTTTTCTATAGAAAGATTAAATTTTCCAGTGATATTTTTAAAAATATCAATCTATATGCACTTTAGAATGTAAAGTAACAGTGAACTGTTTAAACTCAAAGACCCACTATTTTGACTATTTTTTATAGAGACTTGGTCTTTCCATGTAAATATTATTGGGGATTTTTTTTCCTTCAATCTCAGGCTCTTTCGTAATCTTTCAAACAACACCTGTAAAACACCCTTGCCCATAGATGTGAGTGCCTCTTATTAAATGCGGCAGTATTATTTAATGAAATTTGTTTTAGGGTAACTTTATTTTAATGGGGGGTGGGGGGGGGCTTGTGTATACACAAAGGTATGGTATGTATATTTTCACTGTAAAAAACCAAGTTAAAAAATTTTCATGTTAATTGTTGTTTAAAATTTTTCTAGAGCCAGTGAGGCTCTTTAAAGAAGTTATTTCTTCCAAAGAACACCAGGTAATGACAGTTAAATTTACATTTATTGGAGCTGTGCCTTTTCTACCACACTGGATTAAATAAACTGGTCGAAATATGGCTTTTGTCACTTTCTGGGACATTGAGTAACTTGCTGTTC EMBV3_15095 GTATGGGTTTTCTGTTGGTTTTTGGGCACAGTAGATGGAGACTTTGTAACAAGGGCTTGT Gene GeneID:528315|SH3RF1:NM_001098065:4_cdna Constitutive 0 NULL GeneID:528315 8 GENE SH3RF1 NULL SH3 domain containing ring finger 1 EMBV3_15281 TGCTATTTTGCGTGTCAGAACTGAAGAGTATAATGGAGTAGGCAGATCATCCTTTTACTG Gene GeneID:511281|ORC2L:NM_001101942:91_cdna Constitutive 2 NULL GeneID:511281 2 GENE ORC2L MGC140463 origin recognition complex, subunit 2-like (yeast) EMBV3_21848 CTTTCTCTTTCACTTCCTTTGCTGGTGTGAGCCATGGGGGTGTGTGTTTGTATGTGGGGA Gene GeneID:767919|AAMP:NM_001076995:130_cdna Constitutive 0 NULL GeneID:767919 2 GENE AAMP MGC127598 angio-associated, migratory cell protein EMBV3_38358 GATACGGCTGTAGATATGGAAGTAGATACGGCTGTGGATACGGCTCAGGATATGGCTGTG Gene GeneID:100296558|LOC100296558:XM_002684622:112_cdna Constitutive 0 NULL GeneID:100296558 1 GENE LOC100296558 NULL hypothetical protein LOC100296558 EMBV3_37348 AAGCCCTAGGCACTTGTGTCTCCCATGTCTGTGTCATTCTCGTTTTCTACTCCACAGCTG Gene GeneID:785144|LOC785144:XM_002707697:214_cdna Constitutive 0 NULL GeneID:785144 15 GENE LOC785144 NULL similar to olfactory receptor Olr95 EMBV3_32694 CTGACACTTGCAGTTTGGATTCCCGAGGATTCAGTTTCGACTGAGTATCAGACCAGGGAG Gene BVV0101_005914 + 0 NULL GK000010.2:76281375-76362022 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014770 1 XLOC_008361 Coding TCONS_00014770 XLOC_008361 Coding Coding SYNE2 10:76360054-76700012 j TSS10573 23891 1 TCONS_00014770_17 6919 0.0190866853626889 116 0.930064684651294 0.000927919300338208 0.00091608023135399 0.000589004702655462 0.000145280715555154 0.000422800159995976 3.32237888248724e-05 0.000119222157538181 9.58018878277123e-05 0.000146652998881121 0.000230358426844992 6.31835390561766e-06 9.39845835569626e-87 1.325838846601e-05 8.76900910581802e-05 0.000153770404739628 6.87580378285511e-06 7.33574028523744e-21 1.67313229779802e-122 0.00094593444995711 0.001203311016635 0.000385561251717086 9.23802249131468e-71 3.17076586743234e-22 1.38146858050121e-81 0.00119462885207273 0.00136452612076441 0.000604563561538823 4.93988077512342e-05 4.80299521251804e-30 1.21459508306751e-05 NM_001206586.1 SYNE2 Bos taurus spectrin repeat containing, nuclear envelope 2 (SYNE2), 0.0 3.903e+04 100.00 0.905864132937089 NM_182914.2 SYNE2 Homo sapiens spectrin repeat containing, nuclear envelope 2 (SYNE2), transcript variant 5, mRNA. 0.0 2.451e+04 86.07 0.872629860616969 TCONS_00014770_17 sp|Q8WXH0|SYNE2_HUMAN SYNE2_HUMAN Nesprin-2; 0.0 1.108e+04 80.81 0.999855470443706 0 coding 0 0 0 0 -0.247594644447187 0.132103212559069 0.00541854293031637 0.934667514856416 TGTGGGCATAGCTGGGTTCATGGCAGCCCTTATTCTGCCAGTCAGAGATATATGAGCATATGAGCCATCCGTTCACATGCCTAGTGTTATATTTCAAAAGAGCCAGGTGTGTCTCTGTTTGGCTTAGCATTACTTTTTATTTTTATTTCAAAATGTGGAGGACCTGTTTCAGTGTTCTTGCCCTTAGTCTAATTTGTGGATTTAAAAGTATATATTAATATCTAAATTGGCATGGCTAGGAGATGCTACAGGTAATTAAAAGGCTCTAATTAGGGGTATCTGAAAACATTTTGAGACACTTTATTCTGGACTATCTTAAGTGCACTAGATACAGTATGGAATATGGAACAACAGTCCTTTCACTTTGAGGACTTTTAACCTAGATGCCTGGAAGCGAACAATAATGAAGAAATTATCTTCCCCAGAGACTGTTGCCATGATGGTTTTGCAGCATTTATTATAAAAGAAGCAACCAATATAAAATAGAAACAAATTGAATAGAACAGAGAAGGAAAATAGCAGACAATGCTTTGTGGACAACGTCATTAATCCTGGAGACCTGCTCCACCCCATGGTTGATTTGCATGTATTACATCAGGCAAAATGGTACTATGGGAAAGATACACCAGGACAAGAAAAATCTTGTTATATAGACCACTGTTGTGAACCAAGCCTTTGATAATAAATAATGCAGACCTATGTAGTCCAAGAAGAGAAGTGATACTATCAGAACTGTTATCTTGGAATACAAGGATTGGTAGTGTGCCATAGATTGTGCAGTAAATTGGTAGTATGCAGTTTTTTAAAGAGTTAAGCTATTATCAAAATAATGTGCTTTTAAAACAACTTACCCAAATCATCCTGCTACAGAGGTACAGCTGTTTGAAATAATTGTCCCAAATTGTGGGTGCAATTTTCAGCTACTTTTTTTCCATGTTAACTGAATGCATTATCAAACCTCTTAATCTCTGCTTCTTACCATTTAGTTTGGGTCATAAGCACCAAATTTAACTAAGTAATCCAAGCAAGATTCTTGAACCATATAATACATATGAACTAGGACTTATAAAAAAAATAAATTTGCAACACAAACTCAGTAGAGAAATACTTTAAAGTCACTGCTTCTTCGGTGTGATGATAGTGAGTTGATACAATACCTTTCATTTAGGACCTCCAGTGCCTTAGTAATAACACTATAATAGCAGCACAGGAGGTAAGTGGGAGTCAACTGACATCATCCTGAGTCCAAAGGCATTGAGTAATTTGCTGGAAAATTAAACTGACACTTGCAGTTTGGATTCCCGAGGATTCAGTTTCGACTGAGTATCAGACCAGGGAGTTATATATCGGTGTAAGGTTGAGGCTGTTCTCCACTCCCCAGCTTCCAGGAAGGAGGGACCCTGCATTCTGCATTAAAAACAAGCGCCTCATCTTCCCGCCAGGTGACACTGAGTTCACTTCTTTAATTGAGATGAACATGATATAATCTCACTGAGTCAAAGGATGGCATCTAGTCCTGTGCTTCCCGCTGAAGACCAACAGGTTTCCTTGGGCATTGATGATCTCCATTTTTCATTGCAAGCGGAACAGGAAGACACTCAGAAGAAAACCTTCACCTGCTGGATAAACTCACAGTTGGCAAAGCACACCCCTCCCTCAGTTGTAACAGACCTGTTCACAGACATTAAAAAGGGGCATGTCCTCCTGGACCTGCTGGAAGTACTCTCAGGACAGCAGTTGCCTCGAGATAAAGGATCTAATACATTCCAGTGTAGAATCAATATAGAAAATGCTCTGACATTCCTACAAAACCAATCAATCAAGCTAATAAATATTCATGTTACTGATATCATAGATGGAAACCCATCCATTGTTCTTGGCCTCATTTGGACAATTATACTGCACTTTCATATTGAGGAGCTTGCCCGGACTCTTCCTGGCAATTACAGTCAGCCTTCCCTGGACAGTGTGAGTGCAGTTGACTCCTCTCCTACCTCAAGTCCTCCAGCCAAGAAATGCTCCAAAGTCCAAGAAAGATGGCGGATGTCTGCAAAGAAGGCTCTTCTCCAGTGGGCTCAGGAGCAGTGTGCCTCGTATGAATCTGTCAATGTGACAGATTTTAAGTCAAGCTGGAGAAATGGGATGGCTTTCCTGGCTGTCATTCATGCCTTGCGACCAGACCTGATTGACATGAAGAGTGTGAAGCATAGATCCAACAGAGACAATCTGAAAGAGGCCTTCAGAATTGCAGAACAAGAATTAAAAATCCCCAAAATGCTGGAACCAGAAGACGTGGATGTTGTTAATCCTGATGAAAAGTCGATCATGACCTATGTGGCACAGTTTCTGCAGTATTCAAAGAAGGCACCTGGGTCTGGAGATGAAGCCCAGGGAAAGGTGAAAGATGCTATGGTCTGGTTAGCTCTACAAGAGAAGAAGGTACATAAAATGCTAACGGATTCAGAAAATGAGACCTACTGTAAAACGTATGAAAGCCTGCTGTCCTTTCTGGAGTCATTCAACAAAGAAAAAGAACGCTTTTTGGATGTCCTGACAATAAAAAGGAATGTAGATGACCTGAATAAAGATCAGTTGCAGTTGAGAGAAGCCTGGGATGGTCTCAACTACCAGATTAACGTGTGGCAAACAGAGTTGAATCGTGTCTTGCCCTCACCCCTTTATCAAATAGAAACTTGGCTCCAGGAGGTAGAAAAGCTTATAGATGAAGATTTGTCAGTCTCCCAGGATTACAGTGAAGCCATGGCTCTAACACAAGAGAAAATTACTTTATTCCAGAGTCTGATGGATAAATTTGACTGCCATTTGAATACTCTCCTGGCGTTTGAAAATAGAGACGAAAACCATTTGCCTTTGGTACCCCCTGAAAAATTGGAGGAAATGAAAAGACGAATCAACAACATTTCGGGGAAAAAAGTCATTCCACGTTTAGAATTTCATTACTATGAGTGCTCAGTTCTTGGTTTGCTAGAGGAGGTGAAATCAAAATTGCTTGTTTGGAACATCAAATACGGGAGCAAAGAATCTGTGGAATTATTGCTGGAAGACTGGCATAAATTTATTGAAGAAAAAGAGTTCCTAGCTCAACTTGAAACTTCGTTTCAAAAATGTGAAGAAATTCATAACAACTTGGCTGGAGAATATCCAAATATTAGTAAACAATATACGATGGTGAAATATCATTTTTCCATGTATAGAGAAAATATACTTAATGTGAAGTCCACTCTACAAAAAGTTCTGGCATGTTGGGCTACTTATGTGGAAAACCTTCGTTTACTAAAGGCTTGTTTTGAGGAGACAAAGAAGGAACAGATGAAAGAGGTTCCCTTTGAGACACTCTCCCAGTGGAATCTACAACATACTACTTTAAATGAAGTGGGAAATTTCTTATTTCAAGTCAGCAATGATGAAGTTGGATCGTCTATTTCTAAAGAACTGAAGAGGCTGAATAAAAGATGGAGAAAGCTTATTACAAAAGCTCAGCCTGAAGTGAACCTGCCACTTATGAAATTACAAGATGAGCCCTTTCTTGACAATTCTGGAAATATTCAGCTATCCAAGGAAGAAAATCTAGCTGTTGGTTTTTCAACATATAGGTCAAGCGAACTTCCTGAAAACCACAATCAGAATATTATGGCTGGGGAAGTACATGAAAAAGAAAATGAAGACTTTTCAGGGCCACTGAAAGTGGCTAAAGAGGTTGAAAAGCTCATTGGACAAGTGGAAACCTGGGAGGCAGAAACCACGTCTGTTTTGGATCTTCTGAGACAGCAGGATGATGTAGAGACCTCAGTGGAAGAATCTTTGCAGCATCTTATTGCCAAAGGCTCTATGTATGAAGAGCTTGTATCTAGAATTGAAGACACTTTACAAATGGATGTACAACATGTTTCAAGTCAGGAGTCTCTCCAACATGTCCTCACAGCTGGACTTCAGGCAAAGATTCAAGAAGCTAAAGAGAAAGTCCAGATCAGTATGATAAAATTAGTAGCTGTGTTGAAGAACTCAACTGATGTTTCCCAAGACCTGGATGTCAGGCTGAAGGTGGAAGAAACACAGAAGGAACTTGAATCATACATTACAAGGGCTGAGCAGCTACTTGGGCAAAAAGAGAGCCAGAGGGGACTAATTACAAAATACAAGGAAGCACTGATAATTTCTAATACTAAAAGTCTGGCCAAGTATTTGAAAGCTGTTGAAGAACTGAAAAATAATGTAACTGATGACGTAAAGCTGTCTTTGGAAGAAAAGAGTAGAGACATTTGTGCCAAGTGGGAGTCTCTTCATCATGAAATGTCCCTGTATATTCAACAACTAAAAATAGACATTGAAAAAGGAAAACTTAGTGATAGTATTGCAAAACTTGAAAAGCAAATCAATAAAGAAAAGAAGCTAATTCGCAGAGGAAGGACCAAGGGTCTCATCAAAGAACATGAGGCCTGCTTTTCTGAGGAAGGCAGCCTGTACCAGCTTGATCATCACATGGATGTCCTGCGGGAGCTGTGTGAGGAGCTGACTTCTCAGAAGAGTCAACAAGAAGTGAGGAGAGCGCTCAAAGATTACGAGCAGAAGATAGAGAGGCTTCGGAAATGTGCTTCCGAGATTCATATGACACTGCAGCCCACCTTGGGAGGCACATCGAAAAACAAGGGAACCACGGATGCATCTAAGAATGGAGGAGGGAATACCCTCAGCGAGGTGCCATCTGCAAAATCAGACAATCAGCCGTCAGCTGAAAAGGCAATGGAATTGGTTCAGAATTTTCACCTGGAATCCAAGTTGAAGCTGCAACAGGAGGAAAGCATCATGGAGAAATATGAAAAGGGTCACAGTACCTCTATTGACAGTTTACTAGAGAGGTATGATACACACAAAGGCACTCTTGAACTTTACCTGCAAAACAGCATTGCCAGAATTACTTCTGATTTCTCTAGTGACAAGGAAAGGAGTAGTGTTTGTCTCCAGGACAAACTGACAGATCTACAGGTCTTAAAAAATGAAACTGATGCTTGCTGGAAAGAGTTTGAAATCACTTCATTGAAGTTAGAAGAGCTTGAGAGTGACATTAAGAAGCCTTTTATAGTTAAGGCAAGAGACAAATTAAAGGAGAAAGAAAGAGAGCTTCAGATGGCTCTTAAGTCCAGAATGGAGTCTTTAGAGACTGTACTGAAGATGGTGTTACCCATGGAGAAGGAGTCACTGCTTCTCTGTGACACAGACCTGCTCCTCCGTGAAATGGCCATTCAGGAATTTCATCTCACTGATGCTGATGACATTTATCAAAACCTGAGGAATATCCAAGATTCCGTAGTAAAACAGATTGAAACATGTAAGAATTTGGGACAGTCAGGCAACTTTGCATTAAAGGAATTGCACCCCCTTGACCTGCATGCAGCACAGAACATTATTTTGAAACACAGAACACAACTGGAAGAGATGAACCACAGAGTACAGAAGAGTAAAGATGCTCTCGAAGCTCTGGAAGATTTTTTGGCTTCTCTGAGAGCAGCTGAACTCTCTAGTGAGCTTCTTACAGACCATTCAGCCTCAGATTCACAGGGGGTACCGGCAAATACTTTGACGGTGGAAAATAAAGAGAGAGAAATTCATCGGATGAGAGACAAGGCCAGACATTTGGATGAGCATTTGAAGATGCTTGGTATAAGCATTAAAGACAGTGAACAGGGTGAAAACACTTCCTGTGAAAAACTTCTGGATGCTTTGTCCAAAAACTTATCTGAGACACGTTCTGGTGGGCAGGAGGAAGTCACTGAAGAAGACAAATTACTAGGGGCTTGTGTTTCTAAGAATGATGAACTCCTGAAAAATATTCAAGATGTGCACAATCAAATCAGTAAAATTGGCCTGAAGGATCCGACTGTTCCAGCAATAAAACAAAGGAGAAAATCGTTAATCAGACTGGATAAGGACCTAGATGAATATGAAGAAGAGAAGAAACACTTGCAAGAAATGGTGAATTCTCTTCTGCAATTCAAAGATGGCAGAAACAAAGCCCTGAGTCAAAGGTGCCAGGACACAGCAGTCTTGTGGGAGAATGTAAAAACCTTGGTCACAGAATGCCTTGACCAATGTGAAAGAGTTTTGGAGCTCTTAAAACAGTATCAGAATTTTAAAAGTGTCCTGACAACATTGATTCAAAAAGAAGAGAATGTCCTCTCCGTCCAGGCTTCCTACATGGGAAAGGAGAACTTGAAGAAAAGGATAGCAGAGATTGAAGTTGTTAAAGAAGAATTTAATGAACACTTAGAAGTTGTAGACAAGATTAACCAGATCTGCAAAAATCTGCAGTTTCATCTGAATAAAATGAGAACCTTTGAAGAGCCTCCTTTTGAGAAAGAAGCTAATATTATTGTGGATAGATGGCTTGATATAAATGAGAAGACAGAGGACTACTATGAAAATCTTGGTCGAGCTCTAGCTTTATGGGACAAACTTTTTGACTTAAAAAATGGAATTGATGAGTGGACTGAAAAGGTCCTTCAAAAATTGGAATTACATCAACTGACTGAAGAGGAAAGAGAAAAACTGAAGGAAGAGTTACAAGTCCATGAACAAAAACCTTCAGAATTTTCTAAAAGAGTGGCTAAAATACAATTCCTGCTTCAAAGCAGTGAAATACCTCTTGAATTACAGGTGATGGAGTCTTCTATTTTGAACAAGATAGAACGTGTGAAAATGTGTTTAATGGGAGGATCCCACTGTGGTGCAATCAGCGGCAGCACAGCTGAGCTAAGGGAAGATCTTGACCAGGCCAAGACCCAGATTGGAATGACTGAGTCTCTCTTAAATGCCTTGTCGCCTTCCGACAGCTTGGAGATCTTCACTAAACTCGAGGAGATTCAACAACAAATTCTACAGCAGAAGCACAGTATGATATTACTTGAGAATCAAATAGGTTGTCTGACTCCTGAACTCTCTGAATTAAAAAAGCAATATGAAAGTGTCAGTGATTTATTTAATACCAAAAAAAGTGTTTTGCAAGATCACTTTTCTAAGTTACTGAATGATCAGTGCAAGAACTTTAATGACTGGTTTGGCAGCATTAAAATGAACCTTAAGGAGTGTTTTGAACCATCAGAAACAAAGAAGTGTGTGGAACAAAAACTACAAAAACTTTCTGATTTCTTGACTCTTGAAGGAAGAGGCAGTGAAATACAGCAAGTGGGAACTGTACTGAATCATGTGAAAAAACATCTGCCCAAAGCACCTGTTAAGAAGCTTAACAGTTGGATCGTAAGTCAAGAAGTTGAATTAGAAAAAATGGAGTCCATATGCCAGGCACGAGCAAAGGAGCTTGAAGAGTGCTTGCAGCAGCTACTGAGACTCCATAATGACCACAGAAACCTGAGTAAGTGGTTGACTAATCAAGAAGAAATATGGAAAGAAATGGAAGGAACACGAGAGAAAACGGAGCTATTTTGCCAAGCTGTAGCTAGAAAGAGAGAACAATTCGAATCAATGGCCCAGTTGAACAACTCTGTGAAGCAATATGGGATTACTGAGGAAGAAGAAATAGTAACGGAATCAACACATCTGATTGATAGATACCAGACATTATTGAGACAAATATGTGAAACTGACAAAGAGGATAAGTTACCTCCTGCCGAGGACCAGAGTTTTAATGATCTTGCACATGATGTAATTCATTGGATAACAGGAATTAAAGAATCCCTTATGGTTTTGAATTCATCTGAAGGCAAAATGCCACTTGAGGAAAGAATCCATAAAATAAAGGAAATCATTTTACTAAAACCTGAAGGGGATGCTAAAATACAGGCCATCATGAGTCAGGCTGAGAGCAGCAAGACTCCAGTGGTTCCACAGACCCTCACTGATATCAAGAACCAGTGGGACAACACGCTCCATTTGGCCAACACGTATCTAAGCCATCAGGAAAAGCTTCTACTAGAAGGCGAGAAGTATTTGCAAAGTAAGGAGGATCTGAGATTAATGCTCACAGAACTGAAAAAGAAACAAGAAGTGGGCTTTGCTCTGCAGCCTGGTTTGCAGGAGAAGAAAGCTCAATTAAAAATTTATAAGAAGTTCCTCCAGAAAGCACAGGATTTAACATTCTTACTAGAGGAGTTAAAATCTCAAGGGAATTACCTCTTAGAGTGCACTAAAAATCCCAACTTTAGTGAAGAACCGTGGCTGGAAATCAAGCATCTACATGAGAGTCTTCTTCAGCAACTGCAGGATTCTGTGCAGAAACTAGAAGGTCATGTTCAAGAACACGACTCTTACCAGCTTTGCATCACAGACCTGAACACTGCATTGGACTATATCGCTAAGGAATTTGTCTGTTTTTCTGATAGGCCTGTAGATGAAAGAGTAGTTGAGGAAAAACTGCAGAAACTGCAGGACCTAGAGAATAGTCTCCATTTACAAGATGGCCCATTAGAGAAGATTTTAACTTTAGCAAAGTCCGTCAAGCAAAATACATCTTCAGCAGGACAGAAGATTATTAAAGATGATATAAAATCACTGAAGTGTAAACAAAAAGATTTGGAAAACAGACTTGCATCTGCTAAGCAGGAGATGGAAAACTGTCTCAACAGCATTCTCAAATCAAAATGCTCAACAGAAAACAAAGCAAAGTTTCCTCTGCCAGGCAGAGAGGAGCAGGTCACTTCTGATGTACAGGAGTCCACTCAGGACTCAGCTGCAATGGAAAAGTTGGAGGAAGACTGGGAAATCAATAAGAATTCAGCTTTGGAAATGATTTTGTCAAGACAACTTTCTCTTGATGTTCAAGAAAGCATGAAAAACACTGAAGATGAGCAGAAAGTCAATGAGCTGCAAAATCAACCTTTAGAATTAGATGTTATGTTAAGAAATGAACAATTAAAGGAGATAGAGGAATTATGTACCCAGTTGGAAGGAAAGAAAGCAGCCATTGAACCTCTAGAACAAAGTGAATATCTCAGCAAAACAGAATCAAGTGCCTTGGTTCTCCACGATGAAAGTTATTCAGTGCAGCACTTGGATAATCTGCTTCAGGCACTTATTACTTTGAAGAAAAAGAAAGAAAGTCAATACTGTCTCCTTGAAGATTTTCAGGGACATCTCATGGCAGGTGAATCCTCCATGAAAGCCTTGTTGACAGAAAAGGAAAGTCTGAAAGTGGGACTCCTGGACAGTACAACCTATATGGACAAAATTAAAAATTTTCTGGCATCAATAGAAAAAGAGAAAGATTCTTTAAGCAAGATGAAAATCGAATGGGAAAATTTATCAAACTGTCTGACTGACATGGATAAGAAGCTATTGGAAAGCCAGATCAGGCTACTTGAGCATGGTTGGGAGCAAATGAAACAACTGGCTCAGAAGAAGTATTCTCAACAATCAGTGGGACACGAAGAGTTTATGTTTCTCATGAGTAAGATTCAAGACCTTGAAACTTCCCTGCAGCAGCAGCAGCAGCATCTGCAGTTAAGGCTGAACTCTCCAGAAGCCCAGGAAGGGAATCTAAGCGTGGTTGCTTTGGCCACTGAACTCCATACTATAAAGCATAGGTTTTCTATGCTCAAGGGGCGAGCTGAACTTCAGATGAAGAGGATTTGGGGAGAAAAAGAAAGAAAGATTTTAGAAGATGCAATAAGTAATTTGCAGAAGCAATTGGAAGCATTGGAACCATTAAACATGGAGGTGGAAAATCAGATCAAGAAGTGTGAAACCAGATACAAAATAAAAGAGGCTATCTTATGGGTCCAGAATCTGTTAGGGGAACTCACTCCTCCCATTTCCCTTCTCCCAGATGATGTTCTTTCACAGATCAGAAAATGCGAGGTGGTGCACGATGGCATTCTAGCTAAGCAGCAGGTTGTGGAGTCGTTGGTTGAAGAGGTCAAAGATAATATTCCTAACTTCACAGCATATGAGAGCAATGATTTCAATAACCTCCTTCAGGACTTACAGAATCAATACCAAATGCTGGCTTTAAAATCAACCCAAAGATCACAGCAATTAGAACTTAAATTGGAAGAAAGAAGCAAATTTGTTGCCATAATAGGGAAGGTTCAACTTTCACTTCAAGGAAATGAAACACTGATAATCCCCAAGACAGATACAACCTCCACAGAAGCTGAACTAGAACAACTGTATGTTGCTTTGACCACTTCTCAGAAGGAATTGCAAGAAATTAAGAGTGTAATCTCGACACATCTTCAGGAACAAACAAACATCTCTAAGGATCTAAGTGTATTTGAAAGATTATTTCTAGATGATCGATTGAAAAATCTTAAGACTAGAGCCAACAGAACTCAAAGATTCATTCAAAATAAGTGTAATGAAGTAGAACACAAGATAAATTTTTACAGAGAATTTCATGAAAAAATATCTGCACTTCAGAAGGAGTTTGACCATATACAGCACAATGAACTTCTACTGAATCCGGAAGTAAATCCAGATGTTAAAGAGGAGTTGTATCATCTTAAAAACCAAATCACTGGCATTCAATCTAGTATCCTACAAGTACTGAAACTCAAAGAAGTGTTTGACTGTATAGAACTAAACTGGGATTGGACCCAACTTGATCAAATACAAACCCAAGTACTTGAAAAAGAACGAGAACTTGAAGAAAAAATTAAGCAGTTGAATACGTTTGTGGCAGAATACGACAAATATCAAGCATCACTAGCTAAACTGAAGGCTTTGGATTTACAAATTAAGAAAAGGGCTGAACCAGTACTAACAATGCCTAACACTCCACCAGAAAGCAGTCTGCTCAATGCTCAAGTTTTGAATCAGAGAATTGGGAAAGCCATGAGCTTGTATCATGAGATTATCAAGAAATTAAGTGAAAATAAAGACTTTGATGACTTATTCAAAGAGAGAGAAATACAACAACTAAAGCTGTATGCAGAAGAACATAATAAGTTGCGCCAGGTTCTCCAACAAAAAATGGCCCTGCAATCCCAACTGAAAGAAATGGATGAAAAGGATTTTAAGGACAAACTAGAAAATTCTTTACATGTTTTAAATCAGATAAAATCTCAGTTACAACAGCCATTGCTTATAAATTTGCAAATTGAATATATTCAAAATGAAAAAGATAATTGTGAAGTGTTTCAGGAAAAAGTTCAGGCAGAAATGGATAGCATTAAAGCTGTGACTGTCATTGAGAAGCAAAGTGAGGAAAATTCTTCTGAAGCTAGTGTTGTGGAAGCAAAATTAAATGACATTGAAGATCTTTACATGCAGCTTAATGCAAGCATTGATTCCCGCACTAGTGTCTTGAATGATGCTTATGAAAATATGACACGCTATAATGAAGCAGTCTCCAGGGCCATGGGGATCATCTCCGATCTGGAAACCATCATTGTGTCGCATAGAGTAGATCTTGATAATCCGAAAGAATCAGTGGAGGTGCCTCGCCAGAAACAAGAGGAACTGAAATCCACAATAGCAGGCATCCAGGACCTCACCGAGAATCTGGGGACCGTCTCCAGCCTGGAAGCTAAACGACAACTTGAGTGCACTTTACAGGACTTAGTTTCTAAGAACTCAGCCTTGAGGGAGGCAGCCAAAGTAAAGGAAGCTGAAGTAGAAAGGTGTCTTGACAATTACAAACGCTATAGGAATATAAATGAGAAAATTTGCACGAACCTCAGCCAGATGGAGACCATTCTTGGGCAGTCCATGTGCCCCTTGCCAGTATCTTACAAAGAAGCTTTGGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAAATCTTATGTCAGCCAAGGAAGAACTGCTGAAACAACGACAGGTCCTCAGACACTTGAGAGCCATGTGCACGGACAGTGACAGCCTCTGTTTGCTCAGAAGCACATCAGCTCTGTGGGAGAGATGGCTGAGTTTGCTGGAAGCTGCTAAAGAGTGGGAGATGTGGTGTGAAGAACTGAAGCAGGAGTGGAAATTTGTCCATGAAGAAATTGAACGAGAAGTAATTATCCTAGATAATCTTCAAGAAGAAGTTCCTGAAATTTCCAAAGCAAAAGAGGCAGCCTCCACAGAGGAACTCTTGGGGCTGCTGGACTGTTTACGCCAATACGAGGAGAATGTGGAGCAGCAACAGCTGTTACTGGCCCTTCTTCTGCAGCGTATAAAAAATATCCAGAGCACTCCTGAAAGCTTGGGGGCTGTGGAAAGTGTTCCTGCATCTCAAGAGATTATGTCCATGCAAGAACGATGCCACAAGCTTTTGCAGAAAGCACAGAAAAATAAGGAATTGATGCAGAATGAAATCCAAGAAAGACATTCCTTTACAAAAGAAATAACTACTTTGAAGAATTTATTTCAACAGACCACAATCTCTTTCCAAAATATGGAATTACAAGACTGTCCAGAAAAGGCAGAACAGCTTGAGGAGCTTCAAAGCATTCTTAAGAAAGGGAAGCTAACTTTTGAGAATATTATGGAAAAACTGCGAATCAAGTATTCTGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGAATGCAGAAACGCTTTAGAAGACGTAGATGAGAAGATTAGCAACGAAGTCCTGAAAAGCTCACCGTCGTATACAACGAGTAGAAAAATAGACGAAATTAATAATGGGCTTCGTAATGTCGAAAAGATGCTACAGCAGAAAAGCAAAAATATTGAGAAAGCTCAAGAAATTCAAAAGAAAATGTGGGATGAGCTTGATCTCTGGCATTCCAAGCTAAATGAGCTGGATTCTGAAGTTCAGGACATTGTTGAACAGGACCCAGGACAAGCTCAAGAATGGATGGATAAATTGATGATTCCTTTCCAGCAGTATCAGCAAGTATCACAGAGGGCAGAATCTAGAACCTCACAGCTAAACAAGGCCACAATTAAGATGGAAGAATATCATGATCTTTTGAAGAGTACTGAGGCTTGGATAGAAAATACCAGTCGTTTGCTGGCTGATCCTGCAGACTATGACTCTTCAAAGACACTGAGTCACCATGCTAGCACCCTTCAGATGGCTTTGGAAGATTCAGAACAGAAGCACACTCTTTTACATTCAGTTTTCACGGATCTCGAAGACCTGTCAGCGATTTTTGAGACAGATGACTTAGCACAGTCCATACAAGAGTTAAGTCATCAAGTAGCAGCTTTACAACAAAGAATCATAGAAAGCCTTCCACAGATTCAGCGAATGGCTGATGATGTGGTTGCCATTGAAACAGAAGTAAAATCAATGGAGAAGAAAGTTTCAAAAATCAAAGCTATCCTGTTATCCAAAGAAATATTTGATTTTTCACCTGAAGAACATCTTAAGCATGGAGAGGTGATACTGGAAAATATACGTCCCATGAAGAAAACCATTGCTGAAATCGTGTCTTACCAAGTGGAACTGAGGTTACCCCAGACAGGAATGAAGCCTCTGCCTGTGTTTGAGCGGACAAATCGGCTTTTACAAGACATAAAACTGTTGGAAAACGTGACTCAGGAGCAAAATGAGTTGTTAAAGGTGACCATAAAACAGACAAATGAATGCAATGAAGAAATGGAAAAATTGAAGCAGATCTTAAATAATTATCCAGCTGAATTCTCCCATGAACATATGTCAACAGACCAAGCTGCCAACCTGTCACAAGTACAGGGAGAAATCGAAGGTATGGAAAAGCAGATTCTGAGCTTGAATCAGAAGAAAGAAGACCTGGTGGTGGACTTGAAGGCTGCCATACTAAATCTTCACCAGCATTTACAGCAAAAACAGCAAGAATTAGAACAGGAAGTGCTGTCAGTCGGGGCATCCGAGGAGAATACAGGGGCTGAGAAGGATGCTTCTGAGTGGAAGTTGAACAGAACGAGTTCCATGTCCTTCCTGCCAGCACTCGAGGAAGAGGCAGAAGAGAGCTCTCTGAAGAGTGAAAGTGGAGATAAGAAAGCAGAGCCGTCTTCCGGGTTCCTGTCTTTACTCTGGAAACATGACAAGGACGTGGAGGAGGACAGGGCATCCTCATCCTCTGGAACAATCATTCAGGAGGCAGCTGGGAAAATAAGCACATGTGATAGTTCCATGGCACAGGTTCTTGAACCAGACCTGCTGAACACTGAGCGAGGCCCAGAATTTTCCCTGAGCCCCAACCAAACACCAGAGGGTGCCACACCTCCCATCAAGGCTGCAGCTACTGGCCTTTCGGACGAGCAAGGAGCTTTTGAGGCCACGGTGGAGAAAGTGAGGCCCGAGCCTGCAGAAGTCCTCCATGTCTGCAAGAATCAGGTGGCTGAGCTGGAGCTGTGGCTGCACCAAGCCAACGTGGCATTTGAGCCAGAAACATTAGACGCAGACATGCAACAGGTGGTGGAACAGCAGTTGGTAGGGTGCCAGGCTATGCTAACAGAGATTGAGCAGAAGGTGGCCTCTCTGTTAGAGAATTGCAAAGATCAGGGCCTGGGAGACAGTGGAGCCACTCAACAGGAGGCTGAAGCACTTTCCTTGAAACTGAAAACTGTGAAATGCAATTTGGAAAAAGTCCAAATGATGCTTCAGGAGAAATACAGTGAGGACCAGCATTCTACCACACTAAAGAAATCTTCAGAGCATCAGAAAGTTCTCCAACCAGATAACCTTTCTGAATTTGAATCTGTTGTTACCGAAAGGCCACAATTCAGTAGACAAAAAGATTTCCAGCAGCAACAGGTTTTGGAGTTAAAACCAATGGAACAGAAAGATTTAATCAAATTCATAGAATTTAATGCTAACAAAACATGGCCCCAGTATTGCCAGCATGATAAAGATACAACTCAGACATCATCTGCAAGCAGTAAAACATCTAGCCCCCAAAATGATGCTCCAGACTTGATCTTGTCAACCCAGGGCCAAAGTGGAGATAAGTGGCAATATTTACACCATGAACTCTCATCAAAAATAAGGCTCCCTCTCTCTCAGCTTGTACAGCCCCAGGTTACCACAAATATGAGTATTCTACCCAGTGTGACTGTGTATAACTTTAGATACCCAACAACCGAAGAACTGAAAACTTACACCACCCAGCTTGAAGACCTGCGTCAAGAAGCAAATAATCTTCAGGCACAGGAAAACACGTCAGAAGAAACGTACACGAATCTGGATAAGAAATTATTTGAACTGTTTCAGACCCTCCTTCAGTGCCTGGGCAGTGTGGAGGACATGCTGCAGACACCTGGGCTCTTCAGAGGGGATGTGGGTACCCAGCAGGTGCACTACGAGACATTGGCTCTTGAGTTGAAAAAACTTTACTTAGCTATGAGTGACAAGAAGAATGACCTTTCAAAAGCCATGACTTGGCCTGGCAAGAACGCCAGCCAGTTCCTTGACTGTTTTGATAACCTCCAAGTCTACCTGGAGCACACCCAGGCTACAGCTGCCTCTAGAAGCAAGGCTCTGAAAGCTGGCCTCGACTACACCCACAGTTATCAGAATGAAATAAAACGATTATATGATCAACTTGTTAAGAATAAGACATCTTTGCAACAATCTTTGAATGAAATTAGTGGCCAGACTATTGATGAACAGCTTCAGAAAGTGGATGCATATACAGTGGAGCTGCAGAACTCTGAGAGCCGAGTGGCAAAACTAAGAGATGAAGGAGAGAGGCTTCATTTACCTTATGTTCTCCTCCAGGAGGTTTACAAATTAGAGGATGTCCTTGACAGTATGTGGGGACTCTTGAGAGCCAGGTACACAGAACTCAGCTGCCCTTTCATCACTGAGAGCCAGCAAGACGCTTTGTTGCAAGGCATGGTGGAACTGGTGAATATCGGGAAGGAAAAGCTTGCTCATGACCACTTACAGCAAACCAAAAGTAAAGTTGCCCTACAGGCTCAAATACAAAATCACAAGCTTTTTTTCCAGAAGCTTGTTGCTGACATGCTCTTGATCCAAACATATTCCAATAAAATGCTTCCTTCTTTAATGCAAAAGAAAGAAACATTTGGGGCAGAACAAGTCAAAGAAGTTAAATTGCTAGAAGAAAAGTCACATCAATATGGAATAAAGCTACAGAGTTTACTGCAGAAATGGGAAGAATTTGATGAAAACTACGCATCTCTTGAAAAGGACCTGGAAATTCTTATGTCTACATTGCCCTCTGTGAGTTTGGTAGAAGAGACGGAGGAAAGATTGGTGGAAAGGATTTCATATTACCAGCAAATAAAAAGAAACTTGGATGAGAAGCATGCCCGGCTTTACCAGACTCTGAATGAAGGTAAACAGCTGGTTGCATCCGTAAACTGTCCTGAACTAGAGGGCCAGATTGCAAAACTGGAAGAGCAGTGGTTGTCCCTAAACAAAAAAATTGATCATGAACTACACAGACTACAAACACTTCTCAAACATCTGCTCAGTTATAACAGGGATTCAGATCAGTTAACCAAGTGGTTGGAGTCTTCTCAGCAAACTCTGAACTATTGGAAAGAGCAGTCCCTCAATGTGTCTCAGGACCTGGACACAATCAGAAGCAACATAAACAATTTTTTTGAGTTTTCAAAGGAAGTTGATGAAAAGTCCTCCTTGAAGACTGCAGTTCTAAGTACTGGAAACCAACTCCTTCACCTGAAGGAGGCTGATACGGCAACACTGAGAGCTTCTTTGGCACAGTTTGAACAAAAATGGACAGGGCTCATAACTCAACTTCCAGACATCCAAGAAAAACTTCACCAGCTTCAGATGGAGAAATTGCCATCTCGTAAAGCAATCATGGAAATGATTGACTGGATGAACAACGTGGAACATCAAACTGAAGATGAAGACTCTGAGCATTCACTGAGTTCTGCATCTCAAGTTAAAAATCTTCTTCAAAAGTACAAGGAGTTTAGAATGGAAATGGACTATAAACAATGGATAGTTGACTTTGTAAACCAGTCATTACTTCAGTTAAGCACCTGTGATGTAGAAAGTAAGCGCTATGAGAGAACAGAGTTTGCAGAGCACCTGGGAGAGATGAACCGCCAGTGGCAGCAGGTCCACGGAGCCCTGAACGGCAAGATACAACATTTAGAACAACTTTTGGAAAGTATTACTGAGAATGAAAACAAAATACAGATTCTGAACAACTGGATGGAGGCCCAAGAGGAGAGACTGAAAACTTTACAAAAACCTGAAAATGTGATCTCGGTACAGAAGACGCTCCTGGATTGTCAGGATATAGAAAATCAACTTGCAATGAAATCCAAAGCATTGGATGAGTTGAGACAAAATTACCTAACTTCGGAGAGTGGGACAGTGCCATTGTTGGAAGACACGGCATCCAAAATTGATGAGCTATTTCAAAAGAGAAACAATGTTATGAACCAGGTCAATGAGCTCAAGACCTCCATGCAGTCTGTTTTACAGGAGTGGAAAATTTATGATAAACTCTATGACGAAGTGAATATGATGACAATCCGATTCTGGTACTGCATGGAACACAGCAAGCCTGTGGTTTTATCATTAGAGGCCTTAAGGTGCCAGGTGCAGAACCTTCAGACTCTTCAAGACGAAGCTGAGAGCAGTGAAGGGAGTTGGAAGAAACTCCAGGAGGTGATTGGAAAACTCAAAGAGTACTGCCCCTCAGTTGCTGAAATAATTCAAGAGAAATGCCAAAATACTCACACAAGGTGGACTCAGGTAAACCAAGACATCGCAGACCAGTTGCAGAGGGCCCAGAGCCTGCTACAGCTCTGGCAGGCATGCAGCAGTGCTCACGCTGAAGCCGCAGCAAGGCTGGAGCCGCAGGAGACAAAGTGGCAGCAGCTCGCAAACATCAACACATCTGGGAACAACCTGGCAGAGGTCCTGCCCCCGGCCCTGCAGGGTGCAAAGGAGCTGCAGTGTGAGGTGCAGAAGACAAAAGAGGCCTTTCTCCAAAATTCCACTCTCCTTGATCGACTCCCACAACCTGCAGAGCCCAACACCCATGTGCTCCTGTCTAGTCAAATGCACTCCCTTCAGAGAGCTTCCTACCTGGAAAAGATGCTGCTTGTGAAAACAAATGAATTTGAGTTTGTTCTATCACAATTCAAGGATTTTGGGGACCGGTTGGAATCTTTAAAAGGTCTCATTACACATGAAGAAGAGAATTTGGATAAACTCTACCGGCAAGAAAAAGAAGGAAATCCTGACTTATTCCTGAATCATGTGCTGGCACTGACGGCCCAGTCACCTGATATCGAGCATTTGAACGAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCTATGAAGACATTACAAAACGTGAACCGGCAGTGGATCCGGGCCACGGCGACGGCGCTGGAACGCTGCAGTGAGCTTCAAGGAATTGGATTGAATGAAAAGTTTCTTCATTGCTATGAAAAGTGGGTCCAGCTTTTGCAGAAGATAGAAGAGACACTCAAGGCAAACATGGCTGACAGCCTTCCTGCTCTTCTAGAACAGCAGAAGACGTATGAGATGTTAGAAGCCGAAGTTTCTATAAACCAGACAATTGCTGATTCTTATGTCACCCAGTGCTTACAACTCCTGGACACAGCAGAAATAGAGAAGAGACCGGAATTTGTTTGGAAGTTCACGAGGCTCAAGGGGCAGTGGCAGAGCGCGGCCCAGGGTGTTCGCCAGAGGAAGAGCGACATCGATGAGCTGGTGAGGCAGTGGCGGTCCTTCACCACCTCCGAGGGGGACCTGCTCCGCTTCCTCGCCGACACCAGCCACCTGCTGTCCGCAGTGAAGAGCCAGGACTGCCACAGCCTCCACCAAACGAGAAGCCTGATCCATGAGCTGAAGAATAAAGAAATTCATTTCCAGAGGTGGCAGACTACGTATGCATTAACGTTGGAAGCTGGGGAAAAGTTACTGAACACAGCTAACCTGGAAACTAAAGAGTCAGTTAACAAGAGAATCAGTCAACTTCAGGACAACTGGAAGGACACAAAACTCCAACTTGGAGAAATGATTAAACGGTTCCAGAGCACTGCAGAGACCTGGGACCAGTGTGAAAAGAAAATCAAGGAGTTGAAAAACAGGCTGCACGTTTTAAAAGCACAAAGTAAAGACCCTCTTCCAGAACTTCACGAGGAGCTCCACAGAGAAAAAGAACTGATTAAGGAACTAGAGAAGTCTTTAGCTAACTGGACTCAGAACTTGAAAGAACTTCACACAATGAAGACCGACCTAACCCAGCACATTCTGGTGGACGACGTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCACAGACAATGGGAGGACCTCTGCTTAAGAGTGGCCATACGCAAACAGGAGATAGAAGATAGACTCAATTCATGGATTGTGTTCAACGAAAAAAACAAAGAGTTGTGTGCATGGCTGGTGCAGATGGAAAACAAAGTTCTCCAGACAGCAGATATTAGTATTGAAGAAATGATTGAAAAGCTCCAGAAGGACTGCATGGAAGAAATAAATTTGTTTAGTGAAAACAAGTTACAATTAAAGCAAATGGGCGACCGGCTGATCAAGGCCAGCAACAAGACAAGAGCAGCTGAGATCGATGACAAGCTCAACAAAATCAATGACCGTTGGCAACATCTTTTTGACGTCATTGGCTCAAGGGTGAAGAAGTTGAAGGAGACCTTTGCTTTTATTCAGCAGTTAGACAAAAACATGAGCAACCTTCGCACCTGGTTGGCTCGGATCGAGTCTGAGCTTTCTAAGCCCGTGGTTTATGATGTCTGTGACGATCAAGAGATCCAGAAGAGGCTTGCTGAGCAGCAGGACCTGCAGCGAGACATTGAGCAGCACAGCGCAGGGGTGGAGTCTGTGTTTAACATCTGTGATGTCCTCCTGCACGACTCGGATGCCTGCGCCAACGAGACCGAGTGCGACTCCATCCAGCAGACCACCAGGAGCCTGGACAGACGCTGGAGGAACATCTGTGCCATGTCCATGGAGCGGCGGATGAAAATTGAGGAGACGTGGAGGCTGTGGCAGAAGTTTCTAGATGATTACTCCCGCTTTGAGGACTGGCTCAAGGCTGCTGAGAGGACAGCGGCCTGTCCGAATTCCTCCGAGGTGTTGTACACAGTTGCCAAAGAGGAGCTGAAGAGGTTTGAGGCCTTCCAGCGGCAGATCCACGAGAGGCTGACACAGCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGCCCGCGAGAACCGCACCGACACGGCCAGCAAACTGAAGCAGATGGTGCATGAGGGCAACCAGCGATGGGACAACCTCCAGAAGCGGGTCACGGCCATCCTGCGGAGACTCAGACATTTCACCAACCAAAGGGAGGAATTTGAGGGGACCAGGGAGAGCATCCTGGTGTGGCTCACGGAGATGGACCTACAGCTGACCAACGTGGAGCACTTCTCAGAGAGCGATGCTGACGACAAGATGCGCCAGCTGAATGGTTTCCAGCAGGAGATTACATTAAATACCAACAAGATTGATCAGCTCATCGTTTTTGGGGAGCAGCTCATTCAGAAGAGCGAGCCCCTGGACGCCGTGCTGATTGAGGACGAGCTGGAGGAGCTGCACCGCTACTGCCAGGAAGTGTTCGGCAGGGTCTCCCGGTTCCACCGGAGGCTCACCTCCCACGCGCCGGGCTTGGAAGATGAAAAGGAGGCCTCTGAGAACGAGACAGACGTGGAAGACCCCAGAGAGATCCAAGACGACTCTTGGCGTAAAAGGGGAGCAAGTGAGGAGCCCTCATCCCCGCAGTCCCTTTGTCAACTGGTGCCCCCAGCGCTGGGGCCCGAGCGCTCTGGCTGCGAGACCCCTGTCAGCGTGGACTCCATCCCACTGGAGTGGGACCACACAGGCGATGTGGGGGGCTCCTCCTCTCACGAGGAAGACGAGGAGGGCCCCTACTACAGTGCACTGTCAGATATAGAAATCCTTGAAAATCCTGAGGCATATCTTAAAATGACCACAAAAACTTTGAAAGCGTCTTCTGGCAAATCCATTTCTGAAGGCCCCTCGTGGCATGTTCCTGACAGCCCTTCCTGTCCCAAGCGTCGCTACAAACAAATGGGAGGTGACAGGAATGTTCAACCCATCCCCTCTGATTCCAGCACCCCTTATAAACCAGCCTATGTAAAACTGCTGTTGTCTCCAGGGACTGAAGGTGGCAAGGAAGATCCAGGGGTTCTGACTGGCAGTGCACAGCAGGAAGATGAAGACCTGGCCGCCCTCACTGGTCAGCAGTCAGGTGCCTTTGACAGATGGGAACTGATCCAAGCACAAGAACTTCACAATAAGCTCAGAAAAAAACAAAACCTGCAGAAGCTGAACTCTGATATCAGCAACATCACCCCTTGGCTGGAAAAAACTGGAGCAGAGCTGGAGACGTTAAAGCTGGCAGAACCTCCCTCTGATATGCAGGAAATGGAACTCCAAGTGAAGAAGCTGAAGGAGATACTGAAAGCCTTTGACACCTACAAGGCCTTAGTGGTCTCCGTCAACGTGAACAGCAAAGAATTTCTGCAGAGCGAGAGCGCCGAGTCCAAAGAACTCCAAGGTAGAGTCGGCCAGCTGACCCTGCGCTGGAACACGGCCCTGGGCGCGGTGGAGAGCTGGAGAGAGGGTTTGCGGCGGTCGCTCATGCAGTGCCAGGACTTTCACCAGCTGAGTCAAAGTCTGCTGCTGTGGTTAGCGAGTGCTGAGAGCCGGCGGCAGAAGGCTCATGTCACCGACCCGGAGGCAGACCCCCAGGCTCTCCTGGCGTGTCAGGAAGAACTCGTGCAACTGGAAAAGGAGCTAGTGGAACGTCAACCTCAAGTAAATTCCTTACAAGAGATTTCCAGCACCCTGCTTATCAAGGGGCATGGAGAAGACTACATTGAGGCTGAAGAGAAGGTCCATGTTATTGAGAAGAAACTCAAACAGTTACTTGAGCAAGTGTCCCAAGACTTAGTGTCCTTGCAGCGAAGCCAGAACCCAGACTCACCTCTGCCCAGCGTGGACGAGGTAGACCACGGAGAGCCTCTAGCAGCGTCTGCGCCAGCTCCCCAAGCCAAGTTCGAAGCAGAGAAAACTACAAAAGAGAAGAACAAGACCGCCAGCAGGGTGCCTGGTCCCGCTGCCCCTGAGAGCTCCAAGCCCCAGCGCTCCTTCCTTTCTCGGGTGTTCAGGGCAGCGCTGCCCCTCCAGCTGCTCCTGCTACTGCTGCTGTTCCTGGCCTGCCTGCTGCCCTCCTCCGAAGAGGACTACAGCTGCACTCAGGCTAACAACTTTGCCAGGTCCTTCTACCCCATGCTGCGGTACACCAACGGGCCACCCCCGACATAGAGGCTCAGCCTGGCCCGCAGTGCCACGCCACCAGCCTGTTGACTTGGTGTCCACCCTGTGAGTGACTCTGAGCACTGGTCCAAGGGCCACCAGCTGTGGATACCTCCCTCTGGGCTTGACTTGGGAGAGCTCTCTCCAGACCCTGGGCAGCAGTCACTCCGGGCAGTTTGGCAAAGCTCAATTGATTGGATTTGGGATCTTTGGAAACAGCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGATTTGTCAAACCACATTATTAAAACGTAGTGAATATGGTCAGTGAACAGTAGTATTCATCACATAGTATATATATTACAGAAACAAGCAGATTCCACCTTGGAAATGGTTCAGAAACTCACACACCCTTAGCTGATTGATTGAAACAATCATATTTAAGATGTTTGTTTAGAATTAATTTTACTTCAATCAGCAGCAATCTTGAGCTACAGGTTATAAAACCAAAATGATCTGTTCAGTACTTAGGTCTGCTCTTTATACTGCTTTAAATTTTTAAAGAAATTATATTGCATGGATGTGGTTATTTGTGCATATTTTTTAACAATGCAGAATCTATGAATAATGTAAACTTTGATTTTTTAAAAACAAATTTTTGCTTGAGCTTTTTTGACTAATGTACAGTAAATGCCAAACCACGGACTTGATAGGGACATTTTTGTAAGTTAATTTTATAAGACTTTTTCACACTTAAAGTGATGCTTCAGGTTTTAATTGTTTGACCATGGGGGATTGGTGCAGAAACTTGAAGCTGTTTGTGGTATGTACAACTCAGATGTTTCTCATTAAAACAAAACAAAAAAGCCATACCTTTGTCATAATGGATTATATTTACAAAGCCATTAAATGTCATGCGTAATCCTCCATAGAGGAAAAAATATTTTAAAAATATTTGAAGGGATTTATGGGTTTTACTATTTTTGAGCTAAGATTTATATTCTACTGTTTTATAGGGGAGATGAGGGCAGCACAAGTTGGATGTGAAAGGATCATTTCACTCAGATTTTTTATCCCCAGCTCCCTCCAGAGCCAACCAACACATAGTGTTTAATGAATATTAACAGACAAAGCCATCTGGCTTTCCTACAATTCCAGCACCACCATCTATCTCCCACCCAAACAAAGAGTGTAATGATAAGTTACTGATCCAAATGGAACAGAAGAGAGAGCCCAGAAATACACCCACACACTTACGATCAGTTGATCTTCCGCCAAGGAGGCAACAATATAAGTGGGAAAAAGTCTCTTCAGCAAGTGGTGTTGGGAAAGTTGGATATCTGCATGTAAGTCAGTGAAGTTAGAACACACCCTCACAACATGCACAAAAAGAAAACGGCTTACAGACTTAAGACGTGATCCCATAAAACTCCTAGAAGAGATCAGAGGTAAAACGTTCTCTGACATAAAGGGCACCAGTGTTTTCTTACGTCAGTCTCCCAAGGCAATAGAAATAAAAATAAATAGAATCTAATCAAACTTAACCAGCCTTGGCATAGCAAAGGAAACCATTTGACAAGAAGACAACCTACAGAATGGGAGAAAGTATTTGCAAACGAAGCAACCAACAAGGGCTTCATTTCCAAAATATACAAACAGCTTATACAA EMBV3_08624 AACCGTCTGTGTCGGAGGACACCCTTCCCTGCAGTGCAGACTCGGGGCTGTGTTGTGAGA Gene GeneID:789913|AMZ1:XM_002698165:641_cdna Constitutive 0 NULL GeneID:789913 25 GENE AMZ1 NULL archaelysin family metallopeptidase 1 EMBV3_36582 TCTGCTCAGGAAGATCCCTCGCAGCCAGCAAAGGAAACCCTCTGAATCCGTGCTCCACTT Gene GeneID:613907|BHLHE41:NM_001076297:49_cdna Constitutive 0 NULL GeneID:613907 5 GENE BHLHE41 BHLHB3 basic helix-loop-helix family, member e41 EMBV3_00069 TTCAATCGTTGTTCAAGGGAAGGCCATGGGCCAAGGGGATACAAGAGGAAATTTGCGTGG Gene GeneID:281643|BCAT2:NM_001013593:38_cdna UTR3_Alt 2 NULL GeneID:281643 18 GENE BCAT2 MGC137404 branched chain aminotransferase 2, mitochondrial EMBV3_01856 AATGGACGGACAGCTCTTCTCCTTGACACCATGAGCATAACCTGGACAGTCATCGATCCT Gene GeneID:100336893|LOC100336893:XM_002690332:5_cdna Constitutive 0 NULL GeneID:100336893 9 GENE LOC100336893 NULL retinoic acid early transcript 1E-like EMBV3_19620 AGGTGGAGGAGACCCTGAAGCGACTCCAGAGCCAACCTCATGCACAACTTCATCTTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41765 GATCTTGCACATCATTTCAGGGATCCAGGCCAAGGCTCCTAACACCAGGGGAATTCAAAG Gene BVT0102_171354 + 1 EMBV3_04424 GK000001.2:73802041-73974239 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28813 GCCTAACAGTAGCCAGCTTGAACCGTGTGATTTATTTCATCCGTGACACCGTCCTCTTCG Gene GeneID:618199|PEX11A:XM_002699057:61_cdna Constitutive 0 NULL GeneID:618199 29 GENE PEX11A NULL peroxisomal biogenesis factor 11A EMBV3_27505 GAGAATCTGAGCAATAAGACTGGGCGATGCTCATACAGCTACCAAGACAGAGTGGCCAAG Gene GeneID:785256|LOC785256:XM_002690237:43_cdna Constitutive 0 NULL GeneID:785256 9 GENE LOC785256 NULL similar to trace amine associated receptor 7a EMBV3_24662 GAAGTGGTTCCAGAGTATGGTGCACATCTACCCTTGTGCTTTCTATGGGCGTGGCTTCAC Gene GeneID:521298|AWAT2:XM_002700046:4_cdna Constitutive 0 NULL GeneID:521298 X GENE AWAT2 DGAT2L4 acyl-CoA wax alcohol acyltransferase 2 EMBV3_33998 GGAAGGGAGTGGAGACTGCTGGTTCCTGCTACAGTAAAGGGGAACAGAGATGGAACAATA Gene GeneID:504961|MPDU1:NM_001075179:469_cdna Constitutive 2 NULL GeneID:504961 19 GENE MPDU1 MGC140587 mannose-P-dolichol utilization defect 1 EMBV3_13950 ATCCCGGGAACTTTGACACCTCGTCCCGGGGCAGGAGGAGAGATGAGCAGCTGTCCCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30630 CCAGAACCTCCATCATCTGATTCTTAAGCCAAGACAATTTGTAGTACATTTGGGCTCCCC Gene BVV0102_165713 - 1 EMBV3_37945 GK000006.2:95909003-96346731 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210308 1 XLOC_128818 NonCoding TCONS_00210308 XLOC_128818 NonCoding NonCoding - 6:96343900-96344094 - TSS157815 194 0.731958762886598 1 0 0.000140264792993963 0 4.77011104217052e-05 8.5609812281084e-05 0.000178146204688426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000370692309715788 0 0 0 0 0.00099998522190441 0.000617386068881834 3.02018788770118e-05 0 0 0 0 noncoding 0 0 0 0 0.326792270711591 0.161865751883399 0.0975482282838306 0.2897366844374 ATAAAAATGTCAGAGTTGGAAGGAAATTTAGGTATTTCCAGTTCATCCATTTTCACTCTGTGGTTGAGAAGCTAATCTGTTCAATTTCATCAAGCTACTTGTGGCTAGATCTAGGTCCAGAACCTCCATCATCTGATTCTTAAGCCAAGACAATTTGTAGTACATTTGGGCTCCCCCGATGGATCAGTGGTAAA TCONS_00205879 TCONS_00205880 TCONS_00205881 TCONS_00205882 TCONS_00205883 TCONS_00205884 TCONS_00205885 . 3' 2638 TCONS_00205879 TCONS_00205880 TCONS_00205881 TCONS_00205882 TCONS_00205883 TCONS_00205884 TCONS_00205885 . 3' 2831 EMBV3_03582 AGTCCCGGCAGGGCTCAGAGGGTTAATTGGTTTGCAGTGTGTCTTTGTCTATTGCATGTC Gene GeneID:513912|SRL:XM_002697949:642_cdna Constitutive 0 NULL GeneID:513912 25 GENE SRL NULL sarcalumenin EMBV3_26204 CCATCTGCAGGAACCACATTATGGATCTTTGTATGGGCACTAGAAAAAGAGAATTCTTCG Variant GeneID:518880|RBX1:NM_001046241:174_cdna 178^334 2 EMBV3_08077 GeneID:518880 5 GENE RBX1 MGC127542 ring-box 1 EMBV3_20519 ACTTGAATAAAACGCAGTTCTTCCCATTCAGGTATGGAACTCTCCACCCGAAAGCTGTCG Gene BVT0102_035935 + 0 NULL GK000003.2:20975446-21112048 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169047 TCONS_00169046 TCONS_00169052 TCONS_00169053 TCONS_00169050 TCONS_00169049 TCONS_00169051 TCONS_00169048 TCONS_00169045 1 XLOC_103262 NonCoding TCONS_00169047 XLOC_103262 NonCoding NonCoding - 3:20982319-20991570 - TSS126659 3201 4 TCONS_00169047_5 60 0.172133708216182 4 0.654378378378378 6.23792850454534e-18 2.47616076416948e-05 3.44077320393831e-05 1.95445789635478e-30 1.85004019863979e-05 4.26002744175349e-06 3.1112701999882e-05 1.63908134238214e-05 7.51657401262758e-05 1.90238687375599e-18 6.55814644114132e-13 1.83213690767185e-17 1.94544222956432e-06 1.17483278650709e-05 6.51694883314357e-24 0 0 0 0.000182506737647635 0.000277451577879368 3.15402793491449e-08 4.9566432771055e-43 0 1.04474891898142e-05 2.01653269761785e-05 2.65057091139787e-16 1.12903535613e-05 2.28988544158748e-18 3.30943988237801e-19 6.36458806524329e-20 XR_230554.1 LOC101907327 PREDICTED: Bos taurus uncharacterized LOC101907327 (LOC101907327), 0.0 973 100.00 0.168072477350828 0 noncoding 0 0 0 0 -0.355670424660518 0.0646374519172541 -0.046333195195336 0.451866114091104 GAATAGGACGTTATTTCTTGAATCGTCAGCTGACTTGCTTTCACATATTACCAAGTTGCTTCGTCCTGGCCTAAACTGATTTAGTGGTGTCTGATTTTTTGCAACCCTATGAACCATAGCCTACGAGGCTGGTTTGTCCAAGAGATTTCTCAAGCAGGAATACTGGAGTGGATTGTCATTTCTTTCTTCAGAGAATTTTTCTCACCCAGGGGTCAAGCTCGGATCTCTTTAAGTCTTCTGCACTGAAAATGAATGACCTGGACGTGAAAGAAGAGAAGAGCTATGAAAGAGGTATGAGCGTATCTTGTGGACCCAAGTGGGCTTCAGATCAAATTCCTCCTTTCAGATGCTACGCACTGACTGAGCAATTGAACAAGTTCGATAAGCTTTCCATGTCTCAGTTTTCTCATATATGAAATGAGGATGGTGATATGATAGAAGCCTGTTGAAAGGATTAAATAAGTGCACCCATGTAAAACTTGTAGACCATGCCTGGGCACATGGCACTTTGCATGTCATCATTGAGTGTAAGCTTTTACATTTTGGCACAACACTGCATAAAGTCTGGGTGTGGTTTTATTTAAGTTACTGATGGCTTGCAGTGTCTGTGGAGCCTCCAAGAGAGAGTAAAGCAATCCTGTTTGATCAGCAGTAATCGCCTGGACTGGAAGGATCTGAGTTTATCAGCTGATCTGATCAGCTCAACAAAACAGCAATAATGGTCCAACTCCTTGCTTCAAGAATGCTGAACTTAAAAAAAAATCATGGTTTTACACTGGAAAATATTCCCCTACACATGACACGAGACCCAGAATTTTTAAAAAGTGATACATATGTTTAAATTCAAAATACAAGCAATGAACTTTAGAAAATATATATGTAGTACAAAGATACACATGCCCCAAAACAGTAGTCTCTTGATCCCTTCTCATGTTCCTTTTTTCCAGGGATAACCCCTTTCACTGCATGTTTGGCTATATATCTCCTTATCTCTAAATAAATATTGACCTTGCGATTTTCCAGTTTCCCACCCCAGACGCTGCAGACTGGCCTGCAAAGGGGAAAGTGGAGTGTGTGTGTTTCCTGCTCGCCAGTCATCTACAAGGCAACAGCCAAGACTTCCACTCACCTGCAGACCCACACAGCCCACCTCACTGCTCCACACAGAACCGCAAAGGGAACTTTGCCAGAACAAATGCCACTCCAGCAGCTTTGCGATTTGGGGTGAATCGGGTCCTGGGACACTTCAGTAAAGGGTGGGAACACCAGAGTGAGACACTGTGGTCACCCCAACCCAGAGACCACCCACTCCTCTCCCTTCCAATCCCTTTCTCCCTTCTGGCTCATCCTGTGTTCCCTCCTGATCTTTGCCTTCCTCGGATCTTTTCGCCAGCCTCACACCTTTGTTTCTTGTCCTACAATGACAGCTGCGTCATTGAGTCCTTTGTAACCACTGAAAGTTCCAAATTATAAGTATCAGAGTGATGCTTCTTAGCACCTCGAAGGGAAAACTTTAACTAGCTATTCAGGTCCATCACGGGCCTCATCAGTGTTTTTCTCCCGAGCAGTAGAGGACACAAGTGTTTCCATTCGCTCACGTCGTGAGAAATCATCTCAGTGGAGCAGAGTCTCGGCAGAACGAAGGGAACCCAGCCCCCCGCTTCAGACTCCCAACGGCTCATCTCCCCTTCGTCCACGGAGCAGCCTGGCCGGGCGGCCCTGGGTCAGGGACCTGGGTCTCCTCAGACGCCGGAATATGCTACCCTCGCTCCTCTTTCGGTCTGAGCTTGGGACCAAGGCACAGGATTCCATGAGTGAAGGTTCGAATCTTGACTGAACAGCGGCTTTGCATGTCCAACGGAGACTTAAGAGTGAGAAACTCTGAATAAAATCATAATAAACTGAGACTGGGCAAATAAAAATTCGGAAGAGTAGAGAACTTGAATAAAACGCAGTTCTTCCCATTCAGGTATGGAACTCTCCACCCGAAAGCTGTCGGGATTCCCGGCTGATTAGCAACATCGCAGGCCCTCCATGTCACCATTTACTCACAGGGACATTGTTTCTAATTAATCAGAAAGGTCTCACGAGATTTGAACTCGGATCGCTGGATCCAGGGTCCTCACCATTACACCATGGAACCTCTTTGGCAGCTCCCTTCTCTCCCCTGCCAGGGAAAGGGCATCTGCTTCTTCAGCTTCCATATGCCCCATTCCTACTCCCAAAACTTGAACACAGTTGACACTCATCCCTTTGCTTTCTTTCTGCTCCTCTCCTCTGATAGGCTCAGTTCACTCTCACCTCAGAAAATGAGGTAAAATCCACTTTGGGTTTTGTGCCAGGGAAGAGCCCCCTAGCTCTCCATCATCAACCACATATTCTGCCCTGGTTAAGCAGAATGTCCCATCTTGAGGTAAAACTTCTGCAAATAAGAGTGTTATTTGCCTTTTCCTTGCTTTCACTTTTTCTCATTGCTTCAAGAGGGCAGATGGTTGTCAGGGCAGGAGGTGGGATTTCCTGGGTCCCTTAGTTTTCCCATAGTACAGATTACCCTCCAAAACCGCTGCCAGCACCTCTTATCTGTAACATGTAAAGTGTGTCAGCAGTGGAGTGGCAATGGAGGCAGGAGAACTCTCCTTTTCTTCATACATTTCTGATATGGGAGGGGTAAAGTTTTCTCACAGCAAGTGTATATTTGTTAGATTTGCAATATAAGTAAAAATAACCATTTACATCAAACACTCAGACAAACTAGCTATACTCACCTAGAAGTGAAGGGAACTTCGCTCAGTCTTGTTTGACTTTGTGACCCCATGGACTGGAGCATGCCAGGTTCCAAGAGATTCTCTAGGCAAGAATACTGGAGTGGGTGGCCATTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTTAACCTGGGTCTCTTGCATTGCAGGCAGATTCTTTACCCGCTGAGCCACTAGGGAAGACCCAAACTCACCTGGGGTGACTCAAAATCAACCACATGTCGAGGAGAACATGAGGCACAGCTCTGACACTTAGGCAGTCACAGACTCTTTGGTCAGGTCGGTCAAGTCAGTTTCTCTCCCATTAACATATCAAACCCAGAAATTGCAGTTTAAAAAAAGGCATACAAATATCAAGGTACCCAAGAGCACTGATTGTTGAATCATAGAGGATGCACATCCAAGTTGTCTTAC TCONS_00172489 TCONS_00172490 TCONS_00172491 r 5' 6875 TCONS_00172489 TCONS_00172490 TCONS_00172491 r 5' 6875 EMBV3_09795 GGCTCGAGTAGAAGAACTCATTGAAACAAAAACAAAGTCTACCTCTGAGGAAAATATGGG Gene GeneID:504211|GLMN:XM_002686253:48_cdna Constitutive 0 NULL GeneID:504211 3 GENE GLMN NULL glomulin, FKBP associated protein EMBV3_01361 CTAGGTTCAGGATTTTGGTGTTGCCGAACCGCACAGACCGGGTTCAGAGAAATAACTTCC Gene GeneID:281941|NCAM1:NM_174399:29_cdna Constitutive 0 NULL GeneID:281941 15 GENE NCAM1 NULL neural cell adhesion molecule 1 EMBV3_20286 TGCGGGGAAACCCAAGGACCCCCCTCCCCAAGTTGTATGGACTTCTTTATGTGTTTTGCT Gene GeneID:616129|HOXB2:XM_002695910:260_cdna Constitutive 0 NULL GeneID:616129 19 GENE HOXB2 NULL homeobox B2 EMBV3_19250 GGTGTTATTGAGGTGCAGGAGATCCAAGGTAAAAAGGTGGCCAGAGTTGCCAATCCCCGG Gene GeneID:516337|POLR1C:NM_001038124:288_cdna Constitutive 1 NULL GeneID:516337 23 GENE POLR1C MGC134521 polymerase (RNA) I polypeptide C, 30kDa EMBV3_30870 CACTGTGACCCCACTCCAGGATTCTCAAGGCCTGTTCCCTGATCTCCATCATTTCTTACA Gene GeneID:616339|TUT1:NM_001080322:115_cdna Constitutive 0 NULL GeneID:616339 29 GENE TUT1 RBM21 terminal uridylyl transferase 1, U6 snRNA-specific EMBV3_23542 GGGCTTGTTAGTGGCTGAACCAAAACTCAGCTCTCCCAACTCTTCACTCAGCAAGGTTTC Gene BVV0102_228820 + 1 EMBV3_36545 GK000010.2:81677906-81751516 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14625 CACTTTGTCCGAGGAACAGCAGCAAATGGTACAAGCCTTCTCCACTCAGTCTGGGATGAA Gene GeneID:613789|NXF2:XM_002699828:93_cdna Constitutive 0 NULL GeneID:613789 X GENE NXF2 NXF2B nuclear RNA export factor 2 EMBV3_16165 TGTTAGCAATACTGGAACCACCGGGCAAGACGGGAGGGAAGATGCTGTCCAGTGCCTTTG Gene GeneID:526430|NCK2:NM_001099036:95_cdna Constitutive 2 NULL GeneID:526430 11 GENE NCK2 MGC159894 NCK adaptor protein 2 EMBV3_30033 GACTTGGAAAAGACTGTGAAGCTGGGAAAGTTTGAAGGCAAAAGAAGAGGGTGGCCGAGG Gene BVV0102_058311 + 1 EMBV3_24905 GK000007.2:5796249-5800190 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215282 TCONS_00211604 TCONS_00215281 2 XLOC_130883 XLOC_129930 Coding TCONS_00211604 XLOC_129930 NonCoding NonCoding - 7:5796355-5799152 - TSS158964 2453 3 TCONS_00211604_3 58 0.379127598858541 2 0.123390557939914 3.62513271407908e-40 0 3.90664833676423e-126 7.59044066972736e-83 4.1695733877093e-34 0 1.62539726479233e-120 0 7.3878653159523e-05 6.54390693944518e-05 1.97788761870331e-262 1.72872262975685e-195 6.61725869950223e-09 6.77569207729451e-05 4.99567966750303e-05 0.000689092481647833 2.20625927512144e-05 0.000275775100814098 3.11257782105277e-05 0 0 3.33940575698648e-05 0.000370453321557238 4.95627696482065e-79 2.6703062352413e-120 3.88201870667385e-06 6.25564695901015e-05 7.04814822758932e-05 2.84359598512057e-05 7.35292871746086e-05 XM_005208521.1 OCEL1 PREDICTED: Bos taurus occludin/ELL domain containing 1 (OCEL1), 5e-130 470 100.00 0.10558499796168 0 noncoding 0 0 0 0 -0.0661764302640769 0.609901806356166 0.0278502917154006 0.675020834323345 GCGCAGCCCAGGATTGGCTCGCGTTAACCCCGGCGCGGCCCGCAATCTCTCCCGCAGGGCGAGGCGGAGTCCAGGGACAGCACCCCCGAGAAGACCGTTGGGATCTCCGGTCCGGTGGCGGCCCGCACGAACCACTCCTGCCTGGGGTCACCTGTCCCAGTGTTTGGGGCTCCGATTCTAGGTCCGCTCCCGAAGTCCGTGTGGTGCATTAACTACAGGCTGGAGTCCACTGTCTGGGTCGCTCCGCTTGCCAGGGGAGGGGCCTCGGTATATAGGGCGGGGCTGGCGGTGAGGGGGCGGGCCGGGGGAACCCGGAAGCGGACCCACACCCTGGCGGTGAGACTGACGGAGAAAGCTAGCTGCTGTGTATTTAGGGCCGGTAACTCACCCTTTCTGACCCTCAGTTTATTTGGAGAACTTTCGGCAGAGAATGAGATGGTTAGACAGCATCACCGACTCAATGGACAGAAGTCTGAGGAAACTCCGGGAGACAGTGGAGCCTGGCGTGGTGCAATCCATGGGGTCGCAAAGAGACCGACACGACTTATCGACTGAACAGCAGCACCGACTTATCTATTTACTTGAGTGAGTGAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCCACCAGGTTCCTCCATCCATGGAATTTTCTAGGCAAGAGTACTGGAGTGGGTTACCATTTCCTTCTCCAGCGGATCTTCCCGACCTGGGGATCGAACCCGTGTCTCCCGCATTGCGGGCAGACGCTTTACCGTCTGAGCCACCAGGGAATCGCATCTATTTACTTAGCGGTTATATTTTTAAAATAGTTCTTTAAATAAGCACTGGAGGCATGTTTAGAGAATTCACATAGAAAAGAAGCGTAGCGCAGAGTGAATTTCTTACCCACCCTTATTCCCAGAGGCCACGGTTAATTGTATCTCCTTTCGGAGAGATTCGAAGTCAATGACAAATCTTCCTTACTACGGACAATACTATAGAAAAAAGATTCAAGGGCACATTTCTTTGGCCAATTGTGCAGGCTTATGTAGGATGAATTCCTAGAAGTGAAACTTCCCAGAATCCACGGGGGAAAGACCTGTGTATTTTAATTTGGAGAGAGATTGTCAAACAGATTGAACTGACTTGGAAAAGACTGTGAAGCTGGGAAAGTTTGAAGGCAAAAGAAGAGGGTGGCCGAGGATGAGATGGTTACATAGCATCACCGACATAACTTTGAACAAACTCTGGTAGATCGTGGAGGACAGAGGAGCCTGGCGTGCTGAAGTCCATAGGGTCACAAAGAGCCGAACACAACTTAGCGACTGAACAGCATCAATTGTTAAGTTGTTTTTCAGTGAGCTTCTGCCAATAATGCTCTAATCAGCTGGTTTTCCCACAACCTTTGCAACCTCAATGGCATCACAGTTTCCTGTACATGTACTTTCAAAGTTTTAAATCTTGCCTAATCTGTTGCATTGACTAGCACCTCCAGACAATATTAAATCATTGGAGGAGATGGGTGGACTGTGAGTATCCCTCCACTCCAGCTCAGTTTAGTTTCTTCACTTTGACGGTAAAACTTCTAGTATTTGCCCATTAAACTCAACACTGCCTTTGGCTTGAGATTTTTCCGTTCAATGAGGAAATGCTCGTTATTTTTAATTGAGACTTTGTGTAATGGATGCTGTGAATAGTACCATTTCACTCTATGATTTTGCTTCCTGATGCATTAATACGGCTATTAACATGCTTCCTAATACTGAACCATCTCTGAGTCACAAGCAGGAGCCTCCTTCTTATGGTCTACTTTTAAAGAGTTGCCACTAGAGCTTTCATAAAGCTTTAAAAACTGCCACCAGAATTTTAAAAGGTATTAGTGGTGGTTTTACACCTATGCTGATGCAGTGGGGGTGGGGCCCACACGGACAACTCCATGCGTGTTCCACAGGCACCTTCTGTCCACCCTTCCTTTCCAAGCTTCTTCAGTCACTCCTCTCACAGACTTTGCTCTTGACATCTGGAGTGGGGATAAGCAGAACCCAGGACCCATAATTCCTCTGGACTCATACTCCATGATCCCTTCCAGGGTCCCAACTCCAACGCCCACCCAAACTATGACCTGGGCAGGCAGGGTCGCCACTGATTTTCTTGTGTTTGCTGAGTGACTGTGTGAAGCATCTGCAGTGTCCTGAGACTTTCGGCTGTGGCTGGGCTAAGCCTTGTCTCTAAATTACCACTTTCAATCCCAAGGAAAGCCCAGTACTGACACCCTGAGAGGGTAATAGGCAGGAAGGCTAGGGGTCCCCAGATGGAGGAAATAGGTTGCAAGTGTCAGACATTTTTTTTTTCTCTCTCTTAAGTGGCAGGAGGAAACAAACTACAAGTGTCAGACATTTTCCCCTTCTCTATGCAAAATTAAAAGGTTTCTTTAAAAATTTTGTGTTGCCAT TCONS_00215281 TCONS_00215281 r 5' 0 TCONS_00215281 TCONS_00215281 r 5' 0 EMBV3_10269 GACTAACATGTATGAAGGTGTAGGACGAATCAGAAAAAATCCTATCTGGAGCGGAGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40613 GCAGTAAATGTCGCAGCCAGCCTCAGCATGTTGCAGTCATCCTCAACCAAGAAATTCGAG Gene GeneID:517422|REV3L:XM_002690110:112_cdna UTR3_Alt 2 NULL GeneID:517422 9 GENE REV3L NULL REV3-like, catalytic subunit of DNA polymerase zeta (yeast) EMBV3_12153 ATCCTCACTGAAGCACCACTTGGAAACAAAACTAAGGCCTGTGGGCAGAAGACTGAAGGG Gene GeneID:508417|LYRM1:XM_002697988:63_cdna Constitutive 0 NULL GeneID:508417 25 GENE LYRM1 NULL LYR motif containing 1 EMBV3_31115 TCCGAGAAGTTAGCATTTCAGGATCAAAAGGCACTTCCGGAGGCAGGGCCATGCTCACAT Variant GeneID:282010|PSEN2:NM_174440:5_cdna 146^246 1 EMBV3_38706 GeneID:282010 16 GENE PSEN2 MGC137335 presenilin 2 (Alzheimer disease 4) EMBV3_13283 AAAGATGGCAATGTGCTGCTCCATGAGATGGCTGTTGTGGATTCTGTTTTGGCAGTTAGG Variant GeneID:538090|CCT6B:NM_001034642:277_cdna 251^559 3 EMBV3_05898 GeneID:538090 19 GENE CCT6B MGC127900 MGC140065 chaperonin containing TCP1, subunit 6B (zeta 2) EMBV3_18843 CAGCAATACCATTGACCTGCCGATGTCCCCCCGCACTTTAGATTCATTGATGCAGTTTGG Gene GeneID:508541|STAT3:NM_001012671:91_cdna UTR3_Alt 2 NULL GeneID:508541 19 GENE STAT3 MGC128731 signal transducer and activator of transcription 3 (acute-phase response factor) EMBV3_11703 TCCCCCTAGGACAGGCCCCGTTGCCAAATGCTTGCGGAAAATCGTGGATTTACAGACATA Gene BVT0102_407143 + 0 NULL GK000007.2:43978410-44009257 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220691 1 XLOC_134008 Coding TCONS_00220691 XLOC_134008 Coding Coding - 7:43984042-43984639 - TSS164689 597 1 TCONS_00220691_1 36 1 0 0 0 0 0 0 0 0.000166061820833857 0 1.32163125721056e-05 0.000296353682672201 2.30068761168476e-05 0.000263534573395911 0.000413329055398038 0.000795818119371807 0.000115053426165049 0 0 0 0 0 0 4.97197666428576e-05 0 0 0 0 0 3.21781024135097e-05 5.69217852910428e-05 0.000342405490628706 0 coding 0 0 0 0 0.168035367295471 0.312159954060518 0.00327297909207434 0.946242455144728 ACACAACGCCGGTCGCGGGGAGACATTGTGTTGCAGATACTGAAGAAACCCCTGTCCAGGGACGCCGTGGTGATACTGCACGTGGTGGAGCGGGATCTTTTCAACCAGATCGCGCGCGAGGTGACCCGACTAAGTCAGGAGGGTGCGGACCTACGAGGCGAGCGCCGGGCAACCGGGACTGCTGAGATCGGCTCCACCCTCCGGTCGCTCCTGTCCTCGAGAGTTACGCTTCGTGCCCACACCACCTCCTTCCTGACGCGTGGCCGGCAGGTGGCCCGAGCGCTGCCAGCGCTAGTCCGAAGGAGTGGGCTCCTCTTGGGATCCCCCTAGGACAGGCCCCGTTGCCAAATGCTTGCGGAAAATCGTGGATTTACAGACATAGCTAGCTTATCATCCAGGCTGTAGCTTTGGTGTGTTGCTGAAGAAATGAAAGTGTTTCCAGAGTAAATACCAGGAAAGGAAGAAACATTGGAAAATCAGGCAAAAATGTCATGGACTCGGGAAAAGTTCCAAGCAAACGTGAGGTTAGAACACCGGCACCTGGACCAACCTTATACCTCACCCCCCGATGAAGATGGAAATAAAGGGAAAATCTGA TCONS_00216742 . 5' 5420 TCONS_00216742 . 5' 5420 EMBV3_26681 CTGGTCAGGCTCTGACTCCCTGGTCAAGCTTTGACTCCTGTGTTGACCCATACAAACATA Gene BVT0102_215352 + 0 NULL GK000028.2:9026351-9033571 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00694 GGGACAAGAGACAAAGTAAACGCACCGTTGTTCCCAAAACTCATGGCTTTACCCTCTGGG Gene BVT0101_025336 + 0 NULL GK000015.2:81826971-81828677 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066308 1 XLOC_041022 Coding TCONS_00066308 XLOC_041022 Coding Coding - 15:81827590-81828138 - TSS50051 548 1 TCONS_00066308_3 83 1 0 0 0.000898491352121434 0 0.000257609820673082 0 6.52747429330302e-06 0 0 0 0 0 0 5.23591197113027e-06 0.000412029062721046 0.000608798237926898 0 0 0 0 0 0 0 0 0 0 0.00309846881343562 1.06918785703494e-05 0 0 0 0 coding 0 0 0 0 0.302771123263775 0.542052124750962 -0.0256764653573983 0.759999896493359 ACCACGGTCGAGCTCTCCTCTGTCATCCTCACCGTGACTCTATTTCAGAATGACTGACGATATGTGTCGTGCATGGAGACATTAGGGCAGAATGTTGAAACTTGAACATTTCTCTGACAGTCTGACCTGTGGTTACACCAGTAGCTTTGATCCTGGGACAAGAGACAAAGTAAACGCACCGTTGTTCCCAAAACTCATGGCTTTACCCTCTGGGTGATGGCTGTTCCCACACTCTCTAGCAACATAAATTCAACTAAATTCAATAAATACGCATTGAGCTCCGACACAGTGGTAGGATTTGAGGAAACTAGCAAGCAAGATGGAAACAGCTCCAAGCTTCCAGGAGCATGTAATCAAACAGATGATTCAGATAAATACATTGACAGTAAAACAACCCCCCCCCCAAAAAAAAACACCCAGTGTTATAATGCAATGCTGGAAGTAGAACTTCAGCCACTGCCAGGATGAATAGGAAATAGAAACTAAGTGACTCTTTAGTTACCCTCTCCCCTGAGACCAGGAGAAAGGTTCAGGAGACCACCCCTCCC TCONS_00060286 TCONS_00060287 . 5' 540 TCONS_00060286 TCONS_00060287 . 5' 540 EMBV3_30117 ATAGATTCTAACCCCCAGGGGCATCCATTCAGCCGTTATAATCATACCCAGATGAAAGCA Gene GeneID:539369|NRP1:XM_002692084:266_cdna UTR3_Alt 2 NULL GeneID:539369 13 GENE NRP1 NULL neuropilin 1 EMBV3_00163 ATGACCAGGTGGGCTCTGCTCACGCTGATGGTCCTGACATTGGGCAGGACCCTGCTTGTC Gene GeneID:751828|UCN2:NM_001076530:322_cdna Constitutive 0 NULL GeneID:751828 22 GENE UCN2 NULL urocortin 2 EMBV3_33043 TCCAGGGCTGTAGGATGGTGGTCTCGGCAGAAAAAGAGTTCACAGAATATGCCCGGAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27175 GTTGGTGGCAGCCATTTCTCATCTAACCCTAATTGAGACAGGCGTAGGCGCTGTGCTTTT Gene GeneID:379035|TERC:NR_001576:5_cdna Constitutive 0 NULL GeneID:379035 1 GENE TERC TR telomerase RNA component EMBV3_26273 GATATCTTACAGGATCTAAAGTTGGAGCCTGTTTGGCGAGGTTTCCATCAGTGCAAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15784 AGAGCAGCGAGCTGGGGTCAGAGTGTGGAAAGGCGGTGGTCGCTGAACTGGCTCTGGGAA Gene GeneID:524369|LCN10:XM_002691718:102_cdna Constitutive 0 NULL GeneID:524369 11 GENE LCN10 NULL lipocalin 10 EMBV3_39530 GGCTCAGACCCAAGGTCTATGGCTCAGTCTCCTCATCTGAACTGCATGAACAGTGTACTT Gene BVV0102_099327 + 1 EMBV3_23475 GK000016.2:50573369-50596016 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27510 GATGATGGTGTAGACACACTTAGAAAGCTGCTCTCTTCCCCTGTGAACATTCGTGTTTCC Gene GeneID:535376|TGFBR2:NM_001159566:164_cdna Constitutive 2 NULL GeneID:535376 22 GENE TGFBR2 NULL transforming growth factor, beta receptor II (70/80kDa) EMBV3_24309 GCTGACTCTTTACCTCCCATTGACAGAGGAGAATCCAACCAGGTGCCTCATCTCCAGGAT Gene GeneID:527819|KRT4:NM_001098385:24_cdna Constitutive 0 NULL GeneID:527819 5 GENE KRT4 NULL keratin 4 EMBV3_22504 ACAGAAGTACCTGACCAGAGTGGTGAAGCTGTTTGGGCCCCTCACCAGGAACTACTACAT Gene GeneID:281111|CYBA:NM_174034:26_cdna Constitutive 0 NULL GeneID:281111 18 GENE CYBA NULL cytochrome b-245, alpha polypeptide EMBV3_23315 TAACCCTGGCAGTACTGAGGAGTTACAGGCCTAGTATTTTGTAAGATGCCCCTCAACTGG Gene BVV0101_064992 + 0 NULL GK000009.2:91096761-91104611 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242583 1 XLOC_149246 NonCoding TCONS_00242583 XLOC_149246 NonCoding NonCoding - 9:91099639-91101552 - TSS182261 1913 4 TCONS_00242583_1 56 0.47151071615264 1 0 0 0 0 0 0 0 0 3.09185940326157e-06 2.47468568332701e-05 0 0 0 0 0 0 0.000207095417760043 0 0 7.49704731908386e-06 0 0 2.7153597844027e-05 3.83650567965073e-05 0.000280432841945636 0 0 0 0 0 0 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 6e-26 123 85.59 0.0564558285415578 NR_034143.1 CASC14 Homo sapiens cancer susceptibility candidate 14 (non-protein coding) (CASC14), non-coding RNA. 4e-22 111 70.67 0.148980658651333 0 noncoding CTGAGTATTATGTCAGTGTAAATGTCCAGTAAATCTACCTCCAAAATACCCTCTTAAAAAACGTATCACTTTACAGTGGAAAAATCTAACAGACACTACCTCAGTCAGACGATGATGTTCAACATCAACAATAAGTCATGTTGATGATGGTATGTACCTTTGATATGGTGTGATATGAATGGCACTTCTGTGGTCTTTCCTCCAAAATCTAATAACACCTGTCTATTCATGGGAAAACGATCAGAAAAATTCCAGTTGAGGGACATCTTACAAAATACTAGGCCTGTAACTCCTCAGTACTGCCAGGGTTATCAAAAACAAGAGAAATTTGAGAAAACATCATAGCTAAGAGGGTAACATGATGACTAAATGTAATACCATATCTTGAACAAAATCCTGGAACAGGAAAAAAAAAAAAATTATGAAAAGCAAAGAAGGGCAGGGAAACCTGGCATGCTGCAGTCCATGGTGTCTCAGAGAGTCGGACATGACTGAGCAACCGAACAACAGCAAAGGAATCTGAATAAAGTATGGACTTAATAATGCATTGATATTGGTTCACTGGAGAAGGAAATGGCAACCTACTCCAATAGTCTTGCCTGAAAAAAATCCCATGGACAGAGGAGTGGTGGGTTACAGTCTCTGGGGTTGCAAAGAATTGGACGGGACTTTGTGACTGAACATCCATGTATCGGTTCATTTATTGTGACAAATGTTTCATGGCTGTGACATGTATGGATCCTATCTGTACTATCTTTTCACTTTTTCTGTAAATCTAAAACTATTCTAAAATAAAAAGTTTAATAAAAAATTTTATGAACACACAACTACCTTTTATTCTCTTACTTTCGTGATAAACTTATTTTAAAAATCATACTACCTTAATAGTAAAAAGCATGCTTTCTATTCCATGGCAGTGTCAATGTTTTCTACTGGCTATCTTTTTTAACTTGGGTTTTAGCTCTGACTCCTACATATATACTTGGCAGATTAACTGAAAAATTCTTCCTATGCTTGGGAATGTTTATTTCCTGTGGAATTTAAATTTTCAAATGATTTCTCTTAAACTTCGATTTAAACCTACAATATTATACACCCACTCACACATCTGCATATACACATCTAAATATATCTGTGTGTGTGTCATTGAAAGAAACATTTCTTGTTTGTAGATTGAGTATGATGTTGGTGAACTGAGAACAGTGATTTTGAATCACATTATTGAACAAAGCAAAGACATATTCATATATTCTTCTGTCTTAAAATGAGCTTGATCGTATTTTTTGAATGAATAATTCAATCAGATTTTTAAAGTACAGTTTCAAAAAAATCTTGGCAAGTGCATTGAAGGCACTTAATGCATTCATTCTTGAAATGGGAATTACTGAGCTAGAGAACTTTGATATAATAATATGTAACACTTCATTCTATGTTTAATTCATTCTCATGGCAATCCTGTAAATTTTTATATTCTTCATTTGAAGAGAAAGAAACAGGTTCAGAGAGGATAAATGATTTGCCCAAGGTCACATGAGACAGAAGTATAACTGGAAGACAAATGTATAACTAAAGACTGGTATTTGGAAAGAAAATGTATCCCTCTGTGGATTGTTGTGTGTTCCAAGGATACTACTAAGAGTGCTGCAAGGAAGATCTGAAACAAGTTTTTGATATCAGTTTCACTGGTAAATATTTGCAGTTGTAATAACTAAACTTTTTATGGATTGTTTTCTCAGAAGAACAAACATTTTATATTGGTCAGAGATTAAAAACAAAAAACTGAAAAGGGCATACAAAGTGTTTGCAAGTTATATTTTGAAAACTAAGGTCATAAAGTGTCAGTATAAATACAGGTAAAAAAACAATTCTAGAAATATCTTTCCCACTTTTCAAAATAATTTGCCATCTAATGC TCONS_00238038 TCONS_00238039 . 5' 2811 TCONS_00238038 TCONS_00238039 . 5' 2811 EMBV3_06989 AAACTCTGTGAGGTGGAAGAAGGAGATAAGACAATGGAGGCAATGAATGGTGGAAAACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41306 GTGGTAGGCTTTGAATTTGATCCTCGCCCAAGTTGGAATCCTGTTTGCTTAAGACGTTGG Gene BVT0102_127816 + 0 NULL GK000018.2:10854544-10876309 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082250 1 XLOC_050948 Coding TCONS_00082250 XLOC_050948 Coding Coding KLHL36 18:10843392-10859111 j TSS62070 5898 1 TCONS_00082250_5 334 0.0100033909799932 6 0.625143147983204 0.00182245564538582 0.000753907093335359 0.00119548822124376 0.00110083010486637 0.0013357258214462 0.00085198100779304 0.00126880362053219 0.00113626989533871 0.000893741605583643 0.000367757426610988 1.07905114130918e-05 0.000110578802986381 0.000195609239792065 0.000936687065186302 0.000226317082111422 0.00111469624669516 0.00127231369299301 0.00210022924102851 0.000810636584098591 0.00114965732871838 0.000202530701806515 0.000648254415806573 0.000776906822756817 0.00115931604965631 0.00088759049854008 0.00114734232515249 0.000941867619888578 0.00013114857850656 0.000177334229734826 7.14127134666576e-05 NM_001077118.1 KLHL36 Bos taurus kelch-like 36 (Drosophila) (KLHL36), mRNA. 0.0 3454 99.90 0.325534079348932 XM_005256149.1 KLHL36 PREDICTED: Homo sapiens kelch-like family member 36 (KLHL36), 0.0 2762 92.78 0.316887080366226 TCONS_00082250_5 sp|Q3B7M1|KLH36_BOVIN KLH36_BOVIN Kelch-like protein 36; 0.0 704 100.00 0.997005988023952 6 coding 0 0 0 0 0.033013799041568 0.798373060001847 0.0235042024254961 0.728904198854045 CCGGGCGGCTGTTGTGCCGGCTGTTCCGCCTAGCGGTGCCGTGTCCGAGGAAGCCACGGCGGTGTCCGCCGAGAGCCGGGACCGGGCTGCGATCTCGTTTATGATGGAGGGAAGCCGGCAGACGCGAGTGTCTCGGCCGTACAAGATCAGCGAGTCCTCAAAGGTGTACCGCTGGGCCGAGCACTCGGGCACAGTGCTGCAGCGGCTGAATGAGCAGCGCCTGCGCGGCCTCTTCTGCGACGTGGTCCTGGTGGCCGATGAGCAGCGCCTGCCGGCCCACCGCAACCTGCTGGCCGTGTGCAGCGACTACTTCAACTCCATGTTCACCCTGGGCATGCGCGAGGCCTTCCAGAAGGAGGTGGAGCTGATCGGCGCCTCCTACATCGGGCTCAAGGCCGTGGTGGACTTCCTGTACGGCGGGGAGCTGGTGCTGGACGGCGGCAACATCGACTACGTGCTGGAGACGGCCCACCTGCTGCAGATCTGGACTGCGGTGGACTTCTGCTGCGAGTACCTGGAGCAGGAGGTGAGCGAGGACAACTACCTGTACCTGCAGGAGCTGGCCTCCATCTACAGCCTCAAGCGGCTGGACGCCTTCATCGACAGCTTCATCCTCAGCCGCTTCGGCACGCTGTCCTTCACGCCCGCCTTCCTGCAGAACATCTCCATGCAGAAGCTGTGCGCCTACCTGGGCAGCAGCGAGGTGCAGCGGGAGTGTGAGCACGACCTGCTGCAGCCGCCCTGCAGTGGCTGACGCAGCAGCCTGAGCGCGAGGCCCATGCCTATCAGGTGCTGGAGAACATCCACTTCCCGCTCATCCCCAAGAACGACCTGCTGCACCGCGTCAAGCCCGCCGTGTGCTCGCTGCTGCCGCGCGAGGCCAACTGCGAGGGCTTCATCGAGGAGGCCGTGCGCTACCACAACAGCCTGGCAGCCCAGCCCGTCATGCAGACCAAGCGCACGGCCCTCCGCACCACCCAGGAGTGCCTGCTCTTTGTGGGCGGCGAGGTCTCCGAGCGGTGTCTGGAGCTCAGTGACGACACCTGCTACCTGGACGCCCAGAGTGAGCAGTGGGTCAAGGAGACGCCCCTGCCGGCCCGGCGGAGCCACCACTGCGTCGCCGTGCTGGGGGGGTTCATCTTCATCGCCGGCGGCAGCTTCTCACGGGACAACGGAGGGGATGCGGCCTCCAATCTCCTTTATAGGTATGACCCCCGCTGTAAACAGTGGATCAAGGTGGCCTCCATGAACCAGCGCCGTGTGGATTTCTACCTGGCCTCCATCGAGGACATGCTGGTGGCCGTCGGTGGCCGAAATGAGAACGGAGCACTCTCCTCGGTAGAGACCTACAGCCCAAAGACCGACTCCTGGTCCTATGTAGCCGGCCTGCCAAGGTTCACCTATGGCCACGCGGGCACCATCTACAAGGACTTTGTGTACATCTCGGGGGGCCACGACTACCAGATCGGCCCCTACCGCAAGAACCTGCTGTGCTACGACCACCGGACGGACGTGTGGGAGGAGCGGCGGCCCATGAGCACTGCGCGCGGCTGGCACAGCATGTGCAGCCTGGGGGACAGCATCTACTCCATCGGCGGCAGCGACGACAGCCTGGAGTCCATGGAGCGCTTCGACGTGCTAGGCGTGGAGGCCTACAGCCCGCAGTGCAACCAGTGGACGCGCGTGGCGCCCCTGCTGCACGCCAACAGCGAGTCGGGCGTGGCCGTGTGGGAGGGCCGCATCTACATCCTGGGCGGCTACAGCTGGGAGAACACGGCCTTCTCCAAGACCGTGCAGGTCTACGACCGCGACAAGGACAAGTGGAGTGAGGGCACCGAGCTGCCCAAGGCCATCGCTGGCGTGTCGGCCTGCGTGTGCGCCCTGAAGCCGCGGCTGGAGGACAAGAAGAAGAAGGGCAAAGGCAAGAGGCCCCAGGACCACGGCCAGTGACCCCTGGCATGCCGACAGACCAGCAGCCACCGGGAGAACCCTGGCACCATTATGAAAGAAGGGAGCAGGTGGAACGTGCCGTTGTGTTCTATGACCCCTGCTCTGAGACACCCCAGGAGGCTCCCACACGAGGGAGGGCCCAGGGATTCCGACCAGAGGAGGCTGTCGGAGCATCTCCCCAACTCCGGCACCAGATCCTATCCCGCCCGGCCGTCGCCAGGTAGCCCTGTGCTGGGGGCACACTCTTTAACAAGTCTCGAGCTGCTTCCCACCTCCTAAAGGACGGGAGAGATCCTGGCCAGGCCTCCTCCCAGGGGTCGAGGTCTCCTAGTCTGCATGAGTTGTGATGGTGGGTTCTGCACCTCCTCCTGAAATGCGTGACCACCCCCGCTGGTCCCACAGTTACCAGAACTGACAGCAGTAGCATGTGCCCTTTAAGGAGCGTTCGAGACTCCTGCCCAAGCCACCTGTCACACCAGGACGATGGGCGTGGAGCAGGTTTTAATCACCAGCCAGCAGAGGCATTAGTGATCTGTGCCGTGGCAGAGATCTTACTGCAGAGATGACAAGGCCTCGTGATTATCGTTAATGTTGGCATTAGAATAAGAAGCTCAGTGAACTTCTTTCTCCTTTTCCTTTTTTCCTGACTCTTTATGGCACTTCCCTCCCCTTCTCTTGAAGGTTCACTGTGGTTTTGGTTGGCCTGTTTCCATAGTGACCAGGAGAGCTGAGAGCCAGCTGGGAGTTGAAAACTTCGTACCCAAACGAGCACTGCCTCTCATGAGATGGGTGACCTGTCTGCATGTTTAGCCTATGGAAGTTGCTAAAGGCTTACAGACCCTTGAGAGGTTCTGCAAAGCATACAAATAATCAAAGCAAAAAACTGTCCACCTTCTTGGATCTCCTTAATACAACATTTCAAAGTGTATTAAAGGCTCTGAGAAGTCCTGTGTCACCTGTTAACTCTCCATCAACCCTTCACCTCCAAACTGCATTGAAGCTGCAATCCTTCTTTCATCTCAAACTTAATCCAGCCCTCCCCGGAATCCATGTTACAGCACTCCTGCCAACTGTGGGAGGGCTTGCCTTCCTCCTGTTCCAAGGCACGTTTCATTGTTCCCTGAGAGGCACATAACCTGTGGTCTGTTCTCCCCAGCTTAGCCCAGGTCATGAGCAAAGAGGGGGTCATTCAACCAGAATCCAGGGCAGATTGGGCTGAGCACAGAGAAAGACCAGGCTTGCTGTGAGGAGCAGGAAGGCTTTGACCTCGGGAGGACGACAGCTGTGAGTTTTTAGCCTAAGCTAGCTGTTGTGCTTTTGACAAGAAGGGTGTGCTGCTGGCTTCTATTCAGATTTTCTCGTGCCTTGATGTTTCCCTTGCCGTTATGCTATGAAGGATGTTTATGACCTATGCACCTTCGAATCTGATATGATTGAGGCGTGAGTGTTCTTTTAAAGGTAGGGTCGATGAGGAAAATTTCTTCTTGTAGACCCACTTCAAATAGCTAGTGGTGGCTCCACTGTTCTAAGAAAGGTTTTTCCAAGCTCTTTGGGGTCCATGGAGAGGAGCTTTGTGACCCAGGGGCAGTGCCTGCCTGGGTGCGGGAGAGTGCAGTGGTGGGACCATGGCAGGTTCCTGCTGTCTGCGCTTTTAAGGTGGAAATCAGTGTGCTGTGCAATCCAACTAAGACTAGAGGAAAACTGTCTGTAACCCAGGTGGGCAGAACTTTGGGGCACCCTTAGCAGGCGGCCCTTTGAACTGCAGAATCACAATAATGTGATTTCCAGCCGCAGTGACAAAGGCTTGGGGTCTCCTGGCCACCACGTTGAGACAGAAACGGCAACTTTCCCCATCGTGTTGTCAGTGCTCCCAGCTGTTCGCCTTGAACTTTGACAACACCTTGATTGTCTTATTTTGATCTTTCAGAATGATGGGCTTTTATTCAGGTTCAGGGTTTTTGTTTTTTTTTTCTTTTTAAAGAACTAGAGTTTTAACTTCATATGAGTGGTAGGCTTTGAATTTGATCCTCGCCCAAGTTGGAATCCTGTTTGCTTAAGACGTTAGTGTAATGACAGAAAGAAAGCAGAGTAGTAAAGCTGAAGAATCCTTGTTACTTACAGTGGTCTGTCTGCTGTTTAAAATATACAGATTATCTTCGCACCTTGCTTGTGTGTATGGCTCAATCTGTATTTCTAACATCCTGCCGCTTTTAGAAATCTAGACTGCCAGGTGGTACGTCTACGTCTTTCTAGGTCTTAATCTGAGCAGAAAACCTCATGTGTGTATTTCTATTCTGAATGCCCTTCCCTTTGCCCCTTAAATCATAAGTTGGCCACATGGTGACTTAGTGGGAACTGCAGAAGTCAACCCTAAAGGGGGTTCAGTGTTGGATGGCAACCCAGATGCCCAAGGGAAGTGGCGTCCCTTGCAGGTCTAGGATCCCACTCTTGAGTTCAGGTGAATTAAGGGCCTGACCCCTAAGCCAGCAGGGACCTCTGGGTGACAGGCAGCCATGTAGGAAGTGAAGGACTCCCCCCACCCCTTGTAGACTTAGCAGCCGCCTCCTCCTCTTACCCTTTCCTCCATGGCATGCGCCTCGGCCAGCATCTCACTGAGCTTCTGGCTCTCAGGTCTTCTGGTTAGAATCTGAGACCCCTGTTCCCAAACCTGAATGGGCAGTTCCAGCCATGTGGCATGGACATCCTTGCTGTCTCCATGGATTCTGAGCATCTTCAGAGGGGAAGGGGCCATGTCCCTGACCTCTAGCATAAACCTCTGAAATGTAGGGCCGCTCTCCAGGTGCTTGGAGAGCCCATCCCCTGTGTCCGCCAAGCCTGGCAGTTTTTAAAGTTTTTTGAAATGTTTTGATACTTTTTGATACCATTTGCTAATAACCATTTTGTAGTTGCCTGACGGGGTTTTCATTTTCCATCTCCCCACCACCACCCCTCCCGAGGTCAGCTCCAGGGTCTTGTCCTAGCGACCTCTCATGGCCATGATGCTCTGCCATGGCTGCGATCTGATCCATGCTTTTGAGTTGTATGATGTCACACATGGCCCAGGAGTGTGACTGTCTTGGTCCTCCAGCTGAGCAAAAGGGCAGTGGTGTGTGATGAGGACGCGCCAACACCCTGAGACGTTGGAACATTTCTTCCAAAGCTCCTACCGCAGCAGAGTGTGCAGAGTTGAAAAGATCCCTGAGGGCCGATCCATCTGTCACCTTTCCAGTATGGGTCATTTTTCAGCCCAGGGCCTGGCTGGGTCTCGTCACTCTGGTTTGTCCACCCTTTCTTTTATAAAGACACATTAACTTGAAATCCAACAAAAGCTGTAAGCTAAACCATCCTGCACTTTACAGAGTTTTGGAGATCGCTCATCTTTTTTTTTTTTTTTTTTTTCCCTTTTTACACGGGTAGAATTTGTGGCTTTGCAGGGTGTTCGGTTTGGTGGTCTCAAGAAATTGTATTTTGGTTGCCTTAGAAGAATTAATGAATGTACAAATTTGGGGGAGGGGGGCCAGAGGAGAAACCTTTCTGTGTCAGTTTTCTTTGAGAAAAGGAACTCTACTTTTCCAAGTTACTTGAGCTGTCTTTACAGGTTTGCTTGTGATAGAAGGAAAATGTCCTTTGGATCAACTGAAATCCATCATTACCTCCAGCTCCCTTGCAGAATTAGATCTTTGATGATTAAGTGTTGATAATTCACTGGGTATGTTCTGGCTGCTAATGTTACTGAAGCTGGTTATCACGTGTGTGCTATTTTTTTCATTTGTTGCTTTTGTATTGTAACTGTATGACACCCAAAGCTTTTCTGTTTCTTATCTCTTCTTAATTTCCTGCATGTTGAAGTTTTTTTCCCCTTCTGTTTTTAACTCCATAAAGTATTCAATTCTCGAAACACATTAAAAATGATTTGCCTGCTAGGGTATGGCTTATTTTATAATTAAA EMBV3_05225 CTTTGGATGAACTTGCGTCCTTTCTCTTCTCCGCCATGGAATTCTGCTCCGTGTTCCTAG Gene GeneID:100295089|LOC100295089:XM_002691394:310_cdna Constitutive 0 NULL GeneID:100295089 11 GENE LOC100295089 NULL hypothetical protein LOC100295089 EMBV3_33884 CTGCCCAGCCTCGTGAGAGCGATTTTGGGGACCAGTAGGACTTTGACATACATCAGAGAA Gene GeneID:616292|SLMO1:XM_002697806:424_cdna Constitutive 0 NULL GeneID:616292 24 GENE SLMO1 NULL slowmo homolog 1 (Drosophila) EMBV3_21833 ACTGCCAGGTGGAACGCTGCAGGCGGCTAGGTGACTGTAATCAACAAGAGACTGAAGTCA Variant GeneID:533574|ZFAND1:XM_002692835:198_cdna 56^138 6 EMBV3_39295 GeneID:533574 14 GENE ZFAND1 NULL zinc finger, AN1-type domain 1 EMBV3_22088 GGGCACCGGAGGCAGAGAAACCCAAAAGAGAATCAGGGAATCCTGGGCGCAGCCCACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22780 CCGGAGGGCGGGAGGAACATGACATCGCGGAGATGGTTTCACCCAAATATCACTGGCGTG Variant GeneID:533590|PTPN11:XM_002694590:675_cdna 137^399 1 EMBV3_26690 GeneID:533590 17 GENE PTPN11 NULL protein tyrosine phosphatase, non-receptor type 11 EMBV3_19295 AGGATCTAGTCAAGTGTGGAGACCCATAAGGCAGAGTCTGGGGTAGGTTCCAAATGGGAA Gene BVV0102_039204 - 1 EMBV3_32261 GK000021.2:54197379-54748361 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17083 TGACGATACAAAGTAACCAAGAGCCACAGGAGCAAGCACGCACTTGGACCCTAGAGCACA Gene BVV0101_043872 + 0 NULL GK000010.2:51240536-51247754 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34240 AGCACAGGATTCTGAGTTGATACGGGTACTCTGTGCCGCTTGCTCACTACTGATGCTAAT Gene GeneID:378474|NOX4:XM_002699032:44_cdna Constitutive 0 NULL GeneID:378474 29 GENE NOX4 NULL NADPH oxidase 4 EMBV3_08565 GTGGGGGCCCTGGAATCGATGTGGGAAATACTACACCGCTATCTCCCCTATAATGCACAT Gene GeneID:507171|LOC507171:XM_002695841:274_cdna Constitutive 0 NULL GeneID:507171 19 GENE LOC507171 NULL similar to cytochrome b5 domain containing 1 EMBV3_15087 AGGCTGCTGAGACTTGTCCCACCGCGCGTGGCCTGAAGCACTTTCCCGAGGCGGGAATCC Variant GeneID:338060|NDUFA10:NM_176655:2_cdna 70^238 2 EMBV3_42637 GeneID:338060 3 GENE NDUFA10 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa EMBV3_05143 TGTGATGGGAGTTTTCTTAACATGCTGGTGTCCTTTCTTTGTCTGCATGGTCATGGACCC Gene GeneID:785788|TAAR1:XM_002690232:28_cdna Constitutive 0 NULL GeneID:785788 9 GENE TAAR1 NULL trace amine associated receptor 1 EMBV3_06507 CCTTCCGGATCTGTAGTTTAGAGGACGTTTTCATGACCTGTTCAGGGACCACATGAGCTC Gene GeneID:618286|TBC1D14:NM_001099176:47_cdna UTR3_Alt 2 NULL GeneID:618286 6 GENE TBC1D14 MGC155085 TBC1 domain family, member 14 EMBV3_14377 CTGATTTTTGACTGGAACTGGAGAGATCAGAAGTTGAGAAGGATGATGGACATTCCCGAG Gene GeneID:616567|C1H3orf26:NM_001038215:13_cdna Constitutive 1 NULL GeneID:616567 1 GENE C1H3orf26 C3orf26 MGC134033 chromosome 3 open reading frame 26 ortholog EMBV3_39896 GCATGCTCACTCACCCGTTCTCCCCGTCTCTGAAAGCCCAGTGTGAGTTCTTGCATTCTT Gene GeneID:518158|ADPGK:NM_001082438:164_cdna UTR3_Alt 2 NULL GeneID:518158 10 GENE ADPGK ADP-GK MGC148410 ADP-dependent glucokinase EMBV3_43513 GATGATAACTAACCTGATGAACTTCCTGCTCCTCAAGTATCGAGCCAAGGAGCTGACCTC Gene GeneID:524050|LOC524050:XM_002683617:2_cdna Constitutive 0 NULL GeneID:524050 4 GENE LOC524050 NULL similar to melanoma antigen family A, 10 EMBV3_07355 GGTCTTAGTTCCCCAAGCAGGAATTGAACCCAGCCTTTGCTGTGAAAGCACCAAGTCCTA Gene GeneID:509275|HIST1H1D:NM_001101066:65_cdna UTR3_Alt 1 NULL GeneID:509275 23 GENE HIST1H1D NULL histone cluster 1, H1d EMBV3_21721 ACAACTAAATTGAAAGAATTTACAGTGGACACCTGTATACCCACCACTTAGATTCTACAG Gene BVT0102_342779 + 1 EMBV3_09786 GK000013.2:52771864-52780802 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30902 ACGCACTAAGTTGTCTGAGAGTTCAAAGCATTCAGCAAGCAGTGGCAAGGCAGATCCACC Gene GeneID:100297586|LOC100297586:XM_002696285:38_cdna Constitutive 0 NULL GeneID:100297586 20 GENE LOC100297586 NULL similar to cytochrome c oxidase subunit VIIb EMBV3_06558 TTGACCTGCATACAAGTTTCTCAGGTAGCAGGTAAGGTGGTCTGGTGTTCCCATCTCTTG Gene BVT0102_063834 + 0 NULL GK000011.2:31305198-32128914 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198799 TCONS_00223092 TCONS_00073304 TCONS_00186226 TCONS_00203175 TCONS_00243312 TCONS_00072769 7 XLOC_120452 XLOC_136398 XLOC_045069 XLOC_112279 XLOC_124119 XLOC_149975 XLOC_044537 Coding TCONS_00073304 XLOC_045069 NonCoding NonCoding - 16:56150015-56150495 - TSS55148 480 1 TCONS_00073304_1 53 0.3375 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000128188012369059 0.000194366375379494 0.000758077428733275 2.75120618772332e-05 3.14436402740523e-06 0 0 7.49106956434919e-06 0 0 0 0 9.93131717843753e-06 0 0 0 0 0 NM_001102041.2 KIAA0226L Bos taurus KIAA0226-like ortholog (KIAA0226L), mRNA. 2e-57 226 92.31 0.314583333333333 0 noncoding TTGACCTGCATACAGATTTCTCAGGAGGCAGGTAAGGTGGTCTGGTATTCCCATCTCTTGAAGAATTTTCCACAGTTTGTTGTGATCCACACAAAGGCTTTGGCATAGTCAATAAAGCAGAAGTAGATGTTTTTCTGGAACTCTCTTGATTTTCCGATGATTTATAGTGTTGCAAGTCTTGCCATCACAGCAGGCAGTCACTCCCAGTCACTCCCAGTCAGGGCAGTGCCCAGGCAGGTTAGAAGCAAAGTCAGAGGCCTGCTCTGCTCTTTTGCCTCTGAAGCCTGAAGAAGACTACGTCTATTTTATTTCCCTAACACTCCACATACTCATCCTGACTCTGTTCCAAAAGGAATCATGTGGAACCTACCAGGGAACAGGGCAACCATTTCCAGCCAAAAATGAGCACACCTTAGGCTATCCTAAGGAATCCACTCAGGGCCAAGGTCACTGCTCTTGCAAAGGTAGAAGTGAGGCACT TCONS_00069712 . 5' 17612 TCONS_00069712 . 5' 17612 EMBV3_35807 TCAGCAGTGATCACCTGATTGAAATGGCCACCAAGCTCTATCGGACGACTCTCAGCCAAA Gene GeneID:537282|MYO1B:NM_001102199:11_cdna UTR3_Alt 2 NULL GeneID:537282 2 GENE MYO1B MGC160128 myosin IB EMBV3_22575 GGATCCAGGGAATTCGAAGCTGGGACGGTGTCGGCGATCAGGAAACAATAGCTTATTTAA Gene BVT0102_093851 + 0 NULL GK000001.2:154285722-154337504 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05472 TGCAGTAGATGTCACTGGAGTGCCCGCTTTTCCAGAATGTCTCCTGTCCTCATTGCCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17649 TGGAAAGAAATAGGTTGTTGCCTGCTGTACCCAGGGTGCCTAGTGTAGATGTGCAACAGC Gene GeneID:511852|ASB11:NM_001034413:20_cdna Constitutive 1 NULL GeneID:511852 X GENE ASB11 MGC128419 ankyrin repeat and SOCS box-containing 11 EMBV3_04190 GAAGAATTGGCCAGAGAGCCACTTGGGAGAATGTCATGGAAGAAGGGAGAGTGTCCAAAG Gene BVT0102_142754 + 0 NULL GK000010.2:45391346-45419702 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22733 CCCGCAACTCTTCCACACCCGCCGGCTATTGATATTTTAAAACTGAGTGTCTCTCGGGTT Gene BVT0102_367374 + 0 NULL GK000015.2:34094503-34136077 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10384 TGCGCCGGTGTGCACTGAATACTTCCTCACGAAGGAACTGTTCTAAATTAGTCTACTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20959 GCTTCCGCATTGCCAGCGCCTGCCTGGACGAGCCGAGCAGTGTACACAGGAAGACGTGTC Variant GeneID:505133|UBE2Q1:XM_002685993:341_cdna 365^689 1 EMBV3_21041 GeneID:505133 3 GENE UBE2Q1 NULL ubiquitin-conjugating enzyme E2Q family member 1 EMBV3_00234 CCGAGTAAAGGCGCTCTACGAGGAGATGAATCTGTCGGCTGTGTACATGCAATACGAGGA Gene GeneID:281156|FDPS:NM_177497:22_cdna Constitutive 3 NULL GeneID:281156 3 GENE FDPS MGC134236 farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) EMBV3_26659 TTTGGATGAATCAGAGTTTATTTAAATGTTAGTTTTATAAGAATATTAATTTGTGCAGTT Gene GeneID:100298680|LOC100298680:XM_002684851:217_cdna Constitutive 0 NULL GeneID:100298680 1 GENE LOC100298680 NULL hypothetical LOC100298680 EMBV3_15269 GCCTGCTGATCCACCCCAACCCCGAGTCGGCCCTCCCTTCTTACCTGACCCGACTCTGTC Variant GeneID:617703|UBE2S:NM_001076472:187_cdna 619^919 4 EMBV3_15815 GeneID:617703 18 GENE UBE2S NULL ubiquitin-conjugating enzyme E2S EMBV3_03262 TGTGAGGTCCCAGTCGTGGGTGTGCATTTCCTGGGATTCTGGTGGAATAACTACACAGGA Gene GeneID:540318|ZNF664:XM_002694474:308_cdna Constitutive 0 NULL GeneID:540318 17 GENE ZNF664 NULL zinc finger protein 664 EMBV3_23792 TGTGTCTGAGTGAGGCCACCTAACACCAGTTGCATCCTTCCCAACCCCACCAAAACAAGC Gene BVT0102_018052 + 0 NULL GK000023.2:15823250-15848357 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17994 CTGCGGGTCCTGCTCGTCCAGGTGGATGTGGTGACTGAATGTCTGACCACCGTCAAGTCA Variant GeneID:615637|ERCC1:NM_001076385:376_cdna 564^740 1 EMBV3_15864 GeneID:615637 18 GENE ERCC1 MGC140762 excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) EMBV3_19835 TTCAGTCTTTACAACCCTGCCATCGTTTATGCCAACCTGGATGTGCCCCCACCTGTGGAA Gene GeneID:509328|CSGALNACT2:XM_002698829:69_cdna UTR3_Alt 3 NULL GeneID:509328 28 GENE CSGALNACT2 NULL chondroitin sulfate N-acetylgalactosaminyltransferase 2 EMBV3_05799 AGGGAAAGGTTTCGTCAAGGCTGATTTCATCAAAGAGAAGCTCATGACGCAGGCAGACCG Gene GeneID:617357|MYL10:XM_002698115:378_cdna Constitutive 0 NULL GeneID:617357 25 GENE MYL10 NULL myosin, light chain 10, regulatory EMBV3_09167 CCTTCATTGAGCTTGAGGTTAAAGGGCCAGGATTACCCTCCTCTGAAGATGATATGTAAA Gene GeneID:510956|RRS1:NM_001075481:19_cdna Constitutive 0 NULL GeneID:510956 14 GENE RRS1 NULL RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) EMBV3_09250 ATTAACTTGCTTAAGGAATGTCACAAAAATTACATGGAAAAGAGGAACAAGAGCAGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01249 TAGCTGGGGTTCCTCACCTGGGGGCTGGGAAGGGAGATCTAATTCTGCAAGTGACAATAT Gene GeneID:505096|APBB1:NM_001075186:10_cdna Constitutive 0 NULL GeneID:505096 15 GENE APBB1 MGC139452 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) EMBV3_22226 CCTGGGAGACAGCGCTGTGGGCAAGTCCAAACTTTTGGGACACAGCAGGCCAAGAGCGGT Variant GeneID:515671|RABL2B:NM_001034508:43_cdna 174^283 3 EMBV3_08899 GeneID:515671 5 GENE RABL2B MGC127908 RABL2A RAB, member of RAS oncogene family-like 2B EMBV3_01823 TCTCAGGAGAGTATGCAGCTGTGTAGCCGTTTCGATGGAGCCGTCACTCTTACCCACTCT Gene GeneID:513845|OVCA2:NM_001034601:109_cdna Constitutive 0 NULL GeneID:513845 19 GENE OVCA2 NULL ovarian tumor suppressor candidate 2 EMBV3_22456 ATTTTTGTCCCTGGTGGGTGAATTAGGAAGCTGCATTATTTTGGAGGACAAGTAGCACAA Gene GeneID:535820|EIF2AK3:NM_001098086:122_cdna Constitutive 0 NULL GeneID:535820 11 GENE EIF2AK3 NULL eukaryotic translation initiation factor 2-alpha kinase 3 EMBV3_36674 GGCCTGGTGCGAACTGAAATCGTGCGCTGGTTCAAGGAGAACAGATGCTTGCTCAAAACT Gene GeneID:515040|ZHX2:XM_002692632:95_cdna Constitutive 0 NULL GeneID:515040 14 GENE ZHX2 NULL zinc fingers and homeoboxes 2 EMBV3_09555 GAAGATGGAAAAAGCAAGGAAATGAACTCTCCCTTAGAGCCTCCAAATAGAACGCAGGCC Gene BVV0102_100067 - 1 EMBV3_05760 GK000011.2:13248621-13394049 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024106 1 XLOC_014442 NonCoding TCONS_00024106 XLOC_014442 NonCoding NonCoding - 11:13352240-13354653 - TSS17772 1217 2 TCONS_00024106_3 63 0.582580115036976 2 0.496268656716418 0 0.000148621087118712 0 0.000177409360131049 2.43410471141538e-05 5.87848030947473e-06 0 0 0 0 0 0 0 0 0 0 0 2.06170106550738e-06 8.24922042267587e-05 4.13639420315491e-05 0 0 0 0 0.000119554554824629 1.73676364600547e-05 1.92577420505958e-05 0 0 0 XM_005195889.1 LOC101902386 PREDICTED: Bos taurus protein kintoun-like (LOC101902386), 9e-66 255 81.21 0.221857025472473 NM_019018.2 FAM105A Homo sapiens family with sequence similarity 105, member A (FAM105A), mRNA. 3e-28 131 72.27 0.207888249794577 0 noncoding 0 0 0 0 0.0303318016177079 0.807316204962729 0.0152983816538274 0.747465336139684 GAGGGAGAGAAGATGCCTCACTGCTTACTTTAAAGATGGAGGAAGAGGCCATGGGCCAGGGAACGTAGGTGGCCTCCAGAAGATGGAAAAAGCAAGGAAATGAACTCTCCCTTAGAGCCTCCAAATAGAACGCAGGCCTGCAGACATCTTGATTTTTGCTCATTGAAACCTATTTTTGACCTCAAGGCTCCAGAACTTCAAGATAATAAATGTATATCGCTTTAAACAATTAAGTTTGTGGTACTTTGTTAGAGTAACAAGAGGAAATGAATACACTGTGTGACCTTCAACAAGGTCCTTTTGCCAAAGATTTCTTATCTGCAAAATTACTTCCCTGATGGACCAGTGGTTAGGAATCCACCTACCATTTCAGGTGGCAGAGGTTCATTCCTTTGTACAGGAAGCCTCCACGTGCCACTGGACAACTAAGCTCATCCTCCACAAGGGAAGCCATCGCAGTGAGAAGCCCGCACACTGCGACTAGAGAGTAGCTCTTGCTCCCCACAACTAGAGAAAGCCTGCACATAGCAATGAAGATGCAGTGCAGTGACAAATGAATCAAATAATTTTTTAAAGCCAAGAGGTTATTACAGAATATTGAGTAGAATTCCCTGTACAATACCATGTCTGAAAGATTGCAGAGTAGAAGAATGTACACTTATCTTCCCCTGTGAGAACACCGCTAAACAACCATTGACAGGATGATGTTGGAACCCACGAAAAAAAGATACCCCGTCCAAGGACAAAGGAGAAGCCGCAGTAAGATGGTAGGAGGGGTGCAATCATGTTTAAATCAAGCCCCATACCCACCAGAGACTCTTGGAGGGCACAAAGAAAAACCTTGTGTGCACCAAGACACAGGGAAAGGAGCATTGCAGCCCACAAAAGACTGAGCCAGACCTGCCTGTGAGTGTTTGAGGGTCTTCTGCAGAGGCCTGGGTCAGCACTGCAGTACGTGAACACTGGCAGCAGCAGTCCTGGGAGGTGCGGTGTGTGGCATGAGTCCTCTTGAAGGAGGTCACCATTAGCCCCACCATAGAGCTTCCAGTCATCTGAGTTAAATTCACCCATTCCAGTCATTTTAGTTCACTGGTTCCTAAAATGTTGATGTTTACTCTTGCCATCTCCTGTTTGACCACTTCTAATTTACCTTGATTCATGGACCTAACATTCCAGGTTTCTATGCAGTATTGTTCTTTACAGCATCAGCCTTTACT TCONS_00024107 s 5' 2888 TCONS_00024107 s 5' 5300 EMBV3_38312 TTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGAT Gene BVT0102_410217 + 0 NULL GK000030.2:83120254-83228462 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00178735 TCONS_00240375 TCONS_00149039 TCONS_00033207 TCONS_00148450 TCONS_00178732 TCONS_00149040 TCONS_00218950 TCONS_00149037 TCONS_00218953 TCONS_00206816 TCONS_00098202 TCONS_00117596 TCONS_00098200 TCONS_00207545 TCONS_00167122 TCONS_00168479 TCONS_00230834 TCONS_00162301 TCONS_00088420 TCONS_00206815 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00201119 TCONS_00050935 TCONS_00154285 TCONS_00098198 TCONS_00131536 TCONS_00185573 TCONS_00222139 TCONS_00178730 TCONS_00178729 TCONS_00161424 TCONS_00253351 TCONS_00233533 TCONS_00088422 TCONS_00218954 TCONS_00106013 TCONS_00178733 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00106012 TCONS_00230355 TCONS_00222176 TCONS_00185604 TCONS_00240373 TCONS_00223049 TCONS_00231769 TCONS_00157045 TCONS_00217532 TCONS_00033186 TCONS_00054136 TCONS_00130054 TCONS_00207410 TCONS_00056187 TCONS_00011614 TCONS_00157046 TCONS_00063809 TCONS_00178734 TCONS_00158779 TCONS_00220551 TCONS_00162571 TCONS_00186835 TCONS_00142474 TCONS_00222177 TCONS_00218948 TCONS_00142473 TCONS_00230354 TCONS_00148446 TCONS_00207147 TCONS_00217533 TCONS_00168478 TCONS_00142472 TCONS_00129561 TCONS_00021875 TCONS_00207544 TCONS_00157807 TCONS_00231774 TCONS_00066112 TCONS_00011613 TCONS_00176791 TCONS_00167922 TCONS_00186489 TCONS_00238284 TCONS_00230829 TCONS_00157808 TCONS_00071703 TCONS_00131535 TCONS_00238280 TCONS_00232767 TCONS_00178886 TCONS_00031770 TCONS_00222184 TCONS_00156869 TCONS_00249554 TCONS_00231772 TCONS_00162567 TCONS_00106011 TCONS_00106016 TCONS_00231775 TCONS_00033206 TCONS_00098201 TCONS_00162570 TCONS_00071451 TCONS_00158314 TCONS_00136035 TCONS_00186834 TCONS_00071397 TCONS_00154284 TCONS_00033205 TCONS_00012044 TCONS_00072307 TCONS_00178731 TCONS_00131538 TCONS_00207543 TCONS_00063811 TCONS_00212984 TCONS_00222175 116 XLOC_090921 XLOC_108508 XLOC_147039 XLOC_090916 XLOC_019441 XLOC_090330 XLOC_108505 XLOC_090917 XLOC_132269 XLOC_090914 XLOC_132272 XLOC_125336 XLOC_058448 XLOC_071762 XLOC_058446 XLOC_126060 XLOC_101958 XLOC_103118 XLOC_140324 XLOC_099183 XLOC_053207 XLOC_125335 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_122767 XLOC_031050 XLOC_094045 XLOC_058444 XLOC_080241 XLOC_111626 XLOC_135448 XLOC_108503 XLOC_108502 XLOC_098315 XLOC_156291 XLOC_143015 XLOC_053209 XLOC_132273 XLOC_062697 XLOC_108506 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_139845 XLOC_135485 XLOC_111657 XLOC_147037 XLOC_136355 XLOC_141257 XLOC_095505 XLOC_131531 XLOC_019420 XLOC_031945 XLOC_078765 XLOC_125926 XLOC_033990 XLOC_007165 XLOC_095506 XLOC_038535 XLOC_108507 XLOC_097231 XLOC_133868 XLOC_099452 XLOC_112886 XLOC_086899 XLOC_135486 XLOC_132267 XLOC_086898 XLOC_139844 XLOC_090326 XLOC_125665 XLOC_086897 XLOC_078274 XLOC_012548 XLOC_126059 XLOC_096262 XLOC_141262 XLOC_040830 XLOC_007164 XLOC_106565 XLOC_102758 XLOC_112541 XLOC_144951 XLOC_140319 XLOC_096263 XLOC_043473 XLOC_080240 XLOC_144947 XLOC_142251 XLOC_108659 XLOC_018015 XLOC_135493 XLOC_095329 XLOC_152497 XLOC_141260 XLOC_099448 XLOC_141263 XLOC_019440 XLOC_058447 XLOC_099451 XLOC_043222 XLOC_096768 XLOC_082254 XLOC_112885 XLOC_043168 XLOC_094044 XLOC_019439 XLOC_007594 XLOC_044076 XLOC_108504 XLOC_080243 XLOC_126058 XLOC_038537 XLOC_130301 XLOC_135484 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_31348 TGGGTCTCAGACCCCAGGACTACATTTTAATACAGCAGAGGCAGGGGCGTATGCAAAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30592 ACAAAAACCCTGGGGATCATTCTGGGGGCCTTTATCGTCTGCTGGCTGCCCTTCTTTGTA Gene GeneID:407136|HTR1D:XM_002685714:409_cdna Constitutive 0 NULL GeneID:407136 2 GENE HTR1D 5htr1d 5-hydroxytryptamine (serotonin) receptor 1D EMBV3_08824 AGTCTGCGTATTGTTCCACAGCTAGGATGCTCTGACTTCGGAGTTTGAAGACCGCTGCAA Gene BVV0102_152043 - 0 NULL GK000021.2:66125470-66159546 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120012 1 XLOC_073029 Coding TCONS_00120012 XLOC_073029 Coding Coding CCNK 21:66144443-66175805 j TSS89719 3167 1 TCONS_00120012_4 582 12 0.899397340646025 2.91793155687496e-19 2.10418995998425e-20 1.07619195311232e-37 4.14351841272625e-18 4.62000998329488e-13 5.19909443333107e-14 8.38353617521545e-14 1.81798871246799e-32 5.91910867709352e-14 5.00937789837973e-29 3.73718307982467e-17 6.19035690770382e-11 3.76577941036531e-05 2.68807723648432e-11 7.97153457652518e-16 3.341886465064e-10 6.80612882213553e-32 5.95612389482726e-39 2.56345258343559e-11 5.63030400930562e-18 8.09665048737152e-15 1.61808200069656e-32 6.24124567506218e-20 2.95764385375582e-20 8.08372861377323e-25 7.32614807212503e-18 1.58721787666668e-15 0.000180191099558492 1.08488956183814e-10 8.33164751337219e-17 XM_005222216.1 CCNK PREDICTED: Bos taurus cyclin K (CCNK), transcript variant X1, mRNA. 0.0 4662 100.00 0.815914114303757 NM_001099402.1 CCNK Homo sapiens cyclin K (CCNK), mRNA. 0.0 2958 86.11 0.791916640353647 TCONS_00120012_4 sp|O75909|CCNK_HUMAN CCNK_HUMAN Cyclin-K; 0.0 791 94.85 0.998281786941581 1 coding 0 0 0 0 -0.0424362187166059 0.777797595830437 0.0213706158283539 0.651608070968852 ATCTTTCCAGTCATTTCGCAGTGTGCCGGTCCCAGCCTTGGTAAAGCTTGAGTCTGCGTATTGTTCCACAGCTAGGATGCTCTGACTTCGGAGTTTGAAGACCGCTGCAAAGAAGCTTAGAGGTTTTAGAGAATTTCTTCATTCTGAATGAAAGAGAAGAGGATGAGAAAGCAAGAAAAATTTAAAGGATTCTAACATTTTTCCGAAAGTCTTTTGGAAAGACCAAGTCTACTTCAATAAATGAAGGAGAATAAAGAAAATTCAAGCCCTTCAGTAACCTCAGCAAACCTGGACCACACAAAACCATGTTGGTACTGGGATAAAAAAGACTTGGCTCATACACCCTCACAGCTAGAAGGACTTGATCCAGCCACTGAGGCCCGGTACCGCCGAGAAGGGGCACGGTTCATCTTTGATGTGGGCACACGTTTGGGACTACACTATGACACCCTGGCAACTGGAATAATTTATTTTCATCGCTTCTATATGTTCCATTCCTTCAAGCAATTTCCAAGATATGTAACAGGAGCTTGTTGTCTCTTTCTGGCTGGGAAAGTAGAAGAAACACCAAAAAAATGTAAAGATATCATCAAAACAGCACGGAGTCTATTAAATGATGTACAATTTGGCCAGTTTGGAGATGACCCAAAGGAAGAAGTAATGGTTCTGGAGAGAATCTTACTGCAGACCATAAAGTTCGATTTACAGGTAGAACACCCGTACCAGTTCCTGCTCAAGTATGCAAAACAGCTCAAAGGTGACAAAAACAAAATTCAAAAATTGGTTCAAATGGCATGGACATTCGTCAATGACAGTCTCTGCACGACCTTGTCACTACAGTGGGAACCAGAGATCATAGCAGTGGCGGTGATGTATCTTGCGGGACGTTTGTGCAAATTTGAAATACAGGAATGGACCTCCAAACCCATGTACAGGAGATGGTGGGAGCAGTTCGTGCAAGATGTCCCTGTGGATGTTTTGGAAGACATCTGCCACCAAATCCTGGATCTGTACTCCCAAGGGAAACAACAGATGCCTCATCACACCCCCCACCAGCTGCAGCAGCCCCCATCTCTCCAGCCCACACCGCAAGTGGCACCAGTGCCACCGTCACAGCCGCCTCCAGGCCCCGAGCCGCCCCAGCCCCCGCAGAAGGACTCGCAGCAGCCGGCCCAGCAGCCGCCGCCGCCGCCAGCCCAACCACCCAAGAAACCATCCCCGCAGCCTAGTCCCCCCCGCCAGGCGAAGCGAGCCGTGGTTGTTTCTCCCAAAGAAGAGAACAAAGCAGCAGAACCACCACCACCTAAAATCCCCAAAATCGAGCCCACTCACCCTCCGTTGCCTCCAGCCCATCCACCTCCAGACCGGAAGCCACCCCTCGCAGCTGCTTTGGGTGAGGCCGAGCCTCCAGGCCCCGTGGAAGCCAGCGACCTCCCCAAGGTCCAGATCCCTCCTCCGGCCCACCCAGCGCCCGTGCACCAGCCGCCGCCGTTGCCGCACCGGCCGCCGCCTCCACCGCCCTCCAGTTACATGACGGGGATGTCCACCAGCAGCTCCTACATGTCCGGGGAGGGCTACCAGAGCCTGCAGTCCATGATGAAGACCGAGGGCCCCTCCTACGGGGCACTGCCCCCCGCCTACGGCCCGCCGGCCCACCTGCCCTACCACCCCCACGTCTACCCACCCAACCCGCCTCCGCCGCCCGTGCCCCCGCCCCCCGCCTCCTTCCCGCCGCCTGCCATCCCTCCCCCAACTCCTGGCTACCCCCCACCCCCGCCCACCTACAACCCCAACTTCCCGCCCCCACCCCCTCGCCTGCCCCCGACCCACGCGGTCCCGCCGCACCCGCCCCCGGGCCTGGGCCTGCCACCGGCCAGCTACCCGCCCCCGGCGGTGCCCCCGGGAGGACAGCCCCCTGTGCCCCCGCCCATCCCCCCACCCGGCATGCCTCCCGTCGGGGGTCTGGGGCGGGCAGCCTGGATGAGATAACCTTTGACGCCTCTCTTTTCCTTTGTTGTTTTTTTAAAAGTTTTTCTAATCAACTTGAAAAGTAGTTTAAGTGGGTAAGCAGCAGAGTACCTTGAATAATCTCAACAGTTGTAGTATGGGAAGAAGTGGACGGGACCCCGGAGATGAAATCAGGGTGCTCCTGCGCACCTGGAGAGTGGGCAGAGCAGCCCGCGGGGGGCCCAGGCCGCCGGCTGTGACCCTACCGCCTCTGGTCTCAGCGTGTCCTCGGGCCCTGCACCGGGTTACTTCACTCTGGTGAGAACGTTCACACGCAGCTTCAGTGAGGAGTGCGTTTCCTTCTAGAAACCAGTGCCTATTTTCCCTGGAAACTCGGTTTTCAGTAGTCCAGCTCCTTCTGAAGTCAAGCTCTCGTCATTGCTGTCACTCCCGGTGTTCTCGCCCGTGACTCCCAGGCCAGATGAACGGCTGTTTGATTTAGAGAAACCCACACCCTTTGTGTTCAAGTTACTCTGAAGGGGTTGCCTTGCTTGGATGGCTCTCTTCTTTTTCCTCCAGGGAGAAAGGGAGAGATGTTCTTGGAAGTAATGTATGTTTACATCAATTTGCAAATTCCTATACATAGAGATATATTTTTTAAGTGTGAATGTAACAACATACTGTGAATTCCATCTTGGTTACAAATGAGACTCCTTCAGTCAGTTACCCAATAAAATCAGTTCTGAAATGGCCCCTTTGGTTTGTTACGGGCAGAAGAGGGGGCGCTCCTGGGGTTTGCAGCCCAGAAGCAGGTGGTCTTCCTGGGGCACAGGAGCAGGGCATGGAGGAAGGGCCCCCAGGAGATGGCCCAGGGGGGCCTTCAGGGGCCCGCCCCCCACATCAGGCACCGGCCGGGCTTTCTCCGGAGGAAGTAGTTGAATGTGGTGCTGGTTTGGGATTGTCCATCTCCCTCCATAGGCAGGTCCCTGGGTCAGACCTGGGTTTAAATTGGAAACCCTTTCCCCTGCTGGTCTGACTGGAGGCCCTGGAGCAGCAGGCATCAGCCCCACTATCCGCGCCAAGGGGCCCCATCACCAGAGACAAATGAGCACTGCGCACGGAGGCTTGCAAGGAGCCTTTATTTATCTAGCACAAAGTATACACTATCACAATCTTCTCTGTTAACTCCTTTTACTAAAATAGTTCAAATCAATGTTTTT EMBV3_34680 AACTGAGCCAAGATGCTACGGAATCTTCTGGAGGATAATGGAATTCCAGTGCATCTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24939 CCTGATGTGCAGAGTGAAGGACTTCTGGGTTCTAGCAGGAGTGATGAGCTGGGGATCAAA Gene GeneID:530739|LOC530739:XM_002694325:67_cdna Constitutive 0 NULL GeneID:530739 17 GENE LOC530739 NULL similar to epidermis-specific serine protease-like protein EMBV3_15473 TGCAATCTGCAAGCCCCTCCACTATTCTGTCCTCATGCACCCTCAGCTCTGTTGGAAGTT Gene GeneID:518468|LOC518468:XM_002697456:68_cdna Constitutive 0 NULL GeneID:518468 23 GENE LOC518468 NULL similar to olfactory receptor Olfr1364 EMBV3_22184 TCTTCTGCCTGTATGTGCTGTCACTCTGTGCTGCCTTATTCTCGATACCGTTGCTGATGC Gene GeneID:787789|TAS2R38:XM_002687080:248_cdna Constitutive 0 NULL GeneID:787789 4 GENE TAS2R38 NULL taste receptor, type 2, member 38 EMBV3_32119 GGATGCCGAAGTCGACGCTACCCCTAGGTGTTCTTAAGTTTGCCCGCCTTGTTAAGTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04617 ACAGTTCTGTAAGTGAATTTTCCGGGGAGAACAGACGTGAACGTGACGCCAGGCAAGATG Gene GeneID:540772|RIOK2:XM_002689405:32_cdna Constitutive 0 NULL GeneID:540772 7 GENE RIOK2 MGC137306 RIO kinase 2 (yeast) EMBV3_08891 TTTCAAGTTGGTTGAACCCCCCAAGGAGGCTAAGGTCTCCAAGATGGATGTGTCCCCCAA Gene GeneID:617958|MGC134503:NM_001076486:323_cdna Constitutive 0 NULL GeneID:617958 25 GENE MGC134503 NULL hypothetical protein LOC617958 EMBV3_33256 TCAGTCCCAACCATGATAACTGACACCAGGACTGCATATGTAAGCACAACGGCCAAGCCT Gene GeneID:785165|MGC157332:NM_001102336:19_cdna UTR3_Alt 2 NULL GeneID:785165 29 GENE MGC157332 NULL hypothetical protein LOC785165 EMBV3_04398 ACATCCGGCGGGAGTTCATCGAGAAATATGACAAGTCTCTCCACCAAGCCATTGAGGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36881 CAGCTCAGTGGTTTCCCAGGGGCTGGAAGTGGGGGAAGGGATGGCTACCAGTAGGAATTT Gene BVT0102_440439 - 1 EMBV3_09693 GK000018.2:39571581-39615296 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12478 CCATGCTAACTGCAGCCAAAGGTGATGTTCGGAGGCTGGAAACAGTATTAGAATCCATCC Gene GeneID:538841|ZSWIM6:XM_002696311:6_cdna UTR3_Alt 2 NULL GeneID:538841 20 GENE ZSWIM6 NULL zinc finger, SWIM-type containing 6 EMBV3_38559 GCATAGCAGATAAAATACAGCAAATCCTAACCAGCACAGGTTTTAGTGACAAGCGGGCCC Gene GeneID:509725|DIMT1L:NM_001046036:12_cdna Constitutive 0 NULL GeneID:509725 20 GENE DIMT1L HSA9761 MGC137746 DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) EMBV3_32006 TGCAAGACTGTGCCCTTCCCCTCCTGAAAGGTTATTGTGGTGGGAAATCCAGCCAATACC Variant GeneID:535182|MDH1:NM_001034628:116_cdna 254^429 1 EMBV3_05399 GeneID:535182 11 GENE MDH1 MGC127061 malate dehydrogenase 1, NAD (soluble) EMBV3_29068 CTCCAGACTGCAGACAAATGCTGTGAATGGGCTTGTAAACTTGACCATGCTTGATCTCTG Gene GeneID:100337501|LOC100337501:XM_002689837:129_cdna Constitutive 0 NULL GeneID:100337501 8 GENE LOC100337501 NULL osteomodulin-like EMBV3_04049 TACCCGACATCTGCATCCTCAGAGCCAAATGCGACTAGAGAACAGCACAGTCATGCTGAC Gene BVT0102_205343 - 1 EMBV3_29228 GK000020.2:7948861-7973675 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09457 GGAGTAGTGGCTCTGCTCTAAGATTTCATAAGTGCTTTTAAAAATCATAAATGTTTCCAC Gene GeneID:533191|TMTC1:XM_002687719:22_cdna Constitutive 0 NULL GeneID:533191 5 GENE TMTC1 NULL transmembrane and tetratricopeptide repeat containing 1 EMBV3_38162 CCTCTTGGATATCTATAGTTTCTGGCTCAAAAGGGAGTTAAGCCACAGGCCAAGACAGTC Variant GeneID:513278|NOLC1:NM_001075608:120_cdna 237^498 1 EMBV3_16775 GeneID:513278 26 GENE NOLC1 MGC140593 nucleolar and coiled-body phosphoprotein 1 EMBV3_36791 GCTCATTGGAGGTTGTCGTAACCAAGATGATGAACTCAGGGTAAACCAACTGAGAAGGCT Gene GeneID:540845|ALG11:XM_002691795:423_cdna UTR3_Alt 2 NULL GeneID:540845 12 GENE ALG11 NULL asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast) EMBV3_35697 GGTGATTAAGAATCCAGTGTCAGACCACTTCCCATGGCAAGGTGGACGTGGAGTACACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19341 GTATATATGTAAAACTATGCTGTAGCAAGGTTGCTTGGAATATCAGCACACTAGAGTCAC Gene GeneID:534578|VCAM1:NM_001101158:143_cdna Constitutive 0 NULL GeneID:534578 3 GENE VCAM1 NULL vascular cell adhesion molecule 1 EMBV3_02168 AAGCTCTCGGATTCTCGCGGCTGAGTTAGGGATTCAACTGCCACCATGTCGAGCAAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10123 CTTGGTTGAATGCCCCTTCCCCAAACCTTCCCTTTAGGTGGCTGGTAGTAGAGGGGTAAA Gene GeneID:526472|LDB1:XM_002698449:448_cdna Constitutive 0 NULL GeneID:526472 26 GENE LDB1 NULL LIM domain binding 1 EMBV3_15188 GCAAAGATCAGTCACCTGGAAACAGAGCTCAAACAAGTATGCCACACCGTGGAGACTGTG Gene GeneID:100141142|SYCE2:XM_002688757:59_cdna UTR3_Alt 2 NULL GeneID:100141142 7 GENE SYCE2 NULL synaptonemal complex central element protein 2 EMBV3_03110 AGTTCCCTGCCCCACCCCTGTCTGCTCATCCCACCACACAAAGGCCTCTTTATTTTTGAA Gene GeneID:786855|TMEM200C:XM_002697795:392_cdna UTR3_Alt 1 NULL GeneID:786855 24 GENE TMEM200C NULL transmembrane protein 200C EMBV3_33441 CCACTGCATTGGCTCAGTTTGTGTTTCTGCAGAGGATGATGTTTTCTGTGTAATCACACC Gene GeneID:510347|MRPL15:NM_001075445:23_cdna Constitutive 2 NULL GeneID:510347 14 GENE MRPL15 MGC143360 mitochondrial ribosomal protein L15 EMBV3_38332 TTATGCCCACGGCACTACCTGTGTTTGAATGCAGCTCTTAACCTCTGCTGTCCCCAGTGG Gene BVT0102_364555 - 1 EMBV3_33290 GK000011.2:104015804-104128897 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29599 CACCCAAGTCCAAGAAACCCAGAGAGTACCAAACAGGATAAACCCAAGGAGAAACACCCC Gene BVV0102_064077 + 0 NULL GK000030.2:47585897-47617237 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00066191 TCONS_00207277 TCONS_00022579 TCONS_00156637 TCONS_00214738 TCONS_00249013 TCONS_00185686 TCONS_00115687 TCONS_00141680 TCONS_00115729 TCONS_00030974 TCONS_00220662 TCONS_00187806 TCONS_00040555 TCONS_00252354 TCONS_00249292 TCONS_00189889 TCONS_00157441 TCONS_00250931 TCONS_00040584 TCONS_00210523 TCONS_00187583 TCONS_00249282 TCONS_00231021 TCONS_00190337 TCONS_00189806 TCONS_00170310 TCONS_00250580 TCONS_00152647 TCONS_00079671 TCONS_00110355 TCONS_00056970 TCONS_00230725 TCONS_00148670 TCONS_00062742 TCONS_00255185 TCONS_00165812 TCONS_00250544 TCONS_00117462 TCONS_00019962 TCONS_00175821 TCONS_00232966 TCONS_00245928 TCONS_00141532 TCONS_00020011 TCONS_00064058 TCONS_00238893 TCONS_00251214 TCONS_00008117 TCONS_00040697 TCONS_00197112 TCONS_00233559 TCONS_00238308 TCONS_00240534 TCONS_00230489 TCONS_00022065 TCONS_00032588 TCONS_00020016 TCONS_00210648 TCONS_00239374 TCONS_00232347 TCONS_00108588 TCONS_00160991 TCONS_00210178 TCONS_00251452 TCONS_00201770 TCONS_00253720 TCONS_00207754 TCONS_00135548 TCONS_00056147 TCONS_00021194 TCONS_00189353 TCONS_00019991 TCONS_00185880 TCONS_00229354 TCONS_00175849 TCONS_00224114 TCONS_00098220 TCONS_00036946 TCONS_00199613 TCONS_00020022 TCONS_00198661 85 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_040908 XLOC_125795 XLOC_013249 XLOC_095097 XLOC_130757 XLOC_151956 XLOC_111739 XLOC_069856 XLOC_086108 XLOC_069898 XLOC_017223 XLOC_133979 XLOC_113849 XLOC_024371 XLOC_155295 XLOC_152235 XLOC_115926 XLOC_095896 XLOC_153874 XLOC_024400 XLOC_129033 XLOC_113628 XLOC_152225 XLOC_140510 XLOC_116372 XLOC_115843 XLOC_103556 XLOC_153523 XLOC_092412 XLOC_048555 XLOC_066259 XLOC_034773 XLOC_140215 XLOC_090550 XLOC_037469 XLOC_158117 XLOC_100652 XLOC_153487 XLOC_071628 XLOC_010640 XLOC_105600 XLOC_142448 XLOC_150855 XLOC_085960 XLOC_010689 XLOC_038784 XLOC_145559 XLOC_154157 XLOC_003677 XLOC_024513 XLOC_118775 XLOC_143041 XLOC_144975 XLOC_147198 XLOC_139979 XLOC_012736 XLOC_018828 XLOC_010694 XLOC_129158 XLOC_146040 XLOC_141832 XLOC_064493 XLOC_097884 XLOC_128688 XLOC_154393 XLOC_123415 XLOC_156659 XLOC_126269 XLOC_081771 XLOC_033950 XLOC_011867 XLOC_115392 XLOC_010669 XLOC_111933 XLOC_138849 XLOC_105628 XLOC_137410 XLOC_058466 XLOC_021259 XLOC_121266 XLOC_010700 XLOC_120315 Coding TCONS_00229354 XLOC_138849 NonCoding NonCoding - 8:2557529-2558613 - TSS170858 1084 1 TCONS_00229354_2 118 0.997232472324723 1 0 2.51027591171023e-06 0 2.13423121305016e-06 0 0 0 1.84450574633871e-06 0 0 6.46362951175192e-05 3.99413746252622e-05 1.55532181485613e-05 1.35645042964244e-05 0.00014489275163546 5.78133364332646e-06 0.002164817523245 0.00318171808389475 0.00462562329167112 0 3.31707035394452e-06 0 0.00320644011591593 0.00184796150768437 0.00222080368255703 0 6.49950411920376e-07 0 0.000293836862500732 0.00101979446118106 0.000306281287184322 XR_229156.1 LOC101907943 PREDICTED: Bos taurus uncharacterized LOC101907943 (LOC101907943), 2e-79 300 80.47 0.310885608856089 0 noncoding 0 0 0 0 0.044186773713356 0.68151882467206 -0.00421894400467007 0.937197478317913 GGGGTGTTTCACCTTGGGTTTATCCTGTCTGGGACTCTCTGGGTTTCTTGGACTTGGGTGGCTATTTCCTTCCCCATTTTAGGAAAGTTTTCAACTATTATCTCCTAAAGTATTTTCTCATGCCCTTTGTTTTTGTCTTCTTATTCTGGGACTCCTATGATTCAAACATTGGGGCCTTTAACATTGTCCCAGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCCTTTTTCTTCTTTCCTCTCTGCTTCACTTACTTTCATCATTCTATCTTTCACATCACTTATCCTATCTTCTGCCTCAGTTATTCTACTATTGGTTCTGAAAGGTTGTTGTTGAATCACGCGAAGACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGCGGCAGAAAGAGTACCCGCCTGCTAGTCTTCAGCTGGATGTTATATAGTCACTAGTAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGAATGGCACCAGGCCCCTCACTCATAAGATGCATTTTGGGATAGTCTTGGCGCCAAATGGTTTATCCTGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGACAGATCACCATACAAATAGTTTCATTTACATAGATTAGGAGAACAATATCCATACTGGTTTGTCAAGTAGGTTCTGGGCCAAGAGGCGGAACCAACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAAAAAGGCATTGGTTATCTCTAGGCTCAAGAATAGCTAACTTCAGGCGAAACCAGGTGTCATTATGGCCACACAGTATTTTAAGAGAAACCTCCCTTTAAATTTGTATAGAGAAGGAAAAAATATTGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGGCTATTTCCTCCATTTGGAGACCCCTGGCCTTCCTGCCTGTTACCCTCTCA TCONS_00226773 . 5' 692321 TCONS_00226773 . 5' 692321 EMBV3_04060 CACCGACCTGGACGTGGCCAATTTCTATGTGTCGCAGCTTCAGACTCCAATAGGCATTCA Gene GeneID:618024|GEMIN7:NM_001076489:430_cdna Constitutive 0 NULL GeneID:618024 18 GENE GEMIN7 MGC142418 gem (nuclear organelle) associated protein 7 EMBV3_39791 AAAACTTGCTAAAACATGGAGTGTGCGCCCGTCTAGCCCATTTCAGTGCTTCACACGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09507 TATTAGATACAGTGGTGCCCCGCCTGTCTACCCCTTCTATAGGCACTGATGCCCTCCAAT Gene GeneID:614692|LOC614692:XM_002688753:111_cdna Constitutive 0 NULL GeneID:614692 7 GENE LOC614692 NULL similar to Chromosome 19 open reading frame 57 EMBV3_12588 TCTCCTCTCACCGTCGGGACGACAGAAAATCAGAGAAAGCCTTCCATCATCCTCAGCAAG Gene GeneID:783258|DCP1A:NM_001102330:340_cdna UTR3_Alt 2 NULL GeneID:783258 22 GENE DCP1A MGC159576 DCP1 decapping enzyme homolog A (S. cerevisiae) EMBV3_05597 ACTGTTACTCAGTTTTAAATGCCACCACTAAGGGAAAGAGAAACTATTGAAGAAATAATT Gene GeneID:613426|TMEM167B:NM_001128503:185_cdna Constitutive 1 NULL GeneID:613426 3 GENE TMEM167B C1orf119 C3H1orf119 MGC139618 transmembrane protein 167B EMBV3_00167 GGTCACTGACAATACATCTAGTTTTTCCTTAGGAAGTAATCATGAACTATGCAAACTCTG Gene GeneID:615452|TBC1D19:NM_001076938:204_cdna Constitutive 2 NULL GeneID:615452 6 GENE TBC1D19 MGC143093 TBC1 domain family, member 19 EMBV3_31335 AGAAAGCCGCCGGGTGCCACAACGCCTTCATTGTCCTCTGCATCGAGAACAGCTTCATGA Gene GeneID:508076|COL18A1:NM_001083388:24_cdna Constitutive 0 NULL GeneID:508076 1 GENE COL18A1 MGC140499 collagen, type XVIII, alpha 1 EMBV3_15145 GAGAACCATGATGCTAGATGGAAGCTACAGTGAGTCCGAGGCCAACAGCCTAGCTGGGTA Gene GeneID:100336524|LOC100336524:XM_002690193:38_cdna Constitutive 0 NULL GeneID:100336524 9 GENE LOC100336524 NULL gamma-aminobutyric acid receptor subunit rho-2-like EMBV3_41419 GCTGTCCTCCTTGGAAGCAGAAAGCACAAGTGAATCAGGAAATCACAGTTCTCAATAAGG Gene BVT0102_207012 + 0 NULL GK000016.2:4242622-4274966 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28208 GGGTTGAAATGTTAAATGTATGGGCTTCCTGGATGGCTCAGCCATAAAGAATCTTCCTGC Gene BVT0102_211158 + 0 NULL GK000029.2:5568681-5615910 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09954 GGTAAGCCTAGGAGAAGAAAGATGGGAAAACCGGGATTCCTTTTCAGAAGCACCTGTGTG Gene GeneID:519310|EPB41L4B:XM_002689918:43_cdna Constitutive 0 NULL GeneID:519310 8 GENE EPB41L4B NULL erythrocyte membrane protein band 4.1 like 4B EMBV3_17785 GAAGACGTCCGAGCTACTGAAAAAGACAAGGTGTCCAGATGGTCCCCATCAGCTGGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36766 CTAGGGAGAAAAACGAGAGTCAAACAGGGGAAAGGGCAATCAAGCCAGTAATCACACTCC Gene BVV0101_026856 - 1 EMBV3_39851 GK000030.2:66949674-67800434 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26153 GAGTCTCCCAGTGATAGCCGAACAAGATGCTTAAAATTGGGCTTTCGTCCTGCCCTCCTT Gene GeneID:327676|ARHGDIB:NM_175797:19_cdna Constitutive 1 NULL GeneID:327676 5 GENE ARHGDIB NULL Rho GDP dissociation inhibitor (GDI) beta EMBV3_41346 TCGGCCCTCCTCGGGCTTCCCTGTTCTCATGAGCTTCCCATTTGACAACGACGATGGTGA Variant GeneID:505831|CCDC34:XM_002693510:216_cdna 336^443 1 EMBV3_13071 GeneID:505831 15 GENE CCDC34 NULL coiled-coil domain containing 34 EMBV3_16500 AACCATTAACTGAAGATGTCGAGCAAGACAGCCAGTACCAACAACATTGCCCAGGCACGG Gene GeneID:286850|GNG12:NM_174785:16_cdna Constitutive 0 NULL GeneID:286850 3 GENE GNG12 NULL guanine nucleotide binding protein (G protein), gamma 12 EMBV3_06073 AGCGCTGAGGACATTGGGCAAGCTAGAGGAGGAGCACATGGTGATAGTTATAGTGAGAGA Gene GeneID:508868|RBM15B:XM_002697027:458_cdna Constitutive 0 NULL GeneID:508868 22 GENE RBM15B NULL RNA binding motif protein 15B EMBV3_41646 CTCAACTCCTCTCACCACCTCAACCCCACTCGGCCCCACACACCACCATGACCGTCTCCT Gene GeneID:787225|LOC787225:NM_001099398:249_cdna Constitutive 0 NULL GeneID:787225 19 GENE LOC787225 NULL similar to Keratin associated protein-like EMBV3_34527 TGCCCCCAGACCTCAAAGACCTTGGCGACCGGCATATGCAGCAGTGCTGTGGCAACAAGC Variant GeneID:783805|ACN9:NM_001080352:74_cdna 99^174 1 EMBV3_27377 GeneID:783805 4 GENE ACN9 MGC143009 ACN9 homolog (S. cerevisiae) EMBV3_34718 GGCAAGCTGCATGTCCAGAATAGGGACTGGATAAGGAAACAGGCACAGAGAGCTGTGGAT Gene GeneID:505641|POLR3GL:NM_001075213:53_cdna UTR3_Alt 2 NULL GeneID:505641 3 GENE POLR3GL NULL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like EMBV3_16470 GTGTCCCGGTAATGCCAGTGAGATGGTATTGTAATAGAGCTGCATGGATAAAACCTGGCT Gene GeneID:530104|SPAG1:XM_002692798:96_cdna Constitutive 0 NULL GeneID:530104 14 GENE SPAG1 NULL sperm associated antigen 1 EMBV3_15715 TCGAGAACTACAGCAACCTGGTGTCCCTGGACTGGGTGATTACACCTATGAATAAGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28543 TTCCTGGTGGCAAGAAACTGGAGACAAGCAAAAGGCCTCCATCTGGAACCTCCACTACCT Gene GeneID:530846|ANKS6:XM_002689736:103_cdna Constitutive 0 NULL GeneID:530846 8 GENE ANKS6 NULL ankyrin repeat and sterile alpha motif domain containing 6 EMBV3_13968 CCCCCCAGGATCTGCCGTTGGATTCCCAGGAGCCGGACTCTCTTTCATCCTATATATTTA Gene GeneID:533873|DHODH:NM_001015650:354_cdna Constitutive 0 NULL GeneID:533873 18 GENE DHODH MGC142832 dihydroorotate dehydrogenase EMBV3_43019 GCTACCATGACTGGGGGGCCATGAATGCCAAAGTGGGCTCCTTGAGAAGAGTCATAGATA Gene GeneID:281723|CRYGD:NM_174291:14_cdna Constitutive 0 NULL GeneID:281723 2 GENE CRYGD NULL crystallin, gamma D EMBV3_25877 AACGTTTAACCCCTAGCCCAGACAGGTCCCTGAAGTCCCAACACCACAGGGCCAAATGTG Gene BVT0102_152669 - 1 EMBV3_16644 GK000018.2:55579280-55584938 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084179 1 XLOC_051482 Coding TCONS_00084179 XLOC_051482 Coding Coding GRWD1 18:55573213-55584859 = TSS63118 7606 1 TCONS_00084179_2 446 0.325138048908756 7 0.347445255474453 0.000356935602032657 0.000371894146608584 0.00039226454226197 0.000376221567610438 0.000255719410029844 8.84324144557004e-06 0.000272069044101635 0.000185873445322586 0.00110997117550744 9.26392344631218e-05 1.6614851470453e-05 1.13968542906216e-05 1.8260524651129e-05 0.000383583069396252 2.75263293958972e-05 9.81091562059099e-05 4.50615481117419e-05 0.000347936713361481 0.000528447279867532 0.00116532123477209 6.11351300868749e-05 8.87526201341291e-05 0.00010644744966611 6.51357570745098e-05 0.00176688501101074 0.000573381960572418 0.000350949061847985 5.78716997614234e-05 0.000222095071581941 0.000450647853882591 NM_001076239.1 GRWD1 Bos taurus glutamate-rich WD repeat containing 1 (GRWD1), mRNA. 0.0 3654 100.00 0.266237181172758 NM_031485.3 GRWD1 Homo sapiens glutamate-rich WD repeat containing 1 (GRWD1), mRNA. 0.0 1911 87.14 0.206941887983171 TCONS_00084179_2 sp|Q1JQD2|GRWD1_BOVIN GRWD1_BOVIN Glutamate-rich WD repeat-containing protein 1; 0.0 919 100.00 0.997757847533632 2 coding 0 0 0 0 -0.0698483098682422 0.643125560947263 0.00424582552395394 0.935311414508017 GAAGATGGCGGCGCTCAAGGGTCGTCGGCGCACGTGTGAACCTGGGGAGTCTATGGAGACCGAATCCCAAGAAACAGGGTCCAAGGGCCAGGCTCAGGTCTATCTACCTGGCCGGGGACCGCCGCTGCGCGAAGGAGAGGAGCTGGTCATGGACGAGGAGGCCTACGTGCTGTACCACCGAGCACAGACTGGCGCCCCCTGTCTCAGCTTCGACATAGTCCGGGATCACCTGGGAGACAACCGGACTGAGCTTCCTCTTACTCTTTACCTGTGTGCTGGGACGCAGGCCGAGAGCTCCCAAAGCAACAGATTGATGATGCTTCGGATGCACAATCTGCATGGGACAAAGCCCCCACCACCCGAGGGCAGCGACGACGAGGAGGAGGAGGATGACGAAGAGGATGAAGAAGAGCGGAAGCCTCAGCTGGAGCTGGCTATGGTGCCCCACTATGGAGGCATCAACAGAGTTCGGGTGTCGTGGCTGGGTGAGGAGCCGGTGGCTGGGGTGTGGTCAGAGAAGGGCCAGGTGGAAGTGTTTGCGCTGCGGCGACTCCTGCAAGTGGTGGATGACCCCCAAGCCCTGGCCACCTTCCTCCGGGATGAGCAGACCCGTATGAAGCCCATCTTCGCCTTCTCTGGCCACATGGGCGAGGGCTTTGCCCTCGACTGGTCCCCTCGCGTGCCCGGGCGCCTGCTGACCGGTGACTGTCAGAAGAACATCCACCTCTGGACACCAACGGACGGGGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTCCGTGGAGGACCTGCAGTGGTCCCCAACCGAGGACACAGTGTTTGCCTCCTGCTCAGCTGACGCCTCCATCCGCATCTGGGACATCCGGGCAGCCCCCAGCAAGGCCTGCATGCTCACCACCGCCACTGCCCACGACGGGGACGTCAACGTCATCAACTGGAGCCACCGGGAGCCCTTCCTGCTCAGCGGCGGGGACGATGGAGCCCTCAAGGTCTGGGACCTGCGGCAGTTCAAGTCTGGCTCCCCAGTGGCCACCTTCAAGCAGCACGTGGCCCCCGTGACCTCCGTCGAGTGGCACCCCCAGGACAGTGGGGTCTTTGCAGCCTCGGGTGCAGACAACCAGATTACACAGTGGGACCTGGCCGTGGAGCGGGACCCCGAGGCCGGTGACGCAGAGACGGACCCGGGGCTGGCAGACCTCCCCCAGCAGCTGCTGTTCGTGCACCAGGGCGAAACAGACCTGAAGGAGCTGCACTGGCACCCGCAGTGCCCCGGGGTGCTGGTCAGCACCGCCCTGTCGGGCTTCACTGTCTTCCGCACCATCAGCGTCTGAGCTTGGTCTGGCCGAGTCTGTCTGGTCCTCCACTTACTTGGAACTGAAGTTGAAGTTCATCGTTTCCCTGGAAGGGACTCATTCAGATCTGCTGGCCAGCGCCTCTCCAAAAGGACTTGGTTTGGCCTTTGGCCACCATGATGGATTCTGTTTGACTTACTGTTCTTTGCAAGGACTTGGTTTGGTCCAGTGCCCCTCTTGCTAAGAGAGGCGGTTTGACTCATGGCTCTAAAAATAAGACTCGGTTTGCTCCCCTTGATTCCTCCAGCCGAAGCACTTGGGTTGACCCATGGCCCTGTAAAACCACTGCAGTTGCCTCCAGTGAACCCTCCGACCCAAAGACTTGGGTCAACCCAGTGAGCCCCACCTGTCAGAAGAGTCCATGAGCCCATTTCCCAGATGGGCCTGGTGTGGCCTGTGTTGCTGTGGGTATTTTGTCAGCTGCAGGCCCTAGGCTTGACTCTTTGATCTCTCTGCCACTGGTCTCCCTCAGGGAACTCAAGTGCCTTAGAGTGGCTGGACCAAATTTGAGGTGTGGGTTCCTCCAGCAGAATTTGGTGTGGCCCTTGTCTTTCTGCCAGCTGGGTTTGACTGGGTGGAGCCTTCTCCCCTCCCAGAGACAGGCATTGTGCAGGGGGGAATTCAGGAGCTCTTGAGGGGCAATAAAGAACCAGAATAGAGCCCGAATTGTGGAGGCTGGTCCTTCTGGCAGCAGTCTCATAAGGAAACGAGGAGGAGGGAGGGTTTGGCACCTGGCTGTCCTTGGACTGCTGGGTCCAGCCCTCAGCCCATTGGCGCTCTCTGGTTCTGCCTCTCCTAAATTTTATTCCATCTGGAATGCACCCCAGGTCTCTTGGTGGGGAAGAGTCATCTCATGTGTACCCCCGCATGCTGAGACTTCATCTCAGGGGGAACCAGGGAGCCCCTGTCTCTCATCCTTCCGCCCCTGCCCTCGTCATCACTTTCTCCCCATTTCTTTGTTCCCTCGACTGTGTCCCCATCTTTCCGCATCTCCTGGCCCCCAGGCTCTGTCTCCGCGCCCCCTCCCCCCGTGTCTCTCCTCCGCCACCGCTGTCTCCTCTCCAGCCTGCTTGGGCCGCAGCCCAGCCGTCCTGCCTGGCCATCCTCCCTGGCTCCCCCTCTGCGGCTCTGAGCTGGCCCCACCCCCTGCCCCCCCTCTCGGGCTAGGACTCCTCTGATCCGCCCGTGAGCACAGAGGTCGGGGGCCCGGGACGGGCCGCAGCACCCACAGAGGCCTTTCCTTGGCCCGAGCAGAGGAGCCCCCAGCAGAGGGCATGGGGGTGGGCTGCCCCACCAGGTATGTGCCTCCACGCAGACACCCTGGGCAGGGGTCCTGGCTTTGAGAGCTGGCCCCCGCTTCCCCGCACCATCTTCCTCGCTCAGACGTCTGCCCCAGCGCCCCCACCCTATCCTCCTGGGTCCTCATCCCCCAGATCTGGTGCCCCCAGCTCAGCCCATCTCCATTTTCGGCCTTATTTTCACTGCCTGCCCCCCACCCTCATCCTGCGTCTCTTCTTGTCCCATCTTCATCTCCCATCTGGTCCGTCTCTCCTTTTCCTAAGATGGGATCTCTGCTTGTCTTTGCCCGGTTGCTCCTAGTTCCGCCTGCCTCTTTTCTGTCTCCCATTCTGTCCTCTTGGGTGCCTGTGGCGGTGGGGAGGTCCTCTGTCCTTTCCTCAGGACAGCCTCTCCCTGCGCATCTCTTACCCTCTGTACTCTGGTCTGTCTGCAGTCTCCACGCTACACCCCCTCCTGGCAGTTTCTGCCCTCCAACCTGCTGTTGCTCAGGCCCCACTGGGGAGTGGGGGGAGGGTCGTGGGGGGAACAGCCAGGGTCTCACGGAGCATGTGAAAATGCTTCTATGGCGGGGGGCAGGGGGGCAGCCCCTGGGCGGGGCTTCTCAGCCTCAGATTAGACAGTGACTTTGAAACGAAGTTGACGCACCTTAAGCCCCATGTCGCCTTTATATGGAAACATTAAGCTGCTCTCCCAGGTCAGGAAGAGGCGGGGGGAGGGCTTGAGGCTCTGGATCCGCTTCCCTCGGATCCTGCTGTCGGTGATGGGAGGTGCGTGGGCCCCGAGGCAGAACCCCATCCCAGCTCTCAGGGCCATGCTGGATGCTGACGGGACCCCGCAGAGGTGAAAGGCGTCCCCACCCCCACCCCCAGCCTGCCTCTTGAAATGGACAAGATCACGTCTGTCTCTCAGGGCTGAGGGTAACAACGGGAGGATTTAGGAAAACGAGATCCTGGGTTGGAAAGGCTCAGGACTCAAACCGGCAGCCCACCCCCAGCACTTCATGACTCTGGCCGGATCTCTGAGTCCGCTCCCCAACCTGTGAAGCGGGGTGATGATCTTGACTTCCCAGCATCCTGAGCAGCCAAGGTGAGCCCAGAGGGTGGGCTGCAGAATTCTGGGAGCTTGGCAAGGCTGGGGACCAAGGTGCTCAGGAAACAAGGGCGAGTGATGAGGTGGTCTGTGGTCCAGTCTGGCGCTCAGGCTTGGGCACCAGGAAGGCTGGATGGGAGTCCAGGGTCTGCCGTTTCTTGACTGAGAGCTGGGACAGGAGACGAACCTCAGTGCCTCCGTTTGCTTTCCCATCAGAAGCAGAATCCCAACACCCATCGGTGTGGGTGTGAGGAGGCCCCCACCCATCACCCCCCTCCTGCATCATGTCATCAGGTGGCCTCTGAAAGGGGACTAGTGGGTAGTGAGGACTCTGAGCAAGAGGGGGCTGCAAATGGTAACATTTGCCTGTATTCTAACCTCAGACCTGCCCCCTTCGACAGACTCAGTTGCCGCTGCTTGGAAGAACAGTCTCTAATGCCCAGAAAGTTGAGGGTGTGAAAAGAGTTGGGGCACATCGTGGGCTGTGCACACAACCAGGTCTGCTGACTGGAGCCTCAGCTTTGCCTGTGTAGAGTGGGCCTAAGAAATGCCCATGTTGGGGGTGGAGACTGGGTGGTCACAGACAGCAGTGCAGAGCAGCGGGGCAGGGGAGTAGGTACATGTCAGTGTTGAACTTGACAGCAACTAACAACTCATTCTTCATGGAGAAAGTGCCCCCAGCAACCAGGCAAAGACAAGTAGAGATCCTTGTCGGGAGGCCCATAAGCACCCTAGAGCCTGGCACAGGGAGTTCATTGTACCTAGGTGCTTGGTAGGTGTTGATGGAACTGGGATGCAAAACGTTTAACCCCTAGCCCAGACAGGTCCCTGAAGTCCCAACACCACAGGGCCAAATGTGCAGCTGCTGGAGGGCAATGCGGTCTACAGGTCCAGGCGGGCCCCTTCCCTCCTCTGCGTCCCCCTGGTTCAGCTAAGATTCCCTCACATTTCTCAGATAAGGGAACTGAAGCTCAGGAAGAAATGTGACTTGCCACCATTCATATAGCTTGTAAGTGCCTGAGCTGGGATTCAGCCTAGAACTGCCTGATTCAAAAGCCCAAGTTCTTTCTTCTGGATTCCTTTTTAAGGATTTTTTTTTTTTTTTAATCCCCATTCCACAGATGAGCAACCTCAGGCTCCCAAAATTGAAGCAGGTGGTCCCAGGGCACATACTGGGTCAGCAACTGAGCCAGGATGGGAACCTGGGTCTATATAACTTGATCCTGACCTTGATAAAATCCAACATCCCCATTTTACAGCTGAGGAAACAGATTAGAAAGGTTTCCCCATGATCTGAAAGTCAGGGCTGAGCCTGGGTTTTATTGTGCTTGTTTTTCATAACAGTTTCATTGAAGTGTAATCCACATACCATACAATTCACACATTAAAGTGTACGATTGGGTGGTTTTTAGTATATTCAGAGTTGTGCGACCATGTTATTCAGTTGCCAAGTCGTGTCCAACTCTTTGAGACCCCATGGACTGCAGCGTGCTGCGTGGTGTGTACCCATCATTGCTATCTATTTTAGAACATTGTCATCACCCCAATAAGAAATCCCATTCCTCTGGCTATTGCTTCCCAATTGCCCCATCTCTCCAGTCCCGTACACCACTAGTCTAATTTCTCAGCTTAACAGATTTGCCCGTGCTGGGTATTTCATTTAAGTGGAAATAGGGGTCGCTGAGAGTCAGACACAACTGAGCGACTTCACTTTCATTTATCACTTTCATGCGTTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGTGGAGCCTGGTGGGCTGCTGTCTATGGGGTCTCACAGAGTCGGACACGACTGAAGCGACTTAGCAATAGTAGCATACAATATATGGTCTTTAGTGACTAGCTTCTTTCACTTCACATGGTGTTTTCAGGGTTCATCCACATTGTAACATCTATCACTTTTTTGTCTTTTAGTTACTGGGTAGTAGTCTATTGTGTGGACAGACCACATTTTATTCATTCATTCATCAATTGATGGATATTTGGGCTGCTTCCATCTTTTGGCTGTTGTGAATAATGTGGCTGTGAATATCTGTGTACAGTGTGTGGACACTTGTTTTTAATGCCCTTGGGTAGATACTTGTGTGTGGAATTGTAACTCTCCATTTAAGGAACTGCCAGACCATTTTCCACACCAGCTGTGCAATTTTACATTCCACCAGTAACAATAGGAAGGTGCCAGTTTCTCCACATCCTTGGTAACACTTTTCTGTTTTGTTTTTTCTTGTTCTTATAGCCATCCTAAGTGAGTATGAAGTGGTAACTCATTTTGGTTTTGATTTGCATTTCCCGGATGGCATAATGATGTCAATTATCTTTTCCTATGTTTATTGACTATTTGTACAGTTGACCCTTGAACAACATGGGGGTTGGGGGTGCCAACTCTCTCCACAGTCAAAATTCCAAGTATAACGTTATTATTTATTTCTTTTATTTGCTGCATCGGGTCTCAGTTGTGTCATCCAAGATCTCTCCTCGTGGCGCAAGGCCTCCCTAGTTGTGGTGCTTATGCTTGTTGCTCTGCATCATGGGAGATCTTAGTTCCCTGACCAGGGATGGAAGCGGGTCACCTGCACTGCAATGCAGATTTTCAACTGGACCACCAGGAAAATCCCTGAGTATAAACTAGAGTTGATCCTCTATATCCATGGTTCTGAATCCAAGGATTCAACCGACCACGGAACATGTAGTACGACTCTATGATTTATTTTTAAAAATCTGCGTATAAGTGGAACCATGCAGTTCAAACCCATATTGTTCAAGGGTCAACTATATCTTTTTGGAGAAATGTCTACTCAGATCCTTTGCCCATTTTAAAATTGGGTTGTCTGTTTCTTATTGAGTTATAAGGCCTCTTTATATGTTGTGGATACAAATTTTTTAGATATGATTTGCAAATTTTTTTTCCCATTAGCAGACGGTCTTTTCACTTTCATCTTAGGGTCCTTGGAAGCACAAGAGTTTTTCATTCTGATGAAGTTCAAGTTGTCTGTCGTCTTTTTTTCCTTTTGTCGTTTGTGCGTCCTGACCTATAGGTGACCTTAGAGCCCCGGCTCATCTCTCCAAGCTGACTCCATACAGATCAGCAGTTACCATTCAGTCTTTTTTAAAATTTTTATTGCATTATAGTTGACTCACAATATTGTGTTAGTTTCAGGTATACAGCAAAGTGGTTCAGTTATATATGTATACTTTTTCTGGTTCTTTTCCATTATAGGTTATTACAAGATACTGAATATAGTTCCCTGTGCTATACAGTAGGTCCTTGTTGTTTATCTCTTTTATATATAGTAGTATGTATCTGTTAATCCCAAACTCCAATTTTATCCACTCCCCAACCCTCACCCCATCTCCACTCCTTTCCCTTTTGGTGACTCTAAGTCTGTTTTCTTTGTGACTGCTTAGTCTTTTACTTTATGAGTCTGGACTCTGGATCTGGGCTGCTAGCACTCAAACCCCAGCTTATTCAGCCATGACCTTGGGCAAGTTAAATGTTCTGTACCTGTTTCCTCGTCTGTAAAACGGCGATGATGTTTATGCTGCTGGAGGTTCAAATATCTAAATTCATGTGAAGTGCTCACAACACTGGCTCTAATAACTGAAGTGCTTGTTGTAACACAGTACTGCCACCACTATAGTTGTGTTGTTGTTGTTGTTGCTACACAAATGTTTCCTATAGTATTACCATCAGTGTTGTCGATTCTGTTCTGATCTTCCGCCCATTTGCCAGATGAGGCCACTAAGGCCCAGGAAGTATCCCTGGCCAGTGAGCCCCACCCCTCCCCCATTCCTGGCACTCTTGAC EMBV3_07150 CACAGAGCTACCCTATGTCCTGGGAGTGTCCCCAGTGGAAGCATGAAGTCATCTGTCTTT Gene BVT0102_044279 + 0 NULL GK000002.2:122845667-122889871 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37488 CTAGACGTCCAAATCTCAGCAATCAAGACACATGTTGAGAGGGGTCTGCTTCGATGCCTC Gene BVT0102_073824 + 0 NULL GK000014.2:82819110-83142223 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058179 1 XLOC_035976 NonCoding TCONS_00058179 XLOC_035976 NonCoding NonCoding - 14:83128137-83129061 - TSS43856 924 1 TCONS_00058179_1 105 1 0 5.88990307831971e-05 0 0.000160242409087092 0 0 0 0 0 5.977376154974e-05 0 0 0 0 0 0 0 0 2.71546352079336e-05 0.000108650530193978 0 0 0 0 3.62869579780277e-05 0.000449901223034555 3.04998552869831e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.466591613447391 0.251054572220219 0.00147219438259807 0.979043525214023 GTGGGCTCTGGCCTCTCACAGGGCAGGAATTCCCTAAATGCAGAAAGACACTCAGAGAGTTGGCGTCCGATGAAGTCCACTGCAGAACTGTTACAGGAGCTTCAACCAACTCAGCCACCCACGTGGATGACACTCCCTGGGGAAAAGAGGAGAACTTGAACAAAGCTCAAAGGGGGTGCCCAACTAACTCTGCAACACTTGGGGATTTAGGCAAAAGTGAAAGTTCTCCGTTTCAGCTGGCAGCAGACTGCTGCTCGGTGGGTCTCCTGTTCAGCGGGGCAGGGAGCCCTACGGGAAGTCCTCCAGCTGGCGTCTGTGTGAGAGCTTGGCTCAAGTGGCACCGAGTGTCTCACCTCTGTTCATGGAAAGGCTACTGCGGAGCTGTCGCTACAAGCAGGATTCTGCTGTTGGCAAAGCAGGGACAGCGGCTCACCCAGCCCTGAAGGGAGTAATAACCGAAACAGAGTCCCTGGCGCACAGAAGATGTCTCTCGGGGAGTTTAAGGATGAGCAGAAAAGGGAAAATTGACACGAGACTAGAATTCCTTAAAATGAAGTGGGAGCTTGAAACTAGCAAGACTGGGATATTAGTGTTAAAATCCAACATGTCAGAAACACATGGATCACATATGCAACTGCAGAAACATCTGGCATCTTACTTCTGGGACCAGAGCTCTTAGGAAAAGGAAGAAAGAGCGCTCTGGCTAAGTGGTTTCCTTTTTCCTCCTACAGAGCACGTGAGGCAGCCTTCCTAGAATGCTCTGCCTACATCCTCAGGTTTGTCAAGTTGTTTTCTTCTAGACGTCCAAATCTCAGCAATCAAGACACATGTTGAGAGGGGTCTGCTTCGATGCCTCAGTGGATAACTGCTGCGCCTTCCCCTGCCCCAGCGACTCTGATCATATGACTCATTCTATTGTCTTCA TCONS_00052399 . 5' 10671 TCONS_00052399 . 5' 10671 EMBV3_22926 CTTCCTCCAGCGCTACTACCAAGTGGTCCAGTATCATGTGCATGGACCACCTGGAGGAAA Variant GeneID:531866|TTLL3:NM_001035387:143_cdna 248^443 1 EMBV3_42711 GeneID:531866 22 GENE TTLL3 MGC142578 tubulin tyrosine ligase-like family, member 3 EMBV3_22586 AATGCTGATGAGTCCAACCACGACCCCCAGTTTGAGCCAATAGTTTCTCTTCCCGAGCAA Gene GeneID:100336744|LOC100336744:XM_002694685:265_cdna Constitutive 1 NULL GeneID:100336744 17 GENE LOC100336744 NULL RAN binding protein 1-like EMBV3_35177 GGTGTTTGTTACAGGCAGAATTGGATAGATACAGCCCTACAAAATGTATATGCCCTCCCC Gene GeneID:404110|ZFAND5:NM_001101045:1_cdna Constitutive 2 NULL GeneID:404110 8 GENE ZFAND5 ZNF216 zinc finger, AN1-type domain 5 EMBV3_20249 ATAACCTGGTAAGATTCCATGAAGTAAAGGAGGTGGAATAATTGATGGGATTAGCCACCG Gene GeneID:445417|FZD1:NM_001101048:7_cdna Constitutive 0 NULL GeneID:445417 4 GENE FZD1 NULL frizzled homolog 1 (Drosophila) EMBV3_17491 ACCTGAAGGTCATGTCCCAAACCCAAGTGTTCAGTGGGCAAATGAGGGCATGGACTGAAA Gene GeneID:506459|ACSS2:NM_001105339:898_cdna Constitutive 0 NULL GeneID:506459 13 GENE ACSS2 NULL acyl-CoA synthetase short-chain family member 2 EMBV3_07655 TGATGAGAATTCAGATAAGCTTGCTAATAACACGCAGAAGCATGTGGGATCCATGCTGGC Variant GeneID:100126817|LOC100126817:XM_002688978:10_cdna 87^192 1 EMBV3_14019 GeneID:100126817 7 GENE LOC100126817 MGC148346 hypothetical protein LOC100126817 EMBV3_25318 CCTGGATTTGAGTGGGGGAATGTCTGACAGTAATTGTCCTTGGGACCCTTTGGTTTCCAG Gene BVT0102_006344 + 0 NULL GK000010.2:73076485-73096574 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08665 GCTAGCAACTTTAGGGATGTGTAATATTTTCCAGATGCTCTGATAAGCTCTTGACACGGA Gene BVT0102_223078 - 1 EMBV3_33144 GK000017.2:66828140-66852835 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077943 TCONS_00077945 TCONS_00077944 1 XLOC_047181 NonCoding TCONS_00077943 XLOC_047181 NonCoding NonCoding - 17:66838466-66842680 - TSS58114 1508 2 TCONS_00077943_4 79 0.45026525198939 3 0.642772371231901 0.000201748781560726 1.52871749744119e-08 0 2.86939807825078e-10 0.000464845468359239 5.841550668232e-09 9.28772542841553e-09 3.04729289645809e-10 1.18976467133229e-08 0 0 0 0 0 6.38430996011489e-09 0 0 0 2.59318965962411e-06 9.5288538120563e-05 1.97428808078448e-06 0 0 0 9.01674700847521e-09 1.19092990361339e-08 0.000167067196574483 0 0 0 XM_005198170.1 ASB10 PREDICTED: Bos taurus ankyrin repeat and SOCS box containing 10 (ASB10), transcript variant X5, mRNA. 3e-10 71.6 71.88 0.104774535809019 NR_033894.1 LOC286114 Homo sapiens uncharacterized LOC286114 (LOC286114), non-coding RNA. 6e-31 140 70.75 0.205570291777188 0 noncoding 0 0 0 0 0.00451028017874594 0.972271549173507 0.0194761117721973 0.708498281300897 TAGAAGCCTCTCCAACATTCCATGAGTGTGGCACAAAAGAAAGCCCAGCTCCTGGATTCTGCCAGGGCAAGGAGCAGACCCACTTCCTGCAACAACTCCAAGGCTTACCACTGGATAATAGGAGAATAGAGCACAGGGAGAGGAAAAGAAAAGCTACTGCTTTTCAAGAACCAGGAGGCAGAAGAAGGGGAGGGGGTGCAGGCGAGAGAACTGCCCAGGCACACATGCAGGACCAGGGCAAGTGGAGACATTCCTTCACACGCACTGCGGCAGAGAACCCTCAGGAACTCCGGACTCCCCCATGCTCCCCTGGGACCATCAGACCAAGCCCTACCCTCCACAGGCCCGAAACCACCACAGGAGACAAGCAAGAGGACACTTAACCTCCGGAGCCTGTATGAAGATCGTTTGGACTAAAATGTCAAAACAGAGTTAGATTAGTTTGCTAGAGCCTCTGTAACAAAGTACCACAGATCGTGCAGCTTAAACATGGAAAAACGCTGTCTCACAATTCTGGGGGCTGGAAGTCCAGGATCAAGGTGTCAGCAGGGCTGGTTCCTGCAGAGAGCCTGGAGGGGAGGGTCTTCCCCACGCCTCTCTCCTTGGCTTGCATGTGGCCGATTCCCCCTGTGTCTCTCCATGTCATCTTTTCTCTGTAAGTATCTGTGTTCAAACTTCCCCCTTTCTATGAGGACACCAGTCAAACTGGATCAGGCCCCACCCCGATGACCTGGTTTTAACTTTCTCACCTCTGTGAAAGCTCTGTTCCCAAAGCAGGTCACATTTTAAAGTACTGGGGGTCAGGAGTTCAACACAGGAATGTGGGGGGCACACTTCAAACCACAGCACGGGTAAAACTTAATTGTGCTTTTGTTTTGTTTTCTGCCAGTGCTGGGGGGTGGGAGAAGTTGGAATGGAAGTCGTAAGGAAGACCAGATCAGCTACAGACAAAGCAATTACATTTTCTTCACACACTCAAATTGCAGCAAGCATTCAACGTGCAACCCCAATACATAATTTAAGCAGATTTGTGCAGCCTCCTGAAACAATAGCGTGGATTAGGCACGGCCCCCAGAGATAACAAAGCAAGTTGCAGTCTTGTAGCTCCAGTAAAAGGGGGGAAAAAATGGAATAAAACATTACCACAGTGAGAGCTAGCAACTTTAGGGATGTGTAATATTTTCCAGATGCTCTGATAAGCTCTTGACACGGATGATTTTATCGAATCCTCATGCAACCCTACAAGGCGTGTTTCCTACTCTCCCAGGCTTAGGGATGGGGAAGCCAAGTTTCAGAGAGGAAATGTTATTTGCCCAGTCCACCTGGCCTGATTCCAAAGGGTGTGTGTGTGAATACTGCCCGCTGTACCTGCCTCATTTTCCTGGGCTGGGTGACCTCTTCCTAAAGCTTTAAAGAGCGCTTCCTTCTCCCTCAAGGGAAGGGTTGGGGCAGGGACCCGAAGTGGGGTACTGGTGTGCAGAAGGCTCAGATTAGCCAGATCTGTAGTC TCONS_00076051 r 3' 10328 TCONS_00077946 s 3' 10156 EMBV3_32803 AGGTTGAAGTTCCGACTAATTGGACGCTTCTCAACTAGTCTGGAGGGGGTGTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_19852 TGTTCATAACAGTATCTTTAGCAATTAGAACAATGCCTGGCTCATAGTACCTACACAGGA Gene GeneID:768050|SMAD5:NM_001077107:49_cdna Constitutive 0 NULL GeneID:768050 7 GENE SMAD5 MGC139219 SMAD family member 5 EMBV3_09379 ATCTGGGACTTCCCTAATAGTCCAGTGATTAAGACGCTATGCTTCCACTACAGAGGGCGC Gene GeneID:505728|MRPL53:NM_001045926:2_cdna UTR3_Alt 1 NULL GeneID:505728 11 GENE MRPL53 MGC128710 mitochondrial ribosomal protein L53 EMBV3_24254 CAATGCTGAGTGGCTGTTGGGCTGAAAGCTCCCAGGAGTGCGTTACTCTCCAAAGTATAA Gene GeneID:520456|BTBD8:NM_001105200:147_cdna Constitutive 0 NULL GeneID:520456 3 GENE BTBD8 MGC165805 BTB (POZ) domain containing 8 EMBV3_31748 GGCAACTTTCAAACAAAATAACTTGAGACAAGGTGGGGAGACTGCAGGGCTGGGAACTGG Gene GeneID:535177|BRUNOL4:NM_001099068:103_cdna Constitutive 0 NULL GeneID:535177 24 GENE BRUNOL4 BRUNOL4 MGC165856 bruno-like 4, RNA binding protein (Drosophila) EMBV3_12480 GGAAGGCTGGCTTCTTCAAAAGACAGTACCAATCTATCCTACAAAAAGAAAACAGAAGAG Gene GeneID:282882|ITGA4:NM_174748:11_cdna Constitutive 0 NULL GeneID:282882 2 GENE ITGA4 NULL integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) EMBV3_35538 TTCTTCTGCACCGCACCCGGCGTCTACTTCCTGAGCCTCAACGTGCACACCTGGAACTAC Gene GeneID:524646|C1QTNF8:XM_002697908:525_cdna Constitutive 0 NULL GeneID:524646 25 GENE C1QTNF8 NULL C1q and tumor necrosis factor related protein 8 EMBV3_29279 AAATAAGAAGTCGATCCAACCGGAGAGGGACAAATGACTTCAAAGCTCCTGCGCTTGGGA Gene BVT0102_080741 - 1 EMBV3_08830 GK000016.2:63691627-64095721 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067958 1 XLOC_041567 Coding TCONS_00067958 XLOC_041567 NonCoding Coding CACNA1E 16:64094629-64095804 o TSS50979 1175 1 TCONS_00067958_2 59 1 0 0.00311367855476002 0.000551635990813284 0.000792315666064089 0.000942802020891195 0.00231473023147828 0.000181995665789852 9.90404096130255e-05 0.000581856273730664 0.000255806366953218 8.40493757681517e-06 3.89649510247058e-06 0 2.19774869643696e-05 0.00100827469048637 0.000881030579405917 0 0 0 0.00163683168420301 0.000845991861787691 0.000157185631532778 0 0 0 0.00129972886847991 0.00111873600271242 0.0048779970092224 0 7.38744664130862e-05 9.84984736481493e-05 XM_005217268.1 CACNA1E PREDICTED: Bos taurus calcium channel, voltage-dependent, R type, alpha 1E subunit (CACNA1E), transcript variant X1, mRNA. 8e-35 152 100.00 0.0706382978723404 XM_005245477.1 CACNA1E PREDICTED: Homo sapiens calcium channel, voltage-dependent, R type, alpha 1E subunit (CACNA1E), transcript variant X1, mRNA. 0.0 688 88.70 0.422978723404255 0 noncoding 0 0 0 0 -0.0185379828613654 0.865425124673148 -0.00945589465297687 0.856078925358699 TCTCCCCCTCCTCGCCTTTCCCGGTCTCCCCGTTCCCTATCTTCTTCTCTGCTCCATCGAGGGGAGAGCTGCCGGGGTGGAAGAGGAAGACCGAGTCATCAGTGAGCAAGTTCGGTCCCTGGACAACTCGCGTGCCAGGCCACCGCTGGGCTCGGCTGCAACCTGTTCCTCCCTCGCCCAAGAGCTCTCCCGCCCGCCCGCTCGCTCCCGCCCTCTCCCCGGCGCAGCCGCGGATCGCTGTTGCATGCTGATCCGGGGAGGCGGCGGCGGCGGCGGCGGCGAGCGCTCCGGGAGGATGCTGGCACTCGGGCTTCGCCGCTCTCTGGATGCTTTTCAACTTCTCTCCCAAGCGCAGGAGCTTTGAAGTCATTTGTCCCTCTCCGGTTGGATCGACTTCTTATTTTGATATTTTGGGCGTTGCGGTTTATGCAGGAACCTCAATACAGCTCTCCTCCCTCCCTCCCTGTCTCCTCCACCTTTGGATGCGTCTGTGCTGGCAGGTTTAAAGACCCAAGTCTTGGTTGTGGAATTTCTTAGATGGACTTGCAGGGGCCGGCGTTATAAAGCATGTCACCGTAACCTTGTCCTTGTCTTTTTTTTTTTTGAAAAGTTCTTTTGTTTTCATTTTTCCCCTCCCCCCACCATCAATAAATTACCAAACTGTTACCTAGCGGGCCGGTGCCTGCCTCTCTCCCAGAACTAGGTGGTGCGTCTGCCAGAAGAGGAGCTATGTTTGAAGAGCAGCCTACTCCACCCCTCTTCTCTCCAGTCCCTGAACGCCACCACACACTGGCATTTTGAAAAAAAAAAAAAATTGTCTCCAGAAACGGAGCACCCCCAAGCTCTCCCCCCCCTTTTTTTTCCTCCTTGAGGAATGGAGCTTCGCAGAGGTTGCATTTAGATTCAACAGTTCAGAGCGGCGGGGTTGCTGCTGCCGCCTCTCCGAAGAGCTCGCGAGGCTCCCCGGAGGCGGTGGTCCCCGTGCCCGTCTGGATGCGGCTCTGAGACTCCGTGTGTCTTTCTGCTTGTTGCTGTGTGCGGGTGTTCGGCCACGATCACCTTTGTGTGTCTTCTGTCTGTTTAAACTTCAGGATGGCTCGCTTCGGGGAGGCGGTGGTCGGCAGGCCGGGGTCGGGCGATGGAGACTCGGACCAGAGCAGGAACCGGCAAGGAAC TCONS_00067964 s 5' 0 TCONS_00067964 s 5' 0 EMBV3_39130 TGGCAGGGTAGAGAAGGAACATCTCCCACTGTGTTTCATTAACTGTTGCCTTGGGCCGCA Gene GeneID:524639|PHOSPHO1:XM_002695905:246_cdna Constitutive 2 NULL GeneID:524639 19 GENE PHOSPHO1 NULL phosphatase, orphan 1 EMBV3_26029 CCATAGAGTTTTTAACAGAAGGTAATGAGCTTCTTCTGAGGGCCATTAGTAGCACTGTAC Gene GeneID:615641|C21H14orf147:XM_002696705:96_cdna Constitutive 0 NULL GeneID:615641 21 GENE C21H14orf147 C14orf147 chromosome 14 open reading frame 147 ortholog EMBV3_11206 CTTCTCTTGTGGGGCTGACAATGGCCTAGGGATACAGCACAGTGAGATGGTGATACTAAG Gene GeneID:515085|FCRL3:XM_002685955:24_cdna Constitutive 0 NULL GeneID:515085 3 GENE FCRL3 NULL Fc receptor-like 3 EMBV3_16866 GGAGATGGAAGGTCCCTGCAATTATCCTTTACCACAAAGTAACTCGCACAGGACAAGGAG Gene BVV0101_021359 + 0 NULL GK000003.2:33478300-33482958 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13665 CATACTGGACCCGGAGCCGAAGGAAAACAGGTTATTAAACCCGAATCTTGTGTACCATGT Variant GeneID:514618|RACGAP1:XM_002687278:158_cdna 749^879 1 EMBV3_05403 GeneID:514618 5 GENE RACGAP1 NULL Rac GTPase activating protein 1 EMBV3_34272 CTGGCGTCCAGCTCTGTCTGTTTCCCCCTTCAGTATGATTTAATTGTTTCCAACACAGAG Gene BVT0102_022204 + 0 NULL GK000004.2:32269540-32356964 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186758 1 XLOC_112810 NonCoding TCONS_00186758 XLOC_112810 NonCoding NonCoding - 4:32326599-32331061 - TSS139126 4462 3 TCONS_00186758_2 147 0.701030927835051 1 0 2.17802703406045e-07 1.13851227653579e-06 1.07401434980025e-06 0 1.58070152828171e-07 0 0 8.83717259723659e-08 1.76829656309378e-06 5.05885358702503e-05 1.15576414013788e-05 0.000360286040549193 1.29730067995652e-05 0.000135732432586749 3.84138216340848e-06 4.49931688603623e-05 0.000289665640893818 0.00019195819039454 6.16871350533988e-07 2.68805334392137e-06 3.4017571163588e-07 0.000125181315226534 0.000127151402609162 0.000239967670053065 1.6939356554138e-06 4.62533694914066e-07 2.08554184463041e-07 0.000137978042293247 0.000169212722772561 4.82343656631883e-05 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 0.0 850 93.45 0.124831913939937 0 noncoding 0 0 0 0 -0.5722063257355 0.096289434855765 0.344670479128188 0.00359310630934064 TAAGAATAATTATTCTTTAAGAATATCTGTCTAAAATAGTCTCTCCAGATTGACGTAACTTGAATTTCTAAGGGTTGTGCTAAGTGTGCTAAGTGTTAGAAGTCTATTGAATAGTTAGGTGATTTCCAAATAAAATAAGGTTTTGAAATACTTACTGCTAAACACTAATTTCCTTTTACAGAGAAACGAAGAGATATGGGACTATAAGTGAATAATGTTTGGTGCCATCCTAAAATGTTCTAAGAAAGAAAGGGTTTTAGAAATTATCACTGGTATTTATGCTCACCAATCTATAAAATGCTAATATAAAAGTTAGTTCTTGGTTGCTAAAGGAAAGTAGGAAGTGTGTTTTCAGTTTAAAAAAAAGATATGAAAAATCCTAAAAAGAGTTATGTATGATCAGGATTTTCTAAAATTGGATTACAATTAGTTAGATAAATGGATTTTGTTAGGAATGACACAGCCATAAGAAAACTGGTTAGAGCCAATTAGGTCCAAGATGGCGGAGCTGACTTTCACTAAACCTTGAGCCTTGGTATTTATGCCCATTGTCACATATCAACAAGCTAAATGATACACCCATCAACGTTGACTAAATCTGACCAAATGTTCTAAACCCTTTTAATTGATCTTTTTGATAAAACTTCCTAAATCAAATTCTTTTGAAGCTCTTTTGACCTCTAGCTAACTTTGGGGTGCTCCGGAGGGCCCCTGAAACATCCCAAAGAGAGATATTAAACTGTGTTTATTTGGTTGGTTAAATTACATGAAAAAGATTATCAAATGAGTAATAAATCTGCTCATGTTATAATGTATCGTAAAATTACTAATACAGATATCCTAGAAATTATACGGAGTTCTTAACATTCTGATATGTACTGGTATTCTAATGGAAAACATGATGACTTCACAAAAGTTAACAAAAGGACTGAATGAACCAGAAAATATGCTTATAACTTTTATGGTTTCTGTCTGAAAAATTATGGGTTTGAATCTTATGTTTTCCAGGAGTACGAAAAACCTTCCTCTCAAACTAATTATGACAATACTTTGGTAAAATTATATATTATAAACAAAACAATTATATTTTCTCTCTGATTCCTCCAGAAGTTGGAAACTCTTAGGTTTCCAGTATGTTTATCAAATGAATTAGGAAGGTTATCTCGCTAACAGGTACAAAAATCTCAAAGAATTTTTGAGACCTTAAAAAGGAAAGAATTCACTTAGATTTGTTAGGCAAAATCTGTGATAAGCCTTTGGTGTGAGCTTCCCAGCCCTGTTTTATTTTAAAAGTTCAGTCTGAGACTCTATAAATGTTTCAGCAAAATAAAAAGTCTATAATCAATTATGGTTATGTCATGCAAGTGTATGTTCCTCAGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGACAGACATTAAAGCCCTCAGGGCGTCGCAGCTCTTGAGTCGTGGACAAACCATGCTACAGCTCTTAGGCAAATCAGTGTTCAGTTCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCACCGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCTTCCTCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTGGCATCATTCCTTCCAAAGAAATCCCAGGGCTGGTCTTCAGAATGGACTGGTTGGGTCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAGGCATCAATTCTTCGCCGCTCAGCTTTCTTCACAGTCCAACGCTCGCATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGACATAACTTTCCTGCCAAGGAGTAAGCGTCTTTTAATTGGCTGTAGTCACCATCTGCAGTGATTACAGCTCTATTTTATTTAGAAGATAGCAGGTGAATCCATCCTCCAAGCGTGAGGGCATGTCAACCCAAAGACTCGAAGAGAAGAAGAGAGAGAGTGCGTGCTTTGGCTCCTCCTTTTATGTTTTTTTCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAGTGCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTCGGACCTTCCTCTGACCTTCCTTGTCTTTTAGCCACCACCATTTTGGACTCCTTTTCCCTAGTCTACCTACCTAACAGTTATATAAATCATCAGACCAAAATTAGTGAGAACAGACCTATTTTGCAAACAAACTAGCCTTAATTTGGTTATATTTGATAAAAATGAGGGTAATTTTAGGGAGAAAAAGATGTTTCAATAAATGCTAAATCCCAATTTGTTAATGGAGGTCTGCATGTAGTAAGACTCATTTCATCAGGAGAAAACTACACTACACCAGGATGAGAAGATGACATCCGAGGTAGACAGCTTGCCCAAGATGCTGGACCTGATTCGTATGATCACTTATAATGTTTTCTTGACTTCTTAGACCTTTGCATATAAATCAAATGCTTTTCTATCATAGGCCTGATCCTATGCTAGTTTTAGCAATCAATCCAATTGTTGGGTTTGTGGGCAATTACCTGTGTCTAGTTCTAGGTTACGTTGGTAAATTTCTCTACTACAAGACTCTAACTGGTTGGCCCTGAAAAAATTTACTTAAAAAAAAATTATAGTCATATTCAGATCACTGTGATATTACTAGATGAGATCCCCTCACCAGGCCAATTAATAATGCCTGCTCTGACTCTGGCCATAAATTTGAGTTTTTTTCTATTACTCAAGCTCAATCAGAGCAACAATAAAAGTTTCAACAAAGGAAAAAAAAAATCTCCCACAATTATGAGATGGATTTATATAGATAACACCAGGCTATGGTAATTTAGGTTAAAGTCTCCTCTGTGTTGGAAACAATTAAATCATACTGAAGGAGGAAACAGACAGAGCTGGACGCCAGCTTAGGCCAGGCTGCGAACATTAGGTTACACGCATGGTCACCCGGTGTCTATAGAAATGGCATACCAATGGAAAACCAGACCCCCAGATAAAAGAGCCTCAGGACTTGTACTTGGATTCTCTGTTGCCTAAAAGAATATGCTAACTAGTTCTGTAACAGAACAAAGTGGTAAATTCCATTATGGTTATCGGGATACGACCACAGGCCTATTGATAAATATCCACTGTTTATCTAGTCTTGTGACACATGAATCATGGGTTAACTTTGATCATATCTTTCTTTTACCTTGTCCAGACTAGTTTCAAGGAATTTGGGGAGATGGGTTTGAGCAAGTACACTTAGGGTATACAAGGTTTTCACAAAAACTGCTCGGGGTCCTTGGCTAAGAGGAGGCTCTGCCTTGGGCCCCGCGGTGTAATAAACTGCACTCCACTATCTGACTGTCCTTCTGAATGAGTTTGTTTCCCGGAACGCGTGGCTACAACAATACTAAAGATATTCAGTTCAGTTCAGTTCAGTCACTCAGTCGTGTCTGACTCTTTGCAACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCATCCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTTCTCCTGCCCCCAATCCCTCCCAGCATCAGCGTCTTTTCCAATGAGTAAACTCTTCTCATGAGGTGGCCTAGTAACACTAAATAACTGGGCTATGTGCCTTATAGACGGTGGTGCCAATATATAATTTCCCTGAAAGATAAAGATTCTACAGAGTAGACTAAGTCAGGTGACCTGAGGTATACTGGGCTACATCTAATGAAAGCTCTTAAGTCTTACTTGTGACTTTACTAATATTTCTGGCTATGTTATTTATATTTCACCTGTTTTACAAAATTGCTGTTTCTTACACTGCCAAATGTGTTCTGAGGCCTCTAAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCTAAGAAAGGCAATGCCAAAGAATGCTCAAACTACCACACAATTGCACTCATCTCACACGCTAGTAAAGTACTGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATGTGTGAACCGTGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAAAATCCGCTGGATCATGGAAAAAGCAAGAGAGTTCCAGAAAAACATCTATTTCTGCTTTACTGACTATGTCAAAGCCTTTGACTGTGTGGATCACAATAAACTGTGGAAAATTCTGAAAGAGATGGGAATACCAGACCA TCONS_00181192 . 5' 25649 TCONS_00181192 . 5' 25649 EMBV3_17816 AAGAAAGAAATCAAGAGAGGAAGGAAGTTGCCTGCTTTTCAGGAGTGAAAAGAAAAAGAG Variant GeneID:513331|PHF11:NM_001046144:97_cdna 532^772 2 EMBV3_05783 GeneID:513331 12 GENE PHF11 MGC137849 PHD finger protein 11 EMBV3_36663 CTCATGGTGCCCAAGGTGCAATTTATGACTCCAGAGGGAAATCAGAACACTTCCGAATCC Gene GeneID:282572|KCNJ8:NM_001040482:13_cdna Constitutive 0 NULL GeneID:282572 5 GENE KCNJ8 MGC137639 potassium inwardly-rectifying channel, subfamily J, member 8 EMBV3_36348 ACCCTAAGGCTCAACCTGGTGACAACTCTACTAGAAGCCCGATCCTAACAGAGCTCTACA Gene GeneID:615662|C6H4orf22:NM_001076389:10_cdna Constitutive 0 NULL GeneID:615662 6 GENE C6H4orf22 C4orf22 chromosome 4 open reading frame 22 ortholog EMBV3_15899 GCCTGGCGTCATGCCCCCTCTGCTGTTTCCCAATAAGCAAAAAGGTAAAGTGACAGCGTT Gene BVV0102_142856 + 0 NULL GK000010.2:72217437-72298913 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017784 1 XLOC_009110 Coding TCONS_00017784 XLOC_009110 Coding Coding - 10:72222709-72363788 - TSS12086 2590 1 TCONS_00017784_2 549 3 0.981662626348545 0.000434428961565704 0.000673539693433327 0.00036178009552864 0.000267039518355962 0.000139611562996855 0.000214623929048885 0.000357009407730116 0.000357305759552054 0.000213146249219292 0.0003608792148626 6.37125942205125e-06 3.36715532100682e-05 4.46882441408591e-05 0.000276149899487249 5.04629836300073e-05 0.000384965202898937 1.46284449306033e-05 0.000296250469377638 0.000269925189802983 0.00150112656720887 8.71709760230085e-05 0.000635813775103312 0.000248080037857049 8.48562893149469e-05 0.000619169971590707 0.000139942776873492 0.000396055247773333 7.28176599361305e-05 1.85589575073504e-05 0.000102652064739958 XM_005192427.1 RTN1 PREDICTED: Bos taurus reticulon 1 (RTN1), transcript variant X1, 0.0 3039 99.94 0.651351351351351 NM_021136.2 RTN1 Homo sapiens reticulon 1 (RTN1), transcript variant 1, mRNA. 0.0 1876 84.72 0.651351351351351 TCONS_00017784_2 sp|Q16799|RTN1_HUMAN RTN1_HUMAN Reticulon-1; 0.0 788 82.52 0.936247723132969 0 coding GGGGGAGGACGAAGCGGTGACGCCGAAAGGAGCCAAGCCGGAGACGCTGGCGGGGGAGCCGGGACCGGGGTTGGGCGCCGGGGTCGCCGAAGCTGCGCCGCGGGAACTGGGCTCGGGCCCCGCCCGGCCGCCGCCCGTTGCCATGGAAACTGCATCCACAGGTGCATCGGATGTCTCCAGGGCCATGGATCATACCTTTTCAACAGTGGCAAAGGATGGGGAAGGAGTGTGTTATACGTCTCTGATTTCTGACGTCTATTATCCACCTCGGGAGGATGCTACGTATTTCACTGGAATTCTTCAGAAAGAAAACGGCCACATTGCTGCTTCAGAGAGCCCTGAGGAGTTGCGTCCCCCTGGACCCTCCTTACCAGATGTGCCTGGGACGGAGCCTCGTGGCTTATTTAGTTCTGATTCTGGAATAGAAATGACTCCGGCAGAGTCCGCTGAAGTGAACAAGATCTTAGCAGACCCCCTGGACCAGATGAAAGCAGAGGCCTATAAATACATTGACATAACTAGGCCAGAGGAAGTGAAATATCAGGAGCAATGTCACCCCAAGTTGGAAGAGAAAGACTTGGACTTTAAGAATAAGGACACTGAAATCTCAATAAGGTCTGAAGAGACCCGTGAGGCTGAGAAACCAATTCCCGTGGAGGGGAAAATCCTCAAGGACCATTTATTTGAAGAATCAACCTTTGCGCCGTATGTAGACAATATCTCTGAAGAACAGCGCAGTGCCCCTCTGATGGCTGCCCCTGTCAAGATCACGCTGACTGAGATCGAGCCTTCTATTGAAACTGCTACCCCAGAGAAGACCCCCGAGAAGCAAGATATCTGCCTGAAACCGAGTCCTGACACAGTCCCCACAGTCACCGTCTCAGAGCCTGAAGACGACAGCCCAGGATCCGTCACTCCTCCGTCTTCTGGAACAGAACCGTCTGCTGCAGAATCCCAGGGGAAATGCGGCATCTCCGAGGATGAGCTGATCACTGCCATTAAGGAAGCAAAGGGGTTATCCTACGAGACAACGGAGAGCCCACGGCCAGCGGGCCAGAGGGCCGAGAGGCCCGAGGCCAAGGCCAGGTCTGGGCTGCCCACCATCCCCAGTCCCCTGGACCACGAGGCCAGCAGCGCGGAGTCAGGGGACTCAGAGATTGAGCTGGTGTCCGAGGACCCGCTGGCCGCTGAGGATGCGCTGCCCTCGGGTTACGTGACCTTTGGTCACGTGGGCGGCCCGCCGCCATCGCCGGCCTCGCCATCGATCCAGTACAGCCTCCTGAGGGAGGAGCGTGAGGCCGAGCTGGACAGCGAGCTCATCATCGAGTCGTGCGACGCCTCCTCCGCCTCAGAGGAGAGCCCCAAACGGGAGCAGGACTCGCCGCCGATGAAACCAGGTGCCCTAGACGCCATCCGGGAGGAGCCGGGCGCCCGGGCCGAGGAGCGAACCCCCAGCCGGCGGGGCCTGGCAGAGCAGGAGCCCTTCCTCAGTTTCCCCTCGGCTGCCCCGCGAGCCGGCCCGGAGCTGCCCTCCGGAGACCCAGCCCCCGCCCCCGAGGGGCCCACCGCGCCACGGACACCCGTGGAAGCAGCGAGTTCCGACCAAAGCTCCGAGGCCACAAAGGCCCCCGGGCTTCGGGGGCCTGGCGTCATGCCCCCTCTGCTGTTTCTCAATAAGCAAAAAGGTAAAGTGACAGCGTTCTTGATTCACGTAGGTTGTCTGCTTACAGTTCTACCCCTGGGTGTGCCGAGATACTCAACAGAGGGGCGTTGGTCTGGCTCAGCCCTGTAGTCAGGTCCTGATTGGTCGAACAGTTGGCCAAGAACCATTCCAAAGAGGGTGGCGAGGAGAAGAGAGGATTCCGATTCTTAGCTGGGACTTCCATGGCAAAGCTCAGCCTGGCTGGCTGAACCCTAGCATCTCCAATAATCAGTTTTGTGGACACTCCAAGATCTCCTGAATGGAGTGAATGTGTCCCTCCTTTCATTCCAGGACTGGATTTCCTCACTTGGGATGGGATGGGGTTTGTTATTGTCTAAGGCTCATTTCCAGCTTCCCACTCCCTCAGTGATAGAGTGGGCTTACAGTCCCTCTAGGTGCTGAAACCCAGCATTAGCACTTCCATTTTGCCAACCAAAAGTTCTTCTTAAATGGACCAAGAGGATCTCAGTGCCATCCTTTCTCTTACCAAAACAAAGCAACCACAACAACAGAGTTTCTTGTCCCACAGTAAGACCTAAGGTGACTAATTTTAAAGTCACTTTTTACTTAGAATTATTTTAATCTGGCCATTATATTTTCCCTATGAGAGATCTTAAGTTGAATGAAGTCTTCAAATTCAGAAAAAATGGAAGTCATTACTTCGTCTTTCGGGCTTTCTTACCCCCAAGTCATCCTCTACACCAGGTTGCAGCTGTGTTATGGAATTCAGGAAGGAAATTAAAGTCAGGTGAACAGTAATAAATTAGGCACTGCACAGTCTAGTTAATGGGGCTACATTAAAGGTACAGAATCTCTCCCCAGATCCTGGGGAGAACTTGTAAACAAACCCTAAAAGCACAGCTCTGTTCAAGGTCCCCTCTCCCCCAT TCONS_00014643 r 3' 5274 TCONS_00014643 r 3' 6928 EMBV3_42421 AGAGTCAACGAACAGGGAGCCTTCTGGGGTCTGATTGTTGGATTTGTGATTGGCCTCATC Gene GeneID:527441|SLC5A4:XM_002694634:6_cdna Constitutive 0 NULL GeneID:527441 17 GENE SLC5A4 NULL solute carrier family 5 (low affinity glucose cotransporter), member 4 EMBV3_22125 ATGTGGAGCAATATGCAGAAGGACCATCCCGATTTTGACTCTGAGAAGAGGAAGGTAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21596 AAAACAACATCTTACCCAACACCCAGGCCCTATCCCAAGCCAGCACCTTCCAGTGGGAAA Gene GeneID:414922|CLDN1:NM_001001854:45_cdna Constitutive 0 NULL GeneID:414922 1 GENE CLDN1 NULL claudin 1 EMBV3_25542 GCTAGAGATGGATCCCCAAAAAGTGAATATCAACGGAGGAGCTGTTTCTCTTGGACATCC Gene GeneID:511082|ACAT1:NM_001046075:5_cdna Constitutive 1 NULL GeneID:511082 15 GENE ACAT1 MGC137917 acetyl-Coenzyme A acetyltransferase 1 EMBV3_17467 CTTCCCTGGTGGTCTAGTGGTTGAGAGTCAGCCTGCCAATGCTGGGGTCATGGGTTCAAT Gene BVV0102_096944 + 0 NULL GK000013.2:38981089-39015340 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22510 GGGTCAGGAGGAGAACCTGCCGCCCAGCTGACTTCTGTGTTTAGGCAGTTTATTGAAGAT Gene GeneID:532916|LOC532916:XM_002690172:5_cdna Constitutive 0 NULL GeneID:532916 9 GENE LOC532916 NULL similar to CG14803 CG14803-PA EMBV3_06940 AACCTTGAGGAAGATGAGGAATCACAGCTCCAGCAAAGGCAGTAGAACCCTGAAGCTTGT Gene BVV0102_101241 - 1 EMBV3_21903 GK000014.2:62569284-63227881 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00057124 1 XLOC_034925 NonCoding TCONS_00057124 XLOC_034925 NonCoding NonCoding - 14:62655075-62656330 - TSS42801 1255 2 TCONS_00057124_1 68 0.164940239043825 1 0 0 0 0 0 0 0 0 3.29904044208496e-05 0 0 0 0 0 7.49640291699924e-06 0 6.31350210928117e-05 0.000608528970177801 0 0 0 0 0 0 0 0 0 0 3.06140789603511e-05 0 0 0 noncoding ATTATAATAATATCTTTATTCTCTAAGATTGTTCAGGAGATTTCCTGTGTTAATAGAAGCATTATTTGCAATGCCACAACATCCTTTGAAAGCTTTGACTGCTGACATTTTACTCAATTTACATAATTCTGTCTCTTAGTTTGAATAATAATAATGATAACAACAACCACTTATGTGCTATGCACTGTTTTATACATATCAAGTAATTTAAAGCTCTTAAAGGATCTATGATGTAAGTACTATTATTATCCCGATTAAAGAGGAGAAGACTGCAAAGTCATAAACCTTGAGGAAGATGAGGAATCACAGCTCCAGCAAAGGCAGTAGAACCCTAGAGCTTGCGCTGCCTCCCTTGAAGAGATGGAGCTCACCTTCTTAAAATACACGTCGCTCAGTCAACTGGCATTTAAAAGTGTTTAGACTTTCTACTTGACCAGAAGTAGAGACACTTTGTTTTCAACTCAATCACTCAGAGGTGATTGGTCTCCTGGTCTTGATTTATATATGTGCATAACCGGTCCTTTATCCAGGGGAGTACAAACTAATTTTAAGGAATGTTTGAATTTCAGTCTTTCCTTTGCTGCCAATTCTCCCCTCTGGGTGTCTGCTGCTGACCGGCTTCCACTGCCTCTGCACTGCGCCTGCAGCTACTCACCACTATCTTTAATTCAATCTCTGCTCCTGTCACTTCTTGGTTTTCATATTCAGTGACAAAGCATTTATAGACATGACCAGTCAGTCAGTGTTCCTTGTTGTCCATGGGTCAAGCTGACAAATCACAGAATGCTGACTGTAATCTTTGTAATCTTTTCAATTTCTTTTCCTGCAGCTTGGACAATCTGCTTCTCTTTTGGCAAGGCTTTTGGGGATAATTCCAGAAACTTGAAGATCCTTCAGGTGAGCCAAACAACAAGGCAAGCAGTAAATTTTGTTCTTGAATGATACTGTTCAATGGAAAAAGCATATGAAGTACACAATTTCCAGATGAATTAGATGAGCAGTTCTTATATTTTAGTTTTTTGCCAGAACCACCTGAAAGAGCTTTTCAGGAATACAATCTGCAGCCTAGTCCTGGAGATTTTAATATATTATTTCTAGCAAGAGAACCAGAACTCGCATTTTAAAGTTTCTCTGGTGATCTAATGCAGTGACCGTACAAACACCACAAAGAAACTCTGGTGTAGGCTAACAAAAAGTAATCTTATAAAATATCTTATTTAGGTAGTTTTGCCCTTTAGATTAGATAGAATTTTAT TCONS_00053632 TCONS_00053633 . 5' 2796 TCONS_00053632 TCONS_00053633 . 5' 2796 EMBV3_02687 CCACTTAGAGGTGCTCTGTGGTGACCTAAATGGGAGGGGAATCTAAAAAAGAGTGGATAT Gene BVT0102_005111 + 0 NULL GK000021.2:44834311-45233297 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06407 AGAAAAACCTGCTGTGCCCTCCCTGCTATCTTGCCACCTTCCAGCTTTTGCAGAAACAAG Gene GeneID:614002|LOC614002:XM_002694735:106_cdna Constitutive 0 NULL GeneID:614002 18 GENE LOC614002 NULL similar to Uncharacterized protein C16orf46 EMBV3_09986 GGATGGGCCTTCTAGCCATCCATTTGGGCAGGCAGTCTGTTGCATATCTCCTTTCACCAT Gene GeneID:539029|LOC539029:XM_002700170:96_cdna Constitutive 0 NULL GeneID:539029 X GENE LOC539029 NULL similar to family with sequence similarity 123B EMBV3_03094 GAAGCGGATGGACTCAGCACAAACCACTGGGTCTTATTCCAGGGAGAGATGGGCCTTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06160 ATTTCTGAGAGCTTTATTGCGGGAATTCTTATGAGGCGACAGGAGACAGGGTCGCTTTTC Gene GeneID:407771|CCR1:NM_001077839:77_cdna UTR3_Alt 1 NULL GeneID:407771 22 GENE CCR1 NULL chemokine (C-C motif) receptor 1 EMBV3_15072 TCTCAGATAAGCTCCAAGGTCCCCGCCCAGTTCAAAACTTCTATGGTTCTATGGATTGCT Gene BVV0102_422378 + 0 NULL GK000010.2:85327432-85358182 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25396 TTTCTGAGGGGCTTCCCTCGATTCTCTTTCCCAACGCAGCTCACAAACCTACCCCACAAA Gene BVV0102_048024 + 0 NULL GK000030.2:17711888-17917701 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243849 TCONS_00243851 TCONS_00243850 TCONS_00243848 TCONS_00243852 1 XLOC_150276 NonCoding TCONS_00243851 XLOC_150276 NonCoding NonCoding - X:17771013-17780511 - TSS183377 1307 4 TCONS_00243851_4 52 4 0.862798778561651 5.90125474297783e-05 0.000173096439230748 0.000795449095256029 0.000386894316515921 0.000347163681243121 3.36118056637437e-39 0.000245677693157504 9.88567267371105e-05 0.00010769442672862 0.000193998776464718 1.6552021398267e-129 0 7.42543203533502e-43 9.35760592831544e-05 0 0 0 0 0.000338921037359605 0.000176956726054321 0.00023507472231376 0 0 0 0.000527413485270944 4.96185753339018e-08 2.49215499795678e-05 0 7.30628014206451e-87 0 0 noncoding GAGAGGAGGACGCGGAGCGCGTGCGGTGGCTCCTGGCCGCCCAGCCCAGCTGCCGGCTCGCCGCCGCTCTACACAGGGCGCTCTGGCATAACTACTGCAGAGGGGCTGCAGGCTCGGGCGCGCTGATTGGCTTCCCAGCAGCCGTCCCCTCTGACTGGCTCTGAGAGAAGTTCCCCAGCCTCACTCCTCCTTCCCGCCGCTCATTGGCCTACAGCCGAGTGGGCTTTTTCCTTTAGGATTTTTGCAACCTCTCCATCCTTCCTTGGGGTGCGTGGAGGTCCCTGGCCTCGGTACCCACCCCGCCAGCCAGGTCCAGCTCATCTCTGGCCACCAGAGCTTCCCAAGAGGTCTTCCTCCTCCGCACAAAATCCACCTCTTCTTCCTGCTTTCTGAGGGGCTTCCCTCGATTCTTTTTCCCAACGCAGCTCACAAACCTACCCCACAAAGAGTCACATTCAGGGCAGCTGGGGACCGCTGGCGAAGCGGGGGAGAAGCAGGTTCAGATAAAGAAAGGAAAAGGAGAGCCTCCACCCCAGGAATTCTGCAGTGAGTGCCAGGCCATGGAGGAAGAGGTTGTGTGTTGTGGGCTTAGAAGAGAGACAAAGGAAAGGCCTTTTCCCACCCCCAGAGCTCCCTGAGCTCCCAACAACATATGGGAGGGAGTCAACAGCCACCACGGACAGCAATTCATACTTTGAGTGGCCTCGTCCATCTGACTTCCCAAGCCTCAGCCACAGTACCAAGTCCAGGGGAATTTCAACGGTAGCATCTCATAAGAAAAGGCCATCACCCCACTGGCTATGAATTGACTCTTCTTCAGAGGAAAAAGGCCAATGATATCCTGACAACCGGAAAGAATGCCATTCTCTTGGCTGATAGTCTGCATATGGAGGAACAACATTTCACACACAGATGGAAGGGAAAGTTCATCTTCCTCAGTATAACTACTCCTATGGCAAAAAAAGGTCATTTAATCACATGGGAGCAGCTAGACAAGATGATAATATAAAGCAGGATTCTGTGTGCTTCTAAATCATCGGGACTTTATCAGCTGCCCCTACACCACTCAAGGATGGGAAACCCTGAGACGGTTAAACAGAAACATCAAAGAATAAAGGATGGATGTGCCTGTTGTCCTTTTGTATATTTTCATAGATATGGCTTAGTTCTTGCCTCTAAAATGAGAAGAACAGCAGGTTACCTTGCTATAAGCAGTTGTGTTCACAACTGAAGCAGAGCTGAATCTGAAATCCAGGGAGAAATTCACTTTCTCACTTTAGTTTTGCTGCAAACAGAACTTGTAATAT TCONS_00246434 r 5' 212 TCONS_00246434 r 5' 212 EMBV3_20995 GATAACTGGAACTTCCCTGGTGGTCCAGGAGTTAAGACTCTGCTTTCCAATGAAGAGGGC Gene BVV0102_179279 + 1 EMBV3_30689 GK000003.2:16527319-16530783 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172228 1 XLOC_104061 NonCoding TCONS_00172228 XLOC_104061 NonCoding NonCoding - 3:16527344-16529027 - TSS128328 1683 1 TCONS_00172228_3 161 0.57516339869281 1 0 0.000277557010386765 0.000101499271289209 0.000104471768669169 4.44071805278771e-05 7.13635562873984e-05 0.000136025498607482 7.58694696119263e-05 5.62302138932935e-05 3.75051800926306e-05 0 0 6.3737845539047e-06 1.39853848720579e-05 0 3.20194557966193e-12 0 0 0 0.000102259196773172 2.44835218230255e-05 1.9841357339349e-05 0.000167549294857773 5.45101581455954e-06 0 0.000100645924575357 0.000219886304439502 0.00010372526773998 6.27788927840366e-05 0 8.11425223070666e-06 XM_005197702.1 CREB3L4 PREDICTED: Bos taurus cAMP responsive element binding protein 3-like 4 (CREB3L4), transcript variant X4, mRNA. 0.0 749 100.00 0.245989304812834 0 noncoding 0 0 0 0 -0.392521509270658 0.0730174741874618 -0.0198781559997539 0.749456003776322 GTGTTTGTTTCCAGTGTACAGCAAAAAAGTCAATTATACATATACATATATCCACTCTCTTTTAGATTTTTTTCCCCATATAGGCCACTACAGAGCATTGAGTACATTTCCCTGTGCAATACAGTAGGTCCTGATTAGTTATTATTTTATTATTATTTATTATTTGGCCATACCTTGAGTTATGTGGGACCTTAGTTCCCTGATCCCATATGGAGCAAACCTGTGCCCTCTTCATTGGAAAGCAGAGTCTTAACTCCTGGACCACCAGGGAAGTTCCAGTTATCTATTTTATACAAAGTAGTATGTATGTGTCAATTCCAATCTTCCAATGTACTCCTCACCCTCCCTTAGGCCCTAGAAATGGTGAATTTGTTTCCTACATCTGTAACTCTATTTCTGTTTTGTAGATAAGTTCATTTGTACCTTTTTTTTAGATTCCATATATAAGGGATATTATATGATATTTGTATTTGACTTACTTCACTCAGTATAACCACCTCAAAGTCCATCTACGTTCCTGCAAATGGTGTTAATTTCCTTTTTTATGGCTAAGTAATATTCCATTGTATATATGTGCCACCTCTTCTTTACCTTTCCTCTGCTGATGGGTATTTAGGTTGCTTCCATGTCCTGGCTGTAGGAAATACTGCTGCAATGAACATTTGGGTGCATGTATCTTTTTCAAATTATGGTTTTCTCCAGATATATGCCCCAAATTTGTGTGCTTTATTCACTGAACTATTCTTTATCTGAAGTACTGTTGGGAGGCAGATGAAAATCATACCTAATCAGTATAGCTCCATTAAAAAAAATTTTTTTTGGCCATGCCCAAATGCATGTTGGATTGTAGCTTCCCAACCAGAGACTGAGCCTGCACTGTCTGCATTGGGAAGTCCCCATTATTTTATTCAAAGTGAATTCCTGGGTCATCAGTCTCTAGATGAAGGCAAAATGTCCCAACTTTTGGTATTATTACATTTGTATCATGTTATCTGTCTCCTCTTTGGTAAAATTGTAAAGTGTACAAATACAGAACACATACTGCATATTATTACTGGTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGCCCTGTAGGCTACCAGGCTCCTCCCTCCATGGGATTCTCCAGGCAAGGGTACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCGGACCCAGGGATCGAACCCTGGACTCCCACATTCCAGGCAGACGCTTTAACCTCTGAACCACTAGGGAAGCAGTTACTATTACTGGTAACTATATGCAAAAAATAAGTCAAACTCCCAAACCAAATCCGAGTATTTTAACCTTTTGCAGTTTTCTAGACCCTTGTCCCTCCATTAGTTAACCTGTGAGTATGTATACATAACTGCTGTTCTTTATCAATAGCATAATGCATGGATTATGGATTTGGACAACCCACGATTACGCGACATTCCAAAGTCAACGCGCTGTCTGGTTATTTACTCCCGGCCTAGATTCGGAGTCACGTGGCAAGTGAAACCAAACCTCTGCCCACATTCCCGGAACTTCCCCTCACCCCACCCCCTTCCCTACTGTAAGTCTTCTGGCTCTTACCCTCCTTCTCACGCCGCGGAACCAAATCCCTGCCAGACAAATAAAGGCCCTGGCTGCACTGGCCTCTTTCCCC TCONS_00172227 s 5' 27 TCONS_00172227 s 5' 1709 EMBV3_30704 TTGAGACCCAGCCACTTAATTCCATCCTAGATGACAACGGCAGCTCAACTCATGGCTTCC Gene GeneID:100301324|LOC100301324:XM_002700038:147_cdna Constitutive 0 NULL GeneID:100301324 X GENE LOC100301324 NULL similar to X-linked ectodysplasin receptor EMBV3_09429 TGCGCTCATGACTACATTAACACAGAACGCCAGCTCATCAACAGCCGACTCAAGGAGTGG Gene GeneID:513000|ING3:XM_002686906:114_cdna Constitutive 1 NULL GeneID:513000 4 GENE ING3 NULL inhibitor of growth family, member 3 EMBV3_25689 CGCCTCTGTGCTATTCCTAGGGCGTGATATTGCAGGGAAGAGGAGGAAAGCTGGAAGAAT Gene GeneID:511936|LOC511936:XM_002686347:9_cdna Constitutive 0 NULL GeneID:511936 3 GENE LOC511936 NULL similar to cytochrome P450 isoform 2J EMBV3_25351 GTTTGCAGACAAATCCTTCACCTTCAGGAAGAGAGGGCTGGTGTAGAGAGCTAGTAGAGC Gene GeneID:407241|KLF15:NM_001082425:5_cdna Constitutive 0 NULL GeneID:407241 22 GENE KLF15 NULL Kruppel-like factor 15 EMBV3_24077 CAGGGCTACCTCTTTCCTGCTGGGCTGAAAGACATGCTGAAAACAGCCTGGCTACAGGGA Gene GeneID:281465|ROM1:NM_174174:10_cdna Constitutive 1 NULL GeneID:281465 29 GENE ROM1 MGC139433 retinal outer segment membrane protein 1 EMBV3_18420 AGTCGGTTGTGCTAAACTCTGGAATGAATGGTGTTTTATCACCTGAAATCGAATCCTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01928 GACCTTTTCCAGTCCTGTGACTACTGCTGAGTTTTCCAAATGTGCTGGCATATTGAGTGC Gene GeneID:533609|ACOT11:NM_001103275:82_cdna UTR3_Alt 2 NULL GeneID:533609 3 GENE ACOT11 MGC166303 acyl-CoA thioesterase 11 EMBV3_01674 TGGGACACTGTAAAAGCAGTGCTAAGGAGAAAGTTCATAGCAATACAGGCATACCTCAAG Gene BVV0102_242535 + 0 NULL GK000006.2:22745225-22959365 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160971 TCONS_00157937 TCONS_00023027 TCONS_00123172 TCONS_00055299 TCONS_00253241 TCONS_00220656 TCONS_00123617 TCONS_00160964 TCONS_00135549 TCONS_00165811 TCONS_00162457 TCONS_00166787 TCONS_00199804 TCONS_00089140 TCONS_00206484 TCONS_00099588 TCONS_00238440 TCONS_00206863 TCONS_00198585 TCONS_00087858 TCONS_00148277 TCONS_00210178 TCONS_00017462 TCONS_00006469 TCONS_00251704 TCONS_00007362 TCONS_00055859 TCONS_00063138 TCONS_00189807 TCONS_00240690 TCONS_00098384 TCONS_00254568 TCONS_00190575 TCONS_00066280 TCONS_00251004 TCONS_00249913 TCONS_00031897 TCONS_00252488 TCONS_00088291 40 XLOC_097864 XLOC_096391 XLOC_013697 XLOC_074726 XLOC_033107 XLOC_156182 XLOC_133973 XLOC_075169 XLOC_097857 XLOC_081772 XLOC_100651 XLOC_099338 XLOC_101623 XLOC_121456 XLOC_053926 XLOC_125006 XLOC_059831 XLOC_145107 XLOC_125383 XLOC_120239 XLOC_052647 XLOC_090159 XLOC_128688 XLOC_009039 XLOC_002032 XLOC_154645 XLOC_002923 XLOC_033667 XLOC_037865 XLOC_115844 XLOC_147354 XLOC_058630 XLOC_157500 XLOC_116610 XLOC_040994 XLOC_153947 XLOC_152856 XLOC_018142 XLOC_155429 XLOC_053078 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_13258 GAACGTGACTCGTTCCAGGCCTCAGAGGCACCAGAATACTTTTAGCTTCAAAAATGACAA Gene GeneID:615706|LOC615706:XM_002692395:323_cdna Constitutive 0 NULL GeneID:615706 13 GENE LOC615706 NULL similar to LOC614778 protein EMBV3_41670 AAAGACCAAGCAAGGCTTTTGCCTGATAAAGTGATTTTCACAGCCTGCTACCTCTGGGGT Gene GeneID:493729|WNT2:NM_001013001:33_cdna Constitutive 0 NULL GeneID:493729 4 GENE WNT2 NULL wingless-type MMTV integration site family member 2 EMBV3_23155 TACCCTGGCTATAAAAGTGGACTAAGGACCCTGTTCAACGTCGGTTCTCCCTTGAGCTGG Gene BVV0102_364550 - 1 EMBV3_31913 GK000016.2:2734830-2763987 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00200979 TCONS_00070718 TCONS_00154785 3 XLOC_122629 XLOC_042496 XLOC_094540 NonCoding TCONS_00154785 XLOC_094540 NonCoding NonCoding - 27:49931-88820 - TSS115953 517 0.769825918762089 3 0.986782555029829 0 0.00046646538854255 0.000268491089726738 0.000949775724635992 1.83762090053175e-10 0 0 0 0 0 0 0 0 0 8.24680650743402e-05 0 0 0 0 0.000125189328566791 0.000440386149557819 0 0 3.24268608108645e-05 0 0 0 0 0 0 XR_229235.1 LOC101905472 PREDICTED: Bos taurus uncharacterized LOC101905472 (LOC101905472), 1e-104 383 84.34 0.688588007736944 0 noncoding GCGGACAGCGCTGCCCGAGCCTCCCTGGCCGCCCGCCGGCCTCCCCGCGTCCCCAGGTTCCATTCTGTTACAGGTCATTGCAGAGTACTGTGTAGAGTTCCCTGTGCCAGACGGTTTCGTGGTGACCCAAGGAGGAAAGAGCAGATGAAACCAAGGAGGGTCTTGGAAGCGGGACTGGAAAGACCAGACCCTGTTTTCCCTCCCTCCCCCATGCTGTAACTGTTATTGGATCTCAGGGCCTCCTGACCTGCGGAACCTGTCTCCCCTCCTACCCCACAGGGAGAAGGCATTTGCCTTACTCTTCCCCACCCAGTCTACGTGCCTCATCCAATCAGCAAACGACCTGCGAGGCCCCTGTCCCACTCCTTGTACCCTGGCTATAGAAGCGGACTAAGGACCCCGATCGACGTCGGTTCTCCCTTGAGCTGGCCCACTGTTCCAACAGGGTCTCCCACTCTAAAACTTGACTCCCTTCTTATTCTGTCTCATGTCTGGAAATTCTTTTCCAACCTGCGCC TCONS_00154783 s 3' 7046 TCONS_00154783 s 3' 7046 EMBV3_31824 GTCCTCAACGTGCCCCCGTACTGCACAGAGGGTTTCCAGGTGGCCTACGTGCTGTTCCAG Variant GeneID:512692|RRP7A:NM_001110074:162_cdna 218^343 1 EMBV3_15583 GeneID:512692 5 GENE RRP7A MGC133533 ribosomal RNA processing 7 homolog A (S. cerevisiae) EMBV3_05105 TCAGGATATAATGTAGAGCAAGTGTAAGGAACTAAAATGTGGAAAAGAGACCACACAAAC Gene GeneID:523174|PRMT3:NM_001102076:28_cdna Constitutive 0 NULL GeneID:523174 29 GENE PRMT3 MGC159440 protein arginine methyltransferase 3 EMBV3_07593 ATCAAGGTTGAGGAAGACTTTGGCTTTGAAGCGGACGAGGCCCTCGACTCAAGCTGGGTT Gene GeneID:506610|TFPT:NM_001075274:25_cdna Constitutive 0 NULL GeneID:506610 18 GENE TFPT MGC140750 TCF3 (E2A) fusion partner (in childhood Leukemia) EMBV3_32477 AATTGAAGCCACATCCTTCACCCTCAAGGCTGTGAGGCCTCAAGCCAAGTACTGCATCCA Gene GeneID:514933|EBI3:NM_001100365:30_cdna Constitutive 0 NULL GeneID:514933 7 GENE EBI3 NULL Epstein-Barr virus induced 3 EMBV3_24921 TGTGTTCCAGATGGTGGAGAACACTTAGGGAACTGCTTACTGGCTGGATCTGTCTCCCTC Gene BVT0102_061563 + 0 NULL GK000030.2:42131026-42306675 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00062753 TCONS_00063037 TCONS_00006966 TCONS_00207277 TCONS_00055302 TCONS_00250620 TCONS_00210177 TCONS_00249921 TCONS_00186108 TCONS_00148465 TCONS_00175865 TCONS_00248863 TCONS_00109859 TCONS_00251760 TCONS_00008225 TCONS_00218891 TCONS_00066093 TCONS_00010052 TCONS_00064811 TCONS_00161793 TCONS_00175545 TCONS_00040583 TCONS_00137302 TCONS_00208127 TCONS_00116666 TCONS_00117484 TCONS_00021596 TCONS_00038933 TCONS_00244654 TCONS_00207068 TCONS_00066192 TCONS_00152628 TCONS_00189806 TCONS_00206861 TCONS_00199595 TCONS_00033746 TCONS_00007555 TCONS_00019962 TCONS_00107574 TCONS_00020399 TCONS_00153219 TCONS_00185807 TCONS_00240878 TCONS_00064867 TCONS_00108589 TCONS_00252056 TCONS_00162783 TCONS_00124845 TCONS_00176254 TCONS_00135701 TCONS_00142124 TCONS_00206539 TCONS_00047865 TCONS_00006827 TCONS_00241788 TCONS_00160965 TCONS_00022065 TCONS_00207514 TCONS_00250881 TCONS_00242595 TCONS_00020016 TCONS_00175818 TCONS_00031911 TCONS_00209098 TCONS_00066285 TCONS_00254831 TCONS_00179470 TCONS_00019263 TCONS_00179054 TCONS_00055388 TCONS_00129415 TCONS_00222115 TCONS_00154085 TCONS_00152726 TCONS_00070810 TCONS_00207359 TCONS_00175199 TCONS_00224114 TCONS_00152738 TCONS_00250938 TCONS_00156870 TCONS_00020010 TCONS_00240475 TCONS_00249570 TCONS_00209529 TCONS_00010588 TCONS_00218178 TCONS_00010779 TCONS_00238445 TCONS_00200933 TCONS_00250197 TCONS_00115687 TCONS_00252012 TCONS_00231502 TCONS_00123169 TCONS_00176249 TCONS_00038457 TCONS_00165813 TCONS_00136848 TCONS_00122321 TCONS_00249283 TCONS_00060369 TCONS_00252354 TCONS_00023615 TCONS_00057311 TCONS_00137224 TCONS_00006222 TCONS_00218899 TCONS_00251930 TCONS_00055867 TCONS_00199603 TCONS_00065249 TCONS_00249414 TCONS_00157488 TCONS_00032143 TCONS_00039853 TCONS_00250854 TCONS_00238357 TCONS_00249989 TCONS_00072815 TCONS_00177280 TCONS_00250580 TCONS_00218553 TCONS_00185582 TCONS_00253665 TCONS_00156997 TCONS_00187057 TCONS_00125001 TCONS_00048558 TCONS_00245928 TCONS_00080765 TCONS_00054574 TCONS_00009591 TCONS_00218851 TCONS_00244651 TCONS_00088087 TCONS_00223462 TCONS_00218943 TCONS_00056728 TCONS_00157440 TCONS_00189890 TCONS_00231487 TCONS_00198816 TCONS_00007442 TCONS_00064461 TCONS_00238326 TCONS_00201733 TCONS_00166733 TCONS_00156732 TCONS_00249780 TCONS_00244653 TCONS_00185876 TCONS_00251706 TCONS_00056147 TCONS_00242007 TCONS_00239418 TCONS_00107447 TCONS_00116101 TCONS_00070840 TCONS_00063487 TCONS_00030941 TCONS_00116696 TCONS_00176255 TCONS_00124110 TCONS_00040698 TCONS_00048821 164 XLOC_155966 XLOC_037480 XLOC_037764 XLOC_002528 XLOC_125795 XLOC_033110 XLOC_153563 XLOC_128687 XLOC_152864 XLOC_112161 XLOC_090345 XLOC_105644 XLOC_151806 XLOC_065763 XLOC_154701 XLOC_003783 XLOC_132210 XLOC_040811 XLOC_005604 XLOC_039535 XLOC_098678 XLOC_105326 XLOC_024399 XLOC_083512 XLOC_126640 XLOC_070832 XLOC_071650 XLOC_012269 XLOC_022753 XLOC_150512 XLOC_125587 XLOC_040909 XLOC_092393 XLOC_115843 XLOC_125381 XLOC_121248 XLOC_019979 XLOC_003116 XLOC_010640 XLOC_063484 XLOC_011076 XLOC_092984 XLOC_111860 XLOC_147542 XLOC_039591 XLOC_064494 XLOC_154997 XLOC_099664 XLOC_076388 XLOC_106033 XLOC_081924 XLOC_086549 XLOC_125061 XLOC_027997 XLOC_002389 XLOC_148452 XLOC_097858 XLOC_012736 XLOC_126029 XLOC_153824 XLOC_149258 XLOC_010694 XLOC_105597 XLOC_018156 XLOC_127609 XLOC_040999 XLOC_157763 XLOC_109243 XLOC_009943 XLOC_108827 XLOC_033196 XLOC_078128 XLOC_135424 XLOC_093846 XLOC_092491 XLOC_042587 XLOC_125876 XLOC_104982 XLOC_137410 XLOC_092503 XLOC_153881 XLOC_095330 XLOC_010688 XLOC_147139 XLOC_152513 XLOC_128040 XLOC_006139 XLOC_131641 XLOC_006330 XLOC_145112 XLOC_122583 XLOC_153140 XLOC_069856 XLOC_154953 XLOC_140991 XLOC_074723 XLOC_106028 XLOC_022281 XLOC_100653 XLOC_083059 XLOC_073876 XLOC_152226 XLOC_036700 XLOC_155295 XLOC_014282 XLOC_035110 XLOC_083434 XLOC_001785 XLOC_132218 XLOC_154871 XLOC_033675 XLOC_121256 XLOC_039971 XLOC_152357 XLOC_095943 XLOC_018386 XLOC_023670 XLOC_153797 XLOC_145024 XLOC_152932 XLOC_044583 XLOC_107054 XLOC_153523 XLOC_131873 XLOC_111635 XLOC_156604 XLOC_095457 XLOC_113105 XLOC_076544 XLOC_028690 XLOC_150855 XLOC_049649 XLOC_032383 XLOC_005144 XLOC_132170 XLOC_052874 XLOC_136762 XLOC_132262 XLOC_034531 XLOC_095895 XLOC_115927 XLOC_140976 XLOC_120469 XLOC_003003 XLOC_039185 XLOC_144993 XLOC_123378 XLOC_101569 XLOC_095192 XLOC_152723 XLOC_111929 XLOC_154647 XLOC_033950 XLOC_148671 XLOC_146084 XLOC_063357 XLOC_070270 XLOC_042617 XLOC_038214 XLOC_017192 XLOC_070862 XLOC_075662 XLOC_024514 XLOC_028952 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_12783 TTACAGTCTTCCCCAGTCCTCACAAGGTAGATGCCCGTATTATCCTCATTTTGCAGATGG Gene BVV0102_440161 + 0 NULL GK000009.2:74454354-75025924 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237709 1 XLOC_144794 Coding TCONS_00237709 XLOC_144794 Coding Coding AHI1 9:74471406-74549142 j TSS177651 3427 1 TCONS_00237709_4 936 0.0411438576014006 19 0.956158744452306 9.37539269811227e-05 1.29311245290297e-61 0.000133421694941812 6.6377214800856e-06 1.54190015923653e-05 0.000198908131049174 8.12555890714377e-43 7.40740100618897e-05 7.54133769072679e-05 9.54585106809095e-83 5.534123144342e-33 2.10950366258142e-80 6.81056078536624e-31 1.08304147980581e-23 6.95502726913275e-24 6.95762049590358e-19 3.76484943465602e-58 2.83642462658068e-06 4.19354969450178e-54 1.11866731292832e-12 9.06442747656793e-20 4.50380487093287e-18 3.30410468569917e-137 4.85555001739896e-05 2.75415764582999e-05 1.30702328684288e-25 6.32926942857983e-06 7.01177888216069e-11 1.55389593040921e-30 5.85243542841582e-54 XM_005199415.1 AHI1 PREDICTED: Bos taurus Abelson helper integration site 1 (AHI1), 0.0 5537 100.00 0.895535453749635 NM_017651.4 AHI1 Homo sapiens Abelson helper integration site 1 (AHI1), transcript 0.0 3411 85.78 0.830172162241027 TCONS_00237709_4 sp|Q8N157|AHI1_HUMAN AHI1_HUMAN Jouberin; 0.0 1469 81.04 0.961538461538462 1 coding 0 0 0 0 0.0385645494855027 0.779380973485315 -0.0340722419933454 0.55138033384561 CCGAGGTCCGGCAGAGGTCCGAACGGAGAGCAGGGCCCGCATCGGTTGTCATGGGGACGGCGGCGTAGGCAGGCGCTGACGTCGGCGGGAGGCGCGCTGCCTGCACTGCGGCACCAGGCGGGCGCTCAGAGCCTGGGAGGCGGGCGGCTGGGGTGGCTGGTGACCACATCACTCCCAGCCCGCCCCGCACGGTCCGGGCGGTGGCTCCCTGGGGACCCGCTGTCGGCAGTTCTGCGCCCTCTTCTGTGGTGTCATCTTGGTGCTGAATCTTGAACCTGTGAAATGCCTTCTTAATTACGTCTGAGAAAAGGATCCTGACTGAATCAATGCTTTATACTATCACTCAGTGCTCTCCATAAAGCTGAGATATGCCCACTGTTGAGAGTGAAGCTAAAGTGAAGACCAAAGTTCGCTTTGAGGAGTTGCTTAAGGCCCACAATGATCTAAGACGTGAAAGAAAAAAACTGAAGAAGAAAATTGCCCAACCTGGAGAAAAAATCTCACTTGATGCTGTTACAAGCAATCTTCAGAAAATCAGGGAAACTAAAAGTGATGATATAACTGCTGCTAACACTAAGAACCCAGAGAAGAACATGCGAGTAATTAAAAACAAACCAAGGGATCCGCAGTCAGCAACTGAAGATCCAGAAAATGATGTTATTGTGGAGGAGGACAAGCAAGAAAAGGCAAATAAAAAGGTTATGAAAACAGCGCTCCAGGTGACTGCACAAGAGATGGAGCCAGAAGCTCCTGAGAAGGGAGATGCGGCACCTCAGAAAAGACGGACTAAGCCACAGCCAGGTGTGACTCATGACAAAAGTGAAAAGGCCAAGGAGGAAGGAGAAAAGAATACTTTAGATGAGGAACAACTGATGCAAGTATACCAGCTCCAAGTGGCTGAAGAAATGGCAAAGGAGATTAAGAAGAAAATCCGAAAGAAACTCAAGGAGCAGTTGTCTTACTTTCCCTTAGATTCTTCATTGCATGATGACAAATTGAGTGGTGAAAAAAGAAAAAAGAAAAAAAAGAAAGTTCCCACCTTGTCTAAATCTGAAACAAGTACATCGATCATCTCTGATGACCCAGTTGAAGGTGAACAAAAGAAAGAATCTCCAGTTGGAGCAGTTACTTCAGATACTCATCAAGATGATGAAGTGAGCTCAAAGGAACAAAATGTAGAAGACAACATGCAAGATGACTCAAAATCCAAACTGAAAAAAAAGAAAAAGAAGGCTAAAACAGATGATAATGAAGATACTGATGGTGATGGTGTTCATGAAATAACAAGCCGTGATAGTCCAGTTTATCCCAAATGTTTGCTTGATGATGACCTTGTCCTGGGAGTTTACATTCACCGAACTGATCGTCTTAAGTCAGATTTTATGATTTCTCACCCAATGGTCAAAATTCATGTGGTTGATGAGAATACTGGTCAATATGTCAAGAAAGATGATAGTGAACGGCCTGTTTCGTCTTACTATGAAAAAGAGAATGTGGATTATATTCTTCCTATCATGACCCAGCCGTATGATTTTAAACAGTTAAAATCAAGGCTTCCAGAGTGGGAAGAACAAATTATATTTAATGAAAACTTTCCCTATTTGCTTCGAGATTTTGAGGAGAGCCCTAAAGTCATCCTTTTCTTTGAGATTCTTGATTTCTTAAGCATGGAAGAAATTAAGAATAACTCTGAAATTCAAAACCAAGAATGTGGCTTCCGGAAAATCGCCTGGGCATTTCTCAAGCTTCTAGGAGCCAATGGAAATGTAAACATCAATTCAAAACTTCGCTTGCAACTGTATTACCCACCTACTAAGCCTCGATCCCAGTCAAATGTCGTTGAGGTTTTTGAGTGGTGGTCAAAATGTCCAAGAAATCATTATCCATCAACGCTGTATGTAACTGTAAGAGGATTGAAAGTTCCAGAATGTGTAAAGCCATCTTACCGTTCTATGATGGCTCTTCAGGAAGAAAAGGGTAAACCAGTATACTGTGAGCGACACCATGAGCCAAGTTTAGTGGACACAGAGCCTGGATTAGAAGATTCAAAGGAAGTGGTGAAGTGGAAACGGTTGCCTGGGCAGGCCTGCCGTATCCCAAACAAGCACCTCTTCTCACTAAATGCAGGAGAGCGAGGATGCTTTTGTCTTGCTTTCTCCCACAATGGAAGAATATTAGCAGCAGCCTGTGCCAGCCGGGATGGATATCCAATTATTTTATATGAAATTCCTTCTGGACGTTTCATGAGAGAATTGTGTGGCCACCTCAATATCATTTATGATCTTTGCTGGTCAAAAGACGATCGTTACATTCTTACTGCATCATCTGATGGCACTGCCAGGATATGGAGAAATGAAATAAACAATACAAATACTTTCAGAGTTTTACCTCATCCTTCTTTTGTTTACACGGCTAAATTCCACCCAGTTGTAAGAGAGCTGGTGGTGACAGGATGCTATGATTCTGTGATACGTATATGGGAAGTTGATATGAGACAGGATCCTGCCGTATTGATCCGACAGTTTGACACTCACAAGAGTTTCATCAACTCTCTATGTTTTGATATTGAAGGTCATCACATGTATTCAGGAGACTGCACAGGGGTGATTGTTGTTTGGAACACGTATGTCAAAGTCAACGATGCACAACACTCAGTGCGTCACTGGAGCATAAACAAGGAAATTAAAGAGAGTGAGTTTAAGGGAATCCCGATAAGTTACTTGGAGGTTCATCCCAATGGAAAACGTTTATTAATTCATACCAAAGACAGTACTTTGAGAATTATGGATCTCCGAATATTAGCAGCAAGGAAATTTGTAGGTGCAGCAAATTATCGAGAGAAGATTCATAGCACTTTGACACCATGTGGGACTTTTCTCTTTGCTGGAAGTGAGGATGGTATAGTATATGTTTGGAACCCAGAAACAGGAGAGCAAGTAGCAATGTATTCTGACCTGCCATTCAAGTCACCAGTTCGAGACATTGCTTATCATCCACTTGAAAATATGGTTGCATTTTGTGCATTTGGGCAGAATGAGCCAATTCTCCTGTATATTTATGATTTCCATGTCTTCCCCAGTCCTCACAAGGTAGATGCCCGTATTATCCTCATTTTGCAGATGGTAAAACTGATGCCCAGGGAAATTAAGTTGAATGACTTCACACGATTGATAAAATGATGTCACTCGCCAGACTATCTAACTCCAGAGCCTGTGTTTTTAAAACATTAAACTGTCTGCTACACTACTAATTTAGACTTTGTATTTCCTATTTCATGAAGTAACTGAAGAAGGTAGCCATATATACCTGTGGTGAAATGAAGTGTTTGTTTTCAATTTTAATATTTAGGAAGACCCCTGATAATTAAAACTTTGGTTGTCTAGTATCATTATTAATTGTTCACTCCTTTGCAAATGTTGGGGATAAT EMBV3_36087 CCCTAGACAGTAAGCCTGTGAAGATAATCTGATATGTTGTTTCATGGCGTTTGATGAGCC Gene GeneID:514925|KLB:XM_002688204:73_cdna Constitutive 0 NULL GeneID:514925 6 GENE KLB NULL klotho beta EMBV3_33899 CTTGACACAGATGTGGTGACACAGAGGTGGTCCGTTCAGTCTCCCTGTTTGTGCTTCAAG Gene GeneID:513038|CTSK:NM_001034435:91_cdna Constitutive 0 NULL GeneID:513038 3 GENE CTSK MGC134021 cathepsin K EMBV3_27071 TCGACGGAAGGCAGCGCCGCGGATCGAATGACCTGGAGGCAGAAGCCAGCCTTCCGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41627 GATCAGGAATAGGTTAGGGAATGGTCACTTCTGGTTTTCCAAGAGTCAGTCCTTCTCTGC Gene GeneID:618177|SYT11:NM_001099171:236_cdna UTR3_Alt 2 NULL GeneID:618177 3 GENE SYT11 MGC152070 synaptotagmin XI EMBV3_28784 GATGAAGAGCAGATTCTTCAGAGTCACTTATGAACACTTGTGCATTTTAAAATGTTATCT Gene GeneID:533188|CD2AP:XM_002697272:32_cdna Constitutive 2 NULL GeneID:533188 23 GENE CD2AP NULL CD2-associated protein EMBV3_13445 GAGGACAAGCAGTCCCGGCTGCGCTACCAGGGATTCTGGCCAAACATCCATCCGCAGCTC Variant GeneID:510129|TMEM134:NM_001080254:566_cdna 220^284 1 EMBV3_13354 GeneID:510129 29 GENE TMEM134 MGC152115 transmembrane protein 134 EMBV3_10903 AGGAATTTTATTTGTGGTCAGCCAAGTGCCATCTCTTGCCAAGACTCTGGCTGGCAAGGG Gene BVT0101_006545 + 0 NULL GK000007.2:53727632-53853038 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213570 TCONS_00213572 TCONS_00213573 TCONS_00213575 TCONS_00213568 TCONS_00213574 1 XLOC_130487 Coding TCONS_00213574 XLOC_130487 Coding Coding PCDHA13 7:53736884-53788264 j TSS159966 4549 1 TCONS_00213574_3 617 5 0.911559197337434 7.65794372631224e-07 0.000152223791490937 1.69369946349077e-07 0.000149689461240855 2.29371534907269e-26 7.94955708779105e-14 0.000122306963883514 2.59996306607487e-06 3.30008959543339e-05 0.000226550111213729 5.94893140342122e-06 2.26542648046861e-11 4.69575257029911e-06 3.30903004781794e-05 3.4777542353128e-63 0.00167968331545198 0.000251315266964816 0.000565800283386693 0.000256840876280034 8.76805149703115e-05 4.06878947632849e-05 0.00146749669576022 0.00310552787697258 0.00160102025136044 0.000154337573848954 0.000109950061482641 1.3150700861419e-09 0.000368572109517638 0.000298434214870345 0.000384478817423413 XM_005209450.1 PCDHA13 PREDICTED: Bos taurus protocadherin alpha 13 (PCDHA13), transcript 0.0 8195 100.00 0.998681028797538 NM_018899.5 PCDHAC2 Homo sapiens protocadherin alpha subfamily C, 2 (PCDHAC2), 0.0 3339 91.23 0.520993624972521 TCONS_00213574_3 sp|Q9Y5I4|PCDC2_HUMAN PCDC2_HUMAN Protocadherin alpha-C2; 0.0 1129 93.94 0.961102106969206 1 coding 1 1 1 1 -0.0658249486967352 0.666925059710995 0.0157401873164757 0.825370407675463 CCGCGGCCCGACTACCAGCTGCAGGTAAGCGAATCGGTGGCCCCTGGAGCGCGCTTTCACATAGAGAGCGCCCAGGACCCCGACGTGGGCACCAACTCGGTGCAGACCTACGAGCTCAGCCCCAATGAGCACTTCGAGCTGGACCTGAAACCCCTGCAAGAGAACAGTAAGGTGCTGGAGCTGCTGCTGCGGAAGGGCCTAGACCGCGAGCAGGCAGTCTTGCACCACCTGGTTCTCACAGCTGTGGACGGGGGCAGCCCAGCCCGCTCCGGCACCGCGCAGATCTCGGTGCGAGTCCTGGACACTAACGACAATTCTCCCGCTTTCGACCAGTCCACTTACCGCGTCCACCTTCGAGAGGACTCGCCCCCAGGCACGCTAGTGGTGAAGCTGAATGCCTCCGACCCGGATGAGGGCTCCAATGGCGAGCTCACGTACTCCTTGAGCAGCTACACGTCGGACCGGGAGAGACAGCTCTTCAGCATCGACGCCAGCACGGGGGAAGTGCGCGTCAGCGGAGCGCTGGATTACGAGGAGGCCTCCTCCTACCAGATCTATGTGCAGGCAACTGACCGGGGTCCGGTGCCCATGGTGGGTCACTGCAAGGTGCTGGTGGATATCGTGGACGTGAATGATAACGCACCAGAGGTGGTGCTCACGGATCTGTACAGCCCGGTGCCTGAGGACGCTGCCTCCAACACTGTTGTGGCCCTTCTCAGTGTCAATGACCAAGACTCGGGTCCCAACCGGAAAGTGAGCCTGGGACTGGAGGCCGCACTGCCTTTCCGACTGAATGGTTTTGGAAACTCCTACACGCTGGTGGTGAGTGGACCCCTGGACCGGGAGCGGGTGGCTGCCTACAACATCACAGTGACTGCCACTGATGGGGGAGTACCACAGCTCACGTCCCAGCGGACACTGCAGGTTGAGATCTCTGACATCAATGACAATCCCCCCAGCTTCCCAAAGGACTCCTACTCCATCTACATCGAGGAGAACAATTTGCCAGGGGTATTGCTCTGCACTGTGCAAGCCACGGACCCAGATGAAAAGGAGAATGCGGAGGTGACCTACTCCCTCCTGGAGAGGGAAGTTCAAGGGCTGCCAGTCACTTCCTATGTCTCCATTAACAGTGCCAGTGGCAGCCTTTATGCTGTCAACTCCTTTGATTATGAGAAGTTTCGGGAGTTTTTTGTGATTGTGGAGGCCCGAGACAATGGGAGCCCACCACTGAGCAGCACTGTGACCGTCAATGTGTATGTAGTGGACGTGAATGACCATGCCCCTCACATCCTGTACCCTACCTCAACCAATTCATCAGTAGCCATTGAAATGGTGCCTCGAACTGCCCCTGCTGGCTACCTGGTCACTAAAGTCATAGCCATGGACTCAGATTCTGGGCAAAATGCTTGGCTCTTTTACCATCTGTCCCAGATTTCTGACCTGGACCTCTTTAAAGTAGAGCTCCACACAGGAGAAATTAGGACTACCAGGAAGATGGGAGACGAGACTGGAACCACTTTCAACCTGACCGTGGTGGTCCGAGATAATGGAGAGCCATCGTTGTCAGCCTCTGTGGCCATTACAGTAGCTGTGGTGGATAGGGTTTCCAGAATCCTCCCTGACACTCAGAGACACGTGAAAAGTCCTCGGACATACTCTGAAATTACACTTTATCTCATAATAGCACTAAGCACAGTGTCTTTTATATTTCTTTTGACAATCATTGTTTTGAGCATCATCAAGTGCTACCGCTACACTGCGTATGGCACCACGTGCTGTGGAGGCTTCTGTGGAGTGAGGGAGAGGTGCCCTGCAGAACTCTACAAGCAGGCCAATAACAACATTGATGCCAGGATACCTCCTGGCCTCAAAGTGCAGCCTCACTTCATCGAAGTGCGAGGGAACGGCTCCCTCACCAAGACCTACTGCTACAAGGCCTGTCTGACAGCAGGCTCAGGGAGCGATACCTTCATGTTTTACAACACAGGGGCACAGACAGGACCGGGACCTGGGGGAGCCCAAGCAGCGGCAGGTGACAGCAGGCACCTCACAGGCCAAAGTGGGCAGAGTGCTGGGAACCTGATTATACTAAAAAATGAAGCTGTTTCTCAAAATGAGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAGGAATGCACAGCTCTGTGCACCTGGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGGGGACCCGATCAGCAGTGGCCAACAGTATCCAGTGCGACACCAGAACCAGAGGCAGGAGAGGTGTCCCCTCCAGTCGGGGCTGGTGTCAACAGCAACAGCTGGACCTTTAAATATGGACCAGGCAACCCCAAACAATCTGGTCCCGAACCTAAAAAGCAGACCCAAGTTTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGGCTGAAAGGTTTTGAGATTGAGCAGCTTGAGTGTCTGTGGCTACTGGGTATGTGTGGCCACCGGGGATAGGTGAGTGTCAGATGTTGGCTGGGATGGGCCAGGTTAGACTAGGAGGGTTGGGAAACAAAGGCAAATCAACAATGGGAAGGATGAAATGAAAAAGGACCAGACTTTCTAAATCTTTACAACTCAAGAGGTGGTGGCCACCCTCTAGCAGACAAAATTCCCTCCACTGACAAGGCTTTGGGAGTCCTTAAGTCTCTTGGCTGTGGTGTCATTATACCTAAAACCTGCATTTTTACCTACAAGCCTGTAGTTCAGTGTTCCATGGGGGGCCAACCAGGGCAACAGAAGCAGATCTGATGTGTTTCCTGTATATGTCCTTGTGCTCACTTTATTAAAAATTCTTTTGCACACAATGTTATGAAAAGGTCAGATCCTTTTCCAACAACACATATGCAAAAGCAAAAGAAAACCCCAACACCTCACTTTATGCTGTTTGTTGTTTGATAGATTTATTTAAAAAAGAGCAAATCTATAACTATAAATCTTTAAAGAGAAATATGATTAATACAACTCCCCTAAACTATCCTCGAAAGAGAATTCTGTCTACAGCCATTTAAATGATCATTGCTGCTACAGAAGTGCTTTAAGAGAATTGCCTGAAACATCTGTATTATACCGGCCACCTGCCAATCACAGCTTTACTCTTTCAGGTCACTCTGGGGCTGCCTCTTGCATGTATTAATTACTAAATAAAAGGATCTTTCTCTCTCTCTCTCTTTTCTAAAACACAATTATGTGCACTTTGAATACACAACCTTCTCTAGCCAACTCTATCAAGACCCAGAAATTGAAGAAAAATATTGTTTTCTCGTACATAACAGTGAGCAGACTTTTCAATCCTCGAATTCTGTGATTTGTCTTGGAGTGCTAGCCAACACCTTCTCTTTGGTTTAGTTTTCCTTTTCTATAACACTCTGAATTGCTAATCTTGCTAACACCTATGATATTACCTGAACTCAATCTCCCATATGTATGCTGTATGCTATTATAAGACTCCTGAAATATATTTACTCTGTGCTTGTGTATGTGAATGTTATTGCAACTATTACCTAGAGTGAACTTTAAGCTTTATTGTTGAATGTAATTCCATTATATTTCCTTTTGTACACCTGTGAAAAAAGTGGAGTAGTGTTTTTTTAACCATTGTTAATCAGCTTTTGTGTATGAAAGATACAGTAAAATTTCTTTCTTAAATCAAGATACTGGTGATTCAAGGAATTTTATTTGTGGTCAGCCAAGTGCCATCTCTTGCCAAGACTCTGGCTGGCAAGGGAATGGATAAAGCTGTTTTTTTCTAGTAACAATTCTGGAATACATACTGAAGATATTCCCTGAGGGTGTGTGCAAGCACAAAATTTACCAATTTGACCTCTTTGAAGTTGCAGAATGCTTTGAAATTCTAACAATACCTGGAATATCAGCTCATAGAAAATAATGAAATTTACTGCCAACCTTAAATAAGAAATTTTAATTTTGTTTAAATGTATGGTTTAAGAAGTTTGATGAACTATATTATCTTTTAAAAGTTAACATAAAAGAGGTAGGAGTCTGTTATTAAAGCAAAAGCATTAGACCTAAAAAAAAAACAAACCTGTTTTGTCTACTTTTAGCTTCATTCTCCCATTTTTTGAAGGGTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTATTGCTAACACATGTGAATCATTGCTACATTGTAGGTTGTGATCATTTTGCCCCACTGAAACCCATGTATCTGACCTTACGTGCCTTTTGAATACTAGGAGAATCGGGCTAATTTATTAATGATGATAATTATAATGTATGTGTACAGCACTTTTTACATTTGCAAAGTGCTTTCCAATCCATGTTAGTTACTAGTTATTACAGCTGTAAGGATAAAACACATCATGTGGATTCATTTTTGATTGGTGCTATTGGTATTTCCTCTGTATTGCTAATAAATGGAAAATGGTGGTATGAAAGAAAT EMBV3_32987 TCCACCACTCCCAGATATATTCTTAGACAGGTCCATACTTCTGCGAAGGCTTTGTAGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22940 ATGGGGCATTGTGTGAATCTGACTGACGAGGCTGTAGAAGCTGTCCTTACTTGCTGTCCT Gene GeneID:524465|AMN1:NM_001075858:8_cdna UTR3_Alt 2 NULL GeneID:524465 5 GENE AMN1 NULL antagonist of mitotic exit network 1 homolog (S. cerevisiae) EMBV3_35656 CTGGAGTTGACTGCGTGCGGGCGCTGATGAGAAATGGAGAATGGAGGGGGAAGCATTCCT Gene BVV0102_099555 + 1 EMBV3_02993 GK000020.2:24140819-24231606 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114837 1 XLOC_069366 NonCoding TCONS_00114837 XLOC_069366 NonCoding NonCoding LOC100847494 20:24195118-24221977 = TSS85542 1366 1 TCONS_00114837_1 34 0.0666178623718887 2 0.94921438677489 0 7.35610140171087e-06 0 0 0 0 0 0 0 0 0 0 0 0 1.55638453611865e-06 0 0 0 0.000204732966958841 5.26458916188196e-06 0 1.62972164356205e-05 0 0.000294546942360327 0 5.15774500669974e-06 0 0 0 0 NM_174010.3 CD36 Bos taurus CD36 molecule (thrombospondin receptor) (CD36), 1e-52 212 72.38 0.317715959004392 0 noncoding 0 0 0 0 -5.69025672391144e-05 0.999599670179554 -0.00771337631006368 0.876204376794305 GCGAGTTCTGCGCTGGAGTTGACTGCGTGCGGGCGCTGATGAGAAATGGAGAATGGAGGGGGAAGCATTCCTGGTGGAGCAGGCTAAGGACATAGCAAGAGCTGGGGTGTAAGAGGGATGTGATATGGCTCAAGCCCACCTCTGCCAACTCAGCATTCATGGGAACCCTGGTGTGATTGAAGTCTGGAGACCCAAGTCTTGGGATGCTGCTGTGTGACCAGCAAGAGGCTTCCTGTCTTGCTACCATCTCATCTCATTATTAGCAAGCTGCCTGGACGGCTGGGTTGCATTCAACCCCTCCTTGCATTTTCAGCAGGGCTTTGTCCATAACAGACATTCAGTATCAGTGGAGTTGAATCTTCAAGAGGGAGACTAGGGAAGTCTAACTTCAGTGCCCCAGTAGGGACTAGCAGTGGATTCAGAGGCAAGGCAGAAAGAGTCTTGAGAATTTATCAACCACTCTGCGTGAATGTGAGGAAGACTTACATGATTCTAGGTTCCTATGTCCAGGGGGGGAAATATTAAGAAGAGAGGTGGTTAGAATGGGATTGGTGTTAGGGGCATGATAAATTTGGAGTGCTAAAAAGTCATCAGGTGGCATTGTCCAGACACAGTTTAAAATTGTGGGAACTGGTACTTGAGAAAGAAGCCAATCAGAGATGTCCATTTGGGATTGTTCTTGCCCATCTTGTTGGCCGTGGCTTATAAATCATCCCCAAATTGATCACTCTTTCCTCTGACACTGTTACCCTGGTCCAAGCCACCCCGATTTTTTACAGATGTGTCTTACCAAGTGTTCTTCTTGTTCAGGCCTTTGGCCTGCTTCTGACCTGCCTGGACATTGCCCAGACTCCATGCCTGCCTGCAAGCACAAGTCAAAGTGAGTGGCCCTTAGAAGTCTTGAGCCCTTGGAAGTCTGGTCAACCCCTCAGGGTCTAACGAAATCCTATGACTCACAAGGTGAAACAAACAGCACTGTAAAAAGGTTAAAGTAAAACCAAAGCTGCATTTTTGGCTGAAAACTGATGATGGGATTATAAGCAGGAGCCCCAGAACTGCAATCTGAAGACTCACCCATGGAGTAGACACACTGCTCAGGACCTTTTCCCAGTGGGGACTGCAGATTGCTATTAATGAGGGACTTCCCAGCGCTATTCATCTCGATGTTGGTCGACCTAATTTTGTGATATCTGTGCTGTTACTGTTTTCTATTGTTTCTATTTTCCTTTTCTTTTAATGATTGTATACTTAAGTTAAATAATCCTCTATTAAATATTGAAATTGTTTATTCTGTGTATGTTGAGTAGTTTCTTTTGTTAACGAATCCTTCAAACCTAAAACAAAAATAAAACTTGCAGTAAAACAA EMBV3_01522 TCCTCCAGACCCACAAGCCCACAATGGCTTTCTCCACCCTGTCTGACTGTTCCAGTGACT Gene GeneID:780781|LOC780781:NM_001079639:56_cdna Constitutive 0 NULL GeneID:780781 1 GENE LOC780781 MGC139978 keratin associated protein EMBV3_29571 GGTCACTGTCTTTGCTATCAACATTCATCACCGTTCTTCCTCAACGCACGACGCTATGGC Gene GeneID:282177|CHRNA5:NM_174514:13_cdna Constitutive 0 NULL GeneID:282177 21 GENE CHRNA5 NULL cholinergic receptor, nicotinic, alpha 5 EMBV3_27049 CGACACCATTTTTATCAAAGTCATAGTGGATACTTCGGACCTGCCGGACCCCTGACGCGT Gene GeneID:506182|TRAF3:XM_002696842:671_cdna Constitutive 0 NULL GeneID:506182 21 GENE TRAF3 NULL TNF receptor-associated factor 3 EMBV3_09013 ACCTCATCCTCATCATGTGTAACTCTGTGATTGACCCTCTGATATACGCCTTCCGCAGCC Gene GeneID:507987|MC5R:NM_001015542:68_cdna Constitutive 0 NULL GeneID:507987 24 GENE MC5R MC5 melanocortin 5 receptor EMBV3_03778 CTAAGGGAAAGCTGGGGAAATCCTGGTGTTTGGACTCACCACCTTAGGCACTCAAAGTCC Gene BVT0102_111186 + 0 NULL GK000021.2:22056011-22060132 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118804 1 XLOC_072738 Coding TCONS_00118804 XLOC_072738 Coding Coding NGRN 21:22056267-22066207 j TSS89132 5607 2 TCONS_00118804_12 259 0.133583021223471 2 0.436059965791327 0.000674475138604379 0.000568722561188299 0.000378295087038681 0.000509833086048219 0.000672839956097563 0.000185143577498045 0.000617096080654894 0.000584180118221978 0.000223053454610102 4.2909921642084e-05 4.64163838262936e-06 3.57655581497701e-05 0.000419939504722657 0.000331836061204047 0.000121637866592189 0.00103200113335322 2.0568901341085e-05 0.000637728131619993 0.000746476412722168 0.000478932540279733 0.000693354822075592 0.000263519134366774 0.000195034264390923 0.000460000424840286 0.000907965842667043 0.00050248897516989 0.00106535612476617 6.98201026249719e-05 5.24789448320856e-05 0.000134281218533373 NR_028054.1 NGRN Bos taurus neugrin, neurite outgrowth associated (NGRN), transcript 0.0 3113 99.32 0.310326377742108 NR_028052.1 NGRN Homo sapiens neugrin, neurite outgrowth associated (NGRN), 0.0 994 75.20 0.245050829320492 TCONS_00118804_14 sp|Q2HJC0|NGRN_BOVIN NGRN_BOVIN Neugrin; 1e-149 422 98.14 0.995260663507109 0 coding 0 0 0 0 -0.128548557604298 0.285582922534126 0.0219867922753303 0.718172328738087 AGGACATATTTTGCCTACCTGGGCACCTCGAATTTTCCTCCAGCCCGAATGCTGAGCTAAGTGTTCTTCACATACATTATTTCATGTGAGAACAAGGTGTCCTCACAACTTGAGCGTTGCAGGTCCTTTGAATAGCCACATTTAGCAGATGAGATGGAGGCTGACAGAAGTTCAGTAACCCAAGATCAGGTAGCTCAAAAGTAGTGGAGTCAGGACGGCGACACAGGCAGTCAAGACACCATGAAGCTGAGCTGGGGCTGTGCACCTGTGACCATCATGTTAATAAAGTCTTGAGATGAGGCAGAATATGCATCACAACCCATTTCATAAGAAAGTTTAACCTCGAAATTCCTCAACATTTTGGTCACCCTCAACATGCCTGTTTTTGGCAATTGCAGTAATTTTAGCTCAGTGCCTCTCTCTACAAGCCTTTGCAAATACAGGCTCTAGAAACACCACTTATTTTGCTTTCTTACTCTCTGAAGGGAATGCAGTGACCATTATAGCAAAGTGGACTTTGAGTGCCTAAGGTGGTGAGTCCAAACACCAGGATTTCCCCAGCTTTCCCTTAGGGCTGATATTCAGAGGAAAGCCTTCTTCTGGCCCCAAATCTTTACATAAAAATTAAAAGATAGGTTTTCTTTATGATGGTACTTCTTAGCCATGTATACTTTGTCAATTGTCAAGAAAGGGATTTATGGAAGCCTTTTCTAAGCTTAAATATGGAACACTTAGGAGCTGCTTTGTACCCAGGGCCCTGGGCTTTGAGCACAGTAGGAATGTAAGAAGGGGTGATCCAGCTCAGGGCCTCTCCACCTCTTTGCTTGCTTTTTGTTTGTTTGTATGTTTGTTTCTTCTTTTTTGATGGAGGGTCTCTTGTCCTAAGGGGTGTTGGACTTGAGCTAATGGGAAACCTTGGAGAGTTTTAAATTGAGGGGTAACAAATTTGCATTTTAGCTGTGATGGATGGATGGATGGATCAAGGAGGGAAGACAGGGAATCCAGTTAAGATCCTGCTGAATGCTGGCAATTCAGGCAAGCAATGATGATAGTTTAGGTACTAGAACAAAATGTTTGTCTAAATAGTGAGAAAAGTGCGTCCTGCTAGGCAAGGGACTCCAAAACATTTTAAGGAGGAGGTAATAGAGTATCATATACTGAAGGAGGATCCAGAAATCTAGGAATCAGGAAATGTCCATGTCTTTTTAAAGGACAGAAAAATTGTAAGTGACCTTTAGATGTAGGCACATGGTAAAATCTTAAAGTGACAAATTTGGGCTGAGTTTGGTGGAAGTGGCAATCAGAAGTCAGAGTGGGCGCACCTCAGGAAGAGATGGCGATGGTGAAGGAGCAGTCTGATGAGCACCTGAAGGGCATGTGTGCTAATCACAGCTGTCCCTCCCAAGTGCCGAGACCGTCCAAGATGTGGTTACTAGAAGCACTGAAGGAAGGCAAGCAGATATTCGTCCTGAACACTGAGGTGGCCTAATTCCAGGGGCTTGGCCTGCGGGTTCAGGAAAGGATGGGAGTGGGACTTGTGTGAACTGGTGTGAAAAAAGAAGGATAAGTCCTGTCATGCACTGGGTCAGCTGTGGCAAGAATCCACTTTAGAGCGCAGTGCACTTGATTGCGCTTCCACTGCCAGCTCCAGGAGCAAGGAGGAGGTCCCAGAGGCCCAACAAAACCTGGGAAAGAGCAGGAGCCTGCCAAAGGGCCATCATGAGCCACCAGCTGAGTCTAGCACCGATAGGGCTCATAGGTCTTCAGCTCTATTTTTCAAAGTGAAGGTACCCCTAGTGCTCCCAGCAATTGCCCATCACAAAGAAAGCTCAGGTCATGGCCAGCTCAGCTCAGCTCCTGCACCCCAGAGTGCTGTATGGAGTGATGCTGGATGAGTGGGGCTTGTCAGCAAATCTAACATTGCACAGGCCCCCCCGCCACAGACCCCAAACCTAGTGGAAAACATCCCATTCTGTAGTGGACTGTTCTGTCCTTAAGGAACATCCCCTTAGAACACCACGAAGGTCCTTACCCCATCCTTCTCCCCTCCGAATCTAAGAGGATGGAGCTGAATACCTGGAAGGCCAGTGAATCAGAGGAAGGCTACAGTGAAGAAGAGGAATCTGAGGAGGAGTGTGTAAAAGGGGAAGCTGCCATCCCTTCTAATACTTTTCTGCAGGCACTCTCTAAGACTGACTACAATACATTTAGGAATGGAGTTCCTTTATACACTGTACGCAAGAAAATACCAAAGAAAATTGTAACCCCAGCTGAGCCAGATGTCTTAGAAGTTGGGAGGAGAAAGAGAAGGCAGAAACACAGGTAACTGTCCCCTGGACCCCCTCACTTGCCCAGCTCGAGAGTAACCCTCTGCCCTTCTGCAGTTGGGCGGGGAATCCAAAGTTTTCCCTTTAGCCTGGGAAAGAGGACAGGAAATACAAGAGATCGTTAGCCTTTTGGTACAATAAAATCCGGAACCATTTGGGCTGGCTTAATTTAGAATTTCAGCACATTTATATCATTCTGGTCTTTCCCAGGTGGTGCTACTGGTAATGAACCAGCCTGCCAATGCAGGAAACATGGGTTTGATCCTGAGTCTGGAACATCCATTGGTGGAGGACATGGCAACCCATGCCAGTATTCTTGCCTGGAGAATCCCAGCGAAAGAGGAGCCTGGAGGGCTACAGTCCATAATGTTGCAAAAACAGTTGGACACGACTGAAGCCACTTAGCATGCACGGTCTTTCCTTTAAGTGGCTTCTAGAGAAAATGAATCTGTGGGCTGTCTCTTCATCTGGGTGTCTGGTACCGCAGTTCCTTTTCTCTCTCTCCCTGATTTCTGCTCTTCCTCCATTCCAGAACCCTGGCCATCAGTCTGACCAACTTCAAGTATGAGAGTGAAGCACCAGCTCATCTCTCAAATGACTGGGCATCAGAGGATATTTAGGGTTGCAGTTTTCACTCTGACGATGGTTCTCGCAATTTGCTCCCAGCCCCTGGATCTCGTTCAGTTCAGTCACTCAGTCAAGTCCGACTCTTTGTGACTCAGTGGACTGCAGCATGCCAGGCTTCCCTGTCTATCACCAACTTCTGGAGCTTACTCAGACTCATGTTCATCGAGTCAGTGATGCCATCCAACCACCTCATCTTCTGTTGTCCCCTTCTTCTCCCGCCTTCAATCTTTCCCAGCATCAGGGCCTTTTCCAGTGAGTCAGTCCTTTGAATCAGGTGGCCCAAGTATTGGAGTTTCAGCTTCAGGATCAGTCCTTCCAATGAATATTCAGGGCTGATTAACTTTAGGGTTAACTGGTTTGATCTCCTTGCAGTCCAAGGAACTCGCAAGAGTCTTCTCCAACACCACAGTTCAAAAGGATCAATTCGTTAGGCTGACTTAACAACTTGTCTTCTCCGTCCTTCAAACCTTAGCCTGGATTTACCGCTAAATCTGTACTCTGGGTGCAGCCCTGGGCTAGAGGTCATCCAGGCGACAAGAAATCCGTTTCCCAGAGGAGTCCAGTTCCCATAGCTCGGGGCTGTCGCCATCAGAGAACCGCTGAGGGGACGCCCTTCCTGTGACCGTGGCGGAGGCAAGCCGGCCTGGGCAGCCCTTAGGGTAAAGGGGCGTCTCTTGGCCAATGAGCTCGTGTTTAAAATTTATCGCGTTTGGCAGGAGCGTCCTCTACCTCATTCCGGTTCCGGGAGTTGCAGGGAAAACACTCGCCCTCCCCGCGCCCCGTAGTTATTATCGGGAGGGCTGGGCCACCGAGCGGTTTAAACCCAAAAGCCACGCCCTCAGCCTGAAGCCGGAAAGAACCGCTACGTCCCCGAGCTTTCCCCCCCTGCGTACTTCCGGTTCAGTCCCTGGCTTCCGGTGCTGCCAGTCCGTGGGTCGTGAAGGGGGTTTTTGTAAACATGGCGTTTTCCCCGAACGTTTTGCTGGGCGGGCGTGTCTGCGCAGCGGTTGCTCGCAGTGGGTTTGCTACCCGGAGGGTGACCATCCCGGGCTCTACCAGCCGAGAGCCGGACCCCGATTTCGACTGGGAACCGGAGGAGCGAGAACTGCAGGAGGTGGAGAGGTACCGACTCCTTCCCGGGCCCTCAGCCTGAAGCAGGGCCTCGGTCTGGGCGCCCTTGTCCGCGCCCGGTTGGCGCTGGGCGTCCTGCAGCAGCCCTTCTCACCCGTTTTTAGGGACGCAGGGGCAGGTGTTAGATCCTTTGGGACCACAGGTCCTTTCACCAAGGACGTATTTCATCACCCGACTGAAGAATTCAGCAACAGCTTATGGGCTGCTGTTCTTGGTGTTAGACTTCTGGGGCGGTGTTCTGGCTGGCCGACATGGCCACGTAGTGTTTGCAAAGTGAAGTGCGCTGGACGCTCTGTGACTGACCCCAAGGCTCTTAAACCACCCATCTAGCGTCTATGCATGGTTTCTGCCATTGGTTCTCTCCCCCAGCGCCCTGAAACGACAGAAAAAAGCCATCCGGTTCCAGAAAATTCGAAGGCAAATGGAGGCGTCAGGTGCCCCACCCAGGACCCTGACGTGGGAAGCCATGGAGCAGATCCGGGAATTTTCAGAGTCTTGGTCAGTTCCCAGATTGGCTGAAGGCTTTGATGTCAGCACCGATGTGATCCGAAGGGTTTTAAAAAGCAAGTTCATACCCACATTGGAACAGAAACTGAAACAGGATCAAAAAGTGCTTAAGAAAATCGGACTTGCCCGTTCGATCCCGGAGCTCCCAGGCCCTGGAGATTCCTCCAAACCGCTTTCTGCAGGCCAGTCTGTATCAGGTTCTTTGCTGATTCCTGGGGATGAAGCCTCATCCAGAGGCCATGGTCACAGCACAGCTTTGAAAGCTATTGAATTGAATACTCAGAGTACAAATATAACAACGAGGCAGACGGAAAGGAATAAAGGAGTCCAGGGCCTGGAGGAGGGGAAGGACTTTGTGCCTGTTGCTGCAGGTCACCCTACCAGCACTTGTAGGGGCGCCAGAGGAATTGACAGTGATGGATTACCCAGTGACAAGAGGCTGGAAGAGCTGAAGGCAGGGGAGGCAGGTGACCAGATCTTCAGCAAGAGAGTCGTGCAGAGGGGACGAGAGTTCTTTGACAGCAATGGGAACTTCCTGTACAGAATCTGAGCTGGAGATGTGCCATGTGACACACAGCTGGGCGAGTATATTTGGTTCTGAAGCCTGGGTTTCTGTGTGTGGATTTCCACCTTGGAAGTGGGGGGGAACCATGAGCCTGGAATGTGGGATGAAAGGTTTGAATCTGACAAAGGGCAGAGGACTTCACAGGGCAGATGTGTCTGGGAGCAGGGCAGTGACCCGCCAGGTAGAGTCCAGCTTCCTGGAGCACAGCCCCTGCTCTGACCCACATGCATCGTCAGGATTCACCCTTCTCCCTTGGGCTGTGTGTGTGCTGAAAAACCTGTATTGCATGTGTTGTTACAAGTTTCTGTGATACTTGCAGTATATTTGGGAGGAGATTAAGTTTGTTTTCTCACCTCATTTACTTCTTGATTAATGAACACTTGACGGTTCTGGAACTGCTTAGTCAATTGGTTGTCCTCATTATGTGCAAAATAAAGCAAAATGAAGCAG EMBV3_20506 AAGGACCGCATTGAGGCACTGGGTGGCTTCGTGTCGCACATGGACTGCTGGAGGGTCAAC Gene GeneID:618210|PPM1F:XM_002694701:314_cdna Constitutive 0 NULL GeneID:618210 17 GENE PPM1F NULL protein phosphatase 1F (PP2C domain containing) EMBV3_16287 CCTAATGATTAGCACTAAATAATTGAATATAAAATGCTTTATTAATCAAACAAGTGCACT Gene GeneID:100295814|LOC100295814:XM_002685311:150_cdna Constitutive 2 NULL GeneID:100295814 2 GENE LOC100295814 NULL similar to homeobox D8 EMBV3_42194 GCGCCAGCTGTGCCCAGTGTGTGCTCAAGGACAAGGCCATTAAGAAGTTCATCATTCAAA Gene GeneID:100295837|LOC100295837:XM_002699401:424_cdna Constitutive 0 NULL GeneID:100295837 29 GENE LOC100295837 NULL similar to ribosomal protein S26 EMBV3_13131 TCAGGTTCATCGCAAATCTTGGGGAAGAGGCCCCATAGCATTCGGATCGATGGTGAACAT Gene BVV0102_436320 + 0 NULL GK000016.2:4135290-4144348 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14469 CTGGAGACCAGAAGGCTGTTTGTATGCTCCCCACATAAGGCAGCATGATTCTTTCCACCT Gene GeneID:100337263|LOC100337263:XM_002688248:149_cdna Constitutive 0 NULL GeneID:100337263 6 GENE LOC100337263 NULL TXK protein-like EMBV3_09863 GGCCAGAAACATCTTTGTCCATTTTCTCCATCGTACCTACCATATCACTTTCCAAGTGTG Gene GeneID:100140861|KLHL23:XM_002685284:76_cdna UTR3_Alt 2 NULL GeneID:100140861 2 GENE KLHL23 NULL kelch-like 23 (Drosophila) EMBV3_32341 CTTCACTGTTTTTTCTCCGTGGGGCACCGCTGGCATTTGGACAAGACCGTGCTTCATCAT Gene BVV0102_055173 + 1 EMBV3_36262 GK000023.2:8188238-8258749 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132180 TCONS_00132183 TCONS_00132181 TCONS_00132182 1 XLOC_080723 NonCoding TCONS_00132181 XLOC_080723 NonCoding NonCoding - 23:8190074-8194453 - TSS98949 3186 2 TCONS_00132181_1 189 0.208411801632141 3 0.272955687528552 0.000485383085587629 0.000885750055959852 0.000757857943131408 8.87951489607335e-05 0.000597904491543297 0.00022262187123887 0.000289707837637012 0.000365216109825776 0.00046766761018711 9.00610909560535e-05 1.46423460146769e-09 1.0476025887503e-06 0.000616596546638572 0.000188072947434641 0.000457327729553088 0 0 0.000118129218096706 0.00065296594150765 0.000866684682552732 5.27940329691092e-07 0 0 0 0.00055879375553133 0.000235994757348965 0.000406065763002257 4.89691070392966e-05 5.1403056980403e-05 1.5641500822906e-15 XM_580537.5 SLC16A12 PREDICTED: Bos taurus solute carrier family 16, member 12 (SLC16A12), mRNA. 4e-24 118 81.67 0.0373509102322662 0 noncoding 1 1 1 1 -0.06591939878112 0.669494256649795 0.0062632923125835 0.898460410306895 CTGGGGAAGCCAGGACCCAGTGACCTAGGGCTGGGGGTCAGTGCTCTGGGGAGGGCTGAAGATCTGTCAAATACAGGCAAGGGGCAGCTACACCCATGCAGACCCCTCAAGAGCACTCACACCTCCGTGAGAGTTGTCTGAGGCCTCTCCCAGGTGGCTCTGGGGAGTGAGGGGTGCTGTGGGGTGCTGGCTGCCAAGGCCAGTTCTAAGCAATTCAGACAAGAAAGAGCAGGAGTCCCAGCCCACCCTGCAGTCCTACTGCTGCCCTGCTGGAGGCCACGCTTGTCCCCCAGGGAGTCCTCAGTTTTAACATCTGTAAAATGGACGGGCTGGAATAAGACACAGTCCGGAGGCCATCCTGGCCCTGTGGGGCATTTCAGTCATCACCATGAAGGGAGGGAGTCAGCTACTAGCCTGCATCCAGGCAGGGACGTGGGCGGGACAGTCCATGATGAAGCACGGTCTTGTCCAAATGCCAGCGGTGCCCCACGGAGAAAAAACAGCGAAGGACAACACAGCGCGGTTTGCCAGGCACCAGGCAGGCACTCTGCCTACATCGGCTCAGCCAGGTCCAAAACAGCCAGGAAAGCTCAGCTCTGGGACAGCTGGAAGGGTCCCTCCCCAGGTGAACTCACCAGGACTGAGCAGGTGCGCCTGCCCACCCCCAGCCAGGGCCTGGGCCAGAAAGAACCACAAACCACAAACCGACAACCAGAAAAGCTGCTGCGATTTACTAAACTTCAATTTAGTTTTCACCGAGCTGCTTTTGCTTCTCCCAAAGCAAAAGAAGAAACAGACTTCTCTCAAACATGAAATAAAGGACAGCGACACAGGGAAGGACCCCGCACTTGGCTCCCAGGGGTGGGGAGCATCTTCTTCCCTCCCCGCTCCTCCCCACCTCCCCACCCTCTCAGGCTTCCGGCTCCTCTGCAGGCCAGCAGACCAGCCCCTAGGGTAGAGCCAGGAGAGCCAGGCCCAGAGAGGGTCCCGCAGGCTCCCCTGGGCCCCCAGCGCCCCCTCCCCACCTTCCTGAGCCTCCGGACCTGCGGTGGCCCCTCCCTCTCTGCTTGCCCCCATTCCCTCCAGCACCTGCCTGGGCTGGATTCACTTTGACCTCTGCAGTGCCTGGCCCAGCCCAGGTGCTTGGAGAACTCGGGGGACTGTGAATAGATACGTAGGATCGGGATTGAACCTCCTGAGCTGTTTAGATGCCTTGTGGCCCACATCTCACGTTTCCACGGAAGGAGGAGCTGGGGCTCCACTCCCCACAGGGAACCATGAGAGAGAACCTGAGGCCTCCCCCCTCCTTCCTCCACCGCCCACAGCCCCACCTGCGTGGGAGTCCGGGCCGAAATCACTGCACTGCAGGCCACTTCTGAGGCCCCCCTCTCTCCTGTCCCCCTGGGGAGCTGCAATGGCTGGTCAGAGGTGAGGTTTGCTAGACAGTCTCCTCTCAAATGGGCAAGGCCTAGACCCTGGGAGCAGGTCATCAGAAGTCCGTTCTACCCCAGCAGCACCAGCAACAAACCTCCACCTGTTTGAGTCCCTGGGAGAGGGGATGCTCTGCTAGCTTCCTCAAACCCCAGCAGCACAGCCCTCTCCCCACATGGACCACATCTGGGGGAACCACGTCCTCCTCACCTTGATGTCTCTGCGCCCCAGCCTGCACCACACCTCGTGTCCCCCACCCGGGTGTGGGGACGTGAACGGATGATCCCTGGGCCCTTCCCACCCTCCTCTCCCAGGTAATCTATTTCTAGATGAATAGAAAGGGCAGCCCTGCTCGCAGGCACTCGCCCAGGCTGAGCCATGTTCTAAGAGCAAGAAGGAGGCCACAGTGGGGGCGGGGGCCCTTTTCCTCCACGGTTAATGCCCTAAAGCCTCTCTCTGTACGTGGTTATCTGACACTGGTGAGCCTGGGAGCACGTCTGGGGCCACATGGACAGCATCACCTTCATCTCTGCATCCCCAGGGCCTGGCTCCAGGCTCAGAACACAGGCAATTCTCCATCAACAACCAAAGGCAGGTCCCTGCCCCGAGCCAGCGTAGCGCCACCCTCACCAGTGGGGACCCAGGGCAGGGGGCGGGGGGCAGCAGCAGCATTCCAGGTCCACAGAGTGGAACTCAGACCTTGCACTGAATTCTTGCAACTCGCTTATATGATCAGGTGTGAAACATAATCCCTGACCCTTCAGTTATGCAACATGCCATCCGAGTGTGTACCAAGTGTGTACTGAGCTCCCGCTGTGTGCCAGACTCTGCTCTTAGCACTGGGGAAATGCTGGGAGTGAAAACAGATACAGACACCTGCCCTGTTAAGCCCACATCCAGTGGTGGTGCAGGGGAGACAACAGATACATCTACACACAGATGGGGATCCAGGGCTTATGAAGAGACACAAGGCAGGTGAGAAGAAAGGAAATGGCCCGGCAGGGGCTTTGTGAAGGAAACGATAGTCAGGGAAGGCTTCTCAGAGGAGGTGGCATTTGAACAGAGACTAAAAACAGGAAGGGCATGAATCATGTATCTGAGAGAAAAGCATCCCAGGTAGAGTCCAGCAAGTGCAAAGGCCCTGAGGTGAGCATACAATTAGCAATCATTGTTCAAGGAACAGCAAGGAGGTCAGGATGACTGGACAGCAGTAGGAAGGCGGAGAAGCAGGAGAGGAGGTCGGGGGCGGGGCGGGGGGGCTCCAAGCACAAAGCCAAGCAAGGCCTGGTGGGCCACAGTATGGATAGAGAAAGCAGGGCCCACTTTGAGCACAGCAGCCAGGGACTCAGGACAAGAGAAACCACAGGCTCCATGCCAGCCACCCACTCAGGCCACAGCAGTTCACATCAGTTGGAGGGCTAAGCAAGCATATCTCATTGGCACTGGGGCCCACCAGTTCAGCCCAGAAAATGCCCAGCCTTTTTAAAAAAATTTTTTTGGCCATGCTGCACAGCATGTGGGATCTTAGTTTCCTGACCAGGAAGCAAACCTGCACCTCCTGCTTTAAAAATGCGGAGTCTTAACCACTGGACCACCAGGGAAGGCCCCAGAAAATGCCCAGCCTTGACTGTCCCCCTCTCCCAGGGCAGAGGTGCTAGCCACCAGCTCCTGCTTGCTCGGTGTCTCCTACTGCAGCGGCCCCCACCTCCATGCAAACCCTCAGACCTCTCCTTCCCACCTCAACCCCACCCCACC TCONS_00133898 TCONS_00133899 TCONS_00133900 r 5' 1463 TCONS_00133898 TCONS_00133899 TCONS_00133900 r 5' 1463 EMBV3_42931 CAGAATTAGATGAAGATGACCTCGAAGCAGGATGGAGTCCTGGTGGATGAATTTGGATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19332 GCTTTGAACGGGGAGCACTCAGCCACAAGTTGCACACCAGGAGCCTTAAGTTTCTCAACT Gene GeneID:100336402|LOC100336402:XM_002694383:215_cdna Constitutive 0 NULL GeneID:100336402 17 GENE LOC100336402 NULL testis-specific protein-like EMBV3_02430 GCTTGCCAATGAAGATTTAAAGACAGAGCAGGAGCTTCTTCCAGGAGTTCTAAGCCTTGG Gene GeneID:539573|MEIS2:XM_002690640:120_cdna Constitutive 0 NULL GeneID:539573 10 GENE MEIS2 MGC139739 Meis homeobox 2 EMBV3_04361 GCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAA Gene BVT0102_159270 - 1 EMBV3_10040 GK000001.2:35024719-35603048 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00010367 TCONS_00022064 TCONS_00214738 TCONS_00250553 TCONS_00098385 TCONS_00251853 TCONS_00165811 TCONS_00032587 TCONS_00141355 TCONS_00070841 TCONS_00031938 TCONS_00177994 TCONS_00141464 TCONS_00210178 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00200531 TCONS_00198662 TCONS_00088289 TCONS_00056147 TCONS_00073692 TCONS_00116799 TCONS_00089425 TCONS_00019991 TCONS_00189806 TCONS_00197973 TCONS_00207228 TCONS_00250544 TCONS_00239410 32 XLOC_131641 XLOC_142855 XLOC_005918 XLOC_012735 XLOC_130757 XLOC_153496 XLOC_058631 XLOC_154794 XLOC_100651 XLOC_018827 XLOC_085783 XLOC_042618 XLOC_018183 XLOC_107767 XLOC_085892 XLOC_128688 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_120316 XLOC_053076 XLOC_033950 XLOC_045454 XLOC_070965 XLOC_054210 XLOC_010669 XLOC_115843 XLOC_119632 XLOC_125746 XLOC_153487 XLOC_146076 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_12424 CATTCAGCTGGCAAAATGAGGAGATGGTGTCTGCCTTTCGTCTGCCATAGCGTGCCTAAC Gene BVV0102_256985 + 0 NULL GK000002.2:62433861-62457394 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09066 TTCAGATGTTACTTCCTCCAGAGGGTCTTCCCTCATTCACAAGTGGAAGCTGTCTCTGCC Gene GeneID:781011|LOC781011:NM_001105456:12_cdna Constitutive 0 NULL GeneID:781011 3 GENE LOC781011 MGC152580 hypothetical protein LOC781011 EMBV3_31213 CTGAGCACAGACTTAATTACTGCTCGGCCCTGCTCATTAGTGCCTCTGAAAGCCAGAGAA Gene BVV0102_203795 + 0 NULL GK000010.2:36193020-36264745 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016784 1 XLOC_008909 NonCoding TCONS_00016784 XLOC_008909 NonCoding NonCoding - 10:36252486-36253662 - TSS11634 926 1 TCONS_00016784_2 54 0.0885529157667387 2 0.213617021276596 0.000220394708786295 0.000282138210871214 0.000449708077933229 5.38066263297919e-05 1.59952476984471e-05 0 0 0 0.000110768556432154 0 0 0 0 2.03196550472348e-05 1.05965504125116e-05 0 0 0 8.51838955217576e-05 0.000147556366311351 0 0 0 0 0.000172089703863307 0 6.96011384176899e-05 6.22365658271958e-05 0 0 XM_005211556.1 C10H15orf57 PREDICTED: Bos taurus chromosome 10 open reading frame, human C15orf57 (C10H15orf57), transcript variant X1, mRNA. 9e-90 334 100.00 0.198704103671706 XM_005254753.1 C15orf57 PREDICTED: Homo sapiens chromosome 15 open reading frame 57 (C15orf57), transcript variant X1, mRNA. 1e-88 331 79.12 0.431965442764579 0 noncoding GGCCTCCTTCCTGTCTTCCTCCCTCTCCCGCCTCCTGGCTGGCTGCAGCTGTGTTGCCTGATGTGGAGCTGAGCACAGACTTAATTACTGCTCAGCCCTGCTCATTAGTGCCTCTGAAAGCCAGAGAAGCCCCGAGTTATGAAGTCCCCAGCACAGTGCAGGCCCAGGCCCCAGGTTTCCTGGGTGATCGCTAGACCCACTTCTTGTGGATTGGGTCTGTCTGACTTGGGCTCCCTTTGAGGGCCTCCTGTGGGAGATGTTCCTCCCTGGGATGGGAGAAGGGTTGGAGCTGGAGGGAGTGAAATGGAATAAAGAACTATGGAGCGCCTGAACACTGAACAAAAAAGGGAAGCTTGAAGGAAGGAGGAGAGGTTGGGTGGACCCTGGAAATTATAAACCCATAGACCTAGGTCTGTTACATGGGAAAACTTTACAAATATTAACTTGTAAACACCCTAGAAAATCAAATGAGATAATATACATGAAAGCACTTTAAAAAAATAAAACTTTAAAGGGCTATAGAAGTATAAGGTGTTATTATGAAATATTTCTGCTCAGGCAGACTGTAAACCAGATGCTTGGGGAGGCTGGAGATTTATGATAATGGCTCATCACCCACAAGGTACTCACACATCTTAGGCTGTTTCATTTAATTAGTCGTTGCCTCTCAGAGACTACTGCAGAAGCCTTCTAAGTGGCTTCCCACTCCACCTTCTTGCTTGTTCTGTTCATCTTATAACTCACTGCTGGGTTAATTTTCCTGATGCAAAGCTCTAATCCAGCATTTGCTATGCTTCCTCTGGCTGACAGTATAGGGCCTGGAGACTTTGGCTTAGCAGCCAGGATCCTCCATAATCTGGTTCTACCCAACTTTTCCAGCCTGATTTCCCTCCTTCCAGCCTGGCAGATGCAGGCTCAGGTCATTT TCONS_00016785 TCONS_00016786 TCONS_00016787 TCONS_00016788 TCONS_00016789 s 3' 11631 TCONS_00016785 TCONS_00016786 TCONS_00016787 TCONS_00016788 TCONS_00016789 s 3' 11082 EMBV3_20485 TCCCATCGGACCTCTTACCTTTCAGGCAGATTTGTAGCTTCGAAAAACAGGCTCACACGG Gene GeneID:614308|ATP4B:XM_002692000:113_cdna Constitutive 0 NULL GeneID:614308 12 GENE ATP4B NULL ATPase, H+/K+ exchanging, beta polypeptide EMBV3_24725 TTGACTGCACATTGCATGGTTCCTTATTCCTGTGGTGTTCCCTCGATGCAGACTATACAG Gene GeneID:317695|BSP3:NM_174840:80_cdna Constitutive 0 NULL GeneID:317695 18 GENE BSP3 SVS8 binder of sperm 3 EMBV3_31462 ATGAAGGAGAAGTCCAAGAATGCGGCCAAGACCAGGAGGGAGAAGGAAAATGGCGAGTTT Gene GeneID:100337405|LOC100337405:XM_002685166:170_cdna Constitutive 0 NULL GeneID:100337405 1 GENE LOC100337405 NULL single-minded homolog 2 long-like EMBV3_20988 ACCACCTACAGTGATATCCAGATGGCTGTTGCCAGTGTCTTCATCTTGGTTGTGCCACTC Gene GeneID:506486|LOC506486:XM_002697397:67_cdna Constitutive 0 NULL GeneID:506486 23 GENE LOC506486 NULL similar to putative olfactory receptor-like protein EMBV3_10663 CTCTCCAGCTCCATCTACACAAGCTGATGCTCTCTGTCCTGGCTGTTACCCATTGTCCAA Gene GeneID:510380|CYP2C19:NM_001109792:99_cdna Constitutive 0 NULL GeneID:510380 26 GENE CYP2C19 NULL cytochrome P450, family 2, subfamily C, polypeptide 19 EMBV3_39524 TGGTTTTAACAAAACACTTTTATTCTTGGGTTAGGACCCATGTTAAAACATAAAAATAAA Gene GeneID:535704|FKBP5:XM_002697201:80_cdna Constitutive 2 NULL GeneID:535704 23 GENE FKBP5 NULL FK506 binding protein 5 EMBV3_08170 CTTCTACTGAAGCCACTCTAGTCCAAGCCATGCCCTTTCCAGGACCACTTCAATAAATTC Gene BVT0102_065409 - 1 EMBV3_30918 GK000005.2:112367028-112510410 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11483 GACATAAACCGTGGGACTTCCCGAGTGTCCACAATGACTTATGGGAGAGCTGGTTTGTTC Gene GeneID:523294|GLT8D2:NM_001046266:1055_cdna Constitutive 0 NULL GeneID:523294 5 GENE GLT8D2 MGC137757 glycosyltransferase 8 domain containing 2 EMBV3_23648 AGCCCCCTCTTTGCCGAGGACCCCAAGAAGCACAGCCTGCTCCAAGGCTTCTATCAGTTT Gene GeneID:100336694|LOC100336694:XM_002692246:1521_cdna Constitutive 0 NULL GeneID:100336694 13 GENE LOC100336694 NULL regulator of telomere length-like EMBV3_07776 AGCAAAGCATGCCCCCGACGTGGTGCTGGATACCTTAGAACAAGTGAAAAACTCTCCCAC Gene GeneID:539452|SRGAP1:XM_002687549:552_cdna Constitutive 0 NULL GeneID:539452 5 GENE SRGAP1 NULL SLIT-ROBO Rho GTPase activating protein 1 EMBV3_09174 TTTGAGCTCTGCTGTGTATGTGCACTGAAGTGTCGGCAGTAATGAAGGGGACTGTGCTAG Gene BVT0102_343504 + 1 EMBV3_21529 GK000030.2:33801267-33906204 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10118 TCTCACAAGACTTTCAGGATCAAGCGATTCCTGGCCAAGAAACAAAAGCAGAATCGTCCC Gene GeneID:100294784|LOC100294784:XM_002700125:58_cdna Constitutive 0 NULL GeneID:100294784 X GENE LOC100294784 NULL similar to ribosomal protein L39 EMBV3_17484 ACGAGCACCTTTCTATTGTCTTCACTTGGATCGAGAACAAGTCTCCCCGCCCCACACCAA Gene GeneID:540135|PHLDA1:NM_001105631:14_cdna Constitutive 0 NULL GeneID:540135 5 GENE PHLDA1 MGC139356 pleckstrin homology-like domain, family A, member 1 EMBV3_38375 ATGTGTGGCTACAAAACTATCGACAAGGAGTTCCTGGGAGTGCTGCTGACATTCCTGTAC Variant GeneID:522371|TSPAN15:NM_001075829:329_cdna 655^771 1 EMBV3_08148 GeneID:522371 28 GENE TSPAN15 MGC139416 tetraspanin 15 EMBV3_29870 GCCATGCACAGGAATTGGTGGCAAAGCTTCGTTCTCTGCAGTTTGATCAACGAGAGTTCG Gene GeneID:541305|NR5A2:XM_002694274:286_cdna UTR3_Alt 2 NULL GeneID:541305 16 GENE NR5A2 NULL nuclear receptor subfamily 5, group A, member 2 EMBV3_21146 GTGTGCGTACTTCTTGGACAACAGGAATATGAAGACACTCAAGGACCCCAACCCGCGTGT Gene GeneID:785244|LOC785244:XM_002699841:43_cdna Constitutive 0 NULL GeneID:785244 X GENE LOC785244 NULL hypothetical LOC785244 EMBV3_11622 CCGTCGGACGCCGACCTCGACCGCGGGCTGCCCATCTGCCAGCAAGGCCAAGATTAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32537 CTCAGCCCTGAATTATTGGTGGAAGAAGGGATTCTGAAAGCATAAGGGACAATGAGAGGT Gene GeneID:538627|WNT16:NM_001014949:49_cdna Constitutive 0 NULL GeneID:538627 4 GENE WNT16 MGC139621 wingless-type MMTV integration site family, member 16 EMBV3_18265 GTGTGTGACCTGACGGTGGTGATGGAAAATGTAAGAAATTGAAGAGTTCTAAAGGCATTC Gene BVV0102_158435 + 0 NULL GK000030.2:48234091-48844179 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244318 TCONS_00244324 TCONS_00244325 TCONS_00244319 1 XLOC_150429 Coding TCONS_00244324 XLOC_150429 Coding Coding - X:48472637-48745261 - TSS183643 6293 1 TCONS_00244324_1 138 0.4293659621802 5 0.97693518155108 0.000705300823098378 2.05712624252863e-11 7.2558582205373e-08 0.000421028761161506 1.88610123945413e-18 4.02291884051259e-10 7.94587431866298e-05 0.000114185913023972 2.82557382244419e-07 5.593646409448e-06 3.87626427728313e-06 5.53346899691373e-05 4.09637456093491e-07 1.39876632784779e-07 3.31779792369011e-05 0.000162211672479095 0.00270517763197507 7.06793559680847e-05 0.000713003737812448 0.000342856550928826 0.000296480010848706 0.000176859636011012 0.00027721808313055 0.00168054041788168 0.000704521014822424 9.31035018890056e-07 6.04380078748619e-07 1.6716610307345e-05 4.65511459999895e-05 1.38621614445176e-07 XR_226570.1 LOC101909892 PREDICTED: Bos taurus uncharacterized LOC101909892 (LOC101909892), 0.0 4233 100.00 0.372795169235659 XM_005262093.1 DIAPH2 PREDICTED: Homo sapiens diaphanous-related formin 2 (DIAPH2), 0.0 1842 83.76 0.278086763070078 TCONS_00244324_1 sp|O60879|DIAP2_HUMAN DIAP2_HUMAN Protein diaphanous homolog 2; 2e-85 273 95.65 0.992753623188406 1 coding GATTACCATGAAGAAAGCTACAGCTTTACAAAGAGTGCCAGAGACCAGTATGAAAAACTACTCACCATGCACAACAACATGGTAAAGCTCTATGAGAATCTTGGAGAATACTTTATTTTTGACTCTAAGACTGTGAGCATAGAAGAATTCTTTGGTGATCTCAGCAACTTTCGAACTTTGTTCCTGGAAGCAGTGAAAGAAAACAACAAGAGAAAAGAACTGGAAGAGAAGACTAGGAGGGCAAAGCTTGCAAAAGAGAAAGCTGAACAAGAAAAGTTGGAACGCCAGAAGAAAAAGAAACAACTCATTGATATAAACAAAGAGGGTGATGAGACAGGCGTGATGGATAATCTTCTGGAAGCCCTGCAATCAGGGGCGGCATTCCGAGACCGCAGAAAGCGGATTCCAAGGAATCCAGACAACAGACGAGTACCTTTGGAAAGGTCACGGTCTCGCCACAATGGAGGTATCTCATCTAAGTGATTCCTGATGCCAAAGAATAAGAAAATATTTAAGTAAACAAAATCATACAGTTTGAGAAGAACAAAACCTACTCTCAAGGGATGGAGAGGAAATAAGTACATTTCTGCAAAGATCAAGCTAAGCTGGATGAAATAATGTGCATATATAAAGCTATTGCAAGACTCCTCCCACAGTTATACTAACACAAACACAATTGCCAGGATTTTAAAACATGCATTTCATTTTAGTGTGAAGATGTGTATTATTTGTTATTGTGTGTGACCTGACGGTGATGATGGAAAATGTAAGAAATTGAAGAGTTCTAAAGGCATTCAAAACCATTCAGTCTGTCAAAAATGTATAATGTTACTCAAATTTTGTCACACACCACCCTCCCAAAAAAAAGGAAGAAAAGAGAAAAGAAAGAATTCATTAATGTCTACTGATTGCTGTTAAATAGAAAAGTAAAAGACCAGTGAAAAGTATGCGTGTTAATGGTTTGGAAAGGCACTGATATTGCACACTCTGTAAAAGAAGCCATCTTGGAATCTCAGAAAATGTACTACTTCATCCCCTTCAAGTTATTTAGAATCTAATCTCAAGTGAAAGTTGATGGATTCATCTGCTTTGGCTGAAATTAAACTTAACATTAATCTAGAGTTTCAGCATGATATTGCAGGCACTTATCATTGCTAAAAATAAACCAAAGTTTAACAGAAGTGGTTAGAGAAAGTAATTTAAACTTTATTTAAAGAGGTATTTTATAAGTATACACATATATCTACTTTATACAAATACTTTGTATGGCTATTTTTGAGAAAAACCTCACATTTTAATGTTTATGCTAGAGTTGAACCTGCAAATTCTGTTACCTTTATTTAGATTTTTAAAGGTAAATATTGATCCCTGTTCTCCATGGTTTCTTTCTTCTCTCTATTGCTTCTTACTCCCACGACCCCCTTGAAGGCAGGGAATAGAGTTCTAAGAGACCTGAGAGGAAAAAGATTTCTCTCTGCAGGAGGCAGCATAAAACTCTCTGATACGTCAGTTGTCTTATCTGCCTCTTTCCTCCCCCTTTCCCATTCTGCCGTGGTGATCTGAAGAAGAAAAATGATATACTTTATATATGTGTAGATATTTATAATCCTGCTACAATAATTCCACATCCCAGTGACTAACTGAACTTCTCAATCATCATCATACTTAACTTACCTTATTATATTAACAAATCATTTAAATGCTGCCAAAACAACTCTAGGAGGAAAAACCAGGCTCTACATTTTTCTTAAATAGATGAGAGAGGAAAAGTCATACTTAACTTGTCTATTACTTTTTAAAATGCATTGAAAGAATGTAGTATAACTTCTCTGGAGTATAATTTTAAGACTAATCCATGCAGATGATTATGATTATTGTGAAAGTTTTCTTATAGGTATATTTCTTATATAGAAAATCCTATTTCTACTTCCTCTAAAGCACATTATAGATATTCAGAAAGAACAAATGACTGGCTTGGCAAATCACTACCTGAGATAATGAAAACAAGTGACCAATAGCTCACAGTTTCTTTTATACAGATGTATAGTCATTCAAACTGCTGCCTTTTCCTCCAGTTCATTCTTACTTAGGTCTTATCCTTTGCAAAGCTCTGAAGATGCTACAATAGAGAAATCAAAAACAGTAATAGAATCTGAGATTTTACAATTTTATCCTGTCTTAAGACACACACATATACACACACACAAAGAAGTTTAAGGGATATATCAATTTCACATGCTGTTTTGTAACAATAACAACAACAAACACTTAGGTTCTACTAATTTATGTAAATACTTAACATATTTTTAACTTCACAAAGTCTTTTCTGAAATCTTCATTGTATGGCTTCTTTGAGTCTTTTGATAGTTTTTCAGACTGTAGGAAAATGATATTTTGAAACATTCACCCTGACTAATATTTCGGGACATTTCCCATGCTATGTTATCAAGCTAGTCAAGGTAGAAATACTGTTGCATATCACCTTTTCCAGATGTGAACTTGCCTTATTTTTTAGTTTGTGGGGAAAAAAAAGTACAGTTATTGATAAATTATATATTTGTATTTAGAGTAATCCTACACACTTTTCACAAACATTGAGACCTTTCAGGGTCTTTCATGAAGTTCTGATAACTCAATTAAAGGGTTTGCTTCCCAGATTTATAATGATCCTGCCCTAGCCATTTGTAGTTTGTTTTGGGTTGAAAATTATCACCAGAAAAAAATGCATAATGACATTTTTAGTACAGAGTGTATAGAGTCAAATTATACTAAATCTTTTATTGGGTTTATTACTGCCATAATTGAGAAGCACCTTCCCTGGTGGCTAAGATGATAAAGAATCTGCCTGCAGTGCAAGAGACATGGGTTCCATCTCTGGGTCAGAAAGATCTCCTGGAGAAGGGAATGGCTATGCATTCCAGTAATCTTGCCTGGAGAATTCCATGGACAGAGGAGTCTGGTGGGCTACAGTCCATGGGGTTGAGAGCAAAACCACTCTTTGAGCTTCCCAGGTGGCTCTGATGGTAAAGAATCCACCTGCAGTACAGGAGACCTGGGTTCAATTTCTCCTGCTCCCCTGGAGAAGGCAATGGCTTCCCACTCCAGTGTTCTTGCCTGGAAAATCCCATGGACATAGGAGCCTGGTGGGCTACAGTCCATGGGGGTCGCAAAGAGTCAGACATGACTGAGCGACTAAGCACATACACACACAATTTATACAGATTTTCTTCAGTGTTTTTTAATAGTGCAAAACCCTTTAAAATGTTTACTAGTTGTATTAGTTTCCTTTGGCTGCTGTAATAAATTACCACAAACTAGGTGACCTAACATATCAAAAATTTATTCTCTCATGGTTGTTGTGGCCAGATGTCCAAAATCCAGGGCCATGCTCCCTCCAGAGGCTCTAGAGGAAAATTTTCCCTTGTCTCTTCCAACTTTGGGTGGCTATTGGCATTCCTTGGGTTATGGCCACATCTCTCTGTCTGCTCTGTCTTCACATTACCTTCTGATCTGTGTACTTAATCTCCCTATGGCTCTCTTATAAGGACACTTTTGTTGTAATTTCAAGCCCACTGAGATAATCCAGGATAATTTCATATGAAGAGCCTAAATTTAATTCCAAATAAGGTAACCTTCAAAGGTTCTGGGGATTAAAATATGGACATATCTTTTTGGAGGTGACCTTTAGCCCACTACAGTCTGCCTTCTGGACCCCCAAATTTATGTCTGTCCCCTGTGCAAAATATATTCACCCTACCCTAATATTCCCCAAAGTCTCAAACCTAAAGTTTAAACTCTCATCCAAACATCATCATTTCAAAAGTCCCAAATCTCATCTAGATCATCTAAATCAGCAACAGGTCAGAACCCTAGGGCAAAATTCCTTTGCATCTGTGAATCAGTGAAACATGACCTCAACAAGGCTCCTGCTTCCAAAATGCAGCAATAGGATAGGCATGTGATAATAGTTATAGACATTCCTATTCCAAAAGGAAAAAAATGGAACAAACATAGAAATGAGTTCCTTGTCCTGATGAGTTTCAGAATTTGGCCCGGCAGACTCCCTTTCCCTGGTGGCTCAGATGGTAAATGCAGGACACCTGGGTTGGAAAGGTTGCTCCCTAGTTGGGAAGATCTTCTGGAGGAGGGCATGGCAACGCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGCAGGGCTACAGTTCATGGGGTCGCCAAGAGTGAGACACGACTGAGCAACTAAGCACAGCACAGGACACAGGTCTGAGCACCATGTCTTGTGGCCTCAGCCAAGTGCCTGAGCTTCAGTTCTGTTCTCAGAATCCCCTTAGGTTTCAAGGCTTGACAATAATCCTCCTTGTCTCAGGGTTGCACCCTTTAGGTCTGCAGCTCTGCCCTAGAGTTGATCTTTTCTATCAAAGGGTAGTATCTGTTACAGCTTAATCAGCCTGTTTCTTGCCTGTAAAGTTTTGGTCGTCTGACAGCCTTCTCTCATTTTGTCCTGTCTCTGTCCCTTTCAGGCCAAGATGGAACTGTTTCTACTGGTATAACTTTTTAAAAAAACTTTGGGGCTCCTTATGAATATCATATTGATTTAATAGAGAGGCAAGAGAGTCCTCACAGATCTTTGCCAGATAATGCCACCTCTATTCCTGGCTTTTATCCAGATGAATGAGTGGATCAGTGAGTCAATGCCTAATCTCTACAGCACCAGCCAAAGGTTGCCTAGTCTTGGCTTTATCTCCAGAGCCCGCTATCCTAACAGTGAATCTCTTCATTTTAGCATCTTTTGCAATCTGAATAGGTAAAGAATTTCCTGAATTATCAAGTGCTGGTTCCTTTCTGCTCACCAGTTCTTTCTTCAATTTATCCCTTTCTCTTATATTTTACTATAAGCTCAAGAAAAATCTAGACCATACCTCCCATGCTTTGCTCTCACATTTCCTCAGCTAAATACCCAAATTTGTCACTTACAGATCTACTTTCCACAAGACAGTTGGAGACAATCTGGATAAGCTTTTTTGCCAGTATATAATAAAGATCACCTTTCCTCTAGTTTTCAATAAAATGTTCTTCAGCTCCTTCTGAGCCCTCATGAGAAGCACCTTTAACATTCACATTCTTCCCAACAGTCTGTTTAAAGCAACCTATGCTTTTTCTATCATATACATCAATATTCTTCCCACCTCTACACATGACGTAATTCCAAAGCCACTTCTACATTTTTAAGTATTTGTTATAGCAGTCCCTGACTTCCTGGTACCCAAATCTGTATTTTGTTGCTGTGGTTGCTGTAACAGAGTATTCCAAATGTGATCACTTAAAACAAGGCATTTATTCTCTTACTGTTTGGGAGGCCAGAAGTCCTAAACTGAGGTCTTGGCAAGGGCTGTACTCCCTCTGGAGCTTCTAGGAGAAACCTTCCTTGCTTCTCTCAGTTTGTGACTGTCATCATTCCTTGACTTGTGACCAAGCCTCTCTCTCCTCTATCTTCATATCACCTTTCCCTCTGTATATCTAATCTACCTCTACCACTTTCTTACAAAGATACTTGTGAAGGCATTTAAGGCCCATCAGCTTATACATAATCTCCTCATCTCAAGATCCTTCACTTAATTACATCTGTGAAGACGCTTTTCCCAAATAAGTTAACATCAAAGGTTCTAAGAATTGGGACGTGGACGTATCTTTGGGGAGTCACCATTCAGCTCACAACACTAGTTAGTGCACATAAATGTACTTTTCACTTTTTAAAATGCATCCTTGGTGCTCAAGTCCAATTCAGTGTTGTCTCTAAAAGCCATTGTATGCACAGGCTACTGCATGCTTTGATGTTAAATGGCTGAACAGTCTATTCTAAAATTCAGTTGACACTTTTCTTACTACAGCAAATTAGCTTGAAAAAATAATTAGTTCCAACTATGAGCTCTGGTGTATCTTTTCTGCCCCTTTTATGGAGTCTTTGACCAAATATTTTCTATGATTAATAATGTAGGTATAAAGCTACCTCTGATACAGAAGTGTTCTTTATAAGTTTATTTTAGATATCGTGAATCCCTTAACTGAAAGGAGAGGTGACAGGAAAGCCTATTTGAATGGATGCTGAGGGAGATTGTGCCCATACCAAGACAGTCAGTAGAAGTATTTCAGTAGCAGAACAATGGATTCATGTTCTCATTTTGCCTCACAATAAATGCCTGTCTCTTTGCAGGACCAAGAATGACTTGCAATCTATCTGTAATGCATACTTACTTATTCAATAAAGCTAAGATTACACAA TCONS_00246935 r 3' 98919 TCONS_00246935 r 3' 371542 EMBV3_09624 CAAGCCAGTGGGGGTTGGACAATGAATGTAGTTAACTGGTTCCTGCTCACACTCCAGAAT Gene GeneID:534122|NPEPPS:XM_002695921:292_cdna Constitutive 2 NULL GeneID:534122 19 GENE NPEPPS NULL aminopeptidase puromycin sensitive EMBV3_13269 AGTCTGTCTTAAAAAGGGGCACTGACTTTCACTTGAGACACAGCCAACTAAAGTGGTCTC Gene BVV0101_045213 + 0 NULL GK000012.2:41907599-42603885 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39361 TGACGAGGACTCCTCCATCAATTCTGCTGACTCCATCTACTTCCGAGAAGACCAGGATGC Gene GeneID:100336124|LOC100336124:XM_002696001:397_cdna Constitutive 0 NULL GeneID:100336124 19 GENE LOC100336124 NULL hCG1639864-like EMBV3_35615 TGGAGGGCTCTCAGCTCATGTGGCTTACCAAGTCTGGCAAAACTGTATGTAGACTGGAAC Gene GeneID:535064|LOC535064:XR_084153:57_cdna Constitutive 0 NULL GeneID:535064 X PSEUDO LOC535064 NULL similar to U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 (U2(RNU2) small nuclear RNA auxiliary factor 1-like 2) (CCCH type zinc finger, RNA-binding motif and serine/arginine rich protein 2) (Renal carcinoma an EMBV3_10842 TCATGTCTAGGCCTTTTTAATCAGACATCAGGCAGCCGCAGTGGGGACCTAGAAGGAGAA Gene BVT0102_333655 + 1 EMBV3_14185 GK000004.2:98866571-99016784 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24101 CGCCCAGAAGAAGTTAAAACTTGTGCGCACGTCTCCTACGGGGAGATGATTGGCTGTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23673 AATCTTAATGTCTAAGTGTTGGGTGGGAAGGTGGAGGGGTGTCTGTCCAGGTAGGCAAGA Gene GeneID:532018|TMEM86A:NM_001035388:31_cdna Constitutive 0 NULL GeneID:532018 29 GENE TMEM86A MGC127089 transmembrane protein 86A EMBV3_38252 TTCTTGAGTCTCACCATGTGCAGGGTTGCTCAGCTGACTTGTCTGTGGGAAGGGGAAAAA Gene BVV0102_383907 + 1 EMBV3_13289 GK000014.2:47461082-47779595 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33676 ACCAGAGTGGATTTCATATAAAGTGCGCAGTATTTAGGTCAGTTAACGTCCATACCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30685 AAGGCGAGAGACAGACCTAGCCAGTAATCAGTTCCCTAAATGTTCTCCACAGCCCAGAAC Gene BVV0102_143197 - 1 EMBV3_38805 GK000030.2:82294468-82351213 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023646 TCONS_00021036 TCONS_00251960 3 XLOC_014313 XLOC_011710 XLOC_154901 NonCoding TCONS_00023646 XLOC_014313 NonCoding NonCoding - 10:104108175-104109063 - TSS17536 888 3 TCONS_00023646_2 68 0.996621621621622 1 0 0 0 0 0 0 4.02821816122904e-07 0 0 0 0 0 4.29893868962395e-05 0 1.32431933609243e-06 2.02583360789158e-06 3.71784806495491e-06 0.00191013577704982 0.00122063614623734 0 3.50932343681453e-06 0 1.19380260028846e-06 0.000294436314721643 5.66374094866691e-05 0 9.91761517468598e-07 1.19499741920863e-05 4.44684141578623e-05 1.14804724406246e-05 1.12842431946245e-06 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 2e-22 111 68.22 0.402027027027027 0 noncoding GTTCCTCTTTATTGTGGAGGTTCCTCCTTGTGGGTGGGGTTGGATGAGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCAGTGTTCTGGTGGGTGGAGCTGGATCTCCTCTCTCTGGAGTGCAATTAAGTGTGCAGTAGTGAGTTTTGAGGTGTCTATGGGTTTGGTGTGATTTTTGGGCACCCCTATTTTAATGCTCAGGGTTATGTTCCTGCATTGTTGGAGAATTAGCTTGGTATGTCTTTCTCTGAAACTTGTTGGCTCTTGGGTAGAGCTTGGTTTCAGTGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCAACTGATGTTCCCTGGAGTCAGGAGTTTTCTGGAGTTCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGTCTCAAGACTTCTCTATCCATACAGCACTGATGATAAAACATCTAGGTTAATGGTGAAAAGATTCTCCACAGTGAGGGACACCCAGAGAGGTTCACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGGTGACCAGGAGGAGAAGAGGGGGAGTCAAAAGGAGAGAGACAGATCTAGCCAGTAATCAGTTCCCTAAATGTTCTCCACAGCCCAGAACACCCAAAAAGATTCACAGAGTTGGGTAGAGAAGAGAAGGGGGAGGGAGGAGATAAAGGTGACCTTGGGGAGAAAAAGGAGAGTCAAAAAGGGGGACAGAGCAATCAAGCCAGTAATCACACTCCTAAGTAAAAATGGGTACTGAAGATTGGATTCTTAAAGGTACAAAATTGATAACAAAAACCAAAAGGCAAAGATTAAAAATCTAGAGTAGAGGTTAGACTCTCAAAAATACAATATTAAA TCONS_00018597 . 5' 8990 TCONS_00018597 . 5' 8990 EMBV3_15325 TGGACAACTCCATCCTGACCGTGACCTTTGATACCGTCAGTGGCTCCGCCATGCTGCACA Gene GeneID:514566|PRDM15:XM_002685122:45_cdna Constitutive 0 NULL GeneID:514566 1 GENE PRDM15 NULL PR domain containing 15 EMBV3_25372 TCCCTGGAGAATTTTTACCCGCTCCCCAACCACCCCTCATCACTTCCAGAGCTAACATCA Gene GeneID:613530|LOC613530:XM_002686155:288_cdna Constitutive 0 NULL GeneID:613530 3 GENE LOC613530 NULL similar to Uncharacterized protein C1orf194 EMBV3_25658 CTAGGGCCATCCATGTTGCTGTAAACGGCATCATTTTCGTCTTTACTATGGCTGAGTAGT Gene GeneID:540815|ABI1:NM_001076241:151_cdna Constitutive 1 NULL GeneID:540815 13 GENE ABI1 MGC139877 abl-interactor 1 EMBV3_25441 TGCGGCTTCGACGACTCCGAAGTGGCCGTGAGTGACTATGAGAGCGTCGGGGAACTCAGC Gene GeneID:536281|FAT3:XM_002698997:38_cdna Constitutive 0 NULL GeneID:536281 29 GENE FAT3 NULL FAT tumor suppressor homolog 3 (Drosophila) EMBV3_33585 CTTTTTCTGTAAATTTAGACATTTGATGTCTTCCTAGTATGGCATAATGTCATGACTTAC Gene GeneID:281735|CXCL5:NM_174300:26_cdna Constitutive 0 NULL GeneID:281735 6 GENE CXCL5 CXCL6 SCYB6 chemokine (C-X-C motif) ligand 5 EMBV3_02365 CTACCCATGAAATTTTCCAGACAAGACTACTGGACTAGGGTGCTGTTTCCTACTCCGCGG Gene BVV0102_375908 - 1 EMBV3_30487 GK000002.2:62479266-62601166 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37947 GCAATACTCCTAGCTACTGGGAAGTAATCACAGCAAGCACTCAAAGCTTTTCAGTTATGC Gene GeneID:781056|GPR174:XM_002699956:18_cdna Constitutive 0 NULL GeneID:781056 X GENE GPR174 NULL G protein-coupled receptor 174 EMBV3_17833 GAGAAGCTATTACTGGGTAGCCTTAAATTGTTTCTTCATGTTTGTTTCGTGAAACGTGTG Gene GeneID:281817|HINT3:NM_174341:6_cdna Constitutive 0 NULL GeneID:281817 9 GENE HINT3 MGC134335 histidine triad nucleotide binding protein 3 EMBV3_18702 TACACCTATTGTCCTAAAGCACTGAAGACATGAAGCAGTCAACCGAGTCAGCGGATCGCC Gene BVT0102_052873 + 0 NULL GK000025.2:28532977-28537603 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145071 TCONS_00145073 TCONS_00145085 TCONS_00145079 TCONS_00145084 TCONS_00145087 TCONS_00145069 TCONS_00145082 TCONS_00145077 TCONS_00145083 TCONS_00145076 TCONS_00145074 1 XLOC_088731 Coding TCONS_00145076 XLOC_088731 Coding Coding RABGEF1 25:28482567-28534952 j TSS108798 3536 1 TCONS_00145076_4 356 0.0554298642533937 9 0.932670281001833 0.00223993010293001 0.00336395636704318 0.00408869517379947 4.5770952526654e-11 9.98474263361402e-09 0.00105589685291598 6.64825047285526e-08 1.90039444871606e-06 3.30475446196608e-07 1.82580154363341e-32 3.81520917372215e-05 2.39148499635699e-34 0.000251988185979241 1.1523434931038e-07 2.34130437120298e-20 1.43329203313499e-20 2.34101011016198e-66 1.46521563787206e-34 0.00341935560573226 0.00237088273548165 0.000902674558917042 2.60619522194031e-21 2.10932771341232e-52 3.44693627626124e-20 0.00305307832327212 0.00344391221718892 0.00198780667838132 5.91508899163015e-18 4.07213513983636e-05 3.78683409094568e-14 NM_174591.1 RABGEF1 Bos taurus RAB guanine nucleotide exchange factor (GEF) 1 (RABGEF1), mRNA. 0.0 2540 97.83 0.408371040723982 XM_005250277.1 RABGEF1 PREDICTED: Homo sapiens RAB guanine nucleotide exchange factor (GEF) 1 (RABGEF1), transcript variant X2, mRNA. 0.0 3018 79.30 0.967477375565611 TCONS_00145076_4 sp|O18973|RABX5_BOVIN RABX5_BOVIN Rab5 GDP/GTP exchange factor; 0.0 697 99.71 0.97752808988764 2 coding 0 1 0 0 0.123199517529584 0.583683258833811 -0.0380078055971425 0.558734975669262 GAGGGAGGGCCGGCGTGAGGGCGGGTTGTGGACAAGTACCGGCCACCTCCTCTAGCGACGCGCGGAGAGCGGCTGACCTGACGTCGGTGGAGCCGGAGGCGAGCAGGAGGAAGATGAGCCTTAAGTCTGAACGCCGAGGAATTCATGTGGATCAGTCGGAGCTCCTATGCAAGAAAGGATGTGGTTACTACGGCAACCCTGCTTGGCAGGGTTTCTGCTCCAAGTGCTGGAGAGAGGAGTACCACAAAGCCAGGCAGAAGCAGATTCAGGAGGACTGGGAACTGGCAGAGCGACTGCAGCGGGAGGAAGAAGAGGCCTTTGCCAGCAGTCAGAGCAGCCAAGGTGCCCAATCCCTCACATTTTCCAAGTTTGAAGAGAAGAAAACCAATGAGAAGACCCGCAAGGTTACCACAGTGAAGAAATTCTTCAGTGCTTCATCCAGGGTTGGAGCAAAGAAGGAAATTCAGGAAGCAAAAGCTCCCAGTCCTTCCATAAACCGGCAAACCAGCATTGAAACGGATAGAGTGTCTAAAGAGTTCATAGAATTTCTCAAGACCTTCCACAAGACAGGCCAAGAAATCTATAAGCAGACCAAGCTGTTTTTGGAAGCAATGCATTACAAAAGGGACTTAAGTATTGAGGAGCAGTCAGAGTGTACTCAGGATTTTTACCAGAATGTGGCTGAAAGAATGCAGACTCGTGGAAAAGTGCCTCCAGAAAGAGTTGAGAAGATAATGGATCAGATTGAAAAGTACATCATGACTCGTCTCTATAAATATGTGTTCTGTCCAGAAACTACTGATGATGAGAAGAAAGATCTTGCTATTCAGAAGAGGATCAGAGCCCTGCACTGGGTTACACCTCAGATGCTTTGTGTCCCTGTTAATGAAGAAATTCCAGAAGTGTCCGATATGGTGGTGAAAGCAATTACAGATATCATTGAGATGGATTCGAAACGTGTGCCCCGGGATAAGTTGGCCTGCATCACCAAGTGCAGCAAGCACATCTTCAATGCCATCAAGATCACCAAGAATGAGCCGGCTTCAGCCGACGACTTCTTACCCACACTCATCTACATTGTCTTGAAGGGCAACCCCCCACGCCTTCAGTCCAACATCCAGTACATCACCCGCTTCTGCAACCCAAGCCGACTGATGACGGTGCTGTGCCGTGGCTTTCATTGAGAAATTAGATGCTCAGTCTTTGAATTTAAGTCAGGAAGATTTTGATCGATACATGTCTGGCCAGACTTCTCCCAGGAAGCAGGAATCTGAGAATTGGTCTCCTGATGCGTGCTTAGGTGTGAAGCAGATGTATAAGAATTTGGACCTCCTGTCTCAGTTGAATGAACGACAGGAAAGGATTATGAATGAAGCCAAGAAACTTGAGAAAGACCTCATAGATTGGACGGATGGAATCGCAAAAGAGGTTCAAGACATTGTTGAGAAATACCCACTTGAAATTAGACCCCCAAATCAGTCTGTAGCAGCTATTGACTCTGAAAATGTTGAAAATGATAAACTTCCTCCACCGTTGCAACCTCAAGTTTATGCAGGATGATGAAAACTTAACATGGATAGTATTTATTTGAGCCTGAATTGTAGCCAGCCCTTCCTACAGTCCACTGATTGGGATCTAGAGTATAACTTAATTGCTTAGAAGTATCAGCATTTTTAAAGGTACAGTTTGTGGGGATTGTTTTGTTCGTTTTGTTTTGTTTTCCTGTCAGGGGAGGCTTAGTAAATAATAAAGTACTATTTATTGAGTCACTGAAATAGATTCATTTAAGGCCTATGTGAAAAGTTTGTCTATAAATCTATTTTTTCTCCATGGTTTTCCTATGCGCTTCCTCTGTGGCATTCACTGTGTTTTTGGATTTGATTAAATAATTGCCTTTTAAAGGAGAAAACGAATGCTACAAAAAATGTATGTGGTACCACTGTTCTACAGTTTGACATAATTTTATAATTGTAAAGATAGATATATTGCTAAGTAAATATGTAAAATTGTAAATATGTAAAAAAAAAAAAAAGAATGTTGTCCGTTGTGCATGGCATTTCATGTGTTAATTCCGTTTCTTTTTTTTTTTTTGGTTTGAAATGAAGTATATTGAATATTTGCCTTTTAACACCGTTTTATTTGGTTTGCCCCACTAAAATGAATGGAGAAATACTTAGACATACTCTCCCTAATATGTTGGCTCCACCTTTAACAATGTGTTAGCCCTAACTTTGAGGTCCTGTTCAGTCAGAGAACATGACACCATTGAATCACGTTTTCAGTCATGTGAAGTTACTATTCAGTACAGACTGGAGACTGAACCATGCTTCCAGCACCTCTGACCTCCTTCCATTCAGCAAATGTTCCCCGAGCTCTTGGTCAGGGCGGTTGCCCTGGGGCTGAGTCAGAAGTCAGGAATTAACAGGTCTCTGCAGGCGAGAGCTGATGGAACATCTCTCTGAGCTTTAAAGTGCAGAGGCAAGGGAGGGGGCGTCTCTGCTTCCATAGTGTACTTGTGACTTTATGGACAGCCCAGTCACATGTCACATAAGCCTCTTTCAGGATTTCTCAATGTCAGTACTATTTGGAGCCTGAGGACATTTTTATTTGGGTGCCAGCTCATGTATTGTGGAGTATTTAGTGATGTCCCTGGCCTCTGCACTCATTAGACACCAGTAGCAGCCCCCCAGTTGTGAAAAATCGTCTCCAGACATTGCCAAATGGGGGGCAGAATTGCCCCCAGTTAGGGACTGCTGATCTGTTTTGTAAGCAAAGGCGTTTTCCTCCTGATGGCTAATATGACGCAACCAAAGAAAATGGCACCAAATGTACAGTGAAATGTGAACTCAGAGCTCATTCGGTAAAGCTCTCCAGCCCCTGGCAGTGTGGAGCCTTGTCTAATCCTGGTGGAGCCTTTCACAACTAAATACACCATCGTGATTCTCCTTCCAATCAGTGATGTCTACAGACTCTCGGAGTACCTGGGAAATTGTAATTCCCAGGCACCATTTTTGCACAAGATCACATCACACAAGCAGTTAAGAAAGCTTCCTTTGCGTTTCCAGTATCTTCCTCCTGGTGTACCACAGATGCGTAGTGCAATAGTTTTGGAATAAAACTAGGGTGGGTATAAAACTCGTTACCCCTTACTTAAATTAACGTCTAAAATGCATCACGTTGATACACCTATTGTCCTAAAGCACTGAAGACATGAAGCAGTCAACCGAGTCAGCGGATCGCCAAGCTCACTTGGAGTATTACCATCAAGTGTCTGGAGAATGTGCTCATAGAAACCTGGGCCCAGATGGTCTTCGTAGAGAGCTTCCCCTTTTCTTTCTTTTCTATGTACTTTCTAGGTGCTAATCCAGGTATACATACACACTCTTACTTCTCCTGGGAATATACTGTTCTTTTAGTCATTGTACATTATGTTTATTAAATAAAATGTGCATATCGGCCTCCCCAAAAAAGCCGTCTTCTTTTGACTTCTTACCTGTGTATAAATTGTTTAATTGGTTTTTTTTAATATGTCTCGT EMBV3_02635 CCTAGGGACTTGGGCCTCTGAGCTCTCTTCTTCGGACAAGCGGTAATTGATGTTTATGAC Gene GeneID:505078|APOL3:NM_001100297:170_cdna UTR3_Alt 1 NULL GeneID:505078 5 GENE APOL3 NULL apolipoprotein L, 3 EMBV3_32258 GCTAGAGATTGCCAGTCAAGTTGGGGAGGTAGTCACACTGAGCTGTCGATACGAGACAAT Gene GeneID:789934|LOC789934:XM_002690606:90_cdna Constitutive 0 NULL GeneID:789934 10 GENE LOC789934 NULL similar to LOC407199 protein EMBV3_03906 ATTCAGTGGATGCACGTTCCTGGCCATTCGGGGTTTAGAGGCAATGAAGAGGCGGACAGA Gene GeneID:613354|RNASEH1:NM_001046505:19_cdna Constitutive 1 NULL GeneID:613354 8 GENE RNASEH1 MGC137747 ribonuclease H1 EMBV3_20145 AGCTGAGCGCTGCCGCCGAGGAGGGCCTGGTGCCAAGACCCGGCAGGGTGCTCTCGAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38029 CCCCATCCTAGTTCCTAGCCTCGTGGAAGTCTGTCTAATGCATCAATAGTAGATATAACG Gene GeneID:281137|EDN1:NM_181010:181_cdna Constitutive 0 NULL GeneID:281137 23 GENE EDN1 NULL endothelin 1 EMBV3_02488 TGCTGTCATGTTACTGGAAGGTGGAGCTAATCCAGACGCTAAGGACCATTATGAGGCCAC Gene GeneID:535414|PSMD10:NM_001046406:31_cdna Constitutive 0 NULL GeneID:535414 X GENE PSMD10 MGC137311 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 EMBV3_41073 CTCCTCAGATTCAGCGTATGCCCCCAACACAGAGCCACAGATTACATGCGTGAAGGTACA Gene GeneID:100295096|LOC100295096:XM_002697826:493_cdna Constitutive 0 NULL GeneID:100295096 24 GENE LOC100295096 NULL similar to histone cluster 1, H2bd EMBV3_11898 TAATAGAGTCTTACCCAGTTGGTGGGCTGTGGGCTTCATTTGCCAACTAGAGATTGGGGC Gene BVV0102_115169 + 0 NULL GK000008.2:86887518-86955754 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37195 AGGACCCAAACCAGGCAAAGAAACAGGAAGTGCTCATGGAGAAGACAGCCCCTGGAAAAG Gene GeneID:512445|ZNF187:NM_001101957:13_cdna UTR3_Alt 3 NULL GeneID:512445 23 GENE ZNF187 MGC151668 zinc finger protein 187 EMBV3_00245 CTATTTATGTGGCCCTTTCCTCCTGGATGTACCTGCCTGTGCGCAGTGAGCTGAGAGAAA Gene GeneID:784366|DLX3:NM_001081622:189_cdna Constitutive 0 NULL GeneID:784366 19 GENE DLX3 MGC143269 distal-less homeobox 3 EMBV3_30897 ATAAAGACATGTAGCAATAATGGGGCGAGGGTGATCTCACAGTGCCTTTGGAAGGGCCAG Gene NW_001492923.2:471292-469583 NULL 0 NULL NULL NULL GENE TIS11D ZFP36L2 PREDICTED: Bos taurus zinc finger protein 36, C3H type-like 2 (ZFP36L2), mRNA. EMBV3_06650 AGGTCTTGTAGGTCTTCATAGAACCGTTCAGCTTCGGCTTCTTCAGCACTACTGGTTGGG Gene BVT0102_442604 + 1 EMBV3_14201 GK000022.2:60581501-60590208 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00137171 TCONS_00039701 TCONS_00176610 TCONS_00039767 TCONS_00187603 TCONS_00208726 TCONS_00174335 TCONS_00055895 TCONS_00071076 TCONS_00039719 TCONS_00165870 TCONS_00233738 TCONS_00117105 TCONS_00011807 TCONS_00182156 TCONS_00081116 TCONS_00163589 TCONS_00186773 TCONS_00056519 TCONS_00006773 TCONS_00186044 TCONS_00058747 TCONS_00058748 TCONS_00203896 TCONS_00091562 TCONS_00182152 TCONS_00091999 TCONS_00110059 TCONS_00105203 TCONS_00131899 TCONS_00180787 TCONS_00034093 TCONS_00149642 TCONS_00006998 TCONS_00206965 TCONS_00230673 TCONS_00107343 TCONS_00203891 TCONS_00238496 TCONS_00163585 TCONS_00253923 TCONS_00136498 TCONS_00250286 TCONS_00108871 TCONS_00203890 TCONS_00111752 TCONS_00018605 TCONS_00028152 TCONS_00203889 TCONS_00126816 TCONS_00158297 TCONS_00087988 TCONS_00108979 TCONS_00124547 TCONS_00071191 TCONS_00018601 TCONS_00137884 TCONS_00100460 TCONS_00091512 TCONS_00180789 TCONS_00056840 TCONS_00091543 TCONS_00018602 TCONS_00022229 TCONS_00028150 TCONS_00089514 TCONS_00075204 TCONS_00221082 TCONS_00024277 TCONS_00248828 TCONS_00163588 TCONS_00252677 TCONS_00239426 TCONS_00200750 TCONS_00041066 TCONS_00107920 TCONS_00210711 TCONS_00182155 TCONS_00080878 68 XLOC_083381 XLOC_023518 XLOC_106384 XLOC_023584 XLOC_113648 XLOC_127238 XLOC_104585 XLOC_033703 XLOC_042849 XLOC_023536 XLOC_100710 XLOC_143219 XLOC_071271 XLOC_007357 XLOC_110780 XLOC_049996 XLOC_099945 XLOC_112825 XLOC_034322 XLOC_002335 XLOC_112097 XLOC_036183 XLOC_124292 XLOC_056336 XLOC_056767 XLOC_065963 XLOC_062522 XLOC_080604 XLOC_110477 XLOC_020326 XLOC_091516 XLOC_002560 XLOC_125485 XLOC_140163 XLOC_063254 XLOC_145163 XLOC_156861 XLOC_082709 XLOC_153229 XLOC_064776 XLOC_067652 XLOC_009289 XLOC_015421 XLOC_077503 XLOC_096751 XLOC_052776 XLOC_064884 XLOC_076093 XLOC_042963 XLOC_009288 XLOC_084093 XLOC_060703 XLOC_056286 XLOC_034643 XLOC_056317 XLOC_012900 XLOC_054298 XLOC_046513 XLOC_134398 XLOC_014466 XLOC_151771 XLOC_155618 XLOC_146092 XLOC_122401 XLOC_024877 XLOC_063830 XLOC_129221 XLOC_049760 Coding TCONS_00105203 XLOC_062522 Coding Coding LOC100847305 2:45170859-45293381 = TSS77702 1230 1 TCONS_00105203_2 409 0.739024390243902 4 0.989993552125758 0.00352309358209682 0.00246512610774076 0.00231035912831888 0.00226282635882002 0.00262760639119884 0.00141846111198753 0.00184749652443334 0.00179004253796293 0.00367015744601956 0.0024581621950068 0.00134813638484954 0.001627179530025 0.00134424711173414 0.00299990807889311 0.00197138997745074 0.00907475343178904 0.00523647370048956 0.00700710916814397 0.0034816868497431 0.00346290440644971 0.00117373233604373 0.00419228536899616 0.0029393098055352 0.0051770343522744 0.00264323969485498 0.00322267761944829 0.00287225488809856 0.00145119025480731 0.00178673153169831 0.00332221577106527 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 0.0 1077 94.39 0.564227642276423 TCONS_00105203_2 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 6e-169 491 69.30 0.819070904645477 2 coding ATGGCGATTGATAGTTCTGAGAGATCTGGGGCTAAAGAGGTGGTGCTGTGGTCAGTAGGTGCCCAATATGCTACTGGAGATCAGTGGAGAACTAACTCCAGAAAGAATGAAGGGATGGAGCCAAAGCAAAAACAATACCCAGCTGTGGATGTGACTGGTGATAGAAGCAAGGTCCAATGCTATAAAGAGCAATATTGCACAGGAACCTGTATTGTCAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAAGAGATGGCAAGAGTGAATGTCGACATTCTAGGCATCAGAGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTGAGAAGAAATGGAGTGGCCATCATGGTCAACAAAAGAGTCCGAATTGCAGTACTTGGATGCAATCTCAAAAACTACAGAATAATCTCTGCTCGTTTCCAAGGCAAACCATTCAATATCACAGTAATCCAAGTCTATGCCCCAACCAGTAATGCTGAAGAAGCTGAAGTTGAACGGTTCTATGAAGACCTACAAGATCTTTTAGAACTAACACCCAAAAAAGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGGAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAATATGGAATGAAGCAGGGCAAAGACTAATAGAGTTTTGCCAAGAAAATGCACTTGTCATAACAAACACCCTCTTCCAACAACACAAGAGAAGACTCTACACATGGACATCACCAGATGGTCAACACCGAAATCAGACTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGTTCAGACCATGAACTCCTTATTGCCAAATTCAGACTGAAATTGAAGAAAGTAGGGAAAACCACTAGACCATTCAGAAGAAATGTGATCTGCTATGACAGATTAAAAAGCCTATTGGCATGTAACAACCAGCAAAATCCTGATGTACTATTTAGCTACCCAACCAATACTTCACCTCTTTTGAAAATGAACTACAGGATACTGTTTGTTTCTCAGAGCATCTCAGGCTGGATACAACAGCAGGACGTGGGGATGGCAGAGGACAATGGAAGAACTATGGGGAATGTCACTGTAGACTATGGAGCTGTGAGTGATGACAGTCGTCACTACATCATGTGTGGCATTTAA EMBV3_34217 ATGGTCATCCTCTTCTACAGCTCAGTCTTTGCCAGCTACCTGAAGTCCCCGTCAGCTTCT Gene GeneID:785779|LOC785779:XM_002697408:99_cdna Constitutive 0 NULL GeneID:785779 23 GENE LOC785779 NULL similar to olfactory receptor Olr1722 EMBV3_06025 GTCAGATGGACACTCCTTGCAATTTGAGAACTGGCGCCCCAACCAGCCTGACAACTTCTT Gene GeneID:280985|ACAN:NM_173981:59_cdna Constitutive 0 NULL GeneID:280985 21 GENE ACAN AGC1 aggrecan EMBV3_22969 ACACTGTAGCTGGGGTGGAAGCCATTGTGAACATTCTGTCTGGGCGGTTTTGCTGGGGCA Gene BVT0102_052350 + 0 NULL GK000013.2:66038297-66263334 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046036 TCONS_00046037 1 XLOC_026600 NonCoding TCONS_00046036 XLOC_026600 NonCoding NonCoding - 13:66208292-66208971 - TSS33464 248 1 TCONS_00046036_1 70 2 0.63716814159292 0.00014870580022178 0.000729322201580896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.183314683288296 0.210183859581831 0.102404028950798 0.253773548371864 CCCAGGCTGGGTGCCCCAGCAAAACCGCCCAGACAGAATGTTCACAATGGCTTCCACCCCAGCTACAGTGATCCGCCAGCCGCTCCAGGAAGCACACAGTCTACGCCCTCCTTCACCTGATACCCACCGATGTATCCACGACAGTGGATGGTCACCATGTGATGGAGTATGGCCGTACCTCAGCCCAGCACAGGGTGAACACACCGTGCCATGTACACTCATCTCAGAGAGCAGGCATAACCCCCACT TCONS_00043640 r 5' 52166 TCONS_00043640 r 5' 51666 EMBV3_08772 CTTTTTGAAACATTGTGTGCTGATGGTCGTGGACTTGGGCAAACCCTGGGAGACAGTGAG Gene BVV0102_253232 + 0 NULL GK000015.2:84089532-84114200 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13064 CACTGAGCTGGATGGTGAGTCATTTGCCCTTCTGTGGCTCAAACGTGGTTCTCCATTCCT Gene GeneID:517412|LOC517412:XM_002693405:74_cdna Constitutive 0 NULL GeneID:517412 15 GENE LOC517412 NULL similar to olfactory receptor, family 52, subfamily I, member 2 EMBV3_38549 CACTCAATTCCCAAAAGTGGTTGTCTCTAGAAAGAAAGAGAGTAGAAGGGAAATGGGGCC Gene GeneID:790879|ZNF260:XM_002694953:86_cdna UTR3_Alt 1 NULL GeneID:790879 18 GENE ZNF260 NULL zinc finger protein 260 EMBV3_39379 GGAGAGAAGTTGTGTTCTGGCTAAACTCTGTAGAGGGCAGATTTACTACACTTAGAATAG Gene BVV0102_026808 + 0 NULL GK000030.2:79600681-79634384 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244754 TCONS_00244756 TCONS_00244755 TCONS_00244757 1 XLOC_150550 Coding TCONS_00244756 XLOC_150550 Coding Coding MAGT1 X:79554904-79604241 = TSS183886 3265 1 TCONS_00244756_3 335 0.063093415007657 10 0.934023836549376 2.15859832020325e-08 3.93898905717281e-11 5.67464626551072e-05 1.33365488922442e-08 0.000105899463772118 9.57744217037445e-12 0.000212732686426464 8.83119582749381e-12 3.71444766581324e-12 0.000685250146723236 0.000240315864982759 0.000395567813407348 3.74522121900506e-05 0.000270082210999393 7.00413449840291e-09 0.0143310380450067 0.00339633126391062 0.00528622216046897 2.25072738351839e-10 0.000357663662349778 3.08402416128628e-05 0.00425364180336968 0.003571237773629 0.00544580992929007 9.10322734823993e-09 0.000283337026671849 0.000125399172332923 0.000912219211511459 0.000309046302909815 0.000212510430494447 NM_001244318.1 MAGT1 Bos taurus magnesium transporter 1 (MAGT1), mRNA. 0.0 5889 100.00 0.999693721286371 XR_244477.1 MAGT1 PREDICTED: Homo sapiens magnesium transporter 1 (MAGT1), transcript 0.0 2087 86.16 0.541500765696784 TCONS_00244756_3 sp|Q9H0U3|MAGT1_HUMAN MAGT1_HUMAN Magnesium transporter protein 1; 0.0 677 97.31 0.997014925373134 1 coding 0 1 1 1 0.0243593892854826 0.847165260575647 -2.7993951645669e-05 0.999643754080384 CCCTTCTAGGCGGGAGAGAAGGCGAACATGGCAGCGCGTTGGTGGCGTTGGTGTGTCTGTGCAATCATGGCGGTGGCACTGCTGCTCGTTTTCGGGGTTCCCTCAGCCTCTGCCCAGAGAAAGAAGGAGATGGTGTTGTCTGAAAAGGTTAGTCAACTGATGGAATGGACCAATAAAAGGCCTGTAATAAGAATGAATGGAGACAAGTTCCGTCGCCTTGTTAAAGCCCCACCGAGAAACTACTCCGTTATTGTCATGTTCACTGCTCTCCAACTTCATAGACAATGTGTCGTGTGCAAGCAAGCTGATGAAGAATTCCAGATCCTTGCAAACTCCTGGCGATACTCCAGTGCATTTACCAACAGGATATTTTTTGCTATGGTGGATTTTGATGAAGGCTCTGATGTATTTCAGATGCTAAACATGAATTCAGCTCCAACTTTCATCAACTTTCCTGCAAAAGGGAAGCCCAAACGGGGTGATACATATGAGTTGCAGGTGCGTGGATTTTCAGCTGAGCAGATTGCCCGGTGGATTGCTGACAGAACTGATGTCAATATTAGAGTAATTAGACCCCCTAATTATGCTGGTCCCCTTATGTTGGGATTGCTTTTGGCTGTTATTGGTGGACTTGTGTATCTTCGAAGGAGCAATATGGAATTTCTCTTTAATAAAACTGGATGGGCTTTTGCCGCTCTGTGTTTTGTGCTTGCTATGACATCTGGTCAAATGTGGAACCATATAAGAGGACCACCATATGCTCATAAGAATCCCCACACAGGACATGTGAATTATATCCATGGAAGCAGCCAAGCTCAATTTGTAGCTGAAACACACATTGTTCTTCTGTTCAATGGTGGGGTTACCTTAGGGATGGTGCTTTTATGTGAAGCTGCTACATCTGACATGGATATTGGAAAGCGAAAGATAATGTGTGTGGCTGGTATTGGACTTGTTGTATTATTCTTCAGTTGGATGCTCTCTATTTTCAGATCAAAGTATCATGGATATCCATATAGCTTTCTGATGAGTTAAAAAGGATTCCGGAAATATGTAGACACTGGAGTAATGGAAATTGAAAAATGAAAAATATGTGTGTGAAAAGAAGAATGCAATTTATGTATTTTGGATTACCTCTTTTTTTCCCACATGATTAAAATAGTTAATCATTTAACCAAAGAAGATGTATAGTGCCTTAACAAGCAATTTTCATGAAGTATTTGGATACAATTCTTCTCTTAACCTTCCCTTCCCAGTAAACTTTCTGGAACATTTAATTTAGTGGAATTTTATAAAAAATTTAAAACTACTACATTTTAATTAGAACAAGGTTCAAAACTGTGTTGCTTAACTTTTGACCATGTGATTTTTTTATCTTATCCAAAGGTAGTTGGGACTTGTGACCAGGTGTCCTTGCATATGCCTGTTACTGATAACAGCGTCAGGAATCCATTCTTAGCTTTTCCAGTGTTGCATGGATGTGCATACTTCACACATCTTTCCTTTTAAGCAGAGAAATCATATATGCTATGTGTCTTCTGAAAATGGAACACCATTCTTCAGCGTACACATCTAGACTTTAGAAAAAGATCACTAGCCAGTCCTCCATCTTCCCTCCTGAAATTCTTTGCAGACTTTGTTTCTTGGTAGCTGTAGACATTAAGAAGTTTTCCTAAATACAGGATTATGATTTCTTCATGAGTGTGGTGTTAGCTGCCTGTATTTGGAACAATTTCAGGCTCATTCTGTTTCCCTAATTTATTTAAGATGAAAGTGAAGTTGCTCAGTCATATCCGACTCTTTGCGACCCCATGGACTGTAGCCTACCAGGTTCCACCGTCCATGGGATTTTTCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGAGATCTTCCCGACCCAGGGATTGAACCCAGGTCTCCTGCATTGTAGGCAGACACTTTACTGTCTGAGCCACCAGGGAAGTCCTTTATTTAAGATGGGCCCCTCTCTAATAAAAATGTAGCTTAGTATTAAAATCAGTGAAAATTTACAATTGACCAAAATGTTTCTGCAACTCAGAGATTATCACTTATTTCATTTGTACCTAAGAGAAAAAAATGGATTTATCTGGTTAAATCAATTTCTGTATTACAGTGACAACACATTTTATTAACCCTTGTGTTTAGGAAAAGGACTCCCCTAGATTGGGAAAATAAAATGATGAAATATTAAGTTGTTGCTTATGAATAGAAAGTAAATTTTTCTTGTAAACTGTTCTGTTTTCTTGCTATTATGTTAACCTTTGTCTTCTCACTTTATGTGGAGAAACAAAGTTATCATTTGAAGAAGTTCTGTTTGAATTTAATCTTTTTTCTGTCAATAAAAATAACCATATGTGCTAACCAAATTTCTGTGAAGAATGAAAGTTGATGGTTATCAGTAGATATAGCTATAATCTCCTCCATGGCTGTAAAGGGTATCCAGAAATGCCACTATTATAGAAATATGCAAATTCCAATTGTGAAGAAATTTTAAGAAATCTTAGAAGTATTACATTAAGATAATATTGTGACTGCCTGCTACTATTTACCATCTAATAACTCTCCCTCATGGTCTAGAAATCTTACATAATAGACGTTTAAAGAAAGAGATGATTATAGTTGCCTATGAAGAAATGTTCTATGTGGGGCTTTTGGTTTGTTTTTTTTTTAAGTAGATTTGGTGGGTGAGGTGATATTTACTCTCTACTGGAGCCCATTTTTGTTACTCCACTGTAAATTGCGTGATTCTGGATTCCTTATCTGCTGTTTTTGTACTTGTCTCAGGCCAAATAAATTTACGCTGTGATTCTTATGAGACTTGTATGAATATGCCCTGATTTGTACAGACTAACCAGGGGAATATTACTGCCATGTAACCTATAGCTCCAGATAATTTGCAATGAGCATTGAAGAATGACAGTTCTTTGTATTTTTTGTGTCTCTCTTAAGAGCACATTCTTCTTCTTTAAGGAGAGAAGTTGTGTTCTGGCTAAACTCTGTAGAGGGCAGATTTACTACACTTAGAATAGTGTTACTTTTGTGGAAATGTTGAAAGTAGCTTTCATCTGAAGTGCCTTAAGTAGATTCTTAAATTTACTTTTCTAGTATTGATTTAAATATTATTTGTTATGCATTTTAAAATACTATTCAAAATTATACATTGTAGTGGCAGAGATAAACAAATGTCTGGCTGTTTGCTTTTTGATCATATCAATAAACTTCTACAATCTAAA EMBV3_26660 ATCTATGCCCTCATCTTTCCTGGATGCTCCTGGCTGCCTGACTGGGCCTTGGTATTTGCT Gene GeneID:515889|TM6SF2:XM_002688520:90_cdna Constitutive 2 NULL GeneID:515889 7 GENE TM6SF2 NULL transmembrane 6 superfamily member 2 EMBV3_24980 CGCCGGTTACCGATCCGACTTAAGTTCCAGCTGCACGTCATTGACTCCTGGACCCAACTG Variant GeneID:614152|BRE:NM_001102274:216_cdna 60^211 3 EMBV3_37490 GeneID:614152 11 GENE BRE MGC165890 brain and reproductive organ-expressed (TNFRSF1A modulator) EMBV3_42205 ATGGTCAGCTCCTGTTGTGGCTCCGTCTGCTCTGACCAGAGCTGTGGCCGAAGTCTCTGC Gene GeneID:100141108|LOC100141108:XM_002695980:334_cdna Constitutive 0 NULL GeneID:100141108 19 GENE LOC100141108 NULL similar to keratin associated protein 4-7 EMBV3_01773 AACTTCTTCGAGAGATGCAGCAGATGGCCAGTCGTCCCTTTGCCTCTGTAAATGTCGCCT Gene GeneID:281017|ATRN:NM_173995:706_cdna Constitutive 0 NULL GeneID:281017 13 GENE ATRN NULL attractin EMBV3_05935 GCCATAAGGCTCTACTACCTTCTCTTTGCATTGCTCTTCTTGTTCTTGCTGCCTGTTCCA Gene GeneID:100296035|LOC100296035:XM_002698636:3_cdna Constitutive 0 NULL GeneID:100296035 27 GENE LOC100296035 NULL similar to defensin, beta 103A EMBV3_18744 CTCTGCCACCCTTAGGCTTGTTGAGGAGAAACCAACGTCTGTGTGACTCTGGCAGCCTGA Gene GeneID:493733|FOXH1:XM_002692542:157_cdna Constitutive 0 NULL GeneID:493733 14 GENE FOXH1 FAST1 forkhead box H1 EMBV3_02481 AAGAAAACGGCCTCTGAACAGGGACTGAAGGACACGTAGCTCTCGTTCCCGTCTATGAGT Gene BVT0102_246552 - 1 EMBV3_27391 GK000015.2:79087663-79117088 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062514 1 XLOC_037310 Coding TCONS_00062514 XLOC_037310 Coding Coding LOC100848717 15:79098933-79100129 = TSS46299 618 1 TCONS_00062514_2 180 4 0.486192468619247 0.00413895285228475 0.00278039047824929 0.00387829350208541 0.000595712584528809 0.00116638814771876 0.000607752164355822 0.00232136492185869 0.00266185947601381 0.00240023857542793 5.32620256229343e-05 1.1112563247255e-05 1.15717833586201e-05 0.00059738110279739 0.0019181363835329 0.000770064281305124 0.0105988406838293 0.00174619541500961 0.00527801655597462 0.00249474633224185 0.00481755712150596 0.0028245047759331 0.00126079348230941 0.00148447442367224 0.00303825547943867 0.00324000661781512 0.00224588551354985 0.00153588856610688 0.000248677441672012 1.57106825757641e-05 0.00075882769759173 XM_005194717.1 LOC100848717 PREDICTED: Bos taurus receptor-type tyrosine-protein phosphatase eta-like (LOC100848717), mRNA. 0.0 1110 100.00 0.993527508090615 XM_005253038.1 PTPRJ PREDICTED: Homo sapiens protein tyrosine phosphatase, receptor type, J (PTPRJ), transcript variant X1, mRNA. 5e-91 338 82.20 0.543689320388349 TCONS_00062514_2 sp|Q12913|PTPRJ_HUMAN PTPRJ_HUMAN Receptor-type tyrosine-protein phosphatase eta; 1e-52 184 79.46 0.616666666666667 0 coding 0 0 0 0 -0.173545915997162 0.294570806513643 -0.000432203185874461 0.993849827897553 ATGGCTGATCGGCCATCGGCAGATGTTTTGAGATTCACATATGGTGACTTCAAAAGGGGGGCCTCGAATACTTATGTGACATACCTCATAACGACAGAAGCAAAGAGACGTGCTCAGGGCTTGTCTGAAGTCTTGAAATACGAAGTTGATGTTGGCAACGAGTCCACCACGCACGGCTACTACAACGGGAAGCTGGAACCCCTGGGCTCCTATCGGGCTTGTGTGGCCGGCTTCACCAATATTGCCTTCAACCCTCGCAACGCGGGACTCATAGACGGGAACGAGAGCTACGTGTCCTTCAGTCCCTGTTCAGAGGCCGTTTTCTTGCCACAGGATCCAGAAGCTGAGCTGTCACTTGGCCATCAGGACCCAGCTCAGCTTCCTCTTCTGGCGTCCCCCCAGCCCCCGCCCGCCACGTCCCTCCTCCGAAGGCCCGTCGCACGTCCAGTCTGCACGCACTGTTTGCGCCTTTCTCTTCAGTGTAGTGGTTTGTGTGACCGTGTGCCGGACACACGCGCCCCTTTCAGCGCATGGAACTCTTGACTATTAGGATCAGAAGGAGCCATGGAAATCATCTTGTCGGATCCTCGTTTTATTTTTTAAAAATTTTATTGAAGT EMBV3_27004 GTCTGTTAAACCATCTGCCTTACCTCATCAAATGGGCCAGGTACACACTCTTCATTGTGC Gene GeneID:613886|PTPLB:NM_001130757:101_cdna Constitutive 1 NULL GeneID:613886 1 GENE PTPLB NULL protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b EMBV3_22786 TTCTTCTTCAAGCTCATCGGGGACACGCCCATCGACACCTTCCTCATGGAGATGCTGGAG Gene GeneID:507554|RXRA:XM_002691687:112_cdna Constitutive 0 NULL GeneID:507554 11 GENE RXRA NULL retinoid X receptor, alpha EMBV3_25227 GTGAGGAGGAACTAGCATTTGGGAATTAGACCTTTAAGATAACATGGTAAAGTCGGTGGT Gene BVT0102_194302 - 0 NULL GK000005.2:9062869-9153820 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193944 1 XLOC_117630 Coding TCONS_00193944 XLOC_117630 Coding Coding PAWR 5:9148423-9276918 = TSS144831 6735 1 TCONS_00193944_2 293 7 0.94763957850172 0.00171009681825982 0.00233559497624374 0.00141249868905186 0.00115328199174952 0.00154936417294301 0.000715775505085136 0.00167252467719257 0.00152806079757103 0.00366322084150998 0.00019605986819208 0.000117936168000747 0.00025810517470751 0.000690455311170067 0.000767779397650678 0.00166728297247045 0.00623448372859616 0.00368100684231693 0.00640972207815433 0.00161120920868711 0.00228318991667196 0.000968874170643304 0.00317012058538599 0.0034215677695855 0.00468650915220351 0.00205290107523659 0.00158281342436364 0.00169487640381935 0.000353052779368878 0.000227678506430209 0.000938275317703133 XM_002687175.3 PAWR PREDICTED: Bos taurus PRKC, apoptosis, WT1, regulator (PAWR), mRNA. 0.0 1.213e+04 99.96 0.99985152190052 NM_002583.2 PAWR Homo sapiens PRKC, apoptosis, WT1, regulator (PAWR), mRNA. 0.0 1572 84.93 0.213214550853749 TCONS_00193944_2 sp|Q96IZ0|PAWR_HUMAN PAWR_HUMAN PRKC apoptosis WT1 regulator protein; 1e-145 417 87.80 0.863481228668942 1 coding 0 0 0 0 0.0120040775266163 0.906732045282974 0.0107341463186655 0.854096155456107 ATGTGTGGCGGCCATGTGGAACAGGGCGTGACTGTGGATGTGCACACAGAAGACAAGGACCATGGCTTCGCCCGAGGAGCANNNGCCGCACCTGCCGCCCCCGGCCCCGGGGGCGTGAACTGCGCCGTGGGCCCCGCGCAGCTGAGCCGTGCCGCCCCCGGCCCGCGGCGGCCGGAGGACGAGTCCCCCCCCGCCGCCGCCGCCACTTCGGGGGCAGCGCCCGCCCGGGGCGGCGAGGAGGAGCGGGACTGCGCCCCTGAGAAGAGCAAGAGCTCGGGCCCCAGCGCCAGGAAAGGCAAAGGACAGATCGAGAAGAGGAAGCTGCGGGAGAAGCGGCGATCCACCGGCGTGGTCAACATCCCCGCCGCAGAGTGCTTAGATGAATATGAAGATGACGAAGCTGGGCAGAAAGAGCGGAAACGAGAAGATGCGATTACACAACAGAACACAATGCAAAATGAGGCTGTAAGCTTGTTAGATCCAGGAAGTTCTTACCTGCTACAAGAGCCATCTAGAACAGTTTCAGGCAGATACAAAAGCACAACCACCGCCTCTGAAGAAGATGTCTCAAGTAGATTTCCCCGAACAGATAGAAGTGGATTCAACAGGTATAACAGGGATGCAAATGCTTCAGGTAATTTGGTCTCAAGTAGCAGCACATTGGAAAAGAAAATTGAAGATCTTGAAAAGGAGGTGGTAAGAGAGAGGCAAGAAAACTTAAGACTTGTGAGACTAATGCAAGATAAAGAAGAAATGATTGGAAAACTCAAAGAAGAAATTGATTTGTTAAATAGAGACCTAGATGACATAGAAGATGAAAATGAACAACTAAAGCAGGAGAATAAAACTCTTTTGAAGGTTGTTGGGCAGCTAACAAGGTAGAAGATTCAAGGCTCAGTGTGGAAAAATATTTTAAAACTACTGAATGTTATGTTAATGCTAGGACAATATTCCTATCCTGTAATGCATTAAACTAACTATGTATATTTATTTCTAGAAAACAGTGGGTGTTTCTTTTCAAAATATTTCTTTGTCATTATCAGTTTCAAAAAGTATCAACCTTTTACTCCATGAATAAGTAACATCTTTTAGTTACTAAACTGGTAGGTTAGGCCTCTTTTGGTTTTGTGTGATATTCAAATACTATATGGTTTAAACTCACAACCATCTGAATATATTGCATGTATGGTAGTATGTTTTCCCCCTCGAAGAATATACTTAGTGTTTGTTTACATGAATTCAGATACTTTTGGGGGAATTACCTGCAAATGCCTTATTACTGATGTGTGCAACTTGTTATATGTTGATGATATTTCATAAAGGTCTTTGGCTACTGTCATTTTTTCTTTTAGCTTATTCTAAGCATTTAGAAGAACATGGAGTCACACTTTTATAACAGTCATCTTTAAAAAGGAAAGCTGAAAAAGTCACTTAATATCAAGTACTAGTTGGCTAAATATAAAATTGAAGAGAATACTTGAATTGTGCTATATAGTAAATTAAAATGTACTATTTTGTATTCAGATATTGAAAAAAATTTTAAATCACTTTGACTTTGGAAAAACATACAGTTGTAATTTTAATGTATAATTTCTTATGTAGGTACTCCTTTTTTTATAATTATTCCAAGGTTTATAAGTGAACATGGAATATTTTAAAGGTGGTTTATTCATCAAGCCTAAAAACTATATATAATTTCAGTGACTGTATAAGAAAAACAATTCATATTTTTAACTACATGCATTAGAATCAAACCAAAATATTTATCCACATTTAAAACATTTATATTTACAGTAACAAAGCAGTACATAAACAGAAATAGTACTGAAATATTTTGTTAGTTTCTGACTTGGCAGATAACACTGTGACACCGTTGTTCTCATATGAGAAAATTATTCCCCTACCTCAAATTTAAGGACTTTCCTCTTAACTTTGGATTTTTAAAAACAGAATTATTTTGAAGAATTATGAAAAATTTCTCTTTGATCAAATAATAATAGTATTTAGACTTGTTTTATGTTACGTTTTCATGTTGAGTAAAGAAATTGTCTCCTTTAAGATACATTAAGAATGGTCTGTCTGATGTTGAATCTCTAATAGTACAGCAGTTAATGTATGTAAATAGCTTGAATATAGTAAAATCCATTTTGGGTACCTACCGACTCTTCACTTGCTATGTCACTACATGATTCACTGTTAGAAGATAGGGAGGGAAATTGCAGAGTAAATGGTGAGTATCAGATGTTGAATTCTGAAACTCTCTTCAGTAGCCTAGATTGCACCCTCTTGCCTGCCACAGTCCCCCACTTCAGAAGTTCAGTCTTGAGTAATCATCAGAGTCACCTGGATTGCTTAAAAGGAGTTCCTAGGTTACCACTTCTAGGTAGGTTTAAGTTGAGACCTTGGATAGAATAAGCTCAACATGTGGTGATTTGGATCATAATTTCGATTTGCAGACAGCTCCTCGTGCCTCTTTCCCCCCATAACTTCCATTGGAATCACTGAAATTAACATAATTTTAGCTATCAGCATTATTTCACCCTTTAGTTTATTTAATAATTAACTTTGTCTCTGGAAAACTTCTCATATGTCCATATATATATATTTACCGAAAAGTTCATTGATAGATTACCAAACTTGATATAGTTGTAGAATTACTGCATAACGGCATCCTTTGGGAGAATATTCCCAGCGTGGGAGTAGTGGTTTGCTGCCCGCTTGTCAAAGTGGCGTGCCAGGCTCAGTCACTGGCTTTGGCTGGGAAGTCCTCATCTCCCTTTCTTTACCCTTGGATGTATGGCAGAAATATCAGTATTGCCTTGTTTCCCATCCGTAGTTTGGATATTGTGAAAATGCTGTCAGTATCCAGCTTTAAAATATATTAGTGTACTCATTCTCCAAATAAGAGAAGTATTTTGAATTTTTTGTTTAACCCATTGGGAAGTAAAGAAATATCTCATTTCCCTCTTTAAATTTATACCAGGTATTAATGCTTTTAAAGACCAAGCCGTTTAAAAATTTTCCCTTTATTTCAGTTTACCAGGAATGTTTGCAATGATGAACTTTTTACATAGTGGTACGTAGTACAGATGCAGGGAGGAGCCTGACCACTTTGGCAAAGCAGTTCATGTGCTGTCTTCCCTTCCATCCTTAAAATGTGCATATATATCACATACAGGTTTGACACTGAATGTTGAAACGCAAAGTAGGATCTGCTACAGGTTCCCTTTAAATTTTATAAAAAACATTGACATTTTTAAAAGGTTACTTAAATGTACACTATCTTAAAATACTTGACTGTTGTCAATAAAGTGTTAGTTTTTGTGAAATTATTAGTCCCATTCAGAAATATTTCTATATTTCCTGGAAATTTGTGGCATAATAAAGCATATCCAGAGTGTATGTGTTTATGATATTATTTTCCAAACAATAAGTTTATTATCTTTAGGATAGACATGACTTGCTTCCTTGATTTCTGGCATATATTAACTTGTGAATTACTGAAGTTATCGTTTCATCTTTCTAAAATTGTTACTGATTTTATTGCACTACATTTATCTTTAGAGAGGAAGAGGAAGGCTTTCTGGTGTGTATTTCTAAGGGAATTTACTAAATGTAAATAGCTTGTCAAACCTGCTCAAGTAGCTTATGACATAGAAAATTAAGCATCAGTAGATACCTGAAGCAGTGTATCTTTTAAAATAACTTTTTAATTCCAGTAGAAAGCAGTGTATTCCTAAAGGTGAAAATCCTACCTCAATTACATGTCGTTTATATTTTCTGGATTAATCTGGATTTTTATAATTAGAAACTAAGATGTAAGTTTTAAAGTCCACTAATACTTTGTGGAAAACAATGCAAGTCAATGTAGTAGAATGTCCATATGTTCAACACTGAAAGACACAATAGGAAGGACTTTGGGTTCAATGATCAATTGGATGTCCTAGACAATATTGCTATGTATAGTGATAGTCATCTTTCATATTTTTGTAATTCTTTGATCTTGACTCAGTACCTAGTAAGTTCATGCAGTATTGGCACTTATTTAATAACTACTCATAATGTTGTTAATAACCTGTTATAAGATTCAGGCATGTGTTTTCATCTTGCAACACAAGAAACAAACATACCAGCTTTTCACTGAGGAGAATTTATTAAGTGAGGAGGAACTAGCATTTGGGAATTAGACCTTTAAGATAACATGGTAAAGTCGGTGGTAAATGTTATTATATCTAAACCATTCCTAATATGTAACAATAAACTTTCTTTTGCACTGGAACTGTGCTCTCATGAACAAAGGACTTCCCATTGATTAGGATTGTAACTAGTATTACTTATCTGAGAACTAGTGACACTTTTCTTTTGTTGTTTTAATGAACTGAAGACATAGTACTAGTTAGACAGCAAATACTTTGCTTATCAAATCCTTCAACAAAGGCACTTCCCCCCATGCTGTTGGTTTTCTCACTGATGTATAGAAGTTGGTCTTTTGATTCTCAGTGTAGGCTTGAATTATTGCCCAAGAAAACCTGAGCCCACGTTGTTTTTTTTTAGTTTACTTAGCTAGAATCTCACAGCATATTAAAGTCATATCCCCACCCCCACCCCCAAATAATTATGTTTGAGTATGTAAAAAAGGTATGGTTACAGGGGTATGTTAAATTTTCATACTTACTCTTTTAGCAAGTATTTATTAGTCAACTGGGTATACAGTTCTAGATATTACAGAAGTTTCCAAAAAATGGACATGGACCAGCACTTATATCTAGAGTGTATAATCTGTAATGGTATATAAGTAGCAGTAGCTGGTCTAATCTGAATAGTTCATTCAAAAGTATTTTGTATTAATTATCCAGCCATTGTATTTAAGCTCTGGATAATAGGTACTGTTTAATTTGCTGCAGCATATACTGAATGGTGGAAAGACTGAACATATTGGGATGTATCTTTCCATGTTTCTTTCAGATAATTATATATTATGAAAAGAACATTTTAAAGCATTTGGAGCAGTAATGAAGTAAAAACAATTCAATGTATGTCAGATACACCCAACAGTTGATGCTATTCAAATGTGATTTTGTTAGTTTTTCTGTATACATTATTGATTACTGATTTGTTTTTAGGTATTTAAGTCTAATAAACAGTTCACATATTGGCAGTCACTTTGATAGTAATAGAATATTAGTGATGATCACTTGATGGACATTTATTACATGCTTGTTTTGTTTCCCCTTCTGCATGCCTGATAGATGTATATTACTTTTTTTTGGTGAACTTGTTTCTTGAAAGTTTTGACCATGCTATTCAGGGTGTTTAATGTTATGCTTTTCTTCTAAATTTAAGTCTAAGATGTCTGCTGTTACTAGTAAAGATCATATGAAAGCTAAAATTTACTGTTTTGTTGAAAAATCAGCTAATTCAGGTTATCCAATTATTTGTAGAGAAGCATCTGATAATTTATTGATCACTTTAGTATTGTGTAGACAACTCTCATAATTCTCATTGCATAGGTTTTTACTGGGGTAGTCAACATGATAAAGATTCACTTCTAATATGCTTTGCATGGAAAATAACAAATATTCAATAAAAAAGTAAATTTTCATTTAATTTTTAACACTGGTTAATTTTTTATTCTTTCCTCTACCATCAGTAAAACCCTGACCTTGAGTTTTATTTTCAAAGTTAAAGGACAGTGCTAATATTCTAATTAACTTTTGTGCCTCTTACTGAAACAATATGTAATACTTTAAAATCTTTAGAATATTATTGTAGCAGGAATTGTGTTCTAAAAGAAAAAAATATAGTATTAATAAATCTGAATATATTTGTGGTGGGGCTTTTTGAAATAGTGAGGAAGTGTACACATAATTGTCTTTGTTTTGAAACTACACAATAATTTCTTAATCCAAACTTGGATCTATCATCCACTAAGTCAGATGGTGGTCAAAGAATTTCAGGTCCCTTACAGTTAGAAAAGATAAGTAGAGATCTGGGAACGTAAAAATCCAGTCTGTTTGTTTGTTTGTTTGTTTTTTGTAAATGGTTTACAGAACCTTTTGCCTGATGTGTCATTCTTCATACACCTGCACGGGCTAATCGGTCTTTACTTCTAGAACTGTAGATTAATCTTCTCAGTAATGTCATAGATGTCTAACAAGTGAGCAGGCATCTTTCAGTCAGGCTGTTTAGATAATGTCTCAAGTCCTTATGTAAGAATGTGCTCCATTAGCAAGTTTATTAAAAAAATTTTGCAAAGTCTCCTAGTCTGCACTGGAACTGGAGCCCTTTATCTTAGATGTCATCAAATCCCACTCCCCCTTTTTTTTCTCTCTCTGTCTCTTCTAGATTCACTCAGTGGGTGCACACAATTCTATGAGTAGCTTTAAACTACCTACATAATTTTTTAATCTCATGCCTCTAGTTTTCTCTTCCCACTTCTACAAGAGGTTACATTTTATTTCTGGTCAGCTTCTTGGAAAGAACTATGTAATATTAAACCTTTATGTTAAAGAAACAGAAATAGTTATAATACCCTTTACAATCTCCCTCCTCCTTTTTTGGATGTCTAACCATATAAGGCTAAAAAGAAAGCAAAATGTATCTCTTAATTCTGGATCAAATGCATAATTCAGCTGTCACTTCCAAAAAACTACTGTGACTGAATAAAGATGCTTTTAATAAAGGAGAAAGCTACTTGGTGTCAGTTGAGCCATATGGGGAAAAAAAAAAAAAAAA EMBV3_20117 GACCCCTCCAGCAGTCTTCACCAGAATTTCCAGCTTCCTGCCCTGGATAAGGAGAACAAT Gene GeneID:509956|CTSG:XM_002696643:208_cdna Constitutive 0 NULL GeneID:509956 21 GENE CTSG NULL cathepsin G EMBV3_37991 CTCAGCTCCTACTTGGAGAAGAAAAGCGAGGCCGTTAATGAAGGAGAAGTTGAGCCAGGG Variant GeneID:506946|DTYMK:NM_001098893:17_cdna 207^259 4 EMBV3_26117 GeneID:506946 3 GENE DTYMK MGC148989 deoxythymidylate kinase (thymidylate kinase) EMBV3_25156 GGCCCCAGGAGGCCTCAGGAACAGATAGGTGTCTTCACATAAAGGAAAAATCCACCGAAA Gene GeneID:510821|SFRP2:NM_001034393:14_cdna Constitutive 0 NULL GeneID:510821 17 GENE SFRP2 MGC128911 secreted frizzled-related protein 2 EMBV3_22486 GGAGACAAAGAAAATCAACCCCACGGCTAGTCTGAAGGAAAGACTGCGTCAGAAGGAAGC Gene GeneID:786165|FMN1:XM_002690725:409_cdna Constitutive 0 NULL GeneID:786165 10 GENE FMN1 NULL formin 1 EMBV3_40271 GCTAATGTGGCTGTTTTGCAGTGAATGGGCTAATGTTGGTGTGTTAGACCTTGAGGTGTC Gene GeneID:530577|SACM1L:NM_001102131:134_cdna UTR3_Alt 3 NULL GeneID:530577 22 GENE SACM1L MGC159686 SAC1 suppressor of actin mutations 1-like (yeast) EMBV3_33250 ACGGGACCGGTGCTGGCCAAACTCCACCAGGTCGTGTACTACTCAGAAATGCACAAGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07825 CGCACCTGCTCTCTTACACACATCTGGAAAACCTTTGGCTCTCTGTGGTGGAATACCCTT Gene GeneID:539679|KPNA1:NM_001081733:83_cdna Constitutive 2 NULL GeneID:539679 1 GENE KPNA1 MGC152064 karyopherin alpha 1 (importin alpha 5) EMBV3_37934 GGTTCTGCCTGTCATGGGCAACTGACCCCGATCCAGAGGATTTCTTTCATCTTGAAGTTC Gene BVV0102_250851 - 1 EMBV3_17542 GK000013.2:60303718-60341016 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21322 CTTGATATGGAAGCAGCCACAGGACAGGAGGTTCTCAGTTGCTTCGGGAGTTGAAAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17183 TCATGACCATTGGAAACAAAGCAGACGGGATCCTGGTGGGAACAGATGGCAAGTACTCCT Gene GeneID:613915|PDZK1IP1:NM_001046521:289_cdna Constitutive 1 NULL GeneID:613915 3 GENE PDZK1IP1 MGC137241 PDZK1 interacting protein 1 EMBV3_06542 CCAAACAAGTACCAAAAACCCATCTGATGTCTGAAGAGGAGTGGAGGAGACTTGGTGTCC Gene GeneID:767985|CKS2:NM_001113319:5_cdna Constitutive 0 NULL GeneID:767985 8 GENE CKS2 MGC127509 CDC28 protein kinase regulatory subunit 2 EMBV3_13183 TGCAGAGAGGAAGTAACGCTGCCGGGAACGTGGGAGGGCAGAGCCTTATAGTTCTGCAGA Gene GeneID:615021|ZNF628:XM_002695382:227_cdna Constitutive 0 NULL GeneID:615021 18 GENE ZNF628 NULL zinc finger protein 628 EMBV3_14758 AGTACTGGTTTCTGTCCCCCTTAAAGATTTCCTTGGCTCAGGGGGTTCACACAGGCGGGT Gene BVV0102_204842 - 1 EMBV3_00606 GK000010.2:80970847-81017715 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35313 ATGACATGCTAGAGCGGGCGGTAGATTAGAGAGGGGACGTGTAGGCAAGTTCACTTCTTG Gene GeneID:282704|TBC1D1:NM_001166524:8_cdna UTR3_Alt 2 NULL GeneID:282704 6 GENE TBC1D1 NULL TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 EMBV3_05245 TTCTACAGATCTAGTTGAATATGTTGACAAATGATAGAAGAACAAATAAAAGCTCGGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14981 CACCGGCTGATCATGGGAAAGACAGACAAGGAAGAAATCCCTTTTGTGGAGACAATTTCC Gene GeneID:538608|NRIP3:NM_001102218:184_cdna UTR3_Alt 2 NULL GeneID:538608 15 GENE NRIP3 MGC148622 nuclear receptor interacting protein 3 EMBV3_41247 CATCGTCCGCTCGTGAGGTCCCTCTGGATCCCCCAGATTTGGATTCTACTCTTAAGTCAT Gene BVV0102_300206 + 0 NULL GK000010.2:65243458-65263282 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017574 TCONS_00017575 1 XLOC_009060 Coding TCONS_00017574 XLOC_009060 Coding Coding C10H15orf48 10:65243181-65246843 = TSS11975 644 1 TCONS_00017574_1 83 5 0.825457525266321 0.000549297236510802 0.000140426190444046 0.000554468993929235 0.000804062020073657 0.000665190974121385 0.000222176181086223 0.00117637271722125 0.000453477170038749 0.000370485781007874 0.000490420450655351 0.000131507616278379 0.000221364852002609 9.40378496833667e-05 2.21710007689288e-06 1.77916848880758e-06 0.00143524961093185 0 7.21535023568948e-09 0.000975543248562073 0.00120601562423554 0.000641080421434365 3.57132895950093e-06 0.000370381750623556 0.000312370801214686 0.000774798006761289 0.000600452452575784 0.000568108589171632 0.000387783924871641 0.000316558521456876 0.000606773033025353 NM_001206976.1 C10H15orf48 Bos taurus chromosome 10 open reading frame, human C15orf48 (C10H15orf48), mRNA. 0.0 1162 100.00 0.998447204968944 NM_197955.2 C15orf48 Homo sapiens chromosome 15 open reading frame 48 (C15orf48), 6e-166 587 80.84 0.992236024844721 TCONS_00017574_1 sp|Q9C002|NMES1_HUMAN NMES1_HUMAN Normal mucosa of esophagus-specific gene 1 protein; 3e-46 146 83.13 0.987951807228916 1 noncoding 0 0 0 0 -0.888352190000417 0.141234863255088 0.0111190787460908 0.812312402156826 AGGATTCGGTTCTGGGCGTTGGCATCGTCCGCTCGTGAGGTCCCTCTGGATCCCCCAGATTTGGATTCTACTCTTAAGTCATCATGGGCTTTTTCCAACTCCTGATGAAAAAGAAGGAACTTATTCCTTTGGTGTTTTTCATGACCGTGGCAGCTGCTGGAGCTTCGTCATTCGCTGTGTATTCCCTTCGAAAATCCGATGTGATCCTTGATCGAAAAAGAAATCCAGAACCTTGGGAAACTGTGGATCCTACTGTACCTACAAAGCTTGTAACAATCAACCAAGAATGGAAGCCCATTGAAGAGTTGCAGAAGGTCCGAAGGGCAACCAGGTGACCAGTCCTCGCCTTTTTCTTCCAAAGAGTACTCTATGAATCTAGTGGAAACACTTCTGCACAGGCTAGATTATGGATACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGGCCTGCCTACGTTTTTGGACTCTGGATAAGGAATTATAAAGGTAGCACAGCATAACCACATAGTCCCAAAATAAGACTCTGTGTTGTTTTGTGTATTGAAATTTTTGTGTTTATAATGCCTAAATGTTTTTGCCTATAAAGATTTGTTAAATTTGATTGTCTATAATAAAATACAATTTGTGCAAGATTTCTTAAA EMBV3_11192 GGTCCTCAGAGCCTCAGAAATGGCAGCTTGGGGCTGCAAATGAAATCAGATCTCTGCCTT Gene BVV0102_078979 - 1 EMBV3_04253 GK000010.2:13980373-13992196 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012718 TCONS_00012720 TCONS_00012712 TCONS_00012715 TCONS_00012713 TCONS_00012714 1 XLOC_007914 Coding TCONS_00012720 XLOC_007914 Coding Coding SMAD3 10:13879944-13984625 j TSS9592 5761 1 TCONS_00012720_4 320 9 0.94505158578525 0.001634647261765 0.000215226232976425 0.000862750835085722 0.0007912673382853 0.000713273398110633 5.45965396877504e-05 0.000756717837113532 0.000791381625434899 0.00105452516151123 9.39247485209241e-05 9.54368183965261e-05 9.3712479956624e-05 0.000397066891000494 0.000193875392060527 0.000234105760120665 8.9449384169905e-09 1.28647684449559e-13 3.31970133639573e-07 0.000927544109114249 0.00119127562466571 0.000328993454168086 5.8925062651086e-17 1.8727445700841e-15 9.94090781364687e-07 0.00126034293737215 0.000879896603127846 0.00106599066941563 7.89662468786302e-05 1.40747242924622e-51 4.20281510059515e-05 NM_001205805.1 SMAD3 Bos taurus SMAD family member 3 (SMAD3), mRNA. 0.0 1954 100.00 0.187814615518139 NM_001145103.1 SMAD3 Homo sapiens SMAD family member 3 (SMAD3), transcript variant 3, 0.0 2682 78.55 0.542093386564833 TCONS_00012720_4 sp|P84022|SMAD3_HUMAN SMAD3_HUMAN Mothers against decapentaplegic homolog 3; 0.0 671 99.69 0.996875 2 coding 0 0 0 0 0.0783968050194087 0.709628878194767 0.0595212812936919 0.275684596585949 ACAAGAGCAGCAGAGCTATGGGGCTGCGTGGTGGAAGCAGGCTCGAAGGAAACACACGCGGTATTTTGCTGCTTTTTCACACGTTGTAGTTGGGCACAGCTTTAGGAAGGCTGTTTCAGAACCCGCCCCACCTCCACAAACCAGGGAGCAGCTGTTCTGGGGCGGGGGTGGTGGAGGGGACTGGCACCCACTGCGGCTCACACCTGGGGTCTATCAGCACCCAGAAGCACATGGTATGGACCAGGTCGCTCAAACCTCTGTTGGGCATCCTTGTGTAACACAGAGCGCTCAGTGAACTGAGAAGGGCAAGCCCTTCCCCAGGGACCCTCAGCACTCGGCCCCACAGAGCTCCCGGGAAACCCCAGGAAACTCTGTGACCCACAGCACGGTCCTGAGCGTGAACAAGCCAACAACTTTCTCTTGCAAGGTCCCTGGATGGCCGGCTGCAGGTGTCCCACCGGAAGGGGCTCCCCCACGTCATCTACTGCCGCCTGTGGCGATGGCCCGACCTGCACAGCCACCACGAGCTGCGGGCCATGGAGCTGTGTGAGTTCGCCTTCAACATGAAGAAGGACGAGGTCTGCGTGAATCCCTACCACTATCAGAGGGTAGAGACCCCAGTTCTACCTCCTGTGTTGGTGCCCCGCCACACAGAGATCCCGGCCGAGTTCCCCCCGCTGGATGACTACAGCCATTCCATCCCCGAAAACACTAACTTCCCTGCCGGCATCGAGCCCCAGAGCAATATTCCAGAAACCCCACCCCCAGGCTACCTGAGTGAAGATGGAGAGACCAGTGACCACCAGATGAACCACAGCATGGATGCAGGTTCTCCAAACCTCTCCCCGAATCCGATGTCCCCAACACACAATAACTTGGACCTGCAGCCCGTCACCTACTGTGAGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGCTCAACCAGCGCGTCGGGGAGACATTCCACGCCTCCCAGCCGTCCATGACGGTGGATGGCTTCACCGACCCCTCCAACTCGGAGCGCTTCTGCCTGGGGCTGCTCTCCAACGTCAACCGGAACGCAGCTGTGGAGCTGACACGGAGGCATATCGGGCGGGGTGTGCGGCTGTACTACATTGGAGGGGAGGTCTTCGCAGAATGCCTCAGTGACAGCGCCATCTTTGTGCAGTCTCCCAACTGTAACCAGCGCTATGGCTGGCACCCAGCCACCGTCTGCAAGATTCCACCAGGATGCAACCTGAAGATCTTCAACAACCAGGAGTTTGCCGCCCTCTTGGCTCAGTCTGTCAACCAGGGCTTCGAGGCCGTGTACCAGCTGACCCGCATGTGCACCATTCGCATGAGCTTTGTCAAAGGCTGGGGAGCCGAGTACAGGAGACAAACTGTGACCAGCACCCCCTGCTGGATTGAGCTGCACCTGAATGGACCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGATGGGCTCCCCTAGCATCCGCTGCTCCAGCGTGTCTTAGGGACACTGCGAGTGAAGGGGGAGGGTAGGGAGGGTGGATTTGGGGAAGAGGGCCATGTAGGAGGTGGAGAAATCAGAACTCAACTCACTGGTGTCAAAAGAAGAAATTTTTCTCCCTCAACTAAAGTGGCATCAGCCTGTTTTCCAAAACACGAAAGCAAACCCAGAGGTGAATTTCTGTGAACAGCTGTCTGCTGAACACGGTGGCCCTTTGGCCCCAGTATGAAGGGTAAGAAATGGCTTCTGCTCTGGTGGCGTGAGCAAACAGGTAGTGTTTCACCACCTGCCCCTCCCCTGGTCCCCTTCTTTCTTAAAGACAGCAAACTGAGATGTCAGTGCCCAACAGGAACTGGCCCCCTGGTTAGGACTGGAGTGTGGACTTTGCCTTGGGTGCTCTGGGCAGGGAGAAGCTTGCAGGGGTCTGAGCACACCATGGGCCCAGCCCTCCCCTTCCACTGAATATTCCCAAACCCCAGCAGGAGCAGACCATGTACCTGGGCGCTGGATTGACTTGCGGCGGGGAAGGGGCTCGTCTGTCTCCACCTCTCTGAGCCTACTGATTGTGTCTAGAATCGAGCACATAGGGACCGGTGGCAAGGGGTGGAAAGACACCTCTTCTTTAAAAATGATCTTAAATTTGCCCTCATTTTCAGCAGTTGGCAGGATCTGTTGAGGCTCAGCACATACCCAACATACAGTTTGTATCATCATGTTAATCTCAAGAGAGATCCGAATCACGGGAAGTGTTCCCAGGAGGTAGCTGTCCATGAGGTGTGCAAGGGTGTCCGGTCACCTGTAAGAGCTCGCTCCGCTTTCTCATGCATTTGGCTGTATTGGTTGGTATAGTCAGTTGCGTTAATTAAATGAACTGTATCATATGGTCTTTTAAACATTTGATTTTTTAAAAAAACAAACACCCCGGGTGACACACTGACTGGGAAACCAGAGTGGGACCCAGCAACTTCTCTCCCAAAGTGAAGCTTTTTCCAGGTTTTGTTAAGACGACACCTGCCAGTACTTTTGGAAGCTGAAACTGACAAAAGCAAATTCACCAAGAGGGAAAGATCTCAGGCCGACAAAGAAATAAAAGGGCTATTAAAAAAAATTATTTTTACACCTTTGAAAACTGCAGAATTGGTGCCAAGAGGTCTGTCATCTTTCCCCTGAGGGATGAGATTATCTAGCTCACGGCAGAGGACCGGCAGTGACAACTCTAGCAGTTAGAATGTGTAGTAAGTATCGCTCCCGGTGGCAATTAGTGAGGAAACTACTATAGATTATTTCAACTGGAAAAAAAAGAGCCCCCTTATACTGACCTTTTGCAGAATGCAGCAGATGGAATTGTCACTTGCAATTGGTACTTTATTCTTTGCTGCTGTTTTTTGTATGAAATGAGTTATCCCATATTTTTTGCATGGTTTTCTACCAGGAAAAATAAAGGGATTTCCTATGGAAGTCCTGTATTATTCCAGGTGAAGGGAAGAAAGTTGTGTACTTTTGGCAGGTATAAACCTCAAATGTGATGACATTTGTGATGCTGTGTGGAGACACTGGGTGCTTCCTGGTGCCTTGCTCGCAGGACCCTAGGCCTCAGAAGCTCCAGCCCCGAAGTCCAGGTAGGAGGGCTGCTCACCATGCCTCCAGAGGACACAGCAGCAGGCAGGAGTGCCTTGCCAGACGTGGACTAGTGTTCACACAGGGCTGTTGTCAGAGTCCAGAGACACCACACAGCCCCTCACTCCACCTGAGGCCAGATGCTGTGGCTCTGAAGTTTCTGCCTGATGTGAAATGATCGTGGACTGCTTTTTACAGATACAAGAAATCATGTGAACCTCCTGGATGTGTGTTTCTGCCCCCGGTCAGGCCTGAGACTGGTGGTATGGCTTCTAACTTCAGTTTGGCCTAGGCTGGAGCCGTTGTGGTGCCCCTACTAAAAGCCACGGGGAGCAGTCTCCAGGGGCCCGTCATCTCCTGAGAGCACTCCCTATGGCACACAGCTGTCCTCCAGGTACTTGGGAGCTGGCTTCAGGTACAGCCCAATTTGGGTGATCTGGTTGGTCATGTCTGGTTGCATCTGGATGGCGTCTTAGAACCCACAATGCTGAAAGCTAAAGAATCTTTGTAGTAGGCATGGAGTTTTTGTGTTTTTTTTTCCCTAAAGCTACTTACTTGGCCTTTTTTCTTTATAACTAGACTGCTAAAGGAAGACGGGTGAGGAAAAAGTGGGTAAGACCACGTTCAGCACCCTTCAAAAGAAAATTTGGTTGTACCTAGAGGTTAGGATCTGGTTTCATTCCCATCATAGAGGCTGCGTAAGTGGCTTTGAGGCATGTGTGATATTAGTGTCCTACAAGTCATAAAAAGTAGTTTTAAAACCCTATTGCATAAAGGCATTTATACATTGAAAGACAGGACAGGTGAAGGGGCAGGAGGAGGGCGGTTCTCGGGGTGATGGCAGCTGCTGGAGGGTGCTTTTGGTGTCACTGCCCAGGCTGCAGGACATGCCTGCTCCCCGGCCCCGGGCTCCCCGCCAGGCCGCCCTCACCTTGCGGCTTGCGGCGATGCTGACCCGGGTGTGGCTACAGCGCAGGGGCCCTAGGTCCTGGCCTTGGCACCTCCCCTGGGAGCCAGCTTCTGTTCCCTTTCCTCTCCTCCCACACCCTCCCCACTCCTAACTTTATTTAGTACTGGGAGCCTTCCAGCGCAAGTAGGTAGCCGCCCTGGCAGTTCGGGTTACAGGCCTGTGCTGGCACGTCATCTCCACTGGCCACCTTCCTGGCAGGCTGCAGACCTGACATTTTGAGACAAACCCAGAGTCAGGAGCGGGGACTTTGACTCTTAGGAGGAACAGACAGCAGGGCAAGGCTGCTGGCAGACTCTTCCATTGTCCTTATGTTGTCTGTGAGGTTTTTTTTTAATCGTCCGTGGTGATTATTTTTTTAAATCATTGTTAACGTATTGGAATGAGCTGTAGCACATATCTTGTGCTTCAGTTTGTTTTTCTCCATCTCCCTCTGGCTTCCCGGAGTTTGGACATATTCCAGGGCTAAATGCTTTTACTCAAACCGCAGAAAAAAGTTTTCTTGAAGTAATGCGTGCATGTCATGCATGCATGCGAGTCATTTGGGGAGAAGGCAGAGATCTGATTTCATTTGCAGCCCCAAGCTGCCATTTCTGAGGCTCTGAGGACCTCTGCAGGGCCAGAGCTCCCATTAGGCCACTCTCTGTAGTCTGTAAGAGAAGGGAGGGACAGGAATTGGCATGCGCTCCTAGGACTGTTTATCAAGGGGGTTACCAGTAGCGAGAGGGTGCATGTTTGGTTCTGAACCCTGTATCTCACTGTGACTTCAAGTGGCAGAGTTGGGAGTTTTCTCCCTAATCTACATCTTTGCTAGAAGAAAACCTCAACATAGTCACTCTGGTATGGTATAGATGTTCCCTTCTAGAACCTTCCTTCAAGTAACAGTCTTTGAGGAGTATCCGCCACTTCTCAAGTGGGTAGGAAAGCAGAAAAATGTATGGATCAAAACTGAAGAGGCCTCTCTGATGGGAGAGTGGGGAGATGACTTGCTATACAAGCAACCTTTCAGAAACACGGCTATCACAAAGAAAAACTCATGTATTGTGTAAACTGGATTGAGAAATTCTCTCAAGTGATCCTGTAATTTTTTTTTATGCTGAAGTAATGTACACTCGAGCATTCTGGTGTTTTTATATTTATGTAATAATTTCTTAAAACCAAGACAGATAACTATTTAATTTTGGAAGAAAGTTGGAAACGGCTCTCCTCCCGAGGACAGTGGCTTGGCCCCCAGAGCCACCAACCCAGGCTGGCTCCCTGTGTGGCAGCATGTGAACACAGGCAGCTAGCTCAGGCCAACGCAGGCCCGTCCACAGGGGCCTCTGAACCCAGCCCCTCTCCCTTCCCAGGGGCGAGAACTGTACAGAGGGCTGGAGCCACCTGCCCCCAAGAAGCCTTCATTCACCTTCAGTGCTGCTGTTGCAACTAGGCTGTCCTGGGCGGGACTCCTGCTTGGGTGGGGAAGAGAACGGAGGATGCTGATTACCTTCCCTTCTCAGCCAGCCTGACCTTTTAACACCCTTTGTAAAAAGCATGTATGTATTTATAGTGTTTTAGACTTTTCTAACTTTTGTATCTTAAGAGCTGAGCACCTGTTTAAGCATTTACCCCTGTTGTTAAATGTGTCCTCTCTCCTCTCTTCCTCCTGTAAGTGCCCTTCTAATAAAACTTCATTGAAAAGC EMBV3_41441 GGATGTCATCTCCACCAAACACCAGGAGGGCCTCTTCAACAGCATCTGTCTAGGCATCCT Gene GeneID:100335299|LOC100335299:XM_002694154:557_cdna Constitutive 0 NULL GeneID:100335299 16 GENE LOC100335299 NULL hypothetical protein LOC100335299 EMBV3_29016 GCTTCCCGTGTGGACATCCTTTTTTGGCTGCCTGAGGAACATTCAAGTCAACCACATTCC Gene GeneID:100336873|LOC100336873:XR_084059:53_cdna Constitutive 0 NULL GeneID:100336873 24 PSEUDO LOC100336873 NULL laminin alpha 3 subunit-like EMBV3_13510 CTCCTAGATGTAGAGCTGAAGGGGTGGTGGCAAAGGCTGCAGTTAAAGTGGGAAAGGTCT Gene BVV0102_028346 + 0 NULL GK000019.2:40913527-40924379 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17805 CAGTCCGATGGCTTGGACAGTCAGAAGATACGAAAGCCCACGAGGAAGGTAAAATCAACC Gene GeneID:783362|LOC783362:XM_002699566:75_cdna Constitutive 0 NULL GeneID:783362 X GENE LOC783362 NULL similar to rCG61730 EMBV3_17008 AGTGTGTGCTGAGGACTTGTGGGAGTAATAGAAACACTTTCAGGAGGTTCACGAAGTTCC Gene GeneID:518880|RBX1:NM_001046241:174_cdna UTR3_Alt 2 NULL GeneID:518880 5 GENE RBX1 MGC127542 ring-box 1 EMBV3_23585 TCCTTATCACTCTTCTTTCTCCACCCACTCGGTTATCTAGAAGAAATAACACTGTAAGGG Gene GeneID:613717|KCTD9:NM_001102269:10_cdna Constitutive 4 NULL GeneID:613717 8 GENE KCTD9 MGC159927 potassium channel tetramerisation domain containing 9 EMBV3_32671 AAAATGGTGCAATAATTAAGCGTCGTCTTCCCCCGGCCCCACCGGGTCTACACTAGAGGA Gene GeneID:520939|LOC520939:XM_002688582:293_cdna Constitutive 0 NULL GeneID:520939 7 GENE LOC520939 NULL similar to Krueppel-like factor 2 (Lung krueppel-like factor) EMBV3_27575 GGACTTGTGTATATACACATGCACAATAACCCCACCAGCATCTTTATTGTCAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_30833 TGACTGTGCTTTAGTACGGCTCATTATGATTGTGATCGGTTAAGACCTTGTGCTTGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24890 CAGGGCAGGACTCTGTCTGGTACTTTCCAGCTTTCTTCTACCAAGGATTCACCACAGCCT Variant GeneID:618503|C20orf44:NM_001076508:1348_cdna 353^439 1 EMBV3_30606 GeneID:618503 13 GENE C20orf44 NULL basic FGF-repressed Zic binding protein EMBV3_02712 GGCCTTATCCAGGGAGGGGTTCATCCTGTTCTTCTTTGTTATGACATGGTTCAAGGTTAC Gene GeneID:510138|ALG6:NM_001075432:54_cdna UTR3_Alt 2 NULL GeneID:510138 3 GENE ALG6 NULL asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) EMBV3_20221 CCACCAGCCTGGAGCACCGAGTTTTCCTCAAGTACAATATCTTTTCAGATAGTTGGGAAG Gene GeneID:781458|KLHDC5:XM_002687723:25_cdna Constitutive 0 NULL GeneID:781458 5 GENE KLHDC5 NULL kelch domain containing 5 EMBV3_21050 GCAACTGGCCGTGAGAAATGATGAAGAGCTCAACAAGTTACTCGGGGGTGTCACTATTGC Gene GeneID:614974|HIST2H2AB:XM_002686052:271_cdna Constitutive 0 NULL GeneID:614974 3 GENE HIST2H2AB NULL histone cluster 2, H2ab EMBV3_11743 GAGTTCAAGGAGGTGCTGAAGAGCGAGGAGGTCCGGTTTATCACTAAAATATGGCATCCT Variant GeneID:281225|UBE2K:NM_174080:2_cdna 90^242 2 EMBV3_11158 GeneID:281225 6 GENE UBE2K E2-25K HIP2 HYPG LIG ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) EMBV3_30560 GCCCCAAGAACCAAAAAGAAGGAACAACGGACTTCTCGTCAATCAAAGACCAAGGCGCAG Gene GeneID:781911|LOC781911:XM_002699581:61_cdna Constitutive 0 NULL GeneID:781911 X GENE LOC781911 NULL similar to rCG35727 EMBV3_36735 GCTATCCGGGTGCTAGCTGACCAGAATGTCATCCCTAACGTGGCCAATGTCACTTGCTAT Gene GeneID:540234|LOC540234:XM_002690045:4_cdna Constitutive 0 NULL GeneID:540234 9 GENE LOC540234 NULL similar to mCG11933 EMBV3_22163 ACCATTACTATTATGATCTTATCACAGGAGGCAACAGGGAAGACTGTGTGGATAGAAGGG Variant GeneID:506275|WBP4:NM_001075251:44_cdna 579^625 1 EMBV3_07010 GeneID:506275 12 GENE WBP4 MGC139635 WW domain binding protein 4 (formin binding protein 21) EMBV3_20454 GGTAAACTGTCCTATCCCCACCACGTGCTCACTCAGTCAAGGAGGATCCCAGGACCCAGA Gene GeneID:515401|LIMS2:NM_001130751:24_cdna Constitutive 0 NULL GeneID:515401 2 GENE LIMS2 LIMS1 LIM and senescent cell antigen-like domains 2 EMBV3_37617 TCGACTGAGTGGCGGCAGCCATTACAACAGCTTTTCCCCAGATCTGGCTCTGGACTCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03862 ACCGGGCCTGATCCCGATGGGCTGGACGAGAACGCGAAGCTCACGGACACCTACTGTGCT Gene GeneID:615980|FGFBP3:XM_002698374:45_cdna Constitutive 0 NULL GeneID:615980 26 GENE FGFBP3 NULL fibroblast growth factor binding protein 3 EMBV3_31278 AAATCTCTTCTGATGAATGCTGGTCACCACCTCCACCCTGGGACTCTACCTCAAGGACAT Gene GeneID:535353|LOC535353:XR_083689:63_cdna Constitutive 0 NULL GeneID:535353 5 PSEUDO LOC535353 NULL similar to Pleckstrin homology domain-containing family G member 6 EMBV3_19732 TGGTCCTGCGCACCTTTATCCGCAAGCCCAAGAAGCCCAACTCAGCCAACCGCAAGTGTT Gene GeneID:768042|MRPS12:NM_001077101:790_cdna Constitutive 0 NULL GeneID:768042 18 GENE MRPS12 MGC137645 mitochondrial ribosomal protein S12 EMBV3_23801 CTGCGTTCCGTGCGCTGCGCCCGCGGCAAGATATTCTCCCAGGAGTACATCAACCTCTTG Variant GeneID:512534|HM13:NM_001046124:1009_cdna 300^398 1 EMBV3_19164 GeneID:512534 13 GENE HM13 MGC134054 histocompatibility (minor) 13 EMBV3_43208 CCACATTTCCCACATTGACCGAGTCTACACCCTCCGAGCAGAGAGCATAAATGAAAGGAC Gene GeneID:510879|ITSN1:XM_002707685:73_cdna Constitutive 0 NULL GeneID:510879 1 GENE ITSN1 NULL intersectin 1 (SH3 domain protein) EMBV3_37658 GAAGGTCTTCCTTGAAACAGGGATAATATTCAGGTTATTATAAGTATTTAGGCTTGAAGC Gene GeneID:541058|RFX7:XM_002690886:13_cdna Constitutive 2 NULL GeneID:541058 10 GENE RFX7 RFXDC2 regulatory factor X, 7 EMBV3_30975 TGTCAGTGCTGCCAGGGACCTTATAGTCCAACAAGATCTGTATGTGGTGTGTATGTATAC Gene BVV0102_022598 + 0 NULL GK000019.2:28511706-28519718 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093143 TCONS_00093144 TCONS_00093146 1 XLOC_057093 Coding TCONS_00093143 XLOC_057093 Coding Coding PFAS 19:28495815-28514975 j TSS69957 7345 1 TCONS_00093143_6 1338 0.293533015656909 28 0.618090714546688 2.48972713338011e-07 0 1.49525161418221e-07 0 0 0 0 6.85733350595781e-12 4.6501782726445e-09 6.83125016472699e-05 3.57470283361168e-08 5.60805520297915e-08 4.50780617254533e-08 7.40365221760573e-08 7.49354109362923e-08 0.00382254710564816 0.001217481704862 0.0021801193880415 5.22324940652248e-05 1.14831285463408e-07 4.76917795094193e-08 0.00108545047849009 1.41589862512346e-07 0.000874905244981153 1.09138966031712e-07 0 3.9980594180977e-05 9.13169018915286e-09 0.000177778918533876 0.000337012557508769 XM_005220359.1 PFAS PREDICTED: Bos taurus phosphoribosylformylglycinamidine synthase (PFAS), transcript variant X1, mRNA. 0.0 7559 100.00 0.570456092579986 NM_012393.2 PFAS Homo sapiens phosphoribosylformylglycinamidine synthase (PFAS), 0.0 5066 87.66 0.55357385976855 TCONS_00093143_6 sp|O15067|PUR4_HUMAN PUR4_HUMAN Phosphoribosylformylglycinamidine synthase; 0.0 2423 89.01 0.999252615844544 3 coding 0 0 0 0 0.0107807074869253 0.932085256675534 0.00587317360364731 0.906073723886368 ATTCGAGGAGCTGACGGACTGGGAGAAGTGCTACCACGCGCAACGGACACCTGCAGAGATGTCCTCCGTCCTTCACTTCTATGTCCGCCCCTCTGGCCACGAGAGGGCAGCCTCTGAATACATTCAAAGGAAGCTGCAAAGGGAACTGCCAGAGCTGCAGGGTGTCAAGACCGAGCAGTGCTACAATGTGAACTGGGCAGCGGAGTCCTTCCCGAGCAACAAGGAGATGAAGAAGCTGACATGGCTATTTGGCTGCCCCTTGTTACTGGACGATGTTGCTCAGGAATCCTGGCTTCGTCCTGGCCCCACAGACCTGCTGCTGGAGGTCGGACCCAGGCTGAACTTTTCCACCCCGACATCCAGCAACATTGTGTCAGTGTGCCAGGCTGCAGGGCTGGGGGCTGTGGACCGCGTGGAGCCAACCCGGCGCTACCTGCTCTCGTTTGCCCACCCACCTTCAGCTGACCTGGAGGCCATTGCCCTGGCTACCCTGCATGACCGGATGACAGAGCAGCACTTCCCCCAGCCCATCCAGAGCTTCTCTTCAGGGTGCATCCCAGCACCCCTGAGCGGCCCAATTGACGTGCTGGCTGAGGGCCGGTCTGCCCTGGAGAAAGCCAACCAGGAGCTAGGTCTGGCCCTAGACTCCTGGGACCTGGATTTCTACACCAAGCGCTTCCAGGAGCTGCAGCGCAACCCCAGCACTGTGGAAGTCTTCGACTTGGCTCAGTCCAATAGCGAACACAGCCGACACTGGTTCTTCAAGGGTCGACTCCATGTGGATGGACAGGAGCTGCCACACTCGCTGTTTGAGTCCATCATGAGCACCCAGGCGTCCTCCAACCCTAACAACGTCCTCAAGTTCTGTGACAACAGCAGTGCCATCCAGGGGAAAGAAGTCCGATTCTTGCGGCCTAAGGACCCCACACGGCCAAGCTCCTTCCAGCAATGTCAGGGGCTGAGACATGTTGTCTTCACAGCAGAGACACACAACTTCCCTACAGGAGTAGCCCCCTTCAGTGGTGCAGCCACTGGCACAGGGGGCCGGATCCGAGATGTCCAGTGCACAGGCCGAGGGGCCCACGTGGTGGCTGGCACTGCTGGCTATTGCTTTGGAAACCTGCACATCCCAGGTTACAGTATGCCCTGGGAGGATCCAAGCTTCCAGTATCCAGGAAACTTTGCCCGACCCCTGGAGATTGCCATTGAGGCCAGTAATGGGGCTTCTGACTACGGCAACAAGTTTGGGGAACCAGTGCTTGCTGGCTTTGCCCGCTCCTTGGGCCTTCAGCTTCCGGACGGCCAGCGGCGTGAGTGGATCAAGCCCATAATGTTTAGTGGAGGCATTGGGTCCATGGAAGCTGAGCATGTGAGCAAGGAGCCCCCAGAGACAGGCATGGATGTCGTGAAGATTGGCGGTCCTGTCTACAGGATTGGAGTTGGGGGCGGAGCTGCTTCGTCTGTGCAGGTGCAAGGAGACAACGCCAGTGACCTGGATTTTGGGGCTGTGCAGCGGGGAGACCCAGAGATGGAGCAGAAGATGAACCGTGTGATCCGGGCTTGTGTGGAGGCCCCTGGGGGAAACCCCATCTGCAGCCTCCATGACCAGGGTGCTGGTGGCAATGGCAATGTCCTGAAGGAGCTGAGTGACCCGGCTGGAGCCGTCATTCACACCAGCTGCTTCCAGCTGGGGGACCCAACCCTGAATGCCCTGGAAATCTGGGGGGCCGAGTACCAGGAGTCGAACGCACTTCTGCTGAGGCCCTCTGACCGGGACTTCCTGAGTTGTGTCAGCGCCCGGGAACGCTGCCCAGTCTGCTTTGTGGGCACCATCACTGGAGACAGGAGAATAGTGCTGGTGGATGATCGGGAGTGGCCTATGGGCACAGGTGGCCAGGTGGATGCGCCCCCCACTCCTCCCCCAACCCCTGTGGACCTGGACCTGGACTGGGTGCTGGGCAAGATGCCCCAGAAGGAGTTCTTCCTCCAGAGGAGTCTCCCCTTGCTGCAGCCTCTGACTCTGCCCCCAGGGCTGAGCGTGCGCCAGGCTCTGGCGCGGGTCCTCAGGCTGCCTGCCGTGGCCAGCAAGCGCTACCTCACCAACAAGGTGGACCGTTCTGTGGGCGGCCTGGTGGCCCAGCAGCAGTGTGTGGGACCCCTGCAGACCCCTCTGGCAGATGTGGCGGTTGTGGCACTGAGTCACCAGGAGCTTGTAGGGGCCGCCACAGCCCTGGGAGAGCAGCCAGTCAAGAGCCTGCTGGACCCGAAGGTTGCCGCCCGGCTGGCTGTGGCCGAAGCCCTCACCAACCTGGTATTTGCTCTGGTCACCGACCTCCAGGATGTGAAATGCAGCGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGGGAGGGTGCAGCTCTGGCTGACGCCTGTGAGGCTATGGTGGCAGTGATGGCGGCCCTGGGTGTAGCGGTAGACGGTGGCAAGGACTCCCTCAGCATGGCTGCCCGGGTTGGCTCTGAAACCGTGCGGGCTCCTGGGTCACTGGTCATCTCAGCCTATGCTGTCTGTTCAGACATTACAGCCACTGTGACCCCAGACCTCAAGCGTCCTGGGGGGAGAGGCCACCTGCTCTACGTGCCTCTGAGTCCTGGGCAGCACCGGCTGGGGGGCACAGCTCTGGCTCAGTGCTTCTCCCAGCTTGGCGAGCAGCCTCCCGACCTGGATGTTCCTGAGAACTTGGTGCGAGCCTTCAGCATCACCCAGGGGCTGCTGAAAGACCGCCTCCTCTGCTCAGGCCATGATGTCAGTGATGGAGGTCTCATCACTTGCCTGCTAGAGATGGCCTTTGCTGGGAATTGTGGGATAGAGGTGGACATCCCCGCACCTGGGGTCGATGCCCTGCCTGTGCTGTTCGCCGAGGAGCCAGGCCTGGTGCTGGAGGTGCAGGAGCCGGACCTCGCCCAAGTGCTGATGCGTTACCGGAATGCTGGCCTCCACTGCCTAGAGCTGGGTCTCACAGGCGACACGGGGCCCCACGCCATGGTCCGCGTGTCGGTGAACAGGACGGTGGTTCTGGAGGAACCTGTTGGGCAGCTACGAGCCCTCTGGGAGGAAACCAGTTTCCAGTTGGACCGGCTACAGGCAAAACCACACTGTGTGGCCCAGGAAGAGCAAGGGCTGAGGGAGCGGGCAGGGCCCACCTTCTGCCTGCCGCCTACCTTCCCCAGAGCTTCCGTGCCTTGTGAGCCTGGTGGTCCTGCCCCCCGAGTCGCCATCATTCGGGAAGAGGGCAGTAATGGAGACCGGGAGATGGCAGATGCCTTCCACTTGGCTGGATTTGAGGTGTGGGATGTAACCATGCAGGACCTGTGCTCTGGAGCCATCGGGCTGGACACATTCCGCGGTGTGGCCTTCGTAGGCGGCTTCAGCTACGCGGACGTCCTGGGCTCTGCCAAAGGCTGGGCAGCTGCTGTGACCTTTAACCCGCAGGCCGGGGCTGAGATGAAGCGCTTCCGCCAGCGGCCAGACACCTTCAGCCTGGGCGTGTGTAACGGCTGTCAGCTGCTGGCCCTGCTGGGCTGGGTGGGAGGCAGTTCTAGTGAGGAGGTGGTGGAGATGTGCCAGGAGTCCTGGCCGGCCCGGCCCGGTCTCCTGCTACGCCACAACCTGTCTGGGCGCTTTGAGTCGCGCTGGGCTAGTGTGCGCGTGGGGCCCGGGCCAGCCCTGATGCTGCGAGGGATGGAAGGCGCGGTGCTGCCCGTGTGGAGCGCTCACGGGGAAGGTTACATGGCATTTTCTTCTCCGGAACTCCAAGCCCAGATGGAGGCCAGGGGCTTAGCTCCACTGCACTGGGCAGATGATGATGGGAACCCCACGGAACAGTACCCCCTGAATCCCAACGGCTCCCCAGGGGGTGTCGCTGGCATCTGCTCCCCCGATGGCCGCCACTTGGCCCTCATGCCTCACCCGGAGCGGTCTGTGAGGCCTTGGCAGTGGGCCTGGCGACCTCCTCCATTTGACACTCTAACCACCTCCCCCTGGCTCCAGCTCTTCATCAATGCCCGGAATTGGACCCAGGAATGCAGCTGCTAAACAGGCCGGAAGGCTACCCTGGGCCCCGTGGTTCGTACCCAGGGTATCTTTAGAAGTACGTCATCAGTTCAGTTAAGTTCAGTCGCTCAGTCGTGTCTGACTCTTTGCAACCCCATGAACCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCTAGAGTTTACCCAAACTCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTCTCGTCCCCTTCTCCTCCTGCCTTCAGTCTTTCCCAACATCAGGGTCTTTTCAAATCAGTCAGCTCTTCGCATCAGGTAGCCAAACTATTGCAGTTTCAGCTTCAACATCAGTCCTTCCAATGAAGCCCAGGACTGATTTCCTTTAGGATGGACTGATTGGATCTCCTTGCAGTCCAAGAGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAGAGCATCAATTCTTCGGTGCTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATACCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGTTTTTTAATATGCTGTCTAGTTTGGTCATAACTTTCCTTCCAAGGAGTAAGCATCTTTTAATTTCATGGCTGCAGTCACCACCTGCAGTGATTTTGGAGCCCCCAAAAATAAAGTCTGACACTGTTTCCCCATCTATTTCCCATGAAGTGATGGGACTGGATGGCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCATTCTCTTTCACTTTCATCAAGAGGCCCTTTAGTTCTTCACTTTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTTCCAGCAATCTTGATTCCAGCTTGTGCTTCTTCCAGCCCAGCGTTTCTCATGATGTACTCTGCATATTAGTTAAATAAGCAGGGTGACAATATACAACCTTGATGTACTCCTTTTCCTATTTGGAACCAGTCTGTTCCATGTCCAGTTCTACTTGTTGCTTCCTGACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGGTATTCCCATCTCTTTCAGAATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCAGAAATAGATGTTTTTCTGGAACTCTCTTGCTTTTTCCATGATCCAGCGGATGTTGGCAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAAACCACCTTGAACATCTGGAAGTTCACAGTTCAGTATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTGACTAGCGTGTGAGATGAGTGCAATTGTGTGGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTAGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCAAGTACCTCTTATTATTCCCAAATGTGTCTTGAACAGACAAGGACCAAAATGCCAAAAAAAGACCTCAGCTAATTTTATTAATCTGCCTCCCTTTGTCTTAGGATGTTGGATCTGTTTTCAGTCCTGTTTTTGATGGGCCCAGGAAGCAGCATGGGCTTCAGAGAAAGAGCCTGCCTGGGAAGTTAGGATGCATGCAGGCTGGGGGTTTCCCTTGCCCCACTTCCCTGCACCACGTCACTCGTGTCACTTATCTGGGTTTGGAGGGTAAATCCTGTGTCCCATCCCCCTATCATCAGGGTTTAAGGGGATGGGGGTGGACAAAAGCATACAAGTCAGGGCCTGGGCGTTCTCATCTGAAAGACAGCTGAAGCTTTCTTTTTAAATGGATTCTTTTTAAATGCAGCACTGTGCTAAGTGGTAACAGACTTTGGCAGCCTCTCTGATAGTGTTTCCAGCTGTGTCATAGGGGTTGCCCTGGTGCTGGCCTCTGAATTCAGTACCCCTGATTCTTGCTTCTCCTAATTTAGCAGCTCCCTTCCTGACAGAAGTGGTCAGCACTCTTATCCCCAGCACTGAGCCTTTAATATTCATTCCTTCATTCATTCCATTCATGTTCGATGATTTGCAACAGTGCCAAACACTGTCAGTGCTGCCAGGGACCTTATAGTCCAACAAGATCTGTATGTGGTGTGTATGTATACACACCAGACTATTAGAGCTGCAAGAAAGAAGGAAATCCTGCCATTTGCAACAACATGGATGGACCTCAACAGCATGAAGCTAAGTGAATAAGAGAAACAAGTCCTGTATGATCTCACATGTAGAATCTAAAAGAAGCTGAACTCATGGAAACAGGCTAGAATGGTGGGTGGGGGGAAAGGGAATGTTGGTCAAAGGGTACAAACTTCTAGATTACTTGATGAATAACCTCTGGGGGTCTAATGTACAGCATGTTGATTGCAGTTAATAACTGTTGTGTACCTGAAAGTTGCTGCAAGAGTAAATCTTAAAGATAGTGATGTAGATATGCGTGTGCATGCTAAGTCACTTCAGTCATTTCTGACTCTCTGACCCTGTGGACTAACCCACCAGGCTCCTCTGTCCATGGGATCCACCAGCAAGAATACTGGAGTGGGTTGCCATGCCATCCTCCAGGGGATCTTCTCGACCCAGGGATTGAACTTTCATCTCTTGTCTCCAGCATTGGCAGGCGAGTTCTTTATCATTATTGCCACCTGGGGAGTCCAGTGTGAGGTGTGGTGGTAATCATTTGCTAGTGTGTCAAGTCAATACATTGTACACCTTAAACTCACATAATGTGATGTCAATCATATCTCAATAAAACAAAAAAATACCAGTATATGGCACCTACCATGAACCAAGCATATGCTAGGCATTTATATGTATCTAAATTATTTTTCATAAGAGTTCAGCAAGGTACTTGATAGCCCCCTCCCCACTTTTTAAAACAAAGGAAGAATTAAGGTTAAATAAATTGCAACATCTACTTCCTACTGTCCTAAAGTCACATTTCCGGGAGGCAGCATTGTCAGGACTTCTTGCTGACAACCATCCTTGCTTCCTTTGTCCAGAGAAGTGTATGTGGAAGTTTCTCATGACTGCTGTGACTGTCCTGTTATACAGCTCCCTAAGTAGCTCACCATCTTAGAAATTTCTCTGAGGGAATTCTTTGGTGGTCCATGAGAGCAGGAACTCCCTTTCTGCCCTCCACTGTATCCAACACCTAGCACAAGGCCTGTCACCTACATGGTGCTCAATAAATATATATTGAACAAATGAATAAATAATG EMBV3_22841 TATCATCTCTGTGAAGGGGATCAAGGGACGATTGAATAGACTTCCTGCTGCTGGTGTGGG Gene GeneID:504876|RPL23:NM_001035014:53_cdna Constitutive 0 NULL GeneID:504876 19 GENE RPL23 MGC127875 ribosomal protein L23 EMBV3_37009 GACCCTGTGGAGCGGCCTCCCAGCCACCCTTGGGCACCGTGACTGTGATCAGCCCCCTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32210 ATGGACATCTCTGATGTTGGGGACATCCAGGCCCCATGCGGAACCACTTCTGGAGCTGGG Gene GeneID:504535|CHAF1A:NM_001101842:176_cdna Constitutive 0 NULL GeneID:504535 7 GENE CHAF1A MGC152577 chromatin assembly factor 1, subunit A (p150) EMBV3_28031 TTCAGGGATATAACCGACTGACCTGGATAGTTGTTGTTCTTCAGGCACTGGGAGGCCTTG Gene GeneID:520918|SLC35A3:NM_001105386:119_cdna Constitutive 0 NULL GeneID:520918 3 GENE SLC35A3 NULL solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 EMBV3_42179 CTGATTGAGGACTGCCAACTGGCACTGCAGGTGGAATTCCCAGAGGCCCGGATCTTTGAG Variant GeneID:507911|KCTD13:NM_001038057:269_cdna 577^915 1 EMBV3_15089 GeneID:507911 25 GENE KCTD13 MGC134443 potassium channel tetramerisation domain containing 13 EMBV3_39487 ACTAGAAACTCGGTTCCTTGAGAGAGAAGTGTCAAAAGTTATGTGCATGATCTCCACAAG Variant GeneID:617536|TMCO5A:NM_001076467:106_cdna 717^860 1 EMBV3_28634 GeneID:617536 10 GENE TMCO5A MGC127882 TMCO5 transmembrane and coiled-coil domains 5A EMBV3_23119 TTGTGATGTCACAGCCTTTTGACTTTGAGGACCTCTGCGATGGTCTAGAGAGTTTCTCTC Gene GeneID:100337382|LOC100337382:XM_002684008:2_cdna Constitutive 0 NULL GeneID:100337382 Un GENE LOC100337382 NULL heat shock transcription factor, Y linked 2-like EMBV3_03206 CTTCTACATTCTGGATGAACCCACAAACCACCTGGATATGGAGACCATTGAGGCTCTGGG Gene GeneID:530975|ABCF3:NM_001083457:37_cdna Constitutive 0 NULL GeneID:530975 1 GENE ABCF3 MGC137960 ATP-binding cassette, sub-family F (GCN20), member 3 EMBV3_40319 GGTGCACTGCCTTTTGCTGAGAGTTGTCTTAAGCTATGGGATAGGAGCAGAGGGACCACT Gene GeneID:507880|SEC31B:XM_002698431:401_cdna Constitutive 0 NULL GeneID:507880 26 GENE SEC31B NULL SEC31 homolog B (S. cerevisiae) EMBV3_28619 GAAAGGAGGGTGGGATGGTGTGCCTTCCTGGGAATTAACCTGCTCCTGCTTTACTGCTAA Gene GeneID:507590|DBNDD2:NM_001130748:925_cdna Constitutive 0 NULL GeneID:507590 13 GENE DBNDD2 NULL dysbindin (dystrobrevin binding protein 1) domain containing 2 EMBV3_00309 GAACTGTGGATGGAGCTTCATGACATTGTACAGGAGACAGGGATCAAGACCATCTCCAAG Gene BVV0102_459642 - 1 EMBV3_23786 GK000002.2:5044967-5131710 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170957 TCONS_00040522 TCONS_00060488 TCONS_00060490 TCONS_00060495 TCONS_00200492 TCONS_00238990 TCONS_00240765 TCONS_00253925 TCONS_00107634 TCONS_00078868 TCONS_00170954 TCONS_00012522 TCONS_00060491 TCONS_00233568 TCONS_00030341 TCONS_00060497 TCONS_00029932 TCONS_00012520 TCONS_00250647 TCONS_00170956 TCONS_00231011 TCONS_00012521 TCONS_00217917 TCONS_00060493 TCONS_00022660 TCONS_00060496 TCONS_00102592 TCONS_00180525 TCONS_00031458 TCONS_00060489 TCONS_00006998 TCONS_00060492 TCONS_00170958 TCONS_00116551 22 XLOC_103690 XLOC_024338 XLOC_036754 XLOC_122144 XLOC_145656 XLOC_147429 XLOC_156863 XLOC_063544 XLOC_047753 XLOC_007883 XLOC_143050 XLOC_016594 XLOC_016187 XLOC_153590 XLOC_140500 XLOC_131606 XLOC_013330 XLOC_061901 XLOC_110292 XLOC_017706 XLOC_002560 XLOC_070718 Coding TCONS_00012520 XLOC_007883 Coding Coding BHMT 10:10147187-10152189 j TSS9496 1995 2 TCONS_00012520_2 71 0.268170426065163 3 0.601679664067187 0.000440507513705249 0.000478748756548862 0.000955989849994326 0.000134319211728988 0.000249514424041447 6.98649914970913e-05 0.000607143813396815 0.000242775568216186 0.000221983483364499 8.35734351391253e-05 3.23804281680842e-12 9.19169689390470e-11 7.32443905954223e-11 7.25113699697235e-11 2.99676249696141e-08 7.92574310505845e-10 1.0010259339924e-07 1.47764331212076e-09 0.000206849547087553 0.00122983362020152 3.45796518228587e-11 0 4.54358312811123e-08 1.21335680864168e-09 0.000408791628797465 5.09339015806635e-08 0.000218095289553691 0 3.26202979621714e-08 2.89092192912355e-08 XM_005211265.1 BHMT PREDICTED: Bos taurus betaine--homocysteine S-methyltransferase (BHMT), transcript variant X1, mRNA. 0.0 1772 100.00 0.491729323308271 NM_001713.2 BHMT Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), 0.0 917 76.68 0.644110275689223 TCONS_00012520_2 sp|Q5I597|BHMT1_BOVIN BHMT1_BOVIN Betaine--homocysteine S-methyltransferase 1; 1e-44 150 100.00 0.985915492957746 0 coding 0 0 0 0 -0.14077896576153 0.397300454388436 -0.0817267875438511 0.167600609519459 AGTGAAGACTCTGCTTCTGGTTCTAGCTCTGTTGCTTAGTGGCAGAACCTTAGCAAAGGTCCGTAGTTCACCCAGATCTGGATTTTCTCATCAGATAAATAAGGACTGGAACCCAGAGTTGCAACCAGATGGGATATTCAAAAGTATGCCAGAGAGGCCTACAACCTGGGGGTCAGGTACATAGGTGGGTGCTGTGGATTTGAACCCTACCACATCAGGGCAATTGCAGAGGAGCTGGCTCCGGAGAGGGGATTTTTGCCACTGGCTTCAGAAAAACATGGCAGCTGGGGAAGTGGTTTGGATATGCACACCAAACCCTGGATTAGAGCCAGGGCCAGGAAGGAATACTGGGAGAATCTTCAGATCGCCTCGGGCAGGCCGTACAACCCTTCCATGTCAAAGCCGGACGCCTGGGGAGTGACCAAAGGAACAGCCGAGCTTATGCAGCAGAAGGAAGCCACAACGGAGCAGCAGCTGAGAGAGCTCTTCGAAAAACAGAAGTTCAAGTCTGCACAGTAGCCTCGATAGAAACCATTTTTAGTGACTTCCTCCAGGCTTGGGCCACAGTTCCAAAACTAAGGAAAAGATAGTTAAAAGGCAATGCTTATACAAATGCCAGCTTACGCGTCAAGATTGACAGGAACTGAACAAAACAATTATAAATAACACTTGACCATTTTTTAAAAGTATGTATTTAGAACTTGGAAGCAAAATGAATAACAAGTAAATCTTAAACTGGCTTACTAAGTAAACCAGGTACACGGTATTAAGGAAATCACTGTGGCCAAGAAAAAATAATTTGGACAATAGTCCTACTTTAAAAATTTCACAGGCTGGTAAGAAGGATGAGATGTGAGCTGTCATAAATGGTGTAGCAACCAGACAAGTGCAAAGTGCTATAGGAAAGTGACTTTCAAGCTTTTTGGAAATGGCCCTTAATGAGAAACACAATTTATATAATGACCTGGTAAGGCACATGTACAACCATTGAAATAAAATGTGATCCATTCTGATATTTTTAAATTCCATTCCTTTCTGTCCTATTTCATTAATAAAATATGCTGGTTAAGGCCTTTTAAATTGATTTTATGACCATTAATTGAAAACCACACATTGAAAAAACACTGCTAAGGGACATTTCAGCTATAGGGACTTGGCTATTCCTTTACATTTCTCCTTAGAAAATCAGTCCTATGGGACCAGATTAGTAAACATTCAAAGCTTAGAGTCCTGCTGTCTAGAGTTCCAGAGTTGTTCCCTCTTTTCTGACCCATTTCCACCACTAAGAAGCATTCAGACCAATGGGGAGGCCAAGAAGGGATTGGTACCAGGCTCTCTCCATTCTGCCTTAGGCTGGATCCACCTAAATGCCTCCAGTCAGTAAGGCTAGTGAGAAATGGTCTTGAAATGGCCACCCACTCCAGTATTCTTGCCTTGAAAATCTCATGGACAGAGGAGCCTGGGGGGCTACAGTTCATGGGGTCACAAAGAGTAGAACATGAGTAAGCGACTAAACACAAAAAGGTCTAATAAAAAGAGATTTTCCAAACTCTGTTAGGGTTTCCTAGATTGAGAACTATATTTTCTCCTGGTAATACCTACTCTGAAAACTCAAGCCTGAAGATGTAAGATCACTGGAATAAATGACTACTCATTGTATTAGAAAAGAGTTCATGCTTCTTTCTCAACATTCTTGGATTGGTGTGGCTGCTTTGAAACTCTTAATTTCTTCAGCTATTAAAAAAACCAATAAGACTACCTTGGATGTATTTGATTCTGTTCCATAATTTGCTATATACAGTGGAAGTGACAAATAGATTTAAGGGACTAGATCTGGTAGACAGACTGCCTGATAACTATGGATGGAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATGCAAAAAAGCAAAATGGCTGTCTGGGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGCGAAAAGCAAAG EMBV3_03930 CTTGTGGGCTGAATAATTGGCACAACTCTATCTAAGGTGTTTACTAGTTTCTGGAGTGTG Gene GeneID:540464|NEUROD6:NM_001076221:25_cdna Constitutive 1 NULL GeneID:540464 4 GENE NEUROD6 MGC142747 neurogenic differentiation 6 EMBV3_03529 GAGGACAGCTGAGGACACCACATAGAAAACATTCTGTCCAGTTTGGGGGTGAGGAGTGGT Gene GeneID:525795|AGRN:XM_002694193:687_cdna Constitutive 0 NULL GeneID:525795 16 GENE AGRN NULL agrin EMBV3_14308 GAAATAATGCAAAATTTAAGTAGTATACAGTGACTAAGGTAATAAAGCAAAAACTATTTA Variant GeneID:614469|ITGB3BP:NM_001079619:75_cdna 412^505 3 EMBV3_19721 GeneID:614469 3 GENE ITGB3BP NULL integrin beta 3 binding protein (beta3-endonexin) EMBV3_22965 TTGGCTTCCGTGTCCATCACCAACTCCAGGGGCTTGCTCAAACTCATGTCCATCGAATCA Gene BVT0102_079199 + 0 NULL GK000019.2:39913249-39938324 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232083 TCONS_00030692 2 XLOC_141569 XLOC_016945 NonCoding TCONS_00030692 XLOC_016945 NonCoding NonCoding - 11:27307073-27307552 - TSS21691 479 1 TCONS_00030692_1 34 0.369519832985386 1 0 5.5868060809516e-05 0.000130688257443542 1.01817252235027e-05 2.3705861395476e-05 7.5277733570961e-05 0.000146876865797368 1.38719991548288e-05 2.30344432974922e-05 4.41495801372459e-05 3.55964851158234e-05 1.05858365363841e-05 1.58767605117036e-05 1.72731652930942e-05 0.00026714101399094 8.70215884316647e-05 0.00206968677146272 0.00207289587646481 0.000738456697488396 5.4060643990906e-06 4.16789203195186e-05 3.5116551268594e-05 0.000237802526643714 0.000414230875993087 0.00080530142092549 8.5859455274109e-06 4.60036489898077e-05 5.69759934283475e-05 7.0493354868441e-05 9.80835620885628e-05 7.01801771417703e-05 XM_005194400.1 FAM217B PREDICTED: Bos taurus family with sequence similarity 217, member B (FAM217B), transcript variant X1, mRNA. 2e-57 226 88.33 0.37160751565762 0 noncoding 0 0 0 0 -1.70767795796122 0.0187036130359615 -0.496660969168083 0.000990531285618173 GAAAATATCTGCCTATGAGAGTCTTGATTGAAGGCAGAGGAGAAGGGGACGACAGAGGCTAAGATGGTTGGATGGCATCACTGATTCGATGGACATGAGTTTGAGCAAGCCCCTGGAGTTGGTGATGGACACGGAAGCCCAGCGTCCTGCAGGCCACGGGGTCCCAAAGAGTCAGACACGACTGAGCCACTGAACTGAACTGAACATACAATCGTTTCTCCAGGTGTTTTGGTTACCCGAGGTTCTATCCTGTGCTAAACTAAGCGACGACAGTGTACTGAAGAGCTGGGTCATTTCCAAATAAATTAAAGTTCTGAAACATTCACGCCTTGAAAGGACCTCCCTTTTACACAGAAACAAAAGAGATTTTTGACTATCCAATAAGAGTGTCTGGCACCATCCTGACATGTGAAACGTAAGAAAGCAATTTGTTTTGTTTTGTTTGGTTCTGATCTTGGGTGTGTGTGTGTGTGTGTGTN TCONS_00027373 . 5' 43375 TCONS_00027373 . 5' 43375 EMBV3_28500 CACCGGCTTGAATGCTGGCGGTTCGTTTAATGATCAGTGTGAAGTGTTTTCCTCCCTGAG Gene GeneID:515816|NEK6:NM_001098988:23_cdna Constitutive 2 NULL GeneID:515816 11 GENE NEK6 MGC149008 NIMA (never in mitosis gene a)-related kinase 6 EMBV3_27614 CATGGGTTCTCTTTCCAGAGCAAACCCTTATAAACATTTCACTGATCCTGCTTCCCCATG Gene GeneID:540274|RNF14:NM_001081540:29_cdna UTR3_Alt 3 NULL GeneID:540274 7 GENE RNF14 MGC155209 ring finger protein 14 EMBV3_08096 AGCGAGTACCCCTGTTGAGTAGTTTTCTTTGGCCTAGAGGAATGGCCTGGGAAACACATC Gene GeneID:515330|MYO9A:XM_002690529:559_cdna UTR3_Alt 2 NULL GeneID:515330 10 GENE MYO9A NULL myosin IXA EMBV3_35772 AGGAACCCTCCAGTGAGGATATTGTGGAGTCTTCATCACCCAGGAAGAGAGAGAAGAACG Gene GeneID:510175|PROCA1:NM_001166568:85_cdna Constitutive 0 NULL GeneID:510175 19 GENE PROCA1 NULL protein interacting with cyclin A1 EMBV3_29820 TGATGAGAATTTTGGGGGCCAGCCTCTAAGGTCCAATGATATGACTTGCAGCAGTGACCT Gene GeneID:782682|LOC782682:XM_002696549:15_cdna Constitutive 0 NULL GeneID:782682 21 GENE LOC782682 NULL similar to myeloid-associated differentiation marker EMBV3_26392 CCCACAGCACCCCTCCTTCCCAACAGATGTACAGTGTTCTGTCTCGATGCAAAATCTACA Gene GeneID:616052|C21H14ORF129:NM_001078056:300_cdna UTR3_Alt 1 NULL GeneID:616052 21 GENE C21H14ORF129 NULL chromosome 14 open reading frame 129 ortholog EMBV3_10124 CCAAAGTGGCGTGGCTCCCCGGGCACTAAGGATTCTCAAGAAAGACATGTCTGACAAGAT Variant GeneID:317697|ITPR1:NM_174841:2_cdna 139^214 1 EMBV3_10901 GeneID:317697 22 GENE ITPR1 NULL inositol 1,4,5-triphosphate receptor, type 1 EMBV3_02445 GAGGAAATACTTGGAGAAAGACACCCACAGAACTGTACGCACAAGCAGAAGAGACCTATA Variant GeneID:789903|TTC19:XM_002695862:338_cdna 802^964 2 EMBV3_06869 GeneID:789903 19 GENE TTC19 NULL tetratricopeptide repeat domain 19 EMBV3_04801 AGCTCCACTCTCAGGAGGGCTTTGTGTCTGCCCACAGTTGTCTTCCTTCTGGCCTTCTCT Gene GeneID:615457|TK2:XM_002694895:944_cdna Constitutive 1 NULL GeneID:615457 18 GENE TK2 NULL thymidine kinase 2, mitochondrial EMBV3_35171 TTCCAGACCATCGAGGAGCTCCAGAAGAAGGTACGAGACCGAGGTATCCATGCGGCAGCT Variant GeneID:536311|KRT35:NM_001076073:172_cdna 500^582 1 EMBV3_00551 GeneID:536311 19 GENE KRT35 MGC139866 keratin 35 EMBV3_19376 TGACCCACGATCAGAGTCCAGCCCCACTGTTGGAAAGAATGAGGTGTGGGAACACTTGTT Gene BVV0102_450558 + 0 NULL GK000019.2:38497086-38503101 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31504 AAGGCCCTGTAAACCTGTACCTTCTTAGATAAGCCGCCAGTAACAGATTGTGATAACCTG Gene GeneID:517251|C9H6ORF35:NM_001046228:7_cdna Constitutive 1 NULL GeneID:517251 9 GENE C9H6ORF35 MGC137528 chromosome 6 open reading frame 35 ortholog EMBV3_30355 CACGCTTTCTCTCGTTACAGACACTGTTCCTTTTCTGACACAGTTCGATTGGGGACCACG Gene GeneID:515159|GNA12:XM_002698227:827_cdna Constitutive 0 NULL GeneID:515159 25 GENE GNA12 NULL guanine nucleotide binding protein (G protein) alpha 12 EMBV3_05761 GGCTCAGCTACAAACCAGCATCTTAGTGCCATCATCTTTGTCTCAGTCTCTTGGGGTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38663 GAAAGACTTCTCCAGGCCCGGTCACCATTACTCCCAGCTCCATGCGGAAAATCTGTACAT Gene GeneID:539953|LOC539953:XR_084596:257_cdna Constitutive 0 NULL GeneID:539953 16 PSEUDO LOC539953 NULL similar to Denticleless protein homolog (Lethal(2) denticleless protein homolog) (Ddb1- and Cul4-associated factor 2) (Retinoic acid-regulated nuclear matrix-associated protein) EMBV3_16728 CAGGACTGCCGCTCTGGCCAGTGACCAGCGGGGCTGTGCAGATGCTCTCAACCACGCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39033 AGTGGGTGAACTATGATGAGGACGAGTTGTGCGTGAAGATGCAGCTAGCTGATGGGATCT Gene GeneID:534896|CEP350:XM_002694164:585_cdna Constitutive 0 NULL GeneID:534896 16 GENE CEP350 NULL centrosomal protein 350kDa EMBV3_20850 TGGTCCAGGAATGCACTGACTTTCAGAGGATGTGTATCCAGACTCAGTTGCCTGGTGTGT Gene GeneID:615418|ADAT2:NM_001034780:14_cdna Constitutive 0 NULL GeneID:615418 9 GENE ADAT2 DEADC1 adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) EMBV3_08472 GGGCTCGCAGGGAAACATCGTATTTGTCTGAGGGAGGACATTCCATGAGTGAGTAATAAC Gene BVT0102_301526 + 0 NULL GK000023.2:8688925-8726519 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22343 TGTGGAAGATACGGTGGGTAAAGGAAACTACCTCATTCTTCGAAGGTTTTGTCAAAGCAC Gene BVV0102_020262 + 0 NULL GK000005.2:85597792-85614198 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192765 TCONS_00192760 TCONS_00192763 TCONS_00192761 TCONS_00192764 TCONS_00192766 TCONS_00192762 1 XLOC_117266 Coding TCONS_00192760 XLOC_117266 Coding Coding BCAT1 5:85480246-85604230 = TSS144184 8700 1 TCONS_00192760_2 386 0.143563218390805 11 0.929917811312841 1.16684037890633e-32 7.69218435619463e-26 7.59265686686689e-39 5.32633828370075e-28 3.24684596232048e-26 1.73370589313994e-20 1.24672397467448e-41 1.01841836666176e-76 1.14199401022593e-24 1.50255721542122e-32 6.86073087748263e-33 1.08510442879149e-41 1.79620598037293e-26 2.02320869495415e-63 1.43742905938659e-36 1.71806940827641e-07 0.00590727721912919 0.007845750571668 4.06760443064451e-44 8.60320242003917e-42 3.08278308719061e-180 6.59900924367813e-08 2.2112382165278e-09 0.00177978201867572 1.72962279747214e-49 2.3414110081931e-17 3.34187908962776e-52 7.93781931631797e-05 6.4107502960161e-05 0.000216494113684653 NM_001083644.1 BCAT1 Bos taurus branched chain amino-acid transaminase 1, cytosolic (BCAT1), mRNA. 0.0 4073 99.96 0.259770114942529 NM_005504.6 BCAT1 Homo sapiens branched chain amino-acid transaminase 1, cytosolic (BCAT1), transcript variant 1, mRNA. 0.0 1887 80.39 0.230459770114943 TCONS_00192760_2 sp|P54687|BCAT1_HUMAN BCAT1_HUMAN Branched-chain-amino-acid aminotransferase, cytosolic; 0.0 733 90.41 0.99740932642487 1 coding 0 0 0 0 -1.28950466131584 0.00518618384071807 -0.204777015734603 0.0756568881853598 GGAGCGCTCGGGACGCAGGGCCTCTGCCTCCGCTCGCCTCTAGCTGCTGTGTTCGAGCTCTGGCCCCACGATGAAGGATTGCAATAATGGATGCTCCGCAGAAGGTACCGGAGAAGGCGGATCCAAAGAGACGGTGGAGACTTTCAAGGCTGAAGATCTAATAATCACACGAGCCACCGTTTTAAAGGAAAAACCAGACTCCAGTACTCTGGTTTTTGGAACGGTTTTTACAGATCACATGTTAACAGTGGAGTGGTCCTTGGAGCTTGGATGGGAGAAACCACGCATCAAACCTCTTCAAAACCTCTCACTGCATCCGGGTTCATCGGCTTTCCACTATGCTGTGGAATTATTTGAAGGGTTGAAGGCATTTCGAGGAGTAGATAATAAAATTCGTCTGTTTCGGCCAAACCTCAACATGGATAGGATGTACCGATCTGCTATGAGGGCCACTTTGCCGGCGTTTGACAAGAAAGAGCTTTTAGAGTGTATTCAGCAGCTCGTGAAATTGGATGAGGAATGGGTCCCCTACTCAACATCTGCGAGTCTATATATCCGTCCTACGTTCATTGGAACTGAGCCTTCTCTGGGGGTCAAGAAGCCGACTAAAGCCCTGCTCTTTGTAATCTTGAGCCCAGTGGGACCTTATTTTTCCACTGGAAGCTTTAATCCTGTGTCCCTGTGGGCCAACCCGAAGTATGTAAGAGCCTGGAAAGGTGGGACCGGAGACTGCAAGATGGGAGGGAATTATGGCTCATCTCTTTTTGCCCAATGTGAAGCCGTGGAAAATGCATGTCAGCAGGTTCTGTGGCTCTATGGAGAAGATAATCAAATAACTGAAGTTGGAACTATGAATCTTTTTCTTTATTGGATAAATGAAGATGGAGAAGAAGAACTGGCAACTCCTCCGCTAGATGGCATCATTCTTCCAGGAGTGACGAGGCAGAGCATCCTGGACTTGGCACACAAGTGGGGTGAATTTAAGGTATCAGAGAGATACCTCACCATGGATGACTTGACCACCGCTGTGGAGGAGAACCGGGTGAGGGAGATGTTTGGTTCAGGCACCGCCTGTGTTGTTTGCCCTGTTTCGACTATACTGTACAAGGATGAGACTATACACATTCCAACTATGGAGAATGGTCCTAAGCTTGCAAGCCGCATCTTAGAAAAACTGACTGATATTCAGTACGGAAGAGAAGAGAGCGACTGGACAATCACGGTAGCCTGAATGGACAGGAACGGGACGTGTGCACTTGGGACAGACTGTGCATTTGAATTATGGGAAATGTCTTTGGCTACCTGATTTTAGTTGTGCTGTTGTTCATAATATCTGCGTTACCAGGGCGATTATTTCCTCATGCCAGAGAAGACGAATCGCAATCGTCCAATGATCGTTTCTAAACTTGCTCCTAGAAGTTTTCCTTACCTTCTCTAGAGAGTTGATTATGGAAGCCATAGAATTGTAGAATTTTCCTCCATAATCTTAGTGCCTCCCTTAGGGCTTCACTCAGATTTTTAAAAAAAAAAGTTTATTCTTTAGCATAAGTTATGTTCTGCTTCTCAACCAATGAGTGTCTTTGTGTTTGAAAGCTGATCTGAGTACATTTCATAGGTACCATTTCCCGGGCCACATCTCCATTCTCAGAAAAGTGTGTTGTTGTTGTTGTTTATAAATCAAGACTTAGAGAAACTGGATTTCTTTCCCTTACATTTCTTTCAAGGTCCCCTAAGTCCTCTTAGGGAGAATCTCTCCTCCTTCCTGATATCACAGTTGGCACCAGGCTCCACTGGTACATCAACAAGACCACCCCTGCTGTCTCCAGATTGTGCTGTAATTCGTGGGCAGGCTTCACTACAGGACTGAGGGTCTTGTGCCTTATAGATCTTTGCATCCCCCAGCCTGGCCCATAGTAAGGAATGAATGAACATTTAGCTTCTATAGAAGTATACCTTCTTTGTTTCTATATTATGAAACCTCTTTACTAGAATTTGTGATTGATTCTGACTGTCTATATTTACCTCATGTTGTCTTTAATTTCCATGGACTGCCAAGTCATAGAGATACTCTGATTGTAGTTTGTTGGAGGAATGATTTCTTATTTGAAGAGTGTCTGGGAATTAAAGTAATAATTCTAAAAAGATGGTGATATCATATCAACCAAATGGAAATGACATGTTATATGTTATATGTCGAATACATAAATGTTAAAGTGTTAAATACAAAATAAATCATATTTAGTTTTTTGGTAGAAAGCAAAGAGGAATATACTCTGGATTTTATACTCTGGGTTTATAGGTGCTCTTTCCTGTTGAATGGGGATTGGATAAGCACATGGTTAGGGTATAGGGAGAGCGATTATAGATGGTATTTTCCTTGTTTGGGAGCCGTGAGTTAAAATTGTAGTGTCCTGGTTTATCTAGGGGAAAGTCAAATCTTGATAGAAAACATTTACCCTTGGAAGGTCAACTCTCAGACGTTTTATTTTGGTTTCCTTCAGTCCTAATAACTTTCATCTTGCTGATCATATTTCATTCTCTTTTCAGAGCAAGGAAAAAAATTCTAAAAGTTTGACGTGCTGGAAAAATTTCCTTAAGGCATTTAGCAGCACATAGCAAATGGGGCTTTGATTCTTTTCCAAGACTTTTGGCCATAGGGTCTTTTTAGATAGGAATGGTAAAATGAAAATGAGAAAAGTAGAAGATGAAAAGGAATGGTAAAAATATCTTTTTTAGGGGGCTCTTAATTGGCAATCTGAAGTCTTGGGAGAGTCTGTTCTTTTCAGGTCTGACATGCTTTAACTGTCCTGCCTGCACACTGTTCACCAAGTAGCATTCTAAGGGTATGCGTTTGCCTTTGCTAAACCTTGTGACCTCACTTTCAATATTGTAGTCTAGAAATGACCTAAGGTAATTCTAACCTGTCAAGTAGCACATAATAACCAGACTCAACATTCCTATGAAAAATGGAAGTCATTTGTTTGCCACAAATACATTTTACACTTTGCATCTCTAAATTTAGTATGGCTAGACATGTTCCTTGTAAAAGTTGGAGAACAATATGTCTTGACATTATGTCTGTGTGATTTCTTTCATCAAACCTTAAGAGCATTTTAAGCCCTTAAAAACCAGACTTCGTGAAGACGAAGGATATACATTTAAAGGAACCAAGTCTCCTAAAACAGCGAACACAATCTGCCATTCTCATTTAAGTAATAAGACAGGAAATTGACCTTGACACTAACTTGTTAAATAGATTTAAAAGGAACATCTGCACATCTTTTTTCCTTGTGCACTGTTTGTTTAATTGCAGTGGATTAATACAGCAAGAGTGGCACATTATAACTAGGCAATTATCCATTCTTCAAGACTTAGTTATCGTAACACTAATTGATCATTTAAGGCGTAAGATAGTCTAGCATTAGGAACATGTGAGGCTAATCTGCTCAAAAAGATCAACAAATTAATATTGTTGCTGATATTTGCATAATTGGCTGCAATTATTTAATGTTTAATTGGGTTGATCAAATGAGATTCAGCAATTCACATGTGCATGATTATAAACAGAACTGGTGGCACTTAAAATGATAATGATTAGCTTATTTTGCATGTTCTCTTCCTTCCATTTTTTTCCCCCATTTTTACATTTCAGACCGAGTTTGTCAGCCTTTTTCAAAACAAAATCAGTGGAAACCAAGATCTTAAAACAAAGTGTTCAGGCATTAGAAATAACCAGAGCATTTCCTAAAGCTGTTTGCTTTTAGGAATTTCTCTGTTGCAGTCATTTATCAAGGATTCAGCTCACAATACACCAAAAGACGAGTCCATTTCAGGGACAGGTACTATGTTTCCCAGAACTTGCAGGAATGAATACGCTCATAATAAAACCTTTTCTTCCAAAAGTACAGCAGAAAAATAAAAGGGAAAAAGGAATAAATGCCTGGGAAACATTGTTCGAGAATCACTTTTTTTTTTCCTACCTAGTAAACCCCCTTTATTCTTTTCTTAAAAGGTTGTCACTGGGGAGGAAAAAAAGATCTGCAGTAGCTACAAGAAAGTGCAGTGTCACATTGATTATATGACTTGGCAGTGTCAGCCTTCTGAAGATCTGAGAAGCTTATGTTATATACCCTGGATGAGAATTCTTCATCATATCAATTTTGTTGCTTGATACAGTTGTACCCAAACAAGTGGTCTCAGTTCAGTTCAGATCAGTCACTCAGTAGTGTCCGACTCTTTGTGATCCCATGGACTGCAGCACGCCAGGCTTCCCTGTCCATTACCAACTGCCAGAACTTGCTCAAACTCATGTCCATCAAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCTGCCTTCAATCTTTCCCAGGATCAGGGTCTTTTCCAATGAGTCAGTTCTTTGCATCAGGTGGCCAAACTATTGGAGTCTGGCTTTCCTCAAATCAGAGCACTTTGGGGCACTTGTTCAGTCTCTCAGTCATGTTCAACTCTCTGTGACCCCAAGGACTGCAGCATGCCAGATTCCTCTGTCTTCTGCTCTCTCCCAGAGTTTGCTCCAGTTCGTGTCCATTGAATTGGTGATGCTGTCTATCTAACCATGTCATCTTCTGCTGCCCCCTTCTCCTTTTCCCTTCAATTTTTCCCAGCACCAGGGTTTTTTTCCAAGTCAGCTCTTCCCATTGGGTGCCCACTTGAAGGCAATTAATGAATATATCTTGGTCAAAAGAGTTGTAGGGACCTTTTATTAAAGCTGCAGTTTCAGCTCTGTTTTAAGGAATTTGTGCTATAAAATCAGTTGCTGCCATAAGCTTATTTATTTTCCCCATTCCCACTCAATCACTGTATTCTTTTTCCTTAAAAAGTTCCTTTTTAAAATTATATGTTCAGTTTACCCTTATGATTGGGAAAAGAATATTTTAAGCAGAAAACAATGTTTGTTTACTTTCAGTGAGTGATAGTTTTTATAATATTGAGAGCAATAAATATTCGTGGGGTGCACTAAAGCTTAGACAGGGATTAGAGAAACATTGGGCTTCCCTGATAGCTCAGCTGGTAAAGAATCCATCTGCAATGCACGAGACCCTGGTTCAATTCCTGGGTTGGAAAGATCCCCTGGAGAAGGGATAGGCTACCCACTCCAGTATTCTTGGGCTACCCTGGTGGCTCAGGTGGTAAAGAATCTGCCTGCAATGAGGGAGACCTGGGTTCAGTCCTTGGGTTGGGAAGATCCCCTGAAGGAGAGCATGGCAACTCACTTCATTATTCTTGCCTGGAGAATCCCCATGGACAAAAGAGCCTGGGGCCTATAGTCTATAGGGTCCAAAGAGTCAGACATGACTGAGTGACTAAGCACAGCACACAGCACAGAGAAACATGATAAGGAGGATCCCTGATATTCCTGGAATGTGGGTTTCTTCTGTGGCTATGTGAACTAAGTTATAAAGAGTAATCCTGGCAAGTAATTTTAATAGATATAACACCTATCCGGCTTCCCCAGTGGCTCAGCAGTAAAGAATTCTTCCAGTGCAGGAGATGCTGGTTCGATCCTTGAATCGGCAAGATCCTTGACACAGGAGAAGGAAGTGTCAGCCCACTACAGTATTGTTGCCTGGGAAACCCCATGGACAGAGGAGCCTGGAGGGCTACAGTCCATGGAGTCACAAAGAATTGGACACGACTTAGTGACTAAACAACGACAATAACACCTATCATTTTGTTTTGCCACAGGTAGAATTTGTTCAGGTGTCTGTTTTCTAAATGCCTCCCCACAAAAGGAGTCACTCTTTCAATAAGCTTAACATATTGACTGATTAAGATCACAAAAGCTTATAGTTAATTTGATGATGAGTTCATTTGATGATTAATGTGCCTAACAACTCACACTAGGGATTAGAAAATAAGTAGTATATAGACATTACCCTCATGGCATTTGTACTCTGCTATTTAAAGTTTTAGGTATAAAAGTAGTATTTATTAATAATACAGTTAGATAATGAAGCAAAGGCCAGAGCACATCTGTTATCAAGAAATCACAATGAACATTTTCATTTCATTTTTAGAAGAAATATGTCCTATTTTTCCATTCCTTTCTTTCCTCTCATGGGAAACTGCTCAGTAGATTAGTACTTAGGAGTTACCGGTAGAAATTACCTCCTGGTTTACTGCCTACTGAGCTATCCAGGTGGCTCAAGAATCTGCCAAGAGTTTGATCCTTGGGTGGAAGATCCCCTGGAGTACGAAATGGCAACCCACTCCAATATTCTTGCCTGGAAAATACCATGGACAGAGAAGCCTGGTGGGCCAGAGTCTGTGGGCTCTCAAAGAGTCGGACGCAACTGAGCACATACACAAATCTGTACACTGCATATTGGTATAATTGTTGTACCAACTTGGTATATTTGTTAACTGCATTCCTTTGGAACAATGTTAAGCTGTTGGGGTACATCTAACAAAAGAACACTTCAAAGTACAGCATCCTTGCTGATCTTCTTAAACTCAAAGTCAGGTATTATTGAAATAAACAAAATGTTTCTAGAGTGAGTTTTTCTGGAAAATGTCAATTATAAATCAAACTGTTTAGACTTAGCTTGAAAATGATGGATTACAGCTACTCAGAAAATAGCAGGTAGAAAACTTAACAGTTTTTCACAGCTTGAGGTTTTAAAAGAAAGGCCATTTAAAATATTGCAAAGAGATTTTTTTTATTACAAAAAAAAATCATTTCCAGAAAGCTGTTTTAAAAACACAAAGGTAGGGAATTCCCTGGTTTTCCAGTGGTTTGAACTTGGTGCAGGGGCTGGAGTTTGGTCCTTGGTTAGGAAGCTAAGATCCTGAAAGTTGTACAGACAAAAAAAAAAAAAATTAAAAAATGAAAGATAGAATAAAGTGATTTATTTTCCATCTTCAGCATATATGCCAGATATTCATCTGAGGATATGATAATGAAACAATAGAATATAGAAGAGTTTGGAGTAAAAAATCCAGATACATGTAAATATATTTGCTTTAGTGAATGATAAAGGCATGAAGTTCAGTCTTAGCAAATGACTGCTGGATTCAAGTATTGAAGTTTCAGGTAAGTAAGTATATTTTTCATACCACAGTAGGCCCAATTAATAAGGTCTAAAACTTGAGTTACATCATGTTTACCTATGGAATCCACTGTTGGGATGATAAAAATTGTGAACTTTGATATGGGAATGAATTTAAATGTATTTTCACTGACAGGTTTCTCCTCAAGCTCACTATTGCAATGGCTAGATTCCTTGTTACCCATCACTGGAGAAAATTTTAGTTAGAGATATTAGAGGAAGAACAACTGGTTGTAGAGAAAGAAAGGAAAATCTCAAACTTGGGTCTGTGCTGTCCAAAACAGCTTTTCTTTTCTTGTGCCAGCCATAGGGATCTCCAGCTTTCAATATAGGTGCCAAGTAAGAACATTGCCAGCTAGGAGATAACTAAATATAGTGGTCAGCTTATCAGATACTAGAATTTTACCATGACTTTGAGGTCATGTTACATGGGAATCTGACATTCATGTTCCATGGGAACCACTTTGAATTACTACCAATTTGGTCAAGAGTTCATAATTGCATATCTATAAGGTCTATTATGTCTTTTCTTCAACTATTTTAAGATTTGTGAATCATCTTGAGACAAATACGTAGCTTGGAGTAAATCACGCCTTCTTTTTCCCCTTGGGAATACTATTTGCCACCATCTCCCCTTTCCTTGTTGAAGGTTAACTGACTTGGAAAATAGTTGAATATTATCATTTTGTTTTTAACTAAACTGTACAACATGCCGTGATGTCCTCAAGCTAATTTCATAGTGGTTGTTAAAGTCATTCTCAGGGTCGAGAAAGGATTGCAAATACCTGCCTCAAATTCTACTTCATTGATAAGTTTTTGAAGAGTGTTAGTATTCTCTCAAGAGTATGGCTGTAAGTAGATTTTGAATGAAGTCTTTAAATAAGCTAGCTAATTTGTATGTATTCATAAATTATGCAGATGGTCTCCTATTGATGAATAAGAATGAATGACCCCACGAATCACCCAATCAGCCTACACATGGAACCTAACTCCCTATTCTGAAGAATTTGTGCTTGCTTGATGGCTGAGAGAAAATCGGAGTGTGAGGAAGTAGTGTTTTGTTTTTTTGTGTGGACATAGTTTTAAAATCAGCATTTATGGATAGAAATGGGAGGATACCAGCTTCACTATGGAATTTTTAGAACTTATTCTCTTGCATCTAAGTCTGATTGTAAAGAAAAAGCTCCCACCATTGCTTGTCTCAAAATTTTCCAGTTATGAAGTGATTCTTGAAATTCTCTTTAAGAATAATCAAGTAGAAAGAAATACTTTGTAAATAAGGCTTGGCTCTTATTTAACGGTCATGTTAAAAGGGTTTAAGCTCACTAAAATTGTAATAATGTGGAAGATACGGTAGGTAAAGGAAACTACCTCATTCTTCGAAGGTTTTGTCAAAGCACAATTAAGCATTCTAAAATGGCTTTGTTACATGTGAACCATCTGGTGTTAAAGAACTATATTTGTAATGTCTAAAGGACTTGGAATAATTGTATTTTGCTGGCAATAGTCACATTCTTTATTGTTTGCAGGTTCCTCATCAAGTCTTTAATTATACACTGTTTTTGTCAACAATAAAGCAATTTCAAGGATTCC EMBV3_26093 GGCAGGAGCAAACTCTTACGTGGGACCTGCTGGGACAGTTTTTGGAGCCCATGATGTTTA Gene GeneID:504856|MLLT4:XM_002690394:17_cdna Constitutive 0 NULL GeneID:504856 9 GENE MLLT4 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 EMBV3_19829 ACTGTACTTATGAACACTAGACGTTCTAAGCTCCCTACCTCCACCACCCGAAAACTCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08806 GGAAGCAGTCACATCAGCTACTACTAAGGAAAAGAAATTCACATATAGGCTGTGCTTCTC Gene GeneID:281512|TAC1:NM_174193:9_cdna Constitutive 2 NULL GeneID:281512 4 GENE TAC1 TAC tachykinin, precursor 1 EMBV3_13295 GGTAAGGGGGACTTTTATTACCATGCTGCTGTATTTGGCGGTACTCCCATTCAGGTTCTC Gene GeneID:527409|MGC151949:NM_001077974:156_cdna Constitutive 0 NULL GeneID:527409 11 GENE MGC151949 NULL similar to glycoprotein galactosyltransferase alpha 1, 3 EMBV3_07993 CCTTCCAAAGCAGACCAGTGGCAGTATCAGCTGGCAATACAACCCTTTTAGCACCTTTGG Gene BVV0102_080360 + 0 NULL GK000027.2:32685825-32706245 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02967 CCTGCTAATGGGCTTGCTGTGAGAAAAAGGGACAGTCAGGTTGATCCTTTCTGGCATGTC Gene BVV0101_019613 + 0 NULL GK000029.2:979366-990200 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162872 TCONS_00162874 1 XLOC_099750 Coding TCONS_00162874 XLOC_099750 Coding Coding VSTM5 29:950258-981740 j TSS122201 2949 3 TCONS_00162874_2 77 0.0603594438792811 4 0.906451510434865 0.000409802645154397 0.00057900274567839 0.000445680811569115 0.000346146036472567 4.00541793424371e-05 3.0823542148195e-08 0.000179806938493762 0.000228697409897403 1.03124244847482e-07 1.27741041752397e-06 0 0 3.00902068039067e-05 0.00011313497236031 1.29269845653761e-12 0.00018741172204105 0 0.000314213587169828 0.00065879479716055 0.000267908272648702 0.000140951842763986 5.26589709944395e-05 5.57704572232606e-05 0.000198559573661646 0.000234767947470743 0.00017422140673882 0.000106319867295801 0 0 0 XM_005226642.1 VSTM5 PREDICTED: Bos taurus V-set and transmembrane domain containing 5 (VSTM5), transcript variant X1, mRNA. 0.0 1555 100.00 0.291963377416073 NM_001144871.1 VSTM5 Homo sapiens V-set and transmembrane domain containing 5 (VSTM5), 6e-180 636 82.75 0.194303153611394 0 coding 0 0 1 1 -0.0320392960390072 0.858914953845532 -0.0120596728104987 0.805694821012407 ATGAGGCCGCCGCCGGGCGGGAGGACGCGGAGACGCGGCCTCTCGCTGGGAGTCCTCGCCCTCTGCGTGGCCGCCGCCCGCTGTCTGCAGACCAGCCATCAACGCCACGGTGGAAGAGGACATCCTGCTCTCGGTTGACTACTCCTGCCACGGGATCCCCACCATCGAATGGAAGTACACGTCCAGCTGGGGAGTGCAGAAGATCGTGGAGTGGAAGCCGGGGACTCAGGCCAACATCTCCCAGAGCCACAAGGACAGGGTGTGCACCTTCGACAACGGCTCCATCCAGCTCTTCAGCGTGGGCGTGCGGGACTCCGGCTCCTACATCGTCACGGTGACCGAGCGCCTGGGGAGCAGCCGGTTTGGCACCATCGTGCTGCACGTCTCAGAGATCCTCTATGAAGACCTCCACTTTGTCGCTGTCTTCCTTGCTTTTCTCGTTGCCGTGGCGGCGCTGCTGATCAGCCTCATGTGGGTTTGTAATAAGTGTGCCTATAAATTCCAAAGGAAGAGAAGACACAAGCTCAAAGAAAGCACAACAGAGGAGATTGAGCTGCAGGATGTAGAGTGTTAGCCAAGGCCAGACCCAGTGACATTCCTACCTCAAGAGGAAGACGCGATTTTCCAACGAAAGGAACACATGCGGCCAGTCCTGCCCGAGCCTCTTGTTCTGCCGTAGCCACACGTTGCTGCTGGGATAGCTGCATGTTGACGAAGATGACTGCCTGGAGCTGGACTGTGGCTGGGACCACGTCAGTCCCAGTGGCCTGGAGGTCAACGAGGAGGAGGGCGGGGCTGTGAGCCCGCGCTGTGTTCAGCCCTGGGGCCACGGCAGCCCAGTGCCCGGTCTGCTTCCTCACTGCACTCTGCTCTGGCGGGGCGGGGGTCACTGGAGGGGTCCCCATGGACTGTAGCCCACCAGGCTCCTCTGCCCATGGGATTCTCCAGGCAAGAACACTACAGAGGGTTGCCATTTCCTCCTCCAGGGGGTCTTCCCGACCCAGGGATCGAACCCGTGTTTCTTGTGGCTCCTTGCCTTGCAGGTGGGTTCTTTACCTCCTGAGCCATCGGGAAGCCCCATAGCAGAGGCGGGAGTATTTCCAGACCAAGCATGCAGCACTCTAACATGCTCTCTGTGCTCTAGTCTTCTCTGCCTGTGGCCGCCTCCAGCTTCTCCCATGGAGACTGCTGTGAGCACCTCTCAGAGCAGGGAGAGCACCCCCTCCTCCCTGTGGCTTGGAGCTTTAGGGAGAAGAGCTAAATTTGTTCTGGGGGGACCACCATTGGGAACAAGGGACAGGGAGAGAATTGCCTCTTTTCCTCTCTCACTCCAGCGTTAGACTTTCCCTCCTGAGGCCCCAGGGGAGGCCACTGTGAGGAAAGCAGCTCATCTCCACGTGGGCGGCCCCCTGACAAGCTGGGGACACCACCTGTGTGAAGGCTGAGACCGCAGGATGGGCAGGAAAGTCACCGTGGGCTTCGAACCTACCCCTTCAGTCACTCACGCTTCCCGGCACGCCAGGGCCTCCCTGGCTCCCAGTGGGCTGGGGAACACCTGGCCCTGACCTACCTCACCCTCAGAGTATCAAGTGAAGCCCACAGTAGCACAGAGCACTCCGAGCAATTAAAGGAAGCTGTGAAGAATCTTCCAGAGCCTAGGACGCAATGAGAGCTATGCCAGGTCCTGGAGAAAGTCAAGCACCCTGGAGTGCTGGGGCTTCAGGTCCACTGGGGATGGGCCACAGCTGGTCCTGGCCCTTAGCTTCTGAAGTCACTGGCCACCGTGGGTACCTGTATCTCTCCGTGCCAGCCTCCTTTCAGCAAGTTCTAAAGCAGGCCTAATTTATCTTCCATTCTCCTTTTTTTCTCCAACATTCTTAGCTACAAATCAAAGGTACCACTCCATTTATTGGTGGAATTTGACCTTATTAGCTGTGTCCCCAGCCCTCAGCTGCAGATTCACCCATGCACACATGAAGGAGACCTAGAACATTCTCTTCTCCCTCCCTCCAAGTCCCAAGTGTCCATATCACTTCAAGAAAGTTGCCTGGAGACATTAGTATGAGGCTTTTGCCTACATACTGTCTCCAGGGTTGCAGGAAGGAATCTTTTGGGGTTACAGGAGCTATCATTGATCCAGAGGCATTACTTGATTCAGAATGCCAGAGAGCAGCTAATCCGCATGACTGATTTGTAGCCCAAGTGCATGACAGACACGGGCCACCTCGGGCCACCTCGGTCACAGAGGTGTACACAGACACACCTGTGCCCTTTCCCCACGCAGCACCCAGTGGAACCAGACCTCCGCCATGGAGGACAGGTTTCTTGTACTGGTCTCCAGCACCATGAGGAAGCAGGATGAGACATGCCAGAAAGGATCAACCTGACTGTCCCTTTTTCTCACAGCAAGCCCATTAGCAGGAAATTGGATTAAATCTAGTTAGCTGCCAGAACCTCTGTCCTCTTGACAGCTTACCTGCTTTCCAGAACTCTGCCTCTCAGCTTCTCAGAAGTCAAGGGTGGTAATCTTCGTATAAAAGGAGAAGTGGAAAAGAATACCCAGCGAGACGTACCAATCCAGATATAAATTAAATTTGCTCCCCCACCCCAAATCTTCATCAAAGGTTGTTCCTTCAGCTTTCCATGTCTCTATTTTGCACTTTGAAAGCTCCCCCCAGTTTGAATATTCCTGTGGAAAGTTCTTGATTCTTGAGCCTGGGAGTTCTATTTTCCAAAAAAGAAAACATTAAATCATAGAGGTTTAGCCACTGCACATGTTAAACTGCAAGTTATGTTTCAAGCTGTGAAAAAAAAATGAAGTTTTAAAGGCTGAAATAAAACCTAAAAATAAAGCCCCGATCCTTTATTTGTGAGCCTATCCCTGCAGAGAACTCAGAGGCCTAGAAGAGGTTTCTGTCAGCTGCAGACAAGCAAAACCCTCAGCCAGAG EMBV3_09129 GTGGCTCCCAGAGATTGTGCTGGAGAACAATTCGCTCAAGTACACGACCAAGGAGATCAC Variant GeneID:281687|CHRND:NM_174271:31_cdna 351^506 2 EMBV3_31325 GeneID:281687 2 GENE CHRND NULL cholinergic receptor, nicotinic, delta EMBV3_32238 CCTGCTGGTTACTCTGGCCCTTTGCTACTACGAGGCCAATGCAATTGTCTGTCCAACGTT Gene GeneID:338419|SCGB1D2:NM_001077807:31_cdna Constitutive 0 NULL GeneID:338419 29 GENE SCGB1D2 LppAB secretoglobin, family 1D, member 2 EMBV3_15865 ACAGACTCAGGTAAGAACTGGCTACAGTCCTTTCCTCCCAGAGAAAGCTGTGATCTCTGC Gene BVT0102_214385 + 0 NULL GK000007.2:23425368-23443527 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20124 GTGATCTGTGTCCAAGCGTAAGACAAGATCTTCCCTGGTTTATCTTCGTGTATACAGAAA Gene BVT0102_200394 + 1 EMBV3_19730 GK000014.2:23068104-23106219 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26245 TCCCTAGAAATCCTGGTGGACACATCGCTTCCAACCTTTGTAGCTTGCCTACTTTTCCCG Gene GeneID:531794|GUCA2A:XM_002686452:467_cdna Constitutive 0 NULL GeneID:531794 3 GENE GUCA2A NULL guanylate cyclase activator 2A (guanylin) EMBV3_41187 CTCTGTGGAGTGCTGGTGCTGGTGTCCTGGATCATGGGTGTCCTGAATTCTTTGCTACAA Gene GeneID:504888|LOC504888:XM_002688618:404_cdna Constitutive 0 NULL GeneID:504888 7 GENE LOC504888 NULL similar to CfOLF4 EMBV3_18682 TGGTGGAGAACCATGGGGAAAACTATAAGGCTATGGCCCGGGATGAGAAGAATTACTATC Gene GeneID:506421|NOP16:NM_001014856:87_cdna Constitutive 2 NULL GeneID:506421 7 GENE NOP16 HSPC111 NOP16 nucleolar protein homolog (yeast) EMBV3_15736 AGTCTCCAGGAAAATGCGGAAAGAATGGCGATAAGGATGCTGACCTCAAGGAACCCAGTA Gene GeneID:534612|ARID4B:XM_002698795:169_cdna UTR3_Alt 3 NULL GeneID:534612 28 GENE ARID4B NULL AT rich interactive domain 4B (RBP1-like) EMBV3_22554 GCCTGACGGAGAATTCAACCACTGGCCTTTTGGAGCTTCACAGTGTTTACCGATGCTGCT Gene GeneID:539630|CYP27B1:XM_002687556:572_cdna Constitutive 0 NULL GeneID:539630 5 GENE CYP27B1 NULL cytochrome P450, family 27, subfamily B, polypeptide 1 EMBV3_32648 CCACGGATGGTTTCATCTTGCTCTGGGGAATTTCATGATCTCACGGCACCTTTTTCAAGC Gene GeneID:509726|ODZ4:XM_002699058:64_cdna Constitutive 0 NULL GeneID:509726 29 GENE ODZ4 NULL odz, odd Oz/ten-m homolog 4 (Drosophila) EMBV3_34393 GTGAGGTTTGGACTCATGCCGAGAAGCCTGCAAAAAAGCACTGTCAGGTAGGATTAGAGG Gene GeneID:510905|MFAP1:NM_001034397:211_cdna Constitutive 0 NULL GeneID:510905 21 GENE MFAP1 NULL microfibrillar-associated protein 1 EMBV3_05359 ACACAGACACAGACACAGCATCCCTGACCAGGCCACTTTCCCTGCCGTTAACACCATGAA Gene GeneID:505394|APOA2:NM_001045916:236_cdna Constitutive 0 NULL GeneID:505394 3 GENE APOA2 MGC137013 apolipoprotein A-II EMBV3_41918 GACGTCAAGATGCTTCACTCCAACAAGGACAAGCTGCACCTGTACGCGAGGACTCGGGAG Gene GeneID:518756|RGMA:XM_002696508:98_cdna Constitutive 0 NULL GeneID:518756 21 GENE RGMA NULL RGM domain family, member A EMBV3_37146 CAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTGGACTGTGTGGATCAC Gene GeneID:517231|MGC165939:NM_001102041:118_cdna Constitutive 2 NULL GeneID:517231 12 GENE MGC165939 NULL Uncharacterized protein C13orf18 homolog EMBV3_27676 CAGTTTTGAGAACACAAGCATCTGGGAAGGTCAGGATCTGAAGGGGGACACGTTTGGCCT Gene GeneID:100298352|LOC100298352:XM_002698129:445_cdna Constitutive 0 NULL GeneID:100298352 25 GENE LOC100298352 NULL hypothetical protein LOC100298352 EMBV3_34837 GGGGCCGAGACTGACAATGCTATCCCGGAGACATTTGTTGGACGTTTCCGCCGCATCATG Variant GeneID:538943|GINS3:NM_001076136:369_cdna 317^550 2 EMBV3_37255 GeneID:538943 18 GENE GINS3 MGC139995 GINS complex subunit 3 (Psf3 homolog) EMBV3_23684 CCTCATCAGGTTTTGCTGGGTTAAGAGCTGGGCGTTGGTCCATGCAAAGTTTGGGATACA Gene BVV0102_299321 + 0 NULL GK000016.2:59978470-60651032 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069801 TCONS_00069805 TCONS_00069813 TCONS_00069796 TCONS_00069810 TCONS_00069802 TCONS_00069804 TCONS_00069811 TCONS_00069798 TCONS_00069812 TCONS_00069814 1 XLOC_042064 NonCoding TCONS_00069802 XLOC_042064 NonCoding NonCoding - 16:60313043-60551104 - TSS51970 808 3 TCONS_00069802_1 49 5 0.996626900781316 0.000113637462524296 0.00017874811993472 1.28424805211283e-22 1.04093568177038e-24 0.000372880488151445 1.2791379382603e-250 0.000258697773703559 0.000581950428322503 0.00106411675139686 3.3521795084775e-22 0 0 7.2120078641426e-06 0.000448271532541863 0.000229312252941907 0 0 0 0.000426995260070902 0.000100405369356874 0.000333636690078189 0 0 3.85408361806337e-20 0.000176166601508997 0.000428066343468083 0.00046967618831976 0 0 0 XM_005198719.1 LOC101904953 PREDICTED: Bos taurus ferritin light chain-like (LOC101904953), 4e-11 73.4 73.81 0.150990099009901 XM_486478.7 LOC434624 PREDICTED: Mus musculus ferritin light chain 1-like (LOC434624), 1e-12 78.8 77.27 0.133663366336634 0 noncoding AGCAGAGAACTTGGGGGAGGGATCTCACTGGGAGGGCCTCATCAGGTTCTGCTGGGTTAAGAGCTGGGCGTTGGTCCATGCAAAGTTTGGGATACAGACTCCAAGAGGCCTGGGTCAAGTTCTTCTCCGGGGCCACCATGTCTTCCATGGTGTACAGGGCTTTACCCCATTCATCTTGGGATGGTGTTGGCCCATCCAACACCGTGAGATGGTGTTGCTCTCAGTAGAACAAGAGCAGCCTCTGCACTGGTTTTGTGTCTACAAGAGACACTGGGCACCCTCAAGCTTCTCCTTGGGACTCATGGAAGAGGTGGTCCAAGCCTTCTGGACCCCACTGTCACAGTTGAAATAGAAGCCCAGAGAGAGGGTTTCTGTTGATGAGTGAGCTTGGAAGCTGACTGCTCGTAGCACCAGTGAGGCAGCCATGAGCCCTTTGAATTCATTGTTCTCATCCTTACTGAGGGACCTGGAAGCCCTGTAGCAGTCCCGGAGTGATGGGACTCCCTGCCTGGCCTGAGATACCCAGTTAGCACCTGCGAATCAGAATTTCCTCTTCGCAGCAATAAAGCATCCAGCCTTTGCATCTGTGACAGCCTCCCCTGTAATTTATGCATTCTATGGAATCTTTCCTGGTGATTCAAGATAGGACTCTGTCACATGTGCTGCCAGGACCCTTTGTCTCAGGACCAAGAGAAAGAGACAGGGAAGGTCATCACAGAGCACCAAGCTGAGATCCTTGTGCTTTATACATGGTTGTGAATTTATGTCAATCCCAATATGTGATATAGAATAAGAACTGTCAAAGACC TCONS_00067765 TCONS_00067766 TCONS_00067767 TCONS_00067768 TCONS_00067769 TCONS_00067770 r 3' 334575 TCONS_00069831 TCONS_00069832 TCONS_00069833 TCONS_00069834 TCONS_00069835 TCONS_00069836 TCONS_00069837 TCONS_00069838 s 3' 195649 EMBV3_20738 GCGAACCGATTGAAGATGACAGTGATGCAGAAACCTATGGAGAAGAGAATGAAGAACAGG Gene BVV0102_456836 + 1 EMBV3_27988 GK000030.2:15472117-15527586 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013343 1 XLOC_008097 Coding TCONS_00013343 XLOC_008097 Coding Coding AVEN 10:28592758-28788422 = TSS9931 1713 1 TCONS_00013343_3 441 7 0.991280926899823 0.00130583157049963 0.00104109865235172 0.000192400350964477 0.000494791736133198 0.0005947196177231 0.000168247672615962 0.000564227280609361 0.000486079220882248 0.000552575117686642 2.48542205030386e-05 9.82935635984668e-05 5.0825970585992e-06 0.000209465170031515 1.51652707791439e-05 5.27485056435393e-05 0.000483391210639275 4.95986534268646e-05 9.75593896674749e-05 0.0015612742438874 0.00152793998879696 0.000125311611171384 0.000861141332565002 0.000183358659409504 0.00013376749091819 0.000355703261619134 0.00138088922936325 0.00079690704148727 4.80426091290962e-05 2.87961901586887e-05 9.70242175184954e-05 XM_002690781.3 AVEN PREDICTED: Bos taurus apoptosis, caspase activation inhibitor (AVEN), transcript variant 2, mRNA. 0.0 2913 100.00 0.942206654991243 NM_020371.2 AVEN Homo sapiens apoptosis, caspase activation inhibitor (AVEN), mRNA. 0.0 1323 78.94 0.880326911850555 TCONS_00013343_3 sp|Q9NQS1|AVEN_HUMAN AVEN_HUMAN Cell death regulator Aven; 7e-132 389 77.54 0.643990929705215 0 coding 0 0 0 0 -0.16267428052424 0.32903443323232 -0.0147381865217242 0.769229616844821 ATGCACTCACTCCCACTGGTCAGGCCTTTCCTACAAACCCTCGGCCCTCCCGGAGCCCCGGCTCCGGCCCCACCTGCCAAGCCTCAGGGCAGCCCCGCCCCCGCCGCGGCCGGCTTCCATCCCCGGCCCCGCACCCCGCGCTCGCTGACACCTAGGCCCGGCGCTCGCGGCTCCTCCGTGGGGCCCGTTTCCGGTGGGGCAAGGGCGTCTCTGCGGGCGGCCAGCTCCCGCGCGCTCAGCATCGCCGGCGGCAGCCAGATGCAGGCGGAGCGAGGAGCTCGGGGCGGCCGGGGACGCCGACCCGGCCGCGGCCGGCCGGGCGGCGATCGCGACCGCGAGCGGGCGGGCGCCGGGACCGCCGTAGCGAGAGGTGGCGGTGGAGATGGAGGCGGCCGCCGAGGCCGCGGCCGGGGATTCCGGGGCGGCCGCGGTGGCCGAGGAGGAGGCGCCCCGCGAGGCGGCCGTCGGGAGCCGGGAGGCTGGGGCGCCAGGACCAGCGAACCGATTGAAGATGACAGTGATGCAGAAACCTATGGAGAAGAGAATGAAGAACAGGGAAATTATTCTAAAAGGAAGATAGTCTCTAACTGGGATCGATATCAAGATACTGAAAAAGAAGTTGATAATGAAAGTGGAGAATCACAGAGGGGGACAGATTTCAGTGTTCTTCTCAGCTCTGCAGGGGACTCCTTCTCACAGTTCCGGTTTGCCGAGGAGAAAGAGTGGGATGGTGAAGCTTCATGCCCCAAGCAGAATTCAGCATTTTATGTGGACTGTGAGTCATTGGTTCGAGCCCTTCAAGAATTGCCTCTCTCACTCCGACTCAATGTTGCTGCTGAATTGGTTCAGACTGCCCTTCCTTTAGAGCTCCCTCAGGTGAAACCGAAGAGAAATAACGATGGCAAGGGACTAGGGATGCAGCTAAAGGGGCCCTCGGGGCCTGGAGGAAAGGGGTCCCTCTCTGAGATGAAATCCACCACCACTGGCTTCCCCGTGTACCCGGGTAAAGACGGCCCAGGATCGGGTCCTTCCAAGGGTTGTCAGAATCCCACTTCCCTGCTGCAGTTGGCAGCAGATCATTTGGAAGAAGAGCTAGATCTGCTGCTTAATTTAGACGCGCCTGTGAAAGAGGGAGGTGACATCTTATCAGACCAGACAGCTCAGGACCTGGAATCTGAGAAAAGGGGGGACCTGGTCCAAGCAGCAGCAGAACCTGCAAACCCATTTGTGTTGGAAGAAAAGAACGTGACCTCGGGGCAACCAAGTATATCCAGAAATGTTACCGAGGAAGAGCTTGAAGACTGGTTGGACAGCATGATTTCCTAATGACAAGGAAAGAAAGGGAAAAAGAGGGAAAAGAAAATGAAAACTGCCTGAAGCCAATTTTGGTTGCCTTGTAAGGGTGCGCAGGCCCAAGGCTGTCCTAGAACAGCTGGTTTACAAGCATGACCCCAAGCCCATGTGTCCATCACGCTTAGCACAGTAGATGCCTTCCTCCATGTTCAACAACATCTGAAGTAGACGTTTAAGAGGCTCGCTACATTTGTTCTCTGGCTTTAGTAACTGAATAGATGTCTTAAGGGCAAGAGATGTTTCGGCCCTTGTTTCCAGTGTCTTCCTCTCTGTGTTTACAGCATAGCAGGTGCTGCTGATGAAGAGAAGAGAGCTAAGCAACCAGGCATGCATTTGGCCAAAATAAACACTGGTCTGTAG EMBV3_35113 CTGCTGGTCCTCAAAGAAATCTACCAAACCCAGGGTATCTTCCTTGATCAGCCTTTACAG Gene GeneID:513116|DDHD2:NM_001075598:62_cdna UTR3_Alt 2 NULL GeneID:513116 27 GENE DDHD2 MGC139315 DDHD domain containing 2 EMBV3_34765 AGTCATAGAAGAACGCAGCGCTTAGCTCGGAGGATACGAAGGGAAACCGGCGTCTCAACA Gene GeneID:506232|WDR45L:NM_001075247:54_cdna Constitutive 1 NULL GeneID:506232 19 GENE WDR45L MGC139599 WDR45-like EMBV3_39092 ACTTTTAGCAAGAGCTCACAACTCATCAGCCACAAGAGATTCCATACTCGGGAGAGGCCC Gene GeneID:540408|ZNF445:XM_002696878:313_cdna Constitutive 0 NULL GeneID:540408 22 GENE ZNF445 NULL zinc finger protein 445 EMBV3_08221 GACCCTGAGATCGCGGCCTTGATTCGGAAAGGAGAAATTGAGCGGTGCACGTACATCAAA Gene GeneID:523235|LOC523235:XM_002687072:226_cdna Constitutive 0 NULL GeneID:523235 4 GENE LOC523235 NULL similar to transmembrane protein 178 EMBV3_31381 CTGAAGTGGAGCTGAAACAGCCCCTTTCTTTGCCTTCCTGGGAACCAGAGGATGTGTTCA Gene GeneID:525419|RBM20:XM_002698508:87_cdna Constitutive 0 NULL GeneID:525419 26 GENE RBM20 NULL RNA binding motif protein 20 EMBV3_06501 TAGTAGTCGCAGACCTCGAAATGATAGACGGGTAGTTGAGTTTGCCTCTTATGGTGACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09840 AAGAGGCCACTGGCTGGACAAATTACGGAGGCCTGGGCGGACGATGTGGGGCGCTTCTGG Variant GeneID:506830|MPPE1:XM_002697747:253_cdna 860^968 2 EMBV3_39904 GeneID:506830 24 GENE MPPE1 NULL metallophosphoesterase 1 EMBV3_03065 TTGCCTTTGAGGCTGAGCGGAGCCTCCCACTGAGGCTCGAGCTCCGCACCTCCTCTGCCT Gene GeneID:100295034|LOC100295034:XM_002685064:175_cdna Constitutive 0 NULL GeneID:100295034 1 GENE LOC100295034 NULL hypothetical protein LOC100295034 EMBV3_33538 AGTAGCTCAAAATTGACAGACTGTGAACTTGAAGTTTACTTATGTAAAAGGCTTAGGAAA Gene GeneID:506017|RBM12B:XM_002692820:156_cdna Constitutive 1 NULL GeneID:506017 14 GENE RBM12B NULL RNA binding motif protein 12B EMBV3_09773 CCCCAGTTCTGATGGGATTCATTATTCATTCCTTTTTTGGATAGATATTTGGAAGCTGGG Gene GeneID:520143|EAPP:NM_001075800:26_cdna Constitutive 3 NULL GeneID:520143 21 GENE EAPP MGC139672 E2F-associated phosphoprotein EMBV3_25683 CCCTATCAAAAACCCATCCCGGTGGAAAGATTCCCAAGGAGAAAGACACTGCATGAGAGT Gene BVT0102_023854 - 1 EMBV3_07191 GK000016.2:74850198-74993030 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070219 TCONS_00070220 TCONS_00070218 TCONS_00070221 1 XLOC_042159 NonCoding TCONS_00070221 XLOC_042159 NonCoding NonCoding - 16:74940524-74944188 - TSS52185 3568 2 TCONS_00070221_1 137 0.110706278026906 2 0.0264810264810265 0.00016255810320314 4.53090658721257e-05 0.000268947006673619 0.0002237090753923 6.79960457303186e-05 0.000350063334305391 3.84780594931543e-15 0.00017299200551166 2.78912196574634e-05 0 2.3957915757499e-09 2.45379299338796e-05 3.10833426541176e-05 6.85851964639088e-08 2.0930969396419e-174 0 0 2.55297823970442e-08 8.33790687930869e-05 0.000333053746540458 8.84066541443491e-12 2.17088951415393e-08 0 0 0.000285316540462487 3.30870781280545e-05 0.000367719388872704 8.40696099854512e-09 0 0 0 noncoding 1 0 1 1 -0.192842298883604 0.261927214603947 0.020309288531181 0.791241016336356 GACATACTAGGTTAGAGGAACTCCAGCAAAGAGGCTGTTGAGAAGGGAGTGTGTGGGGTTGGGGTTGGAGGAAAGAAAGGAGCAGCTTCATAAACTCATCACCCATCTCCCTCTCCCGTCCAGTCTCCACCCCGTAGAGTCTGTCATGCCACTTCGCTGAAGGATGGGTCAGACCATGCTTCCTTTACCCAAGGTGTGCCCTCTGCACATCCACCCCTTCATCTCCACTCCTTCTGCTCATACCAGGCAAACAGTGAGGCCCACCCACTCCTGTAGCCCTATCTCCTCCGTCTCTTTTCAGGGACAGGCCTCTATCCTGCCCCTGCTGCCGGGGGAGATAGGGGCCCTACGTTTCTCAGAAGGCTCCCTCATTGCCTTCCTCCTGAGGCCCAAGTCTGGCGTATCTGGCCATGCCCTCCGCACCCCCCGACCCTTCCTGGAGCAGGCCCCCTCCTCAGCTTCTGAGAGCCTCAGGAAGAGAGTAGACAGGAGGGAAAAAAGCAGCTCTTGTACGAGATTAGCCTTTCGCCTGTCTGAGGCTGGATCCTGCCCTCCCTGGGGGGCTCAAAGCTCTTAGGCTTCTCTTCGAGCTACCAGGCAACTGGCAGGGACTAAAGAGCTTATGTTTCTTAAGTGGGAGTGGCTGGTGTTTATCAAAGACTCATGTGCGGGCTCCAGAGGCCCCTCTAGACGGTGGTGGAGGCCTGTCCCGAGCTCTGTGGAGGCAGGAAGTTCCCGGCTGGGCTAGGGCTTGCTGGCTTTGCTGGAACACTGGCAGGATCTGAGGGAAGCATTCCTCACGAATGTCTCCTTCAGAGGCTGCTGGATTCCTTTAACAGCTAATTAGTGAGAAGTCGCTACTGTGATGGGGGCTGACCCAGGCCTTCCTCCACCTCCTCCTAGGGGTCAAGGCCCCCGGGGAGGCTGGCCATGCTTTACTACGGCCATATTTCCTCCCCGACGTCAGCTGTTTCTTCAGGAGTCATCTCTCCAGCTTTCAGCCTTTTTTTTTTTTTTTTTCCCCTTCAGAAACAGGCTTTTCCCTGACAAGTTTGCAGCTCAAAAGGAGCCGGCTCCTCTTAACTGTTGAAATCAGGCGCATCTGGAAGCAGTAAACTTTTCAACAGGCTGAGAGGAAGAAAAGACATATTGTAGGGGATGGATTCACCTCTGGGACTAATTATTCTTTATATTTCACCCGTCACATTTACAATCTTCGTCAGAGCAAAGAGACAATAAATGATCTCATTAAAACCCAGAAAGATGCTTCTCCCTGTTGAGAAGAACCTTGTCTCAACGCCCTGATCTCTGACGAGAGGGTCGTGTCAAGGAGGCTGGCGTGGGGCCTGGGGACCAGGGATGGGAGGGGCAGGGCTCTGCCAAATGTTTTCCCTTGTTTGAATACAGTATCTTATTTTTTCCATCACTGGAAATATCCTTGTGAGTCTGAAATCAAAATCTTCTCCAGCCACAATTTTCCCCCAGAGGCAGAATCCTGTTGGGGGTGGAGGGGGGTGGGGAGCACAGTGACCCAGAGAGAGAATGGGATTGTGAGGTTTAAAAAAGTATCTACACCAAGAGAAAAAGCAAGAAAGGGAGGAAGAAAAAAAAAATTATCTCAATCATCTCTCTTCCCTATCAAAAACCCATCCCGGTGGAAAGATTCCCAAGGAGAAAGACACTGCATGAGAGTCTTCCAGGGCTGGGGGGACTCCCACAGAGCCATCTCCCTTTTCCAACTGTATGTAGGGGTGCCCAGAAGGGGCCACCACCCCCTAGAGTCCTCCCAGTCCACAACTCCTTATCCTCCACCAGCCCCAGTGGCTTTAGGGCAACTTAGAAGCGATTCCCCCGCTCCTACTCGAATCCCCAGTCCCGGGGATGTGCGCAGGAGGAGAAATTCTCTCTCCTGGCAATCTTCCCAGGCGTTGGCCCCGAGGTGGCCATGCTGCTGGGAACTCCTGCTGAAGGGGGCTGATGGGGTCCAGGGCCTTGCTATTTAAAGTGTGATCAGAAGCATTAACATCACTTGGGGAGCCCCTTCCACTCCCACGTCTGGGACATTTTAACAAAACCTCCAGGTGATCTGTATGAATACTAGAGCTTGAGAGGTAATGCCCGAGGCCAGAGTTTCTCAATTTTTCTCTTAGCTCAGCTCACCTGGAGGGCTCTTTAAACCTCAGGATGCAGACCCTTAACCGCAGAGATTCTGACTCAGCTGGTTGGAGAGGCTGCAAATTTGTGTTCAGATACATCTGCAGGTGGTATGGTTGCTGCTGGTCCAGGGACCACACCAAGCTGATTCTCAAGCATTCCTAGGTGCCACTTGAAGAAATGCAGATTCAAAGGTCTTGTCATCTAGTAACAGGGTCGATAGAACAACAGGCATCTAACACAGCTGACGGCACTGAGTGAATGAGCCAAGATTTGAACCCAGATATGCCAGACCTATGCTTTCTCACCTCATCACAACTTGCCTTAAGAAAATCATTTTCAAGATGGTGAGTCCATTTCAATTATTTTAGCTTCATGATCATAGTTGAGTCAGCTGTTCATAGGGTTTCCCAGAGGTGATTTTATGGGTCTCTGGAGCCTGGTTAATGAAAAGATAAGACTGTTTGGTGCTGAACAGCATCCACCGCCATGCTGGTAATATCCTACTTAGAAGCACACCAAATAAAGTCAGTGTGCTTTCTCTGACCTTGCCTATCCTTTCACTTTACCCTTATGAACAGTTTTGTTTTTGTTTTTTTTTTTAAGAAAAAGCTAAAAGACCCAACCCTTTCTTTGAAGGTCAGAATGATCAGCTTTTGATTTAGCTTGTCTGAATTGATGAGTTCACTGTGTATCCACCTCCAATGCTGATCACTGCTATAATGCCCAGTGAAGCTTTTTTTTTTTAAAGGCATTTGCTTGCTTTGTAAGAACTAGCTGTTGACGGAAAAAACAAACAACCCACACAACATTGTATGCCGAGGGCCATATTTATGGGAAAAAAAAAATCTTCCCCTGAATCTGTCCTCAGATCTTTTTAAAAGTTCAAGTTGAGACGAGGTTTCCAAGCTGGCTCCAAAGGAGAACAATGCCCTCTGGGTGTGGGTGTGGGATTGGGTGCAGCTTGTCTTCCGGCAGCTTTTGAACAGGTGTCCAAAAAAAAGGCCAGTTTGAAATAAAGGCTCTTTTTGCCTCAAAGAGAGCCATGCCTAGGTCAGAAATGTCCAGAGGTGTCTTTGAAGGAAACAGACAAACAAACGAACAAACCAGCTTTTCTGCTCCCTGGTGTCTGGACGGGAGCAGAGCCGGTATTTTCCCATTGCCTTGGCACTTTCTCCCACAGGTGTTTCTGGAAGCGCCAAGATCAAATTACTAAGCCATTTTCTGCCTCACAATTACTTAGTTGAGTTTTTAACTTGTAAAACTTTCTTCTTTCAAAGTCTAGTGTTACATTTATTTTCCCTCTCCGCCCTCGCCCCACAGGGGTGAGAATCAAGGTGTCATTAGCCATCCCCAGAAAGGGAGCCAAGGGTGCCTCTGAGATGTTGTAGCCAGGAAGTATTTTTAGAAATTG TCONS_00070222 TCONS_00070223 s 3' 50119 TCONS_00070222 TCONS_00070223 s 3' 47619 EMBV3_24767 GAACCACCACGTGTGCCCCGTGGAGAACTGGTCTTCTTCATCCACGAGAGCTCTCAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14639 ACACCTCTCTGGAGGGATCTGGTTGGGGAGGAAGCGGAGGTGTCGCTGGCCCTGGCCTGT Gene BVT0102_398176 + 1 EMBV3_34588 GK000015.2:39730869-39778549 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059066 TCONS_00059065 TCONS_00059068 TCONS_00059063 TCONS_00059064 TCONS_00059067 1 XLOC_036254 Coding TCONS_00059063 XLOC_036254 Coding Coding BTBD10 15:39747983-39841396 j TSS44378 4310 1 TCONS_00059063_4 475 10 0.953967370359269 0.00196881409251222 0.00186320476394778 0.00253947739048384 0.00280430635333019 0.00420972238271939 0.00191179474993422 0.00209125626785062 0.00172162353456041 0.00164278564109742 7.79561498180363e-05 4.40463235699e-06 0.000210681990104383 0.00052396992077225 2.27727845380391e-26 0.000135319412113851 0.000304600360049805 1.33168466983695e-151 1.03093879070901e-70 0.000669713940561015 0.00136571945930756 0.000994891760199625 0.000913526591155448 1.9552983888627e-32 5.99048713900467e-40 0.00162710370370823 0.000683661692598672 0.000207881414232291 6.06428064312339e-05 3.64432184897342e-72 9.45039952045265e-19 XM_005215917.1 BTBD10 PREDICTED: Bos taurus BTB (POZ) domain containing 10 (BTBD10), 0.0 4616 100.00 0.593503480278422 NM_032320.5 BTBD10 Homo sapiens BTB (POZ) domain containing 10 (BTBD10), mRNA. 0.0 3276 91.84 0.531090487238979 TCONS_00059063_4 sp|Q9BSF8|BTBDA_HUMAN BTBDA_HUMAN BTB/POZ domain-containing protein 10; 0.0 857 97.68 0.997894736842105 0 coding 0 0 0 0 0.0718930238972242 0.666725633360776 0.0482371327986232 0.527618977797666 CTTTTCCTGAACTCAGACCGGTTAATAACCGCCAGCTGAGCCGGCAAAGGCGTTCGGAGTTCACCCCCTTGAGGAAAACGCTTTCCTTGAGTAAACTCAGAGTCCTTAGGTATTTCTCCAACTCTGGGATGTCCGCTTTTTTCTAACGGTAACAAGAAATCAAGGGAAAATGTGGTATTAAAAGATTTGGAGGTGACAGCTCGCAGCCACTCAGGCTCGAGGATCGCAGTAGATTCTGAGCTGACGTCTGTGGACACAAGCGCTTCCCATTTTGTTGCACCAGCCCCCAGGCTGAGCGCCCACCCACCCCAGGCTGCCACTCCCTCAACCGCGGGCACCCTCTGCGCCCCGCCCAACTACTGGGCGGTGAGGCTCCATTCTCGCGACGACTCAGCTAATCTCGCCTATTCCATCTGAGGGATCTCGCGAGAAGCAGCCTGGAGCCGGCCTGTAACCTGCTGGGGCGGCTTTAGTAGCCGCAGCCGCTCGAGCGGCCGCAGCCACAGACACCTCTCTGGAGGGATCTGGTTGGGGAGGAAGCGGAGGTGTCGCTGGCCCTGGCCTGTGCCTGGACACTCAAAGGGGACTACAGATGAAGATGGAATCCCAAAGAACATCCAAGATTTAATGAGGTTGAAGAATTGGGGTGATGGCACAAGACTACTCAGGTTGTGGGTCTACATGTGTGCTTTCAGAGCAGTAGTGTGAGGAAGCTTGCAGTGGGATGGCAGGACGGCCTCATCCCTATGACAGTAACTCCAGTGATCCAGAGAACTGGGATCGGAAATTGCATAGTAGACCTCGTAAACTTTATAAACATTCAAGCACTCCCTCACGTGTTGCTAAAGGAGCTGTCGACCACACCAAAATGAGTCTACATGGTGCTAGTGGGGGACATGAGAGATCAAGAGATAGACGAAGGTCAAGTGACAGATCACGAGACTCATCCCATGAAAGAACAGAATCACAGCTCACTCCTTGTATTAGAAATGTTACTTCTCCAACACGGCAGCACCATATTGAACGTGAAAAAGATCACAGTTCCTCTCGTCCAAGCAGTCCTCGTCCCCAGAAAGCGTCTCCAGATGGATCCAGTAGCAGTGCTGGGAACAGCAGCAGAAACAGTAGTCAATCAAGTTCAGATAGTAGCTGTAAGACGTCTGGGGAAATGGTATTTGTGTATGAAAATGCAAAAGAAGGAGCTCGGAATGTAAGAACATCAGAACGAGTGACACTTATAGTGGATAACACTAGATTTGTTGTAGACCCATCCATTTTTACTGCACAGCCAAATACAATGTTGGGCAGGATGTTTGGATCTGGCAGAGAACATAACTTTACACGTCCTAATGAGAAGGGAGAGTATGAGGTGGCAGAAGGAATTGGCTCTACAGTATTTCGAGCAATTCTGGATTATTATAAAACAGGAATAATCCGTTGTCCTGATGGCATATCTATTCCTGAATTGAGAGAAGCTTGTGACTATCTTTGTATCTCTTTCGAATATAGTACTATTAAATGTCGAGATCTCAGTGCCCTAATGCATGAGTTGTCAAATGATGGTGCCCGCAGACAGTTCGAGTTTTACTTGGAAGAAATGATCCTGCCTCTCATGGTAGCCAGTGCCCAGAGTGGGGAGCGCGAGTGCCACATAGTGGTGCTTACGGACGACGACGTTGTTGATTGGGATGAAGAGTACCCACCACAGATGGGAGAAGAGTATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTACATTGAAAACAGAGATGTGGCCAAATCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGACTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGGGGCCGCCCCGAAGTGATTTACAACTATGTCCAAAGACCCTTTATTCGAATGTCTTGGGAGAAGGAAGAAGGAAAGAGCCGGCATGTAGACTTTCAGTGTGTGAAGAGTAAATCTATCACCAACCTTGCCGCCGCTGCCGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCGACTCCGCAAGTGGATGAGCTGGATATTCTACCCATCCATCCCCCTTCTGGCAACAATGACCTCGATCCTGACGCACAGAATCCGATGCTGTGACGGTGATGTTTCTTGAAACCATAGCATGCTACTCTTCACAGTGACGCTGTACTCTCCTCATCCTGCACTGCAAGGCCACTCTCTTCATTGTGAGATGCACAGAACGATGTTTAGGATATTGCAGTGTAGGCTTTTTTTAAAGACCAAAGGTAGCTGAATGGTTTTTTAAATGAGTACAACTCTAGCATCTTGAGGTTCCAGTTATATAAATGTATTTGTTTACCAGTAGGTTTGTGAAATTGGTTCTTTGTATGGGGGACAGTCCTTTTTCACACATCTAGATCTTCCCAGAAGTGGTGGAAATTGGCAGCTGGGGTACTTTGTCTAGATTGATATTCATCACACCCCAGATAAAATGTAGAACATTATATATAGTTGCACTTTATAAATGGTGGTTAAGTGGAACTGTTCAAGCCATTTTTATAGTTGTGATGCACAATATAATTTAAATAAGTGCTTCTATCAAAGTATTCCTTCAGTAAAATGTATATAGTTTGCTGCCCATGATGAGCAAAAATGAGTATCACTGGGCTTATTTGAATGATGAGGATGAGATTCAACCATATCTTATCAGTTATCTCAGTGCCGTTTTCATCCTTTTCAAGTGTCACATGCAGGGAGTGTGAACATCAGAGGTGGGTTATTATCCGGTCTGCCTTACCCTTAATCTGTTCACAGATATTTATTTACTAATGATTTTTTTGAAAGTTATGGGATAGGAAAATGAAGTGTTTGCTCTTCATTTACTAAATGATTGTAAACTCGTTTTTCATCAAAATAAAATTCCATTGTTTTAATGTTTCTGATCTTTATAACCATCTTGACCAGATTTTGAGTCTTGTATTTTGCAGATTTCCTGTTTTATTGGTGTCAGTATAATTAGAAACCAGGAAGTAGCTCAAGGAACTCCTGTTTGATATATGTGTGATGAGGCACTTATATTCTCCACTAACTATAAAATACACTATAAATCCAAATCATTAGAGCTGAAAAGGGAATATTTTGTAGTACAACCTGATACGAAGATAAAATACTTTTACTAGGTTCTATAGTAACCTTAAGTTTCAGAGCCAAATTCTGATACTAGTTCAGTGCTTTCTTCACTATAGTATGCTGTTCTGCCAAGCAAATTGTTCATGCATATGTTTTTGTTTTGTTTCTTAATATTTTGTGACTCAGTTCAAGAAGAAATCAGAAGTATTTAGATGCTTTCAGTCTGGGGTCACTTAATGTCTGAAGCCATACAACTGGTAGTAGAGAGGAGTTGTATTAGAGAAGCCAGTTTGTTCTGTCTAATCTTGAGTTTGTAATTTCAGAGGACTTGAATGAAGTTTGTGTTTAAGCAGTAATATCTTTGTTCTCACAGAAACTAAAATTACAGTACAGCTAAACACGTGACACAGGAAAATTATGTATGTCCTAGAATTTTTATGAAGACCAGAAAGGCACTGTAAATGTTTTTGGTGTGGATCGTCCATAAACACCCACCATGGAAAATCAATGATCTAGCCCTATAGCATTTTTTCCTTAATTATTTGAAATTTGAACAATATTTATAGAACAAGGGAAACATTTATTAAAAATATTTAACTAATACATTATACTTTAACCCATATTTATAGTAAAGGATTCTTACAAGGAAGAATAAACAGTTTTATGATACAATTAGTATAAGAAATATCCACATGGGGAACTTCTTTGTAGTGTAAAAACACCATACATCTGAAATGACCATTTGCATATAAAAGCTACCAATGATGCTTCTGTGCACAATGATTAAAAAATTCAACACAAACAGAATCCAAAATATACAATTAATGCAAGCTATCCACAGCTAGCCCAATAATCAATGATGAGGAAACACTGGAGCAGGCTTTAGTTCCACTTTTTCTGAAGTTACACATTGTTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGACAGTACATAAAAGCTGTTCTCTCCTTATCCAGTAAGCTTCACAGACTGTATAACTCCATCAGTAATGCACTTTGATACTGTAGCTGTCGCCAAAGCAACATATAGTGTTTACAGCGGCCATGGCAAGTCGCTAAAGTCAACAGGGCCACCAAGCCCAGCATCCGCTTCCAAGAGGCTCATTATGACAGCCATTGCTGCTTCATCAT EMBV3_15219 CAACTGGCCCACAGACCCACTTCTTTGACAGCTGAGTTGATTTCTTTCTAGCACATGTTC Gene BVV0102_016762 + 0 NULL GK000022.2:21295367-21327747 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128316 TCONS_00128317 TCONS_00128315 1 XLOC_077861 Coding TCONS_00128317 XLOC_077861 Coding Coding ARL8B 22:21325458-21374181 = TSS95755 3353 1 TCONS_00128317_1 246 0.0253504324485535 7 0.93132465826526 0.00490200621320585 0.0041096126843651 0.00440745710582702 0.00119605327672378 0.000491930107850176 0.000221541846636333 0.000522709842877538 0.00259278548414633 0.00137565700143343 2.93872782848472e-08 4.5711740367878e-05 4.29729861312876e-05 4.66331240231718e-05 6.52455693138571e-09 2.16507357832217e-05 9.45108521466078e-06 0.000356611957613906 5.85946950700431e-08 0.00233542946066191 0.00450177349132292 0.000890130717260231 5.59469526902408e-08 0.00170358775273339 0.00220542102395974 0.00365512596483803 0.00247616137530093 0.00345534790513691 0.00031551033465823 0.000203856894441284 0.000500087767737125 NM_001046071.2 ARL8B Bos taurus ADP-ribosylation factor-like 8B (ARL8B), mRNA. 0.0 1660 99.78 0.275574112734864 NM_018184.2 ARL8B Homo sapiens ADP-ribosylation factor-like 8B (ARL8B), mRNA. 0.0 3741 88.03 0.891142260662094 TCONS_00128317_1 sp|Q9NVJ2|ARL8B_HUMAN ARL8B_HUMAN ADP-ribosylation factor-like protein 8B; 2e-136 386 100.00 0.752032520325203 6 coding 0 1 0 0 -0.14361960230402 0.797716563318719 -0.00631168648372857 0.913158233522957 ACGCTGGTGCACGGTGCTGCACGGAGGCTCCACCAGGTGGCGCTGCAGGCGGCGGGCGCGCCTGGCCGGACGGGCCTTGCCGCTCTTGCCGTGGGCGCCGGCGGCGGCGCGGGGACGAGCGTGGGGGGTAGGGCGAGTCATATGACCGGCTCGGCTTCCTGGCTCCGGCCGCCGTCGCCCGCCAGTGTCCGCCTGTGTCGCGCCGGGGCCCCGAGGAGCCGTTGGCGGGGTCCGGGCCGAGGCCCGCTCGTGTGCAGGTCGTCGCCGCCGCCGCTGCCCGCCCGCTCGCCCGTCCGTCTGTCCTCCCTCCCGGCCGCCATCATGCTGGCGCTCATCTCCCGCCTGCTGGACTGGTTCCGCTCGCTCTTCTGGAAGGAGGAGATGGAGCTGACGCTCGTGGGGCTGCAGTACTCGGGCAAGACCACCTTCGTCAATGTCATCGCGTCAGGTCAGTTCAGTGAAGATATGATACCTACAGTGGGCTTCAACATGAGAAAAGTAACTAAAGGTAACGTCACAATAAAGATTTGGGACATAGGAGGACAACCCCGCTTCCGGAGCATGTGGGAACGGTACTGCAGAGGAGTCAATGCTATTGTTTACATGATAGATGCTGCAGATCGTGAAAAGATAGAAGCCTCTCGAAATGAACTACATAATCTTCTAGATAAACCACAGTTACAAGGAATTCCAGTGCTAGTACTTGGAAACAAGAGAGATCTTCCTAATGCCTTGGATGAGAAACAGCTCATTGAAAAAATGAATCTGTCTGCTATTCAGGATAGAGAAATTTGCTGCTATTCAATTTCTTGCAAAGAAAAGGATAATATAGATATCACACTTCAGTGGCTTATTCAACATTCAAAATCTAGAAGAAGCTGAAGCATCTCCTGAAGTCTTCCAGTCCTTCCTGGCTCTAATCCTAGAATTATTGTCCGTTCCTCTGAAGTACTTCCCAGAATACGGTCCTTCCTAATCCCAAGAAATTGCCTTTTTCAGAGTTTATTTCTCATGTGCACTGCTGAAGATGTGTATCCCTAATCCATCATAAAGAATCAGCTAGAGTTGTCATGATAAAGTCAACACACACAAAAAGACTTCCTATACATACTTGTCTTTAACAGTGTGTAGAGCTTTTTTTTTTTAAACAAAACAAAACACACTTTTGACCATCTTAAATCAAGAAAAATTGCATACTTCTGTTCTGGTCTTTCTGGGCCAGGTTTTTCTATTGGTTTTCGGTAAATGTCTATCTATGATATTTCATTATAGAGTCCAGTAGCTTAATACTGATACTGACTTGATACAGCATGACGTTTCTAGTGCCACACACAGTATTTAGCAAACCTTTAGCCTGACTCCTGTGGGATAGAAACATGATGTTTATATATCTCACAAATGCATGTGAAATGTATAATTACACCTTAGGAATTTAAAAAAATGGTCTGCAAAGAGTGAGCAGAGGCACCAGATGAATGTTGTTATTGGTTCTTTACACTGGGAAGATCTTAGGCAATGAATTTTAAACACATTCTCTCTGTGAGAATTCTTCATCTCCAGAAGGCAGTTGGGGGTACGGGAGGAACTGAGGCATGCTGTTTTGTATCTGTCCAGATCATTACTTCTATATTTTTTCTCCTTTTTTTTTTTCCTGGTTCAACACACTTTTTTAAGGGGTTGGGAATTGAAGATTTTCTCAAAAGCTTTCATGAATTTAGAGCATTCCAGCCAATATAATAAAACGTGTTAAGAATGTCAGACTGTTCACACACCTGTTTGTTCTTTCTCTGTCCAGTTATTAAACCAGTGTTGCTGCATGACACTCTAATTCTTGACTTTTTATATCCAGTCGTAAAGTTGACTTTCAGCACAATAGATACTTAGAGACAAATAAAAAGTCTTATTTTTCTCTCTTACCAATACAAGCTTTGGCACTGTTTTGTCTGGTGCCATTGGACATCCTGATTATTGTGACAACTCTAGACCTGCCTGCTTTCTCTGATGTAATCATGCCCAGTGTCCGCAGGTTGTTGAATAATCACACAGAGAGTGGAGGAACCAATGCTGTCTATTGTTTGCTTCTATGCTACGGAGATGTGTACAGACTTCCATGAACATGTTTTGTAGCTTAGTTATCTTCATACACATAAAGGGACATATGAAAACTGGATCACTTGTAAATCGTTACTTACATAGCCCACTGTAGTAGCTAAAAGTCTGTGGTACACCTGCTTATGTGTTGCCTCACACTGTGTGTGATTTTGTTTCCTTTGTTAAGCAGCACTCATGTAGACAGTGCATTTCCAAACGTGTTGAGCACTCAAAAGTGCAGTCAACCGTAAGTTCTTTTAATGATACCAGTTTTAATTTATAGACTGCCATGGCCTTAAAAATATTCTGTACAAAATACTGCACCGTGTTGCACAGACACTACTTGCTTTCCTCCACTCACATTTTTATGAGTAGAACCTCAGCTTTTAAAATTCTGTTCTTACTCTGATGCATGTTGCATACTTCCCTGATGGGATGGATGGTTCTGTAAACAAAGGGATATGTAAACTTGCTACTATGTATCAACACCATTAATGGTCACTGTGAACCATTACAAAGAATGTGGCAACTTGCTTGTGCCTGAAAGGAGGAACCAGAACTAGAATGTGTGACTTTGCGGGGACCGCATAGGTTCGTTTAATTGACCTACAGCTAAACCGTAATGTGTTTGTGTGTCTCTTCATTGCTTCCAGCGTTTCAAGACATCCAGACACTACTACCAACATTTTCCTGTGCACTAACTTCTGCATGTGAAACTTAACAGTTACTGAACTTTGTAAATACGTGAATTTTTTTAATTTAGGTGGATGCATTTTTTTTGTCTGTTTACTGCTCTTCTCAGCTTTATTCAATAAACTTGCATTTTGAGGGTTGTATTGACAGTTTGAACTTAAAATATGCATCATGGTGGAAGGTGCTGACACATTGGAAAGGGGTTGGAAAGATACCATGAACACAGTCTGTAGAACATGTGCTAGAAAGAAATCAACTCAGCTGTCAAAGAAGTGGGTCTGTGGGCCAGTTGAAATAAGCACTTAAATATTCACAGGACTGACATTGCGACTTGTGGGGTGGAGGCAATGATATTGCTTGTAATGGGCTTCCCTGATGGCTCAGAGGTACAGAATCCACTTCCAATGCGGAGACTTAGGTTTGATCCCTAAGTCGAGAAGATCTTGTGAACTGTCATAATACACCAAATTTAGGACTTTTTGAAAATAAGTGGCAAGAGCTAGTTAAGCATTTTGTAATCCAGTTTTTAAAATCATAACAAAACTATTAATAAACTGAAATTGCAAGNN EMBV3_36548 GACTCGCCTAGGTCACACTGTTTCATTCTTACCAAGGTATTAATATGTCATTAAACGGTG Gene GeneID:512723|DLAT:XM_002692991:156_cdna Constitutive 0 NULL GeneID:512723 15 GENE DLAT NULL dihydrolipoamide S-acetyltransferase EMBV3_27260 GAATATGATCAGTGGGTAGACTGTGAGTCCCCTGACCTCTATCCTGTAGGGTGGTGTCAA Gene GeneID:511415|MBTD1:XM_002695884:198_cdna Constitutive 0 NULL GeneID:511415 19 GENE MBTD1 NULL mbt domain containing 1 EMBV3_06319 GATCATGCGATTGGTGGCCGAGTGTAGCCGCTCCAGTGTTCATGCCAGTGGGCACGCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29187 CCCGCGAGCTGGCCGCGCTCTACTCCCCAGTGGCAGGGGCTCTCCTTGCTGACTTCCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12853 GATCTTGGAGAAGGCAAAAGATCTCAGGCACAAGAGAACGCAAAGCAGCCACTACCCTTG Gene GeneID:407196|HTR1F:XM_002684663:108_cdna Constitutive 0 NULL GeneID:407196 1 GENE HTR1F 5htr1e 5htr1f 5-hydroxytryptamine (serotonin) receptor 1F EMBV3_43251 CAACACGGGTGAAGGTTGGGGGTGTTGGTCAGAGAAGAATCCAGAAGAGGAATTTGCCAA Gene BVV0102_230452 + 0 NULL GK000027.2:18472634-18608975 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22602 CAGTTCCGCACAGAGAATAATGGAGGACAGATTGTAATGCAGATAATAGCAAGACGGGAG Variant GeneID:407240|USF2:NM_001001162:532_cdna 206^767 2 EMBV3_07844 GeneID:407240 18 GENE USF2 NULL upstream transcription factor 2, c-fos interacting EMBV3_02270 TAAGAAGGTAGTTCAGTAAGTGAAAGCCCATCCCCTACCAGTCCCCTCCTGCCCTGGAAA Gene BVV0102_167232 + 0 NULL GK000022.2:49630198-49660604 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25418 GCCAAATCTCACAGACCGCAGAAGTGACGGAGACGACATGTTGAGGATAAAGGACCAGGT Gene GeneID:504513|C3H1orf113:NM_001162534:56_cdna Constitutive 1 NULL GeneID:504513 3 GENE C3H1orf113 NULL chromosome 1 open reading frame 113 ortholog EMBV3_02736 ATCACTTTTCCTCGAAAGGGGCTTGGTAAGAGATGGGTGCCCAACACAGGATGGCTGTCC Gene BVT0102_241758 + 1 EMBV3_23538 GK000014.2:68140741-68148337 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39901 CAAGTTCAGCTTTGGAGGCCGATCTGGAAACAGTGTAGCAGCGTTGGTTTTCCAAAAAAC Gene GeneID:534925|METTL10:XR_084657:81_cdna Constitutive 0 NULL GeneID:534925 26 PSEUDO METTL10 NULL similar to methyltransferase like 10 EMBV3_41901 GTGCCCATTTTCAAGGATATCGTGGTTCCCAGCCTCAACGTGGCCAAGCTCCTCAAGTAA Gene GeneID:513138|EXOC3:NM_001075600:20_cdna Constitutive 0 NULL GeneID:513138 20 GENE EXOC3 NULL exocyst complex component 3 EMBV3_29996 ACTCAAAATTTCAGATGCCTAAATGGCTAAGCAGGTAATATGAATATGTGAAAAGGCAAG Gene GeneID:507054|IL33:NM_001075297:47_cdna Constitutive 2 NULL GeneID:507054 8 GENE IL33 MGC142386 interleukin 33 EMBV3_24928 CTCTTTCTCCTCTTCCTGCTCGGGTTATTGTTGTGGAAGTTGTTTGGGGGTCTCATGTGC Gene BVV0102_132859 + 0 NULL GK000008.2:98081194-98331863 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226386 TCONS_00226390 TCONS_00226379 TCONS_00226382 TCONS_00226387 TCONS_00226380 TCONS_00226385 TCONS_00226378 TCONS_00226389 TCONS_00226391 TCONS_00226388 TCONS_00226392 TCONS_00226384 TCONS_00226381 TCONS_00226383 1 XLOC_137987 Coding TCONS_00226391 XLOC_137987 Coding Coding ZNF462 8:98274149-98428612 j TSS169271 7709 1 TCONS_00226391_15 2447 13 0.950175447682925 0.00300250271707733 0.00275428655609431 0.00285797936986624 0.00136842447999644 0.00218657364461872 1.64541028180056e-18 0.000846749320725827 0.000796465973394169 0.00171682002102818 0.000383130625168162 6.56257431986159e-05 1.04370740707422e-50 0.00076692688640105 0.00146359117524867 0.000959108606245503 0.000227631161763698 8.17491956775085e-85 0.000375513746372862 2.15311980402901e-59 0.00226621061833611 0.000167777029811547 2.10965437373871e-17 0.000437933867939056 3.1956901948715e-24 0.00048191700834793 0.00315624999194787 0.0017146313842314 5.05613415151148e-17 5.25685841640301e-05 2.53400973001752e-11 XM_005210492.1 ZNF462 PREDICTED: Bos taurus zinc finger protein 462 (ZNF462), transcript 0.0 1.364e+04 100.00 0.980671941886107 NM_021224.4 ZNF462 Homo sapiens zinc finger protein 462 (ZNF462), mRNA. 0.0 1.052e+04 90.68 0.98261771954858 TCONS_00226391_15 sp|Q96JM2|ZN462_HUMAN ZN462_HUMAN Zinc finger protein 462; 0.0 3598 95.24 0.754801798120147 0 coding 0 0 0 0 -0.0630868028671315 0.652233634025893 0.0168924341845845 0.855591577732355 GGAGGGAGGGAGAGAGAGGGAGAGAGAGACGGATATCTCAGGTCATCTGCAGCTGCAGCGAGTCTGAGGAGCCGAGGAAGGCAGGGAAGATGGCGATCCTCCATTGCTGAGACCCGGCAGAAGCACATGAGACTCCCAAACAACTTCCACAACAATAACCCGAGCAGGAAGAGGAGAAAGAGAAAGAGGATAAGGAGGCGGTGGGGCTGGAGAACCCGAAACACCTCCCGGCGCCGGGACGCTTCTTCTGTTCCTAATGTGAGAGAGTAGACCCAGATGATGGAGGTGCTTCAGTGTGATGGCTGTGACTTCAGAGCCCCGTCTTATGAAGATCTCAAGGCGCACATCCAGGATGTCCACACGGCATTTCTGCAGCCGACAGACGTTGCTGAAGACAACGCGAATGAGTCACGATCTGGGTCCATGAATGCCAGTAACCAGACAGAGGTGGAGTTTTCATCTATAAAGGATGAATTTGCGATTGCAGAGGACTTAACAGGTCAAAATGCAGCCGCGTTGGGGACTGGAAGTTACTATGGCCATAGTCCAGGATATTACAGTCAGCATATTGCCCCTAATCCCAAACCAACAAACAAGTTTTTTCAATGCAAGTTTTGTGTACGCTACTTCAGGTCAAAAAACCTCCTCATTGAACACACTAGGAAGGTCCACGGAGCTCAAGCTGAAGGGAGTTCAGCCGGACCCCCTGTTCCAGGATCCTTAAATTATAATATCATGATGCATGAGGGATTTGGAAAGGTCTTCTCTTGCCAGTTTTGCACATACAAGTCACCAAGGAGGGCAAGAATAATTAAGCATCAGAAGATGTATCACAAAAACAATTTGAAGGAGACCACTGCTCCCCCCCCTGCCCCTGCTCCAATGCCAGACCCAGTGGTCCCACCCATGTCCCTGCAGGACCCCTGCAAGGAACTGCCAGCAGAGGTTGTGGAGCGCAGCATCTTAGAATCCATGGTCAAGCCACTGACCAAGTCTCGAGGCAACTTTTGCTGTGAGTGGTGCAGCTATCAGACCCCCCGCCGAGAACGCTGGTGTGACCACATGATGAAGAAGCACCGCAGCATGGTCAAGATCCTGTCCAGTCTCAGGCAGCAGCAAGAAGGGACAAATGTGCCTGAGGCGCAGAACAAGAACGACCTCAGCCCCACTTCTAACTCCACCTATCTGTCCATGAATGCTGCCAGCCGGGAGTTACCCAACACTAACGTCTCCAACTTCAGGGGCTCCATTGGCAACTCCATCATGAGACCCAATTCTTCTTCCACTTCCAAGTTTTCGCCCATGTCTTACCCTCAGATGAAGCCGAAGTCACCTCACAATTCTGGCCTCGTTAACTTGGCGGAGAGATCCCGTTACGGAATGCCCGACATGACCAATTCTGCTGACCTGGACACTAACAGCATGCTGAATGACTCTAGTTCTGATGAAGAGTTAAATGAAATAGACAGTGAAAATGGCTTAAATGCTATGGATCACCAGACAGTAGGCATGTCTGCAGAGCAGCTGATGGGCTCAGAGGGCAACAAATTATTGGAGACCAAGGGGATCCCGTTTAGAAGATTCATGAATAGGTTCCAGTGCCCCTTTTGTCCTTTCCTCACCATGCATCGACGTAGTATTTCCCGTCACATAGAAAACATCCACTTATCTGGAAAGACAGCCGTCTACAAATGTGATGAATGTCCGTTTACTTGCAAGAGCTCGTTAAAACTTGGGGCTCACAAACAGTGTCACACGGGTACCACATCAGATTGGGATGCTGTGAATTCCCAGAGTGAAGGCATTTCCTCCTCACTGAATGAAGGTGTCGTGTCTTATGAGAGCTCAAGCATCAATGGCAGGAAGTCGGGGGTCTTATTGGATCCCTTGCAGCAGCAACAGCCACCCCCGCCGCCGCCACCGCCACCACCACCACCTCCGTCACAGCCACAACCACCGCAGCTACAGTCGCCCCATCAGGTGCCACCCCAGCCCCAGCTGCCCCCGCCGCCTCCCCCGCCACCTGCGCAAGCCCCACCCCTGCACCCCTACAAGTGCACCATGTGTAATTACTCCACCACGACTCTGAAAGGGCTGCGAGTTCATCAGCAGCACAAACACTCTTTCTGCGACAACTTGCCAAAATTCGAGGGGCAGACCTCAAGCCTGCCATTGGACAGTGAGACAGACAGCCACCCCTCTTCCAGCAACACTGTGAAGAAAAGTCAGACCTCAATTCTTGGGTTGTCCTCCAAGAACAATTTTGTCGCCAAGGCCTCTAGGAAGCTCGCTAACGACTTTCCGCTCGACTTATCGCCCGTGAAGAAGAGGACCAGGATTGACGAGATAGCAAGCAACCTGCAGAGCAAAATAAACCAAACAAAACAGCAAGAAGATGCGGTGATCAACGTGGAAGATGACGAGGAGGAAGAGGAGGACAATGAAGTGGAGATTGAGGTGGAGCTGGACAGGGAGGAAGAGCCGCCGGAGCCCATCCTGGAGGTGCCCACGCCCTTCTCTGCCCAGCAGATCTGGGCGAGAGATGCCCCTGAGCCCCCGAAGGAGCCCAACTTCAGAACTGTTGCCCATGATTACAATGCCACCAATGGGGCTGAAATAGAGCTCACCCTTTCTGAAGATGAAGAGGATTATTATGGCTCCTCCACCAACATGAAAGATCACCAGGTTTCCAATACTACTCTGCTCAACACCCAGACTCCTATCTACGCAAGTGAGCACAATAATGAAAATACCGACTTTAGTGACTCGGGAAGGCTTTATTATTGCAAACACTGTGACTTTAACAACAAATCTGCCCGGAGTGTCAGCACCCACTACCAGCGCATGCACCCGTACATTAAGTTCAGCTTCAGGTACATCTTGGACCCCAACGATCACAGTGCAGTGTACCGGTGCCTGGAATGCTACATCGATTACACCAACTTTGAAGACCTGCAGCAGCATTACGGTGAACACCACCCAGAAGCCATGAATGTCCTCAACTTTGACCACTCGGACCTGATTTACCGGTGTCGGTTTTGTTCCTACACAAGCCCGAACGTCCGAAGCCTGATGCCACATTACCAAAGAATGCATCCCACCGTGAAGATTAACAATGCCATGATATTTTCGAGCTACGTGGTGGAGCAGCAGGAGGGGCTAGGCACAGAATCCCAGACGCTGCGAGAGATCCTGAATTCGGCTCCGAAGAACATGGCCACGTCCACTCCCATGGCCCGTGGTGGCGGTATGCCAGCTCCGTACCCCAAAAACACTCCTTCCAAGACCTTTCCTCCAGAATGTGAAAATCAGAAGGACCCCTCGGTCAACACCGTTGTCGTGTACGACTGTGACGTTTGCTCCTTCGCGAGCCCCAACATGCACTCTGTGTTGGTTCATTATCAGAAGAAACACCCAGAAGAAAAGGCTTCCTACTTTAGGATCCAGAAAACCATGCGAATGGTGTCTGTGGACAGGGGCTCCGCCCTTTCTCAGTTATCATTTGAGGTGGGTGCTCCAATGTCTCCCAAAATGTCCACCATGGGTTCCCCACCCCCCCCACAACCCCCGCCACCAGACCTCAGTACTGAGCTTTACTACTGCAAACACTGTTCCTACAGCAATCGGTCAGTTGTGGGAGTCCTTGTCCACTACCAGAAAAGACACCCAGAAATAAAGGTTACTGCCAAATATATCAGACAGGCTCCTCCCACAGCTGCAATGATGAGAGGGCCGGAGGGGCCCCATGGCTCCCCCCGGCCACCTGCCCCTATGCAACAGCTCAACCGGAGCAGCTCCGAGAGAGATGGCCCTCCCGTGGAGAATGAGATGTTTTTTTGCCAGCACTGTGATTATGGGAACCGGACGGTCAAAGGGGTCCTCATTCATTATCAGAAGAAGCACCGAGACTTCAAGGCCAATGCGGATGTGATCCGGCAGCACACAGCCACCATCCGAAGCCTCTGCGACCGCAACCAGAAGAAGCCTGCCAGCTGCATGCTGGTCTCCCCCTCGGGTGTGGAGCGGGACAAAACAAAATTGCGAGCGCTCAAGTGTAGGCAGTGCTCGTACACCTCCCCCTACTTTTATGCCCTGAGGAAGCATATCAAGAAAGACCACCCTGCCCTGAAGGCCACGGTCACGTCCATCATGCGATGGGCATTTCTAGATGGCTTGATAGAAGCTGGCTACCACTGCGAGTGGTGCATCTATTCCCACACAGAGCCAAGTGGTTTGCTCCTGCATTACCAAAGGAGGCACCCCGAGCATTACGTGGATTATACCTACATGGCCACCAAGCTCTGGGCGGGGCCAGATCCGTCCCCTCCCTCTCTCACTATGCCAGCTGAAGCCAAAACATACAGATGCAGAGACTGTGTTTTCGAAGCCCTCTCCATCTGGGACATCACCAATCACTACCAAGCATTCCACCCATGGGCCATGAACGGAGACGAGTCGGTGCTGCTGGATATCATCAAGGAGAAAGATGCCGTGGAGAATCCCATGTCTTCCTCTGAAGACCTGGTGGGCACTGTGAGTTGTGAAAACAGTATGCCTGGCCCGCTTGCCGAGCAGGAAGGCGAATGCCCTGAGGATGCCAGGCTTTCCCCTGAGAAGACCATCCAGCTTGCCTCAGTTAACCCCGCCATCTCCTCCACCCCATACCAGTGTACAGTGTGCCAGTCTGAATATAACAACCTGCACGGCCTTCTAACCCACTATGGGAAGAAGCACCCAGGCATGAAGGTGAAGGCTGCCGACTTTGCCCAGGACATCGATATCAACCCCGGCGCTGTCTACAAATGCAGGCACTGCCCTTATATCAACACCCGCATCCATGGGGTCCTGACCCACTACCAGAAGCGACATCCGTCCATCAAGGTGACCGCAGAGGACTTCGTGCACGACGTGGAGCAGTCCACCGACATAGCCCAGAACGACGTAGAGGAGACGAGCAGGATCTTCAAGCAAGGGTACGGCGCCTACCGCTGCAAACTGTGTCCCTACACACACGGCACTTTGGAGAAACTCAAAATCCACTATGAGAAGTACCACAACCAGCCGGAATTCGATGTCTTTTCCCAGTCGCCCCCGAAGCTGCCCATGTCCCTCGAGCCCGAGATAACCACTGAAGTGAGCCCCTCCCAGGTCTCGGTGACGGAGGACGAGGTGGGAGAGGAGCCTGTGTCCACGTCTCACTTCGCTACCTCGCACCTCGTGTCCCACACTGTGTTCCGGTGCCAGCTGTGCAAGTACTTCTGCTCCACGCGGAAGGGCATCGCCCGGCACTACCGCATCAAGCACAACAACGTCCGCGCCCAGCCCGAGGGCAAGAACAACCTCTTCAAGTGCGCCCTGTGTGCCTACACGAACCCCATCCGCAAAGGGCTGGCTGCCCACTACCAGAAGCGCCACGACATCGACGCCTACTACACCCATTGCCTGGCGGCCTCCAGAACCATCAGCGACAAGCCCAACAAGGTGATCATCCCGTCGCCGCCCAAGGATGACTCCCCGCCACTCAGCGAAGAGCTGCGGCGCGCCGTGGAGAAGAAGAAGTGCTCCCTGTGCGCCTTCCAGTCCTTCAGCAAGAAGGGCATCGTGTCCCATTACATGAAGCGCCACCCGGGGGTCTTTCCCAAGAAGCAGCACGCCAGCAAGCTAGGGGGCTACTTCACCGCGGTCTACGCTGACGAGCACGAGAAGCCGGTACTGATGGAAGATTCGGAAGAGAGAGGTGGCTTCGAGAAAGCCGAGGTAGAGGGAAACGAAGGGCAGGACATCGAGTGGCTCCCGTTCCGCTGCATCAAGTGCTTCAAGCTGTCCTTCAGCACGGCCGAGCTGCTGAGCATGCACTACACGGACCACCATAGCCGGGACCTCAAGAGGGACTTCGTCATCCTGGGCGGCGGCCCCCGGCTGCAGGGCTCCGCCTACCAGTGCAAGCACTGCGAGAGCAGACTGCAGAGCACCGCCGAGCTGACCTCGCACTTGAACATTCACAATGAGGAATTCCAGAAGCGTGCCAAACGTCAGGAGAGGAGGAAACAGCTTTTGAGCAAGCAGAAATATGCAGATGGTGCTTTTGCAGATTTCAAACAAGAGAGGCCTTTTGGTCACTTAGAAGAGGTGCCAAAGATCAAGGAGAGGAAGGTGGTGGGCTACAAGTGTAAATTCTGTGTGGAAGTGCATCCGACGCTCCGAGCCATCTGCAACCACCTCCGCAAGCACGTCCAGTATGGCAGTGTCCCCGCCGTGTCCGCCGCCGTGAAGGGGCTGCGTTCTCATGAGAGGAGCCATCTGGCCCTGGCCATGTTTACCCGCGAGGACAAGTACAGCTGCCAGTATTGCTCCTTTGTTTCTGCTTTCAGGCACAATTTGGATCGCCATATGCAAACCCACCACGGACACCATAAACCATTCCGATGCAAACTCTGCTCCTTCAAGTCCTCCTACAACAGCCGGCTGAAGACACACGTCCTCAAAGCCCATGCTGGTGAGCATGCCTACAAGTGTTCTTGGTGCTCCTTTTCCACCATGACAATCAGCCAGCTGAAGGAACACTCCCTCAAGGTCCACGGAAAAGCCCTGACCCTCCCCAGGCCACGGATTGTCAGTCTCCTCTCCTCGCATGCCCACCACTCCTCCCAAAAAGCCACCCCAGCCGAAGAAGTGGAAGATTCCAATGACTCATCCTACTCTGAGCCTCCAGATGTTCAGCAGCAGTTGAACCACTATCAGTCCGCTGCTCTGGCGAGAAACAACAGCCGTGTGAGCCCCGTGCCTCTTTCTGGGGCCGCGGGGGGCGCTGAGCAGAAAACGGAAGCCATTCTTCACTGCGAATTCTGTGAATTCTCCTCTGGCTATATCCAGAGCATCAGGCGCCATTACAGGGACAAGCATGGCGGGAAGAAGCTCTTCAAGTGCAAAGACTGCTCCTTTTACACAGGCTTTAAATCTGCTTTTACTATGCATGTGGAAGCCGGGCATTCGGCGGTCCCCGAGGAGGGCCCCAAAGATCTCCGCTGTCCTCTCTGCCTCTATCACACCAAATACAAACGCAACATGATCGACCACATTGTGCTGCACCGAGAAGAGCGGGTTGTCCCCATTGAAGTGTGCCGATCCAAACTGTCCAAATACTTGCAGGGAGTAGTTTTCCGCTGTGATAAGTGTACCTTCACCTGCTCCAGTGACGAGAGCCTCCAGCAACACATAGAAAAGCACAATGAACTGAAACCTTACAAATGCCAGCTCTGCTACTATGAGACCAAGCACACGGAAGAACTGGACAGCCACCTTCGGGATGAGCATAAGGTAAGCCGAAACTTTGAGCTGGTTGGACGGGTTAACTTGGATCAGCTGGAACAGATGAAGGAGAAGATGGAGAGCTCTAGCAGTGATGATGAAGACAAGGAAGAAGAAATGAACAGCAAGGCTGATGACAGAGATCTCTTGAGGTTTTCGGACCGTGGGGCTGCTATCAACACTGAGAAGCGTTTTCCGTGTGAATTTTGCGGACGGGCGTTTTCCCAGGGCTCTGAGTGGGAAAGGCACGTGCTGAGACACGGCATGGATGGGGGCCATCATGTGGAAAACCAGAATGTGGGGAAAGTGTGAACTATCTAGACAAAGATTCATTTTGTGTCCATATTTGTTTTTAATTGGCCTCATTTCAAATGTGCTAAACAGTTCCATACCTGGATTGG EMBV3_38923 ACATTAGTGTAGGAGACCAAAGTGGGAAGGGCTTTAGGGCACTGAGAAAGGCCCTGAGTG Gene GeneID:534282|RNF145:NM_001102168:25_cdna UTR3_Alt 2 NULL GeneID:534282 7 GENE RNF145 NULL ring finger protein 145 EMBV3_06062 CTAAACCAGATTGACGCCGAGGACCCAGAGGGCTTATGAACAGCTCAACGTGAAACATGA Variant GeneID:513908|IFT52:NM_001038101:1036_cdna 839^993 1 EMBV3_19265 GeneID:513908 13 GENE IFT52 MGC134194 intraflagellar transport 52 homolog (Chlamydomonas) EMBV3_35825 GGTTTCTAAGCAGGAGCCTTGTCTGTGGCTGTGAGTCAGCATTCCCTTGTCCAAAGCAGA Gene BVT0102_147625 + 0 NULL GK000013.2:3582528-3832285 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041772 TCONS_00041773 TCONS_00041779 TCONS_00041774 TCONS_00041777 TCONS_00041771 TCONS_00041781 TCONS_00041776 TCONS_00041780 1 XLOC_025536 Coding TCONS_00041776 XLOC_025536 Coding Coding C13H20orf94 13:3599984-3818951 = TSS31245 4865 1 TCONS_00041776_1 271 0.0774922918807811 10 0.977827607939132 9.6050688400309e-48 8.27536695710525e-05 8.7263503450867e-35 7.45754745424521e-30 0.000138548850341478 7.68869514545837e-06 1.71502997799201e-22 0.000215788678900437 5.72099925229987e-09 8.90420087786198e-05 5.42873199652588e-08 1.46653403732097e-06 6.87750688674404e-06 0.000119167859348547 1.47513551482619e-22 0.00016081752572761 0.000709055328083435 5.64803207026624e-05 0.000117559991452029 5.07815243944321e-06 4.13070828175374e-10 1.36164597578096e-18 0.000479937330746045 1.38048536522339e-06 0.000117319279217388 1.17868274162193e-21 2.48949449749881e-05 0.00014577800882857 2.18744255133758e-63 8.40291965386501e-05 XM_005214064.1 C13H20orf94 PREDICTED: Bos taurus chromosome 13 open reading frame, human C20orf94 (C13H20orf94), transcript variant X2, mRNA. 0.0 8621 100.00 0.982322713257965 NM_001009608.1 SLX4IP Homo sapiens SLX4 interacting protein (SLX4IP), mRNA. 0.0 1139 80.31 0.250154162384378 TCONS_00041776_1 sp|Q5VYV7|SLX4I_HUMAN SLX4I_HUMAN Protein SLX4IP; 5e-118 348 72.29 0.907749077490775 0 noncoding 0 1 1 1 0.0329893685508231 0.799163148414362 0.0992045664710421 0.118864607856017 GTTAATTTTACAAACAATATTCAAGGTACTTAAGGCCTTGCTGCTCCAGTTGTGAACTGTGTATCAACCGCTTGAACATCACCTGGGAGCTTGTTAGAAACGCCGCTGACTCAGAATCTGCCCTGAGAAGCACATCTTAAGTTCAGACAGCACTGACTGAGGGCACGGACTAAAGACAAAGACTTTCTCTTTACAACTTGTGCTTCTGAAACAATATATGGGGTTCTCAGCTTTGGTTCTCAGCTATGAAAAAATCACTTGGGGTGCTTAAAAAAACCAACAACCCAGACCAGTATCAGTAGACTCTGAGATCTGTGGATGGAATTTAAGGAAGTTAAGGATTGGAGCTCCTTGACCAGTGATTGAATCTCAGCCCTCGGCAGTGAAAGCAGAGTGTTCTAACTACTGGGCCTTCAGGGAATTCCTAGGTCTGTAATTATTCTGGAACCAGTAAACCATGGCATCAAAGAAATTTGCTGTTAAATGTGGGAACTTTGCTGTCCTGGTGGATCTTCATGTATTGCCGCAAGGCTCAAGCAAAGACACTAGCTGGTTTTCTGAACAGAAGAAAGAGGAAGTCTGTTTACTGTTAAAAGAAACCATTGATTCAAGAGTGAAGGAGTACTTACAAGTTCGTAAACAGCACAGGCCATCAGATACAGAATTCACAAGATCCAATCCCTTGTCCTTAAAAGGTTACGGCTTTAACATCACAGCCTACTTCCTAAAAAGAGGAATACGTCTCCGCTGCCTGAGGGGCTCACCAAGGACAGAACTGCAAGTGTTTCCCGACAGGTTTGTGGTCTGTGTAAGTCAGCTTGCATTCAGTCGTGATCTTTCGGCAAGTCAGAGTGAAGATTTGCAGCCAGGAAGAGCTCTCCACAGAGCATCAGGGGATCGTACTGGGTGTGTGGAACAACTACTTCCTCCCGGGGCAGAGCCCAGGAGAAACGTTCTGCGAGAAATTGTGAACAGAACTGAGACTAAAAGCAGCACCATGAGTGGATCTCGGAGCAACAGGACCAGTGTGGGAGCATCCAGTCACTCGGTGGCTGCAGAGGGAGCATGGAGGAGGCGGGGGCTGCCAGCCTCATCCAGCCCCCCGGCCATGGGACAGGCGGAGGATGACAGGAAGGCATCTGAGACCCACCAGGGGCTTCCTGCTCTGAAGCTGGAGAAAGGTCATCAGGCCTGGCCAGGAGCAGCAGAAACCTCATCCCAGGGTGCGGTTGCAGACCGGGCTTCTAAGCAGGAGCCTTGTCTGTGGCTGTGAGTCAGCATTCCCTTGTCCAAAGCAGAGTCCTCGAGGGGCCAGAACACCGCAGAAATGCAGGAAGCGCAACCCTGCGGGAGATGCCGACCACCACAAGAGAGTTTCTCTTAGAAGTGATCGATTAGCCCCGAGGGAAATAATAGTGGGAAAAGCAAAGTTGCCAGGGTCCTGCCAACTTGAGAGCTGTCAGATCCGGGGTTACTTTTGAAACAAGATTTGGCAGAAACTGCATCTAATGAAGAGTTGCATGTTTTGGAAAACTCTCTCCTCCAGACATCTTATGAAAAATAAGCCAGGGCAGGCACAACTCAGCCACAAACACTGAAAGCTTAGCTCTGACTCAGGGCAGCCCAACCAAGAAAAGAAAAGGGTGGAAGCAGCTACTTGCTCACAGAAGAGGATTGCAACCCCGTCGTGGAGGATGTCGTGACCAGACCTGGGACAAATGAGCAGTGTGCCTAGAAGCCAGACTTACAGGAATTCAAATGATCATTTTCAGTAGAAGATATGTACCTGCATTGGGCTTAACTTTCAAATCAGCAGCCTCCGGGAGCTTGTTCTGACAACACCGCTCCTTTCTGGTTCACACTTTAACATCAGAAATTTACTTTAGTGCTAAAGAGCCATTAGCTTTGTCGGCAGTGACAGCATCCATAGAGGAAGCACATGAAGAAACCAGTGGTGTGCCTCGTCACATCCTTGCATGAAGCACAGTGACCGTGATGCTGTCTTTGCTGGCCAGTCCTCCTGCCCTGCAGCCTGAGTCGGGCAGCAGTGGTGAACAGGCTTACGGGTCACCCCATCTGCTTGCGGCCCCAGCGTCATATCTGAAAGTATGTGAGAAAGGCAGAGCCTGGGCCCCACCCAGACCTACAGAATGAGAAACTGGGTGATTCTGAAACCTGCTCAAGTTTGGCAACCCCCGGGCTAATTGCAGACCCCTTGGGATTGGTTTCCTGCAGCCTGACTGTCCTGGCCCCCAGCGCATCAGCAGGGCCCATGTGTGGACATGCAGCCGTCACGACCCCTCAGACTTACGAAGCACCTGGCTCAGGGTGTGAAGCACTGTTCCCAGGTCCTTAAGCATGGTGGCCACAGCACCCCGGGAGCTGTGACTGCGCTAAGAGTTGCAGGACATTTACATATAGTTTGGCCTGACATTTGGGGGAGACGTCAGAGAGGCTTGTTCTTTCTTGTAGTTCAGGCATGTCCCTACCCCTTGCCCCTGCCCCCACCTTTAAGACTCTGGTGAAGTTCAGAACAGATCCAAGCCCAAGAGGAATTCAGTGGGCAGAGTTTGCAGTTCCCCACTTGGAAGGCTGACTTGGAAATCTAAGGGCCACTTAGATTTCACACCAGGAGACTTCCATTTGCAGGATCACCCACTGTTGTCTCCAATGGGCTTGCTGAAATGTCATGTAGTGAATCATAGCAATGACTTATTTTGGATGGACAACTACAGTAGATTTTCTTAACCAAGTTTTATTCTGAAATAAGGAAGGAAACTATATTCAAAGGCCACCCATCAAATGTGTCTTTTTTTCCTGCTCAACATTGGGTGGTCCTTTGAAGTAATACCTCCTCCCTGGTAACACGGAAAATCAAGATATTCCCCAAAGTGTAGGAGTTAGCAAAAAAAAAGAAAAAACAGAAAAAGCCCAACAAAATGAAAGAATATGGAAATGGACACAGTGTAAGTTCATTCTTAAGATTAGTGGTTTCTCCCAGCTCATTCTGTCCATCCCCCACTCGCCTTTCCTTAGATTGTAGGGCAGGACTCATGAAGAGGCAGCCGAATTTCATGGCACTATTTTGGGTCGTGAAGCTAAGTCTTCCTTGCCATGCCTGGCTGTGGATGCAGGCCTTCTTCTTTGATGCTCCAGACTCTTCTGGAGACTTACTTCTTCCCTTCCTGGGAACCCCAGCCTCACCATCCCCACCAGAAACGTAGCCCTGCCTACTGACGTCTCTTCCTCTTCCCTCCTAGCTCTTAATCTTCCCCCAGGTGCCTCCGTTCACTGGGCTCCACAGTAGAAGAGGTAGCCCAGCAGAATACCAACCACAGTGGAGTGGAGTCCACTCCTCCAGGAAGTGCAGACTGCCCAGGGCAGAACCCTCCTGAGGAGGTGATAGAACATGGTCTGTCCTGAGCCCCCTCTCAGAGTCACCCATTTTCTGGGTGTGCTTGTCACTGAAGTGTTGTTGAGTCTTAAACAGAAACAGTTGTTGCAGTAGTTTAAGCAGAGAGGGCACAAAATAACAACCCAGGTGATAGGCCAAGAAACAGTGAGCTCCCTGGAAGAGTCTGGAATAAGGAAGAGCCATCCCAATAGCTGCTGCCTGCCCCAGAACTAGGGGGAGCTGTTTGAACTAGAGGCACCAGAGAAAGTTTTTATCAGGTTTTTATTTCATTAGTTAATCTGGGCCTGGTGGTTAAAGCCAGTACTTGTATGTTTAATGATTATCTTTCAAGAAAATTCTTGGCTTTAGAGTTTGGTGTATTTGTGGATATAATGATGACTGAGTTTCAGACTTCCCATCTCCCAGTGCAGAGCACATGGTTCAGTCCCTGGTCGGGGAACTAAGATCCCACATGATGAGGGGCAACTAGAGAAGGCCGTGTGCCGCAGCTAGAGAAAAGCCTGTGCAATGCAGTGAAAAGCCAGTGCAGCCGAAATTTAAAAACAGAAAAGTTGTTTAACAGCTGTGTCATTGCACAGCTGTAGATCAGTAGGGTCTTTCTCACAGCCTTCATGTACATGGGTTTTAACAGTATTAGCAAAGGGACCAACTTTCTGCTTCTGCACAGGGGCATGTGTTTGAGGAATTTCGCCTTTAAGCATTTTCCTTCCACATGTCTGAAACACCCCTGGTTCTCTTGTTTCTTGAGTGGTTGTTTGATTCTTTGGATATTTGGAAGTTCAGAGGGGAAAATGGATGCCAGGTTTTTTGTTGCTTATTAGGTGGGAAATGAAGAATTGGTTCTCTATTGCTGGAAGTGGGTGTGTTTTGATATTCTTGATAATCTTAGTAATTCATCTACAAATCTGAGACTCTGTCAGTATTCTTGGTTAAAAAGAATAAGTTCTTCAGCCACTCACTTAATAACCCAAATTAAATGTATATTCAAGTTCCTGTAACTCTGATGCTTGGAAGAAATATGGATACTATTGATTAATGTTATAACTTTGAACTCCTTAACTTTCTCAATGTCATGGCTTCTAATTCACCTCCATGTGCTTCCAAATGACTTTTTAATAGATTGTTTTTTTGTTTTTTTTTAATATCCATAAATGTCTGAGAACAGTCAGTGTGACTTTTCTTCCACATTTTTCTTTTCTTTGCCTCTGGAGGTTACCTGTCATCCAGCCGTGCATGTAAATTGTGAAATGCAAAGGAGCAAACATTTGGGCAGAGAGGAATAAATGTTGTAGCTTTTGTTCACTCATTTTAAATGAAGAAAGTAGGAAAATGTATTTCATTTAATAAAAAGCACGAGTCCCAAAAGCCCTCTGTAGTTTTATTTATGGAGAACATAGCTTCTCTCTAAAAAATGTTTCTCAAGATATATCTTGAAAACATCAATGGGATC EMBV3_16107 GGCCCAGGAGACACAGGCCCGCGTGTCCAAGGAGCGTGCCGAGGCCTGGCGCCAGAAGCT Variant GeneID:281004|APOE:NM_173991:26_cdna 399^725 2 EMBV3_19482 GeneID:281004 18 GENE APOE NULL apolipoprotein E EMBV3_05854 CAAGTGGAGGTGCGCCGGGGCCTGTGACTACACTATTTGGGATTGGAGATTTGCTGTTTA Gene GeneID:536103|NALCN:XM_002691980:71_cdna Constitutive 0 NULL GeneID:536103 12 GENE NALCN NULL sodium leak channel, non-selective EMBV3_13136 CAGATGCTGCTTGTGGATTTGTGACCACAGAGCTTTCTCTCTCTTGAACCCAAGTGCTCC Gene BVT0102_052755 + 1 EMBV3_08573 GK000005.2:64856204-64962167 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17011 TTTGGCCAGAACTTCCCAACCGTATTGATGCCGCCTATGAGCACCCTTCCCATGACCTTA Gene GeneID:281914|MMP13:NM_174389:2_cdna Constitutive 0 NULL GeneID:281914 15 GENE MMP13 NULL matrix metallopeptidase 13 (collagenase 3) EMBV3_08064 AGCTAAAAGTGGTGGAAAACTTTATTAATGAGAGCATGCGGTACCAGCCCGTTGTGGACC Gene GeneID:281740|CYP19A1:NM_174305:13_cdna UTR3_Alt 2 NULL GeneID:281740 10 GENE CYP19A1 CYP19P1 cytochrome P450, family 19, subfamily A, polypeptide 1 EMBV3_28096 ATCCAGTCCACCCTCAAATCCCAGATCAGAAAGATCCCTGACGGCTTCTCAAGATCCAGA Gene GeneID:510855|LOC510855:XM_002685161:152_cdna Constitutive 0 NULL GeneID:510855 1 GENE LOC510855 NULL similar to Pericentrin (Pericentrin B) (Kendrin) EMBV3_03660 CAGGAGCCCAGCTCTGGAGAAAGACTTGACTGAATCTCAGCTCCACTACTGACTAACTCA Gene BVT0102_405139 + 0 NULL GK000002.2:22767360-22832779 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108187 1 XLOC_064095 NonCoding TCONS_00108187 XLOC_064095 NonCoding NonCoding - 2:22785186-22786248 - TSS79808 1062 2 TCONS_00108187_1 41 0.300376647834275 1 0 0 0 0.000287553617159262 0 0 0 0 1.11388293543002e-05 0 0 0 6.73385589353088e-05 0 0.000186587769923817 7.39162508514393e-05 0 0 0 0 0 0 0 8.6384598783561e-05 0.000631437689352003 0 1.99024278661658e-05 0 0 0 0 NM_001244318.1 MAGT1 Bos taurus magnesium transporter 1 (MAGT1), mRNA. 5e-75 286 91.92 0.185499058380414 0 noncoding 0 0 0 0 GGTTAAGATGTGTGATTGTGAGCACAAAACGAGCTATGTGAGCAGGACTGTGCATCCATGAAAAAGAATGCTTTTGTACCAGGAACCCCTCTACCCAAACCTCTACCGAGTGGTGGAGTGAAGGCGAGTTTGTCCGAATTAGAAAAGCTAGGAGGCCCTCTGGGAAGCCCAGTCTTCCAGTAGAACCAAAGTGCTGAGCATCTCTGAAGAATGGTCCAGGCACCTTGCCTTACTTCCTGTCCTGCTCGTGTGGTCTGTGAAGCCTGTCATTGAATAGGGATGTTTATTGCATTTGTTTCTTTCCTTCCTTATTCTCTGCTCCCAACTCCAGGTAACAAGCTCATACTTTAGTTTCTGCGAGTACTTGATTGGATGTCTCCCCTTATTCTTTAACTCCCTTGGGCTTTTGGACATCTCACAGAAGCCAGTGCCAGGAGCCCAGCTCTGGAGAAAGACTTGACTGAATCTCAGCTCCACTACTGACTAACTCAATGAAGTGAAGTTGATCAGTCATGTCCGATTCTTTGCGACTCCATGGACTGTAGCCTACCAGGCTCCACCGTCGATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGAGAGCTTCCCGACCCAGGGATTGAACCCTGATCTCCCGGGTTGTAGGCAGACACTTTACCGTCTGAGCCACAAGACAAATAACTCAATGCTTTGAGGCAAATTGCTTAATCTCGCTACACTGCAGTTTCCAACACTATGACATGAAGGTAATAATAGTAATACCCACCTAACAAGACTGACTGGAGGATTCAGTGAAATGATTCATGTAGAGTTTATCTAGCCTTATCTGTCAGAACCATGAGCCCCCTTTCTCCTAAGCTACCCTGGATAACCCCTCTTTTACATCCTGTTACCTTGCCACCTTTACCATTAAGAAGGAGGTGACATGACATGTTTTCTTTGTGTACATAAAGGTGGATTGTTTCCTTAATATGCTAAGTTCTTGAAACATACATGTCTGTGTATATTCTGACATCAGTTCGATATATTTCACATAGCTTGTG TCONS_00101897 TCONS_00101898 . 5' 46325 TCONS_00101897 TCONS_00101898 . 5' 46325 EMBV3_40476 TGCCATTTATGTCAGACAGCACTACCAAGAGGAAGTGGTCAGCAGCTGTTTTTAAGCATA Gene GeneID:533484|DHX40:NM_001076897:33_cdna Constitutive 3 NULL GeneID:533484 19 GENE DHX40 MGC142364 DEAH (Asp-Glu-Ala-His) box polypeptide 40 EMBV3_26640 CCTACACGTGCTTGGGTTTGCTTCCAGAGCAACAGGAAGGAATGGAGATTTCTAGCTAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40086 GGCATTTGCACAGTTTATGCAGAACTTCAGTGAGTCTAATTTTCACAATTACACCTTGGT Variant GeneID:509328|CSGALNACT2:XM_002698829:69_cdna 879^980 3 EMBV3_32885 GeneID:509328 28 GENE CSGALNACT2 NULL chondroitin sulfate N-acetylgalactosaminyltransferase 2 EMBV3_29061 GTCTGACCTCTAGGGATGGCAACTCAGAAATCTGTCCACGGACTAATGGTTAGCGTGTGA Gene GeneID:618009|ASAP2:XM_002691530:564_cdna UTR3_Alt 2 NULL GeneID:618009 11 GENE ASAP2 DDEF2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 EMBV3_28137 GAGGACAAGCTGAACAATGCTAAATACGCCATTTCTGTTGCTCGAAAGATCGGTGCCCGG Gene GeneID:616560|PLS1:NM_001103299:78_cdna Constitutive 0 NULL GeneID:616560 1 GENE PLS1 MGC165674 Plastin-1 plastin 1 (I isoform) EMBV3_19124 AGTGCTATCTGCCCAGCCGCTCCTAGACCACCATTAAGTACTGTGAGACCAGCTTCTTCA Gene GeneID:100295927|LOC100295927:XM_002700114:272_cdna Constitutive 0 NULL GeneID:100295927 X GENE LOC100295927 NULL similar to poly(A) binding protein, cytoplasmic 1 EMBV3_11668 TCACTCCTCGGGAGGAGCAGACCAAAGAGGACTTAGGGCTCGATTGGAGGCAGAGTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08953 GCAAATCTATTGCATATAAAACAAAACAGAGATGCATTTTGAGGACTCAATCTCTTTGAG Gene GeneID:281437|QPCT:NM_177506:18_cdna Constitutive 0 NULL GeneID:281437 11 GENE QPCT MGC143060 glutaminyl-peptide cyclotransferase EMBV3_12614 TTGTATTACTTATATGCTAATTGAAATTAAGCTGGATCAGTTCACGTGAGAATTCGACGA Variant GeneID:518111|SLC30A6:NM_001075766:20_cdna 720^939 2 EMBV3_00964 GeneID:518111 11 GENE SLC30A6 MGC143281 solute carrier family 30 (zinc transporter), member 6 EMBV3_15121 TGAACGTGGCTCTGGTGGCGCTGGTGTTGCTAGGGATGCCTCCAGAGGACTGGCAACATT Variant GeneID:534021|PGRMC2:NM_001099060:38_cdna 200^446 2 EMBV3_06944 GeneID:534021 17 GENE PGRMC2 MGC139610 progesterone receptor membrane component 2 EMBV3_32836 CTCTGCCTCATTGCTTAGGATAAGGATCCCACCAAAGGGCTGGAGGTATCTATGACCCTC Gene BVV0102_099075 + 0 NULL GK000004.2:76725310-76869664 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184587 TCONS_00184585 TCONS_00184588 TCONS_00184586 1 XLOC_111383 NonCoding TCONS_00184588 XLOC_111383 NonCoding NonCoding - 4:76746655-76750209 - TSS137421 1436 2 TCONS_00184588_3 55 3 0.596678862932733 0.231634870396881 0.154327840239595 0.169017210605964 0.166548791490663 0.1812642412347 0.0577677079257185 0.129517684554848 0.164754161005457 0.158735870276361 0.0337373123862245 0.0075857578465588 0.00681306413335548 0.0432559801205249 0.051222163954688 0.0676143620700995 0.000919578444365292 0.000265849133935585 0.000330920102506314 0.113785520735813 0.157909935291325 0.0877681305154177 0.000747198245858969 0.00124565089323814 0.000624188355912191 0.203125012895291 0.155340760150342 0.156050584045936 0.00285382269532268 0.0018740826591428 0.00101513517523623 XR_035405.1 Gm6653 PREDICTED: Mus musculus predicted gene 6653 (Gm6653), misc_RNA. 9e-10 69.8 82.35 0.0466573816155989 0 noncoding 1 0 1 1 -2.39301461270114 0.0293704418911997 -0.844746403476175 0.000610404195139848 NNGAGTCTGCTCTAGCAATAGGCTTTATCTGTGTCCCTGAGAAGAGCCAGGTCTCCTAGGACTGGCCTGGAGGAGGGGCTGTGGAGGTGTGCAGGATGGTACTGAAAACATAAGCAATCTTTGTTTTTTAGAAGGCAGAAAATAAACATTTTTTTTAAGGTAAAGTGGGGCGTGAAAGCATTTGCAAAAATAAAACTAGCTCTATGTTGGTAACCACAATGTGTCCACTAACAGACAAGTCTCAGAGACATCTGGACCTGGGAGGCTAATGCGAGGTTTGTGTTGATCGAAGTGCCCCGGGCACCCTGCTTCGTTTTCCTTATAGCATGAGGGTCATAGATACCTCCAGCCCTTTGGTGGGATCCTTATCCTAAGCAATGAGGCAGAGAGCTCAGCTCTAGAAAAGGACAGGAGAAGGCCTCTGCTACTAGAGGGGGTTAAATTCCTCTCCCAACAACACTAAACAAACCAGTGCCCGCAAACTGTCAGAATATCTTCCAAATGAGAACCACTGCTCTGGTCTTTCCTGGAATGGTGTTCAAAGCCTGCTAGGTGTGAAGGCTTGTCCACCGAAGCCGGGTGGGTTGCTAGGCAGCCCACCTTAAACTTGGTCCTGTTCCCTACACTGTGTCATCCTAGTATCTCAGACTCACCTGGCTGTATCATCAGCCAGTTCCTCCCACCCCATCCAGAGGCACAATGGAGAGCAAGGTCAGACCCAGGGCAAGTCCTGAGGAAGGTCTACAGACATACAGATGGTTGGACGGACAGATGAGTAAGTCAGGCCATGGCAGGAGCTCCTGAGCACAGCTGCGTCCTGGGCCCAGGGCTGAGCACTCAGTCGTCCTCGATGGTGAGTTCGTGCTGGGTGGCCTCCTCGATGTTCTGAAGCAGGTGGATTTCCCACTGCCTCACTCGCTCTGTCTGTTAACAGAAAGGCATCTCTGAGGTCCACCTTGTAAGAACACTGATCTTTGCCAGAGACAAGCTGGGTAGGAAAAGCAGGTGCCCATCCAGGACTGCAAGGCCCTCACATAGGCCTGCTCTTGGGCACCATGCAGGACTGACAAGTGAAAGCCAGCCTGGCCAGCCTTTGCATGCCAGGCACTATGACCTCATGATGGAGCCAGTCAGACCCCAGGGGACTGAGCCCAGTGTGAGGACAAGCAGGTACGTGAGAGAATGGAGGGAGCTAGGACCCCAGGATCTGACAAGGGCAGAGAGGGGTTGCAGGGGAGGAGACAGGAACAAGGAGGGATCCGCCAGGCATGGGCAGAGAGTGTGAGGGCTGGGGTGGGCACTTGCAAATGAGTGTGTGAGGCTGTCTAGACAGGCCATTTTCCTGCTATGTCTTCTAGGGGCTCTTCTAGGGCAGCTGAGGGCAGGTAAAGGAGGAAGGGCCCCTAGGACAGTGGGATGGGGGTGGGATGACTCNN TCONS_00184584 s 5' 21347 TCONS_00184584 s 5' 21888 EMBV3_28665 TCAACAATGCTCACACCATCGGCTGCAATGCTGTCACGGAGGGCCAGCAGAACGACCAGT Variant GeneID:512530|SEC13:NM_001075565:110_cdna 522^995 3 EMBV3_41638 GeneID:512530 22 GENE SEC13 NULL SEC13 homolog (S. cerevisiae) EMBV3_19365 GATTCATCCAAGAGCTGGTCCTTCGCTTCAACTTTTTGTTGTGATGAGGCAGAACTGAGG Gene BVV0102_374721 + 0 NULL GK000002.2:77950463-78580377 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34459 CTCTGGATAGGAACTGGAGGAGGCCATATCTTACTCCTTGATCTTTCAACTCGTCGGATT Gene GeneID:535652|LRRK2:XM_002687366:59_cdna Constitutive 0 NULL GeneID:535652 5 GENE LRRK2 NULL leucine-rich repeat kinase 2 EMBV3_35886 CCATGCATTCCGCCCTGTGCTCCCTGCTTTGGCGCAAACGTAAGAAATATGGTTGAAATG Gene BVV0102_090443 + 1 EMBV3_14241 GK000018.2:17085941-17813466 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085644 1 XLOC_051922 Coding TCONS_00085644 XLOC_051922 Coding Coding CBLN1 18:17812582-17816071 = TSS63895 2076 1 TCONS_00085644_2 193 3 0.405676605504587 1.77599184725083e-10 9.68546290658994e-11 9.01071854252499e-11 1.06595728492708e-10 3.77383455187614e-11 2.76212692016738e-11 7.37563262862013e-11 6.51117210222523e-11 8.59800799718261e-06 0.000150590935539975 3.39885497422766e-05 6.55300018547019e-05 0.000282322038337248 0.000970924216164131 0.000261834070758561 0.000846018694075392 0.0041850982651449 3.97853981678752e-10 7.65119421532645e-11 9.35816600401602e-11 2.5578537111751e-11 3.17444597370997e-05 0.00103285532568661 0.000307169081243357 7.4345431290683e-11 6.17137335417791e-11 7.10690007393283e-11 0.000205891450124185 0.000265171600635565 0.000443310601750527 XM_005199995.1 LOC101909193 PREDICTED: Bos taurus cerebellin-1-like (LOC101909193), mRNA. 0.0 3696 100.00 0.986512524084778 NM_004352.3 CBLN1 Homo sapiens cerebellin 1 precursor (CBLN1), mRNA. 0.0 2219 83.90 0.986512524084778 TCONS_00085644_2 sp|P86437|CBLN1_BOVIN CBLN1_BOVIN Cerebellin-1; 2e-142 399 100.00 0.994818652849741 1 coding 0 0 0 0 -0.0544655463258714 0.693108252130717 -0.0127464996524713 0.839855330899048 ATGCTGGGCGTCGTGGAGCTGCTGCTGCTGGGGGCAGCATGGTTGGCGGGCCCGGCCCGCGGGCAGAACGAGACGGAGCCCATCGTGCTAGAAGGCAAGTGCCTGGTGGTTTGCGACTCCAATCCTACGTCCGATCCTACGGGCACAGCTCTGGGCATCTCTGTGCGCTCCGGCAGCGCCAAGGTGGCTTTCTCTGCCATCAGAAGCACCAACCACGAGCCGTCCGAGATGAGTAATCGCACCATGATCATCTACTTCGACCAGGTACTAGTGAACATCGGGAACAACTTTGATTCAGAACGCAGCACTTTCATCGCCCCGCGCAAAGGAATCTACAGTTTTAACTTCCACGTGGTAAAAGTCTACAACAGACAGACCATCCAGGTGAGCCTCATGTTAAACGGGTGGCCGGTGATTTCAGCCTTCGCTGGTGACCAGGACGTGACCCGGGAGGCCGCCAGCAACGGAGTTCTAATCCAGATGGAGAAAGGCGACCGAGCATACCTCAAGCTGGAGCGGGGAAACTTGATGGGGGGCTGGAAGTATTCGACCTTCTCCGGATTCCTCGTATTTCCCCTCTGACTGGCTCATCTCGGGAATGGAGGCAGGGAGAGGGCGAAGGCAGGAGGGGAAAATTATAAAGAGGCTGAACTTTAGAGGACGAGAAAGCGGCACGACTTGAAACTTCCTACTTGTTCCCCAGCTGTATCCGGTAAACGAAGCGCAGCCCGGCGGTTGGACAACTTAGTCCATTTCCTCTTTAGGAGAAGTAAATTCCGCTTAGCTCTGCGCACTCCCATTTCCAAAATAAACTCGCCCCCAACTCCAGTTGCAGTAATCAAGAAAGACAGACTGCCTTGTCACTGTTTCTTACCCCGTGTTCATGTTCCCTACAATTTATATAAAAGAAACTTTGCATTTCACTGTATAATGTGAAATATCTTCCTCCTCTGAGTCCCGCTCTTAATCTTTTCATCCGCTGAAATCTGATATGTCCCTCCCCCCCCCCCCTTTTTTTTTTATTTTGGAGAGGGGGGAAGGATTTTTTTTTTTTTTTTGGATGGGGAAGTAGTTTTAATTTGGCAAGTACTGCTCTTAAAACACCGCTCGAATTAATTAGCTGAAGGTACTTTGTATGTATCCTCGGCTGCTTGTTAGCAGAGAAAGGACTCACCTTAGTGGTGACTGGTTTAAAAAAAGAAATATATATATATATATAAATATATATCATTTGTACACGAAGAACTGTTCCCAGTGGAAACTGGCTGTATTTCCGTATTTCTATGTCCCATTTGGAGTGATCGTGAAATCTAAGGCTGCTTGATGTTCTGATGCTTGTCAATGCCCTAGTGTTCTGTGGCTCCACTAAACGCCAGGAGGTTCTTCGGGACGCTTCCTCGTCCTCTGTAACATACCTGTGAATAGCCAAGATTTAATTTTGCTTTAATCCAATAAAGTTCAAGTGGAACTTTTATTTTTCTGAAACAGCTTTCTAAACTACGCACCTCCCCTAGTTGCGAGGTCTGGGGGCAGGGGTGCGGAAGGGTGAGATTCAGAGGTGTAGGGGACTTGGCGGCGTGCAAGCCGAGAAAGGCTAAGGCAGTGTCGGCCCTCGCTCCTTCCTGCGCGGGCCTAGGGCCAACCATGCATTCCGCCCTGTGCTCCCTGCTTTGGCGCAAACGTAAGAAATATGGTTGAAATGTTGCTAGGCGAGGCCCGACAGCCGGCCTGGAAGCGAAAAAGGCTTTTCGCAGTCCAAGTGCATCAGGAATAATTCCAACTCGAGGAGCCAGAACCTTTCTGCCCTTTCGTCACGCTTCCCACGCCTCTGCCTCCGGACCGTCCGCTCACAGATTCCGAAGCTGCGTCTGTTTTATTCCGCCTCCTCTGAATCCCGAGTCTGCGCCGGCGGTATTACCGGGCGCCGGGGACTTGTGATCGCGCTCATCGCAGGACTTTTATTCAAGAGGTTCGTCCAGGAGTTTTGATTGTATCGGAACATAATGTGAAAGCAAAATTGAAATAAACGACTTCGTTTTAAGTCTGGAAGTCTGACCAAGTCGCTTCGGCAGAGGG EMBV3_02106 GCCCCACCTCCCTTCCCATCCCTCTGGATTTGTAACTATTTTGCACTTTTAACACCTGCC Gene GeneID:506745|FAM46B:NM_001045950:87_cdna Constitutive 0 NULL GeneID:506745 2 GENE FAM46B MGC137624 family with sequence similarity 46, member B EMBV3_29447 TCCTTTCCCTTCGTGGCCCTTTTGCCCACCCCTACGCTGATTTTATGTCTTCCATTTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10474 GTCTGTCTGCCACGAGGGTAAACAGCCGATACACTGACTACCATTCTGCACCCACATCTT Gene BVV0102_235858 + 1 EMBV3_26831 GK000028.2:26104501-26253843 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31197 GTTAACATGTCTTGAGGAGGCTGAGGAGTGGCTGCTGATGGCAAAGATACTGTGGGCTGA Gene GeneID:617079|LOC617079:NM_001098469:2_cdna Constitutive 0 NULL GeneID:617079 8 GENE LOC617079 NULL similar to ATP-binding cassette transporter C4 EMBV3_04591 GCCAGCCTCTGGCTCCAGCTCTCCATTGCGAGGTCCCACCCAGCCAGGACCCCCAAGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42951 TTCTGCCGACAGGACATCATCACCCTGCAGGACCCCACGAACTTGGACAAATTCAACGTT Variant GeneID:511467|PPIL2:NM_001038081:43_cdna 565^660 1 EMBV3_36107 GeneID:511467 17 GENE PPIL2 MGC134547 peptidylprolyl isomerase (cyclophilin)-like 2 EMBV3_19413 GAAGATGAAACTCAGAAAGAACTAGAAACATTACGTAATCAAGGTCAAGTAAGGGGAACC Variant GeneID:613773|PITPNB:NM_001078040:83_cdna 837^922 4 EMBV3_24382 GeneID:613773 17 GENE PITPNB MGC139835 phosphatidylinositol transfer protein, beta EMBV3_20921 GCCTTGCTGTTCAAACAGGGTGAGAATTAAAATGCGATAGGTTTAGGTAATTCCAGAAGC Gene BVT0102_097552 + 0 NULL GK000002.2:107169205-107173870 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106112 TCONS_00106113 TCONS_00106104 TCONS_00106111 TCONS_00106108 TCONS_00106114 TCONS_00106105 TCONS_00106116 TCONS_00106115 TCONS_00106107 TCONS_00106110 TCONS_00106109 TCONS_00106103 TCONS_00106106 1 XLOC_062722 Coding TCONS_00106116 XLOC_062722 Coding Coding USP37 2:107171722-107245866 = TSS78157 5705 1 TCONS_00106116_7 981 23 0.923364309510001 0.000920708098731667 0.000592809178694518 0.00083751743178445 0.00122509078123516 0.000421026640704202 0.000520194569828176 0.000658738134140659 1.55697580918051e-60 0.00191465891824595 0.00178969488494963 0.000298332909342481 8.39376240452812e-90 0.000447008682628332 0.00081796127894104 0.000531206347980086 1.39276013387938e-12 4.01640860163674e-89 0.000524123445675868 0.000763556767332934 0.0012529200969902 4.45960191039674e-34 6.27144689933342e-175 1.03415661538993e-22 1.91488541952643e-15 0.00134567112035016 0.00130528215259457 0.0011679658171417 0.000157096183981277 6.24679828490997e-97 0.0010441509389851 XM_005202809.1 USP37 PREDICTED: Bos taurus ubiquitin specific peptidase 37 (USP37), 0.0 1.029e+04 100.00 0.999824715162138 NM_020935.2 USP37 Homo sapiens ubiquitin specific peptidase 37 (USP37), mRNA. 0.0 5696 88.88 0.764592462751972 TCONS_00106116_7 sp|F1N5V1|UBP37_BOVIN UBP37_BOVIN Ubiquitin carboxyl-terminal hydrolase 37; 0.0 2024 100.00 0.998980632008155 3 coding 0 0 0 0 -0.309765232483545 0.0596446182766135 0.0415668446863039 0.51670201947929 ATGTCTCCTCTGAAGATACATGGCCCTATCAGAATTCGAAGTATGCAGACTGGGATTACAAAATGGAAAGAAGGATCCTTTGAAGTTGTGGAAAAAGAGAATAAAGTCAGCCTAGTAGTTCACTACAATACTGGAGGGATTCCAAGGATATTTCAGCTAAGTCATAACATTAAAAATGTGGTGCTTCGACCCAGTGGAGCAAAGCAAAGCCGCTTAATGTTAACTCTACAAGATAACAGCTTCTTGTCAATTGATAAAGTACCAAGTAAGGATGCAGAGGAAATGAGGTTGTTTCTAGATGCAGTCCATCAAAACAGGCTTAATGCAGCCATGAAACCTTCTCAGGGTTCTGGTAGTTTTGGAGCTATTCTGGGCAGCAGGACCTCACAGAAGGAAACCAACAGGCAGCTTTCTTATTCAGACAATCAGGTCTCTTCAAAAAGAGGAAGTTTGGAAACTAAAGATGATACTCCATTTCGAAAAGTTCTTGGTAATCCAAGTAGAGGATCGATTAAGGCTGCAGCAGGAAATGGAGTAACTCCTGCCCGGACAATTCCCTCTTTGACATCTACATCCACACCTCTTAGATCAGGGTTATTAGAAAATAGGACTGAAAAGAGAAAAAGAATGCTGTCATCTGGCTCAGAGTTGAATGAAGATTACCCTAAGGAAAATGATTCATCATCGAACAACAAGGCTATGACAGATCCCTCAAGAAAGTATTTAACCAGCAGTAGAGAGAAGCAACTGAGTTTGAAACAGTCAGAAGAGAATAGGACATCAGGGCTTCTACCTTTGCAGTCGTCATCTTTTTATGGTAGCAGAACTGCAGCCAAGGACTATTCTCCTGGCAGCACTAACTTAGACAGGACTAATATTTCAAGCCAAACTCCATCTGCCAAAAGAAGTTTGGGATTTCTTCCTCAGCCAGCTCCTCTTTCTGTTAAAAAACTGAGGTGTAACCAGGATTACACTGGCTGGAACAAGCCAAGAGTGCCCCTTTCCTCTCACCAACAGCAGCAACTGCAGGGCTTCTCCAATTTGGGAAATACCTGCTATATGAATGCTATTTTGCAATCTCTATTTTCACTCCAATCATTTGCAAATGACTTGCTCAAGCAAGGTATCCCATGGAAGAAAATTCCACTCAATGCACTTATCAGACGCTTTGCACACTTGCTTGTTAAAAAAGATATCTGTAATTCAGAGACCAAAAAAGACTTACTCAAGAAGGTTAAAAATGCCATTTCAGCTACAGCAGAGAGATTCTCTGGTTATATGCAGAATGATGCTCATGAATTTTTAAGTCAGTGCTTAGACCAGCTGAAAGAAGATATGGAAAAATTAAATAAAACTTGGAAGATTGAACCTGTTCCTGGAGAAGAAAATTCACCAGATATTTCAGCTACTAGAGTATACACTTGCCCTGTTATTACTAATTTGGAGTTTGAAGTTCAGCACTCCATCATCTGTAAAGTATGTGGAGAGATTATTCCCAAAAGAGAACAGTTTAATGACCTCTCTATTGACCTTCCTCGAAGGAAAAAGCCACTCCCTCCTCGTTCAATTCAAGATTCCCTTGATCTTTTCTTTAGAGCAGAAGAACTTGAGTATTCCTGTGAGAAATGTGGTGGGAAATGTGCTCTTGTCAGACACAAATTTAACAGGCTACCCAGAATCCTCATACTTCATTTGAAACGATACAGCTTCAATGTTGCTCTCTCACTTAACAACAAGATTGGGCAGCAAGTCATCATTCCAAGATACCTGACCCTCTCATCTCATTGCACTGAAAATACGAAACCACCCTTTAACCTTGGTTGGAGTGCACAGATGGCAGTTTCTAGACCATTGAAAGCCTCTCAAATGGTGAATTCCTGCATCACCAGCCCTTCTACACCTTCAAAGAATTTCACCTTCAAATCCAAGACCTCCTTGGCTTTATCCCTTGATTCAGACAGTGAAGATGAGCTTAAACGCTCTGTGGCCCTTAGCCATAGGCTTTGTGAAATGTCAGGCAGTGAACAGCAGCAGGAGGACCTGGAAAAGGATTCAAAATCATGCAGAATAGAACCTGATAAATCTGAATTGGAAAACTCTGGATTTGACGGAATGAGTGAAGAGGAGCTTCTAGCAGCTGTTTTAGAGATAAGTAAAAGAGAAGCTTCACCATCTCTCAGTCATGAAGATGATGATAAACCAACTAGCAGCCCTGATACTGGATTTGCAGAAGATGATATTCAAGAAATGCCTGAAAATCCAGACTCTGTGGAAACTGAGAAGCCGAAGACAATCACAGAGCCTGATCCTGCCAGTTTTACTGAGATAACTAAAGACTGTGATGAAAATAAAGAGAATAAAACTCCAGAAGGATCTCAAGGAGAGGTTGATTGGCTCCAGCAGTATGATATGGAGCGTGAGAGGGAGGAACAGGAGCTTCAGCAGGCATTGGCTCAGAGCCTCCAGGAGCAAGAGGCTTGGGAACAGAAAGAAGATGATGACCTCAAAAGAGCTACAGAGTTAAGTCTTCAAGAGTTTAACAACTCTTTTGTGGATTCATTGGGTTCTGATGAGGATTCTGGAAATGAAGATGTTTTAGATATGGAGTACACAGAAGCTGAAGCTGAGGAACTGAAAAGAAATGCTGAGACAGGAAATCTTCCTCATTCCTATCGGCTCATCAGTGTTGTCAGTCACATTGGTAGCACTTCGTCTTCAGGTCACTACATTAGTGATGTGTACGACATTAAGAAGCAGGCATGGTTTACATATAATGACCTAGAGGTATCTAAAATCCAAGAGGCTTCTGTGCAGAGTGATCGAGATCGGAGTGGCTACATCTTCTTTTATATGCACAAGGAGATATTTGATGAGCTGCTGGAAACAGAAAAGAACTCTCAGGCACTTAACCTGGAAGTGGGGAAGACCACTCGTCAGGTTTCATGAGGAACAAACCCCTGGGTTGGCAGTGTGCACTGCATATTCTCTCTTACTGCCACCCACTTCTCTTTCCTCTGCCTGAGAAGAATTTGGAACTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACGAGAACTGCAATTATGCGGAACGCTCCATATTAATTGTTTTATGGAAACTGGTCTCACATCTGTAGCTGATTATCCTTTTTTTTCTCCTACAGGAGTGGCACTTCCTTTTGTCTTAGGAATACATGTTGTAAATATATATATATATGTACATACACACATATTTGTGGAATGAATGGAGCCTTAAACAGTTAGAATAGGCCACCAGAGTATGCCTGCTCAAAATTAATAGCACAGCAGTTTGGAAAAGAAAAGTTGTCAAAGAGTCCATTCACTTGAGAAATGTATGAGGATATACATATCATTTGGCATTTAGCTTTTATGTTCCTTGAGTAATTTCACTCAAGTTTGATCTTTCATGTGTGTTTCTTATTAGTAAAGTTCACTGGAAAGCCAGCTCTCCATGTTACACTAATGACAGTTTGTCCTCCCGGCAAAGGAGGGGCATTTCTGCCATCTGACTTGAGGAGCTTTTATAAAAAATATATATATATTTCATGGATTTGTAATGCTTTTGCTGTTTACATGCAGTCCCAAGAAATGGATTTTTGGTGCTTTGGAATGTGCTGTGTTGCCACATTTGATATTCATTGTACACTTTGTTTTCTTTGAAAAGAATCTTCACACAGTATGTTCATTGTGTATCATCTGTATTATTGTGATGAAGATAGAATCTTTTTTTTTTCTTCTGTGTCATTCTTCCATGGAGCAAGCATTACCCTAACAGACTGAAGCAAAAACTGTAAGAGGTAGGAAAGTGATGTCCCAGTTGGGACTCCCCAACAAGAATACCTAAGGAAAATGAAGAATACTAGCATCTCTGTCTCCCAGACATAGAGAGGTCAGGAGGAGTATTCTTGTGTTCAAGCTGAAACTCTGGACCACTAAAGCTGAAAGCCCTGCTGCAAAGGTGAAATTGAGCACGCGAGCTGCGGGAAAAGCTTAACCATTAATCATTTGCCTTGCTGTTCAAACAGGGTGAGAATTAAAATGTGATAGGTTTAGGTAATTCCAGAAGCTAACAAATAACAAAGGTGCATAATAGATTTATTACTTTTTAGGTGCTTTGAGTTGAGGTCAAATGGGGGTGCAACATTTAAGTGAGTTATATCACTCAGCTGACATAACCTGCTTGGTTAAGCAGCTTGTGAAACCATATAAAGAATGAGTTTGAGAGTAGAATTCTCTGTTCCTAAAATAAATTTGTGAGGCCAGGAATCATTAGGATCACACAGAGTTAAGTATAGCAAAATGAAACCTTCAACATTTTCTTTCATTTTTAAGTCCATCATCACAGAAGATGTAACATCTTTTCTAGAAGATTGCCTTAAGAGAGCTCCAGCCCTACTCTTGAAACTTGGATATGAAAAAAAAAAAAAGAAAAGAAACTTGGATATGTTCTGACATAGTAACCTGTTCTAAAATATTGAATCTTTCAATTGTAAGTGGCCCCAGCACTTTTGCTTAACTACTGATGAAAGCTTTGTCTCCTACCTGTCAATGTCGTGAATGTTGCTGAATGGTGTGGTGGTAGGACATGCAGGAGCAGTATAGAGCAGGGGAAAATACTTGTTTAAAAAGCTAGCTTTTAAAATTTTGTTTCCACTAGGGAGGCTTTTTTTTTTCCCCTTGGGAAAAAAAACTATTTTCTCATATATGAGTGAAGTGGTAATCAAATTCTTTAGCTATTTATTACTTCTCTGTGTCTATACTTGAGAGTTTGAGAGAGGTGCTTTTAAAAATGGGAATGATTTGACGTGAGTGGGTGCATTTAGGGCATTTAAACAAGTAGAAGTGATGCCGTAAGCCCAGGTTGCCCATGAGTATCCTTGTTTGACTTGCTTTTCGTAGCTTGTGTGTATGGTTTTGAAGTACACTTGGCTTAAACCTAATTTAATTTGCTCTTCATGTCTCGGGCAGGACTTACTAGATCAAACTAGGAGATGAGTTATCTCACTGCTCGTATACTTGCACGTTTGGGACTTGAAGTTCCGTAGATACGTCTGTTGTTTTGGCCTGGTCAGCCTTCCTTTCTCCCTTCACTCCTTCAGCTATTACCCCTTTCACTACTAAGTTAATTTCTCATTTTGGTTCCGTGAAGGGTTAATGACTACAGATGGAAAGCAGCCAGACCATATTGATGGGGTTTGTTTTCTGTTTTTTTTTTGAGCTGACAGTATTTATTTTAAAATTACCGGTAGATTATATTTTTTGTGCAGTTTGCTCAGAATCAGAAGATGGGGCACTTGACATGTTAGTGCCAGAAAGGGACAAAATAGGTAAGGACAGAGTGCTTCAGTTCCAGGCAGCTTGCACAATAACTAATATTCCTATTGAAAATACCAAATACGGTTACATTACTTTAAATGACTTTGAATTGAAACTTGACAGTACTTAATTTTACACACAGTTCATCTTAATTGGAATATTTTGAACGGGAAAATGAAACTAAAATTCAAACATTAATTCTTACCACCTAGTATTACTACAAAGGATTGGAAAGTTGCAGGTGGCCAGATGTTACTATCATTTTAGAAGTCCAAACTATAATTTAGGCTTACAGGAAGATAGATTCTGTTGTGTTGGGAATATGTATGTGTGTACAAACTCTGAAGTTTTGTCT EMBV3_14256 AGGGACACAGTGCCTGTAATCGCTGTTTCTGTGTTCATTCTCTTTCTACCTGTTGTCTTC Gene GeneID:518522|OSTM1:NM_001075776:29_cdna UTR3_Alt 3 NULL GeneID:518522 9 GENE OSTM1 NULL osteopetrosis associated transmembrane protein 1 EMBV3_11831 GTGTGGCAGTCTGTGAACACTTCCGTGTGAAAACGGTGTCAGATGAATCCCTTCTTAAAG Gene GeneID:508150|LOC508150:XR_084587:282_cdna Constitutive 0 NULL GeneID:508150 15 PSEUDO LOC508150 NULL similar to density enhanced phosphatase-1 EMBV3_36870 TGATCCTGCTTAATCTGAACAACAATCAGCTTACATGGATTCCTCAGGAAATTAGCAGGG Gene GeneID:617064|OTUD6B:XM_002692846:235_cdna Constitutive 2 NULL GeneID:617064 14 GENE OTUD6B NULL OTU domain containing 6B EMBV3_32819 ACAGTATGCAGCAACACAGGGCTCATCATACTTGTTTGATACAAAGTTCAATTTGCTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20181 TATGACCTGGGTCTTGGTGATTTGGGGGACGGTGCTACACCTGTCTCCACTGTTTGTTTT Gene BVT0102_006773 + 0 NULL GK000030.2:91447088-91452107 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247560 TCONS_00247557 TCONS_00247558 TCONS_00247561 TCONS_00247556 TCONS_00247559 TCONS_00247564 TCONS_00247562 TCONS_00247563 1 XLOC_151359 Coding TCONS_00247556 XLOC_151359 Coding Coding ELK1 X:91448467-91466849 j TSS185359 5657 1 TCONS_00247556_4 386 0.0624005656708503 6 0.692562972634786 0.00102790707828579 0.000991563736701369 2.83900282677019e-07 4.18363441412004e-05 4.93742486022138e-08 6.49136547075821e-05 0.00115565251595201 1.24814874795078e-22 0.00127404615027483 2.18050380810634e-11 2.22880329094325e-16 0.000146290723179865 0.000187194306123451 0.000340782868349682 0.000705990451757404 0.000128060096497949 1.10164018379566e-06 0.00080934453305904 0.000583995360747789 0.00046795975262 0.000569965976423441 0.00179242947863179 0.000544147302340186 0.000329350057097978 1.41277053702408e-08 0.00160733143724789 0.00130969556941215 0.000143033152569805 1.07427963248216e-07 3.47032195435476e-17 NM_001191236.1 ELK1 Bos taurus ELK1, member of ETS oncogene family (ELK1), mRNA. 0.0 3494 100.00 0.342230864415768 NM_001114123.2 ELK1 Homo sapiens ELK1, member of ETS oncogene family (ELK1), transcript 0.0 2910 84.53 0.458546933003359 TCONS_00247556_4 sp|P19419|ELK1_HUMAN ELK1_HUMAN ETS domain-containing protein Elk-1; 0.0 566 86.53 0.99740932642487 1 coding 0 0 0 0 0.0766964908805981 0.588328176251577 -0.0244026228194779 0.844691362414569 GAGCCCGGGCCTGGGGGGCGGTGGGGCAGCGCATGGAGCCCCCGCCCCCCGGAGCTGCCAACACCGCCGCTGCTCTACGCGCAGCTGCTGAGAGAGCAAGGCAATGGCCACATCATCTCCTGGACCTCACGGGATGGCGGTGAGTTCAAGCTGGTGGACGCTGAGGAGGTGGCCCGGCTGTGGGGGCTGCGCAAGAATAAGACCAACATGAATTATGACAAGCTCAGCCGGGCCTTGCGGTACTATTATGACAAGAACATCATCCGCAAAGTGAGCGGCCAGAAGTTTGTCTACAAGTTTGTGTCCTACCCTGAGGTTGCAGGGTGCTCCACTGAGGACTGCCCGCCTCAGCCTGAGGTGTCTGTCACCTCCACTCTGGCAAATGCAGGCGCCACAGCTGTACACGCCATACCCGGGGACACTGCCTCTGGGAAGCCAGGCACACTCAAGGGTGCAGGAATGGCAGGCCCAGGCGGCTTGGCACGCAGCAGCCGAAATGATTACATGCGCTCAGGCCTCTATTCCACCTTCACCATCCAGTCCCTGCAGCCACAACCGCCCTCTCACCCTCGACCTTCCACAGTGCTCCCCAACACCGGCCCTGCAGGAGTAGCAGTGCCTCCCTCGGGGAGCAGGAGCACCAGTCCAAACCCCTTGGAGGCCTGCCTGGAGGCTGAGGAGGCTGGCCTGCCTCTGCAGGTCATCCTGACCCCACCCGAGGCCCCAAACCTTAAATCCGAAGAGCCAAATATGGAGCCTGGGTTAGGCCGGCCACTGCCCCCAGAAGTCAAAGTGGAAGAGCCCAAGGAAGAGTTAGAAGCTGCAGCCAGTGGGGAGGCGGGGTTTGTGCTGGAAGCCGTCAAGGCCGAGCCCTTTGAACCCAAAGTCGACCCAGAAGTCCCTCCAGCAGAGGGCGTGCCAGCCCGGCTGTCTGCTGTCGCAATGGAAACTGCGGCGCAGGCGGGCAGCCTCACGGCTTCCACAACACCCAGCACGGAGATCGCCCAGCCTCAGAAGGGCCGGAAGCCCCGGGACCTGGAGCTTCCACTCAGCCCGAGCCTGCTGGGTGGACCAGGACCCGAACGGACTCCGGGATCGGGAACTGGTTCAGGTCTACAGGCGCCAGGTCCAGCTCTGACGCCTTCCCTGCTACCTACGCACACATTGACCCCGGTGCTGCTGACTCCCAGCTCGCTGCCCCCCAGCATTCACTTCTGGAGCACACTGAGTCCCATTGCACCCCGTAGCCCGGCCAAGCTCTCCTTCCAGTTTCCGTCCAGTGGCAGCGCCCAGGTGCACATCCCTTCCATCAGCGTGGATGGCCTCTCAACCCCCGTGGTGCTCTCCCCAGGGCCCCAGAAGCCATGACTATCACCACCACCACCACCACCACAACCACCACCACCCCTTTCTGGGGTTACTCCTTCCATGCCCTGAACTTCTCTCCAGCCAGCTGTCTCAAGGAGAAACATAGTTCAGCTGACAGACTCGTGCTCCAGTCGTGGTTGGGTAGGGATTCTTAGGAAGAAGGATCTCTCAATAACCCTTCCACAAAAAAACATACAACTTCTCTCTTCTTGATCAGTCCCCCAGTGGCCGCTCTTATACGTCTCCTACTGCAGTGGTGGGGATGGTTTATTTATTTATTTTTTGAAGGCCACTGGGAGGAGCCTGGCCCAACTCTTTTGGAGGGGGTGGCAAGGGCATCTCCCCCGTATTCCACATTTTTTCCCCAAGATGAGACAATCGGGGTCTGGCTTGAGACAGGCCTTTCTTTATTTATTTCTCAGCCTGCCCTTGGGGAGCTGAGGGAGCCCTGTCTTCACTTTGGGGTATGGGTAGAAGAGCTAGCTTGTTGTAGTTTATTATTCCTGGCCCTCCCCAAGGGTCCAGGAAGAATTTGTGCCATTTAATGGTTTGGGAGTCTTGGCCAAGGAAGACTCACACCCTTGGAGATGGGAATTTCCACCTCCCCAGCCTTTCTCTCAGACAGGTTGTCCTTTCTCAACCACCTTTTCGGCCAGGGAGGAATGCCTCTTTTGTTCTTCTCCCCCTGAGAAGCCATTCCTGTGTCTGCCAAACTCCTGGGGTCCTGCCTGTTACCTCCCAATGGAGGGATTTTTGGGGAGTGGTCCCCGTCTGGGGGGCCCCTCCAGCCAGTACTCCAGGTCTCCCTGTCCCCCACCCCCTTCCATTTTGATAGTATAATCTATTTTTAAACAGGGCTTTTCAATAAGGGAGAGGGAGGTATCTCTTCCTATATCTGAGATGGGGTGGGTGGGAAGGAAGGGATTTGGGGGATCTCCCTGCCACCCCCAAGTGTTTATTTTTGATACCAAATGTGTATTTTCAACTCCCTCCCAGCCCCCCAATTTTCCTGCGGGCGGGTACAAAGGACCCTTTATGTGTCCCTGGAGTTGGGAGGGAGGAACAAGGGACATAAAGCCTGCTCAATCTGAATTCCAGGCTGGAGGAGGGTGGGTTCAGAGGACTCCTGGGTTCACCTCCCATCAACACCGTCCCAGCCCAGGCCTATGACCTGGGTCTTGGTGATTTGGGGGACGGTGCTACACCTGTCTCCACTGTTTGTTTTACTTCCTCCCAAATGAATTTTTTTTCTAAGAGTCCCAGAGAATGGGGAATTGTTCCTGTAAATATATATTTTTAAAGGTGATGCTGGAGGCTGGTAGCATTTTTTTCCCTGAAGCTGTTGGGAATAACTGTGTGCAAAGGCACGACTCTGTGTGAAAGGCCATAAGGGTGTGAGATTGATCATGGGGGAGAGAGCATAATGGTGTGTGTCAGAAAGAGTAAAGACTGCAGATTGGTAACCAGGTATGAGAAAAAGAGAAAACTCTGGCAAGCTGTGATTGCACGTGTACATTTGTGAAGCCATGTATTGAGAGAGTGGAAGTTGTAACCACAAACTTGACGTTGTGTCTATGTGAGAAATTGTGGCTGGGTGGCAAAAAAATACAAAAACTGAATGAGTGATTAAGATAGTATGCCAGAAACTGGTGCTTTGTGTGAAACAGTGTTTATGAGAAGGAAGTGGGGATTGCACATCAGTCACTGTTGGACAAGCTGACGGTGAGCAAGAGAGAGTAACCAAAACAACATGTGAGAGCCTGTATAGGCATGAAAGTGCAGTGGAGATTGTCAGGGACAGTGCATACGTGAGAAACTTCATTATAAGTAAGCAGGTGACTCAGTGTTTAGGAGATGGGTTGTGTGTGAAACCGTTCATGCAAGGCTGTTGGATCAACTAAAATAATGAGAGCGTATGTGTGAGAGGTTGATTGTATGAGAGAAAATAGCTGTGAGGCCAGATGGGTGCCTGAGATTTAAGATACCAGAATGCGTGATTGTATGTATGAAAACTTTCTGCGAGATTAAACTAGCAAAGACTGCATGAGAAACAGAAGAAGTGGCTGCAGCTGGGAGAGCATGAGAGGCTGTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCGTGTTCCTGAGCCTAGTGGCAGATGGATGCAGTTAGTACTCCAATCTAGCCAACAGGTTTAGGGACCATGGAAGTATAAGAGAAGATGATGGTGAGACAGAGTGAGTGGAAGTGTGCTAGAGACTACTTCACTGTGAGTGAGAGGCGAGGAGTAAAAAGAAGGAAGGAAGTGCCACGTGAGAGAAAACTGATGACTGAGCAGTGTGTGAGAGTGAAACATTTCATGAGAGACAGTAAACCAGAGAAAACATGCTGGTGAAAAACTGAGAAGATGAAGCTGAGCAAATGAGACACTGAGAGACTATGCGATCAGTTTGTGCAAGAAATCTGGGAGGCTCTACTTGTGTTTGAATGTACAGGATACTCTGGCTGGATGGTGTAAACAACTAAGATGAGCTGTGAGAGACTGTGTGTGTGAGACTTGCAGAGAGCCTAGTAACAGTTGTGAATTAGTGACTACAGGATGTCAGAGGGTGAATGAGGGCAAGTGACTGTGACACTGTACCTGTGACAGAATGTCTGACAGGCTGAGGGTCTGTGAAAAACTCTAAAAGAGACTTTAAAGACTATAGAACAAAGACTGGGCATGTTGGAAGCTGCTTGCAAAGAAATGTGAGACTAGGTGACTAAGACAGTGTCTGAGACACTGATTGTGCATGAATGAAATTCAGCCTAGTCAGGCACTCTAGGTGTGTGAAATGGGCATGAGTATGGAGAGGTGGGAGAGAGAGTAACCATGTGTGTGCAGGGAACTTCCGGAGGAACTAGCGGTGGCTATAAATCACCAAACATTTGTGTATATGAGAAAATGATGGCCCGAATGAGCAGTTGAAACATCAAAACGCATGACTGTGTGTATGTGCAAAACTGACCGGTGAGAGTCATTGTGGCCTTGGCTGAAGGACACAGGCTAGATGACGTGACTGTGTGGGAAACTGTTCTTGAAAGAAGACCACAGTCAGGCTGATGTCAATGACAGCAAATGACTCCCTGAAAGAGTGGCTGAGAAAGGCTGTGTGTTCAAGTATGTATGTGATCTTGTTTGTATGTGGCTGTGGTAGAAGCTGTAAATTCTGAAGTGTGTGTATAAATATGTAAAAAAGAAGAGAGATCTCAAGAGAGAATGACTGAAACTGAATTAGTGGGTGAGAGCTGGTGGATGGATTGTGCCAGGCTTAGGGGAAAGCTCTCTTCTGTCTGTCTTCTTCCTCCTTGGGCCCTTGGGTTGGCTTCTCCCAGTTCTCCACAAGGTGAAATGCTGGAGTTTCTCAGGGCTTAGCCTGGGCTTCCCTTCTCTCTTCTCACAAGCCAAGCCCTCTCCAGATTGTTTGGTCCAGTTCCAGCACTTGAAACACTGCTGCTCCCCGCCATGATGATCACATTTTCACCTCCAATCCAGATTATTCCTCTAAGCACTTTTCAGAATCTTGAAAGCACTGTTTGTTGCATTTACTTACTCATTCAGCAGATGTTGATTGAGCACCTACTGTTTGCTGGTGCCCATCCAGGCCCTGCAGATACAGCAGTTAACAAACCAGACACAAATCCCACCTTTGTGGAGCTGGCATTGTAGTGGAGACAACAGACAAGCAACAAATGCATCGTGGTGGTGTTGCAATGATTACATGAGATAAGACTCTCAGTCTTTGTTTAAATAAGAAATCTGCAGTCATTTTATTGCCTAAACGTGTGGGAGAAGATGAAAGTAGCGACAGTCCTCTTCCCAGGGGAACCAGTAAGTAGGTACAGAGTTTAGGAATAAATGAAGTATCGATTATAACATCATTACCAGGGCAAAAGATGATTAGATAAAGCAACCAACCAGAATTACAGGTTTCTTGAGGAGTTTGTTTTCATAGGATAACAGCACTGAAGTCCTGGAAACTTAACAAGACCGCTTTGTTCAAAGACAGGCTTATGTTATCAGAAAACAGTACATCTGTAACGGATATGAATTGTCAACATGCCTTATCACCCATAAAGTAAGACCAGTATTCTTGAGAAAGCTCTGTTTTAACACACCTGACCGAATCAAATCATTCAACCTTGTTTTAATTTGCAGAATAGTGCTCCTAAATGGATGTAGAGGAAATGAGACATTGCCTTCCTAACTTTCTTACACTCCTTTTTGTTAATTAAAAAGATTTCTGTTTTTAAAGCA EMBV3_03190 TGGTCTCCGGGTTGTGAGCCTGCTTGATCTGGTAGAGCTGGTTGATGTATCCCTTCATGT Gene BVT0102_213359 + 1 EMBV3_42011 GK000010.2:6935038-7013624 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012419 1 XLOC_007863 Coding TCONS_00012419 XLOC_007863 Coding Coding - 10:6955737-7008763 - TSS9430 1298 2 TCONS_00012419_3 101 0.187981510015408 6 0.975634134842056 0.000254345247309795 1.25930040968507e-10 5.09043269006898e-11 7.7969420164303e-11 4.91132723628721e-11 2.50942996382988e-05 6.7610164014687e-11 4.04871567701338e-11 9.78088982269026e-11 0.000174342902845358 7.05448874286278e-06 0.000289250227351201 0 0 0 2.47802369645564e-10 0 4.8326239771419e-06 4.42670392061779e-11 0.000406019988150547 2.13800194192629e-11 0 0 1.29157504178281e-05 5.33780065927692e-06 6.43272115818328e-11 0.000117195045173565 9.61998051147092e-05 2.99198928496867e-05 3.78042734272226e-11 XM_005193560.1 ANKDD1B PREDICTED: Bos taurus ankyrin repeat and death domain containing 1B (ANKDD1B), mRNA. 5e-107 392 100.00 0.166409861325116 NM_001276713.1 ANKDD1B Homo sapiens ankyrin repeat and death domain containing 1B (ANKDD1B), mRNA. 2e-36 158 79.13 0.152542372881356 TCONS_00012419_3 sp|A6NHY2|AKD1B_HUMAN AKD1B_HUMAN Ankyrin repeat and death domain-containing protein 1B; 4e-10 57.4 60.00 0.495049504950495 0 coding 0 0 0 0 0.0967992358821006 0.442600577030085 0.0121352092823628 0.87955750399669 CTTTATTTATATTTGAGGAAGTCAAGGCCAGAGGGATGTAACACGAGAAGGACTGAGCACCCCATTGCTGACTTTGAAGATCAATATCAGTGCTTTGCAGACAGCAACTCGGAATGGCCATGCATCATTGGTCAGCTTTCTTCTCAATGAGAACGTTGATCTGCACCAGAAGATGGAAAGGCTTGCAGACTCCTTTGCATGTAGCTGCTGATTTTGGAAACATGGAACTTGAAACCGTGCTGAAGGCTGGCTATAACTTGAAGATTGTTTACAAGAGAGTCTTCAATGGAGAATGAAGTTCGACAGGCACAGTGAAGAGGAGGTCCCATTTGAAATCCAGATGCCCACCCCACAGAGGGCACTGCCTTGTGGTCCTCTGAGAAGGGGGACAGTACAGCAATGTGTCTGGAGTCACCAGATCAGAATTCAAGCCTGGCTCTGCCACCTTCCAGTTTGGGACCTCAGACCAGGAGCAGAGCGAGAACATGAAGGGATACATCAACCAGCTCTACCAGATCAAGCAGGCTCACAACCCGGAGACCAGGCACATTCGCAGTCTGCTCTGGCACCTGGTTATGTCAGCTGAAGGCCAACGAGCGGCAGAGGCTGCCCGTTTGCAGAACTTTACGGACGCCCAGATTAGAGCCATCGAGGAGCAGTGGTCAGGTCAGCATGGTCCAGGCCATGTGGGCAAGAGGCAGTCAGTTCACTTACACCACATACAAGTACATTATGGCACTTTTATTGCTAATTCTAAGGATACATTTTCATGTGAAAAAAAAGGAAGATAATGCATTGAAAATGTTGAATATTGATTACAGTTTCTAAAAAGATTTCTTTTGTATTGTTAAGATTTCTCCTTGTTGCTAATTAGTCATATAGTGTTCTGCAAAGTCTTCAGAAAAATGGAATTGCCTTCTGGAAATTTCTCTCGACCTAAAAAATTGATTTGGAAATGCATTATGCCTTCGGAGTACTTGCTGTCAGGATAAAGGTTTTGGTGTATTGCATTTACACATGACAGGGTGCCTAGAATGCGTCTAGTGCTGTGAGGGGATCCATACGTCAGCTCTGTCAGTTGCGGTGCGTGTTTGATGGAGTTGATAATCAGGTTGGCATGACAGTATCAATGGTAACAGTCACAATCCAGTTACACTGTAGCTGGCATGAAGGAAGTGGTGGTGGTGGCTTAGTTGTTCAGTCATGTCTGACTCTTGTGACCCCATGGACTGTAGCCTCTGTCCGTGGGATTTCCCAGGCAAGCCTACTGGAGTGGGTTGCCATTTCTTTCTCCAGGA TCONS_00015803 TCONS_00015804 TCONS_00015805 TCONS_00015806 TCONS_00015807 TCONS_00015808 TCONS_00015809 TCONS_00015810 TCONS_00015811 TCONS_00015812 TCONS_00015813 TCONS_00015814 TCONS_00015815 TCONS_00015816 TCONS_00015817 TCONS_00015818 TCONS_00015819 TCONS_00015820 TCONS_00015821 TCONS_00015822 TCONS_00015823 TCONS_00015824 TCONS_00015825 r 3' 2700 TCONS_00012413 TCONS_00012412 TCONS_00012414 TCONS_00012415 TCONS_00012416 TCONS_00012417 s 3' 20701 EMBV3_13784 CACAGGATCCACATCGACTCCGAGGCCCAGCACTGACCCAGCCAGAGGCCTTCCGAGAAG Variant GeneID:515410|PDLIM4:NM_001034491:54_cdna 375^556 3 EMBV3_24267 GeneID:515410 7 GENE PDLIM4 MGC127818 PDZ and LIM domain 4 EMBV3_16528 AGCAGCAGGAGTTCTATGGCTGGCAGATGAAGCAGTTCCAGAACAGGACCCAACTCATCA Gene GeneID:100337456|LOC100337456:XM_002689051:17_cdna Constitutive 0 NULL GeneID:100337456 7 GENE LOC100337456 NULL butyrophilin-like 9-like EMBV3_41844 GCCTTCACAGCAACATCCAGACACTAGCATTTAGCCAAATAACTGCACCATGACCGAACC Gene BVT0102_143283 + 0 NULL GK000007.2:3387156-3419013 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211459 TCONS_00211457 TCONS_00211458 1 XLOC_129878 Coding TCONS_00211459 XLOC_129878 Coding Coding JMJD4 7:3381889-3389101 = TSS158890 3664 1 TCONS_00211459_4 424 0.107532751091703 6 0.492719456386077 0.000220557055209898 0.000117401280374471 3.49124400981232e-16 8.89104215308572e-06 0.000157627161594029 6.35697440938257e-12 2.03877037803084e-05 0.000103010991076134 0.000129199114614112 0.000359129619161544 9.424090942837e-06 0.000130986573011778 0.00010556941128298 1.93153966379208e-13 4.46238502842899e-05 0.00108385184781891 0.00118952894242172 0.000195040062780208 0.000322557871056915 0.000241047872764827 8.61632778170681e-05 3.70420305796145e-06 4.26419622880848e-06 0.000384319909419272 0.000621769182436927 0.000632260724846639 8.36169300544595e-11 4.75789244825264e-05 6.12569614109096e-05 0.000114470168417955 XM_002688513.3 JMJD4 PREDICTED: Bos taurus jumonji domain containing 4 (JMJD4), mRNA. 0.0 6608 100.00 0.999727074235808 NM_023007.2 JMJD4 Homo sapiens jumonji domain containing 4 (JMJD4), transcript 0.0 1104 79.76 0.343886462882096 TCONS_00211459_4 sp|Q9H9V9|JMJD4_HUMAN JMJD4_HUMAN JmjC domain-containing protein 4; 0.0 677 75.65 0.995283018867924 2 coding 0 0 0 0 -0.0517859195899104 0.834418282705147 0.0107607342440922 0.890538798529013 CGGACGCCCAGAGGGTTTACTCCGGAAGCAGTTTTAGCAAACACTTCCTTTTTCTTCTCCCAGTTTAAAGAGCAGAGACGTAGGAATGCCCAAGTGGGATTCCGGGCTTCCGCCCTTCGCGGGTCCGCGGCCGGGAGACTTCACCGCTGTTTCCATTATCCGTACCAGCCCCTCTGTCCCCGCTGCTCCTTCGACATCCCCCGAGCCCCGCCCCGTTCCCAGCAGCCCTCCAGGCTCCCCGTCCCCCCGCGGCAGACTCCCAGCCCAGGTTTCCCTGCACCCCACGGACGCAGAACCTGGCCCGGGATGGACAGGGAGACGCGCGTGTTCGCCGAGAGCCACTTCAGAGGCCTCGAGGGGCGTCTCCCCAGCAGGGTTTGTCCGAAACTGGACCGCGTGGACTTCATCGAGAAGCCGGACTCCTTTTCCTACGCCGACTTTTTCAAGGGCTACCTGCTCCCCAACTTGCCCTGTGTTTTTTCCAGCGCCTTCACCGAGGACTGGGGCAGCAGGAGGCTCTGGGTGACACCCAGCGGAAAGCCCAACTTCGATTATCTGCTTCAGAACTATGGAGACGTGGTTGTACCTGTTGCAAACTGTGGGGTCCAGGAATACAACTCCAACCCCAAAGAACACATGCCCCTCAGAGACTACATCAGCTACTGGAAAGAGTACATTCAGGCAAACTACTCCTCTTCACGGGGCTGTTTATATCTCAAAGACTGGCATCTGTGCAGGGACTTCTTGGCAGAAGGCGTGTTCACCCTGCCCATATACTTCTCATCTGACTGGCTCAACGAGTACTGGGACGCCCTAGACGTGGATGACTACCGCTTCGTTTACATGGGGCCCACCGGCACTTGGTCGCCGTTCCATGCTGACGTTTTCCGCTCCTTCAGCTGGTCCGTCAACATCTGCGGGAGGAAAAAGTGGTTCTTCTTCCCACCAGGGCAAGAAGAAGCCCTGCGGGATTGCCACGGTGGCCTGCCCTACGACGTGACCTCCCCCACCCTCCTGGATAGCCGCCTACACCCCATGCGAGATCGCTGTGGCCCACCACTGGAGGTCACGCAGGAGGCAGGCGAGATGGTGTTTGTGCCCAGTGGGTGGCACCACCAAGTCCACAACCTGGAGGACACCATCTCCATCAACCACAACTGGGTCAACGGCTGTAACCTGGCCAATATGTGGCACTTCCTGCAGCAGGAGCTCAGTGCTGTGCAGCAAGAGGTCATTGAGTGGAGGGACACCATGCCTGACTGGCATCACCACTGCCAGGTCATCATGAAGTCCTGCTCTGGGATTAATTTCGAAGAATTTTATCACTTCCTGAAGATCATTGCTGAAAGGAGGCTTCTCCTCCTTGCGAAGGGGATGAGCCCTGGCCAGGTGGAGGGTGGCGAGGACACTGGGTTGGGCCCCCAGCAGGCCGCATTTGACATTGGCCGCATAGCTGAGGTGCTGGAGTCCGTGGTGGCCCACCCTGACTTCCAGAGGGTGGATCCTAGTACATTCTCACCACGGCCAGAGGTACTACTGCGACAGCTGGAAGAGGCTGTAGCTGCCACCACATCCCTTTAGTGCGTGCTCTGAGGACTGGGTGAAGCACGTCTCTGGGGGACGCTGGAGGCACCAGTGTGGAAGGCAGTCATCCTGCTCCAGGATCCCTTCTGGAAATTCTTCTGGAAATAAAGCTCTGCCCTCCTGTGTGGCCTGGGACTTGTCACCTCCCCGTTGAACTGTCACTTCAGTGTCCCAGGCACAGATCCTGCTCTTAGGGGTCTGGTATGTCCTGGCTCTCTTTTGGCATCCCTGGGGCCCTGACGCCTGTCCAGAAGGTCCAGGCCCCTTGTCCTTGTGAGGCTCAGCCAGGACTGGGAACTGGATCTTGTGAGGGGGTGCATGGGGAAGTGTTGGTCATTTGGACCCAGGGCAAGGAGGTTAGGAATGTGCTGGGGACTCAGGAGTGGGGGTGGCATATGGCCAGGTTTTCTTCCCCCTTCTTCCCCCGACCAGCCTTCCCTCAGCAAAGGCTAGCACCCATGCTGACAGCCTCCCATCCTCAGCAGTGCAGGGCCCCCTCTGCAGTAGCACCACATCCCTGCATGAGTCCACACATCTCCCACTAGAAGAGGGTTCTCAGTGTAAGGTAGAGACTGAGGCCCAAGGCAGACCCAAGATCCAAGGCCTATGTCTCCATCCCACATTGGAATCACTTTAAATAGAGCGTTCCTTCCCTCTTCTGGCCTTTGACCCTCTTTTCCCCAGCAGGATCCTGTGCTGTCTATTAGTCAGAGCTCCAGGCCTCATGTGCTATCCTTCATGCAGGTCTCCCAGATGTCATAGGTACATCGTTCAGGTGCTCTTTGGGCCCTGGCAATAGGGCAAGGCAAAGTCTGTCCCCCTCCTGCTTGCTACAGCAATACCTTTCCCCTGCAGAGACTCTGAGGTCACCCTTGTAGCTGCACACCCAGTGAGGCAGAATGCCTTGTCTGAGGTCTCCCTGCGGGCCAGGTAGGGCCCAGAGGCCAGCTGGAGCCTGGGTCTCTTCCACACCTCATACACCATCCAGCTTCAACTCACTGCACACCCACTATTGGCCATCTAAAGTCACTTTGCAAACTGATTCAACAGCCACTCTTTGTGCACTCATTCTGCCCTGTCCAGAATTTATCATTACACTCTTTTCACACTTATCTGTACCATCCAGTTTCCACTTGTTGCACACCTATATTATATGCAGTAGTCACAGTTTTCAGGATTCTCCACAGAAATGGAACCAATAGAATATATGTAGAAAAAGAAGTGTTAAGGGCTGGTGAGTGTGGAATTTGCATGATAGGCTGCAGATCCAGGGAAGAGCTGACATTGCAGTCTTGAGTCTAGAGGCTGGAAATTCAGGCAGGGCTTCTGTGATCCAATCTACAGGCAGAATTGCCTTTTTGGGAAACCTAGGTCCTTTGCTAGTAAGATCTTAAACTGATTTAATGAGGTCTACCCACATTTTGGAGGATCATCTGCTTAAAATCTCTTGAGTTGAATGTTAATCACATTTTAAAAATGCCTTCACAGCAACATCCAGACACTAGCATTTAGCCAAATAACTGCACCATGACCGAACCACACTGGCACATAAAATGGACCATTGCAGTCACTCCTTACATATTCACTGGTCACTCTGCTTCATCCAGTGCCCCGTTCTTACATGCCCACTCAGACTCACCAATATCTCCTTGCACACTCACTGTGTAATTAAAAAGCCGGTGACTGTCATTTCCAGGTCATTTTGCACATCTACTTGCCGTCTGGAGTCACTGCATACTCTCCCTGTGCAGTTCACCAACCAGTCTACGCGTGTGTGTCCCACTTTCACTCCAGCACACTCCTGTAGCATTAACAATCGCTCCTCCCATGCTCACCATCAGATTTTCTATTCTCACACACTACTGTGTGCTAGTCTATAAAGTTATTGCACACACACTGTGTAAGACTGCCCGCACACTGGGGCCAGGTTATCAACTGCCCCCCATGCTCCTCACTCTTCCAGCTTCCCCTCCTACACAGCCATTGTGTGCCATTTAACAGTGCTTGCACACTCACTGCAAAACAACTACTCCACATTTCTGTGAATTTATCTGTCTTTCCTTGCACATTAGTTCTGCAC EMBV3_40212 GGACAACCGCCTGAAGCTCACCTTTGCTCCTTTCCAAGTGCAATCCCTGTTGCTCCTTCT Gene GeneID:541086|MAN2C1:NM_001110085:130_cdna Constitutive 1 NULL GeneID:541086 21 GENE MAN2C1 MGC127782 mannosidase, alpha, class 2C, member 1 EMBV3_33773 CTGCATTGTCATGAGCACATACGGCTGGACAGCAAACATGGAACGGATCATGAAGGCTCA Gene GeneID:781339|LOC781339:XR_083814:52_cdna Constitutive 0 NULL GeneID:781339 12 PSEUDO LOC781339 NULL similar to 90-kDa heat shock protein alpha EMBV3_17695 TCTTACGGAACGTCTCCTGACAGACTCCTTGCCTGTGGAGGCAGAAAACAAGCTTTGGTG Gene GeneID:510458|SUSD2:XM_002694669:218_cdna Constitutive 0 NULL GeneID:510458 17 GENE SUSD2 NULL sushi domain containing 2 EMBV3_03245 CCAAGTTTCTTTCCCAGGACCAAATTAATGTGGAGGATCTCTTCAGGGAAGCAGGTATTG Variant GeneID:539277|CALML4:NM_001034671:225_cdna 81^410 2 EMBV3_22615 GeneID:539277 10 GENE CALML4 MGC127323 calmodulin-like 4 EMBV3_37232 AGTTTCTGGCTGACAACAGTGAGACCTGACTTGCAGTTTTCCTCTGCACCATTACCGGAC Gene GeneID:407107|COL4A4:XM_002685639:339_cdna Constitutive 0 NULL GeneID:407107 2 GENE COL4A4 NULL collagen, type IV, alpha 4 EMBV3_34571 TCCAAACCCCAGCCTTCAGATGAAAAAGCCTCACCGGATAAGCATCATCGTTTCTCGCTG Gene GeneID:280905|PYY2:NM_173956:173_cdna Constitutive 0 NULL GeneID:280905 19 GENE PYY2 NULL seminalplasmin EMBV3_16717 GATGCCAGTATGGACCGAGATGATAACCAGACTGGCCAGAACGGATATCTAAATGACATC Variant GeneID:613499|R3HDM2:NM_001078034:43_cdna 877^972 1 EMBV3_24968 GeneID:613499 5 GENE R3HDM2 MGC142849 R3H domain containing 2 EMBV3_04852 TGTTACTCTGTATCCTGATGCAAGAAGAGCCAAGGCTACCTGCTGTGGCCGACTGAATAG Gene GeneID:524130|STARD9:XR_083774:102_cdna Constitutive 0 NULL GeneID:524130 10 PSEUDO STARD9 NULL StAR-related lipid transfer (START) domain containing 9 EMBV3_35379 AGGAAAGATGCCTATAAAGTCTGAAATAACTAACTCCTCCTTGCTGGCAAGTGTGATACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02071 CAAGCCAGTCTTACTTGAGGAATTAGGTAGTAGGTATGGGATGATCACATTGGAGTTTGG Gene GeneID:506074|LOC506074:XM_002695749:452_cdna Constitutive 2 NULL GeneID:506074 19 GENE LOC506074 NULL similar to Chromosome 17 open reading frame 63 EMBV3_38085 ACTGCTCCTTTTATTGGTGCCTGAGTGGAAGACCTAAGAAGGACGGAAGGTCTGTGTTGG Gene BVT0102_055316 + 1 EMBV3_01607 GK000022.2:54252164-54259647 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129156 TCONS_00129155 TCONS_00129154 1 XLOC_078049 Coding TCONS_00129155 XLOC_078049 Coding Coding SACM1L 22:54199057-54254123 j TSS96142 5441 1 TCONS_00129155_9 554 0.0602830362065797 19 0.901534550077182 0.00157204195022591 0.000869954560560045 0.000248654703265955 0.000510000833445041 2.07061874613815e-05 6.79415396816137e-08 0.000643554270957958 7.90677512835065e-05 3.9664718491576e-05 6.79239222134386e-06 2.41559869874945e-193 9.75603230611386e-05 2.49536428472211e-05 6.9903044602234e-06 0.000294328743875617 1.00688515924792e-11 4.99348399352703e-09 1.21022647821021e-05 0.00127214240134618 0.00157069694915179 8.09415934588963e-08 0.000378386801434125 4.58938852566809e-31 1.59793530067225e-05 0.00139245920160749 0.00149717607195366 0.000482552093122382 1.28820896829981e-126 4.69644799213396e-66 1.34687213933612e-79 NM_001102131.2 SACM1L Bos taurus SAC1 suppressor of actin mutations 1-like (yeast) (SACM1L), mRNA. 0.0 4251 99.75 0.435765484285977 XM_005264965.1 SACM1L PREDICTED: Homo sapiens SAC1 suppressor of actin mutations 1-like (yeast) (SACM1L), transcript variant X1, mRNA. 0.0 2327 82.00 0.435581694541445 TCONS_00129155_9 sp|A6QL88|SAC1_BOVIN SAC1_BOVIN Phosphatidylinositide phosphatase SAC1; 0.0 1141 94.38 0.998194945848375 1 coding 1 0 1 1 -0.0184308683514369 0.900260374886057 0.00330596831891559 0.975270950301617 CTGAAGAGCATTCAAGGAAACTGATGCTATTGATGGAAATGTGTATCTAGTTTTTTGGCAGGCAATGTGAAAATATGTACCAAAGTATTAAAAACATCCATGAAATGGACCTTAAAAACATATGTCTGATGGTTCAACATCTAAAAACTTTTAATACATATCAGAAATAATTCAACTCAGCATTATATTTTTAAGTATTAAACTGATGATTCAAATTCCCAAAAAAGGTTAATATTTGAAATATATAGTTTTTTCACGGGCTATCTTCAAGGAATATTTAATGACCATAAATCTCAGACGAAAGCTAAGGGAACAAAATGAGAACATTTGTCAAACAATCTCAAATTTGGAAAAAATACTTGAGGTTTGACAGAAAACAACAAAATTCTGTAAAGCAATTATCCTTCAATTAAAAAAGAAGATTTGGGAAAAAATACGTGTATAGGTTTATTTATATTAAAAAGTATGGAAGAAGTCCATAAGGAAAAATTATGACGCTGATAGTAATGAGGAGGAATTACGACGTTAATAGTAATGATCTCGTGATGGGAATTTGGATTTTTGTTTTGAATTCCCACTACTTTCCTGTATTTTACAAATGTCTTGTAATTTCTTCAGGAGGAAAAAACGTATTGGAGCGTTTAACTGATCGATTGAATGATTAGTGAATGGACAGTGTCAGATGTTACGTTTCAGGTTTCACTCTCATTTCCAACACAGACCTTCCGTCCTTCTTAGGTCTTCCACTCAGGCACCAATAAAAGGAGCAGTAATATATTAGGTAACACCCTCTGAAAGGACAGGGCTGCAGACCCCGAGCACTTTGCGGACCCCCAGGCGACTCGCGCAGTCGCACTGCAGCGTTCCCGCCTCCGCTGCAGCTTAGAGCTCGCCGGATCCCGGGAAACGGACTGCGCGGCTCTTCGCGTCCCCGCGGGGGTTTCTGCTCCACAGGAAATAGGGCCAGAATCTCTGCCTTAAATGCGCAGTTGCGTCATCCGCTAGCTAACCTCCTACCACAGCACACCCTCCACCCCGCAACTACCACCATCCTAGCTGTGTTTTCCTAAATGTATCCCGTTTACAGAGTCTCCTCGTGTGCATCATTAATTAGGGCACTTTGCAATTTACAAACCACCTGAGACAACTCCGGGTTCCAAACCCAGCTCAACAGATGACGTTTCGGACAGAGCAGGCTTAAGGAAATCAACCCCGAATATCCACTGGTAGGACTGATGCTGAAGTTGCAATACTCTGGCCACCTGATGCGAACAGCCGCCTCACTGGAAAAGACTCTGATGCTGGGAAAGACTGAAGGCAAAAGGACAAGGGGGCAGCAGAGGATGAAATATCTCTGACTCGATGGACATAAATTTGAACAAACTCCGGGAGATAGCGGAGGACAAGGGAGACCGGCCAGCTACAGTCCATAGGGTCGCCAAGAGTCGGACAAGATGTAGCGAATGAACAGCAACACAACAAGCCTTAACATTCGAGACATTTACCCTTCTGACGAGAGTCCTTGCTAAGGACACCCCGTTAACATCAAGCCCAGACACGACAAAAAGTACACCTCGAGCCAGCCAGGAGTCGAACCTAGAATCTTCTGATCCGTAGTCAGACGCGTTATCCATTGCGCCACTGGCCCTGTACAAGTTAGCCTTGCACTGGAGCGCAGATCACGCCTTACGCACCTAACGACAGGCTCCACGACATTAGCGCTGCATTTCCGACGCTCGGCCGGGCTCTGCGTGATTCGGGTCTGCAAGCTCCCAAGGCTCCGCCTCTCCCAGCCAACGCGCTCAGCCAATCCTCAGCCGCTACGTCACCGCGCTCTTCCTCGCCCTCACACGGCGTCGCGTCGGAATGTGCGCCTGTGGCGCTCAGTGCCCGCGCACGAAGTTTGTCCAGCGCCGCGTCCCGTTTTCTCTCTCAGCCTGGCGGGGCGGGGCGGTGGGAAGAGGCTGGGACCTGCGGCCGCTGTAGGAGGGTGACCGGTATCGCTGGAGCCGAGGTGGCGCGGGGCGGCGCGGTCGGAAACCTAGGAGGGAGGCTGTGGTGCAGGATGGCGGCCACGACCTACGAGCGGCTGAAGCTGCATGTCACCCCTGAAAAATTTTATGTGGAAGCTTGTGATGACGGAGCAGATGATGTACTTATCATCGACCGCGTGTCCACAGAAGTTACGCTCTCAGTCAAGAAAGATATTCCTCCTTCAGCGGTTACGAGACCAATATTTGGTATACTGGGCACAATCCATCTGGTGGCAGGTAATTACCTAATTGTCATTACCAAAAAGAAAAAAATAGGTGAATTTTTCAATCATGTAATCTGGAAAGCAACAGATTTTGATGTCCTTTCTTATAAGAAGACGATGTTGCACTTAACTGATATTCAGTTACAAGATAATAAAACTTTCCTAGCAATGATGAACCATGTCTTGAGTATGGATGGGTTTTACTTTTCAACAACATATGATTTGACCCATACTTTGCAGCGGCTCTCCAACACTAGTCCAGAATTCCAGGAAATGAGTCTCTTGGAAAGGGCAGATCAGCGGTTTGTATGGAATGGTCATCTTCTCCGAGAACTTTCTGCTCAGCCAGAGGTCCATCGGTTTGCCCTTCCGGTATTACATGGCTTTATTACCATGCACTCATGTTCTATTAATGGAAAATACTTTGATTGGATTCTCATCTCGAGGAGGAGTTGTTTCAGAGCTGGTGTGCGCTATTATGTGAGAGGAATTGACTCCGAAGGCCATGCAGCTAACTTTGTAGAAACAGAACAAATTGTGCATTACAATGGGAGCAGGGCTTCATTTGTACAGACTCGAGGATCAATACCACTTTACTGGTCTCAAAGACCAAACCTCAAGTACAAACCATTGCCACTGATCAACAAAGTAGCAAATCATATGGATGGTTTCCAAAGGCATTTTGATTCACAAATAATTATTTATGGAAAACAAGTCATAATCAATCTGGTAAATCAGAAGGGCTCAGAGAAGCCGCTTGAACAGGCGTTTGCAACAATGGTGTCTTCCTTGGGGAACGGAATGATCAGTTATTTTCTAGTAGACCCAGCCGGCGTGGTGCTGAGTACCCAGGAGGGCGTGTTCCGCAGCAACTGCATGGACTGTCTGGACCGAACCAATGTGATCCAGAGTCTGCTGGCTCGCCGTTCACTTCAGGCCCAGCTTCAGAGACTAGGAGTTTTGCACGTGGGACAAAAGCTCGAAGAACAAGATGAATTTGAGAAGATTTACAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAACAGTACGCGGGAACCGGCGCCTTGAAGACGGACTTTACCAGAACTGGGAAGAGAACTCAGTTGGGACTTATAATGGATGGCTGGAACTCACTAATACGGTATTACAAGAACAACTTTTCTGATGGATTTAGACAAGATTCCATAGACTTATTTCTTGGGAACTATTCAGTGGATGAATTAGAATCTCATAGTCCTTTAAGTGTTCCAAGAGATCTGAAATTCCTGGCTCTGCCTATCATCATGGTTGTTGCCTTTTCCATGTGCATTATCTGTTTGCTGATGGCTGGTGACACCTGGACAGAAACACTGGCCTATGTGCTCTTCTGGGGAGTCGCAAGCATCGGAACATTTTTTATTATTCTTTACAATGGCAAAGACTTTGTTGATGCTCCCAGATTGGTCCAAAAAGAAAAGATAGACTGAATTTGTGTCTGTGGAAAGCGGCTTGGCCTGGAAGATTCCATTATGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACGGCAGCCGAGGTCTTTGTAAATCGTTTATCCAGGAACACATCTTGTGCTGGGTGTGGGGTGATGACTTAGAGTTGATCTGGTGTTAACTGCCTTGATGATCTCTTTACTGTTGGGATAGTTATATTTACAATTTGAAGCTAGTCTATAATTAAAATGTAACCTGAATTCAGCTCACAGAATGGAAGGAACCTATACATCGTCAGTTGAATCAGCCATTGCAGAATGAGTAATATATTTAAAAAATCTAGCTTCTTCCCTCATTTGAAACAGTGAAATTATTTTTGTAGCTCAGTTTATGGTCACTGTAAAAGCAGTTGCTATTAGCAGGCTTACTTTTCCATATACCTTTGGACTTTTCTTAACAGCTTAATGATAAGCTAACTAGTCTGTTCATAACATGTAAATCTACATAGATCAGGTAGTTGGACGAAATCGTCCATGACTACATAGCAGGAAGGAGGTGTTCCTCTCGAGTTCTAGTTGGACCGCCTTACGAGTTCAGTCAGTTTGAACTGTGCAGTTTAAGTGTGATGAGAAAAGTTTCAGATGTACTCTATCTTTTTTAAAAGGTGTAAATGAAATCAGCGAATGTAAAGTCTATTCCTCATGCTAGAGGTCCAAAGCCGCCTCGGTCTTCAGGATTGCCCTGGTGTGGGAGCAGCCGCGGTTGGTCAGCCCCTCCCTCCTGGCCCCTGTTCTTTCCTGGGTCTTTCTTCAAGACATGCAGGTCCCTGAGCGCGTCTCATGCCGAGTTCTGTGTTGCCCTTGGAGGCAGCAGCTGCTTGTGCACACACGGCAGTGTTGGCGCTTTTCACTCTGTGATTATTTTTGTTGCATCAGTAAGTGTGTCTGAAATTCAGTGCTTCCAGGTAGTCATCGCTCTCCAGATCAAGGACCAACTGACAGCTTTAATTTATGTGCAGAAATAAACCTGAAAAATACGCTTTAGAAGCTGTGCATAGTTCTAATTAATAAGTCGGAAACTGTATATTGAAATTGTAATTATGAGGTTTAAAAACTAGGAAGTATCTAAGATAGTGTAATTGCCATTATTTTATAATAGTTCGATTAAATACCGCTGCAATATTTGTGTTGTGGTTGAAAATTATGTACAGTTTTTTTTTTCCAATGGTAATACCTTTTGTTGTCCTTAAATATCTCTAAAAAGCGCCTTGATTTTAACATCACCTTTTTTCCCAACATTATCATTTATAAACATTAATAAGAGTTGTTGCTTTTAGAAACTCTAAAGGAAATAATAGCTGGAAAACCCTCTGTAGCTTACAGTCAGTCATTAACACTCACAATAGGGTAAGTAATTAGAACTGCCTACTCTTAACTTGTAAATAAGCATCATTTGTTCCAAAGAGAAAATATCAAAACTCGGTTTATGTCTACTGTGATGGATCGTCAGATGCTGCTGGGCATTTCACATTAAGAACTTATTTCAACAACCATGACAAAGACCAAATCTGAATGCTAATGTGGCTGTTTTGCAGTGAATGGGCTAATGTTGGTGTGTTAGACCTTGAGGTGTCAATATTTCAGAAACCTGCAGTAATTTTATTCCTAAATTTATGTACTGTCTCATCTGTAAGTGAAAATAAAATGACATATTCTTTTCTAACTAAT EMBV3_11487 AGGGACCTCAAAGCCAGAAACGCAGCCAAGAGACATGCATCAGATTCTGGATGCCTATGA Variant GeneID:281576|WARS:NM_174218:121_cdna 171^493 2 EMBV3_16919 GeneID:281576 21 GENE WARS NULL tryptophanyl-tRNA synthetase EMBV3_27921 AGGTTCCAAAATAGGTTCCAGTAACAGCACTTCCCCCACTGTACCGTTGAAACCACCTCC Gene GeneID:517489|INTS12:NM_001075753:47_cdna Constitutive 0 NULL GeneID:517489 6 GENE INTS12 NULL integrator complex subunit 12 EMBV3_20631 TCAGGGAGTGTCCCAGCCATAACGCCCTGTGTTGATGCCAGCAGTTGTATTAGCTGTAGT Gene GeneID:617425|MGC148293:NM_001082462:8_cdna UTR3_Alt 2 NULL GeneID:617425 7 GENE MGC148293 NULL similar to phospholipase inhibitor EMBV3_00565 CATGGTGTTAGAGGTCCAGAGGTACCCGTTGTATACCAAAATCACAGTGGACATCGGGAC Gene GeneID:281781|B4GALT1:NM_177512:2_cdna Constitutive 0 NULL GeneID:281781 8 GENE B4GALT1 GGTB2 MGC143191 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 EMBV3_16216 TCTGGTGTTGGCATATATCATCATGGTGCTCATGGGCGTCTGGGCCTTCTTTGTTTCTGG Gene GeneID:530913|APH1B:XM_002690842:173_cdna Constitutive 0 NULL GeneID:530913 10 GENE APH1B NULL anterior pharynx defective 1 homolog B (C. elegans) EMBV3_37265 CTCGACTGCCAGGAGAGATTCGCATTACTGGATTCTGCTCTAATACTTGATGTTCCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07274 CCAAAAGTGTCCTGAGTCTTATCATTCATTTCTCCGCTCCCCCCTCACCACCTCCAGCTT Gene GeneID:514618|RACGAP1:XM_002687278:158_cdna Constitutive 1 NULL GeneID:514618 5 GENE RACGAP1 NULL Rac GTPase activating protein 1 EMBV3_16424 CATAGAAGCCGAAGTGTTGAGCCATGCAAAAGTAGCTGGGTGTTAGTCTCCTTGTCCTAA Gene BVV0101_031385 - 0 NULL GK000019.2:12573534-12602211 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095185 TCONS_00095189 TCONS_00095187 TCONS_00095188 TCONS_00095186 1 XLOC_057659 Coding TCONS_00095189 XLOC_057659 Coding Coding PPM1D 19:12601550-12662410 = TSS71044 2969 1 TCONS_00095189_3 605 6 0.951313692305164 0.00492470954252208 0.00505599081423885 0.00599296827767725 0.00181131345106685 0.00190867047706724 0.00128526527783869 0.0012575202304479 0.00316004643158275 0.00155222480092258 0.000546805184412054 0.00100866313820418 0.000177862195712306 0.00027641968749063 0.00150887074799792 0.000242265826974388 0.00381503050885122 0.00244924270409129 0.00617061457974928 0.00460697279751226 0.00478934777341437 0.00156967094572453 0.000640715881870491 0.00166498065605207 0.00131258638233752 0.00577086530545799 0.006968169291414 0.00308199100753517 0.00111250549087866 0.000674189234346415 0.00098155254993323 NM_001191444.1 PPM1D Bos taurus protein phosphatase, Mg2+/Mn2+ dependent, 1D (PPM1D), 0.0 5355 100.00 0.999663186257999 NM_003620.3 PPM1D Homo sapiens protein phosphatase, Mg2+/Mn2+ dependent, 1D (PPM1D), 0.0 3622 86.95 0.999326372515999 TCONS_00095189_3 sp|O15297|PPM1D_HUMAN PPM1D_HUMAN Protein phosphatase 1D; 0.0 1152 91.90 0.998347107438017 1 coding 0 1 0 1 -0.139339008886121 0.343587442463686 0.0290614045695544 0.583674405408266 TGCGCAGGCGCAGCGGCTGGTCTCTGTCCGCCCCCGGCTTTCGGGCCCAGCTCTCGCGGACAAGTCCCGACATCGCGCGCGCCCCCCATACCTCCACCCTCCGGGACCGCCCCCTCCTCCGGCTCGGCCTCGTCGGAGATAAACAATAGTTGGCTGGCGAGCGCCGAGGGTGCCTCCCGCCGCGGGGACTCGGCGGGCCGCGCGGGACCGGCGGGATCGCGGCCAGCCGGCCATGGCGGGGCTGTACTCGCTGGGAGTGAGCGTCTTCTCCGACCAGGGCGGGAGGAAGTACATGGAGGACGTTACTCAGATCGTTGTGGAGCCCGAGCCGGCGGCCGAGGAAGAGCTCTCGTCGCGGCGATCGCCCTCGCGCCCGCCGCCTCCGCCGCGGTCACCGCCGCCCCCGGCCGGCGGCGAAGTGGCGGGGAGAGGCGCCGCGGGGGCCGCCCGGGAGGCTCGCGCCGCGCCGCCCGACGCCGGGGCCTCGCCGGCTCCCGGCCGCTGCTGCCGCCGCCGCTCCTCGGTGGCCTTCTTCGCCGTGTGCGACGGGCACGGCGGGCGGGAGGCGGCGCAGTTCGCCCGCGAGCACCTGTGGGGTTTCATTAAGAAGCAGAGGGGCTTCACGTCGTCCGAGCCGGCGAAGGTGTGCGCCGCCATCCGCAAAGGCTTCCTCGCCTGTCATCTCGCCATGTGGAAGAAGCTGGCAGAATGGCCAAAGACTATGACAGGTCTTCCCAGCACGTCAGGGACAACTGCCAGCGTGGTCATCATCCGAGGCTTGAAGATGTATGTTGCTCACGTGGGCGACTCAGGGGTGGTTCTTGGAATTCAGGATGACCCCAAGGATGATTTTATCCGAGCTGTGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAGGAAAGAGAACGAATTGAAGGACTTGGTGGGAGTGTGATGAACAAGTCTGGGGTGAACCGTGTGGTTTGGAAACGGCCTCGGCTCACTCACAATGGACCTGTGAGGAGGAGCACAGTCATTGACCAGATTCCCTTTCTGGCAGTAGCCAGAGCACTTGGTGATTTGTGGAGCTATGATTTCTTCAGTGGCGAGTTTGTGGTGTCACCTGAACCAGACACAAGCGTCCACACTCTTGACCCCCAGAAGCACAAGTATATTATCTTGGGAAGTGATGGGCTTTGGAATATGATCCCACCTCAAGACGCCATCTCCATGTGCCAGGACCAAGAGGAGAAAAAATACCTGATGGGTGAGCATGGACAGTCTTGTGCCAAAATGCTTGTGAATCGAGCCCTAGGCCGCTGGAGGCAGCGAATGCTTCGAGCAGATAATACTAGTGCCATAGTAATCTGCATCTCTCCGGGAGTGGACAGTCAGGGACATTTCACCAGTGAAGATGAGCTCTATCTGAACCTGACTGATAGCCCTTCCTATAACAGTCAAGAAACCTGCGTGATGACTCCTTCTCCGTGTTCTACACCACCAGTCAAGCCCCTGGAGGAGGACCCATGGCCAAGGCTGAACTCCAAGGACCATATACCTGCCCTTATCCGTAGTAATGCCTTCTCAGAGAATTATTTAGAAGTCCCACCTGAGATAGCTCGAGGGAATGTCCAGGCTGCAGTCATATCCTCAAAAGATCCAGAGCCACTAGAAGAAAATTGCACTAAAGCCCTGACTTTAAGGATACACGATTCTTTGAATAATAGCCTGTCCGTTGGCCTGGTGCCTACCAATTCAACAAACACCATCACGGACCAAAAAAATGTGAAGATATCGAGCCCGGGTCAAATGAAAGCCCAGGAAGTTGAAAGAACCCCTCCGGCAAACTTCAAAAGGACATTGGAAGAATCCAACTCCGGCCCTCTAATGAAGAAGCACAGGCGGAATGGTTTAAGTCGTAGTAGTGGTGCTCAGCCTGCAAGCCTCCCCACAACCTCCCAGCGCAAGAACTCTGTTAAACTTACCGTGCGACGCAGACTCAGGGGCCAGAAGAAAATTGGAAATCCTTTACTTCACCAGCACAGAAAAACTGTTTGTGTTTGCTGAAATACGTCTGGAAATTTTTTCCAAACTTCTTAAGAGGGCTCTTTTGAATTTGGTGCCGAAGTTGAACTTTTTTTAAGGGGACAAAATAAAAATAGTATGAATTTGACTTTTTGGAATTCAACAATTTTAGCCTGGCCTTGTACTTGCTTGTATTATAAATGTGAATTTTGTAGATGTTAGGGTGTAAGTTGCTGTAAAATGTGTGTAAATTTGTATCCTTCACACAAACTCAGTCTGTTACTCTGATACACAGTAAATGTAACAACAGGGCTAAAGGTTTAAAAAAAAAAAGAATCTATTAGATTTTAGAAATACATTAAAACTTTTAAAAATGCTTATTAAGAAATTTGTATGTCACTTGTGATGAAAACTACACAACTTTTTAAAGTAAATTATTAAGCAAACTGGAAAAGTGATGTATTTTCATAGTGACCTGTGTCCCACTTAATGTTTCTTAGAGACAGCTAGTGTCTTTTTTAAATTATTTTTTATTTCTAATTTCATAATCCAGAACTAAATTTTTCATAGAAGCCGAAGTGTTGAGCCATGCAAAAGTAGCTGGGTGTTAGTCTCCTTGTCCTAATTAAAATACTATGCAGTATCTCTTATTTCATTCAGTAGCATTTTTTCTAAAACATTAACCATCATATTTGCTCACCAGATCTTTGAAGTAGAAGGAGGTATGTTTGCCTAAAGAGATGCCCTTTTCAATCATCCCAGACATTCAGTGGCATTAATAAGTCTTAAAGTAGTTATATCCTCTTCTCGTGTTTGCATAAAATATGTGAAGTTTTTCTTGCTATTTCAATAATGGATGGTGCTGCTAATTCCCAACATTTCTTAAATTATTTTATATATCGTACAGTTTTCATTGATTATATGGATATGTTTGTTCATCTAATAAATCAGTGAACTGTTA EMBV3_19027 GCATGAGGTCATTCTTAATTTGAGCAAGGCCACCAGAAGTAAGCCCTTCCATGAACCCTC Gene BVV0102_298213 + 1 EMBV3_36017 GK000023.2:31281324-31288208 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134891 1 XLOC_081574 Coding TCONS_00134891 XLOC_081574 Coding Coding - 23:31282475-31288342 - TSS100469 5867 3 TCONS_00134891_2 166 0.313788989261974 1 0 0 0 0 0 0 0 0 0 3.36314333042548e-06 0.00011921917457586 4.96216336206142e-05 6.54148237553805e-05 1.22624217520838e-06 4.99478647199418e-05 4.11551895233419e-06 0.000871222508210033 5.37653571734356e-05 0.000105769287792081 0 0 0 0.000286141601870774 0.000270514272342282 0.000537764635024381 0 0 0 0.000104746437906136 7.83440205802388e-05 4.61955881836646e-05 XR_229807.1 LOC101907467 PREDICTED: Bos taurus uncharacterized LOC101907467 (LOC101907467), 0.0 675 72.13 0.214419635247997 XM_005248444.1 TMEM161B PREDICTED: Homo sapiens transmembrane protein 161B (TMEM161B), 2e-07 64.4 66.27 0.0420998806885972 TCONS_00134891_8 sp|P10400|POL1_MOUSE POL1_MOUSE Retrovirus-related Pol polyprotein; 3e-11 58.2 41.56 0.5703125 1 noncoding GTCATTGGAAAAATGAATGCCCCAGAATAGCTGGGAAAAATAACTGGCATTGGCTGTTTTCGGGCTGGCTGAACTGGAAGCTGAATAGGGGTGCCGGGGCTCAAAGACACAAGGTCCCCAAGAGCCCATGGTAAAACTAAAAGTGGAGGACCAAATTATTGACTTTATGGTGAATACTGGAGCAGAAATGTCAGTGGTGACTGAACAGGTGGCTCCCCAGAGAAGGTCACTGCTGTAGGAGTAACCAGGGAAAAGCTGACTAACCATTCTGTCTACCCCAAAAATGCCAGATTGGGGTGGGGGGCATCAAGTGACTTATGAATTCTTGTATATTCCTGAATGCCCAGTACCTCTGTTGTAGAGAGACTTGTTGTCTAAGTTGGGGCCACAAGTGACCTTTCCCCCCAAGAAAGACCCACTCTCCAGTGGGCTCGACCACCTATTTACTCTCCCTCTCGGTAACCCCTCAAGATGAATGGAGGTTGCATGATCTTTCAGAAGGGAAACCTGATGGGTTAAACAATCGAGAGAGAGCGAGAGCTAATCCAACAATTCCCTGAGGTTTGGGCGAAAGATATCCACCCTCCCCCTCCCCTCCCCCCTGCCCCCGCCCGGGCTCGCCAAACATTAAGCTCCAGTGGTAAGAGAACTCAAACCTGGTGCCATACCAGTCAGGAAATGTCAGTACCAGTTACCGCTGGAGGCACGAATTGGTATCTTTCCACATATAAATACGCTACAGCAGGTGGGCATCATGATTGAATGCCAGTCAGCCTGGAACACACTGATCTTGCCAGTTAAGAAGGAAGGGGGACAGGACTACAGGCCTGTACAGGACCTCACACAGGTCAACCAAACAGCGATAACTCTACACTCCACTGTTGCTAACCCATATACCTTACTCAGTCTCCTCCCACCGAGTGCTAAGACCTATACTTGCCTGTATCTAAAATACACATTCTTTTGTATCCACATTGCTCCGGTACCTGAACCCACTTTTGTCTTTGAATGGGAAGATCCAGCAGGGAGCACCAAACAACAGCTCACTTGGACTTGCCTCCCACAAGGATTTAAGAATTCCTCGATCATTTTTGGGGAAGCCTTGGCTTCTGATCTGGATTCATTCCAGCCAGGAAGGTTTAGATACTGGTTGCTACAATACATGGATGATCTGCTGTTGGCTGCAGAGAATAAAGAACACTGCTGGGAAGGAACTAAGGCTTTGCTAGAACCATTGATGGAGACGGGCTACTGAGTTTCGAGGAAAAAGGCACAGATCTACAAGGAGGAGGTAAGATATTTGGGGTTTGTCCTGAGATGGAGCAAAAGACTGTTGGACCAATCCAGAAACGAAGTAATCTTGAGAATCCCATGACCAAAAACCTGACGATAGGTCTGAGAATTTGGGGGAGCCACTGGGTTCTGTAGAATTTGGATCCCAGGATACTCTCAGATGGACCAACCGTTATATGAACTCCTAACAGGGCCAGAAGGGAATTCACGAAATTGGACTGAGAGGCAGCAACAGGCCTTTGAAAAGCTAAAATTGGCAATTACATCGGCACCTGCATTGGGTCTGCCAGAACTTACTAAACCATTCACTCTTTATGTGACTGAAAAAGACAAAGTGGCTATGGGGGTATTAACCCAGGCTATGGGGACGTGGGATAGACCAATGGCCTATCTCTCAAAACGGCTGTACAACATTGCCACCGGGTGGCCCGGGTGCTTTCGAGTGATTGCCGTGGTTGCCTTACTGGTCCGAGAAGCATCCAAGCTAACTTTGGGCCAAAACTTAATTGTAAAGGTCCACCATGAGGTCAATGCTCTCCTATGAGGAGACCCCACAAATGGTTGTCAACGTAGCAGATTACCCAATATCAGGGACTTTTATGTGAGAACCCCCATGTTACTATTGAGCTCTGTCAGACCTTAAATCTGGCTACATTCCTTCCTATGGGGGAAGGCGGACCCTCACATAATTGTGAAGAAATCCTGGAAGAAGTTTATGCTAGCAGACCTGACCTGAGAGACTAGCCAATCCTGGACTCACATTGGGTCCTGTACACTGATGGCACCAGCCTGGTGAAACAAGGACAATGGCTATCGGGGTATGTGGTAGTCACAGAAAAGAGCATCGTCGAGACTGGTTCTCTGCTATCTCACTGGTCTGCTCAACGGACTGAATTATGGGCTCTCATTCGGGCCCTCCAGTTGTCAAAAGGTAAGAAGACCAACGTTTACACTGACTCCAGGTATGCTTTTGCTACTTTGCAATATACATGGGGCCCTATACAAGGAGAAAGGGCTCTTAACAGCTAACAGTAAAGACATCAAAAACAAGGAAGAGATCTTGACCCTACTAGATGCTGTATGGGAACCTGAAAAAGTAGCAATAATATATTGCTGGGCTCACCAAAAAGAGGGCACCCTGCAGGCGGGGGGAAATCGACAGGCAGATGGAGCCACAAAATAAGCCGCTGAAGAATTTGGAGTCACTGGGGTGGGATTGTTAAGGCTTTTGTGCTCTTGAGAATGCCCAAGTTAACTTCAACTGTCCCACAGTATACCCCGGCCCAAGACCAGCTGGCTGAGATAGAAAGGGCCACCAAGAATGAAAAGGGCTGATGGGAACTGCTGGATGGCAGGTTGCTAGTTCCTGAAATATTGGCCTCTTCATTAGTGTCTCAGTACCCTAGGCTACTCACTTGGGATGTGACAAAATGGAAGAATTAATTTGGAAATATTTTTTAATACCACGGCTTTCTTCCTTGTGTAAAATGGAATCCCAGAACTGTTCTGCTTGCTCAGAGGTCAATGCTACCCCCGGACATAAGCAGAAATCTCTGGGAATACAATTAAAGGGTACTCTGCCCTTTGAACATTTAGAAGTGGACTTAACTTAAATGAAACCCTACTGGTATTATCATTATTTACAAGTCGTGGTACGTACCTTTTCAGGTTGGGTGGAGGCATTCCCCACCTGAACTGAAAAAGCAAATGAAGTGGCTCATTGTCTGATTCAAGAAATAATCCCCAGATTTGGGTTCTCAACCAGTATAGGCTCAGACAATGGTCTTGCTTTTGTAGCCAATTTAATTCAACAACTATGTAAACCTCTAAATGTCAAATGGAAATTACATACAGCATATAGACCCCAGAGTTCCAGAATGGTGGAAAGAACTAACCAAACCCTAAAAGATACACTTTCAAAATGGATCATAAAGACTGAGGGTTCATGGATGGACTTACTTCTGGTGGCCTTGCTCAAATTAAGAATGACCTCATGTTCCCATGGTTATTCTCCTTATGAAACTGTCTATGGAAGACCCCCTCCCATAGTAAGACAGGTGTTGGCAAATTTGCCATGTAAGAGGGGGATGGGATTTCACAGAGGATGGAAAAATGAGGTAAAGTGATAAACCAGGTAACTAAGTTTGTCCAAGAATGGATGTCATTCCCCCTTGGGGAGCAGATTCATGAATTTGTGCCCGGTGATCAAGTGTGGGTCAAGGACTGGAAGCATGACTCCTTGGCCCCACATTGGAAAGATCCATATACTGTTGTACTAACTACACCTAAGGCAGTTAAAGTTGCAGGTGTCACTCCCTGGATCCATCACACGAGGGTGAAGAGGACATACCACACAGACCTGGAGGATGCCGAGTGGACTATACAAAAGGACCTCGCTGATCTCCGTGAAACCAAGATCATCTTAAAAAGAAAAAATGAAGCTCCGCAATCAACTCCTACTACACGGACTTTCTGGTATCCTGGGACTAACCCTAATTTCAGCATAAGACAACATTTTCATCTCATGGGCACATTCCTATGCTGACTTCCACAATAGATCTAACTGCTGGGTATGTGGAGCTATGCCCATGTCCATCATGGATGGACTCCCATGGTGGGTGTCACCTCTACGAAGGGGTGACATGCCTAGTTTATGTGACTATTTTCTTCAGATGAAACAACAAAAGTCGAATGTGGAAACTGTCATTACAGCAGCCACTACCCATTGGTTTGATAAAAAGGCTGATGATCTGACAAAAGGCCACAGGATACATTTTAATTGTATTCTTAGCTCAGAAAATGCTTATCAATATTATGTGATAGCCAATGCCCAAACAATTAAAAAAAAAACAGGTATTTTGACCAATTTTACCAGATATGAAATGAATCTATGTAGATTACTCCAGAAAAGGGACAACTTGTTATGATAGCTGACATTTGCTGGGAACAGGCTGTACACACTACTGGATATAATAACCAGACAATAGACAAAAAGGACTTGAAGCCAATGGGCTTTCTACGGACAGAACAGTGTTATAAGACCTATAAAATTACTTATGATCCAAATCAATCCACCCAATGGCCTGGGACGGACTAGGGAGTCAACCCCGGAATCAGGTGGATTGCTCCAAACAGCACTCATTGGTTATGCAGGACCAATCTGTGGCCATGGGTACCTAAGTGTGGGTAGGAAGATGTACTTTAGGTCTGGCCTTTGCCCATGGGAACATTAGGCCAACAATACAGGACCCCATAAATGTACCCTCCCTACGGGCCAGATGGTCACGATCAGTTTTCCATTGGTATGATTATTTGACTGCTACATTTGTTCCTTCGTTGGGCACTACAGGTACAATGATTAGAGTTGAAGCCCTAACTAATTTCACCCAAAGGGCCCTAAATGACAGCCTGAGGGCAATTCAAGCATTAAATACTGAACAAATACAAATGAGAAAGGCAGTAATTCAAAATAGAATGGCTTTGGACATCTTGACCGCTGCTCAAGGAGAGACTTGTGCCATAATAAAGGTTGAGTGGTGTGTGTATATCCCAGTCTTGTCTGGAAACGTTACTGAAGCTCTCAGAGATACACAAGCTCATGTAAAACAAATGTCAGATGACTCAGTACCTTTTCTGTTTTTTCATGGATAAAGGGGGATTGGCGAACTGTCAATTGTTGTTACAGTTGCTCTGTTAATTTTGTTATGTGGACCTTGTATTCTCCAGTATATTGTCCAATTTGTGTCGCTGATATTGACTACATTTACCCAAGTACATGCCAAAAGACCTAATGTGCAATATGTCCCTATAAGTGATATTCACGTTAGAAGCTAAGAGCATCAAGAGAGGGGAATGAAAGACTAAAGGAGCAGGTTGCCTTGACTGGACTGACTTCATTTTTAAAAGAAAAGGAACTCCATCTTACACTCTCAGCAAACTTTTGGACTGTATATCTGGGAGGCCATGGAGATAAAATACCAGCGGCTGAACAGGTCTCCGGGATGGATAAAAACCAGACCAGGCAGACCCTGTACCTAGACCTCCCGGAGCCAGAAGGAATGCAATGCCCACTATGTAATCAATCACTATCTTCTGAAATCTTAATAATACCTATTGATGTGGGGTAAACTGTATGTCCAGATAGCTTTAGAATGTGAATTTATGGCTAAAACCTGATTATCTCTTACTAACATTGTCCAGAGTGGGTTTTAAAGAATTTGCAGATGTGGGCTTGGGCACATACACCTTGGGCATAAAAGGTTGTCACAAAAATTGGTTGGTAACCCTGGCTAAAGAGGAAACTCTGCCTCAGACCCGCTGGTATAATAAACTGCACTCCACTCCTTCATGCTGTCCTTCTGAGTGAGTTTGCTTTCTGGAGTGTTTGGCTACAACAGAGGGAAAATTAGTTTGTGATCTAACAGCCAATCTGTTGTTGGGGAGGGGGAAATTTCCCCTTCTCCTCTTGAGTACCTGTGGTTGCAAGATGTTAACAGGAGAAAAAGAAAGAAATTTTAATTCATGAACATGGAGGTCCCATGGAAATGGGACCTAAGAAGTGGCCAAATCAGGCA TCONS_00134887 TCONS_00134888 s 5' 1101 TCONS_00134887 TCONS_00134888 s 5' 6967 EMBV3_03123 ACAGCGGGGCCTGGCATCCAAAGCAGCTGAGCTGGTGGAGCGGACCGTCAAAGAGGTGCT Variant GeneID:404138|PFDN2:NM_001080221:215_cdna 149^241 1 EMBV3_07786 GeneID:404138 3 GENE PFDN2 NULL prefoldin subunit 2 EMBV3_15639 TCTGGGTCCCAATCTGGATCAGCTTCACCTCTCCCAGTCAGCTCCTCTGCTTCCTCCTCT Gene BVT0102_353898 - 1 EMBV3_33400 GK000017.2:71457054-71459353 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29218 AGCTTCACATTCAGCCTCCCGTTCTGCAGCTCCAACCACATCGACCACTTCTTCTGTGAT Gene GeneID:523582|LOC523582:XM_002707857:111_cdna Constitutive 0 NULL GeneID:523582 3 GENE LOC523582 NULL similar to olfactory receptor Olr1346 EMBV3_01763 TCTGAGACGGACACCAGGTATTTTGATGAGGAGTTCACGGCCCAGATGATCACCATTACG Gene GeneID:280991|AKT1:NM_173986:109_cdna Constitutive 0 NULL GeneID:280991 21 GENE AKT1 NULL v-akt murine thymoma viral oncogene homolog 1 EMBV3_23039 CTGTCAAACCAAAGGGAAGGACAAATTAAGGAAATCCTGTGGAAAGAAGCATGGCGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39175 CCAGGCCCCTCCATCCATGGGACTCTCCAGATGAATTGTACGAGAATCATTTGCATCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16616 GAGGAGCACGAGGATCGTGGGAGCTAAGAAATATCCTTCTTTCCAGAGTCAGGACAGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38321 TTAAACCAGGTATCTTGCATGGCCCACCGAGGAGAAGTCCCTGCCATGTTGCCTCTGAAA Gene GeneID:616632|TMEM223:NM_001099721:121_cdna Constitutive 0 NULL GeneID:616632 29 GENE TMEM223 NULL transmembrane protein 223 EMBV3_36638 CTAAGTGGTTTGGCTAACTCCTTGCTTCAGTCATCCCTCACCATCCAGCTGCCACTTTGT Gene GeneID:784681|LOC784681:XM_002697439:25_cdna Constitutive 0 NULL GeneID:784681 23 GENE LOC784681 NULL similar to olfactory receptor MOR256-14 EMBV3_13155 TGGTTAAGAGTCTGCCAACCAATGCTGGGGACATGGGTCTGATCCACTTGGTGCCAGACA Gene GeneID:617702|LOC617702:XM_002707893:40_cdna Constitutive 0 NULL GeneID:617702 18 GENE LOC617702 NULL similar to immunoglobulin-like transcript 5 protein EMBV3_04117 TCCGGGCATCTTTCAACCACTTTGACCGGAAGCGGAATGGCATGATGGAGCCTGATGACT Gene GeneID:539375|ACTN3:NM_001076157:77_cdna Constitutive 0 NULL GeneID:539375 29 GENE ACTN3 MGC140041 actinin, alpha 3 EMBV3_02044 GCAAGTGAGGATGAGAAAGGCTTGTGTTAACTTGGTGAAGAGGAAGGGCCAGCTTTGTGG Gene GeneID:282010|PSEN2:NM_174440:5_cdna Constitutive 1 NULL GeneID:282010 16 GENE PSEN2 MGC137335 presenilin 2 (Alzheimer disease 4) EMBV3_10223 CCTTATTCAAGAGCAACTTCTTTTGCCTACTGAGGGAGCAACACTAACCCACATGCGGAG Gene GeneID:533156|DAPP1:NM_001076891:14_cdna UTR3_Alt 2 NULL GeneID:533156 6 GENE DAPP1 MGC142363 dual adaptor of phosphotyrosine and 3-phosphoinositides EMBV3_11845 AAAAACGTGCTGGGGCGCAATTTCAAGATGGATCGGGACCTGCCCTCCTTCACCCAGAAT Gene GeneID:510797|XPO6:XM_002698080:83_cdna Constitutive 0 NULL GeneID:510797 25 GENE XPO6 NULL exportin 6 EMBV3_20466 GGGGCCACCGACCGTTTTGTTGCTTGGATTTCCCTCAGATTTCTCTATTTGTAGGAGAGG Gene GeneID:534649|TBC1D4:XM_002691891:13_cdna Constitutive 0 NULL GeneID:534649 12 GENE TBC1D4 NULL TBC1 domain family, member 4 EMBV3_31263 ATTCCGGCCAAGATGTTCATGTAGTGTTGAAGCTCTCCAGCACAGCAGGCAGAAAATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33951 TCAGCAGGATGTAATTGCCCTTGTGTCTAGTTGAAATGAGTCATCATCTGGTCCTGTGTG Gene GeneID:281995|PPM1B:NM_174430:30_cdna Constitutive 0 NULL GeneID:281995 11 GENE PPM1B MGC134549 protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform EMBV3_32221 AAGAAATCCACTGATGCCTATGAGCTGAGTGTCGCCAACAGGCTCTACGGAGAAAAGGAG Gene GeneID:511695|LOC511695:XM_002683996:2_cdna Constitutive 0 NULL GeneID:511695 Un GENE LOC511695 NULL similar to serpin peptidase inhibitor, clade B like EMBV3_07570 TGCAGCTGACTATTGTAGATCTGGAAAGGGACCCATACTGATGGAGCTGCTGACATACCG Gene GeneID:768012|PDHA2:NM_001077071:11_cdna Constitutive 0 NULL GeneID:768012 6 GENE PDHA2 MGC133847 pyruvate dehydrogenase (lipoamide) alpha 2 EMBV3_28788 GAGCACGAAGTCTGCTTCTTTGCACAACTGGCCTTCACATGGGCCTTTAGAGAAAAACAG Gene GeneID:534058|C25H16ORF62:NM_001046368:362_cdna Constitutive 0 NULL GeneID:534058 25 GENE C25H16ORF62 MGC128449 chromosome 16 open reading frame 62 ortholog EMBV3_34882 CCTCCAAAGAATTTGCTGCCAGGTAAGCCACAGGTCCAAAGAGAAAGGCTCCAAATATCC Gene BVV0102_198140 + 0 NULL GK000019.2:20927188-20964784 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34639 TCCAGATCGCCCTTTTAGTTTGTGCCATGTGGCTATAGTATGATTGTGTTCTGAGGCAAG Gene BVT0102_169972 + 0 NULL GK000011.2:15681037-16087065 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16069 GCTCAACAATGTTCTAGACTCTGGGGATACAGCAGTAAACAAAGACCTGTGCCTTTATGG Gene BVV0101_005343 - 1 EMBV3_01041 GK000021.2:68911836-69009822 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33266 TCTTTTCCATGTGTGTGCCAAGGCAGGGTTGCTTGTATCCCTATTCCCTTTCAACAGCTG Gene BVT0102_404481 + 1 EMBV3_28338 GK000021.2:54751241-55015474 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13988 AAAATGAAAGTGAGCCCGAGGAACCATCTGGTGTGGAGGGTGCAGCTTTCCAGAGTAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14839 GCCACAGAGAAGCTGACTTCTGCATCAGTGCTCCCACCTGGTCTTACTCCAGCAGCTAGA Gene BVT0102_247073 - 1 EMBV3_04066 GK000028.2:24845869-24869415 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159254 TCONS_00160358 2 XLOC_097379 XLOC_097636 NonCoding TCONS_00160358 XLOC_097636 NonCoding NonCoding - 28:24851413-24852422 - TSS119939 1009 1 TCONS_00160358_7 85 0.777006937561943 1 0 5.3936264218584e-05 0.000179257489358532 0.000137571139049148 0 0 0.000127625067248952 1.90272396083987e-10 0.000146548210798109 0 0 0 0 0 0 0 0 0 0 0.00196151974058689 0.000206690855403576 2.10602180073642e-05 0 0 0 0 0 0 0 0 0 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 3e-45 187 80.45 0.209117938553023 0 noncoding 1 1 1 1 -0.0316331946456237 0.764176411338635 0.00552553025022674 0.92182345222906 AGGAAAGTAGAGCCACTGTATTAGGGAAGAAGAAATTTATTGTAAGGATGAGGCCTTACACAACTGGGGAAGGAGCTAGGGATGTAAAAGTCCAAAAAGGATTGTTGGAGGATGAGAGAACAGTCGTTAAGCAGCCTGGCTGGGCTGAATGAGTCAGAGCTTGCAAGGGAGTCTGGAAGCCAAGTGCCTCTAGCTGCTGGAGTAAGACCAGGTGGGAGCACTGATGCAGAAGTCAGCTTCTCTGTGGCCACCGTCTCTGAGTTCACGTGAAGCATCTGATTGTAGGCCTGAGGCTGCTCTTGGTCAGCAGATCAGGAGATCTTGCTGGCGATCAGGAGGGAGCACTTGATACACAATGAGGAAGAGCAAAGACAAGAGCGAGGTGCTGGAATCTACCGGTACCTTTGTGTCTATCTCTCACAGCCTTTGACCTACAGTGATCTTCAGAGCATGGTGGCTTCACTTCTGCCTCCCAAAGCTCATACAGATTCACTTTTGCCTAACTCAAACCCAGAATCACACAGGGAAAGGCATTATGAGAAACATAGCTTCCTGGCCAAGTTTAACACAGAACAGTCCAGCACATCCCTGAAACTGATTCTCTGGGTTCTGCATCTGCATCCATGAAAAGAAGCATCATGATTATTGATTTGTCTTCTCAAATACCTCAGTGCGAGGAAGGGAAGGACCTGGGGAAGTGAATGCAAATATTTTGTGTTTGTCATATCAGTCGTATCGGACTCTTTGTGACCACATGGACTGTAGCCTGCCAGGTTCCTCCGTCCATGGAATTTCTCGGGCAAGAATACTGCGTTGCCATTTCCTTCTCCAGGGCATCTTCCCAACCCAGCAATGGAATCTGAATCTCCTGCATCTCCTACATTGGCAGGTGGTGGATTCTTTATCACTGTGCCGCCACCTGGGAAGGCTGAATGCAAATATTTCAGTCACTGGAAAGGTGGAGCATCTCCTGAAAGTTAACACTTTAAAATATGTGTCTGTCAGTGAG TCONS_00160356 s 5' 5546 TCONS_00160356 s 5' 6554 EMBV3_19638 TTCAGCTGCAAGAGGAAGGCAAGCTGCACATGATGAAGGAGAAATGGTGGAGGGGCAATG Gene GeneID:615226|GRIK5:XM_002690152:2_cdna UTR3_Alt 2 NULL GeneID:615226 9 GENE GRIK5 GRIK5 glutamate receptor, ionotropic, kainate 5 EMBV3_23168 GGAGGCAGGCCTGGTTGTTTGGTATCTGTTTTGTACTTTGGAGGCCTGGAAAATGTAAGC Gene GeneID:530547|UFM1:NM_001046314:133_cdna UTR3_Alt 2 NULL GeneID:530547 12 GENE UFM1 MGC127692 ubiquitin-fold modifier 1 EMBV3_16175 AGGTCCTGTTTCCCTACCCAGAGGACAGCAGCCAGAGGAAGAACATCGAGAAGCTGCTGA Gene GeneID:506141|IRF4:XM_002697611:106_cdna Constitutive 0 NULL GeneID:506141 23 GENE IRF4 NULL similar to interferon regulatory factor 4 EMBV3_01259 TACAGACTGGCCACAAAAAGGTGCCAACCAGCCCGTGGAGAGTGACGAGAGCGTGTCTGA Gene GeneID:533953|IRAK1:NM_001040555:67_cdna Constitutive 0 NULL GeneID:533953 X GENE IRAK1 NULL interleukin-1 receptor-associated kinase 1 EMBV3_00802 CATGTATATGAAACCCAAGAGCAAGGAGGCCCGTATCTCTGACGAGGTCTTCACGGTCCT Gene GeneID:784954|LOC784954:XM_002683960:2_cdna Constitutive 0 NULL GeneID:784954 Un GENE LOC784954 NULL similar to olfactory receptor Olr834 EMBV3_05949 TCTGTGTTTTCCAAGTGTAAGATCAGCATAGCCTCCCCGTCGCCTTAAATGTCAAACCCC Gene BVT0102_035027 + 0 NULL GK000004.2:105740172-105751617 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185223 TCONS_00185221 TCONS_00185219 TCONS_00185222 TCONS_00185220 1 XLOC_111518 Coding TCONS_00185222 XLOC_111518 Coding Coding KIAA1147 4:105745863-105797722 j TSS137739 7458 1 TCONS_00185222_2 364 0.0811209439528024 9 0.856357746152956 0.00114164773776153 0.00123606711204528 0.00200545467191362 0.00145485740151269 0.000183897318956229 0.000476192207471628 0.000778944756134989 0.000811225046804653 0.000322756739528571 2.45136304316357e-21 1.64824731652642e-21 1.23128370131862e-09 3.50994584032293e-17 5.54421749870268e-21 0.000602012063027755 2.09626465462785e-08 1.12123693796911e-07 2.19071034267956e-07 0.00109854007159725 0.00236631912960482 0.00079731276416902 0.000156198926639984 1.59837197377148e-08 8.1899427222574e-10 0.00223209345992593 0.000385201276497976 0.000200779101228113 2.87191478359969e-08 2.13446845847985e-09 2.02044901665744e-09 XM_583518.5 KIAA1147 PREDICTED: Bos taurus KIAA1147 ortholog (KIAA1147), mRNA. 0.0 4933 100.00 0.366586216143738 NM_001080392.1 KIAA1147 Homo sapiens KIAA1147 (KIAA1147), mRNA. 0.0 1730 81.20 0.237463126843658 TCONS_00185222_2 sp|A4D1U4|LCHN_HUMAN LCHN_HUMAN Protein LCHN; 0.0 749 98.08 0.997252747252747 3 coding 1 1 1 1 0.620166039539003 0.0322802961137999 0.0266598655750077 0.701230503962433 AGCGCCCAAGTTCAGTCTCTCTGACGGCATTATTTTGAGGAATTAACGCCTGGAGTATTAAGGGATGGCACGGAGGGATTAAGCTGGGGACGGATTAAAAGAGAAACCTCCTCGGAAACATGGTGGAATGGTGCTTACCCCAAGATATTGACCTTGAAGGTGTGGAGTTCAAGTCTATGGCCAGCGGATCCCATAAAATTCAGTCTGATTTCATCTATTTCCGGAAGGGGCCCTTCTTCGGCCTGGCCTGCTTCGCCAACATGCCGGTGGAAAGCGAGCTGGAGCGTGGCGCCCGGATGAAGTCCGTGGGCATCCTGTCTCCATCCTACACCCTGCTGTACCGGCACATGCACTTCCTGGAGAACCAAGTTCGACATCAGCTGGAGACCCCGGGTCATTACTCTCACCTGGCTGCCTTCTATGAGGACAAGAAGGGGGTGCTCCATGCCGGTCCGGGGAGAGGTGGCAGCCTGCCCCCCGTCTACTGGCTGCCTTCCATCCACCGATACATGTACCCCGAGATGAAGATCACACACCCAGCTGGCTGCATGTCTCAATTTATTAAGTTCTTTGGCGAACAGATCCTCATCCTTTGGAAATTTGCCTTACTTCGAAAGCGCATTTTGATATTTTCTCCCCCTCCAGTGGGCGTTGTATGCTATAGAGTGTACTGCTGCTGCTGCCTGGCCAACGTCTCTCTGCCTGGCATTGGGGGCACCGTGCCCGAGTCCAAGCCTTTCTTCTACGTGAACGTGGCCGACATCGAGACCCTGGAGGTAGAGGTGTCTTATGTGGCCTGCACCACGGAGAAGATTTTCGAGGAGAAGCGGGAGCTCTACGACGTCTACGTGGACAACCAGAACGTGAAGACGCACCACGACCACCTGCAGCCGCTGCTGAAGATCAACAGCGCCGACCGGGAGAAGTACCGGCGGCTCAACGAGCAGAGGCAGATGCTGTTATATTCCCAGGAGGTGGAAGAAGATTACAACCCTTGTGAAGAGGACCTCTTTGTGCTGTTTTTCCTTGAGCAAAACAACCGGATATTTCAGACTTTGTTGGAGGTGTCCTCCAGTCAAGACAAAACTCTGACAGCCGAGCATGCTCGGGGCATGGGTTTAGACCCCCAGGGAGACCGGAGTTTTCTTATGGACCTGCTGGAGGCCTACGGCATCGACGTCATGTTGGTCATTGACAACCCCTGTTGCCCATAGGAAGGATGAGCCGCTATCACATGGGGATGGCCTGATTTCTAATTGCCACATAGGAGTATTTATACTTCCAACAAATGTAATTTTTGCATCTCCTTTCTTCCCTTCTTCCCAAGAGGTAAGATGAGAGCACCTTGATTTTGGAGGTCGTTGGAAGCTACCATTTTCCGAGCTGCTGCTGGGTTCAGACTTAGGAGTTATCACGGCAGCCTCTCTCGTCTCCTCATGATTGACTTAAGGTGATGGGGTGAAGGCCACCTATCACCAGGAGCTCTGGACACCCTGGCTGGACTCTTGGGAAAGTCTGTCTGGTCTCTGTCATTTGATGTATCAAGAACGAGACCACTGTCCAGTGGGGCCTTGCATATCCATCTGCCCAAAGCAGAAGCTAGACCAGATGGCCTTCCAAGGTTTTTATCAGTTCTGGGAGTCTTGTCTTGCGGTCAAATTCCCTTTCTGGTTTATTAGAGTAAATCTGTGTTTTCTCTGTTCATGTAGAGACTTCAGAGTGGGACAAAGGATGTTTCTGTCACCAGGTATGAAGCTTCTCTAGACAGAGGACAGGGAGAGGTGGCTTCTCAGTCAGCTGAAAACTAAAACTGTAAAAATGAAGCCTTGAAACCTTTCTCTAAGTTAACAGTGGCCGCTCCATGTCATAGTCTTGTTTCTCTGAATCCCCTCCTGGGACGGGCTGGCACATTCCTCTGGGCTGATGTCAACAGGAATATGTACCAGTTAGGAGCCTTTATAAACAAACTTCTCTTTAGCAGAGGCAACATTCCTCAAGCTAGGAAACTGGGACCAGAGAAGTACCAGACTTGTTAGCAGAGGCGGCAGTGCCTGTACCCAGGGGAGTGGTTGGGAACCCCATGTGTGAGTGATGAGTTGCTCTGCTGTGCAAGGAGCCTTTATAAACAAACTTCTCTTTAGCAGAGGCAACATTCCTCAAGCTAGGAAACTGGGACCAGAGAAGTACCAGACTTGTTAGCAGAGGCGGCAGTGCCTGTACCCAGGGGAGTGGTTGGGAACCCCATGTGTGAGTGATGAGTTGCTCTGCTGTGCTCTGGAGTGCTTGGACCTGGGATAGCTCCTGTCGGCCCTGCCTGTTCTGTTTGGCTGGAGTGTCCAGTGGGTGTCAGCCTAGGTGAGATAACCATGGTTTGTTAGAGAAGCCGGCTCCTGTGAGTTGAGTGGAGGTCTTCTGGGCCAGTTCAGGATTTTGACTTGGGGTCCTAGGTTGTTTGTGACATATAACTTCCTCCCCTTCACTATTCCTGCCTGGCTGTGTTATTGGAATAGGTGTCTGTGTATGTGTCCGGGACCAAGTTCCAGCCAGGCTAGTGTCAGAGAGAAATAACTTTCAAATGGATGGATCATGTGTCTTGTCTCGAGACTAGCTTTGTAGGGCTTATTGCTTTATTCAAAACCATTCTCACTGCAGCTCCCTGATACAGAATTCAAGATTAAAGAAGTTCACGTGTGGAAATGCAGACATTGACTAATCAAGGTAGTGTCTTTTATGTAAATATATAAATGTTTGGGCATTGAAATGTAAACTGTACATTTTTCTCCTCTGTGGGTTTAGCTATTTCAGTAATATATTTGTTTACAGAAGAAAAAAAAGAATCTGTTTAGAAGCTGAAGCTTCACTGCCTTTTTCCTTGAAGAGTGGCCATCTCCTCTTGTTCCTGGAGAAGGAGCAGCCTTTGTAACTTGGGTCAAGTAATGGTTACTCTTAGTATTATCAGAAGGTTCAAGGCTTTCTAAGTTGGGATGGGCAGTCAGAAGTAGGGGTGGGGTAAAAGGAAAGGTCAGGTTCTCTTGGAGGACACAGGTAGGCCCTTGTTCTGTGGAACTGGGGAATTTGTTGGGCAAATACTCTTTGTAAGCCCTTCTGCTCCAGAGGGCTTCTGCATGCGAATGCTTTCGTTTCTGTGCTATTGTTAACTCCAGGCTCAGACCCGCTGATGTAAAGGTAATCAGATGAAAATGAGGTTCCTGTGTTTCTCTTTGAATGGCGGGCCCAGGGTTCCACACCCCTTTTAACTCTGTGCACTTCTAGGCAGCCGTCCATCTGGCATCCCCTGGGCTGGGAGTGGCCCTGGGAGAGGGTGCACCCATATCGCAGTGCCACGTCTGAAGTCGAATGCAGCCTGTGTTTGGCTGACCCCAGAGCAGAACCCCTATGCTCCCCTTCACCCCCTCCGCCTCCCCAACAGAGTCCTTTGAAGAGGATACCCTAGTGCTGGTCCTTCCCTGCATTGCCAGCTTCCTGGTGAGGCCAGGAATCTAGCGCAGCGCCCTCTGCTGGGCTGCAGAGCACGCTTCTACCCTGTTTTACCCTCGTCACTGTCATCCCCAAGGAGACATGGATGGAGTTCATCTTTTGAAGGCTCCCTCCCACGCCTCCCCCCACCCCTCCTTCTTCCCCAGTCTCTCAGGTGAGCAGCACACCAGCATCACTTGCTGCCAGGTCTCTGAAAGGAGAATTTGTTGGCGAGGTACCAGGCAGGGCTCCCTGCACAGACACAGCAGAAGCTAGAAGCCACCCAGACCTACTTTTGTGTCACTATGGAAATACTTTCAGAGAAACCATCTGCTTTTGTTTGGAAGTCACTGAAGAATGTCCTTCTCTGTCCTCTGTAGAAACAGAGCTTATTATAATATTACTGTGACCTTCAGGAGCTGGCTGGGAAACTCAGGTGTGGGTACTTAGATTGATGGTGACCTTCTGTCCCTCTCGACTCTTAAACCTCCTCCTCCCAACCCTATGCCAGCTGGCTTGGTCCTTTTGGGGAACTTTAAGCCTGATCTAAAGCCAAGCTGTACGTGTGTGTGTGTTCAGTTGCTCAGTCATGTCCAACTCTTTGCGACCCTGTGGAGTGTAGCCCACCAGGCTCCTGTGTCCCTGGTATTTTTCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGATCTTCCTGACCCAGGGATTAAACCCCCGTCTCTTGAGTCTCCTGCACTGGCAGGTGATTCTTTACCCGCTGAACCAAGCTGTGAGCCATGCCCTAAGCTGGAAACATTGCTGACTTGAGATGTGGGGGCCACTGGGTCATCACTGGATGAAGTTAGGAGAAATTCTATGTGGTCAGAGTCCTTGTGGGCCTAGAATCCAGGCTTGGAGTTTGCTGATGTCTAGTTGGATATGACAAAGTTCTGGAAAAATGGATTTTTTTCACTTGTGCAGGCTTGGCAGATGGTACTCTTCAGCCTTTGGGACAATGTCCAGTTGTCCTCTGGATTAGGACTCTTCTGAAGGAATCAGAAATGATAGGACTTATCTTTCCCCAGACCAGAAAGTATAGGCTAAATAACAGTTCTGAATTAGCTTTGGCTTTTGCTAAGCATGAAGCACCCCTTAGGCCTGGCATAGATCCCTTCTAAGGTAAGTGCCCATACAGTCCTCAGTAAGTTGTGATTGCTGTGGATTAGAAGGCTGCCTCTGTCATTCATCATGGCGTCGTGTCTTCCATTTGGCTGGAGAAGGGAAGCTGAATTCATTGATAGAAATCATTTAGCCTAGGAATTTGCATTTATAACTTGTTTGTCCCACATGAAAAAGCAAGATGGGAAATTTAAGTATAGCACAGGGTGCAGATAATTCTCAATACCACATGTGAAGAGTCATCGATCAGTGTAACTACCTGTTTTAGCTAGAAGATAAAGGTAAAGATAAATGAAATCATAGCTGAACCAGCTTTTCATTCTGGTGGTTATGAGGGCAAACTTGCTATTTGTCTTAATACACTGAAAGCCCTTCAAACAGAGTAAAAAGGATGAGCTTACTCACCTTTAAACCAAGGCCTTTGGGGAAGCTTTTGCAAAGGGCAGTGATGTGAAGTTTTTGTTAACCTTTTAATGGCAGTACAACAACCCTCTAGGAAGAAGGGAACCTCAGGAACTTGTTTTTGTTTTGAAATGAAACTACCCAGGTGGCGCAAGTGGCAAAGAATCCACTTGCGTCTCCTGCTAATGCAAGAGACGTGGATTTAATCCCTGGATCAGGAAGATTCCCTGGAGAAGAAAATGGCAACCCACTCCAGTGTTCTTGCCATGGACAGAGGAACCTGGTGAGCTACAGTCCATGGGGTTGCAAAGAGTCAGCCCTGACTCTGGACTGCTAAATCAAAGAAGGAAAAGAAACCACAGAGCCCAGGGAATGAACTGAGGTGCTTTCTCCCGTCCCAGGAGGATCATACTCACAGAGGTACAGGAAGGGGCGGGGTGGAGGGGGTTGCTGCTGAATAAGACCAAGCGTTCAGCTTGACAATGAACTTGCCTTGACGCGATGACAGTTCTCAACCAGGCAGGAAAGGTAGTAATATGGGGACCAGTGTGTGTCAAATGGGCTCTCATCTCCCCGGTAGGCTCCTGGCTGTGGGCCTGGACTCTGAAAGGGCCAGTCCTCGGTCTCTTCTCTGCACTCCTGCTGTGCCTGCATGTAGTGCCCTGTGTTGAGGCTCCCGTGTGCCTGGGGTCGCCTCAGCAGGCCAGCCCACCCCTCTCCTTTCAGGAAAGCCCTTTTGTGATTCAGGTGTAGGGGAAGAGGAGCTCAGGGCTCCTTTTACTCCCAAGTCAAGGATGGATTTTTTAATATTCCATTTGTATTACTAATATACCTCTGTTCCCAGGAGCTACTGGAGGGCCGAGTGTGGTGGAAAAAGGCTAACTGTGAATTAAGTTAATGTTTTTCTGATAAGAAATGGAAGTTTATTTTTATATTGGTATGACTATGTGATGCATTGAGGATGCAGATGTTGAAATGGAAGGAAATATCAAAATGATAATCCTGGAAGAAATGGGCAGTATTACCATTTGGAAGCAGCTGAGACCCCCTTTTGTTTGTTTTTTATTTAAATGTTCTGGTGAGTGAATAAGGACTGTCCTGTGAAATCTAACAGCCTTTTGAGGAGATAAAGTTGACAGTCCTATGGAGGATGACATACAGTCACCAACTTTAAGTAAGACTCCTGTACGAAAGGGGGTGAATGTGATCAGGCTGATTGCTAGGCCTCTTAACTAGAGGGAGCCAGAGGTAGTTTTATAACTGTCACTTTAGCTCATTTTTTTGGAGCTGGAATACAGGGACTGTTAGATGAAACTGCACATTTAGAAAGGAAATAATTTTCTAGTACTATATAGAGAACTGATGATGGAGAAGTAAAGCCCTGCTCTCATCTCTTTAGCATTTATTCTAGAAGCTCAGCACTGAATGGGCTTTTACAGGTAATAGGATCTCAATTCAGGAAATGTATTTAATCACCATAAACAGATGGGTACGAACCACCTCTCTTTGCCATAGAATGCCTCTTTACACTAATGGTACATCTGTTTTGCTAAGGACAGTTGGGGGATGCGGAGGTGGGGTGTAGGGTTTTATGAACTAGCCAGAGATGATCCACAAAATGAAAAACCCACACACTGGTCACTGAGTTATCGGATTGTCAACATATATTGTTGACATTGGAGTGAAAACTCCTTCCTTTGTCCAAATCAAAGATTGCGTTTCAGTCTAGCCCTCCAAGACCAGTGAGGAAAGCTGTAGGTTCTGTGCTTTTGATAAGACTGGGTAGGAGACCTGAGGGGTATGGGGTCAAGGAAAACAAAACTAACCTCCTTTGTACATCTCAGGCTTGTTGGCTGAATTTTTTTTTTAAATCGGTCTGACAAGTAAGTCTTTTCTGAAAAAGAAACTTGGGAGAAGTTCTGTGTTTTCCAAGTGTAAGATCAGCATAGCCTCCCCGTCGCCTTAAATGTCAAACCCCTATTTTGATGAATATCCCAGTGTAAGAGTCATAGCAATAAGAGAAACGGAATCTAGTTTTGTTTCTTTAGCTCCTAGGATGAAATTAGTAAGACAGTTGATACATCTCCCTGAATGTCCTGCATCTGGCTCTGCTGTTCTCTCTTCGGTGGTAATCATTTAGAAGGCCTAAGGAAAGCTGGGGTTCATCCCAGCGGGCACATGTTTCTTGAACTGATTATGTTCTGTGCTACAGATAACATCTGTGTATATCATATCTGTATATATCTGAACCAAGCTGTATGCAGAGAGGTTGATATAACTATATTTACAGAAAACAGTTTTTACGATTAAAATTCACATTTTAACATGAACACGTGTGCTGCACTCCTTTGTGATGGGAAGGAGTGGCAGCCGCAGGCATGAGCAGAACGTATGGTGCTGACCTCACTTAGGG EMBV3_07965 AGGCACTGGGTGTCTGAGTGTAAGGCCAAGCAGTCCTACGTGCGGGCATTGACCACCGAT Gene GeneID:506660|NTF4:XM_002695202:901_cdna Constitutive 0 NULL GeneID:506660 18 GENE NTF4 NULL neurotrophin 4 EMBV3_19352 TGAGAAAAATGTCCATCTTTGGGCACCAGAGCTGTCTGACCCACTGCGAGAATATTGCTC Gene GeneID:615589|LOC615589:NM_001098467:60_cdna Constitutive 0 NULL GeneID:615589 5 GENE LOC615589 NULL similar to RIKEN cDNA 4732456N10 gene EMBV3_34378 GCCCTGCTCTGGATGGAAATAGGAATGCCGTGTCTTGCTGGGATGGCGGTTCTCATTATT Gene GeneID:616707|ABCC4:XM_002683737:3_cdna Constitutive 0 NULL GeneID:616707 12 GENE ABCC4 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 4 EMBV3_06679 CCATGGTTGGCTTTTTCTATGGCACCATCATCTGGGTCTACTTCCAGCCTCCTTCCCAGA Gene GeneID:507745|LOC507745:XM_002691588:130_cdna Constitutive 0 NULL GeneID:507745 11 GENE LOC507745 NULL similar to olfactory receptor 362 EMBV3_35120 CCCTTTTGCCTGTGGGAAGAAGTGCATGGACCCGTATGAAGAACCCTGCTTGTTACCCTT Gene GeneID:521427|WFDC8:XM_002692341:147_cdna Constitutive 0 NULL GeneID:521427 13 GENE WFDC8 NULL WAP four-disulfide core domain 8 EMBV3_23630 CGCCTGCTTGATGGAGAAGGAGGTGGTTCTGGTTTTGGAGGATCTGATTATAGACGTTCA Gene GeneID:788424|KRT24:XM_002695970:306_cdna Constitutive 0 NULL GeneID:788424 19 GENE KRT24 NULL keratin 24 EMBV3_05780 AGACGGACTCCATCCCGCTGGTGGATGACATCCGATTCCACATGGGCAGCCTGGTGCAGA Gene GeneID:507417|ABTB1:NM_001083384:17_cdna Constitutive 0 NULL GeneID:507417 22 GENE ABTB1 MGC143230 ankyrin repeat and BTB (POZ) domain containing 1 EMBV3_40785 CGGATTATATGCTGTATGTATACGATTCTCGAGCAGGTGAAGAAGGCGCGATCAGGGCGG Gene GeneID:529873|CADM1:NM_001038558:98_cdna Constitutive 0 NULL GeneID:529873 15 GENE CADM1 IGSF4 MGC134147 cell adhesion molecule 1 EMBV3_00927 TGCAGGATCTTGGCTTCTGCCAGGAAAGTACATGCAGTCAAAGGGTGTGGATTTGGGACC Gene BVT0102_299086 + 1 EMBV3_17492 GK000007.2:74474260-74662602 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34052 ATATCCAGATTCCTCTGGATTATGAAACAGGATGCTGCAGCAGCTATTGACAACATGAAT Variant GeneID:787681|PPIE:NM_001098161:337_cdna 142^185 3 EMBV3_33246 GeneID:787681 3 GENE PPIE NULL peptidylprolyl isomerase E (cyclophilin E) EMBV3_04263 CGCACTGAAGACTTATGGCAGTGAAAGCTTCTGATTCGTCACTGCCCAGCAGCCCTGCGT Gene GeneID:504456|TMEM50A:NM_001075163:72_cdna Constitutive 2 NULL GeneID:504456 2 GENE TMEM50A MGC139369 SMP1 transmembrane protein 50A EMBV3_12584 CTGAAGGAAGAGGAACACCTTCCAAGACAAAACAGTCTTCTGGAAAAATGACGCTTATCC Gene GeneID:768231|CPSF6:NM_001078106:49_cdna Constitutive 0 NULL GeneID:768231 5 GENE CPSF6 MGC142454 cleavage and polyadenylation specific factor 6, 68kDa EMBV3_04327 CCTCCTCCGTGATGACTTATTCCAAAGTAGGAGATGAACCGCCAAAGGTTTTCCAGGCCT Gene GeneID:533379|MLF1:NM_001038158:143_cdna Constitutive 2 NULL GeneID:533379 1 GENE MLF1 MGC133499 myeloid leukemia factor 1 EMBV3_13596 CTCCGGTGGACGCTTGAGCCTGCTGTGTAGGAAATGAGGCGTCGCCGAATAGAAGTTAAT Variant GeneID:513592|KPNA2:NM_001034449:87_cdna 103^200 1 EMBV3_32032 GeneID:513592 19 GENE KPNA2 MGC127507 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) EMBV3_24394 ACCTGGTTCTGTAAACCTGACCAGAGGAAAGAGCAGGCATAAGGACACGAGGCCACAACA Gene BVT0102_271319 + 0 NULL GK000011.2:19090402-19179547 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027069 TCONS_00027066 TCONS_00027073 TCONS_00027067 TCONS_00027071 TCONS_00027072 TCONS_00024278 TCONS_00027070 TCONS_00024279 TCONS_00027065 TCONS_00027068 2 XLOC_015181 XLOC_014468 Coding TCONS_00024278 XLOC_014468 NonCoding NonCoding FEZ2 11:19079028-19096268 x TSS17853 245 1 TCONS_00024278_1 39 0.359183673469388 2 0.985904054759557 0.012484817524874 0.0127333278082186 0.0215952660505912 0.0080621979641739 0.0112475940655111 0.00601574423629312 0.00311685525150583 0.0167543320218755 0.00613866955133304 0.000418998522938379 4.27500239031723e-47 0.000579565758934961 0.00501303883591481 0.00728787609359856 0.00297955028971722 0 0 0.00119106734585597 0.0121921623652987 0.00867109724276554 0.00112098668697777 0 0 1.35977169534912e-05 0.0163654727451362 0.0111324807390257 0.00563605615695356 4.71328853404772e-169 1.0128974674288e-94 0.000394480854393462 0 noncoding 0 0 0 0 -0.0887717987952545 0.41611052964824 -0.0324924794179183 0.543673983466952 ATCAAAGAGCAAGCCGTCACTCCTCTCTCCCCCTGGGGTACTTGGGGGCCGCACAGAGCTCCACAGCTTCAAGGACATCCAGCAGGAGTCTGCATTCCACCCTGTTGTGGCCTCGTGTCCTTATGCCTGCTCTTTCCTCTGGTCAGGTTTACAGAACCAGGTTTGTTTTGCCTGATGGGCAGCAAGCGAAATCTCTGAGACGGCAGGAAACAAAGAATTTACTCACAAGGCAGTCAAAGTAGAGT TCONS_00027076 TCONS_00027073 r 5' 0 TCONS_00027076 TCONS_00027073 r 5' 0 EMBV3_15201 GTGGGTCCCTCTGCTCTCAAAGACACCATGACCCTCAAATGGCTGGAGAATGACCTCTAT Gene GeneID:100297143|LOC100297143:XM_002696610:111_cdna Constitutive 0 NULL GeneID:100297143 21 GENE LOC100297143 NULL similar to Huntingtin-interacting protein 14 EMBV3_23356 CCTTGACTCACCAAAACAGGTCTGGATACTTCCTCTTTCTCCCATGAGTCTTGAGTGGGC Gene BVV0102_341457 + 1 EMBV3_26893 GK000005.2:101757821-101761244 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201330 1 XLOC_122977 NonCoding TCONS_00201330 XLOC_122977 NonCoding NonCoding - 5:101759323-101759635 - TSS150898 312 1 TCONS_00201330_1 81 1 0 0.000479687117268047 0 0 0 1.58242686256205e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000115247378940413 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0649620679364713 0.660021343234005 -0.0296343922086436 0.656880920007946 CTCAGCATCTTCAGTGTTAATGCTTTAATGATACTGATGTATTTTTATTTCTCCTATGAGCTTATTTCATCTTAGAGCCTTTGCACAGACCAAGGTCAAAGGTCACTTCCACTGCAAAGACTTCCTTGACTCACCAAAACAGGTCTGGATACTTCCTCTTTCTCCCATGAGTCTTGAGTGGGCATCCATGAGAATACTTATCACCATGCATTTCACTGTGTTTTGCCTACATCCCTCCCAGATAACACATTCCTTGAGGGTTGTGAATCATATCCTTTTATTTAAGTATCTTTCATTCTAAATGCTAAGAAT TCONS_00196110 . 5' 1274 TCONS_00196110 . 5' 1274 EMBV3_08255 CTGTTGAGTCATGGCAAAAAACCCTTCAGTAAGCATGTGAGGAAGCTGCGTGCCAGCATC Gene GeneID:511051|RPL6:NM_001031756:123_cdna Constitutive 0 NULL GeneID:511051 17 GENE RPL6 NULL ribosomal protein L6 EMBV3_31601 CTGTAGAAATGCACCTTGAAGCATTGAGTGAAGCCCTTCCTGGGGACAATGTTGGCTTCG Gene GeneID:788157|LOC788157:XM_002686080:356_cdna Constitutive 0 NULL GeneID:788157 3 GENE LOC788157 NULL similar to eukaryotic translation elongation factor 1 alpha 1 EMBV3_06969 CAAGCCAGTCTTACTTGAGGAATTAGGTACTAGGTATGGGATGATCACATTGGAGTTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30714 AGAGCCAGCAATAGCAGCTCAGGCTCTGTCTTCAGGAGCAGGTTCACAAGAAACCAAGAT Gene GeneID:526949|OXSR1:XM_002696944:519_cdna Constitutive 0 NULL GeneID:526949 22 GENE OXSR1 MGC139049 oxidative-stress responsive 1 EMBV3_18956 TACCACGTCCACGAGTGTGTAATTACAGCACCTAGTCGATGAGGGTAGACGGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_37555 GAGGGCACCTACCGGCCCAGCAGTGAGGAGCAGTTCTCCCACGCAGCTGAGGCCCGGGCT Variant GeneID:787466|CRB3:XM_002688882:119_cdna 510^847 1 EMBV3_40160 GeneID:787466 7 GENE CRB3 NULL crumbs homolog 3 (Drosophila) EMBV3_28910 GACCCGGTCGCCTTCCAGAGGGCCTTGCAGGGAGCTGTATTTGATGAAAATACTAGAAAA Variant GeneID:100126047|NUDT6:NM_001105650:2_cdna 269^854 3 EMBV3_12179 GeneID:100126047 17 GENE NUDT6 MGC157079 nudix (nucleoside diphosphate linked moiety X)-type motif 6 EMBV3_42368 CACCTGTGCCTCACACCTGGTCTCGGTCATGCTCTTCTATGGATCGTTGCTCTTCACATA Gene GeneID:509124|LOC509124:XM_002693698:369_cdna Constitutive 0 NULL GeneID:509124 15 GENE LOC509124 NULL similar to olfactory receptor 450 (predicted) EMBV3_30238 TGACCATCCACCAGTGGAACGATGCCAAGTGGACAGAGGTTTCCCACACCTTCTCGGATT Gene GeneID:513023|FBXO6:NM_001034433:64_cdna Constitutive 1 NULL GeneID:513023 16 GENE FBXO6 MGC128818 F-box protein 6 EMBV3_18085 GTGGCGTCTGCTGCTTCCAGGCGATTTGAGGGAACCCCTGAAGTCTCGATTCAGTTGCCT Variant GeneID:614551|UBL5:NM_001037710:8_cdna 92^130 3 EMBV3_19646 GeneID:614551 7 GENE UBL5 MGC127118 ubiquitin-like 5 EMBV3_05634 GAGAATCCTGCTATGATTTCTGTCGGAGAGTGTTTTGCCTATGTTCTCCTCTAGGAGTTT Gene BVT0101_010485 - 1 EMBV3_37372 GK000030.2:75265103-75445124 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238325 TCONS_00178132 TCONS_00070843 TCONS_00048374 TCONS_00122697 TCONS_00209712 TCONS_00079060 TCONS_00029764 TCONS_00040746 TCONS_00009163 TCONS_00152649 TCONS_00224115 TCONS_00197400 TCONS_00022062 TCONS_00252222 TCONS_00251849 TCONS_00006307 TCONS_00039626 TCONS_00047824 TCONS_00122315 TCONS_00206864 TCONS_00251853 TCONS_00238762 TCONS_00107793 TCONS_00115689 TCONS_00122309 TCONS_00075206 TCONS_00206878 TCONS_00189810 TCONS_00057034 TCONS_00218884 TCONS_00073906 TCONS_00232986 TCONS_00116901 TCONS_00242614 TCONS_00199805 TCONS_00063148 TCONS_00250201 TCONS_00222787 TCONS_00188851 TCONS_00221242 TCONS_00057989 TCONS_00007787 TCONS_00249712 TCONS_00241769 TCONS_00250261 TCONS_00091759 TCONS_00252227 TCONS_00031819 TCONS_00122645 TCONS_00199036 TCONS_00091663 TCONS_00007086 TCONS_00063079 TCONS_00162841 TCONS_00229388 TCONS_00063105 TCONS_00238382 TCONS_00010473 TCONS_00107112 TCONS_00251752 TCONS_00091220 TCONS_00250933 TCONS_00070984 TCONS_00218937 65 XLOC_144992 XLOC_107905 XLOC_042620 XLOC_028506 XLOC_074252 XLOC_128223 XLOC_047945 XLOC_016021 XLOC_024560 XLOC_004719 XLOC_092414 XLOC_137411 XLOC_119061 XLOC_012733 XLOC_155163 XLOC_154790 XLOC_001870 XLOC_023443 XLOC_027956 XLOC_073870 XLOC_125384 XLOC_154794 XLOC_145429 XLOC_063703 XLOC_069858 XLOC_073864 XLOC_046513 XLOC_125398 XLOC_115847 XLOC_034835 XLOC_132203 XLOC_045666 XLOC_142468 XLOC_071067 XLOC_149277 XLOC_121457 XLOC_037875 XLOC_153144 XLOC_136094 XLOC_114892 XLOC_134558 XLOC_035786 XLOC_003347 XLOC_152655 XLOC_148433 XLOC_153204 XLOC_056531 XLOC_155168 XLOC_018064 XLOC_074200 XLOC_120689 XLOC_056436 XLOC_002648 XLOC_037806 XLOC_099722 XLOC_138883 XLOC_037832 XLOC_145049 XLOC_006024 XLOC_063023 XLOC_154693 XLOC_055996 XLOC_153876 XLOC_042758 XLOC_132256 Coding TCONS_00007086 XLOC_002648 NonCoding NonCoding - 1:37454848-37455334 - TSS4163 486 2 TCONS_00007086_2 48 0.796296296296296 1 0 0 0 0 0 0 0 0 0 0 9.4067056350201e-07 1.57008762283997e-06 1.22622928375616e-06 0 0 0 9.82735425465441e-05 0.00803934631566828 0.000160045067891931 0 1.12099833122423e-05 0 1.65412690339641e-05 3.83824073258849e-05 2.15594454874111e-05 1.58401441150031e-06 0 0 0 0 0 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 9e-93 343 80.05 0.792181069958848 NM_020729.2 ODF2L Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), 3e-41 172 70.18 0.796296296296296 0 noncoding GTTTCCTTTGATGTGCAGAAGCTTTTAAGGTTAATTAGGTCCCATTTGTTTATTTTTGCTTTTATTTCCAATATTCTGGGAGGTGGGTCATAGAGGATCCTGCTGTGATGTATGTCAGAGAGTGTTTTGCCTATGTTCTCCTCTAGGAGTTTTCTAGTTTCTGGTCTTATGTTTAGATCTTTAATCCATTCTGAGTTTATTTTTGTGTATGGTGTTTGAAAGTGGTCTAGTTTCATTCTTTTACAAGTGGTTGACCAGATTTCCCAGCACCACTTGTTAAAGAGATTGTCTTTAATCCATTGTATATTCTTGCCTCCTTTGTCAAAGATAAGGTGTCCATATGTGCGTGGATTTATCTCTGGGCTTTCTATTTTATTCCATTGATCTAGTACCAAATAGCTGCACTCTATCAAGACACACATATGCAACTGTTTATTTACTTGACTCTATTTCTTACAAGATGGTAAATATCATGAGATCAGGTAC TCONS_00000351 . 3' 331386 TCONS_00000351 . 3' 331871 EMBV3_18949 GCCATGGCCTAGGCTGCCTGCCGAGTTAAAAAACACAGTTTCAATCACGTTTTCAAAACC Gene BVV0102_021564 + 0 NULL GK000019.2:42679066-42682945 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10312 CGAGGAGAAGTACATCCGAGGACCGGCGCTGAGCTCCCGGGAAAAAGAAATATTTGATAA Gene GeneID:513471|MUM1:NM_001075622:53_cdna Constitutive 0 NULL GeneID:513471 7 GENE MUM1 IRF4 MGC142826 melanoma associated antigen (mutated) 1 EMBV3_42347 GTGTATGTGTGTGTGTGTTATATGACCTTTAAAATAGCATCATTCCTTTTCTTTGTCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20780 GGGGAGGGGTTCAGAAATTCAGCAACATAAGAAAAATCATGCTGGTGAGAAGCTCTGTGA Gene GeneID:518207|ZNF345:NM_001035327:628_cdna UTR3_Alt 1 NULL GeneID:518207 18 GENE ZNF345 MGC127522 zinc finger protein 345 EMBV3_06408 ATGAGGCAGAGGTGGATGATAATGAGCAAGGCATAAATGGCACCAGCAGCAACAGCACAG Gene GeneID:281233|IBSP:NM_174084:138_cdna Constitutive 0 NULL GeneID:281233 6 GENE IBSP NULL integrin-binding sialoprotein EMBV3_37582 TTGCAGAAGACATCATGGAAGAGGTGGAGGTTGTGGCAGATGAGGAGCAGAAACAGTGGT Gene GeneID:100336684|LOC100336684:XM_002695640:69_cdna Constitutive 0 NULL GeneID:100336684 19 GENE LOC100336684 NULL Testis-specific Y-encoded protein 1-like EMBV3_11680 ATGAGGAACTGGCCAAGGACCCCGACGTGGGCCATCTGGACCCGGTTCTTCCCTGCTGTA Variant GeneID:617564|DHDH:NM_001076469:412_cdna 235^398 2 EMBV3_37483 GeneID:617564 18 GENE DHDH MGC139501 dihydrodiol dehydrogenase (dimeric) EMBV3_05690 CCATGGTTTATTACTCATGTTTTCTCTGTTAAGCACGGGCTATGGGAGTCACTGCATCCA Gene BVT0102_304905 + 0 NULL GK000006.2:95884612-95908333 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203903 TCONS_00203906 TCONS_00203904 TCONS_00203907 1 XLOC_124294 NonCoding TCONS_00203903 XLOC_124294 NonCoding NonCoding - 6:95884631-95890798 - TSS152644 601 2 TCONS_00203903_2 50 3 0.9030165423289 2.23733507715118e-11 4.4053898919666e-10 0.00097868171628031 0.000471889198382502 0.000172430840590396 0.000219983731143074 0.000203769415106497 3.55928919216331e-06 0.000630157570824056 3.00876699846055e-09 9.92428855275456e-10 0 1.16781161792583e-09 0 0 0 0 0 0.000116001418811795 0.000528004725825887 3.72145960206141e-09 0 0 0 0.000252825261872054 0.000470767562203939 0.00145256750205163 0 0 0 XR_231435.1 LOC101905113 PREDICTED: Bos taurus uncharacterized LOC101905113 (LOC101905113), 0.0 991 100.00 0.911813643926789 0 noncoding GGAGGTGTTGGTCGGGGAGGGGCACGCAGGACGTCAACAGCGTCAGGCTCATCATAAGGCGCCGGCGCCATTGACTGCCCGCTGCTCAAGGATACCTTTGCAGTGAAACCAGCGCTGCCTTTCTCACTTGATTCCTTTGGCCCAGGCTCAACCACCAGCCTCTCAATTATTTTTTAAGGAGATTTAAACTTTGAAGACTGTTGAGAGCCGCACCATCCAATCGCCTGGAAGACCTCTTCTTGGACCACAGATCACCGAACATACTATACCTCTTTGTTCTAAGAAAGAATGGAAAAATTAAAGAAGGCTACCATGGTTTATTACTCATGTTTTCTCTGTTAAGCACGGGCTATGGGAGTCACTTCATCCACATTAGGAGGTCTTGGCATTCTAGATGCCATCCAACTGATAACAAGTCCTGCTGTGTTTTACCAACATAAAAAATTAGACTGGAGACCGAGGAGCGGCAGGTGGCTTTTGGCACCAAGAAATAATCACACTTGATGTGGAAAGTAAAGTAAAAGGAGCCATCTGTTCACTGCAGGAGGACGTGAAAAATCACATTAACATATTGTCACTAACATCATGAAATACACAGTTA TCONS_00205876 r 5' 56 TCONS_00205876 r 5' 56 EMBV3_42496 CGCAGCCGCCTGTGGCGCTGAAGAAAGAAGGAATAAGACGTGTTGGAAGAAGACCTGATC Variant GeneID:539060|SERBP1:NM_001046449:52_cdna 383^572 1 EMBV3_30300 GeneID:539060 3 GENE SERBP1 MGC128417 SERPINE1 mRNA binding protein 1 EMBV3_04901 CAGCTGCTGTGTTTGCTTTCCGAGCAGTGAACCTGATGGAGGTGACATCACTGGCTGCAG Gene GeneID:615452|TBC1D19:NM_001076938:204_cdna UTR3_Alt 2 NULL GeneID:615452 6 GENE TBC1D19 MGC143093 TBC1 domain family, member 19 EMBV3_13832 AACCTGGACCCACTCATGAACCCTCACATCCGTGTGGGTCCCTCCTGAATCCTTGCCTAT Gene GeneID:613442|ZFPL1:NM_001076272:104_cdna Constitutive 1 NULL GeneID:613442 29 GENE ZFPL1 NULL zinc finger protein-like 1 EMBV3_04488 TCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCAACACAAGAGGCATCCTGAG Gene BVV0102_034486 + 0 NULL GK000022.2:53614324-53761216 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158315 TCONS_00033207 TCONS_00149040 TCONS_00149037 TCONS_00206816 TCONS_00167122 TCONS_00185576 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00050935 TCONS_00131536 TCONS_00161424 TCONS_00222179 TCONS_00233533 TCONS_00088422 TCONS_00218954 TCONS_00080098 TCONS_00106012 TCONS_00185604 TCONS_00107098 TCONS_00223049 TCONS_00231769 TCONS_00217532 TCONS_00033186 TCONS_00130054 TCONS_00207410 TCONS_00011614 TCONS_00157046 TCONS_00178734 TCONS_00220551 TCONS_00186835 TCONS_00142474 TCONS_00218948 TCONS_00230354 TCONS_00142473 TCONS_00148446 TCONS_00062718 TCONS_00231774 TCONS_00011613 TCONS_00176791 TCONS_00186489 TCONS_00157808 TCONS_00131535 TCONS_00178886 TCONS_00249554 TCONS_00106016 TCONS_00033206 TCONS_00162570 TCONS_00071451 TCONS_00186834 TCONS_00071397 TCONS_00012044 TCONS_00072307 TCONS_00201121 TCONS_00222175 TCONS_00149044 TCONS_00178735 TCONS_00073626 TCONS_00240375 TCONS_00107095 TCONS_00178732 TCONS_00218950 TCONS_00098202 TCONS_00107075 TCONS_00117596 TCONS_00207545 TCONS_00162301 TCONS_00230834 TCONS_00088420 TCONS_00206815 TCONS_00158397 TCONS_00201119 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00178730 TCONS_00178729 TCONS_00253351 TCONS_00106013 TCONS_00238290 TCONS_00048460 TCONS_00178733 TCONS_00230355 TCONS_00240373 TCONS_00054136 TCONS_00056187 TCONS_00063809 TCONS_00158779 TCONS_00162571 TCONS_00218947 TCONS_00054133 TCONS_00217533 TCONS_00142472 TCONS_00129561 TCONS_00021875 TCONS_00157807 TCONS_00166333 TCONS_00066112 TCONS_00230353 TCONS_00186558 TCONS_00230829 TCONS_00238284 TCONS_00131532 TCONS_00071703 TCONS_00185581 TCONS_00238280 TCONS_00054140 TCONS_00232767 TCONS_00107108 TCONS_00031770 TCONS_00222184 TCONS_00231772 TCONS_00185579 TCONS_00156869 TCONS_00162567 TCONS_00106011 TCONS_00107100 TCONS_00231775 TCONS_00098201 TCONS_00107076 TCONS_00158314 TCONS_00136035 TCONS_00154284 TCONS_00131538 TCONS_00178731 TCONS_00207543 TCONS_00111146 TCONS_00212984 125 XLOC_096769 XLOC_019441 XLOC_090917 XLOC_090914 XLOC_125336 XLOC_101958 XLOC_111629 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_031050 XLOC_080241 XLOC_098315 XLOC_135488 XLOC_143015 XLOC_053209 XLOC_132273 XLOC_048982 XLOC_062697 XLOC_111657 XLOC_063009 XLOC_136355 XLOC_141257 XLOC_131531 XLOC_019420 XLOC_078765 XLOC_125926 XLOC_007165 XLOC_095506 XLOC_108507 XLOC_133868 XLOC_112886 XLOC_086899 XLOC_132267 XLOC_139844 XLOC_086898 XLOC_090326 XLOC_037445 XLOC_141262 XLOC_007164 XLOC_106565 XLOC_112541 XLOC_096263 XLOC_080240 XLOC_108659 XLOC_152497 XLOC_019440 XLOC_099451 XLOC_043222 XLOC_112885 XLOC_043168 XLOC_007594 XLOC_044076 XLOC_122769 XLOC_135484 XLOC_090921 XLOC_108508 XLOC_045388 XLOC_147039 XLOC_063006 XLOC_108505 XLOC_132269 XLOC_058448 XLOC_062986 XLOC_071762 XLOC_126060 XLOC_099183 XLOC_140324 XLOC_053207 XLOC_125335 XLOC_096851 XLOC_122767 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_108503 XLOC_108502 XLOC_156291 XLOC_144957 XLOC_028592 XLOC_108506 XLOC_139845 XLOC_147037 XLOC_031945 XLOC_033990 XLOC_038535 XLOC_097231 XLOC_099452 XLOC_132266 XLOC_031942 XLOC_086897 XLOC_078274 XLOC_012548 XLOC_096262 XLOC_101171 XLOC_040830 XLOC_139843 XLOC_112610 XLOC_140319 XLOC_144951 XLOC_080237 XLOC_043473 XLOC_111634 XLOC_144947 XLOC_031949 XLOC_142251 XLOC_063019 XLOC_018015 XLOC_135493 XLOC_141260 XLOC_111632 XLOC_095329 XLOC_099448 XLOC_063011 XLOC_141263 XLOC_058447 XLOC_062987 XLOC_096768 XLOC_082254 XLOC_094044 XLOC_080243 XLOC_108504 XLOC_126058 XLOC_067046 XLOC_130301 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_42474 GACAACACCCAGCTTTATGTAAATATCCCAGGTCTGTCAGGAGGTGTGGGATGTACCCAC Gene GeneID:513812|SYNGR2:NM_001100358:395_cdna Constitutive 0 NULL GeneID:513812 19 GENE SYNGR2 Cellugyrin synaptogyrin 2 EMBV3_39885 ACTGGGCTAGAAAGGCATACAGGTACTGAAAGAGGCCTTCGAGTTTCGTCCAGTAGGAGA Gene GeneID:510026|ATP1B4:NM_001101919:7_cdna Constitutive 2 NULL GeneID:510026 X GENE ATP1B4 MGC166431 ATPase, (Na+)/K+ transporting, beta 4 polypeptide EMBV3_38874 GTGAAGTGTGCTACAAACCAGCCAATGTTCTTTGCTGAGAAGTTCCATCAGGCCATGAAG Gene GeneID:511937|LOC511937:XR_083847:127_cdna Constitutive 0 NULL GeneID:511937 14 PSEUDO LOC511937 NULL similar to Annexin A1 EMBV3_13231 CAGGCAGGGATTGATGGAGGCTCTTGGCCTCTCCAAGTCAGTGCTTTAGAAATTCCCAAT Gene GeneID:505907|HSPA13:NM_001038505:6_cdna Constitutive 0 NULL GeneID:505907 1 GENE HSPA13 MGC133835 STCH stress 70 protein chaperone, microsome-associated, 60kDa EMBV3_06606 GGCGCCCAAAGAGGCTTAACGCGCAAGGCATTATGGGACTCGTAGTCTTTGTTCCCTTTA Gene BVV0102_020228 + 1 EMBV3_38372 GK000016.2:31137375-31177714 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42673 CTGGGGAGGTTTGGCACAAGACTTTCACCATCTGTACTTCACATCTTATTGTGGTGGGGC Gene GeneID:521167|LOC521167:XM_002697554:343_cdna Constitutive 0 NULL GeneID:521167 23 GENE LOC521167 NULL similar to olfactory receptor Olfr164 EMBV3_33534 GCTGTCCTTTTGCCTCCACACCGAGGTTGGTGCTGTGTTTTTGAGGGATGGTCCTCTTTT Gene GeneID:532483|ING4:NM_001035389:55_cdna Constitutive 1 NULL GeneID:532483 5 GENE ING4 MGC127324 inhibitor of growth family, member 4 EMBV3_17111 GCTGCTGCTCTGGTGGCATTGAGCACGTAGTTCTGATTATGAAAGTTCTTTGCCACCTGC Gene BVT0102_319651 + 0 NULL GK000007.2:97406521-97436217 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214663 TCONS_00214660 TCONS_00214661 TCONS_00214657 TCONS_00214664 1 XLOC_130741 Coding TCONS_00214661 XLOC_130741 Coding Coding RHOBTB3 7:97350680-97408913 = TSS160496 4799 1 TCONS_00214661_1 611 12 0.917794339881852 0.000326306243446271 7.59418369635777e-08 0.000119293468641408 0.000220250898288589 8.6272931437876e-05 1.92063655134698e-11 4.12018200131996e-05 1.69947673708887e-23 0.000265540157231288 0.000418164440939005 0.000154048572674022 0.000193947618683557 0.000141695822881345 1.31971048884542e-28 2.48304288784643e-12 0.00415320834754751 0.00119076884597747 0.00127937777887624 6.42746494017503e-19 4.29860354733578e-05 2.28729056502857e-05 0.00222167735419933 0.00176667644636651 0.00326704095494065 8.95456711839853e-09 2.36869272623339e-08 2.26044681439315e-10 0.000667201578184466 1.28163737187422e-11 0.000363501997278696 XM_002689396.3 RHOBTB3 PREDICTED: Bos taurus Rho-related BTB domain containing 3 (RHOBTB3), mRNA. 0.0 8487 100.00 0.980412585955407 NM_014899.3 RHOBTB3 Homo sapiens Rho-related BTB domain containing 3 (RHOBTB3), mRNA. 0.0 3443 81.95 0.729735361533653 TCONS_00214661_1 sp|O94955|RHBT3_HUMAN RHBT3_HUMAN Rho-related BTB domain-containing protein 3; 0.0 1231 95.91 0.998363338788871 2 coding 0 0 1 0 0.0214454555746349 0.8988000540431 0.00787884636130136 0.923437331286854 GGAGCCGACCTTTCTCCCCGTCGCCGCCCGGCCCCGGGGGACTGGAGATCATGTCCATTCACATCGTGGCGCTGGGGAACGAGGGGGACGCGTTCCACCAGGACAGCCGGCCGTCGGGGCTCATCCGCGCCTACCTGGGGAGAAGCCCGCTGGTCTCCGGGGACGAGAGCAGCTTGTTGCTGAGCGCGAGCGGCGCGGCCGCGCGGCCCGTGTTCACCGAGTATCAGGCCAGCGCGTTTGGGAACGTCAAGCTGGTGGTCCACGACTGTCCCGTCTGGGACATTTTTGACAGTGATTGGTATACCTCTCGAAATCTAATTGGAGGTGCGGACATCATTGTGATCAAATACAATGTAAACGACAAGTTTTCATTCCATGAAGTGAAGGATAATTATATTCCAGTGATAAAACGAGCATTAAATTCAGTTCCAGTAATCATTGCTGCTGTTGGTACAAGACAAAATGAAGAATTACCCTGCACATGCCCGCTGTGCACCTCAGACAGAGGGAGCTGCGTCAGTACGACGGAAGGGATCCAGCTTGCTAAAGAACTAGGAGCCACCTATCTGGAGCTGCACAGCCTCGATGACTTCTACATAGGAAAGTATTTTGGAGGAGTGTTGGAATATTTCATGATCCAAGCCTTAAATCAGAAGACAAGTGAAAAAATGAAGAGAAGGAAGATGAGCAACTCGTTTCATGGAATTAGACCACCTCAGCTTGAACAGCCAGAGAAAATGCCGGTCTTGAAGGCTGAAGCATCGCATTATAACGCCGACTTAAACAACTTGCTGTTCTGCTGCCAGTGTGTGGATGTGGTGTTTTACAGCCCAGATTTAAAGGAGGTGGCCGAGGCCCACAAGATCGTTCTCTGCGCCGTCAGCCACGTGTTCATGTTGCTCTTCAGCGTAAAGAGTCCTGCTGACATTCAGGATTCCAGTATCATCCAGACCACCCAGGATCTCTTTACTATCAACAGAGACCCCGCGTTTCCAGGTGCTAGCCAGGAGTCTCTGGGCAACCCGCCCTTACGAGTCATCGTTAAAGACGCCTTCTTCTGTTCTTGTTTATCGGACATCCTGCGCTTCATTTACTCAGGTGCCTTCCAGTGGGAAGAGTTAGAAGATGATATCAGGAAAAAATTGAAAGATTCTGGAGATGTTTCAAATGTAATTGAGAAAGTTAAATGCATTTTAAAAACACCAGGAAAGTTTAATTGCCTAAGGAACTGCAAAACCTATCAAGCCAGAAAACCTCTGTGGTTTTATAACACTTCCCTCAAGTTTTTCCTTAATAAACCAATGCTGGCTGATGTTGTCTTCGAAATACAAGGTACGACAGTGCCGGCCCACAGGGCCATCCTGGTGGCCCGGTGTGAAGTGATGGCAGCCATGTTTAACGGGAATTACATGGAAGCAAAGAGTGTTCTGATTCCAGTTTATGGTGTTTCCAAAGAGACTTTCTTGTCATTCTTGGAATATCTATATACAGACTCCTGTTGCCCAGCTGGCATTTTCCAGGCCATGTGCCTCCTGATCTGTGCGGAGATGTACCAGGTGTCCAGACTGCAGCACATCTGTGAGCTCTTCATCATCACCCAGCTGCAGAGCATGCCAAGCCGGGAGCTGGCGTCCATGAACCTTGACATAGTCGACCTGCTCAAAAAAGCCAAGTTTCACCACTCTGATTGCCTCTCAACCTGGCTGCTTCATTTCATCGCCACTAACTACCTCATCTTCAGTCAAAAGCCTGAATTTCAGGATCTTTCAGTGGAAGAACGCAGTTTTGTTGAAAAGCACAGATGGCCATCGACTATGTACTTGAAGCAGCTTGCAGAATACAGGAAATATATTCACTCCCGGAAGTGTCGTTGCTTAGTAATGTGACCTGGAATTTTTATATACATGCATTTTTTCCTTGTTATTATGAAGAATGGGGTACTTCTGGGTTCCAGGAGAATTCTTGCAACCGAAACCAATATGGGAGTTTAAAAAAATCACCATTCAGCTTACCGTGCTTATTAGATCTTGTTGGAAAAAACTACTATTGTGATCTTAAAAGGGAACAAAGTATACTGTAGGTTAAAATGAAGACTTCACCCTAGCATATAAAGCTGTGTACAGCTACTTTTCCCTTCAAGATTCCTTACTGGTTTAGTGATATGAATACCCCTTCCATTTAAGAAATGTTCAAATTTTTTAAAAATCATGTAGAAATTTCATAATCTGATTAATTGCGCTATTAAAATAAGGGCCATTTAAAGACCCAGTATGACTGTTTCTATAATGAGAAATCTAGAAGACTGATCAGACTGAGATCTTAGAAATTTTCCTGGGATTTTAAACGTGAAATGCCACCTCATTCCAAATCAAGTGACAATGTTCAAACCATGATGAAAAAAAAAAATGTGTTTTTTGTCTGAACAATCCACCTGACCCACCTTGCCTCTCTTCCATGATTCTTATTAGCCAGGAAATCTGTATAGGGCTGGCTTTGTGGCTGTGTAGCCTTTGTGCTCACACGGGCCCCCTGCTTAGACGGGCACCATGCTTGGTCCACTACCCTGCGATTGCCACCTTAAAATTCATGTGTGAAGGAGGGCCCTGCATTTTCACTCTGTACTGGCAGATCATGCATATCTCCACGCAGGGTATGTTGTCTTGCTCAGAACATTATCTTCTCTGAAAGCAGAAAAGAGGCACTGACATCAAGCAAAGAGAAGGAAGCTTGCTGAGGAAAGAGATCACATGGGATTTCCCCCACCGGGAAGTCTGTACCACCCAGGGCCTCTCTCCTCTGCACCACCCAGGGCCTCTCTCCTCTGCCACCTCAACTGGCAAGTGAGAAATGCGTCACGTTGGCTTCACTTTGAGACATTCAGAGTCCTGGCTCCACACAGATAAATACTTTGCTGATCATTCTCTAAGACCAGGATGTTGGTAAAAGTGACTGGCCGGTGTGACTTTAATATGCATTTATGAAAATGCTCGTAGGAAAAGATGCTTTCTAGAGAATTTGCAATCAAAGGCCCAAGAGTTTTCTTTCTTTCAGTGTATTTACTAACATTAAGACATCAGTGGCTTGAACTATGTGAATTCTCTCTGTGGACCGAAAGGGTATTTAATGAAGAATAACATGAATCTTGTCCTTCAGGATTTTATCTTGTAAGTTCAAAGAAAGGATATAAATCAAGACTTGTTACATGGAAAGAAAAAGGTACTAAGATAGAGGACAGAATTATAGTTTCTTTTAAATCACATGTCAGCAGAAACAATTACATCAGAAGCTTGCAAGCTGAGAGATGGAAAACCAGATTACTATTTATTGTTAGCATCCTTTTCATCTGTAATAAAGTATTGGAATATATTTTTATTTTAATTTCCAGTAACTTTAGAATACACATACTTTTTGCCCACCTATTCTAAGGTTTGTTTAAACAGTCTTATGCCATAGATTAGACACAATACTATATAGTTCTTGAATGTTTGCCAACACCGTCAGAATAAAACAGTAAAAAATCCCCTACAAATATCTTACAAGAAACCTGTTTTTAATTGGATTGTGTTGATAAAGATTACTGGAATGCATTTTTAGTTTTTGTATTTAATTCATTTGAATTAATCAACTCCCACACTTGACAAGGATTAACATTGTAAAGAATAAATACTGAAGTAGATTTTTAGTAATTCATTCACATTTAAGGCCTTTTAAAATGTAATGATAGCCTTTTGCTTTTCATAAGCATATCTTTACCCCTACATTAATTACAGCATTATGTCTAAGTAACTTTTAATCTAGGAAACTGAAAAATATAAGTGCTAAAGTAAAATATTTCCTTGAAAATACTATTTAACACATCAGTAGACTATAGATAGTTTCTAGGTTGTTGGACCTACGTGAAAGTTGGGTTTGGGAGCTGCTGCTCTGGTGGCATTGAGCACGTAGTTCTGATTATGAAAGTTCTTTGCCACCTGCGAGTGACTCACAAGTGTCACAGCTCTCCTGTGCTAGTCAGAACAGTAATCAAGTTAGTCTTTAAACCTAGACTCTTCAATACCTTTGGATTAACTCGATTTAAAATAACAAGAGGTTTTTAAAAAAAAAAACAAAAAAAACTTACAAACTATCTTGGAAAATGAGTTCTCTTTTAGAGTTTTTCTAATTGAAAGATTATTTCTAGATGAATGTATGCTTTGTGCTGATCTCTGCTTCAATATATTTATCAGTCATTTTATTTAGAGAAGATACTGTATAGTATCAATAGAACTAAGGCCTTTTCTTTCTGGGCCAGATTTTCACCTTATATAACCCTTTATATACTTCTGACTACTCTGTGTTCATTATTGTAGCAGAGTAGGCGTATACTGTAGAAGGTTTTGGAAACCTAACAGAAATTGACCCTGTCTAATCCAGCATGGTGGTTTCCTGTTGGGTCAAAGCAGAAAACTGAAGAATTAGGTCAATTTGACTTTCTGGACAGCTGAACTTCTCAACTCTAATTTTAAAAACTACACTACACTGATACAGCTAATCAGACAAAAGGTCCTCGCGTATTTTATTTAATTTAAATCATCTGTTTAATTCTGTCTTTAATAATTTTGCAAAGAAGGGTATGTGTGTATTTTAATATAGCCTGACCTGAATTTATATGTTTTTAGTTTTAGTATTTAACACTTTTGTAACAAATAAACCTTTTTTTAAAACAAGCTTCACACAGTGTCATGTAGTTATTTTCACTTTGGATGTGAATTGCTGAAGTAAACTTGGGAATCCTGCCTTGTATTTCTCAAGCATAATTG EMBV3_16923 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08846 CACGGTGACGATTCCCCTTACGATAATGAAACCCCATGAGAAAGTTGAAGTACCGACTGG Gene GeneID:281872|ITGA2:NM_001166499:52_cdna Constitutive 0 NULL GeneID:281872 20 GENE ITGA2 NULL integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) EMBV3_27294 TGTACAAGTGTTTGCAGCAGGGGAAAGATGAGGCTGCTGTTCTCCAAGAGGAGGCAGACA Gene GeneID:514786|CCDC107:NM_001075681:50_cdna Constitutive 1 NULL GeneID:514786 8 GENE CCDC107 MGC134555 coiled-coil domain containing 107 EMBV3_11121 TCCTGGTGGAAAACTTCTACAAATACGTCTCCAAGAGTTTCCCTACCTGTTCAGTCCATC Variant GeneID:505679|S100A16:NM_001075218:79_cdna 227^708 2 EMBV3_21118 GeneID:505679 3 GENE S100A16 MGC140605 S100 calcium binding protein A16 EMBV3_33434 TCTGGCCCACAAACAGGCACCAGAGAAGCATATGGCACCTTGAACTCATGCCTATTACAG Gene GeneID:767859|GPR89:NM_001076970:4_cdna Constitutive 0 NULL GeneID:767859 3 GENE GPR89 GPR89A G protein-coupled receptor 89 EMBV3_42697 GACAGTCGTCTGGCCCCAGTGATTAATTTGTATGTGATCCAACCAGAGGGAAGCTCAAGG Gene BVV0102_044379 + 0 NULL GK000006.2:7590934-7651872 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16341 TGCATTTTGACGGCTGGGAATGTGAAAGAGTGTTGTGTGCCCAAGAAGTGTGGCTTGACC Gene BVT0102_165650 + 0 NULL GK000012.2:84270754-85610286 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035890 TCONS_00037479 TCONS_00035891 2 XLOC_021018 XLOC_021395 NonCoding TCONS_00037479 XLOC_021395 NonCoding NonCoding - 12:85360674-85362969 - TSS27035 2119 5 TCONS_00037479_5 48 2 0.0771578029642546 0.00029270682625754 0.000481895751800931 0.000510125071937874 0.00102090062088844 0.000406522952262886 0.000197782025396929 0.0006233551901143 0.000371220170754597 0.000785410918806382 1.74772988729395e-05 1.11500475309042e-10 1.2306910373124e-09 7.17004222230749e-05 0.000356729479824355 0.000222465002468673 6.28771478638015e-06 0 0 0.000690906952244651 0.000615388830120375 0.000153323912571324 0 0 0 0.000756720118131644 0.00117855245266458 0.000470468222364144 0 0 0 0 noncoding 0 0 0 0 -0.0662369768591873 0.589690219991513 0.0117299024316005 0.864910990651594 GAGTTTAGCAAAGCTTTAATTTAAAAGAGACACAGGTGACAGCTCTGTTATTTTTGCACGTTCAGATGCATCCGCAGCTGGTTTTATTTATCTCAGCCGTATATGCCCGTATTTGTTGTAATTACTAGTCTCGGATGTACTTAAAGATAAATATCTCAAATGCCTATCCGGCTAAATTAAATTAAGGAAATCACACTTTTCACCCGCACCCACTTTGGCCCTGCTCTGCTGTGGATAATAGCAACGATTTAAAAGTTTGTGCCTCATTTCATCTCCCCCATCAGAAGTGCTTCCAAAGAAGTCCTGGGTTTCCTATCTCTTCCAACTCAATATGCTCCATAACGGCATTGTTCCCTCTAGATTCAACACAGCAAGAAGGATTTGTTTCAGAGCTTCTTACCTGCTCATAAAATGCTTTTAAATGCATTTTGACGGCTGGGAATGTGAAAGAGTGTTGTGTGCCCAAGAAGTGTGGCTTGACCCGTTTTAATTCTTCTCCCAGTTTGTCCTTCAGTTTGGGATTGCAGACTTGGCTTCGGTGTTCGTTTGTTTACCGTTCACTTGTGGCTCGTTCACCGTGAGCAGTGTGTGAAACAACAGGGCGAGGGGTTCACGTAACGTCAGAGTCAGCATGGGGAAAATCAGTGAGAGTCTGGAAGTTTGGGAAAGGGGAGAGAGACATAATAAAATGAGAAGGCAGATTAAGAAGATGAAGTTGCAGAGTTTTTTAAAAGGAGTTTGCTTGGCAAGCCGCACAGAAGTTTGCCCATGAAAATGTCAAGAAGATATGGTATTTGCCTCCCAAATGCTTATACACGGTCCTTCAGGAAAAACAGTGAATCTGTTTGCAGTAGTGGCACTCGGTTGACTTGTTTTCAGATGGGAAGACAGAGTTTTATTTACTTACTTTAAAATTTGAAACAAGACCTGATGTGCACCTCTGTTGAGGAGTTGACTGGCTTATGAGTAAGAATAGTGGCCTTTGCAACCCCGGCGTCAACACTAACTTCTGCTCCTCTTGAGATCTGAGTATGTTCATTAATGACCTGGCTGTCTGGAAGGAGCAGCTGCAGAGCAATTCCTCCAACAATATTTGGGAGAATTAGACCGCCTGTTAAGAATGAACGAGAGAAAATGTCAGTCAACATACTTATACAATGAAGAAATATTGAATAGGGATCCTCTCCAAATGTCTCTCTGAAGTGGATATCTAATAATGAACATTGAAGAATTCTGAGTGGATGGAAGCCAAGTCCTTTTCGAGAAAGACCGTCAGATTGATTTTGTCTGGCTTAACGTCGTGGTTACTGTTTGACTGCCTTGCATTTTTTCTAAAGCAAATTTTTTTTTGACCCCCCTCCACCAACCCATTCATTTAAAGGGACTCTCTTCAGAAAGACTTGTGATTTTCCTCAGCACAATAGACTTTGCCTGACATTCACTCTCCTTAAATAAATGATATTAAACCCTAGTCCTGCTTCAGGTACTTAACTCAGCAAATCAGCCTTTGTGATAACCCCCTGGAGGTGAGATAGATTTCTGGATTTGGATCTGCTGGCAGTGGGATCATGAGCTTAGTCACTAATTCTTTGCCACCACTTCATCAGTTAAAGTACACTGTTTTAATTCTTTATTTGTAAACTTGAGGGGTGGGGATGGCGTAGGTGCATGACAGGTGATAATAGAGATTCTTAGCTGCAATGCTTATTGAAATATGTGAAGCTATACTTTAACACATTTTAATAATTATTGGGCGTCCCCCTAAATAACACTAAATCTTTTCAATGAAAGCTCTTGAAATTATAGGAAAGTCAAAACAAGGTCTTGTTTACCATCCATTGTATCATAAAAGCTGCCAGGTGTGTTCAAACAGGTACTAACTTTCAGTTTTAATTCAAGATAAACATTTTAGGATGTAATGAATTGAGTAAATCTGAATGCTGAGTTCTGCCCCTTTACGAATGATTAAGGGGATGAACAGAAGTCTCCTTTGTCCTACACACTTCTACTTTCTCTGCTCCTCCCCCTTCATCTTCACTGTCCGCCTAGACAAACTTGATCTTGACCTGGGAAGAGAAACATAAACATCATTTCTCTTGCCTCTCTTCCCACTTTCCAC TCONS_00037480 s 3' 248670 TCONS_00037480 s 3' 247318 EMBV3_09018 TGGTCATCTGCTGCTGGATGGCGGCACTTATGACTATCCTCCCACCACTCAGCTTAGATT Gene GeneID:787720|LOC787720:XM_002687460:278_cdna Constitutive 0 NULL GeneID:787720 5 GENE LOC787720 NULL similar to olfactory receptor, family 6, subfamily C, member 68 EMBV3_38745 TTCTTCAGAATAAAAAGGAACCTGGGCCTGGATTCTCACAAAAGAGGAAAGCTCCTGCAG Gene GeneID:540574|TOPBP1:XM_002685092:52_cdna Constitutive 0 NULL GeneID:540574 1 GENE TOPBP1 NULL topoisomerase (DNA) II binding protein 1 EMBV3_05508 GTGAAATGTTCATCACCAATGATCTTAATAGCATAAAGACCACATTATATGAGGAAACAC Gene GeneID:508028|SLC28A3:XM_002689809:117_cdna Constitutive 0 NULL GeneID:508028 8 GENE SLC28A3 NULL solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 EMBV3_23553 GAAATGGAATACACTCAAGATGGTGCTGGGTATGGGCACAGCATGGCGTAGTTAAGACCC Gene GeneID:505349|LOC505349:XM_002687015:61_cdna UTR3_Alt 1 NULL GeneID:505349 4 GENE LOC505349 NULL similar to T-cell receptor beta V3 EMBV3_01178 GATGAGGGACCAGGCCCTCAGATACCGCAGCATCAGGGAGCAGGAGGCGCTCCTGGGTCG Variant GeneID:522802|ACCSL:XM_002693559:222_cdna 369^494 2 EMBV3_15049 GeneID:522802 15 GENE ACCSL NULL 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like EMBV3_42718 GTATACATTGAAGCAGGCTGGCACAGATGGTGGGAGGAACACCACAGAAGTGTGTGCGAT Gene BVT0102_429122 + 0 NULL GK000005.2:30251718-30281519 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198358 1 XLOC_120013 NonCoding TCONS_00198358 XLOC_120013 NonCoding NonCoding - 5:30278107-30278688 - TSS147926 581 1 TCONS_00198358_1 85 0.943201376936317 1 0 0 0 9.55661909734289e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00171452294190211 0 0 0 0 0 0 0 0 0 0 0 0 0 NM_174045.1 DSG1 Bos taurus desmoglein 1 (DSG1), mRNA. 9e-18 95.1 91.18 0.110154905335628 0 noncoding 0 0 0 0 -0.00145216423906119 0.988955955639564 0.0232813161160942 0.650497375137892 TCTATTGCTGTGTAACTAAAGTGTTTTAAAGCAACAATAAACATTCATTGTCACTCGGTTGCTGTGGGTCAGGAATTCAGGAACAGCTTAGCTAGTTCTGGGTCTGTATCTCCTGAAATTTCTGTCGCTTGAAAGCTTGACAGGTCCTGCAGGATCTGCTTTCCAGGTGGCTCATTCACACTGGCTGGCAAGTCAGAGCTGGCTGTTGACTGGAGACTCAGGTCCTCTCCTGAGAGGGCTCGCCACCTGGCAGCTTGAACCGCCTCAGAACCTGTGCCTGGCTTCCCTCGGAGCTAGTGAACCAGGGAGCCAAGGAGGAAGCTACAATGCCTTTCATGACCAAGCTTCATAAATCGCACACACTTCTGTGGTGTTCCTCCCACCATCTGTGCCAGCCTGCTTCAATGTATACAGGGTGTGAATGCCAGGCCAGGAATTTTTTAGGGGGAGGCAAGCATCCTGGAGAATGGTTACCACAGGCTGAAGTTGCCCCACGCGTCTCTCATTTACAATTTTTGAAAGTGAAAGAAAGTGAAATCACTCAGTTGTGTCCGACTCTTAGTGACCCCATGGACTGCAGC TCONS_00194501 . 3' 2232 TCONS_00194501 . 3' 2812 EMBV3_33977 CAGGAGGGTGATTCACTTTTTTGTCTTCACAGCATAGTCTCCATTTTATCCTTCTTACTG Gene GeneID:533642|PLOD2:NM_001101149:44_cdna UTR3_Alt 2 NULL GeneID:533642 1 GENE PLOD2 NULL procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 EMBV3_19095 GTTTGCAGGGTCTGAGTCCACGTTCAAAAACTGTGAACCACTTCCTCTCACCTCCTCCAG Gene GeneID:535185|FBLN5:NM_001014946:271_cdna Constitutive 0 NULL GeneID:535185 21 GENE FBLN5 MGC128763 fibulin 5 EMBV3_26884 GGCGGGATTTGAACCCCAGAGTCGTCGTGAGTGAAGGCATTCCCATGTCAGGATAAAGAT Gene BVV0102_306013 + 0 NULL GK000003.2:13629628-13743910 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02813 AGGGCAGGAGAAGAAAAGAGGAGTTGGTGAAGGTGTTACCTCATTTGGAAAGCCTTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06734 AATGCCAATGGTTATGGCTGATCAACACAGACAGTGCAATGCTTGCTGGACAGTGGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36008 TTCCGCTCTGTGTATGTAAGCTGTAAGCAGACACCGGCTCTCAACGTGGCCGCCGCGTGT Gene GeneID:506974|GATSL3:NM_001081514:44_cdna Constitutive 2 NULL GeneID:506974 17 GENE GATSL3 NULL GATS protein-like 3 EMBV3_00423 CTTCCCTTCAACGCCGTTTACTGCGCCAGCAAGTTCGCGCTCGAGGGTTTGTGCGAGAGT Gene GeneID:353107|HSD17B1:NM_001102365:49_cdna Constitutive 0 NULL GeneID:353107 19 GENE HSD17B1 EDH17B2 hydroxysteroid (17-beta) dehydrogenase 1 EMBV3_13077 GCAAGCCAGGCGTTCAGGTAACGAACTGTACCACCTGAGTTCACTGTTGTTGTCTTTTCA Gene GeneID:615138|TDRD12:XM_002694999:210_cdna Constitutive 0 NULL GeneID:615138 18 GENE TDRD12 NULL tudor domain containing 12 EMBV3_24853 TCACTGGTACTATTCCTGTGATATATCAGGCCTAAATCTGTCATTGTTGGATTAATTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19108 GTAAGCATGTGAGGAAGCTGCGTGCCATCATCACTCCTGGGACCATTCTGATCATCCTCA Gene GeneID:782668|LOC782668:XM_002692944:5_cdna Constitutive 0 NULL GeneID:782668 15 GENE LOC782668 NULL similar to ribosomal protein L6-like EMBV3_25366 GTCTCGGTACCCAACATCGACAACCCTGATGAGCTTGCCTACTATATCAGCATCATGTTC Gene GeneID:509034|LOC509034:XM_002691069:5_cdna Constitutive 0 NULL GeneID:509034 10 GENE LOC509034 NULL similar to Feline leukemia virus subgroup C receptor-related protein 2 (Calcium-chelate transporter) (CCT) EMBV3_06368 CAGGAGGCCGTGAAGAAGGGCTCGACCGCGGCCTCACTGCTGATGCAAGAATAGTCATCA Variant GeneID:505050|PSMA7:NM_001034233:862_cdna 162^288 1 EMBV3_43247 GeneID:505050 13 GENE PSMA7 MGC126929 proteasome (prosome, macropain) subunit, alpha type, 7 EMBV3_10189 ACTTCTTGGAGATGTGGATCGTCTGGTGTCCAGGGAACTTGAACTTGGCTCTGAGGAGGG Gene GeneID:535410|WDR78:XM_002686332:123_cdna Constitutive 0 NULL GeneID:535410 3 GENE WDR78 NULL WD repeat domain 78 EMBV3_25462 TGCTTCTACTTCCATGATTCCATTCAGTCCATACCACAGCGATAGGAGACAGGCCAAGCC Gene BVV0102_100818 + 0 NULL GK000003.2:99618465-99641130 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170886 1 XLOC_103675 Coding TCONS_00170886 XLOC_103675 Coding Coding TAL1 3:99610186-99620511 = TSS127572 4101 1 TCONS_00170886_1 328 3 0.603060829135994 0.00131379032075439 0.000480247613902892 0.000909378341082952 0.00099625465720154 0.00158432317591522 0.000116880262486516 0.000750826910563503 0.000565366939125238 0.000284744146816065 2.0065799227583e-06 0.000149598172846467 8.71905666756308e-07 7.20018709538503e-05 1.1905687078219e-11 0.000275229980009467 0 0 0 0.000702930060303618 0.00148177598346643 0.000218371483778345 0 0 0 0.000795728855053276 0.00114933416693995 0.00043290012106971 6.08958342522303e-05 9.47009050588946e-06 0 XM_005204735.1 TAL1 PREDICTED: Bos taurus T-cell acute lymphocytic leukemia 1 (TAL1), 0.0 7395 100.00 0.999512314069739 XM_005271158.1 TAL1 PREDICTED: Homo sapiens T-cell acute lymphocytic leukemia 1 (TAL1), 0.0 2818 78.81 0.811265544989027 TCONS_00170886_1 sp|P17542|TAL1_HUMAN TAL1_HUMAN T-cell acute lymphocytic leukemia protein 1; 0.0 511 93.07 0.996951219512195 1 coding 0 0 0 0 -0.098128366858146 0.4632199340992 0.0261500718034606 0.627147536676986 ATGACGGAGCAGCCGCCGAGCGAGGCGGCACACAGTGACCCCCCGCTAGAGGGACGGGACGCGGCCGAGGCCCGCATGGCCCCCCCGCACCTGGTCCTGCTGAACGGCGTCGCCAAGGAGACGAGCCGCGCGACCCCGGCGGAGCCCCCGGTCATCGAGCTGGGCACGCGCGGCGGCGGCCCGGGGGGCGGCCCCGCCGGTGGGGGCGGCGCCGCGCGGGACTTAAAGGGCCGCGAGGCTGCGGCGGCCGAAGCGCGCCATCGGGTGCCCACCACAGAGCTGTGCAGACCACCCGGGCCCGCGCCCGCCTCGGCCCCCGCGGAACTGCCAGGCGACGGCCGCATGGTGCAGCTGAGCCCGCCCGCGCTGGCGGCCCCCGCCGCCCCCGGCCGCGCGCTGCTCTACAGCCTCAGCCAGCCGTTGGCCTCGCTAGGCAGTGGCTTCTTTGGGGAGCCAGATGCCTTCCCTATGTTCGCCACCAACAACCGAGTGAAGAGGAGGCCCTCCCCTTATGAAATGGAGATTACTGATGGTCCCCACACCAAAGTTGTGCGGCGCATCTTCACCAACAGCCGGGAGCGATGGCGGCAGCAGAATGTGAACGGGGCCTTCGCTGAGCTCCGCAAGCTGATCCCCACACATCCCCCAGACAAGAAGCTCAGCAAGAATGAGATCCTCCGCCTGGCCATGAAGTACATCAACTTCCTGGCCAAGCTGCTCAATGACCAGGAGGAGGAAGGCACCCAGCGGGCCAAGCCTGGCAAGGACCCTGTAGTGGGGGCTGGCGGAGGGGGTGGGGGAGGAGGGGGCAGCGCGCCTCCTGAGGATCTCCTGCAGGACGTGCTCTCCCCGAACTCCAGCTGTGGCAGCTCCCTGGACGGGGCAGCCAGCCCGGACAGCTACACAGAAGAGCCAGCGCCCAAGCACACAGCCCGCAGCCTCCATCCTGCCATGCTGCCTGCTGCGGATGGAGCCGGTCCTCGGTGATGGGTCTGGGGCCACGCGGGATCAGCCGGGCAGGTGCCCTCAGGCTGCTGGGACCATGGGCTTTAGGGCAGGTGGGGTGAGTGTTGGGCAGCTCTGAAGTAGGACATGGACTTGATGAGCTTTCCTTGATGTCTGAACTCTGGGGAGTCCCAGCCCCTCTGGGGCTGGTTTTCCTGTTTCCTGCCTCAGTAGGAGACCAGTAAAATGGAGCAAAGTGGTAGGTACTTTTTATGAAGACGGCACAGTCTTCCCCTTTTTCCAGTTCCCTAAGACTTTTCAAGTAAGAGGCTCAAGGGGCATTGCTTTTGGCCTGGAGCACAGGAGCCCTGTCTTCGCTGAGACCTGGGCTTGTCAGCTCTCTCCGAGGCGTCCGGCAGCCTCTGCCTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGGCTTTTGTGGCCACACTGTCCAAATATATAGGTACCCAATAGCTCCCCATTTCTTGAGCCTCATCTTCACCCAGGCCCACATTGGTCCATCCAGCTTGCCAGCTGCTGCAGAGAGTCACAAGCCCTGAGGTGCCTTCTTCAGGGCCTGGCTGAAGAAGATGGCCAGTGGACAGCCTGCTCTCACCTAGCTGGGCCAGAGGGTCAGAAAACCCAGTAGCCCTTACTTCTTGCCCTGGGGATCTAAGCTCTGCTTTCTTCCCACTGAGATTTGCCTTCCTCATGCTTGTGGCTGTGGGGACCGAGGCTGAAGCTGTGAGAGTGCCCTGTAGGTTTCGTTTGAAGGCAGACAAAGGAGAAATAGTGAAATAGAGCAAAAGCTGTTTGGGGCACATGGGCTTCAAATCGTGGCGGTGTCTCAGAGCTACCTGCCTGTATTCCCAGTGACACGTTGCTGTTTGTTGGGGGCATGGATGTCAGTGTGCTGATGGGCTCTGTGCTGGTCTTGACAGGAGATGTGCAGCCCCGTCTGGTGTTCTGGCTGTGCAGAGGGACCTCCCTGTTGCAGGATGTCTGTTGTCCAATGGTCTGGGCTGTGTTCTGAAACCGAATCGATGACAAATTCTGTCCTATGAATTCCTGGTATTGGGATTTTGCTTGACTTCAGTTACTTTGGGACCTCAGGGTCTTGATATGAGCCAGGATCCAGCCCCACCTCTAGGCCCTGAGGAGCCCAGTGAGAGACCAGTTGAGACCCACGCACATTCACTTTCACTTAGCAGAACCTTCAACATCCCTGAGTCTGCAAATTTCAGGCATCACGAGTGTGTATGGGAGGCTGGCGTAACACATGAGGAGTGCTCCCCGCCAGAAGTTGTACATGACATTTTTGTAAATCAAATCCTTATCCTTCATCTTTTAAAGAAATTCTACTGCAAGTCCCTTGGTAATGTGGAGAATCCTTTTGTAGAGTGGACCTCTGCCCCCTCATTGATCTCCTGTGTCAATCCAGATGGTGGGATGTGATTTTCTTCAGGTGAGGCCTGCCTGTGACCCACATCCCAGGCCCATGGAGCAAGCTGCACACGAGTCCTGTATACCTGTCACTGTGTCCTCAAGTCACCCCGGCCGGCTCTGACGCTCCGGCTTTACCCTGTCCATAGCGACGTGGAAGAACCATCGCTGCAGCTGTCGGGAAAGGTCCTCACGCCTTGTGGGCTCCAGCTTGGTGGTTTGCCCTTACTGTGGCAGGGCCTCGGGGACAGTCACGTGCACACAGAGATGATCCCTGCACTCCCCCTCTTCCTTTTAAGTTGTGAGGTCCAGTTCGTGGGAATGGAAGCCGCATGGTTAACCCTTGTAGCACTCTCTCCCATTTCAGCACCAACCCCCATTATATTTTGACAAACATTTGGATGGGTTCTTTTCCAATACTTGGAAGCTCCTGTAGGAATCCCATCTGTCCAAAGATGGAACACCTCTTCTAGGTCTTAAGGCTGTGTCTGCTTCCAGTGGATTAATTTACCTGGGAGTGAAAAGTGGCCACAGTGAGCGTGGTGGATGGGTTTTAGGAGATGGATTATACATTCTAACAGGAGCTTGAGCTTCTGGTTCCCTCTTCTCTCAGACTTGCAGTGTGACCTGGTAAAGTTCTCTCTCTGGATGTCTTTCTCATAAATACCCTGGCTTGGCCTGTCTCCTATCGCTGTGGTATGGACTGAATGGAATCATGGAAGTAGAAGCATTTTGAGACCATAAGGAACTCTGTTGCTCTCGGTATCATTCCTGCAGTGAGATTTCTCACCCAGAGACCAGGACCTAGACAGTGGGCCAGACTGCTTCTCTGTGCAGTATTTGGATAATTTAGCTTCTAAACCACTTTAGCCCACTTCAGGATTTTCTAGATTATCCTCATCTTTCCAGATTGACCTCATTTCAGTCTCATCCCAAAGCAAGGCATAGAAGGGAGTCTACAAGAGAAATACGGGATTGTGGGCAGAATGTGTAAAATGTAGTACAAAACAGGCCTAGGGAGAGATAGGCAAAGCTTTGTGACTTTGTTAAGAACCAGAGAAGATCCATCATTTTCACCTTCATTTCCAGCATCTCTCCCCACCATGCTCTTCTTCCTCTGCCTCCTTTTCACCCATGAATATTCCCCATCCAAGAATAATATTTGTCAAAGAAGGAAAAATGGTAAAAAACACGAGGAGGATAAAGATGATTTTAAGTGACCGGAGGGAATCATGTCTTTTAAGAAACATTCATATTTTATTTGTAGTGGCAAACGACAAGATGGTACAACCTTTATCCTTTTCTGAAAGCAAAACAAAGGGCACAGCATCTGTAGTCAGCCCACGACTGTCCTGGCCTTTGGGGGTGGTCTCGTCGTACTTGTGATTTCAATGGTACGTGGCCCCCACCGAAGGCTTGTCCCCAGCCCATGTACATAGCGCATCATTCCCGTGGGCGGGCCCAGCACTTTCCGTCAATGTTGTACTGTACGTGATGCGTTGCGTTGGTCTCTGCATTTTTCTGCAGAAGAGGAGTAACCGCTCCAGGTACCTTGACCTTTGTACAGCCCAGAGGCCAACACTGTGGGCGTGTGACTCTTAGCGACAAAACCCATGTGGTGATGATGTGTGTATATATATAAGGATATATTGGGAAGATTTCTAAATAAAAGTTTTACAGAGGGC EMBV3_35449 TTACCACACGTACACGGCCTCCACAGTCTATTGTGTGTCGGGTTTCACAGAACGTATTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20285 GCTTCTGGGGTTTGTGGTTGTTCTAGACACAATTCCTTTACCCTTGCTGTATCTCCTTCC Gene BVV0101_015042 + 0 NULL GK000005.2:28199955-28211639 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198253 1 XLOC_119910 NonCoding TCONS_00198253 XLOC_119910 NonCoding NonCoding - 5:28206776-28207430 - TSS147821 654 1 TCONS_00198253_1 41 0.264525993883792 1 0 0.000228842008511151 0.000153645789537849 3.53745559157731e-05 5.07898972900248e-05 1.7614885824677e-05 0 0.000285344020508028 9.04391697708334e-06 0.000120644200272445 0.00010695144909313 8.16733681364548e-06 0 0 0 0 0.00125192746968566 0 0.00103586215340562 5.4823701253103e-06 1.09960754720744e-05 0 1.13465920851245e-05 0 0.000538314874767013 2.11880032859101e-05 0 0 0.000190928715827896 4.45376879412803e-05 0 XR_232352.1 LOC101904240 PREDICTED: Bos taurus coiled-coil domain containing 3 pseudogene (LOC101904240), misc_RNA. 1e-28 131 83.97 0.191131498470948 NM_014191.3 SCN8A Homo sapiens sodium channel, voltage gated, type VIII, alpha subunit (SCN8A), transcript variant 1, mRNA. 0.0 1005 94.63 0.995412844036697 0 noncoding AGGAGAGTTGAAAACAAGATTGACGTAACCCTTTATTGCAAATTCTAAAGTAAAAAGATGTACAGTACAAAGTAAAATTGAAATTTCAGACTATAAACTTCCAATCCACTTATACATTCTCATTTCTCAAGCACTTCTGCCATTTCCGCATAAACGGAACAGGGAACAAGTCGAGTGGGTGAGGGAAGGAGATACAGCAAGGGTAAAAGAATTGTGTCTAGAACAATCACAAACCCCAGAAGCAAGTGAAAGGAAAGACATTTTCTCGACCTGCTGTCCTGGTGATGAGAAGCGGGGGTGGTTGGAGCAGTGCAGTTTAAAATGGCTCTCAGAATAGCAGCATTTATGGTACCATTTCATCTTCCGGAAGTCCAAATAAATACTTTGCCCTTCCCTAGTGCCTTTGCCTCTGTATCTCAAAAAACACTTTACAAAACATTTAGTTAAAGCCTCACAACACCCCTGTGAGGTAGGTCAGTATTATTATCCCCATTTTACAGACGGGGAAACTGAGGCACAGAGAGGTTAAGTGACTTGCCCAAGGCCACACAGCGAGTCAGTGGTTGAGCTAGGGATGGAACACAGGAGTTCTGTCCCTTCTCTGGAACCACTGGACCGCGCTCCCCTTTACCTATATACATTCTTCACACACAC TCONS_00194416 TCONS_00194414 TCONS_00194421 TCONS_00194417 TCONS_00194420 TCONS_00194415 TCONS_00194418 TCONS_00194419 TCONS_00194422 TCONS_00194423 TCONS_00194424 . 3' 625 TCONS_00194416 TCONS_00194414 TCONS_00194421 TCONS_00194417 TCONS_00194420 TCONS_00194415 TCONS_00194418 TCONS_00194419 TCONS_00194422 TCONS_00194423 TCONS_00194424 . 3' 1278 EMBV3_43387 ATTGGAAAAGGAACAGGTGAGGAGAGTAGGTTGGCTGTCTCAGAGGGGAGAGGTCCTTGT Gene GeneID:538522|LOC538522:XR_083799:137_cdna Constitutive 0 NULL GeneID:538522 11 PSEUDO LOC538522 NULL similar to aspartic peptidase, retroviral-like 1 EMBV3_15974 GGCCTGTTTCTCAATGCCACCAGGCTGTCCCATGACATTTTTGGCCTTTCCTGGATAATG Gene GeneID:100298767|LOC100298767:XM_002697542:307_cdna Constitutive 0 NULL GeneID:100298767 23 GENE LOC100298767 NULL similar to prolactin EMBV3_36309 TGGACCAGCCGTGTCCTGTGGGCCCCGATGGACTGCCTGTGCCTGGCTGCTGGCATAAGT Gene GeneID:613347|COL23A1:XM_002689036:105_cdna Constitutive 0 NULL GeneID:613347 7 GENE COL23A1 NULL collagen, type XXIII, alpha 1 EMBV3_18436 GCAAGGAAGAAATTGTTCAGTTCTTCTCAGGTATATCGAAATCTTTAAGAGCAGTCGAGC Variant GeneID:541202|HNRNPH1:XM_002688484:55_cdna 467^605 1 EMBV3_23571 GeneID:541202 7 GENE HNRNPH1 HNRPH1 heterogeneous nuclear ribonucleoprotein H1 (H) EMBV3_09444 CCAGGACTCTGGTCTGATGAAGTTTCCATTGTCCACTGCGATCCTATGCCATCCACGTGA Gene BVV0102_052935 + 0 NULL GK000005.2:68645775-68700509 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192412 TCONS_00192416 TCONS_00195441 TCONS_00195442 TCONS_00192414 TCONS_00192417 TCONS_00192418 TCONS_00195440 2 XLOC_117173 XLOC_118045 Coding TCONS_00192412 XLOC_117173 Coding Coding CHST11 5:68385345-68650393 j TSS143997 6420 1 TCONS_00192412_1 347 0.103894080996885 3 0.975789199651383 9.20841499668891e-05 0.00015290200931385 1.84652562357527e-25 3.39982394943192e-18 8.34154048243816e-07 2.94565910095844e-54 3.60354774288239e-05 4.91241348721733e-14 4.74342357876455e-17 1.21250223539263e-16 3.62311557999892e-06 8.61166893159382e-12 7.49800160922856e-23 1.03251346468139e-23 1.22022210861477e-12 0.000470235911387072 2.86879467739187e-05 0.00239603651234945 2.39562274494677e-109 1.65775220537574e-05 2.30186868900742e-37 9.57137490574388e-12 1.06703153092813e-27 8.88673265645151e-05 3.49204091490899e-15 1.43008515521579e-05 3.72752933417323e-24 6.51980696692413e-06 6.12618184487633e-05 0.000109177208731834 XM_005206632.1 CHST11 PREDICTED: Bos taurus carbohydrate (chondroitin 4) sulfotransferase 11 (CHST11), transcript variant X3, mRNA. 0.0 1.005e+04 100.00 0.867601246105919 NM_001173982.1 CHST11 Homo sapiens carbohydrate (chondroitin 4) sulfotransferase 11 (CHST11), transcript variant 2, mRNA. 0.0 4569 77.78 0.885202492211838 TCONS_00192412_1 sp|Q9NPF2|CHSTB_HUMAN CHSTB_HUMAN Carbohydrate sulfotransferase 11; 0.0 717 97.44 0.997118155619596 1 coding 0 0 0 0 -0.0246652528785337 0.846734849028863 0.00392770841848472 0.93947174644802 AGGGAGGGGGCCGGTCCGACAGCCACAGCGGCCAGCGCAGCGGCAGCGGCGGCGGTACCACCACCAGCATCACCGCTCGCACTCCAGTCTCCCGGCCCGCGAGGAGGCAGCGGCGGCCGCCGGCGGGAGCGGAGGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGCGAGGAGGAGCCGCGGGAGGAGCAAGAGCGCGCAGCCGGCGGGTCCACGCATCTCCGCACTTCCAGAGCAACTCCGGCGCCTTCCGCACCCCTGCCCGGGGCTGGGGGCTCCGAGAGCAGCCGCGAAGCCAACCCCTATCCTCCCAGCGATCCTTGCCCAGCCCTGTCCTGCGCCTCCCGGGCTCCGCTCCGCGCCGCGGGGTCCGCTCCTGCGCTCCGGGAGCGCCTCCCGGACACCCGGGTTCCCGTAGCCAGGACAAAGCCATGAAGCCGGCGCTATTGGAAGTGATGAGGATGAACAGAATTTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCAAATCATGCGGAGGAACCCCTTTGGTGTGGACATCTGTTGCCGGAAGGGGTCCCGAAGCCCCCTGCAGGAGCTCTACAACCCTACCCAGTTGGAGCTCTCCAACACGGCAGTCCTACATCAGATGCGGCGGGACCAGGTCACCGACACCTGCCGGGCCAACAGTGCCATGAGCCGCAAGCGGCGGGTGCTGACCCCCAACGACCTGAAGCACCTGGTGGTGGATGAGGACCACGAGCTCATCTACTGCTACGTACCCAAGGTGGCGTGCACCAACTGGAAGCGGCTCATGATGGTCCTGACCGGCCGGGGCAAGTACAGTGACCCCATGGAGATCCCGGCCAACGAGGCGCACGTCTCGGCCAACCTGAAGACCCTCAACCAGTACAGCATCCCGGAGATCAACCACCGCTTGAAAAGCTACATGAAGTTCCTATTCGTGCGGGAGCCCTTTGAGAGGCTGGTGTCCGCCTACCGGAACAAGTTCACACAGAAGTATAACACCTCCTTCCATAAGCGCTACGGTACCAAGATCATCAAGCGGCAGCGCAAGAACGCCACGCAGGAGGCCTTGCGCAAGGGCGACGACGTCAAGTTCGAGGAGTTCGTGGCGTATCTCATCGACCCTCACACGCAGCGCGAGGAGCCCTTCAACGAACACTGGCAGACGGTCTACTCCCTGTGCCACCCGTGCCACATCCACTACGACCTCGTGGGCAAGTACGAGACGCTGGAGGAGGATTCCAATTACGTCCTGCAGCTGGCGGGCGTGGGCAGCTACCTGAAGTTCCCCACCTACGCCAAGTCCACGAGAACTACTGATGAAATGACCACAGAGTTCTTCCAGAACATCAGCTCGGAGCACCAGACGCAGCTGTACGAAGTCTACAAACTCGATTTTTTAATGTTCAATTACTCAGTGCCAAGCTACCTGAAATTGGAATGAAAGTGGGGGGAGGGTGTGGGCGGGGAGAGGGGAGAGAGAATCGTGCTTTTTTTAATTTAAGATTTTTATTTGTCGAAAAGAATTATATGGATATTGGGTTATTTTGTAAATTAATATTTCTTTGGGGATTGATGCTGCGAGCAGCATGGTGAGAATTATTTAAATCCTTACTAGGGAAGGACGGCTGTCTTGGCAGGGGACTAGGATGGGTGTCCTTGTTTTTTTAGACGTGAATCCCATGACACTGTCTCAGAGGTTTCTTTGTGTTCTGGTGAATTCCATGAATTGTGCATTCCATAAATGCTAATTAAGTTATTTATAGTTATTTAAACATGGTCTCTGTATAGATTTCTTTGGGGGGGCAACAAGATTTTAATGTCTTTTCCGAAGAAATCTATGTTTTCATTCTGTGCTTGCAAACAGCTCCTGCAGGGGCATGAATGTTCTCCTTACTAACCGCTCAGAGTCACTGTGATAACCATCGTGCTGTCTATTGATGCCACCATTCTTAAAATTCTGCTGGAAATAAATAGAGCCACCTTTGCAAGGGACTGATTCCAAAACTGATTTCAGTCATGTCATGCTAAAGAAAAGTGATTTTTTTTTTAATCCCAAGGAGAAAGCTGATTGTGGCTTCCCCCCCACCAGAATTAGCAATCTGGTAAAACAGGCTTTTGTACAGAAGTTTTTAACTGGCAGTGCCAGTTGTGATGAAGGTGAAGTGGCTGTTGCTTTACATGCAACACGTATTTATTGAGCAACTACTATGTGCTAGGCCTAATTCTAGACCCTGTGGGTAGAGCGTTGAACAAAATCAATAGTCTCAGCCCTCAAAGAGCTTTACATAGACATGCTGGACAATTAGCAAACCCCTGGTATCCACAGACTTAACCTGAGGTTTGGACTCTTCATGGACAACCCCAGGAGTATCGGATCCCTACAAATTCACATTTTTTATGGTCCAATTTGAAAACCACATGCTTGAAGCAGGCCACTTGAGTAGTCCAAGCTCTTTGCCTAACACAAGAGATGACCAATTCCCTGTCATGTGCCCATTCCAGTTTATTGGTAATATTTGCCTTTAAGCCCCAGAAGAGATTTGCCAGGCACGGCATGGAAGAATGCTGTAACTGATTAGTGATGTCTGCCTTGTTGAGGGAGAGGGAGATATTTGCCAACCGCCTCCTCCTGTCATTTCCAGCGGAGCATTCAGGTCTCCGCCTACAAGTGTTGTTTTTCTACTCTTTGCCATGTAAAAAAAAAGATTGAAATTTTGTGGCAGGACTCCGACATCGGAAGATTTGCAATGGCCTGGTGTTTCTACTCCTGGTGAGGGTCAGAGGCAGACTGTACACACAGGCACAGGCATACCCTCTCCCATGTCCTCCAGAGGCCAAGAGACCATCAGCGCCTTTGAGACCACCAGCAGTGAGCAGCAAGGACCGCCTTCTGGGATGGTAATCCACGCCCCTTTCCTCTGGAAGGCTGGAAACACTCCATTTCCTGTTCCTGGCTAATTAACGCCTGCACATGCTTCTCATTTCCGAGGCCATGGTTGAAGTTGGAGCCACCTCCCTCTTACAGCCAGTGAATGAGTTGGTAGCAGAGACTGTATATAATAATAATAATGATGATGATAGTGCTAATAACAGGGGGTGGGGTGGGGGTAAGTTTTGCTTTTTTGTTTTTTTTGATTCAGTGTATAGCACAGAGGTGAGAATATTCTAAACAAACAAAAAATGAATAATTTATTCACAGAAACTATTAAAACTGTATCAGCAAGCTCACAGCCAGCTCAGTGAGCAACAGCTGCCATGTCTCACTGAGAAAATTATTTTATTGAATGTGAGTGAGGCATGCACTGGAGAGGGTGGCCGAAGCTATTTATAAAATGTTGTATACCTTCTTCCAAGCTCTCTCTCCCCTTTGCGAAGGGCACAGTGACCATACCCTTGATGGATAGAGATGTATGCAAGTAGAGTGAGACTTCAGCTCTCTCTGGTATTATTCCTGGACCCTATGACCAGGCAGGGGAAACTGTCCTCAGAGACAAAGCTTCTACTAATGAAAGAGGTTTCTGGCATTTCCTGATAACGTGCTTCAGAGAACACAGGTTCTCCCCAGACACGAGTTGGTGTGATGCAAAATAAGGGTTTTGTGGTCAAGTGTCTTTGGGAAACAAAGCTAAGTCCATTTCCTTTCTGCAGGACTTTTCAGAGCCTTGATTGTGTGCTGTGTCTTGTAAATCCCCAGGAGCATCACTGATTGAGTCCATGGCATTTCCTGACCTTCCACGATCAGGATGCTGTATTTTACAGACTATCTCACAGAGCTAGCATTGCACTGTGTAGGCTTTGGTTAGGTTGTTTTAGCACATCTGAGGTCTTCTAGGATAAAAACTGCTTCCCTCACCCCTCCCCTCCAAAAATATCCAAAACACAGCAACAATAAAGCAACACCACTGTGCCCACCTGATTTATTATAGCAGTGAAGGTACTTTACCAAATGAATTCAATTTTTGCCTAAGTGCAATGGTTCTAATTCTGGATATTACATGGGCCACAGTTCCCTCCCTGCTGCAGGGAGCAGAGAAATCTTGAGTGGTGTGGACAGAAAGGAGGGAGGGGACACAAAGCCTCGGCTAGACCCCCAGCACTCTAGCTTAAGATTGCTCAATGCAAGCTGACTATTCAACCCTTAACGAGTGCTTCTTCAATTCTATAGTTTGGAATTGTTCACTATGTCCTTTTTGTTTTTTTAAGTGGAAATTCACATAGATTCCCCAAGCTTTGTGTTTCTGCGTCTCGTCCATTTTTTGATCAGCTATGATGCCTTCTTTCGTCTGTCTTCTCCCTCTAGTGAGGAAGAGTGTCCTTCAGGACCATACGGCAGTGTGGTTCACCCACGAAGGGCTCTTTCTCCTCCTGTTTTGTGTTCATAGTTTATTTTCTAATGCCATAAAAAACTTAAAATAGATTCAACCGTTTTTGCAGAATGTAGAAAGAACTCTGCGTCCTTGGTTAAAAAGAATCCATAGGTGAAAACGTGCCTGGAAAATAAAAGTTCTTGGTTCTTTTGTTCCTTTTTTTTTTTTTTTTTTTAAGAAAACTGAACATGCTTTCTGTTGCATGCTTAGCTGGAGAAAAGTACAGGCAGGTGTCCCATCTCCCAGCGACTTTTCAAAGGTGCTGCCTTGTCTTCAAAACCAGGTACAGAGTAGCATTTACAAGGACTTTCCTGCTTAACCTGTCCCTTTGGTTGGACAGCTCTATTAGCCACAGGGTTTGAATTCCTGCAGCTGCTCCAGACCCTCTCCCATCTCTGCCTCCCCAGCTGGTCTGGGAAAAAGGACAGTCTGCTGACCTGTGGTGTCTCAGAGGGAAGCCTTCCTTCCCACCTGTCCACCAGGTGAGTTTCACTGTCCTGCCTGTTCACGTGGATGGCATAGGATCGCAGTGGACAATGGAAACTTCATCAGACCAGAGTCCTGGTGGCGAAGGTGTGGAAACACCAGGGTCCAATCCCTGCTGGTAGAAAATTCCCAAAACAAAAGCTTAGCTGGTGGGGTCTGGACCAGTGCTGAGCTAGTGATTGCAAAAGTCCTGATTCTAAGCTAGCCAGATGCTGAGGGACTGTGTCCCTGGTGAGTGGGGCTCAGAGCAGATGTCTCACAGCCCAGCCCTCCCCTCCACATACACACATGTGATCTGAGCTGCCCTGCTCTGTGCGATCCTGGGGACCAGAGTCCCTTTCCCCTTCGTGTCAGCAGGACTGACATCACTCCCGCAAAGTCCCCACAGCCAGTATTTCCTCCAGCTTTTTTCCATCACAGCCAACTGGACCCTACGAACAGGCGGCAGGATCTTCTTCAATCAGCTTGACTCTCGGCCGTTAACAGGCGAATTTCAGTCTGCTACACTTTGTCAGGCACAGAAGGGGCAGCCCGTACTGTTTTCTTATGAGCAAGCTCAGTATGGCGTATGGACCTATAATTTAACATCTTTGTGGATGGAGTGTGATTTTTTTTTTTTACATAGTTGTATGCAGTAGAGGGCTTATAGAAAACTCTCCCTGTATCTTACTGTACTGTTCAAGAAAGCTGAATTCCACATTGCCAACAAAAGCGTGAAAATGTTCATGAACCTTCTTCCAGGAAAAGCCATTCAAGCCTGATTATTTTTCTAAGTAACTTCAATTAAATTGAAGAAAAAAAGAAGCTTCTCTCTGTGTATGGTCTGTTCATGGCTCATCGACATAAGACTATAGGGGTGGGGTGGGCTGTGTTCCTTAGCATGTGGGGGGCCCTGCTCATGTGTATCAGAGGATAGAAAGGGAGAGACGGAGACGCTGACCCCGCTGGCAGCCTTGGCCATGGTAAGGACCTCCACAGCCCAAACCCTGTCTAGTGGATGAACAGAAGCTTCATTCCTGTAGAGGAATGCACTAGAAGGCCCACCCTGATCGTATAGACTACCATCCCCGTGAAAAACAAGGAAACAGGCCCTGGAGGGCTAAAGGGTGTTGATGGCAGAGCCGATATTCCAACGTGGGTTAACACATGCCTTCAGAGTTGTGGTGCTTGGGACTTCCCTGGTGGTCCAGGGGCTATGACTCTGCACTTTCAATGCAGAGGTCCCGGTTCAGTCCCTAGTTGGGAACTATATCCCACATGCCACTGCTAAAGATCCCCCATGGCCAAATAAATAATAAATCATTTTAAAAGAGTTGTGGCACTCAGTGACACGACTGTCCTCACTTCAGAAGTTGTAGACCTTTCCTTCAAAGCCCTATTTTCCCTTTCCAAATCTGCTGCTTTTCTGACATCCTACACAGCTTCTTTCAGTCCCGTTAATGGCTATTTTTAGCTTTACTGATAAAAATTATTTATATGCCAAAGAAGAAATCATCTCGAAGTTGCAATTTTATTGTACCCTAATTTTAAAAAATG EMBV3_41653 TGGCTCAACGACCCCCACAACGTGGAGAAGCTGAGAGACATGAAGAAGCTGGAGAAGAAA Gene GeneID:524491|CUX2:XM_002694498:376_cdna UTR3_Alt 2 NULL GeneID:524491 17 GENE CUX2 NULL cut-like homeobox 2 EMBV3_31444 GAGGTGAAAGATGAAGAAATAGGCTGTATGCTGAACTTGCTGAACGCCTCCCCAAGCCAC Gene BVT0102_110102 + 0 NULL GK000030.2:110672970-110714228 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247964 TCONS_00247960 TCONS_00247961 TCONS_00247962 TCONS_00247965 TCONS_00247963 TCONS_00247966 1 XLOC_151467 Coding TCONS_00247961 XLOC_151467 Coding Coding SYTL5 X:110677998-110814665 j TSS185554 5281 1 TCONS_00247961_3 711 0.181026320772581 17 0.96148273894019 8.4542466415867e-05 7.93274793555951e-05 0.000314726667120509 0.000280410562994937 0.000700781045307841 0.000183838187761779 1.96108944850478e-05 2.6581069379333e-05 0.000449597755439651 1.08124698085614e-05 2.13240531749347e-06 1.42830161775011e-146 6.72215367663248e-08 4.26072878689452e-07 0.000145826878557687 0 0 0 0.000364759252447854 3.87022860157388e-05 6.76397972746714e-05 1.88884673264731e-08 9.43270204877731e-06 7.73823498162574e-06 0.000708347821292584 0.000580788690390593 0.000120318228067501 4.09297280414044e-80 1.54134318591175e-06 1.06230456568192e-08 XM_616807.6 SYTL5 PREDICTED: Bos taurus synaptotagmin-like 5 (SYTL5), partial mRNA. 0.0 3752 100.00 0.393675440257527 NM_138780.2 SYTL5 Homo sapiens synaptotagmin-like 5 (SYTL5), transcript variant 1, 0.0 2617 87.85 0.394243514485893 TCONS_00247961_3 sp|Q8TDW5|SYTL5_HUMAN SYTL5_HUMAN Synaptotagmin-like protein 5; 0.0 1200 85.28 0.973277074542897 2 coding 0 0 0 0 -0.0123252788730891 0.927078460913789 0.0118435161921574 0.839072526116951 GAGAGTGCATTTAAATTAGCTGTTTGGAATCCTTCAGATAAGCTAAATATTTGGTTCAAATGGATTTGAAGCGATTTCAAGAATTACCCATTCACCCAGGAAGTAAGGGCAACCAGAAGCTGAAGAATGAACTCTTGGAAGCAAAACGCAGAAGTGGGAAGACTCAACAGGAGACCACCAGGGTCTGTGCCCACTGTCAGAGAAACCTGGGCTTGATATTCGATCGGGGAGACCCGTGCCAGGCCTGCTCCCTCAGAGTGTGCAGCCAGTGCCGGGTCTCAGGCCTTGATGGCAGCTGGCGGTGCACCATCTGTGCGAGAGTCGCGCAGCTAAGGATTGTAACCGGTGAGTGGTTTTTTGAAGAGAAGGCAAAGCGTTTCAAGCACGTCAATGTTCTGGGCACTGATGTTGTCCGACAGTCCATCTTAAGAAGAAGTCCAGGAGATGGAGAAATACAAAGCCAAGAACAAACCCACCAGAACACAGAAAAGTCAGATGCTTTGCCTTCTTCTGGGCAGAAGGCCAGCCACGATGGACCCAGGAGAAAGGGATTTCTTCTTAGCAAGTTCAGATCAGCAACCAAAGGAGAAATCATCACTCCAAAAACTGAAAGTGGGCGGAGCTACAGCTTGGACTTAGACAGCCACAATTTTTGGAGTTTAAAGTCAGCCCTTGGTTCTGACAGGGGAAGCACTGGCTCATCAGATTTCAACGAGCCAGAAGCTGGTCCTGGAACTCCGAAGAGTGTCCGGAGCAATGGTATGACCCCAGGCACTCCGAGGTCACCGGCCCCCAGCACCCGCAGCGTGACCTCAGTCAGCAGTCGAGAACGTGGTTTTGAAAATTCCACCGATTTGGCTGCCATTGAAAGCACCTCTGAGGACCTCACAAAGACTCATCGCCGAAAACCTTCCAGCACACCATCCATAGCAGTGTCCCGGGCCTCCCTCTCCTCAGACCGGAGTCGATCTGAGTTAGATTTGAGCGGGTCATTTACAGAAGACTTAGAGGATACTATAAGCATAAGGAGCAAATCTGTCCCTGGGGCTTTGGACAAAGACTTGGATTCCTTAGAAGAGATGGAAGATGGCATTGATGACTTAGTGTCCTCCCGGTTTTCTTCAAATACTCACAGTCTAGCGAGTGGCCTGTCAACAACCAGCCTGAACAGCATGATGAGTGTTTACAGTGAGACAGGAGACTATGGCAACGTGAAGGTCAGCGGGGAAATCCTTTTGCACATCAGCTACAGCTATGAAACTGGCGGGCTCTACATTTTTGTCAAGAACTGCAGAAATCTGGCCATAGGAGATGAAAAGAAACAGAGGACAGATGCTTATGTCAAGTCATATCTTCTTCCTGACAAGTCCAGAAATAACAAGCGCAAGACCAAAATAAGAACAGGCACCAATCCAGAATTCAATGAAACCCTAAAGTACACCATCAGCCATGCCCAGCTGGAAACGAGAACTCTGCAGCTCTCAGTCTGGCATTATGATCGATTTGGACGGAATAGCTTCCTGGGGGAGGTGGAGATTCCTTTTGACTCATGGAACTTTGAAAATCCAAGTGATGAGTGGTTTGTGCTTCAACCCAAGGTGGAATGTGCTGCTGATATTAGCCTTCAGTACAAAGGAGAGCTGACAGTCATGTTACGTTACATACCACCAGAAGAGAAACTGATGCCTCCACTAGGACAATTTCAAGGAAAGAAGACCTTTAAACGAGGAAAAAAGAAGGATCCATCTATCATCTCTGGAGGAATCCTAGAAGTGTTCATCAAAGAGGCAAAGAATTTGACCGCGGTGAAATCAGGAGGCACTTCTGATAGCTTTGTGAAGGGCTACCTGCTCCCTGATGATAGCAAAGCCACCAAGCACAAAACTCTGGTAATAAAAAAGAGTCTGAACCCTCAGTGGAATCATACTTTCGTGTTCAGTGGCCTGCATCCCCAGGATATAAAGCATGTTTGCCTAGAACTTACCATCTGGGACAAGGAGGCCTTTTCCAGCAACATCTTTCTGGGAGGAGTTCGTTTGAATTCTGGAAGCGGTGTGAGCCATGGGAAGAACGTGGATTGGATGGACTCTCAAGGGGAAGAGCAGCGCCTCTGGCAGAAGATGGCAGACAATCCCGGAACTCCTGTAGAGGGCGTACTCATGCTCCGTGCCAGCATGGGAAAGACCAAGCTCTGAAGGAGATCCTTATCATCACTGAAGACAAAATATTACTTCAGTTACCTCTGAAACCATTCTTACCTTTTAACAATAAGGAGATGTCTCAGGATCCCTTTTGAGTTTTCCTGCCCCACAGTTGGAACCAACTACAGTTGACCCTTGACCAACATGGATTTGAACTGTGTGGATCCAAATATATGTGTTTTTTTATTTCAATAGCAAATACTAAAGAACTAAATGGTTTGAGGTAGGTTGAATCCAGGGATGCAGAACCACAGACACAGGGGCCTACTTTCCCACTTTAAAGTTATATATGGATTTTGAACTGTGTGTGTCAGCATCCCTAACCCCTATGTGGTTCAGGGTTCAGCTGTACTCTCTAGGGAATCCTGTCACTTTTTGTGACAACTCATGATAACTCGTGTAACCTTTCTTAGAACCTGAGACAGGAAGAGCTGGGCCCAGCTCTCACCATAGAGTTAGTTCTGGCCATGGTAGGGCCCTGGCTCTTCCTGCCTTGGAGTCTAGAATGGGATACTTGGAAATTACTGTGTGAGTCACTTCTGGCACCAAAGCATTGTACCGTAAAATGGGAACATCAAAGCTGTCAGATTCATCCATGCTTATTTCTGTAATCATTCAGTTATAAGCCTGAGATGTCTTACCAATCCTCTCACTGGTCTTCTTTTGTCCTGTAATTCTCATACTGCTCTGAGTGGTCCCCAGCTGAACTCTCTCCCAGACTTTCTTTGATGCCTTCCGGACCACTACCATGTGTGGGCACATGCACGCACGCATGCACACACACACACACACATACACACACACACACACACACACACACACACTTCATAGTAAATTAGGCTTCCTATATCTTTGGTGTCTTTTCAGGATAATCTTGAGTAAATCCTGACTTTATCCTGCATCACTTTTCTTAAAGGATATTGTTCTTTGTTCCACACTTCAGTATTTGTTGCTTGAGAGGCACCGTCATTATCATTCCAGTTCTCCACTGCCCTTTCTAATTCTTCATTTTTAACCTAACCTAAGCAAAAGACTTTCTCTGAGATTCTTGCCTCCTAACACATGACTTCCATCACCTCCCCTTACAACCATCCATCTACATTACATTTGGTTCTCTCCTCCACACTTAGATAAGCCTTTGGAATTTCAATCTCATTTATCTTCTCTGTCTTCAATCTTGCCAAGAGGACTTATCATATGGACAACCCATCCACCTCTCTAACATCACAATTCCAAGGATGTTGTCCTCCATTCTCTGTCATCACCTATTTTCTAAATGCCGCTTATCTTTTACTGACTATTCAATCTTCAACCACCTGGGGCTCACCAGCCCTTCCCTATATGTGTTCAATATCTTAGTGCTGTTGCTGCCCTTTCTTTTCAGACTGATCCAGGTCGCTGTTGGTCATCATATTTTCTCAGTCCTACATATACCTCCCTCACCCTTGTCCTTTCACCACACCTTTAGCACAACCCTCCACCCCAGATCAGTTCTCTAACATGCCTTCTCTCGTCCTCTACCTGGATGATGAAGCATTGCTGAAAAATAAATGCTCATTTGTGCTGATTGGCTTCAGTATGGCTTATAAGATATTTTTCCAAGAGGTACTTAAATATCTCTGTTAACTATTGAATTTCAAGGAAGCAAAGTCCAACAAATCCAGTGTTTGAAGACTACAATTTTTATTTTGCTATCAGTATCACTCAAGATTGAGTTTCAGAAAATAGAATCTATTACAGCTAAACAGAAAGGATTCCCTCATCATCTAGAGGTGAAAGATGAAGAAATAGGCTGTATGCTGAACTTGCTGAACACCTCCCCAAGCCACTTGGGAATGCCAAAGGAGCTGCCAAGAAACTAGAAAATCAGGAATTTGCCTACCAGATTGAGAAGGTACCAGTAGACTTGCTTGTTCTAGGACCATTCCATTCTTGCCACCATCAAGAAGTCATGGTCCCAATTAAGAAGCTGCCATCAGTTATTGGCAAAAAACCACATTGCCTCAGCCACAGTCTAGAATAATATGCTTGTTCTGCATTTTTCTCTTTCCACACATTGATTTAGTTTCAAAACCAAGTCACACTTTGAGTGCATGTGACTGATGGAATCTGTTTTGTTTTTCAATTTTTGTTGAAGTATAGTTGATTTACAATGTGTTAATTTCTGCTGTACAGCAAAGTAATTCAGATATATATATTTTTTTTCAAGTTCTTTTCCATTATGGTTTCTATTGAATATAGTTCCCTGCGTTATACAGTAGGACCTTGTTACTTATCCATCCTGTATAAAATAGCTTACATCTGCTAACCCCATACTCCCACTTGATCTCTCGCCCCCACCTCCCTTGCCTGATAGAATTTTCATCACTTCTCAAACTACAGCTGCAATGGGACCTGGGGAATATAATTTGTCTTTCTTCATCTGCTTGCTAAAAAGGGTTGAATACATATTAAGCAGACCTATCTACATTATTGACCACACTACCCCTATCCTAAAGATCACTGAATGATTCTCTAATATAAAAGTGTTTAGATGCTGTAGAAGCCAGCTTTCAAATTGTCTCTCCCCACCATGACCTTTACCTCTTGGTATCCATACATTTATATATCCCCTTCCCTCACTGAATAGGGCTGACGTATGTGAGATCTAGGATTCCTTGGAAGTAACTGCATGTCTTCTGAGGCTAGGTCATAAAAGATATTGTCACTTCTGCTTTGTTCTCTTTTGGATCACTTCCACTGGAAGAAGACACCACCATGTTATGAGAACACTTATGCCACTCGAGAGGCTCATGTGGGGAATAATAGAGGCCTCTTCCAATCAATAACCAGTACCAACTTGCCAGTCATGTGAGTGAGCCTCCATGGAAGTGGATCCTCCAGCCCACCAAGCCTTCAGGTGACTGCAGCCTCATGAGAGAGTACAAGCCAGAATTGTTCAGCTAAGCTGCTCTCAAATTCATGACCCACAGACAATGTGAGAGAGAATAAACATTTCTTGTGACGTCACTAAGCTTTGGGGTAATTTTCAATGCATGAATAGATGCATGATATGGTTACCAGCGTGTCAGTCATTGATC EMBV3_06292 TTTGGACGCACAGCATGAATCCGGACAGAGCAGTTCAAGAGGCAGTTCTCATTGTGACAG Gene GeneID:784492|BNIP3L:XM_002698781:129_cdna Constitutive 0 NULL GeneID:784492 28 GENE BNIP3L NULL BCL2/adenovirus E1B 19kDa interacting protein 3-like EMBV3_32357 CACCGATCTCGCACGCCTTTTCTGGTGACTTCCATTTTGGTAAGGTAAGATTGGAGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40315 CACCTTTTGGATAAGGGAGATTTTGGCACTCAGAAAGAAGCTGCGTGGGCCATAAGTAAC Gene GeneID:535090|KPNA4:NM_001159316:149_cdna Constitutive 0 NULL GeneID:535090 1 GENE KPNA4 NULL karyopherin alpha 4 (importin alpha 3) EMBV3_21478 TGGAAAGGTCTGAAGAAGAGGTCTGAGGATAGAGCCCTCTGAATGGCAGAGCAGGAAGAT Gene BVT0102_306167 + 0 NULL GK000019.2:8052592-8070019 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30979 GGGCTCGCTGGCCCGGGGCCACGTTGCTGACTTCCTGGTGGCTGACTTCAGGCAGCGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21458 CTGGGATTGGCCCCGTTTCTGTGACCTCTTCCTCATGAAGGCACTTTAAAACTTCGCGTT Gene GeneID:505595|MCF2L:XM_002691997:105_cdna Constitutive 0 NULL GeneID:505595 12 GENE MCF2L NULL MCF.2 cell line derived transforming sequence-like EMBV3_00654 GTGTGGGCCGCCCAACCCGGCCGAACTGTACAGCTCCGCTTGGCGCGAGAGGTGATTGCA Variant GeneID:508561|FAM83D:NM_001083393:958_cdna 110^482 1 EMBV3_34186 GeneID:508561 13 GENE FAM83D MGC140374 Protein FAM83D EMBV3_06019 TGCAAGGCGGAATCTTAATCACTGGACCACCAGGGAAGCCCCACGTCCTCTGTTTTTGAT Gene BVT0102_026331 + 0 NULL GK000005.2:98576591-98721536 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24069 CTGGAGATCCTGAAGCAGCCCACAACCTCTCGGCCATCACATCTCACCAGAAATGGAGTT Gene GeneID:525042|GPD1:NM_001035354:83_cdna Constitutive 3 NULL GeneID:525042 5 GENE GPD1 NULL glycerol-3-phosphate dehydrogenase 1 (soluble) EMBV3_10809 GATGATACCCAGGAGGCCTTTGAAGTTCCAGTGTGGCTGGATCTCTTGAAACCTATTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31204 AGGATATTACCAGGACTCTTGTGTTCACCTGGGAGTTTCTCTCACCTATCCCTCTGCCCT Gene GeneID:785213|MGAT5B:NM_001102337:47_cdna Constitutive 0 NULL GeneID:785213 19 GENE MGAT5B MGC151539 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B EMBV3_29380 GCTGAGTGAGCAGGCACCCCTCCTCCTATTTAAGGATAGATGGCACCCTAGAACTGAGAA Gene GeneID:512915|LOC512915:XM_002707739:517_cdna Constitutive 0 NULL GeneID:512915 16 GENE LOC512915 NULL similar to zinc finger and BTB domain containing 17 EMBV3_34702 ACGGGGAGGCCGGGGAAGGATCAGAAGGGCAGAAAACTATGGAGCCAGAGCAGAAGTGGT Gene GeneID:514807|HABP4:NM_001081523:8_cdna UTR3_Alt 2 NULL GeneID:514807 8 GENE HABP4 MGC143277 hyaluronan binding protein 4 EMBV3_39876 ATGTTCGGCTGCTTGGTGGCGGGCAGGCTGGAGAAGGAAGCCAACACCCGTTTGGAACCA Variant GeneID:504867|C29H11orf73:NM_001034226:11_cdna 233^470 2 EMBV3_29468 GeneID:504867 29 GENE C29H11orf73 C11orf73 MGC128621 chromosome 11 open reading frame 73 ortholog EMBV3_42837 GTCCAGAACTGCGGAAGCTCTCACCTGTGCCATCTCTGGTTGCTCCATCACCAATGGTTA Gene GeneID:444876|LOC444876:XM_002696802:546_cdna Constitutive 0 NULL GeneID:444876 21 GENE LOC444876 NULL IgM EMBV3_18134 CAACCACATGAAGGACCAGAACAATTACAATGAGGAGAAGGACTGCTGGAACCGGGTTGC Gene GeneID:281687|CHRND:NM_174271:31_cdna Constitutive 2 NULL GeneID:281687 2 GENE CHRND NULL cholinergic receptor, nicotinic, delta EMBV3_37460 CTCTGGGGAACAGAGTTGGCTTCTTGCTCCGACCCTATAACTTCTTTGATGAGGACCCCT Gene GeneID:100336082|LOC100336082:XM_002695998:389_cdna Constitutive 0 NULL GeneID:100336082 19 GENE LOC100336082 NULL amine oxidase, copper containing 3-like EMBV3_37254 CTCCCTCTTCCATCCTCCCCAAGAAAAAGGAACCTCACGGCAAGAAAAAGAAAGCAGCAG Gene GeneID:507993|HABP2:NM_001014868:27_cdna Constitutive 0 NULL GeneID:507993 26 GENE HABP2 MGC128149 hyaluronan binding protein 2 EMBV3_00028 CACATCAGCGTCAACTCCCTGGATGACAATTCTGTGGATCTGGAAAACAGTGCGCAGGAA Gene GeneID:511921|CDHR2:XM_002689004:38_cdna Constitutive 0 NULL GeneID:511921 7 GENE CDHR2 PCDH24 cadherin-related family member 2 EMBV3_42645 GGGTCCCCCAGAGGAGTTAGGTCAATTCAGGGCATATAGCAAGCACACAGTAAACCAGTG Gene BVV0102_374658 + 0 NULL GK000003.2:84540189-84657677 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34560 CACCCACATCTGTGCTCCCCAAGATTTCAGGGAAGAGTAATGAAGCCAGAGGGGTTCTCA Gene GeneID:784997|B3GNT3:NM_001098473:134_cdna Constitutive 0 NULL GeneID:784997 7 GENE B3GNT3 NULL UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 EMBV3_13404 CCTAGTAAAAGGGCAGGTGTATTTGTTTGCCGTCTGAGCCGCACTGGTGTTTGGAGAAAG Gene BVV0102_196915 + 0 NULL GK000005.2:116422436-116447251 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193630 1 XLOC_117534 NonCoding TCONS_00193630 XLOC_117534 NonCoding NonCoding - 5:116441256-116442748 - TSS144673 1408 2 TCONS_00193630_1 63 2 0.0570087189805499 2.89892821581759e-05 0.000285466763541671 0.000663817074294298 4.7182611389139e-05 0.0002910405777654 0 0.000285786972869771 4.20079581122182e-06 0.000257774628482812 0 1.62584072334711e-06 7.61863988822103e-06 1.0189196629701e-05 0.000136976821343443 7.66590993606744e-05 0 0 0 1.01859787024365e-05 0.00108280050262282 6.46817241475145e-06 0 1.95469762678301e-05 0 0.000797169051036669 0.000515399426398798 8.32265704182988e-05 0 1.03436017803344e-05 0.000179342014371456 XM_005207475.1 FAM118A PREDICTED: Bos taurus family with sequence similarity 118, member A (FAM118A), transcript variant X1, mRNA. 4e-96 356 100.00 0.139204545454545 0 noncoding GAGTTGTACAGCGTGTCATATCCGATGGACAGACTGTTGGCGAACACTTCAGCTGTTGGCAGCTAGTGTTTTCCTAGTAAAAGGGCAGGTGTATTTGTTTGCCGTCTGAGCCGCACTGATGTTTGGAGAAAGCTGGGACGACTGCATTTATCCTGGTGGTTGGCCTCTTGAAAGGATTTACCGTCAGCCTTGGCCAGCCCTAACAGGTGCAGAAGGTGTCACTGATCAGTGCTGCTCTTTGAACCACACGGTGACCTGCACATTTGTCGTTAGCGGTGGGTTTTGTTGCTTTCTTGGTTTGAGCAGATGAGCCCAGGCTACTCTGGAGTCGCTTTCAAGAAGCAAACGGACACGTTTCAATCACTACAGAATAAGAATTTTTTTTCCGCTGCAGTTTGTGTCGACTGAATAAAAAGCGTTTGCTTAAGTAGCGTGTTTTCAAATTGAGGTTTTGTATTTCCTGAAACTTGGGGGGAAAACAGCTCATCCTGGAGACCTCTCACTAGAAATGGCTAGATCAAGCGGTCAAGTTTCACCAGAGTCCAGGTTAGATGAGTATGTAGTTGTGGGGAAGTAGTGTTAAAGTGAAAGCCTGCTAATGCTGAGGGAGAGAAGCTGGCTGCCTGTGTGGCGACAGTGGTAGACAAACGTCTTCAGGTTAAGTGCCTTTCGGGTCCTTGGCTCGCTTAAAATCTTCAGGAGAAGCCAGTCAGTGATGGGGATGATGGCATTCCCTTTCGACAGATTTGGAAACAGGTTCAGAGAGTGGTGGTGCTTCTGGTCTCCAGACCCTGTTTTCTCCACTGTGGCCCTGGGCGTTGTGGTTTCAGGGCAGGCCTCTCCTTTGCGGTTCTGGAAGCTTGGTTTCTGTCCTTTTGCAGCTCATTTTCAGTTCAGGTGAACCTAATTAGGCCAATCAAACTCGCCAGGAATAACCTGTCAGGCAGATTCCAGATAATCCATTAGTACTTGAAAACTTCCTCTTGTTGCCCAGTGACTTCTGCTTCTGTGGCCCCCTCCCAGGTCAGCTGGGGGAACCAGATTGCTGCGAAAAAGGCAGTCTGTGGGAGTCACATTAGACTGAAGGGCCTGGGGATGCTAACAGCCAGGTGAGGCAGGTGGTCTGCCAGCTGCTGACAGGAAGGGCTTGCTTGGTGGCTGGAGGCCTGCAGACCCGCCTGGGTGTAGTCACCGGGTTTGGCCTCCTGTAAGGACATTCCAGTCTTTAGGAACCACACAGGGCCTCAGCTGTCATTTCCAGGTCTCCTGTCCCCTGAGGACAGCAGGCGTCGAAGTCACTCCTCAGCGTGGGTTCCTTGGATAACAGGAGCAAGCGGGGATGTTGAGCATAAAAGCTTGCTGCGCTGCCTGTTCAGGCCTTCATCTGAATCAAGTTGTTAGTAGTCAA TCONS_00193631 TCONS_00193632 TCONS_00193633 TCONS_00193634 TCONS_00193635 s 5' 4504 TCONS_00193631 TCONS_00193632 TCONS_00193633 TCONS_00193634 TCONS_00193635 s 5' 5995 EMBV3_17004 GCTCTCCAAGTCCCCACTTTTCAGGATGGGACAGTATCTGATGAACTTCTACCCATGGAG Gene GeneID:528156|NR2E1:XM_002690120:141_cdna Constitutive 0 NULL GeneID:528156 9 GENE NR2E1 NULL nuclear receptor subfamily 2, group E, member 1 EMBV3_00041 GTCAGGGTGTGACATTTTTGGGTTGTCCCACTCCATCTGAGTTCCCTAAAAGAGACCTGG Gene GeneID:510440|IVD:NM_001034382:136_cdna UTR3_Alt 2 NULL GeneID:510440 10 GENE IVD MGC127338 isovaleryl Coenzyme A dehydrogenase EMBV3_35556 CTGTCCAAACAGGTGGGGCTATCTCTGAAGCCCTGAGGTAATACTGTCCAAGTCATCTGT Gene BVV0102_028041 + 0 NULL GK000022.2:22230268-22575228 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24894 AGGTAGATGAGAAGAGAAAGAAGCGAGACATCCCCGACTACCTGTGCGGCAAGATCAGCT Gene GeneID:504565|STUB1:NM_001075166:60_cdna Constitutive 0 NULL GeneID:504565 25 GENE STUB1 NULL STIP1 homology and U-box containing protein 1 EMBV3_01572 GTGGCATATTGATGGCTCCTCAGTGTGGAAGTCTTATCAGTATTGTGTTAAGTATAGACC Gene GeneID:782885|ZNF605:XM_002694442:16_cdna Constitutive 2 NULL GeneID:782885 17 GENE ZNF605 NULL zinc finger protein 605 EMBV3_16376 GCCCCACAATGGGCCTGTGAAAGGGGACACATGGATGGGCAAAGGATAGTTTTATTTAAC Gene GeneID:768238|LOC768238:NM_001078113:6_cdna UTR3_Alt 1 NULL GeneID:768238 17 GENE LOC768238 MGC152045 hypothetical protein LOC768238 EMBV3_20839 CTTGTTCATGAGAGGCCGCTAGGCAGGCAAGAGCTGCCACCTTGTATGGTTTGTTAAAAG Gene GeneID:534492|MAPK14:NM_001102174:56_cdna Constitutive 2 NULL GeneID:534492 23 GENE MAPK14 MGC142910 mitogen-activated protein kinase 14 EMBV3_14513 TCTGGCCCCCGCGAAGGAGCACGGGGCTTGTGTATTGCATACTTTCTAAGGCGGCCGGAG Variant GeneID:506961|ADC:NM_001038510:70_cdna 391^481 2 EMBV3_19407 GeneID:506961 2 GENE ADC MGC134604 arginine decarboxylase EMBV3_33001 GGCGCAGAGAACAGTTTTTGAGACAGTATCCTTGAGTTCAGACTCTCTCTTCCAGAGGAC Gene BVV0102_035515 + 0 NULL GK000013.2:43366323-43407523 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045247 TCONS_00045248 1 XLOC_026389 Coding TCONS_00045248 XLOC_026389 Coding Coding FAM208B 13:43332646-43399021 j TSS33067 9163 1 TCONS_00045248_10 2382 22 0.862280411004309 0.000263212634136965 1.15449538126793e-20 0.000612960338724028 0.000114924028310302 7.56025938093315e-11 1.29349506531002e-41 5.63112536046817e-05 1.69969506657719e-13 1.92877490842295e-32 2.26605453147336e-35 8.73364723342089e-06 8.87956051729708e-14 3.33017834341175e-26 4.06401566174333e-05 8.6662538087001e-35 2.72011081733465e-13 1.57353806012307e-16 3.66324900549279e-115 0.000115788205919123 5.0063651293513e-05 5.87701644713804e-35 5.28290113925727e-22 0.000363170436850992 4.89208232818026e-27 0.000215963559978364 4.26686464965177e-18 2.23353600516311e-05 1.38487801312732e-80 1.51307522560319e-24 2.1877754446172e-08 XM_001253614.5 FAM208B PREDICTED: Bos taurus family with sequence similarity 208, member B (FAM208B), transcript variant X1, mRNA. 0.0 1.488e+04 99.76 0.902979373567609 XM_005252475.1 FAM208B PREDICTED: Homo sapiens family with sequence similarity 208, member B (FAM208B), transcript variant X2, mRNA. 0.0 2507 81.10 0.286914765906363 TCONS_00045248_10 sp|Q5VWN6|F208B_HUMAN F208B_HUMAN Protein FAM208B; 0.0 2589 59.09 0.997061293031066 0 coding 0 0 0 0 0.033405906034125 0.886974332563842 0.014668241018904 0.809378892209041 CCGGGCGGCGCTCCTGACAGGGGCGGAGAAGCGGGACGGGCTGCGACGTGGAGGGTCCCGCGCGCAGCTGACGAGCCTTTGCTGACGCGGGCCGCGTGGAAACCGGGAGGAGGGGAGTCCCAGCCAGGGGCGGCGGACGGCTCCCCAGCCCGGGAGGCGGCCTGAGCCCCGCTCGGTCTCAGGGTCCGACGAGATCTGCCACTCGTGGCCGGGAGAGGAGGCAGCGCGCGTGGAGGCGCGGACAGCATCTCAGCATGAGGAGGAAACTGAACTCTGAGGTCAGATCTGCCAGGGCGGCGGCGGCGCAGAGAACAGTTTTTGAGACAGTATCCTTGAGTTCAGACTCTCTCTTCCAGAGGACAGTTTCAATTCTCCATACTTCTTACTTGGACTCTGCATCTGAGCATGGTTTTCAGTACAGTCAAGTGACTTTGGTGAAAAATGACATTTTCTTAAATGAGTACAAAGCTTTTTACCAAGAAAAAAAAGCTAGTAACTATACTCACGAAGAACTTCAAGAAACTTACGGGTTTCTTCTGTTTGAAACTGAAAATCAGGCGAAGTTGGTATGTCAGCATGGACTCTGTGTGGGCAGCAGTGCTATCACCACTCTGGGAGACCCAGCAAAAGGTGTGTACATTTCCAAATACTCAGACTATCTTCACGCAAGACCTTGGTATCATGGGAAGTCTGGTTATGTTGTAATTTTTAATCTAATTAAGGGAAAAGTCAAGTTTGTGTCTGAGAATTATACAGCTAACTATACTAGCCCATCTTCTGGCTATGATTGCCATGTGGCTGCAAATACTAACAAGATTTCTCACAAGACAAGTCATTTTCGCACCTTTGAACTGAGTCAGTATTACCTCTATGAACTTTCAGGCAGCACTGTTACTGAGCGACCCAGACAGATCTGTCCTTACCTGATTGTAGCTTTTCAGTACAGGGAACCTAAAAAGATGGCAGCACCAGCCCATGATCATAAAAGCATTTCTCATCTCTCCATGGAAAGGGAAATTAATTATACAAGGCTGTCTGCTGTGTGATATAACTCTTTGGTCTTCCTATGGTACAGCAGTTCCAAAACAACTACCACATGAACTAGATTTTAAGTATGTAATGAAAGTGTCATCTTTGAAAGAGAGACTACCAGAAGCTGCTTTTAAAAAACAGAATTACATGGAGCACAAAGTCTGTTGCCAAGACATGTGCTTCAATATGTATGAGGTGGAGCTCTCAAACAAACGGGGGGAGAAAGTAGATAAACTAATAGAATCCATTAAAAGGGAACAGTTGGCAATCATCAAATGCTTAGAAGATCGAGAATTTTTCATTTTACTTACGTCATCAGCCTTAATGTACGAAACAGGTTTTAGAGAGGAGCAGACAGGTCTACACGGGTTGCATTTATTCCACTCACCTCCACCAGCAGCAGGTCTTACAGACTTGAAAGTTGAAGACAACATCTCATTGAAGGTGGTGCCCGTTTTGCCTGCCCTCAATTGTGCCCTGCTAGAAGCAAAGAAATCATTTTCTGAAAAAGGAATCTCTCTAAACACATTAGTAAAGCATAATTTCCAAGACTTGTCCAAGGTGAACAAAAGCCCTCCACTGACTGCTGCTTCCCAGGACGGATTTAAAGAAACTGGCTTCTCTGGCCAAGTGTCCAGTGGTTTTGACTTGACTCCTCCAGCTGAAAAGTGCCCTTTACAGTCTTTAACTCAGCTGAAGTCTTACTTTTCAAATGCGAGCGGGTACATTTTGGGAGTGTCTACTGTGTTAGGTCTATTGGCAGAGCGTCCTCAGTCTCCTTCTATTTCAGATGGGATATGCGATGCAGGCTTTTCTTTAGTGATGACTCCAGATCCTGAATTTCACAACTCAGAGGCAGAAGGAAGAAAAGATACAGAAACTGGAAATAACTCTGAAGATGTGTTTCAAGCAAGACAGGGAGCTCTGGTCCCACTGAGCCTAGCACCAAATCTGAGAGTGCAGCCCAAGAGAAAGGCAAGCAAGCTGCCCATGGTACAGAGTAAAAGGGTGAGCTTGTACCGACCCTTCCCCAAAAGGACTCCTGCTAGAGAAAACAAGGGTCCCGCCTCTTCCACGACTCTCAAGCTAGTCAAAGGACAGTTTCCTCAGAGGAGAAAAAGAGGTGCTGAGGTGCTGACTACACAGTTTGTACAGATACCCAAACTGGGTAGGAAAGCCCAAGAAGCTCCTAGTTCTAAAGATGTTCCAGTGGCAACGAATGCTAAAAGGGCAAGGAGACGAGCGACCTCTCCAGACACACCTGTTCCAACGGCTAAGCCACCCATGAAGAAACCTCCACAGAAACAGAGGGTAAATATAGTAAAAGGCAATCAGAATCCAAGACTCAGAAAACAGCCACAACCTGCCAAAGGAGAAACTGCTTTACAGCTTCAATCAGAAATTTCCAGTGGTCAAGATGTTATTAGCATAAATACAGCCCAACCAGAACATGTCACGGTGGCCCCAAAAGCCCCGACTGAAACCTCTGTTGTCGGCTGTGACTCCCAGGCCCTTAACATGCTGGCCGACCTGGCTCTGAGTGCTGCTACCTCTAGCACGACATCCCCCGAGCCCAGAAACCTCTCCGGCTCCCTGGAGCCGCCGCAAAACAGTGTTCTGCTTTCTAAAGAACAGCCTTTGCGTGGGACATCAGACCACGAATACCACAGAGGAGTTAAAAGTCAGAAAGGTGGGCCGTCACCCAAGCCGTCCTCTGACCAGAGTAGGCTGTCATCAGACCCCACAGTCAGCCCAGAGGAAGAGAGCGTGGGTCCTGGCAGTTGGGCGCCTGCAGAAGCCCAGCCAGCACTTCCCAAGGAGATCCACGAGAGTTCCGATGCAAGCCAGAGCTCTTTCGTGGCTGCGGAGCATTCCTACGCCCTGCTCCTCGTAGAACATTCAAAGAGGGGGAGCCCAGCCCTGGCCTTTGCCAAGACCAGCACCAAAGGCTCTGACATGGGGACCCCTGTGGGGAAGGTGATACCCTTCCTGCGCACAAAGATGAAGTCCCCGCTACAGAAGCTCTCCATGGCCCTGGCCTTCAGGCACAGGGGCAGGTTGCTGCCCACTGGCACGCAGGACTTCCGCTGCTCCTCACACACCGTATTCTGCTGTGACGGCTCCTTTAAGGTCACGTTCACATGTGAAGCAGATTACTCTTTCAGCTTAGACAGCAAGTACACCAACAACCCTCTGGAGAAGACTGTGGTCAGAGCACTGCATGGGCCCTGGAATACTGATTTACCAGATAACGTGGAAGAGGTGAAGCTTCTGCTGCATATGTGGGTGGCTCTGTTTTATAGCAGACAGAACAAAGTTGTGCGGTCATCCCGGAAAGTCGTTGAACACAGCAACCCAGCAAAATACGTGTCCATAAATAGCACACTAGAGTCATTTGAGTTTGGTGAAATCGAGGAGCCCTCCAGAGTAGAGAGGTTCTCCGTAGACCCTCTGGTGGAGGCCAGTGAGGCTCCCAGAGGCCATGCAGCTGAGGTGTCCTGCCCTGACGCTGACCCCCTGCGTCCTTTCACAAAGCCGTCTCCTGTGAGAGGCCTGGAGCTCTGGGTGCAGAATGAACAGAAAGAAATGTTTGCAACAGTGGGTCACCAGGAAAGCCCAGAAAGCCAGAATTTCATCTGTTCTTATAATAATGAGATAATTAGGGGGAAAGCTGAACAAGAGTCATCAGGTAAACTGGAGACTTCCAATCTTGTGCTTCCTTGCATTGGAAACACTCAAGCTAATGGACCTTCTATTCCTGGTGAAGATGAAACCTTTGAGCCTCTTGATAACACACAAGTGACCTCTTATAATGATACTGCCCCACAAACCACATTTGCCAAGACTTATGATGAGATCAACAGTCCATCAATGATTTGTCAGAAGTCTGTGTATAGCACCCTTGAGAGCAAAGTTGATATTTTTCATGCACAAAGGGAAACAGAAGCAGATGCTCTGCAGGGCCTTACCCAGTGTAGCAGCCCCATAAACAAAGAATGTCAGCCATTGTTGGAGGGGAAGGGTGATATGGGGTATGTGATGATTAATCTGGAACCAGTTACACTCACTTTGGAAAAAAGTGCCTACATGCCAGTACAGACAGAAGCTGTCAACAGAGCTGACAAACCAACAGCCTTTAACGTGGAGTTGACTAAACAGGTGTCACCTGCTGCAAGCCTTAGACATCCTGTGTCCACATTTGAAAAGTCACAGATGCAGGGCCTTGGGGAAAACCCCTCACTGGCGGTGTCAGGACCAAAGGGCACTCAGTACCTCCATGCCTCCTCAGTGCGTAGAGAGACACTTGCTGAAGAAACATGTTCCTTACAGAAGGGACAGGCTGTGGCAGGCTCACCTTCACCATCTGATAATCCCATGGTAATGGAAGCATTACCATTGGCTAAAAGTCCAAATTACTTGTTACCCAGAGAAGAAATGAAACTCTCTCAAGAATTCCTTCTCCCCACACAGAATCTCTTGAGCATCTCTTCAGAAGAAATAATAGAGCCGTCCCAGGTTGAAGTGGTTCCTTCGTCAGCCTCTGCCCCCTTGGGAAAAAAGGATTCCCTTAACTGCATCACATCACTAAGGAATACTCTGTGTGGCTCTTCAGAACTAAAGAAGGACAAGAGTGGTCTGAACAGTGAAAATATTAGTATTCAATCATTTAATTCCACATTTACCAAAGAAGCAGGCCTGTCTGTGAATGGAGAGGAGGTCAGCCTCAAGGTATCAGAGGAGGATTCCAACCTTGACCTCACTCTCACCCTATCACCACCCACGAGTCCTAGGGAAGAAGCGCCCACTGGTGAAGTGGAGCAACTGCGGGAGGCCCCGCTACCCTGCATAGACCTTCAGGAGATGGCAGAGGAAATACTCGTGCCTGCAGAGGTTCCTTTCATAGAAAACAGAGACGTGAACTCTGCTGCTAACACGTCTGTGAAACCAGCAGAAAACAAAGAGGGAAAAGGTGATCATTTACAGACAGTGGCTTTCATACTTTCTAAAGAAACGTGTACCCTTGAGGTTGCGGAGGAAGTTCACCTTGCCTCTGACTTCCCATTTGGTTCCTTGATTGAAGAAGTGTCACCAGCTTCCAGCCCTGACCCCCAGGCACCAGTGGAAGAAGCACCACCAGCTCAGGCCACATCTCCATGTGGTCTGAAACAGTGTGACGCGCTTGGTGAGAAAAGCACCAGCCTCTTCAAGGTCGAGTCAGGAGATTTGGCCATAACAGAAAAGGAAAGTTCTCTTGTTACTGCCACCCATCCAGTGGAACAGGATAACTCAGCTCAGGTACAGCAGATGCAGCTTTCTGCTGAAACACCTCTACAATTACAGAACCGCGCAGGAAGAAAAGGTAGATTCTTAATCCTTCCTGGTGACGTCACTCAGGAAACTGGCCAGAGTAAATGTGGGGAGGGCTTCTCCCTCTCAGGAAAGGGGCCGGACTGCGATGGCACGGTAACCCAGCCTGCCTGCACTGCCACCTACGGAGGTTCTCTTGAAAACCTGGTATCGTCAGGATACCCATTGCAGCCCATGGGTGTGGAGACCTGCAGCCCCCACCCACATCATCGTGTCCTGGAGACCAGTGAGCCTTTCAGTCCTGCAGAGATCCCTGAAAACAAGTCTGCTGACATGTTTGTTTCTACAGCCACACCAGGTGCTGTGGTGACCAGCACTCAGAGCCTTCCTGAAGATGTTTTGAGCAGTGATGTGAAAACACACGAATGCTGTTACATCCTGGTTAAGTCCTTGCGCTCTGACCCAGTTGCTGGAGCTGAGGGTGTGCAGACCCACAGGCAACCAGAGTTCCCCAAGCCTGCACTCCCCTCGGGTGGGGCCACCGCAGCCCACAGCACAGGCCCCAGCAACACGGGGACAGGGTTCCCGACACAGGAAGTCCCGGTTGTCAGGATGACCCATCTGCTCGACAGTGAGGATAGTGGAGCCGAGTTACAGGGAAGAGCCGTGGATCCAGGAGGTGCCAGCCCCCAGGTGCTCACCAGCTCCCCACAAGGCAGACAGGAGCCAACCTGTCTGCTGCAGGAAGGGTCGCCATGTGCAGTATGGGATCTGCTCCGTGGTGGACTTCTCCCCACGTACCTGCAGGCTGATGCTCACCCAGGTACTGCAGCCCATGGCGAGAGTGCCAGTCCAGAGCCCAATGTGTCCTTTGCTCCCCGATCTGGTGCACCTCCCATTGGTGGGGTCTCCGAAGAGCAGCTGCAACGTGTGAGTGTGGGCGAGGCAGGCACAGGCGGAGGCATGGGTGTGGGTGTGCTCTCTGACATCTACTATGAACCCCTGTCTGGAGACTCAGATCAGGACTCTGTGGGTGAGTATGGACACCCCAGATACAACACAGAAGAGTCCCGTGCTTCACAATATGGCCACACTGGGAAAAGAGAAGGTGCATCCAAAGACAGTCACGACTCTTTCCTGAGCCTGAACACCAGTGATCACCACGACTGGGGCTACGCGAGCCAGGCTCCAGGGCTGGAGACCAGCATTCCTCCCAGAAGTTGGCTGGGTGGACTGAAGAAGGAAGCTACGTGTGTGCCCTGTTACGTCCAAATCCGAGATGTCTGCGGGGTCCCCAGGAGCTACGCCAACTTCACCGTGACCAGAGAGCTCAGAGACACCCCAAGAACCCTGCACGGCTTGAGGCGGCGCCCCAGGGGCATGGCCCCGTGTGGCTTGCTCAGCTCCTGGATGGACACCTGGCAGAGAACCGACGACCTCACCCAGAACACTTTAGACTTGGAGCACCTGCGTTTTGCGCACAAACTGAAACAAATTGTGAAGATGGGAGCCGCTCAGCATTCTGCCCTCTTCCCCAGTGCCTTTCCAAAGGAGCCCCCATCCCAGGTCACCACCGGGGCTTTTCCTGGGACCCCAATGCCCGCATGCCTGGGGCTGCCTCCCGCCTCCCGAAGCAGGAGTCCTCTTGTGGTGACAGTCGTGCATCAGATGCCCAACCATGTGGACCGCTCCTCCTCCTGGAAGAAGAGGTGTGGCCATGGTAGAAATCACCTCACAAACTCAGACCAGAATCAGACCGCCTCCTTCCACCTCCACAAGCTGAAATACAACAGTACATTGAAAGACTCGCGCAATGACATCGCTGTCATTCTCAGCGAGTATGCCGAGTTCAACAAGGTGATGCTGAGCAGCCGCCAGGTGGTCCAGGACACAGAACCGCCTGTGGCTTTGGGAGCGGCCATGCCCCGCGAGCTCTGTGTCTGCGGCCCACAGCCCACCTCCTATGAGGACCTGGTGGCCGACCTGTGCTCCAGCCTGCGCGTCAAGCTGGAGCGAGTGGTGAGGGAGGCGTGTTCCAGCAACTTCCTCTTCTACCTCATGGAGACTGAAGACAAGTCCTTCTTTGTCAGAACAAAGAATATCCTGAGGAAAGGAGGCCACACAGAAATCGAACCTCAGCATTTCTGTCAAGTATTTCAGAGAGAGAAAGGTGCACTCTTAGTCATCATCAGAAATGAAGATATAGCATCCCACCTGCATCAGATCCCTTCTCTGCTGAAGCTGAAGCACTTTCCCAGGGTCGTCTTTGCCGGAGTCGACAGCCCTGAAGACATCCTCAATAACACCTACCAAGAGCTTTTTCGGACAGGAGGCTTTGTGGTATCAGATGACAAACTACTAGAGACTTTAACATTAGTTCAACTGAAGGAAATTGTCAAAATCCTAGAGAAACTAAATGAAAATGGAAGATGGAAGTGGTTGCTTCACTACAGGGAAAATAAAAAGCTAAAGGAAGATGTAAGAGTGGATTCAATTGCACATAAAAAGAACTTAATATTGAAATCGTATCAGAGTGCAAACATCATTGAGCTGCTTCACTATCACCAGTGTGACTCTCGACTATCAACCAAAGCTGAGCATCTGAAATGTCTGGTGAACCTGCAGGTTCAGCACATCCACGCCAGGTTTGCTGTCTTCCTGACAGAAAAGCCTGTGGTCTCCAGAGAAGTCTTTGAAAATAGTGGCATCCTTGTGACAGATGTAAATGACTTTATTGAAAATATACAGAAAGTAGCAGCTCCGTTTCGGGGTAGCTACTGGTAAGAACACTTCCCAAACACTCCCATATGAGATGGAATTGACAGGAGTAGATACCGACATCTGTGTCTATGAGAAACCAGTTGCTCAGCAACTGTTTTGTATGTTACACATCATGCTGTAAATTTAAAGTGTTTTTTTAGGGGTGGAATTGCTGCTGGTTTGGCATACAGGGGACGTTCTCAAGTATCACTAATGAATAACTACTTTCTGAATGATAAACGTTTTCACTTGCAGACAGAAGACAATGTAGACTCCTGGATATTTTCCCCAGTAGATATCATCCTACTTATGCAACAGTTCTTGGTTATTTTGTTTTAAAGACAGAATTATCAATTTTGTATTTATCCAGGTGGCTCAACTGCAGCTTACCTAGACATCGACGATGCCAACAATAAATTCATATTTCCCCTTTTCTTTGAAAAATCTTTGAAATCTCAAATCAGTGTTTTGCAACCTGGGGATATGTTTTCCTTCATGTTTTACACATTGCTAGAATGACTTTGTTCACAGCAGCACTGCACTTTTTCATTAGCTTTGGACTGCAGTGTTCAATAGTATTTTCATTTTGAACAGAATGTTTTCAGAGCTATTAATTGACCTTAACATTAAAAATAAGAATTTTACAAGTATACTGAATTGTAGCAAAAAATACACCTATTTTAACCAGTAGCTCTGTTTTTGCATGTTAGGGTCAAATATGCATCTGTAATGCATGTGACAGTCTGTTTTAAAGGTTTTACCACATAGACTCTTAAGTGTTATATCTCCTGTTATTCATGCTACACTACATGAAGTTAGTTTTTTCCTAAACGGTACAAATTTATGAACCATCATTTTTCACTTACTCAGTTTATGTAAATACTGCACTACAAAATCAGTCCTGAGGAAGAAATAATCATTTATTTATGTTAGAAATAATTTCTACAATAATCCTTAAAACTCAAAACCAAGCAAAAAACATTTGTACGATACATAGTATCTATTTGGAACAAAGATTTTTGTAACTAATTTCTTTTTTTTAATAAAGACAACTAAAAATCAT EMBV3_29732 TCATTATTACATTGAACGTCAGCTGGAAGGAGAGGGTCAGTAGAGCTGGGAGGGGCTGCT Gene GeneID:523408|IPO8:XM_002687718:19_cdna Constitutive 0 NULL GeneID:523408 5 GENE IPO8 NULL importin 8 EMBV3_28391 CCTGACCGGGTTATTGGAGCAGATGCAGGTTCACAGAGATGCGGAATCACAGCTGGTTTT Gene GeneID:520927|NT5DC3:XM_002687532:508_cdna Constitutive 0 NULL GeneID:520927 5 GENE NT5DC3 NULL 5'-nucleotidase domain containing 3 EMBV3_11084 ACCATTGGGTGGTTGATTTCTATGCTCCTTGGTGTGGACCTTGCCAGAACTTTGCTCCAG Gene GeneID:539876|DNAJC10:XM_002698514:103_cdna Constitutive 0 NULL GeneID:539876 26 GENE DNAJC10 NULL DnaJ (Hsp40) homolog, subfamily C, member 10 EMBV3_22298 CCAAGCCCAGGAGCCAGGGAACCGACGACCGGCTGGACATCCACTTCATCCACGTGAAGC Variant GeneID:535293|EPHX1:NM_001034629:74_cdna 65^433 2 EMBV3_13780 GeneID:535293 16 GENE EPHX1 MGC126963 epoxide hydrolase 1, microsomal (xenobiotic) EMBV3_24023 GAGAGGAGCTTCCAGATCAGAGCAGATGGGGGCAGGAGTTGGACAGCTTAGACATCCACA Gene BVT0102_261572 + 0 NULL GK000018.2:54178930-54185870 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35220 GAGTTGGGACAGAGCTGGAGCCCCCGCAGGGGAGCTCCTCCGATGGGCCTCCTCACTGCT Variant GeneID:528834|CIDEB:NM_001034567:182_cdna 429^619 1 EMBV3_26641 GeneID:528834 10 GENE CIDEB MGC127016 cell death-inducing DFFA-like effector b EMBV3_36453 TACTCCATGTCAACTTCTATTACTGCTTTTTATTCTTGAAGAGGTTAGTATATTACAAGC Gene GeneID:617339|FBXO36:NM_001082617:184_cdna Constitutive 3 NULL GeneID:617339 2 GENE FBXO36 MGC152144 F-box protein 36 EMBV3_16697 ACCACAACGAGTCCAACAAACAGCGGAGCCGCCACAAATCCAAGGATCGCTACTGTGACA Gene GeneID:327667|CACNB2:NM_175789:61_cdna Constitutive 0 NULL GeneID:327667 13 GENE CACNB2 NULL calcium channel, voltage-dependent, beta 2 subunit EMBV3_35729 TGCCCCGGGAAACTGTGGCTGTTTTACACACAGAGGAGGAGCTAGAAATTGCCGAAGAAC Gene GeneID:530088|KRBA2:XM_002695875:378_cdna Constitutive 0 NULL GeneID:530088 19 GENE KRBA2 NULL KRAB-A domain containing 2 EMBV3_34733 CCTCTGGGTGTCCCTGTTTGCTGCTGTCAGGGCACAGTCCTCAGGATGTTCCACCAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17123 GCAGAACGCACCCAGCTGCTGTACATGACACAAACCCAGTGTTGCTGTAAAGAATGAGAG Gene GeneID:788066|TPK1:NM_001080370:763_cdna UTR3_Alt 2 NULL GeneID:788066 4 GENE TPK1 NULL thiamin pyrophosphokinase 1 EMBV3_14992 AGTGGGCACTGTGTTGAGAATTCGTGGTTTAGTCCCCGACAAGGCTGGCAGGTTCTACAT Gene GeneID:100298130|LOC100298130:XM_002694977:149_cdna Constitutive 0 NULL GeneID:100298130 18 GENE LOC100298130 NULL similar to galectin-7 EMBV3_22700 AGGCGGCCTCCTGCATGACTTCCTGCACAGCTCCAGCACTTCCAGCTGACATCCATCCTG Variant GeneID:528008|LOC528008:XM_002697895:486_cdna 53^246 1 EMBV3_31773 GeneID:528008 25 GENE LOC528008 NULL hypothetical LOC528008 EMBV3_43312 GTGGGACCAATGGCCAGTATATCCTAATGGACAGAAATCTCCCACCCCTAGTTAGCACTG Gene BVV0102_181274 + 1 EMBV3_40251 GK000006.2:102666723-102687304 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14921 AGTACACGTGATTCGCAAGGATTTCAGCAGTGACCTTTCACCCACCAAACCCGTCCCTGT Gene GeneID:521974|TBX15:NM_001079775:53_cdna Constitutive 0 NULL GeneID:521974 3 GENE TBX15 NULL T-box 15 EMBV3_18345 GCAACTCAGGAAATGTGCGTCAAACAGTATTGTCTAGGTACTTCAGAGGAACTTTGGGGG Gene BVT0102_164325 - 1 EMBV3_38249 GK000016.2:65369038-65379389 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069951 TCONS_00069950 1 XLOC_042100 NonCoding TCONS_00069951 XLOC_042100 NonCoding NonCoding - 16:65377133-65377834 - TSS52053 701 1 TCONS_00069951_1 41 0.59058487874465 1 0 0 0 0 0 0 0 0 0 0 9.95348393906441e-10 0 7.82983701144276e-09 9.75205771516151e-05 0.000241574139323925 6.99882894348176e-06 0 0 0 0 3.07761526911317e-05 0 0.000137615547947093 0 2.39147421955852e-05 9.88333350591145e-06 0 0 0 6.92494870346152e-06 0.000102919833960578 XR_237875.1 LOC101905857 PREDICTED: Bos taurus uncharacterized LOC101905857 (LOC101905857), 0.0 673 100.00 0.530670470756063 0 noncoding GTATTAGTCACTTAAATTTTTGAACTCTAGTGCTTCCCACAGAGTCAGTAGTACAGAATATTTCAAGTTGGGATTGTTCCAGAGAACCCAGACTAATCAATTATCTGACCCCATCATACCAACCATCCTTATTTTTCACCTCTTTCACTAAGTTTTTTTCCTAACTCTTCTAGCTCACTCTGGTTAATCCCTTGTTTTAGTATTTCTCCTATGATTAGAATAACACAGCATTTACTCAATCTTATTTTCCTCGTGGGTTTGCTGTCTTCAACTAAAAACAAAACCATTCAGGGAAACACCTTAATCTTTTGTTTCTTTGTCTCTTTCAGGGTGTAACCGAGCAGGACGCCATGGGAGCTTCTGGGGACGGGCCTTCCCCCAAATGTTCCCCCAAAGCTCCTCTGAAGTACCTAGACAATACTGTTTGATGCACATTTCCTGAGTTGCTTTGCAGACGTAAAAAACCTCCTCTCTCCAGCAAATGGAAGATATTATGACCATGAGTCAATTGGAGCCTAAGGACCAATTTTTTTAAACCCTGTGACACCACCCTCACCATCAGCCAATCAGAGAATTGTGACAAGCTGATCGCAGACTGCCCCCTCCCATCTGGTTTGTAAAAGAGCTTTGCAAGAGCTCAGGGCTTTTAAGGCATAAGCTTCCTGTCTCCTTGAATGACCTTGCAGTAAACTTTTCTCTGC TCONS_00068000 TCONS_00067999 r 5' 1556 TCONS_00068000 TCONS_00067999 r 5' 1556 EMBV3_02470 CCACTTCATGCAGGACTTAGCACGCTACCGGCAGCAGTTGGAACACATCATGACCACCAA Gene GeneID:512420|LOC512420:XM_002694815:679_cdna Constitutive 0 NULL GeneID:512420 18 GENE LOC512420 NULL hypothetical LOC512420 EMBV3_39456 ATGATTTCCAACAGCGGACTGCTCACCACCCTGTGGTTCGTCTTCCTCCTTGTATCGTAT Gene GeneID:514071|LOC514071:XM_002693834:122_cdna Constitutive 0 NULL GeneID:514071 15 GENE LOC514071 NULL similar to olfactory receptor 1427 EMBV3_00345 AATAATAATTTGCACTTATATAGCACCTTTCAACCAGGCACCTCAAAGCGGTTTAACCAC Gene GeneID:617007|RAD51L1:XM_002690981:254_cdna Constitutive 0 NULL GeneID:617007 10 GENE RAD51L1 NULL RAD51-like 1 (S. cerevisiae) EMBV3_26634 CAGCCACTACCTGCTGCTGGGCAGAACGGCTGGCGGCCCAGATCCTACACGCCTCGTCCT Gene GeneID:785970|NTN5:XM_002695111:589_cdna Constitutive 0 NULL GeneID:785970 18 GENE NTN5 NULL netrin 5 EMBV3_18786 TGCCAGAAGGAACTCAATTTCCACTCTCCCAATCAAGCTGAAACTCTCCACAGGAAAACC Gene BVT0101_070459 + 0 NULL GK000003.2:20116645-20141821 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168976 TCONS_00168977 TCONS_00168979 1 XLOC_103242 Coding TCONS_00168977 XLOC_103242 Coding Coding GOLPH3L 3:20079815-20128009 j TSS126617 3149 1 TCONS_00168977_1 285 0.0663702762781836 5 0.934762309879028 0.000448239734066608 0.00116915109954119 0.00107663387260908 0.000487399380765564 0.00119077442656945 0.000439113522833742 0.000474570777129385 0.000403610714906286 0.00119333528850359 1.26548027783625e-09 6.49627065316236e-09 3.69031002970487e-08 0.000365852410497506 0.000426589257697332 0.000371215488557908 0.00402716417972307 1.63075568547526e-07 0.00234804326745809 0.0011441719065485 0.00121126153393219 0.000761293736193901 0.000624055126844783 0.000979094710410123 0.000278697933030343 0.000829283135440975 0.000664866523462521 0.000690094064192794 8.81377701603954e-05 4.67170947933243e-05 6.15011454138294e-08 XM_005203908.1 GOLPH3L PREDICTED: Bos taurus golgi phosphoprotein 3-like (GOLPH3L), 0.0 5514 100.00 0.970466814861861 NM_018178.5 GOLPH3L Homo sapiens golgi phosphoprotein 3-like (GOLPH3L), mRNA. 0.0 2181 85.84 0.598285169895205 TCONS_00168977_1 sp|A6H7F6|GLP3L_BOVIN GLP3L_BOVIN Golgi phosphoprotein 3-like; 0.0 580 100.00 0.996491228070175 1 coding 0 0 0 0 -0.0672817912882993 0.622512654570181 -0.0975150875054158 0.097280345062711 TAGGTTGCCTAGTGATCCTGAGGAAGCTGATGTGTTATTCCTTCTCTGCATCGAATCATCAGGAAGTTTGTTCTCTCTGCGTGGCTGAGAAGTTTTTCACCTAGCAGGACGGGGGTAGGGGGTGGGGGTGGGGACAAATGTCCCCATAAAATAGAGCGCAAGCTGCAACCTGCGTTTGGCTGTAACCCAGGAGTAACGTCAGAAACAGGTGAGAATGACCACCTTAACTCACCGGGCCCGTCGTACTGAAGTGGGGAAGAATTCTGAAAAGAAGGTAGAAAGTGAGGAAAACGTGAATCAAGACCGAAATCAAGACAATGAGGACATTGGAGACTCTAAGGATATCCGCCTCACCCTTATGGAAGAAGTATTGCTCCTGGGACTAAAAGATAAAGAGGGTTACACATCTTTCTGGAATGACTGCATATCATCTGGCCTGCGAGGCGGCATCCTGATAGAGCTGGCCATGCGAGGTCGAATCTATCTAGAACCCCCAACCATGCGTAAGAAGCGACTACTAGACAGAAAGGTACTGCTAAAGTCAGACAGCCCAACAGGTGATGTTTTACTGGATGAAACTCTCAAACACATCAAGGCAACTGAACCCACAGAAACTGTCCAAACATGGATAGAGCTACTCACCGGTGAGACCTGGAACCCTTTCAAATTACAGTACCAGCTGAGAAATGTAAGAGAGAGAATTGCAAAGAACCTAGTAGAGAAGGGTATTCTAACCACTGAGAAGCAGAATTTCCTCCTATTTGACATGACTACTCACCCAGTGACCAATACAACAGAGAAGCAACGACTAGTGAAAAAACTTCAAGATAGTGTCCTAGAGCGGTGGGTAAATGACCCTCAGCGTATGGACAAGCGAACACTAGCACTGCTGGTGCTAGCCCACTCCTCCGACGTGCTAGAGAATGTCTTCTCCTCTCTGACAGATGACAAGTATGATATGGCAATGAATCGAGCCAAGGACCTAGTAGAGCTGGACCCTGAGGTAGAGGGGACAAAGCACAGCGCCACGGAGATGATCTGGGCTGTGCTGGCAGCCTTCAATAAATCGTAGCAGCTGTTGGGTTTCTCCTTTTCCATTGCTGGCCAGTGACTATCAGAGACACCATCACCGAGTTTTGTGTGATGAGATGTTTTCCATCATTTTTTTTTCCCTCTTGAATCAAATTTGTTATTTGGGGAAAGCAACTTCAGGGCTTCTCCATAGACCTTGTCTCTTATAAGCAGGCTTTATATCTCCCTATACTTCGACTCCAGAGGTGAATAAATTGGGTGAACCAGCACTCACCCAGTAAACATTTTCTCTCATTTCTTGGCTCACTTCCATCCAGTGTGCTTTTGGATTATCAGGAATATTTCAGTGAGATTTGGATTTCTCTAGCCATAGAATGTGAGTGAGATGTAGAGCAAACCATTTATCTCATTTTTTAAAATTTGTTTTCTGTCTTAAATATATGTTTTCAGCCTATCTCTCAGGCTCTGCTAAGTAATGTAGCTTATTGAAGTAACCATCTCTTTGAATAAGGGGCAGTGGAAATAAAACTGATTTTTGGAGCAGATGGTCTCTGAGATACAAATGTATGTTCCACTACTGATTTTCTCATCTTTCCTTTTCTAAATTAATGAGACTATTCCAAATGTGATTACCTGGTTCTCACAGTCCTAGAACCATAAATATATTCTCTACTGTCTCTCAGCATTGTCCTACTCCATCATTCATTAGAACAGAAATCTAAATTAAAAAAAAAAAATGCATCTCTTAACCACCTCTTTTATGCAGTCACCAATACAATTTGCAAAGAAGGAAAGTGGCATCAGAATTTCCACTCTTTAGCATATGACTATCTGGATTCCTCCAGGCTACTTTAAGTGTCTCTACTCTGATTGAATTTAGGGAGTTGTAAATTTCAGTTGCTGAATAGCACCATCCTGAGTCCAGACAATATATGTAAACTCTAGATCTTGTTCCCTGTTTTGGCTTCCTACATAAATCGATGGGTGTGCGTGCTCAATCACTTCAGTCGTGTCCAATTCTTTGTGACCCTATGGGCTGTAGCCTGCCAGGTTCCTCTGTCCATGGGATTCTCCAGACAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTTCCAACCCAGGAATGGAACCCGCGTCTCTTAGTCTCCTGCATTGGCAGGCAGGTTCTTTACCACTCGTGCCACCTATTCTGTGTGTGTTTAAAGGTCCTGGAAGTAGTTTTATCTGTATTTAATCCACAGATGCCCTCCTAGTCATTAGTCTTGTCTCAACACAATCCTTTGTCTAACTCATTCTTTAAAACATTTTTTAAGTCAGTAGTAAATGCAAAGAGAAGCTTATTGAGAAAAATCGTATTCAGAAGGGCAATTTGATGTTAAAAGCATCCTATATAAGTCCAGCATTTGGGAATATAAAGAGGACAGGCACCAAACTGTGCTAATGTCAAGCATTTAATGCTGATACTTGAATGGATCTTGCCTCTTGACCACTACAGAGAAACAGTCTATCAAAGGGCTAATACAGATGACCCAGACCTGATATCAAATTTTCCTGATCAGAAGTAATTAAATGAAAGATTGTAACTTTCCCTCCTCTAAAATTGTCTAGCCCCACAAAATTCCCCAACTCACTTAACTTTTTTTCACTTTAGGTTATCACTTAGGTGACTAAAGATAAAAAGTTTAAATGAAACAAATTGCTAAAAAATGTGAAGCTGAGAAGAGCTTCAGTCTGGCTCCCTAAAACTATAAAATCCAGTCCGTGGATGTGTCTACCGGACTTAGTTTTTCTTTCCATTTGAACAGTTTGGCATGAATTTAAACCAGGTTTTCCTGTGGAGAGTTTCAGCTTGATTGGGAGAGTGGAAATTGAGTTCCTTCTGGCAACTCTTGGTCAGTGTTTATTTTTATATTGTATCTCATTAAGATGAGGATGTCTTCAGTTTGAATCTGCATAATGTTCACTGCAAAACACCATTTAATGCATATGGCCTTCACATTTCTGTGTAATAAAGATCAATTATTGGCTCCCTGGTCTCTCTGTGCAGTTTTACAACTAAAGTTATTTTAACTTGAAATAACCTTTCATACAAGGCCAGTAACACTC EMBV3_06021 AAAACTTTCCAGAAGGTGCTTGACCAAAAAGGAACCCCCAAGCGACTGCAGACAGAAGCC Gene GeneID:783254|SAMD12:XM_002692719:153_cdna Constitutive 1 NULL GeneID:783254 14 GENE SAMD12 NULL sterile alpha motif domain containing 12 EMBV3_13142 TGCTCGTGGGGAGTTCCAGCAGAAGGATTTCTCCGAGGCCTACGAGCGGTATCACACTGA Gene GeneID:614679|HEXIM2:XM_002696049:348_cdna Constitutive 0 NULL GeneID:614679 19 GENE HEXIM2 NULL hexamthylene bis-acetamide inducible 2 EMBV3_13585 TAAGCGCTGGTTCGTCCTGGTGGATCGCTGCCTCTTCTACTACAAAGATGAGAAGGAGGA Gene GeneID:532773|PLEKHA6:NM_001075973:76_cdna UTR3_Alt 2 NULL GeneID:532773 16 GENE PLEKHA6 NULL pleckstrin homology domain containing, family A member 6 EMBV3_38319 CAGTTAGAACTTGTGGTAAGATACCTCTTAAAACCTTACCAAATTCATTTCTGTGGTAGG Gene GeneID:535702|KLF5:NM_001083727:2_cdna Constitutive 2 NULL GeneID:535702 12 GENE KLF5 MGC139218 Kruppel-like factor 5 (intestinal) EMBV3_28494 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTTGACCTATA Gene GeneID:100296593|LOC100296593:XM_002695859:329_cdna Constitutive 0 NULL GeneID:100296593 19 GENE LOC100296593 NULL hypothetical protein LOC100296593 EMBV3_27701 GCGACTGGCAGATTGCTACTCTGGCTTTACTCTTGGGTGGTGCTGCCATCATTCTCATTG Gene GeneID:541164|TMEM47:NM_001076262:43_cdna Constitutive 0 NULL GeneID:541164 X GENE TMEM47 NULL transmembrane protein 47 EMBV3_05659 CTTAACCACTAGAATGTTAAGAGCCCCTTTCACCTGAGGGGAGTGAAAACCTATCAAACC Gene GeneID:338047|DDHD1:NM_176643:21_cdna UTR3_Alt 3 NULL GeneID:338047 10 GENE DDHD1 NULL DDHD domain containing 1 EMBV3_07556 CTAGCAGTCTTTCGATAGCCATATATCCTGTATTTTGTTGTTTTAAAACACAACTTTCAC Gene GeneID:281613|AK3L1:NM_174237:41_cdna Constitutive 2 NULL GeneID:281613 8 GENE AK3L1 AK3 MGC137322 adenylate kinase 3-like 1 EMBV3_00661 CAAGAATTTGGCCCACACGGAGATGCTGCAGGATGCCTTTAGCCTGCTTGCCTACTCAGA Gene GeneID:519736|RANBP10:NM_001098125:273_cdna UTR3_Alt 2 NULL GeneID:519736 18 GENE RANBP10 MGC143268 RAN binding protein 10 EMBV3_39070 ACAACGGAGCTGTGGTTATTCAGCTTCCACGCGTCTCTGAAAGTGGTGTCTCGTCGGTGA Gene BVT0102_220508 - 0 NULL GK000015.2:22990479-23807380 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058564 TCONS_00058565 1 XLOC_036132 NonCoding TCONS_00058564 XLOC_036132 NonCoding NonCoding - 15:23667563-23671438 - TSS44086 988 1 TCONS_00058564_1 110 4 0.745998967475478 0.000151465186023263 0.000376308009180076 0.000112386126932589 0 1.54364259142415e-09 0.000278774510373955 0.000265608283694939 0 0 0 0 0 0 9.51698739076581e-06 0 0 0 0 0.000116120950196474 0 2.02687185062056e-14 0 0 0 4.90809647039043e-05 2.05609793233468e-32 0 0 0 0 0 noncoding 0 0 0 0 0.0195089942721824 0.877456137030068 -0.0323593944997632 0.564540452591072 CCACACCATGCCAAGGTCCACTGGAACTGAGACGGTCTCCCCTTTTCCTTTTCCATGTGCTGCCGCCGCCAGGGGAGGGAGCCGTCCACCGATGCGGTAGTTCGTCAGACCCAGCCAGGCTCTGAAGCCCTCCCAGGGTCTGGCGGACCACTGAATAGTCCACATCTTGTTTGCCTCGTGTCCCAGCACCTCGCAGGGTGCCTGCCTCGTACCTGCGGGTCAGGTGGTCGGGACGGGTCCGCCCTGGGAATCCAGGCTCCGGGCCCGCATCCCAGCAAGCAGCCCCGCTGCACTGCGCCTGCGCCACCAGAGGCCCCTGGCTTGGCTCCCAGGCCCGGGGGCTCACCGACGAGACACCACTTTCAGAGACGCGTGGAAGCTGAATAACCACAGCTCCGTTGTGGATGTTGCCTGTGGGACAGGCAGGGGGCTAAGCGCAGGCTTTCTCGGCGAGTCTTCATACAAATCTTGGAAGGATCTTCAACCACCTCCAAAAAGGAAACCAGGCCCTCTGCACTGGGCTGGGCTGGCCAGCCCATCCCTGGGGGTCAGTGGACCCTCCAGAAGCGCCCCTCCCAACCCTGGCTCCTCCTCCAGTCCCTTCGAGCACAGGGCCTGGCACGAAGCATTCAGAGTCAACACGTGCTGAATGAACGAAAGCATGATTGAACGAAGGAGTTGACACAGCTGCACTCTGCTTCCAGGACGGAAGAATTGGAGTCAACATTTAAATGAAGCAAAAGAAATTTAGTTTAGCTACAAGAAGTAAACTTTCCAGAAAACCTCTGGAGAGGATGAGCAAAGAGTTTGACACACACACATCTGTCACTGAGGGTGAGAGAGGAAGGAGTCTGTCTTGAATCAGAAAGATGGTTAGCTGGCCTCTGGAAGGTCCCACCTCCCAAGGAGGACAGGATCCTGGTGTCACCACACCCATCGCCCCCATCTTGCATAGCAGCTAATAAATTGCCTTTTTGTTTAGCTTCTC TCONS_00058566 TCONS_00058567 TCONS_00058568 TCONS_00058569 TCONS_00058570 TCONS_00058571 s 5' 135943 TCONS_00058566 TCONS_00058567 TCONS_00058568 TCONS_00058569 TCONS_00058570 TCONS_00058571 s 5' 139817 EMBV3_25937 GTGTATTTGACCTTCGGCAACGACAGCAGAGGCAACTTTTCCAGAGCCATGATTCTCCTG Gene GeneID:534524|DMXL1:XM_002688999:23_cdna UTR3_Alt 2 NULL GeneID:534524 7 GENE DMXL1 NULL Dmx-like 1 EMBV3_26582 TACAAACCTACCAAAGGTTGGGAAGAACGGACCAAAAAGATAGGACCAGCAGGCTCTGGG Gene GeneID:509840|CCDC112:XM_002690429:149_cdna Constitutive 0 NULL GeneID:509840 10 GENE CCDC112 NULL coiled-coil domain containing 112 EMBV3_02596 AACGGGGCCATCAACCCTGTCATCTATGCCGTTCGCAACCCCAACATTTCGATGCTCCTA Gene GeneID:781195|GPR135:XM_002690992:284_cdna Constitutive 0 NULL GeneID:781195 10 GENE GPR135 NULL G protein-coupled receptor 135 EMBV3_36121 CAAGTGCTCCTGACCTGCTGCCCTCCAGGGAAGCCACCGAGGAAGAGGGCTACTGAAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29775 GGATAAGAGCCCCTTGTAGAGTTGGGGCTTGACTGATTGGATCCTCTGCTGAGAGTGAAC Gene BVT0102_238780 - 1 EMBV3_10710 GK000028.2:35360794-35366023 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04283 GATGGCAAGCTGGACCTCACTGTTGTGGAGAATGGAAGTTTGAAAGCAAAACCAGTGGCA Gene GeneID:618880|VRK1:NM_001038224:321_cdna Constitutive 0 NULL GeneID:618880 21 GENE VRK1 MGC128186 vaccinia related kinase 1 EMBV3_24353 AACATACCGCTCTGTTTCGAACTGGGCCCTTTCGCGTGTTAGGCGAACGTGATAACCACT Gene BVT0102_406148 + 0 NULL GK000003.2:20903572-20961926 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03458 GACCTACCTGGATTTTGTTCTTGCATTAGAAAACCGCAAAGAACCGGCAGCTCTGCAGTA Gene GeneID:533147|PPP2R3C:NM_001015645:35_cdna Constitutive 0 NULL GeneID:533147 21 GENE PPP2R3C C14orf10 protein phosphatase 2 (formerly 2A), regulatory subunit B'', gamma EMBV3_18398 GCAGTAGCTATCATATAGTGAAACAAAGCAGTGAGCGGAAATACCATTCTCTTGTTTTAG Gene BVV0102_137096 + 0 NULL GK000008.2:102639113-102666737 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226470 1 XLOC_138010 NonCoding TCONS_00226470 XLOC_138010 NonCoding NonCoding PTGR1 8:102662962-102700559 x TSS169321 3201 2 TCONS_00226470_2 67 0.675101530771634 2 0.914911160761783 3.86082448316686e-05 6.27831604701676e-06 0 2.20510404945211e-05 3.47036224116104e-06 1.11747985575262e-06 3.79550131877411e-06 4.98897890965282e-05 2.71137997070521e-05 0 2.85781781738925e-06 0 0 0 0 0.00674699265410625 0.000361285923169612 0.0017722006599664 1.12010819803281e-06 2.0423814095095e-07 0 0.00141126893611371 0.00129778706520165 0.00151852037126026 0 0 1.83040902485063e-06 7.97014762336564e-05 3.63403032543229e-05 0.000101167482715732 XM_005228564.1 CD1C PREDICTED: Bos taurus CD1c molecule (CD1C), mRNA. 1e-57 230 85.22 0.0618556701030928 0 noncoding 0 0 0 0 -0.0350913696777538 0.858626816360075 0.0367494478251633 0.486408760435641 CCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGCTGCCGTCTATGGGGTCACACAGAGTCGGACACAACTGAAGTGACTTAGCAGCAGCAGCAGCATATTCAGTGTGATCCTGCCACTTTTTGTCTTTGATTATTGAATATTTTGCAAGCATTCCTTTTCATTCAAGAAAGATCTTAAATTGAAATTCCCAGAAGAGGAAATTTTTGTAAAATTCTTTTATAACTCAACCAAGGAACATTGGTAAAGAACACAAGATCATTAAAACATTATTTTCAACATTTTCATAAACTAGCAGTGATTACATCATTTCACATATGTACTGAAGGATTTTAACATCTATTCATGACTCCTGAAGTCTGCTTTGGAAAACTGAACAGATATTTGCAGTAGCTATCATATAGTGAAACAAAGCAGTGAGCGGAAATACCATTCTCTTGTTTTAGAGTTCCAATATCTTTGGACCTAACATAATTTCAGTCTTATCTTTATGAAAGAAACTAATTTTTCTGTCTCTTGCTGAAATTCTTCTTTGTCAGGTTTAAAATGTCAAAAAACATGTCATGAGTTTGAGTTTTTAGGCAATAAATTGACATTTCTTTGTAAATTTGGATGTTGAGACAGAATGTACTCAACGTTTTCATTTGGCAGTGTCTTACATTACACATCTAAAGCTAAGTACTTGAATTTTTCTAATTTTGAGCCAAATGATCTTTGATATTATGAGAAGCTTCTTGTATTCTAGGAGCAAACTTAATTAAAGGGTTAGTTAAAAATTTCAATTTGTACGTGTCCTTTTAAGTCTTCCTCATAATTTTCTAGTTAGATTACCATAACTAAAATGGTAATTCCTTCTGTCTTCTCTCCATCTGAGATTTGTGTGTGTGTACACGCATGTGCACAAGTATTCAAATCATCTTATAGTTGGCCAAGTATAAACTCAAAATCCTGTTAAAAATTGTTTTATTGTTTTGATGGAAATGTAATTCTTGTTTCATAAGACTTCATGGATTCTTCTTGTACTATTAGGAAAATACTTATTACTAGAGCGTTGCTAAAAAATGGCATAACTATTAGCTGCTGTCTTATGTAGTGTCTACTGTATTGAACACTTGTGTACAACAGCCTTCTCATTTTGCCGTGCCTGCAGTGAGTTGCAGTTGCTACTTATCATGGAATGTGTGCTGTAGCTTCTTGCACTCTGGTTTTCTTTGCTGTACTAGTTGTGGTACTAGCTTCTGTATTGCACTGAATTCTGCCTCAGTAATATGCCTTCATTAAAATTAAATATTTTTCCATGTTTTTTAATCTAGGAAGTAATTTTATTATATTGCAACGAAAATAGTAAGTATCTCAACATATGACTATGGTTTACATATAGATGTCGCTGTAACTTGTGCTGTGTGTATAGGTGTGCTCTCACTTGTACTATCTACATAAAATATCCAAGTAAACACTTCTGTGATGTTACTTCAGTGCATAGAAAAAAATCGTCTGAACTGAGTCAAGTCTGTTGATAACTAGATTGGTGGAGTGTTTATCTGTGATAACTAGAAATTATGCACGTTCCTGTACAAACATTACAGTACAACAGCAACATCCTACGCTGTGCAACAGTCGAAGTGAATTGTAGTTCTACCAAAACAATAAAGTTGTGTTTAATGGAAAAATACTCACTCTGCCTCAGTTTTTTAAACCTTGAAATATGGCACTGTGCATGTTTCCAGTACACAGTGGCTTTCAGCGGCTACCATACTGAATAGTACAGAGTTGGAGAACGCAGTGCTCGCCACACAGCCCAACGAATCAGAGTGCTGTAACTCAGTAAAAGTTTATTTTCCAGTCAGGCCTCAACAGTTTCTTTCCAACATTTGCTCGTTATGCCATCTGGAACATACAGCCTCCAAGGTCTCAGAGGTAAGGAAAGCAAGACCTGGAACATTATACAAAGTTTTCAAACACTGGCCTGAAAAGAGCTTAGAACCATGGGTCCCAGTTTGGTGCCAAGGTGTCCCCAGAGCACTGTAAGGAATGCATAAGAGCTGCCTGAAAGTAAAAGTGTTAGTCACTCAGTTGTGTCCCATTCTTTGCGACCCCATGTACTGTCACCCACCAAGCTCCTCTGTGGGATTTCCCATACAAGAATACTGGAATAGGTTGCCATTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCTAGGTCTCCTGTACTGCAGGCAGATTCTTAACCATCTGAGCCACCAGGGAAGCCCAGGATATTTTAAATTTTAGGGAAATGTGTGTGTATACACATACACACATATACTCGACATCAGGTTTCTGATCTAGTATCATCAGTCTGTCCTAACAATGAAAACATTGAGCATAAAAAAACAACCCTTTGAGATGCAGCAGAGACCTGAGGTCATGGGGTAAACTGCTGCCCCAAGTTGGGAGAGTCAGATACCGAGTCACAAACTACTGGGATCGAAGCCCTAAAGTAAAACCCTCCACGTGACACAGGGTGGGCTCAGGGACCTTCACCTGGAGGGGGCACATTTGCTGGAGGCTCTGTATAGACAAGTTTGAGAGGTAAAAACATGAGGGGGCACCCAGTCTTAGGGGTGACACCTCTCGTATATATGTTTAATTTCTCCCATGTGGAAAGAGGACACAAAAAGGCAGAAGAACTTTTTAAATTGTATTTGTAAATATTGAATAAATAATTTCAGTAGATTCAGAATTCAAAAAGTTCCAAAGGGCATATATTATAGTTTTTCTCTTATCCCCATCCTTTAGGCACACCTCACTTGTCTTCCCTGGGGATGAAGCATATAATCGTATTTATTACCTCTCACCGGAGGTTTTATACATGCACACACACACTTTTTTCTCTCGTTTTTTCGTTGTACTACAATTTAATCCCTCCTCTATTTGGTGGCAGAATCAGTTAACAGAATTGACATTTTCCTGATGACTAAACCATCGAGTCCAAGAACTAGGTAACCTTGCCATGTTCAGTCTTTTGTGTTCCTCAGTGATGTTTTAAAACTTTACTCAGAATAATCTCACATTTTCGTAGGCTTATAAAGATTGCTATGTGTTACTGTTTTTGTAGCTGCTGTGAGTGATAAATTCCTTTCTTGGTCTGTCGTGTTAGACCCACCTTTGGCTGATGGTTACACAAGGAGAAATAAC TCONS_00228914 r 5' 0 TCONS_00228914 r 5' 0 EMBV3_10970 CTTTTATTATTTTTAGAATTCTGCCTTGGAAATGTGCTCTTCCCCTTGGGGTGGCCCCCG Gene GeneID:614948|C7H19orf22:NM_001046548:95_cdna Constitutive 2 NULL GeneID:614948 7 GENE C7H19orf22 C19orf22 MGC137387 R3H domain-containing protein C19orf22 homolog EMBV3_29971 CCACTATAAGGCCCCCACTGTGGTCTTGCACATGACTAAGACAGATCCTTCTCTGGAGAA Gene GeneID:521364|FZD9:XM_002698189:717_cdna Constitutive 0 NULL GeneID:521364 25 GENE FZD9 NULL frizzled homolog 9 (Drosophila) EMBV3_21001 TCCATTTGCAGCCCGAGCACCAAGGCAGAGATTGTTTTGAAAGTTTGCCCCGTGCCATCT Gene BVT0101_019638 + 0 NULL GK000001.2:59398367-59419637 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007931 1 XLOC_003491 NonCoding TCONS_00007931 XLOC_003491 NonCoding NonCoding - 1:59414790-59415460 - TSS5008 670 1 TCONS_00007931_1 54 1 0 0 1.49976715842681e-05 0 0 0 0 0 0 1.17763255004503e-05 0 0 0 0 0 0 7.88408183399695e-05 0 0 0 0 0 0 0 7.50656300255586e-05 0 0.000220827938267665 0 0 2.17370253092032e-05 0 XM_005247325.1 ZBTB20 PREDICTED: Homo sapiens zinc finger and BTB domain containing 20 (ZBTB20), transcript variant X1, mRNA. 6e-160 567 78.82 0.997014925373134 0 noncoding 0 0 0 0 0.0197438092001701 0.894702963226183 -0.0142027635520545 0.796855447971347 AATGATGCTTTGGGTTAGTAGTTTCCAGACTCTGTGTTTACAGGAACACTGAGTCACCACAGCTTTCCTTCTTGGGGAGGTTGATGCAGCATCACAAATGGCAACTCTGCACAAATAGCTGTTGGGAATGTTCTCTCCAGAGCAAGAGCTCCTCTGTGCCCCTTTTTTGTCTCCATTTGCAGCCCGAGCACCAAGGCAGAGATTGTTTTGAAAGTTTGCCCCGTGCCATCTATTTCCTGGGCACCTAGGAGAAGAGCCCCTTTCTCTGCGAGAACACAGAAGGGGAAGCAGCTGCGGCCGCCCCTCTGCAAGGCTGCACTTGGCCTTGGGGAGCCTGGTGTGGCTCAAGCACCCTCTTCACACACTAGGCACTGAGGGGCACTGGGTTGCCTGGCTCTTCTGTGGAATCAGGGAGTCTATTGAAATTCTAGTGCGCCCTTCCTTTTGTTTGATACCAAGTCACATGGTTGTGTCTTTAGTGTCCTGTTTTTCTCTTTATAAAATCTTTCTCTGGGGGACAAAATTGGCCATTTAAATAAAGTTCTTTTATAGCGAGTAAAGAGGTTTCTCAGAGCCAGAAATCACTCAAAAGAAAGTCTGTTGACCCTACTCGTGGAAAATCCCAGAGCTTTCTCTAAATACATCTTGCCAAACCTCCTAGTTTTGTGAC TCONS_00003445 TCONS_00003446 TCONS_00003447 TCONS_00003448 TCONS_00003449 TCONS_00003450 TCONS_00003451 . 3' 3852 TCONS_00003445 TCONS_00003446 TCONS_00003447 TCONS_00003448 TCONS_00003449 TCONS_00003450 TCONS_00003451 . 3' 4521 EMBV3_14109 AGCTGCTGAAGCGGAAACTTCAAAGCCTGCCTGATTTACACGACAGCTACGTGATGCAAC Gene GeneID:782207|LOC782207:XM_002685170:187_cdna Constitutive 0 NULL GeneID:782207 1 GENE LOC782207 NULL similar to CTAGE family, member 5 EMBV3_14406 TCCATGAACTGTCCCCACCACACTTTGAAGATGACCCTGTCTGCCCTGCTGAAGTCTCCA Gene GeneID:506272|TMEM221:XM_002688575:272_cdna Constitutive 0 NULL GeneID:506272 7 GENE TMEM221 NULL transmembrane protein 221 EMBV3_41638 AACATCCTGGCGGTCTCTGGTGGAGACAATAAGGTGACCCTGTGGAAGGAGTCGGTCGAT Gene GeneID:512530|SEC13:NM_001075565:110_cdna Constitutive 3 NULL GeneID:512530 22 GENE SEC13 NULL SEC13 homolog (S. cerevisiae) EMBV3_43422 GCCCCGGGGAGGCCCCTAGCCCACTAAACCCTTCCTAGGTGGTGTCCTGGTGGCACTCAA Variant GeneID:532459|TMEM115:NM_001083461:226_cdna 393^840 1 EMBV3_23025 GeneID:532459 22 GENE TMEM115 MGC137897 transmembrane protein 115 EMBV3_06659 CAAACCAGATTGTTTCAGATGCCTTGCATATTGCACGACGCCTTGTCTCAGAGCCCGATC Gene BVT0102_127200 + 0 NULL GK000029.2:47607010-47656593 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165658 1 XLOC_100586 Coding TCONS_00165658 XLOC_100586 Coding Coding FGF4 29:47654257-47657618 = TSS123701 2619 4 TCONS_00165658_2 87 2 0.221130952380952 0 0 0 0 0 0 0 2.25838658159703e-06 0 7.85508384246038e-06 1.74813033589999e-05 0 0 0 2.55957243295903e-13 0.00644250146666434 0.000439352762236376 0.00343868260156377 0 0 0 0.00367436016709123 0.00106194782582049 0.00218279504547173 0 0 0 0.000678942374062729 0.00091197901424629 0.0023851525725773 NM_001040605.2 FGF4 Bos taurus fibroblast growth factor 4 (FGF4), mRNA. 2e-141 508 100.00 0.106911034746086 NM_002007.2 FGF4 Homo sapiens fibroblast growth factor 4 (FGF4), mRNA. 3e-152 544 81.01 0.208476517754868 TCONS_00165658_1 sp|P48803|FGF4_BOVIN FGF4_BOVIN Fibroblast growth factor 4; 1e-45 148 100.00 0.985294117647059 1 coding 0 0 0 0 -0.0739326296535606 0.49226016317226 -0.0203374637354873 0.80473911666622 AGGCCTGCTGGAGCTGTCGCCGGTGGAGCGCGGGGTGGTGAGCATTTTCGGGGTGGCCAGCCGGTTCTTCGTGGCCATGAGCAGCCGGGGCAGGCTGTACGGCTCGCCTTTCTTCACCGACGAGTGCAGGTTCAGAGAGATCCTCCTCCCCAACAACTACAACGCCTACGAGTGCGACCGGCACCCCGGCATGTTCATCGCCCTGAGCAAGAACGGCAAGGCCAAGAAGGGGAACCGGGTGTCCCCCACCATGAAGGTCACCCACTTCCTCCCCAGGCTGTGACCCTTAGCGCCCCCCCGGAGGGGAGTACCGAGGGTCCCCTTGGTGCACTTTCTTCAAATGGACGGTTGAATGCCAGAGTAGGTGTAAGATATTTAAATTAATTATTTAAATGTGTATATATCGCCGCCAAATTATTTATGGTTCTGTGGATGTGTTTTGTATTTTTCTGGAAGAACAAAAGCAACCCCCCACCCCCACCCCCAACCAAAGCCTGACTTTTTCTGGTAGAACAGTAGAGACCCTTCCACTGGGTTTACTCAACTTGTTGGAAAGTTGTCACAAGTGGCTGCTGCTATTCCATGTATTAAACCCGGTGATGTCAGCCTCCGATATCAACCCACGCTTTGCACTGTCCCCTGTGGCTTGGCAGTGAGCATCCTTGTGCCTGGAAACGTTTCCTGGGGCTTTGGAAGCCGGTGAAGGAAGCTCCCAGGCTTGGCTCCCTTCCTAGCATCCTGCACTGCCCCACTCCCTTTCTGCCCTGAAGATATTCCTCGGGACATATCGGTTTACTTCGGGTACAGAAAGCGCACTGTCGAGGCCACCGCTGCCACTCCGTTTTTAGATCTGCCATGTATGACCTTTGAACTTTGCTGCAGTCAATCTTCCTCAGTCTACCAGATGGGGGAGACCCGTGGGCAACTTTATAAACTCCTGTTTTCCTTTTTTGGACTGGCCACAGCCACTGTTTCTCTGTGGCTATTGGGAAAGGGCAAAAACAAAGTGATTTTGTAAAATCTGATGGAGAGGAATTGATATTCCACTAGGAGGCTGGGAATGGACAAGATTGGATTTATAACCACCCCCGAAAACCTGAGGGGTGAGAGACAGTTTGTGGTGTGGAGACTTCTGATAAGTAATAGCACACACACACACACACACACACACACACACATATATGTATATATATCTTCTTTTTAAAAACACACTTCCCTGTGTTTGGGAAGCTTTGGGCTGGAACTAGCTGTTCATTTAGGTGAAATGTCCTTGTAATTGTCCAAAAACACTTCAGGCAGTTTGCATGCGGGAAGGTGCTGCTTCTGTCCGTTGCATTCCTGATTAAGTGGATTTCACATCTACCTCAAAAGCCCTTGAACTGCTCATCTGGCAAAATCTGCAGAAAGCTCAGACCGAGTGTAGAGTTCTGCCATCCCAAGTGGCTTTTTTTTTCCATATGTAGCCAAAAAGGATTGCAGATAGCGTTTGGTGCGCCCCATTCGAACCTTGTCACGTTTGAGCTATCTTTACCCCACGATTTACTTTTAGTAAGGATAATCATCGTGAAAATATTTGCAGACAGCTGTTAGAGTACACTATATGGTCACCAAGTAACCTTATATTTTTCTTTATATATTTTACAAATGTAACCCCTGTCCTGGAAGCAAAGATGGAAGAGGCAAGGGTCGGTGAGGTTTAAAAAAAGTTCCGAGGTGATGGCAAACATTTAATTTTAATGAATGACTTTTTCGAGTTTATACAAAATGACCTTAGCTTGCTACCAGAAATGCTCCGAATGTTTCCTCAAGACTTTAATACTCTCCTAAGATGTTTCTGAACTGTCTCCCGAATTAACTTTATGGGAGTCTACAGACAGCAAGACTGGAAAATCTGATTGGCGTTTTTGTCTTTCACATTCCTTTTTAAAACTCTTTGTTCAAATGCAAATCATCTACTTAAAATACTGTTCTTAAACTGAAGCCTAGAAGTCAGAAGCCACTTAAGATGGGACGCTACATCTCACACTGCTGTTCAGACCTGGCAGTAAATTTTTTAAAAATTTTAAACCATGCCCTAGACTCCAGGAGTATTGAGCGATGCTCAGAGATCTGGGTGCTGGTTGCAGGGGGGAGGGGGGAAGCTTTGCGGGAGGGGGGAGCAGGGGCTGGAATTTATGGCTGTTCTGTATTTACTGTATTCACATAGTAACAAACCAGATTGTTTCAGATGCCTTGCATATTGCACGACGCCTTGTCTCAGAGCCCGATCAGATTGTCAGGAACTCAGATGTCTTAAGGGGAGAACTCGGCCATCCTTGACCATGTGTATATAGTCAGTGAATCAGACGTGAAGCGTTCAGAGGTGTCGTTGAATCTTTGAAATATTGTAAAGTGTTTCTGTTGCTGTGATGGGGATTTGCGGTTTCTGTACCCACTGCTGTTTTCAGAATCTGTCTGTAGTTTTATACAGGTGCTGACCCATACTGTGAGGTATGTGCTGTGCACATCGAAATACAGAATAAATGGAAAACGTTCACCACATATAAAGAGTCCCATTGGCCTTGATGAATGTAACTGGGGAAGGTATTGCAAACGATTAAAACCTGCCTTGAAATGCCA EMBV3_22727 CTTGTTCGCACGTTGTTTAGGGTGCCCTTACTTCAGCAAAGAAGAAGGAGTAGGAGAGCC Gene GeneID:507149|CDK8:XM_002691842:112_cdna UTR3_Alt 3 NULL GeneID:507149 12 GENE CDK8 NULL cyclin-dependent kinase 8 EMBV3_16913 ACCTGGCTCTGTTTCCTCATCGTTCGGGGACCACACCATGAAACATGTAGGATCTCACCT Gene BVV0102_075326 + 0 NULL GK000029.2:51189837-51216520 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43654 GCAGCAAATGGCCAAAAGGTAGACAGCAGGAAGGAGCCAGAGAACTAGAATGACTGTGAA Gene GeneID:100138313|FPGT:XM_002686330:117_cdna UTR3_Alt 1 NULL GeneID:100138313 3 GENE FPGT NULL fucose-1-phosphate guanylyltransferase EMBV3_14389 CAGTTTTGTAAATACAGGACTGGCTATTTCTCTAGACTCTTGATCACTTGAAGGATAGGG Gene GeneID:507051|CSTF1:NM_001077865:910_cdna Constitutive 2 NULL GeneID:507051 13 GENE CSTF1 MGC142355 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa EMBV3_35227 GCAGCATCCTGGGCAGCTAATGCTCTCTCATGGTGACAAGCTCAATGTTAAGTTGGTTAG Gene BVT0102_103185 + 0 NULL GK000020.2:10487641-11329103 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114520 TCONS_00114521 TCONS_00114519 TCONS_00114522 1 XLOC_069306 Coding TCONS_00114519 XLOC_069306 Coding Coding PIK3R1 20:11324366-11421044 j TSS85405 6630 1 TCONS_00114519_2 549 0.00769230769230769 15 0.931576279776989 7.20493427949017e-10 1.5145277765418e-07 1.28889320591811e-13 1.89646317668434e-55 3.77869968367566e-11 7.09631605129505e-64 1.11741587116036e-09 1.05912589975917e-101 1.48538888232163e-26 2.14781253732521e-08 8.35029218180291e-12 1.38321442391865e-05 1.14864590547425e-45 0.000156136457756036 1.5792107607794e-74 0.00150809409241136 2.35180197959147e-32 0.000578652549960979 1.75147491550888e-13 3.67515682095642e-17 1.72240399910683e-75 0.000936050650353664 0.000629576971363128 0.00168737782320816 8.03238448395256e-15 2.98805879245201e-18 1.57408356693452e-16 9.93938592786777e-19 6.96396690755294e-08 0.000352730211804148 XM_005221436.1 PIK3R1 PREDICTED: Bos taurus phosphoinositide-3-kinase, regulatory subunit 1 (alpha) (PIK3R1), transcript variant X1, mRNA. 0.0 1.050e+04 100.00 0.878129713423831 XM_005248542.1 PIK3R1 PREDICTED: Homo sapiens phosphoinositide-3-kinase, regulatory subunit 1 (alpha) (PIK3R1), transcript variant X1, mRNA. 0.0 5238 80.92 0.830165912518854 TCONS_00114519_2 sp|P23727|P85A_BOVIN P85A_BOVIN Phosphatidylinositol 3-kinase regulatory subunit alpha; 0.0 1139 100.00 0.998178506375228 2 coding 0 0 0 0 -0.125003494764429 0.439768129248651 -0.0160037599626916 0.746541170289682 CTGCCGGTGCAGCCTGGGCCCAGCAGAGGAAGGAAGCCGGCCGGCGGGGGAGCTTCCACTCTCCCAGACCTTGCAGAGCAGTTCGCACCCCCTGACGTTGCTCCACCGCTTCTTATCAAGCTCGTGGAAGCCATTGAAAAGAAAGGTCTGGAATGTTCAACTCTATACAGAACACAGAGCTCCAGCAACCCAGCCGAGTTACGACAGCTTCTTGATTGTGATACCGCCTCCTTGGACTTGGAGATGTTCGATGTGCACGTTTTAGCTGACGCCTTCAAACGCTATCTCCTGGACTTACCGAATCCTGTCATTCCGGTAGCCGTTTCCAGTGAACTGATTTCTTTAGCCCCAGAAGTGCAGAGTTCTGAAGAATACATCCAGCTGTTGAAGAAACTCATTAGGTCGCCCAGCATACCTCATCAGTACTGGCTCACACTGCAGTATTTGCTAAAACATTTCTTCAAGCTCTCTCAAACGTCCAGCAAAAATCTTCTGAATGCAAGAGTACTTTCTGAACTCTTCAGCCCTCTGCTTTTCAGATTCCCAGCAGCAAGTTCTGAGAATACTGAACACCTCATAAAAATTATAGAAATCTTAATCTCCACCGAATGGAATGAACGCCAGCCTGCACCAGCACTGCCTCCCAAACCACCAAAACCCACTACTGTAGCCAACAACGGTATGAATAACAATATGTCTTTACAAGATGCTGAATGGTACTGGGGAGATATCTCGAGGGAAGAAGTGAATGAAAAACTTCGAGACACAGCTGACGGGACCTTTTTGGTACGAGACGCATCTACTAAAATGCATGGGGATTACACGCTTACACTAAGGAAAGGAGGAAATAACAAATTAATCAAAATATTTCACCGAGATGGGAAATATGGCTTCTCTGACCCATTAACCTTCAACTCTGTGGTTGAACTAATAAACCACTACCGGAATGAATCTCTAGCTCAGTATAATCCCAAACTGGATGTGAAATTACTTTATCCAGTATCCAAATACCAACAGGATCAAGTTGTCAAAGAAGATAATATTGAAGCTGTAGGGAAAAAATTACATGAATATAACACTCAATTTCAAGAAAAAAGTCGGGAATATGATAGATTATATGAAGACTATACCCGAACTTCCCAGGAAATCCAAATGAAAAGAACCGCTATTGAAGCATTTAATGAAACCATAAAAATATTTGAAGAACAGTGCCAAACCCAGGAGCGGTACAGCAAAGAATACATAGAAAAGTTCAAACGTGAAGGCAACGAGACGGAAATCCAAAGGATTATGCATAATTATGAAAAGTTAAAGTCTCGAATCAGTGAAATTGTCGACAGCAGAAGGAGATTGGAAGAGGACTTGAAGAAGCAGGCGGCTGAGTATCGTGAGATTGACAAACGCATGAACAGCATTAAACCAGACCTCATTCAGCTAAGAAAGACGAGAGACCAATACTTGATGTGGTTGACTCAGAAAGGTGTTCGGCAGAAGAAATTGAACGAGTGGCTGGGCAATGAAAACACTGAAGACCAATATTCGCTGGTAGAAGATGATGAGGATTTGCCCCACCACGATGAGAAGACTTGGAATGTTGGAAGCAGCAACCGAAACAAAGCTGAAAACCTGTTGCGAGGGAAGCGAGACGGCACTTTTCTTGTCCGGGAAAGCAGTAAACAGGGCTGCTACGCCTGCTCTGTGGTGGTGGACGGCGAGGTCAAGCACTGCGTCATCAACAAGACGGCCACGGGCTACGGCTTCGCCGAGCCCTACAACCTGTACAGCTCCCTCAAGGAGCTGGTGCTCCACTACCAGCACACCTCTCTCGTGCAGCACAACGACTCCCTCAACGTCACACTAGCCTACCCAGTGTACGCGCAGCAGAGGCGATGAAGGGCCGCCCTCCAGCCTGCTCCTTACCTTTGACTCCCCAAGGCCTCTGGCAAGCACAGGGCTCCCCTGCAGCCTGACCTGGGAACTGAGCTGCGGACACCCAGCCGCCTGTCTTCAGATGGGACTCGAGCCTTCGACCCCACGGCAGGAAGGGAAGACGCATCGCAGGGCCACGCACCGGACAGCCGCCGTTCCTCGTCTCGAGTGCTTTGTCAGCCTTTCTCTCTTCCCTCTTTCTGTTTCGGTTTTTTTTTGGTTTAATTTAAAGCCACAACCACACACAAAGAGAAAAAGAAATGCAAAAATCTCTGCGTGCAGGGACAAAGAGGCCTTTAACCATGGTGCTTGTTCGTGCTTTCAGAAGCTTTACCAGCTCAAGAGTTGGGACCTTGGAGACCGGAGCGGGGACGGGCTGACGAGCCCTAGCCTGGGGTCGCTCGGTCCAGCCTGGGTGTTGCCGTGCACGGTGGCCCCCAGACGCACTGCACTGTGGATTATTTCATTTTCTAACAAAATGAACCGATATGTAGCAGAAAGGCACTTCCGCTCGCAGGGAACACTTGAGGGAACATCTGCTCCGTGTGTTCAGAGGAAGTTCTGTTGTAGCAGAGTGCCAGAAAGTGTTTTGTTGAAATTCTTAAACCAAGAAGACCCACCAACAGAAAAATGGAGCTTTGAAAACGGGACTTCAAAATGACATTTAGTATATAAAATATGTACATACCATTGGATGACTAACTATCAAATAGATGGATTTGTATCAATACCAAATAGCTTCTGTTTTGTTGTGCTGAAGGCTAAATTCACAGTGCTATGCAATTCTTAATTTTCACTGTTGTTATCTGTTTTAAATGTACCTTCAGAATAAGCTTCCCCTGCCCCAGTTTTTGTTGCTTGAAAATACTGTCCCTGATTTTTTTTTTGTTAATATTCATTTTGTTACTCATTTCCTTTTTTTTTTTAAGAAATGTACAGGATGCCAGTTTAAAAAAAAATGGCTTCAGAATTAAAACTATGAAATATTTTACAGTCTTTCTTGTACAGAGTACTTGGCTGTTAGCCCAAGGTTAAAAAGTTCATAACAGATTTTTTTTTTTGGACTAAATGTTTTGTTGGGCAGTGCCTGATAAGCTTCAAAGCTGCTTTATTCAATTAAAAAAAAAAAAAGATATATGAATATGACAAAGTATCGCTGAGTTCAACAATGTTGTTTCAAGACTTAAGATACGGTACCTGGCAATGTTTGTTTCGTAAAGAATTGTGAACTTCTTGAATCTAGGGACGGGGATGTAGCAAAGGGTTGTACAAGTGGGGTGGGGGAGGGTTGGTGAGATGGCATGCACTTTCTCTTTCTTGTTATTACGGAGAAGTGGATCACTGCAAAGTGGAGTCTCTTCCCACTTTGATCTGCTACTTACTATGCCCTCATGACAATTACAAACCTCCTGGAACGCTAGTTCTTAGGAAGGCAGGCAGGGTCTTCGAGCAGTGTTCATCCTTGTTGGAAACACTGATTTCAAAATATCATTGCTGCATTTAGAAAACCTGTCTCTCTTTAACATTAGATGACCCATTACCAACCAGCCAACATCCATTTTAAGAAAAAGCATGACCTGAAAAAGATATTTTTATCCAGGTATCTGCTATTTTCCTAGCTTTCCATTCAACTTAGATCAGAGAGCCTCACATGGTCATCATCGTTCCTGCCCCGATTGTGGGGGAGCTTGTTGAAGTCATGGCCGTTGTAGGAATCATAGTAACAGTCCTCATTCACCCAAATAATTGTATGTGTTATTACTTCATTGTGGGGAAGAGGGAGGAATTGTTAGAGTATTCTTTCCAACTTACCTTAGCAAGAGCAAGAGGTGTCTATCCCCAACTTGTATGTAAAAGCCTTTCAGTTTACTGGGAACTGTACCTACACTGGAAGGAATAAAGGGGAGATTAAAATGGAATCTTACAACTTCAGTTCTTCTTGCTCAATATTAGATTCTCCACAGGTTTGTTTTTCTTTCTTTCCAACTACTGGGGTAAGGGGTTTTGTTTTGTTTTTAATGTTGTTCCTTTGAAAGGATCAATCCCGCAGCTGACTTAACTAGAATGTATTTTTTTTTTCCTTTTTACATGAAGCTACTCATATCAAGAGCAATAGTCAGTCTTACAGCCAGACAGACTGTCAGTCCTCAAACTTGACTGTACTGACCTGACCATCTCCCTTTCATCTCCAGACAATTGATGATTCCCCTAGTTTTAGTCGAGGAGTGTCTGCTTTACAACTATCCCTCCATGTCATACAGAAGCCCAACCATTAGTAAACAGTAGTTTTATCAGCTAGGTTTATTGCTTTTTTGATAGCACATCCATGTGTATTATTAACTTTCATTTAATTTCTAAACTATCTGAGATGGAGTATTTCGTGGAAAAGCTACAGTTCTGTTCACCTTTTTTGCTTCAACACTTTGCAAGATGGCATGGTATTAGGCACTTGCCTCATTTCTACATCTCATGAGCATAAATGCAGTAGATTTTTCTTTGAACAGCAAAGGCAGAATTCATGATTTCCTATCACAGTGAGTCACACCTTACGTAGGATGCTATGCCTCTGCCCGACGCCTTATTGATAGTGTATAGCATCCCATCACATCTGTCTTTGTAGATGTTTGACCAGCAGGGTTCTTGGAGTCCAACCATTCATCTTACAGCACTGAGTGGCTTGTGAGTATAAATGGAGACAGCAGAGGCATTCCTGATACATGCTTACATCCATGTGTGGATTTTCCCCACCCGGTATAGCATCCTGAAGGTAAAAGCCAGAAGCTAAGCTGCAGAGAGGCTATGATGGGGCTGTAGAAGTGGGAGCGCTGCGATCTGAAATCACCCACGAGAAAAAAACCACAACCATGAGGAAAAGGCAGAAAGCTTGTTTTTGCAACTTCTGACAACTTCACGGCCCTTGATATATGTATATATGTATATGTGCATGGACTGTTTCCAGTACACCTTTCAGCCAAAACAGATCCACAGTCGTTGAGTTCAAGTACATAACGAGACAATGTCTAGTACAATTCTTGTATATGTGTATGGGGTTTTTTTCTTTGAAGTTGTTTTGTTTTGTCTTAACAAAGGTGAAAATTGTTTGCAAGTGGAGTGAGAAGTTCATAATTCTTTGGCTTTTTTCTGTTGTTTAAAAGTTACTCCTTTGGGGTAGCTGGTCTCCGTGGCTCACTGAACTTGGAAACCCACGTTTTCGGTGTGTTCAGTCAAATGTGTTGATGTGAGCTGTCACTGCGGAACCAACTGCTTTGTCATATAGCTGGTTATGAACTAGTAACGTGTTTGGGAAGTCCTACTGATGTTCCTTTTTGGGAGAAAAATTCTGCTGGTTCTAACAACTGTGCTTCTGCTATGCATGGTATCCAAGTCAGTTGGAAAGCAGACCCTGAAATTTGAGTTTAGGGTCATTTAAGAAAGGGGCAGTTTATAGCACAATGCCTCACATGAGACAAAGTTCTGAAATGCCAAATTCTTATTTTTTAGAAATCTAGTTAAATTACCAGTATAAATGACTAGTATGAACAGAATTGGGTTCATTGGAAACACTAACCAACTTAACATTGAGCTTGTCACCATGAGAGAGCATTAGCTGCCCAGGATGCTGCTATTAAAAAAAAAAAAAAGGCAAAACAAAAATAGCTCATTTATATGTGTGTATTTTTTAAAGCTACGATCTGTTCGATGTTTTTACAAATCTGTTTCTATGATATTGTTAAAATAAAGTTGGTCTTTTGACGAGAGGGAGGTTGTCATGGTCAGCTGTAATTTTGCCTTTACAAGGCACCTGGGGCGGGGGGCGGGGGGACTGTGCCTCCTTGACATTTGTTCAAGCTATAGGTTCAATGGAGCTATGTCTTGTTGTTTTAAGTTGCTTTAATGCATTGTATTAGGTCTTCAAACAGAATAAAGGTTGTTTTGAAACTGAAGTCATGGTTTGAAATTTCAGCAATCACCAAAGAAATTTTTAAACACTCTTCCTCTTTATGTTAATGTTGCATCTCCTTCTGTAGTCCCCCACCCACCCCATCACTGTCATTATCTCGTTTTTGTCCAGTGAGAAAAACAGGAGTGGTCACGTGAATGATGGGGCAGTGTCATTTACATCATTTCACTATATGCTTAATGGTGGAAAGAAATAGCTCTAGGTAATATCATGTGTAAGAAAACGTAATCACTGTCAGTCCCTCCCATTCACTGTCCATCTCCAAAGCTGCAGAATCGTTCTCTAAAAACTGGTCGGTGAAAGTAACCTTTGTCCCTCTGTTCTCTGGGCTGCATATATGGGCCAGCCACAGCACAGGGGTCCTGAGAGGCACTGTGCGGCATGCAAAGGTGACATGGACCTCCAGACAGGAAACGAAGATTCACTCTAGATTCTGCTTTCACATTATAGCATCTAGTCAATATATGTAAACCATTCTTAATCTAAAATGACTTTCCCACTTGTTTTGATTGCTGACTGAATTTATAATGAGGTCACTTTGCATGCACCTGGCACTCAACACCTAAGCACAGTGAGGGTCCCAGACATGAAGGCATGGTCTGGTGATGAGATGGGCACACAGTAATTACAGTCATGGCAACAATGACTAATACACCAAGTATGGCAGTACCGCTCGGATTCATTTCCTGCTCTTTCCCTGCTCTGTTCTGTATTAGAGAGAACTCTATACTCAGAATCTC EMBV3_43783 CGAACGCTGTGCCCTCGAGACCTCGCCCTTCCTCGTCAGGACAGAGCAGTACATTCGTTT Gene BVT0102_424642 + 1 EMBV3_18457 GK000001.2:138676650-139155489 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005435 TCONS_00005436 TCONS_00005434 1 XLOC_001257 NonCoding TCONS_00005435 XLOC_001257 NonCoding NonCoding - 1:138679880-138681050 - TSS2690 942 1 TCONS_00005435_1 41 0.435244161358811 2 0.195893926432849 3.78136283056005e-11 5.50564802044792e-11 2.89895190601356e-08 0.000220384235962986 7.12064109759187e-10 7.59401298863599e-06 3.92192966550167e-05 0 0 0.00062773327512473 4.85982592370756e-06 0 4.12093421641179e-10 0.000354544509996842 0 0 0 0 0.000270755106896611 0.000841217972110654 0.000755000231468179 0 0 0 7.69935630798308e-09 0.000107644539159974 3.5507436658109e-10 0 5.15263178077126e-06 0 XM_002704654.3 LOC100335451 PREDICTED: Bos taurus collagen alpha-1(XVII) chain-like (LOC100335451), transcript variant X1, mRNA. 3e-38 163 71.52 0.332271762208068 0 noncoding 1 1 1 1 -0.0774227327970909 0.482175558018292 0.017152988626032 0.796913104112341 GAGGGGATGCGGCCAATAGCTGGTCATCAGGTGGACAGTGAGTGAGAGGCAGCTTCAGGCCTCCTCCCGGAAGCCCTCCGGCTCACCTCAACTTGGGCCAGCGGCGCTGGGGGCCCAGCCAGGACCGGGCCCCTGGAGGGCGAACGCTGTGCCCTCGAGACCTCGCCCTTCCTCGTCAGGACAGAGCAGTACATTCGTTTGGTAAAGACTTACAGGGCCATTGTTACCTGACCACGACCTGACTTCAAGAAGAAAGGCTCTGACACCAAGACGTTTGCAACAACTGAGTCCCTCCCTCACTTTTGCTTTAAACGGGCTTTGCTGAAAGCTTTCGGTAACTTTGGGGTTCTTTAGGCGTGAGCATGACCTTGGAATCAACCTTTCTCCGTTCCAGACGCCAGTGTTTCAGTATTGTTTGGCCTCACTGTGCAACACCCAGAAATACATTATTCAAACAGAAATTTGAGAACTCCCGATACAGGTGTTAACCAAGCCTCTCTATTATACAATTATGGACCCAAGGCTGTCCTTAATGAAATCTAGGTGCTGGCCCACTTGTGTATAAATTAGCTAGGACTCAATCTTGTACTACTATAGACTCTAGACAAGTATTTCCCAATCTTTAATGCATGTAAGTCACCACGGAGTTTGCTAAATGGCTGATTCCCAGACCCCATTCAAAGGGACTGGGTTGAAGCCAGATTTTCCTGGCATTTCAAACAACTACCTCATGTGATCCTGATGTAGGTATTCTGCTCGATTCCCACCTCCTAAAGAACCCTCTGGAAAACAATATTCCTGTGAGATAGTTGAGCAACCTCTGAAAGAACACTTTATTTCCGATTTTTATCGCCTCTTATACAATAAACTCCATTTGTAAGTAACTTAAATTGCCAGAAATGTCTTCTTACATTGTCTCAAAATAAAGTCTAATATAATCTG TCONS_00002345 TCONS_00002346 TCONS_00002352 r 3' 3232 TCONS_00002345 TCONS_00002346 TCONS_00002352 r 3' 4055 EMBV3_03917 ACAGCTCAAATGCCCACAAAGTAAGGATTGATCTACTAAATCACAGTACATTAACACAAC Gene GeneID:539791|TLR10:NM_001076918:35_cdna Constitutive 0 NULL GeneID:539791 6 GENE TLR10 MGC140623 Toll-like receptor 10 EMBV3_37344 GCAGGGTGTGGTAGCTGTTTCTTTTGTGCCATTTTGGGGTGGAGAAGTTGTGATGAAGCC Gene GeneID:282119|VDAC1:NM_174485:2_cdna Constitutive 0 NULL GeneID:282119 7 GENE VDAC1 NULL voltage-dependent anion channel 1 EMBV3_14819 ACTGGCGTCCACACCACGCAGGAAGTAGACAGTATGAGCCTGACCAGTGGAGAAGATATT Gene GeneID:524306|FAM120B:NM_001102507:11_cdna UTR3_Alt 2 NULL GeneID:524306 9 GENE FAM120B CCPG MGC143258 family with sequence similarity 120B EMBV3_37223 TTTAAATCTTTCCCCAAGGCCACTTTCCCGGTGAGACCCCACAGTGACCACCCTAGTACA Gene BVV0102_155012 + 0 NULL GK000023.2:27846505-27862915 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32913 CTCCGCCGTCTCCACCGACGACTCGGAGCAAGAAGTGGACGTCGAGGGCATGGAGTTTGG Gene GeneID:541116|MXD4:NM_001076256:31_cdna Constitutive 0 NULL GeneID:541116 6 GENE MXD4 NULL MAX dimerization protein 4 EMBV3_34519 AGCCGCACCACCCTGCAGGTCTTCGTCCAGGAGCCATTGTGGCCGTGTATGTCGTCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29832 GTCCCGCATTCACTCCAATCCAGCCCAAGAAGAAAGGGACCTACAACCCCAGAATTGTGA Gene GeneID:517009|LOC517009:XM_002692453:484_cdna Constitutive 0 NULL GeneID:517009 13 GENE LOC517009 NULL similar to Uncharacterized protein C20orf152 EMBV3_08055 AGTACCCCGACTTCTTTGCTCGCGTCTCCCTCTATGTGGACTGGATCAACTCCGTGCTGA Gene GeneID:100298591|LOC100298591:XM_002689143:131_cdna Constitutive 0 NULL GeneID:100298591 7 GENE LOC100298591 NULL similar to elastase 2, neutrophil preproprotein EMBV3_14408 TCACCTCTTGGGGTGGGTCTACTGTCTACCTCAGGGGAGGCTGTCTTTCATGTATATGGA Gene GeneID:407111|FASLG:NM_001098859:82_cdna Constitutive 0 NULL GeneID:407111 16 GENE FASLG NULL Fas ligand EMBV3_22130 ATTGTCTGGCGCGGCTGAAGCGGAGGCAGTTCTGGTGGATGTGAACGTGTATCTGATCAT Gene GeneID:539540|PCDHA4:XM_002689222:68_cdna Constitutive 0 NULL GeneID:539540 7 GENE PCDHA4 NULL protocadherin alpha 4 EMBV3_19398 CAATCAGTGGAAGGTCGGCGAAAGGCATTTGGAACATGTGGCTCCCATTTGATAGTGGTG Gene GeneID:783002|LOC783002:XM_002697459:77_cdna Constitutive 0 NULL GeneID:783002 23 GENE LOC783002 NULL similar to olfactory receptor 1359 EMBV3_29204 TAGCCCAAAGGTGGCCCATAGCAGGGATGCTCCCATAGACAGTGGACAGCACTGGAGTCT Gene BVV0101_038547 - 1 EMBV3_03619 GK000013.2:52593106-52600913 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07518 GGCGCAGTGGACAGGCGAAGGAAAGCGCGGGGGATGAAAGAACAGAAACTTGAAGCCAAA Variant GeneID:616485|LOC616485:XM_002685306:135_cdna 380^606 1 EMBV3_04550 GeneID:616485 2 GENE LOC616485 NULL similar to LOC129881 protein EMBV3_21541 TTCTTTCAGCTGGACCCTCAATCCTACCTGCTCACCGTGCATTCACCAAAGCCTGCCCCA Gene BVT0102_022149 + 0 NULL GK000026.2:51357472-51450394 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30376 CCAGGAATATAGTTCTTACATCCCACACCCTTTTTCTACATTGAGGCCCCTGGGTATCAG Gene GeneID:767984|PLIN3:NM_001077046:72_cdna Constitutive 0 NULL GeneID:767984 7 GENE PLIN3 M6PRBP1 MGC128897 perilipin 3 EMBV3_11236 GTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACT Gene BVT0102_034079 - 0 NULL GK000010.2:49904537-50126012 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012044 TCONS_00238284 TCONS_00220551 TCONS_00142472 TCONS_00222180 TCONS_00056187 TCONS_00162569 7 XLOC_007594 XLOC_144951 XLOC_133868 XLOC_086897 XLOC_135489 XLOC_033990 XLOC_099450 NonCoding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_15495 AAGCTGTCCAAGAATCAAGCATTAATGGACTGAAACAGACTATAGTTCTATGGGTCCCAG Gene BVV0102_109084 + 0 NULL GK000011.2:56969286-57156068 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27477 TCCAGGCTTCTACAGTTGTCACTTATGTGTATCAGCTAATTGGAGATGATGTGAAAGTAG Gene GeneID:513840|VPS29:NM_001034455:150_cdna Constitutive 1 NULL GeneID:513840 17 GENE VPS29 MGC127483 vacuolar protein sorting 29 homolog (S. cerevisiae) EMBV3_03669 TGAGAAGCGGCTCAGTAAGGTGGAGACCCTGCGCGCCGCCATCCGCTACATCAAGCACCT Gene GeneID:100337220|LOC100337220:XM_002694243:201_cdna Constitutive 0 NULL GeneID:100337220 16 GENE LOC100337220 NULL class II basic helix-loop-helix protein-like EMBV3_29576 ACAATGTGTAAATCACTGTGGCTGTATAGCCACAGTGATTCAGTTATACACATATATACA Gene BVV0102_238123 + 0 NULL GK000003.2:55210381-55231809 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17216 CCTGGAAGATGCGCTCCTTTTTGTTACTGAATGTTGGGAGTAGCTGCCGATCTGTGGTTG Gene GeneID:282078|SEC11A:NM_174465:74_cdna Constitutive 1 NULL GeneID:282078 21 GENE SEC11A SPC18 SEC11 homolog A (S. cerevisiae) EMBV3_26359 TGCAGGAGTGTCTGGAGCACGGCCGAATAGCCAAGTTCAGCAAAGTGAGGACCATTACTA Gene GeneID:359716|DNMT3A:XM_002691463:317_cdna UTR3_Alt 2 NULL GeneID:359716 11 GENE DNMT3A NULL DNA (cytosine-5-)-methyltransferase 3 alpha EMBV3_27056 CTACGTCTCCTCCTTTGTCCCTGCGTGCTCCCTGCCCTCTTTCACCCGGAGCACGCCCTT Variant GeneID:507692|C18H19ORF63:NM_001080239:148_cdna 457^860 1 EMBV3_12473 GeneID:507692 18 GENE C18H19ORF63 MGC154997 chromosome 19 open reading frame 63 ortholog EMBV3_14263 GCGGCAAGACTGTTTGGCCGCCTCTACAAGGAGATCGAAGTTGGCGGTGGCCGGAAAGCT Variant GeneID:505507|RPS7:NM_001098874:5_cdna 58^213 1 EMBV3_25230 GeneID:505507 8 GENE RPS7 MGC165697 ribosomal protein S7 EMBV3_30774 ACCTTGTGCCTCGCAAGCCCCCCTTCCCGGGGGATGTTCCACCTGGAATTAGAAATATTA Variant GeneID:783025|SPAG11B:NM_001098154:8_cdna 203^492 2 EMBV3_02770 GeneID:783025 27 GENE SPAG11B NULL sperm associated antigen 11B EMBV3_10651 TACAGTCTGTACATATGTCCTGAAAATGTTTTAATTCCTTTGGCATGGTTGCCATGTTGG Gene GeneID:100299693|LOC100299693:XM_002686159:299_cdna Constitutive 2 NULL GeneID:100299693 3 GENE LOC100299693 NULL hypothetical protein LOC100299693 EMBV3_20816 ATTGTTTGCTTTAGATTTTTGAAACGGCCCTGGCGACGCCCTTATTGGCTCTCGCGCTTG Gene GeneID:511901|LOC511901:XM_002697143:64_cdna Constitutive 0 NULL GeneID:511901 22 GENE LOC511901 NULL similar to H1 histone family, member X EMBV3_10932 GCCAGTAGCGAGGGGCAGTTTGTTGTCCTTAGCAGTAGCCAGTCAGAAGAGAGTGATTTG Gene GeneID:517850|APPL1:NM_001099003:187_cdna Constitutive 0 NULL GeneID:517850 22 GENE APPL1 MGC139608 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 EMBV3_38363 ATACCAACTACCATGCGGCGCTGTGCTGCGAGAGCCTGAAGCTGGCTGTCATCAAGAACT Gene GeneID:514589|PANK4:NM_001083429:118_cdna Constitutive 0 NULL GeneID:514589 16 GENE PANK4 MGC142618 pantothenate kinase 4 EMBV3_09463 GGATGCCTCCGGGCCCCACGACTCCTCTGGGTGCCACGTACTGGGGCCTCTTCCACAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35117 CTCTGGCAGGAGATTAGGATTCAGGGTGTTGATCGAAGGGGGCTTTTAGCTTTACTTGTA Gene GeneID:786874|ZNF568:XM_002694954:89_cdna UTR3_Alt 2 NULL GeneID:786874 18 GENE ZNF568 ZNF793 zinc finger protein 568 EMBV3_30456 CATCTCTCCGCCTCTTGCACTGTTGTCTTGTTTCACTGATCTTAGCTTTAAACACAAGAG Gene GeneID:536149|AGFG1:NM_001038171:136_cdna Constitutive 0 NULL GeneID:536149 2 GENE AGFG1 HRB MGC128795 ArfGAP with FG repeats 1 EMBV3_38484 CAGGTCATCGGAGAGATCAGATTATAGAGAAAGATGCTGCCTTGTGTGTCCTGATTGACG Gene GeneID:509729|MED7:NM_001079583:5_cdna Constitutive 0 NULL GeneID:509729 7 GENE MED7 CRSP9 cofactor required for Sp1 transcriptional activation, subunit 9, 33kDa EMBV3_33615 GCAACGAAACTGAGGCACGGCCACTGGGATACTACATAGTGAGAACTGAGGCTAGACAAC Gene BVV0102_315940 + 0 NULL GK000018.2:56084734-56090691 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27655 TTTTGAAAAAAAATCAAAAGCAGTAACTATTTTATATGGAAATGTGTCTTGAAATATTAC Gene GeneID:536337|PTPRR:NM_001015662:15_cdna Constitutive 0 NULL GeneID:536337 5 GENE PTPRR PCPTP1 protein tyrosine phosphatase, receptor type, R EMBV3_09087 CCAAGACGCGGAACAGTAATAACAATAACACGGCTGGAGACCTCAGTTCAGGGAGGGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12726 CCTGCAATGTGCTCTATGCCTTTGATGTCAGCCGACTGTTTTTCCAATGACATCCACAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32858 TTTGCTTCCCATGATTCTACTGTCGGTGATCTATGCCCAGTCAGGAGCCTGCCTATATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00335 CTAACCACTGGACCACCAAGGAAGCCCCAATGGACACGACGATTTCCCAGACAAGGTAAT Gene BVV0102_440847 + 1 EMBV3_00680 GK000028.2:46079447-46147259 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33353 TTGCTAAAAAAGCAGCGGATGCTGAACCGGTCCTGAAAGCTCACCAGTCTCACTCTGCAG Gene GeneID:506848|SIKE1:NM_001075281:29_cdna UTR3_Alt 3 NULL GeneID:506848 3 GENE SIKE1 MGC142423 SIKE suppressor of IKBKE 1 EMBV3_34844 TGAACAACGTGGAGGCTGCTGTCGTGCTGCTGAAGAACGGGGCCAACAAGGACATGCAGA Gene GeneID:767866|NOTCH1:XM_002691620:285_cdna UTR3_Alt 2 NULL GeneID:767866 11 GENE NOTCH1 NULL Notch homolog 1, translocation-associated (Drosophila) EMBV3_35597 CCATCATGAGTGACAGAGTGTGCAACTTACTGGTCTTTGCGTCATGGTTGGCTGGTTTCA Gene GeneID:788372|LOC788372:XM_002687620:748_cdna Constitutive 0 NULL GeneID:788372 5 GENE LOC788372 NULL similar to Olfactory receptor 6C74 EMBV3_03699 ATTGCAGTTGCCTGGGTCATTGCGAGAAAGCCACTGGGCTTGCCTCTTCCTCTGTATAAA Gene GeneID:538843|KIRREL2:XM_002694941:52_cdna Constitutive 0 NULL GeneID:538843 18 GENE KIRREL2 NULL kin of IRRE like 2 (Drosophila) EMBV3_43334 TGTAAGTGTACAGACCCCAAGTTCCAAGGGCCAACCTGTGAGATGTGTCAGACCTGCCTT Gene GeneID:281876|ITGB1:NM_174368:55_cdna Constitutive 0 NULL GeneID:281876 13 GENE ITGB1 MGC137337 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) EMBV3_41957 ACAGACAGTTCCAGGTCACCAGCAGGCTTCTATAACCACCATCCACCACACATTCCTGCA Gene GeneID:100295505|ZNF804B:XM_002686877:15_cdna Constitutive 0 NULL GeneID:100295505 4 GENE ZNF804B NULL zinc finger protein 804B EMBV3_32278 CCAGGCTTCCCTGTGCCCACTGTTCTGGATGGAGTTCAAAGGCCACTGCTACAGATTTTT Gene GeneID:100139157|LOC100139157:XM_002698014:159_cdna Constitutive 0 NULL GeneID:100139157 25 GENE LOC100139157 NULL similar to hCG1657150 EMBV3_23982 AAGAGAAAAAATGAGGACATATCAGTATCGGGTTCTCGGTGCTCTTCTGATGCCAATATG Variant GeneID:523042|FNIP1:XM_002688971:137_cdna 688^822 1 EMBV3_02412 GeneID:523042 7 GENE FNIP1 NULL folliculin interacting protein 1 EMBV3_00583 GGCTTTGTCTCCAGGCAGAGATTCCCTCTGTCAGCATCCATCACCTGTACTCATATAGTC Gene BVT0102_095923 + 0 NULL GK000018.2:53167521-53169568 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084019 TCONS_00086833 TCONS_00086832 TCONS_00084022 TCONS_00084020 TCONS_00084018 2 XLOC_051430 XLOC_052258 Coding TCONS_00086833 XLOC_052258 NonCoding NonCoding - 18:53167720-53169256 - TSS64547 1416 2 TCONS_00086833_4 101 0.0755649717514124 2 0.0788273615635179 0.0036972950701208 0.00219868050973226 0.00221685616149366 0.00182489095404037 0.00139888238223793 0.0014937676274404 0.00159459451615862 0.00173865323464943 0.00204957587595731 0.000209500052068241 3.27861516415132e-06 2.81295856349521e-185 0.000512298346183469 0.000872550723129262 0.000415112786280496 0.000218550385015611 0 0.000372340276541676 0.00433690961212697 0.00296661226734438 0.000874520163526438 5.8697350408633e-199 7.386814377218e-05 6.02855290480642e-05 0.00248614403139656 0.00213877219800237 0.00226741916042093 4.20035985912123e-302 3.87928375350069e-135 4.54746529989628e-285 XM_581379.6 CASP8AP2 PREDICTED: Bos taurus caspase 8 associated protein 2 (CASP8AP2), 4e-14 84.2 80.65 0.0649717514124294 NM_024707.2 GEMIN7 Homo sapiens gem (nuclear organelle) associated protein 7 (GEMIN7), 5e-07 60.8 71.32 0.0946327683615819 0 noncoding 0 0 0 0 -0.237936146740484 0.126711307795563 -0.000958696130588618 0.984510867357475 ACGCCTCCCGGCTTCAAAGTAGATAACTAACATTCAGGCCCTCACACATTCGTCACGAGCTCAGGCAACGGAGAAAGGAGTGGAGGTGATAGGAATAAAAACATATGCTTGGTGAGGCTAGGCCAACTGATATGGAGAGAAGCAAAGGGATGGAGAACTTGAAAGGCTATAGGAGTTGTGTTGACTATATGAGTACAGGTGATGGATGCTGACAGAGGGAATCTCTGCCTGGAGACAAAGCCTGTCTCCACTTGCTGGTTAGGCTCCAGCTTTCCATTTGCAGACTGCAATTTCATCAATGACCCTCTTTGGATGTTGTGGTTATAACAGACGAAAAGAAAAAGCTAGACGAAGGAAGAAATTCCGAAAGCAAGGGACGAATCTTCCAACCGAAATACCCGGCGATGGAGCAGGTAGATCACGGAGCCAGTAGCGAACTAGCACGAACTCAAGCCACGCCCCCACAAGGGCTGACTCAGTCGTTTACTATTCGCCTCCGCACTTTCTCCGCTCTATCCCAACCCAACCACAACCCTGGGTGGGCGGAGCTAAAACCAAAAAAGGTGACTTGGGGAGGAGCAAGTGACGTCGTTGCTAAGGCAACTCGAAATCTGGGCCCAGGAGTCGCCAGAGGTAGCGTTGAGAATGAACAAATGGGAGCTGAGGCCCTGCACAAGCTTCATTCAACTTCAGGGGTTGCTGCACTTTGACCACTGAAGATGACCAAAGGAAATCACATCTATATTGAACGGAATCTTCACTTACATTCTTAAACTGATGGGACTACAGAGGGGGCAGAAATTACTTTTTGAAACAATCTACTGAGGGAATTCCCTGGAGGTCCAATGGTGAGCACTCTGTGCTTCCCCTACAGGGGGCATGGGTTCAACCCCTGGTGTGAGAAGATCCCAGTGTCATGGCCAAATAAATAAAAGTAAAGTGTGTGAAATGGACAGCCAGGCTACAAAGCCGGGGTTAAACGGAGAAGGGGCAAAGTTTCACTCTAACCCTTAATCCCCCTTTTCCCCAATGGTGCTGCAGGGTTTGACCCACCTAAAGGCTACCCACCCAGAGGCCAGGCAATGGGAGGGACCTCTTGTGTGTGACCATGTGACCCAATTCAAGTCACTCCCCTCACTGTATACAAGCCAGCCCACCAGAAAAGTCCAAGTCTCCCAAGTCTGGCATCCAGCTCACACCAGCTGTTCCAGACTAGCCATGGTCCAATCCTCACATCTTTATCCCAGCTCCTCCCACTCCTTTGACATGTCTTCCCTTTCCTGACCCAGCTCCACAGGATTCAGCCTTTCAATAGCCACCCTTTCACTCCCTGAATCTGGCTCAATACCTATAGGCTACATTAAAAAGAGAAATAAAACAAGAAGCAAAGTTTCCTGAGATAATTGATTCCTTGGC TCONS_00084022 TCONS_00084022 r 5' 0 TCONS_00084022 TCONS_00084022 r 5' 0 EMBV3_34805 TGGGACTCCACAGAGGGGTGGATATCAGGAGATGTTTCAGGCAAGTGTTCAGTGTGGTTG Gene BVT0102_187996 + 0 NULL GK000022.2:16361140-16367995 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128076 TCONS_00128077 TCONS_00128073 TCONS_00128078 TCONS_00128074 TCONS_00128075 1 XLOC_077820 Coding TCONS_00128078 XLOC_077820 Coding Coding ZNF445 22:16363542-16411608 j TSS95661 7726 1 TCONS_00128078_8 1027 0.195702821641211 7 0.839404972433163 0.000444741105712998 2.95081237497671e-06 0.000963414497466996 0.000721948952460168 8.91138264506499e-07 4.79636765937319e-05 0.000376401884784617 0.000337697042382245 0.000487183746974818 2.99785673154931e-07 1.89865530956825e-05 4.97353197166895e-05 0.000163962096199601 0.000186619749680225 0.000133353272168072 0.00179882576668491 0.000444761252936498 0.000873739445538518 0.000650400389836483 0.000795930894968223 0.000173035406795156 0.00081863123303169 0.000658736704798351 0.000649953407030294 7.03654611207018e-05 0.000657775645662179 4.927812586763e-16 0.000187773220358991 0.00013845580039942 0.0001743820647853 XM_005222534.1 ZNF445 PREDICTED: Bos taurus zinc finger protein 445 (ZNF445), transcript 0.0 1.213e+04 100.00 0.870566916903961 NM_181489.5 ZNF445 Homo sapiens zinc finger protein 445 (ZNF445), mRNA. 0.0 3663 78.63 0.568211234791613 TCONS_00128078_8 sp|P59923|ZN445_HUMAN ZN445_HUMAN Zinc finger protein 445; 0.0 1623 76.96 0.999026290165531 7 coding 1 1 1 1 0.0199579663436737 0.870388879299809 0.0124424078065579 0.875957150500713 GGGTCGAGCAGTCAGGGCACTGAGAGTTCTGCGGCCTCTGGAGTTGTCTCTCGCCAGTGACTTCTGATGTCCCAGCAAATGGCGTTGTCCCCAGCGGTGCTGAAAAGATACTCCTAAGGGCCCAGCAGTGATAGCCACAACTAATGCAGACTTGGTAGCACTCTGCTGGGAAGACCTTGAACAGGAGTGATGCCTCCAGGCAGGTGGTACGCTGTCCATCCAGCTCAGGCCAAAGCTTCCAGGGAGCGAGGACGCCTTCAGATGGTAAAGAAGGAAGAAGAGGATGAAAGCTACACTTCAGTGCCGGCTGCCAGACCACAGACACTCAACCGTCCTGGCCAGGAGCTGTTCCGCCAGCTCTTCAGGCAGCTTCGCTACCACGAGTCTTCTGGGCCTCTGGAGACCCTGAGCCGGCTCCGGGAGCTATGCCGCTGGTGGCTGAGGCCAGATGTTCTCTCAAAGGCCCAGATCCTCGAGCTGCTGGTGCTGGAGCAGTTTCTGAGCATCCTGCCAGAGGAGCTCCGGACCTGGGTGCAGCTGCATCACCCTGAGAGTGGTGGGGAGGCTGTGGCCTTGCTGGAAGAGCTTCAGAGGGACTTTGATGAGACACCGTGGAGGGACCCAGCCCCTGCCCAGAGCCCAGATGTGCATTGGATGGGCACAGGAGCCCTGCGAGCCGCACAGATATGGCCCCCTGCTTCACCTCTCAGGAGCGGCTCGGCTCTGGGGGACCACCTGCAGCCTCCCTATGAAATAGGAGTGCGTGACTTCCTGGCTGGGCAACCCGATCCTCCTGCTGCACAGGTGCCTGCCCTTTGCTCGAAGGAGGGATGCGCAGACAACCAGGTGACAGCCCAGCCTCAGGGGACTATGACTTTCAAGGATGTGGAGGTGACCTTCTCCCAGGATGAGTGGGGATTGCTGGACGCTTCTCAGAGGAACCTGTACAGGGATGTGATGCTAGAGAATTATGGAAACATGGCTTCTGTGGTGGGGCCATTCACCAAACCTGCTCTCATCTCCTGGCTGGAGGCAAGGGAGCCATGGGGCCTGAATGTCCAGGGAGTTCAGTTTAAGGGGAATCCAGGTGCTGCCCCTGCAGGAGATGAGCTCCATGTGAAAACAGACAAGTTCATCTTAAAACCTGAACCTTTGGAAGAAGCAGTAACCTTAGCCATGCCATCAGGATGTCATGGTGCAGCGACTGTTTCTGAGGGACCAGGGCTCAGAGAATCCATTGCACAGAAGAGTGGGTTAAAGGAACGATGTGGAAACCCCACACAAGTGAGAGTTAAGAAAGAAGAGACCAATTCCAGCCATGGGGCAGGGAAAGACTGCGAAGATTCAGGAAGAAGTAATAGTCTTCATCTAAGACATATTACGTATTTAAGAGGACCCAGAAGAAAGCAGTCCCTTAAACATGGCTATGGCAAACACTTCAGGGGAAGTTCCTACCACTATGACTATAAGGAGTATGGGAAAGGGCTCAGACGCATGATGGGTGGGTTCAGCCTACATCAGAGAATTCATGCTGGACTGAAAGGCAAGGCCAAGGATGCGCATGGGAAGGACTTCAGCCTTAGTTCCCATCACCAACACGGGCAGAATCTTCACGTGGTGGGGACGCTGTATAAGTGCAGCGACTGCGGGAGGACCTTCAGTCGTAGCTCCCACCTTGTATGTCATCAGAGACTCCACACTCAAGAGAAGCCTTTTAAATGCAGGGCATGTGGGAAAGCCTTCAGGTGGAGCTCGAACCGGGTGCGACATGAGAAAATTCACACCAGACTGAAACCGTATAAGTGCAGTTTATGTGACAAAGCCTTCCGTCGCATGTCTGTCTACCGCCTGCACCAGGAAACCCATGCTAAGCAGAAATATCTTGAATCTACTCAGGATGAAGAAGCTCTGACCTGTGTTTCAGATTTTGATCATCATTTGAGAGACCAAAGTGGGGAGAGACTCTTTGACTGCAGCCAGTGTAGGAAATCCTTCCACTGTAAATCATACATTCTTGAACATCAAAGGATTCACACCCAGGAGAAACCCTATAAATGTCCCAAATGCAGGAAAACATTTAGGTGGAGGTCCAACTTCACTCGTCACATGAGACTGCACCAGGAAGAGAAGTTCTATGACCTGGACAAATGTAGAGAAGAGTTGAGGCAGACCTCCAACTCCAGCCAGCCCCAGAGCGCCCCCACCATGGAAAAAGCTCTTGTGTGTCAGCAGTGTGGGAAAACTTTCATTAGAAAGAAGACTCTCATCAATCATCAGAGAATTCACACAGGCGAGAAACCATACCGATGCCACGAATGTGCAGAAGAGTTTCCTCACAGGTCGGCCTACATTGTTCATAAGAGGCAGCATGCCACCAAAAGAAAACCTGAGGACGCACCCTCGTTTAGTCATGATAGAGCGTTCCAAGTTCCTCAGACCAGTCCCACCACAGAGGAGCCCTACAAATGCAGCCAGTGTGGCAAAGTCTTCCGCAATCATTCGTTCCTCCTCATCCATCAGAGAGTTCACACCAGAGAGAAGCCTTATAAGTGCAAAGAGTGTGGGAAATCTTTCAGATGGAGTTCTAACCTCTCCCGACATCAGAGGACTCACTCTTTGGGAAAACTGGATGAGTACTCCGAAAGCGAAGATGCTCTAAATCTTCAGTCACAAGTCCTCACTGGTGCAAAACCTTTTCAGTGCCAAGAATGTGGGAAAAACTTTACACGTAAAAGAAGTCTTTTAGATCATGAGGGAATACACAGTGGAGAGAAGCGCTATAAATGTAACCTGTGTGGGAAATCTTATGACAGAAATTATCGCCTTGTTAATCATCAGAGAATCCACACTAAAGAGAGACCGTTTAAATGTCAGTGCTGTGGGAAAGATTTCATTGGAAAACATACCCTCTCCATTCATCAGAGAAAACACATCAGAGCAGCCCAGTCTGAAAATGGTGTGGCTGGGCTGTCTTCCTGCCAGGAGACAGGGGTAAAGTTACATGAATTAAAATCAGGTCAGGAGAATCCTCTTGAAGATGATGAGAAAACCTGTAATCAGAGATCTGAACTCCCTGGACTCCAGGACATACCCACTCGGGGAAAGTGCCACAAATGTAGCACATGTGGGAAAACTTTTAGCAAGAGCTCACAACTCATCAGCCACAAGAGATTCCATACTCGGGAGAGGCCCTTCAAATGCAGAGTGTGTGGGAAGACCTTTAGGTGGTCTTCAAACTTGGCTCGGCATATGAAAAACCATATTAGAGATTAACTTGTGGTCTAATAGTTGGGGAGAGGGGGTCCTGGTTATCCTACTGGAGAACCCCTGATGGTAGGGGATGTGGGGCAGACCTTCACAGAGTGCCCAATCCTTATTTGGAAGCTTGTGGCAGAGAATCCTGAGGATTCAAAAATGTAGGGTAGCTCCATCCTACTGCTGAAAAATGAGATGCTGGGGAAGAGCCTCAGTGCATTCCAGAAGGAGGTTTGGGCCCCTTGGAGTGGGCTTCACACTATGGCCTGGAGTTTCCCCCCAGCCAGATTTTCTTCTGTAACTCTGAAGGGAGAGACCATTGTACTTCGTGATGGTTCAACAGAATGTCCATGGCATGGTAGGCTGTGGCTGCTGGGAAGGGCCCAGTTGGAGCCTTAGTTTGCCTTTGAGTGTGACTTACAATGGTGTCTAGTCCATTTGACCTAAAAAGCACCAGCAGCAGCAAGAACTAGTGTCTCCAGATACCTCCAGGGGAGTTCCGGCTGTGCCTTCAATCTTCACAGCTGACTTTGGGTCTTTGCTGTGGGCATAACAGTTTGTCTCAGCTGCAAGTGGAGGAGAACAGGGTCCTGGGCTTGATCATCTGGAGAATGAAGCTCTCCCATCGCCAGCTCCATCCCCCAGGTCTGAATGGACAGCAGCGGTCCATCTGCTAAATAAATGCATCAGGCATCTTCCATATGCCAGGCCCTGTCGTGTGGGCCATAGACCCAGCAGGGGACTGGAGCAAAAAACTCTGCCATCTTGGATCTTTACAGACAATAAGCAAATGAGATATATATAGTATTTGGGGTGATGATATGTGTTGTGGATGGAATGAATCAGCAGAGTGAGAGGGAATGCTGGGTTGGAAGGTGGATTGGGATTTTAAATAGGCTGGTCAGGGAGGGTGTCAACTGAGGAGGTCAGATTTGAACAAGGACCCAAAGGAGATCATGGAGGAAGCCACGTAGGTCCCTTGTTCCTACTCAGGAGCCTTCACAGGAGGTAGTCTCCTTAGGGAATGGCCCGTAGGCCCCTGAACCAGAGTGAAGTGAGCCATCTGGAAGCGAGAAGCCCAGAAAGGTAGATGGCCAAGCCAGGTGAGCATCATGGGTCCTTGCTGGGCCTTGGCTTCCTCAGAGGGGAACTTTTGGACAGTTTTGAGTTGAGGATTATGGTCTGAATCTGAACCATTACAGAATGTAGTTCAGACTCAGAGTCTCACGTGTTGAGGGCCCAAGGTCATGGGAAGGGCCTCAGAGTCATCAGGTGTGTGTTCCTGGCTTGCTATATCTTTTCTTGGCAGGATGATCTTGGGTGAATCACTGAACATTGGCATCTAAAATTAGAGTGGCTGACTCTGCTACCCAGCTCTTGGGATTGGTGAAAAGGAGGCTTGACTTACTAAGATTCTGGGTTAGGAGTCTCATCTCTAGACCAGAGCTTCACTGAGCTGTAGGTCCCATGTCAGTTGACACTATAGACACAGAAATACCCCTTTTCTGTCCATCTTTTCATCCCCCTGCTCCTTGTGCCACCTGGTACTTCATAGAGTTCCTGCCCCAGTAGGGGTGTTTCTACTGCCATTTTTATAAAATGATAAATATTTATTTTTAAACATTCAAGTCAGATTTTTAAAAATGTAAAGAGTGAAGTAAAAGTCAACAGAAATCCCTCTGTACTGAGGTATAAACCTTTAATATTTTGGGATTGTACTGATGCAGTCTGAGTTTTAAAATAATCATGTAAGTAGTATATGATTATGATAGAAATATTAGTATGTACAGATTCACTAAAAGGAAAAGTCTGACTACTTGGAGCTAACTACTAAACATTTTGGCGTAATCAGTGTTGAATTTAACTTCATTAGTCTTCCCTGAACGCCCCTGGGCTGACCTGACTCGGGCTGTTCCTTTCACGTGGAGTGCCACGCTCCTGTCTGATCTGGCCCAGGTCTCCACTCTTTCAGTCCCAGCCTTCCCTGACCCTTGTCCCTCTAGGCATTCTCCTCTGGTCCCACCTCTCCTCGTGCCTGTATATTGCTCTGTTGGGTGTTGTCTGGGTTTCCAAAAGTTATTCCCATTATTGTAGCCAGACTGAGTACTCCAGAAGCCAGGTTTGGGTGTTTTTTTTCCGGGCAGAGTAGATTTTGCACAAAGTTGCCTCTTTGAAGGAATGTAGAACTGAATTCATTATTTTAGCTAAGTCAGGATTGGAACTTTTCGAAGGTGTTTGTGAGTGAAATGTTGACTGGAGACTGCCCACAAGAACGCCTGCTACTTGGGAGCCCAGCCACTGGTGTCTCCGAGCCAGAGGGGACCCAGTTGACTGCCTTGGCCATCCGTGCTCACCTCACACCTGGCCTGGCCTGGAGAACATACCCCTTCTTCCAAACCTGCCCCGCATTCTCCCACTCCCTGGGAGGAACTGAAATTAGGGCTCGTGGGAGCCAGATGGGCTGGGACTCCACAGAGGGGTGGATATCAGGAGATGTTTCAGGCAAGTGTTCAGTGTGGTTGGTCTCACCCTTGCTGACAGAACCTGTCAGTCCAGGCAGAGGTGAGTGTAGAGAAGAACGTGCAGGAAATGTAAATTGATGTGGATCATCTTATACTCATGAAGTTGGCTAATTTTTAGAAGCCCTTGTGTGGGTAAGTGTATGGTACATGGGAACTCACTGCTGTGGGAATGGAAATTGTGACAACTGCTGTGCCAAGCAATATGTAAAATCTGGTAAAATTGTGTATATTCTGCCACCCAGAATTCTACTCCTGGATAAACCCTAAAGTAACTCCATTTGAAGAAGGAGATGTGTCTATGACTGTTCATTGCAGTACTGTGTAGATAGCAAGATTAGGAGAAGCCTAAATTTCCATCAGCAGAAGAACAGGTTGTTTTTGGTAAGTGAATATGAAAGAACTAGAGTTACATCTTTCAACATAGGTGAATCAAAAATGATGCAGAGAAAGCTGGAGAAGCTGCACACCATTTATGTAAAGTTAAACATACTGTGTATCTGTGGGCACATTATTTAAACTTACTCGTGTTTCACTTGTTCTGTAAAATGAGATAGTAGTGCCAACCTCACCGGGTGATGGGGGAGGGGGACAGTTAATGAACTAATGCATGTAAACTGCTTAGAATAGTGGCGGGCATGTAAGCATTGTTGGCCTAAGGTAGCCAGTGTTACTGTTTTACACAATAATATATTTCCTGTGATTCAAGTTATATGAGATGAAGAGTGTAAAATCCTGTGTTAGAATGATGTGTGAAAGCCATGCTCTGCCTTCCTAGAGCAGGAGTTGCTGATGGAAGCAGGGAGGGTACATGGAGGTTTCAGTTGTGTTTTCTTTCTTTTAAAATGTTGATGTAGTTGGGTCCGCATGTTGATTTAATGGGATATGTGATGGGTTCTTTTCTAACTGTGTGTTTAAGATATCTCAAAATAAAAGTATTTTTAAGCATGGGCTCTGCCATTTCATGGTTTTTTAGAAATCCTGGCTCTGCCATTTATGTGGTGTTTCCTAGAGCAGGCCATCCCTTCTCTCAAGGCTTCAGGTTCCGTGCCTACAGAAATGGAGGGCAGCACAAGTGACTCCTAGTCAAGGAGTGGATCGACAGGTCTGGAACATCCCCAGCGGTAAACCAGGCAGCAGCTAGAAAGAGTGGGGATGTTCTCCATGTATTGACATGTAATCTTCAAGACCTGCAGTTTAATTTAAAAGGATGTTATACGCTGTGTCTCCTTTAATTCCTCCTTGCCTAAAAATAACAAGTGATATCAGAAGCTGTAGCCTGGGATCCTGTGGATGGAAGATGGTTCGTCATCCATTGCTCTGTTTTTGGGTAGTGAGTAGGTTTACACACCAAACACCCTTCTTTTTAAGTTAATGCTAAGCCAGCTAAGAAGAGCAAAGAGGCTGAACCTTTTATCAGCCAGGTTATAGTCAGGAGCCAGAAACCATGTCAGTTATTTTAACAAAAAATTTGCAGAGAATATTTCGCTAGATCTATCTAAGTAAAAAGGCAAAAAGAGAAAGCTAAGGTATCATGGAGGTAGTGACTGTGAGGAGCTACCACCCATGACTGGAGGAGCTGAGAGAACCTGGCCTCATTGTGGATGTTTGACCACCGATGGATTTCAAGCTCTGCCCGCATTTTGCCTTGCATCTGGACAAGCTAAAAAGAAATCCCAAGCACACCGTCTCAGCTTTCAAGATGACCAGGTTTATGCCAACCCTGACCTTTTCAGTTGTACTGGAATCCTCACCCCTAACCACAATAAAAACCAGAGCCACTCACCCCTCCTTTTTTCAAGGCAAACCACCTGACTTTGGTACCTGTCCTGCTGTCACCACAGACCCTCATTGTGTGAATAATAAACTTTCATAACCTATTGATATGTTGTGATGTCATTAGTTTCAACATCTGAACCAGTTTTAGATGGTGGTATTGTATTGATTCCACC EMBV3_27499 GGGATGGGTATTTCGGGAGGCTTCTGGGGTTTCATAAAGGGTGTCAAGTTCCCTTTCTAC Gene BVT0102_110924 - 1 EMBV3_38211 GK000003.2:118690528-118770319 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30511 CTTCAGGCAGTGGCTTCTTGATGACAATGGTGGTGATGAGGTTGGTGGCAGCAGTGGTGT Gene GeneID:515697|LOC515697:NM_001102030:1_cdna Constitutive 0 NULL GeneID:515697 5 GENE LOC515697 MGC152498 apolipoprotein L, 3-like EMBV3_28895 TCTAGTTGTGGTGTGCTGGCTTCTCATCTTGGCGGCTTCTCTTGTTGTGGAACAGAGGCT Gene BVT0102_048746 - 1 EMBV3_11866 GK000025.2:27181609-27214941 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144943 1 XLOC_088695 NonCoding TCONS_00144943 XLOC_088695 NonCoding NonCoding - 25:27182267-27188062 - TSS108722 4342 3 TCONS_00144943_8 94 0.301243666513128 2 0.250949257852951 5.01360994068718e-05 4.39705842376721e-05 0.00013640155210954 7.65006985121299e-06 0.000131900717683418 0 9.40164688492917e-06 1.36221089544606e-06 7.4503814640949e-05 0 6.85386003119255e-06 0 1.98246151088049e-06 4.98349949914434e-05 0.000214123559667645 4.8662560600557e-05 0 0.000161802116807784 0.000100743188967482 0.00015071867673659 5.2436549669813e-06 0 2.112862883773e-06 3.86102926727364e-06 0.000273660097098481 0.000103848392720649 2.42894517673123e-05 0 0 0.000405709091344001 XR_138726.2 LOC100847934 PREDICTED: Bos taurus uncharacterized LOC100847934 (LOC100847934), 4e-52 212 77.05 0.0663288807001382 0 noncoding 0 0 0 0 -0.332836955164558 0.110874903836632 0.00688707792516657 0.889217706684363 GGGAAACTAGGAAGTGTCCTCATCACGGAACATGTTGCTGTTTTGTAGAGAGAGGCCAGGGGTATTTCTCTGAGAAGATGAGCTTTTATGTAAAAAACGGACAGGAAGCAGGTGTGTGAAACTGCCTGCCTTCTGCTCCCTCCAAAAACTCCAGAAAGAAGACAATCTAGACTGAGGAAATGGACTCGGGTGCTATTTGCTAATTCTTCAAGCATTCCAGGAGGGGAGAAAAAACAACTTTCAGGAGGGGTGAAGTTGATTTTTTTTTTTTTTTTAATATTTATTTGACTGTGCTGGGTCTTAGTTGTGGCATGTGGGATCTAATTCCCTGACTAGGGATTGAACCCCGGGCCCCTGCGTTGGGAGTGTGGAGTCTTAGCCAGTGGACCACCAGGGAAGTCCCAAAGTTGATTCTTTTCCTTCTTAACCTTCCCTTGTTCTTTCTGATTTTGCTGTAGATCATTTCTCACTTCAATCTCCTCCAAGATTCACCTCTATTCTGCCTTGTCTGTCCTTCCCTTGTCTGGCTAACTCCCTCTACAGTGGCCATGAAATGAGGTGGTAGAGGCAGTGGGTGAGCAAGCGGTCAGGGGAACTAGCCTGCTTCCTTCCGTGATAGGGAGCCACGCAGAGTGTGAAGGGGAGGTGGGGGCAGGAGGTGGGCAACCCTGGAAGTGATACACTTGGAGATTCAGGAAACATCTGCAGGGCAGATGGCCTGGGACAGTGGCCCAGATCCCCTGAGTGAGAGGATTAAACACACAGAACCTAGAGAAGAAGCAAAGGCACATGTTGCTTTGTTTTGGTTTTTTTCTTGGTATGTCTCTTCTGATAGCTGAATTGAGATAGAATTCACATACTGTATATTTCACTTACTGAAAGTGGACCATTCTGTGATTTTTAGTCCAAAACAAAGTTGAGCAACCATCACCTTAGGTTTAGAATATTTTCATCACTCCTCAAATCAACTTCATATCTATTAGGAGTCACTTCTTGAGGCCCCGCTAAATCTCTCGCCCTGCCCTTTCACTCCCAACCCCTCACACCCCGACCCCCTCCACTCTAAGCACTCACTAATGTACTTTCTGTCTCTGTAGGTTTACATTGTCTGGACATTTTGTGTAAATGGCCCACTTTGGTTTTGGTTTTAGTTGGCTTTTTTTTTCCACCTTTTTTTAAATTGGAAGGTGGGTGGGTGACCACTGAAGAGTCTTATAAAGGTGGGTTTGGAACATTAGAAGTTGAGAAGCTCTTTTGGGGAGACAAAGGTGACAGGAAAGCAGAAGAGAGAAATAACTTGCATCTGTTTCATTTTTTTTAATTTTATTTATTTATTTTTGTGCTGAATCTTCATTGCTGTGCTGGATTTTCTCTAGTTGCAGTGAGTGGGGGCTACTTTTCGTTGTTTGGTGCAAGGGCTTCTCATTATAGTGACTTCTCTTGTTGAAGAGCAAAGGCTCTAGGGTCCACGGGCTTCAGTAGTTGCAGCACGTGGGCTCAACAGTTGGGTTACTGGACCCCACAGCACAGGCTCAGTAGTTGTGACACACGGAGTTAGTTGCTCCACGGCATGTGGGATCATTCAGGATCAGGGATTGAACCTGTGTCTCCTGCACTGGCAACCGGACTCTACCATTGAGCCACCAGAGAAGCCCTGTTTTATTTTTTATTGCTCTATTTCTTCTTTTTTTTAAAGCCACCTCAAATGTTGGGAAGAGAGAAAATCTAAGTAAATGAAAGTGAGGAATGCTACAAATTGTCTGCTTTTATTTCTGTGAGCAATTTCTTTACCTGTTTTTGCAGTTATGCCTTCCCCTTGCCAATACTGTAACATGTAAAGAGACCAATCATGGAGTCAAGTCAGGAAACATGGTTCCTCCTATTAGCAGCCTGACTCAGCTACTTTCAAGTTCTCTCTTCTGTAAAATGAAGGGGTTAAAGATTATTTCACCCTTTTCTCCAGCATCATCTCCTGAGTGGCAGGCAATCAGCCTTTTCGGTATCTGTTGATAGTCCCTATTTTCTTTTTAGGTGCCATTACAGACTTTTCCTCCATTCCTGGAATTTCTAGGTACAGAATGTAAGGAGGATGAGAAGATAGCCATGTAACTTGCTTAAAATTTATATACTAGGTCAAACCTTTATGAAGAACTTTACACGTGCTACTTGGGCTGTTTCACAGCTAGTAAGGAACACTAGAAGGGACCTTAGAGAACATCTAGTTTAATCCCTTCACTTCAGTAGATGGAAACAGGCCTAGAAATAGGATATAATGCTAGAGCGGGGCCCAGTTCTGTAGCTTCCCAATGCCTATTCGTTTACATTAGAGGAAATCGAAGCCCAGGGACTTCCATGAAGAATAGGGCCTATCAATCGAGGCAGGCTCGTTGATCACCTAGAGTCCACTCCCTCTTTTAACAGCAGTTTAGAAGAGGTGCAGCCCCGGCCAGTTTTCTCGAAATTTACTGGAACTGGATCCAGACCTCCGGGCTTGCACTGTAGCATGAATGAATGTAATCGTAGTGGTTCTGCCAACAGAGGCACCTCTCCCTGCGTCAGGCCCGGGCGATTACTCCTGGGGAGGATTAGGTGTCCTGGTCTTTGAGGTCCCCTTCCCAGGCAGGCGTCTTCTAGGTCCCCGCGTAACCCCAGCTTGGGGTGCAGCCCAGTTGGGTTGGGGGCGTGGCCCGCAGCTGCGAACCAATCCCAGGCCCCACCGTAGGTAGAGGCGGGAGGTCCGCTCCCCACCCCGCCCATTTTCCTTTCAACAGCTGGAATGCGGGGTGGTGACCTAGGCAACCGCCATAGCTTGGCGCCCACCTGCCGTTTTCGCTTCGTCACGCCCCTCTTGGAACAACCAATCGGAAAACGAAGTCCTTTAAGGGCCAAAAGAAGAAAAAGGACGGCGATTTTGATTGGCTGATTGGAAGAGTCAAGTACAATCTCTGGCTTGACCCTGGGGCTGAGGCTCCGGGATCTCGCCCAATTTGGAAAAGGTTGGAATTTGGCCATCAAGGGATAGGAGCCCTAACCACTGGGCCACCAAGGAATTCCCCACAATGCCTTCTAAAGTTCTGCATGAAGAAGCATCCTGTTTACCAAATGTTTACTGGACAGAGAAAAAGAAAGAGGTTCTTAGAGACCTTTTCTCCACAAGAAAGGCCTCCAATGCTAGGAATGGTCAGCCAGGCAACATAACAGTGATTATAACACTGAATTCTGGCTTTATTGAGCACTTACCTTTTTCTAAGCAGCATTCGAAATACTTTCTATTCATCAACTCATTTAAGCCAACAACTATACAAGGAACAAGGGAAATACCTTTTTTTTTTTTTTTTCTTTAAAGGTTTACTGAAGGGCCAACCAAAGAGAACAGGCAGCTTTTGCTTAAAAAACCTGAACTTGAAGATACCATTATTAGCTCCATTTTGCGGGTTTGGAATCTAAGCTGAGAGATGTTGGTTGGGGTGTGAATCCAGGTTGTCTGGACTCCAGAATGTGAGCGCTTAATGTCACTCTCTGAAAGCCATGGTTTCAGACTGCCCTGGTGATCACGTGGTTAAGAATCTGCCTGCCAAGGCAGAGGACATGGGTTCCATCCCTGATCCCCCATGCAGAGGAGCAACTAAGCCCATACACTGCAGCTACTGAAGCCCGTGAGCCCTAGAGCCTCTGTTCCACAACAAGAGAAGCCGCCAAGATGAGAAGCCAGCACACCACAACTAGAGAGTGGCCCCTGCTCACTGCAACCAGAGAAAGCCTGAGTGCAGCAACAGAGACTCAGAACAGCCAAAAATAAACAAATACTTTTTTAAAGGTATAGTTATACAACATAGTAAATCAACTATACTTCGATAAAAAGTTAAATAAAAAAATAAAAGGTGTATTTCACAGTGAAGGGGCTTAATTTCTTCTGTGTTAAAAACAAAGATCCATTCAATAAAATATTTAGTAATACAAGAACAAGAAAAACAATTTTATTGGAAATATTCTAACACGTTTTCTGAACAAATAATCAAAAAATAAATAAGGACATAAAAAGATAGGAACATATGAAATTTTGACCTTGAAAACAAATAGTGTACCTTCATTTCAAGTTTCATGGACAGTGACAAACTGCAATAAATATTAAACTACAGAGAATATTTTGGTAAATTTTGAAAAATAGAAATTCTAGAAGTCAGTCTCAGATCGAAATGCAGTACAACTAACAGTAATATAAAACACACCACTCAGAAACTGAAAACCATAAATAACATCTCAAATTACCCTTAGGACAAGAAGTAAATCAAGGATAAAAAGCAAACTATTTGGGGATAATGATAATCATAATAAAAGGATA TCONS_00146724 TCONS_00146725 r 5' 660 TCONS_00146724 TCONS_00146725 r 5' 660 EMBV3_10769 AAACTGTTTTCTGTAGAGATAGAAACATATAGTACCAAATCTTAGTATTGTTCCTCAGTG Gene BVT0102_036828 + 1 EMBV3_00232 GK000003.2:52391982-52450214 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07022 GGGCTTGTGCCTTCACCAATGCACTGACCCACACTATTGCCCTAACCACCCTTAACTTCT Gene GeneID:509526|LOC509526:XM_002695729:394_cdna Constitutive 0 NULL GeneID:509526 19 GENE LOC509526 NULL similar to olfactory receptor EMBV3_33798 CTAGTAGCCCTGCCAGTTTTGAGGGGCCATTGTGAAAAGCACCTGAGATCATTAGCGGTG Gene BVT0102_169240 + 0 NULL GK000011.2:75623196-76707568 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42681 GTCCCGGCTACAGCGTGGAGAGCGGCAAGATCACCCCTTCTGTGTAATTTGAGGAAAATA Gene GeneID:768071|MGC137021:NM_001077128:5_cdna Constitutive 0 NULL GeneID:768071 9 GENE MGC137021 NULL hypothetical protein MGC137021 EMBV3_19535 CTACCTGTGACTTGAAAGTAGCAGTTCTAGTTAGGAAGAAGTCACTTAGCGTCAGGGAAC Gene GeneID:541075|TMEM168:NM_001078031:72_cdna UTR3_Alt 2 NULL GeneID:541075 4 GENE TMEM168 MGC152038 transmembrane protein 168 EMBV3_16772 TCAAAGCCATGCTGTACCACTGCCTAGAGAGCAGACCCAGTCACCATGAAACCACCTCTA Gene BVT0102_035969 + 0 NULL GK000026.2:23972896-23983206 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00153608 1 XLOC_093372 NonCoding TCONS_00153608 XLOC_093372 NonCoding NonCoding - 26:23975910-23979602 - TSS114778 3692 4 TCONS_00153608_14 98 1 0 0.001260331782911 0.00112541391745138 0.000975028381798067 0.00111786578494361 0.000759566759256033 0.000346854221203053 0.000503877003845291 0.000163407340974378 0.000743708052494778 0.00024963323172151 0.000181671665042226 2.22754071342968e-05 0.000314750729844654 6.62534019312402e-05 0.000147504914532747 0.000586606382265342 0.00189316322381966 0.000217472372601644 0.00122558346931377 0.0011648089476418 0.000532814693168287 0.000576851179982113 0.000511877486514028 0.000767395014174886 0.00112972401975446 0.00057153817441832 0.000260265750835763 0.000182113588168301 0.000231422203273669 8.46794932172987e-05 XM_005225471.1 CNNM2 PREDICTED: Bos taurus cyclin M2 (CNNM2), transcript variant X1, 0.0 4470 100.00 0.670910075839653 0 noncoding 0 0 0 0 GTCATGGCTGGTCAGAAACAAAACCCAACCCTGTCACCTTCTGAAAACCAGCCACTTTCTCCTTTCCTGAGCCAGGAGACCAGTATCCCTCCAGTGTTCGCCAGGGCCCAGTCCAGGTAGAGGACTCACCTGGGCTGGCACAGGAAGGTGCTCACCTTGTTCCCTGGGATTCTAAGCAGGAGGCCACCAGGGAGGATTGGCCTGGGGCATGTCACATGACACAAGCTCCGTGTTAGCACGAGGGCGGGATACAACTCCCCTCTCCACTTTGATCCTGGAGATGGTTTTTCTTGCAGAGTGGTGGGGACTGCCAGACTGAGCTGGGCAGTTCAGGGCGTGGAGCTTTCTGAAGTGCCACTGTGCACTTTCTTACTTGAGGACATGGCCTCTGGTCCCAGGTCAGGTGTGGTTCTGTTATGGCCTCCAGACTAGTGGTGCTTCAGGCTAGCAAGGGCATCTTGGAGGGTTGGCAGGTTAATGCAGAATTAGAGGGGATTTAAGGAGTTCAATATTAAAGTGATTTAGGAATTCAGAAACTTTTCCCATGTAAACGTTATCAGTGAGGAACCTACTCAGTGGATTTTTATACCTCAGGGCCATTTGCAGATTTTTATCTTTCAACATTTCTTTTGTATTTGAGTGGGCTGTTAGAAGAGATGAGTTTGGGGAATGTTGTTCATTTGCTGTTCGTCGCCTCTGTTTTTGGATGTGCAAGGCACCCAAGCCAAGCTTGCTCAAGGCTGTGATGGTGGGCCTTCCACCTCCACCACGTGCGGGCATCCTTCCTACAGGGAGCGCTTATGAGCTGGCTTTCCTCCTGCCCTGTCTGGAGATGCCAGGAGTCCGTGGTCAGCCCTGAGAACAGGAGGGAAGAGGGCAGTTCACAGCAGCTGCAGCACCTGAGGCAGCTTTCCATCCCACCATCTTGGGCTGGGAACCTTCTTTGCGGACTTCTGTGGTTGACTTGGCTCAAGTGAGCTTTCTCTCTGTATATGCTAGAGCCACTGACATCATCTCAGAGGAATTATTTTAAATATCGGGCTGTACTTGAAGCAACATGGAAACAAAAGGTTCCAAGTGGCAGGAGAGTAAAGTTCTAGGAGTTTGCATGCCAAGGTTTATATGTACACACATCCAACACGCACTGTAAAACTTGAGTGAGTACTCATTTTCAAGTTTGAATACCCACTGGGTATCAGACATGAACGACTTGGAAGAATGACTGAGAGTACTGTCTTCATTGGCAGCGTATCTTCTGGCATTTGCCCACATCTGACCAACAAGGATTCCTTTGAGAAGTGGGCCCAGATTCCTCTTCAGACTTACCCTGGAGAGAACTGTCAAGTGTGGACCTGGAGGACCTTGGGTGCCTGCCCTTAAGTTGGAGGCCCAGGCCCCTTGGGTGTAAACAGCTGGTTGCAGGCTCATAGAGCAGAAGGGAGAGGGAGAAAAAAGGAAGGCCTCAGGCCTCTCATTGCCCAGAGCCCAGCCTCACTCCTGGTTCATTACTCCCCGTGTCTAAAGTCTACTGTGAAGGTGGAGTGTGTCAGTCCATTGACTTTTCATTTCCGGAGTCCTTTAAGTCCACAAATGTATATGCTTTATTTTATATTATTATTTATTATGTACATATGCCTCTACTGTTAGTGCATCGTCTGTGACTAAGATGAGATCTGTTCCCGAGCCCCTCATCCATGGAGCCTAGGCTTCTGTTGTCTTTCAGAGTGGATGAGAAGGAGCAGTTTTGTTTATTTTCGTCTTAAACAGGTTGCTGCTCTTACGTTGGTCCTAGTGTGCCAGGCCCTTTACTGGACCCGCCTCTGTTCCTGACAGCAAGTGTTTTGAGATGAGGATGGAGGCAGGTCTCCTACTTCATGGCAGGGCCTCTTCAGGGACCTCCATGAAATACTTTAGAGGTGGTTTCATGGTGACTGGGTCTGCTCTCTAGGCAGTGGTACAGCATGGCTTTGAGGCCAGGGCCTCCACTCCCACAATCCGAAGCCAGGTTGGTGGCCTGGCCCCACAACAGGGATGGTCTCCAGTTCCCACCTTGGATCACGGGGTCCATCTCTGTGCACCAGGGAAGCTGCCTACCCACCTGGGCTTCTGAGACGCCTTTTGGTTTTGAGGTCCGATGCCAGCACTGCCTTGGCGCCTCACAGAAGACCTGCTTTGAGTCTGATTTCCACCCTCCTTAGTCTTAACTCACTGTATCATAGTGTACATTTCATGCTTTGCGCAGCGAAGTTTTCTGAACACAGTTATCTAGAGCTGTGTCCATAAACCTAAATAAGCACAAACGACATGTATAGGTTTCATGAGCTGATTGTCATAATGAATGCATTTTATAATTCAAACGATGTTGTAGATTTACAATCTATTTATTTTGTATCAATTTATTTGTAAATTTTGTGATTGTTTTAAAAGGTTTTTGTTCATTTCTATTATTCTATTTAGATAAATGATGATTTCTGTTCACCCTTCTAGCGAATGTGTCTTCCCTCTCTCCCCTATCACCTCTGCCAACACAGGCCTCATCCCCTGCTTAGTGGGAAAGCTGAGATTGATTGTCACCAAGGCAACACAGCGGGGCATTTCCTTTGGATGTACACTACCAAGTCTTACATTAAAAGAGAAGCAGGTGCTAGAACTTGAGCCTCCAACTTCCAGCCTCGTACTCCAACTTCCAGCCAACAGCAGGGCTGTCTTCTCTTTTTCAAGGATCATAATCTGTTCCCCATCAGTTCATTTTAGATAAAGATGCTGGGGGTACCCATTGAAACTGCCCCAGACATTTGCAGCTCCATCACTAAAAACACATTTCAGCTGGCAAATGCCTTGACTGTTTTTTCCCTAGGCAAGCCCAGAGGCCTCATTCAAGCCTCTCAGTTGGCTCTTAAAGATGAAAATGGCTCTGCAGATCTTTCTCTGTGATGGGAAGCCTAATACAATGGTTGCAAGAGGCACAGATGGTCTACCAAGTTAAAATCAAGGGCATGAGTGTGGTGAGTCATGGTCGGATGCTCTTCAGGATTCCGTGGGCCTGCCTGATTCCTGTGTGAGCCCCATCCTCTCCCACTGCCACTTCTATTCCAGGCTTCTGCTCCTCCTTACCCTCCTCACTCACATGACCAGATCCTGAAGATCTTCCAGTCGAGGTTCACAGCCCCTCTGTGATCTATTCCTAGACCACATCTTCTTGGATTCCTTTTTACCTCCCCTCTGTCTCAGTTCTGCATTCTTCTGAGAATTGAGCTTCTTAATGACTAGTCCCTTGTTTTTCCTACCATGTTGTTTTAACCGTGATGTTCTTGATCTATTTTACTTACACTAGTCCTGTGGATTGGAGACATTTTAGTGAAGAACTGCTGACAAAGCTGGCTAAGACACCACCTGACCTAACCACCTCTCCCACCTCCCCAGTCATCACCCCCAATTTCTTGAAAGTGGAAAAAGGTAGAGCTACATCCCAGTTAAGTGCTATCTTCTTGGGAGCCTGTTTGCTCTCCTTAGAAGAGCAGAAAGCAGGGCCAGGGAAGGAATTCTCTCTAGCATGTCTGCTCCCAGTTCACTCCTTTGCTTAGTTTTTCCTGCTTTACTCACTTTGCCTAGGTGAGTCCTGAGCTCAAATCAGGAAATCCTCAAAGGAAAATGTGATTTTTCCTCCAGTGAAGATGAGGTTTGCCTAAGCC TCONS_00150588 TCONS_00150590 TCONS_00150591 TCONS_00150592 TCONS_00150593 TCONS_00150595 TCONS_00150596 TCONS_00150597 TCONS_00150599 TCONS_00150600 . 3' 361 TCONS_00150588 TCONS_00150590 TCONS_00150591 TCONS_00150592 TCONS_00150593 TCONS_00150595 TCONS_00150596 TCONS_00150597 TCONS_00150599 TCONS_00150600 . 3' 4052 EMBV3_16828 TGATGGCTTTTTGGTAAGGCCAAACTCATATAAGTAAAGCATGAGAATACTGACATACGC Gene BVT0102_126553 + 0 NULL GK000021.2:45487608-45519650 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121355 TCONS_00121353 TCONS_00121354 1 XLOC_073393 Coding TCONS_00121353 XLOC_073393 Coding Coding CFL2 21:45517580-45522356 j TSS90428 3277 3 TCONS_00121353_1 63 3 0.31434554973822 1.67395523226739e-14 4.12181737749011e-09 2.87493628087304e-10 1.01767614314953e-10 1.0965012288785e-09 6.69575652670626e-09 1.26747816205843e-05 7.56126871308303e-09 8.36530225739742e-05 1.28862901806531e-12 1.79290153375349e-05 1.76048047461829e-05 2.25741106198486e-12 2.07294662197908e-08 1.51561196347462e-07 0.000197428622530459 0.00123604886823473 0.000291875260144053 4.62119994768873e-05 2.93399590769527e-08 0.000170376090780014 0.000231202304460453 1.5519441259732e-06 2.88123269211918e-05 5.7134860686593e-06 1.04314471854463e-05 1.09228375325197e-05 3.09468383202926e-05 1.46005256236693e-05 8.67086488405162e-05 XM_005222049.1 CFL2 PREDICTED: Bos taurus cofilin 2 (muscle) (CFL2), transcript variant 0.0 4516 100.00 0.763808361306073 NR_028131.1 CFL2 Homo sapiens cofilin 2 (muscle) (CFL2), transcript variant 4, 0.0 3186 85.35 0.852914250839182 TCONS_00121353_1 sp|Q148F1|COF2_BOVIN COF2_BOVIN Cofilin-2; 1e-32 113 100.00 0.888888888888889 0 noncoding 0 0 0 0 -0.205288611621994 0.157966799485275 0.00976215232361592 0.831755616624808 GCCTGCCCCTCCTTCTCCTCGCAGCGCCACACCGCCGGAGCCCGAGCCGCCGCCACAGCCTCAGCCGCGGGCACTATGGCTTCTGGAGTTACAGTGAATGATGAAGTCATCAAAGTTTTTAATGATATGAAAGTAAGGAAATCTTCTACACAAGAGGAGATCAAAAAAAGAAAGAAAGCAGTTCTCTTCTGTTTAAGCGATGACAAAAGACAAATAATTGTTGAGGAAGCAAAGCAGATCTTGGTATTAAACATGAGTGGCAAGTAAATGGCTTGGATGATATAAAGGACCGTTCCACACTTGGAGAGAAATTGGGAGGCAATGTAGTAGTTTCACTTGAAGGAAAACCCTTATAAAGCAGTCAAGTGCCATCTGGATCTTAAGGAGCTTCCATTTCTCCAGCTCAGTCAATTGGAATAGTATTAGGTTTTTTTTTTTCTCTTTTCCCACTGGGTCCTTCCAACACAATGAATGAAGGAAATATCATTCATGTAAGCAGCCTATCAGTGATTGCCATTAGACTGTTTAATACTGTTACTTTTATGTAGAACCCAAGGAATGCCTTCCCATCATATTTTAGCCAAAACAACTGGGTATATGCCTCCTTTGCAGCAAACACTACAGTGAATTGTGATTGTCAATGTGAATAGCTTAGAACACTACAAAGGGTTAAGCTAATTGAATGCCTTCAAAGTATTATCCACTGGTGAGATGGTAAACTCTATTCAGTATTACTGATAGTTGCACTTGACTGCAGTTCTGTGAGCCTTGAGCATTCATACACCTCACCTGCCTTGGCAAGCCTATTTTTTTTTGACATGGCAGCACGGATATAACACTATGCATTAAAAGCACTTTTTTTGTAATAAATTTAATCCCCCACCAGAAAAGGAATGCCAATTAAGTTGTGTTAACTGTGTCATCAGCTTATCCTAGTACCTCAGTGTTCATTCCTTTTACCTGCATATCTTCTTAAAAGAAATAGCTATTATTAATGCCTTTTTTCCCCCATTGAGTGTATACTACTGAATACACGTAGGAGTTTTATGTTTACCATGTAAGTCTTGCAACACTAAAGATATTTTGAGTATCAGTCATGATGGCAATTTCTGTATAAAAGAGCCTTAAATGGAACATTGTTTTTGAGATCAAACTCCCCACCCTCACAAAAATGGCCACGTTGCAATAAAAATTGTGGCATATTACAGAACGGTTGCCTTGTTTTCCTTGGACATTTTGCAAAATACCATGTGAAGCAACTCCTAGGCTAAACAGCTATTATTAATCTCTGCACTGGTCATTTAAGAATTTTTTTTGTACAACATTCTTGCATGATATTTTCCAGTTTGTTGATTTTATTTGGTTTAAAAAATATTCTGTCCTAAAGCTAATATAAAATATTACAGAGGTATACTTTTATAAGCTTTATTTATTTCCTTATGTATTAATATGGTGATCAGGAATTGTTTTTTGCACTTTGACATAAATACTCTTCAGTATCTGATTAGTTCTCTGAATAAATTAGCATAGTTATTTTTTTAATTCACGTTTACATTTCTAAGTAGTTGACCAGTAGAAGAAATAGGAAGCTCTTATTGCCTATTTGGTCATAATGAAAATAATTTATAAAATGTTGTCCTTCAAAAGTTTAATAGTACTTCTGTTTAGGAACTTTAATTTCAGCTACTATTTCTTAATATATTTCACAAATTCACACAAAAAATGTTTATATAGCAGTCTTAAAGATTAGTAGTGGAATTTGGCTGTGGTCCAGGCGGCTCTCCTTATAGAGAATTTGATCTGTTCAGTGTGAGCAGTTTGCTGTTAGCCAGAGCTATTTATGGCAAACACATGCTTTTGTATCTTGTCATAGTTACCCACAAATGGCAGAACTGGACTTGAGGCTACTGGTATGCAAAACAGGCGTGCTAGGAAGCAGTGGCTTGCAGCTTCGAATTTAACCCCATAGCTCTGAAGAATGCCCTTATTAGAAAACAGGGACTGAAAAATCCCTTCTTTTTCTGATGTCTGGAAGTAATTTTGAGTTTAATTAGTTTTTTTCCCCCATGTTTTCAAAAGGTTTTTCAGATGAAAACAAAAATAGGAGGTAAATGTCTAGGTTTCCATTTAAAATTATATGAATGGCTTGGGATCTTTTGCACTGAGCAATTTTATTTCAGGCTTCCAGCTGTCCCTGTGAATTATTCTGGACGTTTTGATGGCTTTTTGGTAAGGCCAAACTCATATAAGTAAAGCATGAGAATACTGACATACGCTAAACCGTATGTGAAACTGATACTTGTACCATGAAATTTTTCATTATTTTCCTCATTCTAAAAAATAAGGGACTCTAAAGTTGTGCAGTCTCTTGTCTTTTTATAGCTGATTTCTCAACTTTTCTTACGTACCTCTTTAATTATATAATAATTTCAGAGGTTAAATATTGCTTTAAACTGTGGTACTTTGATTTGTTAGATTGACAGAACTGATACTAATAATTAAGTTCATCTTTGAAATACATCTTTGTGCATAAAGCCAAAAATAATGATAATTAATGGTTCTTATGTTACTTGAGACTAATTTGGCATTTGAAATGATCATTCTACTTTACAATCATTTACATTTGAAACAATGTTCCAGTTAGCTTTAAAAGGTATACGGTGCTAATTAGTAAAATATCAAGGACAATATTTTACTGCTAGCTTGCAAAATTATAAGTGTTTAAAAAATAAAATATATGAAACTATGTAAAGCTGTGGAGATGTGTTTACTTATACTTTGGGACACTAAAATTTTTTTTAACTAATATTTCAAATCATTATCTTTAGTCTATTTTTTAGGATTTTAGTTGATACACTTTCTCGATAGATAACAATATTCTTTCAAAACAAAGTGTTGCAATTAATTTTGACATCTTTCAGACAAATGGAAACAGTTGGCATTTGTCCCAAACTGGCTATCAGCTGTTGTTTTCCATCATTATCAAAAATAATGTGGCCAACGTTGTGCATTTAATGTGCCTTTCTGATAGTGTAAGAAAAGCCTCTTATTAGGTTTGAATTTCTCTGATATGGATTCTTTGTAACAGCTAATTTATGGAATACAGCAAATGAGCTCTAGGAGAAAATTATTTTTCCTTGTTAAAGAATAATCTCAAAAAAAAAAAGAATAATCTCAGCAATGGTAATCATAGAAACACTATGGTAATCATTGGTAATCATTGAAACACTTTTCCTTAGGTTTGCCACAGAAAAATAATCTACTTTAGTTCTTTAAT EMBV3_41967 TACTTCCTGTCATAAGACTCCAGATAAAGTAAACCACGCAGTGCTGGCTGTTGGGTACGG Gene GeneID:510524|CTSH:NM_001034385:21_cdna Constitutive 0 NULL GeneID:510524 21 GENE CTSH MGC127527 cathepsin H EMBV3_06337 TCAAGGGCCCCCTCCCCATACCTGAGCTCGATGGCGGTGGGACCCCCCGACTGCCCTGTG Variant GeneID:614852|INO80E:NM_001046544:404_cdna 593^709 1 EMBV3_24199 GeneID:614852 25 GENE INO80E CCDC95 MGC137340 MGC159449 INO80 complex subunit E EMBV3_16040 TGTGCTTTACCTACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCATGTGG Gene GeneID:533187|BBX:XM_002684733:131_cdna Constitutive 0 NULL GeneID:533187 1 GENE BBX NULL bobby sox homolog (Drosophila) EMBV3_29183 ACTCGAAAAGACTCTTCTGGGACATTGCAAAACGTGTGAAACCCACAGGGTCCCTTCTCC Gene GeneID:514901|DDX59:XM_002694276:291_cdna Constitutive 1 NULL GeneID:514901 16 GENE DDX59 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 EMBV3_07159 GGGCCGCCCGGAGCCGGCAAGGGTACCCAGGTGAGTGATGAAATGGTCTTGGAGCTCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43630 TTTTGCCTCAACTGTCAAATGTGTTCAGTCTCTAGTCTCACGCTGGGCACTTTCTGCCCC Gene BVV0102_285180 + 0 NULL GK000018.2:64638330-64654796 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15874 GCAGGGGGGCTCACAGCTGCCTGCATCCCGGCCTGCTGCTGCCCTGGCGCTGGCTGGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38880 GCCTGATGTTCTGGAGCCGGAAACTGGGGCTTTCACTTTAATTCTGCTGCTAAGGATACC Gene GeneID:519328|SIRT4:NM_001075785:189_cdna Constitutive 0 NULL GeneID:519328 17 GENE SIRT4 MGC138990 sirtuin (silent mating type information regulation 2 homolog) 4 (S. cerevisiae) EMBV3_28621 GAAGTGGGTGTGTGACCGAATCATCAACTTCTCAAGAGAGACAGAACCACCTGTGTCCAG Gene GeneID:506950|MAP7D3:XM_002699604:124_cdna Constitutive 0 NULL GeneID:506950 X GENE MAP7D3 NULL MAP7 domain containing 3 EMBV3_02369 TAAGCCATGTTTTAACTGACCATTTCGCACAGCTGTATGTTCCAAGGGGTAGCTGCGCGG Gene BVV0102_086341 + 0 NULL GK000021.2:71206429-71272449 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19339 TTCAGGCTATTCTTTGGTGTACAAGTTGAAAGCCTTCTTTAAGAAGACTATTTACCCAGG Gene GeneID:506947|METTL8:XM_002685302:123_cdna Constitutive 0 NULL GeneID:506947 2 GENE METTL8 MGC142470 methyltransferase like 8 EMBV3_21915 TAGACTCGGGCTGGGAGAGGAAAGGGCTACACAGTAAGGGGCTAAAGCTCATGTTGCAAA Gene GeneID:407226|MOGAT2:NM_001001154:2_cdna Constitutive 0 NULL GeneID:407226 15 GENE MOGAT2 NULL monoacylglycerol O-acyltransferase 2 EMBV3_07390 GATTCTTTATCTGCTGAGCCACCAGGGAAGCCCACTGCTATAGACATTTCCTTGCAAATG Gene GeneID:528275|MAGEB16:NM_001105399:40_cdna Constitutive 0 NULL GeneID:528275 X GENE MAGEB16 MGC152357 melanoma antigen family B, 16 EMBV3_34470 CAAGTTACTGAATCAGCTGCAGTACTGTGAGGAGACAGGCATCCCACTGGTGGCCATCAT Gene GeneID:510937|HARS:NM_001046066:223_cdna Constitutive 0 NULL GeneID:510937 7 GENE HARS HARSL MGC137668 histidyl-tRNA synthetase EMBV3_25598 GCTTTTGGAGGTCAGAAGGAAGGGCTTCGGGTCTGGGATATAAGCACAGTCTCTTCAGTA Gene GeneID:514147|PWP1:NM_001046166:31_cdna Constitutive 0 NULL GeneID:514147 5 GENE PWP1 MGC137879 PWP1 homolog (S. cerevisiae) EMBV3_36951 GGTTGTGGCCCCCAGTCAGCTCTGCTCAGGACCTGCTCTATTTCAGGGAAGAAAATTTAT Gene GeneID:527885|ZDHHC9:NM_001034561:8_cdna UTR3_Alt 2 NULL GeneID:527885 X GENE ZDHHC9 MGC127273 zinc finger, DHHC-type containing 9 EMBV3_13867 CCGGCTAAAAAAGTTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACCAAGGCCCAG Gene GeneID:519934|H2B:NM_001114854:131_cdna Constitutive 0 NULL GeneID:519934 23 GENE H2B MGC133641 histone H2B-like EMBV3_35106 TCTGAGGTCTCCATATCTTGTTGGCGTTTGGGGGCATTTTACACAAGGCTATAAAATGTG Gene GeneID:281358|NPR3:NM_174127:4_cdna Constitutive 2 NULL GeneID:281358 20 GENE NPR3 NULL natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) EMBV3_31326 TCTCATCTGACCCTCTAGGAGATCCAGAAAATTATACGCTAACTCCTTCAACACTCCACC Gene BVT0102_112382 + 0 NULL GK000002.2:136678831-136762440 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104276 TCONS_00104279 TCONS_00104280 TCONS_00104277 TCONS_00104274 TCONS_00104282 1 XLOC_062340 Coding TCONS_00104279 XLOC_062340 Coding Coding - 2:136671078-136690001 - TSS77259 3971 1 TCONS_00104279_5 131 0.582976580206497 3 0.790297008772857 0.000139660713278232 0.000259288201114686 0.000106276239953666 0.000447078354775654 3.94047697367376e-10 0.00020566764502825 4.3603618739876e-05 1.24411783977266e-08 0.000183076068670256 1.28529269006782e-25 3.32065329203611e-08 3.25301345183464e-29 1.21007182260701e-15 0.000166416068279022 1.0408326597809e-13 0.0058506416232153 3.06012278253049e-26 1.9193147447293e-28 0.000440777325904419 0.000533313273250259 0.000320565841595245 0.000375178232952525 0.00115192333354036 0.000252057609840763 1.07504229289292e-07 2.60937196382183e-10 0.000507774860682536 5.81318075688015e-11 0.000112773942912526 0.000106805186472923 XR_233797.1 LOC101905127 PREDICTED: Bos taurus uncharacterized LOC101905127 (LOC101905127), 0.0 807 100.00 0.112314278519265 TCONS_00104279_5 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 2e-09 55.8 33.98 0.755725190839695 0 noncoding 0 0 0 0 1.47584228809688 0.00174927197262074 NA NA GATGCGGCGCGGCGGGCCGCCGGGGACGTTTGTGTGTGGGAGGGGAGCGCAGCGGACTGGGACCGGACCCGGGACTGAGGGGACCCCGCACAACGCGAGGGTGCGGGGCGCTGCCCGCCGAGCGGGGCCGAGGACACAGGCCTGCGAGGCCCTGGAGGAGCTGGTCGTGGTGGAGACCGATGCTGCGCGTGTGGGATCACTTCATTCTTTCGTTCGCTCCGCCAGCGGTGGCTCAGCTCCTCGTGGATTCTGAGGGTGGAGCGAGTGACCCAGACCGGCGTCGCGGTTACAAAGTGTAGGCTGTGGAGCCAAGCAGCCGGGTTTGAATCCTGTCTCGGTGCTTGCCAGCTGTGTTCTTAGGTAGTGAGCTGGAGGAGGAGAGCCAAGCTGGAGTTTCCCTGGACAAGCTGTCGGAACAGAGGAGCCTGGGCTTCTTGGAAATCTGAGATGGGCCTGATAATCTATGTGAGCCTACTTCTGCTGACTGCAAAAGTCCTGAGTCTGCCGTTTGATCCTCAACACAATGCCTTCCTGTCCTGCGCTCACTCCTACGCTGCATTCCACAATTGGTCTAAATGCTGGGTCTGCGGAGCGCCCCCCTCTTCATCAGTGGAAGGCTTCCCGTGGTGGATGTCTCCACTTCAAGGAAAAGACTTTCTCCAAGTCTGCGAACACCTTCGACGTCAACAATCATATGTGATGCCTCTTCTTCATCTGATGACATCTAACAATCCTCAAGTGGACTGGTGCAACACTTTGTACCCTAACTATGGACATAATGTGACTTTTAGCGTTGCTGATTGTTCTGTTCTGCCGTTCGCTCCCCGCTCTGTAACTGTGTAGCTGGATTTGTTTGTAGGCGCGTGAAAGCTTGTAAGTTACACGTGGTTGCTCAGACTCCTGCCACTGTAGCAGCTTCCTCCAGCTACTCCTCCAACTACTGCTTGGTGTCCCTGGGTCAGAGACCCCTGATATGAGGGTTAGGAGAATATGTTGCCTCAGCAATTTAGAGACGATGCTCCTTTGCTTAGGCAACATGATCCTCCTGAAGGAAAAGAGGGGAACGAGAGGGTAACGGGCAGGAAGGCCAGGGGTCTCCAAAGAGGAGGAGGAGGAGATAGGCTGCACTGGTCAGACACTATTTAGCTCTCAAGCGGCAGGAGGAGACAAACTACAAGTGTCAGATGTTTGGCTTCCCTGACAGCTCAGCTGGTAAAGAATCCGCCTGCAATGCGGGAGACCCCGGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTACTCTGGCCTGGAGAATTCCATGGACTGTATAGTCCATGGGGTCACAAAGAATCGGACGCGACTGAGCGACTTTAAATATAAATGTAAAATACAAATTTAAAAAGAGGTTTCTTTTATAATCTGTGTTGCCATGACGACACCTGGTTCCACCTGAACTTAACTTTCCTCAAACCTTGAGCTAACCGATGCGTTTTTCTTATGGAAATGTTTTCTAAGCTCTGCTAATGAACTATGTATTTACCCTAGGCTGTGTCTTTAAGTCAGTTCCACCTAAGACTCAGAACTGACTTGACAAACCAGTGCGTTTTACTCTTGCAAATGTTCTCTCAAGCCCTGTTAGTGAGACTGTGTTTTTGCTTGGAAACCTGTCTTTCTTCAAGATTCATGTTGATCGTTTATGGCCCGGGATGACCGCCTGGTGCCAGTGTTAGCTCAGTGCATGTTGTGGGTGAGGGGCCTGGTGCCAGTCTCTGAGTTTTGAGACATCTCCTTTCTCTAACCAGCAGCCTGCTAGTAGCTGTGTATCACCTGGCTAAAGACTAGCAGGGGGGCACTCTTTCTGCCCCTTTCTGATGTCTGTGTCAGAAGCTTTCTCTCTTTCTTTTGTACTTTAAAAAAATATTTTACACAGAAGCTCTGAGTGATCAAGCCTCGTCACTGGCCCAGGATTGAATTCCTCTCTGGAGGCCAAGAATCTGGCGTCATTCATAGCTCAGCAACAACCTTTCATCTACCTTTGGGCTATTGTGAATAATGTTGCTAGGAATAGTTGTGTACCGGTTGTTTGAACAGCTGTTTTCAGTTATTGACATGTATATCCAAGAGTAGAGCTGGTGAAATAAACAGTGTATTTTTATCTTTCTGAGGAAATGCCAAACTATTGTACATATAGTCTACTATTTTCCATATCCACAAGCAAAGTGTATGGTTTCTGATTTTCTACATTGCTGTTAATATTTGATCTTGATTCTAATTGTTTAGTGAATGTGAACAGATATTGCATTGTGACTTTAATCTGTATTTCCATCATTACAGAAAAGGAATATACCCAAGACAACTTTTAACTCAAACGTCAGCATCCTGCTTAGTAGCCATAGCTATTGCATTACCCAAAGCTACTAACAGTTACCCTATATATTAAAAAAAATTAATCCCCAAAATCACTCATCAAAATTCATTAGGATAACACAAACAATTCTACCATGTTAATAAATCCAAACCTACTACAAATTTATGAAGATTTTGGAAAAGACCTTATAAAACTGTCACGCTAGTGTATGTTCCTTGGCTCTTTGTCTCGTCACAACAAAGATTTGGAGTGACGGACATTAAAGCCCCCTCGGCGTGTCACAGCTCTCGGGTCTTGGATAGACCGTGTTGTAGCTCTCAGGTCTCAAAAGGACCGTGTTAAAGCTCTTAGACAAATCAGTGTTACAGCTCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAAAGTCCATCTTCAAGGCGTGAGGGCATGTCGATCCAAAGACACAAGATATTGTTTGTTTTACTTGAGGTCCTCACTCGGGTCCTCGGACCTTCCTTTGTTCTATTTCCGCGGGCTTTTCCCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACAAAACTAACAATACAATGAATGTCATCAGTGTTCTTATTTGGAATTGAAACATGGCAATGAAAGGAAAAGTCATTGTATTTTGACTGTAAGAACAGTAATGATGAACATTTGAAAATTCAAGATGTTAATCATAATTGTTAACAGTGCATTTACTGATCTGCCGTCCCATCAAATATCATAACGAAATCCTTTTGTTTGCTTTGTATTTGTTTACTTTTTCAAATAAAATCACAACAGATGTATTTCCAGCAGTACGCTGTACATGAAGTGCACGTCACATGTACCAATATGTAAACAGGCCATAGATTGTTTGTTTCTCACATGGGAACGGAGGTTCTGTGTTCGTTCTTTCTTTTACTCATGTAGCAAGAAGCCTGCCATGTGAACTTTACACGGTATTACAATTGTGAACGTTAGAATCACCTTACTGTTTCTTTAATAGCCATAGCGTTTACATGTTACCTGTTGCAATGAGTCTAAATGTCCTTTTGAGGAGAAACAGGTTTGTCAAGCTTTATTTTAGCCATTCCTCCCATTGGCACTGGGTTATTCAAAAGAATCAGAGGAGGATTCTGGTCCTCATTTGATTCTTTGCCTTCCACTTTATCCTCCCATTTTTTAAAAATTGCAGTTTTAGCAGTTGATTACTAATCTTTCATGAAACAGAGTCTAGTAATCCAACAGGAATCTCATCCAGTTCTAGCAAAATCTCATTTCATCCAAACTACAAAGTTGAGGATCCCTGGGTTGCTTTGTTCTTATTAATAGTCTTAATAATTCTAATACTATTCTCATCTGACCCTCTAGGAGATCCAGAAAATTATACGCTAACTCCTTCAACACTCCACCTTCACATCAAACTGAAATAATGCTTGTAATTTGCATGTGCTGTTCTGTGGTCTGTTCACACTAAGTGGGTGTATTATCCCTAATGCTCCCAAATGTCATTTGGCAGTCGTCCCAGTAGTCTGTATATCAGAACAATAAAGTACGACATTGATGCCCCTCAG TCONS_00107061 TCONS_00107062 TCONS_00107063 r 5' 20161 TCONS_00107061 TCONS_00107062 TCONS_00107063 r 5' 20161 EMBV3_19545 CAAGTATTTGATAAGTCTTTTTCCGCCCTAGTGGCCTGTTTCCCTGCCTGGGGGTTAGAG Gene GeneID:614739|RPRM:NM_001080739:148_cdna Constitutive 0 NULL GeneID:614739 2 GENE RPRM NULL reprimo, TP53 dependent G2 arrest mediator candidate EMBV3_31643 AGCCCAACCACTAAGCTAGTTGTCGCCAGTTGTTGTATAAAACCCACTGTTCATCACATC Gene GeneID:508235|FBXO7:NM_001038059:19_cdna Constitutive 2 NULL GeneID:508235 5 GENE FBXO7 MGC134509 F-box protein 7 EMBV3_32035 TCCCAGAATCCAAAACAGACCTGTCTCCACTGGGCTAAATAATCAAACTTGGAGGGACCC Gene BVT0102_244018 - 1 EMBV3_40441 GK000013.2:62054882-62068568 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049508 1 XLOC_029639 NonCoding TCONS_00049508 XLOC_029639 NonCoding NonCoding - 13:62060054-62060381 - TSS36684 327 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00338367373973132 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.174007154296763 0.165955084728078 0.0476731363189091 0.453050186587289 GGGGCAGAGTCCTGCTGTGCCCTGCCTCCTTTACCCTTCCCTTCTCCCAGCAAGAAGCGGGCTGCCTTCTTCCCAGCAATCCTGGCCTTTATTCTATGCACAATCATTGTAAGGGCACCCCCAGGCCAGGCTGAAGGGATGGGGGCCCTGGAGCACCTGCAATAATTCCAGAGTGGTGGGTAGCTTGAGACAAAGTGAGTGAGAATGGCACCAGGTAGAAAAAGGATGTTCTTCCATCTCCCTTTTCCCCCAATCCCAGAATCCAAAACAGACCTGTCTCCACTGGGCTAAATAATCAAACTTGGAGGGACCCTATCTGAACAGCCC TCONS_00043385 . 3' 5174 TCONS_00043385 . 3' 5500 EMBV3_37763 CGGTCCTGAAGGGAGCTTGCTTGGCAGGTTTATCCACACTCTTGCAACTAACGCACATGA Gene GeneID:618534|LOC618534:XM_002695545:10_cdna Constitutive 0 NULL GeneID:618534 19 GENE LOC618534 NULL similar to hCG96018 EMBV3_11473 TCAGTTGTAACAGATGCACCACTCTGGGGGAGGCTGTTGATAAAGGAAGAGGCTGTGCAT Gene BVV0102_329869 + 1 EMBV3_12496 GK000004.2:89162120-89213078 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24118 TGCCCTGAAGAAACAAAGCGGGATACCTTTTTGTCCCCAGGCTGAGAAGGCTGGGCTAGA Gene BVT0102_401227 + 0 NULL GK000025.2:2285933-2286162 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145924 TCONS_00145926 TCONS_00145928 TCONS_00144259 TCONS_00145929 TCONS_00145931 TCONS_00145925 TCONS_00145927 TCONS_00145923 TCONS_00145930 2 XLOC_088977 XLOC_088507 Coding TCONS_00144259 XLOC_088507 Coding Coding TCEB2 25:2281867-2286127 j TSS108353 717 1 TCONS_00144259_1 84 4 0.83258980981451 0.00381415932512663 0.00101777861061203 0.00225366945531855 0.00118510381630046 0.00302727774570701 0.00158837058245859 0.000495597986301519 0.000828302506469243 0.00182557557483165 0.00115359470006247 0.000353021410388344 0.000982972392500009 0.000437705087282572 0.00205527310365838 0.000395480999222268 0.0309875153812064 0.0235026073238674 0.0189058081689822 0.00195877926493814 0.00279319524402482 0.00214140140575356 0.00566424476699541 0.00518058612604797 0.00787549423982873 0.00193426321658552 0.000177320704663802 0.0027365693647421 0.00655763587877607 0.00333242446484348 0.00148559114574147 NM_001034800.1 SIII Bos taurus transcription elongation factor B (SIII), polypeptide 2 0.0 715 94.83 0.619246861924686 NM_007108.3 SIII Homo sapiens transcription elongation factor B (SIII), polypeptide 5e-149 531 83.10 0.697350069735007 TCONS_00144259_1 sp|Q15370|ELOB_HUMAN ELOB_HUMAN Transcription elongation factor B polypeptide 2; 1e-26 97.4 100.00 0.535714285714286 0 noncoding 0 0 0 0 -1.299157262966 0.00874609901834092 0.130793416025824 0.0816290269916214 TCGGGCGCGGGGTACGCTGGGGCCGGCGCGCGGGCTGCCGGGAACGGGGCGGAGCGCGGCCGCGTCGGCGCGTCGAGGGGGAGAGGCAGCCGCCGCGATGGACGTGTTCCTCATGATCCGGCGCCACAAGACCACCATTTTCACGGACGCCAAGGAGTCGAGCACCGTGTTCGAGCTGAAGCGCATCGTCGAGGGTATCCTCAAGCGGCCGCCGGATGAGCAGCGGCTGTACAAGACCCTGCCTTCCTCTCTCCTCAGGACGACCAGCTTCTGGATGACGGCAAGACGTTGGGCGAGTGTGGCTTCACCAGCCAGACAGCACGGCCTCAGGCCCCCGCCACTGTGGGGCTAGCCTTCAGGGCAGATGAGGCATTCGAGGCCCTGCGCATCGAGCCTTTCTCTAGCCCACCTGAGCTGCCGGACGTGATGAAGCCACAGGACTCAGGAAGCAGCGCCAACGAACAGGCTGTGCAGTGAGAGGCCTCCCCCAACTGTCCCCTCAATAAAAGATTTGGGTGTCCACCTGGTTGCTGCTTCTTTCTGCACACCCTCTCCTGACTCAGGCATGCCCCTCCCTGGTGTGTGGCCCACCCTCAGCCTCTAGCCCAGCCTTCTCAGCCTGGGGACAAAGAGGTATCCCGCTTTGTTTCTTCAGGGCAGCCCCACTTTGGGGGCAGGGGACACAGCCAGAAAGCAAAGGCAGCTCCTCTCCTAGCC EMBV3_35572 AAGCTGCTGTCACCGGGCTCTGCACAGACAGGGCGACGCAAAGCAAGGCAACGATGACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08368 GACCCCAAGTACCCGCAGCAGTGGCACCTGAGCCCTGAGGGCAGCTATGACCTCAACTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24739 ACATGAGGTCATAGGAGATTGGGCTTCCCCGATAGCTCAGTTGGTAAAGAATCCTCCTAC Gene BVT0102_319441 - 1 EMBV3_33423 GK000007.2:92391410-92404696 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214536 TCONS_00214535 1 XLOC_130716 Coding TCONS_00214535 XLOC_130716 Coding Coding POLR3G 7:92401404-92414827 j TSS160443 841 1 TCONS_00214535_1 141 0.223543400713436 5 0.937714200566235 0.00195078734699528 0.00422766535241066 5.61359738661479e-16 0.000655988382048342 0.00132503496632892 0.000699470013652439 4.30183778445404e-40 0.000630064789311192 0.000744587267116367 0.000498204688916803 3.42704071256428e-05 3.180887360512e-05 4.72693032608363e-05 0.000178621988835047 0 0.000192109281324746 0.000696533871668585 3.22189720980351e-53 5.70298813303311e-05 8.63644515696549e-42 2.76153375551369e-05 7.17552171600313e-05 0.000243232733712183 2.01907316445506e-136 0.000172374771227005 0.00200858194440199 0.00025113442397657 5.09065180819412e-87 0.000209888795784711 0.000157171849365343 XM_005209731.1 POLR3G PREDICTED: Bos taurus polymerase (RNA) III (DNA directed) polypeptide G (32kD) (POLR3G), transcript variant X1, mRNA. 0.0 753 100.00 0.494649227110583 NM_006467.2 POLR3G Homo sapiens polymerase (RNA) III (DNA directed) polypeptide G (32kD) (POLR3G), mRNA. 3e-120 435 91.00 0.368608799048751 TCONS_00214535_1 sp|O15318|RPC7_HUMAN RPC7_HUMAN DNA-directed RNA polymerase III subunit RPC7; 9e-65 201 92.16 0.716312056737589 1 coding 0 0 0 0 -1.00795321470151 0.0257044127994957 0.0171851554542598 0.745894819382879 TTTCTACCAGCTGAGCCACAAGGGAAGTCCAAGAATACTGGAGTGGGTAGCTCATCCCTTCTCCAGTGGATCTTCCCAACCCAGGAATCGAACCGGGGTCTCCTGCATTGTAGGAGGATTCTTTACCAACTGAGCTATCGGGGAAGCCCAATCTCCTATGACCTCATGTTAATTTTATTACATCTCCAAAGACTTTATTTACAAACAAGGAAGGTCATATTCACAGTTCCAATGGCTGGGAATAAAGGAAGAGGACGTGCTGCTTATACCTTTAACATTGAAGCAGTTGGATTTAGCAGAGGTGAAAAGTTACCTGATGTCGTATTGAAACCACCCCCACTGTTTCCTGATACAGACTATAAACCAGTGCCACTAAAAACAGGAGAGAGTGAAGATTATGTGCTCGCCTTGAAACAAGAGTTGAGAGAAACGGTGAAAAGAATGCCTTATTTTGTAGAAACACCTGAAGAAAAACAAGATATTGAAAGATATAGTAAAAGATATATGAAGGTGTACAAAGAAGAGTGGATACCAGAAGCTGCCTGTATGCAGAAGCCTAAGTCACGTTTACAGCATTGGTTGCCTTCCTGAGTTGCAGCGTCTCTTTTCAATGCTAATTGCTGATAATGTTGTGTCCCTCTGGAAACACTCCTCTTAGGTCTCTCATTTCTTCTACTACATAAATATTTGTCTCTAAATGATTCTCTTTAAGTACTTTGTCGTGATCACCTATGGATCATTTATGAAAGCAAACATATTAGGTTGGTATAAAAGTAATTCTGGTTTTTGTATTGTTGAACTTTGTTTTTTGATACTGGAATACATTCTTAAATAAATGTGG EMBV3_26958 GGAATGTACCACCCCAATAGTTTGAGAGTTAGGCAAACAGAATTTCCTTGGGGAAGGAAG Gene BVV0102_025937 + 0 NULL GK000008.2:78204681-78223813 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228300 TCONS_00228299 TCONS_00228301 TCONS_00228302 1 XLOC_138472 Coding TCONS_00228300 XLOC_138472 Coding Coding UBQLN1 8:78221511-78279866 j TSS170256 4109 1 TCONS_00228300_3 343 10 0.929756314905576 0.00143880210092614 0.000875463819555815 0.00115335589637191 0.00134250535657982 0.000964579993706345 9.19590547911834e-08 6.00582227516475e-07 0.000303587153510031 0.00112752772152119 2.08810649695299e-07 4.09109273795285e-08 0.000146205364653184 0.000178158495183202 0.000424446614018005 4.5069331820169e-08 0.0022127154363901 0.00186191451521855 6.63943129699318e-06 2.02968178385038e-07 4.3032118944467e-08 9.29168792872424e-11 0.000906809652144397 9.93183340264732e-08 0.000279441207699078 0.00069091230579204 0.00031329361648816 6.50368511090202e-07 1.60978194975815e-06 1.57504563190772e-08 4.58602312894787e-11 XM_005210304.1 UBQLN1 PREDICTED: Bos taurus ubiquilin 1 (UBQLN1), transcript variant X1, 0.0 5243 100.00 0.707228036018496 NM_013438.4 UBQLN1 Homo sapiens ubiquilin 1 (UBQLN1), transcript variant 1, mRNA. 0.0 3900 90.04 0.70820150888294 TCONS_00228300_3 sp|Q9UMX0|UBQL1_HUMAN UBQL1_HUMAN Ubiquilin-1; 0.0 621 95.63 0.997084548104956 1 noncoding 1 1 1 1 0.0359741952198843 0.819200485542981 -0.00102090340235476 0.982564734844794 GGGGAGGAGGAAGCGGCGGTGGCGGTGGCTGCTGCGGATGTCGCTGCGACTCATCGCCGTCTGAACACACAGCGGCTGCTGAGCGCCCGACCAGGGCCTGCGCCGGAGCCCACGCCAAGCTCCGCGGCTCCTCGCCCACCAGGGCGGCCCTGAGCCAGTTGTCACTGAGGTAGCGCGCCCCACATTCTCCGCTGCCCGGCCAGGCCAGGCCGGCTCTGGCGTTGCCTGGCTCCCGCTCGCTCACCCGCTCCCTCCTTTGCGCCTGAGTCACCGCCGCCGCCATGGCCGAGAATAGTGAAAGCGGCGGCCCTCCGAGTTCCCAGGACAACGCCGCCGCGGCCGAAGGTGCCGGCGCCCCTGCCGCCACCGCCTCCACGGAACCCAAGATCATGAAAGTCACCGTGAAGACCCCGAAGGAGAAGGAGGAGTTCGCAGTGCCCGAGAACAGCTCCGTCCAGCAGTTCAAGGAAGAAATCTCTAAACGTTTCAAATCACATACTGACCAACTTGTGTTGATATTTGCGGGAAAAATTTTAAAAGATCAAGATACTTTGAGTCAGCATGGAATTCACGATGGACTTACTGTTCACCTTGTCATCAAAACACAAAACAGGCCTCAGGATCATTCAGCTCAACAAACAAATGCCAGTGGAACCAGTGCTACCACATCATCAGCTCCTAGTAGTAACTCCACATCTGGTTCTGCCACTAGCAGCCCTTTTGGTTTAGACATTGGAACTTGCTAGGAATCCAGCAATGATGCAGGAAATGATGAGAAACCAGGACCGAGCCTTGAGCAACCTGGAAAGCATCCCAGGGGGATACAATGCTTTACGGCGCATGTACACAGATATTCAGGAACCCATGTTGAGTGCTGCACAAGAACAGTTTGGTGGTAATCCGTTTGCTTCGTTAGTGAGCAATACATCGTCAGGTGAAGGTAGTCAGCCTTCCCGTACAGAAAATAGAGATCCATTACCCAATCCGTGGGCTCCACAGGCTTCTCAGAGTTCATCAGCTTCCAGTGGCACCACCAGCTCAGTGGGGGGCACTAGTGGTAGTGCTGCTGGTGGTACTGCTGGGCAGAGTTCTGCTGCGCCAAATTTGGGACCTGGAGTAGGAGCCAGTATGTTCAATACACCAGGAATGCAGAGCTTGTTGCAGCAAATAACTGAAAACCCACAACTTATGCAAAACATGTTGTCTGCCCCCTACATGAGAAGCATGATGCAGTCACTAAGCCAGAACCCTGACCTTGCTGCACAGATGATGCTGAATAATCCCCTATTTGCTGGAAATCCTCAGCTTCAAGAACAAATGAGACAACAGCTCCCAACTTTCCTTCAACAAATGCAGAATCCTGATACGTTATCGGCTATGTCAAACCCTAGAGCAATGCAGGCCTTATTACAGATTCAGCAGGGTTTACAGACCTTAGCAACTGAAGCCCCCGGCCTCATCCCAGGGTTTACTCCTGGCCTGGGGGCATTAGGAAGTACTGGAGGCTCTTCAGGAACCAATGGCTCTACTTCTACATCTAGCGAAAACCCAAGTCCCACAGTAGGAACCACCGAACCTGGACACCAGCAGTTTATCCAGCAAATGCTGCAGGCTCTTGCTGGAGTGAATCCTCAGCTACAGAATCCAGAAGTTAGATTTCAGCAGCAACTGGAACAGCTCAGTGCAATGGGATTTTTGAACCGTGAAGCAAACTTGCAAGCGCTAATAGCCACAGGAGGGGATATCAATGCGGCTATTGAAAGGTTACTGGGCTCTCAGCCATCATAGCAGCATTTCTGTATCTTGAAAAAAATGTAATTTATTTTTGATAACGGCTCTTAAATCTTTAAAATACCCGCTTTATTTCATTTTGACTCTTGGAATTCTGTGCTGTTATAAACAAACCCAATATATGATACATTTTAAGGTGGAGTGCAGTAAGATGTGTGGGTTTCACTGTGTTTGTTTGTTTTTTGTTTTCCTGGAACAGTGGGAATCAATGCTTTTTCATTTAAGGCTACTGCATGCGTCAAACACTTCTGCATTTATTGTAATTTTTAAAAAACATATCACCTTTTATAGTTGGGTGAACAGATTTTTGTCCTGCATCTGTCCAGTTTATTTGCTTTTTAAACATTAGTCTCTGGTAGTAATTTATGTAGAATAAAAGCATTAAAAAGAAGCAAATCATTTGCGCTTTATAATTTGTGATACAACATTGCTTATCGTGACTTTGGCATGTATTTTTGCAAACAAAAATGCTGTAAGATTTATACTACTGACAGTTTTTGCTTTATTTGTATACAATGTATGTATGCACATTTGGGACAGCATCTCTAGAAACATACTACAGTAGATCATCTGAGCAAAATATCTGTAATGGAAAAAATAAAGATAAGGAAATACTTCAAAGCAGAGTATTTCTTAATTGTGTAGAATCTTACAGCATCTTTGATGAACATCTCAGCAAAAGTACTGGTTAGTGAGGCTTGTTGAAAATACAGTAGAAAAACTGATTCTGGATGTCTCTTTAAGGACGTATTAATTGTACAGACAAGATGATGTAACACTGTCTCAGCATTCACAGATTGACTGTAAATTACCTTAATCTTTGTGCAGACTGAAGGAGCACTGTAGTATAACCCCAAAGTGCATTTGCCTAGGACTTTCAGCTTCTCCCATAGGTAGTTTAACAGGCATTACAATTTGTAATTGAAATGTTGCTTTCACTGAAAGTGTCTTGATGTTTCAGTTATTTTTAATCGCCATATAAAAATAGAACTATCTTCGGGATTTATCAGTTTTCTCATGCGCAGGCAATACACGAATTTAAAATGATTTGTGAGCCACTTGTTTCTGAAGTGTTTTGGTAGTTCTATTAAGAAATAGTTAAATATTGTGCTTTTCAGAGCCTGAGAGAAGGGGAATTTTGGGGGTGGGGTGGGGTTCTGTCCTGGATTGGGCCAGCCTAAATAATACTGGCAACCAAGATTCTGTTAGGATTTCTGTGCATATAGTGTAGTAAAGAAGTATCATTCAGGGGTGAAAACAAAGAGCCGTTTTAACAATGTTGAGTACATTTGGCTGTTCTACAGCTTTTTTCTTCCTTCCCCAAGGAAATTCTGTTTGCCTAACTCTCAAACTATTGGGGTGGTACATTCCTTTAGGACCAATTAAAACCTAACTTTGGGGTCAGTAATATATTTGGCTGACTCGGGTTCAGTATTCTCTTAGGTCATTATATTCTCTCATGTACAGTTAAGGGAAATTAAAATGTTAAAGTAACTAAAATTAATTCAGACCAGTAAAATCAAGGGAAATATAAGTTGAATTCCATTACTTCTGTAAGTTGCTTGCTATTAAAAAGGTGAAGAGGCAGGTTGCCCACCATTTCGTGCACTGTTTTGACACTGTCCCCTGGAATAAAACAGGTACAAAGGTTAATTAAGATGGAGGCATGACTAAGAGGAACTTGTTAAGGATGATATTTGTGTGTCTCTGCTCTCTCTGCCTTATGCCTCAGTATGGTTTTAAAACTTTTGTACTAGCAATTGGTGGTATACAGTGTGGGGTAGTGTCATAACCAGTTTGACAATTTATTAATCACAAAATAACAATAAATCTCTAGCTTTTACACCTGTTTGTCTTGCCTTTTTTGTAGAAAGAAAAAGATGTCTTCAATTTACTTTGAGTAATCATGTCTTTTAAAGACTACTGGAATTGATTGACCCCCAGATTTTCCTACACTTGAGATTATTTTTCATTAATTTTTTTGTTTCCTCAGTTAAATTCTGTGTGTATATACTATATTGTGTGTTAGAAAGAGAACCAACTGGGACATCAGGTAACTTGGGCTTTTGCTTGCTCTTTTTGGTTCTTGACTATTATTTGGAGTCAGGGCATCATGACTGAAAGTGGTGGTGAGGCCTGTGTGAGGCCTGATTCTTTAGAATCACCCACCTAGGTGATTCTAAAGAACCTTTTAGTTGTCGCCCTGGTGTGATTTTTTGTTGCTGTTTGTTTCTGATATGTTCATCTTAGATTTGAATATCTTTTAAGGAGTTTAAGATACTTAAAATTCTCCAAAGCCTTAAACAAAAAAACCCTCC EMBV3_21300 AAAGGAGATGCTTCTTCTTGAAAAAGAAGTATGCAAAGCCCAGAACAACGCCACCCAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17413 CTCAGTAAAATTCAGGTGCAGGCAGATGAGTGGGTGTGAGGCTTTGAAATGGGATTCAGG Gene BVV0102_166986 + 0 NULL GK000019.2:43812246-43813980 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093984 TCONS_00093991 TCONS_00093985 TCONS_00093989 TCONS_00093986 TCONS_00093983 TCONS_00093992 TCONS_00093988 TCONS_00093981 TCONS_00093982 1 XLOC_057317 Coding TCONS_00093984 XLOC_057317 Coding Coding NBR1 19:43785293-43813812 j TSS70391 4102 2 TCONS_00093984_2 378 19 0.85682726698927 0.0218305851469273 0.0136065181254353 0.0128433003717784 0.00757187375700222 0.0113595387275563 0.0045983487485801 0.00611770456479569 0.0106205970225848 0.0111099085637035 0.00105737088949967 0.000515210409061375 0.000385596893805898 1.65422668857089e-69 0.000605174563870617 0.000115498229083438 0.00635052040736291 7.67644694837803e-24 0.00712866661146721 0.00754717275665915 0.0129481131446546 0.00443679492556617 0.000961444570376363 0.00010993078532028 0.00285710031958167 0.017108636732821 0.0128709105044253 0.00842915351131125 0.000680055565767672 0.000303211381434899 0.00188698682930721 XM_005220724.1 NBR1 PREDICTED: Bos taurus neighbor of BRCA1 gene 1 (NBR1), transcript 0.0 5032 99.96 0.680643588493418 NM_031862.2 NBR1 Homo sapiens neighbor of BRCA1 gene 1 (NBR1), transcript variant 3, 0.0 2163 78.88 0.601901511457825 TCONS_00093984_2 sp|Q14596|NBR1_HUMAN NBR1_HUMAN Next to BRCA1 gene 1 protein; 0.0 675 88.86 0.968253968253968 2 coding 1 1 1 1 0.0129930197834235 0.949501481247051 0.0123913276263675 0.836399069042241 AGATAACCTGGGGACTGGGCCCTGTCTCTGTCCGCCATGTTAGATTCACTCCGCAGGGGATAGCAGGAGAGCTGGCAGCGTAAGGTTCTTGCATTGGCCTTCGGCAGGCGCCCCCCGGGGGCGGAAAGCTGCCCACAACATGGAACCACAGGTTACACTAAATGTGACTTTTAAAAATGAAACTCAAAGCTTTCTAGTTTCTGACCCAGAAAATACAACTTGGGCTGATGTGGAAGCTATGGTAAAAGTTTCGTTTGATCTGAACACTGTTCAAATAAAATATTTGGATGAGGAAAATGAAGAGGTATCCATCAACAGTCAAGGAGAATATGAAGAAGCACTTAAGATGGCAGTTAAGCAGGGAAACCAGCTGCAGATGCAAGTCCATGAAGGGTGTCGTGTTGGCGAAGAAGCCCCACCTCCCACTGGAACAGAAAAACGACTAGTTGCTAGGACAGGAAAGAAGCCACTTGCACATTATTCTTCAGTGGTGAGAGTCTTGGGGTCAGACATGAAGACCCCAGAGGATCCTGCAACGCAGCTTCCACCTGCTCCACATAATCCAGACCAGCCTCAAGACAAGCCCCCTGACTGGTTCACAAGCTACCTAGAGACATTCAGAGAGCAAGTGGTTAAAGAAACGGTTGAAAAGCTTGAACAGAAATTACATGAGAAGCTTGTCCTCCAGCATCCATCCTTAGGTTCGTGTCCCTCAGAAGTTTCAATGCCTGTTTCAGAGGAAACACTGTTTTTGCCAGAAAACCAGTTCAGCTGGCATATTGCTTGTAGCAGCTGCCAAAGGAGTATCGTGGGTGTGCGCTACCAGTGCAGCCTCTGCCCATCCTACAATATCTGCGAAGATTGTGAATCAGGGCCGTATGCCCATGACTCCAATCATGTCCTGCTGAAGTTGCGGAGACCTGTTGTGGGTTCTTCTGAACCGTTTTCTCACTCGAGGTTCTCTACTCCTCGTCTTCCTGCTGCTCTGGAACAGGCCAGGCTCCAGAAGCAAGTTGATAAGAACTTTCTTAAAGCAGAAAAGCAAAGGTTGCGAGCTGAGAAGAAACAGCGTAAAGCAGAGGTCAAGGAACTTAAAAAGCAGCTTAAACTCCACAGGAAGATTCATCTATGGAATTCGCTTCATGGGCTGCAGAACCCCAAATCTCCTTTGGGTCGACCCGAGAGCCTGCTGCAGTCAAACACCCCGATGCTCCCTCTGCAACCCTGTGCCCCAGTTATAGAAGCCAGGCTTGGGGCAGATACAGGAAGAAAGTGAAGGGGCGGGATTTAAAGCACTTCCTGATTCCACAGTGTCAGTAAAGAAAAAGGCTGAGAACGTTTCTTCCATGGAGGAACCAGAAGATGATTTGAGTGGGACCCAGTTCGTGTGTGAGACTGTCATCCGATCCCTTACGTTGGATGCCGCCCCGGATCACAAACCACCTTGGAGACAGAAGTCCCCGCAGAGGGCTGAATTACAGCTGTACGCCACAGAGGAACAGCAGCCAACTGTGCTGCCTGGGTTCTGCAGTAAGGAGTCTTCGTTGAAATTTGCCTCACCTGAAGAGGGACCACTTGCAGACGAGAGGGAGGAGATTGTCCAAATTGCTGAAGAAGAGGCTATTGTGGAGGAAGAGGATGAGCTCAAAGATGAAGTTCGGAGTCAGTCCTCTGCTTCTTCAGAGGACTATATCATCATCCTGCCTGAGTGCTTTGACACCAGCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGCTCTCACAGCCAGGCCTGGAGCGAGGGGCTGAAGGAGAGCCTGGGATTGAGGCTGGGCAGGAACCAGTTGAGGCTGGGGAGAGACCCCTTGGAGGGGACAACCAGCCACAGGGGCACAACATCAATGACATCCTTATGACCTCACAGACTCTGGACACAGTGCCCCTAACCCCAGAGGTGGTGGGGCTTCCACCACAGCTGCCCAGGAGTCCTCCCAGTGCACAGCATCATGGTTCCCCAGGAGTGGATTTACCAGTTACCGCACCAGAAGTTTCTTCAGTCCCTGGTCAGATCAGAGAAGAGCTCAGAGGCCCCTCAGGACTTGTAAACAGCAGACCGAAGAGCTATGACCACTCAAGGCACCACCACCACCATCACGGGAACAGCATTGCTGGAGGACTGGTAAAGGGGGCTTTGTCTGTTGCTGCCTCTGCATACAAGGCCTTGTTTGCTGGACCACCAGTCACCGCACAGCCAATAGTTTCTGAAGATCAGACAGCAGCCCTGATGGCCCATCTCTTTGAAATGGGATTCTGTGACAGGCAGTTGAACCTAAGGCTGCTGAAGAAACACAATTACAACATCCTGCAGGTGGTGACAGAACTCCTTCAGGTCAACAACAACGACTGGTACAGCCACCGCTACTGAGGAGTGGCCTCGTATTAAATAACTTTGCCTGCTGCTCAGAGATGATCTTTATTCTGTTGGGGCATGGGGTAGAGAGCCTTGCTTATTTTTTAATCTGATGAATCTATAATAGAGCCCATCATTGAACTATCCAGACAGTACCTGCCATTGCAGTATTTTTTGGAGCAAATCAAAAACCAGAACTTAAATTTTCACAGTAGACATTAGGTGAATTGTAGGAAGAGCATTTTTCAGTTGATTTGGATAAAGCTCCTTTCTCTGTTTTAGTGCACTGAAGAGTATAACTTAAACTTCCTATAGAACCATTTTTCTTTCTGCTTGTACTGAAGTTGAGTATTTTTCTTTGCTTAACGTGGATGTTTTTATGGGGATATCTGTTGTCAGTTTTTAAAAGGAATTAACCTTGGAAGTTGTTTTCCAGAATTATTCTCATAATTTCTCTAACCTATCCCAAGCTTAAATAGCTATGTGGTATTAAAATGACACCTAGAACGTGATAGGAATTTTGTTACTCTTCCCGTTTCAAGTAGAAAGTCATTTCTCTGCAAGTCTCGGAAATCAGCACTGTTGTTTTCTAAAGACCCCACTGATGCGTTGAAGTATATCCACCTTCCACGTCTCTGCACTTCTGAGTAAGGAGCGGGGAGTGTGCTAATTAACCCACCAGCACCTGTTGAACAGTGTCTGTTGTAGCAATTTTGCATACATTTGTATTTTATTTAAGGGAAAAAATTTAGGTAGTGTGAAATATTTTGCTAATCCTATAAAGAAGGAAAGAAAACTCTTCTATTAAAGGAAAAAGTAAATTTAACAGTTACCTTTTTTCTTTATGTCAGGGGGTAGGTCTTATTTACAGTAGAGTGGGCAAGGGCTGTATAGAAACATGAGAAAACTGAACTTTATTATGTGAATCTCAGTAAAATTCAGGTGCAGGCAGATGAGTGGGTGTGAGGCTTTGAAATGGGATTCAGGAAGTCCTGAATGTCTCTTGAATGTTTGAAATCTGTTCAAGAGAACTTAGAACAAGAAAAAGAGGCTGTTTTACAAAACTTGGATGGGGAGCAAACTCACAGAAAAAAGTTTTGGTTTAATTTAACCCCAGGGTGAGTGGGGAAAGAGCTTGCTTACAAAGGTCCAAAGTCCTCACTCTGGTTATAGAAAGGAGTCTTGGGTACAGCTGGTAAAGAGATAACAAAAAACACTAAAGATTTTAGTCATAAAAACTGCTTGCAGAAAAAGAAGAAATCTGACCCCCCTCCCCCCCCCCCCCCCGCCCCAGCCCGAAGGGGGAAGGATAATAGTATTATATAACCTGGTTGGTATTACAATGAATGATGATGTAATCATTAGCCATAATGATGTTTATTTACAGTATAACTCTTGAATGCTATTAAATAGGCCAGGATTCAGACTGCAAGCCAACCAGGCTGTTCGTTATTTAAAACGTTTTTATGGAGCCTTCTGGGTAGAGGCTGAGCGGCCGGTTGTGTGTAATTAATTGGGGTTGATTTGGGACGGGATCTGTCTTGACCATCTGAGTCGTATTGTAAGGGTCCAGTCGTCTGTCCCATTGTACTTGTACGTAACCGCTTAAAGAATGGTGAAATAAACTTTGAAACTCTTACCTGCCCTGGCTGGTACCTTCGTCCAGGACCTCGCGTGGTCCTTGAAGAGCTGAGAAACGTTCTGGCCGCTGT EMBV3_14054 GTGAAACTTTTAGCAGAGAGCCAGTCACGTTACACGTAGCAGAGTTGGAAGATCCGCCTG Gene GeneID:534614|CCDC158:XM_002688358:164_cdna Constitutive 0 NULL GeneID:534614 6 GENE CCDC158 NULL coiled-coil domain containing 158 EMBV3_40794 AGAACCAAGTCACTCCACAGGACCATGAGAAGGCTGCTTTGATTATGCAGGTACTTCAAC Gene GeneID:282588|CSTF2:NM_174685:2_cdna Constitutive 0 NULL GeneID:282588 X GENE CSTF2 CSFT64 MGC142429 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa EMBV3_18249 AGCCTCCATTTTCCAGAGTGAGGCGGGATCAGGGACAGCATTGGGTGAGATGTGCTTTAA Gene GeneID:508710|MPP3:NM_001103235:218_cdna UTR3_Alt 3 NULL GeneID:508710 19 GENE MPP3 MGC157331 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) EMBV3_15243 AACAAGATAACAGAGCCCACTTGTGTTCAGCTACACGCTGGGAGAGAATGCAAACCCCAG Gene BVT0102_288056 + 0 NULL GK000013.2:15676673-15984585 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044512 TCONS_00044515 TCONS_00044513 TCONS_00044514 TCONS_00044519 TCONS_00044510 TCONS_00044517 TCONS_00044511 TCONS_00044516 TCONS_00044520 TCONS_00044518 1 XLOC_026223 Coding TCONS_00044519 XLOC_026223 Coding Coding GATA3 13:15981746-16003620 j TSS32719 5121 1 TCONS_00044519_3 444 6 0.766150048004389 4.29332038964222e-144 1.92738127673885e-69 9.6715181664998e-08 9.81350946176219e-16 1.72974864913026e-21 2.34021890926845e-111 3.28560763975436e-51 3.91523448609127e-26 3.48623337744801e-22 1.85863512224382e-06 1.27228224180709e-13 1.18789249568106e-17 1.45003342838559e-06 9.84750757905178e-23 6.25561940702751e-06 0.00303591454569882 0.00250455181966654 0.00286315486029104 1.75812785745616e-141 3.52279054827459e-152 3.96627495736807e-111 0.000591427052064356 0.000229905358334017 0.000700569449803331 3.94856018139105e-111 1.82418753639131e-96 1.18801895708784e-164 1.05435592888247e-05 3.08911385191656e-05 7.56736703940789e-05 XM_005214124.1 GATA3 PREDICTED: Bos taurus GATA binding protein 3 (GATA3), transcript 0.0 6985 100.00 0.75610232376489 NM_001002295.1 GATA3 Homo sapiens GATA binding protein 3 (GATA3), transcript variant 1, 0.0 3393 84.26 0.614723686779926 TCONS_00044519_3 sp|Q08DV0|GATA3_BOVIN GATA3_BOVIN Trans-acting T-cell-specific transcription factor GATA-3; 0.0 852 99.77 0.997747747747748 1 coding 0 0 0 0 -0.0999542223183997 0.554948238358419 0.00265280748046033 0.957624346403133 CCCCGGCGGCGCGGATGACACTAGAACCTCCTTAAGTTCCGTCGCGCCACAGCTGTCTGCGAACACTGAGCTGCCTGGCGCCGTCTTGATACTTTCAGAAAGAATGCATTCCCTGTAAAAAAAAAAAAAAAAAAAAAATAGGGAGAGAGAGAGGAAAAGAGAGAGAGAGGGACGGCGAGCGCGCGAGGCAGAGCGAGCCACGCAATCTGACCGGGCAGTTTCTGCTCTCCCGGTCGCACGCCTCCTTCTCTTCCTCTCTGCTCCTCGCTACCCAGGTGGCCCAGAAAGACTCAGTCTTGGAGCCGCCGAGGAGCCCCCGGTGAACAGGAGCCTCACTTGCAGAATTCTAGCCAGTCCTCGCTTCCCTTTTACAATTTGGCCCGTTTTTGTCCTCCCGTACCTAATTTTGGGAATTTCTTTTTTTTTTTCTTCCTCTTCTTCTCTTTGCTAAACTACCCCGCAAAGATTTATTTTTTTAAAAAAATCTCACTTACTCACCTTTCCTTCCCTGCTTTCCCATTCCCCCACTGAAAACAAATCCTTAAACGACCCCCGCCCCTCCGACGGCAGGAGCACCTGCGGAGCCTCGGAGCCCCCAACCGCCCTCTCTCTCCGCGCGCGGGTTCCGGGCCCGGCGAGAGGGCGCGAGCGCAGCCGGGGCCATGGAGGTGACGGCGGACCAGCCTCGCTGGGTGAGCCATCACCACCCCGCGGTCCTCAACGGGCAGCACCCGGACACTCACCACCCGGGCCTCGGCCACTCCTACATGGACCCGGCGCAGTACCCTCTGCCCGAGGAGGTGGATGTACTTTTTAACATCGACGGTCAAGGCAACCACGTCCCGTCCTACTACGGAAACTCGGTGAGGGCCACTGTGCAGAGGTATCCTCCGACCCACCATGGGAGCCAGGTGTGCCGGCCACCTCTGCTGCACGGATCCCTGCCCTGGCTGGATGGTGGCAAAGCCCTGGGCAGCCATCACACCGCTTCGCCCTGGAACCTCAGCCCCTTCTCCAAGACGTCCATCCACCACGGCTCCCCGGGGCCCCTGTCGGTCTACCCGCCGGCCTCGTCCTCCTCCCTGTCGGCGGGGCACTCCAGCCCACACCTCTTCACCTTCCCGCCCACCCCGCCGAAGGACGTCTCCCCGGACCCATCCCTGTCCACCCCGGGCTCCGCCGGCTCCGGCCGCCAGGACGAGAAGGAGTGCATCAAGTACCAGGTGCCGCTGCCCGACAGCATGAAGCTGGAGTCGGCACACCCCCGCGGCAGCATGGCCACCCTGGGAGGGGCGGCGGCCTCGGCCCACCACCCCATCACCACCTACCCACCATACGTCCCCGAGTACAGCTCTGGACTCTTCCCGCCCAGCAGCCTCCTTGGGGGCTCCCCCACCGGCTTCGGGTGCAAGTCGAGGCCCAAGGCGAGATCCAGCACAGAAGGCCGGGAGTGTGTGAACTGTGGGGCGACATCCACCCCTCTCTGGCGACGAGACGGAACCGGGCATTACCTGTGTAACGCCTGCGGGCTCTACCACAAGATGAACGGACAGAACCGGCCCCTCATCAAGCCCAAGCGAAGGCTGTCGGCAGCAAGAAGGGCAGGTACGTCCTGTGCAAACTGTCAAACCACAACTACGACTCTGTGGAGAAGAAATGCCAATGGAGACCCTGTCTGCAATGCCTGTGGGCTCTACTATAAGCTGCACAATATTAACAGACCCCTGACTATGAAGAAGGAAGGGATCCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAAAAGGTGCACGATGCGCTGGAGGACTTCCCCAAGAGCAGCTCGTTCAACCCCGCCGCCCTCTCCAGACACATGTCTTCGCTTAGTCACATCTCGCCCTTCAGCCACTCCAGCCACATGCTGACCACGCCCACACCGATGCACCCGCCGTCCAGCCTCTCCTTCGGACCTCACCACCCTTCCAGTATGGTCACCGCCATGGGCTAGGGTCCCTGCTCGAGCACCGCTCACAGGGCTCCAGGCGAGAGTCTCTCCGGCCCCCCTTCTACATGCATTTTCGCAGGAGCAGTATCATGAAACCGAAACCCGATGGATCTGTGTGTTTTTGCAGGCATCAAGCAACCTGATGTTGTGGCCACTCGGACGACGCAGCCTTCCGTGGTGTCTGTGTTCTCACTCCCCGAATCTGGATCCCATTTGTGAATAAGCCATTCAGACTCACATTCCCTATTGAACAGGGTCTCTCTAGTGCTGTGAAAAAAAAAAAAAAAAAAGTCACCAAACATTGCATATAACTTATATTGTAAGAAATACTGTGCATTGAAAGAAGAAGACTTGATTGCCTCTCGGTCGCTGTCAGGAAGGCATGGAGGACGCCATACCTTTGAAGGACGATGTGGGGAAAATAAAGAGTGGCGATTAAGAATAAACTAGGTCTGATATCCAAATGGACAAACTGCCAGTTTTGTTTCCTTTTCCTGGTTACAGTCGTTTGATGCATTAAAAGAAAAAAAAAAAAGGAAAAAAAAAAAGAAAAAATTTGTAGGCAAATCATTTGTTCAAAGCTGTGGGCCTCTGCATAGGAAATTCTACTACTCTGGGCAACGTGTTCCACTCTCAGGTTGCCCTGGAGGGTTCAACTAGACTTTCCTGGGCCTTCATGCTTTGTGAACATGTCCCTGTAATTGTTGTTTGTATGTATAATTCAAAGCACCAAAATAAGAAAAGTTGTAGATTTATTTCATCATATTATACAGACTGAATTGTTGTATAAATTTATTTCCTGCTAGTGTTAAGTACTGCTTTTTTTTTTTTTTTGGTTTTTTTGTTTCTATTTTAATATTTTCTTCTTCTCTCCATTTTTGGTTGAAAAAACTGGGTGACATTCAGTTGACCTAAGGTGGTTGTGCTCCACGGGGTTGATTTTTTTTTTTTTTTCCATTTTGTTTCTCGATGATATTTATTAAATAGCTTCTAAGGGTACAAGAGCATATGTCCTTTGTCACTTCTCCCGCAGCCTGTGCTATGAGGGTAGCAGTGTATGAGCTACCCGCGTGCATGTCGGCGGCTCAGGCCCGCCAGCCCTGGGTCCTGAGAGCAGCCTGGCTGAATGTTAGCGCCTACTGTGTTCTGTGTTAGTGATCACTGCCTTTCATGCAGTCTGTTGGAATAATAATATAAAGAAATAATAAAGTGAAAATATTTAAGAAACAACCAAATAACATCATATTAAGAGTGGTGGCCAAGCTCTTCTAGAATCTGGTAGCTCTAGCTAATTGAAGCAAAAGGAGTTTAAACAAGATAACAGAGCCCACTTGTGTTCAGCTACACGCTGGGAGAGAATGCAAACCCCAGACAGGAACATCGATGTGTTTGGGAAACTGGGCATCTTGGGAGCTCGCGATGCAGCCCAGAGGAAGGCATCCCCGGGGCTGGAGGAAGTTCTGTGGTCCGCTCTTGAGTTGCTCTTCTCTCCTCCTGGTCTGGCCTTGAGGAGATTTTCTCGCCAGAGAAATGGGAGGATTTCCTTGTTGAGATTCTCAGGCGGGCAGGTTGCAGCTGAGATTCCTCATGGTTCTCTGCAAGATGGAGAGGAGCTGGGCTGGGTCTTGAAATTATGTCTGTTTTGCTTTTCTACTGTTGAATCACACCACAGTGAAGGGTGGATTGGAATGTTTGCGAAACATGAAATAACCGTTTTGTAACTTACGCTGTACAGTTTCCTTTGACTCTGTTGACAGAATGTGTAACCCTGGCACACATTTGAATTAATGTCTGTTAATTGCCTCTCTGCTTTCTTAGCAAATATTTCAAAGCTAAAGCTCAATGTTGAAATAAAGAAGTAGAGAATTACTGACACGCACGTGAGGATCTGCCTGGCTCCTAATTCGGACGTGGTTTCCCGTGACTCCTGAAGCACCCAAGGCCGTGGGCCGTGGCCGTCTGTTGCCATCGTAAACTTGGGAGCAGTTGTGGCTGGAGAGTTCCAGTGTCTCAGGGTTTGCCACTTTTTCCCTCCGTACAGATTTGAGCTGATGCCCTTTCACCTTAAGAACAGGGAGTTCAAATTCTTGACATTCTTGGGGGTGGGAGAAGGGCAGGCGAGAGTGGGGGGCACACATAGAAAATTCCCAAACTCAACAATCCAGTTACATTTTGTTTTAGGTGCTGCAGCCATAAAGGCACATTGGTTCCTCTTCCTTTTTCAGAGAAACATCATTTTATCATTCAATACCTGGATTTAACATTCTAAGATAGTTCTGGAAGATGATGCAGAAGATTTAAAAAAACTATATTCTCCAGTTTCTTGATCAGAATGTTATCATCTGTTTTCATAGTTTTTAATTATTTTGTTCTTTCTTTTCTTCACTTAAAAAAGACACACTAGAACAGTGACCCTGAGAGGGGGTTTCTTCTAGAAAAACAGAACAAGATTGTAGATCTAAAATCCTGCTCCAATATTCTTGAATAAACTGTGCCCCTGATTAATTTTCCATCTGTTTCTCCCTCTCTTTTGAAATGGTTGCGCTTAGCTCATCCATGGGAATATATGGGCACGTTTGGATTATTTCTTGAAAACATTTTCAGAGCCAACACAAGACAAAAAAGACAAACTGCGTAGTTATTGAAAGATTTTGCTATGTATGAACTCTTCAAACACTGGACGTTCATGATGTAATAAACATTTTGAATGGAAGTACTTCTTTCATTGATTCAGCAGATACCTATTGAAGATCTAGGTTGAAGTCCATTTAAGAGATATTTTAAAAAAAAGCAGTGTAGGAAATAGAGAAACCAAGGTTCCAGTGTCTCAGCCTTATGACATTTACAGGTTATTCCCCTTTGAAACGAATGACGAGCTGTGGTGAGGTTCCTGGCTGGGCCTCGGTGTTGGTCGCCAGGCAGGTAGAAGGCATGACGCAGTGGGAACACCCAGAGTCTGCTTGCTGAGAGCAGTGTCTGTTTTCTAAACCTTTGAAATTAGAATTATTTTTAGTTTAAAAATATTTTTAAAGCTAACTCCTCATCAGGGGACATCATTTTAGGATTTCTTAAGTCTAAAAACTGTTTGAAAGCAGCCAGTTTTCCCCAGGTAGAAAAGGACATCAGA EMBV3_30693 GGAGAGAGCTGGGTAACACTATCCTGAGAAGCACGTTTCACTCTGGGTCTGGGTCCTAAA Gene BVV0102_191979 + 0 NULL GK000022.2:52284690-52369973 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20722 TGTGTACAACATCATCGGGGGGCTTGATGAAGAAGGAAAGGGAGCCGTGTACAGCTTTGA Gene GeneID:514237|PSMB1:NM_001038539:5_cdna Constitutive 1 NULL GeneID:514237 9 GENE PSMB1 MGC133525 proteasome (prosome, macropain) subunit, beta type, 1 EMBV3_20960 GGCACGTACATGAGCATTGGGTATCTGTGGACACATCACTTAGCCTCCCTCTGTTTCATC Gene BVT0102_336052 + 1 EMBV3_31621 GK000015.2:65854402-65996525 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065610 1 XLOC_040329 NonCoding TCONS_00065610 XLOC_040329 NonCoding NonCoding - 15:65888346-65890201 - TSS49353 1855 2 TCONS_00065610_5 86 0.117520215633423 1 0 9.53499559300608e-05 0 0.000104762315741019 0 0.000151708487834856 0.000109914823816556 1.257508901743e-05 4.46393742702042e-05 2.12672825961513e-05 0 0 0 0 0 0 0 0 0 0 1.55071327694702e-05 0.000392763078788189 0 0 0 7.47004510307164e-05 0.00011014470528863 6.3171442741938e-06 0.000124272277886885 2.61703675608021e-06 0 0 noncoding 0 0 0 0 0.0797259655470969 0.522413405008794 0.00832665105670831 0.872917185265746 GTGGTAACATAGTTTTCAGTAAACACTTTTCTGCTTTTGTGCTCCTTCAGGTACTGTGTTCAGAATACAGAGCTCGGTGGCTGGCTCTGGGTGAAGGGTCACTGGCTGGCTATATGCCACACTTTGCCCCACCATAGAGCAGGATTCTGTAACTAGAACTTTGCTCCTGAAATTCTTTTTGGCCCCAGTGATAAGCATCGTGTAAAACTCTAGTAGGCTGGGGTTCAACATGCAGATGATTCTGTCTGAAACTGGTTCAAGGTTGATTGCATGTAATTTTTTCTCTTTCAAATCTCAGGGCTTTGAGGGGAGGGTAGAAAAGCCATTCTTTTTTTGCAGTGTTGTCCATTGCATTCCCAGTAAAAGCCAGTCACAACTTCCAGTTATTGCAACTATGGAAAATACCTATCCCAGTTTCCAAAACCTCCTAGGCGCGCTGCACCATCTTCTGTTGTGAACCACAGGATCAGAGAGCATGTAGGTCATCTTATTTGATGATGGTGTGAAGTTGAGCATAGAACTTTCCCTACTAGGCTAAAAGCTCCATGAAACCTAAACAAACCCATGGTAGGTTTTAGTCTCTATTGTTTTCTGGTGCCTATGACAGGGTTTGACCCTTACTGGATTCTCAAGAGTTATATGCACCCAGCTGATGGAAAGACTGCATAGTATAGCATTCATTTTGCGTAACTTGGTCAAACTGTAAGTGCAGAGTTGTTTTTTTTTTTTTCTTTTTATAAACGAGGGGGATATTTAATTATTTAACAAAGAGTACTCACACAAGTTCTGACCAGTCAGAACTTACCCTGGAGAGTCTGGGGCCCCCTTGCTAGGACAGCACCCTTTAGTTGCTAGTTGATGGGGCAGTCCAGGGGCTGCCAGGAATATGAGTCAGGGAAGCAGGAACAGTCGAGGACAGTGTCTCTTTGTCAAACAAATTTTAACAGCTAGCGAGGCAATACTAGAGTATACGTTAGAAAAGCATCAGAGTGGCTATTGTGTAGAGTGCAGTATAAAGAACATTTTAAGGATTCCCTGGTAGCTATTCATTGACCAAATATTGTGAAATTTCTTTACAAAAGGTTCTTCTCTGACTTGCAGCCTTTCGCCACTTACTTTTTTCCCCCTGAAGTCTCCCTTGCCTTTGCTCAGGGAACGTTGATATTGTTCAAGAAAAGAATGAGAAAGAACACTGGGATTCACCTCGCATGGCATGGGCGTAACTGAGACAGACGCCTGTTTCTCGGGAAGCTGGCCAAGGTTTACTACGCTCACTAACAATGTCTTCTAAGCCCCTTTGCTCTTCCCATTGAAGCTCTAGCCTTTTCTTCAGGTGAGCCCACTTGATTTCTAGTTTCCAGATGTTGGCTGAGCAAGTGACCTGGTGGGAAGGAAGGGATGGTGAATGGCTGTTTGGATTCCAGGAGATCAGGAGACCCGGATTTGAGTCCCGTCTCTTTCCTTACCAAATGGGAAGCAAAGAAAGAAAAGGCACGTACATGAGCATTGGGTATCTGTGGACACATCACTTAGCCTCCCTCTGTTTCATCAACTATCAAATGGGGGCTCTGCCTTGGCTGCTCTTCTCCCAGCCCAGAATCCTTGAGTCCCATCTGCTCTGACATCTCCAGGCATGGGTGGAAGGTTTGTTCCAGCCCACCGCTGTGGCTGCTGGTCACCTCTTTCCTCGCCTGTGTAACTGGACCCCACCCACAGCAACCTGGGATCCATCTCCTCTGCCGTGGGCCACCAGCCCCGGACCTTAGCTCAGAGGGTCTCCTACATGGAACTACAGCCGTAAGGCCCTTCCTCCTCCAGGTCCACCCTCTTCCTCCTCCCCCACTCTCACTCCCTC TCONS_00062172 TCONS_00062173 . 5' 33946 TCONS_00062172 TCONS_00062173 . 5' 33946 EMBV3_38117 GCAACACTAACCCTTTGACTGCTAATGTATGTTTCTGCTTGCTGTGCCTTGTTATGGCTG Gene GeneID:514773|SOCS5:NM_001046182:110_cdna Constitutive 0 NULL GeneID:514773 11 GENE SOCS5 MGC137606 suppressor of cytokine signaling 5 EMBV3_36771 TGGAGACCCTCAGCAACATAGTCTCCTTGGATATCTCTCATATGCATGTGATCAAGAAGT Variant GeneID:618337|LOC618337:XM_002707752:18_cdna 128^229 1 EMBV3_38641 GeneID:618337 18 GENE LOC618337 NULL similar to zinc finger protein 665 EMBV3_41953 CATTGTTGGTACAGGCCCGAGCCACTCCACGGTCACTACTATCACAGGCTCGTTTAGTTA Gene GeneID:100298723|LOC100298723:XR_084148:67_cdna Constitutive 0 NULL GeneID:100298723 X PSEUDO LOC100298723 NULL similar to myotubularin related protein 8 EMBV3_28211 GAGGAGCAAGTGCTGGACCCAGAGGACAAATCGGGACCGAAAGCGGAAGAGATCAAAGAT Gene BVT0102_101002 + 0 NULL GK000025.2:25356559-25519658 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144828 1 XLOC_088661 Coding TCONS_00144828 XLOC_088661 Coding Coding - 25:25356762-25502446 - TSS108652 1580 1 TCONS_00144828_3 517 14 0.989250633224192 0.000108159969701903 2.89870539589919e-43 7.85846844471284e-05 7.79883455116368e-06 3.30511873905019e-13 4.75431150135041e-05 0.000143944790249968 0.000437988057401693 1.23678097669823e-05 0 2.02025783749212e-21 0 5.23262204843399e-12 8.93163557296271e-06 3.01143297324338e-05 0.000244740517194057 0 1.58803254607118e-05 4.53855808628115e-06 9.55793561421257e-05 4.00780597312026e-05 0.000319371569312158 5.22571919059145e-05 2.65965144843876e-05 5.70063860607728e-05 0.00071346430455629 3.0793305070772e-05 0.000158057972900518 0 0 XM_005224817.1 KIAA0556 PREDICTED: Bos taurus KIAA0556 ortholog (KIAA0556), mRNA. 0.0 2850 100.00 0.999367088607595 XM_005255202.1 KIAA0556 PREDICTED: Homo sapiens KIAA0556 (KIAA0556), transcript variant X2, 0.0 1743 84.36 0.999367088607595 TCONS_00144828_3 sp|O60303|K0556_HUMAN K0556_HUMAN Uncharacterized protein KIAA0556; 0.0 685 72.45 0.998065764023211 0 coding 0 0 0 0 -0.0713206939655256 0.528129832300906 -0.00657341167972102 0.892297590601901 GAGCTCCCGGAACCGCCGCCTCTAGAGATGGACGGTCAGACTCTGCGAAAGGCTGAGAGAAGCCGGTCCTGCTCTCGGGAGAAAAAGGAGGGTTACACTAAGGACATGGTGACAGACTTTGATGAGAAGCACGATGAGTATTTAATATTGCTCCAGCAGAGGAACCGGATATTAAAGCATCTGAAAACCAAGGACCCCGTGCAGTTAAGGCTGGAGCACCTGGAACAGGGCTTCTCAGTCTATGTCAACGGGGCCAACTCTGAACTGAAGACGTCCCCTCGGAAAGCCGTCCACTCCGACTTTTCCAGAAGCGCCTCCCACACCGAGGGGACTCATGATTGTGGACGAAGAACGCTGTTCCGAGAAGCTGAAGAAGCTTTGAGACGCAGTGCACGGACAGCTCCCAGCAAAGTCCAGCGCCGAGGATGGCATCAGAAATCTGTGCAGATCAGAACGGAAGCTGGCCCGCGGCTCCACATCCAGCCTCCTCCGGACTATTCTGAAGACTCTGAGCCATGTGGGGGTGTGACTGTCAAGGTGAAGGATGCTTCTGGGGACCGTCCACAGGATACCAAATCTCCCACCAGCACCACGCCCTGTGATTTTAATTTCTCCCTTCCGAACGCAAAAGGACGCCCTGACCCTCCAAGCAGTACGGACAGAGAAAGGATCCTCTTAACTATTCAGGATGTGATGGAGCTAAGAAAAAGCCTGGAACTTAGTGTCAATCTACAAAGGAAAGAAAAGGATGGTTCCAGTGATGAGTATGACTCTATCGAAGAAGATGTACTCCCTGAGCCGGACCCCGAGGACCAGGTGCTGGTGGGCTGTCCCAGAGATGACTCCCCTCTTTCCCAAAGGGACTCAGTGCAAAAAGATGCTCCCAAGGACCAGGAGACAGAAGAACGCCCTCCCCAGGGCCCAGACACCCTCATAGTGCTGGAATTTAACCCGACTTCCAAAAGTAATAAAAAGGAAAGGAATTTGTCTGCTAAGCGGAAGGACAACGCTGAGGTCTTCATTCCCAGCAAACCTGAGCCACACCCGAGTCCCCAGCCCCCAACCATGTTCCCGGATCAAGACAGGGCGTGCTCAAGACCCGGGAGCCGCCGAGAGAGACCCCTATCCGCAACCCGGAAACCAGTGCGCGAGGATGAGGACCGAGAGGAAGATGCCTCGGCTGTGCTGAGAGCCATCCAGGTGGAGAACGAGGCCCTGCAGAGGGCGATCCTCAGCAGAAAGTCTGAGCCCCCCACCAGCCCACCGCAGGACACAGAGGGACCACGAGCAAAGTCCTGGACCAGTCTGCTCAAGGAGGAGGCCCCTGAGCTGCCTCCCATCACCACAGTGACCAGCACGCAGGAGCCAGCCAGGGCAGCAGGGGGAGCCAGAGCCGTCAGTGAAGCCATCAACAGAATTGGCCTTTTGGGGAGCAGACAACAGCAGAAGCTTCTGAAAGTCCTCCAGGCCATTGAAAGTGACTCCGCCCGTCTCGGCTGGGTTGTTTCACCCACGGAGGAGCAAGTGCTGGACCCAGAGGACAAATCGGGACCGAAAGCGGAAGAGATCAAAGATGCCAT TCONS_00146544 r 5' 129 TCONS_00146544 r 5' 129 EMBV3_04907 GGACCATCTTATTCTCCTGGCTATCATGACCATCACCTTCGCCGTCTGCTCCTTGCCTTT Gene GeneID:282329|PTGER2:NM_174588:41_cdna UTR3_Alt 2 NULL GeneID:282329 10 GENE PTGER2 NULL prostaglandin E receptor 2 (subtype EP2), 53kDa EMBV3_27483 GGGAACTCAGATCTTCGAGTTGCCATTCATAATTTTGCTTCTGCACATAGACGGACTTTG Gene GeneID:512305|CCDC15:XM_002699204:95_cdna Constitutive 0 NULL GeneID:512305 29 GENE CCDC15 NULL similar to coiled-coil domain containing 15 EMBV3_02347 TGAGAACTAAGGTCCACTCTGCTGATTCCACCATCCATCTGGTTCGCCCCCACCTATAGT Gene GeneID:614042|CDC42SE1:NM_001035112:151_cdna UTR3_Alt 2 NULL GeneID:614042 3 GENE CDC42SE1 MGC127300 CDC42 small effector 1 EMBV3_04113 GAGGTGGATTTTTATCAGGTGCCTGGGTTTATTCATCATCCTGTCCTCCTGTGACCAGCC Gene BVV0102_180125 + 0 NULL GK000007.2:64511834-64524923 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213934 1 XLOC_130578 Coding TCONS_00213934 XLOC_130578 Coding Coding GM2A 7:64499095-64513383 = TSS160146 2692 1 TCONS_00213934_2 193 0.141901931649331 4 0.811856932876041 0.000170377663423399 1.80324441787262e-11 0.000329643949680734 8.27844873223059e-05 3.85144350738733e-05 3.33177509652931e-05 0.000107022728375364 1.09857258006152e-05 4.98263238527747e-05 0.000583937250065681 0.000530807230139849 0.000674239174619904 1.25110404451434e-05 0.000239393872401765 0.00013892595561025 0.102640446862628 0.0526321794933753 0.0840354084927214 0.000420878751654871 3.73432710303591e-12 0 0.0527470807565946 0.0385305374704461 0.047203955013809 3.01625045455391e-05 0.000225078121982625 2.27861161062342e-05 0.00955243744138918 0.00625543301887211 0.0100627602705183 NM_001205547.1 GM2A Bos taurus GM2 ganglioside activator (GM2A), mRNA. 0.0 2055 99.91 0.423848439821694 NM_000405.4 GM2A Homo sapiens GM2 ganglioside activator (GM2A), transcript variant 0.0 700 72.17 0.510029717682021 TCONS_00213934_2 sp|Q60648|SAP3_MOUSE SAP3_MOUSE Ganglioside GM2 activator; 3e-87 259 65.36 0.906735751295337 1 coding 0 0 0 0 0.0157163959876164 0.921252827039046 0.0322330764535289 0.558408368625975 TGGCCTCATTCAGCTTTGCATAGCAATGCACAGCTTTGCATAGCAATGCACAGCTTTGCATAACAAACACGGGCAGGTATTTAACAGAGTCGTCGCCTCCACGAAACTGCAGTTAACCAGGCGAGGACCCACCCTTTACGATGAGCCCCCAGTTGCAGGCTCCCTTCCTGGTCTCCCTGGGCTTGCTTCTTGCCGGCCCAGCGCTTCCTGCACGCATTCTCCAGAACCGGCTGGGTAGCTTTTCCTGGAATAACTGCGATGCAGGGAAGGACCCCGCGGTGATCAACAGCCTGACTGTGGAACCTGACCCCATTGCCATTCCGGGGAACTTGACCATCACTGCTGAGGCCAAGACCAGTGCTATCCTCAGTGATCCTCTGAAGGTGGAATTAACTGTGGAGAAGCACATAGCCGGCTTCTGGGTCAAAATCCCATGTGTGGACAACATTGGTAGCTGTACCTATGACAACTTCTGTAATATACTTGAAATGTTAATTCCCATTGAGGAACCCTGCCCGGAACCACTGCACACCTATGGGCTTCCCTGTCACTGTCCCTTCAAAGAAGGCGCCTACTCACTGCCCAAGTCCGACTTCATGCTGCCCGACCTGGAGTTGCCCAGCTGGCTCAGCACGGGGAACTACCGCCTGCAGACCATCCTGAGCAACAGTGCGAAGCGGCTGGCTTGTGTCAATATCTCCGCCTCCCTTAAAGGCAAATAAGGTGGCACCTGCCACTGCAGAATGAAGAGGGTGTGAGGAAGGCATCCTCTTCCTCTGTCTTACGTTGGCCAAGGCCAGATTCTACTCTCTGTCCTTTCTCAAGCCCTTTTCTACAATGATGATGTTCCCCTGCTGAAAGTCATCTTATGCCACTTACAGAGGTTATAACTGTGGGCCAGCAGCCCTGACCTAAGGGAGGATGAGCCTGGTGGTTTTTGACAGCCCAGGACACCTACTGGGGTGGCTGTTGCACTTGCAGCCTCACCTCCATGGCTTTCTCTCTAAAATCTTAACTCATTTTCTAAGGAGGCTAACATGTTTTATGACCCCCACTTTCAGAATGACCCAATCTTGGTCTCCTGAAGTACCTTTATGATTTTTCTCATTGATTTTTTTATGTGTGTCACTGACCTAAAAGCAGAGTGAAAGTACTAACAGTTTTCATTTACTCCCACTCCCTCTTACAAGGAAGGGTCTGAAGGAGTTGATCTAAATCTATTCCTCTATTAACTTCGATCATTTAGTGTTCTTTTTCTAGACTTGCCCAGTTAACAGTGGGGCGTAGCGTATCCTAGAGAGGCAGGGCATGTGGGAGAACAATGGAGAATGTGTATTTAAGGTAGTCTGCAAATTCAGGTGCTTTCAGGGCAAAGCACGGGGCATCCGTGAGTGATGAGGGCCACAAGAAGCATGTTGTTTCCAGGCGTATCTTGCCTTTGTACAACAGCACTGATCTAAGGCAGCTGCTGCCCCATCTCGAGCTGGGGCTCTAATCAGGGATGTGAAATCTGGGCTGAATTAGAAAGGGTACTTGCAGTCTATAGGGGCAGTTGCTGTCCAGCTATTGCCAGTGAGTTCCACAGGAGATTGTGGGCCCAGCATTATGAAATATTCTCAACATTTTCCCCCTCAAGAGGCCAGAAATCCAGACTTTTATATGAAATCCATTTTTAAATATTGAGAGTGAATTTTTTTTTTTTTTTAAACACTGCACAGGCAGAAGGGGCCAAACAGAGTTGTCAGTAGGGAAATCTGGCTCATGGGAGGCCAGTTCGTGGCCTTGGATGTAAGAACACGCATGCCTTGTCCTTTTAACCTTGGGACAACTCCAGCACTGTTTCTCCTTCTGTGGGGCCGAATCCATAGTGCCTGACCCCGTAGGCTCCTCCGATGCTGGGGGAGTGAGGTGGCCGCAGAGCTAAAAGCTCAGGGCCTCCTGCCCTGGCCCAGAGTGCTGTCAGGGTGAGGGAGGCAGCTGAAGAGGTGGCCCCACCAGCAGCCATTCTGTGGAGCAGGGATCCATGATGAGACGTGGATTTTTATCAGGTGCCTGGGTTTATTCATCATCCTGTCCTCCTGTGACCAGCCTCAGGTTCGGGGCTCACGCGAAGCCTGGAATGGTAATAAATCTTTTTGACTTTCTGAGAATTCCTCCTTTGTTGTGGCTGCATATTTTTTCCACTGATCACATCTCAGGGTTTCCAGAGCTCGTTTGCTGGGTTGTTCCTGCTGGAAGAGTTTATAGCAGCCGGACAAGAGCTGAAGCAATGCCAGGGACTGACTCTTCTGTTTCTGGCTTGTGTGCTGCTTAGCGTCTCTGCTTCATTCTGTCCCAGCACCATCCAGCTTCCGTGTGTGTTTGTTTGTTTTTGACCTTCTCCCTCACAGTATGGCCTCTCCAGCCTTTATTTCCTCTCCTGGCTCTTTGGGCATTATTCTCACAGACGTATTTTAGTTCCCATCTTTGCAGGGAAGGACGTTCAGTAGTTTGGTTACTCTTTGTGTATGCTGTGCTTTCGGCTCAGATGCTCCTCCAAGTCTTGTTGAGAGGTGGCGAATGGTGAGAATCTCAAATCCCAGAGCAAAGTGAACTTTTTAACAAATGGTGCTGGGCCAAATGGAAAGCCATTTGGAAAAAAGTTGAAATTGGATCCATACTTGATGCCATAGGAAAGAATAAACTTCAAATG EMBV3_16831 GGCGATGGCGGAGAAGTTCGACCACCTGGAGGGCAGTGCCCCCAGCCTGCCCTCCCCGGC Variant GeneID:614276|MED10:NM_001034756:35_cdna 85^601 1 EMBV3_19065 GeneID:614276 20 GENE MED10 MGC127590 mediator complex subunit 10 EMBV3_26154 GGCCAGGGGTGGTGAGGACCAAGATAGTGGTTTCACTCTACCTTTTCTGGTACGTTTTGA Gene BVT0102_170036 - 1 EMBV3_35112 GK000017.2:63007319-63254161 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075820 1 XLOC_046658 NonCoding TCONS_00075820 XLOC_046658 NonCoding NonCoding - 17:63164853-63172092 - TSS57061 2526 1 TCONS_00075820_1 146 0.406175771971496 4 0.651561204752694 0.000161587800159747 9.94500932269967e-05 0.000205156627189202 0.00022026093445763 5.27726908279232e-05 0.000253481054198949 9.58099161226286e-05 7.02460118519756e-06 0.000235048577958296 0 9.0624935711376e-07 0 1.13589936777191e-06 4.65557531461383e-05 3.88456074351674e-06 0 0 0 0.000616029771841855 0.000192170087880778 3.12466484127419e-05 0 0 0 0.000992916831458929 0.000108778053088971 0.00011713663648535 0 9.6092716239417e-07 0 XR_228327.1 LOC101907408 PREDICTED: Bos taurus uncharacterized LOC101907408 (LOC101907408), 0.0 1308 100.00 0.286619160728424 0 noncoding TCTCCTTTTAATTTAATTTTATTTTTTTCCTTTCATTTTTGGCCCTGCCACTTGGCAAGTGGGCTCTTATTAATTCCCCTACCAGGGATCGCTCTTATTAATTCCCCTACCTGTGCCCCGAGCACTGGGAGTGTGGGGTCTTAACCACTGGACCCCCAGGGAAGCCCCTCTCATCCCCTTTTCAGTTAGCTCACTAGTCTCTTTCCTACTAGTCTTCTCCACTACCACCACCACCACCCCCTCCTTCCCCAGGTTTCTGTCTCCATCTCCCATTTCCTTCAGTTTCTAAAATTATTAGTGCTGAGCCTGGAAGAGTTTCCAGCTGATCCTTACACCCTGGAGAAGATTGCATTTAAGTTACTCCCACCACCACCATCTCCGCCTCCAGTTCCTGCAGGCCTGGGCAGGGGAAACTGAGGCCAGTAGAGGTTGCCCAACTGCCCTCCCCCCCAACTCTGCAGTCTCTCCCAGCCCCCACCCAGCTGCCAGGAATGGGACCACCCATGAGTACAGAACAGAAAAAAAGGGTCCTTTGTTCCAGGAGATGCTAGAGACCCAGCTGAGAAGAGAATGAACTTGCAAACTTGATTCAACCACAGGCCTTGTGCCGTGACCAATAAAGGATGCTCCTGCAAGCAGCTCCCCAGCTCTCCCCAGACCTGCCACCACCACCTCCATCATCTCCACCTGCCAGTCTGCCTGACTCCATCTGCAGAGGAGAGACACGGCTGGAAACTGAGAGAGGAGGCTTCACAGGGCCCCACTGCCTGGACCACGGGCGCTGGGTTAGAGCAAGGCAGCCCTTCATCATTTCTAGCAAACTCCGTTTCCTACTTGGCAGGGGGCACTGCTCCTCTCTGGGCACCTTGGAGTCTCCTGCCTTCCAGGAAAAACATCAGGGAAACCTTGGGTCACCTCGCTTGGCTGACATCACCCATCTAGACCTCATCCAGTCCCAGGTCCCGCAAAAACAAAAGCCGTTGGACCTCAAAGGGTTGCCCTTCTTTCAGCCAGAATACCTCTCGAAAATGATCTTCTTGATGAGAGAGATCTCTCTGTGCTGAGGTGGGCAGATAAATTAAGTTAAAAAATGGAAAATATCAACACACTGCTCAATCCAGCTCCGCGTTTTATTTTTTGGCCGCTCCACACAGCATGGGGGATCTTAGTTCCCCAGCCAGGGATCGAACCCACACCCCCTGCACTGGAAACTTGGAGTAGTTCTGACCATTGGACTTCCAGGAAATCCACCCCCTCTCCAACCTACTTTTTAAAAATACACACTTTAAAAAAAGAAAAAGCTGTCAGAATATTAGCCAAAAGCATTCCCTTTGGTTATGTCTGAGGGTGGGATGACAGAGGACATTCTATGCTCCATGTTTCTACGATGTTTTCATTGAAGGATTGCTTATGTAGTCAGGAATAACAGAGTGTTTGAAAAGGGGAATGGCGAGGGGTTCTTGGGGTCCTTGATGTCTTGAGAAGCCAGGTGGGTTGACAGGCAGGATTCTAGAACAGTTCATTCAAGAGTCTGAGAGACCACTTTCCCCAGGTTGGGGAAATTTCAGCCTTTGGTCCAGGACTGAGTCATCCTGAAGCAGAAAGGAAAATTGAGTGATGCTAAAGAAATCTGAGCACTGAAGAACTGATGCTCATGAACTGTGGTGTTGGAGAAGACTCTTTAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAACCCTGAATATTCATTGGAAGGACTGATACTGAAGCTGAGGTTCCCATACTTTGGCCACCTGATGTGCAGAGCTGACTCATTGGAAAAGACCCTAATGTTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCATCACCGACTCGATGGACATGAGTCTGAGCAAGCTGTGGAAGATGGTGAAGGGATAGGAAGCCTGGCGTGCTGCAGTCCATGGGGTCACAAAGAGTCGGACACGACCGAGTGACTGAACAACAACAGAAGAAATCATCGCTTCATCTCTCTTCTTAAAAGTGTGTGTCTGCACTGCTATAGTTATTAATAAGATGGATAACAAGGACCTACTGTACAACACAGGGAACTCTGCTCAATGTTATGTAGCAGCCTGGATGGGAGGGAGTTTGGGGGAGAATGGATACATGTGTATGTATGGCTGAGTCCCTTTGCTCTTCGCCTGAAAGTGTCACAACATTGTTAATTGGCTATACTCCAATATAAAAAAAGTTCAAATAAATTCCTAACGTGATGCTGTGTCGAGAAGCATACACAAGAACAGGTGCTAGTCTTTCTGTCCAGGAAGTGGAGCCAGGTGGCCAGGGGTGGTGAGGACCAAGATAGAGGTTTCACTCTACCTTTTCTGGTACGTTTTGAATTATAAACCATGTGTATGTATTACCTACTCAAAAAAATAAATAAAATTTAAACGTGAAAATCAGGTACTTTCCAAATAGCACTGTTAAATCAGTGTACCATGTGTTAAATGTACG TCONS_00077701 r 3' 50448 TCONS_00077701 r 3' 57686 EMBV3_20315 CGCTACTTTCGAGACTACTTTCCCATTCAGAGCCGACCTGGTTCCCACCTACTCCTTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05390 TACACTGTCATGACTGCTGTGGACAACATCGCTGAGGCCTGGACGGAGTTGCAGCCTGCT Gene GeneID:521820|LOC521820:XM_002695516:337_cdna Constitutive 0 NULL GeneID:521820 18 GENE LOC521820 NULL similar to Tigger transposable element-derived protein 2 EMBV3_39490 TCTTTTTTTTTTTTTTAAGGGAAGGCAGGGTTCTGGCGGTTATCCATCCCAGGAAATAAA Gene GeneID:506466|LARGE:XM_002687674:57_cdna Constitutive 2 NULL GeneID:506466 5 GENE LARGE NULL like-glycosyltransferase EMBV3_28687 TCCTCATTCATCATTCTCTATACTGGTTGCGGGGGGCGGGGATCTTTGGCAGACGTACAT Gene BVT0102_127417 - 1 EMBV3_09085 GK000023.2:16740810-16747957 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12386 ATCTGCTGCCTAGAGGGTGTCTTAACAGAAGTGTCTTAACCAATCCAGCTCCTCTCTGGG Gene GeneID:508153|LOC508153:NM_001100322:2_cdna UTR3_Alt 1 NULL GeneID:508153 21 GENE LOC508153 NULL similar to Myeloid-associated differentiation marker EMBV3_36281 CACCGCTTGCAGTGTTTCAGTGGACATTTTCACAATTCTGGCCGCTTGGACTTCACAGTA Gene GeneID:508864|ZBTB20:XM_002684783:11_cdna Constitutive 1 NULL GeneID:508864 1 GENE ZBTB20 NULL zinc finger and BTB domain containing 20 EMBV3_24846 TGGACAACATAGAGCAGAAGGTGTATTCATGGCTGCTCGCTGTTTGTGGCATGCAGACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17475 AGGAATTCAGGGACGTGGAGAGGACCAGTGAGACCCTGACCAAGGACTTCCACCAACATT Gene GeneID:783716|LOC783716:XM_002700343:2_cdna Constitutive 0 NULL GeneID:783716 X GENE LOC783716 NULL similar to S100 calcium binding protein A14 EMBV3_29040 GGATCCGTGTGCAGTTGTCCAGAAAACGTAATGAAGACGAAGACTCGCCAAACAAGCTCT Gene GeneID:784773|LOC784773:XM_002699863:65_cdna Constitutive 0 NULL GeneID:784773 X GENE LOC784773 NULL similar to ribosomal protein L31 EMBV3_17037 CAGTTGCTGCCTGTGGGGTGGAAATAGAGTTTGAAGTGGGTATACATGCAGAAGTAAGGG Gene GeneID:540802|ASB3:NM_001076927:167_cdna UTR3_Alt 4 NULL GeneID:540802 11 GENE ASB3 MGC142427 ankyrin repeat and SOCS box-containing 3 EMBV3_11251 CCTGGTGCCGTTAAAGCATCGCTTACCTTGATCCTAAATTTCATGAGTCCATGAACAATG Gene GeneID:540532|ZBTB44:XM_002699251:275_cdna UTR3_Alt 2 NULL GeneID:540532 29 GENE ZBTB44 NULL zinc finger and BTB domain containing 44 EMBV3_34431 AGGAGGGATCGATGGTTTCGAAGACAGAAAACCATCAGGGATTCTTTGCCGACCTGCACT Gene GeneID:100302388|LOC100302388:NM_001163000:304_cdna Constitutive 0 NULL GeneID:100302388 19 GENE LOC100302388 NULL hypothetical protein LOC100302388 EMBV3_26930 GCAATGATGGTTGTTTAATCAAGGTCCATCGCCACCATCTTGGTTTATGTTGGCCGATCC Gene GeneID:767986|C5H12orf29:NM_001077047:53_cdna Constitutive 1 NULL GeneID:767986 5 GENE C5H12orf29 C12orf29 MGC128722 chromosome 12 open reading frame 29 ortholog EMBV3_40759 GGGAAGGTCTAGTAAAAAGACAAGTGGTGGGACAGTGGGAACCTGCAACCAAAAACAGCC Gene GeneID:511802|CDK19:XM_002690114:123_cdna Constitutive 0 NULL GeneID:511802 9 GENE CDK19 CDC2L6 CDK8 cyclin-dependent kinase 19 EMBV3_36843 TCAAAGTAGCTATGTCGAAGGAACAGTATCAGCAACAGCAGCAGTGGGGATCGAGAGGAG Gene GeneID:527471|HNRNPD:NM_001098064:16_cdna Constitutive 1 NULL GeneID:527471 6 GENE HNRNPD HNRPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) EMBV3_08603 TCTTCAGGCTCATCAAAGACTCTCGAGGGACCCCCAAGGCCGAAGCCTTTTTCCCAAACA Gene GeneID:508161|PADI4:XM_002685740:483_cdna Constitutive 0 NULL GeneID:508161 2 GENE PADI4 NULL peptidyl arginine deiminase, type IV EMBV3_09993 GTGAGGGCTGACCCTTGAGCCAAGACGCTTTCACCTGTGCTTTTCCTTTTCACCTTTATC Gene BVV0102_009362 - 1 EMBV3_30174 GK000005.2:107709873-107729512 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33826 GAATACCACCTGCTATAAAATCTGCAAACTCGGAACTTGGGGGGATCTGGTCAGTTGGCC Gene GeneID:540180|COPS8:XM_002687857:87_cdna Constitutive 0 NULL GeneID:540180 5 GENE COPS8 NULL COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) EMBV3_33806 GTGGATGCCATCTTTGGCTTCAGCTTCACGGGATGGGACGTGGAGAAGGGAAGCTCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18176 GTTGTTCTGCTATCTTCCAATCTGGGCGAGTTTTTCTTACAGTTAGATGTCAGATGCCGT Gene GeneID:616965|FAM72A:NM_001101263:109_cdna Constitutive 1 NULL GeneID:616965 16 GENE FAM72A NULL Protein FAM72A EMBV3_38344 CTTCAGAGATACAAACTCCAGTGAGAGAAGACATCCAAGGAAGGCGCCAACGGGCTTCAC Gene GeneID:100336125|LOC100336125:XM_002698933:180_cdna Constitutive 0 NULL GeneID:100336125 28 GENE LOC100336125 NULL hypothetical protein LOC100336125 EMBV3_07849 TGTTATCCAGGCGCTGGATGGGGAAATGCGATCTCCCTGGAGTTTCGAAATCTGGCTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30185 ATGATCACGGAGCAGCCTCAGCCTAACCTCCCCGACCAGTTGGTGATCGTCAATGAAACA Gene GeneID:615054|CLEC16A:XM_002697893:480_cdna Constitutive 0 NULL GeneID:615054 25 GENE CLEC16A NULL C-type lectin domain family 16, member A EMBV3_26605 AGGCCGCGCTATCCAAAGGCTTCAGTTGAATATTACAAGAGGATCATCATTGCCAATGGG Gene GeneID:518599|LCTL:XM_002690475:394_cdna Constitutive 0 NULL GeneID:518599 10 GENE LCTL NULL lactase-like EMBV3_23656 TGACATTGTGATTCGCCACGTGGCCCCCCATCCCAGAGAACCCTCACCCGCAACTGGCCA Variant GeneID:506163|MOSPD3:NM_001034265:98_cdna 424^620 4 EMBV3_34360 GeneID:506163 25 GENE MOSPD3 MGC127964 motile sperm domain containing 3 EMBV3_03550 GGAGGAAGGACGGAAAATGAAAGTACACCCTGTGTGAAACATTTCGTTGGAAACTAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36105 TAGCGTCAGCGCAACTTCCTGTCGTACTGGTCTTTCTGTTGATGAAATCAGAGCCTAAAG Gene BVT0102_155908 + 0 NULL GK000016.2:12688468-12762909 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26867 GAAGGACTAATTTTATCTCTGCATCAGTTATAAGGAAGCGTCCCATCTATGAACAGGAAC Gene BVT0102_105585 + 0 NULL GK000005.2:19461416-19539972 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194077 TCONS_00194072 TCONS_00194080 TCONS_00194081 TCONS_00194069 TCONS_00194075 TCONS_00194076 TCONS_00194073 TCONS_00194079 TCONS_00194078 TCONS_00194068 TCONS_00194074 TCONS_00194071 TCONS_00194082 TCONS_00194070 1 XLOC_117660 Coding TCONS_00194068 XLOC_117660 Coding Coding ATP2B1 5:19537247-19566379 j TSS144898 4287 1 TCONS_00194068_2 407 0.0389549801726149 7 0.853077477601181 0.000292840227194764 0.00208456158575179 0.00114786289701629 0.000659774885253524 0.00184904541130698 0.000860974012650162 0.000415336377798349 0.000555416572695019 0.00218128465408299 4.50028745112229e-05 0.00023284229278757 0.000116516998132949 0.000425058012359428 1.22038512776688e-29 4.93043368047274e-11 0.00359504142964067 0.00249126444814383 0.000426564533078422 0.00193523644115569 0.00143182015854707 1.68712332028573e-14 0.00108001513601948 0.00197913584741135 0.000994054700070088 0.0013306290734125 0.00121408975282097 0.0010097516651946 0.000394268103168635 1.67032992117994e-97 3.10350628363596e-05 XM_005206044.1 ATP2B1 PREDICTED: Bos taurus ATPase, Ca++ transporting, plasma membrane 1 (ATP2B1), transcript variant X1, mRNA. 0.0 5898 100.00 0.762537905295078 NM_001682.2 ATP2B1 Homo sapiens ATPase, Ca++ transporting, plasma membrane 1 (ATP2B1), 0.0 6148 92.71 0.976673664567296 TCONS_00194068_2 sp|P20020|AT2B1_HUMAN AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1; 0.0 758 91.24 0.997542997542998 2 coding 0 0 0 0 -0.0990778676499276 0.532166468902846 -0.00376725289053866 0.94504475228983 GCTGTGAACCCAGAGTTTCCCACCCTGCCTTGTCCCAAACTCATTATGGGTATCGCTGGAACTGATGTAGCTAAAGAAGCATCTGATATTATTCTCACGGATGACAATTTTACAAGCATTGTTAAAGCAGTTATGTGGGGACGAAATGTCTATGACAGCATCTCAAAATTCCTTCAGTTCCAGCTTACCGTTAATGTAGTAGCTGTGATTGTTGCTTTCACGGGTGCCTGTATTACTCAGGACTCGCCACTTAAGGCTGTGCAGATGCTATGGGTAAATCTCATCATGGACACACTTGCTTCCCTGGCTCTGGCGACCGAACCCCCCACTGAATCTCTCTTGCTTCGGAAACCGTATGGTAGAAATAAGCCTCTCATCTCACGCACAATGATGAAGAATATTTTGGGTCATGCATTCTATCAGCTTGTCGTAGTCTTCACACTCTTGTTTGCCGGAGAAAAGTTTTTTGATATTGATAGCGGAAGAAACGCTCCTTTGCATGCTCCTCCATCGGAACATTATACTATTGTTTTTAATACCTTTGTACTGATGCAACTTTTCAACGAAATAAATGCACGGAAAATTCACGGTGAAAGAAATGTGTTTGAAGGAATCTTTAATAATGCCATCTTCTGCACAATTGTTTTAGGCACTTTTGTGGTACAGATAATAATTGTGCAGTTTGGTGGAAAACCTTTCAGTTGTTCAGAACTTTCAATAGAACAGTGGCTATGGTCAATATTCCTAGGAATGGGAACGTTACTCTGGGGCCAGCTTATTTCAACAATTCCAACTAGCCGTTTAAAATTCCTCAAAGAAGCTGGTCATGGCACACAGAAGGAGGAAATACCCGAGGAGGAGTTAGCGGAGGATGTGGAAGAGATTGATCACGCTGAGCGGGAGTTGCGGCGTGGCCAGATCTTGTGGTTTAGAGGTCTGAACAGAATCCAGACACAGATTCGAGTGGTGAATGCATTTCGTAGTTCTTTATATGAAGGGTTAGAAAAACCGGAATCAAGAAGTTCAATTCACAACTTTATGACACATCCTGAGTTTAGGATAGAAGATTCAGAGCCTCATATTCCCCTTATTGATGACACTGATGCTGAAGATGATGCTCCTACAAAACGTAACTCCAGTCCTCCACCCTCTCCCAACAAAAATAACAATGCTGTTGACAGCGGGATTTACCTTACAATAGAAATGAACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCACTACATAGTTTGGAAACATCACTCTGATTGTAAGCTGAACGTTAACACACTAGCTGCATTGTAAAGAAACAAATTGAAACTGGGTCTTTTCACATATTGTGACGGACAAGATAGTATTCTTGTCTCTGGACTTCAACAGAAGACATACTTGTACGAATGTAGATTTATTTTTTTAAAAAAAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTTTTGGGGGGTGGGAGAAATGAACTGACAGATAAACAGTAACTCAGCATAAGTCGACCTGTGGATCATCAGTAGAACCTAAGAATGGTCCTGAACAGTATATTAGCAAAGTTTTAGTTGATCTCAATCCTTGATGGGAGAGAGGGAGGAATAAAGCTGGGCAAGCAAGCAAAGAGCCCTGGATCATTGAATTGATGCTTTAATTTCTGCTGTTGGCTGTTAATAATTTGGATTATTTATGTTTATAAATGATGCAGATCTGTTTACAAGGTTTGTAGATACTTTTTTTGTTCCTGTTCATAGATGGGACGCTTCCTTATAACTGATGCAGAGATAAAATTAGTCCTTCAAATACTGCTGTATTTTCAGGAAAAAAAAGGAGGGGGGGTGTTTCTATTGAAACTGTACTAAATTTTTGCCTACAATTTACCTTGTTAAATACTGTAGATAAATTGCTAATACTAATAGCCAAATAGATAACACTAATGCTTTGTTTAAAAAAAAACAACAACAAAAAAAACAAAACAAAAAAAAACATGAGCAGTGGTGTTCTAATGAAGTTATGGCATCTGTCTTAATTAGTTTCTTAAATACATTTACTACTTAATGGTTTTGAAACAACTGTTTAATTTTTAAAATTTTTGAAAACTTGCTAATAACCTTTGTTCAGAATTTAGTAGATTGTTTAATGCAGGACATCAACGACATAATGAAAGATGCTTGAAATGCTTTTGTTATTTCAGGCAAATCAAATTAAATCAAACTATCAAACTACAAGAGAATTTTAGTCCTTTTTGTTTTTGTCTAAACATGTTAGTTCAGTGATGTCTTGGTGAACTGTGAGTGAACTGTATTGATTTTATTTTTTTCTAATAAATCCTTAGAAACCTTCATACAGCATGAGGGCTGTTGGCATTTTGAAAAAGGTTAATAAGTAGAAGCATACATGTTTTCCTTTTGTTTTTGAAACTTGTTTGTAAACATAAATAAATATGCCCTTTTATTAAATAAATACACAGCAATTTTTTTTAAAAAGAACTTTCAGCTTCTTTACTCAATTCTGCCTATGTGGTGCATCGGTCTGTTCTCTTTAACTGCAATTGGAATAAATTTCAAGATGGTAACAGCCCCATGAGGTACCCTCTTTAATTCCTTGGTGGCAGTCTACTAGAAGCAGATTAAGAAAATCATTGCAGTTTGACATGTTCTTCGTAGAGTTTATTTAGTTTGCCTAAAATAGTCTCAGTTTAAAAAAATAATAATAACGACCGCCATTGTCTCAGATACATTTGTTTTCATTCTTAAGTGGCCAAATAACAAATTAGTTAAAATGATAATGTGAAAAGATGGGAAAGGCCCTAAAAATATATATTTAGATGTATTACTTAACGTATGCTGGAATGCCTGTCTCTAAGCCAGTTGGATTTTTCAAGTCTTTATTTCTTTGGTCTGCCTTCTCCCCTCTTTGGCCTCTGTCGTTACCATTTAGGAACTGGCACTGTGTTAGGGCCCAGATTTCACCAGATATATAATCCTCAGGCTGACATAAAGTTTACAAGGACTACTACAACATCTGAAAATGCTGACCCAGCAAAGAAACATTTAGTTGATGGTGCTTGATATTTTTGGTGGGTCGGGGAGAATCTTTTTCTCTCCATCAATCCTTTGCAGTTATCCTCTGCAAGACTTAGAAACACGTTGGCTCTGTCAGCATTGGTAATTGTACATTACTCATCAGGTATTTAGAGTGAATCATACTGTAAAAAGAGGTAGCATGATATGCTGGAAAGCATACTAGGCTAGGAATCAAGACCTGGTTTCTAGTCTGGGTTTTGCTATTAATGTGCTGCATGACCTTGGGAAAATCATCTCCCCTACAAGAGGGTGGTGGACTAGACTATCTCAAAGAACCCTTTTCAACTCTAAAAATTTATCCTGTCAACTGGAGAGCCTACGAGGCATAGGGAATAGAGAAAAGGGAAGTGTTTTCAGTTTTCTTTTTTATTTTGATTATGCTTAAATATGAATGTAATTACCAAAAGATATAGAAGTGCATGTGCTTTGGAGGGTTTGTATTGAGCTTTTACAGTATTCATTTTTCAACTTAAGGCAATGGCTTTTTACACCAACTCTAATCCATAAACGGGTCTTATGACATCCATGAAGTAGTAGCAAGACATGCTTAGTGTGTATTTCTCTCTTTGAGACACTGTAATTTCTACCAGAAATTTCCAGAGCATTATGTAAGTAGGAAAAAATGCAAGCAAGCTGTTAAAGATCTTGGATCCCATTATATAGTATGTATAGCTGAAATCAGCATCTGTAATTCAATCACTTTTTCTCTTTTATCCTCTAACCAAAAAATTGTTTAATTTTGCATCCCAAATGTTTTTAATCTTTGTATATTTTTTAAAAATCTTTTTCTCCTCATCATTGCCTTTTTTGTGGTTGTAAATAGACTTACTTGCACTTTGAAGATGAGTTACTCCTTGTCATCTTATAAATATGTGATATGGTAATTTTCATAACAGATGTCAGTTTTGAACCAAGAAATGGCAATTTGTTTATAAGAAAAAAAAAACTGGCTTCATTTCTGTGAAACTGCTCTTTGAAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGATGCTTACCATCTATTTTAGCCACTGAGCCTTTTATTATTTGTCTATTTGTAAAGTTTATTTGTCTTAACTCATTTAATAAATATACTGTTTATCTGTTTCTGAATGGGGACTGACTGAACTTTTTGAATATTTAAGTTAATCTGAACATCATATTTTG EMBV3_24045 GAGGTTGTGGCTGGGATAAAGGAGTACTTCAATGTGATGCTGGGCACTCAACTGCTCTAC Gene GeneID:785568|LOC785568:XR_083597:225_cdna Constitutive 0 NULL GeneID:785568 2 PSEUDO LOC785568 NULL similar to MORF-related gene 15 EMBV3_27140 CACTATTCTACTCTCATGACCCAGAGGGTTTGTGTCCAGTTGGCCATAGTGTCCTGGATC Gene GeneID:783299|LOC783299:XM_002707894:116_cdna Constitutive 0 NULL GeneID:783299 15 GENE LOC783299 NULL similar to B7 olfactory receptor EMBV3_22347 TGTGACCGCATGTGAGGCAGCCCTGAAGCAGAGGAAACCGGTCGTGATCGACAACACAAA Gene GeneID:616621|PNKP:NM_001083522:394_cdna Constitutive 2 NULL GeneID:616621 18 GENE PNKP MGC143056 polynucleotide kinase 3'-phosphatase EMBV3_14775 GTATACACACAAAATTTATCACCTAAAGAGGACTACAAAGCTGATGAAGACCCAGCGTTA Variant GeneID:613773|PITPNB:NM_001078040:83_cdna 266^524 4 EMBV3_40203 GeneID:613773 17 GENE PITPNB MGC139835 phosphatidylinositol transfer protein, beta EMBV3_21269 CACCTCGTACTTTAACCCGGGCTCAGTGGTTTGAGATTCAGCACATAAATATGGCCCACC Gene GeneID:100125948|RNASE2:NM_001105511:2_cdna Constitutive 0 NULL GeneID:100125948 10 GENE RNASE2 MGC157036 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) EMBV3_17780 TCCGGAGAGCAGGATCTGACTTTATCTCAGGTATTCTTCTTACTAGCTAAGCAACACAAT Variant GeneID:617342|CCDC83:NM_001038218:41_cdna 162^302 1 EMBV3_41255 GeneID:617342 29 GENE CCDC83 MGC134289 coiled-coil domain containing 83 EMBV3_18617 TGAGCCTCTGAAATCAGGGACAGTGATGGCGGCGGGTGGTACACGGGGCCTTTCTTATGT Gene BVT0102_249984 + 1 EMBV3_14560 GK000029.2:50570676-50653559 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168127 1 XLOC_102962 NonCoding TCONS_00168127 XLOC_102962 NonCoding NonCoding - 29:50616608-50617224 - TSS126105 616 1 TCONS_00168127_1 57 0.288961038961039 1 0 0 0 0 0 0 9.67817246497104e-07 0 0 0 0 0 0 0 0 5.68900464919868e-07 0.000836080222183614 0 0 0 1.29715575513159e-06 4.92813436138367e-07 0 0 0 0 2.28749901689929e-06 0 0 0 0 NM_001104968.1 ZNF266 Bos taurus zinc finger protein 266 (ZNF266), mRNA. 8e-76 288 94.57 0.297077922077922 0 noncoding ACCTCCAGGTTGCCTTAGTGTGGACACCAGGGGAGCCCCCACCTTCCTCCCCAGGAGCCAGGCCCTGCCAGCACCTCCTATCTGGTCCAGGCTCTGAGTGCCTGCTTGCGGGGAGGCTTAGAGCTACTCCCATCTCCAGGATCCGATGTGAGCACCACTGAGGCACGTCTGAAGGACACTCAGAGTGTCTCCCGACACATAAGAAAGGCCCCGTGTACCACCCGCTGCCATCACTGTGTCTGACTTCAGAGCCTCAGGTGCCAGGTCGCCCCATCTCTGCCTCCTGTCCTGACCCAGCTTTGCCTCTCAGGCCCCAGGCCCCATACCAGGAGGGTGACTCCTCTTCTCTGGTGATCCCTGAACTCTCCTGCTTCCACATCACTGCAGAATTGTTGGTTCAGTTCAGTTCAGTTGCTCAGTTGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATTGCCAACTCCCGGAGTTCACCCAAACTCATGTCCATCGAGTCGGTGATGCCATCCAGCCGTCTCATCCTCTGTCATCCCCTTCTCCTCCTGCCCCCAATCCCTGCTGGAGTGGTCACCTTCACCGAGAACAACATTCCAG TCONS_00164249 TCONS_00164250 . 5' 36336 TCONS_00164249 TCONS_00164250 . 5' 36336 EMBV3_41223 AGCTGGATTCAGATCATCCAGGACACGATCAACACCCTGAACCGAGATGAAGATGAAGGA Gene GeneID:100337482|LOC100337482:XM_002696530:166_cdna Constitutive 0 NULL GeneID:100337482 21 GENE LOC100337482 NULL A-kinase anchor protein 13-like EMBV3_37236 TCAGTCTTATATAGGGTCCTGGGTACTTGCAGAAAATCGGCCTGGAGTGAAAATCCTAGG Gene GeneID:613474|OBFC2A:NM_001098124:17_cdna Constitutive 1 NULL GeneID:613474 2 GENE OBFC2A NULL oligonucleotide/oligosaccharide-binding fold containing 2A EMBV3_12473 CTACGTCTCCTCCTTTGTCCCTGCGTGCTCCCTGCCCTCTTTCACCCGGAGCACGCCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18424 GATGTGATCTACTGGTTCCGACAGATCATTGAAAGAAGGGTTCATGACGTCGTTTGCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01861 CCGACGGCCGGACAAGGCCGCTCAGGCCCCTCCCTAAAGAGGCTGCTGGGGAGGGGCCCA Variant GeneID:527400|H1FOO:NM_001035372:128_cdna 672^841 3 EMBV3_40973 GeneID:527400 22 GENE H1FOO NULL H1 histone family, member O, oocyte-specific EMBV3_34709 TCTCGATATTGGTCAGCCCAATTTGGTGATTGTACCACTCCACGATGAGTTCTTCCAAAC Variant GeneID:280934|SULT1E1:NM_177488:5_cdna 108^180 2 EMBV3_21600 GeneID:280934 6 GENE SULT1E1 STE sulfotransferase family 1E, estrogen-preferring, member 1 EMBV3_13084 AAAGCTTATACTGGCTGGCAATTCAGCAGCTGCCCACAGACCCCATAGAGGAGCAGTTCC Gene GeneID:616678|ZMYND19:XM_002691688:3_cdna Constitutive 0 NULL GeneID:616678 11 GENE ZMYND19 NULL zinc finger, MYND-type containing 19 EMBV3_25244 GCAAGATTTTTAGGGTCTGTAGCAAAATGGGAAATAAGGATTTCCTGGTATCTTTTTCTT Gene GeneID:281860|IL1RN:NM_174357:17_cdna Constitutive 1 NULL GeneID:281860 11 GENE IL1RN NULL interleukin 1 receptor antagonist EMBV3_30446 GCCTATAATGGGGAGGTTCATGTGTGCTAAGTTCCTTCAGTTGTGTCCGACTCTGTGACC Gene BVT0102_105957 + 1 EMBV3_36459 GK000005.2:36387633-36425015 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24001 TGGCTGAGCCCCCATTTACTATATTCTTAATAATCACTGTCATCCCCTTAAATCTGTGCC Gene GeneID:533554|FBXO38:XM_002689284:107_cdna Constitutive 0 NULL GeneID:533554 7 GENE FBXO38 NULL F-box protein 38 EMBV3_36265 CTTCCCTGCCTGGGCAGACTATTAACCAGAGAAGAAAGTGCTTTTTCATGCATATTCACC Gene BVV0101_010144 + 1 EMBV3_40784 GK000010.2:81624745-81675808 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014973 TCONS_00014971 1 XLOC_008398 Coding TCONS_00014973 XLOC_008398 Coding Coding PLEKHD1 10:81623559-81626684 j TSS10682 2670 2 TCONS_00014973_5 111 0.0764044943820225 3 0.14628681177977 0.00123981572556548 0.000960015109299379 0.000825715581694578 0.00130828918884347 0.000847666058062738 0.000409954298598056 0.000363096320874983 0.00043988479483148 0.000620073482018252 0.000126363027605565 4.45833947215743e-05 8.03518204353393e-06 2.29988549419044e-09 0.000223748246869754 0.00014265958565476 0.00073135608433913 0.000465045447309213 0.00185736243079698 0.00181214243813297 0.000690802417235 0.000534357941826381 0.000221791037579654 0.000606129899725478 0.000237466935659912 0.00109045010388986 0.000842404968611116 0.000607179720322494 0.000214185926477554 0.000149091633957285 9.00699622033039e-06 XM_005211919.1 PLEKHD1 PREDICTED: Bos taurus pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 (PLEKHD1), transcript variant 0.0 4042 100.00 0.838951310861423 NM_001161498.1 PLEKHD1 Homo sapiens pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 (PLEKHD1), mRNA. 1e-138 499 88.00 0.146816479400749 TCONS_00014973_1 sp|A6NEE1|PLHD1_HUMAN PLHD1_HUMAN Pleckstrin homology domain-containing family D member 1; 2e-58 190 96.70 0.989010989010989 0 coding 0 0 0 0 -0.121774368314304 0.382234847975933 0.0244373130426675 0.621288381535591 CGCCCCGCCTTCGGGCGTGCTCTTGGCGTGGCTGCCTTTGGCTCTTGGATCTGGGGCGGGGGGTTCTTTGAAGAGTGTATCCGGAATGCGGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCGGTGTACATCCACAAGGCGGCCACTCGCCGCATCAAGAGCTGCCGCTTCCACCGGCGCAGGTCCAGCACCTCCTGGAACGACGTGAAGCCGTCCCAGTCCTTTATGACCTCCCAGCTGGAAGCCAACAATATGGAGGAGCTGAAGGAGGTAGCCAAGCGGCTCAGCAGGGACCAGCGCTTCCGAGAGTCCATCTACCACATCATGGCCACGCAGCCTGGAGCCCCCTCTGCGCTTCCCCGGGGGGGAAAGTGATGGGCACCCCTCCCCTGGCCCCCCAAGGCCTTCCTCACTGGGGGCAGAGGCGTGGCAGGGGGAGGCCTAACTCCACCCAGTTCCTCTCTGCCAGTGCTCCACCTGGGGGTGGGCAGCCTCACCCTCAGAGGACAGGAGTGCCACCCCGTCCCCCTCACCCCAGATCCTACCCTTGCGTCCAGGCCAGGCCTGTGCAGGCTCAAGCTGGGTGCTGCCTGGTAAAGTGAAGGAGGGGCCTGATTGTGTGGAGAGACTTTTCTGACTAGGGGAATGGGGTGGGCAGGGCCCACGACCCTCTGTCAAGCGCCCTGTACCTCTCTGTGACTCTGCCACCCTCCTTGACCCTGGCTTCCCCAGGGTTTCCCAGCCCTCCTTTGGCTTTTGAAACCCTCTGTCAAGGCCCCTTCTGTCAACCACACTATGGGGGAGAGAAGAAAGGGGCCCGATGCGCTTCTGGGCTGGCGGCCCGCCACAGTCCCCATGGGCCCCTTTCCTGGGGGGCCCTGGCTGTGGGGCTGCTCGCTCACTCCCCTCCTCAGGTGAGCTCCCCCACCTGCAGCCTCAGCACCCTCGAGGAAGACTTGACTACTCCCCCACCCCCAAATCCCTCGCATATGTGTCCTGAGGGCCCTGGGCCGGAGCTGCGGCCAACAGCCATGCTGAAGTCTACCCCAGAGGACAGGAAGCAAGTCAGGGAGTGGAGGAAGGCAGCCGGGCTCCTGCAACATCCACTCCCAGTCAGGCGGGGAGGCGGCTCCCTTGGCCGCCGTGGTCCAGCTGGTCAGTGGGGTCCCGGAGGTCTCCCTCTCAGCTGCCCCCACTCGGATCACCTTGCCTCCTCCCTGCAGAAGCTTTACCCCATGCAACTGCCACTGCGAGCCCTGGAAGATGGGGTTTGGGCCTGTAAGAAGGCTTGCAGCCATTGGTTGGCCCAGTGTCATCAGGGGTGAAGCTGGAACATCCGTCTGCAGCTTTTGTGGGAGACACTGCCCTCCAGGGGGGCGCTGAGAAGTGCGTGTCCCTCATTCATGGACAGACCGTCTGCCCGGCATCCTCTCTGGCAGGGCCTTTTGTCCCAAACTGCCTGAGTCTGTTAGCCTCTCCCCAAAAGGAGTCCCCATGGGTCAGGGTGCTCAGGGATGCTGGTGGTATTGAAGGTGCTGATCCTCTGATGTTCGGAAAATGGAGCCGTTGGAGAGGTGGACAAATGGCTGCAGGGCAGGGGCCTGTGGCCTGCTTTGTGGGGAAAGGAATGTTACTGACTCAAAACACGGGCGTGTCTACTGCTAGGCCAGCCAAGGCCAGGAGGGCTGCCCTGCTCTGCGGTCAGGGCTGCCGGAGAAACGAACCTTAATGGTCCCTTCTCCGTGGTAGGCGGGCTTCAACCAGTCTCTTCCAAGCCTAGGTGCAAGAGGTGCAAGAGTTTCAGAGTCAACGCATCTGAAAGGCCTGAGTCTCCATGTAAAGCTTTAAACATGTAGGAACCTGCATAAACCTGGAACCCATTGATCCATCACGTATGCGAGATGGACTTTGAAATGAGGACGATTTATCAACCGAGATTACTATTTTATTCTTTGTTTTTAAAGACTCCAAATTAATAATGGTTTGCTCTTGGAGAGAGATTTTTCAAATGCACTTCCCTGCCTGGGCAAACTATTAACCAGAGAAGAAAGTGCTTTTTCATGCATATTCACCAACCTCTAATTTCTTTCCTCCTTGCTCACTCTGTACTTTCCATGCCTCAGGCAAGTTTGGGTTTTCTTCAAACAACTGATCAATCCACAAGTATTTATTTGTTAAAAACTTACTCTGTACCTAGCACTGTATATAGAAAGAGAGTAACATCTCTTTGTGACAATATGTAGGGGTAAAAATTACTTACTGGAAATATATTGATCTGATTTTTTTTTTTTTTTTTTTTTTTACAAAAAAAAAACCCTAATTCCTTGGTCAATTAAAAGCGTTTCCTGCAGTCACTCGCATTGTGGTAATTGCTAGAGAGATGTTGCCCCCTGCAGGCTGAATGTGGAATTACGGAACTGGCTGCTTGTGGCCATTTAAACCCACGTGTCCCTACTTATGGAGAAGGCAATGGCACCCTACTCCAGTACTCTTAACCTGGAAAATCCCATGGACGGGGGAGCCTGGTGGGCTGCAGTCCATGGGGTCGCTAAGAGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGGCAACCCACTCCAGTTCTTGCGTGGAGAATCCCAGGGATGGGGGAGCC EMBV3_31146 GGTCTTAGGCTTCCCGTTGTGTCTCCTGTGTGTGGTGCGCTAGCTCTGAAATTGTCTGTA Gene GeneID:514561|UBR4:XM_002685736:471_cdna Constitutive 0 NULL GeneID:514561 2 GENE UBR4 NULL ubiquitin protein ligase E3 component n-recognin 4 EMBV3_43508 ACCTTCACTTCCTGTTGGATTTTAACACAGATCAGACACAGGCCCAAGGCACACTACATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05425 GTGGTCGACTTCGTGGCTTTCCAGGACATCTCCCTCAAGAGACTGCAGCGACTGCAGCAA Gene GeneID:789154|TNFRSF6B:NM_001101306:1402_cdna Constitutive 0 NULL GeneID:789154 13 GENE TNFRSF6B NULL tumor necrosis factor receptor superfamily, member 6b, decoy EMBV3_13036 TTTCTTACACTATCATTCTTGCTACTGTCCATCGCCAAGCCTCTGGTGGGACATCCAGGG Gene GeneID:784908|LOC784908:XM_002690686:293_cdna Constitutive 0 NULL GeneID:784908 10 GENE LOC784908 NULL similar to Olfactory receptor 4K1 EMBV3_08274 CACACTCAGATAAGATTATGTCCTGCGTCATGCTTCCCATTGGTGCTGTGGTGATGGCTG Gene GeneID:523418|SLC38A11:NM_001031760:97_cdna Constitutive 1 NULL GeneID:523418 2 GENE SLC38A11 FLJ39822 solute carrier family 38, member 11 EMBV3_19741 CATGCCATGGCCCACTACATTGTGAAAATGGCAGCATGGTGATTCATTTGATGCTTCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04805 TTGGCCCTGACGTTCTAGCATGTGATTGCTTCACTCCTGGACTATGACTTTCAGTGGGAG Gene GeneID:788060|SUMO1:XM_002690794:237_cdna Constitutive 0 NULL GeneID:788060 10 GENE SUMO1 NULL SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae) EMBV3_17394 CCCCCAGGGAAGTCCTCAACAGTATATTCTCATGCCTGAAAGTCGCTTACTGATCACACC Gene BVV0102_196529 + 0 NULL GK000022.2:56742876-56761383 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131667 1 XLOC_080372 NonCoding TCONS_00131667 XLOC_080372 NonCoding NonCoding - 22:56754666-56756306 - TSS98534 1640 1 TCONS_00131667_2 78 0.707926829268293 1 0 9.12578192557452e-05 3.67625529971804e-05 0.000197493823100858 0.000303810607982361 3.91361771568791e-05 2.83546779084364e-05 0.000120901071604939 6.85242109247059e-05 0.000120276386818324 2.50883959421044e-06 0 0 1.5746067338294e-05 0 0 4.83138984269295e-05 0 0 5.24701963147579e-05 4.385021240974e-06 2.96168842995734e-05 0 7.27210568987036e-05 0 0.000232358476730272 3.43680554678768e-05 0.000121980582146757 0 5.03221501896049e-05 5.13240375948912e-05 XM_005213807.1 TNFRSF19 PREDICTED: Bos taurus tumor necrosis factor receptor superfamily, member 19 (TNFRSF19), transcript variant X1, mRNA. 1e-65 255 85.90 0.135365853658537 0 noncoding 0 0 0 0 0.227275271093518 0.249817547141721 -0.101961570039176 0.202880932017823 ATGCGTCTGCTTTGGCATTTCTCTTCTTCTTCAGAGAGCCCCGCTTCTCAGAAGTCTTCCTTGACCAGCCCTTCTCCCCACAGCCCCTAGACAGACCAGGAAGCTGTCTTCAGTCCCTTCTCCGTGTCTGGGGCCCAGCGGCTGAGCAGGTCTCCGGGATCACACCATGAGCAGTGGTCGAGCAGTTACATGACTGTCAGCCCCACTGGGGCTGTGAGCAGACCTGGGAGGGGCCGGTTCCTCTGCTCCGAGACCTCGGACTCTCACTGTGCTCAGGTGTGAAACAGCGGTTGAGGTAGACATCTCCCGGACAAGGGACAAGTACCCAGAGGAGCCTGCGTCTGCAGGGAGCCCGGCCTGACACTTCAGAGCCAGCTGCCTGGACCCACCCATCGGAGAACTGCAAACTGCTTAGCTGGCGGCCCCTGCGAAAGAACTCAGAAACACCACACCCTCCTATGCGTTCAAAAATTGACATCGACAATGTCGAAGCTAAAATGGGTACACAGGGTGTACTTTTCGGGGTATGTTAAATATGGACACTGTCAGCTTGAACTGTTTGATCACTCCAGGTTACACATCCCTTGAAGCTGAAGAGCATAGTGGCCCCACCGGAACTCATGTAGACAGCACACAAACGAGCTCCTCTGTATTGAGGTTTCGCCTCAGTTTCTCTGAAACTTGTCTTCAGTTCCGCTCCTCTCAAAAGCTTTTAGCGCAGTGTAATTTATTCTTGTGGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCCACCTGCCAACGCAGGAGACGCAGGTTTGATCCCTGGTCAGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTAGTGGGCTACGGTCCATGGGGTCGAAGAGTCAGACACCACTTAGCAACTAAACAACCACAATACACTTTAAAAATATATATATTTATTTGACTTTGCTGGGTCTTAGCTGTGGCATGTGGGATCTGGTTCCCTGACCAGGGATTGAACTCAGGCCCCTTGCATTGGGAGTGCAGAGTCTTAACCACTGGACCCCCAGGGAAGTCCTCAACAGTATATTCTCATGCCTGAAAGTCGCTTACTGATCACACCATCTTCTCTGTGACAACTATGGATGTAAACCAGTTTTAAATTTTTAAAAATTTTCTGTGCTCCTAAGTCACTAAGTGCAAACTGTTATTCTGCAAAGGTATGATCACAAATACTAGTACATGATTGGTCAAAACTATAAATATTATAAGTTTTGATAGATACTGATTACACAAAGTATTATTTCACATGACATTTTTAATGGTTTAACTAGATTTCCCCCATCTTGTGTACTAGTAGAGAAGTATTACTTATCTCTACAGCTTCATCTCTTCTTCATTCTTATTTTTACGGCTATAAGCACTCAGAAATCTTGTCACATAAATAAGGAACAGAAAAGAAAGGAAGGAGTCCTGGAGTAACGTTAACCATGTTACCTCCGTTTGCGTTTTACACCAGAAATCACTAGTAATCCATCAGAAAGAGTTATTTTTTGTTGCCGTCTGGTGCTTGGTATTATTATTTGTGCATGATTCCATTTTTTGTAATAAAAGTTAAAGACATTATG TCONS_00127556 TCONS_00127557 . 5' 6738 TCONS_00127556 TCONS_00127557 . 5' 6738 EMBV3_07301 TCACCGTATAAAATAATCCTTCGGGGATCGTGGGGCTGTGGGGCCTCCAAAGGTCAGCTT Gene GeneID:100138261|LOC100138261:XM_002695765:240_cdna Constitutive 0 NULL GeneID:100138261 19 GENE LOC100138261 NULL hypothetical protein LOC100138261 EMBV3_02865 TGAGTGCCACTACTTCATCTGTGATGTGGGCAACCGGGAGGAGGTGTACCAGACAGCTAA Gene GeneID:100336917|LOC100336917:XM_002683764:2_cdna Constitutive 0 NULL GeneID:100336917 16 GENE LOC100336917 NULL dehydrogenase/reductase (SDR family) member 3-like EMBV3_41399 TTTCCCTTCTCAGCATCCCAGGCTTGCCTCCGACTTTAGGTCCTTTAGTTTGCTTCTGCA Gene GeneID:541236|XBPP1:NM_001034727:80_cdna Constitutive 0 NULL GeneID:541236 17 GENE XBPP1 MGC127699 XBP1 X-box binding protein pseudogene 1 EMBV3_40269 CTAGGAAAACGCAGTTTCTGGTGCCTTCTCTCCAATCAGCTCTTTCTTCAGAGTGAGACG Gene GeneID:534402|PGM1:NM_001076903:72_cdna Constitutive 0 NULL GeneID:534402 3 GENE PGM1 MGC143368 phosphoglucomutase 1 EMBV3_11952 GGCCAGAGTACGACATTCCAAAAGGGAGTGCAAGGACCTAAGAATTTTCCCCCAACACAG Gene BVV0101_049457 + 1 EMBV3_37098 GK000011.2:2494782-2526185 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39474 AGCAAACTGTGGAAAACTCTTAGAGATGGAAATACCAGATCACTTGATGTGCCTCCTGAG Gene BVT0102_117689 + 1 EMBV3_32394 GK000011.2:38930063-39881864 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34690 CACTGGGCTTTGTTTTCAAGACTTTTACCAGCAGTGTCGGGAGGCATTCCTTGTCAATAG Gene GeneID:511281|ORC2L:NM_001101942:91_cdna UTR3_Alt 2 NULL GeneID:511281 2 GENE ORC2L MGC140463 origin recognition complex, subunit 2-like (yeast) EMBV3_36352 ATTCTCAGATCTGGATTCACCATTGTTCAGTCTGAGGGCGATTTATGGCACAGATGAGCT Variant GeneID:785439|NME5:XM_002689211:119_cdna 130^335 1 EMBV3_12029 GeneID:785439 7 GENE NME5 NULL non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase) EMBV3_37982 AATGCGGAGCTGGGAGATCCAACAAAGGTGCTAAACAACAGGGTAACAAAGAGGTCGGTC Gene BVT0102_216357 + 0 NULL GK000016.2:52974450-52989918 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34937 ATGATGGGCCCTGAAGAGGAAGGGGACTCGGCTACTATCGCTGAGGATGAGGCCATGCTA Gene GeneID:512670|PHKG2:NM_001046128:305_cdna Constitutive 1 NULL GeneID:512670 25 GENE PHKG2 MGC129049 phosphorylase kinase, gamma 2 (testis) EMBV3_09787 CTTCTATATCCATCCACTCCTCCCTCTACTGTCGGCCTCCACACTCTCTGCTGCTTAATA Gene GeneID:497015|TPM2:NM_001010995:23_cdna Constitutive 3 NULL GeneID:497015 8 GENE TPM2 MGC129100 tropomyosin 2 (beta) EMBV3_32620 TGTCTTGAGATTCCCGGACATCCCAGGTGATCCTAGGACCAGGAGGCAGAAGCCAAAGAT Gene BVT0102_353854 + 0 NULL GK000010.2:15867516-15887829 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012797 TCONS_00012808 TCONS_00012799 TCONS_00012801 TCONS_00012798 TCONS_00012805 TCONS_00012806 TCONS_00012796 TCONS_00012800 TCONS_00012795 TCONS_00012807 TCONS_00012803 TCONS_00012802 TCONS_00012804 1 XLOC_007928 Coding TCONS_00012802 XLOC_007928 NonCoding Coding - 10:15878879-15889541 - TSS9629 339 3 0.968483256730138 0.00512954290613126 0.00141476399244192 0.00218666166194146 0.00103123930873871 0.0004346163682835 0.000346415731214424 6.30434497808749e-05 2.30400379906305e-309 0.000143065387028765 0 0 0 0 0 0 0 0 0 0.000696255738759083 0.000349339555747971 0.000996141827585842 0 0 0 0.00363921522825959 0.000536891182137195 0.00475084343561047 0 0 0 0 noncoding 0 0 1 0 0.0796498005309051 0.548331970994065 0.0484091448177618 0.336125853055034 CTCTCCCGTGCTTCCTGTCTTGAGATTCCCGGACATCCCAGGTGATCCTAGGACCAGGAGGCAGAAGCCAAAGATGCCCCTCTCTGCAGGTGAGGACACGGTGGCCCAGCCTTGACTTGTCCGTCTTAGCGCCCTGAAGGGAAGCTCTGGGTACTGCAGTTTCCCACGGGACTCCCAGCACTGCCCGCAGTGTCCGGCTCCAGGAGGCACTCGGTGCGTCCTCTGTCCACAGAGTGAAGTGTGGTGGAGGTGGAATGCGGCATGGACTCTCTAACACCGGCACCCCTGCCGTTCGCCATTTGCTGTAGCTTTCTCCCAGGTTTTTACAGAATACTGAGC TCONS_00012793 s 3' 6516 TCONS_00012793 s 3' 6516 EMBV3_22526 TGTAAGTGAGGGAACCTCTGCTGGCCATGTCATCCCCTTCATCTCTCTGGAAGGCAGAAA Gene GeneID:100296370|LOC100296370:XM_002687878:172_cdna Constitutive 0 NULL GeneID:100296370 5 GENE LOC100296370 NULL hypothetical protein LOC100296370 EMBV3_37187 TGCTCAAACCCAAGGCTGTGCTCATCACCTATGGGGCCTATGCCATCAATGGGAAGATTT Gene GeneID:514636|C25H16ORF13:NM_001038106:165_cdna Constitutive 7 NULL GeneID:514636 25 GENE C25H16ORF13 MGC134534 chromosome 16 open reading frame 13 ortholog EMBV3_22116 AAGCTAAACTGGTCAGTATTAATGTCTAGCCCTACCAAAAACAGCCAGTAGCATCTGAGG Gene BVT0102_061310 + 0 NULL GK000001.2:9921006-10034317 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002945 TCONS_00002948 TCONS_00002946 TCONS_00002947 TCONS_00002944 TCONS_00002949 1 XLOC_000743 Coding TCONS_00002947 XLOC_000743 Coding Coding GABPA 1:10031102-10069282 j TSS1519 4929 1 TCONS_00002947_1 454 10 0.871159537965898 0.000207886483172437 0.000261930870204564 2.23689251152763e-15 6.21737804589573e-11 0.000125700083889602 3.52487629529885e-10 0.000150363634448519 7.64921456009724e-05 1.12775489531888e-18 0.000280670569286824 1.3159693728015e-05 1.61259403155754e-11 3.08398501196777e-12 1.8489190225313e-11 0.000306243416223538 0.00468689926870573 0.00288511431938255 0.00352159260185869 0.000347064720315808 0.000215601072171917 1.53444422664672e-05 0.00229513343305375 0.000930803849519927 0.00198526198464142 0.000248955020919855 0.000343797025110344 0.000270456690808388 5.51809781677623e-05 0.00096692290578913 1.30162594675457e-24 NM_001075437.2 GABPA Bos taurus GA binding protein transcription factor, alpha subunit 60kDa (GABPA), mRNA. 0.0 2785 100.00 0.313045242442686 NM_002040.3 GABPA Homo sapiens GA binding protein transcription factor, alpha subunit 60kDa (GABPA), transcript variant 1, mRNA. 0.0 4762 81.62 0.999594238182187 TCONS_00002947_1 sp|Q06546|GABPA_HUMAN GABPA_HUMAN GA-binding protein alpha chain; 0.0 927 98.68 0.997797356828194 3 coding 0 1 0 1 -0.0147262559192197 0.903383490226664 0.0286737221798513 0.682038561859353 TGTTGTAGTTTCTCTGCGCCGTTTTCGCGGGAAGGGCCCAGGGGCCTCCCACTTCGAGTCGCGGGAGCTGCGGGTCTTACCGGGAGAGACGCTGCACGTGGAGCCCGCGCCGCTGCGCTTCTCAGCCGGCTCTGGAGTGCGGGCGGGGGCGACGGGGCCGAATCCGGAGCGGGGCTGAACTTTTGAAATACTTCAGCCATGACGAAAAGAGAAGCAGAGGAGCTGATAGAAATCGAGATTGATGGAACAGAGAAAGCAGAGTGCACAGAAGAAAGCATTGTAGAACAGACCTACACTCCAGCTGAATGTGTAAGTCAGGCCATAGACATCAATGAGCCAATAGGCAATTTAAAGAAACTACTAGAACCAAGACTGCAGTGTTCTTTGGATGCTCACGAAATTTGCCTGCAAGATATCCAGCTGGATCCAGAACGAAGTTTATTTGACCAAGGAGTAAAGACAGATGGAACTGTACAGCTTAGTGTACAGGTAATTTCTTACCAAGGAATTGAACCAAAGCTAAATATCCTGGAAATTGTTAAACCTGCGGAAACGGTTGAAGTAGTTATTGATCCAGATGCTCACCATGCGGAAGCAGAAGCACATCTTGTTGAGGAGGCTCAAGTGATAACTCTTGATGGCACAAAGCACATCACGACCATCTCAGATGAAACGTCAGAACAAGTGACGCGATGGGCGGCTGCGCTGGAAGGTTATAGGAAAGAGCAAGAGCGTCTTGGGATACCCTATGATCCCATACAATGGTCCACGGACCAAGTCCTGCATTGGGTGGTTTGGGTAATGAAGGAATTCAGCATGACTGATATAGACCTCACTACACTGAATATTTCTGGAAGAGAACTCTGTAGTCTCAGCCAAGAAGATTTTTTTCAGCGAGTTCCTCGGGGAGAAATTCTCTGGAGTCATCTGGAACTTCTTCGAAAATATGTATTGGCAAGCCAAGAACAACAGATGAATGAGATAGTTACAATTGATCAACCTGTGCAAATTATTCCAGCATCAGTGCAGTCTGCTACACCAACTGCCATTAAAGCTATAAATAGTAGTGCAAAGGCAGCTAAAGTACAAAGAGCTCCGAGAATTTCAGGAGAAGATAGGAGTTCGCCTGGAAACAGAACAGGAAACAATGGCCAGATCCAACTGTGGCAGTTTTTGCTAGAACTTCTTACTGACAAGGATGCTCGAGACTGCATTTCTTGGGTTGGTGATGAAGGAGAATTTAAGCTAAATCAGCCCGAACTGGTTGCACAGAAATGGGGACAACGTAAAAACAAACCTACAATGAACTATGAGAAACTTAGTCGTGCATTAAGGTATTATTACGATGGGGACATGATTTGTAAAGTTCAAGGCAAGAGGTTTGTCTACAAGTTTGTCTGTGACTTGAAGACTCTTATTGGATACAGTGCAGCAGAGTTGAACCGTTTGGTCACAGAGTGTGAACAGAAGAAACTCGCAAAGATGCAGCTGCACGGAATCGCCCAGCCGGTCACAGCGGTAGCCCTGGCTACTGCGTCCCTGCAGACAGAAAAGGATAACTGAACCCAGGACCTTCTGGGAGTCCAAGGTCTTTCTTAAAATGTTAGAGCAAGCATTGCTCTTCCCTTTATTACTGAATTTGAATCTTCTTTTATTTCTAGACTGTACAATCTGATGCATGATTTTTTTTATAAATATTTCATACTCTTGTGAATTTGGATCTTTTTACTTTGAGCATATATTTTAGAATATGTGTATGTTAAACAATCACCACAATGTCTCTAGGCTGGTTCATTGTGGGATAGTTTGTTAACAGTCAGAAAAGCTAAACTGGTCAGTATTAATGTCTAGCCCTACCAAAAACAGCCAGTAGCATCTGAGGATGAAAAATAAATGAAGTATCTCCAGGAAACAGTCTGGCTTAACTATTAATATTTTTGAAAATATAACTGTTTCCCCTCTCTGCTGCTTTAGATGTTGCTTTACATAAAAACCAGAAAATGGAATTTTTCACAGCTGAAGCATGTATGCCTGTTTCATCTAATCAAGCAGAGCTAAAGTAATCATATCCAATAAAATTCTAATATTAATAAAATTACTAAGAGTATCATGTTATTAAAATAATTTATGTATTTGCAAGCAAAAGACAGTAAAAAAGACTGGCAGAAGAGCAGTGCTGAAGAAAGAGATCCAGGTTTAAATCTGGCTTTACTCAAAAGCCAATTTTAAGGATTTACTGTATAGATTATTCATAATGTCAGGCCAAGAATTTAAATTATTATAAGAGAGACATTAAATCCTAATAAACCAACTATTAAAAAATTCTCAGATGATCTCTGCTTTTCCTGTCAGAGATTTAAAAATCTGAAAAAGTATACCTCAACCAGAAATAAAATTTTGGTTTAGTTTGGTTGGTTATGGCTCCCTTTTTTAAAAAATTAATTATCCTATAGTGCTGGTTTATTATACAAAACAGCTTTCATAGTCTTGTGTTTCTGATGAAGACTTTAAATCAGTCAGCAGTACTTGATCTTTCAAGACATGAGTAAATTACTTGCAAATAGTTCTAAAAGGAAAATTTGACCTCCAGTACAGGCAGTCTTCTCTTAAAATTTCCCATTTATTTAATTTTTTCCTTTGAATATTACATATGTGAGTGTACAAATATCTGTATACATGTCCAGTTGACCATCTTATATACACACACACACACACACACACACACACATATGTACACACATATAAACAAAGACATAATATTCAAAAGGGATATTTCAAAACTTGCTTAGAAATCCTTTAAAAATTAAATAATTCTTACATACATGAAACTCTTTTCCTACTACAAGCCAACACTGAACAGAAATGGCTAGAAATGTCTTTTTCTTACTTGCTTTGCTTCCTTACTTTTTTTTTCTTGGCGTTTGTTTTAAAGTATTATGCACAAATCATGATATGAGATACTTTAATCTTCTTATAGCAGAAGACTGATTCTCAAATATTACTTTATGTACTTTCTCCCTCACCATCTCCTTTAAATCCATCCCCTAAACAGCTTTATAAGAGCTCATTTAGTGCATTTAACTAACTAGGAGGAAAGGGCTACAGTAATGCAAGTAGGCATTGTTGATAGTTGCTGCCCCCCAGCACTAAATAGTGGTTTGGAAAGAACCACAGGAAGCAGGGATCTTAGGAAGAGGGAGGAGGGGGAGGTGTGTATGACCTCCTTTTCTGATAACTTCAGATCATAATATTAAGTGTTACACTGTGGGACTACAACATATTACGTCAATTCACTTTATTATTGTATCATGTCGAAGTCCTTTAAGAAACAAGCAGTAGAAAGAATAAAATCTGTAATTTCCATTTTTACCTTTTTATAAACACAGAATAGACTGACAGACTATTAGTTCAGCTTGGATGCTGTGATTGCAAGAATATCTGAGTAGAATAGCAATATGATACAGATGTTCTAGTTCAGATAACAGGTAGCTGAAAAGAGGGTTTTTCACCATCCTCTTATGGTCTAGGAAGTTGACAAGTCAGTTACAGTTTTAAAATAATAATGATAAAGTCTACTTTTCTGTTATATTATCAAAAGCTTAAAATTATTGACTTTAGACTTAAAATACTTTGAGGGAGACATTATGTTAAAGTTTTAGCCAAGATAACAGATTTCCATTATATATATCTCAACTATATGTGTATGTATTTTAAAGCAAGGAATTCTCCTAGATCTCTAAAAATCAATCTATTATTTCTTTTTTATTTTCCCCTGTGTTTCTCAGATACCTTAACAAAAATTCTTTTCACTTTCTTCCTTTTGCAGTTTTTCTTTTATTCCTTGTTATCATTTGAACAGTGAGTTCTCAAACACAATCTCATGCTGTTTCTTTTTTCTTCTTTGCCTCTCTCCATCACTTTATGCACCATAAGCAAAGAGACTAATTTCCCCAGTTGATTCAAGAAACTTCCGTTACTTTGTCTCAGCTTATAAACTGTGTCTATTGTGCTTATTGAGGTTGCAGTTATCAGAAGCCAAGTAGTCTTTTTTTTATTGAAAGATAACTTGTATTTTGAAAGAAAATATAATTTATGCTATTCATTCTTTGCTCTGATTTTATGAATAAATTTTCCATAGGAAAATTTATAGTATATCAGAGGAAGAAAGATAAAATTATTGGTCATTTCTATACCATATAAGTATAAAATAATGAAACGTTCATTTTTGTTTTAAAACTTTTTCCACATGAGATTCTCATTGAGCCAATTTTCATACATATCTGGCTAGCCTGAAGTTTAGGAATTTGTGTTGGCATCAGAAAATCAAACAGATCAGGGAAATTGCTGTGTGGTTGATTGTCACTTGAATTGACTCATCACATTTATTTTTGTGACAGTCCATGTCAGTTAATTAGGAAAGATTGTGGTTTTTTTTTTTTGCCCCTGATAAATGGTGAAATTCAAGTATGATATTTCTTTAAAGGGTTGTGCCTCCAAATATTTTTGGTGAGGTCTGCTGTTTTTCATATTCATCATTTTATGCTACTGCCTTTTAAAAAGAACTAATGTATCTTTGAAATAGCACAAAAATGTTTTAAATTTCATAATTTCAAAATAACCTGTGACTAACTTAATGTCTTCATATCTAGAGAGTATAAAAATATTGATATTTCAGTGATATTTCACTTGCTGCCAGAAAAAAATATTCTCAATCTTTTGTAAGAGGGAGGAGGATTTTTGCATACATTTTTACTCTTTAAATAAAGACACTTATACTGTCATAATAACAATTATGTATTTCTTTGTGGGTTTTATTTTTTTTTTTGTAATTTTACATAAGACAGTTATTTTCTATTTTTACTCAGATAAAAAATATTTGTGCATAAAATGTAAAAATAGTAAAATGAGAAAAATAAAACTATTATACAG EMBV3_26046 CCATTGGAGTGTCTCACATCTTTCCATCTGGGGTGAACGCTCAAGAGGCCCAAGGACTCC Gene GeneID:540564|RAD23A:NM_001082614:50_cdna Constitutive 0 NULL GeneID:540564 7 GENE RAD23A MGC140027 RAD23 homolog A (S. cerevisiae) EMBV3_02207 TAGTATTGTATGTGTCTGTATGGTCAGGCCGCTCAGGATGGCTCTTGCTCCCTGAACACC Gene BVT0102_055245 - 0 NULL GK000026.2:12580581-12799715 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00153085 1 XLOC_092850 NonCoding TCONS_00153085 XLOC_092850 NonCoding NonCoding - 26:12614964-12615301 - TSS114255 337 0.732937685459941 1 0 0.000121118989803626 0.000685798853783854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.26791106075239e-05 0 0 0 0 0 0.000752631928842644 0 0 0 0 0 noncoding CGGTACTACTTTGCTGCAGTTTTGACCTGCAGCACTAACTGTGTGGCTAGCACAGTGGAGTTCAAAGCCAGGCAGTCCCTGCTTGGTGGCAGAAAATGTTTCTCAACATATGAGTTGAATGTGTGATAATCGCACCCTCGAAGTGTATCTAATAAAGGTTTTCTGCTCCTGTTGAGACGGAGAAGTCTATAAAATCCCTAGTAACACTTCACTCTCTGGATGTAATCTTGGAAGCTAGGTTTTTAGTATTGTATGTGTCTGTATGGTCAGGCCGCTCAGGATGGCTCTTGCTCTCTGAACACCCCCTGCCTGACCAGTGCTCACTCCCCCTGCACTC TCONS_00151467 . 5' 34385 TCONS_00151467 . 5' 34385 EMBV3_38897 AGGGACGGCCTCACTTCCAAAAAAGGAATTTTCACTCAGCGCCCGGTTCCTTGACTCAGC Gene GeneID:527051|CIDEA:NM_001083449:128_cdna Constitutive 0 NULL GeneID:527051 24 GENE CIDEA MGC139339 cell death-inducing DFFA-like effector a EMBV3_10936 CTGGAGACGTGGCTCCTCATTTTAGGGATCCAATCCCAAGTTGTTCCAAAGGCTGTTTTG Gene BVT0102_172644 + 0 NULL GK000025.2:38395805-38454160 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32121 GAGGGAAGCTGGAACACCGAGGTCTAGTGCATGTCTGCTCCTCACTAACTCTATTCCCAA Gene GeneID:515552|PLEKHM2:XM_002694198:702_cdna Constitutive 2 NULL GeneID:515552 16 GENE PLEKHM2 NULL pleckstrin homology domain containing, family M (with RUN domain) member 2 EMBV3_27070 GCACTCCCCGAGGGGGCGGCCCCCTGCCAGGGCCAGAAGCCAGATGTCTGCCAACTCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41118 ATTGTGCTGTCCACTGTTGCCTCCATCCGCCTCTTTGGCTTCCATGTGGACCCATTGTTT Gene GeneID:338042|SLC35A2:NM_176640:30_cdna Constitutive 0 NULL GeneID:338042 X GENE SLC35A2 MGC134328 UGT solute carrier family 35 (UDP-galactose transporter), member A2 EMBV3_33070 CTTCCTTTTCCTGATCTGCATAGTACAATAGAATGTATGTTATATTTTTATGAATGGCAG Gene GeneID:528109|MPP5:XM_002690977:242_cdna Constitutive 2 NULL GeneID:528109 10 GENE MPP5 NULL membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) EMBV3_28726 TGTGGATCCAGGTTAGGAAACGAACGCTCTAGCCGAAACCAACTTCTCCAGCCAGGAAAG Gene BVT0102_122762 - 1 EMBV3_19017 GK000011.2:44508088-44509054 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17272 CTACAGCTGCCTCAAGTGTGAGAAGAGCTTTGGGAGAAGACATCACCTGATCCGACACCA Gene GeneID:538714|ZNF641:XM_002687345:24_cdna Constitutive 0 NULL GeneID:538714 5 GENE ZNF641 NULL zinc finger protein 641 EMBV3_39413 TCTTGCTTCCCAGACTTGACTACTGTACGTTGTTGGGCCAAGATTTTAGGGGTTCCCATG Gene BVV0102_378401 + 0 NULL GK000007.2:45962775-45995151 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37218 TATCCTGTTTCTATTATCATCTGAATTCTCTTGAGGATCAACTTCTGTGAGTATGCATCC Gene BVT0102_322658 + 1 EMBV3_22432 GK000017.2:45020365-45035093 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075286 TCONS_00075284 TCONS_00075283 TCONS_00075285 TCONS_00075282 1 XLOC_046540 Coding TCONS_00075284 XLOC_046540 Coding Coding ZNF26 17:44995401-45025451 j TSS56810 3664 1 TCONS_00075284_5 535 6 0.87826549968385 0.0002677029600239 0.00106464664951672 0.000433786978235573 0.000133536103796133 4.45092722382147e-05 0.000492079369374942 0.00029219901984538 0.000768148638758965 0.00057478092287294 5.50395294705092e-05 8.19046866282207e-07 0.000148793703558323 0.000117126986224843 6.59320994374483e-05 6.14834232037189e-05 0.000225951534916836 0.000247740891828293 0.000270206739438631 0.000235383535030277 0.000516389901457013 0.000394623790602638 0.00031672141075175 0.000357314633186053 0.000292212181922329 0.000396620829725104 0.000684269707733 0.000540489842176053 0.000267615860628813 2.31712006532274e-163 5.3049752725329e-08 XM_005217700.1 ZNF26 PREDICTED: Bos taurus zinc finger protein 26 (ZNF26), transcript 0.0 5330 99.27 0.819596069868996 NM_019591.3 ZNF26 Homo sapiens zinc finger protein 26 (ZNF26), transcript variant 2, 0.0 2320 82.64 0.608897379912664 TCONS_00075284_5 sp|P17031|ZNF26_HUMAN ZNF26_HUMAN Zinc finger protein 26; 0.0 999 89.91 0.998130841121495 6 noncoding 0 0 0 0 -0.118084208396048 0.447252480588782 -0.0147276776242108 0.769361223463147 ATGGTCTGCTTCACAGTCCCTTCATCGCCCACCACCACCGGAGGCCTCTCCCGGACCCCCAAATCTCCCTCCAGACTCCCACACCACCGACACTTACACCCAACCCTACAGACCCCAGTCCTCCAAACCTTGCCCCTCATCCCGCTCCCTCCCGCTCCGCTCTGCTCTGCCACCTCTAGCCCTTACCCCGCGCCGCCCCGCCCCCTATGCCGCCCTATGCCCCTCCCCCACAGCCTCACCCGCAACGTACCCCCGCACCTGCACCGGAATCGAAGCCTGCGCAGCAGGAAAATCCTTCCGAGCCTCCCCCAGTTCCCGGCTCCGGAGCTGGTTCGTACACACGCCGGCGTCGCCCCAGGCCGGTCCGCGCCGGGGTCATCACACGGCCCCAGTCGGACGCAGAGGCCACAAGCAGCCCACAGCCCCGTCCCCGCCCCAGCCCCAGCCCCCCACAACCTTACCCCTCTGGTCTACAGAACCGAGGCGGACGCGGCTGGGCCTCGGCAGTGTCCACGCAGAACTACATTTCCCAGAGTCCCACTCGCTTTAGAACTACATTTCCCAGAGGGGCTTGCGGCGCGCCCCCCTGAGGGACAGGTGTGCTCTTTCCTGTTGCAAAACGCTTTGTGGCTGAGCTGGGCGGGGCGGGGGCGTTCTGTTACAGAGACTGCGGAGCTAGCTGAGACGCGAAGTTATCCTGGCCCAGAAACGTCCTGTGCGAAACAGGATCTTGACCAGCTGAGCCCCCACGGTCGATCCCGGCGTAGAAGCAGCCAGCCCGGCCTCGGTCCCTCCTGCATCAGAGCTACAGAGCGCCTGCACGAAACAGCCCGGGATGGCCACCAGGTTCCCTACAGCTTCGTGTTCGGAGTTGTTGTCATTCACGGATATATCTATGGAGTTCAGCTGGGAAGAGTGGCAGCTGCTTGATTCTGTGCAGAAACACCTGTACCGGGATGTGACTCTGGAAAACTATAGTAACCTGGTGTCTGTAGGGTATCATGGTACCAAACCTGATTTAATCTTCAAGTTGGAGCAAGGAGAAGAGCCATGGATCATAAACTTCGAGGTTTCCCATCAGAGCTGTCCAGACGGTTGGGAAGAATGGTACCAGAAAAATCATAATGAATTTGAAAGTGTTCAGAGAAGCTATGCTTGTAATGCATTTGGAAAACTTCATCTGAGCAAAACCCACATTTCTTCAAGACAAAGACTCCTTAAATATAAAACACATGGAAAAAGTTTGACACAAAACTTAGCTTCAGCCACAAGCTGTCTAAGAAAGAATACTGATCAATTTCATGGGTATAAAGAATCATATTTTATTAAGCACCAAAGAACTCATAGTATAGAAAAAAACTGTGTATGTAACGAATGTGGGAAAGCTTTTCGTTGTAAATCACAGCTCATTGTACATCTCAGAATTCATACAGGAGAGAGACCATATGAGTGCACTAAATGTGAAAGAGCCTTCAGTGCCAAGTCAAACCTCAATGCTCATCAAAGAGTCCACACAGGAGAAAAGCCCTACTCTTGCATCGAATGTGGGAAAGTCTTCTCTTTCAGGTCACAACTTATTGTCCACCAGGAAATTCACACAGGAGGGAAACCTTACGGGTGCAGTGAATGTGGGAAAGCCTACAGCTGGAAATCACAACTGATTTTACACCAGAGAAGCCATACAGGAGTGAAACCATATGAATGCAGTGAATGTGGGAAAGCCTTTAGTTTGAAGTCACCATTTGTTGTGCACCAGAGAACTCATACAGGAGTGAAACCCCATAAATGCAGTGAATGTGGGAAAGCCTTTAGGAGTAAGTCATACCTCCTTGTTCACATTAGGATGCACACAGGAGAAAAACCCTATCAATGCAGTGACTGTGGCAAAGCTTTCAATATGAAGACACAACTTGTTGTGCATCAGGGAATTCATACAGGAAATAATCCTTATCAATGCAGTGAGTGTGGGAAAGCCTTTGGCAGGAAGGAACAGCTCACTGCACATCTGAGAGCTCATGCAGGAGAGAAACCTTATGGATGCAGTGAGTGCGGGAAGGCTTTCAGCAGCAAATCATACCTCGTTATACACAGGCGAACACACACAGGAGAGAGACCCTATGAATGTAGTTTCTGTGAGAGAGCCTTTTGTGGGAAGTCACAGCTAATTATACATCAAAGAACTCACTCAACAGAAAAGCCCTATGAATGTAGCGAATGTGAAAAAGCCTATCCCAGAAAGGCATCACTTCAGATACACCAGAAAACTCATTCAGGAGAAAAACCGTTTAAATGCAGTGAGTGCGGGAAAGCATTTACTCAAAAGTCATCTCTCAGTGAACACCAAAGAGTTCATACAGGAGAGAAACCATGGAAATGCTCTGAGTGTGGGAAATCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGAAAAACTCATAAGTGAGAAATCAGAACAGAATAAATTTGGATGCATACTCACAGAAGTTGATCCTCAAGAGAATTCAGATGATAATAGAAACAGGATATATAAGTAGGAACACCTAAAAGTACATTCTAATCAAATTAGTCATGTGGGAGAGAGACCAATCATATTTGGAATGAATATGCAAAAGCTTTCAGAAATAAGTCATGCAAATCTTTATACACAGGAGAATGGTTGAAGGAATAAAGAGCAGTAATGGTATCATATACAGTAGCATAATTATGAAGATTTAATTTGGGAAATGCATATTAAGTCCATATGAATTTAATAAATCAGGAAAGCACTTTTCCACAGAAGATGTGTTACATGGGGAGTCATGTTCCAGATTTGATGCTGTTTTTGAGTGAAGAAAGTCCTTGGTGGAGGATAAAGTAGTTTTGTTTTATTTTTTAATATGTAACTAATAGGAAAATAGCAAAGAACGTATTTTGAAGGTTCAGGGGCATGGAGTGTGACTTTCCTGAGTAATACTGCATAGCATTTTTTTTAATTTTGGTATTTTATTTTTAAATGTAACTTGTTATATTTGATAATTTGTGGAATAACATCTTCCAATATTCTTTATATTAAATGCTAAGTATCAGTATTGTCTCTTTATTTCTTAGCAATATAACTAAAATAGTTTGAATTTTAATAAATGAAAGGATTTTATCTTACTCCAAATGATTTTACTTATTCAATAAGTGGGTCTGTCCATTTTTACAGGGCTGCTTTCCAAGAGCACTCATGGTAATGAAGATTGATTGTATTTAGCAATTCGGTGTCTGCTCCCTATTTATTGATAACAGTGGCTTAGAATTCTCTGGAGAGATACTCCTCCTATGTTGTGCACATCCTTGTGGTGTATCTCTCAGGGTGTCCTTCCCACCAGCCATAGGTGAGCATTCTGCCACGGTTGAGTCATGATGACATCTTTTCCAGGAGTTTGAGTCTCTAATTCAGTCTCACATGAACCAGAAGGGAAATATCAGAATTCATTCTTGTACCACAGTTTTAAGACCATCAAATAGTTCCTGCTATTTCAATTTCTCAGGATAACTTTGGATATTCTGAACCTAATTTTCTGGTGTTCTGTGCGCTTCCTCATATTTGCAATAAAAATATTATTTTCTGCTAATGTTAAGAAGAATGAGTTCTATTTCTTGTAACTGAAAGGCTTTAATTGGTAAATAGTGTCACTGG EMBV3_03237 ATACCAAGGGATGGCGTGAAAATACCTGGTTATGGGGATGGAGTAACACAGGTCCAGTGG Gene BVT0101_023935 + 0 NULL GK000007.2:20584239-20644475 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215946 1 XLOC_131125 NonCoding TCONS_00215946 XLOC_131125 NonCoding NonCoding - 7:20636510-20637778 - TSS161173 745 2 TCONS_00215946_2 58 0.72751677852349 3 0.414364640883978 0 0.000950892857677677 0.000658338072388799 3.34395116264435e-05 0 4.80141497434904e-06 2.34833856823488e-05 0.000905071248240732 0 0 0 0 0 0 0 3.5451796644109e-05 0 0 4.81270283114331e-05 3.86116850167135e-05 0.000313759719308269 0 0 0 0.00055334844309888 0 0.000110104811453076 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 6e-53 212 75.56 0.413422818791946 0 noncoding 0 0 0 0 0.142522586402179 0.25423043602382 0.0497547621250743 0.62562385460951 GTCACATGGGCCTGCTCGCTGTCCCTCCACCATACGAGTATGGGCTCAGGAAACATGTGTTGAAATTACAAACAAATGAATAGCTGCTCAGAGGAGAGAAAATACCAAGGGATGGCGTGAAAATACCTGGTTATGGGGATGGAGTAACACAGGTCCAGTGGTTAAGATTCCGCCTGCTGGGGCTTCCCTAGTGGCTCAGTAGTGAAGCGTCCACCCGCCAATGTAGGAGACTCGAGTTGGATCCCTGATCCAGGAGGATCCCACATGCCGCAGAGCAACTCAGCTCACTGGCCACAGCTATTGAGCCTATGCTCTAGATCCCGGGAACCGCAACTACTGAAGTTCGGTGCTCTCGAGCCTGTGCTCCACAACGGGGGAGACCACTGCAGTAAGAAGCCTGCGCAGTACAATGAAGAGTAGCCTCTGCTCGCTGCAACTAGAGAAAAGCCCACACAGCAGCAAAGACCCAGCACAGCCAAAAATACATACATTTTTTAAATTATTAAAAAAAAATGAGCCTGCCAATGCAGGGGATACAGGTTCCATCCCTGGTCCAGAAAGATTCCACATGTCACAGGACAACTAAGCCCACACGCCACAACTACTGAAGCCTGCGTGCCTAGAACCTGTGCTCTGCACAAGAGAAGCCACTCAATGAGAAGCCCACCTACCCCAACTAGAGAGTGGCCCCCACTTGCTGCAACTAGAGAAAGCCTGAGCACAGCTATGAAGACCCAGCCCCGTC TCONS_00212356 r 5' 4596 TCONS_00212356 r 5' 3921 EMBV3_04991 TGTTCTGCTGGATTCAGAGCTCACGTAGGTTTTGGGGGTCACACTTAGCTGAGGCTGCAA Gene BVT0102_215597 + 0 NULL GK000003.2:15663275-15667480 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172163 TCONS_00172165 TCONS_00172164 TCONS_00172161 TCONS_00172162 1 XLOC_104048 Coding TCONS_00172162 XLOC_104048 Coding Coding CKS1B 3:15665442-15670907 j TSS128295 2364 4 TCONS_00172162_1 57 0.307952622673435 3 0.56789897510981 0.0261123525120062 0.0166519017423459 0.0263278039373586 0.0169794775306087 0.0168852714902698 0.00709195275190081 0.017356029060975 0.0205396195256368 0.0161190387782076 0.0081483881845908 0.00191576371683054 0.00175129604624522 0.00406091225466221 0.00729370769623764 0.00618232871811678 0.0159077038288987 0.00681165345570037 0.0121062244633407 0.0212967999103335 0.0239144133254443 0.0131589827303174 0.00668201550532407 0.00718366136636806 0.00909792850083657 0.023254593081065 0.0229318435322028 0.0171406564562827 0.00280989410289571 0.00130869646942807 0.00494045946015071 NM_001113311.1 CKS1B Bos taurus CDC28 protein kinase regulatory subunit 1B (CKS1B), 2e-154 551 100.00 0.128595600676819 NR_024163.1 CKS1B Homo sapiens CDC28 protein kinase regulatory subunit 1B (CKS1B), 0.0 780 86.76 0.277918781725888 TCONS_00172162_1 sp|Q0P5A5|CKS1_BOVIN CKS1_BOVIN Cyclin-dependent kinases regulatory subunit 1; 7e-36 119 100.00 0.982456140350877 1 noncoding 1 1 0 0 0.283290798125273 0.166347355188996 -0.624858895082714 0.000315088202082183 CCGGCGCGGGGGCAATATCAAGGCATGTCATGTTGCCCAAGGACATAGCCAAGCTGGTCCCTAAAACTCATTTGATGTCTGAATCTGAATGGAGGAATCTTGGTGTTCAGCAGAGTCAGGGATGGGTCCATTATATGATCCATGAACCAGAACCTCACATCTTGCTGTTCCGGCGGCCACTGCCCAAGAAACCAAAGAAATGAAGCTGGGGAGCCACTTTTCAGCCTCAAGCTTTACACAGCTGTCCTCACTTGCTAACATCTTCCTGATGACATTATTGTGTTGCCTTCTTGTTTCTCACTTTGATATTTAAAGGATTTTCAATACACTGTATGTGCTGGTGACTGCTTTGCTTCTTGAGCAGAACTGACAGGAAGGACCACAGCCCAGCTGGATGAGTGAGTGCTCTCTGGGTTGCAGCCTCAGCTAAGTGTGACCCCCAAAACCTACGTGAGCTCTGAATCCAGCAGAACACGCTTGACAGATGGAGAAAGCATCTGAGAAGAAGACCACGGCTATTCCAGGGATTGCGTAAACTTGGCTGTTTTGGGTTTTTTCCTGCCAGGTGTTGTGTGTATGTTGATTTATGTTTCAGTATATTGGAAACTTTCCATTTTATTCCAAGAAATCTGTTCCATGTTAAAAGCCTTGATTAAAGAGGAAGTTTTTATAATCTAATTCTCTAATTGTTAAAGTCCCCCCCCCCCCTCAGGACATCACCCTCACTATTATGGTTCTAATTATGCTCTTCAGTAAGATAATGAAGCTCGGCTCTTTGTTAACACTGAGGTTTCTTTCAACATTGAAGTTAACTGGTTTGTAATCTACTTTAAGTAGACTTTGCTGTCAAATATCTACTGAAATATATTTCACTCTAACTACAGGCCTAAGAGAGGTTATATAGGGACAACATCATCTCATCAAAACAAATCAGTTGTTTTCTATGGTCGGGTACTGCCATTAACATAGTCTGAGTTTTTTTGAAGGGCATACAAGAGTTCTTGGGGCTTCCTTGGTGGCTCAGACAGTAAAGAATCTTCCTGCAATGCAGGAAACCCAGATTCCATCCCTGGGTTGGGAAGATCCTCTGGAGAAGGGAATGGCTACCCACTCCATTATTCTATTCTTGCCTGGAGAATTCCATGGACAGAAGAGCCTGGCGGGCTATAGTCCATAGGGTCACAGAGACTTTACACTTATCAAGGGTAAAGTGGGGCTGCTAGTATACTCCACTTCCTGACCAGCCTAAGGCTCCGGCACACCTATGGCCTGTTCAGTCCACAGAGTGGTTTGGGAGTGTTTTCAGTGGTTCTCACTTTGGCCAAACATTGGAATCACCTGAGTAGCTTTAAAGTGCTGATACCTGAGTCATTCCCAGGGAAGTGGACTTAATTGGTCTGGGGTATGGCCTGGATAAGGGGATTTCAAGCATTCTTAAACAGGTAGTTACTGCACTGAGCTTTGAGAAAACGGTTGTAAACTGTGGCCATTTAAGAGGCATTTTGCCAAATAATAGCTTACTTTCTACTTTTAATAGTAGTGTTCAGTAAGGGAGATTAGTCTTCCCACTTTCTCTTAATTTTTCACTCATTTATTCCTAGAGCAGTCATAGTCAGCGTTCAGGTGTGGTCCCTGGTCCGGAAGCATCAGAATCACCTGGAAACCCAGAAGTGCTCATTCTTGGACTCCACCCTAGACCTACTGAATCAAACTCTAAGGGTTGGACACAGTGACATTTTAACAGGCTCTTTAGGTGCTTCTGGTGCACACTTAAGTTTGAGAACCCACTAAAAGACTCAGAGCTGATGTTGATGGGTAGGGAGGAGGCATTTCAGGGAGGGGCTTGTCAAATATCACCATGATTATTAAAGATACTGTAGCATATGGCTTATGCCATTAGGAAAGCCCAAGTTTGTTTTTTTAGAGTGGAGACTCTCTTAATTGGAAAAACAAAACTGGGCTTATTACCTGAAGGTTCTAGAAGCCTGGCTCTATCATTCACTGAAGTGTTTTTGTGGGGTTTATGTGGCATCTCTTCACCTTTTTGAACCTGTTGCCCATCTGTAAAATGGGCATATCTGTCTCAGAGGGGTTTTAGCAGAGTAAAACGAGGCAGTGTGGCTCAGTTCTCCACATGAAATTTTAGACCTTTACTACAAAAAGCAATGGCATCAGCATGACAGGAGCGTTTGTTAAATGCAGATCTCTGGCCCCACCCAAACGGCCAGAATCCTGTAGATTTAATCAGCATATTAAAAAGGCCCCCAGACGATTGACAGGAGTATTAAGTACTTTTAGACCAGAGGCAAAATAAGTGGAAGCTGAGAATCCAAAGTGGACAGTGGCCCTCCCTTTGTCGCTGCC EMBV3_20272 ACTTATTACACCGCCTGGGTAATTCTCTTGGTATATTCATCACCTACGTGATGCTGAAGA Variant GeneID:523737|DPM2:NM_001046268:121_cdna 115^217 2 EMBV3_04643 GeneID:523737 11 GENE DPM2 MGC137183 dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit EMBV3_04873 GCTTCGGAAACAGAGCACCTGAGGCGACAGGTAGCACTAGCAGTGGCCTTGAACTTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27303 CCAAGGTTTGGATTTCAGCTCCACCTCTTTGTGGGCTGTGTGGCCTTGGCAGATAATCAG Gene GeneID:618508|MAVS:NM_001046620:1354_cdna Constitutive 0 NULL GeneID:618508 13 GENE MAVS MGC137656 VISA mitochondrial antiviral signaling protein EMBV3_06889 CTCTTCCCAGGGGCCCATTTGGCCAGGCTTGCCCCATCGAGGGCAGGAGTCCTAGGTGGT Gene GeneID:516932|LRRC68:NM_001105379:238_cdna Constitutive 0 NULL GeneID:516932 18 GENE LRRC68 NULL leucine rich repeat containing 68 EMBV3_42572 GCGGGCTGGAGATGCAATCGTCAGCCGGGCTCTCCGCCTTGGGAGACCAAGGTCTAACAA Gene BVT0102_343139 + 0 NULL GK000003.2:19698697-19717291 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25846 ACTCCTTCTCAGCTGCTGAGGAATGGGGGAGCTGGAAGGAACATACAGAGTCCTGCAGAC Gene GeneID:100297153|LOC100297153:XM_002686596:69_cdna Constitutive 0 NULL GeneID:100297153 3 GENE LOC100297153 NULL similar to FERM, RhoGEF and pleckstrin domain protein 2 EMBV3_42327 TTGAGATCAACGAGGCCTTTGCTAGTCAGGCTGTGTACTGTGTGGAGAAGCTGAAACTCC Gene GeneID:508324|ACAA1:NM_001034319:59_cdna Constitutive 0 NULL GeneID:508324 22 GENE ACAA1 MGC128200 acetyl-Coenzyme A acyltransferase 1 EMBV3_28801 CCGGGTCCCAATGATAAGAAATCAGAACTGCTGTCCTGGAGCTGCCACCGCGGGCCCCTT Variant GeneID:617807|PSMF1:NM_001076478:1330_cdna 282^971 3 EMBV3_31497 GeneID:617807 13 GENE PSMF1 NULL proteasome (prosome, macropain) inhibitor subunit 1 (PI31) EMBV3_09265 TTTCTATGTACTGCCCCTGGATGTGGCCAGATCAGACCCCAACACCAACAAGATTCTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39985 TTGGGGTGTGGTGGGAGGGAAATGGACAAGAGGCAACACAAGCTGTCTACCAAGAATAAA Gene GeneID:510826|DDX52:NM_001103238:238_cdna Constitutive 0 NULL GeneID:510826 19 GENE DDX52 MGC139436 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 EMBV3_36403 CCGGCACTTGAAAAGGCTGGAGCGAGTTATCATTGGTTACTTGGAGGTATATGATGGACC Gene GeneID:535350|C27H8ORF41:NM_001099069:4_cdna Constitutive 0 NULL GeneID:535350 27 GENE C27H8ORF41 MGC148735 chromosome 8 open reading frame 41 ortholog EMBV3_03921 TAACGGAGTTAAACCTACAGAAGGGGCAGGGTTACACTTTTATGGCCATGACTATAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04469 CAATTGGACATCACATTAAGACGGGGTCAAAGTTTAGCTGCCCGAGATCGAGGAGGGACA Gene GeneID:533635|MCTP1:NM_001104987:14_cdna Constitutive 0 NULL GeneID:533635 7 GENE MCTP1 MGC157203 multiple C2 domains, transmembrane 1 EMBV3_01811 GCTCCCGAACTTCTTGTGGGGGATACCCAGTATGGTTCTTCAGTCGACATATGGGCTACT Gene GeneID:517478|CDKL4:NM_001038129:116_cdna Constitutive 0 NULL GeneID:517478 11 GENE CDKL4 MGC133738 cyclin-dependent kinase-like 4 EMBV3_43350 CGGAAGAAAGTGAGGGATGGGCGAGAAGAAACATCTGGAAGATCAATAGAGTCGATGCCC Gene GeneID:520462|SH3BP4:NM_001144088:26_cdna UTR3_Alt 2 NULL GeneID:520462 3 GENE SH3BP4 NULL SH3-domain binding protein 4 EMBV3_16013 TAGAAACTTAGTAGGGTGCATGGGTTTCAAAACCCGGTTGGCCGCCCAGGCAGCAAACAA Gene BVV0102_203716 - 1 EMBV3_29613 GK000007.2:88995994-89281001 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26845 TCAGTGTGAGGAGGAAGACTTGAAAAACCAAAGGAAGGCAGCCCTGGAGTACTGTGGGGA Gene GeneID:281812|FGFBP1:NM_174337:4_cdna Constitutive 0 NULL GeneID:281812 6 GENE FGFBP1 FGFBP MGC151907 fibroblast growth factor-binding protein (FGF-BP) EMBV3_09038 GACCACAGTGCTCACCACCCACCACCACTGGTGGGGTCTCTCCATGTCAAGTGCCTGTCG Variant GeneID:509274|HAGH:NM_001035274:111_cdna 373^490 1 EMBV3_30402 GeneID:509274 25 GENE HAGH MGC128610 hydroxyacylglutathione hydrolase EMBV3_00855 ATGCAGTAAAGACGGTAGGAAAAAAGTGTTATCTGGGGAACTGAAGAAAAATTGAGCCAG Gene GeneID:615690|FAM3C:NM_001099147:70_cdna UTR3_Alt 2 NULL GeneID:615690 4 GENE FAM3C MGC142886 family with sequence similarity 3, member C EMBV3_05322 ATCTTACACACTCCCAGATGGCCGCATTATCAAAGTTGGGGGAGAGAGGTTTGAAGCACC Gene GeneID:788019|LOC788019:XM_002695246:210_cdna Constitutive 0 NULL GeneID:788019 18 GENE LOC788019 NULL similar to Actin-related protein 2 (Actin-like protein 2) EMBV3_06860 ACAGGCGCCCTGGACTGCTCAACGATGTTGTGGACTTTGGAGTCAACCTTGTAAGACAGT Gene GeneID:286882|SPLUNC2A:NM_174803:779_cdna Constitutive 0 NULL GeneID:286882 13 GENE SPLUNC2A BSP30A common salivary protein BSP30, form a EMBV3_14225 AGCTAAAGGGCCTGAATCTGAATGGTGTTACCTTGACCAATTTTCATCCTGAGCTCCTCC Gene GeneID:525100|LOC525100:XM_002694074:288_cdna Constitutive 0 NULL GeneID:525100 16 GENE LOC525100 NULL similar to PRAME family member 8 EMBV3_04506 GTTCCAGAACCGAAGAGCCAAGGCGAAAAGACTGCAGGAGGCAGAACTGGAAAAGCTGAA Gene GeneID:540230|MSX2:NM_001079614:151_cdna Constitutive 0 NULL GeneID:540230 20 GENE MSX2 NULL msh homeobox 2 EMBV3_16975 GTGGCTTCTCTTGTTGTAGAGCAGGGCTTTAGGCACATGGACTTAGCAAGCACGTACACA Gene BVV0102_291813 - 1 EMBV3_04428 GK000018.2:52334545-52357102 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38190 CTTGAAAAGAATAACCCAGACCAGGCAGGGAGATACACCAAAGCAGTAGCCTCTGAGAAG Gene GeneID:531149|MPHOSPH10:NM_001046317:45_cdna Constitutive 0 NULL GeneID:531149 21 GENE MPHOSPH10 MGC137567 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) EMBV3_12559 TCAAGGGTGAAGTATTATTGGTTCCCATGGAAGAGAGGTGCAGAGCAGTTGGCAGGGTGG Gene GeneID:613429|MGC128199:XM_002688551:178_cdna Constitutive 0 NULL GeneID:613429 7 GENE MGC128199 NULL hypothetical protein LOC613429 EMBV3_13406 GTCGGTAGAAGTTGGGGCTCAAACCCCCTAGGCCTCTCTGGACAGTATTTAAGAGCTTCT Gene GeneID:541270|WDR33:XM_002685211:80_cdna Constitutive 0 NULL GeneID:541270 2 GENE WDR33 NULL WD repeat domain 33 EMBV3_29689 TTGTGCCGATGGATTGTTGCGGGTTTGGAGCCTGGTTGTCACTAGATCCGCTTTGCAATC Gene BVT0102_224000 - 0 NULL GK000018.2:42371991-42749251 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083254 1 XLOC_051215 NonCoding TCONS_00083254 XLOC_051215 NonCoding NonCoding - 18:42631278-42634181 - TSS62612 2903 5 TCONS_00083254_6 65 0.0768170857733379 1 0 0.000112482411767842 0.000204221836117428 0.000242983736330191 0.000117282241287161 2.47451794681076e-05 1.23219286887004e-06 0.000102451709233689 0.000678471165990511 2.94798755052703e-05 9.92130655766677e-06 0 0 8.00591211665315e-05 0 6.76020235702828e-06 1.81960620791317e-05 5.71900021843661e-06 0 0.000331004755574256 4.95448766842792e-05 1.25486980337077e-05 0 0 0 7.87597462810528e-05 1.21347976361153e-05 0.000131190042094111 0 0 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 1e-61 242 85.32 0.0744057871167757 0 noncoding 0 0 0 0 0.0859599873515009 0.464929290406659 0.0605362536051943 0.252336260190609 GTGAATGGGTGGGGAAGACAGTTCAGTTGTTCACAGACTCCAGAAGAGGTAAAGCAACATCCTTCAAATGGAGAGACAGAGGAGAAAGTGATGCTCCAAACATGCCAGGCTGCAAGCTGGCTGGCCCACCCATCAGAACGCTGGGCTGCTTGGCAGTAAGGACTGGGTCAGAGGTCAGAGGCAACCAGACCCTAATCTGCCTGGAGGACAAAGGCTCCTGATCCCTGGACAGAACGAGTCCACATGTATTCATCAACCAAATGGAGCCAGGTAAGAGAGCAGGCTTGATGGGTTCAGGCCTAACTCAGGATACCAAGACTTCTCCACCCTAAATCCCCTCTGTAGTCCTCCCCTGATTAACTCTGTGGCCAGGTTCCTTACACACAGGGGCCACCGTGCAGGAGCCTGAGTGGTAGAGAAAGTTCCTAAGTCTCTGCAGAGGGAAGCCTGCTGGAGGAAGAGGAGCAATGCAGGGCCACCAGCACAGAAAATTTGATGGGGCTGGAAAGCCCCCGAGAACCAAGCAACAACAGAACTCCTGCTTATGGACGGTTCACCACGTGCCAGACACCAGTCTTGTTGCTGTGCATGTGTGAACTCAGTTTAACCTTCACCATCACCCTGTGAAGGGGGGCTCCACGTTTATCCCGCAAAGGAGTGAAGTATAATAATTTGGCCAGAATCTCAGAGCTGAGAGCAGTTGGCAGGGAGTCCACACCGTGCTAACTACTTAGTTAGTGCTCTGTCACTGAAGAGGGTGTCTGGGCGCCCAGGGATGAAGACCATTACAAGGAGATATGAGGACAGAGGGTGGGCCCAAGATGCGAATCGGACCACCTGTATATTGTGTATAGAATAGTGATGATGATGATAAAATAAATCCATGCCCATCAACAAGCTTAAAAATGGACGCCCAACCTGAGCAGTGCTTCATTAGTGAGTTTCATGAAGTGTGTGCCTGCTAAGTTGCTTCAGTTGTGTCCGACTCTTCGTGACCCCATGGACTTTAACCCACCAGGCTCCTTCATCCATGGGATTCTCCAGGCAGTATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGGATTCTCCCCAACCAAGGGATTGAACCCGAGTCTCTTATGTCTCCTGCACTTGCGGGCAGGTTCTTTACCACTAGCGCCACCTGGGAAGACCGGGCTTCCCAGGAGAGAAAGGCTCAAATGCAAATGCAGTTAAAGTGGTTATAAGGCAAACATCGGGGGGCGTTTGACAGTGTAATTCGCTGGACTTCAGCCCCCAGTCGGACACGGGAAAGTCATTGCAGTCAATGACCAAGGCTTCAGCTCCTTTTCTCCAATATTCAACAGCCCTGTGATCACGCTGTCATCCCACAGTTAGAAAAACAGCAGGACAGGCACCACCAGAGCCCGCTGCCGGCAGGCGGGCCCTCCTCATGGACCAGCTGTGCCCCTCGAACACCGTCACTGGCCCCAGCAGAGTGGAACCTCCTCGCCCCCACTTCCCACAAGACACAGGGAGTATTTGTCAAGTGGCCCCTCCCTTGTCTCTGGCTCCGGAGGGAAGGGGCCAGGGAGCAGGGGACAGAGAGGGAGGGCCGAGTCCGGAAGAGGACATGGCTTGTTGAATCCTAATAAATCACAGCAGCCCTGGGAGGTGGAAGCAACAGGGGACGGCAGGCTAGCCGAGTTGCACATTGACCCAAGGCAGAGCTCGCAGAGAAATGATGTCCTGTGCGGCAGACTCCTGGAGAGATGGTCTGCATTTCTTCTGACAAATTAGAAGTGCCCTGAATGCAACCATTCCTCAGAAAATAGGCCTCATGTAGCAACACGCAAGCTGCCATTATCCCACTGCATAAAAAGACCATTTAAGCGGGGCAGCCTTTAGAACACTGGCCCGCTGGAGGCAGCATTTCTGAAAAATTACCCCCTCGACTGCCACCTAAACCAGTCGCTACCCAAGGGAGAAGCCTCATTTACAACCTAGAAGACTGAGCAGGCTTTCATCAGAGAAAAGGCCTTGTTTTTCTTCGGTTTCTGTGAGTTTCCTGCACCCCGGGAGTCCCCAGTCCGTGATCTCACCCCACCTCTGATGCCAAGTCAGGAATTACAGCGTGGGGACCACCTGCTCCATCCCACCCTCTGTTATCTCGCCCTGTTGGGGCAGCCAGAGCCCTAACCATCCTCACTGAATACCAGACCGATTGCAAAGCGGATCTAGTGACAACCAGGCTCCAAACCCGCAACAATCCATCGGCACAAAGAGTTCGTGTTTGAAAACTTTACACGCAAAGATTACAACCTGTCATTCTGTTCTCCAGAGACGCACTACCTTTTGCAAAACTATCTCTAATGAGATCTACAAATCTATGTTGAAGACAGCTGACTTTATTGTGTTTGTAAAGAGGAAAATGTTTTAAATAGGTTACGGCTCCCGGGACTGATGGCCCCACCGTGAGGGTAAGGTCATTTTGGAAATGTTAATAAAAGTTTTCATAAAATATGACGGCACTCAAAGAGTAATGTTTGGATGTAAAAATAACTATAAAAGTATCATTTCTACCAGGGTACACACGCAGTTTTTCTGTGTCAAGACATTTGCCCAATTCCTCATTTAATAGAGGTTACAGCTTTTCCAGCTGTTTCGACAGCCATGCTGGGATTCGACCCTTATTTGTCAGGGCTGCAACAGCCTTTCCCAGGCCTCCCCATTATATTAGAAATCATCTTGTGAAGCAAAGTCTTGCACCTGACCAGTAGGCTAACAGATTAGCTCTCAACCTGGGGTTGACTCACCCCGCTGTGGGCAGGGTCCCCTCACACACTGGAAGAGAGAGAAATGAATGAGGAGGGGAACTCTGGGGGCTCCGCCAGAGAGTCCCTGGGCTAGTCTGTGGGGAAC TCONS_00083257 s 5' 395890 TCONS_00083257 s 5' 398792 EMBV3_04884 TGCGAATCCCAAATCCGGTCCCACACTGGCTGGTAGGCGTACTGATTCTACTGTGTGTTT Gene BVV0101_001371 + 0 NULL GK000002.2:129018365-129041412 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106805 TCONS_00106807 TCONS_00106808 TCONS_00106810 TCONS_00106806 TCONS_00106809 1 XLOC_062895 Coding TCONS_00106806 XLOC_062895 Coding Coding NIPAL3 2:129037628-129094662 j TSS78529 5249 1 TCONS_00106806_2 406 0.0224804724709468 12 0.908175968299055 0.000584202976084802 7.51207939715315e-29 1.4569725873658e-06 0.00018392570131528 0.000688441019315384 9.17927310023928e-05 1.70145818951714e-08 0.000370727564846574 0.000172854114849824 4.61876662498591e-05 1.71548618174847e-06 8.21786420041881e-07 2.07229552794648e-13 3.37155987740602e-06 0.000330615037986322 0.00360586457611372 0.00389492944313719 0.00291469273549595 9.94936486876391e-05 6.50490565322997e-05 6.12388227268971e-16 0.000921131493483803 0.0020795823996106 9.33829005835567e-12 0.000756466369315523 4.51245933426773e-12 0.00109717662765744 2.09688501282142e-05 4.24739325572416e-05 5.03108091899596e-05 XM_005203249.1 NIPAL3 PREDICTED: Bos taurus NIPA-like domain containing 3 (NIPAL3), 0.0 9461 100.00 0.999237950085731 NM_020448.4 NIPAL3 Homo sapiens NIPA-like domain containing 3 (NIPAL3), mRNA. 0.0 2248 78.32 0.514955229567537 TCONS_00106806_2 sp|Q6P499|NPAL3_HUMAN NPAL3_HUMAN NIPA-like protein 3; 0.0 753 93.84 0.997536945812808 1 coding 1 0 1 0 -1.75195739039455 0.0189096629572325 0.0256973798032136 0.590125887200215 CGAGGGCACCACGAGAATCAGGAAACGCGTCCCCGTCTGCCTGCCTGAGAAGAAACCTAGAGACTGGCACGTCTCTGAGTGAAGATGAGGAAAAGGCTGTAAATTGGCCAAAAGAGCCTTGCAGTACTCTTTCCACGTGAGAAGGCGATGGCTGGTGGAAGGAGGTGAACCCCGCCGGGAAAGATGGCTTAGCAGCACCTCCAGCTACGGATCCAGGCCAGCTGGTCTGTGCCCTTAGCCCGCCATGGACGGAGCTCACGGTGCAGCCCTGCAGCTCCAGCAGCTCCTGCCCACAAGCAGTGCCAACCCCGTGAGAGAGGCTTCCTTCTCCTACAAGGAAAACTTGATCGGTGCTCTCCTGGCCATTTTCGGGCACCTTGTGGTCAGCATTGCACTGAATCTCCAGAAGTACTGCCACATCCGCCTCGCAGGCTCCAAGGACCCTCGGGCCTATTTCAAGACCAAGACATGGTGGCTGGGCCTGTTCCTGATGCTTCTGGGCGAGTTGGGCGTGTTTGCCTCCTACGCCTTTGCTCCTCTCTCTCTGATCGTGCCCCTCAGCGCTGTCTCTGTGATAGCCAGCGCCATCATAGGAATCATATTCATCAAAGAAAAATGGAAACCTAAAGACTTCCTGAGGCGCTACATCTTATCCTTCGTTGGCTGCGGTCTGGCCATCGTGGGTACCTACTTGCTGGTGACATTCGGACCCAACAGTCATGAGAAGATGACAGGCGATAACATCATCAGGCACCTCGTGAGCTGGCCTTTTCTCCTGTACATGCTCGTGGAGATCATTCTCTTCTGCCTGCTGCTGTACTTCTACAAGGAGAGGAACGCCAATAACATCGTGGTGATTCTCCTCTTGGTGGCCTTACTCGGCTCCATGACTGTGGTGACGGTGAAGGCTGTGGCCGGGATGCTGGTCTTGTCCATACAGGGGAACCTGCAGCTCGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCGACCGCCATCTATCAAGCCGCGTTTTTAGGTCAAGCCTCACAGATGTATGACTCCTCTCTGATCGCCAGTGTGGGCTACATTCTGTCCACCACCGTGGCCATCACAGCAGGCGCCGTCTTCTACCTGGACTTCCTCGGGCAGGACGTGCTGCACGTCTGCATGTTTGCACTGGGGTGCCTCATCGCGTTCTTGGGCGTCTTCTTAATCACACGGAATAGGAAGAAGGCCATTCCCTTCGAGCCCTATATTTCCATGGATGCCATGCCAGGTATGCAAAACATGCATGACAAGGGGATGACCGTCCAGCCTGACCTCAAAGCTTCTTTTTCTTACGGGGCCCTGGAAAACAACGACAACATTTCTGAGATCTACGCTCCTGCCACACTGCCCGTCATGCAGGAAGAACATGGCTCCAGAAATGCCTCTGGGGTTCCCTACCGCGTCCTGGAACACACCAAGAAGGAGTGAGCCCGCCTTGAAGGAGACCCCTTTCCTCTATTCACAGCTGCTCAAGCGGTACTGACAGTGGTTCAATCCTTAATTCTAAAACTTGCCTTTCAAGTCTTTTTTTTTTTTTTTTTTAATCCACGAACTCTGTAGACGAGCATCTCGAAAAGCCTTTGCCTCAGACAAAGAATAGATTACCTTGGTCCTGGAAATTTCAAATGATGAGGCTGGGAGTGGGGGGATGAAAGCAGTGTTCTAGGGAGGCAGGACAGTTCAGCCTCTGCCTGCTTTAGCCCAAGCAGACTTGGAAAGCCTTCCTCATCTGCGGATGGTACCTGGGCTTTCCCAGGCATGACCAAGGGTGGCCATGTTCTTCAGAGCTAAAGCCAGGCAGAGGTTCTGCCCCTACTTTCCAAATCCACTGAAAGGCTGGAAAGCTCTAGATCTAGTCTTCCCTCACCTCATGTGCAGCACCGATCTCTACCCACCTCCCTCTTGAGTCTGTACTTGTGATAACCTTCGTGTCACCTTCTCGTGGCATGGTGAGCCAGCCCCGGCTGTCACATTCTGTCACTCACCGGTAAGGAGTTCACATCTGCTTTCTGAGTGTCTGTGCCTCTCCAGGGAAGATGTGCTTGATGTGTTTGTACTGGGTTCTTTCTGGAAACTAATTTGATTCTGGTTCTGCTGCTAATTTTTTGCCCTCAAGGGAACTGAGAAATTAAGAGAAGGGAAAGAATAAGAAAGAGTAGGAGTGATGAGACTTCAGCCCTTAAAGGAAGAAAAATCCCTTTCATTTGACAAGAGGTGACTGCATCACTTATCAAAGGACAGACAGACAATCTGGGTGTTTTGTGTTGCATTTTCCTGTACACCAGTGCCCTCTGGGAAAACTAGGGGGGTGGAGGGGGGAGGTGCTTATTTTAGAGACAGCCTTGCTCACTTCTCCTCCATCCTCTCCTGTATTGATCGACTAACCAAGCTTGAGTCATTGGCTAACTTCCTTGGGGTCAATAGACTCTTTGGGTCCCCATACACATACATCCTCGAGAAGCAGGAATTCTCAGAAATGGGGCTGCTGCCGGCTGGCTGCATACACAGCTGTCTTCCCTTAGGCTGACTGTATACTTCTGAGAATAGCAGCTAAAGTTCTGTAAACTTTAATGAGAGTAAGGATCCCTTAGGGAATTTATTTAAAACGCAGACTCCCACACCCCAACCTCAGATTAAGTGGGACTGGGACCAGGCCCAAGCATTGCATTCTTGGGACTTTCCTGGTGGTCCAGCGGTGAAGACTCCACACTTTCAATACAGGGGCACAGGTTGGATCCCTGGTCCAGGAACTAAGATCCCACAAGCCGAGTCGCGCAGCCAAAAAAAAAGAGTCTGCGTTCTGAACTGGCAGCGTAGGTGATTTTGAGGCTGGTAATCCAAGTATCACACACCTTAAAAGTCTAATAACTGAGAGAGCCAGTCTGCTAAAATCCTGACACCCCCACACCCAACCCACCCCCCGGTGGAAAGCTGGAACTATCATTCCTTGTTTCCTCTTGGGGGTGCATTTGGCAGGCTCAATAATCCCCATAGGATCCGTGGCATTTCTCCATCCAGTGATTACCTCTTAGAACTGCACTTCCTGCTTCTCTAGGCAGCCTTGAGCTAACAGGCAAGATAACAGTGTTAACAGACCAGTGTTGATAGATCATTAACCTTTATGGATTGTGCTTAATACCGATTTAGTACCTTGTCTTTGAAGCTGGTGTTTGTTGCCTGGGATAACCAGTTCTGTATTGTGTCTTACATGCCCAGGAAGGCAACAGACAATGGCTTTTTTTTCCCCTTTAGGATAGGTATCAACTCAGTTCAACAATGTTTGTGAGACACTGACTATATGTTAAACATTTGGACGGTGAGGGCTACAAATAATAAGACCTGATTTCTGCCCTCCAAGCCAGCAGCAAGAGACACAAATATGTGGTCGACTATGACAGGGCAGGCCGAGTGTGATAGCAGACCACAGAAAATGACAGTTACGGAGGCCCGCTAAAGGCAGGCCCTGAGCCCAGAACTGGGTATTCAGGATTGGAGATGATTTTGGCTAGACTCCCTGGTGGGTGGCAAATCTAGCTAAGATTTGAGCAAAACGTAGCCAGTAAAGTGATCACCCCCAGGCAGGGGGGCCAACATTTGCAAAGGCACAGAGATGGATTGGGGTGGGGGCAAAGGAAGAGCCAGGGTAGGTGATGGGAGATTAGCCTGCAAAGATCAGCAGTAAGAGGTGGAATCATGGAGAAACTTGAAGGCCTGGCTGAGGAGTTTAAAGCGTATCCTAGAGAACACAGGAGCCATTGATGGTTCATGAGGGTGAGAATGGCAGATTGGAAAGGAGGCTTTATGCAGAGCAGAGGAAGAATTTGAAGGGGTGATAAAAGTCAGTGTTCAAGGTCAGGCTGCACGCCTGCAAAACAAAACACAAAAGGGGAATTAAAATCCCTTTTCACTGCCACTCATATTTTCCCGATGATGTTTCCAATGTGGGTCGTAGACCAGGAAGGGATGTGAGGGTGGAGTGGATGGAAGAAAGGTAAGCAAGGAGGCCATTTAAATGTGTCGGACCCAGGTGATCAGCCGGCACCTTGTAGCCCCCAGCCTCACACTGTCATCTGCCCTTTGTTTGGTGACGTCTTTTGGAGTCAGGCAGGAGTGACGAATGGATACAAGCGCGCTGTAATCCTCGGTCAGCCGACGATCGTGGGTTCAGCGCCACCCGGGAGCTGCTGCTGGAGCCTGGGCAGCATCTGCCTCCAGGTTTAGGATAACAGCATCATCTTACGAGGCGGAGTACAGGAGGGCTGGGCAGAGCTGCTGCCGGAGTGGAAGCCAGGGGAGGTCACGTGGTCCCAGGAAGAACAGCTGATGTGGAGCCATGGCACCCAGAATTCCGACTGTGGTCTTGGGCCGGCATCTCCCAGTCTGTGTGCCCGAGTGTAAATGGACTGTTTGCCGGTGACCAATAAGCAGCACTTGCTGTTAGGATGGGGGACAAGGACATCCATTTTCCATCCGCAGCCCTGATTCTTTGTTTCTCTCGTGGTCCTCACATCCCCAAACCCTCTCAAAGGCTCCAAGCAATGTGACATGTCCCAGCAGCATCCCGTTCCCTGCCACCAGGACGTAAGGCAAGGTCACCAAACTTGGGTTTCAACTTTCCAGTTGTTCTCCAGCTTCCTCTGCCCGCCCCACTCCATCCCCCTCTCCTAAAGACTGGGATTCTGGAGTCCCTACTCAGACATCAACATCAGTTCACAGACGGGCACCTGCAGCTTTTAAAGAGAGCTTAGCCCCACTCCACCGGCCCCCCACCCCTCCCATGGAGCTGCAGGTCTGAAGATGCCATCACATGAAGCCTCAGGTGGTGGAGGGTTTTGCAGGGTGGAACTGGATGCTGGGTAGACGAGGGTGAATCGACCTCTCTCCGTCGCTTTGCTGGTGGGAACCAAGCAGCTGGATGGCACAGCATGGCAACGAGATGCCCAGCAGGGTAGTGTTGGGGAACCTCCAACCTGCAGCCTTGCGAATCCCAAATCCGGTCCCACACTGGCTGGTAGGCGTACTGATTCTACTGTGTGTTTCTCTGAGAAGTTGTGTAAGTGAAGTCACCTTAGACTATATTCTATGGGGATGCTCACATTTTGTTAATTTAATGACTAATGTATGGCATGTTCTTATTTTTCAAAAAGGTGTGTGCTAGGTACAAATAACATTATGAAGTGGTATTTAATTAAAAACAAAATCCACATGACAC EMBV3_29226 CACGCCCAGCTCCCCGAGACCTGAGGCAGGGATGGTGCTCTGGGGCTGTCGCTGGAAGTC Variant GeneID:509212|PIH1D1:NM_001075395:169_cdna 821^896 3 EMBV3_03097 GeneID:509212 18 GENE PIH1D1 MGC142550 PIH1 domain containing 1 EMBV3_17020 GCCCACGAGTGCTCATTGGGCTACTGTTATTCTCCTATGCAGTTGGATTTGTGCACTCAT Gene GeneID:513582|LOC513582:XM_002690696:321_cdna Constitutive 0 NULL GeneID:513582 10 GENE LOC513582 NULL similar to Olfactory receptor 4K13 (Olfactory receptor OR14-27) EMBV3_33242 GCTGCTTATGAGGTTGCCGACAGGGATGAGGTCCGGTTTTTCAAAGGTAACAAGTACTGG Gene GeneID:281308|MMP1:NM_174112:2_cdna Constitutive 0 NULL GeneID:281308 15 GENE MMP1 NULL matrix metallopeptidase 1 (interstitial collagenase) EMBV3_30493 ACCCCCGTCCAAAAGCAGTACCACACCCTCCAAGATGAAACAGAAACCCACCACTAGGTA Gene GeneID:511504|CAMK1G:NM_001076836:60_cdna Constitutive 0 NULL GeneID:511504 16 GENE CAMK1G MGC142748 calcium/calmodulin-dependent protein kinase IG EMBV3_33566 TAAAGAGGATGGGCGCTCCTGCAAGAAGGTGACAATCCGCATGACCATCCGCAAGAATGA Gene GeneID:506301|OTOG:XM_002693091:449_cdna Constitutive 0 NULL GeneID:506301 15 GENE OTOG NULL otogelin EMBV3_23079 AAGTCTTTGCTGTTCCTTAGTCGCTGCAGAAAACCAGCTTTCCCACTTGGCTGCTGGGGA Gene GeneID:507329|INPP5D:NM_001101882:20_cdna UTR3_Alt 2 NULL GeneID:507329 3 GENE INPP5D MGC157261 inositol polyphosphate-5-phosphatase, 145kDa EMBV3_29992 AAGCCCTCGCAGATCGTCTCCCTCACATGTGCTGTCTCTGGTTACTCCATCACGTGGTTA Gene GeneID:444875|LOC444875:XM_002696801:543_cdna Constitutive 0 NULL GeneID:444875 21 GENE LOC444875 NULL IgM EMBV3_40827 TGGAGGCTACAGAGGAAATGAAGGCACCCTAGAATCCATCAATGAGAAGACTTTTTCTGC Gene BVT0101_013816 + 0 NULL GK000013.2:16196408-16217715 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042036 TCONS_00042031 TCONS_00042034 TCONS_00042033 TCONS_00042027 TCONS_00042037 TCONS_00042028 1 XLOC_025582 Coding TCONS_00042031 XLOC_025582 Coding Coding KIN 13:16187380-16210289 j TSS31379 1460 1 TCONS_00042031_3 383 13 0.936834293696525 0.00552383077058662 0.00473669183443279 0.00445976757657441 0.00114140346882073 0.00334979090771416 0.00112819369980978 0.00242035514530899 0.00355112912753732 0.00250515471863535 0.000697098854708649 2.46148068341985e-45 3.00577192018448e-09 0.00112523389744955 0.000362483954815629 0.00110046462939464 0.00621731727714673 0.000176312088329462 3.49083589710575e-243 0.00235486545817074 0.000200055730388537 9.6060034333884e-05 0.002630110728811 0.000328560468375031 0.00200572007867895 0.00336921277175386 5.83451717715944e-06 0.00119655396487886 8.29459616852364e-69 0.000431224550448856 0.00180976556546407 NM_001101099.1 KIN Bos taurus KIN, antigenic determinant of recA protein homolog (mouse) (KIN), mRNA. 0.0 1083 100.00 0.41027397260274 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 0.0 1570 88.92 0.822602739726027 TCONS_00042031_3 sp|Q8K339|KIN17_MOUSE KIN17_MOUSE DNA/RNA-binding protein KIN17; 0.0 713 91.98 0.971279373368146 1 coding 1 0 1 0 -2.04148564662608 0.023543879880495 -0.0720664593858413 0.377391442677347 CCACGCCGAGAGGCCAGCGACGCCCGCCCGAGAGAACATGGTGACGCCGGCCCTGCTGAAGGTCGGTCAGACAGGCCTCACCGCGCGTGCGCGGAAGCTGCGTTACGCGCCCCGCCCACCCCGCTGTCTCCCTGAGCCTCTCTTCTTCCTGCCGGACTGAAGGAAGCCTCGCGAGCGTCCGGCGCCCAGCTTTCCGAGGCCCCGCCTCCTTCCGACTGGCGGGCGGTATTTGTCCTGCCCACTCCCGCTTGCCCTGTTCCGCTTCCGGTCGTCTAGGCGCTGGCCCCGGAAGGGTGTTGTGGTGGTCGCGATGGGGAAGTCAGATTTCCTCACCCCGAAGGCTATCGCCAACAGGATCAAGTCCAAGGGGCTTCAGAAGCTGCGCTGGTATTGCCAGATGTGTCAGAAGCAGTGCCGGGACGAGAATGGCTTTAAGTGTCATTGTATGTCTGAATCTCATCAGAGACAGCTGTTGCTGGCTTCAGAAAATCCTCAGCAGTTTATGGATTATTTTTCAGAGGAATTCCGAAATGACTTCCTAGAACTTCTCAGGAGACGCTTTGGCACCAAGAGGGTTCACAACAACATTGTTTACAACGAGTACATCAGCCACCGGGAGCACATCCACATGAACGCCACACAGTGGGAGACACTGACAGATTTTACCAAGTGGCTGGGCAGAGAAGGTTTGTGCAAAGTGGATGAGACACCAAAAGGCTGGTATATTCAGTATATAGATAGGGACCCTGAAACAATCCGCCGGCAGCTGGAACTAGAGAAAAAGAAGAAGCAGGACCTTGATGATGAAGAAAAAACTGCCAAGTTTATTCAAGAACAAGTGAGAAGAGGTCTGGAAGGAAAAGAGCAGGAAGTCCCTGTTTTTACGGAATTAAGCAGAGAAAATGATGAAGAAAAAGTTACATTTAATCTGAATAAAGGAGCCTGTAGTTCAGGAGCAGCATCTTCCAAATCAAGTTCTTTGGGACCAAGTGCCCTGAAAACGATTGGGACCGTGGCATCAGTGAAGCGGAAGGAGTCCTCCCAGAGCTCGGCTCCGTCAAAGGAGAAGAAGAAGAAGAAGTCTGCCCTCGATGAAATCATGGAGATTGAAGAGGAGAAGAAAAGAACTGCACGGACAGATTACTGGCTGCAGCCTGAAATCATAGTGAAAATTATAACCAAAAAACTTGGAGAGAAGTATCATAAGAAGAAGGGGATTGTAAAGGAAGTAATTGACAAATACACAGCTGTCGTAAAGATGATTGACTCTGGAGACAAGCTGAAACTTGACCAGACTCATTTAGAGACAGTCATTCCAGCACCAGGAAAAAGAATCCTTGTTTTAAATGGAGGCTACAGAGGAAATGAAGGCACCCTAGAATCCATCAATGAGAAGACTTTTTCTGCTACTATAGTCATTGAAACTAGTTGGTCCACTGACAGTTCTGCTCACAAGATTG EMBV3_04917 TTATATTCTGAGGGACTGAGGGGAATGTCAGTGACTGCTAATGGGTGCCACTCTTTGGAG Gene GeneID:100125306|COG5:NM_001103339:2_cdna UTR3_Alt 1 NULL GeneID:100125306 4 GENE COG5 MGC157282 component of oligomeric golgi complex 5 EMBV3_10845 CAAACTAGATGATCTCAGCCAATTGCTTTTCCTCTCTCAACCTTGGCTGCTACATATGCC Gene BVV0102_391593 + 1 EMBV3_11639 GK000006.2:91480130-91597121 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19700 ATCAAGCCCCCTTCCCCAGGCACTGTCTTAGCTCTTGCCAAACCTCCTTCACCCTGTGCA Gene GeneID:539145|OTUD5:XM_002700078:159_cdna UTR3_Alt 2 NULL GeneID:539145 X GENE OTUD5 NULL OTU domain containing 5 EMBV3_18835 TCTGAGCTGCTGCCTGACTGGCTCAGCCTCCACCGCATCCGCACGGACACTTACGTCAAA Gene GeneID:519016|CDT1:XM_002694763:533_cdna Constitutive 0 NULL GeneID:519016 18 GENE CDT1 NULL chromatin licensing and DNA replication factor 1 EMBV3_33762 GACTTTGTATTGTCACTCATTTGTATAAGTGCGCTTCGTTATAGCACGGGCCCTGACCCC Gene GeneID:513692|SPEN:XM_002694139:514_cdna Constitutive 0 NULL GeneID:513692 16 GENE SPEN NULL spen homolog, transcriptional regulator (Drosophila) EMBV3_01528 CTGCTTGTGGCCGCCTCCACCATGTGCATCCCACTCGGGGCCCTGGGCACACTCATCACA Gene GeneID:532774|SLC6A20:NM_001080294:140_cdna Constitutive 0 NULL GeneID:532774 22 GENE SLC6A20 MGC151920 solute carrier family 6 (proline IMINO transporter), member 20 EMBV3_43076 CAGGAGAAGACCTCTGGCAGGAGTTGATGTTTGCACAAAGGGAAACAGTACAGCTAGCAC Gene BVT0102_092820 - 1 EMBV3_03454 GK000002.2:19259997-19297436 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41971 TCCAACGTGTTCTTGAAAATCTCTCTTGTAATTGTGCCTCAGACTTCTTGAAAGTCCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12990 TTTAACCGCAAGTTACCGGCCCTTGAGCGCCTCCAGCCAGAGTTCCCTGCGTTCACTCAT Gene GeneID:618527|KREMEN2:XM_002697867:390_cdna Constitutive 0 NULL GeneID:618527 25 GENE KREMEN2 NULL kringle containing transmembrane protein 2 EMBV3_28851 CTCTGTCAGGCAATTACCTAGAAACAAAGATTGTCTTGGTTTGATCTGAAATGTAAAACT Gene BVT0102_167753 + 0 NULL GK000027.2:41772790-41865819 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30812 AGCCCTCTCTGGGCAATCAAACCCACCCAGTGCTTAACAATAGACGGGAAGAAGGTGCTT Gene BVV0102_151897 + 0 NULL GK000007.2:19229938-19230423 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212253 TCONS_00215862 TCONS_00212250 TCONS_00215863 TCONS_00215860 TCONS_00212251 TCONS_00212252 TCONS_00215861 2 XLOC_130129 XLOC_131103 Coding TCONS_00212251 XLOC_130129 Coding Coding DENND1C 7:19220571-19230928 j TSS159314 4532 2 TCONS_00212251_2 443 0.0507502206531333 21 0.564407106991116 0.00581514821349798 0.00404485720513984 0.00316230393190923 0.0033456716487656 0.00350605023672557 0.00170865652252511 0.00291044624815672 0.00299508485756338 0.00450776978206279 0.000784967614494786 9.45680380545142e-05 0.000194948065345624 0.000725431780021337 0.000754259485338719 0.000207581687064872 0.0109342013672987 0.00292747193604386 0.00460355403214156 0.00407551488163061 0.00256239758798923 0.00302127797313058 0.00275605047456164 0.00197491099350791 0.00417595883363029 0.00127895804196385 0.00111625459029732 0.000699901219329241 0.000908001718085294 0.000360901658048572 0.000684746444416334 XM_005208865.1 DENND1C PREDICTED: Bos taurus DENN/MADD domain containing 1C (DENND1C), 0.0 2455 100.00 0.30008826125331 NM_024898.2 DENND1C Homo sapiens DENN/MADD domain containing 1C (DENND1C), mRNA. 0.0 1654 87.23 0.296999117387467 TCONS_00212251_2 sp|Q8IV53|DEN1C_HUMAN DEN1C_HUMAN DENN domain-containing protein 1C; 0.0 776 88.37 0.968397291196388 3 coding 0 0 0 0 0.0235075457641239 0.847373249685091 -0.0288327227492438 0.603935008896389 CAGCCCCAAGAAAGCACAGGCCCCCAGGACCCCTGGGGAAAGGGTCCTGCTGGGCCAGCCCTCCAGGGACCATGGGATCCACAGCCGAAGGGGGTCCCCCTGCCCTGTTTGATTGGTTCTTCGAAGCAGCCTACCCTGCCTCCCTGCAGGAAGATCCCCCCATCCTGCGGCAGTTCCCCCCAGACTTCCAGGACCAGGAGTCTATGCAGATGGTGCCTAAATTCTGCTTCCCTTTTGATGTGGAAAGGGAGACCCCCAGCACCGCTGTACAGCATTTCACCTTCGTGCTCACAGATCTGACCGGCACCCGCAGGTTTGGTTTCTGCCGCCTGCGGGCTGGTGCTCTCAGCTGTCTCTGTATCCTCAGCCACCTGCCTTGGTTTGAGGTGTTCTACAAGCTGCTGAACACAGTGGGGGACCTCCTGGCTCAAGACCAAGTCTCAGAGGTGGACGAACTTCTTCTAAATCTGCTGCAGCAGCCCCTTCCTGGGACCCAGGCCTCAGTAGGTCTGGAGTTGGGCAGTGGAGTGAGGATTGCCAGTGCAGAAGGCCTGCAGTCCCCTGTCCCTGGGAAGAACATGTCGCTTTCCTGCTTCGTGGCTCCCGACTCCAGCCGCCTGCCATCCATTCCTGAGAACAGGAACCTAACGGAGCTGGTGGTGGCGGTGACCGACGAGAACATCGTGGGACTGTTCGCCGCCCTCCTAGCAGAGCGAAGGGTCCTGCTCACGTCTAGCAAACTGAGCACACTGACCTCCTGTGTCCACGCGTCCTGCGCTCTCCTGTATCCCATGCACTGGGAGCACGTGCTGATCCCCACGCTGCCGCCGCATTTACTGGACTACTGCTGCGCGCCTATGCCCTACCTCATCGGAGTGCACGCCAGTCTCGCTGAGAGAGTGCGGGAGAAAGCCCTGGAGGACGTCGTGATTTTGAACGTCGACTCCAATACCTTGGAGACACCCTTCGACGATGTGCAGGCGCTGCCCCCAGACGTGGTGTCTCTACTGAGGCTGCGGCTAAGGAAGGTCGCTCTGGCCCCTGGGGAAGGGGTGTCCCGTCTCTTCCTCAAAGCCCAGGCCCTGCTCTTCGGAGGGTACCGCGATGCTCTCGTCTGCAGCCCGGGCCAGCCTGTCACCTTCAGTGAAGAAGCCTTCTTGGCCCAGAAACCCGGGGCGCCGCTGCAGGCCTTCCACCGGCGGGCTGTGCACCTGCAGCTGTTCAAACAGTTCATCGAAGGCCGACTGGAGAAGCTGAACACGGGTGAAGGCTTCTCAGACCTCTTCGAACAGGAGATCACTTGTAGTGGGGCTTCCTCAGGGACACTCCGCTCCTACCAGCTTTGGGCAGACAACCTGAAGGTAGTAATACCACTTTTAGTGTTTATCACAGGATTAAATTAAACCCATAGCCATCCTCACTATGCCCATTTATAGAAAGAGGTGAAAAAAATCAAGACTCAGGGAGAGGGACTTTCCCGGCAGTCCAGCAGTTAGGACTCCGCACTTCCAATGCAGAGGGCAGGGGAGTTTGATCCCTGGTCAGAGAACTAAAATCCGACATACCACACACACACACAAAATACACACAACAAACAAAAAACCTCTATGCCTATGGTGATAGTTATGCAACTACTGTAAACCTACCAAAAATCATTGAGTTGCGCAAGTAAGGCAAGTGACTTGTATGGTATGTAAATTATAACTCAGTTTTTTAATTTAATAAAAAAGAAGATTCAGAGAGGAAAAAGGGTTTTTCCAGCAACACACAGCCCAGGTGGGCAGGTGGGGTCTAGGATATGCCTATGCCTCTCTGCCTTGGCTTTCTCTCCACAGAAAGGTGGTGGTGCCCTTCTGCACTCCGTCAAGGCCAAGACCCAACCAGCTGTCAGGAACATGTACCGCTCGGTGAGGCTGGGGTGGACAGACCAGTTACCAGGGTGACCAAGCCAGAGGATGTTTTAACCTTCCGTTTAGAGGACAATTTATCAGAACTGAACCAGCAGTTAAACCAGTTGCAATGTTTCCTACTTTTATTTTCCATTGACTGTGTTCTTTCACGGTTGTCAGATCGTCTTTCCTATTTAAAAATGATCACCAGGACTCTTTGGCAAACATCTTGGGGTATTCCTTCTTAGACACTAACATTTCTGCTTCCACGCTTAGTGTTTTGTTTTTCTCCCAAATCCAAAAGTTTCCTGGGACCGGCTCCCGCAGCTTGGAACCGTCTGTTGAATTTTTATTCTTTGCTCGGCTTTTGAACACGGACTTTTTACGGCGTTCCGGCTTTGCTGCTGCCTGTTTCATTTGGGGGTTATCTCCTCAGGGAATATTCCTTTTGTATTAGTCAAAGAGGCATGTTTGTATTGACGCCTTAGCTGGTACAGGGGGATTCTGAATGTATTTTGAGTCACCCATGAGCAGATGGGGAGATGAATCTGGCCTCAGGGGTGGAGGGCCTGGTTCTCAAATGCCGGTGTCAAATCACTCTTTCGGTTCCTCCATAGGCAAAGAGCGGCTTGAAGGGTATGCAGAGTCTTCTCATGTACAAGGAAGGGGACTCTGGCCTGCAGAGGGGGGGCTCCTTGAGGGCCCCTTCCCTCACCAGCCGCTCAGATCGCCTGCAGCAGCGCCTGCCTATCACCCAGCACTTTGGACAGAATCGGCCCCTTCGCCCTAGGAGTCGCCCCAGCAGGAGACTTAGGCTGGAAGAGAAACCTTCTGAGTCCCTGGAAGAGAGGACACCCTCCCTGAGCCCAGAGGATGCTCAGGACCCGTGGGCAGAGGAAGCGCTGGATGGCAGCTTCCTGGGGTCTGGAGAAGAACTGGATTTGCTAAGTGAGATATTGGATAGCCTGAGCACGAGAGCCACGCGGACTGGTAGCCTGCGGCCCAGCCAGAGTTTAGACTGCTGCCACAGAGAGGACTTGGACAGCTGCCTCAGCCTGCCTGACATACCGGGAAGATCGAGTTGGCAAGCGGATGATGACAAACCGCCAGAGCCCCAGCACCTGTCCTTGCTGCCTCTGCACACCCCTCAGCCTTTGGGTGCCACAAGCTCCAGGAAGCACCCCACTTGCCAACTGCCCTCAGAGACTGGCCCAGAAATTGAGTCTCCATCCCAGTCTTTGACAGCTTCTGCAGACCCCAGCAGCAAAGGGGACCCTGGATCCTCTCCCACAGAGCCCCAGCCTCCCCACTTCTCCCCTCCCCATGAAGCAACTGAAGATCCCACAGCCCAGGAGGACCCCTGCTCCCAGCTCTTGGCAGCACCCAGCCAGCCCAGCCCTCCAGAAAGCCCCCGACCTGAGCCCAACTTGGGTGTTACCTGGACATCCCAAGCCCTTGATTCTGTCTCGGATCCGGGTTCCTCAGAGAACCCCGGAGCCTCACCTTCAGAGGGCCTGCTCGCAGTTCACCTCCAGCCCCTCGAGGAGCCAGAAGCCCCCAGGTCCCCAGCTGCACCTGCAAGCAACTGGCAGGAGCCCCAGGCCAGGAGCGGGCCCAGAGTCGCTGAGCTTAAAAAGTGTTTTGAAGGTTAAGGACCAAGGATCTGGGAGAGACTCTGGCCCCTTGTTAATAAAGCCTCAAGAGCCCAAAGCTGGATTTTCCTGACGAGTTTATCTGGGAGCCCTCTTTTGCTCAGAAACCCACACCACTCACCACCTCCCCTCCAGAGGCAACCTCAGGCTGGCTCTTAGGTGAAGCTAAAAGCCCCTCCCTTCCAGGAAGCCCTCCCAGCCCCTAGGGCCCTCCAACAGCCTATGTGCCCTGTAGGAGTCTCCTTCATCTAGGCTAATTCCTACTCCTACCAGCCCACAGGAAGGTCTTATAATATCTCACCACCACTATATAGATATATGTGTAAAATGAGCAGCCTCAGTGTCCCCTGCCATCAAAGGCACAGTCTTAGAAGCACCTTCTTCCCGTCTATTGTTAAGCACTGGGTGGGTTTGATTGCCCAGAGAGGGCTCTGCCTTCCCCCAAGGTCACACAACCAGGAAGGGTGATGGGTAGAGGAAGGGGACCTAGATGGGCAGGCAGCCCCGCACCGTCTCCTTGGAGTCCTGGGGAGCCCGGGCCTCAGCTGCGTGGGAGAACTGAAAGGAAAGGAGAGGGGGGGAGTGTCGGGCCTGTGCGGCAGCGGGACAGATAACCGATGGTGCAGCAAGCGAGGAGGTGGGTCCCCAGCCCTGGCACCCCAACTGCAGGCAGAGTCAAGCAGAGGCGGCATGCTTCGCAGAGCCCGCCCGGCAGGTGCCCCGCGGCCCCCCAAGTCCTCCGGAACCATCAGAGGCCGGTGTCTCGGTGGCTGTGAGAGAGCGAGTGCCGGGCAGTCCTGAGCAGTGTTGGTGGCTGCGGCCAGCCCCAGCCTTCAGATGAGCCGCTCCTCAGGCGGCAGCTTGAGATTGGGGGGCGGTGGAGCTCGGGCACCCACCTGCTCCTCACTGCTGGGCCGGTAGGTGCCCTCCGTTTGCCTCTTCTCCCGTAGCTTCCGCACCAGCAGGGCCAGACCCACAGCCAGGAGCACGG EMBV3_16623 GGAGGCTGGCTTCTGTCTACAGGATAAGATGGAAATCCTCATGAAGCGCCAAGAAGAAAG Gene GeneID:614062|CCDC60:XM_002694583:655_cdna Constitutive 0 NULL GeneID:614062 17 GENE CCDC60 NULL coiled-coil domain containing 60 EMBV3_41599 GATATGGCCTGTACAAAGGCAGAACAAGGATCTTAATTAGAATTCTGACAAGCCCACTCC Gene BVT0102_183772 - 1 EMBV3_29958 GK000015.2:63020364-63034392 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27330 TGGCATTCTGTGTGCAAAAAGAAGCATATGGTGGCTCTTAAGTTTTGAAGTTATTACAGC Gene BVV0102_091005 + 0 NULL GK000004.2:25835398-26353776 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183457 TCONS_00183455 TCONS_00183451 TCONS_00183456 TCONS_00183452 TCONS_00183454 TCONS_00183458 TCONS_00183459 TCONS_00183450 TCONS_00183453 1 XLOC_111153 Coding TCONS_00183459 XLOC_111153 Coding Coding SNX13 4:26302928-26448540 = TSS136892 4058 1 TCONS_00183459_4 881 24 0.972296049062227 0.000840743046361753 0.0011476304935482 0.000907594666010067 0.000337368689777328 0.000723919176926899 0.000398828605159125 0.000586336381099817 0.000588331107618677 0.00102009879333018 0.000363605990991357 0.000184351295095356 8.89957690543157e-05 0.000348254384465612 0.000583220461096619 0.000261793970634156 0.00178497841348721 0.000445728063810344 0.00147817763055296 0.00092598534211404 0.000469850069760158 0.00044803224518201 0.000974033967820926 0.000335112462031246 0.00122160138445751 0.000693689826617157 0.00054399982661354 0.00081764671287342 0.00038343245631856 8.09716780590924e-05 1.57668196343092e-08 XM_003585951.2 SNX13 PREDICTED: Bos taurus sorting nexin 13 (SNX13), mRNA. 0.0 7319 100.00 0.999753573188763 NM_015132.4 SNX13 Homo sapiens sorting nexin 13 (SNX13), mRNA. 0.0 4129 90.28 0.747412518482011 TCONS_00183459_4 sp|Q6PHS6|SNX13_MOUSE SNX13_MOUSE Sorting nexin-13; 0.0 1216 96.68 0.682179341657208 4 coding 0 0 0 0 -0.0376695347261091 0.808498978586441 -0.0222121708105169 0.754053478385881 TGGCGGCGCGTCCGTCGCGAGCAGCCGGGCAGGGGGGAAGCCAGCGAAGCCGAGTAAAGCCGCCGCCCGGGAGAGGACTGAAGGAGCTGTTGCCGCCGTTGGCGGCGGCTCAGGCAGTTTTCGCTGCTGCTACGGCTGTTGCCATGCGGCGAGGCTAGGGAGGAGCTCACTTCCCCGGGGTGTAATAATGTTAACAGAGACCAGTCTATCCATATGGGGATGGGGAAGCCTTGGCATTGTCCTTTCTCTAATAACATTTGGACCCTTTGTAATATTTTATTTGGCATTTTATATCCTCTGCTTTGTGGGTGGGGGTTTTGTTGTTACTCTGCTGTTTGGAAAAACAAACTCAGAGAAGTACCTAGAGCAGTGTGAACATTCATTTCTCCCTCCAACATCAACTGGGATTCCTAAGTGCTTAGAAGAAATGAAACGGGAAGCCAGAACTATAAAGATTGATAGAAGATTGACAGGTGCCAATATAATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGATTATGTCCAGTATTGGTATTATACACTAAGTGATGATGAATCTTTTCTTCTTGAAATTAGGCAGACTCTTCAGAATGCACTCATTCAGTTTGCTACTAGGTCTAAAGAAATAGACTGGCAACCTTATTTTACTACACGCCTTGTAGATGATTTTGGCACACACCTACGAGTATTCAGAAAGGCCCAACAAAAGATAACAGAGAAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAGTTGAAATGGAAAAGGATGTTTGCCGTGACCTAGTGTGCACTTCTCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGAGGTCTTATTATATTTGTTGCTACCTCCTGGAGATTTCCAGAACAAGATCATGCGATACTTTGTCAGGGAAATCCTTGCACGTGGAGTTCTTCTTCCATTGATAAATCAACTCAGTGACCCTGATTATATTAATCAATATATCATATGGATGGAGATAAATACTGTGAAACTGGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCACTACAGTTTTTTATGGACTACATGCAGCAAACTGGAGGTCAGGCACATCTCTTCTTTTGGATGACAGTGGAAGGATACCGGGTTACAGCCCAACAGCAGCTAGAAGTTTTATCAAGTCGTCAGAAAGATGGAAAACATCAAACCAACCAAACCAAAGGTCTTTTGAGAGCAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCGAGAGTTACTGTTGATGATTATTTGGTAGCAAAATTAGCAGATACTTTGAATCATGAAGATCCAACCCCTGAAATCTTTGATGACATTCAAAGGAAGGTGTATGAATTGATGCTTCGAGATGAAAGATTTTATCCTTCCTTCAGACAGAATGCACTTTATGTGCGCATGTTAGCTGAGCTGGATATGTTAAAAGATCCTAGTTTCAGAGGATCAGATGACGGTGATGGAGAATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGTATCTTCTGATGACTCAGTACAACTTCACGCCTACATTTCAGACACTGGCGTCTGTAACGATCATGGCAAGACATATGCGTTGTACGCCATCACTGTGCACCGGCGCAACGTGAACACTGAGGAGATGTGGAAGACCTACCGTCGCTACAGTGACTTCCACGACTTCCACATGAGGATCACCGAACAGTTTGAAAATCTGTCAAGCATATTAAAGCTTCCTGGTAAAAAGACTTTTAATAATATGGATAGAGATTTTTTAGAAAAGAGAAAAAAAGATCTAAATGCATATTTGCAGTTACTGTTAACTCCTGAAATGATGAAAGCGTCTCCAGCCTTGGCTCACTATGTGTATGATTTCCTTGAGAACAAAGCCTATAGTAAAGGGAAAGGGGATTTCGCTCGCAAGATGGACACTTTTGTAAATCCACTTCGAAATTCTATGAGGAATGTTTCAAATGCAGTCAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAAATGTCAGACAACATGGGCAAAATGTCAGAAAGATTAGGTCAAGATATAAGGCAATCATTTTTCAAGGTTCCTCCTTTAATTCCGAAGACTGATTCAGATCCTGAACATTGTCGAGTTTCAGCTCAACTTGATGATACTGTGGATGATAATATTCCACTTAGGGTAATGCTGCTTCTCATGGATGAAGTATTCGACTTAAAAGAGAGAAATCAGTGGTTGCGAAGGAATATCAAAAACCTACTTCAACAACTTATAAGAGCTACATATGGTGATACTATTAATAGAAAAATAGTTGACCATGTTGATTGGATGACCTCACCGGAGCAAGTAGCTGACTTAGTGAAACGTTTCAGAGATGCCTTTTGGCCAAATGGCATTTTAGCCGAGACTATCCCGTGCAGAGATAAAGGTATTCGAATGAGAACAAGAGTCGCAGGAAAAACTAAATTACTTTCAATTATGCCAGATGAACTGAAGCACATTATTGGAGCTGAGACAACACGGAAAGGTATTCTTCGTGTTTTTGAAATGTTTCAGCACAACCAGTTAAATAGGAGAATGGTTTATGTCTTTTTGGAAGGCTTTTTGGAAACCTTATTTCCACAGTATAAATTCCGTGAACTTTTCAACAAACTGCATTCACGGTCAAAGCAGATGCAAAAATACAAACAGAAACTTCAAACTACTCAAGCGCCTTCTTTACAGAAAAGGTGACACTCCAATCTCTGAAACTGGTGTTCATTTTGTCCAGGACTAATGGTATGGACGGATCTTCTGGGGCTTAACTCATATACTGTTGTGTCTGCACCGGTCTTTTAGTGTCTCAGAATAGATTATTAATACATCCATATGACTGCCATTCTTCTCATCATTGTCTATAATCCAGCCACTTGTACCAAGAGAGATTTCTGTGTCTTAAATGATTTGGTGCATATTTTTGCAACACTGAGAGGATACTGCCTACAGCTCAAGCAAGGATGACATTGGTCTCTTCCGTTTCAAACTAATCAGCATTCTCCAGCAATGACAAAGTGCCAGAGTGTATATATGAGAGCTAAGGAAAGCACAAAACAATGGTTCACAGACAAATTGGCTAATTTGTTTAACAGTGGGAAACCGTGCAATGTACTGTTTGGAGGGGTTTGTTTTGCATAATGGTTTTATATATCTTTGTCGGAATTTTGATACAGTGTAGATTAGCCAGGTGAATGATCTTTGAAACATCTGTTTCAGGTCTAGGGAAAATGACAGAATGCCCTTAAAGTATGAAGTGACATATCCAAATTACACTTTTGTTTTCATGACATAAGAACCTAATGTAAAATAAAACCAGTCACAACCAAAGTTTGATTGGATTTGTTATTCATTGGTAGAAAACAGATTTTAAGTAATTCTTCTATGTCTTAAGGGCTCTATTTTGCTCTTATGGTACTCATAATTAAGTTTTATTTTGGCATTCTGTGTGCAAAAAGAAGCATATGGTGGCTCTTAAGTTTTGAAGTTATTACAGCTTTCTTTAAGAGGTTACTGATTATATAATAGGGGCTAGAATTTGTTGAAGGAACTGCCAAATACTTCTTAAAATATGGAAATTTAAAAAAAGTACTCCTGAAAGTTACTCTATGATAATTTTAAATTGTGTGATCTAGACATACGTTAGGTGATTGCAAAAATAGCAAATCAAAGGATTAAATGAGCTTATAAGTTGTATGTAAACATACAAATTCCTAACTCTATTACAGTGTACATATATGAAAAGAAATAATGAAAACAGAACTATAATATTTTTTAAAATATGCTTTTATTTATATTTTGCATAATGTAAAATTCTACTAAATAAAGCAAGTTGGCAAAACCCCTTGGTGTATACATTTAAGTCCCTAAAATAATTTTATACCAACAACAAAATACCTTTTCCAGTTTTGGAGCTTCTGCATTT EMBV3_40698 CTGCAGAACTCCAGAGCATGGATCAGTGGCAAGGCAGTGGTTCTTTGATCTTTCCCCTTA Gene GeneID:540741|SP1:NM_001078027:57_cdna UTR3_Alt 2 NULL GeneID:540741 5 GENE SP1 NULL Sp1 transcription factor EMBV3_21705 CACCACACGCACTGGAGAGGTCGTGGTCACCAGCAAGAAGGATTCGGCCTTCATCAAGAA Gene GeneID:535629|SRCIN1:XM_002695948:386_cdna Constitutive 0 NULL GeneID:535629 19 GENE SRCIN1 NULL SRC kinase signaling inhibitor 1 EMBV3_09480 CCTGGTAAGGAACGTGGAACTAACAAGCCACCAGGACCAGAAGAGTTGGGGAAAAGTCAG Gene BVT0102_394923 + 1 EMBV3_22960 GK000014.2:39348349-39354350 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056109 1 XLOC_033913 NonCoding TCONS_00056109 XLOC_033913 NonCoding NonCoding - 14:39352910-39354158 - TSS41786 1248 1 TCONS_00056109_4 122 0.0705128205128205 1 0 5.45098882486471e-05 0 0 0 0 0 0 2.36968003826854e-05 0 0.000263749377786737 1.83428311410389e-06 2.86513163327521e-06 0.000278191655156813 0.000511358186123868 2.751874121851e-05 0 0 2.01048759792202e-05 0.000873381814856371 1.15247378940413e-05 0.000400142073683094 0 0 0.0001477652291578 0 3.38723652073908e-05 4.69483531390045e-06 0 0 0 XR_238555.1 LOC101901949 PREDICTED: Bos taurus uncharacterized LOC101901949 (LOC101901949), 7e-112 408 79.07 0.380608974358974 0 noncoding TCTTGGGCTTCTGTAATATTTCATAAATTGGTATATTTCAATTATAATAAAACATTATATTTCAACTTATTTTTTAGGGTTGCCTTCACTATGTGTTAGGGGAAGCATACTGGCTGAAACTGCCCACCCTGGCCAGGCACTATAGTAACCATTTGTGTGAGCTGTTTTATGACACGAGGTCCTGGTAAGGAACGTGGAACTAACAAGCCACCACGACCAGAAGAGTTGGGGAAAAGTCAGGAGACACCACATGTCTGACCACTTCCCAGAGTCCTTCTTCCTGGCATCCATCTTCCTTGAGCAATGCCTGAGCCACCAGGAAGGACCTTGAGTCAGAATGATTGGCCAAAGACAACCTGGAAATTTATCCTATCACCTTAAAACCCCAGACTGTGAGCCACATGGCAGAGCAGTTCTGGGTTTCCTTACCCTACTGCTCTCCACCCAGATGCCCCTACCCAATCATCTTTTGCTTTCCCAGTTCATGCGTGTCCTCGCGCAATTCATTTGAGTGTTAGACAAGCGCCCTCTCTCCTAACTTGGAAGGGATTCTACTTCCTGCAACATAAAGCGCTGTGGATTCCCAGTTTTATTCAGTATCTTTATAGCCTCAGCTTCCGAGTTAGTCCTGGCAATAGGCAAGGCACTCAATACCTCTTTAACAAATAATAAACTATCCGGTACACGAATAAGAATGATTTCAGAAAACAAATTTGACAAGTATCAACAATGAGCAAATTCTACTTATCTTCTACCAACTCATTGGTTGGATCAAATTACCATTCATTTTTGTGCAAACGTGTAATGTATTATTCCTCTGTGCCAATAGATTAGAAACATTTTCCATAAAGAAAATGTTTAAGGGAGCCTAGAAAATGACACCCAGGAGAATGAAACATTTAACTCGGGCTTCCAGGATTTGTCCTTTGAGCATGGCTCTCCCCTCTATCCTTCCACACTGTTATAAAGAGGCCAAGACTCTAGCCTGCCTGGCATCTCCGTCCACGCCTAGAGAATCCCAGGGACAGAGAAACCTGGCAGGTTACAGCCCATGGGGTCGCAAAGAGTCGGACACGACTAAGCGACCAACACACACACACACACTCCCTTCAGTTCTTCCACACTGTTATAAAGACACACACACACACACACACACACACTCCCTTCAGTTCTTCCACACTGTTATAAAGACACACACACACACACACACACACACTCCCTTCAGTTCTTCCACACTGTTATAAAGAC TCONS_00051775 . 5' 76 TCONS_00051775 . 5' 76 EMBV3_26632 CGAAGACCCTACCCAGGGGAGGACTTCTGGGTGGAACCTTTTGCCAGCTTGTCCGATGCT Variant GeneID:614027|SIRT3:XM_002683729:14_cdna 656^817 2 EMBV3_22326 GeneID:614027 11 GENE SIRT3 NULL sirtuin (silent mating type information regulation 2 homolog) 3 (S. cerevisiae) EMBV3_19270 ATCGCCTGGATCACAGCAAGCATAGTATCTCCTTGCATACTCGAGTCTTTTTGTTCACTC Gene BVV0102_392312 + 0 NULL GK000021.2:737793-781157 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22830 CGTCCGTCCTGGAGAAGCTGAAGGAAGACTGCAATAACACGGACAACAAAGACCGGAAGT Gene GeneID:520462|SH3BP4:NM_001144088:26_cdna UTR3_Alt 2 NULL GeneID:520462 3 GENE SH3BP4 NULL SH3-domain binding protein 4 EMBV3_16518 CGAAGCCACGCTGCTGAACATGCTGAACATGTTGAAGCAAAGGAGGAGTCGGAGGAGTCG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 600^954 11 EMBV3_14209 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_17985 AAAGCCCTGTCCACCTGTGCCTCCCATATTGCTGTGGTCACCTTAATCTTCGTGCCTTGT Gene GeneID:504624|LOC504624:XM_002699112:158_cdna Constitutive 0 NULL GeneID:504624 29 GENE LOC504624 NULL similar to Olfactory receptor 4D5 (Olfactory receptor OR11-276) EMBV3_43447 CCGCAACACACCGGCACTTTCAGAATGAGAATCTATGAGAGAGATGACTTCAGAGGACAG Gene GeneID:281720|CRYGB:NM_001013594:8_cdna Constitutive 0 NULL GeneID:281720 2 GENE CRYGB NULL crystallin, gamma B EMBV3_24453 GGGTTATTGGCCATATCAACACAGCTCCACAAAATCCCCATCACTGGAAACACCTGGGTG Gene BVV0101_028729 + 0 NULL GK000021.2:8268933-8278445 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122444 1 XLOC_073999 NonCoding TCONS_00122444 XLOC_073999 NonCoding NonCoding - 21:8272289-8275499 - TSS91203 3210 2 TCONS_00122444_9 113 0.0554517133956386 1 0 0.000122917385457334 0.000106431984616362 0.000115314593462006 1.03478494388692e-05 8.61314851139922e-05 1.78295501501561e-05 7.0852552645233e-05 0.000136351677869808 0.000110609361358659 2.56354904857694e-06 4.9919752006867e-06 1.44809808653639e-05 4.91621564586497e-05 0 7.64203493892228e-06 0.00129178174585774 0.00122577493320194 0.00078164584719033 1.7871477453366e-05 0.000181465971331736 3.21541613619739e-05 0.000820665767539637 0.000237209931201985 0.000302911488480697 0.000125187321337457 1.31690945500104e-05 3.28550400233733e-05 2.13199085298808e-05 3.32714648370912e-05 0.00020977289503561 XM_005217274.1 MR1 PREDICTED: Bos taurus major histocompatibility complex, class I-related (MR1), transcript variant X1, mRNA. 2e-47 196 84.44 0.0554517133956386 NM_000875.3 IGF1R Homo sapiens insulin-like growth factor 1 receptor (IGF1R), mRNA. 0.0 2482 81.99 0.794704049844237 0 noncoding 0 0 0 0 0.399221741394073 0.637808595787777 1.59287148988885e-05 0.999811287362731 TTGGCATGAAGTGGTGTGTTTTCAGTTGGGTAACAGATGTCAGAGCCAAGTATGATGCCAAATTCTAGGCCAGTTTGTTCCACTGAAGCCTCTTTCTCAGCAGCCCACCTCTGCTGGCAGGTGGCTGTATGGGATACAGGCCGCTGTTATGACAAGGCCACACGTAGCTCAGAGCAGTGAGAAGGCTAGGATACTTGGTCCAAGGTCCTCAGCTGTCACTGTTGGGTCCTCTGGCCAGACAGTGTCAAAGGCAACTCTTTCCAGAACACAGGTACCCTCCAGGTGACAGTGAAGCTCCATGGTATGCCTTGGCCCATTCCAGCAGTCCTAGTAATGCATTTAAGGTTTGGGGTTTGTTCTTTTGTTAATATTATTTTTGTGTTTGTTGGCTGTCTTTCCATTTCCTGGGCTAAGCAGCATTGGGAGACATGGCCCAGAGATCCACTCTTTAAGAACCAGTAATGAAAATCAAACTCTTAACTCCACTCTGACGTAGTGGGTGGTACAGATGAGAACGTCAAGAGAGGATGTTGCTTATATTGAACCTCTGTTGCCAGAGATGCTGAAGATACAGACCTTGGACAGGCCAGAGGGTTTCATTTTTGGCCTCCAGCTTAGATGACTAGTTGGTCATTTAGAGAAAAAGCAGATGAACACTCCTTGATGGTGGAATGAGGAAGTGGCAGGAAACCATTGTAACAGGGATCGTGAATGACATGGAGAGAGGAAAGCATGAGCAGAAGGTACAGGGCTTGGAAGAAGTGTGGGCTGTGCTTGGAACTTGATGGTTTCTGAAGGTATCAGACCACATCAAGGCTCAACAGTCATCCATGGGCATTTGGTGTCAACAGATAAACCTAACATCCTACTTTGGAAACTGTTACTGCGGAGTTCAGTCAAATTGTTCAAGAACACGAACTGCATCGCACCCGTCAGTTGTCAGTTCTGGGGCATGACTTTAGGGTTTTGTTTTATTTTGTTTATGCAAGAACATAACGATCGCTCATCTGTATGTCCACGTTTGTGTGTGTCCACATCTTTCTGGTAAACATCATTGTAATTAGTCACTCATTAGCGTTTTCAATAGGGCTCTTAAGTCCAGTAGATTACGGGTAGTCAGTTGACGAAGATCTGGTTTACAAGAACTAATTAAATGTTTCATTGCATTTTTGTAAGAACATAGAATAATTTTATAAAATGTTTGTAGTTTATAATTGCTGAGAATAATTTAAAGACACTTTTTTTCTCTGTGTGTGCAAATGTGTATTTGTGATCCATTTTTTTTAGGACACCTGTTTACTAGCTAGCTTTACAAGATGCCAAAAAAAGGATTTTTCCCTGACCCAAGCCGCGGCTCACCCTCTTTCCCCCCATGCTTTGTGCCCTAGTTTATAACAAAGGAACGATTTAAGAAGTAGTTCTGTATCTTCAGTATCTTGGTCTTCCAGAACCCCCTGGTTGGGTAGGGGATCATCTTTTACTGCTCATTTCCCTTTGGAGTGTAGCTACTTTAACAGACTGAAAGAACCTCATTGGCCAAGCAAATCGCAGAGGTGTTGTAGCCCAGCGGCGCCGTGGCACCATCCACATCTGGTGGGGTTGGTTGGTACCGTTAGGCGGTGCCTCAAGATGGAAGGACTCTATCGCACGGCTCACGGTTTTCACGATGAGCGCAGCACACAGACCGCCACAGAAAGACGGTAATTCTGGCGCACGCAGGCCATTTGCTTCCATGCCTCATATCATGGTTAATGCTTTGTTATGACAAGGAAGAGACCCTGTTTTTATTTGAGGCAGAACACCGAACATAGATGTTTTTCAATAGAAAACAAACTTTTTAATAAAAACTACACACATTCAAGATCTTTTTTAAGTTTGACTCCCTTGCTTCCTGCTCTCAGTGGGTTATTGGCCATATCAACACAGCTCCACAAAATCCCCATCACTGGAAACACCTGGGTGTTTTGTGCTACATGGGAGAAAGGCCCAGAAACAATTTGGGTTTTGTTTGCAACTTTTCCTTTGGATGTTTGGTGTTGCACAGACACAACCACAGGTGATGGATGCTTGGCAAAGACACCTGTCTGCTTTCTAAGCCAGTGAGGTTGAGATTGGGGTTTGCCAGAGTTTGTCTACCTCTGGGACAAAAAAAAAAAAAAAATCGAACCAGAAGGCACGATGGAATGGATGCATCACAAATAATGCATTTTCTGAGTTTTCTTGTTTAAAAAAAAGTTTTTAAAAAAAAAAGTTAAAAAATTAAAAAAAGGTAACAACATGGCCAATTTGTTACATAAAATGACTTTCTGTGTATAAATTATTCCTAAAAAATTCCTCTGTTTATATGAAAAAATCAGTAGATGAAAAAAATTTCAAAATGTTTTTTTGTATATTCTGTTGTAAGAATTTATTCCTGTTATTGCAATATACTCTGGATTCTTTACATTACCGAAAACAAAGAAACTTTGTCTATTTTGAATGGCTGAAGCTAAGGCAACTTTAGTTTCTCTTACTCTGCTTTTTTCTAGTAGTTAAAGTACTACATGGTTTAAGTTAAATAAAAGAATTCTGTATGCACTTTGGTCTCTGATTTTGCCCCTCCCCGTGCTTCTGAGCAGGGAAGCTGAGCTGCGGGTGGCGTGTGTGTTCACACACGTCGCTGGGAGGCGTTCTGCGTGAAGGCTTCACCCTGTTTCTGACAGCTGAACCTTCTTGGCATGTACATTGCGGGTGAACAGGAAAGCTATTCTCCATTACATCAGCCAGAAGAAAATTTGAATTTCTATAAAATATAGATATCTGTACTTGATTTTTGCTGTGTAGGCTTTTCCAGGCGGGCAGGTTTCGTCTGGGCGATTCTGGGGCAAAGGACTCTCTTCACACTTTCACATCCTGGTTGGTCCCTCATGGTCCGCACACCACCTCAGAGGGCACAGGCGGCCTCGGACACACACAGGCTGAGGCTCACTGGCATTGCACAGACACGTTAGTTACTTTTCAGCCGACGATCTTGGCCTACCCAAGGATGCTGTGCCAAGTCGCTTGAGTCCTGTCTGACTCTGTGCAACCCTAGGGACTGTAGCCACCAGGCTCCTCTGTCCATGGGATTCCCCAGGCAAGAATCCTGGAGTGGGTTGTCCTGCCCACCTCCAGGGGATCTTCCCGACCCAAGGATTAAGCCCACATCTCTTCCGTCTCCAGCACTGGCAG TCONS_00118630 . 3' 286 TCONS_00118630 . 3' 3495 EMBV3_08528 CCGTGCTCTCTTCAGGGGCACACTTGGAATGGTGTTGCCTTTCCTGCTTGGTATGTAACA Gene GeneID:541149|LOC541149:XM_002699663:13_cdna Constitutive 1 NULL GeneID:541149 X GENE LOC541149 NULL similar to transmembrane protein 185A EMBV3_26766 TCTCTGTGCTGTCTTCCGCATCCCTTCTCCAGATGCTCGCCACAAAACTCTCAATACATG Gene GeneID:506452|LOC506452:XM_002693422:122_cdna Constitutive 0 NULL GeneID:506452 15 GENE LOC506452 NULL similar to olfactory receptor MOR31-4 EMBV3_14555 TACGTCGGTCCCTGAGCCGGTTTCGCAGTAGATAAGCCATCTTTGTATCCACTCTGCACA Gene GeneID:282527|TNFRSF1A:NM_174674:8_cdna Constitutive 0 NULL GeneID:282527 5 GENE TNFRSF1A MGC138050 tumor necrosis factor receptor superfamily, member 1A EMBV3_43406 AAATGGAATCCTCTCCATGGAGATCTTTGGTACACCAAAATTTGACACAACTGAATTACC Variant GeneID:511138|LOC511138:NM_001075497:586_cdna 333^404 1 EMBV3_39064 GeneID:511138 29 GENE LOC511138 NULL hypothetical LOC511138 EMBV3_36575 GCCTTTATGAGAATGCTGTAACTTCCAATGGAAAAATAATTTTAAGATTTCAGCAACATC Gene GeneID:509971|ANGPTL1:NM_001075426:91_cdna Constitutive 0 NULL GeneID:509971 16 GENE ANGPTL1 NULL angiopoietin-like 1 EMBV3_19166 CCTTGTTTCCTATGCCTTCATCCTGTCCAGTATCTTCCGCATCAGAACCACAGAGGGAAG Gene GeneID:515545|LOC515545:XM_002699200:83_cdna Constitutive 0 NULL GeneID:515545 29 GENE LOC515545 NULL similar to olfactory receptor Olr1194 EMBV3_08224 ACATGTACCCAGAGACCCACCTGGGCAGGCTTTTTGCCTTCCTCTGCATTGCTTTTGGAA Gene GeneID:784234|KCNV2:XM_002689623:44_cdna Constitutive 0 NULL GeneID:784234 8 GENE KCNV2 NULL potassium channel, subfamily V, member 2 EMBV3_12188 TAAAGGGAGCTGTCGATGGAGGCTTGTCTATCCCTCACAGTACCAAACGGTTCCCTGGTT Gene GeneID:515238|RPL5:NM_001035306:138_cdna Constitutive 0 NULL GeneID:515238 3 GENE RPL5 MGC128408 ribosomal protein L5 EMBV3_23488 ATTCCAGAGTTGCAAGAGGCTTTATGAAGAAAACCAGGGACGGGGGTACTTTGAGCACCG Gene GeneID:784077|LOC784077:XM_002688239:47_cdna Constitutive 0 NULL GeneID:784077 6 GENE LOC784077 NULL similar to MGC138009 protein EMBV3_37815 CACCCTCCAGACAAGAAGCTGAGCAAAAATGAAACACTTCGCCTGGCCATGAGGTATATC Gene GeneID:524755|TAL2:XM_002689901:39_cdna Constitutive 0 NULL GeneID:524755 8 GENE TAL2 NULL T-cell acute lymphocytic leukemia 2 EMBV3_19448 TCCCCGCGGGGAAGAACGTGCTGCTGCTGGTGGTGAGAGATTTTCAAGAATATGTAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09832 AAGGTTGAGACGTGTGGAGTTTGACTTCCAGGTGGCATTAGGATCTGGTCCTGCCGCGGC Gene BVT0101_073058 + 0 NULL GK000026.2:51644756-51657460 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36739 AAACCTTGGTAAAGCCCAGTGAACACAACAATTCCTGGTGCGGGTATTTAGGGGAAGGGG Gene BVV0102_124191 + 0 NULL GK000016.2:3662497-3674610 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066645 TCONS_00066648 TCONS_00066651 TCONS_00066653 TCONS_00066649 TCONS_00066647 TCONS_00066644 TCONS_00066650 1 XLOC_041235 Coding TCONS_00066645 XLOC_041235 Coding Coding LOC515828 16:3613471-3663700 j TSS50297 2269 1 TCONS_00066645_1 144 0.212869105332746 6 0.954945448753683 2.22791395058459e-28 4.51866154799459e-27 1.04112034200994e-16 1.47408383391765e-14 2.97682337567109e-95 1.21426446046793e-15 3.76384891727261e-17 7.18414545878796e-63 8.50623671952084e-08 5.85795948435849e-08 6.82668201697847e-11 3.15671114199424e-101 3.3397879780781e-212 3.07080908001148e-46 6.16255010291073e-08 0.00268619201743127 0.000575202245997188 0.00150979306135763 9.50923670517629e-08 3.79620422977764e-08 1.85338228265272e-28 0.000650179099182483 2.25858347356692e-07 0.0013801305658265 1.59130911845747e-37 7.71176390439641e-17 9.75842516541501e-14 2.80208433330232e-38 3.57225420064191e-05 2.59273825539891e-10 XM_005216725.1 LOC515828 PREDICTED: Bos taurus uncharacterized LOC515828 (LOC515828), 0.0 3918 100.00 0.956809167033936 XR_159155.2 LOC100505650 PREDICTED: Homo sapiens uncharacterized LOC100505650 (LOC100505650), transcript variant 2, misc_RNA. 5e-85 320 84.49 0.131335390039665 0 coding 1 1 1 1 -0.00422899791461529 0.970531522954246 0.152473656136261 0.177118135074707 ACGGGGACGGCATCAGGGGATGAGGGAGGCAGAGCTCAGAGCGGCACAGCTGCAAGCCCAGGACGGCGAGGACTCCAGCCGCCACCAGAGGCTGGCTCAGGTTCCTATGGAAGAATGAAACACAGCGAGGAGAAGAGAATTGCCGATTCCCAGGGGCCTGTGTCTGCCAGCGGCTGCTGAGTACCTCTGAGAAACTCTGCTTTGAGCTAATAGGAACCCCCTGTTCTGGGAAGATCAGTATATGGAACAAAAACCTCTGGGTGGACCCCTGGGCAAGATGAATTTGACCGACCATATGTTCCAGGACTCCAGCGAGAACATCACCACCTCAACGTCAGGCCCCACACTACCCAGCAGCCTAGACACAGCGGCCACAGCTGTTTCTGGCTCCATTGGTGTCGTGGCCCTCATCTTGCTCCTGGTGGGACTCTTGTCCGTGACTCTGAAAAAATGGAGGCATGAGAGACTATTTAAGAAACAACAGAAGCATCAGACCAACTTTCTCCACAAATCCTTGGAGCTTTCCTGCCATGCCGATGCCATATATTCCAACGTGATCAACCTGGCACCCAGGAAAGAGGATGACTTCGCTGTCTATGCCAACGTGCCCCCTTTCAACCGCCCCAGGAGGACATCACCAGACCACGTGGAATATGCCTCCATTGTATTTCACTGATGAGAGGCTCGTGAGATGCTTCAGAGTGGAGAGTCAGACCTGTGCCTATCTGTATCCTGATGCGGCTTTTGCTCTAGATATGTGTGTATATGTGTGCATGTGTGTGTGTGTGTCTTTGCACGTGCCTGTGTGTGTTCATGCCCGCCCATGCTCAAAAAACCATAATATGTATTCTGATGGAGGTAAATGACTTGGTATTTCTTCTAATTTATTGGAAGCAAGGTGCAGTTCTAATGGAAAGGGGTGACATCTGAGTGACAAGGGACATAGTCATTTCAGCCACTCTGAGCCAGAGGCAGGTTCCTGAGAGAGACTGGCCGAAAGAAGAGCCGTCTCTCTCCCCTGCCCCTCATAAGGCCAGGGCTGAGGAGCAGGGCTCACCCCACTCAGGGACCAGCTCCCGGACTTCGTCTCTGCTGTGCTGCCCTGTAAGGAGCTGACTCCCTGCAGAGGTTAACGCGTGCGTCACACTCAGGTCTGTGGCTGATCACCACGCACATTTTCACAGCAGCTTTCCAGGGCCATGCAGCAAGTGTGGAGGGAGACGGCGTGGGGGAGCTGCAAGTCCATGGGGTCTCAAAGAGTTGGACATGACTGAAGCAACTTAGCACGCAAATGCAATGGAGAAAAGAAAATTTCATTTAAAAACAAAGCTTATGGAAGCCACTTTCATCTTCGAGGATGATGTGATTCACATCGTTAAGAAAACACCTATTCTACGGATCCATTCCATCTATAGAGACTGGAGAGGGGAGATGAAAGTAGGAAGGAAACACAAAGATTTCCAAGCCTCTGCCTTCTTTTCTATTGATAATGGGAAAGTTCAAGAGCAGGCAACCCTTTGTCTTTAACACAGCTGTATGATGACCAGGTACCCTGATTTGTTGGGGATTTTCCTGGTGTACAACTGTGGTCCCAGCAAAATTATTATTAGATCCCCTTTCATTCTCTAAATTGTCATAGTTTGGATGATAGATTATGTGGTCACCTGTTCACAAGATTTTGAGAGTGCAAAAGCAATTCCAAGACCAATAAGGAAGGGAAAGCAAAGTTGTTTTGTACAATAAAGTGGGAACGGAATCGGGGTGGGAGTGGAGGAGGCTGCATGTACGGTGCCTTGGGGAGGTGCGAGGGCAGTCTGGAGGCCAAACGGAGCTAAAATCACATAAAGATTTCCACCACCATAAACCTTGGTAAAGCCCAGTGAACACAACAATTCCTGGTGCGGGTATTTAGGGGAAGGGGGCACCATGGAAAGGGAACCGAAGTCTACATCTAGGTCAGCACAGAGCAGAAATAAAGGGAAGTGGTAAGAGGTGCAATATGAATGAGCTGGACCGTTCAGAGGAAGGCTGAGCTCAGAGCCGGAAGAGAACACAAGAATGCAAACTCTCTGAAACTTCTCAGAAATCTCAGGGAGGGGACCAGAGTTTCGGAAGAACCTACAGTTGGGAGGTTAACAACGGTATTTAATGGGTAGTTTGACCTCAGCATGAATCTGGGTTGTAAAATTTAAACAGCTTCCTTTATGGTGAGACTTCTCAGAGGCTTCAATATGTAATCTACTTCATGAATAAAGTCCTTCATGAATAA EMBV3_33290 CCACTGGGGACAGCAGAGGTTAAGAGCTGCATTCAAACACAGGTAGTGCCGTGGGCATAA Gene BVT0102_364555 + 1 EMBV3_38332 GK000011.2:104015804-104128897 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06917 TGTACAAGTTTGTGGTTCCCAAGCCCCGAAGTGAATGTTCAAAGCCAGAGCAGCTGGTTG Gene GeneID:282477|SLC25A3:NM_174657:917_cdna Constitutive 0 NULL GeneID:282477 5 GENE SLC25A3 D1S155E MGC165858 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 EMBV3_26315 GGCAAAGGAAATGACAAGGGGTCGGGGTCTGTGAGATTCACTTCAGGGGAAAGATACAAG Gene GeneID:532597|WAC:XM_002692128:87_cdna UTR3_Alt 3 NULL GeneID:532597 13 GENE WAC NULL WW domain containing adaptor with coiled-coil EMBV3_24633 CAAGTAGAGGAGTTACTGTGAGCAAAAGGGTGCGGCAGGCTCCCTCTCTTTTTTAAACAC Gene GeneID:281291|M6PR:NM_175779:7_cdna Constitutive 2 NULL GeneID:281291 5 GENE M6PR CD-MPR CDMPR MGC140730 mannose-6-phosphate receptor (cation dependent) EMBV3_36075 TCAACATCATCAATGTGGTGTGCCCATTGCCCGAGGAGCCTGCCTTCTTCGGCCTCTATT Gene GeneID:518585|SSTR3:XM_002687691:69_cdna Constitutive 0 NULL GeneID:518585 5 GENE SSTR3 NULL somatostatin receptor 3 EMBV3_30252 AAAAGTCTGTGTTATCTTGGTGAGTGCTGTCAGTCCTGTTGGGCGCAGAGTACAAGCTGC Gene GeneID:532401|ZNF281:XM_002694236:180_cdna UTR3_Alt 1 NULL GeneID:532401 16 GENE ZNF281 NULL zinc finger protein 281 EMBV3_29367 GCAGACAGATATCTCTGAACTTGAAAACAGTCCATCATAGACAGCATGAAGCCAAAACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00453 ACCTCTAACAGTATGAGCCCCACCCCCAGATTAGCCAGTAATCCTGTAGGAAGGTACTGT Gene GeneID:516032|SMAP1:XM_002690007:9_cdna Constitutive 0 NULL GeneID:516032 9 GENE SMAP1 NULL small ArfGAP 1 EMBV3_34065 ACGACTGAAAGCAGGAAGGACAAGGCCAGCGGAGAGAAGAAGGAAATCACCTGAATGGCA Gene GeneID:100336676|LOC100336676:XM_002683892:2_cdna Constitutive 0 NULL GeneID:100336676 Un GENE LOC100336676 NULL single-stranded DNA-binding protein, ssb, putative-like EMBV3_11562 CCTGCCTTCCTGGCCCTCAGAAACAAGGTGGATTTGGAACCACTGCTTGGGTGTTTGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18548 ACTGTAACACGTGCAAACAGGGCATCAGTAAAACGTGCATGAGTGAAGAGACCAGCAACC Gene GeneID:539120|VEZF1:NM_001102227:42_cdna UTR3_Alt 2 NULL GeneID:539120 19 GENE VEZF1 MGC152435 vascular endothelial zinc finger 1 EMBV3_08725 CGCACATCCACGTGGACGGCGCCCCGGGAGAAGCATCGGCTGCGCCTGGTGGCCACTGAT Variant GeneID:319141|GCAT:NM_001075134:16_cdna 201^580 4 EMBV3_23396 GeneID:319141 5 GENE GCAT NULL glycine C-acetyltransferase EMBV3_16257 CAGCTGTATTCTGGTACAACCTCCTACGGAGTGGGGAAGGTGACTATCGAACAAGACATG Gene GeneID:507327|P4HA2:NM_001034293:40_cdna Constitutive 2 NULL GeneID:507327 7 GENE P4HA2 MGC127031 prolyl 4-hydroxylase, alpha polypeptide II EMBV3_11317 TAGAGCACCATTTGGCCAGTGCCCACGGCCTTTCCTGGCCGTGCTTTAGAGAAAAAAGAT Gene GeneID:506384|PARP16:NM_001083379:77_cdna Constitutive 0 NULL GeneID:506384 10 GENE PARP16 MGC142706 poly (ADP-ribose) polymerase family, member 16 EMBV3_03491 GTGACTGATTGGATGTAAGACATGAGAGTCATGGAAGTGTCTGGGAAGCTATCAGGATGC Gene BVV0102_274664 + 0 NULL GK000005.2:101469067-101495663 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17179 GATTCACCCTCCCTAATTAAAGAGCAAAGTACTGACCACAGTTATAAGAATGTCAGGGTG Gene BVT0102_032548 + 0 NULL GK000023.2:22044857-22088740 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22545 AAGATACTGACCTTTTGTCCCTATCGTCCTATCCTGCCCCAGCCAAGGAACCTTCACACT Gene GeneID:508359|MRPL49:NM_001014871:548_cdna Constitutive 1 NULL GeneID:508359 29 GENE MRPL49 MGC142600 mitochondrial ribosomal protein L49 EMBV3_26771 GATGCGGGTGGGCAGGACCTGCAGGCCCAGCTCTTATTAAAGGTGCTGGAAGTTCTGGAT Variant GeneID:508540|LOC508540:XM_002688371:213_cdna 214^565 1 EMBV3_13242 GeneID:508540 6 GENE LOC508540 NULL similar to genethonin 1 EMBV3_05498 GATGGCTTCTATGACATCAGCTCTGTGTGTGATTCCTTAGTCCCTGTCACCCCCACTTCT Gene GeneID:615505|TMEM176B:NM_001099145:721_cdna Constitutive 1 NULL GeneID:615505 4 GENE TMEM176B MGC165671 transmembrane protein 176B EMBV3_02434 ACTGAGTTCTCAAAAACTGAAGCCCAGTCAGGGGCGTCTCTGGTCCCTCTCCCTTTTCAT Gene BVV0101_027790 + 0 NULL GK000002.2:129338070-129351697 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103937 TCONS_00103938 1 XLOC_062252 Coding TCONS_00103938 XLOC_062252 Coding Coding IL28RA 2:129315263-129340590 j TSS77076 3981 2 TCONS_00103938_4 351 0.0547601105249937 7 0.843086156518992 0.000156547006631852 2.72648809803437e-05 0.000129721968910588 3.50543312250794e-05 6.94569841898613e-05 0.000131911324888219 3.94193615836196e-07 4.87419218116817e-05 9.87630281771956e-05 1.0791202694075e-10 4.30172234811197e-05 2.62550154754138e-12 6.91568529198692e-10 0.000373297815386841 3.48566938294516e-10 6.50687565959972e-05 0.000270289558163323 0.000118570030803263 4.70152892539276e-09 4.30030371423107e-05 0 5.18353163606823e-12 1.10792239103878e-05 0 1.84055446459938e-06 6.86735327547206e-05 3.20929748347227e-05 1.75771009598942e-06 8.29220485927908e-06 2.66020858925365e-12 XM_005203260.1 IL28RA PREDICTED: Bos taurus interleukin 28 receptor, alpha (interferon, lambda receptor) (IL28RA), transcript variant X1, mRNA. 0.0 5782 100.00 0.805074101984426 NM_173064.2 IFNLR1 Homo sapiens interferon, lambda receptor 1 (IFNLR1), transcript 0.0 933 67.36 0.777694046721929 TCONS_00103938_4 sp|Q8IU57|INLR1_HUMAN I28RA_HUMAN Interleukin-28 receptor subunit alpha; 2e-87 277 54.10 0.997150997150997 0 coding 0 0 0 0 -0.135032372286646 0.419877446697202 0.00832693722138064 0.867802137468797 ATGACGGGGGCCCGACGCTGGGCCCCCCTGCTCCTGTGTCTGCTGCAGTCCGCTCCAGGGCGGCCCCTCCTGGCCCCTCCCCAGAATGTGACGCTGCTCTCCCGGGACTTCAGTGTGTACCTGACGTGGCTCCCAGGGCCTGGAAACCCCCAGAACGTGACCTATTTTGTGGCCTATCAAAGCTTTGCACCCCCCAGACGGTGGCGGAGAGTGAAAAAGTGTGCAGGAACCAAAGAGCTGGTGTGTTCTCTGATGTGCCTGGAGAAGCAAGACCTGTGCAACAAGTTCAAGGGGCGTGTGCAAGCAGTTTCACCCAGTGCCAGGTCCCCCTGGGTAGAGTCCAAGTTCATGGATTACTTCTTTGAAGTCAAACCTAGATAACCTTGATCAGACTGTCCGTAGAAATGGACATTAAAGATTCTGCCAGTGAGGGCTCAGAAGGAAGTGAAGAGCGTCATAGAGGAAACCTACATCCCCTTCAGACCCGGTTTCCAGACACTCGCCATGGCCAGCCAGTCCAGATTCCTCTCCAGCCAGACACCAGTGGGCACCACTGCCTCAGCGCCAGAACCATCTACTTCTTTGGCAACCCTAAATACAGCGAGTTCTCCGAGCCCACCTGCTTCTTCCTGGAGGCCCCGGGATCCAACTGGGCCCTCTTGTTGCTGCTACCATTTCTGCTTCCACTGCTGTTGGCTGTTGCCATAGGGCCTGTGATGTGGAAGACCTTCAGGGAGAACCCCTGGTTTCAGCAGACAAAGATGCCACAGGCCCTGGAAGTGACCAGAAGGGTCAGGCTGACCTCTAGAGTCAGGGCCCCAGCCCCCGTCCAGGCCAGACCAGAGAAGGACAGCGCTGAGGAGAAGGACGGTGAGGAGAGCACAGATGAAGAGGACCTGGATCCTGGCGTCAGCTTCCAGCCCTATGTTGAACCGCCGCCCTTCCTGGGGCAGGAACCCCAGAGCCCGGGGCCCACCAAGGCAGGAGAGCCCTGGACTCCTCTGGTCCAGGGGGAAGGGTCCTCTGCCTGCAGTTCTTCAGGCAGAAGCTGGGTCAGCACTGCGGGGTCCTCCTCCCCCTGGGATGAGGCTGGATCCTCGGGCTATTTGGCCAAGAAGGGGCCAGGCCAGGGGATGGGTCGGGAGGAACACCAGAAGCCTCTCCCACCACCCAAGGACTCCAGTTCCCTGGGAGAGCCCTCCAAAGACAACCTCTCCTCCTGGACCAGCTGGGGCTTATCATCACCAGGGCTGAATCTAGTCCCCGGAGAACCCCCAGTTTCTCTTCGGACACTGACCTTCTGCTGGGACAGTAGTCCTGAGGATGATGAGGGGGAGGAAGAAGAGGAGGAAGAGGGCTGGAGGGAGTCAGAAAGTGAGGACAGCGGTGCTGGCAGCTGGGGGGCTAAGAGCCTCCAGAGGACCGAGGTCAGACCCTTGGGGCATTACTTGGCCAGGTGAGCTGTGCCTCCGAGTCTGGTTACTGCTGAGCTTTCTGGGGACCCAAGACATCATCAAGACTTGAAATCCCGGGAGCATCATTGCTGGGGCAGCAGAGGGTCCTCAGAGCACCTCGGAGAACCCCAGCTATTAGAAGCCGTCCACCAGGCTGAGCCGTCAGAAGCCACCTGCCCTATGACCTGCTTGCTTTGCACCAAGCACCAGGAGGGGTGGAGACAAGAATGCGTGGAGGTCAGAGGTTGGTTGGGTGTAGATCACCCCACTGCCCCTGGGGTGATAGGCCAGCTGGAAAGATTATCTCTGGACACCGTGAAACGGGCAACGTCAGGTCCCAGCGGACATGAAGGCCGACAGCACAAGGGCCCATCCGGCTTTGGGGAGAGAAGGACTTGGAGCGCACCTGGTGGAGCGGAGACTCGCAGCTTTCTCCAGCATCCGCTGGGCTTCCGCCTCCGCAGAACTCAGCCTTCTGGTTTATGAGTTCCCTAGGGTGGGCCCTGGTGAAGAAAAATCTAGTTGGCCGAGGGTGTTGGAGAGGCAGAGGAAGGGGAAGGGCATCGTCATTGAAGGCCCAGTCTCTGAGTCACGCGTTTCACAATCTAGAATATCAGACAGACCTGGGCCCAGATCCCAGCCCTGCCATTCACCAGTTGTGTGGCCGGCGGGGAGACACCCTCCTCCTCTGTGCCTGAGTCTCCCCACCGCAGCTACCCCCTGGGTCGTGGCGAGAGGTCCGACAGACGCGTGGTGCCTGCCGCATCGTTGGCACTCATCACGCGGTGACCAGAGAATTCTCCCATCCACCCAGGCTCCGGGCGGGTGTGGGCACCACTGGGCATCTCCCACCTGTGACCCCAAACTCAGAGTGACTGGCTTCTCACTCCAAGTCTCCCACCTACCTCCTGCCCCCACTGCCCCCCGTCTTGTGGTCAGGAAACTGAGTTCTCAAAAACTGAAGCCCAGTCAGGGGCGTCTCTGGTCCCTCTCCCTTTTCATGGCAAAGAGCCAAATGGTGCACTGTCTAGGGAGTCTGATTAATGGTGGTGGGGAGCAGCCCAGCAGGGAACTGGGCCCCGGGCCTGTGATCCCCAGCTTAGCACTTTAGACCCTTCAGTTGCCCATTCTGGTTGTAAAGGTGTCCCATTTCCCTTCCGATTTTGAGAAACCACTGTCTCTGGAAACAGGTTCTTGCCCGGGGGTAGTGATGGATGTTCTCAAACAACTGATTCGGTAACCTAATTTTGTCAGCTTTGTGGCCCTGCAAGAACCACAGAGATCAGAGCAAACCTTGCCTCTGCCATTTCACCTGCCAGGACTTAATACATTTTTCCATTGATGCAAAAAACATCTTCATAAGCTTTGTAGCCACAGGGCTGTGCTGTTTAGAAGTCAGCATAAAGGTATAGCATTGAGAGAATGATCTGGAAAAGCTTCTCAAACTTCCAGGGCTTCTCAAACTGTGCTCCCGAAAGACCTGGGCTTCACAGGAAGAGGAGTCTCAATCTCAGGGGAAGCTAGAGGTTCCCCCAGGTTCAACCAGAGCAGCCTCCCCAGACCCCTCATTTTTCTCCAGCACTCTCCACGTGCAATGGTGCTTGGGAGTCTCCACTGCTAAAGAAAAAATTAGCAAACCCCCTTTGAAGTTGAAAATCCTGTCTTCTGTTTCAGATGAGGAAGCGGAAATGTTGACTTCACTGTATACGTCGCTAAGAGTGAGGTTGGGTCTCTGGCCCGCCTGGGCAACCCCGATCCCCTTGGCCATGTAAACAGTACCAAGGTCTCGGCAAGGGGCACGGGGTTGCAGGGGCCTTCCCCACTGCTGGGAGGCATGCACACGCTTGCGTGCCCAGGCACACACACGTGCCTGTCTGCAAGGGTTTCTCTCCCATGAGGCTTGTCTGCATCCATCATGCAACACAGGAGAAGAAAAACGAGCTGTGCCTGTGGCACTGGGGAAGGCCCAGGGCCAGTTCCCAGGGAAATACCCAGACCAAGCCCGGTGTCCTTTCTGGAACCTGTCGAGCTGCTTCAAGGAGGTAATTCCAAGTCCCTAAAAGCTATCATCACTGTTGTCTTAGGCTGGTGTCAAGTAACTAACCACTGTATTCTGAAACCTTGTGTGTTTTCTAAGTATTTTTTTCAAAGTTTAATTTCTGACATAGGCTGAACCCTCCTTGAATTCTAAAAGTCCAGCTCCTTCATGGTCATTAGGTTATAAACAAAAAACTATGGGCAGCATTAGGAAAGAACATGCTGGCCAGTATTATCATTTGTTAGGTGTAGTCAGCACTGAACTGTTTACAAAGCCCTTTCATAAACTCATTGGCCAGGAACTGCATAGCTTGAGCTCCAAAGCTACATGTGAAGGACAACGGGGGTGGAGTAGGCGATGCCCTAAGTAAAAGCAACATTCCGATTCTTTAGGGTACTGAGAAGTTTATATGTTGCTCTGAGATATTTGTATTTATTTCTAGCTTTATTTTATGTTTATATCATATTTAAATAATTTCCTAATGTTTGT EMBV3_40337 AGAGGTGGTCAGGCGCAGCGTGGTCTGTAGTAGGTATTTTGGGTGCTTAGAGATTGGTCA Gene GeneID:511461|MKL2:XM_002698031:238_cdna UTR3_Alt 2 NULL GeneID:511461 25 GENE MKL2 NULL MKL/myocardin-like 2 EMBV3_35421 GAGAGATCGCGGCGCTCACGGACTTCTCCGAAGGTGCTGGACGAGTGTCAGAACCAGCGG Variant GeneID:516536|C1H21ORF63:XM_002684582:87_cdna 161^357 3 EMBV3_25731 GeneID:516536 1 GENE C1H21ORF63 MGC155009 chromosome 21 open reading frame 63 ortholog EMBV3_19874 TGGGCAACTTCGCCAAGGCCACTTTTGATGCCATTTCCAAGACCTATAGTTACCTCACCC Gene GeneID:286867|RPS2:NM_001033613:42_cdna Constitutive 2 NULL GeneID:286867 25 GENE RPS2 MGC126925 RPS2E ribosomal protein S2 EMBV3_18409 GCCACCATGTTGTTAAAGAAGCCGCTCCCAAGTGTCAAAAAGCTGCTAAGGAGGAAGACC Gene GeneID:530550|ARHGAP28:XM_002697796:395_cdna Constitutive 0 NULL GeneID:530550 24 GENE ARHGAP28 NULL Rho GTPase activating protein 28 EMBV3_13424 CTGAGACTCCCGGCTTGGAAGAACTGACAGATTTGATGCAGAAGTGCTGGAGCCATGAGC Gene GeneID:507427|RIPK3:NM_001101884:89_cdna Constitutive 1 NULL GeneID:507427 10 GENE RIPK3 MGC152488 receptor-interacting serine-threonine kinase 3 EMBV3_15562 GTGGGTCAGCTTTTCACTTGACTCCACAGAACCATTGGAAATCCGCAGAACCCCACCTTT Gene BVT0102_040853 + 0 NULL GK000011.2:100215814-100219223 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026264 TCONS_00026263 TCONS_00026265 TCONS_00026261 TCONS_00026260 TCONS_00026267 TCONS_00026269 TCONS_00026262 TCONS_00026268 TCONS_00026266 1 XLOC_014954 Coding TCONS_00026260 XLOC_014954 Coding Coding TOR1B 11:100182058-100217275 = TSS18861 2574 1 TCONS_00026260_2 309 6 0.927078600636075 0.00397305746035208 0.00514957357689492 0.00395042036293626 0.00378083993836691 0.00243066958640678 0.00185551106781402 0.00145352948269523 0.00206015705179479 0.00295195875660877 0.00119782081100555 0.00056397051489995 0.000923437615724549 0.000781735364025819 0.000974978120579363 2.91849322337467e-05 0.00642330214596432 0.00383710913048702 0.00288436539376887 0.00342761590467352 0.0031155110943845 0.00198620419076101 0.0018253276041118 0.00485435279742571 0.00515421293344065 0.0041607490562777 0.00507939396552614 0.00265839040588234 0.00106581570376281 0.000549282410875338 0.00182433915757669 XM_613495.7 TOR1B PREDICTED: Bos taurus torsin family 1, member B (torsin B) (TOR1B), 0.0 4432 100.00 0.954156954156954 NM_014506.1 TOR1B Homo sapiens torsin family 1, member B (torsin B) (TOR1B), mRNA. 0.0 1072 86.13 0.356254856254856 TCONS_00026260_2 sp|O14657|TOR1B_HUMAN TOR1B_HUMAN Torsin-1B; 0.0 538 93.38 0.877022653721683 1 coding 0 0 0 0 0.0636449182399594 0.651770666530874 -0.011498160853421 0.882731028214713 ATGCATGAGGACTCGGGAAACGGTGTCAGCAAGGTGTGGACCAGGGCGACGCTGTCTCTGGTCCTGAAAATCTCCTCCAGCTGCGACCCCAAGGGCTGTGCCCTACCCCGCAGCAGAGCCCTCAAGCAGGACTTGGAGGAGAAGCTGTTTGGGCAGCATCTGGCCACAGAGGTGATTCTCAAGGCGCTGACCGGCTTCAAGAACAACAAAAATCCCAAGAAACCACTGACTCTCTCCTTACACGGCTGGGCTGGCACAGGCAAGAATTTTGTCAGCCAAATTGTGGCTGAAAATCTTCACCCCAAAGGCCTGAAGAGCAACTTTGTCCACCTGTTTGTGTCGACCCTGCACTTCCCTCATGAGCAGCACATAAAACTGTATCAGGACCAGTTACAGAGGTGGATCCGGGGTAACGTGAGTGCATGTGCGGGCTCTGTGTTCATATTTGATGAGATGGATAAGTTGCACCCGGGAGTCATTGACGCAATCAAGCCGTTCCTGGATTACTACGAGCAGATTGATGGCGTGTCTTACCGGAAGGCCATCTTCATCTTTCTCAGCAACGCAGGCGGAGACCTCATAACTAAGACGGCCCTTGACTTCTGGCGGGCTGGGAGAAAGAGAGAGGACATCCAGCTGAAGGACCTGGAGGCGGTGCTGTCTGTCGGAGTCTTCAATAACAAACACAGTGGCCTGTGGCACAGCGGCCTGATAGACCGGAACCTCATCGACTACTTCATCCCCTTCCTGCCCCTGGAGTACAGACACGTGAAGATGTGCGTGCAGGCGGAGATGAAGGCCCGCGGTTCCGCCGTCGATGAAGACGTCGTCACCCGAGTGGCAGAGGAGATGACGTTCTTCCCGAAGGACGAGAAAATATACTCAGACAAGGGCTGCAAGACCGTGCAGTCACGGCTGGACTTCTACTGAGCCCTCGTGCAGGCGGGCTGAGACGCGAGCAGGTGCCCAGCAGACCTGGGGCCGGGCCTGAAGAAGCACTTTGAAGACCTCCTCGGGGTTTGCTCATTTGCACCTGTGGACTCGCGGGATCCGGAAGGTTCTGAGGGTTGATTTGTGAAATGATGCTCCGCTGTCAAGTGAACTTGTGTTGCAGCATGACGGCGGCGCAGCTGTTCACAGATGGAAATGAACTTTTGAAATCCGCCTCCCCCACACACTTAACTGACCTTGACAGAAGTGCCTTGAGAACAGAGGCCAAGGACTCTTTCTGACCCAACGGTACCCTCATCCCAGAAGCTGAACTAAAGTTCAGGGGCTAATGCAAGCCAGGGAGCATTGGTTTTCACCTGCCAGAAACACTCTTCAGCTCTAGCTCTTTTTCTTTTACAGAACACGTTCACTAAGATGAAGTATTTTCAGGTAACATTGGTGGCACCTTCGGGCACAGATTGTCCAGTGGGAGAACCCAGGTCCAAAGGCCAAGCACACGGCTGGGCGAGCCGTCTGCTTGTGGGGTGGGGGCTCCGTGCCAGGCCCCTGCGGCCCCACAGAACGGGCAGGACCTCTCCTTCTGTCCGCGGCTTTGCTGCTGTTTACAACCCTCGTCGTGAGATTCCATCCCCAATTCTCACTTGGTGTTGACCGCAGCCTTTCTGGTACTGCTGCTCCTCCTGAATTTCAGCCAGGGCTCCGGGTCCCACCAGCCATCTCATCTCTAGAGATGGATCAGAACACAGCCGTTGGCTTCGAGTTTGAGTCCTTGGTTCCCACGGTGGAATGCTTGTTACAGTTTACATGTGGGTCAGCTTTTCACTTGACTCCACAGAACCATTGGAAATCCGCAGAACCCCACCTTTCTCCACAGATGACACGTGCCAACTGGATGGTCAGCTTGCAGGTTCTGCATTGCCAAAGAGAAAGTATTGTACACTAGAAACGCTTGAGTTTTTAAGAACATGGCTATTTTTAATAATGTTTTTACTGGGAATCTTACATAATAGAGAAACAAAACGTTGCTTATTTTAAAACATGTGAAGGGATAATTTCCTGTTTCTTTATCAGATGCTCTTAAAACAGATGGTCTTGGCTGGTCCTGGGTGTCATCTAAGAATGATGTCCTTTATGGTGGTGCCAGGCTGCACTGCCCTGGCCTTGGGGAAATAAGACTTTGATTCCAGCCAGTGTGAATCGCTCCATCTTGTGGTTGCAATGCAACTGAAGACGCGTAATGAGAACATGCAGCTTTTTTATATGTATAAGATGTGGCAGAATGAATGTTCCTACAGCATGGCAGTGCCTTATAGAGGATCACACTTAGTCTTTAAAAAATGTCAAGGTGAGGCTTGAAACTTTTAGTACCTGTCTTCAAGTTGGATCTAAATTAAATTTCTTTTATAACCTTTTGGGTGTCTGGTCAGGAGGAGATAAGATTTCTTGTTTACAATGATGCAATAAACTCAAGACGTGTTGGCTACCTTTGGACTGCTGTTACTGACTTGTAACTTGAAAAGGCCACAGATGCCCATGGCCCAGCCTCCTCACCCCGAGTAAGACGTAGATGAGTTTGGACTGACCTACTGAATGTCAAATAATAAAGCTTAAATTTTATCATGA EMBV3_28795 TCCTGGCATATATACTGGGTTCACCACTTCGTTTTCCAAAGTTTTATCTGAGAGGCTCTC Gene BVT0102_341812 + 1 EMBV3_03560 GK000027.2:5948524-5962939 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25087 CAGCGTTATGTGATGCAGAACTTGACGGTACAGTAAATTCACTGGCTAGCATTTTTCCTC Gene BVT0102_021009 + 0 NULL GK000003.2:34455566-34511152 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169561 TCONS_00169562 TCONS_00169564 TCONS_00169557 TCONS_00169560 TCONS_00169563 TCONS_00169556 TCONS_00169555 1 XLOC_103395 Coding TCONS_00169556 XLOC_103395 Coding Coding WDR47 3:34430045-34507990 j TSS126925 4152 1 TCONS_00169556_5 919 0.0291425818882466 15 0.946923432207739 0.0111838060071062 0.0124179222263846 0.0135008405895102 0.00721835687123853 0.00846312214676993 0.00416085958274857 0.00771883574368386 0.00913429173965512 0.0123033166865545 0.00173128542702194 0.000526463328429789 0.000457849718312254 0.000619668416318936 0.00268542479786461 0.000877976800701303 0.00889217165650449 0.00505921457696322 0.00713835113305066 0.0187517532165388 0.016273415885671 0.00512057279253685 1.25259355301585e-06 0.0026962505771168 0.00241479175619301 0.0156458319585135 0.0157730970295291 0.00599091187320965 0.000460748086064439 0.000581797580951521 0.000819597933945419 XM_003581964.2 WDR47 PREDICTED: Bos taurus WD repeat domain 47 (WDR47), transcript 0.0 7184 100.00 0.959055876685935 NM_001142551.1 WDR47 Homo sapiens WD repeat domain 47 (WDR47), transcript variant 3, 0.0 5694 91.74 0.958333333333333 TCONS_00169556_5 sp|O94967|WDR47_HUMAN WDR47_HUMAN WD repeat-containing protein 47; 0.0 1821 97.17 0.998911860718172 1 coding 0 0 0 0 0.0766276457035196 0.484636376907094 -0.0681041444268052 0.347664904722557 CAGGCTGCTCTCCTTATTTCAAGGCCTTGATCACAGCAAAATCCCTTTTACCGTGCAACATTCCCAGATTCTGAGGATTAGCACATGGACATCTTTGGGGGGCTGTTACTCTGCCTACCACAGATTCTTAGTAACAGGATCTAAACAGGGTGTCACACATTCCATTTGGCTATCGACATGACGGCTGAAGAAACAGTGAATGTAAAAGAGGTCGAAATCATTAAGCTAATCTTAGACTTCTTGAATTCAAAGAAGCTCCATATTAGTATGTTGGCCCTTGAGAAGGAAAGTGGAGTCATAAATGGCCTGTTTTCTGATGATATGCTTTTCCTGAGGCAACTAATCCTTGATGGCCAATGGGATGAAGTTCTTCAGTTCATTCAGCCTCTAGAATGTATGGAAAAATTTGACAAAAAAAGGTTTCGTTATATTATCCTGAAGCAGAAGTTTTTAGAAGCTTTATGTGTTAACAATGCAATGTCAGCAGAAGATGAGCCCCAGCATCTGGAATTTACCATGCAAGAAGCTGTGCAATGTTTACATGCCCTGGAAGAGTACTGTCCTTCTAAAGATGACTACAGCAAGCTCTGTTTGCTTTTGACTTTGCCTCGTTTGACCAATCATGCTGAATTTAAGGACTGGAATCCCAGCACTGCACGAGTTCACTGCTTTGAAGAGGCTTGTATCATGGTTGCAGAATTCATCCCTGCTGATAGGAAGCTAAGTGAGGCTGGTTTTAAAGCAAGTAACAATCGTTTATTTCAGCTTGTAATGAAGGGCCTACTTTATGAATGCTGTGTAGAATTTTGTCAAAGTAAAGCAACAGGAGAAGAAATTACAGAAAGTGAAGTACTACTTGGAATTGACCTCTTATGTGGTAATGGGTGTGATGATTTGGATCTGAGTTTATTGTCATGGCTCCAGAATCTCCCATCTTCGGTCTTCTCTTGTGCTTTTGAACAGAAAATGCTTAATATTCATGTTGACAAACTTCTAAAACCCACAAAAGCTGCATATGCTGATCTTTTGACACCTCTTATCAGCAAACTTTCTCCCTATCCATCATCTCCAATGAGAAGGCCTCAATCAGCTGATGCCTATATGACCCGCTCTCTGAATCCTGCTTTAGATGGCCTCACTTGTGGACTGACCAGTCACGATAAGAGAATCTCAGACCTTGGGAACAAAACTTCTCCAATGTCACACTCCTTTGCTAACTTCCATTATCCAGGAGTACAAAACCTCAGCAGAAGTCTCATGCTTGAGAATACAGAATGTCACAGTATTTATGAAGAATCCCCTGAACGTGATACACCTGTTGAGGCACAGAGACCTATCAGCAGTGAAATCCTGGGCCAGAGTTCAGTTTCAGAAAAGGAGCCTGCAAATGGAGCACAGAATCCAGGACCAGCTAAGCAAGAAAAAAATGAGCTTCGAGATTCAACAGAACAGTTTCAAGAATATTATAGGCAAAGATTGCGCTATCAACAGCACTTAGAACAGAAGGAGCAACAGCGACAGATATACCAGCAGATGCTGCTTGAAGGAGGTGTGAATCAGGAGGATGGTCCTGATCAGCAGCAGAATCTTACTGAACAATTCCTTAATAGGTCCATTCAAAAGCTCGGGGAATTAAATATTGGAATGGATAGCCTTGGTAATGAGGTACCAGCGCTCAACCAGCAATGTAATGGGAACAAAGGCAATGGATCTAATAATTCTTCTGTAACTAGTTTTTCTACACCACCCCACGACTCTAGTCAGAGATTAACCCATGATGCTTCAAGTATTCATGCAAGTACTCCTCGTATTCCTGGATCAGTAAATCATATGCCTTTTCTTGAGGAATCACCTTGTGGAAATCAAATTTCATCAGAACTTTCGATCATTAAGCCACCTCTTGGAGATTCTTCAGGGAATCTATCAAGATCAAGAGAGGAAGAGGATGACAAATCAAAGAAGCAGTTTGTTTGTATTAATACCCTAGAAGACACACAAGCTGTTAGAGCAGTGGCTTTTCATCCAGGTGGTGGTCTATATGCTGTCGGTTCAAATTCAAAAACTCTGAGAGTATGTGCCTATCCAGAAGTGATTGATCCAAGTGCACATGACATACCTAAGCAGCCAGTGGTACGTTTTAAAAGGAATAAACATCACAAAGGATCCATTTACTGTGTGGCCTGGAGTCCCTGTGGGCAGTTACTTGCGACAGGGTCAAATGACAAATACGTCAAAGTGCTGCCCTTCAATGCAGAGACTTGTAATGCAACAGGACCGGATCTGGAATTTAGTATGCATGATGGGACAATTAGAGACTTGGCATTTATGGAAGGCCCAGAAAGTGGTGGAGCTATTTTGATAAGTGCTGGAGCAGGGGATTGTAACATTTATACAACTGACTGTCAGAGAGGACAGGGCCTCCATGCTCTGAGTGGACATACTGGGCATATTTTAGCACTTTATACTTGGAGTGGCTGGATGATTGCATCTGGTTCCCAAGATAAGACTGTTAGATTCTGGGATCTTCGAGTACCAAGCTGTGTTCGTGTTGTTGGCACAACATTCCATGGAACTGGCAGTGCAGTGGCATCTGTAGCTGTAGATCCTAGTGGCCGTCTTTTAGCCACAGGACAAGAAGATTCCAGCTGCATGTTATATGACATAAGAGGAGGAAGAATGGTGCAAAGTTACCACCCTCATTCCAGTGATGTTCGCTCTGTCCGATTCTCTCCTGGAGCTCACTACTTGCTAACAGGATCCTATGACATGAAAATAAAGGTGACAGACCTACAAGGAGACCTCACCAAACAGCTTCCTATAATGGTGGTGGGGGAACACAAAGACAAAGTGATTCAGTGCAGATGGCACACCCAGGATCTTTCCTTCCTGTCATCCTCTGCAGACAGAACTGTAACCCTCTGGACTTACAATGGATAGAGTACAGCCACTGTCAATCTATGCAGTGAAAGCAGAGACTTAAGACTACTGAGTTGTGAACATTACGAAGCTGAAGAACATGGGTTGACCTGGAAAGTGGCTTAGCACGAGGAGGCCCCTTATTACCATGTACCCCTGTGATAGGAGCTGTTGGGTGGTGTTATTCTGCAGTGCTTTGAGTCTTCCACGTGAGCTCGTGCTGCTGTGACCTGCTGTATGTAGTCTTGTTGCCAAAGTCTGCGGAAGAGCTCTTATGTTGTCAGTGTGCACTCAAAGTCAAGGTGGATGATGTGTGTTCGGTTTAGTATTAAATGCATTCCTTGATCTTTGCCTAAATAACAGTTTTATATACATACTGAAACTGAACTATACTTTAAGCATATTACTACATGTAACGCAACCAAGTTCTACACAGATTAAACATAGGTATTCAGAAATTACTTTTGCTTTTCTCACAACCCCTGAGGATACTGTATCACTTTTCAGCTAGAGGTCAGAATTTTATGTCTCTCCAGAGTTACATTGTTACTTTAACTAAGGATCATTATGGAGTTTTAAAATGGATGGAAAACTGCTTCTTAGTGCATTATGTGGTATAGGCCTTTTCTTTTTTCTTAAACCCAGGGATATAATTATTACTTTGTCATATTATTTTGTTTCAGGCTTAAAAGGTAAACGTGTTTGCTTCAGAAACTTGTTCATTTCAATTTTTTGAATGCAACAAGATACCTCCCTTCTAAACTGTACTGTAGGCAGAGCAGCAGCGTTATGTGATGCAGAACTTGACGGTACAGTAAATTTACTGGCTAGCATTTTTCCTCTTAAAAATTTAAGACTTTGCCATAGACTATAGCATGGCTTGAAATGCTATGTCTGCATGATAATTTAAAATGGGAAATTTAAATTTTGCACTCCAAAAGCTTATTTGGACTTTTTTTCTTGCACTGTTTTGTGTAATTCAGAATAATGGTTTTATTTCTATGGTATTGTAGATCCTAACATTTATGTACCTTTATTTTCATATTGTACAGTAATTTACTTTAAATTATTAAATAGGCTATTTATTTTAAATGCATTTGAGTTGGTTCTAATTATTGAACTGTCTGTGCACTGTATGTAGCAAGCATTTTTAATCTATTGTATACAAGTGGAAAAGGTATTAGAAGTGTAACTGTGCTATTATTTCAATAAAGACCTCTTCACACCTAAACTATT EMBV3_28919 ATCCCTGGTCTGGGTAGATTCCCCTCCATGCCATCCAGCAGCTAAGCCCGTGAGTAACTA Gene GeneID:618054|PROM1:XM_002688467:41_cdna Constitutive 1 NULL GeneID:618054 6 GENE PROM1 NULL prominin 1 EMBV3_12910 TTATAGGAACAATGGTTGTAAATGCAGAAGATAAGGAATATCTTCTGATCGTCATTCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24274 GTCACAGGTGACTGATAAATCTTGTCCAAGGATGAGATAAATGACTGCAAAGCTTTTGAG Gene GeneID:281058|CD69:NM_174014:4_cdna Constitutive 2 NULL GeneID:281058 5 GENE CD69 NULL CD69 molecule EMBV3_28350 GATAGCTGCTGTCAGAACCCCCTTTTAAGGGCCAGGAGTCAAAGATGAGCAAGAAGAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24608 CTTGTGCACACCTCACTTTCTCGCGGTGATGGAGTTGTTATTTGTTCCTGGAGAGGGTGT Gene GeneID:614791|CCDC130:NM_001076344:46_cdna Constitutive 0 NULL GeneID:614791 7 GENE CCDC130 MGC10471 coiled-coil domain containing 130 EMBV3_40843 AGTTACAGTAGTGGACTGGGGAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAGTAAGT Gene BVV0101_001246 + 0 NULL GK000018.2:45109238-45161779 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37840 TGGACACCAGAGTGTGTGGCTTAAGGTCAAGAAGTCAGGTAGGAATGAAAAGAGGCGAGG Gene GeneID:505379|VAMP3:NM_001045915:31_cdna UTR3_Alt 2 NULL GeneID:505379 16 GENE VAMP3 MGC128311 vesicle-associated membrane protein 3 (cellubrevin) EMBV3_19560 ACAACCCATTGCATGAAGCTGCAAAAAGAGATATAGTGGAAATGCTGTTTACTCAACCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36709 AGGTGTTTCTGATTCTCAACTGCCTTGCAGATTTACTATTCTGAAGGTGGACAAGCTACA Variant GeneID:505937|VSIG1:NM_001045930:16_cdna 117^280 3 EMBV3_10283 GeneID:505937 X GENE VSIG1 MGC137313 V-set and immunoglobulin domain containing 1 EMBV3_29438 GTTTCTCACTCTCATATTTCACCAGTAAAGGCAAATCCTCCTCCAGTACTAGTCAACACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12839 AACAGGGAGCACTCTGGTTGTGGTGCCTGGCCTTCTTGTTGCAGCGGCTTCTCTTGTTAT Gene GeneID:786771|LOC786771:XR_083612:702_cdna Constitutive 0 NULL GeneID:786771 2 PSEUDO LOC786771 NULL similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) EMBV3_30709 TTCAGTCAGAAGTGAGGGCCAGTTGGGAGAACCAGTGTGTGTAGCGTCTTTGGTTGCTGT Gene GeneID:508820|MGC151962:NM_001075373:98_cdna Constitutive 0 NULL GeneID:508820 X GENE MGC151962 NULL similar to melanoma antigen family A, 10 EMBV3_42711 CTTCCTCCAGCGCTACTACCAAGTGGTCCAGTATCATGTGCATGGACCACCTGGAGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10292 GAGAAGGACATTGCGGCCCATATCAAGAAGGAGTTTGACAAGAAGTACAACCCCACCTGG Gene GeneID:787825|LOC787825:XM_002696732:44_cdna Constitutive 0 NULL GeneID:787825 21 GENE LOC787825 NULL similar to dynein light chain 1 EMBV3_02479 ACCTTGGGTCACTGGATACACATCTCCCCAGAAAAACAAATCTGTTATATACACTATTGC Gene BVV0102_207818 + 0 NULL GK000003.2:49759102-49770191 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20342 CTCTCTCCAGGTCCTCTCACTGAGCCCAGATCTGCCACAGGACGCAGCGTAGACTTGTCT Gene BVV0102_159962 + 0 NULL GK000009.2:105157157-105508312 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40940 TCTAGTCCAGCTCCCAGAACCAGCGTGGAACCCAGTAAGCACTAGCAGGAAGGAATTTCA Gene GeneID:514705|PTCD2:NM_001035298:115_cdna Constitutive 1 NULL GeneID:514705 20 GENE PTCD2 MGC128066 pentatricopeptide repeat domain 2 EMBV3_28435 GGGCACCTTTGTGTTTTTGCCTTCAACCTTGGTTCTGTGATTTGGATGTCAGCAACTTCC Gene BVT0102_068907 + 0 NULL GK000012.2:31820811-31863552 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036732 TCONS_00036735 TCONS_00036724 TCONS_00036728 TCONS_00036734 TCONS_00036729 TCONS_00036727 TCONS_00036730 TCONS_00036733 TCONS_00036722 TCONS_00036726 TCONS_00036731 TCONS_00036723 TCONS_00036725 1 XLOC_021219 Coding TCONS_00036735 XLOC_021219 Coding Coding PAN3 12:31858285-31982596 = TSS26677 5177 1 TCONS_00036735_2 741 19 0.958506958410426 0.000531768856759336 0.00127249358208797 0.000726625632634335 0.00138942731432159 0.00109651366372016 0.000277898250413097 0.00149018917176426 0.000708468273126483 0.00196685686718055 2.43680811462473e-08 0.000349156559350176 5.59254902520643e-05 3.85731959664356e-05 8.49173521195114e-105 7.43388444701586e-07 0.0037889420201353 5.13451909924757e-52 2.88652652099907e-06 0.00211496694091916 0.00134110954349824 0.000326229815982584 0.000460784304723352 0.000444355732624939 6.66490667054751e-20 0.00261953361176325 0.00169026035860496 0.00121715908221886 0.000534569470223765 0.00015208842631302 1.45610367635417e-15 XM_003586703.2 PAN3 PREDICTED: Bos taurus PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) (PAN3), transcript variant X1, mRNA. 0.0 4010 100.00 0.42920610392119 NM_175854.7 PAN3 Homo sapiens PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) (PAN3), mRNA. 0.0 6929 89.74 0.998454703496233 TCONS_00036735_2 sp|Q58A45|PAN3_HUMAN PAN3_HUMAN PAB-dependent poly(A)-specific ribonuclease subunit 3; 0.0 1465 97.98 0.998650472334683 0 coding 1 1 1 1 0.130151283902907 0.782037565036762 -0.0793562990326608 0.136493067759811 CGGCTGGAGGAGCCGGGCCGCCCGCGGGGCCCAAGAAGCCGGACCTGGGGGGCCCCGGGCCCGGAGCCGGCGGAGGCGGAGGTGGCAACAGTGGCGTCCTCGACGGGCCGCGGCTGGCAATTCCTGGAATGGATGGAGGTGCTTTAACTGATACGAGTCTCACAGATTCCTATTTCAGCACCAGCTTTATTGGAGTCAATGGATTTGGAAGCCCTGTGGAGACGAAGTATCCTGTGATGCAGAGAATGACCAATAGTAGCAGCTCCCCAAGCCTTCTAAATGACAGTGCCAAGCCATACGCAGGCCACGATCCTCTAACTTCACCTGCTTCATCCTTGTTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGAAGAAAGCCAAGGAAGTATCGCCTGGGGATGCTGGAGGAGAGGCTAGTTCCGATGGGATCAAAGGCACGAAAAGCAAAGAACCCTATTGGCTGCCTTGCTGACAGGTGTAAATCAGGAGTACCCATCAATATGGTTTGGTGGAACAGAGTCACAGAAAACAATTTACAGACACCAAATCCTACTGCAAGTGAGTTTATTCCCAAAGGAGGATCAACCTCCAGGCTGAGTAACACGTCCCAGTCACACGCGTCTGCCTTCTCTCAAGTGTTCTCTCACCCGTCCATGGGGACTCCTGCTGCTGCTGGATTAGCACCAGGAATGTCATTGTCTGCTGGATCCTCTCCTCTTCATTCCCCCAAGATCACTCCACATACTTCTCCTGCCCCCAGAAGAAGAAGCCACACTCCAAATCCAGCAAATTATATGGTGCCTTCTAGTGCCTCTACGCCCGGGAATAATTCTGTTTCTCAGACACCATCTTCTGGTCAAGTGATCCAAAAGGAAACCGTTGGTGGGACGACGTACTTTTATACAGACACGACTCCAGCACCTTTGAGTGGAATGGTATTTCCTAACTACCACATCTATCCTCCAACTGCACCTCACGTTGCTTATATGCAGCCAAAAGCGAATGCACCTTCCTTCTTCATGGCTGATGAACTGCGACAGGAGCTGATAAACAGACATTTAATAACAATGGCTCAAATTGATCAAGCTGATATGCCAGCAGTCCCAACAGAAGTTGACAGCTACCATAGCCTGTTTCCTCTAGAACCACTGCCACCACCCAACCGGATACAGAAATCAAGTAATTTTGGATACATTACATCCTGCTACAAAGCTGTAAATAGCAAAGATGATCTGCCTTATTGCCTTCGGAGGATACATGGTTTCCGTCTTGTTAACACAAAGTGCATGGTATTAGTCGATATGTGGAAAAAAATTCAGCACTCAAATATTGTAACCTTGCGTGAAGTGTTTACCACTAAAGCTTTCTCAGAGCCTTCTCTTGTGTTTGCATATGATTTCCATGCTGGAGGAGAGACCATGATGAGCAGACACTTCAATGACCCCAACGCGGATGCCTATTTCACAAAGAGAAAGTGGGGTCAACATGATGGCCCATTGCCCAGACAGCATGCTGGATTGTTGCCAGAATCTCTTATTTGGGCATATATTGTCCAGCTGAGTTCTGCACTGCGTACCATTCATACAGCAGGTTTGGCATGTCGCGTTATGGACCCAACAAAGATTCTGATAACTGGCAAAACAAGGTTGCGAGTAAATTGTGTTGGAGTTTTTGATGTTTTAACATTTGATAACAGTCAGAATAATAATCCATTGGCATTAATGGCTCAATACCAGCAAGCAGATCTGATATCATTAGGAAAAGTTGTGTTGGCTTTGGCTTGCAACTCTTTGGCAGGAATTCAGCGAGAGAATTTACAGAAAGCCATGGAACTGGTGACAATCAACTACTCCTCTGACCTGAAGAATCTGATTTTATATTTGTTGACTGACCAAAACAGGATGCGAAGTGTAAATGACATCATGCCCATGATTGGTGCTCGATTTTATACTCAATTGGATGCTGCTCAAATGAGAAATGATGTCATAGAGGAAGACCTTGCAAAGGAGGTTCAAAATGGAAGACTGTTTAGGCTTCTAGCAAAATTGGGAACAATCAATGAGAGGCCGGAGTTTCAGAAGGATCCTACCTGGTCGGAGACGGGAGACCGGTACCTGTTGAAGCTCTTTAGGGATCATCTTTTTCATCAGGTGACAGAAGCGGGTGCTCCTTGGATTGACCTCAGTCATATCATTTCTTGTCTTAACAAGTTAGATGCTGGTGTGCCAGAAAAAATAAGCCTCATTTCCAGAGACGAGAAGAGTGTACTTGTGGTGACTTACAGTGACTTAAAGCGATGCTTTGAAAATACTTTTCAAGAACTGATTGCAGCTGCGAATGGTCAGTTGTAGTATTTGCTTAAAAAAAAAAAAAATAGGCGGGATATGGCCAAGGAGCTTAACCAATAGCAAATTGCACTACAGCTGAACTGTTGTCAGCGTCTCATCTCACGTTGGGGAAGCACGCAGAAGATGAGCAGAGCTGCTTGCACTTGGGTCAGGTGCGCTGTTACTTGAAAGAAAGAATGTCTCCCTCAGCCCCGAGCTGTGGCTGCCGGCGGGGCCACACCTGTGAAGAATTTATTTTAGATCAAGGAGCACCATTAGGTGAATGATGTTCCAGCTTTTGTTTTTTTTCCCCACTTGTATATGCACTAATTTTAATTTTTTAAAGACTTTTTTCTGATCTTTGAACTTTTGCCATGTTGTATACTTATTAAGGGAAACTATTTGCAAGGACACTTTTGGGAAACCATGCTGGGCAACATTTTTGTTCACTGAGGGGTGCAGAATTTGCTCTTTTGGGGAGGGGTTGCCCTGAATAACATAACGGACCAGGTCAGTGATTTCATGGAAGTACAGTATAGTGCATAGTTCTTGTAAGAGTATTGTATGCAAGCTCTGTATGCCATCCACTGTTTGTTCAGATTGAGAGTTTTTTGGTGTGTTTTGTTTTGTTTTTAAGAACACAGAAAAATATCAGTGAATTATTGGGCATGAATTCCCCTCTCAGCTGATTTAAATCCTTTCTGAATGAGGATAGACAGACACTGAAGGAGCATATAGAACTCTTCGCTCCAGATTAAACCAGAGCCTTTAAAAAAAAAAAAAGTGTTCCCCTGCTAATCAGATACATTTATGCCATTTTTTTTAAATAGAAAAAGAACATTAAGAAATTGTGTTAAAGGCCTGAAGGTCAGGAGTCTGTTGCTTTAGGTTCTTTCCAGTTTGCTTTTTTTTGTATAAAGTTCTGTTCTTTGAACCACAGCTTTACTATGGTACTTTACACTGGACACAGATGCAGAGACACTGTTCAGAAGACAAACTGCGCACAGCAGTGGTCTGGCGTCGAGAGCTTTCTGAAGTCTTACAGCCTGGATCTGGAAGGATCACAGTCTGCTGTGCCTTTGCAGTCACTGCTTAGCCCAAAGTCATAGTGCTTTTGATAATAATAACTTTGTGGGGTATTCCTGAGTCAGTCAATCTCAAAAGTTTGGAATTATCCTCCTCTTAACTTTCTTAACATTTGGACGTGCAGTTGTCGCCAAACTTGGGTATTCATGGAATTTCTAGTCAATGAAATACCTGTACTTAGATACTGAAGACTGCCAAATACATAGGAATTTTCTTTCATAAAAACCAGTAATGAAGACTCTTATCTCCTTTCCCAGCACTGAATGTTTTACTAGCACTGGGTGCTCACCACACAACGATGAAGAAATGTGGAAACTCAGAAGGTCGGGAGGGACTTCAGGCACTTGCAACTGATGTGACAGTCTTCAATTTTAATAACTATTCCTATTTGTAGTTTTCAGAGAAGTTTTTAATATTTCTCTGTCCACTTTTTATAAGCTTTAAAATGATTTTCTCTGCCTTGAGATTTGCATCAAGAAAAAGCACCTCTTCACCCAAAAGCTTTGAAGACTAGAGACATGCTTTACATGTTTTAACAAGTGTGTTTGAGTCCACGTTTGGTAGCATCAGTTGTTGAGTTAAAAAGGAAATCAATTATTGCATTTGATCAGGATGGATTTTAAAAAGAACATAATGTTCACTATTCAAAGGATAATTAACATTTGCCACCATAATGTTCTTTTTTTATGTAAAAGGAACAAGAACTTGGAAACATTAACATGCAAAGGTCTTTTATCATTATTAGCTCATGTATTTGAGGAAGAGCAGCTGTCTTTTTATATGTTTTTTGACAAATCATATTGTAATTCTTTTGTACAAAAAAGAACTACTTGTATTCTAGAAGAAATATGAAATGCTTAATTTATAAGCGGGCTGGAGATTTTTTCCAATATTGTTTTCTTTGAAAATGAAAGGGGATCATCTATTTTAGTTTCGGGGTCTGGGAACTTTTTGAAAATTTAATTTGTGGACCAATGTTATGTGAAAGCTAAGGAAGGGCAGGGGTAAAATAGGGCTTGATTTTCTCATTCTGTACAGACCAGCAAACTTCCCTCTGCAAGGCAGGCTCAAATCACACACCCAAGAGTGTTGGCGTCATAAAACGCTAGTTTGCTTCAGCCCCTAGTAACCTCAGGACTTGGTTTGAATATAAAAGGTAGACAACTGATATGTTTTCACGAGTAAAATATTGTCAGCCAGAAACAGCTGGTGTCAGGTAAACTTTTTTTTTTTTTTAAGCTTTGTTTTATATTTATTTTTCATTTAGTTTTTATTGGGAATGGTTTTCAATAGCACTCTTATTAGTTCTGCTTAGGTGTTTTTTGGGGGAGCCCTCTTTTCCATAGTGTAATTCCACTTAAGAGGTTGTCTAAAAGTTAGTCTTTTTAATTCATAGGAAGATTTTAATATCTGAGAGTACTCAAATTAAGGATGTAAACTTCCCACACCTTCCTGTTATGACAGATATAAAAGCACAGAAAGGACAACCCTTGAAATCATGTAACATTGGTCATTTCAGCTTTTTGTACCTATTTTAAATTCTGTCAGTGCGTTTACTTCATTGTAAATATTTTTGAGGGCACCTTTGTGTTTTTGCCTTCAACCTTGGTTCTGTGATTTGGATGTCAGCAACTTCCCTGAAAAGCACCAATGTGTTAAGTTCTAATGTCATGACCCTGGTCTGGGTTATTTCATCTTTAATCCTGTTTTCAGTCTCTATGTGTACAGCAGTATTTTTAATAAAGAATTACAGAGAGAAGA EMBV3_40160 GAGGGCACCTACCGGCCCAGCAGTGAGGAGCAGTTCTCCCACGCAGCTGAGGCCCGGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27130 AGTGATAATGGATTGTTTCTTGGACCCAGGACTGTGTTCTGGCCCTGACCCCCATCACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41831 TTGCAAAGCATCAAGTCTGTGAAAGAACCCGTCACCAAGAGACAAAGACGGCCCAGCCCC Gene BVT0102_255273 + 0 NULL GK000020.2:71299687-71302632 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115306 1 XLOC_069511 Coding TCONS_00115306 XLOC_069511 Coding Coding SLC6A19 20:71301124-71318130 = TSS85800 4331 1 TCONS_00115306_6 898 19 0.74642752131726 0 0 0 0 0 0 0 0 0 0 5.28558936548263e-07 0 0 1.0861265857181e-06 1.22654558977079e-05 0.000243930506637726 0 0 0 3.32091810007597e-06 0 0.000500307826604391 0.000347390130382068 5.41916990677794e-05 0 0 1.35284001850556e-06 1.77422280268897e-05 2.01761352442847e-05 0 XM_002696466.3 SLC6A19 PREDICTED: Bos taurus solute carrier family 6 (neutral amino acid transporter), member 19 (SLC6A19), mRNA. 0.0 6502 100.00 0.832140383283306 NM_001003841.2 SLC6A19 Homo sapiens solute carrier family 6 (neutral amino acid transporter), member 19 (SLC6A19), mRNA. 0.0 1898 86.62 0.365273608866313 TCONS_00115306_6 sp|Q9D687|S6A19_MOUSE S6A19_MOUSE Sodium-dependent neutral amino acid transporter B(0)AT1; 0.0 936 86.87 0.575723830734967 1 coding 0 0 0 0 -0.00717932879255283 0.952447478541619 0.0409005415081418 0.53872973438458 ATGGTGAGGCTGGCGCTGCCCAACCCTGGCCTGGAGGCCCGGATCCCGTCGCTGGGCGAGCTGGAGCGCGTGGAGCGGGAGGAGAGCAGCTCGCGGCCCACGTGGGACAACAAGGCGCAGTACATGCTGACCTGCGTGGGCTTCTGCGTGGGCCTGGGCAACGTGTGGCGCTTCCCACATGTGTGTGAATCCATGTGTACGTGCACGGCCAGCGGCACTTTCTCCTACCCGTGGACTGGCCTCAGTCCCCACGCCAGGAAGCCGCAGGGCCACTGGCCGCCCACCTGGGGCTCCAGGCACAAGCTTCTTCCAGGGCCGGTGCTGTGTGGGGCGGGGGGCAGTGTACCGAGGGTCAGCAGATGCCCTGGAGGGCCGCGGGCCCCTCTTCCACTTCCCCGAAGCGCAGGGGAGGACCGCCACCTGCCCTCGCCCGTGGCCTCCCTGGCACCCCCGCTCCACCTCCGTTGGCCCGTCCGCGTCCGCCTCCGCCTCGCCTCCGGGGCAAACCTGCCTTTAGGGGCCAGCTCCTTCAGCCTCACAGGCCCGGCTGCCTGCCCGGTGCAGACCCCGGGGGAGCGCAGACGCCGGGGAGCACGGGAGGGCGGCCAGGATGGTCTCCTGGGCGTGGAGGGCGGGCCACTGGGCTCCCAGCCCATGAGCTGGCTCAGAGGACAGTGGACAGGCCTCCTGAGGGATGGGGGTACCGGGGGCGGGGTCCTGACCCACATGGGGGCTGCGGCGATCCCCTCCCCCAAGCTGGGGGGCCGTGTGCAGCCAGCAGCATCCTCCCAGGCCTCCCAGTCAGGGGGCCAGCGATGGGCCTTCACCCACCAGCAGGGTCAGCCCGGAACAGCCGCCATGTCCCACGAGCAGGGGAGCAGCCAGGCCCTCCTCCTGGTGCCCGAGTCAGGGACCCTCCACCAGGATGGCCCCCGAGGAGTTGTGACAGAGGGGGTCAAGAGCCCCCAGAGCCACGAGCATCCCCAGGCCTCCTCCCTGCGTCCAGCTCTCCGGGCCGGCGCGGGGCCAGAGGAGACCATGGTAACCCGGGATGCGCGGGGCCGGGCACCGGTGCCCGAGGAGGCCACGGAGGATGTCTCTGCCGGCCGTGCTCCGGGCGGGGCCCCACCCGCGGGCATCGCGTCCATGTTCGTGTCCTTCATGGTGGGCCTCTATTACAACACCATCATCGCCTGGGTCATGTGGTACTTCTTCAACTCCTTCCAGGAGCCCCTGCCCTGGAGCCAGTGTCCGCTCAATGCCAACCAGACAGGTTACGTGGACGAGTGTGCCCGCAGCTCCTCTGTGGACTACTTCTGGTACCGCGAGACCCTCAACGTCTCCACCTCCATCGATGACTCGGGCTCCGTGCAGTGGTGGATCCTGCTGGCCCTGACATGCGCCTGGAGCGTGCTCTACGTGTGCACCATCCGGGGCATCGAGACCACAGGGAAGGCCGTGTACATCACATCCACGCTGCCCTACGTCGTCCTGACCATCTTTCTCATCCGGGGCCTGACGCTGAAGGGAGCCACCAACGGCATCGTCTTCCTTTTCACGCCCAACGTTACGGAGCTGGCCAACCCGGTCACCTGGCTGGACGCGGGGGCCCAAGTCTTCTACTCCTTCTCCCTGGCCTTCGGGGGCCTCATTTCCTTCTCCAGCTACAACCCTGTCCACAACAACTGCGAGATGGACTCGGTCATCGTGTCTGTGATCAACGGCTTCACGTCCGTGTATGCGGCCACCGTGGTCTACTCCATCATTGGCTTCCGCGCCACCGAACGTTACGACGACTGCTTCAGCACGAACATCCTGACGCTTATCAACGGGTTCGACCTGCCCGAAGGCAACGTGACACAGGAGAACTTTGCTGAGATGCAGCGGTGGTGCAACGCCTCCGACCCCGCGGCCTACGCCAGGCTCAAGTTCCAGACCTGCGACATGGACGCCTTCCTCTCACAGGGCGTGGAGGGCACCGGGCTGGCCTTCATCGTCTTCACCGAGGCCATCACCAAGATGCCGGTGGCGCCCCTCTGGTCCGTCCTCTTCTTCGTCATGCTCTTCTGCCTGGGCCTGTCGTCCATGTTCGGCAACATGGAGGGTGTGGTGGTGCCCCTGCAGGACCTCAAAGTCATCCCCAAGAAGTGGCCCAAGGAGCTGCTTACAGGCCTCATCTGCTTGGGGATGTACCTCATCGCCTTCATTTTCACACTGAACTCCGGCCAGTACTGGCTGTCTCTCCTGGACAGCTACGCGGGCTCCATCCCCCTGCTCGTCATCGCCTTCTTCGAGATGTTCTCCGTCGTCTATGTGTACGGCGTGGACAGGTTCAACAGGGACATTGAGTTCATGATCGGCCACAAGCCCAACATCTTCTGGCAGGTCACGTGGAGAGTGGTGAGCCCCCTGCTTATGCTGGCCATCTTCCTGTTCTTCTTCGTGATCGAGGTCAGGGAGGAGCTGACATACAACATTTGGGACCCAGCCTATGAGGAATTTCCCAAATCCAAGGAAATCAAGTACCCAGGCTGGGTGTACGCTGTGGTGGTCCTGGTTGCTGGGGTCCCCTGCCTGGTCATCCCTGGCTTCGCCATCTACAAGCTCATCAGGAACCACTTCCAGAGGCGAGGGGACCAGCGGGCGCTCGTCAGCTCACTGTCCGCGGCCTCAGTGAACGGCGGCCTGTGGTCCTAGGCAGCCCAGCCCGTGGGGTGGGGGTGGTGTCTGAGGAGGGAGTGGGCTGCACGTGTGTGCACGTGTGTGTATTATGTGAGGGTGCATGTGTGGGAGCGTGTATACATGGGCGTGTGTGTGTGTGTTGTTCATGTGAGTGTGCAAGTGTGAGAGGGTATCTACCGTGTGTGGGTATGTCCCTGTGTGTGTATGTGTGCATATGTGAGTGTATATACATGTGCAAGTGTATGTGTACACGTGTGGATGTGTGTAAGCATGGGTGCATAACAAGGGACATGCTCCTGGTGTGGTTACACACACGTGTGTGTGCACATGGATGTGTGTGTGCATGTGAGCACGTGTGGGCAGGTGTATACGTGAGCCAGTATGGGAGTGTATTTGCACGCGTGTGAGTGTGTTTCAGTGTGCATGCATCTACGTGTTGTGCATGTGTGCTCATGCTTGTGTGTGTGTGCACAGCTGTGTGTGTACCTGTGTGTGCGTGCATGCCTGTGGCTTTGCTTGCACACACACGTGTTGCCTTGCAGCAACCCGAGGGCCTGGGAGCTGAGGGCGGCCCACCTCCACCCACTCCCAGAGAGTGAGCTGCCGTGGGGCGGGGCCAGCTGCGCGCGCCCCACTCATCTCGGCCCCTGGGAGCCAGTCTTGGTGCCTCTGCCCTTTCCTCTCGAGGTCCCCTCCGACCTCGGGATTCTTGCGGTGAGGTCGGGGCTTTCACCCTGTGACCAGGAGCAGCCTTCTCAGGCCCGTCCAGAAGAGGCCAGTGAGCTCGACAGAACTTGGCCGGCCCGGTGGGGCCCCACCCATCCGACAGAGTCTTGGCCACACCCGGGTGTGATCTGAAGGCTGATCTGCTTAATCCCTGCATGTGGCTGCCAGCAATAGATGAGCAGTTAAATAAAACTCAGCTCGGGTGACTTAAGGCAGACCCCCCCACACTTGGTACGTTCTTGAGAGGACATTAACTGCATGAATATTTAGCCAGATGTTGGAGAAGACGGGTTGTAGGATAACTCGGCCTTGGCCACCGAGGTGGAGGACTGCCCGTGCGTCCCGAGCGACGTCAGGGACCGTGAGGGCAGGGGGACTGTCCAGCTGTTGCTGCTCAGTGACGCCGGCGTCGGCGCGGGGACGGGATGCCACATCCAGCCTCCTCCAAAGTCACGTGAACTTGGGTGTTTGTTTCCAAGAACCATCACCCCCACTTTCCAGGCAAGAGTCTGCAGGTTTATGTTGAACTGGACTTTGCAAGGATTCTCCGTGCAGGACCAGGGGCCCGAGTGGTGGGTGGGAGACTCCTGACCAGCATCCTTGGCATCCAGCTCCTCTACTCCCAGAGCTGTCCGACCCTGTTGGGAAAACTGCTCAGGACCCCTTAGATACACCCCGCCCCAGCCCACCCCCAGGGTATGTGGAGGGGAGACACACTCCCAGACGTGACCTGGGCAGGGACCCCACCCCCAGGGTGCGTGGAGGGGAGACACACTCCCAGACGTGACCTGGGTGGGGCTGGGCCGTCTTTGTCTCTTGGTGACGGGTTCTTTCACAGACTTGATGTTTTGCAAATTGTTAGAAATTTGGGTTTTGTGGGTGTCGTGTGTGCCTGTGTGAATAAATCACTCTTTCATAGTCTT EMBV3_03165 GTGATTTTGCTCCTTTGGTGGAACTCTCCTGTTCTGACATCAGTATCCCTGCAGCTGTCC Gene GeneID:529308|LOC529308:XM_002693113:519_cdna Constitutive 0 NULL GeneID:529308 15 GENE LOC529308 NULL similar to olfactory receptor MOR204-13 EMBV3_25146 ACTCCACTCTTCCCGAGAGTTCCTCACTCGATTCACAATGACATCCTTTCAAGAAGTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13632 TGATCACTGGGATTCATGGGAAATCCAGGGTCTGGTGGCTGAGATGAGTGAATCAGGATG Gene GeneID:515122|ABHD14A:XM_002697067:571_cdna UTR3_Alt 3 NULL GeneID:515122 22 GENE ABHD14A NULL abhydrolase domain containing 14A EMBV3_35833 GCGGGCACCTTCCTCAGTCGTGCAGTGCAGATGCCAGGATAGAAGAATTTGTTTATGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24730 GCCAAGGGGACCATTATAGGGGGCAAATAGCCAAGGAAGCTGATTTTATGGTTAACGTCC Gene BVV0102_296937 + 0 NULL GK000003.2:100091281-100113665 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170915 TCONS_00170916 TCONS_00170911 TCONS_00170913 TCONS_00170917 TCONS_00170918 TCONS_00170912 TCONS_00170914 TCONS_00170904 1 XLOC_103683 Coding TCONS_00170915 XLOC_103683 Coding Coding ATPAF1 3:100065227-100092645 = TSS127588 3846 1 TCONS_00170915_3 346 0.121164846593864 9 0.860050333734544 0.00141310857701704 0.000865104960184422 0.00104447973003959 0.000451343726617917 0.00105640197323505 0.000455730781368371 0.000378956507740447 0.000884167564293321 0.000432065487541683 5.63176909571321e-05 6.78522791102835e-91 2.96556022647964e-37 4.08260279150862e-31 9.94034293074166e-05 0.000653175503292352 0.00405474594893787 0.00324352492190137 0.00431982140324806 0.000740391001902151 0.00138052433366681 0.000172812373189557 0.00227494599897658 0.000488831645868236 0.00117940130364965 0.0005423092265849 0.00165886071988217 2.93881327024535e-05 0.000478720359187302 0.0001927461505155 0.000787227427857579 XM_001252143.5 ATPAF1 PREDICTED: Bos taurus ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), transcript variant X1, mRNA. 0.0 3858 100.00 0.555902236089444 NM_022745.4 ATPAF1 Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), transcript variant 1, mRNA. 0.0 1909 83.43 0.465678627145086 TCONS_00170915_3 sp|Q5TC12|ATPF1_HUMAN ATPF1_HUMAN ATP synthase mitochondrial F1 complex assembly factor 1; 0.0 595 93.27 0.88728323699422 1 coding 0 0 0 0 -1.75346933860538 0.00462344574248504 -0.301904017073912 0.010425856337762 CAAGAGGAGACGGCGTGCAAGGGATGCTGGTCGCGGGCTCCTGGAGAAGGCGGGCGCTAAAGCTGCAGAATACGCAAGGCGGGGGCGGGGGCCCAGGCAGGAGCAGCGAATCCTCTGCCCTCTACCCGGCCTTTCCCCGGCACCCGGAACATTGAGAGCGCGGAACCTCGTTGCCGAAGCGCGGGCGCGGCGGACCCGGAGGACGATGGAGAGGGCGCGCGGGCCGCGGGCCGAGGCCCACGCGCCTGGGGAGGAGGAGGAGGTGGGAACGGCCATGGCTGCCGTGGTGGCGGCGGCGGGTGGCGCGGGCCCGGCCGTCTTGCAGGTGGCCGGCCTCTACCGCGGCCTATGCGCAGTGCGCAGCCGCGCCCTGGGCCTGGGGCTCGTGTCAGCCGCGCAGCTGCGCGTGTTCCCGGTGCGCCGCAGCTCGGGCCGGCCCGCCGGGGGAGCCGACGGCAGCGCGGTCGGGGACGAGCTCGAGGCCAACCCCTTCTACGACCGCTACCGCGACAAGATCCAGCAGTTGCGCAGGTCTGACCCAGCTGCTTTTGAGTCCAGACTGGAGAAGCGCAGTGAGTTTAGGAAGCAGCCAGTGGGGCACTCCAGGCAAGGTGACTTTATTAAATGTGTGGAACAGAAGACACTGGGGAAACAGCCTGTGAGCAGAGGATTCACTAAGGACAAGACTCTCAGTTCAATCTTTAACATTGAGATGGTGAAAGGCAAAACTGCAGAAGAAATAAAACAGATTTGGCAGCAGTATTTTGCAGCAAAAGATACAGTCTACGCAGTTATTCCTAAAGAAAAGTTTGATTTGATTTGGAACCGGGCTCAGTCCTGCCCAACATTTCTCTGTGCACTACCAAGAAGGGAAGGTTATGAGTTTTTTGTCGGGCAATGGACAGGTACTGAACTCCACTTCACTGCACTTATAAATATTCAGACCCGAGGGGAAGCTGCGGCCAGCCAGCTGATTTTATATCACTACCCTGAACTTAAGGAAGAAAAGGGCATAGTGCTGATGACAGCAGAAATGGATTCCACATTTCTGAGTGTTGCTGAGGCACAGTGCATGGCCAACCAAGTGCAGCTCTTCTATGCCACTGATCGAAAAGAGACCTACGGGTTAGTGGAGACCTTTAACTTCAGACCGAATGAGTTCAAGTATATGTCTGTCATCGCTGAGTTGGAGCAAAGCGGACTTGGAGCCGAACTGAAATGTTCTCAGAACCAGAATAAGACTTAGGGATGTCAGGTTGGCTTACAGAGTTTTCTGCTCAGCCCTGGATAGTACTGAGCCTACCCACCCCTTGAACTCTTGGAGGCTTGGTATCTATAATGAGCTGTCTCTAAGGAGTCGTCCTGTGTGCTTGTTGCAAGAAGTAACGTGGAGGTGAGCCCTGTTACTTGATATTCAGGAAGAAAGATACCCAGACATTCTGGTAACTGTCTCCCAGCGTACTTGAAGTTTCCTTTTCAAGTGTTTGAGGTCACATCCAGAGACAATCAGGGATCCACAAGATGGTTGACTTAATTATATGCACTGTAAGAGTATATTTGTTCTCTGGCCATTTTGACTGCACAGCTCCTAATAATTAATTCCTCACCTTTATAAACTGTGACGGGATAATAAGCTTGAAGACCTCCTGTAGTTAGACATGGTCTTTGCGTACTCTTCCCACTTGGCTAGCCAAAGGCATAACCCAGTTAGACCCTCGAACAACCACATATTGCCATCAGGATTAAGAGTCTGTCTAGATGCTCCCAGAATTGCTGTTAGTGTAGCTGGTTTGGAGTATCAGCAGATTTCAGGTATATTAAAAGTACAGGTACAGTGCCTGCTGCCTGCATATTTTTAAACTATAATTTGTGACACCTGCGTCTCTAACTATTCTGCCTTTTGGAAGCTGTGTATTTGGAGGGGCCGAATTGGTGCAGTATAAATAAATCAACTATTTTGTAAACAAAGGATCAATCCAGATTTGCTTTTTGTTTTTTAAACAACTCTAAACCATGCCAGTATTATATTAATAGAAAAGGTAAGTGGAAGCAAATGTACCCTATTATGTGTGTGGGAAAATGTAGCAATAAAATAAAGTCTGGCTTATAATCTTTGTTACACTAAATAATGAAGTCTAAGCTGTGTGCTGTCCATTGTGTCTGTACTGTGGGCTGATGTCATCAAAACTCACCTTGGACTCAGCAGTTGCTTAAAATAACAGGAAAAAAAAAGAAAGAAGCTCTCCAGCACTGGAAACTCAGGTTTGGCTTATAGTGTCCCTGTGTGGCTCCAAGCTCAGTGATAGAAGAGGGTGGCAGTAACACACCGGGCTTCTGAACACGAGGCCTCAGAGCACCCCCTGCCCCAGCATTGTCGTCAGCCACCTTTATTATAACGTCTTTCCTTTTCTTCATCTAACATGTTCCACTTGGCTGCTCCTGCCTATGGTCTGGTGAACAATGCTGAGCATGGTGTGTGGGAATATAACCAGGATTTGCAGTTTGTGTGTTTCATTTATTACTGGAGACTTTTTATAGGTTGAGCTCGTCCCCAAGTCCTTTAAATGGGATTGGACTTCCCATTATTTTCTGAGCTGTGTTTCTTTTGCTGTACTTCTGAATCTGTCTGTAGAAAGAGAGAGCGTTTGTTTAACCTGGAAAAATTACTGGTCTTTCACAATTTCTCTAAAGGTTGAGCTATTTCCTAATGCAGATTCAGGCCTCTTGTCCTGACATTTCTTTGTTCTTTTTTTTTTTTTGAGAAACGAGTCTGGTTGTTTTGAGTCCCAAGAATGTTTGCTGTTCAGTGGAATTACTTTCATAGATATGTTTCCTTTTCCCCTCCAGATGGCCCCAGTCTTTAGCCTTAGTACCTTTCATAACGTCTCTACCAGAGGATAAGAAAATGACGATGAAATAAGTTGGAACTGACTTCTCATTTTACATTGCTCCCAGCTTTGCCCTAAATCCCTGGTTGCCAGAGAAGAGCTGGTCCATGGCCAGTTACATCAGATGTGATCAAAGTACCATCTGGTTGTTCTTTATATTTACCTAGCAAGATCTGGCAAAGAATGACAAGAAAATTGTCAAATTAATCAATCCCCTGGTATAGTGTGGTGGTATAAACGTGGACAGGCTTTATAGTTAAGTGAATCTGGGTTCAGTATTGGGATTCGTTAGCTCTAAATGTTGAACAAATTATTTAAACTCTCTAATTCTGTTTCTGCATCTACCTCATGGGATCATTTTGAGAATTACATTAACTTATATAAAGATTGTAGTAGAGCTTAATGTCAACTCCCTTCTTCCCTACTTCACCTCTCGCTAAAGACCCACAAATTAGTATATCCAATGTGCAGATCATTCTTTATTCCAGCCTTATCTCACAGGTTCTCAAACTTTAAGTTGCAGTGGAATTACCTAGAGCACTTTAGAATGTAGACTCCCAGGTCCCAAACTCCAACCTGCTGAAGTGCTGGGAATCTCCATTTTAATATGTGCTCCAGATGATTCTGACAAAGATAATTAGCCAGTCACACTTTGAGAACCACTGCCTTATCTATTCTTCACAAAAAATCCACATTAGCCAGGTCTCTCTTTGCTGTGGACGTTAACCATAAAATCAGCTTCCTTGGCTCTTTGCCTCCTATAATGGTCCCCTTGGCATACTCTACGTTATATTTATTTATGTATGTGTCTTTTCCCCTCTAGACTGTGAGCTCCTTGAGGGCTAGGGGTTTAATCTCCATTTCCAGCACCAAGGACATGGCTTGATGGCTTGGAACATTGAAGATACTCAGATTTTTGTTAAATAAATACATGACATGGATTTTAGCCAAAACATTA EMBV3_00479 ACGACGGAGAGAGCAGAAGGCGGACACGACGGATGAAACAGAAGATGGCTGATTTCTTGA Gene GeneID:768021|MGC137055:NM_001077080:72_cdna Constitutive 0 NULL GeneID:768021 19 GENE MGC137055 NULL hypothetical protein MGC137055 EMBV3_08733 ATGCCCATAGGTAAGAGCCACATATCCAATAAGTCCCGTTTGGAGCAAGCCAGCGCGACT Gene BVV0102_021249 + 1 EMBV3_26420 GK000011.2:14236377-14305814 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00175509 TCONS_00253103 TCONS_00118459 TCONS_00210913 TCONS_00174805 TCONS_00171428 TCONS_00174806 TCONS_00232824 TCONS_00176420 TCONS_00004714 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00004712 TCONS_00174807 TCONS_00232829 11 XLOC_151107 XLOC_105290 XLOC_156044 XLOC_072622 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_142307 XLOC_106198 XLOC_001092 XLOC_142312 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_40137 ACTGGAGTGGGGTGCCATTGCCTTCTCCCAACCACCAAGGTTAGCACTTCAGAATACTAT Gene BVT0102_030803 + 1 EMBV3_04725 GK000002.2:124949962-124956593 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22280 TTCGTTACACCCTCATCATTACTAAGGTTCGCTGTGTCAAGCTGACTGCTGGGACCTGGA Gene GeneID:787559|LOC787559:XM_002689073:84_cdna Constitutive 0 NULL GeneID:787559 7 GENE LOC787559 NULL similar to olfactory receptor 290 EMBV3_19670 CAGGACCACCTGCAACATGACCACCTGGACAGCACCCACGAGACCAGCAAGTACCTGAGT Gene GeneID:513105|CREB3L1:XM_002693532:137_cdna Constitutive 0 NULL GeneID:513105 15 GENE CREB3L1 NULL cAMP responsive element binding protein 3-like 1 EMBV3_01041 CCATAAAGGCACAGGTCTTTGTTTACTGCTGTATCCCCAGAGTCTAGAACATTGTTGAGC Gene BVV0101_005343 + 1 EMBV3_16069 GK000021.2:68911836-69009822 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30949 CTGTGTGTGGGGAACTGAAGTTTCGGGGTAGGACAGGCCCTCATCTGTCTTCCTTTAAGT Gene BVT0101_049870 + 0 NULL GJ059348.1:1-3220 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05006 TTCCACTTTCCGGGTGTGGCCGCGAGTCGGCACAGCATTCTGAAATTTTTTGGTCATTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36219 CACGTGGACAGGCCCATTCTTCGCATCCCGCATCCCCAAGTCCTACATGATCAGCGCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23264 ATACTGTCGGATTGTGCTTCTCTTCAGAAAGGTGTGTGCTGTTTGACCGTACTGGAAATG Gene GeneID:505824|NTRK2:NM_001075225:2_cdna Constitutive 0 NULL GeneID:505824 8 GENE NTRK2 MGC140769 Trk-B neurotrophic tyrosine kinase, receptor, type 2 EMBV3_15905 CTATCCTGGAGAAGGTTCCATGTGCGCCTGAGAAAAAGGTGAAATTCATTGTTTGGGGTG Gene BVT0102_214963 + 0 NULL GK000001.2:47007063-47061638 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33869 CGTGAGGTAGAGGACAGTTTTGTGTGTCATGTAATGCAACCAACCACAGCAATTTTACCC Gene BVT0102_039645 - 1 EMBV3_16413 GK000001.2:97802993-97823538 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004634 TCONS_00004638 TCONS_00004637 TCONS_00004635 TCONS_00004632 TCONS_00004636 TCONS_00004633 TCONS_00004639 1 XLOC_001078 Coding TCONS_00004639 XLOC_001078 Coding Coding SKIL 1:97819965-97846196 j TSS2312 7530 1 TCONS_00004639_5 684 0.0163346613545817 7 0.7131910026687 9.90418897927045e-06 8.70602115352298e-13 2.38826493643501e-07 2.79842802574925e-13 4.46581794670945e-11 0 1.85575515030829e-12 2.31084024116609e-10 1.13330244477542e-35 4.02523229303359e-05 6.17219573648042e-05 6.24280208108416e-08 1.05321519433307e-11 5.26972772480542e-10 1.03271392690156e-05 0.00116923863063154 0.000437981020834198 0.000247194789532274 3.30722933610378e-10 1.07252344115313e-05 4.9449248348374e-06 0.000179886721268224 0.00047750608781701 0.000660874012195536 7.24596889625856e-11 2.70931938671474e-10 3.49548476549422e-11 1.69285742073274e-07 7.22031057205396e-05 6.10933899179247e-05 XM_005201684.1 SKIL PREDICTED: Bos taurus SKI-like oncogene (SKIL), transcript variant 0.0 1.257e+04 100.00 0.925763612217795 NM_005414.4 SKIL Homo sapiens SKI-like oncogene (SKIL), transcript variant 1, mRNA. 0.0 4801 83.47 0.598406374501992 TCONS_00004639_5 sp|P12757|SKIL_HUMAN SKIL_HUMAN Ski-like protein; 0.0 1282 90.95 0.998538011695906 2 coding 0 0 1 0 -0.0361049321680902 0.81824315710862 0.00670310259258772 0.895244595906288 CTGGCTCAGTTCTCCTCTCCTCCCCTCCCCCCACTGCCGCCCTCGCTCTCCCCCGGGCGGCCGGAGACGGCGGCGGCGTCTGCGGGAAGCCGTGTGTCTCCGCAGTGACGTGGGCGGGCCGAGGGCTCGGTGACGTCAGAGGGCTGTGTGTAGCGATGTGTGTGGGGTTCGGAGCGGCGCCGGCACAGCCAAGGGGAGCGGGCGAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGCACAGATTAATTAAAAGAAGAATGAACAGTAATCCTTGAAGATAACTGGGCAGATTTTTCTTTAGGTTTCATTTTTAATACAGAAGTTCAAGTGGAGTCAGAGTCTCTTGTTACTAGTGTGAGGGTTTATTCAAGCCTTCATTTTGTTCACACAGACCAACAGATCATCATTTTTAGAGAAGATATCCACCCCTCCCCCCCCTTTTTTGGTATCCTTGGTGCCAAATACTAAATTTGGGTGCATAATTTTGACACAAGTGATTTTTGACACAAGCATAAACTTTTTGGGTGTTGTGCCTAAAACTAAACCAAACTGTTGCACTGAGCATGGACATCTTGAATTGAGAGAACTGGTAACTTGATTTTAGTACATATACCTGAACATTAAAAAAAACAAAAAGGTTTCCTTGGAGGTGTGCCTCTTAAAATTATTTTCTTTGTTATTAGACATAATTTTTTTTATAGCACTGGCAGTACTTATACTGAAGTATTAGCAGAACCAAAGTTGCAAAATCTATTGAGTAGTGTAGGGATCTCTCTATGGAAATTTAAATTTTCTTTGAGAATAAGTTACCATAAGTATTGGTATTCATCAATTCTCTCTCTTAAAATAAGCAACTAAATAATAATGCAAATTTCAGACTTACTTGTTTAACACAATAGTTTTTAGCAATGGAAAACCTACAGACGAATTTTTCCTTGGTTCAGAGCTTAAATAAAAAATTGAATGGGATGGAAGATGATGGCAGCCCTCCAGTGAAAAAGATGATGACAGACATTCATGCAAATGGAAAAATGATGATAAACAAGTTGCCAGCAGTAAAGAAGGAACACTTGGATGATTATGAAACACCAATGGAAACCGACGAAGAGCATGTCAAGAGGACCTGCGCCTCTGTGCCTGAACCTTTACATTTAAATCCCAGTTTGAAACATACTTTGGCACAATTCCATTTAAGTAGTCAGAGTTCTTTGGGTGGACCAGCAGCGTTTTCTGCTCGGTATTCCCAAGAAAGTATGTCACCTACGGTATTTCTGCCTCTTCCATCTCCTCAGATTCTTCCTGGTCCACTGCTCATCCCTTCTGATAGCTCCACAGAACTCACCCAGACTCTGTTGGAAGGGGAGTCTATTTCTTGTTTTCAGGTTGGAGGAGAAAAGAGACTCTGTTTGCCCCAAGTCCTAAATTCTGTTCTCCGAGAATTTTCACTCCAACAAATAAATACAGTGTGTGATGAATTGTACATCTATTGCTCAAGATGTACATCAGACCAGCTTCATATCTTAAAGGTCCTGGGAATACTTCCATTCAATGCCCCATCCTGTGGGCTGATCACATTAACCGATGCACAAAGACTATGTAACGCTTTATTGCGGCCGCGCACCTTTCCTCAAAATGGTAGTATACTACCTGCAAAAAACTCATTGGCCCAGCTGAAGGAAACTGGCAGTGCCTTTGAAGTGGAACATGAATGCTTGGGCAAATGTCAGGGTTTATTTGCACCCCAATTTTATGTTCAGCCAGATGCTCCATGTATTCAGTGTCTGGAGTGCTGTGGAATGTTTGCACCCCAGACGTTTGTGATGCATTCTCACAGATCACCGGACAAAAGGACTTGCCACTGGGGCTTTGAATCAGCCAAATGGCATTGCTATCTTCATGTGAACCAAAAATACTTGGGGACACCTGAAGAAAAGAAACTGAAGATAATTTTAGAAGAAATGAAGGAGAAATTTAGCATGAGGAATGGGAAGAGGACTCAATCCAAGATAGATACACCACCAGGAATGGAATTGCAGTCATGGTATCCAGTTATAAAACAGGAAGGTGATCATGTCTCTCAGACACATTCATTTTTACATCCCAGCTACTACTTATACATGTGTGATAAAGTGGTTGCACCAAACGTGTCACTTACTTCAGCTGTACCCCAGCCTAAAGAGGTCACAAAGACAGAGGCAAGCAAATCTATACCAAGACAGTCAGAGAAGCCTCACAGTAGTGGGAAACATCAAAAAATAGTGTCTTATCCAGATGTCTCACTGGAGGAACAGGAGAAAATGGATCTAAAAGCAAGTAAAGAATTATATAGCCACTTAGATCCATCAGTCTCGAATAATGCTACCAGCAAAAAGAAACCTGAGTCTACCACTTGCAGCTTAGCCAGAGACACAAGCAAGTCAGGAACTGACTGTGATGTTGCAGCTTCATCTCCACTTCTTGTCAAAGACGTCACTTGTGAGGACGATAAGGGAAAAATCATGGAAGAAGTAGTGAGAACTTATGTAAAACAACAGGAAAAATTGAACTCAATTTTACAGAAGAAGCAACAACTTCAGATGGAAGTTGAAATGTTGAGTAGTTCAAAAGCTATGAAGGAACTTACTGAAGAACAGCAGAATTTACAGAAAGAGCTTGAATCTTTGCAGAATGAACATGCTCAAAGAATGGAAGAATTTTATGTTGAACAGAAAGACTTAGAGAAAAAACTAGAGCAGGTAATGAAGCAAAAATGTACCTGTGACTCAAATTTAGAAAAAGATAAAGAGGCTGAATATGCAGCACAGCTGGCAGAACTGAGACAGAGACTGGACCATGCTGAGGCTGATAGGCAAGAGCTCCAAGACGAACTCAGACAGGAACGGGAGGCAAGACAGAAGTTAGAGATGATGATAAAAGAGCTAAAGCTGCAAATTTTGAAATCATCAAAGACTGCTAAAGAATAGAAACCTTCAAAGAAATCCATCTGTGTGTTCCCAACAGGGTTTATTTTTATTTGTTTACTTTGGTAAATGAATTCTGAACAATTTAGCTGCATGAAATAACTAGGCATTCTATCCATTTGTAGATCAGAGAAAGTGAAGAGATTATATATTAGTATATAAATTTTTACATTTTCCAAAAGAATGAAAATGTATGTTTCTTTGTACTTTTCTTTTCAACCAGCTTCAAACCAATACTTTGCAATTTCAACTATTAGATATGATGCCTATATTTCTAATGCAGTTTAACAATTGCATACTTTTTAAAAGCTGCATTGTGTGATGGAAAATAGTTTTGATCAATTTTGTTATCCATATTTTAGACTCAATTTTAGATACAATGATGGCTTCATATTTCATATATAGAGCTACTCAAGGAGTTGTCCATTTTTTTCATTAACTCAATCTCCTTTCTAAGTTGAAAGTATACTCATTATTATAATCAAAATTTTTTTTGTTTCGTCTTGTGGCATGAATTTCCATCAGTTCCTTTCTATTTAATGTCTCCTAAGAGACATTTTGTCAGTAGAGGAATTTCATTGATGAGGTTATAGCACACCCCAAGGGAAAAGATAACATGCTTTCTTATATACTGCTGCTAAACTCAAGAAGCAGTTATAATTAGATTTTCTGTTTAAATGTGGTTATATTTAGAGAAAATTTTTTATGCAGCAACTTTAGAAGAGGGAATAAAATGTCGTAATTTTTGAACTTTTGTTTATGTTGTTAATAGTGTTGTGAAAATATTAATGTACTTGAGAAAAACTGATCCCATTGATGTACATCGGTTTCTATACAATCCATAATCCTCCTGTACAGTTTTTTATGTAGTTGTGGGTCGTACTGAAATTTATATAATGGATTTGTTTTCCTTTAAATTGTAAGATATTAAACACTTTGAAGGTTATTTTGGACTTTTGTATGTTTAAATGTTAAGTCTTACCAAATGTGCATGAATGGACCATTTTCAATTATTATTTAATATCAAAATCAGGAATTTACAGTCAACTAGTAGTGTATGATAGGTTAATATAGGGAAGTTTACTTATCTGCTACTAAGAGATTTTTAGATAGTTTTTAGAAGACAGAAATTCCATAGTTTGGGGAGGGACAACTTCTTTCTGCACTTTTTTTTTTTTTTTGCACAGAAAAGTCTATCATTAATGGCAAATTTCATGTTAGTTAATTCTTGGCTTAAAAGATACTAGGTAAAATTCTTAGTATGCATTTTTTAAAAGAAAGTTTCCTGAAGCTACCATTAATTGACATTGTTATCTCATGAATTTAATTTTTATATTCTTGTGTATGGTACTATATGAAATTACTTGAGAGCTAAATTTATTTTATAAATAAATCAGCTAAAGTTGAGGTTATTTACTCTTCCCATAATAGACAATAGATGCTTGGTATAGAACTTCAAAAGTAAGTAGGTTATCATTTAACCAGTTATTTTCATATTTTGCTTAATGGTACTTACATAGCCTAAAAGAATTTTTGTACTTCCCAAAGTATAGTTTCTTTACTAGAATATCATCTAAATGTGTATTTTCTATTTTCCATTTAAGTTTTACTGTGTTAACCCTGCAGTTTAATTGGTTGATCCTTGGAATCTCCTTAAGGAAGAACACATGTTAAAATGACATACAGGAATAAATATTAAAAATGACATATGCTTCTAATACTTTTTATTTGCCTTTATCTGGAGAAAGAAAAACACAAAGAAATTTATGACACAGTTTCGTTTTAGTTGTGGATTAGTTGCATCACAGCTAAGGTTTTTGGGAGGTAAAACTCAAGCCTGTATAATTTATTTTTCTATTTCACTCAAAATCTACTTATGTTACTTAGTTAAAATGATAAGCTATTGAAGTTTCAAGTCAAAACATCTAAAATAATTTGTTTAATCATTAAAATATGTTTTTAAAAATTCTAAGCAATGCTTAATCACCTTTAAATTGTCATAAGCTCTTAATTTATTAGCTTTGAATAAAGAACTATTTTTTCTAGTCCTTCACATAAGGGAAACTTGCCACATGAAATTGTATAGTCTTCATTTTTCAGAAGATACATTAATGTGCCATCAGTTTCTAACTTCTTTGAAAATAGTGTTTTTTTTTTAAGCCAATTGTAAATAGTATGCCTATTCTAGATAAAAGTAATTTTAAGTTAAACTGTACAACATAGCTTGAAAGTATAGAGACTTTGTAATACTTTACAAGTGGCCTCTGCTAAAAATATCTTATCCATATAATTATTCTTCTATTCTTTGCATGCCCATTTTGTGTGTTGGTTGTTAGCTTAAAGTTTGTTTTAATGTTAACTTTTGGGTGCCAGCTCATCAGGCAAGAATATTTTCCCTCAGACGTCATAATATTTTTCTTTTTAGGAAAAATATAAAAATACTTTCAAAAGCTGTGTTAAAGGAATGACATATCACAAGTGCTAGAGCATCTTTAAAAGGAAGAAAAGATAGAATATTAGTTGACTGGGTGATGAATGATGTTAAATTTGAATAATGATAGTTTCTGTATTCTAAACTTGATGAGAAAAAGGTACCAAGTCTATTGTAAAACCTGCTGTCATTGAGGAAGCTCTGAACAACCCTGGTTTCACAAATAACACTTTGAAAGAATTTGACCAATAATGTAAGTTTGGCTTGTGCTTTAGTTTTGTAAGGCATACTTTTTTGCTTCAATTTCTGTGTCCAGGAGAGTTTGGATGTTTAATGGTTCTTGAGCTAATTTTATAATATATTTAATATATTACCAGTTGAGATATATAAAATTTGTACATATTGAATTAAAAACCAGTTGCTAAAGTAGGTGTAATAGACTGAGTACAGTGATACCTGCAGGTTGGTTACCCATATGTTCTAGAAGTCATGACAGAACAACCAATTCATTTACACATCTTTGGTTTCTGTTTGAAGGAAAGTAAAATGATAAACTTGAGCAATATAATACATGCTCAAAGTTATTTCCCTATATGAGTAGTAAAGCTGGTGCTGAAGATTTTTGATCAGTTTCTAAAATTTTCTACTCAATGACTTACGTTTTGATTGCTTAGGAAAAAATCCTTACTTTTATTTGCTCTTATGCATTTAATCCACACGACAGCATATTACAGATTAATAGAATGAAAAGTTGTGCTCATACTGTACATTTATTTCTGTGCTTAAAACTACTTGTTAGTTTTTATTGAAGCTGCCAGCAATAAGGGACACATTACTGCTGTATTATACATTGTGAGATTGAATAAACAGCTTAAATTTTTTTCCTGGCGTAAGACACTTAAGCATTTCCATTATTGGAAGGAATTTGTATGGGTATTCTATATTTCATCTTGTTTAAAAGGACAGTCTTCTTTTTTTTTTGTAAAATCCATTTTAAACTACATAATGCAATTTGGAGCCTGTTTTTTTTTAGTGATAGTAGTAAATGTTTTATATAGTGCTACTGTGTTTGAATTAAAGAGAACAAATGTAAAAACTGAAATTAAAAAATTAGGCCTAGAAAACAAAATAGTGTATTAAGTTAGTTGAATGTAAAAGAAATTTATAAGATTTTTTTCCTATAGATACCTCACTTGAAAATAAAGCACAGCATACTTAAAGTAGTTATAGTTTAAAAAAAAAATCCTACTAAAAGAATTACTAAATCTTGAACAACTCTTGGGGAGAATTGTAGTTTGGGAGAAATAAAATATACTTGCTTTTAACCATCCTGTTAGAAGTATTTATTTATCCTGATAATTTTAAGCCAACACAGTAGTCTTAAATTATTTCTGAATTTCTAATCTGTGAAAGCAGTAAATGAAAGATCTGTCGTGCAACTGTTGAAACAAATTGTTGACTACATTGACCATAATTCAATTTAAAATCTTGCCAATGATGTACAGTTTTATGGGTAAAATTGCTGTGGTTGGTTGCATTACATGACACACAAAACTGTCCTCTACCTCACGTGAAATAAGTATTTTATATGGTTTTACTATAAAACAAGACTCATCTATCTGGTCACTTAGTTTACAAATTTTGAATTATATTTATTGAAACATGACATACTGTGCTCTTAGCTTATACCTCAATTGTATTTTGTGCTGTTTTCCATTTTCATGCCTTGTAAATAACTTGTATAGATTGTGGATCAAATTCCAAATAAAAACTTTTAATGCCAGTGAAATTGATTTAAGCCTTCTTGGTATCCTGTGTGAACTCAACTTTCTTGTTTCTTAAGATTGACATTTTCTCCTTTGGTTCCTTTAAAGTCTATTCATTACACAGCAAGTGACTAGGAACTTTTTAAAAATAGTAAAATGTGAAATTCTGTGTGATTTTGTTTTATTCTGTTGGCCATACTGCACAACATCTGGGACTCTAGTTCCCTGACCAGGGATCTAACCCTTGTACCCTGCATTGGAAGCATGGAGTCTTAACTAGTGGACTGCCAGGGAAGTCCCCTATGTGATGTTTTATGTGTGTTTATTGTGTGTTTATTCTTGCTTTAACATCCTTTCCTCACCTCCACC EMBV3_17101 GAATGAGACTGACTTTCTCCTGTGACTTTGAGGGTGACGTTAGGTAGAGGAGTTGTGAGC Gene GeneID:508271|DSN1:NM_001100323:943_cdna Constitutive 1 NULL GeneID:508271 13 GENE DSN1 NULL DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) EMBV3_07047 GCTCCGTGGGCTATATTCAAAACTACAGATGCAGAGGCGAAGACAGCAAAGTCCAGGAAG Gene GeneID:617707|PPAP2B:NM_001076473:118_cdna Constitutive 0 NULL GeneID:617707 3 GENE PPAP2B MGC128313 phosphatidic acid phosphatase type 2B EMBV3_24298 CTCGAGGTGGTCCCTTCCTCTCCTTTGGAAAATTAAACTCGTGGGACTCTGTTCTCAGGG Gene BVV0102_197710 + 0 NULL GK000006.2:113701415-114974620 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20680 AGCTGTTACTGGCTAGTTCTTTAAACTGATATTATTACAAAGAAAGTACACGCTCCTGAT Gene GeneID:516008|CD200R1L:NM_001099374:80_cdna Constitutive 2 NULL GeneID:516008 1 GENE CD200R1L CD200R1 CD200R2 CD200 receptor 1-like EMBV3_14908 TGGGAGAAGAGCAATCCAGAGGAAATAAGTGCAAAGGCCCTGAGATTGGGACCTGATTGC Gene BVV0102_098915 - 0 NULL GK000024.2:30377273-30685542 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31663 GCTGTCTGGAAGGGAACTTGGTATCCAAATAAAGCAGGTAACCTCATTTTACTTCAAGGG Gene GeneID:613265|ZNF148:NM_001033121:89_cdna UTR3_Alt 2 NULL GeneID:613265 1 GENE ZNF148 NULL zinc finger protein 148 EMBV3_31035 ACAGCTGACCCCGGAACACCAGACTGTTGTCTACCAGATGATCCAGCAGATCCAGCAGAA Gene GeneID:538601|MLLT6:XM_002695924:300_cdna Constitutive 0 NULL GeneID:538601 19 GENE MLLT6 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 EMBV3_09007 GGAAGAGAGTCTTGGAGCTTTCTCATCAACTGGAACCAGCTCTTTATGGTTCACATGTGG Gene BVT0102_280875 + 0 NULL GK000006.2:109309624-109330258 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210840 1 XLOC_129350 NonCoding TCONS_00210840 XLOC_129350 NonCoding NonCoding - 6:109323830-109324904 - TSS158347 1074 1 TCONS_00210840_2 73 0.495344506517691 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.67158555100601e-06 0.000260603034967674 0 2.45918201016081e-05 0.000680167144732754 0 0 0 0 2.07281305033159e-05 0 0.000171704867446658 0 0 0 0 0 0.00026310614050284 XR_231483.1 LOC101904700 PREDICTED: Bos taurus uncharacterized LOC101904700 (LOC101904700), 0.0 731 99.04 0.385474860335196 0 noncoding 0 0 0 0 0.00230556693908313 0.983452657168822 0.0490000302714522 0.472179317895281 GGGATTTTCAGCCCTTCTGTCCTTCACGAGCCTCTGCAGGGGTGTGCTGTGCCGGGGGCGGTCAGCCCAGGACAGGGAGGGGCATCTGCTGTGTGTAGGGTGCAGCCCAGAATTTCAGAGGATTCCGTTAGCTTTGTGATAAATATGTAGAAACCTCCTCTGAGGTTCTTGTGAAAGATAAAAGGCCTGTGCCATTGGCAAAATGCTTCCTTCCTGTGCTTGCGAAAGTGGCTGAAAACATGATGACAAACGAAAATGCACTTCTTTGTCAGCAAATACGATGAGGAAACCCACAGCAAACCCTGGAGAAGGTTTGAAGCAACACATCCTGAAGCAGATGACTGTGTGGGAGGGTGGCTGTAGAGCTGGACGGGAGTTACAGAGGTTTCTTGCAGGTCTCAGCGGAGGGTGTTTGCCAGGATCTGTTTCAGTCACGAAAACAGGCAGGGTTACTTTCTGTGAGCCACTGAAGGTCAAGGAGGTGCTGGAGGAAATAGTTTAACATCAGCTAATTAAGTGGGGAAATCCTGTAATCTTAAAAGCTGTATCGCTGCACGTTACCAAGGAAACATTAAGTAGGTTTGATTAATACAGGTTTAAATCTTTGGTATAACTAGATGAGGTAAAACTAGAATTTTTTTTTTCTTATTTTTGTTTTGGGTGCACTGGGTCATAGTTTTAGCACAGGGGAGCTTTAGTTGAGGCATGTGGGATCTCGTTCTCTGACCAGGGGTCACACCTGAGCCCCCTGCATTGGGAGCGCAGAGTCTTGGCCACTGGACCACCAGAAAGTCCCAAAACCAGAATTCAGAAGCAAATGACAAACCTTAAAAAAAAAATCCACCACATGTGAACCATAAAGAGCTGGTTCCAGTTGATGAGAAAGCTCCAAGACTCTCTTCCTTATTGAGTGTTGGACTAGGAATACACGCGTAGAATACATGTAGAAGGAACACAAAAATGTAGAAGGAAGAATGTGTGGAGTTGAGCCATAAAATTGCTCTTTTGTGAAAATGATGACTGAATAGTCTGTAACAAGTAAAGAGATTTTAAAAATATCCCATAAAGAAAAAC TCONS_00204172 . 5' 5355 TCONS_00204172 . 5' 5355 EMBV3_07534 GACACCAAGGAAGATGTATTTGTACACCAGGGTGCGGAGGCAGCAAATGTTACAGGCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36595 AGTACAAGTACCAGCTGCGGTCACACATGAGCATCCACATCGGCCACAAGCAGTTCATGT Gene GeneID:100335506|LOC100335506:XM_002707778:280_cdna Constitutive 0 NULL GeneID:100335506 22 GENE LOC100335506 NULL zinc finger protein 651-like EMBV3_39944 TGGACAACTTCGGGATCTATGTCGACAACTACCACTGCGACGTCAACGACAAGGTGTCCT Gene GeneID:100336427|LOC100336427:XM_002683952:2_cdna Constitutive 0 NULL GeneID:100336427 Un GENE LOC100336427 NULL mucin 2-like EMBV3_00718 TAAATGGCAAAAGTGGAAAGCTAGCCAGGTGATGTTGGCTGTAGTAGAATTGTTCTGCCC Gene GeneID:515299|MED4:NM_001034486:106_cdna Constitutive 0 NULL GeneID:515299 12 GENE MED4 MGC128821 mediator complex subunit 4 EMBV3_43449 ATCGGGGGCCTGGATAAGCAGATTCAGGAGCTAGTGGAGGCCATTGTCCTGCCAATGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11895 TCCCCCCGAAATCTCCTTTGAAGCGAGGTCAAGGGTCAAAAAGTAGCCGAAAGTGGCCAA Gene BVT0102_146654 + 0 NULL GK000007.2:45247466-45271969 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220794 1 XLOC_134111 NonCoding TCONS_00220794 XLOC_134111 NonCoding NonCoding - 7:45270354-45270963 - TSS164792 609 1 TCONS_00220794_1 59 0.142857142857143 1 0 2.23410325067201e-05 0.00028049814219177 0 0 0 1.17472835985107e-05 0 9.71218260405416e-06 6.47793887789667e-05 0 0 0 0 0 0 4.33687557462328e-05 0 0 0 0.000153511648274445 0 0 0 0 0.000147898526187963 0 0 0 0 0 0 noncoding CATGTTCTAATTAGGGCTGGCTTGTATGTTGGTGTGACTTGTGGTCCCCCCATCCCCAAAGCCACAGCAATCTGCCTTCTGTGGGTCATTTGAGAATCTGATGAAAGTCCTAGATGTCCCCAAGAACACACACAAGGACACACTCAATTTCACACATAGATTTAGGCAGTCCACAGGTGTCAGGCTCAGAACTCGCAGCCTAGAGCCCGAATCTGACAGTGTCAGCTCCCATCGTTCCCACTCAAGACAAGCAGTTTGCTCTGGCAAAATAATCAAGTGATAAAAAACAGAAAGGTAGAAAAAACCCACAGGCCTGGAGGAATTTTCAATTTCATCAAGCCCTAGTATTTTGCCATCTCTGTATTTTTCATCCAAAGCACTTTGCTGGCACCATGCCAGCTGAGTACTGCGTTTTACCCCGTGAGATTCTTTAGGGTAGAGACGGTCCAGCGCACTTCTCGCCCCGTCTGGCCTGAGAGATGCTTAATAAAGGCTTTCTGCCTTCAATTGGCCACTTTCGGCTACTTTTTGACCCTTGACCTCGCTTCAAAAGAGATTTCGGGGGACAGGCCCTAGCAGGCGCCCACCAGCATCTGTGAGCCGTATCCG TCONS_00213151 . 5' 1416 TCONS_00213151 . 5' 1416 EMBV3_40700 CTCTTAGCTCTGCTTCTCTCTGCGTTGTTTCTGCTTACGGTAGGTTCTCCAGTTAGGCGG Gene BVT0102_016017 + 0 NULL GK000002.2:50592199-52274408 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102443 TCONS_00102442 TCONS_00102445 TCONS_00102440 TCONS_00102439 TCONS_00102441 TCONS_00102446 TCONS_00102444 1 XLOC_061865 Coding TCONS_00102445 XLOC_061865 NonCoding Coding - 2:51343363-51366602 - TSS76273 329 2 0.985928221017299 0.00314886619820136 0.00419296771245195 0.00355621217474285 0.000574881798815784 0.00322892424677784 8.8389213471599e-11 0.00185225458049298 0.0045747259967502 0.00145430422336307 0.00223174253263658 2.82517748037456e-08 8.91918327444228e-06 0.000899445737705527 0.000757959731271323 0.00210138224226876 0 0 0 0.0121393936320622 0.00556489232507105 0.00702279763615755 1.05874063344819e-07 0 0 0.00776574248474141 0.0193804429251952 0.00639515504049587 0 7.1672069581868e-08 0 0 noncoding 1 0 1 1 -0.156722212089012 0.313174949322339 0.0333278818820228 0.57834446354809 TTGACTTACTTCAGATCAAACAGAGACAAGGAGACAGTAAAGTTAGAATCTCAGATTCTTTGCTTAAAACTTTTGAGGAAGGGGTACGTTTTTTCAGGTGCAATTGCTGAGAGGATGGAAGATGAGTCTAGCGCTGTCAGCTGCCTTCTGTCCGCCTAACTGGAGAACCTACCGTAAGCAGAAACAACGCAGAGAGAAGCAGAGCTAAGAGATGGAAAGACTCCTGAGAAGGCCCCAAAACAGATTTTAAACCACAGAGTGGACATTTTCAGATTCAGATTTCATCTTGCTATCTGCATTTTCCTTCAAATAAACGTGCTTTAATATTT TCONS_00105308 r 5' 780921 TCONS_00105308 r 5' 780921 EMBV3_40042 TGGACTTTGGGTGATAATAATGTGCTCATGCAGGTTCCTCAACTGTGACAAATGCACCAC Gene BVV0101_012531 + 0 NULL GK000001.2:72236770-72476849 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10982 GGTTTGAACCAGACTGTGGAGGAATTTGTTGGGGAGCTGAATTTCGGGCTGGTTGAGGTT Gene GeneID:100139548|LOC100139548:XR_084645:358_cdna Constitutive 0 NULL GeneID:100139548 23 PSEUDO LOC100139548 NULL similar to superkiller viralicidic activity 2-like EMBV3_25996 ACTTGTCTGTTGGTCCCCTGGTTGAGACCTCATCTTCCAAGGCAGGAGTGGTGGGTTTGA Gene BVV0102_024594 + 0 NULL GK000004.2:99033591-99118953 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37113 ATCTGCCTGAAACTCGCCAGCTGAGCCCCGCGACACTTGCCCGCTCATCTGCCTAATAAT Gene BVV0102_285193 + 0 NULL GK000028.2:11272890-11416559 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161432 TCONS_00141907 2 XLOC_098323 XLOC_086334 NonCoding TCONS_00141907 XLOC_086334 NonCoding NonCoding - 24:24951835-24952575 - TSS106118 740 2 TCONS_00141907_3 67 1 0 0.000673272013170548 0.000117238483889316 0.000112295543433933 0.000191144574332355 0.000145785151010061 0.000256786649499112 7.07291830488295e-05 0.00022330467153588 7.69973505470308e-05 3.45654648927115e-05 0.000105107534549809 5.17716237833332e-06 2.76265520182886e-05 0.000506693844593674 8.82449506884828e-05 0.00040866569767419 0.000452636994762735 8.47667568467815e-06 0 0.000226433148650447 1.56670315984358e-05 0.000172146107020497 0.000216333991136478 0.00231763385016205 1.56046835018451e-05 0.000380615500014068 0.000179412530308763 0.000242076715906888 0.000406135791250986 7.04136831667632e-05 0 noncoding GAGTATCAGGCAGATGAGCCGGCAGTTGTCGCGCGGCTCAGCTGGCGATTATCAGGCAGATGAGCGAGCACGTGTCGCGCTGCTCACCTGGCGAGTATCAGGCAGATGAGCGGGCACGGGTCGCGTGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGTGCAGGTGTCGCGCGGCTCAGCTGGCGATTATCAGGCATATGAGCGGGCAGGTGTCGCACGGCTCAGCTCGCGAGTATCACGCTGATGTGCAGGCAGGTGTCGCGGGGCTCAGCTGGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGCGGCTCAGCTGGCGAGTATCAGGCTGATGAGCAGGCAGGTGTCGCGGGGCTCAGCTGGCGATTATTAGGCAGATGAGCGGGCAAGTGTCCCGGGGCTCAGCTGGCGAGTATCAGGCAGATGAGCAGGCAGTTGTCCCGCGGCTCCGCTGGCGAGTATCAAGCAGATGAGCGGGCAGGTGTCGCGCGGCTCCGATGCCGAATATCAGGCAGATGAGCGGGCAGAGGTCGCGCGGCTCCGTGGCGCGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCTGCTGGCGAGTATCAGGCAGACGAGCAGGCAGGTGTTGCGCGGCTCAGCTGGCGAGTATCAGCAGATGAGCAGGCAGGTGTCGCGGGGCTCAGCTGGCGAGTATCAGGAAGATGAGCAAGCAGGTGTCGCGCGGCTCTGCTGGCGAGTATCA TCONS_00138673 . 5' 52287 TCONS_00138673 . 5' 52287 EMBV3_06181 GTGCGTGATCAACTTTGATCGGAGGTTCGTGACATTGTATAGGAGTCAGCGATCTAGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39326 TTTAGCAATCCTAGACTACATTGTCCAGCCATCTGAACAGCTAGGATCCTTTAAGTCTTG Gene BVV0102_227579 + 1 EMBV3_13447 GK000001.2:28612241-28659455 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003063 TCONS_00003064 1 XLOC_000777 Coding TCONS_00003063 XLOC_000777 Coding Coding GBE1 1:28657363-28972849 = TSS1595 4479 1 TCONS_00003063_3 669 0.042866711319491 17 0.985856696831862 0.000152369795397571 0.000334608304785515 9.19392516828476e-05 5.59460508215653e-05 0.000174177935843642 7.11415805772896e-05 0.000131705257471791 0.000113316688748595 0.000230692390326278 1.61006287444948e-08 1.008666955341e-11 9.41620100141697e-06 8.73987091724427e-09 1.40924440097672e-05 4.86805022539989e-08 0.0022200939988552 1.30855026678419e-07 0.000716912214990446 0.000149901491306734 0.000246982797466411 8.15355103667081e-08 0.000275776689849973 0.000621506806386373 0.00130210175948202 0.000211148504740552 0.000101509113713576 8.8012566098466e-08 0.000122400983024759 5.17932390213172e-05 0.000112216776606918 NM_001122729.1 GBE1 Bos taurus glucan (1,4-alpha-), branching enzyme 1 (GBE1), mRNA. 0.0 2818 99.75 0.350747934806877 NM_000158.3 GBE1 Homo sapiens glucan (1,4-alpha-), branching enzyme 1 (GBE1), mRNA. 0.0 2531 84.81 0.506363027461487 TCONS_00003063_3 sp|Q04446|GLGB_HUMAN GLGB_HUMAN 1,4-alpha-glucan-branching enzyme; 0.0 1236 85.39 0.998505231689088 3 coding 0 0 0 0 -0.0315005862841344 0.861114424053432 0.0297371542734117 0.554272963049735 AGAATAAGGTCAGGGTGGGTCAAGATCTGCCAGGACCCCCGGCGGAGCCGCTGAGGGAGGAAAGGGCAGGTCTCCACGGCCTCCAGGTGGGAGCCGCGTGAGTAGGCGGAGGGGCCTGTCTGGGCGCCTCCTCCCTTCGCGGGACGTGCGTCTGGGGATCACTCCGGCCCCGCTCCTCCCCGCCGGCGGGGGGAGGAAGGGGGACAGGGGGCCGTCCCATGCGGCTATAAAGAGCCCTGGGCCTCCACAGTTCGCCTCGGCTCGCCCGGGCGTCCTCTGGCTCCGCTCTCGCCGCTTTCTTCCCGGCTAAAGCTCCCGCGGCCGCTCCGGCTCCACTCGACCCTCTCGGGCCTCGGCTGCTCGGGCTGCGGCGGAAGATGGCGGCTCCGGCAGGTCTCCCGGCTGAGGCGGCTGGGGCCGAATGCTCTGAGGAGGCGCTAGCCGCCGCTCTGGCGGACGTGCCCGAACTAGCCCGCCTTCTAGAGACAGACCCGTACCTGAAGCCCTACGCTCCGGACTTCCAGCGCAGGTATAAGCGGTTTAACCAGACTTTGACCGACATTGGAGAGAATGAAGGTGGTATTGATAGGTTTTCCAGAGGTTATGAATCATTTGGCGTCCACAGATGCGCTGATGGTGGTTTATACTGCAAAGAATGGGCCCCAGGAGCTGAAGGAGTTTTTCTTACTGGAGACTTCAATGATTGGAACCCATTTTCATACCCATATAAAAAACTGGATTATGGAAAATGGGAGCTGTATATCCCACCAAAGCAAAATAGATCTGTCTTAGTACCTCATGGATCCAAACTAAAGCCAGAATACTGGTATAAATTTAAACATTCCAAACCAAAGAAGCCAAAAGGTCTACGAATTTATGAATCTCACGTGGGAATTTCTTCCTATGAAGGAAAAATAGCTTCTTATAAACATTTTACATGCAATGTACTACCAAGAATCAAAGACCTTGGATATAATTGCATTCAGTTGATGGCGATCATGGAACATGCTTACTATGCCAGTTTTGGTTACCAAATCACAAGCTTCTTTGCAGCTTCAAGCCGTTATGGAACTCCTGAAGAGCTGAAAGAACTGGTTGATACAGCCCATTCCATGGGTATTACAGTGCTCTTAGATGTGGTACACAGCCATGCGTCAAAAAATTCAGAAGATGGACTAAATATGTTTGACGGGACTGAATCCTGTTACTTTCATTATGGACCTAGAGGGACTCATCTTCTATGGGATAGTCGGTTATTTGCCTACGCCAGCTGGGAAGTTTTAAGATTTCTTCTGTCAAACATAAGATGGTGGTTGGAAGAGTATGGCTTTGATGGATTTCGTTTTGACGGTGTTACATCAATGCTCTATCATCACCATGGAATAGGTGAGAATTTTTCAGGTGATTACCATGAGTATTTTGGACTACAAGTAGATGAAGATGCTTTGACTTACATCATGTTGGCAAATCATTTGGTTCACACACTGTATCCAGATTCTATAACAATAGCTGAGGATGTATCCGGAATGCCAGCTCTATGTTCTCCAATTTCCCAGGGAGGGGGTGGTTTTGACTATCGATTGGCTATGGCAATTCCAGATAAATGGATCCAGTTACTGAAAGAATATAAAGATGAAGATTGGAACATGGGGAATATAGTGTATACACTCACAAACCGACGCTACCTTGAAAAGTGCATTGCCTACGCAGAGAGCCATGATCAGGCACTTGTTGGGGATAAGACGTTGGCATTTTGGTTGATGGATGCTGAAATGTATACCAACATGAGCGTTCTGACCCCATTTACTCCCGTTATTGATCGTGGAATACAGCTTCATAAGATGATTCGACTCATTACTCACGCACTCGGTGGAGAGGGGTATCTCAATTTCATGGGTAATGAATTTGGGCATCCTGAATGGTTAGACTTCCCAAGAAAAGGAAATAATGAGAGCTACCATTATGCACGAAGGCAGTTTCATTTAACTGATGATGACCTTCTTCGCTATAAGTTCCTAAATAACTTTGACAGGGATATGAATAAATTGGAAGAAAGATGTGGTTGGCTTTCAGCTCCACAGGCCCATGTGAGTGAAAAGCATGAAGACAATAAGATCATTGCTTTTGAGAGAGCTAGTCTTCTTTTCATCTTCAACTTTCATCCAAGCAAGAGCTATACTGATTACCGAGTTGGAACAACATTGCCAGGAAAGTACAAAATTGTGCTCGATTCAGATGCAGCAGAATACGGAGGACACAAGAGACTGGACCACAATACCGAATTCTTCTCTGAACCTTTTGAACATAATAACTGTCCCTGTTCTCTTTTGGTGTACATTCCAAACCGAGTGGCCCTCATCCTTCGCAATGTGGACCTGCCCAACTGAAGAGATCTGATTTCAGCTCCCGCAGAGGAAGACCTGTGCTTTGTTTTCCCACGCTCACTGTCCCAGAACTTGTAATGTGTAAGCTTTTCAAAATATATTTGTCTAGACGAAATGTCCGATGTCTGAAATTCAGTATTGGTTTATGAAAATGAATGTCAAACTTTATTCTTTAAAGAGTAGAAGGGGACATGTTTTTGAAATTTTAGCAATCCTAGACTACATTGTCCAGCCATCTGAACAGCTAGGATCCTTTAAGTCTTGTATATCATGCCTTTAAAGAATTTTGCCTTACAGCCCAATTATTTAATCCTTTTAAGTTCAAGTTTGAATCATGTATCCATGTTTGATTATTTCTGTTGAATGTATACAGTATTTTTTTCTAAGGCAAATATTTGGTGACTTTATTTGTTCTGGTTATCTCTTGGTCTAAATTACAAGACACTAGAGATTGTTACTTTCCTTTTTCAAAGTGTGTTTAGAAATACTGTAATAAACATATAGTAATATATAAAACAAAGAATTGTGTCAAATATAAAAGTTGTTGCTTATGAACCCATCCATGCCTTATTTTGCATAAGTTTTATCTTGTCTCTATTTCATTTAATATCTTGGTAGATGCTAGTATCTTCATTTCTGAAGGCTTGACTTGGTAATTGTAACATTTCAGAAAACATCTTTTACTTTCAACCAATAAAAAAAAATATTGCACAGTTGTCTCTGCTAATGTTTATTTTACTGTGATGTTATGGAATTTTTTTAGAGTGAAATTTAAATGCCTATCTCAGCTCTGAGACCTTCCTCACACTTATGCACATATGCATGATGGACTAGGTGTGGGAGTTAATACTTTTTTTTTCTTTAGGTACTATTTTGTAACTTGAAATTATATCAACCAACTCAGATATCTAAGCTCCTCTCCAACTCTAAACCTGAACACTTTTAGAAGCTGAGTTAACTGCTTCAACAGTTAATAGTGAGATACTCCATCATGAAATTGCCCCTTGGTATATGAAATAGCAGGCCACAAATGTGTAATCACTGATATGTAATCCATTTGTAACTGAGAAATTATGATGGGGTCGCTAGGAGTCGGGCACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAGTGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCGGGGAAAGAGGAGCCTAGTGGCCTGCTATCTATGGGGTCGCACAGAGTCGGACACAACTGAAGCGACTTAGCAGCAGCAGCAGCATGAAACATAAAGTATTTGTCACCTTTTTAAAGATTTAATATTTTCCTTTACGTTAATACTGACTGCTGCTTTGTTTTTAGCCTGATTATAGTGACTAATAAGGAGTACATGAAAGTCTTTCTCTTAAAAACTGGTTTAGTAATGGAAGAGATTAGCAAAAGAGACTTCTTTTATAGCTAAACCTGTGTCTTAACCATCTTCTTTATCATTTGAGTAAAACCTTAAATCTAGGGCTGACATGTGTAATTTGCTTTAATTTCAAAGTAGAGTAATAGTTTGATTTCCTGACAGCGAAGCCAGCTGATGGTGATACACCCTAGAAAACAACTGAACGAAAGCCTCCTGTAAATGCTTTTCCCCTTTCAGATATGTTATTAACATCTTAGTGCTGCCACGATCCTGTACCATGCCTGTTACTGATAATAACATAATGTACAACCCTGATGTTTTGTGTTCTAGCTTATAATTTCTTACCTTTCTTTACATTTCTTATGTATAAAGATATATGCTAATTTTCTATCATAGCTCTTTAAAAAATGATAAGGAATTACTTCACACCTAGAACTTGTTTTTTTTTCCCCCCTTCGACCTCTGTGGAAAATCATAAAGACCAGTGCAGTTATATGCTATATTTTCATTATGTTGATTGACCTTACTAATACGGTCTTTAGAATTCACAGTGTAAAGTTCAAATTTATACCTGATATAATGTAAGTTAATTGCCTTTGTCAAGTTTTTCCCCACAAGAAGGATGATAAATAGATATTGCTAGGTGTGGAAAATAAAAATATATGCAAATAAATAAAATATTGAGTCCAAAAT EMBV3_26441 CTTTAGAAATGAAGCTCCTACTGTTTAAATAGATATGGACACATTTGGTACTGAGGGAGG Gene GeneID:280841|LOX:NM_173932:2_cdna Constitutive 0 NULL GeneID:280841 7 GENE LOX NULL lysyl oxidase EMBV3_32082 CCCAGTGCAACCGGGTGTTGCGAATGCTTAGATGGCAAGACCATGGACTATGCTGAGGTA Variant GeneID:507314|POLR3C:NM_001038511:62_cdna 770^912 1 EMBV3_22562 GeneID:507314 3 GENE POLR3C MGC133926 polymerase (RNA) III (DNA directed) polypeptide C (62kD) EMBV3_29862 CACACACTCAATCCTCTTCAGCTTGGAACTCATCCTTCTGCTTTTTTCAGGGGTAGAGGG Gene BVV0102_323873 - 1 EMBV3_29005 GK000017.2:68316120-68354332 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076081 TCONS_00076086 1 XLOC_046727 Coding TCONS_00076086 XLOC_046727 Coding Coding SEZ6L 17:68248656-68318840 = TSS57195 6330 1 TCONS_00076086_5 1023 0.0105845181674566 17 0.910049442172606 2.48366368323346e-05 1.41641616494925e-96 3.78926971929972e-08 5.37600298306748e-47 1.03607411583117e-06 5.51094793723151e-07 1.81670510450454e-06 6.34967650883296e-154 8.16013483751528e-08 1.29840872833285e-05 3.53269905995835e-07 0 4.43898558032895e-07 3.92266513842058e-41 1.53842584963555e-05 4.57971561003954e-05 2.55738112813029e-06 6.14590235226048e-06 1.08768117978906e-26 5.33062722339375e-07 3.43946598362795e-07 0 3.78328293078495e-06 3.43824669781203e-06 3.77580524414493e-06 1.6464043059289e-06 8.33362013854462e-169 0 0 4.45511894729857e-06 XM_002694617.3 SEZ6L PREDICTED: Bos taurus seizure related 6 homolog (mouse)-like (SEZ6L), transcript variant X1, mRNA. 0.0 1.129e+04 100.00 0.988783570300158 NM_001184773.1 SEZ6L Homo sapiens seizure related 6 homolog (mouse)-like (SEZ6L), 0.0 5346 78.83 0.989257503949447 TCONS_00076086_5 sp|Q9BYH1|SE6L1_HUMAN SE6L1_HUMAN Seizure 6-like protein; 0.0 1696 85.96 0.979472140762463 2 coding 0 0 1 1 0.0558780771761281 0.72300415908911 -0.0389200714194987 0.512969643503279 ATGACCACCCTAGGAGACAGGGGACAACAGCCCCATGTCACAGCTCAGGAAACTGAGGCTCAGAGAGATGAGCCCCCGGAGGGAGATGCCGGCCAATCAGATACTTACCTTCTGCCCTCCGAAATCCTGGGGAGCAGCAGTCTGAGCAAGGAGAACCCCGAAGAGAGCGTGACCACGGCCCCTCTGAATCCAGTGCAGTCTGGGGATGAGCTTCGCGAGCCGGAGTTGGAAGGGACCGTCCCCTTCGCGCCTCAAGACCCAGCGGCTGTGTCTACGCTGCTTCCGCTTCCGGAGGAGCCGGGCACCAGGCACTCCTTCCCCGCCAGGAAGAAGCCGCCTTCGCTCAAGCAGGTGAACTCGGCCAGGAAGCAGCTGAGGCCGAAGGCCACGCCCGCAGCGGCCACGCAAAGGACCGCGTCCCAGCCGGCATCCCCGGGCCCAGTTCTGTCCATCGCCCCGGGGAAGCCCCGCCCACCCGGTGACCAGGACCCCATGGCCTCCGCAGGGGAGGAGACCCGCCCGCTGTCTCTGTCCTCCGAGGAGCCCCTCTGGCTGGAGCGGAAGGAAGGCGCGGTCCCCACGACCCCCGCGCCCCTGCAGATCGCCCCCTTCACCTCGCAGCCGCTGGTGGCCCACACGCTCCCCCGGAGCCCCGACCCCGGGGCGCCGGCCGTGCCCGAGGAGGCCCCGGAGGCTCCCCCCGAGGATGCAAGCCCCGTGACGGTGATGGACAAAGGGGAGACTGAGCTGACCGGGTCAGCCTCAGAGGAGAGCCAGGAGACCACCACGTCCACCATCATCACCACCACAGTCATCACCACCGAGCAGGCCCCAGCTCTCTGCAGTGTGAGCTTCTCTGACCCTGAAGGGTACATCGACTCCAGTGATTACCCGCCGTTGCCCCTCAACAACTTCCTGGAGTGCACGTACAATGCGACGGTCTACACTGGCTATGGGGTGGAGCTCCAGGTGAAGAGCGTGAACCTGTCCGAGGGGGAGCTGCTTTCCATCCGAGGGGTGGACGGCCCCTCTCTGACCGTCCTGGCCAACCACACGCTCCTGGTCGAGGGCCAGGTCATCCGCAGCCCCACCAACACCATCTCCGTGTACTTCCGCACCTTCCAGGACGACGGCCTCGGGACCTTCCAGCTGCACTACCAGGCCTTCATGCTGAGCTGCAGCTTCCCCCGCCGGCCTGACTTCGGGGACGTCACGGTGATGGACCTGCACTCGGGCGGGGAGGCCCACTTCCACTGCCACCTGGGCTATGAGCTCCAGGGCGCCAAGACACTGACGTGCATCAATGCCTCCAAGCCCCACTGGAGCAGCCGGGAGCCCATCTGCTCAGCCCCTTGTGGAGGGGCGGTGCACAACGCCACCATCGGCCGCGTCCTGTCCCCAAGTCACTCTGCAAATGCCAGTGGGAGCCAGTTCTGCGTGTGGACGATCGAGGCTCCGGAGGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGGCGCTGCACAAGAGGGATAGGATGATGGTCTACAGCGGGTTGACCAACAAGTCCACTCTTCTCTACGACTCCTTCCAAACCGAGAATGTCCCCTTTGAGGGCCTGCTGAGCGATGGCCACACCATCCGCATAGAATTCACGTCCAACCAGCCGCCGGCGGCCTCAGCCTTCAACATCCGGTTCGAGGCCTTTGAGAAAGGCCACTGCTACGAGCCCTACATTCAGAACGGGAACTTCACCACGTCCGACCCGACCTATAACATCGGGACCATAGTGGAGTTTACCTGTGACCCTGGCCACTCTCTGGAGCAGGGCCCGGCCATCATTGAGTGCATCAACGTGCGAGACCCGTACTGGAATGACACAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGCTCTCTGCCGTGGCCGGGGTGGTGCTGTCACCAAACTGGCCGGAGCCCTACGTGGAAGGTGAAGACTGTGTCTGGAAGATCCATGTGGGCGAGGAGAAGCGGATCTTCTTAGACATCCAGTTCCTGAACCTCAGCAACAGTGACATCCTGACCATCTACGATGGTGACGAGGTCATGCCCCACATCTTGGGACAGTACCTGGGAAACAGCGGCCCCCAGAAGCTGTACTCGTCCACGCCGGACCTAACCATCCAGTTCCACTCGGACCCCGCCGGCCTCATCTTTGGGAAGGGCCAGGGATTCATCATGAACTACATCGAGGTGTCGAGGAACGACTCCTGCTCTGATTTGCCCGAGATCCAGAACGGCTGGAAAACCACTTCCCACACGGAGCTCGTGAGGGGGGCCCGAATCACCTACCAGTGTGACCCCGGCTACGACATCGTGGGGAGCGACACCCTCACCTGCCAGTGGGACCTCAGCTGGAGCAGCGACCCCCCATTCTGCGAGAAAATCATGTACTGCACCGACCCCGGGGAAGTGGACCACTCGACCCGCTTGATTTCTGACCCTGTGCTGCTGGTGGGCACCACCATCCAGTACACCTGCAACCCAGGCTTCGTGCTGGAGGGGAGCTCGCTCCTGACCTGCTACAGCCGCGAGACCGGCACCCCCATCTGGACCTCTCGCCTGCCCCACTGTGTTTCGGAGGAGTCCCTGGCCTGTGACAACCCAGGGTTGCCGGAGAACGGGTACCAGATCCTCTACAAACGACTCTACCTGCCTGGAGAGTCCCTCACCTTCATGTGCTACGAGGGCTTCGAGCTGATGGGCGAAGTGACCATTCGCTGCATCCTGGGACAGCCATCGCACTGGAACGGGCCGCTGCCCGTCTGCAAAGTTAATCAAGACAGCTTTGAACACGCCTTAGAAGCAGAAGCGGCAGCAGAGACATCTCTGGAAGGAGGAAACATGGCTCTGGCTATCTTCATCCCTGTCCTCATCATCTCCTTACTGCTGGGAGGAGCCTACATTTACATCACCAGGTGCCGTTACTACTCCAACCTCCGCCTGCCTCTGATGTATTCCCACCCCTACAGCCAGATCACCGTGGAGACCGAGTTCGACAACCCCATCTACGAGACGGGGGAAACCAGAGAGTACGAAGTTTCCATCTAGAGAGAGCTCCACGTGGGACGGGAACGTACAAATACGAACGCAGCTACAACCTCCTTGAGAGACCCATCTAGAGACCATGTGGCATTTGATGGAAACCCCGGAGTGTCGGCTGGCTTTTCTTTAGACTCTTTACTGGAGACTTACTGTTTTCTTCGCTGTATTTATTATATTTAAAATCGAGTTTAGGTGTGTGGTTGGATGTATAGCAGCTACAGCCAAATTCGTGGCATGGCCTCAGTCGTGAAGGCGGGTGGAGGACCTGTAAAACGGCAAACGCAGCAGCTGAGGGAAGAGGGGAAAAAAACAGAACGCAACAGGCTGTCTCTCCCATAAGCAACTACGGCTGCATCAGATTGCATGCATCTTCAGGATCCATGCCCATGGTGTTTTCGTACAAATCTAAGGTTAGGTTGGAAAGGGGTATTTCTTGTTGAATTAACTGGGGTTGGAATTTGGCAAGGAGACTTAAACAGCTCTGCTCCAAAATCAGTCTGCATCCATCCTTCCGATTTCCCGGGCTTCTCAAAGGATTCGCCCCAGCTTCTTCCCCCCGGCCCCTCTGAGGGCAGCAAAGTTGTGACATGAACATTCTCTTTCACCACCCCAGCCTCCCTGGCTGCTGGCAAACTAAGAAAATGTTTTCTTTCTATAAAGGTGACAGATGACAAAGGAAAGTTTTCAGAGAAGATGAGCGATTTGAATTCCAGTGAAGAACTGGATGAGGGGGATCGCTGGGTAAGGGAATGGAGTGGATAAAATGTTCTTTTCCGTGACACTCTTCCAATGATGAAAGAGCAGGTAATTTATGCCCCCAGGGCCAGCGATCACTGTGTTCAGCAAGGCCACCCTCAAGCTGTGATGATTGATCTGCATGCTTTGGAGGCATGAGGAATGTTGCCTGTATAGTTAAAAGGGTATAGGGTTGCATAGGAGGAATCCAGAGATGAGCTCTGATGCCCTCCCGGGATGCTGGAACGCCAGAGCCCTTAAAATAGTGGAGATTCAAGCAAGGTGGCACCTTCAGAAGACCCTTACATTTAAGTATTTTGGAGGGAGGGTCCCATAGGAAGAAACTGCTTTTCTGTTCTCTGAAGCTCTAGCCAGATGTTGAATGGTGGTGTGAATGCTTGACCATGGAGGTGCTTAGAAATAGGAAAGGGGATTTAAAACCTCCATGGCATCCCATCATACTATTTGCACTCCAATGAGGAGGGAAGGAGAAGTTTCAGGCCGGGAAGGGCTTCTCAGCAGCTCATTAATCCTGTGAGCATCCTGGTATTTTATCAGGGTCCTTTGCCCCACCCCAATAGGACTGGTGAGCATGTGATTATCTGGAAGATTTTTTTTTCTAAATATAGGTGTAAAGAGAAGGCAAGGGGTAAGGATGCTCGGAAGTAATAGCCCATGTGAGGCTAGTTCATCTCCCAAGTGATGGCTGATGGCTCAGAGAGGTGCACCAGCCTGGTGATTTGGGGGTCCTCTCTGGCACCTTCTCATGCTCTCTAGAATTGTTTTAAATCAGCCGGTTTTCAAACATTGAAAGGCTTTTCAGGCTGCCCTGCCTTTGGGGCAATGGCCTGGAGTCCACGTCTTGGACGCTTGCTTAGAAAGCCTCTGGAACAGAATAGAGCAGTTGGCTTTGCAGACACACAGACACATACACCCTCCTCCCAGCAGGACCGTGGTCCTCAGTCTCGGGGGGTCTGAGGCCCACTATATTTTCCTTCTGCCAGAAAAGGATCCTGCACACTTGCTCCTTCCAGCATGCACTCATGATGCACAGCAAGAGGCCATAAAACGCTGCCTTCCATCCGCCCAGAGTCCACCCCATTCTATGAAAGAACCAGAGGAGAAATGTTCCAGACTGTTAGTGAGCAATGTCATGTCTGGAGAAACAGCAGCAATGCAAATAATGCAAACCCTTTTTAAAAAAAAAAAAGGCAGAATCCAGTCGTTGCTTTGATATCTATTTGTGGCTGATTTAGCCCTAACCCTGGGTCATCCAGAATGAAGAAGTCTATTAATGACATTTAATATTAGAACAGACTATGGTTACGTGAACACTAAACGTTTGCCTTTCGTACAGACTGACAAAAAATAAAATCTTCATTCTAACCCCGTTCCCTAAAACTGGCCAAGCTATGGCCTAGGCTTTCTTACTGGCTGTTGGAAAGAGTAGAGAGGTGGAGTTTTGTTTTCTTTTTTTTTTTTTAAGGATTCCAATGTATCAGTTCTGTCTTAGTAGTACAGCTCCTGTAACCATGTTTTAAAAGTTTGTTTAAGCCAAAAGTTGGATCATGCAAGCTTGACAAGGTATAGTGTGATTGAAGGACAGGTTGGTGTCTATTTTTCTTTCTCAAATATCTGAATGTGTCTTTGTAATATGTAAAGGTGAAACAAATCATGATAATCATGCCAAAAATTTACCAGGCATCTCACTTCAGCTCCTGTCATGTCTGTTTTTCTAAGATCAATGTTAAAATCTGCTGGGATTAAATATTTTTGAATAGGCTACAATCCTGAGAAACTCGAGAACGGACTGAACCGTCCTACAAGCTACCCTTTGTAAAACATCGGGGAAATACGTTTACAGAGATTTCGAGCTTCAAAGAATGCATGTGATGGTGTGTATTACATGCTAATTCGTATAAGCTGTATCTGCCAGCTACCACCTTGTGCTTTAAAAGGCACACACTCAATCCTCTTCAGCTTGGAACTCATCCTTCTGCTTTTTTCAGGGGTAGAGGGTAGAATTATTTAGCCAACATAAGTATTCCGGTCGCTACTTGATGGCCATCCTTACTTAGTTCCACAGACATGCTTTAAAAAATGATCTTTTGAAGCCAGCTCCTTGGAGAGCCTGCAGAACCTCAGGCTGATGGCTTTGGAAACTGCCAAACAGCCCAGCAAGAAACAAAGTGGCTGCGTGACCCAAATGGTTGTATACGTGGACGGGACTTGGCAAACACATGGGTAGATTGAGGCTGAGTGTGAGCCTTGGTAAAAATGACTTTTTCTTTAGGGTCAACCCAAAGGGTCTGACTTTCCTATGCTTTTTGAGGTCACTGGGTCATTTGAGGTCAGGTTTTATTGAGTTGTTTAGAGCCCCCAAAGGTAGGTAGGCTTTCTCCTGGGGAGTTTTCATTTCCATTTTTTTGCCCAAATTAAATGCAAAACAAAATTTCTAAGCTAAAATAATGAAGTCATTTTCCACTTTGTATATATTGATGCTAATAAAACAAACGAAAAAGAGTCAAA EMBV3_40622 AAGGAAGGGCCACCAAGTGTGACGCATCCATCCTGAGCCAGAACCAAACAAACGGACAAT Gene GeneID:786629|E2F8:XM_002699083:58_cdna Constitutive 0 NULL GeneID:786629 29 GENE E2F8 NULL E2F transcription factor 8 EMBV3_39408 GAGCTGAGAGCGAGGCCGCGGAGGACCCAGAGCCCTGCCTGGCCCCCAGCCCGGAGCAGC Variant GeneID:317696|FGFR4:XM_002689008:49_cdna 112^254 1 EMBV3_12999 GeneID:317696 7 GENE FGFR4 NULL fibroblast growth factor receptor 4 EMBV3_34049 TGGTCCTGGAATTAAAGGAGACACAGCCTTTGCCAGGGCACACAGTCGAGACCCCCACTT Gene GeneID:522702|FCRLB:XM_002685848:382_cdna Constitutive 0 NULL GeneID:522702 3 GENE FCRLB NULL Fc receptor-like B EMBV3_13703 TGTGGTGCTGCAGCTGGCAGAGAAAAATGGCTATGTGACTGTCAGTGCTATCAAGGCCAG Gene GeneID:505628|SNF8:NM_001075211:59_cdna UTR3_Alt 4 NULL GeneID:505628 19 GENE SNF8 MGC142498 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) EMBV3_10090 AGTCAATCTGCTTTAGGTTGGGAAACCAGAAAACCAAGCCAGTTAACACTAACGTAGGGT Gene BVV0102_019504 - 0 NULL GK000003.2:43418924-43504600 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173175 TCONS_00173173 TCONS_00173174 1 XLOC_104310 Coding TCONS_00173174 XLOC_104310 Coding Coding AGL 3:43502635-43643998 j TSS128802 8669 1 TCONS_00173174_10 1532 0.0364517245357019 41 0.938965209886674 2.63690863911919e-12 1.68743700990114e-32 2.6678740008313e-25 1.11167203490711e-28 4.35645351430874e-32 1.05725768391517e-12 1.05082687660571e-05 3.45198024865366e-15 2.10590110457511e-21 4.14905591648562e-11 1.37021852139848e-06 3.85831722940437e-05 6.58868227794268e-41 5.42894928847375e-23 4.45196516533385e-05 0.000564104903890669 0.000752404867589346 9.4636381601378e-05 3.22738625833747e-06 2.40023298504244e-13 2.44977234536526e-26 0.000107414496615122 9.97440726410759e-05 7.51892084595595e-06 4.06585614314965e-19 1.01026254941314e-22 2.13419536449972e-30 2.26779588407647e-05 9.25681257702461e-05 3.39001465611096e-13 XM_005204113.1 AGL PREDICTED: Bos taurus amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase (AGL), transcript variant X1, mRNA. 0.0 1.320e+04 100.00 0.844157342254009 NM_000642.2 AGL Homo sapiens amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase (AGL), transcript variant 1, mRNA. 0.0 7140 89.17 0.627177298419656 TCONS_00173174_10 sp|P35573|GDE_HUMAN GDE_HUMAN Glycogen debranching enzyme; 0.0 3015 92.56 0.99934725848564 0 coding 0 0 1 0 0.0322525852650645 0.841778302537227 0.00553905716969144 0.916364088190887 CTGGCAGCTGACAAGTAGTTCAAGAGAACAGAAGGGTTAATTCTCAGAAACAGAGTCCTGAGACTAGTGCCGGTCTTGCAAATCCTGTTTTGCTGCTTAGTTTGGGAAACTCTCTTCTTATGGGTAAGCTGGCTCCACCCAGCTGCTGAGAAAGAGATACGAGTTGTTAACAAAACCGGAAGTTGGATAGGCTGCCTTTGCTTCTCAAGATGACAGCTCCTGGATTTACCGTCAGTGCCTTCATCCTTCTGTTGCATGTTAGTTTTGTGGCTAATTATCCCAGTGGAAAAGTAACAAAGTCATGCGGTGGAATGATTCCTGAGCATGGTCATACCCCACAGTCTCATCCCGCTCACAACATTTCAGTGAGTCAGAAGACATTCAGGCCAGGAGATCAAATCAAAGTTACTTTGTCAGGGCCACCATTTAAAGGCTTTCTCTTAGAAGCACGTGACGCTGAGAATTTGAGTGGCCCTCCTGTTGGCTCCTTCACACTGATTGACAGTCACGTGTCACAGCTTCTGACCTGTGAAGATGTACAGGGATCAGCTGTAAGTCATAGAAGTCCATCAAAGAAAACAGAAATCAAGGTCTTTTGGGATGCTCCAAGCGGTGCCCCAAATCACATAACCTTCCTAGCCACAGTCGTTGAGAAGTACAAAATCTACTGGGTGAAGATTCCTGGTCCTGTAATTTCACAACCAAATGTACCTCCTTTTACAACACCTGAAGCTACAATAGCACCCATGCCAACGGTACCGTCAGTCTCCCATTTAACAAGATCATTCAATGCTTCAGACTGTGGGAACAAGAAGTTCTGTATCAGGAGTCCTTTGAACTGTGACCCAGAGAAGGAGCGTGCCTGTGTCTTCTTGTCCTTCACACGAGATGACCAATCAGTGATGGTTGAAATGAGCGGTCCTAGTAAAGGCTATTTATCCGTGGCATTTTCTCATGACCGATGGATGAGGCACGTCCCGCCGTCGCACCTCCCTCGGGGCGAGAGAAAAACTGCTCACAGCAGTCTCCCAGGCCCGGGCCCCCAACGACTGGACTCTCGCGAGACTAGCGGTCCCGGAGACCTGGTGCCGAGCCTCCCGGAAGTGGGCGAGGGGACCTGTCAGCTCTCACCCGGCTGCGTGCTCTTGAGGCCCCCGTGGGAATCGAGGGTCTCCCTGGGGACCGGCGCGAGGCGGAGTCACGGAGAAGCTCTCTGCCACTCACACGGCGGCGTCGGCCCTGCCCCGGCTGCCGCCGCCCCTCCCTTTGCCCTTCACGGCGCCCGGCCCTCCTTGTCTGCAGCTTCCTTCTGCGCCTGGGCAGCCTGCCTTTCCCCTCTAGCTTTCCTTCTAGTCTCCTCCCCCGACTCTTAACATTGGAGTCGCGGGTCCTGCAGTGTCCCAGAAGCCGCACGTATAACTTGCTCGGTGGGCAACTCATTGGATTTCGGAGTTCTGTTAATTCTTCTGAAAGATTTCAAATCCTCTAGAAGCCAAAATGGGACACAGTAAACAGATTAGGATTTTACTACTGAACGAAATGGAAAAGCTGGAAAGGACCCTCTTCAGACTTGAACAAGGGTTTGAACTGCAGTTCCGATTGGGCCCAACTTTACAGGGAAAGGCAGTTACTGTGTATACAAATTACCCACTTCCTGGAGAAGCATTTAATCGAGAAAAATTCCGTTCCCTGGAATGGGAAAATCCAACAGAAAGAGAAGATGATTCTGATAAATACTGTAAACTTAATCTTCAACAAGCTGGATCATTTCAGTATTACTTCCTTCAAGGAAATGAGAAAAGTGGTGGAGGTTACATAGTCGTGGACCCTATTTTACGTGTTGGTGCTGATAATCACGTGTTACCCTTGGACTGTGTTACGCTCCAGACATTTTTAGCCAAGTGTATGGGACCTTTTGATGAATGGGAAAGCAGACTTATGGTTGCAAAAGAATCAGGCTACAACATGATTCATTTTACCCCACTGCAGACTCTTGGACTATCCAGGTCGTGCTATTCCCTTGCTGATCAGTTAGAATTAAATCCTGACTTTTCAAGACCTAATAAAAAGTACACCTGGACTGATGTTGGACAGCTGGTGCAAAAATTGAAAAAGGAATGGAATATGCTTTGTATAACTGATGTTGTCTACAATCATACTGCTGCTAATAGTAGATGGCTCCAGGAACATCCAGAAAGTGCATATAACCTTGTGAATTCCCCACACTTAAAACCTGCCTGGGTCTTAGACAGAGCACTTTGGCACTTATCCTGTGATGTTGCAGAAGGGAAATACAAAGACAGAGGAGTACCTGCTTTGATCGAAAATGACCATCAAATGAATTGCATTCGAAAAGTAATTTGGGAGGATATTTTTCCAAAGACTCAACTCTGGGAATTTTTCCAAGTAGATGTTCACAAAGCAGTCGAGCAATTTAGAGGACTTCTTACACAAGAAAATAGGAAAACAACAAGGCCTGATCCAGATCACCACCTTAAGATAATTCAGGATCCTGAATACAGACGGCTTGGCTGCACTGTAGATATGAATGTTGCTCTAGCAACTTTCATACCACATGACAATGGGCCAGCCGCAATTAATGAATGCTGCAATTGGTTCAGGAAGAGAATTGAGGAATTAAATTCGGAGAAGCATCAACTCATTAACTATCATCAGGAACAGGCAGTCAATTGCCTTTTGGGAAATGTGTTTTATGAACGACTGGCTGACCATGGACCTAAACTAGGACCTGTTACTAGAAAACATCCTTTGGTTACCAGATATTTTACTTTCCCCTTTGAAGACATATCCCTCTCTGTAGAAGAATCAATGATTCATGTCCCAAATAAAGCTTGTTTTCTGATGGCACATAATGGATGGGTAATGGGAGATGATCCCCTTCGAAATTTTGCTGAACCAGGTTCAGATGTTTATCTAAGGAGAGAACTTATTTGCTGGGGAGACAGTGTTAAATTACGCTATGGGAAAAAACCAGAGGACTGTCCTTATCTCTGGGCACACATGAAAAAATACACAGAAATCACCGCAACTTATTTCCAGGGAGTCCGTCTTGATAATTGTCACTCAACACCTCTTCATGTAGCAGAGTATATGTTGGATGCTGCTAGGAAATTGCAACCCAATTTATATGTAGTAGCTGAACTGTTCACAGGAAGTGAAGACCTGGACAATGTCTTTGTTACTAGACTGGGCATTAGTTCCTTAATAAGAGAGGCAATGAGTGCATACGATAGCCATGAAGAGGGCAGATTAGTTTACCGATACGGAGGAGAGCCTGTTGGATCCTTTGTTCAGCCCTGTTTGAGGCCTTTAGTGCCAGCTATTGCACATGCCCTGTTTATGGATATCACCCATGATAACGAGTGTCCTATTGTGCATAGGTCAGCATATGACGCTCTCCCAAGTACCACAATTGTCTCCATGGCGTGTTGTGCTAGTGGTAGTACGAAAGGCTATGACGAATTAGTGCCTCACCAGATTTCAGTAGTTTCTGAAGAGCGGTTTTACACTAAATGGAATCCTGCAGCATCGCCATCCAGCGCTGGTGAAGTGAACTCCCAGAGTGGCATTATTGCGGCCAGGTGTGCAATCAATAAACTTCACCAAGAGCTTGGAGCCAAGGGTTTTATCCAGGTGTATGTGGATCAAGTTGATGCAGACATAGTGGCTGTAACCAGACATTCACCCAGTATCCATCAGTCGGTCGTATCTGTTTCTAGAACTGCTTTCAGGAATCCCAAGACTTCATTTTACAGCAAGGAAGTGCCTCAAATGTGCATCCCTGGCAAAATTGAAGAAGTAGTTCTTGAAGCTAGAACTGTTGAGAGAAATACAGCACCTTATAGGAAGGATGCTAATTCAATCAATGGAATACCAAACATCACAGTAGAAATTAGAGAACATATTCAGCTCAATGAAAGTAAAATTGTTAAGCAAGCTGGAGTTACTACAAAAGGACCCAATGAATATATTCAAGAAATAGAATTTGAAAATTTGTCTCCAGGAAGTGTTATTATATTCAGAGTTAGTCTTGATCCACATGCGCAAGTTGCTGTTGGAATTCTTCGAAATCATCTGACACAGTTCAGTCCTCACTTTAAATCTGGGAGTCTTGCTGTTGACAATGCAGATCCTATATTAAAAATTCCTTTTGCTTCTATTGCCTCTAGATTAACTTTGGCTGAGCTAAATCAGGTACTTTACCGATGTGAATCAGAAGAAAAAGAAGATGGTGGAGGATGTTATAACATACCAAACTGGTTACCTCTTAAATATGCAGGTCTTCAAGGATTAATGTCCGTATTGGCAGAAATAAGACCAAAGAATGACTTGGGGCATCCCTTCTGTGATAATTTGAGATCTGGAGACTGGATGATTGACTATGTCAGTAACCGACTTATTTCACGGTCAGGAACTATTGCTGAAGTTGGTAAATGGTTGCAGGCTATGTTCTTCTACCTGAAGCAGATCCCACGTTACCTTATCCCGTGTTACTTTGATGCTATATTAATCGGTGCATACACCACTCTTCTGGATGTAGCATGGAAGCAAATGTCAAGCTTTGTTCAGAATGGTTCTACCTTTGTGAAACACCTTTCCTTGGGTTCAGTCCAAATGTGTGGAGTAGGAAGATTCTCTTCTCTGCCACTTCTTTCACCTTCGCTGACGGATGTGCCATGCAGGCTGAATGAGATCACAAGGGAGAAGGAGCAGTGTTGTGTGTCTCTAGCTGCAGGCTTACCTCACTTCTCTGCTGGTATTTTCCGCTGCTGGGGAAGGGATACTTTTATTGCCCTTAGAGGTCTACTGCTGATTACTGGACGCTATTTGGAGGCCAGGAATATCATTTTAGCATTTGCTAGTACCCTGAGACATGGCCTCATTCCTAATCTCCTGGGTGAAGGAACTCACGCCAGATACAACTGCCGGGATGCTGTGTGGTGGTGGCTGCAGTGTATTCAGGACTATTGTAAAATGGTTCCAAATGGGCTGGACATTCTCAACTGCCCAGTTTCCAGAATGTATCCTGCAGACGACTCTGTTCCTTTGTCTGCCGGCACAGTGGATCAACCATTGTTTGAAGTAATACAGGAAGCTATGCAAAGACACATGCAGGGCATACAGTTCCGAGAAAGGAATGCTGGTCCACAGATAGATCGGAACATGAAGGATGAAGGTTTTAATATTACTGCAGGGGTTGATGAAGAAACAGGATTTGTTTATGGAGGAAATCGCTTCAATTGCGGTACCTGGATGGATAAAATGGGAGAAAGTGACAGAGCTAGAAACAAAGGAATCCCAGCCACTCCAAGAGATGGATCTGCTGTGGAAATTGTGGGCCTGAGTAAATCTGCTGTTCGTTGGTTGCTGGAATTATCCCAAAAAAATATTTTTCCTTATCATTATGTTACAGTGAAAAGACACGGAAAGCTGGTGAGAGTCTCATATGATGAATGGAACAGAAAAATACAAGAGAACTTTGAAAAGTTATTTTATGTGTCAGAAGACCCTTCAGATGTCAGTGAAAAGCATCCTAACCTGGTGCACAAGCGGGGCATATACAAAGACAGCTATGGAGCATCAAGCCCTTGGTGTGACTACCAGCTCAGGCCTAATTTTACCATAGCAATGGTTGTGGCCCCTGAGCTCTTTACTACCCAAAAAGCATGGAAGGCCTTGGAGATTGCAGAAAAAAAATTGCTTGGTCCTCTTGGCATGAAAACTTTGGATCCAGATGATATGGTTTACTGTGGAACTTATGACAATGCCTTAGACAATGACAACTATAATCTTGCTAAAGGTTTCAATTACCACCAAGGACCTGAGTGGTTGTGGCCTGTTGGGTATTTTCTTCGTGCAAAATTGTACTTTTCCAGATTGATGGGTCCAGAGACTACTGCAAAAACTATATTTTTGGTTAAAAATGTCCTTTCTCGACATTATGTTCATCTTGAGAGATCCCCTTGGAAAGGACTTCCAGAGCTGACCAACGAGAATGGCCAATACTGCCCTTTCAGCTGTGAAACACAAGCCTGGTCAATTGCTGCTGTTCTTGAAACACTCTATGACTTATAGTTAGTTGACTCATGCATATATCTTAAGTATGCAACCAATTGTATTGTTGAATGCAGTTATAATGTAATGTAAATGCTTTATATGCACATGCTAAAGTCATTTTTTAAATCTCATTCATATAATATTGATGCCCTAATAGGTAAGACTATAAAGCATTGGTTTTGCTAATGTAGTTTTTGATTTGACTAAGAAAAAAAATTATCACTACCAATGGAATGTTTGTCTTTTGAATTCAAGAAGTATTCCTCAGATGTCTAGAAATAAATAATTTGAAAGCCAGAGTTTGAAAAAGAAAAATCATGTAATATTCCTTTCATGCATAAGTGAAATGAAATATGAGAATGTAATAATGAAAGAAATGGAAAAGTATCTTTAAATGGTGGTATATATTTTCTTCAGTAACAGTATATACTGAATAAGCTGTGGTTAATTAATCTTCTCAACCTTTTATTAATAGTATATCTGCTGCTGCTAAGTCGCTTCAGTCATGTCTGACTCTGTGCGACCCCATGGACGGCAGCCCACCAGGCTCCCCCGTCCCCGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCAATTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTCGCGACCCCATGGATTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTTCCAGGCGAGAGTACTGGAGTGGGTTGCCATTGCCTTCTCCAATAGTGTATCTAGCACCTTCCAAATTGCATTCAGAAGATATTAATGAATATGGAATCATGGAAATGTCCACCTACAATATATGTTTGTAAGTGAAGCACAGATGTTTATAATGTGCTTTTATTTTTTTCACTGATAGTGTAATATGTTTTTAATACAACGAATTTCAACAGTATATTTAACATATATTTAATTGTGCTAATGATGCATAGGCTATATGAAAAAATCACAAAGTATTAGAAATTTATTTTCTAAGAAAATTTTTATAAAATTAGTCTTGAGTTCCACTTTCCTACTTTGAGATGGTTTACATTTTCATAATGCAAACCTTCAGACATATTTATGAGAATTTTAAAGAAAAAGGTACTATATTAATTTTCTAAAAATAACTCTTTTTAGTTTGTGTATAAAAGTGTATTATATTGGTTTCCTGTTAACTGAAAACTGTTGACAAGTTTAGCATGGAGAACAAGCTTAAAATAGAGATATGAATTCAGCAGTTATCTTGACTCCAGTAAAGTCACTTGAATAGCTTTTCATGTGATTTGAAGATAGCTTAAATCTGGAAAAGTCACAAAAGGAAAAAGACTTTTAACATTTGTATGATTTGACATTTTTAATATTACTTATTTTCTAGATGATTTTTTTTAATTATCTCTTTTTGTCTCAAGAAGGCACAATTAGATCATTATACTTTCAGCTGAAGGAAAATAGTTGCAAAAATCCATTTCATTATTCAGTTGTAATATTTATAGTTAAAATAGTGGTACAATAACACTTTTCTCACCTAGAAGTCATATGCCCAACTCCCTTAACTATGAGGAAGGAGTGAAAATATTGAAAAACAAGTAAGCTAAAACTTCTGGGTAATAAAAATATAAAAATGTTTCAGATGCCAAATACCCATGTTCAACCCTACGTTAGTGTTAACTGGCTTGGTTTTCTGGTTTCCCAACCTAAAGCAGATTGACTTCTACATAACTTCTTCATTGATTTCCAAGTTTTCCTTCCTTCTTCATTGTTCAATGTCTGACCTCTAGTTAGAAAAATGACCTTCCTTGAGAGGGAGAACCATTAGTTATCAAAGATTCACATAGTTCTGTTGTAATTAAACTTCTATATTAAAAGTGGTAAGAAAAGTAACTAAAGACCAACATTAAATCTGTTTTTAAAAAAAGCAAGAAGCAATGGCTGGCTGATGGTTAAATGTGATAAATAAGTAAATGAGTAAATTAATCTTAATAAATAAATAATAACAAGCTTACAATTTTCAAAACATAGCCATATTGGGTTATCTATGGTAGGGCAAATATCCACCTCACCAGTACATTTTTACGATATCACATTACACTAGAAAATTAAGCAATTCATATTTTTATTAGGAATGTTAATGAAAGAATGTTATTATAATCTGCATGGCCTATTTTAAAGCTTAAGCATGTTACACATTATTTTATCAAAGATTGTTAAAATAATATTAATAGCTTTAGACTTTAGAGGAATAAATGTTTTTGACTAAAAAACATTTCAATAGAATACTTCATTCCTGTGTGGTTTTGAATGAGGTACCATTATATCACATACTGAGAATGGTTCTGTGCCCTGATTCTTAATTAATTCCGATCAGTCTTACTCTTTTACTGGAGAAGTTTGCCAGTTTAACCAGTATGCTGTGATAATTTAATATGTTTCACAGATAACTGAGGAGACATGAGACCTGTCATCCTGTCCATGAACGTATGTAATGCATTTCTGATACGTCTTCACCTGCTCTGTCTATAGGCAAATGTCACTTTTATGTCTGTGCCAAGAAAATAAAAATCTTTTCTAAAGGA EMBV3_34543 TGGTGGAGAGAAGCAAAGAATGGCGATGGCAAGACTATTTTATCACAAGCCCCAGTTTGC Gene GeneID:526059|ABCD3:NM_001105396:159_cdna UTR3_Alt 2 NULL GeneID:526059 3 GENE ABCD3 NULL ATP-binding cassette, sub-family D (ALD), member 3 EMBV3_31482 CTCCCTCCTTTGATCTATTTTTTTCTTTCTTTTTTTATTATGACAAAGGACCTCCCTTCC Gene GeneID:614766|RPRD2:XM_002686048:259_cdna Constitutive 3 NULL GeneID:614766 3 GENE RPRD2 NULL Regulation of nuclear pre-mRNA domain containing 2 EMBV3_06780 CTTCATCATTGGCTCCCTGTGGGACGAGGAGAGACTTACTCAGGAGTCGCTGACGCTGCA Gene GeneID:281583|AANAT:NM_177509:317_cdna Constitutive 0 NULL GeneID:281583 19 GENE AANAT NULL arylalkylamine N-acetyltransferase EMBV3_35914 TCACTAAGACTTGGAACAGTAGTTCATACTAGCAGGGAAGAGGACACTGTAGCAACCCAG Gene GeneID:514652|ISCA1:NM_001034470:5_cdna UTR3_Alt 2 NULL GeneID:514652 8 GENE ISCA1 MGC127704 iron-sulfur cluster assembly 1 homolog (S. cerevisiae) EMBV3_26015 GTTCGTCAGGGTTCCTTCCGTGGGTTCCCAGCACTCAGCCAGAAGAACTCACCTTTCAAA Gene GeneID:510973|NUMBL:NM_001076834:595_cdna UTR3_Alt 2 NULL GeneID:510973 18 GENE NUMBL MGC142865 numb homolog (Drosophila)-like EMBV3_02142 CCAACAAAAACTCAGACGCAAGAGAGACACTGGAGCTGACCAAACAGGATGTGTCATGGG Gene BVT0102_436264 + 1 EMBV3_29676 GK000023.2:19882825-19892714 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132684 TCONS_00132690 TCONS_00132687 TCONS_00132686 1 XLOC_080840 Coding TCONS_00132684 XLOC_080840 Coding Coding SLC25A27 23:19860577-19883939 j TSS99206 2276 1 TCONS_00132684_2 318 9 0.902957921321861 0.00120378992151856 0.00114434228697072 0.000994798780279695 0.0011526138696391 0.00150854058777286 0.000463519918801865 0.000550061867997521 0.000701021873015443 0.00150718369369074 5.04678113950803e-05 0.00013829677584034 0.000278633714002099 0.000263401539891279 0.000346352989451075 9.81496814162764e-08 2.10803521856028e-06 3.40948365859055e-44 0 5.74877934316393e-07 0.00104315753216041 0.000716989189636605 6.69455684289836e-05 7.63898263355964e-07 1.24446189136041e-06 0.00175389352883038 0.00173526729707099 0.000979686480996291 7.78408558125368e-07 3.44719087261777e-07 2.83993782467158e-08 XM_005223464.1 SLC25A27 PREDICTED: Bos taurus solute carrier family 25, member 27 (SLC25A27), transcript variant X1, mRNA. 0.0 4067 100.00 0.990333919156415 NM_001204051.1 SLC25A27 Homo sapiens solute carrier family 25, member 27 (SLC25A27), 0.0 1997 79.44 0.982425307557118 TCONS_00132684_2 sp|O95847|UCP4_HUMAN UCP4_HUMAN Mitochondrial uncoupling protein 4; 0.0 592 94.67 0.940251572327044 1 noncoding 0 0 0 0 -0.0812061685410801 0.628144187395776 -0.0217403069065009 0.72053949490526 GCTGTTTTCCGCTCCCCATCCACTGGGCTGTTCCAGCCTGGGGCTGCCAGGGAGGCTGCGGGTTCGTTGGGCCCGCCTGGCCGAGCCAAGCTAGAGAAATGATCCCCGCCTCGCTGCGTGTCGCTTGAGAAGGGGCCGCCCTGGCCCGGGTGGCAGGCCAGCCGCGGCGCGGGACGCGGGCCAGAAGGGGCGTATCGTCGTCCCGTGCTGCTGCTGAATGTCGACTCCAGACGATGCGGAGAGGCTCTCGCCGCTCGCCCAGAGATGGCCCCGCGCGTGCAAGTTCCTCCTGTCGGGCTGCGCGGCCACCGTGGCCGAGCTAGCAACCTTTCCCCTCGACCTCACAAAAACTCGACTTCAAATACAAGGAGAAGCTGCCCTTGCTCGGTTGGGAGATGGTGCAACAGAGTCTGCTCCATATAGGGGCATGGTACGCACGGCCCTAGGGATTGTCCAGGAGGAAGGCTTTCTAAAGCTCTGGCAAGGAGTGACACCTGCCATTTACAGACACATAGTGTATTCTGGAGGTCGAATGGTCACTTATGAACATCTCCGTGAAGTTGTGTTTGGCAAAAGTGAAGATAAGCATTATCCCCTTTGGAAATCAGTGATTGGAGGGATGATGGCTGGTGTTGTTGGCCAATTTTTAGCCAACCCCACTGACCTAGTGAAGGTTCAAATGCAAATGGAAGGAAAAAGGAAACTTGAAGGAAAACCACTGCGATTTCGTGGTGTGCATCATGCATTTGCAAAAATCTTAGCTGAAGGAGGAATACGTGGGCTTTGGGCAGGCTGGGTACCCAATATACAAAGAGCAGCGCTGGTGAATATGGGAGATTTAACCACTTATGACACAGTAAAACACTACTTGGTATTGAATACGCCACTTGAGGACAATATCGTGACTCATGGCTTATCAAGCTTATGTTCTGGACTGGTAGCTTCTATTCTGGGAACACCTGCTGATGTCATCAAAAGCCGAATAATGAATCAACCACGAGATAAACAAGGAAGGGGCCTTCTGTATAAATCATCGACTGACTGCTTGATTCAAGCTGTTCAAGGAGAAGGATTCCTGAGTCTCTATAAAGGGTTTTTACCATCTTGGCTTCGAATGCAATCTGATTGGATCACACAAGACCACCCAATGAGACCCCGGCACAGCGTTTTCTAAGGAAGGATCAAATCCTGACCACTGAACTTGAGCGAGAAGATTCAAGTTTGGGATGCTATGCTGTAGAGCCTGCTTAGAGGAGAAAGTGCCAGAAGGGAGACAGCATCTCAGACCTGAAGTGGACAGTAGGAATGTGGAAAAATACATCCATACATAGGGACCAAGGAATATACTTAATGTGTTGTGTCAGTATTTACAACTGAAATCTGATAATTTACTTTTGTGTTGTCATTAAAGTGCATATTCTATAAACTAAAGGGAGGTGAATGAATAAACATTTTGAGTTTCCCTAGTGTTGAAGGAGGTTGATGTACCTTTTCTTGCCAGGAGAGTGAAAAAAAAAAGTTTGGATCTCAAGGATAGAAGCCTCCTTCTCTCAGTGCCCTGTGATCTGTGTTCATTGGTTAGGTCTCTACCACATAGGCTAAGGACTTCCTGACAGTCAGAGAGACCACATCTGAATGAAAACAGACAAGAATGTCTGCTTTGTGATATATCCCATTCCAGCCTGAATTTGTCGCTAGCTCTCAAGAATCTCAATATATGAAAAATGGGGCTTATCTGATTAAAGCTCAGGTGGACAGGTCCTTTTAATAAAGAAACATCTGGTATCATCAGTCTCTCAGTGGCATTTAAAAGCAAAGGTAACATGAAGTCAGCCGACGTACAGCCTCTCTTAATCCCCCCCTCCCTAACACTAAGGGAGGGAGAACTCGCAAATCACACAAAGCTGTCTCTAGCCTGAATCTTATTCAGTCTGACAAAGCTTCCTGCCTAAAAAGAGATCGTGTAAACTGCCTGTGGTACACAATTATGTCTCCAGTCACTGAATCATATCCCTTTTCTTACATTCACCTCTGAACCACCTGTTTCCCCAGCCTCAGACACTGGGCATTTCTGGATGGATAGCTACAGTTATGGGAAAAGGCTGTAACTGTCAAATAGGAGAACTCCAACAAAAACTCAGACGCAAGAGAGACACTGGAGCTGACCAAACAGGATGTGTCATGGGTATGGATGATGTTGAATGGAAAAAAGTTTGTAAGTGCTCTGTGGTTGCCCTAATGTATAATCACTGCCATTTAAGAGGGAGAGTATACTT EMBV3_42250 TCCTTGCCATGCAACACGAGGAGCTCACAAATGAAGACCTGATGGAACTTGAGGCCCAGA Gene GeneID:515857|LOC515857:XM_002695454:114_cdna Constitutive 0 NULL GeneID:515857 18 GENE LOC515857 NULL similar to jerky homolog-like EMBV3_31587 CGTGATCCGGAAGAACACGGCCAGCCAGGTGTATGAGATGGTGCTGACCTATGACGTGGT Gene GeneID:281515|TBCD:NM_174194:21_cdna Constitutive 0 NULL GeneID:281515 19 GENE TBCD NULL tubulin folding cofactor D EMBV3_29660 CAACACTTTTATTAACGAAGGTAAACATGGACAGAACACACTGCCACTTCTGGGAAGAAT Gene GeneID:541172|ZDHHC17:XM_002687172:117_cdna Constitutive 0 NULL GeneID:541172 5 GENE ZDHHC17 NULL zinc finger, DHHC-type containing 17 EMBV3_02284 AGATGCAGATTTAACCATTTTCATAGTTGGTCCCTGGAGGTATGCAGAGTGCCCGCGTGC Gene BVV0102_108189 + 0 NULL GK000015.2:54406881-54418551 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059604 TCONS_00059610 TCONS_00059605 TCONS_00059608 1 XLOC_036465 Coding TCONS_00059604 XLOC_036465 Coding Coding PPME1 15:54357746-54409268 j TSS44704 2360 1 TCONS_00059604_4 334 14 0.954465169542517 0.0124876869035237 0.0119791988113719 0.0131371068498714 0.0106035136764868 0.0122874732428903 0.00336319661229911 0.00472607512569539 0.00860901828194138 0.00846966347224408 0.000464872242304871 0.00119728695455091 0.000192536780153034 0.00135089964146534 0.00107926034390112 0.0023070958804614 0.000914483722663194 2.63342645355174e-71 0.000158906778803354 0.00708488755591145 0.0094443599914838 0.00312665235848537 0.000228405677723995 0.00017511368784927 0.000270451252472329 0.0121741823899091 0.00689236480713418 0.00493256784907581 5.18184203279085e-09 6.1109091591808e-05 0.000318882398754167 XM_005216225.1 PPME1 PREDICTED: Bos taurus protein phosphatase methylesterase 1 (PPME1), 0.0 4082 100.00 0.958474576271186 NM_016147.2 PPME1 Homo sapiens protein phosphatase methylesterase 1 (PPME1), 0.0 3014 89.82 0.958474576271186 TCONS_00059604_4 sp|Q8BVQ5|PPME1_MOUSE PPME1_MOUSE Protein phosphatase methylesterase 1; 0.0 686 98.80 0.997005988023952 3 coding 0 0 0 0 -3.7299017555578 0.00754812794733478 -1.10243195383707 0.000994907642688886 ATGCGCTCTTTGAGGACTCCATTGCCCAGGCCCTGGAAGAAAGCGGGACTTTTCTCCTGTTCCTTGGAGTCAGTACTTTGAGTCCATGGAAGATGTAGAAGTAGAGAATGAAACTGGCAAGGATACTTTTCGAGTTTACAAGAGTGGTTCAGAAGGTCCAGTCCTACTCCTTCTGCATGGAGGAGGCCATTCTGCCCTTTCCTGGGCTGTGTTCACGGCAGCAATCATTAGTAGAGTTCAATGTAGGATTGTGGCTTTGGATCTTCGAGGTCATGGTGAAACAAAAGTCAGGAATTCTGAAGACCTGTCTGCAGAAACAATGGCAAAAGATGTTGGCAATGTGGTTGAAGCCATGTATGGGGACCTCCCTCCTCCAATTATGCTCATTGGACATAGCATGGGCGGTGCTATTGCAGTCCACACAGCATCGTCGAACCTGGTGCCAAGCCTCTTGGGTCTGTGCATGATTGATGTTGTGGAAGGTACAGCCATGGATGCACTTAATAGCATGCAGAATTTCTTACGTGGTCGTCCTAAAACCTTCAAGTCTCTGGAGAATGCCATTGAATGGAGTGTGAAGAGTGGCCAGATTCGAAATCTGGAGTCTGCCCGTGTCTCAATGGTTGGCCAAGTCAAACAGTGTGAAGGAATTACAAGTCCAGAAGGCTCAAAATCTATAGTGGAAGGAATCATAGAGGAAGAAGAAGAAGACGAAGAAGGAAGTGAGTCAGTAAACAAGAGGAAAAAGGAAGATGACATGGAGACCAAGAAAGACCATCCATACACTTGGAGAATTGAACTGGCAAAAACAGAAAAATACTGGGATGGCTGGTTCCGAGGCTTATCCAATCTCTTTCTTAGTTGTCCTATTCCTAAATTGCTGCTCCTGGCTGGTGTTGATAGATTGGATAAAGATCTGACTATTGGCCAAATGCAAGGGAAGTTCCAGATGCAGGTCCTGCCCCAGTGTGGCCACGCAGTCCATGAGGATGCTCCAGACAAGGTAGCTGAAGCTGTTGCCACTTTCCTGATTCGGCACAGGTTTGCAGAGCCTATCGGTGGATTCCAGTGTGTGTTTCCTGGCTGTTAGTGACCTGCTCTCCTTCCCTCCCTCAACATTGAGCTCTGTTGTAAATACATCGCACCAGAGGCCACTGTGATGCCGCTGTCTCCTCCTCACCATCCCGCCCGACCATGTGACACCGGCTCCCTGTAGACGGGCATCCCCAGATGTACAAACCCTTTTGTGTATTCCTGCCCAAAGCATTGTTTTCCAGGGCCTTCGATCAACATTGGTCTCCCCAGTCTAAGGCTCCCCAGCTCCTCTCCCTTCCCTGTTCAGGGATAGCTCTTGCCTGTCCTCCCTGCCTTGCCTTGGGTGAAGCCTCCATCAGAACCGCCACCCTGGGCCCCTGTTCCTGGCATTAGGTAATGTACCTGGGTCCCCATGTTTCCCCAGGTACAGGGACCTCCATTGCTTGAGATTGTTCTTGCCATGGTCCTGCCCTACCTCATGGGCTAGACCATGTGCAAGATGGTCTTTATTTTTCCCTTTTAAATAAAACACCAGTCGGATACCTTTTTATCCCCGTCTTATTCTTCTAGGCTTGGAAGACCCAGAGAGGTCAGGATCTCATCCTTAGGTAGAGGGAGGGGTGGTGGATAGCATCACAAGAAACTAGCCTGAAAATCAGGCTCAGCCAGTCCAAGCACATGGCCTCCCATCTGGGGAGGGCCCACGTCCCACTCCCACATGTCTGGGCACCTGCCCTGGGCTGAGGCCAGGCTGCTCCAGGGGCCTCTTGAGCCCTCACCTGCCATAAAGCAACCCAGGTTGACTACAGCCCATGCACAAAGCCACCGGCTAAGGCCCGTGGAGTTGTTTTTAAGAAGCAGATTTAACCATTTTCATAGTTGGTCCCTGGAGGTATGCAGAGTGCCCGCTTGCCTTTTCTAGACCCACAGCTTATCTTAGTCATTTGTGGTTTCCATGTCACCCTTCATAGAAACAGTCCAGTCCAGCATCCTCAACATTTGCCCTCTTCCAGCTGCCTCATCACAGCACTTCAGCCTCCCTACTGCCCAGGCACGCCATTTCCAAGGGTAGGGAGAGGCAGTCTCCTGCAGCCCATCTTTTCTGTGACTGTCTTAGGTGATGCGTAGCCCCCTCCACCTTTTGACCCCTCAACTTCCTATCCCTGTCCTGCTTCAGGGTCCGAAGTCTGGGACCTTCTTTGTTTCTTTGTTATTTATGACCTTGTTTAAAGAAAATAAATATCTCCCAACCTTTATCTGGTCTTTCTCTATGGAGTTGTCCTTATTTCTTCTGATCTAGGGGTTGGGGACAGTTCATTGGATTT EMBV3_08533 AACAGGCCGGCCTTGTGGTAAAACTGCTGATGAAGCTAAATGGACAGTTAATGCCCATGG Gene GeneID:407996|KRIT1:NM_001001166:4_cdna Constitutive 0 NULL GeneID:407996 4 GENE KRIT1 CCM1 KRIT1, ankyrin repeat containing EMBV3_27210 CGATATGTCGGAGGAGATGCAACAGGACTCGGTGGAGTGTGCTACTCAGGCATTGGAAAA Gene GeneID:784058|LOC784058:XR_084699:22_cdna Constitutive 0 NULL GeneID:784058 6 PSEUDO LOC784058 NULL similar to dynein light chain 1 EMBV3_19431 GCCGGCAACACCCCCGTGTCACCCCTATGTTCCATTTAGTTTCATATAAGTGTCCATTGC Gene BVT0102_075701 - 1 EMBV3_31199 GK000012.2:31952373-32082250 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12895 TTATCCGATGGTTCGAAGATGAAAGCTATTTCATTTGTGTCAGCATGTCTCAGAGTGACC Gene BVT0102_008363 + 1 EMBV3_38875 GK000014.2:69317103-69930850 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053788 TCONS_00053790 TCONS_00053794 TCONS_00053789 TCONS_00053793 TCONS_00053786 TCONS_00053795 TCONS_00053792 TCONS_00053787 TCONS_00053791 1 XLOC_031825 Coding TCONS_00053788 XLOC_031825 Coding Coding SDC2 14:69928535-69961008 j TSS39613 3520 1 TCONS_00053788_2 173 5 0.891752894801675 0.00111306218221337 0.000672950640475889 0.0010416502454789 0.000566398368499591 0.000199650708984387 0.000110590919217744 0.000931602453326548 0.000865811512562752 0.000208353055503171 6.3396003325465e-08 4.01620051339102e-21 2.28064564485467e-05 0.000174802774032996 2.57923319496909e-08 0.000711690838672683 3.75403188275787e-44 1.87199697147438e-28 4.33607040842698e-47 0.000968359703882807 0.000897833529723805 0.000239269193025501 2.52987157082666e-48 5.92214775164645e-42 3.78694234236407e-25 0.00107979265361275 0.000644195982970488 0.000537598459207076 5.68992364011754e-34 5.12483333412189e-14 9.96541524622978e-57 NM_001034788.2 SDC2 Bos taurus syndecan 2 (SDC2), mRNA. 0.0 1121 99.84 0.176988636363636 NM_002998.3 SDC2 Homo sapiens syndecan 2 (SDC2), mRNA. 0.0 3452 87.33 0.804261363636364 TCONS_00053788_2 sp|Q58DD4|SDC2_BOVIN SDC2_BOVIN Syndecan-2; 4e-124 352 100.00 0.994219653179191 1 coding 0 0 0 0 0.0252737768971271 0.805143245380364 0.0113613824137576 0.833131455052341 ATGAGAAAAGGCTATTAGGTGAGGGGGTGTCGGAGTGCATGCCAAAGAGGTTACCGTGGCAGCTGCAATCATTCAGCCGAATTCCTCAGCCTCCAAAGCAAGAGAGGCAAGAAGCAAGTGACTTTTCTACCAGTGGTGTGTAAAGCAGCCGGAAAAGAGAGATGAAAGTCAGTCTCTGTTCCAAAGCATTGGCTAAAGGCAGGGATGTTCAGGCCAAGTAAGGAGGCATAGAAATGGATAGCCCCCAGTTTCCACACCCCCAACTGCTGCCTGGAGGCTGGTGAGGAGTGGACACGTCTTTACACCGAGCACAAGGAGCGAGCTCTAATCATGCTGCCCGCTGGTGTCGTCCCAGTTAAATAATAAACTCCACTCTGTGGGCAGAGGCGCTGTGTGGTGGCAGGGTGCCTGGAGCAGTCACATCTATCCGAAACTGGTCCCATCTTGAACGGCTGTGACAGGACCAAAGTGAGAGACCGTGAATGTGGGCTGGGCTCCCCGGTCTTTACCTCTCAGTAAGACCTGTGCTCTTTCAGAAATGAAGATGTAACAAGCAGCCCTGGGTGGCTGTCATCTGAAAAGCGGGCAGAGCTGACATCTGATAAAGACATGTACCTTGACAACAACTCCATTGAAGAAGCTTCAGGAGTGTATCCTATTGACGATGACGACTACGCGTCTGCATCAGGCTCGGGAGCTGGTGAGGATGGAGAGAGTCCAGAGCTGACCACGTCTCGGCCCATTCCAAAGATACCATTCACTAGTACTGCTCCAAGAGTGGAAACCACAACGCTGAGCAAGATACAGGACAAGATCCCTGCTCAGACAAAGTCACCTGAAGAAATTGATAAGGAAAAAGTTCACCTCCCTGACTCAGAAAGGAAAACGGACCCAGCTGAAGAGGACACAAACGTATATACTGAGAAGCACTCAGACAATCTGTTTAAACGAACAGAAGTCCTGGCAGCTGTCATTGCTGGCGGAGTTATTGGCTTTCTCTTTGCAATTTTCCTCATCCTGCTGTTGGTGTATCGCATGAGAAAGAAGGATGAAGGAAGTTATGACCTTGGAGAACGCAAACCATCCAGTGCTGCTTATCAGAAGGCACCTACTAAGGAGTTTTATGCGTGAAAACTCCCATTTAGTGTCTCTATTTATGAGATCACTGAACTTTTAAAAATAAAGCTTTTGCATAGAATAATGAAGATCTTTGTTTTTTGTTTTTTGTTTTTTTTTCATTAAAGAGCCATTCTGGCACTTTAATGATAAAAATCCCATTGTATTTAAATCTTTTCATGTATTTCTTTAGAACAACATAAAATTCAAACTTAACATTGCAGTGTTCTGTGAATAGCAGTGGCAAAATATTATGTTATAAAAACGCTCAATGTATATGGAATCGGTTTAAATTTCTATGCGCAAATATGAAAAGAGTGTTTTTATCCGATGGTTCGAAGATGAAAGCTATTTCATTTGTGTCAGCATGTCTCAGAGTGACCTTATCAAGTTGGTCTTACTTTGTTAATTTATCTGTTGTTCCCCTCTCCTCTGCTCGCCCTTGGAAACAAAACAAAACTCTATGCCTTTTGTAGCTGTTACGGTGCAATTTGTCTTTGGGTAATTCAGATAATGGTAATTTAGTGTATATGTGATTTTCAAATATGTAAACTTTAACCTTCACTTTGTATAAATTTTTAAGTGTCAGACTATCCATTTTACACTTGCTTTATTTTTCATTACCTGTAGCTTCAGGCAGATTTGCAACAGCAAATTAATGTGTAAAATTGGATTATCACCACAAAACTGTTTAGTCATGTCTATCCATTCAGATCTTCTTTTGAGAGGATTTGATGTGAGTTTTTGACAAGCCTCAGCAAACCCAAAGATGCTAACAGTATTTTGAGAAGTTGCTGCAGATTCCTTTGGCCACTGTATTTGCTAATTTCTTGCAATTTGAAGGTACGAGTAGGGACTTAAGAAAAAATCAGTTTTTGTTCTTACAAATGCATTTAAGTTGTAAACGTCTTTTTAAGCCTTTGAAGTGCCTATGATTCTATGTAACTCGTTGCAGACTGGTGTTAATGAGTATATATAACAGTTAAAAAAAAAGTTGGTATTTTATAAGCACAGACAATTCTAATGGTAACTTTTGTAGTCTTACGAATAGACGTAAATTGTAATTTGGGAATATAAAAACTACTGAATAAATCATGTGGCCTAATATTGAAAATGTCACTGTTATAAATTTTGTACATTTTCGATCAAATGTACACCTCCCCTTTGCTAACAACCGTCTGCTCTCAAGGATGTTGTGGGTTTGATTTCTGAGTGTTCCACGGTGTCTGTAAATCAAAACCAAAGAGCTCATTTGATGAAGCTGTTTATTATCAGATTCGCTTCTGAATTGGCCAGAGGAAATCTGAATGTATCATCCTGTGTGTGTTTGGATATAGATATTGGAAGGCTCCCAGGGAGGGAATTGTGAGTTTCACAACCTTTATAAAGATAGCTCAATATTGATGGCAATATTGAGATGGATACCTGCTCTGACAAATAACTTTTAGGACTATGATTTCCAAAGAACTAAAGAGGGCTTTCCTGATGTCGGTATCTATGGTTTAGTCCTCTGGATTGTTTTACCTTTGAAACTGTGCTCCAAATCTCTCCTGAAGTTTAACTGAAGAAGTAATAGATGGAATACCATAGTTCACACTATGGGGAAGAAGAGTCCCTCAGGGAGGTTCTAGGCGTTAAAAGGAGGGCTTCACTGCTTAGGAATGAGGTTGCCAGAGAGCAGTGATGCCTGAGGAAGAGATGGAAATGTGAGGGTACCCTGGCGCCCTGGCTGGGGACTTCCTTCTAACTGAACATTTCCTTTTTCTGTTTTACCACCAATTTTGTTTTAAAGTGTGAACGGCCAAAGTAGGAAGAAGACAGGAAAAACAGCAACCTTTCCAACATATAATTTGCTTTTAACGAAGTATGAATACTTGCTTCATTTAGAGGACATTCCCTGGAATTGCCACAGATTTCAAAAAAAAAAATTGATGCAGCACTCAGAACAGTGTTTACTTAAATTCTTAATGGCCTTAATTCTCAAAGTCCTGTCCCATCACTTACAGAATCAGTCTACTGCAGAGTGATTGAAAGAAGTGCAAGCACTTTCTAAAGCTGCACAATGTCCCTCGGTTATGGAGGTTATGAGTGTAGTGGGTATACCTCTAACTGTGCAAAGCATAGCAAAGTTCAGTTCGTAGAATATTAACTGCTTGGAATATTCATGCCAGGAAAAGGAAATTTCTGGCAAATATTTTGTCACTGCTGTAAAGCAAAATATTTGTTAAAGTGCCAAAATAAAGTCTGTCATGCTGAAAGTAAAAAATCATTGTATAGACTGACATCCAGTTTTCTTCAACTCTACGTTTTCTGCTCAGTTTTTTTTTGTTTGTTTGTTTTTAAAGATTCAGTAAATACTACTATGAAAAGTGTTAGTAATGATTACCAAGTTCAGGAAAATTTT EMBV3_19987 GAAGAGCTCAGGGACAGGGAATCAAGAGTTCTAGTTTAGACGATTCAAGGTGAAACCCTG Gene BVT0102_352409 - 1 EMBV3_09464 GK000018.2:51395574-51472709 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03548 GGACCCGCCGAGTAACGGCTCCTCTGGCCTAGAAACAGACCTGGACCATTTGTTACCTAA Gene GeneID:781253|LOC781253:XM_002692744:62_cdna Constitutive 0 NULL GeneID:781253 14 GENE LOC781253 NULL hypothetical LOC781253 EMBV3_41783 GTACTGCTGATCCACCAGGGAAGCCTGAGTCAGAAGTATGTTGACCCCTTCTTATTGAAC Gene BVV0102_331446 + 0 NULL GK000004.2:12520271-12597837 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185987 1 XLOC_112040 NonCoding TCONS_00185987 XLOC_112040 NonCoding NonCoding - 4:12530427-12530763 - TSS138355 336 1 TCONS_00185987_1 71 0.630952380952381 1 0 0 0 0 0 0 0 0 0 0 2.44910192987616e-05 0 0.000127703065319473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 2e-49 199 81.86 0.598214285714286 0 noncoding 0 0 0 0 GCAAGGTTAACTCATGATACAAATTGGTTCTGAGACAATATAGACAGTCTGTCAGTGCTCAGATGTGTCCAACTCTTTGCGACCCTATAGACTGTAGCCCACCAGGCTCCTCTGACCATGGGATTTCGCAGGCAAGAATACTGAGGTCGGTTGCTATTTCCTTCTGCAGGGGACCTTCCCAACACAGGGATCAAACCTGTGTTTCCTGCATCTTCTCCATTGTAGGTGGATACTGTACTGCTGATCCACCAGGGAAGCCTGAGTCAGAAGTATGTTGACCCCTTCTTATTGAACTCAAATGGGGTAGACATGATTTGAAGAAGGATTTTCTTTATG TCONS_00183223 . 5' 10073 TCONS_00183223 . 5' 10073 EMBV3_19382 CTATGCATGTGCCAAAAAGGAGCCTATGTTTCCAGGATGACTGCGGAACCAAGAGGGTTC Gene BVT0102_211321 + 0 NULL GK000017.2:25495148-28163084 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245572 TCONS_00248129 TCONS_00248131 TCONS_00248128 TCONS_00248130 TCONS_00248132 2 XLOC_150761 XLOC_151495 NonCoding TCONS_00248132 XLOC_151495 NonCoding NonCoding LOC618701 X:118860352-118983665 x TSS185627 2567 1 TCONS_00248132_4 96 0.386443319049474 3 0.979207214220838 0.00245402098818276 0.00179118698798697 0.00198217491272245 0.00235276477080833 0.00233562076546727 0.000953366517315163 0.00140359255147882 0.000858483829110986 0.00162414178232679 0.000178159124467136 6.47741399723293e-06 5.61703834923691e-05 0.000548598435096265 0.000290775935138493 0.000506133282502728 0 4.4804150411562e-12 0 0.00240981102312823 0.0020490993058076 0.000620903974089186 0 0 1.77783062199284e-09 0.00171959400417191 0.00261316218803582 7.68412164168464e-05 0 5.71155271343183e-10 1.71368781005491e-05 XM_005197659.1 LOC101904654 PREDICTED: Bos taurus uncharacterized LOC101904654 (LOC101904654), 3e-44 185 75.54 0.105570705103233 XM_005255919.1 HAS3 PREDICTED: Homo sapiens hyaluronan synthase 3 (HAS3), transcript 2e-28 132 71.79 0.0970003895597974 0 noncoding 1 1 0 1 -0.119980647982621 0.378237282551263 0.0601697306906847 0.225529886193396 CTCTTGGTTCTGCAGTCATCCTGGAAACACAGGCTCCTGGATTGGAGAGAGATCTGAAACCTTGCCTCCTGCATTGGTTGGCCTTGCAGTAAAGCTCTTTTCTCTAAAGCTCTTGCATTAAGTATTGACTTCTCTGAGCATCGGGCTTGAGCCCATGTTCCGTGAGTTTGGGCGGCCTTGCTGAGGTTTAGGACTTGTGACCATCTGCTTGATGCACTGTAGCCCCTGGTGGGCCCTCAACACCAACCCTGAGTGGCCACCTATACTGAGTTTGTCTAGAGAGTTGGCTCTCGGGTTCCTGTTTCCTAGCCATGGCACTCTGGGCTCCTCTGGCTTCTGGGGCTCCTTTCACTTTTAAGGAAGGAAACAGCTCCTGGATCAGACATCTTTGGGAGAGGAACAAAGTGCTCTGAGCCACAGATAGAGAAGCCCTGAAGGCTTTCCTACAGCTCCCACGAATGCAAGGGCTTTCCAGGGAGACATCAAGTTCCTGATAAAGAGTTCTGGTTGACAACGACTTCAATCCATGAAGGCTGGGAAGAGGCAGCATGCATTGGTTAAAGACAGTAGGTCCAGGCTCTGTTTGCTGGCCAAAAGGTAAACTATTTTGAGCACCACAGTGGAAGAAATTGATCAGTCAACTGCAGAGCTCAGTTTGGGCTGAGGAGTGGCCAGGAAGAGCCAAGACAGATGACCCAATAGTAATAAATTCCATCCAGGCACCAAAACGCCAAACTTCAAGCAATAGCCGGAAAAGAGACATGTGAAGGAAACAAAGCCTCTGATAATCACCTTTCTTAAATACCAATTAATCCAACCTTGTCAGTGCTTATGTAACACTCCAGTCCTTGTGGTACAAAACTCTGGGACCTGGGATTATCATTTTCTACAGAATTTGAGACTCATTAACCAAATTGAGGATGATTTCCCACAAGCTTGAAGAATGTACAAAGAGAAATGGGAGGATTGAAGCATAAAGCATTGACCAGTTTAAAGTGGTTTTGCCTCCTTAAAACAGGTTGTTGAATAATCAAACCTTGAGTTATTTATAGAGGCAGCACTATGCATGTGCCAAAAAGGAGCCTATGTTTCCAGGATGACTGCAGAACCAAGAGGGTTCAGTCTGTGGAACTCTCAGAGTAGGAATGTGGCCAGGGGAGAACTTTATGAAGTCCTTCAATGTGGAAAATCTGGCTTCTAGCAGCATGAATAGCTTACATGAACTAATTCAAGACTAGCCAATTAGCTTCCAAGTTTGCGGTTCCCCTAAACCCTTTCATTTTACTTCAAACTCTGGATTGAGGAGACAGATTTGAGAGCCCTACTTCTGTCTTCTTGCTAGTCCACCTTGGATTAAAGTTTGTCTCTCAAAAGCCCATTCCATAGTTTGGCTTCTATGTGCATCAGGCAGTGAGCCCTCGCTGGGGAACACTAGTGCCTGATAGGCCTGGAGTTAGATTCCTCTCTGAATTCCTCTAGATCTGACGCTGTTATACTCTTCTTGCTCTAAAGCAGAACTTGTGTTCCTTAACACTCAAATGTATCCTGGGATAAAAGTAAGGACTCTGGATATATTCCAATACACTTCTTTAGGCACAAAGCGTTGAAGGCTACATCAATAAATGACAGGAATAAAGAAGAGAAACAGATGATAGGGACCATAAGATCGTCTCTCTGTGCAGTGTCAGATAACCTCATTCAGAATAGCACAAAACCATCTTGGATGGCTTTTTTCCTTTAGAATTGTACTCATATCTCAAATATAGTGACTTGGGTTCTAGATCACTGATATAAAGTGAAAATTGCCATAGATAAATCATTAGGAATTTGGGGGATTCCTAGTGCTTATAAAAGTTGTTAAGCCTATTGTACACTTACTAGAAGATGTCTAAAAAAATGCACATAGCTTAATTTACAAATGTAAGACAGTTACAATAGTAACAAAGACAACTGATGAGGGCACCAGAAGAAATGAAATAAGGAAAGAGTTTAAAATATTTAAAGAATTAACAATATGTGGAACAGGGACCCCAAGTGAATACATGATGTTGGGAAATGATGCCATAGACGTGTTTAATGCATGGTTACCATAAACTTTCAGTTTGTAACAAAACACAGTATTTGTGACACATGATTACGTGCAGTACAATGTTTGAAAAGTATGCCTGTCAATCAATTAAAACAAGTCGTGAAAAGAGACTGACTCTGGCTTTTGAAAAGGACGGAGCAGCATTTTTCTCTGGGAGGACACCCCATTTTGCCCCCTGCCTTCTGTGTTATTTTCCCCATCTCAGGTCAAGTCTGGGACATGAAACTGTAAGGTTTGCATTAGGGACACTGCTGAAGAGTTTGCCGGAATGTGGTGCTCCCCAGGAATCCTTTAATCCAAGAGATAGACAAAATTTGGGCTCCCATAGGTGAGGACTGGAGAGACAAGCACCGTAAAATACAGGTCATTCAGAGACCTCCCAAACTTGCTCTCAGGCCTAGAATGCCCAGACAGGACATTCCATCTTATAAGCCTTGTAGCTCTCTGTGAGGTCAAAGTCTCAGTCTAAGAAGAATGG TCONS_00245585 r 3' 15225 TCONS_00248134 s 3' 11215 EMBV3_07032 ACCCTATCCTTATGAGTTGGCAGATGTGTGGAAAATTGGGAGCCCTCTGTGGGATTGGTG Gene GeneID:781998|LOC781998:XM_002685943:113_cdna Constitutive 0 NULL GeneID:781998 3 GENE LOC781998 NULL similar to olfactory receptor, family 10, subfamily R, member 2 EMBV3_15931 TCCAAACAGTTAAGAGTCAGAGTGGGTAAGGACTTCCGTGGTGGTCCAGTGGCCAAGACT Gene GeneID:615953|CENPM:NM_001038686:204_cdna Constitutive 1 NULL GeneID:615953 5 GENE CENPM MGC134606 centromere protein M EMBV3_00021 GATCAAGAGCCCAGGACCCCGTTTATCCTCCTGTTGGGTGAAAAAGCCGATTTGAGCGTA Gene BVT0102_039336 + 0 NULL GK000025.2:29500386-30043770 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145120 TCONS_00145131 TCONS_00145124 TCONS_00145127 TCONS_00145121 TCONS_00145130 TCONS_00145126 TCONS_00145125 TCONS_00145122 TCONS_00145123 TCONS_00145129 TCONS_00145128 1 XLOC_088736 Coding TCONS_00145125 XLOC_088736 NonCoding Coding - 25:29999594-30013487 - TSS108825 842 1 TCONS_00145125_2 110 0.235154394299287 3 0.939605528361647 0.0174128495058326 0.00552071728617417 0.0099653046482355 0.00147356768808128 0.00126279858382005 0.000746923414622292 0.00546147800453223 0.00394716517375818 0.00335828770726877 0.00173739675769033 9.23934152037051e-05 5.81559942855251e-06 7.36965636915855e-05 0.000986904688557354 0.000445896109472987 0 0 0 0.00655074747237358 0.00528443189919936 0.00278854060703033 0 0 0 0.00812880903407882 0.0124774773347125 0.0104590694900446 6.84454960382414e-05 2.91931720525981e-145 1.42808295335502e-05 0 noncoding 1 0 1 1 -0.677675889093656 0.0315844775603607 -0.0357978847907786 0.514104577651752 ACAGAGCTTCTGTTGCTCTGAGGTGAAAAGGTCGCTGAGCTGACATTCAAGCATGCCCAGTTAGAGGGACGGATGTCCTGGCCAGTCTTAACCAGCTCGAAGCTCTAAGTAGATGCAACTGACTTCCAAGTTTCAAGAGATCAATGCAGGCAAACATCTTACTGTTTAGGTTCTGTGCGGCGTGGAGCACCTGCAAGTCTTTCGTAGCAACAGGAGGGAGGTGGTCACGATCAGAAGGATGGAGCTACTTCCCCAAATCTAAAACGGGATCAAGAGCCCAGGACCCCGTTTATCCTCCTGTTGGGTGAAAAAGCCGATTTGAGCATATCCAGGAATCAGCGGACCCTCCGGTGGCCACCACCGGCCGCCTCCTTGTTCCGTGTCTGTCTCCAGCCACCTAAGGACCAGCCTCAGCAGCTTTGTGTGAAGTTCCAGCTCACTGCCTCCTCTCTGTCCGAGCTCATGGAGTCTCAGAGTTTCAACCACCACCTGCCTGGACGCACGTGTCTGAGAACCTGCCTTTCTGGTCCAGCGCTCTCGCCTGCACGCTTGATCATGTATCTACCTGCCTCCAGGACTTTGCTCTCCAGGTGCTCCAGAGGCCAGCCAGTCAGACACGACACATCCGAAATGGAAGTCCTCCCCTCCCACCCCGTCCCCCAGCTCCCACTGCGTGCCCCCATCTCTGCGGTCAGCACTGCCGTATCCCTCCCCAGTCATCCTGGACTCCCCTTGTCCTCTTACTATCTGTTGTGTGTTGAATTCTGTTCACCAAAAAAGGAGTTGAAATCCTAAGTCCTTGATAGGAAATAGGGTTTTTGCAGATACATTAAAGTGAAGTC TCONS_00146806 TCONS_00146807 TCONS_00146808 TCONS_00146809 TCONS_00146810 TCONS_00146811 TCONS_00146812 TCONS_00146813 r 3' 30283 TCONS_00146806 TCONS_00146807 TCONS_00146808 TCONS_00146809 TCONS_00146810 TCONS_00146811 TCONS_00146812 TCONS_00146813 r 3' 44175 EMBV3_38928 TTCTACGAGAAGCGTATGGCCACAGAAGTTGCTGCTGACGCTCTGGGTGAAGAATGGAAG Gene GeneID:781565|LOC781565:XR_083584:54_cdna Constitutive 0 NULL GeneID:781565 1 PSEUDO LOC781565 NULL similar to ribosomal protein S6-like EMBV3_20606 CCCAGCTATCCGTTTCACCAACAATTCTTACACCAAATGCTAAGCGTAAACTGCCGGTAG Gene GeneID:617811|ARHGAP11A:XM_002690782:574_cdna Constitutive 0 NULL GeneID:617811 10 GENE ARHGAP11A NULL Rho GTPase activating protein 11A EMBV3_10107 GAGGCGAACCACATCTTCGAGTTGATGCAGTGCCGAAGATTGTAATATTAGGTCCACCTG Variant GeneID:615606|LOC615606:XM_002691652:380_cdna 103^187 3 EMBV3_25483 GeneID:615606 11 GENE LOC615606 NULL similar to Putative adenylate kinase-like protein C9orf98 homolog EMBV3_21006 GGTGCTACTGGTAAATAACCCACATACCAATGCAAGAAATACAGGTTAAGTCCTGGGATG Gene BVV0102_220266 + 1 EMBV3_36875 GK000005.2:37328200-37433923 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36517 CACACATCCATTTCCATGCCTCCTTGTGTGTGGACTATTGCTGGTGGGTGGATCCTAGTT Gene GeneID:504649|SNX19:XM_002699253:281_cdna Constitutive 0 NULL GeneID:504649 29 GENE SNX19 NULL sorting nexin 19 EMBV3_10409 CTCAGGCCACTGGGGGCTTGCCTGTCAGATGCCGCTTGGGTTAAATACTTCTAGAGAATA Gene BVT0102_024535 + 0 NULL GK000026.2:39930997-39976324 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152376 TCONS_00152377 TCONS_00152379 TCONS_00152374 TCONS_00152373 TCONS_00152375 TCONS_00152378 1 XLOC_092323 Coding TCONS_00152373 XLOC_092323 Coding Coding RGS10 26:39973823-39977616 j TSS113659 3262 3 TCONS_00152373_6 108 0.139484978540773 2 0.140295358649789 0.000576191368854917 0.000173251771688703 0.00092884879420479 0.000902095319262438 0.000141355704975207 0.00029926473713328 0.000300195952637045 0.000355548207171072 0.000739329320898104 6.55488836027106e-05 6.04619204979408e-14 1.73192450636906e-05 4.11860066659234e-05 9.83255234002575e-05 2.29647243211929e-05 1.92165122486259e-13 0 9.52775637200061e-14 0.00170687124482585 0.00195505546881933 0.000291008492879102 1.04706208497344e-13 0 3.68089340398906e-13 0.000593456758223706 0.000372727095868699 0.000573752213993681 7.12839170401121e-14 0 3.52020306552285e-16 XM_005225791.1 RGS10 PREDICTED: Bos taurus regulator of G-protein signaling 10 (RGS10), 0.0 825 100.00 0.13979153893317 NM_002925.3 RGS10 Homo sapiens regulator of G-protein signaling 10 (RGS10), 1e-114 419 80.93 0.1364193746168 TCONS_00152373_1 sp|Q2KHW7|RGS10_BOVIN RGS10_BOVIN Regulator of G-protein signaling 10; 6e-29 105 83.61 0.72289156626506 0 coding 0 0 0 0 -2.6999683688959 0.00749008656015313 -0.102577189534211 0.0610310257832005 TGCAGCAGGCGGCAGTCCTCTAATCCGTCGGGGGTCCTCCCCTAGCAGCTGGCGAGTGTGCATTAGAATGACTGCTTTCCCAGAGAGGCGCTCCTGGGCCTGTGTGAGCGAGCAGGTGTCTGCATCCGGCAGCTGACTGCTATTTTCTTTAATTAGGGCCTGTTCCCAAAGCCCCTCCTGCCTGAGCTTGTCATTCCACTTCTCTGCCCCGCACTGAATAAGCCCCATTTTGTTTCTTGGTGTAATAATAGGTTTGTGTAAGACCTTGGTTGCCAGACTTCCGGGGGTCTAAATATTAGCATTGTCTGATATGATAGTGGCCTTTATTTCATCGTCTCTACGGATATGGCTTCTCTTCTGCTACCTCAAGGTCCCGGAGACCCACACCCCTGTAATATCTAACCTGAATACAGTGATCTTCAACCTCATGAAGTATGACAGTTACAGCCGCTTCTTAAAGTCTGACTTGTTCTTAAAACACAAGCGGACCGAGGAAGAGGACGAAGAGTCACCAGATGCCCAGACTGCAGCTAAAAGAGCTTCGAGAATTTATAACACATGAGCCCTCCAGGCGCCGGAAGGACTGGCAGCTTTCAGAATTGAAGGAACTCACTCTCAGGACCATGCAGGGTGCATAATGGCTTTGTTACCTGCAAGGACTGAAATGTACAAAAACCCTTCCATGGGATCTGTGTATTTTATTATCTGCTTGACCAGTAAGTTTTGCATGATGGCTAATCTTAGATAAAAAGACAAATAGCTTTGAAGTTTTAGTTCTGTCTCACACACAAAAATGAAATAGTCCTTATACACTGGACATCTTGAGTATTTTACAGCTTGATTAAAGTTCATGTGAGGCCTCCAGGTGAAACTTACAGCCACATCTTCCCTTTGACGTCTTCACCTTCCCTCCGTGGGTGGGTCGCTCGGGTCCACGGCTTCACCTGGTGAATCAGCTCGAGAATGAGTTGATCTAGCATGCTCAGGCCACTGGGGGCTTGTCTGTCAGATGCCGCTTGGGTTAAATACTTCTAGAGAATAAGTTCAGTGTTGGGAAAAGAAAATTCATTGCAGCCTCTAAAGATTCAGGGAGTTGCGTGTGAGTATCATCAGAGGGCTCTTATTTCTGAGGTTTGGGTTTGTCCTGGTTTTGCCCACAATCTGTGATGTTTCATGTAACACAGATAAATAGTTCATTTTGACAGAAACAAGATCCCAACCAGGAAGAAAGAAAACCGGGAGATTGTTCAGGGTCCCCATGGCGATGCAAGGTGGTGCTGAATGGGATGGTGATACCCAGCCCCTGCTGATGATGGAGGGTGGGGGATGTTCGCTCCTCTCACAGCCCATCTGGTGAAACCGTTTTTTCTTAGTGCCTACCCTTCGCTAGACTTCTTAACTCTGGGCTTGAGACTTCAACCAGAGGATGGAAATGCTCTTTGGAAGCCCCCTCTTGGGCTGGAGGCTGTGAGGTAAGCCCGATGGTCCCAGGCAGTCCTAGCCAGCCCAAGTTCCCCTCCAGCAGAGCCCAAGGTCAGGCACAGTTCCCTTCTGCTCACTGTTCCTGCCATCTGCTGCTGCCAGACCTTCTCCAGCATGTTTGCCAAACCTTAAACTTCTGTTTGTACAAACAAAGCAACTAGACTCTTACTTGAGAGCCTTCCAACTCAGACATTCCATTTGCAAAACTCCCTGCTGTTGAGTACAACTCTATGATTTATCAATCAAACCAGGACACTTGAGAGAGAAGGGCATTGAGTTAAATCATCACGCTGGGATAACAGGGCATCAGCTGGTTCTGTTCTGGGTGAAACCCATTTGCATAGTCGCCTTGCTGACCCCCCTCTCCTGGCATGACCACTTGGGCAGTCCCCCAGATTCTCATTGTCCCTTCACTGTGGTCAAATGCCCCCTGTCTTTCCTTTTTGGGTCTTAGGGAGCCATTGACTGCTTCCAACCGAACCACACAGCTGAAGCTCATCAGAAACAGTAAATACTTGATCTCTGCCCTGCCCCCACCCCCAGCTCCCAACAGGGGGTTAACTGCCTCCCCTAGGTCATCCCAGACAGGTTTTCTCTCTGCCTGGAATGAGATGGTCATCCTGAGAATGACACCCAAGGGCCCTGTCATCTGGAAAATTCAGTCCATCTTCAAGCAGAACAGACTGATGTACTTTTAAGAGTAAGGAATAAAAGAAAAAAGAAATAGGTTCTCTAGCTCAACTTACAGTTTAATAGCCAAAAACGTGCAGAGATACAGACCACCCCCCCAACCCCGGCCCTGCACCGTCACAGACAGGATAATTTCAAGACCCCGTGGAGCTGAGTGAGTGGCTTGTGTGCTATTGCCTCAGTTGCGTCTGACTCTTTGTGACACCATGGACTGTAGCCCATGGCTTCTCTATTCATGGACTTTCCCTGGCAAGAATACTGGAGTGAGTTGCCATTTCCTCCTCCAGGGGATCTTCCCGACCCAGGGATCAAACCCATGTCTCCTGCATTGCAGGCGAACTCTTTACCCACTGAGCCACCTGGGAAACCCTGATCCTCCTATTTGAGAGCCTGTTCCGGGCGGGTCCCAGAGACTGCAGATGGCTGGGAACCCTCTTTCCGGCTTTCACAATTTTACCCCTGGGTTCAGAGACCCTTTGAGGTGGTGATCTCTTCAGAAACACATAAAGGAAACAGCTAGAGTTAGCCGGAAGGCTGTCTGCCAAGAGAAGAGCTTCTTAAGAGCTGGTTGAAAAGCTCCCCAGTGGGAGGGGAAGCCGCTTACGTTTAACCACAGCTTACTCCCACCAGCATGTACTCACACCACCTCCCCCGGCTTGCTCCTGCCTGGCTGCCTACATCCCTTCCAAGTGCAAAACCAGGCGGGTACAGAATGCAGCTTCTTGGATCTGTTGCAACAGTGAGATGGAAGTGTAGGGCATGTGTGTCCCCAGATGATGCTTCCACACTCAGCTTTTCACTTTCCCCCATCCATTTATTGATTAGTACCTTAATTGCATCTGGGGCCTCCCTGGTGGCTCAGTGGTAAAAAAAAAAATATCCGCCTACTGAGGCAGGAGACACAGGTTCGATCTCTGATCTAGGAAGATCCCACATGCTGTGGAGCAACTAAGCCCGTGAGCCACAACTATTGAGTTTGTGCTCCAGAGCCCAAGAGCCTCAGCTACGGAAGCCTAGGCACCCTGGAGCCCATGCTGCACAATAGGAGAAGGCACTGCAATGAGAAATCTGTGCTCCACAGCTAGAGAGT EMBV3_20446 GCAATGACCTATTTAAGAGTAAACCCGCTCCACCTACGCCAATTCGGGGCTTATCCAAGC Gene GeneID:519634|MYO18A:XM_002695670:181_cdna Constitutive 0 NULL GeneID:519634 19 GENE MYO18A NULL myosin XVIIIA EMBV3_04662 CCCAACGTTCAAGGCTGAAAGTGAGTTCAAGGCTGCACCTGGGAAAATTTGACTGGTAAG Gene BVT0102_149684 + 0 NULL GK000019.2:49498634-49569374 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08309 AAGACATCCATCAGTGTGCACTTCTAACAGATTGGACCCCTTCAAATCCTGAGCCAATGT Variant GeneID:527479|AGBL3:XM_002686962:38_cdna 638^823 2 EMBV3_04064 GeneID:527479 4 GENE AGBL3 NULL ATP/GTP binding protein-like 3 EMBV3_04453 CCTGGGTAGGAGGCTTTGTCCACTCCATTGTCCAGCTGATTCTGATGCTCCCATTACCTT Gene GeneID:788723|LOC788723:XM_002695577:100_cdna Constitutive 0 NULL GeneID:788723 19 GENE LOC788723 NULL similar to olfactory receptor Olr1522 EMBV3_40487 AAGAGGTTCAAGGTCCTGCCTCCTACGTTCCCCACTACCATACGATGCTGTCTGTTGGAA Gene BVT0102_156538 + 0 NULL GK000011.2:28475776-28576238 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36965 CAGTCTGTGACCTTGCCCATGACCTTTCTAGTTGCTGGACCACATTCAAATCCCGAATAT Gene BVV0102_292880 + 0 NULL GK000018.2:29401237-29541552 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41527 AAAGCTCAGCAGTGGGTCAGCCTAGAAGGCAGCAGGGTAGCCAGCAGCCAGTCTGAAGAA Gene BVV0102_289626 + 0 NULL GK000010.2:85952855-85992306 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33638 TTGTCATGTAGCCAAGACTGGAGAAACAATTATACCTTTTACTATTCAGCGACTATGTGA Variant GeneID:504900|PPP4R2:XM_002696957:98_cdna 164^334 1 EMBV3_07732 GeneID:504900 22 GENE PPP4R2 NULL protein phosphatase 4, regulatory subunit 2 EMBV3_06213 GGGTAGAAGGCAGTAGAGGGGAGCCAGACCTTTTTCTCCTACAATTGGGTCTACTCAAGC Gene GeneID:531336|AHNAK:XM_002699316:330_cdna Constitutive 0 NULL GeneID:531336 29 GENE AHNAK NULL AHNAK nucleoprotein EMBV3_42790 CATTTGCAGCAACACGGATACAACTAGAGATTCCCATGCTAAGTGAGGTAATCAGAAAGA Gene BVT0102_045677 + 0 NULL GK000013.2:29898673-29912190 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31228 ATGGTGTTTTCCCTGTGAGTTGATGAAGTGGGGGATGGACGGGGCTGTGATCATGGAGGA Gene GeneID:538100|SCN4B:NM_001076912:107_cdna Constitutive 2 NULL GeneID:538100 15 GENE SCN4B NULL sodium channel, voltage-gated, type IV, beta EMBV3_03398 TGGCCGTGGCCTTCTACCTCGACCATGATGACGTGGGCTTGAAGCATTTCTCCCACTTCT Gene GeneID:615578|LOC615578:XM_002700233:218_cdna Constitutive 0 NULL GeneID:615578 X GENE LOC615578 NULL similar to ferritin heavy chain EMBV3_27772 TCTTCACTGTGACTGAGACCCGTGAGGGTGGCGCTGAGGTGGATGAGCCTCTAATCTCAA Gene GeneID:616350|CD177:NM_001099155:388_cdna Constitutive 0 NULL GeneID:616350 18 GENE CD177 MGC157159 CD177 molecule EMBV3_08251 CAACTATTTTGGCGTCTACACCCGCATCACTGGTGTGATAGGCTGGATCCAGCAGGTGCT Gene GeneID:614844|LOC614844:XM_002687689:63_cdna Constitutive 0 NULL GeneID:614844 5 GENE LOC614844 NULL similar to transmembrane protease, serine 6 EMBV3_00733 AATCGCTGGGCTCCGCTCTTCTGCTGGAAGTTTGACTCACTTTGACCTGTTCGACCTAGT Gene GeneID:616673|LOC616673:XM_002685070:194_cdna Constitutive 0 NULL GeneID:616673 1 GENE LOC616673 NULL hypothetical LOC616673 EMBV3_38174 GAACTGGGACACGGTGCCAACACGAGAGGAAAAATACCTTGAAGAGAAAGACACAGGACC Gene GeneID:783240|MGC165762:NM_001099189:56_cdna Constitutive 0 NULL GeneID:783240 4 GENE MGC165762 NULL Leucine-rich repeat-containing protein ENSP00000371558 homolog EMBV3_19916 GTGTTCAGCCAGGCCTCTGGTGTTCTGGACGGTCACATTGTTTTAGACAGTATTCAGCAG Gene GeneID:523379|SLFN14:XM_002695652:104_cdna Constitutive 0 NULL GeneID:523379 19 GENE SLFN14 NULL schlafen family member 14 EMBV3_07762 GCTTGGGGACAGGAAGTGTTTGCTGAACCAGGTGAACACTCATACCTGGCCCAAGTGTTC Variant GeneID:513052|TOE1:NM_001075594:152_cdna 372^468 1 EMBV3_07368 GeneID:513052 3 GENE TOE1 MGC139728 target of EGR1, member 1 (nuclear) EMBV3_04778 AAGTAATCCTGCTCTACTCCCCTTTTCTGAAAGACTCTGGGGATTTGAGAAGTGGCAGTG Gene BVT0102_395648 + 1 EMBV3_34587 GK000030.2:131717093-131724168 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245745 TCONS_00245750 TCONS_00245740 TCONS_00245747 TCONS_00245746 TCONS_00245742 TCONS_00245753 TCONS_00245752 TCONS_00245749 TCONS_00245744 TCONS_00245751 TCONS_00245748 TCONS_00245741 TCONS_00245739 1 XLOC_150819 Coding TCONS_00245750 XLOC_150819 Coding Coding GPR64 X:131656940-131718604 j TSS184415 7334 1 TCONS_00245750_15 894 0.204663212435233 27 0.881501062225322 0.00013913264692673 4.82073274610022e-05 3.8711548025224e-05 4.41000737552341e-05 3.34826763961079e-05 9.46209554282354e-05 6.19663165186118e-06 4.08502660003973e-05 6.45497871696996e-05 0.000194428071749703 0.000361806169083889 0.000107138742537716 6.1780540195488e-05 0.000386149915138518 0.000137721101103157 0.00104352700006104 0.000398712176575041 1.51633369145167e-05 6.6029136896873e-05 5.50576678422564e-05 3.82191465748626e-05 0.000699886736429511 0.000222689706929109 0.000573211500193166 6.99530621438697e-05 6.63853822930345e-05 7.8447149538114e-06 9.00930445532954e-05 2.21732412755531e-05 0.00016778053264153 XM_005228402.1 GPR64 PREDICTED: Bos taurus G protein-coupled receptor 64 (GPR64), 0.0 8120 100.00 0.613716934824107 NM_005756.3 GPR64 Homo sapiens G protein-coupled receptor 64 (GPR64), transcript 0.0 5104 85.32 0.613035178620125 TCONS_00245750_15 sp|Q8IZP9|GPR64_HUMAN GPR64_HUMAN G-protein coupled receptor 64; 0.0 1472 84.68 0.998881431767338 0 coding 0 0 1 0 -0.112981958173681 0.472859237076787 0.0117449522361825 0.822945738824667 GGTGCATTTCAATTCCTTTATTGAACCAACGATATTTGAAGCAGTATAGTATGCAAGAGATTAACCAGCTGACCAATAAGATGAATGGGAAAGAGAGTCACAAACATCCCTTGGAGGAGGAAGAGAGCCTGAAGCAAGCGGTTGAAGAGCATGTCAGCAATTATTTTGCTGATACTAGGGAATGGGTGAGGCTTCCTCCCTGATACCTCAAATGCCAGCCAGGTTGGCTATATCCTGAAACCAAATCATGTTGACGACTTTGTTGAGCACAAAGAGGGCAGCACCCAGAGAGCACTGAAAAGTGATGTAAGGAAGAACTCCAGCCATGACCAGACATCCCCATGTAGTATGGATCACCAATAATCTGGGCCGTTACTGACTGAAGGACAGGAATTCGAAAAAATAAGAGGAGACTGAACCAGAAAACTCCACCATTCCAAGCGCAGCACTGAAAAATTCTACTAACAATATGTGGTTCACTGCCTTGCTTCCTTTCTATGCTCTGGGCTCTCTGAGCCAGGACACTGCTTGCCCTTCTTCGACGCTGCTCCTGTCTCTCTTGCTGAATTCAAGCATTTAGCTTTGAGATGGTACAAATTCCCCAGATGGAGTCTTTGATTCTCCTGGCAAGGTCCTGCAGGAAGGTTTTGACACTGTTAGCTGTCTCTTTACCGCCCAAACTATCAACTACAGAAAGAAGGGAGAAGTGTCCCCAGATATTTCATCATGAAGGACCCGAGAGATTCGCTGCCATGGCTCTAGCTCCAGCCGGGCCCCTCGCCCACCACGGGCCAGCTCAGCTCCTCTGAGCCCCTCCGTGCCCTGCTGCCTGCTGTAGCTTGGGTGCTGCCAGGGCTAGGGCTGCTGCGCCCGCACTGAATACTGATTATTTTAAGCTACCTGTGGAAATGGTTTTCCTTGCCAATATTTGATTTAGGAATAGGCATGTGACCGGCTTTAGCCCAAAGAGACACCTGGGAAAATCTGCTGGGGGACTTCCAGGAAAAAGTTCCCCACTCTTGACACTCCAGGTTTCTCCTCTTCCTCTAGACATGCACTCTCTTCTAATATGATAGCCACTAGACACATGTGGGTATTTAAAATTAAAATAATTAAAATTAAGTGAAATTAAAAATTCAGATCCTCAGTCACACAAGTTACATGTCAAGCACTCAGTGTTCACCTAGGGCTAGTGGCTGCCTTATGGGACAGTGCAGACACAGTATTTCCATCATTGCAGAAAGTTCTATTTGATGATGTTGTGCCTGGATATTTTGAGTTTGGATTTGATGCTGAAACAGTGATAGCCATCTGAAAAACACTGAAAGGGGCTAGGGATCTCAAGTGAAAATGCAGATAACCTGAGGTTTTGAAAGGTTGTCTTCCCTGATAGCTCAGTTGGTAAAGAATCTGCCTGCAATGCTAGAAGATCCTGGTTCGATTCCTGGGACAGGCTACCCACTCCAGTATTGGACTTTCCTTGTGGCTCAGCTGTCAAGAATCTGCCTGCAATATGGGAGACTTGCATTCTATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGAAAAGGCTACCCACTGCAGTATCCTGGCCTGCAGAATTCCATGGACTGTATGGTCCATGGGGTCACAAAGAGTCAGACACTGAGTGACTTTTCCTTCACTTTGAAAGGTTGAGTCCCTAAACTAACAGTATCTGCAGGATGAAAGAACAGAAGGCTGGAGAGCGTGTGGGTCTTCATAGAGGTTTACATTTGTCACATCATTTTAAATACTTTGGGACTTTTCCTGGTGGTCCAGTGGCTAAGACTCCACAATCTCAATGCCAGAAACCCACATTCGATCCCTAGTTCAGGAACTAGACCCCACATGCTGCAACTAAGAGTTCACATGCCACAACAAAGATCGAAGACCCCACATGCAGCAACTCAGACCTGGCTCAGCCAAACAAGTATTTTTTAAAAAGCTTCATGTGTTACCTTAGTGAATCCTGACAGGAGCTACAATCAGGTGTTAATCCTTTATTTTCTAAATGAGGGAACTGAGGCTTGGACAATTGGAGTCACTTCACACAGCTGAAAAGTAGAAGTGGTAGCATTCTTGAGAGCTGTACTATAAAAAAGGTTGAGCACTTAAGAATTGATGCTTTCAAGCTGTGGTGCTGGAAAAGACTCTTGCGAGTCCCTTGAACTGCAAGGAGATCAAACCAGTCAATCCTAAAGGAAATCAACCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTCCAGTACTTTGGCCACCTGATAACAAGAGCTGACTGATTGGAAAACACCCTGATGCTGGGAAAGATTGAAGGCAAGAGGACAAGGGGGTGACAGAGGATGAGATGGTTGGATGGCATCACTGACTGAATGGACACGAGTTTGAGCAAACTCTGGGAGATAGTGAAGGACAGGGAAGCCTGGCGTGCTACAGTCCATGGAGTTGCAAAGAGTTGGAGACGACTAAGTGACTGAACAACAACAACAGCATTCTAGAACTTGGGTCCTTAACCACTCCCTCAATATTTAGTCCCTGAAGCAGTTGAAAGTTACTTTTACACAATTTTTACTGAAACTTTGCTGTATTCATTTATCTTGTGATGGATTTTTACCTCCAAGACATCTGAGGAATAAAAGCAATAGTTTTGCTGATTTAATCTATTAAGAAGTAAGTTGATGTTCCAAGAGAACATGCTGTTTGAAACGTACCATGATGTGGGTACATCTTTACTTCAAGGAAATAAGAAGAAACAGATTGATCTTGGCAAGAAGCCTCGTGTTCACAAGATCACAGTGCTGTAAAAAACCATCAAGAACATGCTTACAATTCCAGTTTGCTGTCACCATCTGCTGAATCATCTCTCGTTGATTTTGTCCCCTACTCCAATGAGGTTGAAACTACAAGCCTAAATGATGCTACTTCAAGCGTGTTATCTACTTTGAACAAAACAGAAAAAACTAAAATCACTATAGTAAAAACCTTCAATGCATCAGGTGTCAAACCCCAGAGAAATATCTGCAATTTGTCATCTATTTGCAATAACTCAGCCTTTTTTAGAGGTGAGATCATGTTTCAATATGACGAAGAAAGCAATATTACCCAGAATCAAGTTATGGCTAATGGCACGGTAACTGGAATCCTGTCTCTAAGGGAATTGAAACAATCAGAACTCAACAAAACTCTGGAAACCTTAAGTGAGACTTATTTTACAGAGTGTGATGCAGCAGAGTCCCAAAGCACAGTAAATTGTACATTCACCATAAAATTGAATAAGACAATGAACATATGTGCTGTGATGGTTGCTTTCCAAACAGTAAAGATTCGACCCATGGAACAGTGCTGCTGTTCTGCCAGGACCCCCTGCCCTTCCTCCCTGGAGGAGGTAAAGAAACTGCAGTGTGACCTGCAGGATCCCGTTGAGTGTCTCGCTCGTCATCCACACGGCCCACCATTCTCTTCTTCCAGCAATGCCATCCCAGTTGCTCCTCCGGCCACCATTGTGTCCCAGATCTCTAGTGCCTTCTCTTTTGCTGAGCCTCTAGCTCATCCAGTTGTAACCCAGAGCCCTCACTCTCCAACAGGGGTGATTCCACTACCTTCTCCCCAGCCTTCAGCTCCCATAACTTCCAGCCCAGCCATTGATATGCCCCTGCCATCTGGAACTGTCTCTTCCCCTAAGCCTCCACCTGATCTTCCCCTCACCCTGTCCCCTGGGAAGTCGTCAGCCCCCTCTCCAACCACGTCTGCCCCTGTGAACGTCAACACGACCGGCATACCTCCTGACAAGACAGAAATTGTTCATACCAGCAGCATCAGTGTTTCTGATCTTGAGAACCAAGTGTCCCGGATGGAGCGGGCTCTGTCCTTAGGCAGCTTGGAGCCTAAACTCGCAGGACAAATGATAAACCAAGTCAGCCGACTCCTTCATTCTCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTGGCTTACAGCTGAATTTTTCAACCAAGACAATAAGTCTGACCTCCCCTTCTTTGGCTCTGGCTGTGATTAGAGTAAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCTGCGAATCTTCAGGTTTCTCTGGAAGCTCAGGCTCCTGAGAACAGTATTGGCGTTATTACTTTGCCTTCATCGTTGATGCGTCATTTACCAGCTGATGCTGTGGAGCTGGCTTCCAGGGTGCAGTTCAACTTTTTTGAAACTCCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTCTGATCAGCTATGTCATTTCCTCAAGCGTTGCGAACCTGACAGTCAAGAACTTGACAAGAAACGTGACGGTTACCTTAAAGCATATCGACCCGAGCCAGGATGACTTAACAGTGAGATGTGTATTTTGGGACTTGGGCAGAAATGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTGTCAAAGACAGGAGGCTGAATGAGACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCGTTCTGCTGGACTTGTCTCGAACATCCTTGCCACCAGCTCAGATGATGGCCCTAACATTTATTACCTATATTGGTTGTGGGCTTTCATCAATTTTTCTGTCAGTTACTCTTGTAACCTACATAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGCGCAGCCCTGCTCCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAAGAGGCCTCTGCATCTCAGTGGCTGTATTTCTGCATTATTTTCTCTTGGTCTCATTCACATGGATGGGCTTAGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACATCCGAAAATACATCCTTAAATTCTGCATTTTTGGTTGGGGCATCCCAGCTGTGGTTGTGGCCATCGTCCTGATTATATCTCCAGATAACTATGGGCTTGGATCCTATGGGAAATTCCCCAACGGGTCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATCACGGTTGTGGGGTATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTCAGCTCTGTCGAATTAAAAGGAAGAAGCAACTGGGAGCCCAAAGAAAAACTAGTATTCAAGACCTCAGGAGCGTCGCTGGCCTTACATTTTTACTAGGAATTACTTGGGGCTTTGCCTTCTTCGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTCAATACCTTACAAGGATTTTTCATATTCGTCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGGAGACGATATCTGTGTTGTGGAAAGTTACGACTGGCGGAAAATTCTGACTGGAGTAAGACTGCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGGGTCTCCAGCTCTTCAAATTCCTTACAGTCAAACAGTAACTCCACCCACTCCACCACGCTGCTAGTGAATAATGATTGCTCAGGACTTGCCAGCGGGAACGGGAATGCTTCTACAGAGAAGAATGGTGTTTCTTTCAGTGTTCAGAATGGAGATGTGTGCCTCCATGATTTCACTGGAAAACAGCATATATTTAATGAGAAAGAAGATTCCTGCAGTGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGCTTACACTTTATTGAGCAAATGTGATTCCTTTTCCTAAAATCAAAGCATGTTGCTTGACAGTGTGAAAATGTCCAATCTTACCTTTTACACAATGTGAGTTGTATAAAATCAACTAATTTTATACTCAGCAACTTTGGGATGAACATAAGCTAACTGAGGGCAATGGTTGCTATTGGAAGAGGAAACCAAGACATAATACCATGGTTCTAAGACATTTGCAATTTGGTTTCTTATCCTTCATTTTAAAAGAAGATTGGTTTTAAACAACACACTAAGAATAAGACTCATTTAAAACAAAATCAAAGCAGTTCATTTGCAGCCTCTTTTAAAGAGGCTAATATATCTTTGATAACATCATAGAAAGCCACTGTTGACTTGATCCTGTTGGTGAGTTCGTTGTGCATGCCTTTGTTGTAAATAAGCTAAACTCTAGTGATCCACATGTCAAAAATCTTCTGCATTTTTGGTATTTATTTTCTACTGTGTAAATTTCTTTCTTTGTAGAATCATGGTTGTGTTGTTGCGTCTAATGTGATAATTCAGAAAATCGTTGCTGGTTCAGTGAACTCTAAACCTCCTTTTGGAGATTATATGGGATGTGAAATACAGGACCCTCACTGAAATCAAGAAATAATGACGCCAGCCAGACTGGAAAAATGTAAGCAGACAGTGCCACAATTAGCTCATACAGTGCCTTGGAGTGAGTTAGAAAAAGGTGCTCCCACTGGGCAGACACAGTGTCATGGGCTCATGATTTGGCAGAGTGGAGGCCATATTTTAGCCTCATTCACTCTCTTGGGTACACCATTGTTCAGGGTACCAGCTGTACAACCATACGTAGCATCCAATACCGACACCCATCTCCTGACCTCATTCCTAATCATCAGATTATGGAAGCTGCACCAGGATGTTTAGCTTAACACCTTGGTGACAGAGAGGGATGGAAGTGTGATCTGGACCGTATGGCAGGAAGATCGTGAATGTGCAGGAGATACATACACTGCCACTTCTCAAATCCCCAGAGTCTTTCAGAAAAGGGGAGTAGAGCAGGATTACTTTTTAAAAGAGATGTACATCAAAAGAATCATATTGCTGTTCTTTAAAAGGCAACTGCATGGTACTTTGTTGATTGTTATGCCTGGTACACTCTAGCCCAGCCAGAGCTATAATTATTTTTTAAAATACTTGTCTTGATGAATGTATAGTGACAAGGGGGAGCAGCTATTGGGAACAGTGAACTATCCTGCAATGCTATTGTTTCCATATATATCGAACCCTTATTGCTCCTAGTCACAGCGAGTCTGTCTTGCTTCCTACCTACAACTTCTTGAGCAGTGCTTCGTGTCCTTATTAGGAACATTTTGAAACCCTTTAGTTAGGTCTTTCACTAAGGTTCCCTTTCATATATATTTCAAGTGAATGCTGTATCCCAGACTAACCGTAGTCATAATGTAATACACTTCTGTGAGTGCTGATTAGTCTTTGCGCTATTTCTTTTCCAATTTGTTTAATTGTCTTGTATTTATATGTTAAAATCGACAAAAATGTTAAAAATCGCCAAAATAAATTTGCAGTTAAGTCCTT EMBV3_15690 GTGCTTGGCACATAGCAGTTGCTCAATAAACTAGCTGAATGACTGTGCCAACCTTCTGGC Gene BVT0102_406797 - 1 EMBV3_25124 GK000003.2:94844046-94861222 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19488 GAAATGACACTGCCCGAGGAAACACAAAAGCTGACACAACCTCAAGGCAACTGGAAGAGG Gene GeneID:616198|LOC616198:XM_002690339:17_cdna Constitutive 0 NULL GeneID:616198 9 GENE LOC616198 NULL hypothetical LOC616198 EMBV3_04613 CTTCTCCATTATCTAGCATCTTGCTTTAAACCTAATAGGTGCTCCTATCCTTTCTGGCAC Gene BVT0102_034943 + 0 NULL GK000005.2:101876227-101896620 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24380 CTGCATTCAGATGACCACAGGGGCATACGTAGCTGGAAACCTGCATTCCATGATTCACGT Gene GeneID:783777|LOC783777:XM_002684686:63_cdna Constitutive 0 NULL GeneID:783777 1 GENE LOC783777 NULL similar to olfactory receptor MOR184-1 EMBV3_38973 GAAGAACTGAAGGTTTCCTAGTCGAGGTTATGGCATAGCACATTTATGGCTGAAGCAGGC Gene BVV0102_428383 - 1 EMBV3_21553 GK000029.2:41400060-41454919 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34063 GCAGACAAGGGCAAGTGCGGTCTACCCGAGGGGCCCCCATGGCGTCTGGACGATGGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26639 GTGGGCTTCACCTCTGTGCCACAGGGACAGGTTTCTGAAATCAAAGTTGATTAACACAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35611 AGGCCCCATCTGAAGGGATAATGAGATGATGGATGGTGCTCGATGTCAAGTGGAAACAGC Gene BVT0102_210777 + 0 NULL GK000019.2:24978135-24983316 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095915 TCONS_00095912 TCONS_00095913 TCONS_00095916 TCONS_00095914 1 XLOC_057835 Coding TCONS_00095912 XLOC_057835 NonCoding Coding P2RX5 19:24980653-24985451 j TSS71397 3432 5 TCONS_00095912_2 92 0.0731351981351981 2 0.284969772774651 6.77961181963911e-82 0 0 0.000132983110881995 0.000104365470617822 1.04226694243196e-06 9.92052422693772e-05 3.32590861474143e-248 3.86443439682166e-211 0.000143334026845899 6.71128997067347e-06 2.60722214951315e-05 1.7076649794364e-58 0 1.28984209383006e-132 0.00142235594948135 0 5.04940459820187e-05 0.000386309886485653 1.7058960103146e-05 4.44228982609121e-05 0.00120790473936379 1.72582462494696e-23 0.000428931423416157 4.08533307930602e-22 0 0 0.000427179147556955 2.21372452283484e-05 3.28829286060022e-05 XM_005220260.1 P2RX5 PREDICTED: Bos taurus purinergic receptor P2X, ligand-gated ion channel, 5 (P2RX5), transcript variant X2, mRNA. 0.0 6190 100.00 0.999708624708625 NM_002561.3 P2RX5 Homo sapiens purinergic receptor P2X, ligand-gated ion channel, 5 (P2RX5), transcript variant 1, mRNA. 1e-68 266 70.44 0.160839160839161 0 noncoding 0 0 0 0 -0.0586296275543669 0.665528909454705 -0.0259056377209462 0.657141580882903 ACGCAGCGGGGCTGGCGGAGCAGCCAGAGGTGCAGGATGAAGGCGGCGCCCAGAAGGAGAATGGCTGTGTGTGTGGGCAGCTCCTCCAGCCCGCCAGGTCCGGCCACCAGGGGAACGGAAAGGTGAATGTGGAGCAGCTGCAGAGCCTGCAGACCGTGGAGGCGTAGCCAGGGATGTTGGCTGAGAGCAGATTTAGGACAATTGTCCACACCTCTGAAGTGGGAAGAGTCCTGTCGTCGTCCACATGGAACCAGGCCTCCAGGGACAGCACCTCTCCTGCACTTTGGGATCTTGCTACAAGCTTCTTGTTATGTGTGTGGGGAGGGGGGGCCTCCCAGTGGGCGCAGTGGCTCATGCAGAAGAGGCCCTAAAGCGCATTCAGTTACTCATTCATCCATGTGGTAAACAGTTTTTGATGCCGGCTGTGGGCTGGACCCTGTCCAAAAGATGCTTGAATGAGACACTGACCTGGCCCTCAGAGAGGGGAGCACTCATCTAATTCCCTTCGGAGCTGGTGGACATGACAGCTGGGCCGCACACTCTGGCCTGCCTCCAGCCGCTAGCTGAGACCTGTACCATTAGCTCTGAAACCCTCAGAGCAAATGATGGCTCCTCACAGAAAGACCTTGGTCAACTTCCAAGCGGACATTTGGCCTTGCCCCCAGGGGTGAAATTTAAAGGCGTCCAAGGAGGCAGCCAGCAAAGGACTAAAGGACGGGACCTGTGAGGAGGCAGCCGGCCACGAGGCGAGGAGGAGGAGAGCCTCGGGGAGCCTGGGGGACAGCGTCTCACCCCAGTGGGAGATGTGCTTGCCTGTGTGGTTGGGCTCTCGCTGTTCTGTTGGGCTTGTTTTTCCCTGCTCGGCTTCCCTTCCTCTAAGGCCCCATCTGAAGGGATAATGAGATGATGGATGGTGCTCGATGTCAAGTGGAAACAGCTGTAAGTAAGCTGGTCCTTGACCCCCTCCCTCAGTCGCTGTAAAGCACTGCTGTTCAACGCGTGGTCCATGGACTCGCAGCACGGGCATCACCTAGGTGCTTGTTAGAAATGCAGTCTCAGCCCTCCCTCACCGCCCCCCGCCCCCAAATCAGAACCTGCATTTCAACAGGATTCCCAAGTGATTCATGTGCATGTGAGTTTGAGAAGCAGTGCTTGAGGAGATATGCAAGGCCTGGCTCTGAAAAGGCCTGCTTTGGTGGGTGGTGTCAATTTCTGGGTCACACTGACACTGAAGTTAACCTCGAGACCAAGCAGATTCCCTCCTTCCCTGCCCTGGGAAAGTGACATTATGCTCAATTCATTCAAATTATTTTGAGTAGGTCATACTTAAATGATTCAAAACTTAAGACGTACAGAGGAACAGAAGTGAAAAGCTTCTCTTCCACCCCTGTTCCCCAATTCCCTGTGCTACCAATTCCAAGAGGCTCACCAGTCTTGCTGAGAATTCACTGGGTTACTCATGTCTTCCCTCAGGAAATGAACATTGCCGCCTGCACTCAGACCAAGTCCCTGCTGTCGGACGAGATGGAATGTGCTGGGCTGGGGAGCCCCTGCACAAGGGGAAGGGCCTAGAGCTCCATCACTGTTGGAACCACCGGGCGGCCAAGGCCTGCGGTGCTGCCTGTCTCCCCGCGAGCCCGGGTGCTGTCTGAGCACTTGCCCTGCCTCCAGGGAGCATTCTCTCTGTGAGGACCCTGGCTCTCCTCTGCCCAGCGGGGGCAGTAAGCCCCCTTCCGCTGGGGCCTTTGAGGAGAGGGTCAGAGGGGCGTGGTTCACAGAAGAGGACCCCTTGGAGAGCAAGCAGCTCCTCCCCCTGGGCTGCCAGGCGACCTGTCAGTAAGCTCAAACTGCTGCTCTGACAAGAAAGTGAGAAAGGCAGGTGATCTCCTGTGGTGTCTCCCTCTCTAAGGCAAACCCTTGGATTTAACAAGACAGCCTGTTACTTGTATGTCTGGAAGGGAGTTCAAAGGGCAGGGGTCCCAGCCACTTAGAAGTTGGTCTGTGTTCCTTTAACCTGTTTTTGGAATCGCTTGGCAGCAGCCACACAATTTGCAGACAGCTGTGCTACTTGTTTTACACTGGAATGGAAATGTCTTCCTACAGTTATTCATCCAGTCAGTAAATAGTATTGAGTGCCTCTCGTGTCGCGTGTTGGACCAAATGCTGATGGCAGTGGCGAGCGGCACAGAAACGGCCTCTGCTCCCAGGTGCCCAGTGTCTAGGGGTCACACACCAGTCACAAACAGGACGGGATGCTTCGAGAGTCCTCAGTGAGGCGCAGCCAGATTTCCACAAGGAAGTGACATGTGAGTTGAAATCTGAAAGGTTAGTAACAGTCTAACCAGGTGAGGGGAAGCATCCAGGTCAGGGAACCACACGTAGAAAAGACATGAGGAGGACTTAGCGAGGACTGGATGAACAGTGTGTCTGGAGCAGCTTCTGTGACGCTTTCATCACGTGGGCATTCATTACTTTTAAGGGTTGCCCCTTTAAACCTCCTGCCATAGAGGACTTGTTTCTTTAAGTCCAGCAAAACCTTCCTGGTGGCTTCCCCACTAGATGTCAGGAGCCCCATGCACAGATGGCCCTGTGACCCCCATCACAGCTTCTGGATAGTCACACATAACCAGTTCCCTGGCTTTTGCACAGTTCTCCCCACCACCCGCATAATCTTGACTCTGAAGGGGGAAGAAGAGGAGCAGGAATCTGAGCACGTTTCACACTTGGGAAAGCCCCTTTCCCTCGGCACAGGAAGATGACCACGCCAGCCTCTCAGATCTGTCCATGCTGACATCTCAGTATCACAGGAATTGTCTATGGTTATGTTCAAGCCTTGGCCTAAAAGCCCTCTGCCTAATGTCTTCCTGACAATCAGACTTATTCCATGCCTTTGGAGTACCATGATGCTGGCCAACAGGAAAGTTTTAAATTAAGTGCTATTAGTGTGACATGATGGGGACCAGCCACTGAAAGAGCAGAGTGCCCTTTACTCCTGATGCAGGGTCATCAGGACTGATCCATCATGGATGCCTTTCTGCTCCCCTCTCAACCCCATCAGTTCCTCTCTCAATGGCTAGCTAACCCCCTGGGGACCAGTCATAAACGGGGAATGTGACTTCCTCCAGGTGTCTCTGAGTGCCCCGGGAAGTCCTTACATCACTCCAAGTGGAGAGGCATCTTGGATGTCTGGTCTACTTGGTTCCAACCTGCCCCTCTCCTCCCCAAGTGGTACAACTTTCCTCAGAGCATATTCTCCAGGGGAGCCAAGAATGCTCTCTACAAAAGACACCTTTCTTCCAGCTCTTTCCCCTTAGGCCTGTTCACAGAATTAAAGCCGGGAGGATGGCAAGCATTTCCTGGGTCCTGCCCAATACATGCATTCTCTGACATTTTAATTTGGCTATAAGACAATAAAAAGGTGTTAACTTTAAA EMBV3_27332 GTCCTGGGGAGCAAAGATGAAAAACATAAAGAATATGAAACTGGAGCTCTCCATGGACAC Gene BVT0102_361163 + 0 NULL GK000007.2:23355526-23425296 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24935 AGGGTTCCCAAAGATATCCATCCTCTGTGGCCTCTGCTAGTTCCCTTCAATCAACACAAG Gene BVT0102_017830 + 0 NULL GK000006.2:65221914-65694742 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205348 TCONS_00205349 TCONS_00205358 TCONS_00205360 TCONS_00205363 TCONS_00205357 TCONS_00205351 TCONS_00205355 TCONS_00205352 TCONS_00205353 TCONS_00205354 TCONS_00205345 TCONS_00205364 TCONS_00205350 TCONS_00205362 TCONS_00205359 TCONS_00205347 TCONS_00205361 TCONS_00205365 TCONS_00205356 TCONS_00205366 1 XLOC_124638 Coding TCONS_00205361 XLOC_124638 NonCoding Coding - 6:65625721-65694837 - TSS153368 652 1 TCONS_00205361_1 56 4 0.990624321782536 0.00401071176263266 0.00200099877528612 0.00269458913420994 0.000842870452015302 0.00144311155966775 0.000299521782988684 0.000997109556562874 0.00110448112183921 0.00118789525641695 0.000116492398447102 1.22912569283176e-102 0 7.79730806475993e-08 0.000407887684266228 0.000841504195243367 0 0 0 0.00339179536126473 0.0019166965717752 0.000677098550080429 0 0 0 0.0011125765434506 0.00339809393385207 0.00166188008204752 0 3.2774104160872e-29 0 0 noncoding 1 0 0 0 -1.37867223347636 0.0704758632891399 -0.0925439099312957 0.24093393567271 TGGTACTTGCCCACCGCTCTGAGGAGCTACCCGCAGGTGGGCCTCGCAATTTCCTGCGCATGCCCAGTGAGGCGGGGCCGCGCCAACTCTCTTGACGCACAAACTTCTGGAACCCCTGCCGTCTGCAAAGGTTCCCATACGTGGTGAGGTCTCAGCCCCCAAATTTTCTCACAGCCTGCATAATAGCACTTGGGCTTCTTTGAGGAACCGAGTTTGATGGAACTACTCAACTGGATTCCTGGACTTCTGCAAAGGCTCTCTCATCCATGGGTCTAACTGTTCTCTGGGGGGGCATGCTGAAGAGCAGGAGCCAGTTAACAAGGCATTGCAGGTTCTACCACCAGGACCAAGGACAGAAAAGTTGGGAAAAAAAAGGTTCCCAAAGATATCCATCCTCTGTGGCCTCTGCTAGTTCCCTTCAATCAACACAAGAGTGAATGTATCTCATCACTATGGCAACCATCTGCTTTCACTCATATTGGATGAAATAAGAGAAAATGGAGGGTCAGACAGTCTCCCTGGACCAAGGGCTCAGAAATGCTAAGAAACAGACTGAAAACAAAGAATACCGGTGCCTAATATCCTGCTTTGCTTGTAACATATACCAGATGTAGTAGTCCATTAGTTGCCAAATAAAATTATTCCCAAATGA TCONS_00205343 s 5' 403809 TCONS_00205343 s 5' 403988 EMBV3_32885 GGCATTTGCACAGTTTATGCAGAACTTCAGTGAGTCTAATTTTCACAATTACACCTTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19522 CTTTCTCCCCGTCCACCTGAGTTTCTTCTTGCAGTTCCTGGTGAGGAATGGCTTCATCGT Gene GeneID:539107|GPR55:XM_002685646:368_cdna Constitutive 0 NULL GeneID:539107 2 GENE GPR55 NULL G protein-coupled receptor 55 EMBV3_26672 TTTCAACGCTTCTCTGATGCTCGACCCGCACGTCCAGGGTGGCTTCTACCAGCTCGGGAT Gene GeneID:538955|FOXL1:XM_002694756:513_cdna Constitutive 0 NULL GeneID:538955 18 GENE FOXL1 NULL forkhead box L1 EMBV3_15303 ATCTGGGCCGCATGCTGCGTTGTCTCAAAGGGGATTCCCGTCGAAACATCATCATGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28481 TGTCACCCAAAGGCAGCATCTCGGAGGAGACCAAGCAGAAGCTGAAGTCGGCCATCCTGT Gene GeneID:530023|CABIN1:XM_002694694:291_cdna Constitutive 0 NULL GeneID:530023 17 GENE CABIN1 NULL calcineurin binding protein 1 EMBV3_06303 CCTGGTTCTGGGCAACGTCAACGTGACACTCCTGCCGCTTCCTCCTCAACTCCAGGGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23672 GTATGGGCACCATCCAGCTCAGGACATTTCTTCCCGTAGGCCAACTGAATTCTTTCCCCT Gene BVT0102_077550 + 0 NULL GK000016.2:55306136-55410365 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069649 TCONS_00069650 TCONS_00069653 TCONS_00069651 TCONS_00069654 TCONS_00069655 TCONS_00069652 1 XLOC_042022 Coding TCONS_00069655 XLOC_042022 Coding Coding PDPN 16:55405087-55442966 j TSS51891 5348 1 TCONS_00069655_2 169 0.163986537023186 6 0.858968266539944 0.000138130377998379 3.73229602286065e-09 8.73784825054532e-08 6.76974011512279e-05 1.31215713343466e-11 2.37282125193702e-05 0.000108896382879421 1.29038868114434e-10 0.000116451369676628 0.000133781218506154 1.6064382168513e-05 9.14059360129316e-05 0.000102415293535209 5.0111055535729e-06 4.50244196808365e-12 0.130372171556106 0.0668317433535447 0.101670302105137 1.22780111662952e-06 0.000489784526607431 2.73789938795268e-14 0.0326399753197315 0.0295570605579703 0.0618839303987917 9.77140970377343e-06 8.16597884679081e-09 0.00017845077468344 0.00332898781211767 0.00198441836905277 0.00458798270212244 NM_001033120.1 PDPN Bos taurus podoplanin (PDPN), mRNA. 0.0 915 99.80 0.0951757666417352 NM_006474.4 PDPN Homo sapiens podoplanin (PDPN), transcript variant 1, mRNA. 1e-115 423 69.34 0.205310396409873 TCONS_00069655_2 sp|Q86YL7|PDPN_HUMAN PDPN_HUMAN Podoplanin; 5e-35 123 46.86 0.994082840236686 1 noncoding 0 0 0 0 -0.0251199956455223 0.842745892956352 -0.0117511535174371 0.854869288465439 GGTCATCGTTTTCGCGCTGGCCAAACACAGGCAGGGGGCGGTCCTAGCGAACCCGAGACTGGGACCACCTTAGCGCGCGGACTCACCCCGCCCTCGCCCTCGTCGGAGAGATAAATGCTGACTCCGATCCGAAAGTTCCCAACTGCAAAGTTTGCTTCTCCGGCAGCTGTTGCTAGCTAAGTAACTTGGGGATTCCCTCCCTCGCTGGGACTCCGTTTTCCAGGCCCCACGTCTCGCGCTCCATCAAGGGAAGGCCCCTGGCTACGGAGCTTTTTCATCTTTCCCCAGCCCAGAAACTAGCTGCTCGGCCCCCCACCCCAAAGAACAAGTCAGCTAAGAAAAATGTGGAAGGTGCCAGTTCTGTTCTTCATTTTGGGAAGTGCATCGTTCTGGGTCTTGGCAGAAGGAGCCAGCACGGTCCGGCCAGAAGACGATGTGACTACAGGTGTGACAAGTGAGAAAACAACCCTGGGTGTGGAAGATTACACGACAACCCCAGCTGCCAGTAAAGAATCCTTGGCAACTCCGATGCCAGCAGGAACAGAGAATGTATCACATGATCACAGAGAAGATCTGCCAACTGCCGAAGGCACAACAGCCGAAGGCACAACAGCCAAGAGCACGCCTGCCAGGAGCACACCTGCCAGGAGCACAACCACAGTCCTCACCCGTGTACCAGCGACTAGTCACTCCCAGGGGAAAACAGATGGAGAAAAACCAAAAAGCACTCAGAAAGGTGGCTTGTCAGTGGGGACCCTGGTTGGAATCATTGTTGGGGTCTTAGTAGGCATCGCAGTCATTGGTGGAATCATCTCTGTGATTGTTCGGAAAATGGGAAGATACTCGCCCTAAAGTGCTAAAGAATTGTGCTGTTCTGCCAGTACATGTAAAAAAAGAGTTTCCGACATCCCCCCCTGCGACGTCCCTGAGCACATGGAGAAGATGACCCGTGGAATTGCTTCACCACCACACTCAAAATCCACGGTGATCCCTCCACTCGTTAAAACTAACCGAAGGAAAGAGTATTCATAAGACGTGCTCCTCTAAGCCTTTGTCTTTTGAAAAAAAAACTATTGTTTTAATATAAATTTTGTGTGTGATTTAAAAGGCAAAATGCATAGAAAATGGAGCAAAGCTGTGTTAAACCTGATTTGTAACTAAACAGACAATAGATTGGGTTGGCCAAAAAGTTTGTTAAGGTTTTTACCGTAAGATCTTACAGAAAAATCTGAACAAACTTTATGGCCAACACAATCAGTGAATGTCAGAAGCTGTAATTGTCTTTGTTTTTGTCTTTGTAATTAGTCTTTGTTTTGACTCTCCTCTGTTATTGTTAAAATGCAAAGGAATCTGAAAATATTTATACCAATGGCGTCCTTGGGGATAGAGCTATGTCAGTTAGTGGCATAAGTGCTTTGCAGTTTCTGATCTGTTAAAACATACACATTCCAGTCCAATGGGGTCCGTTTTTAGAGCCTGATTTGGTATGGATAATGAAGTAGAAAATTTATACTTGTATAATATGTAATTAGCAACTGGCTTTCACTGGTCCAGGTAAAGCATTTCAAAGACATCTATTTTAGATCATAAATAGAAGTCTTACTTTGGGGAAAGCATTTTGTTTCTCACACCAAGGGTCTCGGTGTACTCTACTGTCTTCTCCATTGATGACTTGATGAGTCAAAGGTTTGTTTGTACACAAGCATACTTGTGCACAAGTATAAATTTTTTACTTCCATTTTCCTCAGATGATAGAGATCCAGACCTGACGGGGTGGCCTTCTCACTTCCCGATCACCCAAGTCCTCCCTATTGGCTTCTTTGTTCTGGAGTATGAGGACCTCAGCCCCGGAGGCCCAGTGATGCCAGGGGCTCAGGTGTTCCAGGGACTGAGCCGCAGTGGTCCCCAAACCCTGCGTGTGCTTGTGACAAACAAAACCTGTCGGCTTCCTAGCATTTACTTTCTGCTTCAGAGGAAGGAAATGGGAATGCTAATTTTTAAAAGACAACTGGATTTTGAGACTTTATCTTAAAATGGAAGCTGTTTCTGATTTTCACGAGATCCCACATATTTCAGTGGGGTCATGATTGACAATTCTGTATGGGCACCATCCAGCTCAGGACATTTCTTCCCGTAGGCCAACTGAATTCTTTCCCCTGCACAAAAAGGTTTTACGCTGAGCAGATGCTGTGTCACAGTTGCGGTTATACATTTCTGATAGCCTCTGAATTCATCAGGTCCATGAAACAGGAAAAAGTAGACTATCAGTCAGAAAGCCTGGCCTGTTCCCCTACCTTTTGCATTAATGGGTGGATGTAATTTGAAACAGTATGCCCTTGTGTCACTCAAGTCCAGCTAGTCCAATATCCCAGGTTCAATATTTGAACATCAGCTGATGGAGAAAATGGGCTTTGGAAATGCTTTATGAATCTCTTAAATACCCTTCCATTTCATCACTCAGATTTCTGAACAGGAGTTGGAAATAATGCTAATTTCCTCTTTCTTATTCTCTTTTTTTTTTCTTACTGTGAAAAATAATAGTCAACCCCAAGTCATACACTGGACCTGTCACCTGCTGGGACAGGGCTATGGGTTTCCTGGTCACATCTGTGTTGTGCTCAATGCAGTGTAGACATGTTTTAAAATAAAACAGATGATTGAGTGTAACAGTGAGTCAGATCTGTGATTGGGAATCTCCATCAAGGTTGGATCACCCCTGAGTACATCTCCAGATAAGATTACACGTTATATAAACATCTGCCTCTTGGCTTGATTGGGAGTGAATTATAAATGGTCATAGGAGGTACATCCATGGGGAAGAAATATAACTGGACCTTTTGCCCAGGGCTCTGGCAAAGTAGGAAAGTTAAGGTCAAGTGGAGGAATGGGAGGAAAAGTGGCACTTTGGGATTAGTTTTGCTCACTCTGGTCACAAATTGTTAACAAGGTTTTGCCTGGCTCCTGATTTCTCTGCCCTGGAGACTGGAGCCAGGAAAGGGAAGCAGTTATACCTTGCTCCTGCCAGCCTACCTGGGAACCTGACCTCAGGTGGGTAGGGCTTGACCACCTAAGAAAAGGTGGTAATAACCCTTGTGAAGTTTTTCTAACTGCCTATGGCCTGGGATGCAATCGCTGCAGAATTCCTGTTCCTGGGACATCTCACTGCTTCTTGACCCATAGCGCAAGCACTCTGCAGAGTCTAGAGACTGGAGCAGCCAGGCCCTCTGTCCCTCTGTCAGTCTACCTACTCCGCACCCCCACGCACAACGCCTCATATGGAACTAATGCCACACCTGTGTCTCTCCCCTCCAACCCTGTCTCTATTCATAAAGGCTGGGTTTAGCATCATACCTTCCTCATAATACTCAGTTTTTGTTAAGGCAGAGTTGTTGAATTTGCCAGATGTCTGGAATCCTGAGTGCCTGTTTCTAAGTGGCGAAACTAACAGGAGAGGACTTGAAACTATGCATTTTCTAGCAGAAAACTAACCATATCCACCGAAGTCCCACAGACTCCCAGGCCATCCGCTATGTCAAGTGTCAATTTATACACGCCACCCGCAGGAGACTACTGGGACCAAACAGACTGCCAAGAGCACTGGGACTTTAAGGAAGCAACTCCATCCTCTCTTCTCTTAGAGATGCCTGGGGACCAAGCAGTGCTGAAGTTAACTGTGAGGTAGCAAAGCATCGTTTGGGCTTCCCTGTTGGCTCAGATTGTAAAGAATCTGCCTGCAATGCAGGATACCTGGGTTCGATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTCTTGCCTGGAGAATTCCACAGACAGAAGAGCCTGGCAGGCTATAGTCTATGGGGTTGCAAAGAGTCGGACATGACTTAGCAACTAACACACACACAAAGCATCGTCTTAACCCTTTTTTTTTTTCTTTCAACCTGGGAGAACCAGGTTGAAACCAAAAACAAGACTTAGTTCTGCTTTAGTGAACAAAGAATGAGTAACTTAACCTCTTACTCTTTCCATCTTTAATTTATATTGATTTAGTATCCAGGGTTGCCCCTGACAAGTGCTTTGATGGGGCATAATGCATATTCTGACATAAAAGCTTTGCTGATCTGAAGTCCAGTGGAAGTAGAATTTCTCTGAAACAGAGCTGGATCTTAGCACATACAGTTGGAGCACACAGTTATCTACCTGTGAGCGTCAGTGAACTTGGCGTTCCCTGAAAGCAAGCATTTCTCTTTGCTCTTCCTCAAAGCTTGAAGCTAGGTTAGATGTAAATAGACCTTGTAACATGATTACCACAATCAAGCTATCTTAACGTCTATCACCTCACATGTTACTTTTTCGTGTGCGTGGCGAGAACACTCACTGTCTTAGTAAATTCAAGAATACAGTGCAGTGTTACTAACTATGGCTTTCCAGATGGCACAGTGGTAAAGAGTCCACCTGCCGATGCAGGAGACCCGAGAGACATGGATTCCATCCCTGAGTTAGGAAGATCTTCTGAAGTAGGAAATGGCAACCCACTCCAGTATTGCCTGGAGAATTTCATAGACAGGAAGGAGCCTGGCAAGCTACAGTCCATGATGTTAACTATAGTCACCATAATGCACATTTGATCTTGAGAATTTATTCATCTTGCATAACTGAAAGTTTGTATCCTTTGACCAGCATCTTCAATCAAAACATGTTGTACACCTTAAATTTATACAATTTTTACTTCTCAATTATACTTCAATAACATTGAGGGGAAAAGCCAGGTTAGGATGTATAGTGGATCCATGGGCTTTTAATTTAATAAACGCACAGGATGTAACCACAGTTCATGGGCAATATGCAGGATAAATGTAAAATCTCTTGGAGGAGAAGAATAAGGCTGCTGTAAGGAATGTGAGATTTTGGCCCATTGGCCCAGCACACATGATTCAGGCAAAATGCAAGCCTGGATTCACCAACGATTAATCCTCAGCACTTTTCACCCTGGGGGTCATATTATCAGACACAGGTGCAAAGCACCCAATGCTTTTTCTGCACCTAAGTGCTGCAGGCCACCACACAGAGTCCCATGCATCTTCCTGAAACCTTGTTCCTCCCATGTTCTTTCCTACCCCTTTCCCTCCTACCGCTTTTAATTTTCCACAGATGGCAGGGGATTGAGAAAACAGTCCAGGTTCGATGCACGGGGCTGGTGCACTGGGACGACCCAGAGGGAGAGTAGGGGAGGGAGGAGGGAGGAGGGTTCAGGATGGGGAACGCGGGTATACCTGTGGTGGATTCATTTCGATATTTGGCAAAACTAATACAATATTGTAAAGTTTAAAAATAAAATAAAATTTA EMBV3_14666 TGCCTTGAAGATCAGGCCAATCTCACAGCCTTCTGTCAGTCCTGTGATGAAAAACGCAGC Gene GeneID:504762|LOC504762:XM_002686346:6_cdna Constitutive 0 NULL GeneID:504762 3 GENE LOC504762 NULL similar to chromosome 1 open reading frame 87 EMBV3_37960 GCAGGCTAGCAAGCTCCTGTGTTGTTTGCTGGGTTTCCCTTTTCAAGATAGGGGCACAGA Gene GeneID:618631|CDK3:NM_001099178:44_cdna Constitutive 0 NULL GeneID:618631 19 GENE CDK3 MGC160000 cyclin-dependent kinase 3 EMBV3_35831 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28877 GTTGCAGTGGGGCGGGGGTGTTGTTTTTCTCAAAGCTACCTCTTACGTTTGTCCAGTTCT Gene BVT0102_058424 - 0 NULL GK000015.2:25116351-25142908 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17289 CGAGCAGAGGAAAGCTCACGAGAAGGTCTGCATGGCAGCGTTCGAGCACGAGATGGAGAA Gene GeneID:508004|MKRN2:NM_001045989:16_cdna Constitutive 0 NULL GeneID:508004 22 GENE MKRN2 MGC134369 makorin ring finger protein 2 EMBV3_29837 GGATCTCTGCCAGGCAAGGCTGTCTTAGAGTGCTGACTGGTCACTTGAAGCTTTGCTCTA Variant GeneID:100139217|LOC100139217:XM_002696162:110_cdna 200^522 2 EMBV3_08345 GeneID:100139217 19 GENE LOC100139217 NULL similar to hCG1818127 EMBV3_14702 GAGGGCACACCTTGAATCGAAGGTTCTGTGTATTGTTTCCCTAGACCTGTGCAACATGGT Gene BVT0102_096751 + 0 NULL GK000018.2:35794543-35795186 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082985 TCONS_00082990 TCONS_00082982 TCONS_00082989 TCONS_00082991 TCONS_00082984 TCONS_00082986 TCONS_00082981 TCONS_00082983 TCONS_00082988 TCONS_00082987 1 XLOC_051156 Coding TCONS_00082988 XLOC_051156 Coding Coding SLC7A6 18:35764172-35795262 j TSS62480 5367 1 TCONS_00082988_6 515 0.0180734115893423 12 0.827752581298852 0.000725962866375199 0.00019255092180248 0.000335036967249759 0.000323168944323284 0.000492124402251116 6.74866333190253e-05 8.70762776510629e-05 0.000429563268271115 0.000926754640595869 5.19646525793589e-17 2.45554885278942e-30 1.37857002548e-16 0.000122307466824033 4.92023601632102e-07 0.000272115742655752 5.67434041002902e-58 8.81659320032133e-22 3.32962916369383e-52 0.000532056544604923 0.00144349090945855 2.03712420184566e-51 1.00885906524211e-48 1.27147281858435e-10 3.31364596046412e-24 0.000564469956526197 0.000230070557939492 0.00033891259081055 5.67345450256495e-09 6.31150482253875e-09 6.15763601686136e-17 XM_005218634.1 SLC7A6 PREDICTED: Bos taurus solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 (SLC7A6), transcript 0.0 8917 99.07 0.938513135830073 NM_001076785.2 SLC7A6 Homo sapiens solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 (SLC7A6), transcript variant 1, mRNA. 0.0 3837 77.54 0.878889509968325 TCONS_00082988_6 sp|Q92536|YLAT2_HUMAN YLAT2_HUMAN Y+L amino acid transporter 2; 0.0 954 89.90 0.998058252427184 2 coding 1 1 1 1 -1.51709681989593 0.0111188537187439 0.00767913073997351 0.874529448245564 TGTGTGAGGAAGACGCGGCGTGTGTGTGTGTTTGTGTGAAAGAGAGAGAGTTGGTCTGAGGGTGACTCTGAGTGTGCGAGACGCAGTGTGAAGGTGACGCTGTGTGTGAGAGAGACCCTGGGCGTGAGCATGACTCCCATGAGTGTGCGAGAGACGGAGAGAGGAGATGGTAAGAGGCCGTGAGTGTGAGAGAGACCGCGGTCAGAGTGGCCCCGAGTGTGGCCCTGGGAACACGCGAGAGAGCGCATGTGGGTCTCATGCTGAGAAAGAACCTGTGCTGCGTGGGAGAGACTCAAACTGAGCACGGCTCACGGGGCGAGACTGAGCATAGATTAATTCGACAAGACAGACACTTGGAATTAGTCTGACTGGGGAGACTTCATTTTCTTCTTTGTACCTGACCATTTATGATGAAGTGGCTTGTGAAAGTGTGATGGTTGCTTATTTCCTCACAGGGCACTTTTGAAAAAGAAAGGTTGAATGGGCAAGCAGCAGTGTGGGAAGTAAGGCTGTAGTAAACACAGGTGAAAGAACCACTTGCCATGGAAGCCAGGGAGCTGGAGAGTCCCACACCCACATACCATCTCATTCCTGAGGCCAGCCAGCCTAGGGAGGAAGAAGGTGACTGCATGCTGCCTCAGCGGGCCACAGAAACTATGCAGCTGAAGAAGGAGATCTCTCTGCTGAATGGCGTCAGCTTGGTAGTAGGCAACATGATCGGCTCAGGAATCTTCGTTTCACCCAAGGGCGTGCTGGTCTACACTGCCTCCTATGGGTTGTCACTGGTCATCTGGGCTGTTGGTGGGCTTTTCTCCGTTGTGGGTGCCCTTTGCTATGCAGAACTGGGGACCACCATCACCAAATCTGGAGCCAGCTACGCTTATATTCTTGAGGCCTTTGGGGGCTTCATTGCTTTTATCCGCCTCTGGGCCTCACTGCTAATTGTTGAGCCCACTGGTCAGGCCATCATCGCTATCACCTTTGCCAACTACATCATCCAGCCTTCCTTTCCCACCTGTGAGCCCCCGTACCTGGCCTGCCGTCTCCTCGCTGCAGCCTGCATGTGTCTGCTGACATTTGTGAACTGCGCCTATGTCAAGTGGGGCACACGTGTGCAGGACATGTTCACTTATGCCAAGGTCCTGGCACTCATTGCCATCATTGTCATGGGCCTTGTTAAACTGTGCCAGGGACACTCTGAGCACTTTCAGGATGCCTTTAAGGGTTCCTCCTGGGATGTGGGAGACCTCTCTCTTGCTCTCTACTCTGCCCTCTTCTCTTACTCAGGTTGGGACACCCTTAATTTTGTAACAGAAGAAATCAAAAACCCAGAAAGAAATTTGCCCCTGGCCATTGGGATTTCTATGCCAATAGTGACGCTCATCTACATCCTAACCAACGTGGCCTATTACACAGTGCTGAGCATTTCTGATGTCCTTGGCAGTGATGCTGTAGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTTGGCTGGACCATTCCCATTGCTGTCGCCCTGTCCTGTTTTGGGGGCCTCAACGCGTCTATCTTCGCTTCATCAAGGTTGTTTTTTGTGGGCTCCCGTGAGGGCCACCTCCCGGACCTCCTGTCCATGATCCACATTGAGCGTTTCACACCTATCCCTGCTTTACTGTTTAACTGCACCATGACACTCATCTACCTCACTGTGGAGGATGTTTTCCTGCTCATCAACTACTTCAGCTTCAGCTACTGGTTCTTTGTGGGCCTTTCTGTCGCTGGACAGCTCTACCTTCGCTGGAAGGAACCTGATCGGCCACGACCTCTCAAGCTGAGCCTGTTTTTTCCCATCGTGTTCTGCATTTGCTCCTTGTTTCTGGTGATCGTGCCCCTCTTCAGTGACACCATCAATTCCCTCATTGGCATTGGAATCACCCTCTCTGGGGTTCCTGTCTACTTCCTGGGTGTTTATCTGCCAGAGTCTCGGAGGCCACTCTTCATTCGGAATGTCCTTGCTGCTATCACCAAAGTCACCCAGAAGCTTTGCTTTTGCGTCCTGACTGAGCTAGATGTAGCTGAAGAGAGACAGGCTGAGAGGAAAACTGAGTAGAGGCCAGAAGTGATATCCCCCAAGGCCTGGAAGGCTGCTACCTGGGGCCACAGCCACCGAAGTCCAGATTACAAGACTGTGTGGACCCAACCCTTTTGTGCTAAAGGAGGGCTGTTGGCCCACATTATGTAAGGGGGCTCAGGGCTGATGGCCTGCTCAGGTGTTCACTCTCATTGGTAAGCTATGGGAGGAATCTCAGGGTCTGGGGCCAGCCTGAAGGTGGGGACTTCAGAGGGTGGTGGTGGGAGAGGACTTGGGCAGTAGGGGAATGGTGGTTCAGTTTTGTTCTGGTGAGTACAAACACTTACTTGGTGAGTTGCACTGGGGGAAGAGGGAGTGCTAGGTTAACAGCTGGGGCTGTTGGTTTCTGAATTTGACGTTTGAACCAGGAGTTTCTCTGAAGGGGATGCTCTGTGGGAAGTTTTCCTCTGACCAGGTCCAAGCACCTGACTTTAGAGGTCTGAAATATTACCATTTCTTCCTCTGGTTCAGAATCCTTCCCTGGGAAGAGGGTTGTCTTCCATTATTTATTGATATTATTTAATCCAGAACACCAGTTCCAGCAAAGCATTGGTCTTCATTAATTTACAGGATGTAATAGGCTGATTGTATTTAAAAATTGAAAGTACCCCAAAGCGAGTCCCTCTGACCTTAGAGGTATCTATGTGGTGGTTGGTGAGACTCTGACCACAGATTTTTTTGCTTAGTTTTAGCACAGTCTTCTGGAAAGATTTTTTTTTTTTTTTACTCCTGTACCGGTTACACTTTAGTATGTAGATAGGTCACACGTTAACAATCACCTGGCTCAAGTCCAGGAAGGACAGATGAACAAATGTGGGAGTCAGAAGCCTGGTAAAACTGCTACTTTGAAGGCTAATCCTTTATTTTACTTGAGACCTTAGTTCTTTGCTGTAGTTGGTAAATCCCTGGTTTCTGGTATGAAGTCTAAGAAGGCAGAAACTGTTCTAGGATTCAGGTGAATCACTTGAATTCTTTCAGCTGACAGTGGCTTAGAGACCATTTCCGGGACCCAAGCTGACAAGTAAGTTGTTCCTCTCTGTAAGGGCTGCTATGAGGGGCTGCTGTGCAGACCCATGCAAGCCCATTGTGGTGCTAGAAGTGGTCATTTTCCTGGAAACCTCACATCAGGCTGCATCATCCTCCTTGTCCCCGACACCAGGCTTTGTTTACACTCTGAGCCACTTTGGTGTGGGTCATTTGGACACTGCAGTCCTCTTCTGCCTGCCTCCCCTTGCCTGAGGTTTGGGGGAGCTGCAGTCTCAGGAAGAGCTTGGTACTTGTGGGAACTTGTTTTCTCCCTGTGGACATCAGTGACGACTCTGGAATAAAGCTGCTTCCACCTCCACCTGGCTCTTCAGCAGACTCATGATCAGAAGCAACTAATTCTGGTGCTCAGGCTGCGCTTTAGCTCCCAGGTGTGGCCGGAGTGGTACATCTGACCTAACGGATGTTCCTTCATGGGCCACCAGGCTGCATTGGATTGGACAGCCGTCCAGTGTTGCTTCCAGAAACTCATCCTGGACCCAGAAGAACCTGCTGGCTTGGTGTGCCCCCATGGGGTTCTTGTCCTTAGGTTTTGAAATCAGTCAATGATAAAGACAGGAACTGTGAGGCAATCTACCTTTCCGAGCATTCTTCTCCACCATACTGGCCCTAGCTGCAGACAAGGGAGTGACCTTGGTCATACTTGTTCAATTAAGGCAATTTAGGGGAGCATGCTCACAGCTGCCTTTGGTTCAGGGTATGCCTCTGTGAGAACACAGGAGTACATTCCTCCCGTCATGGGTTGTGGATTTGCCTGACAACAGGGAGTCTTTTGCAAAGGCTGACTTGCCCAGACTATGTAAACATGACTCCTGTCTGACCCAAGCTGGCACCTATCCCAGGGATCCTCTGGAGCTAATCCTTTGAGTATGCTTGTCTTGAAGGATCCCCCACCCATGCTTTAATTTTCTTCACTGAAGTAAATGACCAGCTTATCTCAGGAACTTATCATCTCCCAGTGGCTGCCAGGCAAGCAAGGACCTCACGCTCTAGGTTCCCTCATACTTGCTTAGTGAGCCAGGTCACCCCCTCTCATTACTGGATGGTGACTGTGTTCTTCCCCTCTGTGTTGGATACAGACTTCTCCCAGGAACCCTTCTGAGGGAGGGAAGCCAGAGACTCCCTACAGCACTACAGCTTTGTTGTATAATTAATTTCTTCGAGGTCTTTGTTGTTGATCTCCTTCAGTCCTTCTCATGGTGTGCTAATCCTTCTGCAGTGGGTACAGTTTGTGAAGCTGTCAGCCCTTTAATATTGGCAAACTTTAAAGAGTACATAAGAGCAGTGAGCACGTTATAATAGCAGAGTGGTTTTCAATCCTTTGCTTCTATGCCTGCAGAAGACTGAGATGACTGGTATTAAACCTGGAAGTTGTTGCCTGTTGCTTGCAGCACTGAACTGCACCTTAGTGGATACTTAGGATAGGAAACCAAGTCTGTCTGTTGGTTTTATAACTGCAAGAGTAGGACAGAAGTGAATCACTTGAGGAGGTTTAACAACTTCATGTAGTTAAGAATATAGGCAAAGATGTACATAAAATAGAAAGTGAAATGGGTGGAGGTAGGATAGAAAAGTAGAAATGCTTATGAAATCTTAGAATGGGCAGGAAGACATTTCCTTGTTTATCTTCCCTTGTGAGAGTAAGTCTGTGCCCCAGGGCAAGAGGGCACACCTTGAATCGAAGGTTCTGTGTATTGTTTCCCTAGACCTGTGCAACATGGTAGCTACTAGCTATAAAGAGCTAAAGTATTCAGTTCCTCCATTGCAATAATCACATTTCACATGCTCAATAGCTGTATGTGGCTAATGCACAGTGCAGATAGAGAACATATTCGTCATTACAGAATGCCATCTTAGTCAGAGTTAAGGCATTTGTGGTTTGGAAAGGAGTAGGGACAGAGTTTGCTTACAAGAGATACCAGTTTTGGTAACAATATTGGTCCTGTTGACAGCAGTTTGGTTTTGGTGACTGCTGTGACTAGTTAAAACATTTCTCAGTGGAAAGCCAAGTTTAGGATGTGCTTTGCTTTTCCTCACTTGCTTTATGTCCTCAGTGTTTGAAACTTCTCACTCCCTTTTGGCAGGTGTTAGGGGAAGCAGGGAATATGGTGGGAAAACATGTAAGACAAATTTTACTTGCTCCCAATGTTCAAAGTTTTTATTAAATACATTTACACATACCTTGTTCCTTGGCACCACTGCCAGAGGAAAC EMBV3_13030 GTCTGTGAGGACATCATGCTTGCAGATGACAACTTCTTAATGACACCTTATCACATTGGC Gene GeneID:616159|LOC616159:XM_002685082:232_cdna Constitutive 0 NULL GeneID:616159 1 GENE LOC616159 NULL hypothetical LOC616159 EMBV3_24339 CACGTGGACAGGCCCATTCTTCGCATCCCGCATCCCCAAGTCCTACATGATCAGCGCAGA Variant GeneID:506882|DNPEP:NM_001045952:56_cdna 484^995 1 EMBV3_36219 GeneID:506882 2 GENE DNPEP MGC128181 aspartyl aminopeptidase EMBV3_39800 ATGTGGAGCAATATGCAGAAGGACCATCCCGATTTTGACTCTGAGAAGAGGAAGGTAATA Variant GeneID:507311|DYNC2LI1:NM_001038051:65_cdna 608^676 1 EMBV3_22125 GeneID:507311 11 GENE DYNC2LI1 MGC133720 dynein, cytoplasmic 2, light intermediate chain 1 EMBV3_12069 CTGCTCAATAGGTATTTTGCCAGGGAGCCGACCACAAAAGCAGAATTGCTGAGTAGTGTC Gene GeneID:525400|MAGEA9B:XM_002699675:60_cdna Constitutive 0 NULL GeneID:525400 X GENE MAGEA9B MAGEA9 similar to Melanoma-associated antigen 4 (MAGE-4 antigen) (MAGE-X2) (MAGE-41) (Cancer/testis antigen 1.4) (CT1.4) EMBV3_32742 ATTTATTAACAAGAGGATAACCCTTGAATGTAACCCCGATAGGGGCGGCCTAGGCTGGGC Gene GeneID:539996|SEMA3B:XM_002697032:469_cdna Constitutive 0 NULL GeneID:539996 22 GENE SEMA3B NULL sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B EMBV3_18223 CTCGCCCCATTTTGCAGAGTGAGAGTACCTACTTTGGTATTGAGCTTGACTTGTGACTTC Gene BVT0102_163538 + 1 EMBV3_08667 GK000024.2:59571919-59670120 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03095 GAGAAGGGGTTCTCCAATGTCTGCTTCATCCCAGGCCTCTACCTCAGGATCAGAAGATGG Gene GeneID:504533|UBL4A:NM_001034214:37_cdna Constitutive 0 NULL GeneID:504533 X GENE UBL4A MGC128599 ubiquitin-like 4A EMBV3_29790 AGCTCCTCAGCGTCATGCCCATCCCAGAAGACCGACACCACGGCACACCCATGCTGCTAG Variant GeneID:515589|C13H20ORF27:NM_001046205:1090_cdna 512^634 2 EMBV3_06356 GeneID:515589 13 GENE C13H20ORF27 MGC137204 chromosome 20 open reading frame 27 ortholog EMBV3_08075 AACCAGGTTCTGGGCAAGATCGAGAGAGCCATTGGCCTGAAGCTCCGGGGGAAGGACATT Gene GeneID:515380|EDF1:NM_001035307:38_cdna Constitutive 3 NULL GeneID:515380 11 GENE EDF1 MGC127033 endothelial differentiation-related factor 1 EMBV3_14634 ACTTCCCAAGGACTCTGCACCGTGACCTTTAGCGGGGAGTGGGAAACATTGCGGTACATA Gene GeneID:528076|DARC:NM_001015634:296_cdna Constitutive 0 NULL GeneID:528076 3 GENE DARC NULL Duffy blood group, chemokine receptor EMBV3_10757 GGAGAAGGTGAACAGATTAGAGCCTTCAAGTGTGAGCACTGCCGAGTCCTTTTCCTAGAC Gene GeneID:786795|IKZF2:XM_002685559:28_cdna Constitutive 0 NULL GeneID:786795 2 GENE IKZF2 MGC159581 IKAROS family zinc finger 2 (Helios) EMBV3_15208 GGGATGATGAAATGTTCTGCAATTACATAGTGGTCATGGTCGCACAACTGTAACTACTCC Gene BVT0101_009315 - 0 NULL GK000009.2:96091444-96101794 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238122 TCONS_00238123 TCONS_00238120 TCONS_00238121 1 XLOC_144896 Coding TCONS_00238120 XLOC_144896 NonCoding Coding SERAC1 9:96099067-96103652 j TSS177869 3207 2 TCONS_00238120_2 57 0.229497973183661 2 0.300828970331588 0.000105391019304921 0.000811474916097082 7.54744510296787e-08 2.24749969495656e-24 0.000200528919676633 0.000122420068681127 0.0002703991929988 9.7702718935405e-32 0.000535162506216465 0.000111514786818613 0.000159814739566128 0.000172950166609207 2.37571821233971e-132 0.000483648667777525 0.000137817341401726 0.00624259638273509 0.0023887824955161 0.00036170495439095 0.00022692110171493 0.000203507069185975 3.25620070883407e-13 0.000182943786730221 0.00133517528719419 0.0031012774740046 5.75879509150193e-14 0.000366066566442654 0.000147288057595055 0.000139825374124543 4.38987715951692e-05 4.28227755291938e-05 XM_005211072.1 SERAC1 PREDICTED: Bos taurus serine active site containing 1 (SERAC1), 0.0 5588 100.00 0.96570003118179 NM_032861.3 SERAC1 Homo sapiens serine active site containing 1 (SERAC1), transcript 4e-157 560 72.13 0.34206423448706 0 noncoding 0 0 0 0 0.0474480304623748 0.669148376585434 0.0242454261081702 0.611446493304774 CCTTGGCATTTCCTCCCCTGCTTTGATTTAACTGATTAGACGGCATAGGTTAACTGGCTAACGCTGTGTTAGCTCCCACACTGAAAGCTGCTGCCTTCAGATCTAGGCCTTGGAGATCTAATTCCTGTGGATGTTAACCATCTGAACATTTGTAAGCCAAAGAAAAAGGATGCTTTTTTGTACCAGCGTACCTTACAGTTCATCCGTGACGCTTTAGCCAAAGACCTGGAAAACTGACAGCCGTCTTTTCCCTTTTCATATGTGAACACAGTGCAAGAAGCGTGCTGTTCTTTTTTTAAGCTCTACTCAATCATGCAGACATAGTCCTTGTGGCATCCAGGCGGCTTGGAGTGCGTCGCAGGCAGCAGACCACTGTTGTGTGAAACACGAACGTGAAAGGGGCGGTCAAGACTGAAGGGAGGCTAGACTGGACTGAAGGGAGGCTAGACTGCACTGTTTTGAGTAAAAAACAACTTCCTGTGCGTCGGTTTACTTTGTGCAGCGTTGTCCCTGGTGGTAGGGAGCAAGCTGCTGTGGCTGCAGAGCACGTGACCTGTGACTTTGGCCATCTGTGGCCATCCCCGGCGAATGCTGGGAGCGGCACGGGTGACTTCTGCAGGGAGAGCCATCACCAGCTTACCGTAGAAATGCCTCTCGGAGGGAACCTAAAGTGGAGAGAGCAGGAACTAGGACCTTCAAGACTCTGTTTTGGGTCTGGATTTCCATGTGCTGTAAATTTTAAAACTTTGTCAGTGTAAACCTTTGTCTAACGTGGTGGCTTTGTTTTACCTCTTGTCATCCATGGGTCAGTTCCTGGTAAGTTTTCATTTTCATATTGCTGAGAACAAGTATTTTTCTTTTTCAAAGAGTTCTAGCCTATAATAATTCCTTCCAGACTGTAGCTCCCTATACTTTTAATTTTTCTCAGATAAGAAGAATAAATCCATTATTGATCAGAGTGTGAGATAAAACTATTCTAAGCCAATACACGTATTAGCAATAGTTAGTATCAAGATTCTCAGATTCACTTTAGCAAAATAAAATATACCTTTCCTTCTTGCTCATTTGGAAGTGCTATTAATTGTCTCCAGCATGTGAGAAATAGGAAATAATATTGATGACTTTTTGAAAAATAATTGAAAAGTAATTATTGAAAAATAATTCACATACCGTAAAATTCAGTTTTAAATGTATAGCTCATGGATTTTTGGAGTAGTTACAGTTGTGCGACCATGACCACTATGTAATTGCAGAACATTTCATCATCCCCCCAAATAACCCCATACTCACCAGCAACCACTCTTCCTCTGCTCTGCCCCAACCCCTGATAAACACTGATCTTTTGGTCTCTATGGATTTGTCTATTATGGACATTTCATTATAAATGGAATCTTACAATGGAATGGAATGGAATCTTATGTGGCTTCTTCCTTTCTTTTTTAACATTTGTTTATTTGTTTGTTTTAGTTGTGGTATGTAGCATCTTCAGTTGAGATGTGGGATCTAGTTCCCTGACTAGGGATCAAACCTGGGCCCCCTGCAATGGGAGCTCAGTGTCTTAGCCACTGGACTACTGTGGGAGTCCCTAGCTTCTTTCCTGGAGCATAACGTTTTCAAGTCTCATCCGTGATATAACATGCATATATGTAGTGCTTTGTTGTTATTTTATGGCATATAACATTCTACTGCATGGATATACCACATTTGCTTACCCGTTCATCAGTTGATGGACATTTAGGTCCTTTCCATGTTGGGGCTATTATGAATAATGCTGCTGTGAACATTCATGTACAAGTTTTTTTGTGGAGATGTTTTACATTCTCTTGTGTATATACTAGGAGTGGAATTGCTAAGTCATGTTAAGCTTATGTTTACCATTTTGAAAATGATGGCCATTTGTAGAATGGGATAGTCAAAAGCTAAAACAAGTACAGCATCTGAAGGTAGACAGGGGTCATCCATAAACCCTAACAACATCTAATTGTTTAATTATGCAATGATCTAACAAGTGACTTGACTTATCTTATTATCCTGCTACAGAGAATGTGCTGGTTAGCTGTCAGCAATAAACTAGCTAATGGGATCACAGGGTAGAGGTGTAGGTATGTTTGGTTCTTTTTTGTTTTGTTTGTTTTCCATGAACCATGGCAGATAAACCACGGTTGGAACATCTGTTCATTAACGTGGAGTAGTAGAATGAAACTCCACTTCATAAAATCTCGATATAGCTATTATAGCTGTGCTTTAAAAATAAGGTCTAGCAGAGAGATCCAGTGTACTGCTGAATTACTATAGTTTCTCAGGCAAGCCACCATGTCTGTTTATTCTTTTTATGAAGTGGATATGATATTCACAGATTTACTTCAGTCTTGTGAGATTTAAGTCAATAATATTTTTAAAATAATCATCACCTGAAAAACTCTTAAGAACACAACATATGAAAACATAACACGTTTGAAACAGTTTTAAACTTAGACCATCAATAAAATGGTTCTAGCTCAGTCAGCCTTGTTTAAATGTCCTCTCTGGGAGAGGATTTCAGGAGAAGTTTCGACTACCTTTCCCCTCATGTGAAAAGTCACTTTAAATGACTCACCCAGAAGGAAATAAACAGTACAGGCGTGTTAGAGAGCAGACTCCTGAAAGCACGCTGTAAACACAATTCAGATGACTATGGAAAGCTAGTTCTTCTCATCTATACCCCTGTCACTTCTTTCCGGTTTCACTGTCAACCCTAAAAGTCGAGGGCACCGAGCCCCCTGTGCTCCAGCATGTAAATGTTGCCACAGAAAGAGACTGCTCGTGGAGCATCAGGATACCTTTCTCGACACTGGCTCAGCCATTCAGCCGAGGTTACACCGACAGCCGGAATATAGTGGAGGACGTGGCCCTCGGCTCAGTGGGCACGCCCGTGGTGTTGGGTGCTGGCAGACTTCCTGTTGAGAAAGGCACACGGTTATACAGTAATGAGTCTCTTGAGCTTGGTTCATAATTTAGGATGCCCCTCAAATTACTTCTAATTCCTAAAATTTGAGTTTTAGGCATACCCTCCTGAATTTTCACATCTTTGTAATATTTAATATGTTAATGTTTGGTTTGGTTTTTATTGACATTTGGTATAAAAATTATGTCCGTGAAAAAAATTTAAGCATGTTCAATAAATTAACTTTTAATTAAAAAATTAACACTTTGAAAGCTCCTAAGAAT EMBV3_20414 CGGCAGCACAGGTGAGCAGCTGAGGCGCAGGTTCCTGAATAGTCTGGGCACCATCTTCTC Variant GeneID:505009|GLTPD1:NM_001075182:46_cdna 68^201 1 EMBV3_11974 GeneID:505009 16 GENE GLTPD1 MGC140523 glycolipid transfer protein domain containing 1 EMBV3_11416 GTCTTTGGACTTATTTGGTTTTATAGACACAGGACCACTCCAAGGCCCAGTCAGGTGCCC Gene GeneID:513086|CCDC102A:NM_001077915:213_cdna Constitutive 0 NULL GeneID:513086 18 GENE CCDC102A MGC152229 coiled-coil domain containing 102A EMBV3_03071 ATGACCCTGCAACTGAGGTCCATATGCCAGAATTCGTTGCATGAAAGAGACCAAGAAAGC Gene GeneID:100294978|LOC100294978:XM_002689434:13_cdna Constitutive 0 NULL GeneID:100294978 7 GENE LOC100294978 NULL hypothetical protein LOC100294978 EMBV3_20831 GGGACTCAGCACAGAATTCACTTTAAACAGGGCCGAAGGAGTGTCCCTTCTCTGTGAAAG Gene GeneID:617018|RNF4:NM_001046589:34_cdna UTR3_Alt 3 NULL GeneID:617018 6 GENE RNF4 MGC137906 ring finger protein 4 EMBV3_40908 ATGCCGGAAAGTCGGCCAAGAAAGACAAAGATCCAGTGAACAAATCTGGGGCCAAGGCCA Gene GeneID:787187|LOC787187:XM_002696187:187_cdna Constitutive 0 NULL GeneID:787187 19 GENE LOC787187 NULL similar to ribosomal protein S25 EMBV3_25134 TTGTGGTCATTTTCTGATTCTCATTGTTGGAGTACTTAAGTCTTGGCAAGCATTACCAAT Gene GeneID:505221|KCTD3:XM_002693941:14_cdna Constitutive 2 NULL GeneID:505221 16 GENE KCTD3 NULL potassium channel tetramerisation domain containing 3 EMBV3_02020 TTGGGGTGGCAATCCAGGAAAAGGTGTTGGAGAGGGTAAATGCAGTCAAGACCAAAGTGG Gene GeneID:509857|PSME2:NM_001014889:113_cdna Constitutive 0 NULL GeneID:509857 10 GENE PSME2 NULL proteasome (prosome, macropain) activator subunit 2 (PA28 beta) EMBV3_02504 AGGAAGCAGGATCAAGAAGGAGGAGCTGTGAGACACTGAGATGCAGATATGACAAACGCC Gene BVV0102_062198 + 0 NULL GK000010.2:20934418-20960284 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013030 1 XLOC_007975 NonCoding TCONS_00013030 XLOC_007975 NonCoding NonCoding - 10:20935983-20940600 - TSS9731 1228 2 TCONS_00013030_3 54 0.378664495114007 3 0.734618717504333 0.000243750192495633 0.000212751000172394 0.00026715933232927 0.000764143874583806 0 2.33032588390922e-05 4.74894778089637e-06 1.44495913607894e-05 0.0012760889803029 0 0 0 4.67310566057588e-06 4.59673256282337e-05 0 0 0 0 5.8395260155327e-05 0.000117124273710345 2.47209369250622e-06 0 0 0 0 0.000223757465733063 4.7713017667183e-06 0 0 0 NM_001191456.1 WHAMM Bos taurus WAS protein homolog associated with actin, golgi membranes and microtubules (WHAMM), mRNA. 4e-13 80.6 78.43 0.0798045602605863 NR_023921.1 DHRS4-AS1 Homo sapiens DHRS4 antisense RNA 1 (DHRS4-AS1), transcript variant 1e-45 188 69.92 0.380293159609121 0 noncoding GTTCCGGGGATTGCTGTTTAACAGAATTCATACTTGCTAAAGGTTCAGGTAGTATATGTGGTGCCTGGGTTTGATCCTGGTCAGGGGAACTAGATACCTCAGGCTGCGAAGAGTTTGAATGCCACAACTAAAGATCCTGCGGGCTGCAACTAAGACCTGGAGCATCCAGATAAAGACAGTCCCTGTGGCAGGCGTGGAGATGCAGATACTGTTCAGATCCTTCTTCTAGAAAGGACTCACTTTTGCTGTGGGGAGTATGATTAGCAGTCACCAGCTGGCAGTCACCCCTTCCGAGCATGGCCTCAGCCAGTGCCTGGACAGGATGGTGACGCAACGACCTTGCCACTTCTGTGCCTAACACGGGGTTCCTCTAAGGGGCTCTTTGCTTTGGAGCTTCCTGTAGGTCTGGCGTTTGTCAGATCTGCATCTCAGTGTCTCACAGCTCCTCCTTCTTGATCCTGCTTCCTCCCCTTTCTGTCATGAATGTTACTCTGACTAAATCCTCTGGACTCCTAATTCCATCGGGTATCTGCTTTGTTGGGTACTCACAGTTTCTTTCCTTCATAATCTTTGCAGTGCAAGACCCCACTCCCAACACACAGCGGGTGTTCTCCCAGAGAATCTGTCCTTCCCCCACTGTCTGAGCAGCAGGGCACTCTGAAGCAAGAATCCTCTGTAACTGTGGTTCCTGCCAGTCTGAATTTTTCTATGAGGGACTGAGGAGAAAACAGCAGGGTGGGCTTTGGCTATATCAGGCCAGCACAATAGTGCAAGGCCAGCCCTGGAGCTCCATGTATTTCCCTGAGATCTCTCTGCTGGTGTGAGATGAAGAAATGTTCCCTGAAATATTTCATGTTCCTGTAAATTTCTGGATCAACTGAACACACACACACACACACACACACATCTTCCAAGAACCGACAGAAGTTCCTAGGGACAATGCAGCTGAATCCACAAAAGAAAGGGAAACATTTCCCTAGAGGTTCCAGCCTGCCCTCTCTGGAGATAACATTTGCCATTATTATGCAAAGCAGTTTCAGTTACCCTGTCCTGCTTTTAGAGCATTGAAAGAGGCCTCTAGTATGAAATGAATAAGGCCCATCACAAACCTTGCCAAAATGACAGAGCAGTCTACTTCTGAGGGCTTTCTCTTTGTTGGGCCAGATCAAATTCTTGAGCAGCATGCACTCTTTAATCTCTGCAGAGGAAGTAGGGGAACTTTAAGATT TCONS_00016292 TCONS_00016293 r 5' 1567 TCONS_00016292 TCONS_00016293 r 5' 1567 EMBV3_30414 GCGCAGATAGCTCGAAGACAGACAAGAAACTGCAAATTCAAGAAAAAGCAGCACAGGAGG Gene GeneID:538632|SFRS2IP:XM_002687322:135_cdna UTR3_Alt 2 NULL GeneID:538632 5 GENE SFRS2IP NULL splicing factor, arginine/serine-rich 2, interacting protein EMBV3_10256 GGGAGCATCACTGGCTGACATGCTGGTCAGACGAGAACCCCAAGCAGCACGTGCCCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24092 TGGCCCTGGTGTTTTCATTTACCTGAGACCAGGCTCCAAGGAGGTTGTGGACAGAATTGT Gene GeneID:532517|LOC532517:XM_002699092:85_cdna Constitutive 0 NULL GeneID:532517 29 GENE LOC532517 NULL similar to Olfactory receptor 10G9 EMBV3_10009 GCACAGGAAGCTTTGGGAGATGTTGTTTACTGTAGTCTGCCTGAAGTTGGGACAAAGTTG Gene GeneID:100336976|LOC100336976:XM_002687411:132_cdna Constitutive 0 NULL GeneID:100336976 5 GENE LOC100336976 NULL glycine cleavage system H protein, mitochondrial-like EMBV3_35745 CGCGAACCTGGCCTGTCTGGAACCCAAATTGGTGAATCTGCGTCCTGTGGAAAAATACAA Gene BVT0102_192430 + 1 EMBV3_15729 GK000002.2:10692823-11210619 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081894 1 XLOC_050771 NonCoding TCONS_00081894 XLOC_050771 NonCoding NonCoding - 17:73322643-73323079 - TSS61834 436 0.791284403669725 1 0 0 0 0 0 0 0 1.33754620188907e-06 0 0 2.74569516406098e-05 4.46948551169467e-06 9.40848518699641e-06 5.06223465669872e-07 0 0 0.00833244244093284 0.000966462445252387 0.00387099392020841 0 0 0 0.00159232419879898 0.00166329548588627 0.00183251182395734 0 0 0 0.000113211160701269 0.000161457112661942 0.00029268630826187 XM_005192833.1 LOC101909757 PREDICTED: Bos taurus uncharacterized LOC101909757 (LOC101909757), 3e-85 318 90.83 0.522935779816514 0 noncoding 0 0 0 0 0.0261587956829462 0.823260886386536 0.00627717193325281 0.904216634535155 GCAGCGAGGAGGGTGCGGGGCGAGGCTGGAGGCGCAGAGGCGAGAGCTGCCTGGTGGGCGGGGCAAGCGAGTGCGCGCCGCGAACCTGGCCTGTCTGGAACCCAAATTGGTGAATCTGCGTCCTGTGGAAAAATACAAGCACATCCTCGACCGCTAGTTAATAATGAGTCAGGACCCTTCCATTGTCCTGAGAGAAGGTCCTTCCATTTGACTAATGGCTTTGCATTCAATTGCTCTGGGCACCAATGGCGAAGCATTGCAGTAGTTCCGGCGGAATCGGCATTTAAAATATTTATTACAAAAAGAGCATGTTGCAAGATTTGATGGGGAGAGCTATACTTAAACTCCCCTTCTTTTAATTTTTGAATTTGAAGCTTTAATGTTTGATGTGCTCTTTCCACAATGGCTTGTCCCCGGGGATTATAAGGGATGCCTG TCONS_00076348 TCONS_00076342 TCONS_00076343 TCONS_00076344 TCONS_00076345 TCONS_00076346 TCONS_00076347 . 5' 1857 TCONS_00076348 TCONS_00076342 TCONS_00076343 TCONS_00076344 TCONS_00076345 TCONS_00076346 TCONS_00076347 . 5' 1857 EMBV3_22779 AGAGAACTGCCTAGCAGCCAACAGGCACTCAAAGAAGAAATCAAAGACCTGGACGCTCCT Gene GeneID:100139760|LOC100139760:XM_002707877:79_cdna Constitutive 0 NULL GeneID:100139760 18 GENE LOC100139760 NULL similar to zinc finger protein 665 EMBV3_43554 CCAAATTCAGCTACAAGATAGACTTTGCAGAAATGAAGCAGATGAACCTCACCACGGGGA Variant GeneID:539763|PARP11:NM_001082452:40_cdna 650^718 3 EMBV3_12660 GeneID:539763 5 GENE PARP11 MGC152112 poly (ADP-ribose) polymerase family, member 11 EMBV3_15898 GTCACCAGGGACCTTAGGGAAACACCTCGGGTCTTCGTTTGAGGGCAATCGTTTCTTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22663 CTGCACCCTGGATGACATCCCCCTCATCAGTGGCCCTGATCTGCCTCCTGCGCTATGGGC Variant GeneID:515742|TMEM150A:XM_002691366:221_cdna 384^451 7 EMBV3_26720 GeneID:515742 11 GENE TMEM150A TMEM150 transmembrane protein 150A EMBV3_11778 TCTCATCAAAGAGGACTACTTCCCAAGGATTGAAGCCATCACAAGCTCAGGGCAGATGGG Gene GeneID:540982|GLE1:NM_001034718:187_cdna Constitutive 0 NULL GeneID:540982 11 GENE GLE1 GLE1L MGC128703 GLE1 RNA export mediator homolog (yeast) EMBV3_03941 TCACTATCACCTTGTTCCTTGGCCATGTGGAGGTGGCTTCCTACAGTTGATGAGAAGCTG Gene BVT0102_121059 + 0 NULL GK000027.2:33661076-33717156 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00238 GTGCTTCATCCAGGGTTGGAGCAAAGAAGGGACTTAAGTATTGAGGAGCAGTCAGAGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30575 AGGAAAGGAGTTAAGGCAAACCAGGTCCTCCAGAGCTTCCTGCAGTCACAGGCAAGAGTA Gene GeneID:783604|LOC783604:XM_002686250:37_cdna Constitutive 0 NULL GeneID:783604 3 GENE LOC783604 NULL hypothetical protein LOC783604 EMBV3_22046 AGAATCCAAGCTTCTCTTGCTGAGCTGTACGTGGATGTCCTCTTGCTTTAGCCTCAGGAG Gene BVT0102_378446 + 1 EMBV3_10771 GK000008.2:44892130-44898337 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227509 TCONS_00225161 TCONS_00225156 TCONS_00225164 2 XLOC_138259 XLOC_137696 Coding TCONS_00225156 XLOC_137696 Coding Coding PGM5 8:44671343-44894637 j TSS168648 5605 1 TCONS_00225156_4 538 0.0945584299732382 11 0.974947714437981 0.000252855184010991 4.69448982118069e-06 9.96698434225032e-09 1.69401930975068e-05 7.53955536956906e-05 1.60305171688907e-29 3.04049978045352e-07 1.0463522601331e-31 4.99515295641726e-08 7.42050735581048e-27 5.26394619966889e-09 1.11024605597347e-14 4.84850444618571e-06 3.11217583550613e-13 1.9447881718461e-11 3.80585122578451e-11 1.52545805312727e-14 1.35456401540584e-13 3.36740318439114e-07 0.000137211745578194 2.46685959740709e-12 9.38725983131831e-15 1.14187954584691e-05 2.73780954608889e-14 0.000116951229132742 0.000126132739616294 9.28338822157476e-05 1.29679209025182e-10 3.25983333576552e-20 1.02944709979321e-14 NM_001102335.1 PGM5 Bos taurus phosphoglucomutase 5 (PGM5), mRNA. 0.0 5099 100.00 0.504192685102587 NM_021965.3 PGM5 Homo sapiens phosphoglucomutase 5 (PGM5), mRNA. 0.0 2962 83.30 0.504192685102587 TCONS_00225156_4 sp|Q8BZF8|PGM5_MOUSE PGM5_MOUSE Phosphoglucomutase-like protein 5; 0.0 980 93.54 0.947955390334573 3 coding 0 0 0 0 -0.129591152806084 0.309122413073442 -0.0277488394487839 0.596630570280949 AAGCAGCAGTTCTAGTAGGAAGAAACTCCCCGATCTGTGTCTTCCGTTTCTGGATGCCGTTCCTCAGAGAGCCAGATTTCAGCAGAAAGAGTTGTTAATGGTGGACTTCGGGCAACCGAAACCCCATGGGAAGAACAAGAAAGATGGAGAAAGAGGGGGTACTGTCATGATCTTCAACACTTTATTAGAGGCTGTTGATGCTAGAATAATCAGTCAAGATGAACAAAGGCACTCACTTTGGATGAAAATGTTACCTTCTCTTGCATTTCAGATTGGTCGACTGATCATTGGACAGAATGGCATCTTGTCGACGCCTGCTGTGTCCTGCATTATCAGAAAGATCAAGGCAGCTGGTGGAATCATCCTGACAGCCAGCCACTGCCCTGGAGGACCAGGAGGAGAGTTTGGAGTGAAGTTTAATGTTGCCAATGGAGGTCCTGCTCCAGATGTCGTCTCAGACAAAATCTACCAAATCAGCAAAACAATCGAGGAATACACTATATGCCCTGATTTGCGAATTGACCTGTCTCGACTAGGAAGACAAGAATTTGACCTGGAGAACAAATTCAAACCATTTAGAGTGGAGATAGTGGACCCAGTGGATATCTATCTCAACCTCCTTCGGACCATTTTTGACTTTAACGCCATCAAGAGTTTGCTGACCGGGCCCGGCCAACTGAAGATCCGAGTTGATGCCATGCATGGAGTTATGGGACCCTATGTGAGAAAAGTTCTGTGTGATGAGCTGGGGGCCCCAGCCAATTCTGCAATCAACTGTGTTCCCCTGGAAGATTTTGGAGGGCAGCATCCTGACCCAAACCTGACATATGCAACCACCCTTCTGGAAGCTATGAAAGGAGGGGAATATGGATTTGGAGCTGCATTTGATGCTGATGGGGACCGTTACATGATCCTAGGCCAAAATGGCTTCTTTGTGAGCCCTTCTGACTCCTTGGCCATCATTGCCGCCAACCTCTCTTGCATTCCATATTTCCGTCAGATGGGAGTCCGAGGGTTTGGAAGGAGTATGCCCACCAGCACAGCCCTCGACAGAGTGGCCAAATCAATGAAGGTCCCTGTGTATGAGACCCCAGCTGGATGGAGATTCTTCTCAAATCTGATGGACTCGGGCCGGTGCTCTCTGTGTGGAGAAGAGAGCTTTGGCACTGGCTCTGATCACCTCCGGGAGAAAGATGGCCTCTGGGCTGTCTTGGTCTGGCTCTCCATTATTGCTGCCCGGAAGCAGAGTGTGGAGGAAATTGTCCGAGATCACTGGGCCAAATTTGGCCGCCACTACTATTGCAGGTTTGACTATGAGGGATTAGAGCCCAAGACGACCTATTACATCATGAGGGACCTGGAAGCCTTGCTCACAGATAAGTCCTTCATCGGCCAGCAGTTTGCTGTGGGGAGCCATGTGTACAGTGTGGCGAAGACAGACAGCTTTGAATACGTGGACCCTGTGGATGGCACCGTGACCAAGAAACAGGGCCTGAGGATCATTTTCTCTGATGCATCTCGGCTCATCTTCCGGCTCAGTTCCTCCAGTGGTGTGCGGGCCACCATCAGACTATATGCAGAAAGCTACGAGAGGGATCCCAGCGGTCATGACCAGGAGCCCCAGGCAGTGCTGAGCCCTCTCATAGCCATTGCGCTGAAAATATCCCAGATTCACGAGAGAACTGGCCGGAGGGGCCCTACCGTCATCACCTGAATGGAGGAAAGATCACTCACCAGGGCCAAAGAGTGCGCTCAGCGGGGGACACTTCACTCATGCCTTCTTGCTTCCTGTTTGTGCCTCTTATGACTTTGAAAAAAAAAAAAAATGATTTGCTGGTTGTGGGGGGTGGGTGGGTGTAGGTGGGGGAAAAAAATCTGTTTTGTTTGGGTTTTAGTCAGTTTCTGCAATGCAACAGGGTCTTCGGTTGTCTGTGAAAGCCACACTGCCTTTCGATACCTGTGCTTTGTCACAAGAGGGAATTTGCCCTTTTGATAGAAAATAAGTGGGCCAGGAGCAGTCAGGGTATCTGTGCATCATTGGTGCCAGGTGAGAGAAAGTTCTGGAATAGCGGAGAGGGCAGTGCCAGAAGTCAGCTGACCCTAAGCCCAGGTCCGCTCAGGCAGACCTAAGAAGACTCTCCTCCTTTTCATCCCAGGTTAGGTCTCCCTTGGGCAAAAGTTGTGCAACTCCTAGTAGCCCACCTCATGCCCACCAACCACTTTATGGCCACTCACTCTCCTTCCCATCTCCAAAGTGCCTGTGCCACCCTCTTCACATCTTCTAGAGCTTTCCACAAACCACAATGGCACACTTTCAACAAAACATATCAAAGGGTGTTTTTTCTCTCTTATTTTGTAAATAGTATTAGCTATTAAGCTGGCTGCATTCCTTCAAATTCAGCCATTCATTATGCAGGCGGGAGGCAGTTTCCTGGCAGGATTCTGAGAATGAATGCTGAACATTTTCAGGCCCTTCCTTGATTATATCACATGGGTTGATACATGGGTCGATCTGATTCCCGTTGAGATGGCAAAATACCACCACATCGGCTCTCTCTCTGACTTTCTCTCACTGCTGTCTTATCTCCCAGTGAGGGTCTGCACTTGTTTGGACACTGTTCAGATCTTACTTATCGTGGCTGTCAAAGGAGACAGTGACATGCTCCACAAGTAGGAGATGAAGCGGATGCTGGAAGAGAACCTGACTGGTGGCACCGGGTGATGGCCCTAATGAGATGGAGGGGAGAGTGGGGCCCCCTGCTGGAGAGCAGAGGGTCACAACTGGCTTTCTTGGCCCAGAGAAAGGATATTGCAGCCCTGGCAGCCTCCATCAGCCCTCTCAGCCAGAAGCCTGGGTTCACGGGACCTGTTTGCGCATGTTTTGCTTCCTTGGGAACGGCAGTCACTTGCCGTGTGACTGGTGAGATAGGTTATGCGCTTTGACTGTTCAGCAGTGTGTTATTGCTGTAGTCAAGATTAGGGCAAGCAGGGAAACATCCCCAGCAAGGTGTTTGTTTCCATTTTCTATCTATGCTTCTGTCAGATACTTGCTAGGACCTTTATTAGCCAATAAAAAAAATTTCTGATTTCAGCCTTATGCAAGAATTGTGGATTTTTGCTTGTTTTGTCATTTGAGAAACTCCAGTAGTGGTCACTCTTCTGATAGGTTTGCCTTTTGGAACACTTGCAGGGCTGGTTTTCCTTATGACGACCTTGGAAATTTAGTAAATAGAACTGAGAAGGCACAATGCTCAAAACCGCCTTTCGGCATCAGAAGCATGGTATCTAACCTTTCATCACAAGTATCTTCATTTCAAAATAGTAGGAGAGTGGCTTTGAGCTGAGAGTCTGAGGAACTAGTTATAAAATTCATCAACAGTGGAATACAACTTGTCTTGTTGCTTTGGTTCTCAACATGTTTAAAGTGGAGGTCCATGACAGTCAGCATGACTGGGCACACCCTCAGGCTTAACAAAGCCTATGTTTTTCTTCAATATTTTTTTCTCAAGTTTTTGAACTTTTCATCATCTCTAATTTTGAAGTCCCCAGGTAAATCAATCCTCACTTTAAAATTCTGTTTCTTTATTTCAGTGTGGAGTCATATGTGTCCAACAGCCCAAATATGCATTCATTCATTCAGCAAGCACTCCTTGAACAACTGCTCTATGTGGCATCCTGGGTTTCTTGGTGCAGCACATGGATGCATAAGATTCTATTCCTACTCCTGTGAGTTTGTAGTTTGGAAACAGGAGGCTGTGGTAAACATGCATAAAGAATCAGGTAGACATGAACTTTACAGCAGCAGCACAAGCAACCTGCTGGAGAGTACACAGAAAGATTGACTCCGAGATGGAAGGTAGTAGGCAACTAAGGTGTTTCCCAAGGAGTGGAGATTCCTGAGCCTGATAATTGCTTACAGAATTTCGTCAGGGGTGAATGCAGCAAGAACAAGGCTGGAAATTGAGAGGTAGAATGACTGGAGAGGAGGCTTGCTTTGAGTCTAGTGAGAGGTTGGCTTGGATGAATGGGATTGAAGCAGACACAGCATTACATATATCAGACCGAGCAAATGCTTGGGTCCAGCTTCGGAAAGCAGCAGCTGCACAGCCACCTATTTTTATGAGCTTTTTCTCAGCAAGGCTCCCAAAGGGAAGGTCCTGTAGTGGCTCAGGACCCAGCCTGCCTCTGGATCCTGCTCAAATTCACATTGCCAAAGTATGATTTCTGCTCTACATAGAATCCAAGCTTCTCTTGCTGAGCTGTACGTGGATGTCCTCTTGCTTTAGCCTCAGGAGAGGTGAAAGACAGGAAGTCACCCTTCTGCACATGATGTTCCTCGTGTTCTTAAAGATGGAGCTGCAACTGCCAGTCTCACTTAAGAGTAAATGATTAGAGAGGTCCAAGAATGTTGTGGGGACTGCAGGAGATGATCCTAGAAGGGACAATGAGTAGAGTGTGGCAACTGTCTGGACCACCCTTATGATCAGCTAGTATTGAGAGATTCACTCACTACACCATATGCAACAGTGTATATAATGCAGTGATTCTCAAATAGGGCAGTGCCACTACCCACCCAGGGGGTGTTTGGAGATGTGTGTGTATATGTGCCAGGGAGGTATTTACTGGGAGGGAAACAAGGACGTGAAATATCCTGCTTAGTGTCAGCCAGCCCCCTAGATCAAAAAAGTTGTTTTGCCTCATCTGTGATTCCTGAGTTTATTGGCTGACCTTGGAAATGGATAGACAGTCATTATTAAAATAAGATCCCTTATCAATTTTACTGATCTGAGATGCAGCCCACATCTACCATATTCACGGGATGAATAGTGCTGAATAACATTGCAGGCTGAAGGGTTTGCGTGTGACCTGAAGGTTTTCCACACAGGAAGCCTCAGATTGATGACCCGTCCCACGGCGGCATAATGGGCTGACAATTGGCTGCACTGAGCCAGCGTTCTCTGCAGGCAACATAGGCAATGACAGGGTTAATGGCTTGGTAACTTCTGATTGGCCAGTGTGGCTCAATGTAAGGCATGTCCATCACTCGTGTAGGGCGTGGGGAATTTGAAACGCACCTGTGAAAACCGGTAGCGCTACAACAGGTGCCTCCATTTCATTGGTTGATCACGCACCAGGTACTTGTGAAACACATGGGAGCTGATATTCCAGATACCAGCCTTGAAGAGGGTTCCATTCCTGAGTGGTGAAGGGTTACAGAAATCATGCACCTTTGGAAATGAACTTACTGCTAGTGTTTCAGTCTTTGGCCCTTCAACAGTTAGACACAGCAAGAAATTATCCAAGGCAACAGAGCTACAGTCCATGGGGTCTCGAAGAGTCGGACACGACTGAGAGACTTCACTTTCAGTTTTCACTTTCATTCACTGGAGAGGGAAATGGCAACCTACTCCACTGTTCTTGCCTGGAGAATCCCAGGGACATGGGCTGCCGTCATATGGGGTCGCACAGAGTCGGACACGACTGACGTGACTTGGCAGCAGCAGCAGCAGAGCTCAGCTGAACCCCTGCTCCACTCGCACCGGCTGGAGACTTCAACGGCCGATGGCTCCTGCGGCTGACGGCAGGCCCACTCGGTATGTGAATC EMBV3_09334 TGAAGCTGTCATTTTACACAGGTATTTACTGGGGGCCTGTGGCTCAAGGCTGGGGAGCTG Gene BVT0102_064400 + 0 NULL GK000007.2:109097545-109327182 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214850 TCONS_00214852 1 XLOC_130780 NonCoding TCONS_00214850 XLOC_130780 NonCoding NonCoding - 7:109108008-109109697 - TSS160596 1020 3 TCONS_00214850_2 59 0.143137254901961 2 0.396919431279621 0.000583739848302741 0.000284347159461608 0.00178379905030024 0.000337034628722118 0.000106414732523409 0.000102564176371692 0.000231639162040587 0.000550834382558887 0.000596719668785619 0.0012482452185127 1.57098846713134e-05 0 8.02894157552711e-05 1.12621415095643e-09 0.000173156038726514 0 0 0 0.000377765821980768 0.000606333204341253 0.00110910655016342 0 0 0 0.00244264096859659 0.000928233806306903 0.000337917196673689 0 3.85931593121325e-08 0 XM_005199283.1 ZNF169 PREDICTED: Bos taurus zinc finger protein 169 (ZNF169), transcript 8e-09 66.2 78.75 0.0774509803921569 XM_005263731.1 ANAPC1 PREDICTED: Homo sapiens anaphase promoting complex subunit 1 (ANAPC1), transcript variant X1, mRNA. 3e-08 64.4 71.32 0.131372549019608 0 noncoding 0 0 0 0 -0.528267558179384 0.158784387693796 0.0890195254954411 0.229382911752283 TCACAAAATCCTACAAGCGCCTATCACATTGGCAGGAACACCCAAGGCTCCCTTTCAGCCGCTGCCAACCCTGTGCTGCTCTGAGCTGTGTCCCAGCAACCACAAACTGGCGATCCTGAGAATCTTTTGGTTCCGAGGCTCCCTTCTGCTCAGGCCAGGAAGAGCACTCTTCTCAGAAACTGACTCTGCTGGACCTTCAAGCAGAACTTCTACCCTCCAGAATGATGAGAAAGTAAACTTCTACCCTGTAAGCCAACAAGTCCGTGGTATTTTGTCATGGAAGCCTGAGGAGGCTAACACAGGCCGTTTGAAAGTTAATTAATGGTAGAGTTGAGGCTGTGTGCTATCGAATCACATCCCTGCCAGGGACTCCAGAGACTCAGAACCACCGAATACCAGCAAGAGAACAGTGGCCAGGAAGAGGGGGAGCAAGGGAGGCCCGAGAGTGGTGGGAAGGCCTGACGGCAGCCCACACTGCCCTGCACGCCGCAGACACTGGATGTCCACCTGCTGTTCTGAGCAAGTGGCTGGTCTGAGGGGAGATGCCACATTACACTCCTGCGTGAGGATAGTTCCACCTCTGAAATTAACTCATGGCACCACGAAAATGACTGTATTATCACCCAGCAACTGTGTTATCTCACTGTTTCAGCAAGGCTTTCACCCAAAGATAGAATGAAGGGTGTTAGAGAAAAGTCACATACTCCATTTTAGCTTTCCCCAACCCTGGAAATTAAAGCAGAATATGCCACCGCCTTTCAAAAAAAAAATCATATTAAGTGCGTTGTGGGGACCAAACACACCGTGAGGTACTTTGTTAACACCAGAACACATGAAGCTGTCATTTTACACAGGTATTTACTGGGGGCCTGTGGCTCAAGGCTGGGGAGCTGGGGAACAAGGGTATTTTGGTTCATCACATAAAATGGTTTTATACTACTTAGTATTATTTCCTCCCCACACTCATTAAAAGCATATTCATTCATACAGCTGGATCCTCTATTTACTTTTATAGCCTGG TCONS_00218287 r 3' 1210 TCONS_00218287 r 3' 2898 EMBV3_25656 GGCCAAGAACGGCTCTTCAGGAAAGAAGTCTGACTCTTCCCGGGACGACGAGAGCAAAGA Gene GeneID:783703|LOC783703:XM_002688213:97_cdna Constitutive 0 NULL GeneID:783703 6 GENE LOC783703 NULL similar to Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox) EMBV3_22129 ATGGGGCAGGGGACTGCTTACAGGGCTGTAGACCACGTGTATTCTCTTCCTTGGCTTCTT Gene BVV0102_169742 + 0 NULL GK000015.2:30406074-30414471 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058785 TCONS_00058780 TCONS_00058786 TCONS_00058782 TCONS_00058781 TCONS_00058779 TCONS_00058783 1 XLOC_036194 Coding TCONS_00058786 XLOC_036194 Coding Coding CBL 15:30315452-30414488 j TSS44209 11037 1 TCONS_00058786_2 809 0.00271812992661049 17 0.888726207906296 0.00400572810497787 0.00433111273479918 0.00254563626853819 0.00295573780676881 0.00292952434670643 0.00149288920743034 0.00236768799621075 0.00307496615910275 0.0033321713912902 0.00108918459533359 0.000204398897715068 0.00029616016782117 0.000453787453579272 0.00107879945917642 0.000803186984062846 0.00146190905983852 0.000102552580045465 0.000389938435761879 0.00346983089126271 0.00307971810711524 0.000572854621347565 0.000878079003986055 1.14761606462237e-07 2.5322093091412e-09 0.00553028399547015 0.00397734679380596 0.00307154777872601 1.73003279538021e-09 0.000219993053533032 0.000571357561435721 XM_605809.6 CBL PREDICTED: Bos taurus Cbl proto-oncogene, E3 ubiquitin protein ligase (CBL), mRNA. 0.0 1.700e+04 100.00 0.854127027271904 NM_005188.3 CBL Homo sapiens Cbl proto-oncogene, E3 ubiquitin protein ligase (CBL), 0.0 5918 77.97 0.660777385159011 TCONS_00058786_2 sp|P22681|CBL_HUMAN CBL_HUMAN E3 ubiquitin-protein ligase CBL; 0.0 1459 92.23 0.99876390605686 6 coding 0 0 0 0 -0.0388707768452307 0.712931106945283 0.0665952280884428 0.28510241170764 GGGAGGGGGCGGTGAGGAAGAGCGCTTGATTTACCGGCTGGGACTGAGCTGGACGGGCTCTAATTAGGGAATTGGGTTTTACGGGCTCTCATGGAGAGACCTGGGGTCCTGACAACTCCGCGGGCAGACTGCTCTGGGTGGTGCGGTTGTGTCAGAACCCAAAGCTGGCGCTAAAGAATAGCCCACCTTATATCTTAGACCTGCTGCCAGATACCTACCAGCATCTCCGCACTATCTTGTCAAGATATGAGGGGAAGATGGAGACACTTGGAGAAAATGAGTATTTTAGGGTGTTCATGGAGAATTTGATGAAGAAAACTAAGCAGACCATAAGCCTCTTCAAGGAGGGGAAAGAAAGAATGTATGAGGAGAATTCTCAGCCTAGGCGAAACCTGACCAAACTGTCCCTGATCTTCAGCCACATGCTGGCAGAACTAAAAGGAATCTTCCCAAGTGGACTCTTTCAAGGAGACACGTTTCGGATTACTAAAGCAGATGCTGCAGAATTTTGGAGGAAAGCTTTTGGGGAAAAGACAATAGTCCCTTGGAAGAGCTTCAGACAGGCCCTTCATGAAGTACATCCCATCAGTTCTGGGCTGGAGGCCATGGCTCTGAAATCCACTATTGATCTGACCTGCAATGATTATATTTCAGTTTTTGAATTCGATATCTTTACGAGACTCTTTCAGCCCTGGTCCTCTTTGCTCAGGAACTGGAATAGCCTTGCTGTAACTCATCCTGGTTACATGGCTTTCCTGACATATGATGAAGTGAAAGCACGACTCCAGAAATTCATTCACAAACCTGGCAGTTACATTTTCCGGCTGAGCTGTACTCGTCTGGGTCAGTGGGCTATTGGGTATGTCACTGCTGATGGGAACATTCTCCAGACAATCCCTCACAATAAACCTCTCTTCCAAGCGCTGATTGATGGCTTCAGGGAAGGCTTCTATTTGTTTCCTGATGGACGGAATCAGAATCCCGACCTGACAGGCTTATGTGAACCAACTCCTCAAGACCACATCAAAGTGACCCAGGAGCAATATGAATTATACTGTGAGATGGGCTCCACATTCCAACTGTGTAAAATATGTGCCGAGAATGATAAAGATGTGAAGATTGAGCCCTGTGGCCACCTCATGTGCACATCCTGTCTAACATCCTGGCAGGAATCAGAAGGCCAGGGCTGTCCTTTCTGTCGATGTGAAATTAAAGGTACTGAGCCCATTGTGGTTGATCCCTTTGATCCTAGAGGAAGTGGCAGCCTGTTGAGGCAAGGAGCAGAGGGAGCTCCCTCCCCAAATTATGAGGATGATGATGATGAACGAGCTGATGATTCTCTCTTCATGATGAAGGAATTGGCTGGTGCCAAGGTGGAACGACCTCCTTCTCCATTCTCCATGGCCCCACAAGCTTCCCTTCCCCCAGTGCCACCACGACTTGACCTTCTACAGCAGCGAATATCTATCCCTTCAAGTGCTTCTGGTCTTGGAACTGCTTCGAAGGCTCCTTCTGGCTCTCTTCATAAGGACAAACCATTACCAATACCTCCCACTCTTCGAGATCTTCCACCGCCACCCCCTCCAGACCGTCCGTATTCTGGTGGAGCAGAAACCCGGCCTCAGAGACGCCCCTTGCCTTGTACACCAGGCGACTGTCCATCCAGAGACAAACTGCCCCCTGTCCCCTCTGGCCGCATTGGAGAAGCATCATGGCTGCATCGGCCAATCCCCAAAGTACCAGTAGTTGCCCCAAACCCTAGTGACCCCTGGACAGGGAGAGAATTAACCAACCGGCATTCACTTCCGTTTTCATTGCCCTCACAAATGGAACCCAGAACCGATACGCCTAGGCTCGGAAGCACATTCAATCTGGATACCTCCATGAATATGAATAGCAGCCCATTAGCAGGTGCAGAGTGTGAGCATCCCAAAATCAAACCTTCCGCATCTGCCAATGCCATTTATTCTCTGGCTGCCAGACCTCTTCCTGTGCCAAAGCTGCCTCCTGGGGAGCAGTGTGAAAGTGAGGAGGACACAGAGTATATGACTCCTTCCTCTAGGCCCGTGGGACTTCAAAAGCCAGACGTGAAGTGGCCTCCGGAGATAGCACAGAGTTCACGAACGTGTGACTGTGACCAGCAGATCGACAGCTGTACATACGAAGCCATGTATAATATTCAGTCCCAGGTGGCGCCGTCTGTCACAGAGAGTGGTACCTTTGGTGAAGGGAATTTGGCTGCAGCCCATGCCAACACTGGCCCTGAGGAGTCAGAAAACGAAGAGGACGGGTATGATGTCCCCAAGCCACCCGTGCCTGCGGTGCTGGCCCGCCGCACGCTCTCCGACATCTCCAACGCCAGTTCCTCCTTTGGCTGGCTGTCCCTGGAAGGTGATCCCCCGACACACTTCACTGAGAGTGCCCAGGTTCCTGAGAGGCCACCCAAGCCGTTCCCTCGGAGAATCAACTCTGAACGGAAAGCAGGCAGCTGTCAGCAGAGCAGTGCTGCCGCCTCGGCCGCTGCCTCCCCGCAGCTCTCCAGCGAGATCGAGAGCCTCCTGAGTCAGGGCTACTCCTATCAGGACATTCAGAAAGCCTTGGTCATTGCCCACAACAACATTGAAATGGCCAAAAACATCCTCCGGGAATTCGTTTCTATTTCTTCTCCAGCCCACGTTGCCACCTAGCACACCCCCTGCCTGCTGCAGCTTAGAGGACCGAGGAGCCGGGAGCTCTTGCTCAAGTAGCACCCAAAAGGGCGGCTAGGTTCCTTTGGAAACTTCACAGTGAGATCTTGCCCTATCTGTGGGGTATCACATCTGTGGTTCCAAGATTTCAAAGCAGTGGACTGAGGACGGAACACCTAGGAGGCTTGATTCTTTTCTTTGTTTTAAGAGTGCATTTGAAGGTGTCCTTCAGTTCCCACTTGGAAAGAGTGGATTTTTGTGAAATGGTAGCCTACCTGGGGAACAGTCCAGAAAGCAAAAGTACTGTGCTGTAAATCCTAATTGAGGACTTAAGACTTTCTTGGGTTAAGGATATGGTTGTGTGCGTTTTGTCCGTCTGTCTGTGGTTGTGTGTGTCCTGTGATTATAAGATTAACCTGCTGTGTGTGTAAATTCCAGGCGGGGAATTAGCACAAGAGGTTTAGGAAGGAATCTTAAAGACTTCCATCTACTGTGGTTTTCTCCCCAACCCCAGTGTGTGTTACAGCTCAGACACTCCCCTCTGGCTTGGATTACCATGTGCATAGCTGAAGTCTTGTATTTTTAGAACACGTCCCCCCGCCCCGCTCTGTCTTTTCCCTGTCTCCTCCGCCCTCCTCCTCCTCAGTGTCCGTCATTGGCAGTGGGCTTGCTGTGATCAGCCTTACTGATGCCAAGCAGCTTATAGGATGTTCTTTATAATGTGTGATGGTGTTGGTTTGTTTGGTAGATAGATGGGAAAAAAGTACTGTTGCTCTGTCATTATGGTCCTGTTTGATACTCGAAGCGAACACTGGTCACTCCAAAGCACTGTTTCTATAGGAACATTGAATCTGTTTTTAAAAAGATGTTTTAATTATCATAATTACATAATGACTGATATGAGATAGAGGCCTTCAGATACATTCCATGCTCTCCCCAGAAAGTAGTCTGCGGGAGCCAGTTGCCTTGGTGCCAGGTATGTGTTCTAATGTAGGTCATGAGATTTTCTACTTAATGGAAAGGGGAAATCATTTGTTTCCGGCATGGCTTTCTGGCCCAAATACCATGAAGCACTTAGGAAGCTCCGTTCACACGCTCTCTACCTTGTTATACATAAAATGCACACAGCAGACAATAAGGATTTCTCTCTTCAGCTTTTCTTCCCAGTGAATTTCAGCTTATATGGGTGTCTCCCTGTGATGATGAGCCAGGTTATATTTTCAGAGATGAGTGTTTTCTTTGCTCTTTACGGAGTCAGGGGATATCACTCCAGGGTAGCACAGCATTCTGCTGACAGTTAGCACCAACCCTACACTGGTGCTGCCTGGCGACTCGCTTTTCTCTTCGTGCCTATGGCTTTGGGAATGTAGCATTTCCTTCTTCCTCCCCGTCCCCTTTCTTTTTCCCTTTAGCTCTCAGATACTCTTTAGTGACTGTGTTCCCTATGGTCTTTAGACATCACTGGTGTAATCAATGCCTTTACTGCACTCAGACAACATTGACAAGCCCTGCAGCTTGTGCCCTTGCCAGCTGGTAAAGAAGACTCAGAGTTCGTTGGTCTGTTCCTGTAGATGCTGCCAAGGGACCTCTTGATTTCAGTTAGTTCTCCAGCCTGAGCCTTTTAACTGACTTCCCTGGCAGTGGGTAACCTTCCTCCTGGTCAGAAACAAGCCTGCTCCTTGATAAACCCACCTGCCTCACAATCTAAAACCTGGTTTTGTCTCACAATCCAAACAGAAATGACTTTGCATCTGTTTTCTTTCCCATGTTATCATCTTTGGACTTAAAGCTTTTTCTAACTCTTTTCTTAGCTTTCAGTTACTCCTAGATCTTTTGTTTTTCTCCTCTTGCCTCCGAGCCATTTACATTCCCAGAGTGGATGGTTTGGGGATTCTTGCTGAATTGCCGTGGTTACCCAGTGTCTTCCCTTTATGGCAGAAAATGACACAGCCCCCAGCAGGTGCAGGAGGGCCTGAATCCGGGTGGAGGGGGCAGAGGAAGGCGACAGAGAGTAGGAAAGAGGAAGCTGGTGTCTCCCGCTGAAAGCCAGTGTAGAGCTTCACTCGTGGCAGCGCTCAGTTTTGCACTTTGTTCAGATGTGGAAGGCCTAGGTGAGGAACTGGAAAACATGGCGGCAGCCTGCATGCCTCTGCTGCTGGAGATTTTCCTCATCTGCAGATACTGCCTGTAGCCTGAAGATCTGTCAAGAGAAGAAAGCAGTGGTTCTGCAAATCCTTTGTCTTTTCAAAGTGCATGCAAAGTCTTCTTTGAAGATTATGTCCTTACTTATATACGCTAAAGGCAAGCTTATCCTTTTTTTTTTCATAATGATTCATTGGGTCATTCAGTACTCAACAGTTCATTGAGTACCTGTGTGGTTCATTGGGTCAGCCCTCAGACTCGGTGTTGAACATATGCACCGTTACTTGGCCTGGTTCTTAGCTTGTCGGTTGTTTGTCTATGGGCACTCAGGGTCTCAGACCTTTCTGTGAGAGGTTCCTTTGGGTGCTCTGAGTTCATGCCTGGGTCTGAGCCTGAGATTGCTGGGTGAACCTCAGGCAAGTTTTTGCATGGCTCTTGTTTTGAGGATATTTCCAAAACCCTAATTTCTTAAATTTTCCCTTGAGGCACCAGTCACCCATGCTTCATCCTCAGTTTGTGTGGCAGTTTTTAATTCTTTGGTTCTGCTCTGAATTTAACTAAATTGCCCTTTGACAAGTGGGCTTTGAATGTTGCCGTTTGGAGCAATCACATCCCCTTTCTCCCTCTAAATTACAAATGGTTCCTCCTCTGTTAGCTATCAGGTAAGTAAGGTAAAAACCACTTTGCTGTTTTCCCTTTGCTCAAATTAGGCTCTTCGGTTCAGCCCTGCTTCCCCATGTCTCCCTGGACTGCTTTCCACAGCCCTCCTTGATGCTGGGTGGCTGTTTCATCCACTGCCCCTGCCATACTCCTTTCATTAAAGTCAGGGGTTCTCAAGGTGGAAAAAAACCTGTGGGCTCAGTGATACACCTACCTCCCTTTAGGTAAATAGTAGATTTGGCAGTCTGCCGTCTCAGCATTTATCTGTTACTACCAGTAGTGGTATATGCCTGTGGGTGGCCATGCTGCCCCTAACTCTCTTTGTGCCCCTAGCCCTGCTCTGCGTGTTGTGCCATCCTTCGGTTCTTTTGCTTCTCATGCAGACTCTTAACACCAGGGCCCAGGGTGTGGGATAGTACTGCTAGTATCATTTAGCTGTTTTGTGGATTTAGAAGAAAAATTAGGGGGGTTGCTATTTCTCACACTTAAAATATTTATTTCCTCTGTAGAAAAGTAAAATATATTTTATGGTCCAATCAGAAACCTCACACATGAATTTTGTATATTTGCTTGCAAAGTAGGGACCAGCTGTATGTTCCCTTTAACAAGATCTTGATCTTTTTGCATGTGACCAGCAATGGTGTTAGTGCAGAATATTCTCCTACCTCACGTCATGAGAGGCAGAGGGGTACAGGCCGTCTTCCCAAACTGTAAATCTCCTCTCTTGCTGTTGGCCTTTCTGACTCTGCAGTGACCACTGCCCATGGAATAACGATTCTGACCATTGGCCTGGCTCTCACAGAGTGTGTGTTCATTCAGCAGGTAGTTCTGAGTGAAAACCATGAGCCTGGAGTGCCAGCTCTGTGTTCTCCCTGCCACCACAGGGCGGTTTACTGATGTTGAGGAATTGTGCTTGGACTGTCTAGCATGTGCATTTGGCCCTAAAATGCCCATTCCCAGTTCACTTGTGCAGTTTATAGTCACAGCTCTGTGCAGACATACGTTTCCTTATAGAGCTGTCCTGGTTAAGAATCAGTTCAAGATGCTCCCTTTAACCCCTGTTATCTTCCTATAGTTTTGACAATGTCTGGGAGATTCCTCCATGTAAGTCTCATGGATTACCCACCATTTTTATGTGTTTACAGCCTGTTTGGTGGGTCTGTTCATCGGCTCAGAGTTGCACAGTAGGGCAGTCAAATGTTTAAGGAAAGCATCTGCCTATAGTCCCCTTTCCACTCTAGTGCCTTCCTTGATCTTTTTACTCAGCTGCTTGTATTCCTATTTCCCTTTATTAGGAAGTTTTCTTAGGACCCTTCTAGGTTTTCAATCATTCCACAACCTTTCTGCTAATCCTGTGTCTCTTTAGAAGGGCTGAAGTTTCGAGAGGAGGATGAGCACCTGTCTCTAGGTCCTGATGGTCCACCAGTTGTTTGGTCTCCCAAGAGCCAGGCAGTGAAGTAGACTGAACTCAGTTCTCAGAAATGTCAGCCTATATAGGAGTATGGAGCTTAGAGACCCTGGAACTTAGTGTAAGAGTCAACACGTTATTCTCCTCCTGGATTTTCAATGCCCTAGAAATTTGATCTGAAGTATTCTCAGCATAAAGCATTACTATTACTTTGATCTCAGTCTACATTAGCAGCCTCATGTTAGAAATGCATGTTGCCACTTAATGCATGGAGGAGGGTGCATAGTGGAAGAAGGTCAAGGCTGTATATTTGACCATCCTGTTGAGCAGTCCTTCGGATACAAGAAACAGAAGAATTCAAGTAGAAGAAAGGAGGGAGTCATCAGGATGCAGAGTATCTCCCAGAACCCAGCGAAGCAGTACAGTTGATTCTGCATGGAGCAGAGAAACTTTGCAACTTGACCTTTCTCCTCCAAGTAAATCTGTTTGTCAGTAATGTGTGGCCCTGAAATCAGAACCCTAGTCCTCAAGTCCTCATGACCCCCCAGTTTAGGATCCTCGCTTTAACAGATACCCAGCTCCTCTTGTTCATATTCTCAAGGAAGCCTGTCATCAGCCCAGCATATTGATCAGGTGTGAACACCCAACCAGTCAGCCTTTGCCACACAGGGCAGCAGCCGCATGTTCAGGTGAGAAGAAGGGGCAGTGGGAGGTTCTGACTGGAGGTGAGAGAGACCCTAAATCATTTTGGGTTGGCCAAAAAGTTCGATCAGCTTTTGTGTATGATGTCATGACATGAAAACTCAAATGCACTTTTTGGGCAAACCAATACTTCAGTAGTAAAGTTTACCATACTGCTTTCTCGAGAGGGGAAAGGCAGGCGTGGGACTGTATCTGGGACATTGAAGAAATGCTTAGGTTAACGTTAACTTGGGTTACTGTCTTCACTGCTTCTTTATTGCCTGTTTTTCTTTCCCTTATGAGGCCTGGCATCCAAGATTTCTTCCCTCTTTCTTCAGGACCCGTTTCTTCTGTTCCAGAGCTAGTCTGTCCTTAGGTGACATTTCTTAGCCTTCATTTAATCTCAGGTTTCTGGCTGGCTTTCATCTTCAGAGAGCAGATCCCAAACCCCCTGTCGCCCCTGCCTGTGGACTTCTGGGCTCTCTTCAGGTTTTAGTGCTGAGAACATCCTCATTCTCCAGGCGCGTGGCCTCAGTCCCTCCACGCCCTCCTCCCCGCCCTCTTATCTAGTCTCCTCTGCAGTGATGTCCTCAGGCAGGCCTTCTGCGGTACCTCAGAAACTACTTTGCAGTGAGAATTTATGACACTGGGACAGTTGCCAGGATGTGAATTAGGTATAGATTCCAGTTGAGAGTTGCTCCTGAGAGCTCTTTCAACAGGATGCATCTGTCCTCTCTGTCCGGTTGCTTCCTTTGTCATCCTGTAGTAAAGCCTTTATTTGTTGGTTTTTTAAAGCCATGCTTCTGCTTGCCTGAATCTTCTGATCTTATTTCTCTCATCCCAGAGCCTGTCCCTTGTTATTAATGCATTTCATAATTACTTACAACTTTTTAAAATTACTGGAGTCATTTGATGTACATTGAAGTCGCCTAATAATCCAAAGATACACACTGAGGCCCGTGGTAAAGGCTGGGGCCTGTGTGTTTGAAATTCCTTCTGGGCTCCAGAATTCAGGGGCAGAGGGACAGCAGTGCCACTTGGCTTCACCGAGTCCTAGGAAGTCTGGGTTGGTTTCAGAGAGGGAGCACCAATGTTTCTTATTTCCGGAAAATAGCCCAGGAGTGAGTGGGGGAGTCGGGGTGGGGAGAGCCAGGCCTGCCTGGGGGCCTCCTGGCAGTCTTCTGGAGAACACAGTGCCAAAGGGCCAGCTGTTGACTAACAGACTAACAACTGTTTGGACATCTTGCTGCCCCTTCCTTTGTTCAGTGCTTGAGAAAAATGTAGCTGACCACTCGCTGTGTGTGTAGAGAGCAGAGGCTGAACGCCAACCTACTGATCTGGCAGTGGAACAAATCAGAGTTCTCATGCCCGGCCCCAGATTCTTATCCAGCCCCCAAAATGTGAGAGGCGCCCTTCACAAATTCTCCTCCTGCCGCTGGATCACTTTGGGAGGCCAGGGGATCCTGCTCGGTACCGGCTGGCTGAGCCTCCGCAGGCCTGGCGCCGCTTCCGTGCTGGGCCCCGCGTTGGCGGGGTGTGTGCCTGCACCCAGCACTCTGACATAGGTGCTAGCGTGCCCTGAGCGTCAGTCCCTCCTCCCCACCTCCCTCTGACCGCGTTTTGTGGCCGAGGAAGCTGCGCTTATGGCTGTCTGGAAGCTGATGGGGCAGGGGACTGCTTACAAGGCTGTAGACCACGTGTATTCTCTTCCTTGGCTTCTTCCTTCTGCTGTTGGGGTGAGTGAGCCTGCAGGCGCCAGGCCCACGAGAGTGGATGCCTCCTGACCTGCCCGTCTCATCCTCGTTCTAGTGTCTTGGCCTTGGCCTCCTGCTGAAATGTGTGGCAGGGGCGTGGCAGCTAGGAGGTACCTCCTCCCTCTGCTTTCTGGCTGTGGTGACTTGGTATTTTTAACCTTATATATCTTTTTCCTTTATTCAAAACAAAACAATTTTTAGCACACTGAAAAAAAAAAAAAAAAAAACCAAACATTTTGTGCCTTTCTAAGGCAGCACTGTATCCCAGGCTGCATTTTAGGACTTAATATGGAAATACCAGAGTCTTAGCTCCTCTACCTTGAGTGTCATTAGTTGTCTAGTCTGGGGGAGAGGAAGTGTCTCCGTGCGGCCGGCGGGGTGGCACCCAGGTGCAGCGGGTCAGCGCTCCCTTCTCCCAGCCACAGTGCTGAGTTGGAAGAAACAAGCATTGTACCCCAGGATCGTTTGGTTGGCTCCACCAGGTGTCCTCTGGACCGTCTCAAGTGACGCAGCCTCCCGATCCTGTCAGTGACCCACCTGCATGGAACAGTGTAGGGTGGACTCCCAAGAAGAGGCGGTTGTCTGTCTTGTCTTGTCTTGATGCTGGATCCTGAACTAGCCTAGACCTCCTGCCTCTCTCTTAAGACTTGGCTTTCCTTTCATTTGAAAACTTCAGTCATAGAGCATTAAGCAGATGGTGCCTCTGCAGGGGCGAGTTTTCCCCTGGGCAGGGCGGCAAGGACCACGTACCGGAACAGAAGCCTGTCCTCAGTATAGTGGCCACTGTAGGTTTCAACAACAACTAAAGTTTTCTGTATAATGACGTTTTACTTGCCTCTTTCCCTCTTCTCAGCTCTTCCTTGCCTATAACTTAATAAAGAATTGGGAGATAGAAACAGTTCTTTTCAAAGTCCTCCTTATTCAGGATTTTGACATTCTTGGCCTGGGTGGGGCTGGAGAGAACTTGATGCTTTCTCCAGAATGAAGAGTCCCATTTGTATATCAGTGTTAAAAATAAAACAAAATGAAACCTTAGATGAGATTTTTGTGGACTATTTTAAAAATGTGTCATTAATATAAAAAAATTATATTAGCAGTATTTAATCATTCTCACCTGTAAAGAATAAAACAGAAGGTAAATATTCTTACAGAGAATAGCAGAGCTTTAAGAGTCATTTTCATTTTAAGTCCATTTTGTTTTGCCAATGTATTAATGTTTAGAGGTTCTGTTATACTAATGTTATTTATTAATTTTTTTCACTTCCATACACAGTTAACTAAAGAGCTTTTTCAGGCACCCATGTCTGTAAAAAATATTTTTAAATAAAGTTTCTTTTGTTGTAGCAGACCAGAGTTCTTGCTCATTCCTGGGTCAGGGAGTAATACATTGGGGAACTATAGGGCCAGATGTATAACCCCACCAGTTCATCACCAGACGTCCGTTCTGCTACCTGGAGGGCCGTCTAAATGACAGGAAAGGGGCAAAAACTCTCTGCCGTCAGCTCACCAGGCTCTGCAAGCTGGTGATCAGGGCAGCTGTGCTGCTAAGGAGCAAGGTTATCCTCTGTGTTAGAGCTCGAGCCCCCTGCTGAGAAGCAGAGATGCCCTCTGGTCCCCGCTTTTTGGCACGGTTCCAACTGCAGGCCCCAGGCTGCTGTGGTACCCATGATGAATAAAAAACTGTAAGATTAAGGGACAATTAAGC EMBV3_11168 GGGACCCCAAAGAAGTTTAAGAAAGCTCAGAGAGTCTGCAGGAAGTGCTACCGAGGCAAC Gene GeneID:783660|PRG3:NM_001098472:34_cdna Constitutive 0 NULL GeneID:783660 15 GENE PRG3 NULL proteoglycan 3 EMBV3_01408 GAAGGGCAAGATCACCTTCTGCACTGGCATCCAGCTTGGCTGATGCCCTCATCAGCTCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11631 CCAGGACCAGGGCAGATGATGGGGTTGTTGGAGAAGTGTGTGTTCTAAAAAGGTGAATGA Gene BVV0101_022641 + 0 NULL GK000019.2:54045167-54078897 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35692 ATCCTGGTTAAGTCCATGCTGAGAAAGCGTTCCTTTGGCAACCCGTTCGAGCCCCAGGCA Gene GeneID:510260|CAMKK1:XM_002695753:207_cdna Constitutive 0 NULL GeneID:510260 19 GENE CAMKK1 NULL calcium/calmodulin-dependent protein kinase kinase 1, alpha EMBV3_43535 CTAATACCTATCTTTATAGTGAGGGTTTCCCATGTGGCTCAGGGTACAGAACCCGCCTGC Gene GeneID:100144618|CTCFL:NM_001123365:665_cdna UTR3_Alt 2 NULL GeneID:100144618 13 GENE CTCFL BORIS CCCTC-binding factor (zinc finger protein)-like EMBV3_41414 CTACTCTTTCTTCCTGGGATGTTTTGGAGTAGATCGTTTCTGCCTGGGACACACTGGCAC Gene GeneID:507906|TM2D2:NM_001038056:41_cdna Constitutive 1 NULL GeneID:507906 27 GENE TM2D2 MGC133974 TM2 domain containing 2 EMBV3_43675 TTTGAAAAACACTTCAGACCTCAGGCCCTTTGCTCTGGTGGAGCTCCCCCGCAGTTCACT Gene GeneID:784572|LOC784572:XM_002700336:77_cdna Constitutive 0 NULL GeneID:784572 X GENE LOC784572 NULL similar to Family with sequence similarity 48, member A EMBV3_20694 CCAAATCCTTCACGTCTCCCTGGGACAAAAGTTGGTGGCAGCCTACGTCTTAGGGCTCCT Gene GeneID:506163|MOSPD3:NM_001034265:98_cdna Constitutive 4 NULL GeneID:506163 25 GENE MOSPD3 MGC127964 motile sperm domain containing 3 EMBV3_21526 AGAGGGCGCAGCATCAGAGGCTCCTGGAAGGTAGATGCTTTCTGTGATAATAGCCATGGT Variant GeneID:615884|LOC615884:XM_002699569:94_cdna 92^276 1 EMBV3_21389 GeneID:615884 X GENE LOC615884 NULL similar to Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) EMBV3_20643 AGCACCTCCCGAGGGACAGGTAACTCAGTTGATCCCAAGAGCAGTGGAAGTAAAGATACA Gene BVT0102_049708 + 0 NULL GK000021.2:59450334-59496448 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119911 1 XLOC_072999 Coding TCONS_00119911 XLOC_072999 Coding Coding PPP4R4 21:59398008-59492986 j TSS89670 1530 1 TCONS_00119911_1 150 5 0.983943481053308 0.00200157786609419 0.00207280069964951 0.00194186025673094 0.000893038393572495 0.000752293931240073 0.000395907498617464 0.00093372658549603 0.000715917402356127 0.00183712502134011 0.000108160275042933 1.88298214575322e-05 2.28542050392363e-05 0.000114785402873223 0.000261616040780947 0.000705398203766206 8.63122402646722e-05 0.000115483675483162 1.63992822379764e-05 0.00178524690478024 0.00309754748889874 0.00110436708604445 8.58141023521225e-05 0.000131781608255191 0.000262974606876544 0.00206607543944658 0.00186357823116526 0.00252709317925828 1.16958107340217e-05 4.63699245209591e-06 7.85914396490911e-05 XM_005196312.1 PPP4R4 PREDICTED: Bos taurus protein phosphatase 4, regulatory subunit 4 (PPP4R4), transcript variant X2, mRNA. 0.0 2214 100.00 0.801307189542484 NM_058237.1 PPP4R4 Homo sapiens protein phosphatase 4, regulatory subunit 4 (PPP4R4), 0.0 1409 84.71 0.801307189542484 TCONS_00119911_1 sp|Q6NUP7|PP4R4_HUMAN PP4R4_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 4; 4e-57 192 81.30 0.8 0 coding 0 0 0 0 0.0978225113670752 0.521282315307146 -0.0197258245773152 0.681834026984272 ATGCATCCGCCGTCGCCCGCCGCCGCCGCCGCCGTGATGGATTTCAGTCAGAACAGCCTGTTCGGCTACATGGAGGACCTGCAGGAGCTCACCATCATCGAGAGGCCGGTCCGCCGGAGCCTCAAGACACCAGAAGAAATAGAAAGATTGACAGTTGATGAAGACCTCAGTGATATTGAAAGGGCTGTTTATCTGCTCAGTGCTGGTCAGGATATCCAGGGAACAAGCGTGATTGCGAATCTTCCATTTCTGATGCGACAGAACCCTGCTGAGACACTTCGGAGAGTCTTGCCAAAAGTTAGAATGACTCATTCCGGATGCGTAACACCAATAGCGCTCCCAGTTCCTTTTCTTCTAATACTTCCCTGCCCAGCACCTCCCGAGGGACAGGTAACTCAGTTGATCCCAAGAGCAGTGGAAGTAAAGATACACAACCACGGAAGGCTACCTTAAAATCCAGAAAATCCAATCCTTAGGCCATCTCCTTGAAGAAGGAGGCAAAACAAAGACAACTGGAGATAATGTGATTGATGAACAAAAGCTAAAGCAATGGCTGATGACTGGAAAAGAGAGATACATAATGGCAGCTGATGTTGTTAAACGTTCCATATTTGAAATTATATTCCCTAGGAGGTATAATATATATTTCTTGAACAATAATGTGGTTACAGAATTCCAATGTTATAGTGAAGTGTAAGGAAAAAAAAACCATTAGGTATGTGCTTTAACTACTGCTACAAAAGAGATAAGTCTGCATTTATTTGTGCAGGAAACCATCTATTTAACTGTGCTAGAGTTTAGCATTTAAAAATTGTACGAAAGGCCCAAATCAACTGAAATCACCCCGCCTAGATAATCACTTGGACGGGGACGTGGGAGTAAAAAAGTCACTGCATTTTCTCACGAATCTCCAAGCCCAATAGAAAAGTCACACTGAAACAGGGTACAAACAGCTGTCCTAAATTATATCAGTCCTGCGATTGTGGTGACAAGATGTTGTACCTGGACATTCCGAAATTAAAATTTGGCAATGAAAATTCTACAAAGATTTCTGATAACTTTTAGCTACAACTACCTTAAAAATAATAGATTGATGATTTCCTTTGTTACCTAGAAGAATTTATTTTATAAATACTTTGTTTACATTTTAGATTGTATTTGTCCTTACTGAATTAGAAATGATGAATCTAGTTTGAATCAGCTGTTATTCCAAGCTATCATGCTTAAGCTATGTCAACAGCATTTATTTGTACTAATGCTATTATTTCCATCAAAATTTGCCTGTGGAACCTATACAGTTCTTGATTTTAAAAATGTCAGTTCTTGAGATATACTGTATGAAGCTATTGTCAGCTTCTCTATTTCAAAATGCAATCAGCATATAATTATATTGATATTGAAAATATTTGTTTTTTTAAAAAAATATATTGATGTATGATAAAGATCTAATTTGTGAATGCATATGCGTGTGTGGTTACTTTTTATAATGTGAAATAATGAATAATGAATTTACTCAAAATAAAACATAGG EMBV3_40867 GGCGCACTCATGTGGGTTCATTCCCGTTTGTGTTCTGGGTATTATGAACCAGTGAAGCCT Gene BVV0102_410727 + 0 NULL GK000025.2:38495057-38509854 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31734 CGTGACCGTGTCCATGGCCTATGTGTACTTTGAGAAGCTGGTGTTGCAGGGTAAGCTCAA Gene GeneID:529805|CABLES2:XM_002692411:368_cdna Constitutive 0 NULL GeneID:529805 13 GENE CABLES2 NULL Cdk5 and Abl enzyme substrate 2 EMBV3_15464 AACACCTGTGCCTAACATGCCTCTCTAGCTCCACAGCTCCAGCCTTAGTGTTTGGAGTCC Gene GeneID:540401|PYGO2:NM_001102242:201_cdna Constitutive 1 NULL GeneID:540401 3 GENE PYGO2 MGC159447 pygopus homolog 2 (Drosophila) EMBV3_41512 TGGGTAAGACTAAAGCTGTCTTCAAGAAAATTGGAGATATCAAGGGAACATTTCACTCAG Gene BVV0102_056588 + 0 NULL GK000009.2:8456471-8690039 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22415 GCAGCGCCGGGGAGATTACTTTTCTGGAAGCTTTGGCTAGATCAGAATCTAAAAGAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40260 AGTACAACTCTATGACCAGCTCGCAGACCTACATGAACGGCTCGCCCACCTACAGCATGT Gene GeneID:784383|SOX2:NM_001105463:67_cdna Constitutive 0 NULL GeneID:784383 1 GENE SOX2 MGC148683 SRY (sex determining region Y)-box 2 EMBV3_31102 TGCTCAGACCTGTACCTGGAAGGTGGAAAGGCTGTTTCTGATGCTTGGAAGCTATCCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12667 AAAGGGGCTGAGGAACCCACTGGCGCCCTTTCAGTCTCTGCCTTGCACTTGGAGGCTTAA Gene GeneID:530233|MGC148938:NM_001102128:286_cdna Constitutive 0 NULL GeneID:530233 18 GENE MGC148938 NULL hypothetical LOC530233 EMBV3_29050 ATGTCAAAGCCAAAATCCAAGACAAGGAGGAGTCCACCCTGCACTTGGTGCTTCGTCTGC Variant GeneID:615199|UBA52:NM_001076363:62_cdna 139^225 1 EMBV3_30276 GeneID:615199 7 GENE UBA52 MGC127041 RPS27A UBB UBC ubiquitin A-52 residue ribosomal protein fusion product 1 EMBV3_01224 CTCGCTATTTCTTGCTCTGACACTCACACAAACCAGCTTCTGCTCTTCTACCTTGTGGGC Gene GeneID:515598|LOC515598:XM_002693647:223_cdna Constitutive 0 NULL GeneID:515598 15 GENE LOC515598 NULL similar to Olfactory receptor 5T2 EMBV3_11308 AGATACTCTGCCATCATCAGCCATCGCCTCTGCTTACGCATAACATTAACCTCGTGGGTG Gene GeneID:529516|LOC529516:XM_002691568:60_cdna Constitutive 0 NULL GeneID:529516 11 GENE LOC529516 NULL similar to olfactory receptor Olr421 EMBV3_21640 GGACTTGTGTATATACACATGCACATATTGCCCACCAGCATGTTAATTGTCAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_11540 CTGAGGAGGAGCTGAACTTTCTCAAAAGATACAAAGGCCCTTCTGACCATTGGATTGGCC Gene GeneID:784451|LOC784451:XM_002687811:93_cdna Constitutive 0 NULL GeneID:784451 5 GENE LOC784451 NULL similar to C-type lectin domain family 2, member h EMBV3_29355 ACAATTATGATTTCCCTCCTCTACCATCAGGCAAATACCACATTCAGTTTCTAATTCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00952 GAATAGCCTTTCCCAACTCAAAGCAACCGAGAGCTAAGCAAACGGGAAGAGGGACTGTGC Gene GeneID:100140740|IGSF6:XM_002697992:74_cdna Constitutive 0 NULL GeneID:100140740 25 GENE IGSF6 NULL immunoglobulin superfamily, member 6 EMBV3_12897 GCCGGGCTCTCTTACTCACATCTCAGGTATGGGGTCTGTTTTGCTCTTCCCCAAGTTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28533 CTACTGCAGAGGCAACCTAATACACCATACCTACTGTGACCAGCTATCTGTGGCCAAGCT Gene GeneID:517799|LOC517799:XM_002693248:522_cdna Constitutive 0 NULL GeneID:517799 15 GENE LOC517799 NULL similar to Olfactory receptor 658 EMBV3_04963 GGTCTTAGGGAAGGCATCACTCGTGGAGGAAAAGGCCTAGTTTCTGGTTTTGTAAGTGGC Gene GeneID:519494|VPS13A:XM_002689657:56_cdna Constitutive 0 NULL GeneID:519494 8 GENE VPS13A NULL vacuolar protein sorting 13 homolog A (S. cerevisiae) EMBV3_25051 GAACAGCCAGTGTGACATAGGCCATGGCATAGACATGGCTACTGTACTTTGGGAGAAGCT Variant GeneID:540328|FBXO25:NM_001076211:69_cdna 249^402 3 EMBV3_03018 GeneID:540328 1 GENE FBXO25 MGC137945 F-box protein 25 EMBV3_18382 GACATTCATGGGGGGCTATTCCCAACCACCTTTCTCTGTAAGAAAATCAACCCGACCACC Gene GeneID:533049|BOLA:XM_002697328:251_cdna Constitutive 0 NULL GeneID:533049 23 GENE BOLA NULL non-classical MHC class I antigen EMBV3_10579 CCAAGCTACCTTTATCTCTTGCCTAGTTTTCTTGTGTTCACTGCTGCACCCCTCCCCACT Gene BVT0102_026262 - 1 EMBV3_32688 GK000015.2:45799992-45836410 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059285 TCONS_00059286 1 XLOC_036301 NonCoding TCONS_00059286 XLOC_036301 NonCoding NonCoding - 15:45805716-45816867 - TSS44486 2311 1 TCONS_00059286_1 119 0.602769363911727 2 0.792914798206278 0.000678326146792165 0 8.74626671697676e-05 0 9.10766662066991e-35 5.54439989925408e-06 1.06990441566388e-05 0.000260063170013285 4.32610010995686e-05 3.82845218910556e-05 3.3820252179538e-06 0 2.6259015314258e-06 0.000112879134309047 6.56500728992932e-05 2.59750495923034e-05 7.40096862925864e-05 8.5788640848345e-05 7.66627654939331e-05 0.000191057597095216 0.00060331669509287 5.59867737256045e-05 4.45114818285209e-05 0.000234230744211854 0.000741890671553432 6.66878106001092e-05 0.000114428430501927 0 0 0.000484928650466352 XR_230111.1 LOC101902732 PREDICTED: Bos taurus uncharacterized LOC101902732 (LOC101902732), 1e-36 159 71.52 0.131977498918217 0 noncoding 1 1 1 1 0.0779382660600172 0.610809401894456 -0.0842446100951683 0.591492845981209 ATGGCAGCAAGACTGGAGGGACAGCTGATTCATCTTCCAGGGTGGGAATTCAGAAGTCACCAGATAATGACAACTGAAAAAAGAATAAAGTAGCAGAACAAGCATTTTTTCTAGTATCATGGATAAAAATACTAAGAGTTTGAAGTGGCTCCATCTCAGGAAGAGCAATAGGGGTGTGCAGATGGGGAGATGGCCACTTTAACAAATCGTATACAATTATTTGAGCCTTCACATTGCGCATATATATAGTAGTGATAAAAAAACCAATCAGAAGGACTACAAGAGAGAACGTGTGTGGTGTGCCTGGCACAGAGCCGAGATTTGATTGATTACTGGGCACTCATTTCTCCTTGTAGCTGCTGTATATCAGGCAAGTGTCTGTAGCTGCCTGCTGAGAGTTTATCCAACATTCTCTCAGTTAATCCCCACGTGCCACTTAGGAATTATTCTCCCCCTTTACAGACAGATAAAGCAAAGTGTCTGAGGATTCGCCCCATTTTTCCTCCCTTCCTTCCACTTTTCCTTTGAGGCAGGAACCCACCTAGTAGAGGGCTTTGAGCACAGGAGGGTCTAACTTACCTTTTAAAAGGATTATTTTGGCTGCTGCTTGAACTGGGGGTAGCGGGGTGAAGAAGTGGGGAGGGGTGCAGCAGTGAACACAAGAAAACTAGGCAAGAGATAAAGGTAGCTTGGACCAGAATGCTTGTGGTAGATGTTCTGATCCTTAATATATGTTGAGGACAAAGCTTGTAAGCTCTACTGATAGGCTGGGTGTGGGCAGGAGAAAGTGAAACCCCAGGCTTTTGCCCTGAGCTTCTGGGAGAGTGGGGAGAACTGTGGGAGCAACAATGCTGGAGAGGGTGGGGTGGGAAGGGTGTGAAATTAGGAGGTTGGTTTTGGAAATATTCAGTTTAAGATGCCCAGGGACACCTAGAGAGAGATGCTGAGTACAGTAGCCATTTGGAAATTCAAGATATTTGGAGAAATCTAGACTGGAGATATTCTGGGAACCGTTTGCATAAAGGCAGTATTTGAACAACCACAGGAAGTAACTTAAAAAATAGTGTAAGACAAAAAAAAAAAAAGAGGCTCCAGGACTCTTTGAAACACTCCAAATGTGCTGTCAGGGAGGAGAATCAATGAAAGGGACGGAGGAACAGCCAGGAGAACTGAGACAGGGGTGCAGCATAAACCATGTGAAAAGTTAGCAGCCGAGGACAAAACCAGGGGTGCCACGTGCTGCTGAGTCAGCCCAGAGGCCATCTTCTCTCCAGCGACTCGCTGGGGGTGACCTCACCTGCTCCACAACCTCACCTGCCCCGGCCTTACCACACCCTGGATGGCAAGAGCCTGACTGACTGCCCTGCCTCCAGACAGCCTCTCCACTCGCCCTGCACTGCAGGCTCACTGACTCAACGCTCCTCAAACCTTCGTGTTAGAAGCACCTGGAGAGTTAATGGCGCAAGAGGCTCAGGTGATCCTGAGACTGACCAAAGTTGATGGAATGCAAACACAGCTCCCAACCGGGCACTCAACTGCTTGTGGAGAGTTTCAGGGTCCCACCACCAGCCAGGGTAGAATTATGATTCTTACCAAATTGATTCAACCTACTCAGCTGCAGCTCTACGTGTCCATCATACACCATGGCAAACCTCAGCCCCATCCCAACCAATGTCTTACCATTAGCAGGCAGATTCTAAGCATTAACTGTCTGAATCCAGGAGCTTTCCAGCTTTTATGCCCATGCTGGTTAACTTTCCATCTTCTCTTTGAGCCAACTCTTCCAGAAAACCCTGTGTACAGTCAGGTCACTTGAGATGGCTGTTCTCTTGCTCTCTGTACATCCTCTGCCCAACCAGTGCTTGCTTCACCCTTATCTTAAGTACATGACTGACCTTCCTGCGTACTTGCCCCAGGTAATGATAGTGTATCAAAGGGCTGGTGAGGGGCGTGTCCCTCTAGTGGTTTCCCGGTAACTAATGAGCCCACCTGACATCAATTCCCCCTATAATTAGTAATCTCTTTCTCCCGGGAGCAAAGACTGCCACCATGTCCTGCCTGCTGTCTGCTCTACAGGGTAGGGAGTCGCTCCAGGACCTTGCTTCAGACATGGCTGCCTTGCCAGAGGGAAGTGGTCCAGGGAGATCCCACATGCTGCGGAGCAACTAAGCCCGTGTGCCACGGCTACTGAAACCTGTATGCCCTAGAGCCTGCACTCGCAATGAAGAGCCGCTCCCACCCTGCCCCACACAGCAACAAAGACCCAGCACAGCCAAAAATGAACAAATAAACTAACATTAAAAAAAAAAAA TCONS_00061437 r 5' 0 TCONS_00061437 r 5' 0 EMBV3_24578 ACAGATGTGTGTGATTTTGGAGGAACGAACTGATGACAAACCACGATGCCTGTGATTCTG Gene GeneID:615501|SH3RF3:XM_002691276:343_cdna Constitutive 0 NULL GeneID:615501 11 GENE SH3RF3 SH3MD4 SH3 domain containing ring finger 3 EMBV3_00794 GGTTAGAAAATCCAGGCATGTCCATGTGTTTCTTCCAGGTGCAGTGAAGACTGATGAGTC Gene BVV0101_040226 + 0 NULL GK000011.2:44042617-44130353 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027718 1 XLOC_015311 Coding TCONS_00027718 XLOC_015311 Coding Coding ANKRD57 11:44127879-44132262 o TSS19585 4383 1 TCONS_00027718_2 386 0.129819758156514 1 0 0 0 0 3.29970599455956e-06 7.88501081443913e-06 0 1.5860979874807e-11 1.19016316497139e-11 9.39717420273149e-06 1.63548063395645e-06 3.55508656745351e-12 2.44731469123195e-06 6.86212841088469e-05 0.000145020670661091 6.82750887352796e-05 0.00034722787143411 4.54545504539679e-05 0.000287660346440126 1.54549804470948e-11 0 3.98249885351725e-12 3.91589534365897e-05 4.17870149530038e-06 0.000141521962482385 1.20622585877711e-11 1.19096346289029e-11 3.47913950693347e-06 1.79004929532383e-11 2.87975933029576e-05 4.93819480372742e-05 XM_005212736.1 ANKRD57 PREDICTED: Bos taurus ankyrin repeat domain 57 (ANKRD57), mRNA. 0.0 7903 100.00 0.999543691535478 NM_023016.3 SOWAHC Homo sapiens sosondowah ankyrin repeat domain family member C (SOWAHC), mRNA. 0.0 901 76.82 0.266484143280858 TCONS_00027718_2 sp|Q8C0J6|SWAHC_MOUSE SWAHC_MOUSE Ankyrin repeat domain-containing protein SOWAHC; 4e-144 424 69.42 0.77979274611399 5 coding 0 0 0 0 -0.298498931521486 0.161937358437403 -0.161261782896491 0.0399841985519881 ATGGAGGGACCCGCCGAGTACAGGGCTCGGGATCGGCAGGCCGAGATGGAGCAGCCGGTTGGGGGCGCCCTGGGCGGATCGCCCGAACAGCGCGCCAGCGTCCGCCCCCGCCCCAAGGAGCCAGAGGACGCGGCGGGAGACTTCGCGGACCCCTTCGACCCGGTGGAAGGCACCCCGAGCGCACCGCTCGGAAGGCGACCCCGCGGTGGCCTAGTGGGGGAAGGTGCGCGGCCCGAACCGCTAGGCGATGCGCCCCCCACGCCGCGGCCGGGCCGCACTGCGCCCCGGGACCCGGCTGCAGGCGGCTCCCCTCAGCTGCGGCGCGGCCCCGGGGGCGCGGACGGCGCGGCGGCCGAGGAGGAGGGCGCGGGCTCTCTGACGCTGGATCCGCTGGAGCACGCGTGGATGCTGTCGGCCGCCGACGGCCGCTGGGACAGCCTGGAGGGGCTGCTGGCCTGTGAGCCTGGACTGCTGGCCAAGCGCGACTTCATCACCGGCTTTACCTGCCTGCATTGGGCAGCCAAGCACGGCCAGCAGGAGCTGCTGGCCCTGCTGGTACGCTTCGCGGGCCAGCACCGGCTGCCGGTGAACATCAACGCGCGCACGAGCGGCGGCTACACTGCGCTGCATCTGGCGGCCATGCATGGGCACGTGGAGGTGGTGAAGCTGCTGGTGGGGGCCTACGACGCGGATGTGGACGTTCGCGATTACAGCGGCAGGAAGGCCTCGCAGTACCTGAGCCCGAGCACCGCCGAGGAGATCCGGACGCTGGTGGGCGCCCTGGACGAGGACGAAGGCGAGAGCGCGGCGGGCAGCGGGGGAGGGCGCTGGAGGCTCTCGAGGGTGCTACCCTCGCACCTCATCTCCGGCAGGCTCTCCCACGCTCTGGAGGACGGCGGGGACCATCACCACCACCTGGCCGAGGGATTGACTGCGGGCAAAGCAAAGGAGCCGAATCGCAAAGCCTCGGGCAGCTCTAGTGGGCGGATGAAACCCAGACTCAACAAAATCCGCTTCCGAACCCAGATCATCCACACCACACCCTCTTTCAGAGACCCAGAGCAGCCTCTGGAGGAGGGGGAGGACGAGGAAGAGGACCGATCTCTTAAAGGCCACTCGTCCTCTTTCAAATTGAGACCCAAGTCCAATGTATTTGGGTAAAAATCATTTCTTTTAGAAAGTTCTGAGACTTGTTTGCCGTCAGGAATAGGATACTAGATGTAGACAAGAAAGTGAGACCAGAAAAGACGCTGAAGGCTGCATTCTTAATCCGAGGGGTCTCCCCAGCAATGTGGCTGCCGTGGCTTTCCAAGTGATTCCTCCAACCTTGACCTCGGTCCCCTGCCCCCTGCAGCCTCTCTGCCCTGGAGTTGCTGTTTTGGAGAACTAGTAATGTATCTAAATCCGGTGCAGAGTTGATGATTGCAGGTTCCTTTAATTTAAACATTGCCGGATGCCATGCAAAGTAAGGAATATTGCACTTTGCAGTATCTTTTTAAAAGTGGTTACTCTTCCAAGAGCTTCCCTTTGTGGCTCAGCTGGTCAAGATCCAACTGCAATTCAGGAGACCAGGGTTCGATCCTTGGGTTGGGCAGATCCCCCTGGAGAAGGGAAAGGGTACCCACTCCAGTATTATGGCCTGGAGAATTCTGTGGACCGTATAGTCCATGGGGTCCCGAAGAGTCGGACACGTATGAGCGACTCTCACTTTCACTTTGCACTCTTTCAAGAGCAACAAGACATGCAAGTAGTAATGAACTGGTAGTATTTGTAAGTGTAAACAAAACTACACACCGCCGTCTGTTTTTACTAATTGTATTTGCTTTAAGATACTACTGATGGCCAGGTCAGAGTTTACATGCACAAATACTAATTAGGGAATAATATGAATACAATTGGGAGTTCTCTTGGTACCCTACTTGTAAATTGTGTTCAACTCTTCAAAAGCTGTTTCAGCTTTAACTACTGAACTGAAGATATGGGCAACATTCACTTTTGAGTTAATCTGTTGGGTGGTTTCCTCTTAACTATCTCTAATACCCCTGCACTCAGTATTAAGGTACATTATTAATAACTACAGGGCTTCCCTGATAGCTCAGTTGGTAAAGAATCCACCTGCAATGAAGAGACCCCAGTTCGCTTCCTGGGTGGGGAAGATCCACTGGAGAAGGGATAGGTTACCCCCTCCAGTATTCTTGGGCTTCCCTTGTGGCACAACTATTTAAGAATCCACCTGCAATGCCAGAGACCTGGGTTTGATCCCTGGGTTGGAAAGATCCCCTGGAGAAGGGAAAGGCTACCCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTATATAATCCATGGGGTCTCAAAGAGTCGGACTCGATTGAGCGACTTTCACTTTAATGACTACACAAGTTTTTATTTAAGAAAACACTTGTAACAACCTATGGTACTTCTAGGAAAATAATTGCCTCTGGTTCTTATTCTCACAAACTTGTTTTGCTCTTGTAAAAGTCTGAATTTTAGGAGTTTTTGTTCCAGGGCTTATACAACTGTTGGTTCTACTTGATGTGATCCTCTTTGTGCTTAGAGTTGAATTGCCTTCGGAAGCTGTTTCTGGTTTAGGTGATGAGCAAAAATTGATGTAAATGTTAGCTGATGCTTCTATGAAGTAATTATTAAATCAACTTAATGATTCTCACATAAGGTACACTTTTTATTTTCTAATGAAATACATTCATAATCTCAATACTTTGTAGCAGTGTTTTGCAAATGTTTAAAATACTAAATCCTTTTAGTTTTCATGTTTCTTTGAATCTATTAGAGACATAGAGTGAAGGTATTGGGAAGCTGGCTAGTAAATCTACCCAGTTAAAAATAGCACTTTATAAAAAAGGGAAAGATAATAGATGGGACATTTTCTATATTTAAATGCTGCTGGCTACTGAATCCTTTTGTATATAAGTGAAAAATATCAGTCATTGCAATTAAAGACTCAAGTGTACTTAATTACGTTTCATTCAAATATACTAGGGTGAATGTCTTTACAGTTATTGTTAAATTTAATTCAGAAACATATTAAATTCACTTGTAACAGGATTCAAAGCAATTTGAGAGAGATCTAATTCCAAAAACTTCTTCTCCCTTGGTCTTTTCCTTGTAAGAAGAAAAAGACAGTTCCTGAAACATGCATTTTGCAGCCTACGGAGATGACAGAGTGAGTTCACAGCTTGCAGAGTGAATGAACCAATACACGAATTGCACACAACTGCAGTGTTTAGAGAGTTCTTAAATCTTTAATTTCCCAAATTATAGAAATTTGTAACAAATTGGTCACACCTCCCTAGATAGTAGTTGAATTTGTTTAAAGGCTAATGAAAAGTATTCATATAAAACAAAGTATTGTCCATTCCTGTGCTTTTAGTTTTGTTTTAGGATTACAGAAGTGGGCTATGTACATTTGAGAAGCACTTTTATCCATACATTTAGGTGAAAAACAACCTAATTTTGTATAAATTAAAAATAGGTTCCTATCTAGTACAGGATAAGTTGTAATTTGTCACCAAGTCTTAGGCTTACAGACGTGTGAAGCTGAAGTGAGACATAAAAACACTGCAGAACCACCTGAACAGTTTAACCACCTGAACGTTCTCCTGAACAGTGTTAATCTCTTAAATGTGTATGGTTGGTTTAGTCACTCAGGCATGTCTGACTCTTACAACCCCATGGACTGTTGCCTGCCAGGCTCCTCTGTCCATGCAATTTTCCACGGTTGTTGTTAGTACTTAATTGCATAAAATCTATAATTTGCTAGATCTTTAGAAACTGAATCAATTCCTAATTTGCTTTTCTGATAAAATGTACTTTAAAGTTTCAAAAATCATTCCTAGGGGAACAATTTCTAGCATTCCTTGTCATGAGGTACTTGCGTGCAGTAAGTACAGCATTTTCAGCTACTTAACTCTGTTCCTCTTTTTTTTTTTTAATTTCCAATTATTTTTTTTGGAATTTTCCAGCTTATGAAAAGCAAGTGATTTATGTAGTTTGGTATCTGTGGAGTTATGCCTGCCATTAATGGAAATATGTGTGTCAGTTACTCAGAGGTTGTCGATATAAAACTGGTTAGAAAATCCAGGCATGTCCATGTGTTTCTTCCAGGTGCAGTGAAGACTGGTGAGTCTGTCACAGCTCCCTTCACTGTTATGGTATATGAAGTGCAGCTAGCTTATACAACCTGAACATATGGTGCTATTTTATTCATGTCTGAAATCTTGGCATCCAGAAGGCCTTGTCTCTTATTTTTCAAATAAGTGAAACTTTGGGAGTTCAGAAAGTAAAATCTATGAAGTTTGTTTTGTCAGAATAAAAGATTCACATTAGATTTTCCCTCTGA TCONS_00027719 s 5' 0 TCONS_00027719 s 5' 0 EMBV3_03881 GTCAGACCGGTGTTGTGGCCAGAGTTCACGCAGGTCAGGATAGTCAGGTGTCAGAGTGAA Gene GeneID:510683|PINK1:NM_001099701:126_cdna Constitutive 2 NULL GeneID:510683 2 GENE PINK1 NULL PTEN induced putative kinase 1 EMBV3_09701 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32186 TGCAATCCTGCCCATCCACCACCTGCCAACCCTCCATACCCACCACCTGGCCCTGGCATG Variant GeneID:506705|PRR13:NM_001038047:24_cdna 210^344 1 EMBV3_07251 GeneID:506705 5 GENE PRR13 MGC133876 proline rich 13 EMBV3_43255 CCCTAGAGCCTAGAGAAGAAATACAGCCCTGCCAGCACCTTTGTTTTAGGACATCTGACC Gene GeneID:529881|C20H5ORF22:NM_001075927:39_cdna Constitutive 0 NULL GeneID:529881 20 GENE C20H5ORF22 NULL chromosome 5 open reading frame 22 ortholog EMBV3_37769 GCCGTTTACTCTGTCTGGGTCTTCACACCAACCACATCTCTAGTCAATCCTCATAAGGCA Gene GeneID:535311|HOMER1:NM_001076052:218_cdna UTR3_Alt 2 NULL GeneID:535311 10 GENE HOMER1 NULL homer homolog 1 (Drosophila) EMBV3_35335 GAGGAGAGGTGGTTATTCGGAAACATATGAAGAGGTGGTGATTAGGGTCCTCAGTCCTGG Gene BVT0102_089875 + 0 NULL GK000005.2:82482570-82486884 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195720 TCONS_00195718 TCONS_00195719 1 XLOC_118127 Coding TCONS_00195719 XLOC_118127 Coding Coding MRPS35 5:82483851-82530531 j TSS145792 4043 1 TCONS_00195719_2 265 0.228790502102399 6 0.913515713704235 0.000905646377819437 9.55915946253095e-05 0.000686356968264654 0.000719201909619907 1.94491804050647e-05 0.000112892091637549 0.00116018399791357 4.2875681372363e-08 0.00147049425828843 1.18532144000072e-08 6.4503123257554e-10 5.56750058418896e-05 0.000169400797475533 0.0002075721336138 0.000140511452836686 0.000964552539390711 0.000194655127363259 0.00418555481435916 0.000531246063508804 0.000892247586648096 3.87929185118461e-05 8.85825797359958e-08 0.000680993096357463 0.000620910971652799 0.000482360497269801 3.94895959370325e-05 0.000214009739425131 4.89854454694083e-08 5.68116924330256e-05 6.86419708695932e-08 XM_005206915.1 MRPS35 PREDICTED: Bos taurus mitochondrial ribosomal protein S35 (MRPS35), 0.0 2082 100.00 0.285184269107099 NM_021821.3 MRPS35 Homo sapiens mitochondrial ribosomal protein S35 (MRPS35), 0.0 713 73.76 0.2883997031907 TCONS_00195719_2 sp|Q2YDF6|RT35_BOVIN RT35_BOVIN 28S ribosomal protein S35, mitochondrial; 4e-170 478 77.54 0.99622641509434 0 coding 1 1 1 1 -0.303359435178018 0.116596134637231 0.0124832948280743 0.802736221178923 ACGTGCTTCCTGTTTCTCCCTCCCAGGGGCGGGGCCAGGCTCGCCAGCCTGCGCAGTAGGGCCTCAAGCCCGCCCCTTGACCCGGAGCCGCGCTTGTCCCCTCCCGCTTGCCGTCTTGGCCGACATGGCGGCCCCCTCGCTCCCTGCGTGGTTGGCGCTGCAGACGCGAGCCAGGACCCTTCGTGCTTTTTCTACCGCTGTGTCTCCTGTCACTGGCGCTCAGAGACTAAGCCCGCCCACAACAGAAAGAACCTCCAAACATGAAAGGGCGCCGAGAAGAAAGGCACTACCTCCCAGGACAGAGAAAATGTCTGTTGACCAGGACTGGCCTAGTGTTTACCCTGTTGCAGCTCCATTTAAACCCTCCGCAGTACCTCTTCCTGTTCGAATGGGTTATCCAGTAAAAAGGGGAGTGCCCATGGCTAAGGAGGGAAATCTGGAACTTCTAAAGATTCCCAATTTTCTGCATTTGACTCCTGTAGCAATTAAAAAGCACTGTGAGGCTCTTAAAGATTTTTGCACTGAGTGGCCAGCTGCATTAGACAGTGATGAGAAATGTGAGAAGCATTTTCCAATTGAAATTGACACAGCTGATTATATTTCATCAGGACCATCTATTCGAAACCCCAAAGCACGAGTAGTGACCTTACGGAAAACTGAAGAGTGGGAGAAAAAGAAGACTGAAGCAGATATGGAAGAGTATGTATGGAAAGATAGTGCCTCAGAAAAAAACATTCTGGAAACCCTTTTCCAAATTAAAGCTGCTGAGAAAAATACAGAATTAAGTAAAGAAGAGCTCCTTAGTACTAAAGAAGTTGAAGATTACAAAAATTCTGTTGTTAGTCTTAAGAATGAGGGGGACAATGAGAATACCATTTCTCAGTACAAAGAATCAGTGAAGAGACTATTACATTTGATGTGAATTATACAGAAAAATTTCCTTGATTTACTAATTTTATGATACATATGTAATCATTAATTTGATATAAAATTGAAAATGTTTTTTTTTTTAAAAAGCCATTGTTTTACTACATTAGAGTTAAAATTATTCCTTTCATTCTAAGATACAAGGGCAATGATTATTCAAAGGTTTTCTTATATACTAGGGCAGTCAGACTAATTTGATTCTGATTTCTTCTGGTCCTAAAGTGTTTGAATTTTATTTCTACCATAACCCTTTAGTGTGTATATGTATATATATACACACACACACATACACAATATATTGTTCTTTTGTCACCTGCTCTATTTCTTTCTCTACAAATCAGTACTTACTGGTTGCTTTTGAATAATGATTTTGGGTATTTAGGAAGTTCAGCTCAGAACCCAGTCCCCTGACTGCAGTTTAGTGTTTTGTCTACATAACTACTACCTGCCGAGTGAGGTTTTTGCAGATGCTGATTCTGATTAGAAACAGGTTCTTGGCAGTATTTTCTAACCTAAGAAGTTTGTTCCATCTCTCTGTTCTGGGATCACTTTATGTTGATTCAGTTCTGTTTAGCATCCTGTTTCCATTTTCTTTGGCTCATTTCTCCAAGCCCAAACTTGCAGAAAAGTGGAAGTGGAGGTTGACCGATATTCACCTCTCTGGAAGCCCCAGCTAGAACTTCTACAGCTCAGGAAAGAGATAAGATATAAAGACCTTTAATTGGAATAAATGACATTGATCACTGCCCTAAGAAACATTTCATTCCATTTAGCTGTCAATTGAATACTTTTAAATATATCTGTGAGTCATTTCTTACCACTTTTAAAGTTGTCAATGAGTAATTTAAAATTGAAATAAAGGAATTACGGAGGCTGTTATTTGCCTAAAATTTAAATTGCTTAACAGAATTTGAGAATATAACATGCTAAAAGGAATTTCAGAACAGTTTCTCAAAAGATGTAGATAAATTGAAGGTATGATTTGGTATTAGCAAGACCAAGAGTCCATAGGTTATGAAGGATAACAGTAGAGCTTCCAGTTCCATCCTCCATTGGATGGAGATAGTGAATAAAAAAGTAGATACAACTGAACTTCTCCTTCTGATTTAAAGCATATGTAAATGTATTGAAATGTTACATTTCTTAGAGACTCAAGGAGTTAAGGAAAACTCAGGTGCTGAAACAGGATTGGAGAAGGAAACATGAGAACAGTAGAAGCTGAGGAGAGGTGGTTATTCGGAAACATATGAAGAGGTGGTGATTAGGGTCCTCAGTCCTGGAGTAATAGTACAGTGCAGATCAAAGCAGAGTAATGATGTGTAATAAAGAATTTGACTTTGCCCAAAGAGAGTCTAGCCTCTGCTATCACCTTCTGGGAGGTAATCTGTTATACCTCATGAAAGTGTCTTTGTTTAGGGCAGGAATTGGTCACAATGGATTTTAGGGTGGGGCTAGCTACACCTGATAGTCTTAAGCATGCTGGAAAAACCAACCATGTGTTTTAGGGTTGGGGGGGGGCGCTTTGAGTCTATCAGTAAATCAGTCCACCTACCAGCTGAGATCAACTGCTCAGGTAATTGATCAGTCAGGCATATCTGTGTAACAGAGCTTCGACACAAATGTAGAACACTGAGGCTCCGGTAAGCTTCACTGGACATATTGTCCACATATGGTCCACGTATGTCCACATATGAAGCATACTCTGGACATATTGTCACACACTGGTGCTGGGAGAACCATGCATCCTGCTTCCACAGGGAGAAGACAGTGTCTTACAAAGTTGTGAGTGTGAAACCCCCCTGAAATTCATCCTAGGTACTTCTTACCTTGGCTGATTTTAATCCGTATCCTTTCCCTATAATAAACTGTGGCTTCCCTGGTGGCTCAGATGGCAAAGAATGCCTGTAATGCGGGGGATCTGGGTTTGATCCCTGGGTTGGAAAGATCCTCTGGAGAAGGAAATGGCAACCCATTCCAGCATTCTTGCCTGGAGAATCCCATGCACAGAGGAAGCTGGCAGGTTACAGTCCATGGGGTTGCAAAGAGACATGACTGAGCACCTAACACTTTTGCACTTTCATAATAAACTGTAAGTATAACAGCTTTCATTGAGTTGTGTAAATTCCTCTAGTGAAGTACGGACCCTGAGAGTGGTTTTGGGACTTGCCATCCCCCAGACTTAGAGTTGGTGTCACAAGTAAGGGAGATCTTGTAGAAGACTGTGCCCTTAACCTTTGCAGTTTGACTAACTGAGCAACTGACTTGAAGAGTCTTAGGCCATGGCATTGACACCTAATGGCAGTATCTTAGGGCTGTAAGATTAACACTACAAAACTGCTGTCATTGTTTTGTTAGCAATAATTAAACAGCACTACTTGTCATTATTTAGATTCTTGCTCTTTAAGCTATTAATTGATCTAATATCACAGTGAACATAATGAATATCCTTTTAATGAGGTTTCTGAGGGACACTTTTTGCTATATTGATAACGTGATCACTTCTGACTTCAAACGTAAATTCCATGGCTCAGAAGTTGCTTATGCACATAGGCAACTAAGAAATGGAACAAACCTGTTTTCTTAATTGTAGGGAGCTTTAGTTTTTTCTTTGCATATTTTCTTTCCAAATTGCTAAATATATCACACAATATTGGACTTACTATGGACTTTTCCCCAAAAGTTTTTGGCCAGTTTCAGTGTCAGAAAGATTTTGATAATCATGGTTATTTCTTAAATGTGTGTTAACAACCTTAGCCTTTGTTGTTGACTAAGCCCTGAAATCTTTGTTTCTTGAAAGTTTTAAATTCTACTCAGAAGTTCTCTTCAGTCTCTCTGATTTCCAGTAAGGACATGATTTCAGGTCTATTTGTTTTTGCTTCTCGGTCAAACTTTTGGGTCACCTTTACAGTTTAAGTTTACTCTGTTTATCTGGTCAAAGATAGAGACTGAAGAAGAGGGGTAAGAATTTGTTTTCTTACAAAGCAAGTATGTTTTCCCCAAATTGTGATCATTTTTATAAAAACTGCAATTTTAGGGAACAAATAAAATTCTGACGGAATCTCAAGGAAGACAAAAAATTTTTTTAGTAACCCTAGTTTGTTGGGAAACCTTCAGAC EMBV3_25718 CTGTGCACATGTTGATTTCTTAATGTAAATGCTTTGTTTAAGATAGTGTTCTCTGTTGAG Gene GeneID:616665|FNBP1L:XM_002686227:227_cdna Constitutive 2 NULL GeneID:616665 3 GENE FNBP1L NULL formin binding protein 1-like EMBV3_00120 GAGTTAGATGGAACACGATGTAATACCTGCTGCTTTGTAATAATGTGCAGTCTGTATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27829 GCCTGTGGGTTTGGACAAATGTCTAACAACATGTATCCACCATTATAGTGCCATAAAGAG Gene BVV0102_157051 + 0 NULL GK000003.2:56180430-56832904 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177776 1 XLOC_107549 NonCoding TCONS_00177776 XLOC_107549 NonCoding NonCoding - 3:56824156-56824853 - TSS132535 697 1 TCONS_00177776_1 56 0.968436154949785 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000530505465236844 0 0 0 0 0 0 0.000263244400533069 0 0 0 0 0 0 0 XR_227925.1 LOC101907123 PREDICTED: Bos taurus uncharacterized LOC101907123 (LOC101907123), 1e-61 241 70.31 0.832137733142037 XM_005264120.1 CCDC104 PREDICTED: Homo sapiens coiled-coil domain containing 104 (CCDC104), transcript variant X2, mRNA. 5e-110 401 76.23 0.829268292682927 0 noncoding 0 0 0 0 -0.10024988953571 0.510957673105356 0.0285448565898969 0.619028154749886 CAACGAAGATGTCCTTCAGTAGGTGAATGGATAAATAAACTGTAATACATCCAGACAATGGGATATTATTCAGTGTTAAACTGAAATGAGCTATTGGGTCATGAAAAGACATGGAGGAACCTTAAATGCATGTTACTAAGTGAAAGAAGCCAATCTGAAAAGATTATATACTATATGATTCCAATTATATGACATTCTGGAAAAGGCAAAACTACAGACGGTAAAAACATCAGTCATTGTCAGAGTGTGTGGGGTGGGGTAAGGATGAATAGGCAGAGCACAGAGGATTTAAATTGTGGTGAAAATACTCTTTATGGCACTATAATGGTGGATACATGTTGTTAGACATTTGTCCAAACCCACAGGCTTTACAACACCCAGAGCGAACCCTAATGTAAACTGTGGACTCTGGGTGGTTGTGACATGTCAACAAGTGTAGGTTCATCAGTTGTGACAAATGTACCACTTTGGTGGGGGATGTTGATAATGGGAGAGCCTGTGATTGTGTGGGGGCAGAGGGAAGATGAGAAATCTCTGTACCTTCTTCTCAATTTTTCTGTGAACCTAAAACTGCTCAAAAATATTTTTTTTTAATGAAAAAAATTACGTTTATATTCTAAACCAAAAACAAATTATTTGGGTGTTGCCCATTATTTTTTAATTAATCTACATCACAAGGCCCCTCCACTAGAGAAGG TCONS_00173492 TCONS_00173493 TCONS_00173494 TCONS_00173495 TCONS_00173496 TCONS_00173497 TCONS_00173498 . 3' 8043 TCONS_00173492 TCONS_00173493 TCONS_00173494 TCONS_00173495 TCONS_00173496 TCONS_00173497 TCONS_00173498 . 3' 8739 EMBV3_04348 AGCGTTCCTTCGCCGGGAAGCACGAGGGTCCCAAAAGCCTGCTTTTGCCTATCAGAAAGA Gene GeneID:520267|LOC520267:XM_002695172:808_cdna Constitutive 0 NULL GeneID:520267 18 GENE LOC520267 NULL similar to Myb protein P42POP EMBV3_29163 CCCAGGGACAGCATATCAGAGCTTTGAACAGGACACTTTTGTGGAACTCTACGGGAACAA Variant GeneID:282152|BCL2L1:NM_001077486:745_cdna 692^880 2 EMBV3_37257 GeneID:282152 13 GENE BCL2L1 BCLX Bcl-xL BCL2-like 1 EMBV3_13645 TTCCTTTATGTTGTGGACACTCGGCCCAAGTGTGTGAACTTAAATCTCCCTCCATGAGTG Variant GeneID:513986|MTMR7:NM_001075641:52_cdna 766^898 1 EMBV3_16242 GeneID:513986 27 GENE MTMR7 MGC139687 myotubularin related protein 7 EMBV3_22021 ATCTCTCCTCCTAGTTCGAGGGGGCTGACAAGTAAGGATCCACAAGAAACTTCCACGTCC Gene BVV0102_017551 - 0 NULL GK000005.2:25971565-26015048 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43170 CCAGCCAAACCAGCTCTGAGATGAGCTGGGTAGACCTTAACATCCCAGATACCCTAGAAG Gene GeneID:506790|TXNIP:NM_001101875:59_cdna UTR3_Alt 3 NULL GeneID:506790 3 GENE TXNIP MGC154995 thioredoxin interacting protein EMBV3_23340 CCATTAGGTTTCCTTTTATTCTGTAACTGCAGCCATGGTCAGCTCTAGCCAGGGAGCTGG Gene GeneID:506544|PFKM:NM_001075268:66_cdna Constitutive 0 NULL GeneID:506544 5 GENE PFKM MGC139772 phosphofructokinase, muscle EMBV3_33488 CTCCATGAGAAAAAGGAGCATTCCACTGCACATGGAGGATGGAAAGGAAGATAGTAAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14017 TGGGCCCTTAAAGCCTTTTTTTAGGCTTTGGCCCAAGTGGCGGTACCATTCTGCATTCCT Gene GeneID:100336846|LOC100336846:XM_002683628:2_cdna Constitutive 0 NULL GeneID:100336846 5 GENE LOC100336846 NULL enterophilin-2L-like EMBV3_19769 TCGGAGATGCCCTTGCTGCCTGTGCTGCTTGCTGTTGGAGGTCTTTTGCTGCTTTCAAAT Gene GeneID:519706|NPHS1:XM_002694940:49_cdna Constitutive 0 NULL GeneID:519706 18 GENE NPHS1 NULL nephrosis 1, congenital, Finnish type (nephrin) EMBV3_23537 GGCTGCTGCTATGCTGTTGTCTGTAATTAACTCTCATCTGGGCCATCACTCACCTCCTTC Gene GeneID:535243|CYP2C18:NM_001076051:189_cdna Constitutive 0 NULL GeneID:535243 26 GENE CYP2C18 MGC139147 cytochrome P450, family 2, subfamily C, polypeptide 18 EMBV3_28275 GAAAAGAGGAGTCAGAACTGAAGGAGAGCAGTCAGCCATGGATTTTCACCAATTCTTCAT Gene BVT0102_398880 + 0 NULL GK000025.2:27895364-27911079 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20596 TCGCGCCGAGGAGGAGCTGGCGCTGCCCGGTGGGTGCCATTCATGGAAGAAGACTGCAGG Variant GeneID:511716|EPHX2:NM_001075534:11_cdna 181^265 1 EMBV3_09536 GeneID:511716 8 GENE EPHX2 MGC139743 epoxide hydrolase 2, cytoplasmic EMBV3_11462 CGGAAGACAGTTCAGTCCCATCTGAAAAAGGTCGCAAGAGTGGAGCCTGGGACTCCAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29281 CCTTACGGATTCAGACTTGACCCATCTGTCCCAATGCTGAGCGCCTCTCAGTTCTGCTGG Variant GeneID:517884|LOC517884:XM_002694084:327_cdna 939^1000 1 EMBV3_24611 GeneID:517884 16 GENE LOC517884 NULL similar to preferentially expressed antigen in melanoma EMBV3_02256 CAATCTGTGGACAGTGCCTGCGTTGATTTCCAAGGTGTCCTTCCTCCGATGGTGTTTTGA Gene GeneID:508829|ABCG8:NM_001024663:74_cdna Constitutive 0 NULL GeneID:508829 11 GENE ABCG8 NULL ATP-binding cassette, sub-family G (WHITE), member 8 EMBV3_08179 AAAGTTAGGGCAGCTCATCACCAGTGTGAAGGTGTGGGAGCTCCTCTCTCATCATGGTTT Gene GeneID:511267|STARD3:XM_002695960:275_cdna Constitutive 1 NULL GeneID:511267 19 GENE STARD3 NULL StAR-related lipid transfer (START) domain containing 3 EMBV3_03042 GGAAGAGGGGCTGTGTCAATCACTTAGTTTAACCCCCTTCTGTAACCTGAAGAAACAGGC Gene GeneID:513555|LOC513555:XR_083747:26_cdna Constitutive 0 NULL GeneID:513555 8 PSEUDO LOC513555 NULL similar to KIAA0368 protein EMBV3_07378 GACCTTGGGACAGTGGAGATCGAATGCAAACTGGAGGTGAAAGTTGTAGCACAATAAGGA Gene GeneID:510763|MYBPC1:NM_001110773:992_cdna UTR3_Alt 2 NULL GeneID:510763 5 GENE MYBPC1 MGC155210 myosin binding protein C, slow type EMBV3_32641 CATTCCACAACTACCACATGGGCATTACAGGTCTTACTGAAGTTAAAACAGATGAGTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25422 CACAAAGCGGTGAGCGAGATCAGTAAACTTCGACCATCCCGAGAAAGAGTCGCCCTCATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33310 TCATTGTCTTGGACGGGGGAGGACTGAAAACCCATGTCGTCGAAGATTTCTCATGGTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24547 TGCAAACGCCAAGAGCAGCTCCCGTGGTGCATAAAAGGTGATCTCAGGATTCAGAGAGGC Gene BVT0101_069992 + 0 NULL GK000001.2:96221708-96388870 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004608 TCONS_00004619 TCONS_00004609 1 XLOC_001071 Coding TCONS_00004619 XLOC_001071 Coding Coding FNDC3B 1:95980216-96232429 j TSS2291 1347 1 TCONS_00004619_3 359 10 0.994698904096554 0.0147097941378409 0.0158912366784372 0.00973250705632378 0.0102097087407172 0.00938533663494027 0.00679371475815634 0.00916282645685 0.00484934355627866 0.00894572263973665 0.00612322127813082 0.000371348247726074 5.39059596950305e-05 0.000970791154316724 0.00511995900089883 0.00029659470936694 4.52600770638196e-102 3.64450031484019e-06 0.00141720808087984 0.00657006685389737 0.0174790131793678 0.00307064214495037 1.11532540927383e-83 0.000373238081522342 1.56621082239624e-206 0.00779987284352247 0.0176078024381142 0.00711809252413533 5.27381650203294e-173 2.55923260891241e-06 0 XM_005201696.1 FNDC3B PREDICTED: Bos taurus fibronectin type III domain containing 3B (FNDC3B), transcript variant X1, mRNA. 0.0 1986 99.91 0.818856718634001 NM_022763.3 FNDC3B Homo sapiens fibronectin type III domain containing 3B (FNDC3B), 0.0 1590 91.85 0.818856718634001 TCONS_00004619_3 sp|Q53EP0|FND3B_HUMAN FND3B_HUMAN Fibronectin type III domain-containing protein 3B; 0.0 664 94.97 0.994428969359331 1 coding 0 0 1 1 -0.307638609470473 0.0789777439954479 0.0430302664202738 0.37992488780991 CACTGAAGGCAGCCACAGGGGTGGGATGAGCCCAGAACAGACTAGAACGTGTCTCGTCTCTGCAAACGCCAAGAGCAGCTCCCGTGGTGCATAAAAGGTGATCTCAGGATTCAGAGAGGCCCTCTGCTTTCCCAGACAGCCCAGGCTAAACCTGGGGAGCTGGCAGCCCTAAATGCTTCCTTTGTTAGAAATTATTGCGCTCCCTACTCCATCTTTAGAAAGAAGCCAGTTGAGGGAAATTCTCCATGAATGTACGTCACAATGATGATGACCGACCAGATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTTGCCATGATGCCTCACTTGGTGAATGGAGATGCGGCTCAGCAGGTTATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACAATAAGAGCGGAGGATGGAACACTGCAGTGCATTCAAGGACCTGCTGAAGTTCCCATGATGTCACCCAATGGATCCATTCCTCCCATCCATGTGCCTCCAGGTTATATTTCACAGGTGATTGAAGACAATACTGGAGTCCGCCGGGTGGTGGTCACACCCCAATCTCCTGAGTGTTACCCTCCAAGCTACCCCTCGGCCATGTCTCCAACCCATCATCTACCCCCCTACCTGACTCACCACCCGCATTTCATCCATAACTCACACACAGCATACTACCCACCTGTTACTGGACCTGGAGATATGCCACCTCAGTTCTTCCCTCAGCATCATCTTCCTCCCACAATATACAGCGAGCAAGAAATTATACCACTCTATGGAATGTCGAGTTACATCACCCGAGAAGACCAGTATAGCAAACCTCCGCACAAAAAGCTGAAAGACCGCCAGATTGACCGCCAGAATCGCCTCAACAGCCCTCCTTCTTCAATCTACAAGAGTAACTGCACCACCGTGTACAATGGCTATGGCAAGGGCCACAGCGGTGGCGGTGGTGGAGGCGGGGGAGGTGGCAGCGGCGGTGGGCCGGGCATTAAGAAAACAGAGCGGCGAGCAAGAAGCAGTCCAAAGTCAAATGATGCAGACTTGCAAGAGTATGAGCTGGAAGTAAAGAGGGTGCAAGACATTCTTTCGGGAATAGAGAAGCCACAGGTTTCTAATATTCAGGCAAGAACAGTTGTGTTGTCCTGGACGCCCCCTGTTGGACTTTCGTGTGGACCCCACAGTGGTCTTTCCTTTCCCTACAGTTATGAGGTGGCTTTGTCAGACAAAGGACGAGATGGAAAATACAAGATAATTTACAGTGGAGAAGAATTAGAATGTAACCTGAAAGATCTTAGGCCAGCAACCGATTATCATGTGAGGGCCTGCTAATTTTAGGAAGAAACCCAG EMBV3_16321 CTCCCTGAAAGTACATGAGAAAACTCACACAGGAGAGAAGCCCTATGAATGCCATCAGTG Gene GeneID:100140270|LOC100140270:XM_002692925:55_cdna Constitutive 0 NULL GeneID:100140270 15 GENE LOC100140270 NULL similar to PR domain containing 9 EMBV3_12075 AGCAGAAACCATCAAGGAACAACACTGACAACCACCTGTTGAGGCCCTGAGTCAAGACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11816 AGCCGGCGGCCCCGAGCGGCCCGGGGACGTGGGCCTGCGAAGCGTCCTTGGCGTGCTCCA Variant GeneID:505159|FDX1L:NM_001080226:303_cdna 226^332 7 EMBV3_29269 GeneID:505159 7 GENE FDX1L MGC152067 ferredoxin 1-like EMBV3_25756 GGCAGCCAACAGTGGGGGCATGTGCTTGCTCATTTTTTCCATGCTGCTCATTTCCTACAT Gene GeneID:100337063|LOC100337063:XM_002693608:115_cdna Constitutive 0 NULL GeneID:100337063 15 GENE LOC100337063 NULL olfactory receptor MOR235-2-like EMBV3_04302 GGTTATAAGCATGAACTTTGAGGTCAGACAGTCCTGAATCTAAGCCATAGCTACCCTTGG Gene BVT0101_047127 - 1 EMBV3_05858 GK000009.2:45855546-45960853 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31370 AGTCCATCTTCCTGCCACGGGTGCCATCTTGACGCCATCAGCTCTTCACCACTGTAATTT Gene BVT0102_009483 + 0 NULL GK000010.2:60275999-60331198 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014271 TCONS_00014275 TCONS_00014266 TCONS_00014269 TCONS_00014272 TCONS_00014274 1 XLOC_008274 Coding TCONS_00014272 XLOC_008274 NonCoding Coding - 10:60295381-60308334 - TSS10356 510 1 TCONS_00014272_1 53 0.209803921568627 3 0.960855466337245 0.00512153884989782 0.0087372692025323 0.00315354552740336 0.0046857152764536 0.00202226275563238 0.00119672486092274 0.00410111579096669 0.00720004257465631 0.0037841778826458 7.04232429950685e-05 4.51842120582732e-06 0.000160537024008553 0.000110127101864781 0.0002823144678254 0.00060387887805001 0 0 1.09033877998757e-54 0.0080588253910793 0.00954529621558312 0.00554520899235738 0 1.05679471859535e-171 1.0483510348922e-260 0.0147957962847595 0.00479317281511646 0.00595877180445878 0 0 3.11785693029759e-150 XR_226917.1 LOC101909881 PREDICTED: Bos taurus uncharacterized LOC101909881 (LOC101909881), 2e-07 60.8 70.62 0.370588235294118 0 noncoding CTGGGCGGGACTTTGCTTGGTTTTCAAAGCCAGGTGTTTTGGGGGCTGGTCTCTAAGGCACAAATCTTAAAAAGTTGGGGTGCCAGATATGGGGTTCAAACCCTTCACTCCTCAGGGAGAAGCTCCAGGTCTGAGTTCCCTCCCAACTCTGGGCTCTGCAGCACCGGAGGTAGGATTCATGGCAGAGTTGCAACCCAGGCCCTCCTACCCGCTTTCGTGTGGGCCTTCCCTGCTTCTGCCTGATGTGTAGGAGTTGTTAGACAGTTTTTAGGGTTTTTTTGGGGGGGAGGGGGGAGAGGAAGTTGTTTCCCGTATAGCAGCAGAGTCAGTGCGTCTCCTGTGAGGCCGGGAGTCCATCTTCCTCCCACGGGTGCCATCTTGACGCCATCAGCTCTTCACCACTGTAATTTCCTTCTGGCTCCTCTCTCTGGTGGGAAGCCAAATCCATGAACCAAGTTTGTGACGTCTACAACCGTATAGCAATCACAAGTCAACAAAGGTGCCTCTGTC TCONS_00014275 s 5' 0 TCONS_00014269 TCONS_00014271 TCONS_00014275 s 3' 11780 EMBV3_38773 GCAGGTAAACGAGAGAGAACAGATGCAGATTAAAGATCACCGGGAACGCATGATTCGAGG Gene BVV0102_075030 + 0 NULL GK000023.2:28717897-28735236 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133020 1 XLOC_080953 Coding TCONS_00133020 XLOC_080953 Coding Coding - 23:28718594-28723920 - TSS99406 1650 1 TCONS_00133020_2 236 0.0915151515151515 2 0.690516431924883 0 3.04498015598092e-05 0 0 0 0 3.53437467073916e-06 0 0 0 0 0 0 0 0 4.8021077414815e-05 0.00029179764721043 0.000167272678827359 0 0 0 0.000152910716087658 0.00085624428715205 0.000274330292319156 0 0 3.55100359976369e-06 0 1.76531199476347e-05 0 XM_005196596.1 LOC101908360 PREDICTED: Bos taurus putative uncharacterized protein ZNRD1-AS1-like (LOC101908360), mRNA. 0.0 1415 100.00 0.474545454545455 NM_029602.1 Znrd1as Mus musculus Znrd1 antisense (Znrd1as), mRNA. 3e-112 410 71.52 0.461212121212121 TCONS_00133020_2 sp|Q2KJ03|ZRAS1_HUMAN ZRAS1_HUMAN Putative uncharacterized protein ZNRD1-AS1; 2e-78 238 65.45 0.805084745762712 0 coding 0 0 0 0 -0.0651109996426999 0.69096932563198 0.00861587337380051 0.885824216881837 GTCGGACACGACTGAGCGACTGAACTGAGCTGGGCCTTTCGAAGGGATTGGCCTGGGCTAAAGTATCAAAAGACCCTAGGATTGCTGCAGGTCAACAGTCTCCACTGGAGAAAAAAATATTGGTAAATAAATCATCCTAACATCATACCATTTGAAAAGACTAGAAGAAGGAAAGTTAGGTTTAAAATCCTACTGCCACCCAAGTGACACTTTGCTGTAATGTGTCCACACTGGCAAATATTTTCCAGCTAAATCTTTACTTGCAAAACAAAGTATTATTTTCAAAACTACCAACACTATTAAAAAAAAAACGAACCAACTAGTTATTGATTTTGGTGGTAAGAACACCAACTTTGAGAGCTTGCAGGCCCACCTAGGAGTGATGGAAGTAAAATCCCTGTTACTCCAAAGTTAATGAAAGACCATGGTCCTTTCTTCCCCCACCCCCACCCCCACCATGGTACTTTCTTGGTGTCAGTAATGAGATAGGCTCCTGTTTAAGTATGTTCAAAGTAAAAAGATGGTCATATTACAAAATTCTGCACCTCACCTTGACAGAATCTAGGTGGCGTACATACATCAGAAGCAAAACAACTGATAATTCAAAAATATCAAGAGGAGTATGAAATGCTCTGTAGGGAGCAAGGGCTTTCCCTTGACTACTGGCTTGCCAAAGCGGAGTCTTATTATAATAAAAGAATAATGGAAATGGTGAAAGAACAAGAGAAAGGCAGTGAAATCAAGAAGAGATTGGAGGGAAAAACAACCCAAAGCATAGAGAGACAAAAACGGTATTATTTGCTCCCTGAGAGAGAAATGAAACACATAGAAAGGCACATACATCGAGGTCGACGGGTCAGAGAGTTTAAGAGTAAAACATTTAAACAATTACCACCACACTCTAGTGAAATAAAATTTCCCAGAATTGTGCTGGGAGGGCATGGCATCCAGAACACACAGAGAAGAAAGCAGGTAAACGAGAGAGAACAGATGCAGATTAAAGATCACCGGGAACGCATGATTCGAGGGAGAGAACTTGTAAAGCAAAAACTCAAGGAAGGAATCTTGAGAAAAGACCAGAGCCAGCCTCCTATGCATGGGAAGTGTGAGAGCATAAGAAGCATAAAGAAAGAGATAAAAGAGTATGAAAGTGTTATTGCATATCCACTTTTCCAGCCATGCAATAGCAGTCGGATTAAAGTGAATGTTCTGATGGAAAAGTCTCAGAATAGAGAAGAAAATAACACAATTATCAAGCCACTTCAAAGAAGATTCTTAACTATGCCACCCTTTTTGAGAAGTCAAATAGGAAAAATAAAAGATTTGGTGCTTTCATGATTAGATCATGTCTCTTAAATGAACCTTTATTTTTTAAACAGGAGAAAATCAAACAAAAGTTTAATAACATACATACATGAGAGAGACCCAGGAAAATTGAGTAACTCCCTCCCACACACACACACTTTTTTTTTAATGCTAGTTCTCTTTCGTAGGGTTCAGTGACGTTTCTCATTTATACAGAAGTGTCAGATAGTTCTGGAGTTTACAACTAGCTTCGCTATTTTTCATTGCCTTGTGTTTGTTCAAGTTGCTTATCCTTTTTGATGTTCATTCCTAATCTGTAAAGTTGGAAAATAATAGTTCCTAGCA TCONS_00134731 r 5' 624 TCONS_00134731 r 5' 624 EMBV3_31536 GACTGGAGGAGGAATTAGCTTGAAGCATGGCCTGAAGACATGTTTGTTTGTGACATCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42177 GGCCTTCCACACACTCAGCGATCCCTGGGCAGTGGAGATGTCTGAGCCTGTCGGGGTTAA Gene GeneID:100296596|LOC100296596:XM_002689810:120_cdna Constitutive 0 NULL GeneID:100296596 8 GENE LOC100296596 NULL hypothetical protein LOC100296596 EMBV3_34901 CGCCTCTGAGAACCTCTCGTCTTCTCAAGGTGACTTATAGATGTGGTCAGACTTAGCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09935 AGCCACATCAGCCCCCTGAGTTGCACCGAGGCCTATGCCATCAATGGGAAGATTTCTCCC Variant GeneID:514636|C25H16ORF13:NM_001038106:165_cdna 542^601 7 EMBV3_08605 GeneID:514636 25 GENE C25H16ORF13 MGC134534 chromosome 16 open reading frame 13 ortholog EMBV3_42054 CCAAGCCTGTCAATGCAAGGGAGGAGAAGAGGTCAGTTTAGAGGGCCTGGTTTTAGGCAA Gene BVV0102_016479 + 0 NULL GK000019.2:37117959-37159423 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093567 TCONS_00093563 TCONS_00093565 TCONS_00093566 TCONS_00093568 TCONS_00093561 TCONS_00093564 TCONS_00093569 1 XLOC_057183 Coding TCONS_00093569 XLOC_057183 Coding Coding - 19:37150880-37156154 - TSS70149 2004 4 TCONS_00093569_9 107 5 0.62089891902143 0.00536976527308702 0.0017548109505605 0.0022686067342361 5.97907638071836e-13 0.000650957743486176 0.000449301754917671 0.00161517877296901 0.00187614622991944 0.000493322641965798 0.000154121750904147 4.01364303171638e-05 9.43998211059725e-07 0.000461702395507882 0.00059638671492595 6.43181318440888e-06 0.00355912740621356 0.00496912538190025 0.00253565105626054 1.56976388759926e-18 0.001760625724911 2.85780693083357e-05 1.8399011876288e-11 0.00555290679832948 0.00218504411283506 0.00251209041935135 0.000815326580307304 0.0019171046432224 0.0025396020074146 0.00142397016782264 0.00175709176917295 XM_005228596.1 PPP1R9B PREDICTED: Bos taurus protein phosphatase 1, regulatory subunit 9B (PPP1R9B), mRNA. 0.0 3608 100.00 0.99750499001996 NM_032595.3 PPP1R9B Homo sapiens protein phosphatase 1, regulatory subunit 9B (PPP1R9B), mRNA. 0.0 2093 83.14 0.99750499001996 TCONS_00093569_2 sp|Q6R891|NEB2_MOUSE NEB2_MOUSE Neurabin-2; 8e-62 203 100.00 0.989795918367347 0 noncoding 0 0 0 0 -0.0301876978959921 0.772239591810249 0.0159032921354137 0.821043712594154 GGCTCCAGATTAAGCATGCTGTGACTGAGGCCGAGATCCAGCAGCTGAAGAGAAAGCTGCAGAGCCTGGAGCAGGAGAAGGGGCGGTGGCGGGTGGAGAAGGCCCAGCTGGAGCAGAGCGTGGAGGAGAACAAGGAGCGCATGGAAAAACTGGAGGGCTACTGGGGTGAGGCCCAGAGCCTGTGCCAGGCTGTGGATGAGCACCTGCGGGAGACCCAGGCCCAGTACCAGGCCTTGGAGCGCAAATATAGCAAGGCCAAGCGCCTCATCAAAGACTACCAGCAGAAGGAGATTGAGTTTCTGAAAAAGGAGACAGCACAGCGCCGGGTTCTGGAGGAGTCAGAGCTGGCGAGGAAGGAGGAGATGGACAAGCTCCTGGACAAGATCTCAGAACTGGAAGGAAACCTGCAAACACTGAGGAATTCCAATTCTACTTAACAGGAATCATTCCTTAACCGGACAATAATTAATCCCCTCCCATTGTCCTCCCTCCCCTGTCCTCAATACTTGACCCCGCCCCCTATCAGCCTGGGGACAGGTGCCCCGACTTGCCCACGCCTCCACCCCACCTCACCCAGCTTCAGGGACCAGAGGGCCCACATCATATAGGCCCCGTAAGGTGGCCCAGGCAGACCGGTGGCTGGAAGGATGGCCTCCTTGCCCATGGGGCTGGGGCACAGAGGCCATGGAATGCCAGGGGCTGGCCTGGGTGGTGGATGAACACAAGGACCTGCAGACCAAACTGCCAGATTTTACGGCCTCCAGCCTTTGTCTCTGGACTGGAACAGGGCTGGGGGCTCTCCCAGCATCTCACCGCCTGGAGGCTGCCTCCTGATCATGGAGCTCCTAGGTGGTCCCTGGGCCTCTTGACTTGAGATTCTACCATCTTGGCCCTTCCTTCCTCCCCTATCATTGTGCTGTTCTGTTGCATTCTTATCCTCCTGCTGGGAAGGGTTGTCTCCACACCTCCTCCCATCCTTGTCCACCCTCCCAGGAGGGATAGAGTCCACTCAGAGCCTGGAGGCTGGGCCTGACCCTGCACTGATTTCTTATGAATCCTTCATGAAAAGGGGAGAGCCCAGGACATGTGGTGTCCAGCTCCCCCTTCTCCTGGGGCAGCAGCCCTCAATTTCTCCTTGTGCCTCCCCTCCCCCAGGTGCCAAATAGCCATAACCTCCTGGAACCATTCTGCGGCCTCTCTGGGGTCCAGGTTTCCTGGCCAAGCCTGTCAATGCAAGGGAGGAGAAGAGGTCAGTTTAGAGGGCCTGGTTTTAGGCAAGGGGAACATTTCTTACTGGAGAGCCAAGTCCCGTCCTGCCCTATGCAGGGCCACACCTGGAAGCCTTGTACTAACATCAGAGATTCAGCCTCACCCCACCCACACCCACAGTTTTCCAGTGTTTTGACTGGAGGGCAAAATTTTACTACTTTTCTTCTTTTTGGAGACCAGGGCTGCGCTGCTAGCAGCCTGCTTTCTAAGTGAAATCGACTCTGTTTCCCCACTTTAACCCCAAATCGGGGCTTGGACCAAGGGAGGTGAGACCCCTACCCCAGGTCCCCTCCCCTTTCAGAAACCATCTCATTTTTGCCTCTTCGTCATGCCCCTGCCTCAGCCTGGGTTTTTGTTCTTTTTTAAAAAAAAAAACAACCCCTGTACCATCCGTTTTGGCTTCCTCTCGTCCCCTGTAAATAGGCCATGCCATCAATCAGTATTTCTCAGCAATCTGTTCCTGCCCCCAGATGTGCGCCTACCCCGTGAAAGAGCTGGCTATCTTAGTGCCTGGGCCCGTGCAATTCACCTCCTCGGCCTCAGCAGACGGAGGGGGCGGGGCCAGGGGCGGGGCTGTTGGGGGGGCTTCCGGTTTCTCCGGCCGAGGGCCACCCTAGCCCCGCCTTTTGCAGGACTGCGTCTCTGTATATAATATATATATGTATGTATTGTTCCCGGTTTTGTACGGATCATGCCCTCTGTCAGGTCACTCCCATAAAAGCAGTCCCCAGAGCT TCONS_00093570 s 5' 2362 TCONS_00093570 s 5' 7635 EMBV3_00992 CAAGATGACCATATAAAGGGCCCACTAAAGTTTTTGATGATGGTGATGAGAAAACGTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39715 GCATTGGAATGGGCAACCTGGGACCTGCAGGCATGGAAGGACCCTTTGGTGGTGGTATGG Variant GeneID:515290|HNRNPM:XM_002688876:102_cdna 957^1001 4 EMBV3_42475 GeneID:515290 7 GENE HNRNPM HNRPM heterogeneous nuclear ribonucleoprotein M EMBV3_17936 CCAACCGTCCCCTTGGCTTGATGAGTCTGCTTCATATATCCATGCCCACAATGTGCATTC Gene BVT0102_056680 - 0 NULL GK000001.2:130662685-130685148 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002158 TCONS_00002156 TCONS_00002159 TCONS_00002155 TCONS_00002160 TCONS_00002161 TCONS_00002162 TCONS_00002154 1 XLOC_000526 Coding TCONS_00002155 XLOC_000526 Coding Coding TXLNA 1:130653062-130665777 j TSS1091 4625 1 TCONS_00002155_1 371 11 0.637092968381312 0.00357413831807611 0.000274302999615422 0.00259374750424852 0.00179177159620633 0.00134226654815942 6.51030910228671e-07 0.000435316814637362 0.00182990131517449 0.000370522198181549 0.000278106656562683 5.42796856916032e-05 1.47248304206262e-08 7.26621507880108e-12 7.9805952406357e-05 2.02327336917964e-11 1.13289168134551e-06 1.01578863379662e-06 0.00046448444431291 0.0015252126941095 0.00210733225903298 0.000139105520214414 0.00143086820892142 0.00113028288577416 0.00140824992141718 0.00242716457683854 0.00143017596267092 0.00214225331703622 0.00103877669115663 0.000537738850909703 0.00133892824089792 XM_005197573.1 LOC100852159 PREDICTED: Bos taurus alpha-taxilin-like (LOC100852159), transcript 0.0 8163 99.28 0.986162162162162 XM_005270594.1 TXLNA PREDICTED: Homo sapiens taxilin alpha (TXLNA), transcript variant 0.0 2830 83.17 0.576864864864865 TCONS_00002155_1 sp|P40222|TXLNA_HUMAN TXLNA_HUMAN Alpha-taxilin; 0.0 692 95.42 0.997304582210243 1 coding 0 0 0 0 -0.116980140283983 0.608834407988561 -0.0230623624738549 0.614882795111814 CAGGGTTTCCGGTGCGAGGCCAGAGCGGGCGAAGCCGTCGGGGCGTCGGCGGTGGGGGAGCACAAGCCAAGAGTGCTCAGTCTGGAGCCCTCCGTGATGTCTCTGAGGAGTTGAGCCGCCAGCTGGAAGACATCCTCAGTACATACTGCGTGGACAACAGTCAAGGGGGCCCAGGTGAGGATGTGGCACAGGGTGAGCCTGCTGAACCCGAAGATGCAGAGAAGTCCCGGACCTATGCCTCAAGGAATGGGGAGCCTGAGCCAGAGACTCCAGTAGTCAATGGTGAGAAGGAAATCTCCAAGGGGGAGCCGGGCCCGGACGAGATCCGGACCAGTGATGAAGTCGTAGACCGAGACCACCGAAGGCCACAGGAGAAGAAGAAAGCCAAGGGTCTGGGAAAGGAGATCACATTACTAATGCAGACGCTGAACACGCTGAGTACCCCTGAGGAGAAGCTCGCAGCTCTGTGCAAGAAGTATGCTGAGCTGCTGGAAGAGCACCGGAACTCCCAGAAGCAGATGAAGCTCTTGCAGAAGAAGCAGAGCCAGCTGGTGCAGGAGAAGGACCACCTGCGCGGCGAGCACAGCAAGGCTGTCCTGGCCCGCAGCAAGCTCGAGAGCCTCTGCCGTGAGCTGCAGCGCCATAACCGCTCCCTCAAGGAAGAAGGTGTGCAGCGGGCCCGGGAGGAGGAGGAGAAACGCAAGGAAGTGACCTCGCACTTCCAGGTGACGCTGAATGACATCCAGCTGCAGATGGAACAGCACAATGAGCGCAATTCCAAGCTACGCCAGGAGAACGTGGAGCTGGCTGAAAGGCTCAAGAAGCTGATTGAGCAGTATGAGCTGCGGGAGGAGCACATTGACAAAGTCTTCAAACACAAGGACCTGCAGCAGCAGCTGGTGGACGCCAAGCTCCAGCAGGCCCAGGAGATGCTGAAGGAGGCAGAGGAGAGGCACCAGCGGGAGAAGGATTTTCTCCTCAAAGAGGCTGTGGAGTCCCAGAGGATGTGCGAGCTGATGAAGCAGCAGGAGACCCACCTGAAACAGCAGCTTGCCCTGTACACTGAGAAGTTTGAGGAGTTCCAGAACACTCTTTCCAAAAGTAGTGAGGTGTTCACCACATTCAAACAGGAGATGGAAAAGATGACTAAGAAGATCAAGAAGCTGGAAAAGGAAACCACCATGTACCGGTCCCGGTGGGAGAGCAGCAACAAGGCCCTGCTTGAGATGGCCGAGGAGAAAACACTCCGGGACAAAGAGCTGGAGGGCCTGCAGGTGAAAATCCAGCGGCTGGAGAAGCTGTGCCGAGCACTGCAGTCAGAGCGCAATGACCTGAACAAGAGGGTGCAGGACCTGAGTGCTGGCAGCCAGGCTCCCCTCACTGACAGTGGCCCTGAGCGAAGGGCAGAGGGGCCTAGGGTTCAAACACCGAGCTCCCCAAGAGCCACAGAAGCTCCTTGCTGCCCCGGAGCACTGAGCACAGACCCTTCAGGCCAAACGGGGCCCCAGGAACCCACCTCCATCACCGCCTAGGGTGCCCATGCCAGGGGGCGCTCTGGGAAGGGAGTGAGCCGCTCAGCCAGGCCCGGCCTGTGGGAGGCTCCCACCGCTGAGGCCCAGGGTGCTTTGACCTGGCTGACATCTGACTGCAGTTTTGGATTTTATGGGTCAGTTCTGCATACATACGGCATATGTGCAAGGCCTCATACATTTATATCTGTAAGTGTACAACGGGCTTGCATCACAGGTGAGGGTGTGTACACATCAAGTCAGTGGCTCTTCTGTGAGCTGAAGCGTCTTAAAGGGGAGCTGCCGTCACAGTAAGCTGGCAGGACAAGTGTCTTGAGCTTTTCCCTGCCCGATGTGAGGCTCACCCCTCCCTCCCTGCCCTTCAGAGCTCATGACAGGTGACACACCCAGGCCATGACTGTGTTTCTCTTAGCGGGACTTGGGCAGCTCCAGCTCTCCTAGCTCCCCTGGAAGCTCCTTTGCTTCCCTTGACCTGGAAAAGGGGTCTCCAGGCAGAGTGTTGACAGAGCACTCGGAGCTGGTGATCAGACTGCTTCCCTGCCTAGGACGAGGGACCTGGAGCGTGTTCTGTGCAGGGTGATGTGCTGGTAGGGAGCCCCTCAGGTGCCGCTTCCCCTGCGTGCTGGTGGTGCCAGGACCAGGCCAATGATGCTTCGCAGTAGCCTTATCATTCACAGGTGCCTCTCTAGCCTGCACAAATGACGGACAAGAGATCACCCAAAGGATTCTTTCTGAAGGTCTGGGGTTTGGTTTCCTTGGTGTTTGTTTTGCACATGACAGTGTTTGTATTGAGGCTCTTCTGAGGAGGAGGGGGTGCTCTACCAGTGGTGCCTGGGTTCCTGGCCTCTAGCGCCCCACCCGCCTCAGCACCCTGCCTGGCACCTTTGCCGCATTGGTGCTTAGGTTTCCTGCTTGATGAAGTCAGATTATTTATAGTAAGAGAAAGGAAAGGGTCCCCATGGCTTTGCCACAAGCTTACCAGTGGCTTCAGTCCTGGGTGGCCACTGCTGATGCCATCACTGTCTCCCCGCGGCAGATGCTGGGCCCTGGGTCCAACCGTCCCCTTGGCTTGATGAGTCTGCTTCATATATCCATGCCCACAATGTGCATTCTTTTTTGAGATTTGCCCTGATTTTGTTACCCACGTAATACGAGCTGAGATATGCCCTCCTTGACATCCTACTTGTTCTGTGTGAGACCCGCCAGGTCTTGTCCAACAGCTAACGGATAAGAATGAGGCTCAGCCATTGACTGAGCCCCGGAAGTCCAACAGGTCTTGTCCAACAGCTAACGGATAAGAATGAGGCTCAGCCGTTGACTGAGCCCCGGAAGTCCAACAGGTCTTGTCCAACAGCTAACGGATAAGAATGAGGCTCAGCCATTGACTGGGCCCCGGAAGTCCGCAGAAGGGCTACAGATAGTTGTGTCTGTTTCTATTCCGACTCCCACCCCTCACACATGCTGCTCTGTACTCTGAAACACCTACAGTTTGCAAACTTGCCAGAGCATTAGCCAGTCTTTATACAAAACACTTCTGGGACAGCAGAGTGTATGAGTCTTGCATCAGGAAGCAGGGGTACGCTGGGTTTGGGGGTACCATAATCCCATCTCCAGTTGGGCCTCAGCTTCATTGTAGCTGTGGAAGCCATAGACCAAGATGGATTGAGTGGATGAGTTTTTGCTTCTTGCTGTATTTCCTTGAAGTTAGTTCATTGTCTTATAGCTCCTTTCATCTTCCACAAATAGCCCGCTCTTAACAGCTCTTAAATCCCTCAGGTGATAAGGTTCATAAAGAGTGTGAAGTACTCCTGAATTACGTTAGGACTTAAACCAGAGATGGCAAATGAATGACACACCATTTCCCCTCTTCATCCATGGGTGGTACCACTAATCTGCTTCTGAGTATTTCCTGCTAGATTCCTGGTATACCCTCATTTCTCAAGATTCCCCCAGCAGCCAGTGTGAGTATTGAGACCTATTTGCCATCTCTGGCTGAGATCCTGCTCTGCTGAGGAACAGAAGAGCTGCCAACAGGGTTTGCTGGGCTAAGGAAGCACGGGAAGAGGCAGAAGTTTCTGCCTGCCCCCTTCAAAGAGCAGGGAGGCCTGCAGTGGCCCACAGGATCACCTGCCCCACTTCAGCTACCTCTTAAAGCCTATAGTGTTGGCAGGGAGGGGACTGCCAGAGCCCAGTATGGTGTGGCAAGTTACAGTCTTCAGAAGCCAAGTCTAGCTGCTTGGTGAGCAAGGTGGCCCCAGCTGTGCAGGGTAGGAGCTCTGCTCTCAGCTCAGCCGTCCGTCTGTAGCCATCCAGGCCAGGCTGTAGGTGGGGTCCCATTGTCTCCGTTGACCAAATCTTTTCAATCACTACAGCTGCTCTGCTTGCTCTGCTTTCCAAAGTCAGCCCAGGTTCCTGGGTGCTGCCCACACCAGCCAGGGTCCTGGGCCAGATGAAGAGGTGGCCTATCCATGAATGAAGGCCAGTTCCTTCCTCACTGGGGCAGGTCTCATGCCCATGACCTCAGTTTTTGGACCAAGAGCTGTGTTGGTTTCTTAGATTGCTAGCTTTTCCTCTAGGGGACCACCGTGGGTGAGGCTCTGCTGACAGTAACTTGTGTTCAGGGTCTTGGCCAGCTGAGAGCTTCGTGTACACCAGATTCTGAGAGGTGGCAGCAGCACTTTTTAAAAAGTTTGTTTTCTGTGCGGTTTTTGGACCATGGGCTGCGCTCAGGCACTTTCTATGAGAGAATGTTATGTCTGTAAAGGAGGGTTATTTCCCCGCCCCCGCCCCCACCCTGGTGTCGGTCGGGGAGGGCCCAGGCCTGCTGAGGTGGTTCTCGTGCTGCTGCTCCAGCCCTCCCACCTTGCACAGCACAGAGGAGGTCACCCTAGGGACAGCCAGGCACCTGCCTGGGGGAGGGGTGCTGCCTTCTGTCCCTGTAACTGCTTCCCTTATGGCCCAGCCTGGCCGTCCAGATTTGTTTGAAGCTGTGCAGACAGCTTTTTTGTCTCCTTTTGGTATTCCCAACAGCCAGGGACTTGATGTATTTTAAATCCACGTTAAATAAAGAGTCTGTTGCCTTACTTTCTCTCCCAG EMBV3_29085 GGGTGTGAGTAAAAGCAATGGGAAAGCAGCAATAGGTGATCCTGGTCGTGCAAGCATGTC Gene GeneID:512493|LOC512493:XM_002699975:46_cdna Constitutive 0 NULL GeneID:512493 X GENE LOC512493 NULL similar to KIAA2022 protein EMBV3_38649 CATGCCATGGCCCACTACATTGTGAAAATGGCAGCATGGTGATTCATTTGATGCTTCCAG Variant GeneID:509253|MGC152190:NM_001075398:8_cdna 447^528 2 EMBV3_19741 GeneID:509253 4 GENE MGC152190 NULL hypothetical LOC509253 EMBV3_12113 CATCAAGCCTGACCGAGCCCACCACTGCAGAGTGCAGCTCCTTCTCGCCGCCCACCACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08291 GGTCTTCTGCCCCTCCATCACAGAGTAGCACCATATGCCAGTATTTGGACAAGGAAAGAG Gene BVT0102_106186 - 1 EMBV3_31563 GK000002.2:104560644-104589104 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08122 CACTCAGCCTTTTTCTTCATTCACGCTTCAGTGCTGGGACGCTTGCTGCTTCAGTAGGAA Gene BVV0102_238308 - 1 EMBV3_13068 GK000001.2:70838108-70841811 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01380 AGTTCATCTCGGGCACGCCCTATGTGCCGCTCAACTGGTCGAAAGGGCTGGACCCAAAGA Gene GeneID:100298877|LOC100298877:XM_002683894:2_cdna Constitutive 0 NULL GeneID:100298877 Un GENE LOC100298877 NULL hypothetical protein LOC100298877 EMBV3_27594 TTCTCACATCAATTTTGCTTAGAAAGAGAGCCGAGTGGCCTGGAGGCGGGACCTTCCTCT Gene GeneID:100300030|LOC100300030:XM_002698437:416_cdna Constitutive 0 NULL GeneID:100300030 26 GENE LOC100300030 NULL hypothetical protein LOC100300030 EMBV3_26578 AGGAGGACCCCTAGAAGCTCCCATTTGGTTTCAAAGCAGCACAATAGAGCATTTCCTTAG Gene BVT0101_027043 + 0 NULL GK000030.2:33635001-33636322 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244107 TCONS_00244103 TCONS_00244106 TCONS_00244101 TCONS_00244105 TCONS_00244100 TCONS_00244104 TCONS_00244099 TCONS_00244102 1 XLOC_150356 Coding TCONS_00244107 XLOC_150356 NonCoding Coding MTMR1 X:33624516-33636273 j TSS183514 2636 2 TCONS_00244107_2 99 0.0538694992412747 4 0.776114324600204 0.00344969789663549 0.00603301180172729 0.00191188571710925 4.26578762640969e-28 0.0002043075571861 0.000233945569188266 0.000473450368214389 0.00088298994961569 0.000213482674538007 2.37529950841501e-138 2.0754269160646e-05 0.000906011802963137 1.0277182934369e-05 0.000589482849866135 5.04017229784177e-05 0.00258853272766137 0.00191755322540988 0.000697509776921544 0.00291223155873167 4.99312172406167e-05 0.000745402591795001 0.00064369101669651 0.00103085133954349 0.00041908724353978 0.00849523604071081 0.002763310341013 0.00252346939415174 0.000448102141157989 3.67886078482198e-05 0.000203179576671614 XM_005227600.1 MTMR1 PREDICTED: Bos taurus myotubularin related protein 1 (MTMR1), 0.0 4318 100.00 0.907814871016692 NM_003828.2 MTMR1 Homo sapiens myotubularin related protein 1 (MTMR1), mRNA. 3e-158 563 87.34 0.172230652503794 0 noncoding 1 1 1 0 -1.01552772172245 0.0104661428765156 -0.00755929517599384 0.871534666387556 GCAACAAAAGTAATGATGGTTACATTCAGGTTAAGACTAAAAGTTTCCTTCGGCATTCGAGTTTAATGAATTCTTCTTGATTACAATTTTGGATCACCTTTATAGTTGTCTCTTTGGGACTTTCTTGTGCAACTGTGAACAGCAACGACTCAAAGAGGATGTATCTACAAAGACTGTATCTTTATGGTCATATATCAATAGCCAGCTGGATGAATTTTCTAATCCCTTCTTTGTGAATTATGAGAACCACGTCCTCTATCCTGTTGCTAGTCTGAGTCATTTGGAATTATGGGTAAACTATTATGTGCGATGGAATCCACGAATGAGGCCTCAGACGCCCACCCACCAGAACCTCAAGGAGTTGCTGGCCGTCCGCGCAGAGCTGCAGAAGCGGGTGGAGGACCTGCAGCGGGAAGTGGCAGCACGTGCCTCAGCCTCGTCGGAGCGGGGCTCCTCGCCATCGCACTCAGTGACACCCGTGCACACGTCAGTCTGACACCGCTGTCCCTGTGGCCCAGGCGGGGCTCCTGTGACGTTCCTCACGAAGCCCTGTGCCCGCCTCGTCCGGGTGGCGCTTCCCACCAGTGACGGATCTGTGCTAGGGGACGGCCCCCACTCTCATCAGTGCTGTTGTGCCATCAACACGTCTTTCCCTCCTGCCAGCACTTGCCCAGGGCTGTGTGGGGGACCCTTGGGCGAGTAGAATGCAGGGTTCAGGCTCAAGGTGGGACATCCTTGTAAAAACCAACCCACCCCCTTTTAAAGGCTGTGTTGCCAGCCCCAGGGCCTCTTTCGGCTCTTAGCGCCAAACCCTGGGGCCTGACAGTTAACTCTTGGCTGGGGAAGACAGACCATCACCATCTCCCCATGCCAGCAGTCCTGCTGCACCAGTTACCAGTGTGTACATATAAGGTATTTTTTAAAAAGAGAAACATACCTTTATTTTCCTATGTCCTTTTTTTTTTTTTAAATGTTTAGTCACCGAAGGAGACACCTGCTTGACTGAACTGGGTGAGCATGGTCAAGCTGGGCTCATGCGAACTCTGCCGTGGTTCATTTGAATGTGGTCACCTCAGACCATGTGTCCTGTCCTCCCCTGACTGTGGGACCTGCCTCCCAAGGTGGCCCAGGCGCCTGTCCCCTGCTACTGCTGACAGCTGACTGTCAAGGCGGGTCTTCTCTCACCTGTTACCTGCTGTCTGAAGTAATAGTTCTCATTTCATCAAGATCCCTTCAAACTCAGTTTATCCTTGTCACTGCATTTTGGTACTTTAAAGCCACCACGGCACTGTGACTTTGGATGCCAAAAGCAGAGCGCTCACCTCCCTCAGTTTCCTGGTCTCAGGGCCTTTTCCTGCCCATCTCACAGCTTCCGTCTCTGGCTCCAGGACTCCATGAGTCTGAGCAGGCATTCACTGACCATCAGACGCTCCATCCACTAGCACTAGAGCTCTGAACTGCTCTGGGTGGTGAGTCAGAGTCTTGCACATTTGCACTCTGCCCTCCTCCTCCTCATGCCCAGCACTGTGCCCATGCCTGCCAGCCCCCAAGACCCCATCCCCCTGGAGGAATTAAGCTTGCCTTTGAGTGGAGGAGAGCTCACCGGGTGAGACCTGAGTGCAACCTCATGGTAGTATCTGGTTGGTTTCAAATTACTGGATGCTACCCAAAGCTCTCCATATTGACCTTAGTTTTGAAAACATTCTTAAACGTTTTTTTACACTTAAATACTTAAGAGAATAGATGTTTTTCAACTTGGAACCTTCTGATTCTTATAGAAAATTATCTGGTATCTGTAAGGTATCATATTTATTCTATGTAATTTGATAACCTAAAAAAAATTCTCCATGTTTACCATCTGGGGGATTTGTTTCTAAACTGCATTTTAATTGATGTAACTTTTGATTCCTGCTTCCAGAATAGCTAAAAGCTTATTTATGAATGGGTATGCTGGATTATTCATTGATACGTGGGTTTCTTACAAATGGGGACCCGTTTTTTTCCTTGGAAATATCTATACATAATCCCCCCGCTGCACTAAGACCACTAACCTTGTTGTGGACTGGATGATGTTTTTGAGAACGAGAGAAGTCAAGGTCAGCTAGCCTGCCGCGGGGATTGCACCTGCAGGGAGCTGCCCCACTCCACCCCTCCCCCTTCCATGTGCTGGGCCCTAGGAGGACCCCTAGAAGCTCCCATTTGGTTTCAAAGCAGCACAATAGAGCATTTCCTTAGTGTCTTCCTAGCACAGAACTGTTTCTAAAACAACTTGAAGTATAGTTTTGTTATGTAAGCAATTCTTTCTCGGTTTTATTTAAGTGTACTAGAATGTAAAACCTTTATGGTTCAGGTTTTTAAAGACTGGTACAGTATGATATTTGCCTCATCTGATGCACTGTATTTCAATCTGTAATTAAAATAATGTTTGCTCTGTGGTCTCATTTTTTGTTGTCTTTATTTTTGGTAATTTTTCCCTTGTGGAAAATTAGTAAACATTTGTGTCCAAGTCTTTGCGACCCCATGGACTATAGCCCACCAGGCTCCTCTGTCCATGGGGATTTTCCAAGCAAGAACATGGGAAGGAGTTGCCATTCCCTTCTCCATTGGATCTTCTCGAGCCAGAGATCAAACCTGGG EMBV3_26317 CTCAGCAGCCCCTCCTAGGAACCCAACGGTACCATTACAGAGAGGAGACAGTGACACAGA Gene GeneID:100125266|LOC100125266:NM_001103322:2_cdna Constitutive 0 NULL GeneID:100125266 2 GENE LOC100125266 MGC165688 alkaline phosphatase-like EMBV3_28201 GATGGGAACCAGGTGGAAGCCCAGAGCCCAAACCGAGCATCTACATCTGCTGATACAAAT Gene GeneID:100138434|LOC100138434:XM_002690220:6_cdna Constitutive 0 NULL GeneID:100138434 9 GENE LOC100138434 NULL similar to laminin, alpha 2 (merosin, congenital muscular dystrophy) EMBV3_01603 TAGCAAAATGACCGCAGCTCAGAAGGCTTTGGCTAAAGTTGACAAGAGTGGAATGAAAAG Gene GeneID:509258|RNASEH2B:NM_001166566:67_cdna Constitutive 0 NULL GeneID:509258 12 GENE RNASEH2B NULL ribonuclease H2, subunit B EMBV3_02318 TTCAGCAGAGACCTTCAGAAGACGTATTGCAGGATTCTGTAATAATGAACATGTGGAAAG Gene GeneID:286767|PTHLH:NM_174753:2_cdna Constitutive 0 NULL GeneID:286767 5 GENE PTHLH PTHrP parathyroid hormone-like hormone EMBV3_11953 ATTCTGCAGAATGTTACTACAACATACAAGGGTCCTGGTGGAAAATGTGGAAGATCTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21331 ACACCTCCCTGAAGCTGTGGGATCTGAACTTTTGTGTCGTGACGCCTTTCTGGATACACA Gene GeneID:508608|PGAM5:XM_002694449:42_cdna Constitutive 0 NULL GeneID:508608 17 GENE PGAM5 NULL phosphoglycerate mutase family member 5 EMBV3_15056 AATTGGCCTTTTGTGATAAGCTTGAGACTCCTATCTAATAGGCAGGAGTCACAACCACTA Gene BVT0102_203883 + 0 NULL GK000001.2:84689040-84722524 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25041 CAATGAAGCAAAGCACAAGGATTATTAATAACATCCAGAGTAATAGTTACAAGGGACTGA Gene GeneID:783627|C9H6ORF189:NM_001101289:37_cdna Constitutive 0 NULL GeneID:783627 9 GENE C9H6ORF189 FAM162B chromosome 6 open reading frame 189 ortholog EMBV3_19004 CAGCCTGATCTCCTTACCCTGCCCTTTTTTCACCTCAATGCAGAACACCTTCCAACGTAC Gene BVV0102_058878 - 1 EMBV3_10428 GK000018.2:46996556-47018463 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24419 TTACTGATACCTACCCTCGCCCCTCCCAGCCCTCCGTAGTTGGCATCCATTTGCTTTTAA Gene GeneID:615470|SLC25A13:XM_002686663:110_cdna Constitutive 0 NULL GeneID:615470 4 GENE SLC25A13 NULL solute carrier family 25, member 13 (citrin) EMBV3_21841 CGCAGGAGGAGATTCGGGACGACAACCCGCACCTTTTCCTAAACCTTGCTGCAAGGCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01736 TGCGGCTTGTCGCAGGCAATGGAGTACAGGTTCTCGCTCTCGTGCTTCTCGTGGAACATG Gene GeneID:100297465|LOC100297465:XM_002685159:146_cdna Constitutive 0 NULL GeneID:100297465 1 GENE LOC100297465 NULL hypothetical protein LOC100297465 EMBV3_27005 AACTGGACGGCTGGCCTCCCCTCGAGCATTGTAACCCGGATAAAAAGGCAAGATATCCTT Gene GeneID:521059|LOC521059:XM_002689469:6_cdna Constitutive 0 NULL GeneID:521059 8 GENE LOC521059 NULL similar to Prostasin precursor (Serine protease 8) EMBV3_22753 ATGACAGCGCCATCGCCCCGTCTAGTGAGGACGGAGACCTCACAGACACTGTCAGCGGCC Variant GeneID:515552|PLEKHM2:XM_002694198:702_cdna 710^769 2 EMBV3_39440 GeneID:515552 16 GENE PLEKHM2 NULL pleckstrin homology domain containing, family M (with RUN domain) member 2 EMBV3_19271 AGACCCAGTGCTTCGACCCGCTGGTCCGCAACTGTGTGGCCTGCAGTCTCCTCCGGACGA Gene GeneID:618516|TNFRSF13C:XM_002687967:86_cdna Constitutive 0 NULL GeneID:618516 5 GENE TNFRSF13C NULL tumor necrosis factor receptor superfamily, member 13C EMBV3_30147 CCTGCAAGTGACAGGGGGCAGGGCGGAAAGATGAAAAAGCTAATCCCTTTTCTTTCCACA Gene BVT0102_268599 + 0 NULL GK000023.2:8441521-8469768 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21697 TAGACTTCTGTGGCCCCTGTGAAATAGACCACTTCTTCTGTGACCTCTTGCCTATCCTGG Gene GeneID:784787|LOC784787:XM_002697442:34_cdna Constitutive 0 NULL GeneID:784787 23 GENE LOC784787 NULL similar to olfactory receptor Olfr118 EMBV3_06107 CGAACAGCTACATCTACCAACAGGGCTGCGAACGGAATCTCTCCAACTGGTTGACCAACA Gene GeneID:508751|CD37:NM_001046011:154_cdna Constitutive 0 NULL GeneID:508751 18 GENE CD37 MGC137588 CD37 molecule EMBV3_32554 AAGGCCGACATCTACTCCTTCGCCATCACCCTCTACGCCGTGGTGGCCTACCACCTCCGG Variant GeneID:444869|MOS:XM_002692654:78_cdna 914^967 3 EMBV3_10755 GeneID:444869 14 GENE MOS C-MOS v-mos Moloney murine sarcoma viral oncogene homolog EMBV3_00119 AACATTGAAACAGTCCATGGGATTGCAGGGTTGGACACAACTGAGCGACTCAGTACAGCG Gene GeneID:509432|ASPA:NM_001046033:60_cdna Constitutive 0 NULL GeneID:509432 19 GENE ASPA ASP MGC137381 aspartoacylase (Canavan disease) EMBV3_09419 GCTAGAACTTCTTACTGACAAGGATGCTCGAGACTGCATTTCTTGGGTTGGTGATGAAGG Gene GeneID:510204|GABPA:NM_001075437:13_cdna Constitutive 0 NULL GeneID:510204 1 GENE GABPA MGC142634 GA binding protein transcription factor, alpha subunit 60kDa EMBV3_38396 AAGTACTACCCAGTGGTCTTCCGCCAAGCGGTTGAGTGCGTTCTGCTGGTCTTTGGTGTA Gene GeneID:520317|LOC520317:XM_002699665:18_cdna Constitutive 0 NULL GeneID:520317 X GENE LOC520317 NULL similar to melanoma antigen family A, 10 EMBV3_37423 ACAGGCCTACATGAACTTTCACTACAAAAGCACCGAGGGCTGGAGCATTGGCAACGTGCT Gene GeneID:613527|CTNS:NM_001102264:165_cdna UTR3_Alt 3 NULL GeneID:613527 19 GENE CTNS MGC166375 cystinosis, nephropathic EMBV3_29558 GGCAGACACACTCACTCAAGTAGAAACCAAGTACGGGATTTCTGTTATAATACGAGATAC Gene GeneID:532822|QRSL1:NM_001046336:3_cdna Constitutive 2 NULL GeneID:532822 9 GENE QRSL1 MGC137680 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 EMBV3_30083 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41583 TTCTCCTGGCTCTCATCGAAGGGGCTGGCATCTTGTTGACACGCTTTGCGTCTGCACAGT Gene GeneID:509797|TIMM17A:XM_002694116:448_cdna Constitutive 4 NULL GeneID:509797 16 GENE TIMM17A NULL translocase of inner mitochondrial membrane 17 homolog A (yeast) EMBV3_32466 TGCACAACGCCCTGTGAAAGGACAGTCTTGGCAAAGCAGGAAAGTACTCATTTTTGTCTG Gene GeneID:100297269|LOC100297269:XM_002692727:182_cdna Constitutive 0 NULL GeneID:100297269 14 GENE LOC100297269 NULL hypothetical protein LOC100297269 EMBV3_18867 CAAAAGACTAATAGGTGAATTTGACCAACAGCAAGCAGAGTCATGGCACTAGAGCTCTGC Gene GeneID:782605|ELL2:XM_002689398:29_cdna Constitutive 0 NULL GeneID:782605 7 GENE ELL2 NULL elongation factor, RNA polymerase II, 2 EMBV3_12258 TTTCTCAAAAACCTTCACATCTTGGTCAAGGCAATTATTTGGCAGAAAACTAGAGTATCA Variant GeneID:529491|PMS1:NM_001077981:36_cdna 519^682 3 EMBV3_00759 GeneID:529491 2 GENE PMS1 MGC152061 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) EMBV3_32660 ACATTGCATGTTGACGAGAGCCAGCGCCCGAGGCACAGCTGGTGTCATTGTAGGAAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36497 TTATTCCTTTTGCACTCCCCCATCCCCACCTTTGTGTTGGAGTTTACTGTGTTACCCTGT Gene GeneID:338082|ATP6V1B2:NM_176671:2_cdna Constitutive 2 NULL GeneID:338082 8 GENE ATP6V1B2 NULL ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 EMBV3_14680 GGCCCCCTCTTTTTAACATTCTGTAACATTTTGCTCAAGCTGGGCTGTAAGACGGTCAGG Gene GeneID:510455|RBBP5:NM_001083402:46_cdna Constitutive 0 NULL GeneID:510455 16 GENE RBBP5 MGC138131 retinoblastoma binding protein 5 EMBV3_06946 ATGGGCCCGAGTTGGGGGCAACATCCCGGGGAAATCATCGAGTTCCCCATCCTGAAGCTA Variant GeneID:540516|ERI3:NM_001113242:277_cdna 367^720 5 EMBV3_40192 GeneID:540516 3 GENE ERI3 MGC134375 PRNPIP ERI1 exoribonuclease family member 3 EMBV3_31880 CCTAGAGAACTGTGCTCCCAGCCTCACCAGGGTCTCATGGTAAAACTCTGGATTTAATTT Gene BVT0101_074288 - 1 EMBV3_08762 GK000005.2:57454986-57455440 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192085 TCONS_00192080 TCONS_00192079 TCONS_00192087 TCONS_00192081 TCONS_00192086 TCONS_00192084 TCONS_00192082 1 XLOC_117087 Coding TCONS_00192082 XLOC_117087 Coding Coding RNF41 5:57428210-57459140 j TSS143817 6093 3 TCONS_00192082_3 176 0.201870999507632 6 0.803194413010443 9.56867303715809e-14 0.000365402460248868 2.93438545118342e-06 5.95818681172953e-11 0.00110972412862883 5.00255875632546e-15 0.000317173149806033 0.000787805115504345 2.532415574358e-08 4.03660901338524e-08 2.57171196073365e-12 6.75909070687736e-11 1.58337476036414e-13 3.50361745974907e-05 0.000174993241349209 7.92793910579211e-07 0.00102957510573797 0.001792361639381 0.000428600673465132 0.00129339749146832 0.000476235204341574 0.000375450572217369 0.000547944899457708 0.0017926630408475 0.000824973977617647 0.000642664100684 0.000384509593199696 1.49260272899709e-16 0.000268107410182693 0.000291656065598836 NM_001046525.1 RNF41 Bos taurus ring finger protein 41 (RNF41), mRNA. 0.0 2607 99.86 0.237978007549647 NM_005785.3 RNF41 Homo sapiens ring finger protein 41 (RNF41), transcript variant 1, 0.0 2214 77.26 0.460364352535697 TCONS_00192082_3 sp|Q8BH75|RNF41_MOUSE RNF41_MOUSE E3 ubiquitin-protein ligase NRDP1; 1e-102 302 78.69 0.982954545454545 9 coding 1 1 1 1 0.0418316949986272 0.712464683636738 0.00966840386279144 0.845798568926498 TATCTCTCGGCCGCTGCGGGTACAGAGAGTCCAGACCGCTTCCAGGGCGGACCTGGGTTTCAGTGATGAGACATGGGGTATGATGTAACCCGTTTCCAGGGGGATGTTGACGAAGACCTTATCTGTCCTATTTGCAGTGGAGTCTTGGAGGAGCCAGTCCAGGCGCCTCACTGTGAGCATGCTTTCTGCAATGCCTGCATCACCCAGTGGTTCTCTCAGCAGCAGACGTGTCCGGTGGACCGGAGCGTTGTGACGGTCGCCCACCTGCGCCCAGTACCTCGGATCATGCGGAACATGCTGTCAAAGCTGCAGATTGCCTGCGACAACGCTGTGTTTGGCTGCAGTGCTATCGTCCGGCTTGACAACCTCATGTCTCACCTCAGTGACTGTGAGCACAACCCCAAACGGCCTGTGACCTGTGAACAGGGCTGCGGCCTGGAGATGCCCAAAGATGAGCTGCCAAACCACAACTGTATTAAGCACCTGCGCTCAGTGGACAGAAGCGAGACATTCAGCTGCTCAAGGCATACATGCGTGCAATTCGCAGTGTCAATCCCAACCTTCAGAACCTGGAAGAGACCATTGAGTACAATGAGATTCTAGAGTGGGTGAACTCCCTGCAGCCTGCACGAGTGACCCGCTGGGGCGGCATGATCTCCACCCCTGACGCTGTGCTCCAGGCTGTCATCAAGCGCTCCCTGGTGGAGAGTGGCTGTCCTGCCTCTATTGTCAATGAGCTGATCGAAAACGCCCACGAGCGGAGCTGGCCCCAGGGTCTGGCCACGTTAGAGACAAGACAGATGAACCGGCGTTACTATGAGAACTACGTGGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTTGTGATGGCCTGTGAGAACCAGCACATGGGTGACGACATGGTGCAGGAACCTGGGCTCGTCATGATCTTTGCGCATGGCGTGGAAGAGATATAGGAGATCTTGATGGGCTCTCTGGAAGAGATGAAGATCTGAAGATCCAGTTACTCCAGCAGCAGGGCCCCAAGTCCTCCCCACTTTTCTTAATACCGTGGCTTACCCTGGAGCCACACGTGTCCCAGCTGTGCCACCACTGAGGGGGACCACAGAGCACTCTGCTCAGCCTTTTAGGTGGGAAACCCAGATTCCCTCCTTTTGTCTAATTTTTTCCCCCAAGATGTCTGTAAATTTTCCACCTGATTGGGAAAGTCCCCATCTCTATTTCTGTTTTCCTGCCTAGGGTCCCTGGTTCCAGATATTTTCAGAAAGCACAAAGATACTCATTTTAGATAGAGGATCAGGATGGAGTGAGGAATCTCTAACTGTTCCCCTCCTCCAAAACCTGGGACTCCAGATGAGGCAGGTCTGTTGACTCTGAACAGCATTTAGAGGGCAGCTGTGGGGAGCAGACATCCTGAAGAAATGGTAGAGTGGAACAAAAGCCTAGAAATAAATAATGAGGCCAGTAGGCCATCGCTGGTGGCCCTTAAGGGAAGACTGGACCTCGGTGCCAAGCAATACCCACCAGGCCACTTAAAGGTGTGGGCTCCTGCCGGGCCTGCGGGTGTACAGTTGGGGATGCCGAATACTTTCAGATGAGCTCTCCTTTCCTACACTTTATCATGGCTAGGCAATGACAGGGTTGGGGGTGAGGGGTTAGTCTCCTGGGGTGAATGCTCAGCAAGAAGCAGGTTGCTGGCTTCTGCTGCAGTCGGGTGGGTGCTGCCTTTGTGGCACGGGCCATAATAGCCCCCTAGACCCCTCGCCAGCCCTGTGATTGTAACTAGTTATTTTGGTAACTTTCTTTCACTCTTTCCCTCCCACTTTTTTTTTTTTTTTTAAAGAAAGGCCTGATTATGGCTACCCCACTTTTCTAGCCCAGCCACGTTGTTGGCAATTTAATTTATTTACCTTTTTTTTTTTTTTAAGAAAGGAAAAAGAAAAAAAAAGTTAACAAAACAGAAAACTTTTCTTTTGCTGTTCCTGTTGTGGGGATTTTTGGATAGGGTGGGACAGGGCTGGGGTCTTTTATATTTTTCCTTTTCAGCACAACCTTTGGCTTTAATATAGGAAGGGCCATGGGAGCCCCTGGCTGAACTGAAGCCTACCCCAAGCCTCCATAACCCGTCTAGGATGAGGCGCTTCCTCTATTCCAGTGATGGATGTGACCGTCCAGCATCACTGACTATGCCCTAGAGAACTGTGCTCCCAGCCTCACCAGGGTCTCATGGTAAAACTCTGGATTTAATTTTGAAGAAATCCTACCCGCCACCAGCCCTACCCTAACACCCAGTTTCCTTGGAGATATATAGCTGGGTTCTAAGCTTCACCAGGCAAGACGGGATGGAAATCCTGTCACTGAGTACAGGCTGTGTTGTCTCACCCATACCCGCCATGGGCTTCAGCTCCATTTCAAGCTGCCCAGGGCATTCCTTCATCCCTGGGGTGGCCAGCAGAGTAAGAGAAGGGGAGGGGTAGTGGGTGTGATTATCTTAATATGCAGGTGAGAGAGGGGCTAGAGGAAGATGGCCATAGGACAGCTTGGAGTTTTATCCCAGGCCAGCTTGCTGTGGGTCTGGTAGTTGGGTCATGGCTCCACTGGGACTGTGGGGAGGAGAGGGACACAGCTTGAAGGCGGTGAGGAACAGTCATATGTTCCAGCTCCGGGACGTTGTGCTCAGGAATTTGAAAACGCTGCTATACTTAGTCTGGTTACTACATTTCTTCCACTCCCCTCTGCCCCTGCCTGCCTTACCCAGGCCCACACCCTCCTGTTATCACCTTCAGATGGAGCCAGGAAGCTCAGTCAAGGCTTCCCTACCCTTTGCACTAGTGTCTCTGCAGGTCGCTGGTTGTGTTATACATGTGCTGTTTCATGGTATTGACTGCACTAATAATAAATCTTTTACTCAGCTCTCTCAATTCTTAATTCATATCACTCCCCTCCTGGAGGTTCTCCTCTGCTTTGGCCTTTCTCTACCTTAATTCCCTGACTTCTTCCTTGCTCTGTAACCAACTCTTGTCTTTGGGCTGACCTCTGTTTTAGGAGGTCTGTGTGGAAGGAGTGTACCCTCCTACGCCCTTCCCTCCTGTCTCCTGTTCTGTAGAGCTGAAGCGCTCTTGCTAGTGATCTGGACTGTGTTATTTTCAGAGTTTTCCTTTGCTGCAAATCCATGTCTTCCCAAGGTGCTCTGGGATTTGGGGACACTTTCTGTAGACCATATGCAAATACCTTTCCCCTTGTCCCACAAACACCTTTGCTTTGGAATCTGGGATTCCATGGCAGGCAGAGAAACCTCCACCTAACCAAAAAAGTAAACATGAGGAAAGGAACCTGGAACGACTGCCTGCTGTGATTGTCAAACCCGATAAACCCTTCTGTAGGCGTTTACTGCCACTTTCCCTATCATGAGAAAAAAAATCTTTTACCACAGTACTGTATTTTAAATTTGTTGAGCATTTACTGTGCACCTAATATAAATCTAATAGTACTCTAGACACTTTAGAGGGGCAAAAAAAAGCATAAGAACACTCCTGTGCACATGGAATCTACTACACTTTCATATACACAAGATCTGATTAGAAGATGCTGATAAACACATCATGGTATAGACCAAGAGTGGCAACATATATGCTCTAGTGACAGCAGTGCTTTTTTTAAGTTTCTTTAAAATAATGTTTGGAGAAGGCAATGGCACCCGAAAATTATGTTTAGAACCTGCTGCTCATTCTTTTGAATGTTATGAATGATGCCAAATCTTTTAGGGTAGGCCTGGTTTTTGGAAACAATACTCACTGAATGTCTATTTTGCAAGAACTCAACTAGGGTGGGGCTGGGGCTGGTGGTTCATATAGCAAAATGGCACCTACCTTCACAGAAGTTACTCCCCGATGGAGATAAATGTTCAATCAGTTCAGTTCAGTTGCTCAGTCATGTCCAACTCTGCAACCCCATGGACTGCAGCATGCCAGGCTTCCCCATCCATCACCAACTCCTGGAGCTTGTTCAAATTCATGTCCATCGAGTTGGTGGTGCCATCCAACCATCTCATCTTCTGTCGTCCTCTACTCCTCCTGCCTTCAATCTTTCCCAGCATCAGAGTATATAATAAGACATCATAAATGTGGGAAGTGGATCTTGCCACAAGCAGTATGTGAGCAGAGTGAAGATAAAGCCCTGGGTTCCAGGAAAGACTTTTCCGGGAGACATGGTATCTTGTTCTACATCAGAGGTTAGGACGTGGTATATTGTTCTAGATCAGAGGTTGGCAAACTACAACTTGTATCTTGCTGCCTGATTTTGGAAAAAAAAGTTGTACTGGAACACAGCCATGCCCATTTGTATTTATGTATATTGTCTCTGGCTGCTTTCAGATTACAGCAGTAGAGCTGAGTACCTGCCATAGAACTATGGCAAAACCTAAAATGTGTGCTACTTTGTCCTTTATAGAAAATGTGCCAACCTATTTTAAGGTCAGGAGAACGGGCAGGGAAGTAAAGAGCGTTGCTTGTTTTAATTTTTTGTTTTTGTTTTGTTTTTTTTTAGTATATGCCTTTGAAAAATCAGAATTTTTCTGCATTGTCAAAATAACAAATGCTTAAAATTAACAATGTATCCTTAATCTAATACAAACTTATATTCGCAGTTCCCCAATTGTCCTAAGAAAAATACTTTTAGAGCTGATTACTCTCCAACCTGGATCCAATCCAGGAACCATGTGGTTATACCAGGTTATGTGTTTTAACTCTGTCTGGATTCCTTAAACAACCTCTTTTTGGTAACATTAATTTGTTGAAGAGAATAGGGTCAGTTGTCCAGAGAGTGGTCTTTTGAATTTGACTCCTTCTTGACAATGTCCTTTAACTTATTCTTCAAACCGCTATTTTTCCTAAACAAGATTAGATCTAGAGTCAGAGAGATTCTTTTTTTTTTTTTTTTGTCATGCCATGTGGCTTGTGGGATCTTAGTTCCCCAACCTGAGATTGAACCCAGGCCCTCAGCTGTGAAAGTGTGGAGTCAGAGCCCTACCAGGGAATTCCCTGGAGTCAGACAGAGGGAAGTTAACCAGTTCTGGGAATAAAAGACATCTCAGGGGAGATGTTCTTTATGTTGTGTAACATTAGAACATAGGCCCAGTTGTCCCACTATTACCCTGATCTCTTCACTGTACACTTTCATCATTGAGAGGTTTTTGAAGCTGGCTAGGTGACAAATATGTGCCCTGAGAGAAGGGGCAGCTGGCAGTACAGATCTGATTGGTTACTGCTATACAAGAATAGAGACCCAACACTGCTCCTGACTTTTTTCAAAAACTTGTGGACATCCTAATGTTTATGCTAAATATCACAACTTTTAAATGTTGGCTCAATTTTTAAAATGTGGGCCAAAAAAAACATGGTTCACCAGTTTTCAACCTCTGTTTTAGGCTGAAATAATAGCATGAATAAAAACAATTGGAAGTGAAGGATATATTGAAGAAGGAGGAACGTGATCTGAAGCATAGAGTTTGTTGAAAGAAGTAATGGAAGACTAAAAATAATTTGGGGCTGATTCCTGGAAAGCATTGATATGGCAGGGAATTTGGACATTAGTTTTACAGATAAGTTCTTGAGAAGAGACGTGACTTGTAATTCATGGTTCTAGTGATGATAGAAAAACAATGAAAATTGGATGATAACATTAGTAAGCTTTGCACTAATTCACATGAGAGGATTAGAGCTTGAAATGACCAGGAAAGAGGACAGAGGAGGGGAGAAAAATCAACAGGTTAACTGACCTTGGTAACTGACTGGATTCACTCAGCCAAAATTTATAGCATAAGTATCAAGTGCTAGACTGGGTTCTGGGCATTTGAGATATACAAATAATTGTATATTCCTTGAAAGGAATTTGAAGCTTGGGTGACATACACTTGAACAAATAATGGGAAATACAGAATAGCATACTGCTAATATGTATGTTTAATGCAGTGGGACAATGAGGAGGAAAGGGGTCAACTCCCTACCCTACCCTGGTGGGATGCAGGAGGGAAGTCTTTCCAGGAATCACTAGAGCTGAGTTCCAAATAGGATCAGATATTGGCAGTGAGGAAAG EMBV3_23854 TTCCATCCTGCCGCTCATCCTATTGGTATTTGGTCTTGGCCAGGTCATTCCAGCTATCAC Gene BVV0102_079997 + 0 NULL GK000009.2:89564992-89575311 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236241 TCONS_00236243 TCONS_00236244 TCONS_00236242 1 XLOC_144415 Coding TCONS_00236243 XLOC_144415 Coding Coding AKAP12 9:89552397-89567141 = TSS176887 8024 1 TCONS_00236243_9 1631 3 0.455945194329512 0.00162011159360522 0.000903827122917409 0.00164825774148258 0.000948423709292377 0.00106677263117958 0.000253332010803799 0.000680940130011327 0.000872083027114766 0.000653261666294345 0.000237917344376755 7.06177947420392e-05 3.58315712287015e-13 0.000275331335156803 0.000402485927176511 0.000468563784411095 0.0280449998838542 0.011401462519433 0.0239855544210121 0.00130932929537984 0.00107678280663817 0.000301074682989848 0.0123789638697532 0.00920870671451253 0.0143398490478978 0.00215281638610354 0.00121093912894309 0.00120431834495103 0.00407823554017969 0.00206956224262819 0.0053900465630454 XM_005211059.1 AKAP12 PREDICTED: Bos taurus A kinase (PRKA) anchor protein 12 (AKAP12), 0.0 1.401e+04 99.97 0.968843469591226 XM_005267233.1 AKAP12 PREDICTED: Homo sapiens A kinase (PRKA) anchor protein 12 (AKAP12), 0.0 3698 72.86 0.785767696909272 TCONS_00236243_9 sp|Q02952|AKA12_HUMAN AKA12_HUMAN A-kinase anchor protein 12; 0.0 1643 62.86 0.999386879215205 1 coding 0 0 0 0 -0.0046589868136967 0.975305849997866 0.0105465078876519 0.864183299011409 GCTGGCGAGGAGGCTGCGCCCTCTGTGACGCGCGAGGTGGCCCCCAGGGGGCGCCCTCGTCAGCGGCGGGGCCTGGGGTCGGCCGCCAGTCTCCATCCAGCGATGGGGCAGCCGGGGGCAGACGGCTGGGCCTCCGGGGCCTCTGTCGGCCTGCCCCTGCCTGCCAGCGGCGCGCGCCATGCCCTGGTGGAACAGCCTCTGCTGTGAGTAGCGCGCGCCCCGCGCCCCCAGTGGCGGTTCGCCCGGCGTCCAGCGGGCGGGATCACGTGGAGCGCCCTGCGACGGGACGGTTAGAGGGGTTTGGACAAAGAGAGTCTGAAGATGTGAGTGAAAGGGACTCAGACAAAGAGATGGCTGCTAACTCAGCGGTGGTTCAAGACATCACGAAGGAGGGAAAGGAGGAAATGCCTGAGATGATGGAACCAATCCCTGCCTCGGAAAGCAGCGTGGATGAGCTGATGCAACCCCCTGAGCCCCAGGCTAACGACGTGGGATTTAAGAAGGTGTTCAAGTTTGTTGGCTTCAAATTCACCGTGAAAAAGGATAAAACCGAGAAATCTGACAGCGTGCAGCTCCTCACCGTCAAGAAGGATGAAAGTGAAGGGGCAGGAGAGTCCGACGGGGCTGGTGACCACCCGGAGCCCAGCCGTGAGACGGGGGACGCAACACCCAAAGACGGTGAACTGAAACAGTCCACCGAGAAACCCGAAGAGGCGCCCCAACGTGAGCCGAGCTGCGCGGAAATCTCCCTTCAGACCGAGTCTGGTCAAGCAGCTGAGGAAGGCAAAGATGAAGGAGAAGAGAAACAAGAGAAAGAAACCGCCAGACCTGCAGACTCCCCGACTAGTCCCGTGGCCAGCGAAACCGCCTCGCCCTTCAGAAAATTCTTCACTCAAGGCTGGGCCGGCTGGCGCAAAAAGACCAGCTTCAGGAAGCCTCGGGAGGAGGAGCTGGAGGCTTCAGAGAAGAAAAAGGAACAGGAGCCAGAAAAAGCCGAAGAAAATGAGAAGATGGAAGAGCCCTGCGAGCAGCCACCTGCCCAGGAGGCTCCTGAGAGCACCCAGGATGCCAGGCTGTCGGCCGAGTATGAAAAAGTGGAGCTGCCCCCTGAAGACCAAGTGCAGGCACCTCCCGAAGAGAAACCAGCCCCGTTAGCAACCGAAGTGTTTGATGAAAAGGTCGAGATTGTCGCCGAAGTCCACGTTAGCACTGTAGAGAAGGACCAGGAAGAGCCGAAAGCCGAAGCGGAAGAAACAGTGGAGCTCTCGCCGCCCGAAAAGTCGACCGAGACGAGCGCCGACCTTCAGGAAGCCGAGTCGGCCGAGATGCTGAAGACAGAGGAAGATGCGGGTGCCCTGAGCGGGGACCACTCCCAGGCAACCGAGCTCAGCGGGGACGCGAAATCGCCGTCCACGCCCCCCGAGGGCACCGTGAGGGAGGCCGAAATGCTGTCCTCGCAGGAGAGAATTAAGGTGCAGGGAAGCCCTTTGAAGAAACTATTCACGAGCACCGGCTTGAAAAAGCTCTCTGGAAAGAAACAGAAAGGGAAACGAGGCGGCGACGAGGAGTCCGGGGAGCAGCCCTCAGCCTCCATGGATTCTCCCGACAGTCCAGACGAACTGAAGGGCGTTGAGAGCTCAGCCTCGTCTCCAGAAGAGCCCGAGGAGATCACCTGCCTGGAGAAAGGGGTGGCGGAGGCCCCGGGACAGGATGGGGAGGCGGAGGAAGGGACCACTTCCGACGGGGAGAAGAAGAGGGAAGGTGGTGTCACTCCCTGGGCATCTTTCAAAAAGATGGTGACGCCCAAGAAACGCGTGCGAAGGCTCTCTGAAAGCGATAAGGAGGACGAGGCAGACAAAGTCAAAAGCGCCACCCTGTCCTCCACAGAGAGCGCGGCCTCCGAAGTACAGGAAGAGGCCAAAGGGAACGGAGAGGAGCCGAAGCCCGAGGAGCCCAAGCGCAAGGTCGACACCTCCGTGTCCTGGGAAGCGCTGATTTGCGTGGGGTCATCCAAGAAGAGAGCCAGAAAAGCATCCTCTTCCGACGATGAAGCAGGGCCGAAACCTCTTGGAGGGGACAGCCAGAAAGCAGAGGAAGCTGGGAGGGACAAGGAGCCGGGCCCGGAGGCAGCCGCTGCCGGTTCCCAGGACCACGAGCAACCGCCGGGAAGCTCCTCACCCGAGCCGGCTGGCAGCCCATCCGAAGGGGAGGGCGTCTCCACCTGGGAAACCTTTAAAAGACTGGTCACCTCGAGAAAAAAATCGAAGTCAAAACTGGAAGAGAGAAGCGAAGACTCTGTAGCTGGGTCTGGCGCAGAACACGCAGCCTCAGAGGCTGAGCCTGGGAAAGAAGAGTCCTGGGTTTCCATCCGGAAGTTTATTCCTGGGCGAAGGAAGAAAAGGTCAGATGGGAAGCAGGAGCCAGCCGCTGTCGAAGAGGCGGGGCCAGCGGAGGCTAACGAGGACGATGCGGACATCCCAGCCGTGGTCCCTCTGTCTGAATACGACGCAGTGGAAAGAGAGAAAACCGAAGCCCAGCCAGCCCCCAAGAGCCAGGAGGGGCCCGAGCAGAAGCAGGTGGATGTCGACGTGTCGGAGGAGCTCAGTAAGAGCCTGGTTCACACCGTGTCGGTGGCTGTCGTGGATGGGACAAGGGCCATTACCAACATCGAAGAAAGGGCACCCTCCTGGATCTCAGCTTCGGTGACAGAACCGCTGGAACAAGCCGAAGGTGAAGCCACACCACCAAGCGAGGAGGTGCTTGAAAGAGAAGTCGTTGCGGAGGAAACCCCCATCGTTACCAAAGCGCTGCCAGAGAGCCAGGAGGTGGGTGATGACACGATGGCCAGCGAGGTGGAATTAACCTCAGAAGCTGTGACAGCCGCTGAAACCACAGAGGCCTCTGGTGCGGAAGAGACCACCGACATGGTTTCGGCTGTCTCTCAGTTAACCGACTCTCCAGACACCACCGAGGAACCGACACCAGTGCAAGAGGTGGAGGGAGGCGTGCCTGACGCGGAGGACCAGGCGAGAAGGACCCGAGAGGTGCTGCAGGCTGTTGCAGAAAAAGTTAGAGAAGAGTCACAGCTGCCAGATGACGCCATCCAGACAACCCAGAAAGGACAAGCAAAAATACTGGAGAAAGTGGAAGAGGCCGAGGAGGGATCTCAGGCCCTAGATCTGAAGGAAGTGATGGATGGAGTATCCAAAGTGCTTGTCCAAGATACTGAAACTGAGACTTTGACACAGGAGAAGGTGGTTGCAGAGGCCACCGCAGAAAGCTTGGGAGAAGTTCCTCCAGGCACAGACAGTGCAGAGGCCAGGGAGCTGGCGAGCACTTGTCTTATTGAAACCGGGACTGGGGTAGAAGCAGAGACTGCCCCAGAGCAGGCTGTTGCTCCTGACTCAACTGAAACCCTCACGGACAGTGAGACCAATGGAAGCACCCCAGTAGCAGATCTTGACGCTTCAAATCTAAGCCAGCCAGACACGATCATGGATGTCCATGAAGATGGTGAGGTTCCAGCCGGCACTCAGTCCCAGGTCCCCGAAGGCGAGGTGCCTCCTGCAGTGAAAGAGCTGCCTGCAGCATCTTCTGATTTTCAGTTGCAGGAGGAAAGGTCTTCAAAGATGGCAGAGGGTCTAGAACACACGGATGAAGAGGAGGGAACAGTGGAGACTGTAGCCATCCTTTCAAAGACTGAGATGATTCAAGAGACTGGCCAGTGCTTTGATGAGGAAGCCAAAGAAGAACCATCCATGGAAGGACTTGCCTTGTCTGCCGACACAGAAATAACTGAGAAAAAGATAACTGAAGTTGTCCTTGAGGAGGACGTTACTAAGAAAGTTGAATTTCAAGAGAATAATATAGAACTCCAGAGTCCTGCTAAGTCTCTTCCAACCCCAGCAGAGAGAGAGATGGTAGTTGAAGGGAAAAGGGAAACAGTGGAAGTGGAGGCAACTGAAGGGAATGAAGAGAAACTTGAGCACGAACCAGCTGTGGCCGTATGTGAAGAGCTCAGTAAGCAACTGGTTCAGACAGTGAATGTCACCATCATCGATGGGGAAAAGGAAGTCGTCAGTTTTGAAGGAAGTTCTCCCCTGCTGGCTTCCGAGGAAGAGGCATGCACGGGAATCTCAGTTCAAAGCTCTGAGGCAGCATTAGCTCTAATAGCTGCAGCCGTGGAGGAGAAGGTCTTAGGAGAAGCTATCAAGATTGTAGAAACAACCGAGGCTTTGAAATCTGCAGAAGCTCATCTAGTACTGGAAGAAGAGTCCTCAGAAAAAGACGAAGAGTTTCCTGCCCAGCCTGGGGAAGAAGATGTGGCATCCACAGGGACTGAGTCTCAAGCAGAATCAATACCGACGATAGTATCTATTACGCCTGGAAAAGGCATCGACGCTGACCTGGAAGGAGATGAAACCACATCACAGAAACAGGAGTTGGGTGGAGACGGTGAGCAGGTTGGTGGTCAGGAAGGCAGAGAGAGCAACACAGGAGAGGAAGACGGCAAGGCGGAAAGTGAGATTTCGAAACTTGAGAAGGAGAGCTGCAGACTTGTAGAGAGCGTGATTCAGACAGCCGTCGACCGTTTGGGGAGTACAGAAGAAACGGCCACCGATGTCCAGACCCAGGCTCAACTGGCAGAAGCCGACAGCCAGGAAGCTGGGCAGAAAATGGAGAAAGAAGAAAGCAAACCTCAGGCCTGCCTGGTGGATGAAACACAAGCCGTAGAAGCCAAAGAGGCCAAAGAAGCCAAAGAGGAGTCCCCACTAAGCACCGGCGAACATGCGCATCTCAGTGTTTCCAAAGATGCGAATGAAGCTTCAGAGAAGGTGGCAGCCACTAGCATAGAAGGTTCCAGGGTAGACGACCAGCGGCTTGAAGAGGTAGCTCTCCCATCCCAGAAAAAGAGAGAAATCCTTGAAACAGAGTCTGTGCTGCAAGATGACGGCAGTGCCGGGTTTGGAGAAAGAAAGAAGTCCCCATCTGAATCCCGAGAGGATGAAAAAGGTGATGCTGCCGGTGACCCTGGAAACCAAACCTCAATCCCAGAGGATGCTGAGGCCTCGGGAGGCTCAACCAAAGAGTCCCTAGATACAAATGGACCCAAACTGAAAGAGAAGGGAGACAGCCAGGAGGAAAAGGTGCAGAGCGAGTCGGAAAAAGAGATGAAAACACAAACACAGGAGGAGACACAGAACCAAGAGAGAGATCTGGCAAAACCCGAACCCACGGAATCCTAAAACATCACTTACACTTGTGTACTTGCAAGACCAGAATGTGAAGACAAGTAGGGGAAGAAATTGAATGCTGCTGATGAGACCAGTCTTTCAGAACTTTGGAAACCGAAGAACAGACGTGTCAACTGCTCATTTCCCGAGAACCCCTGACAATCCTGAGGCTTCATCGGGAGCTATAGCCAGATAACATTTCCTCTCGTCAAGACCACACTGACATTTTCCCTCAGTACCATATAATGTTTCTGATTCAAGGTCCTCAATTCTTAGCCCGGAACTGGAGTTGGCAATTCTTGGGTCTGCTTCTCAAACTGGAGTATCATTCTTTATGTATTTATATGTATGTTTCAAGTAACCCTCCTTCTGTATCTATTGTATATTTTTTTTTTTTCTTAACGTCTAAGGAAATGTACAGCGTAGTGCAATTCTTTTGTATCACACATTATATGACGGGGCATGCGGCCACAGTGAAGTCTCGGGAAGCTTTCTGCTGCCTCAGTTACAGCCTTTGAAAACAGCTCTCTAGAAATAACATTCCTGATCAGAAGCTCCATCTCTTTTAAAATTCACTAAGGATTAGGTTACATGTTCAGTATCACTCTGAAATAGGTCCCTTTCCTATTATGCATAGTATGCTAAAAATAAAAGTGTTTTTTTTTTTTTTTTTTTTGCGAGGGTTGTTGGGGAGACATACAGAATGTCCCATTGTTGCTGGGAAATTTTTCTTCCTAGCCCCCGGGTGGAGGTTGGAAGGAAGTTTTTTTCAGGAGCAGATTAAGTTGGAGTCTTTTCTCCTAATTGTTACGGTTGTTTGGACGGATGCGTGTGCTTTCATTTTGAGGCAAAGTAGTGAAATGTTTTCACAGTATCAAGAAAAGAATTGACTGCTTTTGAGTCAACCTTACATGCTGGATCCCCATTCACACACAGCACGAAATAAGTCAGAGTCTTTACAAATGGTATTTTGATAGATGCTGGATTGTTATCTGTGCCATATTTGTGCCCACTCTTTTAAGAACAATGTAGCATTATGTTCATTTGGATAAATTGTGATTTGACAACCGATTTCAATAAAACATTTGCTTCACTTAGATTTGCTGGATTTCTTAGATAATAGGAAGGCTGGGTCTTATGTTTACTGCATCCGAAAAGCAGAGAAGCTAGAACTTTCTAATATAGTCACTACACAGGGTCACTGGCGGAAGTCAAGGGCAGAGAGGCTTCCACTGAAATAAACCAGGAGCTTTTCAGATTGAAGGTACTGAAACAATGCTACCATCTGGTGGTGCTTCCTGAAAAGGTTAGTTTTCTTTGTTAATACGTGTTAATGACAAATGTCTCTAGAAAGACATTTTAGGAAGGCTTAGCAGTAAGAATTTTAGGAAGGCTTAGCAGTAAGAATGCCTTGCCTAACCGGTGATCTTGGAAAAAATTCTTAAAGTATCAAAATGATTTCTAGTTCATGCTAATATACAAAAGATTCTGTCAGCCAATTGCTACACACACAGAACCATCCCCTATCTACTGGAGAGTTTCTACTTTTTCATGGGTAGAGAACCAGTCTGGTGTATACACTTCTTAAATTTTACGTAAACTCAGTACTCCAGTTTGAGAACTGAAATTTCAACTGCTGATTAAATTATTTTAAAGCATAACACTCAAGCAAAACTAGAATAGTCCTTTTTTTTTTTTTATTTTTTAGCTGAAAGTTGGCTGTTAAAAGCTGGAAAGTAATTTCTCATAAACCAACAAATCTGATTACAATAAAAAAAAAATATTGGCCATATTAGAAACACCCCTCATGCTAACAGCATATGGCTGTGCAGTTGGAGAACATTTAATATCCTTTTAGGAGTTATTTGCACATTTAATAGCTACTTATGCTTAATTATTAAACTTTAAAATCTCCAAATTAAAAATACCCTCTGATCTGAAGATCTTTCTTTTGCCAGCTTGAGACTTAAAAAAAAAACCTAAACGCTGGTGTCAATTTCTGAAGATCAACTGAAATTTGGAGATGACAGCAGTTTTTAAGGAGTTCATTAGACTTCTAATTATTGACTGACTTCCTTTCTATGTCAGGAAGAAGGTTTGTGCTGTTTTGAACAGATTAAAGATTTGTGTAGTTTCTGGTGATCATTTTGGGGGGTTTAAATTCCATCCTGCCGCTCATCCTATTGGTATTTGGTCTTGGCCAGGTCATTCCAGCCATCACAGTTGGTTTTTCAGTGGCAGTTGCTTGGTGACTGTGCTCTTTTGATGTGCCCTGGGTTACTCCCGTTCAGGTTCTGTACTTGTGTCCGTTAAGCATCATTGTTTTATTAACAGGAGGAATGCTATTAACAGTAGCATGACATACAATTCTGTATTATAATTTTAAAGCTGCTGTTGTGAAGTCCTTAAGCATCAAATGCAAACTGCAGAAGTTGGAGCAAGTGCCTAAACTTTGCTAATTTTTGCATTACTATGGAGCCATGTACAATAGAAAGGAATGCAAGACTTGTACACTCTTGCTGTTTCTTATACTTGAGGAATATAAAATGTTCCCCCTCAGGTTCTTTTGCTAATGGTACACCCGAGTTGCCTCTCTCTGCCACACAGATAACTTTGTTCCGATATTTCCTTTGAGATATTGAAGGGCTGGAAATTTTAGCTTTCAGTGTAAGCTTCAAGCTTAGCGGTTTTCCTTTAATCTGAGACAATATTTGATTCTTACTTCTGTTTGGGGGGGATGCAGATTTTTCATTTATCTAAATAAAATGCAACCTAATTAAATACCATGGA EMBV3_37810 GAGCATCTACTATGCGCCAAGCATTGAGCTGGGGCACTATGGTTTACAAGGTAGACTCTC Gene BVT0102_287267 + 0 NULL GK000014.2:48094755-48318417 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053466 TCONS_00051864 TCONS_00051867 TCONS_00053467 TCONS_00051866 TCONS_00051862 TCONS_00051861 TCONS_00051868 2 XLOC_031736 XLOC_031313 Coding TCONS_00051864 XLOC_031313 Coding Coding SAMD12 14:47779585-48227732 = TSS38592 8451 1 TCONS_00051864_2 161 0.0418885339013135 5 0.981153463380238 0.000598607760306175 0.00097984521399671 0.00135437927650321 0.000382415317646936 0.00103243537029038 0.000917034489685831 0.00032085044741784 0.00112756264243262 0.000247579554004855 0.00018097128529346 2.44873144641493e-08 6.05020491629653e-10 8.04378448257545e-08 0.000205091821330049 0.000386158645685819 7.27641705955335e-06 2.33991773943438e-09 1.34429269768704e-10 0.000631378379074584 0.00119986594161034 1.57520181941176e-09 6.88684209526924e-05 5.38295836307592e-07 7.15477038021741e-12 0.000530442468886812 0.00195337298575996 0.00134032343416709 2.71392216441962e-06 1.30415783738922e-09 5.79992590772018e-08 XM_005215543.1 SAMD12 PREDICTED: Bos taurus sterile alpha motif domain containing 12 (SAMD12), transcript variant X8, mRNA. 0.0 5647 98.45 0.376641817536386 NM_001101676.1 SAMD12 Homo sapiens sterile alpha motif domain containing 12 (SAMD12), 0.0 3698 75.90 0.621346586202816 TCONS_00051864_2 sp|Q0VE29|SAM12_MOUSE SAM12_MOUSE Sterile alpha motif domain-containing protein 12; 9e-106 304 92.55 0.993788819875776 3 coding 0 0 0 0 0.141226530722571 0.410994703276409 0.00443042928287458 0.937292344315694 GCCTCGCTTTGCGTGACCGCGGCAGGTTGGTCCTGGAGCAGATGAGCGCAGAATATTTAGGCGAAAACGCGAGGAGGGGGTGGGATCGCGGGGCAGGAGGAGTATCTCCGCCAAGAAAATTATGCATGCGTTAGGGAAGCTCTGAGAGAATGGCTGTGGAAGCTCTCCACTGCGGTTTGAATCCACGGGGTATTGATCACCCTGCCCATGGTGAAGGTATTAAACTACAAATTGAAGGTGAAGGTGTTGAGTCTCAATCCATTAAAAATAAAACTTTCCAGAAGGTGCTTGACCAAAAAGGAACCCCCAAGCGACTGCAGACAGAAGCCGAGACAACTAAGTCGGCTACAGTGAAGCTGTCAAAACCAGTGGCCCTGTGGACCCAGCAGGATGTCTGCAAGTGGCTGAAGAAACATTGTCCGAATCAGTATCAGATCTACAGTGAGTCATTCAAACAGCACGATATAACTGGGCGAGCCCTGCTGAGACTTACAGACAAAAAGCTTGAGCGAATGGGGATCGCCCAGGAGAACCTCCGGCAGCTCATCTTGCAACAGGTGCTCCAGCTGAAGGTGCGAGAAGAAGTCAGAAACCTGCAGTTACTCACGCAAGCCTCAGCCGAGGGTTCTCCATAAATGCAGTTAGCCTTCCAAGCTGCTGTCCTGCCAGTCAATACGAACATGGCCTGTTCCTCACAGAAAGACTAACTCATGGCACTGCCAGAAGATATCCTTGGAGCATTGACAGATTAACCAGATTAACTGAAAAACCACCCATTCAGTCAAGATTACGGGCTGTGGAAAATCTTAGTTTGCTCTGGATTTTTAAATGAGGTGCATAATATATAGTGCCAACTTGTTCCAAGTGGTCATTGGCAGACCATTAGCTGGAAAATTGCTTCCAGTTTTCATCACTGTGCATAACTGAGGCTCCCTTTGGGGAGCTGTCTGTGCCCTTCACTACAGGTCCTGTTTTAGCATGACAACTACTGGATTATTTTATTATGTGTGCAGATGGCATGATGTGTTAGAAAAAAAAAAATTCCAGCAGTCCTGCAATCTCAGTGGAAGTGTTCACAATATTATGCCCTGGTAGGAATATAAACATGTCTCGATTGTGTTAGTTATGGTGTCTAAAGGTAGTCTGTCCAACTCTTCAGCACTTTACATGGTAACCCTACACCGAAACACATAAGCACGTTCAGTACATGTGAGAAGACAAGTCTTTTCTTCTTTCTTATAAATTTTGTCCTATTTTGGCTCAGACTGTCCAAGGCAAGACTCCACTCCCAGCATATACCCCATAGTTTGGGACAGATTGGTAAACATGGCCACAATACTGTTAGACTTAATCTCTTGACACTTTACTGGATTTCTTACAGCACCAAAGGGAGATAAAGGTGGGCCTGGGGAATGGTGGTTGTTTCCTCTTGTTTCCTCTTCTTGGGCACAACTTACGACAAGCACATCCATACACTCAAACACAGGAGGCTTCTTTCTAATTGGCCAGTGTACATAGTCTCTCTTTCTATAGAAGAGTTCTTTCACCAAAAATGGGGGGAATGGCCATATTTTCATCCTAGGCTATGGTGCGTTAATAGTAAGGACAGCAGAATAAAGGGGTGTGACTTTAACACTTTGGAAAACTCTTCAGGTCAAGTGTTGAACTCAGTTCTCTGAAGAGGAAAAAATAGTGTGACCCCCTGCATGTCTAGAGAAGCAAGAGTTTCCAGCCACACACTAGGTTTCTTCCTCAGAAGAGAACCTACTAGTCCTTTTTAATCCTATCTGGAATTATACCCGTAACTAATATTTTTTACTATGTTTTACAACAAAGCACAGTCCTGGGGTGCCAGTCAGCCCAGTTATTGCTTGTCTTTAGGAGTTAGAGGAATGTTCATGTTGACTGACCCTATATCATGCTTTAGGCACTTTTTCCCCCTGAAAATGTAAAGTTGACTGAATCAGAAACTCAGCCAAGTATGTTCTGTGTGCCTGTAATCCCAGTCTGTGGATCGCAGGGATAGGAGACTTTTCTTTAAATACATGTAACAACCCTGGGACCCAGCCAGCACAAGCAAGCTTGGCATTTCAGAGGGTCACCAGACACACACTCATTGTCTGTTCTCCCCACATCTTTCCACCCCTGGGGGTATCAGGAAATGCACAGCCCATTAGAAAACATCCCTGCCTGCGATTTGGAAGCTTGACAGGGAAGGAGGGAGATCCAAAGGTGATCCAGGTGAGTCACCGGGCCAGATGACTCACCGCGAGCCTGCAGGCTGTGGTGCCAAAGAAGGGGGCTTCCAAGCGGGAACTCACAGGAGCTTCAGTCACCACCGAGATCTGGCCCTTTGGTGGGTCAACATCAGGACCAACACTGTAATTCTTTACAGATCCAAAATTAAGAGGCCAAAGCCTAGCCGCCAATGCCCCTGGACACCTCAGTCTCCACCACCCAACTCCTGAGGTTCAATTCCAACAGCAGAGTTCACACCAGTCTTTTGTTTCTTCCTTTCTTTAGAAATCAAGTGTTTATTGAGCATCTACTATGCGCCAAGCATTGAGCTGGGGCACTATGGTTTACAAGGTAGACTCTCCCTGCCCTTATGTCTCCTCCTCCCAAACACTATCCCAACCCCACCTTTTCCACAGTGAAAACTGAATTCAGACAGCATTCGCCCCTCCGGAGCAATGTGGGGGAGACGGTCACGCACAGCTCCCGTGACTGAGGAAGCAGGCGGCAGAGGGGAAGTAATGGACAGCATCAGGCCACGTATTTGCACCCGTCATGTACAGCCAACCCTTCCGGCACCCAGATTTAGCTGATGAGAGCTTCCCAAAGCAAGTTTCAGTTGCTTCTCTTGATATCCACCCTGGTCACCTATATTCCCATCCTTTATACAGGAACAGCCATTCATCATTGTACTGGCATCTCAGAAAGCCCAGTTCTATAACTAGTCCTGGAGACACAGAATTGGGCCTGAGGAACTCGACAGAACTACTGCCAGGTGCTGAGATACTGTAGCTGGGAATGCACTAGTTTAGCCGGGAACATTAATGATTGTTAACACCCTTGGAAAACCGAGCATGCTTTATGGTGCAGATAGATATTCATTAAATGATGGTGATTCATCCTAACTTTGGCTTTTGCAAAATATGTTATGAACAAGTAAATAAGTAGAGTTGTCTAGCCCTTTTCTTTTGAGTCAAAGTGTACTGGACAGTTATTTAAAGATAGTGGGTAAAGGTGGAAATAAGAGAGGGCAAAGATGGAGACAATGAAAGAGCCCCATTGAAGATGGTTTCTCTAAAAATGCCTTAATTCCTGGCACGTACCACATATTTGCATATGAACTACTACTGTTTTCCAAACTGTCAGCCTCTGTTTGAAATCATTTGAGGGCATGGTTTTGGAAACGTGGTGGCTTAAAACCAGAACAGTCATGACCTAAACCAGCAAAACTGGAGAAACGATTTCCTTCTCAGCCTTGGGATTCTTTGTTCTGTGCTGACCCACAGTTACCCATGGCTACTTCCTGCTGTGTTGTACCTTCTTCCCAAGATGCGTGTAGGACATTTTACCTCCCAGAGATGGCTCTGTTGAGTTTTGTTTAGGAGGAGGCAGGAAATGAGGAGGGAGAATATAAAGGCTTTGATGTCTCAGGGCTGTAAACTGTTGATGCATTAACTTTTCCTCTTACTTGAACTTGTGCTGCACCTTTTATTAAAAGTCTGGCCCCTACACTCACACAGGAAAGGCACTCTTGGGAATGAACAGAACGAATACTTATCAGACTCTCGGGTGCCAAGGAGGATAAGCTCAGTTCGGGCTCCAGATCGGAATTTAAATATGCAGAGTATCGGTGGTTCTGCTAGGGTGAAAAACACATCACCCGAGTAGTTTAAGATGCACCTGGGGGACAGAGACACTATCAGCTTTCTTGTGGGTAATGGCACGTCTTTGATTCCCTGCTTAGGCTCTGTGAGGTGTGTAACTGCGCCATCCGCTTCTACCTCCAGATTATGGGGAAATAACCCGGGTTCCCTCCAGAGTCCCTTCTCAGTTGCCCAGACAGAGGCGAATAGTCCTTCATTCTGGGGGAATTAAGCCTCTTTTTTAACCTTCAAAAGGAAAGGAATATCAACCTTACGTGAGACTATAAACGAAGGGTTAAAACCTCTAATAGATGCACTCCCTGGTTTCTTACAAATGCTTTCTGTGTCTGCAAATGTCACATAATTGTTTTGGGATAGGAACAATACAAGTCTAATGGAAGAAAAGTTTTTAAGACCCCCTTAGTACTTTTATTTTACCAAAACCTCCTCTTCCAGTGCATTAGCAGCTTCATTCTTTGTGATGCTTTCCTCTTCATTCTTTAGAGTAATTTTGTTACTTGACAACTAGACTTAAAGCTGCCTGTCGTCTCTTTCTAAAAACTTAATCTTTAAAAAGACATCAATTCTTCTATGCCTTAAAGGCTGTTTTTGTTCACCTCTCCCACACCCCCTCCACCTCACTTTCTTGCTTTTTTGTGTGTGTGGTTTTTTTTTTTCCTTTTAATCTCTTTCTTCTTTTCACATGGTTCCTTGGGTAGATTTCATGTATTCTATAAAGAACTCAAACAGAGAAACATAGTTGTCACCTTTTTTCCCCAGGACTGACTAAGAATTCCTTCTTAAGTTTGATCTTGGTGAAAGCTAGTTGCCCAAACACTGGGACAAGGATTCTGATCTGGGGGCGGGGTGGGGGGTTGGTGGTGGTGATGGCAGGTCAGTGCCGATAATCAAAACAAGGGCCGTGTGATGACAAGAGAGGACAGCCCAGGAGATGGACCTGCTCAGGACACGGCTGGGGACTCAGTTTCAAAGACAAGCAGGTCCTTCTCCTTAGTCTCCTGAGATGTGAATCTCATCCTGTAGCCAGAGTTTATCAATGTGAAATATTCGTGGCTCTGAGACACAGCTTCAGGGTCAAAGAGAACTGTGCTTGCATTGTTTTGCTCTGCTGACTTACTCCAGGAAGGAGATGGGGAGCCTTCTTTTGAAGGTGAACCACCTGTGGGAAGCTTAAGGAAAAATTAGCCAAGGAGGTTACACCAGCCCTTAATAAAAAGCACAAAATAGAGTCTTCCCTGAAGATCTCATTTGGGAAGATGGCTAGGAGCATGGTACCCTGGTTTCTTCTGGCCATCATCTTGGCTCTGCAGGGAAAATTCTGGGCAAGTGTGGCAAGCCCTAAGATCTGACCTTTTCAGGGTGAAATTTGCCTGTGACAGATAGAAGTGCCTCTGAGTAGGGACTGGTTTTAGACATCCTGCTCAACTGGAGAATTCCATGGACAGAGAAGCCTGGCGGGCTACCATCCGTGGGGTCGCAAGGAGTTGGAAACGAGTGAACGACTAACCCTGACTGACTCAGCAGCACAGACTGAGAAATTACCAACACAGAACAGCAAAAAAGGGGTATAGAAGGCACTGTAAATCTGGAGTTTCCATTGCCACATATACCGCTATTTTAAAACCTTGCAGAGCCCCAAGCATCCTTACTTTAGAGGCTCCTTTCCTCAATTGTATCAAGCACTGGAAGGCACCAACAGCTTAGGCCTCATAAAATTTCAAAGTAACCATATGACTTGCATTGAATTGCAGGTGACTGGCTTACGTTATAGATATTTAAACATTACTTCCGATTATACAATATCTTTTTCAGCTGTGGGAGCCAGTGGCGTGGGGTTTCATTGTTTCCTTCATTGTTGTTGTTTTGCAAACCTCCAACATTTATGGAAGCCTTAGAAAGGCTCTTAAAACCAGGCCTTTTTGCCTAAAGGACAGTGATTGAAACAGCCATTTGATGTAAACAAGGAGACTTAAATTAAGCCAAAGTTGGAGATACTACCACCTAAAATCTTTAAGGCTGGTTGCCTTCTGCATTGTTTATAGCCTTTTAAATTTCAGCCATTAGGATCAAAGGAAATAAATAGGCTGCTTTCACGTGGCCTTGGCACAGTAGCACACACAACTACTACAGGTGGAATTCTAGGCTGAGTTGATGTGCCAAAGCACACAGATCTGTCTTATGTGGTTGTATTTAATCACCACCACCCACCCCTCAATTTCTATGAAAATATATTCAAATGCTTTACTCACAAGAAAATTCTAAAATGAGACTCATTATTTAGATCATTGCTTCTCTCATAGGAAGGGGTATTGATTTTGTGACATAACCTTGAAGAAAATCACCTGCCATTAAATACCTTGACGGTCACTTCTGTTCCAATCCACAAGCATACCCTGGTCTTCTTCCATCTCCTCAGAGGACTGCCCGGCCTCCCTCTTAAGTAGCACACGTGTTATAAAGACCCCTTCTAAAGCTCTGAATAGACTCTCTGTTCAAGCATAATTCCAAAAATGCAATTTGAATTTTGAGTACCACCTTGGTCCTTGATATGACTCCCTAAATTAATTCTAATTCTTTATATCTATTTTCAGTGTTTTTTTAAGCCACAGTCAACTGCATTTATATGTTTGCATTGGTCACTTCCCACTCACTCTGTCGCAGCTTTTGAGCAAGCCTAGACTATAAAGAATCTGCCTGCAGTGCAAGAGACCAGGGTTTGATCCCTGGGTCAGAACAATCCCCTGGAGAAGGGAATGGCAACCCACTTCAGTAGTCTTGCCTGGAGAACCCCATGGACAGAGGAACCTGGTGGGCTACAGTCCATGGGGTCACAAAGAGTCAGAAACAACTGAGCAACTAACACCTTCACTTTTACACCAATTCCCATTTAAGACATTTGAGAAAAGACCAGAAATATTTCCCTGTGTACCAGCTGCAGAAGTTTTTAAGCCCATAACCAGGTTCTTCTTCACATGAAAAGGCCCCTGTTTATAGGTGGAAACCTTAAAGAGAAATGGGGGCATGCAAGGGGGTAGGAATCACATTTGTACACTGGAAGCTTTGTCTTTTTCATCATAATCTCACTCTCCCATCACATCACCCTTCTCTTTCTAAAAGCAGTAGCCTCTTTGCTGAGTGAGTGTTGACCTCCCACTTGGGGTAGTCAGGGTTCCACTTGCTTAAATTCACTCAAGGAGAATTAGAAGGCTCTCAGGGGCTCTGAGTGATTCCAACACCCCTACTTTTCCTTCCCCAGTCGAAAATCGCTATCCTTATGCGACCATGTTTGACGAGACCATGATTTAACAAGTGGAAGTTCCAATTTCAGAGAGCTGAATAAAGCCAGCTTCTTGACCCTGCCCTGTCTCAGTCGTGATTGGCACAGAAGCAACTCATCTGCTGAAAAGCCAAGGCAGCACGAATGTTTTGAAACGAATTCCACTAAAACTCTTGTGTCACTCTATCACACCTGCTGTAGTTCCAGTTAATCCAACTATTTAGTATTGTTAGCTACCAAATTAAACAGCTGTACACAAAATTTTAGAAAAAATCAATACTGTAACACAATTATACATTAGCCATCAAAAGTACCCGAGAAAAGAAAATATTGAACTGTTGTTTCTGTACTTGAATTATTCTTAGGATTCTGTGGAGAGTGGCACTGCTCTGATAAAGGGGAAACCGTTTCGAATTCAAGAATACTTGCATTCAAGAGAAATTGCACGTCTCTCTGGGCCTTTGCTCATCTGTCTGGGATGTTACCTGTTCTGTCTTAGCAGACAGGGTTGTTTGGAGGCCAAATTGAGCCAAAGGGAGAAGCTGTTCTGTATCACCAATGTCTATGTATTCATCATGGTGAGCAGGGCGATGGGCTTTCATCAGTGAGTTCCTTTCCCTTGTATTATGCCTTTCCCTCATAGCTGTTTTTTACTGAGTCCATTCTGGGATGCTAAAAAGTAAAACGGTAAGAAAGCACCAATCAACATTTTGGGGAAGCTACCAAATTATTTGAAGGGATGCTACTTAGGAAGAAACTTCCGTAGATGTTTTGGTACAACTTATAAAAAAGGTAAAGGTAACTCAAGCATTTTGTATGCACACACAATACATGGGGGCTGGTCTGCAGAACCTATGGCTAGGGTGAACATTTATCTCCCCCTCCCAAAGGTTTAGAGCACTGTGACCGAGCTGAGGGAGAGAGTTCTGGCTGGGCTGAGCACAGGTGAAGATTGCCAATCCTCAGGTTAAAGAAAGCCAATGAAGTTGATGAATTGCGGGTCACAGGAAACAGCCACATCGAACTTCCTAGATGAGCTGGTGTCTTTGTGCTAGGAAAGGAAGAGGAAGAAAAATCACACCATGTGAACTGAATATAAAATGAGTGCTTTCAGTTGCATATGAGTGGGAAAAATTCTGACCGAAAAAAAAAAAAGTTCACTATTTTATAAACACTAACAAACATGGCTATAAAAGCACATTTCATAACACAAAAGCCTACGTAGATGGGAGACATTTTTATAGCTTCCTTAAGTGAGTAGTTAAACCAGCAGTC EMBV3_20947 TTTCCTCTCCCTAGAAGGTGAGCTCCTGGACAGCACATACCTCGATCATCTTGTTAGATG Gene GeneID:524980|SEPT14:NM_001102087:350_cdna Constitutive 0 NULL GeneID:524980 25 GENE SEPT14 MGC165773 Septin-14 septin 14 EMBV3_11108 GGGCGAGCACAGAAGAAAATTGAACGTCTTGCTGAGTTAAGGAGAAGATTTGAGCGGCTG Gene GeneID:511286|PABPC5:XM_002699760:17_cdna Constitutive 0 NULL GeneID:511286 X GENE PABPC5 NULL poly(A) binding protein, cytoplasmic 5 EMBV3_25693 AGATCCGCGTGCTGAGCCTACAGGGCCTAGGGAACATTCTTTTCCACCCGGAGAAGGGAA Gene GeneID:100298824|LOC100298824:XM_002692598:359_cdna Constitutive 0 NULL GeneID:100298824 14 GENE LOC100298824 NULL hypothetical protein LOC100298824 EMBV3_23018 ATGCTGTATCCTTGGGAAAGTATGGGGCTGGTACATGGGAGAGTGCAGACAGTGGATGGA Gene GeneID:517066|ZDHHC1:NM_001075747:255_cdna Constitutive 0 NULL GeneID:517066 18 GENE ZDHHC1 NULL zinc finger, DHHC-type containing 1 EMBV3_35811 GTAAATGAGTATCAGTGAGTCACTGGAGAACTACAAACTTCCTAATATGCATGCACTGAG Gene BVV0102_043660 + 1 EMBV3_28690 GK000020.2:12139487-12352177 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27457 GCCTGGGTTTGGCAGTTGTTGGACCTTAAGAACTCAAAGGACTTCTTATAAGTATCTTCC Gene GeneID:512841|CRK:XM_002695681:213_cdna Constitutive 1 NULL GeneID:512841 19 GENE CRK NULL v-crk sarcoma virus CT10 oncogene homolog (avian) EMBV3_17795 CACTGCTGCCTTTGTGGAAAGTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAAT Gene GeneID:515582|UBR5:XM_002692760:106_cdna Constitutive 2 NULL GeneID:515582 14 GENE UBR5 NULL ubiquitin protein ligase E3 component n-recognin 5 EMBV3_28070 GGCCCCAGCCAGGAGTGGATTTTTTGATGAGAAGTGCTACAAGCTTAAAGGGAAGTGCAT Gene GeneID:100296581|LOC100296581:XM_002698621:17_cdna Constitutive 0 NULL GeneID:100296581 27 GENE LOC100296581 NULL similar to beta-defensin 15 EMBV3_22056 AAGTGCTTCCGCTACAAGCAGTCGCTCAAGTACCACCTGCGGACCCACACGGGCGAGTGA Gene GeneID:517496|ZNF777:XM_002687037:125_cdna Constitutive 0 NULL GeneID:517496 4 GENE ZNF777 NULL zinc finger protein 777 EMBV3_20240 CACTGATGGCCAACGTCTTCCACTTCTGCCTCCTGATGCCCGGCCTGGTCTTCAGCATGT Gene GeneID:504885|SLC22A18:NM_001083374:239_cdna Constitutive 0 NULL GeneID:504885 29 GENE SLC22A18 MGC138993 solute carrier family 22, member 18 EMBV3_12403 GTTCATGCCGCTGTCCACCCAGGTCCGCTTCAGCGTCGACCGGCCCTTCCTGTTCCTCAT Gene GeneID:100125764|SERPIND1:NM_001105046:2_cdna Constitutive 0 NULL GeneID:100125764 17 GENE SERPIND1 MGC157268 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 EMBV3_21769 CAGCAGGGTAAAGGGAACTAAATGGCTTTTTGATATCTCGTTTTTCAGCCTAGGAGTTAG Gene GeneID:538761|CLDN8:NM_001098096:11_cdna UTR3_Alt 1 NULL GeneID:538761 1 GENE CLDN8 NULL claudin 8 EMBV3_15744 GACTGTGGGTCTTCGGGGACCAACCTCCTGGCACGTGGCGTCAAGCGGGACCTGGAAAAT Gene BVV0102_362011 + 1 EMBV3_11805 GK000022.2:11307087-11345920 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129922 1 XLOC_078634 NonCoding TCONS_00129922 XLOC_078634 NonCoding NonCoding - 22:11344389-11344763 - TSS96789 374 1 0 7.27576262615965e-05 0 0.000321663403474587 2.22035902639385e-05 0.000211216666083501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000230741729492984 0 0 0 0 9.26267761782994e-05 0.00111145166555115 3.13322857669986e-05 0 0 0 0 noncoding 0 0 0 0 -0.0222399651659566 0.849534968135458 0.0191323449968268 0.712147323383389 CCAAGTTGCAAGGCGAAGGCGCGGGAGCGAGACGGCCCCCGGGCCCTCCAAGTGTGAGGGGGCACTTTGGCTTCATGCCAGCGCTCTGGCCCTCGCCCCAGGTTTGACAGTGGCTGCCTGCTCTTCAGAAGTACAGTCCCTGCTCAGCTCGGCAGCCACAGGCCCCTTACTCTCCTCAGCCTTCCACTCGCTACCCAGGCTGGGCCCCTTATTGCAGAGCACCCGGAAATGCCCATTTTCCAGGTCCCGCTTGACGCCACGTGCCAGGAGGTTGGTCCCCGAAGACCCACAGTCCAGCACGCGGGCTCTCGAGGCCGATGCTGAAGTGGGTTCCTCAGGCATTCCATGCCTGGAGCCTCCAGCCCTGTCCGCGG TCONS_00126034 . 5' 1146 TCONS_00126034 . 5' 1146 EMBV3_25207 TTAGATTTCGACTTCCAAGAAATCACGGAGGAGTGGCAAAGGAGAGGTGGGCAGCCTTGG Gene GeneID:768208|AOAH:NM_001078096:10_cdna UTR3_Alt 2 NULL GeneID:768208 4 GENE AOAH MGC142308 acyloxyacyl hydrolase (neutrophil) EMBV3_10229 ATGGGGGACAGCTCCTGGGGATAAGCGGGCCCCAGTTCTGTGCTGTCCGTGCCTATGAGA Gene GeneID:516233|NOXO1:XM_002697857:354_cdna Constitutive 0 NULL GeneID:516233 25 GENE NOXO1 NULL NADPH oxidase organizer 1 EMBV3_30049 AGAGGTGTCAACTTCGGAGGAGCCAAGAGGGGCCGAGATGCATCCAGAGCGTTTGTGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00893 CGCTCTCAGTCCTGGGATCCAGCCTGCCTCAATCAGTGTTCATATTTATAGCCCAGTGCT Gene GeneID:510850|SERPINH1:NM_001046063:22_cdna Constitutive 0 NULL GeneID:510850 15 GENE SERPINH1 MGC127397 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) EMBV3_29717 CACATCACTGTGGTCAGTCTGTTCTTTGGGCCGTGTATCTTCATCTATGCCTGGCCTTTC Gene GeneID:512103|LOC512103:XM_002690691:306_cdna Constitutive 0 NULL GeneID:512103 10 GENE LOC512103 NULL similar to Olfactory receptor 4L1 (Olfactory receptor OR14-28) EMBV3_41945 AGTCAGTCTGTTGGGATAGCGGGAGTTCAGGCTTTGCAGACTCATTCCTGTACCGACTTT Gene BVT0102_115303 + 0 NULL GK000016.2:34400413-34415700 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069064 TCONS_00069067 TCONS_00067063 TCONS_00069065 TCONS_00069066 TCONS_00069070 TCONS_00067064 TCONS_00067062 TCONS_00067068 TCONS_00069069 TCONS_00069071 TCONS_00067066 TCONS_00067061 TCONS_00069068 2 XLOC_041854 XLOC_041349 Coding TCONS_00067064 XLOC_041349 Coding Coding AKT3 16:34132565-34408649 = TSS50521 5855 1 TCONS_00067064_3 479 13 0.978839696757859 0.000854163684046248 1.64811772499212e-08 6.30359169227583e-05 0.000867309957367647 6.24634738046921e-09 2.8877769824265e-06 1.67192425583266e-08 0.000538785323922184 7.33391587437903e-13 0.000249683830060808 9.81118678854625e-10 0.000240312953947286 0.000136967897927469 1.85474121935967e-08 0.000376711673301223 0.00273573379398271 0.00202624411280537 0.00327659805929897 0.000487040830774704 0.000821350627114511 4.68125954254145e-05 0.00108543674709859 0.00113963265229251 4.16176685775476e-07 0.000924717836581818 4.83837913516875e-08 0.000128329239590168 3.1657233261549e-09 0.000310468875330077 0.000302915984271359 XM_005216793.1 AKT3 PREDICTED: Bos taurus v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) (AKT3), transcript variant X1, mRNA. 0.0 1.026e+04 100.00 0.971135781383433 XM_005272995.1 AKT3 PREDICTED: Homo sapiens v-akt murine thymoma viral oncogene homolog 3 (AKT3), transcript variant X2, mRNA. 0.0 6967 86.61 0.999658411614005 TCONS_00067064_3 sp|Q9Y243|AKT3_HUMAN AKT3_HUMAN RAC-gamma serine/threonine-protein kinase; 0.0 1001 100.00 0.997912317327766 5 coding 0 0 0 0 0.0512034205357713 0.67522090655542 0.0131612213430097 0.776267691585552 CCTTCCAGGCTGAGTCATCACTAGAGAGTGGGAAGGGCAGCAGCAGCAGCAGAGAATCCAAACCCCAAAGCTGGTATCACAAAGTACCATTTCTCCAAGTTGGGGGCTCAGCGGGGAGCCATCATGAGCGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAGATATTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCCCAAGATGTGGATTTACCTTATCCCCTCAACAACTTTTCAGTAGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATTATCAGATGTCTCCAGTGGACCACTGTTATAGAGAGAACATTTCACGTAGATACTCCAGAGGAAAGGGAAGAATGGACAGAAGCTATCCAGGCTGTAGCAGACAGACTCCAGAGGCAAGAAGAAGAGAGAATGAATTGTAGTCCAACTTCACAAATTGATAATATAGGAGAGGAAGAGATGGATGCTTCTACAACCCATCATAAAAGAAAGACAATGAATGATTTTGACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAATATTATGCTATGAAGATTCTGAAGAAAGAAGTTATTATTGCCAAGGATGAAGTGGCGCACACTTTAACTGAAAGCAGAGTATTAAAGAACACTAGACATCCCTTTTTAACATCCCTGAAATATTCCTTCCAGACAAAAGACCGTTTATGTTTTGTGATGGAATATGTTAATGGGGGAGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCCGAGGACCGCACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATTCCGGAAAGATTGTGTACCGTGATCTCAAGTTGGAGAATTTGATGCTGGATAAAGATGGCCACATAAAAATCACAGATTTTGGACTTTGCAAAGAAGGGATCACTGATGCAGCCACCATGAAGACTTTCTGTGGTACACCAGAGTATCTGGCACCAGAGGTGTTAGAAGATAATGACTATGGCCGAGCTGTGGATTGGTGGGGCCTTGGGGTTGTCATGTATGAAATGATGTGCGGGAGATTACCTTTCTATAACCAGGATCATGAGAAACTTTTTGAACTAATTCTAATGGAAGATATTAAATTTCCTCGAACACTCTCTTCAGATGCAAAATCATTGCTTTCAGGCCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGACCAGATGATGCAAAAGAAATTATGAGACACAGTTTCTTTTCTGGAGTAAACTGGCAAGATGTGTATGATAAAAAGCTTGTACCTCCTTTTAAGCCTCAAGTAACATCTGAGACAGACACCAGATATTTTGATGAAGAATTTACAGCTCAGACTATTACAATAACACCACCTGAAAAATATGATGAGGACGGTATGGACTGCATGGACAATGAGAGGCGGCCGCACTTCCCTCAGTTTTCCTACTCTGCAAGTGGACGAGAATAAGTCTCTTTACTTCTGCTACTTCACTGTCATCTTAGGTTTATTACTGAAAATGATTCCTGGACATCACAGCAGTCCTAACTCTTACAAATGCAGGAGCACCTTCAGACATCCGAGACCAGTCCAAGGTCTTCACCCTTCGCCGCCTTTCACCCACATGAGAATACACATATACGCAGACACACTCGACATTTTTGTTTTTGCATGAAATTGTATCTCAGTCTAAGGTCTCATGCTGTTGCTGCTACTGTCTTACTATTATAGCAACTTTAAGAGGTAATTTTACAATCTTTGAAAGTCATGAGCCCACCATCGTTCATTTGTGCACCAACTGTCATCTTTTGATCTTTTAATTTTTGTTTTTCCCTAACAGTGAAGGCTAAATGATTCTAGGTACATTTTTTAACTTTCTAGATGATAAATCAAAAACTAATTAGACTAAGAAGATTTAGTTTTTAATTCAGAACAAGCAACTGTGGAAGCGTGGTGATGTGCATATGCAGAATCTTAGTAAAGCATATCAGCTGAGTGCATAAAATAGGTATGTACCAGTAAGATCCGGCTGGAATTCATTAGGAAGCATTTGAGAGAAGGACTGAACAACTGTTAAGATAGACAGATGCGTTTATAAATTGAAATGCCTGTTCAGTACTGCAGAGGAGGCCTGGTGTTCCACGTGGACGTCCAGATTTCACAGGCTCTTACTGGCAAAGGAACGTTGTTCTGCCAAGGAAGGAAGCGTGTGCACAGCAGAGTAGATGACTTAAGGGTCTCCGACATGATTTGCACCAGAGAGCATTTTATTTCCCCTGTGCTTGGAAACCTCTTCCCCTTCCTGATATTATCACCTCTGATGGCTGAAGAATGTAGACAGGTGTAACGATCCTGTTTTTCACCAAAATCTGTACACCGAGGTGAACAGGCGTTCACCTCATTTGTTTCAATTTGTTTTACTTTCAGTTCTACGTGAAATAGCTTTTTCTCAGATGTTAAAACTTCGAATGTCCTTTGATGATTTTGTTTGTATTGCAGTAGTATTTATTTTTTAGTGATGAGAACTGTACGTCATGTTAGCGAACGCAGCTCCGACGTACGTAAAATAGACTTCCTGCAGCTTCTTCTGACCCATGTGCAAGGAATGTGCACGCCCGTGAGGCTCATGCACTTTTTCTCCTGTGTAAAAAAAGTTTTGATGAGGCTCTGAAATTGTACATATAGATTAGAATTTGGCTTTGGGAGAAGAGATGCTGTCATTCAACCCCTTGGTGCTAAAAATGAGAAATCTTCAACTATCTATGCCAAGGGGTGGAAACAAATGGATGTTATATTTGCTATTTTGAGAATTGAAAGGTTATGATGGCCTGGCAACATGATATAATGAAGAAAATTGAGACCTGGATGATAAGAAATGGACTTTATTTTGCAAAATGAACACACCTCAAGTATTTACAAAGTGGGCAGTAAAGGATAAGGACCTGGTGTGTTTATTCTGATCATGGTACATTTATCACTGAATTAAGCCATCAGGGAGAAAAACAAAACAAAAAAGAACACCTCTGACTTTTCTTTTTCTGTATATACTCATGTCCTCAAATTCCAACATTTCTCACTGAAAGGGGACATGTATGCAAACCTCATCTTTCTCTTTCATTAATGATGATCTTCAGATTAAACCCTTTGGTGCTAGGAGCTGACATTTTCCAAAGCAGCCTATGAAGTCCAGGGGGCAGGGGGCCCTTGTTATGGCAAGCTGGAGGCCTCCTGACTCCATGGAGCCATCGTGGAGATGTATTTTAGTTAAACTATCTAACAGCTCCCAAATGGAAGACTACAGCGTGCCGTAGTGTTATGATTGCATTGTATGAAAGAGCAAGTGACTTTCTAAGTGGGATGAATCATATTCATATGCAAATGTCTTAGCCTCTTGATGCTGGAAGTGTGGGTTTATAGACAGGAAACCACTGCTGGCAGTGGGTGGACCACTGGGACTGACAGGGGGTTAAAGGGCATTTTACTAAGGCAGCTAAGACATATTCAGACATAGATTTTATCCTAATTTTTCATATCTCTATCTGAGTGAAGTTCATCCTTAGTACTGAGTAGGAAGTTACAGTCAATGATAGTTCATTCTTACTTACACACATAGCTCAACTTTTTTTTTTTTTTTTTTTCCACTTGGAATTATGTTGAATGTTTCACTTTGACAAGGAAGTAGACTAGAAGGTATGTCCTGTAAGTTGTCTTGCATCCATTATGTAAAAAAGAAACAGGCGAGAGGAAGAGAGGGAAGCTGAGACTGGCTGGCATTCAGAGCATACATTTCTTCAGAGGGAAAGTATAATACCATACACTAAGCACACAGATGGTTTTGGTTTTTGGTTGTTTTTTTCCCCCCAAATCTTAAGGTGATTTCCATGACCTTGGCCAAGGACACTTCCTACGGATTAATGACAGCATTGACTGTGCCCCAGGGTGGCCACTCTGTACAGCCGGCTCCCCGTCCCCAGCTGGTGCCTGGGGCTTAGTCTCGTATCCCCTCTGAGATTCCGTTAGTGTCACACAAGGGTTTTCTTGGCTTCGATTTTGAGAATCCCTTACTTTCATTCCCTGATCTCAGTCAGCTGACATGGAAATACAAGAGACAAACAGAAACTGCGTATAGGAGATTCTAAAACTTCCCTGGTGCCTGCCCACAGCTGAAGTTTTGGATTCTGGCAGATGGAAAGGCCTGAACCTGGAGTCAGTCTGTTGGGATAGCGGGAGTTCAGGCTTTGCAGACTCATTCCTGTACCGACTTTCACGAAGTCTGCCTCTTGGCCATAATGCAGCCATCTTGGAGGAAAATTGGCCGTTTCTGCGTGGATTTCTGGCAGGGCTGCTCAGAGCTTTGCTTTCCACACTAACTCCATAGCATTATTCCAGTGTTTCCCATTTCCCATACCTGATCTCCAGCTTCTCAAAGCTGACTGTTCTTGCAGGGGCCACTTGCTTCTCTTAGAGTCCATAGTAAGGGCCTTCCTTACTAACTGCAGGGTCTTTCTATTACACGTCAGTGTACACACTTTGCTGCTACTGTTTGTACTGTCTACAGTAGAATTTCCTTATCTTGCTCCTGGTAGTGCATTACAGGCAAGCATGAAATGTAAAGTATTTATTTAAATAAAAAGAAAAACCTCTAAATTGGTAATTGAATTACCTCCCTGTAGCTTTATAGTTTGTGACATTTCTTGACCTTGCTAGTTCTTTCATTAGATCCGCACAAGATCTAGTCATCTGGTTAAGGATTTTAAGCAGACGCAACTACGAACCCAAGAAACTGTATTTACTCTTACTGTTGGTCATACTAAAACTGTTTCTTCCCTTCAGTCTATGACCCACAAGGATGTGAAATAACTACAAGAAACTGTTTTGTACACTGTGCATCCTTAGTATTTTTACACGTATATGATAGGGACGCACATTATTTTCCTTCGTACAGACAGCTTAAATAAAGCACTATGTCAATCTGCTACTTCTCTGTTTATTGTCGTTGGATGTGGTTCTGTAATCTCAGAAAACTGAATATCCTTCTTTTCTGAAAAGATGTAATAGGTCCACCTGGTATTACCGCATTCTAGGAAACAGGAAAGTACGTAAATTTCTTGTAGCTCGAAAAACACACAGGACTATTTTACTACTTCAATAAGATGGCAGTGGTGCAGCTACAAAAGGGCTGCTTCCAGGGGGTGCCGACTTCTCAGCGGTGGGTCTAGGAGGGATCTGTGAAGCTGGAGGTTGATCTTTGTGGAGATTTGTTAAGTCCCTAATAGTCCTCACATCAGGTGGTTTGACCCCAGAATTCTTAAGGAGTGTAGCTCATCAGCACTGTCTTCCTAATAATGTGTTGCTCTGCATACTTCCTTTCTTAAGAGTATATTTTTAAAACTTCATGGCAGATTAACCAACATAGAAATGGATAATAGATGGGTAGGATGGTTGGACTACAGTCTGATTTACCTAGGGTCATTTTGGATGGGGCCTTTTTCTGATTTTACCTCATAAACCTACTATTGATGAAACTTGGCTTTGCTCCTGTGACTAAGCCAGACAGAGGAATGGCTTTGGGACCAAAGTTGGTCAGGCCTGTATGCGCGTGTCGCACAGCCAAAGTGGAGGGCGTCCTAGCACGTGCTCTTCTCTCAGAACCACTGGGGCTGACAGATCAGGAGGCTTCCATAAAGTGACCTCTGTAATTCTTTAAAGGTGCTATATTTTTAGAATATTGTATAATTTATTTACTGTCCCTGAAACAGAAT EMBV3_00291 GCTTCTATAAAGGCATCTGCTACGAGAAGGCTGTGCCCAGTTACGTGCAGGTGTTTTCCG Gene GeneID:617473|C12H13orf16:NM_001076461:66_cdna Constitutive 0 NULL GeneID:617473 12 GENE C12H13orf16 C13orf16 chromosome 13 open reading frame 16 ortholog EMBV3_34110 GGGGAGAAACCATATGAATGTAAGGAATGTAGGAAGTCCTTTTCCCAGAAATCACACCTC Gene GeneID:530225|ZNF25:XM_002698819:23_cdna Constitutive 0 NULL GeneID:530225 28 GENE ZNF25 NULL zinc finger protein 25 EMBV3_36902 AAACAAGGCGATTGCTAGAGAGCTTCAGAGACTCAGCATCCGGTATCTTTCGTGTCCTCC Gene GeneID:100139785|LOC100139785:XR_084010:406_cdna Constitutive 0 NULL GeneID:100139785 21 PSEUDO LOC100139785 NULL similar to modulator of apoptosis 1 EMBV3_15912 AGATTATGCATGACCAAGGAAGGTGCTGCAAAGCTCAGAGAAAAGAGAACAGGGATCTGC Gene BVT0102_008086 + 0 NULL GK000022.2:18018235-18701583 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126418 TCONS_00126409 TCONS_00126414 1 XLOC_077431 NonCoding TCONS_00126414 XLOC_077431 NonCoding NonCoding LOC100848430 22:18468162-18639217 o TSS94819 535 2 TCONS_00126414_2 51 0.325233644859813 3 0.996889871034878 1.41286694513075e-12 2.2474992822323e-23 0.000359916435026478 0.000291199444713604 8.69644640696991e-112 0.000257984756791526 0.000778726112130344 0.000129720601941716 0.000108461441772267 0 0 0 0.000128420602252703 0.000210002595100798 0 0 0 0 0.00166091677231596 0.00159879444415816 0.00115291286842434 0 0 0 4.58745855192887e-137 0.000105691784059724 5.03811632414113e-05 0 0 0 XR_249146.1 LOC101927723 PREDICTED: Homo sapiens uncharacterized LOC101927723 (LOC101927723), misc_RNA. 2e-07 60.8 75.27 0.17196261682243 0 noncoding 1 0 1 1 -0.59257761846991 0.0152919396603755 -0.0623287286976562 0.365714291113777 GGTAGTTGTGATGCGTGCAATCTGCCATTCAGTGCCCCTGAAATCACACCAGAGGGTTTGTGATCCTTGTGGATTCCGGTGCTTTGCAGAGGAAGCAGGGCAGGAGGGCAGCAAGTCTCTGTGAATTCCCACTACAGTTTCGTGACTTACAGGCCAAGTTCTTGAAAAGATTATGCATGACCAAGGAAGGTGCTGCAAAGCTCAGAGAAAAGAGAACAGGGATCTGCAGACCCTGTAGGCACTGGAGACCTGTGACTTGCTCCCAACGTTACCATGGAGAGATGAACAAGTCACAAGAAGTGAAATATGGAATAAGCAGAAGAGAGTGCTAGGTGACTCCAATGGAAAATTATGCATATGACTTTCTGGGTTAAATGATTCTAGCCTTTTATTGCCTTTGAGTTATTTTGCAACTCAGTACATTGTAACTAATAGTAATGCAAAATAATTCGTGTCTATGTGCATGCAAATAAATTCTGTCCAAATTGGGGGATCAGTTGACTTCTTTCTCTACCCTTTTCATTTATTTGTAAAT TCONS_00126441 TCONS_00126442 s 3' 61419 TCONS_00126441 s 5' 102606 EMBV3_20233 CCTTACATCACAGAAAACATTCAGAAGGAATACTGTTGCAGCTGAAATTGGTGGGGAGTT Gene GeneID:535947|CRY1:NM_001105415:13_cdna Constitutive 0 NULL GeneID:535947 5 GENE CRY1 MGC139066 cryptochrome 1 (photolyase-like) EMBV3_38604 TTCTACAGATCTAGTTGAATATGTTGACAAATGATAGAAGAACAAATAAAAGCTCGGGAT Variant GeneID:514910|FAM81B:NM_001075688:5_cdna 300^543 1 EMBV3_05245 GeneID:514910 7 GENE FAM81B MGC151951 family with sequence similarity 81, member B EMBV3_36769 TGCCTAGAATTCTCTAGCGTTGTAGTGTAGTTAGATACTAAGAGCTCAAAGTAGCTTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32791 GCTGGGAGAGAATAAGGACAGAAGCCCCCCACCACAAGCTATAGTGTCCTTGACTGCATT Gene GeneID:510492|ROGDI:NM_001075452:129_cdna Constitutive 1 NULL GeneID:510492 25 GENE ROGDI MGC140572 rogdi homolog (Drosophila) EMBV3_19242 GTGCTGTGCTAAATTGCTTCAGTCATGTCCAACTCCTGTGATCCTGTGGACCATACCCTG Gene BVV0102_322219 + 0 NULL GK000002.2:108998022-109514197 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17463 GATGGAGTTCCCTCGGCTAATAACTATCAGGGCGGATTCGGAACAACACTCATGGCGAAG Gene GeneID:512002|HIBADH:NM_001046106:10_cdna UTR3_Alt 2 NULL GeneID:512002 4 GENE HIBADH MGC128999 3-hydroxyisobutyrate dehydrogenase EMBV3_33474 GGGTTTTGCAGGCGGCTCCAGGCTGGGAGCTTTTGTGTCTGCGACTCGGGAGCGGTGAGA Gene GeneID:540856|PRTG:XM_002690891:27_cdna Constitutive 0 NULL GeneID:540856 10 GENE PRTG NULL protogenin homolog (Gallus gallus) EMBV3_40537 GATGCTGCTGTGGAGAAGCTGAGGCAGTTGTAGGAGCCGTAGTTGTTCAGACCGTATCTT Gene GeneID:617845|UBQLN3:NM_001038583:362_cdna Constitutive 0 NULL GeneID:617845 15 GENE UBQLN3 MGC134169 ubiquilin 3 EMBV3_38981 TGCTCAGAGTAGAAAGTGAGGGCAGAAGTCAGGAGATGGGTGGTGTGTAGGATCACTATG Gene GeneID:404134|TMBIM1:NM_205798:47_cdna Constitutive 0 NULL GeneID:404134 2 GENE TMBIM1 RECS1 transmembrane BAX inhibitor motif containing 1 EMBV3_41677 GAAGAAACCTCTGGTGGCACTGGTGCAGACAGTTATAGAAAACACTAACCCTTGGGACCG Gene GeneID:506702|TDRD7:NM_001100309:11_cdna Constitutive 0 NULL GeneID:506702 8 GENE TDRD7 NULL tudor domain containing 7 EMBV3_09178 TAAGACTCCATGTTCCAAGCCTGGGGGCTATGGTTCGATCCCTGGTTGGGGAACTAATTT Gene BVT0101_050903 - 0 NULL GK000011.2:49811660-49933203 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32241 TGTACGTGGGCTACACCCGCGTTTCTGACCACAAACACCACTGGAGTGACGTTCTCGTCG Gene GeneID:504545|PPAP2C:NM_001045890:23_cdna Constitutive 2 NULL GeneID:504545 7 GENE PPAP2C MGC138011 phosphatidic acid phosphatase type 2C EMBV3_31371 AGTGTACCTTAGCTCTCCTGCTACCCACAGCTCACACTCAAGTGCAACAGCCTCGGTGAT Gene GeneID:100298645|LOC100298645:XM_002688714:3_cdna Constitutive 0 NULL GeneID:100298645 7 GENE LOC100298645 NULL similar to olfactory receptor, family 7, subfamily A, member 5 EMBV3_39206 CACCTGCTCTTCACACATCACAGCAGTGGGACTCTTCTATGGAGCAGCCGTGTTCATGTA Gene GeneID:513491|LOC513491:XM_002688893:151_cdna Constitutive 0 NULL GeneID:513491 7 GENE LOC513491 NULL similar to Olfactory receptor 2Z1 (Olfactory receptor OR19-4) EMBV3_29252 AGGCTTTTGCTCTTGAAGTCATTAAATCTGCTCACGAATGCTGGAGAGCCTTGCTCATGG Gene GeneID:615820|PPA2:NM_001076396:80_cdna Constitutive 1 NULL GeneID:615820 6 GENE PPA2 MGC137465 pyrophosphatase (inorganic) 2 EMBV3_07421 GATGATCTTCATGTCGCTCTACTCCCTTCTCTATATGTCCAGCCTCCTGCCGGCCAAGAT Gene GeneID:286824|HAS3:XM_002694834:733_cdna Constitutive 0 NULL GeneID:286824 18 GENE HAS3 NULL hyaluronan synthase 3 EMBV3_09446 CCAGGTTTGTTAGACCTAGGAGCAGTGAGACTTCTGAGGTTAAGGGTAAGAGTGAGGCAG Gene GeneID:512477|ZNF48:NM_001101958:299_cdna UTR3_Alt 1 NULL GeneID:512477 25 GENE ZNF48 MGC165906 ZNF553 zinc finger protein 48 EMBV3_36835 GCTCAGTTGTGGTTGTACATTCCTGGTAAATGATGACTGTTGCCATCAAAAGGCTGCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37703 AAGCGTGAGGACCTCTTCATCGTCAGCAAGAGCTGGTGGACGAAGGGCTGGTGAAAGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00964 TTGTATTACTTATATGCTAATTGAAATTAAGCTGGATCAGTTCACGTGAGAATTCGACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18656 CAGCACTGGCCAGACAGCTGGAAGCTGCTTTAGAAGAAGGAAGACAAAAGGTTTCTGAAG Gene GeneID:533508|ODF2L:NM_001075993:62_cdna Constitutive 1 NULL GeneID:533508 3 GENE ODF2L MGC143236 outer dense fiber of sperm tails 2-like EMBV3_06445 AAGACCCTACTGTGCTGCCAAAAATACACACTGAATCTTCCAGCCTTCCCTCACGGGACC Gene BVT0102_170462 - 1 EMBV3_27795 GK000024.2:43596477-43639268 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08038 AGATTTGGTTACAGTAGGCTATCTGTTGACAACATTTTTGTAAGCTTTCCCAGTTCTCTT Gene BVV0102_036205 + 0 NULL GK000006.2:80889635-81188567 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09122 GAAACTACTAATGTTTAGCAATGTGATTTATCTATCTGTTCATACATACATAGCTGCCTC Gene GeneID:511661|SLC6A14:NM_001098461:2_cdna Constitutive 2 NULL GeneID:511661 X GENE SLC6A14 MGC151531 solute carrier family 6 (amino acid transporter), member 14 EMBV3_35046 GGACTAGTCTTTGCTGAAACTACCACGAGGTGATCTCTAAGCTCTTGCACTATCATTCCA Gene BVV0101_077706 + 1 EMBV3_17742 GK000012.2:44823478-45220858 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29304 GTACCACCAGTTCAACAAATAGAGTATTTCCAGAAAGTTAGAAGCAATTCTCATGCTCCC Gene BVT0102_234731 + 0 NULL GK000016.2:8242922-8562948 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23238 GCATTCCAAATCTGTGAGGGCCCAAAACAGAATTAGGGGTGGGAGAAAGCACTTGTGCTT Gene GeneID:541248|RSF1:XM_002699063:78_cdna Constitutive 2 NULL GeneID:541248 29 GENE RSF1 NULL remodeling and spacing factor 1 EMBV3_11587 CTGGCGCTCGGGCATCATGGAAGAGCATCTCCTGGAGCCCAGGGATGAGGTGGTCCAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11676 AGGAATTTTACACTCACTGGAGTCGAGGTGCAGTGTGACCACTAAGACTCAGAACTACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40512 TCCTGAAAACCATCAGTTTCCTGCAAAGCCACTGAGAGAGTCCCAGAGCCACCTTCTTAC Gene GeneID:536310|ZDHHC2:XM_002698681:189_cdna Constitutive 0 NULL GeneID:536310 27 GENE ZDHHC2 NULL zinc finger, DHHC-type containing 2 EMBV3_10943 AACAAATTTCCATCTTTGTCGGCAGTGGTGTGAGTAGGCAAGAGAGAAGGGAGTCTCGGG Gene GeneID:528475|POU2AF1:NM_001075915:95_cdna Constitutive 0 NULL GeneID:528475 15 GENE POU2AF1 BOB-1 POU class 2 associating factor 1 EMBV3_08969 AGGACCTTGTCCTGCAGAACTCGGCCGCAGGAACCAAATACCAGGCCATGCTGAGTGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08941 CAGACGAGATTAAAAAAACGTACCCTCCAGATGACCCAGACGGCCTTCATCAACTTGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15231 GGGACGGTACCTGACATGGGTTTGTTGGCTGATGCTATGACGATGGCACTTCCTCCAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35168 TGCTGGAGCGGAGGCTTAGGAGAACACTGCGGGACTCACTAAAATGGGGTGACTCCTACA Gene GeneID:513131|CTBP1:XM_002688450:10_cdna Constitutive 0 NULL GeneID:513131 6 GENE CTBP1 NULL C-terminal binding protein 1 EMBV3_31871 TCCCTGGGGAAAAAAGACCCAAGACAGACTCCCAAAAAGCCAGAGGCCAAGTTCTTCACC Gene GeneID:508948|RSL1D1:NM_001014876:105_cdna Constitutive 0 NULL GeneID:508948 25 GENE RSL1D1 CSIG ribosomal L1 domain containing 1 EMBV3_24663 CTACAACCGCGACGTGCACCCTGTGTTCAGCGAGTTCCTCATCAACACCTACGGCATTCT Gene GeneID:522100|C1H21ORF56:NM_001038677:57_cdna Constitutive 0 NULL GeneID:522100 1 GENE C1H21ORF56 MGC134498 chromosome 21 open reading frame 56 ortholog EMBV3_37179 GCTGGGTGATGGCCGGAGGAACAAGGCCTCCTCCTGTTCCCATAAAGTTGGCTAATAATA Gene BVV0102_252902 + 0 NULL GK000019.2:30251092-30262406 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096315 1 XLOC_057936 NonCoding TCONS_00096315 XLOC_057936 NonCoding NonCoding - 19:30253992-30270838 - TSS71604 806 1 TCONS_00096315_1 53 2 0.952270703472841 2.583774794123e-05 0.00012464602655957 1.5715517148056e-104 2.3744859080891e-78 7.74348677279494e-05 3.6350892059057e-100 1.08519930015464e-05 0.000143310111574451 0 0 0 0 1.16131210785492e-123 1.95001267602298e-118 4.32851847466854e-45 0 0 0 0.000598317747312051 0.000701781916079846 5.73637037625269e-06 7.72555548837655e-62 0 0 0.000157105264764977 6.87211079649066e-05 0.00024280277627802 5.93932432962916e-30 0 0 0 noncoding 0 0 0 0 -1.34240523591021 0.0418712599681821 0.0292676857597088 0.538681958923154 CTGTGGCAGGAGGTGGGCGGGGCCAGAGGGCCCAGAGGCCTTCCAGGAGCGGTGGAGATGCTTGGAGCTGGAGCTGGCTGGTGACTCGTGTAGCTCAAGAGGTGTTAAGTATAAACTTGAGATGTATGCATTTGATTGTTTATAGCTCAAAAAAAAAAAAAAAAAATTGTAGAAGGGACAAAGAGCTCTCCTGAAGGCCAGGCTTGAGAGAGAACAGCATGAGGTAGAGAAGGCATCGGCCATCATGCGCCCTCGCTGCAACAGCCTAGACCGGGTCTCGAACTCCCAGCACCACCAGGTCACAGGATGTGGAGAAGGCACTTGACTCCAGAGGCATCTACTCCTGAGGCTGACTTCCTAGTCTGACCACGGCCACCCCAAGGAGCCCCGTGTCCACATGTGGAGCAGACATCACACAGGAGTGGAGGAAAACCAGTCAGAAGGAAGCCAACATCTGGGGAGGGGACTCAGCTGCCTGCTCTCCAGTTAGCGCCTCCTGAGCTGCCCGCGTCCTGGAGACACACAGCACGCTCTTCCAGTGCGCCCAGGAGCAGACACAGCGCTCGGTCCAGGCTGTGCGGGTTGGTTCTCGCTGGGTGATGGCCGGAGGAACAAGGCCTCCTCCTGTTCCCATAAAGTTGGCTAATAATACACTGCTATGCCGTCTGTCCCCTGCTGATCAGAGAAGGGTTTCACACCAGCCACAGGGCCAGTTAGCCCTGAAAGCGGCCTGTTTCAGCATCCCAAGGCTCCTTGTCTAAGATGTATCCCTCTTTGGATGGAAATCTTTTAAAACACACACACAT TCONS_00096310 TCONS_00096313 s 5' 2902 TCONS_00096310 TCONS_00096313 s 5' 3402 EMBV3_38679 CCCAGGACTTTCTTTGGGGGGAGGAATGGATTATTGTCCACAGTTCAGAGGTGAACCGAG Gene BVV0102_411531 - 1 EMBV3_40118 GK000013.2:64900583-64913635 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14459 CGCACGAGCAGACAATTGAAAGCCAAAACAGCCGAGATGCCTCCTCGCCAGACCAAATAT Gene BVV0102_276332 + 0 NULL GK000001.2:119354567-119437951 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14301 TCCCGACCCGGCTCTCCAGAGAGAGAGGTGAAACGGAAGGTGGAGGTGGTTTCACCAGCA Variant GeneID:505619|KAT5:XM_002699347:228_cdna 387^542 2 EMBV3_17899 GeneID:505619 29 GENE KAT5 HTATIP K(lysine) acetyltransferase 5 EMBV3_24686 CTGATTGGACTCAGGCGTTTGCCCACTGTCTTTTAGTGAACAGTCCCTGCGCTTTAAGGA Gene GeneID:534183|LHPP:NM_001080912:48_cdna Constitutive 3 NULL GeneID:534183 26 GENE LHPP NULL phospholysine phosphohistidine inorganic pyrophosphate phosphatase EMBV3_01833 TGGCTCTCCGGTTCTGCACGGCGCGAGGCGACCCTCTGACCCTGCAGGGCAGGATGACGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19647 TGGTCCACTTCATCATCCCCCTGATTGTCATATTCTTCTGCTACGGGCAGCTGGTGTTCA Gene GeneID:509933|RHO:NM_001014890:101_cdna Constitutive 0 NULL GeneID:509933 22 GENE RHO NULL rhodopsin EMBV3_02078 AAACAAATTGCCGTAGCAATCATAGAGGCCTTGCGACCTGCTGGAGTGGGGGTCGTGGTT Gene GeneID:286815|GCH1:XM_002690949:298_cdna UTR3_Alt 3 NULL GeneID:286815 10 GENE GCH1 NULL GTP cyclohydrolase 1 EMBV3_28738 TGTACATCATTATTGCCAAACCTGAGAGGAATGTCCGCAGTGCCTTCACCACCTCGGACG Gene GeneID:540485|GRM1:XM_002690301:6_cdna UTR3_Alt 2 NULL GeneID:540485 9 GENE GRM1 NULL glutamate receptor, metabotropic 1 EMBV3_35374 GCATTCCTGGGAGCCTGAAGGCCGTGAACGGCCCAGGCTGCAAGCACAAAGGAAGTTTGC Variant GeneID:528253|JARID2:XM_002697579:437_cdna 218^359 3 EMBV3_11825 GeneID:528253 23 GENE JARID2 NULL jumonji, AT rich interactive domain 2 EMBV3_29590 AGGAGGTAAGAATACACAATGGGACAATCTCTTCAATAAGCAGTGCTGGGAAACCTGGAC Gene BVV0101_046855 + 0 NULL GK000001.2:77492295-77596385 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03439 CAGCTTGTCTGGGGAAAGCTGTGGAATATGGGCTTATCAAACCCAGCCAGGACGGAAGAT Gene GeneID:535692|UNC45A:NM_001099072:132_cdna Constitutive 0 NULL GeneID:535692 21 GENE UNC45A MGC148594 unc-45 homolog A (C. elegans) EMBV3_10049 TGGTCCAGTGTATCACCTTTCCTATTGAGTTCAACCACCGGCCCCTGCTCTCTTTTCATC Gene GeneID:281041|CCIN:NM_174005:5_cdna Constitutive 0 NULL GeneID:281041 8 GENE CCIN MGC133688 calicin EMBV3_17174 TACTGGAAATCTATCTGCAATGTGGATGTTTTTCCCACATGACTTATTATGCATAAAGCC Gene GeneID:280760|DCN:NM_173906:5_cdna Constitutive 0 NULL GeneID:280760 5 GENE DCN MGC127810 decorin EMBV3_41210 CTCTTTTTATGAATGCTTACACAATGAGAGGAAAGGAGTTTAAAATTACACATCAAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36212 GTAACTAGCCCCAAGCTGGTTTCACTGGCTGTGGTTCCCATTGCTCCACTCTAAGAAGCT Gene GeneID:531199|PLIN5:NM_001101136:51_cdna Constitutive 0 NULL GeneID:531199 7 GENE PLIN5 LSDP5 perilipin 5 EMBV3_18046 AAGTTACCTGTTGCACCTTTTCCCTGTGTGGCTCCCTCCTTGCTAGAATCTTTCCCCTCG Gene BVT0102_269027 - 1 EMBV3_39414 GK000011.2:46706153-46726810 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11339 GATAATGGGCGAATGGGAGGGGGGATTGGGGTATTACTTTTTACTTAGGCTTGGGATGGG Gene GeneID:540846|ETV1:NM_001046492:47_cdna Constitutive 2 NULL GeneID:540846 4 GENE ETV1 MGC137631 ets variant 1 EMBV3_17538 GTCAAGGCACTTCATCAGTTTATCTGGCACACACGACAACATTTCTTTGGCCCTGAGCCC Gene GeneID:535975|UST:XM_002690316:5_cdna Constitutive 0 NULL GeneID:535975 9 GENE UST NULL uronyl-2-sulfotransferase EMBV3_01507 GCACACCAAGGACCACATAATGATCCCATTTATAGTCATGTCCCCCAGTTGGCCAGTCAG Gene GeneID:504558|CUL7:XM_002697247:445_cdna Constitutive 0 NULL GeneID:504558 23 GENE CUL7 NULL cullin 7 EMBV3_11515 TGCTCATGCTAGATGTCATGATCCTTGTCTACTTTTCCCGCCTCCTCCGCTCTGACTTCT Gene GeneID:100125601|TLCD1:NM_001105042:2_cdna Constitutive 0 NULL GeneID:100125601 19 GENE TLCD1 MGC151675 TLC domain containing 1 EMBV3_26598 CTCTTTTCTACCTTCCCATTCTTACCCCACTATATTCAAAGACCCCAGGGCTACATAGGG Gene GeneID:100126826|TRIM49:NM_001111262:23_cdna Constitutive 0 NULL GeneID:100126826 29 GENE TRIM49 RNF18 tripartite motif-containing 49 EMBV3_38998 CCTGCAATGTGCTCTATGCCTTTGATGTCAGCCGACTGTTTTTCCAATGACATCCACAAG Variant GeneID:541138|KLHDC3:NM_001014966:347_cdna 401^516 2 EMBV3_12726 GeneID:541138 23 GENE KLHDC3 NULL kelch domain containing 3 EMBV3_08393 GACAGCCTCACTAGAGGTCTGGCCGTAACCATCTCTGTGCAGTGTAAGAAAATGTCTACT Gene GeneID:281249|IL18:NM_174091:14_cdna Constitutive 1 NULL GeneID:281249 15 GENE IL18 NULL interleukin 18 (interferon-gamma-inducing factor) EMBV3_17946 CCATCTACTTCTCTCCAGCCAACAAGAAGCAAAATCCAAAGAAATATGAAGGTGGCCGTG Gene GeneID:281803|PDIA3:NM_174333:130_cdna Constitutive 0 NULL GeneID:281803 21 GENE PDIA3 GRP58 protein disulfide isomerase family A, member 3 EMBV3_19997 TCCAAATCCAACTATCAAGTGTTCCAAAAGACCTGGCTAAGAAGTTACATAAAGCTGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11493 TGACTGGCAGACTTCGCTGACCACGGGGGAGCCACGGTCTTTTCTTTCTTTATGCTCAGA Gene GeneID:511970|QRICH1:NM_001098015:148_cdna Constitutive 0 NULL GeneID:511970 22 GENE QRICH1 NULL glutamine-rich 1 EMBV3_02158 GACAAATGTTCCCGGCACTGCAAAAGTTCTGACATTCCGATTGCACATTTGAGGTTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00536 ACAGTTATTTACTTAATTAGGGAGGAGAGCCTGACAGTCCTAAAGCCAGGTGGGCTCAGC Gene BVT0102_218816 - 1 EMBV3_35326 GK000024.2:54093677-54154016 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143430 1 XLOC_087852 NonCoding TCONS_00143430 XLOC_087852 NonCoding NonCoding - 24:54128300-54128872 - TSS107641 572 1 0 0 0 0 0 0 0 0.00361932862881352 1.03404120611042e-05 0 0 4.00207710712808e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 6.05636701397549e-05 0.000357200995117115 1.02432631482987e-05 0 4.24353460898483e-05 0 0 noncoding 0 0 0 0 -0.243054763435519 0.17313588714274 -0.0241799640231156 0.783006927814959 GTGGGGGGTGGGTTGTTAAAGATTTGCCCTGAATAGTGGAGAGGATTTCTGTTCTCCCAGAGGCCGTGTATTTACTTCTTTTCTCTCTCATTTTCTTTCTTCATCCTCCCTTTCTCTTCCCCAAGGCAAGAACAGTTATTTACTTAATTAGGGAGGAGAGCCTGACAGTCCTAAAGCCAGGTGGGCTCAGCCCTGAGAATCCTTTTTAGACGGCCTCCCCCAGGGCGCTGCGGGTTCACTGTGAGTCCAGGTTCTCATCGGTGAGCTGGCAGGCGTGTCTGCCCTTCCACAGGCCCTGACAGGCCTCTGTTCTCTCAAAACCAGCTTCTTACCCTGTTCCCTGTTCCCGGGTGGAAAAGTCAGCTCGGCTGTTCACATGTGGCTACTTATCTTCAATTCACAGTGGGTGGGGCTCTGCCGGAGGTAGGCGGGGTAGGTCTCAGGAAAATGCTTTTCACTTTAAACCTAGCGTTAGTACTAATATAGTTTAGGATCCACATGTCTTCCGTCTACAGGGGATTTGAGCCATGGCCTTTGAGATTCAAAAAAAAGAAAAGAAAGCTTGGGGTGAC TCONS_00140600 . 5' 22586 TCONS_00140600 . 5' 22586 EMBV3_30653 CCACTGTTTCATGTTAGTGGTATAAATCACCACAAAAAATTACTTCCTAAGGTTATGAGC Gene BVV0102_044897 - 1 EMBV3_12501 GK000006.2:56256471-56817517 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22202 GGAAGAGAAGTTGTCCAAATACAAAGACAGGCAGCAGGAAGCCCCTGACCTCTTCCAGTG Variant GeneID:504854|CRELD1:NM_001014851:47_cdna 300^410 1 EMBV3_42216 GeneID:504854 22 GENE CRELD1 MGC134226 cysteine-rich with EGF-like domains 1 EMBV3_32652 GAAGTAAAGAAGATCAACAATGCTCACACCGGAGGAGGAGGACGGCCAGTGGAAGGAAGA Variant GeneID:512530|SEC13:NM_001075565:110_cdna 509^642 3 EMBV3_23312 GeneID:512530 22 GENE SEC13 NULL SEC13 homolog (S. cerevisiae) EMBV3_20082 GAGGTTTTCTGGATTGGCAAGATGTTCTGTTTGAATTATCTCCTCAGCTTGGTCCCATGC Gene BVV0102_121400 + 0 NULL GK000004.2:77862355-77873882 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08303 CAGCAAGGGGAGAGTTTCTGGTTTCTGTTGCCCAGTTCTGAGTGATCTGGAGTTGATCCT Gene BVV0102_401024 + 0 NULL GK000012.2:78064858-78283459 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21802 TGGCCGCTGAACTGCAGGACATGTGTGAAGATTACGCAGAAGCCGTGTTCACCTCAGAAT Gene GeneID:512933|LOC512933:XM_002695767:246_cdna Constitutive 0 NULL GeneID:512933 19 GENE LOC512933 NULL similar to Uncharacterized protein KIAA0753 EMBV3_22246 GGCCTCAGGTGGCCTTTATCTACAAGGATACAGGGTGAATGAGCAGACCCTTAGTGTCAA Gene GeneID:521717|LOC521717:XM_002689422:28_cdna Constitutive 0 NULL GeneID:521717 7 GENE LOC521717 NULL similar to CG31772 CG31772-PA EMBV3_36028 AGAGGAAGCTGAGTGACCAAGCCAACACCCTGGTGGACCTTTCCAAGATGCAGAATGTCA Gene GeneID:534180|KCNN3:XM_002685991:335_cdna Constitutive 0 NULL GeneID:534180 3 GENE KCNN3 NULL potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 EMBV3_18529 CAGACTATCTAGGAGCAAACAGTGTTGTGTATCTGTCAGTAGAAGGGCTGGTTTCATCTG Gene GeneID:509652|PPAT:NM_001102375:98_cdna Constitutive 0 NULL GeneID:509652 6 GENE PPAT MGC148403 phosphoribosyl pyrophosphate amidotransferase EMBV3_20654 CACCATTTCATTGTAAGCTTTTCTCTGCCTCTACTTTGCAAACAGTGCTCCAGACCAGTC Gene GeneID:539174|MTMR9:NM_001101187:20_cdna Constitutive 0 NULL GeneID:539174 8 GENE MTMR9 NULL myotubularin related protein 9 EMBV3_02404 TGGATAGTGTCCTCGGACTGGGGGCACTGGGGCTGACAATTTGGGCCATCTTTTCCACAA Gene GeneID:788725|LOC788725:XM_002692233:1484_cdna Constitutive 0 NULL GeneID:788725 13 GENE LOC788725 NULL similar to chromosome 20 open reading frame 141 EMBV3_38566 CTCATGGCTATTGACAGGGTTCCAAGAGAACAGATGGAATCACACAAGGCCTCTTAAGGC Gene BVV0102_070633 + 0 NULL GK000019.2:23124404-23139101 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31637 TTCAGGAGGCAGCCAGCCTGGAGACCAGGATTTCCAATGAAAACTACATTCCTCACGGGC Gene GeneID:539532|EXD2:XM_002690983:259_cdna Constitutive 0 NULL GeneID:539532 10 GENE EXD2 EXDL2 exonuclease 3'-5' domain containing 2 EMBV3_07472 ACGATGTTCTGCTTCTCTGTCAGTGGGGTGTTCAAGGAAGTGGAAGGAATTTCTCAGGGC Gene GeneID:615581|NXF3:NM_001078052:2_cdna Constitutive 0 NULL GeneID:615581 X GENE NXF3 NULL nuclear RNA export factor 3 EMBV3_41253 TTGAGGGTGACGAGGACGCCTCTCGCATGGAAGAAGTAGATTAGGAGTTTCTACCTGCAG Gene GeneID:767874|HSP90AB1:NM_001079637:377_cdna Constitutive 0 NULL GeneID:767874 23 GENE HSP90AB1 NULL heat shock 90kDa protein 1, beta EMBV3_17729 GACAGCAATGAAAAGCCACAAGTTGACCAAATGGTGGAGGAGAGTGAGGAACGGCTGACA Variant GeneID:507533|CRCP:NM_001077870:266_cdna 734^791 1 EMBV3_35594 GeneID:507533 25 GENE CRCP MGC142463 RCP9 CGRP receptor component EMBV3_09920 TGACGGTTGCATTTGCCACTTCATTTACTGTCTGCTGGACGCCCTACTATGTCCTTGGAA Gene GeneID:281798|GNRHR:NM_177514:11_cdna Constitutive 0 NULL GeneID:281798 6 GENE GNRHR NULL gonadotropin-releasing hormone receptor EMBV3_22597 TCCAGGAATTCTGCTGTTCAGGATTTGGGGATAGCATTTGGGAACTGGTGGAGCCAGGCA Gene GeneID:511492|C11H2ORF7:NM_001100338:7_cdna Constitutive 0 NULL GeneID:511492 11 GENE C11H2ORF7 NULL chromosome 2 open reading frame 7 ortholog EMBV3_38917 GAAGGTGACCAGGGAGCACATCCGGGAAATATTCTCCACCTTCGGAAGAGTTCGAAAGAT Gene GeneID:508834|LOC508834:XM_002688830:126_cdna Constitutive 0 NULL GeneID:508834 7 GENE LOC508834 NULL similar to ribonucleic acid binding protein S1 EMBV3_31988 TCCATGCCCAAGATCTCCAGGCCTAGAGAGGTGGAGCTTGGAGAGGCTGAAGAGAGATTC Variant GeneID:539847|ZNF383:NM_001102232:715_cdna 95^201 1 EMBV3_28302 GeneID:539847 18 GENE ZNF383 MGC160035 zinc finger protein 383 EMBV3_28410 ATCCTGAGCATGATCTTTATGGAGGGTGGTTGTGTCTCTGAGGAGAAGGTGTGGGAAGTG Gene GeneID:509805|MAGEA10:XM_002699648:143_cdna Constitutive 0 NULL GeneID:509805 X GENE MAGEA10 NULL melanoma antigen family A, 10 EMBV3_23471 TCAGAGACACCGATATGACCATCACCAGAGATGTATGAAAACTTCGTGGAGGAAGTAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41889 CAGGGCCAGTCACTCTCTTGTAAATAAAATCTCCCTGGAGCCATTTCTGGCAAATGACAC Gene BVV0102_396111 - 1 EMBV3_41057 GK000004.2:76606256-76705104 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11781 ACAGTCTCTTCCCTGCTACGCTGGAAGCAAATTGAGGGTGGGACTGGGTCTGTTTGTTCT Gene BVV0102_271115 - 1 EMBV3_25920 GK000023.2:25051795-25066914 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07628 GGACGTCGAGGCCGAATGGGTGGAGGTTCAAAGAGGATTAGCGATCTACGTGTGCTTTTT Gene GeneID:781337|LOC781337:XM_002691320:459_cdna Constitutive 0 NULL GeneID:781337 11 GENE LOC781337 NULL hypothetical LOC781337 EMBV3_27083 GTTCACAGTGGGGCATAAGAGTGGCAGGTAATGGGTCTGTAAGGGCGGACTGGAATGAAT Gene GeneID:508021|MGC166151:NM_001101892:98_cdna UTR3_Alt 2 NULL GeneID:508021 3 GENE MGC166151 NULL hypothetical LOC508021 EMBV3_19046 TTGATGACAGACACAAAAAGGAGAATGGCACCTCAGACGAGTCCTCCAGCGAACAGGCCG Gene GeneID:781063|TBX3:XM_002694588:669_cdna UTR3_Alt 2 NULL GeneID:781063 17 GENE TBX3 NULL T-box 3 EMBV3_05803 ACGGCCAAGGGAGCAGCTATCAGATTGGACTTGGAAACAATGTCAACAGAAGATTTGCTC Gene GeneID:100296421|LOC100296421:XM_002688329:200_cdna UTR3_Alt 2 NULL GeneID:100296421 6 GENE LOC100296421 NULL similar to UDP glucuronosyltransferase 2 family, polypeptide B17 EMBV3_03716 ACAGCGGAAGAATGAGGCCCTTGGAAGCAAGTAAAAGTACCTCGGTTATCTTTGGGTCCC Gene BVT0102_208240 - 1 EMBV3_25549 GK000001.2:128288219-128345226 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005171 TCONS_00005180 TCONS_00005170 TCONS_00005176 TCONS_00005174 TCONS_00005177 TCONS_00005168 TCONS_00005178 TCONS_00005173 TCONS_00005179 TCONS_00005172 TCONS_00005175 TCONS_00005169 1 XLOC_001198 Coding TCONS_00005168 XLOC_001198 Coding Coding RASA2 1:128342297-128390574 j TSS2554 5250 1 TCONS_00005168_4 441 17 0.891602452564421 1.79653559158332e-05 0.000136582014705365 1.03718105961803e-25 2.40354778615387e-11 1.57103343889097e-53 1.92474784500064e-12 0.000120795714649333 7.63121602290379e-05 2.14483279738514e-12 6.12730867522728e-31 9.3009882801398e-28 1.68536869858509e-05 3.91695900924241e-100 1.31927782155284e-05 1.85633346666074e-09 0.00321930570411093 0.000804851218499176 0.0014874471012114 1.65588284896117e-05 1.50143975584748e-05 2.00657399385298e-27 0.00137542313859068 4.99953335199275e-05 0.000653417211311781 7.77047455725828e-17 5.49631862906518e-81 1.92129416693208e-19 0.00056868411229698 4.1154005536954e-05 3.23937393506275e-05 XM_005201878.1 RASA2 PREDICTED: Bos taurus RAS p21 protein activator 2 (RASA2), 0.0 8711 100.00 0.919809523809524 XM_005247688.1 RASA2 PREDICTED: Homo sapiens RAS p21 protein activator 2 (RASA2), 0.0 5781 86.65 0.919809523809524 TCONS_00005168_4 sp|Q15283|RASA2_HUMAN RASA2_HUMAN Ras GTPase-activating protein 2; 0.0 863 97.48 0.988662131519274 3 coding 0 0 0 0 -0.135565622744796 0.387882312144652 0.00166804293505265 0.980014456483051 ATAAGCCAAAACAAAAACAATGTGTAAAATACTGTGAACGAAGGACTTAGAAGACAAGTGTTTAGGATCGACTTGTGGAACAATGGAAACCTGGTCCAAGATGTTTTCCTCGGTGAAATCAAGGTTCCTGTGAATGTATTAAGAAATGATGCCTCTCACCAAGCCTGGTACTTGCTACAACCAAGAGACAATGGAAACAAGTCATCTAAAACTGATGACCTGGGGTCCCTTCGATTGAATATATGTTATACAGAAGACTATGTGCTTCCTTCAGAGTACTATGGTCCTTTGAAAACACTGCTGCTAAAATCACCAGATGTTCAGCCAATATCTGCCTCAGCTGCTTACATTTTGGGTGAAATATGTCGAGATAAAAATGATGCTGTTTTGCCCCTTGTACGACTGCTGCTCCACCATGATAAACTTGTTCCTTTTGCCACTGCAGTGGCGGAACTAGACTTGAAGGAAACACAAGATGCAAACACAATTTTTAGAGGAAACTCCTTGGCTACCCGATGCCTGGATGAGATGATGAAAATAGTGGGAGGGCACTACCTGAAAGTAACATTAAAACCTATTCTAGATGAGATATGTGAATCCTCAAAATCCTGTGAAATTGATCCTATTAAATTGAAAGAGGGAGATAATGTAGAAAATAATAAGGAGAATCTGCGCTACTATGTAGACAAGTTGTTCAGTACAATTGTCAAATCAAGTATGAGCTGCCCCACTGTAATGTGTGATATCTTTTATTCTCTAAGGCAAATGGCTACTCAAAGATTTCCTAATGACCCTCATGTTCAGTATTCTGCAGTGAGCAGCTTTGTATTTCTTCGTTTCTTTGCTGTAGCAGTAGTATCACCTCATACTTTTCATTTGCGACCTCATCATCCAGATCCACAGACAATCAGAACATTAACTCTCATCTCAAAAACTATTCAGACTTTGGGAAGCTGGGGGAGTCTGTCCAAAAGCAAGTCAAGTTTCAAAGAGACATTCATGTGTGAATTTTTCAAAATGTTTCAAGAAGAAGGATATATTATGGCAGTTAAAAAGTTCTTGGATGAAATTTCATCTACTGAAACTAAAGAGTCCAGTGGTACAAGTGAGCCTGTGCACCTGAAAGAAGGTGAGATGTATAAAAGAGCTCAGGGAAGAACTCGGATTGGAAAAAAGAATTTCAAGAAACGGTGGTTCTGCTTAACAAGCAGAGAGCTCACCTACCACAAGCAGCCAGGTAGCAAAGATGCAATTTACACAATTCCAGTGAAAAACATTCTTGCTGTGGAAAAACTGGAAGAGAGCTCTTTCAACAAGAAAAATATGTTCCAAGTGATACACACGGAGAAACCACTCTATGTCCAGGCAAATAATTGTGTAGAAGCTAATGAATGGATAGATGTGCTCTGCAGGGTGAGCCGATGCAATCAGAACAGACTCAGCTCTTATCACCCCTCCGCATATCTAAACGGAAACTGGCTCTGCTGTCTGGAGACTAGTGAAAATGCTCTCGGCTGTAAGCCGTGTACTGCAGGTGTCCCTGCAGACATACAAATAGATATTGACGAAGACAGAGAAACAGAAAGAATTTACTCCCTTTTCACCCTCAGTTTACTTAAGCTGCATAAAATGGAAGAGGCTTGTGGAACTATAGCAGTCTATCAAGGACCACAGAAAGAGCCTGATGACTATTCCAACTTTGTAATTGAGGATTCTGTAACAACCTTCAAGACAATTCAACAAATAAAAAGTGTCATAGAGAAGCTAGATGAACCTCATGAAAAGTATAGGAAGAAAAGATCAAGTAGTGCAAAATACGGGAGCAAGGAAAATCCAATCGGGAAAATATTTTAGAGTTTGGCCAATTGATTCGGAAGAACTGGAAGATATTTTAGTTGGAGTTTTTCAATTCATCGTGTATTTTGTTCATAGTATTTAAGAATGAACATCGGCTTCACTGTCATCTGCATTCACATTGTATTTAATATTTAATAATTGAAACTAACTGTTTGGAAATTCTGGTGTGATGTTTCACTAGAGAATTTAAAACCCAGGATTCCCTTCATATCTTATGTGTCGAAAGCCATGTTTCTGCAACTTCTTTTTAATAGAAAGACTCTTCCTAAAGAAGCTTTATAACAAAAGGAGAACTCCTCCATAGCAAGAAACCATCTCTTCTTGTAACACTCCATGTTCTGTGGACTTTTCACTACCATTAGTGCCTGCTCTATACTGCCAACATTGTGTTTTACTAGAAAATTTCAATCCATGACTATTCAGAGCTTTCCGTTTAGTTCATCTAGACCCTTCCTCTTCAAAAAAAAACAAAAAAGATCTCCTTTGGCCCATCGGTCATTACAGATTACATTAGAGACAGTGACAGAAACTTTAGAAACTACCACAGTATCCTTGGAAGTTGGTGGACCCTTTTACCCATTTAGAGATGCAAACAGCTCAGATAGGAGAAATCAGGGAACATGTACTGTTGTCTGCATCTTGTTTACATGTGGGATGAGTGATGGCAGATGAAATACAACCAGACCACTAAATTTTTTTTCACCGTTTAAACATCAGGTACTCATATTTTTGATTTGAGAGTTCAGGCTGTTGTGACTTCTAAGGACTTCACTTCTGAAAAAGAAGAGAAAGTAAACAGTGGGGACAGGTGGTGGTACAATCACTTGACTTCACTCGTTGCCCCGTCATTATAAGGGCCGCCACCACGGGACGCCCTCCTCCCCACGTGAGGGTGAGATCCAACTCGAGGACAGTCACTCGGTGCACTTTACTCATCTGGGCGACCCCAGATTATGCTTCAGATACTCCATGGTATCTAACCTTTATGATCAGTTGAATGATCAGTGTTTAAGTCTAGAAATAATGCTTTCTTGAAAATGTTTATATTTCACTGCTGTTTCCTTATTGCCTGCTAGCCAAATGGAATTGGGCAAGCAACTGTTTGAATCCTGTTTTTCCCTAATAATTTACCTTTATCCTAAAAATCACAACTGTAAATAAGCAGTCGAAGCAAGTGGCCACCTTGAAGTTAAGAGGAATACACTTCGCTTCATCAGTATTAAAAACCATGGTACTCTTACTACGTGTTTTTAAATTCAAAACATTTTCTAAATGTGGTACTTTGAACCTTGGAGTATTTTACACGTTTCTGTTTAAAACTGTGACTTATTAATGTAAGTCTAGCTAGTAGTGCTTTTTTGTTTCCCTGAACATAAGCTATATTTCAAGATACACTTTGCCAATTATGTTATTGGTGAGTGATTGTTTTTAAATTATAACGTTACTGGGTAATTATTTTTAAAGACCATTGGCAAACAATCAAAGTTCCATAAATGATTACAACTAAGCAATGTATTTCTCTAAAGGACTTGTAAAAATCAGTTAGTTTTATTTAAGGATCAGTCCTAGTCTGCATTAAGTTATTCCTGGCCCATTTTAAAGACAAGTTTGAAAAAGACTTTTAAATTTTATGAATTTGTAGATTCCATAAACTCCACTGATTAATCAGTGTGAAAGAATTTTACTGTTTTAATCCATTTCTCACTGTTGAATTTTATTCAGATTGAAATTTCCTTTTCAGAGTCTCTGAATGTACGCCTGGAAAGGCCATGTGAGCATTGCCAGGTACCACTCATTGCTCTCCAGTGGCTTCTTGACTTATATTCTGACATTTCTAATATCAAGCCCTTGGTAACATAATACCAAGTTATGACTGTTTTTAAAGATCACAGTGTTCTCAAAGGGACCAAGGCTGTCTGAATATGTAACTCAGAATTTGAAAAGAATTCAGTTACTAGTTCTTTTCTTCACTTTTAAACAGCCAGTTTGACTGGAATTAACCACCTTGGCACAGCCTAAAAACAAGTAATGTGAAATGAAATTTTCTTTGAAAGTCTTCTGAAATAAGAGACCATGTCAGTGGGACCCAAAGATAACCGAGGTACTTTTACTTGCTTCCAAGGGCCTCATTCTTCCGCTGTTACTTATGAGTACTTTGATTTTTACTACCTGATCTGCTTTCTCTCCCTTTTCCAAACTTGAAAAATACATGGCAGCTCACTTTACCCTAACGCCGTGAAAACCCCAAGAAAGCAAGCAAAGGATGATCCGGAGGAACTCTTGCCATAAATGCCGACTTGGTTCTTAGTTTAGCCATTTCCATCATTTGAAATTATGGTGGCGTGTCGCTTGTTTTGTTGTCATCGTTTGTTCTTTGTTTAGCTTTGTTTTTTAATATTCATTTAATATGATAATAGGCAATAGCAACATTTTTTTACTCCCAGGAATATAATTTATCAAATTGAACTATTTTCTTTGCCAAAGAAGTATGTTTATAATATCACGGGTAATGATTTAAGTGTCAAAACAAGGCTTTGCTTATTGTACAAAAAAAAAAAAAGGGTGATGAATGATGTAGCTTTTGTTTCTGTTTCTGAAGCCTAATTTCATTCATTTTTCAGAAAGGCTTATTCATGCCAGGTTTTAGAAGACAGATGTCATTTTTAAGTAAAAGCACCTTTAATTTGTTCTAACGGTACATCCTGTAAAGACAAAAAGCCTCAAAGCCTTTTAGGTGTCCTTACAGTATGTGAAAACTACAGGACTCATTCTAAATTACCAGTCTCGATTGATACTATCTGCTTCCATTTTTATTAACTTGGAAATTAATATGTTGCTAGTAAATATTGGTTTTTACAGTGTCCAGTTTGAAAATGTAAGTTATCAAAACTTAATGTAGTGAATTTGTGTAACCATGTTGTACTGTTGAGAATGTATTTTTATTTAAATTTTATTTTCTTATCAAGAGTATTATAAAAATTAAAAACTTTTGTAGCTGTTGCTTGGAAATAACAAATAAATTACAAGAAGCCTGTCCACTCTCTGCGTGACCTCACTTTCTCACTGATGTGAGAATCTCTGCTCATTAGAATGACCATAACTCACCTATTAGGAAGGGAATAGCAAGTGAGGAGTCCTCAATGACAGAAGAGCAAGCCATCTGAAAAGGGTGCAGAAACCTCCTGCGGCGTTTATCTGGGCTGGTTGTTTGGACCGAGGCCCTTGTTTGTTCATTCAGCAGACTTGTCTGGAGGACCTGCCGTGTGCAGGACCCGTCGTTCCCGAGAGCCGTGCACGTCCAGTATGTGGGGGTATGTTCCACTCATCTGAGTCCACAGTTTAGAGCTGACTTGTGCCCCCAGTGAAAGGAGCCAGGATCTTCCCCATTACTAC EMBV3_13317 ATGGTATTAGAAGACAAGAGAATTTTGAAGGTAGCAGATGTCCTTCAATTTTCCGTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06270 AGTGGAGGGTAGTACTTTTGAGCCACCTGGCTTGGTTCCAGTGACAGAAGCAAGCGTTAT Variant GeneID:507986|MOCS2:NM_001014867:64_cdna 325^603 5 EMBV3_11164 GeneID:507986 20 GENE MOCS2 NULL molybdenum cofactor synthesis 2 EMBV3_09347 TTACTTGAGGCCCTTGGACTGGAAGGAGACCTCCTGGGACTCGAAGATCCGCTGGGTGAA Gene BVV0102_238390 + 0 NULL GK000021.2:33766712-33796381 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27100 TCCAGGTGGCACCCGAAAATGCTGGAATTTTCATGGCAGGTGCCGCCATAAATGCTTCAA Gene GeneID:786992|DEFB123:NM_001102343:1396_cdna Constitutive 0 NULL GeneID:786992 13 GENE DEFB123 NULL defensin, beta 123 EMBV3_23598 TCCGCTGAGTGACCCTTACAAGTCCTTTTTGATCCTGAAGTGGAATAGGTGCCGCTGTTG Gene GeneID:613899|UQCRH:NM_001034745:286_cdna Constitutive 0 NULL GeneID:613899 3 GENE UQCRH MGC127994 ubiquinol-cytochrome c reductase hinge protein EMBV3_15767 ATGAAGACTACAAGCTTCTTGGTCCAGGTGGTGGGCCTTCTTGTTCTTGGGACTCTGGTG Gene GeneID:407163|bTrappin-5:XM_002692473:541_cdna Constitutive 0 NULL GeneID:407163 13 GENE bTrappin-5 NULL trappin 5 EMBV3_07195 ATGCACCCAACACGGGAGCACCACAGTACATAAGACAAATGCTAACAAGTATGAAAGGAG Gene BVV0102_296512 + 0 NULL GK000030.2:24739269-24958420 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00010367 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00022064 TCONS_00198662 TCONS_00073692 TCONS_00056147 TCONS_00116799 TCONS_00250553 TCONS_00019991 TCONS_00098385 TCONS_00189806 TCONS_00165811 TCONS_00032587 TCONS_00197973 TCONS_00141355 TCONS_00031938 TCONS_00207228 TCONS_00250544 TCONS_00239410 TCONS_00141464 TCONS_00177994 25 XLOC_131641 XLOC_142855 XLOC_005918 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_012735 XLOC_120316 XLOC_045454 XLOC_033950 XLOC_070965 XLOC_153496 XLOC_010669 XLOC_058631 XLOC_115843 XLOC_100651 XLOC_018827 XLOC_119632 XLOC_085783 XLOC_018183 XLOC_125746 XLOC_153487 XLOC_146076 XLOC_085892 XLOC_107767 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_17668 TTCCTCGAATGCAACTCCATGAGGGGAGACCCAAACAAAAAAGGCATCGCTGCAGAAACC Gene GeneID:539275|CHD9:XM_002694778:577_cdna UTR3_Alt 2 NULL GeneID:539275 18 GENE CHD9 NULL chromodomain helicase DNA binding protein 9 EMBV3_02980 TTTTTCTATATTATAAACATAAAATAATAAGTAATGAGCACTTTCTACTCAAGCAATAAA Gene GeneID:615789|PRR16:XM_002688993:73_cdna Constitutive 0 NULL GeneID:615789 7 GENE PRR16 NULL proline rich 16 EMBV3_30622 GTAGCTACGTTAAACAGAACCTGCTCGAGAAAGGCACTTTGTATACACTTCACTGGCAGG Gene BVT0102_001579 - 0 NULL GK000017.2:19894621-20602271 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01278 GGCAATTGGTTTGAGGCAAAAAGGAGTTGTCCCTAGCTCACAGCGTTTCTATCAGCTTAC Gene GeneID:280895|PGR:XM_002692943:76_cdna Constitutive 0 NULL GeneID:280895 15 GENE PGR NULL progesterone receptor EMBV3_10485 GAGTGTCTGCCAGGACTGAACTAAGGGCCTCTGAGGCCAAGCTCTTTGGAGCTCCTTTCA Gene BVV0102_333802 + 1 EMBV3_03899 GK000015.2:45866756-45880614 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00064767 1 XLOC_039491 NonCoding TCONS_00064767 XLOC_039491 NonCoding NonCoding - 15:45868244-45868685 - TSS48510 441 1 TCONS_00064767_1 95 0.478458049886621 1 0 0 0 0 0 0.000128747241838413 0 0 0 0 0 0 0 0 0 1.11251934371548e-05 0 0 0 0.000471558115159165 0 6.88374337769926e-06 0 0 0 0 3.19521823464797e-05 5.31442611595705e-05 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 4e-52 208 81.90 0.494331065759637 0 noncoding 0 0 0 0 0.00201108113121591 0.991321818809484 0.0574722040342341 0.255736711829526 ACAACTGAAGAGACTTAGCAGTAACAGCAGCATACATTCAATACTAGAGGCTTTCCAGAGGGCACAGTGGTAAAGAATCTGCCTGCCAATCCAGGAAATGAAAGAGATGCGGGTTCGATCCCTGGTTGGGAGCATCCCCTGGAGTAGAAAATGGCAGCTCACTCCAGTAATTTTGCCTGGGAAACTCTATGGACAGAGGAGCCTGATGGGCTACAGTCCATGGGGCCATAAAGAGTTAGACAAGACTGAGCATGGATGCACACACATATATTCAACACTAATGGCATGTGGAGGATTACTGGAGACTCAGAACGAAGCAAGAGGCCTTATTGTACTATGTGTCCTTGGGCTGCTTCCAGGGCTGCCCTTGTCCACATGCCTCTGAAAGGAGCTCCAAAGAGCTTGGCCTCAGAGGCCCTTAGTTCAGTCCTGGCAGACACT TCONS_00061448 . 5' 1426 TCONS_00061448 . 5' 1426 EMBV3_40185 GGTCAGAGCCTGTCCAGAACTCGCACATGTTTCAGGGTGTTTATGGCCTCATGCTTTTGC Gene GeneID:280981|PLIN2:NM_173980:2_cdna Constitutive 0 NULL GeneID:280981 8 GENE PLIN2 ADFP MGC127212 perilipin 2 EMBV3_13262 AAATGCCACAGGAAAAGAGCCCTGGATACAGCTAGAACGCAGTATTTCACCCACCAGGAG Gene GeneID:509393|MGC166084:NM_001101912:97_cdna Constitutive 0 NULL GeneID:509393 10 GENE MGC166084 NULL hypothetical LOC509393 EMBV3_03433 ATCTTTCCAGTGTGGCTGAATCATGGAATGGGTCCTATGGATCTACTCTGAGACAGGTAC Variant GeneID:613714|C23H6ORF105:NM_001037621:232_cdna 620^735 1 EMBV3_12771 GeneID:613714 23 GENE C23H6ORF105 MGC128787 chromosome 6 open reading frame 105 ortholog EMBV3_20191 GGGGAAGCGAATGCGAATCTGTAAGATAGCTAACAGTGCACTTAACGGAAAGGGGCGTCT Gene GeneID:529211|LOC529211:XM_002700335:74_cdna Constitutive 0 NULL GeneID:529211 X GENE LOC529211 NULL similar to aristaless related homeobox gene (Drosophila) EMBV3_10156 AGATTGAGCAACACTGACCTCACGTTTCCAGATGTCAGCAATCAGCCAAAAGTGAAGACC Gene BVT0102_069023 + 0 NULL GK000030.2:10983419-11789857 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243738 TCONS_00243740 TCONS_00243743 TCONS_00243741 TCONS_00243739 TCONS_00243744 TCONS_00243742 1 XLOC_150243 NonCoding TCONS_00243738 XLOC_150243 NonCoding NonCoding - X:11649126-11709590 - TSS183316 1565 2 TCONS_00243738_2 42 0.332907348242811 3 0.974166018887584 0.000289210714902746 0.000230799824864868 0.000248252776483837 0.000214401245476342 0.00023840700172855 8.89457861501062e-22 3.98916552910633e-08 2.35134036124959e-09 0.000431683974293657 1.24795269686363e-21 0 0 6.65501630067931e-06 8.25263950374883e-05 5.99325971617677e-13 0 0 0 0.000432171066207505 0.000296985600681566 0.000109274775465601 0 0 0 0.000130009234651381 7.6274314156351e-05 0.000222408664146756 4.75138975306819e-13 0 0 0 noncoding 0 0 0 0 -0.736284854558209 0.051639305710634 -0.0300238966875082 0.55325789720607 TGGCCCTCCTTGAGAACTCTAGAGCTGATACTGCCCTTCCAGATTATTCCAGAGAGAAGCAAACAGGCTGAGCCTTTATATCTTCACAATGATCAGTAATTTGATGTAGGCTGCCAAAAGTACGTGAATCTTGGGTGGGGCAATATCTTCCAGCTGAGGCAATCTCCAAAGAGGGCTGACAACAGAGTGCTAGTCAGGGGAAAGTTCATTCCTGAAGGGGCATTCTAGGAGAAGCATCATGGCCTCTGCTATATAAATCTAACAGAACAGAAATAGTGGTCACCCACCAATGGGTACAAAATTTATTTCTCCATTGTTTCAGAGAGGTGTAAGTTGAAAATTTCATCTGCCCACATCCATCCAACAACTGGTTTCTTCCTCTCCTCTCTCGAAAATTTAAAAGATTGAGCAACACTGACCTCACGTTTCCAGATGTCAGCAATCAGCCAAAAGTGAAGACCAGATACTAAAGAGAGATGAGGTTCTGCCAAACAGCATGGAATAGAGCACAGGATGGGGTGAGGATAGTCTGCCATGAACACAACGAATAAGAGGATGCTGTACTTGAAGAGAATTTAAAAACAATCAGACTAAAAATTAGTCAACTTTTACTATCACCATATGTCAGCATTTCTGAACATTGTTGGTGATAAAATACTCTTCCTGTTGTGGCTGGCTACTCCCATGGTCCCTTCTACCTTACTATTTTCACTGCTTTTTTCCCCTTATTTTTCTAAGTAAATTGACAAAAAGCTTATAATCATAAACACAAAACTCCAACTCTTCTGCCATTTGATAACTACGTGACCTTAGGCAACTCATTTAACATCTCTGTAGGTATATCGATAGCACGCACTTTACAGATACATGTGAGAAATTAATGAGTTGATTTTTATTGTGCTTATGAACACATATCCTCTTAATGTATTATAATTATTATAATTATCATTCCTTTAGGGATTTGATGGTTACTTTTTAAAACAAGTACAATAATTCTAAGATTTTATTAATTTGTAATTCCAAATTGCAATAGTATTTGTTATATTTGCACTGCTTCTGGATATAATCAAACAACTCAGGCTTAAAATAGAAGAAACTGCTCTTTTATATATTTTACTAAACTCTGTATTAAAACAGGAACCAATGAAAAGAGACTGATTTTATAGAAAATCTTGATTTGTGAATAGGAGAATGTTACTTATTTATTGAATGTCTACTATATATTAGGTACTGTGAATGATACCAAGGTGTGAAATATCTCTACCCTTACAATCTAGTGGATGAGAATAAATCAATACCAAGACCTGTATATACACAAAAAAATTCTCCTATTTGACCATGGAAGATATCATTAATTGATCACAATGCTATTTCTAAATATTAATGGCTTAATGGTCCTTGTGAGTGTAAAACCTCAAGTAACCATCATCTGTCTCTGGAAGTTGGTAGTTAAAATCAAATCTACTTGCTGTCAAGGTCAAGATGATACCTAACTGTTAAATGAATAATCTGAGCAGCAGGAAATCATATTAAAGGGATTAAAGAGTAAAACTTTAAAAAAAGAG TCONS_00243745 s 5' 242204 TCONS_00243745 s 5' 302667 EMBV3_19973 GGGTCCCAAATGAATTAGACCACTAAACGGTTCAGTCTCCTAAAGGTAATTTTTCCACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13604 GTTATGTCACCAAAAGTATGCTGGGTGCTGGTCACAGTCCCCTATGTTTACAGTGCCTCC Gene GeneID:528502|LOC528502:XM_002693652:239_cdna Constitutive 0 NULL GeneID:528502 15 GENE LOC528502 NULL similar to olfactory receptor 1056 EMBV3_12284 CACGAACATCATGACAGCAAGGGTGTGTGCCTGGATGGTTGTAGGATGCTATGTCTTTGG Gene GeneID:515045|LOC515045:XM_002693799:118_cdna Constitutive 0 NULL GeneID:515045 15 GENE LOC515045 NULL similar to Olfactory receptor 5B12 (Olfactory receptor OR11-241) EMBV3_15108 AGATGCTGTTCCCTTCTCATCCTGTGCTAACTTTCTGGCATCTGGCACTGTGTGCTCTCA Gene GeneID:534423|C9H12orf49:NM_001076023:240_cdna Constitutive 0 NULL GeneID:534423 17 GENE C9H12orf49 C12orf49 MGC139665 chromosome 12 open reading frame 49 ortholog EMBV3_01302 TACACGGTGCTGATTGCCGTCCAACTGTGTACATGTTTGTTGGGATGGCTGTCCCGTATT Gene BVV0102_242813 + 0 NULL GK000012.2:32952533-33114058 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035125 TCONS_00035120 TCONS_00035124 TCONS_00035121 TCONS_00035123 1 XLOC_020835 Coding TCONS_00035121 XLOC_020835 Coding Coding USP12 12:32892851-32955473 j TSS25805 4272 1 TCONS_00035121_1 341 0.0529026217228464 8 0.931907826447997 0.000342981360599267 0.000499466475291648 0.000216678528276604 0.000123567607209615 0.000224046313966325 5.08383420774836e-05 0.000232818480221084 0.000434912340734974 3.40129465522818e-10 0.000400929381615457 0.000108962842745907 6.64473264580353e-05 3.05855696991873e-05 0.000548425545543793 8.54089465056322e-10 0.00450668289992572 3.78901970650218e-08 0.00457940474728668 0.00039131854304368 0.000134401324959046 7.47062753230222e-05 0.000420324759654741 0.00238263975861674 0.0015705405777481 2.95914554079967e-07 0.000750533486999169 1.1857498865823e-07 0.00101581357224899 0.000297230209153499 0.000671157332479434 XM_005213781.1 USP12 PREDICTED: Bos taurus ubiquitin specific peptidase 12 (USP12), 0.0 6282 100.00 0.815074906367041 NM_182488.3 USP12 Homo sapiens ubiquitin specific peptidase 12 (USP12), mRNA. 0.0 3164 80.65 0.815543071161049 TCONS_00035121_1 sp|A5D9H7|UBP12_BOVIN UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12; 0.0 700 92.41 0.997067448680352 2 coding 0 0 1 1 0.0438210532554996 0.734008904147609 -0.0234763831438661 0.680784576778846 AGCGGCAGCGGCGGCTGAGCAGGCTTGGTGCGTGGGTCCGCGGCGGCTCGGGGTCGGCCCGCGGTGCGAGCGGGCGGCCCGGCTGCCTCCCTCTCCGCCCGCCGCCGCCGCCGCGATTCGGTGGAAGATGGCGCTGTGCGGATGGAAATTCTAATGACGGTCTCCAAACTCGCCTCCATCTGTACCATGGGCGCCAATGCCTCGGCATTAGAGAAAGAGATTGGTCCAGAACAGTTTCCAGTCAACGAGCACTATTTCGGATTAGTCAATTTTGGGAATACCTGCTACTGCAATTCAGTTCTTCAGGCACTTTACTTCTGTCGTCCATTTCGGGAAAAAGTTCTCGCGTATAAGAGTCAGCCCCGGAAGAAGGAGAGCCTTCTCACGTGCTTAGCAGACCTCTTCCACAGCATCGCCACCCAGAAGAAGAAGGTTGGAGTCATACCTCCTAAGAAGTTCATAACAAGATTGCGGAAAGAAAATGAGCTCTTTGACAACTACATGCAGCAAGATGCCCACGAATTCCTAAACTACCTACTAAACACCATTGCTGATATTTTACAAGAAGAGAGAAAGCAGGAGAAACAAAATGGTCGTTTGCCTAACGGTAACATCGACAGTGAAAATAACAGCACACCAGACCCAACATGGGTTCATGAGATCTTTCAGGGAACACTGACTAATGAAACCAGGTGTCTTACTTGTGAAACTATAAGCAGCAAAGATGAAGATTTTTTAGACCTTTCTGTTGACGTGGAACAAAACACATCAATTACTCACTGCTTAAGGATGAAAGTGAAAAAGCTGCCCATGATTCTAGCTCTGCATCTGAAAAGATTTAAGTATATGGATCAACTTCATCGATACACAAAACTTTCTTACCGGGTGGTTTTTCCTTTAGAACTTCGTCTGTTTAACACTTCAGGCGATGCGACCAATCCTGACAGAATGTACGACCTCGTGGCCGTCGTGGTTCACTGTGGAAGTGGTCCCAATCGAGGCCATTATATTGCAATAGTTAAGAGTCATGATTTTTGGTTGTTGTTTGATGACGACATTGTAGAAAAAATAGATGCACAAGCTATTGAAGAATTCTACGGGTTAACATCAGATATCTCGAAGAACTCTGAGTCTGGCTACATCCTTTTCTATCAGTCCCGGGACTGAGGGAACCGCAGTGAAGAGAGACTTCTGCATCATTCTTCTCTGGTTATTTGGGAAAGGATCAAGCACCGATTTTTCCAAGAAAAGAGAACTGCAGGGAGCTCAGGGGGGCAGCAGCACACTTTGCACACAATAAAGCAAAGACCGTGGGTTAACACGCTCTTCCTATCCTGGTAGTTGATTGATTCGCTCAGGTATCATGCTGTCTGTGCAACTCTGCACAAGGCAGTGAAATCAGAGATACCAGCTCCTCTTGTAAAACAGCCTTCCAGTAACCAACATGCATTTTCTCTTCCTTCATTGCACCGGTAGTGATTGAGCTCCTTGGGGGTGCAGCAGAGAAAACGGGAGTCTGTGCGAGGTTATACTGACGATGGCAGGAGGTGATGCTGAACACGCCGCACACGCGCGTGCCTGGGTTGGACACGTAGAGAGAGAACACTGGGTAGTCTTTTCGAGCGTAAACCGGAAATGCTTTTTGGGCCCAACACTTGGAGTCGCCTTCCTGATGTAAAGAGACTTAACACATACTAGAATCCAGTGTCAGGAAGGCAAATAACGTTTGCTTCTCTGAAGAAGCTTATAATCATATACAGTATATGTATATCTAGGGAACAATTGGTCAAAAGTGGCTTTTTGTTTCCCCAAGGGGAAAGACTGGCTTTGTAATTATAATTTTTTTCCTTATTTATTTTACTTAAAACTGGTAGAGTCTAAGTATTGTATGAAGTGCCCATGATTCTGTTGGTAAATTTGAGCATATTTTTATTAGTTTTTGTCAGTTTAATGAATCCTTTCGTTTGTTTCTATTTTTAAGGTGAATTTTTAAACTATTTTAAATCATAAGTTACCCTAAGAAAAATTGCAGTGAGAGAAGGTAAATTATTCTTTTTCCAGGAGGAACTGATATCTCTGGCTCTAAATATTTGTTCCTAGTTGTAAGTTTTATTCAGCTTTAATTTCAGTAAAATTTAAAAATAATCAAAAAATTCCCTATTGTTGTGGAATGATGGAAGAAATCCTGGTGTGGTAGTGGTGTGCTAGTCTTGAGGGTTCTTCAGTACTCTGTTTCAGGCTGAGGTCACGTTTGGAAAACTCATGTCACAGCAGTTACCTTATTTTCAGATGTTCTTTATTCTGGAAAGAAGTGACCATCCCAACCCCAGCCTTCCTGGGGAGCTGACAGACCTTTTGAGGAGTGCATTAATGAGGTCAACCAGGAGTACTTTGAAAGCAAGTCCTTTTTCCCCCCCTTCCACCTTTGCAGATCTTACTGGAAGAGTGTTTAGAAATTTAACTTTGTGTTTGTAAAGACTTCATTCTGTTGGGAGTTTCAAGAAGTGACATGCGTGATGTAAGATGTATGTAAACCATTGCAGTTGACACTTTCCTATACATCAGTAAGTTGTTTGACAGTGGCCGAATGTAACTTGCAGAAAGTAATTGAATATATATTCAAAATAATAGCAATCAGGTCTTAGATGTTCTTTATTCAAGTCTTTTTAAGGCAGTAATCTTTTTTTTTAATTGCTGTAATTTTCTAAAGTTATTTTACTAATACTGTTGAATCTGAAAAAAAAAAAGCAACAAAGAAGAATGTTTTTGTCTGCTGCTATTATTAACATTTATTATCTGTATCTTTTAGCTCAGGAAATGACTTCACCTGTTCGTTCCATGAATAGATCTTTAACAGGGTCACTTAGCTAATTGGACTGTTGAAACAAATGTGCCAGGAGAAAATGATGGTGTCTTCTGACAGATTGCTTTTGCAGATAACAGTTTCTAAAGCCTTACCCCTGGCTGGGATGGTTTCGTACAAATTACATGGCCTGCCCAATCTACCAGTGTGGCTCAAGAGAATCAACCAAGAATGTGGGCAAGGTCAGAGCTCTGGAGGTGCATACATTTTTTTTGCTTTGAGGGCTTCAGCCAAATCGTCTTGTAATTTAAAGCTGAAGGTCTGCAGCTTTCAGTCCAGAGACGAGGAGTAACGTGAAGCTGAACCAGCTTTAACTTGCACTGGTCCGCAGCATGTAGAAGAAAGATAGATGAAGTCATTTGCATAAAGGTACAGCGTTGGGATACTGTGTTGTGTTTGTAAACTTTACATTTTGCATTAAAAAAAAAAAGTACAGTAAAGTAAAAGCCAAGGTTAAATTTTCTATGAAAGCAAGTTCTCACATTTTTCTTGAGTTCCATGGTAGTCGCACACTGTTCACATCTATACCCTGTTTAATAGGACGACCTGTCAGGGGCAGGACAATGGCATGATGGTTCTCCATTCACTTTGTCCTCTTAAGTGCAGCTGCATCTACGTGCAATGTCTCGAAGCTTCTCAGAAACGCAGTATGCTTTAAAAACTCGAAGGGTTTAGGGCTGGGGGGAGAAATGCAGACAGAGAAAGAAAAGTGACGCGTCTAGAAAGCGACGTGAGGGTGTGTGTTGGCTGACCAACTGAAAGGAGCGGCGGGTTTCAGTTGTACACGGTGCTGATTGCCGTCCAACTGTGTACATGTTTGTTGGGATGGCTGTCCCGTATTTTGTGTTTTGGAATAAGAATTTCTATGAATTATCGTAACTGAAAGTAAGTATTCTAAATGAAGTCTCACTTCTAAGTCATATGGCTTCTGCCTTGGCAGCGGTACCTTTAGAAGCTGGCTGGAGACGGGAGCCCTGAGACTCTAGGCAGAGGGAGAAGGGGGGGTGTGTAATATATGGGTCATCGTCGCCTCTAACCATCCGTGTAGAGTTTTTTCCTTTCCTTGATGGCAGTAGAAAGACCTCACTTCCATAACATACTACTCTTGATACTTTCTTTAAAGCTACTTTTTCATTGAAGATTTCTCTCATGAGGTATTTAACCTGGGAGCCGGGAGGCTAAGGCGCTCAGGTCCTGGCTCTTCAGTGAATTTAACTGTGTGACCTTGGGCAAGTCACTTAACCTCTCTGTGCTTCAGTCTCCCTATCTTGTAAAATGGGAGTAATACCTACCTCACAGGGTTGTTGTGGGGATTAATTAGATACAATGTCTGTAAAGCATCTAAGGTTCTTGAAGAAGGCGCTATATAAATACAAAATAATATCTATTAAAGTTGGTCTATTTGTGCC EMBV3_06113 CCCAGTATGAAAAGGGATTGCACAAAGTGTGTAGATCCCGAACAAAGGAAGTGTTGGTTG Gene GeneID:520702|WDR63:NM_001099013:50_cdna UTR3_Alt 2 NULL GeneID:520702 3 GENE WDR63 MGC159783 WD repeat domain 63 EMBV3_31497 ATGATTGTGGATCCCCTGAGATCCGGCTTCCCAAGAGCACTTATTGACCCGTCATCAGGA Gene GeneID:617807|PSMF1:NM_001076478:1330_cdna Constitutive 3 NULL GeneID:617807 13 GENE PSMF1 NULL proteasome (prosome, macropain) inhibitor subunit 1 (PI31) EMBV3_38180 AGTATGATGAGAAGACAAACGAACTACTTGGTACTACAAGAAGTTCTCCATTCCTGACCT Variant GeneID:516908|DPCD:NM_001075745:147_cdna 178^436 4 EMBV3_26844 GeneID:516908 26 GENE DPCD MGC137186 RP11-529I10.4 deleted in primary ciliary dyskinesia homolog (mouse) EMBV3_32267 TTCCTATGACAGGGACTTAGCACATCTGGAATGCTCTTCCTCCCCCACTCACCTGTTAAC Gene GeneID:787112|PEAR1:NM_001101300:257_cdna Constitutive 0 NULL GeneID:787112 3 GENE PEAR1 NULL platelet endothelial aggregation receptor 1 EMBV3_27124 GCAATGACATCCGTGTGGCTGGCACTGGAGACCGGTGAGGGCGTGAATGACGTGCGGAAG Variant GeneID:514706|DBNL:NM_001098970:38_cdna 195^307 2 EMBV3_18897 GeneID:514706 22 GENE DBNL MGC166201 drebrin-like EMBV3_41120 CAAATCGACAATCTAAGGACAAATCATCAGTATTTAGCATTTACATGTGGCTTAATCAGA Variant GeneID:521470|TRAPPC6B:NM_001038134:23_cdna 413^496 4 EMBV3_38873 GeneID:521470 21 GENE TRAPPC6B MGC133693 trafficking protein particle complex 6B EMBV3_12274 TCACGTCCAGCCTGAAATAAAGTGTAGAATGAATAAAGGGTAGAATGACCTTTTAGGGGC Gene BVT0102_365283 + 1 EMBV3_06770 GK000002.2:9626709-9651630 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104442 TCONS_00104445 TCONS_00104441 TCONS_00104443 TCONS_00104444 1 XLOC_062381 Coding TCONS_00104445 XLOC_062381 Coding Coding ITGAV 2:9647266-9760283 j TSS77333 7694 1 TCONS_00104445_7 1048 0.0569274759552898 30 0.932186593048772 3.20927416977448e-10 5.42650915907698e-09 2.05414580198621e-08 2.02018046618651e-08 1.12459309054391e-11 2.60640897297365e-12 2.14473908370194e-05 4.98085978180589e-08 2.79090814140756e-09 2.29101374353045e-07 7.66568869173335e-09 2.69040757483859e-05 1.52742312157832e-09 1.10753421088995e-08 0.000173259065199983 0.00599259111063927 1.19605177682385e-07 0.00478825646446898 5.35959292904697e-06 6.77746925128538e-06 7.73979671841376e-10 2.86297224307827e-07 0.00188372745518012 0.00220308776690901 3.86029674183735e-09 8.3161467405191e-06 3.58924447128887e-07 7.09702191819676e-05 0.000233142134344753 0.000355023029758098 XM_005202252.1 ITGAV PREDICTED: Bos taurus integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) (ITGAV), transcript variant X1, 0.0 1.310e+04 100.00 0.943592409669873 NM_002210.4 ITGAV Homo sapiens integrin, alpha V (ITGAV), transcript variant 1, mRNA. 0.0 5191 88.40 0.525084481414089 TCONS_00104445_7 sp|P80746|ITAV_BOVIN ITAV_BOVIN Integrin alpha-V; 0.0 2153 99.24 0.999045801526718 3 coding 1 1 1 1 -0.00676116192248459 0.959839519431433 0.0126622417600662 0.829542921778484 CCCCACTTCCCGGGCGGCCGCTCAACAGCTCGGCCCTCCTTCCTCCCCCAGCGCTGTCCGGGACTCGCGGGGAAGCGAGCAGCTGGCAAGTTTCGGCGCGCGCAGGCGGCGGGCCGCGGGCTCCGTGCGCTCCGGGAGGGGTGGCCGCGGCTCCGGGCTCGGCGCCCCGCGCGCACTTCGACGATGGCTTCTCTGCCGCGGCGGCGACTGCGCCTTCGCCCCCGCCGCCTCCTGCTCCTTCTCCCCGGAATCCTGCTGCCTCTTTGCGGCGCCTTCAATCTAGATGTGGAGAGTCCTGCGGAGTACTCCGGCCCAGAGGGAAGTTATTTCGGCTTCGCGGTGGACTTCTTCGTGCCCAGCGCGTCTTCCAGGATGTTTCTTCTGGTGGGAGCGCCCAAAGCAAACACTACCCAGCCTGGGATTGTGGAAGGAGGGCAAGTCCTTAAGTGTGACTGGTCTTCTCACCGTAGGTGCCAGCCAATTGAGTTTGATGCCACAGGCAACAGAGATTATGCCAAGGATGATCCATTGGAGTTTAAGTCTCATCAGTGGTTTGGAGCATCTGTGAGGTCAAAACAGGATAAAATTTTGGCCTGTGCCCCACTGTATCACTGGAGGACTGAGATGAAGCAGGAAAGAGAGCCTGTGGGAACATGCTTTCTTCAGGACGGAACAAAGACTGTTGAGTATGCTCCATGCAGATCAAAAAATATTGATGCTGATGGACAGGGATTTTGTCAAGGAGGATTCAGCATTGATTTTACTAAAGCTGACAGAGTACTTCTTGGTGGTCCTGGTAGTTTTTATTGGCAAGGTCAACTCATTTCCGATCAAGTAGCAGAAATTGTATCTAAATATGACCCCAAAGTTTACAGCATCAAGTATAATAACCAGTTAGCAACCCGGACTGCACAAGCTATTTTTGATGACAGTTATTTGGGTTACTCGGTGGCCGTCGGAGATTTCAACGGTGATGGCATAGATGACTTCGTTTCAGGAGTTCCAAGAGCAGCGAGGACTTTGGGAATGGTTTATATTTATGATGGGAAAAACATGTCCTCCTTGCACAATTTTACTGGTGAACAGATGGCTGCATATTTTGGATTTTCTGTCGCTGCCACTGACATTAATGGGGATGATTACGCAGATGTGTTTATCGGCGCACCTCTCTTCATGGATCGCGGTTCTGATGGCAAACTCCAGGAGGTGGGGCAGGTCTCGGTGTCTCTGCAGAAAGCTTCGGGGGACTTCCAGACCATCAAGCTGAATGGTTTTGAGGTCTTTGCAAGGTTCGGCAGCGCCATAGCCCCTTTGGGAGATCTAGACCAGGATGGCTTCAATGATATTGCAATTGCTGCTCCATATGGGGGTGAAGATAAAAAAGGAATTGTTTATATTTTCAATGGAAGACCCACAGGCTTGAATGCAGTACCGTCTCAGATCCTTGAAGGGAAGTGGGCAGCTCGGAGCATGCCACCAAGCTTCGGCTATTCCATGAAAGGAGCCACGGATATAGACAAGAATGGATATCCAGACTTAATTGTAGGAGCTTTTGGTGTCGATAGAGCTGTATTATACAGGGCCAGACCAGTTATCACTGTAAATGCTGGCCTTGAAGTGTACCCTAGCATTTTAAATCAAGAAAATAAAACCTGCCCTCTGCCTGGGACAGATCTCAAAGTTTCCTGTTTTAATGTCAGGTTCTGCTTAAAGGCAGATGGCAAAGGAGCACTTCCTACGAAGCTTGACTTCCAGGTGGAGCTTCTTTTGGATAAACTCAAGCAGAAAGGAGCAATTCGACGAGCACTCTTTCTCCATAACAGGTCCCCGGGTCACTCCAAGAACATGACCATCTCAAGGGGGGGACAGATGCAGTGTGAGGAGCTGATCGCATATCTGCGGGATGAATCTGAATTTAGAGACAAACTCACTCCAATTACTATTTTTATGGAGTATTGGTTGGATTATAGAACAGCTGCTGATGCAACAGGGTTGCAACCTATTCTTAACCAATTTACTCCTGCCAATGTTAGTCGACAGGCTCATATTCTACTTGACTGTGGTGAAGACAATGTCTGTAAGCCCAAACTGGAGGTTTCTGTAGATAGTGATCAAAAGAAGATCTATATTGGGGACGACAACCCTCTGACCTTGATTGTTAAGGCTCAGAATCAGGGGGAAGGTGCCTATGAAGCCGAGCTCATCGTTTCCATCCCACTGCAGGCTGATTTCATCGGGGTTGTCCGTAACAGTGAAGCCTTAGCAAGACTTTCCTGTGCGTTTAAGACAGAAAACCAAACCCGCCAGGTGGTTTGTGACCTTGGAAACCCAATGAAGGCTGGAACTCAACTCTTAGCTGGTCTCCGTTTCAGTGTGCACCAGCAATCAGAGATGGATACGTCTGTGAAATTTGATTTACAAATTCAAAGCTCCAATCTTTTTGATAAAGTAAGCCCGGTTGTATCTTACAAAGTTGACCTTGCTGTTTTAGCTGCTGTTGAGATAAGAGGAGTCTCAAGTCCTGATCATATCTTTCTTCCGATTCCAAATTGGAAGTACAAAGAGAACCCTGAGACTGAAGAAGACGTTGGGCCAGTTGTTCAGCACATCTATGAGCTGAGAAACAACGGTCCGAGTTCATTCAGCAAGGCAATGCTACATCTTCAGTGGCCTTACAAATATAACAATAACACCTTGTTGTACATCCTTCAATATGATATTGATGGGCCAATGAACTGCACTTCAGATATGGAGATTAACCCTTTGAGAATTAAGATCTCAAATTCACAAACAAGTGAAAAGAATGATACAGTTGGTGGGCAAGGCGACCGGAACCATCTCATCACGAAGCGGGATCTCACCCTCAATGAAGGAGACGTTCACACTTTGGGTTGTGGAATTGCTGAATGCTTGAAGATTGTCTGCCAGGTGGGGCGACTAGACAGAGGAAAGAGTGCAATCCTGTATGTGAGGTCTCTCCTGTGGACCGAGACCTTTATGAATAAGGAAAACCAGAATCATTCATATTCTTTGAAGTCATCTGCTTCATTTAATGTCATAGAGTTTCCTTATAAAAACCTTCCAATTGAGGACATCTTCAACTCCACATTGGTCACCACAAATGTCACCTGGGGCATTCAGCCGGCACCCATGCCTGTTCCTGTGTGGGTGATCATTTTAGCTGTTCTAGCAGGATTGTTGTTACTGGCTGTTTTAGTTTTTGTAATGTACAGGATGGGCTTTTTTAAGCGTGTACGGCCACCTCAAGAAGAACAAGAAAGGGAACAGCTTCAGCCTCATGAAAATGGTGAAGGAAACTCAGAAACTTAACTGTAATTTTTAAGTTACGCTACATCCTGATCCATTAGAAGTTCCAACTTCAGTTTAGATTTTAATTTCCTTCCTGAGGAATAAAATTCCAAGACCGTACTGCTGATGGTGCCCATTGGTGTTAACCACAAAGTGAGAGCAATATTTGTCATCCTTTTCATTATGATTAAGTTCATACATACATTTAATACCCCTACTGACTTGTGTTTTTAGGTATTTAAATAATAACATTTCAAGTGATAGGTCTTCTTCAGTGTACATAAGATAGTGCCTGAGTTACCACTTTATCTAAAATAGTACCTCCTACAATTACTGTTTCTGATTTTGTATGTTGGATTTTGTTTGTCTTTTTTGTTGTTTTAAAGCAATCCAAATTTGGACCTTAGGATCCACATCTTTTGTGCAGATATATGATGTTAATACACGTTACACTACACTTGAGTTTTCAAGCTAACTTCATAGCTGTATAAACTTGGATTTTAATATTACCTATATGGTAGGACTTTTAAAAAAAGAAAAACGCATGATCCCATCAAAACTCTTTCTTGTAACTGCAAAGGTACAGATTTTTGTTTTAATGTGAAAATTGAGTACATGCTATTAAACTTGTATTTATATTTTTATCCACAGTCCATTTGATTACATTTTTTTTTGTATAAGTTTAAATTCTATTTCAAATCCTTTAAGTCAACTTATACTAAAAAATTAGTTTTTCCTGGTAGCTCAGCAGTAAAGAATCTACCTGCAATGCAGGAGATGCGGGTTTCATCCCCGCATCAGGAAGATTCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTGGAGTTCTCTTGCCTGGAAAATTCCATGGATAGAGGAGCCTGGCAGGCTACAGTCCATGGTGTCGCAAAGAGTTGGACTTGACTGAGCGACTAATACACACACAAGTTATATTTCAAATCCTTTAAGTCAACTTATACTAAAAATTAGTTTTATAATCAAAATTGCCTCTTTTGCATAATTGTTTAATTTCTGCTAAACATCATGATGCTTGAAGTTAGATGGAATTGGAAATTGTTTCCAAAGTATATTCTATTGCATTAGTCTGGCTGTAGACAATACCAGGAAAAAAAAAAAAAGCATTTAAATTAAAAGGCTATGTAGTTCTTTGACAGAGTTGCTTATTGAATAGTTTGTTCTTAGATTAGAGCAAGAGTTTTTAAGTTGGGATTAATTTATTTTCCTCCTATATATGTATTTTTCCTTATATTTTCAAAACTGTTATTGAGAATGTGTCAAGATCATTGAGAAAACTTTACAGTTTATAAGAACGTGCACTCAACCTCTGAATCCCACAAGAAATGCTAAGGTAGCTCACTGGTTTACTTCTAGCAATAGCATGATGCTACTCACATGGATATTACCTCAGTTGAAACCAGGTATAACATGTAAAACCAGTCTCAGCTATCATAATAACTTCTTAGAGGTTATTTTATAGGCAATTCAAGTTATTGGAAACCTTTTAAAATTTTCTTAGTTTTATTAATATGAACTACTTTTCTAGGATTTTTAAATAAAAGCTGTACAGGTGGCAAGTTGTAGTTTTTTAAGTCTGTAGGGTGATGAATCTTACTAGAAGATTATGTGAATTATTCACAGTTCCTCCAGGCCTGGGGATAACTGTTAATTATACCTATTTTTGTGTAATTACATCATATTGTGCATTAGAAATTGAGAGTTCAATAGCTTTTTAACTACTGCCTTCATTAGGTGATGATAAATATTTCCCTTAGATAATTGAATATTTTTCCATGTTTTAAAAATAATTGAAATTTTCTTGCCATGGCTTGTGTTATAACTCCCTACACAAGTGGCTAAACTAGAATACATTCATAAAATAGAGGCATATGTAGGTGAGTTGTACAAACAAGTTAGAACATTGACAAGACCCTATATTTAGCTTTAGTGACTTTCAAAATTGGTGTTATAATATAGATTTTACTAGTAGCTTAAAAGATCGTAGGTAGTCATACACAATAAGTACTTTTGTTACCAATAAATTTAAAGTTTTTTAAATAAAAATTTTTTTTATCATAGGGCCTGCCCCAAGACAGTTGCTAAGTTGGTCTAGAACAGCATTTACCTCACCTGTTTTCCCATCTAATAGCGGGTCATTCCTGGAAATATCTGTTGGATAGAAAGTCACTCTTTCAAAAAGTTAAATGTTACTATTTGCTTTTGCACAATCTGTTCCTTTTATGGCCTCTTCTCTCAAGATATAATCTTTTATGAGCGATTGAAGGAGGAGCCAAAATAGCTCAGTTGGGAGAGCATTAGACTAGAGGAGACTGAAGGGTCTTGTCATGAAAATTAACATGTTTTAAATTGCTCTTATGAACTGTAATTTAAAGCAATAGTATTTTCTTTTTTAAAAAAAATTTTATCTCTACAAAAATATGGTAGTCTAGACTTTGAAGACTAAAAACCTAGTCTTTGAAGAAAATATTTGGCAAAATGTTGGGATTAAAGTAACGTAAATGTTTTGGTTAAAATGTCAAAAAATAATCACTGCTGTATTTGTGATTTATTGAGAACTGAAAGCTGTTTTGACTGTAAAATTCTTATAATCTGGTTCAGTTTAAGAAATCACATATCGTTGGAGTTGGGAATATCGTAAAATATATGATATTGGTAAGAAATTGATTATGTTGTTGATTTCTTATGTAGGCATTTATTTCAGACTTAATATTTTGCAAAACATTTGTGTGAGGAATGCTCTTTCCTTTTCTTCCCTTTACCTTTCTGTTGTAATTAGTGATTATTATAATTCTGATTAAGTTCTTAATACTGAGTTGTAAAACAGTTAATCAAAATATTAGTGCCACAATTCTACATGTTTTGAAACTAATTATTCATAGTAAATTCTCATTAATACTTTATATAAAGAGAAAATTCAAGTGTTAGAGGCTCTACTGACTTCTCTAAGAGGATGTGAAAGGTTTCTGATAGTGAATCATAACCCTAAGAGAGATGTATGTGGCAAAAGTATAGTGTATAATAAGATCAGCGGGTTTTTTATAAGGCATACAGTCTGTAAATTGATAGATGTCCCTGTGTTACAGAATGTAGTGTTGAGCTTGCAAAGAATAAGCCATTCTTGGAATATTTGTGTACAACTGTTGCTTATCTCAGTATCACTGTGTTAGTGCTCTTGGATAGCTTATATATGCGATAGCTTGATTAATAAGAAAAATACAAAATTTGAAAATTGAATATAAGATCAAAAATAGAGAATGAAATGATGTAGTGCTCAGTGTTGTAGAGAGTATTTCTTTTAACTTGTTGGTAGGCTAGTTTGGCCAATGAACGTATCATGTAGCATGCATGTATGCTTGTATTTCATTGTAATTTCTCATACATAATGAATTTTTTGGCAGAGGTACTGAATCTTTGATTTTTTTTTGCTGTTGTTCTTCTCAAGTGCAATATAACAATGTAACCAAACCTAGATATTTCAAAGTCTAATTTAGTAAACCTAATCTAAAAGAATTTATTAGTATTTTTGTAAGCAGGAAGGAAGGATTCTGAGATGGATATATGAATGAAGTTATTTGCCCCTAAAAGGTCATTCTACCCTTTATTCATTCTACACTTTATTTCAGGCTGGACGTGAACTGTTCCCTGCTAGTTTTGAAACACTTTACAGTATCTTAAAGTTACTTGGAAGTTGTGTATATCAATTAATTTCCTACCTAGGTAACATAGAAAGTCATTTTCTTTCTTTAGCTCTCTTGTGATCACCCACATTGGGTGAGGCATAAAATGAGTGTGTTCTAAAATTTATGATTTGCTAACTTGATTTGAGTTAGTGAAAACTGGTACAGTGTTCTTCTTATTAGTTTCCAATGTGTAACTTGTGTCTGTTCAATAAACTTGAGCATGTGGTGCCACTTTTGTGCGTGGATGTTCTATTTTCCTTCTGTGATGTTGCTTTTTTTTAATCACAGGAGCCAGCAACAATGCACTAAAAGGATGACCTCAAAGAGGTGGCACATCTCTTTAAAAGTCCCAATTCTTAGCAGTGTTAGTTGGGAGGTGGAGGTTGACATACATACACTATTGACACTGTGTATAAAATAGATCACTAATGAGAACTTACTGTATAGCTTAGAGAACTCTACTCAGTGCTCTGTGGTGATGTAAATGGGAAGGAAATCCAAAAAAGGAGGGGTATATGTAAACATATAGCTGATTCACTTTGCTGTACAGCAGAAACTAATGCAACATTGTAAAGTAACTATATTCCAATAAAAATTCATAAAAAATTGAAATTTATCTACCTGCCTATCAACTTTCTGTAATAAACATGTATGTTCAAGTAAGA EMBV3_27387 AGGGCACTTATTAGTCTTGCCAGGGTTAGGGAAAAGAGAAGATATTTGCAACGAACAAAA Gene GeneID:615135|IPMK:NM_001035462:100_cdna UTR3_Alt 2 NULL GeneID:615135 26 GENE IPMK MGC127168 inositol polyphosphate multikinase EMBV3_18044 ACGCGTTGTCATTTGGGAGGGCCCGGGTGTTGTTACAGCTTCTTCACTGTAGTTTTGGAA Gene GeneID:513479|RNF114:NM_001024531:1027_cdna UTR3_Alt 3 NULL GeneID:513479 13 GENE RNF114 Znf313 ring finger protein 114 EMBV3_31106 TCGTCCTGTCAATATTCTCTCCTACCCCTTCTGCCTGCACCAAGACCTCATCAAGACAAC Gene GeneID:788731|LOC788731:XM_002707699:327_cdna Constitutive 0 NULL GeneID:788731 15 GENE LOC788731 NULL similar to cOR51P3 olfactory receptor family 51 subfamily P-like EMBV3_19237 CAAGATGACCATATAAAGGGCCCACTAAAGTTTTTGATGATGGTGATGAGAAAACGTTGA Variant GeneID:534612|ARID4B:XM_002698795:169_cdna 417^507 3 EMBV3_00992 GeneID:534612 28 GENE ARID4B NULL AT rich interactive domain 4B (RBP1-like) EMBV3_10699 TCTAGCCAAGAGAGCACACATGTTGACACACTGGAAAACTGCTTTAGAGAAGAGTCATGG Gene GeneID:767903|ATG12:NM_001076982:63_cdna Constitutive 1 NULL GeneID:767903 10 GENE ATG12 MGC127276 ATG12 autophagy related 12 homolog (S. cerevisiae) EMBV3_12619 CATTGAGATAGATTTAAGGAAAAATTTAATGACAGAATGTACCCATGTACATATGTGAAC Gene GeneID:540780|CASC4:NM_001081737:135_cdna Constitutive 2 NULL GeneID:540780 10 GENE CASC4 MGC152117 cancer susceptibility candidate 4 EMBV3_28691 ATCCAGATGGACCTGCCCTTGGTCCCTGGAGATAAGATCCACTGTTTGGACATCCTGTTT Gene GeneID:100299477|LOC100299477:XM_002696916:438_cdna Constitutive 0 NULL GeneID:100299477 22 GENE LOC100299477 NULL similar to sodium channel, voltage-gated, type X, alpha subunit EMBV3_29607 GAAGTCTGAGCGATCCTTCTGTGGACCTTGAAGTAAGCTACCATGTTATAGGAAGGCCAC Gene GeneID:533692|IRAK4:NM_001075998:27_cdna UTR3_Alt 3 NULL GeneID:533692 5 GENE IRAK4 IRAK-4 MGC137816 interleukin-1 receptor-associated kinase 4 EMBV3_17156 GATGGCTCAGCTATTTCTTGCCAGGTTTACACTAGTTGAGCTGAGTTTCTTTGGAAATTA Gene GeneID:281940|NCALD:NM_174398:6_cdna Constitutive 1 NULL GeneID:281940 14 GENE NCALD MGC139617 neurocalcin delta EMBV3_31097 AGAGTAATGGGACCATTATCCATGTGAAAGATGAAGAATAAGAGAAACAGGATGCTTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38393 GGGATTTATAAAGCCTACCAAACAGAAGACTGACCATGTGGCAAGGCTAACGTGGGGAGG Gene GeneID:523714|ORC3L:NM_001038139:20_cdna Constitutive 0 NULL GeneID:523714 9 GENE ORC3L MGC128021 origin recognition complex, subunit 3-like (yeast) EMBV3_01143 GACGATTCTCCTCAGGCTTTGGCCCTGCAAGTGACCCTACGTGTCTGCTCTGTATGTAAT Gene GeneID:537598|MAPK8IP3:XM_002697916:548_cdna Constitutive 0 NULL GeneID:537598 25 GENE MAPK8IP3 NULL mitogen-activated protein kinase 8 interacting protein 3 EMBV3_38139 CTACTTTCTTGCCAGCCTGGCAGTTTGAGGGCCTGTGTGTGCACCTCACCCCCCGCAACC Variant GeneID:513023|FBXO6:NM_001034433:64_cdna 190^375 1 EMBV3_39363 GeneID:513023 16 GENE FBXO6 MGC128818 F-box protein 6 EMBV3_18648 GAATGTCCACCGACAGGTCTTTTTCTTGCCCTCCTTATTGGAAACCATTCCTAATGTGCC Gene BVT0102_267796 + 0 NULL GK000007.2:69148461-69585065 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10114 GTTTCAACACTACTTTTGATTCCATGTATAGTGAAAGTATTGTAGAACATTGGTAGTTCC Gene GeneID:532798|LOC532798:XM_002698761:14_cdna Constitutive 2 NULL GeneID:532798 28 GENE LOC532798 NULL similar to Uncharacterized protein C1orf96 EMBV3_28289 GTTGAATAGTAGTGGTGAGAGTGGGCATCCTTGACTTCTTCCTGACTTTAGGGTAAATGC Gene BVT0102_094693 - 1 EMBV3_11397 GK000012.2:1-398726 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176150 TCONS_00221406 TCONS_00251068 TCONS_00020842 TCONS_00234011 TCONS_00072336 TCONS_00231833 TCONS_00179125 TCONS_00089141 TCONS_00232226 TCONS_00089492 11 XLOC_105929 XLOC_134721 XLOC_154011 XLOC_011517 XLOC_143490 XLOC_044105 XLOC_141321 XLOC_108898 XLOC_053927 XLOC_141712 XLOC_054276 Coding TCONS_00176150 XLOC_105929 NonCoding NonCoding - 3:22483408-22483930 - TSS130909 522 3 TCONS_00176150_3 55 1.00574712643678 1 0 0 0 0 0 0 0 0 1.41635797310892e-06 5.8696506869402e-05 2.6273899219887e-06 3.65451153040774e-07 0 0 6.00765119810615e-06 1.89784634929376e-06 0.000236119018313696 0.00579766346680866 1.60223015012651e-05 0 1.37766984293209e-05 0 2.13237753811374e-05 0.0030310073532958 0.000169055899068195 0 0 3.8265030092562e-06 1.67279382855558e-06 8.0766063456619e-05 1.24737979833536e-05 XM_001788594.4 LOC538808 PREDICTED: Bos taurus kinesin family member 7-like (LOC538808), 4e-104 381 93.98 0.475095785440613 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 4e-41 172 73.20 0.519157088122605 0 noncoding GAGGGAGAGGGTGGGAAGATTTGGGAGAATGGCATTGAAACATGTAAAATATCATGTATGAAACGAGTTGCCAGTCCAGGTTCAATGCATGATACTGGATGCTTGGGGCTAGTGCACTGGGACGACCCAGAGGGATGGTATGGGGAGGGAGGAGGGTTCAGGATGGGGAACACATGTATACCTGTGGTGGATTCATTTTGATATTTGGCAAAACTATTACAATTTTGTAAAGTTAAAAAAAAAAAAAAACCCTCCAGAAAGCAGGAATAGAAGGAACATATCTCAACATAATAAAAGCCATATATGATAAATCCACAGCAAACATTATCCTCAATGGTGAAAAATTGAAAGCATTTCCCCTAAAGTCAGGAACAAGACAAGGGTGCCCACTCTCACCACTACTATTCAACATAGTTTTGGCCACAGCAATCAGAGCAGAAAAAGAATCCAGATTGGAAAAGAAGAAGTAAAACTCTCACTGTCTGCAGATGACATGATCCTCTACATAGAAAACCCTAAAGA TCONS_00172537 TCONS_00172538 TCONS_00172539 TCONS_00172540 TCONS_00172541 TCONS_00172542 TCONS_00172543 TCONS_00172544 TCONS_00172545 TCONS_00172546 TCONS_00172547 TCONS_00172548 TCONS_00172549 TCONS_00172550 TCONS_00172551 TCONS_00172552 TCONS_00172553 TCONS_00172554 TCONS_00172555 . 3' 2938 TCONS_00172537 TCONS_00172538 TCONS_00172539 TCONS_00172540 TCONS_00172541 TCONS_00172542 TCONS_00172543 TCONS_00172544 TCONS_00172545 TCONS_00172546 TCONS_00172547 TCONS_00172548 TCONS_00172549 TCONS_00172550 TCONS_00172551 TCONS_00172552 TCONS_00172553 TCONS_00172554 TCONS_00172555 . 3' 3459 EMBV3_35008 TTCCGCGTCCTGGCTCTGAATCATCGTACGGCTGGCCATCCCTCTGAGGTGAAGACACCA Gene GeneID:784502|LOC784502:XM_002699215:38_cdna Constitutive 0 NULL GeneID:784502 29 GENE LOC784502 NULL similar to hCG2032690 EMBV3_20369 GCCCCTTCCTGCCAGAATTGTTGTCAGAAGGTAAGACTGCCGCAGCCGTGATCGGAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14837 GCCAGGGTACGTGAACTTGAAGGAGAGGTTGAAAGTGAGCAGAAGCGTAATGCTGAGGCT Gene GeneID:281339|MYH8:XM_002695805:138_cdna Constitutive 0 NULL GeneID:281339 19 GENE MYH8 MHC_67 myosin, heavy chain 8, skeletal muscle, perinatal EMBV3_18573 CCCCGTGGTGCTGTCTTTGATCCATGTTCTTAGCCAGGTTGATGGGGCTGTTTTCAAAGT Gene BVV0102_296561 + 0 NULL GK000019.2:9019158-9038190 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42158 TCAACAGATTGAGTTTCCTCTCCCCTCTTTGTGGGGGATGCTAGGGCACTTGTAAGAGGA Gene GeneID:533590|PTPN11:XM_002694590:675_cdna Constitutive 1 NULL GeneID:533590 17 GENE PTPN11 NULL protein tyrosine phosphatase, non-receptor type 11 EMBV3_22035 GGAACTATGAGAACTCAAGGTGGTTGAGAATTTGGTCCCCCTCCCAGGTACCCCTTTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30791 CTGAGAGGACAAAGACAGCTTCAGGCTCTAGACACATTCCCCTCCTTCACGGACGCTTAT Gene BVV0101_015794 + 0 NULL GK000007.2:70481861-70554915 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03175 CTGAAGCTCCTATGTTCACCACAGACCCTCCCCCTGCTCATCAGACATAAGGGTGTTGTT Gene BVT0102_018191 + 1 EMBV3_05821 GK000017.2:44665572-44965479 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077099 TCONS_00077100 TCONS_00077101 1 XLOC_046983 Coding TCONS_00077099 XLOC_046983 Coding Coding ZNF605 17:44963637-44991146 = TSS57722 5516 1 TCONS_00077099_5 674 0.348078317621465 5 0.799658281227279 0.000677636489116705 5.15774366072241e-07 0.000148668117543514 0.00020399087070435 5.0584158695743e-05 0.000208164661909314 0.000193114768144376 0.000457243353712283 5.96731807843511e-05 2.13778774135169e-07 2.45666727387997e-08 1.70472160122835e-07 2.11731008651291e-05 2.42333188248076e-07 1.12649886400771e-06 0.000615146235228808 1.4562055157935e-07 0.000218340162983924 0.000260669767789275 3.78258052399828e-05 1.55645980190903e-07 3.6255221846395e-05 0.000210592700965431 7.18315433196848e-05 0.000530273303009397 0.000170282534668936 0.000250579388536201 8.27124310575066e-06 2.52068931518891e-07 0.000162885119896452 XM_002694442.3 ZNF605 PREDICTED: Bos taurus zinc finger protein 605 (ZNF605), transcript 0.0 9948 100.00 0.999818709209572 NM_001164715.1 ZNF605 Homo sapiens zinc finger protein 605 (ZNF605), transcript variant 0.0 2888 76.95 0.707396664249456 TCONS_00077099_5 sp|Q86T29|ZN605_HUMAN ZN605_HUMAN Zinc finger protein 605; 0.0 1139 81.90 0.998516320474777 5 coding 0 0 0 0 -0.0143843222351816 0.895305855864041 0.0018310405863369 0.989164242313396 CCCCGCCCCTGTGGCGTCCTTGGCTCTGATCTGGTGTCTGGCTGATGTCAGTGACCTGGCTCATGAGTGGTGGAGAAATTGAAAGTGCCATGGGTCTCAGGATCAAGACTTGTGTGAGATAAGAAAGAAGAGGCCTCAGGACTTGGGGTGCATTCCTATCTTTGACCAGAGGTTCAGAGTATCAGGACAGAGAGAAGTCACAGAGAGAGCAGATTTTCCAGAACTGGGGAAGATGATGAAGTCACAGATATCGTTTGAAGATGTGGCTGTGAATTTCACATTGGAGGAGTGGCAGCTGCTTAATCCTACTCAGAAGACCTTGTACAGAGACGTGATGTTGGAGAACTATAGCAATCTAGTTTTATTGGGTTATCAAGTTATCAAACCTGAGATGATCTTCAAGCTGGAGCAAGAAAACCCATGGTTATTAGATGAAGAAATCCTAAGTCAAAACTTCTCAGAAAAAGTCTGGCTAGATAATAATCTCAAAATGTGGCATCAGGATAATCAAGACAAGCTTAAAAGTTTGGAGAGAGGCCATGAATATGACATCTTTGAGAGAATGTTTCATTTAGGCATTAACTTTGATCATTTAGGAATGAGATCCCATAAATGTGGCACAGGTGAAAAAAGTCTGAAGGATCCTTTTGATTTTCTTATTCCAAAAAGTAACTGTGAAAGAAAGAAACTTGATGAGCTTAATAGGAAATTATTATTTTGTATTAAACCTGCCAGAACTTATGGTGGAATAAAATACTCTGATGGCAATACATGTAGAAAAGTCAGCAGTAAAGAGCCAGGACTCATTATGAGCCATATACCACACACAGGAGTCTGTTTGTGCATGGAATGTGGCAAGGTTTTTAATAAAAAGTCACAGCTCATTATACATCAAAGAACTCATACAGGAGAGAAGCCCTATGGATGCCGGGACTGTGGGAAAGCTTTCTCCCAGAAGTCATTGCTCACTATTCATCAAAGGACTCATTCAGGAGAAAAACCATATGGGTGTGGGGAATGTCAGAAAGCTTTCAGTAGGAAATCACTGCTCATTTTACATCAGAGAACTCACACAGGAGAGAAGCCCTATGGCTGCAGTGACTGTGGGAAAGCCTTCAGCAGGAAGTCACAGCTTAAAAGACATCAGATAACCCATACAATAGAGAAGCCCTATGGCTGCAGTGACTGTGGGAAAGTCTTCTCCCAGAAATTAAAGCTCATTACACATCAGAGGACACACACAGGCGAGAAGCCCTACAGATGTAGTGATTGTGGAAAAGCCTTCTTTTGGAAGTCACAGCTTATAACTCATCAGAGGGTTCATACAGGGAAGAAGCCGTATGCCTGTAGTGAATGTAAAAAAGCCTTCAGCAGGAACTCACTCCTCATTAGGCATCAGAGGATCCATACAGGAGAGAAACCCTATGAATGCAGTGAATGTGGTGAAGCCTTCATCAGAAAACCACAACTTGTTAAACATCAAATGACTCATACGGGAGAGAAGAACTATCAGTGCAGTAATTGTGAGGAAGCCTTCTTTAAGAAGTCAGAACTAATTAAACATCAAAAGGTTCATTTAGGAGAAAGACCCTATGGATGTGTTGAATGTGGAAAAACCTTCTTTGGAAAGTCACAGCTCCTGACACATCAAAGAACTCACACTGGAGAGAAACCTTATGAATGTAGTGCCTGTGGGAAAGCCTTCACCCAGAAGTCCAGCCTGGTGTCCCATCAGAGGACACATACAGGGGAGAAACCTTATGAATGCAGTGAATGTGGGAAAACCTTCAGTGAGAAGTCAAGTCTCATTCACCATCAGAGAACCCATACTGGAGAAAAACCCTTCGAATGTGGTGAGTGTAGGAAAGCTTTTGCCTGGAAGCCACAGCTTCTTAGGCACCAGAGAATTCATACAGGGGAGAAACCCTATGGATGCAGTGAATGTGGAAAGGCATTTGTTCAGAAAGTACAGCTCATTAAACATCAGAGAAATCATACAGGAGAGAAGACCTATGGATGCAATGACTGTGCAAAAGCTTTCTTTGAGAAGGCACAGCTCATTATACATCAGAGAATTCATACAGGAGAGAGACCCTATAAATGTGAGGAATGTGGGAAGTCTTTCACTAGGAAGTCACACCTTATGAGGCATCAGAGGATCCATACAGGGGATAAGTACTATGGATGCAGTGAATGTGGGACTGTCTTCCACAGGAAGGCGCAGCTCCTGATTCATCAGAGAAGTCATATGCTGTAGACATGGGGTGAATGTGGTGAGTGTGGGGAGTCTGCCATCAGATGTCAGGTCCCTGACATTCCAAGGACATGTATGGGAGAGAAACTCTGTCACTGCAGTGACTGTCTTACCACATAGAATTTAGAAAGAGAACCTTTTTTTGTTGTTGTTGTTAAGTAGACGATATAGGAAAGTCTTCTCCCAGGAAACACAACTTGTGGCATATTGATGGCTCCTCAGTGTGGAAGTCTTATCAGTATTGTGTTAAGTATAGACCTTTCAGTCAAAAGTGCCAGGCTATTAAATTTTAGAAGACCTAAACAGGAGAAAAAATCAATTGTTGTAACAAGTGAGTGAAAATTTCATTGGGAAATTGTAGCCCAGAGTACACTAGATAATACATACACAAAGGAAGTAACTGAGTATTATATACTATAGGTCTCATGCAGAGGAGTAGTCTTAGTACATTGAAGAATTTGATAAGCATGATCCCTGTTGAAATAATTCTTTAAGAAGGTTATGTTTATTGTATATAAATTTTTGTAAGAGAATAGGCATTTTTAAAGTGGTAGCTGTGTTTGAGGTGTGAAGACTTCTTTCTGCTTTCTGTTAGGGTGGTATAATAAGAACCACATAAACTCTCCTGCTTTAAACAGCTAGAAACTCCATTTATGAAATAGTGGTTTTTAGACATATGTCAAGTGCAGGTTTATGATCCCTGGCAGGAGGTGGACAAAATAAGGACAGCCCCACGACTGCCCAGCCTACTACCTGGGGGCCACTGTCAAGGCTGCAGGTCAGGGAGTTGAATGAACATGGTCTTGCTGAACTGAAGAGGGTTTCTGAGTTGGCATTTGAGGAACCTCGGTAGCTAGAATTTGCAGGTGAAGGGTGCTGGGTAAGAAGGAGCTCCCCAGAGAGGAGGCTGTATAAATCCTCAGTGAGTCCCTCTTTGAGTATTTGGCTTTAGTCCTTATTTGCATGTGTGTGGAAGAAAACTGAGACTCTGAGAGGAGCTGGGTAGCAGGGAGCTGAACAAGCCCTGGAGCTTAGCACAGGCTGAGACAGTTTGTGTTCCCACCAGCCACTTGGAGGCAGCTTTTTGCACAGGGGCATCAAGGGGAGTTTCCAGAACAGAGTTGTCTTGGGGACAGTGGAGAATCACTTAACCTAGATTAAAAGGTACTCTGGACCCACAGTGTTTGACATCCAGAAACTTACCTGGCACACCAAGAGGCAGGAACATATGACTTGTAACTACAAGAAAAATCAGTCAATAGAAAGAGGAAAGACTGAATTGATGGGAAGTAGTAGACAAGTATATTCAAATAGCTACTGTAAGTATAAAGTAGAAGAAAACATAAATTTGATGAAACCTGGAGTGTAAGATACACTTTTAAAAGCTCAAATGGAACTTCTCAGGTTGAGAACAACTCTGAAAAATAAAAAATAAAAAAACCCAACTGGAATTAAGAACATATTAGACATAGAAGAAGGAAAGAAATCAATGAATCTGAAGAGTAAGAATGAAAATTATCAAATGATATACCCAGAGAAAAACACTGTGGGTGGGGGGAAAGGAGGACAGGAAATTAGTTAAAAGTGGTGTAATATACATGTAATGGAAGGTCTAGAGGAGAGAGGTGAGAGGCGGCAGAAAAGGGATTTGAATAAATGATGGCTGAAAAATACCCATATATGATGAAAAGTATAAACGCACATATTCAAGAAGTTCAAAGAACCCAACACAGAAGAAACATAAAGATGCCAACGGACATCACAGTCAGTTGATGAAAACTGGAGTTAAAGAGAACAATTGTTGGGAATTCCCTGGTGGCCAAGTGGCTGGGAGTCTGCCTTCCAATTCAAGGAGTGAAGGTTCAGTCCCTTGTGGGAAACAGATCCCCCATGACGTGTGGCCCAGTCAAAAAAAAATTTTTTTTAATTGAGCAATTGTAAAATGCCTGGAGAAAAAAGGACAGGACACACCCACAGAGCAAAAAATTACAATATACTTCTGGTCAGAAACTATGCAAACTATAGGACAACAGAATGACGCTGTTAAGTTACAAAAGAAAATAAAGAACCTCCCCTGCCCCACAGCCTGGAGTTCAATTGCCTGTCAAAAACGAAACCAAAAAGGACTTCAAAAAAGCAAAATCAGAGAGAGTTCCTGCCTTCAGGAAACATTGAAGTTTGGGGACTGCAGGAAAACACCACTCTGGAAATGAAAGGTTCTGGAAATGGTGAATGCATGGGTGAATATGAAAGATTTTTGTCTTTATTTTAAAATTCCTTAAAAAGGTAATGAACTGCTTTAAACCAAACTAATGACAGCATACCTTGGGTTAAGATCTACTTAGAAGTAAAGTGCTACAGTAGTACTTAAGTATGAATCTATAAAAATAGTTGAAGAGACTTGTGTTGTCTGAGTCAGAGATGTGGGATGACTTGTATCTTTAGCAGCTATATGATGAAAAGTGTCTGTGTTATGGATCTGTACATGTGCTCATGTTCTCTGAGTGTTCTCCATGTCCACACCATTTTCCTCCTTTCTTTGTACGCCCAGAGGGAGTGCACTGCTTCCTAGGATTTCTGCTTAGGTTTGGAGAGGCGAGGTGTGTGTCACCCCTGCTTCTCTCCTGCTGGCACACATCTGGGGGTGTCTGTCCATGTGGCTGAAGCTCCTATGTTCACCACAGACCCTCCCCCTGCTCATCAGACATAAGGGTGTTGTTAATTGCTTCTGGGGACTTCACCATCCCTGGTTGATTTTCTTAATTCTAGACACACTTCTGTAAATAGTTTGTTTATTAAATATTCTTGAGTTAATCATTTTAAGTATAACGTTTGTTACAAATGATGAACGTTTGACCAAATTTTGAGTATCAGTTACTGGTCCATGGGGCATAGGCTGACATCTTTTGAGATTTCTCACACTCAAGATCAGTATTTTCTCTTTGTGTTTTAATAATTCAGTAAAAAATTATAAATTCTTTGTGTGTTTTGTTTTGCTGCAAACATAAATGACTCTGGAGATTGTTACCATCTGCTCCATATGCCGGTGGTCTCACAGCAATAGACTGAACATCATGAGGTCTTTGTGCTACCTCTGGGTTGGTTGACCTTACAAGAAAGCATTATTATTTTTGTTAAATATGTATGGGCAAGAAAAAGGTAACTCATTACTGAGTGAAGAAAGAAAGGAATAATGTACTGTACTTCCCTGTACTCTTATTTTAAAAACTTGTGCTGTGCAATTAAAATACTCTTATTCCAT EMBV3_39660 TTCATTCAGGAATTGAAGTATATGGCAGAGATTCTCTGTGGGAAAGAGATTCCTCGCTGG Variant GeneID:519650|PPPDE1:NM_001100384:50_cdna 137^372 2 EMBV3_39848 GeneID:519650 16 GENE PPPDE1 FAM152A PPPDE peptidase domain containing 1 EMBV3_23715 TTCCTGGCATCACCCTTTCCCACCAAACCCTAGATCCACCCAGGCCTTTCTGTAAATAAA Gene GeneID:505942|COL9A2:XM_002686542:774_cdna Constitutive 0 NULL GeneID:505942 3 GENE COL9A2 NULL collagen, type IX, alpha 2 EMBV3_36683 TGGAGCGAAGAGCCCGGACCAAGCGCTCAGTCAAGTCAACATTGCTGCTGTATCAAAGTC Variant GeneID:511783|PHKB:XM_002694773:563_cdna 82^168 1 EMBV3_39377 GeneID:511783 18 GENE PHKB NULL phosphorylase kinase, beta EMBV3_43648 GCACAGCCTCTATTTTTATTCTCGGATGGTGGAGAGAATCAGAGACTCAGCCGACTCCTC Gene BVV0102_025639 + 0 NULL GK000001.2:152899477-153233566 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40002 ACGATCAAGACGAGGCCGAGGAGCAGGAGGGTGCTGGCTGCGCTCCCCGTTCTCGCTGAA Gene GeneID:100139773|LOC100139773:XR_083792:400_cdna Constitutive 0 NULL GeneID:100139773 11 PSEUDO LOC100139773 NULL hypothetical LOC100139773 EMBV3_29486 CCCATGGGGTCATGCTCATCTTCAGTCCTTCTACCTCCATAATCCTCTAGTAGGAAACAA Gene BVT0102_152295 + 1 EMBV3_42004 GK000027.2:34353370-34367776 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37472 CAACAGTATCGCCAGTCTCCGTCTCAAGGCCAAGGAGTTCAGCCTGCATCACAGCCAGGT Gene GeneID:534258|PRRX2:XM_002691674:444_cdna Constitutive 0 NULL GeneID:534258 11 GENE PRRX2 NULL paired related homeobox 2 EMBV3_36847 TCGCGAGCTATCAGATGCCCAGTGGGAAGACGTGGTACAGAAGGCCCTCCAAGCCCGGCA Gene GeneID:282462|MEA1:NM_174648:216_cdna Constitutive 1 NULL GeneID:282462 23 GENE MEA1 MEA male-enhanced antigen 1 EMBV3_22381 GGGTTTATAGGGTTCTCTTGGAGTAATATCCCATGCACAACTGGGGTAAGGAAGCTCAGG Gene GeneID:533443|CNOT8:XM_002689325:48_cdna Constitutive 0 NULL GeneID:533443 7 GENE CNOT8 NULL CCR4-NOT transcription complex, subunit 8 EMBV3_28042 AACCCAGATGCTGGTCATTGTGCTTGGGACCTTCATTGTCTGCTGGCTGCCCTTCTTCTT Gene GeneID:537043|DRD3:XM_002684780:3_cdna Constitutive 0 NULL GeneID:537043 1 GENE DRD3 NULL dopamine receptor D3 EMBV3_18619 ACCACCCAGCCGGGGCCTTCTCACCTGTTGCATGGGCTTTACACTTTATCTCTGCATTTT Gene GeneID:514428|PPP1R3B:NM_001103247:10_cdna Constitutive 0 NULL GeneID:514428 27 GENE PPP1R3B MGC139088 protein phosphatase 1, regulatory (inhibitor) subunit 3B EMBV3_26496 TCTGCCTCTCAGGCTTGCACCGAGGGTCTATACCACGCTATCTTACAGAAATGTGAGTGG Gene BVT0102_239102 - 1 EMBV3_25530 GK000026.2:18719927-18732856 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00153352 1 XLOC_093116 NonCoding TCONS_00153352 XLOC_093116 NonCoding NonCoding - 26:18727589-18732433 - TSS114522 4844 1 TCONS_00153352_9 151 0.37056151940545 1 0 0 0 4.77600996757972e-07 0 0 0 0 0 1.62884653433541e-06 0.000222967116312154 4.48952548004072e-06 0 7.29758410916096e-05 3.88439289464893e-06 3.44365679106956e-05 0.000880571197047627 0.000226778988144982 0.000176112786459932 0 0 0 0.000350546405158337 9.84826891553247e-05 0.000214576361011515 0 0 0 0.000210339860029262 4.00875619255425e-05 7.13675376779027e-05 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 1e-90 340 82.72 0.0639966969446738 0 noncoding GAACCTCCAGAATCCCACCCAGCTCCATTCAAAGGAGACCCCCCTACCCATCACCCCATGGCCCTTGTTCCTGCAGGCTGGTGGGAGCCATGTGGAGAACAAGCCTAGAGACCCACAGGTGAGAATGTGGGTTCTGGCCTGGCTCACAGAGCTCTAGTAGAGCCCCCTGTCCTGCAGCTGTGGGGGACTTCCTGTTTAGGTACCATCCCAGTGGTGCAACAGGCTGGATTGTGAATCAGGAGACCTAAGTTCTAAATTTGGTACTCATTTCATCAACCAATTGTGTGACCTAAGGCAAGTCACTCACTCTCTCTGAGTCTCAATTACCCCCTCCAAAAAATGAGAAGCCTGGAGCAAATATTCTTTAAGGTCTCTTCCAGCTCAGGCATGCTCTTATAGCATAATGCCAGTACACAGTACATGTTCAGGAAATGTTTATCTAGTAATTTAACTAGATTTAAGGCAGGATTCTCTAGGTGCCTGCACCCATGTACTTTCTTACTATGCTTTTTGCCTCTGCTGTTAGCTGATTTGGGTCAAGTGCCAGCTTAGGGCTTGGGACACAATAGGTGTGAGTTGAGTCTATATATACGGTATGTTTACAGTCGCCCAGAGACTGAAGACAAAACAGAATCTGACTGTGAGCAGCAAGAGCTAGTCCTAGGATGTCAGGGTGGGCTCTGTGGTCCTTCTTGTTACAGGTCGCCTCATTGCATCGGGGCTCAGAGCAACTGTCAAGTGTCACTGCTTGTTCCCTAAACAATCTGGCCTTACTTTGGCTCACAGTGCTCCTTCTGCCTGGAACACCTGTCAGGACTTATATACTCAATTTATAAGCTAATAAGCTAATCTGCTGTTGTTTCATATATACCGGCAGAAGACACAGGATTCCTGGGTCAGAGACAAAGGATTGACCGCTGTTGGCATAGCAAGCAACATTCGCACGGTTGTCACACATCTTTCTCTGGTTTTCAAGTTTCACGGGGGCACCACGGAGGGGCCCAGGTGGATGTTACACATGCAACAGGTTTGTATCATAGCTGAGGAGCACTGAGCTGGGAAAACCCACCACTGTCCCCTCCTACCTCACCACTTTTATCATAAGCAATAAGCAAGTCTGCTCTGTGTCTGGGAGAAAATGTTCCTTCATCCCTCGAAATTCCTGACTGCAAACACAGCACTGAGAAATGATGGGGGAAAGAGCAGTCATGGCCTTGCATTCTCAGCATACATGCCTGGTGATAACACTCAAAGAGGCTCAGGACCTGCCTGATGGGGAACTGCCTCGTCCAAGACACCTACCCTCCACCTCTGCTTGTCAAAATCCCATCCATCCTCAAATGACACTTTGTTTTTGAATCTTTCTCCAGCCCTCCCACCACCAACACTTTCCCTTTTGTATTTTCCTTATAATTCTCGTCTACGTCTCTTTGTTGTGTCCACAACTGTCCCCCTCCTACCAACAGAGTGCAAACACTTGGAGGGCAGGCCTTGGTCCTCTTCATTCCTGTATTCCACACCCAGCTCGTTTGCATCCATTGGGTGCTTAGACTGTATTTGTTGTGTTGGAGGTATCTAGATCTTTGGGCATGGTTATGCTTCTGCAAAGTCTGATGGACTGCCTTTTGGAATATTTTCAACATTCCAGAGGCTAAAAATACCTCCTCAAAGCTGTCAAAGATGTTTCCTTGTAAGGAGTAGGATTTGCCTCGTGAAGCCCAAAGTTTATGTCCACCAGGTGGCGCCCCACCCCCAACTCTCCAGATGCCTTTTTTAGAGGGAAGGGATTCTCTTGTCTGCCTCTAAATGTTTGTTGGCTTAGGTCCCCCACTTACAGAGATAGTTTTGTAGCGTAATTCCCTGTCACTGGTCCAGCACAAAGATTCAGCGTTCAGCTGCGCATTCTAGTCCCAGCCCCACTCAAGACTGGCACCCTGAAGACACTGAAGGATGTCTCTCCAAGGGTTGCTCAGGGATGTTGAGGGAAAAGACCCGAAATCGGGGCTAGAAGACCTAGGTTTGAGTCCCCACACTGAGTAGCTGTGTTTCTTTGGGTAAGTCCTGTAACCTTTCTGGGTCCCTGTGAGAGTAGCTGAGAATTAAATATGAGAAACTATATAAAAGCACACTGAATGTGGACCTGGGGTCAGCCACACCTGGGCTGCTGTTTAAACCTTCACCCATTAGTTCTGTGACCATGGTCCTCTTCCTTATCCCTCTAAGCTTTGGTTGCCCCATCAGTGAATCAGAGTTAACACCAGTTATTTTACTTATTTTATAAAGTATGTTTATTTGGCTGCATTGGGTCTTAGATGTGGCACGTGGGGTCTTCGATCTTTGTTGCAGCAGGTAGGAGCTGTGGTTGAGGCACGCTAACTCTTAGTTGAGATGTGAAGGATCTAATTCTCTGACCGGGAATTGAACCTGGGCCCCCTGCATTGGGTGCTAGGAGTTTTAGCTCCTGGACCCCCAGGGAGGTCCCAATACCAGTTATTTAAAGAGTTGGTATACGGGACTTCCCTGGTGGTCCAGCGGCTAAGACTTCACGCTGCCAGTGCAGGGGGCCTGGGTTCAATCCCTGGTCAAGGAACTAGATCCCACATGACACCACTAAGACCCAGTACAGTCAAATAAAATAAATAAATAAAATTAAAAAAATAAAAATAAAGAGTTGGTATAAGGATTAGATAGCACAATAAATATGATGTAATTTATTACTAAGCACAGTAATGCTTAGCGTATAGTAAGCATTCAATTCATAACAATCACATATATATTATGTATCTCTAACCCCTCAAATAGTGCCAAGCATTACTAAGTGCTAACACCCATCTGCTGAATAAAAGGATTTCACAGATGAGGAAACTGAGGCACAAAGAGGTTAAATCACACACATACACACACACAAACCACCTCCCAGCACTAGGGAGTGGTGAGGCAGTGAGAAGTAGCCCGGCAGTCTGCCTCTCAGGCTTGCACCGAGGGTCTATACCACGCTATCTTACAAAAATGTGAGTGGTATACACACCATTTTTTAATTTAAAATTTACATTTGGAGTTTTCTCAGGTACCTGTAGGTGGGGCTGAGTTGGCAGTGGGAGGCATTAGCTCCCTGAAAACCATGTAGCTTTTCCCTCAAGGGGAGCCAGGGACCAGCAATCTCATCCCATGACTGAGATGAGGGACAAGCTCTGCAGGGTAGATAAGCTGGACGTCTTATCCAGGCACACTCCCCAGGACAACAGGTGTCTTCTCACTTCCACTGCCGTGTCTGCAGCCACCCAGTCATCCACTCCATGGATATTTACTGAATCTCCTATGTGCCAGGCACCCGCAAAGATGGATAAGATGGAGCTGACTTAGAACTATGCTGAGGGACCCTCCAATGAGGTGCCTAGAAGAGCCAACAAACCAAAGGAAAAACATTTAAACTGGGCATTGAAGGTTAAATAGGAGTTTGTCAGCCAAACGGGGTCTGGGATTGAAGCGCTGCTGCTTAGTCGCTCATCCATGTCCCACTCTTCTCGACTCCATGAACTGCAGCCCATCAGGCTCCTCTGTCCATGGGGATTCTCCAGGCAAGAATACTAGAGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGTCTCCTGCATTGCGGGTGGATTCTTTACCATCTGAGCCACCAGGGAAGCCTAAGAATACTGGCATGAGTAGCCTGTCCCTTCTCCAGGGGATTTTCCTGACCCAGGAATTGAACTGGGGCCTCCTGCATTGCACATGGACTCTTTACCAGCTGAGCTACCAAGGAAGCCTGGGATTGAAGAGCCTATTCCGGAACCTTAAGAGGTTTGATGCGGTTGGCATACTGAATGTGAGCATGGGTAAGAAAAGGAAGAGGGAAACCAGGAAATTGGGAGTCCGTTGGGGCCAGATGAAACATGTGAAACATGTCCATAGAAGAGATAGAACCCTATATCCTGTGGTCAGCAGGAAGCAGTGTATATACACAACCAGGTCTGTATTTTAGAAAGATGCCACAGTGCATGAAGGTTAGTTCATAAGAGGAGGGAAGAAAGACCAGCAATAATTACCAGCTTCGTAGTCTTAACCCCTCTAGGCTTCCTTTTTCTCCTCAGCAAGATGAGAAAAATAATGGTATGTATCTTATGTGCATGAGTGCTAAGTTGCTTCAGTCGTGTCTGACTCTTTGTGACCCTATGGACTGTAACCCACCAGGCTCCTCTGTCCTTGGGATTCTCCAGGGAAGCATACTGGAGTGGGATGCCATGCCCTCTTCCAAAGGATCTTCCTGACCTAGGGATGGAACCCATGTCTCTTATGTCTCCTGAATTGGAAAGTGGGTTCTTTACCACCAGCGCCACCTGGGAAACCCCTGTATGTATCTTTGGGGGCTGTCAAATGAGACTTCATAAATGAGAATTTCTGCAAAGCACCGTAATAGCAATAACGTAAAGCATTGTTGGGCTTTGCTATCTCTTAGAGCTGGGTTTGTGTCTTGGTCGTGCTGGGAAGTCTACTTTTAGTACACTTGATGGCAAAGAAGGCTGGAAAAGAGATTGGACTAACTCGGACTTTGCTTTGTGCAGTGGGAAGCAAAGTGGAGGCCTGGAGTGGGTGATGGTCCCTTTCAATGACAGAAGGACTCAGATGGCTGAGTCCAAGTCTGAGCCCAGCTTTAGAAAGAATAAGTTTGAGGTGAGCACTAGCAGGGTATGATACTCCGATGTCCAGGTGAGAATAGGTGGCAGCTTAAGCCCAGCACTGCTCTGCTCCCTCGCCAAGGAAGGGCCGGGAGGCCCCAGCGGGCTGCCGGACAGGAGAGAGGAGAAAG TCONS_00150323 TCONS_00150324 . 5' 424 TCONS_00150323 TCONS_00150324 . 5' 424 EMBV3_05464 GGATGAAAGGAGGAAGCTTGTACCATCACCAAAGGCACAGAAGGCCCTGGTTACTATCTC Gene GeneID:615857|PRR11:NM_001098137:54_cdna Constitutive 0 NULL GeneID:615857 19 GENE PRR11 MGC148775 proline rich 11 EMBV3_17625 TGATTCCCACCCAGACAGGTGTCAGATGAAGCAGGCCTTACTGAATGAAGTCACTGGCCT Gene GeneID:533209|C18H19orf12:NM_001076892:339_cdna Constitutive 0 NULL GeneID:533209 18 GENE C18H19orf12 C19orf12 MGC143097 chromosome 19 open reading frame 12 ortholog EMBV3_12645 TGCTTTTCAAGGCGGACGGGATGGTGAGCAGAGCCTCACATTTCGCCCTTTTCCTGGGCT Gene GeneID:100297783|LOC100297783:XM_002686856:50_cdna Constitutive 0 NULL GeneID:100297783 4 GENE LOC100297783 NULL hypothetical protein LOC100297783 EMBV3_18894 CCCCTTAACACTAAATAGTTCATTCCCCTCTCTTCTTGCTTGCATGGGTTCTGAGGAAAA Gene BVV0102_356828 + 0 NULL GK000015.2:38044616-38160930 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28368 TCCCGTGTAGTAATACAATTGCCACCCATTCCACTAACTGAACGTTTTGGTGGTTTCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04644 GTCCCCATGTGGTCAAGCTAGGGCCGCAAAGTATTGTTCTTCTTGTGTGCAGTGAGCTTG Gene BVT0102_021506 + 1 EMBV3_30266 GK000007.2:17752623-17757610 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00143 TGTTCATCTGGTCATCAAGACCCCTCAGAACTGGCTTTGGGGGCATCCTGGGCTTGGGCA Variant GeneID:533021|UBQLN4:NM_001080295:174_cdna 276^493 1 EMBV3_15187 GeneID:533021 3 GENE UBQLN4 MGC154983 ubiquilin 4 EMBV3_33448 TTGGGTGAACCCTTTGCAGAAGACAGAAGAGGAGGAAGAGTTGGGGGAGGAGGAAGAGAA Gene GeneID:505298|RSPH6A:XM_002695173:811_cdna Constitutive 0 NULL GeneID:505298 18 GENE RSPH6A RSHL1 radial spoke head 6 homolog A (Chlamydomonas) EMBV3_22802 GACCGAGGTACCGATTTCTGCTAAGTTCTCCCAACAACATGAAACTGCCTATTCACGCCG Gene GeneID:785855|HOXB8:XM_002695942:369_cdna Constitutive 0 NULL GeneID:785855 19 GENE HOXB8 NULL homeobox B8 EMBV3_19717 TTTGGCAGGGGCTTCAGAACACTTGGGAGATATGGAAGGGACAAAGGAACACAATCCAGG Gene GeneID:507116|ZCCHC3:NM_001080234:913_cdna Constitutive 0 NULL GeneID:507116 13 GENE ZCCHC3 MGC142442 zinc finger, CCHC domain containing 3 EMBV3_01060 AATGGACGGACAGCTCTTCTCCTTGACACCATGAGCATAACCTGGACAGTCATCGATCCT Gene GeneID:785982|LOC785982:XM_002690333:8_cdna Constitutive 0 NULL GeneID:785982 9 GENE LOC785982 NULL similar to retinoic acid early transcript 1E EMBV3_12753 ACCATCTTAATAATACAGTCCCGGTAATCTTAGTTTAGGACTGACCGTTCTCATTCTTTG Gene BVT0101_039079 + 0 NULL GK000019.2:9041928-9118007 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098558 1 XLOC_058803 NonCoding TCONS_00098558 XLOC_058803 NonCoding NonCoding - 19:9047026-9048736 - TSS72934 1710 6 TCONS_00098558_2 51 1 0 0 0 0 0 0 0 0 0 0 2.16552195607968e-05 1.33870423974799e-06 0 0 0 0 7.72270715151178e-05 0 0.000337479815401504 0 0 0 8.67915485707323e-05 0.000177043066716058 0 0 0 0 0 3.40674254071387e-05 0.000193375843813242 0 noncoding 0 0 0 0 0.0337185879657288 0.824723017585681 0.00276753417201707 0.951528115139362 AAATTTGCTGTTAAAATGAATATTATTGACTTTTTACTGACTGTTCTTTGAACAAACTGGGACTTTAGATGAGGAGTATGTTGTTTCTATGGAAACTGTATCGTGTTTCTGTCAGTGGATAGACACATGGGTACAGTTGTTTTTCATTTCACAGTGTAGTAATGATGGCCGCTTTTCAAGCCCAAATAAACCATCTTAATAATACAGTCCCGGTAATCTTAGTTTAGGACTGACCGTTCTCATTCTTTGATTCTTCTTGTTTTGTTTTTGGCTAATTCTGCCCATCTTCATTGTCACATTATGGATAACAATAGTATATGTTTGTGCTGGAAAACAGCTCTTAGAATGATCCGTTACAAAGAGATGTATCTTTGTACATGTATTTCATGTATTTCACCATGTCTCCCTTTTCCAATTAATACTACTGTTATTCCCTCTCCTTCGCTTCCTGCTTAGTTCTTTCTCTTAAAACATTAAAACTCCAGTTCATCATATTGTATATATCTTAATTGGAATAAATAGTTGTTTTAAGAATTGTAATGAAAATATAGCAGATGTGCTTTATTTGCTAAAAATGCTACCTTTTTGCCAGTTTTGTATTAATAGTGTGAGTCCTGTATAAGTGTTAGCTATTAGTAGTAGAAGTAATGATGGTGTTATATGTTAATACTATTGTCTAGTATGTTAGAATAATTTCAATAAAAATTGTATTTGAAGCTTTGAGAATGTGACTTTTTCCCCCCTCTTTATTGGTTTAAAAGATTATCTGAAAACTCTCAGAATTACTTTGCTAAATTTGCTTGCAGAGTTCAGTAGTTGCAGCATAAAATACATGGCCCACAAGCCTAAAATACCTGGCTCTTTACAGGAAAAGTTCCTTCCAGCTTCTGGCCAAGAGAGAAAAACCTGCTTTTGTAATTCTTGCTTAAACCTAATTTAAAAATTCAGTTTTGTCATGTTCTCTCTCTCTCGTAGGTGTTTTTGATGGGTAATATCTTGAGTTGTAAGCATAAGAAATACTCTTTTTCAAGTGATATGTTGCTTACACACACATGCTTCAGCAACCATTAGTACAGTTTAATGCTAAGGTGCCCTGTCAGCTTGCCCAGCTGAGAAGAGGAGGCCCTGCTCTGCTTGAACTGCATTTTTTTGTTGTCTCATTGACTCAAAATTGCTTGTTGTAAGAGTTCAGGTAATTGTTCTTGCACTGAAATAATGTTGCATGCAAAGAGCCCATAACAGGTTTTGTTCTAAGTAAGTATTACTGTCTACTCACTGTTTCATTTGTAGATGACATTTCCAAAATCTGTGGATTGTATTCCCCAGTTCTGGGAACCCAGCAGCTCTCAGGCTGCTGCTGGTACCACCAGTGAGGCCCCAGAGGACTGCTCGCTGTGGATACCTGTGTAGTCCTTCCGTGTCTGGTTCCAGCCTGCATCCATGTGGTCGGGAGCTCACCAACTGCAGTTCCTTCCAAGTCAGTTTCTACTCTTTGTAGAATCCAGGTTCCAGGGAGGAAGATTTCTTTCCCTTGATTCAAAATCTCCATTTCCTATCTTGGGATTTATCTTTTATATAAGATGATTGAGAATGAGAATGTTTTCTTTTAAAGGAATTTCCTCTCTTTTCTGCAGGAGGATAACTTCTCCCTCTGCCTCCAATGTTTATGGGCAAACATTGATGTATTTTCCAAAGTCTGGATTGTTCACA TCONS_00095026 . 5' 5005 TCONS_00095026 . 5' 5005 EMBV3_31845 GGCACTGCTGCCCTGGGAGGAATTTATTTGGGAGTTTCAGCCACATTCAACATGTCCCTT Gene GeneID:511440|COX10:NM_001098013:12_cdna Constitutive 0 NULL GeneID:511440 19 GENE COX10 NULL COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast) EMBV3_14201 CCCAACCAGTAGTGCTGAAGAAGCCGAAGCTGAACGGTTCTATGAAGACCTACAAGACCT Gene BVT0102_442604 - 1 EMBV3_06650 GK000022.2:60581501-60590208 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00137171 TCONS_00176610 TCONS_00039701 TCONS_00039767 TCONS_00187603 TCONS_00208726 TCONS_00174335 TCONS_00055895 TCONS_00071076 TCONS_00039719 TCONS_00233738 TCONS_00165870 TCONS_00011807 TCONS_00117105 TCONS_00182156 TCONS_00081116 TCONS_00163589 TCONS_00186773 TCONS_00056519 TCONS_00006773 TCONS_00058747 TCONS_00186044 TCONS_00058748 TCONS_00203896 TCONS_00091562 TCONS_00091999 TCONS_00182152 TCONS_00110059 TCONS_00131899 TCONS_00105203 TCONS_00034093 TCONS_00180787 TCONS_00149642 TCONS_00006998 TCONS_00206965 TCONS_00230673 TCONS_00107343 TCONS_00203891 TCONS_00238496 TCONS_00163585 TCONS_00253923 TCONS_00136498 TCONS_00250286 TCONS_00108871 TCONS_00203890 TCONS_00111752 TCONS_00018605 TCONS_00028152 TCONS_00203889 TCONS_00126816 TCONS_00158297 TCONS_00087988 TCONS_00108979 TCONS_00071191 TCONS_00124547 TCONS_00018601 TCONS_00137884 TCONS_00100460 TCONS_00091512 TCONS_00180789 TCONS_00091543 TCONS_00056840 TCONS_00018602 TCONS_00022229 TCONS_00028150 TCONS_00089514 TCONS_00075204 TCONS_00221082 TCONS_00024277 TCONS_00163588 TCONS_00248828 TCONS_00252677 TCONS_00239426 TCONS_00200750 TCONS_00041066 TCONS_00210711 TCONS_00182155 TCONS_00107920 TCONS_00080878 68 XLOC_083381 XLOC_106384 XLOC_023518 XLOC_023584 XLOC_113648 XLOC_127238 XLOC_104585 XLOC_033703 XLOC_042849 XLOC_023536 XLOC_143219 XLOC_100710 XLOC_007357 XLOC_071271 XLOC_110780 XLOC_049996 XLOC_099945 XLOC_112825 XLOC_034322 XLOC_002335 XLOC_036183 XLOC_112097 XLOC_124292 XLOC_056336 XLOC_056767 XLOC_065963 XLOC_080604 XLOC_062522 XLOC_020326 XLOC_110477 XLOC_091516 XLOC_002560 XLOC_125485 XLOC_140163 XLOC_063254 XLOC_145163 XLOC_156861 XLOC_082709 XLOC_153229 XLOC_064776 XLOC_067652 XLOC_009289 XLOC_015421 XLOC_077503 XLOC_096751 XLOC_052776 XLOC_064884 XLOC_042963 XLOC_076093 XLOC_009288 XLOC_084093 XLOC_060703 XLOC_056286 XLOC_056317 XLOC_034643 XLOC_012900 XLOC_054298 XLOC_046513 XLOC_134398 XLOC_014466 XLOC_151771 XLOC_155618 XLOC_146092 XLOC_122401 XLOC_024877 XLOC_129221 XLOC_063830 XLOC_049760 Coding TCONS_00105203 XLOC_062522 Coding Coding LOC100847305 2:45170859-45293381 = TSS77702 1230 1 TCONS_00105203_2 409 0.739024390243902 4 0.989993552125758 0.00352309358209682 0.00246512610774076 0.00231035912831888 0.00226282635882002 0.00262760639119884 0.00141846111198753 0.00184749652443334 0.00179004253796293 0.00367015744601956 0.0024581621950068 0.00134813638484954 0.001627179530025 0.00134424711173414 0.00299990807889311 0.00197138997745074 0.00907475343178904 0.00523647370048956 0.00700710916814397 0.0034816868497431 0.00346290440644971 0.00117373233604373 0.00419228536899616 0.0029393098055352 0.0051770343522744 0.00264323969485498 0.00322267761944829 0.00287225488809856 0.00145119025480731 0.00178673153169831 0.00332221577106527 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 0.0 1077 94.39 0.564227642276423 TCONS_00105203_2 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 6e-169 491 69.30 0.819070904645477 2 coding ATGGCGATTGATAGTTCTGAGAGATCTGGGGCTAAAGAGGTGGTGCTGTGGTCAGTAGGTGCCCAATATGCTACTGGAGATCAGTGGAGAACTAACTCCAGAAAGAATGAAGGGATGGAGCCAAAGCAAAAACAATACCCAGCTGTGGATGTGACTGGTGATAGAAGCAAGGTCCAATGCTATAAAGAGCAATATTGCACAGGAACCTGTATTGTCAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAAGAGATGGCAAGAGTGAATGTCGACATTCTAGGCATCAGAGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTGAGAAGAAATGGAGTGGCCATCATGGTCAACAAAAGAGTCCGAATTGCAGTACTTGGATGCAATCTCAAAAACTACAGAATAATCTCTGCTCGTTTCCAAGGCAAACCATTCAATATCACAGTAATCCAAGTCTATGCCCCAACCAGTAATGCTGAAGAAGCTGAAGTTGAACGGTTCTATGAAGACCTACAAGATCTTTTAGAACTAACACCCAAAAAAGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGGAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAATATGGAATGAAGCAGGGCAAAGACTAATAGAGTTTTGCCAAGAAAATGCACTTGTCATAACAAACACCCTCTTCCAACAACACAAGAGAAGACTCTACACATGGACATCACCAGATGGTCAACACCGAAATCAGACTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGTTCAGACCATGAACTCCTTATTGCCAAATTCAGACTGAAATTGAAGAAAGTAGGGAAAACCACTAGACCATTCAGAAGAAATGTGATCTGCTATGACAGATTAAAAAGCCTATTGGCATGTAACAACCAGCAAAATCCTGATGTACTATTTAGCTACCCAACCAATACTTCACCTCTTTTGAAAATGAACTACAGGATACTGTTTGTTTCTCAGAGCATCTCAGGCTGGATACAACAGCAGGACGTGGGGATGGCAGAGGACAATGGAAGAACTATGGGGAATGTCACTGTAGACTATGGAGCTGTGAGTGATGACAGTCGTCACTACATCATGTGTGGCATTTAA EMBV3_09336 CTCCAGTGTCTCCAGTACCAGTTTTACCAGCCAATCAACAACGCTGACTTCATAGTGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11723 GCGTCCTGAGCACACAGTTCCTGGGGCCTTCCTTTTGTTTTAAGTGACCTGGGTTCGAAT Gene BVT0102_050111 + 0 NULL GK000011.2:98654752-98718501 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033989 1 XLOC_020222 NonCoding TCONS_00033989 XLOC_020222 NonCoding NonCoding - 11:98665177-98665437 - TSS24988 260 0.242307692307692 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00199886162593062 0 0 0 0 0 0 XR_227175.1 LOC101903554 PREDICTED: Bos taurus uncharacterized LOC101903554 (LOC101903554), 2e-40 168 100.00 0.353846153846154 0 noncoding 0 0 0 0 -0.0973478771430569 0.458246186358769 0.0172922998003102 0.7553275270092 CTGAATTCAATCCCTCGTCGGGGAACTAAGATCCTGCAAGGGGCAGAGCTGGAAAAAAAAAAAAAAGAAAGAAAGGAATTTAGCCTCTTTAACTTTTCCTTCTCTCCTTGCCACAGGTATCTCAAGATGCGTCCTGAGCACACAGTTCCTGGGGCCTTCCTTTTGTTTTAAGTGACCTGGGTTCAAATCCCAGCCCTATTGCTTCCAGTAAGTTATTAACCATTTTCAGTGTCCTCACCCATAAAACAGAGATAATGACA TCONS_00029038 TCONS_00029039 . 5' 10427 TCONS_00029038 TCONS_00029039 . 5' 10427 EMBV3_08931 CTCGGAAGAGATGCTGTGGAATCCATCGAGAAAATCAGCAAGGTGGAGTGTGGATTTGCC Gene GeneID:513253|EDEM2:NM_001101085:1021_cdna UTR3_Alt 2 NULL GeneID:513253 13 GENE EDEM2 NULL ER degradation enhancer, mannosidase alpha-like 2 EMBV3_03001 AGCACCTTCTCTGGATTTCTAGTGTATTCTGACTGGCACAACTCCCCTGTCTTCGCTTGA Gene GeneID:614671|C1QTNF5:NM_001099138:222_cdna Constitutive 0 NULL GeneID:614671 15 GENE C1QTNF5 MGC160096 C1q and tumor necrosis factor related protein 5 EMBV3_36516 CAGACCCATGTGGGGGCTTGTGCCAAAAACGTATCAGTTGCTGCTTAGATGGGATTCTTT Gene GeneID:100297334|LOC100297334:XM_002699827:90_cdna Constitutive 0 NULL GeneID:100297334 X GENE LOC100297334 NULL similar to armadillo repeat containing, X-linked 1 EMBV3_13956 GTTTGACTATGGTGACCGCTTCTGGGACATCAAAAGCAAGTACTTCACCTGCCAGTGTGG Gene GeneID:514062|EHMT2:XM_002697345:302_cdna Constitutive 0 NULL GeneID:514062 23 GENE EHMT2 BAT8 euchromatic histone-lysine N-methyltransferase 2 EMBV3_40983 GTGTTAATTCCTGTAAAACAGTTTCCTAAGGAAGAAGAGTTGAGGAAAAGTGGAGAAGCA Variant GeneID:615095|KHDRBS3:NM_001083512:23_cdna 216^332 2 EMBV3_17614 GeneID:615095 14 GENE KHDRBS3 MGC142791 KH domain containing, RNA binding, signal transduction associated 3 EMBV3_02569 TGTTCACCGAGCCTTGTGCATGCTGCAGTCTCATCCTTTATGAGCACCTGACTGCTCAAA Gene BVV0102_043180 + 0 NULL GK000014.2:46182982-46336281 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16482 AGGCCTGGTTGACTCCAGGGTCCATGTGCTTTTACACGCCACTGTCTCTTTAATGAAGGG Gene GeneID:525034|KRT74:NM_001083447:21_cdna Constitutive 0 NULL GeneID:525034 5 GENE KRT74 MGC151724 keratin 74 EMBV3_02839 AACTGTATGAGCGAACTGACAGAACTGGGGACGCAGGACACTAGAGCTGGGAACCTCTGT Gene BVV0102_139540 + 0 NULL GK000025.2:41453954-41480284 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147442 TCONS_00147443 1 XLOC_089373 NonCoding TCONS_00147442 XLOC_089373 NonCoding NonCoding - 25:41477064-41478528 - TSS110009 670 1 TCONS_00147442_1 82 0.707462686567164 3 0.544087491455913 2.06061910731047e-09 7.49822051421616e-05 0.000165738407896312 4.95722232377107e-05 0.00078847154869497 5.33721517966747e-06 0.000121853815687357 0.000361942532060267 9.42063726748515e-05 7.98307392291401e-05 0 0 0 0.000224666253994874 2.01813438400601e-10 0 0 0 0.000192650773467447 2.62076252785517e-08 1.04978680570663e-09 0 0 0 4.13603712202296e-05 0.000368042615629219 7.87017319095231e-05 0 0 8.97009288120463e-06 0 noncoding AATATACTCCGCCTGAAGCCCACCCTCAGAAGTTCTGATTTAATTGGTCTCAGGAAAAAGAGAACTGTATGAGCGAACTGACAGAACTGGGGACGCAGGACGCTGGAGCTGGGAACCTCTGTGCAGGCTCGATCACGCTGCAGTGACAATCTCCAGTCTCAGAGGCCAGAAACAACAGAGTTGTATTCAGCATCAGCCCTCGGAAAGCCAGGGTGAGAGCACAGCCTCCACTCTGGAGTTCTGCCCTCCTGACAAAGGGGAAGTGCTCGGAGCGTCTAACTGCTCTGGCTCAGAATCACCACAAGGCTTCACCTCACGACTCACTGGCCAGAACCAGTCATGGCTATACCCAACCACAACTGGAACATTTTACTATGCCCCTGGAAGACAGCCAGCCAGAAACGCCTGATAAACAGCACTAAATGCTAACCACACTAACCAAGCTAACATTTACTGAACATGCCTGTTATGTACTGAGCACTCTTACATATGCCTTTTTCTTAGAAACTCATCGACTCCTCACAATAAATCTAGAAAATAGTAGTATGATTATCTCCATTTTGGCCAGAAAAGTTCAACCCTCTAAGACCCCACAGCTAGTCGATAAAAGATCTGGGGTTCCAATCCACACTGTCTGGTGTGAGACCATCCTCAGAGGCCCTGCGGCACT TCONS_00145644 r 5' 2656 TCONS_00145644 r 5' 1736 EMBV3_40297 GCAAGATTGGAAGGGAGACATCACTTGACCACCAAAGGACCTCAGATCTTAGCTTATGGC Gene BVT0102_225763 + 0 NULL GK000002.2:49736400-50015154 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22491 TGTCATGCTGTAGGCCTGGAGAGAGGAGGTTTGAGGGTGGGCATGTGCTGAACAGAATTA Gene BVV0102_024986 + 0 NULL GK000019.2:51582098-51585608 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094394 TCONS_00094393 TCONS_00094395 TCONS_00094391 TCONS_00097651 TCONS_00094388 TCONS_00094387 TCONS_00094392 TCONS_00094390 2 XLOC_057435 XLOC_058300 Coding TCONS_00094392 XLOC_057435 Coding Coding MAFG 19:51577255-51585490 j TSS70609 4954 2 TCONS_00094392_7 217 3 0.398712654845761 0.00710422915688015 0.0055980607464077 0.00923633744215907 0.0048537924331153 0.00716598163899507 0.00170684928135686 0.00496635695670716 0.00662730974441886 0.000124161232173915 0.0023408214837774 0.000504995750910129 0.000157647134675094 0.00183521069178139 0.00176184002699483 0.00180258079220962 0.00429387788025816 0.00339281558800572 0.000257028156964686 0.0104694332901054 0.00122957635810553 0.00733271542174357 0.00096896708435569 0.00139191368707511 0.000822608415234721 0.0138561255562294 0.013004772537733 0.00865526546977364 0.000542939103355648 0.000180897676506827 2.22138153786241e-11 XM_005221043.1 MAFG PREDICTED: Bos taurus v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian) (MAFG), transcript variant X1, mRNA. 0.0 8863 100.00 0.991723859507469 NM_002359.3 MAFG Homo sapiens v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G (MAFG), transcript variant 1, mRNA. 0.0 2354 74.64 0.747073072264837 TCONS_00094392_2 sp|A5PJV0|MAFG_BOVIN MAFG_BOVIN Transcription factor MafG; 3e-113 323 100.00 0.930635838150289 1 coding 0 0 0 0 -0.988548746427827 0.0107386221895783 -0.23525412752687 0.0507480222298202 ACCAGAGCCCAGAGGGAGACTTGCTGAGTCATCAGCATGAGAGTGCCTGCTTGCTGTGCCCTCCGGGTTATGACGACCCCCAATAAAGGAAACAAGGCCTTGAAGGTGAAGCGGGAGCCAGGAGAGAATGGCACCAGCCTGACGGACGAGGAGCTGGTGACCATGTCGGTGCGGGAGCTGAACCAGCACCTGCGGGGCCTGTCGAAGGAGGAGATCATCCAGCTGAAGCAGCGCCGGCGCACGCTCAAGAACCGCGGCTATGCCGCCAGCTGCCGTGTGAAGCGGGTGACCCAGAAGGAGGAGCTGGAAAAGCAGAAGGCGGAGCTGCAGCAGGAGGTGGAGAAGCTGGCCTCCGAGAATGCCAGCATGAAGCTGGAGCTCGATGCCCTGCGCTCCAAGTACGAGGCCCTGCAGAACTTCGCCAGGACCGTGGCCCGAAGCCCTGTGGCGCCAGCTCGGGGTCCCCTTGCTGCTGGCTTGGGGCCCCTCGTCCCTGGCAAGGTGGCTGCCACCAGCGTCATCACAATAGTAAAGTCCAAGACGGACGCCCGGTCGTAGGGACACACTTGGCCAGGCGGGTCTGCAAGGGGCCAGTAGGCGCATGGCAAATTCGGCAGCCCTGTCCCCTTCTTCCTCCCTCCTCTTCCTCTTCTCTCCTTTTCTTCCTCTCCTACCTCCTCCCTTCCCCGCAAAGCACAACCTGCACCCCAGGGGCGCTGGGCTGAGCCCCTTCGATCTCGTCTTTGTCATCGTGTGTTTTGTACGTTGGGATTGGTCAGTTTGGCGGTGACGTGGGGTCGCTCCCACCCCCTGTGTACCACGGGCAGATGGGCTTGGAGTCTAGAGTCAGCCTGTGGGAGTAAACAGAGGAAGATCAAGCGGGTTCTCGGGCATGGGTGTCCCCGAGCACGGAGGGCTGCAGGGCAAGAGAGGCTGTTCTCACTACGGAGTGGCCCACAGGCTCTGACGGCCACCAGGTTAGCAGGAGGCCAGGAGGTTCATTCTCAGCCCAGCCCACAGGCCTGGACAGAATTGGCTGTTCCCGAGAGCCCTGGATGGGCGGGCCACCAGTCTGGCGCTAGGGGGATGGGGCGTTGTGTGGCTGTGGGCCAGGGGCCTTGGCACTCACGCCTGACGTGTTGCACTGAACAAGACCAAATCACTGGTTGTGAGCGTGAAGGGTGTGTCCAGTGTCCTTCGATGGGTCCCGTGTCACTGTTTACATGACCTGTTTGTGTGGTTACATAGCCCTTTATTTAAAAGAGAGAAGTTCCTTTTACGAAGTTATTAAATTATATGTTTAAAAGCTAGAGAAAAAAAAAAGCTGCAGAGTATTTATAAAACTGTCTTTTTAAAAAAACAAAAAAGCAAGAACATTTGACCATATACATGGAAAAGGGAAGAAAGTATAATAGAAACTTTGCTAGTTTAAAAAAAAGAAAAAAACAAAAAAATCCTTTCTTGTAAACTTACAGACAAGTCTTTGTGGCTGTTGGAGTTTAGTTTTTATATACACAGAGTTATCAGACGTTATTTATAAAACTTAGTTTAAAAAAAAAAAGACAAAAAAAAAAAAAAGCCAAGCCGCGAGCGACCGGAAGGCGCGTCCTGACGTCCTCCCTGCTATCTCTTTTGCAATTGTACCGAAAGTGACTTACTCCCTTGCCCCTTCCTGCTTCCGTCTCTTGCCGGTGCCGTGGTGTCGTCCGTGCCTGGTGAGGTCTTGTGCAGCGTCACGTGCTGGTGCTTCTGGTGACCTTTGACCTGTGGGTGTCACTTCTTGTGTCTGTTCTCCCGTGTTTGTTTTTTTGGATTTGGTTGTGGTTTTGCTTCTGCTGACTTGTCAGGCCCAGGCTATTGTGCCGGGCTGCGCCTGCTCCAGTGGAGCTTGGGGGTCTGCGCCGCCAGCCCTGCCTCTTCTGCTTTGGCACTCACCTTGAGCCCCAGGGCCGGGGTGGGGGGGTCAGTTGCAGGGTTCTGCCATACCCCTGTCTGACCCTTGGCTTCGCATGTGTGTCTCAGGCTTGGGCTGATCCAGCGGCAGTGTAGGTGAAACTGGGGGCCATCCTGGGTGCCCCCCCTGGCTCCCCGCACTACTTCCTTATCCTCGGCCTCTGGCCCTGGGTCGGGGCTCGCACGGATCAAGGAGTCACTGTGGGTGCCCACCAGGCCAGGGCCAAGCTGCCCCTGGCTGTCTTCCTTCTGGCCTCCAGTCACCGTGTTTGGGCTCCAACCACCAATCTGAGATTTGTTTTTGTGGGTTTCAGGTGGGCCTCAGCAGGGGAAGCCCAGGGACCCACTGCCCACTCATCCCAGAGCTGTTTCCATGCTGCGGGACGGTGCTTCCCAGGCAGAGCCAGGTGGTTTCGGGGCCCACCTGGAGCAGCCCCTTCTCCTTGCCTGAAGGCCTGGGGGTCCCCACCAGTGCCAGACAAGGGCTATGGTCTCTGGGGCTAGGTCCTGTCCCTCCTCTCCCCCCGAACATGCTGGCAGCTCTTGGCTTTGGGCCTTCTTTCACCACCCTTTGGGGTCTGTGTCTTCCAGGGATCCGCTGCTCGGCTTGTGGAGGTGCTTCCCCAGGGCTGAGCCCACCTTCCCATCATGGCCACTCAGTGAGGCAGCCAGTCTCAGACTTGGCTTGGGCAGCTGCTTGTAGGCACGTGATGGGGGCTGCCTGTGGTGCCTGCCCCTCCCGCCCCCCAAGAGGCTACTCCTCTGGCTCTGGCCATGTGGGGCTTGGCTACTACTTGGGGTCGCTGGTTGGCTTCTCTGGGGGCCTGAAGCCCTCGAAAAAGCACAGAAGTGGGCTAGTGAAAAGAAAAACAATGTGGCCTGGCAGGGTTAACCTTGTGGACAGTAGGATCTTCATCCCTGAGTTTGACGCAGCATGCCCAAACTCTGGGGAATTTGGGCTGTCAACTGTTGTCTTGATGGGCTTGATCTTGACCCTAGACACTCAGAGACATTCCTGGCTATACCCAGGTTGGCCTGCAGTAGAGATTTTGACCATTGACTCTGAATCACTTAGTGGCTTCCTTTGGCTCCCTGCAGTCTGGCTTTGTCTACCTAAGGTCCAGAAGAGAGTGGTTGATGTTGCTTGTAGCAGCAAGTTGGAATCACATCATAAGAATCCCTAAAGAGAGATCATGCCCTGTCCTGAACAAGGAGAGGGACAGGCTCTCCGTGTCCAAGTACAGTCCCCACTTTTGTTCAGAGGTGGGGCCTCCATCTCTGTGCACTGCTGTCATGCTGTAGACCTGGAGAGAGGAGGTTTGAGGGTGGGCATGTGCTGAACAGAATTACAGGTCCTTGGTTTGGTTTATAGACGCGTCTGGAGTTAGGCTGTGCTTCCTTTTGAGGTTTTTGGATTTGGAGCGACTCTTCCTTGGATCTGGGGAGCATTCTGCTCCCCTTAAGCCAGCCTCTTGGGGCTGCTCTGCCCCTCCCCCACTTCACTTTGGTTCTTGACAGTAGATCCTGTGTCCACATGTGGCTGTTTGGTGTCTTTTTGATTCTTGTTAATTCATTTTTCCTACTGTGAGTGTGTCATGTTCTCTTTCTCCTCAACTTTTTGACACAGCGAATTGAGGACTTTGGCCCAGGCCAGGTCTCCCAAACTTGTCCGCTAAGTAAACCATAATGTGCACCTTCCTTTACACTTTGCCCTCGCCCAGTCTTCCCTTATCCCGACATGGACACTGAGATTTCAGAGGCGAACCCTTTGGGAACAGGTCAGCTCCTGCCCAAAGTTATGGCTCCAGGGAGCCCTCCCCGTGGCTCTTGGCCACTGCTCCAGGTAGCACTCACTGCATTGGAGAAGCTGTGGCTGCTGGGTGGTGTGCTGGTTTCTGCCAGGTGCCAGGTCTCCCTGGAGGCTTTTCTACTCTTGGTCCAGGCCTCCAGGTCTGGGCACAACCCTGACCATCAGCAGCAGCCTCAGTGGTTGGTGCCTGGGCCTGCAGCTCTGATCCGCTGCAGCCTGCTTTGGGACATATGGTCAAGCCCCATCGTGTCACTGCTGCTTCCTTCTCTGGAGTGGCTGGTTGGCTGAAGCTTCCGTCCACAGCTGGGAAGCCACAGCCTGCAGCACTGTTTCCGCTCTAGGATCTTGTAAGTTACTTTTTTAGGCTGTGGTTTGGTGAAAGGAACCAACACATTAACGATTTTTCCCCCCCAGAAGCCACTGAATAATTCTTTCTGGCAGGTTTTTGCCTTCCAGTTAGCTGTCTGGTTTTGAAGCGGATGGGAAGAGGCAAGGGTGTGCCCTGGAGACTGGTAACTTGTCTTGCTCTGGTCTGTGTCCTGAGCATGTGCTATACTTGTTGGACCAGTCGCACACATTTCCACCCCACCCTGGAGCAGCAGCCTTGGTACGTGGGTGTCCCTCCAGTTTGAGCTGGAGTGTTAGGAGAGCCGTCCCTAGTGACCTGTGAAGGGGGACCCCTCTAACAACCTTGTGTCCCAGCCCCACCCTCTCCACATCCCCTCAAACTGCTAGTCCCTGAAGCCTTTAACCAAACGGGAGTGGGTACAGAAAACCTTCTCCTGGCATCTTACGGCAGCAGGATAAGGGCTGTCCAGTGTGTCCAGCTCTGCTGCTCTCCTGGCGCTGAGAAGGTGGGCCAAGCAGAGTTGATCAGATCCTACCTGCCCCGCCTAAGGCTAAAGACAGGAAGTGGGGGAGGGGGGCGGGGGTACGCTGGGATCTGCCGGGGCGGGCGGGGGTTGTTGAAGATCCAGGTTGGGAAGGGCCTCACTGGGGCACCCTGGCTGACCTGGGCGGCCGCGGCCTCGTGCCCTCCCTGCCCTGTGCAGTATTTATTGCTAAATTATTGTCCAGGAGGGGCGGCACTGGGCCAGGCCCCGGGTATTTATTGCTGTACATAGTGTATGTTTGTGATATATAAGGTTTTCTTTATTTTGTATATGATCAATAAACACCTTTTAAAGAGAC EMBV3_00261 TTCAGAATTATTTTCCACATTGAAACAGTTGATGTACTATAGTGTATGTCTCCTACCTAG Gene GeneID:615937|RAD51AP1:NM_001076403:49_cdna Constitutive 0 NULL GeneID:615937 5 GENE RAD51AP1 NULL RAD51 associated protein 1 EMBV3_00543 CTTCTCAAGGTTTTCTGGTTAGGGAAGCTTGCATCTGTGTTCTGGTGGGTGGAGCTGGAT Gene BVV0102_004273 - 1 EMBV3_35352 GK000006.2:4152762-4364284 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023646 TCONS_00188225 TCONS_00030202 TCONS_00167653 TCONS_00071185 5 XLOC_014313 XLOC_114268 XLOC_016457 XLOC_102489 XLOC_042957 NonCoding TCONS_00023646 XLOC_014313 NonCoding NonCoding - 10:104108175-104109063 - TSS17536 888 3 TCONS_00023646_2 68 0.996621621621622 1 0 0 0 0 0 0 4.02821816122904e-07 0 0 0 0 0 4.29893868962395e-05 0 1.32431933609243e-06 2.02583360789158e-06 3.71784806495491e-06 0.00191013577704982 0.00122063614623734 0 3.50932343681453e-06 0 1.19380260028846e-06 0.000294436314721643 5.66374094866691e-05 0 9.91761517468598e-07 1.19499741920863e-05 4.44684141578623e-05 1.14804724406246e-05 1.12842431946245e-06 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 2e-22 111 68.22 0.402027027027027 0 noncoding GTTCCTCTTTATTGTGGAGGTTCCTCCTTGTGGGTGGGGTTGGATGAGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCAGTGTTCTGGTGGGTGGAGCTGGATCTCCTCTCTCTGGAGTGCAATTAAGTGTGCAGTAGTGAGTTTTGAGGTGTCTATGGGTTTGGTGTGATTTTTGGGCACCCCTATTTTAATGCTCAGGGTTATGTTCCTGCATTGTTGGAGAATTAGCTTGGTATGTCTTTCTCTGAAACTTGTTGGCTCTTGGGTAGAGCTTGGTTTCAGTGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCAACTGATGTTCCCTGGAGTCAGGAGTTTTCTGGAGTTCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGTCTCAAGACTTCTCTATCCATACAGCACTGATGATAAAACATCTAGGTTAATGGTGAAAAGATTCTCCACAGTGAGGGACACCCAGAGAGGTTCACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGGTGACCAGGAGGAGAAGAGGGGGAGTCAAAAGGAGAGAGACAGATCTAGCCAGTAATCAGTTCCCTAAATGTTCTCCACAGCCCAGAACACCCAAAAAGATTCACAGAGTTGGGTAGAGAAGAGAAGGGGGAGGGAGGAGATAAAGGTGACCTTGGGGAGAAAAAGGAGAGTCAAAAAGGGGGACAGAGCAATCAAGCCAGTAATCACACTCCTAAGTAAAAATGGGTACTGAAGATTGGATTCTTAAAGGTACAAAATTGATAACAAAAACCAAAAGGCAAAGATTAAAAATCTAGAGTAGAGGTTAGACTCTCAAAAATACAATATTAAA TCONS_00018597 . 5' 8990 TCONS_00018597 . 5' 8990 EMBV3_03472 CCTATGGACTACAGGATACGAGGCTTCCCTGTCCCTCATCATGTACCATAGTTAACCTGA Gene BVV0102_171359 + 0 NULL GK000008.2:32372637-32666689 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10975 TCTACCGCGCCGCCCAGATCATCCTCAACTGACCTGCTGCAGTCAGAGTCAACCTCCCAG Variant GeneID:515034|IRAK2:NM_001075696:110_cdna 319^465 1 EMBV3_03088 GeneID:515034 22 GENE IRAK2 IRAK-2 interleukin-1 receptor-associated kinase 2 EMBV3_30860 GCAAGATCAACCGCGACCTCTTTGACTTCTCCACACGCATCATCACACACCCAACCAAGT Gene GeneID:533356|WDR18:NM_001034588:77_cdna Constitutive 0 NULL GeneID:533356 7 GENE WDR18 MGC128350 WD repeat domain 18 EMBV3_26689 CGCCAGATGGGGCTAGACACATGCACAAAAGCTTTTGTTTTGGCCAAAGTTGACCGCTAC Gene GeneID:513412|JAM3:NM_001105364:2_cdna Constitutive 2 NULL GeneID:513412 29 GENE JAM3 MGC140154 junctional adhesion molecule 3 EMBV3_12328 TTTTCATGTTAATCCCAGGACCTCTATAACTTTTGGGTTTTGGCGGGATGGGGGGCGGTG Gene GeneID:617717|NG5:NM_001076947:213_cdna Constitutive 0 NULL GeneID:617717 23 GENE NG5 MGC143111 NG5 EMBV3_21278 TGTCAGTGCATCGGGAGGCTGGGGCGCAGTCGAGGCGAGACTCATGGGGTGATGACAACT Gene GeneID:515247|SCYL1:NM_001102021:12_cdna Constitutive 0 NULL GeneID:515247 29 GENE SCYL1 MGC165975 SCY1-like 1 (S. cerevisiae) EMBV3_15045 GGAGATGGGCCAGTCTAAACCTCCATGATGAGCTGTTGTAAATTGACGGCGTGTGAGAAG Gene GeneID:507646|TM4SF4:NM_001034306:20_cdna Constitutive 0 NULL GeneID:507646 1 GENE TM4SF4 MGC128809 transmembrane 4 L six family member 4 EMBV3_16059 CGAGAAGGATGTTGATTGAATTGTTAACTGTGGTTGCCTCCAGGGATGGAATTTTGCATT Gene BVV0101_011495 + 0 NULL GK000010.2:45886881-45899488 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013767 1 XLOC_008195 NonCoding TCONS_00013767 XLOC_008195 NonCoding NonCoding - 10:45893774-45896600 - TSS10138 2826 1 TCONS_00013767_3 122 0.129511677282378 1 0 4.28410817397732e-05 2.68333795159735e-14 1.08325066724605e-05 0 0 0 0 6.1819312338375e-06 6.96034503851552e-06 2.95619216153321e-05 6.47691776944531e-06 0 0 1.66453691521855e-06 0.000128470927790635 0.000157054835327674 0 2.66357738446748e-05 1.70885954737101e-14 3.05367870887686e-05 0 0.000280967155838751 0.000434346645990238 0.000255088137909609 7.23506455524144e-05 2.90479230425089e-05 5.53804576651915e-13 0.000139352648879978 3.95101680589117e-05 0.000197854700584087 XM_005254610.1 SNX1 PREDICTED: Homo sapiens sorting nexin 1 (SNX1), transcript variant 9e-121 439 74.33 0.267162066525124 0 noncoding 0 0 0 0 -0.083524051624015 0.481027773690876 0.031197281400484 0.620786670059363 GTTTATGATTATAAAAATAATATACAAATTCCAAGCAATATCAGATAGTATAAAAATTTTAAATAATGCAAAATTCCATCCCTGGAGGCAACCACAGTTAACAATTCAATCAACATCCTTCTCGTATATATATATAATTTTATATAAATGCAGACCATATCATACATGTAATTCTGTAACCTATTCTTACTCAAAAATGAGTTTTTCTTGCCAATGAATATAGCTGTATATCATCTTCAATGACTGTATAAAATCTAATTGCATTATGTACCATAATTCATTTAATCCCTTCCTGCTGTACATTAGATTGATTTCAAATTTTACAGCTGTAAACAATGCTATGATGGGCTTCTTTGCATAGCCATCTTCATGGACTTGGGTTTCTAGAAGTGTCTATGGGAATCCCCAGGGAGTGTCCTGACACACCAACCAGTGCCCTCGTCTCTATTTACTCACACTTTCATCCACAATACGGAAGGCTGGCTGTTTCAGACAGGTGTAAGTTTAAGATTGAAGGGAGGGACGAGGGCCTGAGATAGGGCGCTTCAGGTGCAAAGGCCACCGATAATAAAGGCTTCTTACGCTACACAGCAGTGAGGAAGGAAGGAGCGTATGTGGAGTCTGTTTCCGTGAGGTACGCACGCTGCTGTGAAGGACTAGGAGATAAACAGGGAACGGCGAGCTGGAGTCCTCTCACAGCAGGCTGTGAAGGCCAGGTGGCAGAGCCCACTGTTGGAGCTCATTCAACAGTTACCTACACAGCACCTATTTAAAGCCCAGATATTTTCAGGAGTCACAAGGTTAAAGAGACGTTCCACTTTGGAGAGTTTATTGTCTTAATTTTTTTTTTATGCCTTAAATTGCTTTTTGTGTTTCAGTCACCTGTCTCATCGCGTCCTGTTCTTTGTAGCCATCGCGTTCCTATGGATACCCTAAGGCCCAAATTAAATATTACAGAATTTTTGTTTGGCAGAGATTGCCAACATTAAGCCACACAACTGGTATCACAAGACATTGGCAGGTGATGGCGCACCAACCCCGGGGCCAGAAGACAAGGGTGAGTTGTTCTAGCGCATTTCTAATTCTGAGCTCTGACCCAACTCTTCCCCAACGCGGAGCTGAGACTCTTAGCCAGTGCCTCATTAAGGCAGAGTGTCCTGTTCAGGCATGGGTCAAATGTAGGAAAGGAGGGAATCACCATTCTCTTCCTTTTCTACTCCTCCCCCTCCCAAAGGCTGCTGGGAACTGGTGGGGAAAATCCCACCACCTTAGGGTCTGCTGTTCCTCAGAATCCATGGTTTCCAATCCCACGTGGGCTCTAAACATGCTCAGCAAAGGACACTCCTTCTATCGCCACGCTCCTTTCTCAACCAGTTCCTGGCCCCATCTTTAGATTTCCATTATCTTCTCATGATTTTTCAAATTTGAGATGCCCAGGCATTCTTTAGGCTTCTCAGCTACATTCATTTCTGAATGAAAATCACTCAGAAAGAGCTCAGTGTTACAAATATCCATGTGTAACGCTTCCTATCATTTCTACTTCTTGCATTTGTTCTGTTGCTGAAGACCCATTCTGAATGCTGGGGTCTCTTCAGCTCTAAGCCCTCACCTTCAGGACTCCGAAGCCCAGAGATGCATGGGGGAAATAACCCACAGGGAAGCAGGAGAAGTAAGACTCATTTCCACACCTCTTCTGTAAACCACTTGACTCAAATAGGTCAACAAGATAGCCGTGTCTGAGAACATCTGGATTGCCATACAGTTAATCTTTCTTACCCAGCCCCAGCAGCAAGGCTCCCGCACTGTGCGTTTTGCATTTGCTCCCAGACATGGATGATGGCTATTCCCTTTCTCTCCTCTGAATTCTATTAACATGTTAGGTCTGACATGCCTTTAAATGAAACAAAGCCAGCTTTGACTTTGCATCTCCCTTACCTCTCGGCACAGTCCTCCCTTTTCATTCAGACGAGCCTCTTATATGAATGACGCGGTCATGCACTTGCTGTCACCGCTGCTTCCCCGCCCATTTGCTCCAAACCTATTTGGCCTCCTGTGCTACCTATGTCATGACCATTGTCACCATCTACCCTGAAATGCAGGTCAGAAGCTCATGGGTCATGCCAGCTACCACTCTCTTCCTCAGGCCTTTCGTCGTATCAGTGAGCAGCCCCCAGGGGCTCTTTGCTGCCACTGACTCCTCTCCCTGAGCCTGGACTCCATTACTACTACCCTCCTCAGCACTCTGGCTGACTCTCTGTGCCTCCAGCCTTGTATCTTCTGATGTGTCTACATCACAAATGTGACCATGCGATCTCCTGCTTAAGTCCTTCCAGGAGCTCCCCACACCTGCAGGGTCATGCTCAAAGAGCACCACAGGTGACAGGCACGGTGTGACCCAGCTCTTGCCACCACTCCATGGGCCGTCCACTGACTTGACCTGGCCACATCCAGCTCCTGCTCACCACTGGGCCGTCCACTGACTTGACCTGGCCACATCCAGCTCCTGCCACCACTCCATGGGCCGTCCACTGACTTGACCTGGCCACATCCAGCTCCTGCTCACCACTCCATGGGCCGTCCACTGACTTGACCTGGCCACATCCAGCTCCTGCCACCACTCCATGGGCCGTCCACTGACTTGACCTGGCCACTCAAGCCACTGGTATTCCCTAGGTGGGCCCACCTCTCACGACATGACACAGGAAGGCAGACGGTCCCACGGAAGGAACAAAAACCTCTTCACCTTGAAGACACAGTTCAAGCATCCCCTTCTCCAATTTTTTCCTCCTGAGTCTCCAAGTGGAACAACTCCATCATTGTGGCCCT TCONS_00017108 TCONS_00017109 TCONS_00017110 TCONS_00017111 TCONS_00017112 TCONS_00017113 r 3' 2418 TCONS_00017108 TCONS_00017109 TCONS_00017110 TCONS_00017111 TCONS_00017112 TCONS_00017113 r 3' 5243 EMBV3_36816 ATGGCTGTAACAACTGACTTGACAATTGAGAGGGAATATGGAATGAACCTGGATCAAAGA Gene GeneID:100337475|LOC100337475:XM_002695264:272_cdna Constitutive 0 NULL GeneID:100337475 18 GENE LOC100337475 NULL ribosomal protein SA-like EMBV3_42046 AAGTTTCTGTTACTCATTTATCCTGCGTGGTTGTCTGTGAAGAGGCGGGTCCCACGTGAG Gene GeneID:511328|B4GALT4:NM_001038078:59_cdna Constitutive 0 NULL GeneID:511328 1 GENE B4GALT4 MGC133851 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 EMBV3_36588 TAGGCCCCACCCCGTGCCTGACTATGAGCTAAGGAGGCCCATGTTGCTGCCCGTGTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19139 GTGATATCATGGCTTACTGCCCCATTCTCCCAATTCTTCATGAACATTGAACTTGCCTCC Gene BVT0101_005539 + 1 EMBV3_09678 GK000016.2:75000063-75069689 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074281 1 XLOC_046037 NonCoding TCONS_00074281 XLOC_046037 NonCoding NonCoding - 16:75001460-75002992 - TSS56125 1532 2 TCONS_00074281_7 98 1 0 0 0 0 3.79433141703437e-05 6.44539810834349e-05 5.60374365108146e-05 1.90330172478997e-06 0 0 1.07428180321208e-05 5.22985916779645e-05 0.000116700015760026 0 0 1.60124115220198e-05 0.000103439791129682 0.000552686225224133 8.18895475034437e-05 0 0 0 0.0012811800215634 5.38946481159251e-05 6.56577331363727e-05 0 0 0 6.26969827877433e-06 1.90128207112354e-05 0.000313955304287105 XM_005217393.1 SERTAD4 PREDICTED: Bos taurus SERTA domain containing 4 (SERTAD4), 0.0 2764 100.00 0.99934725848564 0 noncoding 0 0 0 0 0.0402748677603516 0.703898966144431 0.00744344424983902 0.90561822025234 AGTGTGTTTATATTTTAATGACTTATCCTTGTATAGTTTTTTGGTTAAGGATTTCAGTGTTTCTATTTGTTAGTATTGTTTCCAGCACATGAAATTCTACTCTTATGCATCTGAGCTTGAATCATGGCATAATAGTTTTTATCTTGGCTATTTGTTTCTTTCTTTTATACTATCTAGTTTCAGTAAGTTTTTTTTTTTTTTTGAATGGGAAACTTTTACACACAAAATCCTCAACTGGAGAGGCTGAGTTCCACAAGTACTTTATATTAAAGTCTGAATAAAAAATAAATGAGTTGGAATTATTTGGGAGCGGGGAGGAAATTTTGCAATTGAGTCTTCCTAGTCGATTTAGAACTTACACTGGGATGTTAGCAAATTAAGGAGGCAAGTTCAATGTTCATGAAGAATTGGGAGAATGGGGCAGTAAGCCATGATATCACATGATCGTTTTATTTGTATTTTGTGTACACATCCGAACTGTCATTTTTTTCTCAGTGAGATTTACATTGTAATTCTGCTACTGAGTTCAGAAGTTGAAATTCACAAATGTATGAGCTGTGAATACTAGATAAAGTCACAGAGATGCACATTTATGGTAGTTTTTTTTTTTTTTTAACATCAGAGGTGAGTGGATGCAAAAGAAAGGTGTTAAAGTGTGTTTTGTCTATAAGAGGGTTTAAAAAATAAAAACTAGAAAGCCCTTAATCTTTTCTCCTCAGGCTCCTGCATGTCTGCTTTGTCAGCCAAGGTAGCAGAATGACAGCTCAAGCATTCCCCAAAGGCCCAGGGCTAAAGTGTCAAGTTTTGCCAGCAAGTGTTCACAGTCAAGTTACCAGGCGGTTTACACACTATGGTTCTTCCAGATGATTTGGGCTTCTTCTCTGCTTGGAGCCATTATGATGCTAATAGGAGTGGCGGGCACAGAGGACAGGATAGCTGCAGATTCAGTGATGCCTGCCATCCAACAGGGGATCTCAGTCATTCTTTGCCCACCCCATCCCTCTCATCCATCATTGGAAAACATTTTATTAAGAGCATTAGAGCAGTTCAGAGGTCTAACTCCAATACTGAAAAGCACAGAAATAAAAGAGCTGATATTTTCAATACATCTTGAGGTTGTCAGCCTTAGATATCCTGCCCAGGTGGAATCAAGCCCTTGATCTGCCATTGTCCCTAACAAGCTATCAACAGCTTGGGTTGGTGGTGGCAGGGTCTGGGTGAGTGGAATAAAAATCTTTCAACCCTTCCAAATAGGCAGATGTCGCTTTTCTACCAGTCTCTGCAGTACACCTGTCTGCCCTGGGAAATACATTTTTCAGCTGCTGCTTTGAAAGGCCAAAAGATTTAGGTCTGATCCTGCGGCTGGGAATGGGGTGCCAAACCAGAGGGGGATGAGGTTGGGGGATCCGGGGGTCCAAGCCCAGCCCGGGGTGCCAGGTCTCCCCATCCCACTCCCAAGACTGGGGTCTGAGGTTTGGAGACCCACCCCCTGCAGGCGGGCAGCAGCCGATGTCCGAGTCCCCACAGTGACA TCONS_00068292 . 5' 719 TCONS_00068292 . 5' 719 EMBV3_11401 TGGTCATTCACACCAGCCAGCATAAGCAATCCCTTGGCAGCAGAAATGAACACAGAGGAG Gene GeneID:281584|ABCA4:NM_174221:111_cdna UTR3_Alt 2 NULL GeneID:281584 3 GENE ABCA4 NULL ATP-binding cassette, sub-family A (ABC1), member 4 EMBV3_12122 CAGCCAAACAGCAGGAAGTCCAGTTCAAAGAGTGAGGTGGAAGAAATTGAGCAGCACAAC Variant GeneID:281942|CALCOCO2:NM_174400:29_cdna 286^419 2 EMBV3_00827 GeneID:281942 19 GENE CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 EMBV3_16480 GATAATGCCAGTAAGCAATTTATTAAAGAGTCTGTCATCCATCACTGGAAATTTGGAACA Gene BVT0102_369065 + 0 NULL GK000001.2:74770007-74777084 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004044 TCONS_00004042 TCONS_00004043 TCONS_00004040 TCONS_00004041 TCONS_00004039 1 XLOC_000962 Coding TCONS_00004044 XLOC_000962 Coding Coding HRASLS 1:74773798-74793667 j TSS2032 942 1 TCONS_00004044_2 190 5 0.952838735655325 3.25921142627492e-12 0.000671843140223718 3.07126051703429e-08 0.00023578688796347 9.62323069945034e-05 7.02822410018713e-19 0.000286338680798591 0.000229920055031999 0.000562322781173732 0 1.51123119009181e-27 0 1.10403302351608e-15 4.30605538869731e-33 2.71744970736262e-13 0.00125541597370828 2.13155116214239e-16 2.66862001467127e-21 6.20974289608103e-08 3.17987135961804e-09 2.57933868229506e-21 0.00145179942670509 0.00360557013363492 0.000388998450618919 8.05666207338691e-08 0.000106379354421043 1.81014946676552e-05 0.000121707144359349 4.96523107024919e-09 1.58931945031119e-10 XM_005201527.1 HRASLS PREDICTED: Bos taurus HRAS-like suppressor (HRASLS), transcript 0.0 1550 100.00 0.910828025477707 NM_020386.4 HRASLS Homo sapiens HRAS-like suppressor (HRASLS), mRNA. 0.0 794 86.95 0.695329087048832 TCONS_00004044_2 sp|Q9HDD0|HRSL1_HUMAN HRSL1_HUMAN Phospholipid-metabolizing enzyme A-C1; 2e-102 297 85.21 0.884210526315789 1 coding 0 0 0 0 -0.0476466434825624 0.683762180431588 -0.0420434834266435 0.515053965394003 GGAGGGGAGTTGGCTGCCTCCTAGAGCCTCTTCTTTAAGGAAGGCCGCATCTGGAGCCAGGCGGACGCAAGTGTGCCTAAGTCTGCACAGCACAGTTCAGCACAAGGAAGAAAGGTCCTGTGTCTTACAGTATGCCTGGATATCAGACTGGACACTCTTCTGAGCCTGGAACTTGTGTCTGCTTAAAACACAGAATGGCATTTAATGATTGCTTTAGTTTGAGCTATCCTGGCAATCCTCGGCCAGGGGATTTGATTGAAGTGTTTCGTCCTTGTTATCAACATTGGGCACTGTACTTGGGTGATGGGTATGTTATCAACATAGCACCTCTAGAGGATGGCATCTCCCCATCGTTTACAAGTGCCAAGTCTCTATTCAGCAGAAAGGCCCTGGTGAAGATGCAGCTTTTGAAGGATGTTGTTGGAAAAGACACATACAGAATAAACAATAAATATGATGATACATACCCCCCTCTCCCTGTTGAAGAAGTTATCCAACGGTCAGAGTTTGTTATTGGGCAAGAGGTGGAATATGACATACTTGTCAACAACTGTGAGCATTTTGTGACTTTGCTTCGATACGGAGAAGGAGTTTCAGAGCAGGCCAGCCGAGCGATAAGTACCATTGGGTTTGTGACAGCTGCTGCTGGTGCCTTCTCCTTCCTGGGCTTGTTTCCAAAAAGACTAAGACCAAAATTCTATTAATTTACTGAAGAGATATTGGAGCTGAAGGAATTTGTGAGGAGGAAAAGTAACCTGGGATGAATACTTATTTTCAATGCATCATTATTGTTCCAAATTTCCAGTGATGGATGACAGACTCTTTAATAAATTGCTTACTGGCATTATCTCATCATTGAGCCATGGAAATTTTTCTTCCTTAGTAGTATAGATTCATGTGGTAACTTGAACAAGAAGCAGTGGCCTTTTGAATGAACCAGTG EMBV3_38468 CCTGGGAGACTACTATCAGGGCCGAAGGATCACCATCACAGGAAGAGCTGAACCAAAACT Gene GeneID:100336426|LOC100336426:XM_002695014:254_cdna Constitutive 0 NULL GeneID:100336426 18 GENE LOC100336426 NULL lipolysis stimulated lipoprotein receptor-like EMBV3_12562 GCGACACCTGGAATCATGGTGCATCCACAGGTTCCCGAGTGGTGCTTAGATGACTGGCAT Variant GeneID:327660|NDUFB9:NM_175783:11_cdna 139^331 1 EMBV3_40778 GeneID:327660 14 GENE NDUFB9 B22 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa EMBV3_15598 CTGTTGGGGGCCATAATCAACTGGCTGGGCTACTCCAACTCTCTGCTTAACCCTGTCATT Gene GeneID:407137|HTR1A:XM_002696304:9_cdna Constitutive 0 NULL GeneID:407137 20 GENE HTR1A 5HT1A 5htr1a 5-hydroxytryptamine (serotonin) receptor 1A EMBV3_01788 TTGCAAGTCTGCCCCACTACCTGGTTTTATATGGCCTGTAAGCTAAGACTGGGTTTTACA Gene BVV0102_116270 + 0 NULL GK000023.2:11055828-11109500 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136017 1 XLOC_082236 NonCoding TCONS_00136017 XLOC_082236 NonCoding NonCoding - 23:11058626-11059222 - TSS101307 596 0.464765100671141 1 0 0 0 0 0 0 0 0 0 0 0 0 3.59968462100579e-05 0 0.000402522609838273 0 8.86293347530772e-05 0 8.41976123024933e-05 0 0 0 0.00158124983155044 0 0 0 0 0 0 6.51625595161599e-05 0 XR_239284.1 CCDC13 PREDICTED: Bos taurus coiled-coil domain containing 13 (CCDC13), 3e-17 93.3 80.58 0.167785234899329 XM_005251492.1 CNTLN PREDICTED: Homo sapiens centlein, centrosomal protein (CNTLN), 2e-07 60.8 72.22 0.206375838926175 0 noncoding 0 0 0 0 -0.421746356559751 0.136962167104246 -0.0913198022996866 0.120973405995444 GAGGGGTATCTGCATGGGGGTCTTCAACTGTTTGGGCAATGCTTTATTTCATAAACCAGATGATGAAAAAGTATTTGCACTCCTCATGGCTTGCAGGATCTTAGTTCCCTGACCAGGAATCTAATCTGTGCCCCCTGAAGGAGTCTTGGAGTCTTGACCACTGGGCCACCAGAGAAGTCCCGGCATTATATTTAAAATTTTTTGGTTTGCCTTAAATGTTTCATAATAAAATTTTAAAAGTAATGAAATAAATGTGTTCTTACCCCGAAGGTGGCAGCAGATGGAATTATTACTGCCCTTGGCTGGACTTTGAAGAATGAGCCTCAGTTTGTTCACTTGTAAAGTGAGACACAGAACATACAGGTAACAAAGAAATCCAGAGGGGTTAATGTTTTTTCCCCATTAGACCAGGCGTGGTGAGCCACAGCTTGCAAGTCTGCCCCACTACCTGGTTTTATATGGCCTGTAAGCTAAGACTGGGTTTTACATTTCTGAAAGGCTAAAAAAGACTGAATGAGGAATAATATTTCATAACAGGTAAAGATTATGTGAAATTCAATTGTTAGCATTAATGAATAAAGCTCATCCATTTACAA TCONS_00134066 TCONS_00134067 TCONS_00134068 TCONS_00134069 TCONS_00134070 . 5' 2800 TCONS_00134066 TCONS_00134067 TCONS_00134068 TCONS_00134069 TCONS_00134070 . 5' 2800 EMBV3_04581 GCCTGGCTTCTAGGACCAAAATCAAGACATCAAACTCAGGGTTCCACCGTCCAGCTGTTT Gene BVT0102_052539 + 0 NULL GK000007.2:5367541-5380893 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39934 TTTCTGCCTGGAGAGAGGGCTCTGGGGATGGAGATGAGAAACAACACGCCTTCCTTCAGA Gene GeneID:534567|SNX11:NM_001076904:141_cdna Constitutive 2 NULL GeneID:534567 19 GENE SNX11 MGC143176 sorting nexin 11 EMBV3_26391 GTGGCACCTTGTTATTTACTAAGACAAACTCCGGTTGTTCTCTGGCCACTTGTTTCCTCG Gene GeneID:511558|SLC37A1:XM_002685133:95_cdna Constitutive 0 NULL GeneID:511558 1 GENE SLC37A1 NULL solute carrier family 37 (glycerol-3-phosphate transporter), member 1 EMBV3_23663 CCAGGCCTCTGCTTATCCTCGCCCCTCGCCTCAACTTCCCGACACTGGAGAAATACTTTT Gene GeneID:529030|RTN4RL2:XM_002693714:416_cdna Constitutive 0 NULL GeneID:529030 15 GENE RTN4RL2 NULL reticulon 4 receptor-like 2 EMBV3_40432 GTGGAGCTTTCGGCCGAGAACGAGAAGCTGCAGCTGCCGCGTGGACCCTAAGTTACTGTG Variant GeneID:281678|CEBPD:NM_174267:5_cdna 687^873 1 EMBV3_11503 GeneID:281678 14 GENE CEBPD NULL CCAAT/enhancer binding protein (C/EBP), delta EMBV3_40119 TTCTGCCATGCCAACAACATCGTGCATCGGGTGGTACCGAGCCCCCGAGCTCCTGTATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09727 TTGCCCCAAAGCCCCCAAGTTAGAGGAAAGGAACTGAAAGAAAACGGGGAGTTGCTGCCT Variant GeneID:511528|GLRX3:NM_001035101:30_cdna 715^958 2 EMBV3_19161 GeneID:511528 26 GENE GLRX3 TXNL2 glutaredoxin 3 EMBV3_23185 GAATGCAGCTGCTGCTCCTTTCTAGTTAGCTGTTTGTGTAATTCATATTAATTTTCCTGC Gene BVT0102_086688 + 0 NULL GK000011.2:43408836-43490338 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024807 TCONS_00024802 TCONS_00024804 TCONS_00024805 TCONS_00024803 TCONS_00024809 TCONS_00024811 TCONS_00024801 1 XLOC_014582 Coding TCONS_00024807 XLOC_014582 Coding Coding PAPOLG 11:43378816-43412636 j TSS18123 6457 1 TCONS_00024807_4 794 0.00851788756388416 22 0.809722345427127 0.00248410667502499 0.0021150228859481 0.00217136444859216 0.00155947729506899 0.00193372668301237 0.000666867670983866 0.000376939998267552 0.00174267868459035 0 8.00489445673649e-05 2.65355137432211e-05 3.66525413379424e-05 2.72389914736838e-06 0.000602935040340995 0.000848339724141776 0.000376860077905377 5.96233521499694e-05 7.89923012188989e-21 0.00208460791281036 0.0033859494838208 5.30864048448354e-08 0.00025375840357218 5.24367698849726e-43 0.000225319566478312 0.00273381202003284 0.00187531608177797 0.000952524911952973 2.82851991322304e-88 1.85908520559231e-19 0.000242374560354222 XM_005212637.1 PAPOLG PREDICTED: Bos taurus poly(A) polymerase gamma (PAPOLG), transcript 0.0 1.150e+04 99.17 0.996747715657426 NM_022894.3 PAPOLG Homo sapiens poly(A) polymerase gamma (PAPOLG), mRNA. 0.0 3339 89.63 0.369676320272572 TCONS_00024807_4 sp|Q6PCL9|PAPOG_MOUSE PAPOG_MOUSE Poly(A) polymerase gamma; 0.0 1371 91.50 0.90176322418136 3 coding 1 1 0 0 1.23232803279497 0.034357856493724 -0.311741532832222 0.0031372937049119 AGAGGCAGGCTGGGAAGCGGCGCCATATTGGCGTCGGCCGCGCTGTATTGTCATAAATAGAGCCGGTTTTGTGGTGTTCTCACTACTCGGTTGGATGCCTCGGCTGTAGTAAGTGAGAGAGTGAGCGTTCAAGCGAGTTACAAGCAAGCGGAGGAAACTGGACAGGAGGAGAAGGGAAGAACAAGAACAGGACTCCAGAGCGAAAGACAACTCGCCGGTGAGGGAGACGCAGGAAGCGATGAAAGAGATGTCTGCAAACACCATGCTGGACAGCCAGCGTCAACAAAAGCATTATGGAATCACCTCTCCAATTAGCTTGGCATGTCCTAAAGAAATTGATCATATTTACACACAGAAATTAATTGATGCCATGAAACCATTTGGAGTGTTTGAAGATGAGGAAGAATTGAACCATAGGCTGGTTGTTCTTGGTAAACTCAACAATCTAGTAAAAGAATGGATTTCTGAGAATCTTCCACCTTCTGTTGTGGCTACTGTTGGTGGAAAGATTTTTACTTTTGGCTCCTATAGACTTGGAGTACACACCAAAGGAGCTGACATTGATGCACTTTGTGTAGCCCCAAGACATGTGGAGAGATCTGATTTTTTTCAGTCTTTTTTTGAAAAGTTGAAACATCAAGATGGCATTAGAAACTTAAGAGCTGTAGAAGATGCCTTTGTGCCTGTTATAAAATTTGAATTTGATGGAATTGAAATTGATTTAGTCTTTGCAAGATTGGCAATACAGACCATATCAGAAAATTTAGATCTAAGAGATGACTCTCGACTAAGAAGCCTTGATATAAGGTGTATTCGCAGCCTAAATGGATGTAGAGTTACTGATGAAATTTTGCATTTAGTGCCAAATAAAGAAACTTTCAGACTCACCCTAAGAGCAGTTAAACTATGGGCAAAACGACGTGGTATTTATTCCAACATGCTGGGATTCCTTGGTGGTGTCTCTTGGGCAATGCTGGTTGCAAGAACTTGCCAATTATATCCAAATGCAGCAGCTTCTACTTTAGTTCATAAGTTCTTCTTAGTTTTTTCCAAATGGGAATGGCCAAATCCTGTGCTGCTGAAGCAACCAGAAGAAAGCAATTTGAATTTGCCAGTTTGGGATCCTCGGGTAAATCCATCAGATAGGTATCATCTCATGCCCATAATCACCCCTGCCTACCCACAACAGAATTCTACGTATAATGTGTCCACATCAACTCGAACAGTAATGGTAGAAGAATTTAAACAAGGTCTTGCAGTCACAGATGAAATTCTTCAGGGGAAGTCAGATTGGTCCAAACTACTTGAGCCACCAAATTTTTTCCAAAAGTATAGGGTTGGGTTAGTAGAATCTAAAATACGTGTACTTGTGGGAAATTTGGAACGGAATGAATTTATTACTCTTGCCCATGTAAATCCCCAGTCATTCCCAGGAAATAAGGAACATCATAAAGACAACAATTATGTATCAATGTGGTTCCTTGGAATAATTTTTCGGAGAGTAGAAAATGCAGAAAGTGTTAATATAGACTTGACATACGATATACAGTCATTTACTGATACAGTGTACAGACAGGCAAACAATATTAACATGCTAAAGGAGGGAATGAAAATTGAAGCAACTCATGTTAAAAAAAAACAACTTCATCACTACCTTCCTGCAGAAATTCTTCAGAAGAAGAAGAAGCAAAGTCTATCTGATGTCACCCGAAGTTCAAGTGGACCTCAATCCAAAAGATCATCTCTGGATAGCAATTGTTTGGACAGCTCCAGAGACACTGATAATGAAACACCTTTTAATTCCCCAGTGTCTGCAAACAAGCCTTCCAAGCCTGATATTCCTCCTTCAGGGGAGACAGAGAGGAATAATGCTGAGCCTGCTGCTGTAATCGTGGAAAAGCCACTGAGTGTCCCGCCAGCTCAAGGGCTATCTATTCCTGTCATTGGTGCAAAAGTCGACTCTGCATTAAAAGCTGTATCACCCCCAGCTGTGTGTACCATTCCTACGGTAGTAGGACGAAATGTCATTCCTAGGGTCACACCTCACAACCCTGTCCAGGGGCAGCCACATCTAAATGGGATGTCAAATGTAACCAAGAATGTTACGCCTAAAAGACCCCACTCCCCATCCGTAGATGGGTCCTCTAAGAGGTTGAAAGACATAGAAAAGTTTATTCGACTTGAATCAACGTTTAAGGAATCACGTGCTGCTGAAGACAGAAAAAGAAAATCAGTGGATGCCATTGGAGGAGAATGTATGCCTATTCCAACTATTGATACATCACGCAAAAAGAGACTGCCCAGCAAAGAACTACCAGATTCATCATCTCCAGTTCCAGCAAATAACATCCGTGTCATCAAAAATTCCATTCGGCTGACCCTAAATCGATGCTGTAGCATTCTCTCATTGATTGCTACATACACTTCTCTGAGGATCACCTGCTATCAAATTGTCATCTGCAGTCTTATGGCTTTGCGTTGGAGGTTTTACTGCCTTAACTTTCGATGCTTGTTTCTCTGTTATGGGAACCAGTTCTTGGCTCTTTGGACACTCATAAAACAAGTCCTGAAATATCCACCGCCCCCGCCTTTTTTTAAGTCTTATGTTGTAATCATTGTATAGAACTGAAAAAAATTGAAGAAAAAAAAAAAAAAAGTCCTGTAATTTTCCAAATGTTAACACATTTACTTTAGCATTGAAGCCACTTTGTGAAACCTGAGATAAATGAATGTGAGGTATCTTTTCTGCTTTCCTCATTTGTGTAGATGTACTTTTTGTCTGTTCTGTTGATTTAAATTATTTTTTCTCAGATTGGCACATGAAATATTTAAATTTTATTTTTTTGTGCCTTTCTGTCCAAATGTTGCATAGTTACCAGGGAGGATTAGTCCAGTGATTACATAAGAGTTGGGCACCACAAATTCTCTATATTTTGCCTCCTGTGGAGGCCTTTGAAATGCATCTTTATTAAGAATCAAAATATAACCAGAATACTGAAAGTCAGTATATGAACGGTAAAATTATTACATAACCTATCTCATGCCATTCTTGTTAGTTGACTGGTATTTTTTACTGAGGAGCAACTCAATCTGGCATCAACAATAAAGATACTTTAAGTATGGCAAACTTGTATTTTTGACATGTACAATTTAACTTGGCATGATAATTCCTGACCATTACGTATCCCCACAACTTCAGTTTCTTCACGGACTAGGCATGCAGAAATAAGCAGTGGATTTTATTGAGACCTAAAGGCATTTTTGATGACATTGTTACCAACCATTAATTGGCTCAGGACCTTTGTAATTTTTATTTAAATATGAGTTGTCTTTTTTTACACTGCTTTTTTCAGTCCTTTTCTTAATATTTTTTAAGTTTCATGAATGCATGCTCCATTTATTGAAATCCATAACCATGTAATTCTTGTAATATGTTGATTCAGTGTTTTGTAAATGAAGTCGTATGTATTTTCAGAGTATTTTTGTATGTACTGTAAGATACCATCTTTTCAAAGAGAAAACTTTAAAACCTTTACTGTCTCTCTTTAGTCTAATTTTTTAAATATGGATTATGCTTGAATTAAAATGAAAATGTATAGATTACACAGCCAGGAATGCTGGTATATATTACCTTCCTCAGCTTGCACTCACCATTTAGCGGGTCTAGTAGGGAAAACAAAATGGTACGTTTGAATAGTGCAGGGAGAAGCCCTTGGTTGTATAGTTTATAGGACACACGGGATGCCATTTAGCCATTGGAGTCATAGTTCATTTCTTCTTGCAAGCCCTTTACCATTGAGCTGAAATGACTTGAATTCTGATTGTCAGAGAGCAGTATCCTTCTTCTCCCCTCCTGTTCCTGACCCCTACCTACATCTCTGAAATGGAAATTCTAGTGTTTACTTCTAAGTTTTCCTTTGTGAAAGTTAAAGAATAGCAAGGAGAAAACAATGGTTGTTCCCTTATTTATTTTGTACATAGGAAAAGACGAGAATGAAATCCCATGACCAAATGGTAGCTTCCTTGGCAAAGCTGTTTTTTTAGCTGACCCTTGTCCTTTATTCAGGTATTTTGAGCTTTGTTTTATAAATATTCTGTTTGAGCAAAAGTACATGATTATGAAAGGACTGAATAACTGTCATGTGACTCAAAACATTAAAAACTTCTTTAAGGGCTTTAAGAATTCTTCATACATAGATCCAAGTTTCACCTACTATGTAAACCAATTCTTTGGAGTAACGAGCGGAGTTTCTCTTTAATAAGAAAGCAACAGGCCTAACCTTTGTACTATAGTATGGTCGTATCTCTTGTTTTAAGTGTCCATTTGACATGGGGTTAAAGACATAGCCAAATAACTCCTCAGAGACAGTGTTCTTCAACCTGTTTGCTGACTGGTTTGGGGAATTGATGAGATGCTTTTGAGATGGTGGGTTTGGTCAGAAATGAAGTGTTTTCTATCCCAAACAGTAGGTAGATCAGTACAGTTGATCCTTGAACAACACAGATTTGAATTACACAGGTCCTATATGTATATACTACAGAGGTCCTATATGTTACCTATACGTATTTTTTCAATAAATAGTACTTGTATTTTTATCTTACAGATCTTTAAGTAGGGGAGATCACAATATGTAGAATCAAAAGAACTAGGGTTTGAGTCGTGATTCTATCCAAACTGTTTCAGCTTCCTGCCCTTGGGTGAGTCATGTATCAATTCCTATGTTTTTGAGACAGAGTTAGCAGTACAAGTGTTTTCAACTGGGGTGAGGGGTTCAGCACCCCTACATTGTGCAAGGGTCAGCTGCACATTTTGTCGTCATGGTAGGAGATGGGGTTCCAAGTGAGTTAAGAGGGGGGCGTGATCTGTGACTGTGTGCTATGTTCAGAGGCGCTAGGCGAGTGTGTTTGATTCTGAGGTGTGTTTTATTTCAAGAATAACTAGAAATATATTTTACAAAGTCGAATAACCTGTTCTGTATGTAGACAACACATTCATTTTCATGACGGTATTAAATTTTAATCTTACTTTTCAGTGACTGGCTCTAAAGAATTATATATATCAAAGAAACGATTATCTGCTAGTTTAAACCTTAGGGATTTAACTAATTTGAGAGACAGGATACATGGCTTAAAACCTTGTAAAATTAGGGGAAAAGGATTTTACAAGACTGTGTTTACAATAAGTTTTTGTCTTAAGACAGCAATTTGGTAACATTAAAATGCTTACTGTCCTATATAGGCACAGAGAAGTGAAGACAAACAGTGTCAAAATGGGCTAAACTTATTTTCCACGGTGTCCACCACTTGAAAATAGGAACTCCCAACTTGCAAGATCATGGACTGTAGGGAATCCCTTGTAAATATATATAAGAAGTTTCTGTTCATATGCATATGTCTGAGGGGAAGTTCATACTTTCATCAGTTCTCAAAATGGTTCATGACACTAAGAAAAAAAAAGTTAGGGACCACAGCTTTACAGGATTGAATAATCCCAAACTTTGGAATTTTCTTAAGATTTTTCTGTGGTATATTTCTGAAAATGTACTGTGGCTCTTAACTAGTAAAGTGGGCTAATGAAAGACTCTGGAATACTAAATTTCTCTTTTCAAGTTTTCTTTATATATCTCAGATGAAACTTTATCAGTATTTAGAAAAAGCTTTATGATTGGATTTATAAATGTCTTCATGTTAACTTCAATTCATTTAACAGGGTCAAACCAACAAATTTCAACGTAGGAATGATCAGAGTAGAATAGCTTAGAATAATCATTAGAAATGGTAAAAAGCAGAATTAATCATTAAAGATCCTTAAAAAATAATAATTAAAGATTCTAATCCTTTGATTTGGTAGCCTTAAATTTCTTATTCCTCCATGTTTGTGGTTCAGACTGAACAGACCAATAAATAGAACTTTAGTGTAAAAAAAATTTTTTAATAAATAAAATTATGTGAGTGCATAAATAACTACCTATTAAACCTTCCAAAGCTTGGAATTTAAGTCATGATAATAGTGATGAATATAGTGCAAGCAATAGAAAAAAGCCAGTCTCAAAAATGGTAACTATTTCCTTAGGATTTTTTAAAAGAATTGTACAAGGTCAGAGCCTTCCCAGATTTCCTATTTTTTTCTGGAGTTTTATATTTGAAGTTAGCTGAACATAAGATTATCATCAGGCTTGCTCTAATTTTTTAATGTATTGCTGCATTTTTAGCAAGGACCCAAGTAATTACCTTAAAAAGTACTTAGGATATATTTGAGGTAAATGGTGCTACATCACTTCACAGTATTAATGTAAAATGAATGCAGCTGCTGCTCCTTTCTAGTTAGCTGTTTGTGTAATTCATATTAATTTTCCTGCTTTTTATTTGGATTGTCTTAATTTCTTAGTTGTACACACAAGCCTCATTATCTGTCTGGAATAAGTAATATAATAAACTTGCTTTGATAAATAGGTAT EMBV3_40929 GAGTTCAATGGCAGCGACTGGGAAAAGGCCATGAAGGAGCATAAGACCATCAAGAACATG Gene GeneID:521064|CENPV:XM_002695861:335_cdna Constitutive 0 NULL GeneID:521064 19 GENE CENPV NULL centromere protein V EMBV3_35531 CTTCACGTTGGTGTGTGCGGTTGTGCAATCCTCCAGCCCTATAAAGGCGGTGACCCTGCT Gene GeneID:782487|LOC782487:XM_002698634:11_cdna Constitutive 0 NULL GeneID:782487 27 GENE LOC782487 NULL similar to beta-defensin 2 EMBV3_10386 ATAACAGACATAGGGAATAACAGGCTGCGCCGATCTTTGCTGACCATGTGCCCTACTCTG Gene BVT0102_049158 + 0 NULL GK000022.2:47607217-47616710 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128760 TCONS_00128763 TCONS_00128770 TCONS_00128767 TCONS_00128768 TCONS_00126974 TCONS_00128759 TCONS_00128761 TCONS_00128762 TCONS_00128769 TCONS_00128773 TCONS_00128765 TCONS_00128764 TCONS_00128766 TCONS_00128771 2 XLOC_077939 XLOC_077537 Coding TCONS_00128768 XLOC_077939 Coding Coding IL17RB 22:47607330-47625149 j TSS95943 4391 1 TCONS_00128768_2 498 0.101343657481212 11 0.75418116511393 0.000804155951578969 0.0017690712771226 0.000867244016575377 0.000768244366506117 0.00010983633464171 0.000145440433075995 0.000234389771591255 0.000652992114703477 0.000173047646115642 6.33835909203558e-05 8.49152624443225e-09 2.1961817053523e-06 0.000127022002557633 1.76587511978864e-05 6.02778900791358e-05 2.62162332157377e-05 0 0 0.000623353255703185 0.000603874673528195 0.000225111955044319 3.45291859342537e-97 1.52223351323024e-05 9.4772932457976e-70 0.000532058688823731 0.00019507948436644 0.000910794809367394 4.02358893759945e-30 2.19253164766651e-05 7.77061115292058e-20 NM_001083467.1 IL17RB Bos taurus interleukin 17 receptor B (IL17RB), mRNA. 0.0 801 99.34 0.102937827374174 NM_018725.3 IL17RB Homo sapiens interleukin 17 receptor B (IL17RB), mRNA. 0.0 1581 82.30 0.358005010248235 TCONS_00128768_2 sp|Q9NRM6|I17RB_HUMAN I17RB_HUMAN Interleukin-17 receptor B; 0.0 791 78.00 0.975903614457831 1 coding 1 0 0 0 -1.18970813402322 0.0196950271387756 0.00694757318588715 0.897785386300235 CGGGCGGTGGCCCCGCGATGTCGCTAGTACTGCTGAGCCTGGCCGCGCTGTGCTGTGGGGCCGTGCCTCCGGAGCCGACAATTCAGTGTGGCTCTGAACCCGGACCGTCTCCAGAATGGATGGTCCGACACACCCTGACCCCAGGAGACCTGAGGGACCTCCGAGTGGAAACTATTAAAAGCAATGTTGACCTGGAGGACTCTCCAATTTTGATGAACATAAGCTGGATCCTCCGGGCAGATGCCAGCATCCGCTTGTTGAAGGCCACCAAGATCTGCGTGATGGGCAAAAGCCACTTCCAGTCCTACAGCTGCATCAGGTGCAATTACACTCAGGCCTTCCAGACTCAGACCAGACCCTCTGGTGGCAAATGGACGTTTTCCTACGTTGGTTTTCCTGTTGAGCTGAACACAGTCTATTTCATTGGGGCCCATAACATCCCCAATGCAAATATGAATGAGGACGGTCCCTCCATGGCTGTGAACTTCACCTCCCCAGGGTGCCTGGACCACGTAATGAAATATAAAAAAAAGTGCATCGAGGCAGGAAGTCTGTGGAAGCCAAACATCACCGCTTGCAAGAGGAGCGCGAACACGGTGGAAGTGAATTTTACCACCAGTCCCCTTGGAGACAGATACATGGCGCTCATCCAAAGTACCGCTGTGATTGGGACTTCCTACGTGTCAGAGAAGGAACTAACTCGAACTTCCGTGGTGGTTCACGTGACTGGGGAGAGTGAAGGTGCTGTGGTCCAGCTGACTCCGTATTTCCATACCTGTGGCAACGACTGCATCCGACAAAGAGGAACCGTGGTGCAGTGCCCACAAACGGGAGTCTCTTCTCCTCAGGATCATGACAGAAGTGTGCTGGGTGGCTGGCTGCCTCTCCTCCTGTCCGCTCTGCTTGTGGCTACATGGGTGCTGGTGGCTGGCATCTATCTGATCTGGAGGCACGAAAGGATCAAGAAGACTTCCTTCTCAACTACCACGCTACTGCCCTCCATTAAGGTTCTTGTGGTTTACCCTTCTGAAATATGCTTCCATCACACAGTTTGTTACTTCACTGAGTTTCTTCAAAACCGCTGCAGAAGTGAAGTTATCCTTGAGAAGTGGCAGAAAAAGAAAATAGCCGAGATGGGTCCCGTGCAGTGGCTTACCACTCAGAAGGAAGCAGCGGATAAGGTCATTTTCCTTCTTTCCAATGGTAACACCACGTGCGATGGTAACTGTGATGAGAAGGAGGGCGGCCCCTGTGAGAGCTCCCGAGACCTGTTCCACCTCGCTTTTAACCTCTTCTGCAGTGATCTGAGAAGCCAGGCTCATCTGCACAAATACGTGGTGGTCTACTTCAGAGAGGGTGACATCGCAGACAGCTACAGGGCACTCAGCGTCTGCCCCACGTACCGCCTCACGAAGGACGCTACAGGTTTCTGTGCAGAGCTCCTCCGTGCCAAGCAGCATGTGTCGGTGGGGAGAAGGTCACGCACCTGTCACTACAGCTGCTGCTCCCTGTAGCCCAGCCACGAAGCAGGAGACCCTAAAGCCTTCTAACCCCTCCAATCACAGGGAAAAAAGGGTCTGTAAGCATCTCAAGTTTACCATATAGGCTACTTGCAGGGAGGATTACAGCTGAACCCTGAACAACCCAAGGGTGCTGACCCCTCTGCAGCGGAAAATCCAGGGAGAACTTCACAGTCCATCATCTCTATCCATGGCTCAACCATCTGCAGATGTGTAGTGCATTACTTACTGAAAAAAATGCACTTAAGTGTATCTGCCCAGTTCAGACTTGTACTGTTCAAGAGTCAACCATATGTATATCTGCTTGAGCAAAAGGAATAGGGAGGATTTACAACAGGATAATTTATAAAGGAATATATACACCTTAATCTAGTAATTAAATGTTATACCAATAAAATTGTTATAAATATTACCAAAGACTGTGACATTAAAAACGGAAACTAAATTTATAACTCTAAACCTCAATTTCATATCTACAAATCAGGAACACTGTACAACTATAGCCACAGTGATAATCAGTAATAAAGCATTTCCCACCTGAACATCCAGTCCTGAATAGGGCATGCCCTGCAGAGTAGGTAGAACTGTTTAGCTCTGTAACTAAGTTTAATTAATGAAGGCCAAAACTGAGAGTCCTCACTAGTTCAATAACTTCTTAGGTGAAAAACCCTCTATAACACACAAAAATCTTTATAACAGACATAGGGAATAACAGGCTGCGCCGATCTTTGCTGACCATGTGCCCTACTCTGTGTGGAAACACTTCTACACCTGGTGTTTGCATAGGACCCTCCCTCTGAACCAGCTGAACTAGCCTCATGTCCTACCTGACTCTTGGGCAGGGGATTTTTAACATCAACAAAATATATCACTTACAGAGCTGACGTCTACCTTTGCCCAAAGTTACCCATTAGAAGTAACTGTCAGAATTCAGAGTTTGTTGACTATACGTAACTTTTCATGTTCAAAACAAAAATAATTCCTATGTTGAAGTTAGCCCTCTTGAAGTAATTAATTTTTTATAAATGAGTTATTATACTGTTTTACTTAAGTAAAAAAACAGAATCTACCTTGGCATTACAGAACATAGAGATGGGTGGCATTTTAAGTCTTCCAATTTTTTTGACTTTTCTCAAAGCGTCTTTTCCTTAATGCAGAAGTCACCAAAAGTTGGTTATATTACCATTTGTATTTTTCTAGGAAAGCCTGTCTCTCTCACACAGTGCAAGCCTGCATCTGCTCTAGAATGTGGATCAGTTTCAGGTGGACGACTGTTAAAATGTTTTTGTCGAGTATCCCTAAAGGGCCATGCCACTCCTCTGATACATGCCTGGCTGCTGCTGCTGCTAACTCACTTCAGTCGTGTCCGACCCTGTGCGACCCCATAGACGGCAGCCCACCAGCCTCCCCCGTCCCTTGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAACACATGAAAGTCAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCGAGAGTACTGAGTGGGGTGCCATTGCCTTCTCCGGATACATATCTTACAAAGACCAAAAAAAAGAAGCAGAGTGTACAGCTTCACAAGCAAATAATTAGTAATGCCTGAGGCAAAACAGTTACTGTGGTAAAGCTCACTTACTTGTCGTGTTCAGTTTGCATGGTGCTTTTAAGTGCTGATAGTAAAAAATGGCCATGACCTATGTCAAAACATGGACCAGAAACAAACTTCCTCTGAATCAACCTCTACCAGTTTTGAGAGCAAATTGCTATTATGTGAAGAGCTATTATACACAGAATTCATTATGCTTTTAGAACTAGGTAGCTAGTATTAAATTGTGTTGAAACAATCCAGAAATGTAAAATCATAGTGTATAAACTTAATTAAAAATTAAAAAAAAATAAAAATTAAAATAGCATACAGTTTTCAGATTGAGGGCAAGCATCCCAAAGAAGAGAAGCAAGTTAAAATTTTGTCACATTGGCAGGCTCTTCTTTGTTTCCAACCTGCTGAGCACACACTCAAGATAATCCTATTTATTTAAAATACTCTCATATTTCTCCATGTCCTAAACTTCTAGCCATCCTTTTTTTTTTTTTTGGCCCAAATGTTTACGGGGTCTTACTGCCCTGACCAAGGATTGAACCTATGATCATAGCAGTGAATTCGCTGACTCCTAACCAGTGGACCGCCAGGGAAAGCTCCCAACCATCCTTGTTTCTGTATTCCACTGGCCTGAGTCTCTTACCTTCACCTACTTTTTCTTTCTGCCAGTCCCACCCCCAGCCCCAGTTCTAGAGATCATACTGAACAAGAAGTACTCTGAGAACTTTCACTTGTTTTTCAGGTCAAGGAAGACTGAGGAGCTACTGATTAAGTTAGTAATTATGACAGGTATCTTGTCTAAATTATATATAAACCATTTCTATTTGGCTTTAGGAAGAAAATGAGTTTGCCTTTTCTGTTTCTGTTCTGGTCAAATAGTGACTGGTTTCCTTTCCCAAGCCCACCCCAGATCATGTGGGTAACAAAAGCCAACCAGCCCAACCTTAAATCTTTGCTCTGGAAATCTGGACCTGAATGGGCCCCGCTACTTTTTGTAATCCAAGAGAAAATTTTAAAAATGGAAAGAAACAACAACAAAAATACCTTTTTTCCCCACGGAATTTTAGCAGCATACAGAAGTCATGACATACGTTTATGCTGTACAAGAGGGAAAATGTGTAATCAGACATTTCTCACAATTCAGGTACTCACACACCCACCCTTCATGGGTACCCGAGACTGCCTAACACT EMBV3_11364 TATAAGCCCACCGACGAGCACAAGACCGACCTGGCCCGACGCCCGCGGCATCTGGCATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01348 GGATAAACCTCTGCCAGTGAAAGGAAATGTGAGCTGATCCCTTCTCATCCTGGACTCAGG Gene GeneID:786156|LOC786156:XM_002695632:47_cdna Constitutive 0 NULL GeneID:786156 19 GENE LOC786156 NULL similar to small inducible cytokine A1 EMBV3_22710 GTCATAGGGTCCTACGTCCTTGGTTTTCTAGTGGCCTCTGTTCACACTTGGAATGCGTTC Gene GeneID:515862|LOC515862:XM_002693798:115_cdna Constitutive 0 NULL GeneID:515862 15 GENE LOC515862 NULL similar to Olfactory receptor 5B12 (Olfactory receptor OR11-241) EMBV3_33253 GAAGCCAGGGAATCGCTTAGACTCTCGTACTGAAAATTGTCTCTCTAGCTGTGTGGACCG Gene GeneID:618131|TIMM8B:NM_001037629:131_cdna Constitutive 0 NULL GeneID:618131 15 GENE TIMM8B MGC128263 translocase of inner mitochondrial membrane 8 homolog B (yeast) EMBV3_39116 CGGGAGCAGCTTACTCTATGGAGCTCCAGAGGGCTACGCGACCAAGCACGTGGTGGAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25327 AAAAGTAAATTTTACTCTTTATACTTATCTTTCATTGAAAACAGCATAAGCATAGATTAA Gene GeneID:613449|DCLK1:NM_001109962:190_cdna Constitutive 2 NULL GeneID:613449 12 GENE DCLK1 MGC152477 doublecortin-like kinase 1 EMBV3_18303 TTCTCATCTTCCTTCTCTCTGGGGATCTCACAGGACCTTACTGGCACCACGATACCCCTG Gene BVT0102_044537 + 0 NULL GK000003.2:106062584-106154950 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30850 AGGAGGGTGACATGGACCCCGGCCTGAAAGCTGAAGAAGCAGGCATTGGCGACACGTCCA Variant GeneID:281296|MAPT:NM_174106:179_cdna 121^294 4 EMBV3_38770 GeneID:281296 19 GENE MAPT MGC134287 tau microtubule-associated protein tau EMBV3_12622 TGCACCCAAACCTCTGTCACAGCCAGGAGGTAGAATTTAAGTTTGCTCACTGACAGCTGC Gene BVV0102_002983 + 0 NULL GK000019.2:30003345-30031026 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093219 1 XLOC_057105 NonCoding TCONS_00093219 XLOC_057105 NonCoding NonCoding - 19:30022392-30023545 - TSS69988 1153 1 TCONS_00093219_1 54 0.0763226366001735 1 0 3.77373632414895e-05 1.90387362566682e-05 5.38417917909004e-05 2.25482609835621e-05 7.52491334351428e-05 0 0 7.18178477119549e-05 0.000247413075496625 0 4.96353753131944e-07 0 2.23085067444966e-05 0 0.000127654736027765 0 0 0 7.32037410172853e-06 5.77262587493501e-132 8.15588929221337e-138 0 0 0 2.71451796590611e-05 9.20633617127806e-69 9.21926098639819e-05 0 0 0 XM_005202322.1 ATF2 PREDICTED: Bos taurus activating transcription factor 2 (ATF2), 8e-16 89.7 88.41 0.0589765828274068 0 noncoding 0 0 0 0 -0.114362543609588 0.319977941868726 0.0505471027711967 0.340016214323158 CTTTTAGGATTTGAAATAGCTCACCTCCTCTAGTTTTGTTCGTAGTGATGCTTCCTCAGGCCCACTTGACTTTGCACTCCATTATGTCTTCTGGAAAGGCCGAAGCAATGCCGCCATTGTTGGAACCAGCCTGGAACCTGTGGTGGAGCTTGGCTGGTGAGTGTTGTGTTTGCGAGTATGTGAGAGAGGAAGGCCTTCATCATTCTCTCTGAGATTCCAGAGAGTAACTGTGTGTGGAAAGAGGAGGGTGTGAAACCAGACGTGGGGAGGGAATTCAAATGCCCGGATCTTGGTGACTGGGCCTCAAGGAAATTTTTGAAAATTTTCAAGTCATCAAATTGCATTTGAAGCGTTTCAGTGCATTTATAGGCATGTTATTACATTGCTTATACATATACCTCGGATAAGCTAAATCCATTTTGGGGTATTAAATATTGTGGGTATCAATTGAATTACTTTGCTGAATATGCTAGAAAAAAAAAATTTGAGTCTTTTTCTCAGAAGGTACCACCTTTCCCATCCATACCCTTAATGATATTTTTTATAATTTGAGAGCTCCCACTGTGTTGTGCCTCAGTTTCCCTGAGCGAGAGCCATAAGCTATAGATTTTATGAGGAGCTGAGAAAGTAGCCTGACCTCTTGTGAAGGTCAGGCTACTGTAATTTAAGAAAAGTCACGTTTGGGGTGTGTTCCCCAAGGGGGATATTTTTCTTCTTCATCAGCGAAGAGGTTTTCTTTTTCTCTCTGTGGGCTCCGGAAGCAGCCTCTTGGTGGGGCTTGGAGCCAGGAGGGAGGAATCAGGCTGGTAAATTCCACCGTTAAGTAAGGTTCTTTCCATCTGCCCACAGCTGATTCTTCTGCTTCCTACTTAGGAAAATGTGACCCACTTAAGTCCGCAGTGAAGGTGCCTGGGGACACTGGTGTGTGTAACATGCACCCAAACCTCTGTCACAGCCAGGAGGTAGAATTTAAGTTTGCTCACTGACAGCTGCTGTGTTAGCCCTGGAATGTTAATCCTTAGCGAGAGTGTGGATGAAAGGCAGCAGCTTTTAGCAGTTGTGTTAATGGTCTCATCCATCAAATGACCCACTCCTCTTCACCGTTCTCTTGTCAGTTATACCCATGTCTTTGATGAGAAGTGGATATGAAGAC TCONS_00096300 TCONS_00096301 r 3' 7373 TCONS_00096300 TCONS_00096301 r 3' 8525 EMBV3_14534 TTGTCCCTTGTGGGTGCCAAGGAGGGGGAATGAAACGAATGGAGGGAAAACTGGATAGCT Gene GeneID:782834|LOC782834:XM_002698945:44_cdna Constitutive 0 NULL GeneID:782834 28 GENE LOC782834 NULL similar to anthrax toxin receptor-like EMBV3_00701 TGCTACGCCTCACGCCCACACAGGTCAAAATCTGGTTCCAGAACCACCGCTACAAGCTGA Gene GeneID:539075|NKX2-8:XM_002696710:108_cdna Constitutive 0 NULL GeneID:539075 21 GENE NKX2-8 NULL NK2 homeobox 8 EMBV3_29000 GACAAGGACAATCATCGCATCCAGATCTTCACCTTCGAGGGCCAGTTCCTCCTCAAGTTC Gene GeneID:531886|TRIM71:XM_002707777:402_cdna Constitutive 0 NULL GeneID:531886 22 GENE TRIM71 NULL tripartite motif-containing 71 EMBV3_17520 AGTTGAGCACTCGGTCCCCAAAAGGCAGAGTGAACACTGACTCGGAAACTGCTGTTGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06428 CCCGTTTCGACCCAACAGCCTTTGTGAAAGCCAAGGAGAAGAAGCAGAGAGAGATCAAGA Gene GeneID:515425|CCDC61:XM_002695175:817_cdna Constitutive 0 NULL GeneID:515425 18 GENE CCDC61 NULL coiled-coil domain containing 61 EMBV3_28769 GTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCC Gene BVV0102_281372 - 1 EMBV3_29336 GK000008.2:11064778-11198676 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073436 TCONS_00010777 TCONS_00201334 TCONS_00054120 TCONS_00081557 TCONS_00085042 TCONS_00192189 TCONS_00066205 TCONS_00201377 TCONS_00192192 TCONS_00058089 TCONS_00151324 TCONS_00192191 TCONS_00184696 TCONS_00129429 TCONS_00016526 TCONS_00152803 TCONS_00184697 TCONS_00251614 TCONS_00220090 TCONS_00048995 TCONS_00060246 TCONS_00199917 TCONS_00252867 TCONS_00164317 TCONS_00109880 TCONS_00124051 TCONS_00048033 TCONS_00189997 TCONS_00030426 TCONS_00135598 TCONS_00022348 TCONS_00037648 TCONS_00037617 TCONS_00230914 TCONS_00203551 TCONS_00022124 TCONS_00184695 TCONS_00223475 TCONS_00251840 TCONS_00062751 TCONS_00037838 TCONS_00209837 TCONS_00192190 TCONS_00129205 TCONS_00015588 TCONS_00034471 TCONS_00143669 TCONS_00041515 TCONS_00000529 TCONS_00151323 TCONS_00060247 TCONS_00179493 46 XLOC_045201 XLOC_006328 XLOC_122981 XLOC_031929 XLOC_050436 XLOC_051775 XLOC_117131 XLOC_040919 XLOC_123023 XLOC_035886 XLOC_092086 XLOC_111408 XLOC_078142 XLOC_008827 XLOC_092568 XLOC_154555 XLOC_133407 XLOC_029126 XLOC_036632 XLOC_121569 XLOC_155808 XLOC_100199 XLOC_065784 XLOC_075603 XLOC_028165 XLOC_116032 XLOC_016679 XLOC_081821 XLOC_013018 XLOC_021478 XLOC_021447 XLOC_140404 XLOC_124202 XLOC_012795 XLOC_136775 XLOC_154781 XLOC_037478 XLOC_021667 XLOC_128348 XLOC_078064 XLOC_008519 XLOC_020687 XLOC_088090 XLOC_025321 XLOC_000141 XLOC_109265 Coding TCONS_00000529 XLOC_000141 Coding Coding - 1:45088092-45096984 - TSS270 8451 4 TCONS_00000529_10 143 0.745473908413206 2 0.0497131931166348 2.01012307707297e-05 1.49871009079085e-05 1.36625311347943e-05 4.53987540290904e-06 1.24531364209072e-05 5.00814608360259e-06 8.46442312822931e-06 1.24185267133133e-05 4.13121620626016e-05 0.001823279532659 0.000814409045036406 0.000443886703423644 0.000426802436486759 0.000631969837416122 0.000420788496196143 0.0164351832051245 0.0118459757916584 0.0133511864103435 1.34853947675417e-05 9.74488686084332e-06 4.71379726774531e-06 0.0113995265993752 0.0116294525732748 0.0115848317310599 2.19528616543606e-05 1.81962347473363e-05 1.11450810621553e-05 0.00508280936174051 0.0025318551055437 0.00742716955264329 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1225 90.86 0.102828067684298 TCONS_00000529_10 sp|Q08DI6|RNF11_BOVIN RNF11_BOVIN RING finger protein 11; 6e-28 104 42.47 0.895104895104895 0 noncoding 1 1 1 1 0.0450297516627036 0.769473730118356 0.00899590186576138 0.845664037517258 TATTTCGAGAAACTGATCCCAATTCTTTATTTTCCATGGTCTACTTTTATACACTGAGATGTTATGCAAAAGTCACATGGGGTCAGCAGTCCTGACTTTTATCAAAGTCAGGTGCTTCATACAAATGTATACAGAGGTCTTAGGGGTATTACATCATCTTCTGGCCAGGGGGCCTGCTGACAATTTATGACCCTCTCCTTATGACAGCGGTCAGTCAACCAGGACACTTATTTCTCCAGGGGTGATTATTCTTAAAAAAGACTCCACCTTCCGAAGGTACCAGATAAAGTTACATTCCTATAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAACCTAAAGTCTAACGTGATGGTCCAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTGGCTCAACAAATGAAAAACCCTTCACCAATACAATTTCTAATCAGCCCACTACTTATACTAATGGTTTTCTAACTTTTCTAAGGAATCTGTTTTTAGAAGGTTTAAAGCATCTCGTGCCTCTCACGGTTGGGAGGCTGTGAGCAATCACTTGTGGCCGGACAAGCCTGTCAGGCAGGCTAGAGAACCTTCAAAGGAGTTTGTAGGTTAAAACACTCTTGTCATGCCCAGGAGTTTTTATTAACTGGAGCTGTAAGTTAATTCCTTCTCCGAAAGAGGTGGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAGAGCACAAAGTAGTAAAGTAGGCAGGCTCTGGTTATGGGGGTAGATGCTCGAGGATTTCCAGGGGGACTCCTGAGACTTGATCCCGCCTTTGCGTATGTCGAGCCTCCTTCCTCATGACCTTTGCCATGGGTGGAGGTCCTCACACCGGCTCCCAACAAGAGTGAAATAGTTGGCTTAAAGCTCAACATTCAGAAAATGAAGATCATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAACTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCTGTCTAGTTAAGGCTATGGTTTTTCCAATGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCATTTGACTGATGCTTTTGAACTATGGTATTGGAGAAGACTCTTGAGAGTCCCTTGGACTGTGAGGAGATCCAATTGGAAGGATCTATGTTGGAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGCGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGAAGGGGACAACAGAGGATGAGATGATTGGATGGCATCACTGACTCAGTGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATAGACAGGGAAATCTGGCATGCTGGAGTGAGGTTGGACACGACTGAGCAACTGAACTGAACTGAAAATGAAAAGATCTAGCTTGATTTTTCTTCAAAGGTAATTTATGATTTATTATTTAACCTGTGTCCTATGATTGCCAAATTTTTTAATATTATTGGAAAATAAATGAGTTGAAAAATGACATTACAGGAAGATCAATTATACAACTAGATAATTTATTTCAGGATTCTGCAGTATTTTGAAGCTTGGAGAATATTCTGGTCCTTAGGTACAGCAGCTAAGTGTGATCTGAAGAGACCCACGCCGGATGGTTTTCTCAGACTTAGAGTACGACATGGGGTGCTCCAGAGCCCTGAAAACTGTATCTTTTTACAGCGCCAGCATTTCTCCTTTTGCCATCCTGGCTTGAGAGGATGCTGGTAGCTTAGGTGTTGTCTTGGGAATGAGGAGTAGGATGGTTCTGCTGCTAAGAACTAGTAACAGTCTCTAGCTGCATCAGGACAACACAACCTCACAAAGCAGTGAGGCCACTGGCCACTCACAAAACAGAGATGGCCACTCTGTCTGGCAGACTGAAGGAGCAGAATTCCAGGAAATGCCAGTTTTCCATAATTGTATCATTGCCATGTTCTGTGCCTGGGGGACATACTTTATTAAAGAGGTTGGGTCGATTAGATTTGTTCTGACTGGTATCCAGGTGGGTTACTCAGGTGGCTGCCCTGGATTACCTGCATGATGAGATTATGTGACCCAAGGGGTTCCATACCTGATGAGGTTATATCAATGATGGGGTTAAGCTGCATATAAGAGCTCACCATCTGAAAGGGGCTTAGTTTCTAGAGAGACACTCCGTGGTGACAGTGACCCCAGCAGAGAACTGGCTTTGTCATCTTCTCTATAGATTTGGATCCTGACCTGGGAACCAGGAGGTGTCCTGCAGAGCCGGCTGTCAGCAGCGGACAGGGACCTCACCCCCAGGCCTGAAAGATGGGGAACTGCATCGGCTCCAGCACCGGGGACGACCGGCCGGTCGCTCGGTTTCCGGCCCCCCTCCGAGAGCGCAGAGGCGGAGACGGCCCGGGGGCGGGGGGACCGCGGGGTCCGGAGCGGCGCGGGGCGGGGGCAGCCCCGCCGGGAGCGCCGCTGACCTTCCGTCGAAGGATCCGCCTCATTCAGAGCCCACCTCGAGACGTGTACGGAAGGGATGGATGCGAGACGAAGACCACCGAGTGCGCGGTCTGTCTGATGGACTTGGTGCCCGGGGACCTCATCCGGCCTCTGCCCTGCAAGCATGTGTATCACCTGGACTGCATCAACCAGTGGCTGACCCGGTCCTTCACCTGCCCGCTCTGCCGGGGGCCCGCGGACGCCGCGCAGCCTTTGTTTGAGGACGCTCTTGAGCCCAGACCCCTGGTGTGATTGCAAGGGACCCATCATTTTTACTGATTTCCATGTTCCGTACTGTGCCCAGATAGCCAGGGGTTAGGAATTTAAATCGTGCACAAAGGTTTATTAAAAGTTCCTGGAATGTGGCAGATGTCCGGGAACCGTTTCTAATGTTTTAGAAAGATAGGGAGAAATAGCGGGTGAACCTTGACCAAGTGCTGAGAGGTATAATGACGTCTTAGCATTGTCCTCTTGCTAGAACTGTGCACCCTGTTTCAGCAGCTCTACGTGTTGCATTGCATCTGTTGAACGTCAGGGAAAGATAGTGGTTACTCTTCCTAAATGAAATCAGATTCTTCTCCCCCATCCAACTTAAAAGTTGCTGGCATTTAGGCCACAGTTTTATGAAAAGTTACAATTTATACAACTGAACTAAAATAAAATCAAAGTATGTATGAGTGAATACCTGAAGAATGTTATTCTCAATTGAGCCTTCTAAATGGTCTTATCCGTTTGTTCTCCATCATTTTGAGACCCTTAACCCTTTCCTCTTATAAATCCAAACCAGGTGAACAAAGTGTTCCAGGGAAGAACAGTCCTGAGCAGGTTTATTATCTGTGTAATCAGGGCGTGTCCAGGCACTTTAGCTGTGTTTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTATCAGGTTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTGCATTGCCGGTTCCTTCTCCGGGGGATCTTCCTGACCCAGAAATCAAACCCGGGTCTCTCACATTGCAGGCAGACGCTTTACCATCTGAGCCACCAGGGAAGCCCAAGGGAAGATAGTTCTCCATTAAACTGGAAGTCAGCCAGCTTCACTCCAGTTCCACTTTACAAGCCTTATCAATTTACATTTTCCTACCAAAGCAAATACTTAAAGTTTGAACTTTCAAAATTTTCTACTTTTTATTTGTCTTTATCTCTTATGGTTGTGAAGAGCTAATTCATTGGAGAAGACCCTGATGCTGGGAAAGATTGAGAGCAAGAGGAGAAGGGGGTGACAGAGGATGAGATGGTTGTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTATACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGATAAGGGGCGCTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAATCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACGGGAAGCCTTCCACTGACGAAGAGGGGAGCGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCCAATGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCACTGCCCTGTGCTTAACTCTAGAGCTCGGGTCAGGGCCACCAGCTCCGCTAACTGAGCACTAGTTTCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGATAGTGGCAGGATTTAAATTTCCACAAACTTTAAGTTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAATGCCGTTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGACCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCGATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATACGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAATTTTGTAGATCCCGTGACAAACTTTGTTCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAATCCTTTCTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGTTCCACATTCATGAAAACAGATGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTCTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCTGGGGGCGGCTTAGATCCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGATTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCTTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTGCCTAAGTCCCTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGTGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATCTCTTACCCCTTGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCAGGTACGGGGGCAAAGTAAGAGGATAGGAGGGAGCTGAAGAT TCONS_00000526 s 3' 6565 TCONS_00000526 s 3' 6565 EMBV3_17091 GTTGTCAGATACAACAGACTCCAACTCCAACCCTCTCCCCTGAAATGCTGTGTGACCCAC Gene GeneID:534230|MAST3:XM_002688569:254_cdna Constitutive 0 NULL GeneID:534230 7 GENE MAST3 NULL microtubule associated serine/threonine kinase 3 EMBV3_04574 GATCCCCCCTGAAGTTTGTATGTGAGCAGGGCTCTTATTCTTAAGGTCTGCCCCAGATTG Gene GeneID:782347|DNMBP:XM_002698426:387_cdna Constitutive 0 NULL GeneID:782347 26 GENE DNMBP NULL dynamin binding protein EMBV3_28265 TATGGAAACTATGAAGAGGTGCTACTAAGCAACATCAGGCCCATTCAGTCAGAGGCATGG Gene GeneID:537918|TDRD3:NM_001046426:2_cdna Constitutive 0 NULL GeneID:537918 12 GENE TDRD3 MGC128532 tudor domain containing 3 EMBV3_34337 CTGCTTCAGACAGCTTTTTCAGATTACCTCCCCCAAACGATTTCCATAACCAGGAGCAGC Gene GeneID:532442|RTP4:NM_001075961:93_cdna Constitutive 0 NULL GeneID:532442 1 GENE RTP4 NULL receptor (chemosensory) transporter protein 4 EMBV3_09606 CCATGTCTAAGCAAAGAAAACTGCCTGCATATTGGTATGTCCTGGTGGGGAATAAAAGGG Gene GeneID:100336229|LOC100336229:XM_002696241:27_cdna UTR3_Alt 1 NULL GeneID:100336229 20 GENE LOC100336229 NULL tyrosine 3/tryptophan 5 -monooxygenase activation protein, zeta polypeptide-like EMBV3_40406 TCAACGTTCACTACCTCCGGCTCACCGACAAGTACAACTTCGTGGACATCGCTGATGCAA Gene GeneID:505736|FLJ10803:NM_001034256:25_cdna Constitutive 2 NULL GeneID:505736 4 GENE FLJ10803 MGC127762 hypothetical protein LOC505736 EMBV3_36702 CTTCCAGCCCAACACCCAAGTGAAGGTCATCGCAGCCACCAACAGAGTAGACATCCTGGA Gene GeneID:508448|PSMC3:XM_002693575:268_cdna Constitutive 1 NULL GeneID:508448 15 GENE PSMC3 NULL proteasome (prosome, macropain) 26S subunit, ATPase, 3 EMBV3_31132 ATCAGCTCCTGGACATTCTTGGGATGGGTTGGTGGTGAGGTTAGCAGGAGTCAGCATCAT Gene BVT0101_019506 - 1 EMBV3_29812 GK000025.2:26649702-26661749 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00148816 1 XLOC_090696 NonCoding TCONS_00148816 XLOC_090696 NonCoding NonCoding - 25:26655022-26655469 - TSS111351 447 2 TCONS_00148816_2 50 0.977628635346756 1 0 0 0 0 0 0 0 0 1.32320360323895e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000205235941901715 0.000112514405689668 0 0 0 0 0 0 XM_002688782.3 ZNF627 PREDICTED: Bos taurus zinc finger protein 627 (ZNF627), mRNA. 4e-40 168 78.06 0.512304250559284 0 noncoding 0 0 0 0 -0.0414134800523408 0.724642162607463 0.0507531390475679 0.422932514700688 GATCAGCTCCTGGACATTCTTGGGATGGGTTGGTGGTGAGGTTAGCAGGAGTCAGCATCATCACCCTTCAGGTGCAACTGGTCTGGGGTCTACACACTTGTGGGCCGCATACCATTGTTAATTGCTCTTTACTTCTTCCTCCTGGAGGGGGTTTCAGTATCTGCAAAATAGCTTAAAGATATTGTTTGTATCTGTCGATGGGGCAACAGGAGCCTACCCCAAGGCTGCTCTCTCTTTTTTAATGCAATTTTATGTATCTGTTTTTGGCTGTGCTGGGTCTTTGTTGCTGCACTGGCATTTCTCCAGTTGCAGCGAGCAGGGGCTACTCTCTAGCTGCGTGCGTGGGCTTCTCATTGCCTTGGCTCCTCCTGTGGGCCATGGGCTCTAGAGCACAGGCTCAGTAGTTGTGGCGCACGGGATTAGTTGCTCCGAGGCATGTGGCATCCT TCONS_00144884 TCONS_00144885 TCONS_00144887 TCONS_00144883 . 3' 4387 TCONS_00144884 TCONS_00144885 TCONS_00144887 TCONS_00144883 . 3' 4833 EMBV3_25078 ACAATAGCAGTGTATGACGCAGAGAGCTCAAACCCAGTGCTCTGTGATAACCTAGAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23729 GGTCGGTAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA Gene BVV0102_137796 + 1 EMBV3_42262 GK000027.2:5104397-5124192 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04011 CTCTTCTGAGGGGGCTCCATACCTCTCCAGAGAAGCCAGATAAAGAACTTTGTTTCACAG Gene GeneID:615813|ITPKA:NM_001083519:190_cdna Constitutive 0 NULL GeneID:615813 10 GENE ITPKA MGC142700 inositol 1,4,5-trisphosphate 3-kinase A EMBV3_06345 CTCCCGGCTCGACTGGCGGCGCGCGCGGCGTTGCCGTGCAGACCGTCTACGTGCAGCAGC Variant GeneID:520564|LITAF:NM_001046252:198_cdna 59^283 1 EMBV3_28318 GeneID:520564 25 GENE LITAF MGC137407 lipopolysaccharide-induced TNF factor EMBV3_12492 TGCAGTTCAGCATACATATCGTTTGACAGATTTTCACTGAGCAGGCCGGGAGGGGCCACC Gene GeneID:503555|FCAR:NM_001012685:142_cdna Constitutive 0 NULL GeneID:503555 18 GENE FCAR NULL Fc fragment of IgA, receptor for EMBV3_12765 TGAGATCAGCCTGACGTTCTCCAGCAACAACGTGTCCGACCTCTTCCCCGAGCTGCCCTT Gene GeneID:100125760|DPP7:NM_001105043:4_cdna Constitutive 1 NULL GeneID:100125760 Un GENE DPP7 DPPII MGC151556 dipeptidyl-peptidase 7 EMBV3_33193 CTCTGGGAAGCAAAGGTATGAGAAGATGATCAGCGGTATGTACCTGGGTGAGATTGTCCG Gene GeneID:281771|HK1:NM_174319:218_cdna Constitutive 0 NULL GeneID:281771 28 GENE HK1 NULL hexokinase 1 EMBV3_03533 CTCCCCTTTCCTGGTGATTGATTTTACGAAAGAAAGCTGCTCAGAAAGCCCTGGCAGTGG Gene GeneID:505690|LARP1:XM_002689324:45_cdna Constitutive 1 NULL GeneID:505690 7 GENE LARP1 NULL La ribonucleoprotein domain family, member 1 EMBV3_17505 GCCTTATCATGGGATCTGGTAGTCACAGCCACAGGAAGATACTATCGGTAAAAAAAGATG Gene BVV0102_007819 + 0 NULL GK000005.2:91371148-91770302 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07988 GCTTTGAATGAGGTATTATGTTGTCTCACTGATGCTCTCTCTACTTTGGAAGGGCCAAAC Gene GeneID:505937|VSIG1:NM_001045930:16_cdna UTR3_Alt 3 NULL GeneID:505937 X GENE VSIG1 MGC137313 V-set and immunoglobulin domain containing 1 EMBV3_31577 GTCTGACCCCCAAACCTGGCTCCAAATCCCTCCCAGCCACCTATATCAAAGTTTACCTAC Gene GeneID:519929|RIMS3:XM_002686455:476_cdna Constitutive 0 NULL GeneID:519929 3 GENE RIMS3 NULL regulating synaptic membrane exocytosis 3 EMBV3_11294 GTTCGGCTGTGTTTGGATGCCAGGGTTTCCATTTTCAGGGCGATACAAAGTATTATGTGG Gene GeneID:521706|LOC521706:XM_002691466:326_cdna UTR3_Alt 2 NULL GeneID:521706 11 GENE LOC521706 NULL similar to Intersectin-2 (SH3 domain-containing protein 1B) (SH3P18) (SH3P18-like WASP-associated protein) EMBV3_38855 CCATATCTTCCTGCCCAGCAAGGAGGCCTACGAGAGCCTCTACAACAGGATCAACAATGA Gene GeneID:100336760|LOC100336760:XM_002699387:366_cdna Constitutive 0 NULL GeneID:100336760 29 GENE LOC100336760 NULL hypothetical protein LOC100336760 EMBV3_27540 ATTGCAGCCTCACCCCCAGTGACAATAGCAAAAGCGACTGAACCCCTGGAAGCTGAGATT Gene GeneID:539194|GABRA6:NM_001144085:14_cdna Constitutive 0 NULL GeneID:539194 7 GENE GABRA6 NULL gamma-aminobutyric acid (GABA) A receptor, alpha 6 EMBV3_43006 AGTCTTGGATTATACTTAAAAATTATGATGGGAAAAAAATGTATCAACTGTTTATATACA Gene GeneID:613396|TMEM192:XM_002694306:11_cdna Constitutive 3 NULL GeneID:613396 17 GENE TMEM192 NULL transmembrane protein 192 EMBV3_39588 AGTCACTTTTCCAGCAGAAGGCAGAGCTGTGCGATCCAGTCAGAGGCCCTGAGCTTGCAC Gene BVV0102_276066 - 1 EMBV3_36581 GK000018.2:1694463-1748256 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087955 1 XLOC_052743 NonCoding TCONS_00087955 XLOC_052743 NonCoding NonCoding - 18:1728280-1728900 - TSS65301 620 1 TCONS_00087955_1 49 1 0 0 0 0 0 0 0 0 0 7.635606146012e-05 3.31813631331824e-05 0 0 0 0 0 0 0 0 0 0.000231981061677183 9.79270414517174e-06 0 0.000207155994858964 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0117048241919125 0.928600857490195 0.0234390145968735 0.625358951190813 CCTTTGCGGTCCTCACAGCAGCTGACATTGCCACTTGGCTGAAGTGGTAAAGCAGATTACCTGCCTAGCAACCTTGGGGCTCTTTCCCCGCAGGGGTCCTGCCTGGGTCATTCACAGCGTATTATCAGCTCCGCGGTGACAAGGACGGTGGCTTAGCCAGAGCCAGGGAGGAACGGAAGCAGGTGTGCACTGGTCTCGACAGTTTACCAGCCACCTGCTCTCTGCCCCCTGGAGCTGACTGTTAGTGAGCCCGGGGAAAATGCGGGCACAGGGCAGGACTGCGTCCGAGGGGGTTGGCGCTCGGAGCGCCTCTGTGGCACTGGGCAGGGTGCAAGCTCAGGGCCTCTGACTGGATCGCACAGCTCTGCCTTCTGCTGGAAAAGTGACTCCGGAGGATGCAGGCTGAGCGAGGGGCCCACCCCTGGGCTTCTCTGCACCTCCAGTCCCGGGGGAGAGAGACGACATCGCTCCCTTTAATCTCCTGGTCCAGGCGTGGATGCAGACACCTCCTTTGGGTTTTCATTAACATAACTGTCACAGGCTGACCTTTCCAGAAGACATTAATAAATATAAAAGGAGAATAAAAGAAAGCTAAAGATAAGGTATATGAAAAATAAAAA TCONS_00082065 TCONS_00082066 TCONS_00082067 TCONS_00082068 . 5' 19357 TCONS_00082065 TCONS_00082066 TCONS_00082067 TCONS_00082068 . 5' 19357 EMBV3_36253 GGCCTTGAGATTGTAGAAACTGTTGAGATGATAGAGAATGGCCTTGGAGATTGTTTCCAG Gene GeneID:618622|FTO:NM_001098142:462_cdna Constitutive 2 NULL GeneID:618622 18 GENE FTO MGC139141 fat mass and obesity associated EMBV3_03327 GGACGACAGGTTCATATTGTTGTTAATAATGTTAATTAGCTTGTATGAAATTTCCCCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05128 ATTCCTGGGGGAAGGGGGACTTGGATTATGCCATTTCTCTGAGCCCAAGATAGAAACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14001 CCGTAACCCTAAAGTTGTTGTCTTTTGGTCTATGAAGTGGGTAACTGTTGCTCTTTGCCC Gene GeneID:493728|CAPZA2:NM_001012998:30_cdna Constitutive 1 NULL GeneID:493728 4 GENE CAPZA2 NULL capping protein (actin filament) muscle Z-line, alpha 2 EMBV3_29786 ATTCAACTGGAGACTTTCAGTACTCCTCAGAACAGTGCTACGGACCTCTATTTTGAAGGA Variant GeneID:616438|SPIC:NM_001076421:79_cdna 188^300 1 EMBV3_17443 GeneID:616438 5 GENE SPIC NULL Spi-C transcription factor (Spi-1/PU.1 related) EMBV3_40860 CCTGTGTACCCACCGCAGGCCCCGGGCCAGGTCATCAAGCCGACCTGTGCTCCCCCGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16633 CAGTGTCACCAGTCCTTCCCCAGATGCCACCAAGGAAGCCAGATCTCAAGAAGCTATGGA Gene GeneID:534377|SERGEF:NM_001076021:169_cdna Constitutive 2 NULL GeneID:534377 15 GENE SERGEF MGC128942 secretion regulating guanine nucleotide exchange factor EMBV3_35118 TAACTCTGAGAAGTCGTCCTCTTCAGAAAGGTGGCTATCATCCAGTGAAAATTGGAGACC Variant GeneID:505945|SRPK2:XM_002686763:60_cdna 192^343 3 EMBV3_41183 GeneID:505945 4 GENE SRPK2 NULL SFRS protein kinase 2 EMBV3_43475 CGCGCGTGGACATGGCGCTCGACCCCTCAGATTTCACTAAGTGTTGCAAGGACTCTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17168 AAGCTTTTCTTTGTTTCTCAACCAAAAACTCAATCTATGGACCCACACAACACCGTGCTG Gene BVV0102_256858 + 0 NULL GK000002.2:43382650-43529728 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102341 TCONS_00102342 TCONS_00102340 1 XLOC_061845 NonCoding TCONS_00102340 XLOC_061845 NonCoding NonCoding - 2:43456816-43470685 - TSS76225 1223 3 TCONS_00102340_2 47 0.528209321340965 3 0.912027689645226 0.000728666123103096 2.01340318157136e-06 2.44641434351964e-09 3.6561907188824e-19 0.000187613782257396 3.32592136318356e-29 4.9772098560051e-10 8.03965591317988e-10 2.57994865675991e-05 0 0 0 0 5.76901637462853e-05 1.00256480259965e-05 0 0 0 0.000266780445406053 1.53666005532043e-11 0.000299808427680643 0 0 0 0.000246705571955317 0.000126731476597598 0.0020552518940141 0 0 0 XR_230269.1 LOC101902197 PREDICTED: Bos taurus uncharacterized LOC101902197 (LOC101902197), 2e-93 347 100.00 0.156173344235487 0 noncoding 0 0 0 0 0.0969391407602768 0.526979931158356 0.0327468864606178 0.527577053198497 TAACCTTTTATTCCTTTGTACTTAGTCCATCTGTGCTTGCTCCCGGACCGCGTGCTGACGGCTTGTATCTGGCCCTTCACACCAGAGTTCCTACTGCCAACGGCAAGACTTCAGCCAATACTGTGGCTACGAGAGCCACGTGCAGGCGCAGCAGTTGAAGGTGGCGGTGAGGACGGGCCGTGAGCAGACTGCAGGGCGCTGTGATCCCGAGTGGTGTGCAGAAAGACTGCGTGAGCAGCACAGGTGCACCTGCACGACCTGCGAAAACCCCAGATCCCCGCCCACCAGATCCCTATAAGGCAGCCCTGATTGTGCTCCCACCAGATCCCTATAAGGCAGCCCTGATTGCGTTTTGTGCGCGAGAGCTTGGACACTAGAGCTGCAGCTGCGGCCTCTCCATTCTCTGATCAAAGCTTTTCTTTGTTTCTCAACCAAAAACTCAATCTATGGACCCACACAACACCGTGCTGAAGGAAGGACCCTGGTTGGGGATGGACTCTGGCAGTGGGGAGGAAGCTGAAAATGACAAGTATCACACAGTGGCCGAAGCTAGTTTGGATCTTCATAGAGGATATCTATAGTGTCCTATGGTTAGAGGTTCTGTCACCCCTTCCTTGGTATCCTCTAAGAATGTTAAAAACAAAACTTGAATGCAGAAGGATCTGAGGAAACAGGAAAAACCTCACTCTACTTGCATACCCATGGCCTCCAGAATTCAAGTGAAGACATCTCAACTTGGTAGAATGCAGCTCATTTTATTCCCAGGGTTCTGGTGACTGTACAGGGAGGGAGGCAGCCTGCAGCAACAGAGAGGTCATATCTCTCAAAAACACTGTTCAGAAAGCAGATTTGAATCCACTCTTGGTCTTACCAGTGTGACTGGGTTCCTCTACTCTCTTCCTTTGAATATCTTAGCTGTGGGGGAGTGATGATACTGGAAATGGAAGTTGTGGGGAGACAACTTCACATTGGCAGCTGGAATTTGGGCTTTTAGTTCATATTTGAAGGTCACTTGGACCCTCACAATGGGTCTCAATTTTCCTTTATTTTTACACAGTTTGACATTGTAGTTCTTCATTTTTTTAAATGATATCTTTATTTATTTTTTAATTAATTTATTTTAATTGAAGGCCAATTACTTTACAATATTGTAGTGGTTCTTGCCATACATTGACATGACTCAGCCATGGGTGTACATGTGTCCCCCATCCTAAACCCCCCTC TCONS_00105155 TCONS_00105156 TCONS_00105157 TCONS_00105158 r 3' 71943 TCONS_00105154 r 5' 74168 EMBV3_14614 CTCCCATTCTTAAGTATTTCCTCAAGGTGTTAGATGTTGCTCCTTATTGAAAACCAATCT Gene GeneID:526887|REPS2:XM_002700366:2_cdna Constitutive 0 NULL GeneID:526887 X GENE REPS2 NULL RALBP1 associated Eps domain containing 2 EMBV3_22652 ATTGCTAAACTGCAATCAGCCATTGCTGAAGCTGAGCAGCGTGGGGAGCTGGCCCTCAAG Gene GeneID:100299984|LOC100299984:XM_002687260:118_cdna Constitutive 0 NULL GeneID:100299984 5 GENE LOC100299984 NULL similar to keratin 6A EMBV3_20480 TCTTCAGCCAAGAGCTGGGCCTCCAGAAAAGAGGATGCTGTCTGGTGCTGGGCTACATGA Gene GeneID:100336705|LOC100336705:XM_002699223:25_cdna Constitutive 0 NULL GeneID:100336705 29 GENE LOC100336705 NULL hypothetical protein LOC100336705 EMBV3_06549 CCCACCGTTTACGTGTAGGAAAGACATTCTCAGCTCCCAGGTGCTGTAACACCAAGCGAC Gene BVT0102_064183 - 0 NULL GK000014.2:2742639-2770328 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054305 1 XLOC_032114 NonCoding TCONS_00054305 XLOC_032114 NonCoding NonCoding - 14:2745054-2746782 - TSS39982 1728 4 TCONS_00054305_4 50 0.359953703703704 1 0 0.000669262434057382 0.000616397521952493 0.0009693134228762 0.00056706649061001 0.000766196084216082 0.00044299153117325 0.000658092397961136 0.000201949318459504 0.00044062352335538 7.14322055046424e-06 3.97428835102155e-06 0 4.64931110340046e-05 0.000288555223230288 4.54277652398419e-05 0.000259836453666037 0 0 0.00101878639941949 0.0012901291443183 0.000340816933251976 0 0 5.82105539311774e-05 0.000473124954773118 0.000621778386004819 0.000424969077463107 0 0 0 XM_003581785.2 RIPPLY3 PREDICTED: Bos taurus ripply transcriptional repressor 3 (RIPPLY3), 3e-117 426 86.18 0.210069444444444 0 noncoding 0 0 0 0 -0.187298374038769 0.470959024999654 0.0361709722132027 0.517946816446019 TCCAGCAGAAAAGACACCTCTCCGCAGCATGCAACTCAGCCAGTCTGCAACAGCGGAACCAATGGGAAGCCTCCATCAACCATACCCTTAGTTCCTCCAATGGACTCTTCCGTGATCATCGCGGCCCCGCCCATCTCCTCCTTTTTCCTATAAAAGCAAGTTCTCCGTCCTTGTCCTGTGGGTTTGCTTACAGTCGGCACCAGATTGCTTGTCTGAAGTCGAAATTTCTGTTGCTGTTCCTGAGTAAACTTGCTTTTGCCAGTAAACTATCTGGCTGTTATATTATTGAAGTTGACAGTTACTAGGTCAAGACTGTTAGTCATGATGTGCAAATATTCTATAGCTTTATTAATGTCCTGCCTTGTTCTATTGATGCTTTTGAACTGTGATGTTGGAGGAGACTCTTGAGAGTCCTTTGGACAACAAGGAGAGCAAACCAGTCAACCCGAAAGGAAGTCAACCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAGCTCCAATACTTTGGCCTCCTGATGCGAAGAACTGACTCACTGGAAAAGACTCTGATGCTGGGAAAATTGACGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGAATCACGGACTCCGTGGACATGAGTTTGACAAGCTCCGGGAGATAGTGAAGGACAGGGATGCCTGGCGTGCTGCAGTCCATGGGATCACAGAGTCGGGCACGACTGAATGAATGAACTGAACTGAAATTGTTCTATCTTACACAGAGAAAAATGTACTGAAATCTACCAACTTGTCTTTTGCTTCTGTTGATGTTTGCTTTAAATTTTGTGGCTATGTTAATAGATGCTTATCCATTTAGAATCATTTCAGCCTCTCGGATTTACCCTTTGGTAATTACGAAAAGCTCTCCACTATAGTAATGCATGTTGTGTTGGAATCACCTTTGTCTGACATTAGATGCTCTACCACCCTTCCTTTGTTTACTGTTTGCAGCGTATGCCCGTGACTAGCTTCTGATCCAACATCTGCACCAGCCCAGGACGCTGCCCACCCTCCCACCCCTACCCCCAACCGCCAAGTCTGGAGATTACACTGGAGCGTCCTGGTGCAGCCAAGCGGGGCTGGGCCGCTAGGGGCGCCAGAGGGAGCGGTGGGGCTGGTGCCGGGGGAGCACACACTCCTTCCGCGGTAATTCCGGTTGTGTTTGGCCTGTTCCGGGGTCTGCCGAGTTCGGGGCCTGAGGCCTTTGCGCAGGTTTGAGCGTTTCCGTCCGCAGTTGCTTAACGAGGCCGCGGTTGTGCTGGCCCGGAAGCCTCGGGCTCCACTCTCCCCGTGGAGGGGGGTCTCGTCAGCTCCGTGAGCTGGCCCGTTCCTTGGCGCTTCTGCATGTTAGCGGTTTCCTGAGGCCGGGCCGGCCGCTTGGTGTTACAGCACCTGGGAGCTGAGAATGTCTTTCCTACACGTAAACGGTGGGGGCGCGGGGGTCGGGGAGGCGGGGCATCTTTTGTGGAAATCTATAAAATGCAGATTTCATTGACCAAAAGTAAAGGTGTCTTTGGAACGCAGCGAGGCTCGTCTGTTGTGTTTACCGCCTCTCGGAGCACTGGCCCCGTGTATTGGTTTCTCGCTGACCCCTGTGCCGCTCCTGCCATAGGCAACTCTCTACACTATTGATATCACTGGGTTAACGATGTATGTAGTTCTTTATATGTAGTGACACCCCAAGACCTCA TCONS_00052631 . 5' 2385 TCONS_00052631 . 5' 2385 EMBV3_18128 CACGAGGTGATCATTTTAAACTCCGCTTCCGAAAAAACTTTCAGGCCTTGCTGGAGGAGC Gene GeneID:514997|ZNHIT1:NM_001046185:179_cdna Constitutive 1 NULL GeneID:514997 25 GENE ZNHIT1 MGC140071 zinc finger, HIT type 1 EMBV3_28609 TGACATGAGACTGGGTGGGTTTCACTGATATTCATAGAGCATTCCTTCCAAAAGCAGCAG Gene BVT0101_000843 + 1 EMBV3_16796 GK000007.2:64223082-64233813 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02277 GTTTCCCTGGGGCCTTGGGGGAGGCTGAGATTTCACAAAAGACCTCCACTTTCCATTCTT Gene GeneID:514596|MTMR14:NM_001100364:104_cdna Constitutive 1 NULL GeneID:514596 22 GENE MTMR14 NULL myotubularin related protein 14 EMBV3_08922 GAATTTCCCCAAGAGAAGATGTGTCTGCGGCTTTTCAGGGGTCCCAGCAGGATAAAGCCA Gene GeneID:533001|THOC5:NM_001083716:68_cdna Constitutive 1 NULL GeneID:533001 17 GENE THOC5 MGC148498 THO complex 5 EMBV3_12507 CTTAATTCTCAGACTGGATGGACTGGATTCGGGGCAGACGGAACTGTGGCCCTCCAGACA Gene GeneID:508728|DDX56:NM_001034329:31_cdna Constitutive 0 NULL GeneID:508728 4 GENE DDX56 MGC128435 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 EMBV3_35388 CATCTACGACATGGACAAAGACGGCTACATTTCCAACGGGGAGCTCTTCCAGGTGCTGAA Gene GeneID:617585|PPP3R2:NM_001079631:8_cdna Constitutive 0 NULL GeneID:617585 8 GENE PPP3R2 NULL protein phosphatase 3 (formerly 2B), regulatory subunit B, beta isoform EMBV3_24155 CTGCTCAGAATGGTGCAGATGAGGGAACTGGGGCCTGGAAGAATTCTGTGGAAGAGTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16815 TTGATAAAAAGGAATAATTATCGACCCTTCCAGGAGTGTTTCAGTGACAGACAGAATGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02491 GGATAAAAGAGGTGGGGGGTTGGAGTGCCATGTCTTCACTGAGGAGTAAAAGGGAAAACC Gene GeneID:282142|ANXA11:NM_174502:236_cdna Constitutive 3 NULL GeneID:282142 28 GENE ANXA11 MGC140235 annexin A11 EMBV3_21090 CCTCCAGAGGCCAAGAAGCCCTGTGTCTTTTGTGGTTCAGCAACAACCTTTCATCTTGTT Gene BVV0102_162593 + 0 NULL GK000017.2:51708351-51815844 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075401 TCONS_00075399 1 XLOC_046575 NonCoding TCONS_00075399 XLOC_046575 NonCoding NonCoding - 17:51754398-51773762 - TSS56869 770 1 TCONS_00075399_2 79 0.514285714285714 2 0.960336724681093 0 0 0 0 0 0 0 0 0 5.36512375360069e-06 3.34468216836723e-05 5.54099843900529e-05 0 0 0 0.0323298992582555 0.0167672628692813 0.031223470069061 0 0 0 0.00844453114756285 0.0105114712128294 0.0105462015982875 0 1.01263933584733e-06 0 0.000987552445070454 0.00106120880394697 0.00227042953708203 XR_238119.1 LOC101907056 PREDICTED: Bos taurus uncharacterized LOC101907056 (LOC101907056), 0.0 753 100.00 0.54025974025974 0 noncoding 0 0 0 0 -0.403677153917072 0.0219180972371949 -0.0203806364723498 0.758490550512704 TCAATCATTTTATGGCCCGGGACCACTCACCTTGTTCGAAGATTATCTCAAAATGCATGCTGTGGGTGAGGAGCCTGGTGCTATTCTCTGAGTTTTGAGGCCTTTCCTTTCTCTAATTAGCAGACTGCTAGTGACGTATGGCTAAAGACTAGCAGGGGGGCACTCTTTCTGACTTCTTCTGATGTCCGTCAGAAGCTTTCTCTATCTCTTTACACTTTAATAAAACTTTATTACACAAAAGCTCTCAGTGATCAAGCCTCGTCACTGGCCCTGGATTGAATTCTTCTCCTCCAGAGGCCAAGAAGCCCTGTGTCTTTTGTGGTTCAGCAACAACCTTTCATCTTGTTGCTCGGGCTCGTCCGGGATCCTTCAAGACAAGATCAGAATCTGGCAACTTCTCCATCATTCCTGCAATCCTCCACCTAAGGTTTCACTCGTCATTCCCAAGTTGAGCAGACTTGAGAAGAACCATGAGAGCATCCTGTCAGCCTTCAGATCCAACTTCAGCACACAGACGACTGTCTTCAAAGAGATGCCCTCTCTTCAGCCCACTGTTCAGAACTCTTCAACTTTAATCCTTTCATATCTAATCAAGTTTACTTTATGTATGGTGGGTAGCACCTCACTTTGCAAAGCAGGTGTATTTTTTTTTCGTATTGTTTTCTTGATCCAGAAAGAATTCCCACATAGCAATGTTAAAAGAATAAAGAAAAATATAACCAACACAGGCCAGAATTTGGTTAAAATATTAAGAATACTGTTGAAGCCTC TCONS_00077241 r 5' 96656 TCONS_00077241 r 5' 96656 EMBV3_20916 GTTCAAGGACTCTAGTTAACTGTTGGCATGCTAGCTGACCCAGTGGAAATATTTGAGAGG Gene BVT0102_220288 + 0 NULL GK000025.2:36931835-36941799 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147146 TCONS_00147143 TCONS_00147145 TCONS_00147144 TCONS_00147147 1 XLOC_089308 Coding TCONS_00147145 XLOC_089308 Coding Coding ZKSCAN1 25:36935284-36954694 o TSS109867 7477 1 TCONS_00147145_2 154 2 0.614869390488948 2.61256926057286e-18 0.00313640440266282 0.00125286776857159 0.0031002443035694 0.00183194750402433 0.000532206603457589 0.00158037699150422 0.00303104099517121 0.0027670462218946 0.00145288387701303 2.54502635717035e-88 0.000194693480744211 2.27848186920708e-11 0.00200162235937884 0.000456278957068675 0.00358325831713261 0.00160605806224337 0.0048044291384433 0.00204905947336669 0.00280576753080315 0.00175233367005168 0.00118081728105551 0.000932003204863154 0.00211733154997128 0.00487156578497038 0.00407458973379617 3.84430083990607e-19 4.17004662512067e-09 1.94043519293312e-25 0.000343791272616227 XM_005225002.1 ZKSCAN1 PREDICTED: Bos taurus zinc finger with KRAB and SCAN domains 1 (ZKSCAN1), transcript variant X1, mRNA. 0.0 1.270e+04 100.00 0.941955329677678 NM_003439.1 ZKSCAN1 Homo sapiens zinc finger with KRAB and SCAN domains 1 (ZKSCAN1), 0.0 1707 74.92 0.333288752173332 TCONS_00147145_2 sp|Q8N8C0|ZN781_HUMAN ZN781_HUMAN Zinc finger protein 781; 1e-15 74.3 35.76 0.961038961038961 0 coding 1 1 1 1 0.067757753906462 0.64279231430971 0.00165526600519555 0.977915915926898 CGTTCCCCGAGCGGTGATTAAAGAGCGTCTGAAGCCTAGTCTGAGTGGATGAAGAAGTGATCTGGTCTAATAGAGATGATACGAATGAGAATGAGGAGTCCACCTCAAAGGCTGAAAGTGCAGAAGACTCGGCATCACGTGGGGAGACTGCAGGAAAATTCCAGAAAGATGTCGGAGAAAAGCGTGAACAGCAGGGCAGAGTGGTAGAAAGGCAGCAGAGAAACCCTGAGGAGAAAGCTGGAAAAGAAAAGAGAGACTCAGGGCCAGCTACAGTCAAGGAGAAAAAACCCAGCACAGGAGAGCGAGGCCCAAGGGAGAAGGGGAAGGGTCTGGGGAGAAGCTTCAGCCTGAGCTCCAACTTCACCACTACCGAGGAGGTTCCCACGGGAACCAAGGCCCACAGATGTGACGAATGTGGAAAATGCTTCACACGGAGTTCAAGCCTTATTCGCCATAAAATAATCCACACTGGAGAGAAGCCCTATGAATGTAGTGAGTGTGGGAAAGCCTTCAGTCTTAACTCAAACCTCGTCCTGCATCAGCGCATCCACACAGGAGAGAAGCCTCATGAATGTAACGAGTGTGGCAAAGCCTTCAGTCACAGTTCAAATCTCATTCTGCATCAGCGAATCCACTCTGGGGAGAAACCCTATGAATGTAACGAGTGTGGGAAGGCCTTCAGCCAGAGCTCAGACCTCACTAAGCATCAGAGAATCCACACGGGAGAAAAACCCTACGAATGTAGTGAGTGCGGAAAAGCTTTCAACCGAAATTCATACCTTATTTTGCACCGGAGAATTCACACCCGAGAAAAGCCCTATAAGTGCACGAAGTGTGGCAAGGCCTTCACCCGGAGCTCAACCCTTACCCTGCATCACAGAATCCACACCAGAGAGCGAGCCTCAGAGTACAGCCCGGCCTCCCTCGACACGTTTGGAGCATTCCTGAAAACCTGTGTGTAAAGTGTTTGTCAAGCCATTTCCCCCTTTCGTTTCTAGAATGATTTCAGAGATTTGTGCCCATGGAGGGGAAATAAAAAGCCTAAACAGGTTATAAAGAAAATCACACTCAAGGATCCTTACAGCTACATCAGCAGCGTTCTGCCTCTGTCTAGTCTGTGGGCCGGTAGTTCTTCCAGAGCTCCTGTAGGGAGATGCTCAACTTGGGATGTAATCCACACGCTACTTCCACACGGGGCAGAAGCACACACACAGGAAAACGTCAAGGCTTTCAGTAATGAGGGTACCTCCAAGGCACCCTTGGACTCTCCACAACCACACCATATAGTTAGAAGACTGAGGTCGTGTCTGTGAAAATAACAACGATTTTCAAAACCTGCTTGCCACAGGCAAACCCTACTTGGCCAACATCTTGCTGAACCTTATTTCTCAAAAAAGAGGGACAGTTCAAACAGACTACATGGAGACCTGCTGCTCAAGCTAATTACATAGATATGGTAAGTTCTGTCCAGGTACTGGTAGCCTACCAAAGCTGTAGAAATCTAGGACTGCGCTCGTCCACATCAAACCAAAGATTCCCATCTCTTCCTGAAAGGGAGAGTCCACGCGCACCAGGCAGCATTCCAAAGGCAGCTGGTTCTGTCCTCCTCACTGAGAGAGAGCCTGCTGAAACGGCGACTGTGATCAAAACTCTTCTCTCCCTTTGTGAGGTCCCTGAATCCCTGAAGCGCTGCCGCACTCCTCAGTGCATCTCTCCATGAGTTAGCACTTGATTGCATACTGTCTGCACTCCTCAGTGCATCTCTCCATGAGTTAGCACTTGATTGCATACTGTCTGTAATCCTTCGTTGTTCCACGTGTGAAAGTTTTCATCACTCCCCAGAAGAGACGCTTCTCCTGGCGGGCGTATATTTATATTTATATCCTGGACAGCCCCGGACATAGTGCTGAACATGTAAGAAGTGTTCCTTAGGCCTGACTTCTAGCACGACTTTTACATTCACCACAGAGCCCGTGAGTCAGGAGTACCTGAAACACGGTAGCCTGGGCCAGCTTGTGAGACCTTCAGAGCCAAGGGCATTGCTAGAGCTCCAGAGTCTCATGCCTGTTTTTGTCTTGAAGATAAACATGTCAGTCCACCACCAGCATAGACTCTTATCTGGACCCAGATCAGAGAGAGAATACCAGGGAATATCAGAAGTGACTTTGTTGTCATCATCTTAAAAAAGACACTTAGGCTGTTGCTGGATGTCTGTTTATGGCAAAGATGTTCACCAGAACCTATCAGTCAACTGCTGGATGCCGTGATGATTGGAGCACTTTCTGAATCGTGTGGAACGTTAAACAATAAAGTTCAGAAGATGTGATTTCTGTTGCTTTTCAGAAAAAGGAACATTTTTTCCCCACCCCTTCCAGAAACTTTGAAAAAACATTTTACACCATTATCTGGCAGTTACTAAACATGTCTGTTGCTCCGAGAAGCTCACCAGCCTACTGAAACGTAGGTGGTTGTGTCGCAGTCATTCTGCACAGGGTCTTTTTTGCTTCTCGTCACTGAAGGCTGCGGTGAGGCTGTGAAACTTGGATCTTTCCCACCATCTGTGCAGGAGGTTGCACTCCCTTCTTTTAGAAGCTCACGACAGACCATTTTTGGATACACACACACACACAAGCCCCAAGCAGCGTGGGCTACACAGGAAGTCATCAGGGCTTCAGGTAGGGGTGACTGCTCATGCAGGAACTTAGAAACTGACTAAGAACACACCTGAAGACTAGCCTCATGATAGGAGACTCCCCACCCCCCTGCCACATAGAGTTTGAGATTTTCCATCAAGAACTAAAACTGTCATTCGTCACTTGTTCGTCAGCCAACAACGCAGCCTTATGAGACAGTGTCAGCTTCATGGGGAGCCATGGGGGTGGGGGCAGCTGTAGCCTCAACTCCAGGCCAGATAGCACTAATCCTCTGGCCTCTGTAACTTGGACCTGCCCCCAGCTTCCGTGCAGCTCCTGAGCAGTCGCATCAGTGTGTTGCCTGGGGCAATTTCACCGAGGTCAGCTGGTGACCAGAGTAGTCTATCCAACTGGGTTAAGAAAAGGAGCGATACTCCAGAAGGGCAAACCTGACTAACTTTTGATAGAAAAGGGAAGGTAGAAGAAACTGCTTTGAGGAATTTTCTTCAGAGTAAGACAAGGATGGTCAAGTAGAACACTTGGTGCATTTGAGCAAAGACTTCTGCTGCCAGGGAACTACGGAAAGCAGTGAGGTGCTTACCTCCAGACACTGATCAAAGTACCACCTGTTCCGAAGAGGGAAAGAACGTTGGTTGGGTCCACCTTGGCCTTTTTGCACCACAACTCCATGCCAACATAATTCTGCCATCATTTCTTTTTATGGAAATTATAACCTGTTCCCCCATATGTAATTCCCATTTTCCTGGGATATCGTACTGACTGGGACGGCTATGGGGGTTGCTCCAGGTCTTCAGCACATGGACTCCTTGAAATAGCTGTTTGAAGACATCTTTTCTGAAGAAAACAGGCTACTGCTGTTTATTAAAACTATTGGCATTGAATTCATTTATCAGCTGCTCAGCACAAAGTATAATTGGGTCATGGTCCAGAAGGCTCACAACATCTAAATTAGTGCTTGGAATCGTCATTCGAAAGTCCTCAACTGGCTGAAGTCTGTTAACAGTTCAAGGACTCTAGTTAACTGTTGGCATGCTAGCTGACCCAGTGGAAATATTTGAGAGGTTTTTAAAAATATTCCTTAACCTTGCCAGGAAGAGAAGTAAAATTCTTCAGGTTACTGGGCATTTGTTTCTGCTTCATCCTGGCAGACAAGGCTTAAAGCCTAAGACTGCAGATGTATGAGGCATCTTGATATGTAGGGCACTTAGTATTTTATTAAAGACATAAAAGTGAAACTGCTAACGATGTACAGACAGGTTGACCCTTTTGATGGGTAAGAATTCGCATCTTACCTGGCATCAGAAAATTCATTCCAGGAAGGAACCTCTTCAATGTGATAAATATGGCAAAGCCTTTAATCACATTTCAGCTCTTAGCATCAAAAAGCTCACTGTAAATAAACATTGTTAATACTATCTGTGAGGAAAACTTTCCACGTATAGCGCTCATTGCTTTGGACAGAAAAGGAATTCCTTCAGTGTGTTCCAGTCATGTAACGAATTTCAGAAACACTGTGGAGAAAGCTCAATCTTAACTGCAGAGGATCCACAGAAGAAAAAAAATGTGGGGAAATGCTAAAGAAATAGCAAAATGTACAATTTCTGACAAAACTTGTTGCTCTTGGGAACTTCTGTATATTTTGTATGATCATGTCAGTGTCTGTGTTTTGCACCCCAGCCCCTGTCACTCTGTATACTCCCTGTACCAGATAATGTATTTTTATTTTAATCTATTTGACAGAACACATCAATCACTCCAAAAGAGCAGTGTTTTGGAGTGAGTAGTGAAATTGACACAGACAAAAAGTCAGTTCACAGAACTGAGGAGAGGGAACAGTGAGGGGAAAAAAAAAAACTTCATAGTTTGGTGCTTATCAAGTCAAGAACTTAGGAATGAGTAGATTCGTTAGGAGGGACAGGTGAGTAGGGAACTAAAATGGAACAGTTTGCTATAGACGCCTGCAGTTTCCACAGCCAGAAACTCAACGCTTAGCTGCCAGATCACCGTTTCCAGCAAGGAGAATGGGTTCTCTGAGCTTGTCGGGGGCGAAAGAAGGTCTGCTCCATGAATTGAGAGTAGGGAGTGGACTGGGAAGGCCAGGGGGACCACTAACTATCTTGACCTGGACCAGTGGTGTAAAGCATCATCCTGCTTCCCCCACTAACTCGTACCTCTGTGTTGAGAAAACGTGGGGTAGGAAAACACCAAGATGGACTTTTCCCTGGAAAACAGACACAGATGCATCCAGGCCCTGGCATTGCAGTGTTCCCTCTGTATACCTCCTGTGTACAGGAGTCTCCTGTATACCTCCCCTGATCCCACTCACCTACCCTGGCCTGTGATTATTAAGAGAGGGCTTGAGAAGATTCACAGCTGAGAAAGAACTTTTTTCTGTTCTTTATCCTAGAGTTGATCACCTTTTATTGCAGGGTCTGGTCATCCTGACATACTCATCTAAAGCTAGCTAACCAGGTTCATCCTACCACCCTCACGGAAGAATCATCATGTAAATTGGTGTAATGGAATTAACCCGTAGTCAGACAGTGACAGCAATACCTGCCAGAGAAGCCATGTGTTTGTGGTCCGATTCTGTGCAGCTGCTCAGAAATAGCGATGAGGGGGCCATGGTGCCTGAACTGGGAAACCAAATGCAGGTCTGCAGATTGCAAAGCAAAATGTAGGATCAGAAAAGGAAAGTAAGTGGTATAAATAGATGTTTTTGTAGAAGTTAGAGTAGATTTTTATTTCAGCTACTGCTGGAGAATATAATAGCATTGTTTAAAAAATTTCTAACATTTGGGTTTCATTCCTGGGATGGACACACTACTGTACATTGAAAAGTAGTTACTTATTTTGCTATTCAAATTAATTTTTTATTCTATCTAAAACTGAAATTATCTGTTTTACTTTTCAGAGCTTTGTAAAAACAAACTTGAAGTTATAGGGAGGTAAGCCATCTCCGATTCTGCAGGTCAAACAGAAGTTGGGGAAATATTTTAGACATCACATAATAAGAATGTCTTAACATGAGAACTTAGTTTCATATTGTCTGGTTCTGTTTAATAGTGGATACCACAAACCTCGTGTTTTTCTCTCATCCTGAAACCATGGAAGGTAAAGAGACATTAGATTGACTTCTGAACAATGGTCTGTTATTTAACAGGTTTTTCTTTTAATTGTTGAGTTTCTCACCTCCATTTACTAAAGAATCATGACTCACTTCAAATTGCACAGCAGTCAGCAAAGTTAATTGGCCCTAAATTAAATTTTCTCCCTTCAGCAAGCACTCATTAAGCAGTTAGGCTGAGTGTGTTAAGATGCAGAGTTAAGTTTGTGAGGTATTGAAAGGTGATGCTGAAACTGGGATTTCATTCCAGCGTCAGATGTGGGTTTCAAGTTCCTTTGGTCCAGGGAAGGGACTGGGCAGCCACAGGTGCCCCCAAGTTGCTTTTGGTTATTCTCCCAACAAGGTCAGATGTGCCATGAAGGAGAGTGGAGAGGAGGGATGTAGAAGACAGACTCCAGCTGCTTAAGAGTGACAGGGGGAGCCTGGGGGAGAGAGGAGAGAGACTGCCCATGAGTTGTGGACCAGTATTCGCCCGCCTTTCCACCTGGCCCCTGCCCCGCCTGAGCAAGGACAGAGCATATTAGAGATGCTTCTGCTGGTGGTAGGGGTTCTTATGTGAAAACAGATATGTGAGGGGGGTGGGTGGGAGGAAACAGGTTGTGATGATACAGGAAAATCTGTGAGTTTAGGGGCAAGGGGTGGGGTATGCAGGCAAAATCAGCAATTATTTTAAAATGAACATATGTATTTTTATTAGCTTTTAGTTAAATAGAGATTATTACACCCAGGTCAACACGATAAGCCTAAATATATATAGAGAACTAACTCAGGCATTGTCTTGTTTATCTGTAGACTGAATAAAATAAACCTTTCCTGTTTTGTCAGTTCCTGGTATCTTCGTTTAGAATAAGTTAGACCAAAAGAAGACGCTCGCTTGTCTTTGTACACCCCCAGAGTTAAGTTATTGCTGTTCAACCCTGGCCTTTTCATTTCACTGGTCTTTGAAGAGTCCAGGTGCTGGATAGATGTTCAGTAAATGATTTTTTAAGTGAACTTGTTTATTTAAAATCCTCTTAACATTTATGGAAAGACTTCTTTCGGTAAGTAATGGGATCTTAGAGGGAAAGTGGTTTTTTTGTTGTTGTTGTTAAAGCTAAGAAACTCCTCCATTGAAGAGTCTTTTGAAACCTTGCTCGAGAGCTAAAAGTTTCAATCATGAAAAATAGCAGCAAACTGAAACTGATATGCACTTGCAGTCAATGGTCCATTTCAGGAGGCTGGTGCTGTCTGACAGAGAAATGTTTAGTGAGGTCGGGGAAGGAGATGGTGGGGATTTGTAATAAATATTCTCTATGTTCTCTTCCGAATCTTGGTAAAACAATAAATTATCATCTCTAGGTGGCAATAGTTGTGATGTTTGTGTTTTGTTGTCCTTGGTTGCATAAAATGTACATTTTGGATAAAGAAATAGAAGTATAATTTCAAAGACAAAAACACGTACTGTCACCCACAAACAACCCTCAACCAAATGACATGTCCTAAATAATTTCTCAGGAGCTTAGGTAGCTTCTAAGAGGGCAACAGAATGAAAAGCCGTGGAATAAAAATGCTTTTTAACGATCTCCTAAAACAATTTTCTCATAAAATGAAACCATTAAAATAATCTTTGAGCACTTTATGAATCTTAGAAAACAGAACATCCTAATGGTAAGAACAGCATGTAAAACTGATGGTTTAGATCTTTAAATATGACTTC TCONS_00147148 s 5' 0 TCONS_00147148 s 5' 0 EMBV3_14674 GATGGGGCTTTGCAGTTTGCTAAAGGAGTGAAGAACATTCTTTCATGGAATCTATGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28024 TTTTCTGCAAATATCAAAGCCATGGCTCAGTCCTGGAGTCAAGATGTGAGACCAAGAAAT Variant GeneID:767945|ZNF566:NM_001077017:787_cdna 220^442 2 EMBV3_03927 GeneID:767945 18 GENE ZNF566 MGC128759 ZNF420 zinc finger protein 566 EMBV3_18286 AGTAGTTTAAAATATGAGAGTTAACACCCATGTTGCATGCATTCCACACATTACAATTTG Gene GeneID:533643|ZNF326:XM_002686258:65_cdna Constitutive 0 NULL GeneID:533643 3 GENE ZNF326 NULL zinc finger protein 326 EMBV3_23524 ACCCCTGGTGTGATTATTTCATCTGTTAGCTGTGGCTGTTTTGCGTAGCATCGTGTGCCG Gene GeneID:513125|ATN1:XM_002687862:99_cdna Constitutive 0 NULL GeneID:513125 5 GENE ATN1 RERE atrophin 1 EMBV3_15754 AACTTCGTGAAGCAGATCATGGGGAGGAACAAGCTGAGAGAGGAGGAGCAGCAGAACCTT Gene GeneID:515846|MGC134132:NM_001046213:17_cdna Constitutive 0 NULL GeneID:515846 9 GENE MGC134132 NULL hypothetical LOC515846 EMBV3_21876 TGAAGAAGGGAGCGCAAACCCCCCAGACATGAAAAGAACTTCACAGCCGACGTCCAGAAT Gene GeneID:527833|CAGE1:XM_002697621:142_cdna Constitutive 0 NULL GeneID:527833 23 GENE CAGE1 NULL cancer antigen 1 EMBV3_37564 GCTGCGTCAGGATTTACTCAAGGAATAAGTGGTCCTCTAAGCTGTGGTAGGAATGGAGGC Gene GeneID:100294770|LOC100294770:XM_002698628:7_cdna Constitutive 0 NULL GeneID:100294770 27 GENE LOC100294770 NULL hypothetical protein LOC100294770 EMBV3_39025 AGTCACTCCAGGACCCTTTGTTTTGGACGTAGCTGATCAACGGTGGAAAGAGACCTCAGC Gene BVT0102_059328 + 0 NULL GK000024.2:33841484-33886946 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32183 GTATACAAATGTCAAATCACTGTGTTGTACACCTGAAACTAATACAATGTATATCAACTA Gene GeneID:614455|RETSAT:XM_002691367:224_cdna Constitutive 2 NULL GeneID:614455 11 GENE RETSAT MGC159377 retinol saturase (all-trans-retinol 13,14-reductase) EMBV3_05312 ACCAGAGACACATGGAAAACCTCCATCCCCCCAGGGACGTGTACTTCTGAGAAAGAAGAT Variant GeneID:533613|RABEPK:NM_001035399:32_cdna 592^925 2 EMBV3_24870 GeneID:533613 11 GENE RABEPK MGC133858 RAB9P40 Rab9 effector protein with kelch motifs EMBV3_29841 CCTCCCCAACCCCAGCCCTTCGGGCCACCCAGCCTGCATATGTGTTCACTTTTATTTAAA Gene GeneID:528839|MAPRE3:NM_001075917:159_cdna Constitutive 0 NULL GeneID:528839 11 GENE MAPRE3 MGC143070 microtubule-associated protein, RP/EB family, member 3 EMBV3_06867 GCCATTATGACTCAGAGGGTCTGCAAGGAGTTGGCGATCGGGGTCTATACCTATGGTTTC Gene GeneID:539064|LOC539064:XM_002693111:513_cdna Constitutive 0 NULL GeneID:539064 15 GENE LOC539064 NULL similar to rCG40001 EMBV3_19889 CTACGCTTTAGAGTCCTTATCTACTGCCGCAACCACCACCCTCTGCCATTATCTATACCC Gene GeneID:787482|MANBAL:NM_001114861:1399_cdna Constitutive 0 NULL GeneID:787482 13 GENE MANBAL MGC143151 mannosidase, beta A, lysosomal-like EMBV3_37016 CCAAGAGTCAAACTGATCCTGTGGGATGACTGAATTGCCCGCCAAACAGAAGAGAATGGG Gene BVV0102_136832 + 0 NULL GK000030.2:28319669-28703474 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246625 TCONS_00246626 TCONS_00246629 TCONS_00246628 1 XLOC_151049 Coding TCONS_00246629 XLOC_151049 Coding Coding - X:28316619-28322061 - TSS184861 3795 1 TCONS_00246629_3 340 0.145454545454545 4 0.303253078478221 0.0198728634681952 0.0137552943432815 0.014435350352472 0.0117615728846997 0.00920551328098293 0.00419344752508911 0.00404642080369065 0.00464910812430248 0.00785051949523011 0.000868963229527432 0.000103016506995529 8.21253395180944e-05 0.000146398882140423 0.00137233599975777 0.000870709424309312 0 0 0 0.00740830255445851 0.0128217638995941 0.00421832991156613 1.28156221196028e-10 0 0 0.0100072589412444 0.00895428626104765 0.00790607465690239 0.000544147057955239 5.98063261052701e-08 6.55463146126266e-12 XM_005200593.1 LOC508073 PREDICTED: Bos taurus melanoma-associated antigen 10-like (LOC508073), mRNA. 0.0 1846 100.00 0.269301712779974 NM_001011543.2 MAGEA10 Homo sapiens melanoma antigen family A, 10 (MAGEA10), transcript 2e-162 578 71.25 0.287747035573123 TCONS_00246629_3 sp|P43363|MAGAA_HUMAN MAGAA_HUMAN Melanoma-associated antigen 10; 1e-125 369 55.71 0.979411764705882 2 coding 1 1 1 1 0.204287528812249 0.329968720345335 -0.0752333115367967 0.329229319472678 AGGAACCTACCAGAGAGCATTTAATCAGGAAGGCAGCAGCCAAGAGAAGTACATTTATGAGTGAGGACTGAGGAGTCCAACCCCCGCCCCCCAGAACCGTGTGGTCCCTGCAGTACCCTGTTCCATCCCTGATGTCAATCCTGGGAGACTCCCAGTAGGTTTGTCGGGATCTGCACTGCCCTCCTCTTTTCTGACTCTTGCGAACTCCAAGGTGACCCGTGATTAAGGGAAGTGGCCCTCAGGGGGAGGGGGCGCCGGCAATTCCAAGAGTCAAACTGATCCTGTGGGATGACTGAATTGCCCGCCAAACAGAAGAGAATGGGTCTCCACTTCTTCTGAGCCCGTTTTCAGCTCTCGGAAGCCCTGTGCAGGGTCCTTGGATGTAGTTGCCGACTTCAACCTTGGGAATCTGAAGACGAGGCTTCAACTGCAGTGATTGCACTCAGGTCAGCAAAGGGACGAGACCCAGACTCTGCCAGTTGTCAGAGGGAGGATCCTGAAGAAACTGCAGACACCTGCCTTTTCCATCTGCCTCATGAGGCCCCAGGAGTAGCTGTGACGACACTGAGCAGAACCGAGGGGTCCTCACTGCAGAGAAAGGGTGGCCCACGGAAACCTGCCCTGCTCTTTGCTCCAGCCTGGGAGACCTCAGGCTGACAAGAACAGCAGCCTGTGACACCTGGGAGCTCCCCTAAAGAGGAGACCTGGTCCCATTGTCCTGCTGGCTACATCCAATACCAGCCATCATGTCTCTGGGTCAGAAGAGTGAGTGCTGCAAGCTTGAGGAAGACCTTCAGGCCCCAAAAGAGGCACAGGGCCTAGAATGTGTGCAGGCTCCCATGGCTCAGAAGGAAGAGGCCACCTCCTGCCCCAAGTCCACCATCTCCTCTTCCCTTACCCCATTGATCCCTGGAACTACAGAGGAGGTGCCTGCCACTGGGGCACTGAGTGCTGTCCAGAGTTCTCAGGGAGCCTGCTTCTCACCCACTGCCACCTCAGCCACTCCACTGAGTCAAACTGATGAGAATTCCAGAAGCCAATTGGAGGAGGAGCCCAGCATCTCCCAGACTCCACCAGATCCTGAGTCTTCGCTCAGTGGTGAGCTAAACAACAAGGTGGCTGAACTGATGCAGTTCCTGTGTGTCAAATATGTAACAAAGGAACCCATCACAAAAGCAGAAATGCTGAGGAGTGTCATCAGAGAACACAAGGAAAACTTCCCTGAGATCTTCAGCAAAGTCTGTGAGTGCATGGAGGTTGTCTTTGGCATTGAAGTGAAAGAAGTGGACCCCACGGGACACTCCTATGAGCTTGTCAAAACGCTCAACCTCACCTATGATGGGATGCTGAGTAATGATGGGGGAATGCCCAAGACTGGCTTCCTGATACTTATCCTGGGTATGATCTTCATGGAGGGCAACTGTGCCCCTGAGGAGAAAATCTGGAAAGCATTGAATACGATGGGGGTGTATGCTGGGCAGGAGGATTTCATCTATGGGGAGCCCAGGAAACTCATCACCAAAGATTTGGTGGAGGAACAATATCTACAGTATCGGCAGGTGCCTCACAGTGATCCTCCACGCTATGAATTCCTTTGGGGTCCAAGGGCCTATGCTGAAACCAGCAAGATGAAAGTCCTGGAGTTTTTTGCCAAGATCAGTGGGACTGACCCCACTTCCTTCTTATTCTGGTATGAGGAAGCTTTGAGAGATGAGAGAGCCCAGGCCAGAACTGCCCCCGGGGATGATACTACTGGCCATGGCCAGTGAAAATTCCAGTGTCATGTCCAGCAACCTCTTCTGCCCTGAGTGAAGTCCAAAGCAGTTTCTTCAGTCTTCATCTGAAGACAACAGTCAGTGTTCCATGTAATGGAGGGCTAGGGTGGAACAGTCTATTAGCATTTTCATGTTTCTATTGTATATGGGTGATTTGGACATATAACTTTTTTTTTATTTGTTTTTCTCCCCCAAATATTGTTTAATAAAGTTTAATTAGCTCCAGAATCTAAGCTTATGAGTGACAATGATCACACAGTTATAGCTGTTTATCACATATAAGAGTTTTACAATTTTGCAAACACACTGAGAAACCCCCCAACTTTCCTTGTGATCTGAAACAAGGCATTAGAATAGGATTTGCTTGGAAATGTGAAAGTACCCAGCAGAAAAGTTAAGGATGAAGGGACTTCCTAAGTGGCTCAGTGGTAAAGAATCTGCTTGCAATGCAGAACCACAGAAGATGGTGGATTCAATCCCTGGGTCAGGAAGATCTCTGCAGAAGGAAATGACAACCCACTCCAGTATTCTTGCCTGGACAATTCCATGGACAGAGGAGCCTGGTGTTCTATAGTCTGTGGGGTTGCAAAGAGTCAGACACAACTGAAGCAGTTAGCATGCATGCATGCAGGAATACAAGAAAAGTATAAAGGATGGCTAATTAGGTTCACTTATCTCTTCTAGTCTGTAGTTTTTATTAAATGATACATACCTGGATATGCTTGGCTTATTCAAGAACATGAGAGAAAGTAAATCTTAAATCTTTCTCACTGATTCATTTCTTTGCCAAACATGAATTGATGGAAAGCCCTGTGTTAGAGATGGTCATCCTAGCCTAAGCAGGACACATCCCTCCCAGAGATTGGCAGGGTCTAGAAGCAGCAATCAGATGAAGAGATGGTGAGGCATCCTCTAGGAGCCATTAGGGTAAAAGAACAGGTGAGAAGGTGGGGTTCCAGGGAAGAGCAGGTAAGTATAAATACCCTGAGCCAAGATGGCTTAAGGCTTTAGGAAACCACAGTCGCTTATGTAGAGGTTCATTTTCAGTTATGCTGGGTGGTGGCAGGGGCCTAACTCTCAAAAGCTGTGTCTCACAATTGATAGAGGGTTTCCCTGGTGGATCAGATGGTAAAGAATCCACCTGCAATGCGGGAGACCTGGGTTACATCTCTGGGTCAGGAAGATCCTCTGGAGGAGGGTATGGCAACCCACTCCTGTTTTCTGGCCTGAAGAATCTCCATGGTCAGAGGAGCCTGGCAGGCTATACAGTCCATGGGGTCACAAAGAGTCAGTCATAACTGAGTGACTAAGCACAAGCACAATTGAGAGAAAAGTCTGGAATGGAGGTGTTCTTAGCAGTTCCTTTTGGATCCTGGATAAATCAGAGGGCAATCCCTACCCAAGCAAGTATGGAAAGTGTCCTGAATTCTTGTAAAACCCCAGTGTACGAACTAGGCGTTCTATACAAACCGTCAGCAAGTATTTCCTGACAAATAGGATAATACTCTCTGGAAGTGATGCCAAGAAGTTGCTAGGCTGGCATTCTTTTCCCTGGCCTGAGAGACCCAGAGACTTCTACATTAAGATGACATTGTAATTAGGTTATCTTGAGTGCACTGTGGCCAAATCTAAACAAGAACTAGATTTTCGATCAGGGGAAAATGAGAATACCATTTTTGGATGGGAGAACAGCTGGGATGGAAAAAAAAGACTTAGTCTTTGACTTGAATTCTAAGACTTTTGAGTGGAATTCATCTCCGGAAGACTAACCCACACCTGATTTAATTACATATTATCCAAGGGGAATTTTATGGAATTTTGTTTACAAAGCAGCATATTTGACTTATTAAGTCTCTGATGTCTTACAGCACTATATATTCTGAGAGGTGTTCAGTTCAGTCGCTCAGTTGTGTCCGACTCTTTGCGACCCCATGGACTGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGCTTACTCAAATTCATGTCCATTGAATCAGTGATAAATCCAC TCONS_00246623 s 5' 73915 TCONS_00246623 s 5' 77003 EMBV3_00223 TATAAGCATGGACGGCTGCTCTCCAAGCAGAAGGAGAAGATCCGGGAGAAGTTCGTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06252 TGTTCACACTGAGGCCAGTTTTCCAAGTTTGCTTTCACAGTCATCCTGTGCTGACATGGG Gene GeneID:507013|LOC507013:XM_002692628:84_cdna Constitutive 0 NULL GeneID:507013 14 GENE LOC507013 NULL similar to Protein FAM91A1 EMBV3_40000 CCTTGTCAGAAACATATCCCAACCAGGAGCAGGGGCATGAACTACAGTGAGAAGCTAACC Gene GeneID:507185|OSTBETA:NM_001077867:86_cdna Constitutive 1 NULL GeneID:507185 10 GENE OSTBETA MGC148361 OSTB organic solute transporter beta EMBV3_15633 TTAGAGCAGCGTTTTAGCTACTAAAGTTAACATGTTTATTCTTTCCTTCTCACATGCTTG Gene GeneID:540423|MPZL2:NM_001015673:122_cdna Constitutive 4 NULL GeneID:540423 15 GENE MPZL2 EVA1 myelin protein zero-like 2 EMBV3_37522 AGTGCCAGAAATATTTAACTAGGGAGCTGCAGTCCAGATAAAAGATACCGTAGCGTTGAC Gene BVV0102_034402 + 1 EMBV3_03609 GK000030.2:35755938-36106443 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26570 ACCCCAAACTTCAAAGGCTTCCAGGCAGCGGTACGTCTCCTGTGTGCTTGGATGTCCCTA Variant GeneID:317658|HMGCL:NM_001075132:48_cdna 370^518 1 EMBV3_41760 GeneID:317658 2 GENE HMGCL NULL 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase EMBV3_26842 TGGATTCGGAGGAAATGTGATCAGGCAGCAAGTAAAGGATAACGCGGAATGGTACATCAC Gene GeneID:533630|PSPH:NM_001046355:362_cdna Constitutive 1 NULL GeneID:533630 25 GENE PSPH MGC137208 phosphoserine phosphatase EMBV3_01637 TGGCCTTGGGAGAAATGGCAGCGATGTCATGAGCTGCAAATTCTGTAACTTTCCGTGACC Gene BVV0101_001397 + 0 NULL GK000024.2:60491969-60532424 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06707 CAGAGTCCTAAAGTTAGACCTCCTAAATTGACAACTCACTTCTAAACCTATTTCTGCCAC Gene BVV0102_062052 + 0 NULL GK000022.2:9043115-9674588 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07389 TGTACCACTGACAATCTGGACCCCTTCCCACCCAAGTCTCTGACCTTGACTTCCTGTCTT Gene GeneID:522979|MFRP:XM_002693027:248_cdna Constitutive 0 NULL GeneID:522979 15 GENE MFRP NULL membrane frizzled-related protein EMBV3_18760 GCTGGAGAACGGAGAAAGAAGGTGCTGGCAAGGCGGCGGTGGTGTTCGTAGTGGTGCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35942 GGATATCAATACCTTCTCCATGCGTGTCAGTTCATTGGAAACCGGAAGGAGCTTAATGAA Variant GeneID:404165|NOP56:NM_001033622:814_cdna 598^673 1 EMBV3_42883 GeneID:404165 13 GENE NOP56 MGC128411 NOL5A NOP56 ribonucleoprotein homolog (yeast) EMBV3_26747 CCAGCCTCCTAGTGTAACCCTTCCCGCTGAACTCCCGGATCGACGTATTAACAAGACTAA Gene GeneID:790091|DMWD:XM_002695097:548_cdna Constitutive 0 NULL GeneID:790091 18 GENE DMWD NULL dystrophia myotonica, WD repeat containing EMBV3_20703 TCTCACAGCGAGGCATCTAAAGGGATGTTTTCTAGGACGTGAGAACCAGCGCCAAGTCCT Gene BVV0102_077532 + 0 NULL GK000025.2:13344321-13455796 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33573 TGTATGAGAGAGAGGACCAGAAAGGCCTCATTGCGGAGCTGAGCGAGGATTGCCCCTGCA Gene GeneID:281722|CRYGC:NM_001013595:11_cdna Constitutive 0 NULL GeneID:281722 2 GENE CRYGC NULL crystallin, gamma C EMBV3_31946 CGATACCACAACAGATAGTCACAGCGCACAAGGAAAGAGAAAAAGTAATGAAACAACTGC Gene GeneID:540872|TRM1L:NM_001098121:102_cdna UTR3_Alt 2 NULL GeneID:540872 16 GENE TRM1L MGC148834 TRM1-like protein EMBV3_06528 GAACACCAGGAGCTCAGTGACCCTCACAAGATTATGGGAAATCTCAACCAGCTTCAGGAG Gene BVV0102_216042 + 0 NULL GK000025.2:37470389-37494181 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14181 ATAACAGAAGAGAACCAAATACCACCTTTAGAGGAACACCAGCAAGAAGCCATGCCAGTG Gene GeneID:616081|ALS2CR11:NM_001078059:146_cdna Constitutive 0 NULL GeneID:616081 2 GENE ALS2CR11 NULL amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 EMBV3_32112 AGTCAACTTGCACGCGCCAAGACAGACCCTGAGAAAGTCTCAGCACTGGGATGAAATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05759 ACCTGGCTAAGAAGTTACATAAAGCTGTTCCAGGCCCCATGCCAGCGCTGCGGGAAGTTT Gene GeneID:525389|MED27:NM_001040546:130_cdna Constitutive 3 NULL GeneID:525389 11 GENE MED27 CRSP8 MGC134262 mediator complex subunit 27 EMBV3_33785 GAGAAGAGTGGCATTGTTTGACCCTTTTTGGTAAACCTCCTCCGCATCTGGTTCAGTGGG Gene BVV0102_087796 - 1 EMBV3_28531 GK000016.2:81552389-81602564 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08790 AGCCTTGGAGTACAGAATGAAGCAGGCCAAAGGCTAACGGAGGTTTGCCAAGAGAACACA Gene BVV0101_011141 + 0 NULL GK000002.2:6220197-6344222 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143770 TCONS_00107343 TCONS_00100623 TCONS_00108847 TCONS_00046950 TCONS_00008182 TCONS_00069870 TCONS_00069871 7 XLOC_088190 XLOC_063254 XLOC_060865 XLOC_064752 XLOC_027087 XLOC_003742 XLOC_042073 Coding TCONS_00069871 XLOC_042073 Coding Coding ABL2 16:61958535-61993264 j TSS52000 2275 2 TCONS_00069871_8 118 0.805274725274725 2 0.934548491131076 0.000316281037163949 1.04239376193623e-20 0.000141714384285714 0.000470988810645715 1.91188799234679e-20 1.1628192885671e-19 0.000420541917701693 1.75232611885552e-08 7.24061854372516e-05 0.000624686306380099 0.000351421648343804 3.41410623812826e-21 0.000168984583999539 0.000393289866047109 1.51560579422471e-09 1.03164977323583e-15 0 0.000156833909528474 4.22441405854581e-21 9.30519238285751e-19 0.000105358197431803 4.79202677861661e-10 0.000484036393311502 0.00108908982326882 0.000269554395533124 8.82271415486925e-05 4.89336369290205e-05 2.36423619088243e-189 6.71895633137722e-05 2.1149544199385e-24 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 946 86.82 0.344175824175824 NM_001136001.1 ABL2 Homo sapiens c-abl oncogene 2, non-receptor tyrosine kinase (ABL2), 5e-148 529 86.52 0.190769230769231 TCONS_00069871_8 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-06 46.6 26.17 0.838983050847458 1 noncoding CCCACGCTCTCCCAGTGCTCGGTGGTTTAAAGATGGCGGCGGCGGCAGCAGCGGCAGCATTGGGGGCGCGGAGCCGCGGGATGGGAAGGGAAAAGGAGAACCTGTGAGGCGTCGGGAGGCAGCGCGGCGCCTGCTGTGAGGAGTCGGGTGCGGAGCCGCAGGCTGCCGGACCGCTCAGGGCCGGGGCCTGGGTTGGGAAGGAGAGGCCGGAGCAGCGCCTGGAACCCCGAGGCCAGAGCCGAGGAGGAATGTGACCAGGGGTCGTCGGAGGCGCGGGAGTAAGCTAGCGCAGGGATGGGGCAGCAGGTGGGCCGCGTCGGGGAGGCTCCGGGGCTTCAGCAGTCGCAACCCCGCGGGATCCGGGGCAGCAGCGCAGCCAGGCCCTCTGGTCGCAGGCGGGACTTGGTGGGGCGCACCGCAGAGGCCGGCTTCAATATCTTCACCCAGCATGGCTCCCCAGGTTCAGTTCCCGGCCAGTGAACTAAGCTCTCTCTTCTTCTGGACAGCTCACTGCTGTCTCTCTGAATGATCTCTGTTTCCAAGGCAAACCATTCCGTATCACAGTAATCCAAGTCTATGCCCCAACCAGTGAGGCTGAAGTTGAACGGTTCTATGAAGACCTATAAGACCTAGAACTAATGCACAAAAAAGATGTCCTCTTCATTGTAGGGGACTGGAATGGAAAAGTAGGAAGTCAAGAGCTACCTGGAGTAACAAATTTTGCCTTGGAGTACAGAATGAAGCAGGTCAAAGGCTAACAGAGTTTTGCCAAGAGAACGCACTGGTCATAGCAAACACCCTCTTCCAACAACACAAGAGAAGACACTACACATGGACATCACCAGATGGTCAATACTGAAATCAGATTGATTATACTTTTGTAGCCAAAGATGGAGAAGCTCTATACAGTCAGCAAAAACAAGACCGGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATCCAAACTTAAATTGAAGAAAGTAGGGAAAACCACTAGATCATTCAGGTATGATCTAAATCAAATCCCTTACGATTATACAGTGGAAGTGACAAATAGGTTGAAGGGATTAGGTCTGAAGGGATTAGAGTGCCTGAAGAACTATGGACAGAGGTTTGTGACATTGTACAGGAGGCAAGGATCAAGATCATCCCCAAGAAAAAGAAATGCAAAAAGGCGAAATAGTTGTCTGAGGAGGCCTTATAATAGCTGTGAAAAGAAGAGAAGCTAAAGGCAAAGGAGAAAAGGAAAGATATGTCCATTTGAATGCAGAATTCCAAAGAATAGCAAGGAGAGATAAGAAGGCCTTCCTCAGCGATCAATGCAAAGAAATAGAGGAAAACAATAGAATGGAAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCACAATAAAGGACAGAGGTGATATGGACCTAACAGAAGCAGAAGATATTAAGAAGAACTATACAATAAAGATCTTCATGATCCATATAACCACCATAGTGTGATCAGTCCCGTAGAGCCAAACATACTGGAATGCAAAGTCAGGTGGGCCTTAGGAAGCATCACTACAACGAAGCTAGTGGAGGTGATGGAATTCCAATTGAGCTATTCCAAATCCTAAAAGATGATGCTGTGAACATGCTGCACTCAGTATGCCAGCAAATTTGGAAAACTCAGCGGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGTTCAAACTACCGCACAATTGGATTCATCTCACACTCTAGCAAATAGTGCTCAAAATTCTCCAAGGCAGGCTTCAACACTGTGTGAACTGTGAACTTCCATATATTCAAGCTGGATTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATGTGTTGGATCATCAAAAAAGCAAGAGAGTTCCAGAAAAACATCTATTTTTGCTTTATTGACTACGCCAAAGCCTTTGGCTGTGTGGATCACAACAAACTATGGAAAATTCTTCAAGAGATGGGAATACCAAACCACCTGACCTGGCTCCTGAGCAATCTGTATGTCGGGCAAGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATCAGGAAAGGAATACATCCAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAAGTGCTGGACTCGATGAAGCACAAGGTGAAATCAAGATTGCCGGGAGAAATATCAATAAC EMBV3_36710 GTGTTTGAAAACCCGAATATCCCAAGAGGAACAGAAGACTCAGATGGTTCCGCGTCTGGC Gene GeneID:508119|IGSF21:XM_002685795:678_cdna Constitutive 0 NULL GeneID:508119 2 GENE IGSF21 NULL immunoglobin superfamily, member 21 EMBV3_16797 ATATGCATTGAGTGTGCCAGGGAATGAAGCAACCGGGCCTATCAGCAGTAATGTTCACAG Gene GeneID:613578|UBXN2A:XM_002691467:329_cdna UTR3_Alt 2 NULL GeneID:613578 11 GENE UBXN2A UBXD4 UBX domain protein 2A EMBV3_43777 AGCTGGAGACCGACAAGTTCGAGTACGGGGAGAAGCTGAAGCGCCAGAAATACGATATCA Gene GeneID:282096|TNNT3:NM_001001441:215_cdna Constitutive 0 NULL GeneID:282096 29 GENE TNNT3 NULL troponin T type 3 (skeletal, fast) EMBV3_34312 CTGAATCCAGTTTGTCCTTAGGTCCGTCCATCCCCTCTCTTCCTGTGAAAAGGTTTTGGA Gene BVT0102_178565 + 0 NULL GK000021.2:22355651-22416827 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120724 1 XLOC_073253 Coding TCONS_00120724 XLOC_073253 Coding Coding CRTC3 21:22413795-22502085 = TSS90115 5036 1 TCONS_00120724_3 588 0.0198570293884035 15 0.943129948238172 0.0014700909132022 0.000548323576580017 0.000874126762764693 0.000483766287572859 0.000962357265759599 7.94696502874497e-05 0.000322282395717693 0.000228674212389269 0.000319995970933758 6.93977569653174e-05 2.40609021091135e-05 7.39387485944816e-07 0.000135614056483035 0.000389553878033814 7.35430112319865e-05 0.0017893453178033 0.000672941175149654 7.39463315249039e-05 0.00128046100827997 0.00188307129729744 0.000548765193284806 6.67464632521654e-05 9.00475124167888e-05 0.000680493216133641 0.000849976237094433 0.00113912030231329 0.000337314761512516 0.000180930685828214 0.000126010990076486 0.000142705036389776 XM_002696570.3 CRTC3 PREDICTED: Bos taurus CREB regulated transcription coactivator 3 (CRTC3), transcript variant X1, mRNA. 0.0 9016 99.98 0.993050039714059 NM_022769.4 CRTC3 Homo sapiens CREB regulated transcription coactivator 3 (CRTC3), 0.0 2094 81.62 0.427521842732327 TCONS_00120724_3 sp|Q91X84|CRTC3_MOUSE CRTC3_MOUSE CREB-regulated transcription coactivator 3; 0.0 981 86.61 0.976190476190476 2 coding 0 0 0 0 0.00754355405150756 0.959797296852611 0.0352941724327469 0.462111733914909 ATGGGTGAAGATGGAGATAAAGATGAATCAAGGTTGGATGTTCAGTTTCAGAAGCTTCAGCAGCTGCGCCTTACACAGTACCACGGAGGATCCTTGCCCAACGTGAGCCAGCTGCGGAGCAGTGCCCCCGAGTTCCAGCCGGTGTTCCACCCAGCAGACAGCGTGCGAGGGACCCGCCACCACGGGCTGGTGGAGAGGCCGTCCCGGACTCGCTTCCACCCCCTTCACCGACGATCCGGGGACAAGCCAGGACGACAGTTCGATGGTAGCACGCTTGGAGCAAATTACGCCTCACAGCCCCTGGATGAAAGTTGGCCCAGGCAGCAGCCTCCTTGGAAGGAAGAGAAGCACCCTGGGTTCAGGCTAACATCTGCACTCAACAGGACCAATTCTGACTCTGCTCTTCACACCAGCGCTCTGAGTACCAAGCCCCAGGACCCCTATGGAGGAGGAGGCCAGTCGGCCTGGCCTGCCTCGTACGTGGGTTTCTGTGATGGTGAGAATGACGTGCATGGGGAAGTGGTGTCTTTCCCCGGCCCGCTGAGGGAAGAGAACCTGCTGAACGTCCCCAAGCCACTCCCGAAGCAGCTGTGGGAGACCAAGGAGATCCAGTCCCTGTCTGGGCGCCCTCGGTCCTGTGATGTGGGAGGTGGCAGCACTTTCCCACACAATGGTCAAAACATGGGCCTCTCCCCCTTCCTGGGAACCCTGAACACTGGGGGGTCATTGCCAGATCTAACCAACCTTCACTACTCGGCACCACTGCCAGCCTCCCTGGACACCGGTGACCACCTCTTTGGGAGTATGAGTGTGGGGAACAGCGTGGGCAACCTTCCCGCTGCCATGACTCACCTCGGCATCAGAGGTTCTTCTGGTCTCCAGAGTTCTCGGAGCAACCCCTCCATCCAGGCCACGCTCAACAAGACAGTTCTCTCCTCCTCCCTGAACAGCCGCCCAGAGGCCTCCGCTGCCAGCGCCTCTGCCCTCCACCCTTCACTCCGCCTCTTCTCGCTCAGCAACCCATCCCTTTCAACCACCAGCCTGAGCGGCCCACCCCGGCGCAGGCAGCCACCCGTCAGCCCCCTCACGCTGTCCCCCGGCCCTGAAGCACATCAAGGTTTCAGCCGGCAGCTCTCTTCAACCAGCCCCTTGCATCCGTATCCTGCCTCACAGATGGTGTCCTCGGATCGAAGCCCGCTCTCCTTCCTGCCCACAGAAGCTCAAGCCCAAGTGTCCCCCCCACCCCCTTACCCCGCAGCCCACGACCTGCCCCAGCCTCTGCTGCAGCAGCCCCATGCCCAGGAGCCGCCTGCCCAGCAGCCCCAGGCGGCCTCATCGCTATCCCAGTCGGACTTCCCGCTCCTCACAGCCCAGGGCTCATCTTTGACCAGCTTCTTCCCAGATGTAAGCTTTGACCAGCAGTCCATGAGGCCAGGTCCAGCCTTTACCCAGCAGGTGCCCCCGGTGCAACAAGGCCCCCGCGAACCACAGGACTCCTTTCATTTGAGACCAAACCTGTATTCCAACTGCGGGAATTTCCCAAACACTGTCCTGACAGAAGACTCGAGCACCAGCCTGTTCAAAGACCTCAGCAGTGCACTGGGAGGCATGCCCGAGGTCAGCCTAAGCGTGGACACTCCGTTCCCACTGGAGGAAGAGCTCCAGATCGAACCGCTGAGCCTGGATGGACTCAACATGTTAAGCGATTCCAGCATGGGCCTGCTTGACCCCTCTGTAGAGGAGACATTTCGAGCTGACCGACTGTGAGGTGATCAGAATGGGACAGGAGGACTTATTTCTGAAACAGCTAAAACAGAACGGAATAGAACCAGCTCCACCCCTGGGCGTTAGTTATCTCGGGCTTCTGACCTGGAAGGAACCCAATTCCTCAGCTCCCAGCTCTCAGATGAGGTCCCATCTCAGTCACCATGGCCTTCTCTCAACCACAGAGCTGGGCACTACCCCTCAGGCCCGCAGCACAGGCCCTGTCGCTGCAAGCCTGCTGCTTTAGCACTTCTGATGACTCAGTCGTCACCACACCCGTGACATCTTTTACTGACCATCTAGCCGGTCGATGAGTAAAAGAAAATGTGTGCCGAGAGGCCTCAGTAGCCATGTATAATGCTCAGAACCACTGATCTCAGTCAACACTGAAGAAAGGACCCAGAGTGGGGGGGCGGTCAGGGGCTGCGGGCCTCTGGGAGCCGACTCTCCTCCAGCGACGGTACCAAGCCCCACAAGGCCTGCCGTGGTTCCGCTGTCTCACCTCGGCACCCCAGGCAGCCATGGGATGTCCAGGGCAGCACGAAGGGCCAGGACTCCCTGAGAGGGCTCCATTGGAACACGAAGAAGGATTTTCGCCACACGTCCAAGAACAGACTTGAGTTGGGCAAACTGAATTCTAATTGGTTTTCTCCTGGTTTGTAATCTCTTCTCTGCTGCTGCAGTACCCCTTTTCCTTTGGATGAGAGGAAAAGGAAGACTATTTTATTTTATTCTGTCACTGAAAAAAAAATCAAAATCCCCTGGTAATGGATGAGCCTGAAGAGAACGGGGCTTCTGCTCGGTGGCTGCGGAAGACAGAGAGGGGGGCTGTGTGTAGGTATCTTACAGGTACACGATGTCCTCTAGACAAGCTGCAAACCATCTAGGCCTCCCTGTCTACAGACTGGCCAGGAGGAGCAGCCGGGGGTCTGGACCAGCAATTGTGCAGCAGCAGAGGGAAGCTGGTTCTCTGTGGAAAGGGGATGTTCCTGTCACCCTACTAGACCGTAAGCTCCTTGAGGGCAGAGACTGTGCCTTACCCATCACCAAACCCCTAGCACCCAACAAGTGCCTGGCACTGAACAGGTGCCGCCGACCCGTGCGTTGAATGCACACACGCGTGAATGAGCAGATGAATGCACGAATGAATGAATCTGCCTCGCTAGGAGGCAGTCTAATCTTTCACTGACCCTCTTCCTCACCAAAGCTTCTCAGAGCTTCAGCTTTTCTAACACTTGTGCCTGTGGTTAAGTGAAGCATACACTTTAAGATGCTTTTAACACTAGGTGACCAAGTCCACGCTTTGGCCACATGCCCTATCCTCCTCAAGGCTACGGACGTGGGTGGACACTGTCCTGTGAGTGCACCTAGGGTGGCTCAGCAAGCTGGGGCCTCCCCCATATTGGGACTCGGGGGTCCCGGCCATCACAAACATCTTCCCTCTCAGACCCATGTTTTGTTCTCAATTGCATTAAGAGATTCACCCTCTGAGGCTGAAGAAATAGTGTATAGTAAAACAAAGGCCTAATTTACGGAACCATCATTAGGCATCAGTACTTTAGCACAAAATGGTATTACTGTATTTCCACCAGCACCTGCCTCCTCTGATTCAGTCTATGCCAGCCCCTGACCAGAAACCCCAATGGGTGGGCTTAAAAGCCATCAGGGGAGGAGTCTGGGCAAAGGGGCCTCACGTGGGCCTGGGAAGACAGCATAGAGTGGACAGACACACTGAAGGAGGGATAAAGATGCTAGAGCCAGACAGACAGCTTCTTCCCAAGGGACACCAGGCACGATGCTGAAGGGTCCACCTAAAGAAGCAAGGCGGCGCCATGTGGGTCTGAACCTGACACATGTCCCTGGTGGCAGGAGGGGTCTGTCACAGGGTCCTGGGCTATTGACCTCTCCAGACCGTCTCCTATTTCCTTCTGTCTTCAGGGGGCTCCCCTCCCTCCAGTCTTTCAAGTAACCCCAGTGGTGCACTGATCCATGTCCACTGTGGAACCCAGGTCTTGGTCTTCCCGCATCACATTTGCTCTGAACACCCCAGCTCTTGAATTAGAAAGACCAGCGCCCTCCCTGCCTGAGCTCTGGCTCAGGAAGGGGCCATGGGCTTCCCCTTCAAAGCTTTAGTCCCAGTTAGACTTCTAGATTGCAGTGACTTTTTGTGAAAGAAAATGGCCTTTCATTGTACACAGCGCCCCAGCGTGCTGAAAGAGCCAGATGCTGCCTGCCTCTCGTGTGTCGGAGACCCCCTGAGATCTGAACTAGCCTTTCAGACAAGGGGGAGTGCTGATGTCATGAGAGGGTTTTTTTTTGTTTTGTTTTGTTTTTTTAATGGAGATTCTAGGATAGTCTGCTCTCTACACAGTGCCTTACCCATGGTGATCACTGGTGTCAGGGTCCCAACTCTCTCTGTCTGCACAGCAGCCCAGCCATACAGCCAGAGACCCCGAGACCTGCAGGACCAAGTGTGCTCCCCCTGGGCATTCACCAAGGACTTGTGGAAATGGAAGGCTCCTGGGAAAAGTGACTTGTTTGGGGGGAGGGTAACGATGACAGTTAGGTTTAGCACTGAATCCAGTTTGTCCTTAGGTCCGTCCATCCCCTCTCTTCCTGTGAAAAGGTTTTGGACATTATACAACCTGCCTTGCTTACCCAGTGTCAAGGACACCCACAGACAGGGGTCACCCTGACCTCCTCACCGCTGCCTTTGGCCCTCAGCATCTGAAATGGCTGCAGACTTCAGAGTAAACTATTTTTCAATATTTAGTTTTTCACAAGAAATCGATGGTTGTACTACTCTCATTTACTAGCAGTTAAACAGCATAGAACTAAAAACCTATCTGTGTTTCTGTTTTTTCCCCCTTCTATACGGTTGTGGTTTTTAGGACAGAAGGTGTCAGGAGAACCTTGGTTATGTCTCGATCAACATGAATTCTCCACTATCCTGTCTCATTTCTCCTAAGTCTACTGTATATTACCTGAGCTGAAATGTATATCCCAGTCCATTTGCATAGTTGAAGACACTTCCTACTCTGACCCTCGTCGTCTTTTCTGATTCACGCACGGACGGTCTGGTCCCAAGCGTGTTTCTTCCACTGCTTTGTGATGGAAACATCACAGCAAAACTAATCAGACTTCCCATCAGTATCCTAGTCCACATGCCCCTCGTCAAACAATATTTAAAGATTGGAAATTCGTATAAAGTAGCTTCCAAGTTTTATAATGCATCGTTTTACATCTTTCGTAATTAAAAGCAGCACAATAAG EMBV3_05896 CCCATATGTCCCCTGAATACATGTGAGGTCCCCTTCTGAATGCCAAACCCACCATTCACT Gene GeneID:100125309|TSC22D3:NM_001103342:2_cdna Constitutive 0 NULL GeneID:100125309 X GENE TSC22D3 MGC139363 MGC140201 TSC22 domain family, member 3 EMBV3_34413 GAGACCAAGAGGGGTCACATACCAACCTGGAAGAGAATGGGGTCCCGACTCAGATTTAAA Gene GeneID:282121|VEGFB:NM_174487:464_cdna Constitutive 0 NULL GeneID:282121 29 GENE VEGFB NULL vascular endothelial growth factor B EMBV3_20564 TTTGTTTCAGAGCACATACTCACGGGCAACTGAGAAAGGAACGCGTATATCCAGGCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02199 TTCCACTGAGCACCTCTCTGTAATTTGTGCCTGATGTGCCTTCCACTGGATTTTGGGGTC Gene GeneID:540421|ARAF:NM_001014964:108_cdna Constitutive 0 NULL GeneID:540421 X GENE ARAF MGC128775 v-raf murine sarcoma 3611 viral oncogene homolog EMBV3_04862 GGTCTGAGAGCACAGAGGTCATGGCCAGCGTTCACATTTTACGATCATCTCCCAACCATT Gene BVV0102_101453 + 0 NULL GK000013.2:35129728-35331908 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045057 1 XLOC_026338 NonCoding TCONS_00045057 XLOC_026338 NonCoding NonCoding - 13:35244582-35245935 - TSS32971 746 1 TCONS_00045057_3 133 2 0.449704142011834 0 0 1.240482024848e-05 0 0 0 0 9.51429421407742e-05 0 0.000226131884315465 3.06861156443197e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00127498404778398 0 0 6.50751328347932e-06 0 0 noncoding 0 0 0 0 0.0478859493269266 0.641878096922532 0.0336212361737169 0.490610574644175 TCCTCACCTCCCAGCCCCTCAGAAGGAACAGAATGGTTGGGAGATGATCGTAAAATGTGAACGCTGGCCATGACCTCTGTGCTCTCAGACCAGCGCCATCCTCATTACACAATGAGAAAGAGTGAGCACCAAACAGTTTTGTTCAAGGTCAGCCAACTTATTAATGGAAGACAGAAAGATCCTGTGGAAATCAGACAACTTTGTCCTCTTTGTGATGGCCCTGGGCAACGATTTTATGAGGAAGATGTTGGAAACTAGGACTGAATGTGGGGCTGAGATTTGTACGTGGATTGAATTTCTCCATTCTCCTCAATTCGCCCATGTGGTGGAAACCCGGGGAGCTGTGTCTAAGCTCCTTCTACAAATAAGGGATCCTGCACCAAATGCGAGGAAGCTCCCATCACCCCTCCTAATATGGAACTCTTTGAGGACCAGCGCCTGGCACAGCTCACACCTGGCATGTCTCCCCCCCAGCACAGCCCAGAGAGGTCTTCAGGGCCATCCATCGAAGACAACAAAGCCATCTGTGCCATGGCTCCTGGGTCTTGAAAGAGGAAGCCGGTGACACAGGTTTTTAATGAGGCTGTCTGTCACTAGAACATTGGCACTTTCAGGGCAAAGAATGCTTTTTATAGATGAAGAGGTGCTGCTTGGGGGCTGAGGAATGGGGGCCCGGGCAACCGCAGATTAGGAAATGCTTCTTCTCTACCTCAACCCCACGTCCTGAATTTGTTCTTGTTGTTACT TCONS_00045058 s 3' 86474 TCONS_00045058 s 3' 85473 EMBV3_38349 CCCAAAGCCTTCAACATCTTCGATCGGGATTTGAAGGAGGAGGTTGGAAGTCGGATTGCA Variant GeneID:522230|C13H20ORF7:XM_002692036:36_cdna 180^239 2 EMBV3_12362 GeneID:522230 13 GENE C13H20ORF7 NULL chromosome 20 open reading frame 7 ortholog EMBV3_01835 GGGGGTGGCAATCACCAAAACAATTACCAGCCGTATTAAAGGGGACACTGCAGAAAACAG Gene GeneID:534770|HNRPDL:NM_001083725:22_cdna UTR3_Alt 2 NULL GeneID:534770 6 GENE HNRPDL NULL heterogeneous nuclear ribonucleoprotein D-like EMBV3_05994 CCTTACTACTCCTTCTCGTTCTCCTGATCCAACTTATTCCACGACCCAGGCAAAGACAGC Gene BVT0102_002394 + 0 NULL GK000004.2:64105543-64131292 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184237 TCONS_00184234 TCONS_00184236 TCONS_00184247 TCONS_00184235 TCONS_00184246 1 XLOC_111304 Coding TCONS_00184246 XLOC_111304 Coding Coding BBS9 4:63868535-64127790 j TSS137242 3006 1 TCONS_00184246_5 716 20 0.988482337784567 3.55206423846376e-05 1.79745475353068e-05 0.000122843621919883 3.06008529002257e-73 0.000105871329942862 6.40466829583059e-05 1.55599761855103e-133 2.52185569162811e-05 1.10290797796556e-69 0.000345346315297015 5.60676325817542e-05 2.03710546765844e-05 0.00108460335215049 0.00142558229417686 0.00129379658302129 1.74749581810749e-18 1.34964600691535e-50 0.000158238880763117 3.26223500187082e-05 0.000103803018673408 3.07465315253492e-06 3.5878524006116e-44 1.62042015897806e-07 5.01376649421476e-34 6.45466121427177e-06 7.27535511950732e-209 9.65281552941963e-05 3.27207561389528e-05 7.94185052876526e-72 1.19400196377793e-14 XM_005205478.1 BBS9 PREDICTED: Bos taurus Bardet-Biedl syndrome 9 (BBS9), transcript 0.0 5142 99.96 0.949767132401863 XM_005249700.1 BBS9 PREDICTED: Homo sapiens Bardet-Biedl syndrome 9 (BBS9), transcript 0.0 3360 88.30 0.876580172987359 TCONS_00184246_5 sp|Q3SYG4|PTHB1_HUMAN PTHB1_HUMAN Protein PTHB1; 0.0 1363 91.35 0.983240223463687 2 coding 0 0 0 0 -0.118402000815278 0.498053090123066 -0.0303827172914486 0.610187916904971 GTGGCTTCGTCCGCGCCAGAGGCGGGAGGCGGGTTTCCTTAGAGCCCGCGTCCAAGTCTGAGGACAGAAAACGGGAATCAAATTAATTCTGTCTCACCGCTAATGAGGAGAAGGCAATGGTTCGCTCCAGCTCCGCCCAGTAGAAATCTGATTCCAACAATCAGGAAAAATTCTCCGTCTTCCGCGCTCCGGAGACACTCAGGACTACAACCCCCAGAAGGCATTGGGACTCTGATATCTGACTTGCGCAGTAGCGTTCGTTGTAAAGTGCTATGACAACAGGGCGAAGATGGCTTGGAGTTAGGCTGGAATCGGGAGGTGTCCCTTCCGCCGCTGCTGTCCTTTTTCTGCTACATCCCACTCACTGCCTCCTTCATCATTTCCTCTTCTTTGTGAGCAGCATTACTTCCCTCTGTTCTCTCCTGCCTGATCTCTGCCACGGACTGATACCGTTTTTCCTGCTCGTCTCTGAGGGTGACAGAGAGAGGATGCGGGAGAGCTACTTGATGGGATCACTCCAACTCCGTGGAGCTGGTGGTGCTACCTGGTGAGACGCTGTCTTTGCCTGGGTCGTGGAATAAGTTGGATCAGGAGAACGAGAAGGAGTAGTAAGGATTGCTTTTCTCTGCGACGTCCGATCTTGCTCGTCGTTCCAGCCCTGGGACCCTGGCAGACATTCTTAAAGGGAAATCTGTAGAGACTGCGAAGGACGGTGGGGCAGGACCCACCTGATTCAGCATCAGAGTGAACGAAAATGTCTTTATTTAAAGCCCGTGATTGGTGGTCTACTGTTCTGGGAGATAAAGAAGAATTTGATCAAGGCTGTTTGTGTTTGGCTGATGTTGACAATACTGGAAATGGACAAGATAAAATTATTGTGGGCAGCTTTATGGGCTACCTAAGAATCTTTAATCCTCATCCTGTAAAAACAGGAGATGGAGCTCAAGCTGAGGATTTGCTTCTAGAAGTGCATCTACGAGATCCAATATTGCAAGTGGAAGTAGGAAAGTTTGTTTCAGGTACTGAGATGCTTCATTTGGCTGTGTTGCATTCGAGAAAACTGTGTGTCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAACCAGTATCAGATCAAATTGATGTATGAACATAATCTTCAGAGAACAGCCTGCAATATGACTTATGGATCATTTGGCGGTGTGAAAGGTCGTGATTTAATTTGTATCCAGTCTGTGGATGGGATGCTGATGGTGTTTGAGCAGGAAAGCTATGCTTTTGGGAGGTTTCTCCCTGGTTCTCTTCTACCTGGCCCTCTTGCTTACAGTTCCCGTACAGATTCCTTCATTACTGTTTCTTCCTGCCATCAAGTGGAAAGTTACAAATACCAAGTACTTGCTTTTGCAACGGATGCAGATAAAAGACAAGAGACTGAACAACAAAAACATGGGTCTGGAAAAAGACTAGTTGTAGATTGGACTCTAAATATTGGAGAGCAAGCCATTGATATATGTATTGTGTCTTTCATTCAGTCAGCATCTTCTGTTTTTGTTCTTGGTGAGAGAAACTTTTTTTGCCTTAAGGATAATGGACAAATCCAATTTATGAAGAAACTTGATTATAGCCCAAGTTGTTTTCTCCCATATTGCTCAGTTTCTGAAGGAACAATAAATACTTTGATTGGAAACCATAATAATATGTTGCATATTTATCAAGATGTGACACTGAAATGGGCCACTCAACTTCCCCATGTTCCTGTAGCAGTAAGAGTGGGCTGTTTACATGATTTAAAGGGAGTGATAGTCACTCTGAGTGATGATGGTCATTTGCAGTGTTCATACCTGGGGACAGATCCTTCTTTGTTCCAAGCTCCAAAAGTTGAATCTAGAGAACTAAACTATGATGAACTTGATATGGAGTTGAAAGAACTTCAGAAAGTCATCAAAAATGTTAACAAATCACAAGATGTTTGGCCCCTGACTGAGAGAGAAGATGACCTGAAAGTCTCTGCAATGGTTTCTCCTAACTTTGATTCAGTATCTCAAGCTACTGATGTTGAAGTGGGAGCTGACCTTGTCCCTTCAGTCACAGTGAAGGTCACACTGAAGAATCGAGTGGCATTGCAGAAGATCAAATTATCAATCTATGTGCAACCACCTTTAGTACTAACTGGTGATCAGTTCACCTTTGAATTTATGGCACCAGAGATGACTAGAACTGTAGGCTTTTCCGTTTATCTCAAAGGAAGTTATTCACCACCTGAATTGGAAGGAAATGCTGTTGTTTCTTATTCCAGACCAACAGAGCGAAATCCTGATGGCATTCCTCGAGTTAGCCAATGTAAGTTTAGACTTCCCCTGAAATTAGTCTGCTTACCAGGCCAGCCTTCAAAAACTGCAAGCCACAAACTAACTATTGATACCAACAAATCTCCAGTCAGCCTTCTCAGTCTCTTTCCAGGCTTTGCCAAACAGTCAGAAGATGATCAGGTGAATGTAATGGGTTTTCGCTTCTTAGGAGGGTCCCAAGTTACACTGCTTGCTTCCAAAACCTCTCAACGATACCGCATTCAGAGTGAACAATTTGAGGATCTTTGGCTTATAACAAATGAGCTTATCATCCGCCTTCAAGAATATTTTGAAAAACAGGGAATCAAAGATTTCACATGTTCTTTTTCTGGATCGGTGCCCCTTGAAGAATATTTTGAGTTGATTGATCATCATTTTGAGTTGCGGATAAATGGTGAAAAATTAGAAGAACTCTTGTCTGAAAGAGCTGTACAATTTCGGGCCATTCAACGTCGGCTGTTAACAAGGTTCAAAGATAAAACACCTGCGCCCCTCCAACACCTGGACACCTTGCTGGATGGAACTTACAAGCAGAGTAATTGGATCATACATCCAGTTTTTGTCAGCTGATGTTTTAAGATAGAATTCTGTTTTTAAAATTGATGTAGAGTTGATTTACAATGTTGTTCTAGTTTATGCTGTACAATAAAGTGATTCAGATACACACACAC EMBV3_27947 GCTTTAATCACACCTGAACCTGTGCTACGGTGGACCTTCAATGGGAGACCTCGTGGAACT Gene GeneID:789978|LOC789978:XM_002695164:779_cdna Constitutive 0 NULL GeneID:789978 18 GENE LOC789978 NULL similar to mCG54481 EMBV3_07330 GAGTGCTAGCTGGGCCCTCCTCAATCTCCTGTAGTAGTTGGTCTCTGGAACTGAATTTCT Gene GeneID:281740|CYP19A1:NM_174305:13_cdna UTR3_Alt 2 NULL GeneID:281740 10 GENE CYP19A1 CYP19P1 cytochrome P450, family 19, subfamily A, polypeptide 1 EMBV3_07890 GTGACTTGAAACCATATGAATGTAAACACTGTGGGAAAGCCTTCAATCGTGTCGGGAACC Gene GeneID:505067|ZNF404:NM_001104965:118_cdna Constitutive 0 NULL GeneID:505067 18 GENE ZNF404 MGC152325 zinc finger protein 404 EMBV3_22796 GATCTTCACTCTTCCAGGAAACTGTCTGATCTACCCTGCTCATGATTACCACGGGCTCAC Gene GeneID:509150|ETHE1:NM_001034344:160_cdna Constitutive 3 NULL GeneID:509150 18 GENE ETHE1 MGC127386 ethylmalonic encephalopathy 1 EMBV3_20100 GTTAACAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTTTTGCATATGATAAG Gene BVV0101_034042 - 0 NULL GK000002.2:80650247-80857694 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204180 TCONS_00183054 TCONS_00138407 TCONS_00019267 TCONS_00132405 TCONS_00173130 TCONS_00183055 TCONS_00138406 TCONS_00018727 TCONS_00148378 TCONS_00189837 TCONS_00110358 TCONS_00220245 TCONS_00056822 TCONS_00021459 TCONS_00046799 TCONS_00048752 TCONS_00206255 TCONS_00222917 TCONS_00229178 TCONS_00169138 TCONS_00116975 TCONS_00057018 TCONS_00118116 TCONS_00057884 TCONS_00002708 TCONS_00091893 TCONS_00087961 TCONS_00177102 TCONS_00089192 TCONS_00066431 TCONS_00252994 TCONS_00116721 TCONS_00149464 TCONS_00218367 TCONS_00129603 TCONS_00023551 TCONS_00207080 TCONS_00156814 TCONS_00054728 TCONS_00141021 TCONS_00233550 TCONS_00220136 TCONS_00183051 TCONS_00199292 TCONS_00229177 TCONS_00206254 TCONS_00186861 TCONS_00218368 TCONS_00196654 TCONS_00220133 TCONS_00025023 TCONS_00251038 TCONS_00167486 TCONS_00251001 TCONS_00186919 TCONS_00068428 TCONS_00091564 TCONS_00229179 TCONS_00037640 TCONS_00233185 TCONS_00025022 TCONS_00243110 TCONS_00120346 TCONS_00035886 TCONS_00218366 TCONS_00037885 TCONS_00091391 TCONS_00037742 TCONS_00207792 TCONS_00098489 TCONS_00171864 TCONS_00039279 65 XLOC_124364 XLOC_111063 XLOC_084615 XLOC_009947 XLOC_080770 XLOC_104301 XLOC_084614 XLOC_009409 XLOC_090260 XLOC_115874 XLOC_066262 XLOC_133562 XLOC_034625 XLOC_012132 XLOC_026938 XLOC_028883 XLOC_124865 XLOC_136224 XLOC_138675 XLOC_103286 XLOC_071141 XLOC_034820 XLOC_072282 XLOC_035681 XLOC_000664 XLOC_056664 XLOC_052749 XLOC_106876 XLOC_053977 XLOC_041144 XLOC_155935 XLOC_070887 XLOC_091340 XLOC_131688 XLOC_078316 XLOC_014218 XLOC_125599 XLOC_095274 XLOC_032537 XLOC_085449 XLOC_143032 XLOC_133453 XLOC_120945 XLOC_112912 XLOC_118400 XLOC_133450 XLOC_014641 XLOC_153981 XLOC_102322 XLOC_153944 XLOC_112967 XLOC_041687 XLOC_056338 XLOC_021470 XLOC_142667 XLOC_149773 XLOC_073143 XLOC_021016 XLOC_021714 XLOC_056166 XLOC_021571 XLOC_126307 XLOC_058734 XLOC_103929 XLOC_023097 Coding TCONS_00196654 XLOC_118400 Coding Coding PNPLA3 5:114959864-115014122 = TSS146286 8151 1 TCONS_00196654_3 531 0.568151147098516 13 0.850010136940856 5.89876291415044e-05 3.15153418752854e-05 3.29130043297627e-05 2.59624223173378e-05 2.20213274024594e-05 1.4496162216887e-06 9.48251118053323e-05 5.15896206190356e-06 5.54760148107161e-05 0.000235938474950753 0.00019441326777349 8.9349876479414e-05 7.67343864975346e-06 3.61392880773479e-05 3.63228777626609e-05 0.00744770511677906 0.00251913245768283 0.00257607319979578 4.42586817272491e-06 1.86109887723752e-05 3.89347427037933e-06 0.00220176912508276 0.00197643567127696 0.00261654031494228 1.4581504266532e-05 3.01650521480806e-05 2.37076584200379e-05 0.000388194564081781 0.000566336010450564 0.00064585302379113 XM_002687974.3 PNPLA3 PREDICTED: Bos taurus patatin-like phospholipase domain containing 3 (PNPLA3), mRNA. 0.0 3041 100.00 0.206723101459944 XM_005261754.1 PNPLA3 PREDICTED: Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), transcript variant X1, mRNA. 0.0 686 73.55 0.133480554533186 TCONS_00196654_3 sp|Q9NST1|PLPL3_HUMAN PLPL3_HUMAN Patatin-like phospholipase domain-containing protein 3; 2e-148 439 57.81 0.704331450094162 1 coding 0 0 1 1 -0.0266304558446969 0.849327696487349 0.0012879508776763 0.980163879338 ATGGCTGGCACCAAGGTGGGCTTGGCTGAAGGCTGTGGGGACTGGAGCCAGCTAGGGTGGCAATTGGAGGTGGAGTCATCGCTTCACAAGCCAGACCCTCCTGTTGTGAACATCAGCCTGAGGGAAGTGGTCACCTCCAGCACGGACCTGTCCTCACGTTGCTGCTCCACCCTCTGCCTTGTCCCGGAGGAGCTTGCCCTGCCATGGGGCTGGCACCTGATGTTCCAGAGCAAGGCTGGGCCTGCGCTGGGCACTGGGGACAAGATGTCCCAGCTCTGGAGCCTCGCCTCCTGGATGACATTTGGGGCCCGTGGGAGCCCCTCCACGCCCGAACCTGGGAACAGCCACTTGCATTACATCGCTTCAGGCACCTGGCCCTTCGGGAGAGACATGCTGATCGACTTCAGCGGTATTCTGCTCCATCTCATTGCTGTCATCGTACTCAACAACTGCCTCCAGCATGACCAGACGTTGCAGATCCTCATGGACCTCACCCGGAGCGCCAGAAGCCAGAAATTCGGGATCGTCCACCCAGGCTTCAGTTTGAGCAAGCACATCCGAGACGGTCTCCAGAGACACCTCCCTGACAACGTCCACCAGCTTGTCTCGGGCAAGATGGTCATCTCGCTTACCAGAGTGTCGGACGGAAAAAACGTGCTGGTGTCGGATTTTCATTCCAAAGACGAAGTCGTGGACGCCTTGTGTTGTTCCTCCTACGTCCCTTTCATCTGTGGCTGGATCCCCCCTTCCTTCAGAGGCGTGCGATATGTGGATGGAGGAATAAGTGATAACATACCCTTTGTTGATACCAAAAGGACCATCACTGTGTCCCCCTTCTATGGGGAGAGCGACATCTGCCCCAAAGTCAAGTCCACGTTCTTTCTTAACGAAGGATTCACCAAGCTCAATATGCAGTTCTGCACAGAGAACCTCTACCTGATGTTCCAGTCGCTGTTCCCACCAGATGTCAAGGTGCTTGGAGAGCTATGCCTTCAAGGATATGTGGACGCGCTCAGGTTCTTGGAGAAGAATGGCATCCGTGATGGGCCCCATCCGTGCCTGAGCGCGCCCCCCGCAGAGTCGGAGCCCAGGAGCCTGGAGCCTTTTCTGGGTGTGGCCCCCAGGGAGGCGGGGCCCAAGCCAGTGGAGCTGCTGGACCACTTGCATCTCAGCATGCTGACCTGGGACGAGAGCGTCCTGGAGACCCAGTCGCCCGAGCTCAGCATGGCACTGAGGAAGGCAGTCAGAAACCCAGATGGGTACAGAAACAGGATTTGCAACTTCTTACCAGTTAAGATCATGTCCTACGTGATGCTGCCCTGTACGCTGCCCGTGGAGTCTGCCATCGCTGTGGTCCAGAGACTGGTGACGTGGCTTCCAGACATGCCCAGCGACATCCAGTGGCTGTGGTCGGCCACCTCCCACGTGTGTTCTCAAGCCATGGTGCGTCTGCTCCCCGCTTCCAGATCCCAAATCCCAGCAAGCAGCCAACGGCCTTCCTCCACAAACCCGGACACTGTGGGCGTCGCTGGGCTCTCTGCTCCTCCGAGGACCTGGACACGCACCCTGTGGATGTCCTGCAGAGGCCAGAGCTGACAACTATGATGTCCGCAGAATGACCTGTGTGCTGAGTTTGTAGTGTCCTGAAACCAAAGGCAATCTTTCTAACAAAAAGCTAGGAAGCTACTCTTGGTGTGCGCGGTGGGTGCAGAGCTCAAGCATATCCAGGATATGAGTCTCTAAATATCGTTGGCTCGGTTGGGAAACTGCACAAGGGAGCCCGGCGTGGGGGCATCTGTGGCTGACTCCTCACCCTCTCAGCTGCCCCAGGGCACGTTCCTAGGGTGACTGGTGTTTGGATCAGGGACGTTGTGGCGGGGAGCTGGGCTGCCCTTTGTGCAGTCACAGTGGTTGGGGGGAAGGACTGTGGTCCCATCTCTCCATAGAGAAAGCAGCCAGTGTCGGGGAGGTGGGGTGCCATCCTCCCAAGGACACCCCTGGTTTCAGGGGGCATTCCGAGGTGGTAACTTACGTGAACTCTGGTACATCTTTCTGCTGCTGCTACTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACTAGGCTCTTCTGTCCCTGGATTCTCCAGGCAAGAATACTGGAATGTGCCGGGGTCCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACAGCGTAGGCGAAGATCAGGAAACAACTGCTTAATTAAACGTTAATTAAGGATATAAGGAGTAATAGAATAAGGATAGTTCAGTAGGAAATTCAGTGAAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTGAGAGAAAGAACGACATGGGGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAATAGTTTTTATACCTTAAGTTATGGATAATGGGGGAAGGGGTGGAGTCATGCAAGGACAGCAGCTCCTGGTCCTAAATGAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAAAAACTTATTTTTCTCTAAAGGTGATTGGTCAGGAGCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGTCACAGGAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTGTAACTACTCAAAAGAATCTGTGTTTAGACAGTTTAGAACATCTCCTGCCTCTCACAGTTGGGAGGCTTTGAACAATCACATGTGGCCAGAAAAACCTATTCAGGCAGGCTAGAGGATTTCCAAAGGAGTTTGTAGCTTAAACACTGTCACACCCAGGAATTATTAACTGGAGCTGCAAGCCAACTCCTCTCCCAGAGAGGTAGTGGGGGACAGCCCCCCGCAAAGTCAGAGGTGCAGGTGAAGGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATGGGGGACTCCTGAGGCTCAATCCCGCCTTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCATGGGCGGAGTTCCTCACGCTGGCTCCTGGCAGTGATAGAATTCCAGTTGAGCTATTCCAGATCCTGAAAGATGATGCTGTGGAAAGTGCTGCACTCAATATGCAATATGCCGGCTCCCGGCAGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAATCAGTCGTGCCCGACTCTTAGCGACCTCATGGACTGCAGCCTACCAGGATCCTCTGTCCATGGGATTTTCCAGGCAATAGTACTTACCTATCCTAAATATTTGGTGGAGTTATATTAAACATAACTCTCAGCAGGCACTGAGAGAGAGCATCAGAGGGCAGACAGATGGAAACCACAATCACAGACAACAGGCCAATCTGATCAAACGGACCACCCAAGACGGACGGGTCATGGTGGAGAGGTCTGACGGAATGTGGACGACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCTTGAACAGCATGAAAAGCCAAAAAGATAGGACACTGAAAGATGAACCCCCCAGGTTGGTAGGTCGCTGATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAAATGAAGTGATGGGGCCAAAGCAAAAACACCACCCAGTTGTGGATGGGACTGGTGACAGAAGCAAGGTCCGATGCTGGAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAGGAGATGACAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTCAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATAGCTTGGTAATCCAAGCCTATGTCCCAACCAGTAACAGTGAAGAAGCTGAAGTCGAACAATTCTATGAAGACCTACAAGACCTTCTAGAACTAACACCCCAAAATGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGCCAAAAGCTAATAGAGTTCTGCTAAGAGAACACACTGGTCATAGCAAACACTCTCTTCCAACAACACAAGAGAAGATTCTACACATAGACATCACCAGATGGTCAACACTGAAATCAGATTGATTCTATTCTTTGAAGCCAAAGATGGAGAAGGTATATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTCAAGAAAGTGGAGAAAACCATTCAGATATGACCTAAATCAAATCCCTTATGACTATACAGTGGAAGTGAGAAATAGATTTAAGGGACTAGATGTGATAGAGTGCCTGATGAACTATGGACGCAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATACAAAAAAGCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAACTGAAGTGAAAAGCAGAGGAGAAAAGGAAAGATATAAGCATCTGAATGCAGAGTTCCAAAGAATAGCACAGAGAGATAAGAAAACCTTCCTCAGAGATCATGCAAAGAAATAGAGGAAAACGATAGAATGGGAAAGACGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAATCTTCATGACCCAGATAATCACGATGGTGTGATCACTGACCTATAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTACGAACAAAGCTAGTGGAGGTGATAGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACCCAATATGCCAGCAAATTTGGAACACTCAGCAGTGGCCACAGGACTGGAAAGGTTCAGTTTTCACTCCAATCCCAAAGAAGAGCAATGCAAAGAATGCTCAAGCAAACCACACAGTTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCATGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAATATTCACTGGATCATGGAAAAAGCAAGAGAATTCCAGAAAAACATCTATTTCTGCTTTCTTGACTACGCCAAAGCCATTGACTGTGTGGATCACAATCAACTGTGGAAAATTCTGGAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCCGTATGCAGTTCAGGAAGCAATAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTACTTATTTAACTTATATGCAGAATACATCATGAAAAACGCTGGGCTGGAGGAAGCACAAGGTGGAATCAAGATTGCCAGGAGAAATATCAATAACTTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGGTCCCATCACTTCATTGCAAATACATGGGGAAATAGTGACTGACTTTATTCTTCTGGGCTTCAAAATCACTGCAGAATGGTGACTGCAGCCACCATCTGAAATTAAAAGATGAAATTCAAAGGTGCATACTCCTCGGAAGGAAAGTTATAACCAACCTAGACAGGATATTATAAAGCACAGAGACATTACTTTGCCAACAGAGGTTCATCTAGTCAAGACTATGGTTTTTCCAGTGGTCATGTGTGGATGTGAGAGTTAGAATATAAAGAATGCTGAGCACAGAAGAATTGATGCTTTTGAACTGTCCTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATCTATCCAGTCCATCCTAAAGGAGATCAGTCCTGAATTTTCATTGTAAGGACTAATGTTGAAGCTGAAACTCCCAATACTTTGGCCACCTGATGTGAAGAGTTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAAAAGTGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTAATTGACAGAGGCCTACATGCTACAGTTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTTATATTAAACAAAGGATTCTTAAAATCTCTTGAATTATCTATTATGAGGATCAAGAAAACATTCAGAGAATAAGTCTTGAAAATAGAAATCCAGTGCATAAGACAGTCACCCTGGCACCTGCCCCCGCACCCCTCCCCCGCGAGCTCTAATGGAGACGAGCAGGAGGCAGGCACGCACCGTCTCTCCAGGGTGGTAATCTGTTGGCAGGCACAGATTACATGGGCCCACTGCCCGTGTAATATGACCCAAGGAGCAATGTGGCGTGCGTTTTGCTTATTTATGCATTTGAGGATACCAAAAAGGAAAGGAACAATCAGCTCAAATCCTACTTCTGGGCGTGCAAAGTCACAGCTCTCACCCACATCGTGTAGGTGTCCTGGAGCCGAAGAACCAGCAGGGCCAGACAGAGCACCGCACCGTGAGGGCAGCAGGCAGGGACTGCCTGTGAAAACACAGGGTCGGCTCGCAGTGCAGGGAAGTGCCCCATGGGGGCTCCTGGCTGGCTCCTCACATTTCTGGGGTCTCCTGTGCTGGTAACCCTCACTTCCCGAGTGAGGCAAGGCTGAGTGGTGGGCTCTCTGGCCACCTGGGCCCCAGGTCAAAGCACTGTCCCCTTGCTGAGCTGACCTGGACTCCTGGTGACACCCTCACACCTTCCCTGAGCCCGGTGCTCGGGGTCCCAGTGGCCTTCTCTGCCAGAACCATCGCCCGGGTCTTAACACATGCAACCCCACCTTAGCAGCATCTTACAGTAACCAAGACACTTTCATTTATATAGTATTCTCTGCACTGGTTCTGACGTCATCGTAGGGAAAAAGATGTGTTAAGATAGGATTACATGGGACTTATTTTCTTACTGTCTGTGATTATTCCATCTTCTTACGATCAGCATGTGTTTTATTAATTCGTTTCAAACGTGCAGTAACACGAGGAAGTGTATTACTGTTTCTTAGGAATATCCCGGGTTCCGCCTCACTGGTGCCTTGTCTCCTCATTGGCTGACCCAGGCCTCCCCCCGACATCCTCACCGCCCCCCAGGCCCTCACCTCTCCAGCACTGCGGGTTTCTCATCAGCGTGTAAAACATTCTCAAGTTTCTCCCACCTTGTCAAATATTGATGATCCGCTCGGTATGCGGGGATGCTCCAGTATCAGGAATCATTGGTGTGCAGTGTGATTCATGCCAGGGAGCAACCGTCTGTTTGGTAAACAGATAGCAGAGCCTGCTGAGAAGCATGAGCCCAGTCTTGCTAAGGAAATAAAATGTGTGTGTAGAGTGGACACTGAAAGACTGTTTGCCCGGTTACCGACGGTGGTTACCATGATGCCGTCCCCTGTAATTACATTTTATATTAAATTTCTGCGTTCATCACGATATAATTCATAACAA EMBV3_31065 GCAGTCAGACCCTTTGGCTCCTCAGTGAATAGTTTTGGGAAACTAGGATGTGATTTGGAC Gene GeneID:511412|MTPAP:XM_002692146:137_cdna UTR3_Alt 2 NULL GeneID:511412 13 GENE MTPAP PAPD1 mitochondrial poly(A) polymerase EMBV3_41779 GGGAGTGTCATCTATGTGTATTTTAGGCCACTGTCCATGTACTCAGTGGTGAAGGACCGG Gene GeneID:504570|LOC504570:XM_002691570:66_cdna Constitutive 0 NULL GeneID:504570 11 GENE LOC504570 NULL similar to olfactory receptor, family 1, subfamily L, member 6 EMBV3_15480 TTCCGGTACAAGCTCCTGATGGCCGGCGGGGACGCCAGCAAGGAGAGCAGCAAGGCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42307 GCCAGGGAGGGCAAATGTGCTTCTCCTTGTCCCACTCCTTTAGCTGCTACTGCCTCCTCT Variant GeneID:534750|VPS25:NM_001015657:166_cdna 784^902 2 EMBV3_05444 GeneID:534750 19 GENE VPS25 MGC10540 vacuolar protein sorting 25 homolog (S. cerevisiae) EMBV3_29238 ATGACGACAGAGAGTTTCGCATTAAGACAGCACTGGACATGCACGTGAGGCAGCAGATTC Gene GeneID:100297222|LOC100297222:XM_002707836:14_cdna Constitutive 0 NULL GeneID:100297222 8 GENE LOC100297222 NULL similar to ubiquinol-cytochrome c reductase binding protein EMBV3_00015 AAAGAACAAGGAAGTATGCAACAACCACAGGCAGATGAAGCCTATCTCATCGGCCCCGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42567 GTGGCACAGAAGTCCATAGCCTGCAACCCTTGAAATCGGGCATTGAGATGGCAGAAGTGA Gene GeneID:512677|PEX2:NM_001100348:22_cdna Constitutive 1 NULL GeneID:512677 14 GENE PEX2 PXMP3 peroxisomal biogenesis factor 2 EMBV3_01370 ACCTGCCCTACCACAGCAACTCGGAGAAGAAGAGGAAGAAGGAGACACCGGCGAAGAAGA Gene GeneID:522946|ILDR2:NM_001102073:26_cdna UTR3_Alt 2 NULL GeneID:522946 3 GENE ILDR2 C3H1ORF32 MGC148927 immunoglobulin-like domain containing receptor 2 EMBV3_18937 ACTCTGGAGCACTGTTCTGGGACTCAAGGTGATGGGAATGGAGAGAGGGAGACAAAGGAT Gene GeneID:539462|MPZ:NM_001079507:329_cdna Constitutive 0 NULL GeneID:539462 3 GENE MPZ NULL myelin protein zero EMBV3_23387 GAGTTCCTCATTCAGTATTACAGGCAGGAAGTTAGGGGAGAAGCACAGCTCCCGGATCGA Gene GeneID:783945|LOC783945:XM_002683686:2_cdna Constitutive 0 NULL GeneID:783945 9 GENE LOC783945 NULL similar to T-cell receptor beta chain V region CTL-F3 EMBV3_42010 GCACACTGCACCAGGAAAATGAGTTCCATGTCTTCCCAGTCAGTCTTCCATCTAGAGGTG Gene BVT0102_064460 + 0 NULL GK000005.2:64335073-64414614 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199838 1 XLOC_121490 NonCoding TCONS_00199838 XLOC_121490 NonCoding NonCoding - 5:64407846-64409215 - TSS149406 1369 1 TCONS_00199838_2 92 0.27027027027027 1 0 0 0 0 0.000151646514203776 0 0 0 0 0 0 0 0 0 0 0 6.02894433421311e-05 0.00048509107795981 9.16394276808262e-05 0 0 1.10873782525094e-06 0.000559215496159571 0 1.33591594607021e-05 0 0 2.13994449192614e-06 0 7.09219270689071e-06 1.097926555163e-05 NM_001080908.2 CA5B Bos taurus carbonic anhydrase VB, mitochondrial (CA5B), mRNA. 3e-78 297 90.65 0.155588020452885 0 noncoding 0 0 0 0 -0.072240616767349 0.557349716982225 -0.011886578011965 0.826453818088762 GATGCAATTAAGAAAGGTAACTAAGCAGTGGATTGTTAAAATACATATGTTGATCCAACTTGTGAGCCTGGGTATTTGGAAGTAAATGTGCTGACTCTGATCAAGTCACATGGTTAACAAAATCATTTAATTATACTTGATTTTAGCCAAAAGGCCGAGAAGAGGTATTAAAATCATTTTATTATAGATCCACATTGTGTCACTCTTTTCTCAGGTCAGCACCTCTAGATGGAAGACTGACTGGGAAGACATGGAACTCATTTTCCTGGTGCAGTGTGCAAGTTACTTGGGACTAGAATAATACAGGTAGTCTAGGTTTAAGATAGGAACTGGCAGGCTATTGCCAACTGCCTATTTTTGTAAAGTTTTACTGCAACATCGCCATATCCATTCCTTTTCATATTGTCTGCAGCTGTTTTCACTCTGCGATGGCAGAACTGAGTGGCTGTAACAGATACCACATTGTCCACAAGATACCATTTGGCCCTTAACAGAAAAAAAAAAAAAACAAACCTACCTGCTGACTCCTGGACTAATGAATATAGGGCTTAAATGAAATGAAGTAAATGGAAAAATGTACACTGAGGTTTAAAAAAATAAATTACAAATATAAAGGACAGGAGAGACCTGACTCAGCAATAACACACATGAACGAAAAAGTCCTAATGGTTACAAACCAGCACATATTTTGTATGGACAGGAAAAAGTCCTTAAAAACCAAGTAAATATACTCTTGTGCTGTGCTAAGTCACTTCAGTCATGTCCAACTCTTTGTGACCCTATCGACTATAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCGTGCCCTCCTCCAGGGAATCTTCCCAACCCAGCGACTGAACCCATGTCTTCTGTGTCTCCTGCACTGCAGGTGGATTCTTTACCCACTGAGCCACCTGGGAAGCCCCAAATGTACCTTCAGATTACCCTAAAAGAAACAGTATTTGGACCAGTAGTTGCAGTTCTTCTGGCATTAACCATGCTCCAATACCTACTCTTCTCTCCAACCTGTTCTCTGCCTAGAACCTTATCATTATGGTAATGAACACATCTTTCAGACTTTAGCTTAGATATCATCTCCTCTGCAAAGCCTTTGATTCCCCAACAGTAGGTTACATGTCCTTACCTATCATGGCATTTAACTCATCATATTAAAATTGAAATTTACTTGTCTAGCTCCCTGTGCAGGAGATTTAATCCATGTGGGCAAGGACAGGGAGCTGGTATCCTAATACCAGACTCAATACCTGCCATGTAATAGTTTTAAACATGTTTTGGGTTAATAAATCCCATTATAGTTCTCATCAGTCAGACCACATG TCONS_00195334 TCONS_00195335 TCONS_00195336 TCONS_00195337 TCONS_00195338 TCONS_00195339 TCONS_00195340 TCONS_00195341 TCONS_00195342 TCONS_00195343 TCONS_00195344 TCONS_00195345 TCONS_00195346 . 3' 4126 TCONS_00195334 TCONS_00195335 TCONS_00195336 TCONS_00195337 TCONS_00195338 TCONS_00195339 TCONS_00195340 TCONS_00195341 TCONS_00195342 TCONS_00195343 TCONS_00195344 TCONS_00195345 TCONS_00195346 . 3' 5494 EMBV3_08551 CACAGGGTCAACGGCGACAAGAAAGCATGCGGACATATGAGAGGGAAGCTCTGAGGAAAA Gene GeneID:407100|TJP3:NM_001045874:170_cdna Constitutive 0 NULL GeneID:407100 7 GENE TJP3 MGC137498 zo3 tight junction protein 3 (zona occludens 3) EMBV3_05548 CTGGAGGCTGATCTTTGCTGAAAAGTCCTTTAATCTGGGCTGGCACATCCCTCAGCCTTT Gene GeneID:784494|SEMA5B:XM_002684809:211_cdna Constitutive 0 NULL GeneID:784494 1 GENE SEMA5B NULL sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B EMBV3_39423 TCTTCCCATAGCCAATCCCTCCCATCCAGAAGGTTGCACAAGCCTCAACCTCATCCAGAA Gene BVV0102_104094 + 0 NULL GK000005.2:16809796-17207295 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03069 TTGAACCATCCTGCTCTCTTGGCAACCCCCCAAGAATCTGTGAGTCTCCGCAGAGCCCAG Gene GeneID:504530|PLEKHG2:XM_002695054:397_cdna Constitutive 0 NULL GeneID:504530 18 GENE PLEKHG2 NULL pleckstrin homology domain containing, family G (with RhoGef domain) member 2 EMBV3_18509 ATCTTCAGCCGCCTCATAGTTTCAGTAAAGTTAATTCCACGCATAAAAGACTTCATAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18930 CTCCGCACCGGCCAGCAAGATGTGGAGAAAGAGAAGGAAACCCACAATTACCTCAGCAAA Gene GeneID:536808|RASSF3:XM_002687652:836_cdna Constitutive 0 NULL GeneID:536808 5 GENE RASSF3 NULL Ras association (RalGDS/AF-6) domain family member 3 EMBV3_27229 AGAAGGAAGGGGTGCCTGGCGGGTACTTTTCTATCTTTTATTTCCAGATTTTTTTGTATC Gene GeneID:510973|NUMBL:NM_001076834:595_cdna Constitutive 2 NULL GeneID:510973 18 GENE NUMBL MGC142865 numb homolog (Drosophila)-like EMBV3_33374 GGCTGGCCTGTGAGGAGTTCAAGAAGCTCCGCCCGTGTTCCCTCTTTGTTGAGATCTTTG Gene GeneID:100296255|LOC100296255:XM_002698012:149_cdna Constitutive 0 NULL GeneID:100296255 25 GENE LOC100296255 NULL similar to regulator of G-protein signaling 5 EMBV3_35862 CTGACCTTTTGGGGACGCAGTTGTGCGTGTTTTACTTTTCTTTGACTCGTGCGTGAGTTC Gene GeneID:505336|EPN2:XM_002695822:188_cdna Constitutive 0 NULL GeneID:505336 19 GENE EPN2 NULL epsin 2 EMBV3_01694 CCTCGAGTAACACAGTTAGAAGGAAATGCGTGTGAAATTTTATGGGAGACGGTACCACCC Gene GeneID:615534|FNDC3B:XM_002684918:46_cdna UTR3_Alt 2 NULL GeneID:615534 1 GENE FNDC3B NULL fibronectin type III domain containing 3B EMBV3_10440 GATTCCACAGAGAGACTACAGACAAACGTTGCTAAGAAATCCCTGGACTCCTCCCGCAGT Gene GeneID:614006|MGC151957:NM_001076305:56_cdna Constitutive 1 NULL GeneID:614006 8 GENE MGC151957 NULL hypothetical protein LOC614006 EMBV3_37093 ACACCAGAGAACCATGCGGGACCAGGACACCGGGAAAGAGAATGAAATGGACTGGGATGA Gene GeneID:514447|CLSTN1:XM_002694061:173_cdna UTR3_Alt 3 NULL GeneID:514447 16 GENE CLSTN1 NULL calsyntenin 1 EMBV3_07707 TTACTGGCAGGAAAGGGGTACCAACTCAACCTGGAAAGAAGTCCCATGAACACAGTCTGT Gene GeneID:100335642|LOC100335642:XM_002683636:21_cdna Constitutive 0 NULL GeneID:100335642 7 GENE LOC100335642 NULL zinc finger protein 177-like EMBV3_19665 AAGCATAGAGTTGACCACTGGCCCGCCGGGGAAGTCCCTTGACTAGTTTCTGATAGTTGT Gene BVV0102_198648 + 0 NULL GK000017.2:64337046-64347876 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081443 1 XLOC_050322 NonCoding TCONS_00081443 XLOC_050322 NonCoding NonCoding - 17:64344231-64345044 - TSS61383 813 2 TCONS_00081443_1 63 0.747847478474785 1 0 0 0 0 0 0.00017611155372179 0 0 0 0 0 0 0 5.2938681674659e-06 0 0 0.00110454444901782 0 3.08621372292925e-05 0 0 3.11165154985075e-06 4.56376528050342e-05 0.00015797873879919 8.24827414852548e-05 0 0 0 0 0 0 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 8e-58 228 94.52 0.178351783517835 0 noncoding 0 0 0 0 0.0153874173507997 0.935111603515855 -0.0150499657234797 0.761280227468545 AGTCTATTTTTTTAAGTCTTTTTAAAAGCTTACTCAAGGGTAATTGTGGCTTGACCATGAGGACTGGTATGGTTCCCTTAATGAGAGTCAGCCAGTCAGCCATCCACAAATCGGGCATAGGAAGTAAGATGATGTGTCGGTTAAAGCAGTGTTTTTCCTTCTTTTTTTTTTTTAAAAGCAGTGTTTTTCAAAGCATAGTTATCACTCCAACTACTCTGTTTTTAGGTGATCTCTGTAGGCAGTACTAGATAACACAGTGAGAAAGCTGACTTCTAATATTTCCTTTATATTAAGGAGATACTCAATTTGGCATTTGCCTGTCACTTCTTTAATATTTGTTAATGTCCCCCCCCCCCATTTTTTTCAAACAGAGAAGCAACAGGTCTCAGATTGAGAGTTTCACAACTATCAGAAACTAGTCAAGGGACTTCCCCGGCGGGCCAGTGGTCAACTCTATGCTTGCACTGCAGGGGGCACAGGTTCAATTCCTGGTTAGGGAACTAAGATCCTACATGCCACTGGTTCAACAAAAAAAAATTTAAGACTTTAATAACATTGTTTTGTTTTCATTGTATGTACTTATTCTTATGGTTTGCTTTCTCAGGGCAAGTGACAGATTTTCCACTAACAGTAACAATAAAGATTTGTTGTTGTTTAGTCACTAAGTGCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTACCTGGAAAATCCCATGGACAGAGGAGCCTGGTAGGCTGCAGTCCACGGGATCGCTAAGAGTCAGACATGACTGAGCGACTTCCCTTTCACTTTTCACTTTCATGCATTG TCONS_00075874 . 5' 2833 TCONS_00075874 . 5' 2833 EMBV3_39563 CGGGATAACAAAATCACAAGCAATAATTAGGATCTATGCAATTTTTAAACTAGTAATGGG Gene GeneID:539487|NEUROD1:NM_001103288:38_cdna Constitutive 1 NULL GeneID:539487 2 GENE NEUROD1 MGC166032 neurogenic differentiation 1 EMBV3_04856 ACAGAAGAAACGGTAGCCACGCTCCCTCTTTGTCGTTCTCGTGACCTTGGTGGCATTCTA Gene BVT0101_018948 + 0 NULL GK000023.2:24627770-24637957 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134432 TCONS_00134429 TCONS_00134431 TCONS_00134427 TCONS_00134430 TCONS_00134428 1 XLOC_081403 Coding TCONS_00134430 XLOC_081403 Coding Coding TRAM2 23:24632426-24702918 j TSS100211 6915 1 TCONS_00134430_2 367 0.0205350686912509 11 0.902058418805238 0.00104747171007904 0.000355656861490698 0.00116417792495314 0.000336121337339422 0.000270400294964817 0.000240594920657883 0.000684205062764632 3.17543866050936e-08 5.75880374687709e-05 0.000273388361423099 9.20552168807602e-05 8.26468092946337e-05 0.000221886540955728 0.000397924108983037 1.32885643025022e-05 0.00184666721123971 8.90765548425084e-32 0.00169082205446374 0.000397730478621846 0 0 0.000780490004562124 0.000382457719070363 6.1662030437009e-06 0.00147534362346447 0.000337795836771525 1.96841866354968e-05 0.000336731776915971 0.000258820753806411 0.00018654197904159 NM_001193150.1 TRAM2 Bos taurus translocation associated membrane protein 2 (TRAM2), 0.0 2316 99.31 0.187274041937816 NM_012288.3 TRAM2 Homo sapiens translocation associated membrane protein 2 (TRAM2), 0.0 1873 76.93 0.347794649313088 TCONS_00134430_2 sp|Q15035|TRAM2_HUMAN TRAM2_HUMAN Translocating chain-associated membrane protein 2; 0.0 699 94.32 0.997275204359673 2 coding 0 1 1 1 1.64580301106904 0.358644159645558 -0.0260759070505967 0.595777734503027 GGGTGGAGCGGGGCCGGGGCTCGAGAAGTTTGCACGGCGGCTCTTGAGCGCCGGGTGCGGGCCCCGCCGGCCGTGCGCGCCCACTGCCATGGCTTTCCGCCGGCGGACGAAAAGTTACCCGCTCTTCAGCCAGGAGTTCGTCATCCACAACCATGCGGACATCGGCTTCTGCCTGGTGCTCTGCGTCCTTATCGGGCTTATGTTCGAGGTCACCGCCAAGACTGCCTTCCTATTTATCTTACCTCAGTACAATGTTAGCATGCCTACAGCAGACGGCGAGACGGTGCAGTACCACTATGGCCCGAAAGACCTGGTCACTGTCCTGTTCTACATCTTCATCGCCATCATCCTGCATGCCGTGGTGCAGGAGTACATACTAGACAAAATCAGCAAACGGCTTCATCTCTCCAAAGTCAAGCACAGCAAGTTCAACGAATCTGGGCAGCTGGTCGTCTTTCATCTCAGCTCGGTGATCTGGTGCTTCTACGTGGTGGTGACGGAAGGATACTTAACAAACCCGAGGAGCCTCTGGGAAGACTACCCACATGTGTACCTCCCCTTCCAGGTGAAGTTCTTCTACCTGTGCCAGCTTGCCTACTGGCTGCATGCACTTCCCGAGCTCTACTTCCAGAAGGAGGAGATCCCGCGGCAGCTCCAGTACATCTGCCTGTACTTGGTCCACATAGCAGGCGCATACCTCTTAAACCTGAGCCGCCTGGGCCTCGTCCTGCTCCTGCTGCAGTACTCGACCGAGTTCCTCTTCCACACGGCCCGGCTCTGCCACTTTGCGGACGAGAACAACGAGAAGCTGTTCAACGCCTGGGCGGCCGTATTTGGAGTCACCCGCCTCTTCATCCTCACCCTTGCCGTGCTGGCCATCGGCTTCGGCCTCGCTCGCATGGAAAACCAGGCCTTTGACCCTGAGAAAGGGAACTTCAACACATTACTCTGCAGGCTGTGCGTGCTGCTGCTGGTGTGTGCCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCGCAGCTGCGGCACTGGCGCGAGTATTGGAGCGAGCAGAGTGCCAAGCGCAGGGTGCCTGCTGCCCCCAGGCTAGCAGCCAGGCTCATCAAGAGGGAGTCGGGTTACCACGAAAATGGGGTGGTGAAAGCCGAGAATGGAACCTCCACACGGACTAAGAAACTGAAGTCTCCTTAAGGCCAAAGTGCTGAGAACAGCAATCCTCTCGTGGGGCCAGCAGGGAGCGCCCCCACCCGCCTTCCTGCTCCAGGCGCCCCGCCTCGAACAGCACAATCCCGTCTTCACACAGGGCCTTTTCCTCTTTCTTACGTCTCAGCTGTCTCCTCTTCTTCCTCCATGAACCGTTCTCAATAAAACCAAAAATCTCCCTCTTTCCCTTCCTCAGACCGCCGCACCTCCTCACCTCTGTCCTGGGTGGGGTTTGCTAGAAGCCCAGGCTCTCTCACGGTTCCTTTTCTGTCGGCCTCCTCTTTCTCTTCTTTCATGGCTTGTTTCTCTTTCTACTCGTTAGTGTACCTTATCGTGCAATTTCTCCGTGTCTGATTTTTTACAACGAGAGGAGGCTAAGCCTGCAGTGCTGGCCATCTAACACCCAGTCCCTGGGACTTGAGTGGGCCGCCCCGTGCCATGGAGCCTCCACCAAGCCGGCAGTGGCCCCTCGGTGATCTCTATGCGGATGGGCAGCAGGAGGAGAGACCGGCTCTCTCGGATCATCATCTCCTAGGTGCTGATGAACTGACGAGATGTATGATTCCAGTTCTGCACGTGCCATCTTGAGCACCACCCCGCCTCCCCCGTCCCGGGGGCCCTTTCTAGTCCTAAGTGCCAAGGCGTTTGGCTTTGGGACGTGACAACTCGTTCCAGAAGGATGGTGGTGACTGAATGGGGTCCCGTGGCTGGTCATGCATCGGCAGCCACCCCTGCTCTCTGTCGGGGACCTGCTAGAGGAGGACGAGTCATCCCACTCTACAGCAAGAGCAAAGTAACCGGCGCGGTGGGCACCTCCAGGGAGGTAATGCGGCAGAAATGACGGCATCGACCTGGCCTTCGGTAGCACGTCCAGCTGCACTGCGCTTCCCATCTTTCACCAGCAACCAAACCAAACAGCAGTTAACAAACCAGCCCAGCGGGGGACACGCCGGTTCTAAACCCAGCAGCCCTGCCTGTTGGGGGCTGGCCTTGCCCCTGACTTCATCTCTCTCGCTGCAGGAACACTAAGCTCCCCGGTGACCCCTGGTGCCCCAGCGAGGGTCACCTAGGCCCCTCACCTGCGAGCCTCACTTGCTGACTGTCCTATGGAGTTGTCGTTGTCTGCTGCTGTTTGCTGAGCACGCCCACAGCATTTTAGACGGTATAAACCCAGGCTGACTCAGAATCGCTTTGCTGGTTAGGAGGGCAGACCCAGCCTTGTTGACGGGAGTCTTTTTGCACCTTCCCCCCACGTGTTCCCCCCCAACCCCCCAAAGACAAGGCTTCCAGGCCTCACAGTGCCTTGTGAGGACTCCAGCAGGGAGCGAGGCTCTCAGGAGGAGACCTGAGTGCCTTGTGGAGCTGGTGGGAGCAGGCATGTTAGTGCCATTTGAGGGGCTGCTCTTCTCCCTGACACCAGAATAGAAAGTAAACCTTGAGTTATTACCCAGCATGGGGGAAATGGGTCTCTTCATCAAGGCAGCTTCCTTCTCCAGGTCACTTGCCCCAGAGAAAAGTTTTAATCTCCCAGTGCCTGGGATTTGCTTCCTGACAGCCTGGTAGACCCTCGCTTCTCTGCTCAGGATGAGGCCCTGGAGAGGGGAAGGGGTTCTCTTGATTACCATTAGGAGAGGGACAATGCTTGTGAAAACGCGAACTTCTCCTATCTTCTCCTTCCCTGACACTTACCTGGGCTGCAAGGGAGAATGTTGGTGAAAGGGTGGCTTGTACCAACTGAGCGGATCCAGTCTAGAACGCCCTCAGCCGTTCAAATAGTCCCCCTCCCCGCTCGTGGCTGTAGCCGAGTTTCTGCTCCTGCTTGCCTGGGGATGCTGTGTATGTAGCCCAGGTCAGCCTGCAGCCTCCTCAGCCTGCCCACTGGCCTCACGCCCGGCCCAGTCCTCTCTAGGTGTCCTTGGCCTTGGCACTGCTCCCCGGAGGCCACCCCCCATGCTGGGGAGCCCTGCAGCGTCATGCCTTCTCCCTGGGCCGGGGAGGAGGGAGCCGCAGCTGGGGCCCTGCCCAGAGCAGCGTCCCTTCTCGGGTACCAAGGTGATCACTGACAGAACACAGGTGTTTACCATGTGCCTCACGGTGGTACCACCAGCCTGGGCCCGGGCCGACTCGCACTGCATCCTAAACGATGGGGTCGGTTCCCTGATGAGAGTTGGGGAAATCTTCCCCACCATGTGAAGCCCCTGAGAACATTACGGGAGGCTAGTGTCCCACCCGCCAGCTTCAGGAGTGATTTGAGGGGAGGCTGAGAGGGTAACTGGGGGTGCCTGGCACATTCGCTTCAGAGCAGAGCCAAGCCTGTGGCAGGTTGGCTCACTGTGTGTGACCAGGGGCCGAAAAATCTCAGTTCCGCTTGGTCTTGAGAACTTGGGCTGCCTTGTCTTGGTTTGGCCATTCTGGATCTGTTCTTCAGTCTCACATCCTCGGTGATGGCCCGGCCAGACGCCCCCAAGTTTGAGAGGCTGCTTAGCACCATCTGCCAGGAGCCGAGCAGACACTTATCTACCTCAGCAGCCCCACCCCACCCCATCATCGCCGGCTGGCACACGTGGGGGCATCTGGTAGCATGGGAGAGGAGGCCCTGGGGTGGCGATCCTAACCCTCCCTGGAGGCTCTGTGATGGGAAGTTGTCGTCTCGCCCCGGGTTCTGATAACTGTGTATTATTCCTTGGTTATAGGTGCCCCTTCTGAAGGCAGGGCAGTTCTGGGGGACCCAGGAGCAGGCCAAGCTGGGCCTGGTCAGTCCTAGTCCTGCATGTGTCTCTGCAGACCTGCGTCCTTTCCCAACGAGTGCCTCTCCCATTTCTGTCCCAAGCGGAGCTACCACACTTCAGAAACCAGACTAGATCCCTGCCCTGGCCCCCTCTGCAGAGGGTGCTGTTGACTGGAAAGCCCTGGAGCCGGGCCGGGTGTTCCGGGATGCGCGCGGCTGGGTTTGCTTTGGGGACCTTTTTTCTTGTCACCTTTGACTTTCCTCGGTGCTGAGGAGAAGGTAGGGGCAGGGTGTGCACCCCCCTCCCGGGTTCAAGTTCAAAGTGGCTGCTCCTTGCAGCCTTTTGGTTTCTCTCCTGGGCTTCGGCCTCCCTGTCGGTCTGTCCTAGGCTGGGGGGCCAAGGGGGCGGGGAGGTCTGCATGTGACTCGCACCTGCAGGGGCCCCTGTGTCCCAGTGAACAGACCCCCTCTCCTGAGGGTCAGGGCCTGACCCCGTGGAGAGTGGCTTGGGAGTCAGGGCCGCCAAGTGGTCTCTCTCTCTCCACACTGCCATCTTAGCTTGCAGCCCTCTCCTCAGGAGGGCTTAGGCACGAATGCACAACTGGGCTGTTGACAGATCACTTGGGACCTAAGTCGAGTCTCCCCGGGTATGGCTGCCTCAGGAAGGAGCCTTCACCAACTTCTCTCTCTCTCAGTTCTTTCGTGAGTAGTAATTCCTTTCAGAAGGCTGTGAAAGACCACGGTTCCCCCAGCCGCCTCCCTTACCAGCTCGCTGTCTTTTATGGAGGTCCCCAGAAAGCATGGGGACGCTGGCTCTGCGAGACCTCTTTGTGCCCTGAGCTGATCCTGTATCTTTTTGTCAGAAGTGCCTTCCTTACTGGGGTCTCCTGGCCTCCACCTGCACCGTGTGGCCAGCCCCCGGCCCCAGTAGGGCTCCGTGGAAAAGGGACACGGACTGTGACGGTTTCCCCTCATTCGTCTTAGCCTCGCCCCTGCCCGTTGTCAGGACCTGGTGGTTTCCAGTTCCTCCTCGAGTCCAGGTGCTTGTGAGGGCCCCTCTGCGGGCAGCTGCCCATCAGGGAAGCTTGGGGCTCCCTGGGCACCAGGCCGCCATGCCTCTGGCTCATGCGCTGAACCCTGCTCATCCAGCTCCCCCGACGTGTAGAAGAAAAGGTATCCTCATAGCAGCCTCTTCTCATCTGTTCTGTTTCCCATTCGACCCAAAGTTTATGCAGGAAGGTGTTTACTCTTACTTCCGGTCACAAGTGTTACTCACAGATGCCCGTCTGACGTGGGTCCTGCTGGGCTGTGGCAGACGCCCCCTCCGTGCAGTGTTACCTTGTTGAGCATCAGCTCCCCCTCGCCCGCCCCTTCCCGCCACCTCCTCACTCTTCCGGGTTGTGCAATAACTCTCCCGGCCAGTGGTCTTTCCCACAGGCCGTCTGTCCCTCCCAGTGCTCGGCCACTGGGGCAGGACGGGACCCACGGGAGGGTGGTCGTCATCCCCACAGAAGAAACGGTAGCCACGCTCCCTCTTTGTCGTTCTCGTGACCTTGGTGGCATTCTAGTGGAACATTATAGCATCGTCTTAGAAGTCCCTGTATTTTTTAAACTGTTTAAAAAGGAAAAAAAAAAAAAAAACCATCCTCACGATGGGGCATTAATAGGTTAGCATCTGGGAATAAGTTCTGTGAGACACCTGAGGCATCACCAGCACTTCGCTGAAAGCATTTAAGAGTTTGTGTGGAGAGGAGGGAGGTTTTCCTGGGAATCAGCCGTGTGTGCACACCCCTGGTCACCCGATCGCATCTGACCAGTGGTAAGTGCCACCATCTCCTTGGGTACAGAGTCAAGTGTTTATGTGACGAGACTCTACACCTCATCGTTTTCAGTTTCTCTTGTTTAATAAACATCTGAAGGATGAGCTGAGGCTGCTGGTGCCCTGAGCAACTCATAATGCAGATGTGGACAAAGTATCTCTTCACTCTTCCACTTCAGCCTGTTCATGTTATGGACCAAATTTCCAACGAGGAACTCAAGGAAAATTTGTACCTGCCGTATTTATGCTTTCATGTAAAAGGGTTTTGTTTTTTTTGAGGGGGCTCTTTATACTTTCAGTGAACTTTTTTCCAAATCCTTTTCCCACTGTTTCTGTCCGATTTTAAAACAAATTACAGTTTTGTATGAATTTTTTAAAATGTACATTTTGAGACAAATGATCAAATATTTTTGAAATAACTGAATAAAAGGCATAGAATTATTAGTCTAATTGTCTCAGGTATAATTGCTTTTTACCTGGATGCTCACATTTGCTTTTTAAAGTTGCAGTTATTTTATTTCACCTCGAAGTCAGATGGTTATAAGGGAATTGTTTAGAGTGTTGCTTCAATGCATTTATAGAGTATGTTTCTTCCCCTGAAGATTGAAAAGGTTACAATTAAGATTGTTTGAAAATAGTGACATTGCTGGCAACTTTCTTTTTTGTAAGAACTTGCACCAACTGTAATCTTAAGTTTGTATTCGCAAGTGTGCTTTTATATGAAGAATGAGTTTGCGGCCATTTCAGCCTCATTTCTAATGTTTTTCACTGTTAGTAATTTCTTGCATATCTTTTGAGATAGTTGTTTATTGTGGTCATGTGAGTAAGGGAGCTGGACTTAAGGACAGAGAACAAGTCAGTTATTTTGAGTGGTGGGTAGCAGAACGCCTTTTACTTGTGTCTGTAACAGGAGGTGTAAATGTGGACAGGAGTGTGCCGACGTTGGGGGGGTGGTTAGGAAGCTCCAGGAGGAGGTGCACTGTGCCCAATGGCTACCTGTCATCCACAGGGGTGTGTTCTGAGACCCTCAGTGGATCCCTGAAACCCCAGACAGGACCAGGCCCTATACACACTGTGTTTTCCTAAACATACCTACCTACAGTGAAGTCTATAAATTAGGCACAGTAAGAGAGAACAATTACAAACATACACCATAATGAAAGC EMBV3_00869 AATGGAGTGCAGCCGTGAGGAGATGCGAACAGAAATGGAAGTTCTCAAACAGCAGGTGCA Gene GeneID:100298642|LOC100298642:XM_002694422:44_cdna Constitutive 0 NULL GeneID:100298642 17 GENE LOC100298642 NULL similar to TNFAIP3 interacting protein 1 EMBV3_09211 GAGAAACCAGTCGAGCCCGTTTTTGCCCAACGATGTCACCCTGTGGAACACCATGACGCT Gene GeneID:506833|DMRT3:XM_002689627:58_cdna Constitutive 0 NULL GeneID:506833 8 GENE DMRT3 NULL doublesex and mab-3 related transcription factor 3 EMBV3_29959 GCGGCCCGCCGGGGTGACGGAGCTCACTGCGGGGATGACAGTCTGTCTGCGATCACCTTT Variant GeneID:618833|IQCE:XM_002698166:644_cdna 138^270 4 EMBV3_41752 GeneID:618833 25 GENE IQCE NULL IQ motif containing E EMBV3_31360 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02609 CATCCTCACTTTTACGAGCTTGCGGCCTGTGATGAGCGAATTTGCCAATGGATTAGGCTG Gene GeneID:521189|SLC11A2:NM_001101103:80_cdna UTR3_Alt 2 NULL GeneID:521189 5 GENE SLC11A2 NULL solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 EMBV3_02773 AGGAAATGACTTTTAGTTCAGTGAATGACTTTGAACCAATTGGAATCTTCTCAAGCACAG Gene BVT0102_032954 + 0 NULL GK000002.2:85909952-85967997 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105657 TCONS_00105651 TCONS_00105654 TCONS_00105658 TCONS_00105653 TCONS_00105652 TCONS_00105655 TCONS_00105656 1 XLOC_062622 Coding TCONS_00105658 XLOC_062622 Coding Coding ANKRD44 2:85965043-86272432 j TSS77911 7295 1 TCONS_00105658_4 1031 28 0.976358868921363 0.000914382880708199 0.000939926789607007 0.0017938532187604 0.00104427629232247 0.00104231485198934 0.000267194486585557 0.00155116026155706 0.00133652033746722 0.000867441469585565 8.34524734842398e-05 2.80435118184198e-05 3.08516653233808e-06 0.00010022099160662 0.000375061404894627 7.75061373730856e-05 0.000425217268918199 8.60766160368749e-05 0.000795447483121811 0.00113513028050739 0.00081523673747658 0.000376463638998394 0.000814772712018868 3.72077764870216e-09 0.000839476420459667 0.00152144818313603 0.00119322575296801 0.000937149054133811 4.36091216568546e-05 2.48599387478728e-08 4.9202418279365e-57 XM_005202676.1 ANKRD44 PREDICTED: Bos taurus ankyrin repeat domain 44 (ANKRD44), 0.0 1.292e+04 99.96 0.982590815627142 XM_005246946.1 ANKRD44 PREDICTED: Homo sapiens ankyrin repeat domain 44 (ANKRD44), 0.0 8478 86.14 0.981220013708019 TCONS_00105658_4 sp|Q8N8A2|ANR44_HUMAN ANR44_HUMAN Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B; 0.0 1890 97.15 0.919495635305529 5 coding 1 1 1 0 0.0728933054804368 0.659874635813058 0.000261978715632993 0.997223693072461 ACCTGGTCGGTGAGTTTGAGCACTGCCATTCTTCCGCTCCTTCGCGCGCACACACATACAGGTCCCCGCAATCTTCAGCGGTGATCCAGAGGAGATACGGATGCTCATCCACAAAACAGAAGATGTGAATGCTCTGGATTCTGAGAAGCGAACCCCACTTCATGTGGCTGCGTTTCTGGGAGATGCAGAGATAATTGAACTCCTGATTCTGTCAGGAGCTCGTGTGAATGCCAAGGACAACATGTGGCTGACCCCGTTGCACCGGGCTGTTGCCTCCAGAAGTGAAGAAGCAGTACAAGTATTGATTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTGGCAGACCCCCCTCCACGTGGCAGCAGCCAATAAGGCTGTTAAGTGTGCAGAAGTCATCATTCCCCTGCTGAGCAGCGTCAATGTCTCTGACCGAGGGGGTCGCACAGCCTTGCACCATGCTGCTCTGAATGGCCATGTGGAGATGGTCAATTTACTGTTGGCTAAAGGGGCAAACATCAATGCGTTTGACAAGAAGGATCGACGTGCTCTGCACTGGGCAGCTTATATGGGCCACCTGGACGTCGTGGCGTTGCTCGTTAACCATGGTGCAGAAGTGACGTGTAAGGATAAGAAGGGCTATACGCCCCTGCACGCCGCAGCCTCCAACGGACAGATCAATGTTGTCAAGCATCTTCTGAATCTGGGGGTGGAGATCGATGAAATCAACGTGTATGGAAACACAGCTCTCCACTTGGCCTGCTACAATGGGCAGGATGCTGTAGTCAACGAGCTGACCGACTACGGTGCTAATGTGAACCAGCCCAACAACAGCGGGTTCACCCCGTTGCATTTTGCTGCTGCCTCCACACACGGTGCTCTGTGTCTTGAACTATTAGTAAACAACGGGGCGGATGTTAACATCCAGAGTAAAGATGGTAAAAGTCCGCTGCACATGACAGCTGTCCACGGAAGGTTCACACGGTCACAAACCCTCATTCAGAATGGAGGTGAAATTGACTGTGTGGATAAGGATGGGAACACTCCTCTTCATGTGGCTGCAAGATACGGTCATGAGCTTTTGATTAACACCTTAATAACCAGTGGAGCTGACACAGCCAAGTGTGGAATCCATAGCATGTTCCCCTTACATTTAGCTGCCCTCAATGCTCACTCTGACTGCTGCAGAAAGTTACTGTCATCGGGCTTTGAAATAGACACCCCAGATAAATTTGGAAGAACGTGCCTTCATGCTGCTGCTGCAGGAGGTAATGTGGAATGTATAAAACTCTTGCAAAGCAGTGGAGCAGATTTCCATAAAAAGGACAAGTGTGGGAGGACTCCTCTGCACTATGCAGCTGCAAATTGTCATTTCCACTGTATTGAGACATTAGTGACCACAGGGGCCAGTGTGAATGAGACTGATGACTGGGGCCGCACCGCTTTGCACTATGCTGCTGCATCAGACATGGATAGAAATAAGATTATCTTAGGAAACGCCCATGAAAATTCGGAAGAACTTGAAAGAGCCAGAGAGCTGAAGGAAAAGGAAGCTGCATTATGTCTAGAATTTCTGCTTCAACATGATGCAAATCCATCTATCCGGGACAAGGAAGGCTATAATAGCATACATTATGCTGCTGCCTATGGCCACAGACAGTGTCTGGAATTGCTTTTGGAAAGAACCAACAGTGTTTTTGAAGAGTCAGATTCCGGTGCTACCAAGAGTCCACTCCATTTAGCTGCGTACAATGGGCACCACCAGGCCTTGGAAGTCCTTCTGCAGTCGCTGGTAGACCTGGACATCAGGGATGAGAAAGGCCGCACTGCTCTGGATCTAGCTGCCTTTAAGGGACATACGGAATGTGTGGAAGCACTTATCAATCAAGGTGCATCCATCTTTGTGAAAGACAATGTAACCAAAAGAACCCCACTTCATGCCTCAGTAATTAATGGTCACACGCTGTGTATGCGGCTATTACTAGAAATTGCAGACAACCCAGAAGTTGTTGACGTGAAAGATGCCAAAGGACAAACCCCACTAATGCTTGCAGTAGCGTATGGACACAGTGATGCTGTTTCATTGTTACTTGAAAAGGAAGCAAATGTAGATGCTGTCGACATCATGGGCTGCACAGCTTTACACAGAGGGATTATGACGGGACATGAGGAATGTGTGCAAATGCTGCTGGAACAAGAAGTGTCGATTCTGTGTAAAGATTCCAGAGGGAGGACACCCTTGCACTATGCAGCTGCTCGTGGCCATGCCACGTGGCTGAGTGAGCTGCTCCAGATGGCACTTTCCGAGGAGGACTGTTCTTTCAAAGACAACCAAGGCTACACGCCACTGCACTGGGCTTGTTACAATGGTAATGAAAACTGTATAGAGGTACTTTTGGAGCAGAAATGCTTTCGAACATTTATCGGTAATCCTTTCACTCCACTGCACTGTGCAATAATAAATGATCATGAGAATTGTGCATCATTGTTACTCGGGGCCATAGATTCCAGTATTGTCAATTGTAGAGATGACAAAGGCAGGACACCACTTCATGCAGCAGCATTTGCTGATCACGTGGAGTGCTTGCAGCTTCTTCTGAGACACAACGCTCAAGTGAACGCGGCAGACAATTCAGGGAAAACACCACTGATGATGGCTGCTGAGAACGGGCAGGCTGGTGCCGTGGATATTTTGGTGAACAGTGCCCAGGCTGACCTGACTGTGAAGGATAAGGACTTGAACACATCCTTACATTTGGCTAGTAGTAAAGGTCATGAAAAATGTGCCTTGTTAATACTTGACAAGATACAAGATGAGAGCCTTATTAATGCAAAAAACAATGCACTGCAGACACCCCTCCATGTGGCCGCACGCAATGGCTTGAAAGTGGTCGTTGAGGAGCTGCTGGCCAAAGGGGCTTGTGTACTTGCTGTAGATGAAAATGGTCATACCCCGGCCCTGGCTTGTGCTCCTAACAAAGACGTGGCTGACTGCCTGGCCCTCATTCTGGCTACCATGATGACTTTTTCTCCTTCCAGTACAATGACGGCTGTCAACTTCGTTTGTTTTAAAAAAGACAGTTTGAGCAGGACGACCCTCTCCAACCTGGGTAGCATGGTTAGCCTGTGCAGTAACAATGTAGGCTCTGAGGATGGGTACAATGAGAATGATTCTGATTCGGAAACTTTCTGATTTTGGACTGTAGAAGCTTTTCCTTGATCACCCATGTTGGAGGAAGGGAACAAAGCTTGAATTCCAGATGTATGTTGTGTTCAAGTATTATTATGGGCCGAGCTTCCAGAAGCCAGTAGAGAAGAAATTAATCAAGCCCAGGGAAAGCAGCTAGGCTGTAGGGCAAAGCTCTCACACAGTTGGGCCTTGGTTTTACTTTGTTTCATGTTTTCCTTAGAGCTGAGATACTTCTGTGAAAGTCTACCTCTCATTTTAAATATGGAATTTAAAAAAAAAACATTTAATTATTTTTCTTTGGGGATAATGCAACAAAGAGGGAGATTTTTTTTTTTTTTTCTTTTTTTCATGTACTCACTCAGCAGTGAGTTCTCAAAAGTGTATCGATGTGACATTCATGTCCCCAAGGAAGGGAGGGAAGGGCTGGATAGGAGATGCCTCAAACCTCTGCTCAATTTGATGTTTACTTCCTTACTAGAAGCCAAAGGTAGAGGTGTTCATCTTCAGAAATAATGCCTGTAATAATCTTTTTTAAGGGAGTCCAATTATTCATAGGCTTCCCAGGTGGCACTAGTGATATCCTCTCTATAGTGTACTGAAATATCCAGAACTTCTTTTTGAGGATTTTTAAGTTGCCAAATGAAGGGGGAAATCCACTGAAAATTGAACTTGCTCTTTTCATTTAACAAAAATATGGCACCCAGTGCTCCCTGTAAAAAGCCTGTGACTAATTTTCACCAAATGATTGAACCAGAATCACTTCAATAACATTTCAGGTGAAAATTATATTGCACCGAAACTTTTGAGATATATGCAAATATGAAACTACCCTTTATTAATTTGTCTGTAAATCAAAATACTAACTTTATTAAAAACATAACAGCCATCAGTATTGTTCATCAGTAGTGAAATGTTATATGAGCTTTTCGGTCAAAGTCATGCTCAGTGAGTGGAAGTGTGACTCCAAAAAAGAATGAAGTGAAAGCACGATGTAAAAATGGGTGAAATGGAAATTAAAGCCGATTAAAGTTGCTTCCTGATGAAATCATCGTAGTGAACACTGTGTCTGCTCCCTCTCCTCTGCCAAAGCTTCTAGGTCAAATGGACCCCGCTCCGCACCTGGAATAGCTGTACAAAAAGAAGAATGAGACTTTAAATTACACACGTACACATGCACATGTATATGTATGTATTTATCTGTGTCTGTAGTTCATCAGCCAGCTATACACGAGGACCAAAATGCTTCAGTCTAAAATTGAAGATTTAAATTGTTTTCCTTCAAAATGGAAGTAAGAACTGAAATAGCTTTTCTATGGAGTTAAAATGTAATCTTTTTGCGTAAGTCTTTATTGTATTTTATATTTCTTATGACACAGATTTCTAGCTGATGGCTTAACATTTGTAACTAATAATGTGTTTACCACAGCTTAATTTTTTGCCAAACTAGAGAAAATGTTCATATACTTTGATGTATATGTGTTTGTATTTATTTGAAATGAAACAAATGCCGAGGAAATATCCATTGTTTATTCTCTTTTAATTCTTACTTGGAATAACGAGGAAGCCGGAAAATATACAGAACTTTTCCTGGGCTGGCCTGCATTCCTGAGGGCAAGCCCAGAAATTCCACTGCTAAGGTTTCCAGCCGACCCTCAGGTTCTTCCACATCGGTTGAAAAAAGGTACAACATCCATGACTCAGCCTGTGTGTAGCCAGCTCAGAGCTTAGAATACACTGCAGTCCTTATGCTTTTCTTCGAGATGAAAACTGAAGTGGGTAGTGGGTCATGTGCACAAAGAGGGCCCAAAGAAAGATACGGAAATTATCCTGAATGTGCTGAAAATCTCATGGTCCCAGCAGCCTAATGGGAAACTCTGTCAGTGTGTGGGCACATGTACCAAGAAGAGAAATACAAATCACCAGCTCATGCTATTTTCTACTTGAGGAAGAGACAGGACAGAAATATGTTGCATTAGAGTACTGCTCTCCAATATTTTATAATGGGTTCCATTTTCACTCTGGAAATTTCTATCTTAATGTATGTGAGATATTTTTTAAACAGTGTCCTAACATACCTAGATCAAATACAGATACCATACTATGTATTTCATCTAACTGTAAAAGTCTTCACTCTGTAATATTCTGGATTTTATTAAAAATTCATGTTGGGTTCTTCACAAATGAGAACTTGTTCAAAGGACTTATAAGAACTGGTATTAGTTTCATTGAAACCTTTTGTTTCACCACTGCCATTGTTTTTTTTTAATTCTTGGTGTTGTGTTCCTTTCTTTTCTCTGTCCTTTTTGTCTGCTTGGAGATGAGTTTTGAAAAAGTGGATAAATTGTTAATGAGCAATAATGACCTTACCTTTACCAAAACCCTGAAAGTAAGGGAGCTCTAACACTGCAGAAACGTGATATATTGTGGAGTCTTTTTCCAGAAGTGAATGGAAATCTTGCTCAGTTGGCCTTTAAAGCAGGAAACGCGATGCCTGATTTAATGGTGAAGCAGCGTTACCATTTCTCCTATAGAGTAGCACAGAGAACAAGAAATATTACGGCAAGGCAGTGACAGCTCTGCGACATTATCTCTGGAGCTGCGTTCTGACTTTTCCCCAGTCTCACTGCCAGAAAGGAGGAGGACAAAAGAACAAAATAAAATCATGCCGTGAATTGCTTATTGAATCTCTCTCCCCCACTCTCTTTCTCTTTCTCCCTCTTCCCAAGACCAATTTTTTTCCCTTAAGGAACGACTTTAAAAACTGAGTTCTGTGTTTTTCACTCACATCTCTTAGAAAACTAGATTTGCCACATAGCTTTCTAAGAAAAACAAAAACAGAAAACATTGTGCTTTTAATTGAGTCTTGGTTGTTTTGTGCTTTTACCTAAATATGTTATTTTTAGACTGTATTTTAACCACAGCCACAGGGATCATGTTTCATTGCACTTACCTATTTGCCATGTCTGCCTATCCTTGGTAAATACATTACTATCTCCAAATTGCCTAAAATCTGCTATGATTCTACAGTAAATAGCTCAGGGGATTTCTATTTATCACTAATAAAAGGGCACCATAGTATGTTTTGGTACTTTAGGCAGTAAACAGCTGCTGGGTTTATTATTTTATTATTAAATTAGGACAAGAACATCAAATGGATTTGCTGCACTAGTAATCTTTGTACTGTTGAGCAACTTGGTTTGCTTATCTGTTGTGTTGGTTGAAGAACCCATCCCTTTTTTTTTGTCGTGTGATATGAAGTTAGAGTGCCTTTTTATATTTGTATATTCTGAAAATATTCTGTGAAATGTTTTGTATTTTTTTTCATTTGAGTGTTATCAGAGCAATATAATACCAGTGAGTTTTCATTTCAGCCTTTCTTTGAATGTATAAAGTGTCTTTTTTCCTCTTTCCCCTTTTACCTGCTTTGAAATGAAAATGAAGATGCTGAAGTTTTCTATAGGAATTATGTTTGATTTTGCAGTGCTAAAATGCTTTCTTTTTACAAAACCATAAACCATAGGTCAGTGTTATAGGGGAAGAGCATTTTAAGATAGTGACAATCTGAGTGTGTGTATAAAATGTAATTCTATGCGTTTCTTATGCAGTGACCTAAAAATTCAATGCAAATATCTTTTGTTTGGTAGTTTTGTCTATATATTTTATGCTTTAGCATGTGCAATATATCTTTGCAAAACGTGATGATACAAATCTGGTGCCAGTGTTATATTTTGCATAACATATTTGTAACAGCATAAAATATTGTTTGATGATTTCAGTGGGATTTTGTCTGTAATGTTTTCTTATGAAAATTGGAGTTGAATGACTCTGGTAAATGCCATGACTATAAAAATGAGGAAATGACTTTTAGTTCAGTGAATGACTTTGAACCAATTGGAATCTTCTCAAGCACAGTTTAATACTTTTTCAACTACTGAATGCTAATCATGTCATGAAGTACTTAACTGTAATATACTATGGAAATGCATTCAGATGGTTATTTTTCCAAATAAAAGCGGTACAAATATTGTTGCAATTTGTGTTGTCTTTAAATTTTCCAGTTATGCTAATTTTGCCAATTATTATGCTAACTTAAACTTTTATC EMBV3_28879 CTCCGATCGTCAAGGAGACCACCGGGAGGGCCTTCTCTGCGTGGGCTTTTGCAAAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36227 CCATAGTAGCTGTTCAGGCGATTATTGCTGACCCAAAGACAGACCACAGACTGGGAAAAG Gene GeneID:513083|C10H14ORF166:NM_001035280:52_cdna Constitutive 2 NULL GeneID:513083 10 GENE C10H14ORF166 MGC127223 chromosome 14 open reading frame 166 ortholog EMBV3_09734 CCTAAGTTTGAAGATTGGCTTTGTAACAAGACTCTGAACAGGAAGTGCCCCCTGGAACCA Variant GeneID:534216|RBM5:NM_001046374:235_cdna 718^778 2 EMBV3_00278 GeneID:534216 22 GENE RBM5 LUCA15 MGC137881 RNA binding motif protein 5 EMBV3_04013 GTGGCGATTTCTGGAACACTTGGAAGTGGAGTTGGGCTCCTTTTGAAGTTACCTAAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17761 GCTATAATGGGTATGGAGGAGGACCTGGAGGAAATTACGGGAGTGGAAATTACAATGATT Variant GeneID:507564|HNRNPA2B1:NM_001045975:121_cdna 855^974 1 EMBV3_32815 GeneID:507564 4 GENE HNRNPA2B1 HNRPA2B1 MGC138128 heterogeneous nuclear ribonucleoprotein A2/B1 EMBV3_41124 TGATCACATAAATTTTGAAATGAATTATGTTGTTTGTTCTAATAAGGTTTCAAAAACCTT Gene GeneID:513869|LOC513869:XM_002687794:11_cdna Constitutive 0 NULL GeneID:513869 5 GENE LOC513869 NULL similar to NKG2A EMBV3_37319 GGTACCGGGAAGAGGGGTGTCATGAGTCAGGCTCCATGCAGAAAGTAGAAACAGTTCAAA Gene BVT0102_027731 + 0 NULL GK000018.2:10706276-10781069 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085406 TCONS_00085407 TCONS_00085409 TCONS_00085408 1 XLOC_051862 NonCoding TCONS_00085409 XLOC_051862 NonCoding NonCoding - 18:10767395-10776443 - TSS63790 2302 2 TCONS_00085409_3 163 0.50868809730669 2 0.745772079142257 0.00219918744310275 0.00191078289408883 0.000722568371734242 0.000879191347773308 0.00111233855408787 0.000112328318795025 0.000815658822987556 0.000580910634134375 0.000743767013633109 1.78513312842225e-06 1.39208689828506e-05 3.93510262895198e-12 7.87442997354715e-05 1.56963228517286e-92 2.82362249828466e-06 0.000172085519206425 0 0 0.000686607709595696 0.00264872579915927 0.000542716306061999 0 0 0 0.00285840040272324 0.00178827911011397 0.000400995521899598 0 0 0 XR_231886.1 LOC101908184 PREDICTED: Bos taurus uncharacterized LOC101908184 (LOC101908184), 3e-113 414 95.37 0.112076455256299 0 noncoding 0 0 1 1 0.0859313235206963 0.491566751381116 -0.0284269125708324 0.582621591050593 CAGAGGATGAGATGGCTGGATGGTATCAACCGACTCGATGGACATGAGTTTGAATAGGATCTGGGAGTTGGTGATGGACTGGAAAGCCTGGCGTGCCTCAGTCCATGGGGTCACAAAGAGTCAGACATGATTGAGCGACTGAACTGAGCTGTAATTAGTTAAGGATCTCCAGGTGAACCATCATGGATTTAGGGTGGGCCTTGAAGCGGAGGCCAGGTGTCCCTTATGAGAGAAAGCAGAGGGAGGCCGTGAGAGGATGGAGGCAGAGACTAGAGGGAGACAGTCACAGGCCGAGGACGCCTGGAGCGGCGGGAGCTGGAAGGGGCAGGAAGGACTCATCCCAGAGCTGCTAACATCTGGAGGGAGCCTGGTCCTGCTGACACCTCCATTTCAGACTTCCGGCCTCCCGATGCTGAGTAATAGTCCATTGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTTGGAGGGACTGGCAGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGATTCGATGGACATGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCAAGGGGTTGCAAAGAGTCGGACACGACTGAGCAACTGTTCTGAACTGAATAGTCCATTGTATATAAGTACCACTATTTCTGTATCCATTCATCTGTCGATGGGCATGTAGGTTACTTCCATGTCCTAGCTATTGTAAAAAGTGCTGCAATGAACATTGGGGTACATGCGTCTCTTTCAGTTATGGTTTTCTCAGGGTATGTACCCAGAAGTGGGATTATTGGGTCATATGGTAATTCTATTCCTAGTTTTTTTGTTTGTTTGATTTTTAAGGAATCTCTATACTGTTCTCCATAGTGGCTGTAACAATTTTCATTCCCATCAACAGTGCAAGAGGGTTCCCTTTTCTCCACACCCTCTCCAGCCCTGTGTGAGCTTAGCTGAAGTTAATCTGTGCAGCCACACTGAGAACAGAGAAACCTGATCCTTATTTCTTCGTTTAAGGACCACAGGGTTCATCCAAGAAATGACTAGAGGCCATGTCAGGGCTCTCCTCGCTGCCTTGCAAGTGCGTGGTTGGTTCCTGGAGCTGGACTCTGCCCTGTCTCCCAGGGCCCCACCGGGATCCTTGCCCTCCGGTGCTGTAGTTTCCCTCTTGGGTAATGACCCTGGGTACTTGGGGTTCATTCTAACTTTTTTGGAAAAGCTAAAAATGAATTTCCCAAGCTCTCTTGGAGCTCCGGCTCTGGGTGTGAGTTTGGCTGTGCCAGTTCAACGTGTTCTCATGAGATTTGGAAGATGGGAAGAAGGCGGGTGCTGTCTCTCTGTGGCCTGTTTTCCCTTGACCAGCAAGGTCATGGGGATGCTGGCGTCCAGCCTCCAGCTCCGGGGGTGTCTAGCCGCAGGCGCTCACTCCTGGGCTGCAGCGCTGAAGGTGCTCTGACTCAACAGTCCCCTCACAGCTTTGTGCTTCTCAGCTCTCCTGAGTGCGGCAGCTCCTGTTCTGCCGTGTCGAGGGGTCACGGCCGCAGTGGAGCCTGGGGCTGCTCCTCCAGCCCGCTGTCGGCTTTGTAATCACCCAGTGTGTTGTGTGAAGCTGTTTTCTGCCGGAAAGACTTTGAACTGTTTCTACTTTCTGCATGGAGCCTGACTCATGACACCCCTCTTCCCGGTACCCCAATCCTGCTGACTGCCTGGCCTGTGTGGCTGCCCTGCCCTTCCATCAGCAGCTGGCTCTGACTCTAAGCCTGACTCAGATCTCATGGGCTGCTGCTTACCTCCAGTGTAGACAACCCACTTCAAACTCCGACCTGCCTGCCCTGAGGCATTTGCTCCCGTCCCCCAGCGTTGTACAGGGGTGTGGTTCTGAATTCTCCCTACTCTGATTGCTGGGAGTGCTCCCTTAGTAATGAGTAACTTCAAGAGTCACTAAGGAGTATTTCAAAATGAGAAATAATGAGAAAATGAGTCTGGCTTGAAAATTACTCCCAATATGGTCATATCATAAAAGCCTGGGGGGCAGGGGGAGACACGGACCCGTTTTCCTTTCCGTGCCTTAAAACACAATGATTCAACTGGTGACTAAATTGTGAGCTTTTTCTTATTCATGTGTTAATCTCTCTAAGCTACAAAAATAATAGATACTCACTGCAGCTAATTCTGAATAATACGCAACTGTATGAAATAAAGTTTAGAGACCAAACTATAAATGGTGAGCCCCTCAACC TCONS_00085404 s 5' 10720 TCONS_00085411 s 3' 4627 EMBV3_06167 CACGCTCGCCGCCTCTGCCAGCACGACAGATTCATCCATGAGCTCGGATTTCCCACATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26175 CATCTTCTACTTGGCAGCCCTCTTCATCTACTGCCGCCCCAGCCGCATCAGATCCATGGA Gene GeneID:617592|LOC617592:XM_002695477:198_cdna Constitutive 0 NULL GeneID:617592 18 GENE LOC617592 NULL similar to olfactory receptor 1348 EMBV3_17070 AAGCTCTTCATTTGGGGGTAGGGAAGAAAGACTGTTTGAACCACGCCAATGACGTTTTCG Gene GeneID:407183|PFKFB3:NM_001077837:10_cdna Constitutive 0 NULL GeneID:407183 13 GENE PFKFB3 NULL 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 EMBV3_26611 ATGGGAATTTGCAGTGTGACACAGGGAGTTCAAATCAGTGCTCTGTGACAACCTAGAGGG Gene BVV0102_261621 + 0 NULL GK000001.2:128715505-128830907 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010987 1 XLOC_006538 NonCoding TCONS_00010987 XLOC_006538 NonCoding NonCoding - 1:128820465-128820868 - TSS8064 403 0.823821339950372 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000402806106892582 NM_205773.2 CCL11 Bos taurus chemokine (C-C motif) ligand 11 (CCL11), mRNA. 1e-44 183 81.41 0.483870967741935 0 noncoding 0 0 0 0 -0.0799929715431041 0.563665281293636 0.0346060982864093 0.659876183053629 CCTAATTTTTATATCTTTACAGTGAAGTTCAATATCTGATAGTATAAGTCCCCCCACTCTTCTTTTCCTTTTTTTGATTTTTTTTAATTGGAGGATAATTGCTTTAAAACACTGTGTTGGTTTCTGTCATACATCAATATGAATAAGCCACAGGTATACCTACATCCCCTCCCTCCTGAAACCCCTCTCATCTCCCTCTCCATCCCAGCCCTCTAGGTTGTCACAGAGCACTGATTTGAACTCCCTGTGTCACACTGCAAATTCCCATTTGCTATCTATTTTAAGAAGATATACAGATAGCCAACAAACACATAAAAACATGCTCAGTTCAGTTCCATACAGTCACTCTGTTGTGTCCAACTCTTTGTGACACACCAGGCTTCCCTGTCCATCACCAACTCCT TCONS_00005204 . 3' 10040 TCONS_00005204 . 3' 10442 EMBV3_01745 TGAGGTCACCCAGAGTCCCAGTCATCTGGTCAAAGGAAAAGGCCAGAAAGCAAAGATGGA Gene GeneID:100336503|LOC100336503:XM_002683671:2_cdna Constitutive 0 NULL GeneID:100336503 8 GENE LOC100336503 NULL hypothetical protein LOC100336503 EMBV3_36443 AGATTAGAATCTTACCAATGGCTGGTCGTGATCCTGAGTGCCAGCGCACAGAGATGATCA Gene GeneID:507524|LEO1:NM_001082604:41_cdna Constitutive 0 NULL GeneID:507524 10 GENE LEO1 NULL Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) EMBV3_02735 GATCCCAGAAGGGGAAGGAGGCTTTCCTGGGGTGGTTTTGGGTATCTCGACCCTGTGAGA Gene BVT0102_092149 + 0 NULL GK000002.2:24491348-24502907 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108278 1 XLOC_064186 NonCoding TCONS_00108278 XLOC_064186 NonCoding NonCoding - 2:24496164-24496386 - TSS79899 222 0.337837837837838 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000118971163175709 0 0 0 0 0 0 0 0.000151032691061177 0 0 0 0.000540832535099914 0 0 XM_003587678.2 KIF6 PREDICTED: Bos taurus kinesin family member 6 (KIF6), mRNA. 2e-15 86.0 85.00 0.337837837837838 0 noncoding 0 0 0 0 0.110103718525651 0.360729366731299 0.0707584500930134 0.391383517113649 ACTCTTCATTGCAGTCCCTGACCAGGGGTCGAACCCGGCCCTCTGCATTCGGAGCCGGGAGTCTTAGCCACTGAACCACCAAGGAAGCCCGATGCTGCGGTCTTGATTACTCGGGTCCCTGGCCGGGTCTGACCAGGATCGCCCGAGACTGTGGCTCTCACAGGGTCGAGATACCCAAAACCACCCCAGGAAAGCCTCCTTCCCCTTCTGGGATCTGCCCCC TCONS_00101905 . 3' 4818 TCONS_00101905 . 3' 5039 EMBV3_04028 GGTGCAGCCACAGCGTATGTTTCCATTTGGTGAGGAAGGTAGGATCCATAAAACTCAGGC Gene BVT0102_024356 + 0 NULL GK000001.2:154200074-154218713 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002744 TCONS_00006969 TCONS_00002746 2 XLOC_000675 XLOC_002531 Coding TCONS_00002746 XLOC_000675 Coding Coding EAF1 1:154189205-154203165 j TSS1400 4394 2 TCONS_00002746_9 252 0.0464269458352299 6 0.685650834587005 0.00613201319438714 0.00273845071460153 0.0033886427004068 0.00322040592175431 0.00409839946275721 0.000312772244829005 0.00196632331017038 0.00438559807749233 0.00175740609401374 0.000533153910589131 0.000993093037083497 0.00039106878538531 0.000140879462993686 0.00208349994159368 0.000539713743603648 0.00632379194129033 0.00509320990736503 0.00297466520880899 0.00372679421432705 0.00789353933557497 0.00266091682085897 0.00474112908743918 0.000403414989742327 0.00393292124676177 0.00344133687219206 0.00369134279165853 0.00102429879241134 0.00179638860620716 0.00051731932410186 0.00213685001002075 NM_001192153.1 EAF1 Bos taurus ELL associated factor 1 (EAF1), mRNA. 0.0 2172 99.67 0.275603095129722 NM_033083.6 EAF1 Homo sapiens ELL associated factor 1 (EAF1), mRNA. 0.0 1314 72.63 0.532999544833864 TCONS_00002746_2 sp|Q96JC9|EAF1_HUMAN EAF1_HUMAN ELL-associated factor 1; 2e-83 252 89.45 0.994818652849741 1 coding 1 1 0 0 -2.09907846857588 0.0491371021840369 -0.461673340036564 0.0817950627309808 TTACTAAGTTGGTGTTGTAGCAGAATGAAGGACAACGTGCAGTTTAAATAAGACACTTTACTGAAGTACCTGGCCTGCAGTTTGAGGCAGACGACTTTAAGCCGGCGTCTATAGATACTTCCTGTGAAGGAGAGCTTCAGGTCGGCAAAGGAGATGAAGTCACAATTACGCTGCCACATATCCCTGGATCCACACCACCGATGACTGTGTTCAAGGGGAACAAGCGGCCTTACCAGAAGGACTGTGTGCTGATCATCAATCACGACACTGGAGAGTATGTGCTGGAAAAGCTCAGCAGCAGCATCCAGGTCAAGAAGACGCGAGCTGAGGGGAGCAGTAAAATCCAAGCCCGAATGGAGCAGCAGCCCCCTCGACCCCCACAGCCATCCCAGCCGCCGCCACCTCCACCTATGTCGTTCAGAGCGCCAACGAAGCCTCCGGCTGGACCTAAAACCTCTCCCTTAAAAGATAACCCCTCACCTGAACCTCAGCTGGATGACATCAAAAGAGAACTGAGGGCCGAAGTGGACATCATTGAGCAGATGAGCAGCAGCAGCGGGAGCAGCTCCTCGGACTCGGAGAGCTCGTCAGGGAGCGACGACGACAGCTCCAGCAGTGGCGGCGAGGACAGCGGCCCTGCGTCGCCCCCGCAGCCCTGTGGCGGCCGGCCAGCCGTGGCCAACGGGACCGGAGCTGCGCGGCCGCCGGGAAGCACGCAGCTCATGAGCACCCTCAGAAATGACTTGCAGTTGAGCGAGTCTGGCAGTGACAGTGATGACTAGAGCCGGATCTTTTGAAATCAACTTTTTGGTGCACAGATCTGCCTCGAGAACAGGCTGCTTTAGCGTGCAGTCCACGCTGAGAGGAAAATGCGGGGATCGTGACTCTAGGAGGAATTGGAGGCTCTGAAGCACTCAGACGTGCATGTCTTTAACTTATGGTGATGGGTGATTTTCTCACGTAATTTTTGAACAATCTCAATGTTTCAAAGTTTTAAGTAGATCTATAGCAGAACTAACAGAATTGTATCTCTATTTGGTTAACACTGTTAATGGAAACTAGACAAATGTGCCCTGGTCTAGGTTCCTCAAAGGCCACTTCTCCTGGCCAGTGCTTCAGTGTCAAACCTCAGCAGCCACCAGCATGACCAAATGGTTTGCCCCAGTGAAAGGAGGGGTGGGGGTGGCGGCAGCCTCAAACCCCAGCACGGACGCATGTTCCAGCCACTTCCAGCTATGGACCCGAGGTGGTGAGGAGGTTCTGCCTGACCCGGCCTGGCAGGCCTGTGTAGAAACGGACTTCAGGAAGGGGTACGAGAGCGTCCGTGGGGGGGCCTGGATTCGTGGCTCAGCCCCACGCCTGCAGATGAGGAAGGGACGTGCGTGGCTGGCGTGGGGCCAGCGTCTTGCCCCAGACCAGGCCTTCCCACTTCTGCCCCTGAATCTTACTGGAACCAGAGAGCCTTGTCCATGGGCCTGTGTAAGAGCTGTGTTGTGCATCGGAGCTTTTCCTGGATTCCAAAAGATAGAAGTGTGGGTTCCTACTCTCCAGTTTAGATCCATGCAGTCCCTGAATACATCAGTCCCACGTGAGGGTCGGTGGGAAGGAAAGGAAGCCAGCAGCCATGGTGCTGATGCCTGTGACTTGCTTAAACTGGGGCTTTAAGCTCCGCATGGATCCATAACGAGAGGGCTTCTTTCGAAGGCTGCCAGTGGGGACGAGTGGGAGGGCTGAGGTGAGGAGGCCTCTGGGCAGATGGGCCGGCAGCTGCTCTCCAGACTGCGGTCTGGCTGGGAGGCATGCAGTGTACAATGAGCAGGTGTTGGCAGGGCTCCCCCGTTCTTGCTTTTGCACCGCTGTTTGTGCCTGAGTCCCAAGCTGGCTCATTTTTTATACGCAACCAGAAGGAAGTCACGGGATTGCCTTCTGTGGTGTGCCGTTTCCAGATGAATCTGTTATTGGGGGGAAGCGTCTGTACACCATGGATGTGTGATAAGTCGTCCTACAATCAGTGCGTTAGTATGGAGTCGTCCACTTCTGTCACCTGAATGATTATGTCCTGAGAAATATCTGTCGGCTTCGATTCAGCCGTATTGAGAACGTGAAGACTGACCTTTCTCCCGCCGGTGACCTCTCCCTCCTTGGCTAGTGGAGGGAAGCAGTCTGGACCCAGGAAGAAGCTAGGTGATTGGTGGCAGGGGCTTTGAGTTGAGCCTCACGAAGTCATCTGTGTCCCCCACTCGGTGGTCCCAGTAAGCTGGAGTCGGGGCCAGGCAGCCTGCTCACGCCACTCCACCAGCTGCGCTCAGGGTCACTCCAGCACCTGTGCTGGGTCCTCTGCCCATCACGCGGCTTCATGGAGTTCATGGCAGGTAGGAACTTACTTAGAATGAATTGATTGTTTTTAATTTCTTGGTAATGACAGCTCAGGGAAGCTGAAGGTCGTGGTTATGTATGTTAGTTACTCACTCATGTCCAACTCTTTGCGACCCCATGGACCGTAACCCTCCAGGCTCCTCTGTCCATAGGATTCTCCAGCAAGAATACTAGAGTGGGTTGCCATTGCCTTCTCCAGGGGATCTTCCTGAGTGAGGGATCGAGCTGGGTCTCCTGCACTTCAGGTGGATGCCTTCCCGTCTGAGCTGCCAGGGAAGCCTGAAGGTGATGGTTGGGAGACGTGAATTGTTTCTGGACGTGGGAATTGTTTCACCGCTCTTCACTTGCTCAGGCTGGGGCGGGCACCAGGAACTTGGACTAAAGATAGATCTATTTAAGCCTCTCTCCCTCCTTTCCTCTCCTCAGAGGCTTGATGCGCATGGCCAGCCCGGGGTCTGGGCCTGTGTGAGGTCTGTGGGTGCCTCGGCAGTGCCTGCCGGTGGCCTGCCTTGGGGGGTGGGCTCTGCACGCAGCCCCCGCCCCATCCCCGCATGCTGGCCCTGCAGGCCTGTCACAGCTGCTGGCCCAGCCCTGGTTCTGTTCTCCGCACAAGTCTGTGCTGGTTGCCTCTGCATGCCCTCCAGCTTTGCCCGGCAGAGTAAGGAATCCTTTCTTTTTGGAAATGAAGCCTCCAGCCTCACAGACTCCCCCTCACGAGTGCCCTCCTGCCAGCCAAGCTGGACCTGTTCTTCCTGCCTCTGTGCCTTGTCAGCCACCTGCCCCGGCCCCGCTCACGGGGCTCTGTGGGTGCCACCAGCCCACACGGACCTTCCCCTTGCTCAGGCGCTGGTCGGCGTGGGCCCTGAGCAGGCCCTGTGGTTCTCCTCTTGCCTGGAGCTCGCAGGAGCAGACTGGAGAGGCTTGCGGCCTGGTGTGAAGAGGGCACAGAACCGCGGGGACGCTCCCGGCCTCCAGGGACAGCTGGAGACTGTCCGACCGAAGCGTTAAAATGGCCTTTCCCTTGTTCTGTGTACCATCTGCCACTGGGTGCAGTGAAGCATCTGAGGAGCCGTGGCAAGCAAGCTGCCGTACGGGCGTGGTTCAGGGAAACGTAACAGACTAGAGATGTGTCGTGACGCCACTTATTAACTCTTATTTCTGTAGCAGAATCATTTTTTAAAAGTGTGGTTTTAATGTGTATGTGTTTCAGTGGTGGGAAAACTTGAAAATTCCAAGATCCTTATTACTTCCCTATTTGAGAGGCTGGTTAAGTAGGGTGTGTGTGGAGGGGTGTGTGCATGTGAAGTATTTATTACACTATTCTGAAAGAGTAATTGTCTCTCATGTGGATATGCATTAGGTGCAGCCACAGCGTATGTTTCCATTTGGTGAGGAAGGTAGGATCCATAAAACTCAGGCCTTAACCAGTAGGTTGGACGAGAAGACCAATTGAAATGTCATGAAATGTCTTTGTTGCTCCTGTTATTTCTGTCTTGAATTCATTGTCTCGTTCTTTAATGATTATTAAAATCTTGTGCCTGAAAGTTTTATTTTGCTTAATTATGAAGTAGACATGCATGTTTATATTTATGCAAAATATTTGCTGTAAAGTTTTTTTCTTTTGGTTTACTCTTTTTAAAAAAAATAAGTAAAAAATGAAGGTCAGCAATATACATTTCTCGAGTTTTCTTTTTTTTTTTTTTTTTTACTACATCTAGGAGTCAGTGAAAAATGTAGGGTTCTTTTAAGAATCCTTTGTGCTTAAGGCTAATTATCTAAATTGATTCCCTTTTTAATTTGGTGTTTCTGATCGTTAGCATTTACACTTCTGTTTTAAGAGGCCTGAAAATCAGAACCAAAGGATGACTGTAGCAACGCTCGTGGAGTCTGAGGCTGTACTGGGTCTGAGAACCCTGGGGGCATTAAACTGACTCCCTGGACGTGTCTCCTAGTCGTTTTAGTTCACCTGGACCGCCATACTACAACAGAGGGCCAATGTACACCCCCGACCCCCGGTC EMBV3_12223 CCAGGCACATCCCTAGCCAAAGCAAAACGGCTGAAGCTGGCAACAGAATGCCTTCCATTA Gene GeneID:532418|RG9MTD1:NM_001046323:17_cdna Constitutive 1 NULL GeneID:532418 1 GENE RG9MTD1 MGC137283 RNA (guanine-9-) methyltransferase domain containing 1 EMBV3_39743 AGGTAAAGACGTTGTGGCTGACCACGTTGGCTCCTATGGCACAGTGATCTCCCAATCTCA Gene GeneID:100337092|LOC100337092:XM_002697313:8_cdna Constitutive 0 NULL GeneID:100337092 23 GENE LOC100337092 NULL MHC class II antigen-like EMBV3_33939 GGGAGAAAGATGTCTCAGAGATTTCAACTGCGGGCCTGGACTTTGCTGCGCTCATCATTA Gene GeneID:509338|DKK4:XM_002698709:121_cdna Constitutive 0 NULL GeneID:509338 27 GENE DKK4 NULL dickkopf homolog 4 (Xenopus laevis) EMBV3_07048 ATCATCTGCGTGTTCCTGGAGAAGGACGAGAACATCTACCGAGAACGCCTCCCCCACTAC Gene GeneID:613568|MACROD1:NM_001046509:107_cdna Constitutive 0 NULL GeneID:613568 29 GENE MACROD1 LRP16 MGC137503 MACRO domain containing 1 EMBV3_25013 TCTGTAAAATTTTATGCTTTTGCTAAATTCTCGCCTATCTGAGGAATCCTCTGTGAGTCC Gene BVV0102_154490 + 0 NULL GK000007.2:109566547-109865526 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43238 AGCTGCTTGAGTAGGGGACAGGGAGAAAACCATGCTGAGGTGTGACCAATGAGGAGAAGT Gene GeneID:614423|LOC614423:XR_083813:21_cdna Constitutive 0 NULL GeneID:614423 12 PSEUDO LOC614423 NULL similar to phosphoglycerate mutase 1 (brain) EMBV3_12528 GTAAGTGTGTCATTCATTACTCAAGATCATCTTCACAATATCACCTGCCAGCCATGTGGG Gene GeneID:280802|GCG:NM_173916:43_cdna Constitutive 0 NULL GeneID:280802 2 GENE GCG NULL glucagon EMBV3_35130 CTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGCGGTGCTCCCGTGTTGGGTG Gene BVT0102_329366 + 1 EMBV3_24337 GK000001.2:42173699-42201556 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210178 TCONS_00233373 TCONS_00218178 TCONS_00010367 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00200531 TCONS_00198662 TCONS_00022064 TCONS_00088289 TCONS_00078532 TCONS_00056147 TCONS_00089425 TCONS_00116799 TCONS_00250553 TCONS_00019991 TCONS_00098385 TCONS_00189806 TCONS_00165811 TCONS_00032587 TCONS_00197973 TCONS_00148253 TCONS_00070841 TCONS_00141355 TCONS_00031938 TCONS_00207228 TCONS_00239410 TCONS_00141464 TCONS_00177994 30 XLOC_128688 XLOC_142855 XLOC_131641 XLOC_005918 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_120316 XLOC_012735 XLOC_053076 XLOC_047420 XLOC_033950 XLOC_054210 XLOC_070965 XLOC_153496 XLOC_010669 XLOC_058631 XLOC_115843 XLOC_100651 XLOC_018827 XLOC_119632 XLOC_090135 XLOC_042618 XLOC_085783 XLOC_018183 XLOC_125746 XLOC_146076 XLOC_085892 XLOC_107767 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_23349 TTATGTGAAATGGTATTATCAAATATCATTTATGCTATGAGAACTGAATGTATTGGTGAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_17736 CACGTGGAGGTGAAGGACCCTGAAGGCAAGTATCGTGAAGAGCGCTTCCGTCTGATCAGT Variant GeneID:508729|TMED4:XM_002686889:96_cdna 586^858 2 EMBV3_13458 GeneID:508729 4 GENE TMED4 NULL transmembrane emp24 protein transport domain containing 4 EMBV3_10649 TGCCAAAGAAGGATCCGGTCAAAATAGTGCGATGCCACGAGCACATAGAAATCCTCACGG Gene GeneID:515358|LOC515358:NM_001100368:29_cdna Constitutive 0 NULL GeneID:515358 13 GENE LOC515358 NULL hypothetical LOC515358 EMBV3_37294 GGTCACTGGAGTACCCCCATTTCATACACCCCAAAGGAAGCTCAAGCTATAGTGACGACA Gene BVT0102_099175 + 0 NULL GK000029.2:41808166-41809625 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165244 TCONS_00165246 TCONS_00165245 1 XLOC_100463 Coding TCONS_00165246 XLOC_100463 Coding Coding STX5 29:41808365-41837962 j TSS123474 3076 1 TCONS_00165246_2 355 0.0403120936280884 11 0.896438707933505 0.000349341816606153 6.82609495134161e-127 1.81612116227121e-14 0.000751607265713637 0.000747651072235228 0.000246582577054346 0.000727840968313484 0.000765255773038715 0.00122331876149626 0.000133855534816999 1.55352124900723e-13 5.78507164106246e-05 2.45251495434881e-05 6.33597983249711e-48 7.60273681700634e-42 8.07613778387531e-112 4.96341240855479e-82 3.5733546999771e-171 9.99777993855843e-05 0.000406838752734332 0.000134781546118776 9.49782041858368e-115 2.85270897577927e-125 4.92196966720628e-67 0.000168855892374246 0.000769498426594905 0.000625618211714825 0.000147589396113619 2.29970488626285e-276 0.00017004870925616 XM_005226904.1 STX5 PREDICTED: Bos taurus syntaxin 5 (STX5), transcript variant X1, 0.0 3259 100.00 0.587126137841352 NM_003164.4 STX5 Homo sapiens syntaxin 5 (STX5), transcript variant 1, mRNA. 0.0 2553 90.73 0.602080624187256 TCONS_00165246_2 sp|Q08DB5|STX5_BOVIN STX5_BOVIN Syntaxin-5; 0.0 727 100.00 0.997183098591549 2 coding 0 0 1 0 -1.89027444978407 0.251153605866234 -0.00934544405303561 0.863615666274718 GGGGGTGGGGTTACGTGTGGGTGACGTGGCGGCTTCCAGTCTTTGGTCGGGTTTCGGCGGCTTCGACTCCAGGGGGAGGAGGCGGTGACGGTCTGGGAGATTATAGCAGTGGCGGCGGCGGCAGGCGGCAGAAAGGAGTCCGAGGTTATGCGTCTCAATGATCCCGCGGAAACGCTACGGATCTAAGAACACGGATCAGGGTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTGTCCCCTGCAACTGCTGGCAGTAGCAGCAGCGACATCGCCCCTCTGCCCCCCCCAGTGGCCCTGGTCCCTCCCCCTCCCGACACCATGTCCTGCCGGGATCGGACCCAGGAGTTCCTGTCAGCCTGCAAGTCCCTGCAGAGCCGTCAGAATGGAATCCAGGCAAACAAGCCGGCTCTGCGTGCTGTCCGGCAGCGCAGTGAATTTACCCTCATGGCCAAGCGCATTGGGAAAGACCTCAGCAACACATTTGCCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGATAAGGCAGTGGAAATTGAGGAGCTAACTTATATCATCAAACAGGACATCAATAGCCTCAACAAACAAATTGCCCAGCTTCAGGACTTCGTGAGGGCCAAGGGCAGCCAGAGTGGCCGGCACCTGCAAACCCATTCCAACACCATCGTGGTCTCCCTGCAGTCAAAACTGGCCTCCATGTCCAACGACTTCAAGTCAGTTTTAGAAGTGAGGACAGAGAACCTGAAGCAGCAGAGAAGCCGGCGGGAGCAGTTCTCCCGGGCGCCTGTATCAGCCCTGCCCCTTGCCCCCAACCACCTGGGGGGCGGTGCTGTGGTTTTGGGGGCGGAGTCCCGAGCCTCTGGGGATGTGGCCATTGACATGATGGACTCTAGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGATTCTTACATCCAGAGCCGGGCAGACACCATGCAGAACATTGAGTCCACAATTGTTGAGCTGGGCTCCATCTTCCAGCAGTTGGCACACATGGTTAAGGAACAGGAAGAAACCATTCAGAGGATCGACGAGAATGTGCTGGGAGCCCAGCTGGACGTGGAGGCCGCCCACTCAGAGATCCTCAAGTACTTCCAGTCGGTCACATCCAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCTCATTGTCTTCTTCATCATCTTTGTGGTCTTCCTTGCCTGAACCCTCTCCACTCTGAGGCACTCCGTGGGGGTTTGGAACCCTTATGGGAGAGCAGGTGGCCAGAGCTGCCACTGAGCCTGTGCAGGGTGCTTGGGAGAAGGGCCCCGTTTCCTTGGAACTGCTAAGAATGACCACTGCCCTCGGTCCCCCACTCCTTGCCTCTGGCCACCCAGCCCTCCCCTCACCACCCTCCAGCCCATGAAACACACACGGTTCTGGATTTGGACTCTGCTGTGAAGTGGCTGGAAAGGAGCAGAGGCCAACTGAGGGGCTCGTCGGGGAGATTGTCTCTACCAGGAGATTTTTATAAACCCTCCCCAGCCTGTCGCAAAGGGAACTTTGGCAGCAAGGGGAGATGATGCCTTTCCCCACATTCTTGAGAGCAAGGAGAGGAAGTGAAACTGCCCCAGGGACCAACTTTCCCATCTGGGTTAGAATTTGACCTCTTCTTCCTCTCTTCACCACATGAGGCAGGGGGCCCTGAGCCCCTCGGCGGCCTGCACAACCCCAACTTTGGCTGCAGATGACTCTCAATCTGCCAAACGTGCTGCAGCCCGTTTTCTCCCAATTACAGCAAGACTGTCAGCCTCACTAGCCATGTCGTCATTTCTGGGTGGGAGCGCCGAAGAAGGGCCTAGGCAGAAATGGAGGGAGCCTGCTGCCCAGTATTACAACTGAAAGGGCTGGACTGATGACCCTGAGGGGCCAGGCTTTGGGCTCCATGTATACAGCTGCTTCCAGCGGGCCTAACCAAGTGCAGCAGTACTTAATTATCATGGAAAATTCCCTTCAAAGCAGGGTACACGATCCCAGAGTGATTCTCTGATTAGTGGTAACTTCCAGGACCATCTCCAGAAGTATTTGGACCTGTTTCATCTGCATCTTCCAGTCCCACCATTTTCCTTGGGCTGGATGAAGCAGGAGTTATGCCTGCTGCCAGGAGTGAAAGGTGAAGAATTTGTTCCCAGCTCCAGCTGAGGCTCTTGATCCCCTGTTGAAGCCCCTCACCAATTCAAGCCAATCACAGGAGAATGAAGTAGAGATCTGCCTGGAATACCTACCCTCCAGGAAGGTCAATATGCTTGTCAGTCTTTACCAGGACCCACAACCACATCATTCTGAGGTCACTGGAGTACCCCCATTTCATACACCCCAAAGGAAGCTCAAGCTATAGTGACAACAGTCACACATTGGGCTGGCTGTAGTACCTTGGGGTTGGGGGTGGTAGTTATCTAGGAGAGCCCTGGCCTTTCTTAGCCCTGGCATTTTCTCTCCGTTTGACCTGTTTTCAGGGGGTGCTCTTGCTTGCATCTTAACTTTAGTTGACCCACCATGTGGGTTTAAGCACAGCACATCGATGGTGGTTGGGGCGATCTGTGAAGACGATCGAAGCCTGACAAATGCAGTTTTTCTCATTTGACTCCGCAACTATTTGAGGGAGGGTTGCATAGATTGGAAATTTATTTCATAGTATTTGCTGAGTTCCTGGTACACGCTAGGTATGGTACTGAGCCAGGTGCTGGAGAGAAAAAAAAAGCCATGCATTAGTCAACTCCTTGCTGTCTTGGAGCTTACCTTCTAGTTTTCTATTTCATTTTATAGGCAAGGAAAGCAAGGCATAGATCTGTAGAAGGCAAAGGGCTGAGCTGAGACTTAAGCCCAGGCTGGATCCTCCTAGGGGTCTTGAAGCGGTCACTCCAAGGCACTGATCTCCCATTCCTCAGATGCCCTTCTTGTGGCCTTCCTTCCCTTTTTCAGTTTGAACCCTGGGATGCAGTGGCCATCTCTGCTTCAGCACCAACTTTGGAGGTGCCTGCCGGCGGACGATGAAAGCAGAGGGCAGGTGCGAGT EMBV3_30753 TTATTCAGGACCAACTGGACGCAGTCAGGAACGACCTTGGCCGTCATCCCTCGTCTCCCA Gene GeneID:615958|SHROOM1:NM_001102294:98_cdna Constitutive 0 NULL GeneID:615958 7 GENE SHROOM1 MGC152429 shroom family member 1 EMBV3_06597 CCACTGCTCCCAGGACAGATATTGTGAAGCTACTCTCGACTCTGAAACCTTCCCCTGGAT Gene GeneID:513015|TMEM145:NM_001110441:202_cdna Constitutive 0 NULL GeneID:513015 18 GENE TMEM145 MGC139647 transmembrane protein 145 EMBV3_10762 GGGATGGCAGGGGGTGCCTTTCCCGTTTTCAGCAAGGTAGTGATTATCTCAAGGAAAGAG Gene GeneID:785152|PRICKLE1:NM_001102534:33_cdna Constitutive 0 NULL GeneID:785152 5 GENE PRICKLE1 MGC148920 prickle homolog 1 (Drosophila) EMBV3_19515 AAACACAGTGACCTAGACCGGCCACTTTAATGTTATAGTTGGATTTCCATGTTTCCCAGG Gene GeneID:521829|YIPF5:NM_001034543:2_cdna Constitutive 0 NULL GeneID:521829 7 GENE YIPF5 MGC126987 Yip1 domain family, member 5 EMBV3_35563 AGGGACCTCTATCCCCAGAGGGCTCATCTTTATGTCTTAATAGGGAGAAACACCCACCTC Gene GeneID:100295932|LOC100295932:XM_002697604:85_cdna Constitutive 0 NULL GeneID:100295932 23 GENE LOC100295932 NULL hypothetical protein LOC100295932 EMBV3_37286 TGCATGTTTCTGGCCATCGCTTGCTGGGCGTGTGGATTTTCCCTGGCCATAGTACAAGTA Gene GeneID:508101|LOC508101:XM_002687032:111_cdna Constitutive 0 NULL GeneID:508101 4 GENE LOC508101 NULL similar to olfactory receptor OR7-15 EMBV3_32094 TACGGCGCTCATCCCTTGGCAGAAGTTCACGGGCTTTTCTTACATGCCTGTTCTCCTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15500 GCTGCTGTTGATTCTGTTTTCTCATCTGTAGAAGTGTTGCCCTGTTTTTGTGCCTTAGAG Gene GeneID:788719|FMO5:NM_001101304:7_cdna UTR3_Alt 2 NULL GeneID:788719 3 GENE FMO5 NULL flavin containing monooxygenase 5 EMBV3_37038 CTGTATGAGACTGCCCCATCCTGTATATGAAGCAGATTTGATCTTTGTCTTAAGTTCCTC Gene GeneID:613930|GNG10:NM_001114512:11_cdna Constitutive 0 NULL GeneID:613930 8 GENE GNG10 MGC128212 guanine nucleotide binding protein (G protein), gamma 10 EMBV3_31080 AGCCAATTTGCAGATAATCCAGTTGAAGAGCTGGTTTACTAACCCATTTTCCTAAAGTGG Gene BVV0102_445898 - 1 EMBV3_08005 GK000015.2:6429363-6472737 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30015 ACCTCTGCTATCCAGACAGGACTCACCGAGATCGTACCGAGAAGCACTCCACGATGCCAG Variant GeneID:538628|RUNX1T1:NM_001099385:70_cdna 281^453 3 EMBV3_30818 GeneID:538628 14 GENE RUNX1T1 NULL runt-related transcription factor 1; translocated to, 1 (cyclin D-related) EMBV3_01975 AAAAGAAATCGTAAGGGAAGCGGCATCAGGATCCAGGCCACTCCTCAGTTACAGCAGAGA Gene BVV0102_067878 + 1 EMBV3_02038 GK000013.2:76078158-76083303 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17682 AAATGGTCGCTTTCCCCTAGTCTAGACACGCTTTAAACAGCAGTCGTAAAAGTCAGTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29191 GATCTACCTCAGGGGAATGGCTTTTGCCTCGGACAGCTCAATTCGGACAACAAGAGTCAG Gene GeneID:535916|SMAD7:XM_002697763:298_cdna Constitutive 0 NULL GeneID:535916 24 GENE SMAD7 NULL SMAD family member 7 EMBV3_21217 GGTAACAGCGAAGAGGGCCCAGCAGGGTAATTTATGGCCAAGCTAATGTCAGTTGGTCCT Gene GeneID:617976|LDB2:NM_001046611:19_cdna UTR3_Alt 2 NULL GeneID:617976 6 GENE LDB2 MGC127025 LIM domain binding 2 EMBV3_01813 GGCTTTTTATGTGCCTATAATCGCTGTCTCCATGATCCACCGCTTCTGGAAAAGTGCCCC Gene GeneID:511502|LOC511502:XM_002693271:35_cdna Constitutive 0 NULL GeneID:511502 15 GENE LOC511502 NULL similar to olfactory receptor Olr142 EMBV3_27437 CTACGTTGGTGTATTTTATGTTACTGATATCTCCACTACTGATGGTGGTTGCCTTCGGGG Gene GeneID:615335|TP63:XM_002684837:178_cdna Constitutive 0 NULL GeneID:615335 1 GENE TP63 NULL tumor protein p63 EMBV3_18675 CTCCTGCGTGCCCTACGACCCCTTCGGTACACTTAGAAGTAGATTTTCCAGTTTTCATCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00388 GTCAGCTGCTTATCTCTCCTTCTTCTGAATTCTGGCCTGGTAGACAGAGCTTGGGATTTG Gene BVT0102_151497 + 0 NULL GK000019.2:38613065-38702128 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20790 TGAAAATTTTAAGGCACCTCGTTACCTTTCACAGCTGTAATCTTCCTGGGATCATCCCTG Gene GeneID:539159|CTH:NM_001024567:55_cdna Constitutive 0 NULL GeneID:539159 3 GENE CTH NULL cystathionase (cystathionine gamma-lyase) EMBV3_09911 CTCAGTAACACATGTGACTTTCCCTGATGATTATACCCCTCCAGGACACTAGTGACTCCC Gene BVT0102_002359 + 0 NULL GK000005.2:35175216-35473719 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191600 1 XLOC_116968 Coding TCONS_00191600 XLOC_116968 Coding Coding DBX2 5:35472727-35506978 j TSS143549 2258 1 TCONS_00191600_2 234 0.0695305580159433 4 0.934189781021898 2.71765396112193e-11 2.22506685453807e-05 3.253587303072e-05 0 4.73831195813879e-15 2.05941971277294e-05 6.35114385804551e-05 0.000128353040609247 0.000108323229927413 3.46215183654656e-05 8.11049964627924e-05 3.19763850544243e-13 3.93922336981491e-05 0 3.93991125369411e-11 0 0 0 7.63140836986245e-05 0.000257208406516897 3.3610804632087e-05 3.79624915234799e-19 0 0 3.17736952266435e-11 9.87221144712254e-05 2.85431944535604e-05 8.50768197404034e-06 0 2.66263752127242e-06 NM_001075461.1 DBX2 Bos taurus developing brain homeobox 2 (DBX2), mRNA. 0.0 1797 99.51 0.447298494242693 NM_001004329.2 DBX2 Homo sapiens developing brain homeobox 2 (DBX2), mRNA. 0.0 881 86.64 0.324623560673162 TCONS_00191600_2 sp|Q17QR5|DBX2_BOVIN DBX2_BOVIN Homeobox protein DBX2; 3e-161 455 99.13 0.978632478632479 1 coding AAAAGTAAAACAATACATGTGACCCCAAACTTTGAAGACATCCTTTAAAAACCACATTCTAAATAAATGCATCTAAATTTGCATAGGAGAGAGGCAGTGGGAAGTATGAATTGACAGAAGTCACAGTTTGAACTTATTATTATCAAGGTAAGACAGTTTCCAAAATGAAGTTGCCTTGTGGTTAACTGGAACACTTAAAGACACACAAGCTTGTTTCATCTGTCCAGTCTCTATTTAGCAGACTGTTAATAAATTGAAAAATACCCACATTTCTAGGGAAAAATAAAAAAAAAAAAAAGTAGCTGTAATCCTAAGGAATTCAGAGTTCTCACCCTGGTCTCTCTGAAGAGTCCCTGGCCACCTTTGCTTTGGTGGTGGCTTTCTTCCTGGAATTTGGACCCAAGCACCTGTTACTTGCCATTTAATCAACTCCAACTAAGATCCCTTTTCCTAAATCAAAATTTATTAGATCACCTCTTCTAAAGTGACTCCTAAATCAAATTTTACCAAAAAAGTGACTGGACATGAATTGCTGGAAACAGAAATTTTGTAAGGGTCTTCCAAAAAAACCTCATTTCCTTTCCTCTTAAAAACAAACAGGGGCCACATTTCATACACAAACAACGCATTCTTTAAAAGGTGCCTTTTCATCTGCACAAGTCTCAGTAACACATGTGACTTTCTCTGATGATTATACCCCTCCAGGACACTAGTGACTCCCATTCACTTCCCCTGGTGGCCCCGAAGTGACGTCAACCCCGGAGAGCCAGGGGTCGTCCAACAGGTGGTCCGCCGAGCGCTCTCCAAATGTGAGCGCCGTCCGCGCTCTGTGCCCGGCTCCAAGCTCCCCCCGGGCTCCGCAGGCTCACGGACCACGGCCGGGATCCCCTCGCCCCCGCACCCCTCCTCCTCCCGCTACGCGTCCCCTCCCCTCGCCAAAGTTCGGACTCTCGGGTTGCCCTTATTGTTGGCCGCGTCTGTCACTTTGTGGACTGGGTGACACGAATGGATGGGTTGGACACACCTTCCAGCCTACTAGAAAAAAAAAAAGTCCGGATCTGCATAGACAGCGGGAGGGACTCCCCGGAGCCCTCAGAGCCTACGCCGCGGGCCGGGGAAAAGCACAGCTCCCCCTCCCACATTCACTCCTCCCCGCCTTAAAAAAAAAAACAACGCTCCGCGCAAATAAATAATATCGTTCTCAGCCCGCCAGGGTCCTCGGTGTCCTCGCTTCCCTGCCGGCTGAGCGCGTTCCAGCGCGGCGGGAGGAGGCGGCGGCGGGAGGCGAGCGCGCAGAAGCCCCGGCGCGCATCATGCTCCCCAGCGCCGTGGCGGCCCACGCCGGCGCCTACTGGGACGTGGTGGCTTCCTCCTCGCTCCTGAACTTCCCCGCCGCTCCGGGCTTTGGCAACCTGGGCAAGAGTTTCCTGATCGAGAACTTGCTGCGGGCTGGGGGCGCCCCGCCGCTCGGACTCCCACCGCCCCAGCACCACGGCTCGGCAGCGGCTCTCGGCGCGGGCGCGCAGGTCCGGTCCCTGCCGGCCAGCCCCGTTCCCCTCAAGTTGTGCCCCGCGGCAGAACCAGTCAGCCCCGGCGGGGCGCCCTACGGCACACGGTGGGCGTTTCAAGTGCTCAGCCCCTCGGCGGACGGCGCCCGGCTGCCGGGCCGGGCTCCGGGGGACCCGGACTGTGCCTTCCAGCCACCAGCCCCAGCGCCTTCCAAGCCTTTTTTTCTGAGCGCCCCGCCATTCTACTCGGCGTGCTGCGGTGGGTCCTGTCGGCGCCCCGCATCCCCCACTGCTTTTGCAAGAGAAGAGAGTGTACTGCCTCTTCTGACCCAAGAATCTACTTCCAAAGTTCGGAGGGGCATTTTAAGAAGAGCTGTCTTTTCTGAGGACCAGAGAAAGGCTCTGGAGAAAATGTTTCAGAAGCAGAAATATATCAGCAAAACAGACCGAAAGAAACTTGCCATCAACTTGGGACTAAAAGAATCACAGATGGAAGAAGCTGTGACCTAGAAGCACATATATGTATTTTTAGGTAAAAATGGGATCACACTCTGCACATATTTTGATGTTTTCCAGAGGACAGTACGAATCACCTGTGTGACCAGCACACAGCTCAGGCGGTAGAATTTGACCATGGGGCCAGGTGCCCCCGGCACACCCGCTCCCAGGCACTACCTGCTCCTTCCTGACTGAACTGCATGGATTAGTTTGCCCATTTTTGTGCTTTGTATAAATAATATCACTCAGTTC EMBV3_32959 TCCTGCACTACAGAGGACAGACTGTGAAAGCTGCTCCAGGCAGCCACCAACTACCGCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38294 CGCGGCGCGGTCCCCGGCCGACCAGGACAGGCTGTTGAAAATCCTACAGCTACAGAGATT Variant GeneID:514960|SRP19:NM_001034478:9_cdna 107^182 2 EMBV3_35605 GeneID:514960 10 GENE SRP19 MGC128826 signal recognition particle 19kDa EMBV3_07245 CAGGGGTCCCCAACCTCTGAGGTCTAATGGCTGATGATCTGAGGTGGAACTGATGCAATA Gene GeneID:540615|UGT2B17:XM_002688325:190_cdna Constitutive 0 NULL GeneID:540615 6 GENE UGT2B17 UGT2B15 UDP glucuronosyltransferase 2 family, polypeptide B17 EMBV3_15902 GGTAAACCTTGCAAATATGTAACCTGTGTTGCGCAGATGCCGCATAAATTTGAGTGATTG Gene GeneID:516947|FOXG1:XM_002707774:162_cdna Constitutive 0 NULL GeneID:516947 21 GENE FOXG1 NULL forkhead box G1 EMBV3_39697 ACGAGTACCGTCAGCGCAGGGAGAGGAACAACATGGCTGTGAAAAAGAGCCGGTTGAAAA Gene GeneID:617530|CEBPG:NM_001034801:760_cdna Constitutive 0 NULL GeneID:617530 18 GENE CEBPG MGC127564 CCAAT/enhancer binding protein (C/EBP), gamma EMBV3_29893 CAGCTGAGGGACAGGGAGCTATTGCACTGTATATCTTAGAGAAAACGCTGGGGAAGGGAG Gene GeneID:100336746|LOC100336746:XM_002685969:274_cdna Constitutive 0 NULL GeneID:100336746 3 GENE LOC100336746 NULL hypothetical protein LOC100336746 EMBV3_40525 GGGACTCACGTATAAACAAGCATCAGATCATGGAATTGATCATGCACAGCTTCCCCTTGG Gene GeneID:616544|RG9MTD2:NM_001035477:17_cdna UTR3_Alt 2 NULL GeneID:616544 6 GENE RG9MTD2 MGC128771 RNA (guanine-9-) methyltransferase domain containing 2 EMBV3_43526 AGTGACGCCTGGACTCTTACAGGTTCTGAAGGCTGTGTACTTCGCCTGCTACTCCAAAGC Variant GeneID:533794|SLC25A33:NM_001076002:82_cdna 424^501 1 EMBV3_43297 GeneID:533794 16 GENE SLC25A33 MGC139420 solute carrier family 25, member 33 EMBV3_18598 TCCTGGATCTATGCAGAAGTCTGAAACTATGAGGAAAACGCAGGAGGACCGTTGGGCTGT Gene GeneID:525413|LOC525413:XR_083627:105_cdna Constitutive 0 NULL GeneID:525413 3 PSEUDO LOC525413 NULL similar to synaptonemal complex protein 1 EMBV3_15262 ACTCCAAAGGAGGCATTACCAGTCTCTCACTCAGCTTTCACGTGCTGGACCCTTCAGAGA Gene GeneID:100296801|LOC100296801:XM_002697673:156_cdna Constitutive 0 NULL GeneID:100296801 24 GENE LOC100296801 NULL hypothetical protein LOC100296801 EMBV3_30283 CTGGCTGTGTGACCCTGGCTTTGGCCTCAATTTTCTCACCCACAAAGCGGGAACCATAAT Gene BVT0102_084129 + 0 NULL GK000013.2:78772195-78845235 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03890 GCAGCCTGATTTCTCTGCACATCTATGCCCTCCATAGGAATAGTACAGTGTGGCCTGACC Gene GeneID:540149|CYP4B1:NM_001076202:269_cdna Constitutive 0 NULL GeneID:540149 3 GENE CYP4B1 MGC140793 cytochrome P450, family 4, subfamily B, polypeptide 1 EMBV3_32762 ACTCCCGTTTGGAAACCTGCCCCACTGGACCCAGAATCAGAGGGAAGGAAGATGGAACAT Gene GeneID:505218|CHDH:XM_002697008:406_cdna Constitutive 0 NULL GeneID:505218 22 GENE CHDH NULL choline dehydrogenase EMBV3_36989 GTGCACAGTAAGAACAAGAAGGAGGAGAAGGTGAAGAAACAGCGGTCAGCAGACAAGGAG Gene GeneID:512312|PTPN6:NM_001098017:37_cdna Constitutive 0 NULL GeneID:512312 5 GENE PTPN6 NULL protein tyrosine phosphatase, non-receptor type 6 EMBV3_17827 GGAGCTAATTACTGCCTGGCCATTTGTATACGCCCCTGCCTTTGCAATCATGAAACCTGG Gene GeneID:515902|PCCB:NM_001038548:36_cdna Constitutive 1 NULL GeneID:515902 1 GENE PCCB MGC134255 propionyl Coenzyme A carboxylase, beta polypeptide EMBV3_00065 GATCCAACTGCTGCTGGTGACGTCCGTCCAATAATGCACCATCCCCCAAATCAGATTGAT Gene GeneID:768014|KIF2A:NM_001077073:18_cdna Constitutive 0 NULL GeneID:768014 20 GENE KIF2A MGC133806 kinesin heavy chain member 2A EMBV3_11010 ATCAGCATGAATGGGACTGTGACTGCTTGTTCTTGTGGATGTGAGGCCCTTTTGGACACC Gene GeneID:337897|PAG2:NM_176614:114_cdna Constitutive 0 NULL GeneID:337897 29 GENE PAG2 NULL pregnancy-associated glycoprotein 2 EMBV3_16145 GAACTTGCAAAACTTTGCAGCATCTAGCAGAACAAAATGGAAGGGCTTCAGCAGGGTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17623 GTGCTTTGTACTTGGTGCGGGGATTTTGAGGGACTTTGCACTGGACTCTGAGAACCTTTT Gene GeneID:516290|ARHGEF5:NM_001110075:670_cdna Constitutive 0 NULL GeneID:516290 4 GENE ARHGEF5 MGC138953 Rho guanine nucleotide exchange factor (GEF) 5 EMBV3_32109 ATACCCCAGAGGGGAGTCACTGGGTTGGAGGGAGAAGCACTTTTCAGACTCGCTTTGCAA Gene BVV0102_013329 + 1 EMBV3_21297 GK000021.2:58098929-58163027 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07611 GTGACAAATACAAGACCGGAGTTATTGATGGGCCTGCATGTAATAGCCTTTGTGTCACAG Gene GeneID:541171|MGC143035:NM_001083500:186_cdna UTR3_Alt 2 NULL GeneID:541171 3 GENE MGC143035 NULL hypothetical LOC541171 EMBV3_42605 GGCATGATCAACGGTGACCTCTTCCTTTACGAGTGTGTGAATTCCAAGGTGTTCCCTCTG Gene GeneID:537999|NWD1:NM_001102210:101_cdna UTR3_Alt 2 NULL GeneID:537999 7 GENE NWD1 MGC166244 NACHT and WD repeat domain containing 1 EMBV3_24183 CAGAATGCAGGCTGTGACTCTAAAGCTGGGGCCTTGATGACCCAAGACTATCTTTTGGAG Gene GeneID:614707|SEMA7A:XM_002696637:188_cdna Constitutive 0 NULL GeneID:614707 21 GENE SEMA7A NULL semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) EMBV3_38413 GGTGAACACAGCAGTCCAGTTAATCTTGGTGGCAGCTTCTTTGGCAGCTCCAGTTTTCAA Gene GeneID:512761|CRLS1:NM_001098951:1012_cdna UTR3_Alt 3 NULL GeneID:512761 13 GENE CRLS1 MGC143123 cardiolipin synthase 1 EMBV3_23496 AGAAAGAGGTGGATTATGTCAGTGGGGTAAAGGGAGCTTGGGCTTGGGTAGATGAAAGCC Gene BVV0102_156019 + 0 NULL GK000022.2:54057182-54104728 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129143 1 XLOC_078046 NonCoding TCONS_00129143 XLOC_078046 NonCoding NonCoding - 22:54096022-54101961 - TSS96133 1433 1 TCONS_00129143_2 69 0.0844382414515003 2 0.759009767598518 0.000622088842256409 0.000297877221740855 0.000487061273405751 0.000114285871333162 7.98629259976076e-05 4.73631109130813e-05 0.000124331403449841 0.000107639712684464 0.000412150495994675 3.89231678048888e-05 1.59747939671641e-06 4.29472667498857e-12 1.57847048025177e-05 0.000888338376402967 7.18976722814399e-05 0.000131438173055104 6.04749618580037e-05 3.49536806237879e-11 0.000187721221419281 0.000139350823979873 5.68875989608983e-05 6.68068813747861e-06 8.96278464874682e-05 0.000106027890953166 0.000125969599219231 0.000613206951870887 0.000598838898484433 2.46967352653655e-11 8.68724393804697e-12 5.43443617573626e-12 XR_229481.1 LOC101909747 PREDICTED: Bos taurus uncharacterized LOC101909747 (LOC101909747), 0.0 710 100.00 0.273551988834613 NM_020347.3 LZTFL1 Homo sapiens leucine zipper transcription factor-like 1 (LZTFL1), 2e-30 138 75.23 0.145150034891835 0 noncoding 0 0 0 0 -0.465401112166735 0.0656200022717617 0.0839279438639404 0.23116364465046 TTTTTTTTCAATTGTGACCCATTTTAAGTTGCACTGTGTAGGAGCCAAATTCAACCTAAGCTCTCAAAGAATTATCTACACTAGCTCGTCTGTTCCTGAGATAGGGATGATGGTAAACGTCCTGCCCCAGCTTTGAGTGTCCCAGTGTCTGGTTCTGTGCTCCTTCTCATTTCAGTGTCTATCATGTGGGGCTCACTTTCTAGTTTACAGGCTGCCTCCCCAGTGATTGTATCCGCTTGTGTTTGTCTTCTGAGCCTCTGAAATGCCCCCTGAATGACCTATGCCCATTCATTGGCTTTCATCTACCCAAGCCCAAGCTCCCTTTACCCCACTGACATAATCCACCTCTTTCTAGACCTCTGCCTCTTCCAGAACAGTGGTTCTTTTTTGTCTTCTTAGCCACACCATGCAACATCTGGGATCTTAATTCCCTGACCAGGGATAGAACCTATGTCCCCTGATGGGGAGTCCAGAGTCCCAACCACTGAACCACCAGGGAAGTCCCTAGGATAGTGCTTCATAAAGAGTGGGCCACAGTCAGCCCTGGAGGTCGGTAAAAATTGCAGATTCCAAAGACCCAAGCTTGACTTCGTGATTCAGGATTTCTGGAGGTGAGGCCACGGAAGCATTTGTACAACACCTTCCCCTGATGATTCTAGGCATAACAGTTTGAAATACACTGCTCTTTCACCAGTTTCCGTTTGCGGTTGTTTTGTTGTTGTTTGTTTTTAAGGGAAAAGGCGCTATATTAGAGATTTTTTTTACCAAGAATGTAAGAAGAAATAGCAGTGTGGAGCGGGTTGTTCAAAGGTCTGTCCAGGAATATGGCAGCTCTGGTGCTGGTGGCCTATTTCAGCCAAGTAGGAAGTCTGGGAGAGGAGAGAATTAAGTCTGGGACGCCCCCACGAGTCCGCTGGAAGGTCAGGAGTCAGCAGTCGTGGCAACGGCCATTCGTCGGGGCCGCCAGGCCACAGGAAGTGCTGGGCAAGGCCGGAGCAGCAAGACTGGCTAGGCTGCCCCGCGGCTCTTGGTAGGGATTGGGTGCCAGGCAGCCGCGCCTTTCCCGTTACTCTTGGCAACGGCGGCCGCTCCTGTAGTCGGCGTGGCGCGTGAGGGCGGGACTTCCCGCGCCTAGGAGCAAGTGCGCACGCGGCGGTCGGCTGGTCTCGCGGCACTTCTGTCGCGTGATCTTGAGAACCAATCAAAGTGCGTAACTCCCTAGTCACGTGCGTCTGTTCCCGTTAGCAACGCTTCTAAACAACCCGCCCTACCTCGCGTCTGGCGCGGTCCAGTGTTTCTCGACGACCCCGGGCTTGGTGAGGCTGAGCCTGGCCTCTGCCGCTTTTCCAGACCGTTGACTTCCCCCCCGCGCCGCAATGGCAGAGTTGGGTCTAAATGAGCACCATCAAAATGAAGTTATTAATTATATGCGN TCONS_00127439 TCONS_00127440 r 5' 8653 TCONS_00127439 TCONS_00127440 r 5' 2768 EMBV3_19185 CAGCGTTGTTGAAGACAGAATAATGCCCCCCTCCTTCAAAGTTGTCTATGTCCTAATTCC Gene GeneID:100300556|LOC100300556:XM_002691018:357_cdna Constitutive 0 NULL GeneID:100300556 10 GENE LOC100300556 NULL similar to cytochrome c oxidase, subunit VIIc EMBV3_09352 CAACTATGACCGGGATATCTTGACCCTTGACCTCAGCCGAATCACCCCCAACCTCATGAA Gene GeneID:524222|ECM1:NM_001099706:106_cdna Constitutive 0 NULL GeneID:524222 3 GENE ECM1 NULL extracellular matrix protein 1 EMBV3_40239 GTGGGCTTGGGAGGCTGGAGCTCCGCGCCTGAGAGGAAAATTTATTGGAGGAAGTTTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03280 AGGGAGTGTCAATTCCTGCCTGCAGGGTATATTCCATTCTGGTTTGGACCATTGAGCCAC Gene BVV0102_060429 + 0 NULL GK000015.2:14778588-14924717 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058345 1 XLOC_036077 NonCoding TCONS_00058345 XLOC_036077 NonCoding NonCoding - 15:14837780-14846219 - TSS43983 1526 2 TCONS_00058345_5 80 0.334862385321101 2 0.819388480682626 2.48584843820535e-05 2.78212536024723e-05 0.000135480119964265 2.52019674517456e-24 1.1870812785964e-26 6.24180058576806e-56 1.96079490217727e-05 9.38167269551557e-26 4.73823846689364e-24 0 6.90054361459679e-06 2.30595500713275e-20 8.47824555305983e-26 0 1.9490202772832e-18 1.02894555518952e-22 2.28750905648068e-05 0.000126156398400304 6.517570224626e-06 3.80266933810315e-65 5.71767332520271e-25 2.55719703992102e-26 0.000970851040139593 0.000827070468666775 7.59717097392325e-26 1.55284301602155e-25 5.41147322174287e-25 1.30540788906405e-20 4.04948515331192e-05 3.77594496576008e-05 XM_005213807.1 TNFRSF19 PREDICTED: Bos taurus tumor necrosis factor receptor superfamily, member 19 (TNFRSF19), transcript variant X1, mRNA. 4e-110 403 93.92 0.171690694626474 0 noncoding TCCACCCCTTCCCCCATTATCCTCTATGCACAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGCTCTCTCTCCCAAATTCTGGCTGAGTCTCCATCTGGAGCGTGGAACCCGCCATGCTTGCTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTTGGGAGAACGGAGGGATGCCTGCGGCCTGCATGGAAGATTGTGGTGGTGGAAGCCTAAGGAGCTCTCCCCCAAGACCTCACTCTTGCTTCAAGATTCTCAGGTCCTTTCTCTTTTATTCCCCGAAAGATCTTCAGAGTTAGGCAATTTAGAGTCACATTGATGTTGCCGCACACCCGCAGTGGTGTAGGATGGATAGAGTGCCAAGAAGAAATTTCCTTAAGGAGGAGGCGTTTCTTACTTACAAGGTGTGGATTTAGAGACTCTAAAAATCCTTTTTGACTCCTTTACTCAAGCATTTCCCTTCCTGATCCTGCGAAAGTTCTTGGAATGTCCCCAAATCACCTACTCCCTCAGGTTTGGGTGCTAAAGTCTTTTGTGAAGTACGTGTGCTGTGTAGGTGCAGGAACCAAGAAGAATTGAACTCAGATTAATTTATCAGTTGCTATGCTATGCTAAGTCACTTCAGTCATGTCCGACTCAGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACCAGAGTGAGTTGTCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGTCTCTGACTCTTAGCGACCCCATGGATTGCAGCCTAACAGGCTCCTCCGTCTATGGGATTTTCCAAGCAAGAGTACTGGAGTGGGGTGCCAAGCCATAGTAATTTAGCAAGGGGATAGGATACGCCTGAGGGAAAAGGATGTGAGAGAGGTGAGATTTGATATGGGAAGAGAAGTGATTCTTACCTTGGGTGGTTTTAAATTCCTTAGAGAGTATTTCAAAGACCTTCTCCCCAGGGGGGGGAAAAAAAAATACATACAATGGAAGTGACTTTTGCACCTGGGTACGTTCAAAAGTAAAAACTTAGAGGCAATGTTTTGTTTGAAAAGCCCTTAGCTAATCTATGAAGAATCGGATAAGTGGTTTAGAGGTATTTTGCTTTTCAGTAGTTTTTACGCATATTGGAATTTGATTATCACTGATCTAGACCAAAAGTGGTATAAAAAGAATATATATATTCTGATATCTGGCCCTACACAACATTCCGCCTTTGAAGTACCTATTAAACTTCAGAAGGAGAAAGGGAGTGTCAATTCCTGCCTGCAGGGTATATTCCATTCTGGTTTGGACTATTGAGCCACTATAACCTTAATGCATGCTAATAGGTTTGTTTGTGGTTGAAAGTTAAAAGTAAGTAGTTGCAGGTCTAGATTCTAAAGCCAGAATAGAAGTTAAATTTGCTGTTCCCCTGAA TCONS_00058340 TCONS_00058341 TCONS_00058342 TCONS_00058343 s 3' 57712 TCONS_00058340 TCONS_00058341 TCONS_00058342 TCONS_00058343 s 3' 57712 EMBV3_00183 CGAGGAGACTGCAGGGCCGTGATCATCTTCATAGCCATTCTGAGCTTCCTGGTCTTTACT Gene GeneID:783010|LOC783010:XM_002690376:43_cdna Constitutive 0 NULL GeneID:783010 9 GENE LOC783010 NULL similar to MAS proto-oncogene EMBV3_08489 TCCAGGCGGCGCGGAACGGAGTTGCTAACGGCCTATGGGAGGCCACATGCCAATGATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36966 GAAAAGAAATTCATTGCTATGAAGTCTTGCTGTTGCTCCTGCTGCTAAGTCTCCTCAGTC Gene BVV0102_427323 - 1 EMBV3_33240 GK000009.2:53352400-53359608 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24596 TGTGGGCAGCTGGCTTCAGTGGCATGGTTGAGTGGCTTTGGCAATTCTCTCATAATGGCA Gene GeneID:528373|LOC528373:XM_002697495:197_cdna Constitutive 0 NULL GeneID:528373 23 GENE LOC528373 NULL similar to olfactory receptor 1361 EMBV3_05158 AGGAGACACAGGCGACGTAGTGGAGAAAAAGGAGGGTCCAAAGGGAGAGAGAGCAGTTAA Gene BVT0102_338484 + 0 NULL GK000007.2:2487190-2505456 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00010779 TCONS_00253025 TCONS_00200933 TCONS_00250197 TCONS_00055302 TCONS_00152859 TCONS_00123169 TCONS_00176249 TCONS_00038457 TCONS_00186108 TCONS_00175865 TCONS_00109859 TCONS_00023615 TCONS_00252354 TCONS_00008225 TCONS_00009883 TCONS_00135547 TCONS_00010052 TCONS_00238439 TCONS_00161793 TCONS_00175545 TCONS_00208127 TCONS_00137302 TCONS_00040195 TCONS_00157488 TCONS_00238457 TCONS_00249989 TCONS_00207068 TCONS_00190323 TCONS_00072815 TCONS_00206861 TCONS_00250580 TCONS_00218553 TCONS_00033746 TCONS_00253665 TCONS_00187057 TCONS_00019962 TCONS_00133066 TCONS_00063180 TCONS_00245928 TCONS_00153219 TCONS_00185807 TCONS_00223462 TCONS_00124845 TCONS_00030942 TCONS_00135701 TCONS_00006827 TCONS_00022065 TCONS_00020016 TCONS_00201733 TCONS_00209835 TCONS_00031911 TCONS_00156732 TCONS_00179470 TCONS_00056147 TCONS_00154085 TCONS_00070810 TCONS_00207359 TCONS_00063487 TCONS_00175199 TCONS_00251915 TCONS_00030941 TCONS_00250938 TCONS_00156870 TCONS_00050046 66 XLOC_006139 XLOC_131641 XLOC_006330 XLOC_155966 XLOC_122583 XLOC_153140 XLOC_033110 XLOC_092624 XLOC_074723 XLOC_106028 XLOC_022281 XLOC_112161 XLOC_105644 XLOC_065763 XLOC_014282 XLOC_155295 XLOC_003783 XLOC_005436 XLOC_081770 XLOC_005604 XLOC_145106 XLOC_098678 XLOC_105326 XLOC_126640 XLOC_083512 XLOC_024012 XLOC_095943 XLOC_145124 XLOC_152932 XLOC_125587 XLOC_116358 XLOC_044583 XLOC_125381 XLOC_153523 XLOC_131873 XLOC_019979 XLOC_156604 XLOC_113105 XLOC_010640 XLOC_080989 XLOC_037907 XLOC_150855 XLOC_092984 XLOC_111860 XLOC_136762 XLOC_076388 XLOC_017192 XLOC_081924 XLOC_002389 XLOC_012736 XLOC_010694 XLOC_123378 XLOC_128346 XLOC_018156 XLOC_095192 XLOC_109243 XLOC_033950 XLOC_093846 XLOC_042587 XLOC_125876 XLOC_038214 XLOC_104982 XLOC_154856 XLOC_153881 XLOC_095330 XLOC_030177 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_09209 CCTGTTTGAGGACCCCCATGTGCCTTTTAATGTCCGGTGTGAGAGGAGGGAACCCAAGGT Gene GeneID:520994|PTCH1:XM_002689829:20_cdna UTR3_Alt 2 NULL GeneID:520994 8 GENE PTCH1 NULL patched homolog 1 (Drosophila) EMBV3_38640 AGAGACAAGGTGAGAAAGAGGAAACCAAGGAAATTCAGGTCGTCAGCGAGGAGGAGCTTC Gene GeneID:517052|GOLM1:XM_002689818:16_cdna Constitutive 0 NULL GeneID:517052 8 GENE GOLM1 NULL golgi membrane protein 1 EMBV3_36597 CTCCGGCCGCCGGGTTCTCACCTCGCCATGGTCCACTCAGAACCAGCCACTGCTTGTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25919 CTATCCTCACACTGTTACACCCTCTTCCTTCAGGTTTGAGAAATAGAGTCTCTGTGAGGG Gene BVT0102_202544 + 0 NULL GK000020.2:11746627-11939539 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08289 GCTCTCTGACATACATCACAGAGGGATCCTCTATGACCCCCCTCCCAGAATGTTGGAAAT Gene BVV0102_141812 - 1 EMBV3_30292 GK000007.2:11310972-11324605 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229388 TCONS_00222777 TCONS_00209712 TCONS_00166695 TCONS_00241769 TCONS_00140807 TCONS_00232986 TCONS_00199036 TCONS_00124582 TCONS_00091663 TCONS_00081008 TCONS_00091220 TCONS_00006307 TCONS_00007086 14 XLOC_138883 XLOC_136084 XLOC_128223 XLOC_101531 XLOC_148433 XLOC_085236 XLOC_142468 XLOC_120689 XLOC_076126 XLOC_056436 XLOC_049890 XLOC_055996 XLOC_001870 XLOC_002648 Coding TCONS_00007086 XLOC_002648 NonCoding NonCoding - 1:37454848-37455334 - TSS4163 486 2 TCONS_00007086_2 48 0.796296296296296 1 0 0 0 0 0 0 0 0 0 0 9.4067056350201e-07 1.57008762283997e-06 1.22622928375616e-06 0 0 0 9.82735425465441e-05 0.00803934631566828 0.000160045067891931 0 1.12099833122423e-05 0 1.65412690339641e-05 3.83824073258849e-05 2.15594454874111e-05 1.58401441150031e-06 0 0 0 0 0 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 9e-93 343 80.05 0.792181069958848 NM_020729.2 ODF2L Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), 3e-41 172 70.18 0.796296296296296 0 noncoding GTTTCCTTTGATGTGCAGAAGCTTTTAAGGTTAATTAGGTCCCATTTGTTTATTTTTGCTTTTATTTCCAATATTCTGGGAGGTGGGTCATAGAGGATCCTGCTGTGATGTATGTCAGAGAGTGTTTTGCCTATGTTCTCCTCTAGGAGTTTTCTAGTTTCTGGTCTTATGTTTAGATCTTTAATCCATTCTGAGTTTATTTTTGTGTATGGTGTTTGAAAGTGGTCTAGTTTCATTCTTTTACAAGTGGTTGACCAGATTTCCCAGCACCACTTGTTAAAGAGATTGTCTTTAATCCATTGTATATTCTTGCCTCCTTTGTCAAAGATAAGGTGTCCATATGTGCGTGGATTTATCTCTGGGCTTTCTATTTTATTCCATTGATCTAGTACCAAATAGCTGCACTCTATCAAGACACACATATGCAACTGTTTATTTACTTGACTCTATTTCTTACAAGATGGTAAATATCATGAGATCAGGTAC TCONS_00000351 . 3' 331386 TCONS_00000351 . 3' 331871 EMBV3_33671 GCTGACTTTCAACATCCACTGAAAGGAATTCAGGGTGGAAAGCAGAAATGCACTCTGTGC Gene BVV0102_071380 - 1 EMBV3_40183 GK000022.2:6554797-6666780 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129705 1 XLOC_078418 NonCoding TCONS_00129705 XLOC_078418 NonCoding NonCoding - 22:6662280-6663098 - TSS96572 818 1 TCONS_00129705_1 51 0.793398533007335 1 0 0 0 0 0 0 0 0 0 0 0.00161964493495413 1.67910886777934e-05 0.000197331021944206 0 0 0 0.000161439935078408 0 3.06734560329253e-05 0 1.7582969436768e-06 0 6.3501964296129e-05 0 2.04946564160546e-05 0 0 0 2.34845326739453e-05 2.37388804441508e-05 1.46998496417159e-05 XM_005193557.1 LOC521257 PREDICTED: Bos taurus uncharacterized LOC521257 (LOC521257), mRNA. 7e-59 232 77.96 0.371638141809291 0 noncoding 0 0 0 0 0.0306554982303223 0.823883141890282 0.00486343951008003 0.917009024387774 GAGGGGTACATGAAGTGAAGCATGTGTTTTTTGCAGGTTTCTACTAGTCACGAGGAGAAGTGGTCATCGTGAAGGATTTTAGTGCTTTTCTAGATAATGAGGAGATACAAGAATTGGGCTCATAAAATCAGCTCCTGAAAATATTTAACTATCTGAAGCCCTGTTCTGCCAGTTTTTCCCAAAGCACAGAGTGCATTTCTGCTTTCCACCCTGAATTCCTTTCAGTGGATGTTGAAAGTCAGCAGCTATAGCAGCAAGAGATTTAATCCTTGTAGAGGCAGATGGCAAGTGCCAATTTGTACTTCACAAGATTCTGTGCTTTCACTGCCTAGGGCCCAGGTTCAATCCCCAGTTGGGAAACTAAGGTTGCCACATGCCACGTGATATGGCAAAAAAATAAAATAAATAAAATAAAAAATAACTAATAAGAACCTACTGTATAGTACAAAGAACTCTACTCAATACTCTGTGATGATCTATATGGGAATGGGATCTAAAAAAGAATGAAAATATTATCGTACAGAGAACTCTACTCAGTACTCTGTAATGATCTATATGGGAATGGAATCTAAAAAAGAATGAAAATATGCACATGTACAACTGAATCACTTTGCTATACACCTGAAACTAACACAACAATGTAAATCAACTATACTCCAATAAACATTAATTAAAAACAAACAGGCTCCCACCTGGCCTCTGTCTCCTGGCCCTGAGGATGTCAAGCTCCTTCCAGAAAGTCTACAATGGCTTCTTCTGCCCTTAGGATTTCAGTTTTAATTCTCTGATATGGTTTACAAGGCCAATCATGACCAGAC TCONS_00125842 . 5' 3679 TCONS_00125842 . 5' 3679 EMBV3_05764 AAAATGAAAGTGAGCCCGAGGAACCATCTGGTGTGGAGGGTGCAGCTTTCCAGAGTAGAC Variant GeneID:532997|KDM1A:XM_002685716:415_cdna 645^704 1 EMBV3_13988 GeneID:532997 2 GENE KDM1A AOF2 KDM1 lysine (K)-specific demethylase 1A EMBV3_07879 CCGCCGTTCGTAGCGTTTTATCTTGTCTACACATGGGGAACGCAGGAGTTTGAGAAATCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03361 CATTGGAGCTGAAAAGGCCTGACTGGGAATTCCAGCTTCCTCACTTCTGTGTTCTCAACC Gene BVT0102_230996 + 0 NULL GK000030.2:35618803-35626413 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250222 1 XLOC_153165 NonCoding TCONS_00250222 XLOC_153165 NonCoding NonCoding - X:35619112-35620137 - TSS187443 1025 1 TCONS_00250222_2 57 0.294634146341463 1 0 0 0 0 7.36509999999675e-07 4.81676026546204e-06 3.48981149653649e-06 0 0 0 0 2.23335331804201e-06 0 0 0 0 0.00146874175926412 0.000291552177696356 0.000195831521957889 0 0 0 0.00101838178525062 8.95029226759495e-06 0.00044160497814399 0 0 0 9.37090659056153e-05 0.000127877171954053 8.79841314996485e-05 XR_083500.2 LOC785342 PREDICTED: Bos taurus uncharacterized LOC785342 (LOC785342), 0.0 1849 100.00 0.999024390243902 NM_001129828.1 CSAG3 Homo sapiens CSAG family, member 3 (CSAG3), transcript variant 2, 1e-31 141 78.02 0.169756097560976 0 noncoding 0 0 0 0 -0.00704463707173908 0.963948546343869 0.0296730587805924 0.638889834927208 CCATTCAAGAGGGCAAACAAGACACAATACCTGTAGAATGATCCTATTTAAATTAACCATATTGTATATGCATATATTTATATGTATGAGTGTTAAAGGAATAGGCAGAGTTCTGAAAGGATGTTCACTGAGAGGTTGAAGTGTTCTTCTTTGTGAAGGGAAGGGGACAGAGGTGAGAGTGTGACACTATTTCTTCTCTATTCTTTCCATTGTTTGAACTGTTGAAAATACAGTTAGGGAGCATGGTAGCTGTTTTTATGTGTCAACTTGGCTAGGCTATACTGCCCAGTTGCTTGGTTTAACATGTCTCTAGATGTTGCTGTGAAGTTATTTTTACATGTGATCAACATTTAAATCAGTGGACTATAAATAGATTATTCTCCATAATCTAAGTTGGCTGCATCCATACAGTTGAAGGCTTTAAGAGAAAAAGACAGGTCCCTCAAAGAGGAAGAAATTCTGTCTCCAAACTGCCTTTGGATTCAAGTTGTAAAACTAACTCTTCCCTGTATCTTCAGCCTACCTGCTTGCACTGAACAATTCAGAGATACAGATATAGATATAGATACAGATACGGATATAGATATGTGTGTCTGTGTGTTTCAAACACATTCATTGGAGCTGAAAAGGCCTGACTGGGAATTCCAGCTTCCTCACTTCTGTGTTCTCAACCAATTAAACTTTATAGATTTCTATTTACTTATTAGTATATACAAGGGAAATAATGGAAATAATTATTTGCATTACTCTGAAAAGTGACATAGTGTTTGCCTGGTTCATTGAGCATTATCACAACTCAGCAAATGCCATTTATTGTGATTAAAAATGTTTCTTCAGTTTTCAGGGTAGTTTTTGGCAGACAAATGCTCCTACAGAGAACAACAGGAAAACCCCATTAAAACATCGTGTATTCCCACCACAAAAAAAAAAAAAAAAAAAAAGATAATTATGTGATGTGACAGATGTGTTAGCTAACCTTAAGGCAGTAACACATTGCAACATATAAATGTGTAAAGTCAATACAT TCONS_00246701 . 5' 311 TCONS_00246701 . 5' 311 EMBV3_30724 GCAGAAGGGATGGGTGATATTTCTTGCTTCTCATGATGCATGTTTCTGTATGTTAATGAC Gene GeneID:617051|H3F3B:XM_002696176:154_cdna Constitutive 0 NULL GeneID:617051 19 GENE H3F3B NULL similar to Histone H3.3B CG8989-PA EMBV3_07250 GGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGAGTGTAAAGG Gene BVV0102_101977 + 1 EMBV3_36419 GK000004.2:116060052-116237838 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00220566 TCONS_00238581 TCONS_00118040 TCONS_00210913 TCONS_00252081 TCONS_00040258 TCONS_00250203 TCONS_00133817 TCONS_00123823 TCONS_00110425 TCONS_00246739 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00132066 TCONS_00174807 TCONS_00232829 TCONS_00022895 TCONS_00174805 TCONS_00170890 TCONS_00023655 TCONS_00206300 TCONS_00171428 TCONS_00174806 TCONS_00188145 TCONS_00091323 TCONS_00118487 TCONS_00125692 TCONS_00002600 TCONS_00248945 TCONS_00031759 TCONS_00000529 TCONS_00103962 30 XLOC_105290 XLOC_133883 XLOC_145248 XLOC_072206 XLOC_129423 XLOC_155022 XLOC_024074 XLOC_153146 XLOC_081223 XLOC_075375 XLOC_066329 XLOC_151107 XLOC_083377 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_013565 XLOC_103679 XLOC_014322 XLOC_124877 XLOC_103815 XLOC_114188 XLOC_056098 XLOC_072644 XLOC_077234 XLOC_000643 XLOC_151888 XLOC_018004 XLOC_000141 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_13440 CTCGGAGGCGGCGGGCGGAGGCGGCGGCGGGTACGAGGAACAGCAAATTCAGGAAAAAGT Variant GeneID:539515|SRRM2:XM_002697930:589_cdna 200^471 1 EMBV3_22831 GeneID:539515 25 GENE SRRM2 NULL serine/arginine repetitive matrix 2 EMBV3_34620 CCTTCTGAGATTTGGGGCCTTGTACAGTTTCTTCTCCTGCTGATTGGCACTACTGGTGTG Gene GeneID:518514|IL1F5:NM_001075775:92_cdna Constitutive 1 NULL GeneID:518514 11 GENE IL1F5 NULL interleukin 1 family, member 5 (delta) EMBV3_20299 CTTTTTTGTCAGTGAAGAGAACCTCAGCACGCAGATGGAGTGGCCCCAGTCTTCAAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34148 TGAGCAGGAGCTGCTGCCTCCAGTGCTGGAGCGTGCTGTGGACCTGCTCCTGGGCCACAT Gene GeneID:505680|PTRH1:XM_002691627:308_cdna Constitutive 0 NULL GeneID:505680 11 GENE PTRH1 NULL peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) EMBV3_16113 TGCGTCTTCTTCGACGAGGCCAACAAGCAGAATGGAGGACAAAGGAGAAGTGAAGTGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38157 GCTGGGGGCCCGCACGGACCCTGTGCCTGACACAACAGATTTGTCCTGGACTGCAAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37388 TGGATGACAAGGAGCCTCAGTCAGTGCCAAACATCGAGTACCTCCTGCCTAACATTGGCA Gene GeneID:523030|ARHGAP23:XM_002695947:383_cdna Constitutive 0 NULL GeneID:523030 19 GENE ARHGAP23 NULL Rho GTPase activating protein 23 EMBV3_19820 GGGTATTTCCATGTTTTAAGCTCTGGCCTGCTCATTATCATGGGGGCAGTTTTAATTCTG Gene GeneID:615885|GABRG1:NM_001101250:29_cdna Constitutive 0 NULL GeneID:615885 6 GENE GABRG1 NULL gamma-aminobutyric acid (GABA) A receptor, gamma 1 EMBV3_38207 CCCTATTTCCTCCTCTTTTGTTTGGGTTGGTGGGCATTTATCATGTTGCTTTACCTGCTG Gene BVV0102_072970 - 1 EMBV3_30158 GK000012.2:76587391-76639695 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19020 TTCTTCACGGGGATCTATGGTCGGGAAATGTGGCAGAGGATGACAGCGGGCCCATTATTT Gene GeneID:539709|FN3K:NM_001076182:126_cdna Constitutive 0 NULL GeneID:539709 19 GENE FN3K MGC143024 fructosamine 3 kinase EMBV3_35243 CTACTCATCATCACATCCTATGCTCAAATTGTGTCCTCCACCCTCAAGGTCCCTTCTGCC Gene GeneID:613990|LOC613990:XM_002695750:198_cdna Constitutive 0 NULL GeneID:613990 19 GENE LOC613990 NULL similar to DTMT EMBV3_24052 GGTACCTCCAGCATCTCAACAAAGCTCCTCAATTCCTCCTAAAGGGCTCAATGTCAGACC Gene GeneID:509509|LOC509509:XM_002683714:2_cdna Constitutive 0 NULL GeneID:509509 10 GENE LOC509509 NULL similar to LOC784904 protein EMBV3_13334 AGTGAGTTACTTGGGCAGCACCAGCACCGGGTGTTTGGAACTTAACGGTGAGGGAATATC Gene GeneID:786759|TRIP11:XM_002696752:398_cdna UTR3_Alt 2 NULL GeneID:786759 21 GENE TRIP11 NULL thyroid hormone receptor interactor 11 EMBV3_03899 TGAAAGGAGCTCCAAAGAGCTTGGCCTCAGAGGCCCTTAGTTCAGTCCTGGCAGACACTC Gene BVV0102_333802 - 1 EMBV3_10485 GK000015.2:45866756-45880614 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00064767 1 XLOC_039491 NonCoding TCONS_00064767 XLOC_039491 NonCoding NonCoding - 15:45868244-45868685 - TSS48510 441 1 TCONS_00064767_1 95 0.478458049886621 1 0 0 0 0 0 0.000128747241838413 0 0 0 0 0 0 0 0 0 1.11251934371548e-05 0 0 0 0.000471558115159165 0 6.88374337769926e-06 0 0 0 0 3.19521823464797e-05 5.31442611595705e-05 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 4e-52 208 81.90 0.494331065759637 0 noncoding 0 0 0 0 0.00201108113121591 0.991321818809484 0.0574722040342341 0.255736711829526 ACAACTGAAGAGACTTAGCAGTAACAGCAGCATACATTCAATACTAGAGGCTTTCCAGAGGGCACAGTGGTAAAGAATCTGCCTGCCAATCCAGGAAATGAAAGAGATGCGGGTTCGATCCCTGGTTGGGAGCATCCCCTGGAGTAGAAAATGGCAGCTCACTCCAGTAATTTTGCCTGGGAAACTCTATGGACAGAGGAGCCTGATGGGCTACAGTCCATGGGGCCATAAAGAGTTAGACAAGACTGAGCATGGATGCACACACATATATTCAACACTAATGGCATGTGGAGGATTACTGGAGACTCAGAACGAAGCAAGAGGCCTTATTGTACTATGTGTCCTTGGGCTGCTTCCAGGGCTGCCCTTGTCCACATGCCTCTGAAAGGAGCTCCAAAGAGCTTGGCCTCAGAGGCCCTTAGTTCAGTCCTGGCAGACACT TCONS_00061448 . 5' 1426 TCONS_00061448 . 5' 1426 EMBV3_18006 ACAGTTTATGCCTGACCCCAAGCTCATGGATCACGGGCAGTCCCATCCAGAAGATATAGA Gene GeneID:506138|APOL:NM_001035031:18_cdna Constitutive 0 NULL GeneID:506138 X GENE APOL APOOL MGC128446 apolipoprotein O-like EMBV3_11726 ATCGACAAAGCTGCCTTCTGGGTTGGAGAGCCTATGTGAAGAAGAGCTGCTTGTGGGCGG Variant GeneID:514370|TMEM180:NM_001014925:132_cdna 363^898 1 EMBV3_01210 GeneID:514370 26 GENE TMEM180 C10orf77 MGC139733 transmembrane protein 180 EMBV3_25263 CACCGCGTATAAGAAGTACAACAACCGGTGTCTGGATGGGCAACCAATGAAGTGCAACCT Gene GeneID:512693|POLDIP3:NM_001103183:165_cdna UTR3_Alt 3 NULL GeneID:512693 5 GENE POLDIP3 NULL polymerase (DNA-directed), delta interacting protein 3 EMBV3_05927 GGTCCTGGCACCTTGTCCATGGTAAATGCTGGCCCCAACACAAACAGTTCCCAGTTTTTC Gene GeneID:784679|LOC784679:XM_002685454:88_cdna Constitutive 0 NULL GeneID:784679 2 GENE LOC784679 NULL similar to peptidylprolyl isomerase A-like EMBV3_06613 CTGTGACTGCCTTAGAGGTTCGAGAGAGGTGTGTTGCGGAAAGTCAACTGATGGTCCACA Gene GeneID:510201|STRAP:NM_001015567:32_cdna UTR3_Alt 3 NULL GeneID:510201 5 GENE STRAP NULL serine/threonine kinase receptor associated protein EMBV3_43152 GTCATGTCCGGAGATGGGCTGATCCACGAGGTACGAGCAGGTGACTAAGGAAGACCTCCT Variant GeneID:618605|SPHK1:XM_002696204:243_cdna 664^779 1 EMBV3_01164 GeneID:618605 19 GENE SPHK1 NULL sphingosine kinase 1 EMBV3_27674 CATGCCGGCCCTGATGTTATCGTTGCTGATTGACTTATTCCTTCCTGCACCTAATATACT Gene BVT0102_166278 - 0 NULL GK000008.2:22608438-22633375 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227081 TCONS_00227080 TCONS_00227079 1 XLOC_138148 Coding TCONS_00227079 XLOC_138148 Coding Coding - 8:22620771-22622771 - TSS169603 2000 3 TCONS_00227079_4 73 0.219 1 0 0 0 0 2.03801617231012e-13 0 0 0 0 0 1.23434648718665e-05 1.07659672232889e-05 4.17164638891759e-06 1.57205513099403e-11 2.58940087634465e-21 0 0.00199482824359605 0.000518129014476806 0.000402480606817483 0 0 3.59995125346291e-19 0.000947397356867051 0.000329148217557697 0.000516037682126795 0 0 0 0.000251998499899382 0.000107241776797157 0.000133128942570845 NM_001015511.3 IFNT2 Bos taurus interferon tau (IFNT2), mRNA. 0.0 1357 84.46 0.6175 NM_002177.1 IFNW1 Homo sapiens interferon, omega 1 (IFNW1), mRNA. 7e-127 459 70.59 0.537 TCONS_00227079_3 sp|P07352|IFNW1_BOVIN IFNW1_BOVIN Interferon omega-1; 4e-22 86.3 83.02 0.981132075471698 1 noncoding 0 0 0 0 -0.101592342506938 0.568360845597807 0.0144467818448395 0.853681785894332 ATTCAGAAGACAGTATCTCAAGTCACCCTGAGGGAATTGCTCCAAGGAGCTGAGGGGAAGAGACAGGTTATAGAGGGGTTTGCAAGAAAGGGGAGGTAGTCTGAACATCAAAGTAGTTTTGTGAATTAAAGAAAACCAGCTATCTCAAGTTAAGGAATTTAGCACTTTTCCTTTGTATGGGAGGAGGCAAGTGTCTGGGCTCACTGACAACATTCCTTTCCTGAATCTCAGCTCTTCTGGGGCATCTTTCCTTGCATTTTCTTGCATCTTGCATTTTTTCACTTCCTGAGTTGCCTTGGGCTCACCTTAGGGAGTAGCTGCAATTTGGTAGCTGTCAGCCCACAGGTGTATTCCCCCTTCCTGAGCGCCCTGGAGGGCTGGAAACTCTTGAGGACTGTGTCATCCTAGTTTACTGATATGGCAGGAGATACTCCACTCCTCAAGATCTTGTGGCCCCAGTGAAATGTAATCTCAGGAACCTGAATGAATGTTCTCAAAAGAACAGAACAACTGAGTAGTTCATTCACTCTTAATTACAAGCCTCTGCTCTGTGAAACAGAAAACAAACTACAGAAACCAATATGGCCTGAGTGACTCTGAATTCCTATGAGTAAGATAAGGGGGGAAAAATGCTCTTAAGAATCAAGGAAAAATTTTGTTTTGACATAGCACGAACAAAAGGAATGTTTATATATATTATACTTAAATGTATACATAAGTATGTATACCTCTATAAGTCTTTACATACTTACATAATTTCAGCCTTTCTTTAATTTCTCATTTAACTGATATACATTTGCTTTGACAAATCCAAACTTTATTGGGAAAATTAACCTTCTACCATAAAAATTAAGAGTTTAGATTTTCTAGGTCAAATAGAAAATATTCTAAATGAAAACACACAGGGCAAGTGAGACAGAAATTTAAGACAATGAGTACTGTCTTCCCTACTTAAAAGCCTTGCTTAGAAAGATTATCATCAGACACCCTACCTCCAAGGTTGCACCAGACGCCATCTCAGCCAGCTGAGCAGCAGCCTCATCTTCCCCATGGATTTCGTGCTCTCTCTACTGATGGCCCTGGTGCTGGTCAGCTACAGCCCGGGAGGATCTCTGGGCTGTGATCTGTCTCAGAACCACGTGCTTGTTGGCAGGCAGAACCTCAGCCTCCTGGCCCGAATGAGCAGACTCTCCCCTCACTCCTGTCTGTAGGACAGAAAAGGCTTCGGTTTTCCCCAGCAGATGGTGGAGGGTGACCAGCTCCAGGAGGCCCAGGCCATTTCTGTGCTCCACGAGATGCTCCAGCAGAGCTTCAACCTCTTCCACACAGAGTGCTCATCTGCTGCCTGGAACGCCACCCTCCTCGAGCAGCTCCGCTTGGACTCCAACAGCAACTGGATGACCTTAACGCCTGCCTGGGTCAGGTGGTGGCACAGGAAGACTACTCTGCCCTGGGAAGGATAAGCCTCACTCTGCCCTTGAAGAGGTACCTCCACGGAATCCATGTCTACCTGAAAGAGAAAGATACAGTGACTGCACCTGGGAAATCGTCAAGAGTGGAGATGATGGAGCCCTCACTTCATCAAGCAGCTTGTAAAAGAGGTTAAGAAAGATGGATGGAGATCTCAACTCCGCTTGAGATGACTCTCACCGACAAAGATGCAACATCACCCTCGTACACTCACCTGTGTTCATTTCAGTCGACTGATTTCTGCTTTAGCCACCAAATTCATTGTATTACTTTAGCCAATACTTTGTCAGTAGTAATAAAAAGTAGATATAAAAGTATTTAGCTGTAGGGGCATGAGTCCTAAAGTCATGCCGGCCCTGATGTTATCGTTGCTGATTGACTTATTCCTTCCTGCACCTAATATACTTAAAATATTTCTAAAATTACAATTCCTCTATACATCATATTAAAATTTCTAAAACATGTTTACCATTTCATGTTATTAATTTGGTACTTTGTTCTATTTATTAAATTCTTATGAAAGAAAATGA TCONS_00227086 s 3' 10174 TCONS_00227086 s 3' 10174 EMBV3_20966 GAGCAGGACTGGAGGGACGTCTGTTGGTTTTCACACACAACCCCTCCTCATTCTCTTCCT Gene GeneID:618005|GPC2:XM_002698211:781_cdna Constitutive 0 NULL GeneID:618005 25 GENE GPC2 NULL glypican 2 EMBV3_30567 CGAGATCTGGACAGAAGGTTTCCAACATATTTGATGATCCCTTGAATGCCTTTGGAGGCC Gene GeneID:513740|LOC513740:XM_002698974:135_cdna Constitutive 0 NULL GeneID:513740 28 GENE LOC513740 NULL hypothetical LOC513740 EMBV3_35526 GAGAACCATAGAAATTTGGCCCACAGAAACCAATAGGGATAAGATTGGGAGAGAAGTTGC Gene GeneID:505775|SLC16A1:NM_001037319:62_cdna UTR3_Alt 2 NULL GeneID:505775 3 GENE SLC16A1 MCT1 MGC128991 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) EMBV3_10727 ATGCATGACTCTGACCTGAGAAGAACAACCAATATCAAGGAGGTCCTGCCAAATGCCTCT Gene GeneID:784501|LOC784501:XM_002707795:83_cdna Constitutive 0 NULL GeneID:784501 29 GENE LOC784501 NULL similar to glycerophosphodiester phosphodiesterase domain containing 4 EMBV3_14856 TCCCCCAGGAATCCAATACTTCTGAGGAGGGCCAGGAGAAGGCTGAGGAAACTAAGAACT Gene GeneID:785738|BSP30D:XM_002692296:1675_cdna Constitutive 0 NULL GeneID:785738 13 GENE BSP30D NULL common salivary protein BSP30 form d EMBV3_40022 AAGCACCACCTCTGTAGATAAAACAGATGGAGAGCTGTTCCCTTAGTGGCTGGCAGAGCT Gene GeneID:282713|NFKBIZ:NM_174726:5_cdna Constitutive 0 NULL GeneID:282713 1 GENE NFKBIZ MAIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta EMBV3_32853 CTGTCATTGCTTCCACTGTTTCCCCATCTTTTGGCCAGGAAGTGATGGGACTAGATGTCG Gene BVT0101_024957 + 1 EMBV3_00994 GK000002.2:9030991-9502290 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104438 1 XLOC_062379 Coding TCONS_00104438 XLOC_062379 Coding Coding - 2:9401898-9434885 - TSS77329 1736 2 TCONS_00104438_6 140 0.796658986175115 3 0.947462559873886 4.70243337712116e-05 0 0.000106612978610923 4.78349623767793e-05 0.000452196125680487 0 0.000122613971786409 5.79206299566171e-05 0 0 0 0 0 0 0 0 0 0 0.000479163420984373 2.07126411317409e-05 0.000352798694249517 0 0 0 0 2.43506113148046e-05 4.05010736958579e-05 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 964 79.02 0.625576036866359 1 coding 0 0 0 0 -0.357560973555153 0.162439721722154 0.00675994989792807 0.89554859729176 GCAGATGCAGAACATGTGAAGCTGAGGAATGCGGAGAGAGCCTGGCATTGGGAACAATCAGAACTGTTTAGAACTGTTGTAGAGTAGAATGTTTTCTGGTGTGGAATGTGGGGCATGGCAGGAGTCAGATAGGCAGGCTGGTAGAAAGCTTCTATATGTCTCTAGCTATGTTGGGTTTTTACTGATAAAGGAGTTATCAAGTTCCAGGACCAAATCCTGCTGAAAGTAACTGCAGATACAAACCGAAGCTGGCAAATTCCCAGAGGCATGTGGGATCTTAGCTCCCCGACCAGGATGAAACCTGAACCCCTTGCACTGGAAGGTGAAGTCTTGACCACTGGACCATCAAAGAAGACAACAAATGGCATATGAACAGGTGGTGCAGTGATAAAGAATGCACTTGCCAATGCAGGAGACTCGGGAAACAAGGGAAAATGCAAGGAAATTCCAGAGAAATATCTACTCCTGCATCATTGACTATGCTAAAGCCTTTGTGTGTGACTGTGTGTGTCACAATAAACTGTGGAAAATTCTTAAAAAGATGGGAATATTAGACAACCTTACCTGCCCCCTGAGAAACCTGCATGCAGATCAAGAAGCAACAGAACCAGACATGGAACAACAGACTGGTTCCAAATGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTCTATGCAAAGTACATCATGCAAAATGCTGGGCAGGATGAATCGCAAGCTGGAATCAAGATTGCCCGGAGAAATACCACAACCCCAGATATGCAGATACAACTCTAATGGCAGAAAGTGAAGAACAATTAATGAGCCTCTTGATAAAGATGAAAGAGGAGAGTGAAAAAGCTGGCTTAAAACTCACCATTCAAAGACTAAAGATCACGACATCTAGTCCCATCACTTCCTGGCCAAAAGATGGGGAAACAGTGGAAGCAATGACAGACTTTATATTCTTGAGCTCCAAAATCACTGCAGACATTGACTGCAACCATGAAATTAAAAGAGACTTGCTCCTTGGAAGAGAAGCTATGAAAAACCTAGACAGGATATTGAAAAGCATAGACATTACTTTGCCAACAAAGGTCAGTATAGTCAAAGCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAACTGGACCATAAAGAAGGGTGGGTGCCAAAGAATTGATGCTTTGAACTGTGGTGTTAGAGAAGACTCTTGAGAGTCCAGTGGACTGCAAGGAGATGAAAACAGTCAATCCTAAATGAAATCAACCCTGAATATTCATTGGAGAAACTGATGATAAAGCTGAAGCTCCAATATTTTGGCTACCTGATGCAAAGGACTGATTCACTGGAAGACTGATGTTGGGAAGGAGTAAGAGCAAGAGGAAGAGGGACTGACAGAGGATGAGATGGTTGGATGACAGCACCAATTCAATGAACATGATTATGAGCAAATCTGGGAGATAGTGAAGAACAAGAAGCTGCAGTCCATGGGGTTGCAAAGAGTCAGACACAACTTAGAGACTAAACAACAACAACATGAGACATGGGTTCGATCCCTGGGTCAGGAAGATCCCATGGAGGAAATGATAACCCATCCCAATATTCCTCCCTGGAGAATTTCATGGACAAAGGGTCCTGGCAAAAATTTGGACATGACTGAGCACATGTGTGTGAACATTTCTGAATCTATACCTAAATCTATAACTACATCAACATAAACAAACAATACTTCAAAAAAAATTACAGC TCONS_00101623 r 5' 99033 TCONS_00101623 r 5' 67406 EMBV3_42517 AACTGCAGAAGATACATGCAAATGCTGATGCAGGATGAGGAAGGGTCAGAGAGGAATCTG Variant GeneID:615505|TMEM176B:NM_001099145:721_cdna 727^846 1 EMBV3_42127 GeneID:615505 4 GENE TMEM176B MGC165671 transmembrane protein 176B EMBV3_32520 CGATCGAGCTGCCCCTATTCTCTCCAAAACCAAGAATGGATTGTCTCCTCTTCACATGGC Gene GeneID:100337251|LOC100337251:XM_002698854:72_cdna Constitutive 0 NULL GeneID:100337251 28 GENE LOC100337251 NULL ankyrin 3-like EMBV3_21580 TCTGAACAAGCTAACCAAAATTTGCACTGGTTTCTACAGTTCACTTGTAAGGGTATCCCT Gene GeneID:508613|MGC140754:XM_002686900:90_cdna Constitutive 2 NULL GeneID:508613 4 GENE MGC140754 NULL hypothetical LOC508613 EMBV3_01433 CGCCCAAATTCAGGGACAGCATCAAGCGTTTTTTCTTCTCGCCCACAGGAGCCTTGAAGA Gene GeneID:525286|LOC525286:XM_002694896:947_cdna Constitutive 0 NULL GeneID:525286 18 GENE LOC525286 NULL similar to chemokine-like factor superfamily 1 EMBV3_14789 TGTCCCGCCGGGCTGCGGATTACGGCGACTGACCCCCCACCCAACCTGCCCTACTTCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20501 TTCATGGGAGAAAGGAAGATGGGGAGTGTTGGTGTCATTGATATGGAAGGTTGACTCGAC Gene GeneID:505901|PRKCQ:XM_002692066:1_cdna UTR3_Alt 2 NULL GeneID:505901 13 GENE PRKCQ NULL protein kinase C, theta EMBV3_33985 CTTTCCCGCCCTACGGCCACTACGGGAACACCCTTCGGCTTCCGGACCGCGCCTCCCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02364 ATAAATGCTCACTGTCTCAGACTCTCTTCCAGCGAGGGTGGCTGGGGGACAAAGCTTTGA Gene GeneID:505006|RWDD2B:XM_002684614:90_cdna Constitutive 3 NULL GeneID:505006 1 GENE RWDD2B NULL RWD domain containing 2B EMBV3_41180 AACTGCAGCAAATCAACAGCAGCGATGAGCAAAGGTTACAGAGGGGCTAGAAGCTGTTCC Gene BVT0102_281661 + 0 NULL GK000027.2:12807703-12916139 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00154993 1 XLOC_094614 NonCoding TCONS_00154993 XLOC_094614 NonCoding NonCoding - 27:12883808-12884766 - TSS116070 775 1 TCONS_00154993_1 129 2 0.19226750261233 0.000244172041497119 0.000829806163440383 0.00177737422069354 0.000567896625163512 0.000251033029079189 1.83626502939682e-05 0.000180595416355073 0.00043320118337026 0.00024434015969888 0.00157147373474387 8.86136863167975e-06 0 0 6.06967311391599e-06 0.00022731773444655 0 0 0 0.000221187482449823 8.3513316427488e-05 9.06199928811988e-06 0 0 0 0.000196679335760725 0.001622689741615 0.000400689717249256 2.47875769367865e-05 2.50560551429879e-05 0 0 noncoding 0 0 0 0 -0.0379443162408254 0.75058343832972 0.0612618485577947 0.226639940362046 GAGCCAGAGGGCTTCCTAATGTTGACACTCCTCCCCCCGACCCCGACCATGGGCCAGTGCCGCACCCCATGAAGAGAAGAGCTGGTAGCCCTCGTAGCATCAGCATCCTTGCCAGTAGCGCTCCCAAAAGGAAGACGGCAAAGCTGAGCAAACACGCCCAGTCCAAGCTTCCCAGAGCTGCCAACCAGTGCTGCGGTCCAGGGGCGTCAAAGGCGGAGAGAGGCCGGGAGATTATGGGGACCAAGCTCCCTCAACAAGGAAGGACACATCAGTTGCAGAGGAGACGCGTCCTGCCAACCCAGGCCCGCTCCAGCAAGAACGAAGCTCACCCCGGCTGGTTCCAGGAGGAGACCCAGTGTCCTTGTCACAGCTCCTTTGGGCACCTGAGAATAAGACTGTATTGTGCGTGCCTGACGTTTCTCTTTTTACAAGTGGAACAGCTTCTAGCCCCTCTGTAACCTTTGCTCATCGCTGCTGTTGATTTGCTGCAGTTTTATACTTTATTGCTCTTAAAATTCAGAAAGCAGAGCCCGGCGCGAAGGCCTGTCATGTCGCCTGACCTCCGCCGTGTCTGCTCGGTGACACTGGGTTGCCCCCTGCCCCTCCCGGCCCCTCTGTCAATACTGGCGCGGCGCTGGCCATTTCTTTCTGCCTCTGAGACCCAGTAATCCCCGAGGTTTTGTCAGCTCTGCTGACTCCCACCTGGATATGCATAAAATACCTTGTATTCAGCCCTTAGAAGCATGTTATCCATGTTATTACTCAAAGACACCTT TCONS_00155906 TCONS_00155907 TCONS_00155908 TCONS_00155909 r 3' 31374 TCONS_00155906 TCONS_00155907 TCONS_00155908 TCONS_00155909 r 3' 32331 EMBV3_03136 GTATCCATTCCTCCCCCAAACCCTGCACCCATTCAGGATGCTGCATAACATTGAACAGAG Gene BVT0102_192823 + 0 NULL GK000014.2:63632910-63748513 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40309 GTCTTTCATATTTTCAGTCTTTAATGAAGTATTTCATACCTGCAAAAATACACAATCATG Gene GeneID:535676|PPIL4:XM_002690318:11_cdna Constitutive 2 NULL GeneID:535676 9 GENE PPIL4 NULL peptidylprolyl isomerase (cyclophilin)-like 4 EMBV3_32195 TGGGGGGATGCCTGCTGCACTTGGGAATTTAGACAATGGTTAGCGTCGAGGCAGTTGTAT Gene GeneID:100335666|LOC100335666:XM_002697650:49_cdna Constitutive 0 NULL GeneID:100335666 24 GENE LOC100335666 NULL hypothetical protein LOC100335666 EMBV3_19636 TGTCTAGAGGTGCTGTAGGAACCATAGATCCAGCCAGGGGCTTCCCTAAGGCAGTGCAGA Gene GeneID:506557|PB1:XM_002697017:430_cdna UTR3_Alt 2 NULL GeneID:506557 22 GENE PB1 NULL polybromo 1 EMBV3_27470 CCTGCACTGCCTTGTTTGACCCTGACGGTCTTTGGTCCCATTTTACAGATGAGAAGACTG Gene BVV0102_182486 + 0 NULL GK000003.2:109667305-109780600 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17958 AACGTCCACCTGGTGTGTGAGGAGACAGCCAACTACCTGGTCATCTGGTGCATTGACCTA Gene GeneID:520883|CDC37:NM_001035338:56_cdna Constitutive 0 NULL GeneID:520883 7 GENE CDC37 MGC127139 cell division cycle 37 homolog (S. cerevisiae) EMBV3_05795 CACTCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAAGCAAAACACCCC Gene BVT0102_010251 + 0 NULL GK000014.2:51234078-52949755 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00207277 TCONS_00214738 TCONS_00249013 TCONS_00185686 TCONS_00115729 TCONS_00030974 TCONS_00230468 TCONS_00220662 TCONS_00187806 TCONS_00040555 TCONS_00252354 TCONS_00091329 TCONS_00189889 TCONS_00250931 TCONS_00210523 TCONS_00244654 TCONS_00187583 TCONS_00091802 TCONS_00231021 TCONS_00190337 TCONS_00170310 TCONS_00250580 TCONS_00152647 TCONS_00056970 TCONS_00230725 TCONS_00148670 TCONS_00062742 TCONS_00165812 TCONS_00250544 TCONS_00117462 TCONS_00175821 TCONS_00232966 TCONS_00245928 TCONS_00141532 TCONS_00249881 TCONS_00064058 TCONS_00238893 TCONS_00251214 TCONS_00244651 TCONS_00040697 TCONS_00238308 TCONS_00199627 TCONS_00207366 TCONS_00160965 TCONS_00152860 TCONS_00022065 TCONS_00032588 TCONS_00251916 TCONS_00020016 TCONS_00210648 TCONS_00239374 TCONS_00232347 TCONS_00108588 TCONS_00210178 TCONS_00251452 TCONS_00160991 TCONS_00201770 TCONS_00129415 TCONS_00244653 TCONS_00253720 TCONS_00207754 TCONS_00135548 TCONS_00056147 TCONS_00021194 TCONS_00189353 TCONS_00019991 TCONS_00185880 TCONS_00229354 TCONS_00175849 TCONS_00224114 TCONS_00036946 TCONS_00008834 TCONS_00020022 TCONS_00037883 TCONS_00048821 TCONS_00198661 77 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_125795 XLOC_130757 XLOC_151956 XLOC_111739 XLOC_069898 XLOC_017223 XLOC_139958 XLOC_133979 XLOC_113849 XLOC_024371 XLOC_155295 XLOC_056104 XLOC_115926 XLOC_153874 XLOC_129033 XLOC_150512 XLOC_113628 XLOC_056573 XLOC_140510 XLOC_116372 XLOC_103556 XLOC_153523 XLOC_092412 XLOC_034773 XLOC_140215 XLOC_090550 XLOC_037469 XLOC_100652 XLOC_153487 XLOC_071628 XLOC_105600 XLOC_142448 XLOC_150855 XLOC_085960 XLOC_152824 XLOC_038784 XLOC_145559 XLOC_154157 XLOC_024513 XLOC_144975 XLOC_121280 XLOC_125883 XLOC_097858 XLOC_092625 XLOC_012736 XLOC_018828 XLOC_154857 XLOC_010694 XLOC_129158 XLOC_146040 XLOC_141832 XLOC_064493 XLOC_128688 XLOC_154393 XLOC_097884 XLOC_123415 XLOC_078128 XLOC_156659 XLOC_126269 XLOC_081771 XLOC_033950 XLOC_011867 XLOC_115392 XLOC_010669 XLOC_111933 XLOC_138849 XLOC_105628 XLOC_137410 XLOC_021259 XLOC_004391 XLOC_010700 XLOC_021712 XLOC_028952 XLOC_120315 Coding TCONS_00229354 XLOC_138849 NonCoding NonCoding - 8:2557529-2558613 - TSS170858 1084 1 TCONS_00229354_2 118 0.997232472324723 1 0 2.51027591171023e-06 0 2.13423121305016e-06 0 0 0 1.84450574633871e-06 0 0 6.46362951175192e-05 3.99413746252622e-05 1.55532181485613e-05 1.35645042964244e-05 0.00014489275163546 5.78133364332646e-06 0.002164817523245 0.00318171808389475 0.00462562329167112 0 3.31707035394452e-06 0 0.00320644011591593 0.00184796150768437 0.00222080368255703 0 6.49950411920376e-07 0 0.000293836862500732 0.00101979446118106 0.000306281287184322 XR_229156.1 LOC101907943 PREDICTED: Bos taurus uncharacterized LOC101907943 (LOC101907943), 2e-79 300 80.47 0.310885608856089 0 noncoding 0 0 0 0 0.044186773713356 0.68151882467206 -0.00421894400467007 0.937197478317913 GGGGTGTTTCACCTTGGGTTTATCCTGTCTGGGACTCTCTGGGTTTCTTGGACTTGGGTGGCTATTTCCTTCCCCATTTTAGGAAAGTTTTCAACTATTATCTCCTAAAGTATTTTCTCATGCCCTTTGTTTTTGTCTTCTTATTCTGGGACTCCTATGATTCAAACATTGGGGCCTTTAACATTGTCCCAGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCCTTTTTCTTCTTTCCTCTCTGCTTCACTTACTTTCATCATTCTATCTTTCACATCACTTATCCTATCTTCTGCCTCAGTTATTCTACTATTGGTTCTGAAAGGTTGTTGTTGAATCACGCGAAGACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGCGGCAGAAAGAGTACCCGCCTGCTAGTCTTCAGCTGGATGTTATATAGTCACTAGTAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGAATGGCACCAGGCCCCTCACTCATAAGATGCATTTTGGGATAGTCTTGGCGCCAAATGGTTTATCCTGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGACAGATCACCATACAAATAGTTTCATTTACATAGATTAGGAGAACAATATCCATACTGGTTTGTCAAGTAGGTTCTGGGCCAAGAGGCGGAACCAACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAAAAAGGCATTGGTTATCTCTAGGCTCAAGAATAGCTAACTTCAGGCGAAACCAGGTGTCATTATGGCCACACAGTATTTTAAGAGAAACCTCCCTTTAAATTTGTATAGAGAAGGAAAAAATATTGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGGCTATTTCCTCCATTTGGAGACCCCTGGCCTTCCTGCCTGTTACCCTCTCA TCONS_00226773 . 5' 692321 TCONS_00226773 . 5' 692321 EMBV3_03032 AACTGTTGGAACCTCCGACCAAACTGGGTACAGCCTTGAAACTGCTGGCATGGATCCCTT Gene BVT0102_040273 - 1 EMBV3_18633 GK000012.2:68741354-69494591 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035528 TCONS_00037161 2 XLOC_020930 XLOC_021315 Coding TCONS_00037161 XLOC_021315 NonCoding NonCoding - 12:68777213-68778080 - TSS26872 795 1 TCONS_00037161_1 69 0.226415094339623 2 0.0842956120092379 2.66900037401741e-11 1.99369814976225e-117 6.63987043331512e-34 2.89642404773874e-15 0.000395238333456332 7.76840096112557e-45 1.45545536252889e-05 2.41966384550097e-26 3.48259166008048e-05 1.68131956696468e-280 0 0 1.96051466610309e-305 0 0 0 0 0 0.000861570559170251 0 3.81117666857155e-05 0 0 0 0.000136364842386351 0.000351318251284983 6.03219550100573e-05 0 0 0 XM_005218456.1 HAS3 PREDICTED: Bos taurus hyaluronan synthase 3 (HAS3), transcript 8e-39 165 73.90 0.366037735849057 0 noncoding CTGAAAGCCATGCACGCTACCTGGCTGCAAGGGATCCATGCCAGCAGTTTCAAGGCTGTACCCGGTTTGGTCGGAGGTTCCAACAGTTTCCTCCCACGTGATGAGGGCAGGCGCTTATTGCAGAGGGGCCTAGGAGAGTCCAGGCTCCGTCTCACTGCCTTGAAAAACATACTTGATGAGGAGGAGCGTGAAAAGGTCATCTTGAAGAAAGCAAACTGAGGGGGCTGAGACTCAGCTAAATTTGAGAGAGGAAGTCAGGAGAATACAGCTTGAAACACTCAGGCCCTCATTTGTTTCTGTGATTAGGATTATCCTTCCTGTTGCTCTTACTGTTGTTATTGTTGCTGAGTAGCTAAGTCGTGTCCGACTCCTTCGCCAACCCAATGACTGTGGCCCATCAGACTCCTCTGTCCATGGGATTCTCCAGGCAAAAATACTGGAGTGGGTTGTCATTTCCTTCCTTCCCATCCAGGGATTGAACCCATGTCTTCTGCTCATTATTTACCACTGAGCCACCAGGGAAGCCCTTACCTTCTTGGGAGATGGCCAAAACATTTTACCTCCACAGAAGTGATCACACAAGCATGAATCGACGTGCCTAAGCAATATCCAGGTTGAATACCTTCTGCCCAAGGCCTGAGACAGCCACGGCCTTCAGCACCATCACCAAAGTGCTCTCCTCCTGGCCCCTCTTCATCTCAAACATCTGCTCTTACTTTTTGAAGAATGTCTTCAGGATCTTCTAAGGTGGCTGATCAATCAAGAAACTAGGGCTAATTTTCAAAGACAGCACTG TCONS_00035522 r 3' 35861 TCONS_00035522 r 3' 35908 EMBV3_27234 CTTGGGGATGGTCTTGCTCCCTGTCTCCTATACAATGTCACAAACCTCTGTCCATAGTTC Gene BVT0102_002636 + 1 EMBV3_39097 GK000007.2:75539457-75703750 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178770 TCONS_00017658 TCONS_00252153 TCONS_00066197 TCONS_00188712 TCONS_00031400 TCONS_00167835 TCONS_00009350 TCONS_00188878 TCONS_00099336 TCONS_00131937 TCONS_00198269 TCONS_00021541 TCONS_00208722 TCONS_00047887 TCONS_00038157 TCONS_00254205 TCONS_00039511 TCONS_00209797 TCONS_00057947 TCONS_00231294 TCONS_00185761 TCONS_00106693 TCONS_00170142 TCONS_00141164 TCONS_00123871 TCONS_00111187 TCONS_00156644 TCONS_00050906 29 XLOC_108543 XLOC_009078 XLOC_155094 XLOC_040914 XLOC_114753 XLOC_017648 XLOC_102671 XLOC_004906 XLOC_114919 XLOC_059579 XLOC_080642 XLOC_119926 XLOC_012214 XLOC_127234 XLOC_028019 XLOC_021983 XLOC_157139 XLOC_023328 XLOC_128308 XLOC_035744 XLOC_140783 XLOC_111814 XLOC_062871 XLOC_103517 XLOC_085592 XLOC_075423 XLOC_067087 XLOC_095104 XLOC_031026 Coding TCONS_00066197 XLOC_040914 Coding Coding - 15:79122705-79126065 - TSS49940 3360 1 TCONS_00066197_4 349 0.890773809523809 1 0 0.000911153571227853 0.000396660595781436 0.000808550708571659 0.000365669252733443 0.000460583426380235 0.000148009451597228 0.00033733937740547 0.000251976791589605 0.000381728282766778 9.79639190752363e-06 3.37529560572635e-06 6.38515326597364e-06 2.29805308375844e-06 0.000155605029451023 9.34135482616659e-06 0.000401484147846331 4.82777637654535e-05 0.000183641428583496 0.000603485779049651 0.00065904508928035 0.000225504961841281 0.0002149198492707 0.000107914220043369 0.000342435539939148 0.000403211440868158 0.000207167338496405 0.000243464843346009 3.57313841942007e-05 4.26976801010356e-06 4.45401595401468e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 2241 91.61 0.462202380952381 TCONS_00066197_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-21 97.4 22.96 0.97134670487106 1 coding TGTTTTTGTTTTTTTTTTTCAGTTTTGCCAAGAAAATGCACTGGTCATAGCAAACACCCTCTTCCAACAATACACGTGGACATCATCAGATGATCAACACCAAAATCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAACAAAAACAGGACCAGGAGCTGACTATGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTGAAGAAAATAGGGAAAACCAATAGACCATTCAGGTATGACCTTAATCAAATCCCTTATGATTATACAGTGGAAGTGAGAAATAGATTTAAGGGCCTAGATCTGATAGATAGAGTGCCTGATGAACTATGGACTGAGGTTTGTGACATTGTACAGGAGACAGGGATCAAGACCATCCCCATGGAAAAGAAATGCAAAAAAGCAAGATGGCTGTCTGGGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGCGAAAAGCAAAGGAGAAAAGGAAAGATATAAGCATCTGAATGTAGAGTTCCAAAGAATAGCAAGGAAAGCTAAGAAAGCCTTCCTCAGCGATCAATGCAAAGAAATAGAGGAAAACAACAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCTCGATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAAAGATCTTCATGACCCAGATAATCACGATGGTGTGATCACTCATCTAGAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGAAAATTTGGAAACCTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGCTCAAACTACCGTACAATTGCACTCATCTCACATGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGAAATACGTGAACCTTGAACTTCATGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAAATCAAATAGCTAACATCCACAGGATCATCGAAAAAGCAAGAGAGTTCCAGAAAACCATCTATTTCTGCTTTATTGACTATGCCAAAACCTTTGACTGTGTGGATCACAATAAACTGTGGAAAATTCTGACAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCTGTATGCAGATGAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGCTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAATCACTGGACTGGAAGAAGCACAAGCTGGAATCAAGATTGCTTGGAGAAATATCAATAAGCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTCAAAAGCCTCTTGAGGAAAGTGAAAAAGTTGGCTTAAAGCTCAACATCCAGAAAACAAAGATCATGCCATCTGGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTTCTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGGAAGGTTATGACCAATCTAGATAGCACATTCAAAAGCAAGACATTACTTTGCTAACAAAGGTTCGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTTTGGATGTGAGAGTTGGACTGTGAAGAAGGCTGAGTGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGACACTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGGGAAGAGTTGACTCATTGGAAAAGACTGTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCAATGGACATGAGTTTGAGTGAACTCCGGGAGTTGGTGATGGACAGAGAAGCCTGGTGTGCTGCGATTCATGGGGTCGCAAAGAGTCAGAGACAACTGAGTGACTGAACTGAACTGAACTGAATTGCTTTACAATGTTGCATTGGTTTCTGCCATGCTGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGGGACCTCATAGACAGCAGCCCACCAGACTTCCCCGTCCCTGGGATTCTCCAGGCAGGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAAGGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCTAGCGACCCCATGGCCTGCAGCCCACCAGGCTCCTCCGTCCATAGGGATTGTCCAGGCAAGAGTACTGAAGTGGGTTGCCACTGCCTTCTCTGGGTTTCTGCCATACAATAATGCAAATCAGCCATAAGTGTATAGATATATATCCCCTTCCTCTTAGGCTTCCCGCCCACCCCCTGCCCCCATCCCATTCGTCTAGGTCATCACAGAGCATCGCTGGGCTGAACGACCACCACAGAGCAGCTTTCCCTAGCTATTTTACACACTCTTTTGCAACATAAAGGGTAATGGTTAATTCAGGGTTTTCACTCTCAAAAGCACTTGCATTAAAGTCTTTAAAATGATGTTAAAATGTATAATATTTTCTCCTTAATCATTAGTTAAAACTTGGCATCTCATTAGAACTTTAATCAGCGTTGAATTAATGACATCCTGAATAGCACTGGTCTAGAGCACACTGAGCTTTCAAAGTGCCATTGTGGCACTGGTGAAAGCTTTCACTACAAAAATTTTAATACATATTCGGGTGTGGTCAAGACAGATTAATATAATCACATGTAACCAAAATCCAGCTTGAATAAATACTGCTTTGGACAAATTTTGTTTCCTCTTGAGCAGGGTATCTCAATAGCAGTAGTATTGTTGCTCTGGACTCAGGTAACCTTTGCTGTGGGGGGCTGTCCTGTGCATTGTAAGATACTGCTCAGAATCTCTGGCCTCTTCTCACGAGTTGCTAGCAGCATGTCCTCTCCACCCAGATTGGGATGATAAAAAATGTCTCCAGATATTGGGGGACAAAAACTACCCATGATTCAAAACCA TCONS_00060199 . 3' 4688 TCONS_00060199 . 3' 8047 EMBV3_00726 CTGTCAAATTGCAAGGGCAAGGACCAAGGGGCTGATACACCTGGTTAGGAACGACAGTCA Gene BVV0102_089789 + 1 EMBV3_34117 GK000017.2:54211967-54276965 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077294 TCONS_00077291 TCONS_00077293 TCONS_00077295 TCONS_00077296 TCONS_00077292 TCONS_00077290 1 XLOC_047040 Coding TCONS_00077291 XLOC_047040 Coding Coding LOC100847961 17:54245605-54274441 j TSS57819 2451 1 TCONS_00077291_3 653 17 0.915588694295127 2.68030169869922e-37 3.00189052868337e-11 0.000607139399108369 3.0337761897518e-16 8.63015315736943e-43 6.17632949436229e-14 1.14500353334234e-08 3.36980648748693e-20 1.33180205357273e-06 2.22041324822802e-34 2.07466730583587e-17 2.05618999414794e-05 0 1.97832416625464e-16 4.99590792974964e-40 1.90834346041659e-11 8.39603047019809e-15 1.16313489567317e-17 9.94291211759098e-17 1.00572030453847e-06 4.04705269307317e-14 1.87823236701418e-05 4.20602857907009e-47 8.98971468478562e-26 0.00028675445042051 0.00033624223965881 5.54263283627427e-05 2.54703054697205e-07 9.12939628399578e-26 2.33293640115929e-47 XM_003583306.2 TCTN2 PREDICTED: Bos taurus tectonic family member 2 (TCTN2), transcript 0.0 3456 100.00 0.781313749490004 NM_024809.4 TCTN2 Homo sapiens tectonic family member 2 (TCTN2), transcript variant 0.0 1956 82.60 0.781313749490004 TCONS_00077291_3 sp|Q96GX1|TECT2_HUMAN TECT2_HUMAN Tectonic-2; 0.0 996 78.16 0.961715160796325 1 coding 1 1 1 1 -0.0698209205447221 0.52562626866944 -0.000233051519658523 0.996585958651285 CTGTTGTGCAGGCCCGGCGAGCCCCCAGGCATGCGTTTGTCGCCGCCGGTCCCTTTGCTTTTGGGACTCCTCCTTCTGCAGGGCGTCTTGAGGCCGCTGAGGGGAGATCTGGTTTTCATTCCTTCTGTCATCCGCATGTCCGGCTCTGTGGTCAGCGCGTCCCTGGTCGGAGGCACCGAGGATGTGACCGTGTCCCTGACACAGCTGCGGGACGAGATGGGTTTATTGCCAGTTCCCACCTGTGGCGAGCTGAACAATGAGACAGGAGACTGGAGTTTGACTGTCACCCCCACTGTGAATTCGTTGGAAGTGACCGTGAGGTTGAAAAGGGATATGCAGTCATGTTCCTCTAATGGGACAGATCCCTTCCTGGAGGCCCCATGTATTGTCCAAGCTCTTCTTGTTTCAGCCTTTCATAATACATCCTGTTTAGCACATCTGCTCATTCATGTGGAAATTTATGCCAACTCCTCTCTGGGCCAAAATGCATCAGAAAATGTGACTGTCGTTCCTAACCAGGTGTATCAGCCCCTTGGTCCTTGCCCTTGCAATTTGACAGCGGGGGCCTGTGACATTCGCTGCTGCTGTGACCAGGAATGCTCATCAGATTTAACAGCACTGTTCAGGGAGTCCTGTTTCCCTGGTGTTTTTGGAGGAGATGTTAATCCTCCCTTTGATCAGCTCTGCTCCATACAGATGTCACATGGAGTCCCCGACTGGTTTCCATTCCTGTGTGTGCAGCTTGCCAACTCACCCTTTCTCGGGTACTTCTACCATGGTTCCATTTCCTCTGGACATCAAGTTTCCTTTGGCATATATTTGCATACTGATCTAAAAGACTTTTCAGATTTTGGTTACAAACAAGGAGACCCCGTTATGACAGTAGATAAGGCATATTTTACTATTCCACAGGTGTCCCTGGCTGGGCAGTGCCTCTACAACGCTCCTGTGGCTTTCCTGCAAAATTTTGATGTTCAGTGCGTTACTAGCCTGGAGGAGTACCTAGAACGAGATGGAATTACCAGTGCAAAGATAAAGAATGGTGCTATGGGAGGCATAGTTACACCGAAAGTAATCTACGAGGAAGCAACTGACTTAGACAGATTCATCACCAATACAGAAACACTTTTAAGTACTGGACCAGCCCCCAGGAATGTGAACGTGGAAGAACATTATATTTTCAGGTGGAATAATAATACAATCAGTGAAATAAACGTCAGAATTATCAGGGCAGAAATTAATGCCCAGCAGAAAGGAATCATGACACAGAGATTTACAGTGAAATTTTTAAGCTATAACAGTGGTAATAAACAGGAATGGTCTGGAAACCCAGGTTACCAACTTGGCAAGCCTGTTCGAGCTCTAAGCACCAACGGGACAAATAATGTCACAACTTTACACCTTTGGTATCCTGCCGGAGGGAGCTTGTGTTCGACAGCAACTCGCAAACCCATTTTATTTGGAGAAAACGTACTATCTGGGTGCCTTTTAGAAGTTGGAATTAATGAAAACTGTACTAAGCTTAGGGAGAATGCTGTTGAACTGCTTGATTCATTAGTACAAGTGACTCATGTTGCAATGAGAGGCAACTCCGATTACAACGATCTCAGTGATGGCTGGCTTGAAATAATACGTGTGGATGCCCTTGGTGCAGGCGCAGACCCACCTGACAGCAACGTGAGTGGCATCTGCCTGGATGTTCCCGCGCAGCTGAACATCCGCATCCTCTTCTCGGATGCTGGTGCCGTGGAAGGGATGACTCAGCAGGAGATACTTGGTGTCGAGACTAGGTTCTCCTCCGTGACCTGGCAGTTCCAGTGTGGACTGACTTGTGAGGACAAGGCTGACCTCTTCCCCATTGGCGCATCGGTCCAGTTTATTAAGATACCCGCACAGTTACCCCATCCCCTTACAAGGAGAGCCTTACTCTCAGTGTGTTGCCAAGAGCTTACTACTGGTATCCTTCATCATTTTAGCTGTATTCCTCAGTAACCCCTGGATCAGAATACACAAAGCTTAGAATTCAACTACCGTCTGACTTCTTACAAATCATCAGCTTCTACGTCAGAGATTTGTTGTCCTCCTGTGTGCCTCTCTGTAAAATCTTAATAAATGAAATGTTTTATTTTTATAGAACATTTTATTAAGTGCTCCACAAATTAAATTCACATGTGTACCTATCCAAACGTTCAAAGCAATTCAGAGTGGGTGTTCTCACCGATGCACCAGAGTGAGCAAAATGCATCAGAGGATCACCTGTGTCAATAAGTGTAATTAGGAACTTTAGGTCATCACAGCTTATGAAAGTCATAGGAGTTTTGGTCCAAATGTTATTCCTACCACAGAGAGTGAGTTTTTGAATTTTTTATATATTTCTGTTGAAATGATAAGTTTCCACTATTCCAAAGAAAGGATTAGAAAGGCATTAAAGTCTGTTGCCTTAAAAAATAT EMBV3_13695 TGGAGGATCTGGAGGCTCTGAAAGTGGCAGGGTGAAATACAACCTGAACGCCCTCTCTCA Variant GeneID:512830|RNASEH2A:NM_001038534:35_cdna 865^991 1 EMBV3_01223 GeneID:512830 7 GENE RNASEH2A MGC134067 ribonuclease H2, subunit A EMBV3_12708 CATAGGGCAGCTCTTTGTGAAAGTGGTTTATTTTGGCCACCGGAGAAAGAGTTGGGATTG Gene BVT0102_074110 + 0 NULL GK000015.2:50266624-50283226 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160422 TCONS_00160423 TCONS_00160426 TCONS_00160424 TCONS_00160425 1 XLOC_097652 Coding TCONS_00160424 XLOC_097652 Coding Coding SAR1A 28:26539609-26553956 j TSS119974 3672 1 TCONS_00160424_2 154 6 0.744458385612714 0.0139504407651786 0.0107862253612334 0.00625156117053092 0.00606606129153186 0.00447553266675642 0.000401576187747978 0.00172949673415429 0.00740589999095676 0.00571732285190979 0.00136492973252933 2.55568762033046e-17 7.39860871660473e-05 0.000899514596552658 0.00344025991881867 0.00282285134204612 0.00453959153949161 2.14679726738354e-15 0.01155811870732 0.0116894891617276 0.00784304885290827 0.00524398771873159 0.00371912450339657 0.00216312953619607 0.00230579918553364 0.0124092543787541 0.0121320141902081 0.00889402245052765 0.000628775769019113 0.00120959670708634 0.00333671895935127 XM_005226384.1 SAR1A PREDICTED: Bos taurus SAR1 homolog A (S. cerevisiae) (SAR1A), 0.0 4338 99.96 0.655501089324619 XM_005269984.1 SAR1A PREDICTED: Homo sapiens SAR1 homolog A (S. cerevisiae) (SAR1A), 0.0 1355 78.59 0.420479302832244 TCONS_00160424_2 sp|Q3T0D7|SAR1A_BOVIN SAR1A_BOVIN GTP-binding protein SAR1a; 5e-105 303 77.78 0.993506493506494 3 coding 1 1 1 1 -0.0923018251395187 0.592724484685518 -0.0431477771811041 0.55825549979534 GTGGGGACGAGCACGCGCCCGGAAGTTCCGGGGAGGGGGGTGTTACGTATATCCGGCGAGTAGCTGGCGGTCCCGGGTGCTGCTGGGCTCTGTACTCTGAGGGAGGGTCCAAGCCGCTTGCTGCCGCCGGAGGAACCCCTTGGGCCGGAGTAAGCATTAATAATGTCTTTCATCTTTGAGTGGATCTACAATGGCTTCAGCAGTGTGCTCCAGTTCCTAGGACTCTACAAGAAATCTGGAAAACTTGTATTCTTGGGTTTGGACAATGCAGGCAAAACCACTCTTCTACACATGCTCAAAGATGACAGACTGGGGCAGCATGTTCCAACGTTACATCCAACATCAGAAGAGCTGACAATTGCTGGAATGACTTTTACAACTTTTGATCTTGGTGGGCATGAGCAAGCACGTCGGGTTTGGAAAAATTACCTCCCAGCAATTAATGGGATTGTCTTTCTGGTGGACTGTGCAGATCATCCTCGACTTATGGAATCCAAAGTTGAGCTTAACGGGAATGTGACCCTGAAGGAGCTGAATGCCCGCCCCATGGAAGTGTTCATGTGCAGCGTGCTCAAGAGGCAAGGATACGGCGAGGGCTTCCGCTGGCTCTCCCAGTATATTGACTGATGTTTGGACAGTGGAAATAAAAGAGTTTTACTTCTCTGGACTGATCCTATTCACAGCTTCCTCACGAACTTTTCTAATAGAACAAGGAAAGCTCTCCGACCGTGTCCGGCGTTGAGAAGCCAAGAGTCTCTGTCTGCTCTCTCATTGCCCAGTGGTGACATGTGCTCTTCTCCACACTGTTGGGAGCTAATGCTGCCCCACGTGCTGGTGCAGGTCAGCACCCCGGGACTTGGAGGTGGCAGGATTTGTCGAGTAGAGCTGTGTGCCATCATGGGCCACCTGGAAAGAAAAACACGTCTCACCACTGTGGTTGATTTCAAAAGAAAGTGATTCTATTTTTTAAAGAAAGTGTTGTTAATGTAATCGGTGACCCTCCTCATAATTTTTTTTTTTTAAGTTCACAATATACTTGGTCCAGAGTTTTCTTTTCTTTTTTTTTAATCTAGTGAATGGCATTTAAATATTTCATAAAATTATGCACAGATACACGTTGGAGTCCAGAGCTCAGTTAAGTGAACAGCAGGCTGGTGAGAGAGGCTCCCCCGTGTCCCTGACTGCCTTTAGTAGGTGGCACCACCCTGTGCACAGAGCACTAGGGAAGAGCAGAACTCCAGCCTCGCCGCTGAGGCTGGTTTCCACCGTGCCGGGCTCCGGTCATGTCTCCTCCCAACATGGATAGCAGATGGGTCACTGTGGAGGAGTTAGTTCTAGCCTGGGTTATTGTTACTGTCTTTACTCAATAAGTTACCAATTTCAGCCCGTCTTTGCTTTTATGCAGTTTTAAACTTTGATTTCTTTCTGTAGCACCTTCTTCATTTTCAGTTGTAAAAAGTGACTTTCGCCTCATGAAAGATTTGAGTACATCTCCCATGTTGTCACACACTACAGGTGTGTCCCAGTCATTTTTGCAAATTCTAGGGGAAATTTTTTTCTCAATAGGAGAGTCACACAGGACAAAGTTAACAGCTTAAGAACTCTTAATTCTGTGAGTTGAGAACTTCGACATCTGATATTATAGCATTTGTTTGAATCTAGGAAAGATTTATTTCACTTGCAGAATTTGGTTTCTTTATTGGACTTCATGAACTCTCTTTTTTTGTATTGGTTATCAATTTTTTTTTTGGTGTTAAAGGTTATCATCTGTAACTTTTCCAGATTTTGGGGGTGGGTGGGAGGTGTTATGAAATTGTCTTTCTCCAGGCCAGAAATAACCTGGGGAAATTCTAATCCAAGAACTGTGTGTTGAGCTGTTCCTTTTGAGCCAGCATCACCTGTCAGTTAGCACCTGGTATAAAAGCCTCAGTGTCCCCAGCAGTGTGATGAGGGTTATTTTTATAGCATTCCACTTTCCTAATGTCAGGTGTGAAATCAGATTTTCATGATCTTAACCAATGTTTTACCCTTGTAGTCAAGGATGAAGGGATAAGAGATGGTCTTCATGTGGAAGGATATCTTCTTTAATTAAAAATTAGAGGTATTTTTCTCAGAACTGAAAATTGTGATGTTGAGGCTTATTTGCAGAGGACTGAACTAAATTCAGTGGATTCTTGCTTTTAATGTGAGAGCATGGAAAGTGTGGATTACACATTCCTGGGGTGAGAGTATTTTTCTTTAGTTGGATTTTGCATTGTTAGTTTTCAGTACTGACCTGTTGGGAAAGCATACTTTTTCACAGCTAGGTACCAAATGCAGAGGCTCAACGAAGCATAAAGCTGGGAAGAGCAAGTTTTTCATTTATTAGCAAGCATAGCTGGTTTGGAAAGGGATTAAAGCCTTAAGTGAACAAATCTAGCTAATGGTGAATGAACTAGGTAGTTAACTTGCATACTTTTGATTTCCTTTGGCTAAAGGTAACCCATACTTCTCTGTCCAGAGATAGGAGAGGTGTGATTGCTTCAGTGTTAGTTTTCTTTTTTTTTCTTCCTATTTGTCCCTAGTCAATTTTTAGCAAGCTAGAAAACTATGGATTCTACACAGGGCAGCTCTTTGTGAAAGTGGTTTATTTTGGCCACCGGAGAAAGAGTTGGGATTGAAAAATCAAGTGGCGCCTGTCTGTTTTTTGCCCCACAGAAAACACAGTTCCTATAATAAAATAGAGGAAAGAAGCCGCTGTGAGGAGCTCGGCTCCTAACAGGATCAGAGCTTTGTACAGGAACTCCCATGAATTGCGACTTTTCATTCTGTTTTATCAGAGTGCGTATATGTCCTATTTCAGGAAAAATAAAACAGTCATTTACAGAAGAGAGTCAATCTGTATCTTAAGTGTTTTAATAAAAAGTTAAAACAAATTTTCTATCTTGCTCCTTTTTGGCATTGGCTTGTTCTGAGTATGAACATACAACAGGTAAGAGAGACAAATTTTGCTTATGAGGGGATGCAGGGTGTGAGTGTGTGGAAAGACCAGGCCAATTTACACATTCCACTACAAGTAATAAATTGAGTACTGTTTGTGAGCCTTGCAACAAATGGTGGTCCCAGGATTGGTGGTTATTTCTGCAACTGGATGGACATGGCAGACTTTTTGTACAAAATCTCATATATTAACACACTAGTAGGGGCTGGGTTCAATTTAGCCGTGTTTTATCATTTGATATAAAATTGGAGAGATTCAGTTAAATGTTACATTTTGCAAAATAGGAAAAGTAATGAAACGTATGCTTGAGCATTTAGTATGCTTGTAGGAAGCTTTGCTTTTAAAAAACCCAAATAAGGTTCTAAAATTTAAGTACTGGGATAAAATAGAATGGGAAGCAAAATGCAGCAGGTCGTTTTAAATTACCGGAGTATTAAATTACCGGAGACATCTTGAGCTTGAAACATACTGTGAAATGATGGCATGGGTTTTACGTTTATATAAATTTATTTGTGCTACTTGAGTCAGATCAGAGCATAAAAATTAAAGGCTAAGTCAATGAGCCCAGCACTCAGGGGGTCAGGACTGTGCTGTGATGTGTCGTAAATAGAGAAAAACCTGATGCAAACAGTTCATGCTGGAGGCTTGAGCATCACTCTGGAAAGAAACACTTTCTTAATTGCTGGGAAGTT EMBV3_18692 TGCATAGTGTGTACACCCAAGATAACAGAAGAAAATCTCTGGCGTTAGTATGCGGCAGAC Gene GeneID:538584|ARHGAP21:XM_002692070:178_cdna UTR3_Alt 2 NULL GeneID:538584 13 GENE ARHGAP21 NULL Rho GTPase activating protein 21 EMBV3_35779 GTTTACAGTTGTAGTTCTTGTTCGCGGATGTCACTAGGACCAGGCCCCATCACTCTTGAG Gene GeneID:614726|SH2B3:XM_002694499:379_cdna Constitutive 0 NULL GeneID:614726 17 GENE SH2B3 NULL SH2B adaptor protein 3 EMBV3_21710 TAAATTCCTCCGTCCAAAACACGAGGCTAAGGCGGCCTTGCAGGAACTCAGCCAGTGTTT Gene BVT0102_337549 + 1 EMBV3_34785 GK000011.2:105757254-105790353 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01595 TCTCATCTGTGCCTCCTCCATGCATTCCAGCCCCAAAGCATCATTCCATTGACCTCCCAT Gene GeneID:615907|FAM102A:XM_002691629:313_cdna Constitutive 0 NULL GeneID:615907 11 GENE FAM102A NULL early estrogen-induced gene 1 protein EMBV3_13001 CCGGGAAGTCTCGGGGCATCTGTTTTAGTTGTGTTCTTTATTCTCTTCCTCAGTCATTGA Gene GeneID:524942|UNC5B:NM_001099029:341_cdna Constitutive 0 NULL GeneID:524942 28 GENE UNC5B MGC140206 UNC5C unc-5 homolog B (C. elegans) EMBV3_15322 AAGGATTGATGATGGTAATCTGCCCACAAGCATGTAGACCCCAGACCCATTGGACCTACC Gene BVT0101_026339 + 0 NULL GK000013.2:75059922-75077193 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01620 ACACAGCCTGAACTGAACCAACTGACACAGGCAACGACCCAAGGTTTCCAGTAACCAACA Variant GeneID:539246|LOC539246:XM_002686049:262_cdna 54^307 2 EMBV3_38819 GeneID:539246 3 GENE LOC539246 NULL similar to C1orf51 protein EMBV3_35022 GTTGCTAGTGGGAGTGGCATGGGCAGGAGGCTTTCTTCATGCAACCATTCAGATCCTCTT Gene GeneID:508315|LOC508315:XM_002692866:26_cdna Constitutive 0 NULL GeneID:508315 15 GENE LOC508315 NULL similar to olfactory receptor MOR232-3 EMBV3_07342 GAGGTGGCAAAGTGTCGGACACGACTGAGTGACTGAACTGAAAATGAGCTATTGATGGAC Gene BVT0102_287669 - 1 EMBV3_38963 GK000010.2:63967224-64213456 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02464 GATAAAAGCCACAGGAGAAACACAGTCTGTCCCACCAGTCCAGACCCTTGCCCATTTGCT Gene GeneID:540247|CMTM4:NM_001083749:387_cdna UTR3_Alt 2 NULL GeneID:540247 18 GENE CMTM4 MGC139432 CKLF-like MARVEL transmembrane domain containing 4 EMBV3_10026 TAGAAGCTCTATCCAAGGACCTGCCACCAATTCTCCTAGTCCGTGGGAATCATCAGAGTG Gene GeneID:286845|SLC12A2:NM_174782:25_cdna Constitutive 0 NULL GeneID:286845 7 GENE SLC12A2 bsc2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 EMBV3_19323 CTCCGGAAGCAAACATCTTCTGGCATGTGGCTTATCAATGCTGGATTTACACTAACTGCC Gene GeneID:504993|NUDT13:NM_001045905:278_cdna Constitutive 0 NULL GeneID:504993 28 GENE NUDT13 MGC140322 nudix (nucleoside diphosphate linked moiety X)-type motif 13 EMBV3_04653 GGCCACCCCCACTACCGCAGAAATCACTGGAAACCAGGACTCAGAAAAAACTCTCCTGTA Gene GeneID:614705|PPFIBP2:XM_002693138:36_cdna Constitutive 0 NULL GeneID:614705 15 GENE PPFIBP2 NULL PTPRF interacting protein, binding protein 2 (liprin beta 2) EMBV3_10236 GAAAGTTAGTTACACAGTCATGTCCGACTCTTTGGGACCCCATGGACTGTAAGCTGCCAG Gene BVT0102_275510 + 0 NULL GK000009.2:88265633-88273893 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095525 1 XLOC_057734 Coding TCONS_00095525 XLOC_057734 Coding Coding ULBP11 19:19934668-19947936 j TSS71192 2513 1 TCONS_00095525_2 263 0.410266613609232 4 0.810884148639481 2.07966272034889e-14 9.57604430244109e-08 3.92054580510117e-05 2.98237666687948e-10 3.4414978649575e-06 6.63117105547457e-20 7.21526348200049e-05 9.8483383312082e-08 1.89622489176174e-05 0.000127577387748729 0.000130131538451949 3.08677678926063e-05 2.10147255167268e-05 0.000179278514422479 1.54656925951452e-05 0.00246592059526925 0.000478640440473594 0.00171165570261886 7.95256879269848e-05 1.65599834899955e-08 1.64332599531536e-07 0.000495337062879688 0.00054482180416974 0.000635229232059428 5.49679372379283e-07 1.0260255391781e-10 3.27993835770112e-40 0.000227647703660915 3.38863118622828e-05 0.000152631975944752 XM_005220082.1 ULBP11 PREDICTED: Bos taurus UL16-binding protein 11 (ULBP11), transcript 0.0 2309 100.00 0.508953442101074 TCONS_00095525_2 sp|Q6H3X3|RET1G_HUMAN RET1G_HUMAN Retinoic acid early transcript 1G protein; 8e-59 194 47.34 0.711026615969582 2 coding CAGACCAGAGGCGGAGGAGGCGCTCAGGCAGTCAGAGCAGAAGCGGAGGTCCAGGCCGCAGCTGCCGGCTAGCGGGAGAGGATCGCGGGTTCTGACTTGGCAGCCTCGCACTCCTGCAATATTGGGATCCAGGTGGCAAAGAGAGAAATGGGTGGCTCCGAGAGCAGTCTTGGCTTCCTCGTTTTGCTTCTGATTGTGTTGTTCAGCGGGACGTCCAGCGACGCTCATTCTCTTTCCTATAATGTCACCATTGATCCTCGGCCCAGAGATGGTCAGCCATGGTGTGAGGTTCAAGGAGAAGTTGATCAAAAGGTCTTTCTCTCCTATGACTGTGGTAGAGCTAAGATCAAGTACATGAGTCCATTGGGAGAGGAAGTGAAAAGTATGAACGCTTGGGAAACACAGACTGACACACTCAAAGACATTGGAGACTTGCTCAAGGAGCAGATGCCTGGTGTTACACCGGAGAAACACATAGACAAGGGGTCAGGCCCTCTGACCCTGCAGGCCAGGATGACATGCTGGCGAGAAGACAACGGACACACCAGTGCATCCTGGGAGTTTGGCTTCAATGGACAATTGTGCCTCCTCTTTGATTCGGAGAATGGACACTGGACAATGGTTCATTCTAAAGGGAGGCGGATGAAAGAGAAGTGGGAGAATGACAGAGATGTGACGGACTTCTTCAAGAAGGTCTCCATGGGAGACTGTCAGCACTGGTATCAGGATTTCTTGCTGAGCTGGAAGAAAATGTTGAAGACCACGGGCGACGGTGCTCCCAGGAAGCATGACAGGTGCCTCTCTCCTGCTCTTCACTTTAGATCCAGGACATCAGACCCCATGAATCCTGAGTCTGTTTTCCGGTTACACTTACACAGTAGATGCATCATCTCATGGGCTTTATCACATTTGGGGAAATCCTACTCAGCGTCTCTCTAAAAAAAAAAAAACAGAAACAATTTATTTTGCCACTTTGTCCTGGTGCTAAGTGATGGAATTTCTACACTGAAATGCTCAAGTCCTTGAAGAAATCTCCACAAACAGGACATTTTTTCATCATATTCTAGTTTGTGGATAATTAGACTCTGCCTCGTGACCTCGTTCTTGCAAATGATATTGCAAGAAAAATACCATCTGCTATTACAGGACTCAGGGATTGTTTCTGTGTCTGGAGAAATCACCTCAACCTATTTTCAATAGAAGATAGTTTTATTTATGACTGTTTCCCTTAATAATTTATCATGCTTAGTCTCTGTGTTAGTCGCTCAGTCGGGTCCAACTCTTTGTGACCCCGTGATCTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAACACTGAAGTGGGTTGCTATTTCCTTCTCCAGGGGACCTCTCCAACTCAGGGATTGAACCTGCGTCTCCTGTGTCTCCTGCATTGACAAGTGGATTCTTTACCATCTGAGCCACTGGGGAAGCCTATTTATTATGCTAGTGCTATTTAAATAAAAATCTCAGTACTCCAGGAAACTTGAAGTATTTTAAGATTTTCTTTCTAACCCCCAAGAGAGGTCATGACGTTTCACCCTTTGTCCATCTTGTGGGATTCGATGTCCCTGGCGATTCTGAGGACACATGGTCTGAGAGGACACGTGCAGCCTGTGTTCACGGCAGCGCTGCTCACAGTAGTCGGGACCTGGAAGCCACCTACACGTCACCCACAGATGAATGGGCAAAGAAGATGTGGGACATATGCACAGGGCAGTATTTCTCAGCCTCAGAAAGAATGAAACAATGCCCTGTGCAGCAACATGGATGGACCTGGAGAGTGTCATATTGAATGACATACGTCAGACAGAGGAGCAGAAACACCTTCTGAGGTCCTTCACACTCAGAATCCAAAACGTCGTGATACAAGTGCTCTTACTTACAAACCAGAAGGAGACTCACAGACTTAGAGAATGAATTTATGGTTGCCAGGGGGAAAGGATGGGGGGAAGGGATAGTTAGGGAGTCTGAGATCAACATGCACACACTGATTTATTTAAAATGGATAACCAGCAAGGACCTACTGTATAGCACATAGAACTCTGCTCAATGTTATGTGGCAGCCTGGGTGGGGATGGAAGGGGAGTTGGGGAAGAAAAGATGCATGTTTGGAAGTGAAAGTGAAAGAAGGTTAGTTACACAGTCATGTCGGACGCTTTGGGATCCCATGGACTGTAAGCTGCCAGCTCGTCTGTTCATGGAAATCTTCAGGCAAGGGAGTACTGGAGTGGATCGCCATTTTCTTCTCCAGGGGATCTTCCTGACCCGGGGATCGAACCTGGGTCTCTTGTATTGCAGGCAAATTCTTTACCAACTGAGCCACCAGGGAAGATAGAGACATGTATGTGTATGTTAAATCCCTAGCCTAGCTTCTTTGTATTGCTCATTCAGGACGCCTGCACTCTTTCTGGGTGTATATTTCCGCCTTGCTTCCCTCTTAAATAAACGAACTCTTTCTGTATGTCTCCAGTAATAAC EMBV3_13625 CTGTCTCCCTTGTCTTGGGGTATTCTGTAGATTGATTGCAGATTTCTTAAACCTGAAATG Gene GeneID:535287|UBE2D1:NM_001038167:96_cdna Constitutive 0 NULL GeneID:535287 26 GENE UBE2D1 MGC134214 ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) EMBV3_35700 AATCAGTAAAACAGTCTCCGTGTCTGCAAAGTGCGGTAAACACGGGGCCAGCCTGTCAGA Gene BVV0101_028650 - 0 NULL GK000023.2:47714289-47789050 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138078 1 XLOC_084287 NonCoding TCONS_00138078 XLOC_084287 NonCoding NonCoding - 23:47783256-47785382 - TSS103368 2126 2 TCONS_00138078_1 69 0.479774223894638 1 0 0.000159991771210809 3.3085208352952e-05 0.000221991560416351 7.81199626999123e-06 0.000123081150800461 7.06662257488931e-05 6.0346991439648e-05 0.000133540139883957 0.000716272047508256 0.000528343115360517 1.18443083771481e-05 0.000116049949076477 4.31878863716949e-05 4.42520819874872e-06 4.61542561090446e-06 0.00154046941751336 0.000570069986975308 0.000106217256549069 0.000111308014133361 0.00035517381267286 0.000104236734100426 0.000198955046937756 0.00114783511505577 5.51986678645413e-05 0.000531206001360547 0 9.64582789315933e-05 2.71077429355143e-05 7.07870093507487e-05 2.8279574401732e-06 XM_005213727.1 FREM2 PREDICTED: Bos taurus FRAS1 related extracellular matrix protein 2 (FREM2), transcript variant X2, mRNA. 9e-12 77.0 83.33 0.0333960489181562 0 noncoding 0 0 0 0 0.0283728655767453 0.795624500804302 -0.00142049553734122 0.9776061336539 TCATTTAAGTATTTATTGAGCATTTATGATATTTTAGACACAATTCTAGGTGCGGGAACACAAAACTGAACAAAGGTAAAAACCCCTGCCCAGTCTTTAATAAAGTGGAGCTTATTCTAGGAGGCTGGGAGGTGAGGGAAAGACACACGACATGTGTAAGGAAATCTCAGACATGCACGCACAGGTAGAGCACGGACGCACCGTGTGCTCGGCTCCCAGCCGTGACACAGAGTGACTATCGAGGGAAAACACATTACACGGAGAGTTTGGTTTCCCAGTGCATATAAGAGTGATGCTCACACTTGAGTGCTGTTGCTAAAAAATGCTACCCATCACCCGAGCTGTCAGCGAGCTGTAACCTTTTTGCTGGCAGAGGGTTTGAAAGCGAGAACCACCACCACGTGGCCAGGGGTGCGAGTGAGCAGACGGCGCCAGGGACGGCAGTCAGACGCGCCGCACGGGGCTGCCACTGCCCTTCAATCAGTAAAACAGTCTCCGTGTCTGCAAAGTGCGGTAAACACGGGGCCAGCCTGTCAGAGCAGCTTCAGAAAAACGCAAAGGTCACGAGGACTGCAGGGGCCTCAGCTGAGGGGGCAGACCGCACGCCAGGAGTGGTCAGGACAGGTCACTGCGAAGGGGACGGGCAGGCTGGGCAGAACCGAGACTCAGGGCAGCTCAGCACACATGTTCTGGAACTGCCTCCACCAGGGGAAACGGAATCTCAGAACCAAAGGCATGTCAGGGGACACCGAGCTGGGCCGGTACCAGAAGGCACTAACAGTCCTCCTGAGGCCTTCCTCTTTGGCCCAGATGATTAAACAATTAAAGACCGGGCAAAAAAAAAAAGGTTACTTAAAAAGAACAAACAAAATAAAAATGCAGACACTTGTATAATACAGTACAAGTATGTGGCATTACAAGTATGTGGCAGGCCCTGTTTTAAGTACTTAATAGACTTCGATTCAAAAAAACCCCAGCTCTTTTCTTACAGAAACTGTAAGAGAGAGAAGAGTGTAATGAATCCCAAGACACCCTTTAGTACTCTGTCTCAGCAACTGTTGACCTGCTATTCTTCCTCCATTCACCGCTGTCCTTTGGGGAGTCAGGAAGGATGGAGAATTTTGAATCACAGGCATCCTATTCATTTCACCCAGTGAGACTTTCGTCCAGGCTCTGAGGGAACCGTTTCAAGCACAAATACCACTATCGTATCTGGTGAAACAAACGATCCCTTGCTCGAACGATCCCTTACTATCACGTGACACCTCCTCCATGCTTAAGTTTTCCCTGTTTGTCTGAAAAGAAATCCCAAACAGCCCATCTTTTTACAACTGGTTTCATCTAACCAGGGTCCAGCTGAAGTCCACAGCACTGGGACACGTCTCTTAGACCTCTTTTCCTTTTTATTAGACGTCTGGCTCCTTCCCTCCCTGCTGCCCTTTTTTTGACTCCACTGACCACATCCTCCCAGCATCGTGGATTCTGCTCCTGTGAGCTCGTGTTTCCTGTAACCTGCCAACCACAGCAAGAGGCTTTGTAGGTTGAAGTTCAGCCTTTCTGGGGAGAGGCAAGGTACCTTCTAGGTGATTCCGTGAACCTCTTTTCACACCGCTGCAGGAACACTGAAGAGTCAGTGGCTGAGTTCCCTGTCACTGGCCTGATCCAGCCCTGGCCAAGCTCCCCGGGGCTCCTCTCAGCGTCCCTCATAGGAGCCCCACGAAGCAGGCACGGTGCTGAACTCCACACGCTGGTGGCACGTGCCTGCTTCACGGGGTCAGGCTCCCAAACCTTCACCACCCTGAGATGCTCCCTCAGGGCCGTGTGGGACCCATGCGGCGTCCGACGCCAGCAAAGCGCCTCGTATCCTCAACTGCCCCTCTGGGGGACCCCTCTCCTTGCCCCATTTAAATGTTGGCTGGCCGGACGGTAGTGATGTCATCAGACACCACTCATCCCCCATCAGTGGCCGGCCCACACCCCGGCCCTGCTGGAGACTCACACATGTCTCTCACAGACAACCAGGCCTGTCCTAACCCAGGACGGTCCTTCCAAAACGCCAGCCTAGGTCCCCTGATTGTCTAGCCTTCAATACCCTCCACTCCTCGAGGCAGCCACTCACACCCCCC TCONS_00135394 TCONS_00135395 TCONS_00135396 TCONS_00135397 TCONS_00135398 . 3' 111 TCONS_00135394 TCONS_00135395 TCONS_00135396 TCONS_00135397 TCONS_00135398 . 3' 2236 EMBV3_36467 AACTGTGTCCCTGTTGCAGTAACCACTGTGCTGGGGGGCCATAAGCTCAAGTTCAGACTG Gene BVV0102_288518 + 1 EMBV3_23205 GK000022.2:50597463-50600551 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01410 TGTCAACAGGAACACTGAGAGTTTTGCAAATACACGATACACAGTGTGGCCTCACGCGCC Gene BVT0102_203766 - 0 NULL GK000022.2:59557141-59573115 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127663 1 XLOC_077713 NonCoding TCONS_00127663 XLOC_077713 NonCoding NonCoding IQSEC1 22:59557639-59559489 = TSS95443 1850 1 TCONS_00127663_2 109 1 0 0.000279467412487765 2.71579638339593e-06 3.50152213747446e-05 0.000184037532913162 5.60436759266163e-05 1.9335464454293e-06 9.92966649179517e-05 0 8.52987319938724e-06 0 1.48487767743254e-05 6.44266776670275e-06 0 2.54270102617846e-06 1.34809832071425e-06 8.64992140414241e-05 3.70184977803881e-05 5.42504953883264e-05 3.87617929117997e-05 0 1.6409337800295e-06 4.01116831504911e-06 9.42198809688664e-05 0.000511999583906277 5.61767874538307e-06 0.000133292710045537 9.50131990564052e-06 7.26878238781762e-05 7.87234092037003e-06 0 NM_001206814.2 IQSEC1 Bos taurus IQ motif and Sec7 domain 1 (IQSEC1), mRNA. 0.0 3288 99.51 0.998918918918919 XM_005265623.1 IQSEC1 PREDICTED: Homo sapiens IQ motif and Sec7 domain 1 (IQSEC1), 3e-74 284 70.05 0.410810810810811 0 noncoding 0 0 0 0 -0.0641662358372599 0.743271399095181 0.0275649692367268 0.648249671050768 CTGCGGCGGGACAGCCCCGGGGAGCCCACCCTGGCCTGCGGCCGGGGCTCTGCCCACCCCACCCCACCCCACCCCTTTCTCGCATCATCCAGGTCTCCAAACCAGCAATTCTGCAAACCGAGCACTTTGTTAATCTCCACAGAGAGCAAATACAGCAATCTAGAGTTGAGCCTTTTCTTTTTTTTTTCTTTTTTGAAAGAAGTGTGACTTTAACCTGCCCGCCTTTATCTTCCCATCCGTGTGGTCCTCCTCCCTCGGGCATCGCTCAGAGAGGTGGGAAGCACGGCGTGTCTGTTCCGGTCCGGGCTGGGCTGGGGGGTGGGAGAGGCTCCCCAGTTCCGCGGACCCGGAACTCCCGGTCAGCCCTCAGAGCCCGCCCCCGAGGCGTCCTGTCCCGCGGTTCCAAGGGCGGCGGGTGACTGGGAGCAGTCGGCGTGTACTGCATGTCCTCCGGCGTCAGGCGCGTGAGGCCACACTGTGTATCGTGTATTTGCAAAACTCTCAGTGTTCCTGTTGACAAATAGTTGAAGTAAAGTGGTAACATATTAAATATGTCGGCTTTTCTTCACCGTCTGTACCAATCGTAGGCTCTAACTGTAAACTCCAGGTTGTTCCAGAAAAGATGCAGGCGCGCTGGCTGGCAGCAAGCCGCCCTTTCTAGAGGGCCATCACTGATGGGGCAGAGCCCAGTGGGGTGGAGCTGGGGCACAGGGCACCCTCTCTCTGTGCGCCATTTGGAACCCCCACCTCCGACCTCTTGGGTCCACAGGGCTGGGCGCTTCCAGCTTTCTGCTGGTGGGTTCCAGTCAGTGAGGTTTCATCAGCGTTTCAGGGACAAACGTATCACGGGATGAGTGTCCCCAGAAGGCACACTGTTCCGTGGAGGAGGCTGGAGCGCGGCCGCCCCGACCTCGTGGGGAAGCAGGTGTTCCTGATGGGCTGGTGGTCCCAGGCAGCTCTCTCAGGACCCCAGCCCACCCCAAGGTCCGCCTGCCCGCACAGGAGGCAGAGGCGGGCGTCACCAGGCCGCGTGTCCTCCGTCCTCACTGTCAGGACGCGTGTGGGGCGTTTTGCTCACAGATTATCTCAGCAGGAGACCCTTAGAGGAAGCAAGCTGGTACCATCACCCAACATCTTTTCTGGGACAACAATGAAGTCGTGTATTTTTATTTTTTTTTAAGTTTATGAATGGATTGTATAACAATGTAAAAATAAAGTTCATCCTAATAAGACGTGCGCCTCTTACTTAAAAACGTCCTCAGTCGTCCTGTGTAAAGCGATTTTCCATCCCCCACCGCATGCCCCAGGAGCCTCTCGGTTTTAAGATGAGCTGAAGTGACAGCAGGTAGCACACGTGACCCTAGATCTGACTCGGCACCGCACGAAGCCGTGTCGCCACAGGTAAGCATGCACCTTACCATCCGCTGTAAAACACCACCACCCTCCCTATCTGAAAAACAAATCCTTCCGTAAGTATCTTAAACACGGCAATGAAGATCCAGGAAGCAGTTTGCGAGTGAGTCGGCGTGGGGCTGGAATGGGGGTGGGGGGCCTGATCTCCGCGTGACCCCCGTTGCGGTCACAGGGCACACTCAGGCAGCACCGTCTCCTCTGGGGCACTGTAACTCACCTTCGAGTTGTCTCCCACAATTAGAACCAGGACTTGAGTGCAGGCTGTTGAGACCTCAGGGGCGCCCTGGCTCACGGGAAGCCCAGCACCCACCGTGTGACTTTGGGGAGACAGAAGTGGTTTTGTTTCTCTGTGTGTTCTGTTTGTAAGTAACAGACTCTACTGATGTAAAACCATAGCTGTGATCAATGTGGAGAAAGCAAATAAATCCTTTGAAACA EMBV3_00322 ACTTTTTAAGAATCTAGTCTAGGCACAAACAACAGCAGCAGACCTATCGCAGAGAGCGAG Gene BVV0102_304244 + 0 NULL GK000005.2:98171745-98196766 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42620 CCCTGAAAGTGGCAGCAAGATTATGGTTCAGTTTCCCCGTAACCAGTGTAAAGACCTTCC Gene GeneID:541303|MED17:NM_001034730:7_cdna Constitutive 0 NULL GeneID:541303 29 GENE MED17 CRSP6 MGC127631 mediator complex subunit 17 EMBV3_25599 CCTCTTTGGAGTGCTGTCACGAAGACATGTGCAACTATAGGGGGCTACAGGATGTCCTCA Gene GeneID:530147|BAMBI:NM_001046309:61_cdna UTR3_Alt 2 NULL GeneID:530147 13 GENE BAMBI MGC137853 BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) EMBV3_06434 AAACTCTACCACGAGTGTGCAACAGTAAGGCTCCTAGACTTCCCACGCCGACTCTAACCT Gene BVV0101_034041 + 0 NULL GK000002.2:131857643-131928550 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25111 GACAGCCTGACCGAGTGGAAATCTAAGTGCTCTGATCATGGCGATGTTTGCCTGTTTTAG Gene BVV0102_358409 + 0 NULL GK000013.2:68468558-70066183 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043752 TCONS_00046116 2 XLOC_026019 XLOC_026619 NonCoding TCONS_00046116 XLOC_026619 NonCoding NonCoding - 13:69914348-69928504 - TSS33501 800 1 TCONS_00046116_1 104 0.425 3 0.94369480748852 0 0 0 0 0 0 0 0 0 0 1.14456847782189e-05 0 0 0 0 6.60287226309985e-05 0 0 0 6.29242953255283e-05 0 0 0 0 2.01216867518563e-10 3.52273703638927e-05 0.00142816734900089 0 1.00182881783108e-09 0.000873066120080358 XR_227606.1 LOC101907067 PREDICTED: Bos taurus uncharacterized LOC101907067 (LOC101907067), 6e-53 212 100.00 0.145 0 noncoding 0 0 0 0 0.0132192250673654 0.911271506082825 0.0358515973689232 0.460109251877856 CGCCCTCCTTCTGAAGACTGTGTGCATGCCCAGGGGCTGATCTGGGTCACTGCGGTCCTGTTGCCTCCTTTCCTTGGTGCGACCAGTTTCAGAAGGACAGCCTGACCGAGTGGAAATCTAAGTGCTCTGATCATGGCGATGTTTGCCTGTTTTAGTGACTGCTGTGTCGCCAGCATCTAGAGCTGCGTCTGGTGTGTGCTGTTGTTGAGTCCCTAGGTCGCCTCCGACTCTGTGAGCCCATGGACTGCAGCACGGCCAGGCCTCCCTGTCCCTCACCTGTCTTCTGGAGTTCACTCAAGTTCATGGTCATTGAATCCGCGAGGCTGTCCAACCGTCTCATCCTCTGCCGCCCTGCTACAAGCCAAGGGATGTCAAGGAATGACAGCAACCAACAGAAGCAAGAAGAAAACCATAAAAGAGAGCTCAACCCTGACAACATCCTAATTTTGGACTCCTGGCCTCTGGAACTGCTTCACTTGAGTTTCAGGCACCAGAAGTCCAGTAGCCACATTCTACAGATCCCCAAAGTTCTCTGCATGAGCAGTGAGATATAAGCTTCAGAAGGAAGAATGGTCCAGGAGCCAATCTTTTTCTCAAGCAGTGATGGCAAGCTTGTGAGCCTGTGTTCTTCCTGCCCATCCTTGGTCTTGGACCAGCACATCCTTGGGCCACTGTGCTGGTCAATAGTGGCTTACTGTAATATCCTGAGTGCTGCAGCAGGAAGAAGATTGCTGACTTTGGACCACAGATATGATGACAAGTCTTAACTGAAAGGCAGACTCTGACTTTCTCTCCTCCAA TCONS_00046118 s 3' 151505 TCONS_00046118 s 3' 137680 EMBV3_13850 CAGATCGAGGAGGCGCTCGTGCGCAGGAAGAAGATGGAGCTGCTACAGAAGTACACCAGT Gene GeneID:783414|ISY1:XM_002697161:120_cdna Constitutive 0 NULL GeneID:783414 22 GENE ISY1 NULL ISY1 splicing factor homolog (S. cerevisiae) EMBV3_36601 CAGACAAGACGACAACAATAACAATCTGAAGAATTCCACCATGCCATCAGCTACATGCAG Gene BVV0101_036088 + 1 EMBV3_00628 GK000014.2:44187673-44969001 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31679 CAATATATCCAGCCGCGTCCCTGGTCCTACTTGGCTGGGATTCGGGTAAACGTGAACAAT Gene BVT0102_066840 + 0 NULL GK000017.2:29122610-29128576 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075140 TCONS_00075138 TCONS_00075142 TCONS_00075139 TCONS_00075143 TCONS_00075136 TCONS_00075134 TCONS_00075141 TCONS_00075137 1 XLOC_046501 Coding TCONS_00075142 XLOC_046501 Coding Coding SCLT1 17:29126403-29300799 j TSS56736 2339 1 TCONS_00075142_3 507 19 0.98669686630924 0.00235974679754647 0.00351741273167451 0.00421103288787917 0.00340214660569561 0.00579448077809271 0.00101175984749231 0.00410438978668392 0.00290603371751455 0.0031908207328962 0.000918257080390883 0.000261193313148839 6.08487016949035e-05 4.57272476342425e-08 0.0018967851932253 0.00116104666349425 0.000617394939980079 0.000494012105568485 3.80097435209007e-32 4.67466837683554e-05 0.00636806458877618 4.15421674324708e-05 3.22980636712644e-55 6.67954173530199e-11 1.77062338339672e-23 6.32550078084044e-09 0.0034694172676289 0.00343068476008688 0.000264265393227242 6.61086025558868e-05 4.8456137717076e-05 XM_002694387.2 SCLT1 PREDICTED: Bos taurus sodium channel and clathrin linker 1 (SCLT1), 0.0 4132 99.96 0.980761008978196 NM_144643.2 SCLT1 Homo sapiens sodium channel and clathrin linker 1 (SCLT1), mRNA. 0.0 2515 84.24 0.980761008978196 TCONS_00075142_3 sp|Q96NL6|SCLT1_HUMAN SCLT1_HUMAN Sodium channel and clathrin linker 1; 0.0 791 82.93 0.968441814595661 0 coding 0 1 0 0 -0.0724029750180908 0.526839941375181 -0.0049302913036241 0.914251280540801 GGGCGGGCCGAGTGGACTTCCGCTGCTGGCCCCGGGCTTCTCGGTCGTCCAGGCGTCGCTCCCTGCCCCTCCAAGGATGCCGCCGCCCGGCTGCCTGCTGGCTGTCTTGGCGCTCTCCTGAGTGGCCCGACACGACCCCGAGTGGCCCGTGGGACGTCCAATATATCCAGCCGCGTCCCTGGTCCTACTTGGCTGGGATTCGGGTAAACGTGAACAATTCACTTGGCGGGTCCGCAACAAACCTGAAATTTGGTGTCTCGCGTGAGCGAGGGACTGTGCTGGGACTCGGGAGAAGGAGGCGCGGCTGGGCTGTTGACGCCGCGTGAGTAGGATGCAGATCACACTGCTCGAGTGCTGGACAACCTCCGGAGGTTTGCCTTAGTTTTGCTTTCCCGCATTGCGAGCTTTGTGTCTTTTTGAGAAAAGTAAAGGTAGTGAAAGCTCCAAACAAATTGCATCCAAATGGCCACAGAAATCGACTTTCTGCGAGATCAAAACCAAAGACTAAATGAAACCCTTAGGCGGTATCAAATGGAAAATTTTTTCAAATATTCAACAGTACAGAAAGGTGTCTTCAAAGGAGATGGAGATGACACATTAGAAAACTCGGCAGCTGACCAAAGCTTTTTAGTTCCTCTTATAACTGAGTATGATAAGCATTTGGAAGAACTAAATGGTCAGCTGAAATATTATCAGAAACAGATGGGTGAGATGAAACTACAATTTGAAATGTCACCAAGGAAAATGAAAGGTTGCACAATGAATTAAAAGATGCTGTTGTTGCAAAGCAATTGCAGGCCCTTCCCTTTGGCACAGAGATGGGAAATGAGATATATACAGATGACGAAACAGTCAGGAATCTTCAAGAACAGCTAAAACTGGCCAGTCAGGAAAAAGCTCAGGCTGTAGAACTCTGGCAGACTGTTTCTCAGGAGTTGTACAAGCTACAGAAACTTTACCAAGAACATATGACTGAGGCCCAGATTCATGTTCTTGAAAGTCAAAAGCAAAAGGATCAGCTGACAAGTTTTCAGCAGCTGACCAAGCATCTTCATGTTACTAATGAGAACGTAGAATTGACTAATCAACATTTTCTGACAACAGTAACTGAACAAAGTGCGGAAATCGAGCAACTCCGAAAACAACTTAGGCAAGCCAAGTTAGATCTGAGAGTTGCAGCAGCAAAAGTGGAAGAGTTAACTAAAGTGACTGAAGACCTTCAAGGACAGATGCAGAAGAAGGAGGAGGATATGGTTTCTGCGCAAGGAAGAGAAGAAGCATCAGATAGGCGCTTACAGCAGTTACAATCTAGTATAAAACAATTAGAAGCAAGATTATCTGTGGCAGTTCAAGAAGCCACCCAAATAAGAGCAGAACGAACACATCTGGAGGAACAGACCAGAGCGTTACAAGCAAAGTGCAGTGAATTAGAAGATGAGAAATACGAAGCTATTGTAAGAGCCAGAAATAGCATGCAACTCCTAGAAGAAGCTAACCTTCAAAAAAATCAGGCTCTGCTTGAGGAGAAGCAAAAACAAGAAGCTATAGAGGAAATGAAAAAAACGGTTTCTCAGATTGTGAAAGATGCTTCCCTAAGAACCAGGACAGCGATTATAAACACAAGAAAACAATATAATATACAGATTTCTCAACTAACAGAAGAACTTTCAGCCCTTCAAATGGAGTGTGCTGAAAAACAAGATCAAATTGAACGAGCCATCAGGGAGAAAAAAGCAGTGGAAGAAGAACTAGAAAAGATTTACCGTGAAGGCAGAATTAATGAAAATGATTACAGAAAACTAGAAGAAATGCACCAAAGATGCCTGGTTGCCGAGCGTTCAAAAGATGATCTTCAGCTGAGACTTAAGACAGCAGAAAATAAAATCAAACAACTTGAAATAAATTCCTCGGAAGAGATATCACGTTGCCAAGAAATGATTCAGAAACTTCAAAATATATTGGAGTCTGAGAGAGAGAACTGTGGATTTGTCAGTGAACAAAGGTTGAAACTTCAGCAGGAAAATGAACAGTTACAGAAACAGACTGAAGATTTGAGAAAGATTGCTCTCGAGGTTCAAAAAAAAGCCAAATTAAAGATCAGTACAATGGAGCATGAATTTTCAATAAAGGAACATGCGTTTGAAGTTCAATTAAGAGAAATGGAAGACAGTAATCGAAATTCCACTGTTGAACTGAGGCATCTCTTAGCTACTACACAGAAAGCAGCCAATAGGTGGAAAGAAGAAACAAAGAAACTCACTGAAAGTGCAGAAATTAGAATCAATAATCTAAAGAAGAGTCACAGGCATCCCCACTTCTCCCAGAGACTCTCCAACAAG EMBV3_22698 GGATGACGGCCTGGATGAAGCATTTTCAAGTGCCTCTCGCCTGTCGACTGGGACAAGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15683 GGCACAATGGAGGACAAACGTAACATCCAGATCATCCTGACCTTCCGACAGCTGATGGCA Variant GeneID:505860|SLC25A44:NM_001077857:82_cdna 206^952 1 EMBV3_00685 GeneID:505860 3 GENE SLC25A44 MGC142322 solute carrier family 25, member 44 EMBV3_33216 AGATCGCCTTAAAGAAGCAGGTATGTACTGTGGCCCGCTGCTCTCTGAACAACAGCTCTT Gene BVT0101_069132 - 1 EMBV3_27889 GK000029.2:17490166-17496571 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35308 TGGCCACAATGTCCTCTCCCACTCCTATTGTCTTCACTCAGATCTAATCCAGCTGCCCTG Gene GeneID:526013|LOC526013:XM_002693274:44_cdna Constitutive 0 NULL GeneID:526013 15 GENE LOC526013 NULL similar to olfactory receptor Olr135 (predicted) EMBV3_19151 ATTTCATAGGGCACTGCTGTGGTTTCCATGGTCAGGGCTGGGTTGTTCCAGGCTTCAGTT Gene BVT0102_034642 - 1 EMBV3_31956 GK000001.2:43054435-43541935 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003154 TCONS_00003155 TCONS_00003157 TCONS_00003160 TCONS_00003162 TCONS_00003156 TCONS_00003152 TCONS_00003158 TCONS_00003153 TCONS_00003159 TCONS_00003161 1 XLOC_000804 NonCoding TCONS_00003153 XLOC_000804 NonCoding NonCoding - 1:43055268-43155368 - TSS1646 865 2 TCONS_00003153_1 62 0.234682080924855 5 0.991408505579476 0.00447826946260859 0.00571072721104107 0.0046124997537795 0.00368155355178648 0.00414728393403354 0.00280954000021874 0.000729322762914915 2.73506808256637e-104 0.00220993283070756 6.31446718869808e-05 7.34092669042241e-62 0 0.000195838386733352 1.71946684975441e-58 8.37080843059108e-05 0 0 0 0.0019132698767712 0.00388365097179985 0.00370563141069635 0 0 0 0.00217057880323206 0.00145767285489836 0.00367881465337385 0 0 0 XR_229214.1 LOC101903020 PREDICTED: Bos taurus uncharacterized LOC101903020 (LOC101903020), 2e-10 71.6 77.78 0.113294797687861 NR_104234.1 ZNF385B Homo sapiens zinc finger protein 385B (ZNF385B), transcript variant 5e-17 93.3 79.34 0.138728323699422 0 noncoding 1 0 1 1 -1.14643968050083 0.000498142001457178 -0.0347404073723385 0.638267801160178 GTCTTCTACTGGCTTGAAGCAGGCAAGAATTTTCAGTGTTTTTTGTCCAGAAGAACTTGGCTTGAGATAAATTTTGGCTGTGCTCAAAGTTGAGTAACTAGGACATGAAAGCCGGGCTGCTCAGAAGACAGCCAGTGAGCCCAGCCTCCTGCCTCAGGCAATGTATGTCCCAGTCAGAGTCCTACTCAAGAATTCATGTCATCAGAAGTAAGTGGCTTGTTCTTATTGAAGAAGACATCGCTTGGAAGGATATGCCAAATAGTGTCCAAAGACATGAAGCAAGGAATCCTTGAAATCAGAAGAGGAGGCAGAACTGAGAGTCATAAGCTACCACCTGAAAAAAATTCTACCAGCTGTTGCTGGTTTTCAAGATGGTGAAGAGGGGCATGCGCTGAGTAGTACAAGTCCGGAGTCACTGGATAAAGGCAACAAAAACGGGTTCTCTCCTAGAGCCTCCAGCTAGGAACGCAGCCCAGCAGAGACATCTTGATTTTAGCCCAGTGAAACCCAGGACAGACTTCTGACCTCCAGAACTAAGACAAGGAAATATTGCTTCAAGAGATCTAATTTGAACACTGTGCCAGCCAAGTAGTCTTCAGAAATATTCACAATCCATGCCTTCAAGCAATGTTATTGAGTACCTACTGCAGGAGGTGGAAAATACACAAATAAGTGGGTGAACAACTGAAGCCTGGAACAACCCAGCCCTGACCATGGAAACCACAGCAGTGCCCTATGAAATGGGGAGGCAATGACTGGGAAGAAACCTGGGTCCCTGGAGCAAAGCTTCCCACCACCAAATTCCTCAGTGGTCACCATGCCGGGCAGGGGATGGCAGCATCTGCTGGATCACAGTTTTGGGAGC TCONS_00003150 s 5' 222389 TCONS_00003150 s 5' 222452 EMBV3_35957 TGAATCATCCCGGCTCAAATGCAGCCTCCAACTCTTCTCAAGTGGGACCTCCTGCTAACT Gene GeneID:510183|EHD3:NM_001098004:38_cdna Constitutive 0 NULL GeneID:510183 11 GENE EHD3 MGC139254 EH-domain containing 3 EMBV3_26507 CGGGGGTCACAGCTACTTCTTCAAGGGCGCCTATTACCTGAAGTTGGAGAACCAAAGTCT Gene GeneID:282872|MMP2:NM_174745:69_cdna Constitutive 0 NULL GeneID:282872 18 GENE MMP2 NULL matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) EMBV3_01126 GTGTCCACCAGTATCATCGAACATGTGAATAGGTCATCAGCAGAAACCGAAGCCAGTCGC Gene GeneID:531557|LOC531557:XM_002687680:38_cdna Constitutive 0 NULL GeneID:531557 5 GENE LOC531557 NULL similar to MGC152498 protein EMBV3_07562 TCCTTCAGGGACAAAGCAAGATGGAAGATTAAACACCACGACAGTCCCTACAGAACGCCG Gene GeneID:100335464|LOC100335464:XM_002690586:31_cdna Constitutive 0 NULL GeneID:100335464 10 GENE LOC100335464 NULL hypothetical protein LOC100335464 EMBV3_14689 CTAGCGGTGCATCTGTGCCTCTCAAGCTTTGGAAAACACCAAGTCTGATGGGACAACGGA Gene BVT0102_363425 + 0 NULL GK000002.2:107041373-107100143 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106096 TCONS_00106097 TCONS_00106100 TCONS_00106098 TCONS_00106101 TCONS_00106099 1 XLOC_062720 NonCoding TCONS_00106097 XLOC_062720 NonCoding NonCoding PNKD 2:107083031-107093824 x TSS78155 780 1 TCONS_00106097_1 91 0.682051282051282 3 0.928002223869533 3.20567486146825e-10 0.000704650565726536 0.000868375810399651 8.65969411931507e-11 0.00089495886960657 0.000379365841805013 0.000565548207601156 0.000181984451311872 0.000813788567855079 1.71348113638128e-05 8.31036493058391e-10 2.36026017635649e-09 0 0.000361810498768922 8.47463690654796e-10 0 0 0 0.00195512529740648 0.00197138825632263 0.000551962308074738 0 0 0 0.00135342303238141 4.75309909035395e-07 0.00136901708450862 1.7243361294146e-23 0 0 XM_001789005.4 CNNM3 PREDICTED: Bos taurus cyclin M3 (CNNM3), transcript variant X1, 2e-08 64.4 85.45 0.0692307692307692 XR_111404.4 DNAJC3-AS1 PREDICTED: Homo sapiens DNAJC3 antisense RNA 1 (head to head) (DNAJC3-AS1), misc_RNA. 2e-09 68.0 78.05 0.103846153846154 0 noncoding 0 0 1 1 0.137520213908555 0.419924018652651 -0.0297274150178813 0.701127481610542 GCCAAGGCCTTGTCCTTGAAGCATATTCACGCCTGGGTGGTGACCATGTAAAACCACTTCCCCTGCAGCTAGCGGTGCATCTGTGCCTCTCAAGCTTTGGAAAACACCAAGTCTGATGGGACAACGGAACGTGCACATGGGCAGGGGTGATGCACATATCATCACGTCACATCACACGTGTGTGCTCGGTCCCTGCTGCCCTGACCTTGCTTCACACACCGTGTTCACCACGGCCATGAGCGCAGAATTCTGGTGGACCCTCTATGTGTGGGAATTCAAGACCCAAGGTGAAGACAAAGAAGATGACAAAATAAACAAGGCGAAAGGACAGAGAAGGAGGACAAGAGCTGCTATTCTAGATCTGATGGTCAGTCACGGAAGGCCTCTTTGAGGAGGTGACATTTCCAAGAAGGAAAGGGGACAGGACGTGTGAGAACCTGGGGAAGGCGCACCAAGACCAGGTGAGCGCTGGCGGGAGCTGCTGGTTCTTGCCTTCCCGCCTGCTGTGCCACGGGGACAACAAACACTCGGCACAGCACGGATGGGACTGGCTGGATCAACCTACATATCCTGGACTGGACTGTAGACCAGAAAAGGAACGTTGGGGAGACAATGCACGGAATTTCACTGGAGTCTGGAGAGTGGTAACGGTTTGGATGGATGTTAATTTCTTGGTTTTGATGACTGTACCATGGTTATGGAAGATGTTAACATTTCAGAGAACTGGGTGAGGGGGTATATGGGAATTCTTTGCACAAAGTTTGCAAATCTGAGATGATT TCONS_00103280 TCONS_00103281 r 5' 3839 TCONS_00103280 TCONS_00103281 r 3' 274 EMBV3_43604 GAAAGCGGCCATTTCTGACACTTGGAGCTCGAGGCCGTTGCATGTCGTTTTTCGCCTGGT Gene BVV0102_154937 + 0 NULL GK000026.2:47843801-47852174 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11466 ACCTTGGAGGAGCTGGGGGAGGACTCTTAGGGTTGATGGAGGGCCTAGGACAAAAGGAAT Gene BVT0102_106827 + 0 NULL GK000003.2:108777676-108785458 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39328 GAGAGAGCAGTCAAGCCAGTAATCTCACTCCCTAGTGAAAAATGGGTCCTGAAGATTGGG Gene BVV0102_279431 + 1 EMBV3_02517 GK000004.2:107972238-107987836 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00010779 TCONS_00253025 TCONS_00200933 TCONS_00238445 TCONS_00062753 TCONS_00199803 TCONS_00115687 TCONS_00152859 TCONS_00210177 TCONS_00176249 TCONS_00199063 TCONS_00186108 TCONS_00165813 TCONS_00248863 TCONS_00251760 TCONS_00023615 TCONS_00252354 TCONS_00009883 TCONS_00135547 TCONS_00010052 TCONS_00218899 TCONS_00251930 TCONS_00239219 TCONS_00175545 TCONS_00040583 TCONS_00055867 TCONS_00021596 TCONS_00040195 TCONS_00065249 TCONS_00157488 TCONS_00238457 TCONS_00123618 TCONS_00032143 TCONS_00238357 TCONS_00152628 TCONS_00072815 TCONS_00206861 TCONS_00250580 TCONS_00185582 TCONS_00253665 TCONS_00156997 TCONS_00062743 TCONS_00019962 TCONS_00133066 TCONS_00020724 TCONS_00063180 TCONS_00245928 TCONS_00153219 TCONS_00185807 TCONS_00252056 TCONS_00162783 TCONS_00223462 TCONS_00124845 TCONS_00088087 TCONS_00030942 TCONS_00124584 TCONS_00142124 TCONS_00006827 TCONS_00157440 TCONS_00189890 TCONS_00022065 TCONS_00007719 TCONS_00201733 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00066285 TCONS_00179470 TCONS_00222115 TCONS_00056147 TCONS_00054954 TCONS_00070840 TCONS_00154085 TCONS_00063487 TCONS_00251915 TCONS_00030941 TCONS_00047158 TCONS_00050046 TCONS_00240475 TCONS_00249570 TCONS_00124110 TCONS_00048821 83 XLOC_006139 XLOC_131641 XLOC_006330 XLOC_155966 XLOC_122583 XLOC_145112 XLOC_037480 XLOC_121455 XLOC_069856 XLOC_092624 XLOC_128687 XLOC_106028 XLOC_120716 XLOC_112161 XLOC_100653 XLOC_151806 XLOC_154701 XLOC_014282 XLOC_155295 XLOC_005436 XLOC_081770 XLOC_005604 XLOC_132218 XLOC_154871 XLOC_145885 XLOC_105326 XLOC_024399 XLOC_033675 XLOC_012269 XLOC_024012 XLOC_039971 XLOC_095943 XLOC_145124 XLOC_075170 XLOC_018386 XLOC_145024 XLOC_092393 XLOC_044583 XLOC_125381 XLOC_153523 XLOC_111635 XLOC_156604 XLOC_095457 XLOC_037470 XLOC_010640 XLOC_080989 XLOC_011399 XLOC_037907 XLOC_150855 XLOC_092984 XLOC_111860 XLOC_154997 XLOC_099664 XLOC_136762 XLOC_076388 XLOC_052874 XLOC_017192 XLOC_076128 XLOC_086549 XLOC_002389 XLOC_095895 XLOC_115927 XLOC_012736 XLOC_003279 XLOC_123378 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_040999 XLOC_109243 XLOC_135424 XLOC_033950 XLOC_032763 XLOC_042617 XLOC_093846 XLOC_038214 XLOC_154856 XLOC_027294 XLOC_030177 XLOC_147139 XLOC_152513 XLOC_075662 XLOC_028952 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_26794 CAGGAGAGCGACAGCAGCTTTCTGGTCAAGACCGACACCACGGCACACCCATGCTGCTAG Variant GeneID:515589|C13H20ORF27:NM_001046205:1090_cdna 373^634 2 EMBV3_37974 GeneID:515589 13 GENE C13H20ORF27 MGC137204 chromosome 20 open reading frame 27 ortholog EMBV3_03482 ATTCTGCTCAGAGATCAAATCTGCCGTCAAGGAACAGTGATTGGCCAGCCCCAAGGACAG Gene GeneID:533703|C1H3ORF21:NM_001075999:99_cdna Constitutive 0 NULL GeneID:533703 1 GENE C1H3ORF21 MGC138020 chromosome 3 open reading frame 21 ortholog EMBV3_37973 GGTCCCTTCAGCTGTAACGTCATACCTCAGACACAGACCAACATTTTCAGAAGGACTGAG Gene GeneID:789493|COL9A3:XM_002692408:359_cdna Constitutive 0 NULL GeneID:789493 13 GENE COL9A3 NULL collagen, type IX, alpha 3 EMBV3_25950 TTGAATTGGTTTTTCTAGTCTGGGAGGTGGGGACAGACAGTGAGTGTTGGGCACTGTTCC Gene BVT0102_257718 - 0 NULL GK000030.2:107383174-107568780 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16304 TGGTCTCAGTCATCGTGTGGCTGTTGTCGCTGCTCCTGGCGTTGCCCGCTCTCCTTTTCA Gene GeneID:539108|CCR10:XM_002695996:383_cdna Constitutive 0 NULL GeneID:539108 19 GENE CCR10 NULL chemokine (C-C motif) receptor 10 EMBV3_21789 CAAGTCTGTCTGTGCCCCATAGCTGCACAGAATGCTTCACTATCACTAACTGGATATTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36990 TCTACGAGTTTCCCCTGATGGGACTGCCTTTTGCTCAGGATCATGGGATCATACCCTCAG Gene GeneID:535365|GNB5:NM_001099070:89_cdna UTR3_Alt 2 NULL GeneID:535365 10 GENE GNB5 MGC142963 guanine nucleotide binding protein (G protein), beta 5 EMBV3_22078 GCCACCTTATGGGGAGAGGGGCGGTGTCTGGCTGCCCCAGAGCTTGAATTCCTTTGTTAA Gene GeneID:100138973|LOC100138973:XM_002687909:67_cdna Constitutive 0 NULL GeneID:100138973 5 GENE LOC100138973 NULL hypothetical protein LOC100138973 EMBV3_25253 CTGGGCTAAGCACTGATCACACCCTCTTCCAGTCACTCCTGACCCAAGGAAATGAGGGCA Gene BVT0102_127509 + 1 EMBV3_17782 GK000013.2:42269927-42396586 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09813 CAGCCACAACATAAAATCTCTGGAGAAGGGGTGTGCGGACTAGATCAGAGGCACAAAGGA Gene BVT0101_072138 - 1 EMBV3_27097 GK000020.2:23538713-23550825 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35501 CCTCTGCAGGCAGGACAGACACTCAAGCTGGTGTACATTCTCAGACATCATGGTGGAAGA Gene GeneID:100295378|LOC100295378:XM_002698521:136_cdna Constitutive 0 NULL GeneID:100295378 26 GENE LOC100295378 NULL hypothetical protein LOC100295378 EMBV3_16562 CTGTTCTGCCTTTCCTGATGAGCGCGGGGTTTGAGGCACACAGACATGGGGATATTTGTA Gene GeneID:516451|ZNF592:NM_001102036:120_cdna Constitutive 0 NULL GeneID:516451 21 GENE ZNF592 MGC159636 zinc finger protein 592 EMBV3_23775 AAGAGATACAGGCATCTAACCTCCGAGGACATTATCACCTCCGCATGAGCATGGAAAGGG Gene BVV0102_437738 + 0 NULL GK000017.2:50811831-50835986 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05060 TGAGGAGTGCACAGTAAATCTGCGGGATGATGGAGACAGCTATGGTTTCATTACCTACCG Gene GeneID:338446|PPARGC1A:NM_177945:156_cdna UTR3_Alt 2 NULL GeneID:338446 6 GENE PPARGC1A NULL peroxisome proliferator-activated receptor gamma, coactivator 1 alpha EMBV3_12163 TGGGCTGACATTGGTTTCCAGGGTGACGATCCCAAAACAGACTTCAGAGGCATGGGCATA Gene GeneID:515278|ELMOD2:NM_001075705:23_cdna UTR3_Alt 2 NULL GeneID:515278 17 GENE ELMOD2 MGC139980 ELMO/CED-12 domain containing 2 EMBV3_26135 GGTCATGAGCAGAGAAACTTTGACGAGGCTGAGGGATGCCTTATTTCCCTTCCTCACTCT Gene GeneID:513290|TMCO5B:NM_001075609:52_cdna Constitutive 2 NULL GeneID:513290 10 GENE TMCO5B MGC134095 transmembrane and coiled-coil domains 5B EMBV3_09152 ATGTAAGCAGGGCCCAGAAACCTAGCCTGGAGTTCAAAGAGCTTGGGTTACCCCCCAAGA Gene GeneID:510353|ACD:XM_002694822:700_cdna Constitutive 1 NULL GeneID:510353 18 GENE ACD NULL adrenocortical dysplasia homolog (mouse) EMBV3_38916 GTATTATTACAGGCCTTGCACCCCCTTTGCTGCTTCCCTACTGCTCACCTGGGGCAATCA Gene BVT0102_332389 + 0 NULL GK000003.2:14750474-14755581 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168561 TCONS_00168562 1 XLOC_103135 Coding TCONS_00168561 XLOC_103135 Coding Coding MEX3A 3:14721530-14752464 j TSS126394 3553 1 TCONS_00168561_2 343 3 0.885235832282675 0.000350622969003266 0.000283520064555616 0.00016761246650428 0.000127721434201684 0.000102958312848459 0.000142306201679433 6.99303960660553e-09 0.000118010636291561 0.000111780953860327 0.000172820209072094 1.4191084098892e-05 3.50119057257637e-05 0.000156971775568306 3.62687120326926e-06 4.45262527507404e-05 0.000922169725231015 0.000568556990737665 7.76345599171016e-05 8.39594276787008e-05 0.000359764263290143 0.000174430266159202 0.000150120955046952 0.000180355499655859 4.58536125634484e-08 0.00021717218159173 0.000476071902028416 0.00019480062031394 2.75252442863018e-05 1.40628515332643e-08 3.15592193256277e-06 NM_001206290.1 MEX3A Bos taurus mex-3 homolog A (C. elegans) (MEX3A), mRNA. 0.0 2295 100.00 0.357725865465804 NM_001093725.1 MEX3A Homo sapiens mex-3 RNA binding family member A (MEX3A), mRNA. 0.0 3552 83.62 0.918097382493667 TCONS_00168561_2 sp|A1L020|MEX3A_HUMAN MEX3A_HUMAN RNA-binding protein MEX3A; 0.0 641 98.54 0.997084548104956 4 coding 0 0 0 0 -0.237030820572128 0.10094936779591 -0.0151607236425551 0.848540049637037 GTGGCTGGGTGGTTCCTCCCTCCTTCCCGCCCGGAGGCGGGCAGTGCTGACGGCTCGTACTGACGCAGGCCCCTGCGTGTGGGCGGCTGCCTGATCCAGGGTCAAGCACCTCGGCTTATCCACCATCTCTGCACTCCAGGGCAGCTCTGTCTCCAGTCCCACCACGCAAGACTTGCCTTCCTTGACATCTGACAACATTCATGTCACCCCATAATTCATAAGGATCATCCCATTCATCATCCTAAAGCCTGGAGGTAGGGCACTCCATATCATCACTGAGGCTCAGAGAGGGCTGCAAGATTAAGGCTCTGAGGGCCAAGACCAACACCTACATCAAGACGCCCGTGCGAGGCGAGGAGCCAGTGTTCATGGTGACTGGGCGGCGGGAGGACGTGGCCACAGCCCGCCGGGAAATCATCTCAGCGGCCGAGCACTTCTCCATGATCCGCGCCTCGCGCAACAAGTCGGGCGCCGCCTTTGGAGTGGCGCCTGCTCTGCCCGGCCAAGTGACCATTCGTGTGCGGGTGCCCTATCGCGTGGTGGGACTGGTGGTGGGCCCCAAGGGGGCAACCATCAAACGCATCCAGCAGCAGACCAACACGTACATTATCACGCCAAGCCGGGACCGCGACCCGGTGTTCGAGATCACCGGTGCCCCGGGGAACGTGGAGCGTGCGCGCGAGGAGATCGAAACGCACATCGCGGTCCGCACAGGCAAGATCCTCGAGTACAACAATGAAAACGACTTCCTGGCGGGGAGCCCCGACGCCGCGCTGGATAGCCGCTACTCGGAGGCCTGGCGGGTGCACCCTTCCGGCTGCAAGCCCCTCTCCACCTTCCGGCAGAACAGCCTGGGCTGCATCGGCGAGTGCGGAGTGGACTCTGGCTTTGAGGCCCCGCGCCTCGGCGAGCAGGGAGGGGACTTTGGCTATGGCGGGTACCTGTTTCCTGGCTATGGCGTGGGCAAGCAGGACGTGTACTACGGAGTGGCGGAGACTAGCCCCCCGCTCTGGGCGGGCCAGGAGAACGCCACGCCCACCTCTGTGCTCTTCTCTTCCGCCTCTTCCTCCTCCTCCTCTTCCGCCAAGGCCCGCGCTGGGCCCCCGGGAGCGCATCGCTCTCCTGCTGCCTCCGCGGGTCCCGAGCTGGCTGGACTCCCGAGACGCCCGCCGGGAGAGCCGCTTCAGGGCTTCTCTAAACTTGGGGGGGGCGGCCTGCGGAGCCCCGGCGGCGGGCGGGATTGCATGGTGTGCTTCGAGAGTGAGGTGACTGCCGCACTGGTGCCCTGCGGACACAACCTGTTCTGCATGGAGTGTGCAGTACGCATCTGTGAGAGGACGGATCCGGAGTGTCCCGTCTGCCACATCACAGCCACGCAAGCCATCCGAATATTTTCCTAAGCTCCTGGCCCCTGGCCTCCTGGGGCCGCTCCCCAGGGGCCCTTCCTGGAGCTGTTTTCCACTGGGGCCTTTTGCAAATCAGTGGTTTGAGGGGCAAGGTGCTTAGATACTCGCTTGCTGGGGGGGCGGGGAGGGGAGGCGATGGTGGCTGGAGGGCGGGGCCACTTTCAGAGCCTCTGGTCCCCCTATCCTGGAAAGGTTGGGAGGGGGGCCAGGCCGGAAATTTTACTAGAGTTACAACTCTGATACCTCAACACACCCTTCAATCCGGAAGCAGCTAAAAAACTTTTGTTTTGCCAGAGGTGGCCGCTAAGGCATCCTGACTCCCTGCCCGCCCAACTCACACTACCCCTTCCTCTAGGGAGGGGATGGGGAACGGGAGAGGGAGAGTTACCATCTGTATCTAGAGGTGCTCCAACAATCCCCAAGCCTCTGGTCCTGACCTCTGACCTCCAACCACGACCCTTTAGACCCTCCACCACCTTGTATTCTGTTTGAGGATTTGTTCTGGGCTTCCAGCAGTATGAGGGGGTTGGGGCCCTTTCAGAAGTCTGAATGGATTTTCTGAGGGGGAAGGGGAGGAAGTATGTCAATCAATAAAAGGGCTCAGAACTCGTCCCTCCCCACAAAGCTGGGCTAGAGGAATCTGGAGAGGGGTGCTCCTCTGCTTTCCCTACACACTCTCCTCCCCGTCATCCTTCCCTTTGGGTTTTCCTCTCTCCTTAGCTCTGTCCTCCAGCTCTTCTCTCTGCTTCCCCTTGCCGGCTGTCACAACCAGCCCTGCCTGTCTTTTTTTTCTTTCCTTCTCGCCTCTCCTTCTGCTCCATCCAGCTCAGCTTTGGGGGACACTATCCCCTGGGGAGAGGCAGAGGGAAAAAACATTTTGATGGTCCCCTCAATTCCTCTTTGTCATTCGGAGGCCCACTTTTCTCCTCCTCCAAAGAAACACCTCAAATTCTTGATAGAATGTATTCCTGTTCTCAGTGAATATTTGAAGAGAGGACTAATACTGGGGTACATAAAGGGTCAAACCTCCACCCTTATCATCTTTGGGCATTACATGTAGGGAGCAGTTTGGGGGCTGGGTTTTCTGGTGGTGGGATGGGGAGAGCCAGGGTAGTGTGTCTGCTCTTGGGGAGCAGGAAAGAGGCAGTAGGAGATGCTGCTGGAGGGAGGCAGGGTTCCTCCTCCCTTGCAGTGCCCCATTCCCTGCGCCCCTCTCTGGACCTCACCTGAACCCCTGTTAACAAATTAATCATGAAGTCTCTGTCTCACTCATTGAGGAGAGACCTTGTCTTCAGAGAGGGGTCACTCCAGAGCCAAGCAGGACTGGGGTGCAGCCGGGCCTGTTCTAAGAATCATGTATTATTACAGGCCTTGCACCCCCTTTGCTGCTTCCCTACTGCTCACCTGGGGCAATCACCAGCCTCCCACCCTCCTGGTTCCGCTGGCCGGGCTAGGAGGGGATGGGGGATGGGAGTCCCCGGGGGTCCTAGGAGATTCTTGTATATAGTAGGGTGGGACTGTTCTAAGTGATCTCTGAGCCTTGAGGCTCGGGAGTCCCATTCTTCCTGGATGGAGAGGGGGTGCAGGGATGGGGGCACAGAGGGGATTTCCTCCTCTCCTTCCTCCTGTTGTGAATTAACTCACCTCTCCTCAGCCTGCCCCTCCAGACCACCAGCCAGGGAGGGGAGCGGAAGGAGGTCACAGCCAGGAAAACTGGCCTGTGACAACTTCCCTCCTTCCCGCCAATGTGAGCCATCCTGAGATGTCTGTACAATAGAAACCAAACCAAACCAATGGGCACCCCTCGGGCGCCGAGGGGGGGTGGGGAGGGGGGTGGGAAGATGGGATGTCTGTCTGTCGATCCCCTCCCCCTCTCCACTCTACCCACAAAGGCGGAAGACTGTTACACTAGGGGGCTCAGAAAATTCAATCCCACTCTTACTAATTGAGCCAAACCTAGAAACCAACACAAAACACATAGTGAGAGACAAAATAGAGGAGAGAAAGAGAGCATGAGAGGGAGCGAGATAGGCAACCAACACAGAGGAGAGAAAACAAAAATAGAAAAAAAAAAAAAGCAGTTCTTTATAATTTAATATTCTATTTTAATAAAGGCATTTATTACCGTATAAATGTAGCAAAGAACC EMBV3_12534 CTCAATCAGCTTCAGGTCCTCATGATAAACCTCCTTCCGTCTGTTAGACCCAGCAGCGCT Gene GeneID:504987|PYCR2:NM_001075181:17_cdna Constitutive 0 NULL GeneID:504987 16 GENE PYCR2 MGC140031 pyrroline-5-carboxylate reductase family, member 2 EMBV3_34099 CTGTCCTTCGGTGTCACGGCCAGGATGTCCGGCAACCAGGACCAAAGGGACAGAAAGGAG Variant GeneID:407142|COL2A1:NM_001001135:61_cdna 112^318 1 EMBV3_38521 GeneID:407142 5 GENE COL2A1 CB11 collagen, type II, alpha 1 EMBV3_23083 CACAAGCTCCCTGGGGTGTCCTTCTTTGTGACCTGAAATACTTGTGCAAATGTCCCTGTC Gene GeneID:516982|C1QL2:XM_002685435:39_cdna Constitutive 0 NULL GeneID:516982 2 GENE C1QL2 NULL complement component 1, q subcomponent-like 2 EMBV3_27602 ACTGCTGTCCATAAACACTACAGCCTCGAGCAGTGGAAAGAGTTTGCCAGCCAGAATCCT Gene GeneID:515837|GMPR2:NM_001038119:158_cdna Constitutive 0 NULL GeneID:515837 10 GENE GMPR2 MGC134032 guanosine monophosphate reductase 2 EMBV3_42274 CCAGCCTAAGACTCCAGCAGAGGAGCAAGTGACAGGGAAGCCAGACAGTGAATAAATCAA Gene BVT0101_004438 - 0 NULL GK000029.2:16686333-17048268 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24947 AACTCCCCAGAAAAGCTGGCCTAAGCAAGAGAAAAGTTGACCCCTGTCTTTGTGCTCTGC Gene GeneID:386664|NDN:NM_001014982:2_cdna Constitutive 0 NULL GeneID:386664 21 GENE NDN NULL necdin homolog (mouse) EMBV3_06520 AACTACATCTTGGCAGCAGCCTGGACAGTTCAAATGCAAGTGTTTCGAGCAGCCTCAGTC Gene GeneID:526873|CAMK1D:XM_002692061:87_cdna Constitutive 0 NULL GeneID:526873 13 GENE CAMK1D NULL calcium/calmodulin-dependent protein kinase ID EMBV3_38814 TCTGCGCACGTCCTGCCACGTGTTCATGGTGGACCCCGACCTGTTCAGCCACAAGATCCA Gene BVT0102_046987 - 0 NULL GK000006.2:107741170-107850441 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24434 CACTGCTATGTGATCCAATCCCAGATGACCCCCTAGTACCAGAGATTGCACGGATGTATA Gene GeneID:100336400|LOC100336400:XM_002692222:1452_cdna Constitutive 0 NULL GeneID:100336400 13 GENE LOC100336400 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_25559 CAGTCTGAGGAAGGAACCAGAGTTATGGGGAAGACTGGGCAACAACCCAGTTTAGCAAGC Gene GeneID:505958|DGAT2L6:NM_001101861:50_cdna Constitutive 0 NULL GeneID:505958 X GENE DGAT2L6 MGC155162 diacylglycerol O-acyltransferase 2-like 6 EMBV3_43625 TAAACCTGGGAGGAACTCATTTGATTGCTGTTGCCCTATTCCTCAATATGCCATTCTAGG Gene BVV0101_047747 + 0 NULL GK000020.2:49952437-50651844 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34176 AGAACCCTAAAAGAAGGCAAAGCCTTAGGGTTCATCATTTCAGGATCCCTCTCGGTGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12358 GGAGGCTGGGAGGAATGAAGGTGATTGTTAAAGGGTATGGAATTTCTTTTTGGGGTGATG Gene BVV0102_198324 - 1 EMBV3_18586 GK000026.2:22311735-22375028 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11432 TCTCATTGCAGATGTGATCAAGTTAGGGTGAGGCCGTCTGCAGCTGGGCACTCTCTGCCC Gene BVV0102_275414 + 0 NULL GK000029.2:47657617-47692790 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29816 ACACAATCTAGGGGAGTTTGTCAGCAACTTTTACAATTCAGGAGCCATTAGCCAAACTCC Gene GeneID:281478|SCIN:NM_174177:2_cdna Constitutive 0 NULL GeneID:281478 4 GENE SCIN NULL scinderin EMBV3_40580 CTGTGTCCAAGGGCAGGCGGAGATGGATGTCCCAGCTTAAATAGAGGGAAAAGTCACCTT Gene BVT0102_270319 - 0 NULL GK000010.2:13381792-13507073 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016083 1 XLOC_008622 NonCoding TCONS_00016083 XLOC_008622 NonCoding NonCoding - 10:13403451-13404908 - TSS11205 493 1 TCONS_00016083_1 78 0.438133874239351 3 0.663461538461538 0 2.67855693957978e-11 5.63123417377045e-05 1.05723872150765e-10 0 0 0 7.50171934514354e-10 0 0 0 0 0 0 2.47391856723204e-07 0 0 0 1.12376216556447e-11 0 0 0 0 0 0.000196751802764968 1.50169078173356e-05 0.0015415459521382 0 0 0 NR_036555.1 C12orf36 Homo sapiens chromosome 12 open reading frame 36 (C12orf36), 8e-11 71.6 75.83 0.237322515212982 0 noncoding 0 0 0 0 0.0608747738033393 0.683495364792948 0.0482965262011673 0.337131698454626 AATAGGAAAACAAACAAACAACAACAGATGTGGGGAAAGGTGACTTTTCCCTCTATTTAAGCTGGGACATCCATCTCCGCCTGCCCTTGGACACAGATGCTCCTGGTTCTCAGGCTTCAGGGTTTGGACTGGAACGTCACTGCTGGATTTCCTGGGCCTCTGACTTGCAGCTGGAGCCATCCCAGAAGACCTGACAGAGTTCCCAACAGCTGGGGCAACGAGTCCTTCAGAAGGAGGATCTGGTGCTGGAGTGCCCTGACCCCACGATTTGACTCATGGCTCTCACCTCCCCCACCTGCTCCAAGCACAGTCCCTGGAGAGAAGGAAACATAGAGACTGAGCCAACCCTTGTTGTACAGCTTTGAAAAGCCCACACTGAGTTTTCTAGGAATACACAACTACTACATAAATCAAGGGAACATGCATACTTTGTGTAGTTTGGAGTTTTATCAAGAAATATTCCTCTTTCAGGAAATCATGTCAGGTATTTGAC TCONS_00016082 s 5' 21661 TCONS_00016082 s 5' 21804 EMBV3_21327 TCTGCGCGAGATTCGCCGTTACCAGAAGTCCACGGAGCTGCTGATCCGCAAGCTGCCTTT Gene GeneID:616800|LOC616800:XM_002697460:80_cdna Constitutive 0 NULL GeneID:616800 23 GENE LOC616800 NULL similar to histone cluster 1, H3f EMBV3_10028 CTGCAGACAACTTGCACAGGGGGATTTTCTCTCCACATTGGCCTGGTTTGTTTTCCGCAA Gene GeneID:614732|LOC614732:XR_083743:19_cdna Constitutive 0 NULL GeneID:614732 8 PSEUDO LOC614732 NULL similar to DnaJ (Hsp40) homolog, subfamily A, member 2 EMBV3_31888 TTCTGAATCAAATGCCTGTTTCTGCCCTTCCCACAGAAAGAACAGTTACCCTTCCCAAGG Gene BVT0102_385702 - 1 EMBV3_10963 GK000002.2:126965130-126983129 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24073 CCAGCTCCGCGACGCCGCAGCCGCCGCCGATTACGTGGCTACACCACTGGCTGCCCTCCT Variant GeneID:539223|LASS2:NM_001034667:136_cdna 60^233 2 EMBV3_26979 GeneID:539223 3 GENE LASS2 MGC126981 LAG1 homolog, ceramide synthase 2 EMBV3_06974 TGCTGGACACAGAGGAGCCTGTGGATGCCGTAGGGGGCACCGGACGTGAAATGAGCTGGA Gene GeneID:379045|QRFP:NM_198222:10_cdna Constitutive 0 NULL GeneID:379045 11 GENE QRFP NULL pyroglutamylated RFamide peptide EMBV3_25393 ATAATCTCGGCCAGCAGTACCACAGCCCACAAGAAGTCATCGGCAAACGAGGCTCTGATA Gene GeneID:281568|UMPS:NM_177508:11_cdna Constitutive 0 NULL GeneID:281568 1 GENE UMPS MGC137321 uridine monophosphate synthetase EMBV3_05069 AGTGATAAAGGAAATCGGGCATCCCTGTCCAGAAAGCCCTCGGTCCCCAAGACAACCACT Gene GeneID:527829|MAP1S:NM_001102114:86_cdna Constitutive 0 NULL GeneID:527829 7 GENE MAP1S MGC152370 microtubule-associated protein 1S EMBV3_09905 GAAGTTTCAGGCACCCGCAAGAGAGACCTGCGTGGAATGTCAGAAAACAGTCTACTCGAT Gene GeneID:540637|LIMA1:XM_002687274:147_cdna UTR3_Alt 2 NULL GeneID:540637 5 GENE LIMA1 NULL LIM domain and actin binding 1 EMBV3_35553 ACAGAATTTTGGGTGACATTCTTCTGCTGAATCTAACATGGTCTTGTCTATACAATTCCC Gene GeneID:767967|MGC134150:XM_002694957:97_cdna Constitutive 1 NULL GeneID:767967 18 GENE MGC134150 NULL hypothetical protein MGC134150 EMBV3_03788 TACAACTAACTTCTAGCCTCATTGGGGGACCTTCCCCAGTTTCTAGAGGCTCCCCACATT Gene BVV0102_121079 - 1 EMBV3_17469 GK000024.2:35519621-35529295 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138870 TCONS_00138868 1 XLOC_084755 Coding TCONS_00138870 XLOC_084755 Coding Coding USP14 24:35524198-35565134 j TSS103982 2966 1 TCONS_00138870_2 456 0.0566419420094403 18 0.927983388298522 2.0499067603515e-20 0.000284879727888881 2.14388945363539e-28 5.98574326443821e-22 3.70566053247456e-12 0.000497167725285693 5.47750812197125e-42 1.16653582065718e-126 0.000246693402778756 8.98436762168803e-33 3.2778708224699e-22 1.55024130516761e-23 2.20480290277643e-29 4.449051928894e-16 1.5847754241967e-92 0.000161567303120961 1.49667973464862e-28 0.000150976443715591 0.00017787902664078 0.00119064029914168 0.000271595575901475 2.45061855619201e-31 4.75176779248067e-28 2.08884536788552e-29 0.000168632776298089 2.96107318567844e-32 2.85587904907278e-05 2.41696575099623e-28 6.89882863322604e-23 2.38267670467411e-17 XM_005224119.1 USP14 PREDICTED: Bos taurus ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) (USP14), transcript variant X1, mRNA. 0.0 4608 99.81 0.865475387727579 NM_005151.3 USP14 Homo sapiens ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) (USP14), transcript variant 1, mRNA. 0.0 3124 87.91 0.835805799055968 TCONS_00138870_2 sp|Q0IIF7|UBP14_BOVIN UBP14_BOVIN Ubiquitin carboxyl-terminal hydrolase 14; 0.0 909 99.77 0.962719298245614 2 coding 0 0 0 0 0.0259602671413665 0.812212661292192 0.00410274448342136 0.930780935956624 ACATTTGCAACCCAACTCCAGCCAAACAGGAAAAGACAAGTTCTTTCCTGCTTTGATGCTCAAAAGGGTGATTTCCTGAGAGCTCAGATTTTAAATGAACATATCCTGGTTAGGAGGCCAGTGTAACCACAAGCGGCTTTATAAAGAGGGAGGCAGAGGCTCTGAGTGAGAAGAGTTGCTGGGCGGATGCAAGCCGAGGTCAAATGGTGCCTTGGCTGGAGTGGGGCCAGAAGACGAGGAATGTGGGGAGCCTCTAGAATCTGGGGAAGGTCCCCCAATGAGGCTAGAAGTTAGTTGTACCAAAAGTTGGGGCTGTGTGTGTTGAAAACAAACTTAGACTACAAGACTCCCTGGTCATGGATAGAACAAGCAAGCTCAAAAAAATTTCTCTTACAGCATCTGTTACTGTGAAATGGGGAAAGGAGAAATTTGAAGGTGTAGAATTGAATACTGATGAACCTCCGATGGTGTTCAAGGCTCAGCTTTTTGCACTGACTGGAGTCCAGCCGGCCAGACAGAAAGTTATGGTGAAAGGAGGAACACTGAAGGATGATGATTGGGGGAACATCAAAATGAAAAATGGAATGACTGTACTAATGATGGGGTCAGCAGACGCTCTTCCTGAGGAACCCTCAGCTAAAACTGTCTTTGTAGAAGACATGACAGAAGAACAGTTAGCATCTGCTATGGAGTTACCATGTGGATTGACAAACCTGGGTAATACTTGTTACATGAATGCCACAGTTCAGTGTATTCGTTCTGTGCCTGAACTCAAAGATGCCCTTAAAAGGTATGCAGGCGCCTTGAGAGCTTCAGGAGAGATGGCGTCCGCACAGTACATTACTGCAGCCCTTAGAGATTTGTTTGACTCCATGGATAAAACTTCTTCTAGTATTCCACCAATTATTCTACTGCAATTTTTGCACATGGCTTTTCCACAGTTTGCAGAGAAGGGCGAACAAGGACAGTATCTTCAGCAGGATGCTAATGAGTGTTGGGTACAAATGATGCGAGTATTACAGCAGAAATTGGAAGCTATAGAGGATGATACTGTTAAAGAGACAGATTCTTCATCTGCATCAGCAGTGACACCTTCTAAAAAGAAAAGTTTAATTGATCAGTTCTTTGGAGTTGAATTTGAGACGACCATGAAATGTACAGAATCTGAAGAAGAAGAAGTCACTAAAGGAAAGGAAAGTCAGCTTCAGCTTAGCTGTTTCATCAATCAAGAAGTCAAGTATCTTTTTACAGGACTTAAGTTGCGACTTCAGGAAGAAATCACCAAACAGTCTCCAACATTGCAAAGAAATGCTTTGTACATCAAATCTTCAAAGATCAGCCGGTTACCTGCTTACTTAACTATTCAGATGGTTCGATTTTTTTACAAAGAGAAGGAATCTGTGAATGCTAAAGTTCTTAAGGATGTGAAATTTCCTCTTATGTTGGATGTGTATGAACTATGTACACCAGAACTTCAAGAGAAAATGGTTTCTTTTCGATCAAAATTCAAGGATCTAGAGGATAAAAAAGTAAATCAGCAGCCAAAGACAGGTGACAAAGACAGTAGTCCCCAAAAAGAAGTTAAGTATGAGCCCTTTTCTTTTGCTGATGACATTGGCTCCAATAATTGCGGATACTATGATTTACAAGCAGTGCTAACGCATCAGGGAAGGTCTAGCTCTTCAGGCCATTATGTATCATGGGTGAAAAGGAAACACTTTAGATGAATGGATCAAGTTTGATGACGATAAGGTCAGCATTGTAACACCAGAGGATATCTTACGACTTTCCGGTGGTGGAGACTGGCACATAGCTTATGTTCTACTCTACGGGCCTCGCAGAGTGGAAATAATGGAAGAGGAAAGTGAACAGTAATCTTCATTTTAGCTATTTATGCTTAGGTGTGAAATAAATGTTATTTGTTGATCATTTCTATAACCCAGAGCTTTGGAGGAAGATTAGTTTAGGTGGTTTTATGTGTTTCCCCTCATGTGGAACAAGAGAGGGCAGAAGCAGACCACTCTGTGTTACCAACCTAAGAAATTACAGAAAAGAGAAAATTGCCTTTGGACTGTGCTGCCCTGTGTAAAGGTGGCAGGAAGAACTTTTTAAAAAGCTTATTGCTTGGATTAATTTTTAAAAATTATGAGTTGAAATGCCTTTCAACCATTATTACCTTCTGTGATAATTTTTCTGTCTTTTTCAGCCCAAGATTCAGCAATCAGATGTTTATTGCACACCTATTACTCTATTATTTGTTGTTCTTGCATGGTTCAAACCACCAGTGATCCAATAGCTGCCCATCCTTTGCCTTATCTAACACAAATGTTGCCAGGAAGGTGGAAGGAAGTAAGTTTGATCTCATTGTGTAACTCAGTGCTGCGTCCCCACCCCCATGCAAACATGGGTACAATCAAGTATTTGTCCAGCCTGACTGTTGCTGGCTTTTCATGACTTTAAAATAAATTGTGATCAAATAATAGTACATTTGATTATACATTTGTTACTGTGTCTCTGATGTACTATGGTTTGTACATTGAACTTTGCTATGGTTTTGTAGTAATGAACCTTAAAATGTTGACAAGCTCCAGTTGCTTATTTTTAGAAAATGAGGATATTTAATAAAAAAAGAAAAAAGAGGGACTAACAGCTTTTGACCTCAAGTCTTTTGTCTGTTGGAGCTTGGCTGAAGTTCAGATATGTTTAATACTATTATAGTTTCTGCAGATGGTTAATTATGCTCTCAAGCATCTATCTGAAAATAGTATCTTCTTCACCTGCTAGCCTAATACTGTTTAAAAAGAAACACAAAGTTGTGATTGGATAATGAATGCAACCATGTTTATCAGATCTGTTCTTTGGCTCAGTTGGGTGTTTGGTTCTACTCTGTCAACTCCCAACTTCATGTCTATCTCAAAATTTAATACCAGTGATTTTTAGGAGAAATATCAAGAGTATGAGATACT EMBV3_17087 GACCAGGCCACAGAAAATACCTCACCCTCTAATACTCCACACACCTCTGCCAACATTGTG Gene GeneID:532556|MGA:XM_002690801:12_cdna UTR3_Alt 2 NULL GeneID:532556 10 GENE MGA NULL MAX gene associated EMBV3_00816 CCTTCAGAGAAACGCCACCGGCTCTGCTCACAGCATCTAAGTTAGCACACGAGTCAATAA Gene GeneID:531974|NAV1:XM_002694175:618_cdna Constitutive 0 NULL GeneID:531974 16 GENE NAV1 NULL neuron navigator 1 EMBV3_20075 TAGGGAGTGGCGAGGCTGGGATTTGAAGTCAGGCCATCTGCTCCACAGTTATTACTCTCT Gene BVV0102_126311 + 1 EMBV3_11555 GK000013.2:22496406-22813837 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14505 CATTTCTCTGAAAGTGGATTTTGTGGTCTGTCCGGGGAATGGATCCAGCGTGATCGGTTG Gene GeneID:100313404|MIR2299:NR_031036:12_cdna Constitutive 0 NULL GeneID:100313404 12 GENE MIR2299 bta-mir-2299 microRNA mir-2299 EMBV3_39256 CCGAAGGGCAATTGTTCATGCCACCCACCGAGACAGCTATTCTGGAGGCGTTGTCAATAT Gene GeneID:282013|PSMB8:NM_001040480:47_cdna Constitutive 0 NULL GeneID:282013 23 GENE PSMB8 LMP7 MGC126938 proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7) EMBV3_38723 AAGGACGGCGGGCGCCTCTACCTGGACCCCGATACACCCTCCCCCGAGTGGTCAAGTGCC Variant GeneID:524030|GJB5:XM_002686488:576_cdna 507^609 2 EMBV3_40172 GeneID:524030 3 GENE GJB5 NULL gap junction protein, beta 5, 31.1kDa EMBV3_39296 TGCAACTCTCCGGGCGGCCGCACCTGCCAGGCCACAGACCTCCACCAGCACGAAGTGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05389 ACTGAGGAGGATATCAGGAATCAGGAAAGGAGAGTGAAGACAGCAAGAGAGAGACTGGCG Gene GeneID:768027|MBD3L1:NM_001077086:123_cdna Constitutive 0 NULL GeneID:768027 17 GENE MBD3L1 MGC137086 methyl-CpG binding domain protein 3-like 1 EMBV3_05501 GATGCAGTTGCTGTCCGAGATAGAGGAACATAATAAGGGTCCCCTGTCTGCTTGGGTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21173 TGATCCTGGAGAAAGAGGAGCAAAGGGGGAGAGTGGGCTTGCAGACGTCAATGCTCTCAA Gene GeneID:415114|CL46:NM_001001856:263_cdna Constitutive 0 NULL GeneID:415114 28 GENE CL46 CL-46 collectin -46 EMBV3_12956 CTTCTGAGCCATTCACAGCCTCTATCAAAGACACGCACAGAGCTTTTTCCAGGAGATGGG Gene GeneID:534658|WISP2:NM_001102176:1210_cdna Constitutive 0 NULL GeneID:534658 13 GENE WISP2 NULL WNT1 inducible signaling pathway protein 2 EMBV3_32561 TAATGGAGACACGCATTTGCTAACTCATGGCAGAAGGCACCCCATGCCCAATGAGCCATT Gene GeneID:100336767|LOC100336767:XM_002688235:35_cdna Constitutive 0 NULL GeneID:100336767 6 GENE LOC100336767 NULL gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2-like EMBV3_06177 TGTCCTTTGCCTCCCTTTGGCATTTCCTCATCATCTAACCGGGGTCCCTGAACTAAGAGG Gene BVV0101_010640 - 0 NULL GK000008.2:77103430-77106497 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228228 TCONS_00228226 TCONS_00228227 TCONS_00228229 1 XLOC_138456 Coding TCONS_00228226 XLOC_138456 Coding Coding C8H9orf25 8:77103735-77165207 j TSS170217 3577 3 TCONS_00228226_2 167 6 0.941907566169413 0.00108367370404304 1.08577993301715e-11 0.000244567447829883 5.22381164825864e-17 0.000264055417007744 0.000664273451888573 3.87191343335094e-05 0.000313240046012413 0.000933058279943951 0.000644231496132243 4.22209687388364e-05 2.79854080012384e-05 4.89961301272328e-09 3.23221279176411e-15 0.000300206188263265 0.00154827463154958 7.05128443657519e-06 0.00105115224782677 2.90632301548899e-21 0.00226178123616154 0.000547623944714223 0.000653721798190696 0.000481958667418535 0.000250276095919947 0.000172644065015645 0.000531047919807292 0.000285734691139442 0.000181847816371817 2.50687913755821e-06 4.5722474468704e-05 XM_005199260.1 FAM219A PREDICTED: Bos taurus family with sequence similarity 219, member A (FAM219A), transcript variant X4, mRNA. 0.0 6435 100.00 0.997204361196533 NM_001184943.1 FAM219A Homo sapiens family with sequence similarity 219, member A (FAM219A), transcript variant 5, mRNA. 0.0 2809 77.50 0.99496785015376 TCONS_00228226_2 sp|Q8IW50|F219A_HUMAN F219A_HUMAN Protein FAM219A; 7e-98 285 90.27 0.994011976047904 1 coding 0 0 0 0 0.0725854278135274 0.597163879437517 -0.0573451937269018 0.334459014554601 CCGGAAGTGGAGTTGCCGAGTCACCGCAGTGGCTGAGCTGCTGACAGGAGGCGGCGGCGGAGGAGGAGGCGAGGCAAGACCTGCGGCTTTGCCCGGCCACTGACGCTGTAGCGCTAGGCAAGCCGACCGAGCCACGCCGGCCTCAGCCCGCTTGCAGATCTCCTGCCCTGCGCCTAACCCTCCATCTGCCCGACTGGTCCGGGGAGGCCTAGTCTGCACCACCCACCCGGCACCTGGGGCCGCCGCCCCGCGCGGTCCCCGTCGGCGTCCCCGGCCGCGCCCGGCCCCCGGCCCGCTCGCCCGCCGGCACCATGATGGAGGAGATCGACCGGTTCCAGGTGCCCACCGCGCACTCGGAGATGCAGCCGCTGGACCCAGCCGCCGCCTCCATCTCAGACGGAGACTGTGACGCCCGGGAGGAGAAGCAGCGGGAGCTGGCCCGGAAGGGCTCCCTGAAGAATGGCAGCATGGGTAGCCCTGTCAACCAGCAACCCAAGAAGAACAATGTCATGGCCCGGACAAGGCTGGTTGTCCCAAATAAAGGCTACTCCTCGCTTGACCAGAGCCCGGATGAGAAACCACTGGTAGCCCTTGACACGGACAGTGATGATGACTTTGACATGTCCAGATACTCCTCCTCTGGCTACTCCTCTGCTGAGATCAACCAAGATTTGAACATCCAGCTGCTGAAGGATGGCTACCGGTTAGATGAAATCCCCGACGACGAGGACCTGGACCTCATTCCCCCCAAGTCCGTGAACCCCACCTGCATGTGCTGCCAGGCCACGTCCTCCACCGCCTGCCACATCCAGTAGCGGGCGGGGCCGCTGCGGCCGCCGGGGTGGGGCCGCCAGGGGCGAGCTTGGACCCTGCAGGGGCCAACCCCTCCCCTGCTCGTCCACTTGCCCCCCGGGGCCCCGCGCCCCCTACAGCCGCCAACCTCGTAACAGTCATTGCTTCCTCCTATGGTAGGACGTGTACCTCTGTGTGTTCATGGAGCCGGAGAAACCAAAACCGGGTCTCTCTCCACCCAGGGGGGCTGAGGAGGGGAGGGCTGTTTGTTCAGTTACTTGGGGGACCTTGCCCAGCATCCTGCCCCCTCCCTGAAGCCTGTCTAGTGGAGGAAAGGGGTGACTGGACTTCGTGGAGGCTAACGGTAATGAGTAAGGGGCAGGATCACGAAGCCAGGGGTTTGGCTCCACCGCAGTGAAGCCAGGAACCCCCAGCACCAGCCAAGGAAAGGGGCTGGGAGGGAGAAAGGTCCAGGCCAACAGGGTCAGGGCCCAGCCCCACAGAGCCGCCTCCACATGCTCCCTTGCTGGCCCATGTACCATTTGTGTTTCTCCCCTCATCTCCAGATGGGAAGTCTGGCAAAGCTGCCCAGTGGGATATTGTCCCCCATCCATCGGATCACTGCCATCTTCCTCATCTTTGCCCCATTCACCTCCTTCCTTGCTGTCTGGATTGTGTGGCGGGTGAGGTGGGCCTTAGAGACAGCCAGAGTTTAGGTGGTGTGATCCGTCCTCAGCTGCCCCTAACTAACACATCTATCTCTCTGCACCCCTTCCCATGCCCCCCACATTTCTGTTCTGTTCATCTGTCCTGGGCTGGAAGCAGGAGGTAAGGCTGGCCTCAAAAGCCCCATTGTGGTCTTACTCTAGCACAAGATCCTAGAGGCTGTTCCCCAGGAAGAATCTTCAAGAAAGCAAGCCTGGGAGAATACAGTGGCAGCAGGTGTATGGTGGGGATGGCTTGGCAGAATGTGTGTGCACCTGGAGCTGTCAGAGCGTGTGTCTGCATCTCTGGGCTGGGCCTGTCTCTCTAGATGACTGTGGTGACCATGGTGGGGAAATGACTGTGTGACCTGTTAACAGTGTGAGAGGCTGCTCAGCAGTTCAGTGGACCAACAGCCCTGGGCTGGGGGGTCAGAAGTCTGAGTTCTGGTCCTCGCTCCAGCATGCTTCCTCTTACCTCCAACAAGTCAGTTATGTTCTGGGCCTTCTGTTTCCTCCATGGTATAGTGAGCAGCATCTGAAATTATTTTGAAGGTTATTTCAAACCTGAAGAAATTTCTTCACAGGAATTTCCTTGGAGGTGGATAGGGAGGTCTCTGGGTGTCTTCAGGTATACCTGGGGTCTTCCTGAGCTGCATGTCTGTGTGGAGAAAAGAGGGGCAAGTTCCTGTGGGACCTGTGTATGTCTGAATACATGTGGATCTTTGGGGGAATGTGAGTGTGTGTGTCTGTGAATGTATATGTATATGTGGGTATCTATTGTGTGTGTAGCTGTACCTGTGTGTGTAACTGTACCTACGTGTGTAGCTGCATACAGTGTATAGCTATATCTATGGGGTGTGTGAGAGTCAGCATGTATGTACCTACTGCTGCTTCTGCCACTGTTACTCATTGGTGGAGGGGCGGAGGTGGTGGCCAGAAAAGCTGAGGATGAAAATCAAGAGGGAGGAGGGGACCAAGGCCCTGTCCTGGGCCTGGGCAATACAGACCTGCCCCAGGTGAAGAAAAACGAAAGCTCAGATGGCCTACACCCGCTCAGGTCTCTGCTCCTTGAACCTCATATCCCAGGGCCAGTCCTCAGGCTGACCCCATCCCGCACACGCTGGCCAGTCCACTCTAATACATACCACTCACATGCTGCAAGTGTGCGCAGGCCACACCCACAGCCCAGTCCCTGGCTGCCATCCTGGGAGGCTGGAAAGGGGAGAGGGCAGAGAGAAGAGAGAGCAAGGCTGCTGGCTTAGGAAGGGTATCACCTCTCCCTGCACCACACCCAGGGGCTGCCAGCTCCCTTCAACTTCTCCAACCCAACCCCACCCCCTCTTAGTTCAGGGACCCTGGTTAGATGATGAGGAAATGCCAAAGGGAGGCAAAGGACAGAGAAGTCAGCTGCAGGACTCACATGGCCCAGACTGGCCCCCATCTGAGCCCATTGCTCCCACCCTGATCAGCAGACCCACCCCCTGTCATCTGGGCACCAGAGCCATGCTTCCTACTACCACCACCCCAGGCTCCTTGACTCACCCTTCAAGAACACGGGTACCTCCTCTTTTCCAGGCAGGGCCCCCACCAGGGCTCATTTAGACTGCTGCCTTTGCTGCTGACATGCTGTGTGACTCTGGCCCACTGCTCAACCTCTCTGGCCCTGAGGAACAAGGGAAAGGCTCCCTCCCCACAAGATATACCTAATCCCCTGGCAGACAGGGGCTTCTCGCTGAGGCCATGTGGTGGAGAGAAGTAGGAAGCTGGTGGCTAGTACCCTCTGGGTGTAGGGAGAGTGCGCAGTTCCCACCTTCCTACCCAGGAGGTTGGAGGGGAGAACGGAGGCCTTGGTTTGCCCCTGTCGCCCTCCCCCTTGTAGATACTGCCTTAACACTCCCTGCCCTCAGCACTGGCTGCCACCCAGCCAGGTTTCTCCGTGCTCACTAATTTATTTCCAGGAAGGTGTGTGGAAGACATGAGCCGTGTATAATATTTTTTTTAACATTTCCATCGCAGTATTGACCATCATCCTTGGTTGTGTATCGTGTAACACAAATAATGATATTAAAAGCATCAAACAA EMBV3_01188 TCTGGGAGGCGAGGAAGCCTCGTTTGAAGTCCCGCGCCTGCCGCTCCAGCCAGAGCTCCA Variant GeneID:535887|PANK1:XM_002698345:54_cdna 141^617 3 EMBV3_03809 GeneID:535887 26 GENE PANK1 NULL pantothenate kinase 1 EMBV3_07620 TTGATTGAACACCTGGAAGTAGCAATAAAGGGTTTAAACTTCAGTGGTGCTGATCTTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23226 CTCTAAGCAAATTGATCTTAGGCAAAGCCCCACCTGTGTAGGCATGTGAACTCTCATCTG Gene GeneID:281287|LYZ1:NM_001077829:10_cdna Constitutive 0 NULL GeneID:281287 5 GENE LYZ1 NULL lysozyme 1 EMBV3_20426 CAGCCTTAACTCTGCAGCCTTTGTGCCCATCACCAGCTCCACAGATCCCATTCACACTAA Gene GeneID:538422|TTLL5:XM_002691095:230_cdna Constitutive 0 NULL GeneID:538422 10 GENE TTLL5 TTLL10 similar to tubulin tyrosine ligase-like family, member 5 EMBV3_01194 GGATAAGTAGTTTTTAGCCAGAGGCAGTGGAGGGTGGCAGGAAGAATGGGAGTGTGTGTT Gene BVV0102_206367 + 0 NULL GK000022.2:48302508-48307241 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12141 CCTGCCCAGATCCTGGCTGAGTTTGTGATGAAGCAAATGGCCATGGAAAAACTCAGAATA Variant GeneID:514564|ZWINT:NM_001040529:2_cdna 170^460 1 EMBV3_35651 GeneID:514564 26 GENE ZWINT MGC134448 ZW10 interactor EMBV3_10877 AGAGCTCCTCTTTCTTAGTGAGGTCAGCTTGGGTAGAGCTTATGGCTCAGCAACGGACTA Gene GeneID:282378|STXBP1:NM_174619:1_cdna Constitutive 1 NULL GeneID:282378 11 GENE STXBP1 MGC140579 syntaxin binding protein 1 EMBV3_33165 GGAGTTAAAATTCCCCCTAATCTGATCATCTACCCTGGCCTTGGGCTTTGTGCAAACACA Gene GeneID:540308|POLR3A:NM_001083750:389_cdna UTR3_Alt 2 NULL GeneID:540308 28 GENE POLR3A MGC137470 polymerase (RNA) III (DNA directed) polypeptide A, 155kDa EMBV3_19032 TTGTGGTCAGCACTCAGAACACTGTGGGTAGGCAGAGCTGGAACCAATGTCCACAGATAA Gene BVT0102_010311 + 0 NULL GK000001.2:83091985-83201762 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004294 TCONS_00004297 TCONS_00004292 TCONS_00004293 TCONS_00004296 TCONS_00004298 TCONS_00004300 TCONS_00004295 TCONS_00001362 TCONS_00004299 2 XLOC_001009 XLOC_000338 Coding TCONS_00001362 XLOC_000338 NonCoding NonCoding - 1:83094023-83095022 - TSS692 999 1 TCONS_00001362_1 69 0.233233233233233 1 0 0.000578240205890772 0.000175678589181163 0.000122960800573774 7.08324136118309e-06 1.68925769597451e-74 0.000141026012517227 0.00013457481842395 0.000512404298936525 0.000592164053773951 0 2.69029131628988e-11 0.000103798204912737 1.12837845146856e-31 7.53386626104999e-05 4.91101288176137e-05 0 0 0 0.000190459947828251 0.000886578872289327 7.65270569274373e-05 0 0 5.03424262889959e-05 1.53780698068709e-15 7.73219558179996e-07 1.83164753368451e-74 1.25796108801969e-09 0 0 XR_225785.1 LOC101907683 PREDICTED: Bos taurus uncharacterized LOC101907683 (LOC101907683), 0.0 1802 100.00 0.998998998998999 0 noncoding 0 0 0 0 -0.491599097245825 0.139243748638612 0.042221125016495 0.465257010917022 ACTAACAACTACCATTTATTAGACATCTGCTACAGGCCAAAAGCATTCCCCTTTCCTTTTCACCACCATATTGCAAAGTTTGGTATTATGAAATACCTTCATTTTACAGATATTAATACTTGCCATTTATTCAATACCTAATATGAGCCAGCTTTTTAATGCTTTACATATGTTTTAATGATTTTTATAACAATCTAACAGGATAGATGCTATCTGTTCCATTTTGAACTGTGCAAACTGAAACTCAGAGAAGCTATAAAGTTCTCATAGATAGCATATGACATAACAAGGGTTGGAACTGAAGCCTGACTGAGTCAAAACCCCACAGCTTTTCACTGTTACACATTTCCTTCTTTTTGGAACTCCTTTCAGACTTGGGGACTTATGTTCTTTCTTGCAAACATGGCTATCTCTCTGGAAATGCAAACAAGGATTGTATAACCAAGGTAATTAGGACAAGACTGGTCTGTGAGAAGGTAAAAAGGAGGTTAAAATAAAGTTGGAGAGTTATCTGTGGACATTGGTTCCAGCTCTGCCTACCCACAGTGTTCTGAGTGCTGACCACAATGTGTAGAATGTGTAGCTTTACTCAAATTCAGCACGTTTTGTTCTTATAGGCCATGTTTCCTCAATCTTCGTTAGTCTGCTCTCTCCATTAAGGCTCAAATTAAGTCTTTCATGCCATGAAACAATCATCTACCATTTGTGAACCTGCAAATAGTCCCAGGTTGCTTCCAGATGGTACAGAGGGCTGGCAGAACTCATACCCTTGCCTCAGGATGAAAGACCTCCCATGTCACAGATGCCATCATCAGCTTCTCCGAAGTACTAAAAGTGTGGCCTCTGGGCCCATGTGTAGAGCAGACCTTGGCCATGGTGAGGGCAAGAGATGAATTCCCCCATGGATTACGGTCACTCACATGAGGGAGAAGGAAGGCCGGGATCCCTGGTCTTCTTTCCCTTCAGGCACAAACAGAACTAGATCTTCCTGGGTGAAAC TCONS_00001361 s 3' 2040 TCONS_00001361 s 3' 2040 EMBV3_23359 TGGAAATCCCTACGTATACACACACTCGCTCTTGGCGGTCCCCAAGTCACAGCCACTGTT Gene GeneID:506374|EPS15L1:NM_001101871:26_cdna Constitutive 0 NULL GeneID:506374 7 GENE EPS15L1 MGC166040 epidermal growth factor receptor pathway substrate 15-like 1 EMBV3_16964 TCGGCATAATAGGATCCACACTGGAGAAAAGCCCTATGAGTGCAAAGAACGCGAGAAGGC Gene GeneID:514021|ZNF599:XM_002694925:6_cdna Constitutive 0 NULL GeneID:514021 18 GENE ZNF599 NULL zinc finger protein 599 EMBV3_25315 GAGCTCCTGCCGCTGCCGCAGCCTCAATCTCGCCGCCGCCTCGCCGCAGAAGTATCTCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16240 ATCATGATCAGCACCATGGGCGTCGTCTCCATGAGCATCTCCTACTGCCCCTATGCCCTG Gene GeneID:520630|SLC45A4:XM_002692571:250_cdna UTR3_Alt 2 NULL GeneID:520630 14 GENE SLC45A4 NULL solute carrier family 45, member 4 EMBV3_31216 GGCTCCGTCTCAGCCTCTGAAGTCCTGAACCAAAAAAGCACTAATTTCAGGGAACGAAGT Gene GeneID:789713|RALGPS2:XM_002694159:571_cdna Constitutive 0 NULL GeneID:789713 16 GENE RALGPS2 NULL Ral GEF with PH domain and SH3 binding motif 2 EMBV3_30372 CTGCTCCTCCCACCTCCTGGTGGTCACCTTGTACTACTCCACCGTCATCTACACTTACAT Gene GeneID:532031|LOC532031:XM_002698595:9_cdna Constitutive 0 NULL GeneID:532031 26 GENE LOC532031 NULL similar to olfactory receptor Olfr527 EMBV3_29137 ACACATCCTCTCTAGAGAAGGGGGCTTGGGGAGGAGACTCTTCCAGAAAACCAGGAGGGT Gene BVT0102_239337 + 0 NULL GK000002.2:132657393-132691771 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106917 1 XLOC_062935 Coding TCONS_00106917 XLOC_062935 Coding Coding FAM43B 2:132690651-132692743 o TSS78596 2092 1 TCONS_00106917_1 323 1 0 0 0 0 0 0 0 0 0 0 0.000188810074889468 2.84506858038433e-05 0.000369191283173426 4.11466041033982e-05 0 9.08156771252761e-11 0.00333300834781219 0.00121422028766094 0.00260264122969637 3.2523032071438e-11 0 0 0.00393557700481572 0.00248646098877993 0.00245218701127013 0 0 0 0.000500461363522595 0.000245979285392092 0.000224165783993215 XM_002685725.2 FAM43B PREDICTED: Bos taurus family with sequence similarity 43, member B (FAM43B), mRNA. 0.0 1884 100.00 0.498565965583174 NM_207334.2 FAM43B Homo sapiens family with sequence similarity 43, member B (FAM43B), 0.0 1865 79.80 0.997131931166348 TCONS_00106917_1 sp|Q6ZT52|FA43B_HUMAN FA43B_HUMAN Protein FAM43B; 0.0 548 90.63 0.996904024767802 1 coding 0 0 0 0 -0.0627738464230205 0.590976038383993 -0.0278136346292078 0.590516142014234 ATGCTGCCCTGGAGGCGTAACAAATTCGTGCTGGTGGAGGACGACGCCAAGCGCAAGGCCAAGAGCCTGAGCCCGGGGCTCGCCTACACGTCGCTGCTCTCCAGCTTCCTGCGCTCCTGCCCGGACCTGCTGCCCGACTGGCCGCTGGAGCGCCTGGGCCGCGTGTTCCGCAGCCGGCGCCAGAAAGTGGAGCTCAACAAGGAGGACCCGACCTACACCGTGTGGTACCTCGGCAACGCCGTCACCCTGCACGCCAAGGGCGACGGCTGTACCGACGACGCCGTGGGCAAGATCTGGGCGCGCTGCGGGCCGGGCGGGGGCACCAAGATGAAGCTGACGCTGGGGCCGCACGGCCTCCGCATGCAGCCGTGCGAGCGCAGCAGCTCGGGGGGCCCCGGGGGCCGCCGGCCGGCGCACGCCTACCTGCTGCCGCGCATCACCTACTGCGCGGCGGACGCGCGCCACCCGCGCGTCTTCACCTGGGTCTACCGCCACCAGGCGCGCCACAAGGCCGTGGTGCTGCGCTGCCACGCCGTGCTGCTGGCGCGGGCGCACAAGGCGCGCGCCCTGGCCCGCCTGCTCCGCCAGACCGCGCTGGCGGCCTTCACCGACTTCAAGCGCCTGCAGCGCCAGAGCGACGCGCGCCACGTGCGCCAGCAGCACCTCCGCGCCGGGGGCGCCCCCGCCGCCTCGCTGCCCCGCGCCCCGCTGCGCCGGCTCCTCAACGCCAAGTGCGCCTACCGGCCGCCCCCCGCCGCCGAGCGCGGCCGCGGGGCGCCGCGCCTCAGCAGCATCCAGGAGGAGGACGAGGACCAGGACGAGGACGCGGGGCCGCGCGAGCGGCCGGAGGTGCTCAGCCTGGCCCGCGAGCTGAGGACGTGCAGCCTGCGGGCCGCCCCGGCGCCTCCGCCGCCCTCGCAGCCCCGCCGCTGGAAGGCCGGCCCCCGGGAGCGAGCGGGCCAGGCGCGCTGAGAGCCGGAGGCGGGGGGCGCGGGCGGGGGTGATGGACAGGCCTCGCGGCCCCAGACCCGGCCGGCCTGACGTAGAGCCTCCGGCCTCGGCCCTGCCCGCTACGGCTCCCCCGTGGTCCCCCCACCCCGCCCTTGCCTCCCTCGTGGTCTCTGTGGCTGTCCGCCCCGCGCCTCATCCTGGCTCAGGGTGACGCCTGACATGCCCTTGAGTGTGCGGGGCGGCGAGCTGGGGGAGCAGCCCTTTTACGTGTTCGCCCCCCACCCCCAGAGCCTGCCGGCGCCCTCCACTGTGGAATTGCCCCCATGCTTAACACCATGTTGCTTTGCCCATAAGCCACGCCCTACCTCCCCACACATCCTCTCTAGAGAAGGGGGCTTGGGGAGGAGACTCTTCCAGAAAACCAGGAGGGTGGCCTTGGATCTTGGCCCCCAGGGGAGACAGTGGGTCTGCCCGTAGCCAGGCTGGCCTTCCTGGAGAGACCAGCCCTAGGCAGGCATTCTTACAGCGGGAAGAACAGTGGCCCCGGAGAGCTGAGGCCAGGCCCCAGGTGGCACCTGAGTACTGCCAACCCACACAAGGAAGAGTGCCCAGCCTCTGTGCCTGGCCTCGCCACCCCTTGGAGGACTTCTGGGACTTCGCTGCTCTGCCTGTGGAGAAAACGGGGGTGTTCCTACCACCCCCAACTACAGACGGCCCAGGAACAGCTCTTTGCATCAGGCCGCTGCCCAAGCCTGTGTCCTGGCACCCACAGGACCCCTCACCCACCCTGTCTTTCTGCATACAAATGTGTGTGGGTCCCCGCTCGGTGCCCCACAGCTAGGACCAAGACGTGGCCTCCAAGGGAGGTAAGAGGGCATCTGGCAGGTGTTTGAGGCACTGACCACCCAGCAAATGGACAGGGGAGCGATGTCCCCAAGCCAAGGCTTGTCAGAGCCGGAGGGTCCTGACAGCACCTGGGTGCTCACAGCAAGATGAGGCCGGAGAGTGCGGTGACGCCACTGGGGGAGCGGGCCCCTGCCCACACGTCTTTTAACAAGGTCACTAAAAGCCCAAAGATCTATGTGTTACCAAATGATCATTGTAAATAAACCATTCCTGCTTTTTCAGCCTGTCACCACTC TCONS_00106918 s 5' 0 TCONS_00106918 s 5' 0 EMBV3_06455 ACGTGAAGGTACTGGACTTTGAGCACTTCCTACCCATGCTGCAGACTGTGGCCAAGAACA Gene GeneID:281341|MYL6:NM_175780:893_cdna Constitutive 10 NULL GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_15222 TCCATGATAAGCAGGGAGTGTATCTGGGGATATCAGTCACCTTTGGGGTTGCTGTGTACA Gene BVT0102_109345 + 0 NULL GK000011.2:24806737-24824237 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024422 TCONS_00024423 TCONS_00024418 TCONS_00024421 1 XLOC_014503 Coding TCONS_00024418 XLOC_014503 Coding Coding EML4 11:24653662-24808501 j TSS17926 5626 1 TCONS_00024418_5 981 23 0.963813792479882 0.00090598365566072 1.13441109618486e-07 0.000906764817181314 0.000452295728938342 0.000679932478909451 0.00028790935846221 0.000667321893846346 0.00109836926072553 0.00142278082416928 2.6172149121954e-10 8.79075160036508e-08 1.39215284081745e-13 2.03991274233716e-05 0.000134171068009188 0.000219385312914444 0.00256095723273438 0.00187938616886735 0.00277948631865042 0.000823878329201362 0.000338366768088239 5.44353084941795e-07 1.00572830797903e-08 0.000679533483073573 0.00178382613044534 0.000236820798253422 0.000448920472945481 0.000202991597873332 0.000629134125252896 0.000334742191839397 0.00188632972692532 XM_005212657.1 EML4 PREDICTED: Bos taurus echinoderm microtubule associated protein like 4 (EML4), transcript variant X2, mRNA. 0.0 9773 98.97 0.97493778883754 NM_019063.3 EML4 Homo sapiens echinoderm microtubule associated protein like 4 (EML4), transcript variant 1, mRNA. 0.0 6689 86.74 0.980447920369712 TCONS_00024418_5 sp|Q9HC35|EMAL4_HUMAN EMAL4_HUMAN Echinoderm microtubule-associated protein-like 4; 0.0 1850 93.25 0.99592252803262 2 coding 0 0 0 0 -0.118409741825125 0.417542780824792 0.0265819697791402 0.63240472837914 CCGCGGGACCCCGCCTCCGGATCGTCACGTGGGAGGCGGGGTCGGAAGCGTGACAGCGTGCGCGGGGGCGGTGCTACCACTGCGCGCGGGCGCGGGGGCGGGACGCGGCGCGGCGCTCACGGCTGCTGTCTGGGACGGAGGCAGGGCAGGCGGCGGAGCGGCGCGGCTCTCAACCTGACGGGGAAGTGGTCCCGGCGGCCGCGGCTGACTGCCCCGGGGCGCACGGGCCGACGGACTACGGAGGCGGGAGCCGAGCCGCGCGTCCGAGAGAGCGAGCGGGTCAGGCTCAGCGTCGGCCACCCTAGTCGGTCCGCTGAATGAAGTGCCCGCCCCGCTGAGCCCGGAGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCGCCGGCAGCCTCGATGATAGTATTTCCGCTGCAAGTACTTCTGATGTTCAGGATCGCCTCTCAGCCCTTGAGTTACGAGTTCAACAGCAAGAAGATGAAATCACAGTGCTAAAGGCAGCTTTGGCTGATGTTTTGAGGCGTCTTGCCATCTCTGAAGATCATGTAGCCTCGGTGAAAAAATCAGTCCCAAGTAAAGGCCAGCCAGGCCTTCGAGAAGCTATTTCTATGTCCTGTATAACCAACGGGAGTGGTACAAACAGAAAACCAAGTCACACCAGCTCTGTCTCAATCGCAAGAAAAGAAACTCTTTCATCTGCTGCTAAAAGTGGTACAGAAAAAAAGAAAGAAAAACCACAAGGACAGAGAGAGAAAAAAGAGGACTCTCACTCTAATGATCAAAGTCCACAAATTCGAGCATCACCTTCTCCCCAGCCCTCTTCACAGCCTCTCCAAATACACAGGCAAACTCAAGAAAGCAAGAATTCTACTCCCACCAAAAGCATAAAACGACCATCAACAGCTGAAAAATCACATAATTCATGGGAAAATTCAGACGATAGCCGTAATAAATTATTGAAGGCAGTTTCAACATCAAAATTAATATCAAAAGTTATAAAAAATACAGACAAGCATAAAGATGTCATCATCAACCAAGAAGGAGAATACATTAAAATGTTTATGCGAGGTCGACCAATTACAATGTTCATTCCTTCTGATGTTGAGAACTATGATGACATCAGAACAGAACTGCCTCCTGAGAAGCTCAAACTGGAGTGGGTATACGGTTATCGAGGAAAGGATTGTCGAGCTAATGTTTACCTTCTTCCTACCGGGGAAATTGTTTATTTCATAGCATCCGTAGTAGTACTGTTTAATTATGAAGAGAGAACTCAACGGCACTACCTGGGTCATACAGACTGTGTAAAATGCCTTGCTATACATCCTGACAAAATTAGGATTGCAACTGGACAGATAGCTGGAGTGGATAAGGATGGAAGGCCCCTGCAACCCCATGTCAGAGTGTGGGATTCAGTTAGTCTTTCTACACTGCAAATTATTGGACTTGGAACTTTTGAACGTGGAGTAGGATGCCTGGATTTTTCAAAAGCAGATTCAGGTGTTCATTTATGTGTTATCGATGACTCCAATGAGCATATGCTTACTGTGTGGGATTGGCAGAAAAAATCAAAAGGAGCAGAAATAAAGACAACAAATGAAGTTGTTTTGGCTGTGGGGTTCCATCCAACAGATGCAAATATCATAATAACATGTGGTAAATCACATATTTTTTTCTGGACCTGGAGTGGCAATTCACTAACAAAAAAACAAGGAGTTTTTGGGAAATACGAAAAACCAAAATTTGTGCAGTGTTTAGCTTTCTTGGGAAATGGAGATGTTCTTGCTGGAGACTCAGGTGGAGTCATACTCATATGGAGCAAAACTACTGTAGAGCCCACACCTGGGAAAGGGCCTAAAGGTGTTTATCAGATCAGCAAACAAATCAAAGCTCATGATGGCAGTGTGTTCACACTTTGTCAGATGAGAAATGGGATGTTATTAACTGGAGGTGGGAAAGACAGAAAAATAATTCTGTGGGATCATGATCTGAATCCTGAAAGAGAAATAGAGGTTCCTGATCAGTATGGAACAATCAGAGCTGTAGCAGAAGGAAAGGCAGATCAATTTTTGGTCGGCACATCACGAAACTTTATTTTACGAGGAACATTTAATGATGGCTTCCAAATAGAAGTACAGGGTCATACAGATGAGCTTTGGGGTCTTGCCACACATCCCTTCAAAGACTTGCTCTTGACTTGTGCTCAGGACAGACAGGTGTGCATGTGGAACTCAGTAGAACACAGACTGGAATGGACCAGGCTTCTAGATGAACCAGGACACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAGGCAGGTGGTTTGTTCTGGATGCAGAAACCAGAGATCTAGTTTCTATCCACACAGACGGAAATGAGCAGCTTTCGGTGATGCGCTACTCAATAGATGGCACCCTCCTGGCTGTAGGATCTCATGACAACTTCATTTACCTCTATGCCGTCTCAGAAAATGGAAGAAAGTATAGCAGACATGGAAAGTGCACTGGACATTCCAGCTATATCACACACCTTGACTGGTCCCCAGACAACAAGTATATAATGTCTAACTCGGGAGACTATGAGATCCTGTACTGGGACATTGAACATGGCTGCAAACTAATGAGGAATCGATCAGAATGTAAGGACATCAATTGGACGACATACACCTGTGTGCTAGGCTTCCAAGTCTTTGGTGTCTGGCCAGAAGGATCTGATGGGACAGATATCAACGCGCTGGTACGATCCCACAACAGAAAGGTGATCGCTGTTGCTGATGACTTTTGCAAAGTCCATCTGTTTCAGTATCCCTGCTCCAAAGCAAAGGCTCCCAGTCACAAGTACAGTGCCCACAGCAGCCATGTCACCAATGTCAGTTTTACTCATAATGACAGTCACCTGATTTCAACTGGTGGAAAAGACATGAGCATCATTCAGTGGAAACTTGTGGAAAAGTTACCTTTGCCTCAAAATGAGACTCTAGCGGATCCTACACTCACCAAAGCCCCTCCCTCTTCCATCGAGAGTGTGGTGCAGTCTGATACCCCCACTCCGCCTCCTTCCCAGCCCTTAAATGAGACAGCTGAAGAAGAAAGTCGGATAAGCAGTTCTCCCACACTTCTGGAGAACAGCTTGGAACAGACCGTGGAGCCCAGCGAAGACCACAGTGAGGATCAGAGTGAGGGGGGCAGCGAAGACCTCGGTGAGCCTGTTTATGAAGAGCTAGCCAATGAGCTAAGCGAGGAGCAGAGCAAAGCCGCCCTTCCCGGGGACCAGCAAGACCCCTCATCCCTGTCCTAACACCAGGACTTCAGTGCGATTCACTTTTTCCTTCAACTGCATGATAGCAGAGTTCAGATAACATGCCGAGAAGTGATGAAGAATCACTATTGATGGAGTTTTGGTTTCCACGTAATCTGTTTTCAACAATCTCATCTTCCGTCTCTTAAATGCAGTCAACCTAAAGGTTCGGTTTGACGTGTGTTGAAAATTAACCAAACTTAATAGTAGGAAAAGACTGAAACATTGATTATGTCTCAGAAATTACTGTGTATGTGAGTAGTATGATGTAAATACTGGAAACAAAAACAGCAGTTGTATAGATTTAAAAATAAACCCCTCGTTATCTGAACAGGTTTCTTCAGGAACAGCCAGAGGCATCACAGACACTGTCGCTCATCTGTTCATCTACTGGCTCAGACTGTGCTTTTTTTTTTTCCTGATGCTGAAAATCAGAAAAACAAAAACCAAAAAAAACTCTCACTGAGACCCTCCCACCCCAGATATCTAGTGGAAATTTTTAGTTAACGAAAACTTCAGTATCGCTCTGAGCAGTGGTATGGCCTTCCTGAATAATAACACCATTTTCTCATGCTGCCAGCAGACGTCCAGACGTGCTTGTTAGTCTACTATGTAGGTGCTGCCTTTTCTAAGTCAGAGTGAGGAACAGTCCCTGAACTTCCTGTGTGCAGATCTATTTTATCTTAGAATTAAGAAAGCAGTGGTTTGTTAAAGAGCTGTTAATGTATATTAAACCATTGATGGTCAGAAATAATGGATTCCGCCAAGGATCCCTTTACTGGCCTAAACATTTTCAAGTGAATGGAAGAAAAAAAAACCACATGCCTATAAAACGAAACTTGGCTAATTTTAGCTTAGCCTTCATCATAATTTGTTCCCTCAATAACAAATATTAATACAGTAAGTTTAAATGATTAAATTGGTGCTTGAAATCCATTGGTTTAGTTGTAATTTTTATACAGATTGAGGGATAAAATAACAAATTGCAAATTGTTTTTTACAGAAGTGTGACAGTAGTCACAGTGATTTTTTATAAATTGCATACTTAATAGACTTCCTATATATATGGTGATTTTATCTGGTGGAGTTGCTTTAAGCCTTGCAGTTCTGAGTGACTATCCTCTGCTACTGGGGGCAGTGCATGTATTTTTATGCAGTGGATAGTTTTGGTTTTTTGTTTAAGTTTTGTCAGACAATTGTTTTTCTTAAGTATGTGTTTCCTATTTTCAAAATAATTACTGACAAATATGCATTTCCTATATATTTGTTTCTACTTTGATTATAAAAAGACTTATTTTTTAACTTGCTGCATTGTTTGATATCTTTTTGTTGTTGTTAGATCATGTTTAGAAACTTCAGATGAGTTCAGAAGTCTTAAGTATGCAAGTGTTTACGTGATTGTGCCATTCCAAAGTGCTTCAGAACTGTCATTCCCTTCTGTCTTCTCAGGAGTAATACAAGTCAGGTATTTCATCATCTGGTAACATACAGACTCCCGTGAACGCCCAAGGACACTCACCACATTTGTATTCAGATGCTGTATGTAGGGTGTGGGTGTGTGTGAAGGGGTGAGTGGGTGTAGACACTTACTCTGTGTGTCTCTATAAGAAGATACGTGCCACAGTGAAGATACTCAGTGTGTATCTCTGTGTATAGATATATGTTGTGTATATCTCTTTCCTTTTGTTTACAACTGTTCAGAAAAAAAACCTCAAAGCAGTTCTCTTCACAAGAGAGACTCCAAGCAACCCATCATTTTTCAGTATGTTTATACATAATTATCAGAGGGCAGCAGCAGTATCAGGCATATATTTTTGCCTGTTAGCTGTGGTGATTGAATCATCAGGTCAGCATGTGCTAGACCCTGCAAAATAATAGGAGATGAACAAGTAATTCTAGAAGAAGAAAAAAGCATTTTGTAAAGTACCTGGGGGATACCGCTCTCCATGATAAGCAGGGAGTGTATCTGGGGATATCAGTCACCTTTGGGGTTGCTGTGTACAATGAAATTTATATTCGTGATATTTGTGATATCTTGGGTGGTAGTTTCAAAAAGACACTACTAATACGCAGAAAGCGTTCCAGCTCTCTATTGCTGGCAACTACTGTTTAACAGTCAATTAAATCTGTGATTATGGTTGGAAGTGGGTGGGATTATGAAATTGTAGATGTTTTTAGAAAAACTTGTGAATGAAAATGAATCCAAGTGTTTTATGTGAAGATGTTGAGCCATTTCTATCATGCATTCCTGTCTTATGACAGAAAAATTTGAAGATTAAAAAATAAAATAATCAAAATGTTTCATTTGTCTCTC EMBV3_28199 CCGGCCATAGAGTATTTTAATGGCGGCCCTCCTGCTGTCGAGAGCACCACGTACTCGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16494 GCCTTGAAGAGCTAGTATTCTGTTGGGGTGCAATCAGGACCCAGCTAGTACATACAGTTG Gene BVV0102_240212 + 0 NULL GK000003.2:15528094-15567307 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11602 GCGTCATGCTCAAATTGGTGGAAAAACTCGACATCAGACACCCTGAAGAGCTTTCTCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00231 TCAGCTCCCGCTCGGCTCTATCACAAAAAGATTCAAGTGGATGAAAAGGGGAAGATCGTG Variant GeneID:514789|ISCU:NM_001075683:5_cdna 178^291 3 EMBV3_06131 GeneID:514789 17 GENE ISCU MGC140639 iron-sulfur cluster scaffold homolog (E. coli) EMBV3_28830 GTGGACGGCATACAGAAAAGCTCATGGCGTTTAAAGCAATATACCCAGACATTGTGCGAC Gene GeneID:535597|RORA:XM_002690848:188_cdna Constitutive 1 NULL GeneID:535597 10 GENE RORA NULL RAR-related orphan receptor A EMBV3_07369 TATTCTGTACCATGCCCTTTGTCAGATGAGTTTTCCTTTGTTATTCCAAAAACTGAGATG Gene BVT0102_257800 + 0 NULL GK000009.2:85972084-86175487 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30744 ATTTCTTCTGGGAGCCTGCAAAGACCACCAGGACTGTTGCCTCATCGGCCTCAGTGAGCT Gene GeneID:614923|SIGLEC14:XM_002695238:32_cdna Constitutive 0 NULL GeneID:614923 18 GENE SIGLEC14 NULL sialic acid binding Ig-like lectin 14 EMBV3_30345 GGCCCTCAAGTTCATCAAGAAAAGGGTGGGGACACATATCCGCGCGAAGAGGAAGAGAAA Gene GeneID:100296205|LOC100296205:XR_083670:128_cdna Constitutive 0 NULL GeneID:100296205 5 PSEUDO LOC100296205 NULL similar to ribosomal protein L36 EMBV3_24550 CTGACCGCGATCTAGGTGATTCTATGAGTGAAGAAGACATGCTTCAGGCAGCTGTGACCA Gene BVT0102_058955 + 0 NULL GK000021.2:57342028-57361246 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121707 TCONS_00121708 TCONS_00121709 1 XLOC_073454 Coding TCONS_00121709 XLOC_073454 Coding Coding ATXN3 21:57343724-57381214 j TSS90590 5283 1 TCONS_00121709_2 352 11 0.859372082477527 0.0018368780485989 0.00340829672322297 0.00305508346396294 0.00270003055699814 0.000953851834064081 0.00101109743240276 0.000963334155762379 0.00225490695537691 0.00318112682809406 0.000121190928610398 5.91217237576931e-05 3.41022223879192e-05 9.58419514782107e-05 2.52794330917731e-08 0.000288084846043415 0.00434911043585368 6.51203625469826e-06 0.000158846190909704 0.00279373028192029 0.0018856886594915 0.00103341002361812 0.000831406004261566 0.00117197403905235 0.00130462143655483 0.00361505194009377 0.00277503634717503 0.00128740393942552 0.000262946337302891 8.80467631993207e-06 2.57555972170094e-06 NM_001099216.2 ATXN3 Bos taurus ataxin 3 (ATXN3), mRNA. 0.0 1597 100.00 0.167329169032747 NM_004993.5 ATXN3 Homo sapiens ataxin 3 (ATXN3), transcript variant reference, mRNA. 0.0 3050 81.76 0.590384251372326 TCONS_00121709_2 sp|Q9CVD2|ATX3_MOUSE ATX3_MOUSE Ataxin-3; 0.0 587 83.66 0.997159090909091 2 coding 0 0 0 0 -2.10775924837374 0.0225933302151821 0.0469712610132416 0.323133415539939 GGGCGGGGGCGGAGGGGTGGGGCCGGGGGCGGAGCTGGAGGGGGGTGGTTCAGCGCGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAAAAACAAGAAGGCTCACTTTGTGCTCAACATTGCTTGAATAACCTACTGCAAGGAGAATACTTCAGCCCTGTGGAATTATCTTCAATTGCACATCAGCTAGATGAGGAAGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGACTATCGCACATTTTTGCAGCAGCCTTCTGGAAATATGGATGACAGTGGCTTTTTCTCTATTCAAGTTATAAGCAATGCCTTGAAAGTTTGGGGTTTAGAACTAATCCTGTTTAACAGTCCAGAGTACCAGAGGCTCAGGATTGATCCCATAAATGAAAGATCATTTATATGCAACTATAAAGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTCAACTTGAATTCTCTTTTGACGGGTCCAGAATTAATATCAGACACATACCTTGCACTTTTCTTGGCTCAGTTACAACAGGAAGGTTACTCTATATTTGTTGTTAAGGGTGATCTGCCAGATTGTGAGGCTGACCAACTTCTACAGATGATCAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAATTAGCACAACTTAAAGAACAGAGAGTCCAGAAAACAGATCTAGAACACGTCTTAGAAGTAAATGATGGGACAGGAATGTTAGATGAGGATGAGGAGGAATTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAAGAAGCTGATCTCCGCAGGGCCATTCAGCTCAGTATGCAAGGTACTTCCAGAAATAGATGTCAAGATATCCCACAGACATCGGGTTCACATCCTACTTCAGAAGAGCTACGGAAGAGAAGAGAAGCCTACTTTGAAAAGCAGCAGCAGCAGCAGCAACAACCAGCTCCGCCAGGACAGCTTACACATCTGTGTGAAAAGTCCAGCACAAGCTGCGAAGCACCTGACCGCGATCTAGGTGATTCTATGAGTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTTAGAAGTAAAACAGAAGGAAAAAAGTAATACCTTTCACAAATCATTTAGATACTCAATCTTTCCAATATTGTCCTGTGTGATTACAGCATAGGGTCCATTTTGGTAATGTGTCAAAGAGAACAGTTTTCAACAGAGGAAAAAAGACTTAGGTGGTTTGCAAACAAAACAATGAGAGGGTGGAGAAATACATCAGTTGTAGGACTAAAAAATGATCCTCCAAACACTAGCCAAAGAGGCATTCAGCAATTAAAGAAATTTAAAATAGTTTTCTAAATGTTCTTTTTTCTTTTTTGAGTGTGCAATATCATATCTAAAATTAGGGCATTTTTCTTGGATCTTTTTGCAGACCAACTAATAACTAGCTCTGGCCACAGAACTTTCCCCACACACCTGGTCTTTTCCTCCTTTCTGCATAGGAAATCGGGCTCACTTTTATCATCTTAATAGTTGCTCTTATTTCTCTTTAACCAAATTAACCTTGTAGGACAGTGTCTTCTCTGTTTTGATAATAGCAGCGGTTCCAGGATAAGCTGTTTTCCTTCTGACTGTATCGTGCACTTGGGTTGTTTCTCCTCTTTATTTTCTCTGATCACAGTTTCTCTGTTATCTGGTTTTCATTATTTTCTACTACTCTGTTGAAAGACGGTAATGTTTCTTGAGGTTTTTAAGCCCTCGGAGAAGGGATCATTATTTTATGACTCCAGTGCATTCCTGTACTCTAAAATCAGCTCTACACAAGTATTTGAGAGTAAAAGAGAATTCTGTCATTGTGAGCACATCCGTTGTCAGATGCATTGTGGCTCCCTCCTCAGTTAGGTCAGAACTTTAAGGCGTGTTGTAACCCTCCTTCCTGCACCCTGTTATTTCCTTTTCTTTTGAAATTGAGAAAAATAGGAGGAGCATAGTGTGCAAGCTTCCTTCTGTTACATACAGTGTGTGTAAAACAACACACAGGGCCCACTGTGAACGACAGATGAAATGTGGCCTTCGATTTTAGTAGCAGTTTAATTTTATTTTTGCTCTTGTGACTGGAGCTGTTTACAGTTGAGTTATGAAGTGTGGATGTCTGCTTCTGCTGTACGTCTTTTAGTAGGTAGATCTTGCCAGAGATAACCATTTAGAACATGAAAATAATTTACCAACAAAACTGCATTGAAATTTGTACTGTGACTTGACACTTGGCATCATGTTTAAATAGCTTTGAATTACAGAAGGCACAGTACTTAATGGATTTGTAAATAAGAAAGTCTTTAGTTTTGATAAACATTCTTTAATTGGGATGCAGAGTTTCCTGCTGGGTCATTGCAGTGGGATGATTTTCATGAAAGTTAACCATGTCTCTCTGAAATGGGCCTTTTAGACTCTCCCCTTCCCTCATTCTCCATCCCCCTTTGAAGCCCTTTTGAATGTTGAATTGTTCATTAGCTAAAATTTAAGAAGATTCAGCTGACAACTTAGAAAATTAAAGTATGATATATTGCCGTACCCTGGTGTATGGCTACACACATTTTATCAGGGAATTTTTTGATGTAGGATTTATTGCTAACTGAAAAGAGATGAGAAAGTACCTTTTATTTATGATTATGAAATAGCTTTTACTTGGATAGAGACAGGCTTTTTTTAAGTCATTATTTTGTGCCAAGTTAAGTTTTATGAAGTTCCCCTTACATAAAATTAAACAGTTTATTTTAAAATCTAAAGGTTTCTTTTGAGAATTGAAAATGGTTCAGAAGAATTATAAACTTTTAGAAGTGCAAGGGATGTTGGAGTTTGGTACTACTCCCTGAGATTTACAAATCAAAATATTTTAAGACTGGACATTTCTGTAGTTAACCCAAGTATGCTAGTCATATTTTCCATGGATATTTGACCTGTATCTTTTCTCATTGAAAAAAAATACATTCTTACATTTGAATTGATGAACTACCTGATACAAAAGTGAAAAAGCGAATATACATTAAAAAGTTTTAACCTTGAAAATTTATAAAGTTCTTATATTACACACCCTTGCTAAAGCACTTATAGGAATATAGGACGTTGACCTTCTTTTGTTAGGGTATTTTTTTAAAGCAGGGCTGAGCACACACTGGATATATTTGAATGTGTTTATTTAGTTTGTTGTGAAATTGTTACATTTGGCAGGCAGACTCAGAATCACTAGTAAACTGCCATCTGGTGTGGATTGGCATAAATATTATTGAACATTTATATTCCATTTCTTAATTGATGGGCCAGTATGTAAAGATGCCAATGCTCATAACCACAGTAAGAAAATTATTAAGTTACGCAAAGTTATAGTTTACACAGGTCATACGGTTTACTTTAAACCACCTGCAAGTCAGAAACAATGAAATTCACCATAACTGTCCTGCTAAGAACTTTTATTTATAGAAAGATTTCCATTCTGTTTTACCAATTGGGAACACCTTAATGTTTAATATTTAAACTATTGGTATCATTTTTCTAATGTATAATTTGTATTACTGGGATAAAATAAGTACCATGGCAATGCTAGTGTTATAAGTGAAGTTTAAACAAGCTTTGGAAATAACACTTTCACACTGATAGATGTCATGGGTTTAATAAGTAGTTATTTATGTTTCAAAAATTCAGAGTAGTTAACATCTAACCTAAACCATCATTAAACATTTTTACCATAATTAACATACAAATACTTCAGTAATGCAAGTAGTTTGAAAAGGCTTCTGCAGGTAAACTGTATTTCACCTCTAAGATCTTGGCCAAATAATTTACGATTCACAGAATATTTAAGGTGCTTTCTTTCTTTAAAACTTAATTTTTCTTAATTGAGGCTTTATTCATGCCATAGTTAATGAAGAAAAACTCCAAACTAGTTGAGGAGCAAAACTACCCATACTCTACATTGTTTCATTTGATGTTAAGTCAAGTAAAGTAAGTTTTATGCCAGTAAGAGCCTAAGACATTTTCAATGTCTGCATGTTTGATACTGTTTTCAAATAGTATCACACTAGTGCCAAGATTTACTAAATGTCTTAAAATTGGCCCATTTGGAGGTGTACAAATGCAAAAAAGATGATTCTCAGTGCACAAGCAAAAATGTAATGATGATAATTGAAATTGCCTAGATTGAAAAATAAATCTTAAATGTTTTAAATTCTTAAGAGGATTCAATCTTTAACATTGATGACTTCCTATTAGAAACTTTATCTGCAATTGGAGCAACCTATGGCCACTACTTTCAAAGTTAATTGTTGCAGCTGGGCCCTGACAAGTATGGAGATATTACAGATGTGATCTTAATTAAGAAAAATCAGGTTGGATTAATTATTTCAGCAGTATAAGTAAGTTTTCATATTTTCAAAATAAAAACTTTGCTTCATTTCTGGTCCCTTTGTAACCAGCATCGTTTGTTAAAGAAATGAATGAACTTGTATTGTTTTTTAAATACACAACATATTTTTGTTTCATTTTGCTTTCATGAATGAAAATATTGACATGGTTGTTTAATTCTTGAATTTTGATTTTTTTTTTTTGGTTCAAGAAAATGTCTGCTATTTTAATTTTTTTTGCAAAATGGTCTAGCATTTTAAAAAATTAATGCTACTAACCACATCGAAATTATTGCAATTGGCATGTTTAATTATCATAGTATGTCAATAAATGTTTTAAGACTATGGATTCATAAGACAGGGAGTAGAAAGCATTTGTGAAACATATTTGGAAATTCCTGATTTGTTTAGGAAGCACTTCACTTGTCTCTTGCATAGTTCAAAAGTGAATATTTTCAGGAATTTTTTAGAGAGGAAAACATACATTTGAATGTGATTATCTAATTTCTACAACACTGGACTAGTAGGAATGCATTTTTAAAAATTACTGTTCTGTATAAGTAACCTTTGAAATTCAAGTAAAGAATTAAAAGCATCCTTTTGGCCACGACACAGGTGCACTGTGGCAGTGCCATTTGCTCAGGACCCAGCTCTGCAGCCCTTGTGTGTGCGCTCTTCTCTCTGAGCTGTCTTGCCGTTAATACACACACAGGCCTTCCTGTCTGGTCCTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACTGAGGATACTGTTGTTAATGTGGATGGTCGATGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTTTTTACT EMBV3_05930 GTGCTGTCTTAAACATTGGGGTACATGCATTTTGCTGGTTAGCTCTTCAGCATTGTCCAG Gene BVT0102_096387 + 1 EMBV3_25742 GK000030.2:135503511-135804045 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15699 GAGTCTTTTAATTTCATGGCTGCAATTACCATCTGCAGTGATTTTGGAGCCCCCCCCCCC Gene GeneID:540539|HRASLS:NM_001076225:114_cdna Constitutive 2 NULL GeneID:540539 1 GENE HRASLS NULL HRAS-like suppressor EMBV3_22235 CCCCATAATGCACCTCTCCAACTCTCACCATTTGGCACTGGAACTCCTGAAACACCACTT Gene BVT0102_039731 + 0 NULL GK000013.2:62220648-62226993 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045875 TCONS_00045876 TCONS_00045873 TCONS_00045877 TCONS_00045874 1 XLOC_026558 Coding TCONS_00045876 XLOC_026558 Coding Coding PLAGL2 13:62223053-62236920 j TSS33392 3680 1 TCONS_00045876_2 158 4 0.73489110053368 0.0013819355466865 0.000154973175996734 0.000197628798512764 0.000239514607892843 1.36575130098976e-08 9.07681476627863e-05 0.000190373221557632 2.65202100344635e-17 8.24987715835799e-16 8.72489301297296e-05 6.21529121126651e-05 3.30361726660446e-05 1.8526090271566e-05 7.05346447912893e-06 3.72920669232565e-06 2.90168870656953e-29 8.48762638350602e-05 0.00186043953248236 3.94651816616446e-10 0.000176190532420588 3.56508426600704e-05 0.00182688153991709 0.000493195304006701 1.97209832566195e-07 0.00032918993937247 1.1790045158651e-06 3.71135226817017e-09 3.13230579043311e-05 0.000143347916859844 1.34477175850829e-10 XM_002692287.3 PLAGL2 PREDICTED: Bos taurus pleiomorphic adenoma gene-like 2 (PLAGL2), 0.0 5541 100.00 0.834510869565217 NM_002657.3 PLAGL2 Homo sapiens pleiomorphic adenoma gene-like 2 (PLAGL2), mRNA. 0.0 2560 78.20 0.833695652173913 TCONS_00045876_2 sp|Q9UPG8|PLAL2_HUMAN PLAL2_HUMAN Zinc finger protein PLAGL2; 3e-93 283 98.48 0.829113924050633 3 noncoding 0 0 0 0 -1.26537205636506 0.05241976758345 NA NA TGCACCGCACAATGGCCCGACCGCCGCCACTACCGGGGCCTGAGCGGGCCTGGCGGAGCCCGAGCGCGGCCCGGCCCGCAGCGCGGGGCTCGGAGCGCGGTGAAGAGATTGTTTTCTGAAGGCTGCGTTGGAGGCTGTGACAGAGCACAGAGCCCTGTGGAGCTGATGGGGAGGCTTTCTCAATAACATGGCCCTTCGCCATTAGCCTTGCCATGACCACATTTTTCACCAGCGTCCCCCCCTGGATTCAAGATGCAAAGCAGGAGGAGGAAGTGGGCTGGAAACTAGTGCCCAGGCCTCGGGGCCGGGAGGCGGAGAATCAAGTGAAGTGCCAATGTGAAATCTCGGGGACACCCTTCTCAAATGGGGAGAAGCTGAGGCCTCACAGCCTCCCCCATCCAGAGCAGAGACCGTATAGCTGCCCTCAGCTGCACTGTGGCAAGGCTTTTGCCTCCAAGTACAAGCTGTATAGGCACATGGCCACCCACTCAGCCCAGAAACCCCACCAGTGCATGTACTGCGATAAGATGTTTCACCGCAAGGATCATCTGCGGAACCACCTGCAGACCCATGACCCCAACAAGGAGGCCCTCCACTGTTCTGAGTGCGAGTCCACAGGAGACAGGCAAGAAGATTGGAGCAGTTTTCTCACAGGTCTGCAATTCTGTTTTTCTTCAAGTACATCATGACCCCCTCATCCTCCTTTTGAACTGGAGAGAGGGGAAGAAATGAAAGGCATGCCCACTTCCACTCCCCACCCCCCCCATTCCTTAATCCCTACCCTAAATATCATGAGTTGTTATTGGTCTTGGAAGGAGGGATTTGGGTTCTAGGCTGGTGTGGATAGCAAAGGAGAGGGTGTGAGCCCCTCATATGTCTCTCCTACCTGTCCCGTTTTCAGGAAGTTGTAGAATTGTTGGAAGAAGAGTTTTCAGAAAGTTAGGACTGGGCAGATAATTAAGTGCTAATCATCATCGTATCATGTATGGGGGTATACGTCATGTATGGGATGTATCATGCGAGGTATACATCATTGCCTCCCATACCAGACTTTTTTCTTCTCCAGTGTTCCTCCTCTCTCTTCCACTTTGCAGTCCCTCGGGACTCCAGGCCACTGTGCATAGGCTTCTCCGCTCTCCATCAAAGAACTTCCACCTTCCTCTTGTGGCCCCTCACTTTTGCCCTCAGTACTCAGCAAGTTTTCTTGCAATAAACGATTAATTCTCTTTTGACTTGTGGGGCTCCCTTGCTGCAGACAGCACAGCTCTTGCCCAACTGAACCTCACCCTGCTTCATCTCAGTTCTGCATGGGCTTCGCTCTTCCCGCTCGTGGAAGGGAGGCCTCTCAGGGACCACCAGTATGGGGCCCTCTTGAGACACTTCCACTCTGATTCAGAAACACACTTCTACCTCTTTACTGTTAACTCCTACAGATGGCAGCCAGCAGTTTCTGGGCACTTCTCTCGGCAGGTGCCTCATACTGGCTTCTGGCTTCTTCACTAGGGTTTCAGGACAGACTACCAAGGAACTGCCTCAGCCTCTTCCCAGTTCTCCCTGTCCCCCTCCTGTCTAGAAATCACTTTGGTTTATGAGCAGGTACAAGACCCACGCTTCTGTTCAGTGAAGGCCAGTACTCTTTCTTTGAGGTGAAAGCCTTAAATGTAGCTTCCTGGCCTTGATTGGAAGCAATGTGTAATGAATAAACATGTTTTCATTTAGGCAGGCTAGCTTGGGATACCTTTTTTTTTAAAAAACAAAACCAGATACAAAGATGTCTGGCGAGATTAGAATCAGACTAGGTGATTTACTTCTAAAAATTAGCTTCAGTGAGTCCCAGGGACTAATTAAGGTTTACTTTTAAAAGCGTCCACCTTGGTACGCAGCCCCCTTCTGCATGCTATGCATGTTATTGGGACTCGTATATAGGAGATGGTAAGTGAGGACCCAGTTGGGACTCAGTGCCGCCATTGTCCTTGTCGTCTCTGACCTTCATCACTAGACCCAGCAACCCTCACCCCTCCTTGCCACCTTTTCTGTACCTTTTGTTTACAGAGGTAAAGGGGCCTCTGGCTATGGAATATGAAGTCTCGGACTGTTAGAGGAGTCCCTTCTCTGCCTTCTCTTTCCTGTCCCTTCCTTGAATTCTCTCCCCCATTAGTGATGCTGGGAAACTCATAGGACAGGCAAAGCAACTTTAAAATCTTGTAACTTGGGGCCTTGGCCCTCCTCCCTCCTCTTCCTTCCAGTCCTGTTCCTCCCATTCTTCCTTCAATGCTCTTCCCACCCACAAAGAATTTTCCTATCACTGTGAACTTTGCTGGTGCAGAGGAACATCTGCCTGCACCTTTTTTTTTTTTGGACTGTAGATAGCCAGCAATTCTTAAACCTCCCTTTCCAAACAAAAAAGAGTCCTTGACCTCTTGTTCAAAGGATAAGAACAGCTTTATCCTACTCAGTACCAAACCCACTTCAGTACCCTTACTGAGGCCATGAGAGCCTAGGGGTTTCTGCCCAGGACAGGAGCCATGGCATGTCGGCAGAGACCAAACAGGGACCAGGAAAGGGGGGGATGTCCCCTTCCCCACCGCCTCCAACCTCTGTCAGCGATGAGCTGCCCTGAACAGTGGCAGGCACCTCCCCCTCTGCACAGAAGCTAGTCAGGGTTGAGTGCGGTCCTGGGGGCCAGGGGGTAGTAGCATGCCAGCTGGGTCAGCTCAGAGGATCTGCACATCTTGGGAGAGGGGAGAGGAACAGTGAGTTTTTTCCCCATTACCTTTTTGGCATTTTGTTTATGAAATCCGGGAAGCAGGTGTGATTCCTTTTTTGCTCGTAGATATTGTCTTAAGTTGAATTTCTACTCCCCTAAACTTTTCCCCTAGTAGCCCTTTAAGTCCCTATGCCGCCTCCTTTTTGGTAGCTGTTTCTCCAGCCCCGCTCCATCTCCCCTCTTATCTAGGAGCTGTTTTTAAGCACGACTTTTTTAACAGTTTATATTGTACAGGATCAATATTTTGCTTTTTAACAAGGATATTTATGTAATAAGAAACTTTTGCCTTAGGCAGGTGTTGGCCAGAAAAGTCCAGATTCCTCTGGGACCCCACCCTGGCCTCTCCTGGAGCTCTGAACCTGCTGTGGAAGGAACTGGCTGTGACCTCACCACTGGAAAGTAGGGTCTGTGGTGAGGTAAAGGGGTGTACTGGTTCTGACAGGAGGAGGATCCACCATGGTAATCAAGTGCCTCTGTGGAGGGGTTGGAAAAGAAATGTTCTAGTTCAGTTTCTTCAGATGTTCGCCTGCTTCCTTAGTGGATTCTCCCCATAATGCACCTCTCCAACTCTCACCATTTGGCACTGGAACTCCTGAAACACCACTTCTCATACACCCCACTCCCTCTCTCCCAGTGGTCAAGGCTTTGGAGCCACTCTTTCGTAATACCAGATTATTTAAAGAGAGAAAAATACAAGACAAAACCTTCTAGCACTTTGTAAACACAGTGAATAACCTCTTGGAATATTTTTGGCTTTATATAAAACAAGGTTTTTAATTGTAAAATATAAGTGCCATTAGAAAATGCACAGGGCCTATCTTTGTTAAAGTAGATTTTTCAATGTTTTACAGAATGACATTTTCAAAAAAAAGTTTTTATAATGAAGTTGTTTATTAAAAACTTCTGAATGATG EMBV3_34162 CACTTGGGAAAGAAGTCAAAGTCATGCAGTGCACATGAAGATCCCATGTATGACATCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18732 TCAAGACTCCTCTGAACTGTTTACCAACCACAAACACCTCATGGTGGAGACTCCTGTACC Gene GeneID:535387|BBS9:XM_002686822:78_cdna Constitutive 0 NULL GeneID:535387 4 GENE BBS9 NULL Bardet-Biedl syndrome 9 EMBV3_30880 TGGTCCACGCTCATAGTTGGAGTGTCTGGAATTCGTGTGTTTAAGTTATCTGACCACCAC Gene GeneID:526652|FLCN:NM_001035363:57_cdna Constitutive 0 NULL GeneID:526652 19 GENE FLCN MGC128946 folliculin EMBV3_01877 GTTTAGCAGACCTTCTCATGGGTCACGGAGGCCTGTCAAGAACAAAGCATTAGCCCAGAA Gene BVV0102_245080 + 0 NULL GK000021.2:33322788-33559733 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123733 1 XLOC_075285 NonCoding TCONS_00123733 XLOC_075285 NonCoding NonCoding - 21:33481622-33481964 - TSS92492 342 1 0 0 0 0.000162350825002843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000630826792941948 0 0 0 0 0 0.00109184120339397 0 0 0 0 0 noncoding 0 0 0 0 GAGGGCCCGGGAAGGAGATCCTGCTGTCTGCTCCCTGCCAAACCCTGCAGCTTCCTGAAGGGGAGGACGGCATCAGCTGAGCCTCAGCCATATCACAACTGTTCACCCAACCCTTCAGGAGAAGGGGCCGCTAGGTCTCTTTCCTCTGAAAAACTGGGTTAACGTTCCAGCCCAACCTACTGCCCCAGCCCTCCCCCAGCACGCCTTCTGTTTAGCAGACCTTCTCATGGGTCACGGAGGCCTGTCAAGAACAAAGCATTAGCCCAGAAAAAGAGTGGAAGTCACTTGTTCAAGGTCACAGGCAAGTCTAGCGAGGCAACAACCCAGGTCCCTCCTCCCCCC TCONS_00121035 . 3' 77770 TCONS_00121035 . 3' 78111 EMBV3_16258 GTGCACCCAACCCTGTCCAACAAAGAGAAGGAGATGACCCCACCCTGAGCGTAAGGTCAG Variant GeneID:532432|REEP2:NM_001046325:16_cdna 410^671 1 EMBV3_08614 GeneID:532432 7 GENE REEP2 MGC137722 receptor accessory protein 2 EMBV3_38071 GCTGGCATTCTGTCACTAGAGAATACACAGCAATATCTGGTATGTTGCAAGCTTTCAAGA Gene BVT0101_022536 + 0 NULL GK000003.2:78258247-78269731 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170352 TCONS_00170355 TCONS_00170357 TCONS_00170353 TCONS_00170354 TCONS_00170351 TCONS_00170356 1 XLOC_103563 Coding TCONS_00170354 XLOC_103563 Coding Coding SERBP1 3:78242924-78261242 j TSS127304 5544 1 TCONS_00170354_4 407 8 0.697767101599607 0.00143502660270282 0.000629867065092277 0.00109803397421224 0.000319375272425929 0.000295266869574632 0.000245745917995581 0.000252065949852814 0.00070776552508595 0.000454630262011352 7.24319180053134e-05 0.000256149348544557 0.00020803662126657 1.44442908332739e-05 9.06474660610509e-06 2.31628806282478e-05 0.00817997724713852 0.0044433434943376 0.00651734907663833 0.000462172471962147 0.000140888132783088 1.46131978119824e-05 0.00377647594858121 0.00165135181522597 0.00188158539138628 0.00107574638870702 0.000189051053791083 0.000199731720300694 0.000324269911655445 0.000167194893379784 0.000623451699554245 NM_001046449.1 SERBP1 Bos taurus SERPINE1 mRNA binding protein 1 (SERBP1), mRNA. 0.0 2048 94.96 0.229076479076479 NM_001018067.1 SERBP1 Homo sapiens SERPINE1 mRNA binding protein 1 (SERBP1), transcript 0.0 4421 87.50 0.644480519480519 TCONS_00170354_4 sp|Q9CY58|PAIRB_MOUSE PAIRB_MOUSE Plasminogen activator inhibitor 1 RNA-binding protein; 0.0 805 98.28 0.997542997542998 1 coding 0 0 0 0 -0.101748297280021 0.758947947734453 0.0323361905720061 0.542685539839085 TTCAGATAACATTTTAATGTTATTTGTTGAGTACCCTTTACTAACACCCAATCCTTGACTTGCCGGGCACTAATGTCAGTCTAGACTCTAGAAAGTGTTTCTACAAACAATGCCTTTTGGAGGCTTTCCCAGTGTCTGGCTAGTGCTACACTGCCAGGAGTTAACAATTAAAGCACCGGTCGCAAAACGGCACTTCTCATCCAAGAAAAGCGCGCAACACTCACTCTGCTAGTTCAACCTGTCTTTTGGATCAATTCTGCTGCTCGAGTTCAAGTCCCCGCGAGAGGAAGCGTATTCCGCCTCACATTAAACAGAAACACTTCGATTCATTATTAGGGCTGCAGGAGGGCAACTCCAGCAACTAGGGATTTGGAAGAAAGCGGGTTCCGCTTTCGCGAGGCCAGTGCGGCACCTCAGCAATCTGCCAGCCCTGGAAGTTTGTGAGTCTCCACTTGTAAGACTGATAGTCACCTTGACCCTCCCGGAGAGGTGGGGAAAGTTAGTCCTGGACCGGAGGCGGGGAGTAAAACCGAAGACTGAGAACTTTCGCAAGCAAAACACGCCGTCACGTTTTCCTGTTTTCAGCGCAGCAGGAGATGCCAAGAGTTTAAGGGTGGCGATAGCAGGTGGCAGGACTCCGCCCACCACCGCGCTTCTCCCTCAGCTTGCACGCCCCTCTCCCTCGGTGAGGTCCCGCCTCTGAGGCGCGCGCGAAGAGTTGTTAAGCCTTGTATTCTGGGAGTTGTAGTCCTGGTGCCGGGAGTCACCCCAGGAAAAGCAACTCTGGCCTACAGACCCCGTGGTACCGTGCGGCGCTGGCCGCTCCCGGATGTGTGCCTAGCGCCGGAAGAGAAGACAGCCCCCCTCTCTCAGCCCGGCCATCTTGTGGGAAGAGCTGAAGCAGGCGCTCTTGGCTCGGCGCGGCCCGCTGCAATCCGTGGAGGAACGCGCCGCCGAGCCACCATCATGCCTGGGCACTTACAGGAAGGCTTCGGCTGCGTGGTCACCAACCGATTCGACCAGTTATTTGACGACGAATCGGACCCCTTCGAGGTGTTGAAGGCAGCAGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGGGGGCCCTGGGGCTAAGAGCGCAGCTCAGGCCGCAGCTCAGACCAACTCCAATGCGGCGGGCAAACAGCTGCGTAAAGAGTCCCAGAAAGACCGCAAGAATCCGCTGCCCCCCAGCGTCGGCGTGGTTGACAAGAAGGAGGAGACGCAGCCGCCTGTGGCGCTGAAGAAAGAAGGAATAAGACGTGTTGGAAGAAGACCTGATCAACAACTTCAGGGTGAAGGGAAGATAATTGATAGGAGACCAGAAAGGCGACCACCTCGTGAAAGAAGATTCGAAAAGCCACTTGAAGAAAAGGGTGAAGGAGGAGAATTTTCCGTTGATAGACCGATTATTGACCGGCCTATCCGAGGCCGTGGTGGTCTTGGAAGAGGTCGAGGAGGTCGTGGACGTGGAATGGGCCGGGGAGATGGCTTTGATTCTCGTGGCAAACGTGAATTTGATAGGCATAGTGGAAGTGATAGATCTTCTTTTTCACATTACAGTGGCCTGAAGCATGAGGACAAACGTGGAGGGAGTGGATCTCACAACTGGGGAACTGTCAAAGATGAATTAACAGAGTCCCCCAAATACATTCAGAAACAAATATCTTATAATTGCAGTGACTTGGAACAATCAAATGTGACTGAGGAAACACCTGAAGGTGAAGAACATCCAGTTGCGGACACTGAAAATAAGGAGAATGAAGTTGAAGAAGTAAAGGAAGAGGGTCCAAAAGAAATGACTTTGGATGAGTGGAAGGCTATTCAAAATAAGGACCGGGCAAAAGTAGAATTTAATATCCGAAAACCAAATGAAGGTGCTGATGGGCAGTGGAAGAAGGGATTTGTTCTTCATAAGTCAAAAAGTGAAGAGGCTCATGCTGAAGACTCAGTTATGGATCATCATTTCCGGAAGCCAGCAAATGATATAACATCTCAGCTGGAGATCAATTTTGGAGACCTTGGCCGCCCAGGACGTGGTGGCAGGGGAGGACGAGGTGGCCGTGGGCGTGGTGGACGTCCAAACCGTGGCATCAGGACTGACAAGTCAAGTGCTTCTGCTCCTGATGTGGATGACCCAGAGGCATTCCCAGCTCTGGCTTAACTGGATGCCATAAGACCGCCCTGGTTCCTTTGTGGACCCTCCTCTTTGAGGCTTGCATGCTTAAGGATCCCAAACGACTAAGAAATTTAAAAAAACAAAAAAAAACAAAAAAAAAGACTGTCATTCATACCATTCACACCTAAAGACTGAATTTTATCTGTTTTGAAAATGAACTACTCCTGCTACACAGAAGTAACAATATGGTAGTCAGTTTTGTATTTAGAAATGTATTGGTAGCAGGGATGTTTTCATAATTTTCAGAGATTATGCATTCTTCATGAATACTTTTGTATTGCTGCTTGCAAATATGCATTTCCAAACTTGAAATATAGGTGTGAACAGTGTGTACCAGTTTAAAGCTTTCCCTTCATTTGTGTTTTTTAATTAAGGATTTAGATGTTCCCCCTATTACAAACTGGTTTTAAATATTGGACATAATATCAGTTTTAATACCTGCTTTGCATTTTCACACATGGTCAACTGGGACATGTAAACTTTGTCAAATTTTATGCTGTGTGGAATACTAACTACTTTATGTATTTTAACTTAGTTTTAATATTTTCATTTCTGGGGATAAGGTCTTTCTCACTTCTCATGATAGCTGTTATATATGCTAAATCTTTATATACAGAAATACCAGTACTTGAACAAATTCAAAGCACATTGGTTTATTAACCCTTGCTCCTGCATGGTTCATTAGGTTCAAATTATAATTGATTCAATTTCAATTATATTTACTTTTAAAATGTCACTTGGCCATTTTAAAAATCAGTCTAGACACCTTACTGGTAAAAGTTGTTGAAGCTACTTATTGTTGATAGACACATATTGTCAAGTGAAGTAGTTTTATGGGTGTTGGATTTTTCCTCCTCCAATAGGGTGGATGGAACAAGTTAATTTGGCTAATGTGTTAACATTTAAACTGCTCTGTAAAGTAAGTGGCCGCTCAGTATGATATGTATGTGTGAAAGGTCCCAAAATCAAAATTGTACATCCATAATCAACCCTTTAACTCTCCCTTGTTCTAAAGAAACCAAAGGGCACTGGTTAGTATGGTAAGGTTGGAGGTTGTTAATTTCTGGGATTTGGAAAGTGGACAGCTTTACTTTATAAGGTTGGAACAGCAGCACCATCCATGAAATGAAAACCAAAAATTTTACTGTTTGCAAATTTCCTATATTGCTATTAATTTTTGTCTTAAGTTGATAGATTCTGTAGAAGGTAACAACTATCTTTTTACCTCTTCCTCTGTTACAAAATTAGGTTAACAATGGATTCTTTAATCAAGAGCATCACCACTTACTAAAACATACATGGAGAGAATAATAAACAGCCTTTCTAGGATTTTTTTTTTAAGTCTTCTGCAACATTGATTAACAGGAAAGGGGCTTTATTTACAGATTTAAAGATCTTTTTGTCACTATTAGTAATTTTCTATGTGGTAATGTCCAATTTTAAAAATACTTTATATAAGACATTAAGTCATAAAATGTCTGTTTATCTCATTAGTTTTCCCCTGTACTTCTAAAGGAGAAACCATACAGTACAAGAGTTACGCATTGGGATTGGATTAATTGATACAGTGACCTACTAGTTTGACATTTTAGGAAGGAGGTAATTGGTTTTTTTAAATGGTGGATAAGCTTGTGCTGGTGTTTTGGATCTTATGATGCTGAGCATGTTCTGCACTGGTGCTAATGTTAAACATAATTTTATATTTACAAACATATCTGCTACCCAGAGGCAAGTATTAATTTAGTCCATATGGACTATTGACCCCTCTTGAGATTGCAACATACACATTCCTAAACATACCCATAAGTAGTGTGTTTAAAGTATCTTAACTCATTTTTGGATACGAACATGTAATAAACCTGATTTCTAGCAACATATAGAAAACACCTATTAAAAAAATAAGTTCTACTCATTGTCAGCCATTGCTGGCATTCTGTCACTAGAGAATACACAGCAATATCTGGTATGTTGCAAGCTTTCAAGATAGCCTGGATTTTAAAAGTCAGTCCATTAGTTGTATCTGATGGATGTAAATTTGCCTCCTAGTTCACTTTGTGTCACGAGCTAAAACTGTGAACCTAACTTTCTCTTATTGGTGGGTAATAACTGAAAATAAAGATTTTATTTTCATGCTCACTTCTTAAAAGTCATAAAAGCAATCAAATAGGAGCCCATTTATCGTCACGTGTCTTCTGACCTATGTGTGTATTCCCAAAGGTAATGTTCATATTTCATTTTTTCCACAAACAGACTTGTTTATATGGAGTGTTTGTTAACCTAGTCTGTCAAATAGCAATTGGGAGAGTACCTATTTTAATTACAAAGTTTAATTCTTGCAAAATGAATTTCAAGGACCGACATGACAATTGACTTGTAGGAAAATTGACAATTTTCTTGTAGGAAACTCCATGTTTGAGTGAATGTCAGGGATTTGTCTTTTATGTTGAGGGTTTGTCTTTTCACAAATAAGGTAATAATGGCTGATAGAATGTTCTAATGCACTTGTGTCTTGATGCTTTTAAAGTGAAATAGTGGTACAGTTTGTATTTTTTATTAAGATTTTCAGTTTACATTGAGATGATGGAGATAAGGTCTCATAGTTAAATATTTTGAGGCCTTTGTGCAGTTATGAAAGATTTTTAAATGTGTCACCAGGCACATTATACATCTAAGTTACTTTACTCAGTTTCATTTAAAAAGGAGGCAGAATATATCTCGAGTTGTAAATAAGTAATGTGTTTGGGGATTGTTTCTGGTGTTTTATGGAGGGAGAATGTTAGGTATTCATTTTTATTGTATTATTTTTCTAATTGCTGTAGGTGGTTGGAAATAGAAAATTTTTGTTATACGCTGTTAGGGAGTTGCATAGAAAGTCTGAATATTGTATATTAGGTCTTTTAAACATATCTTTAAGAGACTAACATATGGAAAGAACCAACAAATATCAAAGGGTTAAAAAAACTCAGAAATGTGGAGCTGCTAGAACCTGAATGATTTTGACTTTAAAATCATTATCATGTATACTAGTGGACATCTAGAAGACATCTATCCTAATAGCAATTCTAGGCTCTTGGGTGCCTGCAACTCTGCTTTATAAAGAAAGCAATTAAATGCTTAGAAAATAGATTCTAACCCAGACATTGTATTTCTACTGAAATAAATAGGCAGAACACTTAAAATCTAGTAACAAAGCAGTAAAATCCCTCATCAGATTTTCAGACCTGATTAGATAAACATTGTAAAATTGTCAGATTTGATCATTAATCTGTATATTAAGTGTCAACTTTCAGAAATTTGGGCTCCTGATTTTTTGCACAGTCTAGGTTTACCTCTGACATG EMBV3_28814 TTGTAGACGTGGCTCCAGAGCTCCTTCGTATTTACAGCCTCATCCAGGCCGAGAACAAGA Gene GeneID:510372|IPO4:NM_001083661:128_cdna Constitutive 0 NULL GeneID:510372 10 GENE IPO4 MGC139090 importin 4 EMBV3_01774 GGACTCCTCACTGCAGACATGCTGAAACAGCTGGAAAGAGAGTGGATGACACAAAAAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04783 ACAAGGCCCACATGGTGACCCTGGATTACACGCTGCCAGGCTCCGTCTGGGGAGGAGGGG Variant GeneID:538212|GNMT:XM_002697244:436_cdna 683^931 1 EMBV3_26251 GeneID:538212 23 GENE GNMT NULL glycine N-methyltransferase EMBV3_20768 GGGGCATCCTACAAATATTTGAGCAGTAGTCCGCACTGTCATGGTCATCAAAATCAAGGG Gene BVV0102_108450 + 0 NULL GK000012.2:19434018-19493433 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16893 AGCAGCCCAGTGGGAAAGAGGAACACGAAACGATGATGGGTTAGAAGGGCCATGAGGTCA Gene BVT0102_234902 + 0 NULL GK000011.2:101200649-101246785 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42789 TACTGGTACATGTTCTGGCCCTACTCTGGGCAACATGGGCCTAGCAGGACATCTCTTCAA Gene GeneID:514609|SLAMF8:XM_002685873:24_cdna Constitutive 0 NULL GeneID:514609 3 GENE SLAMF8 NULL SLAM family member 8 EMBV3_41930 AACACTGAGAGCAAGGCAGCAGGGATCTTAGCTTGGCACCTACCACTGCCTCCAACAAAT Gene BVV0102_275850 - 1 EMBV3_39599 GK000018.2:61592569-61608933 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091649 1 XLOC_056422 NonCoding TCONS_00091649 XLOC_056422 NonCoding NonCoding - 18:61595059-61595251 - TSS68995 192 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00185516820641678 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0456603323372423 0.6824951197732 -0.0393997274013341 0.501200275059283 CAGGGAGCGATTTGTTGGAGGCAGTGGTAGGTGCCAAGCTAAGATCCCTGCTGCCTTGCTCTCAGTGTTGAAGAGGATGGGCACAGGGCATGCTGGGAGTTGTAGTTCCTGCAGAGCCAGCAAAAGACAGAGAAAGGAGTGAGAAGAACATGACTTGGGCTCCTTCACTGAGCTGACCTGTAGCCCTGCGGA TCONS_00087470 TCONS_00087471 . 5' 2492 TCONS_00087470 TCONS_00087471 . 5' 2492 EMBV3_29743 CGGCCTGCTTGGTTCCGGCCTTTTCGTCTTCTCTCTCACTGCCTTCAATAATCTGGAGAA Gene GeneID:540389|KRTCAP2:NM_001101209:198_cdna Constitutive 0 NULL GeneID:540389 3 GENE KRTCAP2 KCP-2 keratinocyte associated protein 2 EMBV3_03297 GAAACGCTTCCCTCCCTGTATTTGTTTAGGTACCAGCACCCAGCCATTCTCTCTCAGCGA Gene BVT0102_012749 + 0 NULL GK000024.2:50154544-50275371 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06045 AGTGCCTGGCCCTGGGCATGTCCCGAGATGAGCACCTGGTGCAGAACGTTTGCAAGTCCT Variant GeneID:527470|RORC:NM_001083451:115_cdna 309^821 1 EMBV3_34261 GeneID:527470 3 GENE RORC NULL RAR-related orphan receptor C EMBV3_40334 TAGTTTGTGAGATTGTCTCATTATCTTTAGAGATTGCTGGACTCTTCCATTCACTCCACC Gene BVV0102_093136 + 0 NULL GK000001.2:102434105-103001090 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15718 GCTGTTCATTCAAGGTCTCTATGACAAGGGCCCGGACCGCTCGGTAGTTGGCGTAGATGT Gene BVV0102_284910 + 1 EMBV3_18219 GK000025.2:27781372-27788270 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146753 1 XLOC_089202 Coding TCONS_00146753 XLOC_089202 Coding Coding C25H16orf58 25:27781383-27795501 j TSS109651 1477 1 TCONS_00146753_2 462 13 0.896295246865481 2.76351367954118e-05 6.80327923576411e-06 0 9.55770185030111e-05 0 0 5.91493207572074e-05 0 0 8.35710633419707e-06 0 0 9.71322897636239e-06 0 3.43394022246397e-06 0 0.000989166805806062 1.69877481184285e-05 0 0 5.75105641971812e-05 0.000438081737435574 6.83239989911862e-05 9.66629909400439e-12 2.81444013484917e-05 0 0.000174544120275329 2.17798897989587e-05 1.09411253705145e-05 0 NM_001076973.1 C25H16orf58 Bos taurus chromosome 25 open reading frame, human C16orf58 (C25H16orf58), mRNA. 0.0 1103 99.68 0.416384563303995 NM_022744.3 C16orf58 Homo sapiens chromosome 16 open reading frame 58 (C16orf58), mRNA. 0.0 1709 86.56 0.966824644549763 TCONS_00146753_2 sp|Q96GQ5|CP058_HUMAN CP058_HUMAN UPF0420 protein C16orf58; 0.0 752 83.84 0.989177489177489 1 coding 0 0 0 0 -0.0681687265519049 0.69143418956227 0.0410895124571217 0.395821505540574 TTCCCATCGTGCAGGGCTGAGGGAGGGTCTCGGGATGGCTGATGTGTTGTGCTCCGAGCAGTTCGGCTCCGGGGCGGCCCGGGGGTGCCGTGCCGCCCCCGACGGGAGCCTGCAGAGGGAGGCCTGGGGGCGCCGCTGGTGGGGGTTCTCCGGAGCCTTCACAGCGAAACCCGGAGGACGAGATGGGGGCGGAGGGGTGGCTCCCGGGACTGCCTCCCCACCTTTCTCCCGGCTGTTGGCCGTGTTCCTGCCTCAGGGCTTCCCCGATAGCGTCAGCCCGGACTACCTGCCCTACCAGCTGTGGGATTCCGTGCAGGCCTTTGCTTCCAGCCTCTCGGGCTCCCTGGCCACCCACGCAGTCTTGCTGGGCATAGGGGTAGGGGACGCAAAAGCCTCTGTTTCAGCTGCCACAGCCACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGATGGGGAGCAAAATGGACTGTAATGCCAAGCAGTGGAGGCTTTTTGCTGACATCCTCAACGACATCGCCATGTTCCTCGAGATAATGGCTCCCATCTTGCCCTTCTGTTTCACCATAACTGTCTGCATCAGCAACCTGGCCAAGTGCCTCGTGGGTGTGGCTGGTGGGGCCACTCGGGCCGCATTGACCATGCATCAGGCCCGGAGAAACAACATGGCCGACGTGTCAGCCAAGGATGGCAGCCAGGAGACGCTGGTAAACCTGGCGGGGCTCCTGGTTAGCCTTTTGATGCTGCCCCTGGTGTCCGATAGCCCCAGCTTAAGCCTCGGCTGTTTCTTCTTCCTCACTGCCCTGCACATCTACGCCAACTACCGAGCGGTCCGGGCCCTTGTCATAGAGACCTTGAATGAACAGCGGCTCTGGCTGGTCCTGAGGCACTTCCTTCAGCGGGGAGAGGTACTTGGCCCCACATCAGCCAATCAGATGGAGCCACTGTGGACAGGTTTCTGGTCATCTGTGTCTCTATCCTTGGGGGCCCCCCTACACCACGTGACGTCCAGTGTCTCTGAGCTGCAGCAGCTGGTTGAGGGGCACCAAGAACCCTACCTCCTTCGCTGGGACCAGTCACGAAACCAGGTACAGGTTGTCCTGAGTCAGATGGCAGGACCTAAAGCCATTCTAAGGGCTGCCACTCACGGGCTGGTGCTTGGAGCCCTGCGGGGAGATGGACCCCTCCCAGAAGAGCTGGAGGAACTGAGGAACCAAGCACAGGCAGGTCCTGAGAAAGAGAGCTGGGTCGTTGTCAGGGAGACACACCAAGTGCTGGACAAGCTCTTCCCAAAGTTCTTGAAAGGTCTACAGGATGCGGGCTGGAGCACTGAGAAGCACCAGCTAGAGGTGGATGAATGGAGGGCCACGTGGCTCCTGTGCCCAGAGAAGAAGGTCTTGTGAGCATCCCTGCCAAAGGCCCAGGTCTCAGGACAGGGGCTTGGAACAAGGACACTC EMBV3_31658 CCAGGTCAGGCTTTTGTGCCCAAACCAGAGAATGTTATTCCCTGAAGCTCGGCGATTAGA Variant GeneID:533438|TFB1M:NM_001114610:7_cdna 721^848 3 EMBV3_25816 GeneID:533438 9 GENE TFB1M NULL transcription factor B1, mitochondrial EMBV3_43754 GCTAAGGAGCAGTATCTCCAGCCTCCGTCTGTCTGAACCCCATGTTCTGTTTTTTGAAGC Gene BVT0102_163564 + 1 EMBV3_14409 GK000018.2:62679861-62683727 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02415 CAGTCAATGGGACTGTTGCCTACACATGCATCAGACTGGTTAGCCTTCATTGAACCCCCT Gene GeneID:523162|TMEM85:NM_001034547:67_cdna Constitutive 2 NULL GeneID:523162 10 GENE TMEM85 MGC127546 transmembrane protein 85 EMBV3_43065 CATCGGGTTTTCACCACAGCCTACTTTAACCCATTTCTGAGCCAAGCTTCAACCCTGAGC Gene GeneID:782690|TCF7:NM_001099186:20_cdna Constitutive 0 NULL GeneID:782690 7 GENE TCF7 MGC157143 transcription factor 7 (T-cell specific, HMG-box) EMBV3_33871 TTAAAAGAACTCTGTCATTGAGAAATTGTGGAACTCTTTGAATCTCTCGAAGAAGATTAT Variant GeneID:507703|SKA1:NM_001075327:62_cdna 250^374 1 EMBV3_42167 GeneID:507703 24 GENE SKA1 NULL spindle and kinetochore associated complex subunit 1 EMBV3_06247 CAGAATCCTTCCAATCCTCTTCAGCGTTTAATTCCAGGCCCTAACTTGGAGAATGAACCC Gene GeneID:540780|CASC4:NM_001081737:135_cdna UTR3_Alt 2 NULL GeneID:540780 10 GENE CASC4 MGC152117 cancer susceptibility candidate 4 EMBV3_24750 CGGCCATAGTCTCTACCGATCCCCAGAAGTCGCCTTTTCTGCTGGTTCTCGATGCCAGAA Gene GeneID:534696|BCMO1:NM_001024559:56_cdna Constitutive 0 NULL GeneID:534696 18 GENE BCMO1 betaCO beta-carotene 15,15'-monooxygenase 1 EMBV3_16154 CAACCGAGTGAAGGCCAAAGGAGCAGCTGTCAGATTGAACTTGGAAACAATGTCAAAAAC Gene GeneID:100138004|UGT2B11:XM_002688319:175_cdna Constitutive 0 NULL GeneID:100138004 6 GENE UGT2B11 NULL UDP glucuronosyltransferase 2 family, polypeptide B11 EMBV3_17455 TTCAGACCTGCATCTGTGTGTTTCTGATTGAGAGCCTCTGCCCCTCCTTTCTTCATGACC Gene GeneID:511041|ELP2:NM_001143864:85_cdna Constitutive 0 NULL GeneID:511041 24 GENE ELP2 NULL elongation protein 2 homolog (S. cerevisiae) EMBV3_23841 TCTTGGACTTCGTGGAGCAGAAATGTGAAGGCCATTTTGCAACCTGTATTGGCAGCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04143 ATGACATCAACATCGCCAAGATCGGCCTGCATGACCTCCGCTTCAAGATCACCATCATCC Gene GeneID:281588|ABCC1:NM_174223:288_cdna Constitutive 0 NULL GeneID:281588 25 GENE ABCC1 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 1 EMBV3_29504 GAATACAAGAAAGATGGGCTGAAACACATGCGAGTGAAGTTCTACATCCAGGGCTCGGAG Gene GeneID:614633|C17H18orf55:NM_001035453:121_cdna Constitutive 0 NULL GeneID:614633 24 GENE C17H18orf55 MGC127729 chromosome 18 open reading frame 55 ortholog EMBV3_25898 CTGGAAGGAATAGCCAAGTGGATTGTGGTCTAGCAGGACAGTGAGTTACTGCCTTCATGT Gene BVV0102_003127 + 0 NULL GK000025.2:36206860-36233861 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147054 TCONS_00147055 1 XLOC_089280 Coding TCONS_00147054 XLOC_089280 Coding Coding TRIM56 25:36228558-36236129 = TSS109816 7571 1 TCONS_00147054_6 755 0.0795139347510236 1 0 9.51795551102483e-06 1.59818338302131e-05 2.30573996977811e-05 1.61350055927622e-05 0.00016639372496441 1.01567673671751e-05 3.12177190943412e-06 0.000136120112156258 7.05178682746307e-05 2.05692527036029e-05 2.25692032081697e-06 9.67943327889525e-06 8.1547619912023e-06 8.61040832565644e-06 1.09237057351493e-05 0.00123353753211319 1.59601955193635e-05 0.000143141999703604 1.74567521385225e-05 1.27388136515976e-05 9.06208922102536e-06 0.000200705799354606 6.14221752863955e-05 0.000116323989044393 0.000155825090557516 9.96838838655257e-05 1.20458592402008e-10 2.8051777427368e-05 3.17644878923488e-05 6.35787623377113e-06 XM_005225100.1 TRIM56 PREDICTED: Bos taurus tripartite motif containing 56 (TRIM56), 0.0 1.365e+04 100.00 0.999735834103817 NM_030961.1 TRIM56 Homo sapiens tripartite motif containing 56 (TRIM56), mRNA. 0.0 2744 82.95 0.352397305507859 TCONS_00147054_6 sp|E1BD59|TRI56_BOVIN TRI56_BOVIN E3 ubiquitin-protein ligase TRIM56; 0.0 1442 96.82 0.998675496688742 8 coding 0 0 0 0 0.0645641097399917 0.621524998462432 -0.0283429284207126 0.736658693413899 ATGGTTTCCCAGGGCTCCTCACCATCCCTCCTGGAGGCCCTGAGCAGCGACTTCCTGGCCTGTAAAATCTGCCTGGAGCAACTGCGGGTGCCCAAAACGCTGCCCTGCCTGCACACCTACTGCCAGGACTGCCTAGCACAGCTGGCCGAGGGCAGCCGCCTCCGATGCCCCGAGTGCCGCGAGTCTGTGCCCGTGCCGCCTGCAGGCGTGGCCGCCTTCAAGACCAACTTCTTTGTCAACGGACTCCTGGATTTGGTGAAGGCCCGGGCCGGTGGCGACCTGCGGGCAGGGAAGCCGGCCTGTGCCCTGTGCCCCCTGATGGGGGGCGCCAGTGCCGGGGGGCCAGCCACCGCCCGCTGCCTGGACTGTGCCGACGACCTGTGCCAGGCCTGTGCCGACGGACACCGGTGCACCCGACAGACCCACAGCCATCGGGTGGTGGACCTGGTGGGCTACAGGGCGGGGTGGTACGACGAGGAGGCCCGGGAGCGCCAGGCGGCCCAGTGTCCCCAGCACCCGGGGGAGGCCCTGCGCTTCCTGTGCCAGCCGTGCTCCCAGCTGCTATGCCGAGAGTGTCGCCTGGACCCCCACCTGGACCACCCCTGCCTGCCCCTGGCTGAGGCTGTGCGTGCCCGGAGGCCCGGCCTCGAGGAGCTGCTGGCCGGCGTGGACAACAACCTGGCCGAGCTGGAGGCCACCCGGCTGGCTGAAAAGGAAGCCTTGGCCCGGCTGCGGGAGCAGGCGGCCAAGGTGGTCACACAGGTGGAGGAGGCGTCCGAGCGGGTCCTCAGGGCCCTCCTGGCCCAGAAGCAGGAGGTGCTTGGTCAGCTGCGGGCCCACGTGGAGGCTGCCGAGGAGGGTGCTCGGGAGCGCCTGGGGGAGCTGGAGGGCCAGGAGCAAGTGGCCAGGGAGGCGGCCGCCTTTGCCCGTCGGGTGCTTAGCCTGGGGCGTGAGGCTGAGATCCTCTCGCTGGAGGGGGCGATCGCCCAGCGGCTCCGGCAGCTGCAGGGCTGTCCCTGGGTGCCTGGGCCCGCTCCCTGCCAGCTGCCCCAGCTGGAACTGTATCCCGGGCTCCTGGACAAGAACTGCCACCTGCTGAGGCTTTCCTTTGAGGAGCAGCTGCCGCAGAAGGACAGCGGGAAGGATGGAGCCCGAAGCCAGGGAGGTGATGCAACACAGCCCCAGAGCAGGGATGGAGTTCAGACCCCAAATCAGGACAGAGCGCAGACACCCCAAGAGGACGAAGCTCAGCCCCTCAAGGCGGAGAGAGCTGAGACTCCCCAGGAAGATGGAGCCAAAACCCCGAAAGAGGGCAGAGCCCAGACACCCCAGGAAGATGGAGGAACCCAGGCCCGGGTGGGCAGCAGATCCAACAAGAAGAGGAAGTTCAAAGGCAGGCTCAAGTCCGTCTCCCGGGAGCCCAGCCCCGCCCCCGGGCCAAACCTAGAGGGCTCTGGCCTCCTCCCCAGGCCCATCTTTTTCTGCAGCTTCCCCACCCGGATGCCCGGGGACAAGCGCGCCCCCCGGATCACTGGGCTCTGTCCCTTTGGCTCCCGGGAGATCCTGGTGGCGGATGAGCAGAACAGGGCCCTAAAGCGCTTCTCTCTCAATGGCGACTACAGGGGCGCCGTGCCCGTGCCCGAGGGCTGCTCCCCATGCAGCGTGGCCGCCCTGCAGGACACCGTGGCCTTCTCAGCAGCCGCGCGGCTCTATCTCATCAACCACAATGGCGAGGTGCAGTGGCGCCGGGCGCTGAGCCTCTGCCAGGCCAGCCATGCTGTGGCCGCCATGCCGAGCGGGGACCGGGTGGCGGTCAGCGTGTCCGGCCACGTGGAGGTGTACAACATGGAAGGTAGCTTGGCCACGCGGTTCATCCCTGGGGGCAAGGCCAACCGGGGCCTGCGGGCACTGGTGTTCCTGACCACCAGCCCCCAGGGCCATTTTGTAGGGTCCGATTGGCAGCAGAATAGCTTGGTGGTCTGTGATGGGCTGGGTCAGGTGGTTGGGGAGTACCGGGGACCTGGCCTGCATGGCTGCCAGCCGGGTTCTGTGTCCGTGGATAAGAAAGGCTACATCTTTCTGACCCTTCGCGAGGTCAACAAGGTGGTGATCCTCGATCCGAAGGGCTCGCTGCTTGGCGACTTCCTGACGGCCTATCACGGCCTGGAAAAGCCCCGGGTGACCACCATGGTGGACGGCAGGTACCTGGTCGTGTCCCTCAGTAACGGCACCATCCACGTCTTTCGGGTCCGCCCTCTTGACAGTTAAAGGGCTGGGAGTGGGGATGGGACTGGGTGGGGGGGGGGGCAGGAAATGAAGGCGGGGAGAAGGCAGGCAGGGCCGCCCAGGAGATGTGGCGGCCAAGGGCATTTTCTCGGAGGGCAGGGGTTGACAGCTTTTCACAATTTGAAGTGCCAAACCCCTGTGCAGGTGCAGGGATAGGGACCAAGCAGGGTTGGCATGACCATAATTCTCAGAAGCAGAGGAGGAGGGGTTGGAGAGGTGCTGGGCATTAACGCCTCTTGCTTTTGAATTCGGGGAGGGGGGGGTGTGGTGACTGCCACTGCCGCTACCATAGAGTCTAGGTTTCCAAGATATGTAAACTAGTTCTGATTTGCGTTCTTCTTCAAAACCATTCCTGATGGGGTGGCCCGAGGAGAGGCCTGGGGAGGTGGGTAGAGATTGTCCTTGGAGCCAAGAAGGGCTCAGGTTATGTCGATTACGTACTTTGCAGAAGAGAGCTGAGAACCCGTTCTTCTCCAGCTGGAAGGGGACAGGCTAGGTTAGCAGGGGCCTGAGATTTTGAACCCGGCAGTCAGTGGCATCTTTCACCGCAGAGACGGAAGGGCTGAGGTCATTCATTGCCTTCAGCCACAGCCGGCACATTGCGGCTCCTCCTCCAACAGTAGCACCCCCCAGTGAAGAACAGGGTGGGCTTTGTGGGGGACCAAGTGCAGACACTACCCCAGGGCAGTGGATGTTCACCTTAAAGCCCCTGAAGAGAATGTGCTGTTAGAAAACGGAGCTGGTAGGGCTGGAGTCTAAAACGCAGCGCTTACCTGGGGCCTTCCCTCCAACTTCCCTCACCTCTCACCTCCAAGCCAGCCTGAGGTCAGACCTCTGTAGAATATAAAGTCTCTTCTGTTTTGATGTCTTAATACTTCCTGGAGTTTATTTTTAGCCCCTTCTTAGTTTCCCAGCACAACTCCTTTTGAGAAATTCTGGCTGAACTAAGGTGTTAAAGGCATTTTTGTCTGTATTGCTATTATGGGTGGGGAACACACCTAATCCTAGAGGCCAGGTGTGGAACTCAGGGGCCAAACCAGTTGGAAGACCTGAGAAGTCAGTAGTGGGGCTGACATGGGCGGAGGAGTGGAAATTGCGTGGAGGGTTCGTGTCAGAAGTGAGCTGTAAACACGGGCCCTTGGCATGGGCCGTGGCAGTGCTGGAACTGAGGCGGCCATGGCTAGCCAGGGGCTGGTGAGAGATGACCAAAGGGAATCTTAATGTAAGGATCATGGACTGTGAGTGGTCATGGGTACCAGAGAGATTTTGGACAAGTCCAGATGGAAAGTACAGGACGTTAGGTGGAGGGAAAAGAAAATCTTTTTCCAGGGAGGTCGTTGATTTGTTTCATGAAGTGAAGGAGGAAATAATCAATGTCGAGTGGATGGATTCAATTACATAAAATTTTGAGATGTGTGCACAGCAAATAATAATGAAGATTAAAGGAAAAATCGACGAGGGGAGGAAATTACAAAGCGTTGATCTGAGAGCTGAGTCTCGAGGGTATACAGTGACTTAAAGAGATCTTCTTGGTCAAAGGACCAAGTAAGTTGGGTCCCCAGAAGGGAATCTACACAAGCCAGAACACATAAAATGAAAAATCAAATCAATCATTTGCATTCTTCAAAAAAATATTTTTGAAGCTATATCATGGGGAAATAGGCTCCTGGCATGATAAATGCTGCTTCCTGGAGATCGGTTTGGCAGGACTTGACAGGAGTCAAAGAAATGATTGTAAGATGAAGTTACTTCACATTGGGGAATACATTCTGGGAAAAGAACTGAAAAAGGAAAAGGATTTGCAGATAGGTATTTGTGACCACGCTGTATATTATAGTCATTGACAGGAAACAGCTCAGCTCTGGAAGGAATAGCCAAGTGGATTGTGGTCTAGCAGGACAGTGAGTTACTGCCTTCATGTATGACAACTATGAGAACTATTTAGATGATTTTGACTGATGCAATCATAAGCAAAAAAAAACTTTTGGATTTCTGATCACATCATTATAGCAGCAAGGTAAAAGCATGTCTGAATAGTTTACTGAGTGTAAACAGGTTCAAAATGTGTAAATAGTGACAGGGGAGGTTGGGTTCTTTTTGAGTTATTTCCTGCTGTTATTTATATATGCACATTTCTACTTCAGTTACTATTGTCCATTAAATAACATATATGCTTAACTGTTTACTGCAGAAAAATACACCTCTATAAATGATATTCAAGAATAACTCCTGGATTTGCAAATGAATGTCAGAATACATGAGACTGTTCTGGCGGGGGTAGGGGTAGAGCAGGAGCAAGGGGGAAAATCCTGGTGGGTCTGGACCCAGCAGGGAGGAAAGGCTAGCAGATCAGGGGCCTGTTTGGTGGCTGACCATGGAATGTGCCCTGGGAAGGATTGCAGTGGTCAGGCAGTCCCCACGGATGATCTGTCATTGCAGAACGTCCAGAGGCAAGAGACGGTCTTATTGAGTTCACCAACTCATTCAGACCAACTGGAAACCGAGTTGTGGTTCCATGGAACCAGGTGGTATAGGATGAGTTGCACGAGTGGGGAGACTGTGTCTGTCTTCTTTGGAGCCCTCTCTACAGAGTCAGCACAGTGACGGCTCCTAGTAGGTGCTCAGTAAACATCTGTGGAGTGAATTGGTGTCTAGTAAACAGTGGGACCCACCAAGGTGTCCAAAACCTTGGTTTGTGGGAAATCTCCAGTAGGGGGCACTGTGGACTCAGCCTATCGTAAGCCTTCAGGAGCGTGACTCAGCTCTGAGTCACAAAAGAGATGAAATCGGGGTGTCCTGCTTATGTGTCCTGGGGCGTTCTGGCCTCTAAGGGATAAATACCTTCAGGTTAGAACAACAGTTTTGCAGAGCTGCATGGGAACCGTGTGCAGAGAGCCGGGCTGGTGGAATGGCTCCAGCCAGGAGGTGGGAATAGAGAACTTCAGAGGGGAAATACCACCTGGATACAGGAAGAGACTCCCACAGATGTTCTAAAGATGAAGCAGTTGCAGGGGACACCACGAGAGTCCTGGGAAGTCAGACGTGAGACAATTGGCAGAAGTACTGCGTTTTCCCGCTGCAGGGCTCGGTCGAGGTGGGAAAGCCACAGCCCTGGGGAAATGTGAGATGGATGGGAAGGATAGCACTGAGCATCATTTTGAAAGGAAAATCCCCAGCCTCCCAACTGTGACCTGGGAATCCTAACAAATCCTGGTGCCGAAAGCACCACCCAGCACTGGGACAAAGAGTTCTTGCTTCAACTACAGATGTTAAGAAATCAGGAACATCATGAAAGATATGACATCCCCCTCACACCCCCCGTATTGGACAGTGACAGTTAACTTGATCCATCATTCCTCTTCCTGTTTGGGACTTCCCAGATTGTGTACAAAAGGAGGATGCCATTTAGGTAGAGAAAAGGGAAGTAGAGAACCTCGTTCGTACTTTTGTGCCTAAAAGAGGAAATGAGTGAGGCAGCAGAGATCTGGGTTGAGTGCTGGCTTCCCTGGTGGCTCAGCTGGTGAAGAACCCACCTGCAATGTTGGAGACCTGGGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAAAAGGAAAGGCTACCCACTCCAGGATTCTAGCCTGGAGAATTCCATGGCCTGTATAGCTCATGGAGTCGCAAAGAGTCGGACAGGACTGAGCGACTTTCACTTTCACCTTCTTCCAACTAAACAGCTGTGTGATATTGGTCGAGCTCCCTAACCTCTGTGGACCTGTTTCTACATCAGTAAAAGACCCATCATAATATCCACTGTGCCCACCTCACAGGGTTATCGTGAGGACTGGCTGAGAGGCGTGGAGAATTTTGTACACCCTCACAGCTCAAACTGGAGGTCTTAGGAAAAATTTTAACCAACTTGTGTTCATAGTACTGAGTTAATGCTTTTCTGTCAGGGTAAGCCTGAAAGGGGATGTGGTATGCATGTATTGTGAGGGAGGCTCGAGAATGTCTGGGAAGAGCTGTTACCTGCTTCTCTGTTGGAGGAGATTCTTCAGTTCTGCCTTCCAGCATTTATTTGAAGAAGCCATTTGCTAAGACTCAACAGTGACCGTAGGTGCAGAAGGGACCGATGGCCATCTTGCTAAGGCTGAATTCTGCTCCTAAAAGCCAGCTGAGAATTAGGCTATACTAACCTGTATACTAACACGTAGAAGAAACGGCAAGAGTAGCCCAGTTTTGGTTTTTTTTGTAAGAGAAGATAACAATTTGGGAGGGATTCGCTCTCCTTTTGCCTTAGTCTTATTATTACTGTATCTATAAAGCCATTCATAGAATAATCTACAGAGATAATATTCCAGTGGGGCCGATGTCCAAAAGAGAAGTCAGAAAACTTCCAAGGAGGTTGATAAGGTTGGTGACCTGAGCTGGGCAGGATGTGGTAAGTGCGTACCAATATCAAGGTATTTTGATCATCTCTCCCAAGCTTCCCTGGTGGCTCAGCGGTGAAGAGTTCACTTCCTGGGTCAGGAAGACTCCCCTGGAGAAGGCAACGGCAGCCCACTCCAGTATTCTTTCCCAGGGAATCCCATGGACAGAGGAGCCTGGTGGGCTGCAGTCCATGAGGTCTCAAGTCGCTAAGACACAACTTAGCGACTACACCAGCACCCAGGAGGGTTAGCTGAGAACTAAAGCCACCTGGAAGTTAAGTGGGAGGTTGGACGCAGGTGCAGAGTTCTGTCTGGGGGAGAAAGTAGCCTTGGACTAACTGGGGCAGGGAGCTGTGAGAGACACTGCTCAAGAAGTTGTTCCCCACAGAAGGATCAGGTTCAGATGTAGGCTTAGAAAGATAGGTAACTTGACCAAAGGCAGCAGATCAAGCCAGCCCAACTGGTTCATGAATATAGTTCAATTACATGAATCCAGATGGGAACAGAAATAGATTTAGAGTGACTGGAACGTGGAGAAGGCTCAGCAGGGTCTGGCTGACCTCACCCAAAGCCTAGGTGAGGAATCTGGGACCAGGCAGAGAAGGGCTGTAAAGGCAATTGGGAAGTAGTTTGGGGAGGTTTGGGAAGGCAATCTGACTTCTCTTCGGAGGAAGTTTCGAGCTGACTGGGTTAGCAGCCAAGGGAGATGGGATTGAAAATGGAACTGGGGCCTCCGAACCCTTGGTGTCGGCTCAGCAAATATTTCTTAGTTGCCACTGGCCTGAAGAAGCTATGTTGTAAACTCTTTGATTCCTTTGATTGTGTACTTTATATTCCCCCCCCCCCCCCGTTTCTTAATAAATTCCTTTGAAAAATGTGAAC EMBV3_34570 CAGCCTGGGCTAAAGCTCTTACAGACATTAAAGCAGCTACCGGTTCCAGTATTGTCCAGG Gene GeneID:615728|SYPL1:NM_001110088:15_cdna UTR3_Alt 3 NULL GeneID:615728 4 GENE SYPL1 MGC137623 synaptophysin-like 1 EMBV3_32684 ACCGTGCGCGAAATTGACCCCCAGAATGACCTCACTTTCCTTCGAATTCGCTCCAAGAAA Gene GeneID:513342|DYNLRB1:NM_001034442:1024_cdna Constitutive 1 NULL GeneID:513342 13 GENE DYNLRB1 MGC127103 dynein light chain roadblock-type 1 EMBV3_34224 CTGCAGTCTGGACCCTGCAAGAAGCCACAGCCCATTCTGACATAAACCTGGAAGTACAAA Gene BVT0102_052339 + 0 NULL GK000001.2:72608811-72670962 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09031 ACTGGCCCAGCATTTACCACACAATGGCCTGAATTCCACGTTTCTGAAGATTTTAATAAA Variant GeneID:614729|WDFY1:NM_001046542:178_cdna 257^330 2 EMBV3_25841 GeneID:614729 2 GENE WDFY1 MGC137087 WD repeat and FYVE domain containing 1 EMBV3_13686 ACAACAGCCCACCCTGTGCCAGCCAAGACACTTCTGCGACGTTAAGCTGTAGCTCATAAG Gene BVV0102_049429 - 0 NULL GK000019.2:54710107-55117932 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38470 TTCTGTGATGCAGGAATACACCCAGTCAGGGGAGCTTACTTTGCCTGGAAAGCCACAGCA Variant GeneID:539141|PSMA2:NM_001034662:58_cdna 398^479 5 EMBV3_17999 GeneID:539141 4 GENE PSMA2 MGC127174 proteasome (prosome, macropain) subunit, alpha type, 2 EMBV3_17510 CAAGAGTTAGGACCACCCTCCAGCCCATCTCTTAGCCCTGCCTCAAAGACAAGAATGTCA Gene BVT0101_000826 + 0 NULL GK000019.2:31796841-31857661 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093268 1 XLOC_057117 Coding TCONS_00093268 XLOC_057117 NonCoding Coding - 19:31840907-31843887 - TSS70012 2980 2 TCONS_00093268_5 98 0.127181208053691 1 0 0.00349502904530348 0.00191190048086425 0.00241054087848875 0.00210947369587934 0.00144028729625569 0.00101309907799946 0.00158121531566711 0.00110355185695454 0.00180308363470933 0.00110299636076398 0.000175145887921385 0.000116389892204572 0.000394767770604605 0.0022054180599933 0.00104051185878567 0 0 0 0.00193983694176603 0.00271006603109197 0.000807829518136238 0 0 0 0.00268070765067692 0.00135791494321616 0.00137434420151756 1.61161185393066e-05 0.000109147354648427 6.05259350752786e-06 0 noncoding 0 0 0 0 -0.927988227991159 0.0791957286237118 -0.105162027218636 0.164701553789156 GGGTCCGGCGGCGCGGGGAGGTGGGGCAGTGTTGGGCCTGGTGGGTCGGCTTGACAGAACTGAGCCTGCCCCTCCCGGGGCTCTGGCTGTGCGAGATACTGAATCTCTTTTCCTGGCCGGTTTGTCGATGTGTTAGGTGGCGGGGAGAGATCGGTAGGGGTGGGGGCCGCGGCAGGGAAGGTGCCGGTGGAATGGCGCGGCAGTCGCTCGGTCCTGAAACTGATTTCAGTTGGGGGGGGGGGGTTGGCGGGGGGGAAGGGGGGGTGACGGTGAAGGCTGCAGAGGAGGAGGCCCAGCTCCTCTGGAAGATGAGATAAGCAGAAAGAAGATCACAGCCAGGTAGGGGAGGCCGGGGGCGGGGTGGGGAACCCCGGCCCCAGAGTTGGAAAGAACCGGATCCTAGCGCAAGACCCCGCCGCCGGCTGTCATCACCAAAATGGGCTACATCTGGGCTAGTGTCTCCTGGGGCCGCTGTGTGGGGTGCCGGCGTCTATTCTTGTTACATAAGGGTTCTGGTGGGTCTCTTCCCAAGCTCTGCACACAGACTGGTTAGTAGAGAGGGTTTTTCGTGAAACTTCTGTCCCTGGAGAGAGATTTCCGTTGCTTCTGTGGCCAAGGAATTTGGGTGCGCTGTCTTAAGGCCAGCGAAAAGCAGAGAACCCAGTCTTGGGTGCAGTTCAAGTACGAGCTCAACACCTCGAGGGCCCTCCACTAGGTTTACCAAGAAACCGAATACCTTTATTGGGTGGGAAATGGAGCCCCAACTGGCATCTGGCCAGTCGGGAGTGGGGACCTCCCCGGGGGACACTGAACACCCTTGTAAGCACACTGCCCTAATTACGGTGGGCATTTGAGGGCAGGGGGGTGCCGGCAGCTTGTTAGGCTTCCAGATGGCTCCCAAGCAACCATGTCTAAAATGGACTTGGATACATTTTCCTTTTTCCCAAACACATGTGCTTTCACATTGGGGAGAATTTATGAATAGCAGAGTCAGATTAGCCCAGATTTCTGGCATGGTATTGCCACAGATAGAGCCTCACGTGGGCTGCTTTTCTGTATGTTGGATGTGGAAACCGTGTTTTCCTGTCTGGGTCATTTAGCAGATGATGGTCCAGTTGACCTGTCTTTAGTGAATGACTTCTGCATCACCCCAGGGGCTGGCATGGATCTTCAGGTCTTCACACCAGACCAACGACGTGACCAGGGACCCATAACCTTAGACCTGGATCTCCCTTCTCACTTGGTCTTGAGGTTCCACTTCGGTCATCAAAGCAAAATGTTAGCAAGTTGTCATGCTTTCGTCCCAGTATCCCTAAAACATAGCTGTCTCTCTTCAGGACTTGTTTCAAAGTAGGAAGATTTACTACAAAACTTGGGCATAAAACATGATTTCCAGCCTCATCCATGGATGGAATGACCAAGGGAGAATGGAGGTTGGGTTTCAGAATAGGTACCAGGTGTTCTTACTGATTTAAAAGCATATTCTTGGAGCTCCAAGCAGCTGGTCACTAAGAGGTACTTTCCACTTGTTTATGGAGACACTGGTGGTTGCTGGCGTGTGGGTGAATTTTGACTCTTTATCAGGTAGCGTTGGGACCAGTCCACTATTGTGTTAATCACTAGTCTCTATCCATTTTGATGACGTTCTGAGTTGAGTGAACCTTTTAGGGCAAAAGCTAGTTTGTATTATTTTGCTGCTGAAAAGCCTCCAGTGGCCTTTCATTGCACTGAGTGCCCCAAATCTTTCCGGGGGCCTATAAGACCTGGCCAGACTTGACTCCCTTCTGGTCTTTTCATTCTCATTCTGTTCCGCCAACCCCACCTCCTTTGTGCTCCATCGACAGCAGCCTTCCTTGCCCCAAACGCACCAAGCTCATTTCTATCTGGGGATCCCACTTTTCCTGCTTGCCTAAGGGTCTGCTCTTCCTGCATGCCTCTTCCTCTTCATCCAGGTCTTTGCTCAGAGACCTTTGAGAGGTCCCCCTCCCCTCTTCCCACTCCCCCCATCATCTTGTTCATTTTTGTCACAGCACTCATCACTCTTTGAAATTCTCTTCTTTTTCATTTTTTTGATTTCTTACAAGCACAAAACTGTAGAATGTACTGACTGCCATTGTATGCTCAGTGTGTATAGTGCAATGCCTTCTAGACCATTGGTCCTCAGTTCATGGTTATTTAATCCAGTTGACTGTGGGGTCCATGCAGTAAGTAAAAGGGGACAACGTTCACTTTCTCTTGCGGAGAATGTACCAAGGCATGATCCTAATGCTGCTTCTTAATTTCTTGACTCGGTAGAAGCAGTGGGATTGGATGCTTGGCATTTAGGTGTGGGGTTGGTGGACCACCTATTGGTGATGCTTTAACAAGCCACTGGATGCTTGCCCTGTGTGTGTCTTTGAAAGGATGACATTCTTGTCTTTGAGGCAGGGCTAAGAGATGGGCTGGAGGGTGGTCCTAACTCTTGGCATTTCATCTGGCTTGCCTTCTGTAAGTTGTAGGTTCTGGACGTCTTCTGAATATAAAACTGCCAGGGATCAGATCCAGTCTCTTTAACAACGAGGAAATGTTCTACTTACACATACCTTATGGAGTTAGCAGTATTTTCTCTTGAAGTGAGTACTTCTCTGTAGAGAGGGTGCCAGCAACTGGGAAAAGTTTCAAGCCCACTGCAGTTAACTAGGAAAAGTGTCATCTCCTCCTTGGTTTGCTTCTCCCATCTGTGCACACATTCCTTCTCCTCTCCGTTCACTTCAGCCCATCTCTTGGGAAGCATCTCTCGTCTTTCCGGACTGTACCACCAAGTGCCTCATGGTTCCAAGTAGCACTGGCTTTCGAGTGGGATGGATCTGGCTGGTTGGTTACTGACTACAGGATCTTGAGCTGGGCTCTGCTCCTTAGTTTCCTCATCTGCGAAATGGGCATAATAAGGGTTGTGCTGAGGTGATGTAATAGGGAGGGACCTTTTGTATTCTATGACAAG TCONS_00093269 s 5' 0 TCONS_00093269 s 5' 0 EMBV3_30801 GTCCAGCCCACTTTTAGGAAGAGCCAGGAGACTCACTGCAGTTTAATGCATCTCTTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29740 GCCCACCCACACACCAGACAAGCTCTTAGGGGAGCAGAAGAAAAAGCAGGAAGAATTTAA Gene GeneID:508442|BAZ1B:XM_002698188:714_cdna Constitutive 3 NULL GeneID:508442 25 GENE BAZ1B NULL bromodomain adjacent to zinc finger domain, 1B EMBV3_27525 CTGGTGTCACTTCCGTGCTCTACTAGTGTCTTTCCCTTCCTGCTTTGGATTGCTGTTGTC Gene BVV0101_032131 - 1 EMBV3_32370 GK000029.2:26492051-26506378 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16024 CACTCTGTGGCGCAATATCCCTATTTGTAGCTTGGTTCCAGTGACAGAAGCAAGCGTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27639 ATGGCCAAGAACAAACTAAGAGGGCAGAAGTCCAGGAATGTATTCCACATAGCCAGCCAA Gene GeneID:783459|LOC783459:XM_002684631:31_cdna Constitutive 0 NULL GeneID:783459 1 GENE LOC783459 NULL similar to MGC133577 protein EMBV3_38843 GTGCTGGCCATAACGCGTCTATGTGCCTCCTGTGAGGGCCTGATGTACATACTGCCTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03232 GGTCACCCAGTTCTCAAGAGCAGCAAGTAACACTCTTCCTCTCTCCAGCATCCATGTCTG Gene GeneID:538523|NFAT5:XM_002694839:748_cdna Constitutive 0 NULL GeneID:538523 18 GENE NFAT5 NULL nuclear factor of activated T-cells 5, tonicity-responsive EMBV3_26305 CAACCAGCCATCATGACATTTACCATGAATTTCCTCCCTCAAGAATTTGGACTGCCCGTC Gene GeneID:532715|IQGAP1:XM_002696571:183_cdna UTR3_Alt 2 NULL GeneID:532715 21 GENE IQGAP1 NULL IQ motif containing GTPase activating protein 1 EMBV3_17883 TATCTCAGCCATGAGGAAGGTCGTGTTGCAGTCTTTTTCATTGAGTCCATTTGTAATGAC Variant GeneID:282304|PFKFB1:NM_174572:8_cdna 551^625 1 EMBV3_38885 GeneID:282304 X GENE PFKFB1 NULL 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 EMBV3_15513 CCTTAATGTTTCTGTCATTATGTATCACAAAACATGTAAATAAGAGCAGGCACATCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23606 CCTAGGCCAGGGGCACCTCTGGTGTGGCAGAAGGTGATTGAATTACTCAGATATGAAGAT Gene BVV0102_056040 + 0 NULL GK000020.2:22098039-22138994 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114769 TCONS_00114775 TCONS_00114782 TCONS_00114789 TCONS_00114783 TCONS_00114777 TCONS_00114778 TCONS_00114794 TCONS_00114771 TCONS_00114772 TCONS_00114776 1 XLOC_069349 Coding TCONS_00114794 XLOC_069349 Coding Coding GPBP1 20:22050271-22099888 j TSS85515 1748 1 TCONS_00114794_4 162 7 0.964910512737826 0.0521290590690216 0.0434039233618348 0.0414902418383191 0.0284138282924311 0.0446476098516834 0.0134821631183854 0 0.0181352660355044 0.0516440610645105 0.0124720953375519 0.00738703770330248 0.00566344505915767 0.00800331078242818 0.0169465432110619 0.0139188148731353 0.0382282317431182 4.93870850733021e-18 0.00739577812055937 0.0400886884617281 0.0303904832533055 0.0103495686959244 0.0118399609818885 0.00638677324021677 0.00822217534543234 0.0465990269591894 0.0269638919473471 0.0110263524066603 0.00566738749885014 0.00375878064435031 0.00252471642490223 XM_005221503.1 GPBP1 PREDICTED: Bos taurus GC-rich promoter binding protein 1 (GPBP1), 0.0 3137 99.89 0.997139588100686 NM_022913.3 GPBP1 Homo sapiens GC-rich promoter binding protein 1 (GPBP1), transcript 0.0 2502 92.35 0.997139588100686 TCONS_00114794_4 sp|Q0P5K1|GPBP1_BOVIN GPBP1_BOVIN Vasculin; 1e-112 332 98.76 0.987654320987654 0 noncoding 0 0 1 1 -0.394904822199765 0.210556379716845 0.0309264357381095 0.536161408531332 CCGCCTTTCCCCTCCCTTATCCTCAGCCCTTTTAGTTTCTTCCCCGCCTCGCCACCGTCCACGATCTCGCGAGACTTGGCCCAGAACATTGCGGATCGGGTCGGCGCCATTTTGGGACTGAGACTGGTTGTGGGGGAGGGAAAAGCGGCAAAAGGGGATTATTCAAAGTACCGAAAACCTCCTCCCGGGATCGAGCGCAGCGGCACCCCTAGGCCAGGGGCACCTCTGGTGTGGCAGAAGGTGATTGAATTACTCAGATATGAAGATCATCTTCTAGGTTTTGTGTAAAAGGCCCCGGATATTTCAAGTGGCCATTTTGGAATTACAATGTTTTTGGATAATTTTACCCCAGAAGTTTATTAAAATTGGCAAGAATCATCTCTGAAGTGAATTGATAGTAGTGAACAGTTCTGCAAGCTACTTAAAAAGAGATCCAGGCATTTCTTCAGTATTTTGGTTCAAACGGATTATATAACTGGTTTAAAGTGTTTTCAGCTGGTGGTATTTTTGCCTTCCCCCCAACCCCTCCCCTCTTGTTGTTCTTCAGCCAAAACTGTAAGATATGTTTGATTTGTGTACTGAGTAGTTTCGGCAGTTTCAAATTACTGTTTAAATATTGCTGAAGTTTCATGGCAGTTTATTTTTACCTTTATTAAAAGTTTTAGGAATTTTTGACCTCAGCCCTTTTCATGTCACAATGGGACCGCTTTTCTAAATGAAGACATTGAATGAATACAGAGTTTTTTTGCTTTTATCTTTTATTTACGTGGAAATTTAAGATGTGGCAGTTTCCCAGCAGCATGGTAGTATTGAGATAGCTGTGTGTCTCTTGTTTATGCTGATGTTTAGGAATGCTCTTCAGATGTGAAATTTTCTTTTTGTTTTTTCTTTTTGACTCATAAATTGGATTATTTCATCTGGAGTGGATAAGTACAACAGTGACAAATACATGGAATAATAAAGAAGACTTTAAAATCTTAAAATCCAAGGAACTTGGCTAATTCTGGCGATAGCCATATGAAAACTTTAAAACAGAAGTATGGGTAGCTGACTGAAGTAACTCTATGTCAAATAGCCATAGGTTAAGTGTCTTCAAAGAACTTGGATATTATTTCAGAGGATACAGAATAAAAAAACAAACTGGAAAACATAAAGATTACAGAGACAAATCCAACACCTTCCTGTGCAGTCCTGTTGGAATTTGGACTTGCCATGAGGTGTTGAAACCTTGTTTCGCTGAGTTGGAGAGACTGGACCTAAATGGCGCAGCATGACTTTGCTCCAGCCTGGCTTAATTTTCCTACCCCACCATCATCAACAAAGTCGTCATTGAATTTTGAAAAGCATTCTGAAAACTTTTCATGGACAGAAAATCGTTATGATGTGAACCGCCGACGACACAACTCTTCAGATGGCTTTGATTCTGGTATTGGACGTCCTAATGGAGGTAACTTTGGAAGGAAAGAAAAAAATGGATGGCGTACACATGGAAGAAATGGTACTGAAAACATAAATCATCGAGGGGGATACCATGGTGGAAGTTCCCGTTCTCGTAGCAGTATTTTCCATTCTGGAAAAAGCCAAGGACTTCATGAAAACAACATACCTGACAATGAGACAGGGAGGAAAGACGACAAGAGAGAACGCAAGCAGTTTGAGGCTGAGGATTTTCCATCTCTAAATCCTGAATATGAGAGAGAACCAAATCAGAATAAATCTTTAGCTGCGGGTGTATGGGTATTTCTACC EMBV3_28754 CCAGACTGCTTCTTGGAAATCGCCAGCTTGACTTTACAGGAGTTCTTCAAGGCTGTCTCC Gene GeneID:529720|PROX2:XM_002691059:481_cdna Constitutive 0 NULL GeneID:529720 10 GENE PROX2 NULL prospero homeobox 2 EMBV3_33610 GAGGAGGCCTGCACCATGAAGATGGGTGAAAAAGATCCCCAGGCTCAAACCTGTTCCCCA Gene GeneID:538586|UBXN10:XM_002685789:658_cdna Constitutive 0 NULL GeneID:538586 2 GENE UBXN10 UBXD3 UBX domain protein 10 EMBV3_03145 AGGCCACCATGCGGGAGCTGTCCAAAGAGATGATGAAGGCTGGGATCATAGAAGAGATGT Gene GeneID:507722|VPS24:NM_001035051:56_cdna UTR3_Alt 3 NULL GeneID:507722 11 GENE VPS24 MGC137735 vacuolar protein sorting 24 homolog (S. cerevisiae) EMBV3_36257 AGCCCCCCTGGGAATTTTGAGCACCTACCGCTACTACACCCCACAACCTTCATGATCCTT Gene BVV0102_157890 + 0 NULL GK000011.2:49934215-50400444 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00031749 1 XLOC_017994 NonCoding TCONS_00031749 XLOC_017994 NonCoding NonCoding - 11:49952381-49953337 - TSS22748 956 2 TCONS_00031749_2 65 0.565899581589958 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000104198355828444 2.6245721389176e-05 0 0 0 0 0.00107958247011665 3.50725217373226e-05 0 0 0 1.00472522434652e-05 0 0 NM_001099095.1 GZMA Bos taurus granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) (GZMA), mRNA. 3e-71 273 79.04 0.347280334728033 NR_027420.1 LOC389834 Homo sapiens ankyrin repeat domain 57 pseudogene (LOC389834), 3e-32 143 72.69 0.267782426778243 0 noncoding 0 0 0 0 0.167649932854023 0.247756966351776 -0.0388373733734533 0.703537909341059 GTGCCCTAGGATTACCTCCTGTGGAAGGGGAGGAAGGAAGTGAGACTGGGCAAAGGGAAGAGAGCTAAGATGGCTTCAGTCCCCCTTCGGGGCTCTGGAACTAGGGTTGTCCCAAAAGGGGCTGAGCAGGTGCCCTCTGCTGCTCAGGCAATACTGAAGGGCCTGACCCAAATCTGCAGACAATGCCCCCAGCCAACCCTCCCTTGAACTGGGATCTCGGCTGTGTTTCAAAGTGTCCATCCCAGGAGATTTAGGATAAGAATGGCTTCGGGCTGGAACCTGACTGCTGCCAGCAGCCCCCCTGGGAATTTTGAGCACCTACCGCTACTACACCCCACAACCTTCATGATCCTTGTGCTTCCTCTGTGGGTCTGGCCTGCTCTTTCCTGGGCACTACCTGGATCATCCTCACTGTGTTCTTCTGACCAAGTCCTGGAGGAGCTACTCACAATGACCTAGGTCTGGGATTCCCAAACCCTTCTGTGGGATACTGATACTAGAGATGCTAGCATGATCTTCACAAGCTGGGTGATATGTACACACAGGTTCATACTCTTCCCCCTTCCTTTGTGTGTGTTTCCAATCCTACTCCTGGGCATATACCCAGAGGAAAACATGGTCTGAAAGGATATATGCACCCCAATGTTCATTGCAGCACTGTTTACAATAGCTAAGACATAGAAGCAACCTAGATGTCCATCGATAGAAATGAATAAACAAGATATAGTACATACATACAATGGAATATTACTCAGCCATTAAAAAGAATGAAGTAATGCCCTTTGCAGCAATGTGAACGGACCTAGAGATTGTCATGCTGAATGAAATAAGTCAGATAGAGAAGGAGAAATATTGTATGACAGCTCTTATATGCGGAATCTAAAAAGAAATGATGTAAGTGAACTTATTTGCGAAACAGAAATAGACTCATAGACTTAGAGAATGAACTTATGGTT TCONS_00027912 TCONS_00027913 TCONS_00027914 . 5' 18168 TCONS_00027912 TCONS_00027913 TCONS_00027914 . 5' 18168 EMBV3_23052 TGGCGTGCCAAAAGTATCTTCAGTGGGCATAATCCTCGCCACATAAATGGCCTGACCAAG Gene GeneID:539815|B3GALT2:NM_001076188:17_cdna UTR3_Alt 2 NULL GeneID:539815 16 GENE B3GALT2 NULL UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 EMBV3_09269 TACCACAAGTGACCCCAGCCTATGGTGGTAGAAGAAGATGCTGGAACAACTCAGGGCACT Gene GeneID:100336211|LOC100336211:XM_002692283:1639_cdna Constitutive 0 NULL GeneID:100336211 13 GENE LOC100336211 NULL beta-defensin 118-like EMBV3_26395 ATGCCAGTCATCTTTGCGAAAGCCATACCAGTGGACAGACAGGAAACCACACACACGTAT Gene GeneID:497208|DNAH11:XM_002686722:81_cdna Constitutive 1 NULL GeneID:497208 4 GENE DNAH11 Bv1 dynein, axonemal, heavy chain 11 EMBV3_21818 GATACGGTACGCAACATTCAACAGTGGGGGATAAGCCGTCCTTTGATACGTGAATGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08205 TTCCTTGAACAGCAGCGAGACCCAGACTCGGCTGATTTAAACTGCAATATTCAAGACGAT Variant GeneID:536560|TEAD1:XM_002693050:335_cdna 655^828 1 EMBV3_32740 GeneID:536560 15 GENE TEAD1 NULL TEA domain family member 1 (SV40 transcriptional enhancer factor) EMBV3_39433 TCTGGCCAATGTGGTTCCCTGTTCTCAGTGGGATGAACTTGCTCGCCTTCTAGTGACTCT Gene BVV0102_171988 + 0 NULL GK000019.2:19046818-19116471 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095487 TCONS_00095483 TCONS_00095494 TCONS_00095486 TCONS_00095482 TCONS_00095493 TCONS_00095492 TCONS_00095485 TCONS_00095489 TCONS_00095484 TCONS_00095490 TCONS_00095488 TCONS_00095491 1 XLOC_057723 Coding TCONS_00095482 XLOC_057723 Coding Coding NF1 19:19017956-19240417 j TSS71173 5003 1 TCONS_00095482_8 1576 37 0.977676885732267 0.00189797567784748 0.000647423667450453 0.00297859739721648 0.00291215215836383 0.000645553250429649 0.00116645537139564 0.000872234375277646 0.00151819503381753 0.00262241801786982 0.000181139682891437 3.90008321108873e-37 2.65796015235985e-05 8.54897889102985e-05 0.000333788707507068 0.000257514361972761 0.00608365612392037 0.00289087437767316 0.00155930338894038 0.00277921159178119 0.00257434349749035 3.23263828759745e-20 1.45665118503676e-12 0.000784189707463063 0.000334281167359817 0.00577402002046923 0.00300047572490305 0.00103555393256715 7.45413643129141e-18 5.85289251497461e-14 0.000230502128390008 NM_001122728.1 NF1 Bos taurus neurofibromin 1 (NF1), mRNA. 0.0 3056 99.42 0.343593843693784 XM_005257984.1 NF1 PREDICTED: Homo sapiens neurofibromin 1 (NF1), transcript variant 0.0 7809 94.64 0.99940035978413 TCONS_00095482_8 sp|P21359|NF1_HUMAN NF1_HUMAN Neurofibromin; 0.0 3254 97.93 0.996192893401015 2 coding 0 0 0 0 -0.194282337349154 0.374003947713901 0.019400111787698 0.677036545177661 ATGGCCGCGCACAGGCCGGTGGAATGGGTCCAGGCCGTGGTCAGCCGCTTCGACGAGCAGCTTCCAATAAAAACAGGACAGCAGAACACACATACCAAAGTCAGCACTGAGCACAACAAGGAATGTCTTATCAATATTTCCAAATACAAGTTTTCTTTGGTTATAAGTGGCCTCACCACTATCTTAAAGAATGTTAACAATATGAGAATATTTGGAGAAGCTGCTGAAAAAAATTTGTATCTCTCTCAGTTGATTATATTGGATACACTGGAAAAATGTCTTGCTGGCAACCAAAGGACACAATGAGGTTAGATGAAACGATGCTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTTCTTCATACTTGTCGTGAAGGAAACCAACATGCAGCTGAACTTCGGAATTCTGCCTCTGGGGTGTTATTTTCTCTTAGCTGCAACAACTTCAATGCAGTCTTTAGTCGAATTTCTACCAGGTTACAGGAATTGACTGTTTGTTCAGAAGACAATGTGGATGTTCATGATATAGAACTGTTACAGTATATTAATGTGGATTGTGCAAAATTAAAACGACTCCTGAAGGAAACAGCATTTAAATTTAAAGCCCTAAAGAAAGTTGCACAGTTAGCAGTTATAAATAGCCTGGAAAAAGCATTTTGGAACTGGGTAGAAAATTATCCAGATGAATTTACAAAGCTGTACCAGATTCCACAGACTGATATGGCTGAGTGTGCTGAAAAACTGTTTGACTTAGTGGATGGTTTTGCTGAAAGCACCAAACGTAAAGCAGCAGTTTGGCCACTACAAATCATTCTGCTTATCTTGTGTCCAGAAATAATCCAGGATATATCTAAGGATGTGGTTGATGAAAACAACATGAATAAGAAGTTGTTTCTGGACAGTCTGCGAAAAGCACTTGCCGGCCATGGAGGAAGCAGGCAGCTCACTGAAAGTGCTGCAATCGCCTGTGTCAAACTGTGTAAAGCAAGTACTTACATCAATTGGGAAGATAACTCTGTCATCTTTCTGCTGGTTCAGTCCATGGTGGTTGATCTTAAGAACCTGCTGTTTAATCCGAGTAAGCCATTCTCGAGGGGCAGTCAGCCGGCAGATGTGGACCTAATGATCGACTGCCTTGTCTCTTGCTTCCGGATAAGCCCTCACAATAACCAACACTTCAAGATCTGCCTGGCTCAGAATTCCCCTTCTACATTTCACTATGTGCTGGTAAATTCACTCCATCGAATCATCACCAATTCTGCATTGGATTGGTGGCCTAAGATTGATGCTGTATATTGCCACTCAGTTGAACTTCGAAATATGTTTGGTGAAACACTTCATAAAGCAGTCCAGGGTTGTGGAGCACACCCAGCAATACGAATGGCACCGAGTCTTACATTTAAAGAAAAAGTAACAAGCCTTAAATTTAAAGAAAAACCTACAGACCTGGAGACAAGAAGCTACAAGTATCTTCTCTTGTCCATGGTGAAACTAATTCATGCAGATCCGAAGCTCTTGCTTTGTAATCCAAGAAAACAGGGGCCTGAAACCCAAGGCAGTACTGCAGAATTAATTACAGGGCTTGTCCAGCTGGTCCCTCAGTCACACATGCCAGAGATTGCCCAGGAAGCGATGGAGGCTCTGCTGGTTCTTCATCAGTTAGATAGCATTGATTTGTGGAATCCTGATGCTCCTGTAGAAACATTTTGGGAAATTAGCTCACAAATGCTTTTTTACATTTGCAAGAAATTGACTAGTCATCAAATGCTTAGTAGCACAGAAATTCTCAAATGGTTGCGGGAAATTTTGATCTGCAGGAATAAATTTCTTCTTAAAAATAAGCAGGCAGATAGAAGTTCCTGTCACTTTCTCTTCCTTTATGGAGTAGGATGTGATGTTCCTTCAAGTGGGAATACCAGTCAAATGTCCATGGATCATGACGAATTACTACGCACTTGTGCTCCTGGAACCTCTCTCAGGAAGGGGAAAGGAAATTCATCCATGGATAGTGCAGCAGGGTGCAGTGGAACCCCACCAATATGCCGACAAGCCCAGACCAAACTAGAAGTGGCCCTGTACATGTTCCTGTGGAGCCCCGACACTGAAGCAGTTCTGGTTGCCATGTCCTGTTTTCGTCACCTCTGTGAGGAAGCAGATATCCGGTGTGGGGTGGATGAAGTGTCAGTACACAACTTCTTGCCCAACTATAACACATTCATGGAATTTGCTTCTGTTAGCAATATGATGTCAACAGGAAGAGCAGCACTTCAGAAAAGAGTGATGGCGCTACTACGGCGAATTGAGCATCCCACTGCAGGAAACACTGAGGCTTGGGAAGATACGCATGCAAAGTGGGAACAAGCTACAAAACTAATCCTCAACTACCCAAAAGCCAAAATGGAAGATGGCCAGGCTGCTGAAAGCCTTCACAAGACCATTGTTAAGAGGCGAATGTCTCATGTGAGTGGAGGAGGATCCATAGATTTATCTGACACGGACTCACTACAAGAATGGATCAACATGACTGGCTTCCTTTGTGCCCTTGGGGGAGTGTGCCTGCAGCAGAGAAGCAATTCTGGCTTAGCAACATATAGCCCACCCATGGGCCCTGTCAGTGAACGCAAGGGTTCCATGATTTCAGTGATGTCTTCAGAGGGAAATGCAGATACACCTGTCAGCAAATTTATGGATCGGCTGCTGTCCTTAATGGTCTGTAACCATGAGAAAGTGGGACTTCAAATACGGACCAATGTTAAGGATCTGGTGGGTCTAGAATTGAGTCCTGCTCTTTATCCAATGCTTTTTAACAAACTGAAGAATACCATCAGCAAGTTTTTTGACTCCCAAGGACAGGTTTTATTGACTGACACCAATACTCAGTTTGTGGAGCAAACCATAGCTATAATGAAGAACTTACTAGATAATCATACCGAAGGCAGTTCTGAACATCTGGGGCAAGCCAGCATTGAAACAATGATGTTAAATCTGGTCAGATATGTTCGTGTACTTGGAAATATGGTTCATGCAATTCAAATAAAAACAAAACTGTGTCAGTTAGTCGAGGTAATGATGGCAAGGAGAGATGACCTCTCATTTTGTCAAGAGATGAAATTCAGGAATAAGATGGTAGAATACTTGACAGATTGGGTTATGGGAACATCAAACCAAGCGGCAGATGACGATGTAAAATGTCTTACAAGAGATTTGGACCAGGCAAGCATGGAAGCAGTAGTTTCACTCCTGGCTGGTCTGCCGCTGCAGCCTGAGGAAGGAGATGGTGTGGAGTTGATGGAAGCCAAATCACAGTTGTTTCTTAAGTATTTCACATTGTTTATGAACCTTTTGAACGACTGCAGTGAAGTCGAAGATGAAAATGCACAAACAGGTGGCAGGAAACGTGGCATGTCTCGGAGGCTGGCATCACTGAGGCACTGCACAGTCCTGGCAATGTCAAACTTACTCAATGCTAACGTGGACAGCGGCCTCATGCACTCCATAGGCTTAGGTTATCACAAAGATCTCCAGACAAGAGCTACGTTTATGGAAGTTCTGACAAAAATCCTTCAACAAGGCACAGAGTTTGACACACTTGCAGAAACAGTATTGGCAGATCGTTTTGAGAGACTGGTGGAGTTGGTCACAATGATGGGTGATCAAGGAGAGCTCCCTATAGCCATGGCTCTGGCCAATGTGGTTCCCTGTTCTCAGTGGGATGAACTTGCTCGCGTTCTAGTGACTCTGTTTGACTCTCGGCATTTGCTCTACCAACTGCTCTGGAACATGTTTTCTAAGGAAGTAGAATTGGCAGACTCTATGCAGACTCTTTTCCGAGGCAACAGCTTGGCCAGTAAAATAATGACCTTCTGTTTCAAGGTATATGGTGCTACCTACCTACAGAAACTCCTGGATCCTTTATTACGGGTTGTGATCACCTCCTCTGATTGGCAGCACGTCAGCTTTGAAGTGGATCCTACCAGGTTAGAACAGTCAGAGAGCCTTGAGGAAAACCAACGAAATCTCCTTCAAATGACTGAAAAGTTCTTCCATGCCATCATCAGTTCGTCCTCCGAATTTCCCCCTCAACTACGAAGTGTGTGCCACTGTTTGTACCAGGTGGTTAGCCAGCGTTTCCCTCAGAACAGCATCGGTGCAGTAGGAAGTGCCATGTTTCTCAGATTTATCAATCCTGCCATTGTCTCACCATATGAAGCAGGGATTTTAGATAAAAAGCCACCGCCTAGAATCGAAAGGGGCTTGAAGTTAATGTCGAAGATACTTCAGAGTATTGCCAATCATGTCCTTTTCACAAAAGAAGAGCATATGCGGCCTTTTAATGATTTTGTGAAAAGCAACTTTGATGCAGCACGAAGGTTTTTCCTTGATATAGCATCTGATTGTCCTACAAGTGATGCTGTAAATCATAGTCTTTCCTTCATCAGCGATGGCAATGTGCTTGCTTTACATCGTCTACTATGGAATAATCAAGAGAAAATTGGCCAGTATCTTTCCAGCAACAGGGATCACAAAGCTGTTGGAAGACGACCTTTTGATAAGATGGCAACACTTCTTGCATACCTGGGTCCTCCAGAGCACAAACCTGTGGCAGATACACACTGGTCCAGCCTTAACCTTACCAGTTCGAAGTTTGAGGAGTTTATGACTAGGCATCAAGTACATGAAAAAGAAGAGTTCAAGGCTTTGAAAACATTAAGTATTTTCTACCAAGCTGGGACTTCCAAAGCTGGGAATCCTATATTTTATTATGTTGCACGGAGGTTCAAAACAGGTCAAATCAATGGTGATTTGCTGATATACCACGTCTTGCTGACTTTAAAGCCATACTATGCAAAGCCATATGAGATTGTAGTGGACCTTACCCATACTGGGCCTAGCAATCGCTTTAAAACAGACTTTCTCTCCAAGTGGTTTGTGGTTTTTCCTGGCTTTGCTTATGATAATGTCTCTGCAGTATATATCTATAACTGTAACTCCTGGGTCANN EMBV3_05429 TGAGGCAACACGTGGACCCTGATGAGACAGGAGGCAATGACAGCTACTGCAACTTGATGA Gene GeneID:783195|LOC783195:XM_002690653:198_cdna Constitutive 0 NULL GeneID:783195 10 GENE LOC783195 NULL similar to ribonuclease, RNase A family, 4 EMBV3_17585 ACGGACGTCTTGAAGGAACTGCCATCCCTTGCTTTGACCACTGCATGGACTGCTTCTAAA Gene GeneID:519500|C6H4ORF31:XM_002688032:31_cdna Constitutive 0 NULL GeneID:519500 6 GENE C6H4ORF31 NULL chromosome 4 open reading frame 31 ortholog EMBV3_41096 CCTGGGATTTCACTGCTTTGGTGACTATGATCTGAACGTAAACATCTGCTTAGGAGGGGC Gene GeneID:537560|RAB39B:NM_001076095:17_cdna UTR3_Alt 1 NULL GeneID:537560 X GENE RAB39B MGC139619 RAB39B, member RAS oncogene family EMBV3_26261 GATCTCCAACGACCAAAGGAGCTTCTGCCACTGGCTGTTCTCCAAATTCTGCCTTGGCCA Variant GeneID:538690|ID3:NM_001014950:239_cdna 404^713 4 EMBV3_34701 GeneID:538690 2 GENE ID3 NULL inhibitor of DNA binding 3, dominant negative helix-loop-helix protein EMBV3_19408 CCCAGGCAAAAGAGGCCCCTGCTCTGGTTCCCATGTCTTATAGGTCTGCATGTTATCACA Gene BVV0101_019660 + 0 NULL GK000006.2:30064807-30361388 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09668 TTCTTCAAGTAACACACTTGGGATCGACCTCTGGAGGGGGAGAAGGTGCTGCTCAGGAAA Gene GeneID:768041|MGC137454:NM_001077100:70_cdna Constitutive 0 NULL GeneID:768041 3 GENE MGC137454 NULL hypothetical protein MGC137454 EMBV3_18383 CTCAGTGTCCGCAAGTCTCTTGTCTGCATCTTCGTCTCCATCCCTTCTCGGCAAATTCCA Gene GeneID:100294818|LOC100294818:XM_002694271:277_cdna Constitutive 0 NULL GeneID:100294818 16 GENE LOC100294818 NULL hypothetical protein LOC100294818 EMBV3_32972 CCAGTTTTGGTACCTCCTCTGGCTTCTCCAGTCCTGCTCACTACTCTATTTTTAAAGTGC Gene GeneID:530352|SLC39A1:NM_001035381:162_cdna Constitutive 0 NULL GeneID:530352 3 GENE SLC39A1 MGC127647 solute carrier family 39 (zinc transporter), member 1 EMBV3_31787 TCCAGGTGGTTTATTTTTATTACGCTGACCCAGGACCCCACCACGTAGGCCGCTGCCCCT Gene GeneID:281948|NR5A1:NM_174403:2_cdna Constitutive 0 NULL GeneID:281948 11 GENE NR5A1 SF-1 nuclear receptor subfamily 5, group A, member 1 EMBV3_25982 TCAGGCCTTAGCATTTAACGATGGGATGAGCGAAGTGAAGGATGAGCAGACCCCAGGCTG Gene GeneID:531085|ZFP161:XM_002697794:389_cdna Constitutive 0 NULL GeneID:531085 24 GENE ZFP161 NULL zinc finger protein 161 homolog (mouse) EMBV3_25916 GAACTTCAGCAACAGCAAAGCCGAGCAGCAGATCAGGAACAACGAGCTAATGACTTGGAA Gene GeneID:100301027|LOC100301027:XM_002685077:213_cdna Constitutive 0 NULL GeneID:100301027 1 GENE LOC100301027 NULL hypothetical protein LOC100301027 EMBV3_19445 GTGGCCGTTCAGCAGCACAGCGATTTTGGAACTTTGATGCACAAACAATAAGACCTAAAG Gene GeneID:100138743|LOC100138743:XM_002699943:111_cdna Constitutive 0 NULL GeneID:100138743 X GENE LOC100138743 NULL similar to Pol protein EMBV3_12719 CTGGGCACTCTTCACCAGCACATGGACACAATTTATTCTTTGATGGGAGCCATGCTCTAG Gene BVT0102_142173 - 1 EMBV3_16811 GK000005.2:66128522-66168578 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25887 TCCCTTCAAGAGCAGGAGAACGTGTCGAGTGGCTACTGTTTCCCGTGTGATGCTTCCATT Gene GeneID:511442|TSG118:NM_001166606:335_cdna Constitutive 0 NULL GeneID:511442 25 GENE TSG118 NULL protein C16orf88 homolog EMBV3_37596 ACCACCTCCGCAGACACCCCCAAACAAATTGCAAGCTCCATCGTTCAGGCAGTAATGCTT Gene GeneID:519449|ZNF516:XM_002697653:57_cdna Constitutive 0 NULL GeneID:519449 24 GENE ZNF516 NULL zinc finger protein 516 EMBV3_34814 AGGGAGAGACGGGTGCCGCTGGACTGAAGGGAACCAGTGAGCTCCGGGTAGACCTCATGG Variant GeneID:497016|FCN2:NM_001010996:14_cdna 218^607 1 EMBV3_28981 GeneID:497016 11 GENE FCN2 FCNB ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin) EMBV3_09970 ATGCTCTGCGCTGCAAAGGTCAGTGGACCCAAGTGCTGCTCTGGCTGAGAACTTTGTTAA Gene BVT0102_278285 + 0 NULL GK000029.2:370116-590291 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164325 TCONS_00164327 TCONS_00164331 TCONS_00164330 TCONS_00164324 TCONS_00164332 TCONS_00164329 1 XLOC_100203 Coding TCONS_00164325 XLOC_100203 Coding Coding PANX1 29:586222-644607 j TSS122992 5705 1 TCONS_00164325_2 400 0.0399649430324277 5 0.90237051246917 0.000224867415681521 0.00162433168587857 0.000342257651877772 0.000638222929108009 0.000892611793243223 5.92037086372512e-05 0.000598753774544985 0.000605959849241277 1.94374063265237e-12 5.95663415198106e-05 4.48605188552741e-31 2.59685239312764e-25 0.000136852368083949 0.000145125075159952 2.73267541613634e-08 0.00148607134219662 1.96215208546057e-09 0.000148777150883094 0.00252106267286881 0.00111223352346667 0.000499901947748561 0.000728194000016458 0.000354677352720658 0.000741031614921352 0.00207756500295855 0.000717554588187222 1.27217792588503e-05 2.69922846960584e-30 4.19622706028976e-09 4.59861367994372e-05 NM_001245925.1 PANX1 Bos taurus pannexin 1 (PANX1), mRNA. 0.0 2159 100.00 0.209640666082384 XM_005273862.1 PANX1 PREDICTED: Homo sapiens pannexin 1 (PANX1), transcript variant X1, 0.0 1285 83.25 0.212795793163891 TCONS_00164325_2 sp|Q96RD7|PANX1_HUMAN PANX1_HUMAN Pannexin-1; 0.0 637 83.04 0.9925 1 coding 0 0 1 1 0.0835519652698247 0.673747587344114 -0.0637264814042533 0.279256098684011 CGGCCCAGCCCGGCGCGCCGCAGCTATGGCCATTGCGCACCTTGCCACCGAGTATGTCTTCTCGGACTTCCTGCTGAAGGAGCCCTCGGAGGCCAAGTTTAAGGGGCTGCGGCTGGAGCTGGCCGTGGACAAGATGGTCACGTGCATCGCTGTGGGGCTGCCTCTCCTGCTCGTCTCGCTGGCTTTCGCGCAAGAAATCTCCATTGGTACCCAGATAAGCTGCTTCTCCCCCAGTTCTTTCTCGTGGCGTCAGGCTTCCTTTGTGGACTCTTATTGCTGGGCGGCCGTCCAGCAGAAGGACTCCTTGCAGGGCGATTCTGGAAACCTTCCATTGTGTCTGCATAAGTTTTTCCCCTACATCCTGCTGCTGGTGGCCATCCTGCTGTACCTGCCCTCCCTGTTCTGGCGTTTCGCAGCTGCTCCTCACGTGTGCTCGGATTTGAAGTTTATCATGGAAGAACTCGACAAAGTTTACAACCGCGCAATTAAAGCCGCAAAGAGCATGCATGACCTTGACTTGAGAGACGGTGCCTGCCCAGCGCCAGAAGTTAATGAGAACATGAGGCAAAGTTCACAGGAAAGCCACTTCAGGTACCCAATTGTGGAACAGTACTTAAGGACAAAGAAAGCCTCCAGACATTTAATCGTCAAGTACATGAGCTGCCGGGTGTTGTCACTCAGCACGATACTGTTAGCCAGCCTCTACCTGGGCTATTACCTGAGCCTTTCCTCCCTCTCGGATGAGTTCGTCTGCAGCATCAAATCTGGCATCCTGAAAAATGACAGCACCGTCCCTGATAAGTTCCAGTGCAAGCTCATTGCTGTTGGTATCTTCCGGCTGCTCAGTTTCATCAACCTCGTGGTGTATGTTATGCTGGTTCCGGTGGTGGTCTACTCCCTGTTTGTTCCCTTCCAGCAGAAGATGGATGTTCTCAAAGTGTATGAAATCCTGCCCACGTTCGACATTCTGCATTTGAAGTTGGAAGGGTACAATGACTTGAGCCTCTACGTTCTTTTCTTGGAGGAGAATATCAGTGAACTCAAGTCATACAAATGCCTTAAGGTCCTGGAGAATATTAAAAGCAGTTGTCAGGACGTTGACCCCATGCTGCTCCTGACCAACTTCGGCATGATCAAGATGGACATGGTTGACGGCAAAAATCCCGAGCCTGTGGAAATGATGGTGGAGGAGCTGGGAGACCAGACGACAGAGCTGCAAGATCGGTGACTTCAACCTGGGATTCGTTTTGGCTGCAGCACCTCTAGCAGGCACCCAGCTGACTGGCAGTAAATGGTTCTCAGCAGAGGTACTGAGCATGTCTTACTGAGGCTCTGGTGGAAACGATGGTCAACAAACATTGTGGAGGGTGGTTCATGAACTTCCTACGAGACAACGCGGAAACAAGTAAGCCTCTGCAAATGTCGATGCGAGCATCCTCATCAGATGGAAAGTGGTAAGGCTAATCTCAGGAAGAGGAGTAGCGCTTTAGCGCCACAAACAAAACGCCTTTCTGTGCGGATGGTGCAAAGAGCCTCTGAACTACAGAGAACAAGGACTGGGGGAGCTTTTTGTTTTGTTTTATGGGGTGATAATATCAGGGTATAATTAAATATGAATCTTGTCTATGTCCCAATGACTGTTGGAGGAGAAAACATTCACTGGCTGACTCTGGACCCATGGGGGCCTCTTCCTGGCGGTGCCCCAGGCTGGGAGAACCGCTGGCGCTTCTGTCCTAATAACCAGGCTCTGGGCCCTGCCACCTGTCACCCTTGGTCAGCCTAGACCCTCTAAGCACCATGTGATGCTCTGCGCTGCAAAGGTCAGTGGACCCAAGTGCTGCTCTGGCTGAGAACTTTGTTAATAAGGTAGAGTTGAAAGGATGTTTAACTGTTGACTTCATACAGGAAGGAATGCTTCTAAATGAACCCAGTGGGGGAAAACGAACATACAAAACAAGTTAAAGTGACTACTTCAGAAGAGGTTGTCTGCAGGGCGTTCCTCTGTTATCAAAAGCATTTGAGACAGGATGCTACTGAGGCAAATTCACAGAACACAGAAGGCTTAAAGTGAGGGACATTTCTTGCCTATTAGGATCAGAATGTGTAAATGACGTTTGTCATGTGCACACTGACATATGCTCAGACCCAGAACAATTTCGCAGTGTATTTATATTTAAAACCATCTTTGAAAATTTTCTTTAATTTTAGAATTGTATGATATCAGAATTGAGGCCATTTGGGAAGAACATTCTAGCATTAATGCAGAATTATAGAATAAATGTTACAAATTGTATATTGGGTATCAACCAAGCATTATTTCGTAAACATTCAAGGCTGACTGGGAATATCAAAAACCTTTTCCCAATTCCAGTCATGTAAATAGATCCCAACTATGTTTACATTTTATACAAAATTCTTAAAAAGGACATCTGTGGACATTGCTGTTTTTATTCTTGGAAGTTAAAATTAGTACATTGCTACTGAATAATCCTCAGGAGCCTCCAAGTTTATGTGTGGCTCTTAGGGACATTTGTTTATCTGATCTAATTACATAAGCTGCTCTCTGCCTTTCAGAATATTCGCAGAAGTGGATTTTATTTGTGTTTCTGCGATGGTTTCTGAGATGGAAAGCTAATAATAAATATCCAGGATGCAATCAGTGTTTTAAATTATTCTTACTGCATAATATTTATTACCCTTGAATAATAGTGTGGCTTAGAAATGTCAGTAATCTAACTCATCAGTTTTGCTACTTTTTATATCACTGTATCAGGTGTTTTATTGTAGTTCTCTCCACCTGTTTCTTTGTGTAATTTGAAAATTTTCTGAAATATAGTTTTCTATGACTTGATTTTTTCCCCCAAAGCCTCAGATTCTTTATAGGCTGCCCCTAATTTATAGTTTGAAGTGGATACGTTATTATAGGAGATCAGGAACTCTCTCGGCCCCTTATCCCCCCATCCCTACTCTCTGAGTTCCAATAGCATCTGTGATGTCCCAGAGGTCAGCTAGTGACTGGCTGCGTGGATGTGAATAAGGCTGGTGCCCACCTTTGAGGAATTCAGAGACTAGTAAAAGGCAGTGAGGACAGAGGCAGGTACCAAGAGGAAGAGTAATAACCACAATGAAGGTCCTTCCAGAGAACTGCCAGCAAATGCTGTGTTCTTGGGGAACACAATACTATTTTTCTCTTTCCCATCATTTCTAGCTGATAGTTTTGAGAGTATAGTTATTGCTTTTCCCGGAAGTTCTTTAGCCATGTATCCCCCAAGCTGAAGCTTGAACAAAACAGTAACATAGACAGTGATTTTGAACACAAAGAACTCCAATCACACTTTGTATCTTACCTTGCAGGACATGGGGAACACAAACCTGGAGGTACGTGATGCTGTCCGTGAACAAGCATGGTGATAAGAGGCTAATGGGCACATCTGGCCATACATTTTGACTTGAGGAAAAGCGTTACTAGGAAAGTTAACTTCTCCATCTACTGCTGGCTTAGGTGAGGACCACCTTTGAGCAGATTCCCAAGAATGAGGAATCGATCATTGCTTTACAAAAGGGGGCAAACAGATCCTAAATGGCAGCTAACTTTGTTCCGGCTGGTGTCTTCCTAATAAACCACCACACGTCCTCTAACCCAGGCTTGTAGCGCCAGTGTTGTGTCTGTGGTCTGACCGACGGTTCTCACAGCAGTGTCTGGCTCCTCCTTTAATTTCACCAAATGACAGGCAGACACATTCTTAAGACAGAGGCTCTTAAACTTTTAGGAAATTACAAACCCTCTTGTAAATATATTTTCTAAAGCTAGGGACCCTCTCCTCAGACACACACACAACACTAAATACCCGTCAGGGGTCTTCGTGGTCCATACACCCCAGGTTAAGAAGCTGGGCTCTAATGGTTGGGGACCAAGCCACGTGGCAGGGAGATTCCCGTAGCCCTTGTGGAAAGTTGCCGCTCCCAACAGTAAGTCTCAGCTGCTGTTTACTGATTAGAGTTTACACACTTAGAATGAGCTGTCCCCTTGAGTAACTGACATCGTTTCCTCAAGTCAGACTGAAAGAGTCCGTTAAGGGAGCAGGGGGTGGGCAGTGGCACAGCCTGATCAGGGGTCCGCGCGGACTGCGTCCTCTCAGCCTCCAGATCGCGGCATTGTCCCCTGGGGCCAGCCTTGCTGGGCTGGGGGAGGGTGGGCACACCTCTGACCCGCACGATGCTTTGTCCTACTTCGTAAGTGTCCTGGGAGAAATGGAGAAATGTGCCACATTGTGTGGCAGGTCCTGTTTGGTGTGTGTGTTTCTTTTGTGGAAGCTTGCTGTTCTGAGCACCCTCTCCTTTGCAAGGATGAGCTAAGCTGGGACAGTGGCAGGGTACTGCAGGCACTGACCCTGTGAGAACTGTTCAACTCTTAGAGCTGGATTGTTGCACAGCTTTTAAAATGCACGCATGTTGGTTTCTTTTGCTTCTTTCATTTTAAACCCATTGCCGTATCACAAATTCCAGGAGAACAGTGACTGGCTTGGACTAGGCATTCTGTAAATACTTGAACAGAAGAACACACCGTTATAATAAATCCTAGTTTGTGGACAACTGTAATTTGATTTTCAAAGGCAAATGGTCCTCTGCAGGTCAGGGGAGGGGAGGCTTATTTAGCCTCTTGCTGGAGAAAGGACCTGTTCTGCAAATGGATAGATTTCTGCATGTAAGTAGTGCCAGTTCTTAGCTTTTTATTTTGGAGTGAATTGCGATCCTTTCCATGTTCAATACAAGTTTTCAGTGTTGCCTCCCAGAGATCAGGGCAATTTTAGTTATAAAGGTCTCTGTAATTTCCCAGAATAATTTGAAAAGGGATGTTGACTGAAATGTGCAATTCTGAGTAATTTCATCTGAGGGTACTAGGATGAAATGGCTCCTCCTGGGCAGTCATTGGCGTTTTTGTCCTGTTTTTCACAAGTAAAGTAAAACCTTTGAAAAAGTTTGGCAAAGATGACATTGTGTTGTTTATGGAATATAATACACGCTCATCCGTGATTGGTTTGTCCTGCCTGCTTTAGATGAAATGTATTGTCTTTGGGGGTTCTCTTTTTTGCTGTAATAATACTTGTCTCTTAAAGCACGTCATTGTTCCTGAAAGTTGTAAAAGTTTCTCATGCCTTGAATACTTTCTCTGTGCCTCATCAGAAGAGGAAAAAAGAATTCTGCAGTGTGCCAAGGGTTTTCTACAAAAACTGAAGCCATCAGCTCCTCTTTAACAAGTTGACTTTTTTAAAAGCACAGTAATGACAGTTTAATGGTATTCCATAAAGTGGTGCTCTAGGCAAAAATTACATTCTTTTTAATGACTACATTTCTTCAAACCTTTTAAAGAAAAATAGTATTTGTTTTTTTTCTTTCTGTGTCATTTGGTAAGAATGATTTGGTTTCTATTCCACAGAGATTGAAGGATGGGAACAAATTAGTCTTAGAAAATGTTAAAAACCAAGAGCCTCAAAATTTCTGTATTTGGGTGATTATCACCATTCTATTTCATATTTCTACATAAGTCACCTGTCCACGCCCTGCTTTCTGACCATGCTGATATTTAAGGAGAGTTGAAAGGCTGAACACCAAGGCTGCTGTGTCTGTATGTAAAAGTGAAATGGTGTTTCTGTTCTGCACTGTTGTGTCTACCTTAAATAAAACTTTGTTTCTAATGAAAAATG EMBV3_21553 GCCTGCTTCAGCCATAAATGTGCTATGCCATAACCTCGACTAGGAAACCTTCAGTTCTTC Gene BVV0102_428383 + 1 EMBV3_38973 GK000029.2:41400060-41454919 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01885 CGCTCAACGCTTTGCAGAGATACACCAGCAATTCTAGCTCATCCAGGGCACCAGACTCTT Gene GeneID:540480|LOC540480:XM_002691009:333_cdna Constitutive 0 NULL GeneID:540480 10 GENE LOC540480 NULL similar to hypohtetical protein EMBV3_40952 GAGAGCACCTCCTCTAGGTGTTAGCTATGTGGGGGAGAAAGCAGCTACATTTTGAGATGG Gene BVT0102_148305 + 0 NULL GK000001.2:118207263-118300503 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004989 1 XLOC_001155 NonCoding TCONS_00004989 XLOC_001155 NonCoding NonCoding - 1:118229706-118233515 - TSS2473 3173 10 TCONS_00004989_7 60 0.875827292782855 2 0.167279411764706 0.000424864366066627 0.000274988883196001 0.000559824018419354 0.000109919420931275 0.00011493524146444 6.53858414638111e-05 0.000177205867847826 0.000139494803766046 0.000375483604557027 1.29671684636255e-06 2.95797567061443e-05 0 1.74827639727793e-05 1.63074183734401e-05 4.89640409797849e-06 1.94583860437193e-06 0 0 0.000281182519560102 0.000285950175294113 6.02744721813996e-05 0 0 0 0.000408105821186325 0.000542233029388789 0.000321908323228319 0 1.52997232062536e-06 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 8e-116 423 93.55 0.0876142451938229 0 noncoding 0 0 0 0 0.0069173410206753 0.954033720428286 0.00755852078127472 0.898823211316008 GTGACTTGGAGGGTGAAGGTCAAGCAGCCGCCATATTGCAGCCCATGCAAGTGGTCATTATCTGCTGGTTCACCTCATTGGCAAGAGGCTGCAGCTGGGTCTGCTTTAGCTCTTCTGACTCCCAAGCAGGGAGATGGGTTCACCTCCATGGAGAACGGCCCTGGCTTCTGCAGGACACCACTATCAGAAGCAACAAGAGCTGATGTTTCAGTCTGCCTTTGTGGGTCCCAGCTTGTTCTTGGTCTCTCCAACTCTGTATCCAGCTTCCCTTCCTGATTTCCTGTCCAGCATCAGTTGAACCCTGACTGATGTTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCTGACTCTGTGCGACCCCATGGACTTCAGCGCACCAGGCTTCTCCGTCCATGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCTTAGCAACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGGTTTTCTGGGCAACAGTACTGGAGTGGGGTGCCATTGCCTTCTCCCCTGACTGATGTAGTAGGTTATAAAAATGAATTAAAACCAATATGCCATTTTAAAAAATTTGCAATAAGGCAATGCAATTTGTGGCTCACATTGTAAGTTATTTTATTGTTGAAGCCAGTATGTAGTTGGATAAGGCAGTATTTCCCCTGAGCGTGGGAGCACAGAGAAACCCTGGTGTTCTGTCTTGGAGAATAATTATAGTGGAAGTTAGCATAAGAATCTGAAAAAACTTAATTTTTTTGACACCCTAAACAAACTTTTTCAATTTATTTTGTAAAAGAAGAAGGTAAATAACACTAAATACTAATTGGTCCAACAGCCAGTCATTTTATTTTTTTAAATAAGAGATTTATAATAGTAAACATTTTATAAAATGAAATAAATGAAATTTTACTCTAAAATAAATGTTTCATGATATGTAATAAAATATGTTTTAAGTAGACTGTTAACAATACACACTGAATCTCAGAAAATGTTACCTATATGTTCATTCCATTGTATCTTGAAAGTGAATGTCACTCAGTCGTGTCCGACTCTTTTCGACCCCATGGACTAGTTCATGGAATTCTCCAGGCCAGAATACTGGAGTGGGTAGCCTTTCCCTTCTCCAGGGGATCTTCCCAATCCAGGGATTGAACCCAGGCCTCCCTCATTGCAGGCAGATTCTTTACCAGCTGAGCCACCAGCAAATCTGAAAAATATTCTTATTACATTTAAAAGACTCAGCATCACTAATCTTTACTGTTTTGGCTGCTCAAAGTTGCTTTTCTTTCCAGCTAATGACAAGTTTTAGGCATGAGTATTGAGAACAGCAGGAAATACTTGCTTGTGTTTAAATAAATGAAAAGAAATTATTTTTTAGTACTAAGGGTTTCTGATGCTCTCTTTGCTGTCATGAAAATCTCCCTTGGATGATTCATCCTTTGAAAATGGGTTGAAAAATATGGACAAGCGATATAAACTAACAGTTCACAGAAGAATCGCAAATTGCTTCCATTCATAAGGAAAAATGTTTAGGTATAAGAGAAATGCAAAGTGCACCAAGAGAAACAGAACTCATGGAGATGTGAGGAGCAGAGACCTGGGAGTGTTGGGTGAATAGGTGATGGAGACTGATGGATGAGATTCTGAGTCGGAGATTCAGGGAAGAGGAAGGAACACTGACCCTCAAGTGACAGCAATATGTAAAGAGAACACCTCCTCTAGGTGTTAGCTATGTGGGGGAGAAAGCAGCTACATTTTGAGATGGCGGAAGATAAAACTCAGGACAGAAAAATAAAAATGAAAACCAAACTGCCAAGATGCAAAATTGACCAAAAAATTTTAAGAGTTTGACAATTCTGTTGATAAAACCATGGGAACAGAAATTCTTTTATATTGCTGGGGGGAATGTAAAATGGTACAACCCCTATGAAGGGAATTTGACAAAATCTGGCAATATTACATATACACTTACACTATCCCAGAAAACCATTTCAAAGATTGACTGGCAAAAATACAAAATGATAAACGTACAAAGACTCATCTCATTGTAGCACCAGACTCTGAGTGCAAATGGGAAGAATGAAAAAGCCAACAAATAAAGGGAAAGTTGAATAACTATGGTAGACACACAATGGAATACTAGATAGCGATAAAAAGGAAGGGAGTTCTATAGGACAAACAGCTCATTTCTTTCAATAAGTGTCAGGAATAAAAAAAGGAGAAATGGAAGCTGTTACAGGTTAAAATAGATTGGATGTGGTCTAATGTGATGAATTTTGTTTGAATCCTAATTTCAACAAATCAACTGGAAAAAAGTCATTTTTAAGATAATTAGGAAAATTTCAAACATGGCATAGGTATTAAAGGATCATTTTTGTTAGATGTGATGATGACATTGTGGTTATACTTAGGGAGAGGTATCAAAAGATGTATCTGCTGAGACATGTACAGAAATAGCTATCAGTAATGTGATCTGTATAGTGTTTGCTTTAAAATATTCCTTCCCCACTATTAATAAAATGTTTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTAGGGAAATACATGAAACAAGGGTGGAAAGATGCTGATTATTGTTGAAGCTGGATGATGGGTACTTGGCTTATCACACTATTCTATTTTTGTACATGTTTAGAAATTTCCATAGTAAGTTAACTATTTTCAAATTCAAGAAAAGAGAGTGTTGCTGCTGCTGCTGCTAAGTCACTTCAGTCCTGTCCGACTCTGTGCAACCCCATAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGATTCTCCAGACAAGAACACTGGAGTGGGTTGCCATCTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCTTGTCCGACCCTTCGAAACCCTATGGACCGCAGCCCGTCCGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTGTATGTATGTATCACATCTTCTTTATCCATTTCTCTGTCAAGGACATTTAGGTTGCTTCGATGTCTTGGCTATTGTAAACAGAATACACTCTTTTTATATCTTCAAAGATTTTTATACTCTGGGGAAC TCONS_00001915 TCONS_00001916 TCONS_00001917 TCONS_00001918 r 5' 67710 TCONS_00001915 TCONS_00001916 TCONS_00001917 TCONS_00001918 r 5' 66777 EMBV3_04916 CTGCAGCTGGCCGTGAGCAGGAAAACGGAGCTGGAAGAGTATCAAAGGACAAATCGAACT Gene GeneID:100295209|GRIN3A:XM_002689873:17_cdna Constitutive 0 NULL GeneID:100295209 8 GENE GRIN3A NULL glutamate receptor, ionotropic, N-methyl-D-aspartate 3A EMBV3_01665 CGGTACCTGAAGTTGCTGAAGTCGCCATGGGAGCAGAAGATGTCAAGCACTGCCTCATAA Gene GeneID:507082|RALGAPA2:NM_001110439:22_cdna Constitutive 0 NULL GeneID:507082 13 GENE RALGAPA2 MGC137135 Ral GTPase activating protein, alpha subunit 2 (catalytic) EMBV3_15437 TGCCCTTTCAATGCAACTTTTCATATTTAGTTTATTTTGTTAGCGTGATTTTAGCTCTGT Gene GeneID:532401|ZNF281:XM_002694236:180_cdna Constitutive 1 NULL GeneID:532401 16 GENE ZNF281 NULL zinc finger protein 281 EMBV3_18086 CATGTTCAGTAGGACCAGGCGGGCGTCATGGGAGCGTGTGACAATAACTTCATTGAGCTT Gene BVT0102_153188 + 0 NULL GK000018.2:35547612-35576306 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086104 TCONS_00086102 TCONS_00082961 TCONS_00086105 2 XLOC_052040 XLOC_051151 Coding TCONS_00086105 XLOC_052040 Coding Coding SLC12A4 18:35547821-35569646 = TSS64132 3781 1 TCONS_00086105_5 1086 24 0.827850073313783 0.00097508282414392 6.36768264295692e-05 0.000193255595167025 0.000155850235293362 0.000228460682755665 7.53108355512819e-06 1.3820453547516e-05 4.21757989063648e-05 8.3353534674273e-05 0.000270919320585143 4.05586056503207e-05 3.49538693825133e-05 0 0 0.000158751457115599 0.0112034938001239 0.0054575846029368 0.0101194186216454 0.000261668778061229 0.000102633259108215 0.000359683957493319 0.00830030576545845 0.00360049510379197 0.00553033036188779 0.000109874608995928 0.000158312927638147 8.82682187861514e-05 0.000979822189170274 0.000419263824898674 0.00291607956317304 NM_001174091.1 SLC12A4 Bos taurus solute carrier family 12 (potassium/chloride transporters), member 4 (SLC12A4), mRNA. 0.0 6814 99.97 0.999735519703782 NM_005072.4 SLC12A4 Homo sapiens solute carrier family 12 (potassium/chloride transporter), member 4 (SLC12A4), transcript variant 1, mRNA. 0.0 4973 89.01 0.999471039407564 TCONS_00086105_5 sp|Q9JIS8|S12A4_MOUSE S12A4_MOUSE Solute carrier family 12 member 4; 0.0 2185 96.78 0.999079189686924 3 coding 0 0 0 0 0.0729810085851289 0.50815695246866 0.000388410273002432 0.994482780717839 AGGCGGCCGGGGCGGCGGGCGCGGCGGGGCCGAGCGCGCGGGATGCCTCACTTCACCGTGGTGCCGGTAGACGGGCCGCGGCGCGGCGATTATGACAACCTCGAGGGTCTGAGTTGGGTGGACTACGGGGAGCGCGCCGATCGGGAGGACGCGGACGGACATGGCAACCATAAAGAGAGCAGCCCTTTCCTTTGTCCCATGGAGGCTTCCAGAGGAAGTGACTACCATGACAGGAACCTGGCACTGTTTGAGGAAGAGCTGGACATCCGCCCAAAGGTGTCATCTCTTCTGGGCAAGCTCGTCAGCTACACCAACCTCACACAGGGCGCCAAGGAGCATGAGGAGGCTGAGAGTGGAGAGGGTGCCCGTCGGAGAGCAGCCAAGGCACCCAGCATGGGCACCCTCATGGGGGTGTACCTGCCCTGCCTGCAGAACATCTTTGGGGTTATCCTATTCCTGCGGCTGACCTGGATGGTGGGCACAGCCGGCGTGCTGCAGGCCCTCCTCATTGTGCTCATCTGCTGCTGCTGTACCTTGCTGACGGCCATCTCCATGAGCGCCATCGCCACCAATGGCGTGGTTCCAGCTGGGGGCTCCTATTTCATGATCTCCCGCTCGCTGGGGCCAGAATTTGGAGGTGCCGTGGGCCTGTGCTTCTACCTGGGAACAACATTTGCGGCAGCCATGTACATCCTAGGGGCCATTGAGATCCTGCTGACCTACATCGCCCCTCCAGCCGCCATTTTTTACCCAATAGGCACTCATGACACATCGAGTGCCACCTTGAACAATATGCGGGTATATGGAACCATTTTTCTGACCTTCATGACCCTAGTGGTATTCGTTGGTGTCAAGTATGTGAACAAATTTGCCTCGCTCTTCCTGGCCTGTGTGATCATCTCCATCCTCTCCATCTATGCTGGAGGCATCAAGTCTATTTTTGACCCTCCTGTTTTTCCAGTATGTATGCTGGGCAACAGGACACTGTCCCGGGACCAGTTTGATGTCTGCGCCAAGACGGCTGTGGTGGACAACGAGACAGTGGCCACCCAGCTCTGGAGCCTCTTCTGCCATGGCCCCAACCTCACGGCTGAGTCCTGCGACCCCTACTTCCTGCTCAACAATGTGACCGAGATCCCGGGCATCCCTGGTGCAGCTGCCGGCGTGCTCCAGGAAAACCTATGGAGCGCCTACCTGGAGAAGGGTGAGGTCGTGGAGAAGCACGGGCTGCCCTCCACGGACGCCCTTGGCTTGAAGGAGAGCCTGCCCCTGTACGTGGTGGCTGACATCGCCACATCCTTCACTGTGCTGGTTGGCATCTTCTTCCCCTCAGTAACAGGCATCATGGCTGGCTCCAACCGCTCTGGGGACCTCCGAGACGCGCAGAAGTCCATCCCAGTGGGGACCATTCTGGCCATTGTTACCACTTCCCTTGTCTACTTCAGCAGTGTGGTTCTCTTCGGCGCTTGCATCGAGGGTGTGGTCCTCCGGGACAAGTATGGCGACGGTGTCAGCAGAAACCTGGTGGTGGGCACGTTAGCCTGGCCTTCGCCCTGGGTCATCGTCATCGGCTCCTTCTTCTCCACCTGCGGTGCTGGCCTGCAGAGCCTCACTGGGGCACCACGCCTGTTGCAGGCCATTGCCAAGGACAACATCATCCCTTTCCTCCGGGTTTTCGGCCATGGCAAGGCAAATGGCGAACCGACGTGGGCCCTCCTCCTGACGGCGCTCATCGCCGAGCTGGGCATCCTCATCGCCTCGCTGGACATGGTGGCCCCCATTCTATCCATGTTCTTCCTGATGTGCTACCTGTTTGTGAACCTGGCCTGTGCTGTGCAGACACTCCTGAGGACCCCCAACTGGCGGCCTCGGTTCAAGTACTATCACTGGGCGCTGTCCTTCCTGGGCATGAGCCTCTGCTTGGCCTTGATGTTTGTCTCCTCCTGGTACTATGCCCTGGTTGCCATGCTCATCGCTGGCATGATCTACAAGTACATTGAGTACCAAGGGGCTGAGAAGGAATGGGGTGATGGGATCCGAGGCCTGTCCCTGAGTGCCGCCCGCTATGCCCTGTTGCGGCTAGAGGAGGGCCCTCCTCACACCAAGAACTGGCGGCCTCAGCTACTGGTGTTGCTGAAGTTAGATGAGGACCTTCACGTGAAGTACCCGCGGCTCCTCACTTTCGCCTCCCAGCTTAAAGCTGGCAAGGGCCTGACCATCGTCGGTTCTGTCATCCAGGGCAGCTTCTTGGAGAGCTACGGCGAGGCCCAGGCCGCTGAGCAGACAATCAAGAACATGATGGAGATTGAGAAGGTGAAGGGCTTCTGCCAGGTAGTGGTGGCCAGCAAGGTGCGGGAGGGGCTGGCCCACCTCATCCAGTCTTGCGGCCTGGGTGGCATGAGGCACAACACCGTGGTGCTGGGCTGGCCCTACGGCTGGCGACAGAGCGAGGACCCACGCGCCTGGAAGACCTTTATTGACACCGTGCGCTGCACCACGGCTGCCCACCTGGCCCTGCTTGTGCCCAAGAACATCGCCTTCTACCCCAGCAACCACGAGCGCTACCTGGAGGGCCACATCGACGTGTGGTGGATTGTCCATGACGGCGGCATGCTCATGCTCCTGCCCTTTCTGCTGCGCCAGCACAAGGTTTGGAGGAAATGCCGGATGCGCATCTTCACGGTGGCCCAGATGGACGACAACAGCATCCAGATGAAGAAGGATCTAGCCATCTTCCTATACCACCTACGTCTAGAGGCAGAGGTGGAGGTGGTGGAGATGCACAACAGCGACATCTCTGCGTATACCTACGAGCGGACACTGATGATGGAGCAGCGCTCCCAGATGCTGCGGCAGATGAGGCTGACCAAGACAGAGCGGGAGCGAGAGGCCCAGCTAGTCAAGGACCGGCACTCAGCCCTGCGGCTGGAGAGCCTGTACTCTGACGAGGAGGATGAGTCTGCAGCTGGGACTGACAAGATCCAGATGACATGGACCAGGGACAAGTACATGGCCACGGAACCCTGGGACCCCAGCCACACGCCTGACAACTTCCGGGAGCTGGTGCATATTAAGCCGGACCAGTCTAATGTGCGGCGTATGCACACGGCCGTGAAGCTCAATGAAGTTATTGTCACACGCTCCCATGACGCCCGCCTGGTCCTACTGAACATGCCCGGCCCACCCAAGAACAGCGAGGGTGATGAGAACTACATGGAGTTCCTGGAGGTGCTGACTGAGGGCCTCGAACGAGTGCTGTTGGTACGTGGCGGTGGCCGTGAAGTCATCACCATCTACTCCTGAGCCCAGTACAGCCTTGTGGCCTAGAGTGAAGGTGTCCAGGGTAACACACAACCCCCCTCCAGCACCCACCTGCCAGCCCCACTTTGCCTGGCCTCACCCTGGACCCAGCTTTACTAGGTCTCCTTGGAGACTGGGCCCAGACCTGGCCATGGAGATGGATCCGAGGTCCCTCGGGACCCTTAGAGGTTCGGGGACTTGCCCGTCCAACACGCCAGGATGCCTGTCCAGACTGGAGAAAACTGGTGGGGGCTGACGTGGGGATTGAAGGCAGCTGGCCCGGGAGCGCTATTTATTGCATATTTATTGTTTGGATGTCACCATCAGAGAGGAGGGGAAGGGTGACGAGGGAGGGATCCGGCCCAGCCCGCCTGCAGGAAGATCTGACTCAGCTCCTGTGGGCGGGGACCCCCACCAAGCCAAGTTGAATGGAACCAGCCAGCTGAAGCCTGACTTTTTTCAATAAAACATTGTGTACTTC EMBV3_43220 GTCTACCGCTTCGCCACCGACAGGAATGACTTCCGGAGGAACTTGATTCTCAATTTGGGA Gene GeneID:505031|TOMM6:NM_001113718:234_cdna Constitutive 0 NULL GeneID:505031 23 GENE TOMM6 MGC133660 OBTP overexpressed breast tumor protein homolog EMBV3_30688 AGTGCCATTGAGGGCATCAAATACATTGCAGAGACCATGAAGTCAGACCAGGAGTCCAAC Gene GeneID:338070|CHRNA1:NM_176664:196_cdna UTR3_Alt 2 NULL GeneID:338070 2 GENE CHRNA1 NULL cholinergic receptor, nicotinic, alpha 1 (muscle) EMBV3_00011 CTCCTGGGAAAAGAGAAGGTTTACAGTGTTTTGCGTATCTCAGCCTCCCACTCTGGAGAC Gene GeneID:100295920|LOC100295920:XM_002690600:54_cdna Constitutive 0 NULL GeneID:100295920 10 GENE LOC100295920 NULL hypothetical protein LOC100295920 EMBV3_08860 GAACTTGGTGGTCATTTCTCCATAGTCCTGGGCCCCATTATTTTAGAACCTAGCTGGGCC Gene GeneID:524427|FERMT1:XM_002692369:250_cdna Constitutive 0 NULL GeneID:524427 13 GENE FERMT1 NULL fermitin family homolog 1 (Drosophila) EMBV3_32461 CTCCTTTGATTTCAAGGTGATGCGCGAGTCAGTGTCAGAGCTCAAGACCAGGCCCAAGGA Gene GeneID:540601|DNAH1:XM_002697065:565_cdna Constitutive 1 NULL GeneID:540601 22 GENE DNAH1 NULL dynein, axonemal, heavy chain 1 EMBV3_42728 TGTAGCCCAAGTACCCAAGAATCTGTCCTCCGCAGCATGAGAAGCCACTACAATGAGAAG Gene GeneID:617565|CLEC2D:XM_002687810:90_cdna UTR3_Alt 2 NULL GeneID:617565 5 GENE CLEC2D NULL C-type lectin domain family 2, member D EMBV3_26462 TCACCGGCTGGGGCAAGACCCGGTACAACGGGCGACTCAGGTGGCCCCCTGGTCTGCCAG Variant GeneID:618826|CTRB1:NM_001105454:127_cdna 370^503 1 EMBV3_17642 GeneID:618826 18 GENE CTRB1 MGC159723 chymotrypsinogen B1 EMBV3_37863 CAGAATTAGCCAGAAGGTTTAACCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTAT Gene BVT0102_194255 - 1 EMBV3_30363 GK000018.2:45030914-45036919 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071095 TCONS_00166913 TCONS_00107436 TCONS_00231952 TCONS_00056184 TCONS_00010280 TCONS_00031972 TCONS_00238985 TCONS_00165977 TCONS_00124524 TCONS_00071091 TCONS_00251850 TCONS_00216950 TCONS_00233473 TCONS_00002600 TCONS_00202114 TCONS_00110425 TCONS_00001867 TCONS_00001866 TCONS_00242064 TCONS_00110426 TCONS_00090382 TCONS_00007850 TCONS_00103962 TCONS_00001865 TCONS_00251851 24 XLOC_042868 XLOC_101749 XLOC_063346 XLOC_141440 XLOC_033987 XLOC_005831 XLOC_018217 XLOC_145651 XLOC_100817 XLOC_076070 XLOC_042864 XLOC_154791 XLOC_131385 XLOC_142955 XLOC_000643 XLOC_123759 XLOC_066329 XLOC_000454 XLOC_148728 XLOC_066330 XLOC_055163 XLOC_003410 XLOC_062257 XLOC_154792 Coding TCONS_00107436 XLOC_063346 NonCoding NonCoding - 2:8646385-8656445 - TSS79057 10060 6 TCONS_00107436_11 100 0.793737574552684 1 0 5.33560959916005e-06 6.57215664215544e-06 4.66357045037309e-06 1.80420210843235e-06 5.34632908466218e-06 2.36246741608071e-06 2.65427024416477e-06 3.09673087996972e-06 2.38822090811508e-05 0.0112190749007679 0.00639023059208551 0.00429435393033057 0.000509299160841743 0.0024628645048873 0.000400673656870094 0.00854445062604848 0.0059951691167516 0.00651649035058659 8.70186536865918e-06 2.59740760366197e-06 3.52317553205181e-06 0.00649952531222655 0.0116850827080917 0.00813314475100977 8.18566248504231e-06 7.08187601783374e-06 4.75252536118734e-06 0.00889217969600218 0.00591117696921905 0.0148473456585079 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1265 92.09 0.0870775347912525 1 noncoding 1 1 1 1 1.12603706502141 0.0390027822447545 0.00899590186576138 0.845664037517258 TTCATTTTGATACTTGGCAAAACTAATACAATATTGTAAAGTTTAAAAATAAAATAAAATTTTAAAAAGTTAATAAATAAAATAATGTATCACACAAAATTGTGTAAGTCTATTATAATTTATATAATATCAAGTTGGTTTTATCAACCAACTTTGTAATTTTTTCAGTTATCTTTATCATTTTTATTATCTTCCTGCTAGTCTTTTTTAGTTTGTTTTTAAATTTGGTTATTAATTTCAAACTTCTTGAATTTAAGAACATATATTGTTCTCTAAGAACTGCATTGTACCACTGTATACATTTTGTTATTCAATATAATGCAACTCAATCTTAAATAATTATTTTTATTTTTCCCCTTTAACTGAGAATGTATGTAGAAATATATTCTTTAATTTCCAATAAAAAATAAACTCTGTATAATTAGTTCACTTCTTTTTATTATCTTTGTCAGCAAATAAGTATTAAATATCACTTTTAATTTACTGAGGTTCATTTTGCTAAATTCTACATGTTAAATAGTATAAAATATTTCAAATATACTTGAAAATAATATTTATATCATGTATTCTGATTCCTAGATTCATAATTCTATATGTTAGACATTTCTTTGTACCTCTATACACCTTCTTAAAAGCACTAAAGAAGTTTTTAAATTATGATATTCAATTATCTGTGTTTCTCCACTAATCTTTATATAACTAAAGTTAGATTCAGGGCAGATATTATAAGTACCTATATATTCTCATTATGTAGGATTTATTATTAGTAATCCATTCTTAACTACATGGTAAAATGCAAATAAAAAGAATTTAAGTAGTTTCTGGACTTTAATCTTAAATAACAAGTAATTAACATTTTTATCAAGTACTGATGATTAAAGATAAAATTACACAGTAACCCTCCATATTTTAAACATGTAATTTAATTGTATTAAGGAAAAGAACTACAGATGATGGAAGATGTAAATTGATTTTATTTTTGCACATCTGTTCACATTTCTTTTCAAGTTTAGTCCAGGACAGTCTGTGTATGAATGGCACTGATTAATTCACATGTCCCTGTAAGTAGAAAGATGGATATTAAGGAAGAAAATAAATAATTCTCTGAGTGCTACCATATTCAGATGAAATAATTAAACAATTTCAAAATGCTTCACTTCTCAGTCCTTGTTCCTCAAACATGGGACCCTGACACTGTCAAAAACAGTCCTAAATAGAGGAGACAAATAGAGGAGACAAATTTGAGTCATCCCTCAAATTGTATTTCTCACATCACTACTGAGTTATTGGGCTTTAGTTTATAAGTCAGTTTCTTTAATGTTCAGCTCGTGTGAAACATTTAATCATCGCTTAATAAATTGACAAAAATTTTAAGAAACAGACTTCACAGATGTGTCAATCACTTGGTCACTCTTGGGCTCCCTCTAATCCCACTGCAACTGCATATTTACTCATATTTAGAAGCACAATTCCAATTTATGGAACCCACCCTACAGAAAAAAATTATAGATCTGTTGAAGGCCAAAGAAATATTGGCAGTAACTGATGTCCATAAGCCACTTACTGTCAGTAATGTGTGATGTATACAGGAAATGCATTCCATTCGTGATTAGTTCTGTTAATTGGGGTCAAAACTAGCATAATCTGTTTGAATCTAAAAATAAATTCTTAATATATCATTATGCAAATAAGTCAACACTCTTTTCCAATCTAACCTCTTAATGAAGACTCTAGGAAATTTTACATTTCTTATATGTGACAATTTGAAATGCACTTCATGTTTCTGCCCCTGTCAAACTTTCAGTGGAAGCCTAAAATCAGTTATATGACCATGAGTAATCAGGTGGCCAGAAAAAAAAGTCTTTATACTTCCTGCTTTATTGACTGTGCAAAAGCCTTTGACTGTGTGGATCACAACAAACTGTGGAAAATTCTTAAAGAGATGGGAATGCCAGACCACCTGACTTGCCTCCTGAGAAATCTATATGCAGGTCAAGAAGCAACAGTTAGAACTGGCCACAGAATAACATACTGGTTCCAAATCAGGAAAGGAGTACATCAAGGCTGAATACTGTCATGCTGCTTGTTTAACTTATATGCACAGTACACCATGGGAAATATCAGGCTGGATGAAGCACAGGTGGAATCAAGACTGCTGGGAGAAATATCAATAACCTCAGATACGCAGATGACACCACCTTTATGGTAGAAAATGAAAAAGAACTAAAAGCCTCTTGATGAAGGTGAAACAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACTAAGATCATGGCATCCAGTCTCATCACTTCATGGGAAATAGATGGGGAAACAATGGAAATGGTGACAGACTTTACTTTCTTGGGCTTCAAAAACACTGCAGATGGTGACTGCAGCCTATGACCAATCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCAACCAAGGTCTGTCTAGTCAAAGCTATGATTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACCATAAAGAAAGCTGAGCACTGAAGAATTGATGCATTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATGGAAGGACTGACGCTAAAGCTGAAACTCCAATATTTTGGCCACTTGATTCCAAGAACTAACTCATTTGAAAAGACCCTGATGCTGGGAAATATTGAAGGCAGAAGAAGGAGACAACAGAGGATGAGATGTTTGGATGGCATCACTGACTCGATGGACATGAGTTTGAGCAAGCTTTGGGAGTTGGTGATGGACAAGAAAGCCTGGCGTGCTGCAGTACCTGGGGTTGCAAAGAGATGGACAAGGCTGAGCGACTGAACTGAACTGAACTAATATCTCATGGAGTTGAACAAAGAATAAATAAGAGGCACTTCTTGTATGTGAATTTTGTAAGCAGACGTAATGCAACTAAACTGTTCCATCCAGTATCTCACTGTTTCTCACAGAGGGCACTGTGTGACAGTAGGTTGAACAAGGAGCCTCTCTGATGTTTTTCTGAACCTTATAAGTATTCCATCTGGAGGGTGGAAATGACAGCAGCTAAGGGGAATCTCTCCTTGCTATTCTTTGGAGTTCTGCATTCAAATGGGTATATCTTTCCTTTTCTCCTTTGCTTTTCACTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTCCTCAGACAGCCATTTTGCTTTTTAGCATTTCTTTTCCTTGCGGATGGTCTTGATTCCTGTCTCTTGTACAATGTCATGAACCTCAGTCCATAGTTCATCAGGCAATCTATCAGATCTAGGTCCTTAAATCTATTTCCCACTTCCACTGTATAATCATTAGGGATTTGATTTAGATCATAGATGAATGGCCTAGTGGTTTTCCCTACTTTCTTCAATTTAAGTCTGAATATGGGAATAAGGTGTTCATGATCTGAGCCACAGTGAGCTCCCAGTCTTGTTTTTGCTGACTGTATAGAGCTTCTCCATCTTTGGCTGCAAAGAATATAATCAATCTGATTTCGGTGTGGACCATCTAGTGATGTCCATGTGTAGAGTCTTCTCTTGTGTTGTTGAAAGAGGGTGTTTGGTATTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTTTTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAAGTTATATACTCTCCAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTCCCATAATTAACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAAACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGTTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGAGACTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAAAACAAAACAATCAGAATTAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTACAAAGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGACGAAGAGGGGAGCTCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAAGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCAAACTGCAGACTCAGGATTTTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGAGCCACAAGCTCTGCTAACAGAGCACTGGTTCCCTAGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCTGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCTGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCCTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGTTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCTGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTTAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTTGATGCCTTGTAACCACAATCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAGATCTCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGAGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGAAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTATAAAGGAACTACAGCCTCATTTATTATTCGTAATTCCTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATATGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTCCATCAGCCCATACTCTAGTATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTCATGAAAACAGAGGCATGGACCTTGTTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACGATCAGAAACTCGTGTTAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGGCAGTCTCTCTTCCAGTGCGGTCCTTTGCAGACCAGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTATGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCTGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTTGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCATTCATCTCCATAAGCAACCGCTTTCCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCTTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTAATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTATTTCTCCTGGTGGGTGTTTCATAAAGAGACAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTATTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGATTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTTGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTTCCTTGTTCCTGACAGAACCGGTCTAATTGTAGAACAGGATTATACTTAAGAGACCCTCCAACTGGCCAGCGTTCGCCATCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTTTTTAGGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGAAATTGTTAGCTCCCATCTGTAAGAGAGAAAAAAAGTGACCAAGGCCATTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACTGACGCAGGGGCCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTGGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACTACCGGGGGAAACATTCGTCACCTGAGTGCCTGTGCACGGCCCTGAGTATTTCCTGACTACAATAAGACAAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAACCCATCGCAGCCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCAATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGACAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATAAGCTGTATGAGATCACCGTGGAACCGCAGAGCAGGGCCCCTTACTTGCTTCACGCAGGGCATGCCATTCATTCACACAAGCACACGGTAGAGTTAGTAAAGCACGGCAGAAAACGTGTTCGCTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGGATCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAAGTTATATACTCTCCAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTCCCATAATTAACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAAACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCAGTATGACCAGTGTGTTCTCTTGGCAAAACTGTTAGCC TCONS_00101618 TCONS_00101619 . 5' 129907 TCONS_00101618 TCONS_00101619 . 5' 129907 EMBV3_21127 CGGCCCGAGAGAATGAGTGTAGAGTGGTATGGGGTCTGTTTTGCTCTTCCCCAAGTTTGT Gene GeneID:511225|CCDC137:NM_001075501:75_cdna Constitutive 0 NULL GeneID:511225 19 GENE CCDC137 MGC139366 coiled-coil domain containing 137 EMBV3_07685 CGCTTCACAGATCGAAGGTGATTCAGGAGACATGAGGACTAAATGCAACATCCGAGCCTG Gene BVV0102_344708 + 0 NULL GK000007.2:4062832-4097532 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218634 1 XLOC_131954 NonCoding TCONS_00218634 XLOC_131954 NonCoding NonCoding - 7:4073876-4075031 - TSS162632 1155 1 TCONS_00218634_2 140 0.987878787878788 1 0 0.000382843070841078 0 0.000328496158770604 7.18973945208842e-06 0.000968200086984646 4.33582356835951e-05 0 0 0 0 0 0 0 0 0 0 0 1.08618827073752e-05 0.00028870036339652 6.84898811397277e-05 2.62833412920237e-06 0 0 0 0.000137969632196418 0.000372097365908145 2.02913617687495e-05 0 0 0 XM_005216968.1 EXOSC10 PREDICTED: Bos taurus exosome component 10 (EXOSC10), transcript 2e-41 174 80.48 0.176623376623377 NM_004874.3 BAG4 Homo sapiens BCL2-associated athanogene 4 (BAG4), transcript 4e-06 57.2 77.63 0.0649350649350649 0 noncoding 0 0 0 0 0.0154068083929374 0.925891570566422 -0.0253375842462351 0.659371517401927 CTTTCAGTCTCTGCCAAATGCAGTGGTGGCAGCTGACCCCTGTCTCTAGCAAGCCTCTGCTGTTTTCACTGAAGTGGCCTTCGTTTATTTCTACAGGTAATTGCATGAAGAGAGGAGAAGAGACAGCTCTTCCTTATGGCAGAATTTCAACTAATGAACGTATGAGGAATGATGGACACAGAAAATCACCAACAGACAAATGTCAGTGTTCACTATTGCTGCCAAAAACTGCGAATGGGACTTCCTTGGCGGTCTGGGGTTTAAGAATCTGCTTGCCGATGCAGGGGACACAGTTCAATCCCTGCTGCTGGAAGGTTCCACATGCTGCGGGGCAACTGGGCCCATGTGCCACAACTGCTGAAGCCCGAATGCCTCAGAGCCTGTGCTCTGCAACTAGAGAAGCCACTGCAATGAGAAGCCTGCCCAGCATGAGAGAGTAGCCTCCCGCTTGCTGCAACCAGAGAAGCCCACACTCAGCAGTGAAGACCCAGCACAGCCAAAAACAAACAGATAATTCATTACCCTAGAGAAATTTTACAAAAAAGAACTACAGGTGGACCGACACTAAAGGGAGAGAGTGAAAATACAATGAGAAGGGGGATATCTGTGTGGTCTTCAGCATCTCTCCACAAGACACTTAATTTCTCTGGGCAGAGCAAGCTGGCAGACCCCATCTTGACCAAGCGATCAAGGTCAGCCACAGAGGACAGGACACAGCGACAGCTCGCACGCTGGATGTAACACAACGGGAAGGACACAGCGTCACTTGTGGGGTTTCTGCCAAAGACGCACAACCCCTGATCTGATCCCGAGGAAACATCTGACAAGCCACACTGAGGCACACTCTGCAAACAGCTGAGTGGTTCTCAGAGCGAAGGTCACGGACAACAAGGGAAGGCTGCGGAACCATCGCTTCACAGATCGAAGGTGATTCAGGAGACATGAGGACTAAATGCAACATCCGAGCCTGGACCAGAAAAAGAACCCAAGGGGGAAAGCTGATAACGTGAGGTTCCGGTCTGGAGACGAGACCCTAGTGTCGTGCCGATGTTTAGTTTCCGGCTCAGACAACCGCACCGTGTGTGAGACACTAACCATCGGAGCCGCTGGGTGAAAGGTATCAGGAACTCTCAGCTAGTTTTGTCATTTTCTGTG TCONS_00215117 . 3' 1025 TCONS_00215117 . 3' 2179 EMBV3_05201 AGACAGTGGGAAGATTGTAGAGTATGACAGCCCTGAAGAACTGCTGAAAAACCCTGGCCC Gene GeneID:520925|ABCC2:XM_002698487:557_cdna Constitutive 0 NULL GeneID:520925 26 GENE ABCC2 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 2 EMBV3_31608 CAGGCAGCAGGCTTCCAGCTAAATGAGCAACTTTATCAAATGATTGTCCGCCGATACGCC Gene GeneID:100300424|LOC100300424:XM_002694786:600_cdna Constitutive 0 NULL GeneID:100300424 18 GENE LOC100300424 NULL similar to calpain small subunit 2 EMBV3_35461 GAAGGCTGGAAAACTGAGCAGGAACCAAGTGATGTCAGAGGAACCACTTCAAGGTCACTC Gene BVT0102_010457 + 1 EMBV3_38366 GK000013.2:80612354-81278963 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046560 1 XLOC_026732 NonCoding TCONS_00046560 XLOC_026732 NonCoding NonCoding - 13:80659489-80682328 - TSS33753 2769 1 TCONS_00046560_6 92 0.355001805706031 4 0.878929853752518 0.000764243901360847 8.82425537898693e-05 8.6696806684437e-05 0.000256974674546654 0.000443082941098831 0.000217365751506525 9.86337091069753e-05 0.000120947304365406 0.000136425495777081 0.000291939768167459 0.000274865533838725 4.00174937380204e-05 0 6.53192168117023e-05 0.00144382657154151 1.18082724021747e-23 2.40843889062008e-24 2.6488645447811e-14 0.000150000614894029 0.000425507032656955 0.000310969101251122 1.33553344626952e-05 0.000311337899151594 0.00028913264342832 0.000137874076335932 0.000459955552818507 0.000949827714936963 6.21241574280274e-05 0.000204308598961678 0.000127237315678938 XR_226083.1 LOC101902691 PREDICTED: Bos taurus uncharacterized LOC101902691 (LOC101902691), 0.0 969 100.00 0.193571686529433 0 noncoding GTCGAGCGCCGCGCCTCTGCGCACGGCCCCGGGCTGCGGGGCCGGGGCCGCCATTTTGAGCCAGGAACTCTGGTCTCAGTGGCCGGGTTCAAGGTCTCTGCGTGCAGCAGCCTGTGAGCCAGTGACACCAGAGGAAGCGCAAAGGGATGACAAAAAAGGAAATCAGGAAGTCCCCTCAAAGACAAGAAGGCTGGAAAAATGAGCAGGAACCAAGTGATGTCAGAGGAACCACTTCAAGGTCACTCCAGAGGAATTTTAACTCTTGTTGAGACACTATTCTCCAAGTGCCATGGCCACTGCTGCTGTGGGACATTTCTGCCATTGGGCTCACAACACCGTCCCAGTGCCTTTGCCACCAACCCTCACTGAGGGAGCTGCTTCCATAGCCCAGGGTTTAAGTGCGACAAGGTGAGCTTATCGACAAAGGTGTGGATCCATGGAACACGTGAGGAGATCAAACTCAAAGCCGTGTTGAACTGCAGCTATGACTCTCCGTGGTTACCCACTTGGCTATCTGGAATCCCTGACGCTTTGAGTGGATGTGTGTTTATCACGGCAGGCGCCACAGGCACTGAAGGACGTCTAGCTGCATCCCTGCTCGCTCTCAGTCCACAAAGAGAGAGCACATGTCTCTCCCGGAGCTGCGCAGACCAGGACTGCTCCAGCCATTGCCAAGTGTGCCCTGGGCAGGGGCAAAATCACTGTCAGTTGAACACCACTGTTCTAATCCTTGCTGAATACCCTTGACGCCATCCCAATGGAATCAGAATCTTTGGGCACGGACCCCAGGTGCCAGCATTGGAAAAGCTACCCAGTGCTTTTAAACCGTAGCCCAGGTTGAGAGTTTCCATCCTAAGCAACTGGTCTAATATTGCCATAGAGCTTCTTAAAGTCCTTCTCAAATATTTTTATAATCGGGCCCTCCACTTAGCAACACATGAGCAACTACTATGTAGAAACAATATTAGCTATAATGTCAAGTACCGTCTCATGGAATTTGCAATTTAATGAGGTCATGAGAGTGCGAGGGAAATAAATTGTTTTTCATGTGTGAGTACGTATGGAAAAATACCTAGAAAGAAGACCTAAGAGGAACGAGAGAAATGAGTGCTGATCTGTGGAAGGAGGGCAGGGGAGTTAGTAGACAGGTGGGACCTGGGAAGCTCATCGGGGGTGAAGAGCCACACGACCTCTGAGAGGACAGGAGAGGGTAGGGCATTGTGATGTTTTGCAGAGCCTGGTATATTTTTTAATGAAGAGGGTTATGAAGACTACAGTATATGTTCAGCACTGATCTTTTTTTAAATACCAGCTTGATTATAACACACCATAAAATTCACCATTTCAAAGTGTACAATCCAGTGATTTTTAGTATATACACAGAACTATGCAATTGACACCACCATCAAATTTCAAATGTCTTCATTACCTTAAAAACAAACCCCGTACTCCTTAGTAGTCACTCTCCATTCACTGCAACCACCCCAGCCCCTGGCAACCAATGATCTACTTTCCGTCTCTATAGATTTGGCAATTCTGGACCTTCCATATCAACAGATCCATGTAATATATGGCCACTTGTGTCTAGCTACCTAGACAGCATCTGAAAACAAAGCAAAGCAAAATGAAAGGGAAAACAAAATCTTCCTCCCAAGAGGCAATTTAGCCTAGAGCCCAAGAGATAGGCTTTGGCACCAGACGAAATTTCAAATTAAATCAAGTCCTAACCCTCTAGCTGTTTGATCTCAAGCAGACAGCGTTGGTCGACCACCCAACACCCCTCTCAATGTCCAACTCTCACCATAGAGACTGGAAAGTCTAAGTAGCATTGTCCCAAGTCCTCCAGTTTCGCCAAAAAGGAGACATTGGAAAGTCTCAGATAGCTCCTAGGAAGGATATTTCCTTCCAGGATTAGAGAGAGACGTACCAGAAGAAAACATAGTGTCATTTGTCCTCCTTCCTTCCTTCGAAGGATGTGTGAAGGCAGGAATCTCGGACACATGGCTGCCATATTGTGACCATGAGGGAAAGGCTAAGAAGATCCAGAAATGCCAGCCTAGATCTGATTCTGTTGCTCCAGATCCAGTAGCAGCAACTGTCTTCTCAGTGATTAATTGTGCCTGAAAAATAAGCCCTTGTATGTCTAAGCTTCTGTTACTTGGGTTTTGGTTACTGGGAGTATCAAATTCCTGCAGCAGAAAGTTACTTCACTTCTATGCAGAAGTTCACACACTGGGGCAGAGCTCCCTCACCTGTATCTCGAGAATCCGCTACCATTTGTTGAAAATTGGTTTCCTTTTGGGAGTGTGTCTTCTTTGGGGAAGCTCATGGGATTTGCATCCTGTTCTTTTGCTAAGATATGAGCCTGTTAGTCAACCTACACTCATCAGAAACCCCTCCCTGAAATTTTATTTTTGAGATGGAAAGTTAATCAGAATTCATTCTTCCTAGTGGAAAGCACACTGACTAATGAACCTGTTCCCACCACAGGGCTGATCCTATATTTATCCATGCATACCTTCATCCATTCATTCTAAAAAATTTATTGAGCACCTAATATGTGGCTTCCCTGGTGGCTCAGCTGGTAAAGAACCTACCTGCCAATGCAAGAGATGCAAGAGACATGGGTTTGATCCCTGAATCAGAAAGATCTCCTAAAGGAGGAAATGACAACCCACTCCAGTATTCTTGCCTGGAAAATCCCATGGACAGAGAAGCCTGGCATGCTGCAGTCCCTGGGGTCTCAAAGAGTTGGATAAGACAGAGTAC TCONS_00046557 s 5' 43934 TCONS_00046557 s 5' 46184 EMBV3_21539 AATGGCTGTATCAACTATGAAGCGTTTGTGAGGCATATCCTGTCGGGGTGACGGGCCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33104 TTAGCAGCAACAACAGGCAGGAGCATAACGCCAGCTGGAGGGAATCCAACTGGAATTGCT Gene BVV0102_342770 - 1 EMBV3_27110 GK000002.2:119490382-119524656 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02059 GCAAACCTCCCTCAATGGGGTCTACCAGCCTCCAATTCACTTCCAGAACAGCGAGTTCTA Gene BVT0102_024979 + 0 NULL GK000008.2:71390894-71430472 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228096 TCONS_00228092 TCONS_00228097 TCONS_00228094 TCONS_00228091 TCONS_00228088 TCONS_00228095 TCONS_00228090 TCONS_00228089 TCONS_00228093 1 XLOC_138419 Coding TCONS_00228094 XLOC_138419 Coding Coding ENTPD4 8:71426280-71457127 j TSS170147 2238 1 TCONS_00228094_5 479 10 0.927770213317772 0.00634681387330588 0.00555434575466903 0.00513810400591828 0.0053206176673476 0.00334475479684181 0.000709228395944558 0.0012296516163843 0.00310238015548002 0.00379824184828898 0.00234119306533162 0.000205561979306504 0.000151993343702578 0.000315466861854821 0.00130042857689362 0.00426616586584524 0.0012288067191041 0.00224157298398759 8.01444253383087e-33 0.00197669925464129 0.00491372840417505 0.00236443501135215 4.38937660839367e-17 1.39480038140031e-06 0.000163250418767246 0.00737060299945637 0.00440552368548028 0.00359909138102986 0.00013787020865451 0.000524451614354588 0.000205951140646656 XM_005210277.1 ENTPD4 PREDICTED: Bos taurus ectonucleoside triphosphate diphosphohydrolase 4 (ENTPD4), transcript variant X2, mRNA. 0.0 2931 100.00 0.725647899910634 NM_001128930.2 ENTPD4 Homo sapiens ectonucleoside triphosphate diphosphohydrolase 4 (ENTPD4), transcript variant 2, mRNA. 0.0 1864 89.72 0.621090259159964 TCONS_00228094_5 sp|Q9Y227|ENTP4_HUMAN ENTP4_HUMAN Ectonucleoside triphosphate diphosphohydrolase 4; 0.0 915 94.98 0.937369519832985 1 coding 0 0 0 0 -0.18373569064263 0.131453004411632 -0.156647463278355 0.0332603970913845 CCAGTCACCGCGTACAGGCCCCGCCCCCAGGCGTAAGCCCCGCCCCTCGGCGTGCGCGCTCCCGGCGCTCCCAGTGACGTGACTCGGGTGGCGGAGGAGTGGCGGGCCCGCTACCGGAAAGGAGCGGAGCTCCCGGGAAGCTATCACCACCGGGGAGTCGTGTCGGCTTTGCCGGCACCGCCTCGCCGCGGTGGCCGTGATGCGCTCCACCCGCGAGTCCCCACTCCCGGGAGCCCTGGCCGCCGAGTCGGACGTAGCCGAGCAGAATAGGAGGGCTCTAATGCCAGGAGGACTGCGGTGATGGTGTGTGATAACTGATTCCCAGAGCCTTGCCTGACCTCTGACCCATCAGCATGGGGAGGATTGGCATCTCCTGTCTTTTTCCTGCTTCCTGGCATTTCAGCATCTCTCCAGTGGGGTGTCCCCGAATTCTGAATACCAACTTACGCCAAATTATCGTCATCAGCCTTCTGGCTGCTGCTGTCTCACTTTTATACTTTTCTGTTGTCATAATCCGAAATAAGTATGGACGGCTCTCCAAAGACAAGAAGTTTCAAAGGTACTTGGCACGAGTTACTGACATTGAAGCTACAGACACCAATAACCCCAATGTGAACTATGGCATCGTGGTGGACTGTGGGAGCAGCGGGTCTCGGATATTTGTCTATTGCTGGCCACGGCACAATGGCAATCCTCACGATCTGCTGGATATCCGGCAAATGAGGGATAAAAACCGAAAGCCTGTGGTCATGAAAATAAAACCCGGCATTTCAGAGTTTGCGACTTCTCCAGAGAAAGTCAGTGATTACATTTCTCCACTCTTGAACTTTGCTGCAGAGCATGTTCCACGGGCAAAACACAAAGAGACCCCTCTCTACATTCTCTGCACGGCTGGAATGAGAATCCTCCCCGAAAGTCAGCAGAAAGCCATTCTGGAAGACCTTCTGACTGACATCCCTGTGCACTTTGACTTCCTGTTTTCTGACTCTCATGCAGAAGTAATTTCAGGAAAACAAGAAGGTGTCTATGCTTGGATTGGCATTAATTTTGTCCTTGGACGATTTGAGCATATCGAAGATGATGATGAGGCAGTAGTGGAAGTTAACATCCCTGGTAGTGAAAGCAGCGAAGCCATTCTTCGTAAAAGAACAGCTGGTATTCTAGACATGGGAGGCGTGTCAACCCAGATAGCATACGAAGTACCCAAAACTGAAGAAGTAGCTAAGAACCTGTTGGCTGAATTTAACTTGGGGTGTGACATTCACCAAACGGAGCATGTGTACCGTGTTTATGTGGCCACGTTCCTTGGGTTTGGTGGCAATGCCGCTCGACAGAGGTATGAAGACAGAATATTTGCCAGCACAGTTCAGAAGAACAGACTCCTGGGGAAACAGACCGGACTAACTCCTGACACTCCGTACCTGGACCCCTGCCTACCCCTGGACATCAAAGACGAAATCCAGCAAAACGGACAGACGCTGTACCTGCGGGGGACGGGGGACTTTGACCTGTGCCGGGAGACCATCCAGCCTTTCATGAACAAAACAAACGAGACGCAAACCTCCCTCAATGGGGTCTACCAGCCTCCAATTCACTTCCAGAACAGCGAGTTCTACGGCTTCTCCGAGTTCTACTACTGCACGGAAGATGTGTTACGGATGGGCGGAGACTACGACGCCACAGCATTTACTAGAGCCGCCAAGGTAACTGTCCAGGGAGCTGGTGTAGGCAGTGACAGCCCCAGACTGGAGCAGGACATGGGAGGTGGCAGAAGGCTGTGTGCAGCGCCTTAGCAGCCCTGGCTGGGCCTTGGTTAGGTGAGGGGGACAGTCACAGCAGAAGCCAAAACACCCCCCGTGAGCCAATTTCTGCCCCACTCCATGGACTGCACTGCCATCATGGCTCCCACACGTAATAGTGTAATTCTGGTCCCACAGCTCCTCACAGCTTCCTGCCCTTTGCTGCCAGCACCCCTCTTCTCTTGTTCTCCCTGCCTTCCTGAAAGCCCCCTAGGCTCCAAGCCTGGGCAGTCACCTCCCTTGGTCCTCTGACCTGTAGGTTCTTGGCTGGTCTCATCTGAATTCATGGTTTGCTGCTGCCTCCCAGAAAGAGGCTCCACATGTGACTCCTGCCCAGTGTCTGCTAGCTCTCACAACTCCAAACAACCCCTCCTGTCTCCCCATTCTGTTCTGCTGTGTTGCCTTGATCATGGCATCACAAGCCATCTAGTCCCCCTCC EMBV3_12297 AGTGCCTTCATCTGCCCTGAGTTCCGGCATCTTCTGAATGGCGTGGAGTTTGCAGATTCA Gene GeneID:280762|DDC:NM_173907:2_cdna Constitutive 0 NULL GeneID:280762 4 GENE DDC NULL dopa decarboxylase (aromatic L-amino acid decarboxylase) EMBV3_34749 CATGTGTTACCCTTGTGTGGTTAGGCCGCTCACGGTGGCTAGTCTTTCTCTGTATATCTG Gene BVV0102_228503 + 1 EMBV3_19306 GK000008.2:61929098-61942615 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07726 CAGTTGCATTGTTGGGTGTGTTGTCAGTGTCCGAAATAAAACCATTTTGGTGATACCAGC Gene BVT0102_132041 + 0 NULL GK000012.2:46857133-47767914 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036962 TCONS_00036961 1 XLOC_021266 Coding TCONS_00036962 XLOC_021266 Coding Coding MZT1 12:47766805-47781910 = TSS26778 2058 1 TCONS_00036962_1 80 3 0.863943326271186 0.000126116490951894 0.000136648989219704 5.76363005558178e-05 0.000131742640388574 2.97245563753798e-10 0.00017284929743917 0.000187809535637879 0.000171260379757416 0.000383380928791186 4.55766913028298e-05 5.00411369579916e-05 0.000152889421860406 1.39413917197239e-05 0.000265004013798038 2.73763549306262e-09 0.00192380957986939 0.00398715315571385 0.00262135668692389 6.26746780868228e-05 6.35477644225247e-06 6.04587447047349e-05 0.00186098345071902 0.002251166122258 0.00318447492580037 7.27436133135975e-05 0.000106125093546688 0.000150243200833629 0.000228685738587345 0.000357303672340723 0.00025999781155708 NM_001206331.1 MZT1 Bos taurus mitotic spindle organizing protein 1 (MZT1), mRNA. 0.0 3694 99.81 0.999514091350826 NM_001071775.2 MZT1 Homo sapiens mitotic spindle organizing protein 1 (MZT1), mRNA. 0.0 1314 83.28 0.602040816326531 TCONS_00036962_1 sp|Q8BUR9|MZT1_MOUSE MZT1_MOUSE Mitotic-spindle organizing protein 1; 9e-43 137 92.21 0.95 1 coding 0 0 1 1 0.03038451896111 0.824850742852499 0.0391582315149213 0.405212805603657 GGGTCAGGCCCTTCGCCCGCCTCCCTCGGCCTCCGCCATGGCTAGCAGCAGTGGCGCCGGGTCGGCGGCAGCGGCAGCGAATCTGAATGCGGTGAGGGAGACCATGGACATCCTACTTGAGATTTCAAGAATTTTGAATACTGGATTAGATATGGAAACTCTGTCTATATGTGTGCGGCTTTGTGAACAAGGAATTAACCCAGAAGCTTTATCATCAGTTATTAAGGAACTTCGCAAGGCCACAGAAGCCTTAAAGGCTGCTGAAAATATGACAAGCTGACTTTCTGAAGAAATCCTGATGGGCTGTGTCAAGCTGTGTAAGAAGATTGAAGATTGCGTTGTAGTCAAGAACACACAATGAAATCACTGCATGTAGCAATGTGGAAATATTGTCTTTTTTAAAAGAATTATAAAACCATAGCTTTATAAATCAGTGGAAAGTGGCTTACAGAGAAAACTATCAGTTGTGTTTACATCACATCTTTTTTTTTTTTTCTTTAACTGCTCTAATGCTTTGGCATTGTTGTGTTCATATTTATGTATTCCTAATTTATAGCTCTGATAGCTTTAATTTTCTAAGCAGTCTGTCCATCAGATGTGCACATCTGCTGTGCCTGGGTGAACTATAGTGGAACCCATCAGCAGTAATGTTGTAGTTAAGACTTGTTGACATTTCCATTATAAACTTAAATTTTGAATTGTTTATGCAAAATAACTGTGGATTTATGTTGTATTAGGCTAAAAGTTGACAGAATTTCCGCTACCATGTATGGATTTTTGATTTAGATTCATTATGCATATCAGAATCTTGTTTTTTTATAAGAACATGGAAAATGTGTTGTTAATCTGCTCTTTAACAAAAAATATTTCTTTTTTAAACATAAAGTTTGAGTGGCAGTTAATAGTGTGACCCAGATCATATTAATATTGATTGAAAAGTAAAACTTTCAGAAAACTTAGATTTTAAAGGTAATGACAGTGCTTAGCTTAGTATTATTTGTCATTTGATTCATTTAAATTTAGGGAAGATATTGAGAATGTTTTTCTAAGTTTTTAATTCATAACGAAACAATTCCAACATGAAAAGTCTTTTTACTTTTGTTTAATGAAAATAATTTGAGTGCTTACTTAATAAAATACCTTGAGTGGTTATCTAGTAAACCACCAAACAGGTAGTGACATTCAATAAATAATGTTCCTATTTTCTGAAGGAATAAAGATTTCCAGTCATTAAAGAAAAAATAATCACATTTTCTGCATCAGGAATTCTGAATATGCCTTTCTAAGATCATTTTTGTGTGTCATTATTTTTACCCTGTAAGTTTTAACTAATTGAAGTGATGGTTCAAAATAAAGTTTAGAAAACTTAGGATAATATGGTTTCTGTTCCTAACAGAATCTCCATGAACTATTTTTTCCCAAGACTACTACAAATTGAATCTGATCTTTTAAGATTGTGTTAGCTTTCCAGTTAAATGATAGTACACGCATATACTCTGATAGCATATTTTGTTCTTCAAACAAACTAAAGTGATATTAATAAGGGTTAATAATATTTAATGGCAACCTTCTGTTCTATTTTAAAAATCTAGTCTTTTGACCACGTTGACTTTTGAATGGTGGCATCTTTACCAAGTACACTGAACATCTGTTATAGGGAGAACAGTTTGGGAGACAATAAAGGTTTTGATGATAAGTCATCTATATGATTAAAAAACATTGCAAATACTGCATGTTGTTACTTATATAAAATCAGAAAGAAAACACTCTTGTCAAGCTCCAAAATTTGTATATACTTTTAGGTCATAAGAGTTAATAGTTTTATTTATAACTTTGTAGATTATGTTATTTATGTATGAAACAAAGCAGGAAAATATATTGAGAAGGAGTTCTGTTTACAGAGGACTTTAATGTGTTACATTTCTTAAATGTAAACGTGTATTTTCAATGCATACTTAAGTAACACTTAAGGAAACCAAACAAAGTAATGATACAGTTGCATTGTTGGGTGTGTTGTCAGTGTCCGAAATAAAACCATTTTGGTGATACCAGCCTGTA EMBV3_30943 TCCTCTTTTCCACAGAGGGCTTGACTGAGACCCACACTGAACTTCTAGTTACCTCCCTCT Gene GeneID:533174|SNX25:XM_002698676:174_cdna Constitutive 0 NULL GeneID:533174 27 GENE SNX25 NULL sorting nexin 25 EMBV3_08477 TTGGTTTTATTATGGAAGGATCAAACTCAGGAGGAGCCAGATGGGAGGGGCACAGACAGC Gene BVV0102_302457 + 0 NULL GK000007.2:17114225-17118951 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20265 GGAGAACGGTGAGTGTGCTCAGAAGAAGATCATTGCAGAAAAAACCAAGATCCCTGCGGT Gene GeneID:280838|PAEP:NM_173929:470_cdna Constitutive 0 NULL GeneID:280838 11 GENE PAEP LGB MGC134239 progestagen-associated endometrial protein EMBV3_32380 ACACGATGTTCCGGCGCCAATGCATTGAAATCCTATGACTGCCACTGGAAATGCCGTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24386 TACTGGGACATGTCTGGCCAAGATGTGATCAAGGCTGTGGAGGATGGCTTCCGGCTGCCG Gene GeneID:540439|EPHA10:XM_002686468:513_cdna Constitutive 0 NULL GeneID:540439 3 GENE EPHA10 NULL EPH receptor A10 EMBV3_24038 GAGTCTCTGCTTCTCACTTCCCGCATCTCTACACTTCTGATCTGGAGGCAAACCCGACTC Gene BVV0102_168095 + 0 NULL GK000010.2:43735174-43777878 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14780 AGATGAGTGATGGGAAGAAGGAAGAACTCCAGAAGGCACTCCAGGGTTTGGTGGGGTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25527 TGTCAACCGCAACCTCAAACCTGACCGGAAGGCAAAGCCAACACCACTTGACCTGAGAAA Gene GeneID:529346|GAB2:XM_002699070:96_cdna Constitutive 0 NULL GeneID:529346 29 GENE GAB2 NULL GRB2-associated binding protein 2 EMBV3_31764 GTTTGTGTAAAGGAATCAAAGAAACTGCTTGAGGAGAGGTAGGAGTTGGTGCTCCAAAGT Gene GeneID:533126|FAM115A:NM_001099054:700_cdna Constitutive 2 NULL GeneID:533126 4 GENE FAM115A MGC138042 Protein FAM115A EMBV3_14336 GCAGAAACTTCTCTGGGAGGATCTCCAGCTATTCCTCATGGGAGCCAAAGTGTACTTGGA Gene GeneID:100295703|LOC100295703:XM_002698551:11_cdna Constitutive 0 NULL GeneID:100295703 26 GENE LOC100295703 NULL similar to cubilin EMBV3_15748 AGTGCAAATCTCAGCTGTTGCCTGTGTTGAGCCTACTCTATGTAAGGAGATAGGAGGACA Gene GeneID:514749|RAD51:NM_001046179:154_cdna UTR3_Alt 2 NULL GeneID:514749 10 GENE RAD51 MGC128559 RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) EMBV3_07218 AGCAGGCCATCTTCGCTGTTTTTAAACTGTGCTCTCTTGCGGTACCTTCGTTTGACCGTC Gene GeneID:100336473|LOC100336473:XM_002697064:562_cdna Constitutive 0 NULL GeneID:100336473 22 GENE LOC100336473 NULL CG11807-like EMBV3_29214 AGAGATGAGCTGGGCCTCGAACACACGATCTCTGATGCCAAATTCGTTGCTCAGTAATGA Gene BVV0102_338912 + 0 NULL GK000019.2:34619451-34667120 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096460 1 XLOC_057974 NonCoding TCONS_00096460 XLOC_057974 NonCoding NonCoding - 19:34662778-34666082 - TSS71676 1352 1 TCONS_00096460_2 73 0.517751479289941 3 0.591583409022101 5.36317073619029e-05 2.15994826047603e-10 0.000462477751717358 4.89393710927779e-05 0.000173099213329627 7.22320454176508e-11 5.59266440731942e-05 9.01344636786957e-05 1.51889094795178e-05 0 0 0 7.5980764670596e-11 9.30577991131329e-11 1.15290325361528e-10 0 0 0 0.000659375933486064 0.00104083322504961 0.000174212628527932 0 0 0 0.000367691178661857 0.000476083746479084 0.000210815609852316 0 0 0 XR_138726.2 LOC100847934 PREDICTED: Bos taurus uncharacterized LOC100847934 (LOC100847934), 3e-15 87.8 76.82 0.104289940828402 0 noncoding 0 0 0 0 -0.0870405449722568 0.417708526951949 0.00365711893472874 0.942274484401761 CAGAGCCTGGGACCCACCTGGGGCATTGAGGACATCGAGGGCCCGATTTTATCAGAAGTTCAGAGAAATGACGCGTCTCCATTGAGAAAACTAGTCAGAGATGAGCTGGGCCTCGAACACACGATCTCTGATGCCAAATTCGTTGCTCAGTAATGAGACAGGCTGGGACCCGGGACTGTTTACCAGAGCGCTTGCACCTGGACATACACGAGGGCACACGTGGGGGCAATCATGAACAATGAGCTGCGGAAGGCCACAAACCAACCACCAGGGCTGAGGCTCGGAAGGTAAAGCGAAGCGCTGAGGCAGATCTCTGCGCACTGCCCCACCCAGGGGGCGGGCAGACCGCCCAAGCTGACCCCGGCCCCACCCGACCTGGTTAAGGGCCCAGCCCGCCCCTAAGAGCCGCAAAGCCACCTGGTGCTTGTTCCCACTGCGCAAGTGGCAGGAGCTCCAATAATCCTCACCTGAATTTCTCATCTGGCCTCATCGATTTCTGTTGATCAAAGAGTCCAAGGACTCGGGTCAGTGCTATACTTGGCGACCACCCTCGTGGGCTGTCCGTGGGGCCTTTGCCTCTTCCCTGGGAGAGGATGCAGGCACCTCCGGGACCATCGAACAAGCTTCCCTGAGCGGCCGGGACCCCTTGCTTCAGCTTCTCCCGTTCGGGGATGCCGGTTCAATCCCTGGTCCGGGAAGACCCACATACCATGGGGCAACTAAGCCTGCACCAACAACTGAGCCCGTGTGCCGCGACTGCAGAGGCCGAGCGCCTGCGCCGCACAAGAGAAGCCGCCGCAACGAGAAGCCTGTGCACCACGGTGAAGAGCAGCCCCTACGCACAAAACTGGAGACAGCTCACCAGCAACAAGGGCCCAGCACAGCCAAAATAAATAAGTACATAAATATATTTTTTAAAGGAGCAGAATCTATTTAAAAAATTAAAAATAAAGAGTTCAAACACCTGGTTCAGTAACAGCAACACTACAATTTCTAATGATCTCCGTTGCTATTTCTACCTTTCTTGTTTTTTGCAGCCATTGAAATTTTAAGCCATTCTGTAAATACAAAGCCAAGTAATTATCAGAATCCCAATGGGATGAATTAGAGATGTCAGTACAATACATGATTTGAGGAGAAATCTTTAATGCATACCAGTGTTAAACACTTAAATTCTTGAATATGTGAGGGAGGAAAAAGCATCTTTTCTTTTGCTGTATATTTGTGAAAAACAAGATGACATTCTCAAAATGGAGTCACTGATGCTGAGCTCCACATCACCAAACTTCACTTAATTACTGCTTCAGACTCTCCCCGAAATAGGATCTTAAACCAGGGAATCAGGAATTGCC TCONS_00096461 s 3' 3659 TCONS_00096461 s 3' 1039 EMBV3_24627 CACAGATACGTGTGTGGGTGTGTTCCCCTCTCCAATGTGTTTTCTAAATCTTGGCTCACT Gene GeneID:533089|CENPF:XM_002694283:326_cdna Constitutive 0 NULL GeneID:533089 16 GENE CENPF NULL centromere protein F, 350/400ka (mitosin) EMBV3_21467 TCCAGTAAGGACGAGAGGAGAAGAGATTCTTAGCGGCAGAAAGTGGCAGGAGGGACTTCT Gene BVT0102_209200 + 0 NULL GK000022.2:43561146-43569313 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40282 GAAACTTGAACAGAAGAAGCAAAGTGAAGCATCCAGTGAGACCCAGGAGCAGCCATCCAG Gene GeneID:780786|PRKRIP1:NM_001079641:344_cdna Constitutive 0 NULL GeneID:780786 25 GENE PRKRIP1 MGC137484 PRKR interacting protein 1 (IL11 inducible) EMBV3_37774 CGTGTGCACCAGTGACTTTGTGATCTACGGAACCATCCTCGGAGTTGCCCACAACGCAGA Gene GeneID:515528|METRN:NM_001102026:171_cdna Constitutive 0 NULL GeneID:515528 25 GENE METRN MGC159693 meteorin, glial cell differentiation regulator EMBV3_29635 TCCCAAGATCATCCAGTTGAATGGGGAAATGGAGAGTCCAACATGGTTCTGATGCTTTGC Gene BVV0102_413404 + 0 NULL GK000008.2:104257913-104273193 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228981 TCONS_00228979 TCONS_00228980 TCONS_00228983 TCONS_00228982 1 XLOC_138628 Coding TCONS_00228980 XLOC_138628 Coding Coding WDR31 8:104271384-104281307 j TSS170579 3072 3 TCONS_00228980_4 74 0.111002604166667 4 0.690788147550897 0.000203820523285803 2.93874889317711e-20 0.000164288072099941 0.00035788405303479 7.36862292739871e-05 8.70283824724028e-05 0.000492244689649964 0.000242892920316159 7.26533019729054e-19 3.06055914232686e-05 3.04084189400958e-10 2.11894155732193e-05 5.0422655910306e-09 1.24512240992943e-08 2.23696384750372e-05 4.92785701777886e-19 0 9.72254406473561e-21 8.09447101051051e-05 0.000429632174439737 1.47516045535213e-05 0 4.12602095047765e-43 1.30829270828026e-178 0.00032413782330374 5.72213308106438e-05 2.81389207058091e-06 2.35993373761968e-16 1.21740034790462e-05 3.92386340551189e-11 XM_005210566.1 WDR31 PREDICTED: Bos taurus WD repeat domain 31 (WDR31), transcript 0.0 1689 99.89 0.305338541666667 NM_145241.3 WDR31 Homo sapiens WD repeat domain 31 (WDR31), transcript variant 3, 0.0 829 82.60 0.262369791666667 TCONS_00228980_4 sp|Q8NA23|WDR31_HUMAN WDR31_HUMAN WD repeat-containing protein 31; 5e-40 137 87.84 0.986486486486487 0 noncoding 0 0 1 1 -0.00937350580232613 0.939583658885714 0.00443381034031205 0.941212135285621 CGGTAGCAGACTGATGTCAACTCCACTGCCTATGAGCTTAGTCATACCTGGGTTTAAAGCATGGATACATCACTTTTTAGCTGTATTAACCCAAGAAAGTTACTAGAAGTCTCGGTGTCTTCATTTATAAAATGGGGAGAACTGTATCACCCGACATGGCAGTGTCCTATAGTGGTTGTCGGACGTTAGTCACGTGATCTTTCCGAGTTTTGAAGACAACTGCCAGTGGCAAGCTGTGCTCGCCTGTGCCCTCCGTATTTGTGTAGGCTGCTGGAAGAAGTGAAAACCGTGTTGCCTCGGGTTGTTTTGAAAACTGTTTCACGCATATCCAGCAGGGGGCTGCAGGGATAAAGGGAAACAGGGACACGCTTCCTGAACCCGAAGAGGCCTCAAATTAGTGTTTCATCGGTCCCACTTGAAAGCAGAGGCCGCTCTCCTTAGCTGCCACTCGGCCAGCGGTGTTTGGGTTTCAGACACTCTGAGAGTGCTGCATGCATTTCGAGGCTCACGCCTGGTCCAGGTGCTTCCGTTGCTGCTGATAACGTAGGAGCTGCAGCTTGAGCATGACCGGTGGGCCTCTGCACCACATAAAATCCCTCTTAAGTCAGATGTGCTAGGCTCAGCATCCTTGAGAAGTGATGACAGGGATGCTCTTTAGTGACATTTACAGAAATTACAGCGGAGAAATGGCATGGTGTGGAGAAGTTTTGAAACTTTTGCTTTTTCCAGGTCACTCACTTGTGCTGGGTCCCCCGAGAACATTACATACTCCAGACCTCCGAGGATAAAACCATCAGACTGTGGGACAGTCGGGGGCTGCAGGTAGCTCATACATTTCCCACCCAGCAGCACATCCAGACGTACTGCGAGGTCAGTGAGGATGGGCACAAGTGTGTCTCCTGCAGCAGCGGCTTTGAAGGGGAAGGCTGTGAAGCGACGCTGTGGGACCTGAGGCAGACACGGAGCAGAATCTGTGAGTACAGGGGACATTTCCAGACTGTTGCGTCCTGTATCTTTCTACCCAGAGCTTTAGCCTCGATGCCTGCAATTGCTACCTCATCACATGACTGCAAGGTGAAGATCTGGAATCAAGACACTGGAGCCTGCCTTTTCACCTTGTCTCTGGATGGATCAGGACCTTTGACTTCCCTGGCGGTGGCCGACTCCGTCTCCTTATTGTGTGTGAGTTTCAGCAGAGGAATTCACTTACTCAGGGTGGACCGCAGCCAAGGGCTGGAACTGCGGGAAGTGGCAGCATTCTGAGGCCAAGAGACCTTCAGTGGACAAGAGCAAACTGTGGCCTCTTCTTTCTCAGTGTGACTTTGTGTTTTTCCATGTCCTCCTGAGGGGAGGGTGATGTGGAGCTGATGCTCTTGGCTTAGGTTCCCTTGGAAGATATGTCAGTGTTAGAAGTCAATTTAAGTCAAAATCAGGTGCAGAGATTAGAAATACAGGACTCAAATGTGGTTCTCAATTCAAATTAAATCCAAGTACAATTTTTAGTGAGCGTTGGGGACTACTCTTTAAGAAAAGTGAGTTTATGAGCCTCTCGCCTTTTGAGATGGCCCACACTCTTTTATCTGTGGAGTGTTTCTCCCAAGGCCATCTTACCTTCCGAGATGGACTGCATTATGTTCATGGAATGTGTATCTCTCTTAAAAAAAGAAAAAGGTTTATAGCTCAGAATGATGACCTGTGGGTATAAGAGTGATAGGCCTCTGTCTGTGAGAGTCAGAACACAGGTCTGAGTCTACTGAATTGACCTTTTCCATGTCTCCACAAAAGAAAAAAGTGTAGCGGAGAGAGAAACTGTTGTGGTTGCCTCACAATTATCTAGATGGGAAAGGTTAGTGCAGCTCCATGGAAGAAATTGATTGCAGACATGAGATTAAGCTCTAATCACAGCCCCTTCCCAGTGTGAAGAGTCAAAGTTAGGGCCAGGAAGCAAAAGCCACCCGGGTAAGTGCTGCATGAACAGGAAGCCTGCAATGGCGGGCAAAGAGGCTGACAGCCACCCTGCCTGCCCGGAGTCGGACGGATCATCAGACCCATTCCATGGACACGGGAACCGAGAGATTAAGGCTAAGAAGAATTTCATTTGTGTATTTTAGTATCTGTACTTAGTTTTATATAACCCTTCCTGGGAGATGGCCAGAGTGAGGCAAAGGGAGTGCCTGCCATGACAATGGAACACGTAGAAAGAAGTAGAAAGATGGACTCAACCGTGCCAGCCACTGAGCCCCCCTCGGTGAAGAGGAGCGGAGTGCTCCCATCTGTCTGGGTGGTCCCCAGGAGATCGGTCCCGAGCCTGGTGCTCACAAGCCTGCTTTCCTCCAGGGAAAGTAGACTCACTCCTGCCTCCAGGCAAGCCCACACATAAGGCAGCTGAGGCCTAGAAAGTCCCTTGCTGATGAGTCCCAAAGAGTCCTCTCTGGCCCCTGCCTGACCCTGATACCTGTCCCTGACAGCCATCTTCCATGTCCCCCTCTTGCTCCTCTTTGGGGCCAGCTCCTCCATGCTGTCTCCACCACCGGAGAGGAGCATCTTAAGCTGATGCAAAGCATCAGAACCATGTTGGACTCTCCATTTCCCCATTCAACTGGATGATCTTGGGAAAGTTAAAAAACCTCAATTTCCTCACTTAGAAGATGGAGCTCATAACCCTACTTTCGTCACAGGGCTGTTCTGAGAATTGGACCATGTTAAATGCCAAGCAAGCTGCTGGATGCTTACAGTTGGCAGCCCCAGCTCCTCACTGCCCTCTTTGCCCAGACTAAATGCTGTCCTTCCCATGTGACACATTCACCACTCCTTCACCCATTCTCCTTAGATGATGATTTCTAACCCTTCAGTCATTGTTCAGCTTCCCTGTGATCCCTTAAGTTACAGATTTTTGAGCCCTAGAAGGACATGGTGAGAGAGGAAGAGGCCTCACTGAGCACCATATGGCTGAACACACATATTCCCACTGTGGTTCTGCTAGTCCCCTGTCACAGATGAGAAAACTGAGGCCTGGGGACATGCAGTCCTCTGCCCGAGGTTACACACGTGGGGAGGAGCCCTTTGCCTCAC EMBV3_26661 ACATCCCGGCGATCTGCCCGAGTCACCCGCTCTTCTGAATCTGACATAGACATCTCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02684 CCTGGAAGTGGTACAGAGGACAGACAGGGTTTTAATGCTGCCCTGTGTGGAATTCATCTG Gene GeneID:533992|DRAM1:XM_002687635:788_cdna Constitutive 1 NULL GeneID:533992 5 GENE DRAM1 DRAM FLJ11259 DNA-damage regulated autophagy modulator 1 EMBV3_39043 ACCATTGTTGTGCTGTTGCATAGTCACTGAGTCGTGTCCAACTCTTTTGCAACCCCAGGG Gene BVT0102_336373 + 1 EMBV3_18759 GK000017.2:64426504-64443982 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22422 TAATTACTTCAGTTCCACCAAAACCGAATCAAGACCCAAGTTCTTTGTCCCCCGCGTCCC Gene GeneID:100296141|LOC100296141:XM_002697082:613_cdna Constitutive 0 NULL GeneID:100296141 22 GENE LOC100296141 NULL hypothetical protein LOC100296141 EMBV3_19750 CTACATGAAAGAGTCCTTTGTTAGTCAGAATGCAACAACTGTCATCCGGTGGTCACTGAC Gene BVT0102_145932 + 0 NULL GK000026.2:6855768-6905321 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149926 TCONS_00151334 TCONS_00151333 2 XLOC_091768 XLOC_092091 Coding TCONS_00151333 XLOC_092091 Coding Coding PRKG1 26:6901758-6954368 j TSS113152 5297 1 TCONS_00151333_1 283 9 0.899484879013097 0.00157784363249575 0.00208897948293258 0.00124086795454426 7.1366051057105e-08 0.00119474269541424 5.12057664472665e-09 0.000242999587318221 0.00118503924479236 0.00225280104657678 0.000234016528656462 2.35697129421096e-10 0.000114191071467041 0.00025142201323616 6.45957218520279e-10 0.00110208714212052 0.00134882129634269 3.25203160199268e-05 0.000431519382396927 0.00140429357920802 0.00206060675121467 0.000766705898445886 0.000505191624849564 0.000538510549108639 0.000659776539484822 0.000854754030118707 0.00118537485624976 0.00127177273472332 2.82096066622469e-05 2.10913630771842e-05 3.74730234229236e-05 XM_005225353.1 PRKG1 PREDICTED: Bos taurus protein kinase, cGMP-dependent, type I (PRKG1), transcript variant X1, mRNA. 0.0 9396 99.94 0.984897111572588 XM_005269970.1 PRKG1 PREDICTED: Homo sapiens protein kinase, cGMP-dependent, type I (PRKG1), transcript variant X1, mRNA. 0.0 3126 82.19 0.585425712667548 TCONS_00151333_1 sp|Q13976|KGP1_HUMAN KGP1_HUMAN cGMP-dependent protein kinase 1; 0.0 600 100.00 0.996466431095406 3 coding 0 0 0 0 0.0643674340417107 0.804753210701348 -0.0344412791862088 0.503305707012208 GCCTAGGAACTGACTCTCTCAATACCAAGTACATAATATTTATATCTTGAACCTACCAACCCTTACTTCAGTAGTAATGTTGATCAGGTCCAGTTAAAAAGTGAAGAATCCAAAACCTTTGCAATGAAGATTCTCAAGAAACGCCACATCGTGGATACAAGACAGCAGGAACACATCCGCTCGGAGAAGCAGATCATGCAGGGGGCCCATTCGGACTTCATAGTGAGATTATACAGAACATTTAAGGACAGCAAATATTTGTATATGTTGATGGAAGCTTGCCTAGGTGGAGAGCTCTGGACCATTCTCAGGGATCGGGGGTCATTTGAAGATTCTACAACCAGATTTTATACAGCATGTGTGGTAGAAGCTTTTGCCTATCTGCATTCCAAAGGAATCATTTACAGGGACCTCAAGCCTGAAAATCTCATCCTAGATCACCGAGGTTATGCCAAACTGGTTGATTTTGGCTTTGCAAAGAAAATAGGATTTGGAAAGAAAACATGGACTTTTTGTGGGACTCCAGAATATGTAGCCCCAGAGATCATCCTGAACAAAGGCCATGACATTTCAGCCGACTATTGGTCACTGGGAATCCTCATGTATGAGCTTCTGACTGGCAGCCCACCTTTCTCAGGCCCAGATCCTATGAAAACCTATAACATCATATTGAGGGGGATTGACATGATAGAGTTTCCAAAGAAGATTGCCAAAAATGCTGCTAATTTAATTAAAAAACTATGCAGGGATAATCCATCAGAAAGATTAGGGAATTTGAAAAACGGAGTGAAAGACATTCAAAAGCACAAATGGTTTGAGGGCTTTAATTGGGAAGGCTTAAGAAAAGGCACCTTGACACCTCCTATAATACCAAGTGTTGCATCACCCACAGACACAAGCAATTTTGACAGTTTCCCTGAGGACAATGACGAACCGCCACCTGATGACAACTCAGGATGGGACATAGACTTCTAATGTATTTCTCTTACCTGCTTCTGCCTTGCTGAAGACAGCTTTTTCTAAGACACAGCTGCCAGCAAACCTGAAGGAAAGAGAGAAGCTGAGTGCTTGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACTTATTGCTTAGATGACAGTAGTGCTCTTTACATGTTTTCTGTTTGAACCTAAATATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCACTAAAGAGATGTTCTCCACTGTTGCAATGATCTTGCTTTGCTCTGATTATAATTTGAAAGACTGTAAGAAACACTTCAATCTAGTAAAAGAGTCAGTACCTTGCTAGAATTATCAAGAAGATCAAAAAATAATATATTGGGTACGATAGATTACTATGGTACAAAAACTGGACTCTTCCTTTCTTCAGGTGAGGGTTGTCGGTTCTGTTTCTGCAAGCCAGTGTATATACCGTACACAAGAGGACCACACATCTGTTGGTCACAGAGGTCATGTCAAACCAGTGCTAGAAGTTTCATGATTTTATTTCCCAGCAGTGCTGATGACGAGTCTGAATGTTACCTTTCCTTTCTGACAGATTTTAAAAATTGGTATGATAAAAGCACAACTGCTATGGATTCTGCTGAGAAATTTCATAGCAGGTACATACGTGTTTTCACAGAGGACTGAAGAAAAATCAACATGCATGATGTATCTGTTCATTTCTTTTTGATAAATTGGCATGACAGAATGGGGGAAAAAAAGCAATTCACAAACCATTTCATATTTTTTTAAATAGTGTGCTTAAAGATGGTCCTGGAAATAAATGACTAGCAGCCAATTGGCTTTTATTTGTTACCTAACACACCCTCAAACTGAGGCTTAAAATATTCCCTTTTATAAAAATAAACCCTTACGATAGGGCGGGGTGGAGAGGGATTAAGATCCATCCAAAAAAAAAACAATATAGGTGCTATGTATATCTTTCATCTGTAAATGTCAGTGTCTGAACAGACAACACAAATTCTAATCATTATATGTGTAGCCAGAGAATCAAGCATTTTCACTCAAGTTATCAAACCAAACTCCTGTCAGATTTCACTTATACAGCATAGTCTAAGGTAAAGGGAGAAAGGGGACTAAAAATGTATTTGAACTAGCTTCCTGTCTTAGGCCTGAACCAAAAAAGAAAAGAAAGCACAAAACCATTGATTCACCAGATGAGAAACCTAACTTTATGAGGTCAGGAACAAGAGAAGAACCTGGCCAGGTGTGAGATTACCTTTTTGTCCATGGCAATATGCGTCTATTAACATGTGAAAGGAGGAGGAAGGAGAGAGAGAGAAAGAGGAACCTGCTATCTTAAAAGTAAATTAGAGCTAAATAGAACAGAAATATTACAAATCTGAAATATCATAATAGCTAGGAAAAGATTAGGTTTGAAAATAACAAACTGATTTCATGGAGAAAAGAATTGGCAAAGAGTCCTTTATCGGCAGGCCAGTTGGCAACTATTAGCTGTCCTAAGGAGCAGAGCCAACTAGCATTATAACTCCTTAGACAAATGTGTAGTTTTACAAGCTGTCATCCTGATTTGAAACTGTGTGAATATGGCATAGTAAATAGAGGTTTGCTTTTTTGTTTTAAAAACTCAATCAAATGTATACATTTCTATAAAACATATGTCCAACTAGATCATTATATAGTATTCAAGAAGGCATATATTATGATTTTTGTTTGAAGTTTTCACAACAAGGCTTTACGATACATTATCAAAACAACAATCTCAGAAACATTTGGAGAACAAAAGTACTAAGGGCGTATTATATGTAATTACAATAAATTTAAAATTTTGATCTTAAGATATTATTATTCTCCTATTATTGGATTTTTCCCTCCCTTAATAATTTCTCAAAATTGTTCCTCAAGATACCTTCTTCTGCAGGTTTTAAAAAACAATATTAAACATAGCAATCTAAAATCCAGCTAGTAATGCTACTTCAGAAGTTTAATATTGCTTTTAATTGGGGCTTTTAAAAATATATAATTGCAACATTACATTCAATGTTCAGTGATTTTTTTTAAGACAGTGGTTTAGGCATGCTAAAGGTTTGCTAGAAAATGAAATTTACCTAGTCATTTTAAATAAGAGAATCTTCTCCTGCAACTTTTAAAATATCCCACTAGCCCCAGAAATCAGCACTTACTCTGGGTTTGGAGCTATGGTTCAAGTCTAAGACAACCAATATGTTCAAGTTTTGTGGAGAAGGAAGAAGCGGCATTGAGCATAATGTAACTGTAGGTCATCTCTCCCACTTGTTATTGCATCTTTGCTCATTTCACTTGTGGCGCTGCGTTAGGCTGTCCAAAGCAATCACCAAAAATACAAGTGAACTACATCTTACAAGAGTTACTAAGAGAAAACATTCATCTAATGTTCAACAGTGAATTTTAAGGATTTAAATCCTGTCTTAATGATGACACTAGGGCTAAAATTCATGGCTGGCTTCATAAAGCACATCTCACTTGATTTCTGAATTTTTCATGCCCCTTCTCATTTCTTACAAGAACATCCAGATAAGTTAGAATAGTGGCAACTTGTTTGATCTGTTAGCTGACATTCTTGTTAATATTTCAAGTATGGAATATAAGGGCTTTCTGTGTGTCCTGGCTCACAGGAAAACTGAAAACTGCCAAGGAAAGGAACACCATTATACTTGAGATAGATTGACTACATTAGGGAAAATGATTTCTGGAAATTTGCTATGAATGATTATTTTTATGTTTCTACCTTCTTTAATATAGGAATCAGATCCACATGCCATTTAAAACAAATTTATTTTTATTATATTCTTTACAAATCATAATTTTTACCTAAAATTATGGAATATGCATGTGAAGCACACATGTATACTATATAAATTCAACTACTGAATTTTTCCTGTTTCATTTCTAAAAGACTGAACTCATGGTGAACTTAAAGAAGTCAGCTACCATGAAAATAAGGCTATTAGAACTGATTTCATACAGTAGAGATGATTTGTGCATTCTCCATAACAATGTTTTCTTTCACAATAGGACCACAGACAAATATTTATGTAAATAGATATTTTTGTGTGATATTTTGTGGTACATATAACTTTTTTTTAGTGTTTCACAGCATTATTATTTCATTTAATTTGTATGGAATAAAGTTTTTAGGTCCAAGTAGACTTGAATTAATGTCCTGATTGTCAGTATTATTGAAAATTCTGTCAACTGTACTGTTATTCATCCGTCCCATAGTTTAGAACATGACCTGGCTATCTGGCATTGTTGCAAGTGCCTTAAATTCATGGCATCCTATTAAAAAAACAAATTTGGTGTTATGCTGCATGACAAAGACAAACACACCTCAAAACGTTGTCCTTTCTTAGCTTGCTGCGTTTTACAGTTCTTTCTGCTGACAATTTATAAGCCTTTATTATATAATATTGATGAATTACAGAAATGATGAAGTTGTTCTCTTATTTCTGTTCAATGTACCAGAGCTGTGTATCTGTTAATGAGATACAGCGTCATTTCTGTGAAATGTATAAATGTATGTGCAGGTCAAATTAATATATGACATACTATCAGTCTGTATACAGGTATTCCTGTTTTGCTAAGTTGTGCAGATTCAGTTTAAAAAAAAAATTAGTGCAGTCAAGTTATGAAATCTCCTTTTTTAGATTCTGTGAAAAACCATCCAACTCAAAAGAAAAATTGGAAAATGACTGCTGACCAAGCCTCATCATGAAACCAATAATGAACAAATTGCACCACTCAACAAAACAGGATGCTTCCTCTGAGTTCTTGTATATGCAAATCACTTACAAGGCAAGTTTTCAACAGACCTAGAAAGCTAAACGTTGACCGTGTGTTGTTAGCCCTCCTCTTTATCTGCCCTTGCATCAACAGACAGAGCTCTGGGACATGACAGTGACTCAGAGGTTTGGACTTCCGAGTAAAGGGACATTTCTTGAAGCATCATCTATCAAATTTATTTCAGTGTATGATGTTTTTACAACTGGTCGGTTCTTTTGTATTCTTACAGCTATGGTTATTTGATTGTCCTCTTACAATTTGTTCTACATGAAAGAGTCCTTTGTTAGTCAGAATGCAACAACTGTCATCCGGTGGTCACTGACCACTTGCACTCTTTTGATGTAGATTAAAAACTTTTTCATAAACTTAACCTGCTTTGATTTGCTCTGTATTTTTCCTGCAGCTGTAATTGCCGAGTGCCTGTTGTATACTTTATAGAGTTGAAATAAAAAAATAATTACTTTTGAAC EMBV3_34798 CACCAAAGAAGCCCCCAAGTGCGAAGCCCAACATCCCTTATGAAAACTTCTATGAAGCCC Gene GeneID:281967|PCSK1:NM_174412:11_cdna Constitutive 0 NULL GeneID:281967 7 GENE PCSK1 PC1 PC3 proprotein convertase subtilisin/kexin type 1 EMBV3_22355 TGTTAAATCTTAAATACGCCCTTTAAAAACTGGAATAATGTATTAAGGTCAAATAATATC Gene GeneID:505285|PTPRE:XM_002698569:98_cdna Constitutive 2 NULL GeneID:505285 26 GENE PTPRE NULL protein tyrosine phosphatase, receptor type, E EMBV3_34257 CCCTACAGCTTCTCTTACGCCAGCGCTTTTTTCACAGACACCCATCTTACTGACTCCAAG Gene GeneID:540309|ELK4:NM_001081612:103_cdna Constitutive 0 NULL GeneID:540309 16 GENE ELK4 MGC151835 ELK4, ETS-domain protein (SRF accessory protein 1) EMBV3_41699 CTGCCCCTGGTGGATTTCATCATCCAAAATGGTGGTCACCTGGATGCCAAAGCTGCTGAT Gene GeneID:523797|ASAP3:NM_001083446:194_cdna Constitutive 1 NULL GeneID:523797 2 GENE ASAP3 DDEFL1 MGC155101 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 EMBV3_03592 TGACTTGCCCAAGAACCACTATGTGGCAAAAGAAAATGAAGCACCCCGAACTTCCCTTGC Gene GeneID:534558|DERA:NM_001076028:41_cdna Constitutive 1 NULL GeneID:534558 5 GENE DERA MGC126989 2-deoxyribose-5-phosphate aldolase homolog (C. elegans) EMBV3_35039 ATGGACCTGATCGAGCAGGTGGAGAAGCGGACCCCCACGTCTTCCCCGAGGGCTCCGAGC Variant GeneID:540984|OTUB1:NM_001034719:95_cdna 476^752 3 EMBV3_00912 GeneID:540984 29 GENE OTUB1 MGC127210 OTU domain, ubiquitin aldehyde binding 1 EMBV3_10332 CGCTCTCTGCGGTCAGATGGTGCTGGGATCCTACTTGGCTGGACTTTCTGCTTCTATATT Gene GeneID:506409|LOC506409:XM_002693806:39_cdna Constitutive 0 NULL GeneID:506409 15 GENE LOC506409 NULL similar to Olfactory receptor 5AN1 (Olfactory receptor OR11-244) EMBV3_41860 AGCATTCCCAAGGCTGTGTGAGAACTGCCCCAGAGGTGTGTTAAAATTCTCATTCTGGGC Gene BVV0102_398511 + 0 NULL GK000001.2:111853974-111996967 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004866 TCONS_00004864 1 XLOC_001125 Coding TCONS_00004866 XLOC_001125 Coding Coding - 1:111896032-111904580 - TSS2412 1340 3 TCONS_00004866_1 76 0.428358208955224 5 0.843804843804844 0.00034737100653358 0.000879984599273691 0.000168171764618502 0.000319557357207095 0.000271880041122371 9.10784747319152e-32 3.50186128766496e-05 5.29667338666188e-05 5.9424850342908e-05 0 0 0 1.7512985355687e-85 3.62097375995522e-120 0 6.21517147071555e-128 0 0 0.00126267123976013 0.000129002176535649 3.45326169132909e-19 4.1267179745612e-137 6.65128206057823e-35 3.17978435750252e-136 9.3390308652035e-05 3.23779903480203e-19 3.10969690885609e-05 0 0 3.91661181136889e-106 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 4e-140 502 92.22 0.255970149253731 0 coding 0 0 1 1 0.0379823153651609 0.809404893239721 0.0249941654679672 0.707123872738758 GGTGTTTTAAGCCCTCCAGGTGACTCCTGTGCTTGCTGAAGTTTGACAAACACTAGTCTAAGCCAGTTTACCATGAACTTGGTCCCTAATTTCCCAGACTCACAACACCTGGTCATGTGACCCAGCTCCAGCCAATGAGATCTAGTAGAGGTCTGGGAAGAAGTGGCTTCTGGGAAGGCTCTTACTTTCTTGATGCTGGAGGACTGACAAGGCTGGCAGTATGTGTCTGCTTCATCCTTCCTCGCCATCTTGAAGGTGACCTCAAGCAACAAGGGGCCAGAACTATGTGGACTTTGATTTGGAATGTCCTTCCTACCCAGCCCTATCCCCCTTCTGCTTGGGCTCAGGGTCCTGTTTTTCAGTGAAAAATGGCAGGACTGGGGCTCAAGAAAGCCGAGTGCAGGTTCAATCTGTTCATTGACAGTGAGAACTTAGATAAGTCACTCGCCTGTCCCAGAGCGGCTTGCCTTCCTCTGAGAACTGGGGCTGAGCCTGTGAGAACAGCCCCCCAGGTTCTTGGAAGATCAAGTAAAGTAAGGTACCCTATGAGGTGTTGAGGAGGTGCTGTTAGTGACAAGAAGAGGTCAGGTCAGCATTCCCAAGGCTGTGTGAGAACTGCCCCAGAGGTGTGTTAAAATTCTCATTCTGGGCCTCCACTGCAATCTACTGAATCAGGATTTCCAGAGGCACCTGGGACTAGATGTCCCCCACGCCTGCATCCACCACATTGGCCACCCCTCCTCATTCCCCTGCAGCACATTCCAGCACTGGCCTTGTGCTACCGACCTCAGAGGAGACAAACATGAAGAAGAGGGATCTTTTGTCCTTAAGCCACCAGGCTTATATGGGGAAAGAGGAGAGGCTGAGACGAGCACACAGATAACCCCAACCCAAAGGATCTGGCAAGCACCATAAGAATTGTGTGAATTGTGAAAGGATCTTAAGGAGGGTGGTCACCTTCAAAAGACTTGACAGAGAAAGTGTGGTATTAGAGTGCAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTCTTTCAAATCCTGAAAGATGATGCTCTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCGGTTTTCATTCCAATTCCAAAGAAAGACGATGCCAAAGAATGCTCAAACTACCACACAATTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAGTTCTCCAAGCCAGCCTTCAGCAATACATGAACCGTGAACTTCCAGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCGCTGGATCATGG TCONS_00004862 s 3' 7948 TCONS_00004862 s 5' 0 EMBV3_09987 TCTTTCCAAATACGTCAGACCCCCAAGAAGTTCTGCGATTAGATAATGCACCGGAACCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36605 GACATTGACCTCAACGGGGACGGCCTGGTGGACTTCGAAGAGTTTGTGCGAATGATGTCT Gene GeneID:281654|CABP2:NM_174255:452_cdna Constitutive 0 NULL GeneID:281654 29 GENE CABP2 NULL calcium binding protein 2 EMBV3_23827 CTGGAAGTGTGTCTGCACCTTGTCAGGCTTCCACTCCAGGACCATTTATGACGTCGCTTG Gene GeneID:540069|CIAO1:NM_001037482:92_cdna UTR3_Alt 2 NULL GeneID:540069 11 GENE CIAO1 MGC127264 WDR39 cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae) EMBV3_04648 TACACGATCGCCGTGGTGGTGTTCCATTTCATCGTTCCGATGCTCGTAGTCATCTTCTGT Gene GeneID:539948|MTNR1A:XM_002698656:112_cdna Constitutive 0 NULL GeneID:539948 27 GENE MTNR1A NULL melatonin receptor 1A EMBV3_00503 CTTTCCCGCCCTACGGCCACTACGGGAACACCCTTCGGCTTCCGGACCGCGCCTCCCTTG Variant GeneID:100140032|PRDM14:XM_002692723:171_cdna 134^207 1 EMBV3_33985 GeneID:100140032 14 GENE PRDM14 NULL PR domain containing 14 EMBV3_22372 GCACTTGAATGCTCTAACAGGGTTGTTTATTGCCCTTTCTACGTTCTGGACTCCTTGCCG Gene GeneID:781886|LOC781886:XR_084688:104_cdna Constitutive 0 NULL GeneID:781886 5 PSEUDO LOC781886 NULL similar to Coiled-coil domain-containing protein 131 (Proline/serine-rich coiled-coil protein 2) EMBV3_07663 TGTGTGAATGCCACTTTACCAGCAACAGGAAGGGGGTGCCTACTTTTTCATCTTGCCCAC Gene BVV0102_245593 + 0 NULL GK000005.2:62392232-63027193 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195303 1 XLOC_118017 NonCoding TCONS_00195303 XLOC_118017 NonCoding NonCoding - 5:62994035-63001191 - TSS145570 541 1 TCONS_00195303_1 43 0.432532347504621 3 0.924807826694619 0.000156114334535459 6.11485385132757e-05 0.000652019223475889 4.68144273591916e-09 0 8.59548380174814e-05 0 0 0.000269809637306936 0 0 0 0 0 2.94017196755247e-10 0 0 0 4.17941972431286e-10 2.05613710192942e-11 0 0 0 0 0.00029455665500991 0 0 0 0 0 0 noncoding 0 0 0 0 -0.14722007937101 0.463715561418625 0.0349616429121798 0.455660858434463 AAGTGCAGTCATTGTGGCAGGGTCTCAGAAGATAAACTGAACAGATCCCCAGGTCAAGTTTGGTTTCAGCAACTGAGAGAACCCAAGTGCTCCTGGAAAGTGAGGGGTCAGGTCAAGAGTGAGTTCTGGGAACCACAGGATATGCCACAGTTGGACCATCTGGTGGAGTTGTGGACGCTTTACCCTCTAAGCCACCAGTGGTAGCCTCACAGCCAGAAACAAAAGACTACACGGAAGACTGCTTCACAGCATCAGCCACTGAAGACCCTGCTGGAGCAGCCACACTGGGACATCTGCAGCCTTCACGCTGGCCACCTCCCCCTCTCCCAGAATAATCCTGTACACTACCTGTTGCCTCCTATTGTTCTGCAAGTTGAATTTACATATGGGTGTATCTGATCAGCAAAGCCTATGTCACACGTCGGCAAGCCTAGCTGCAAGAGAGGGCCAAGAAAAGTTTGTGTGAATGCCACTTTACCAGCAACAGGAAGGGGGTGCCTACTTTTTCATCTTGCCCACGACATCCTGCATCAGATGTTTC TCONS_00192213 r 5' 30873 TCONS_00192213 r 5' 23803 EMBV3_33935 ACATCAGAGTCCAGACCACCCCTGATTTCAGCTCCAGTGACTCCTCCTTCCATCCCTCTT Gene BVT0102_004059 - 1 EMBV3_12804 GK000002.2:127818514-127821033 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103883 TCONS_00103887 TCONS_00103888 TCONS_00103895 TCONS_00103880 TCONS_00103882 TCONS_00103885 TCONS_00103892 TCONS_00103889 TCONS_00103891 TCONS_00103886 TCONS_00103881 TCONS_00103893 1 XLOC_062241 Coding TCONS_00103882 XLOC_062241 Coding Coding PAQR7 2:127808526-127820187 j TSS77052 3080 1 TCONS_00103882_3 350 0.0948051948051948 3 0.736106346483705 0.00489339807725668 0.00202244877561641 0.00149689531475386 0.00192268625264905 0.00012528600366232 0.000584475474121952 0.000999960991587187 0.000537405754467857 0.002212239251707 0.000188429796745678 1.08368896255498e-75 5.55411905096683e-29 0.000457509656815878 9.97392167496992e-68 6.17591269821213e-05 1.25227255551524e-36 0 7.09355425735187e-33 0.00220553868931034 0.00679395639604628 0.000122803382437455 4.13305730030587e-07 5.31171275181916e-26 5.19612737066627e-23 2.48287501511679e-33 0.000713527474959856 0.00163501514351503 2.29377398795406e-117 3.44688326022037e-236 6.19422253876729e-23 XM_005203177.1 PAQR7 PREDICTED: Bos taurus progestin and adipoQ receptor family member VII (PAQR7), transcript variant X8, mRNA. 0.0 4176 100.00 0.751298701298701 XM_005245745.1 PAQR7 PREDICTED: Homo sapiens progestin and adipoQ receptor family member VII (PAQR7), transcript variant X1, mRNA. 0.0 1943 81.08 0.670779220779221 TCONS_00103882_3 sp|Q86WK9|MPRA_HUMAN MPRA_HUMAN Membrane progestin receptor alpha; 0.0 617 91.57 0.98 1 coding 1 1 1 1 -2.66769741696451 0.00503532178761517 -1.30936326404593 0.000390900188013333 AGTTCTCCCCCGACTCGGGGCGGGGCCTCCGCCCGGCCGCCCCCTTTTATCTGCGCTCCGGATGCCTGGATGCCGAGGGCAGCCTCTCGCAGATCGGCTCGGCCTCAGGGGACAGAAGCCAGTCAAGTTTGCCTGATATCCATCAACCAGGCCCTGGACATTTGGTCTCAGCCCAGCTTTGCCTGCCTTGCCGTGTGATCTTGGCCCCCTGCCCAGCCCACAGCCATGGCCACAATCGTGGCCCAGAAGCTCAGCCACCTCCTGCCCAGTCTGCGGCAGGTCCACCAGGAGCCTCAGCCGTCTGTGCCATCAGAGCCTGTGTTCACCGTGGATCGAGCCGAGGTGCCGCCCCTCTTCTGGAAGCCGTATATCTACGTGGGCTACCGGCCGCTGCATCGGACCTGGCGCTTCTACTTCCGCACGCTGTTCCAGCAGCACAACGAGGCGGTGAACGTCTGGACCCACCTGCTGGCCGCCCTGGTGCTGCTGCTGCGGCTTGCCATCTTTGTGGGCACCGTGGACTTCTGGGGAGACCCACATGCCCTGCCCCTCTTCATCATCGTCCTCGCCTCCTTCACCTACCTCTCCCTCAGTGCCTTGGCTCACCTCCTGCAGGCCAAGTCCGAGTTCTGGCATTACAGCTTCTTCTTCCTGGACTATGTGGGTGTGGCCGTGTACCAGTTTGGCAGCGCCCTGGCACACTTCTACTATGCCATTGAGCCTGCCTGGCATGCCCAAGTGCAGACCATCTTCCTGCCCACGGCTGCCTTTCTTGCTTGGCTTTCCTGCACTGGCTCCTGCTACAACAAGTACATCCAGAAGCCTGGCCTGCTGGGCCGCACTTGCCAGGAGGTACCCTCCGCGCTGGCCTACGCACTGGACATCAGCCCCGTGGCTCACCGCATCCTTGTGTCCCCCGACCCTGCCACAGATGACCCGGCTCTTCTCTACCACAAATGCCAGGTGGTCTTCTTTCTGTTGGCTGCGGCTTTCTTCTCTGCCTTCATGCCTGAGCGCTGGTTCCCTGGCTGCTGCCATGTCTTCGGGCAGGGCCACCAGCTCTTCCATGTCTTTTTGGTACTGTGCACGCTGGCCCAGCTGGAGGCCGTGGCGCTGGACTATGAGGCCCGGCGGTCCATCTATGAGCCTCTACACACCCGCTGGCCCCACAACTTCTCTGGCCTCTTCTTGCTCACAGTAGGCAGCAGCATCCTCACTGCATTCCTCCTGAGCCAGCTGGTACGGCGCAAACTTGATCTTCATCGGAAGACTCAGTGAAGGGGGTGGCAGCTGGTAGGGAGGGAAGTATAGTGGGGGCCCAAAGGTCCGGATGGGAACAGATGGGAATAGATGGGAACTTTGGCTCAAGGTGGGAACAAGTCCTGGTAAAGGTGTTTTTGTCTGGCCCGCGGTGATTCTCTGTGCATTCCTCGGCTGCCAAGGGCAGCACTGGCCAGTCCTTGGATTGAGGATTGGCTGGAGCTGCTGGGGTCTACTCTTGGGCCTGCCCCAGCTGCCTGCCCTGGGAGAGGGAAAGAGAAAGAGAAAGATGTGGGCCACCCTGGTTTTGCCTCCCCTCACTGCCTCTCTCACTTAGGGGTGAGGATGGGGGATCAGCTGGGGCCAAGACCCTGACTTGGGGCTTCCAGATTATCTGGGAGGGGGTGAAGTTGGGATTTAGGTTAGAGTCAGATCTGAGCTGAGGGACAGGGAAAGCATCAGCAGTGCCCTCTACCCAGATCCCCTTGGGAAAGGACAGCCCTCTGTTGTGTGCAGGACTTTAAGGTTCCTTGAACTCCAGCTTGGAGTTTGGGTGTTCCAGAGAACCCCCAAAGGTCAAAGATTGTGCCGGGTGGAAATGGATCCCATCCAGTGCCCCACAGCTCTCAGTCACTGTCCCAGTGAGCTCCACCCTCCTATCACTGGACTCTGTGTCCCACTCATCCTGTTCCCATCTTTCCTGGGTCCCTCATTCACAGCTCAGTGTTTATCCATTCAGTGTTTCTTGGGCCTCTACTCAGAGACAGGCTATTGATGGGGCCCTGTGGATTAATGCAGGATTAAAGGCTTTACTATCGAATGAACTGTCAGGGGAAACACTGAGGAGGGAATAATTAGTGCTGCCTGGGGCCCTCAGGATCTTGGGTTGAGAAGGGTGAATAGGAGTTTGCAGATGGAGAAGAGGAAATGTATTCCAGGCAGAGGGAAAAACCTGTTCAAAGGCCAAGAGGGATGGAAGGAGGAGTCACTGGAGCTGAAATCAGGGGTGGTCTGGACTCTGATGTCCTGGATGCAATAAAATGACTGTGCCAACAGTTGCTTCCTTCTTGTCTCCTATCCTGGAGAGAGGGCCCCGGTGCACCCCTTGGGCCTGCTCATTGTGTTGGAGGAGGTTTTCAGGGGGAGCTTGGGGGTGGGCAAAGGGAGGAGATCCTGTTTTATCTTTGCCTGGGGGTGGGCCTTATTTACTGTATATGGGAACTTTGTTTTGATAGGAAAGGTGAGGTAGTTTTATTACTAAATAAATATTAGACGTTAAAAGAATATGTTTAAAATATATAATTTGACAAATATTTCATTTCTTGGTCTTTTAATCAAGGAAGATCTTTATGTATTGCCTTTTCCCCAGTACATAAGCAATAAATGGCAATATATGTACAGTGAAGGAAAATTAGGAAGTACAGGTAAGAAAAGCAAAAAATCTTGAATGAATAAGGAATATCACTCCACTGCTAAAATATCCTGTCGTGCATATATTTTATCTGTGGAGATTGTGGTTATGTGTGCGAGCATTTTTATATTTCTGAGGACTTAGAACAATGCTAGGCACGTGTGTGTGTGTGTGTGTGTGCACGTGCTGCTCAGTCGTGTCCTACTCTTTGTGACCCCATGGACTGTACCCCACCAGGCTCCTCTGTCCATTGGATTTCCAGGCAAGAATACTGGACTGGGTTGCCATTTCTTTCTCCAGGGGATCTTCCTGACCCAGGGATTGAACCCCCATCTCTTGTGTCTCCTGCATTGGCAGGCAGGTTCTTTACCAACTGCACCAACTGGGAAGTCCAGGTGCATTTCTGAGG EMBV3_23244 GACTGTACAAAAGGAAGACTTGAAAGATCACGTGGATTCGTATTCCCACCCTTCCCCTCC Gene GeneID:515798|CORO1C:NM_001081590:165_cdna Constitutive 0 NULL GeneID:515798 17 GENE CORO1C MGC143403 coronin, actin binding protein, 1C EMBV3_37707 CACTCTGTGGATAGATTGTGACTTAACCCTGTTTGAATATGAGGGAAAGCTGTCACCTTC Gene GeneID:281935|MYO10:NM_174394:2_cdna Constitutive 0 NULL GeneID:281935 20 GENE MYO10 NULL myosin X EMBV3_36745 ATGAGACATTTACGGAAAAGATGCGCAGAAACACAGGAGTTCACTTCGCCACCCGGACCC Gene GeneID:100297528|LOC100297528:XM_002689699:155_cdna Constitutive 0 NULL GeneID:100297528 8 GENE LOC100297528 NULL hypothetical protein LOC100297528 EMBV3_28837 ATGGTGCTGGGGACTAGGGGAGGAAGTCAGGAGGTGGGAGGCTGTCTATGAACTCAAAGT Gene BVV0102_425448 + 1 EMBV3_30715 GK000019.2:19371103-19457480 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02725 TTTCTCTACCTGCAGTGCCCACCTCACTGCCATTCTCTGTGCCTATGGGCCTGTAATCTT Gene GeneID:100300434|LOC100300434:XM_002699117:170_cdna Constitutive 0 NULL GeneID:100300434 29 GENE LOC100300434 NULL similar to odorant receptor MOR83 EMBV3_18475 AGCTTCCAGGACCCTGTTCAGCTGCCAAATGTCAGGACCAGCCCAACAACGAACCGATCT Gene GeneID:100137897|LOC100137897:XM_002695663:142_cdna Constitutive 0 NULL GeneID:100137897 19 GENE LOC100137897 NULL similar to galectin-14 EMBV3_03381 GAACTCCCCAAAGGCAAGCACTATGCGGAAAATATTAACATTGACTAAGAAGTAGCCGAG Gene GeneID:408007|P2RY12:NM_001001174:14_cdna Constitutive 1 NULL GeneID:408007 1 GENE P2RY12 MGC139385 purinergic receptor P2Y, G-protein coupled, 12 EMBV3_06327 GCCCAGGTGATGCCAGGCTTTCGTGTGAAATGTGAAGCTGCCGTGTTGCCTTTTCTGTTA Gene GeneID:616131|LHFPL2:NM_001099151:48_cdna UTR3_Alt 2 NULL GeneID:616131 10 GENE LHFPL2 MGC157216 lipoma HMGIC fusion partner-like 2 EMBV3_33098 GGCTCCTCCAGTTTGTAAGCAGCCAAGTGATTTTAGTGTGTCTGGTGTTTGGGCAAGGAA Gene GeneID:505935|GLRX5:NM_001100303:181_cdna Constitutive 0 NULL GeneID:505935 21 GENE GLRX5 NULL glutaredoxin 5 EMBV3_28463 ACAAAGCACACAGAAACAACACATGCAAAGCACACGTAAGAGCGAAGCAGCAAACCCCGG Gene BVV0102_063329 + 0 NULL GK000008.2:83010445-83022521 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226042 TCONS_00226048 TCONS_00226046 TCONS_00226051 TCONS_00226037 TCONS_00226056 TCONS_00226045 TCONS_00226040 TCONS_00226038 TCONS_00226049 TCONS_00226039 TCONS_00226044 TCONS_00226041 TCONS_00226047 TCONS_00226050 1 XLOC_137909 Coding TCONS_00226050 XLOC_137909 NonCoding Coding C8H9orf3 8:82973421-83012248 j TSS169096 1375 2 TCONS_00226050_1 67 3 0.964662854788029 1.05027312976074e-24 5.16456215043523e-05 3.41661760429656e-32 1.0223716365221e-66 5.02953594981868e-09 0 8.63700461873536e-05 0.000198214519649917 5.01167941666134e-05 2.10361014435367e-07 6.86855600797966e-05 0.000147612848481785 7.38706235551678e-180 5.08390652845432e-40 9.98573297908969e-05 0.00956301850919949 0.00517394489332391 0.00419538722765151 0.000149428030407419 5.73627362223967e-35 8.48288533655068e-05 0.00111408271834265 0.00417692306603917 0.00223316453273167 9.08411617614284e-06 0.000474715712426847 0.000358873989361581 0.001624388506278 0.0010685105508537 0.00367243960664136 NM_001206980.1 C8H9orf3 Bos taurus chromosome 8 open reading frame, human C9orf3 (C8H9orf3), mRNA. 0.0 2093 100.00 0.842909090909091 XM_005252284.1 C9orf3 PREDICTED: Homo sapiens chromosome 9 open reading frame 3 (C9orf3), 3e-47 194 82.56 0.141090909090909 0 noncoding 0 0 0 0 -0.294991208565757 0.136765578562436 -0.110843628457083 0.215134735890245 GGACTCCGGGCTCCGGCCTGCGCCCCGACGGGAGCCTCAGTTCGCCATCGCTGGTGTGAACTCATTGTTAAGCACAAATACACAAAAGCGTACAGAGACGTGGAGAGGTTCCTTCAGGAGGATCAGGAAAGATCACAGCGAGAATCTTTTTCATGCATCTGCTCGTAGCCCCGGTGGGCCCAGGCTTGCATGGACCCTGGACATCAAAGGAAGAGCGATGGGGCTGCTGAAGCCGGCAGTCAGTGGCCGCCCACGCCTTGTGGGGTGACCTCCCCAAAGGGCCTCACCGCAGAGCTGGTGTCAAGAGGCGCACCCTCATCAGCAGTCTCCATGGGGCCGTGTGACGCCTTCGTGCCCATCCTGGATGAACCATCTCAAGATCCTGAATGTTAATTGAGTCTCCCCTTTGAGTTCAAGTCAGTTCTTCCATCCAAACATGGAAGGTCCCTGAGGCACATGGGAAAACCCACTGCACCTCCTCCACCCATCCCTCAGCATGTGGATCTGCATTTCTGCACTCCCGGAAAGCCAGAGCTTGTCTGCCAGGCCCAAGGAGCTGCTGCTCCCCACCTCCACAGAATTACATTGATTGATCTGTCCATTATTTAGATTTTCCAGAGTTTTAGTAACTTTCGGTAGAAGTGCAGGATAAGATTCTTTAAGATTTGTTGATAATGTAATGGATTCATGGGTTTTTTTTTCCTTTCTGTTTACTTCTGAATTTAATACTTAAAAAAAGAGAGAGAAAAGGGTGTAGTGTCCACATTCTTGTCTCCTTTTCTTACCTCCATGGTTCCTCTAGTGTTCACAGTGGTGCTGATACTCTGGGGGAGGGGGGCGCGTGCCTCCTGCGCGTGATAAAGGCATGTTGGGCACCGTGGGAACCTGTGGCGACGGTGCTCCTCTTTCCCACAAACGTTTGAAGTTAAGAATAGAAGCTAAGCTTCCCGGGATTGCCCAGAGGGAAGGGTGGCCTTAAAACACCTCAGAAGCCACCCTGGTTGGTGCAGCACGTGATGGATGCGTGCGGCTCAGCTGAGCGGGCATGGACCCGCCTGCCTGCACCAGTGGCGCCTCGGGCCAGCCTGGGGGCGATGGGCAGCTCAGCACAGCTCTTCATTAGAAGCTCCTGACCTCAGAATTAGGCACCAGTGACTTTCCGTTTTAGAAAGTCTCCCGGGGTTTGCTGCTTCGCTCTTACGTGTGCTTTGCATGTGTTGCTTCTGTGTGCTTTGTTTACCGTGTTGATATAATAAAAATCTGATTTTTGAATAAGTGTCAAAATGCTGTTCTTTGTGAATTAAATGACTCTCCCCCTGGTTGGTGTGTGTTGGCCCTCTGAGAGGCGAAGCAGCAAGCCCGGGGCACAGCCGGG EMBV3_23437 AAGGCAGAGAAGGCAACACCTCTTATTAAGCCCCAGATCAACCTAGAACCCACAACCGCA Gene GeneID:530348|LOC530348:XM_002696335:31_cdna Constitutive 0 NULL GeneID:530348 20 GENE LOC530348 NULL similar to mCG118705 EMBV3_17042 GGGGAATGGCATTGCACTGCTAGCTGGAAGGTCAAGAGGACAACGCTGGTGGACAGCAGA Variant GeneID:506509|SEH1L:NM_001103089:53_cdna 268^414 1 EMBV3_34320 GeneID:506509 24 GENE SEH1L MGC148556 SEH1-like (S. cerevisiae) EMBV3_00508 ACCATGAGGCATTTATTGCTTTCTTATCTGCAAGATCACATTAGTGACTAGTGGCAATGA Gene BVV0102_233228 + 0 NULL GK000015.2:73577445-73715018 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08134 ATTCCCACAAGAGTGAGGATAAGGTTAAGTACCAATTCTGCCTACGGTGGCCGTGAAGTG Gene GeneID:535601|SLC3A1:NM_001034633:146_cdna Constitutive 0 NULL GeneID:535601 11 GENE SLC3A1 MGC128143 solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1 EMBV3_09977 TTTATCAGATTGCATACTCCTAGAGTCTAGGTGCAAGACCAGTGTAGTCTTACGGAGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38281 AACAGGGAAATGGATTGCGCGCTTCAGGAAGAATAGCTTGGGTGATGACTGCTCTTGCTG Gene GeneID:520335|OXA1L:NM_001035335:170_cdna Constitutive 0 NULL GeneID:520335 10 GENE OXA1L MGC127460 oxidase (cytochrome c) assembly 1-like EMBV3_33863 TGGAGGTCCCCATAGGACACCTCAGGCAGACCTTCTAGCTGCCAGATCTACAGCCTTTAA Gene GeneID:100125238|ERCC2:NM_001103317:5_cdna Constitutive 0 NULL GeneID:100125238 18 GENE ERCC2 MGC166093 excision repair cross-complementing rodent repair deficiency, complementation group 2 EMBV3_18794 TGATGCACGGATGCTTTTTGAACAGTAGAGCGAAATGCTAGACATGGAGAATCTGCTCTG Gene GeneID:613845|LOC613845:XM_002691124:68_cdna Constitutive 0 NULL GeneID:613845 10 GENE LOC613845 NULL similar to chromosome 14 open reading frame 4 EMBV3_08722 AACTGGAGGCTCATTTCTGCCTTTCCTGCCATATCCGGCCGATGGTCACATTTCAAGTCT Gene GeneID:537418|TOP3B:XM_002694700:311_cdna Constitutive 0 NULL GeneID:537418 17 GENE TOP3B NULL topoisomerase (DNA) III beta EMBV3_03708 GAACGAGCACCTGCAGTACATCATCACCTGTTCCTAAGTTGGACTCCTGGTGTGTGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32538 TCCGACTCCCTGGTGGTGTGTGAGGTAGACCCAGAGCTAAAGGAAAAGCTGAGGAAATTC Gene GeneID:514407|GMFG:NM_001024537:616_cdna Constitutive 0 NULL GeneID:514407 18 GENE GMFG NULL glia maturation factor, gamma EMBV3_27806 ACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATATAATGCGTTCTTGGCTCTTCCAGC Gene GeneID:617454|PKNOX2:NM_001144108:47_cdna Constitutive 0 NULL GeneID:617454 29 GENE PKNOX2 NULL Pbx/knotted 1 homeobox 2 EMBV3_27187 GCGTCTCGTTTAAATTGCGGGAAAGTCAAAGTGGAACCTTGGAGCCTAAAAACCAGCCCC Gene GeneID:615490|SMOC2:NM_001098134:2_cdna Constitutive 0 NULL GeneID:615490 9 GENE SMOC2 MGC148871 SPARC related modular calcium binding 2 EMBV3_14123 AGCATTTCTAGGTGCAGCAAAGGACCTGCAATCCTGTAAGTCACCCCACAGCTCACAGGC Gene GeneID:513343|TMPRSS4:NM_001101973:65_cdna Constitutive 1 NULL GeneID:513343 15 GENE TMPRSS4 MGC159370 transmembrane protease, serine 4 EMBV3_28872 GGAGCTGCTTATGTTTGTGCCAATGCTGTAGAAAGTACCATGAATAGACTGGTGGCAGAG Gene GeneID:280825|IL5:NM_173922:13_cdna Constitutive 0 NULL GeneID:280825 7 GENE IL5 NULL interleukin 5 (colony-stimulating factor, eosinophil) EMBV3_05169 GGAGTATAACCAACTAACAATGTTGTGGTAGTTTCAAGTGAACAGTGAGGAGATTCAGCC Gene BVT0101_031658 + 1 EMBV3_22578 GK000004.2:73414183-74560693 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15332 ACTGTTGAGTTCAGCATGGACAACATCGCAGCCCTGCAGCACAAGGGCTTCACCATTGAG Gene GeneID:617386|LOC617386:XM_002694182:639_cdna Constitutive 0 NULL GeneID:617386 16 GENE LOC617386 NULL similar to hCG1647286 EMBV3_39131 GGTCCAAAATAATCCTACCTTACACATGTTCAGCAGCAAAGTTAACAGAAACTGGCCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16722 TGAAAGACGATGAGTTGAGCCGTCAGGCACCTATTGGAGGCGATTTCCCAGCAGTTCAGA Gene BVT0102_031161 + 0 NULL GK000030.2:117098832-117442265 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245528 TCONS_00245530 TCONS_00245533 TCONS_00245529 TCONS_00245531 1 XLOC_150750 Coding TCONS_00245528 XLOC_150750 Coding Coding LOC537655 X:116871751-117356974 j TSS184291 2117 1 TCONS_00245528_2 655 0.028814359943316 13 0.995663840468899 0.00152351169606336 0.000545600215304188 0.00220887761492324 0.001256040892818 0.00203172877884615 0.000488430326251172 0.000928558430318869 0.0022403334620315 5.11305789156887e-08 4.85600168238118e-06 7.03108969410825e-09 2.21679075749301e-11 0.00046766251127626 0.000613893750397113 1.73639090994335e-06 0 5.5001493933568e-206 0 0.00464551438057229 0.0038266730101906 4.61211013151533e-35 0 0 0 0.00379116733463446 0.00593383289601668 0.00196263895565823 5.71189338247439e-07 3.70185076399618e-05 1.59465840716404e-16 XM_005200802.1 LOC101909514 PREDICTED: Bos taurus dystrophin-like (LOC101909514), transcript 0.0 3344 99.95 0.876712328767123 NM_004010.3 DMD Homo sapiens dystrophin (DMD), transcript variant Dp427p2, mRNA. 0.0 2755 92.94 0.875767595654228 TCONS_00245528_2 sp|P11532|DMD_HUMAN DMD_HUMAN Dystrophin; 0.0 1206 94.73 0.954198473282443 1 coding 0 0 0 0 -0.0669346801841068 0.667039527870834 -0.0253962077223402 0.686551179789645 CCCACCTGCAGTCAATTCCCCTTCCTCTTGGAAGCAAGCCTACCAGCCACCATGTTCTGCCCAACCTGCAGTCCACTGCGCTCACTGGGGTGTCACGCCAGGGCCTTGCTGCAGACATCTCCTAGTCAGACGGTTGCTCTGGTGACACAACCTGTGGTTGCCAAGGAAACCGCTGTCTCCAAACTAGAAATGCCATCTTCCTTGCTGTTGGAGGTCCCTGCACTGGCAGATTTCAACCGGGCTTGGACAGAACTTACCGACTGGCTGTCTCTGCTTGATCGAGTTCTGAAAGCACAGAGGGTGATGGTGGGTGATCTTGAAGACATCAACGAGATGATCATCAAGCAGAAGGCAACACTGCAGGACTTGGAGCAGAGGCGCCCCCAGTTGGAAGAACTCATTACTGCTGCCCAGAATTTGAAAAACAAGACCAGCAATCAAGAGGCCAGGACCATCATTACTGATCGAATTGAAAGAATTCAGAGTCAGTGGGATGAAGTACAGGAACACCTTCAGAACCGGAGGCAGCAGTTAAATGAAATGTTAAAGGATTCAACACAATGGCTGGAAGCTAAGGAAGAAGCTGAGCAGGTGGTGGGGCAGGCCAGAGCCAAGCTTGAGACATGGAAGGAGGGTCCCTACACAATGGATGCAATCCAAAGGAAGATCACAGAAACCAAGCAGTTGGCCAAAGACCTCCGCCAGTGGCAGATAAATGTAGATGTGGCAAATGACTTGGCACTGAAACTTCTCCGGGATTATTCTGCAGATGATACCCGAAAGGTACACATGATAACAGAGAACATCAATGCCTCTTGGGCAAGCATTCATAAAAGAGTGAGTGAGCGAGAGACTGCTCTGGAAGAAACTCATAGATTACTGCAACAGTTCCCCCTGGACTTGGAGAAGTTTCTTGCCTGGCTTACAGAAGCTGAAACAACTGCCAACGTCCTGCAGGATGCCACCCATAAGGAAAGGCTTCTAGAAGACTCCAAGGGAGTAAGAGAGCTGATGAAACAATGGCAGGACCTCCAAGGAGAAATTGAAGCTCACACAGATATCTATCACAACCTAGATGAAAATGGCCAAAAAATCCTGAGATCCCTGGAAGGTTCTGATGACGCGGTCCTATTACAAAGACGTTTGGATAATATGAATTTCAAGTGGAGTGAGCTGCGGAAAAAGTCTCTCAATATCAGGTCCCATTTGGAAGCCAGTTCTGACCAGTGGAAGCGTCTGCACCTTTCTCTTCAGGAACTTCTGGTGTGGCTACAGCTGAAAGACGATGAGTTGAGCCGTCAGGCACCTATTGGAGGCGATTTCCCAGCAGTTCAGAAGCAGAATGATATACACAGGGCCTTCAAGAGGGAACTGAAAACGAAAGAACCTGTAATCATGAGTACTCTTGAGACTGTACGAATATTTCTGACAGAGCAGCCTTTGGAAGGACTAGAGAAACTCTACCAGGAGCCCAGAGAGCTGCCGCCTGAGGAGAAAGCCCAGAATGTCACACGACTCCTACGAAAGCAGGCTGAGGAGGTCAACACAGAGTGGGAAAAATTGAACCTACACTCGGCTGACTGGCAGAGAAAAATAGACGAGGCCCTCGAAAGACTCCAAGAACTGCAGGAGGCCACGGACGAGCTGGACCTCAAACTGCGCCAAGCTGAGGTGATCAAGGGATCATGGCAGCCCGTGGGCGATCTTCTCATTGACTCCCTCCAGGATCACCTCGAGAAAGTCAAGGCACTTCGAGGAGAAATTGCACCTCTCAAAGAGAATGTAAGCCACGTCAGTGACCTTGCTCGCCAACTCACCACGTTGGGCATTCAGCTTTCACCATATAATCTCAGCACTCTGGAAGACCTGAACACCAGATGGAAGCTTCTGCAGGTGGCTGTTGAGGACCGCATCAGGCAGCTGCATGAAGCCCACAGGGACTTTGGCCCAGCGTCCCAGCACTTCCTTTCCAATGTTTTTCATGGATCTAATCTGAAAGTACAGTGTTTTGCTTATTAGAAGAACTCAACAGTTACTTGTGTAACTAATGAAGGACTGTGAAGAAGGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTATTGGAGAAGACTC EMBV3_36117 GTTGAGAGAGGGTATATGGAGTTAACAGGTTTTGTGTTTCTTGGCAGGAGGGAAAAGGTG Gene BVV0102_024551 + 0 NULL GK000012.2:19596429-20351845 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07329 ACCAGATACGAACTACGGCCGGTTGGTGCTGCGGCGCTAATGCAAACGTAGTAGAGGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33790 CAATGCAGAGCTCCTGCGCTATTCCGAGAGGGCACAGTGAATAAAGTGTCCTCGAGCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06662 ATAAAACCACCTGGAGGTCCCCTCAGCTTGTCCTCAGAGTCCCTGTCATGCCTGTAGAAT Gene GeneID:100141142|SYCE2:XM_002688757:59_cdna UTR3_Alt 2 NULL GeneID:100141142 7 GENE SYCE2 NULL synaptonemal complex central element protein 2 EMBV3_11939 GCTGTCAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGGAGC Gene GeneID:510322|PRPF3:NM_001046051:79_cdna Constitutive 0 NULL GeneID:510322 3 GENE PRPF3 MGC137653 PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae) EMBV3_15398 AAGTGGAGACTTCGGGGTGGCAGGAAGGACAGGGTAGGTAGGCTGACGTGGTGGAATAAA Gene BVV0102_057079 + 0 NULL GK000004.2:112872298-112989510 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185328 1 XLOC_111555 Coding TCONS_00185328 XLOC_111555 Coding Coding PDIA4 4:112989068-113006466 j TSS137804 2467 1 TCONS_00185328_3 643 11 0.858826234408231 0.00621087076727821 0.00198455975970336 0.00415430322216422 0.0030484576713198 0.0021919050829805 0.000463344954816254 0.000510272057763544 0.00191588219679382 0.00119033694120433 0.000249518594859037 0.000142576167938009 3.57560904354569e-05 0.000463596013803997 0.00141590371495813 0.000573173904331355 0.0101189204092068 0.00178806648723766 0.000548396768738217 0.00131970811804956 0.00304202361739731 0.00057048309062997 0.00162689297691208 0.00182035681544462 0.00259531549339453 0.00541998327134517 0.000504571624412474 0.000841843505831679 0.000447738338780835 0.00024556913552889 0.000922772395078979 NM_001045879.2 PDIA4 Bos taurus protein disulfide isomerase family A, member 4 (PDIA4), 0.0 3822 99.91 0.860559383867045 NM_004911.4 PDIA4 Homo sapiens protein disulfide isomerase family A, member 4 (PDIA4), mRNA. 0.0 2322 85.75 0.812728009728415 TCONS_00185328_3 sp|Q29RV1|PDIA4_BOVIN PDIA4_BOVIN Protein disulfide-isomerase A4; 0.0 1307 99.69 0.998444790046656 9 coding 0 0 0 0 -0.411718184286779 0.151257285770223 -0.00500555573396692 0.931260567639142 GAGGTTCGGGAGCGCCCAGTGGCCGCTCGTGCAAGGAGGCCACGCTCAGCACCACCGCGATGAGGCCCCGGAAAGCCTGGATGCTCGTCCTGCTCCTGGCCCTGGTGCAGCTGCTGGCCGTGGCGAGCGCCGGGGCCCCGGACGAAGATTCTTCTGACAAAGAGGATGCCATCGAGGAGGACGAGGAGGAGGACGAGGATGACGACGACGACGACGATGACTTGGAAGTTAAGGAGGAAAACGGCGTCTTGATCCTGAACGATGCGAACTTCGATAACTTTGTGGCCGACAAAGACACGGTGCTGCTGGAGTTCTACGCTCCGTGGTGCGGGCACTGCAAACAGTTTGCTCCAGAATACGAAAAAATCGCCGCCACCTTGAAGGAGAACGACCCTCCCATCCCTGTCGCCAAGATCGACGCGACCTCAGAGTCGGCGCTGGCCAGCAGGTTTGACGTGAGTGGCTACCCCACCATCAAGATCCTGAAGAAGGGCCAGGAGGTTGACTACGAGGGCTCCAGGACCCAGGAAGAAATTGTGGCCAAGGTCAAAGAGGTCTCCCAGCCGAACTGGACGCCTCCACCAGAAGTCACACTTGTGCTGACCAAGGACAACTTCGATGAAGTGGTGAATGATGCCGACATCATCCTGGTAGAGTTTTATGCTCCCTGGTGTGGACACTGCAAGAAACTGGCCCCCGAGTATGAAAAGGCCGCCAAAGAGCTGAGTAAGAGCTCTCCCCCGATCCCCCTGGCGAAGGTTGACGCCATAGCGGAGACAGACCTCGCCAAGAGGTTCGACGTCTCCAGCTACCCCACCCTGAAGATCTTCCGCAAGGGGAAGGCTTTCAGTTACAACGGCCCACGGGAAAAATACGGGATTGTCGACTACATGATGGAGCAGTCCGGGCCGCCCTCCAAGCAGATCCTGGCCCTCAAGCAGGTCCAGGAGTTCCTGAAGGACGGGGACGATGTCATCATCATCGGAGTCTTTAAGTCGGAGAGTGACCCTGCCTACCAGCTGTACCAGGATGCGGCTAACAGCCTGAGAGAGGATTACAAATTCCACCACACTTTCAGCACTGAAATAGCAAAGTTCTTGAAGGTCTCTCTGGGGAAGTTGGTCGTCATGCAGCCTGAGAAATTCCAGTCCAAATATGAGCCCAAGAGCTACGTGATGGACATCAAGGACTCCACGGAGGCCGCAGCCATCACGGAGCACGTGGTGAAGCACACGCTGCCCCTGGTTGGCCACCGCAAGGCTGCTGATGCCAAGCGGTACACGCGGCGTCCCCTGGTGGTCGTCTACTACAGCGTGGACTTCAGCTTCGACTACCGCGCGGCCACTCAGTTCTGGCGGAACAAGGTCCTGGAGGTGGCCAAGGACTTCCCCGAGTACACCTTCGCCGTGGCCGATGAGGAGGACTTCGCCACGGAGTTGAAGGACCTGGGGCTAAGCGAGAGCGGGGAGGAGGTGAACGCGGCCATCCTGGATGAGGGCGGCCGCAGGTTTGCCATGGAGCCCGATGACTTCGACGCCGACGCCCTGCGCGACTTCGTCACCGCCTTCAAGAAAGGAAAACTGAAGCCAGTCATCAAATCCCAGCCGGTGCCCAAGAACAACAAGGGGCCGGTCAAGGTCGTGGTGGGGAAGACCTTTGACTCCATCGTGATGGACCCTAAGAAGGACGTCCTCATCGAGTTCTACGCGCCCTGGTGCGGGCACTGCAAGCAGCTGGAGCCGGTGTACACCTCCCTGGGCAAGAAGTACAAGGGCCACAAGAACCTGGTCATCGCCAAGATGGACGCCACGGCCAACGACGTCACCAGCGACCGCTACAAAGTCGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGAACCCAATTAAATTTGAGGACGGAAACAGAGACCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAACTGAGCAGAACCAAGGAAGAACTTTGAAGGCCGTGGGGGTCTGCAGAGGGCGAGTGCGGGAGGGACCGGACCCAGCGAAGCTTCCAGTGGTCACTGGCGGGGCCCATGCCAGCTGCGAGCCTGGTGGGCTTGCTCACAGGCAGTATCTCAAAGTGTTTTGTGAGAATGGTCACCAGGCGCCCTGCCAAGGACGTGATTTCGGCCCGACTCTGAGCCGCCGCCAGACCGGGAGAAGCAGCATCTCTGCAGGCGTGGACATCACCGTGCCTTCTCCTCCCAGACCGAGGACCGCGGGCAGGAGCCTGTTGCAGGTGCCCCCAGACCCCTGAAGCCAGGTCCTGAGGCTCAGCCTCCGAGAGGTCACCCTGCCAAGGCTAGCAGCACCGCCTTCAGAACCGCCGTGGCCGAGGCGAGATGAGCCAGGGCCCAAGTGGAGACTTCGGGGTGGCAGGAAGGACAGGGTAGGTAGGCTGACGTGGTGGAATAAAAAAATGATTGAAGAC EMBV3_17221 GCTCCTGCAGTGAAAGCGAAGAGTCCCAAACACTGGACCGCCGAGGAATTACCAAAATCT Gene BVV0101_046158 + 0 NULL GK000023.2:15714373-15803545 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134218 TCONS_00134219 1 XLOC_081339 Coding TCONS_00134219 XLOC_081339 NonCoding Coding - 23:15721582-15730432 - TSS100101 534 1 TCONS_00134219_2 68 0.340823970037453 3 0.939993219572833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000390362073947401 0 0 0 0 0.000127775804785138 0.00125734291353219 0 0 0 0.000374912509629649 0.000241491922086142 2.14310421661981e-22 XM_005223491.1 CCND3 PREDICTED: Bos taurus cyclin D3 (CCND3), transcript variant X3, 3e-30 136 100.00 0.138576779026217 0 noncoding GCTGGAGGCAGAGTGGAGGGACCACATTCCAGAGATGGCTGGAAGAAGAGGTAACAGGATCGGCTTGTAGGTTGATGTGGAGCCTGAGCCAGAGGAGCTGAGAAAGAATACTGTCCACGTTTCATCCACGTGGTGAAACAGTGGATCGTGGTTCACTGAGGACAGGTTTTGAGCATCTTGTGCTTGAGGCGTCTCTGTGACATCAGGTTTTGGACTTTTGGCCCTGAGGCATGTGGCATCTTAGCTCCCCAACCAGGAATCAAACCAGCACCCCCTGCATTGGAAGACCCCGGGGCATATGGGATCTTATTTCCCCCAAGCAGGGATCAAACCCACGGCTCCTGCAGTGAAAGCGAAGAGTCCTAAACACTGGACCGCCGAGGAATTACCAAAATCTGCTGTTTTCTTCCTCTTCCATGAATTCCCAGTTGTCTGTCATTCACATGGTGCCCTCACAACCGCCACATCCTACTTCATATTTTCAAAATTAATAGTTTTTCATTAAATAAATGTATCTTAAAAGGAAGCTTGATA TCONS_00134213 s 3' 2697 TCONS_00134213 TCONS_00134214 s 5' 0 EMBV3_00113 CATGATCGACTTTGCACACAGCACGTTCAAGGGCTTCCGAGATGACCCCACAGTGCATGA Gene GeneID:534029|IP6K1:NM_001076010:232_cdna Constitutive 0 NULL GeneID:534029 22 GENE IP6K1 IHPK1 MGC152001 inositol hexakisphosphate kinase 1 EMBV3_06138 AAGGAGAAGGGTGTGGGCACTCTGCATTTAAAACCTACAGCGAATCAGAAGACGCAGCTG Gene GeneID:506836|NUP50:NM_001038048:3_cdna Constitutive 0 NULL GeneID:506836 5 GENE NUP50 MGC134469 nucleoporin 50kDa EMBV3_30179 GAGCTCTGGCAGCCTTCCTCAAAAAGTCCGGGAAGCTGAAAGTCCTTGAATGGGTGGACA Gene GeneID:524507|LOC524507:XM_002690123:149_cdna Constitutive 0 NULL GeneID:524507 9 GENE LOC524507 NULL similar to ribosomal protein S19 EMBV3_17980 AACATGTACTCAAAAGGAAAATAAAGACATGTTACAGCTCCGCAGCTTTATAACAGGCTG Gene BVV0102_035421 + 0 NULL GK000011.2:70646315-70659472 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028231 TCONS_00028232 TCONS_00028234 TCONS_00028229 TCONS_00028230 TCONS_00028233 TCONS_00028228 1 XLOC_015435 Coding TCONS_00028230 XLOC_015435 Coding Coding CLIP4 11:70654404-70717958 j TSS19859 4356 1 TCONS_00028230_2 494 16 0.931710540808459 0.000649269912465496 0.000496650318001977 0.000650087575358841 0.000828306536998927 0.000132270654222806 0.000192949275308778 0.00101098382145868 0.000323092164172888 0.000356187704962499 0.00139026843213115 2.26942526106491e-05 3.53682496188099e-17 0.000182345878187095 4.36860402990681e-12 2.23901820772319e-09 2.69803787281743e-09 0 1.06733446320167e-27 0.00119089993175924 0.00224616654546532 1.09236104316243e-40 1.33098377855096e-37 3.75918738311181e-40 3.5211735398983e-09 0.000876736450081108 0.00143674173649162 0.00028464908463073 8.41434596895561e-05 3.5031979157797e-05 5.4420045870991e-05 XM_005212977.1 CLIP4 PREDICTED: Bos taurus CAP-GLY domain containing linker protein family, member 4 (CLIP4), transcript variant X1, mRNA. 0.0 7613 98.62 0.999770431588613 XR_244959.1 CLIP4 PREDICTED: Homo sapiens CAP-GLY domain containing linker protein family, member 4 (CLIP4), transcript variant X6, misc_RNA. 0.0 4060 82.20 0.932506887052342 TCONS_00028230_2 sp|Q8N3C7|CLIP4_HUMAN CLIP4_HUMAN CAP-Gly domain-containing linker protein 4; 0.0 867 91.24 0.94331983805668 6 coding 0 0 0 0 0.204000404265158 0.208448496335002 0.00941389934431043 0.922062357730643 CCCGCGGTCGGCTACCGGAGACAGGCACTCGGGTGGAGAAGCGCGCCTCTTGGCCTTCTCTCCGCGCCCCTGCGTTCCCGTCGGCCGCCCGGAGAGGACCGGAGGAGGCAGGTGGCTTTCTAGAAGATGACCATAGAGGACCTTCCAGATTTTCCATTAGAAGGAAGTTCTTTGATTGGAAAATACCCATTTTTATTTCAAGGTTCTGATACACCAGTTATCTTTTCCATTTCTGCAGCACCAATGCCTTCAGACTGTGAGTTTTCTTTCTTTGATCCTAATGATACATCATGCCAGGAAATTCTCTTTGATCCCAAAACTTCTGTATCAGAATTATTTGCCATTTTAAGACAGTGGGTTCCTCAGGTCCAGCAAAACATTGACGTTATCGGAAATGAGATTCTTAAGAGAGGTTGCAATGTGAATGACAGAGATGGATTGACAGATATGACTCTTTTGCATTACACATGCAAATCTGGAGCTCACGGTATTGGTGATGTTGATACAGCGGTAAAATTTGCAACTCAGCTTATTGATCTGGGAGCAGATGTTAGTTTGCGGAGTCGATGGACAAACATGAATGCCTTGCATTATGCAGCTTATTTTGATGTTCCTGAGCTTATAAGAGTGATTTTGAAGACATCTAAACCAAAAGATGTGGATGCCACTTGCAGTGACTTTAATTTTGGAACAGCTCTGCATATCGCTGCATATAACTTGTGTGCAGGCACTGTGAAATGCTTATTGGAGCATGGAGCAAATCCTGCATTTAGGAATGACAAAGGGCAGATCCCCGCTGACGTTGTTCCAGACCCGGTTGAGATGCCCTTGGAAATGGCTGATGCTGCGGCCACTGCTAAGGAAATCAAGCAGATGCTGCTGGACGCAGCGCCTCTGTCATATGATCTCTCAAAGCCCTTGCTTCCAAATTACGATCGTGTTACTAGCAAGGCGATGCTGACGTCACTTGGCCTGAAGCTAGGGGATCGTGTTGTTATTGCAGGACAGAAGGTTGGAACATTGAGATTTTGTGGAACAACTGAATTTGCAAGCGGACAGTGGGCTGGCATTGAGTTGGATGAACCAGAAGGAAAAAACAATGGAAGTGTTGGGAAAGTCCAGTATTTTAAATGTGCCCCCAAATATGGTATTTTTGCACCTCTTTCAAAGATAAGTAAAGCAAAAGATCGAAGGAAGAATATAGCACACACTCCTTCTACAAAAGCTGGACCTCTCATCAGGTCCCAGAAAATTGATGTAGCTCATGTAACATCAAAAGTAAATACTGGATTAATGACATCAAAAAAAGATAGTGCTTCAGAATCAACACTCTCATTGCCTCCTGGTGAAGAGTTGAAAACTGGGGCAGAGAAAGATGTTCCCCTGATTGGATCCATCAGCAGCTCCTCCTCTATATCTTCTTTGGAGCACAAACAGAGCCTCTCCAAGAAACTGAATGCACGTGGCAATAACAAGAAGACAATGAGCAAAAGCCCTTCTCTCTCGTCTAGAGCCAGTGCTGGTATCTATGGCTTTTTCAACCAGGCTTTCTTGGTGTTTTTTATCTTGGTTTGTTTGTTTGAATTCCTCAGCAGCATCTGTAGCAAATAGTGGGCGCTGCGAAGGAGACCTCCGAATTGGAGACAGGGTGTTGGTGGCAGGCCAGAGAATTGGTGCCATTAAGTTCTTTGGGACAACAAACTTCGCTCCAGGATATTGGTACGGGATAGAGCTTGAGAAACCCCATGGCAAGAATGATGGTTCAGTTGGAGGTGTGCAGTATTTTAGTTGTTCCCCAAGATATGGAATATTTGCTCCCCCATCCAGGGTTCAAAGGGTAACAGATTCCCTGGATACTCTTTCAGAAATTTCTTCAAATAAACAGAATCATTCTTATCCTGGTTTTAGGAGAAGTTTCAGTACAACTTCTGCTTCTTCCCAAAAAGAGATTAACAGAAGAAATGCTTTTGCCAAGTCAAAGCCCACCCTGCACCGCAGCTGGAGCAGCAGCTCGACGGCCGGCGGCCTGGAGGGTAGCGTGAAGCTGCACGAGGGCTCCCAGGTCCTCCTCACCAGCTCCAACGAGATGGCCACCGTGAGGTACGTGGGCCCCACCGACTTCGCCTCAGGGATCTGGCTGGGCCTGGAGCTTCGAAGCCCCAAGGGAAAGAATGACGGGGCAGTGGGAGACAAACGCTACTTCACCTGCAAGCCCAACCACGGGGTCCTCGTGAGGCCCAGCAGAGTGACCTACCGGGGAATAAACGGGTCCAAGCTGGTGGATGAGAATTGTTGAGTTAGGCTTCTACATTGTTAAAATAAATGAGCTTACACACACAGACACACACACACACACACACACACACACACAAAGTCCATGACTAGTGGTTTACTTCACTTAGCCATTATTTAAAATTTGAAAATACAACTATCTTCATATAGACCATTATAACAATTCAGAGAGACCCCTTTAAAAAGCTTGAAATATGAACTGTAGGAATCATGGGTCTCTTAAAACAATATAAAACCAAGATTTTTTTTAAAAGCTTTTAAAGCTTTAGACCCAAGAAAATTCTTAAACTTGGGGAAAATGTGCCATGAGGTGACTGGCTGCTTTTGCGTCTCATTTTTGCACAGAAGAGTGGATTTTCCATGTACCATCATTGTGCAGGTTTTCACTAGCTTTGGTTAATGTTAAGACGTTCATGTGACCTTGTCTGGAGTTTTTCTTTCTTTCTGTACCATTGAGGACAAGGCGAGAGCAGCTGCATGATGTGCGTTTTTCTTGTCTTTGGGTTTCGTTATTTGCCCTTCTGGGAATGTCCCACCTACAGACACTTTAGAGCTGTGGGGGTAGATGGGCCCCCGGGGCTCTGGAGCTCAACCTCTGCTGCTGCGGGGTTCTGAAGCTGCTCTTCCTCACCTGGGTCATGAGCTAGCTGGTCACCAGACCGTCCAGCTAGAATGCAGGTCTCCCACCTGTGGCCTGGGCCCTTGCTGCTGCCCAGTGCGTCATCTCAGACCGTTCTTCTGTTGGTGACTGCCTCATCTGGAGGAGCTCCAAAATCCCATGATTAGGGTCATGAATTCAAGTCACAATTGGAACTATTTGCACATATTTAACTTCCTTATTAGACATATCTATAAAACACACACACGCGAAGCACTTTGAAAATAAAACATGATGCACTTTCCTCTGTGGAGAATTTGCCACCATTTCCTCTGGGGATGAAAAATATTAAAAAAAAGTATATTTAAGACAGAGCAAATTAAGATATGTTAAGAAGAATGTAGTAGCTATTCATTTAAATGGTTATGGTCTTCGGTGTTTTATTATTCATAAGATTGGTGTTGCCTTTGCTGTTGCTGCTGGTTTCATGTTTTCAATTGTTGCAGAATTCAGCCTGTTATAAAGCTGCGGAGCTGTAACATGTCTTTATTTTCCTTTTGAGTACATGTTAACAAACTAAGCTTCATGATAGAGTGATATAATAATGCAAAACATTTGTGTTGTGGATATGTATTGAAGTTTGTCCTATATGTACAAAGATTTATCTTTTATCATAGATATTCAGACTCTAAACTACCACAGAAATATCAGAGCAGTTTGCTTTATAAGATAAAAAGCATCCTTCAAAATGGAGCTTGCTTTGTGCTTTAGAAAGAATACATTGAACTATTTTGCAATATACTGTTTAAAATCTAAATTCTGTTGCTTTGCTGCCTTTTTTAAAAAAGTATGAAATTACAAATATTGCTAGAGCTATTTTCCTGAAATACATTTGCAAAGTAAGGCTGCTTTATAATCAAGGAATATTTTTGATTGAAGAAAGTGACTGTACTATGATTCAAAAGTAAACTTATTTTATTATATAGTTTATTTCTTAAAAACTCTATTTATATCTTACCATGAAATCCATGACTACACTGAACTTGGGTGTCCATAATTCTTCCTCTTAAATGGAAAACCCTATAAGTTAGTAACAGTAATGTCAACACTGAATTTATTTTGAGGTTAGAGAACCAGTTGTTCTCATATTTAGATTAGGATTATTAAATCCATGTAATGTGTATGTTTACATATACTATACATAAAAATTAGGTGTTTTCATTTGTGTTTTGCTTCTGTCATTCAAAGTTCCCATCTTGAACATTAATAAAAAGGGAAGCTGGTTTGGAGTGGCATGTTGTCATTGACCCTGCCTGCAGTACCTTTTCTCAGATACTCAGATTACATATGCTTTGTGTTTAATTTTTTTTCTTCTTACAGTAATGACTTGGATTTGTCCTATACCTATTGAGAGTCTTAAAAAGTGCCATGCTTCTACTCAGCAAATAAGGTTATGTTTTCAGCTA EMBV3_10158 TTCAAACACACCTGCTGAGTGTCTGCTCCAGTTCTGTACAGAGTATCCCACCTGGAGAGG Gene BVV0101_021753 + 0 NULL GK000012.2:32733099-32842321 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20045 ACATGTCTTGGCTCTACACCTTCCGCGAGAAGTTTCCGGGCAAGCTCTGCTCCTACTTCA Gene GeneID:516886|TRIM62:XM_002685606:245_cdna Constitutive 0 NULL GeneID:516886 2 GENE TRIM62 NULL tripartite motif-containing 62 EMBV3_02910 TGTTCATGGTTACTTGTTCTCCCCCTTGTTCCTAAAATCCACCCCCATTCCACCCTAGCC Gene BVT0101_041932 + 0 NULL GK000022.2:16139098-16247928 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128067 TCONS_00128068 TCONS_00128065 TCONS_00128066 1 XLOC_077817 NonCoding TCONS_00128068 XLOC_077817 NonCoding NonCoding - 22:16210158-16220193 - TSS95654 3040 1 TCONS_00128068_4 99 0.450328947368421 4 0.697428742276261 0.0028623562230277 0.000133494529940435 0.00141234871637197 0.000562313647700059 0.000930045329705791 0.000506576899622993 0.000493052426309612 0.0010987622538045 0.00106631045257301 0.000408485136751014 6.02405265619272e-06 0.000184170526304266 9.72849268747653e-05 0.000355585733242239 0.00044974325371581 3.03268328747643e-11 9.29824079929215e-11 3.22333796129031e-11 0.000327597625210957 0.00126012567273984 4.79362171465229e-157 1.36477902160928e-11 4.80388444509863e-11 1.90402494985219e-10 0.00059092384211323 0.000300158120696547 0.000119118709326537 3.50356938400448e-11 7.50045372203813e-18 8.63879594102119e-18 XM_005222621.1 LOC101902415 PREDICTED: Bos taurus uncharacterized LOC101902415 (LOC101902415), 2e-46 192 100.00 0.0345394736842105 NM_006954.1 ZNF33A Homo sapiens zinc finger protein 33A (ZNF33A), transcript variant 1e-12 80.6 68.48 0.087828947368421 0 noncoding 1 1 1 1 0.0504312900944125 0.663932438503613 -0.00427040357665467 0.966205410101427 GGGATGTGTGAAGGTATAGCCATTAATTTCACCAACTAGTTACTGAGCACCTACTGCATGGAAGGCTCTCCCGGGGCAACTAAGAGAAGTAGCACACAAGCTTTGTCCTCAATGAGCTTAGAATCTCAAACTGGATTCTAGAGTCACAGGCTACCCAAAGATAACCTTGTGTAGTAAGCTCCAGGTGTGACCCATGAAGGATGTGGCCTGAGAACCGCCTACTTAACCCCTGCTTACAAGTGCTGTTGAGCAGTAGTTTCTCCCCATGGTATGTAAGACTCTAGGTAATGGCCTTGTATTTCATGAAAAGCATAGCCACCCCAAGTTTTCTTAAGAACCCACCTAGCATATTTTTTGTAGTCAAAGAAGTAAAACAATGCATTGTTGCTCAAATGAAGCCTCCCTCATGCAGTGAGGGGCAGGGGAGTGGAATTATGGGTGCCCCTCCCTCTAAGGTTTCCTCGAGCAGCAAATCCAGCCATAGGTTATAAAAACTTCTCTCTGGGCAGCTGCAGCCTCTGCCTTCATGGGTGGTGGGGGAATCCAGCCTGCGGCCTAGAGTCCATTTTGAAAATTGCTGTTGATGCGAGCTTTATGGCCTCCAGAAGAGCGTTTGCCATGGGTGTTGATCAACCACTGTGTCCTCATCAAGTCACAAGGGTTTCACAGGAGGATTATTAAGGGGTTGGATCTTCTCACACACGCCACTTGACAATGTCCTCAGTATTGAGCAGTTTGTTTCCAGAAGAGGATTAAAGTCCAGCTGTGAATCGCTGCATGTGGTGTGTGTTCCGGGTTCTTCGCAGTTCCTTTACAGATCCAGAGCAGAGGTTTTGGTTAAGTGGCAGATGGTCTTAATCCTAACAAAACTATTTTGAGGTGCCCCTTAATGGTACCTGGGTTATCATATTACTGTTGCTAACAAACTTTTTTTGTAAAAGCATAGATAAGCACTATTATGATGTATGAGTTTTTGCAATTACCAGAAAATACACACATTTTGTAAATGTGACAATGAATATCAAAGTGCTTTCCTTAACTGAGTGTATTTTATTTGTTGTTTCTGCAAAAACAGACTGTGCCATTATTAAACAATCACTATTATTGTTTAATAATATAAACACATTATTAAACAGACTGCTATTAAACAATCCTTAACATTTTTAAACAGTCCATGACTTTGTATGCTCACCACATACAACCTCTTTTTAAAAGGTTTATTTTATTAATTTTTGTAGTGAAGTATAGTTGATTTACAATGTTTTAGATATACAGCAAAGCGGTTGAGTTATATGTATGTGTGTTTGTGTTTGTTTTCTTCTCCATTACAGGTTATTGTTCGGTATTGAGTGTAGTTCCCTGTTCATATTGCCTCTTAATATAAGCATGTACTTTCATACTCCCCGTCTCCAACCTGTTGTCTTTCTTTGTTGTCTCCTTGCAGTGGCTGAGTTGAGTATTGTTTCATGGTTACTTGTTCTCCCCCTTGTTCCTAAAATCCACCCCCATTCCACCCTAGCCTTTCTAATGCATTTAATAATATGTTCCTATATATCCTGGTGTTCTAGAGTATTTTCTTATCTGATCCCCAAGTGATTCTCACTGTATCAGTTAAGGTAATATGAGTTAATGGACCAAACACGATGAATTTATTATTAGCAATAAAAATTTCTCCTGCAAGCAGGCACCTCTCTCCTAAGGCAGGGCTCTGAGGATCCAGGCAACGATCTTTGTAGCTCTGTTATCTTCAGACCAAGGTTACCAAGGCTGCCAAGGTTTCTGGTAATGAGGAAGGGGAGAGAGGACTAAGGATTTCACTGGAGGATTATCTGGGTCATGCCTAGAGCAGTGCAGTCACCTCTGTTAAGTCTCATTGGCCAAGCTTGGTCAAAGACCACACCTAATGCCAAGGAGGTTGGAAAGCTGTTGTAAATGGTACCGTTGTTTACATTTTAGTTCTTCATTTGATATGTAGGTATACAATTAATCTGTTTCAATGTTGACTTTATATTCTGTGACCTAACTAAATTTACTTGTTCTAGTAATTGATTATAGACCATTAAAAATTTTCTACATAGTCTTCTTTAAAAAGAAAATATTTGATCTTTTTCTTATGATCATAATGGCTTTTCCTTGTGTTTTGAGTACCATGTTGAATGGAAGTGGTAAGAGTGGATATCCTTGCTCTGTCACTGACTATAGGGAGGAAACATTTAGCATTTCATTCCTGAGTGTGATGTTGGCTGTAGGTGTTATATTGATGCATTTTCAGACAGAGGAAATTCCCTTCTACTACTAGCATGCTGAGTGTTCGCTTCTTCATAAATTGATGTAGGATTTTATTAAATTTTTTTGTGTATATTTAAATAATCGTGTGATTTTTCCCTTTGTTATGTAAATATGGCATATTTTATTGAATGGTTTTCAATCTTAAACCAACTTTGCATTCTGGGCATAAACTCCATTTATTCATGATATATTGATTTATTAATATTTTGCTAAGGATATTTGCATGTATGTTCATTAGAGGTACTGGTCTATAGTACCCTTTCCCTGTATTATCTTTGTTTAGTGTTGGTATTGGAGAAATGTTGGATCCATAAAATAAGTTGAAATATTTCTACTCCTTTTTCTGAAAGAGATTGTGTAAGACTGCTGTTATTTTTTTCCTTAAATGTTTGATAGAATATGCTAATAAAACCATCTGGACCTGGAGACTTGTTTTTGAGAAACTTTAATAGTTAATTTCTTTTATAGATATTGGCATTCACATTTCATATTTCTTCTTGTATCAGCTTTAATAAGTTATATTATTTATAGATTTGGTTCATTATATCTAAATTGTTTAATTTATCATAAAGTTCATAGTATTTGCTTATCCTTTTAATGTTTTTCATTCCTGATATTGGTAATTTGTGTTTTTATTTTCTTGATTAGTATACCTAGAGTTTATCAATTTTTAAATCTTTTATTAGAACCAAGTTTTCATCTTCATTTTCTGTTTTTGTATTTTCTCTATTAGCCTTCATTAATTTACTCA TCONS_00126252 TCONS_00126253 r 5' 36233 TCONS_00126252 TCONS_00126253 r 5' 27683 EMBV3_13662 CAGACTAAGCAAAAGTGGTCACATCCAAACTCTGCTTAGAGCATTTGAAGCACGTGACCG Gene GeneID:534351|TMED5:NM_001046377:171_cdna UTR3_Alt 2 NULL GeneID:534351 3 GENE TMED5 MGC128799 transmembrane emp24 protein transport domain containing 5 EMBV3_14978 AGGGCTGGGGTACAAGGTCCTGGGCTCCATCTTCTTTGCCATTGCCTGCTTTCTGTACAA Gene GeneID:507969|SLCO4A1:XM_002692410:365_cdna Constitutive 0 NULL GeneID:507969 13 GENE SLCO4A1 NULL solute carrier organic anion transporter family, member 4A1 EMBV3_40140 AGCTGCAAAAATTTCTAGGACTGAATTAGGAAACTTTTGGAAGGTATTTAATAGGTTTGG Gene GeneID:533910|DLD:XM_002686779:93_cdna Constitutive 0 NULL GeneID:533910 4 GENE DLD NULL dihydrolipoamide dehydrogenase EMBV3_24769 AGGTTCCTGCAAGAAGGAGGTGTGACAGGCCCACCTGCCCAGTCCCGGCAACTGAGAGGA Gene GeneID:613671|EGFL7:NM_001078038:196_cdna Constitutive 0 NULL GeneID:613671 11 GENE EGFL7 NULL EGF-like-domain, multiple 7 EMBV3_04464 CCAAAGAAGGGATGACCTGGGCACATCTACCTGCCACCACCGTGCACGGGTGTGCCTGCC Variant GeneID:777789|C7H5orf32:NM_001078164:41_cdna 379^467 2 EMBV3_27296 GeneID:777789 7 GENE C7H5orf32 C5orf32 MGC134074 chromosome 5 open reading frame 32 ortholog EMBV3_25675 CAGAGGCAGCTACAGTAACATGGCCGAGAAGTAACAATGGCTTGGACTGTGAAAGTAATA Gene BVT0102_058967 + 0 NULL GK000011.2:35418140-36050192 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00031045 1 XLOC_017294 NonCoding TCONS_00031045 XLOC_017294 NonCoding NonCoding - 11:35933522-35934470 - TSS22044 948 1 TCONS_00031045_2 54 0.966244725738397 1 0 0.000502319970617441 0.000423984987248918 0.000214754878702483 3.50385601023012e-05 8.85359171844961e-05 1.50930558138889e-05 0.000184548001496045 0.000193414000025464 0.000133166852393592 0 0 3.771803194283e-06 3.02666767271386e-06 8.93163557296271e-05 9.83310573635807e-05 0 0 0 0.000317698871679706 0.00120615879618461 2.24156867588086e-05 0 0 0 0.000540830168170209 0.00200662761004165 0.000160694227661369 0 0 0 XR_232514.1 LOC100139664 PREDICTED: Bos taurus uncharacterized LOC100139664 (LOC100139664), 9e-08 62.6 80.28 0.0717299578059072 NR_002730.2 BRD7P3 Homo sapiens bromodomain containing 7 pseudogene 3 (BRD7P3), 2e-22 111 68.40 0.310126582278481 0 noncoding 0 0 0 0 -0.0966509348930445 0.408063264373933 0.0237687619234673 0.61620353709826 CAGCAAGAGTGTATAGAGTGCTGCTAGAGTGACGGAAATCTGGGGGCGTTTGCAATTTTAAACACAGTGGTCAGAGAAGGCCCCACTGAGAAGATGGTGTTTGAGCAAAGACTTGATGGGCATGAGGAAGCCAGACACATGAGTGGGACATCATTACAGACAGAGGGACCATAAAGGCCCTGTGATGAGAGTATGCCTGGCATTTTTGACAATCACCAGGGAAGCTAATGTGTCTAGACTGAAGCATTGGAAGTTACATCCACAAGTAGAGTATGGAAAGTAGATCATGTAAAACCCAATAGACCACTGACCTCTACTCTACATGAGCTAGAGATCCACTGGAGGATATTACGGAGAGAGAGAAGTTTTGACAGAATCATTCTACCTGACGCATTAAGAATAAACCATGAGGAGGCAGGGTAGGATTGAAGAGACTATTTAATTCAGAGGCAGCTACAGTAACATGGCCGAGAAGTAACAATGGCTTGGACTGTGAAAGTAATAGTGTAGATGGCAAGAAGTGATCAGATTCTGGGTCTCTTTTCTATCTAAACTCTCCTATCGGACTGTATATATATGAGAAAAGTAGAGGAGACAAAGGCAACTTCAAGATGTTTGACTTGACCAATTGCAAAAGTCGTTGCCTATTGAACAAAACTGGAAGACTGACACACAACTTCAAGACTGACTATAAAGCTACAGTAATCATGGCAGTGTAATATTCATGAAAGAATAGACAACCAGACCAATGGAACAGAATAGAGAACCCCAAAGATATAGCCAACTGATCTTTGACAAAGGCAATATGATGGGACAGTACTATCTCTTCAATAAAAGGTGCTGGAACAATTGGACAACAAATACAAAAAAATATATATATATATATGAAAAAGAGATTTTTCACAAAACTTAACTCAGAATGTATCATAGATCTAACATAAAACACAA TCONS_00027517 TCONS_00027518 TCONS_00027519 TCONS_00027520 TCONS_00027521 TCONS_00027522 TCONS_00027523 TCONS_00027524 TCONS_00027525 . 3' 319558 TCONS_00027517 TCONS_00027518 TCONS_00027519 TCONS_00027520 TCONS_00027521 TCONS_00027522 TCONS_00027523 TCONS_00027524 TCONS_00027525 . 3' 320505 EMBV3_42108 GTTGCAGAAATACCATGCCATCAACGGTCATCGTGCAGAAGTTGGGAAGGCTTTGTCGAG Gene GeneID:516616|LOC516616:XM_002688894:154_cdna Constitutive 0 NULL GeneID:516616 7 GENE LOC516616 NULL similar to Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 / hnRNP B1) EMBV3_22585 GTCTCATGGTATGCCACCCTGGTGACCCAGGAGTTCTTCAACCCCAGCACACCTGTCAAC Gene GeneID:513034|CLDN19:NM_001101084:146_cdna UTR3_Alt 3 NULL GeneID:513034 3 GENE CLDN19 NULL claudin 19 EMBV3_35549 CCACACTTCTTCTGTGACCTGGAACCCATTTTAAGGCTGGCTTGTTCAGACACCCAGATC Gene GeneID:528106|LOC528106:XM_002699546:47_cdna Constitutive 0 NULL GeneID:528106 X GENE LOC528106 NULL similar to olfactory receptor MOR128-2 EMBV3_31562 GGCTAGGTTTGGGGTTGGTATCTCTGTCAACAGTCACAGGTTTCTTTATTGCTTTGGTGG Gene GeneID:514846|LOC514846:XM_002685925:58_cdna Constitutive 0 NULL GeneID:514846 3 GENE LOC514846 NULL similar to putative olfactory receptor 10T1 EMBV3_43722 TTGTCAAACCGTTTACATCATCCTCCCAAGGGCACCTGAGCAGATCCCCAACTCCCCGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39013 GCAGGCATCCAACCTGAAGAGGTATCCTACATCAATGCACATGCTACTTCCACGCCTTTG Gene GeneID:513530|OXSM:NM_001075624:20_cdna Constitutive 0 NULL GeneID:513530 27 GENE OXSM MGC142360 3-oxoacyl-ACP synthase, mitochondrial EMBV3_27414 ACCGAACAGGGACCTCAGGAGGCAATACTCAAAGAGCTGAGCAGACACGAACCACGCAAT Gene BVT0101_034100 + 0 NULL GK000015.2:22920398-22978369 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199376 TCONS_00201906 TCONS_00201912 TCONS_00223729 TCONS_00062705 TCONS_00223718 TCONS_00070443 TCONS_00152632 TCONS_00187685 TCONS_00232656 TCONS_00112239 TCONS_00032895 TCONS_00187642 TCONS_00187684 TCONS_00046613 TCONS_00070445 TCONS_00232652 TCONS_00187683 TCONS_00152623 TCONS_00232666 TCONS_00032894 TCONS_00223736 TCONS_00070442 TCONS_00223726 TCONS_00054102 25 XLOC_121029 XLOC_123551 XLOC_123557 XLOC_137028 XLOC_037432 XLOC_137017 XLOC_042221 XLOC_092397 XLOC_113730 XLOC_142141 XLOC_068136 XLOC_019131 XLOC_113687 XLOC_113729 XLOC_026753 XLOC_042223 XLOC_142137 XLOC_113728 XLOC_092388 XLOC_142151 XLOC_019130 XLOC_137035 XLOC_042220 XLOC_137025 XLOC_031911 NonCoding TCONS_00199376 XLOC_121029 NonCoding NonCoding - 5:53751904-53753184 - TSS148944 1280 0.38203125 1 0 0.000143270592979489 3.55321988919004e-05 7.07907042547704e-05 0.000132983254255838 0.000133104721227159 0.000238325428959753 0.000187716640257667 0.000438550255834119 0.000783711450701534 7.3319997919907e-05 3.71800578440171e-05 1.71290707391799e-05 6.41863918044307e-05 0.000780329570878623 0.000116541449242934 4.79168614942832e-05 2.49682674966479e-05 6.44154264907136e-05 5.60229022993983e-06 5.94275441754921e-05 1.66092586491844e-05 3.31970121017723e-05 2.64844986868152e-05 0.000143956848512895 1.11994897527035e-05 0.00011864329605095 8.31990479997681e-05 7.45044394608617e-06 2.12494326757787e-05 3.07266940757157e-05 XM_866575.4 NEK11 PREDICTED: Bos taurus NIMA-related kinase 11 (NEK11), transcript 2e-43 181 93.33 0.09296875 0 noncoding 1 1 1 1 0.116881084633565 0.451925179500013 -0.751694190943773 0.000131260366214379 AAGAGCGAGATGGTGGTGGGGGACAGCCCCCAGTGAAATCAGAGGTGAGAGCACAAAGCAATACAGTAGGCAGACTCTGGTTTTTTTGTGGTGGAGATGCTCGAGAATATCCGGGTGGACTCCTGAGGCTCGATCCCGCATTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCCAGAGTGGAATGCCTCCCCGGCTCCCGGCACATGATCAGTGCATGCTCAGTCACGATATCAGCGCCTGCTCAGCCACGTGATCACTGACGGCACAGTCACGTGATCAGCGCCTCTCAGTCACGTGATCACCGTATGAGAAACACGTGATCAGTGAACGACCAGCCACGTGATCACTGCATGTGCGGTCAGGTGGTCAGTTCCTGATCAGGCACCTGATCAGTGCGTGCACAGTCCCCTGATCAGCGCCTGTCAGTCACTGATCACTGCCTGATAAACACGTGATCAGTGCATGATGAGCCATGTGATCAGTGCCCGATCAGCCACGTCATCAGTGCATGCGCAGTCACGTGATCAATGCATGATAGCCACGTGATCAGTGCGTGCACAGTCCCATGATCAGCGCCTGTCAGTCACTGATCATTGCCTGATAAACACGTGATCAGTGCATGATGAGCCATGTGATCAGTGCCCGATCAGCCACGTCATCAGTGCATGCAAAGTCACGTCATCAGTGCATGATAGCCACGTGATCAGTGCATGCTCAGTCACGTGATCTGTACTTGATCAGCCACGTGATCAGTGCCTGCAGAGTCACGTGATCAGGGCCTGCTGAGCTGCGTGATTCCTGCCGGCTCATCTGCATGACAATTGCCAGCTGAGCTGCGTGATTGCTGCCTGGTCACGTGCTTGATTATTGCCAGTTGAGCAGCATGATTCGTCACTGCTGAGCTCCATGCTTATTGCCTGCTGATTGCGTGGTTCGTGTCTGCTCAGCTCTTTGAGTATTGCCTCCTGAGGTCCCTGTTCGGTCGCCACCTGCCGGGGACCAGCCCCAACTGATCCAGGGTATTCGAAGGAGAGATGGCCTAGGCGACTATTTATATGCTAATCAGAGATGTCAAGGATACTAGTATGAGGAGAGCTCAGTAGGAAAATTCGGTGGAGAAAAGAGACTGAGTAGCTTGGTTTACGCGGAAGACCAATCAAACTTCAAGACAAGAAGTTTGCAGCACTTACGTAGGCCGCAGGCGCCCTCTCGCATAGCGGAAGGTGCCTCACACTAGACACCTTCTCGAGTGGGTCTTAGCAGCCCAGGCATAA TCONS_00195023 TCONS_00195024 . 3' 234632 TCONS_00195023 TCONS_00195024 . 3' 235911 EMBV3_13965 GGACCCATCCAAAACCTTTCCAGCCAACAAGGCCCATTTTAAGTTCTGTTTCTACCACTG Gene BVV0102_061130 + 1 EMBV3_08034 GK000005.2:51209165-51220564 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40938 CCTGCTGGCTGACAACAGAATATCCAGGCCACTATGGTGAGGAGATGGACATGATTTCCT Gene GeneID:504963|DPT:NM_001045903:93_cdna UTR3_Alt 2 NULL GeneID:504963 16 GENE DPT MGC138044 dermatopontin EMBV3_25807 TTGAGGAAAAGAATAATTTTAGTATTTCTCTTTAAAGTGTTTCATTTTGGAAGATCACCA Gene GeneID:788673|HECA:XM_002690282:43_cdna Constitutive 2 NULL GeneID:788673 9 GENE HECA NULL headcase homolog (Drosophila) EMBV3_12794 TCACCTCTGGCTTTTATTCCCTTCTCAGTGGGTCCCAGGAACTGCATCGGGCAGACATTT Gene GeneID:509506|LOC509506:XM_002688555:200_cdna Constitutive 0 NULL GeneID:509506 7 GENE LOC509506 NULL similar to Cytochrome P450, family 4, subfamily F, polypeptide 2 EMBV3_37251 AGTCATCCCCAGAGGTAGATGAAGACCGGATCCCCAACCCACTTCTCAAGCCCACTTTGT Gene GeneID:767949|PPP1R1A:NM_001130760:52_cdna Constitutive 0 NULL GeneID:767949 5 GENE PPP1R1A MGC128551 protein phosphatase 1, regulatory (inhibitor) subunit 1A EMBV3_29760 ACATTTGGAATGACACTGGATGCCAGCAACGTGGGGGCTTTCGCTGCAGGTCTGTTTTCT Gene GeneID:497015|TPM2:NM_001010995:23_cdna UTR3_Alt 3 NULL GeneID:497015 8 GENE TPM2 MGC129100 tropomyosin 2 (beta) EMBV3_24601 GCCTTTCAGCACACCAGATGTTGATAATGATGGGTGTCGTCCTGCATGCTTCATCAGTGA Gene GeneID:514285|ANGPTL5:NM_001128069:17_cdna Constitutive 0 NULL GeneID:514285 15 GENE ANGPTL5 NULL angiopoietin-like protein 5 EMBV3_35798 ACTAGCTGCCTAAGGTCACACAGTTAGGATGTGGGTTTGAATCCGGGCAGTGTGTCTCCA Gene BVT0102_002570 + 0 NULL GK000011.2:19699854-19704350 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027116 TCONS_00027117 TCONS_00027115 1 XLOC_015188 Coding TCONS_00027117 XLOC_015188 Coding Coding PRKD3 11:19701222-19788765 j TSS19302 6618 1 TCONS_00027117_4 779 0.0480507706255666 20 0.924630463092002 0.00276902590694723 0.00196521380812173 0.00206890311368788 0.00172035708479014 0.00176280978439409 0.000824188374687764 0.00196718429174308 0.00208501932227731 0.00399591773530078 0.000171963199700226 3.80124227006915e-05 2.49940202974061e-07 0.000657667023460975 0.00133787310932294 0.00115487124433603 0.000429400336601436 0.000652016625522833 0.000691465299657394 0.0014378828701028 0.00144675030836176 0.000783420828259013 0.000421233320059302 1.14210076509647e-41 8.65752623251254e-05 0.00198673435691382 0.00150537243181642 0.000932474830053343 0.000161004336463994 0.000157960045407275 0.000507923713641159 XM_005212648.1 PRKD3 PREDICTED: Bos taurus protein kinase D3 (PRKD3), transcript variant 0.0 5425 100.00 0.45436687821094 XM_005264237.1 PRKD3 PREDICTED: Homo sapiens protein kinase D3 (PRKD3), transcript 0.0 4044 90.54 0.444394076760351 TCONS_00027117_4 sp|O94806|KPCD3_HUMAN KPCD3_HUMAN Serine/threonine-protein kinase D3; 0.0 1544 97.23 0.973042362002567 4 coding 1 0 1 1 -0.161934655902557 0.48152687953616 -0.0106907608370295 0.857984750752305 CGGGACGGGGCGGAGGGAGGGAGGGAAGAAGGGGCGCCTGTGGCGGGCGGGATTCTGCGAGGCGCGTGAAGCCTCGCTGGCTCCTGGTCCAGTACCCAGACGCTGGCAGGCTTGGACTTTCTCACGACCGGCCGAGCCAGGCTCTGCTACCTACATTTCAGAAAGCATCAACCTTTCTCAATGGACGCGTTTATCAAGTGGAACATACCTGTTCTATTTTAAAAAGCTTTGTGCTTAATCTTGGAAAAATTTACTCCTTCAAAATGAAAATGAGGACATGTGAGAAGGTGATATAAGGTGTGGACATTTGAGAAAGTGTCCCATTAGATCAATGAACCAAAGGATACGAACTGAATAGATTAATCCTAAACACTTTTTAATTTTTAAACTAGGAGGATTTTATTTGACAGAAAAACAACTCTTATTCATTATGTATTTTCTGAAATTAAAAGAGAGAAACAAGAGTAGACTTAAAAGAAAATAGGTGAAGATGTTTAGTAGATAAACAATGCCAACTCTTTTCTGATGAGGATAATTCAGTGATGTTAAATCCTTCCCAAAACCCTGGTTGTGGTCCTAACAACAAGACTTTTTTGATGGGACTGATATTAAGGGAAGTGGGACCTTTGGTATAGTCAACTCACAGTTGTAGAACTTGCCATCATCAGCATGAGTGGCTTAAAAGAGGAAATAAAGAAGCTTTCAACTAAATCCAAAACTACAGTCATTTTTTTACCGCTGTGATTTTAAGGCCTCTTCATAACCATTGAAAAAGAATTGACAACTGTTTTAAAAGATTAAAGAAAGGCAGATGTCTGCAAACAGTTCTCCTCCATCAGCTCAGAAGTCTGTAATACCTGCCACTCTTCCTGCTGTGCTTCCAGCTCCTTCTCCGTGTTCAAGTCCTAAAACAGGACTCTCTTCGAGACTCTCTAATGGAAGCTTCAGTGCACCGTCGCTCACGAACTCCAGAGGCTCAGTGCATACAGTCTCATTTCTGCTGCAGATTGGCCTTACACGGGAGAGCATTACCATCGAAGCCCAGGAACTATCTTTATCTGCTGTCAAGGACCTTGTCTGCTCCATTGTTTATCAAAAGTTTCCAGAGTGTGGATTCTTTGGCATGTATGACAAAATTCTTCTTTTTCGCCATGATATGAACTCAGAAAATATTCTGCAGCTCATTACCTCAGCAGATGAAATACACGAAGGAGACCTAGTAGAAGTTGTTCTCTCAGCTTTGGCCACAGTAGAAGACTTCCAGATTCGTCCGCATACTCTCTATGTGCATTCTTACAAAGCGCCTACTTTCTGTGATTACTGTGGTGAGATGCTTTGGGGATTGGTACGCCAGGGACTGAAATGTGAAGGCTGTGGATTAAATTATCATAAACGATGTGCCTTCAAGATTCCAAATAACTGTAGTGGTGTAAGAAAGAGACGTCTCTCAAATGTATCCCTGCCAGGACCTGGCCTCTCAGTTCCAAGACTCCTGCAGACTGACTATGTAGCCCTTCCCACTGAAGAGTCACATGTTCACCAAGAACCTAGTAAGAGAATTCCTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAGATGGTCATGTGCAGGGTGAAAGTCCCACACACGTTTGCTGTTCACTCATACACCCGTCCCACAATATGTCAGTACTGCAAGCGGTTACTGAAAGGCCTCTTTCGCCAGGGAATGCAGTGTAAAGATTGTAAATTCAACTGCCATAAGCGATGTGCATCTAAAGTACCGAGAGACTGCCTTGGAGAGGTTACTTTCAATGGAGAGCCATCTACTTTGGGAACAGATACAGATATACCAATGGATATTGACAGTAGTGACATGAACAGTGATGGTAGTCGGGGCTTGGATGACACAGAAGAACCATCTCCTCCAGAAGATAAAATGTTTTTCTTGGATCCATCTGATCTTGATGTGGAAAGAGACGAAGAAGCTGTTAAAACAATCAGTCCATCAACGAGCAATAACATTCCGCTGATGAGGGTCGTCCAGTCCATCAAGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGGAAGGGTGGATGGTCCATTACACCAGCAGGGACACCCTGAGAAAAAGGCATTATTGGAGACTGGACAGCAAATGTCTTACACTGTTTCAAAACGAATCTGGATCAAAGTATTATAAGGAAATTCCACTTTCAGAAATTCTCCGCATATCTTCACCACAAGATTTCACAAGCATTTCACAAGGCAGCAACCCACACTGTTTTGAAATCATCACTGATACTATGGTATACTTTGTTGGTGAGAACAATGGGGACAGCTCTCACAATCCTGTTCTTGCTGCCACTGGAGTGGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGCCAAGCTCTCATGCCTGTGACGCCTCAAGCCAGTGTCTGTACTTCTCCAGGCCAAGGGAAAGATCACAAAGATTTGTCTACCAGTATCTCTGTATCTAATTGTCAGATCCAAGAGAATGTGGACATCAGTACCGTTTACCAGATCTTTGCAGATGAGGTACTTGGTTCAGGCCAGTTTGGTATCGTCTATGGAGGAAAACACAGAAAGACTGGAAGGGATGTGGCTATTAAAGTAATTGATAAGATGAGATTCCCCACAAAACAGGAAAGTCAGCTCCGTAATGAAGTGGCTATTTTACAGAATTTGCACCATCCTGGGATTGTAAACCTGGAATGTATGTTCGAAACCCCGGAAAGAGTTTTTGTAGTGATGGAAAAGCTACATGGAGATATGCTGGAAATGATTTTATCTAGTGAGAAAAGTCGACTTCCAGAACGAATAACTAAATTCATGGTCACACAGATACTTGTTGCTTTGAGGAATCTACATTTTAAGAATATTGTGCACTGTGATTTAAAGCCAGAAAATGTGCTACTCGCATCAGCAGAGCCATTTCCTCAGGTGAAGCTGTGTGACTTTGGGTTTGCACGCATCATTGGTGAAAAGTCATTCAGGAGATCTGTGGTGGGAACTCCAGCATACTTGGCCCCTGAAGTTCTCAGGAGCAAAGGTTACAACCGTTCTCTAGATATAATGCTGCATTTATGTACCCACCAAATCCATGGAGAGAAATTTCTGGTGAAGCAATTGATTTGATAAACAACCTACTTCAAGTGAAGATGAGAAAACGTTACAGCGTAGACAAATCTCTTAGTCATCCCTGGCTGCAGGACTATCAGACTTGGCTTGACCTTAGAGAATTTGAAACTCGCATTGGTGAACGTTACATTACACACGAAAGTGACGATGCCCGCTGGGAAATACATGCATACACACACAACCTTGTATACCCAAAGCACTTCATTATGGCTCCCAATCCAGACGACATGGAAGAAGATCCTTAGTTATCAGTGAGCTAACTTCAGTAAGGAAGCATGTCATGTCATGGACTGGTGTTTTGCTGCGTAACTGTTGTTCTTTGTATGCTGTCATCTGAAAGGATGCAAAGATATGGAAAATATAAGGAATCAGTGACACCGATACTGTAGTTCATACTGAGTAGGTACAAGAGGGGAAACTGAGTCATAAAAACATAATGGAATCCAAGATGAAGCTTTTCATAAACCTTTACAACGTAAGCAATAACTGGTTTTTGTGTTTTTCCCTAAGCGCTCATTTTAGTACAATAGTGGCACTTAATTTATCTTCCTTTCTTGTTCTTACATCATTTTTTTTAAAAGGAGAAAAAAGGCAAGCCAGAGTCCAGTTATTGCATAGCTTGATCAAATCATACAAGAGTTATTACACAGTTTATAACTAAACAGATTTGCATTTATGAGATAACTGAGAGGCTACCAACATGCCATTTCCTATAGACTTTAAACATTTGTTTAACTGACCACAGAGGCACTGAGGGGTTTTTCCTAGATGCCTAGAAAGGGAGTGCTGAACTGGTTTACCCTTCTCTTTTAGGTCAGTTAAACTCCAAAATAATAGTATTGCTCTAATTTCTTTGGGGTTGAAATTCTGAATATGCTCTTAACATGAAAAGTTGTCACCTTTTGTTTGTATGTTGCAACAGCCCCTAAGATTATTTGGGACAACTGATACACAAAAGCAGGAGTAGGAACTGCTGGTCTAAGTGCTGAGTTGTTACATACGTCTTCCTGTAGTTCAACTCTGCTGCTAAATAATCACATTCCCATTGATGCTGTTGTGATGTCACCATTAGATTCCAACATTTAATGGGTACAGATCTGAACTCTAATCACACAATTTCTCTTTACATGGGACTGTATAATTTGAGGAAGAAAATTAAATACATGCCAAAAGTAGGGACAGTGCAGGGTTAGTTGATGCTACAGGAAAGAATAACAAACAATATTCTTTTTTTCTTCCCTTAGCTTATTGGAAGGCTTTACAGATATCTGGAATGTTTTTAAATCAATTATTTTCAGCAGTTTAGGGGAGTGGGTGGGGTAGAGCATGAAACAGTTTATAAAGAGTAGGGCTGTATTATCAGCTGAGCAAATGAAAGAATGAAGTATTTTTAAAAACACTGCAGCTCCAGCAGCCAGCTAAAGACAGTTTTTGTACCCTAACATCATATTTAAGAGGTTAGATTTTTTCATAGCTTTTAAAAGTTACTAATAGTTTCCCCCAAAAAAGTTAAAGATCTAGGACTATCCACTTATAAAAAATCTAGGGGCTTTGTGTTTCTTGATTCCTAAATAATCACTGTGAATGTTTTTTTTCCCCCTCCAAAAAGAACAAAAGATGTGAAGCCCAAAAATCTGGCTCCACTCTTAAGCTGTGTTGACCTCGGCAGGTGACAACCTGGCTGAGCTTTGAGCTCCTCAATCTATAAAATAAAGATTATAATTCCTGCCTCTGTCTTCCTTAATGTTGTTGTGAAGATCAGATATTTATAAGCTAAAAGTTATAAAAGTGTTAACTGTCATTTCCCATGGAATCTGAGATAGCAAAAGAATGTTCTTGTGAACAGAATGAGAGGGCCTTCAGAGATCCCTGAAGCTGCTCCCTTGTGTAGGGCTAAAAATACCCTTGAGAGAATGGAAGCAAACACCAGTGCTCCTCTGTTCTGAGCTCTTTACATGTTTTTCCCTCACAGGAGACATGGATAAGTCATCGAACTTTGTCTCACAGATAAGGAAAGTGAGGCACAGGAAAATTAACTAGCTGCCTAAGGTCACACAGTTAGGATGTGGGTTTGAATCCGGGCAGTGTGTCTCCAGAGTCCTTATTGCTAACCATTCTGCTATACTGCCTACCGTTAGATATTCCCAGAAGACATTCCACAGTGTCTCTCACTATTTCATTCTCATACAGGAATTTAAAAAACTAAAAGCAAATTAATTATGTAAAACCTTTGGGAAATGTATTTTCCCTGTGATAGGAGGTAACTTCCCCTAATTTCTCTAAGTCTGTTTATACAATCAGTGTGCTCAAATGAAGTAATTTCTGAGTCCTAGGCACCCTATTGTGGTTTTACTGTGTAAGATGAAAATTAACTGGAATGCTGTTTGCTATACTTATATAATAAAACTTTAAAAGCCATAAAATTAATTGCACTCTTTGTTTTTGTTATTGAGAAGTTTTCTTAGAAAAAACTGTAAAGGCACTGTCAGATAATTTGGAATTGAGTAATTTTCTCCAGTTACTGTATAACCTGCATAACCTTTTTTGTCTTGAAGTCATCATGTTTGTATAAGAAATAACTGTTAGAAACATTTGATAATGTATACAAAGTCTGTAATGACATTGTTTAGTACATTTTTAATTATATCCCACTTTTTGTAAATATCCTTGAAGTTTGATAATAAAATGTATTTCCATATCACTGTACTTTTCCATGTGGAAACCTGAGCTAGTAGAGGTATCCAGAGAAAATTGTATTTGGTTGTGTTATTTTCCCAGGCTTTAGTAAGAGAACTGTTTTGGAAATAGTATTTGTAAATGAAACTAATGCTATATTTAAGAACACAGATTTTTTTTATCTGACTAAAATAAAAAACAACTCATTATTACAATTTTATACAAAATTTGAGGTTATTACCTCAAGGTCTCATTTCTTAAAAGTTTGGAATAATTAAAAGTTTTTCAGAAACTACCATTAAATATTCAACTATTGCAACTGCCAAAAGACTTAAGTAAGTTAATTTATGTTTTTCTAGGTTTTAAGAAGCACTGGCTAACTCTTTCCCCTTAATCATGAAAACTATTAAATAATTGGGAAGGGCCAACTATGGACATTTTCATTGAACACTCTGCCAGTGAACTTCCAATATAGTTAAGCTATAAATTGAAGATATACAGCTAACATTCTTTTAATCTCTCAAATTTGTGTGGCTATTACTATAATTCTTCAGAAAGTCCATGTCTGGTATTATTAAAAAGTTCTGTGAACCAAAAGAATGGGAACTTACAGAAATAAATCTTGACAGTTATCTGGAAATGAGAGAATTAACTAATTTTAGAAAATTATTTCTCCTAAGTCTGCATTTACTCTCATTCATGTTTTAAGTACATGTCAGGTTGATTGGTTTTACTGTGACTTTAAAATTTTTTTAATCAAATTTTGGTTTTAATTATAAAATTCACAG EMBV3_34687 AAGTCAGAAACCTGCAGTTACTCACGCAAGCCTCAGCCGAGGGTTCTCCATAAATGCAGT Variant GeneID:783254|SAMD12:XM_002692719:153_cdna 603^652 1 EMBV3_24439 GeneID:783254 14 GENE SAMD12 NULL sterile alpha motif domain containing 12 EMBV3_29981 GGGATAAAGAGGGTAAATATGCAATGGCCTGGGGCGTGGTGGAAAAGAAGCAGACATACG Gene GeneID:614196|LACTB:NM_001099133:130_cdna Constitutive 0 NULL GeneID:614196 10 GENE LACTB NULL lactamase, beta EMBV3_15534 CGTGGCAAAGACCTGGATACAGACTTCACAAGTAATGCCTCCCAACCTGAGACTAAAGCC Gene GeneID:532189|LOC532189:XR_083972:306_cdna Constitutive 0 NULL GeneID:532189 19 PSEUDO LOC532189 NULL similar to Carboxypeptidase D precursor (Metallocarboxypeptidase D) (gp180) EMBV3_42354 TGCCAACAATGACCTCGGCAATTATACTGTCCCACAGGCTGTAAAATTGTATCACGTAGC Gene GeneID:508193|SLC39A8:XM_002688120:29_cdna Constitutive 0 NULL GeneID:508193 6 GENE SLC39A8 NULL solute carrier family 39 (zinc transporter), member 8 EMBV3_31709 ACCAGGTTTGGGAAGCCATTGGGATTGGGCAGTAACAGGCTCTCTGGCTCTCTTCTTACA Gene BVV0102_061477 + 0 NULL GK000011.2:6361285-6545165 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02013 TGACTGGCAGATGGGACGCAATGGAAAGCAGTGGTTGCTGGGGAAAACCTTTGACACCTT Gene GeneID:404123|FAHD2A:NM_205790:23_cdna Constitutive 1 NULL GeneID:404123 11 GENE FAHD2A FAHD2 MGC137571 fumarylacetoacetate hydrolase domain containing 2A EMBV3_08568 CCCTCAGAAATTTAGAAAGGAGCCCTGGTCCCGTCTGGAGGCCGATAGTCCTTTGGGCTT Gene BVV0102_229131 + 0 NULL GK000003.2:106275254-106278819 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174515 TCONS_00174513 TCONS_00174514 TCONS_00174520 TCONS_00174524 TCONS_00174517 TCONS_00174518 TCONS_00174522 TCONS_00174519 TCONS_00174512 TCONS_00174516 1 XLOC_104636 Coding TCONS_00174513 XLOC_104636 Coding Coding ZNF642 3:106257539-106276879 j TSS129511 4845 1 TCONS_00174513_6 422 0.177089783281734 7 0.749831945808987 6.48552567803065e-06 0.00155663497647541 0.00131350472250675 0.00109616902121622 0.00198840889921272 0.000453234484503708 0.00138853670266154 0.00107687881627825 4.72812836582092e-07 6.17989932413564e-07 0.000141429881748614 1.28954369136372e-08 0.00012941943808526 0.000866795307556917 0.000818776678581149 4.09795696908855e-21 1.86817053493146e-07 1.25442224567279e-07 0.00172801177931622 0.00152921287690672 0.000450120487247332 0.000182481954262613 0.000159748275914087 3.1286391224087e-07 0.00207880174268397 0.00155319834954161 0.00117939985301796 1.65995182248779e-08 7.25511934333883e-05 1.52323372504686e-08 XM_005204748.1 ZFP69 PREDICTED: Bos taurus zinc finger protein 642 (ZFP69), transcript 0.0 4392 98.07 0.523219814241486 XM_005270809.1 ZFP69 PREDICTED: Homo sapiens ZFP69 zinc finger protein (ZFP69), 0.0 2516 82.47 0.517647058823529 TCONS_00174513_6 sp|A7MBI1|ZFP69_BOVIN ZFP69_BOVIN Zinc finger protein ZFP69; 0.0 884 100.00 0.997630331753555 6 coding 1 1 0 0 -0.129274162510438 0.311534098597677 -0.026536796967772 0.625869131244778 GTGGCTGGGAAAGTGCCGTTGGAGGGGCTGTGGGTTTATCTGGTGCCTCAGCACCCGCCCTAGGCCGCCTCTCAGAAATTTAGAAAGGAGCCCTGGTCCCGTCTGGAGGCCGATAGTCCTTTGGGCTTCAGAAGGAAGCCTGCGTGAATGTTCGGCGTTTTTTAAAAAAGTCATTGTGTTGGATGTCGATGTGGTCTGTCTATAAAAGGCTGGGAAAAAACAAAATCTCTTACCGGTCCTTCTCTAAAGAGACACCCTCTGGAGCTGAAAGCCTCAAGAACCGGCTGTCTCACGCCTCCCATCTCTGGTCGTACCAGCGTCCATGGCCTCTCTGTTTTAAGTATGTTTCTGCAAGTTCTGGAGTTCTATCTGTATGATCAGTTTTGTGGATCCCTCCTCCCTGCCTTTTGCTCCTCTAGAAGAATATGAAGAGGCGTATACTCAGACCTACTCAACCAGCCACCTGCAAGCAGGCAGGACTTAATTTTAGAGAGGAATCAGTTTTTCAGAGCTGTGAGAGCCACATCAGCCTCTAGGAGCCCCTAGGTTCTGGTGCCACAGGCACACGCAAGAATCCTGAGGGCAGGAGACAGATCACAGGAGGACCACGCAACTGTGAGGCATCTAAGCAGAGGCTCTGGCCATTTGCTCACCAGAAGTGGACAAGGTCAGTCAGGAGGCATCGTCATGCTGCAGCAGCTCCTGATCACCCTGCCCACCGAGGCCAGCACATGGGTGAAGTTGCACCATCCAGAGAACGCCAAGGAGGGGGCGCCCCTGTGGGAGGATGTGACCAAGATGTTTGAAGGAGGAGCTCTGCTATCTCAGGATGCTGATGAGACCCAGGGAGAAAGTTTAAAGGATGAATTGACCCCCGGGACCCCAACAACAGACTCCCAGCAGGGCCCCAGAATTTCAGCCCTGGAGGAATGCATTGGTCTTTGTGACAGAACTGTTGACCTTCAAGGACATATCTGTGGACTTCACCCAGGAGGAGTGGGGGCAGCTGGCGCCTGCTCACCGGAATCTGTACCGGGAGGTGATGCTGGAGAACTATGGGAATCTGGTCTCAGTGGCAGGTTGTCAGCTTTCCAAACCTAGTGTGATTTCCCAGTTGGAGAAAGGAGAAGAGCCATGGATGACAGAGAAAGAAGGCCCAGGAGATCCCAATTCAGACTTGAAGAGTAAAACAGAAACCAGTGCATCAAATGCAAAATACAACATTTTACAAGAACAGTTATATCATGGCATGATGATGGAAAGGTTCATGAGGGATGATGTCATTTATTCCACATTGAAGAAAGTCTCAGAATATGATGATGAGTTAGAAAAGCACCAGGATCGCCATGGAAGAAATGTGAGACAAACCATTATGACCCATAAGAAGAGAAGCCAAGAAACTTACAAATTTGGCAAAAATATTGTGAGTTCAAATGTTGTTATAGAACAGAGGCTCCGTAAATGTGACACACCTAGAAAGAGAAACAAATGCAAATCAGATGTGATTAATCATCCAACAAGTTACATAAGAGTAAAAACCTATGAATGTAATATATGTGAAAAGGCCTTCAAACAACCCATTCACCTTACTGAACACATGAGAATTCATACTGGTGAGAAACCTTTCAGATGTAAGGAATGTGGTAGGGCCTTCAGTCAAAGTGCATCCCTTACCACACACCAGAGAATCCATACTGGTGAGAAGCCCTTTGAATGTGAAGAATGTGGCAAAGCCTTCAGACATCGCTCATCTCTTAATCAGCATCATAGAACCCACACTGGGGAGAAACCCTACATATGTGATAAATGTCAGAAAGCTTTCAGCCAGAACATTAGCTTGATCCAGCATTTGAGAACTCATTCTGGAGAGAAACCCTTTACGTGCAATGAATGTGGGAAAACCTTTAGACAGATTAGACACCTTAGTGAACATATAAGAATTCATACTGGGGAAAAGCCCTATGCATGTACTGCATGTTGTAAAACCTTTAGTCATAGAGCTTATCTAACACATCACCAGAGAATCCATACTGGGGAGAGACCCTACAAATGTAAAGAATGTGGGAAAGCCTTTAGGCAGAGGATACACCTTAGCAACCATAAAACTGTTCATACAGGAGTGAAAGCATATGAATGCAACCGCTGTGGAAAAGCATACAGGCATGATTCATCCTTTAAAAAACATCAGAGGCATCACACAGGAGAAAAACCTTATGAATGTAATGAATGTGGAAAAGCCTTCAGCTATAATTCATCACTAACTCGACACCATGAAATACACAGGAGAAATGTCTTCCAAAATAATATCTGAAAACAGATTATGCACCATGAGAACAAAAGCTAAATCTAAATCAGTAACCCTGTGCTTTGAATTTTAGGACTCTAAATTTGAGGAATTGACATAATGATGCCAACTTCTAGTTTTGCTCATTGTGTAAATAAACACTACGTTGATAACTACTATTTACTAATACCTCCACACAGAGTTACTTTATCGAGAATAAAAGATGGCCCTTCAATTAAATTCAACAATATAGAAAATTTTGTACATCATTATTTTTATGACTTCATGGTAGATTAATAAATTATTTTTCTTGGGCATTCACAGATACAGACCAGCATTTGGAAACTACTGTTTAAAACATCACCACCACCCCTAATTTTGTAATTAAAATTTTATTTTTTTAATGGGGAAACCCTTCACATGGTATAAATTTCAAAAGGTATGGTCAGTTTTGTAAGTGAAAGGCCTTCTTTCTCCATCCTCCACACAAAATTCTACCTACAGGCAGCCATTTTTTATAACTCATATTTTGTACACCCTTCTAGAGAGCTTTCTGTTTAAATCCAAGAGAATACAAGCATACATTTTTTTTACTTTTAAGCATAAATGGCAGCTCCCTAGACAAATGCATATTACTTTTATTACTTCACTGTGTATCATGGAGGTTATTCCGTATCAGTAAACAGAGTGCCTACTTGTTCTTTTTTAACAGCTGTATAGTATTCCATGGTTTGAATGTACTTTATTTAGCCATTTCATTGTACATGACCTTTTGGATTTCCAGTCTTTTATTTATATAATTTTGCAGTGAATACTCTTACACATTTTTTTTGTTGCTCACATGTAAGAAGATGCAGAGGGTAAATTCCTAGAATGGGAATTTCTGTGCTAAAGGGTATGTGCATTTGTATGATGGATACTGCCAAACTGACCTTCAGAGAGGTTGGACCAATTTATTTCCCTACTAGCAAGATAGAGAAGCCATGTGGGAGCCATATCTGGTACTGAAGCATCTCCAGCAGCCTTATAATCCATTAAAGAAGTATCAGTTTATCTCAATAACATAGCCTAGAAGTACAGTCCAAGCTCATCCCCCAAAAGAGCAGTACTTGCCATCCCTGGAGTCAGCATTAGCTGAATCTTATCAAATAGCAGCCAAGGCAACCAGTCTCTGTTGGAGAAGAAAACATCTCTCCACCAACTGCTCCAGTCCCTAACTTCTGAGGTTGGAACTGTCTGATGAAGTATAGTCACTTAAGAGACTGATCCACCTGCCTTAGCAAGTATAATCCTGGCTACAACACCTTTGTTTGGAATGGAGGAAAATGGACAATTCAGTCAGGATACTTAAGATGGCAGGCTAAACTACAAAGGATCAACTGACCATACATAGCATTTTATGGCTATGTTAGTGAGTTACAGTTCACTTGTGGAAGGAGACAGAAATGAGATAGGACGTGACTTTCTAATTAATAAACATTAATTAATGAGAGCATTAATTAATTTGTTGACATTGCTTATTACATTGTGAAAGCTGAGTGCCAATGAAAGGACCACAGTGATTTTGTAGATGTTCACTTTTCATTTTGGCAGTTTTATTATTTAAAATTTTAGTGATTCTGTAGAGTGTTGATGGATTTCCCATCTCCATCACCACAGCCACTAATCAAGTTATAAACCAAAGCCTGGCACTCATTACATCTAGTCTACCTTATAGCTTCACCTTCCGTTTACTTTTCTCTTTCCCATATGAGCTCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCCGACTCTGTGTGATGAGAATCTTTTAAGTTGCAAGTAACAGAAATCAACTAAGGCTAGTTAAGTCTTAAAGGGGGATGTTAATAGAAGGATATTGGGGTATCATGGAATTCAGGGCAGTGATACATTATAACAGTGGTCTGAGACAGAGATCTGAAATGCTTTGGAAAACCCAGGCAGTTTTCTCTCCATCTCTGATCTTTGCTTCTTGTGTCTTCATTCTTCAGCTGCCCCCCTCCCCCACCCCCAATACCTCATTTCAAATCACGGTTATCATCAACTTTAGATTTTACATATATTCCCTTTTCATTACCCAGAGAAAAACTGTCTTCTCTTCCTTACTTTTTATCTCAAAATCCTGAGGAAGGTCTTGTATTGACCCAGCTAGGTCAGCTGCCTCCCCTAAACAAATCAATTGTAAGCAGAGATCTCAGCGTCTGTGGGAACCACGTGGAGGGTGTGATGGTGAATGGGAGAGGAGGGCTGGAGGGGCAGGAGAGCAAAAGAAAGAGTTACTGTTCATAGAATTCCAGATCCTACTCACTCTTCAATGCTGGCTCATCAGATCAGAACTTAAGAGCTGGAAAGGGTCTAGGAATCCACCTGATTGAAACTTCTCCCTTTATAGATGAAGAAGTGAAGAATCCCCTTCTTGAATTACTCACATCTTTTCACCTGAGTCGTATTTTTTTAATCATGTTTTCCTCTAAATTTGTTAACTTTGTTCTCCAAACACTTGCCCTTAATGGCTGACCATAGCTGCACTTCATC EMBV3_00050 TTGCAGCCGCTCGCCTGGCTCTGAGAGCCAGGATGGTGATTTTAGAGAGAAGACAGGTTT Gene GeneID:514485|SLC35C2:NM_001046174:1060_cdna Constitutive 0 NULL GeneID:514485 13 GENE SLC35C2 MGC137415 solute carrier family 35, member C2 EMBV3_04697 CGCTGTCGGCAGTTCTGCGCCCTCTTCTGTGATCCTGACTGAATCAATGCTTTATACTAT Variant GeneID:528398|AHI1:XM_002690265:58_cdna 248^310 1 EMBV3_03972 GeneID:528398 9 GENE AHI1 NULL Abelson helper integration site 1 EMBV3_18978 TGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTACCAGAGATTGCACGGATG Gene GeneID:100337232|LOC100337232:XM_002692373:262_cdna Constitutive 0 NULL GeneID:100337232 13 GENE LOC100337232 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_31544 CCAAACCAGATTCAGAGACATGAACTGACAAGGTGGAAAGGACCTACAGGGCCAGTTGCC Gene BVT0101_018206 - 1 EMBV3_04001 GK000018.2:24519433-24765329 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082628 1 XLOC_051062 NonCoding TCONS_00082628 XLOC_051062 NonCoding NonCoding - 18:24602148-24607119 - TSS62288 971 1 TCONS_00082628_1 83 2 0.805030181086519 0 0 0.000266851388426552 9.40737437545696e-05 1.01692601402981e-05 0 1.80176254273629e-05 0 0.000203145399667603 0 0 0 0 0 0 0 0 0 0 1.4812435627808e-05 0 0 0 0 0 0 0 0 0 0 XM_005218553.1 CES5A PREDICTED: Bos taurus carboxylesterase 5A (CES5A), transcript 2e-168 596 100.00 0.338825952626159 NR_027078.1 LOC283856 Homo sapiens uncharacterized LOC283856 (LOC283856), non-coding RNA. 1e-63 248 79.45 0.294541709577755 0 noncoding 0 0 0 0 0.0355826911127063 0.83517140632554 0.000298014503370206 0.995394161364297 GGCCTGAGGGGTCACTATGAACCAGCGGAGACCTGCTCTCCTGGTGTGGGGGCAGGCACAGCTGGAGCAACTGGAGGGAGAAGGTGACCAGCTGGCAAGCCCCAGCGGGATGGCCAACCCCCGAGAGATAGGAGAGCGGAAGAAACAGCCTGGCAGAGGCCCGGAGATGCCGGCTGGCGTCAGTGATTTCCTGCAGGAGATTCTGCCGGCCGAGTGCACATCATCCTTCTCTCGCCCCTCCATCTTCTCCCATGTGCTGTTCAAATAGACTAAAGCAACCCTGGGTCATGCTCATCCAAACAGTTGTTTAACCTCATCTGTGGCACCCAGGTAGGAGGCAGGATCATCCATTTGGAACAAGAGGGGGAGGAGATGAGATAGATCCCTGAGCACCTGGATTCTGCATTACAGAGCTTCTCTTTCCACACAGAGGAGCCTTTTGGGCCCTTGCTCAGAGATCATTGACTCTTACTTAACACACAGCTCTAATTAGCTTGGTAAAGTACTTTCTGGCACCTAAGCATATTGTTAGTGGAAGTGAAAGGTGGGGGAAAGACTATTACAGGCTGGAGTCAACTCTTAAGAGCTAGACAGAGGAGATGGGGTCTGTGGGGACGGCAGTGGCTGGGTTTCCTGCTCAAAGGGGGACACTGGGCAACTGGCCCTGTAGGTCCTTTCCACCTTGTCAGTTCATGTCTCTGAATCTGGTTTGGCTGTGGTAGTGAGGGGCAGAGGAGGTGACGGTGACTCCAGTGGGGAGCTGGTATCCATCTGGAAAAGTGGGCTTGTATTTTGGGGAACTCTGAGTTTTGGTGCACAAAAGTAGTCACCCGCTTTTGCCGGTGATACTTGTCCCTCATGGTTAGGTGATACTTGTCCCTCATGGTTATGATCTGCTTACCTATCTGTCACCCTGATCCCCAAGCATCCCTAGCATCCCACACAGTGCCTGTTGGAACTTAATAAATAAT TCONS_00085783 r 5' 82068 TCONS_00085783 r 5' 82068 EMBV3_20353 GATGTAAGTCCAAACCTCTGAGAAACGAGCAAGAAAGAGATGAAGAAGCCGATAACCTGG Gene BVV0102_190912 + 0 NULL GK000010.2:77022449-77181078 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35537 ACCAGGAGGTCGATGACTGATGGAGAGTAACACCTGGCTATCTCATGACTACTAACTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01013 GCCTACCAACGTCAGGAAACGTGGCAAAAGAGTGATGAGATTTGTTCTGGCTACAATGCC Gene GeneID:508740|CLEC12A:NM_001105345:31_cdna Constitutive 1 NULL GeneID:508740 5 GENE CLEC12A MGC179455 C-type lectin domain family 12, member A EMBV3_31760 AGGTGGACCTAGACAGGCGGGCATACGCTGAAGTGGCCAACGCTGCAGGACCTGGCCAGT Variant GeneID:513051|MUTYH:XM_002686424:391_cdna 604^677 1 EMBV3_21184 GeneID:513051 3 GENE MUTYH MGC128714 mutY homolog (E. coli) EMBV3_14305 AGAAGACCATGGACAAGGCCCTGGAGAAGTCCAAACGGGAGCGGGCCTACAACAGGTAGT Gene GeneID:513047|ING1:NM_001077914:54_cdna Constitutive 0 NULL GeneID:513047 12 GENE ING1 NULL inhibitor of growth family, member 1 EMBV3_34422 CCCGGTTTTCACGGAATTAATCAAAGCTAAGGGTGAAGGGAGTGAAGAGCAGAATGGCGG Gene GeneID:100140164|LOC100140164:XM_002687788:62_cdna Constitutive 0 NULL GeneID:100140164 5 GENE LOC100140164 NULL hypothetical protein LOC100140164 EMBV3_20895 GGCGGATGAACTAATCAACGCAGCTAAGGGCTCCTCCAATTCCTACGCCATCAAGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05328 GCCCGGATCAGGAAGACGCCCCGGCCTCAGGACTGGCTGTGAGCTTGGGGCTGGGAGCAC Variant GeneID:514322|ADCK4:XM_002694992:191_cdna 282^348 1 EMBV3_21896 GeneID:514322 18 GENE ADCK4 NULL aarF domain containing kinase 4 EMBV3_08162 TTGGAGTCCCTGGCATCGCCTCCCGCATCCCCTCAAGCTTGTTGTTAAGACAGGAAGATA Gene GeneID:509256|ELAC2:XM_002695812:158_cdna Constitutive 0 NULL GeneID:509256 19 GENE ELAC2 NULL elaC homolog 2 (E. coli) EMBV3_15939 CCATGTCCACAAATCCGTTCTCTAGTCTGTGTCTACGCTGTTTCCCTGCAGTAAGCTCAC Gene BVV0102_048512 - 1 EMBV3_33737 GK000004.2:107742119-107804448 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19024 CCCTTAGGATTTCGTTTTATTTTTAACAGCAGATACTGGGAGTCCACAACAATTGAAGCC Gene BVV0101_016977 + 0 NULL GK000017.2:30202778-30226427 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19619 GCAGTGTAGACAATTTCTGAGGACTCATCTCCCGGCTTTTCTTGCAGCTGTGAGTGCCCA Gene GeneID:100124511|LOC100124511:NM_001102550:2_cdna UTR3_Alt 2 NULL GeneID:100124511 7 GENE LOC100124511 MGC143377 hypothetical protein LOC100124511 EMBV3_43520 CTCGTCAAAATCACCAAGACTTCTAGTCAGCCTGTTGGTATTTGCCATGGTTCTCTGGGT Variant GeneID:504615|FETUB:NM_001034218:48_cdna 700^801 2 EMBV3_39461 GeneID:504615 1 GENE FETUB MGC128051 fetuin B EMBV3_40494 GGTAGATGGAACCAATGGGCCTTTTTGTCACAAGCATCCTGTAGGTGTATGTTTATGGCA Gene BVV0102_082483 - 1 EMBV3_03275 GK000005.2:58115582-58130096 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18564 ATGCTCTTATCGAGCTTGCTCACCAGCCCCAAGAGGACATTAAGACGGCCACTATGTACG Gene BVT0102_076534 + 1 EMBV3_43511 GK000023.2:31555333-31556332 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134926 1 XLOC_081590 Coding TCONS_00134926 XLOC_081590 Coding Coding HIST1H2BD 23:31547986-31556188 j TSS100497 1711 1 TCONS_00134926_3 126 2 0.791610779173272 0.000742028869814833 2.83156949718838e-05 3.46812822075117e-05 8.53637827657453e-05 0.000119550588382113 4.62578857364855e-05 0.000239355142950636 0.000511228048818197 2.92461119332974e-05 0.000620419443298943 1.56229302943756e-05 1.55778192959891e-05 5.75552848256721e-05 0.000521899278184542 2.25280648126826e-05 0.000526633602229005 8.2650715427407e-24 5.16404452610836e-13 9.14191578825677e-05 0.000503150970290795 5.59137155274196e-06 6.21713924593231e-12 8.57873068097372e-05 0.000117929305976585 4.46193289883659e-05 4.85669855220304e-24 2.15538762676838e-05 8.55801523107109e-05 0.00100343703703153 0.00142916247869669 XM_005223762.1 HIST1H2BD PREDICTED: Bos taurus histone cluster 1, H2bd (HIST1H2BD), 0.0 1548 100.00 0.500876680303916 XM_005249039.1 HIST1H2BD PREDICTED: Homo sapiens histone cluster 1, H2bd (HIST1H2BD), 0.0 686 83.26 0.385154880187025 TCONS_00134926_3 sp|P58876|H2B1D_HUMAN H2B1D_HUMAN Histone H2B type 1-D; 3e-87 254 100.00 0.992063492063492 2 coding 0 0 0 0 -0.046878969903594 0.74495839681669 0.00584842808246362 0.908311696198086 GCTGTGGTGGGAGGTGGGTCTTAACAGTTTCCGTAAAACATGAGGGTAGTACCAGCGAACCGTGGAGTTAAACGGGTAAATCGGCTTGCGCCTAACTTGGTTTACCCTGTGCAAGGCTCACAGAACAGTGCGCTGGTTTGACGTAAACTCCCAACTGCCTCAAATGGCACGATAAAGTCCAGTATAAGTTTGAGAGAAGTAATTCTGCAGATAGACGCTACGTTCTGTAGGGTTTTGTAAACCCCAAATGTGAAATTTAGATGGGTTAGTCATTGAATGGGTTACTTGCATTTTCTTCCACGAGGATATATTGGGACATCAGTATCTTAACCACCATGGATTTTCTAATAATCAGGGCTAATGGTAGGAGACGAAGATAAGGAATGGTGAACTTTATAACAGGGTGACCCAGCCCACAAGCTGGAGTGTCGGCTACAATTATAGTTAGCTGTCCATTGGTTACCTGCCCCGAGGCGCAGGATAATGCTCTTATCGAGCTTGCTCACCAGCCCCAAGAGGACATTAAGACGGCCACTATGTACGGGGCCCGAGCCCATTCTCAGCGTTACACAAGGGAACAGAGAAGTTGCCTTTAGTTACAAACCCAAAACTGGCATGTTCTCAACTACTTGGATCTGGTAGCTGTGAATTACACAATGCAGTTTCCTGAACAGGGTATTTATACTAGCTATGGGTAGCCTAGAGTAGTCCCTGTGATTGGGTCAAAGCAAAGTAACAAAGCAGCCAATGAAAAGGTAGACCTGTTAGAATAATTTACATTCGTGTTTATGACGCCACAATAAAATTAATCCAATCCTGAGCGAAGTCTTACGAACCTCATTTGAATACCGCGTCTATAAATAAATGTGGCCTCACTGGAAGCAACTATTTTCTCAGCTGTCAGTGTAACTGTTGCAGTTTTTATCGGTAAGATGCCTGAACCCACCAAGTCAGCTCCAGCCCCAAAGAAAGGCTCGAAGAAGGCGGTGACCAAGGCGCAGAAGAAAGATGGCAAGAAGCGCAAGCGCAGCCGCAAGGAGAGCTACTCCGTGTACGTGTACAAGGTGCTGAAGCAGGTCCACCCGGACACCGGCATCTCGTCCAAGGCCATGGGCATCATGAATTCATTTGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCGCGTCTGGCGCATTACAACAAGCGCTCGACCATCACATCTAGGGAGATCCAGACGGCCGTGCGCCTGCTGTTGCCCGGGGAGTTGGCCAAACACGCCGTGTCCGAGGGCACCAAGGCTGTCACCAAGTACACCAGCTCCAAGTAAACTTGCCAAGGGTGAGATAAGAGTACAGAGAAGAAATGAATGCAAACAGTTAACAGAAAATGAAAATCTGGCCATAGAAGTTATGAAGTATGATGTCTGATCTGCCTGAAGTAATTGATTATTGTGTATATCCCATTAAAATCCCACCCATCCTGATTTATTGCACATTGATTTACCTGCAAAGGAGAAGGAGATCATTACCTAGGTGGAAGAGCCTAAACAAGGTGTTTTAGCTTTGTCATTTTATTTAAATCATGAAGATAGAATTTATTTCTATCATAGGCCTAATTACTGGAAATTTATTATTTACCATCTACTCACTTAGGTGGGGGAAGTCTAAAGGAGAGAATGGCAAAACATCTGTGAGATTCCACATTTAATAAAATCTGTGGATAACT EMBV3_19847 TTGTTATTAATGAAGATCGTAAAATACCAAATACATATTCAAGAGCGAAAAGAAAGTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30617 CTCTGCAGCTACCCACAATGCACACTCAAGTGCAACAGCCTCGGTGATGTACACAGTCAT Gene GeneID:782513|LOC782513:XM_002688612:389_cdna Constitutive 0 NULL GeneID:782513 7 GENE LOC782513 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_35073 GCACCGCCAGACCATCCTAGAGTCCATCAGGTGGCCGGGCTGACGCTGCTGGCTGTTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25643 TTGAGTTAACACCTCTGCCGCTGCTAAAAGGTATCTTGCAATATATTCAGAACTCTTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41448 GAAAGCACCAAAAGGTTAAGTGGTCCTAAATTTCCAGATTACAGGCGAGTGCTGCCTCCC Gene GeneID:519826|DIDO1:NM_001075794:1135_cdna UTR3_Alt 2 NULL GeneID:519826 13 GENE DIDO1 MGC137821 death inducer-obliterator 1 EMBV3_35902 GTTTGGCCAGAAGCAGGATGCTGTGAACTTAACCCTCATAGATAGCTGGGTGGATATAGC Gene GeneID:520979|AIMP2:NM_001075813:215_cdna Constitutive 2 NULL GeneID:520979 25 GENE AIMP2 JTV1 MGC152188 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 EMBV3_21346 CACGTGTCACCAGTCTCTACTACTGTGAAGTCAGCTGTGCTCTGTCCTGCTCGCTTCCAC Gene GeneID:508226|LOC508226:XR_084548:478_cdna Constitutive 0 NULL GeneID:508226 21 PSEUDO LOC508226 NULL similar to CDC42-binding protein kinase beta EMBV3_05973 GTCTGCCCACGTGGAAGGCTTGACAGCTTTTGATTTTTCTGAGACAAACTTGCAGGTTCC Gene GeneID:100125276|GNG4:NM_001103324:55_cdna Constitutive 1 NULL GeneID:100125276 28 GENE GNG4 MGC151805 guanine nucleotide binding protein (G protein), gamma 4 EMBV3_30539 CCGTTACAGTTTACAAAATGGTAACAGTCTAACTCTGTTGTTCCTTCTTCACGTATCAGC Gene BVV0102_364238 - 1 EMBV3_19042 GK000002.2:116343432-116441986 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21319 CACAAGGGCACAGAGAAACAAGAACTCATTAACAAGCGAAGAGGGAACAGAACTCCGGCC Gene GeneID:507455|SLC44A3:NM_001098900:126_cdna Constitutive 1 NULL GeneID:507455 3 GENE SLC44A3 CTL3 MGC157328 solute carrier family 44, member 3 EMBV3_27793 GGATAGAACCCATTACACATGAGCAGGCTTTAGATGTTAGTGAGCAGGGGCCTTTTGGGG Gene GeneID:541298|IL1RAPL1:XM_002700274:8_cdna Constitutive 0 NULL GeneID:541298 X GENE IL1RAPL1 NULL interleukin 1 receptor accessory protein-like 1 EMBV3_26592 TGGAAGTGTTCAAAATACTGAGCAAAAAGACTAAAAAGGGCCAACCAAACTTGAATTTAC Gene GeneID:615189|CCDC59:NM_001099390:44_cdna Constitutive 0 NULL GeneID:615189 5 GENE CCDC59 NULL coiled-coil domain containing 59 EMBV3_16317 TGGCCTCAGATGTGACCCCCGCTCCGGGGAAAGAGTCTCCCAGGGTGAGCTGGAAATAAA Gene GeneID:514414|DUOXA2:XM_002690943:282_cdna Constitutive 0 NULL GeneID:514414 10 GENE DUOXA2 NULL dual oxidase maturation factor 2 EMBV3_39063 ATCAGGCATGACGGCCCGATTTCCCATTCCCTCCAGTCAGACCGAGCCTAAAGCTGAAGA Gene GeneID:533216|IKBKE:NM_001046345:79_cdna Constitutive 0 NULL GeneID:533216 16 GENE IKBKE MGC137373 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon EMBV3_09712 AGGTCGTTGGACCTGGGCAGAATGTCCTCTGTGACTTCCAGTTTTCCTTTGTTTACGCTC Gene GeneID:511816|SNAPIN:NM_001083410:126_cdna Constitutive 0 NULL GeneID:511816 3 GENE SNAPIN MGC140105 SNAP-associated protein EMBV3_37264 ACATTGAAACCATATATGTATCACTTGCTTTGCCAAATTGCTCACAAAAGCTAGAGAATT Gene GeneID:540878|MGC152575:NM_001102249:11_cdna Constitutive 2 NULL GeneID:540878 16 GENE MGC152575 NULL hypothetical LOC540878 EMBV3_30035 TTCTTATGACCGCCTCCCCCATCACCCTGTCCACCCTGCCTTAGACCCTTTACTCTAGTT Gene BVT0102_446068 - 1 EMBV3_26862 GK000015.2:24815851-24838866 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41365 GAGCCTCCTCCTGTCAAGGGCTCCGATGGAGAAAACAAAAGAAAACGAAAACGTGTGCTG Gene GeneID:537616|POLD3:NM_001167904:31_cdna UTR3_Alt 2 NULL GeneID:537616 15 GENE POLD3 P68 polymerase (DNA-directed), delta 3, accessory subunit EMBV3_30555 TGCCGCCTGCAAACTTCCATGACCTCAAAGACTTCCAACTTGCGTCCCAGTTCGGTTCTT Gene GeneID:515034|IRAK2:NM_001075696:110_cdna Constitutive 1 NULL GeneID:515034 22 GENE IRAK2 IRAK-2 interleukin-1 receptor-associated kinase 2 EMBV3_43664 TGGACTCTGCCATGACTTCTGGCTGCTGGACAAGAGCTGTGCCAAGAGGAAGGACGTGAT Gene BVT0102_194282 + 1 EMBV3_04692 GK000011.2:74174552-74319475 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14358 ATTTGAATGGGGACCAGGATGCTTCTGAAAGTGAAGAGAGACAAACCCAGAGCCTGGAGC Gene GeneID:538802|TMEM171:NM_001014951:139_cdna Constitutive 0 NULL GeneID:538802 20 GENE TMEM171 PRP2 transmembrane protein 171 EMBV3_15452 GGACTGTATAGGTAGATCCAGACGGTATGATGTTGTTTTAGGGGCTGAAGGGGAGAAACG Gene GeneID:616317|STMN1:NM_001034790:284_cdna Constitutive 2 NULL GeneID:616317 2 GENE STMN1 MGC127518 stathmin 1 EMBV3_36040 GACAGAGCCTAGTGCAGACACCTCTTGTTTCAGAAACAGAAAAGGCCAGATGAGCTATAG Gene GeneID:540304|WIPF1:NM_001076923:40_cdna Constitutive 2 NULL GeneID:540304 2 GENE WIPF1 PRPL-2 WASPIP WAS/WASL interacting protein family, member 1 EMBV3_39956 GGGCCTGGTTGAAACAAAGTTGGCAATTATTCCTGGTGGAGAGTCACCTGCCTTGTGAAG Gene GeneID:614716|AUH:NM_001105436:111_cdna Constitutive 2 NULL GeneID:614716 8 GENE AUH MGC140404 AU RNA binding protein/enoyl-Coenzyme A hydratase EMBV3_07035 CAGCCCTTCATGCTGGAGAAAGGTATTTTGAGTTCAAATCAGGTTATCCATCGCATCCTC Gene GeneID:617793|TDRD10:XM_002686014:403_cdna Constitutive 0 NULL GeneID:617793 3 GENE TDRD10 NULL tudor domain containing 10 EMBV3_34953 GATAGCAATAGTAAAAACAGCAGCCCAAAGATCGTATAATGAAAAAAACAGAAGAGTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24438 CTCCTTACACGATGCCCTTTGTGTGGTGAAGAGAGTTTTGGAGTCAAAGTCTGTGGTCCC Gene GeneID:512043|TCP1:NM_001038086:11_cdna Constitutive 0 NULL GeneID:512043 9 GENE TCP1 CCT MGC133746 TRiC t-complex 1 EMBV3_19030 TCTGTTTCCTCACTTGTTTACATTCCATGGTACCTGCTTACATGCTTAGGACTCAAATGG Gene GeneID:539843|ZBTB38:XM_002685040:106_cdna UTR3_Alt 1 NULL GeneID:539843 1 GENE ZBTB38 NULL zinc finger and BTB domain containing 38 EMBV3_03564 CACTGTCTACAGATGACCCAATGCAATTCCACTTCACCAAGGAGCCCCTAATGGAAGAAT Gene GeneID:512748|AMPD1:NM_001100349:47_cdna Constitutive 0 NULL GeneID:512748 3 GENE AMPD1 NULL adenosine monophosphate deaminase 1 (isoform M) EMBV3_26229 TAGACTCTTTTATTCTTTCACGGCTACAGTTAATTTTCATGTCCCCGTGAGCAGAGCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04222 TCTACACCAAAGTGCTCGACTATGTGGACTGGATCCGGGGAGTGATGGGTGAGAAGGACT Gene GeneID:507633|C1RL:XM_002687875:159_cdna Constitutive 0 NULL GeneID:507633 5 GENE C1RL NULL complement component 1, r subcomponent-like EMBV3_02573 TTGGGGCTGAATACAAAGATATGGATTCAGATCTGCCTCTCATGGCCCTCCCCCCATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07898 CCTTAGCCCTCCACAGTCTGTATTTAAGCTGGAGAAACACTGCCTTTTATCTGTCCCTCC Gene BVV0102_168169 - 1 EMBV3_21317 GK000007.2:1602464-1604738 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214987 TCONS_00214985 TCONS_00214986 1 XLOC_130809 Coding TCONS_00214985 XLOC_130809 Coding Coding RUFY1 7:1603165-1658503 j TSS160671 3951 1 TCONS_00214985_2 494 17 0.928908325351935 3.47640325406843e-11 4.34317621659878e-09 1.55085548498009e-08 1.10433846281529e-05 8.91340330683476e-05 0.000134727309035233 1.9324278250979e-12 1.20064707408869e-05 1.3854983090814e-05 5.99766624275593e-05 3.66410017811923e-16 4.91068722233047e-09 1.59986645425212e-07 6.82138550571493e-10 4.15909236443659e-06 0.000438205044685863 0.000117889402280941 0.00155386479061274 2.44864414615088e-11 6.82323953375594e-09 1.13274991101498e-09 2.06350545545665e-08 9.8864617683249e-05 0.000510030146576092 0.000452923348574311 1.48702340365546e-08 1.15159456518568e-07 5.60555198702076e-11 1.52149948792501e-08 2.31438499284201e-09 XM_001790223.2 RUFY1 PREDICTED: Bos taurus RUN and FYVE domain containing 1 (RUFY1), 0.0 6673 100.00 0.93621867881549 NM_001040452.2 RUFY1 Homo sapiens RUN and FYVE domain containing 1 (RUFY1), transcript 0.0 2080 90.48 0.382687927107062 TCONS_00214985_2 sp|Q96T51|RUFY1_HUMAN RUFY1_HUMAN RUN and FYVE domain-containing protein 1; 0.0 889 93.91 0.995951417004049 2 coding 0 0 0 0 -0.00640765982214317 0.967452083970083 -0.0531982288334261 0.733877555785275 GGCCTCAGCCGCCCGGGTGAGGCTGTGACCTCCCGGGGATAGGGGCCGGTTGGCTGAGAACTCCAGTTAATCCGCACCTTCCAAGGGCCAGATGATGGAGGAGCGTGTCAACCTGATGCACATGATGAAACTCAGCATCAAGGTGTTGCTCCAGTCTGCCCTGAGCCTGGGCCGCAGCCTGGATGCAGATCACGCCCCCCTGCAGCAGTTCTTTGTAGTGCTGGAGCATTGCCTCAAACATGGGCTGAGAGGACAGCTGTGGGAAGGGGCAGAGCTTGGCTTTATCTTGCACTCATGCAGAAGAAACTAGCAGATTATCTGAAAGTGCTTGTAGACAATAAAAATCTCTTGAGTGAGTTCTATGAGCCTGAGGCATTAATGATGGAGGAAGAAGGGACAGTGATTGTTGGTCTGCTGGTGGGACTCAATGTGCTTGATGCCAACCTCTGCTTAAAAGGAGAAGACTTGGATTCTCAGGTTGGAGTGATCGATTTTTCTCTCTACATTAAAGATGTGCAGGATCTAGATGGCGGCAAAGAGCATGAAAGAATCACAGACGTCCTTGATCAAAAAAATTATGTGGAAGAACTTAACCGGCACTTAAGCTGCACAGTTGGGGATCTTCAAACCAAGATAGATGGCTTGGAGAAGACTAATTCAAAGCTTCAAGAAGAGCTTTCAGCTGCAACAGACCGAATTTGTTCACTCCAAGAAGAACAGCAACAATTAAGAGAACAAAATGAATTAATTCGTGAGAAAAGTGAAAAAAGCGTAGAGATAACAAAACAAGATACAAAAATTGAACTGGAGACTTACAAGCAGACTCGGCAAGGTCTGGATGAAATGTACAATGATGTGTGGAAGCAGCTGAAGGAGGAGAGGAAAGCCCGTCTGGAACTAGAAAAAGAACTGGAGTTACAAATTGGAATGAAAACTGAAATGGAAATTGCAATGAAGCTACTAGAAAAGGACACCCATGAAAAGCAGGACACTCTAGTCGCCCTGCGCCAGCAGCTGGAGGAAGTCAAAGCCATTAACTTACAGATGTTTCACAAAGTCCAGAATGCCGAGAGCAGTTTACAACAGAAGAATGAAGTCATTACATCTTTTGAAGAAAAAGCCAATCAAGTCATGTCCAGCATGAAACAAGTGGAAGAAAGGTTACAGCACTCAGAGAGGGCGAGGCAGGGGGCCGAGGAGCGGAGCCGCAAGCTGCAGCAGGAGCTCAGCGGGAGGAGCAGCGCCCTGCAGCAGCAGCTTGCCCAGCTGCACGAGCAGTGCGCAAGTCTAGAGAAAGAGCTGAAATCAGAAAAAGAACAAAGACAAGCTCTTCAGCGAGAGTTACAGCATGAGAAAGACACTTCCTCTTTACTCCGAGCAGAGCTACAACAAGTAGAAGGATTAAAAAAGGAGCTGCGGGAGCTCCAGGACGAGAAGGCAGAGTTACAGAAGATCTGTGATGAGCAGGAACAAGCCCTCCAGGAAATGGGTCTGCACCTCAGCCAGTCAAAGCTGAAGATGGAAGACATCAAAGAAGTAAATAAGGCACTGAAGGGCCATACTTGGCTGAAAGACGATGAAGCAACACACTGTAAGCAGTGTGAAAAGGAGTTCTCCATTTCCCGGAGAAAGCACCACTGCCGGAACTGCGGCCACATCTTCTGTAACGCGTGCTCCAGTAATGAGCTGGCCCTGCCCTCCTACCCCAGACCAGTCCGTGTGTGCGACAGCTGCCACACCCTGCTCCTTCAACGGTGCTCCTCCTCCACCAGCTCCTAAGGCAGGGGCCTCAGCAGGGCCTGCTTTCCAGACCAGTTGCCAGCCTATCTTCATCTCTGTGGGCAGCCTCAGAACAGTGCCAAACTCTCTGGGTCTTGAGTTGGTCTGGGACTTGGAAGGTTGGTTTCCAAGCTGGGCTGCTGGCCCTCTGGAACGCAGCACACAGGACTGGAAGCTGCACATGCCTCTCCTTTCCAAGTTGTACAGAATCAACTCCTCTGGATTGAAATTCTCACTTGACACCACCGGCTTTGGTTCAGATGCAACTTCATGATTTTGCTATTATCATTTTTCAATTTCCAAAGAATTAACCTCTTTTGCAACAGCCCAACTAGTTGTAGTAATCAGGTCCTTTTCCTCCCTACCACCCCAGCATGCTTTCCCCTACTTCGGAGTCAAAAAATTCACACCCTTGTGAATATCCATCATTAGCCCTGCAATAAAACTGTTTATTTTTCATTCTGGTATAACGAAGGAGCTTATGTCAGCTTCACAGGATGCCCAGAACAAGCCCCATTTCAGGACTAGAGGCCCTCAGTGAGGGTGGCTGCATCTGAGGTAGAGGCCTGAGCTTGCTGGGTTCTGGGGTGCAGGCTGCTGCCCAGCTGAATAAAGGACAAGCTGAGCTGTCCCCTACACACAACACACACCCCCCTAACTTCCCTCCACCGGTTAATGGCCTTGAGTATTCAGGTTACAGGAGTGTAACAAGTACTCTTAACACAATCAGACAGGTCAGCCCATCTGTATGCAAGGCCTCTTTTTCAGTGCCCGAGTCCACCTCCCACCAGCGTTCTGACCTTGACTGTCCAGCCTCTGCTTGAGAGCCTGGCTCTCTCTTCCTTCTGTACTCTGTCCTAGCACAAGGCACACCCACAGCCTAGCTGATTCCACATCTGCTCACCTAAACACACCGTTACGGATGGGAAACATGGAAGGTTCAACGACATTAGGTCCCAGATCTGTGTGACCAGCCTCCAAAACTGTGTGCCCTGCTTCAAAGCTACATTCATTCCGAAGTGCAGATTTTTGAGTCCTATTTAAGGAAGCACATGGCAGCAAAAAGGGACTTTGTCCTCTTCCCTAACCTAATCTGAGCTTTCTTAACCTCATTCAGGGCCCAACTTTCCCAGCGTTTGCATACCACACTTCCCCCACATGGTCTAGCATTAGATCTGTACCTTGTTCGCAGCGTGCCCAGTTTTTACTCCAACTTGCTGGGGAGCCTTAGGTTAAGTCACTCCTCAGCCTGTCTCATCTGCACACAGAAGGGGAGCAGGATACCTTCCTGCTTCAAGACAGTTCTGACAGTTCCCACCACTACCACACTAAGTGCTCTTCCCTTTATCATCCTGATTTCTTCTAAAACCTGCCCCTGCCCATGCCCCAAGCACTATTCACAAAGAATGCTTGTGCTGGATACTAAGTATCTAGCTGCGGAAAAGAATTTAAGACATCCATTATGTACCTGAACTTTGGAACCCTCAGTTTCTGGTTTGGCAAACTTCTCCTTACTTGGGCAAACAAGGAGGGACAGATAAAAGGCAGTGTTTCTCCAGCTTAAATACAGACTGTGGAGGGCTAAGGGTCATGATAAATGACACCAAGTCTGGAGACTCTGACTGTTCCTAACGAACTCCCAGGTGAAGATGCCGGTCCATGGAGTAGTGTTCGAAAGAAACACAATGTTTCTAGGTATTTTTTCAAGTTTCTTCAACAAAGATGTTCCCTGTTAAAAACCAAAAACTAAAGGACTAGGGAAGATGAAGGGACACTCTCCTTGTGCCTGATTTCCCCTGACACAGACCAAGGAAAGATCTCAAGGGCATTACTAGGTTTAGAACAGTGCATCCCCAGAAAATTCTCTCCAAGCCTGCAGAAGACAATTTATAGAACATTAGAATACTTCTGTATCCCCAACCCAACTGAAGGTATGCACCCAGTTTTCAGAACACATGGAAGGGCAAGAGGATTCAGAGTCCGTCAGTACATCTTCGTGTAGTGCTGCCAACTGCAATCTTCAAGAAGTGCTATCATTCTAAGCAGTTTTTCTACATTCACCATACTAACCACACCCCTTCAGCACTGTCAGCAAATAAAAATAGCTTTGAACAGCACAAGCCTATGTTCACAGCTCCAATTCTGAATTCTAACCTCAATGCAGCAAACTTA EMBV3_42416 ACCTGTGCTTTGAAGAAAGAGACTTTATGCCGGGGGAAAACCACATTGCCAACATCCAGG Gene GeneID:444870|TLR5:NM_001040501:14_cdna Constitutive 0 NULL GeneID:444870 16 GENE TLR5 TLR-5 Toll-like receptor 5 EMBV3_08581 GCAGGGAGGTTATGAGGCTTAATAAAGAAGGGAGAAAGCAAGACAAGAGAAATGAAGGCA Variant GeneID:534448|ATXN7L1:NM_001035407:1_cdna 418^522 1 EMBV3_12823 GeneID:534448 4 GENE ATXN7L1 ATXN7L4 MGC127147 ataxin 7-like 1 EMBV3_06533 AGCAAGATTCCCTGGAGACTTTATCCGTTATTTGTGGTGGTCATTCTGCTTGGCCTTCTC Gene GeneID:535190|TRIM13:NM_001038165:160_cdna Constitutive 0 NULL GeneID:535190 12 GENE TRIM13 MGC134296 RFP2 tripartite motif-containing 13 EMBV3_40248 ATGTGAACTCCGACGACTCCGACGAGATCGTCCTAGCACCGTCTCTGCCCACGAGGAAGA Gene GeneID:618833|IQCE:XM_002698166:644_cdna Constitutive 4 NULL GeneID:618833 25 GENE IQCE NULL IQ motif containing E EMBV3_20581 TGCTGGTCGCCAGGTGAATCGTTGCACATTATGGTTTGAGATGTGCTGGCTCAGGGATCT Gene GeneID:512167|HTR6:XM_002707804:462_cdna Constitutive 0 NULL GeneID:512167 2 GENE HTR6 NULL 5-hydroxytryptamine (serotonin) receptor 6 EMBV3_28615 CCCCAGACCGCGTGTTATTTTGTCTTCTATTCTGTAGCTTCTTGAGTATTTGAACCCCAG Gene GeneID:507157|TMEM59L:NM_001075301:29_cdna Constitutive 1 NULL GeneID:507157 7 GENE TMEM59L MGC140689 transmembrane protein 59-like EMBV3_14626 TAGCAAGTCACCGAAGACAACCCCTGCTCTGGAAGTCTCGAGACAGGATGAGGCAAGCAT Gene GeneID:509061|LOC509061:XR_083914:58_cdna Constitutive 0 NULL GeneID:509061 18 PSEUDO LOC509061 NULL similar to KASH domain-containing protein C19orf46 EMBV3_00835 GAACAGGGACTTGAGCCTTTAAATAGCTCCAGACAAACAAGAATGTCCTTCCTGGGAGCC Gene BVV0101_021367 + 0 NULL GK000021.2:26643316-26811831 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10470 TCGCGCAGCGGAGAAACTCTACCTCGCCGACCCAATGAAGTGTTTGGTGTATAGAACAGA Gene GeneID:527129|SRP9:NM_001115083:62_cdna Constitutive 0 NULL GeneID:527129 16 GENE SRP9 MGC137075 signal recognition particle 9kDa EMBV3_26911 CAAGCAACTAGCTGACATTGGCTACAAGACCTTCTCCACCTCCATGATGCTCCTCACTGT Gene GeneID:768048|C5H12orf62:XM_002687275:150_cdna Constitutive 0 NULL GeneID:768048 5 GENE C5H12orf62 C12orf62 MGC139929 chromosome 12 open reading frame 62 ortholog EMBV3_03406 CGAGTACCAGCTGATTGACTGCGCCCAGTAATGTGACTGCCATCATCTTCGTGGTTGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27579 ATGCCACACTGCACTCGGGAAACCACTGCAAGTTTATCACAAAAGACCTGATGCGAGACC Gene GeneID:532995|LOC532995:NM_001102148:32_cdna Constitutive 0 NULL GeneID:532995 21 GENE LOC532995 MGC155252 hypothetical protein LOC532995 EMBV3_42808 GTGTCCCAGGATAACAAGCAAAGTCAAACACAGAGCTCGGATTCAAAGCCAAGAAAGCGC Gene BVT0102_080087 + 1 EMBV3_35793 GK000017.2:12340190-12582995 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074858 1 XLOC_046444 NonCoding TCONS_00074858 XLOC_046444 NonCoding NonCoding - 17:12382124-12429201 - TSS56608 845 1 TCONS_00074858_2 57 0.22603550295858 3 0.982114028379641 1.61014176129684e-05 2.37832148870452e-05 0 0.00314476188195672 0 0.000173561393660442 0 0 0 0 0 0 0 0 0 0 0 0 1.69726208765748e-05 0 3.59257675521328e-06 0 0 0 0 8.33784182599397e-06 0.000173346895069243 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 8e-46 188 82.56 0.22603550295858 0 noncoding 0 0 0 0 -0.013836607249292 0.912845058907859 0.0106456962981244 0.855022559567113 GCCGCAACACGTGGTAAGAGAGTTGGTGGGTCATCGGATGCAGGACCTTGGTGACAGCCACACAGCACACTGGTGAAGATAAGATTTGTGCCTTAGCGTAGCTGTGTGTCCCAGGATAACAAGCAAAGTCAAACACAGAGCTCGGATTCAAAGCCAAGAAAGCGCCTGTCTAAAGACTTTAAAAATGCACGCTTCGAACTGTCGCATCATTATTTGAATTCATTGACAACAAACCAGAATATGGACCCATCAGTTGAGCCTCCCTCAGTTTTTGAACTGACCCCACTTTAGTAACAACTGAGTTTTCTGCACAGAGCAAGAGAAGAGGAAGCCATCACTCTCAGCCCGATTTTATATCATCTCTCTCTTTCCGACTATAAAAATGCTCCATGCTTTTTTAGTATTTAATTCACGAAGTTAAGATGAAAAATTTCGTCGTAGTCAAAAAAAATGTGATCATGTTTAACTCACATTTTTTTCTCCTGAGTGTGTGCTTTCTCCATGCAAACAATGGAAAGGATTGAATTTGGAAACAAAAACCAAAAGAAAGCTCTTTGGATTATACCTGGAGATTATACTTGGAGACGGTACTGAAGAACAGGCTTCGACTGCATTTATTGAAAGGTTGTGGGTGTGTGTGTGTGCTCAGTCGTGTCGGACTCTTTGCAACGCCATGGACTGTAACCCACCAGTTCCTCTGCCCATGGAATTTTCCTGGCAAGAACACTGCAGTGGTTGCCATTTCCTACTCCAGGGGATCCTCTCGCCCCAGGGATCGGGCCCACATCTCTTGCATCCCCTGCATTGGCAGATGGATCATTTACCACTGTGCCACCTCATCCCTT TCONS_00076664 r 5' 41749 TCONS_00076664 r 5' 41749 EMBV3_25639 TGGGGGCAACCGGAAACGCTGGATCATTGCCACAGAAAACATGAAGGCTGGAGACACAAT Gene GeneID:514403|MRPL2:XM_002697248:448_cdna Constitutive 0 NULL GeneID:514403 23 GENE MRPL2 MGC134061 mitochondrial ribosomal protein L2 EMBV3_05194 TTATAAGCATTTTTTAGCAGTAATTTGTACATATTTTAGAATTTGTGTATCTGCTTTGTA Gene GeneID:540396|HIVEP2:XM_002690289:11_cdna Constitutive 2 NULL GeneID:540396 9 GENE HIVEP2 NULL human immunodeficiency virus type I enhancer binding protein 2 EMBV3_28240 CCGGCGCCTCTACGTGGGCAACATCCCCTTGACGGCATCATCTTCCAGGGCCAGTCGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01585 TGGATGACACCATCGGGATCCACCCCACGTGCGGAGAGGTGTTTACCACCTTGGAGATCA Gene GeneID:319097|TXNRD3:XM_002697151:88_cdna Constitutive 0 NULL GeneID:319097 22 GENE TXNRD3 NULL thioredoxin reductase 3 EMBV3_13948 GAAGCACAGGATTTCTCTCCAGCCTGACTTCAACATTGAATGAGGTGCAACATACAAATG Gene BVT0102_085154 - 1 EMBV3_04410 GK000018.2:47044485-47062552 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083508 TCONS_00083509 TCONS_00083511 TCONS_00083510 TCONS_00083512 1 XLOC_051292 Coding TCONS_00083512 XLOC_051292 Coding Coding ZNF146 18:47044941-47063865 = TSS62748 2325 1 TCONS_00083512_3 292 3 0.87729218411457 1.75556891886149e-05 7.51280562682671e-05 1.37092026327776e-05 0 5.93603590684104e-09 0 3.29836376147615e-10 7.91044579287304e-09 8.84925181251965e-09 7.59632867888221e-12 1.95259527008218e-09 6.14521752962025e-10 0.000146651747129056 7.58682097533712e-06 3.2722133361176e-05 0.00536987431973836 0.0055359339516745 0.00244635308828078 7.35139395375263e-09 1.15990307132421e-05 1.95867572839257e-09 0.000380171882329736 0.00132484304694984 0.0045894504697327 7.28794032206032e-35 6.75631155045278e-20 8.73030993096741e-05 0.000162145848114464 0.000188963597369211 4.08958227943024e-65 XM_003583412.2 ZNF146 PREDICTED: Bos taurus zinc finger protein 146 (ZNF146), transcript 0.0 4168 99.74 0.999569892473118 NM_007145.2 ZNF146 Homo sapiens zinc finger protein 146 (ZNF146), transcript variant 0.0 1938 80.71 0.874838709677419 TCONS_00083512_3 sp|Q28151|OZF_BOVIN OZF_BOVIN Zinc finger protein OZF; 0.0 584 99.66 0.996575342465753 10 coding 0 0 0 0 -0.00574250182394614 0.967609005290488 0.0284980775295165 0.601877785009627 GGCGCAGCGCACCGAGTGGACATTTTGGTCTTTGTCCGCGGGTCAGTCCGGCCCCTGGGTCCACGTGGCGCGAAAATAGGAGGGTCATTTCCTTGTGCACCGTCCTCATCCTTCAGAAGGCCGGGAGGCCCCAGGGCTCAGCCGAGTTCTAGGAGAGAACTTTGGCTCCAGCATTAACATTTTAGTGCTGTGTCATTTCCCCAGTAGCAGGTTGTGAACTGATCAGGCTGGATGTGATCCTCTGTTGAAGCACGAAGACGAACTCTGGATGGTGGAGAAAGAAGTGGAAAGGAAGTTTGTTCAGAAGAAGCTTGAGAAGATGATGAACGGATAGATTGACAAGACTTGGGAGACAAGTTGCATCCAGCTTCAATAAAGTACAGACAGAAAAAAAGCAGTGACTAAGAAAATTGGAAAAGTGCTTCCTCTGATATCAGACTATCTTTTAAGGGAACAACTTTTTCAACCTAGAGTTTGAAACACAATTTAGAGTTAGTTGTGTAGGAAAGAATCATCAATTTAGATTGTGTGGAAATCTGCCACAGCTTACTCCTTGTAGTAATAATAACCCTTTTTGTAAAAGGGTATAAAATCAGTGTGGAAATGCCTTCATTAAAAATTTGAATCCCACATGATATCAGAGCATTCATACTGGAGAGAACACCTATGAATTTACTGAATGTGGGAAAACTTTCATTTGTATGTTGCACCTCATTCAATGTTGAAGTCAGGCTGGAGAGAAATCCTGTGCTTCTAAAGAATATTGAAAAGCCTTTACCTAGATAACATCTCATTGAGCAGAAGAAAATTCATACTGGAGAGAAGTCAGTGAAGGTTATAAATCTTCACTGAATATTTTAGAAAATTTAGAGTTAGAGAGCTCTGAATGTACTGATTATGATAAAGTTTTCTCTTGAACCTTATCTCTTACTCTGTATTCGAAAGGCCATACACAGAGAAGCCCAGCACATGTAAGAAATGTGGAAATACCTTCAGCTAAAAGTAAATTTTCATTTATCAAAAAATTCATACAAGAAAGAAACCTTGTGAATGTGGGAAAGCTTCCATTCAGATGTCACACCTCAGTCAGCAGAGAATTTGTAGTGGGGAAAACCCCTTTGCCTGTAAGGTATGTGGGAAAATCTTCAGCCACAAATCAACTCTTACTGAGCATGAGCATTTTCATAATAGAGAGAAACCTTTTGAATGTAATGAATGTGGAAAAGCATTCAGCCAAAAGCAGTATGTCATTAAACATCAGAACACCCATACTGGAGAGAAGCTTTTTGAATGTAACGAATGTGGAAAATCCTTCAGCCAGAAGGAAAATCTTCTTACCCATCAGAAAATTCACACTGGAGAAAAACCTTTTGAGTGTAAGGACTGTGGGAAAGCTTTCATTCAGAAGTCAAACCTCATCAGACACCAGAGAACTCACACAGGAGAGAAGCCCTTTATATGTAAGGAGTGTGGTAAAACCTTCAGTGGCAAGTCAAACCTTACTGAGCATGAGAAAATTCATATTGGAGAGAAACCCTTCAAGTGTAATGAATGTGGAACAGCTTTTGGTCAGAAGAAGTACCTCATAAAACATCAAAATATTCACACTGGAGAGAAACCTTATGAATGTAATGAATGTGGAAAAGCCTTCTCTCAGCGAACATCACTTATTGTACATGTGAGAATTCATTCAGGTGATAAGCCGTATGAATGCAATGTATGTGGAAAAGCCTTCTCTCAAAGTTCATCTCTTACTGTACATGTGAGAAGCCATACAGGTGAGAAACCCTATGGTTGTAATGAGTGTGGGAAAGCTTTCTCGCAGTTCTCAACCCTTGCTCTACATTTGAGAATACACACAGGTAAGAAGCCTTATCAGTGTAGTGAATGTGGGAAAGCTTTCAGCCAGAAGTCACACCACATTAGACACCAGAAAATTCATACCCATTAAAACCCTGTGGATATCATGAAAGGTGTTCATCAGGAATTTACACCTTACAACACATCAGAAATAAGGAAGGCATCACAAATGAGGGAAGCAAAAGCTAAAAACTTAAAGGACACCAGAGAATTCATCTTGAAGAGAAAGACATTTGTATGATTGAAGTCCTGTATCCAATAAAAACCATACTGCAAAGGTAATACTGAAAACTTAAGATGCATTTCCACTAAAATTGGGAGTGGAGGACATTTTTATGATTGCCATCTGCATGAATCTGGAGATCTTCACCAGTGTAATAAAAACAAAGCTATAAGCATTAGAAAGAGACTTCTATGGTATTGATTTAGCAGAACAGAAGAGATTCTGCAAAACCTATGCATTTA EMBV3_28438 GTTCTGCATAGGAGTCTCCCTCCATCACATCTTACATTAAGGTCACGTACACTCACCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40059 TCTTCTTCGGGCTTGTTCTGGCGCTCATCGGCCTCATCTTCCTTATGGTGCTCTACCTAA Gene GeneID:786625|LOC786625:XM_002693467:58_cdna Constitutive 0 NULL GeneID:786625 15 GENE LOC786625 NULL similar to hCG1820409 EMBV3_26761 TATCTACTTGGGGAGTTTTTTGCATGCAGTAGGGAGCAGAGTCCGCTTGGGAGGCCGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11900 GAGCAAACAACCTTCATCTGTGTGTGCATCGCGGAGTTCCTGTCCCTGTATGAAACCGAA Gene GeneID:504586|ASNA1:NM_001098864:20_cdna Constitutive 1 NULL GeneID:504586 7 GENE ASNA1 MGC159838 arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) EMBV3_31525 GAAGGAGAAAAGTGCCCCGGATCCTTTCAGGGTTAATTTATTCAAAAAGGAAATCGAAAA Variant GeneID:768059|TCEAL8:NM_001077116:51_cdna 79^150 1 EMBV3_19728 GeneID:768059 X GENE TCEAL8 MGC127842 transcription elongation factor A (SII)-like 8 EMBV3_18848 GAGTGGTCCCTTTCCTTGCTTGAGCCTCCACTCCTTGGTTCCAGCTCCATACTGAATTTC Gene GeneID:511167|NRM:NM_001037596:90_cdna Constitutive 1 NULL GeneID:511167 23 GENE NRM MGC134557 nurim (nuclear envelope membrane protein) EMBV3_11422 CTTTACATATTCAGAAGCTGAGGCGTACGGCGGATAGAGCTTACTCACTGCAAGTCACAG Gene GeneID:513714|KRR1:NM_001037819:5_cdna UTR3_Alt 2 NULL GeneID:513714 5 GENE KRR1 MGC128669 KRR1, small subunit (SSU) processome component, homolog (yeast) EMBV3_27176 CCTTCGCCACAAACTCTTTCGGATCCAACTTGCTAATTAAAAGCTCCCAAACTCCCACAG Gene BVV0102_314628 - 1 EMBV3_27131 GK000010.2:76109268-76151135 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022260 1 XLOC_012930 NonCoding TCONS_00022260 XLOC_012930 NonCoding NonCoding - 10:76109505-76111189 - TSS16150 1684 1 TCONS_00022260_1 103 0.114608076009501 1 0 0.000153508485661724 0.000393822248140628 8.79239831331247e-05 4.93119997118718e-06 4.39772164506825e-05 0.000233655402578384 0.000169687006403105 0.000207226069280357 7.49656190861744e-05 0 0 0 0 0 0 0 0.000128164906811904 0.000372489599460672 8.51654313241242e-05 6.40566959602595e-05 0 0 0 0.000547539659086109 1.23428910622495e-05 4.18377582821068e-06 0 0 1.72967213033474e-05 0 XM_005198818.1 ANKLE1 PREDICTED: Bos taurus ankyrin repeat and LEM domain containing 1 (ANKLE1), transcript variant X1, mRNA. 2e-11 75.2 92.16 0.0296912114014252 0 noncoding 0 0 0 0 -0.638701848616341 0.040266294140975 0.0308829554531958 0.651243851594107 GAGAGGAACCCGGATGCAGCCGCGTTCTCAGGCCGCGCTGCCGCCGCTTCCGCCAAGCAGTAGGGTAGGCCGAGGAAAAGAGCTGCTGCAGCGACTAGGCCTAACTGGAGCTGCTAAAGCTCGGGAGGTGTGCAGCGGACAAAAATACGAAGGGTTTCTGTGCAGTGCGGAACCTCTGGGCGGCGGTCGTCTGCAGCTTGAGGATTCCGAGGGCAAGGGTCGGGTAATTCCCGGCCCTCGATTCCGCCCTTTTCAGCCGCGAGACTGGCCCTTCTGGGCTCGAGTAGTCCACTCGCGACGGGAACCAGCGCCGCTGCTCGTGTAAATGGGCCCTTCGCGGCTCGCGGCCGTAAACCCCCAGCAGTCGCTCTCCGCTCCACCTTGTGGGAGGCCTGGCACCGAAATCCGAACCCCTGGGGCCCGGCCAAGGGTTGGATATCGCTTCGAATTCTCTCTCGTCCTCGTCTCCTTTTTCCTGAACCTCTTTTGAATGTCAGCTCTCTGGAGCTGCTGCAAGCCTGGTTGGGGCCAGGTCGGTGTGGCGGGCGCAGGTGGGAACGCTGTCTCTAAGCCCCGAGATCATTTACTGAGAACCGCCGCTTGGGCTCACCCGCTGCACGGAGCTCAGGGAAATCCAGCTCCAAACTGTGGGAGTTTGGGAGCTTTTAATTAGCAAGTTGGATCCGAAAGAGTTTGTGGCGAAGGCTTCACTTAACTCTAGCTGGAACAAGTGATTAAATATTTAGAGAAATGGTTGCATTCTTAGTGAGCCCTAGGCCAAGTGGTGAAGTCCAAGGGGTCTCAAAGAGTCGGACACGACTGAGTGACTGAACAGGCGACGTGGTGCATTACCAGATAATATTCTTGAACCGTTGCTCTATTCGACTGCATGCTACATTTGTCTTTTGAGAGGGTGAAAAAAAAAAAAAAAACTCTTAAGTACAAATGCCAAGGTACCAAATGTTCAAAACTTGGAAAATGAGAAAAAAAAAATAGCATTTATAATCATTGAACCCAGGGACAACCACTGTTCGCATTTTGATGTGCTTCTCTCCAGCATTTTCTTCCTTAAAATTTGTCTATTCCGTTCTGTAGACTTTTAATTTTTCCACTTGGCATTATATCGTGTTTTCCATGTAAGTAAAACTGTACCATGCATACAACTAACAGCAGGAAAAAGAAATGCTTTTATTTCTCTTGTTTGTGTTGTTTAACACTCAAGCGTTGCAAATTTCTATGCATATCCCCAGAAATGAGTCTTGAATGAAAAAAAAATTTGTCATTAAAAAAAATTTTAAGTGATATAGGAAGCCGAAAATGTTGGTGCTCTTAGACGGAAGCGGGCTTCCCCTACTGGCTCCAGATGATTGGCCACTATAGGTGGTGTCTGTGTTTGCTCTGAAAAGTTCCATCTCCCCTAAGCATTATAAAACTGGCTAGAATACCAGTCTCCCTCCCACCTTCAAGCAACTTGCATTTCCACATCTCAATTTCCCATACCAGTCTTCATGAAAAATTCAGTGTCCCAGCCATGCAGTACTTCTTTGCTCAATTTCTGATTAAGGGTAAATGTAGAATTTAAACCAGAGAAGATTTTAAAACCAACTCAGTTTCCCTTGGCAACAATTGAACTGTCAAAGAGTAGTGCTTGTTTGAAATGCTCACAGCTGTTGCTTAGAATATT TCONS_00017889 . 5' 143 TCONS_00017889 . 5' 143 EMBV3_06307 TCCATGCTTGCCCGGCTTCTTCGGAATACCATTGGAGCCCTGAACACCTCCTCTGAGATG Gene GeneID:521797|DCST1:XM_002686011:394_cdna Constitutive 0 NULL GeneID:521797 3 GENE DCST1 NULL DC-STAMP domain containing 1 EMBV3_37023 CCGCGCAAACAGAACGTTAGACTTTTCTTTAACATTGACCAAGAACTGCATGGACCTAAC Gene GeneID:280831|JUN:NM_001077827:4_cdna Constitutive 0 NULL GeneID:280831 3 GENE JUN NULL jun oncogene EMBV3_04032 TTCACAGCTTCTACTACATCTACTGTGTACGGTGGAGCATCCCAACTGCTCGGAGACCCA Gene GeneID:100296237|LOC100296237:XM_002699482:81_cdna Constitutive 0 NULL GeneID:100296237 X GENE LOC100296237 NULL similar to Testis-specific A-kinase-anchoring-protein EMBV3_12456 TGGCTCATGAGTGGTGGAGAAATTGAAAGTATATCGTTTGAAGATGTGGCTGTGAATTTC Variant GeneID:782885|ZNF605:XM_002694442:16_cdna 87^247 2 EMBV3_34643 GeneID:782885 17 GENE ZNF605 NULL zinc finger protein 605 EMBV3_12078 CTGGAACAGATGCAGAAGGACCCCCAGGCGCTCAGCGAACACTTAAAGAACCCTGTGATA Gene GeneID:540098|STIP1:XM_002685655:401_cdna Constitutive 0 NULL GeneID:540098 2 GENE STIP1 NULL similar to Stress-induced-phosphoprotein 1 (STI1) (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521) (NY-REN-11 antigen) EMBV3_07525 GGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTG Gene BVT0102_063348 - 1 EMBV3_04675 GK000017.2:51874763-52565555 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00218178 TCONS_00010367 TCONS_00098838 TCONS_00019963 TCONS_00037938 TCONS_00019989 TCONS_00022064 TCONS_00244651 TCONS_00166080 TCONS_00224115 TCONS_00250553 TCONS_00229820 TCONS_00135549 TCONS_00231277 TCONS_00165811 TCONS_00136829 TCONS_00129726 TCONS_00197449 TCONS_00249014 TCONS_00031938 TCONS_00064816 TCONS_00198626 TCONS_00020176 TCONS_00198800 TCONS_00221437 TCONS_00177994 TCONS_00251889 TCONS_00210178 TCONS_00148277 TCONS_00017462 TCONS_00023334 TCONS_00117178 TCONS_00048822 TCONS_00244653 TCONS_00152648 TCONS_00198662 TCONS_00222772 TCONS_00055859 TCONS_00250261 TCONS_00244654 TCONS_00056147 TCONS_00141422 TCONS_00207067 TCONS_00254568 TCONS_00249913 TCONS_00107792 TCONS_00197973 TCONS_00032586 47 XLOC_142855 XLOC_131641 XLOC_005918 XLOC_059082 XLOC_010641 XLOC_021767 XLOC_010667 XLOC_012735 XLOC_150512 XLOC_100918 XLOC_137411 XLOC_153496 XLOC_139314 XLOC_081772 XLOC_140766 XLOC_100651 XLOC_083040 XLOC_078439 XLOC_119110 XLOC_151957 XLOC_018183 XLOC_039540 XLOC_120280 XLOC_010854 XLOC_120453 XLOC_134752 XLOC_107767 XLOC_154830 XLOC_128688 XLOC_090159 XLOC_009039 XLOC_014001 XLOC_071344 XLOC_028953 XLOC_092413 XLOC_120316 XLOC_136079 XLOC_033667 XLOC_153204 XLOC_033950 XLOC_085850 XLOC_125586 XLOC_157500 XLOC_152856 XLOC_063702 XLOC_119632 XLOC_018826 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_11996 GAGTAAGCCAGAGGACAAGCAAGAGTGAGTCCCTGTAACCAAAGATGAACAGCATCACCC Gene GeneID:513116|DDHD2:NM_001075598:62_cdna UTR3_Alt 2 NULL GeneID:513116 27 GENE DDHD2 MGC139315 DDHD domain containing 2 EMBV3_37606 GGGACAGTCACCTATGATATAGACACAGAGAGAGTTTCTTTAGGCTCGATCTAACAAGCC Gene GeneID:507055|LOC507055:XM_002686269:97_cdna Constitutive 0 NULL GeneID:507055 3 GENE LOC507055 NULL similar to guanylate binding protein 4 EMBV3_03414 GTAGGAAATATCTATAGAATCAGGTAAAACTAAAAGACTTCACCATGATTGCCCTGCCTG Gene GeneID:337919|MUC15:NM_176631:14_cdna Constitutive 3 NULL GeneID:337919 15 GENE MUC15 NULL mucin 15, cell surface associated EMBV3_09943 TGCCGTTTTTACTCATTAAGCCAAGGGGATGGTGAACATTTTGCACACCCAGCGTCAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07527 GCCCAAAGGTTGCACAGCTCAAAGGTAGAGGAGTGAGGATTTGAATCTGGGTAGTCTCTG Gene BVV0102_070142 + 0 NULL GK000002.2:136491546-136525536 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34994 GTGGTCGTCATCACCTTATTCTGGTCCAGGGCTGGTGGCAGCGCTCTCTGTTACCCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35437 CAGAACTTGAGTAGTGGGAAATGAGAAATAGAAGAAATGCAGTAAAGCCAGGGAATTCAG Gene GeneID:281600|ADAM9:XM_002698719:156_cdna Constitutive 0 NULL GeneID:281600 27 GENE ADAM9 NULL ADAM metallopeptidase domain 9 (meltrin gamma) EMBV3_02767 TTTGATATGTCAGGCACTGTGCTGAGAGCTTGTTGTTCAGTCTCTAAGTCGTGTCCGATC Gene BVV0101_076139 + 1 EMBV3_28106 GK000015.2:73717840-74127287 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00875 GGATGCTTTTTGTTCCTGCTCCTGTTCCTGTTTTTGGTTGGGAGCTCTTGGTGACCTCTG Gene GeneID:508519|NPLOC4:XM_002696115:208_cdna Constitutive 0 NULL GeneID:508519 19 GENE NPLOC4 NULL nuclear protein localization 4 homolog (S. cerevisiae) EMBV3_26989 CTGTAAAGGACCAGGCAGGAATGTGAGCATGACCACGGCACACCTCGACCCCCAAGGGAG Gene GeneID:338031|FLT4:XM_002688493:85_cdna Constitutive 0 NULL GeneID:338031 7 GENE FLT4 NULL fms-related tyrosine kinase 4 EMBV3_19298 AAGGTGTTTCATCCAGAAAAATTTTACTGTGCCTGTAAATGTTCCATAGAATCCACAAGC Gene GeneID:539718|SCN2A:NM_001144109:127_cdna Constitutive 2 NULL GeneID:539718 2 GENE SCN2A SCN2A1 sodium channel, voltage-gated, type II, alpha subunit EMBV3_41929 TCGCCATGAAGCTCCATACCTGTTCCAGAAGTGGTGTCGGGATGATGTGCTCATTGAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03831 TTGTTTGAAATACGGCCTGACCGTGCATAACGTGCTGCGTGTGCGCGTCGTCTCCATCGA Gene GeneID:100300686|LOC100300686:XM_002683888:2_cdna Constitutive 0 NULL GeneID:100300686 Un GENE LOC100300686 NULL similar to CG3835 EMBV3_41196 AATAAACATCAAGCAAGTCCCATTCATCAGGCACCAACTGTGCATATGGCGCTCACACGC Gene GeneID:528741|KCNQ4:XM_002686538:759_cdna UTR3_Alt 2 NULL GeneID:528741 3 GENE KCNQ4 NULL potassium voltage-gated channel, KQT-like subfamily, member 4 EMBV3_42635 ACTGTTCAGCTCTTATTCAACATCAAGGAACCCACACTGGGGAGAAACCTTACAAATGTC Gene GeneID:522837|LOC522837:XM_002698143:533_cdna Constitutive 0 NULL GeneID:522837 25 GENE LOC522837 NULL similar to Zinc finger protein 135 (Zinc finger protein 61) (Zinc finger protein 78-like 1) EMBV3_34809 GGCTGGCAAAGGTTTCCCGCGCCCTAGCTTAGGTCCCATCCGACAAGATCAAAGCTGCAA Variant GeneID:614347|ANAPC13:NM_001113234:2_cdna 53^358 1 EMBV3_25245 GeneID:614347 1 GENE ANAPC13 MGC137060 anaphase promoting complex subunit 13 EMBV3_41086 AGGCCATCGTGAACGAGCTCCTGCATCTGGGCATAGCGGAGCTGCCAGAGAAGGTGTTTA Variant GeneID:617037|PECR:XM_002685568:10_cdna 131^212 1 EMBV3_07143 GeneID:617037 2 GENE PECR NULL peroxisomal trans-2-enoyl-CoA reductase EMBV3_35219 ATGGCGTGTGTGGCTCTGGCATCATGGGAAGGTCTGGGGAAATTCTGTTGCTGTCAATGT Gene BVV0102_139479 + 0 NULL GK000018.2:65211385-65220692 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02707 GCACTCTGGAGGGAACCAACAGTAGAATAACTGAGGCAGAAGATAGGATAAGTGAGGTGG Gene BVV0101_004572 + 0 NULL GK000003.2:95045117-95123423 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089138 TCONS_00250442 TCONS_00129726 TCONS_00219680 TCONS_00008105 TCONS_00254112 TCONS_00249292 TCONS_00166654 TCONS_00161953 TCONS_00255185 TCONS_00008096 TCONS_00116906 TCONS_00037923 TCONS_00239899 TCONS_00238344 15 XLOC_053924 XLOC_153385 XLOC_078439 XLOC_132999 XLOC_003665 XLOC_157050 XLOC_152235 XLOC_101490 XLOC_098837 XLOC_158117 XLOC_003656 XLOC_071072 XLOC_021752 XLOC_146564 XLOC_145011 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_15552 AATGCCCAGCCTGGAAGTGATCACCCTCAGCAGCGACCAGGGGCAGCTTGGCCTGAAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03601 CCACCACTCACCTTAGAGTCGTTATGTTAGAAACCAACTTCCCCAGACCCAGGAGAGAGA Gene BVT0102_121207 - 0 NULL GK000005.2:109505739-109564500 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193308 TCONS_00193320 TCONS_00193314 TCONS_00193315 TCONS_00193303 TCONS_00193300 TCONS_00193321 TCONS_00193311 1 XLOC_117434 Coding TCONS_00193303 XLOC_117434 Coding Coding CECR2 5:109347688-109556559 j TSS144492 6709 1 TCONS_00193303_7 1196 20 0.967975295638435 0.0116558691349619 0.00544490697747369 0.00809950453584012 0.00333311210008048 0 0 0 0.00292613367603308 0.00423051369981482 0.000373615765582891 0.000129755168760726 6.65684684718847e-06 0.000612124547066535 0.000599062668072432 0.000518032531725879 5.09205512977875e-05 3.24245766314453e-08 3.39856101214664e-08 0.00524589234362027 0 0.00356050668111794 0.000370090752400032 9.30085971366929e-05 2.8716711490505e-05 0 0 0.00745706168880619 7.42446584220857e-11 1.42829293151243e-40 7.53081571941528e-08 XM_005198500.1 CECR2 PREDICTED: Bos taurus cat eye syndrome chromosome region, candidate 2 (CECR2), transcript variant X1, mRNA. 0.0 1.180e+04 99.28 0.983007899836041 NM_001128151.1 Cecr2 Mus musculus cat eye syndrome chromosome region, candidate 2 (Cecr2), mRNA. 0.0 1124 72.99 0.28826948874646 TCONS_00193303_7 sp|Q9BXF3|CECR2_HUMAN CECR2_HUMAN Cat eye syndrome critical region protein 2; 0.0 1592 67.78 0.999163879598662 1 coding GAGAGTCCTGGGAAGAAGGAAGGAGGTGGGTGTACCGGGAGGCACCAGGGTCAGTGATCCAGGTCTCAGGAGGCGCTGTGACTACCAGGCTGGGGCCCAGATCACCGAGGGACAGGAGTTAGAAGCAGCTCTCCACAGAGATGACGTGGAGTTCATCAGCGACCTGATCGCCCGCCTGCTCCAGGGCTGCTATCAGCGAAGGGACATCACGCCTCAGACCTTCCACAGCTACCTGGAGGACATCATCAACTACCGCTGGGAGCTGGAGGAGGGGAAGCCCAACCCTCTGCGGGAGGCCAGCTTCCAGGACCTGCCCCTGCGCACCCGAGTGGAGATTCTCCACCGCCTTTGTGACTACCGGCTGGACGCAGACGACGTCTTCGACCTCCTCAAGGGCCTGGATGCAGACAGTCTCCGCGTGGAGCCGCTGGGCGAGGACAGCTCGGGGGCCCTCTACTGGTATTTTTACGGAACGCGAATGTACAAGGAGGACCCGGCACAAGGGGGTTCCCATGGAGAGCTCGCTCTGAGCAGGGAAAGTGAAGGACAAAAAAATGTCTCAAGTGTTCCTGGGAAAACAGGTAAAAGAAGAGGAAGACCCCCAAAACGGAAAAAACTACAGGAGGAAACTTTCATGAGTGACAAGCAGGAAGAGAACTCCTCAGCATCTGAGTTGCAGACAAGAAACGGGTCCCAGGGACCAGGGCAAGGCTCCTGGTGGCTCCTGTGCCAGACTGAGCAGGAGTGGAGACAGGTCACCGAGAGTTTCCGGGAGAGGACCTCTGTACGAGAGCGCCAGCTCTACAAACTGCTCAGCGAGGACTTCCTGCCTGAGATCTGCAGCATGATCGCCCAGAAGGAGACCCCTGTGCTCAGCAGGCTAGAGAAACAGAAGCGCCGGGAGGAGGAGGAGGAGCGCCAGATCCTTCTCGCGGTGCAGAAGAAGGAGCAGGAGCAGCTGCTGAAGGAGGAGAGGAAGCGGGAGCTGGAGGAGAGGGTCAAGGCCGTGGAAGATCGAGCCAAGAGGCGACGGCTCAGGGAGGAGCGGGCCTGGCTGCTGGCCCAGGGCAAGGCGCTGCCCCCCAAGCTGTCCCACCTGGACCCCCAGTCCCCGCCTCGGGCCGAGAAGAGGACGAGAGACCCCTTCGAGCTGGATGATGACTTCACCGCCATGTACAAAGTTCTGGACGTGGTGAAGGCTCACAAGGATTCCTGGCCCTTTTTGGAACCAGTGGATGAATCGTATGCCCCTAACTACTACCAGATCATTAAGGTCCCCATGGATATTTCAAGCATGGAGAAGAAACTGAATGGAGGTTCATACTGTACCAAGGAGGAGTTTGTGAACGACATGAAGACTATGTTCAGGAATTGTCGAAAATACAATGGGGAGAGCAGCGAGTACACCAAGATGTCGGACAACCTGGAGAGGTGCTTCCACCGGGCGATGCTGAAGCATTTTCCTGGGGAGGACGGGGACACAGACGAGGAGCCGTGGATGCGGGAGGAGGAGAGGCGGGAGAAGAGGCGGGGGCGGGGCGCGCGGGGCCACGTGTGCACCCGCTCCCGGGACTCGGAGGCACTGGGCCGGAGGCAGCCCGCGGAGAACGGAGGGAAGGCGCTGCCCCTGGGCCGCCGTGCCACTGCCTCTGGGGCCGGTCAGAGCAGCTCCGTTCAGCCCCCTGGCCAGAGGCCAGCAGGACAGGGAGCGTTTTGTCCTCTCCGGGGGTCGGATCCTGCTGCAGTCAGTGTCTCCTCTGGAGCCCCGGGCCTGCCCGCCCGTGGGCCTGGCCTGCAGCCCGCGCCTCTGGCGGTGCAGCCTCCAGCTGGAATTAACCACCACCGAGGCCCCGGGTGTGGCCCCCCTGATGAGAAGCTGGCCTGCGGAGGGCTGGCCTCCCTTGCTGACATGGGCTCTCGACCTGGACCCTTGCCGCTCAGTCAGATGAGCGGCCCCAGCCAGGATGGGCGCGTGTATCCCCCAACTCATTTCCAGCCAGGGCTCCTTCCTCCCAGGCACGGGGGTGCTCCAGCCCGACCCCCAGACTTCCCCGAGAGCCCAGAAGTCCCTCCCAGCCACATGTACCGACCCTACAAGTACCTGAGCCGAGTGCACTCTGCGGTCTGGAATGGGAGCCACGGTGCTGCAAACCCAGGACCCTTGGGGCCAGACGAGAAGCCCCCCGTGGGGCCAGGACCTTCTCACCAGCCCCGCCCTTTGGGTCACATGATGGATTCCCGAGTGATGAGACCTCCCCTCCCCCCAAACCAGTGGACAGAACAATCCGGCTTCCTACCTCACAGCGTTCCTCCTTCAGGGTACCTGCACCCCCCGTGTAAACCTGGCGCACAGCGGCTCCAGCCCCCTGCAGCCCCGGCACTGGGTTCTCTGTTTGGAGCTCCGGCCCCAGCCCTGCGGGGCGTGCAGGGTGGGGACTCCATGCTGGACAGCCCTGAGATGCTGGCCATGCAGCAGCTCTCCTCCCGTGGATGCCCGCCAGGCGTGCCTTACCACCCCCGCCAGCCTGCACCGCCCCGCCTGCCTGGCCCTTTCCCACCCATGGGCCTGGTGGCCCCCAAGCCTGCCTCAGGGGACCCTGGGAGGACACAGGACAGCAGTGACGTGCAGGAGCCTGAGAACGGCCAAGCGGATCCCTTGCCTGGGCTGGAGGAGAGACCAGCGAGTGTCGGTGCTTCAGAGGGGGCGTTCCTCAAACAGCTACCTCACCCTGCGCCCCCTCTGCAGGCCGACTTTGCCAGGCGGAGCTCACCCCAAGGAAGGGGCCCAGAGGGCCCAGAGCTCAGGCCGGAGTCCTCGGAACCTGGGGACGGCTGCCCAGCGAGCACGGTCAGGTCTGCCTGGCTCTCAGGGAGTGGCTTCGCCAGCCCACCCGCCCAGGCATGCACCCTGGCAGACCTGGGGCCACTGCCCGAAAACGGACTGCGGGTAGAAGCCTCCCCATGTGGGTCTGAGGGCAAGAGTAGGGCGCCACCCGAGGCTGGGCCTCCTGCAGAGCCCGCGTGCTCACCTCTGTACACGCCCGGCTTGGAGTTCCCCAGCTCCGCCACACGGTACCATGTAGGCCCAGGCCTGCAGTCTGTGGGTCCTGTGATGGGGGGCAAGCCTCCAGCCCCGCACCCTCCTCCCTTTCCCCCTCGGGCATTTCAGTCTCATGACCCTCATTCTGGAGTCTTCCCTCGGTACCGCCCCCACCAGGGCATGCGGTATCCCTATCAGCCGCCACCGCAGCCTTCCTACCACCACTACCCGCGGACTCCTTACTACTCGTGTCCACAGGGCTTCTCAGACTGGCCGAGACACCTCGCAGCCCCCGTAAGCCCGAGCGGGCCCCCCCCAGCTCAGCCCACCCCTGCCAGGCCCCTCTTTCCCGACAAGAGCGCTGTGACGGGGCTGCAGGGCTGCGAGGCTCTGGGCGCTGCCTTAACTTCGCCCACGCGGGTGGACGCCGTTGCTGCCAAGATGGCCGAGGGGCAGAACCCCGGCCCTGAGGGCAAGCAGGATGAGTCTATGGAGCAGCCAGAGAGCCCCAAAGAGTTCCTGGACTTGGATAACCACAACGCGGCTGCCAGGCGGCAGGGCTCCCTGTCGGCCAGCGAGTGTCTCTACGGCGCGCCCCCAGCCCCACTGGGCCCGGGCATGACCTTCGGTTCACCCGCCTTCCCCCCACACGCAGTGATGCTGCACGCCGGGCCACCTTACCCCCCACAGCGGCCAGCCACGCATTTCCAGCCCAGGGCTTACGCCTCCCCCTCGGCTACTCACCCGCCTCACCGCCCAGTGGCGGCCCAGCCCAACGGCCTGTCCCCCGAGTGCCCCCTCTACCGTTACCCTGAGGAGGGCCTGGGCCACTTCCAGGCCGTGATGATGGAGCAGATGGGCCCCGGAAGTGGAGCGAGGGCGTCCTTCCAGGAGATGTACAGACCGTCCGGACTGCAGGGGCCCTCGGTCCAGTCCCGGCCCTCGTTCCCAAAGACGCCGGCACCAGCGGCATCGCAGGAGGAGCTGCCCCCCCAGAAGCCCCCAACGCTTCCACTCGATCAGAGCTAGTCCCAGGAGGAGACAAGCCCCAGGGAAACAGAGAGCTGCAAGTGGAGAACGGGGCCCGGCCCCACCCGCCTCTCCTGTCACCAGCATCACGTCACGTGTGGCCTGAAGCCTGGACGCCCCTCCTCACGACTCATGTGCTCGCAAAGTCCTGGGCGAAAGTGGGGACCAGACAGGCTGGACTCTGGTGGTTTCTCCAGGCCCTGGGACACTTGTTCAGGGAAGACCGTCCTGACCTGGGGGCGGTGCTGGTGGGCTGTCATGGCAGCTGCACTCAGGTAGCCGTCTGGGGACAGGACTACTTGTGTGGGTGTGTTTGGAGCTGGGTCCAGTTTACAGAGTTTTCATGTTGCCTTTGTGATGACTTCTGTCGGTGGTGAATGTATTGTACATACAGTGGGAGGGCGGGTGATGAGGATAGAGTCTGGCCGGTGGGCCCGCAGCCCTGCTGACCCCTGTGTTTACAGCCCTTTCCCACTCACTCTTGGGGGGCTGCAGGAGGGGCACACCTGGCCGCTGCTGTTCCTCTGACGGCTCTTGCCCTCGGGCAGCCGCCTCGCCTGGCACCCCCCCCCCCTTGCCTGGCACCCAGGTCATGGTCTGAGATAGCAGTGCCCCTCCTGGCTGGCCAGCTGCCCGCCAGATAGGTGTAAACCAGTATCAGGAGCATTTGCTCGTTGGAAGGTGCGGTGACGCGTCCCGTCACAGACCTGCCGGGACTGTGGTCTGGAAGGCGTCACAAGCTTCCTGCACGAATCCCAGTTTGTGGCAGTGACTACTCAGGTTTGTATATGCTTAGTGTCAATGAAGAAGCTGCACAGTTTTTAATAGGAAAAATGTATCCTATAGATTTACAGCTGGAATTTAGGAATATTTCAGTATATATAGTTTTTATCCATTTTATGTGAATATAGTAAAGTATGTCGTGGTGATTTAAAATAGCTGTCGAGAACAAGTTCTTGAAGTCACTTGTCTGTGATAGGAAACAGTTTTACAGTATTCAGTTACTTTATTATGGTTTTAGAAGCAAGCGACACTGGATTCTCCCTGTTTAGTATTCTTTGAGTTTAGCTGAGATGCCACCAAAGTTAGGACTCCTGTTTTAAGCTTTTGAATATCCCACAAAAGCAAAGGAGGAAGCAGCTGAAGGGGGAGATACCTTGAAGTCACAGGTCTTTGTAAAAATAGCGTATTTCTAAGCATGCCTTTGAGATAGTAGAAAAGCTTGCAGGAAACATTGGTTGATTGATCTGCGCTTGTTCTTATAAATTCAGCTGTGTGAGGGGCCAAGAGAACCTTCCATCCAGCCCCAGCGTCCTTGCTGAAGCTGGAGCAAACCCGCGCTTCCAGTAGTAGAGTCCCCGCGGAGACCAACGCCAGCTCCAGACGCCCAGATGCTGCGCTCAGGCAGGGGGAGCGCTGGGAACGCAGGTGCCTTCCAGACATGCGCAGAAACATGATTTTTTTTTTTTAAACAGACTTATTTAAACTTTAAATTTGGCATGCTTTCAAGTGGGGCAAGTTTGGGGGCTGTGTTCTCATTGGATTCTGGTTCTTGTTGGAGCCCTGTCACGGGCGTGATGTCGCTCAAGGTGGGGACATCAGCATCGGCATTTGGGAAGGATGGGGAAGGGTCGTGGACAGATCCAGCTTTGCTCTCTAGCAGTGAGGGAACATGCTTGGCACACTCAGCCTCCGTGTGTGTCTGTACACCAGCTTGGAGGGGAGACCGTGGCCCCTGCCTCTGTTCCCAGCCCAGAGCCTGCTTGGGTGCAAGGCCTCGGGCACCCTTGCCTTGAGGGGAACCAGGCCGGGGTAGGGCCAGGAGGACTATGGCAATCCTGCCCATTCTGTCTGCCCACCGTGCACAGCCCTCTGGTGGCTCAGCCCCCCAGCCCCAACCCCATCTCCTGCTGCCCCAGAGCCTCCCTTCGGGGTGAGCAGAGAGGCCAGGCACTGGGAGCCCTGTTGGGAGTGCGGCTGTGTGCTGCGTTGCCCCACAGGGCCACCCCCGTTCAGGGCCCGTGCACTCTTCCTGACCAGAACTAGCCTGGGAGGAGGTCCTGGGGCGGCATCCCCCTGGGACCGCTGCCACCTGTCAGGGACCTGGAGGACTCCTGTCCACCACTCACCTTAGAGTCGTTATGTTAGAAACCGACTTCCCCAGACCCAGGAGAGAGAAAAGATCCAGAGAGCAAACAAGAGCCTTATGGAATGTTTCTGGCCTTGAGTTTTTCCCCTCCTGTAAGAAGAGCTGTTGGCTAAAACTTACTAGGCTGAAGACAGGTGGAGGCCGAGTGGCAACAGACGCGTGGACTCCTGTTCAGAACCTTTTCTTGTCCCGCCTTCAAAGTGAGACTAGTGCTGCCGTGTCCATCTGCCTCCCTGGGGCCCTCGCGCCTGTCGTCAGCAGGGCGTCCTCCCTGGGCGGGGCCGGGTGACTCTCAGAAGGCTGCCTTTCGTGTGGACTGAGTACCTTCAGCCCCCGGCCAGCTTGGCCCCTAGACCCCGGGAGCGTCCTTGTGACTTGTGCTGGTTCCTGCCAGTTCCAGGAGTGGGCCGCGTAGGCTCAGGGTTTTCTCGCTTTTTGAAAGTTTCCATCTCAGCCACACACATGGCTCTCAGGTCCTGGTTTGGATTCTC EMBV3_30739 AAATGTAACAGATCGACTTGCCTGAGAATGTGAAGCGAACAAGCGTGAGCTCTCCTGGGC Gene GeneID:506939|CTTN:NM_001075287:245_cdna Constitutive 0 NULL GeneID:506939 29 GENE CTTN MGC137923 cortactin EMBV3_35815 GGAGTGAATCCTCTGGTCTACACTCTCTTCAACAAGACATTTCGGGATGCATTTGGCCGG Gene GeneID:407135|HTR2B:XM_002685678:469_cdna Constitutive 0 NULL GeneID:407135 2 GENE HTR2B 5-HT2B 5HT2B 5htr2b 5-hydroxytryptamine (serotonin) receptor 2B EMBV3_26549 TCCCTGAGGAGCAGTGGCTCACAGGACCAGGGAGACCAATGTAAATTTGATCATGATGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24893 AAGGGGCTCCGGCAGAAGAGGCTGAGTTCTATGATCCGTTGAAAGAGAAGTGGATTCCTA Gene GeneID:100140861|KLHL23:XM_002685284:76_cdna UTR3_Alt 2 NULL GeneID:100140861 2 GENE KLHL23 NULL kelch-like 23 (Drosophila) EMBV3_35992 CTTCACTGACAGCTACAGCCGCTACCGGAAACAAATGGCTGTTAAGAAATACTTGGCTGC Gene GeneID:615187|ADCYAP1:NM_001046555:185_cdna Constitutive 0 NULL GeneID:615187 24 GENE ADCYAP1 MGC140674 PACAP adenylate cyclase activating polypeptide 1 (pituitary) EMBV3_24646 CAAGCGTGCAATGGACCTGGTTCGAGAGGAGTTCCAGGTGGACCCAAGCGGGGAGATAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12065 GGTGGCCGTTCACCAGTGATGGTTTTCTGCCTTTAGATCTGCCTGCTTCTTTGAGAGCTT Gene BVT0102_124731 - 1 EMBV3_19087 GK000001.2:130792041-131089307 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29390 TAGGGACTTTTGGGTGCCAGTGAAGTTGCTGAAAGCTGTGCGAGATGACTCAAAGGACTC Gene GeneID:509524|C11H2orf39:NM_001037591:99_cdna Constitutive 1 NULL GeneID:509524 11 GENE C11H2orf39 C2orf39 FLJ32660 MGC133970 chromosome 2 open reading frame 39 ortholog EMBV3_27838 GATACCAGGGAGGTGGGAGGAAGAAGTGGGAAAAAATCCCCTTTCCAGTACCCTTAAAAG Gene GeneID:539145|OTUD5:XM_002700078:159_cdna Constitutive 2 NULL GeneID:539145 X GENE OTUD5 NULL OTU domain containing 5 EMBV3_24968 GATGCCAGTATGGACCGAGATGATAACCAGACTGGCCAGAACGGATATCTAAATGACATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14971 TTTTTGAGCACCTGCCTCATGTAGGTCTAGATGTTTCTAAGTTCAAGCACATATCCTGAA Variant GeneID:497029|GRB14:NM_001011681:67_cdna 658^854 1 EMBV3_25736 GeneID:497029 2 GENE GRB14 NULL growth factor receptor-bound protein 14 EMBV3_09546 ACCTCATGCCTGCTCTCTGGAACCGACCCACAACACTGCTCTGTACTTTTCTACACTGCA Gene BVV0102_048825 + 0 NULL GK000005.2:67784874-67791378 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195410 TCONS_00195412 TCONS_00195411 1 XLOC_118039 Coding TCONS_00195410 XLOC_118039 Coding Coding NT5DC3 5:67786596-67820298 j TSS145621 5956 1 TCONS_00195410_2 360 0.146406984553392 11 0.823595738998843 4.27185038974561e-10 1.51588945717971e-05 2.51918108780471e-10 9.41319535350052e-06 1.21310895654623e-13 1.90540820445122e-11 8.03130408234331e-10 1.4921728879283e-12 2.64218734072213e-09 1.79510258246216e-05 2.30064562317965e-06 5.91221484390562e-07 9.56434084689816e-07 3.86882627792687e-05 5.58449138650198e-13 0.00490735264521425 0.00138627809424584 0.00378714886265715 9.61440488769661e-06 0.000233014584184582 1.44554554957647e-05 0.00167874728836434 0.00113801471542805 0.00219581137249825 1.78644653010582e-05 2.42365097733626e-12 3.90124166579963e-06 0.000243492713183235 6.43438788023745e-05 0.000341598193416671 XM_599179.4 NT5DC3 PREDICTED: Bos taurus 5'-nucleotidase domain containing 3 (NT5DC3), 0.0 2906 100.00 0.270315648085964 NM_001031701.2 NT5DC3 Homo sapiens 5'-nucleotidase domain containing 3 (NT5DC3), mRNA. 0.0 1512 79.15 0.302048354600403 TCONS_00195410_2 sp|Q86UY8|NT5D3_HUMAN NT5D3_HUMAN 5'-nucleotidase domain-containing protein 3; 0.0 721 95.57 0.997222222222222 1 coding 0 0 0 0 0.0300710013086719 0.84473586310047 0.0106920855333114 0.814294440224302 ATCTTCCTGACTCAGGAATCGAGCCTGTGTCTCTTACAGCTCCTGCATTGGCAGAGGCCTCAGTGTGGTCCCCGATGAGGAGGTCATTGAGATGTACGAGGGTTCCCATGTGCCTTTGGAACAGATGAGCGACTTCTATGGGAAGAGTTCTGGAAACACCATGAAGCAGTTCATGGACATCTTCTCCCTGCCCGAGATGACTCTGCTGTCCTGTGTGAACGAGTACTTTCTGAAGAACAACATCGACTATGAACCTGTGCACCTGTACAAAGATGTCAAGGATTCAATTCGGGACGTGCACACCAAAGGAATCATGTACAGAGCAATTGAAGCAGATATTGAAAAGTACATCTGCTATGCTGAGCAGACCCGTGCGGTGTTGGCCAAGCTGGCTGATCATGGCAAGAAGATGTTTCTTATCACCAACAGCCCCAGTAGCTTTGTGGACAAAGGGATGAGGTATATTGTTGGAAAAGACTGGAGGGACCTGTTTGATGTGGTCATCGTTCAGGCTGAGAAGCCCAACTTCTTTAACGATAAGCGGCGACCTTTCCGAAAGGTGAATGAGAAAGGTGTCTTACTCTGGGATAAGATCTACAAGCTGCAGAAAGGCCAGATTTACAAGCAGGGCAATTTATATGAATTTTTGAAGCTTACTGGATGGAGGGGCTCCAAAGTGTTGTATTTTGGTGACCACATATATAGTGACCTGGCGGACTTGACCCTGAAGCATGGCTGGCGAACGGGTGCGATTATCCCTGAATTAAGATCCGAGCTCAAAACCATGAACACGGAGCAGTACATTCAAACTGTGGCCTGGCTACAGACCCTGACCGGGTTATTGGAGCAGATGCAGGTTCACAGAGATGCGGAATCACAGCTGGTTTTGCAGGAGTGGAAGAAGGAGAGGAAGGATATGAGGGAAATGACCAAAGGTTTCTTCAATGCCCAGTTTGGGAGCTTGTTCCGCACAGACCAGAACCCCACGTACTTCCTGCGGCGCCTGTCACGGTTTGCCGACATCTACATGGCGTCCCTGAGCTGCCTGCTGAACTACGACGTCAGCCACACCTTCTACCCCCGGCGTACCCCACTGCAGCACGAGCTGCCCGCCTGGTCTGATCGGCCCCCGGCCGCCCGGCTGCCACTGCTGCAAGAGGCCCAGGCCAAGTAGCTGGCGGCCCCCAAACCCCTGGGCACCAAAAGCCAGGACCGGTGATGGCCCCACGCTGGGCAGACTCTGCGGGGATGTGAGCGTCCCTTTTGGAAATGATACAGATAGTCTTAGTGATACCTGTTTTGTACATTATGGAGGATACCCCGAAGCTCGTGGAGAAGGGAGCTCACAGCTCGCAGAGCCCGCCCTCCTATGCACGTGGGGAGGGGACAGCGGCTGGCCTCCTGTCGACACCCTGTGATCAGCCTTCTTGTTTCCCAAGGTACTGTATCCAGCATCGGACTTCCTGGGATGGGGAGTCTTCTTGATGTCTGCTCTGTATTCCAGCAGGTGATGTTTTGAAACTCTTCTTAACTCTTCTGTGGAAAGTGCATGGAAAATGCTGAACACGCACAGACAGTGCCGGACCCAGTGACGTGCATCCCTGGTGAACTGCTGATGCTTTAGTGGGCGCTTGGATGGGGTACCGTGGTGTCAGCAACTGAGATGGAGCCCAGTCGGCAGCTGGTTCCCACACACCTGGTACTAGGGCTCTGGCACACTGGTGCCTCCCTTAACAGCAGACTCAGCCTCCCTGGAGGTCTTATGTGAGAAGGAACAGGAGAAGTTGCAAGTCCTTGGCCTTGATTGTCCTCAGTATCCATTTCCTTTGTCTTGCCCCACACGGGGGAAGGACCATGGTGTCCCAAGTGGTGGGCAGGTTCACTCTTTTCTCTCAGAAAAGGAGGACAAGGAGAGAAAAGCTTCTGGTTTAATGTCCTGCCAGCAGAACAGACTGTAGAATGAGGCTGCTACATGCCAACGAGCGAGAGGAACCAGTGCGTTTGTGGTGGGTATCCCAGGACTTTATAACCCCTGACACTACCACCACACGTGTGTTGCTTGAACCTGCTCATTGGAGGATGAAAAATGAAACGAAGAAAAATGTCCTCGTAACTTAGTGCCGTGTGGCGACCCCCCAGCCCCCAGGTGTTTTGCAATCTTGTTAAACTGTGTGTTACCAGAAACCCTCCTCGTTGGAGGGCAGTGATTCATCAGCCGAGGAGACGGGCTTGAATCCAGCCAGAGCGAGGGAGGTGGCCCTCTCTGCTTAGCTGTCTCCCACCTTCTCCCTGTAGATCGCTTTCCTGCCATGTTTATGTCTGTTTTGGGAATTTCTGTAGTGTCTGTGTTTAAGGTGGGAGCAGATCAAGGACATTGACGTTGAGAGAAACAGAGTTGGAAATAGCCTCACTGAGTGAGTGTTCCCATTTCTGAGGACAAGGCAAGTGGCACCTGTCCTTAAACCTGGAGGATGCAGGGGCAGAGGAAAGGGGCTTGAGGAGAGACTCCTCGCTTATTCAGCGTTTTTAATGAATTTGTGTGGAGCCAGCTGTTGAGGAAATGTGAGCTTGGCCTGCCACAGGCTACCTGCCTGAGTGCAGAAATTAGGTGACTTCTATGCTATGCTATGCTAAGTCACGCTATAGAAGTTTTTTAATGTTTAACGCTATAGTTTTTTAACGCTATAGAAGTGTTTTAATGGGACTGTTGTTGTTTAGTCAACTCTTGGCAACCCCATGAACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTTCCCAACCAGGAATACTGGAGTGGGTTGTGATTTCCTTCTCCAGGGGATCTTCCTGACCCAGGGGTCGAATGCACATCTCCTGCATTGGCAGGTGGATTCTTTACTGACTGAGCCACCAGGCATACCTGTGATCTTTTCTTATATTTAACTAAAATAGTGAAGGTGACTCTCTAGACCTAATAGGCCCAGTTGGCCTTCTTTTTTCCCTTTATTATAAATACAGGTGTCCATTCCCTTTTCAGGCTGCAGGAGGCATTTTGTTGGCTGTTTGTTAGTGCCTGGGGGTTTTAAGCATCAGAGTGCATTGGAGACTGGCATTTCAGGGGTGCAGGAGGCGCCCAGAACTGCTCAGTGTTGGGGTCCTCAGAGGATATGCTGGTGCTTTGGGCTGATAGTTTCTGCTTTGGAGAAGCTGGTTGAGGAAGTAGGTATTTTAAAACTCTTTCTAATCAGGTATTCACTGGATATATCCTACGTGCCAGTGATAGGGTGTTTTGTTTACTCAAGAAAGTTGTTACCCAACAACAACTCAGTACAGCTATTCTTACTGCTTTCATGTATGTCTGGGTTAGGAGACCCAAGCCTGGGGCGAGAAATACATTTTCTAGGTGTGTGAATAAGGAATTTTAATGACTTATCACCAATTAAGGTTGAGCAAGCTCCAGGATATAGTGAAGAATAGGGAAGCCTGGCATGCTGCAGTCCATGGGGTCGCAGAGTCAGACATGACTGAGCGACTGAACAACAACTGAAGGCCATGGCACATGACGGTATTGAAGTCTGTCTGCGGAGGACCCACTGAGCATGCGCTGGGGCCAGCGCACAGTCAGGGTCAGGACGGCCATCTCTGTATGAAGGACTGAGGGCTTCTCTTTGTCTGTGCTTGTTCATTTTAATTTGTCACTGTCATGACTCAGCCGGGATTCAGCACCCTGTACAGCATTCTGTTCCTCCTGGTTTAGCCTCTGGTGAGCCCGCTGATGAATGCATTTGGGTGCAAGGGAAGGGAGTCTATTTTCTACCACTTAAAAGATCAGTTTGGAAAGTGAGCAGAATAAAATTAGCTTGCACATTGAAAAATATTTTCCCTTTTTAGCATCAGTTAGACTGATTTTCCCGGAAGGATGTGAACAAAAATTCATAGTCCAGGGGCGGCTATCTGTGCCCCTAAGGCTCACCATAGCTGTAGCCGGTTGTCCTGGAAGGGACCTGCACAACTGTTTTTTCCAGAATCGTTTTTTTAAGTAGATGAAACCTGGCTTTTAATATATTTTAGGAGTTTGGAGAGCTCCCACTTTCCTCCTAACATAGCCTTTAAAATTTTTTTTTCTTTTAAAAATTCCCTTCAGCTCCACTACTGCCAGCTAACATAAACCACCTGTTACTGATTCAGGCCCATCTATGACTGAATTCCTAGTTGCTTTGAAGGCATTGGTTCTCTTAATTAGTGCCAAGGAGAAATGCAAAGTCCTCTTTCCTGCTAGCTAATTTAGCTTTGGGTGAACTAAATAGCTTCCCCCGCCCCTTTTCCTCCCCAAAGGCCTCTAAAGCCGTAGAGTGTGCTAAACGTTGGAATTGGATCTGCTCTGCCAAATGCTCATCTGTTGCCAAAGACCCACTTGGGGGCCCTGGTCTGGAATATGCTCTCAGACTCAGTCTGGGTAGAGGCAGGGAGGGTTCCTTGATTGCTCCATTCAACTACCACGGAGCCTGTGTTGTGCTGGCTTAGTACTGATTTCCTTTTGTACTAATTTCCTTTCTTTTCTCCGTTAGCATATGGGAGCTAGGCTCCAAGCCTGGCTTAAGTGAAAAGTAAAGTTGCTCAGTCGTGTCTGACTCTTTGTGATCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGAATTTTCCAGACAGGAGTACTAGAGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCCACCAGGCTCCTCTCTCCATGGAATTTTCCAGGCAAGAGTACTAGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCTGGGTCCTCCCGCATTGTAGGCAGATGCTTTACCATCTGAGCCACCAGGGAAGCCCCCAAGTTTAGCTTAGCTTACCTTTAATACCCTAGTGGATGGAGGAAGAAAAAGGGAGTGAAGTTTCCCTGATGTAAGGCTCAGCACACTTTCCCTGGCAAGGACCGGACAGGAAAGACTTCTGGCTTTGCAGGCCGTTTGCTGCAGCCCCTCCTCTGGGACTGGGCCTGCCTGTGGTCCAGGGCAGCCTGGCCTCTGAAGACAGGCTGCAGGCTGGATTTGGCCCTCGGGCGGTGGTTTGCTGACCCCCACATCAACAGATTGTGTGGGTGGCCATGATGAGATGATTTTGCTGAAAGTGTGCAGGGTGGTAAGCAACCACAGAACACAGTTGTGTGCAGCCAGTGGAAAGAAGTTCTGTAGGTAAGCTCGCACTTCCCCTAGGAGCTTCTCTCGGGACATATTCACTTATGTGGCCAGTGGTAACATACTGTGTTTCCGGCACATGGCATGATTCTCAGTTGTGTGACTGAGCGGCCAGGCTTGGCACTCATTGAATATACCTCTCGTTGTGCTCATCTGTGATTGTGTTAGTAGCGTTGTGATGGGCTTGGCTACCCTGAAGGACTTTATCCCCCAGCTGCTGTGGGGGTTGGTTGCTGCTGGCTCACTGTCTGCAGCTGTAGGTCCTCTCTGGGAGCTTCCCCCTATTGAAGAGTCCTGCCTAGGATGAAGGGTGTGTTCAGACTCCCTCCCTGGAGCAACTCTGAGGCCCATCAGCTCCTTCCTGCCCCACCCCTCCTTCCTTTTTCCCAGGTGTGCATCCCAAGGACAGTTCCCTGTAAACTTCCCGTGTGAGACTCCCCACCTCATGCCTGCTCTCTGGAACCGACCCACAACACTGCTCTGTACTTTTCTACACTGCAGCCTTGAACTCTGACTTAGGACACTGTTTTCTAATTATTTAGTAGAAGGACAGATGGTGCCTGTTTAATTTCAGGCATGGTAAATGCAAATTAGGTAGACTTGCTATTTATCCTGAATGTGAATTTGCTATTTATTCTAAATACTGATTTTATGTTAACATGATGTCGAACTTACTGCCAAATAAAAGTTTGAATTGTATTGTCCAGTTTACTCCCA EMBV3_41094 GTCAGATGGAGTGATCTCACCTGGTCCTTCCTGGTTTGACGGGAACAAATTTCTGGTTTG Gene BVV0101_022123 + 0 NULL GK000007.2:54640000-54670602 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221339 1 XLOC_134655 NonCoding TCONS_00221339 XLOC_134655 NonCoding NonCoding - 7:54670102-54670440 - TSS165337 338 1 TCONS_00221339_1 38 1 0 0 0 0 0 0 0 1.72536175686437e-05 0 0 0 0 3.17368593371947e-05 0 1.39171196981665e-05 0 0.00218794454811438 0 0.00126196949352747 0 0 0 0.000109773320819105 5.42843843820694e-05 9.91989045954306e-05 0 0 0 0 5.74512024170965e-05 0 0 noncoding 0 0 0 0 -0.783306975905234 0.0812170141626191 0.0107690283829939 0.859489707973306 GAGATCCTTTATTTCATGGATTCAACTGTGGGGAAAGAGGATTGATTCTTTGCCCAACGAAAGAATACACAGATAACACTGGCTTAGACTGAAGATAAGAGCTCTGATTAACAGGCGGCCAGGAGGGGGCCAGTCTCCTCTTTGAAAGCAGCAATTCAAACCAGAAATTTGTTCCCGTCAAACCAGGAAGGACCAGGTGAGATCACTCCATCTGACCCTATCATGGGGCAGACTGAGGCACTGACAAAGGAAGGGCTCGGCCGGAGGGTATACAGTGAGACAAAGCCGAGCCAGAGTCGAATCGGAACCCCACGTGCAGTTTTTCATCTCCTATCAAG TCONS_00213637 . 5' 163 TCONS_00213637 . 5' 163 EMBV3_21352 GTGATCCAGTGGCTAAGACTTCATGCTTCCAATGAGGAGGGCCTGGGTTTGATCTCTGGT Gene BVV0102_125481 + 0 NULL GK000017.2:64577902-64634420 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37951 GTTCAGCATTGGAGACTCCCTCCATCACATCTTACATTAAGGTCAGGTAGACTCTCCAGG Gene GeneID:281625|ANXA4:NM_001001440:5_cdna UTR3_Alt 2 NULL GeneID:281625 11 GENE ANXA4 NULL annexin A4 EMBV3_00497 CTGGGTCTCACCTCGTCAGTGTGCATAGTGGCAGAAATTATCAAGAAGGTTGAAAGGAGC Gene GeneID:327663|ATP2C1:NM_175785:24_cdna Constitutive 0 NULL GeneID:327663 1 GENE ATP2C1 SPCA ATPase, Ca++ transporting, type 2C, member 1 EMBV3_16837 GGGCTTCCTCTGAGTGGGTTTTCCGCTTAGAATTAAGATGCATTGCTTTGGGGTGGTTGC Gene GeneID:511800|ANKH:NM_001109793:14_cdna UTR3_Alt 2 NULL GeneID:511800 20 GENE ANKH MGC166183 ankylosis, progressive homolog (mouse) EMBV3_03683 TACTCATTTACTTTGCTACCATTTGTAGTGAGGTCAGGGCTGAAAGGAGGAAGTTGGAGC Gene BVV0102_192017 + 0 NULL GK000028.2:24571566-24587773 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01757 TGTGGTACACCCGGGACCGCCTGGTGCCAGCGCGTGTTCCCGTACATCTCCGTGATGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05011 ATTCCAAGGATCTCACCGTGTTGCTGAAAACCTGCGACACCAGCTTCCTGGACTTCCTCA Gene GeneID:531276|LOC531276:XM_002687899:116_cdna Constitutive 0 NULL GeneID:531276 5 GENE LOC531276 NULL similar to dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 EMBV3_10767 CAGAACATGAGGTTGGGCTATCTAGAAAACTTCAGACAAGATTTAGGTATCCCAGCCAGC Gene BVV0102_458199 + 0 NULL GK000011.2:72555600-72565908 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26471 GGTCTATGAGACGAAGTTAGGTCTTTAGGGTCATTTTGCCTGAGGAAGGATGGCTGTGAG Gene BVV0102_324868 + 1 EMBV3_10380 GK000027.2:26717662-27623937 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09079 CAAGGAGTCGGGCATGACTGAACGACTTTCACTTACATGTGGTCAAGCTACGCTATTCAG Gene BVV0102_298117 + 0 NULL GK000022.2:22119731-22229484 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36777 ATGTTAGAAGAAATATCCAAAAAGATACAGCTGTTATGGAGGACTTGGGAGATCTTGTCT Variant GeneID:615282|CDKN3:NM_001040582:134_cdna 238^325 2 EMBV3_38731 GeneID:615282 10 GENE CDKN3 MGC133531 cyclin-dependent kinase inhibitor 3 EMBV3_29153 CCAATGAAGAAGAACACCGTAGGAGGATGGAAGAGGCCAGATTGCAGCTCAAGGATCAAC Gene GeneID:529746|LOC529746:XM_002691076:172_cdna Constitutive 0 NULL GeneID:529746 10 GENE LOC529746 NULL similar to Uncharacterized protein C14orf145 EMBV3_04977 ACTACCACTGTAATGAAGTTGACACCGGAGCTGACGTTTTGCCCAGTGAATGCTCGGTTC Gene GeneID:530116|DAZL:NM_001081725:17_cdna UTR3_Alt 2 NULL GeneID:530116 1 GENE DAZL NULL deleted in azoospermia-like EMBV3_43368 TCAAGATCTCTCAGAGTCATTTTCTTCTAACTTGACTGTGAAACATCTAGGTTTGCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32156 TGGAGACATTGGCTGGTGTCAGATATCAAGCCTACCATCCTCCCTCCCCACCAGCACACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04425 CTGCCTTGCATTGGTATGAATTAGCCATAGGTGTACCTATTGTCCCCTCCCTCTTGAACC Gene BVV0102_246045 + 0 NULL GK000021.2:31404472-31408630 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25161 AGATCGAATAACTTCTACCTGGGAATGCTCTTGCTCATCCTCTTCCTGTCCACCATGCCC Gene GeneID:538406|TMC1:XM_002689649:6_cdna Constitutive 0 NULL GeneID:538406 8 GENE TMC1 NULL transmembrane channel-like 1 EMBV3_22274 GCTGTGCCCACTGTGTCTGTGGACCGTGTGTCTTCTGGGAGGTGCATTTCAGGGAAAACT Gene BVT0102_113691 + 0 NULL GK000029.2:50830783-50835592 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168141 1 XLOC_102976 NonCoding TCONS_00168141 XLOC_102976 NonCoding NonCoding - 29:50833921-50834495 - TSS126119 574 1 TCONS_00168141_1 76 1 0 0 0 0 0 0 0 0 0 0 7.16810860860669e-06 0 0 0 0 0 0 0 4.37123524024549e-05 0 0 0.000111063540955664 0 4.79479710533711e-05 0.0011974750254691 0 0 0 0 0.000465162832616173 1.04742941051189e-05 0 noncoding 0 0 0 0 -0.0888711427581069 0.57012272594888 0.0352163308676315 0.470863338850909 CTTGTCCCCAAGGGTCGGGGACAACAGTCAGCTGTGGCCAGTTTGCACCTGGGGGGTGGGGAGAGAGGGTCAGGTTGAAGTGCAGAGGTCAGGCTCTTCTCTGAGACTGGGGCACTGAGGCTCTGGGTGAGTTTGTAGGGAGGAATCTGGGGGGTCAGAGGGTTTTGGGAGTGTGGGTGGCAGCCAGTGGTCTCTGCGACCCAGCCACCCCCTGGCCTTTGCAGCAGACAAGCGTGTCTTCTCCGCTCCTGCATGAGTTTTCCCTGAAATGCACCTCCCAGAAGACACACGGTCCACAGACACAGTGGGCACAGCCCATCTCCACCCCACAGCTCCGGATTCCCTGTGCCCGGGCACAGAGAGAGCCCCGTTCCTGGGGTCCCAGGGCCCTAACCAGAGCCCGCCTGCTGGCTGCAGAGGAAAACTCGGGGAGCAGCTGGGTGCACGGTGGCCGCGGGCTGGGGCCCCTCGAACCGGCTGCGTGGCTTGGCTGGGTTAGCCCGTCAGACCCGCTGCCTCACGGGCCGAAGGGGGCTCGGAGGCCAGCCCAAGCCTCCCAGAAGCTGTCACACCC TCONS_00164270 . 5' 119 TCONS_00164270 . 5' 119 EMBV3_35001 ACACCACCACAGGGAGGGTCATGGTTTTCCGTTCCCTTCCACACACAAGCACACCAAATT Gene GeneID:282866|SPON1:NM_174743:48_cdna Constitutive 0 NULL GeneID:282866 15 GENE SPON1 MGC142579 spondin 1, extracellular matrix protein EMBV3_36997 TGAAGTATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAAATGTAAACCTGACAAT Gene GeneID:768079|IER3IP1:NM_001113320:206_cdna Constitutive 1 NULL GeneID:768079 24 GENE IER3IP1 MGC139103 immediate early response 3 interacting protein 1 EMBV3_02996 GAAAAGAGAAAGAAATGCAAGGCATTTCAGTGTGTTGACTGTATTACACCATCTGTCTTA Gene BVV0102_075048 - 1 EMBV3_10295 GK000005.2:57059974-57063070 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191985 TCONS_00191982 TCONS_00191987 TCONS_00191986 TCONS_00191981 TCONS_00191988 1 XLOC_117072 Coding TCONS_00191981 XLOC_117072 Coding Coding PRIM1 5:57042166-57061075 = TSS143768 2746 1 TCONS_00191981_1 418 13 0.855458007192723 0.00022316240068387 0.000841072809903719 0.000630861077796299 8.23803164576557e-05 0.00034416222133741 7.32739091508978e-05 0.000231138433283835 0.000160832417571495 0.000553795960080329 1.10269593312439e-09 5.51236546442342e-52 2.10418459631178e-06 1.465178549263e-05 6.97472843769063e-07 4.6654829046605e-08 0.00300789357633728 0.000403571342915023 0.00330266993636967 0.000403631247465529 0.000471541288408631 0.00017489701793866 0.000722442835541238 0.000920337142672892 0.00101922440982731 0.000488203578116712 0.000407188525089348 0.000508332954169409 0.000109086251712404 2.40566926210448e-05 0.000173831741540467 NM_001145865.1 PRIM1 Bos taurus primase, DNA, polypeptide 1 (49kDa) (PRIM1), mRNA. 0.0 2937 100.00 0.592498179169701 NM_000946.2 PRIM1 Homo sapiens primase, DNA, polypeptide 1 (49kDa) (PRIM1), mRNA. 0.0 1896 89.15 0.527676620538966 TCONS_00191981_1 sp|P20664|PRI1_MOUSE PRI1_MOUSE DNA primase small subunit; 0.0 777 87.80 0.997607655502392 1 coding 0 0 0 0 -1.50899701406805 0.00354178250638726 -0.0345341355036925 0.825302228514818 CTGCGGACGGCGGGCCGTGGCCACGATGCGCCTGCGCAGTGGCTCAGGCTGGCCTGTGTGGTTCCCGCCAATTCTTGCGGTAGTCCTCCCACGGTTGAATTCTGTGTTCCATGGAGGCGTTTGATCCTGCCGAGCTGCCCGAGCTGCTTAAGCTTTATTACCGAAGGCTCTTTCCCTACGGCCAATACTATCGCTGGCTCAACTATGGCGGAGTGGTAAAGAATTACTTTCAGCACCGTGAATTTTCATTCACATTGAAAGATGATATTTATATTCGCTACCAATCCTTCAACAACCAAAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCATACAAGATTGATATTGGCGCAGTATATTCCCACAGACCCAATCAACACAATACAGTGAAGCTGGGAGCTTTCCAGGCTCAGGAAAAAGAACTGGTGTTTGACATTGACATGACAGACTATGACGATGTGAGGAGATGTTGCAGTTCTGCAGACATATGTTCCAAGTGCTGGACCCTCATGACGATGGCCATACATATCATCGACCGAGCACTAAAAGAGGACTTTGGATTTAAACATCGTCTCTGGGTATATTCTGGAAGGAGAGGTGTTCATTGTTGGGTCTGTGATGAATCAGTTAGAAAACTGTCCTCTGCAGTACGTTCTGGGATAGTTGAATATTTGAGTCTTGTAAAGGGTGGTCAAGATGTTAAAAAGAAAGTTCACCTAAGTGAAAAAATTCACCCTTTTGTCAGAAAATCTATAAACATAATAAAAAAATACTTTGAACAATATGCCTTAGTTGATCAAGATATTCTTGAGAATAAACAAAGTTGGGATAAAATTTTAGCCCTTGTTCCTGAAACAGTGCGTGATGAACTTCAACAAGGCTTCCAAAGGCAGAGCAATTCACCTCAGCGTTGGGAGACTTTGAAGAACACCATCAACAAATATCAGAAAAACAACAAAAACGACAAATGTGGACTCTGGCTTGAGTGGGAGATCATGCTCCAGTATTGTTTTCCACGACTGGATATCAATGTTAGCAAAGGAATCAATCATTTACTGAAGAGCCCTTTTAGTGTTCATCCTAAAACAGGTCGCATTTCTGTGCCTATTGACTTACAGAAAGTGGATCAATTTGATCCATTTACTGTTCCAACCATAAGTTCCATTTGCCATGAGTTGGATGTTATTTCTACTAAAGAAGAAAAAGAGAATGGAACTGAATCTGATACTAAACACAGAACCAGAGATTATAAGAGGACCAGTCTAGCTCCTTTTGTAAAAGTTTTTGAGCAGTTTCTTGAAAACCTGGATAAATCCCGAAAAGGAGAACTTCTCAAGAAGAGTGATTTACAAAAAGACTTCTGAAGATAACAGCTCCTTTTATATGAATATGGATTATCGTCTACCTTCAACCAAGAATCAAATACTTCAAGAGCCATTTAATAAACGTAGCAGAACTGTGTATGTGTCTTAATGCTCAAAGCAAAATTTCCTTTTCTTGAGAAAGAATTATGTTGAAAAGATTCGGGAAACCACCAAAGGAAAATGTTCAGATTCCTGGAAGGAGCAATAATGGGAGGATATAAGTGAATGCAGATTAATCTGTAAAATTTAATATTATAATTCTAAGATTACTGATACAGGTACTAACTTTTAGTAGTTGCCATGTATAGAAGTAAGTGAGTAGTAATATGACCAAGACTTTAATGTCAGTTCACCAGATTCAACCTCCATATTTCTAGGTGTATGAGGGTTTTGTTCTTAAGTTCTTAATTAACACTTAAGTTAATTATACCTGGAGTGTATATTCAGTAACTTCCTCATTTTGTTTACTGATACTTTTATTGGTCAGGCCACACCCCACTCCTTGTCTTTTAAAAAATCATTTTAAAATGGGCATCTAAACCTACTATAACTTTAATTCAAAAGATATGACTTAATACTGTTGCAATATTAGAGCCTAGTATTTTTTACAACTGTTGGCAATTGTAGCTCCTTCTTCCCTCAGAGAATAATTTTCTAAGCAATTTAGAAAAAATAAACCACTTCACCAGCATAAAACTTTTTGTACTTGTCAAAACACTTGGACTTTGTAGATCTCCACTTTAAATTTAAGTGTTTTTTTTAAATTTAAATTTTAAAGGTTTCATTTCTTCCATATTTGACTTCATGTGATAGATTCTGAAATGTCAGATTTCTTTTGCCTGATTTTACAGCCAGTCTAAACAAAACAGTCGTTCTGGTTTACATTGTCTTTTGAGAAACATTGAGAAGCTGGCTTTCAGGCTGGTGCTTTCCATGGGGTATGAAAATTTTCCTTTCTTTGCATTACCTATAACATTGTTTTCACCATAGCCACAGTCTTTTTTCTTTTGTCTTTTGACTTATATAAAACAGATGGTGTAATACAGTCAACACACTGAAATGCCTTGCATTTCTTTCTCTTTTCTAATTTTTTAAGAAAAAAATTAAAGACTATTGTGTAAAATTCCTCTGTTGAACTTCTGTTTGCTATATATTGTTCAATCTTTTTGGAAAACAGTGACTGGTCAATTAAAACTCCTGAATACAAAATTACTAAAGATTTGTTAGTCCATCTTAAGTAAATGAGAGGAGAAAAACTGGGATTACCCATTCAATAAAAGATGTTTTAGCATTAAAGCATTTTAATGCTTTAATATTAGAGCCCTTGATAAAAACTGGTATAACAGCCCATAAAATAAATATATTGTGCTTGTATATAA EMBV3_05371 GCAGTGATAGAGGAACCCAGTCTCCTTCCATTGTGTGACTGCCATCTTCCAGAGATCATC Gene BVV0102_054722 + 0 NULL GK000007.2:64048683-64055330 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217441 TCONS_00217439 TCONS_00217437 TCONS_00217438 TCONS_00217440 1 XLOC_131509 Coding TCONS_00217441 XLOC_131509 Coding Coding RBM22 7:64054087-64065594 j TSS161928 1729 1 TCONS_00217441_4 420 0.135338345864662 12 0.850773509473318 0.00938795252220185 0.0109764975357047 0.00809246581806372 0.00734838260985194 0.00877054251971212 0.00489899879727023 0.00143962916177814 0.00528592065936208 0.00498552841766022 0.00228105219548106 0.00169112521451332 0.00104137029806857 0.00221574380848732 0.00054822614235678 0.00132838139800728 0.0170235231731119 0.00876564728966377 0.00853902873743462 0.00612484645896243 0.00918774664338026 0.0041182525743443 0.00887235553554441 0.00562246073297192 0.00176116106388818 0.0112025301664462 0.00801207995110187 0.00738412727969978 0.00110956457345855 0.00196162806810145 0.004426382452062 XR_235317.1 RBM22 PREDICTED: Bos taurus RNA binding motif protein 22 (RBM22), 0.0 3088 100.00 0.989589358010411 NM_018047.2 RBM22 Homo sapiens RNA binding motif protein 22 (RBM22), mRNA. 0.0 2006 92.09 0.802197802197802 TCONS_00217441_4 sp|Q9NW64|RBM22_HUMAN RBM22_HUMAN Pre-mRNA-splicing factor RBM22; 0.0 874 100.00 0.997619047619048 3 coding 0 0 0 0 -0.134770445952106 0.27475110680384 0.0122319692517052 0.847777687120761 GTGCCGAGAGGCAGCCGCGGGGCCTGACGGGATTGTGGCGGTCCTCTCCCAACTCGGAAGCTGCGGCTGCCTCCAGACGCTCTCAAGATGGCGACCTCTCTAGGTTCCAACACCTACAACAGGCAGAATTGGGAGGATGCGGACTTCCCTATTCTGTGCCAGACGTGTCTTGGAGAAAACCCGTATATCCGAATGACCAAAGAAAAGTATGGGAAGGAATGCAAAATCTGTGCCAGGCCATTCACAGTGTTTCGCTGGTGCCCTGGGGTCCGCATGCGTTTCAAGAAGACTGAAGTGTGCCAGACCTGCAGTAAATTGAAGAATGTCTGTCAGACCTGCCTCTTAGACCTAGAATATGGTCTGCCCATCCAGGTTCGTGATGCAGGATTGTCTTTTAAGGATGACATGCCAAAGTCCGACGTCAACAAAGAGTACTACACACAGAATATGGAGAGAGAGATTTCCAACTCTGATGGAACGCGGCCAGTTGGCATGTTGGGGAAAGCCACATCCACCAGTGACATGCTGCTCAAACTGGCCCGGACCACACCCTACTACAAAAGGAATCGACCGCACATTTGCTCCTTCTGGGTGAAAGGAGAATGTAAGAGAGGAGAGGAGTGTCCATACAGACATGAAAAACCAACAGATCCAGATGACCCCCTTGCTGATCAGAACATTAAAGACCGATATTATGGAATCAATGACCCTGTGGCAGATAAACTCTTGAAGCGGGCTTCAACAATGCCACGTCTAGACCCACCAGAGGACAAGACTATCACCACACTGTATGTTGGTGGTCTGGGTGATACCATTACTGAGACCGATCTAAGGAATCACTTCTATCAGTTTGGAGAGATCCGGACCATCACTGTTGTACAAAGACAGCAGTGTGCTTTCATCCAGTTTGCTACAAGGCAGGCTGCAGAAGTGGCTGCCGAGAAGTCCTTTAATAAGTTGATTGTCAATGGCCGCAGGCTCAACGTGAAATGGGGAAGGTCCCAGGCAGCCAGAGGGAAAGAAAAGGAGAAGGATGGAACCACAGACTCTGGAATCAAGCTCGAGCCCGTTCCAGGGCTCCCAGGAGCGCTTCCTCCTCCTCCTGCCGCAGAAGAAGAAGCCTCTGCCAACTACTTCAACCTACCCCCGAGTGGTCCTCCGGCTGTGGTGAACATTGCCCTGCCACCCCCACCTGGTATTGCCCCACCTCCACCCCCAGGTTTTGGACCACACATGTTCCACCCCATGGGACCACCCCCTCCTTTCATGAGGGCTCCAGGACCAATCCATTATCCTTCTCAGGACCCTCAGAGGATGGGAGCACATGCCGGGAAGCACAGCAGCCCCTAGCACTCATCACCGCTCTGGGGCTCTACAGAAGAGAGGGCGCTTAAAAATCCTAAGAACATAGCCAGGGGTTCACTTGGCGAAAAGTAAACTTTGCCATTCCCAGACCTCGGCTGTAGAAACACCTCACCCACTCAGAGCTATGAACTCTGTCCCATCTGCTGGCTGAATGCACAGGAGGATGATCTCTGGAAGATGGCAGTCACACAATGGAAGGAGGCTGGGTTCCTCTATCACTGCTAAAAGGAGAGCATTATGATAGGAATTTTTGTTAGAGTAAGCCATTGAGTCCTGAGGATCTATCTGTAACAGCAGCTAGTGTTACTCTCATAAAAGATGTCAGATCTGATCACAAAAAATAAAGAAAACTCATTTTTTATTT EMBV3_12538 GGCCTTGATGCTGGTAAAGATTGAAGGTGGAAGGAGAAGTGGGTGATAGAGGATGAGATG Gene BVV0102_003510 + 0 NULL GK000010.2:2078952-2161054 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17201 GAGAGGATGTTCCTGAGCTTCCCCACCACCAAGACCTACTTCCCCCACTTCGACCTGAGC Gene GeneID:512439|HBA:NM_001077422:8_cdna Constitutive 0 NULL GeneID:512439 25 GENE HBA HBA2 MGC128174 alpha_globin hemoglobin, alpha 2 EMBV3_02368 AAAGAACAAATGCCTGTATGCCCTGGAGGAGGGGGTAGTCCGCTACACTAAGGAGGTCTA Gene GeneID:510058|MRPL27:NM_001037453:82_cdna Constitutive 0 NULL GeneID:510058 19 GENE MRPL27 MGC133547 mitochondrial ribosomal protein L27 EMBV3_13238 ACCCGGTCGCCTTCCAGAGGGCCTTGCAGGCTGCAGTACAGAAATGGAGATCAGAAGGTA Variant GeneID:100126047|NUDT6:NM_001105650:2_cdna 270^651 3 EMBV3_00758 GeneID:100126047 17 GENE NUDT6 MGC157079 nudix (nucleoside diphosphate linked moiety X)-type motif 6 EMBV3_40853 TGCCTATGTGTTTTATGTTCTGAGAGATGAAGCCGAAGAACTGCCGTGGATGGTGCCCAG Gene GeneID:788059|LOC788059:XM_002699941:105_cdna Constitutive 0 NULL GeneID:788059 X GENE LOC788059 NULL hypothetical LOC788059 EMBV3_31586 AGATTGGCGTCAACACTAGGGAAGCCGAGAAGCTGAAAGACAAGGAAGTGGCTTTCTGGA Gene GeneID:508916|CES1:NM_001046018:159_cdna Constitutive 0 NULL GeneID:508916 18 GENE CES1 MGC129084 carboxylesterase 1 (monocyte/macrophage serine esterase 1) EMBV3_21245 GGCTCAAATTCACCACAAGGAGGGAGCTAGTACAGTGCCAGTATTAAACACAGCGCGAAG Gene GeneID:506246|FGFR1OP:NM_001077859:2_cdna Constitutive 1 NULL GeneID:506246 9 GENE FGFR1OP NULL FGFR1 oncogene partner EMBV3_05826 ACGACAGCGACTCCGACATGGCCTTCAGTGTCAACCAGTCCTCCTCGGCATCTGAGTCAT Gene GeneID:510912|NEURL1B:XM_002696271:73_cdna Constitutive 0 NULL GeneID:510912 20 GENE NEURL1B NULL neuralized homolog 1B (Drosophila) EMBV3_35399 GCTCCCCTGGCCACATGAGGACGGAATCAATAAGCAGGGGGCTTTTTTAGCCTTTAGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33599 CTGACTTCTAGGGGGAAGATGAGACCAGCAGCAGAGGGCTGAAGGTGGAATTCTGGCTTT Gene GeneID:508078|DENND3:XM_002692572:253_cdna Constitutive 0 NULL GeneID:508078 14 GENE DENND3 NULL DENN/MADD domain containing 3 EMBV3_21765 TTTAATCTTTGTACACCTTCCATTTTTAAGTGCTTAAAATGAGTACTATATTGCAATAAA Gene GeneID:614026|RANBP9:XM_002697582:445_cdna Constitutive 2 NULL GeneID:614026 23 GENE RANBP9 NULL RAN binding protein 9 EMBV3_05576 TCTTGGCTGCTTCAGCTGTAGCCCCATTCTAGGTCCTGTGACCCCGGCCTCAACTATTAA Gene GeneID:524806|MAPK8IP1:NM_001102508:75_cdna Constitutive 0 NULL GeneID:524806 15 GENE MAPK8IP1 MGC148898 mitogen-activated protein kinase 8 interacting protein 1 EMBV3_17755 GGTAACCACACTCTTAACTATAACATCCAGCTGTGCCCCCACACACAAAGGCTTGCACAC Gene BVT0102_388256 + 0 NULL GK000021.2:45998596-46065545 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00124342 TCONS_00124341 1 XLOC_075889 NonCoding TCONS_00124342 XLOC_075889 NonCoding NonCoding - 21:46003555-46005351 - TSS93101 1796 1 TCONS_00124342_2 98 0.990534521158129 1 0 0.000227266115552737 0.000207011768446666 0.000247322945868487 0.000235808394039985 0.000148502319348316 1.99167336953783e-05 0.000211058303841668 0.000138317189088416 0.000612847274270396 0 0 0 3.1951040637804e-06 0 1.71085638457285e-06 3.9003294516345e-10 0.000369761213297487 4.67728997578379e-11 0.000511652634420145 0.000564582921753366 0.000472718827737177 0.000260301411624172 9.77448578935424e-12 4.82370827491551e-05 0.000430435717005037 0.000346501508013036 0.000130493113295983 1.06959097034729e-05 0 1.04328966550598e-10 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 3e-54 217 89.09 0.0913140311804009 NM_198844.2 ZPBP2 Homo sapiens zona pellucida binding protein 2 (ZPBP2), transcript 4e-53 214 72.10 0.237750556792873 0 noncoding 0 0 0 0 -0.194328020623726 0.164270049313674 0.0349668606206191 0.646188767040737 AACGGTACATGAACCGTGACCTTCCGGATGTTCAAACTGGATTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCTCTGGATCATCGAAGAAGCAAGGGAGTTCCAGAAAAACATCTAATTTTGCTTTATTGATTATGCCAACGCCTTTGACTGTGGGGATCCACTGGGGAACAGCAATCCACTGGAGAAAGAATACTCTTTCTGAAAATGGTGCTCTGCAACGATTCTGTATCCACATGCAAAAACATGTATCTATTAATAGATACAGACCGTTATCTATCACAGAGTTAACTTACATTGGATCTTTAAGTTAAACTTCACTTAATGTGAAACACCAAACTGTAAGACTTCTAGACAATAACATAAAATCTAGGTGACCTTGTGTTTGGCAATGAGCTTTTAGATAAAACACCAAAAGCACAATCCATGAAAGAAAAAATTGATAGACTTTTAAAATTGAAAACTTCTATGAAGACACTTAAGAGAATAAAAAGACAAGGCCAGACTAGAACACACACGTGTTTGGTATCCAAAGGATACCAAGGACTGGTATCCAAAATACATTAAGAGTTCTTTGTATGTGTGTGCATATTAGTTACAAAGAATTCTCAAAGCTCAACAATAAGGAAACAGACACCCGATTTAAAAGTTCACAAAAAATCTAACAAATTCCTCACTGAAGAAATATAGATAGTGAAGAAGCATGTGAAATACACTCAACATCCTATGTCCTCAGGAATTTCACATTAAAACAATGAGATACCACACTAAACATCTTTGAGAATGGAAAACTTTTTTTAAAATCAACAATACCAACTGTTGGTGAGGCTTCAGAGCATCAGTAAGAATGTAAGAGCAGTACAGAGCAGTAAGCAGTAAGAATTCTGATAAGAATGCAAAATGCAACAACTTTGGGAGATAGTACAGCAGTTCCTTACAAAGGTAACCACACTCTTAACTATAACATCCAGCTGTGCCCCCACACACAAAGGCTTGCACACAAATGTTATAGCAGCTTTATCCATAATTGGCCCCAAACTGGAAGCAACCAAGATAATCTTCATTAAATGAATGGAAAACAAACTGGTACACTCAGACAACGGAATATTATTCCGTGGTAACAAGAAAATGAGCTATCAAGCCACAAAAGACATGGAGGAAACTTAAATGCATCTTGTAAGTGAAAGAATCCAGTCTGGAAAAGCTACATAGTGTATGGATTCAACTATAAGACATCCTGAAAAAGACAAAACTGTATAGAGACAGTAAAAAGACCAGTAGTTGCCAGGAGTTTGGAAGGGGTATGTGGGAGAGTGGGGAGAAAAGACTGGTGGAGAACAGGTTTAGGGCAGTGAAACTTATTTGATACTGTAATGATGGATACGGGACATTATGCATTTGTCAAAACCCATAGAAATATACAACACAAGGAATTCCCTTGCAATCCAGTGGTTAGGATTCGGAGCTTTCTGCCATAGCCTGGGTTCAGTCCCTGGTCTGGGAACTAAGATCCTGCAAGCCGTGTGGCTCCACCAAAAAATAAATATAAAAAAGAAACGTACAACGTAATGGTAAACCTAACTCTAAGTATGGACTTTAGATCATGATAATGTATCAATATTGGTCCATTAATTGTAACATATATCACACTAATGTAGGATATTGATAATAGGGAAAACGTGTATGTGGGAAGCTGGATGTTAATGGGAACTCAGTACAATTACCACTAGATTTTTCTGTACATCTAAAACTTTCTAAAAAATAAATCTTACTAATTTTTTAAATG TCONS_00119546 . 3' 2784 TCONS_00119546 . 3' 4579 EMBV3_35635 ATCACCGCTGGGATCCTCCAGACCCACTCCAATTCTAGACCTTGACATTCAGAGACACTT Gene GeneID:539910|TFAP2D:XM_002697279:52_cdna Constitutive 0 NULL GeneID:539910 23 GENE TFAP2D NULL transcription factor AP-2 delta (activating enhancer binding protein 2 delta) EMBV3_21226 AAGCTTGCTACCACACTGTATTGTGATTTTTGCCCTCCACGGGGATTGGGGGATCGGAAA Gene GeneID:282415|CLEC3A:NM_174633:2_cdna Constitutive 0 NULL GeneID:282415 18 GENE CLEC3A CLECSF1 C-type lectin domain family 3, member A EMBV3_01728 CACAGCCCTTGCCAACCACCAGTCTTGTTCCTGTCTCTACAGTTCTGCCTTTCCCAAAGT Gene GeneID:514334|ZPBP2:NM_001075661:130_cdna UTR3_Alt 3 NULL GeneID:514334 19 GENE ZPBP2 NULL zona pellucida binding protein 2 EMBV3_39600 AGCCCGAGGGCGGAACAGATCGCTGTAGTGCCTTGGAAGTGGAGAAAAAGTTACTCAAGA Gene GeneID:540417|IRX3:NM_001104996:390_cdna Constitutive 0 NULL GeneID:540417 18 GENE IRX3 MGC148829 iroquois homeobox 3 EMBV3_26362 TTACTGTGTCTGCTTGGTGGTTAGAAGGGAACTAGAAGCTGAATTCAGGCACTTTCTCCC Gene GeneID:537248|LOC537248:XR_084627:171_cdna Constitutive 0 NULL GeneID:537248 1 PSEUDO LOC537248 NULL similar to ACPL2 protein EMBV3_23972 GGCAGTGTGTCTGAGGAAGTGTAATTTCAGTGCTGGGAGAGGAGTTGGCGTGCCTATATT Gene GeneID:538827|APOLD1:NM_001101180:113_cdna UTR3_Alt 1 NULL GeneID:538827 5 GENE APOLD1 NULL apolipoprotein L domain containing 1 EMBV3_18244 TATGGCTGCCCTTCTGTGAGAATCAAGTCATCCCTCATACCTACTGTGAACACATGGGGC Gene GeneID:511823|LOC511823:XM_002693233:479_cdna Constitutive 0 NULL GeneID:511823 15 GENE LOC511823 NULL similar to olfactory receptor 594 EMBV3_37322 CAAGAAGCTGCGGAAGCTGTTCGAGGCGCAGGAGAAGCTGCACTTAGAGTACCTGCAACT Gene GeneID:515715|CARS:NM_001103249:287_cdna Constitutive 0 NULL GeneID:515715 29 GENE CARS MGC137874 cysteinyl-tRNA synthetase EMBV3_40093 GGTAACTATTCCTCTTCAAGGATTTGCAGATGGGGCAACGTGATATTTGGGTAGGTGGTG Gene GeneID:540464|NEUROD6:NM_001076221:25_cdna UTR3_Alt 1 NULL GeneID:540464 4 GENE NEUROD6 MGC142747 neurogenic differentiation 6 EMBV3_41239 ACTGGTAAAGAATTCACCTTGTTCCGGAGGTCACACAGTTGTCCAAGCGAGTGCAGAGCC Gene BVT0102_225098 - 1 EMBV3_00473 GK000011.2:61482380-61495910 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25734 CGGAAGCTTACAGCCCCTGGCATCCCCAGTGTTTGCCACACATATAACCTTACACTTCTT Gene BVT0102_432797 + 1 EMBV3_08218 GK000005.2:110484830-110486530 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21718 TGGGTGGAAGTGGTTAGTTTGTTCAGAGCTTATTGGCTTTAGAGGATTACCCCAAACTCC Gene BVV0102_173882 + 0 NULL GK000013.2:20613605-20930713 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042189 TCONS_00042191 TCONS_00042193 TCONS_00042192 TCONS_00042195 TCONS_00042188 1 XLOC_025617 Coding TCONS_00042191 XLOC_025617 Coding Coding ARL5B 13:20591724-20619430 j TSS31468 7187 1 TCONS_00042191_1 180 6 0.740804908861216 0.00108250329959382 0.00122464109851469 0.000641485142440062 0.000187940168931529 0.00047007898234294 0.000170355160623712 0.000328032846326914 0.000127956909043875 0.000375953559512552 2.80723539423277e-05 7.86807328634438e-05 1.88757149320933e-19 6.92325976517138e-05 0.000102761303730242 0.000280819937351388 0.00685654171927698 0.00483047591340089 0.00571553747933311 0.000809381018659521 0.00100445860173722 0.000252051356881843 0.00303688031648535 0.0024752915854931 0.00640827846271344 0.000972159721095098 0.000793359072467047 0.000819634443100639 0.000229541872325197 0.000283199306135895 0.000453204686186408 XM_005194276.1 ARL5B PREDICTED: Bos taurus ADP-ribosylation factor-like 5B (ARL5B), 0.0 1.294e+04 100.00 0.998191178516766 XM_005252401.1 ARL5B PREDICTED: Homo sapiens ADP-ribosylation factor-like 5B (ARL5B), 0.0 4929 76.29 0.943787393905663 TCONS_00042191_1 sp|Q96KC2|ARL5B_HUMAN ARL5B_HUMAN ADP-ribosylation factor-like protein 5B; 1e-132 373 100.00 0.988888888888889 7 noncoding 0 0 0 0 -0.183578087093622 0.3090675159732 0.0142431745192548 0.768217373109623 GGCGCCGTGCTTCCGGCGATGGGTGGTTCACAGATCGGGAGGGGAGGCGGAGCGGAGGCGGGGCTTGGGGCTGGTTGAGGCTCTGGTGGGTAGGTGGGTTCAGACCGAGGGGACTACGGGTCGGCGTTGGGCTCAGTGGGCTCGAACAAAGGACTCTCGGCCAGGGACTCGGCGCAGTGCCTTCTGACGGGTAGCTGAGCGGCAGATCGCGGCTTCTCCGCCAACCAGTGCCCTCGCCGCGAGGTCCCAGTCGGCTTTACCTCGGTGCCCCACGGCCGGTCCCGCGGTGGGGGGCCCGGCGCAGCGGCACCTGCTGCTGAGGGACCCCGCGGCCCGCCAAGGTGCTCATGATGGGGCTGATCTTCGCGAAACTGTGGAGCCTCTTCTGTAACCAAGAACACAAAGTAATTATAGTGGGACTGGATAACGCAGGGAAAACCACCATTCTTTATCAATTCTTAATGAATGAAGTGGTTCATACATCTCCAACCATAGGAAGCAATGTTGAAGAAATAGTTGTGAAGAACACTCATTTTCTTATGTGGGATATTGGTGGTCAAGAGTCACTTCGATCATCCTGGAACACGTATTACTCAAATACAGAGTTCATCATTCTTGTGGTTGATAGCATTGACAGGGAACGACTAGCTATTACGAAAGAAGAATTATACAGAATGTTGGCTCACGAGGATTTACGGAAGGCCGCAGTCCTTATCTTTGCCAATAAACAGGATATGAAAGGGTGTATGACAGCAGCTGAAATCTCTAAATACCTCACCCTCAGCTCAATTAAGGATCATCCATGGCACATTCAGTCCTGCTGTGCTTTAACAGGAGAAGGGTTATGCCAAGGTCTAGAGTGGATGACCTCCCGGATTGGTGTGAGATAACTTTTTTGCTCGAAAGAGACTCTATTTATTCTGTGACATGAACCTAGTACATTTGGCTGCTAAAGCAGCAGCATGTTTAATTAATTTATAACAACACAAACCTCTGTGAGCAACACTTGAATCAAGTGCAGCTGAACTGGAACATAAAAGATTTTTTCTTAACTTTTTTTTAATGCACTAATCTTCAGTTGGATAAACATAATGTATAACTGTTTTCAGCAACAGAATTCTTCAGACTGCTTATTCTAATTATTCAACGACTGCCTTTTAAGAAATATTTGTCATATGTTTAATGTTTTCTGAAGTATTGTAATGACTGCTCCCTCCCCCTACCAGATAATTACCAGTTGTGGAACTTGTCAGGTACTGTTTGCAAACTTATCTAACACTAAATATTTGCTCCCTCTGTAAACCACTTACTTTTGGACAGAACTTTATTATAGAGAAAGAAATATGCCTAAAAGATATATATTTAAGGAGTGGATGAACATCATGAGACCTGCCTTTTAAATGAGTTGCTTTACCCCACATTATTGCAAGTCATGGAATAATTTTAAGTTTCTATTAGCATCTCAATTAAGAAGGCTGTTTATCTTAGAAGAATTAAGTTCAGTTTTCAGCCTACAAGATGGGATTGGTTTTGGTTAAAAACTAATAATAGTAAAATATTTATTTCAAAGCCCAACTTCAATAGTAAATACTTTGATTAAATATGGTATTTTTAAGAATGTCACATTATTCAACGCATATATAACTATCAGAAATTACTAAAGTATACCAGCACTGAAAATATAACAAGGCACTTGAAATATATTTTTACTATCAATTACAAACAACTTTATTATCAGAAAAAAGTTAACTGTTTCATTTGCAAGGGTACCACATCTGCTTTGGGCAATAGCTAAAAAGCAGAATAATAAACAGTTCATTTTATTTCTTAGGATTTCAAATTGTGTGATAGCATCTCTACCACCAGCAGTATATTACTTAAAAAATCCATGTCTTTGCTTAAATCTGTTGTGGTGTAATAGGCTTGAAACGATTAACATTTGTGTAATTATGCCTCGTGTTCTAAAATCTTTTACTAGATTATAGGAAACTGCTGAACTTAAGCGTGGCTTTTAGAATATTACTATGAAACTCAAGTTTAATACACTAACAACTTAAACAAATTTTTGCTAGTTAAAAACTCATAATCTAGCAAAAGTTTATTTTATTGAATAACATTAAAATATTTTTAAGGCAGTGTCTAATATGAACAGTAATCTAAATAGTACATACCTTAAGAGGGGGGGAAAAGTATTGTAGTTTTGCTTCTCTTTATTTCAAATGTGCGCTTTTGCTATAATGAAAGGGATAAAACACATACATAGAGAATAATACTTTATTTTTGCAGTATTCTTTCATTTGGGTCAAAAATAGGATTCAGTGTTCATAAAAATATCAATACCTATTCAAAAGTGATATTTTAATATTTTTACTGTAGGTTGTTTAAATTTTGCTGTTTTCAGGTATACTGGATTTATTATACTTAGTCTAAATAATTTAGTTGAATGTGGTGACATTTTTCTGATTCCTATTTAGTGGTAGTACTCCCTGGAACTGGAAATCACCAGAGGAAAACTCGCTGGGCTTTGGGACCTAGTTGTTCATTAACCTTGTTTTCAACCTTTTTCTTAAGTGATACTGTACCAGGTAGAGGGAAATTTTGTTTTTAATATAATGTGTAGTCAGGAACAGGAGAGAAAAGTAGACAAGAATCAACACAGTATGTATGTGGGGTAGAGTAGGGGCAGGAGAAATTATGAAAATCTGTTTACCTAAAGCACACTTGGCCAGAATTTCTATCATGGGTTGTATAGTTTAGCCATGAATACTGGGGATAATTCTCTGAATTCTTTCCTGAGAAAAATCATATTTAATACTCCTGTATTTGTTCTTATTGTGATATCTTTCTTCTTGTATCTAATAAGATTGGCTGGCTCCATTTTCTTCTATCAAATTATATGGTTATTTTTTTATATTACCACATCAGCATTATACTGAAAGTGTTAATAGTCGATTGTATTTTGTCAGACTACTAGTGTAGACTCAAGTTTTCTATTTGATCTTTAAAATACAATTTGTTTTATTTTCTAAATGCTTTAAAAAAATATTTGTTGGTTCTGGATTAGAAATTGTTAGCTGTGTGTTGAAGATGAAATAGATGTCCAGCTAGTTTTGTGCCAACGATTGAGAAAAGTTCAATTAGAAAATTCATGTAAGACTTTTAAAGTTTTTTTTATGGGTTCTCATTAGATATTTCCTCTTATAGTAATATGAAAACTGATTATCCTTTACTCCAAGAGAATGTTTTGACCCAAGCACGTATTTAACATTGAAACATTGATTCTGAAATTTATTGAAAATCAGTCAACTATAAGATACTGTCTGATGAAAAAATGTAAATTGTGATTAGTGCCTTTATCTGAATTTTGAGATAAGTTCTCAATTTTGTATTATACCTGTTCTTTAGAAGTCATAATTGCAGCTCATTATTAATTTAACAATAGTTCAGGTTTCACCCTCCCCGTCAATCCCTTAGTTGCCTAGCAAAATTTCTAATAAGTGGTAGAAGGCAGGGGGACCCACCCATGTTACTTCTGGGAGATTATTCTACATATTTGTTTTTAATTTGAGATAAAGAAACTAAACAAATCTTTGGTTATAACTAAAATGTAACTGTTACCCTTGTAAGTTCAAGGCATTTTTCTTAATTTTGAACATGTTGCATTCTTCCTGTTTAAACCCATCTTTCTTAGCAAAGTCCATTTGAGAACTTTTAGAATTAATAAGCCTTTTTATATGGGAACATAGCTGTGTATTGTTAATGTAATTTAATTCCTTAAAATTTGAAATAGTATATCTATAATCTATTAAATAACACGATTAAGTACACATTTTTGCTTTTAGGTTCTTTGTTAGTATACTTAAAGGTATAATTTTATTCTAGCTTCACTAGAGGAATGATGATAAATTGAAATTTCATTGTTAAAAATTATTTTTTAAATGGATGCTACTCTTGTAACCATAGTCATTTTGATTAAGCATAAATAACTTTCATTATCTTTAGCATAAAGAGAAAACAATTATTTTCCTATGGAAACCAAGAGTGATATAGGCAGTGCTGTAAACATTATTCTCTGAAGAGTGATGGGGAGCCACAAAGCAAAGAAAATTTTAAAACAATAAAAGCTTTATTTTTAAAAAAGTATTTTTGATGTAGTATCTTGGGATGAATTATAAATAGATTTGTCTCTGCCTAGAGTTCATTGAATTCTTAACTATATAAAAGAATACCAGTTGATAAAACATACTGGTATTATACCTAGAATAGATTAATTCCCTTGATATTTATCTTTGAAGACCAACTTTCTGAGCCTAACTATGGCTTTGAATCCAAAACATATTTCATACCTAGTTCAGTTCTAAAGGATCTTTTTTATCTTGTCAGGGTATGGTCCCTTCACGATATAGCATGATGGCTTGTAGCTAGTAGAATGTAGGGCTGGCTATCTAAAGAAGTGGATTTGAATCTGTTTGGCTGTGACCTGTGTGACCTTGGACAATTACTATTGTTCCTGGCCTTCTTACTATTTTTCCCATACTGAAGAAAACTAGAGCAGCAGTGCAACTTTTGGTTTTAAAATTCTGAAAGTTTATATACTACTATTAAAAACTGAAGGAAGAAAAAAACACCCAAAACACAGAAACAAAAAAGAAGCAAACCAGATGGAGGAAGGACATGTAACATGAAATCAAATCTATTATTTGATTCCCACCTTATTATCATTTCGTTTAGTATATCAATACAATCAAATAAGAAAGCAAAGAAACAGCTAGTAACTGCCACTCCACTTAAACTGAGCTAATAGTTAATGAGAATGCAAAAGAGAAAATAAGCCACATATTGCTAAGAAGATATTTAAGCTATTTACAAAACACTATACTAGGAAGTGCTCTCTTCTAGAAAATATCTTGCTTATTTTCCTGGCTTTTACTAATTGGATGGAAGTGGTTAGTTTGTTCAGAGCTTATTGGCTTTAGAGGATTACCCCAAACTCCAGTTCTATGTTGATTTTCCAGTACTGAAAGGATAGTGCAGCCAGGATTGTCAATATTTTACAAATATCATAAATCTGTAAGTAGTTTAGATTCAAAGTCAGTTTTTTCAGTAATGTCTCATCCTTATTCATTTAGCATTACTGTGAAGACTGGCATCTAAAAGCCAGGTCCCCAAAAAGTACTTTTTAAGAGTTTCAGTTAACCAGAGTTATACAGAGAAGGCCAATTAAAAAAACAAATTTTTTTTTAAGCTGCTTTGTATTAAATTCAAGATAGAAAAAATATTGTGTTTCATCACAGACCTAAAATCAGCTTTAAATATATGAAGTCTTGTGAGATGTTTGAGAAATGTTAGAGGTTTAGAAGCATGTGTAGAAACAAAAGTCAAAAAACTTGATAATGTGAGGTTAAAATCTTCAATAGAAAATTTGAATGAAAACAGTGAATTGCCCCCATTCAAAGCACTTAAAACTACTAGAAAATTCAGTCTTACTGTAGAACCAGATGGCCTATATTATTATTTATGTGACCAAAGGATTGAAGACTGATTGGGTTTCTAGAATTTGAGAGTATAGTCACAAAAAGCCCCTTTTGCATTTTTATAAACCAGTAGTCTGCCCCTGCCCCCACCTAGAAATGGAAAAATAATGTGCTATGCATGTCTTCTGGAATTGAAAACAAAATTCTAGAAAAATAGAAATGTTCTCTTGCACAAACTTGTAAAATTTTAATTTAAAAATTACCTCAGTTTTCAGTCCATATGGTGTTGTCCTCCAGTTTGTGTGATGTGGCACCATCCTATTAAAGTCCCCTTCCCCCAAACTGTACTGAAATAGGCAGGTTTCACAGCCAAGGGAGAACATTCCTCAAAGACTGTTTTCTTTTAGTCTAGTTTACCACCAGCAGGACTCATGTGGAGCAGATCCATATACTGTTCATTAAAGCACATGGACAAGTGCTTAGTCAATATTTAATCTGTTTAATTAAAACCAAGTAAGGGAAAGGAAAAACCTTAAAATTTAATTGATTTTTATTATACTGTGAATATATTTCCATCAGTGTTGGTAAGATATCAAATGACTATCAGTTGATGTTGGTTATATATCATTTATTTGTTACCTTTTGGCCATATTCATAAGAGAATATAATCATTTTAATCTTCCATTTTCCTTTAGGAAATTCAGGGACTCTACAGCCCCTATTTTGTTCTCTTGGAGTAAACTATTCAGTGTAGTTATGAAAACTTTTCATTTTGATTTTTCTTAAAAGTTGAGCTGCTGTTTCATTAAAAGTGTGAAATAAAATAATGGTTATGATTTTTTTCCATTATGTAATTATTATAAATTTTACCTTATTGATCACTGTACAGAGGATGGTTAAAAAAAACAAAAAATAAAGCTGAGAATCATTGCAGCCTTGCTTTGTGTTAGTTCTGATCAGAATATCATGATTATAATTGCACGTTGCCATCTTAACATAAATTGGTGCTTTAGAGCATGAAAGAGGAAACAGCAGGCCCTATATAATACACTTCTTGCCTCAGAATGTAAAACTACATTAAAGTGTCTGTATATTTATGTTCATTTCTTAAGATTTAAATATAAATTGTTACCCATGAAGCTTCAGGCTTTCTGCAAACACTGTAACAATATATTAGCTAATCAGCTTGGTAAAATGAAGATGGTGTTAATAAGGCCAAAATTATGAATTGGATCTCTCTGGGGGTCCACTGGTATTATACAGAGGAAAAAAATGTCTTTCATGCCACAAACTGTGCTTCTTAATCCCAACCAAACAACTGAGATGTGTGCTATTGGTGCAGTATATAAGCATTCATAGAATTAAAAGAGCAAATAAATTATTTAATGCACTCACATCATCACTTCTTGAAAGTGATTCAAAACATGTTCTTCTAGTGGTGGGGTTGTTTTAAAGACATGTTTTAACTTTTTAATAGTTTTATTACTGTCGTAAAATGCTTCGATATGTTAAGTTTAGGTTACTGGTACTCATGACTTACTGCTTGCATGCCTACTTATCCAAGTGAAAGGATGCTGTTTGCTCTGGAATGTTCATCTTTTAGACAGGTTTTGGCTCATTTGCAATCATGGTGCAATACAGTGTAACATTGTTTTCAGTCAACAGTTTTATTTTTGTCATAATAAATAATTACTTTTCCAATATGACATGAAC EMBV3_29706 AGCTTTCCCGGGATAAGAAGAAAGACACAGGGATTTAAAGATCCTGTATACCGAGCAAGA Variant GeneID:510583|PAH:NM_001046058:983_cdna 404^492 1 EMBV3_41161 GeneID:510583 5 GENE PAH MGC137073 phenylalanine hydroxylase EMBV3_03346 CAGGTCAAGCAGAAAATCCTGCCACCTCCAAAATGACCTTTGAGCACAGTAAGAGACAGC Gene GeneID:100297011|LOC100297011:XM_002686379:184_cdna Constitutive 0 NULL GeneID:100297011 3 GENE LOC100297011 NULL similar to acyl-CoA thioesterase 12 EMBV3_13282 AGAGAGACACAGCTGGACTGGGAAGCTGAGAGCCTGGGCTGTTACCCAACAGAAGCTGAA Gene GeneID:517903|RHBDF2:XM_002696165:121_cdna Constitutive 0 NULL GeneID:517903 19 GENE RHBDF2 NULL rhomboid 5 homolog 2 (Drosophila) EMBV3_23290 TGCTGCTGGGCCGAGCTGGCATTCACACAGGGATTGGACTCGTGCTCCAGGAGCTGCGTG Variant GeneID:535442|SGSH:NM_001102189:5_cdna 382^463 1 EMBV3_23783 GeneID:535442 19 GENE SGSH MGC159451 N-sulfoglucosamine sulfohydrolase EMBV3_40322 GGCGGCTAATAAGGTGGTAGAATGCATCATCACAAGCAGGTTGACATCTGAAGACGGGAG Gene BVT0102_000864 + 0 NULL GK000019.2:50483974-50537801 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17301 CTCATCCCGCAGCTGAAGGAGAGTCTACAGCGCCTGGCACATGAGTGTCTGTCACAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33650 ACGGTACATACTTGGCGGGGTGTGCTTGCCCCTGCCAGCCCTCAAAAATACAAAGAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03646 GGATAGTGCTGCTTCCTTAGGTTTCACGGGCAGGACCACGACTGAGAGCTCTTCTTTAAA Gene BVV0101_035780 + 1 EMBV3_10251 GK000018.2:18809261-18810540 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082514 TCONS_00085650 TCONS_00082511 TCONS_00082512 TCONS_00082513 2 XLOC_051029 XLOC_051926 Coding TCONS_00085650 XLOC_051926 Coding Coding BRD7 18:18809355-18858230 j TSS63900 3026 1 TCONS_00085650_3 652 18 0.938453983713222 0.000876041437750978 0.000150729977398528 0.00040776571845592 6.82463795977499e-05 0.00065846527913847 8.85972982116877e-05 0.000775443053449193 0.000288242684158987 0.00203708998784007 0.000259824053495846 0.000154673819686419 1.98001962328603e-133 1.20483855022502e-05 1.30056025824353e-05 0.000373835568993968 0.000427684946314055 2.24935455592352e-120 2.83644848008211e-05 0.000208105112526624 0.000347534246952578 7.71788906263803e-05 0.00104142306019551 0.000659840632230001 0.00037465914279044 0.000477168933653473 6.95004728189085e-05 0.000167365356108566 0.000238216489485832 0.000388428650249001 1.22550767619532e-05 XM_005218615.1 BRD7 PREDICTED: Bos taurus bromodomain containing 7 (BRD7), transcript 0.0 4552 100.00 0.833773959021811 NM_001173984.2 BRD7 Homo sapiens bromodomain containing 7 (BRD7), transcript variant 1, 0.0 2915 91.52 0.677461996034369 TCONS_00085650_3 sp|Q9NPI1|BRD7_HUMAN BRD7_HUMAN Bromodomain-containing protein 7; 0.0 1179 92.01 0.996932515337423 2 coding 0 0 0 0 -0.0874303902395337 0.614379288750249 0.0226905475650939 0.681573607449504 GCTCCCGCCCTCCGCTCGCCTGGCCCGGACCGGAAGCGGCGCCGCACGGCCTGGGCCTGGCGCGGGGGGCGGGCACCGGGGCCCGATCGGACATGGGCAAGAAGCACAAGAAGCACAAGTCGGACAAACACCTCTACGAGGAGTATGTAGAGAAGCCCCTGAAGCTGGTCCTCAAAGTGGGAGGGAACGAAGTTACCGAGCTCTCCACGGGCAGCTCTGGGCACGACTCCAGCCTCTTTGAAGACAAAAACGATCATGACAAACACAAAGAGAGAAAGCGGAAAAAGAGAAAGAAAGGAGAGAAGCAGATTCCAGGGGAAGAAAAGGGGAGAAAACGGAGACGTGTAAAGGAGGATAAAAGAAAACGAGATCGTGACCATGTGGATATTGAGGCAGAAAAAGACCTACAGTGTCAGGCCCCTGTACGATTAGACTTGCCTCCTGAGAAGCCTCTCGCAAGCTCTTTAGCCAAACAAGAAGAAGTAGAACAGACACCTCTTCAAGAAGCTTTGAATCAACTGATGAGACAACTGCAGAGAAAAGACCCAAGTGCTTTCTTTTCATTTCCTGTGACTGATTTTATTGCCCCCGGCTACTCCATGATCATTAAACACCCAATGGATTTTAGTACCATGAAAGAAAAGATCAAGAACAATGATTACCAGTCCATAGAAGAACTGAAGGATAACTTCAAACTAATGTGTACTAACGCTATGATTTACAACAAACCAGAGACGATTTATTATAAAGCTGCGAAAAAGCTGTTGCACTCAGGGATGAAAATTCTTAGCCAGGAGAGAATTCAGAGCCTGAAGCAGAGCATAGACTTCATGGCAGACTTGCAGAAAAGTCGGAAGCAGAGAGACAGGACAGACACCTCACAGAGTGGGGAGGACAGCGGTTCCTGGCCAAGAGAGAGGGACGATGCTGGAGACGCTGAGGCACAGGGCTTCAAGAGCCCCAATAAGGAAAATAAAAAGAAAGACAAAGATGTGCTGGAAGATAAATTTAAAAGCAATAATTTAGAAAGAGAGCAGGAGCAGATTGACCGCATCGTTAAGGAATCTGGAGGAAAGCTGACCAGGAGGCTTGTTAATAGTCAGTGTGAATTTGAAAGGAGAAAACCAGATGGAACAACAACATTGGGACTTCTCCATCCTGTGGATCCTGTTGTAGGAGAACCAGGTTATTGTCCTGTGAGACTGGGGATGACAACTGGAAGACTTCAGTCTGGAGTGAATACTTTGCAGGGGTTCAAAGAAGATAAAAGGAACAAAGTAACTCCAGTGTTATACTTGAGTTACGGACCCTACAGTTCTTATGCACCACATTATGACTCCACGTTTGCAAATATCAGCAAGGACGATTCTGATTTAATCTATTCAACCTATGGGGAAGACCCTGATCTCCCCAGTGATTTCAGCATCCATGAGTTTTTGGCCACATGCCAAGATTATCCATATGTTATGGCAGATAGTTTACTGGATGTTTTAACAAAAGGAGGACATTCTAGAACCCTGCAGGAGTCAGAGACGTCATCTCCTGAAGATGAAGGCCAGACTAGGATACTTGACACAGCAAAAGAAATGGAGCAGGTTACAGAAGTTGAACTAACAGGATGTTTGGACTCCAATAATCAAGACAAGCTTACAGCACTGAAAGCAGTAACAAACTTCGGAGCTCCGGTTGAAGTTTTTGACTCTGAAGAAGCTGAAGTGTTCCAGAGGAAACTTGATGAGACCACCAAACTGCTCAGAGAGCTCCAGGAAGCCCAGAATGAGCGTCTGAGCACCAGACCCCCTCCCAACATGATCTGTCTCTTGGGTCCGTCATACAGAGAAATGCATCTTGCTGAACAAGTGACCAATAACCTTAAGGAACTTGCACAGCAAGTAACTCCAGGTGATGTTGTAAGCACATACGGAGTCCGAAAAGCGATGGGGATTTCCGTCCCCTCCCCGGTCATTGCAAACAACCTTGTGGATTTAACGGCAGATTTTGAAGAACCTAGAAAGACTGATGTTACTGAGTGTGAACCCGATGGGATTTGAATCTATCTGATTTCACTTCGAGGATTTATTCAAAAAGTGGCCTTGTGAGGAAGGAATGATGTGGACCTATTGGAACGCCGAGCAGAGAGTGGATGGGTGGGCCTGGGCAGAGTTCCTGCGGAGGAGGGATCGTGCTCCTGCGGAGGAGGGATAGTGCTGCTTCCTTAGGTTTCACGGGCAGGACCACGACTGAGAGCTCTTCTTTAAAATTACCATCCAGTGAGATTCCCGTTGTTACACCATGAAAACAAATGCAACTTTAGAATTTACTAGCGTGTCCCCCACATACGTGTTGAGGACGATGTCCTTATGTGGGAGGACCAGGGCTTCCCACCACAAAAGCAAAACAAAAACCATGTCAGGAGTTTCATAGCACTAACTTGTCTGGTGTTCCTTTTTGGTTTATTTTTGCCATTTGTAGAGGGGTTTTCCCAGTATAATAAAAGGACAAGCCAAATAGGAATCAAACTCAATTGTCCGTGAATATGTAAGGAAATCACCAAGCTTAAGGAAAGTTGATGTTGCTATTTACTGTTTTTCAACAGGTCACCTATGACTCTGCCATGCCCCCTTAACTGAGACTTATCTACTTTATCTGAAAGGCAACGGTTAAGTTCCTGAGCAGTTTAACTATTTAAGTAGGAAATGATACGTGGTCCTTTTCTATGACCAGGCACTAGAGGTAACCTAGTTCAGGGAACAAATCAAGTTTCAGACCCTACTCAGACTGTACGGAGCCCTTGTGTAAAACACCCAGGCTGGAAGCTGTTTTATTATTTTCTTGACTTTGAAAACTAACATTTAACAAGTAGGGTGAAGGAAAATTGAATCTCTCAAGAGAGTTAAGATGACCTAATCTTTCAAAAACATACTTGAAAGCATATGCCAGAGGAATTAAAGAATCCATTCAAATATGTATTTATCAATATTTATCAAGTCTTTTTAGAGTTTGTCTCTCGAATATAATTCAGGCAG EMBV3_10065 CAAACAGTCTTCTGAGAGAAACCAGCTCCTCTGAAAAATAAGAATTCAAAGTAAATGTGC Gene BVT0101_055164 + 0 NULL GK000014.2:17299176-17452953 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36160 CCATGTTTTACATTGGCGCACACCGAGGGCTGATGCCTCCTTTACCAGATTGCTTCTCAG Gene GeneID:538897|YSK4:XM_002685415:23_cdna Constitutive 0 NULL GeneID:538897 2 GENE YSK4 NULL YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae) EMBV3_13345 GCAATTCCCTTTGTTCTGCTCATCCTGAGGTTACCCTTCTGTGGGCACCAAATCATCCAC Gene GeneID:528515|LOC528515:XM_002693239:497_cdna Constitutive 0 NULL GeneID:528515 15 GENE LOC528515 NULL similar to olfactory receptor Olr86 EMBV3_35267 TGAATGGAAGAGGGCACGCCTTGCTCATTTTGCGCCCTGAAGAATTGGGTTTCCTTCGCT Gene GeneID:782091|DDX18:XM_002686649:50_cdna Constitutive 0 NULL GeneID:782091 4 GENE DDX18 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 EMBV3_28049 TTGACTTTCATTTCCCTTGCGGCTTGCCATTTTCTTAGTGTTTTTAACCTGTACATGGTG Gene GeneID:513346|PCDH8:XM_002691767:345_cdna Constitutive 0 NULL GeneID:513346 12 GENE PCDH8 NULL protocadherin 8 EMBV3_22614 ACCACTTACTCATTGGTTAAGAATCCACCGGTCAATGCAGGAGACAAGGGTTCGATCCTT Gene BVT0102_323788 + 0 NULL GK000007.2:16225483-16235811 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215676 1 XLOC_131039 NonCoding TCONS_00215676 XLOC_131039 NonCoding NonCoding - 7:16230142-16231582 - TSS161030 833 0.769507803121249 2 0.422515635858235 0 0 0 0 0 0 0 0 0 4.93937035236596e-06 8.24436663483089e-06 0.000218919647046141 0 0 0 0.00168044877856485 0 3.01211520606517e-05 0 0 0 0 0 4.02510895446175e-05 0 0 7.03379747226874e-05 4.6123279282442e-05 0 0 XR_138726.2 LOC100847934 PREDICTED: Bos taurus uncharacterized LOC100847934 (LOC100847934), 2e-54 217 79.44 0.296518607442977 0 noncoding TCACAGAAATTCAGAGTGTAAATTAGGTGAGGGAAAAGAAGGGTAAGATTCTGGACAGAGGAACCATCTGTCCTGTGGCACTGAAAAGCAAGTCTAGGTGAAGCTCTGAGAGGGAGGAGGAACATGGTGTCAGAAGAGGCTTAACAGAGGCGAGGGAGGCAGACCGTGCAAGCCCAGTGCGCCACATAATTTTCATTTATTAAATACCTAAATACTGCCTTTTAAAAAAAGTTAAAACATTACAGGGCTTAACCACTTACTCATTGGTTAAGAATCCACCTGTCAATGCAGGAGACAAGGGTTCGATCCTTGATCTGGGAAAATCCCGCATGCCACGGAGCAGCTAAGCCGGTGCGCCGCAACTATTGAGCCCGTGCTCCAGAGCCCAGGGACCACAACTGCTGAGCCCAGGTGCCCCCACTACCGAAGCTGTGTGCCCTAGAGCTGGTGCTCTGCAACAACAGAAGCCACTGCAGTGAGAAGCCTGAGCACCGCAGCTACAGAAAAGCCTGCATGGCCACGAAGACCCAGCACAGCCCCAAATAAATACTTTTTTAACAAGGTGACACCAGTTGGATCCCTGATCTGGGAAGATCCCACATGCCATGGAGCAGCTAAGCCGGTGCGCCACAGTTGTTGAGCCTGTGCTCTAAAGCCCGGGAGCCACAACTACCGAGCCCATGTGCCACAACTACTGAAGCCTGTACACCCTAGAGCCTGTGCTCTGCAACAAGAGAAGCCGCTGCAACGAGAAGCCCACGCAGTGAAACTAGAGTAGCCCCTGCTCGCTGCAACTAGAGAAAGGCCACCCACAGCAGAAAAAAACTAACAGA TCONS_00212011 TCONS_00212012 r 3' 4568 TCONS_00215677 s 3' 4225 EMBV3_33514 CTCCCCCAAAGAGAGGGAGAGAGTCAACCAGCTTCGACAAAGAGACCTCGATATGGTGTT Gene GeneID:512520|FHAD1:XM_002694199:705_cdna Constitutive 0 NULL GeneID:512520 16 GENE FHAD1 NULL forkhead-associated (FHA) phosphopeptide binding domain 1 EMBV3_18630 GATCCCAAGATGCCCCACCTGATCCCCAGCCCCTTATCCTCACACTGAATGTCTCCTCAA Gene GeneID:614519|MORN4:NM_001035450:225_cdna Constitutive 0 NULL GeneID:614519 26 GENE MORN4 C10ORF83 C26H10orf83 MGC139597 MORN repeat containing 4 EMBV3_12375 GAAGGGCAAGATCACCTTCTGCACTGGCATCCAGCTTGGCTGATGCCCTCATCAGCTCGC Variant GeneID:282016|PSMD4:NM_001013598:19_cdna 298^557 1 EMBV3_01408 GeneID:282016 3 GENE PSMD4 MGC139713 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 EMBV3_29124 TTAGAGGTCTCCATTCAAGGGCGCAGAGCTGAGAAACTGATCGCCCCTCAAACGTGGTTA Gene BVT0102_321961 + 0 NULL GK000008.2:43874597-43881199 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225140 1 XLOC_137693 NonCoding TCONS_00225140 XLOC_137693 NonCoding NonCoding - 8:43875691-43881285 - TSS168643 2254 1 TCONS_00225140_1 103 2 0.597353835151082 0.000470769390464565 0.000923495843242839 0.000115225409708362 0.000625336488059852 0.000361250802488823 4.95018476326646e-13 0.000173347310957556 8.89597145755998e-05 0.000543533253708403 0 0 2.76383827246422e-38 8.51332531018179e-05 2.82984161547824e-06 9.88042388315482e-05 0 0 0 0.000261966148823114 0.000275460592962515 0.000160175001311043 0 3.7301903108895e-33 8.86306934074379e-35 0.000591520494734921 0.000228155705081382 0.000212341575057519 0 0 0 0 noncoding 0 0 0 0 -0.0132330331167071 0.905654185165681 -0.0376537363606714 0.488622546804515 TCCTGGGGGGGCCGGGCTCCGGTTTGGAAGGGCCACTCCTAGCGCGAGGACCACACCCCAGGGCTGCGATGGGTTCAGGCGGAGTCGAGGAAATTCGGCTGCTTCTCTCTTCTCCCCAGATAGCCCCATGAAGGGGCTTTCTTCCTGCACCTGGTAGGGTGAAGTGGACCTGCGATCCTCACGTTTCCTCCTGGAGGCTTATTCTTGACTGCTAGGGAGGAAAGCACCAGGCGGGCCAGGCCCAGGTGACTGCGTGTCTGGGCTGCTGAATTTTAACCGTATTTTAATAACCACGTTTGAGGGGCGATCAGTTTCTCAGCTCTGCGCCCTTGAATGGAGACCTCTAACAGCAGGGCCACAGCCTCTCCCAAACCCTGCGTGTGCAGGTGTGGGCGTGCCGGGCGCTGTGTTCTTGCCCCTTACCGGCGCTGTCTTCCGTGCGGGGAAACAGAGGCAGGCTTGCCGGGCCTTCCTTTTTTGAATGTTGTTGGCAGACGAAGCGCAAGCCTTTCCTCAGGACCGCCTGCGACTTCCGAGTGGTTGGGGATGAGGAGCGACTTCTCCTCCCTTCCGGAGCACGCGGCGCCCGGGACCCGCGCCCACTCCGGTCTGTCTTCTGGTTCTCACTCCACTAGTGTGCTGTAGAACTAGGGTCTCAAGGATAGCGGCCTGAGGGGCCCAGGGCGCTCTTGATGACCCTGGCCTCCTCGCTGCCATTATCCCTGCTTACACTCCCCCTGCAAAGCCCACGCACGGAGCCCGCATAGCCGTCTCCCGGGCATCTAGTGGAAACTAGATTCCCACCCAGGCGTAGAAATTGAGCCCTCTCCCCGCTTCTTGGAAACCGCATTACTGAACTGGCTTCACGTGCACATGTAGACTACCCCGCATCTGACGCATAGCACCACGCTTGGCACGCTTTATAGAACGTGCTTCGTGTCACAAGCAATCCAGAAGGCAGCCTGGCGAGCGCAGGGTTTTCCTTAGCTCCCGGGACTGGGCCCTATCCGCCCCTCCGGTTGGGGTCGCCGCAGCCAGCCCGCCGCCCCTCTGAGAGGTTGCTCCGGGAACTTGCGTGGGTTTACGTCCTCCTCGCTCCCTCTGCGTACAGGCAAGCGAACAAGGCCTGAGACCTTTGCTGCGCGCCGGGCACGCGCGGAGGGTTGGCTGCTGGAACGCCTGGTGGTACTTGAATTCACAGCACACACATGGACGTTTTCGGGTTGTTTGTTTGCTTCCAAAGCAGTGCAGAATAAAGCTGAGAGGCGCCGACCGGTTGACCATTGCAGCCGACTGGTCTACGCTCCGGATTCGCATTGGATTCATCCAGACCGCCAAGAGATGAATTCAGGGTGTGCTCTCTTAAGTCTGCCAACTGAGAGCTCCGGGATTGCCATCGCCCCTCTTCGCACTGAGCCATTGTGCTACCCTGCGCCGCAGTAACCACTGCTTTTTAGTTTTGTTTTCTCGCATTAGGGGAGCATCTCTGTGCATTTGTGGAAGTATTCTGCTTTAGGCCAAACCTATACACACAGTATCACTTTAAACAGTTTTATGCTGTCATCTTGTGCAAAGGTCCTCTCCCACCCGTACACAAAGACACTGGGGTGGGGGTGGGGAGGCCCCATCCCTTATTCATAACTAGCTTGCTCAGTCCGTGGGCATTTGAATGGGGTGATGCGAGACCTCCGTTTGATCTCTCAAAGACCGTTAGGCAGAACGCAGATCATATGCGGTGACTTTGGGGGCGCTAGCGTGGCCCCTCCATCCGCTCCCTGAAAGTTTAGACCCAGTGCTTAAACACAAACTCCAAAAGAGCACTTGCCGGCTTTTCAGGACAGAGACTTTATTTTTTATTACAACGTGGAGGTGTAGAAAGGTAAACTCTGCGCCACAGAGGGAGGACTATTTTCCCCTTTGAAATAGCTTGCAAAACGGGTCGTCGTCCTTGGACCAGCAGGTTTTCAAAAGCATGTTCTTCTGCAGCGGCAAAAGGGGAAAAACAACAACAACAACAACAACGTTGCAAAAAGAACTCAAGAAAGCCCCCATTTCTCGAACCAGTTCCAATGCCCTACCTCCAACTCCTTCAGCCAGTGGCCGCAGGGCCTGGCTCCCCCCAACTTAAAAGCTCTTCTCGCGCCGGGACCCTAGTGCACCCGCAGCGCTCAGATAGGTTCCGGATATCCCCGAGCCGTGTTTCTGTGGCCAAGTGTGGGAATGAAAGCCGCCTCGGGCCCGGTGCCGCCAAATC TCONS_00227486 r 3' 7961 TCONS_00227483 TCONS_00227484 r 5' 7974 EMBV3_01050 ATACATGACGAAGTGTGGTCACAGCTTTTGTGAATGAGCTCATTCTCAAACAGAAGCAAA Variant GeneID:519896|RFWD2:NM_001103256:142_cdna 568^665 1 EMBV3_04655 GeneID:519896 16 GENE RFWD2 MGC149014 ring finger and WD repeat domain 2 EMBV3_35470 TTCCCGTGGTAGCTGCCCCCAGCACTTTCCTCAAAGGGGTCATGTGGAGTGAGATGTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18920 TCATTCTCGTAGTAGGATCAGAGTGGAAAGTGAAACTTTGCCTTAGCCGCGATCTCGCCC Gene BVT0101_038063 + 0 NULL GK000019.2:24996302-25003844 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095918 TCONS_00092833 TCONS_00095917 2 XLOC_057836 XLOC_056998 Coding TCONS_00092833 XLOC_056998 NonCoding NonCoding - 19:25001041-25003555 - TSS69773 2514 1 TCONS_00092833_4 109 0.402545743834527 1 0 6.4912644353301e-05 0.000123885704437452 4.58708438362663e-09 0 4.21410566440458e-05 0 5.55521170890712e-05 9.40986449069499e-05 2.29331081691273e-09 7.34717138778973e-61 1.40554612273995e-17 0 1.49239692133746e-05 1.44069743198493e-88 3.63401516624041e-80 2.98870680421288e-05 9.78296461467976e-13 0 0.000387450779539421 7.96038273930031e-05 1.87109906503293e-05 1.66482594594382e-10 0.000143091550829977 0.000209505736410561 5.77443150503592e-75 1.65053209698695e-33 6.1981709749785e-10 0.000152805712233946 6.23357634853044e-17 4.46225320173052e-05 XM_002695790.3 ITGAE PREDICTED: Bos taurus integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) (ITGAE), mRNA. 0.0 4531 100.00 0.998806682577566 0 noncoding CATTTATTTTTACTGCTCTTTATTTGAAATCTAACATTTCTTTCAATTACAAATGCAGACAACAAACCACAGGAGTGTCAGTAGTACCTGTATCTTTTTTTGTTTTTTGGCAGTACCTGTATCTTAATACCAAAAGAAATTATATTTTCCCATCACATTATAGGTATGCCTTAAAAAACATTTAAGCTTATCACTACTTCAAAAGTAGCACAGTTATTAGACCTGTTGCTTTAACACCTTTGTAAGTACATTTAATAAGTACATGTGAATATTACAAAAGCACAGAATATGGTCTGGAAGACACGTGCCAGGCCAGTTCGCCTCAGCCTCTAAGGAGGGGCACAAGTCGGGGCGAGGTCGCGGCTAAGGCAAAGTTTCACTTTCCACTCTGATCCTACTACGAGAATGAATATGTATTTAGTAATATTAATACTTACGTAGTTTTTGAAATGTCCTTCCACTGGTCAAAATAAAGTCAACTGGAGTTGGGAACTGTCTCTTTAGGTGCATCCAGCTACCTTCTGAACTCTTGACAGTTGAACAACTGCTCTTCCTGGAGTGACTAAGAGTCCCTTGATTCCATTTACTGGAGCTATTCTTAAAGTAACAGTAAAATTCTGGCACTATTACAAGGTTATAATTAGGGCTGCTACTGCTGCTGCTGCTAAGTCACTTCAGTTGTGTCCAACTCTGTGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCTAGGAGACCCCAAAATACCTAACCCTGATCTTAACCAAATATCCCTGCTTGTATGGATATTAGAGAAAATGCACGGAATAACACTCTAGTGCAGATCATTTTAGACTGCTGGGCTTGGCTGAGTGGAACCAAAATCTAACTGGGCCTAAACAGTTTGACCAGTTTATTACAGATCGATCCCTGAGTTGGGAAGATCCCCAGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTAGAGAATTCCATGGACTGTATGGTCCATGGAGTGGCAAAGAGTCGGACACGACTGAGCAACTTTCACTTTGACTTTTTCGCATCTGCTTGTTTCATCCCTCCATGATCAAATTCAAAGTTCAGATGTTATCATAAGAGAACAAGGTTATCTGGATGAGCACTCACAGGCCCGTAACGGGAAACGAAAACATAGAAACTGAAGGGGCCCTTCCCCACGCCAGTGTCCAGCTGGCCCCTTCTGAGGCCTTTTCTGGCCAGGAGCATGGCCCTGTGGCATGACCCACTGTCCTTGGATCTGTGCAAGCTCTGGCATGTCCTGCTCCCGGGAGGAGGAGGGTCAACAGGAAATGGGAAAGGTCTGGCACTAGACAGGCATCTTTTGGAAGAAAGACAAGGTTACAGCCCAAGTCACAGCCCATGAATTTATACAATGCAACCATGTCTCCATTTCAGTCTCCTCCTCCTCAGGGACTGATTCCTTGTGAAGTCTCCTGACTACGACATTGGTCTAATCCAATCATAGCCCAGTCAGTCAATAGCTTATAGGCAGTCAATGTAAGACTTGACTGTTATAATCACAGTGGGATCTTATTTACAATGAACAGCATAAAAGCAGAGACTGCAAGTCACCTGTAATAATGAAAACCTGGACACACAACAGGGAAATATCTAAGCAAATTTACTTCTTTCTTTTCCTTCAAAGGCATACCTCAGAGACACTGCAAGTTTGGTTCCAGACACCATGACAAAGCAAATATCACAATAAAATGAGTCATACACTTTTGGTTTCCCAGTACATATAAAAGTTATGTCAGGACTTCAGTGGTTAAGAATCCATCTTGTAATGCAAAAGACACTGGGTTCAATCCCTGGTCCAGAAAGATTCCACATGCTGAGAGGTAACTAAACTCATGTGCACAACTACTGAGCCCCTGCTCTGCAGCCCATGAGCTGCCGCTACTGAAGCCTGCGTGCCCTAAGGCCTGTGCCCTGCAACGAGAGAAGCCAAAGCAACGAGAAGCGTGTGCACTACAACTAGAGCAGTCCCCGCCAGCTGCAGCTAGAGAAAGCCCGCACGCAGCAACAAAGATTCAGCACAGCCCAAAAAAAAATTTTTTTGTCAGGCACAGAGGTTAACTTCTTAGACCCCAATAAGTCCTGGTTAGAGAAATAACGATGGGAAAAAGTATAAATATCAGAAAGACTCCCAATTACCATTATGTACAGACAGGACTTTGAAGTCAATGGAAAAGCTATGAAGAAACAGAGTCCAGGGACTTCCCTGGCGGCCCAGTGTTTAGGACCCAGCCCTTTCACTTCGAGGATTCAATCCCTGGTTGGGGAACTGCGAGCCCATAAGCCTCACAGCTCAGCCAAAGACAAACAAAAACAAACAATGAAAGCACTTGAATTAAAGAACACAGAAGGATCGCAGGATTGCTTTCTACATTATATACTCCTGCTTCGCTTGTTTGCAATGATATTTATCACCCATGAAAACACAAACTGTGCCTCTGCACAGCTGAGAGTGGACAGATGCGGTCAAGT TCONS_00095918 r 5' 0 TCONS_00095918 r 5' 0 EMBV3_14937 ACAGATCTCAGACCCCAGGAGGCACGTGAGTTGCCAGCAGTGGACACCACCTAACCAAAA Gene GeneID:618416|LOC618416:XM_002683989:2_cdna Constitutive 0 NULL GeneID:618416 Un GENE LOC618416 NULL similar to Leukocyte immunoglobulin-like receptor subfamily B member 3 precursor (Leukocyte immunoglobulin-like receptor 3) (LIR-3) (Immunoglobulin-like transcript 5) (ILT-5) (Monocyte inhibitory receptor HL9) (CD85a antigen) EMBV3_40773 CGTAGCAGTGGATTCAAATGGAAACATCATCGTAGCCGACTGGGGGAACAGCAGGATCCA Gene GeneID:538617|TRIM2:NM_001083735:22_cdna UTR3_Alt 2 NULL GeneID:538617 17 GENE TRIM2 MGC137696 tripartite motif-containing 2 EMBV3_34943 CAGATCTTCCAGCTGAACTGCACCGTGTCTGAGGAACCTACTGGCATGGATCTGCCGCTT Gene GeneID:533256|UNC5C:XM_002688134:16_cdna UTR3_Alt 2 NULL GeneID:533256 6 GENE UNC5C NULL unc-5 homolog C (C. elegans) EMBV3_12965 ACTCAGGAGGCAGCCCAAATATCCTTGGAAGAGCGCCCCTAGGAGAAACAAACTTGACCA Gene GeneID:100299201|LOC100299201:XR_084007:94_cdna Constitutive 0 NULL GeneID:100299201 21 PSEUDO LOC100299201 NULL similar to ribosomal protein L23a EMBV3_05587 GCTACAGCTGGGGCTGAGGCAAAGCGTTATTAGAGGAAAGGAGAACCTTCCAGCCTGTTA Gene BVT0102_085667 + 0 NULL GK000008.2:17707978-18568933 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227012 TCONS_00224572 TCONS_00224574 TCONS_00224567 TCONS_00224563 TCONS_00224571 TCONS_00224577 TCONS_00224566 TCONS_00224575 TCONS_00224576 TCONS_00224573 TCONS_00224570 TCONS_00224565 TCONS_00224568 TCONS_00224569 2 XLOC_138133 XLOC_137555 NonCoding TCONS_00224568 XLOC_137555 NonCoding NonCoding - 8:17899928-18143893 - TSS168357 1183 1 TCONS_00224568_3 84 0.125950972104818 6 0.995175517699333 0.000221286984866406 0.000386759664565312 0.000673573297030402 3.05065129112439e-05 0.000662632505449816 1.8872205901445e-05 0.000157814523663816 0.000474058817990888 1.63340214934708e-05 1.18910050346708e-12 1.80289861510555e-141 6.03723340219819e-06 4.89031706836053e-05 0.000200082286546864 0.000131023146477703 0 0 0 0.00121137769873456 5.41646328098884e-05 0.000577064380653238 0 0 0 0.000198492839687115 1.08955719849002e-08 0.00012175535702178 1.8159947223412e-12 0 0 0 noncoding AGTTGGTACCATATTGCATGCCAGGAATGGAAAGCAATGACGTTTTCCTCCAAGTGCATTGATGTACAAGGTGAGGCATAAACGAATATTGAAATGCCAGGCATAGTGCTGGACGCTGGAGATCCAAGAGTCAATAAAACAGGGACCCTGCCCTGGGAGACTTCATCATCAGCGGGGAGAGTTGCACCAGTCCCAAGCAAGGAAAGAGGTGTGATATTTATGGGGACCTCTTGGAGACTCCAGCACTGGGTGCACGGACCAGAATGGTGAACACTAAAAATCAAAGGCCTGAAATAAGGGGAATCAAAATATACCCTGGAAAGACTTTTGGCAAGGGAGCAAAGGCATGGGCCTGAGAGCCTCATCACGAAAGGATTGCAGGCTGGAGCTACAGCTGGGGCTGAGGCAAAGCGTTATTAGAGGAAAAGAGAACCTTCCAGCCTGTTAGGCATGAGTGAACAGAAACGATATCTGCTGTTTTGAGATGAGAGCCCTGGTGGAAAGAGACGCTGCCGGTGCCCGCTCACATGGGAGTAAGGATGCTATACCACGACAAAGAACCTTTGTTCAACTTGGAATTATCGAAGCTGGAAACCAAGAGGTTTTAATAAACTCCATGGGAGAAAAAAAAAAGATACGACCTGAAATTGAATTTTTCTGGCACCTCTCTGCAGAATATCATCTGATTCTGGGCAATCATTTTGAGACAGCTGACTTGGGTCAGAAGAGCAGTCTGTGACTGTGGAACTGAGCAGATTTCATTGGAACAAAGTGATGGAGGGATGGAGAAGGACCCAACTCAAACTTTAGGTTTCTTGTATCCCATGGAGTCCAGCCACCTACAAGTCAGTCTCTCAGAAGACACCAGAGATGAGATCACTCTCCAGGGGACACAAGCCTCTCACATAATCACCTGCTGGTACATTTTGGCTTGCTAAGCCTGATTCGTTTGTGAAGAGTGCTAATGAGGATGGGCATTTGCTTGTGTGGACAGGCTAAGGATGGTCCAGCATCCTTAAGTGGTCAAAGGATAAGACGGTTCTTCTAAGAAGAACCAAGATGTCATAGGGGCTGGACTGCTCAGTATTGTTGAGGAATGCCAACAGAAAGAATTCTGCAGAACACAGAAAATGTGATTGTCTCCTTGGGTCCATATTTGGAAAATCTAAAGATGAATAGGTAT TCONS_00227010 r 5' 321763 TCONS_00227010 r 5' 321763 EMBV3_09279 GTTTGCTTGTAAATATCGCTCAGTACTATAGGACTAAGTTTCTATAAGACTATACCTGTG Gene GeneID:515285|CEP76:XM_002697749:259_cdna Constitutive 0 NULL GeneID:515285 24 GENE CEP76 NULL centrosomal protein 76kDa EMBV3_31024 AGTCCTCTTGCGTCCCACTGTGGTTCGGGGGGCTGCCTGGTCAGAATGGCCGTGGGATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11399 AAAACAACACTCAAGTGCTCATCAACTGCCGTAACAACAAGAAGCTCCTGGGCCGCGTGA Gene GeneID:514932|SNRPD2:NM_001034476:229_cdna Constitutive 0 NULL GeneID:514932 18 GENE SNRPD2 MGC128077 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa EMBV3_40962 ACCTACGAGGACTATGTCGAAGGCCTTCGGGTGGGAGATTGTGTATGTAGCCCGGACGCT Variant GeneID:281341|MYL6:NM_175780:893_cdna 313^568 10 EMBV3_07082 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_14756 TGCTGCTCAGAAAGGAGTTGGTTCAGTATGCAAGTTCCCATGAAGCCATTTGGTAGACTC Gene BVT0102_400789 + 0 NULL GK000009.2:77158235-77215759 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03254 TGAAGGAGCCACTCTGGCTGAAAATAAAAGGTCCTAATGTCTCTTCATGAAATGTTCCCA Variant GeneID:531278|TTC33:XM_002696357:20_cdna 361^442 1 EMBV3_34103 GeneID:531278 20 GENE TTC33 NULL tetratricopeptide repeat domain 33 EMBV3_30857 GCTCCCCTGGCCACATGAGGACGGAATCAAATCCTCGGGCTTCCGCTGTATGGCTATTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20379 TGGGATTTTAAATAACTTCTGATTCTTGAGTGGTCAATAGAACCCAGAAGTTTACATTAC Gene GeneID:532175|RBM46:XM_002694310:8_cdna Constitutive 0 NULL GeneID:532175 17 GENE RBM46 NULL RNA binding motif protein 46 EMBV3_20512 GTGGAGTCACGTGTCAAGGCTCAGCTGCAGGCCCCAGGCCCGGGTGTGGACTTCATTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16084 CTAACCCACCCCCCTGTATTTACCATTTCCTGTTAGTAATCCATATTGCAGTCAAACTTG Gene GeneID:789836|ZNF583:NM_001083534:70_cdna Constitutive 1 NULL GeneID:789836 18 GENE ZNF583 MGC148707 zinc finger protein 583 EMBV3_24099 CACGATCATGTGCTGGATATTGTGTTGCCACCTTCATTTTGGGAATTGGAGATCGTCACA Gene GeneID:282306|PIK3CA:NM_174574:5_cdna Constitutive 0 NULL GeneID:282306 1 GENE PIK3CA NULL phosphoinositide-3-kinase, catalytic, alpha polypeptide EMBV3_24816 CACAGAGTCACTGTGTGTTAATAATAAGTGTTGAGATGGCTTCTCCGTGTTTCTAGAAGC Gene BVT0102_022402 - 0 NULL GK000024.2:6408634-7303046 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139755 TCONS_00139756 TCONS_00139759 TCONS_00139757 TCONS_00139754 TCONS_00139758 TCONS_00139760 1 XLOC_084978 Coding TCONS_00139757 XLOC_084978 Coding Coding SOCS6 24:7299120-7327710 j TSS104465 5497 1 TCONS_00139757_2 453 3 0.807828185665815 4.44172263980685e-12 4.64341166747403e-17 1.69887652040075e-10 1.51632176819432e-22 1.0147949930403e-10 3.15810714044142e-10 5.17836234027880e-09 0.000168922889673082 1.53086352733532e-17 1.02541487583647e-10 1.78773694762545e-12 3.41569413037134e-05 0.000135413218178902 0.000125356882794539 2.0364632254836e-12 0.00439266026754613 0.00072244000849279 0.0010446211591333 8.44742872527099e-18 1.71226268792512e-12 2.27241566246164e-05 7.50134475075725e-09 0.000549267877322749 2.55764962860791e-05 9.1374034275284e-24 4.99816077468982e-24 3.68207147289999e-12 0.000100348132520068 9.41876780590199e-05 0.00016290389425022 XM_005224062.1 SOCS6 PREDICTED: Bos taurus suppressor of cytokine signaling 6 (SOCS6), 0.0 9654 99.45 0.985082772421321 XM_005266783.1 SOCS6 PREDICTED: Homo sapiens suppressor of cytokine signaling 6 (SOCS6), 0.0 4062 80.12 0.826268873931235 TCONS_00139757_2 sp|Q9JLY0|SOCS6_MOUSE SOCS6_MOUSE Suppressor of cytokine signaling 6; 4e-143 424 97.07 0.450331125827815 2 coding 0 0 0 0 0.0311097215496734 0.84683783229072 0.0153888711425031 0.747458449464566 CTAGGTGACGTTGCCTGGTCTCTGTTTCCTGGTTTGCCTCCTTGATTTGATGGAGCCCATCTTCATAACTTCCTAGAAAGACAGTGACTCTAGAGGGGTAATGAAGCTGGGAAAACGCATGGATGCAGCCTCGCCTGCAGCCTGCCCAGATGTTCGCGGATAATCTCCCCGAGAGAAATTGAGCCCCTCGGATCAGGTAGCTCGTCAGAATGAAGAAGATCAGCCTTAAGACCTTCCGGAAATCTTTCAATTTGAGTAAGAGCAAAGAAGACGCAGAATTCATGGTCGTACAACAGCCAGCACTAGCCGGCGACTTTGGCAAAGAGGAGTCCTTGTTCGGGAGCTGCTACGGGAAGGAGATGGCCGGCTGCGAGCTGCACGGCGAGGACGAAAAGGGCGGCGGCGGCAAGAACCGGGCCAAGAGCGAGAGCCTCATGGGCACGCTGAAGAGGCGGCTGAGCGCCAAGCAGAAGGCCAAGGGCAAGGGGGGCGCGGCGGCGGGGGGCGCGGCGGATGAGGACACCTTCTCGTCGTCGTCGGCGCCGCTGGTGTTCAAGGATGCGCGGGCGCCGCGGCCCATGCGCTCCACGTCACTGCGCAGCCACCACTACAGCCCCACGCCCTGGCCGCTGCGGCCCACCGCCTCGGAGGAGACGTGCATCCGGATGGAGGTGCGGGTCAAGGCGCTGGTGCACTCGCCCGGCACGGGCCCGGCTCTCAACGGCGTGCGCAAGGACTTCGGTGAGCTCCGCCCGGCGGCCGAGCCCGCCTGCCCGTGCCCGGAGCCACCCGCCGCGCCCGGGAGCCCGGCGCCTGTGGCTGGGGACCTGCGCCTGCGTCTGGGCGAGCACGTGCCTGTGGTCCTGGGCCTGCTGCCTCAGGACTACCTCCCGTACACCGTGCCTTTGGACGGCTCCTCCCCGATGGNNNNNNNNNNNNNNNNNNNNNNNNCCGGCCCGGATGCCCACGCGGCCGACAGCGTGCGCTGCCACTTGAATTTTGACCCCACCTCAGCTCCCGGGGTGGCCAGGGTGTACGACTCGGTGCAGAGCAGCGGCCCCCTGGCGGTGACCAGCCTGACGGAGGAGCTCAAGAAGCTGGCCAAGCAGGGCTGGTACTGGGGGCCCATCACGCGCTGGGAGGCAGAGGGCAAGCTGGCCAACGTGCCCGACGGCTCCTTCCTGGTGCGGGACAGCTCGGACGACCGCTACCTGCTCAGCCTGAGCTTCCGCTCGCACGGCAAGACCCTGCACACCCGGATCGAGCACTCGAACGGCCGGTTCAGCTTCTACGAGCAGCCGGACGTAGAGGGGCACACGTCCATCGTGGACCTAATCGAGCACTCCATCAGGGACTCGGAGAACGGCGCCTTCTGCTACTCGCGCTCGCGCCTGCCGGGCTCCGCCACCTACCCGGTGCGGCTCACCAACCCGGTGTCGCGCTTCATGCAGGTGCGCTCGCTGCAGTACCTGTGCCGCTTCGTCATCCGCCAGTACACCCGGATAGACCTGATCCAGAAGCTGCCCCTGCCCAACAAAATGAAGGATTACCTACAGGAGAAGCACTACTGACAGGACCGCAGCCCGGCATCGTGCACTTTGGGAGTGAGAGAGAGAGACTGAGATACAGTTTACAGACTCTTCATCGCCATCAGAATCTTTTGCTGCCATATTCTTTATTTCAGTTTTATGTGTAAAAGAGTGTCCAGTCCATTTAGGGGTGGGGAACCGTCCGCGAGGTGTCTTGGGTTCATTTTCGTTCTTTACAAAAGGGAAGTCTGGAGGTTTGAGGAGGTGTGAAGTCTCTTCCATCAGCGCGCAGAATAATCACAATGTGAATGATCAGATTCTCCTTACCACCCACCCCCAGTCCTTTGCTGCTATCCACTGTGATTTTATGCATTAAAAGCACATTTCATGTGTATCCAATCCTGAGTAAAGTTGAATGAAACTTGCAGAATGAACCTGTTATGTCTCTCTTTCAATGGCCCATCTTCAAAGATAGTGTTGAGTCAGCATAGCTATGTGATTAATCACAAGAGTTTACACCGACACTGAAAATGATTTTTAATTTCATGCTCTACAAAGGTTTATTTACAATTGTGAACTGACATAACCTTGGGTAATGGAAGGCAGGTCTGCGACATATCTTTCTGCCACATTTGTTTCTAAATTATGTTTGAGGTTGTGCTGTCTTTTGGTTCTGAGAAGCTGGATTTTTCTGTTGCCTTCATTTTCATCTTGTGGTTTGTCTGTTTTTAATAAATGGCCTTACATTAAAAAGTTGTAAAGAAATGTATACCACCAATTTAAAAATTGTTGCCTTTTCTGTCATTAAACTCTGGTACAAATTGGCATAACGTATAAAGACCTATGGAACTAGAACTATTAAAGAAATTATTAGATGACCTTAGTTTCCTGTGATAAGCAATTGTTTGTTATCTATACTTTGCTCTGGTAAAATGTTTTATCTGTAATTTCTTTAGCTTAGACAACATTTTCTTGGGTGAACTTGATGTAGAAATGCTTTTCATAAATGGACTAGATCCTCTTGCAACATTAAAGTCTATATAGAGTTTTAAATTGATCTGAATAGAAAGAAAATGTTTTAAAGTTAGGTTTATATTTTTCTTTTATGTATTCACCATTAAAACGTGCTAGATTTAACACTTCCTTCCCCCACCAAAAAAAAGCAACAAAACCAAAAAATCCCAGTGACTTTAGTTTAAAAATTGTGGAAATTGTGGCGCACCGTGTAACAGAAGTGTTAATACCGAATCAGGTGTGTGCATTTGCCTACCATATATACTGCCATTTATCCATAGGGTTTCTATTTTTTATTTAGCCAAGTCTTAAGTAAATTAGCATCACTAATTTTTTCATCTCTTTTGATTCAGTCCTTTGCGGGGTGAGGGTAGTATGTTATATCCAATACTTTTTAGTTATTTTGAAATGCAGTGCTTATTCACTGCAGATTCTTTAGTGTTTTGAAATTGTTCCATCCAGAAGATGTTTCTAGCTACATAACTTTAAAGGAAATGTTTCCCCTTCCAATGAAACATGTAATTTAAGACATTTCTTCCTTTTCCTATCTCTTATCCTCATTAAAAAAAACAAACAGAGTAAAGGTCTTAGGTCAAATTTAATAGCTTTGTCATCCAGACATATCAGTATCCCCATTTTTTTTCCTGTTTTTTTTTTTTTTTAGAGTCAGCTGAGAATTACCAAGAAAAGGCCCAGTGTATTAATACCTGTGTTATGGTATTTGACTTAAAGGGGAAAAGGTACTTAATTTTGGTGGAATGTTTGATTGTACCTTGTTGCAAAGACTCCTCTTTCATTTTCTGATATGTTTTCACCTAATAAGATTGAATATGGAGTATACTGTAATAATATAATTTAAGTGTTCATTATAAGCTATTTGGATTAAGAACTATTACAGAGTTGTAAACTTGTTATCAAATTAATGCAAGACATTTAAACTATTTTTTTGCAAAACTATTTATTTTTAAACAATTTAAAATATATCTAGGGTGAGTTAAAAGTCCCTGTGCATCTATATTAGATGGCAGGTATTGTCACAGAGTCACTGTGTGTTAATAATAAGTGTTGAGATGGCTTCTCCGTGTTTCTAGAAGCATTGACATGTACTCTTTGTGAGACCGTGGTGCACAGAGGTCTTTGGACTGCCCTGAACCCTGTCTTATGTGGGCATAGCCTGTTCCCCACACCTTCTTCATGATAACCATGTTTTTAAGATTGAGCCATTTGGTTTCAAGTTAAGATCATTCTGATTTCCATATAAATGTCTTGAAAATTGTATTTTGTGTTTTTATGGAGGGCAAGTCTTGATACTGTTCTAATTCAGAAAGCCAATTCGTAGTGTGCTTCTGTATGTTCATAATATAAAATTCCTTTAAGTAAAATGCCCTATTCTAATCCAGTTTCAGATTTCTAGGGTCTGATAGTGTATCAATAAAAATAAAAGTGTTTGCAAAGAAATCATTTACAAACAGAGAGGAATATCACAATGTTTTTTGCTTTTGTTTAGGGAACCATTTGGCCGAGGCAGCACAACATAATGTGAACAATTGGCTTTATAGGCTAGTAAAACGGTCTGGTTAAAAATGGAAAGGAGAAAAAGAGAAGTCTTCATCCTGTAGTTTTTGTGCAGGTAGCATTTGGGTGAATTTCTGGATTCTGCTGAATGGTGGCTTAGATGACATGGATGCTGCTTGTAAGTGATTTCTTCAATGTTTGCTTCTGAAAATCTGAGCTCAAGGCAAGAGAAAGAACACAGGAAAGCTGTATCCTTCTGCCGTATGAAATGAATCAGAGTTGCTTTTTATCAAATATCTCATCCCAGAAACATGATGGAAGCCAGAAGCTATTTCCAGGCTTCCTAGGACACTATTGTGCTTTTTTTTATTTTTATTTTTTACAAATAATAAGAAAGCATAGAAAGTACTTGAAAAAGTCTCCTTTCTCTAAGGAAAACTGTGCCCCATTTTGGTGCAATAATCTGAAAATTTTAGAAGGTCAAAAAATGTCACAGGAAACGATCATAGAATTTAAAATAGTTTTTAAGGAAACCAGCTACACAGGGCAACCATCTTGCTGTTAAAAGAAATCATGCCAAAAGGCTAAACCATTGGAATATAGGAAATATAACCCAAGTACAATATACAGGATAATTTCTGAGCCAGTATTACTAAAACAGGATAAAAGTTACTGACATCTTCAGTAGGTTATATTCAGTGTCCCTGCTAGTGCTACCAGTCCGAATCTCTTTCTTAACAATGCTTTCAGAAATGCCAATTTTGATCATTGTACAGTTCCCATTGTATATGAGAGAGATTTGCTTTATGAATGATTCAAAATAATCCGTTTTAAATCTTCATGGCTTTTCATCCAATGTGAAGTCTTAATTTGAAATCACACTACCAGCAATAGACAGTTACGTTGAAAACTCTAATAAGGAACACTTGCCAGTTCCATAAGTAACTTTAAAATTCTAAAACAAAGATTGGTACGCTAGTGATCACAAATTCGGTTTAATACTTTTTTAATCCTGTAAAGATTTTTTATAAACATCCTTTTTATTAATCAGTCATAACATGGCAAATGTGTAGTTGCTGTTTCTGAAAAGTGATCCAAGCTCTACTTCCAGAGATGATGAAAAATTCTTATAGAATTTTGTACTAAGTATACGTGTTGGGTTAAAGAAATTTTATAGTCGTCAGAGTGCCATGGAATTAATACCTGCAATCCAGATTGCTGTAGTTTACACTTTTTCTGTATGTTTCGAATCAGGTGTGTTCCATTTGTACTGAGAACACCACAGAATGAATTATCCAAAGTCCATTGATTTTAATACGTGTTTTGGTTTGTAAACAAACTATAGTAATTTCTTGCACATTTTTGGAGATTAATCGTATAAAGAATTTATGTATCTGCTTCTAGATACAACATGTAAATAAAAATTTCGTTCACAAGAT EMBV3_20303 GGCCTGGGACATGTGGACTATTTTTAATCAGGAGTGGGGGAAGGGCGGGAAAGCCTGCAT Gene GeneID:617754|SHISA4:XM_002694176:621_cdna Constitutive 0 NULL GeneID:617754 16 GENE SHISA4 NULL shisa homolog 4 (Xenopus laevis) EMBV3_02060 GGTGCTCCCTGCACCTGCCCTGACCCTCTTGATGACATACAGTCTCAATATAACAGCCAT Gene BVT0102_433324 + 0 NULL GK000027.2:40051877-40131408 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09197 TGGACACCAGAGTGTGTGGGTTAAGGTCAAGAAGTCAGGAAGGAATGAAAAGAGGCGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34854 GGTGGTTGGACATGTGGTGTCTCATTTTGACCTTTCCCGAACTCTTCTGGTTGGAGGCTT Gene BVT0102_125315 - 1 EMBV3_21284 GK000024.2:49590612-49610403 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140487 TCONS_00140488 TCONS_00140486 TCONS_00140489 1 XLOC_085139 Coding TCONS_00140488 XLOC_085139 Coding Coding C24H18orf32 24:49608406-49616077 j TSS104846 4291 2 TCONS_00140488_5 106 0.177114891633652 3 0.440938722294654 0.000887405687403171 0.000694073837453076 0.000983322870814128 0.000468098393962016 0.00039590826055077 0.000282194588281988 0.00022096412340964 0.000655801742306305 0.000508038648432874 7.57000963645649e-05 0.000102639755590623 0.000127782459931626 0.000133718142892016 0.000291161573377529 0.000156579264222882 0.000579456203876535 8.94554317011879e-05 0.000466204758836551 0.000435459636986001 0.000306524431788824 0.000150352529374156 0.000761542972850883 0.000251237834203772 0.000887266095155797 0.000649859862189213 0.000629779312431541 0.000306923895361593 0.000129021314906017 0.000222285035729108 0.00024375447535619 NM_001195062.1 C24H18orf32 Bos taurus chromosome 24 open reading frame, human C18orf32 (C24H18orf32), mRNA. 0.0 3606 100.00 0.465625728268469 NM_001199346.1 C18orf32 Homo sapiens chromosome 18 open reading frame 32 (C18orf32), 0.0 877 77.46 0.253087858308087 TCONS_00140488_1 sp|Q3ZC78|CR032_BOVIN CR032_BOVIN UPF0729 protein C18orf32 homolog; 3e-50 156 100.00 0.986842105263158 1 noncoding 1 0 1 1 -0.174144299899226 0.227435236103229 -0.011709140997462 0.86989425411541 GGTGAGCCGCTCGCAAACGCGCCATCCTCCGGGCGCAGCGTCCTGAGTCTACCTCGGCGACGGGGTACCTAGTAAAGCGAGCGATTCCGCCTCGCCTGCAGGCTCGACTGACGGCTGCGGCCGCGCCGGAAGTCGTCCACGCCCCCGGCGGGCGTCCCCGTTACGTCCGGCCCGTCGTCAGGCTGACGCAGACGCGCCTTTGTCAGCCCCTCCTGCGGTGCCATTGGCTCGGCTGCGGTGCGTCCCTGCGACCCTCTTTCCGGAAGCGTGGATAGTGCCCGTGGGATTTGTGGCCGTTTAGGAACTCACATCCGGGACAATGGTGTGCATTCCCTGCATCGTCATTCCAGTTCTGCTCTGGGTCTACAAAAAGTTCCTGGAGCCATATATATACCCTCTGATCTCCCCCTTTGTTAGCCGTATGTGGCCTCGGAAAGCTATACGAGAAACCAATGATAAAAACAAAGGCAAAGTAGACTATAAGGGTGCAGACATAAATGGATTACCAACAAGAGGACCAACAGAAATGTGTGATAAAAAGAAAGACTAAACTGATTGTCCCGAAGGATCTCATTGTTATAAAAATGGACCTGATACTATGAAGCACCTTCTTTGTAATTGTCTCTGATCTTTTTCCAAGACCAGAATTTGGGTTAGATATTAACAGTTTAGACATTTACCTATGCTAATCAGGGAATACCTGGTATTTGTATTTAAAATGTAGCTAGTTATATTTAACAACCTCATTTCTGATTTCCTTTTTCATTAAAGTAGTTTTCATTTCTTTTATTTCAGTTTTAAAAATATGAATAAATATATAAGGTTTGTGCCAGTAGACACTGTTACTAAGTCAGTACCTAGAAATTCTTGGGGGCTCTAGCTTTTTTTATTCAGGCTCTTCAAATTTGAGGAGTGTAATTTTACTGTGAAACATTGCAGTGAGACTGTGCAGTCAAATGAAAAGTAGTTTTGGGAAATGATAATGACTTGAAATAAAGATGTAATTACTGTCCAACTCAAAGGAGTAGCTTATCTGTGAGAATAGTAATTACTATTTATTGCTCTGAGGAAGATAGAAAAGACAGAGGAATAGGGGAAACCTCTCTGAAAAATGGAGCATCTTTTACATAAATGTTTAATGTGTAATATAAAATTCTAATCCTTGTTTTGTTCCTTCTGTTCCTACAAATGTATTAAATATTGAGTTTAGCTTGTTGTTCTTTTTTCTTTTAGATATTTAAAAGCAAGATTTTTAACCACTTCGGAAAGCAGGATTGGAATAATGTGATGGCATCAGGATAGTTATGGGGCAGTGATACTTTCTTCTTTTTTTAAAAAAAATTTAGATTGTGTCAGTTATTTTGTTCCATAGTAATACACCCTAAAATTAGTGGTTTTTAGCAATAGTGATGTGACTGGTAAGTTACTTGCTGGTCTGGGCCTGTCCGCATGGTCTTTCATCCCTGGGCTTCTTCCCCCTACTGTTGAGATATACAAATATTCAAAGATGACAAGACATATCTTTATATAATGTTTGTGCTCTCTGAAGCAAGGAGAAATTAGAAGGAACTCCCCACCTTGGGTCCCCAATGAAGTCCTGGATCTTAACTGAGGCTCTGTTAAACTGTGTCTGGTTAAGTCATTGATCCACCTTGAACTTCCTTTGATAGAAATGAGTCTGTTTCAGCTTTTCTACCCCAGCGCACCTGAGGGATTAGATAAATTTCTGTTAGCTAAATCCAGTTGATTAATTTGGATTGCTTTTTAAGGTATTAAAAACTATATTGTGAAAGTAGCAGATGTTCATAGTAGAGCAATGCAAGGACAGGTTAAATGAAGAATGAATGTTCTTTCTCAACTCTCATTCCTTTATTCTGGCTCCAAAGATGGTAACCACTATTAGCTTTTCCTACAGGCGTCTAGCAACTTTGTTAAAAATAGTTTTTATTAAACATACCATTTATTAAAAACCAAATAATATTGCAAGGTTTATGATATCCTTATTCTCATAGTCCCCAAAGGATTTACTCATTTAGCTGTTGCTTTTATCTCATGACTTATCTTCATATTTCTAAGTGATACATGTATACAGTTTTGGGAGCTATCAGCTGTAAACATTACTGACTTCTTCCATGACTGAGATATAGCTATTTTACACTATATTCCCTCTTCTCCCACCCATCCTCCAAATACTATTTTTGTAAATTTTGAGTGAAAATTTGCAAAATTTTACCTGTTGATCAGTATGTATATCATTATGTGTGCTCTAGATGTCTTCCATTTGTCCCTCCAAATCTTTGCTTCCCTCACCCTACCCTCCTGCTCAAGAAAGCTGTACGGACTACATCAGCGGGCTTCCTGTGACCTCTGGGATCTGTTGGTTTGGCCAGTGGTATCTGCAGCAGGAGATGGGAGAGAGTAAAGGAAGGTGTGAGGTCAGGGTATTTTTTCCCTTGGGTCCTTCCCTTCAAGGTGTCTTCAGGTCAGATGTGTTCCTCAGCCAGAAGTCACTGAACCTCATGGTGACCAGCTCCACACGACTCCTTCCAGTTTCCACTAACCTCTCCCTCTCCTTGCTTCTTTGGCCCTAGGGGTGATGGCATCTGTTAGTACTGGCTCTGGGTCACTGCCTTATCTCGCAGGTACCATCGTCTCCTTGCTGGGATACTGATAGGATGAGCAGGTGACTACGGCTCACTGTTTGGCTTGTGAGTTTAGTGCGATCAGTTTCCTTTCGCGGAGCATTGCTTTCCTGCTTTTCCTCTCCCTTTTCTCCCCCTATGCTTCCTCTGTTGACTAGTTGCTGCCTGGGTGCAGGGCACAGGGGAAGTCCTTAGGACTTCTCTTCACCACTCCTGTGTTGCATCTCTTGTTCCCTGGATCCCACATCTTCCTCTGTTGGTTTACTCCTTCATTGCTCCTGAAGCATACCAATTTTTCTAATTCAGTACTGAATTTCATAAAGTTAATATAGATAATTTTGGAAAGTGATGGCCTATATCATCCGAGTTCATTTAAACCTACCTTCCTTAGAATTGCTGGTCTTCTAAGGCCATTTCTACTTCTAGCAGTCTCACATTAGAGAGAGAGACTAGTGGTTCCCAATCTTGTATTTTTATATACCACTAAAATATATATATATTTTTTAAGAAGTTGAGCGGATTTCCCTGGTGGTCCAGTGGTTTAGAATCCGCCTTGCAATGCAGGGGATGCAGGTTTGATCCCTGGTCAGGGAACTAAGTTTCCACTTGCCACAGAGCAACTAAGCCCAAGTGCTGGAGCCTGAGTGCTGAAATAAAGAGCCAGTGCTGCCAGAAATTTCTTAAAAAGTAGAAGAGGATGATCCATAGTTAGGGGAAGCACACTGACTGAAACCGCCCACCCTGGCCAGGCACCATAGGAACCCATTTGCATGAGTTGTTTTACGACAGGAGGTCCTGGTAACACAGAACTAATAAGCCTCCAACCAGAAGAGTTCGGGAAAGGTCAAAATGAGACACCACATGTCCAACCACCTCCCAGAATCCTCTCTGGCATTCATCTTGGCTGAACAAGGCATGCACCACCAGAAAGGACTCCAGAGTTAGAATGATTGGCTAAAGACAACCCAGAAACTGATCCCATCACCATAAAACTCAAGACTGCAAGCCATGTGACAGCTGTTCTCCTGGGTTCCCTTACCCTACTGCTCTCCACCTGGGTGTCCTTTCCCAATAAAATCTCTTGCTTTGTCAGCACATGTGTCTCCTCGGACAATTCATTTTCGAGTGTTAGACAAGAGCCGGGTTTCGGGTCCTGGAAGGGGTCCTACTTTCTGCAACATAGTTGCCAACATTTTGTTTTGCCAAGTGGGACTATATTAAAAGGATGTGATTTATTATCACCATTATTTCATAAAAGACATTTTGACAGCAAAAGAGTGAAAAGGAACATGGGAATAAATAACAATAGCCCATTAACATGAATACATTTATAAAGGATATCTTCTTGTTTTCATGAGAAATTCTCAATTTTGGCCATGTTTTTCTTTTTATGGTTGCTGAAAAATCATCTATCCTCGGACTGGATTTGGTAGTAACATGTCAGTCTATATTATATATATGCTAAGTGTAGAGTCTAGGATTCCAAAGCCATACCCTTAAATTGACTTGAAATATTGACCCCCTGCAGAGCAGTCACGGTGGCTGATACCCTTGTCAGACAGACCTTAGTGGGAATAATGGGGCAGAAGTGGAGAAGAGTGTAGACTAATTAACATTGACTTGTTTTCAAGATTTGATTCTGCTCACCC EMBV3_39657 GCCCAGGGCTAAATATCTGGGGTGAATATCATCTGGGGAGGAAGGTCAAAGACCCTCTTG Gene GeneID:282491|BOLA-DMB:NM_001040481:53_cdna Constitutive 0 NULL GeneID:282491 23 GENE BOLA-DMB DMB major histocompatibility complex, class II, DM beta-chain, expressed EMBV3_18124 ATGGCTCCAGAATGAGAGGTAGGAAGCTGAGGATGAGGCTTGACCCAAGGTCTGTCTACA Gene BVT0102_367378 + 0 NULL GK000016.2:46215457-46249162 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11088 CCCTCTATGGGTGGGGAGAGAAACAGACGGATACAGGAAGCCAGAAAACTCACAACGTCT Gene GeneID:532798|LOC532798:XM_002698761:14_cdna UTR3_Alt 2 NULL GeneID:532798 28 GENE LOC532798 NULL similar to Uncharacterized protein C1orf96 EMBV3_01093 ATCATAGGTAAGGCATTTCCCCTGGTAACAGAGTGCATGGGCTTTGGAAGTGGCAGCCAT Gene BVT0102_055377 + 1 EMBV3_17507 GK000003.2:30786647-30810107 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24100 ATTGTCCCATTGCATTAGCACTTACTGTGGTTTCAGGTCTATATCTACCAAAGGACAAAG Gene GeneID:538535|C7H5orf24:NM_001076110:40_cdna UTR3_Alt 1 NULL GeneID:538535 7 GENE C7H5orf24 C5orf24 MGC152153 chromosome 5 open reading frame 24 ortholog EMBV3_40738 AGCTCTAGTTGTCAGGCAGTCACCTCAAAATGGGAAGGCTGGCATTCAGGAGTTGGCACT Gene BVV0102_118792 + 0 NULL GK000018.2:64695906-64707984 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084963 TCONS_00084960 TCONS_00084970 TCONS_00084964 TCONS_00084962 1 XLOC_051762 Coding TCONS_00084963 XLOC_051762 Coding Coding ZNF304 18:64689040-64702272 j TSS63565 9365 1 TCONS_00084963_1 431 0.381954084356647 4 0.292494898344796 7.23312466622429e-09 1.51295226161111e-08 0.000884522868935016 0.000889792409757072 0.0010057750697711 5.91453153070741e-09 0.000421539976603726 0.000785284774473542 0.000989059222300929 4.10905160447775e-05 2.38774886845368e-05 0.000157135356259663 3.21117112811107e-22 3.04005207899569e-05 0.000156694012271177 0.00123871381955682 5.90611579048203e-06 0.000134522775494338 0.0013499233197768 0.000944789454897664 0.000345422397341776 0.000502603257550927 0.000340471606792751 0.000459278798948309 9.70934411496528e-08 0.00137306596969656 0.000965258617593187 8.71549591277433e-05 0.000113221869736812 0.000342013575993794 XM_005219788.1 ZNF304 PREDICTED: Bos taurus zinc finger protein 304 (ZNF304), transcript 0.0 3032 93.73 0.21388147357181 NM_020657.2 ZNF304 Homo sapiens zinc finger protein 304 (ZNF304), mRNA. 0.0 1442 79.09 0.181633742658836 TCONS_00084963_1 sp|Q9HCX3|ZN304_HUMAN ZN304_HUMAN Zinc finger protein 304; 0.0 626 74.88 0.986078886310905 6 coding 1 1 1 1 -2.85316194306991 0.0111830921172671 -0.00150179142889403 0.975493456604337 GGTAATAAGGTTGGGGCCTCCGTCGGCGACCTTATTACGATCCATGGTCGCCGCCGTGGGACGGGCCGCCTAGCGCGGAGCGGTGGGCTGGGGCTGTACTCCTTCCCAGGCCTTCGCGCTCGCTCTCCGTCCTCGTTCGCTTCCGGAGGCGGCACCCGGAGCCCGTGCGCCGTTTTGACCAGGAGGAAACCAAGGCTCGGAGCTCGACCGTCGTCCAGGGCCCACCGCACCCAGGGGGTGTGCGGGTCCCGCTGCTCCCACTCCAATCGCGTTTCTCGACCTGGTTCTACTCACAGGACCCCATGGCGGCTGCGGCGCTAATGACCTGGGCTCAGGGTGGTGTGACCTTCGAGGATGTGTTTGTGTACTTCTCCCGGGAGGAGTGGGAGCTGCTGGAGGAAGCTCAGAGACTCCTGTACCGCGATGTGATGCTGGAGAACTTCGCACACGTGGCCGCCTTGGGTTGTTGGTGTGAAGCAGACAATGAGGAGGCCCCCTCCGAGCAGATTGTTTGTGTAGAAGGAGTGTCAGAGGTCAGGACTCCTGGGTCCTGTCCACTTATCCAGAAAGTCCATCCGTGTGAGAGAAGTGACCCGCTCTTAAAAGACATTTTCCACTGGGCTGAACACCAGGGTTCGTGCCCTGCACAGAACCTGGACACACGTGACCCCTGTGGGCGAGGATTCCTGTTGAGTGAAAACTTTCATCAGCACCAGAAACCACATAGTGGGAACGATCCCGTCCAGGGGGATGCTGATGAGGCCTCATGTGTGAAGAGCTGTGCTGTCTATGAGTTAGGGAGACCTTGTACTTGCAGGGGGAAAGGGATGGACATGCTGGATAGCTCTAGCCTTTTCCAGCACCAGAGCACTCACAGTGGACTGAGTCCACACAGAACAGCTGAGTTTGCGGAATCATTTGCACACAAGTCGAGTCTCAGTTGTCACCAGGGAGACAGTGATGAACTGATGTTTTTCAGTTGCACTGACGATGAGAAAGCCTTCATGAACGCCTTCAGTCTCCTCGACAACCAGGTAACTCAGGCGGTTGAAGTGCAGTCCTTTAGGTGCCTACCTTGTGGAAATCTGTCCAACGAGAAATCCACTCTTATTCATCATAGAAAACTTCATGGTGGGGAAACATCACATGTGTGCAGGGAGTGTGGAAAGGCCTTCATTAACTTGTCTCACCTAAAAACTCACCAGAAATTTCACACTGGCAAAAGACAATATACATGCAGTGAATGTGGAAAGGCCTTCAGCCGCAAAGACACACTTGTGCAGCACCAGAGAGTTCACACTGGAGAAAGGTCTTATGACTGCACTGAATGTGGAAAAGCCTACAGCAGAAGCTCCCACCTCGTTCAGCACCAGAGAATTCACACCGGAGAAAGGCCTTATAAATGCAGTGAATGTGGAAAGGCCTTTAGTCGTAAAGACACACTTGTGCAGCACCAGAGATTTCACACAGGGGAAAGGCCTTACGAGTGCAGTGAATGCGGAAAATTCTTTAGCCAAAGCTCTCACCTTATTGAGCACTGGAGAATTCACACCGGGGCGAGGCCTTACGAGTGTATTGAATGGTGGGAAATGCTTTAGCCACAATTCTAGCCTCATTCTACACCAGAGAGTTCACAGTGGAGCGAGGCCTTATGTGTGTAGTGAATGCGGAAAAGCCTACATTAGTAGCTCCCACCTTGTTCAGCACAAGAAAGTTCACACTGGAGCGAGACCTTATAAGTGCAGTGAATGCGGGAAATTCTTTAGCCGCAACTCTAGCCTCATTCTACACCAGAGAGTTCACACTGGAGAAAAGCCTTACGTGTGCAATGAATGTGGGAAGGCCTATAGCAGAAGCTCCCATCTTGTTCGGCACCAGAAAGCTCACCCTGGAGAAGGACCTCATGAATGCGGCAGTTTTGGTGACCCTTTAGCTGCGTCTCTTAAACTTGTTTAACACCTAGAAACTTCACTGGGAGAAAGGCCTTATGAATGCAGTCAATGCACTATGTCCCTGTTCAAGATTATAGGAGTCACAGCAGCAACGGTGGGAATCATTGTTGGTACAGAGACACTGAGATAATGGAGTGGGGATGACTGAGGCTCGTGAGGATGGGTGTTGTTAAGGCAGCGTCTCTATATGTCCCTGCGATTTTGGCTCTATGGCATGAAAGTATACATAAATTCTCAGGGCCTTCACACGTCTGAGTCTCCTGTGGCCAACACACTGTCTCAGTAAGTAAAGGTTTGTGGATTCCTGTACCTCCCTGGGCTGTTGATGTTCTGGCCATCACTGCACAGGCAGGAACCCCAGCAGTGACAGAAGAAAGATCCAGGGCTCAGGCTTCTCTGACCAGCCAGCATTCCTAGTGACTAAGGTGGATGTGGCCTTCATTGCTCTGCAGTTTTTGCTGATCCTGAGGCAGGGCTTATGCTCCTAAATTGTGTAGAGAGGGATATGGTAGAACCAGAACAGTTGGCAGATGGGACTTCCCAAGAAGAGTGGTAAAAATGGATATTTATGGGGAATATTTAGCTCCTAACATCTTTGTTGAGGTATGGTGACGTGAAATAAATGGCATGTATGTAAAGTGTGAAGCGTTTTTCGTTTCAGCATGTGTATATTCTGATGAGACCACACATCAAGATAATGGAGACATCCAACACAGCCAAGAGATTGCTTGGGTCCCTTATAATCCTTTCCTCCTTGTCCTTTCTAACCCCTCTTCCCCACAATTGACAAGCAGTAGCAAGCATATTCTAGAATTTCGTGTAAACAGAATTATATACTTTGTGGAGAGTGGGGACTCTGGCGCTTTGCACCAACCATAACTTTTTGACATTAAGCCATACTGTTGCACGTATCAGTTATTCATTTGTATTGCTGAGTACTGCTCCATTGTATGGATATACCACGCGTGTTCTTTTACCCATTCGCCTGGTAGTGGGTGTTTGGGTTGTTTCTGGTTTGGCTGTTACAAATAAAGCAGCTGTGAAGATTTGTGTATTAGTTATCATTGAATTACATTCCATTGTATGGATGAACCACAGTTTGCTTATCCAGTCACTGACTGAAGAACATCTTGATTGCTTCCAAGTTTTGCCATTTATGAATAAACCTGCATTATGCATTGTGTGTAAGTGGACGTAAGTATTCAGTTCATTTGGGTTCAAGCCAAGGAGTATGATTTGCTGGGTCATACTAAGGGTATGTTTTCTTTTTTTTTAAACTTCGTTTTTTTGGCTGTGCTGTGTCTTCATTGTCATACACAGGCTTTCTCTACTCGTGGCAAGTAGAGGATATTCTTTTTGTTCTGGTGCGTGGTTTCACACTTGGGTGGCTTCTCCTGCTGCAGAGCATGGGCTCTAGGCCTGCGGGCTTCAGTAGTTGCCACACAGGCTCAGTAGTTGTGGCGCATGGGCTTAGGTGTTCAGCGGCATGTGGGATTCTTCCCAGACCAAGTACTGAACCCATGTCCCCCACACTGGCATGCAAATTCTTAACCACTAGACCACCAGGGAAGTCCAGTAAGACACTGTCTTCCATAATGGCTGCAAAAAATCATTTGCATTCCCAGTAGCAATAGATAAGAATTCCGTTACTCTGTGTCTTTGTCAGCATTTGGTGTCATCAGTGTTTTGGGTTTTTGCCAAATAGGTGTGTAGTAATAGCATGTTGTTGCTCTAACTGCAATTCTGTAATGACTTATGATGAATATTTTTTCATATTCTTTTAACAGTGTCTTTTGCTTTCAGAGCAGAAGTTTTAAATTTTAGTCAATTCCAAGATACTCAGTTTTTCTTTAATGGATTGTGCTTTTGGTGTTGTAGCTAAAAACTCCTTGCCATACCTAAGGTCTTCATCATGTCCTGTGTTATCTTCTAGACGTTCTGTAGCTTTGTATTTAGGTTTATTATCCATTTTCTGAAAATATTTATGGAAAGTGTAAGATTTGTGTCTGGATCATTTTTTAAAACCGCATTTGTTGAAAAGACTATCCTTTCTCCATTCCTTAGCCTTTGCTCCCTTTCTAAAGATCACTTGGCTATATTAGTGTGAATGTGTGGACTCACCGTTCCAGTTCTTTCCATTTATTGTGATAATCACCATATGGCTGTGGGGGCTTTTTTCTTGTGTCTTATTTATATGGTATATTTCATTAATTGATATTCAAATGTTAAACCAACCTTGTATTTCCTGGGACAAATCCCACTGGATCATGTTGTATATAAGTAAAAGCTTAGTATAGTTCTATATAAATTCTTTGTGTCAGAATTGATAATTGGTATCTTTCTAGGAATTTGTCCATTTTAACTACATTTTCTCATTTGAGAGGGTTAGGATTGTTTATAATATTCCCTTATGAGACTTTTAAGTTCTGTAGGGTCAATAGTGTCTTCACTCCTGATTTTGTTAATTTGTTATCTTCTTTTTTTGTCAGCCAACCTAGAGTTTTGTCAGTTTTGTTCATCTTTTGAAAGAGAGTTTTTCTTTAATTGATTTCTAGAAAAAATTTTTTTTCTGTATTCTGTTTCAATGTTTTGTTCTGATCTCTTTTATTTCCCTTTTTAATGCTTGCCTTGTGACTAGTTTTGTCTTATTTTCCAAGTTTCTTAACATGGAAGGTTAGGTTATTGACATCATTCTTCTTTTGTAATAAACTTTAAAGCTTTATGTTTCCCTCTAATCACTTAATTTGGTTGTATCACATCAATTTTTATATGTAGCATTTTCATTTTTATCTAGTTAAAATATTTTTGTTCTTAAAATTTCCCTTGTAATTAGGGTATTGAGAAGTATATAATTTAACAAGCCTCTTCCTATTGAATTTGCAGGGGTAGTCAGAGGAAGGCACGTAATTTTTCAGTCAGTGACCCAGGTGTTACTCTTGAAATGGGGTAAATCTGTGGGTTATTTGAAATATCTTCCACCCTTAGGAAGACATTGAGCTAAGATGTTGGTGTTTAATGTAGAAAAAGTAGTCCCGTGTTTAATGTAGAAAAGTAGTCCCATATCTACCAGGAACTGATGAGGATGACCAAATATAGTTAACTCATGTTTCGTGAAAGAGTATGGCAGGTTATTGGGTGTTGTTCCTTCCTCAGAGCACCCTGACTGTCCTGATTTGAGGGATTTTCTTTGTGTTAGCTTTTCTTCATGAGATAGGACAACCTTTTAAGTTCTGTTTTTGTATTAGGTCTCCAACCTGAAGCTTAACATCACTGTAAAATGACATGAAACAGATACTCCTACATCAGCACCTCTGTGACTCCCAACTGTGGAAATTAGGAATTTTCCCTAGTCTGTTGTGACAGTCTCCTGTGGGTTAAAAATGCCTTTGTTTTAATGGTGAAGTTGTTACACAGTCCACTTTTGCTGTTACTGCTTCAGCGGTGGCTTCAGGAGGCTTGGGCCGATGCCTGGCCTTTCTGACCCTCAGGTTCATTGTGGAAGCGGGACTCCCGCTGGTCCCTCCCTGACCAGTCCAGGCAGTTCTTGCCACCTTTGACTTTCTGTCTTAGCTTCTAACCAGGTTGTGTAAGTTCGGTGACTTAGGTTAGATGTACCGTAAAGAATTATAAAAAAATTTTTTTTAAAGGATTCTAAAAATTTTTAATAATTGCTGATTTTCCTTGGGTTGAAGAGAGTCTTTACTTATACCTCTTAATTCAGCTTACATCCAAGGTTTAAAATCTACAATTTCTTGCATTGCTGATTCGTGGCTGGCATTGATCTTTAGAGGTAACTGGCATTTGGGGTTTTAAGAGAGCTGTTAAGAAAAGGTGGTGAAACTGAGTCCCACTAAACTGAGTTCCCCTGCTGAGTTGATGATTAACCTCTCTATCCAAAACTGTTCCCTTTCTTTTCCAGTCTTACCTAAATCTTGTGCTAACTGAACACTAATCAGCCAGTCAGATGACTAAAATTGCTGTTGTTGATATCATTGTTAATGTACAGACCGGAGTGTTTATCCAGGACAAGACGAGCTGACAACTTCTAGGTCGTGGACCACCAGACCAGAGAACCATAAACCATAGGCATCCTTATTCCTGAAACTGACTAAGAAATGTCACAAGATGGTGATCAAGCCCGGCTTTTTTGTTCTTCCCCTCTAGTAACCCCTAACCAAGACCAACTTGCAGTGGCCCATTCCCTTGGTTAGTGCCCCACAACACATCCTTAATTTGCGGCTGCAAACAGTGTCAGTCTGACTTTTGCGTAATAGTAGGGAGTCAGCAAGGAAAAGAGCAGGGGAGAGGGGCTAAGAAGAGCGATCAGAAGGATAAGGGGCAGGACAGAAAGCTGAATGTGGGAGGGGAGAGGGCTGGATGTAGGCGGAGGGCCCCGGATGTGGGAATGGAGAGAGAGGAGTGTGGGGGGCAGCTGGAGGTCATGGAGATGGTGGGTTTACAGGGCATTGAGTCTCCCTGTTCCTGCTGAAGCTTGTCTGCTTGCTTAGTAGGTTTGGCCAAGGAATCTTTAGTAATGTAACTTTTATTTCAGAATTTAATTTGAGGCTTCTGTGTACTAATAAGAAAGGCTATCCATTGGGCCTGAGAATTCTAATTATTTAAAGAATTCCTTCATTTTCAAAGGTGTCTCTCAAATGAACCTTTTTGTTCAAATCAGGTGTTCTCCTGAGTGGTCATTGAGGGCTTAAGTCATCCTTGGTACAGTTATCCTATTCAGCACGACAGGCACAGAATTAGGACTGTAACAGAGATAGGAAACAGAGGGATTTTTCAGGGGAGAGAAGATTCGGACTCAGACAACCCCGAGGCCAGGCGGTGGTCACTAGGAATGCAATTCTTGTGGACATTCGTTTCCTAACCTGACGTTCGGCCTCCTCACCCCACAGACCCACAATGATTCCCCTGGCATGTGGATACTGGAGAGAATGTTCTCTCTGTAATACTGCCCGGCTCACACTACTCTACAACAGTTTCGAGATGGAAGGAGGCCTCATTTGGTTTACTGGGGTCTCACAGGACCGTTTGTCATGTAGCCTCCAGTACTGCGAGAACTGCAAGCCCATTGGTCTGTGATGCTGGTCTGAACAGGTTCATAGGGCAGTACTTCTGTTCCCACCATGATTCAACTCACAACAAAGCTACACTTTTCGACAGCACAGAAAACAATAACCAGTATCTCAAAGGACAACAAAAAAGGTTTGAAAAGAAATGGCCTGATCCTCCAAGTATCTCAAACAACTAGGAAGTAACAACAAATTCCAGGTGTCAGACTGAGAACGAAAAGCCAAGAAGATCAACACAAAGCAGAGGTTAGACCCACTGCTGATTTACCACATCTTCAACGACTCGAGTCGTCCTTGAGGAGCAAGGCACAGGGGCCTGTGGAAGGCTGCGGTCTGCAGCGACAGGCGTTGCACTCCAGAGCTTGGTGGGACTTCCACAGCAAACATAAAAGCTATTACACAACTTCTACAGTGGGTGCATCCAGCTCATCTTGTTCCCTTCCCCACTGAATGTTGATTAATGAGATACAGGCTCAACAGTGGTGCGAGCTGGAGGACTGATGATGATAATCAGTGTGGAAGCTCCTTACAACTTCTCCTATTTCTTTCTTAACCTTGTTAATCTGAATTTTTCTTACCAATTACTTTTTCACTTGCTTTAATAGTAGTTGAAGAAATCATTCAGCTCTCATGTTTAACTATAATGTTGTCCATCATTTTCAATATTGAATGAATAGTCGCATATCATTCAAAGACCTTGAAGAGGACTTTTACCACATTTAAGAAATAGCCAGTCTTCATGAAATCTCACAAAAAATGTATACCTGCATTTTTATATTCCGTTTATACAGAAAATAGATAATAGCAAGGTGGGCAGCAATAGAGAACATCGCTTTTTTCAATTTCCCGTGTGCATCAGTTTGTCACAAGTCCAAACTCATAACTGCGAGTTCAAAGGTGGAGCCTTTGAAATGTTTGCAAAGTTGTGAGCTAACAGTGGCTTCAACCTGGTATCTAGTACAAAGACAGTGGGGGAGAACTACCTGTTTTCCTGCCTGCAAAGAAGAGCTCTAGTTGTCAGGCAGTCACCTCAAAATGGGAAGGCTGGCATTCAGGAGTTGGCACTTTAAAAAATGGGCATGTTTAAGGACCAATGAATTTCCAGGAGTATTACTGGGCTCTAAGTGGGGTTGTATAGTGAGGCATTCGCTGATTGGTTGTTACCTTTTAAGCTACGCTGGGGCCTGAACACTCCTGGCTGAATTCTAGAAGGTTGGCACTGTCAATTATTCGCTAATTTCTGGAAGCTTGACTTTACTGGTGTGAGGCTGTTGCTGACTGGTTTTCACAGATTATCTGAAGTTCTCTCTAATAAATTGTGTTTTCTTGTTCAAGATTTTGGAATTTGGCTAAAGGAAGTCTTTGCCTTCCACTTATGAAAAATAAACACATTAATTCTCAGTCCCCTCTTTTGTTCTTCCTTAGCCAGACTCTCAGAAGAGACCATAAGGCATTGTTGAGAAGGTTGTTTGTGGAGACATGTTTATGAGCTAATGTTGCCCCTAAATTATTTACTTGGCAATTACAGTGAGAGAAAAATAGCTCTAACTGCTAACTTTTTGTAATGTTAAAAAAAAAAGGTGAAATCAGAATATTGAGGGTGTTCTGACAGTATCAATACAGGACACAGAACATGTGCTCTCTACACAGAACAGCCGGGAGTCTTATTTCCAGTGTGTGTCATGCGGCTGCTCTTGTACCCAAATCCTTTTCAGTGCTGACTGAACATTTATAGGTTAGGATGCTGAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGCTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCGCTGACTTGATGGACGTGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCGCAGAGAGTCAGACACGACTGAGCTACTGAACTGAACTGAACTGAAGTACACAACAGCACAGTTTCTTTATTCATTTTTACCTATCTGGCAACTCTTTTTAAATATTGTCTTTACCCTTCTCTCCAAACTGTTAATGCATCATGTTTTCAAATATGAAAATAATCACATTTTTAAACCGAACTCTGAGTGTGTCTAAGGTTTCAGCAAGCCTTGAGGTCTTGGCTTCATTTTCTGACTTCTCAGACTCAGTGACTCTTACTCACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATCAGTGACTCTTACTCAAACTTCATTGATTTCTTTTCACCCACTGTCACAAATAAATTTCTCTAGAACCATTTC EMBV3_23407 AGAGCACAGCGGCCTGGAGCAAAGAGAAGGATAAACAGAAGGGACACCCCCTCTAGGAGT Gene GeneID:617469|PMEPA1:NM_001078078:1321_cdna Constitutive 0 NULL GeneID:617469 13 GENE PMEPA1 TMEPAI prostate transmembrane protein, androgen induced 1 EMBV3_18524 TGGGCAAGGTTTGGCGCAGTCTGTGTTAGAAGGCATGGCAGCTGGTACATTCCTGTATGT Gene GeneID:508989|SLC39A2:XM_002690739:457_cdna Constitutive 0 NULL GeneID:508989 10 GENE SLC39A2 NULL solute carrier family 39 (zinc transporter), member 2 EMBV3_12204 GTGCTTACTGGAAGGACTTGAACAACTATCATAGATTCTCTGGCATGGGCTTCGGGCCTG Gene GeneID:514876|CALCA:NM_001143737:113_cdna Constitutive 0 NULL GeneID:514876 15 GENE CALCA CT calcitonin EMBV3_35395 TTATTTTATATATTAAGTGATGTTTTGATCAAGATTGTTATATTGTAATCATAGTTACCA Gene GeneID:280828|IL8:NM_173925:11_cdna Constitutive 0 NULL GeneID:280828 6 GENE IL8 IL-8 interleukin 8 EMBV3_07119 GGCCACAGATCTGACTTCAAGTTTTTCGATGGAAGAAATCCAGGCTACATTCTTCACCTC Gene GeneID:538772|DARS2:NM_001102222:172_cdna Constitutive 3 NULL GeneID:538772 16 GENE DARS2 MGC157196 aspartyl-tRNA synthetase 2, mitochondrial EMBV3_37820 ACAACCAGGGCCTTCCAGAGTATAGATCCTTAGCAGAACTTCACCTGCAGCGAGTGCTAC Gene GeneID:537878|PEX26:NM_001101172:88_cdna UTR3_Alt 2 NULL GeneID:537878 5 GENE PEX26 NULL peroxisomal biogenesis factor 26 EMBV3_08761 TCCTACTGGAGAAGGGAGCCCGGTGCCAAGGAGAGGCCCTGCCTCTGGCGCTGGCCCTGT Variant GeneID:534581|IL20RB:NM_001102175:54_cdna 693^843 3 EMBV3_11698 GeneID:534581 1 GENE IL20RB MGC140349 interleukin 20 receptor beta EMBV3_26377 AGGAAGGGACTTTAATCCAGAGTCGACCGACAGAGAAGAGGGCAGGGTAGTGACCCAAAA Gene BVT0102_149420 + 0 NULL GK000030.2:94610726-94701246 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040609 TCONS_00160887 TCONS_00160888 TCONS_00160886 TCONS_00249199 3 XLOC_024425 XLOC_097782 XLOC_152142 NonCoding TCONS_00160887 XLOC_097782 NonCoding NonCoding - 28:46291266-46294377 - TSS120219 521 0.142034548944338 2 0.833118971061093 1.08718240039192e-10 9.88440949105085e-05 4.59674262421187e-09 2.27636084964052e-06 0 0 0 3.84495968203802e-05 0 0 0 0 1.04132556672837e-05 0 0 0 0 0 2.75268145518163e-05 0 0 0 0 0 6.67958325047192e-05 0 0.000152957370007733 0.000278844719030242 0 0 XM_005200782.1 LOC101909003 PREDICTED: Bos taurus uncharacterized LOC101909003 (LOC101909003), 2e-18 96.9 92.42 0.124760076775432 0 noncoding GATTATGACATGATAACACATTTATAATGCAAAGCACCTGGAAGTAATCACCTGTTACAGAGCACAAGTTGCTCAGCTCACTGCAAGGAGGTCCAGGAATATCCGGGGTTGCTGAGGGCTGGTTCTGGGCCTGCCCCGGGGAGCAGTGAGGTCAGTGCCAGTCTCCCAGCCTCTGTCTGCTGGGAGATTTCTCCCCGAAACTGCTTGGAACTTTTCACTGAGTGACTTCATCCCTGCTGTCCGGGTCGTGTCTAACCTGGCCCCAACAAGATGGTTATTTTGGGTCACTACCCTGCCCTCTTCTTTGTCAGTGGACTCTGGATTAAAGTCCCTTCCTGATTCACCTTGCAGTGAGCTGAGCAACTTGTACTCCATAACAGCCGATTACTTCCAGGTGCTTTGCATTATAAATGTGTTATCATGTCATAATCTTGATAGAATGGATGAGTTGTTTTCTATGTAGTTTCCCTCCCCGCCCCCTTTCATTTAGTATCTCATTGTAATAAATATGTTACTGTTGG TCONS_00159871 r 3' 21758 TCONS_00159871 r 3' 22191 EMBV3_10088 ACTTATCCGAAAAGCTAGAGAGGCACCATTTGTCCCCATGGGAATGGCATGTTTTGCAGC Gene GeneID:100296447|LOC100296447:XM_002690140:5_cdna Constitutive 0 NULL GeneID:100296447 9 GENE LOC100296447 NULL similar to HIG1 domain family, member 1A EMBV3_04138 GAACATCAAAGGATCCATACAGGTAAGAAGCCACATGAATGTAAGCAGTGTGGAAAGGCC Gene GeneID:100138042|LOC100138042:XR_083923:320_cdna Constitutive 0 NULL GeneID:100138042 18 PSEUDO LOC100138042 NULL similar to zinc finger protein 420 EMBV3_04241 GAGGCATGATATATGAATCTGGAATGACAACAGCCAAGTCAAGAGGTCCCCCAAGGGCCA Gene BVT0102_072814 + 0 NULL GK000001.2:82278081-82285912 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001339 TCONS_00001337 TCONS_00001340 1 XLOC_000324 Coding TCONS_00001337 XLOC_000324 Coding Coding LIPH 1:82226158-82280356 j TSS675 3827 1 TCONS_00001337_3 457 0.0535667624771361 10 0.9295717475137 0 0 0 0 0 0 0 0 0 3.17955220557398e-12 4.25832150237965e-11 0 0 0 1.18774717709742e-12 0.00255797067173659 6.29792531409737e-12 1.98473535777057e-10 0 0 0 1.9973796511005e-08 0.000152663404124363 0.0014685718324373 0 0 0 1.75034691015241e-10 2.73287171218231e-11 1.42324855725969e-08 XM_589466.5 LIPH PREDICTED: Bos taurus lipase, member H (LIPH), transcript variant 0.0 2832 100.00 0.409981708910374 NM_139248.2 LIPH Homo sapiens lipase, member H (LIPH), mRNA. 0.0 2414 82.37 0.631565194669454 TCONS_00001337_3 sp|Q8WWY8|LIPH_HUMAN LIPH_HUMAN Lipase member H; 0.0 837 86.25 0.984682713347921 2 coding 0 0 0 0 0.0144709731275929 0.899876338681932 -0.00490402789503182 0.914412765516742 CCGCACATCGTCCGGGTTAGTTATCTAAGCTCTGAGTATAGAGGCTAAGACTCTGGGAAGAAAATCCTTTGTACGAATGTGACATACATGGGCTCCACTTTCCATATGCTGAGATTATACTTCCTCCTCAGTTTGATGTGCTTGGTGAGATCAGACACAGATGAAACATGTCCTTCATTTACCAAACTGAGTTTTCACAGTGCAGTGGTTGGAACAGGACTAAATGTGAAGCTGATGCTCTACACAAGGAGAAACCCAACCTGCGCACAAGCCATCAACTCCACAGTTTTGGGGAACTTGAACGTGACTAAGAAAACCACCTTTGTGGTCCATGGATTCAGGCCGACAGGCTCTGCTCCAGTATGGATAGAGGACTTAGTAGAGGGTTTGCTCTCTGTAGAAGACATGAATGTGGTTATCGTTGATTGGAATCGAGGAGCTACAACTGTAATGTACAACCATGCCTCTAGTAAGACCAGAAAAGTGGCAACAGTCTTGAAGGAATTTATCGACCTAATGTTGGCAGAAGGAGCTTCTCTGGATGACATTTACATAATTGGAGTAAGTCTAGGAGCCCACATAGCTGGGTTTGTTGGAAAGATGTACGATGGCCAGCTGGGGAGAATTACAGGTCTGGACCCTGCGGGCCCTTTATTCAACGGGAGACCTCCAGAGGATAGATTAGATCCCAGAGACGCACAATTCGTTGACGTCATCCATTCTGACACAGACGCACTGGGCTACAAGAAACAATTAGGAAACATAGACTTCTACCCAAATGGAGGATTGGATCAACCTGGTTGCCCCCAAACAATATTTGGAGGAATGCAGTACTTCAAGTGTGACCACCAGAGGTCCGTGTACCTGTACCTTTCTTCCTTGAGAGAGAACTGCACCATCACCGCGTATCCCTGTGACTCCTACCAGGATTATAGGAACGGCAAGTGTATCAACTGTGGCATATCACAGACGGAGCCCTGTCCCGTTCTGGGCTATTATGCTGATAACTGGAAAGACTATTTAAGGGAGGGGGATCCTCCTATGATTAAAGCATTCTTTGACACGGCTGAGGAGAAACCCTTCTGCATATATCATTACTTTGTGGATATTATAACCTGGAATAAGAATGTAAGAAGAGGATCCATTACAATCAAATTGAAAGACAAAGCTGGAAACACGACAGAATCCAAAATCAATCATGAACCTGCAACATTTCAGAAATACCACCAAGTGAGCCTGCTTGCAAGATTCAATCAAGATCTGGATAAAGTGGAAGCCATTTCCTTGGTGTTCTCTACAGGATCTGTAATCGGCCCGAGGTACAAGCTCAGGATTCTCCGAATGAAGTTAAGGTCACTTGGCCATCCAGAGAGGCCCCAGTTGTGTCGGTATGATCTTGTACTGATGGAAAATGTTGAAACAGTCTTCCAACCTATTCTGTGCCCAAAGCTGCAAATGTAATTGTTGTTAGGACACCTAAGTACCAGTAACGTCAAGAATGTTACAACTGCAGGCTTTTTAAAGCTTCACTTCATCTTTTCCTCAAGGCACAAAAAGTATGGAATAACCAGGGTTGTTGTTTTTTTTTCCCTTTTACAGTAATGTCCTATGGATGTCACACTGCAAAATGTCAAACAACCTTGGATTATGAAACAGTCCTGGGAAGGGAGTCTCTAAGTAGGGCAAATCAGAAATAGCTAGGTTCCCGACGGCCCAGCACCGTGCTAGGCTGTGTCCTGGGGCCTCCTTTGTTCCGACCTGTCGACTCTGCTGCTTGTCACTCGGGAAGTTCTGCCCATCACAGTGGCCATCCCAGCATCTTAAGGGAAGGACTGGCTGGAGGCCTCACTTTGGACTTGACTCCATGCTCCCCATGCCAGATCCTTCCAGGTTTTGCACAAAGAAGGGAATGGAAACAGACCTACCTCACAGGGCTCTTGTGTAGGCTTAGGAGGCAAGACTGTGAAGGGTTCTTTGAAATCCCCTGGGTGCCACTTCTGTCAGTGGCTTGATACATGTGAATATGCTTTTATTTATTTTGATATGGCTTATCTAATGTGCAACAAGAGAGCTTCTCCTTATCAACACCAGCTTCTCTCTTAGGCTATTTGCTTTAGGAAGGCAGAAAACCATACCCCTGGCTTCCTGCCTTGTTTAAAGTGGGTTAGTGCAGGAGGAGGTAGGGACAGACCAAGAGGGCAGCTGCTTGGACTAGACAGTAAGTGGATGAGGGAAGAAGAGCAGATGAAACAGAGGGGAAGCCCTGCTCAAAGGGACAAGGAATAGGGCAGGAGGCAGGAGAGAGGACGTGGAGCTTGTTTTTCACTTAAGGTGAAGAAGCATCACTTTACATGCAACCCTCATTTTAAGCAATACTTAAGAAAGGTTTTTGTTTTTCTTTTTTATCAATGTAATCTGTAATTACTGAAGGAAATTTAGAAATGCACAAATGCAAAATAAAAATATGCTATCATAGTCCCAGGGCTTCCCTGGTGGCTCAGTAAAAAAAGAATCTGCCTGCCAATGCAGGAGACGTGGGTTCAATCCCCGGGTCAGGAAGATCCTCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCCGGGAAATTCCATGGACAGAGGAGCCTGGCAGGCTACAGTCCATGGGGTCTCAAAAGAGTTGGACACGACTTAGCCACTAAACAACAACAATCATCCATCCATTGTCCCACCTGTTAGAGGTTATTTGTGTTATTCTTTTGGAGTGATGATAAACAACCTATTTGTTAACATATGAATTCAAAGCACTAACTTATTTGCTCTTGGAGCATCTGAATCTTCCAGTCTGAGGAATTCTCAGGTTTCTCTAGGAAGAGGCATGATATATGAATCTGGAATGACAACAGCCAAGTCAAGAGGTCCCCCAAGGGCCAAGGTCAGAGAGGTCAGAACCACAAGAGGGTGATCCTTGAGCAGATGTCCAGGATGGAGACAGGGCCAAAGGGTGGACAGCACCCCTCGCCCAGCTGTGGCCACTGCAGGAAGGTTCCTGAAAGTCACAGGTCCACTAGCCTCCTCCCCATCCAAGTGACTGCTCTTCTACTGCTTTCTGTGAGAATAGTCTTAAATGGAATCTCTGTTTCATAAATGATGGAACTCTGTAAATATACTGTGTGGCACGTCTTATCTTTATTTATACATACACAGCAAATCCAGAGTCTGTTCCACTGAAGTGTGGGATGCTTGCAGTGAATGTCTGAACTCTGGAAGGAGGAAAGCTCAGTGATGCTCCTGCCCACCTGGACGTTTTATCAGCCTCCCATGTTTCCAGCAGAGGTGGACTTAGAGATCTGGGTGCTCATAGGCTCTGATTTCTTTTTAGAGTTTAACTGGTCCTGTATTCTGATTAGCATAGTTACTTTTTTGCCCTCTTTGCTTTCCTTGGTAAGCGGGGGATCAAAACAGCAGAAAAATGCCAGGAACAGCATTTCCATCGATTTATAAGCTCCTCAGGCAGTGGGTTTCTTTGAGTTTCTTCTCCTGGCATCTCCTAGCATGGTACCCACCTCACTGTGGGGTGGGAGGATGCATGAGCAAATAAATAAATGAAAGAAGTTTGGTCCCTGGAGTGGAGGTGGATTTCAGTGAGTTTCATGTGATAGTGATCAGGTGAAATGAAGGCAGTGACAGGCGTGACCACTCTCAGAATCTTTCTTCCCAAGCCCCTGGAACTCTGTCTCCAGTTATCCTTGCCTCTCTTCCTTCTCTTTGTCAGTGTATTCATCTGAATCCCCAGAAAAGATGCAGTTAAACTGTAGCCTACCCTGTCCCCTCTTCTATTCAC EMBV3_04211 TGTCCCCATTCAACAATGAGAAAACAGACTCAGAAGGGAGGCGGTATGCTAGTGCAGAGC Gene BVV0102_104709 + 0 NULL GK000003.2:101274245-101320665 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170988 TCONS_00170986 1 XLOC_103695 Coding TCONS_00170986 XLOC_103695 Coding Coding TESK2 3:101181508-101320783 j TSS127624 3116 1 TCONS_00170986_3 335 0.0195763799743261 10 0.97769863721872 0.00122603515705036 0.00110987260243732 0.00145456502594455 0.000806107964819509 0.00072531343354804 0.000289966445321842 0.000711824445320347 0.000944972326790655 0.00111432909729059 0.000100716784972695 2.1814059029522e-47 0.000149178003300719 0.000355499865380443 0.000534852020110797 0.000184864658127498 0.0015722675081368 4.9880535298525e-18 7.40851589032676e-26 0.00110270909306289 0.000459760921473636 0.000442646163472614 0.000327374681994149 0.000104065438864184 3.04709539661538e-13 0.00139468350429295 0.000419123783213197 0.000352975017656496 3.25145651509432e-05 2.374362954783e-59 7.98046149216548e-05 XM_590674.7 TESK2 PREDICTED: Bos taurus testis-specific kinase 2 (TESK2), transcript 0.0 3000 100.00 0.533376123234917 NM_007170.2 TESK2 Homo sapiens testis-specific kinase 2 (TESK2), mRNA. 0.0 1840 84.12 0.528562259306804 TCONS_00170986_3 sp|Q96S53|TESK2_HUMAN TESK2_HUMAN Dual specificity testis-specific protein kinase 2; 0.0 655 97.00 0.991044776119403 2 coding 0 0 0 0 -0.0261386944186424 0.856769028742951 0.0356113764245272 0.544656866147587 CCACCGCCTCCGCAGGCTAAGAGCCGCTGCCGCCTCCGAGCAGTGAGGGTGTCGAGCCAGAAGAGAAGTAAAACTCAACAAAAACTTATTATGTATGGAATTCATTCTTAAAAGAAGAAAAAAGTGATTATTGAAGACTATGGATCGGAGCAAACGGAATTCAATTGCAGGATTTCCTCCACGTGTGGAGCGTCTTGAGGATTTTGAAGGAGGTGGTGGAGGGGATGGGAACATGACCCAAGTGGGAAGAATTTGGCCCTCCTCATATCGAGCTCTTATAAGTGCCTTTTCCAGACTGACACGTTTAGATGACTTCACCTGTGAAAAAATAGGGTCTGGCTTCTTCTCTGAAGTGTTCAAGGTGCGCCACCGAGCTTCCGGCCAGGTGATGGCTCTTAAGATGAACACGTTGAGCAGTAACCGGGCAAACATGCTGAAAGAAGTGCAGCTCATGAATAGACTCTCCCATCCCAACATCCTTAGGTTCATGGGTGTGTGTGTACATCAAGGACAGTTGCATGCACTCACAGAGTATATCAACTCTGGAAACCTGGAACAGTTGCTAGACAGTAACCTGCATTTGCCCTGGACTGTGAGGGTGAAACTGGCTTATGACATAGCAGTGGGCCTCAGCTACCTTCACTTCAAAGGCATTTTCCATCGGGACCTCACCTCTAAGAACTGCCTGATAAAGAGGGATGAAAATGGTTACTCTGCAGTGGTAGCTGACTTTGGCCTGGCTGAGAAGATCCCTGATATCAGCACAGGCGGTGAGAAGCTAGCTGTGGTGGGCTCACCCTTCTGGATGGCACCTGAGGTTCTCCGAGATGAGCCCTACAATGAAAAGGCGGACGTGTTCTCTTATGGTATCATCCTCTGTGAGATCATCGCCCGCATCCAGGCTGATCCAGACTATCTTCCCCGAACAGAGAATTTCGGGCTAGACTATGATGCTTTCCAGCACATGGTGGGAGACTGTCCCCCAGACTTTCTGCAGCTCACCTTCAACTGCTGTAATATGGACCCCAAACTACGCCCATCCTTTGTGGAGATTGGGAAGACCTTGGAGGAAATTCTGAGCCGCCTACAGGAGGAAGAGCTGGAGAGAGACAGGAAGCTGCAGCCCACAGCCAAGGGTAAGAGATGAAACTAGAATGTCCAGCCTGAACCCATGGGAGGATATTAGGATGGTGGGGGGCGAAGGGGCTTCCCCTCTAGGGCTGTGATCACAGGATCCCATGTACAGAAGAAAGGTAAAGAAGCAGGGGATGATGGGAAAAGTCCTGGAGCTCTGCACTAGCATACCGCCTCCCTTCTGAGTCTGTTTTCTCATTGTTGAATGGGGACAACAGTACCTACCTTTGCTTTCTCAAGTGGTAAAACATTGTGTATGAGATATTGCTTTTATTTGTTATGACTAGAGAGAAACCCTGACTTGACTCACTATTCTTCAGGACTCTTGGAGAAAGGACCTGGGGTGAAGCGACTGAGCTTACTGGATGACAAGATACCGCCCAAGTCCCCACGCCCAAGACGTACCATCTGGCTGTCTCGAAGCCAGTCAGACATTTTCTCCAATAAGCCCCCACGTACAGTGAACGTCTTGGATCCCTACTACCAGCCACAACGAGTTGGTGCTGCCCGAGCCCCCAAAATCAACCCTTTCAGTGCTCGCCAGGACCTCAAAGGTGGCAAGATCAAGTTCTTTGACCTGCCCAGCAAGTCTGTCATCTCCCTGGTATTTGACCTGGATGCACCAGGGCCTGGAACGATCCCCATGGCTGACTGGCAGGAGCCCCTGGGCCCACCTGCTCGCCGGTGGCGTTCTTTGCCTAGTTCACCTGAGTTCTTGCATCAGGAGGCTTGTCCATTTGTGGGCCGGGAAGAATCACTATCTGATGGGCCCCCACCACGCCTCAGCAGTCACAAGTACAGAGTAAGGGAGATCCCACCATTCCGAGCATCTGCCCAGCCAGCTGCTCCAGCCCATGAGGCCATGGACTGCTCCAACGCCCAGGAAGAAAATGGTTTTGGGCCCAGGCCCCAAGGGGTCAGTCCGTGCCTTGCAGGTGCCCCTGAGGAGATGGAAGTGGAAGAAGAAAGGCCAAGAGACTTGGCTCCAGTCCCCTTCTCTGTCTCAGGCATGGGCCTGAGGACCCAGGGAGAGCAGGATGGGTGAGCAGAGTTCATCCCCACCTCACCTTGGGGACAGACCTTCAGCTGAAGCCACAGGGCCCCCTTGGTGCAAAGCCTAGACTCTTTCCGGGGGCCCAGAGAGCACACAAGCTAAGCCAAGCCAGACTTATCTGTGAGGCGAGGCAGCCATGAGAGGCCTTCCTAGTTAGGGCCAATGGCTGATACGAAGCCTCTGAAATCCAGCAAGGAGCTCTGGCTCCCACCAGATCCCCAAGACTTCCCGACAGGACCAGAGGATTCCTAGTTCTAGTGTGAGCTGGCAGGCAGCTATTACCCCAGGTTCTTCTCCTACCCCAGGTCTGTTTCTTGCCCTTTCCTGGGGCATATAAGCTAATGGATGGAACCTGTAGCTGACCAGGAGATCATAAAGGGCATGGCTATTTCTCAGACCTGAAGACTGGGGTGCTTCTTGCCAGAATGTCTAAGACACTTGAATAATAATTGCTGTTTGCACTTACTGCACGGCCAGACGATGTCACTACATTTCTATGCAAGACAAGGCAGAGTGGTGGTCGTGGCTCTCAGCTAACCTATTCAAAGATCTTTTCCAGTTGATTAATCTATTTTCATATTTATGAAGGAGTCTTAATGTTCTGCCCTAAAAGACTTTCAACCTTGTGGTTGGGAGTGGGGCTGATTTTGTAGGCCCTAGGGCCTGCTCTGTGAATTTGTCGACACATGATACACCCAACTGGTTTATACATGGACTGATTTCTTCCCTTTCTGCTATGGCCAGAGCTATGGGAACAGTCTGTCCTAATAGAACCACAATAAGAAATAACCAAAGATGAAGCTGGTCAGATATTTTCATATCTTGTTTCTGGTTTTCTTCTTTTTTTTTTTTTGGTAAAACTTTCCCAGGACACTTTGAGATTTAAAAATGAATAAAGTCGGTGTTACAGGTGCTGGTCAGCCTTCTT EMBV3_14418 CTGATAGCACCCATGTATCTGTGTGTTCCCTCAGGAAGCCCCGGGGTGATGCCAAGAAGT Gene GeneID:511523|LOC511523:XM_002692244:1515_cdna Constitutive 0 NULL GeneID:511523 13 GENE LOC511523 NULL similar to SLC2A4 regulator EMBV3_33127 TAGCTAGAGAACTTTCTGGAACCATTAAAGAGATCCTGGGGACCGCCCAGTCTGTGGGCT Gene GeneID:784762|LOC784762:XM_002690994:289_cdna Constitutive 0 NULL GeneID:784762 10 GENE LOC784762 NULL similar to 60S ribosomal protein L12 EMBV3_17338 AACTGTACCTCCATCATCAGAACAACGTGGAAACCCTCACGAAACAGGAACGAGCCCAGC Gene GeneID:510512|ZNF438:NM_001143772:25_cdna Constitutive 0 NULL GeneID:510512 13 GENE ZNF438 NULL zinc finger protein 438 EMBV3_32637 CAGGGCTTCCTGAACCTCTGGGAGAGACTTTCAGAAAAGCAGAAAGGAGCACAAAAGTGA Gene BVV0101_056730 + 0 NULL GK000030.2:81571040-81602662 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16861 TTTTGTCCTGGCCTCTCTGGGGTTGTGGGGTCATTTTCCCTCACCTCTGCTCAATGCATA Gene GeneID:618198|SDC3:XM_002685665:432_cdna Constitutive 0 NULL GeneID:618198 2 GENE SDC3 NULL syndecan 3 EMBV3_20715 CCCTCCTTTTTCCCAGATATCTAGGTTAACAGTGCCCTGTTGTAGAAACCAAGGGCAGTG Gene BVT0102_366248 + 1 EMBV3_11346 GK000015.2:80441532-80450758 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011730 1 XLOC_007281 Coding TCONS_00011730 XLOC_007281 Coding Coding - 1:146559945-146560829 - TSS8807 884 1 TCONS_00011730_1 103 0.755656108597285 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.98773428960226e-05 0 0.000413924085596897 0 0 0 4.19720578428534e-06 0 5.1463652518654e-06 0 0 0 0 0 0 TCONS_00011730_1 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 1e-09 56.2 31.25 0.893203883495146 1 noncoding 0 0 0 0 -0.032858519476591 0.821587361689646 -0.000235854077989499 0.996789701077009 GCCAGGGCAGAGCCTGGTCTGTAAATTCAGGGAAGCATGGGAGGTCAGGTGAGGTTGAGCCCTGGGGAGGTAGGAAGGAGAAACGGACACCCAGCAAAGGCCCAAGCTCAGAGAGCTGCACTTTGACAGCAGGAACTGCAGCAAAGCAAGGGAGGGGGAGACAGCCCCAGGTCCACCCTCCTCGGTCTGAGTGAGCAATTTTTCCTTTCTGTTGTGCTGCAGACCCCCCTGTAGAATAGACAGGGCAAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTAGAAAAAACGGTTTCTAAAAAGACTGACAAAAAAGGCCTAATCTTTTGATAGCTAAAAGCAAAATCTTTTACTATACTTAATTTTCTGACATGGGTAACACTGAATCAAATGAAAGACAGCTCTTTATAGGAGTAATTTTACAGTTATTAAGTAAAAGAGGAATCAAAGTTAAAAAATCTACCATTCAATCATTTTTTACATTTGTACAAGACCACTGCCCTTGGTTTCTACAACAGGGCACTGTTAACCTAGATATCTGGGAAAAAGTAGGGAAACAGCTAAGAGCTTATTGTGTTCAGCACGGCTTGGAGAAAATCCCTACTTACACCCTTCCTCTGTGGAATATGATTAGAGATGCTTTAGATCCAGCTCATGAATTTAAAAAGGTACCTACCTGTTAAAGAGAAAAGTAAAGTTGGAAAAGTACCTGTTAAACAAAAAAGCGAATCTACCTGTTATAAAGAAAAGTGAAAATGAAGAGGCTATACCTAGCTATTGGCAGCTAAACGAATGGCTAGCCACTATGACTGCCAATGAACATGTAAAAGATAGGGATGAAAGGAAAGATCAGACCTCCCCTCAAGATGAGAAAGATTTAGAG TCONS_00005584 . 5' 1075 TCONS_00005584 . 5' 1075 EMBV3_30528 ACAGTGCAAAGCCCTCCCTGCAGTCAAATCTCCTCAGGTCGTAAGCGCCTTAACTCTGTT Gene BVV0102_116269 + 0 NULL GK000022.2:1069281-1114692 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26805 GCTCATATCAAGAGATTGAGGATGACAGTGATGTAGAGTGGAAGTTTGCTCGCTCGAAAC Gene GeneID:286866|TRPC3:NM_001104960:2_cdna Constitutive 0 NULL GeneID:286866 17 GENE TRPC3 TRP3 transient receptor potential cation channel, subfamily C, member 3 EMBV3_10370 CAGAACCCAGACTTGTTCCTCTGGGCCTGATGTCTGTTCCTAGACCTCGAAATCTTCCAG Gene BVV0102_175031 + 0 NULL GK000029.2:25208594-25685127 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24915 CATCCAGCACAGCCCCTAGACGTTCTCTTTGTTGATTAGTCGCTGGGTCTCGTGTCAGAT Gene BVT0102_136580 + 0 NULL GK000014.2:33480414-33559383 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051704 TCONS_00051706 1 XLOC_031263 NonCoding TCONS_00051704 XLOC_031263 NonCoding NonCoding - 14:33511827-33536771 - TSS38502 703 1 TCONS_00051704_1 49 0.0938833570412518 3 0.971936014112176 0.00696939353033132 0.00151696064594821 0.00566214854218614 0.0024715356627119 0.001653367634233 3.06986193025016e-05 0.000928963997954429 0.00249199913410025 0.00504162820663146 8.32176655659328e-60 1.51944948568211e-79 3.40871635037361e-27 7.51460424237025e-05 0.000501411541299952 1.2798479089786e-35 0 2.41591284091433e-117 0 0.00476117800174738 0.00448857482726738 0.00021909994031276 0 0 0 0.00125581660713863 0.00284695190348529 0.0033497994300716 0 0 1.08138752289026e-119 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 1e-11 75.2 84.72 0.10099573257468 0 noncoding 0 0 0 0 -0.304366080026278 0.0453667644057745 -0.0581845097194026 0.291102182556408 CTGCAACCTAAACCAGAACTGGGGTAATAACTGTTGATCCTTGACAAGCATCTTGCTCTACAAACTCGGCCAGAACGCTCTCCAGGAGGACTCAGCCTCTGACTGCAAAGAAGGAGGAAGGCTTTTTGTCTTCTGTGATGGTCCTACAAGGCCTCTCCTCTGACCTAGGGGAGGTGATGGTCTTGGGAACCTGACAGAGATAGATTCTACCATCCAGTGAGCAAGAACAGCTTTGGAGTCTTCATGGAAGGAGCCACAGATACCATGGAGTACACGGGCAACCGCTGTAGGCCTAGAAGCCTAGTGATGGGAGCTGACCTAAAGGCGATGGTGCAGTACCTCACGGAGCCCACGGGGACGCTGGAGGAGCTCCCCATCCAGCACAGCCCCTAGACGTTCTCTTTGTTGATTAGTCGCTGGGTCTCGTGTCAGATTCTTTTGTGACCCCCTGGACTGTAGCCCGCCAAGCTCCTCCGGTTGCCATTCCTCCCCCGCCCCCCTTCCCGGGTTCCCTGACCCAAGTGCTTCTTGCCTTGGGAACCTGTCTCAGGAGGCCATTAGGGAACCCTGGCCTATTTCTGTTCCTTTCAGACCAGAAAAATATCCAGCACCCATCCTGCCTCTTGAGAGTGAGGCCTGAGATCCTAACTTTAGATCTTTTCAGAGAATTTCAGAGGAGAGAAATAAAAACACATTAAAAGTC TCONS_00053182 r 5' 2466 TCONS_00053182 r 5' 2466 EMBV3_16351 TTTCTAGATGTCTGCTGCCTCTGCTTTGGTGATAGCTCTTTAATGTAAGAAGCAGCCTGC Gene GeneID:508554|MRS2:NM_001101903:62_cdna UTR3_Alt 2 NULL GeneID:508554 23 GENE MRS2 MGC166254 MRS2 magnesium homeostasis factor homolog (S. cerevisiae) EMBV3_04618 AGACGGCCTCCAGATGCGACCGAGTGCCGGGCACAAACTCTTACAGTATGGAGGCAAGCT Variant GeneID:527467|GFM2:NM_001102109:127_cdna 167^707 1 EMBV3_20811 GeneID:527467 20 GENE GFM2 MGC140264 G elongation factor, mitochondrial 2 EMBV3_38796 ATAAACTAGAACCTCAGTCAAGGCGGAGACTCGGGTAGATGCTAGGACAAACATGGCAGC Gene BVT0102_232288 + 1 EMBV3_19878 GK000014.2:34321882-34396598 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35066 TTAATTGGCAGGAGCTCATCAAACGCCTCCAAACCGACACTGAAACCAAGCACCACACAC Gene BVT0101_002879 + 1 EMBV3_01778 GK000028.2:18572814-19004886 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00253025 TCONS_00152753 TCONS_00063037 TCONS_00222010 TCONS_00007432 TCONS_00251705 TCONS_00177841 TCONS_00232348 TCONS_00186108 TCONS_00248863 TCONS_00109859 TCONS_00023615 TCONS_00252354 TCONS_00010052 TCONS_00251930 TCONS_00218899 TCONS_00175545 TCONS_00011804 TCONS_00040583 TCONS_00073576 TCONS_00021596 TCONS_00040195 TCONS_00123618 TCONS_00234064 TCONS_00207068 TCONS_00177280 TCONS_00020651 TCONS_00072815 TCONS_00206861 TCONS_00040147 TCONS_00148279 TCONS_00062743 TCONS_00231613 TCONS_00078479 TCONS_00245928 TCONS_00153219 TCONS_00252056 TCONS_00124845 TCONS_00176254 TCONS_00056728 TCONS_00047865 TCONS_00157440 TCONS_00006827 TCONS_00022065 TCONS_00006026 TCONS_00142489 TCONS_00136896 TCONS_00219970 TCONS_00197184 TCONS_00238326 TCONS_00038667 TCONS_00249012 TCONS_00019198 TCONS_00071185 TCONS_00031911 TCONS_00066285 TCONS_00156732 TCONS_00040178 TCONS_00040745 TCONS_00201770 TCONS_00222115 TCONS_00244653 TCONS_00056147 TCONS_00221977 TCONS_00239418 TCONS_00190322 TCONS_00116101 TCONS_00250938 TCONS_00251546 TCONS_00123170 TCONS_00010780 TCONS_00176255 TCONS_00249570 TCONS_00040698 TCONS_00209529 75 XLOC_131641 XLOC_155966 XLOC_092518 XLOC_037764 XLOC_135319 XLOC_002993 XLOC_154646 XLOC_107614 XLOC_141833 XLOC_112161 XLOC_151806 XLOC_065763 XLOC_014282 XLOC_155295 XLOC_005604 XLOC_154871 XLOC_132218 XLOC_105326 XLOC_007354 XLOC_024399 XLOC_045340 XLOC_012269 XLOC_024012 XLOC_075170 XLOC_143543 XLOC_125587 XLOC_107054 XLOC_011326 XLOC_044583 XLOC_125381 XLOC_023964 XLOC_090161 XLOC_037470 XLOC_141101 XLOC_047367 XLOC_150855 XLOC_092984 XLOC_154997 XLOC_076388 XLOC_106033 XLOC_034531 XLOC_027997 XLOC_095895 XLOC_002389 XLOC_012736 XLOC_001589 XLOC_086914 XLOC_083107 XLOC_133287 XLOC_118846 XLOC_144993 XLOC_022490 XLOC_151955 XLOC_009878 XLOC_042957 XLOC_018156 XLOC_040999 XLOC_095192 XLOC_023995 XLOC_024559 XLOC_123415 XLOC_135424 XLOC_150512 XLOC_033950 XLOC_135286 XLOC_146084 XLOC_116357 XLOC_070270 XLOC_153881 XLOC_154487 XLOC_074724 XLOC_006331 XLOC_152513 XLOC_024514 XLOC_128040 Coding TCONS_00251705 XLOC_154646 NonCoding NonCoding - X:69426447-69426965 - TSS188926 518 1 TCONS_00251705_1 65 0.998069498069498 1 0 7.09796182982944e-05 8.25130051264552e-05 8.36387637595908e-05 6.12483022995686e-05 4.85412696465069e-05 2.9145615925694e-05 6.69054052826153e-05 0.000135565964623714 7.63572753659092e-05 0.000199472884297573 0.000288436218688991 0.000126478971862607 3.58154756486511e-05 0.000167873968938793 6.06447753711831e-05 0.00422691868074486 0.00135280383723707 0.00369220715623738 6.94866064937201e-05 0.000100603125611537 3.7212167832166e-05 0.00131422003808896 0.00236628688467835 0.00191902574808165 7.05510863807836e-05 0.000171203243300918 0.000106584388318346 0.00043618489023452 0.000336938112620144 0.000591491882455087 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 3e-42 176 69.22 0.938223938223938 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 0.0334088256294549 0.634235315248572 ATCTCTTCCTCTTTTGTTTGGTTTGGTGGGCATTTATCCTGTTCCTTTATCTGCTGAGTATTCCTCTGTCTCTTCATCTTGTTTAAATTGCTGAGTTTGGGGTGTCCTTTATGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCATTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCGGTGTTCTGGTATGTGGAGCTATATTTCTTCTCTCTGGAGTGCAATGAAATGTCAGTAATGGGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTATTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATGAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTC TCONS_00244679 . 5' 70432 TCONS_00244679 . 5' 70432 EMBV3_05369 GCAATTTGAATGAACTGGTTAAGCATGGTCTGCGTGCCTTACGGGAAACCCTTCCTGCAG Gene GeneID:515503|PSMA1:NM_001035310:116_cdna Constitutive 0 NULL GeneID:515503 15 GENE PSMA1 MGC127224 proteasome (prosome, macropain) subunit, alpha type, 1 EMBV3_08243 GTGAAAAGGGCTCTCACCCTAAAAAACCAGTCCCGTGAAGACCAGAGCAGCAGAGGTGAT Gene GeneID:508965|C7H19orf25:NM_001075380:44_cdna Constitutive 1 NULL GeneID:508965 7 GENE C7H19orf25 C19orf25 MGC139028 chromosome 19 open reading frame 25 ortholog EMBV3_23449 TTCTGCCAACTACCAGGGCCAACCAACTACCAGGACAGCACTTAAGAGAGAAACCCGACA Gene BVT0102_092621 + 0 NULL GK000025.2:1301381-1304434 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33644 ATCCTGCCCGGTGGTTTGGAGAAAGCCTCATCTGGCCCCTCCTTCTCGGGGCCTCAGTTT Gene BVV0101_020328 + 0 NULL GK000017.2:73208630-73215380 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078263 1 XLOC_047263 NonCoding TCONS_00078263 XLOC_047263 NonCoding NonCoding - 17:73210261-73211887 - TSS58271 541 1 TCONS_00078263_1 68 0.390018484288355 2 0.668307692307692 0 0 8.55268198176826e-05 0 0 0 0 0 0 0.000304213818442601 4.23141068774352e-06 0 0 6.95600146857061e-05 0 0.000195279678955374 0 0.00199428629974597 0 0 0 0.000617246645223701 0.000220449319823226 0 0 0 0 0 8.97337743471737e-06 0 XR_228374.1 LOC101909384 PREDICTED: Bos taurus uncharacterized LOC101909384 (LOC101909384), 0.0 836 100.00 0.853974121996303 0 noncoding 0 0 0 0 0.0545082229049016 0.699943435446723 0.0276621804181764 0.565542394223095 TGGCCAGGAGGGTGCCGCTGCTCCGGGCCTCAGCGTCCCCAATGCGATGGGCCGTCTGAGAGGAGTCGGGTTTCCCTGCTCGCCCCCGCCTCCTGACAGGCCAACTTGGGAAGGTGCATCCCGAGCAGGGACATTCAGCTGTGTCCCGGGGGACACTGGCCACGGGGAGGCGGCTGGCCAGGACGTCAGCTTGGCAGAATCCGCCAGTTCACAGAGGGGGAAACTGAGGCCCCGAGAAGGAGGGGCCAGATGAGGCTTTCTCCAAACCACCGGGCAGGATGAGGGGTCAGGAGGCCTTCTTGGCAGGGATCGAACCCATGCCCCCAGCACTGGAAGCATGGACTGTTAACCACCGGACCACCAGGGAAGCCTGCCATCTGTTTCTTCAGAGTGATTCAGTTTTTTAAAAATGGAAATGCCTATTTCAGCCTCATCTTAGCAATATTGGTCAAGAAATCATGGATTTGATGAACTGATGATACATTTTTTTTCTTTCTGATACACATGAAAATGCATAAAGTAAAAATGTTTAACTACCTTA TCONS_00078262 s 5' 1633 TCONS_00078262 s 5' 1867 EMBV3_05289 AAAGCTATTCATATTGACAACACAGGGCCTCCCCTAAGCCGCTCCACCACGGACACCTAT Gene BVT0102_141788 + 0 NULL GK000013.2:78412500-78464283 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046433 TCONS_00046434 TCONS_00046441 TCONS_00046438 TCONS_00046439 TCONS_00046440 TCONS_00046442 TCONS_00046437 TCONS_00046443 TCONS_00046444 TCONS_00046431 TCONS_00046435 TCONS_00046436 TCONS_00046432 1 XLOC_026712 Coding TCONS_00046433 XLOC_026712 Coding Coding B4GALT5 13:78461384-78484753 = TSS33686 4101 1 TCONS_00046433_2 352 9 0.824888736733995 0.00347079034670977 0.00784382514664207 0.00612738379157783 0.000217240047576403 2.33577620098803e-08 0.00244023638762736 0.00345259275003788 0.000705483981932998 0.000154506449091756 0.000709912884135992 2.98004635575288e-09 1.15595946083036e-07 0.000623348539148962 0.00298246030002941 1.23520104739215e-09 0.024511446474756 0.00980719766645279 0.0113750192302891 0.00531757230243287 0.00352947936277053 0.00308788228293152 0.00539996125183487 0.00367466861688119 0.00856900678976345 1.88290079856189e-05 0.00649930671169261 6.84325059464104e-08 0.0016844267907951 0.000611932802479388 0.00193572974527809 XM_002692354.2 B4GALT5 PREDICTED: Bos taurus UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 (B4GALT5), mRNA. 0.0 7380 100.00 0.997561570348695 NM_004776.3 B4GALT5 Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 (B4GALT5), mRNA. 0.0 1472 86.71 0.298951475249939 TCONS_00046433_2 sp|O43286|B4GT5_HUMAN B4GT5_HUMAN Beta-1,4-galactosyltransferase 5; 0.0 718 96.00 0.991477272727273 3 coding 1 1 1 1 -0.485197290807489 0.0856722671111427 0.0377280130011571 0.664719214375395 ATGGATATGAACACCTACCTCTTCATGATGCAGGCCCAAGGCATCCTCATCCGGGACAACATGCGGACCATTGGCGCGCAGGTGTACGAGCAGGTGGTCCGGAGCGCCTACGCCAAGAGGAACAGCAGTGTGAATGACTCAGATTATCCTCTCGACTTGAACCACAGCGAATCCTTCCTACAGACCACGACTTTTCTTCCTGAAGACTTCACCTACTTTGCAAACCATACCTGTCCCGAAAGGCTCCCTTCCATGAAGGGCCCGATAGACATAAACATGAGTGAGATTGGAATGGATGCCATCCATGAACTCTTCTCTAAAGACCCAACCATCAAGCTTGGCGGTCACTGGAAGCCATCAGATTGTGTGCCTCGGTGGAAGGTGGCCATCCTCGTCCCCTTCCGGAACCGCCACGAGCACCTCCCGGTCCTGCTCCGACACCTCATTCCCATGCTCCAGCGCCAGCGCCTGCGGTTTGCGTTTTATGTGGTGGAGCAAGTTGGCACCCAACCCTTTAATCGAGCCATGCTTTTTAATGTGGGTTTTCAAGAAGCAATGAAGGACTTGGACTGGGACTGCCTAATTTTTCACGACGTGGATCACATACCAGAAAGTGATCGTAACTATTACGGATGTGGACAGATGCCAAGGCATTTTGCGACTAAACTGGATAAGTATATGTATCTGCTTCCTTATACTGAGTTCTTTGGCGGAGTGAGCGGCTTAACAGTGGAACAGTTTCGGAAGATCAACGGCTTTCCTAACGCGTTCTGGGGGTGGGGTGGAGAAGATGACGACCTGTGGAACAGAGTCCAGAATGCAGGCTATTCTGTGAGTCGGCCAGAAGGTGACACAGGGAAGTACAAGTCCATTCCTCATCACCATCGAGGAGAGGTCCAGTTTCTTGGAAGGTACGCTCTGCTGAGGAAGTCCAAGGAGCGGCAAGCGGTGGACGGCCTCAACAACTTGAACTACTTCGCGAACGTCACGTACGACGCCTTGTATAAAAACATTACCGTCAACTTGACACCCGAGCTGGCTCAGGTGACTGAGTACTGAGAGGAGGAGGGAACAGTCGTTGGCTTCCCCCACCGCCCCCGGGACAGCAGCCCGCCGACGCGTCTCGGGGGGCGCGCCGCAGAGGAAGAGAACAGGAAACCCAGCGCCTCCTGAAGGATCACAGGGTTCAAGGAAAAAAAAAATGTGAACAGAGCACACGCACAAAAACGCCTTCCCCGTCCGGACCCGCCGGGGTGGAGGGAGGCGCCCGGGAACTGACCGACGCCTGTCCTGCTGCCCTCCTCCCCGGCCTCCCGCCCCGTCTCAGCCACGGGCCTCCGCAAGCGGAACCGGAGCCGCCCCGGAGCCTCTTCCCCCGCGAGAACGGCCTGGGCAGCTTCTTGGCCTCCAGAGCAGAGAGGCAGACCCGCGCAGGGCAGCTGTGTTTTAGGAAGAGCAAAAGGAAACTCCACACAACTATCCTTCTACATATCTGGTGTTCTCTCTCTCTCTTTTTTCTAAATTACCTGCTTTGGGTGGGGATTGAGGGTGGAGGGGGAGGGCTTGGGGAAGAGAAATAGACATGCAACAATCACTTCTTGAAGAAGTATAATTGTAAATAAGCCATGTAAAATGCCTTTTTTTTTTTTTTTTTTTAAATTTTCTAGCCGGCTCCAACTCAAACCGAGGGTTTATATATCAGATCCTGTATTGGTTTGGCAGATGCAGGAACTCGGCTAAAAGGGAACGACAGCCATCTCCCCGGTTGCTGTCACTGTGGAAGGGAGTGGACATAGAGCATGTCACAGCAGAACAAAACAGCCCAGTCATTATCACCAGTGGCCAGCTTCTTCTGCCTCACCTCGCGTCCCCTTTTCCGAAAGCGTTGCTCTTGACTTTGGCTTTGGTTTTCTCTTCCCTGTTGGGCAGTCCTTCCCGGTCCCAGCCTTGTGCTGAACAGGAAGCTGTGTTAGGATAGTGCTGTCCTGCTTGAAGCAAACCCTTCAGGTGGGCCCAGTGCACACCACTGGGTCTCTCACCTTGGTGTCTCATCCTTTCCTCGGCATCAGGAGAGAGTGGGGGTGTTGGTTTTTCCTACTTTCTGTTTCTCTCTCTCTCTTTCGCTTGCTCTTGTGGACCGTGGCCACAGTTTTTGAAATCTGTGCCTAAATTACCAACCAGCTTCAATGATTCCTCTGAATATTCCCCTTTTTGGTTTCTGGAAAGGTTTTTTTTTTTTTTTGGTTAACATTATTAACTAGTGTTGGGTTGGCCAAAAAGCTTGCTTGGGTCATTCTGTACCATCGTACGGGAAAGCCCAAATGAACTTCTTGGCCAGCCCAATATATAGAATCATGAGCAACTGAATGATGTGGAACTTAGCCAGGGAGCAGGTGACACTTGTGTGCTGCGGGTCAACTGGGATCCAGGCTAGACCAAATCAGAGCTTTGGGATTAGCTTAACAAAGCTGCCGGACAGACAGACACAGGAGCCCACATGCTCCTTTCACACCCCCATGTGCTTTTTTGAAGTCAGATTCTAAATTGCATTTGAATTTGTGCCTCTCTGTTTCCCTTGAGCCAAATCCCTCACCTCATAGTTCCCTTTGGCTCCTGCAGAATTCTGAGGAATACCAGGTTTCCCCCATCCTTTTCCATAAAACATATTTATGTATCCATACTAAAGAGTACTTTCTGAGGAGTACTTCATAGTTTTTTTTTTTAATTGCCTTGTTTGCCTTCAGTTTCCTTAATTTTCATGGTTTACATGGATGTGTGTGTAGGGGCTATATTTGTGTATATACACGTGGGTTGGGGTTTTTGCATGTGTGGGTTCCATGGACGTATGATCCCCACAAGCTGTGGGAGTGATTGGCCAGGCCTTGTTTTTTTAATGTGTGTTTTTGTTTTTTCGAAGAAGAGGATGCTATTTAGAAAAGAAACCGCATTGCAAACCTCTTACCAGCTCATATGAGAGAGCAGATTCCTGCCCTTGAGCACGCTGGTAAGTTGTTATCATAAATGTTTTAAAAGAGTTTTGAGCATTTCATGCTTTAAAAGACCTTCACAGGGAATATGACACACAAAGTTCTTTTGGTTTTCCTTTGACGTAAGGTGCATAAAGCAATAAAAATTTCTTTCCCCCTTCCTCCATGCGCCCCCAGGCCTCGTGCTGGCCTGGCCTCTTCTTTCTCTGAGAGCTGTGAGCTGCTTTCAGTGTGACAAAATTACTATGTCCTTTGGAAGAATTTGCCAGGGCAGACTGATCATTGGTCAGGGATGGCCCGTGTTTGAAGCCTTTCATTAGCATATTTGCCGTAAGAACAAATGCTGGCAGAAAGCTAACAACACCTAATTTGACAAAGAAAATGCTGGCTTGAGGACAAAAGGAAAAAGTCTTTCCAGGGCTGGAAGTTGGGTAACTTAAATCATCTTGCAATCATGTGTGAGTTTGTTTTATCTGTGTGAAGTCTCTTACTGTGCACTGTTAAATCATTTATCCACTAAACTGAGTGGGGAAACGTAAAAGAAAAAATGAAAAACCACAGCCAGCCCCACGTGCTGTTGATAGCGTGTTGATAGCGTGAAATTATCATGTTAAACAACAAGAACCAAGTGTGACCTTGCGCGTATTTTGGCAGCTGAAATTCCTTAAGGCTACCAAACGGATGACCCCTTAAATCAGCCTTGCCTTTCGATTGCAGTGTGCAAGGAAAAGTCTTCTTTCACACTGATTTTTTTGGCGGGGAGGGAGTGTCCACAAAGCTATTCATATTGACAACACAGGGCCTCCCCTAAGCCGCTCCACCACGGACACCTATAGCTGAACGACAGCCACGTGGACTGATGGTATCCACTCACCAATGACGATGACATTGAACTAGCTTGTTTCCATCACTACGATTTTTTGAGCTTGCTCTTATGTTTTAAGAGGTGCCAGGGGTACATTTTTGCACTGAAATCTAAAGATGTTTTAAAAAACACTTTTCACAAGAATATAGTCCTTTGTCATTACATTATTTACTCATGTGTTTGTACATTTTTGTATGTTAATTTATGAATGATTTTTTCAGTAAAAAATACATATTCAAGAACCAAACC EMBV3_12319 CAGAAACAAGAACTGTCCTAAAAGACAAGTTAAATCTGGGTAAAAGCTCTTACCTAACTG Gene BVT0102_198623 + 0 NULL GK000030.2:90535335-90556456 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244931 TCONS_00244934 TCONS_00244933 1 XLOC_150590 Coding TCONS_00244933 XLOC_150590 Coding Coding RP2 X:90490141-90537780 j TSS183977 3845 1 TCONS_00244933_4 350 0.0319895968790637 5 0.919392081951383 0.000798037127458375 0.00126159408507071 0.000819100786693341 0.000528258058668364 0.000207061874613815 0.000135723091718772 0.000219502720477037 0.00035097966262796 0.0008363186593022 9.13608357967834e-05 1.65631674378043e-06 7.30859088169819e-10 2.98312210288623e-05 1.14654010789684e-08 0.00023570544662189 0.000766755616165778 6.94380520176836e-11 0.000663217983255632 0.000849176223558865 0.00085857533387454 0.000125985208633454 0.00032542024726998 5.5974976588299e-09 3.57183769106414e-08 0.000884250615473829 0.0006082283344398 0.000398905347114515 2.07409834895898e-12 0.000105597399648242 2.84050105528463e-10 XM_005228079.1 RP2 PREDICTED: Bos taurus retinitis pigmentosa 2 (X-linked recessive) (RP2), transcript variant X1, mRNA. 0.0 6888 100.00 0.99297789336801 NM_006915.2 RP2 Homo sapiens retinitis pigmentosa 2 (X-linked recessive) (RP2), 0.0 2554 82.80 0.622886866059818 TCONS_00244933_4 sp|O75695|XRP2_HUMAN XRP2_HUMAN Protein XRP2; 0.0 678 92.86 0.997142857142857 1 coding 0 0 0 0 0.872435163973929 0.0341639166355323 -0.0199155930276566 0.690988266959867 ATTGGCTGCGGTGGGTCGTCAGGACAACTGAGAGGAAAAAGAACAGGGGTGTTGGGCCTGGCGGGCAAACCTGGGCTGCGGGCTACTGGGTGGTTCCGCGGGGCAGTGTTCAGACCGCTGCGGGGCCCAGGCGCCCGGGGTTCACATTGCAACTCCAGGAGGTGCCTGAGCCAGCAGGCCGGCGAGGAGTAGCGGCCAGTGAGACCCGGCGGGCCAAGACCATGGGCTGCTTCTTCTCCAAGAGGCGGAAGGCTGAGAAGGAGTCGCAGCCGGAGGACGAGGAAGTGCAGCCGAAGCAGTACAGCTGGGACCAGCGCGAGAAGGTTGATCTGAAAGACTACATGTTCAGTGGACTGAAGGATGTAACAGTAGGTCGCTTACCTGGGAAAGTGGCAGGACAACAATTTCTCATTCAAGACTGTGAGAACTGTAACATCTATATTTTTGATCATTCTGCTACCGTTACTATTGATGACTGTACTAATTGTGTCATTTTTCTGGGACCCGTGAAAGGCAGCGTGTTTTTCCGGAATTGCAGAGATTGTAAGTGCGCATTAGCCTGCCAACAGTTTCGTGTGCGGGACTGTAGAAAGCTGGAAGTCTTCTTGTGCTGCGCCACTCAGCCCATTATTGAGTCTTCCACGAATATCAAGTTTAGCTGTTTTCAATGGTATTACCCTGAATTAGCTTTCCAGTTCAAAGATGCTGGGCTCAGTATCTTCAATAATACCTGGAGTAGCATTCATGACTTTACACCTGTGTCAGGAGAACACAACTGGAGCCTTCTTCCAGAAGATGCTGTCGTTCAGGACCATGTTCCTCTACCTACTACCGAAGAGCTCAAAGCTGTCCGCGTTTCCACAGAAGCGAGTAGAAGTATCGTTCCAGTGTCCCGGGGTCAGAGACAGAAGAGCAGTGATGAGTCATGCTTAGTGGTATTATTTGCTGGTGATTATACTATAGCAAATGCCAGAAAACTAATTGATGAGATGGTTGCTAAAGGCTTTTTCCTAGTTCAGACAAAGGAGGTGTCAATGAAAGCCGAAGATGCTCAAAGGGTTTTTCATGAAAAAGCACCTGACTTCCTTCCTCTTTTGAACAAAGGTCCTGTTATTGCCTTGGAGTTCAATGGAGATGGCGCTGTGGAAGGATGTCAACTTATTGTCAACGAGACATTCAAAGGGACCAAGATATTTGTATCAGAAAGCAAGGAGACGGCACCTGGAGATGTAGACAGCTTCTACAATTTTGCTGATATACAGATGGGAATATGAAGTGCAATGAGGAACCAAGGGCTTCGTATTAAGCCCTTTTCAATTTGTGTGTTAGCAATGGGTTTTTTTTTAAACTGATGCTAAAATTGTTAAAGTCATTTTTTAAATAAATTGTTGAATACTGCATCATTTATGTGAGATTCGGAAAGAGTTCATTTTAAATTAAGTAGTTTTAATCAGCTTAAAAACCATTTAACCCAGTTCAGTGAGCTTGTAGGTTTTCTCTGCATATGATACTGTTATTAGAAAACAGAAGTGACTAGCAGTTCATTATTTTAATCCTAATTAAACATTCTTTCAAATCTCTAATTTACACTTTACTCAGTACTCTATAATACTTGTTTGAGAATATCTTCCATTTTCTTTTTTAATTTAGAAGGATTCCTTACTAGCTGATCAGTTAAAATGAACCTGTGTACATTTTTCTTGTATACATATCCAGTTAAATATTTGCTTCCTAGTTCCATAATATGGAAAATGAGATTTTGTGTACAGAGTTGACCTAATACTTTGTAAATTCAATTTTTTAATTAATAGGTATTTGATAACCAGTTTTGCAAGTAGCTCATGTTGGTATAACTGTTTAAAGACTACTTTAAACAGTTGTGAGTAGTATGCTTATTTGAATATATTCCACATTGTTTATTTTTTGAATAAAACTGTTAAATGACTCTTCTGCTTCCTGGTAGGAAAAGGTATATGGAATAATGAAACTATAGAAGCCCAATCACCAGCAGTTCACAAAGGTGATTACCGTTTTATCAACTCTTATGAGCTATTAGAATTAAAACAAAACCTTGCAGCATTTTTAGGTAAGAATACTTAAGCATCTTGATGAGTTATGCAGATTGTTAAGAAGCTAGATAAATTCCTATCAATCAATGTTCAAGTCTGGTAAAAATTATTTTGGTTGCTTTAAAGCATTATTTTCCAAATCAACCTGAACGTAATAATTTACCAGGGGGCAGGAGGGAGCTACTTGTTTAAAAATCCACATTCTTGGACCAGTCCTTAGGTGCATTGATTCAGTGCCCAGGGAAAACTGATTTAAGAGGGTTGTTGTAACAGAAAGTAATCAGAAGATTTTGATAGGTTGATCTTGTGAGAAGGGACTGAACCTGCCATCTGCATCACGTGCTGTGTGCCTAGTTACTCAGTCGTGTCTGACTCTTGCAACCCCATAGACTATAGCCTGCCAGGTTCCTCCGTCCATGGCATTTCCCAAGCAAGAATGCTGGAGTAGGTTGCCATTTCCTTCTCCATACAGAGTAGCTAATTGGAAGTTAGCTTTCGTAGGTCTATTTTTAAATTTAATTCTATTTTGATAAAACTAAGACTGAAAAAAATCACTTGCAAAAATTCCTCTTACAATTGTTACTAACAATTTATTTTCATGTTTAAACTCTCTGTGGATATTTTCAGATTCATTTACAACTACTGTATTGTATGTCCAATGTTCAGAAATAATACATTAAAAGACTTTTCACTTTAAACTAATAAGTAATGTTGACCACCTAGCCTGTGCCTCACCTGTATTAGCATCATATCATTTCAGTCTTTTATAAGAGCATTCTATATTACATAACCTCTCATTAAAATCAAAATGATTTTATAAGATGCAAATAAAAATCAGTGATGGATTTAATATAATTTTGATCATAATTTACAAATTAGCTTTGCCAAATAGTGGTCAGAGGGCATTAATTTTTCTCATAGGTAAGCTAAATTAAGCATATTCTTTCTGATCATAATTATATTATTAAATCTCATTATTCACAGTTTTAAAAATCATAATACTTTTTGTCTTCCAAAAATATAGTACAATGTTATGCAATGCTGTAGACTGAGTTCTTTATCTATGGTATTTTAGCAAAAACTCAGGAATATTACATATAAGGCAGATGTTAATTTAAAAATTTCCACTAAATTTTAGTGTCTATTAACCAAAGCCTAAAATTTTATACTCTTCAGTTAGGTAAGAGCTTTTACCCAGATTTAACTTGTCTTTTAGGACAGTTCTTGTTTCTGAATGTTTGAAAAGATTTTAAAAAATAAGTAGTACTATGGTTGTTGTTTCTATCACCTTAAACCTTGATTATAATTAGTATTATACATTTTACTTCTGAATGGCTTTTGAATTCATGCAAATGTATTAGCAATGAAAACTTAGTAATTTTATTAAGTTATAGATATTTGACATTATATTAGCTTATTTCTCTTGTGTCAATAGTACTGCTTTTTACTTCTATATATTTGTGTCTAGCTTTTGTATGTAATTTATCTAGTGTTTATAAAATGTGATTTGTAATAAATATTGTCAAAATGAAAATAATTTAACACCAATTTTTGAAGAGCACTTCTATAGTATAAATTTATTCATATGTGTACCAAAATTTGATCATGACACAACTTTTTTAATGATAAAAGTAAAATACAGTGGTCTAATCTGTCTTATATTAGTGAGAAATGAACTGTATGCCATGTTGTGTGTACAAAGCTCTCTGGAGAAATGCAGAGGAAGTAGAAAACTTGTTTTAATCTGAGGAATTTCCAGTATCATGTTCCCTTTGT EMBV3_32979 CCCAGCAGCTGCTGAAGACAGCTCTAAAAGGTGAACAACATGCCTATGATGGCCCTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20862 CCATTTCTGGACATGACTTCTGTGGTTTAAGCTTTGTGGAAGAATGCTTTGAATCCAAGG Gene BVV0102_300346 + 0 NULL GK000001.2:21698839-22123654 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08363 TGCAGAAGGATTTCGTGTTAGAGTGGATCTTGCAACTGAGACCTCCTCCAGGGACAAGAG Gene GeneID:537542|RBM34:NM_001110082:99_cdna Constitutive 0 NULL GeneID:537542 28 GENE RBM34 MGC133998 RNA binding motif protein 34 EMBV3_39164 AAAGGGAGACAGTTTACGGGTGTTTTCAGTGCTCTGTTGATGGGCAGAAGTACGTGCGAC Gene GeneID:618114|DFNB59:XM_002685262:67_cdna Constitutive 0 NULL GeneID:618114 2 GENE DFNB59 NULL deafness, autosomal recessive 59 EMBV3_29362 ACCGTCTTTTTCCTACCGCCTGTTCTCCGAGCTGCTTCCAAAACCGTCACCTGCTGTCTT Gene GeneID:510218|ALPK2:XM_002697834:526_cdna Constitutive 0 NULL GeneID:510218 24 GENE ALPK2 NULL alpha-kinase 2 EMBV3_24198 GCCGGACTTTCTGTAAGAAGTGTGGGAAGCACCAGCCCCACAAAGTGACACAGTACAAGA Gene GeneID:508165|RPL36A:NM_001034316:8_cdna Constitutive 0 NULL GeneID:508165 X GENE RPL36A MGC126932 MGC128327 ribosomal protein L36a EMBV3_23028 GGTTGTAAGTGTCCAGAGACGCATGCCTACCAGGCTTAAGAGGTTCCTCCCCACCAGCTC Gene GeneID:282887|MMP15:XM_002694798:632_cdna Constitutive 0 NULL GeneID:282887 18 GENE MMP15 NULL matrix metallopeptidase 15 (membrane-inserted) EMBV3_03878 AGGTTGTGCAGCTACGACATGACCCAGTCCCAAGTAACCCTGATGGCTCAACTCAGATCT Gene BVT0102_239434 + 0 NULL GK000019.2:56279839-56300361 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097913 TCONS_00097912 TCONS_00097914 1 XLOC_058372 Coding TCONS_00097912 XLOC_058372 Coding Coding - 19:56279917-56300281 - TSS72446 753 1 TCONS_00097912_1 122 4 0.963217600550017 0.000166670124168099 0.000174637861712867 4.16368151374698e-245 7.03776317804474e-05 0 1.67774621840051e-65 4.13179392384646e-06 0 5.63573104136584e-178 0.000133390662574694 6.21853577757016e-05 3.24694144135585e-56 7.62095290627327e-06 0 0.000807924967992429 0.00496328792104456 0.0010688784789569 0.00870767299259461 0.00137526008612932 3.67171174593175e-233 0.000306394214349186 0.00201490777235625 0.00133738097324132 0.00337143616731322 3.27676590577221e-05 2.39427673967783e-236 4.54844662778205e-127 9.39627472638162e-05 0.000551802673850538 0.000337271878270193 XM_005195862.1 TEN1 PREDICTED: Bos taurus TEN1 telomerase capping complex subunit homolog (S. cerevisiae) (TEN1), transcript variant X1, mRNA. 0.0 1317 100.00 0.968127490039841 NM_001113324.2 TEN1 Homo sapiens TEN1 CST complex subunit (TEN1), mRNA. 5e-111 405 84.28 0.48871181938911 TCONS_00097912_1 sp|Q86WV5|TEN1L_HUMAN TEN1L_HUMAN CST complex subunit TEN1; 5e-69 207 81.15 0.991803278688525 1 coding 0 0 0 0 1.17705221230537 0.190211835741698 -0.0420625458934969 0.413071936311168 CTTCTCCTTCACCGCGGCCCCAAGGCGCGTGACCGACCGCGGACAGGGCGTGAGGCGGCGGCTGTGCCGCTGTGGGCGCCGCCGGGGCGGGCGAGTCCCCTGTTCTCGGCCAGTGGCGCCTCAGAGCAGCCCCTTGACAAGCGGACCCCGGAAGAAGGAGCAGTAATGCTGCCCAAACCCGGGACCTATTTCTTCCCCTGGGAGGTCAGTGCTGGCCAGGTTCCTGATGGGGACACACTGAGGACATTTGGCAGGTTGTGCAGCTACGACATGACCCAGTCCCAAGTAACCCTGATGGCTCAACTCAGATCTGACCAGCACCCAATCCTCATCTGTACCAAGTTGGTGGAGCCGTTCCAAGCCCAGCTGGGCTCCCTCTACACTGTCCTTGGGGAACTGGAGCACCAGAAGGACGGAAGCTGCGTGGTGAAGGCCCGGGTGCTGACGTGTGTGGAAGGAATGAACCTCCCCTTGTTAGAACAAGCCATCCGGGAGCAGAGGCTGTACCAGCAAGAGAGGGACAGCGGCCAGTAGAGAGCAAACCAGGAGCTCCTGGGAATGCCACCTTCCCGCCCGGCCAGATGCTGGAGCTGCTGCAGAGAAGATGCAGGAGCGTCCCCCGAGTGACAGCCTTTGTCTGGAGAGACGAGGGGAGGGCAGCCTAGAGCTCTGAGGCCGGGCGCTGGGCCTCCTGTGGGTCCTGGAGAGTTCCAGAATGTCCCCATGAATAAAGCCTAGTGGTGTGACTGAGCA TCONS_00097911 TCONS_00094669 s 5' 0 TCONS_00097911 TCONS_00094669 s 5' 0 EMBV3_07749 ATAGCACACTGAACCTTCAGATTCATGCAGGTGTGGGAATATTCAGCTTTGCCAGGTACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00093 AAGCCTGTCTTGCTGCTGTAGAAAACGCACGGCGCAAAGCTCAAGAAGTCTGTAACCTTG Gene GeneID:782235|IRAK1BP1:NM_001110093:5_cdna Constitutive 0 NULL GeneID:782235 9 GENE IRAK1BP1 MGC133572 interleukin-1 receptor-associated kinase 1 binding protein 1 EMBV3_20363 GCAGAACAGCAGATATTATGGATGCTAGGTTGCATCTCAATGTTCAACCTTCACTGAGAG Gene GeneID:783948|RSL24D1:NM_001080355:10_cdna UTR3_Alt 1 NULL GeneID:783948 10 GENE RSL24D1 MGC128501 RLP24 ribosomal L24 domain containing 1 EMBV3_26627 GGGCCAGAACGAACGTGGGAAAGCAGCAGCTAATTTGGAGGGGAAACAAAAAGCAGCTGA Gene GeneID:317659|DNAJC6:NM_174836:19_cdna UTR3_Alt 2 NULL GeneID:317659 3 GENE DNAJC6 NULL DnaJ (Hsp40) homolog, subfamily C, member 6 EMBV3_24782 ACATCATCTTCGTACAAGGGAGACTCAGGGCATTGTGGTGAACATAAGCACCTTGGTAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08104 TTTTCCAGTGAATGTGACCAAAGCAGAGAGGATCAAGGCAGTGGAGAGGGTTTGCAAGAG Gene BVT0102_400357 - 1 EMBV3_23180 GK000029.2:43936187-43943683 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38706 TCCGAGAAGTTAGCATTTCAGGATCAAAAGGCACTTCCGGAGGCAGGGCCATGCTCACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03871 TCTCCAGTGAAGTCTGTTCATCCCTTACCCCCAGTTTTGGCCGGACCTTCCTTTTGGACT Gene GeneID:538470|ENTHD1:XM_002687936:175_cdna Constitutive 0 NULL GeneID:538470 5 GENE ENTHD1 NULL ENTH domain containing 1 EMBV3_10597 CTGTATTGGGAGTGAAAGGCGGCCCAAAGGGAAGAATATGCAGAAACGCAGATCAAAGGG Gene GeneID:614997|LIN28:XM_002685696:364_cdna Constitutive 0 NULL GeneID:614997 2 GENE LIN28 NULL lin-28 homolog (C. elegans) EMBV3_29453 CCAAGACAACTTTCATATCCTTTCCAGTTAAAAGATTTGTGAATGGTTCTGCTAGAGTAC Gene BVV0101_031379 + 0 NULL GK000007.2:44067230-44077000 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34843 GGGAGTTCGCATGTTCCTAATTCTTTACGACACTTTCCCGCGTCAATTCATCTGGCTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26355 GCTCGATTCCCGGTTGGGGAACTAAGATCCCACATGGCATGCGGCACAGCCAAAATATAA Gene BVT0102_057129 + 0 NULL GK000021.2:68151561-68377170 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33294 CACACCTCACTTAGGAACATAGCTTACAACTTAATATTTAAGGGTGACCATTTTATGGTT Gene GeneID:514769|ZNF674:NM_001102010:20_cdna Constitutive 1 NULL GeneID:514769 X GENE ZNF674 MGC151523 zinc finger family member 674 EMBV3_19583 CTTGGCATTGGGCAAATTCTATGGATCAGGCTTTGACTGTAGGACCTCTGATTCCCACTG Gene BVV0102_082134 + 0 NULL GK000030.2:79954815-80027523 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10566 ACAGAGAAGCGAAACTCACCTCCATGAGGGTAAAGGACAGACGTGCTGGAGAGAGGAGAA Gene BVV0101_068287 + 0 NULL GK000002.2:14751323-14953995 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101646 1 XLOC_061729 NonCoding TCONS_00101646 XLOC_061729 NonCoding NonCoding LOC100847482 2:14864315-14893171 x TSS75911 352 1 TCONS_00101646_1 47 4 0.987939698492462 0 1.15476570009087e-10 2.59426740953882e-09 0 0.00016831335364569 0 1.09897613818828e-10 1.30821119018783e-09 0 1.06359290403528e-09 0 0 7.11855110661919e-10 0 0 0 0 0 3.54668082541265e-10 1.26262223360187e-09 0 0 0 0 4.98298666152689e-10 0 8.70893418590855e-10 0 0 0 XR_230260.1 LOC100847482 PREDICTED: Bos taurus uncharacterized LOC100847482 (LOC100847482), 2e-10 69.8 100.00 0.105113636363636 0 noncoding 0 0 0 0 0.157015071283152 0.400443186608386 -0.0381783276149835 0.470631874853864 CAGTCCCTGCCCACCAATAGGAGGCCTGGAGAGGACAGAGAAGCGAAACTCACCTCCATGAGGGTAAAGGACAGACGTGCTGGAGAGAGGAGAACAGCAGATTCCTATACTGTGCTCAGGCGACTTGCTTGCAGTGTGTCTTCTCATTCTGGAGCCTCTCCCGAGGTCCTAAACCACAGACTTCCCAGTTTGACTAGATGAAGATCAGTTTCCTCAATTCTTTGTTCTCCACTCTGAACATGAATTTACTCTCATTCTCTATATGATTATACCTTCTCTACATAACATCTGGACCTATGGAACATCTGCACAGCTTTTCATCTGGATGTTTGGCAAATACAGAGACAGTGTT TCONS_00104514 r 5' 0 TCONS_00104514 r 5' 0 EMBV3_08530 ACTGGGGGACTTCCCTGGTGGTCCAGTGACTAAGACTCCAAGCTCTCATTGCAGGTTCAA Gene BVV0102_064896 + 0 NULL GK000004.2:93358142-93379468 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42008 CTAGGGTACATCATATGGTCATCACCATTTCTTACATCTGCCATCGTCATGAACATCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16527 AGGGACCAGGTTCTCCGGGCGCTGGTGAAGGAGGCAGCAAGAGGTTTCTTTGTGAGAAAA Variant GeneID:788142|MGC152321:NM_001099207:184_cdna 224^313 2 EMBV3_07946 GeneID:788142 3 GENE MGC152321 NULL similar to KIAA0454 protein EMBV3_05567 TGCGTTTCTAGGTATAAGCAGACTAAATGTTGGCCCAGAATCAGTGTTGGGTTATCAGTT Gene GeneID:539275|CHD9:XM_002694778:577_cdna Constitutive 2 NULL GeneID:539275 18 GENE CHD9 NULL chromodomain helicase DNA binding protein 9 EMBV3_04517 AAGGGAAGAACTGTCCAACACTGGTCTATTAGTGAGGTACTTAGAGGCTCCTTGACCTGC Gene GeneID:512662|CHP:NM_001075576:145_cdna Constitutive 0 NULL GeneID:512662 10 GENE CHP NULL calcium binding protein P22 EMBV3_04562 AGAACGGGCTGGAAAAGGACTTCTATGGCTACCGGACGTGGTTCACCGTCGTCAACTTTG Gene GeneID:100337117|LOC100337117:XM_002696184:178_cdna Constitutive 0 NULL GeneID:100337117 19 GENE LOC100337117 NULL otopetrin 3-like EMBV3_23415 ACGGTATCCATTGGAGGACGGCGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATAC Gene BVT0102_015792 - 1 EMBV3_30017 GK000015.2:80115034-80162249 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117923 TCONS_00175509 TCONS_00118040 TCONS_00210913 TCONS_00226167 TCONS_00219592 TCONS_00040258 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00174808 TCONS_00174809 TCONS_00174807 TCONS_00132066 TCONS_00232829 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00078426 TCONS_00207934 TCONS_00174805 TCONS_00080712 TCONS_00175564 TCONS_00206300 TCONS_00171428 TCONS_00242416 TCONS_00207933 TCONS_00205125 TCONS_00174806 TCONS_00056149 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00242415 TCONS_00001866 TCONS_00110426 TCONS_00206299 TCONS_00246741 TCONS_00001865 32 XLOC_072089 XLOC_105290 XLOC_072206 XLOC_129423 XLOC_137940 XLOC_132911 XLOC_024074 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_126448 XLOC_049596 XLOC_105345 XLOC_124877 XLOC_103815 XLOC_149080 XLOC_124587 XLOC_033952 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_149079 XLOC_066330 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_09882 CGGAGTCACCCCAGCAAAACCTAACCGATATTGGCTTTCCCTCACTATCGGAAGAAACGA Gene GeneID:508014|TMEM102:NM_001075344:48_cdna Constitutive 0 NULL GeneID:508014 19 GENE TMEM102 MGC139196 transmembrane protein 102 EMBV3_13152 GAGAAATCACAAGCCGTCCCGATCTTTCTCTAGGTCTCGTAGCCGATCTAGGTCAAATGA Gene GeneID:540276|SFRS3:NM_001034700:62_cdna Constitutive 0 NULL GeneID:540276 23 GENE SFRS3 MGC127913 splicing factor, arginine/serine-rich 3 EMBV3_19193 ATGTACCTTCAGGAAAATGGCATAGACTGCCCCAAGTGCAAGTTCTCGTACGCACTGGCC Gene GeneID:509856|RNF31:NM_001101918:110_cdna UTR3_Alt 2 NULL GeneID:509856 10 GENE RNF31 MGC142809 ring finger protein 31 EMBV3_37301 GATAAGCAGTGCGAACAAGCTGTGTATCAGGTTCCCACCAGCCAAAAGAAGGAAGGTGTT Variant GeneID:538818|DAB1:XM_002686368:150_cdna 559^663 1 EMBV3_37724 GeneID:538818 3 GENE DAB1 NULL disabled homolog 1 (Drosophila) EMBV3_17419 ACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCAGCAACCAGGC Gene GeneID:510004|NUP93:NM_001098921:183_cdna Constitutive 0 NULL GeneID:510004 18 GENE NUP93 MGC157081 nucleoporin 93kDa EMBV3_09210 GTTGTGCCTTGTTACCTGGTTCCAGTTGCTGACTGTGGTTTTAGGATCTTCCACAGCACG Gene GeneID:540589|MTMR6:XM_002691845:119_cdna UTR3_Alt 2 NULL GeneID:540589 12 GENE MTMR6 NULL myotubularin related protein 6 EMBV3_25880 TCTCTCGAGCTCCTTTGCCTGTGGAACACTGTCTGGTCCTTGCTGTGGTTCCTGTCACTC Gene GeneID:535946|LOC535946:XR_084545:376_cdna Constitutive 0 NULL GeneID:535946 19 PSEUDO LOC535946 NULL similar to CG4699 CG4699-PA EMBV3_07569 CTGAGAAGTCTTCTTGGAGGGATTGCCCAGCTGCCTTGGCTGTCGAAGAGCTTGGCTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07550 AAAAGGGGAAGAAAAAAGTCCATGAAAACTAAAACTTCATGTTTTTAGCCAGTGAGGAGG Gene GeneID:781847|NUFIP2:XM_002695672:187_cdna Constitutive 0 NULL GeneID:781847 19 GENE NUFIP2 NULL nuclear fragile X mental retardation protein interacting protein 2 EMBV3_39868 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30509 TTGAAGCTAAGTGGCAGTTCTACCTGGAGGAGAGGAAAATCATCGAGGACACGGAGAACG Gene GeneID:519627|ADPRHL1:NM_001034534:60_cdna Constitutive 0 NULL GeneID:519627 12 GENE ADPRHL1 MGC128562 ADP-ribosylhydrolase like 1 EMBV3_01167 GTCACCTACCTGTTCGTGCAGCTGTGCAAGGAGTTCATGAAGGCCAGCGTGGACGTGGCA Variant GeneID:535038|TMEM147:NM_001034624:691_cdna 256^315 3 EMBV3_32991 GeneID:535038 18 GENE TMEM147 MGC127848 transmembrane protein 147 EMBV3_34055 GACAACTCGAACAGAAATCCAATTGCCAAAGAAACACTGGGGAAATTAACATAACAGCCA Variant GeneID:529902|DSG3:XM_002697687:196_cdna 297^390 1 EMBV3_40809 GeneID:529902 24 GENE DSG3 NULL desmoglein 3 (pemphigus vulgaris antigen) EMBV3_33505 CATGTTGACTTGGAACTTATAAAATAAGCCATGTAAAATCACTGTGGGGCTTTGGGCCAC Gene BVT0102_099027 + 1 EMBV3_16690 GK000004.2:66312456-66346470 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20329 AGCAAGAACTGTGCTGCGCCGGGGTGGCTTGGAGAGGGGTTTTTCTAGTGAGCCTTAGAA Gene BVV0102_048212 + 0 NULL GK000008.2:44108069-44310612 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16104 CACAGACTAAGAGTGCAGGTGTAAGTACTCTGAGGCCACGTTCTTCCTCCCTCAGTTCAT Gene GeneID:100295196|LOC100295196:XM_002692068:172_cdna Constitutive 0 NULL GeneID:100295196 13 GENE LOC100295196 NULL hypothetical protein LOC100295196 EMBV3_18206 AGCAAAGAGGGCTCTATCTGGAACCACCTGGGCCTGTGTTTGGAAGCAAAGACAACTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13464 TCAGGTTTGGCCGTCCATCAGATCATCACCATCACCGTCTCCCTCATCATGGTCATAGCT Gene GeneID:616582|AJAP1:XM_002694117:451_cdna Constitutive 0 NULL GeneID:616582 16 GENE AJAP1 NULL adherens junctions associated protein 1 EMBV3_12462 CCACGCGTGCTCGAGTCTGATGTAGAGCGAGTTGTCTAAACTCTTGGGTGTTTCGTGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27200 AATCCAGCTGCTGCAAACCCTGCTGCTCCCAGTCCAGCTGCTGTGTTCCTGTTTGCTGCT Gene GeneID:100336886|LOC100336886:XM_002699431:114_cdna Constitutive 0 NULL GeneID:100336886 29 GENE LOC100336886 NULL hypothetical protein LOC100336886 EMBV3_36820 ATCCTCCAAGTCCCATACTTCCCCTGTGACTACGATCCTTGGAATGCTCTGTAAGATGGG Gene BVV0102_111919 + 0 NULL GK000017.2:67536732-67543374 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081623 1 XLOC_050502 NonCoding TCONS_00081623 XLOC_050502 NonCoding NonCoding - 17:67539727-67541099 - TSS61563 1372 2 TCONS_00081623_2 144 1 0 0 1.46478709581727e-05 0 0 2.15912373165402e-05 0 0 0 8.6262399775366e-05 0 0.000143491135635637 0 0 1.71428424805419e-05 0 0.00239667755499295 6.05038406243654e-05 0.00448051767172922 1.04532431041805e-05 0 0 0.000976260741809939 0.00106985966721668 0.00135632292494038 0 2.05406463496988e-05 3.84345987711763e-05 3.50043240542304e-05 1.4153354338605e-05 1.3146271867391e-05 XM_005218109.1 KIAA1671 PREDICTED: Bos taurus KIAA1671 ortholog (KIAA1671), transcript 0.0 2473 100.00 0.998542274052478 NM_001145206.1 KIAA1671 Homo sapiens KIAA1671 (KIAA1671), mRNA. 1e-133 480 75.25 0.491253644314869 0 noncoding 0 0 0 0 -0.162892011247277 0.349621136780144 -0.00405058163783726 0.949121267596285 GTACAGGAAGCTGGACGACGGCGGCCTCTGAGTGAACCAGCATTGCAGGGTGAGGTCTATGGGGAGGGGGAGGAAGGCTCTTTCTGCTGGGAATTGCCCCTCCCTCCTGTTTCAGCCGTGGCGTTGCTACAGTCAGACTGTGCCTTTCCTCTTTTGACCTGTGTTGAAACAGGAAAGTGAGAGAAAAAAAGCCCCATGGCATCATGATGCCATGGGGTAGGAGGGACCCACTCCACATCTGGATGGGGGTCCACCCCAGGCTCGCCCCCTTAGGGAGTGGTGGATCTGAGTCCCGTGCTGAGAGCCACCAGGTGCCACCGTGTTGGGATTCTGGGCAAGGCGAGGGTCCCGAAACGCAGAGCCACGTAGAGAGCCAGCAGGCACACACGCACTGCGTCTCGGCCAGCCCGTGTCTCCTTTGGCCCCCCGCCCCCATCACCCCTCTAGAGATCTCTTTGTCTGAGTTGGCTTCTGCAGGGAAGGGAGGGCCAGAAAGGTTCTTGGAAAGTCAGCCTGAGATTTCTGGCAAGGTCACCCCTCAGCCCCTCCCCATCGTCCTCTCCGAATCCCCTTGTCACCCTCATGCCTGGCACCACACCGTCTCATGAATCAGCCTGGCACTTTCTTAACCATCTCTGGTGGCGTTGTGCCTGCTTAAGAAAAATATATGTATAGTACCAGTTGTGTGAAAGAATGGTCTCGTTCCACACCGCCTTATAGATCCATAAATATGGGGCTTGTACAAGTCATCTATTGTGTTCGGGGAGATATTTTGTGCTGCGTTGTTTCTGAAGTCATATCAGTATCCTCCAAGTCCCATACTTCCCCTGTGACTACGATCCTTGGAATGCTCTGTAAGATGGGGGGCAGTGGAGATATACGTATACCTACACCATTGTATTTTCCTGACCTTTCTCCTGGGTCCCTTCCTCCAATATCTGAGTCACGATCGAAAAGGAACCCGAGTCCTGCGTGCGGGAAAGTTGAAGCGTCCTGCCAGCTGGTGTCCTCGTGGTTGCCTTACGAATTCACGGGCTCCAGGAGGTTTGAACGGAAGGCGGTCGACCGGCACTTTATTCAATCCCAGAAAGGACCTCTCTAATCATGTGACTGAGAATTCATCCAGGAAAAAAAAAAAAAAAAAACTATATTTTTAACGTCAAAACCAACGGGGCTTCCCGGACCTCTCAGAGTATCGGATGTCTACAAGTGCTTTTCTATTTTGTAACTGTAAAGAGATTTCATACGCACAGCAGAGCAGTTGGGAGTCTGGTCGACTGCCCTAAAACACAATGACCTTTTGCATGTACAAAGATGTCACATTCAGACTCTGGAAACAGCAAATAAAGCTTTGACGCGAGCTGCCCTGGAG TCONS_00076057 . 5' 2276 TCONS_00076057 . 5' 2276 EMBV3_30543 AGCTCGAGAGCTTGGATTTTAAAACACGTTTCTCCCCGAGTCGTGTCCGGCGGAGGGTCT Gene BVT0102_416972 + 1 EMBV3_27649 GK000001.2:85934783-85974118 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40598 GCCAATTGATGTTGCCACTGATGAAATAAAAGATAAAACTGCAGAGCTGCAAACGGTTTG Gene GeneID:537297|DOCK11:XM_002699465:2_cdna Constitutive 0 NULL GeneID:537297 X GENE DOCK11 MGC140073 dedicator of cytokinesis 11 EMBV3_15496 TTCTAGCATGGCCGCTGACAGCCCGAGCAGAGCTCGCTGTGGCCCATGACCTTTGGCCTG Variant GeneID:338079|NDUFS7:NM_001038022:17_cdna 136^253 3 EMBV3_08408 GeneID:338079 7 GENE NDUFS7 MGC133683 MGC152557 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) EMBV3_38991 AAAACAAAAAGGAGGGAGTTGACACTGTTCCCCCACAGAGGTAGTCATGCTGGTTGCGTG Gene GeneID:539510|GDF10:NM_001076167:32_cdna UTR3_Alt 2 NULL GeneID:539510 28 GENE GDF10 MGC140700 growth differentiation factor 10 EMBV3_12196 TTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGAGATGCAGTAGGGTGCGA Gene GeneID:539393|RGP1:NM_001038184:59_cdna Constitutive 0 NULL GeneID:539393 8 GENE RGP1 MGC134309 RGP1 retrograde golgi transport homolog (S. cerevisiae) EMBV3_12018 ACCCTGAGGACATCTTCACCGTGGAGGAAACCCTGTCACTGGCGAGTGCACCAGCAAAGA Gene GeneID:100336476|LOC100336476:XM_002686587:44_cdna Constitutive 0 NULL GeneID:100336476 3 GENE LOC100336476 NULL colony stimulating factor 2 receptor alpha chain-like EMBV3_28824 ATGAGACTTGTGGTATCTTAGCTCCCCGTCCAGGGAATGAACCCACACCCCTACAGAGTA Gene BVT0102_175617 + 1 EMBV3_15610 GK000022.2:36738158-36876903 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25280 TGTGTCGAGATGTTGCACAGTACAGGCTGATCAAAGAGGTCGATGAGATCACCCACAATG Gene GeneID:519068|TEKT1:NM_001075783:117_cdna Constitutive 0 NULL GeneID:519068 19 GENE TEKT1 NULL tektin 1 EMBV3_40158 GGGGAAACCCTGATCAGAACATGAAGCACTTCCACCAGCTTACACCTCCTCTATACAACG Gene GeneID:507578|LIPK:XM_002698343:48_cdna Constitutive 0 NULL GeneID:507578 26 GENE LIPK NULL lipase, family member K EMBV3_01326 CCACGTGATGGAAACATCTGGTATCTTATCGGAATAGTAAGCTGGGGAATGGACTGTGGG Gene GeneID:518437|LOC518437:XM_002688315:163_cdna Constitutive 0 NULL GeneID:518437 6 GENE LOC518437 NULL similar to serine protease Desc4 EMBV3_11653 TCTGGAATCAGTGGAGAAATCAAGCCAGATGCCTCTTACTCGCTGGTCCTTTTAACACAG Gene GeneID:513430|HEPACAM2:NM_001101974:39_cdna Constitutive 0 NULL GeneID:513430 4 GENE HEPACAM2 MGC159765 HEPACAM family member 2 EMBV3_40998 TCTCTCCCTCTAGTCCTACCCACATGATCTTCATTCCTTTCTGTCTCCAGTTTAAAAGGG Gene GeneID:539275|CHD9:XM_002694778:577_cdna UTR3_Alt 2 NULL GeneID:539275 18 GENE CHD9 NULL chromodomain helicase DNA binding protein 9 EMBV3_42743 ACTATTCCCTCCCAAAACTGGTGTCCCAGCACCCCTGACCTCACCAAATCTCTAACATTC Gene GeneID:504463|SIRT2:NM_001113531:538_cdna Constitutive 1 NULL GeneID:504463 18 GENE SIRT2 NULL sirtuin (silent mating type information regulation 2 homolog) 2 (S. cerevisiae) EMBV3_40108 TCTGTGTTATGGACCTAGAGCCTCAGGGTATTCAAGTGGCTCGAACCCAAGAACTGAAGC Gene GeneID:532070|MPP4:XM_002685490:223_cdna Constitutive 0 NULL GeneID:532070 2 GENE MPP4 NULL membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) EMBV3_24907 ATTAAGCCTTTGTTAATTGGTGAACAAGATTTTTGTAATTTTTATAATTACAAAATTACA Gene GeneID:532881|FGFR1OP2:NM_001102147:14_cdna Constitutive 4 NULL GeneID:532881 5 GENE FGFR1OP2 MGC143105 FGFR1 oncogene partner 2 EMBV3_13563 GAGCTTTCTGAGCATGTTTGTGGTCTTTGTGATCTTCGCCATCTGCTGGGCGCCGCTGAA Gene GeneID:528665|MTNR1B:XM_002698996:35_cdna Constitutive 0 NULL GeneID:528665 29 GENE MTNR1B NULL melatonin receptor 1B EMBV3_17995 GATCAGAGAAGCAGGAAGGCTCACACACGAGCGGTAACGTCTGAAGCAGTTTGAAAACAG Gene BVV0102_057290 + 0 NULL GK000013.2:54373973-54382945 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045551 TCONS_00045546 TCONS_00045547 TCONS_00045545 TCONS_00045548 TCONS_00045549 TCONS_00045544 TCONS_00045552 TCONS_00045550 1 XLOC_026464 Coding TCONS_00045544 XLOC_026464 Coding Coding DNAJC5 13:54379331-54390532 j TSS33211 4566 2 TCONS_00045544_8 233 6 0.592857142857143 1.87165542123331e-08 1.07716805947159e-08 1.81361961797057e-09 0.0004615576792244 6.10763672175063e-05 9.87106485898408e-05 0.000106552133973656 2.78248651831103e-14 0.000296494754855296 2.19307433302581e-08 5.72459827205023e-05 1.10626887047263e-19 5.89320792191503e-05 4.36753176748607e-27 2.68007639141807e-17 0.00803723719945042 0.0051445011076204 0.000437967937975421 2.11352867710351e-05 0.000447298250718821 0.00017365594384299 0.00391310329405302 0.00131485564847686 0.00335748473340168 0.000431258686138405 0.000559598968144248 0.000206945652002246 0.000868857017995026 0.000208908213809135 0.00160187479939373 XR_236996.1 DNAJC5 PREDICTED: Bos taurus DnaJ (Hsp40) homolog, subfamily C, member 5 (DNAJC5), transcript variant X1, misc_RNA. 0.0 1227 100.00 0.148707840560666 NR_073369.1 Dnajc5 Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 5 (Dnajc5), 0.0 1032 83.12 0.210687691633815 TCONS_00045544_1 sp|Q29455|DNJC5_BOVIN DNJC5_BOVIN DnaJ homolog subfamily C member 5; 1e-120 343 100.00 0.976047904191617 1 coding 0 0 0 0 -0.123085698907662 0.579514988975883 0.0756448462355581 0.157244501188514 GTCCAGGAGGTTCACAGTCGGCCTGTTGCTGCTCCTTAGACTAGCGTGCCATGGCAGACCAGAGACAGCGCTCACTCTCTACCTCTGGGGAGTCCCTGTACCATGTACTGGGGCTGGATAAGAACGCAACCTCGGATGACATTAAGAAGTCCTACCGGAAGCTGGCCTTGAAATACCACCCTGACAAGAACCCTGATAACCCGGAGGCTGCAGACAAGTTTAAGGAGATCAACAACGCCCACGCCATCTTGACGGACGCCACGAAAAGAAACATCTACGACAAGTACGGCTCACTGGGGCTCTACGTGGCCGAGCAGTTCGGGGAGGAGAACGTGAACACCTACTTTGTGCTCTCCAGCTGGTGGGCCAAGGCCCTGTTCATCTTCTGTGGGCTCCTCACCTGCTGCTACTGTTGCTGCTGCCTCTGCTGCTGCTTCAACTGCTGCTGTGGCAAGTGCAAGCCCAAGGCGCCTGAGGGGGAGGAGACGGAGTTCTATGTGTCCCCCGAGGACCTGGAGGCGCAGCTGCAGTCCGATGAGAGGGGAGGGCACTGACACTGTGCGGGAGTGTTTGTGGTGGCAGCGGGACGGTTGAGGTGTGAACGTGGACGCTGGAGAGGCCGCAGACACGCCGATCGTCATCCAGCCGGCGTCTGCCACGGAGACCACCCAGCTCACGGCTGACTCCCACCCCAGCTACCACACCGATGGGTTCAACTAAATCCAGGATCAGTCAGCACCCGGCCACTCAACCTTAGAATCATGAACTGTAGTCACAGAGATGGCGTGGGAGCCGCCCTGGCCCCAGGAGGGCCGCGCCGACCCGCCTCTGTGCCCGCCCATCCACCCCCGACACATGAAGTGCGTAGCATGCAGTATTTAAAGCAGTTTAGCTACGGTCTTCTTCATCTTCTGTTGTTTCCTTTTTTAATAGCATGTATGGGTTATGTCCATGTCTGTCTGTGTTGTGGGCGTGTTGCAGCCAGACTGCATTCACCGGACGTGGGGCTGCCTCAGGACTCTCAGGCAGGTTGGCGTGGCGGGTGGATGGCCCTTGTGGTCCCTCACCACCAGGTGGGCTCAGGCGGGATGGGCACTCTGTTTCCTGTTTTCATGGGGGCCTGAGGCAGGTGCTGCCTGATGGAAGCTGTGGGGTCTGCTCCCTGCCCTGTCTGCCTACCTTGCAGCCACAGACAGGGCCTCTGGACTCACTTGACAGGAAGGAGCTGGGCCTGGCTCCCAGTCCCGGGGTGTTGCCCTGTGGTACTCACGCTCACCTCATCTGCTTCACCTCATGGCAGGTATTCCCGTATCTGACCTGAGGCCCCTGTGCTTCGAGTGTGCTCCCTCCCCTGCTGGGACGTCCCTGCAGCCTCCATGCTCCCCTTCCCTGCACTGCCCTCCACATTCCTTCAGGCCCACCTGGCCTCTTTGTAATCCTTTCTTGGACCTCCAAGAACCACAGATGGTATCAGCGGCCCAATTAGTGGTGGTCAGAGGGGCTGAATCCAGGCTGCCGGTGGTGAGTGGGCTGCATAGCCCTCTTGCTTCCCACCCCCAACCCACCTCCAATCCACTTTCCTCCACCTGCTCCCTTTGGCCATTGTGGATGGTTTGGGCAGTTAGAGATGTCGAGCTCATGGAGGAAGGACCAGCTGGACCAAAGGCACACTCTGGGGAGAGGGTCAGTCCCCAGGAGGCCTCGGTCCCCTTGGCTCATTCACCTGCAGCCAGACCACAGAAGCTTTCTCACCTGTCTCAGCACCACCACCTGTGGACTGTCGGAAGCCAGTCTGTCTTGTCTGCGTCTAGCCCTGGGGTAGTCCACCACTGTGAGGACTTGGAGACGTGCTTGTGCTGGGCCTGTGTCACACCTGCACCTCGAGACCTGTGTGGCCCAAGCAGGCCTGCCTGGTTTCTGCAGAATGAACCTAGTGACCACTGGACTCCTCCTCAGTGTCCAGTGGGGGAGGTTGTGGGCAGGGGCTGCACGTGAGGAGGTCAGACGCACCAGGACACCCTCCCAGAGCCACTGTCCCCCACACCACCTGCCTACCCACGGCCCCAGCTTACTCGCTGTGCTGTGCTCTGCAATCACCAGGTCCAGAGGCACTTAATGGTATTGTTTTATTTGGGGTTTTTGCCTGTGAAAATGATCATGAAGACATTCAGTGAGAGGTGAGATAAATGCACTGGTATTAAATTAGAAATAACATGCTAAAATCAGACTTCTTAAAAGAACAAGGAATCAGTTATTTGACCTGTCCAGGACCAGGGAGGAGGCTGGTCTTTGGTGCCAGCCCCAGGCAGACATCAAGAATTCAGCCTGAGAGCAGGCCCTAGTCAGCCATCCTGTTTCTGGAAATAGCTTAGGAAACGAGTTGTTTTTCCCCAGAATGGCCAAAAAACAAGTTCAAAGCTTGGACTCTAGCAAGGCAGGCAGGCGCCCCTTCTGCAGTGGGTGGGTGTGTTGCTTTGCGGGTGGAAGACTCCAAGACCCACCCCCCCACAAGTCAGGGTGAGTCCCTTGCCAGGTGTGTCTCAGTTCCGGAATCTTACTGCTCATCTGCTGGAATCGTGACGATCCCCTAGAGACCAGGGTGCCATGGAAAAGGGGCAGGTCTGCAGGTTTGTTGAACCCAGTCTCCCACAGAATTGCAAAAATCTAGTAAATCATGATGACAATGACAACAATTCTCCTGGTGATGGTAACGACTGCATGAGGCCCAGGTCCCCAAGGAGCCAGCACCTGCTAGGTCTAGACCATGCCCCTTCACCTGACCCTGACTCAGACCCTGTGTGTCCTGCGTGTCCAGTTTGTTGATCTGGAAGCAGAAAAAGTCTGGGAACCTTCAGGCACTCACCCTGACTGGAGACCTAGGCCCCTGGCTGTGTTTCCCTGGTGAGCAGCGTATTGTGTCTGGAGCATCCCCTGTTCGTGTGTTCAGAGGAGACGACCCTCTCCCTGCTGTGGCGGGAAAGGAGAAGTGCTGTGGCTAGTGCTGGGGTGCCCTGTGGTGCTGCAGGAGCATGGGAGTGGCTGAGGGGCGGTCAGAGGCTGGTGGCCTGTAGATTTCTGTTTCTGCTTGGTGACGTGGTCTCTTGTCTTCCTTGGGCGTTATTCTGTTTTCAAACTGCTTCAGACGTTACCGCTCGTGTGTGAGCCTTCCTGCTTCTCTGATCAGTTGAGCAGCCAGCACCACGAGGAACCCATTAGGGAACATGGACATGGCGCTTCTGCTCTGGGTGGGGCGGAGGACCTGTTCCAGGGCAGATGGGCAGCCTCCCTGGCACCTGGTGTGAGACCTCCAGTGAGTGGGTGGGTGCCCAGAGCCTGGGGGCCCTGTCCGCCCTTCCCTGGCTCTCAGCAAGCCCCGCCAGGGACACAGCTTGCTTGTGGGGTGTGGTGAGAGGGTGTGAAAAGTGACTGATCTCATTCCTTTCCCAGTATTCTGAGCTGTGAACCCATGTGACACAGGATTCCTGTTATGCTTTTTTGGTTGTGACTCCTTCTCCTGTGGAATTGGCAAAAGCTACATTTTTACTGTCCTTTCAAGCACGGTTGGCGTCGTCTCTGCTGTAGGTGTGGGCAGTGTGTGTACATATGTGTATATGTATATATCACCCAGCAGCGTGACTGCTGCCGTCCAGGGCAAAGCGACAGTACAATAAATGTTGGCTCCAAAACTGCCTCTGGTTTCTTGATCAGTGGGCAGGAGCAGGGGTCTGGGCAAGCTGGCCTGCTGCGCACAGAAGGAAACCCCGACCCTGTTGTGTCCTGGGATAGGTGTGGGTGGCAGGCCAGGTGTCAGCCTCTGGGGGTGGGGGGCAGGGCTGCCTCCCTATCCCTGGGGACTCACCTGACCCCTGAGGTGAGTGTCTCAACCCCTCCCTCCTTTGAAACATTAAAACCCATTTTCTAGGCATCAGATACAACCAGTGACAAAGCCGCATTCCAAGGGGTCTCTCTCCTGACCCCAGACCCACCCAGAGGGTCCCTGTGAGGTAGGAGATGGGCTCCAGCTTGGACATTATTCTCCTACCTCACCTCAGGGAAGAGGCTGGGCGTGGGTCCTGTGCTCAGCAACTTCTGGTCGGTTTTATCTCCTTGGAAATGGGATGGTGTTTCGGGTGGGCAGGGGAAGCAGTTTACACTGAAACCTGTATACGTTGTGGTTAGAAGCTAAATGCGGGTTCATGGACCATGGTCGTCCATGTGCTGGTTTGTCCTGCTGCTGGGGTCCGACCTCTGTCCTGAGCCCGTGCACACACCTGGGGCTAGGCTGAGGGGTCACGGAAGTTTCCCATGGTGATGGTCTCTATGTCTGAATGTTGACCTATAATAAAGATTACTTGTAAAAAATAAATGTTTTCACTGCAGACCAGGTGTATGTCTTATTTAATGATCCCTGCATAATCCTATTTTGGGGGGAGTCTTACACTCTGGGGGCAGCTAACCTCCTTGGCCCTCCTGAGGTTGATGGTAGGGAGAGAGGGGCAGGTGACATCCTGTGCCCCATCGGGCACCCCTGGACACAGTACAGGCAGCTGCCTTTGTACCTGTCTC EMBV3_19771 CAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCGTGACAGTCCTCACTTAT Gene BVT0102_058954 + 0 NULL GK000010.2:87200983-87269473 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118459 TCONS_00118040 TCONS_00210913 TCONS_00068632 TCONS_00087832 TCONS_00252081 TCONS_00250500 TCONS_00040258 TCONS_00148960 TCONS_00250203 TCONS_00031886 TCONS_00133817 TCONS_00039692 TCONS_00110425 TCONS_00123823 TCONS_00246739 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00068635 TCONS_00174807 TCONS_00132066 TCONS_00250681 TCONS_00022895 TCONS_00030963 TCONS_00068633 TCONS_00107436 TCONS_00078426 TCONS_00091304 TCONS_00207934 TCONS_00170890 TCONS_00174805 TCONS_00023655 TCONS_00171428 TCONS_00206300 TCONS_00207933 TCONS_00010280 TCONS_00205125 TCONS_00174806 TCONS_00188145 TCONS_00091323 TCONS_00118487 TCONS_00125692 TCONS_00091300 TCONS_00002600 TCONS_00248945 TCONS_00000529 TCONS_00068634 TCONS_00103962 42 XLOC_105290 XLOC_072622 XLOC_072206 XLOC_129423 XLOC_041752 XLOC_052621 XLOC_155022 XLOC_153443 XLOC_024074 XLOC_090838 XLOC_153146 XLOC_018131 XLOC_081223 XLOC_023509 XLOC_066329 XLOC_075375 XLOC_151107 XLOC_083377 XLOC_104695 XLOC_080699 XLOC_153624 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_056079 XLOC_126448 XLOC_103679 XLOC_014322 XLOC_103815 XLOC_124877 XLOC_005831 XLOC_124587 XLOC_114188 XLOC_056098 XLOC_072644 XLOC_077234 XLOC_056075 XLOC_000643 XLOC_151888 XLOC_000141 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_05770 AATGCCACAACAGTTCCTAAAGAAGGCAGCAGCTCACTGCACATTTCCTCTTCACAGGCC Gene GeneID:616518|LOC616518:XM_002690575:252_cdna Constitutive 0 NULL GeneID:616518 10 GENE LOC616518 NULL similar to TCRA protein EMBV3_12333 CTCAATTCAGGAAGTGTGAACCGTACCAGGTAGAACATCAGGGACCCCAGAACCACACAT Gene BVV0102_130146 + 0 NULL GK000030.2:40133424-40143342 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246854 TCONS_00246856 TCONS_00246857 TCONS_00246855 1 XLOC_151138 Coding TCONS_00246857 XLOC_151138 Coding Coding MECP2 X:40135867-40196745 j TSS184987 10224 1 TCONS_00246857_3 498 3 0.8321040787161 0.00104481124233101 0.000651300926985374 0.000730696890984552 0.000368661464845982 1.43276266269612e-07 3.17813079657245e-08 0.000130487421694622 0.000229903680320375 2.31613224574925e-08 7.88528472622917e-75 1.12839908621924e-05 5.53820285407031e-12 0.000109760619778381 1.296741499096e-09 2.70744935326125e-05 0.000289776100240018 5.45563842520374e-10 1.95606344904323e-08 0.000386836602018142 0.000608715675056363 0.000596405351306478 1.62292002763672e-228 0.000119822755881682 1.70850041442121e-09 0.000484790542238606 1.98540630259352e-07 0.000236642341596894 1.88840664459622e-05 9.20246772015039e-06 4.86552632067308e-134 XM_005227695.1 MECP2 PREDICTED: Bos taurus methyl CpG binding protein 2 (Rett syndrome) (MECP2), transcript variant X1, mRNA. 0.0 1.806e+04 100.00 0.979460093896714 XM_005274681.1 MECP2 PREDICTED: Homo sapiens methyl CpG binding protein 2 (Rett syndrome) (MECP2), transcript variant X1, mRNA. 0.0 3189 83.15 0.294014084507042 TCONS_00246857_3 sp|P51608|MECP2_HUMAN MECP2_HUMAN Methyl-CpG-binding protein 2; 0.0 704 95.39 0.955823293172691 1 coding 0 0 0 0 -3.29604626119108 0.00371687760783104 -0.0038216454165616 0.9541367011695 GGGGGCGGGGCGCAGGCGCGCAGGTGCAGCTGTGCGCAAGCCGGCCGGGAGGGCGGGGCGCGACGTCGGCCGTGCGGGGTCTCGGCGTCGGCGGCGCGCGCGCTCCCTCCTCTCGGAGAGAGGGCTGTGGTAAAAGCCGTCCGGAAAATGGCCGCCGCCGCCGCTGCCGCGCCGAGCGGAGGAGGAGGAGGAGGCGAGGAGGAGAGACTGGAAGAAAAGTCCGAAGAGCAGGATCTCCAGGGCCTGAAGGACAAACCTTTGAAGTTCAAAAAGGTGAAGAAGGATAAGAAAGAAGACAAAGAGGGCAAGCATGAGCCCCTGCAGCCAGCAGCCCACCACTCTGCCGAGCCAGCAGAGGCCGGCAAAGCAGAGACCTCAGAAGGGTCAGGCTCGGCCCCAGCCGTGCCAGAAGCTTCTGCATCCCCCAAGCAGCGGCGCTCCATCATTCGTGATCGGGGCCCCATGTACGATGACCCCACTCTGCCGGAAGGTTGGACCCGAAAGCTTAAGCAAAGGAAATCTGGCCGCTCCGCTGGGAAGTATGATGTGTACTTGATCAATCCCCAGGGAAAAGCCTTTCGCTCTAAAGTGGAGTTGATTGCGTACTTCGAAAAGGTAGGCGACACCTCCCTGGACCCTAATGATTTTGACTTCACGGTAACCGGGAGAGGGAGCCCCTCCCGGCGAGAACAGAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGGCAGAGGTCGGGGACGCCCCAAAGGGAGTGGCACCACGAGACCCAAGGCAGCTGCGTCAGAGGGTGTGCAAGTGAAAAGGGTTCTGGAGAAAAGTCCTGGAAAGCTACTCGTCAAGATGCCTTTCCAAGCTGCGCCGGGCAGCAAGGCAGAAGGGGGTGGGGCCACCACCTCAGCCCAGGTCATGGTCATCAAGCGCCCCGGCCGGAAGCGAAAAGCGGAGGCCGACCCCCAGGCCATTCCCAAGAAACGAGGCCGAAAGCCGGGCAGTGTGGTTGCTGCCGCCACTGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCATCTATCCGGTCCGTTCAGGAGACCGTGCTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTGAGCATTGAGGTGAAGGAGGTAGTGAAGCCCCTGCTGGTGTCCACGCTCGGCGAGAAGAGCGGGAAGGGACTGAAGACCTGCAAGAGCCCAGGGCGGAAAAGCAAGGAGAGCAGTCCCAAGGGGCGCAGCGGCAGCGCCTCCTCGCCCCCCAAGAAGGAGCACCACCACCACCACCACCACGTGGAGCCCCCGAAGGCCCCCGCGCCGCTGCTCCTGCCCCCGCCCCCACCCCCGCCCGAGCCCCAGAGCTCCGAGGACCCTGCCAGCCCCCCTGAGCCCCAGGACTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGCCGAGAGCAGGCTCGCTGGAGAGCGATGGCTGCCCCAAGGAGCCTGCTAAGACTCAGCCCGCGCTCGCCACCGCGGCCCCGGCCACAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTGTCTCATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAGCTGACTTTACGCAGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCCGATTAACTGAAATAAAAAATATTTTTTTTTCTTTCAGTAAACTTAGAGTTTCGTGGCTTCAGGGTGGGAGTAGTTGGAGCATTGGGGATGTTTTTTTCTTATCGACAAGCACAGTCAGGTTGAAGACCTAACCAGGGCCAGAAGTAGCTTTGCACTTTTCTAAACTAGGCTCCTTCAACAAGGCTTGCTGCAGATACTACTGACCAGACAAGCTGTTGCCCAGGCTTCTTAGGGTGTGCCTGCACCTCCCTCCCACCCAGTCCCCCCCACGTGGTCACTAGGGACAGAGAGCACTTGAGAAGACACTCCTGGTTTGGGGGCCATCGGTACCCCAGTCTCAGCTCTCCTCTCCCCCCACACCCTGCCCAGCCTCGAGCTCCACCACCCCACCCTCCAGTCCCCCTTATGCCCACCCACGTCGGGACCAGGAGGTCCGAGGCAAGAGAGACAGTTGGATCCTTTAGAGATGGTGGAGACGGCCAGTGGCTCCAGCCCGTGTGATCCCACACATGGGGGCACACAGACGGCTTCCCACCACCCCCAACCCCAGATCGACCAGGACATTTCACAGGATGGGGACATAGCACCTGTTGGCCCCGGTTCTGGCCCAGCTAGGAGGGAGGCATCCTTTGAGCCCCCCTGGGTGTCGACTGGCCTGCGCCAGAGGCGACATTGGCCCAGGGCCGGCCTCCAGCGGGTAGCACTAGACAGAGGCCACCAAGGCCATGGGCCGAGGCCCCAGCAGGCTGGCCCAGGCTGCAGCCAGCGGAGTGCCGCAGGCCAGGCGGAAGGCATCCCTAGCTGCTCAGAGCAGTTGTGGCCACTAGTTCGAGCCTTAGTAGATGGGGCCAGGGGCCAGGGGGAAGGCAGAGGAAATGTTCTTCCAAAACTTTTCCAATTCTCAACTCCTTTAGGGACAGCTTAGAACTATTTGCACTATTGAGTCTTCATGTTCCCACTTCAAAACAAACCTGCTCTGCGAGCAACCTAGCGGGCTTGACTTGGCGACCCTTTGTCCCTCAGGCCACTAGACGTGACGGTGTTGACAACTACCTGGATCTGTATATACCTGCGCTTGTTTTCAAGTGGGCTCAGCACATAGGGTTCCCACGAAGCTCCGAAACTCTAAGTGTTTGCTGCAATTTATAAGGACTTCCTGATTGATTTCTCTCCTCTCCTTTGGTTTCTGTCTCCTTTCATTTCAGCCTTTTCATTTCTCCCCTTCCTCCCTCGTCCTCACTGCTCCCTTCTGTTCCAGGCAGCCGCAGTGCCCGACCGTACTTCGAGCCGACACTGGTCAGCTCAGGCCCCCAGAACTCCCCCACCCTTGGCCTTCCCGCCGTCCAGCCCAGCTCCCCCTGCCACCCATTTCTGAGCCCTGAGGAAGCCCCAGACTCCGCTGAATCCACCCAGCTCTAGTACCCCAGCCTCTCTGAGGGGCATGGGAGAGGCAAGATCTTGCTCTCCCAGGAGTCTCCTCCTTCGGTCAGACCCTGGATCCCAGGTCTCCTCAGCCTTCCCACTCAACGGCAGTGGGTAGGAGAAGTGGACCAAGATTGGGATTGCAGAGCCAAGGGCAGCACAGAGACCCGCTGTGGCCTGCCAGTGTCACGGAGTGGCCAAGCCCTGACCTTGGCCTGTGCAGGACCCGGCTAGGGCGGGTTAGTTGGGCCGGGCAGCAGGCAAAATGAGTGCAGATATCCCCTGCCACTCCTCTGAGCAGTAGTTCTCCTCTGCTGGGCCCTGTGCGGCCTTTGCTTGCTGGAGGCTGGTGGAAGGGGTTGGTACTTCACGCTTTTCCCCATCAGCACCAGGGGCTGTGGTGTTGGGGCATCGAGGCTTGGGCTTGTTGCGGGGTGTTCATTTGTCAGTTTCAATTCGAGACCCCGTGCTTTTACCCTCTGTTCAGGAAGTCCTTATCTAGCTGCATATCTTCATCATATTGGTATATCCTTTTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCAAACGAGACAGCAGTCTTAGGCTTCCAGAAACACCCACAAGCACGTCCCATGTGAGCTGCTGCCATGAACTGTCAAGTGCGTGTTGTCTCGTGTATTTCAGTTACTATCCCCCAGCTTTCCTCACTGCAGTGTAACCATGAAGGAGTGAAACATCTTAGAAACCATCTAGCACTTCCTTGCCAGTCCTTTAGTGATCAGGACCCCTAGTTGACAGTTCCAATCAGTAGCTTCAGAAAAAAAAATGAAACTGTGTCTCTCTCTCCCAGAACGGTTAAAAGCAAGGGAGTTTGCCCTGTTCTGTTTGTGGAGTTGTAGCTGCCCTTTCTAGCATTTTTGTATCCATTTCTTGATGCTGCAAAAGCAAGTCCCCCAACCAAACCCACTCTGCTGTCCACCTGCTGGGCTTCACTTCTGAGTCCTCCCCCAGGAAGGGATGGGAGTTGGAAGAGGGGGCATGTTCGTTGGGGTCCCTCTTCCTCCAAGGACAAAAGGCTCCTGGCACTCTCAGAGGACCCCTGTCCACATGAGCCCGCTCTCCAGCCCATTTGTCATGGAGGTGCCATCTGGTTTCCTGGGTCAGGTTTTGAGGCATTAATTAAACCAAATCCATAAAACGTGGCTCCTGGAACCAGTCTCCAAAGCTGACCTCTCCAGCAGCTTGGCACCATCTGGTCCTGGGCCAAGGAGAGCTGGGCCTGCCATGCCCCCCTTTGACCTGTAACAGTTGATTTTGGGGCTGACCGATGTGGTGGTCGAGAACACCGAATCTCAAGTGGCGTTTCCTTTCTGCCCAGCCTGACCTGCAGGCCCCTTGCTCCGCAGCTCCCGCCCCTAGAGTTTCAAGGCTATAGGTGGCACCTTAGGGTTTTCTCCCCCTTTGATCCACATTCCCTCTCCCCCAGATACAGGCATTATGAGCGAGTCACCTTTGGGCAGGGGCGCTGATGGTCCTGTACCACTTTGTCCTGGAGACAGGTGGACAGAAGGTTGGAGGGCAGGCCTAGCCTTGGAATTCTCACCAGCTATGTCCGGCCCAGTTGGGGAGTATGATGTTGATTCTGTGTGTACTTGAAGACCGCGAAGATTCAGGGGGCATCCCTTATAGACTGTGTCCAGAAGGCAGGAATTGATAAGACAGCTTTCAGATACCCAAGGGACTAGGTCTGTCACATTGGGTCTCCTTGCCCTGTGCCTGTCACTTGGCTGTCCTAACCCGTGTCGTTGCTGGCGTTGACACCACAGTGAGGCGTGGCCCCTGGGCCACAGCAAGGTCCAGTACATGTCCCTTCTGCACCGTAGTCCCTATCGAAAGGCACAGGAGACCCCCAGAAATGCCCTGCTCCCCCCCACCACTCCCCTCAGCTCCCTGGACAGTGGAAGCCACAGTGGTGGCCTGGGCATGCCGGCCACAGCCAGCACCTGACTTCTCTCCTGAGCCCCCATGCCATTGCTAGCAGCAGTCTGCTCAGTGGTGGTATGCCAGCCTAGAGGCCACGAGCAGTGGCGGTGGGACATGAAACAGCACCAGGTTGTCACCTGCCTCCCTGCCTGTCATTGCCGTGACGGCCATCATGAAGGAGGGTACTTAATAGCCACAAGCACGCTGCTATCTTTGGTGGAAGAGCAGTTTCCTTAGCTGACAGGACCTCTGGATTTGAAGTAACTTCTAACAAGCGGCGTGAGCCCAGGAGGGAACAGAGGGTGTAAAGGGAAGCCACCAGGTATGGCAGCCTGGATCTCGTGGAGCCTGGCAGTTGAGCTCTGTGCCTCCTCTCCAGAGTGTTCCTACCAGGCCCAACAAGGCCAGGGGAGGTCACAGGCATCAGCCCTAGCTCAGCGCAGCCATTTCTAGCGGGTTCATGGCCCCAAATTGTTTTTCTGATGTGAGTTGCCTATGTGGGTGGCCCAGACCATCCAGACCTCGGGGAAGTGAGTTCTCTCTAGAGCCCTGTGGGCATCAGCCTACTGACCCCCTGAGTACTGGCCAGTGCCTGGGGAGGGCTAGGGGCACAGGCATGTTGCCAGGCTCGTAGTGGAATCCCCGCTCTCGAGCCCGACAGCCCCGCCACGTGTTCCGGCTCTCAGTTGCTCTCTGCAAGGGCCCTATCTCAGCGCTCTGCTCTACTGGAGGAGTTTGTTGAGTGTTTTTGCTTCTTTCTCTTTTTGAATCTGTATCAATCTTTAGAAAACATAGCGGAATTATCAGAGCTCACTAGGATACTGCCTCACCCAGGGTCTAAAAGTTCCATGTTCAAGGGGAAAAAAAGGGAACACTGAAGCCCCTTGTCAACATTGCAGAAGGAAGACCTAGGAAACCTTGAGCAAGAAACTACATCCTGATTTTCTGAGTGAATAAGAGCAAGCTTTTGCCCAAAAAAGGCTGATCTAAGAGGACTTGGAGCCTGGCCTGCTGTGTGGCCAGTGCTGCAGGTGAAGGGGAATCCAGCCTGAAACTGCTGGGTCTGCGCCTTGGAGCCCTTGGGTCACTGGAGAGTCTATCTCTCTGTCTCTTTCTCTGGCTCTCAGGTAGCGGTCCCTGCAGGGAGACCTGCCTGTCTCGAAGCTACAGGAGCCCAGCTCCGGATGGGAAAGGGGGGCGCTCAGCAGAGAATTGTGAAGGCACGCAACCTCCTCACTACCTGACTTCACCTGTTCTTCCTCCTCTGTCATCTCCAGCGAGCCTACCCCAAATGCCGAGGTGTCAGGAAGAATTGGTTCGAATTAGGGCCCAGGCCACTAAGCAGGAGAAAGTGATGTCTCCTCCACAGCGTCTACCTGTGGTGTGGCATGCCCCTGAGGACAGTCCCTGGCTCTGCGCTCATTTGGGGCCTGGGGCCAAGGGAGGGCAGGGGAGAGAACCCTCATGGAAGGGGCTTCAGCTGGGGGTTTCCAAACATTGGGGAAACTTGCCTTGGTTCTGCCGGCCACCCCCTCGGTCACCTGTCTCCTTGAGTCCTGCTCAGCGGTGAGGGGAAAAGGCCACGAGGTTTGGCTCCTGCCCACTGATAGTCCCTCTCCCCACAGTGTCTGTGTGTCAAGTGACAAAGCTGTTCTTCCTGGTGACCCGGATTATATCCAGTATCTTCTAGACTATACGCATAGACCTGCTTGGTCTTTTCTCTCCTGGGCTTTTGTTTTGCTCTTTAGTTTTGCTTTTCCCTCTCCTGTCCCTTTTATTTAAATACACTGACTAGACACACAAAGCAGTTGAATTTTTATATATATATATATGTATATTGCACAGTTATAAACTCATTTTGCTTGTGGCTCCACACACACACACACACACACACACACACACACAAAGACCTGTTAAAATTATACCTGTTGCTTAATTACAATATTTCTGATAACCATAGCATAGGACAAGGGGAAATTTTAAAAAACCAAAAAAAAAGAAAAAAAAAAAACACAAACGAAGAAAACAAACAACAAAAAAAAAAACCTGACAAATCCGTCTGCTGGTCACTCGTGTCCAAGCAGAACCGTGGTCTTTCCTCGCTTCTTTCAAGGGCTTCCCAGTGCCGAGCGAAGGAGGCAGCTCCTGGGTTTCGCACTGTTTCTCCCAAGCTTGTGAGTGGGGCCCCAGGGCGCTGGTGTAGGCAGGACAGTTCGTTTCAGTGGGTGGATGCAAGCATGCTCCCTGGCTCTGGTGAAGCCCAGAATGTAGTTGGCACTGCCTGGGCCCCTTTGATCTCTGGGTGGGGCAGCTGGCGTTCATGGGGGTGACCTGCCCCCCCGACACCCTCCAGTGACCCAGAGTGATAGTGTGCAGACAGGCAGCAAGCCTCCCCACTGGTAGGGCCTGTCTCTGCCAAGTCTGGGGGCCGCAGGGGAGACGAAAGGCTGTGTCTCAATTCAGGAAGTGTGAACCGTACCAGGTAGAACATCAGGGACCCCAGAACCACACATGCGGTCCAGCGGGTCCCCTCCAGGAGGTAGCGAAGACTCCAGAAACGTTCCTTCCTCTTCCCCCACTGCCCCAATCCTACGAGTAATTGCATTTGCTTTTGTAATTCTTACTGAGCAATATCTGCTAGAGAGTTTAGCCGTAAGTTCTTTTTGATCATTTTTTAAGTAAGTAAAAACACCAAAAAAAATAATAATATCCAGAAACTTGTTCTTCCAAAGCAGAGAGCATTATAATCACCAGGGCCAAAAGCTTCCCTCCCCGCGTTATTACTTCTGAGGCCTACGTCCAAAAGAAACCCTTAGAGGCCCTTCAGGTGGCCAGGCACCACTCAGGCCCCTGGGAGGACCTGGGCCTGGGGGCTGGGCCCCACCCTCAGTTCAGTATTAGTGGTGGGTCCCTGCCTCTTCTCCTATCCAGCCTGGGCCAGGGCGGGCAGAGGAAGCCGCTGCGACCACTGCTGTCCAGCCTCTTGCAGATGGGTGTTGGCGCGTGTCCAGTTCTGCCCGAGATCTGAAGGCGGCACCGAATTAGCCTCAGCCGGTGACCTCTCACCCGGCCTGCCCCAGGCAGCAGGGCCCACCCAGTGCACTGTTCCTGGGTTGCTGGACGGTGGCATGGCAAAGGCTTGCAGAACTCAAAACCTGCTCCTTCCCTTGCTCCCAAGGCCTCCTTTTCCATTTATATTGTCACTGCTTCAATAACAGCCACTCCAGAGTCAGTAGTTGATGAATATATGACCAAATATCATCAGGACTGTTACTCGGTGTGCCGAGCCCTCTCCTCGCACGGGGCTCCTGTACCCGGACACTGTACCGTGTGCTGTGTTTGCGCTCCTCCCTTCCTCCACCCTCCCCTCGTCTCTCTGGGGTTGTTTCTGTTTGGGTTTGGTTTGGTTTTGAGTTCTCCTTTTGTGTTCCAAACATGAGCTTCTCTCTACTGGTCCTCTTAACTGTGGTGTTGAGGCTTCTATTTGTGTAATTTTCGGTGGGTGAAGGGAATTTTGCGAAGTAAATCTCTTCTGTGTTTGAACTGAAGTCTGTATTGTAACCATGTTTAAAGTAATTGTTCCAGAGACAAATGCTTCTAGACACCTTTTCTTTACCAACAAAAGAATTTGGAGGGAGGGGATGGTAACCAGAAGGAGAGGGGCTGTCCTCTTGCCCCAGGAGGGGGAGAGCCAAAGACAGGACCCCCTGCCCAGATCAGCCAGAAGCCACCCAAAGAAGTGACACCTAGAGCTGACAAAGTAAATAGCTGACATGCTGCCATTTGTGAAGTCAGAGCAAAACCAGGTTTTGGTCCACTCCCAGATTAGTAGCATCAGGATTATTTTTTTAAGGACAGACAAGGTTGACGTTCCTGCAAGGGGAGCCAGCCACATCTCGGCGGGAGAAGGTCGGGGTGGGCCTGCGGGGCAAGGCTCGGCCAGAGGGTGGGCATCTCCTTGGAGACCTCCACTGTGGCCACAGGTCAGGCTTGTGTGGACAGGGCATTATGATTCGGGGGGGGGGGCATTACCGTTCGGGATACCATCATCAAATCCACCCCGCCCCACAGTGCACGACACTAACATAACCTCTGGATTCCCCACTTTCCTGGATGAGGAGATGATGGTGGGGTCGGGGGGTGGTGCATGCCCTTGGCTGTCATCTGATCCCCAGTAAAATTTGGATGTGAGAAACCACCCCCCTTCTCGTTTCATGGCAAAACCCTATCCTCTTGAGTAGCCGTTACCTCCCAGACACTATTGAGGACTGACAAAACAGGGGTGGCCATGTGCTCCCTTAGCACCCGGGGTCGCCCCCTCTTCGAGGACAGTGCTGACCATTTGGGAATGGGGCTTAGGAGCGAGAAGAACCAAGCAGGGTCACCGCCCCCTCCTGAGTCGCAGGGACCCTGGTCACCCTGTGCAGAGGGAGCTGGCTCCAGCCCAGGAGGAAAAGGGCTGGAAAAGTGTGTGTGGGGTGCGGGGAGTCACCCAGGACAGACTTGGCTGGAGATGATCTCCAAAAGCCCTCTATCGCATTCACCTTCAGTTTTTGTGTTTTGGGACAATTACTTTAGAAAACTTAAGTAGGTCGTTTTAAAAACAAAAAATATTGATTGCTTTTTTGTAGTGTTCAAAAAAAGGTTCTTTGTGTATAGCCAAATGACTGAAAGCACTGATATATTTAAAAACAAAAGGCAATTTATTAAGGAAATTTGTACCATTTCAGTAAACCTGTCTGAATGTACCTGTATACGTTTCAAAAACACCCCCCACTGAATCCCTGTAACCTATTTATTATATAAAGAGTTTGCCTTATAAATTTACATAAAAATGTCCGTTTGTGTCTTTTGTTGTAAAACCAAGTGATTTTTTCATAAGGTTCTTTTACTATTTGAAAAGATGGGCAGCACGCAGTTTTATTTTATTTTTGTAAGTTTTTTAATACGTGTGAAAGCCAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTCGCACCTTTTGTTGGGAAGTACTGTATCCTGTGCTGTTAGCATTCTCGATAAATCTCTCTGTGAAAGTGA EMBV3_04260 AACAGTTCAAAACAGCCTGGGATGGAGCCAAGCTAATCACTGAACCTACAGAAATCATGG Gene GeneID:515190|CAP2:NM_001098979:83_cdna Constitutive 0 NULL GeneID:515190 23 GENE CAP2 MGC152504 CAP, adenylate cyclase-associated protein, 2 (yeast) EMBV3_37103 CAGGAGAAAAGACAATGGCATCACACCCTCTAACTGAACCTATGAATCCGAGCGGCTGTG Gene BVT0102_044179 + 0 NULL GK000005.2:103779251-103841289 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01485 CTCCAGTGTCTCCAGTACCAGTTTTACCAGCCAATCAACAACGCTGACTTCATAGTGCCT Variant GeneID:506115|CTDSP2:NM_001045935:944_cdna 530^631 1 EMBV3_09336 GeneID:506115 5 GENE CTDSP2 MGC128840 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 EMBV3_38500 GAATTTAAAGTGCTGGAGGACTCGTGGACTGTGGTCTCCTTGGACAATCAAAGGTCTGCC Gene GeneID:533042|MAP1D:NM_001046342:22_cdna Constitutive 0 NULL GeneID:533042 2 GENE MAP1D MGC137999 methionine aminopeptidase 1D EMBV3_21811 GGAGTGGATGCTCTCAGCAGTGTTTAGTACTTTTCTGCCTTCTGGTTCCTGTGCATAGCC Gene GeneID:507476|PGK1:NM_001034299:4_cdna Constitutive 0 NULL GeneID:507476 X GENE PGK1 MGC127284 phosphoglycerate kinase 1 EMBV3_10245 CTCAGTATCTAGAGAGGATTGTCAGAATATTCATGATTCACGTCTTGAAATCTTGATTCT Gene GeneID:541234|MYO5A:XM_002690962:336_cdna Constitutive 2 NULL GeneID:541234 10 GENE MYO5A NULL myosin VA (heavy chain 12, myoxin) EMBV3_24326 TTAATGAATTTGAGATCGAGCAGCACCAGGAATGTGCCTACGACCACCTGGAACTGTACG Gene GeneID:504975|TLL2:XM_002698408:338_cdna Constitutive 0 NULL GeneID:504975 26 GENE TLL2 NULL tolloid-like 2 EMBV3_26941 AGGGCTGAAGTGAAACAGCGTCAAGCCAGAAGTGACTTTGCAGCCTTTCTTGTGGGGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31597 AAATGGTAATCGTGTTTCACCTAGCCATACTCCACCACAGGCTAATGCTGCCCAGCCCTC Gene GeneID:537349|DZIP3:NM_001076092:101_cdna UTR3_Alt 4 NULL GeneID:537349 1 GENE DZIP3 MGC137859 DAZ interacting protein 3, zinc finger EMBV3_10307 ATCTCTCCTGCTGGGCAAGGAATGGGGCCTCCTGGGCCTTGTCTTTAGTCCTATCTTTAA Gene BVV0101_081494 + 1 EMBV3_39145 GK000004.2:108471247-108488347 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185276 TCONS_00185274 TCONS_00185275 1 XLOC_111547 Coding TCONS_00185276 XLOC_111547 Coding Coding NOBOX 4:108487390-108495206 j TSS137782 2725 1 TCONS_00185276_4 565 0.0697247706422018 8 0.65233525271913 0.000534562725444593 0.000510075480439488 0.000324730844687373 0.000562752371660977 4.05571686875887e-05 1.47138231751182e-05 5.33299916221707e-05 0.000409259990416586 2.4414073231923e-05 8.58835655677219e-05 1.06521783744516e-10 2.63489098547635e-10 0.000100220226508319 1.57255749230311e-05 1.89418798409813e-05 7.80822569436842e-21 0 0 0.000184485127834059 0.000636605123324229 3.80051961927178e-05 8.75014615115255e-34 5.41460139102831e-10 0 0.000673533940925758 0.000545415238468453 0.000560058281751396 1.10620974914229e-16 1.29585230265939e-10 4.63525887170518e-14 XM_606837.7 NOBOX PREDICTED: Bos taurus NOBOX oogenesis homeobox (NOBOX), mRNA. 0.0 3532 100.00 0.718165137614679 NM_001080413.3 NOBOX Homo sapiens NOBOX oogenesis homeobox (NOBOX), mRNA. 1e-170 605 72.80 0.372110091743119 TCONS_00185276_4 sp|O60393|NOBOX_HUMAN NOBOX_HUMAN Homeobox protein NOBOX; 0.0 616 59.97 0.978761061946903 1 coding 1 0 0 1 -1.57645391252136 0.0237683268973722 -0.00240265890075606 0.959098602237595 CACACCTGCCCGCGCGCGAGGCTTCTTTAGGCGGCGGGCAGGCGGGCGGCCCCGTGCGGGAGTCCAGGCCATGGAGCCCACCCGGGAGCGCGGCCCGGAGTTGCGGGGCCAGGGGGGTGTCCCTGCTGCCAGGCTGGAGGAGGAGGAGGAAGCCCTGCAGAGGTCAGCCCCCCACACTCAGGATGCCCCAGGCAAGGACGTGCCTATTTCCTGCACCATCTACGGGGAGAAGCGGCCGTCAGAGGCCCCTGGGGAAGGGACTGGGCCTATGAAGGCCTGCCAGCGCCCCAGCCCAGGAGCTCTCCACGAAGACAGGAGCCTGGCCTCGCCTAGACCCCAGCCTCAAGGGCAAGGGCCTCCCTTCCCGGGGACAGAGGGCAGGCTGGGGAAGAGGCCCTCTTCTCCAGCCACCGGCAAGCAGAAGAAGCCTAGGGATGTGGGTCCGGCCTCGACGGCATCTCCCAGCAGCGTTAACCCGGCTCGGGCCACGTACAACCCAGGGCCTTGTGGGTTAGGCCGGGGGTCCTGCCATGTGGCCAACCTCCTCAACACACTGGCCCAGAAGAACCAAAACCTGGACCAGGAGAAGAGGTCCCCGGAAGTGACCTGCCAGGTCCGGAAGAAGACTCGCACCCTGTACCGCTCGGACCAGCTGGAGGAGCTAGAAAGGCTCTTCCAAGATGACCACTATCCAGACAGCGATAAGCGCCGTGAGATTGCCCAGACAGTGGGGGTCACCCCCCAGCGCATCATGGTGTGGTTCCAGAATCGCCGGGCCAAGTGGCGAAAAATGAATGGGAAGGAGAGTAAGGACGCACCTGCCGGTCCCGCCCTTACCCCAGCCCCCGCCAGCAACCAATGCAGCTCTGTGGCCGAGCTGCCACCTACCGAGTCCACGATGCTGGAGCCTGGGACCCTCCCTCAGGATTCCCTTCCAGAGCCGTCCATGCTGCTGACATCTGACCAGACTCTGGGCCCAAACCTGCAGAATGAGGGCCCCCAGAGAAGGCCTGTGACCCCCCCACTCTTCAGCCCCCCACCTGTCCGAAGAGCCAACCTTCCCTTTCCCCTCGGCCCTGTGCATGCCCCCCAGCTGATGCCACTGCTGCTGGACACCCTGGGCAGTGACAGCAGCCACAAGGATGGCCCTTGTGGGTTGTGGGGAACAAGCATCACTCCACCCCCTGCCTGCTCATACTTAGAGGATCTGGAACTCCAGGAGTACCAACCCAGCAGCAGCCAGCCAGGATCGTTCCCCTTCTCCCAGGGGCCACAGACCCAGTTCTTCCAACACCCACAGCCCCAGTTTCCATACCTGCACCCCTTCCCTTTGCCCAGCTCGCTGACTCCACCACTGCCCGAAGACCCTCTCTTTGCCTTGTCCTGTGGCCCCGGCGGGGGCTCATCCCAGGGCTATTTCCCAGGCCCTCCGTCGGGGCCCGTCCTGCTGCAGCCGCCGGCCGGGAATGTGGGTACGGTGCCCTGGGCCGACCCCTGCCTGCCAGACTTGCCATTCCCCAGTGCCTTCTGCCCGCAGTCTCTGGGGGGCCCCCCGGGAGGGGACGGCTGCTTCCTGGACCTGTTTGCTGCCCCCTACGCACAGGCTTCAGGTAGGCTGCCTTCCCCGGGCCTCACCCAGATGCCCGAGAGCACCCCACCTGCAGCAGGAAAAGCCCCGCTCAGCCAGGCCCAGGAGGAACCACCGGCTGCCCCCGGGGAGCGGCCCCCGGCCCCCGAGGAAGAAGACAAGAGTGGCCATGGCCCCTAGTCATGGAGCCGAAGAACCAAGAGGCCGTCCTGCCGGAGATGGCTGGAGCACCCAGAGGAGACAGGGCTCGAAGTTGAAGGAAAGACTGGACTCCAGGGCTCATTTTGCCAAATGCTGACTTGAGGAGGAGGAGGCCTGGACCACCCGTCCTTCCCCCACAGCTCCGAATGGTGGTCCTGGAGAAATGGAGTGGGGCCGTGTCGCCTCTGACGGTTGCTTCCGTTTATGTTATTTGCTCTCCTTGCTCCACAGCCGCTCCAGTGGCCACCATAAGCAGTAAACTGCCTCCTCTTGGGTTTCTCTCTCTGTAGTGATGTGTCTCCCTTCTCACGCTAGTGAAGACCCCCCCTGCCCTTCATTGCCACCCACTCAGCTGGGCAGCTGTGTACTGAGAGGCTCAGGAGGGACTGACCCTCTGGGGCAGGATCGTGTGAGCCTGGCATCCTTCTGGGCCCCATCTCTCCTGCTGGGCAAGGAATGGGGCCTCCTGGGCCTTGTCTTTAGTCCTATCTTTAAACCATGTTCTCGTCTCAAACCCAGAAGTGAGCCTGAACAAACCTGAGCCTGGGACTTTTTCTGCAATTTGGGCCCTGCAGGGATGGAAGCTCTCAGCCCGTAAAGAATCTGCCTGCAAGGCAGGAGACCGGGGTTTGATCCCTGGGTAGGGAAGATTTCCCCCAGAGAAGGGAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCAGGAATTTGCAAAGTGTTGGACATGACTGATGCAACTAACTCTTAACTAGGGATAGGATGATGAGAGAAGCTCAAGGCTGTTTAGGCCAAGTCTCTAGAATTGTGAACCATGATTTATTTTCCCAAAGCTCTTCTTTTTCTGGGTTGAGAAGGGATTGGGTAGGAATGAGGGGTGGGAAGACCAAGAAGAGGATGCTCT EMBV3_22338 AGGCAGCATTTTGGTCCCTGCTCCTGCCCAGAGTAAAAACAGCCTGAAAAATCCCATGCA Gene GeneID:530101|GFPT2:NM_001076883:31_cdna Constitutive 0 NULL GeneID:530101 7 GENE GFPT2 MGC142725 glutamine-fructose-6-phosphate transaminase 2 EMBV3_13085 ATTTCTGCTGAACCATGACCCCTACCCCCTCCTCCGGTCAGTCTCCCCCACCTTATTTAT Gene GeneID:522714|IHH:NM_001076870:92_cdna Constitutive 0 NULL GeneID:522714 2 GENE IHH MGC151515 Indian hedgehog homolog (Drosophila) EMBV3_13573 AGCAACCCCACTCTTTCTTGGTGAAGTCCACAGAGGCGTCCTTGAATGCTACCTGTTCCT Gene BVT0102_136131 - 1 EMBV3_41038 GK000028.2:46030709-46051868 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159860 TCONS_00159859 TCONS_00159864 TCONS_00159858 TCONS_00159863 TCONS_00159866 1 XLOC_097523 Coding TCONS_00159860 XLOC_097523 Coding Coding LOC100848535 28:46041375-46055913 j TSS119707 4583 1 TCONS_00159860_4 404 0.179358498799913 5 0.685079452431726 0.000219723928601952 0.000300376662200672 0.000235849036038652 8.05035528470597e-05 0.000637405320431858 6.80318297383857e-16 0.000365423236862245 8.2004419357351e-05 0.000902915265047564 8.69089725375679e-05 8.2196697595549e-13 3.16985411863525e-13 6.96373346531865e-05 0.000224153637311277 1.33786353511636e-15 7.97016506275654e-06 3.24007202592335e-50 6.75054090668699e-10 0.000283087247315968 9.27517101478542e-05 9.06478720818986e-19 9.70072461371819e-10 2.34501079802907e-12 0.000383757642578441 0.000122223032239574 0.000455509935667513 5.19450482232569e-12 2.37751388841986e-15 0.000129969475927254 2.56773316297379e-22 XM_005226640.1 ZNF239 PREDICTED: Bos taurus zinc finger protein 239 (ZNF239), mRNA. 0.0 7362 99.93 0.893301331005891 NM_005674.2 ZNF239 Homo sapiens zinc finger protein 239 (ZNF239), transcript variant 0.0 1613 79.65 0.401047348898102 TCONS_00159860_4 sp|Q16600|ZN239_HUMAN ZN239_HUMAN Zinc finger protein 239; 0.0 645 79.26 0.995049504950495 7 coding 1 0 1 1 0.0593493760429029 0.764244714819038 -0.00689745932050798 0.893805127601854 ATCACGAGTCCTGCGCTTCCAGGTATCAGATTCCACGTGAGAGGCGAGAAAGGCCTGGCAAGCAGCGCAGCCTGCGCAGCCGGTGGAGAGGCGTCTGGCGTTTGAGTCGTGGGAGTGTCGCCGGGAATCTGTCCTTCCTGAAAGGAGAAAATGACCAAGTTCCAGGAACAGGTAGCATTCAAGGACGCCTCTGTGGACTTCACCAAGAAAGAGTGGGGTTGCTGGACTCTATTGAGAGGAAACTGCACAGAGCTGTGATGCTGGAGAACTACAGCCACTTGGTCTCAGTGGTCCTATGTTCGCAGCATGATCCTGGAGTGCACCACCCTACTGATGCTCAGCCCTTTCCTGGTGCACGTGTGTTCAGCTCTCAGGGGACACCTCTGCTGACTGGGCTTGGCATGAATCTAGTAAGAATCCAGATGGAGACTTGAATGAAAATTTTGTGGAAAATGAAGATAAAGTACTTATGTTATCTATTACCTCTAGAGCCTTCCTGCTGGCAAATTTTGGAAGAGGTGGCTTAGTACAGTAACGAGGAGTCAGAATTAAATTGTGAATATTCACAGGGAGGTGTAAGTAACCCTGAACTGGATCTTTCTACTTGTCAGAAGTGGAGAAAAGTATCTTCTAATATTTCCAGGAACCACAAGCAGTGTGGTGACTCTTCAGAGTGATGATTTAGAAAAACATGGAGAGTGAAGACTATCCATCTTTGAAAGTCCCAATCCAGATGGCCACCCAGGACTCCTCATTCTGTAAGAAAGAGCCCCAGGATCCTCAGGAAAGCAAAAGTCTGTTTGTACCTGAAGAAAGCACTGAGAGGAAACTGACAGGGGCAAAAAGTCCTCCCATCGAGCATTGTTCAGAGAACCTTCAAGATAAACTTGTGGCTGATGTAAAAGAAGTAGTCTTGCCATTGCTCAAAGGGGAGACAGTCTGCCATACTGGCCAGTTGAAAGAATCCTTGGAGCCCTTTGACTATAACCACAAAGACGTTTGTGGTTGGAAATCTCGGGTGGCCAGTCATCATTATCAGAGAGCTCATACAGAGGAGAAGCCCTGTAGCCATCAAGACTGTGGGAAAACATGTACCGCCAGCCCAGGTGGTCACCCTGGTGAGAAAATCCGCCCTTCACAGAAAGTATTCAAATGTAGTCAGTGTGGCAGGGACTTCAGGGAGCGCTCAGATCTAGTCCTTCATCAGAGGGACCACACTGAAGAAAAGCCCTACAGATGTGATCAGTGTGGGAAGGGCTTCACAAGGAGCTCAAGTCTCCTCATCCACCGTGAAGTCCACGCAGATGAGAAGCCTTATAAGTGCGATAAGTGTGGAAAGGGCTTCACCAGGAGTTCAAGTCTGCTCATTCATCACTCAGTCCACACAGGTGAGAAGCCTTATAAATGCGACAAGTGCGGGAAGGGCTTTACTCAGAGCTCCAAACTGCACATCCACCAGCGAGTGCACACTGGCGAGAAGCCCTACGAGTGTGGGGAGTGCGGCATGAGCTTCAGTCAGCGCTCCAACCTGCACATCCACCAGCGCATCCACACAGGGGAGAGGCCCTACAAGTGTGGGGAGTGCGGAAAGGGCTTCAGTCAGAGCTCAAACCTTCACATCCACCGCTGTTCACACACAGGGGAGAAGCCTTACCAGTGCTACGACTGCGGGAAGGGCTTCAGCCAGAGCTCAGACCTCCGCATCCACCTGAGAGTCCACACTGGGGAGAAGCCCTATCACTGTGGCAAGTGTGGGAAGGGCTTCAGCCAGAGCTCCAAACTCCTCATCCACCAGAGAGTCCACACTGGAGAGAAGCCCTACGAGTGCAACAAATGTGGGAAGGGCTTCAGCCAGAGCTCCAACCTCCACATCCACCAGCGGGTCCACAGGAAAGATCCCCATTAAATGAGGTCTTCAATCACATGCTCTTACTTCAAAGACTTCAGTATTTCTAACATCACTCTTACTTTCACAGTCTCAGGATATAGTAAGAGTTATTCAGATATGTTCCCTCACTGAAAGTCATTCACTCAAGGTATTTAAGTACCAAGCACTTTGTTATGCTACACAGTGAATTGATTGTTCTTGTTGCTTAGATAGGCAGAGCGAAAACGTCTGTACTTTGTCATTCACCCAGTGTTACTAGAGCTACATATCCTACCCAGCATTTCTAAGTGCAAGAAGCTTATATTTGTCTAAGCAGAACACGTTGACTTTGTTCACACTCGCTGAGAATCTGGGACTTTGGCTTTCTCTTCAAATCGTGTGCCTTGTGTTTTTCATATTTCCTTCCAGTCCTGAGTAGCCCTCTTTAAACTATGATTGCACAATATGTTTTAATATTTGCTATAACCCCCAAAAGTCATTTGCTTTGACAACATTGTTACTGAGCCACACTTGGGTCTTCTTGGCCAAGCAGAGTAAAGCCAATCTACTGACACTGGGTTGTAAAGGAAGTGCACCATTTATTGCAGGGCACCAAAGGAGTCCAAGAAGCTGGTGCTCATCAGACCCAAACTGATGGCTTTCAGAGAAACATAAGGTGAGGAACAGGGGACTGTGGGGTGCATGATCAGCTCATGGACATTCTTCTCATTGGTTGATGGTGAGGCAATTAAGAGTCAATATCATCAATCTTCTGTTTCTAACCCATCTGGGGTCTGCTTGCTTATGGGCAGCAAACAACTTCTTGCATCTGGTGGCAGTTTCAGTGTCTGCAAAACAGCTCAAAGGACATGGCTCAGAATATTATCTATATTCTAGAGGAATTACAGGTCCTTGCTTCACTTAATGGCTAAACGATTATTGTTTGTTTTGCTTGGCTTTTTCCCTTTCTTTCTGTATTTTCTCTCTTCTCTGATTAAATTTACGCTTTGGAACTTGAGGAAGGCTTGGAGAGTATGTTTTGAGACGACAAGGCTTAAAATATGCACTCTATCATACATAATTCAATTGGGGTGTGGAGCTAGGATACCTCAGAGGGTTAAGGATCATCTCCTAGAAGGTAAAACAATAAGCTTGTAAAATAGTTGAGAGAAAATTGTTTTTTAGTGAATACATAAGTAAAGCAGAAGTTAACTATACAATGGCCTAATTGCAACCCTGATTTTCTAAACAGTGATTCCCCAAGTGAGGCTTAAGAGGCTCCCTAGTCACCTATAGTTTAGCTACTCACCAGTGACTAGAATCTGTACATGAAAAAACGGTGGGGGATATAGATGCAGTATTTATTACCTTGAGGAGCTGGGGTTATAACTGGTACATCCTGATCAAAGTTAACCTGAAACAGTTAACTGGACATGGATAACAGGAAAGTGACATGTTAAATTTAGAGGAAATGTAGCTAATGTCTAATAAGAAATGGAGGACTTGCTTTCCTTCAAGAGGCAATCCCAGAATATTTGACTCCAACTCAAAGGAGCCCACATAGAATGATTAGGGTAGTGACTGAGCATCTGTGCTTTGGCATTGCATAATACCCTCACTAGTTTGGATACCCTAAGATGGTATCACAACTGATGTGATTCTGCTTTGGTGAGTGCTAGAATTATGAACCCTCCCAGTTCCTCCTGGCCTCATAAGATTATATGTGAACATCTCTTCTGGATTTGACTCTTATTTGTCACATGTGTCTTCTAATTGGCTGATATATATACTCTGTTTGGGACTTAGAGCCAAATATGATCATAAGAATCCATGTGTAGTGAGTCCCGAGAGTAGATCTATGAGTCCAGAGAGCAGATCTAAAGTCCAAGTCTCAAATGATTATAAACTAGCCTGTTTTCCAAGTCTCCTTTTATACATACATTAATTTAGCAATGTTTTTAACTCTGTTTAGCTTTTATTGTTCTCTTTTAAGCATTAGCTTTCTTAAAAAATTGAAATGTGGTCAGAGTCCTTGGGAAGCATTTTGCTGATTGTGGTAAGGAAGTTTGGAGGGAAAGTCAGAAAAAGGAACTTGTGCATGAAAATGCAGGAAAAGGAGCCTTCCTGATGGCTCAGTGATAGAGAATCCACCTGCCAATGCAGGAGACATAAATTCAATCCCTGATCTGAAAATATCCCACATGGCTTGAACCAACTAAGCCTGTGCTCTAGAGCCCAGGAGCCCCAGCTACTGAGCCCACAACTGCTGAAGCCTGCATGCCCTATTGCCTGTGTTCTGCAACAAGAGAAGCCACAGCAAATGAGGAACCTTCGAACTGCAACCAAAGAGTAGCCTCTACTCACTGCAACTAGAGAAAAGCCCACACAGCAATGAAGACCCAGCACAGCCAAAAGTAAAGAAAATTATTTTAAAAAGAAAATGCAGGAAGAACAGGGCATGTCTCACATTTCATGAAGTCCTAAAGATGCCATAGATTGACAAAGAGAAAACACTTCGTTAATTTTTTAAGACATCTCAACTTCAGACATGTGAAAATGAAAAAAAAAAAAAAAAAACGTGTTGCAAAATGGTTCTTTTTCAGAATTCAAGGGTTGTCCTAAGATTGGTCCTTTACTGGTACCTGAACAAAGACCTTTGGAAAATCTCAATAATTGTATTTGATTGATAATTCCATCACAAATTTGGCAAAGAATC EMBV3_15889 GGCAAATGGATGAATTCTAGGATGGTAGGCAAAATTCTGTTTCGTAACTCAGGTAGTAGC Gene BVV0102_184640 + 0 NULL GK000007.2:105045005-105359566 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02384 CACCGCAGATCACGCTGGTCCCAAGTTTGACATCGATATGCTGGTTTCACTTCTGAGGCA Gene GeneID:509253|MGC152190:NM_001075398:8_cdna Constitutive 2 NULL GeneID:509253 4 GENE MGC152190 NULL hypothetical LOC509253 EMBV3_15474 AGTAGGGTAAGGAATGCACCCAACGGGGATAGACCTCTTTAGAAGGTCAAAGGGCAAAGC Gene GeneID:538566|HS6ST3:XM_002691960:55_cdna Constitutive 0 NULL GeneID:538566 12 GENE HS6ST3 NULL heparan sulfate 6-O-sulfotransferase 3 EMBV3_41659 AAATAATCTCAGGACTTCTTTCCCTGCCACTCCACCTGGCAGCACCTCGGTCTGTGCAGC Gene BVV0102_157986 + 0 NULL GK000005.2:285088-356747 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196818 1 XLOC_118483 NonCoding TCONS_00196818 XLOC_118483 NonCoding NonCoding - 5:287306-288077 - TSS146386 771 2 TCONS_00196818_2 54 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000976299960317286 0 0 0 0 0 4.34878823475861e-06 0 0 0 0 0 0 XM_005199572.1 LOC522322 PREDICTED: Bos taurus ankyrin repeat domain-containing protein 26-like (LOC522322), transcript variant X2, mRNA. 0.0 924 94.33 0.77431906614786 0 noncoding 0 0 0 0 -0.196054366146493 0.257415432251903 0.0344133026186366 0.506737536265345 AGAAGCTTACTTTGAACACATCATTTAGAAACACTGTTGATAAAGTTATCCTTTTGATAAAAATCTCTTAAGAAATGTCTGTTTTTGTTTTGATACAGAGACTTATCACCTCTGTACACTTGGTGTATTTATACATATTTTAAGGACATTGTGAAACAGTATTGTTTACATGTAGGTCAAAGAACAAATTAATTACGTGAACGAACTGGATGACTTAACTCAGTCGTCTGAGACTGTTTCTGATGATGGTGACGTGCTTTACTCTACGAATTCCACGTTGCATAGAACCTCTCAACGTGGGGTGTAAAGGTAGGACGGCAGTGTAAATGTTAACGGAAAGCCTGTCTGTGTATAGAGGAGTGATATATGCACACCTTGTCAGTACTGCTCTAGAGCCAGGGATATGCTACACTGCTGTGCATCTCAGAAGTTTGTTTTGCATTAAAAGGACATGAAAGTGAGTGTATACTCTGAGCCACAGGCCTATGATACTCTCACTCTCTGTACCTTCTGTTGACTCTTCTTCTTTCCTGTGCCTTCACCCACGATCAGGTCAGCATCATTTTCCTCCTAGAGTAACTGAAATAATCTCAGGACTTCTTTCCCTGCCACTCCACCTGGCAGCACCTCGGTCTGTGCAGCAACTGTAATTATTGACTATTTTTAAACATTCAGGTCTCATCATGCTACCCCCTTGCTTCAAGCCTAACTGTTGCCTCTCTTTGCTGGGTGGTTAAAGGTCACAATTGTTTGGTTCCATCTGGTTTTAGT TCONS_00190694 . 3' 2220 TCONS_00190694 . 3' 2990 EMBV3_12649 CCACAAACCGTCGCGATCGCATTAAATCCTGCAGTTGTTGTAACACAGTAAGACCATAGC Gene BVT0102_180712 + 0 NULL GK000017.2:8891728-9742221 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037838 TCONS_00233184 TCONS_00218885 TCONS_00109063 4 XLOC_021667 XLOC_142666 XLOC_132204 XLOC_064968 Coding TCONS_00218885 XLOC_132204 NonCoding NonCoding - 7:10128477-10129746 - TSS162883 1269 2 TCONS_00218885_2 36 0.940898345153664 1 0 3.5738614482064e-06 0 0 0 3.8906132586167e-07 1.15883759786575e-06 8.7732549526146e-07 0 3.52330952855172e-06 0.00013164185747269 6.82175791047059e-05 0.000239342326857858 3.13364371722407e-05 0.000118263960939489 4.1416580641957e-05 0.0402028128599499 0.0132570802079862 0.0273037195919152 2.11906793639353e-06 0 3.98703147195361e-07 0.00784279868617422 0.0106058797808052 0.0193842245070306 0 0 0 0.000713639753476594 0.000280669329084988 0.00164464512407208 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 1009 89.88 0.574468085106383 NM_002736.2 PRKAR2B Homo sapiens protein kinase, cAMP-dependent, regulatory, type II, beta (PRKAR2B), mRNA. 5e-06 57.2 84.31 0.0394011032308905 0 noncoding 0 0 0 0 0.0770435826779018 0.678435328218526 0.014242223892218 0.756893739652363 AGCTGCTCCAGTGGCGGTAAAATCCAGTCGAGAGTGTTCCAAGGTCTGTATTTGATTATGAAGTTTCCCTAAGTCAGGCCAATATCAGAACTGTTCCAAACACCTGAGATATGATTTTTAATCTTTTCCCATTCATAATCTGTCTCGTTTACCTTCAAAGATGTCACGCATATCCACCTGTAATCAGCGTGGCACGTCAAAACCATCTTCACCTTTAAAGCCTGTAACTCAATCCCAATATGCATAATTGCTTCTTCTAAGGCGTCTACTCTTCATCTCTAATTTCCTATCTATAGCTTCCTGTGTTGCTAGAGTTAAAGAAACAATTTTAGACATGGTATCAACATATTGGGCAGTATGCACTTGTTGAGTCAATGATACTGCTGCCGCAGTAACAGAAGTAATTGTTGCTATCAAAGCTGATATTCCTAGGATAAGCAAGACCACAAACCGTCGCGATCGCATTAAATCCTGCAGTTGTTGTAACACAGTAAGACCATAGCTATCATATAGGCACCATAAGATAGGATGGGCATTGTAACACCACAAAGGAGCAAACATTACATTGAGGGTTTAAACAAGATGAAAGCATACATTGTTCACAAGTCACTACGTTAGGTCCACCTGAATAATTCATGCCTACATTAAGTTTGTTGGAGTCATTAGTAAAAAGGAAAACATAAGGCAAGGGTGGATAAGCTAAAACAGAATAAGTAGAATTATTTTCTGGTTGGAGTTCACGCTGCAGCTGCCCTGTCAGTCTCGCCGGGATCTCGATGTTTATCTTGTCTCCCCTGCCGGTGGGCTCCTCTTTTGTGATCGAAGCAATGGGGGAACTGGATGTCTGGGGGTCTGCAACATGGAGAATCAACCTGTCCCGGATCTAAATTGGAGAATTTGCATCCTGTGGAAAAATACAAGCACATCCTCGACCGCTAGTTAATAATGGGTCAGGACCCTTCCATTGTCCTGAGAGCAGGTCCTTCCATTTGACCAACGGCTTTGTATTTGTTGTTCCGGGCACCAATGGCGAAGCATTGCAGTAGTTCCAGCCTAAACGGCATTTAAAATATTTATTACAAAAAGAGCAAGTTGCAAGATTTGATGGGGAGAGCTATACTTAAACTCCCCTTCTTTTAATTTTTGAATTTGAAGCTTTAATGTTTGATGTGCTCTTTCCACAATGGCTTGTCCCCGGGGATTATAAGGGATGCCTGTATTGTGTTTAATTTGAAACTGTAAACAAAATTCCTGAAAAGACTTAGAAAN TCONS_00211744 . 5' 10947 TCONS_00211744 . 5' 10947 EMBV3_37033 CACCTTTACTCGAAGTCCCCACTCCAAGCACCTTTTCTTACCAACTCAGAGCTCCCCTTC Gene GeneID:281939|MYOZ1:NM_174397:221_cdna Constitutive 0 NULL GeneID:281939 28 GENE MYOZ1 MGC143329 myozenin 1 EMBV3_07002 GGTGGTGCCCAGGCTTCCTACATAAACCCAGTTTGCTGTGAACCTTCAGACCGGCTATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19498 GCATTGGCCCTAAGTCTGAATTCTGGGGAGACCTGTGGAAACAGCAGATCGCCTTTATAG Gene BVV0102_161873 + 0 NULL GK000001.2:146735100-146765801 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002510 TCONS_00002517 TCONS_00002511 TCONS_00002513 TCONS_00002512 TCONS_00002519 TCONS_00002516 TCONS_00002515 TCONS_00002514 1 XLOC_000630 Coding TCONS_00002511 XLOC_000630 Coding Coding AGPAT3 1:146650360-146740145 j TSS1291 6498 1 TCONS_00002511_4 376 10 0.927737681546823 0.00121211111960275 0.00017884495055786 7.39935208066086e-05 2.56574661523464e-18 0.000478850208778943 0.000166022101918335 0.000223927712612501 6.08194997377961e-05 8.19358661276273e-05 1.37398209166945e-05 2.74717428929806e-05 1.17049650249228e-15 3.15562116593353e-20 9.03738510275495e-06 1.58242493998163e-05 0.0025032400591659 4.91965479952421e-05 0.000845578001741929 2.48065523404794e-20 5.35662188039804e-05 8.1745953365539e-17 3.38950245032615e-13 7.23098493524546e-05 4.0660912915769e-05 0.000729600999161807 1.41781035617277e-20 0.000239258500380564 5.89303211097936e-06 1.31767119603997e-12 5.95319503829594e-11 NM_001038046.1 AGPAT3 Bos taurus 1-acylglycerol-3-phosphate O-acyltransferase 3 (AGPAT3), 0.0 2278 99.76 0.195444752231456 NM_020132.4 AGPAT3 Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 3 (AGPAT3), transcript variant 1, mRNA. 0.0 1772 83.08 0.268236380424746 TCONS_00002511_4 sp|Q9NRZ7|PLCC_HUMAN PLCC_HUMAN 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma; 0.0 733 93.35 0.997340425531915 1 coding 0 1 1 1 -0.0412744740473938 0.713417128343766 0.0287754779538906 0.702320934835781 CTCGCTGAGGCCCGACGCAGGGCCGGGCGCGCCCAGGGCCGGAGCGCAGCGACCGAGCGGCCCGGAGCGGAGGCGACGCCGGGGCCACGCGCGCGAGGAGCAGGTGGCGGCGGCTGCAGGCCTTGAAGTTAGAAACCTCCGAGGACGATTCTCCCGCTGACCCTGCTGACCCTGGGCCTCGGACGGCCATTCTCAGTGAAGGACCCTGCACTCGCTACTGAGCTGTGGCCATGGGCCTGCTCGCCTTCCTGAAGACCCAGTTCGTCGTGCACCTCCTCATCGGCTTCGTCTTCGTGGTGAGCGGGCTGGTCATCAACTCCATCCAGCTCTGCACGCTGGTCCTCTGGCCCGTGAACAAGCAGCTGTACCGCCGGCTGAACTGCCGCCTCGCCTACTCGCTCTGGAGCCAGCTGGTCATGCTCCTGGAGTGGTGGTCGTGCACGGAGTGCACCCTGTTCACCGACCAGGCCACGGTGGACACCTTTGGGAAGGAGCATGCAGTCATCATCCTCAACCACAACTTTGAAATTGACTTCCTCTGTGGGTGGACCATGTGCGAGCGCTTCGGCGTGCTGGGGAGTTCCAAAGTCCTGGCAAAAAGGGAGCTGCTCTACGTGCCCCTCATCGGCTGGACGTGGTACTTCCTGGAGATTGTGTTCTGCAAACGGAAGTGGGAGGAAGACCGGGACACCGTCATCAAAGGCCTGAAGTCCTTGGCCAACTACCCCGAATACATGTGGTTCCTCCTGTACTGTGAGGGCACACGCTTCACGGAGAAGAAGCACCGCGTCAGCATGGAGGTGGCCGCCTCCAAGGGGCTGCCCGTCCTCAAGTACCACCTGCTGCCTCGGACCAAAGGCTTCACCACCGCAGTGCAGTGCCTCCGCGGCACAGTCACAGCTGTGTACGACGTCACGCTGAATTTCCGAGGAAACAAGAACCCGTCTCTGCTGGGGATCCTCTATGGGAAGAAGTACGAGGCGGACATGTGTGTCAGGAGATTTCCTCTGGAAGAGATTCCACTGGATGAGAAGGAAGCAGCTCAGTGGCTTCATAAACTGTACCAGGAGAAGGATGCGCTGCAGGAGATATATAACCAGAAGGGTGTGTTTCCTGGGCAGCAGTTCAAACCCACCCGCCGGCCATGGACGCTCCTCAACTTCCTCTTCTGGGCCACGCTCCTCCTGTCTCCTCTCTTCAGTTTTGTTTTGGGCGTCTTTGCCAGTGGATCCCCGCTCCTGATCCTGACGTTCCTGGGGTTTGTCGGGGCAGCTTCCTTTGGAGTCCGCCGACTAATAGGAGTGACTGAAATAGAAAAAGGCTCCAGCTATGGAAACCAAGAATTTAAGAAAAAGGAGTAATTAATGGCTGTGATTGAGCACACATAACCTGACGGTGGTATCCAATTAACTCAATTAAAAACAGAACAACGCACCTAGAGCGGGGGAAAAAGACACTTAGAAACTATTTTTCTTATTAACTGGTGACTAATATTGACCAATAAAACTTGAGCCAAGAGTAAAGCGGTCGGCAGACCTGCAGATGGAGACGCCAGCCTCGCCCCTGCGCAGGAGAGCCGGGCTGAGCGCCTGCTCTGGGGGGCGGCCGCTCCCGCCCCCAGGGATATGGGGGCTCCCCCGGCCCGAGGGAGGCTTTGGAAACGTTCTCTTCTCGCGCTTAGATCCCGTTTTCGGTTTTTATCGATTTTCTTGGGAATTTACCCCGGCCCTCGCCTCTTCCCCTGCACCCCCTGCGGACTCTACCCTGCTCCCGCTGAGAACTGTGTGCCTGGGTCCCCAGGCCCCCAGAGCACCTACCGGCCGCTACCAGCCCGCACCCGGCCTCCGGGCGGCGGGGACGTGGCCTGGCGAAAAGCACACTGGGCGGGGCTGCGGCGGGACACGCCCCCTCCCCCGGAGCGCCTACCTGCTGACACCTTGAATCCGTTTTAAAGCGAGTGGAGCCAGAGAAAACGCGGTGAGATGTCCAATTCTGCCCATGCCCGGAGCTTAGCTCCTGTCCCCCTTGCTCCCGGCGGACAGCGGCCTTTCATCCCACCGGGGACAGGGCTGCAGGGGGCCGGCCCCCCACCCCCAGCAGGGCCGGTGCGCCAGGGGCGCTATGCACTGGAGAGACCTCGGCCGCAGGGCTGGCAGATACTTTGAAAAGGCGGTGTCACATCACCCTGTCTTCTAAAGGTGATTGGAGACTGTTAACACTGAGCTTTTTAAAGGTTTTGTTTTCACAGTTGACCTGATGGAAACTCAGAGGTGGGGAGCCTTCCCCACTCCGTCACCTCCCTTCTGAGCAGGTGCGTGTGTCCAGGAGGATGTTGGCCTTTGGGGGAGGCAGGGGAGTCCCTAGTGTCCGGGCAGCATCCTCTCCAGCCTGCAGCCAAAGGGAGGCGTTTCCTGCACTCTTGGGCCTCTTGGCCTGGCGGGGCTGGAAGCCTTGGGGTTGCCCAGCAGGGTGGACCTGGGCCGCCCCTCCAGCTCCGCCACCCGCCTGCATCCAACTTTCTTCTTAAACTTTCAACTTGCTTTTTTAAAGTCACACTCCCCTCATCTTTTTTAATAAGGGAAAGAAAAATAATGGGTGTTATCTCTGCTGTCCTGTAACCAGCATTCAAAATAGAGGCAGGTTGAATTTTCTGGGGTGGGGGGGGTGGAATGAAAGAAAGAGGAATGGGCAAAATTATAAACCAAACTGAAAAAAATAATTATGCATTGGCCCTAAGTCTGAATTCTGGGGAGACCTGTGGAAACAGCAGATCGCCTTTATAGTGACACTATTGAATTTTGGGTCGGTGACCTTGGTAATGGCACCAAGGTCGCAGGGACGTGCCCCGCAGTTCTGTGCTCACTCACAGTGACCCCGAAGGCACACATGTCCTCTCGAGGCTGGGCACTGAGACAGTGTGGAAGCCAGCCGCCCTCTGCCCCAAAGCTTGCCTCCCGCTTCCCTTCGGGCGTGGAGCCTGGCACGCAGTAAGGCCACTTCCACCTGGGTGAGCGGCTCCCTTAGATCTTGTTTTTCTTCACATAACATGCTGCTCACCTGTGTGTGTGTGTGTGTGTGTGTCATTTGCTAATCCACTCATCCCTGAAGAGCTTAAAGGAAGAAGTTGAAGGGCACTACTGTGAAGCTACATTACCTGGAAAGTGCAAATTTAGATCTTTTACCATTTAATTAATAGTTCTTGCTTCCTAGCCAAGTTCCCTCCCCTTGAAATTGATACACAATATGTAAATTCTATACTGAGTCAGTAACCAGCTGTGAAGACTCCTGGGTGAATGGAGATTGAGACCACGTGTAGGTTTTAAATCTCAGTGACTTCCTTCTGATTTAACAAAGATTAGCTTGTGCATTTGAATACCAAGCCCTTTGAGAGCAATAAAAATTACACCATGAATGTTTGCTTTTTTTTTTTTTTTTGGAGGGGTGGATCTTGCTTTTCATCCACTTCAGAGGGAAGAGGGGGGAGGCTCCTTTAGTTTTTTTAAATTAATAAATCTCAGAACAGTGCTTTTCTTACTTCTTCTCCTTTACCCCCTTTGTTACTGATGTTCTCATTGTCCAGAATCAGGCTGAGTGTTGGGACAGTCCTCCTGGTCACCACCGGGGAGGATGCACTCCAGACCCAGCACATGTGGCCCCAGGTCGGATCGGGCGGGACCAGGAATCCACGGTGTTGGGTGACCGCTCTGCCAGGGGAGAGGTTTGCTGAGTCTCTGGAGGTGTAGCTTTGTTGCTGCAGCAGCGTCCAGAGCCAGCCCCACTCCCACTGGAGAGACGAAAGGCAGCAGCTCCAGGCCTTGGGTCCCTCCCACAGGTGCCCGGTGAAGGCCGAGTTCTGAGTCCAGGCCGCGGGATGGTGTATTTCTCAGCTCAGGCCCCGGTGCTGTGTCTTCTGTTGCCGACACACGTGTCCTGGTGCCGCCTGGCAAGTAGAGTCTGGGTCCTGGGCCCTCCTTGTGTGTCCAGCCGTCCCTCTGGGGGGTTCCAGGGGCTTCTGGGGTGCCTGCACCACTGCAGCACGGTGGCCGTGTGATAGGTGCCCCTCTCATGGTCCTGTGACAGCCCTGGAACAGGTGAGCAGATGCTGGGGAAAGGCTTACCTGCTCAGGGGAGACCACTGACAGGATTTTTAACCCCAAAGAAGTGACCCTGGTCATCAGCTCCTTGGTGACAGTGTGCTGGACGCACAGCCCTGTCTGAGCCACAGCCCCCCTCTGAGAAGCAGAGTCAGACTGAAGAGATGGTCTCTGTATGAACTGCTCAGTAATGACTTGAATCAGCGACATGAGTAGTACTTGCTTGTAAAGGTGACGCAGGCGTGACCGCCTGCCAGGGCAGTTTGGAATCTCCGCCTTGTTTGCCCGGTCACCCCCCACCCCTGTGTGCGCCGTGGCATGTGCTCTTTTTCACTCTAACTCAGCCGCTGAGCACCGATGTCCACCTGCAGAAGAGTGGTGCATGCAGTCACGTGCAGGTCAGGCGCTGTCTCCAAGCTGTCCACACCCATGTGACCCCTGTTCGTGTCAGATTTGAAGAACAAGTCCCTCTCAGCATGTTGCTTTGTCTCTGCCTGAGACACCTAGAGACAAGCCACATAGAGTCTTCGGAGCCCGACTGACTTTCAGCTGAGCTGACCCTTGTGTACCGTGTGCTGTGAGTTTCTCACCACAGCTGCATGCAGCCCTGGCACGCACCGTGGCAGGCAGTGGTACCTTGTGGTTTCCCCTGGCAGTGTAACCAGGCTTAGGGGTTAAAATCGTCAGCCCAACGTGCCCACCTGCTTCCCTCTGAAGACAGCATGTCCCCCCTCTACGTGCCTGCCCCTCTCTAGCAAGATAGCTCCTGGGCAAAGGCAAGCCTCTCCCCAGTGCCCTTGGGGCCAGCCACACCCCTGACACCCCCAGACTTGTCCTGGGCCGTGAGTGGTGCTGCAGGCAGGCAGACTTTCCTGTGGGTTCTGCATCCTTGCATGTCAGGGCCAGGACGCACTTAAGCTGGGACCTTTTTGGGGTAGGTGATGTCACACTACATTCTGCTTGATGCAGGGGTGGACATGCATGAATTGAGTTCACCCCCAGCACTGGCCACTAGCTGACTCAGTGCAATGGAGGCATTCCTACAAATGCCCCGGAAGGAAATAAGAGCCCTCGGGGGAACCCAGGAACTCAGGGCAGTTGATTCCAGTCAGGCTGGCAGCAGCCGCACCCTCCTTTCAAAGACAATTGAAATGCTTTAAAATCTGAAGCTTTGTGATGACAAGTTCACTGGGAGTTTTCTTTTCCTATAAACTTTTCAGTTTCTTAACTTTTTGTTTGCAAAAGTATTTTGGACAGAAGTGGAACTGTGAATGAGATACTGAAATGCACTAAATTGTGTTAACTGGAGTTACTTGATGCCATGAAGAAATGCATCTGATCTACTCGTATTTATTGTCTCAGAATTGTACGTGGTGACAATCAAATGTTCCTTGCCTACATACCAGGAAATTCAACTGGCTTCTGAATCATAACGATCGTCAGCAAGTACTGTAACTGTAAATGAAAATCTCTCTCTTTGGAAAACAACACAAACCATCGACCGAAATGTGCGGGACAGATGTCGGCATTCTTTTTCCAATATTGATCCTCTGCCGTACCTGACCGTTGGCCAGCTTCAAAGGGTGATAAATTGTATACAGGGTGCAAATGTACTATATGGATGCTTCCTTTTGTACACTTCGTTTTTACAATTTTGCTACTGCTTTGTGTAGTGGAGGAGAGCGGTATTTTTGGTCTATGGGAGCCTGTCGGGGGTGGGGGGTGGGGGTGGGAGCTAACTCCTACTCTAAACGCCTGTATCCCGTGAGAACTGGCTGCACTTGCCGTGTGCTGCAAAGGTTGCTTTGTGCTCGGGTGTGCTCGAGCCTGCCTGAGCGGCGGTATTTTCTAGATAGAATGCTGTGGGCGTCATGCTTGTTTATTGAAATTGCTGCTGTGAAAGCGAGGGATAAAATATCCACACTATGAGACAGTGACTGCCTGCCTCCTCCTGTCCCTGTGCTGCTGGCCCGCGGAGGGTTTTCCCTGGGCACTTCTGGCCCTTGGGTTCCCTGCCTGCAGGCACCCTGAGGCTTGGACTGTTTCTGGAGACTGTCCTGTGATGACACTCTATGAGCCTCCCCATCTTGTGAAAGTTGCTTTTGGAAGGGAACTCAAGCAGAGCGATGGTCAGGCGAAAGCAAGGCAGAAAGATCAGCTGGTGCCTAAAGCATGCTCACTGACCCCTCTGCATAAAAACCAGTCTGAAAAGCCATCTAGGACAAAAAGGTTTCCAAAGTAGGCATGTATATATCAAAAACTATTTTTTTGTAAAAGCAAATTCACTCTGTGGAGAAAACCCAGGAACCCTTCTTTATAAAGAAAAATACTCTTGTCAGAACCAAGAGCTATTCCAGGGTCTGATTTGTCTGTCTTGTGAAAATAAATCGAGCTAAAAGACTCA EMBV3_16943 AATTGCTAACCAGAGTAAAAATTGCAGACCAGCCACCAGCAGTGGGACCAGGATCAGACC Gene GeneID:768022|MGC137030:NM_001077081:11_cdna Constitutive 0 NULL GeneID:768022 7 GENE MGC137030 NULL hypothetical protein MGC137030 EMBV3_05248 TGTGTAATTTTTTCTAAACTATACTTCATCTATTTTCTTTAGATTACATCAAGTTAACTG Gene GeneID:529059|MEOX1:NM_001035376:260_cdna Constitutive 0 NULL GeneID:529059 19 GENE MEOX1 NULL mesenchyme homeobox 1 EMBV3_16538 CCACAGATCAATCAAACTGGGGTATTCGGAAGCCAGAGGTGTACCACTTCAAACCCCATC Gene GeneID:317777|PLA2R1:NM_175051:55_cdna UTR3_Alt 2 NULL GeneID:317777 2 GENE PLA2R1 NULL phospholipase A2 receptor 1, 180kDa EMBV3_01374 ATGACGAAACAGGGAATGGCGATTGCTCTCCGGGGCTTTTTCTGGAGATCTAGGTCCTTG Gene BVT0102_305588 - 1 EMBV3_19669 GK000028.2:28457154-28483402 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162138 1 XLOC_099020 NonCoding TCONS_00162138 XLOC_099020 NonCoding NonCoding - 28:28481146-28482836 - TSS121470 1690 1 TCONS_00162138_3 73 1 0 0.000595753483649345 2.37832148870452e-05 0.000377825172641676 3.43959585360147e-05 8.47207523276522e-05 0.00010159719434422 6.90143569875258e-06 0 8.87056452987534e-05 1.21730907762599e-05 2.70909453230372e-06 0 2.376919416673e-05 1.39171196981665e-05 3.1933826607892e-05 0.000218794454811438 0 4.45400689023208e-05 0.000246102487656401 0.000174466652671232 3.41295376309147e-05 4.39093283276421e-06 5.97127143794677e-05 0.000575355330447245 0 8.33784182599397e-06 0.000117876377934525 1.7050567818828e-05 5.17058663070378e-05 0 0 noncoding 0 0 0 0 -0.0372459206695865 0.749623874304023 0.0235190526242397 0.658555145800926 AATTATCCAGTGCTCATTTAACATAACCCTTTCCAATTATAAAAAGCTGTGTGTGTGTGTGTGTGTGTGTTTTAAGCTGTTTTATTAACAGAATGAGACAGTGAATGAAAAAAGGTGCTTGGCACACAGTATATGGCTCCACAACACACTACTTCCATGATGGCTATTTATTGAATGAATGAATGATTCCTAGTAAACTGACCTTTCTAGAATAACTCTGGATTCTTTTGCTTACAAAACCTCTATTTTTCATAGATTAGTGTTCCACATTTTTCAGAATGTTTTTTCATGCAGGGAATGGGGGAGAGAGAAGAAAACCACTCTGTCTCTTGCTGTCTCCCCAGTCCAGTCAGCCTGGGAGGAGAGAACGGTCTTGATAAACTAATTCCCTGATCTTTACTCTGAGTGACAGAAAGACACACCCATATAGGTCACCCCAACTCTTTTCTTTTCACCTCAGTAAAGGGTAATTTCAAGAGGATGTCATCTCCCCTCAGTCTTCCAAGCACTTCACCCAACTGTTGTCTTTAAGGCTCCCAGCAAGTTACTGGAGCTGGAAGAATAGGAAGAAAGGGCCAGTGTGGAGGCCTCGAAAGCTCTGGCAGCCAAAAGACTATTCTATTTTGCAGCAGTCTTTAAGGTATCTCCTAATCTGAGTCATCTGATTTCTTTTTTATCCATGAATTTGTCTCCAGAGATGGTTCTCTCATCTGCTGGAAGCTGATGGGGTGCAGGGTTTGAATTCTGATCGTTTACAGTTTTAAGTCTTGGTTTACCCGGAAGACCCACGGGTCAGTCTTTTTTTTTTTTTTTTTAATGGGAGCGGGGTGTGTGGATGGCAGCGGCCTGACTACTCCAGTGGCGAGTGTCTTTGGTCGCACAAGTCTGCCCGGAAGCGAGGCCCGCCAGTCTGATCTGGTTAGGCTCTGGCCCGCCCCGGCACGGGAGCGTCTGATGTAAGTTTGGTTTTCTCTTCCATCAGGATTCTGTGTCCCAGATTGATAAATCTCTTAAGTAAATAAAGGTCGAATCTGTCAGAACCTCTTCTCACCGTCAGCAATCTCTGTTAGTTTTCTATATTACCGCCGTCGGGTCACATTTTCTGTGGCACCGCCTGAATGACGAAACAGGGAATGGCGATTGCTCTCCGGGGCTTTTTCTGGAGATCTAGGTCCTTGATCCTGATGCAACTCTCCGGGTCTTTTACACAAAGCGTTTTGGTGAGGACGGGCGCTAGGACCCAGCAGACGCCTTGGGTTCTCTCGCCGCTGCGGACTGGAGAGACAGCCGCACCGCAGTCGGTCCATCGGGCACGCGGGTGGGTCTGTGTGTCTCTATGATGAGAGTCAGTTCCCAGCTCAAGAACCAAGCGCTAGGAACCCGGGCCCATCAATACTGCTTTAACCACATTTCCCAAACCCTCTTCTTGTAGGCAGCTGGAAGGAGCGGACACTGTTTGGGGACCAGGCTCACATTCCGGGCACGGACCCTGGCCCCCGCATTAGTCCATCCCCTGGGGCTGGAGAGTAATAGGCGGGCGGGCAGGTGGGGCGGCCGGGAAGAGGGAGAACGGTGCCCGGAGCAGCCCAGTCTTTGCACCCCACCCCCAGTCCTTTCGTAAGGCAAGGTTAGCGTGGGGTACGTGTGCGAGAGCCGGCTGGATTAACGTCTGCTCCCGCACCGCCGTCCC TCONS_00159435 . 5' 567 TCONS_00159435 . 5' 567 EMBV3_43148 CGCCCGGAACAGGCTTCTGCAGGGCTTGAGCCAAGGCCGCCGCGATGCCGCACTTCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33634 CCCAGGTTCAGCTCGTGAGCTCCGTTCTGGCCAGCAGCTGCTCCCAAGGCTGCGTTGCAA Gene BVV0102_398859 + 0 NULL GK000020.2:70499521-70820593 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31435 GTGCCCTGGTCCAGCTGCAGCCACTGACAGGTCCTGGATGAAGCCCTCCTCGGCCGCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04900 CGAAGATGTGTGATCCCCCAGGCCATCGAGCTAGTGGCACTGTGTTCCAGTGGGGAACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27856 AGGAGGATTCACACACTTGTGGCTTTTCAAGGCAATGAACTTGCCCTCTACTGAGGATGG Gene BVV0102_065612 - 0 NULL GK000028.2:27254707-27511422 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16857 AGCAGCTAAGATAACAATTGGTCGAATCAGGTGACCCCCTAGCCATCTGGGCCTGGCAAT Gene GeneID:505884|KLF6:NM_001035271:20_cdna Constitutive 0 NULL GeneID:505884 13 GENE KLF6 MGC127307 Kruppel-like factor 6 EMBV3_16687 CAGCCTATAACACAAGGCCTCATCACATACAGGTGCAAATCTTGTTTGGTGGCTCTCTTC Gene BVV0102_184836 + 0 NULL GK000015.2:54468448-54484801 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01626 CATCCGGGCACATCACTTCATGGCAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACT Gene GeneID:530461|LOC530461:XM_002687711:146_cdna Constitutive 0 NULL GeneID:530461 5 GENE LOC530461 NULL similar to C37A2.6 EMBV3_15279 AATTTGTTGCCAAAGCTGGAGAGCTCGTGGAACCCTGGAGGTCAACCTTCTGAGTTATGT Variant GeneID:282589|HSD11B1:NM_001123032:22_cdna 389^470 3 EMBV3_16268 GeneID:282589 16 GENE HSD11B1 NULL hydroxysteroid (11-beta) dehydrogenase 1 EMBV3_11229 ATGAATGATGAAGGGGACCTTCTGAAGGAGAAAAGAATAGAAACCTCAGAGTGTGCCACA Variant GeneID:538526|LGSN:XM_002685202:51_cdna 59^188 1 EMBV3_40885 GeneID:538526 2 GENE LGSN GLULD1 lengsin, lens protein with glutamine synthetase domain EMBV3_13042 CAACATCATGGGGGGCAAGGAGCAGAATTCACCAGCTGCTGTCAGTGAATGGTGTGAGCG Variant GeneID:616283|LIN7B:NM_001046577:385_cdna 360^427 4 EMBV3_43022 GeneID:616283 18 GENE LIN7B MGC137426 lin-7 homolog B (C. elegans) EMBV3_21117 ATGACTGCGGGTAACTGCGGATATGGGCTGACCACCCTATGCCACTTTATAAAAGGGACT Gene BVV0102_051069 - 0 NULL GK000005.2:109290382-109380947 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08543 CTTCATGGTGTGAAGGACGTGGTCGGGGCTAATCTAACGTGCGTCTTCGACAAGTAAGAG Gene GeneID:505521|TNFSF14:NM_001101855:30_cdna Constitutive 0 NULL GeneID:505521 7 GENE TNFSF14 MGC157058 tumor necrosis factor (ligand) superfamily, member 14 EMBV3_23883 CTCCTAAATTGGGACAGGTCCAAACAAAGCTCCCTTTGCCTATATCAGGAGCTATTCAGA Gene BVV0102_104006 - 1 EMBV3_15769 GK000006.2:28075891-28373099 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30905 CGGGAGCAGCTTACTCTATGGAGCTCCAGAGGGCTACGCGACCAAGCACGTGGTGGAAGG Variant GeneID:445423|FANK1:NM_001003904:18_cdna 117^294 1 EMBV3_39116 GeneID:445423 26 GENE FANK1 MGC134451 fibronectin type III and ankyrin repeat domains 1 EMBV3_31673 GAGCTTCTGTCTCGCACCTTCACCACAAATGGGACCCAGAAGAAGATCCTTGACATCGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32150 TGCCAGCGGTAGCAGTGATAGTGACAGTGACCCGGACTATGGAAATAATGGTTTTGGAGC Gene GeneID:786958|NCKAP5:XM_002685418:20_cdna Constitutive 0 NULL GeneID:786958 2 GENE NCKAP5 NULL NCK-associated protein 5 EMBV3_17741 CACGCACGGGGAGCTGGGCGAAGGCGCCAGATTCTGGGGAGCAAGTGCTCGTGGACGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05954 CAGTTGACGGAGGGGTCAGTGCAACCAGCTTCACCACAAGAATCCTATAAAATAACCTGG Gene GeneID:538772|DARS2:NM_001102222:172_cdna UTR3_Alt 3 NULL GeneID:538772 16 GENE DARS2 MGC157196 aspartyl-tRNA synthetase 2, mitochondrial EMBV3_40051 GATCAGCGACCAAGATCAAGACTTTCTCGGCTACATGATTGACTTGAAGGTGCAGGTGCG Gene GeneID:100337085|LOC100337085:XM_002683992:6_cdna Constitutive 0 NULL GeneID:100337085 Un GENE LOC100337085 NULL testis-specific protein-like EMBV3_43594 GCTTGTTTACTGAAGGTGGTCTCATATTCTCCACTTAGCTGAGCCCAACACCTAGCAGCC Gene BVT0102_137269 + 0 NULL GK000021.2:21732702-21884239 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120679 1 XLOC_073243 NonCoding TCONS_00120679 XLOC_073243 NonCoding NonCoding - 21:21855696-21857655 - TSS90095 1959 2 TCONS_00120679_2 91 0.234303215926493 1 0 7.17384934411817e-05 7.02635278382422e-05 1.46019799980141e-05 0 2.5202626205679e-06 0.000204507698605125 2.97687777371321e-06 3.32117359396347e-05 6.04145303913126e-05 0 0 0 0 0 0 0 0 0 3.65287911580094e-05 0.000174359944827936 1.91667706153187e-05 0 0 0 1.99598361556273e-05 4.31576249016248e-05 3.17559781100465e-06 0 2.47810388662938e-06 0 XM_005216690.1 RASSF5 PREDICTED: Bos taurus Ras association (RalGDS/AF-6) domain family member 5 (RASSF5), transcript variant X1, mRNA. 1e-28 132 78.26 0.0816743236345074 XR_245087.1 CCDC13-AS1 PREDICTED: Homo sapiens CCDC13 antisense RNA 1 (CCDC13-AS1), 8e-06 57.2 87.50 0.0239918325676366 0 noncoding CCCTGGAAGAATTAACACTAACAAGCAGCTCCTGGTCCCAACACCTGTCACATGAAGTCAGCGATGCCCATCTCGGTCCACTCTGATCAAGATGCAGCTGTCAATCATCCACTTGGATGTCGTCGTGGCAACGTGAAACTATGTAAGTTTCTCAGCCTCATTTTCAATATTTCTTGGCTGGGTAACGCTGTGCAGACCAGCAATGGTCCATGGCCAGGCCTTTTACGTGGCGCTGGCCTCAGAATGCATGAGAATGTTTATAAATTCAAGAATTTTAAATGCAGAGGGATATCTTTCTTCTTAGGTGAAAATTCTACTCACAGGTAATAGAGCCTCAAATCTGCCCTTAATATTTCAAACATGTTTGTAGTCACCACTGTTTGGGGGCAGTTGATTTTCCAGTCATCTCTCCTGCCTCTCCTCTCTCTTAAAAACAGAAAATAATACATTAAAGTTTCTTAAGCATTCTTGGAATTTACACTCAGCAACACATGACCCACTGAGCTCCATGAAGGTGAGGCGTGAAGAGAATGTTCTGTCAATGAGAAATTCATAAGTGCTCAGAACAGAGCACAAAATTTGCAGTTCTTAGGCAGGGTTACAGCGCCATTGGATTCCTGCAGATGAAAAGAGGCTTGGGTTTAGATCAGCCCAAGCATCTCTGTAGGTTAAATCTCAGAAGAGAAAGGCTGCTGCAGTAGTTCAAAGTTGGTCCACGTTGGCCGTAACAAGACTGGTAACTGGGAACGACCCGAAGGCATTGTAAGATACAGACTTTTGAGTCCCGCCCAGATCCTGCAGGCTTGGGGCTGGACACAGGGAACTGCATTTTATTTTTTAATAATTATTTGTTTGGCTGTGCTGGGTCTTAACTGCAACATGTGAGATCTCTTAGTTGCAGCATGTGGAATCTAGTGCCCTGACCGGGGATCAAACCCAGGCCCCCTGCTTTGGGAGTGTGGAGTCTTAGCCACAGGACTACCAAGGAAGTCCCCAGGGAACTGCATTTTGACCAGTTTCCTCCAGCAGGGAATCACAAATGGTGTGGCCACTGAACCTGCCCTTCTGCGAAAGAACCAGGAGTGACCAGTGGCTCAGAAGATTTGGTCTTGGTAAAGTAAAACAGGTCCAAATAAAACCAACTGGGTTTATTGCACTGGAGCGAGTGCTAGCACTACAAAGCCCTGGCATAGAGAGACCCGTGGAATAAATCCACCTGCTTGTTTACTGAAGGTGGTCTCATATTCTCCACTTAGCTGGGCCCAACACCTAGCAGTCTCAACTAGTGTCAGCTGTCGTCCACAGCCCAGGAAATCAAAGCTCAGAAGGCTTGTCATTTGCCGAAAGCCAAGTTCTTAGAAAAACCAAGACTTGCCCCAGGGCTCATGCCTCTTTTCCTCTGTGCCTCAAGTTTCCTCATCCATACAATGGGGATAATACTTGCCAATTCTCAGGGTGGTTGTGAAAATTAAATGAGGGAATGTCTTTGTAAGTGCACTTGGCCTGGTCTCTAGTAAACAATAATAGCTGTTCAGATAATCATGATCAATTTTGAAAGTCTGAGATGACATAAAATCTGTTTCCATTGCTGGAATTTGCTTATCCCAGATGGTTCTTGTTAGCACTAAATACCGTGGAGATGCTGATTGGCCAGAACTGTCCTTGCACCTTGGTGGAGACTTTCCATTTGGGCCAGGAGGGCCAAGCACCCTGCAAATACCCCACCCTGGACACACACCTGGCCTGCACTTGTTCTTGGGGAGACCAGCTGGCTGGCGGAAGTTCCCTGCAAACATGTTCCTAGGCTGAGCCCCTCTGAGAGGTTTCACAGTGGGGACCCATCCAGAACATTTATTATGTCCATAATATGCCAGGCATGGGGCTGGGCACTGGAAAATAAAGGAACTGCAATAAATGAAGCAGAGTCTTCCCCTGCCATAAGCTTACAAAACTTTCAAG TCONS_00118796 r 5' 30582 TCONS_00118796 r 5' 30582 EMBV3_37690 CAGAGGACTTGCAGGGGAGCTGGAGGTAGGAACTGTCTTCGCACATCACCCTCCTTCACA Gene BVV0102_196420 + 1 EMBV3_32242 GK000001.2:67810800-67839379 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38146 AGTGGCCCACCATCTCGGCAAGATTCGCTTCCATGATCTCCAGGGTGACAAGTACTACAA Gene GeneID:369021|RDH12:NM_183363:44_cdna Constitutive 1 NULL GeneID:369021 10 GENE RDH12 DSSDR2 retinol dehydrogenase 12 (all-trans/9-cis/11-cis) EMBV3_19493 GCCTTGAATTCTAATAGGACAGAAGTCTACCAGGCAGGATACCAACTGCTCCTTCCAGCT Gene BVV0102_126110 + 0 NULL GK000020.2:1680677-1903853 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41352 AGAATGTTGCACCCCATCATCACAGGCGAACCACCCCTGGAAATGGAGAAATGCTGCCAG Gene BVT0102_119869 - 1 EMBV3_02224 GK000007.2:45495384-45497738 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213193 1 XLOC_130401 Coding TCONS_00213193 XLOC_130401 Coding Coding APC2 7:45478114-45497505 = TSS159786 8884 1 TCONS_00213193_8 2253 14 0.542547705002579 0.000182246571338108 9.16166975453887e-05 6.56238454870269e-05 0.000197227926509406 6.55771581563848e-05 3.22112297591742e-06 3.74164465566096e-05 0 1.15456660589954e-05 0.000290385450432134 3.60745005045755e-05 1.06256083187577e-05 1.03351008757895e-05 0.000112403200287213 2.25554562822755e-05 3.27023409826848e-05 5.60634163966274e-06 5.64855684729786e-06 4.43945393498359e-05 0.000160277417693016 1.12763272869298e-05 0 0 5.84989036105129e-05 4.445336354647e-05 0.000112055412589006 8.57372265976012e-06 1.08117709575383e-05 7.65021238919399e-06 1.75954416913393e-05 XM_005199027.1 APC2 PREDICTED: Bos taurus adenomatosis polyposis coli 2 (APC2), 0.0 1.601e+04 99.97 0.99988743809095 NM_005883.2 APC2 Homo sapiens adenomatosis polyposis coli 2 (APC2), mRNA. 0.0 6677 81.14 0.767559657811796 TCONS_00213193_8 sp|O95996|APC2_HUMAN APC2_HUMAN Adenomatous polyposis coli protein 2; 0.0 3322 81.93 0.999556147359077 5 coding 0 0 0 0 -0.239540054548517 0.347729634041844 -0.0227013565179567 0.640358245948559 ATGACGAGCTCAGTGGCAGCCTATGAGCAGCTGGTGCGGCAGGTGGAGGCCTTGAAGGCCGAGAACAGTCACCTGCGGCAGGAGCTTCGGGATAATTCAAGCCACCTGTCCAAGCTGGAGACAGAGACGTCGGGAATGAAGGCGGTCCTGCAGCACTTACAGGGCAAGCTAGAGCAGGAGGCCCGTGTGTTGGTGTCCTCCGGGCAGACTGAGGTGCTGGAACAGCTGAAAGCCCTGCAGATGGACATCACCAGCCTGTATAACCTCAAGTTCCAGCCCCCAGCTCTGGCCCCTGAACCCACTACCAGGACCCCTGAGGGAAGCCCGGTGCACAGCTCTGGGCCCTCCAAGGAGAATTTTGGGGAGCTGAGCCGGGCCACCATTCGGCTCCTAGAGGAACTGGACCGGGAACGGTGTTTCCTGTTGAATGAGATTGAGAAGGAGGAAAAGGAGAAGCTCTGGTATTACTCGCAGTTGCAGGGGCTATCTAAGCGCTTGGATGAACTCCCGCACGTGGAGACGCAGTTCTCAATGCAGATGGATCTGATCCGGCAGCAGCTGGAATTCGAGGCCCAACACATCCGCTCGCTGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGGTGCAGCGGGCGCAGATCCGTGCTTCCCGTCTGGAGCAGATCGACAAGGAACTGCTGTCCGCGCAGGACCGAGTGCAGCAGACCGAGCCCCAGGCCTTGCTGGCAGTGAAGTCGATGCCCATGGACGAGGACGCTGAGAATGAGGTCCCCACGCACCCTGAGGATGGTGCCCCTCAGCCAGGCAACAGTAAGGTGGAGGTGGTCTTCTGGCTCCTGTCCATGCTGGCAACGCGGGACCAGGAGGACACGGCGCGGACGCTGCTCGCCATGTCCAGCTCACCCGAAAGCTGCGTGGCCATGCGCCGCTCAGGCTGTCTGCCGCTGCTGCTGCAGATCCTGCACGGCACTGAGGCCGGGGCCGGGGGTCGCAACGGGACCCCCGGGGCTCCGGGAGCCAAGGACGCGCGCATGCGTGCCAACGCAGCGCTGCACAATATCGTCTTCTCTCAGCCCGACCAGGGGCTAGCACGCAAGGAGATGCGCGTGTTACACGTGCTGGAGCAGATCCGCGCCTACTGCGAGACCTGTTGGGACTGGCTGCAGGCCCGGGATGGCGGGCCTGAGGGCAGCGGCACTGGTGCTGCGCCGGTGCCCATCGAGCCACAGATCTGTCAGGCCACCTGCGCCGTGATGAAGCTGTCCTTTGACGAGGAATACCGCCGAGCTATGAATGAGCTGGGTGGGCTGCAGGCAGTGGCGGAGTTACTGCAGGTTGACCATGAGATGCACAAGATGACCCGGGACCCTCTCAACCTGGCCCTGCGCCGATACGCTGGCATGACCCTCACCAACCTCACCTTCGGGGACGTTGCCAACAAGGCTGCACTGTGCGCCCGCCGGGGCTGCATGGAGGCCATTGTGGCCCAGCTGGCATCTGAGAGTGAGGAGCTGCACCAGGTTGTGTCTAGCATCCTGCGCAACCTGTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGCTGAGGGAAGTGGGCAGCATGACTGCCCTGATGCAGTGCGTCCTGCGAGCCACCAAGGAGTCCACCCTGAAGAGCGTGCTTAGCGCCCTGTGGAACCTCTCGGCGCACAGCACGGAGAACAAGGCGGCCATCTGCCAGGTGGATGGTGCCCTGGGCTTCCTGGTAAGCACACTGACTTACAAGTGCCAGAGCAACTCGCTAGCCATCATTGAGAGCGGTGGTGGCATCCTGCGCAATGTGTCCAGCCTCATCGCCACCCGCGAGGACTACAGGCAGGTGCTGCGAGACCACAATTGCCTGCAGACGCTGCTGCAGCACCTGACGTCGCACAGCCTGACCATAGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCCCCCGCGACCAGGAGCTGCTGTGGGACCTGGGCGCCGTGGGCATGCTGCGGAACCTGGTGCACTCCAAGCACAAAATGATCGCCATGGGCAGCGCCGCCGCGCTGCGCAACCTGCTGGCTCACCGGCCTGCCAAGTACCAGCCAGCGGCCACCGCGGTCTCCCCGGGCTCCTGCGCGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGCCGAGCTGGACACACGGCACCTGGCTCAGGCACTTGACCACCTGGAGAAGCAGGGCCTGCCGGAGGCCGAGACCGCCTGCAAGAAGCCCCTCCCGCCCCTGCGCCACCTGGACGGCCTGGCCCAGGACTACGCCTCTGACTCGGGCTGTTTTGACGACGACGATGCGCCCTCCCTGGCTGCTGCCGCCACTGCCGCAGAGCCCGCCAGCCCCGCAGTGCTCTCCCTCTTCCTGGGCAGCCCCTTCCTGCAAGGCCAGGCGCTGGCCCGAGCCCCGCCCACCCGCCGAGGAGGCCTGGAGGTGGAGAAGGAGGCCGGTGGAGAGGCAGCCGTGGCAGCTAGGGCCAAGGCCAAGCTGGCGCTGGCGGTGGCACGCATCGACAGGCTGGTAGAGGACATCTCGGCCCTGCACACCTCATCTGACGACAGCTTCAGCCTCAGCTCCGGGGACCCTGGCCAGGAGGCCCCACGAGAAGGCCGTGCCCAATCCTGCTCACCTTGCAGGGGGCCTGAGGGGGGGCGGCGGGAAGCAGGCAGCAGCCGGGCTCACCCACTGCTGCGGCTCAAGGCAGCCCACGCCAGCCTTTCCAATGACAGTCTCAACAGCGGTAGCACCAGTGATGGGCACTGTCCTCGCGAACACTCTCGGCCCTGCTCGCTGGCTGCTCTGGCCGAGCACCGAGAGGGGCCCCCACGTGGTCAGGCGCGGCCCAGCCGGCTTGACCTCAACCTGCCTGGAGGCCAGGCTGAGCCTGAGGCCCGGGATGCCAAGGCCACAGATGCCCACGTGCGTACCATCAAGTTGTCGCCCACCTACCAGCACGTGCCGCTGCTGGAGGGCACCACTAGGGCGGGTGCGGGGTCCCTGGCCCCTGGGGCCCGGAAACAGGCCTGGCTGTCCACAGAAGGCCTGAGCAGTGTGCCTGAGAAGCTAGTGGTTGAGAAGGCACCCCTCTGCCTGTCCCGCTGCAGCTCGCTGTCCTCACTGTCCTCAGCTGGCCGCCCGGGGCCCAGTGAGGCTGGGGACCTAGATGAGAGCGACTCATCCCTGGAGGGGCTGGAGGAGTCTGGCCCTGGTGAAACAGAGCTGGATGGGGCCTGGCGGGGCCCAGGGGCCGCCTCCCTGCCCATGGCCATCCCAGCGCCCCAGAGGGGTCGGGGCCTGGGGGTGGAGGATGCCACGCCGTCCAGCTCCTCTGAGAACTGCGTGCAGGAGACACCGCTGGTGCTGAGCCGCTGCAGCTCAGTCAGTTCACTGGGCAGCTTCGAGAGCCCATCCATTGCCAGCTCCATCCCCAGTGACCCATGCAGCGGGCTGGGCAGTGGCACGGTCAGCCCCAGTGAGCTGCCTGATAGCCCCGGGCAAACCATGCCTCCGAGCCGCAGCAAGACACCACCGCTGGCCCCAGCACCACCGGGCGAGCGGGAAGCCACCCAGTTCAGCCTGCAGTGGGAGAGTTACGTGAAGCGCTTCCTGGACATCGCCGACTGCCGGGAGCGCTGCCGGCTGCCCTCCGAGCTGGACGCAGGCAGCGTGCGTTTCACTGTGGAGAAGCCCGACGAGAACTTCTCGTGTGCCTCCAGCCTCAGCGCACTGGCCCTGCATGAGCTCTACGTGCAGAAAGACGTGGAGCTGCGGCTGCTGCCCCCTGCCTGCCCAGAGCGCGGCAGTGGGGGAGGCGGAGGCCCAGGGCACCGCCGACGGGATGAGGCCAGTGGCTGTCTGGAAGGGCCGGCGTCCACCGACCAGGAGCTGGAGCTGCTGCGTGAGTGCCTGGGTGGGGCCGTGCCTGCCCGGCTCCGAAAGGTGGCCTCAGCACTGGTGCCTGGCTGCCGCACGCTGCCCGTGCCAGTCTACATGCTGGTGCCTGCCCCGGCCCGTGAGGACGACTCCTGCACTGACTCGGCTGAGGGCACTCCAGTCAACTTCTCCAGCACCGCTTCCCTCAGCGACGAGACCCTGCAGGGACCCCCCAAGGATGGTGGGCGTTTGGATGGGAAGAAGCCCGTGGGTCGTGCTGCCTCCACTAGGCAGTCTGCTGGGCAGCGGCACAGGGTCGGGGGCATGGGCCGGAGCACAGAGCAGCCCCGGGGGGCTGGCAGTGGCAGGGCAGGGCTGGAGCTGCCCCTCCGGCGGCCCCCGAGCACCTGCAGGGACACTGACAGCTCCCGCCCAGGCCAGGAGCACGGGGATGGGGCTCTGCAGTCTCTCTGCCTCACAACGCCCACCGAGGAGGCTGTGTATTGTTTCTATGGCAATGACTCGGATGAGGAGCCGGCCACAGCAGTGGCAGCAGCACCCCCACGGCGGGCATCTGCGATCCCCCGGGCGGTCAAGAGGGAGCGCCCCACTGGTGCCAGGAAGGAGGTGCAGGCTGTGCCCAAGGCTGCACCCAAGGCGGCACCGCCTGCCCGGGCCCAGCCCAGCCTCATTGCAGATGAGACACCACCGTGCTACTCCCTGAGCTCCTCCGCCAGCTCCCTCAGCGAACCTGAGCCCTCCGAGTGCATGGCCAGTCGGCCCCGGGTCCACAAGCCAGGGCTCACCAAGGACCTGGTCCCTGGGGGCAGGAAGGATGGCTGCCCCAGCCCTCGGGCTGAGGCAGAGCTGCTCCGGCGTTGCATAGGCTCAGCCTTGCCCAGGCGCCAGCCCCAGGTGTCCGGCCCAAGGCGCCGCCCACCCCGAGAGGCCCAGCCAAAGGCGCGTGCAGCAGAAGGGCCCCGGGAGCGCGGTGAGGAGGCGGCCAGCTCAGACCATGCCTCAGACCTGGACAGCATCGAGTGGCGTGCCATCCAGGAGGGTGCCAACTCTGTTGCCACATGGCTGCACCAGGCCGCAGCGGCGGCTGCACGTGAGGCCTCCTCAGAGTCTGATTCTGTTCTGTCCTTTGCAACAGGGCAGTCTGTGGGTTCCACCCTGCAGCCCACTGTGCATAGGAAGGGGTGTCGGCCAAGGGCAGAGCGCCAAGCGGGTGGTGCCCTGCGGCCAGAGAAACCAGAAGGGGCCCTCACCCAGCGCAGCAGCGGGCCGGAGAAGCCGCGTGGCACTCAGAAGGCCCCAAATGGGGTGCCGGCGGTGCTCCGGGGACATACAGTGATCTACATGCCCACCCCGGCCACCCGGGCACAGCCCAGAGGTGCCCCTGGTTCCCGCATTGTGGCAAGAAAGATGGGAGCGCCCAGCCCCGTGCAGCCGGCAGCCCCCACCAAAGCCCCCAACCCAGGGCAGCAGCGGTCTAGGAGCCTGCACCGGCCTGGCAAGATCTCAGAGCTGGCAACACTCAGCCCCCCGCAGAGAAGTGCCACACCACCAGCCCGCCTTGCCAAGACCCCATCGTCAAGTTCCTCTCAGACCTCACCGGCCTCCCAGCCTCTGCCCAGGAGGTCACCCCCTGCTGCCCAGCCTGCAGGGCCCCTGCCCGGCCCCAGGGCCTCCCCAGTGCCCAAGACTCCAGCAAGGGCCCTGCTGGCCAAGCAGCACAAGACGCAGAAGTCACCCGTGAGGATCCCCTTCATGCAGAGGCCTGCCAGGCGGGGGCCGCCGCCCTTGGCTAGGGCAGCCCCGGAGCCAGGCCCCAGGGGCCGGGTGGGCGCAGAAGGCGGCTCTGCAGCCCGAGGGGGCCGCCTGGGCCTGGTGCGCGTGGCCTCCGCCCGCTCCAGCGGCAGCGAATCCTCCGACCGCTCGGGTTTCCGGCGGCAGCTGACCTTTATCAAGGAGTCGCCGGGCCTGATGCGGCGCCGACGCTCGGAACTGTCCGCACCCGAAGCCACCAACCCGACCACCCAGGCTGCCTCGCCCTGCCGCGGCCGGCCAGCACTACCCGCTGTCTTCCTCTGCTCCTCGCGCTGTGATGAGCTGCGGGCAGGCTCCCGGCAGGCCCCGGCCCCGCAGCGGGCCCACACGGCCCGGCCCCGCCCCAGCGAGCGGCAACCTCGGCGCACCAGCTCCGAGAGCCCGTCCCGCCTGCCCGTCCGCACGCCGGCCGCCGGGCCCGAGACGGTCAAGCGCTACGCCTCCCTGCCTCACATCAGCGTGGCCCGCAGACCGGATGCCACCATCCCCGAACCTGCGGCGGATGCCACCCGCCGCAGCAGCGCAGGGGAGGCCGGGCCGCTGCCCAGGGTGGCCGCGCCGGGCACCACGTGGCGCCGCATCCGGGACGAGGACGTCCCGCACATCCTGCGGAGCACGCTGCCCGCCCGCGCCCTGCCGCTGCTGGGCTCCCCGCCGGAGGACGGCCCAGCCGGCCCACCACAGCGCAAGACCAGCGACGCCGTGGTCCAGACTGAAGACTTCGCGGCTGCGAAGACCAACTCCAGCACGTCCCCGAGCATGGAGAGCAGGGCGCCCCCCGAGGCCACGGCCGGCGGCCCCACCTCCCTTCTTGGCAGCGACGTGGACGGGCCGCCCTCCAAGGCGCCCGCACCCATCCCCTTCGTCCCCGCCAGCCGGCACGGCTCCCCCAGCCGCTCCGCCCGTGTCCCCCCTTTCAACTACGTGCCCAGCCCCATGGTGGCGGCCACCGCTGACTCCACCGTGGAGAAGGCCCCCACCCCGGTCCCCACCAGCCTCCTGGAATAGTGGCCGGGACTGGACTTCCAGAACATCTTCTCCTGGCCCAGGACCGTCTGGCTGCCCCTAGGGTGGTCCCAGGACCCGCCTGCCACCCCCAAACCCAGGGCCCCGCCCTCCGAGCCTCACCCCTGCCCACACGGGCCTCGCACTCCCGCGTAGACGCTTGCTTTTGAGCCGAGGCGGCTTCGGGAGGAAAGTGAGCTACGAGCTGGAGCGCGCGTCACCGCAAGGGGGCGCCCACGAAGCCCTGGCGCCCGCGCGGAGACCATCCTCCTGGCTAGGGCCGTCCTCAGCGGTGCCCTTCTGGGTTCCTCGCCCTGCCGGGCCCTGCATTAGCACCACACTTGCTCCCCTCTCCTCTGGGGAACGCATGGGGAGGAGGGGGCGGGAATGACAGTGCCCGCCGAGGTGGGGAAGGGGCTGGGAGGGTGGCGGCAGCAGGAGCCTGCCAGCCGAGGGCGGCGGCTGCGCATGCGCAAGAGAAAGCCTGTAATTACGGGCAGGGCCGGGTAATTGGTTAACTATGGCTTAGCTGGTTTGTTTGCGGTCTCGGCCTCAGCTGGGGGCGTGCGAGAGGGGCGTGCTGTGCCAGACAGAAAGGCCGCCCCAACCCCAGACAGACACGCGCAGGGAGCCTGGAGCACCCCAAAACTGGTCGGGGGAGCTGGGTACACAGGGCGTCCCCGCAGCCTTCGTAAGGAACCAGGAGAGGCAGGCGTGCCGGGAGCGCCGTGGCTGAGGAGAGCGAGAAACGGAGGGGAGGCCGGGGCCTAGCCACCGCCCGGTAGCCAGGCCTGGACTACGGGACCTGGATTGCGCTCTGCGGGAAGTGGTCCCCGCGGGCGCCTGCCTGGTCCCAGGTCTTTGCCTTTTCACCGAGTCTCCTGTTCTTTGGATCTGCGGGCTCCGTGGGGCGTGGCCTCCTCCCAGGGGCCAGCACACCTGCCCGAACAGCCGATCCCACTTCCCTGAGGAGCCCGGCTCTGCTCTCAGCCGCCCTAAGGATCTGCAGTCACACCGCCCTGCCGAGCTGCTCTGGGGGCCGGGAAGTGTGCCGGTTCCTGTCTCTTCTCTGGGAGGAGGGGAGCAGAGCCAGGTGGAGAGGACGTGCTGAAGGAGCCCTGCCTCTGCCCCCCTCGGACGCTGTGCTGCCGCTCCTTAAGATACACACGCTGCGACATCGCGTCCCGCAGGCCAGGGTTCGGAAGAAGGACGCAGGAAAGGCTGCACCACGTACTCCTCCTGGGGAGAGCGAGCCTGGGAAAGCGATGGGGACTGAGCAAGCGCTAGAACAGCCACTGCTGACCCTAAGGCCCCTCTCCAGGGCGGATAAGACACCTCTGCAAACGGCTGCTCCCATCCTATCAGCAGCCAGAAGGGGGGAGTGGCCTTCTGAGCTCCTTCTCAAATGTGGGGGCTGCAGAATGTTGCACCCCATCATCACAGGCGAGCCACCCCTGGAAATGGAGAAATGCTGCCAGCTTGCCAAGCTGTGGGGGCCTGGAGTGGAAGCCCCCGTACTGAGTCCCAGGCTGTGCTCTGGCAGCTGTGTGCCTGCTTCCCCACGTGGGCCGTGGGGAGCTACCTCTGGGTTCAGCAGGTCGGCTGCCATGACGGGGCAGAGGACCCTCCCGGTTGGCTGCCCCTTGCCATTCTCTCCACAGGCAGGGGCAGGGCCCGAGCCATCCCATCCTATCCAGCGCCCACCCTGCCACCTCCATCTATCACAGCAGCGGTCCACACAGCCGCTGGGCTGGTGGGAGCCCGAGGTCCTGATTAGAGTGGCTTCCTGGAGGAGGCAGTGCTGGCCACCGCTGGACAATCAGCCTGAGGCCAGAGCTTGGAGGAACAAAGTCCAAGGACCGCAAACACTCCTGTGAAGCCCTGACCCGAGAGACACAGGGCACCCAGGCCAGACCTCGGCCCGGAGCAGATGGACACTGCGAGCTGGGTGCTGACTTTGGGGCACTACCTCACCACGCTGCCGCAGCCTGAGCCTGGTTGTCTTGGCTTGTTCCCTCCCCGCCGTCTCCATCCCAGGTGCCACAGGACACCTGTAAATACGTACAGCCCCCACCTGTAAAGCCCCCACCTGTAAAGCCATCACCTGGCGGAAGGAGGCCGCAGA EMBV3_30288 ATCACTGACCTGGCACCCAATAAATGCTCCTAAGGCTAACTCTCCCTACTTCAGGTGTGC Gene BVT0102_080059 + 0 NULL GK000027.2:20852743-21315202 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25196 TCCAGGTGGGCTCTGGGAAGGATGAAGCAGGCACCCGGTGGCCACGTTTTTCCACCTGTT Variant GeneID:100139027|LOC100139027:XM_002697961:677_cdna 180^259 1 EMBV3_26190 GeneID:100139027 25 GENE LOC100139027 NULL similar to Uncharacterized FAM18-like protein CG5021 EMBV3_00283 ATTAGTCCTTATTCCCACTACCTCCTGAATCTCTGATGGATGAAGAGCAACTGGGGCGGC Gene GeneID:522824|CTU1:NM_001077954:271_cdna Constitutive 0 NULL GeneID:522824 18 GENE CTU1 ATPBD3 cytosolic thiouridylase subunit 1 homolog (S. pombe) EMBV3_40815 GATTGCATAAGCCTGTGTACCATCAACTGACTACCCAGGTGGATTTAAACAAGTAACAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27207 CCACCCCCACTCCTTTAGCTGCTACTGCCTCCTCCAGGCAATGTGAAGATAGAAGGCCCG Variant GeneID:534750|VPS25:NM_001015657:166_cdna 928^987 2 EMBV3_08136 GeneID:534750 19 GENE VPS25 MGC10540 vacuolar protein sorting 25 homolog (S. cerevisiae) EMBV3_19790 GCCAGAACCTCCAGGACAGTATTGAATTGTAGTGGCCAGAGTTAGCATTTTGCCTTTTTC Gene BVV0102_159330 + 0 NULL GK000023.2:30554767-30585742 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21473 GGAGTTTCCACAAGACCTGTTTCCACTGCAGTCCCCAAAGCAGGCACGTTCAGCCACCAC Variant GeneID:540407|CSRP3:NM_001024689:42_cdna 170^338 1 EMBV3_27882 GeneID:540407 29 GENE CSRP3 CRP3 cysteine and glycine-rich protein 3 (cardiac LIM protein) EMBV3_10466 AGCATTCTGGCATATGCATGATACTTGCCGCCCTGAGTGTGCAGAGAAAGCTGGTCTGGG Gene BVT0102_365887 + 0 NULL GK000024.2:35710606-35870000 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38031 AGAAGAAAGCTGGAAGCCCTTGTGGGAGTGGCTTGTGTCTCAGTGAAGTTATGTGCTCTG Gene GeneID:523429|IL1F6:XM_002691349:172_cdna Constitutive 0 NULL GeneID:523429 11 GENE IL1F6 NULL interleukin 1 family, member 6 (epsilon) EMBV3_30402 GACCACAGTGCTCACCACCCACCACCACTGGTGGGGTCTCTCCATGTCAAGTGCCTGTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18815 GAATCAGACCCCGGTACTAAACCATCTCCCCAAGATCCCAAATCCTTTCCACAGCCAATG Gene BVV0102_046674 + 0 NULL GK000017.2:71647013-71660016 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17198 AACCCCATCAAAGACAGAATTGCGGTCACCCCGGCATCACGGCTAAGGAGTGCAAAGAAA Gene GeneID:100301237|LOC100301237:XM_002685124:68_cdna Constitutive 0 NULL GeneID:100301237 1 GENE LOC100301237 NULL similar to trefoil factor 1 EMBV3_16225 CAACGTGGGTGACCTCAAACTCCGCCGGATGCCTGGCCCCAGGAGTGAGCAGCTTCCTGC Variant GeneID:505361|VPS16:NM_001015522:874_cdna 570^709 1 EMBV3_32779 GeneID:505361 13 GENE VPS16 VPS16A vacuolar protein sorting 16 homolog (S. cerevisiae) EMBV3_10501 GGCATTGGGCCCTACGTAAGAATGCCGTGGAACAAGGTTCTCAGTTAATGGCAAAGCAAG Gene BVT0102_181143 - 0 NULL GK000003.2:9523146-9574436 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175396 1 XLOC_105177 Coding TCONS_00175396 XLOC_105177 Coding Coding - 3:9526896-9534895 - TSS130155 7999 1 TCONS_00175396_6 145 0.964245530691336 1 0 0 4.18737977857488e-07 0 0 0 0 0 1.2003768913469e-07 8.96719143069381e-08 0 1.74312225238189e-06 4.47017758550828e-07 0 7.35091383696488e-08 1.32427884681826e-07 0.00108279149317894 0.000659503131802456 0.000221402475498414 4.48238805348061e-06 1.62683601262192e-06 2.27708318025622e-07 0.000322037747829321 0.000164822221348948 0.000686389501025997 6.02852322496321e-05 9.16026125817673e-05 3.52202860914384e-05 0.000310406209091337 3.85585124421094e-05 8.26787338041558e-06 XM_005212209.1 C10H14orf1 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf1 (C10H14orf1), transcript variant X1, mRNA. 0.0 1550 92.15 0.135016877109639 0 coding 0 0 0 0 0.0974435362252277 0.39388009932432 0.0306885255372109 0.540571878486443 GTTTTGATTTTAATATAGAGTTATGTTAGTTCTTCCTCTCCCTGTCACAGTACAGTCCAAAAGAATCTGGATATTCTGTAATATATCCCATTTGTTTGCTTTATTAAGCTTATACTACTCAGGTATTGAGGATGTACTAATCAGATCTGATGAACAAACAGTGTCAATTATTCTGGATTCCTTGTTGAGACACATACACTCCAGAGGGTAGAAGATAAATTTTTCAAAAGACGCAGGGCCCTGCCATGTTGGTTAAGTTTCTACGTGTCCAATGATCCTTTCTAAGGTAAATATAAGTTATTGTATCTTGTGCCTTTTATCCTAAGAAGTTCAATACCTTGGTAGGCATATTACAGTTTTGGAGGCAGCATAGTCTGAGCTTGGGAATACAATACTGGCCTTCACAGCAGGTCCAGACTACCATACAAGCAGTCCTGCTGCTTGGGTCATAACACCTGGAAAGTTCCATGGTACTAGAGGTACCTGTGGTAAGAAAAGATGTGTGAATTGTCTGGCAATCCACAGTAGGAGAATTCCAGCACAGATCTCTAGGGTTCTGGAGTTAGGTGGTTGTTTCTGCAGTAGAGAAAGTTTCACCATTGCAAAGCATCTCCTGGCATACTGTTAGGTCCTGAAAGAAATTCAGTGTCTGACCACAAAATATCAAGTGACTATGTGACCAGTTGCCCATATAAACAGCGTGTTATTGTCAGACATGCCAAGTCATAAGATTCGGTGGATACAATAACAATATATTTTACAGTGGAAATTGTTCACTTTGGAAGAAGCCCAAGCAAACTTGGCACAAGAAAATTAAACAAAGGGCCTCAGGCCTTCATATTACCTATATCTGTTGCACTAAAACCTTTCTTGTAGCTCATACCTATGGCAACATAAGAATTCCTTCAACCATTTGACAGAGGAAAAAGTCCAAGTCTGGTTTGTGGATGGCCTAGCTTGATCATGTTAGGGCAAACTAAGCCAAGTGAGGACTGCTGCTTCTCAATAGCCTTTTCCTGAGTGGTCCTGAATCCTAAGAGACAGTGATGAGGGGAAATTCTCTCAATGAGTAGGACTTTAGGCAGTTTAGTTGACCATCCACTTTGGAGAAAGAAGTGGCTGGAGGCAAGGATATACATGAACTCAGAGTCAGTGGGCTGGTTGGTCAAGGACCCAAAAGGAGCAAGATCAGAAAATGGGGTCTGGTAAAGAGTGTTTAGGTGGATCTGTGAGAGTGAGACTTGTATTCCCCAGAAGTGGGACTTGTATTCACTAAATAAATAAACTGTATGGATAGGATAATTTAGTTGGGACAATTTCAGCTATCCCGGTTCGTGCATAGTGTGGTTATAAATAGAATCTCTGTGGTGGCAGAAATGGAGCCTGTTTTTCAACCTGTTAACATGAACTCCTTTCTTACCCAGGCTGACTGAGCTCTGCTGTTTCTAAATGTCTGTCTTGTCAGCATCAAAGAGCAGTGCTGATCCCCTTGTTAAGTACCACTGTTCAATGAGAACAGCTCACCATTTGGTGCCAAGTTGATTACATCAAACCTTTTCCATTCTGGAAAAAACAACAGTTTAACATTCTGATCAGGACTGATATATTTTGCTTTGCCTGTAAGTGCCTGAGCCATTTGCTGGCATTGGGCCCTACGTAAGAATGCCGTGGAACAAGGTTCTCAGTTAATGGCAAAGCAAGTACAGTAATGGGCACATGACAGTGGGGCCCACTGCTCCTAAAAATACCTTTTTACCAGAAGCTTCTGACCTGGTAGAGTAGTGGGATGGCCTTTTGAAGGTGCATCTGTGGTGCCATTAAGGATGGAGTGCTGTCCTTCACAATACAGTATAAACCTACATGACCATAATAGGGTGCTTTATCCACAAAAGGTAGAATTCATGGGTTCTGGAACCAAGGGGTGGAGATAGGCGTGACCCTGTTCAATATCACTTCCGTGAGCCACTTGAAGCATTTGTACTTCCTGTCCTTGCAACTTTAAATTCTGTGGGTCTGGAGATCCTGTTTCCCAGAGTGGAGAGGCTTCTACCAGGCACAGCATAAGAATCTTAATAAAGGTATGGCTGCCATCTGGTCACTTTGGGCTCCTAATGCCAGCAGATTATCAGGCAGAAAACTTGCCATACTGTCTGGGATAATTAGCTCTGTGATGAGGAGTTAGGATCACTTTTACATCATGAATACAAACAGAAAAGTGTTTGATGCACATGTGATCCCTGGGTTAACTTTTAGTTCTCCTGTACTCAATTTTAACTGTAAATAACTAAACACTTACGGCCTGGTAGGGCATGATCTTCAGGGGCCCAGAACCCTCAGGGATGAAGATCTGGATCACCCCAGAGGTAAGCTATCTAGACTAACAAAAATTGTAGTCAGCAGGAAGATGAATCTGAAATAGGTGTCACTGAAGGAAGATGATGAGTGTCATCTGCAATTTCTGGACCAACTGCAAACCCTCTTGTGTTTCCAGAAATTGTGACTAACTTGACTTATGGAGAAACTGCTTAGATATAGAGAACTTTGTAACACAAATGGCCCCAATATAGTAGACATTGTTGGTACTCTGTTCAAAGCCTCTTTACCAGGAAGTGAGTGTTGGCTGCTAATAGCTCACTGCTGCATCTTCTTGGGAATCACTCTCTGCCAACAAAAGCCACTTCTGGAAATCCCTGGAAGGTTGTTCCTTCCCAGGGATAACACCACAGTCAATGGTATGATATTAGTTCCTGTTCAGAAGTCAGTCAGGATTCTGATAGGGATTGCATTATCAGTGATGATATGTAATTAGTAATTGTGTTGTCAGCAAATGATACTAAGGTACAAAATTCCTTGCTTTCCTCAAGGTGAGCCATTTATGTGCCAAGAGTTCCCAGTGGAAGCTAAACTTATCAGCTGAACCTGTATCTTTGCCTAACTTTTCCTCTTGTCCTATCTTGCTTCACTCACTCCATTATAGGTTTTACTTGAGAGCACTCCCTCAATAAACCACTTGCACAGAATCCCTTTCTTGGACTCTGCTTCTAGGGAGAAAACAGGAGATAATAGTGTCAACTGAGAGATTTGAGTGTGACAGAAGTAGAGCAAAGAGCAAGTGTTGAGTTCAGTTTGGGAATGTTAAGGTGCCATTGGCTGGAATAGAAGAGAACATCCTCAATCTGGTAAAGTACAACTACACAAAAAATCTACAGCTAACATCATACTTAAGGATCAGGAACAATACAAGGATATCAGCCATAACCACTTCTAGTCAATATTTTGCCAGAGGTTTTCAGTTCAGTTCAGTCACCCAGTCGTGTCCAATTCTTTGCGACCCCATGAACCACAGCACGCCAGGCCTCCCTATCCATCACCAACTCCCAGAGTCCACCCAAACCCATGTCCATTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAGCTCTTCGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAATGAACACCCAGAACTGATCTCCTTTAGGATGGATTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGTGCTCAGCTTTCTTTATAGTCCAACTCTCACATCCATACATGACCATTGGAAAAACCATAGCCTTGACTAGATGGACCTTTGTTGACAAAGTAATGTCTCTGCTTTTTAATATGCTGTCTAGGTTGGTCATAAATTCCTTCCAAGGAGTAAGCGTCTTTTAAATTTCATGGGTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAGAAAATAAAGTCAGCCACTGTTTCCACTGTTTCCCCATCTATTTGCCATGAAGTAATGGGACCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAGCTTTTTCACTCTCCTCTTTCACTTATCATCAAGAGGCTCTTTAGTTCTTCACTTTCTGCCATAAGGGTGATGTCATCTGCATATTTGAGGTTATTGATATTTCTCCCGGCAATCTTGATTCCAGCTTGTGCTTCTTCCAGTCCAGCGTTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGACGTATTCCTTTTTCTATTTGGAACCAGTCTGTTGTTCCATGTCTAGTTCTAACTGTTGCTTCTTGACCTGCATATAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGGTATTCCCATCTCTTTCAGCATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGGCTTTAGTCAGAGGTTTTAGTCAGGGCAATTAAGCAAGAAAAAGAAAAGACATTGAGATTGGAAAGGAAAAATAAAACTGTATTTGCAGATATAGGAAGTCTTAAGGAATCCACTAAAAAACTATTAGAACTAATGAGTTCAGCAAGGTTGCAGGACTTAAGTTCAATATACAGAAATCAATTGTATTTTTATGATTTGCAGTGAACAGTCCAGGAAAGTGAGACTAAGAAAACAATTCCATTCACAAAAGCATCAAAAAGAATACTTGGGATTAAGGGAGAAGAATACTTAAGAATAAATTTAACAAAAGAAGTACTGTTAAAACTACAAAATATTGTTAAGAAAGATCTAAATAATGTTCATGGAGCACATTGTTAAAATGTCACTACAGATCTTATTCGATTTACCATGGGGTTATGTCCTGATAAACCCATTGTAAGCTGAAAATATCCTAAGCCAATACATTTAATACACTAACCTACCAAACTCATAGGTTAGCCTAGTCTACTTTAAACATGCTCAGAACACTTAATATTAGCCTGCAGTTGGGCAAAACCTACAAAGCCTGTTTTATAATAAAGTGTTGAATATCTCATGTAATTTATTGATACCGTACTGAAAGTGAAAAAGAATGATTTTAAGTGTATTGGTTGTTTACCCTCATGATTGTGTGGCTGACTGGGAGCTGTGGCTCACTGTTGCTGCCCAACGTCCTGAAAGAATATCCTACCACATATCCCTAGCCCAGGAAAAGATCAAAAGTCAAAGTACAGTTTTTACAGAATGTTTATCTCTTACACACCACCATAAAGTAAAAAAATAGTAAGCTGAACCATTGTCAGTTGGGAACTGTTCTACTCCCTAATCTCCATATTCAATGAAATCTCTATCAGAATCCCAGCTTGCTTTGTGGAAATTGACTAACTAATCCTAAAACTCATATGGCATCACAGTGGACTCAAAAGAAGAAAATAATCTTTAAAAACTTACCACAAAGCAATGATAATCAAAACAGTGTGATGAGGGCTTCCATGGTGTTCAGTGGTTAAGAATCCACCCGCCAGGGCAGGGGACACAGGTTCAGTCCCTGGTCCAGGAAGATCCTACATGCCATGGGGCACCTAGGCCTGTGTGCCACAACTACTGAGCCTGAGCACCTAGAACCTGTGCTCTCTACAATTAGAGAAAGCCTGCAGGCAGCGACAAAAACCCAGTGCAACAAAAAAACAAATCTTAAAAATGTGGTGATGGCACATAGAAAAGACATAGATACAAGTGGAGTAGAATTAAGACTCCAAAGTAAATCTATATATCTGTGGTTAACTGATTTGTTTTACAAAGGGGCCAAAACCATCCAATGAGAAAGAACAGTCTTTTCAACAGTTGCCCCGGGACAACTAGATAGCCACATGCAAAATAATACGTTCAATCCTTACCTCACCCCATATAAAAAACTTAACTCAAAATAAACAGCTAAAAGTAATAACTGTGTCCATGGGATTCTCCAGGCAAAAGTACTGGAGTGGTAGCCATTCCCTTCTCCAGGGGATATTCCCAACCCAGGGATCCAACCCAGGTCTCATACATAGTAGGCAGATTCTTTACTGTCTGAGCTACCAGGGAAACCCAAGAATTATATAGGACCCCAAAAGCATGAGCAATGAAAGAAAAAGATAAATTGGACCTCATCAAAATTAAAGTTTGTGCTTCAAAGGACACCATCAAAAAAGGGCAAAGACAGCTCACTGAATGGGAGAAAATATTTAAATCACATAACTGATGAAGGATTTCTATCTAGAAAAACTATGTACTATTACAACTCCATAATAAAAAGACAAGTAACCCAATTTAAAAATGAGCAAAGGAGGGCTTCCCTGGTGGCACAGTGGTTAAAAATCCACCTGCCAGTACTGGAGACACGGGTTCAATTGCTGATCGAGGAAGATCCCACATGCTACAGAGCAATTAAGCCTGTGCACCACAACTATTGAGCCTGTGCTCCGGAGCCTGGAAGCTGCAACTACTGAGCCCATGTGCCGCAACTACTGAATCCCAAGAGCCATAGAGCCTGTGCAGTGCAACAAGAGAAGCCATTGCACCACTGCAATGAGAAGCCTGCACATCACAACTAGTGACTAGGCCCTACTCGCCACAACTAGAGAAAAGCCCGCACGGCAACAAAGACTCAGCACAGCCATAAATAAAAACTTTTAAAAGAAAAGTGAAAGTCCCTTGGTTGTGTCCGACTCTTTGCGCCCCATGGACTACAGTTCTCCAGGCTAGAATACTGGAGTGGGTAGCCTTTCCCTTCTCCAAGGGATCTTCCCAACCCAGGGATCAAACCCAGGTCTCCCACATTGCAGGTGGATTCTTTACCAGCTGAGCTAGCAGGGAAGCCCAAGAATACTGGAGTGGGTTTTTAAAAGAAAAACAACCTATTATTTTAAAAAGTGAGCAGAGGACTTAAATAGACATTTCTCCAAAAGAAACAAAAATGAGCAATAAACACATGAAAAGATGCTTGACGTTGTTCGTCATCAGGGAAGTGCAAATCAAAAATCAAACCCATTAGGATGTCTGGAATCAAAAAGTTATTAAACATTGGTAAAGATGGGAAAAAACTGGAACCTTTATACATTGCTGGTGTGAAAGTAAAATGGTACAACAGCTTCAAAAAGCACTCTGTCAGTTCCTCAAATGATTAAACATAGAGTTAACCATATGACCCAGCAATTTAATTCCTAAGTATATGCTCCAAAGAAATGAAACATATGTCCAAACAAAAACTTGTATATACATTTTTATAGCAGCATTTTTTGCAATAGCTGACAGGTAGAAACAACACTAACATCCATCAACAGATGAATGGTTGAACGTATACAATGGAATATTTGTTTTAAAAGAAGTACTGTTACCTTCTATCAGTCAGTTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCGACTCTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGTGTTCACTGAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCCCCAGTTCCTCCCAGCAACAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACCGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTGCCCAACACCACAGTTCATTCTATACAATGGGTGAATTTTGGAAGCATGCTAAATGAAATAAGCCAGTCACAAAAGGCCACATACTATATGATTCCATTCATATGAAAGTCCAGAATAGAGAAATCTATAGGGATAAAATAGATTAGTGGTTTCTTGGAGAGGGGTGGGAGATGGGGGTGGGAGGTGATACCTAAAGGAACCTGGGTTTTTGTGGGGTTTTTTTAGGGGATGAAGATTATTGAAAATTGACTGTGGTTATGGTTGCACATATCTGTGAATGTACCCAAAGCCATTCAACTGAACGCTTTAAATGAGTGAATTGTATGGTATGTGAATTTCATCTCAATAAAGCTGTTTTTTAAA TCONS_00168370 . 5' 1383 TCONS_00168370 . 5' 1383 EMBV3_42866 TTATAAACTTTGGTTTCACCTGCACTATGACGGAGGGCGGTGTAGGTGGCAGAGGGCTCA Gene GeneID:535132|SIPA1L2:XM_002698788:149_cdna UTR3_Alt 2 NULL GeneID:535132 28 GENE SIPA1L2 NULL signal-induced proliferation-associated 1 like 2 EMBV3_30485 TCATCTTCCTGGTCATGCCACTTACCCTCATCCTTATCTCTTACGGTTCCATTGCCTGGG Gene GeneID:538947|LOC538947:XM_002697378:16_cdna Constitutive 0 NULL GeneID:538947 23 GENE LOC538947 NULL similar to putative olfactory receptor-like protein EMBV3_37976 TGACCATGAAATCACAACTTCAGATCACTGTATTGTCACCCCTGTGAGTAAATTACATTT Variant GeneID:508431|ITCH:NM_001082428:955_cdna 209^350 3 EMBV3_41811 GeneID:508431 13 GENE ITCH MGC152011 itchy E3 ubiquitin protein ligase homolog (mouse) EMBV3_00140 TGTGCTCCCTGCTCGTGGCTGGGGTTTATCTTGTGGGAATGACAGATGCTTTGATCCACA Gene GeneID:100140748|LOC100140748:XM_002693614:132_cdna Constitutive 0 NULL GeneID:100140748 15 GENE LOC100140748 NULL similar to olfactory receptor, family 5, subfamily W, member 2 EMBV3_10492 TCGGGGTCCCTTAAACTGCGACAGCAGAAGCCTCCTCTGACCTCCAAACTGGAACGGTGT Gene BVT0102_137161 + 0 NULL GK000013.2:54971369-55002480 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043111 TCONS_00043109 TCONS_00043110 1 XLOC_025852 Coding TCONS_00043110 XLOC_025852 Coding Coding DIDO1 13:54952021-54994530 = TSS31937 8417 1 TCONS_00043110_9 2196 17 0.802390138326903 2.47542806310899e-08 1.94735057545694e-19 1.86234874112206e-12 4.93180214132961e-10 2.87415821421477e-05 9.25998693886885e-10 1.45766445998515e-13 9.42814958534185e-11 3.64364227528168e-06 0.000240624355529224 4.15571686444785e-05 1.39835531192654e-05 6.17954596123665e-05 9.13635304302657e-05 2.63070388440186e-06 0.00120675887173812 0.000334990550798793 0.000833164639594085 2.12839721519777e-06 1.35747812398882e-05 1.77374669484725e-10 0.000233946294196143 0.000691824164321428 0.000892873729691363 9.18209522352101e-13 2.00236360780091e-05 3.41822322058547e-10 0.000372474815856984 0.000184433600064323 0.00049018546952147 XM_003586830.2 DIDO1 PREDICTED: Bos taurus death inducer-obliterator 1 (DIDO1), 0.0 1.518e+04 100.00 0.999881192824047 NM_033081.2 DIDO1 Homo sapiens death inducer-obliterator 1 (DIDO1), transcript 0.0 3388 76.33 0.551978139479625 TCONS_00043110_9 sp|Q9BTC0|DIDO1_HUMAN DIDO1_HUMAN Death-inducer obliterator 1; 0.0 2727 69.46 0.996812386156648 3 coding 0 0 0 0 -0.0122925844938405 0.921968579953114 0.0605268523963534 0.336800265838927 CCCGCCCACTCTGCGGCGCTCGGAGGAAATGGCTGCGAAACCCTGGAGGCTTGCGGCCCACGGAGCTTACTCCGTGGACACAGTCTCAAGATAATTTGCCTTGTGATCTGTGAACAGTGGCTGACGACAGCAGCATTGGGGGCCTGGTGCTTTCCTTGTGCCACAAGGTTGTAACGGCCCTGTTTGTGCTGGGTTTAGGAAGTCGGGAGAAGTGCCCATGCTTCTGTGTGGGGCAGGTTTTCATTCTGTACGAGTCCTCCCCCTGGGATGGAACGTGGCATAAAATCTGAGTTGTCATTAGCATTTAAATGTAATTGAAGCCTGTACAGCTTGGGGAAAAAATTCTTAAGGTATGGATGACAAGGGTGACCCGAGTGGTGAGGAGGCGCCCAAAGCCATCAAGCCCACCAGCAAGGAGTTCCGGAAGACTTGGGGCTTCCGGAGGACCACCATTGCTAAGCGCGAGGGTGCCGGGGATGCGGAGGTGGACACCCTGGAGCCGTCGCCCCGGCAGCAGCAGAGCCCATCCCTGCGGCGCAGTGGGCGGCAGCCAAAGCGCACTGAGCGGGTGGAGGAGTTTCTGACCACTGTGCGGCGCCGTGGCCGTCGGAGTGCCCCCGTGTCCCTGGAGGACTCTGGGGAGCCAGCGTCCTGTCCAGCAACAGACGCGGAGACTGCCTCTGAGGGCAGTGTGGAGAGCGCCTCAGACGGGAAGAGTGGGCCCAGGTCCAGCTCCACGGGTGCTAAGCAGCGGCTGGCCTCCTCGGCAAAGGCCAGAGAGGGCGAGGACGAGGACGACACGTCCGACAGCGACAGCGACGGACTGACCTTGAAGGAACTCCAGAACCGCCTGCGGAAGAAGCGTGAGCAGGAGCCCGCGGACCGGCCCACGAGGGGCATCCAGAACCGCCTGCGGAGGAAGCGGCGGGAGGAGGACCCGGCTGAGACCGTGGACGTCCAGGCAGGGGATGTGATGGAGGGCTCACTGCCTGCCTCACGGGAGCCTGAGGGCGACCTGGGGGCTGCGGCCCAGGCAGTGAAAGAGGACAGAGAGGGCCGGCAGGATGGGAGAGTGGCCCCAGGAGGGAGAGCCGAGGAAGCCGCAGACTCGATCCGGCACAAGCCGGAGTGTGAGGTGTACGACCCCAGCGCCCTGTACTGCCTGTGCCGCCAGCCTCACAACAACAGGTTTATGATTTGCTGTGACCGATGTGAAGAATGGTTTCATGGTGACTGTGTGGGCATTTCTGAGGCTCGAGGGCGCCTCTTGGAGAGGAATGGGGAAGACTACATCTGCCCCAACTGCACGATCCTGCAGGTGCAGGATGAGGCCAGCTCAGAAGCCACAGACATGCAGGACACGAGGTCAGGACCCCTGGGTGCCGACAGCACGGACTTCACCAGTATAGGAACCGTGGAGCAGAAGTCAAGTGAAGACCAGGGAATTAAGGGTAGAATTGAAAAAGCTGCAAACCCAAGTGGCAAGAAGAAACTCAAGATATTCCAGCCCGTCGTGGAAGCACCTGGTGCTGCCAAGTGCATCGGCCCTGGGTGCTCAAGCGTGGCACAACCTGACTCGGTCTACTGCAGCAACGACTGCATCCTGAAGCACGCTGCGGCCACCATGCGCTTCCTGAGTGCAGGGAAGGAGCAGAAACCCAAAGCAAAAGAAAAGCTGAAGACAAAGCCAGAAAAAATCGTTCTTCAAAAATGTAGCGTTCAAGCAGGCATTAAAATCTCTTCTGTGCACAAGAGACTGGCTTCAGACAAGAAGGAAAACGCGGTGAAGAAGGCAGCAGTGGCCCCTCCCAGGAACGAGGTCCTCACTAAGGAGCCAGTCTGTGAGAGCAGCACGCCGTCCTGGGCCAGCGACCACAATTACAATGCAGTAAAGCCAGAACAGACTGCTGCCCCCTGGCCGCCACTGTTGTATAAATCCGTGAAGGAGGACAGACGCATGGAGGACAAGATGGCTGTGGTGGTGGCGAAGAAGTTGGCTCCTCCAGGCTCCTCGGGGGCCGGCAGACAACCTCCGGGCAGAAATCTCCTTCCAAAGAAATCCCCTTCTTTTGCAAACACAGCGGTGGCCAAGCCCACTGTCAGAAAGTCGCCCTCAGGCTTCAAGGGCACCATCCCTAAGAGGCCATGGCTCTCGTCCACCACCTCCCCCTCAGGCAGCGCTCCCTCTGCCAAGCAGGCAGGGCTGGTGACTGCTGCTGCCACGTCTGCTTCCAGAAAGTTCCCCAGCTCTACTGCTTCTGTGGGAGCTGTCAGGAAGCCTGGGAGCACCTCCGTTCCCCTGGCCTCTCCAGCGCCAGGACGCCTGGGCCCCGTGAGCCCAGCCTCATCCCAGCCAAATTCACAAATTCGGCAGAACATAAGACGCTCCTTGAAGGAGATCTTGTGGAAAAGAGTCAATGACAGTGATGACTTAATTATGACAGAAAATGAAGTAGGGAAAATCGCACTGCTCATCGAGAAGGAGATGTTTAACTTGTTCCGAGTCACGGACAATCGGTACAAGAGCAAGTACCGCAGCCTCATGTTCAACCTCAAGGACCCCAAAAACCAGGGACTTTTCCATCGAGTTCTGCGTGAAGAAATCTCATTGGCAAAACTGGTGAGAATGAAACCAGAAGAACTGGTCTCCAAAGAGCTCTCTGTGTGGAGAGAGCGAACGACAAAGCCTGTGATGGAGTCCAGAACGAAATTGCACAATGAGACTAAGAAGCCTGCCATTAAACAGGAAGCTGTTCCCGACATGGAAGACTCTCCACCAGTGTCAGACTCTGACGAACAGCAAGAGTCGGTGCGGGCGGCCCCCGAGCGGAGTGCAGCGCCGCTGCCGGGCGTCTTCAGCAGCATGCTGCAGGACACGACCAGCCAGCACCGGGCGCACCTCTTTGACCTGAACTGCAAGATCTGCACGGGTCAGGTTCCATCCTCGGAAGATGAACCAGCTCCGAAAAAACAGAAGTTATCAGCTTCTGTCAAGAAGGAGGAGTCCAAGTCCAAGCGCGACAGCCCCCCACCTGATCCAGTTCTCAGCGAGGCAGATGACGCGGCACCCGAAACCCCGCCTGAAAATGCCTCAGAGCCAGACCTGGAAAGTGCAGCTCACACTCACTTGGAGGGGAAGTACCTCCCAGTGCCTCTGGAGGACAACCAGCCTGAGCCCCCAGCCCTGGAAGGTCTGCCCTGCCCCACCCCTGGTGGTGGCAGTGTGCTCACCATGGTCACGATGTCCGGCCGGGACCCCAGGACTGCACTGGGCGGGCCGAGCACGGCCACAGCTTCTGCAGCAACCCACCTGGAGGGCACCACCCCAGCAGAGCCCCGACAAGATGTACCAAAGCCAGTGCCACCCTCCGTGACGGTGCCCAAGTCCATCCTGGCCAAGCCGTCCGCGTCCCCCGAGCCCAGATACCTCCTGTCCGTGCCACCGTCCCCAAGCATCAGCATCTCAGAGTCCCGGTCCCCTCCTGAAGGAGATACAACCCTCTTCTTGTCTCGACTCAGCACCATTTGGAAAGGATTTATTAACATGCAAAGTGTAGCCAAGTTTGTCACTAAGGCGTATCCTGTCTCTGGATGTTTTGATTATCTCAGTGAGGACCTGCCCGACACGATTCACATTGGTGGGAGGATTGCTCCAAAGACCGTTTGGGATTACATCGGCAAGCTCAAATCCTCAGTGTCCAAGGAGCTCTGTCTGATCCGCTTCCACCCCGCAACCGAGGAAGAGGAGGTGGCCTACATCTCACTCTACTCCTACTTCAGCAGCCGCGATCGCTTCGGCGTTGTGGCCAACAACAGCCGGCACGTCAAGGACCTCTACCTGATCCCACTCAGCGCCACTGACCCCATCCCCTCCAAACTGCTGCCCTTTGAGGGGCCAGGTCTCGAGTCACCGCGTCCAAACATAATCCTCGGGTTAGTGATCTGTCAGAAAACAAAACGGCCCTCAGGCGCTGGCGAGCTAGACAAGACAGAGGAGAAGCGGGCTCGCCTGCTGACACAGGACGAGGTGGAGCCTGTGCATCCCAAAGTGCCTGCTGCCCTGCCGCCGGAGAAGAGGCCCACCAAATACCAGCTCTGCCCAGGGGACGCTGCTGTCAGCACCACGCCCCCAGGCTCTCCCCCACCCCCACCCCCTCCTCCAGAAGCACCTGGGGCGCCAGGCTCGTCTTCCATGTTGAAAATACTGTCAACACTCAAACCAGGAGCCACAGCACCATCCGGGACGGCGGCAGCAGCTCCAGCGGCTGCTTCCTCTGTCTCTTCTACTTCAAAGACCGCCTCGCCCCTGGAACACATCCTGCAGACTCTCTTTGGGAAGAAGAAGTCCTTTGACCCCCTCTCCAAAGAGCCTGTGGAGTCGGCCCCAGCCCCCCACCAGGACTCCAAAGCCAAGACCGATGGGGGGCTGACGGCAGCACCCCTGCTGGATCCCATCGTCCAGCAGTTCGGTCAGATCTCCAAAGACAGAGCCCTGGAGGAGGAGGAGGACGATAGGCCGTATGACCCCGAGGAAGAGTACGGTCCTGAGAGAGCCCTGGACACTCCGCCCAGTGACCGGACCAGGCACCAGGACGCGGAAGAGGCCCCCGAGGCAGCTGAGCGGGAGGAGGTAGCCTACGACCCCGAGGATGAGACGATCTTAGAGGAAGCCAAAGTGACCATCGATGACCTGCCCAACAGAATGTGTGTCGACACACGTGGCGGGCCTGGCCTCTCTGCCCCCTCCTTGGTGGAGCAGCAGAAGATGATTGAAGAGCTCAACAAGCAGATCGAGGAGCAGAAGCGACAGGTGGAGGAGCAGGAAGAGGCGCTCAGGCAGCAGCGGGCCGCCGTTGGGGCCTCCATGGCCCACTTCTCCGTGTCAGACGCACTCATGTCACCGCCTCCAAAGGCCACACTGCCCAAGGCCGAGCTGTTCCCGCAGGAACCGCAGGCTGCAGTCAAGCCGGCTCCGGCCCCCGCCACCAACCAGGCCCCCGGCCCAAATGCCGAGGCACGGCTGAGCCGGGACCCCAGGCAGGCCCGGCGGTTGGCCGTGGAGAACAATGAGAGCGAGGCTGCCCTGAGGGCCCCGCCGGCCAGAGAAGCACCCGGAGGGGTCTCCGCCGGTCCAGGGCTGCTGCCGGCCCAGGAGGAACCTGAGTCGGCCCCTCCACCATGGACTCTGGGTGAGGAGGCCCCACTGCCGGCCAAACAGGATGGTCCCCCTCATGAGCCCTCAGAAACCCTCGGGCCAGAGAGCATGGCCGGCCTGGATGCTGTGGCCAGACCTGCCCGGAAGGTACTACTGCCCACACCACCGGGCGCCTCCTTCCAGCCTCTCTACCCTCCGCAGAGTGAGGGCCAGGCCTTCCCCCCTCCTGGTTTCTCAGGGCCCATGTATGCACCTCAGGAGAACCCGATGGGCTCCTCCCAGTACGATGACCCGAGAAATGCTCAGTTTGCCGAGAAAAGTGACGCCCTGGCCACTGACACTGAAGGAGACAGAGAGCCCCAGCCCAGGCCAGGCGAGGGGGCTGGTGTGTTCCCCGCCTTGGCACAGAAAGGGGGACCTCCACCCCAGTTTCAGGGCCAGAGGGAGCCTACACCGCGTGCTTTCGGGATGTCGGGCCTTCACGGCCCCAGTTTCCCGGCTCCTCGGGGGCCAGTCCCTCCATTCTCAGAAGAGAACACTAATAACGATGGGCCAAGAGGAGGCCCTCCACCGGCCAGATTCGGGCCTCCGAAGGGACCCATCCCTTCCCTGTTCTCAGGGCCACATGGGCCACCTCCCTATGGGGATGGCAGGGGCCCCTCCCCGTCCCACCTAGGAGGACCCAGGGGAGCAGGGCCGCCTCTGTTGGAAGAGCGTAAGGACGCACACGGGGAGAAGAGAGAATACCCGGATGCCCTGTATGGCGAGGCCTCAGGTGGCCCTGCCCAGTGCGAGGGACCTGAGCAGGCCCCATTCCCAGGAGGCCGGGGTGCCACACCGTTCCAGTTTGGAGGTCAGAGGAGGCCTCTGCTGTCGCAGTTTAAGGGACCCCGAGGCGGCCCTCCTCCCTCTCAGTTCGGAGGTCAGCGAGGACCCCCACCCGGCCACTTCGTGGGCCCAAGGGGGCCACACCCTGGGCAGTTTGAAGGCCCCAGAGGCCAAGCGCCTGGCTTCGTGCCTGGACCCAGGGGCATGCAGCCTCAGCAGTTTGAAGAGCAGCGGGTCCACTCACCGCCCCGGTTCTCCGGCCAGAGGGCACCTGCACCCCTGCCCTTTGGGGGACCTCGGGGGGGTGCCCCATTCCCGGAGAAGAGTGAACCGGTGCCTCCCCGCTTCCACTTCCAGGGTCCAGCTCCCCCCGGCCCCAAGCCAGCGCCCAGGCCACTGCTGGAGCTGCCCAGCCACCCTCCTGCACCGTCTGCCGCACCGGCCCAGGGCCCAGAGGCCGACTTCCGCGAGGGGGGCCGGGGCCACGAGTACAGAGGCCCGGCCTTTGAGGGGCGGCCCCGCGACAAGGCCCCAGAGGACCCTGAGGCCCCACCACCTGACAGCCGCTCAGGCCGGGCCCTCGATGACCGGCGGCGGGAGAGGGAGCGTGGGAAGCCCTGGGAGCGGGAGCGCGGCCGGACCTGGAGCCGCGAGCGGGACTGGGACCGTGGCCGAGACTGGGACCGCCACCGTGACAAGGACGCTGGCCGTGACTGGGACAGGAGCCGCGAGCGGAATGGGAGCAGGGACAAGGGGCGTGAGTGGGACCGGGGCCGAGAGCGGAGCCGCAACAGGGACCGCGACCGCAGGCGCGACCGGGAGAGGTCCCGCAGCAGGGACCGAGACCGAGACAAGGCCCGAGAGCGGGAGCGCCGCAGGGACCGCAGCCGGAGCCCGGAGCGGCCCCGGGACCCCAAGACCGAGACCCCTCGGGCTGCCGCTCCGACTGCCCAGACCTAGGGCCCTGCAGCAGCCGCAAGTTGGAAAGAACTGGGGGCTCATGCGCAAATAGAACCTTATGGACTTGAAAAGTTACTGTAATTTTGTGTATAATGGTTTCTTAAAAAATTTCACACCTTTACAATTCCTATGCTTTTTTAGAAACAAAAAACTAAGAACTCTTAACATTTCCATTTAAATATACTGAAATGGGAACGTACCTACAAAAGCATATTGCTTTTTCAGATTATAAAGTTATCTTTTCTAGTAACTTGACTGTTGTAAGTTGTGAGGGAGTTTAGTGGCTGTTAAAGCCATACCTTTCCTGACATCTCACCTGTGTGTCTGTTTCCAGAGGTGTGGCTGTTTCCAGAGTCTGGTTCACAGGGTTCGGACCTGGTGGCCATGGGTTTCTGTGCATGGCTGTCAGCTAACCTCTGGATGGTTGAGAAATGCCAAATTTAACAGATGCATCTTTCTCTCGTCACAAAGAAATTTGAATTACAAATTTCAACCAGGAAACAAAACATTTCTTAGTTTTGCTCAGTTTTTATGTATTGCCTTACAGTTTTTCTTTCCCCAAAAAAATGATTAAAAGCAACATCTGAATAGAAACTGTTGAATTTTAAATAATATTTAGTTTAAAAGATTTAAATTTTACCAGTCTAAAGAAAGGAAATAAATCAATTAAGTGTAATTTAAAAGGTGGGGTGGGGTGGGAGGGCCGTTCTTTGACTTGAATAATCAGGAACAGTTTTTTGGTTGGACTTTACCACCTGAGCAGTTCTTTCTTATGTCCCAGGAAAAGTGCACTAGCTCCACACTGCTGTCCTTGTCAGGTGATAAGTCTCAGCATTTGTCGTTGAAATGGAACAATATTTGTATAAAGCCTGAGGTGAAAATAGCGCTATTAGCTCAAAAACTGCAAATTAGAATGCTTTTCACCGTGAAGCACAGGAAGCTGCTTCCCGTCGTGTGTTTCCAAGTATTTCTGAAGTGGAAAGTAGAGGAAAACTTGCTAATTTATTTGACTGTATAAATATCATTTGATATTTTTTTTTTATATTTTCATAAACTTAATTTTGCAAATGTAAAGTTAGAGAATTTCCTTTGTTCTTTGGAGTCTATTCCATTGTACATCACTACAGATTCTTCCCTTTCTAGCACAAACGTTTAAGCTGCGAGAACATTGAGAACTTAGCAGTTTGGGTGATTTGTGGGTGTTACAGACCCTATCAGTAGGTTAAGTTACATTAAAGTGGTGACGAGTTCCAACATCTAATGTGATGTGAAGGTTTTTTTTTTTTTACATGTAAAACAAAAATTTTCTAATTTAAATACAACCAAATGTAAAAAATCAAGTGTGTTTCTTTAGGTTTACTTGATAGAAATTTCTGTAAATTGTATTTTATATTGCAAAGTATTATATCACTGTACATTTAAACATGGAACTTCATAGCTTTGTTACATGAAGTAGAATAAACATCTACAGAAA EMBV3_07290 GTTCCCATAACTGAGGAGCCATGCCTTCCAAATGTTCCACAACCGGACATCAAGATTCCC Gene GeneID:783113|LOC783113:XM_002686025:190_cdna Constitutive 0 NULL GeneID:783113 3 GENE LOC783113 NULL similar to small proline-rich protein EMBV3_07012 TCACCAGGCTATCGAGGTGAACGCATCAATGAGCTCATCCGGCAGCTGAATTAAACCCAG Gene GeneID:522029|RPL7L1:XM_002697242:430_cdna UTR3_Alt 5 NULL GeneID:522029 23 GENE RPL7L1 NULL ribosomal protein L7-like 1 EMBV3_35098 GCGCTGCAGGAGCTGGGCGGCGGCGGCAACGCGGGATTCCGGAAGAGGACCAGTCGCCTC Variant GeneID:281134|ECE2:NM_177958:8_cdna 101^187 1 EMBV3_40589 GeneID:281134 1 GENE ECE2 MGC152524 endothelin converting enzyme 2 EMBV3_08022 TGCTGAGACGCAGAAAAAGTTCCCCAGTGACCTGGCTGCAGCCGACATCTCTGCCTACTA Variant GeneID:506974|GATSL3:NM_001081514:44_cdna 883^987 2 EMBV3_43294 GeneID:506974 17 GENE GATSL3 NULL GATS protein-like 3 EMBV3_13790 CCCGAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAGAGTTCACAT Gene GeneID:527492|CTNNA2:NM_001102110:101_cdna Constitutive 2 NULL GeneID:527492 11 GENE CTNNA2 MGC148616 catenin (cadherin-associated protein), alpha 2 EMBV3_40610 GGATTCCAAAACAACTGATAAGGGTGTAAAAATACGTAGTTTCAACTTCAATTCTAGGCC Gene BVT0102_098425 - 1 EMBV3_39106 GK000001.2:82694777-82705703 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001349 TCONS_00001352 TCONS_00001350 1 XLOC_000328 Coding TCONS_00001350 XLOC_000328 Coding Coding C1H3orf70 1:82573539-82698797 j TSS680 5590 1 TCONS_00001350_3 186 0.0323792486583184 3 0.955395706427585 2.36108584091634e-05 0.00028612037024787 2.86795755216859e-09 8.81997173889378e-05 4.04359289814026e-05 0.000124523236590467 4.00346235469505e-07 5.59765423190508e-05 5.6136552975141e-05 1.87820244876941e-06 1.0505562148895e-06 5.79569486381541e-06 4.85148832956141e-06 1.54049308359888e-05 0.00011002918903972 0.000358931927915752 0.000514842485304997 1.49263285242381e-05 1.52976654832583e-09 2.94008071553105e-05 2.97937823246591e-11 0.00024327906328884 0.00011965207004893 3.30676044674485e-09 4.13711155394708e-10 0.000115892027568117 5.89655584834683e-10 1.07686157174699e-12 1.61072327329754e-05 0.000144147141438602 XM_005201555.1 C1H3orf70 PREDICTED: Bos taurus chromosome 1 open reading frame, human C3orf70 (C1H3orf70), transcript variant X1, mRNA. 0.0 8157 100.00 0.808944543828265 NM_001025266.1 C3orf70 Homo sapiens chromosome 3 open reading frame 70 (C3orf70), mRNA. 0.0 755 75.85 0.195885509838998 TCONS_00001350_3 sp|A7E369|CC070_BOVIN CC070_BOVIN UPF0524 protein C3orf70 homolog; 4e-86 258 100.00 0.645161290322581 0 noncoding 0 0 0 0 -0.662629237581007 0.056514393953777 -0.0697643941348756 0.244750995098845 GTGTGTGTGTGTGTGTGTGTGTGTGTGTACGAGAGCAAAGTGGGCCGCGCGTGGGGCAAGGCTGTGCGTGTGTGAAAACTCCGCTCCCACCTGCGCAGGGACTATAGCGCACTGGGCGTCCGGGTCCTCAACGTGCACAGCCCTCCGCGGAGTGTGAACATGTGTTTCGGAGGGAGTGTGTGTGGGGGAAGCGTGCGTGGAAGCTGGCGTGCGTGTGAAAACCGAGCCTCCGAGGCGGCTGTGTTCCTAACAGCCCTCCGTCCGTGGGGGCCAGCCTACGGAGGTTGAGTGAGTGTGCGGCGGCAGCAGGGCCGCCGAGCGTGTGTGAGCAGCCGTGTGTGAGAAGGCGGGGCTGGCGGGGGGACTCGTGGCGTCTGCCGGAGCCAACGCGCGTGTGTGCGCGTGCGTGTCCACGTGGGGGCGCGGCGCGCGCCACGGCGGAGGGAGGGAAGGCGGCGGCAGGCCCAGCCCCCGGTCGCAGCGCCCGGGGCGGCTCCTCTGCGAGCCTAGGGACCGCTGCGCTCCCGCCGCCGCCAGCTCTGCTACCGCCACCTCCAAGGGCTGACCTGACTCCCGGCCCGCGCCGCGCCCGCCTCGGCTTCCTGCCTGCCCAGACGCCGCTCCTACCGAGCTCCCGGTCTCGGCTCCGCGGAGTGAGAGGAAATGAGTGCGGCCGCGGCGCCGGCGCCCGAGCGCGGTTGGAAGAGCGAGAAAGTGGACGAGGCTCAGGCCCTGGCGCGGAGTTGCGCCGCCCGCAGACCCGACTTCCAGCCATGCGACGGGCTCTCCATCTGTGCCACGCACAGCCACGGCAAGTGCTTCAAGCTGCACTGGTGCTGTCATCTCGGATGGTGTCACTGCAAGTACGTGTATCAGCCGATGACCCCTGTGGAACAGCTGCCCAGCACTGAGATTCCTGCGAAGCCTCGGGAGCCTGCGAACACCATTCAGATTTCGGTCTCCCTCACTGAACACTTCCTGAAATTCGCGTCTGTTTTCCAGCCCCCTCTGCCCCCTGACTCGCCAAGTTCCGAGGACTCTGGGATCAACGCGATTGGGGCTCACTATGTGGAATCGTGTGACGAGGACACAGAAGAAGGAGCAGAACTGAGTTCAGAGGAAGATTACAGTCCAGAGAGCAGCTGGGAGCCAGATGAGTGCACCCTTCTTTCCCCCTCGCAGTCTGACCTGGAAGTGATTGAAACAATAGAAACCACCGTGTGAGGCCCGGCGGGAAGCCACTGCTCTGCTCCATGCTGAGCTTTTGTACTTCTGTCCGATGGACCCTTTTTCCAGTGCAGTCAGTGTTTTCTACCCCTCTGTAACAACCGTAGCAGTTCAGTGGTCTGCTGATTAGCTTCACTTTTAAATTTGTCTTATAACTAAGACATTCTTTTGTTATAAATGGTTTTCTTTTGTATCTTCACTTCCTTTCTATGTAGCATCTGGTGTCATGAATTGTGACCCAGCCTTAATTTCACTGGGAACTTTGAAAGCGATGAAGCGATGATCACAGAGCGTCATGGATCAGGTTGAGGAGATCCCAGAGTGAAGGAGACACTGTTCTGTAAATAGCCAGTTCTTCGCGGAACAGCTCTCTGGCAGTCCTTCTGGCGGCTGATGAGCACCGCTGCCCTGCTAGTCCTGGTGGGAAACTGGTTCACGTGACCAGTCCAGGGTGTGCTCTGGTGCATGCCATTCTGGCCTTTCCTCATCTCTCTGCTATCTGCACTGGCTCTGGGCCAGTGTTGCCACAGCTTCCTGGAGGCCAGCTCAGCCCCCAGTTAAAGCAGTGTCTGCACAACCAGCCCTTCATGACCTGGGGCTGGGCTAGACCTCGCTCCAGAAGAGATGACATCATCTGTCTCATGCTCAGTCCAGCTTAGGTTGAATGCCTATCCCCCCTCCAGGGTGCTATGTGGATACGGAAATGAATAAGGCCTGACTCCCAGCAGGAAGGGACCGTAGTCTACTAGGGGAGGTAATCCATGCAGGTGAGGGGACCTAGAGTGCCCTGGGAAGCCGGGGGAGGCAGAGATGCACTTGGCTTGGGCTGGCTGGAGAAGGAGTAGCATTTGAGCTGGCCTCAGGGGTGGCTTCCCCAACATTTCCCTGCTTTTTCAGTTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCTGCTTTTTAAAATTGTTCAAATCTGCGGGAGACTTTTAGGAAGTTATATAGGTATTATATTTAGGAGGCAGCCACATCTCATGTCTTAAGGGAAAAAAATCAATAATAGTTTTAGTTAGCATGGAAATGCTAAAGACAGCAGTCCTTTAGGGATTAGGAATGAATCTAATAGGTTTGATTAACTCTGCTTCATTTGGTTGTATGAAGCATTAGAATGGCTTAGGTGAGAAATGGATTAGAATTCAGTATGATGCATGGATTTTTTATGCCGATGCAAAAACAGTTGAAATAGTTCACTGCTAAGTCAGGAGAAAATATTTTGTGTAATATTCATTCCCTTTACTACAGTAATATTCATGGGCTATTGTAAATGTTCTCTTTTCCTACACACATAAAATAGTGACTGATTCTTTCTTATTTAGCTCTCTTCAGAATTTTGCTCCTAATCTCCATTTATAACAGGTGTTCTTGTGTAACTTCTCCAAATGTACTGTCTGTGAGGCACAGTTAAGAATCCAGGAAATTTGAAATAGGCCGCATGAAACTAAACTATCCAAGCTGGGGACAGACAGTCACTTCCTGTACCCTGACTCTCCATGAGTGTGCTCTCGTGGCGTCATCTTGTGCCCTGTCAGCATCACGACGCGACTCTTCTGTGTCTCGTTAGTTCGTATTTTAAGAAACAAGAAGGGGCCTGTGTGTCCTTTCCTGAAGCCTCCACTTGGCATCCTGCACAGATCTCTCCAGGCGGAACCTGCTTTCCTAGTTATATGTGCAGTCCATGTGACTGGCTAGAACATTTCGTTAGGTTCAGGTGCCCTAAACATCCTGAAGGGTTTAGAAAGCAGAGTGTGCGTATTCCTTTGGAAGCAGTGTTACTTAACACTTTGTGTGCTAACAGGTGAGAATGCAGCCAGCATCAAGTTCCCACTTACTGAAACATAAAGAGTCAACACATCAACCCGAGAAGATGGTGTCCAGAGCTCCAGGGCCAGCGGGGCCCAGGAGAGGGCGACAGAGGTGGGTGTGGGGAGAAAGGCTTAGGGACAAAGGGCTGATGAGCCCTGCTCTGGGCTCTTAGCACCACTGGGACTGACTGGCCGCCTGCAATCAGGGTCCTGTCTGCAACTAGCCGTGGGTGAGCTCATTTCATCCCTGGACAGGAATATGAGGCTCTGTTTGCACTGTTCCTATTAGTTCTCTCCTCCATCTGTTCATGTGGTGATAGTTGGGGTCAACCACCAGGTCTCTAAAGCCATGGAAATCCATGGGCTCAGGGCCACGCTTCAGGCTGGCTGTGCCAGGGTTGGGCCGTTCATATTTATATCTATGACTTTTGCCTAGGTTCCTGTTTTTTAAAACTCCTGAACTGCCATTCAGATTAGCCAGGATTTTAATGGAATTTTTAGATTTAACACTAGTTGATAATCACTTTAAATACTTGCACAAACTCTTTATAATTAAAATCTCACTAAGATTCACTTACTACTATCAATTTTATAGAATTGGAGACATCCCATTGGATTCTAAATATAAAATGCTCCTGGATCTCAAAATAGCCTTTTCTAAATAAGCACAAGCAAGAATTTTTTTTTGTGCTATCACTGTTAATATTAATAATTGTCTGAAATCATATATGATTGAACCAGAATTCTTTATGCTTGGATTCCAAAACAACTGATAAGGGTGTAAAAATACGTAGTTTCAACTTCAATTCTAGGCCTATTCTGTTCTGTATTATATGAAAGAATTTCTCTGTAATCCTGATACTACATTATTCATTTGTATAAGCATATTTATAGGCACTTTAGAAAATGTTTAGACTGCAGTGTGTATTATAGACATTGAACACAGTTATGTTAAATAGGCTTTTGATTAATACTTGTACATTGAGAGATATGAAAGCTTTATCATTTGGACCTTTGCTCACCTGGGCAAAGAGGTGGGCTGTGTGAATGGAAAAACTGCTTTCTCAGGCTTTTGTCAAAAACTGACACCATTCCCACTTTTTGAAAGTTGGTGTAAAAGCTGTTAGGTAGAAGATACGAAATAAGTACTGTGTGGAGTTTAGCTTTCTGATCTAACCAAGATTTCTTTTAGCATTTTCGAGTTTCACATGTGTTCATGACTTTTCTGAGAAATAACAAAGCAATTAAAATGCTTTTAGTGGTTATAACTATTTGGTACATTAACAATGGAAGCTTTACAATAAAAAATCTAGGTATATTCAAGATTTGAAATGCAAATCTGAGAAAAACCTATGTAGAAAAACTGCCGCATTCCTGGAAGGGGACGACCTGTAGTTCAAGGTAATACAGTAAAAATAAAATCAGCAGAACCAGAACAAAACCATGAAGTTGTTTTCCTGAAGTACCTTTTTGGATTTGATCTAGGATTTGATTTTATCTTGAGAGTGGTGGTTTTATTTCTTAATCTCTGTTTCCTGGCCTGTTTGAGCCATCATAGTTCCTCTGATCATAACCTCCTTTTATGCAAATATCTCTACTTAGGCAGTAGGATGCAACCAGGTAATTTAGAAAGCTGTCAAAATACCCAGATACTTTTGGTGGTATAAATACTTTTAGGCAAGGGGGAAAAAAAGCACAATTAGAAAAAAATATTTATACTGTCAACACTTATTATTCCATCTTATTTGCAAAATTTTGTTGACACGTTTTGGATTTTTACATGAGGAAACCAAAGCTTTCTTGGTTTCTTCCCCTACCCCCCACTCCAGAGGAGGTGTCAGTGCAGTGAGAAGGCCAGTTGTTTCCGGCTTTCGTCTCTTCCCCTTGAGGAGGGGAGAGCGAGCAGTGGGCGTTCTGTGCTCTCGGTCAGTGCCGTCAGTCCCAGGGATGTCCGTGTTTCTCACATTCAAACAGGAGTACAAGGGCACTCAGAACTAACTTTGGAATAATTAACCTTTAGAAAATTTGTGTCACTGCTCCCTTTCATTATCACGGGTAATTGAGAATTGGCTGTGCTGGGAAAGGGCCCCGTCTCTGGCGTGCTTTGAGTTCTTTCTGTTCAGATTGAAGTGCCCTCTTCATAGGCTGGACAAGTCTAAAAGCAAATCATCACTAGCGGTTTTAATGCTGAGCTTCCATATCACGGTGTTCATATGTACTTCTAAGGCTGTTCGTACCTTGTAATGTTCACTTACTGTGTGATTTTTAAAACCTGTCTATTTTCAAGTTTTAAGCACAATGTTGATTGTTCTCTAATTTACCTTGTTTTCCTACAAACAGCTCAACTTTCCTCTCTGTATAATACTTTAGGAGAATACTACCTTGTAAAATAAACGTGATTTTTTCCTTTTTTACCAGCACAAATATGCTATTTTGAATTTTGGAATATCCTTCCTCCCCACCCCAC EMBV3_13048 CGTGATGCATTGCCAAGGGGAGGAAAAACCAAACTAAACATTACAAGAGATGTTCCCATA Gene BVT0101_017694 + 0 NULL GK000022.2:34421997-34580258 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128497 TCONS_00128496 1 XLOC_077897 Coding TCONS_00128496 XLOC_077897 Coding Coding KBTBD8 22:34577420-34590307 = TSS95837 4735 1 TCONS_00128496_5 601 0.00929250263991552 4 0.632857364581717 0.000434257805646247 0.000514118158955607 0.00025828694858668 0.000173687375155413 0.000525367397074225 0.000169445059891974 0.000222505960147061 0.00156892934866607 0.000947862728118525 0.00026436762624504 0.000154703975067359 0.000297971334114383 5.53055132702273e-05 0.000164399462463185 8.6056100821014e-05 0.00107211892961334 3.19822920466239e-08 0.000610687802390946 0.00040629592272399 0.000356652510459421 0.00023383364821809 1.29719768975363e-08 0.000455670446595304 0.000395159331671666 0.000504358919409795 0.000559770712678944 0.000297333861526889 0.000147905272429112 0.000156096022213198 6.10998436020325e-08 NM_001192696.1 KBTBD8 Bos taurus kelch repeat and BTB (POZ) domain containing 8 (KBTBD8), 0.0 3258 100.00 0.381203801478353 NM_032505.2 KBTBD8 Homo sapiens kelch repeat and BTB (POZ) domain containing 8 (KBTBD8), mRNA. 0.0 5391 85.75 0.991129883843717 TCONS_00128496_5 sp|Q8NFY9|KBTB8_HUMAN KBTB8_HUMAN Kelch repeat and BTB domain-containing protein 8; 0.0 1246 98.17 0.998336106489185 7 coding 0 0 0 0 0.083117398919826 0.452153633474159 0.0161396988784132 0.761746626075127 AGGGACGGCTTAGAAGAGCCGGAACCCGGGAGAGAGAGAAGCGAAATGACATTTCCTCTTTAAATAGCTGGAGCCCGGGCCGCGTCTAGAAATGGCCGCGTCGGCAGATTTAAGTAAGTCTTCCCCAACACCGAATGGAATACCATCTTCAGACACAGCCAGCGATGCCATGGACCCCTTCCATGCTTGCAGTATTCTTAAGCAACTCAAAACAATGTACGATGAAGGACAGCTGACAGACATTGTAGTGGAAGTGGATCACGGGAAAACATTTTCCTGTCATAGAAACGTTCTTGCTGCAATCAGCCCTTATTTCAGATCCATGTTCACTAGCGGCCTTACAGAAAGCACTCAAAAAGAAGTTCGAATTGTTGGTGTTGAAGCCGAGTCGATGGATTTAGTGTTGAACTATGCCTATACCTCCAGAGTTGTTCTGACAGAGGCCAATGTTCAAGCCTTGTTCACTGCAGCTAGCATCTTCCAGATTCCCTCCATCCAAGACCAGTGTGCCAAGTACATGATCAGTCATTTGGACCCACAAAATTCTATCGGGGTCTTCATCTTCGCTGATCATTATGGTCATCAGGAACTTGGAGATCGATCTAAAGAATACATTCGTAAAAAGTTCCTGTGTGTCACCAAAGAACAGGAGTTTCTTCAGCTGACAAAAGACCAACTGATAAGTATCCTAGACAGTGATGATTTAAACGTAGACCGGGAAGAGCATGTTTATGAGAGTATTGTAAGGTGGTTTGAACATGAACAGAATGAAAGAGAAGTGCACCTTCCAGAAATTTTTGCCAAATGCATACGTTTTCCTCTGATGGAAGACACCTTTATAGAGAAAATTCCACCTCAGTTTGCACAGGCTATCGCCAAAAGCTGTGTGGAAAAGGGACCAGCCAGTCCCAATGGCTGTACACAGAGACTTGGAATGACTGCATCGGAAATGATCATATGTTTCGACGCAGCCCACAAACACTCAGGAAAGAAGCAAACAGTGCCTTGTCTAGATATATTCACAGGAAGAGTGTTCAAACTATGCAAACCACCAAATGATCTAAGAGAAGTTGGAATTCTTGTATCACCAGATAATGATATTTACATTGCAGGAGGTTACAGGCCAAGCAGCAGTGAGGTATCCATTGACCACAAGGCAGAAAATGATTTCTGGATGTATGACCATTCCACCAATAGGTGGCTTTCCAAACCTTCCTTGCTTCGAGCCAGAATAGGCTGCAAACTGGTGTACTGCTGTGGTAAGATGTATGCAATTGGAGGGCGTGTCTACGAAGGTGATGGGAGAAACTCACTAAAATCTGTGGAGTGCTATGACAGCAGAGAGAACCGCTGGACTACTGTTTGCGCCATGCCTGTTGCAATGGAGTTTCATAATGCCGTGGAATACAAAGAGAAGATCTATGTTTTACAGGGAGAGTTTTTCCTCTTCTATGAGCCTCAGAAAGACTACTGGGGTTTCTTAACCCCCATGACTGTGCCTAGAATCCAGGGCTTAGCAGCTGTATACAAGAACTCTATCTACTACATAGCTGGAACCTGTGGAAATCATCAGCGGATGTTTACTGTAGAAGCCTATGATATTGAGCTCAATAAGTGGACTCGTAAGAAGGACTTTCCATGTGATGAGTCCATAAACCCATACCTTAAACTGGTACTTTTCCAGAATAAGCTCCATTTATTTGTTCGAGCTACTCAAGTGACCGTTGAAGAACATGTCTTCAGAACCAGCAGAAAAAATTCCCTTTACCAGTATGATGATATCACTGACCAATGGATGAAAGTGTATGAGACCCCAGATCGCCTCTGGGACCTCGGCCGGCATTTTGAATGTGCTGTTGCTAAACTGTATCCTCAGTGTCTTCAGAAAGTCCTTTAATGAATGGCAGGCCTTAGTGAGCTCGCCGGCATCTTGTGCTGGAGGAAACGTAGTCTTTCAGTGATAAGAAGTGCTGTCAGTATTTAAGAAAGCTGAAGAGAGTTTACACATGGAGATGGGTGCTGTTTAAGATGAGTGTAGGGAGGGATTTCTTTTCATCCATGTGATGTTTTCATTTCAGTAAGCAAAAGGTAACAAAGTGCAATTATCAGCATTTTTTTTTTCTGGTATAAAAGTAATCACATCATTCTAGAATTTCGTGATGAATAGTCACTGAGATACCAGACGAATTGACAACTATGCACTCTTAGAAGAGCAGTTGGGGTACTATGGATTAGAGACATCCAAAATAGTTTGATGTGACTTTTTATTTTAAATACGGGTAAAAATTTGAGGCAATATCACTAGGACTTTAGCTGTGACTTCTCTGCTACAGAGACGCACTAACTTAGATCCTCATTCTGAATATGTGTATATTTTGTGTACTGTTTTCACGTGTACTGGATTTAAATGTGTTATTAGTTTGAAGGAAAAACAAATCAGTCTCAGAAAGAGCTTTTAGCTGGATTGTTTTATATTTCCCATGTTAGTTTAAATTAAGCTAAAGTTTTAAAGTAGTTTTGTGTTGACAATTTTTTCAAGTGCTAACACTGTCTCATTTTTTTTTTTTTTTTTTTGAATCCCGAGAAGGGCTCAAATTCACAGGTGGCTGGTGCTAGAATAAGTTAACTCATGTGTATAGTTAGGTATATTTCAAATGTCTGAGCCTATGCTTACCTTTCAAATTGGTATGTTAGTTTCATGGCCATAGTACTTGACTTGCTGAACTCTTGTGATTTCACAAGATTCTCTGCTTACATGATGGCAAGCTATGGCTAGTTACTGGTCTAACTGGATTCACTCTGAGAATAGTGAGAAGACTATTATCCTCATTTTGCACTAACATGGGCCATTTGTCGCCTAACCTCCTTTCCATCCTTACCTGTCCATTCATTATCGGTACAATGAAAGGTAACTTATTTGTCTTCTGCACAGAGCAGAATGTGAAGTTTCAACTCCTAATTTGAAAATTCTGTTTTCCAGAAACATAAAACTCCTGCAATAGTCTCATTTAATGTCTTTTGCATTACCTATGACAATTAAAACCTCATTTTTAAAAAAGTTTTTGCACTTAACAGTTATGAATAGTTTTGCATTGAAAACCTTTGTTCTAACTGCAGGTGACTGAGAAGGAAAAGTGTGAGTGAATAGAAGCGTAGCATTATAGGTACTAAATCATTTTTCATATTTAACTGATTAATTTCTAACAGAAATACTCACAGAGAGGACAAACCAACTCATGTGTTATACCTAAGGCAGATATTTAGATCAGTAACTTATTTTTTACTCTTCCCGGAATAAGTAATAAAGGATATAAGTATAGCCAGAGTCTGTCCTTAACTGGAACATTTTGATTCCCTTAAAGAAAACAAACTGGCACAGTTTGTATTAAAAACTCTTGCACAAATTGTAATGTGATACTGTGAAACAAATCGAAAACATTGCCTCTTTGCATCACATACCTCGTTTTTTGGAAACTTTCCAAACTGCTTGTCATAGCCCTCTACAAGTAGGGAATGTTTCCTGAAGCCGAATTGAAAGTGGACAGCATTTAGAGAATTGACATTTTAAAATCCAGTCTTGGGAAGCTGGGTACGTGCTTTCTTCCTGCTGGCCTTGGTAGTGTGTCTATAGTCTCCTTATTGACTGTCAACTAACCAGCTATTTTTTTTTCTTCTCAGTTTTTCTTTCTCTTCGTGCTGTTTTGGGGCTTTTTCTGTGAGCATTTTGAAGCATCTACTCCGTGATGCATTGCCAAGGGGAGGAAAAACCAAACTAAACATTACAAGAGATGTTCCCATAATTTATTTTTGAAAGCTTTGTTGCTTCCTGTGACTTCCTGCCGCTTTTTGACAATCTCCTGTATTTATTTAGAACACTGTGTTACTTGAAAACATGACATTAGAACATTAACAATTTCCATGTGCCGTGTGATGTATAGGAGTACAATGTACTGTGGTTAATTCTGCAGTCGATTTATTCTATTGATCTGCACAACAGTTGATCCTCTAACAATTGATCCTATAACCGTTTATACTGAGGGTGTGCTCTAAGGATAGTGTGTCAAAGCCAAGGTTTAGAATTTGCTATGGAAGTATCAATAGAATATATATTGAATTTTGTATGAATAACTATTTGTTTAAATTATATAGCTGGGATATTTTGCCACTTTTCAGATGATTTCAGAAGAGGTTCTAGAAAACTAGGATTAGTAATATGTGTGGGTCTGTGTTTAGATATTTAAGGTACATTTGCTTAGTATGATGAGAATATAAGTAAAAGGCATAATGGGTACTATAGAATTAAAATAGAGGGTGATAGATGCCAGTCCCACTTGAGCTTTGTTTTTGCATTTGAAGAAAGTATGTAGCACTTTCCTATGTATTTTTTATACATTGAAAACTGGATGTGGTATAACTATGTTATAGGAAAGTAGAAATTGTATTATTTTCCATCTTTGTTTTCTGTTATCCTACAAAGTTGATGCTTAAGCATCAAGCTGATTTCACTGGTGCATGAGAGAAAGTGGATGTGATCTTGCAAGGAATCAGATTTTCTACGTGAAACAGTTTAAAATGGCATTCGATGTTCTGTGCTCAGGTATGTAGTTAAGTACTGTAGTCCTTTGGGGGCAAATGTGTAGATATTTTTAAACATTTTGCCATAATTGCACAATTTTTTGCATTTTTACCTGATGGCATTGTTTCTTGTAATAAAACTTTTTCTGACTGACAAGTT EMBV3_23697 TGCCTAACCTAGCTGGGGAAGTGGTGAAATTCAAATAGGATGGAAAGGTGTGACGTTGAG Gene BVT0102_192545 + 0 NULL GK000010.2:37918250-37946250 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14433 TTCCGGGGGCCTTCTGACCTGATCAAACACCGGCGCATCCATAGTGGACTGAAACCCTAT Gene GeneID:532314|ZNF275:XM_002699733:167_cdna Constitutive 0 NULL GeneID:532314 X GENE ZNF275 NULL zinc finger protein 275 EMBV3_14960 GAGAACTGATCGGAGGGTGTCTGATTGATCGCTTAGTTTTCACAGGCCAAGGCAACACGG Gene GeneID:100139141|SHROOM3:XM_002688359:167_cdna Constitutive 0 NULL GeneID:100139141 6 GENE SHROOM3 NULL shroom family member 3 EMBV3_23216 TGGATCAAAGACCCGCCTGGTACGACCTTCCTCCGCCACCCTACTCTTCAGACACTGAGT Gene GeneID:525908|LDLRAD3:XM_002693525:16_cdna Constitutive 0 NULL GeneID:525908 15 GENE LDLRAD3 NULL low density lipoprotein receptor class A domain containing 3 EMBV3_02534 TCTACACCCACGTGACGCCGCTGCTCTACCCGCTCATCTACAGCCTGCGCAACCACGAAA Gene GeneID:524903|LOC524903:XM_002687124:475_cdna Constitutive 0 NULL GeneID:524903 4 GENE LOC524903 NULL similar to olfactory receptor Olr804 EMBV3_36030 GCAGATGATCTGCTGCCTAGCAGTTTAAGGGAACAAGGTGAGCTATGACTAAACATAGCC Gene GeneID:783681|JAG1:XM_002692032:25_cdna Constitutive 2 NULL GeneID:783681 13 GENE JAG1 NULL jagged 1 (Alagille syndrome) EMBV3_41902 GGCCTCTGAGATGACACTCTACCATCTTCCCTGTCGCAGGTTTCACTCTTATTTATCAGC Gene BVV0102_016384 - 0 NULL GK000020.2:32064201-32606030 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38791 GAATTGTCATGCTTTGTCACCAGTGGGAAGTGAGCCTCTGTTTCTTTAGCTGTACAACCA Gene BVT0102_060028 - 1 EMBV3_13376 GK000009.2:53813750-53977190 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28414 TGTTTGACTCCCAGCAAGGGCGTTCACTTGTGTTGGTGACCGCTTGGTTCGCGATGTACA Gene BVT0102_099342 - 1 EMBV3_30475 GK000013.2:17885918-17906391 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165832 TCONS_00044598 2 XLOC_100672 XLOC_026238 Coding TCONS_00044598 XLOC_026238 Coding Coding - 13:17899985-17902291 - TSS32756 2306 5 TCONS_00044598_4 70 0.220728534258456 1 0 0 4.35751925265147e-06 0 3.60110648823374e-06 0 1.78387663600978e-05 0 0 1.71078344095372e-06 2.97375927245841e-06 0 0 2.48853578238157e-06 0 0 0.00105217924295168 5.45968773048705e-05 0.000284520271510951 0 0 6.58224331206648e-07 0.000720399146772288 0.000189634129003763 0.000429905618370324 0 0 0 4.16529758810153e-06 2.56133732531568e-05 1.79217634277741e-17 XM_005199721.1 LOC101908720 PREDICTED: Bos taurus ankyrin repeat domain-containing protein 26-like (LOC101908720), transcript variant X2, mRNA. 0.0 1229 95.96 0.332176929748482 TCONS_00044598_5 sp|Q811D2|ANR26_MOUSE ANR26_MOUSE Ankyrin repeat domain-containing protein 26; 1e-09 55.1 66.67 0.603448275862069 1 noncoding 0 0 0 0 0.0360263632782069 0.772349958095213 0.0371786092547407 0.527363320614433 GTTCTAAACTCTTTGCATGAATCTCATTTAAGCATCGCAGTGCTGTCCTGTGAGAGAACTACTTCTCTCTCTCCATTTTGTTGATGAGGAAATTGACGCACAGAGAGGCTGAGCGACAGCTGACAGAGTGAAAGTCAAATTCAAATCCAAGTTGAGCTGAATCTCAAGGTCATGGTCATTCTATTCAAGTAAATTGTTCTTTCATTACTGTGTTAAGCAGAGCTAATGCTAATATATAATGTTCTTTCTCCAGAAGGAAACGAAATATTTGTTTTAGAGCAATAGGAATATCACGCTATTGAATGTCTTCAGTCACAGGAACAATTGTTTATTTTGAAACAGTAACACTACAGTTTACTGAAAACTCCTCTTGCTTTCATAGGACTGCATTCCACTTGGCATGTGCCAATGGCCATTCAGCGGTGGTCACTCTGCTCCTGGAGAGAAAAATGCCTGCTTAACCTCCGTGACAATGAAAACAGGACCGCACTGATGAAGGTAGATGGGGCAGCGAACCGTGTCCACACGAGGTGGATGTGATCTAACTACTGAGACAAAAGTGAATTCATCTCATTTAGATATAGCAAACTGGTGAAGCCTGTGGCCTGTTTACTTTGAATTCCTAGAATTTACACTCTGTTTCTTGGCACAACACTAACAGGCCATAGAATGCCAAGAAGAGGAGTGTGTGACTCTTCTGCTGGAGCATGGTGCCGACCCAAATGTCATGGACGTCTCTGGGAACACCGCCCTCCACTATGCTGTCTTTTGCCAGAATATATCACTCACAGCAAAGCTGCTTTCCTGCGACACCAATATAGAAGCCAGGAACAAGGTATATCTCAACTATATTTACAAAATATTTGCGAAGCATTTTTTTAAACAAGAAGTGTTTTATTTCTAACTATGTAAATAGGTAAACTGAATAGTGTCCATCAAGCCCTGTTACCATGGAAACAACTCCAAAACCAATGCAGGGGGTGGGGGAAAATGTTGGAGCCCACAGAGAGGGCAAAGCTCTGTCTCCCAGCCAGCCGTCTACCCCAGAAGGAAGATTTCCCATCAGGACGTGCCCAGGAGTGGGTGGTAGGCTCAGAGCCCACAAATGATGAAGGCCTGGGAGGAGTGAAGTGATGTGAGGAGTGGCTGCTTCCACAGGCTCAGGGAATGGGTGCCCCTGGGGGTGGGTGGGAGGAGGAACCAGTGCCCATGAGGGGAGCCGGTTGAGTGCAAGTGGGCCTGGAGGCAGCAGGCCTGGAGCCCTGAGCCCTCCAGGACCCTGGTTCTGAGATCCGGCCAAGAGGGTCAGGTCATGTTTGACTCCCAGCAAGGGCGTTCACTTGTGTTGGTGACCGCTTGGTTCGCGATATACACCTTGGGGTCTCCCGCGCTCAGCCCCGGGCTGCTGCTCGGTGGGGTTGCAGCTGTGCGTGTGGAGCTGGTAATGGCGAAAACTTGCCTGAAATCACAACAGTTGTAGGTGATACAACTTAGGCCTTCTGACTCCTCAAGTCCAGAGTTCTCTCTATGGAAGGTAATATTCTCAGGACTTCCCTGGTGGTCCAGTGGTTAAGACTCCATGCTTGCTTCCACTACAGGGGATGCAGGTTTGATCCCTGGTCAGGGAACTAAAATCCCACACACTGTGTGGCCAAAAAAAAAAAAAAAAAGATAATATTCTCCCTTCCAAATCCAACAGAAAGATTCAAAGCAGCTTCTAAAACCCTCAGGTTTAAACTCTCTGTCCCTTTTTTAGAAACCACTGTGGAACATCATAACCAAAGCTCCAACTTCCAGTACTTAGAAAACGTAAGTGTAAGGAGAGCGGAAGTGTTAATCCTTCAGTCGTGTCTGACTCATTGCCACCCCAAGGACTGGAGCCCACCAGGCTCTTCTGTCCATGGAATTCTTCAAGCAAAAATACTGGAGTGTGTAGCCATGCCCTCTTCCAGGGGATCCTCCTGACCCAGGGATCGAACCTGCATCTCCTGCATTACAGGCAGATTCTCGACTGTCTGAGCCACCAGGGATGCCCATCAGGAAAGTGTAAACATGACATCACTAGATACTATACACTCAAAATGGAAAAAGCTCTAAATATTTTTGAATTCATTGGAAGTTTGAGCTGTATGAGAAGCAAATGTGCTAGCTCCTCCAAGGACTTGCTCTCAATGTAGAGCCAAGTCCCTCTTTCCCTACAAACCCAAAGGCCTATTCTCACAGGTCCCCAGTTAGGGTCTCTGATGCCTACAAATACCTGCTCCTCTCGTGGAACAGCAACCACTTACTACAGCAAGCAAGGATGG TCONS_00044599 TCONS_00044600 TCONS_00044601 TCONS_00044602 TCONS_00044603 TCONS_00044604 TCONS_00044605 TCONS_00044606 TCONS_00044607 TCONS_00044608 TCONS_00044609 TCONS_00044610 TCONS_00044611 TCONS_00044612 TCONS_00044613 TCONS_00044614 TCONS_00044615 TCONS_00044616 s 3' 3839 TCONS_00044599 TCONS_00044600 TCONS_00044601 TCONS_00044602 TCONS_00044603 TCONS_00044604 TCONS_00044605 TCONS_00044606 TCONS_00044607 TCONS_00044608 TCONS_00044609 TCONS_00044610 TCONS_00044611 TCONS_00044612 TCONS_00044613 TCONS_00044614 TCONS_00044615 TCONS_00044616 s 3' 3839 EMBV3_01246 TCAAAATCAACCCTGCAGTCCACAGGCGGGAAATGCTATAAAATCGAAGTTTCCTGGCCC Gene GeneID:512543|SLC7A6OS:NM_001075567:207_cdna Constitutive 0 NULL GeneID:512543 18 GENE SLC7A6OS NULL solute carrier family 7, member 6 opposite strand EMBV3_33524 TGAACCTGCTCAAGATGCCCAGCGTGGCCCAGTTCGTGCTCACGCCCAGTGTGGAGGTGT Gene GeneID:512522|KIAA0415:XM_002698163:635_cdna Constitutive 0 NULL GeneID:512522 25 GENE KIAA0415 FOXK1 hypothetical protein LOC512522 EMBV3_35276 AGTGAAAGTCACTCACCAGAATACTGGAGTGGGTAGCTGTTCCAACCCAGGCCTCGAACC Gene BVV0102_399457 + 0 NULL GK000001.2:95107020-95125674 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15930 ACGATACTTTGCAGGGACAGGTTTACACAGCGGGAGCGCGCCATGACAGCAGGTTCCAGA Gene BVT0102_035088 + 0 NULL GK000008.2:70414748-70425576 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225794 TCONS_00225793 TCONS_00225797 TCONS_00225790 TCONS_00225798 TCONS_00225789 TCONS_00225795 TCONS_00225792 1 XLOC_137842 Coding TCONS_00225797 XLOC_137842 Coding Coding KIAA1967 8:70414522-70429168 = TSS168964 3888 1 TCONS_00225797_7 916 21 0.735950836462957 0.00863149369817749 0.00362356330229237 0.00343209478486172 0.00409786818097577 0.00433895147467213 0.00208356906288566 0.00073781362724039 0.00393394259412176 0.00280046331411951 0.00025222797780866 0.000540823397176049 0.000533956722582311 0.00132118322343662 0.00191208844724753 0.00158696550791415 0.00997335693200395 0.00134735767858083 0.00638248137951321 0.00350948032618074 0.00326239656589073 0.000384431694424215 0.00299316872019537 0.00270902490437105 0.00199023218297241 0.00304180821819572 0.00256501449606746 0.00232449759840714 0.00167267401340143 0.00208719868674586 0.0020913691380171 NM_001075298.2 KIAA1967 Bos taurus KIAA1967 ortholog (KIAA1967), mRNA. 0.0 7012 100.00 0.999742798353909 NM_021174.5 CCAR2 Homo sapiens cell cycle and apoptosis regulator 2 (CCAR2), 0.0 4493 85.63 0.999742798353909 TCONS_00225797_7 sp|Q8N163|K1967_HUMAN K1967_HUMAN DBIRD complex subunit KIAA1967; 0.0 1553 89.06 0.998908296943231 2 coding 0 1 1 1 0.0909575676810607 0.464309057467237 -0.00538281296409314 0.914659932321608 TGGTGGCCGCTGAGACGGGAGCCGAGGCACGGGGAGCGGGGGAGCAGGAGGGCGGGCGCGCAGCCGGATTTGCGTTCGCCTGGCCGCGGAGCTGTCTTCTCACCAGCCCGTCCGGGGAACAACGGGCCGGGCTTCCGGGGAGAGGGCCTACACCATCTCCTCTCCGGCACCAGCCTCCTCCATTTTTCCGGGCCTTGCGTGGAGCTTTTTGGCGGATGTATTTGAATGAATGAATGTCACCAGGGCTCTTTCCAACCCTTCACTCTCCCCAACCATCTGAGGGTGGCGTGGCATAGTGAGAGGAGCGCTGAGTTGTCGGGAGACCTGGGTGTTTTTTCCCAAGACTCTGAAAGAGGACAGCATTCCCAATGTCACAGTTTAAGCGCCAGCGGATCAACCCGCTTCCAGGGGGACGCAACTTCTCAGGCGCAGCTTCGACATCCCTTCTGGGCCCTCCTCCTGGTTTGCTCACTCCTCCTGTGGCCACAGACCTGTCCCAAAATGCCAGGCACCTTCAGGGTGGAGAGAAACAGCGGGTCTTCACTGGCATTGTTACCAGCTTGCACGACTACTTTGGGGTGGTGGATGAAGAAGTCTTTTTTCAGCTAAGTGTGGTGAAGGGCCGGCTGCCCCAGCTGGGTGAGAAGGTGCTGGTGAAGGCTGCATACAACCCAGGTCAGGCAGTGCCCTGGAATGCTGTCAAGGTGCAGACGCTCTCCAACCAGCCCCTACTGAAGTCCCCAGCACCTCCCCTTCTACATGTGGCAGCCCTGGGCCAGAAGCAAGGGATTCTGGGAGCTCAGCCCCAGCTGATCTTTCAGCCTCACCGGATTCCCCCACTCTTTCCTCAGAAGCCTCTGAGTCTCTTCCAAACATCCCACACACTTCATCTGAGCCACCTGAACAGGTTTCCTGCTCGGGGCCCTCATGGACGATTGGATCAGGGCCGAAGCGATGACTACGACTCCAAGAAACGCAAACAGCGAGCTGGTGGAGAGCCTTGGGGTGCTAAGAAACCAAGGCATGACCTGCCTCCTTACCGAGTCCATCTCACTCCCTATACTGTGGACAGCCCCGTCTTTGATTTCTTAGAACTCCAGCGCCGTTACCGCACCCTCCTGGTTCCCTCAGATTTTCTGGCCGTGCATCTGAGCTGGCTGTCGGCCTTCCCTGTGAGCCAGCCCTTCTCTCTCCATCATCCGAGCCGCATCCAGGTATCTTCGGAGAAGGAGCCAGCTGCTGATGCTGGTGCAGAGCCCCCCCCTACAGACAGCGACCCCACCTACAGTTCCAAGGTACTGCTGCTCTCCTCCCCGGGACTGGAGGAACTGTATCGTTGTTGCATGCTGTTCGTGGATGACATGGCTGAGCCACGGGAGACCCCGGAACACCCTCTGAAGCAAATTAAATTTTTGCTGGGCTGGAAGGATGATGAGGCAGTGCTGGTTGGTGGTGAGTGGTCTCCTTCGCTGGATGGCCTCGACCCCAAGGGCGACCCACAGGTGCTTGTCCGCACTGCTACACGCTGCGCGCAGGCCCAGGCTGGCATCGACTTGAGTGCCTGCACCAAGTGGTGGCGCTTTGCTGAGTTTCAGTACCTGCAGGCGGGACCCCCGAGGCGGCTCCAGACTGTGGTGGTGTACCTGCCAGACATCTGGACCATCATGCCCACTTTGGAAGAGTGGGAGGCCCTGTGCCAGCAGAAAGCTGCAGAGGCAGCTCCCCCGCCCCCGGAGGTGCCAGTGGAAACAGAGCCTACAGAGCAGCCGGCTGATGGATCGGAGCAAGCAGCAGACACCTCTAAGAGTGCCGAGAATCCAGAGGTCACCGCACAGCAGGAAGTGGACACTGACCTCCCAGAGGCCCCCCCACCCCCTCTGGAACCTGCTGTCATGGCGCGCTCCCGCTGTGTAAACCTGTCCCTGCAAAGTATCGTGGAGGACCGGAGGCCGAAGGAAAGGATCTCTTTTGAGGCCACGGTGTTGGCTGAGCTGTTTCTGGAGATGCTGCAGAGGGACTTTGGCTATAGGATTTATAAGACGCTCCTGAGCCTTCCTGAAAAGGTCGTGGCCCCGCCTGAGCCTGAGAAGGAGGAGGCAGCCAAGGAAGAAGAAGCAGTCAAGGAGGAGGCCAAGGAGTCCAAGGATGAGGTACAGAGTGAGGGCACAGCTGCCGAGGCAGACGCCCCGCCGAAGGAAGATGGGCTTTTGCCCAAACCCCCGTCTTCTGGGGGAGAAGACGAAGAGAAACCCCGGGGTGAGGCGTCTGAGGATCTGTGTGAGATGGCCTTGGACCCAGAACTGCTGCTCCTGAGAGACGACGGGGAGGAGGAATTTGCAGGAGCCAAGCTGGAGGATTCCGAGGTCCGGTCGGTTGCTTCGAACCAGTCAGAGATGGAGTTCTCGACCCTTCAGGACATGCCCAAGGAGCTGGAACCCTCTGCTGTGCTCCCTGTGGACTGTCTTCTTGCTTTCGTCTACTTTGACGCCAACTGGTGTGGCTACTTGCACCGGCGAGACCTGGAGAGGATCCTGCTTACCCTTGGGCTGCGGCTCAGTGCAGAGCAGGCCAAACAGCTGGTCAGCAGGGCGGTGTCCCAGAACATCTGCCAGTATCGGAGCCTTCAGTACAGCCGCCCGGAGGGCCCAGACGGGGCACTCCCTGAGGACCTGCTCTTCGGAAACCTGGACCTGCTACCTCCTCCCGGGAAGAGTGGGAAGCCGGGTACGACCCCAGTGGAGCACAAGGGCCTGGTGTCCCACAACGGCAGCCTCATCAACGTGGGGAACCTGCTGCAGCGTGCGGAGCAGCAGGACAGCGGGCGGCTCTACCTGGAGAACAAGATTCACACACTGGAGCTTAAGCTGGAGGAGAGCCATAACCGTTTCTCAGCCACTGAAGTGACAAATAAGACACTGGCAACGGAAATGCAGGATCTGCGGGCCCGGCTGGCCGAGGCTGAGGAGATGGCCCGGACAGCCGAGCGACAGAAGAACCAGCTTCAGCGGCTGCTTCAGGAGTTCCGAAGGCGCCTGACCACCTTGCAGCTCGACACACAGAGGATGCTTGAAAAGGCTGACAGCTGGGTAGAGAAGGAGGAGCCAGCACCAAGCAACTGAGGGGCCTGGTGCAGGAGCCCTATGAGGTCAGCGATGGAGCCTGCTGAAGTTAGAGCCCAGAAAGCAGCCAGAACAGGACCTGGGAGCTGGAGGCAGGGGTGGCTGACCTGGCGGCACTCGGCCTCTGCAGAGGCGCTCAGGCCGTCAGGGGGGGGTCTGTCTGTGCCACGCGGGTCGGATGAGTGAGGAAGCCGGTTCCACGCGCAACTAAATCCAACATCTTGTGCACCCCTCGAATGTCATTTTGCCCTCTACTTTGGGATTCCTCCTGGGGCCCTTTCGTCTTGTGCTGACTTTCTCCTGTCCTCTTCCAGTTTAGAATAAGACAGGGCAGGAAAAGGCTTTTCAAGTCTGTCATAAGGTCTGATGCCAATAAACTAAAGGAGCAGATGTGGAATCTGGTTGGGGGTAAGAACCCTTATGAATGGCACAAATCCTGCCAGCTTCCAGGAGCAGGTTTTTGGGGAGGGGGCTCCCTGGCCATCACGGGAACAGTGTCAGTGTTAGCGAGCGTTTGGTGTGGGGCTGTGTCTGCCAGTCAACACTGTGTTCAGCTGCCCCAGGTGTGCCAGAAGAAACCAGCACCTGTCCCCCGGCTCCCTGTGTTCAGAATGTGGTATTGGCTCTGGCCCGGCCTTTCCCCTTCCCCACAAGTCTTGCCTCTTTCCATTAATCCGTGGTTTCAGTTTGACTTTGTATATAAAGTTGGTTTTCTTTCTTTTTTTTTTTTTTTTTTGGCTTTTTGTTTTTTAAATAAACCAAAGTCAAA EMBV3_43419 AGGAAGAACGAGTGGCCGCTGGACAAGATGTGTCTGTCCGTGGAGGTGACCAAGAAGAAC Gene GeneID:788092|LOC788092:XR_084624:96_cdna Constitutive 0 NULL GeneID:788092 19 PSEUDO LOC788092 NULL similar to dynein, axonemal, heavy chain 17 EMBV3_31152 ACAGGTGTGGACGACACTGTCACTGTGATACTCCAACACGGTGTCCGTGAGTGGTACCAA Variant GeneID:617564|DHDH:NM_001076469:412_cdna 678^733 2 EMBV3_04185 GeneID:617564 18 GENE DHDH MGC139501 dihydrodiol dehydrogenase (dimeric) EMBV3_28488 TTGAACTTTCAGAGATGCAAACATGCCCCTGGATGTCAGCTGTTGTACCGCACTACTGTA Gene GeneID:100295432|LOC100295432:XM_002686919:151_cdna Constitutive 0 NULL GeneID:100295432 4 GENE LOC100295432 NULL hypothetical protein LOC100295432 EMBV3_12022 AAGATCAACTGGGCCATGGAGGACAAGCAGGAGATGATCGACATCATCGAGACGGTGTAC Gene GeneID:535457|TXNL4A:NM_001076060:26_cdna Constitutive 1 NULL GeneID:535457 24 GENE TXNL4A MGC133511 thioredoxin-like 4A EMBV3_10964 TTGAAAGTTGCCCCTGGATTGTTGAGCCCAACCTACCAAGTTCTGAGCAGAGAAGGAAGC Gene BVT0102_349238 - 1 EMBV3_25691 GK000015.2:72478870-72759821 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37621 ATGAAAAGGAATGAACTAACCGACCCCATCATCTTCTCACCCTGCCCTCACTGCATTCCG Gene GeneID:512622|JMJD2A:XM_002686436:424_cdna Constitutive 1 NULL GeneID:512622 3 GENE JMJD2A NULL similar to JmjC domain-containing histone demethylation protein 3A (Jumonji domain-containing protein 2A) EMBV3_27352 ATCGGCAACAGCTCAATAAAAACGATGATCCTGCCCATGCATCCCGCCCTGTGCCATCTA Gene GeneID:614978|LOC614978:XM_002688434:61_cdna Constitutive 1 NULL GeneID:614978 6 GENE LOC614978 NULL similar to RIKEN cDNA A930005I04 EMBV3_24771 AACGCCATGTAATATATGTAGCCCTGATCAGATTTATAGCACCGTATTTCTCCTTGGGTC Gene BVV0102_031198 + 0 NULL GK000010.2:103971001-103984711 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015554 TCONS_00015559 TCONS_00015566 TCONS_00015567 TCONS_00015551 TCONS_00015560 TCONS_00015553 TCONS_00015562 TCONS_00015565 1 XLOC_008511 Coding TCONS_00015554 XLOC_008511 Coding Coding CTDSPL2 10:103899392-103975135 j TSS10958 7158 1 TCONS_00015554_3 353 0.0592344230231908 15 0.905693010482955 0.000902877679122336 0.000534654320280005 0.000297225855194625 0.000103190026215696 0.000119166662645857 0.000150021897439955 0.000217545120269642 0.000154627766425279 0.00020696920290351 7.14736328949431e-05 7.02429519055472e-05 1.21126731318412e-05 1.24274917106239e-05 2.3429216067364e-06 0.000230230237328264 0.000544129453788489 0.000519080130368935 5.54536660008115e-43 7.0951108906011e-05 0.000115388090121616 2.22212518171537e-05 8.00276939720402e-05 1.9246313281878e-05 0.000258010121417202 0.00027129863289079 8.46884145039005e-05 0.000173333133859977 4.12112936536626e-05 1.87051543467469e-58 0.000103984574498662 XM_005212210.1 CTDSPL2 PREDICTED: Bos taurus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 (CTDSPL2), transcript 0.0 9156 100.00 0.709136630343671 XM_005254440.1 CTDSPL2 PREDICTED: Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 (CTDSPL2), 0.0 4466 89.67 0.468706342553786 TCONS_00015554_3 sp|Q05D32|CTSL2_HUMAN CTSL2_HUMAN CTD small phosphatase-like protein 2; 0.0 642 96.69 0.937677053824363 0 noncoding 0 0 0 0 0.0325859808418493 0.816929245487275 -0.0230653933302424 0.700248048279723 GTTTTTTTTTTTTTTTTCCGGCTGTTTTTTTTTTTTTTTTTGCCGCCGGAGCCGCCCGCATTCCTTCCCTCCCTCCGCGCGGGGTCGCGGCGGGAGGGGGAGCGGGGAGGCAGGGCGCCTGCGCGGGGCAGCCGCGTTCCATCCGGGTCCCCGTCCGTGCGGTGCCGCAGGTCGGTAGGCGGGAAATGGCGACTGGCTGAAGGAGCTGGTTCTGTTGCTGCTGCGGGCGAAGCGGGAAAGACACCACACGCTGCGCAGCCGGGGCCGGCGCCGGAGCCCGGGGACACTTCTCTGTCGTCACATTTTACATGTGGCACCCATAAAAGATGAGGCTGAGAACACGGAAGGCTTCTCAGCAATCAAATCAAATCCAAACACAACGCACTGCCAGAGCAAAGAGGAAATACTCAGAAGTTGATGACAGCCTGCCTTCAGGAGGAGAAAAACCACCGAAGAATGAAACCGGCTTGTTGTCTTCAATTAAAAAATTCATTAAAGGAAGCACACCCAAGGAAGAGAGAGAAAATCCTTCAAAACGGAGTAGAATTGAACGTGATATAGATAATAATTTGATCACATCAACACCAAGAGCAGGAGAAAAGCCTAACAAACAGATATCTCGAGTAAGACGGAAAAGTCAAGTAAATGGAGAAGCTGGTAGTTATGAAATGACAAACCAACATGTAAAACAAAATGGAAAATTGGAAGATAACCCTTCCTCTGGCAGTCCTCCAAGGACTACATTGTTGGGGACCATATTTTCTCCTGTCTTCAACTTTTTTTCACCAGCAAATAAAAATGGAACATCAGGATCCGATTCCCCAGGACAGGCTGTGGAAGCTGAGGAGATAGTAAAGCAGCTTGATATGGAACAGGTGGATGAGATCACTACCAGTACTACTACATCAGCTAATGGAGCAGCTTACTCAAATCAAGCGGTTCAAGTGAGGCCATCAATAAATAATGGTTTAGAAGAAGCAGAGGAAACAGTTAATCGTGATATACCACCCCTTACAGCACCAGTAACACCAGATAGTGGATATTCATCCGCCCACGCAGAGGCCACCTATGAAGAAGACTGGGAAGTATTTGACCCCTATTATTTCATCAAACATGTTCCACCACTGACAGAAGAACAACTAAATAGGAAGCCCGCTCTTCCATTGAAGACAAGAAGCACACCAGAATTCTCCCTAGTTTTAGACTTGGATGAAACACTAGTACACTGTAGTTTAAATGAGCTAGAAGATGCAGCACTTACTTTTCCAGTCCTTTTCCAAGATGTCATTTATCAGTTTCTGTTCCTGCAGATCCACCAATTCAAGACTCTAGGTCATCTCACTCCCTCTTCCATCCAGAAGATGACTTCTATCCACAAGCAGGACTGAATCAAAAGACAGATTTTTCACTTAGCTCTTGAGCTGAACCACCTCCTCAATGACCTTCCTCTGTCTCCATCAAGAACTGGAGCTCAGTTTTTTGAAGATGTAATAGAGCTACCCAGCCCAAACGTGGCTAATTGAAGACAAAAAGAAGATGCCTCATATGTTTCACCACAGTGCCACCAAACGTAACTGTGTTGTCCAACTCCTCATTCTGTAAAGTATGGCAGGGGCATCTGATTTTTGACTCTGTTCACCAATAAGACTTTAGCCAGTCAGTGGCTTTCTGAAGATCAGTAAAATCAACAAACTTTGGGTCAGCTGTCCAGAAATCAGATTGTGGTTTACGTGAGATTAAGACCATTCTTCAGGGAGTTCCTGGAACGAATGTCTCAGATGTATGAGATCATTCTTTTTACTGCTTCTAAGAAGGTGTATGCAGACAAGTTACTGAACATACTAGACCCTAAAAAGCAACTGGTCAGGGCTAGGGAGGCGGTGTGGTCTTCTGGTTAGAGCAAAGGACTGGGAGCCAGGAGGACCCTGGGTCCCATTGCGGGGCTAACCGCTGACTTACTGTGTGACCTTGGGCAAGTCACTTGACCTCCTTGTGCCTCAGTCAACCATCTGGAAAATTGGTTAAAAAGCAGGACCTCGATGACAACCAGATGCTGCATCTGAACTGAGCTCTCCTGGGCACCGGCTTTTCCGTGAACATTGTGTTTGTGTACAAGGAAACTATATAAAGGACTTAAATATCCTTGGAAGAGATCTTTCAAAAACTATAATAATTGACAACTCACCGCAAGCCTTTGCATATCAGCTATCTAATGGAATCCCTATAGAAAGCTGGTTTATGGATAAAAATGACAATGAACTGCTAAAATTGATCCCATTTCTGGAGAAGCTAGTAGAACTGAATGAAGACGTTCGACCGCACATCAGAGACCGGTTTCGCTTGCATGACTTGCTGCCCCCCGATTAAGTACAAAGACTTGTCAGATCACTGAAGGGGGAGAGGATGCAGGACCCTTTTGGACTAAGACAAAAACATTGCCATTACTGTTGAAATTTTGCATTTTTGTACCCCGTCTTGCTTTTCTTATCTTGGTGCCCAATAATAATCAAGGGTTACAGAAAGAGACTTTCTCTCAGATTGAACACACACAGTAGGTAGGCGAAAACAGAGGCGTCTTCAGAACTAGTGCAACTCCAGTGAGATTTTTTATGTACAGGACATCTGCAGTTTATAAAGAATTCTGTTTCTGCCACCAGCAGTTTGACCTGTAGTCACACAGGATTTTATGATAATAACAGAGATGAAAATGGACTTTTATTTTCTCTCTGTTTGGTGCTCTAAGTGGGTTTGTAGCCACTTTTCTGTTACTTTAAAATTCTCATTTCAACAGGAATGGCCAGTAAAAGTTGTTTTATTTTTCCTGTTAAGGTTTATAACCTTTTTACATTTTTGACCTGTATTATTAATAGATTAGAATTTCATTATGCATTCCTTTTAGTTGAGGCGCTTCATAGTTTTCTGGAAATAGTAAATTTTTAGTTTTTTATTATACATTTGAATGGCCGTTTTCCTGCTTTGTCTGCCTGCATATTGTATATTTGTTTAAAAATACCCTCTACTTTTAGTCCATGTAAGTTTCATTTAGAGAGAACATGCATTTATATTTTGTTTCTGTAATATTCTACTGTAGGTGAAATCTTTTCAAAATTCAAGAGACTGGGTAGATAAGAATATATGAATGACTTAATATTCAAAAGATGTAGACCATTGTGATGGCATGTGTTCCGAGTGGTACTATCTCGCAGTGGCACACAGACGTGATGGATAAAGGTATACCTCAGACCTCACTGTGCTCACCAGTCTTTGAGGAGGATGGATTGGGCCACCTGTCGGGCTTGATTTGGTTACTGATGCCTTTGGTTTTCTCCAGGAATGAAGTGTTCAGCACAGTGATTCAGTATTTTTAGTTACTTTGCATGGGCTGGTAGTACCTCTGTTATGCTCTCGGTCACAATCAGTTTAAGCTCCGTGTAACAGTCTTGGTACCTCGCAGCAGCTGTGCATAACCCTGTGTGCAGTAGACTCCCGGGCCACCAGTGCAGTCAGTACGCTCTCATAGTGGTTTTCTATGCTATATGGAAATAGTCTTCAAGCCTTGGTTCTCTGATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTGTAATCTCTTTTTCGGGAGGCTTTTTATGGAGGTAGAATTTGTAAAAGTTAGTATGCTTTGCCTCTCAACTGCATTAACATGCCACAGGCTCAGACTGTTTTTGTGTAAAGGATGTCAAAGAACGGCACTTTTTCTAAAGAGAAGTTTGATATTTTGTATGCTTGTTAAGAAAGTACAGTATTGGAAATTAAAGGTGGACAACTGATAATTGAGGAGTATGTCACTTAATTTTTTATGTATATTACCTGTTTACTTGTACAACTTATTGTACAAATTACATGCAGCTTCATTTTCAAATGAATCCTTAAAATAAGGAAATCTTTTTAGGAAAACATTTAATTTTTGTATTTTTGATTTTAAAGGCATGAGTTATGTCAATTTTCAGTGTATTAATGAAGATTTTAACTTTTCATCAGGTTGAGTGTTTTCTTACTATATTATCTGTTGTGTATGTAGTTAGCATATTGTGTCACTGAACTGTTTAAAAATCTAGCATGTAGAGCAAGCCTGTTTTGTGGAAAATCCTTATTCATTAAAAAAAATAATCATGGCAGATTTTCTGCAAAAAAAAAAAAAAAATTTGCAATTCAGAATATTGGGGGTTTTTTTGTTTGTTTTTAATTTAAAGAAAGGTATTTTGCTTGCAGGAAAAAACAATACAGATTCATTTTAATGAGAATCTTTGAAATGTATTTATCTTTAGGGCATCTGGGCATCTTTATGCTGTTTGTCTCCTGTCTTTCTTGAAATAAAATGTACATACGTTACCTTTACATATGCTCTTGCTCAAAATTGTGAACCTGGTTACATTTCTCCTTGCTCCCTTTTTATGTTCAAACAGCAAAACCTATATAAGATCTAAACTTTCAGCTTACATTATAATTGCTGAAAGCTTGACCAATTAAGTACATATACTCTGTGGGCTTTCCCAGAACTAGAGGGGAAATGGAAGCACCTGTATAAAGCATTGTGCTGACAGGCACTTTAAAAACTACTTCAACCACCTTTTATTGGTAAAGCTGCTTTTGATCCCCTGCTGGAGAGTTCCTTTAAGTCAACTGACAAATGAATCAAGCCTAACAAGATTCTGTAAAGAAATAAGCTAAGGGAAAATTTCCTATGGCCTGAGAAAATTTCTTGATAGCAATTTAATATATTTTTTTCATTATTTGATTTGAGTAATTTTAAATTTGTTATTAATACAAAATTTAGAATAAGTTAGAGACTGTTATCCAGCTTCCTTCCTCTTTAACATGTTTTATTAGTCCTTCTTTCCTTTATCTGTTGGTAGATGTTATCTTAAACATTTCCGTTTAGTTAAATGGAGGTGTTTATGAATTGATGTGCCCAGCCCCTTCAGTTCACACAGGAAACGTGAACTCTTAGAAACTGACCATAGTAAATGCAGGAGAGATGGGTACCTGATAATGACACAGAAAAAGTGACCTATATACACATTACAACTCTGAAGTACATACTATAATTGTGATATTTCCAGTGGTAAATGTCTGACTTTTAAAGACATTCTTTTAAATATTTGTATTATTGTTAGGATGTTTTAATCAGTTGTGTTTTTTAACGCCATGTAATATATGTAGCCCTGATCAGATTTATAGCACCGTATTTCTCCTTGGGTCTTAAAGTTGACAACAATTTAAAAGCATAAATTGTTTTATATTAGCTAGTATGTATATTTATTTACCCAATGGCTTTATCTTATTTCCCAGAATTTGGAGGGGGATTTGTTGAAAGCATTGTAACTTCTATAAATGGCTATTTTCTTGTAACTGTTAGTGAAAATGGATGTGTATATTGTTTTTTTATATTTCTCTGGTTTTCCTGGTTTGTTTGTTTTGGGGGTTTTGGGGGGGATGGTTAAACATAGAATCATTTTTTTTAAAAAAGGTTATCTTTGGCCAATGACTTTTTCAATTAGATATTTCTTTCATTTAACCATCTAAAGAAGTTTGTTTTTCATTGTTTTGTTCAGTCAGCTTCCCTGAAAAACAGAGACTTCATCTCATCAATGAAGAACGCATTTCATTATTCCTACAAATCTTTACAGCAAGCACAGACTTCTTCATAAGGACCAGATCTTTTGCACGTCTTCTGTCAGTCACACAAAGCTGAGATGTACAGGACACTGGCGCCTCCTTTACCTGCACTGACACAGTGGTGTTACGTACTGCATCGTTAGCTAGTTAGGGCTTTCTGACCCGGATTCTCTCTGTCTTCCTAGGTATTTATTTGTTGTCTCTTTTAATCTCTTGTGTATCTAAATTAACTTAGTGTTAATAGTCACCCACCGAATAACTATGCCAAGCAACTAGGAAAGAATGTTTATTTTATTTCCCCTTATAGGGGAAGAGTGGACTGGGAACAAAAGTGTATGGGCCAAAAGGCCTTAGGTTGTCATTCATCCACTTTCTTATTCCTCTCATGAAGCTGTTTTTGAGTATAATATTTTTTTCAGTGCTTATGTGCTTGATTATGTCATTATTTTTCATGTCTTCCCCTGAGTTAAAAGCCTACTAGGAACCTGTATAAAATAGAATTTGAAATTTCAGAATAAGAACCACAGAACTCGGTACGTTATATCTAAATGCTACGTAAATTATAATTGGAATCCACGTCTCAACTCACTAGGATACATTTTTATAAAATGTTTCTCTGTATCTTGAATTAAAATTACTTGACCAGAGGCAGAATTCGAGGGTTGTAATGCATTTTGAGGAATTTTTAAAAAGGAGAGTTGAGAGCAAGAGGGTTATACTCACTTGATGGTTTTGATATCGGTGTTTAAAATACATCAGTGGCTCCCGAACCTGATTGCTCCTTTGTGTCACTCTGTGGAGCTTTTGAAATACAGCTTCCTGAGGCCTTCACCTCTGCAGAATTGTCTGAGTCTAGAGTGGGGCCTGAGAAGTCCGTGCTTTTTAAAAGCTCTCCAAATGACTCTAATAGATTTGGGCAATCACTGCTCACTGTGACAGTGGTTTGAGAGTAGGCAACAAAATAAAGTTTACCAGATATTTCTTTGTGGTGGAGTTTACCAGATTTCACGGAACTTATTCAGGATACTTGGAGGAATAAAGAAGATTGAGGCTACTGCTCATTATCATTGTCTTTCATACTTTTTAAGAGTTTGCGTTTCTAGCACTTGAAGTAGTTGATCATATACACAGCTGAAGGACATATCCCTGAATGAGACCATTATATATATTAACTGTAAAATATTTCACTATTTTTTTATTTTATAAATCTTTGTAGAAATGAGCAATGAAATATACTTTCATCTTTTGAAATGGGATTTTCAAGGCGGTGTCCTTTTGGCATTAAGGTCGGGGGGAGTTAGTATTCTCTCTGCCTTTTTCCACATGAATTGATATAAATCATGGACATTTAAAACACTCGATTTAATTTCTACATATTTACTATGCAGTATAGCCGTGAACAAGTAATGTAGATTTAGTTTTCTCATCTTCAAATGCCCTGATCACCCTACCTCACAGGGTTGTTGTGGGGATAAATAAAACTTTTATGGAAGCAC EMBV3_40897 CCTGCACCAGTGAGAGGAGAATCGCAAAGACAGCAGCAGAGCAACAGCAAACAGCACAAA Gene BVT0102_017221 + 0 NULL GK000025.2:21488492-21498276 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144753 TCONS_00144751 TCONS_00146507 TCONS_00144749 TCONS_00144752 TCONS_00144755 2 XLOC_088638 XLOC_089121 Coding TCONS_00146507 XLOC_089121 Coding Coding PALB2 25:21488393-21540630 j TSS109515 4408 1 TCONS_00146507_3 279 5 0.915709472394517 0.0265296709156238 0.0208825325325903 0.0239000461952179 0.0182433179605097 0.0194838425261923 0.00840122337657188 0.0136168767203929 0.0136043014555695 0.017654872382674 0.00195535701020909 0.00135117482576448 0.000247974347647779 0.00302205030446454 0.0088226974733404 0.00335593622662329 0.000829329088499553 8.43043387012458e-105 0.000858587701425699 0.023732519118141 0.0278648405891184 0.0130898243260007 0.000721934774055564 1.21257861542827e-05 0.000394109967353751 0.0319993259307085 0.0272988924937608 0.0199534476301224 0.000397418152494169 0.000395192884966592 0.000253197975301633 NM_001205615.1 PALB2 Bos taurus partner and localizer of BRCA2 (PALB2), mRNA. 0.0 2271 99.92 0.286070780399274 NM_019116.2 UBFD1 Homo sapiens ubiquitin family domain containing 1 (UBFD1), mRNA. 0.0 1568 75.05 0.519056261343013 TCONS_00146507_3 sp|Q86YC2|PALB2_HUMAN PALB2_HUMAN Partner and localizer of BRCA2; 4e-88 287 64.03 0.899641577060932 0 noncoding 0 0 1 1 0.462055420108 0.335981135368395 -0.146673212706586 0.0224642960287003 GATGCGGGAAAGTTGAAAGAAAAATTAGCATTCCTGAAAAGGGAATACACCAAGACATTGGCCCGCCTTCAACGTGCCCAAAGAGCCGAGAAGTTTAAAAATTCTCTTAGGAGAACAGTGGAAGAACAAGACTCCTCACTCCAGCAGGAAGTTTCAACACAGCTAACCCACACAGAACCTAAAAATACAGTATCTCCTCGTGACACGTTGCAAATCAACACCCATGTCGATGAAGAAACTGGAGAAAAGACACCCAGCTCACTTGACATTAAGCCTGAGTTGTTTAGCTCTGGACGTGTCTCAGTGGAAGGATCACGCATACAAGGATCAGATGATAATCAGGAACATTTTCCTTTCAGGGTCAATGGCCCTGATGCTAAGAAAAGGCAGAATAAGCTGCTGGGGAGAAGAAAGAAAGAGGAGAGAACATATATTTCACAGGAGAGAGAATCTCTCTCTGACATTGATTCGCTCATACTCTCTGGAAAAAGACTAAAGGAACAGGAAAAAATGAATAGAGAAAATCCTAGAACACCTGTAACTGAACTAAGAACTTACCCCCTTTCAAGTCCTAAATGTGCCATTCCAAATTCTCCAGCACCAGTTACAGAAACTAATGTAGGGAGTGTATTAATTTTACCAAGCACCAAACCACAGAGAGATGTTGATGCCCTCCTTAGAGGAAATGATTTCCCCAGGGCGACTACTCTTCCTCTGCCTACACCTTCAAATAGCAGTAACAGTCAGCGCCTCGAACACAAGTGTCCTAAAAGTAACTGTGAACTTACTACTCACAGCTTAAGAAACATTAGCTCTGCTTCACCTGTAAACTTAGAGGTACAGAAGAAAAAAATTACTGTCTCTACAGATAACCCAGAGGTAAACAAAGCTGGAAGTACAAGTGGCCAGGCAGCTAGAAGTCCTAACTTAGAGGCAGATAATTCATGTTTTATAAATGAACTCACTTGTGATAACTTAGTGGAAAATGAAAACCAAAACTTAAAAGAACAAAATCACACAGAGATGTCTCTTAAATCTCCCAATGATGCTCTCGGTGGTAGAAATGAAAGTCTTCTGGAAAAGGAAGTTCTAAGTCAGTCTAAGAATCTTAGCCTGGAAGTAATTTCTCCTGTTTCTACAGAAGATCAAATACATTCTTGCACAGTGCTTGAAGGCCTTCTCTTTCCTGCAGAATATTACGTTAGGACAACACGGCGCATGTCAGGTTGCCAGAGGAAAGTAGCACTGGAGGCTGTAATTCAGAGTCTCGTTAGGAAAGAAAAAGAGATTCTTAGAAATTCAGAAAGCAGTAGAACCACCCAGCCTGGCAGGTCAACTGACCAGATGTGACACACACTGGAGGGCTCCTGACCACCTGCGACTTCAGAAAGGCCACCAGGCCCCGCGAAGAAGGGAACAGGTGCCAGTCCTAACTGGAGATGACTTGATCACAAAGCCTGAAGACAAAAGGACTATCCTTCCCAAGACAACAGGCCAGGAGAGAAAGAAGCGCCCTCAGAGGACAGGGTGGAAAGCAAGCCACCCTTGGCACACAGGGTCCTGCCTCTGGCAAAGAGGGCGGGCCAAGTGTGAGTGCCCGGGACCGTTCCTCCAGGCACCTGGTGAAAGGGAGAGGAAGAAGCAAGGCAGCCCCTTCCAGCTGAGATCCAGCAACTGAGTGGCGAAGGGCGTCTCCCTGGCCCTCGTCATGGAAAGCAGGAGCCTACAGAGGCCTCACCTGGCCCACCATGTCTGCAATACAGCAAAGTGCACCCTTAGCTCAGCTTGACTTTCTTTTTAAAAAGAGCTGACGCTACTTGCAAAAGGCCCATCATCGATTAAAACAATACCAAATAGTTGAATACTGAATACCAAAGAGTCGGAGCAAGTCTCGAGACCATCTCTCTCAGTTTTCTGAAAAGGCTGACTGAAACAGAGCTGAGAGCAGGGATACCTCGTCACTAGTCTGCCAAGTGGCGGAGGGGAGGGAAGGAAAGGCTTGTTGTCCTGCGAAAGGGCTGCCAGCTCCACGAGAGAAGGCAGCCTCACCCCCGTCCACCCTCAGAGCCCCGCGAGGGGTCCTGCCCCCTCCCCAGCGAGGACTCCGCGTGGAGAGAAGCCTGAGGGAGAATGAACACTGTGATGCTACTGAAGGGGAAGGAGTGTCTGAATTTGCTAACACAGATTTAGTCAGTACATCCTGGACCATAAGAAGATGACGACGAGCCCGCTCACGGGCCAAGTGACAGACTAGTGAGCGCTGCTGGGACCCAGGCGCGGCTCCTCTGCTCGCCAGGGCTTCCTGCAAGGGCTCCACACGGATGGGGCAGCCAGAGCCCAAGATCGGGCCAGCACTGTTCGTGGGCTCTGGAAAGCAACGCTCGAACAGGTCCGTACGAAAAGATGTCATTTACAGTATTTATATAGAAGATCTCCAAGTAAGGAAAAAAGCACCATTTTTACTTCAAATAAAAAGGCTCACACAGGCTTTGGTCCTGTTTTGAGACGACACCGGCCTGAGCGAGAAGCGGTTTGGCCCTTGGGGAGCAGGGAGTCGGTACGCACGCTGTCACTGGGAGGAAGGGGCATCAGGTGGCAGGGGTGGGCGGGGGGCAGCCGCCCGAGCAGGGCGAAGGGGGAACCTGGTGGGAAGGGCCTTGGGGAGCAGCCCCACAAAACGGGGACAGGATGCCTGCTTCAAGAGCGGGCGTGTGGCACTGTCTGGACAAGCCTCTGGGACAGGCAGGCTGGCCAACAGAAAGAGCAGCATTCAAACCGCGCCGCCACTCTGTGAGCACGCGAGGCCTGTCAACTGCAGAGCAAGGCTTCCACGAGCAGCAAAGACATGCTCTTTCCTCCAAGGACTGTGGGCTGACAAGGACAGAAGAGCTACAGGTACTGCGCCTTTTGCAAGGGGTGGAAAACAGGCCATCTCCTGGATGCTACACTTCCCAGACGAACTTGTACCCCCCAGAAAAGCAAGAGGAGTTTCCTGCCTAGATCCGTAACCTGGCATGGACAACACCACGAAAAGCAAGAGTTGGTCTGGATGGGCTGGATTCTTGAACTACGGCTTAGAAGGGGAAGGGCGCGGACGATCACCATGAACTGGCTCACAAGGAATAGTCATCTTAGGCGAACACATGCTAATACGTTTCACAGAAAGAAGGCTAACAGTCTAGAATCCAGAATGTGACATTTGGGACATCTCTTGCCAAACCTTACTATGAGGGCCTGCACCAGTGAGAGGAGAATCGCAAAGACAGCAGCAGAGCAACAGCAAACAGCACAAAGGGTATCATTCACCAAGAGACCGTCCCTCGTTCCAGAGTCAACCAAACCACTGGGAGACGACAGAACTTCACGTGGACAGAGGACGGTAAGGGCTAAACCCGGAAGAGGGAGAGCTAATCACAAAAGCTGTTTATCCCATTTTCGATGTTGAAATACATCGGCCAACCCACTAGGTCAGATGACTTCTTCTTGAGAAAGGCAGCATCTCTAAACCTGGGATGAAGGACACTTGAACGTAATGCATGAGCAGAAGGACCAGATGCAGACACGTCACTGAAAGAATCATTGGACTGCTGAAGGGTTTCTCAAAACTTCTAAAGAAAGGAGGAAGGATCTGGGTCTGTGGCTGTATGGCTGTATAACTGGCTTCCACCTGGCTCCTCTCAGAGGGGCCTCTGTCGGCACACCCATGCCAGGCTGGGCCTCAAAGCCCAATCAGCGAGGGCTGTAGGCAACTGTCAAAGCGGCAGTGCCATCTCCCCAGAGATCGGGGCCCAAAGGGCAAGACGGTCAGACCGGAGTCGCTGGGACACACTCCGCTGCTCAGCACACACCAGAGCCCTGTGAGCGCCCCGACCAGACCCCTGGCTCTTCCTCTCCTGCCATGCATTCACGAGCAGCAGCGTGGCGGGAGGGAGGCCAGGCAAGGAAGTGGTGATGAGGTACAAAAGGAGGAACTGACATCTTTGGGTTTTCAGAAACAAAAATTCCCATCTAGGAAGTGAGAAAATAAGAAGGGAAAGAATTCATTCTGAACCAGTGGACAGAGAAATATGGCTTACTAACCCCCACATTTTGCATACAATTTTATATGAAAAAGGAAAAAAAAAAACCCACCCCCAACTCATCACAATGCAGTCCAAATGTTTGCAACCAAAGAGTTATGAAAATATTTCAGGTGAAATCACTTAAAAACAAACAACAACCAAAGAATCAGAAAGCTTTTGATCATTCCTTTCTAAACACAATTGGTAGATCTACTCTCAAACACACTTAAGAGTATTCCACACAACATGTTCAGAATTCAGATTTATTGATTTCCACCGTATTGACTTTTAAAAATGGTATGAAGCTGACTGCAAGAAAGGGAACCGGTGATTTTAAGTTAAAATTA EMBV3_22564 GTTTGGTGTAGGTGGTGAGAAAAGATGCAATGTGAAGACTGTGGTAAGGCCCAGTGGAGG Gene BVV0101_025219 + 0 NULL GK000014.2:39725602-39757053 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39597 GTGCAGCTTCCACTTACTGGTTAGAAGAGACCACTGCCCAACCCTCCCCCTTTCCTGTCT Gene GeneID:327703|CACNB1:NM_175819:35_cdna Constitutive 0 NULL GeneID:327703 19 GENE CACNB1 NULL calcium channel, voltage-dependent, beta 1 subunit EMBV3_38760 TTTCCAAACCCGGGCTCTAGGGTGCATGGGCTTCAGTAGTGGCAGTTTCAGGCTCTAGTA Gene BVT0102_139667 + 0 NULL GK000009.2:102842499-102880276 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243100 1 XLOC_149763 NonCoding TCONS_00243100 XLOC_149763 NonCoding NonCoding - 9:102867576-102868888 - TSS182778 1312 2 TCONS_00243100_1 88 0.96875 1 0 0 0 0 0 0 0 0 0 0 5.33127820820431e-05 0 0 0 0 0 0.000664315319084304 0.000366970645547976 0.0011665745705804 0 0 0 3.95919499820381e-05 3.49621842223261e-05 0.000178891058620922 0 8.95004199955802e-07 0 0.00013909885859891 0 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 4e-115 419 94.80 0.202743902439024 0 noncoding 0 0 0 0 0.367179996342079 0.0462404813758525 0.0194925871341093 0.685038296993695 CAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATGCCATGGACGGAGGAGCCTGGTGAGCTGCAGTCCATGGGGTCTCGAAGAGTCAGACACGACTGAGTGACTTCCCTTTCATTTTTCATTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACATGACTGAAGCGACAGCAGCAGCAGCAGCAGCATCCTTAATCTTTCAGTATATTTCTGTTTTAATCATGCCTCTTCTAGACATCATATTATTGCATATATTTTTTCTATATTCAATCTGTCTTTATCTTTTATATTTGATAAGTTTTGTCTATTTATAATTATTATAGTGACCGTATGTTAGGATTTGGTTTTGTGGTCTTATGCTTTGCTTTTATCGAACTTTTTTTTCTTTTTTGCTTCTTTTTATTCTCTTTTCCTGCTTTCTCTTGGTCATTTTGAGTTTTCTGCCAGTTTAAAAGGTTAAAGACTATATTTTTGTTCTTACTGTGGCTAACCTCAATTTAAAACCTATAATTATGCATATTTACCAGTCGTAGTAAACTTGGCAATATCTTACTGTGTCTTACAATTCAGGACGCTCTGCTCCTGGTTTTGGTCTCCCTCCGCCTTCAGCCCCCATGGTGCTGATATCTTAGTTCTGGACGGCTGCGGACAGTCTGTTCCCCACTTGGCTCCTATTGTAGACCTTTCCTAGGCATTTCATCACCCTCAGCTCCGTGTCTCGTATAGCAGTGCCCTGGATTTGTCTCTTTTCGTGTCTGAATCCTGCCTCCAAGAGCCTTTTTCAGTGGATGGCAACATTTTTGAGGCTTGTATGAGTGAGAATGTTTATATTCTCACATCTGAATGACAATTCAGACTTTAAAAAGCTAACATTCGAAGCCCTTTTCTTTTACTACTTTAAACCTATTAAAGGACGTGTTGCCTGGCGGCACGGTGGACAAGCACCCACCTGCCGATGCAGGGACAAGGGGTTGACCCCTGGTCCGAGAAGATTCCTCATGCATGGAGCAGCTGAGTCCACTCGCCACAGCTGGTGAGCCTGCATACTAGAGCCTGAAACTGCCACTACTGAAGCCCATGCACCCTAGAGCCCGGGTTTGGAAACCAGAGGAGCCACTGCAGGGAGAAGGCTGTGTATACTGCGACTAGAGAGTCGCCCCCTTTCTCTCTGCAGCTAGAGAAATCTGGAGCATGGCAGCGAAGACCCAGCACAGCTGAAAATAAATAAAAT TCONS_00238218 TCONS_00238219 TCONS_00238220 TCONS_00238221 TCONS_00238222 . 3' 11365 TCONS_00238218 TCONS_00238219 TCONS_00238220 TCONS_00238221 TCONS_00238222 . 3' 12676 EMBV3_09094 TTCCCTGTGCCATACGACCTACCTCCAGAAGTGTACGGAGACAGAGATCGACCATGGATT Gene GeneID:517053|TDP1:XM_002691112:34_cdna Constitutive 0 NULL GeneID:517053 10 GENE TDP1 NULL tyrosyl-DNA phosphodiesterase 1 EMBV3_25153 GTACCCTGGCTATGGCCAGCAGCCAGCTCCTATGGCAACCAGGACCAGAGTGGTGGCTAC Variant GeneID:280796|FUS:NM_173912:206_cdna 374^626 2 EMBV3_10659 GeneID:280796 25 GENE FUS MGC139714 fused in sarcoma EMBV3_16448 TGAACAAACATATGGATACCAAGGCGGGGATGGAGGGGTGGGATGAATTTGGAGATTGGG Gene BVV0102_062669 + 0 NULL GK000019.2:19240418-19356734 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04313 GCCGTGTCTTCTTTCCCATTTAGAGCAATTACCCAGGAGCCCAGAAACTCAGGTTGACAG Gene GeneID:521663|LOC521663:XM_002685926:61_cdna Constitutive 0 NULL GeneID:521663 3 GENE LOC521663 NULL similar to CD1b molecule EMBV3_14151 AGGCATCTGAAGCGCAACACCCAAACTGTATTTCACCACAGCTCCAACAGGCCACCCTAA Gene GeneID:286766|MFAP4:NM_001080217:439_cdna Constitutive 0 NULL GeneID:286766 19 GENE MFAP4 NULL microfibrillar-associated protein 4 EMBV3_29178 GACACGCTCAAGAGTATCAACAATGCCGAGAAGAGAGGCAAACGCCAGGTCCTTATTAGG Gene GeneID:511390|LOC511390:XM_002698414:355_cdna Constitutive 0 NULL GeneID:511390 26 GENE LOC511390 NULL similar to ribosomal protein S15a EMBV3_25708 GGACTCAGAGTGCGAGTCCGGCTCTGAAGGCGAAGGCACAATGCACCGCAGGAAGAAGAG Gene GeneID:508343|JMJD6:NM_001034320:365_cdna Constitutive 0 NULL GeneID:508343 19 GENE JMJD6 MGC128950 PTDSR jumonji domain containing 6 EMBV3_32875 CAAACACCAAGCAGCTCAGAGAAGGGGAGGCAAGAGAGACGTAGCCAAGAAACTGGAGAA Variant GeneID:617519|CCDC12:NM_001076466:164_cdna 152^353 1 EMBV3_00880 GeneID:617519 22 GENE CCDC12 MGC140772 coiled-coil domain containing 12 EMBV3_22150 TTGCAAGCCTGTAAAAGATCACCTTCATGCCTTACCTGGCTAGGACTGGGAATCGCCTGT Gene GeneID:529891|TTC18:XM_002698911:100_cdna Constitutive 0 NULL GeneID:529891 28 GENE TTC18 NULL tetratricopeptide repeat domain 18 EMBV3_06805 GCACTGCTGTTTCAAAACGGATACGGGCACTGCTTCATTTTCTAAAGGACTATGCTGCTG Gene GeneID:504939|GADD45G:NM_001045901:2_cdna Constitutive 0 NULL GeneID:504939 8 GENE GADD45G MGC137546 growth arrest and DNA-damage-inducible, gamma EMBV3_14056 TCTTCGACTCACGCTGGGCAGGATGGGACAGAGACTTGGCCGGAGAACATTTCTTTCTAA Gene BVT0102_134295 + 0 NULL GK000013.2:10536832-10734367 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044385 TCONS_00044395 TCONS_00044387 TCONS_00041859 TCONS_00044371 TCONS_00041858 2 XLOC_026194 XLOC_025553 Coding TCONS_00044387 XLOC_026194 Coding Coding KIF16B 13:10343315-10551575 j TSS32645 2228 1 TCONS_00044387_2 581 18 0.989388213714653 0.000253230216834508 0.0001637877886595 3.60912253620981e-41 0.00345734553541902 0.00032493329306525 3.80846915543292e-05 1.81505111358857e-101 8.7258927861581e-05 4.62142604695229e-13 8.8426132117471e-74 0 2.48204703846422e-70 1.18426505689874e-16 7.01465610414692e-128 8.53811848810448e-15 1.61965720396925e-53 6.53761907489906e-145 4.17340861142741e-125 2.45935338077825e-145 1.34786770690702e-149 8.80496205095804e-46 3.30663350259526e-52 1.20613289376449e-80 5.77890041392812e-71 1.61489632822994e-107 1.588753416374e-61 4.0134719724749e-34 1.15042154102453e-72 2.48211364121305e-28 3.67405889465387e-50 XM_002692044.2 KIF16B PREDICTED: Bos taurus kinesin family member 16B (KIF16B), 0.0 3137 100.00 0.780071813285458 XM_005260750.1 KIF16B PREDICTED: Homo sapiens kinesin family member 16B (KIF16B), 0.0 2379 90.34 0.780071813285458 TCONS_00044387_2 sp|Q96L93|KI16B_HUMAN KI16B_HUMAN Kinesin-like protein KIF16B; 0.0 1137 97.18 0.975903614457831 2 coding 0 0 0 0 0.00160101969014593 0.991469250045711 0.026564948521098 0.6460225943988 CACCTACTTATCTTGTCGTTCGTCTTCCCTTTGAGAGACTTCTTTCACTCTGGGTTAGAAAGAAATGTTCTCCGGCCAAGTCTCTGTCCCATCCTGCCCAGCGTGAGTCGAAGACTTACAGCCTCACATTCAAAAGTTCCAGGAGTGCTAGGGAAAAGGACTTGGAAGCCAAATTCATTATTCAAATGGAGAAAAGCAAAACGACCATCACAAACTTAAAGATACCAGAAGGAGGGACTGGGGACTCAGGAAGAGAACGGACCAAGACCTTCACCTACGACTTTTCTTTTTATTCTGCTGATACAGAAAGTCCAGATTATGTTTCTCAAGAAATGGTTTTCAAAACCCTTGGCACAGATGTCGTGAAGTCTGCGTTCGAAGGTTATAATGCTTGTGTCTTTGCGTACGGGCAGACCGGATCAGGAAAGTCATACACTATGATGGGAGACTCTGGCGATTCCGGCTTAATACCCCGGATCTGCGAAGGGCTCTTCAGTCAGATAAACGAAACCACCAGATGGGATGAGGCGTCTTTTCGAACTGAAGTCAGCTACTTAGAAATTTATAATGAACGTGTGAGAGATCTTCTTAGGCGGAAGTCATCCAAAACCTTCAATCTAAGAGTCCGTGAGCATCCAAAAGAGGGGCCTTATGTGGAAGATTTATCCAAACACTTAGTCCAGAATTATGGTGATGTCGAAGAGCTTATGGACGCAGGAAACATCAACCGGACCACCGCCGCCACCGGGATGAACGACGTCAGCAGCCGGTCTCACGCCATCTTCACCATCAAGTTCACGCAGGCCAAATTTGATTCTGAAATGCCGTCTGAAACCGTGAGTAAGATCCACTTGGTCGACCTTGCGGGAAGTGAGCGGGCGGACGCCACTGGTGCCACCGGGGTCCGGCTGAAGGAAGGGGGCAACATCAACAAGTCCCTTGTGACGCTGGGAAACGTCATTTCTGCCTTAGCTGATTTATCTCAGGATGCATCAAACCCTCTAGTAAAGAAGAAGCAAGTTTTTGTGCCTTACAGGGATTCTGTTTTGACTTGGTTGTTGAAAGACAGCCTCGGCGGAAACTCTAAAACTATCATGATAGCCACCATTTCACCTGCTGATGTCAATTACGGAGAAACCCTAAGTACTCTTCGCTATGCAAATAGAGCCAAAAACATCATCAACAAGCCTACCATTAATGAGGATGCCAACGTCAAACTCATTCGTGAACTGCGAGCCGAAATAGCCAGGCTGAAGACGCTGCTTGCCCAGGGGAATCAGATTGCCCTCCTGGACTCCCCCACAGCCTTAAGTATGGAGGAGAAACTTCAGCAGAATGAAGCCAGAGTTCAAGAATTGACCAAGGAATGGACAAATAAGTGGAACGAAACCCAAAATATTTTGAAAGAACAGACTCTGGCCCTAAGGAAGGAAGGGATTGGGGTTGTTTTGGACTCCGAGCTGCCCCATCTGATCGGCATCTATGATGACCTTCTGAGCACTGGCATGATCCTGTATCACTTGAAGGAAGGTCAGACACATGTTGGCAGAGAAGATGCTTCGACAGAACAAGATATCGTTCTTCACGGCCTCGACTTGGAGAGTGAGCACTGCATCTTTGAGAATGTTGGGGGGACGGTGACTCTGATCCCCCTGAGTGGGTCCCAGTGCTCTGTGAACGGCGTTCAGATCACGGAGGCCACACACCTCAATCAAGGTGCCATGATCCTCTTGGGAAGAACCAACATGTTTCGTTTTAACCACCCAAAGGAGGCCGCCAAGCTCAGGGAGAAGAGGAAGAGCGGCCTTCTGTCCTCTCTCAGCTTGTCCATGAGTGACCTGTCCAAGTCCCGCGAGAACCTCTCCGCCGTCATGCTGTACAACCCAGGCTCCCGACACAGTGCAGCCCATTGCCAGGTGCTGTCACCTTGACGACTGCACATCAGAAGATACCAGCGCTCCTTTATCCCAGTTATGTTGGGTCCTGCCTCTGTCATCTCTTGTATCCATGATGACACTGGCCTCCTGATCTATTTCTTGGCTTCTCCTCTCACCTGTTGTCTGTGGGCTCTCCAACAACCCTGTTCCAAAATACTTTTCTGCCACCGTCTTTAGGGTCAAGTTCAGAGTGCTCAATATAACTTCTAAGGCCCCACACCCTGTAGCTTCTGTAGTCCCATTGAACTTTGGATCTTGCCACCCTCTACATGCTCCCCGCACCCCTCCCCC EMBV3_10034 AGGCACCAAGTAAATGCAAGCACGATCCCAGCAGAACAGCCCTCACGACACAACGGAAAA Gene BVT0102_002361 + 0 NULL GK000013.2:42960769-42963396 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41289 AAGATTTCCTGGACAGAAGCCTGCTCATTGGCTAGCAGATGGCTCCCAAAACAGACTCTG Gene GeneID:535148|C11H9ORF78:NM_001076048:163_cdna Constitutive 0 NULL GeneID:535148 11 GENE C11H9ORF78 MGC139215 chromosome 9 open reading frame 78 ortholog EMBV3_25698 TTTGGAAGAGGCGAGATAATGATGAAACCAACCAGCAGGGGGCATGAAGGAGGCGTTTAG Gene GeneID:532985|USP39:NM_001101145:107_cdna Constitutive 0 NULL GeneID:532985 11 GENE USP39 NULL ubiquitin specific peptidase 39 EMBV3_21635 TTCTGTTTTGTGTGTGAGTGTCCACCTGTGTCCCCCTTCCCCTTCAGTGTTAAATGGGAG Gene GeneID:787278|MAP2K7:XM_002688836:144_cdna Constitutive 0 NULL GeneID:787278 7 GENE MAP2K7 NULL mitogen-activated protein kinase kinase 7 EMBV3_09678 GGAGGCAAGTTCAATGTTCATGAAGAATTGGGAGAATGGGGCAGTAAGCCATGATATCAC Gene BVT0101_005539 - 1 EMBV3_19139 GK000016.2:75000063-75069689 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074281 1 XLOC_046037 NonCoding TCONS_00074281 XLOC_046037 NonCoding NonCoding - 16:75001460-75002992 - TSS56125 1532 2 TCONS_00074281_7 98 1 0 0 0 0 3.79433141703437e-05 6.44539810834349e-05 5.60374365108146e-05 1.90330172478997e-06 0 0 1.07428180321208e-05 5.22985916779645e-05 0.000116700015760026 0 0 1.60124115220198e-05 0.000103439791129682 0.000552686225224133 8.18895475034437e-05 0 0 0 0.0012811800215634 5.38946481159251e-05 6.56577331363727e-05 0 0 0 6.26969827877433e-06 1.90128207112354e-05 0.000313955304287105 XM_005217393.1 SERTAD4 PREDICTED: Bos taurus SERTA domain containing 4 (SERTAD4), 0.0 2764 100.00 0.99934725848564 0 noncoding 0 0 0 0 0.0402748677603516 0.703898966144431 0.00744344424983902 0.90561822025234 AGTGTGTTTATATTTTAATGACTTATCCTTGTATAGTTTTTTGGTTAAGGATTTCAGTGTTTCTATTTGTTAGTATTGTTTCCAGCACATGAAATTCTACTCTTATGCATCTGAGCTTGAATCATGGCATAATAGTTTTTATCTTGGCTATTTGTTTCTTTCTTTTATACTATCTAGTTTCAGTAAGTTTTTTTTTTTTTTTGAATGGGAAACTTTTACACACAAAATCCTCAACTGGAGAGGCTGAGTTCCACAAGTACTTTATATTAAAGTCTGAATAAAAAATAAATGAGTTGGAATTATTTGGGAGCGGGGAGGAAATTTTGCAATTGAGTCTTCCTAGTCGATTTAGAACTTACACTGGGATGTTAGCAAATTAAGGAGGCAAGTTCAATGTTCATGAAGAATTGGGAGAATGGGGCAGTAAGCCATGATATCACATGATCGTTTTATTTGTATTTTGTGTACACATCCGAACTGTCATTTTTTTCTCAGTGAGATTTACATTGTAATTCTGCTACTGAGTTCAGAAGTTGAAATTCACAAATGTATGAGCTGTGAATACTAGATAAAGTCACAGAGATGCACATTTATGGTAGTTTTTTTTTTTTTTTAACATCAGAGGTGAGTGGATGCAAAAGAAAGGTGTTAAAGTGTGTTTTGTCTATAAGAGGGTTTAAAAAATAAAAACTAGAAAGCCCTTAATCTTTTCTCCTCAGGCTCCTGCATGTCTGCTTTGTCAGCCAAGGTAGCAGAATGACAGCTCAAGCATTCCCCAAAGGCCCAGGGCTAAAGTGTCAAGTTTTGCCAGCAAGTGTTCACAGTCAAGTTACCAGGCGGTTTACACACTATGGTTCTTCCAGATGATTTGGGCTTCTTCTCTGCTTGGAGCCATTATGATGCTAATAGGAGTGGCGGGCACAGAGGACAGGATAGCTGCAGATTCAGTGATGCCTGCCATCCAACAGGGGATCTCAGTCATTCTTTGCCCACCCCATCCCTCTCATCCATCATTGGAAAACATTTTATTAAGAGCATTAGAGCAGTTCAGAGGTCTAACTCCAATACTGAAAAGCACAGAAATAAAAGAGCTGATATTTTCAATACATCTTGAGGTTGTCAGCCTTAGATATCCTGCCCAGGTGGAATCAAGCCCTTGATCTGCCATTGTCCCTAACAAGCTATCAACAGCTTGGGTTGGTGGTGGCAGGGTCTGGGTGAGTGGAATAAAAATCTTTCAACCCTTCCAAATAGGCAGATGTCGCTTTTCTACCAGTCTCTGCAGTACACCTGTCTGCCCTGGGAAATACATTTTTCAGCTGCTGCTTTGAAAGGCCAAAAGATTTAGGTCTGATCCTGCGGCTGGGAATGGGGTGCCAAACCAGAGGGGGATGAGGTTGGGGGATCCGGGGGTCCAAGCCCAGCCCGGGGTGCCAGGTCTCCCCATCCCACTCCCAAGACTGGGGTCTGAGGTTTGGAGACCCACCCCCTGCAGGCGGGCAGCAGCCGATGTCCGAGTCCCCACAGTGACA TCONS_00068292 . 5' 719 TCONS_00068292 . 5' 719 EMBV3_35682 GAAGAACACTGAGTCTGTCAAGGGCCTGAGGAAATATGAGCGGCGGGTCAAGGAGTTAAC Gene GeneID:281338|MYH3:NM_001101835:412_cdna Constitutive 0 NULL GeneID:281338 19 GENE MYH3 MGC155213 myosin, heavy chain 3, skeletal muscle, embryonic EMBV3_27988 CCTGTTCTTCATTCTCTTCTCCATAGGTTTCTGCATCACTGTCATCTTCAATCGGTTCGC Gene BVV0102_456836 - 1 EMBV3_20738 GK000030.2:15472117-15527586 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013343 1 XLOC_008097 Coding TCONS_00013343 XLOC_008097 Coding Coding AVEN 10:28592758-28788422 = TSS9931 1713 1 TCONS_00013343_3 441 7 0.991280926899823 0.00130583157049963 0.00104109865235172 0.000192400350964477 0.000494791736133198 0.0005947196177231 0.000168247672615962 0.000564227280609361 0.000486079220882248 0.000552575117686642 2.48542205030386e-05 9.82935635984668e-05 5.0825970585992e-06 0.000209465170031515 1.51652707791439e-05 5.27485056435393e-05 0.000483391210639275 4.95986534268646e-05 9.75593896674749e-05 0.0015612742438874 0.00152793998879696 0.000125311611171384 0.000861141332565002 0.000183358659409504 0.00013376749091819 0.000355703261619134 0.00138088922936325 0.00079690704148727 4.80426091290962e-05 2.87961901586887e-05 9.70242175184954e-05 XM_002690781.3 AVEN PREDICTED: Bos taurus apoptosis, caspase activation inhibitor (AVEN), transcript variant 2, mRNA. 0.0 2913 100.00 0.942206654991243 NM_020371.2 AVEN Homo sapiens apoptosis, caspase activation inhibitor (AVEN), mRNA. 0.0 1323 78.94 0.880326911850555 TCONS_00013343_3 sp|Q9NQS1|AVEN_HUMAN AVEN_HUMAN Cell death regulator Aven; 7e-132 389 77.54 0.643990929705215 0 coding 0 0 0 0 -0.16267428052424 0.32903443323232 -0.0147381865217242 0.769229616844821 ATGCACTCACTCCCACTGGTCAGGCCTTTCCTACAAACCCTCGGCCCTCCCGGAGCCCCGGCTCCGGCCCCACCTGCCAAGCCTCAGGGCAGCCCCGCCCCCGCCGCGGCCGGCTTCCATCCCCGGCCCCGCACCCCGCGCTCGCTGACACCTAGGCCCGGCGCTCGCGGCTCCTCCGTGGGGCCCGTTTCCGGTGGGGCAAGGGCGTCTCTGCGGGCGGCCAGCTCCCGCGCGCTCAGCATCGCCGGCGGCAGCCAGATGCAGGCGGAGCGAGGAGCTCGGGGCGGCCGGGGACGCCGACCCGGCCGCGGCCGGCCGGGCGGCGATCGCGACCGCGAGCGGGCGGGCGCCGGGACCGCCGTAGCGAGAGGTGGCGGTGGAGATGGAGGCGGCCGCCGAGGCCGCGGCCGGGGATTCCGGGGCGGCCGCGGTGGCCGAGGAGGAGGCGCCCCGCGAGGCGGCCGTCGGGAGCCGGGAGGCTGGGGCGCCAGGACCAGCGAACCGATTGAAGATGACAGTGATGCAGAAACCTATGGAGAAGAGAATGAAGAACAGGGAAATTATTCTAAAAGGAAGATAGTCTCTAACTGGGATCGATATCAAGATACTGAAAAAGAAGTTGATAATGAAAGTGGAGAATCACAGAGGGGGACAGATTTCAGTGTTCTTCTCAGCTCTGCAGGGGACTCCTTCTCACAGTTCCGGTTTGCCGAGGAGAAAGAGTGGGATGGTGAAGCTTCATGCCCCAAGCAGAATTCAGCATTTTATGTGGACTGTGAGTCATTGGTTCGAGCCCTTCAAGAATTGCCTCTCTCACTCCGACTCAATGTTGCTGCTGAATTGGTTCAGACTGCCCTTCCTTTAGAGCTCCCTCAGGTGAAACCGAAGAGAAATAACGATGGCAAGGGACTAGGGATGCAGCTAAAGGGGCCCTCGGGGCCTGGAGGAAAGGGGTCCCTCTCTGAGATGAAATCCACCACCACTGGCTTCCCCGTGTACCCGGGTAAAGACGGCCCAGGATCGGGTCCTTCCAAGGGTTGTCAGAATCCCACTTCCCTGCTGCAGTTGGCAGCAGATCATTTGGAAGAAGAGCTAGATCTGCTGCTTAATTTAGACGCGCCTGTGAAAGAGGGAGGTGACATCTTATCAGACCAGACAGCTCAGGACCTGGAATCTGAGAAAAGGGGGGACCTGGTCCAAGCAGCAGCAGAACCTGCAAACCCATTTGTGTTGGAAGAAAAGAACGTGACCTCGGGGCAACCAAGTATATCCAGAAATGTTACCGAGGAAGAGCTTGAAGACTGGTTGGACAGCATGATTTCCTAATGACAAGGAAAGAAAGGGAAAAAGAGGGAAAAGAAAATGAAAACTGCCTGAAGCCAATTTTGGTTGCCTTGTAAGGGTGCGCAGGCCCAAGGCTGTCCTAGAACAGCTGGTTTACAAGCATGACCCCAAGCCCATGTGTCCATCACGCTTAGCACAGTAGATGCCTTCCTCCATGTTCAACAACATCTGAAGTAGACGTTTAAGAGGCTCGCTACATTTGTTCTCTGGCTTTAGTAACTGAATAGATGTCTTAAGGGCAAGAGATGTTTCGGCCCTTGTTTCCAGTGTCTTCCTCTCTGTGTTTACAGCATAGCAGGTGCTGCTGATGAAGAGAAGAGAGCTAAGCAACCAGGCATGCATTTGGCCAAAATAAACACTGGTCTGTAG EMBV3_38887 AGGGGCTTTGCCTCTGGCCTCTGAACTAAAGTGCTGATTGAGTGTGGGGTTGATTTTGCT Gene GeneID:787021|LOC787021:XR_084026:502_cdna Constitutive 0 NULL GeneID:787021 22 PSEUDO LOC787021 NULL similar to Uncharacterized protein C3orf32 EMBV3_25997 CAAAGAGTAACTAAAAAGGAACACAGATGCATACATTAATAAACTGGGCAGACACTGACG Gene BVV0101_068665 + 0 NULL GK000028.2:3520214-3656712 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212538 TCONS_00161155 2 XLOC_130213 XLOC_098047 Coding TCONS_00212538 XLOC_130213 Coding Coding KIF3A 7:22892052-22987657 j TSS159465 3767 1 TCONS_00212538_5 654 0.0286700292009557 18 0.960786159574913 0.00067270568843705 0.000443825178469493 0.000569400273939584 0.00050101989589212 0.000477373571331804 0.000399424058723324 0.00109515156741272 0.000567262311995723 0.00280700106386979 7.81094469741296e-05 7.15701703805803e-05 0.000176539324921071 0.000107482539585782 0.000401779550792326 0.000344352106757158 0.00038541695162129 0.00213811480349698 0.00046533362896407 0.000366405481436852 0.000297468806009701 0.000216190610820375 3.17698628113834e-05 0.00021644460076126 0.000475737882834469 0.000786500170632704 0.000472534359428691 0.000526769916538489 0.00017969550051177 0.000117377875126964 6.16166076895043e-05 XM_005209054.1 KIF3A PREDICTED: Bos taurus kinesin family member 3A (KIF3A), transcript 0.0 3690 100.00 0.542872312184762 NM_007054.5 KIF3A Homo sapiens kinesin family member 3A (KIF3A), mRNA. 0.0 3231 95.01 0.542872312184762 TCONS_00212538_5 sp|Q9Y496|KIF3A_HUMAN KIF3A_HUMAN Kinesin-like protein KIF3A; 0.0 1335 98.93 0.998470948012232 1 coding 1 1 1 1 0.235500151690641 0.499606287914159 -0.026554000611241 0.700319404206621 CTCCTGGCCCTGGGACTGTCCTGGCGCGCTGGGGCCCACTCCTCCCGGCCCTGGGACGCGGCGGGAGGGAGAACGCGCAGATTTTGGCTGTACCATGTGCCATGTGGGATCTTAGTTCCCTGACCAGGGATGGAACCTGCATCCCCTGCATTGGAGAGCAGAGTCCTAACCACTGGATGACTGGGAAAATATCTGAAGATCAATAAATCAGAGAAGCCGGAAAGCTGCGATAATGTGAAGGTGGTTGTTAGGTGCCGGCCCCTCAATGAGAGAGAGAAATCAATGTGCTACAAACAGGCTGTCAGTGTGGATGAGATGAGGGGAACTATCACTGTACATAAGACTGATTCTTCCAATGAACCTCCAAAGACATTTACTTTTGATACTGTTTTTGGACCAGAGAGTAAACAACTAGATGTTTATAACTTAACTGCCAGACCTATTATTGATTCTGTTCTCGAAGGCTACAATGGGACTATTTTTGCATATGGACAAACTGGAACTGGGAAAACGTTTACCATGGAAGGTGTTCGAGCTGTTCCTGAACTTAGAGGAATCATTCCAAATTCCTTTGCTCACATATTTGGTCATATTGCAAAAGCAGAGGGTGATACGAGATTTTTGGTTCGAGTGTCTTATTTGGAAATATATAATGAAGAAGTTCGTGACCTTTTGGGCAAGGATCAGACACAGAGGTTAGAGGTGAAAGAAAGACCCGATGTGGGAGTTTATATCAAGGATTTATCAGCTTATGTGGTCAATAATGCTGATGATATGGATAGAATTATGACACTGGGCCACAAGAATCGTTCTGTTGGTGCAACTAATATGAATGAACATAGTTCCCGTTCCCATGCCATCTTTACAATCACGATAGAATGCAGTGAGAAAGGTGTTGATGGTAACATGCATGTCAGGATGGGGAAGCTTCATCTTGTAGATCTTGCTGGTTCAGAAAGACAAGCAAAAACTGGAGCTACTGGACAGCGCCTAAAAGAAGCTACAAAAATCAATCTTTCGCTTTCCACCCTTGGTAATGTTATTTCTGCCTTGGTTGATGGAAAAAGCACTCATGTGCCTTATCGTAACTCTAAATTGACTCGTCTTCTTCAGGATTCCTTAGGAGGAAATTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGATTACAATTATGATGAAACCATCAGTACATTGCGGTATGCTAATCGTGCTAAGAATATTAAAAATAAAGCTAGAATTAATGAAGATCCAAAGGATGCTTTGCTTCGTCAGTTTCAGAAGGAAATAGAAGAACTGAAAAAAAAGCTTGAAGAAGGGGAAGAAATATCAGGCTCTGATATCAGCGGTTCAGAGGAAGAGGATGATGAAGAGGGTGAGGTTGGAGAAGATGGAGAGAAAAGGAAAAAAAGAAGGAGTAAAAAGAAAGTTTCCCCAGATAAGATGGTTGAAATGCAAGCAAAAATTGATGAAGAGAGAAAAGCACTTGAAACAAAGCTTGACATGGAAGAAGAAGAAAGAAACAAGGCTAGAGCTGAGTTGGAGAAACGGGAAAAAGATCTTCTTAAGGCCCAACAGGAGCATCAGTCTTTGCTAGAGAAATTATCTGCACTGGAGAAGAAGGTAATTGTTGGTGGTGTTGATTTGTTGGCAAAAGCTGAGGAACAAGAGAAACTTCTTGAAGAATCCAACATGGAACTGGAAGAAAGGAGAAGAAGAGCAGAGCAACTTCGTAGAGAACTTGAGGAAAAAGAGCAAGAACGCTTGGATATTGAAGAAAAGTATACCAGTTTGCAAGAAGAAGCACAAGGAAAGACCAAGAAATTAAAGAAAGTTTGGACTATGCTGATGGCTGCAAAGTCAGAGATGGCTGATCTCCAACAAGAACATCAGAGGGAAATTGAAGGCCTCTTGGAGAACATTCGACAACTTAGCCGGGAACTGAGACTTCAGATGCTTATTATTGATAACTTTATACCTCAGGATTATCAAGAAATGATTGAAAACTATGTCCATTGGAATGAAGACATAGGAGAATGGCAGCTAAAATGTGTTGCCTACACAGGAAATAACATGAGAAAGCAGACTCCAGTTCCAGATAAAAAGGAGAAAGATCCCTTTGAAGTGGACCTTTCTCATGTGTATCTCGCCTATACTGAGGAAAGCCTTCGGCAGTCCTTGATGAAATTAGAGAGGCCACGGACTTCAAAGGGAAAAGCAAGGCCAAAGACTGGGAGAAGGTAAGAAGAATTGGATTTAACTAACAGCATTCTCTTTGTGATATGCAAGATAGTTAGACATTTATAACTTTGTGGGGCATTGTTTAGATACTGTGAAGACTTGAGGTGAACTTATGTCTTGTAAAAGCTTTGTGTAACCAGAATATCTTGGGAGTTATAGATGCACATTTAAGTCTATTAGTAATTAGAGAAATCTTAATTTTACCAGTAGAAAAAAAAATGACTATGTCTTTTTTTTTTTTTAAAGTCCACAGGTCTAGCCTTTAACCATCCATTTAATAGAAGAGGGATAACTTTTGCATTAAGCTTTAAAACATTAAGGAAAATTTAAGTCAGCATCTTAGATATTTTTCTTTTCCATGTCACTGCAGTAACAAAAAGAAAGCTATAAAAAGTCAAAACTTTGATAAATTTTAAAAATAGGCTGCTTTAGCATTATATTAGAACTGATATCAAGATTAGATATTGGAGCCAGGCCTGAGTCCCCATGTGAAAGCATGGGAACCTAGCGTTAAAGCTGTTCACTTAGCTCCAATCATAGCAGTCCTGTGGTTCCTTCACATTTACTTTGTGTCATTGTCCACAAATGAAATATTTGTAACTTCAGTGTTAGTTTCATGAAAAGATAGATAAATTTGCTCATTATTTGAAATAAGAAACATTTAAAATGAGTGTCACATATAAGTAGGTTATTGAATGTGAATGGCGATTTTTTCTCTTTAATTTAAAAAAGTAATATTTATTAAGAGGAGCCTTGGTAGAATGTTGTTTGTGGTATGTTCTTTAGTAAACCTTGCAAATATATGTAGTAATAACTGAGATATTAAAATATGATAGTATTCCCCATTTCTGTTTAGATTCTTGTGAGGTGTAGGGTAATTAAGGTGGGAGGTTTACCTCCATGTGTTCGTCCCACAAGTAGAATCAGTTTCACATGCTGTGTCATCTATTTTTTGAGAAAAAAAGGACCTTTTTTTGCTGCACGAAATTTAAGGTTACTTTGGGGGAGAGGGTGGTGCTACTTCAACTAACATTTTTTTTTAAATTACGATTGTAGCTTTAGTTTGTTGTGTTTCTTTTTCATCTTTTAATAACATTTTTCCCTTAACTGTTATCATAAGGGAAGTCCCTCCCTTTCCTGCAGGGCTGTAAATTAAAGGATGGGTAGAGTTTACATTTAAGTACGTCAGTGTCTGCCCAGTTTATTAATGTATGCATCTGTGTTCCTTTTTAGTTACTCTTTGATATAAATGCTAGACTAAAACATAGATCTTCCTAGTGCCTTTGAACTTCTACTGTAGTCTAATTGAAATCATCAGTAACTTCAATAGCATTACTACAATACTGTATACTGGCCAGAATTACAAATTGTATGATGAGTTTGTTGCATTAATTTCAAAAGCCACACTTTAACTGTATTTTATGTATAAATTGTATTTGTTCAAGTTGTATATATTAATATTGTATGTATACATACAGCACGCTTAAGTAAGAAATAAAAATCTTTAGCCTAATGCCTGTAAT EMBV3_43417 AGGCACTGGCGGCCGCTGGCTACGATGTGGAGAAGACCAAGAAAGCCACGGGCGCGGCCA Variant GeneID:513971|HIST1H1C:NM_001083425:80_cdna 265^450 1 EMBV3_30635 GeneID:513971 23 GENE HIST1H1C NULL histone cluster 1, H1c EMBV3_38713 GGGTTACACTTAGAACCCTCTAGAAATAAGCGGCTAACTGGGGTCACACATCTGCTCATT Gene BVV0102_244400 - 1 EMBV3_20718 GK000003.2:16837423-16869283 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36954 CAGCATCTGTCAAATACCTGGCCCCATTTGTGTTGGTTTTCCTCTTAGTACGCCCAGGAG Gene GeneID:618503|C20orf44:NM_001076508:1348_cdna Constitutive 1 NULL GeneID:618503 13 GENE C20orf44 NULL basic FGF-repressed Zic binding protein EMBV3_09862 AGTGACTTAGCCTGGTGAGCCTTTACTTTCGCCACAGGAGGTGGCATTCAGGTTTCAGAA Gene GeneID:614904|MAP6D1:NM_001076354:61_cdna Constitutive 0 NULL GeneID:614904 1 GENE MAP6D1 MGC142743 MAP6 domain containing 1 EMBV3_36695 GGGATTGTACTGTCCTGTGGGTTAAGTTACAACCTCGTGGGCTTGGCTAGGTGTGGAAGA Gene GeneID:338050|SERPINA5:NM_176646:148_cdna Constitutive 0 NULL GeneID:338050 21 GENE SERPINA5 MGC133897 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 EMBV3_10120 CCCAGCTAAACTGGTTGAAACAGAGGAAATGGGAGTAGAGTGGAGCTCATGGGTTTGCAT Gene GeneID:618755|LOC618755:NM_001078091:137_cdna Constitutive 0 NULL GeneID:618755 14 GENE LOC618755 NULL hypothetical protein LOC618755 EMBV3_30786 TCACATCTGAGCTAGGCCTTTATCTGACCTGGCTGCCCTTCTTCTGGGAGACTTGAGACT Gene BVV0102_216710 + 0 NULL GK000019.2:38585654-38594901 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093667 1 XLOC_057216 Coding TCONS_00093667 XLOC_057216 NonCoding Coding - 19:38591958-38594466 - TSS70209 2508 5 TCONS_00093667_1 50 0.0733652312599681 1 0 0.00022971767239908 0.000598917577170969 0.00108101107522628 0.000112385451038399 1.77171623973315e-05 0.000199676388549778 0.000148309740249441 0.000497609746984189 0.000110109579003743 1.6747022529033e-06 0.0002299595910552 4.27694675480206e-06 2.28810298034795e-05 0.000448267770217579 1.36935138664838e-05 0 0 0 0.000168694157298029 0.000520949033210435 0.000390965320007578 0 0 0 0.000382196009637464 4.54740046374046e-05 2.56979879867845e-05 3.44683146236995e-05 0 7.19168048653358e-06 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 8e-39 167 78.54 0.0753588516746412 0 noncoding 0 0 0 0 -0.513012477005663 0.0431378831401641 0.0206593827936715 0.654513192126157 GAGACTGGGAACCTAAGAACCCACGTTGCCTTTTCTCTCAGTCCTTTCTGCTGGGGTTGGGAGTTATTTAGTTGCTCAGTCATGTCTGACTTTGCAACCCCATAGATTGTAGCCCACCAGCCTCAGTCCATAGGATTTCCCAGACAAGAATGCTGCCATTTCCTCCTCCACGGGATCTTCCAGACTCAGGGATTGAACCCATGTCTTCTGCACTGCAAGAGGATTCTATACTGCTGAGCCACCAGGGAAGCCAGCAGGAAATCTGGAAAGTTTTCATCTTTCTGCTACATAGGAGAAGGTAGCAAGGTTCAGGGATGAATTGGGACGCTGAGGCCTAAACAATTACTGCACTTGATAGTACAATTTGAGGCACTTTTGCTCCATCCCTTTCCTTCTGTATTTATAATTGACTATTGGTGACTTCAGCTATTAACTAGGGAGACTGCATTTCCCCAACTCCCAGAATGATTTCTACTCTTTTATCAATCTGATTTGGAATTTACTTCCTCTTTTAGACCTCAAATTGTTTCCTTGATTAGAAGAGCAAGGGATGAGGTGAGGAGGTTCTCCCTGGGAGGGAAATGTAGAAAGTGGAGTCTCAAGTCTCCCAGAAGAAGGGCAGCCAGGTCAGATAAAGGCCTAGCTCAGATGTGAGGTTTGAAGGGAAACCCTGGTTCCCTTCTTCCCTCTTTTCCAAAGGCCTCTGTGGAGGACATCTTAAAGTGAGAGGAAACAGTTGGGAGCATCTACCAATCCAAAAAGGGCAACAGAAATATGCTTGCTCTCACCTCAATACTCCTTTTCTCGTCAATCCTTCTGCAGCCACTGCCTGCCCCCTCCAACTTCCACCTCCCACCTCAACCCTCCTTTCCTTTGTCCATCCTCATCCCTTGGCACTGAACAGTCTCTCACCCTCCCCCACTGCATCTCTCTTAAAAGAGTTGCCAGCTGGTCCCTCCCCACAACTTGTCCTGCTCCTCTGAAGCAGAGGGAGGGAAGCAGGGGTCCTGTGAAATGCTTTAAGCTTTTTCATAGTTGGGGGCTAAGTAAGGCTCACAGTTATTAAGAAAAGAGAAAGGCAGTGCAAGTCTGGTGATAGAGACGGAAAGTAGAAGAGAGCAGGCAAAGCAAGGGAACTGGGAAACAGAAAGAGGGAGCAGTGACACAGAGACTGAGAGAGACAACTTTGGGCCTCCTGCAGAGAGATGAGGACTCGCCCTGCCCTGCCCTTTCTGGGGTGGGGAAACCTGAGAAGTTTTGAGGGTCCTCTCTGGGCCTGTCCCACCTGCTTTCCCTTCCTCCCCTTAGCTCAGTTGTTTACAGAGATCCTCCTCTGAACTCTTGCCCTCCTGGACTTGCCCTAGCCCCGGCCCCAGGGCTCAGCCAGGCAGACACCCTGACAGATTACAAATGAGCGTGGGTGTTAGATTGCGCCAAGCTCTTGTCCCCAGAGTCTGGAGGAGGGGAATCAATGGGCTCTACCTAAGAGCTTCCCTCTAGTTCCATCTCAGTCTGAACGGACTGAAGGAGGCACTTCCTGTTCCCCTCCCCTCCCCCAACCATAACCCAACAGACACACCCAGCAGAAAGGGGTGAGACTCCCCTCCTGAGCCTCAAGACCCGCCACTCGCCACTCAGAAGCTCCCATTCTCTAAGCAAAGTCCTTTGATCTATTCTACAAAATTCCTTGGAAACTTGAGTAATCTTTAAGATATAACTGCTATTGAATTTACGGATTTGAGGCTTGGGATTTTGGGGGAGAGGGGTGTGGGGCAGGAAGGAACCAGAAGAATGCACTACACTAGTTTAAAGCATTTCAGGAAAAGAATAAAAATTCCCTCGTCTTCACCTGTAAGTAAACATCACCTAGCTCTGTGCTCATTGTGGCTCTCTGGAGAGACACAGGGAGTTATTTGAGTCTGAGTGAGTGAGCCAACTACAGCTATGGATGGCTAGAGAGAGGATAAATACATCCGGAGAGATGAGTTGATGGATAGGTAGGGAAGGAATATAAATATGGAGAGAGATGGAGGAACAGAGAGATGGATTGAGACAGAGAGAATATAAAAAGAAGCTGAGGGAGAGAAATGGATGTGTGAATGAGGAGAGAGTGGTTATGTAGAGAGGTGGAGAGGGGAATGGGGCATTTCTCATCCTCTTCTCCGCAGTTCTGTCATCTTGTCTTGCTCCTTGAAATGCCAGTTTTCCACCCCTCACTTAATGAATTCTTTCTCTAGATTCTAGGCCCTGCCTCACACCCTTAGGTGTTTTTGCACCCTCTTCCTTCACAGTCATCCATTTGGCCCAAGACAACATACCTCACTTGGCTGTTCTAGCCCATCACCCCAAATTAGGAGAAAGAAACTCAGAGTGGGAGTTCTGGGCAAAGGAGGCTGGATTCCCCATCTCCTGGTCTACAGACTTGGGGAGGGGGTTGCTCCTTTGTGAGGTGAGGGGGGCGGTGGTGGGAAGAATGAAGGGCAGCTGGGTTGAATTTGTCCAAATCTA TCONS_00093668 s 5' 0 TCONS_00093668 s 5' 0 EMBV3_38902 GTAGACGAGCCACTGAAAGTAAGAGAACACGTATTTTAAAAAGTCAGCCTGTAACTCCTG Gene GeneID:519474|TERF1:NM_001076865:31_cdna UTR3_Alt 5 NULL GeneID:519474 14 GENE TERF1 NULL telomeric repeat binding factor (NIMA-interacting) 1 EMBV3_30318 GCTGCTCTGAAAGACCATCAGGTCTGAACTCATGGAAGTGATAACACTAAACAGTGCAAT Gene GeneID:534842|ROBO2:XM_002684652:9_cdna Constitutive 2 NULL GeneID:534842 1 GENE ROBO2 NULL roundabout, axon guidance receptor, homolog 2 (Drosophila) EMBV3_24624 GTGAAGTTTGACCTGGTGCCCTGGGACAGCACTTTCTACACCGTCCACACCTATGTCTTT Gene GeneID:450212|RXFP4:NM_001007076:55_cdna Constitutive 0 NULL GeneID:450212 3 GENE RXFP4 GPCR142 GPR100 relaxin/insulin-like family peptide receptor 4 EMBV3_35726 TGTGTTAGCAGCTCCTGGGCCAAGTGTGTCACTGATGTTTCGAGTTGTCTCTGCTGCTCA Gene BVV0102_019927 + 0 NULL GK000027.2:41954564-41958077 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156573 TCONS_00156574 TCONS_00156571 TCONS_00156569 TCONS_00156572 TCONS_00156567 TCONS_00156570 TCONS_00156568 1 XLOC_095045 Coding TCONS_00156569 XLOC_095045 Coding Coding UBE2E1 27:41956547-42018580 j TSS116907 2397 2 TCONS_00156569_6 158 6 0.961455377869487 0.00397260440056528 0.00234939334004128 0.00135908441938045 0.00444728457481714 0.00663594651323268 0.00332131325821274 0.0125122147052133 0.0248226982627695 0.0323948101353092 0.00152025082219466 0.000693337099131605 0.000792578148641148 0.00100134918047706 0.0032599787449747 0.00357285322264942 0.0238840804365876 0.0147024938543502 0.00622600241008612 0.0104032148465928 0.00350406634180936 0.000992832296664057 0.00390420077522747 0.00825247566418974 0.00311098935580078 0.00303264125646015 0.00279994917508158 0.00147770311528644 0.0030985614861091 0.00275793402750742 0.00165223700337713 NM_001206216.1 UBE2E1 Bos taurus ubiquitin-conjugating enzyme E2E 1 (UBE2E1), mRNA. 0.0 971 99.63 0.226533166458073 NM_003341.4 UBE2E1 Homo sapiens ubiquitin-conjugating enzyme E2E 1 (UBE2E1), 0.0 774 92.13 0.222361284939508 TCONS_00156569_1 sp|P52482|UB2E1_MOUSE UB2E1_MOUSE Ubiquitin-conjugating enzyme E2 E1; 4e-116 331 100.00 0.993589743589744 1 coding 0 0 1 1 -0.158107749742228 0.372934491693818 -0.0109847793157852 0.829765186643996 NNAACTGAGAAAGAAGCAAACACCCCCAAGAAGAAGGAGAGCAAAGTCAGCATGAGCAAAAACTCCAAACTACTCTCCACCAGCGCCAAGAGGATTCAGAAGGAGCTGGCGGACATCACTCTAGACCCTCCGCCCAACTGCAGCGCTGGCCCCAAAGGCGACAACATCTACGAGTGGAGGTCCACCATCCTTGGGCCCCCGGGCTCCGTGTACGAGGGCGGCGTGTTCTTCCTCGATATCACCTTCACACCGGAGTACCCCTTCAAGCCTCCAAAGGTTACATTTCGGACAAGAATCTATCACTGTAATATTAACAGTCAAGGAGTTATTTGCTTGGACATTTTGAAAGATAATTGGAGCCCAGCACTAACCATTTCTAAAGTCCTTCTTTCTATCTGCTCACTTCTCACAGACTGTAATCCTGCCGACCCCTTGGTGGGAAGTATTGCCACTCAGTATATGACCAACAGAGCAGAGCACGACAGAATGGCCCGACAGTGGACCAAGAGATACGCTACATAAACTGGGTTTTCACAGGTTACACATGGCCATTTATGTAAAGTCCTTCCAAGACTACACACTTTTTTGTTTTGAAAAATTGGAATTTGTTTTCCCTCCTTGAAAGCGAACATTGATATTTAACGGCTTTTAGAGACTGTCATCTCATATATAAAATGGACACGTGGCTATAGGATACCAATACAGAAAATGAGTAGTTATGTATTTTATTTTATATGCCAATCTACTTTATTGTGAAGAGAGAGAGGTTTGAATCAGGACTTTTGAAAACCTGTAGTAAAATACCTTAAGCTGTTAACTGTCAGGCGTGGAGTAGGTTGCTCAGTGGATTGGCTCTATGTTGTGGACTACTCAAGTCTGCATTTGTTACTGTGCTAATAAACAATATTACAACCACCACCAGCACTGCTGCATTCATTACTTTCTTCTGCCTTTTTGGTAGTTTTTCTTCTTGCTAGATCTTTTACTATTAAAACAATCTAGAGTTAATGCAGACTGAACACGTTGGTTTCATTTACCCAGCACCAACTGGGCTTGGTATGTTACTCTTAATTTATCCAACAGCCTTGCAGGATAACTACTGAGGTGCCTTAGAAAAGGTTAGATAATCTAAGTCATTTTCTTCCAAAGATAAGAGTTCTGCTACATCTTTTTAAAAGCATTTTCCAGTTTGTAGATGCAGTGGTAGAATTAGGTTGGTGCAAAAGTAACTGTGGTTTTGCAGTGTTGCGCTTTGCCATTTGATGTTGGAACACATTCTTAAATGTGGTTATGTGATACATCATTTTAATGTGCATGTCTCAATTTACTTTTTTTTTTTTTTGCGAATGACTTATTACTTGCTAACAAAATGATGTTAGACAAAAAATAAAATCAATTTTCTTACTCGATCTCAAAATGAGTTGTGAGCAGCAGAGACAACTCGAAACATCAGTGACACACTTGGCCCAGGAGCTGCTAACACAGCGCAGGGGTGGATCAAGAAGTCCTGCAAAGGAGACGAGGGCCTTGAAGACGAGGAGCACGGTGGGCGGCCAGCGGAGGCTGACCACAGCCAGCTGGGAAGATCTTCGAGGCTGATGCTCTTACAGCTACACAAGAAATTTCCAAAGAACTCAAAGTCAACCTTTCTATGGTGATTTGGCACTTGAAACAAACTGGAAAGGTGAAAAGGCTCTGTAAATGGGTGCCTTATGAGCTGACTGCAAACAAAAACTCAATTTCTCAATCCAGTGCAACAGTGACGTGCAACAAAAAGTGGATTTTACACAACTGGCGATGACCAGCTCAGTGGTTGGACTGAGAAGCTGCAAAGCACTTCCAAAGCCAAACTTGCACCAAAAGAAGGTCCTGGTCACTGTTTGGTGGTCTCCTGCCGGCCTGACCCACTACAGCTTTCTGAATCCTGGTGAAACCATTCCATCCGAGAAGTACGCTCAGCAAATCGGTGAGATGCACCGAAGACGGCGATGCCTGCAGCCGGCACTGGTCCTCAGAGAGGGCCCGATTCTCTCCATCCGACACTCGCCGCGTAGCGCAGAGTGGCCCACATTCTTGCCTCATCCACCACATTCACCTGAACTCTCGCCAACCGACTATCACTTCAAGCATCGCGACAACTTCTTGCAGGGAAAACTCTTTCACAATCAGCAGGAGGCAGAAAATGCTTTCCCAGAGTTCACGGAATCCCGAAGCACAGATTTTTATGCTCTGGGGAATAAACAAAGTTACTTTTTGTTGGCAAAAATGTGTTGATTGTACTGGCTCCTATTTTGATTGATGAAGATGTGTTTGAGCCTAGTTATAATGATTTAAAATTCACGGTCCAAAACCACAGTAACATTGGCACCGACCTAATACAAGGTATTGAATACAATC EMBV3_33015 GCGGATCATCGCCTCCTACAGGCACAGCACCTCCATCTTTGACGACTTCTCACACTATGA Gene GeneID:538525|YTHDF1:XM_002692405:351_cdna UTR3_Alt 2 NULL GeneID:538525 13 GENE YTHDF1 NULL YTH domain family, member 1 EMBV3_37150 ACATCCTGACTCACAGGGACATGACAGAGAATCCTGAAAACGCAGTGGAAGAGTCCAGAC Gene GeneID:529566|CREB3L4:XM_002685996:349_cdna Constitutive 0 NULL GeneID:529566 3 GENE CREB3L4 NULL cAMP responsive element binding protein 3-like 4 EMBV3_32996 TCCCTGAGAGGTACACGTTCCCGGAGCCAGAGCCCAACACTCAGCTCACACTAATTCTGT Gene BVV0102_058083 + 0 NULL GK000016.2:29378655-29552151 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00072015 1 XLOC_043784 NonCoding TCONS_00072015 XLOC_043784 NonCoding NonCoding - 16:29513598-29514320 - TSS53859 722 1 TCONS_00072015_1 69 1 0 3.76887851643494e-05 0.000765462214363468 0 0 0 0 0 2.45763953087577e-05 0 0 0 0 0 0 0 0 0 0 0.000139048430297799 0 0 0 0 0 0 1.95165356633788e-05 0 0 0 0 0 noncoding GTGCTCTCCGGAATCTGTAAGCTCTATTCCCCAGGACCAGGAAGGCATGAAGTCAGGCCTGAGCTTTGGGGCTGGTTTCAAGTGCCCACAGGCTTCAGCAAAGAAGGAAAAGCCATTGGCCCCCTGCTCCTGATTCCCTCACCCATCAGGCCGAGTGGGTTCACCACGTTCTCGGCACAGTTTCAGACAAGCTCACGAAGCCTCCTGTCCCTTGAAAACCGGCCAGACCAGGAGGACGTGTGCCAGGAGTGATTCTGCTTGTGGTGCCAGCGACAGATCGCGACACTGCCTGCCTTGATTGAAGACCTGAGACTCTTCGGTGAGGGGGGCAGACTGGCCCCCGCTGGGAGCAGGCTAGGCCTCGTCCCTGAGAGGTACACGTTCCCGGAGCCAGAGCCCAACACTCAGCTCATACTAATTCTGTCCTGAGAGGCAGCTTAAGGAAGAACAGTGGAGATTCCAGAATCAGGAGCCGGATTGTCTGAGCTCAAGGCCCAGCCTCTGTAAAGACGATAATGATCATACCTGCTTCTAGAATCATAGCCAAGAGTGAGCTAATATATGTAATGAGACAGGGCTCAGCTCACAGTAGGTGCAGCGTAAGCGCGAACTGCCTTTATCTTGACACCCAGATTTGCCTCAATCTCCTCCTCGGCCCACTGGGGCCACACTCCATCCATGATTTCTTGCAGGTGCTGAAAACATGGGGCTGCATCTGGCTC TCONS_00066943 . 5' 37814 TCONS_00066943 . 5' 37814 EMBV3_26799 CAACCCGGACGACCCGCTCATGGCTGACATCTCCTCAGAGTTTAAATACAACAAGCCAGT Gene GeneID:505314|UBE2T:NM_001038034:31_cdna Constitutive 0 NULL GeneID:505314 16 GENE UBE2T MGC133853 ubiquitin-conjugating enzyme E2T (putative) EMBV3_39313 CCTCTTCGGGAGTTTCGACCCGGACATTCAGGAAACCAGCAATGAACTCGGAGCTTTCTT Gene GeneID:100301203|LRRC14B:XM_002696454:59_cdna Constitutive 0 NULL GeneID:100301203 20 GENE LRRC14B NULL leucine rich repeat containing 14B EMBV3_29945 CAGTATCTCAAAGACTACCTGACCAGTGCAAATGCTGTCTACGGTGCGGGCAATTCGAAC Gene GeneID:100335855|LOC100335855:XM_002685407:42_cdna Constitutive 0 NULL GeneID:100335855 2 GENE LOC100335855 NULL centromere protein A-like EMBV3_28132 TTATGTAAACCTGGGCCCCCTGGAAGTGAAGCTCATGACTGTGGAGAGCAAGAAAATGCC Gene GeneID:617342|CCDC83:NM_001038218:41_cdna Constitutive 1 NULL GeneID:617342 29 GENE CCDC83 MGC134289 coiled-coil domain containing 83 EMBV3_15060 TCTCAGCAGCCATCCTGGCCTTCATCTTCAGGGGAAATACCAAGGAGCTCACCAAGCACT Gene GeneID:783765|TSPAN18:NM_001080920:114_cdna Constitutive 0 NULL GeneID:783765 15 GENE TSPAN18 NULL tetraspanin 18 EMBV3_03655 TGCAGCCCCTGTCTCATCGACTATGATTTTGTGGGCAAGTTTGAGAGCATGGAGGACGAT Gene GeneID:100271926|CHST8:NM_001145992:486_cdna Constitutive 0 NULL GeneID:100271926 18 GENE CHST8 NULL carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 EMBV3_26565 AAGGAGCTGCTGCCACGGGAGTCAAGGTGGGAATCACATCCATAAACAATCACATCCCCT Gene GeneID:505820|SERPINA3-8:NM_001081712:178_cdna Constitutive 0 NULL GeneID:505820 21 GENE SERPINA3-8 NULL SERPINA3-8 EMBV3_20772 AGAACCAGGAGTACCAACACCTCATGGACATCAAGACCCGGCTGGAGCAGGAGATTGCCA Gene GeneID:514812|KRT19:NM_001015600:133_cdna Constitutive 0 NULL GeneID:514812 19 GENE KRT19 NULL keratin 19 EMBV3_28445 TGAGTGTGGGAGAGTCACTAAAGCCCACACACAGGGGGCACATATACCCCCATGAGGATG Gene BVV0102_386192 + 1 EMBV3_10195 GK000019.2:57126124-57139493 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03765 GCAGCTGGGCTCCTTGATCTTGGCAACAGACATCAACAGACAGAATGAATTTTTGACCAG Gene GeneID:522509|PDE7B:NM_001102068:26_cdna Constitutive 0 NULL GeneID:522509 9 GENE PDE7B MGC151559 phosphodiesterase 7B EMBV3_09219 GGGGCCTGAACATCCTCTTCTCACTCTTCAAATCCTACCTGCACTCTTGGGTCAGCTCAA Gene BVT0101_005423 + 0 NULL GK000002.2:46664677-46723404 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102403 TCONS_00105218 TCONS_00105221 TCONS_00105219 TCONS_00105220 TCONS_00105222 2 XLOC_061857 XLOC_062525 Coding TCONS_00105219 XLOC_062525 NonCoding NonCoding MMADHC 2:46650462-46681588 x TSS77707 921 1 TCONS_00105219_1 34 0.0705754614549403 4 0.970538152610442 0.0012929395025664 0.0006361852632522 0.00106798344843274 0.00188952388266197 0.00204368177039193 0.000126051831411257 3.6326285283707e-73 0.000379190561637607 0.00154135167335381 0.000231477915101971 0.000154010401305744 0.00021989735628407 0.000242547638037519 0.000516510689229817 1.49048460859807e-41 0.000286770716378805 0 0 0.0018512418343215 0.0011985550234516 0.000999253506115565 8.82287675482246e-05 0 0 0.000498858742368454 0.00171861005128054 0.00288702525271004 1.61401904930045e-06 3.59959932375826e-06 6.5279601449406e-06 XM_003586218.2 FRAS1 PREDICTED: Bos taurus Fraser syndrome 1 (FRAS1), partial mRNA. 4e-18 96.9 92.42 0.0705754614549403 0 noncoding ACAGGTCAAGGTGAAGCACAAGTCAATACACTCGAAAGCTGCAGAGGTCACGGGGTGGTCCCACAGAGTTTCCAGGGACCTCCCCAGGAGTTCCCATTTCCTGGTCCTCTTCTGTGATCAGACCTATTGCTTCCCGGACTTCTGTGAACTCCAGCTTTTCTGCTTCAAGTTGAAGTGGTGACTTTCTGTCCAATTCTTCACCTACCTGCCCTTGCAGACCAATCTTCACTTTCTTGCTTCTCCCTCCTTCAAGTCAAATAATCTACAGGCAAACCAGTCCACTCAGTGCTATGTGCTCTTCTTCACACAACATTTTCGGGGCCTGAATATCCTCTTCTCACTCTTCAAATCCTACCTGCACTCTTGGGTCAGCTCAAATTTTGTCTCCTCCGAAGACTCTAGACATGCCATAAGCGCTATGAATTGGAGCAGACATAAAGGGCAACAGAATAAAAAGTCAGTTTACTAATCCAGAGTGCACATGTATGGGGAGGATGATTAAGTAAAAAGCAAAGAAAAGCTCACTCTGCGCTATGAAATGCAAGAGCCCAGTGGAAAGGCCAACAGCTAAAGGCAACCCTGGACATCCAATAGCTTCTTCTGCTGGTTGGAATCACACCATCAAGGACCAACAATAGAGATCTACTATCAGAAATGACTGTAATTGATTTTTACATCTAACATGAAAGGCCGGACAAATTCCAACTCCTTCTTCAAGATCCAGATAAACTGAACCTCCTCCAGATGTCTCCAAAATGCAAGGCCTGTCTCCAGAGCATTCTGTCCACCTGAACATTTAAACATCCTCCCCTGGCCCTACAGTCTCATCATTAGGTTATTACTTAATGTATCATGGGCTTCCCTGGTGGCTCAGAGGTTAAAGCGTCTGCCTCCAATGCGGGAGACCCGGATTTGATCCCT TCONS_00102397 TCONS_00102401 TCONS_00102402 TCONS_00102403 r 3' 1321 TCONS_00102403 r 5' 0 EMBV3_37446 GCAGGGAAACTCTGGCGTCTTGTACTCCTGCTCTGCCTCCTGCTCTTTATATCTGCTGTT Gene GeneID:515291|RMND5B:NM_001075706:23_cdna Constitutive 0 NULL GeneID:515291 7 GENE RMND5B MGC142716 required for meiotic nuclear division 5 homolog B (S. cerevisiae) EMBV3_29116 GCCCTGGCCGCTCCAACGATGGCGCCTCAGACAATTTTGCTCATCGAAGTGAAGTTCGGA Variant GeneID:534363|NIPSNAP3A:NM_001080298:24_cdna 161^371 3 EMBV3_06418 GeneID:534363 8 GENE NIPSNAP3A MGC140274 nipsnap homolog 3A (C. elegans) EMBV3_26408 TCCAGGTGTCTATCTGCTGCAAGGAGGACAGTATTGGCCTCCTCATCACAGGCTGAAGAG Variant GeneID:615879|EFNA4:NM_001101249:218_cdna 555^832 1 EMBV3_22376 GeneID:615879 3 GENE EFNA4 NULL ephrin-A4 EMBV3_02101 CCATCGACGGCTTAGAAGATCTGGTACATGGAGAACTGTATGGACGGATGGACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_14492 TCTCTCTTTAAACTCCTCCCCCCACGGCCCATATTCACGGATTTGCACAGTGAAGACTTG Gene GeneID:505415|LOC505415:NM_001038035:50_cdna Constitutive 0 NULL GeneID:505415 5 GENE LOC505415 MGC134318 hypothetical protein LOC505415 EMBV3_19505 CTGACAGTGGGAATGTGAACTGGTGCAGCCATGGTGGAGAGTGGTTACGGAGGTTCCTTA Gene BVV0102_050550 + 0 NULL GK000007.2:45581889-45592772 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01341 ACACTCTCCAACCAGCTGCTGGGCCGAAAAATCCTACTTGACACACCTGGCCTCATCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37508 GGGGTCTATGGAACCAAAGGGAACACACTGCTCTCCTGAAAATTGAAGGTGTATATGCTC Gene GeneID:100295296|LOC100295296:XM_002697337:273_cdna Constitutive 0 NULL GeneID:100295296 23 GENE LOC100295296 NULL similar to ribosomal protein L35a EMBV3_34612 CTACTGTTTCTACCTGGCATGTTATGGAGAAGATCCTTTCTCCCTGGCACACAGTGGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30907 CTCCACCTGCAAAAGCTAATTGTGTAGCATGGCTGGGAGGAGCTATTTTTGGAGCACTTC Gene GeneID:511083|ACTR10:NM_001034400:62_cdna Constitutive 0 NULL GeneID:511083 10 GENE ACTR10 MGC128517 actin-related protein 10 homolog (S. cerevisiae) EMBV3_43590 TTGCGAAGAATCCAGGACAAAAAGGTTTAGGAACATCATAAACGATCAATACCAAAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35757 TCCTCCCTTCTGATGATGACATTTATGACTGTAAAGTGGAGCACTGGGGCCTGGATGAGC Gene GeneID:282494|BOLA-DQA5:NM_001012675:14_cdna Constitutive 0 NULL GeneID:282494 23 GENE BOLA-DQA5 MGC159552 major histocompatibility complex, class II, DQ alpha 5 EMBV3_28965 GCTGTGTTCATTAACCTGCACTCATCTGTCATCCAGGTGGAATTTATCTACCCCAGGGCC Gene BVV0102_066689 + 1 EMBV3_05177 GK000002.2:73168450-73293821 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20805 CCATATAGAAATGCTAATGAAGGAAATGCCTGGATTCCTCAGTCCCAGAAGAGGCTTGCC Gene BVV0101_077804 + 0 NULL GK000018.2:103427-183672 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161259 1 XLOC_098151 NonCoding TCONS_00161259 XLOC_098151 NonCoding NonCoding - 28:6652019-6652847 - TSS120591 828 2 TCONS_00161259_1 60 0.727053140096618 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000135147346519144 0 0 0 2.22789637691828e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 XR_229889.1 LOC101908361 PREDICTED: Bos taurus uncharacterized LOC101908361 (LOC101908361), 2e-130 470 93.83 0.370772946859903 0 noncoding CTGTGCCTGGGTCTCATCTTTGGTTTTCCTGGTCCCATTCAGCATCTGATGAGATTTCACATGTCTGCCTCCAGAGTTTCTTTTCTTCTTTACGCCCTGCGGTGTGAGTCAATTCAGAAACCCTGGTCTGATGATAGCCTCTGTTGTTGGCGGAATAATCACAGTCTCTGCTCCCTTTCCTCCGCACAATTGCTTTGGCCACAGTGTTTTCCTCTGATGACCCCCTGCTGAGGTCCTTTAATGGACCAGAACTTGGTGGTCTGGAGTCGACAATAAGAAAGTAAAGGAGAGAAAGAGGCTGATATTCCTTGGTTTACACAGAAAGCCAATGAAGCCCCTGCACGGGGCTTGCTCTGTTCATGGAGGCCTCAGGCGCCCTCTCGATGGGGTGAAGGCACAGAGCACCTTCTCGAGAGGGTCTTAGAAACCCGGGCAGGAAAGTGAACTCAGAGAGCCTCTGCGCTTCAGGGGATCAGCCTGAAAAAAAAGAGAGGGAGAGACACGGGGACCAGAGCTCTGATGGAGCAATGGTGTTTTAATAAACATGGTGTGGGCATATATACTGTCTTACAAAGTAGTTATTCTCAGCAAAGATAAAGATTAAAATTCCAGACTTAGAAAACATAGGCAATCCATATTAAAGAGAGAGATTTGTAAACAATCACTTTTACCATATGGTTCACAAGAAGGAAGAGGGTACTTATCACCATATAGAAACACTAATGAAGGAAATGCCTGGATTCCTCAGTCCACGGAGAGGCTTGCCTCTCCTCTTAATTCCTGAATATTCAGGAATTAATAAGGAGCAGAGAATTCCTGAGAGACCCA TCONS_00159999 . 3' 20042 TCONS_00159999 . 3' 20869 EMBV3_36159 TTCCCCTCACCACACCTGTGGCTGTTCCCACATCCCCTTGAGTATCCCAGGAAAAATAAA Gene GeneID:516070|DLGAP3:XM_002686486:570_cdna Constitutive 0 NULL GeneID:516070 3 GENE DLGAP3 NULL discs, large (Drosophila) homolog-associated protein 3 EMBV3_16609 ATCGCTGTGCCAAAGGAAACAAACACTGCAGTTAAAGGAACACCTTCCACGAGGTGGCTG Gene BVV0101_051298 + 0 NULL GK000029.2:41504720-41575956 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165178 1 XLOC_100452 Coding TCONS_00165178 XLOC_100452 Coding Coding AHNAK 29:41514079-41605018 = TSS123443 1015 1 TCONS_00165178_1 150 6 0.988904528359982 0 0 0 0 0 2.33275953934693e-06 0 0 0 0 7.32913173762445e-05 0 0 8.90666314553245e-147 7.19821910051838e-06 0.00058085599748705 0.000120454903992613 0.000167495470530781 0 5.66813272272582e-05 0 0.000406810781848862 9.83254499828402e-06 0.000389653927470797 0 0 0 0.000192241236380202 0 0.000386155601894342 XM_002699316.3 AHNAK PREDICTED: Bos taurus AHNAK nucleoprotein (AHNAK), transcript 0.0 1831 100.00 0.999014778325123 NM_024060.3 AHNAK Homo sapiens AHNAK nucleoprotein (AHNAK), transcript variant 2, 0.0 1106 83.81 0.999014778325123 TCONS_00165178_1 sp|Q09666|AHNK_HUMAN AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK; 4e-62 211 94.83 0.766666666666667 2 coding 0 0 0 0 -0.0724324060029379 0.581245079156266 0.000390723917045255 0.994118508093846 CCCGGCCACTCGGAGCAGCTCCGCCGCGGGGACTGCACCGCCCGCCCTGCCGGACCCGCCCCGACCGGGGCTCGCCGCCTGCAACAGCCGCAGCACCGCGACCTCGGGCTCCGCGCCGGCTATGGCTGTGCCCTGGGGCTGAGCGCGCAGACAGTGTGACCGAGATTCCCAAGAGATACCCTGAGGAGAGAAGAGGAAGGAGGGGCGGGCTCCTGGCAAGGCATCCGCTCCTGACCCAAGTCCTGCGAAGATGGAGAAAGAGGAGGAGACAACCCGGGAGCTGCTGCTGCCCAACTGGCAGGGCAGCGGCTCCCATGGGCTGACCATCACCCAGAGGGATGATGGCGTCTTTGTGCAGGAGGTGATGCAGAACTCCCCTGCGGCCCGCACTGGGGTGGTCAAGGAGGGGGACCAGATTGTGGGTGCCACCATCTACTTTGACAACCTGCAGTCGGGTGAGGTGACCCAACTGCTGAACACCATGGGCCACCACACCGTTGGCCTGAAGCTGCATCGCAAGGGGGACCGGTCCCCTGAGCCTGGCCAGACCTGGACCCACGAGGTCTTCAGTTCCCACAGCTCTGAAGTGGTTCTGAACCCACCACAGCCATCAGTCCTGGAACGCAAAGAGCAGAATAAACCCGAGGAAGCCACCAGCCAGGCCCAGGCAGAGTCAGTCTCCACCCCAAACACAGGGCTGTAGCCGAGGCCAGGAAGAAACCCGCCCCCTCCGAAGGTTGTTTTTGTGACGGTTCTTTGGAGCATTGTTCTAAAAATGGGAAATTACATATCGCTGTGCCAAAGGAAACAAACACTGCAGTTAAAGGAACACCTTCCACGAGGTGGCTGTTAGCGCCCCAGCCGGTTCTAGAGGCAGGACTGCTGAGTGCCAGCTGCTCCCGGAGCATTTCGTCACTTCCCAGGGGAGCGGGTTTGTAACCAGAGTGGGCTTTGGTGACAGGGCTTAGGTGATGGTTCCTCACTTATTTACTCAATAAACATCCTATCGAGCATC EMBV3_18172 ACTCCCCCTATGACACCTTTGTGAAGCTGGAGGGCTGGGAAAAGGGGGTCGTGTTCATCA Gene GeneID:519145|GLB1L2:XM_002693846:160_cdna Constitutive 0 NULL GeneID:519145 15 GENE GLB1L2 NULL galactosidase, beta 1-like 2 EMBV3_23835 TCGGAGCGGGGCGTTTCGCAGACTCCTAAGAGACCTTCAGAGAAGGCATGGCTTCCGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09301 CAGCAGGGCATGACGCCCTCTGCCAAGCAGCTGGTCCCGGAGCATGTGGTCATGACCAAG Variant GeneID:512971|POLR2E:NM_001038093:50_cdna 421^501 2 EMBV3_19623 GeneID:512971 7 GENE POLR2E MGC134612 polymerase (RNA) II (DNA directed) polypeptide E, 25kDa EMBV3_33074 TCTCCAAGCCAGCCGCCTACAAACAGTGCCACCAGGAAGTCTGCAATGACAAGATCAATG Gene GeneID:538131|ADAMTS17:XM_002696520:135_cdna Constitutive 0 NULL GeneID:538131 21 GENE ADAMTS17 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 17 EMBV3_15428 AGCGCTGCAAGAAGAGCTTCGCGCTCAAGTCCTATCTCAACAAGCACTACGAGTCGGCCT Gene GeneID:618261|SCRT1:XM_002692544:163_cdna Constitutive 0 NULL GeneID:618261 14 GENE SCRT1 NULL scratch homolog 1, zinc finger protein (Drosophila) EMBV3_38562 CTGGTAGGGTCCAGAGTTCTAATTCAGGGTTTTCCTACAACACGGTTTCTTCCTCAATCC Gene BVV0102_001202 + 0 NULL GK000001.2:57855631-58027116 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22166 AATTCCTGCTCCGGACAAAAGGAAGGGACTTTGTCTGCAGGGTTCAGGAGTCCTGTTGCT Gene GeneID:514508|BIRC7:XM_002692253:1550_cdna Constitutive 0 NULL GeneID:514508 13 GENE BIRC7 NULL baculoviral IAP repeat-containing 7 EMBV3_07125 GTGAGGAAGCATGAATACAGGCCACTGCAGATTTTTAGCATGAGGAAAGCCCTTCAGGGG Gene GeneID:768084|ZSCAN12:NM_001077138:40_cdna UTR3_Alt 3 NULL GeneID:768084 23 GENE ZSCAN12 MGC139538 ZNF96 zinc finger and SCAN domain containing 12 EMBV3_11832 CCAAAGAGGCCATGGAGCACCCGTACTTCTGTCTGTTGCTGTTCCTCCCACTTTTCCATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13938 CTCACTCTGTGAAGGAGGAGGCTAAGATTCTGTGGCGAGATGGAGCAGCTGTTGGATTTT Gene GeneID:781793|LOC781793:XM_002696522:141_cdna Constitutive 0 NULL GeneID:781793 21 GENE LOC781793 NULL similar to Predicted gene, EG434197 EMBV3_20405 TCTGCCCAGATTGTCTATGGATGTGCCTTCCTGCTTGTTCTTCTGCTGACCATCCTGAGC Gene GeneID:511982|LOC511982:XM_002695363:20_cdna Constitutive 0 NULL GeneID:511982 18 GENE LOC511982 NULL similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 EMBV3_11302 TGTCTTATGTCGTGAGGGCTCATCTGATGGGAAAAGCTACCAAGGCTGAAAGCCAACCTC Gene GeneID:509719|ASB6:XM_002691641:348_cdna Constitutive 1 NULL GeneID:509719 11 GENE ASB6 NULL ankyrin repeat and SOCS box-containing 6 EMBV3_35193 CATAGCAGCAGTGGTCCTCCTGGCCTTCATTGTCACTGCCTGTGTGCTTTGTTACCTGTT Gene GeneID:787024|LOC787024:XM_002686387:222_cdna Constitutive 0 NULL GeneID:787024 3 GENE LOC787024 NULL hypothetical LOC787024 EMBV3_21183 GACACATGCCACATTCATGAGCTCACATGCACATATGCACACATACACGTTAGATAAGGG Gene GeneID:511770|FEZF1:XM_002686910:125_cdna Constitutive 0 NULL GeneID:511770 4 GENE FEZF1 NULL FEZ family zinc finger 1 EMBV3_20019 GTGCTAGCAGCAGTTGTAAAGTAGCCAAAAGCCACATTGTTTATTTACTGGTCTGTGGCC Gene GeneID:100138040|SOS2:XM_002707711:257_cdna Constitutive 0 NULL GeneID:100138040 10 GENE SOS2 NULL son of sevenless homolog 2 (Drosophila) EMBV3_16091 GGTGATGGTTGGGAATGGAGAGCTTCAAAGGAGGCTTTAGATCCCCCCCTGGATGATTTG Variant GeneID:787344|ATG10:NM_001083531:14_cdna 158^265 3 EMBV3_23004 GeneID:787344 7 GENE ATG10 MGC138057 ATG10 autophagy related 10 homolog (S. cerevisiae) EMBV3_41382 AAACTGCATTTCAGAAGATCGCCAGCTGATTCCCACAAACAGGGGCCTGGGGTGATCCTG Gene GeneID:521721|LRRC20:NM_001100387:326_cdna Constitutive 0 NULL GeneID:521721 28 GENE LRRC20 NULL leucine rich repeat containing 20 EMBV3_42956 AGAGTCTGCCTGCTGTGATGTGCTGCTGGGGGCAGGGTTCCCACTGTCAAAATACATGTT Gene GeneID:282107|UBE2A:NM_001105325:5_cdna UTR3_Alt 1 NULL GeneID:282107 X GENE UBE2A BHR6A HR6A MGC127256 ubiquitin-conjugating enzyme E2A (RAD6 homolog) EMBV3_42232 GAGTGACCACTTCTCAGTCAAGGTGGAGCAGGGCAAGTATGTTAGCATGACCATCAAGGG Gene GeneID:524077|MYOM2:NM_001038140:12_cdna Constitutive 0 NULL GeneID:524077 27 GENE MYOM2 MGC128742 myomesin (M-protein) 2, 165kDa EMBV3_24507 CTCGCGCTCCTCTTCCTGGTCCTGTCTGCTGGGTCAGGATTTACTCAAGGAATAAGTAAT Gene GeneID:100294816|LOC100294816:XM_002698624:11_cdna Constitutive 0 NULL GeneID:100294816 27 GENE LOC100294816 NULL hypothetical protein LOC100294816 EMBV3_41664 AACTGGGTGGTTGTCGAGGGACTGAATACAGAAACCCACTGAAGTGGAGTGGAGATTCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16465 GAGTGAAATCTCCTAGAAGGACAGGCTGGAAAGGAAGTTCGAGACTAATATGCTTGCTCC Gene BVV0102_213400 + 1 EMBV3_17561 GK000003.2:113809-148929 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174970 1 XLOC_104753 NonCoding TCONS_00174970 XLOC_104753 NonCoding NonCoding - 3:139525-139888 - TSS129729 363 1 TCONS_00174970_1 58 1 0 3.74811327620668e-05 0 0.000254931559828495 0.000114382218555952 0.000163211959854628 5.9124866841266e-05 8.03265219822687e-05 4.88819255960674e-05 0.000521662139689693 9.06777582162538e-05 0 9.85037397905319e-06 3.16174577783672e-05 0 0 0 0 0 1.97545535080073e-05 0 0 0 0 0 0.000305387843215178 9.70449402565342e-05 4.84227902606253e-05 0 1.33735838947365e-05 0 XR_083239.3 LOC787549 PREDICTED: Bos taurus coiled-coil domain-containing protein 3-like (LOC787549), misc_RNA. 0.0 641 99.17 0.997245179063361 0 noncoding CTCAATATTTAAGTATATACTGTATCCAAAGGTCTTGAAATGTTAGGAGTCTACACAGAAGACAGATAGTAGATACAGATCAGATCTAAACCTAAGTAATTCACATGATAGAGATATGAATAAAATGCCAGGAGGCTCCAGAAAAACCACCGTGGTCGGGGTGGGTTGCATCAAATAAGTAAAGGGAAATGGAGAGAGAGAAGATAAGGAGAAAAGATAACTGGAAAGGATCTCTTCTTATTAACGTTTCTGCTACAAACTTCTGGAGCAAGCACATTAGTCTCGAACTTCCTTTCCAGCCTGTCCTTCTAGGAGATTTCACTCTATGGACTTCAGATGGTCAGCCTCAGCACCTCAGGCTTC TCONS_00168179 . 5' 55992 TCONS_00168179 . 5' 55992 EMBV3_01280 GAGAAGTGGCTACCACCCTCAAAGCTGGGAAACACATGGGGAAGGATTCTGGTTACTAGA Gene BVV0101_044808 + 1 EMBV3_07130 GK000001.2:71623387-71629567 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35898 CACACCCACTCAGCAATAACCATTTTGGACCTGGTGGGGAGAGGAAGAAGGAGGGTAGAA Gene GeneID:521504|LOC521504:XM_002687068:214_cdna Constitutive 0 NULL GeneID:521504 4 GENE LOC521504 NULL similar to jumonji C domain containing histone demethylase 1 homolog D EMBV3_28029 CAGCTCTTCTTGCTGCTCCTGAGCCTCACACTGGCCCTCCACAACCTCTAGCTCCCACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28324 GACTGTCTGGCCTTGATCCTTTCCACCATGAAGCCTTTCCCACCCAAGGACGCTGTCAGT Gene GeneID:521057|ANKRD52:XM_002687580:642_cdna Constitutive 0 NULL GeneID:521057 5 GENE ANKRD52 NULL ankyrin repeat domain 52 EMBV3_22309 CAAAGCCATCATCTTCTTTGACCCAGATGCCAAGGGGCTGAGTGACCCGGGCAAGATCAA Gene GeneID:509200|HNF4A:NM_001015557:967_cdna UTR3_Alt 2 NULL GeneID:509200 13 GENE HNF4A NULL hepatocyte nuclear factor 4, alpha EMBV3_40258 CCGTTTTGGCTGTGCTGGGTCTTTATCACTGTGTGGCTTTTTCTACCTGCAGTGAGTAGG Gene BVV0101_040008 + 0 NULL GK000018.2:63990673-64014210 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06950 TGTGCAACTCTTCCAGACTTATTCCATAAAGCTCTCCTAGCATCACTCACACTACATTGC Gene GeneID:282041|ROCK2:NM_174452:33_cdna Constitutive 0 NULL GeneID:282041 11 GENE ROCK2 NULL Rho-associated, coiled-coil containing protein kinase 2 EMBV3_17012 GTATATGACCACAGGCTGGAAGGGGACTTTGCCCAGCATGTATTTGACGTGACTCAGACA Variant GeneID:282218|DNASE2:NM_001075127:8_cdna 718^954 3 EMBV3_29291 GeneID:282218 7 GENE DNASE2 MGC140819 deoxyribonuclease II, lysosomal EMBV3_09484 CTTAGGACCAAGCACAAGTGAAGTAAATGACGGGATGCCTCTGATCTCCACTGTCAGCAG Gene BVT0102_036836 + 0 NULL GK000022.2:60211028-60217807 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129376 TCONS_00129378 TCONS_00129377 1 XLOC_078106 Coding TCONS_00129378 XLOC_078106 Coding Coding SEC61A1 22:60216356-60229406 j TSS96260 2099 1 TCONS_00129378_1 449 12 0.84006437274887 0.0071422358389949 0.00266021964032253 0.00803061708487501 0.00385378854990787 0.00225030220812681 0.00310835400708456 0.00250271482996036 0.00494362095845418 0.00317032306657039 0.00147549500988704 0.000669151720190536 0.000468111378746942 0.00120321654182592 0.000518126607509485 0.000436434947813601 0.0127599563772661 1.52378810707245e-05 3.57656061057024e-09 0.00494426509828063 0.000306779456823117 2.3159701685872e-06 0.00152872268191445 0.00057933200710178 0.00326472573853723 0.00296652940274628 0.00431372919279768 0.00430256439867509 0.000100340290073614 9.40775852010026e-05 2.03695871400242e-08 NM_001040504.1 SEC61A1 Bos taurus Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA. 0.0 2269 99.76 0.602667937112911 NM_013336.3 SEC61A1 Homo sapiens Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA. 0.0 1568 87.20 0.609337779895188 TCONS_00129378_1 sp|Q5EA68|S61A1_BOVIN S61A1_BOVIN Protein transport protein Sec61 subunit alpha isoform 1; 0.0 851 100.00 0.922048997772829 2 coding 1 1 1 1 -0.0948275381154929 0.413572456636828 0.0101538724673101 0.846932551847096 GGCGCGGCGCTCCAGAGCAGGCCCGGCGGCAGCGGAGCCGGAGCGCGACCCAGCCGGAGCGAGACCTGGAGCCGAGCAGCCGCCGCCATGGGGATCAAGTTTCTGGAAGTCATCAAGCCCTTCTGTGTCATCCTGCCCGAAATCCAGAAGCCGGAGAGGAAGATCCAGTTCAAGGAGAAGGTGCTCTGGACCGCCATCACCCTCTTCATCTTCCTGGTGTGCTGCCAGATCCCCCTGTTTGGAATCATGTCTTCAGACTCAGCTGACCCTTTCTACTGGATGAGGGTGATCCTCGCCTCCAACAGAGGCACGCTGATGGAGCTGGGCATCTCGCCCATCGTCACCTCCGGCCTCATCATGCAGCTCTTGGCTGGCGCCAAAATAATTGAGGTTGGTGACACCCCGAAAGACCGAGCCCTCTTCAACGGAGCCCAAAAATTGTTCGGCATGACCATCACCATCGGGCAGTCTATCGTGTACGTGATGACGGGGATGTACGGGGACCCGTCCGAGATGGGCGCCGGAGTCTGCCTGCTCATCACCATACAGCTCTTTGTGGCTGGCCTGATTGTTCTGCTTCTGGACGAACTTCTGCAAAAGGGGTACGGCCTGGGCTCTGGGATCTCCCTGTTCATCGCCACAAACATCTGCGAGACCATCGTGTGGAAGGCGTTCAGCCCCACCACCGTGAACACCGGCCGAGGAATGGAGTTCGAGGGCGCCATCATCGCGCTGTTCCACCTGCTGGCCACCCGCACCGACAAGGTCCGAGCCCTGCGGGAGGCGTTCTACCGCCAGAACCTCCCCAACCTCATGAACCTCATCGCCACCATCTTTGTCTTTGCGGTGGTCATCTATTTCCAGGGCTTCCGTGTCGACCTGCCCATCAAGTCGGCCCGGTACCGGGGCCAGTACAACACCTACCCCATCAAGCTCTTCTACACGTCCAACATCCCCATCATCCTGCAGTCCGCCCTCGTGTCCAACCTGTACGTCATCTCCCAGATGCTGTCCGCCCGCTTCAGTGGCAACCTGCTGGTCAGCCTGCTGGGCACCTGGTCTGACACCTCCTCCGGCGGGCCGGCGCGGGCCTACCCCGTGGGGGGCCTCTGCTACTACCTGTCCCCGCCCGAGTCGTTCGGCTCTGTCTTGGAAGACCCCGTCCACGCCGTGGTGTACATCGTGTTCATGCTGGGCTCCTGCGCCTTCTTCTCCAAGACGTGGATCGAGGTCTCGGGCTCCTCCGCCAAGGACGTTGCAAAGCAGCTGAAGGAGCAGCAGATGGTGATGCGGGGCCACCGAGAGACGTCCATGGTCCACGAGCTCAACCGAACATTTTCACTGTACTTAGGACCAAGCACAAGTGAAGTAAATGACGGGATGCCTCTGATCTCCACTGTCAGCAGAACTGCCCAGCAGAGAGGAGATAGGCTCTAGATCCACGGTGACACCAGGGTCAGAGACATTGGGTTTTGCTAAGTTTCGCCCATGTTTGGTATAAAAAGACAATTATGCCTGAGACAAATTCTGATTGCAATAATAGGTGACCTAGATCTTAGGAATTACCACCTTCTCAAAGGCCTTTAGGGAAGCCCTTCTTGGGGGCCAGCAGAGTTAGGTAGCGCAGCCTGAGGGGTGCATCCTGCCCCTCGGAGACCAGACCCCACCAGCAGCGGGCACACGGTGCCTCTGAAGCACAGCCAGTACACGTGCCAAGTTTGGTGCCCATCTGAGCCCAAGGGCCCCAGGCTCACTGGCTGTGCTGCCCAGGGAACAGACCAGCCGAGGGGCGAGCGGACTCGCCCAGCACCACCTGGCGAGTGGACAGCAGAGCCAGGATGGGCCCCGGCCTGTCCCCCTCGGCCAGGGCACCCACCACACCACACGCGGCCTTGTCCGACCCAGTCCTACGCGGAGACCTGACGCCCCGCAGCCCTGCTGCAGCCTCTGACCACGCACGGCTCGGGCGCCTGACCTGCAGTCACTGGTCATGGAGGCGGGCTGACCTCGACTTCCAGGGGACTGTCACTGTGGACGCCCAAGCGGCATAACTGAGATAAGGTGAATAAGAACAAATAAAGCCAACTTTTTACAAGCTG EMBV3_41745 GGGAGCTCTCCTCCATTCTCTGTGGTGACCTAAATGGGAAAGAAACTAAAAACGAAGGGA Gene GeneID:541230|VPS45:NM_001083501:148_cdna UTR3_Alt 2 NULL GeneID:541230 3 GENE VPS45 MGC139503 vacuolar protein sorting 45 homolog (S. cerevisiae) EMBV3_40534 AAAGAGATTGTTCTGAAGACAGTGCTCCAGGGGCGTGGACAGACTGCAAGGCACTGAGAA Gene GeneID:515933|RNF8:NM_001046216:35_cdna Constitutive 1 NULL GeneID:515933 23 GENE RNF8 MGC137933 ring finger protein 8 EMBV3_41318 GTGACACGTATCCTTTGTTAAAACTAGCCTGCACCGACACCCACATTACTGCCGTCACAG Gene GeneID:100294956|LOC100294956:XM_002693605:106_cdna Constitutive 0 NULL GeneID:100294956 15 GENE LOC100294956 NULL similar to olfactory receptor 1264 EMBV3_30927 TGCTTCCGAGGTAGGGTAAGTGAAATAATGCTCATACTGGTTTCTAATTTTGAAGGAATG Gene GeneID:540503|HEATR5B:XM_002691283:364_cdna Constitutive 0 NULL GeneID:540503 11 GENE HEATR5B NULL HEAT repeat containing 5B EMBV3_22160 TCCTGTGTCTACAGAGATTCCTGCTTTTGGCTCTCAGGATATGCAGTTTCCTTCATCTGG Gene BVV0102_353189 + 0 NULL GK000004.2:40634932-40775800 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19266 TGCTGATGGCGGGGAGCGGCGGCCGCGGAGTATTGGACCAAGTACGGACCTTTCTCCCAC Variant GeneID:616791|C5H12orf45:NM_001038689:82_cdna 147^233 2 EMBV3_36335 GeneID:616791 5 GENE C5H12orf45 C12orf45 MGC133846 chromosome 12 open reading frame 45 ortholog EMBV3_17596 CTGGGCACCTGGAAGAGCGACCCTGGCCAGTTGGTGCCTCGGGAGGAGCTCTTTGTGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19086 CTGTATGTGATCTTACGGATTATTCAACTATCAAAAGAAACATTCATCCTTTAACTTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36447 CTGGGTCCAAGGAGATCGAATATAGACGTCAGTACCTAAGGAGGGCTGCTACTTGAGTTC Gene GeneID:100336796|LOC100336796:XM_002694295:384_cdna UTR3_Alt 2 NULL GeneID:100336796 16 GENE LOC100336796 NULL hedgehog acyltransferase-like EMBV3_14340 TATGGCAATAACTCCCCTGTGGGCTTGGGCAGTCAATGAGAAGTCCCGTCCTCCAAGGCT Gene BVT0102_144953 + 0 NULL GK000019.2:30322099-30400966 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096327 TCONS_00096328 1 XLOC_057939 Coding TCONS_00096327 XLOC_057939 Coding Coding - 19:30378253-30384691 - TSS71609 1525 2 TCONS_00096327_4 156 2 0.763399098959142 0 0 0 0 0 0 0 0 0 2.95518810073776e-06 4.3715377806928e-07 0 0 0 0 0.0198130087907669 0.0272658558703881 0.00819363003662604 0 0 0 0.00479788550565862 0.0038834171734554 0.0103157323290376 0 0 0 0.00165019233356774 0.000343794091386083 0.00291137424075987 XR_238672.1 LOC101905715 PREDICTED: Bos taurus uncharacterized LOC101905715 (LOC101905715), 0.0 2596 100.00 0.942950819672131 NR_036581.1 LINC00675 Homo sapiens long intergenic non-protein coding RNA 675 (LINC00675), non-coding RNA. 1e-77 295 65.50 0.914754098360656 TCONS_00096327_1 sp|A9JSM3|TM238_MOUSE TM238_MOUSE Transmembrane protein 238; 2e-15 70.1 48.61 0.578947368421053 1 coding 0 0 0 0 -0.163996968267894 0.169584894748094 -0.000385881763138363 0.994698035814403 AGTTAAGAAATATCTTGCCCCACTGGCTGCGCGCTCATAAAGGGACATCCACCTGTACTTCCGTGTGGCTCCAGAAAGGGCGGCTCTCTCTCTCTCTTGCTTGCTCATGCCCGGCGGGGAGAGAAGGGAGCGGCTGGCAGCACCACCCCCTGCCCGTGCAGGCCGGACTGGGGAGCACAGCCCGGCCCCTCCTGCCTCTGCCTTCCAGGCGATGCTCCCGGGGAAGCTGTGGGGAACGTGCCGCCTCGGACGCTGTGCTCTCTTCTTCGGCCTGGCCCTCCTGCTCGACGTCGTGGGCCTGGTCCTTCTGCTCGTGGGCATCTTTGCCTCCCTTGACTTCTGGGACTTCTTGATCTACACGGGGTCCCTGATCCTGGCTTTCAGCCTGCTCTTCTGGATCGCCTGGTACACCCTCAACATGGAGGTGCCTCTTGAGAAACTGGACTTGTAGTCTGGCCCTGGGCAGAGGAGGAGGGACGTGGGCTTCCTGGCAGGTGGAGGAGCGCAGGGCTATGCTGCCCAGCCAGGGACCAGCCCAGGTGCCATCTGATGGAGAAGTAGCAAACAGACGTCCTGTCTCTGCAGCACCTCCTGTAACAGAACCCACAGGAGCCAGGGGCTTTCAAAACACCCACCAGGATGTCCCGGGATGGTTATGAGGGCCAGGCTCCATCAAGACACCCGAACCCCTGCCCCTGGCCACTGGCTGACTGCTGCTGGCGCCCCAACTGTCTGTGAGGGTCTGGAGAGCCCCTAACATTCACACAGTGGGGTTTTATGGCAATAACTCCCCTGTGGGCTTGGGCAGTCAATGAGAAGTCCCGTCCTCCAAGGCTCCTCTCATTAATGTCCCTTAAAAAAAAATTATTGGAACCAACTATAGAAGTCCAAATGAGATTTCTTCGAGCATGCATCACATGGAATTACTGCTCCTTCAGCTCTTCAGACAGACTGTGTGAGCCCCTGGATGGTCTACCTCACTCATCCTTCCATGTCGTCCAGTCAGCACATGGTGCATATTTCAACTTGCCAGCTGACAAGGCAGATGCAGAGCCAGTGTTGAGGGCAAGGGCCCCCTTCCTTGGCTCTGGACACCGGGAACCACCAATGCTGCCCCCGACTTGCACAGCTGGACCATGGTGGGGTGGGGAGCTCACGTCAAGCTTTTGGTCAAATGAAAGCCTCTGGGGTTTTTCTGACAAGCAAGCTGGGCTCCGCTGCACTGTCCTTGAGTCACTCATTTCTTGATCCTAAGAGCAGTATTCTATTTTTATCTTGATTCAAGTGCATCTAATTCAGTGCAACCCAACTAGAGTACTTGGATCGGGGCGGGGGGCGGGGGCAGGGGGGGTCAACCTTCACAAGCTCATCATCACTAATTTATATTTTCCACGGTCTAATTTTGTACTTGTTATTTATTTGTCACCCAAACCGTGTATGTGTTTCTTAGACGCTGCCTCAGATCTTTTTCCGTGTGAGGTAGTTACCTAAATAAAAGAGTCAACTGGCCTCTTGTTTTAACTCG TCONS_00096329 s 3' 21723 TCONS_00096329 s 3' 16276 EMBV3_02887 CTTAAGAGTGTCCGCTAAGAGACAAGTGTCGAACGTGATGAGAGAGAGGCCCAAATTCCC Gene GeneID:517909|SGK2:NM_001075760:1108_cdna Constitutive 0 NULL GeneID:517909 13 GENE SGK2 MGC139463 SGK3 serum/glucocorticoid regulated kinase 2 EMBV3_14026 AGTGAAAACAGATCGGCCTTTACCAGAGAATCCCTATCACTCAAGAGCAAGGCCAGAGCC Gene GeneID:327710|NDUFA8:NM_175826:42_cdna Constitutive 1 NULL GeneID:327710 11 GENE NDUFA8 MGC127844 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa EMBV3_10668 CTCTGAGTGCTCTCCTCCCCAGTCCGTCCTCATCATCGCTAATCTCAATCACCAGAATGA Gene GeneID:509296|GSDMB:XM_002695962:280_cdna Constitutive 0 NULL GeneID:509296 19 GENE GSDMB GSDML gasdermin B EMBV3_10899 CTGAGGTACTGGAAACTGCCGATACCCTGAAGAGCTGTGTTGATGAGAAGTTGACAGCGG Gene GeneID:100337464|LOC100337464:XM_002695008:238_cdna Constitutive 0 NULL GeneID:100337464 18 GENE LOC100337464 NULL Major allergen I polypeptide chain 1-like EMBV3_09577 CGAGGCACTTGGCCTTCCTCCTTCCCTGATAGAAAATCCTCATGTAATCAATGTCTACCC Gene GeneID:534141|AVL9:XM_002686833:25_cdna UTR3_Alt 2 NULL GeneID:534141 4 GENE AVL9 NULL AVL9 homolog (S. cerevisiase) EMBV3_01961 GAAAGACCCTGATGCTGGGACAGATTTGAGGGCAGGAGAAGGGGGGTAACAGGATGAGAT Gene BVV0102_386195 + 0 NULL GK000011.2:98170671-98174562 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36347 CCTTGCACAGGAGCGGGAGATAGTTGGATTGAGAGAACAATAGACTCACCGCAGCTACAG Gene GeneID:514364|LOC514364:XM_002685686:335_cdna Constitutive 1 NULL GeneID:514364 2 GENE LOC514364 NULL similar to eyes absent 3 homolog (Drosophila) (predicted) EMBV3_27914 TGCAAGTGTGAGTGATGATCATACATGCAGTTACCCTCAAGATAAGAGACCTGTCCACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14009 ATTTACAGCTGACCCTTAAACAACGTCGGGGTTTAGGGATGCCAAACCTCTGAACAGTCG Gene BVV0102_278394 + 0 NULL GK000005.2:12714499-12816251 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37422 AGACTGATCCCTCTGGTACTTATCATGCTTGGAAGGCAAATGCAATAGGTCGAAGTGCCA Gene GeneID:614703|PSMA8:XM_002697717:27_cdna Constitutive 0 NULL GeneID:614703 24 GENE PSMA8 NULL proteasome (prosome, macropain) subunit, alpha type, 8 EMBV3_11320 CTACAGTGCTTAAAAAATACATTGTTGCTTAGTTGGGGAGTAACAGTTTCTAGTTTTTGG Gene GeneID:517459|GABRP:NM_001015618:14_cdna Constitutive 2 NULL GeneID:517459 20 GENE GABRP NULL gamma-aminobutyric acid (GABA) A receptor, pi EMBV3_10924 TGTAACATCTCGCTGTGTCCCAAATTAAGTTCTGCCAAAGTGCTCTTGTGTACATTGGTT Gene BVV0102_007432 + 0 NULL GK000006.2:37898526-37953763 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203005 TCONS_00203003 TCONS_00203004 TCONS_00203009 TCONS_00203000 TCONS_00203007 TCONS_00203006 TCONS_00203010 TCONS_00203008 TCONS_00203002 1 XLOC_124078 Coding TCONS_00203010 XLOC_124078 Coding Coding PPM1K 6:37888333-37900263 j TSS152173 6156 1 TCONS_00203010_4 194 0.0320012995451592 5 0.484365831167742 6.79071178441567e-14 1.6104284222393e-17 1.95960702385185e-14 2.04145714455262e-11 5.41336842476227e-35 6.56320870731895e-07 1.2247009723413e-19 1.03432503444523e-36 2.31054827911904e-25 0.000122232147561274 1.7944398398951e-05 0.000251478520177619 7.07107675701357e-05 5.06232019287902e-05 2.32125430900097e-05 0.00358111251070143 0.00114407313636922 0.00470880522188243 1.25838948950893e-14 5.49250100831897e-14 3.28847762861203e-14 0.00260450168365473 0.00170150568920808 0.002086223460478 3.62126992910143e-31 2.90937215850946e-28 5.23577315988925e-06 0.000507065356973741 0.000417717128177706 0.000535790721618833 XM_005207798.1 PPM1K PREDICTED: Bos taurus protein phosphatase, Mg2+/Mn2+ dependent, 1K (PPM1K), transcript variant X1, mRNA. 0.0 7847 100.00 0.706627680311891 NM_152542.4 PPM1K Homo sapiens protein phosphatase, Mg2+/Mn2+ dependent, 1K (PPM1K), 0.0 1108 83.82 0.164879792072775 TCONS_00203010_4 sp|Q2PC20|PPM1K_BOVIN PPM1K_BOVIN Protein phosphatase 1K, mitochondrial; 5e-139 397 100.00 0.979381443298969 1 coding 0 0 0 0 0.126045454245875 0.561564554902742 0.0328044190061417 0.510863970313875 GCAAAAAATAGGGACAGCATTGGAGAGATACTCTTATTGTGCTGTTACTGCTTCAACTCGTTCCTCTGATTTAGTGTTTATGATTCACTCATGTCTAGAACATCTTTTTGGTAAATATTGAAACTGTATTTGTTTATCCATATTGTTGACACAGTTGAATAATTTCTGGGTGGGGGAGGTTATACTTAGAAAAGTACAGCTTGATTCTTTATGTTGCCATTCAAAATCTTGATCATTTTTTCTTTTGATATATTGACCTGCAACACTGGGGGAAAGAGAGAGCTGCAGAAACTCCCATTTTATGAATTACATAAAATTGTAAACGTTTTTTAGCACTCAAGAGCCTTGCTAGCTTTTATTTAAACAATTAAATTAATCATTCTATTCAGGAAATACCGTCTAGATCCTAAAATCCCTGCATTTACCATTAACAAATAAGCTACTCCTTGTATCTGGTATAGGAGGTGCTTTGATTCCTTTTGATTTATATTTTAATGCTAGCAGTTTGGTAGTATACTGTAGTTTATATCCTCTCTAGTATGCTCTAGTATGCTATACAAATTATTCAGTGCTCTACCCATGAATTTCCCTTTTGTTACTGGGACAATTCTGATACTGATACCAAACAAATTTACAGTGTATTTTTTTCAACTCAGTAAAGGTACTGATTTACTCTTCAAGACTAATTGGCTGAGCCTGTGTGTATGTCACCACATATGTGTCTTGGTGCACATACATTTGTATATGGGCTTTCCTACCTTGGGAAGACACAAAACTAAGAAGTGTTATTCTGTGATGAAGAAAACAGACTCAACTACAAAATACCATCAACTTGGTCAAACTGAGTTTTGAAATCATTGACTTGGCATCTCCTGGAATATTATGTAATTTGCTACTGAACATTTCACCAAAATAAAAACCCTTCCCCTTATTTTGCAGCTCTTTCTCTACCCTTCCCTGTGTTGCAGGTTTGTAATGTTTGAGCACAATTCCTGGGTGAATTTCCTATTTGCCTCTGTGCGTGTTATTTGTGGCAGAGAACTGTGCCTGGTCAGCAGCTCTAGACCTGGAGCCCGTGGACACTATATGCTGGGCTTCAGTGGAAAGAGAGATCTGCTTAATTTTGTCCCAGGTGAAGGAGTCCAGCGGTTCCTAGCCTGGACTACTGGAAGGTTCCCACATCCTCTTTGTCCCATTAGTTGAGATGACTTGCAGTAGAAAATGTCCACAACGCTTCTGACCTCTGGGACTACTGCAACAGTAGCCCTATTGAGAGATGGTATTGAACTGGTTATAGCTAGTGTTGGGGACAGCCGAGCTATTTTGTGCAGAAAAGGAAAACCCATGAAGCTGACCATCGACCACACTCCAGAAAGAAAAGACGAGAAAGAAAGGATTAAGAAATGTGGGGGGTTTGTAGCTTGGAATAGTTTGGGACAGCCTCACGTGAACGGCAGACTTGCAATGACAAGGAGTCTCGGAGATTTGGATCTTAAAACCAGTGGTGTGATAGCAGAACCTGAAACAAAGAGGATTAAGCTACATCATGCTGATGACAGCTTCCTGGTCCTCACTACAGATGGAATTAACTTCATGGTGAACAGTCAAGAGATTTGTGACTTTGTCAATCAGTGCCACGATCCCAATGAAGCAGCCCATGCAGTGACTGAACAGGCAATACAATATGGTACTGAAGATAACACGACTGCAGTAGTAGTGCCTTTTGGTGCCTGGGGAAAATACAAGAACTCTGAAATCACCTTCTCATTCAGCAGAAGCTTCGCCTCTAGTGGACGATGGGCCTGATTGCTTGCTGGGACTTGGAGTTTCTGTGCAACAGTTTTTCACTGAGTGTATCAAGAAACTGATTAGATTTAAAAAGTGAACTGTAAGTGGTGACCCTAGAACTCACTAGACCAGTACATAAATCAACATAAACTTAGTAACCATCTACATAGTAGTTTTTCATAAGTACCTGTGATATTTATGTTCAGCTAACTGTATATACTCAGAATAAATATGTGGAATTCAGATACTGTGAGTGAGCCTCTGCGTTAAGTGAGCAAATGAAACATGGTTTTGATACACTTGCTGAGTGTTAAATTTCTAATTTTTAAAACTTTTAAGCAGCTGTGAGCTTCTTTTGATCATTTCTAATCTTTATTCATTTGACCAGGTTCTTGCCTTCAAGTTCTTCAAAACTAGTCAATATTTTGATGGCTACTCAATGTGTTATCTGCAAGTGTTTACTATATTTTGTATTCTGCATCACTTGCTGGTGAACTTAACAATACAAAAGAAATTAATTCGGCTAACATGACACTGTTAAAATGTATACATATGTACTACAGTGCACTTAGATATTTCAGCTGTGTCACCAGGTCTCCCCTATGTGTGCTGTACTAAGTTGCTTCAGTCATGTCTGATTCTGTGCCCCTGTGGACTGTAGCCCTCCAGTCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTTGACTATGTTGCCATGCCTTCCTCCAGGGGTCTTCCCGACCCAGGGATCGAACCTGCGGCTCCTGCACTGCAGACAAGATTCTTTACCTCTGAGACACCAGGGAAATCCCAGGTCTGTCTTGCCCCCGCTCAATTCATTCCTGTTCTTCTGTAGCTAATATATAGCTGTGACTATTCATTCATATCGGAAAAGAATGTCCAATAAAGAGTTCTTTGGTCAAAGCTATACAAAGTACATCTGATAGTATCAGGTATTTTGTATGAAGTTTCTATTTGTTATCTCTAATCCTGAGTTTTGTGTTCTGTATATAGTCTGTTTATATCACTTTTTGTATACGGTAAGCAAGTCCTTAAAGGTAATTTGTCCTTAAAGATAATCCCACATTGACTGATAATTGCTACAGACATAGCTTGAGGTTTATGTCTTCTTTTTCTAAGACTCATAAGAAAGAATAAATCTTAAAGCATTATCTATTTCAGCTTTCTATGTAATTTAGGGGTGTAAAACTATATTTCCTTATATCTGTGTGTAAGTTTACTGTTAAAATGTGAATCCCTAAATATGTGTATGCAGCAGTTTATTTCTGCAGACAGTGTAAATTTGTTATATGTAGGTATATGTACATATGTATATTTTGGACTAATGGAAAATGAAAGGGAACAATCTTTTATAGCTCCTTCACCAGTTAGCTGTAGATTATTGATACATTTATCTCTAAGAACTCTTGACAAACTGAGGGAAGTTTTGTAGTGGAGAACCAATGGTTACTGGCAGATAGGTTAAAAATTATCGTAGGAGATATTTTGTGGTAGGTAACTTATGTGGAAAAACCTAGGAACAGAACCAGCATGTTGAAGCTACATTGTTATATAGTAATTTGCATATAAAATAATAGGATGTGAGAAGAATGCTTAAATGTTAAGAAAGATGTGGAGTTTTGTTGTAGAAACAAAAGAAATACCAAAACTTTAAAGTTGATATAATTTAAACTCTTAGTTTTCTGGTTGATGTTTTTTTCTTCTTTAAGTTTTACTCAAGGCTTATTAGAAGGAATAGGACACAATATATTCACATCTTCTCACCTTTTTGGGAATAGAAGAAAATAAATCTTGAGCTTTCCTGCCTGTATTAGTTAGGAATTGTCCTTTGGAAAAAAGGGTATGGGAATTTTTCAAGGAAGAAAAAAAATTTTTTTTTTCAAGGAAGTTTGGTAAAAGAAAGGAAAATATTACAAGAAAGAATATGGTCTTCTATTCATTGCCTGGAAAGTGAGGAACCAAAATGGTCTAAGAAGACTGGAAAACTTTCTCGCTCTTTCTGTATAGGGTCCTGGGACATAAACATGGAGGCTACATTTAGGAGTATGAAGGGTTTCCAAACTAGGAGGCTAACAGAAACTCTGAAGCACAAGATGACCTCCTAAAAATGTAGGTTTTATTTTTGTTTTGAATTCTTCACTTTGCTGTTCCTCTCTTTTACTTTAAAAAAACAGGGGTGGGAGTGATGTTGTCACGTTCAGAGGTCTAAGCGTCACTGATCCATTGGGTGGATAGCCAACTGTGACAAAGAAGAATTTGTAGACTACATAGGCCTTGGTCTGGGGTGGAGTTTGCTCTGATCCTCCTGAAAGTTTTTAAAACCTGAAACTAGTCAGCTTTGACTACAGCATAAAAACACACTGCTAATTGTTTTTTAAGCCACAATGTTAAAGTATAACTTTTAGATTATTGTAACCCATAAAAGATAAGCATACATGTATTAGGCTTCTAAGTCTATTACTGAAAATTATGCAAATAATGGAACAAAATGACTGTTCTAAATAGTTTTTTTAGTTATAACTGTGAATTTGCCATGTGGCTATTACCATGTGGGTATCGGTATGGTGTAAATTATATTAATGTAATTAAACTTAAATCAATCATATTTATGTTTGCCTTTCATTTATATGTAGTATATAAATCATCTTTCTAAAATGTGTTGCCAAACTTTATTTGCCATCATTGATTTGGCAAAATATTCTTAAAATCCTTGTGATTTTCCACAAGTATAAATTAAGTACCTTATATATTCAAGTGTAAATGGAATCCTGCTTTCTATCAACCATTTGCTACAGACCCTTGTGTTAAGTGCTTCAAAGTTTTATGCATTTTTTTCTAGAGAAAAAAAGAGTTTTGGTGGAATCAGTTTTGAATTTCTATACTCTATGATGGAAACATTTCTCAAGTTCCATTTAAAAAATTACTTACTTTGAAGAATTGTTAGCATGTAATTTAAATAGAAATTATTTTTTCAAAGTTGAATTTTATTTTTTTAATGAATCTTGGCAGAGAATGAGTAGGCCTATGTTAACTTTTCAGTATCAAACAGGACATTTAGTTTCCTTTCAAAGAGTGGACAAGGATTAAATTTCATGGTAATATGATAGACAATAAGAAAATGCTTCAAGGTGGGGTGGGGGAAAGGATAGATAAAGTTTAGTATTGCACCCTTAAATACAAACACTTACTTGTATTTTCCTTTAGCACTTAAGTTGTTCATATACCTGCATCTGTGGAAAGTGACATAAAATCTTGGTTGGGTTACATTTTATTGTATTTACTAGATTCACTTCTCTGGATGAGTTCAACAGAAATAAAAACTCATGTATTTAGAAGCCAGACTGTGATGGTCTGCCTGTTGCTTTTGGCAACTGGAATGAGACCGCCTGACTCTCTGGCAGCTCCCTTTGGTTGTTAGATTGTTGAAACGGCCCGTTGATGGTCCTATTGAGCGTTCCAGGCTGTGAAATCATCATGTTGTTCCATCTCCAAGAATGACTCATCCTTCACTGGATTTCTGTATAGAATGTAACATCTTGCTGTGTCCCAAATTAAGTTCTGCCAAAGTGCTCTTGTGTACATTGGTTTTATAACTTCCTAAAGTACTAATTGGGTGTATAGCACTTCTGTAGTATGTTGATGTAATTGCTGCTTTGACCATTGTTTTGAAAGTATGAATTAGAATGACTGTAAGCATACTAAAATCATATAACAGTGTTTAAAACATTTAAATAAAGTACATGCAATAAACACTTTTAAAATCCAACTGTGTTTGTTTGGCATCCACACACTCCAATATATTATGTGGCCTTGTGAACACTGATATAAAGGAGTCAGTGAATGATTGGGAAATTTTTTAGCAGCCAAATTCTGCCTGTTTGCAAAATTAACATGAGACTCTTTGAAAATATTATATATACTTATTTATTCAAATCTTTTTGATTTGATTTAAAACAAGGTTTGTCTCTTGCATTTCCCTCATCCAAAAATATTTGTTGGTACATCAGAAGAAAATGGTCGTGAAGATTTCTACAGTATTTTGCCCGTGGTATATTTCACTGCAGCATCTCCATGTATGAGAAACAAATGTTCAGTGGAAATTCCACAAGTAAGCAAGTTTTAATGTCCTCACTGATTGAATAAAATGTCATGGTTGCAGTCTTTTGTCACAAGGATCTCCTCTAGAGTGTCCTCTGAAAGTAACTTGGTAAACACCATGGTAGCAGAGATCTATTTCATTTTGTTGAAACTCCTGACCAAGAACTTTTTATACTTTTAGCAATGAGGATAAAATGTTTGTTGAATCATTAATGTTTATTGAATAAGTGAATTCATTTCATTAA EMBV3_39434 CGTCATTGGTAAATGGTGACCTGTTAGAGGGCATTTCCACTAAGTTTGATTGTACCTGGG Gene BVV0102_378206 + 0 NULL GK000001.2:92744867-93132588 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42128 GTCTTTGTGATTTTGTGTATATTTTCCCCGTCCCACCTCACCCTGGTATGGGGTCATGGG Gene GeneID:531659|C1QTNF3:NM_001101138:45_cdna UTR3_Alt 2 NULL GeneID:531659 20 GENE C1QTNF3 NULL C1q and tumor necrosis factor related protein 3 EMBV3_32984 GGATTCACTTTGGTGTGGGTGTCATGCTAGGCTTTATTTTCGTGGTGGGTGGACATAATG Gene GeneID:525011|KLHL28:NM_001099030:256_cdna Constitutive 0 NULL GeneID:525011 21 GENE KLHL28 MGC166193 kelch-like 28 (Drosophila) EMBV3_26232 CCCGAGAACACGCTGGCGGCCATTCGGCAGATGAGACAAACAGATCAGAATGTAGTAACG Variant GeneID:539978|GDE1:NM_001034686:4_cdna 333^707 2 EMBV3_42453 GeneID:539978 25 GENE GDE1 MGC127215 MIR16 glycerophosphodiester phosphodiesterase 1 EMBV3_22755 TTCTTGGGAGGGGGCGGGTAAAAAAGTAGGGTGTTTTTGTCTGTGTTTTCAGGGGCTTGG Gene GeneID:516209|LFNG:NM_001046222:194_cdna Constitutive 0 NULL GeneID:516209 25 GENE LFNG MGC128664 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase EMBV3_38548 ACCCTTTCAGAACAGTGCATGGAATACAACATTATAAACCTCCCTGCAAGTCTGTGTGTG Gene GeneID:768057|HIGD1D:NM_001077114:244_cdna Constitutive 0 NULL GeneID:768057 22 GENE HIGD1D HIGD1A MGC140779 HIG1 domain family, member 1D EMBV3_08618 TCGTCCTCCTGCCTGGGGCGCTGAGCGCAGAGCCACCCTCCATGCGCCTGAAGGCCCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06228 GCTGCAGTCTTGTGTCAGCCTCAGCTTTCAGTTTCTTGCAGTATTTGATTTCGGTTGGCC Gene BVT0102_007330 + 0 NULL GK000022.2:50325619-50348515 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04476 CCGCCCCCGCCCATCTGCCCTAGAGTGCTCTGTGTATAAGGATGAATTAGAGTTGTCATT Gene GeneID:550622|ATP6V0C:NM_001017954:261_cdna Constitutive 1 NULL GeneID:550622 25 GENE ATP6V0C MGC127859 PLP ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c EMBV3_12058 TGATGTGAGCACTGTTAAAGAGCTGTGCAGGGCACTTGATGACATTAGCGAAAGCATCAA Variant GeneID:540139|REXO2:NM_001081735:119_cdna 593^646 2 EMBV3_25684 GeneID:540139 15 GENE REXO2 MGC148716 REX2, RNA exonuclease 2 homolog (S. cerevisiae) EMBV3_10533 ACTGGTTGTTCTCCCACGTCGGCGACCCCTTCCCGGGATATCCGATTTGCTAACCACGAG Variant GeneID:523809|UBASH3B:XM_002693034:290_cdna 242^741 1 EMBV3_20066 GeneID:523809 15 GENE UBASH3B NULL similar to Ubiquitin associated and SH3 domain-containing protein B (Suppressor of T-cell receptor signaling 1) (STS-1) (Cbl-interacting protein p70) EMBV3_25101 TATATAGCAAAGAGTTCAGCTTGGTGCTCTGTGATGACCTGGAGGGGCGGGATGTGAGCC Gene BVV0102_009639 + 0 NULL GK000001.2:8328351-8811791 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08539 TGTACAAGGGCTCTGACATGGAGGACTTCGGATTCAGTGTAGCAGATGGCTTGCTGGAGA Gene GeneID:525592|GRIP1:XM_002687647:822_cdna Constitutive 0 NULL GeneID:525592 5 GENE GRIP1 NULL glutamate receptor interacting protein 1 EMBV3_08576 TCCCGCCGCTGCCCCGAGAAAATGTTACTGTGAATAAGGTTCTTGAGTTCCCCTTGCTGA Gene GeneID:504855|IL17RC:NM_001075178:50_cdna Constitutive 0 NULL GeneID:504855 22 GENE IL17RC MGC142728 interleukin 17 receptor C EMBV3_27349 CAACAGTGGCACATCTTACAATTCCATTAGCTCGGTCGTGTCCCGGTGAGGGCAGCCTTT Gene BVV0102_156815 + 0 NULL GK000008.2:82301980-82365268 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226025 TCONS_00226024 TCONS_00226022 TCONS_00226021 1 XLOC_137907 Coding TCONS_00226025 XLOC_137907 Coding Coding DAPK1 8:82308267-82309886 = TSS169085 1619 1 TCONS_00226025_3 407 1 0 0.00221720915462207 0.00145526945248441 0.000717423308995976 0.000212762482445852 0.000671977288957392 8.75683947736711e-33 0.000218367584245665 0.000412824219313422 5.30331161175542e-05 0 1.41395145803481e-06 0 1.7722545780457e-06 0.000674927115501519 0.000566480268180837 0.0161028341798042 0.00557909515139979 0.00316356108668905 0.000186525130132587 0.000179757974720481 0.000449065574266013 1.31965309199433e-62 0.00197485894191977 0.00270645490108252 0.000408428150763561 0.00120211501319489 0.00108940001539926 0.000706854948065545 8.30272844129543e-05 0.000129974851137774 NM_001206038.1 DAPK1 Bos taurus death-associated protein kinase 1 (DAPK1), mRNA. 0.0 2906 99.94 0.996294008647313 XM_005251755.1 DAPK1 PREDICTED: Homo sapiens death-associated protein kinase 1 (DAPK1), 0.0 1932 86.46 0.992588017294626 TCONS_00226025_3 sp|P53355|DAPK1_HUMAN DAPK1_HUMAN Death-associated protein kinase 1; 0.0 822 95.33 0.997542997542998 1 coding 0 0 0 0 -0.041362696825172 0.815897645694533 0.024145859770927 0.615733249623165 TGGACAGATCAACATCATGCAGAGCGAGACCGTCCAGGACGTGCTGCTCCTGGATCCCCGCTGGCTGTGCACCAACGTTCTGGGGAAGCTGCTCTCTGTGGAGACCCCACGGGCCCTGCACCATTACCGCGGCCGCTACACCATGGAGGACGTCCAGCGCCTGGTGCCCGACAGTGACGTGGAGGAGCTGCTGCAGATCCTGGATGCCATGGACATCTGTGCACGGGACCTGAGCAGCGGGACCATGGTGGACATCCCCGCCCTGATCAAGACTGACAGCCTACACCGCTCCTGGACGGAGGAGGAGGACGAGGCGCGGGTCTACGGCGGCGTGCGAGTCGTCCCGGTGGAGCACCTCACCCCCTTCCCATGTGGCATCTTCCACAAGGTGCAGGTGAACCTGTGCCGGTGGATCCACCAGCAGAGCAACGAGGGGGATGCAGACATTCGCCTGTGGGTGAACGGCTGCAAGATCGCCAATCGCGGGGCCGAGCTGCTGGTGCTCCTGGTCAACCACGGCCAGGGTATTGAGGTCCAGGTGCGTGGACTGGAGACGGAGAAGATCAAGTGCTGCTTCCTGCTGGACTCCGTGTGCAGCACCATCGAGAACGTCATGGCCACCACGCTGCCCGGGCTGCTGACGGTGAAGCACTACCTGAGCCCCCAGCAGCTACGAGAGCACCACGAGCCCGTCATGATCTACCAGCCACGGGACTTCTTCCGGGCGCAGACTCTCAAGGAGACCTCACTGACCAACACCATGGGCGGGTACAAGGAGAGCTTTAGCAGTATCATGTGCTTCGGCTGTCACGACGTCTACTCGCAGGCCAGCCTCGGCATGGACATCCACGCGTCAGATCTGAACCTCCTGACCCGGAGGAAACTCAGTCGCCTGCTGGACCCGCCCGACCCCATGGGGAAGGACTGGTGCCTCCTTGCCATGAACTTGGGCCTCCCCGACCTTGTGGCCAAGTACAACACCAATAACGGGTCTCCCAAGGAGTTCCTCCCGAGCCCAGTCCACGCCCTGCTCCGGGAATGGACTTCCTACCCCGAGAGCACTGTCGGCATTCTCATGTCCAAACTGCGGGAGCTGGGGCGTCGGGACGCAGCGGACTTCCTGCTGAAGGCGTCCTCTGTGTTCAAAATCAACCTCGACGGCAACGGCCAGGAGGCCTACGCCTCAAGCTGCAACAGTGGCACATCTTACAATTCCATTAGCTCGGTCGTGTCCCGGTGAGGGCAGCCTTTGGCTTGGGCAGGGTCTCTTCCAACTGCAGGGGCAAGGGGGACACAGCCCATCTTTCCCACCAGAGATTCTGGCGCGTTCCTTCCTACGCCCACATCCTGAAGGACGCCCCCTCCCTCCCCGCCTCACCTATTTCTCTGCCACTACCTCCCTCCTCTCACACATTCCCTGATGTGTGAATGAATGGTCTTTCTAGTTCAAGAGCAGGCCCTATCCTTTAAACCTTTGGCCATTTGAAAAGCTAGCCACCCTCCACCTCTCATCCTCTAGTACCTTGCTTCTTAATGATAATTTTATTGGAATTCCTAACTTTTCAATGAAATTTTTTTAAACTGTTATATTAAATGTCCTTTAAAAAAAAAAAAGCGCA EMBV3_43342 AGGAGCTGCAGAAGGGGTGAACGTCTGGAGCCTGAAACCTGAGGATTTGTCAACCATCAT Gene GeneID:540143|GK2:XM_002688380:19_cdna Constitutive 0 NULL GeneID:540143 6 GENE GK2 NULL glycerol kinase 2 EMBV3_38200 GTTGTGAAGTAAACAACCCTGCCTCTTGCACAACATGGTACACCCTGTGGCATCTGAGGT Gene BVV0102_311984 + 0 NULL GK000030.2:114467763-115078601 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05378 GCAGTACATCACATGATTTTGACCCCACAGGTCTTGTTCAGCGTTGTGTGATCATCCAGA Variant GeneID:100337015|LOC100337015:XM_002693083:427_cdna 338^394 1 EMBV3_07639 GeneID:100337015 15 GENE LOC100337015 NULL Rho guanine nucleotide exchange factor (GEF) 12-like EMBV3_38735 GCCTCTATGAGCTGGGCAGACAGATATTCGAAGAGGGATCTACTGCAAGGGACTTTCTAG Gene BVV0101_077803 + 0 NULL GK000002.2:1406608-1772351 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107136 1 XLOC_063047 NonCoding TCONS_00107136 XLOC_063047 NonCoding NonCoding - 2:1702319-1703497 - TSS78757 1178 2 TCONS_00107136_1 51 1 0 0.000138597784678426 0 0 0 0 0 0 0 8.03749566978588e-05 0 0 0 0.000416508038840607 7.98640803165337e-06 8.32972122620173e-06 0 0 0 1.82621410032937e-05 0 0.000103081096264966 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0682014153893578 0.614036153418382 0.00794566082692032 0.889774059292599 TTGAGGGGAAGAAGGCAGATGAAGGTGGATGTGGAAACATTTCAGAAAGTTTCAGAAAATAATCTGGACAATTCTCTGAATTCATTTGTCTTAACTAAGAACCTGAATTGTGTAAGATACAGTGAAAAAAAAAAAGTTGGGACCCATAGACCAGAGGCAAGTGATATAAAATGAGAGATGTAAGCTTAAGCAAAAGAAGAGATGTGGTATAAGAAAGCCAAGATGTAACCTGGCCCAGCAAGAACCTGGGGATCAGGCAGTAGTGGGTGTCTGTGAGGGCACTTGCTGCTGCTCTCCTCCATGCCAGCTTCCTTCTCTGTCTGCTGTGGAAAGCAGTGTCTTCCCAGGAAGCCAGCACAATCATAATTGCCTCTATGAGCTGGGCAGACAGATATTCGAAGAGGGATCTACTGCAAGGGACTTTCTAGTCTCATTAAAAAGATGCTATTTATACACAGGAAGCCGTGAAGACACTGATTGCTAGAAAGCACAGCTCAGACAGGACTGCTAAGCCAGTTGAAGTGGAGAGGCTCCTTGAAAGCTGGTGAGATGGGCTCAGTGGGGTCTGGCTGCAGCGGTGTGGAGATGCAGCTGTTCTGTGCTCAGACATCAGAAGGGCTGGCCTGGACTATAGGACAAATCTCGGGACCACCCCCTGCAATAGAGCCAGACTAATTTGGGGCCCAGCACAACCAACTGTGAGATCTCCTTAGCCACACAGTCCCTTTCAGCAGTGCCTCTGCTTCAGGTTCAGGCTGCAGCCATGTCCCTAAGAAAACAGGATTGTAAAGGGAGACCCAGGTGAAATTGGGGGAAAATAATTGGCAAGAGGTGCTTAGTAAGTGTCTGCACCTGCTCTCTCTCCCAGAGCCTCTCCTGCTTTGGGCAGTTCAGTGGGAAGAGCACTTCCCTGCACAAGCACCAGGGAGAAGGAGCTTCTTTTAGCCTCGTGTCACCCATCTCACACAGCAAGCAGACTTTTCTGTACTTTCTGCATGTCTTCCTTCTGATGTATCTGCCATAGTTCCAGCAGTCCCATGACCTGTGACAAGGGTGCAGCTGCCCACATGTGGCCAGGCAGTAAAGGGCTGGGCCAGCCTGAGCACTGAATCTGCCTTGTGCTGGTACAGGCCCATGCCCAGGCCATCCCAGGCCAGCAGGGAGTCTGTGAGCTGCGC TCONS_00101471 . 3' 15019 TCONS_00101471 . 3' 16196 EMBV3_22642 CTCACCTGCGAGATCATGGAAGCGGGCTATGACATTGATGGTAACCTCCTACAGTATTCG Gene GeneID:782186|CD58:XM_002686125:174_cdna Constitutive 0 NULL GeneID:782186 3 GENE CD58 NULL CD58 molecule EMBV3_18741 CAAGAAGTCCTTTAAGCTACTAGTGGAGTGTTTCCAGTCCGTTAGGATGTGGACTCTGCG Gene BVV0102_100104 + 0 NULL GK000024.2:12325487-12694118 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17870 TCCTGGAAGGACACTGGATTCTCCATTAGACAAGCTGCAATATCATTCACATCATGCCTC Gene GeneID:508774|GDAP2:NM_001046013:38_cdna Constitutive 0 NULL GeneID:508774 3 GENE GDAP2 MGC137160 ganglioside induced differentiation associated protein 2 EMBV3_05539 GTCTACTTCCCGCCTATTTGCGGCCTATAGATTCGTGTGTCCCTTGAATACAAGAAAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11980 CTTGTCTATGGAGGGATCTTCCTGTACCCAGCAAACCAGAAAAGTCCGAAGGGCAAGCTC Gene GeneID:514066|FBP2:NM_001046164:12_cdna Constitutive 0 NULL GeneID:514066 8 GENE FBP2 MGC127579 fructose-1,6-bisphosphatase 2 EMBV3_25356 GGCAAATGACCCTAGATGGAAGAGATACAGGAGATGGATGAAGAATGAAGGCCCTGGACG Gene GeneID:535430|DNAJC25:XM_002689923:17_cdna Constitutive 0 NULL GeneID:535430 8 GENE DNAJC25 NULL DnaJ (Hsp40) homolog, subfamily C , member 25 EMBV3_12576 TCCCCTCGGGCGGCTATTCTTCCATCAGCAGGGCCCCCTCCTAGGGCGGGATGGCTCACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39699 TTACTGGCGTCACCTTCTGTGGGACGCTTTTTCCTTATTTTAGCCTTCGGGGTACTGGTG Gene GeneID:525599|LOC525599:NM_001081723:9_cdna Constitutive 0 NULL GeneID:525599 23 GENE LOC525599 MGC154977 butyrophilin family member EMBV3_18588 ATGGAACTTCAAAGCAGATGAACCACAGGCCACACTGAAAAATAAGAGTGAGCAGTCCTC Gene GeneID:504870|ACOT13:NM_001101845:50_cdna Constitutive 1 NULL GeneID:504870 23 GENE ACOT13 MGC152510 THEM2 acyl-CoA thioesterase 13 EMBV3_35081 GGAGAAGAACAAGGGGCCGTGAAAAAAATGGGCTGATTCAGATTTGGTACTCTGTGAAGG Gene BVT0102_121519 + 1 EMBV3_14104 GK000005.2:80789970-81582316 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11447 CAACTGGTATTACTGATCATATTGCCCAAGTCAAGGTAAACAAATATGGAGATACTTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05924 CAGAACCCAGTGCCATCCTGACCTCCATCCAGGTGTTGGAGAATTCGATGCCCATTACTT Gene GeneID:509704|LOC509704:XM_002699312:313_cdna Constitutive 0 NULL GeneID:509704 29 GENE LOC509704 NULL similar to C11orf9 EMBV3_37744 CCAGAAGGCGAGCTGTGCTGCCCACTGGATGGAACCAAGACCCACGAGGAGGGGAGGACC Variant GeneID:505043|CD320:NM_001166558:24_cdna 456^530 1 EMBV3_18359 GeneID:505043 7 GENE CD320 TCblR CD320 molecule EMBV3_16724 TTTGACCCCCACGTTTATTTAAGGCTCCAGTAATCTCAAGGCTCATAGGACCAAGAGGCC Gene BVV0102_067095 + 0 NULL GK000025.2:7796918-7931236 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13158 TCCTCGAGAAACTGATGAGTTCTGCAAGATTGACTGATCTGTCAGCCTCTCGGTTGTCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41760 ACCCCAAACTTCAAAGGCTTCCAGGCAGCGGTACGTCTCCTGTGTGCTTGGATGTCCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00756 TGATCAACCTGTTTCACAAATACTCGGGATCCGATGACACCATCGAGAAGGAGGACCTGC Gene GeneID:282344|S100A7:NM_174596:34_cdna Constitutive 0 NULL GeneID:282344 3 GENE S100A7 NULL S100 calcium binding protein A7 EMBV3_11231 AAAGCGTCGGCCAGAGATGAGCCGAGGCTTGGGACCAGTGTGTGCCAGGCAGCTGCAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41545 ACGATGCAAAGACAGAGCAACTTCGTATAGGACCGTATTCCTGGACGCCATTTCCCCATG Gene GeneID:505869|NTAN1:XM_002698033:244_cdna Constitutive 2 NULL GeneID:505869 25 GENE NTAN1 NULL N-terminal asparagine amidase EMBV3_30029 CATGTTTGTCCTCCCGTGACTGAGCAACTTCCCGGTTGCTGTAACTTACCTGTAAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05529 AGTAGATACTTCCTGCCTTTACGTACCAGTGCCTCGGCCGTTCGGTCCATAAACATCCAG Gene GeneID:282049|NMT2:NM_174456:58_cdna Constitutive 0 NULL GeneID:282049 13 GENE NMT2 MGC134515 N-myristoyltransferase 2 EMBV3_05818 GTAATCACAAATTAGCACAATATTCACAATTGCACTTGGCAGCTGAGGAACATTTCACAC Gene BVT0101_007890 + 0 NULL GK000008.2:42830160-43192163 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227470 TCONS_00227468 TCONS_00227469 1 XLOC_138249 NonCoding TCONS_00227468 XLOC_138249 NonCoding NonCoding - 8:43181594-43188638 - TSS169804 1446 2 TCONS_00227468_2 96 0.787690179806362 4 0.795257702683516 0.000481471669428269 0.000148387886701316 0.000106193255070791 0.000238095206842813 0.000449734027031784 4.70203831058764e-05 0.000427030999870648 0.000645974186213266 1.3099673567277e-09 5.45867533936928e-11 3.52383948538098e-05 0 3.06236715946001e-06 1.19955125704823e-12 9.77233862476121e-05 0 0 0 0.000120329621097038 3.00162228301713e-08 1.7209650726191e-14 0 3.28948686469855e-47 0 0.000204987209162072 2.1356926408285e-14 0.000165186497974884 5.94458530412513e-06 0 0 NM_001077016.1 DPH6 Bos taurus ATP binding domain 4 (DPH6), mRNA. 8e-17 93.3 67.82 0.195712309820194 NM_198844.2 ZPBP2 Homo sapiens zona pellucida binding protein 2 (ZPBP2), transcript 3e-72 277 71.58 0.378976486860304 0 noncoding 0 0 0 0 AGACAAGGTCCCCTATTGCAGTGCACACTGTTCCCGGTTCTGGCTTTCTTAACACAGAGACAAAATGATCCTGCCTGGAAACAACGCAAGTGTTGTGATACACAGAGCTGTGGGGTGATGGAAATCAAACTAACAGTGGTTTAAGCCTTGATGAAACTGAGCTATGATGAAACATGGCACGAGGTGGTTTGGGAAGGGCTGCACAGGGGAAGATGGAGCACAGCAACAGTGGGCTGAAGATCTTGAGGAGCCTCACACCACCGAAGGCCCCACATGTCACAGAGACACAAAAATCATCTATTATAAAATACCCAGACAGCTCTGTCACTCAGGATCTGTGGCTCAGGACTCACACAGCACACGCTACTGTCCCAAACGTTGGCACTTGTGACCCACACTTCTTTGTCCCTGGGGAAGTGCTTTTCTACATTTCTTTCCCTGCATCCCAAAATCAAAAAGACTGACATTTGGTGGGTTGTGATGCTGTGGCTACACAGAAATCACTTCAAAACATGGCAATGATTTGAGTGGCAAAAGCTTTTAGGAAAGAGAGAGGACGAATTAATTAACTTGTCAAATCCTTCCTCTCAGATTCTTGAATAAAGAAGAGTCGTTTCCTAAGAATTCCTCATGTCCGTTTCCTAGTTTGCAGTGCATAGCTTCGTAAGTAATCACAAATTAGCACAATATTCACAATTGCACTTGGCAGCTGAGGAACATTTCACACCATTAAGTAATTTATGTTCCTCTTTATCAAATGTAAGAAGCTTTTTAAATGAGTAGACTTTATTTCTTAAGGCAGTTTTAGATTTACTAAATTATTAGATTTAGGGCAATTTATTTAGATTTAGAAAAATCGAGCAGATCACACAGAGAATTCCATATAAGCTTCTCTCCCTTACACAATTTCCCGTATTAGTAACATCTTGTCTTAATGTCTTAATGTGGTTTATTTGTTACAATTAACAAACCAGTGTTGATCTATTATTAGCTAGAGTCCATAATTTACATACAATTTCACTTTGTGTGTTGTCTAGATCTATGAGTTTGAAAAATGCATAATGTCATGTATTCATCATTACAGTATCAGAATAGTCTCACTGTGCTAACAATCTTCGGCGCTTCACCTATTTATCCCTCCAGCTATCCTCAAAACTCAGGCAACCACTGATCTTTTTATTGTCTCCACAGTATTAATATTAAACCTTTTCCATAGTGTTATGTGGTTGGAATCACACAGTATGTAGCCTTTCTAGACTGAGTTCTTTTACTTAGCAATGTGCATTTAACTCTCCTTCATACCTTTTTTGGATTGATAGCTCATTTTAAAAATTGCTGAATAATACTCTGTTGTACAGATATTCTAGAATTTATCCATTTGCCTACTGAAGGTTATCTTGGTTCCTTCCAGTTTAGGGTACTTATGAATAAAACTGCTATAAACAT TCONS_00227450 s 5' 349312 TCONS_00227450 s 5' 350513 EMBV3_32947 TCCAATCACCATAAAGACTCTGCAGTACACCATCTCCGCTTATCTTCCAGTGACGCTGAA Gene GeneID:504677|PGAP1:XM_002685473:170_cdna Constitutive 0 NULL GeneID:504677 2 GENE PGAP1 NULL post-GPI attachment to proteins 1 EMBV3_08956 CAGCGATATGTCTGGGAGCAGAGGTAGTAAGGCGGCTTTTGTAGGCTTACGAGTTTATCC Gene GeneID:514842|LOC514842:XR_084697:144_cdna Constitutive 0 NULL GeneID:514842 6 PSEUDO LOC514842 NULL similar to Replication factor C subunit 1 (Replication factor C large subunit) (RF-C 140 kDa subunit) (Activator 1 140 kDa subunit) (Activator 1 large subunit) (A1 140 kDa subunit) (DNA-binding protein PO-GA) EMBV3_07786 TGAGCATAGCCTAGTGATTGATACTCTGAAGGAGGTCGATGAAACCCGCAAGTGCTACCG Gene GeneID:404138|PFDN2:NM_001080221:215_cdna Constitutive 1 NULL GeneID:404138 3 GENE PFDN2 NULL prefoldin subunit 2 EMBV3_34711 CCGGAGCCTGAGCCCGAGCTGGAGCAGAAGACCCAGCCTGTGGTAGAGAGCCTGGGGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25033 AGGTTGAGTGGAGCCAGTTAGGTGGGTAGGGAGAGGGGAAGTACTGACCAGAGCTGCCTT Gene BVT0101_023846 + 0 NULL GK000005.2:73946204-73980775 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09016 TTTGCTTCCCATGATTCTACTGTCGGTGATCTATGCCCAGTCAGGAGCCTGCCTATATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16187 TGATTCCCCTGGCCAAGGAGCTGATGGCGCAGAAGCCCAGCGCGAAGCTGGTGCGAATGT Gene GeneID:507436|G0S2:XM_002694267:265_cdna Constitutive 0 NULL GeneID:507436 16 GENE G0S2 NULL G0/G1switch 2 EMBV3_28997 GAATTGGTCTGCAAAAAATCCAAATACATTAGAGGTAACAAACTGTGCCTCAGCAGGTCT Gene BVT0102_247261 - 1 EMBV3_14410 GK000010.2:10609980-10613893 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012539 TCONS_00012542 TCONS_00012537 TCONS_00012535 TCONS_00012536 TCONS_00012543 TCONS_00012538 TCONS_00012541 1 XLOC_007886 Coding TCONS_00012539 XLOC_007886 Coding Coding PAPD4 10:10549960-10611294 j TSS9506 3088 1 TCONS_00012539_1 355 15 0.949896466828624 0.000648429234861103 0.000394750208279058 0.000957343603384845 0.000267647423452137 0.000577983875203793 1.29700154518626e-07 0.00102096101186755 0.0011308171163679 0.00166205206012278 0.000136636071681261 6.87000651997423e-17 4.42444181597192e-06 0.000632545020732518 0.000226843699173821 3.26478555922799e-05 0.00256353596502448 0.00291142538673509 0.0042103624558537 0.000904104296118591 2.06631125856071e-12 4.81369473915616e-17 0.000517442314637011 0.00233835253238042 0.00242748936511724 2.22625266510439e-06 0.00104199580682976 0.00044487848922358 8.91856081448919e-05 0.000567404558778379 0.000136672601844607 XM_005211340.1 PAPD4 PREDICTED: Bos taurus PAP associated domain containing 4 (PAPD4), 0.0 2893 100.00 0.51910621761658 NM_173797.3 PAPD4 Homo sapiens PAP associated domain containing 4 (PAPD4), transcript 0.0 1903 88.25 0.480246113989637 TCONS_00012539_1 sp|Q2HJ44|GLD2_BOVIN GLD2_BOVIN Poly(A) RNA polymerase GLD2; 0.0 716 98.88 0.991549295774648 0 noncoding 1 1 0 0 1.04114594478133 0.0100998661951046 -0.0222068393874481 0.731917765181453 TCACGTCGGTCTTCCGGGTATTTCCGATAGGGCTTTCTACGCCTCTTTTTTTCGGTTTCTTTTTAGTCTTCCGTCTCTTGCCACCGCCCCTGAGCTCCCACACCCTTGCCGGCCCTGCCTTTTCTTGTGTCGCTCCTCCCTGCTGCCGAGGCCGAGACTTGGCGCTCAGCCCGAAGCCAGGCCTATCCATTCCGCGTGGGCACTACCTCCTTTGGCTCGGGAGGAAGCTAGGACCAAGCGCGCCAGGCCGTCGCTCCTGGAGCTCCTGGGCTGGGGGTGCCGGTCGACCCTCCTGCGCAGTCCTTTCCCGAGGACACTTTCTAGGACCAAACGAGGAAGAGCGTCTCGAGACTCTGCATGGGGTTTCAAAGGGTGGTGAAGAGCTAAGGTAGAAGAATACATGTTGTCTTTTAGTGAACAAGAGCATGTTCCCAAACTCAATTTTGGGTCGCCCGCCTTTCACTCCAAACCATCAACAACATAATAACTTCTTTGCCCTGTCACCAAGTCTTTACTCACACCAGCAGCTTATAGATGCACAGTTCAGCTTTCACAATGCAGACTTGTCTAGAGCTGTGTCATTACAACAGTTGACGTATGGAAATGTCAGTCCAATACAGACCTCAACTTCCCCATTATTTCGAGGAAGGAAGAGATTAAGCGATGAAAAGAATCTTCCTCTTGATGGTAAACGGCAGCGTTTTCATTCACCCCACCAAGAGCCAACTATAGTTAACCACATAGTGCCTTTATCAGATGAAAGAAGATACTCAATGTCACCATTGTTTCATACACACTATGTACCAGATATAGTCAGATGTGTTCCACCTTTTCGAGAAATATCAATTTTAGAACCTAGAGAAATCACACTGCCTGAGGCCAAAGATAAGTTGAGTCAGCAGATACTGGAGTTATTTGAAGCATGTCAGCAGCAAGTAAGTGATTTAAAGAAGAAAGAACTCTGTCGAACAGAGCTGCAGAGAGAAATTCAACTGTTATTTCCACAAAGCAGACTTTTTTTAGTTGGGTCTTCTTTAAATGGATTTGGTACTCGGAGCAGTGATGGTGACTTATGTCTAGTTGTTAAAGAGGAACCAGTAAATCAGAAGACTGAAGCACGGCATATACTCACCTTAGTCCACAAACACTTCTGTACTAGACTTTCTGGTTACATTGAGAGACCTCAGTTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGTTGTGTGGAGTTCGACTTGAATGTAAACAATATTGTTGGAATAAGAAACACATTCCTTCTCAGAACTTATGCATACCTTGAAAATCGAGTTCGTCCGTTAGTACTGGTGATTAAGAAGTGGGCCAGTCACCATGATATAAATGACGCCAGTCGCGGTACTTTGAGCAGCTATAGTCTTGTACTGATGGTTTTGCACTATTTACAAACCTTACCTGAACCCATCCTTCCATCCATCCAAAAAATTTACCCACTGGAATAGTCAGATGATTTCAGTTCGTGAAGCCAAAGCCATTCCCAGGCCTGATGGTATTGAATGGAGAAATAAATACATCTGTGTAGAAGAACCTTTTGATGGAACAAATACAGCAAGAGCTGTGCATGAAAAGCAGAAGTTTGATATGATCAAGGATCAGTTTTTAAAGTCATGGCACAGATTGAAAAACAGAAAAGATTTGAACAGTATACTACCTTTAAGAGCTGCTATCCTGAAAAGATAACTGGCCTCTATTTCTTAATAAAGAGCAGTAGTAACATCATAATACGTTTTGTCTACCTTCATCGTGGTTTCTTTTTAATTGTTCTTGTTTTCATGTTTTATTCTTAAGACATACTTATATAAAGAGTGCATATTTTATTATGATGTTTCCTAATAAAACCCTTTGATTTAAAGATGTATTTTTGAAAATGTTTACATTGATGGTTAGTAATATTATGGCATGAATTTTCAGGAGATCAGATAAAATATTTTTGGGGGAATTATCGAACAAATAAAAGGTTTTTGCTATAACTTTAATTAATTGTACCACATGCTAACACTGAAGAGACATGTGGACTTTTTTGGAAAGGGTCTGATTCCTACATCCTTAAAGTAGGACCTTCAATAGATGGTTTGTTGCCTACGTCTCTTCTAGTGAAGTGAAGGTTTGAGTCAGTTATTCAGTTACTTGAAGCAAAATGACATCTTTGATTTCATTGAAAGAACTACAGAGGCAGGAGATAGTGGACAGTTGCCCTAAGCCCTCACTTGACTGATCAGGAAAGACTGAGGCTCTGGCTGTGTACAGAATAGTGTTTCATCAGTACCTCACATGCCTTAGGTGGACTCAAGATTGCTTTAAAGTTTGTGTTGAACAACAGTACATTTTGCACTAGTAATATGAGCACTAACTCTGTATTATACAGCAGTTAGGGAATTGTTTTGAAGAATTGGTTCAGTGTAGACATTTCGAAAAGATGAAGTTCTCTGTGCTTTATGATAGCTTAGTGCAATATGCCCGTTTGCTTTACTTCCCATTTTCCTGCTTTTATTTTTCCTGTGATATGAAGCAACAGAAACTGAAAGATCAAAATTGAGATTATATCCTATTGATAGATTCAGAGTTTTATCTGTGTATAATTATAGGATTGTAATCTAAACTGGAAGTTGTCAGTAGTAAGCCACTATAAAATGTTCTAGATAAGACATAAAATTACTATAAATAAAAGCATAGCATTTGTAAAGGTTTCTTTTTTAGTATTTCTTTTCCACAAGAAGAAATAGTGGTGGCTGCTAAAAAAGCTACAGTGTTTATTAAGGTTGTTTTTGGTGTAAATATTTGTAAATTGGTCAGTGCCTGTAAATTTAAATATAAATAATCTTAAAAAACAGTTCTAACTTTTTCTAAAGGACTGTGTACAACTTTTTTTAAGACCTGCTGAGGCACAGTTTGTTACCTCTAATGTATTTGGATTTTTTGCAGACCAATTCAAATGCTAAGACTTGCTTTTTGACTTGTAAAAGGTGCATATTTTCATTTTTTTCTTTAAGTTTAAAATTTTGTATGATCAAATGGAATAAAGTTTATATATGAAAAT EMBV3_24651 GCACACTTGCTTCAGAGCCTCCCCATCATGGTTTCATAGGGAAGGGGATGCTGACGGGGG Variant GeneID:512373|DAK:NM_001024524:76_cdna 392^581 2 EMBV3_40803 GeneID:512373 29 GENE DAK DKFZp586B1621 dihydroxyacetone kinase 2 homolog (S. cerevisiae) EMBV3_02882 ACAGCTTATCATGGAGGCGAAAGAGTCTAGAGTTTAGGGAAACTCGGGCTGCCCAGGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02155 ATGTGTGACCGAAAGGCCGTAATCAAGAATGCCGATATGACGGAGGAGATGCAACAGGAC Gene GeneID:783688|LOC783688:XM_002699795:22_cdna Constitutive 0 NULL GeneID:783688 X GENE LOC783688 NULL similar to dynein light chain 1 EMBV3_28479 CCCAACCCCACCCCCCAGTCCACAGTGTCTGAGCCTGGGTGTCTTTTGTAGATTTTTAAA Gene GeneID:540803|MRAS:NM_001098118:69_cdna Constitutive 2 NULL GeneID:540803 1 GENE MRAS NULL muscle RAS oncogene homolog EMBV3_20866 CTTTTTCCTCCAGCTCAGATAGCACAGACCTTAGGCATTCCACCCACTCAGCTCTCCAAG Gene GeneID:768007|COG8:NM_001077067:468_cdna Constitutive 0 NULL GeneID:768007 18 GENE COG8 MGC134614 component of oligomeric golgi complex 8 EMBV3_21593 GAAAAGGAAGATGAATCCCTGCCAATAGATGACATTTGACACACTAAGGAATCACCCATC Variant GeneID:617557|MMGT1:NM_001079630:33_cdna 535^638 2 EMBV3_39259 GeneID:617557 X GENE MMGT1 TMEM32 membrane magnesium transporter 1 EMBV3_02951 AGCCCAGACAGCCCAGAGCTCAACAAAGTGATTTCATGAACGTCTACTACCAGATCCGCT Variant GeneID:505568|EXOC7:NM_001034250:350_cdna 480^702 1 EMBV3_37964 GeneID:505568 19 GENE EXOC7 MGC128131 exocyst complex component 7 EMBV3_42783 CGCCTCAAAATTTCCAAGAAGCCAAAAGACCCAGATCCACCAGAAAAAGACTTCACTCCC Gene GeneID:535340|EXOSC10:NM_001102186:85_cdna Constitutive 0 NULL GeneID:535340 16 GENE EXOSC10 MGC166383 exosome component 10 EMBV3_33681 CAGCTGCCGATTTCCAGAAGAAGAGGAAGGAGAGTGTGAACTGTGAAGATGTGTTGGGAC Gene GeneID:520341|TNFRSF9:NM_001035336:73_cdna Constitutive 0 NULL GeneID:520341 16 GENE TNFRSF9 MGC128290 tumor necrosis factor receptor superfamily, member 9 EMBV3_23762 AAGGGGCGAGATGTAAAGGAGGAGACCTCAAATTCTTGATTGGATGGGTCGATGGGTCTC Gene GeneID:527574|SALL2:NM_001102112:70_cdna UTR3_Alt 2 NULL GeneID:527574 10 GENE SALL2 MGC166009 sal-like 2 (Drosophila) EMBV3_23679 CTAGTGGAAAATTGGTATTAGGACCACTTCAAGAAAAGGGAAAGCAGCATGTAGGCCTAG Gene GeneID:450214|CENPC1:NM_001045881:23_cdna Constitutive 0 NULL GeneID:450214 6 GENE CENPC1 MGC128569 centromere protein C 1 EMBV3_36678 CTTTCAGACAGCCTTCAGACCCCCCAGCAAAACCCCCACAGATTTATTACAGAGTTCAAC Gene GeneID:540891|CNOT4:NM_001035432:29_cdna Constitutive 0 NULL GeneID:540891 4 GENE CNOT4 MGC142989 CCR4-NOT transcription complex, subunit 4 EMBV3_10571 CATTCAGGAGACGATCCTTGACCTCCGTACTCCTAATAAGAAGCTGCTGCTAACCCTTCC Gene GeneID:509340|CXHXORF41:NM_001046029:22_cdna Constitutive 0 NULL GeneID:509340 X GENE CXHXORF41 MGC137156 chromosome X open reading frame 41 ortholog EMBV3_12088 GAGCTGTGGCCAAGGCCCTAAGCACTTGTAGCTCCCACTTCATCCTTATCCTCTTCTTCA Gene GeneID:509567|LOC509567:XM_002693159:90_cdna Constitutive 0 NULL GeneID:509567 15 GENE LOC509567 NULL similar to olfactory receptor Olr190 EMBV3_30734 GCCTCTGTTGTAGTTACAAATGGCAGCTGGTAAGTGGCAGTCTAATCCCACAATTAGGGG Gene GeneID:513445|TMEM98:NM_001046146:247_cdna Constitutive 0 NULL GeneID:513445 19 GENE TMEM98 MGC138006 transmembrane protein 98 EMBV3_26790 GCTTTTACTCTGTTGTGGGGGGAAAGACTGCATCGTGGCCCCAGACTTTTAATACAGCAC Gene GeneID:530618|SPOP:NM_001075936:123_cdna Constitutive 3 NULL GeneID:530618 19 GENE SPOP MGC139890 speckle-type POZ protein EMBV3_08501 CTATTGAAGAGTCAGCAGCAGAGGAGGAGACTGCAGCAAACCTTGAACATGATGAATGTG Gene GeneID:505533|TAF1D:NM_001037586:1_cdna Constitutive 0 NULL GeneID:505533 29 GENE TAF1D JOSD3 MGC134293 TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa EMBV3_42221 CCTGACTCCAGGGAACTCCTGACTCCGGGGAACATTAATTGACAGGAGCTTATCAAACGC Gene BVV0102_047022 + 0 NULL GK000030.2:65449920-66099847 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00253025 TCONS_00152753 TCONS_00063037 TCONS_00230737 TCONS_00007432 TCONS_00030297 TCONS_00232348 TCONS_00186108 TCONS_00248863 TCONS_00124583 TCONS_00109859 TCONS_00209829 TCONS_00023615 TCONS_00252354 TCONS_00009883 TCONS_00010052 TCONS_00009945 TCONS_00251930 TCONS_00218899 TCONS_00175545 TCONS_00040583 TCONS_00208127 TCONS_00073576 TCONS_00040195 TCONS_00218856 TCONS_00244654 TCONS_00123618 TCONS_00234064 TCONS_00207068 TCONS_00066192 TCONS_00177280 TCONS_00020651 TCONS_00072815 TCONS_00189806 TCONS_00206861 TCONS_00062743 TCONS_00231613 TCONS_00030202 TCONS_00245928 TCONS_00080765 TCONS_00153219 TCONS_00185807 TCONS_00070957 TCONS_00252056 TCONS_00244651 TCONS_00229410 TCONS_00088087 TCONS_00124845 TCONS_00176254 TCONS_00141421 TCONS_00056728 TCONS_00037933 TCONS_00157440 TCONS_00006827 TCONS_00022065 TCONS_00006026 TCONS_00136896 TCONS_00064461 TCONS_00219970 TCONS_00197184 TCONS_00056819 TCONS_00238326 TCONS_00038667 TCONS_00066285 TCONS_00156732 TCONS_00040178 TCONS_00055388 TCONS_00040745 TCONS_00201770 TCONS_00222115 TCONS_00244653 TCONS_00233344 TCONS_00056147 TCONS_00239418 TCONS_00116101 TCONS_00178694 TCONS_00071861 TCONS_00250938 TCONS_00251546 TCONS_00123170 TCONS_00010780 TCONS_00176255 TCONS_00223365 TCONS_00124110 TCONS_00249570 TCONS_00209529 85 XLOC_006139 XLOC_131641 XLOC_155966 XLOC_092518 XLOC_037764 XLOC_140227 XLOC_002993 XLOC_016551 XLOC_141833 XLOC_112161 XLOC_151806 XLOC_076127 XLOC_065763 XLOC_128340 XLOC_014282 XLOC_155295 XLOC_005436 XLOC_005604 XLOC_005497 XLOC_154871 XLOC_132218 XLOC_105326 XLOC_024399 XLOC_126640 XLOC_045340 XLOC_024012 XLOC_132175 XLOC_150512 XLOC_075170 XLOC_143543 XLOC_125587 XLOC_040909 XLOC_107054 XLOC_011326 XLOC_044583 XLOC_115843 XLOC_125381 XLOC_037470 XLOC_141101 XLOC_016457 XLOC_150855 XLOC_049649 XLOC_092984 XLOC_111860 XLOC_042734 XLOC_154997 XLOC_138905 XLOC_052874 XLOC_076388 XLOC_106033 XLOC_085849 XLOC_034531 XLOC_021762 XLOC_095895 XLOC_002389 XLOC_012736 XLOC_001589 XLOC_083107 XLOC_039185 XLOC_133287 XLOC_118846 XLOC_034622 XLOC_144993 XLOC_022490 XLOC_040999 XLOC_095192 XLOC_023995 XLOC_033196 XLOC_024559 XLOC_123415 XLOC_135424 XLOC_142826 XLOC_033950 XLOC_146084 XLOC_070270 XLOC_108467 XLOC_043631 XLOC_153881 XLOC_154487 XLOC_074724 XLOC_006331 XLOC_136665 XLOC_075662 XLOC_152513 XLOC_128040 Coding TCONS_00223365 XLOC_136665 NonCoding NonCoding - 7:99197616-99198194 - TSS167363 578 1 TCONS_00223365_1 46 0.998269896193772 1 0 0.000120648814424882 6.20409940898881e-05 5.51405551987913e-05 7.67844353482926e-05 2.53681650352793e-05 0.000349004910194905 6.67386467464298e-05 9.48956839952509e-05 0.000136259884344415 0.000309839721293351 0.000106745086248943 9.34329214631254e-05 5.07325207223975e-05 7.83485220371222e-05 0.000264162962598948 0.00439530801700214 0.00120968757694069 0.0042704637380745 3.04795312933588e-05 4.11579086485804e-05 7.71600047162288e-06 0.00131452670583257 0.00344702967144713 0.00588780578812554 6.32849547407575e-05 8.55096297502652e-05 7.47435494178299e-05 0.000452121394965465 0.000429115516678603 0.00059472107130323 XM_001250798.4 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant 2, mRNA. 2e-13 80.6 94.23 0.0882352941176471 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 ACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATGGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATTGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATGGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAG TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 EMBV3_32417 ATCCTGAGACTCTGCTTCCGCCGCCAAAATGTGGTGGACATCATGAGAGTCAATGTGGAT Variant GeneID:505379|VAMP3:NM_001045915:31_cdna 91^172 2 EMBV3_41113 GeneID:505379 16 GENE VAMP3 MGC128311 vesicle-associated membrane protein 3 (cellubrevin) EMBV3_20307 CAAGGTGGTCGTACTCCGGCTCTTCTGTAGCCTAGCTTGCAGCTGCTGGATCTCGTTCCT Gene BVV0102_000596 + 0 NULL GK000030.2:143430607-143498808 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25680 CAGAGTGTCGGGGGACTTCGAAGCCTGGGTAGGAAGATATTACGTGCTTGGAAGAAGTAT Gene GeneID:282167|CATHL5:NM_174510:55_cdna Constitutive 0 NULL GeneID:282167 22 GENE CATHL5 NULL cathelicidin 5 EMBV3_07254 CTGGCAGAGAAACACTAATTGACAGTGCTCTTTTCTTCCTGTTTCAAGTCTTTTCTTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03626 CCCCATATTCCCATTCTCCCTTCCCCACAGCCTCTGGTAATCACCATTATACTTTCTGTG Gene BVT0101_015062 - 1 EMBV3_29980 GK000029.2:17925749-17956883 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38257 TCTCCGGTCAAGCCGAAACGCTCCCGTGGTGCTCCTGGCGGCGGAGATGGCGGGGAATAC Variant GeneID:541044|RBM15:XM_002686184:387_cdna 181^477 1 EMBV3_18492 GeneID:541044 3 GENE RBM15 NULL RNA binding motif protein 15 EMBV3_14699 CTCTCTCCGAGAACTGACGGTGCCACCACCGGCGCCTCGAGGGCCGGGCAGAACCGCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12005 GCTCCAGGCCAAGATGTATGCACCTTAATGATGTGGAACTGAATTTAGAGTCAATGCTTC Gene GeneID:618192|HSD17B13:NM_001046616:37_cdna Constitutive 2 NULL GeneID:618192 6 GENE HSD17B13 MGC137280 hydroxysteroid (17-beta) dehydrogenase 13 EMBV3_15808 CTTCTCAAAGACTTGGACTGCTTCAAATAATTGAAGGAAAGCAAATTACACTTCCAGAAA Gene GeneID:782907|LOC782907:XM_002689506:107_cdna Constitutive 0 NULL GeneID:782907 8 GENE LOC782907 NULL similar to PRDX3 protein EMBV3_32705 GCCTCCAGTCCTCCCAGTCTGTTGCATGGACCCCTTTCATAGCTTCCACTGAAGAAGATT Gene BVT0102_379229 - 1 EMBV3_23594 GK000011.2:60598441-60654633 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032034 1 XLOC_018279 NonCoding TCONS_00032034 XLOC_018279 NonCoding NonCoding - 11:60613063-60613539 - TSS23033 476 0.17436974789916 1 0 0 2.11100844969706e-05 0 0 0 0 0 0 0 8.64385661019022e-06 0 0 0 0 0 0.000388406022334196 0.00195320908487749 0 0 0 0 0 0.000173458881109881 0 0 0 0 6.05368244812427e-05 5.09937705905976e-05 0 0 noncoding 0 0 0 0 0.0228415984193435 0.845644290532173 0.0236410209788055 0.757409332097771 GATTTAAAATTTACTTCCTATAAACCAGAAATTAAGTCTAGAACCTTTACTGGCTCAGATTAAAATTTTGTCTAGAATACGAACATTCTTTTGAACCTAAATTCCTACAGAGATTTCATTCTAACAACTAACTAGTTAGCTGTTTGTTTCCCCACCTTTCTTCTGTGTATCTCCACTGACTTGTCACCCTAAACTCAGACATCACTCTCTTAGGGATGCTGCCTCCAGTCCTCCCAGTCTGTTGCATGGACCCCTTTCATAGCTTCCACTGAAGAAGATTGTAATTGCCTGTGAGTGTACCTAGGTGTCCTACCAATCAATGAACTTCTTATAGCCCACTACCCTGTCTTCCCCAGTCCCTACTTGACTTTCACCTCCTTGATACCTGCCCATCCTTCAGTCCTCAGATCAAATGGTATACCCGCTATGGAAGATTTCCCCATTATACAGAGCTATAATTTTCTGTGTTTTTTCTC TCONS_00025067 TCONS_00025070 TCONS_00025071 . 3' 14619 TCONS_00025067 TCONS_00025070 TCONS_00025071 . 3' 15094 EMBV3_20219 TCAGTGGGACAGAGGGGTTGCGGCGTCTGGGCAGTGGACAGCGCGCTGCAGGGGACTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04970 ATCTGGGTCTTCAGACTGAAAAGAAGAAAGCGCATTGCACGACGACTGGTAGACACGCTC Gene GeneID:538949|ESCO2:NM_001101182:61_cdna UTR3_Alt 3 NULL GeneID:538949 8 GENE ESCO2 NULL establishment of cohesion 1 homolog 2 (S. cerevisiae) EMBV3_29072 CTGGGCAGTGACGACCAGAGCTGGGGCTGGAATCTAGTGGACAATAACCTACTACATAAT Gene GeneID:533064|FBXO45:XM_002684803:173_cdna Constitutive 0 NULL GeneID:533064 1 GENE FBXO45 NULL F-box protein 45 EMBV3_19886 CTGAATCACCAGAACGAGACCATCCAAAATAATTACCGCAGCACTCAGCCCCTGAACCAC Gene GeneID:280742|CA6:NM_173898:4_cdna Constitutive 0 NULL GeneID:280742 16 GENE CA6 NULL carbonic anhydrase VI EMBV3_14464 CAGAGTACAGTAAGTACAGTGACCAGCCACACATAAGAGGTAGAGTTCTTAATCACAGTT Gene BVT0102_296095 - 0 NULL GK000003.2:50467161-50490448 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169811 1 XLOC_103448 Coding TCONS_00169811 XLOC_103448 Coding Coding TMED5 3:50448480-50468871 = TSS127045 3690 1 TCONS_00169811_1 226 4 0.81922511034821 2.18820326027171e-05 2.45084359082752e-05 8.94513049051756e-06 1.12759513395927e-15 2.27458123646819e-05 7.36058367120774e-06 5.6018859731112e-06 6.2951214279388e-05 9.62195487186448e-05 0.000388151719744485 0.00028949394730398 0.000749388225118906 2.95166891171319e-05 0.000216288498397084 0.000129131654455815 0.00735359079962208 0.00461099728905236 0.00851321924887972 7.42513412830116e-06 9.74448418973654e-06 0.000128052766130515 0.00374855545252165 0.00313224769221408 0.0053229531211811 1.79547861634453e-11 4.627291283501e-16 1.9197039827503e-15 0.000402873009694126 0.000393069819753651 0.000308525995856742 XM_005204300.1 TMED5 PREDICTED: Bos taurus transmembrane emp24 protein transport domain containing 5 (TMED5), transcript variant X1, mRNA. 0.0 5079 100.00 0.762872628726287 NM_016040.4 TMED5 Homo sapiens transmembrane emp24 protein transport domain containing 5 (TMED5), transcript variant 1, mRNA. 0.0 1725 78.31 0.553929539295393 TCONS_00169811_1 sp|Q2KJ84|TMED5_BOVIN TMED5_BOVIN Transmembrane emp24 domain-containing protein 5; 3e-168 468 100.00 0.995575221238938 1 coding 0 0 0 0 -0.00951151264289518 0.948581916917559 0.0046920439037911 0.923166651908617 CGGAGGTCTGGGTGTCAGGCGGTCCGTGCTGGCCCGGTGCCTGAGGGAACCAAGGCCTAGGAGGGTGTGGAAAAGGACTGCTGGCTCCGCCTTCAGTCCCTACGCTTTGTAGACAGGCGTTTCCCTCTCGGAGAAACACCCCTCCGCCTAGGCCTTCACCTGGAGCTTTTTCAGGCTCCAGGTTTGCCTGCCAACCACGAGGAGTCCTGGAAGGAAAAGCGGAGCATAAGTGCCGATAACCCACGCCTCTCAACGCCTTTCCCAGCCCGAGATCGCCCAGGCAGGGATGGGCGATAAGACCTGGCTACCCTTCCCCGTGGTCCTCTTGGCCGCTCTGCTGCTGCCTAGGGCGGCCGGCTTCACTCCCTCCTTAGACAGCGACTTCACGTTCACACTTCCGGCGGGCCAGAAGGAGTGTTTCTACCAGCCCATGCCCCTGAAAGCCTCGCTGGAGATCGAGTACCAAGTTTTAGATGGAGCAGGATTAGATATTGATTTCCATCTTGCTTCTCCAGAAGGAAAAACCTTAGTTTTTGAACAAAGAAAATCAGATGGAGTTCACACGATAGAGACTGAAGTTGGTGATTACATGTTCTGCTTTGACAATACATTCAGCACCATTTCTGAGAAGGTGATTTTCTTTGAATTAATCCTGGATAATATGGGAGAACAGGAGCAAGAACAAGAGGACTGGAAGAAATACATTACTGGCACAGATATGTTGGATATGAAACTGGAGGACATTCTGGAGTCTATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGTCACATCCAAACTCTGCTTAGAGCATTTGAAGCACGTGACCGAAACATACAAGAAAGCAACTTTGATAGAGTCAATTTCTGGTCTATGGTTAATTTAGTAGTAATGGTTGTAGTGTCAGCCATTCAAGTGTATATGCTGAAGAGTCTATTTGAAGATAAGAGGAAAAGTAGAACTTAAAATTCCAGAGTACTTAACATTCACAAAAAGGGGCAGAAAAATGCAATAAACTGTTACAGTCAAGACCATTAACAACAGTCTTTTCCAAAACATTTTTAGGCATTACCATTAAGTGCGAAATAAGTATAATTTTAATATGAAAGGAAAGGCTTAACTTTCATCTGTGCAAGTAATCTTATTGTTCCGATTGTACTTAAGTGTATTGCAAATATTGTGCAGGTATAAATGAATGAAGCCATGTTAATAACAGTAGTTTCCTATGTTTGCAAAAGTTTTGCAAATGTCATTAGGTGATTTAAATAAATGAACTTTAGGCCTAAATGTAACACTGAACAATGTTTTTAGAAGACTGTTACCCAGAAGTTTCTTTGTAAATGTGGCAATTACAAATTAATTGTAGAAGTTTTTCAGTGTATCAAGTTATAAATCATGAGAATTATCTAATCATGGATATCTTTAGAAAAAACTCAACTTTTCTCTTTTTACGTATGTATCTTCTAAATGTATATAGAAACACAGCTGTGAAAAAAAGGTATGTGGGATTTTTTTATAACCAAATATATTAAAATATTAACAAAAAGTATTAGTTTTATATACCTAGCCTACATTCCTAAAAGCTGACTTTTTGAATAATTCTTAAAAATACTAAAAGCATACTTATCAAAAATAGGACAGATTTTCTCTTTGAAGTGAATAAAGATCGTTCCCAATTTCTGTAAGGATACATTCTCTCTAATAGTTAACTAAGATATAGGATTTCTAAATTAAATGAGGGGAAATCACTTTATTTTTATATTATCAATAGTGTTACATTAGTTTTAATGTATTTACTGACTTGGATGATACATTAATACCATCAGTGTGATGGAAATATTGCTAAAAGAGTTTGGACCTAATGTTAAGTAAATATCTTGAGTTCTCAAAAATCATTAAAAAAAAACAATAAAGTCAATATAAAAGAATTTAGGGAAACGAGAATATCTTATCAAAATAAAATTTACTTAAACTATAAGTATCTGGAATCTGACTGGCTTATCATAATCACTCAATCCTAATATAAACCATGAGATTAATTTCCAGTTAAGCCCTACTAGTATAAATATTTATTAGTTTTTATTGTAATTTTCATAAAATGACCTTTCTGATCACTTTATTGGCATTCAAATAAGAATCAAAAACCTACAGAAGTTTCAACACTCAATATATGAACAACTCTAGTCTTTACCATCATGTCTTAAGTACTACTAACTTAATGAATTAAACAGAATTTTTAGGTTATACCAACTTGTAATATTGTTTATGTCATGTAAGAGTTAAAAACAATGAACTGATAAACCTGAGTATAGTTGGTTAGTACTGCTGAATTCTTAATAAGCAATAATAATATCCAGAGACAATGATGGTTTCATCTATAATTTATAATCAAGTGGTACAAAATGAGAGATATTTCCCTCCATCTTATATATATTTCCCTCTATTCTTCTTAGGAGAAGAATAGAAACTTAGATTTCCCAACTTTGAGGCTTTTTTAAAGTGAGATAAACGTCATGTTTAGGTGATTACCTTAATTGGCTAAGAAAATGCTTTTAAGTGTACAGGAGTAGCCCCTGTAACACATGCAAAACAAGGGCCAGTAAGATTTTTGGTTATAAAGAGCTTTTTCCTCTTCTGATAAACTAATAATGAGAACCGAATGTAAAGTACTATAGCTAATAAAACAGTACAGATATAAACTACTGCATCTTTTCTATAAAACTGTGATTAAGAACTCTACCTCTTATGTGTGGCTGGTCACTGTACTTACTGTACTCTGATTCTTTACCTAACAATGGATTTGTTACATCATTTACATTTGATTTGTGCCACTGATTTTTTTAAACCTTTGATTCAGTAACTTCCTATTATATAATAATGGCCTTATTTAGAAAACAAAAAATTTAGGGATATTGAGGACAATTTTATTTTTATAGACAAAGTGAAAACAGATTATTTAAGAAGCATGTTACCTGTATTAACCATAGAGTAAAATTTGTATGCAAAGAACTAAATTCTTTAATATTTCTAAAAGCTTATTGTTTATCTGCATCATATGGTTTTAGTGTAGTATTTTGACATTAAAACTATGCTAAAAGTGAGTAAACTGTCACTTGACAGCTTATTTTATCTTTACTTTTTACTCATATAAACTTCTAAAATACTAAAATATTTAACTAAGGCCTAGAGTTTCACTATGATTTGCATTTGGATCCTTAATGATTGGTTTTCTGTAAATGTCAAGATAAGTGGTTGAAATAGTATTGAAATAAAGTATAAACTGAAATGTCATTTTATTTTATGTATGTTTATCCTTCTCAAGTATTATGTCCTAAAATTGACAAAAATTGAATACCTATAATTGTATGCTTCCCCAAAGAAAATTCTTTTATCTGAAATTTTCAAAGATATTGATTCAGCATGTAATGGTTTTTCAGTTGAAATTTAATAATGCACAATTAGTGTTGCTCAAATGCTTTATACTTATGAACAGACACAGCCATATTATATGAGCACTGAATACTGTGCTGAGTATATATAATAAAAATTACAATCAAAGAATGTCTTATTTATCTACCAGTCATTATAAATACTGTCTAATCTTTAAAGCCTTCATTGATGTCATCTTAAAAGTGTGCTCTCTTCCATTTGAAAACCTATACTTCTCTGCACTTTTTATTGTGAATCAT EMBV3_10263 GCATTGGAATGGGCAACCTGGGACCTGCAGGCATGGAAGGACCCTTTGGTGGTGGTATGG Variant GeneID:515290|HNRNPM:XM_002688875:100_cdna 957^1001 4 EMBV3_17328 GeneID:515290 7 GENE HNRNPM HNRPM heterogeneous nuclear ribonucleoprotein M EMBV3_42100 GGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCC Gene GeneID:791040|MIR22:NR_031346:174_cdna Constitutive 0 NULL GeneID:791040 19 GENE MIR22 MIRN22 bta-mir-22 microRNA mir-22 EMBV3_20069 AGACAGGAGACAGCTGGAGCCAGGAGAGTCAGATGGTCAAAACACTGCCTTACAACAAGG Gene BVT0101_009927 + 0 NULL GK000003.2:83672270-83834790 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23308 CTCCAGTGCTGGTGGTTTCCAGTTCCTTGCTTTCAACAAAACTGAAGGAATACCCAGATT Gene BVV0102_246331 + 0 NULL GK000018.2:8516799-8594077 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082197 TCONS_00082200 TCONS_00082201 TCONS_00082199 TCONS_00082198 1 XLOC_050935 Coding TCONS_00082200 XLOC_050935 Coding Coding LOC100337091 18:8302540-8567443 j TSS62047 7465 1 TCONS_00082200_7 1266 0.0547890154052244 37 0.97195944160482 0.00368382912645763 0.00227209022590071 0.00189109550440434 0.00094913914477113 0.00102522627083793 0.000231637916620846 0.000395111240933412 0.00174327909068323 0.00135157657887842 6.38859375577036e-05 2.38491655292744e-05 1.32987093591254e-05 0.000367646566014431 2.51098463247043e-07 0.000700444296089832 3.0067642045314e-13 0.000132443044928675 3.3174018588572e-83 0.00149581963507689 0.0021065157315109 0.000415521499849794 1.34412700878621e-09 3.50361408537981e-05 2.56320614797613e-05 0.00380682660842216 0.00341230727465454 0.0017243101014147 8.80237279182157e-05 2.89559867040756e-08 3.86693017770959e-38 XM_003587203.2 PLCG2 PREDICTED: Bos taurus phospholipase C, gamma 2 (phosphatidylinositol-specific) (PLCG2), mRNA. 0.0 7451 100.00 0.55324849296718 NM_002661.3 PLCG2 Homo sapiens phospholipase C, gamma 2 (phosphatidylinositol-specific) (PLCG2), mRNA. 0.0 5151 86.67 0.574413931681179 TCONS_00082200_7 sp|P16885|PLCG2_HUMAN PLCG2_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2; 0.0 2511 94.07 0.997630331753555 9 coding 0 0 0 0 -2.18160304696946 0.00662834881671449 -0.0464559123305286 0.636757388763424 ATGAGGGGCAGTGGGCATCAGACCTACATCTTACGTCAGGAGCTGGGCAGCGAGACTGGAATCTCCACGCTGAGACGAGGAATGGCCAGGACGAGCGAGGGCAGGGTGGCCGCTCCGACGCCCCTGGGCCCCGGGCTGCTGCAGAACCAGAACCAGGCGCTGGGGGCGGGAGGCAGCGTTCCAGGACTCCAGGCCCGTGACGGGGCGGCCCCGGAGGAGTCACGTGGCGCGCGGCCGCGGCCGAAGGAGAAGTAGCAGCGCCCGCGTCGGAGGGCGTGCGCGGCAGGGAGTGCCCGGAGCCTGGACAGCGGGTGGCTACGCGCGGGACCCGGAGCCCGGACCCGCGGCGGAGGCGCGGCCAGCGTCCGGGCGGGGACGGCCACTTCCTCACCCCTGACCGGCGCCACTCCGTCGCCTCCTTGTTCACCCGCTTCCTCCTCGCCTCCCCCACTGGGCAGCAGACGATGGCGAGCACCATGGCCAACGTGGACACCCTCCCGGAGTATGAGAAGAGTCAGATCAAGCGGGCCCTGGAGCTGGGCACCGTCATGACCGTGTTCAGCTTCCGCAAGTCCACCCCGGAGCGGAGGACCGTCCAGGTGATCATGGAGACGCGGCAGGTGGCCTGGAGCAAGACGGCCGACAAGATCGAGGGCTTCCTGGACATCATGGAGATAAAGGAGATCCGGCCGGGGAAGAGCTCCAAGGATTTCGAGCGCGCGAAAGCGGTCCGCCAGAAGGAAGAATGCTGCTTCACCGTCCTGTATGGCTCCCAGTTTATCCTCAGCACGCTCAGCCTGGCAGCCGACTCGAAGGAGGATGCCGCTAAGTGGCTGTCTGGCCTGAAGATCTTACACCAGGAAGTGATGAGCGCGTCCACCCCCACCATCATCGAGAGCTGGCTGAGAAAGCAGATTTATTCTGTGGATCAAACCAGGAGAAACAGCATCAGCCTCCGGGAATTGAAGACCATCTTGCCCCTGGTCAACTTCAAAGTGAGCAGTGCCAAGTTCCTCAAAGATAAGTTCCTGGAAATAGGCGCACACAAAGATGAACTCAGCTTTGAACAGTTCCATCTCTTCTATAAAAAACTTATGTTTGAACAGCAAAAATCGATCCTTGACGAATTCAAAAAGGATTCTTCCGTGTTCCTCTTGGGCAACACCGACCGGCCAGACGCCTCTGCTGTCCACCTGCACGACTTTCAGCGGTTTCTCTTGCATGAACAGCAGGAGCTTTGGGCTCAGGATCTGAACAAAGTCCGTGAGCGGATGACAAAGTTTATTGACGACACCATGAGGGAAACTGCTGAACCCTTCCTGTTTGTGGATGAGTTCCTCACGTACCTGTTTTCCCGGGAGAACAGCATCTGGGACGAGAAGTACGACGTGGTGGACATGCAGGACATGAACAACCCCTTGTCTCATTACTGGATCTCCTCGTCGCACAACACGTACCTCACGGGGGACCAGCTGCGGAGTGAGTCGTCCACGGAGGCCTACATCCGCTGCCTGCGGATGGGCTGCCGCTGCATCGAGCTGGACTGCTGGGACGGGCCCGATGGCAAGCCCATCATCTACCACGGCTGGACGCGGACCACCAAGATCAAGTTCGACGACGTTGTGCAGGCCATCAAAGACCACGCCTTTGTCACCTCCAGCTTCCCCGTGATCCTGTCCATCGAGGAGCACTGCTGTGTGGAGCAGCAGCGCCACATGGCCAGGGTGTTCAAGGAAGTGTTTGGAGACCTGCTGCTGACCAAACCCAAGGAGGCCAGTGCCGACCAGCTGCCGTCGCCCAGCCAGCTGCGCGGGAAGATCATCATCAAGCATAAGAAGCTGGGCCCCCGCGGTGACGTGGACGTCAACATGGAGGACAAGAAGGACGAGCACAAGCAGCAGGGCGAACTGCACATGTGGGACCCCATCGACCAGAAATGGACTCGGCACTACTGTGCTGTTGCTGATGCCAAGCTGTCCTTCAGCGATGACATTGAACAGACTGTGGAAGAGGAGCTGCCCCTGGATATACCCCCAACAGAGCTGCATTTTGGGGAGAAGTGGTTCCACAAGAAGGTGGAGAAGAGGACAAGTGCCGAGAAGCTGCTACAGGAATACTGCGCCGAGACAGGGGGCAAGGATGGGACCTTCTTGGTGCGGGAGAGTGAGACCTTCCCCAACGACTACACCTTGTCCTTCTGGCGGTCGGGCCGCGTGCAGCACTGCCGGATCCGCTCCACCATGGAGGGTGGGACCATGAAGTACTACCTGACCGACAACCTCATGTTCACCAGCATCTACGCCCTCATCCAGCACTACCGAGAGACACACCTGCGCTGTGCCGAGTTCGAGCTCCGGCTGACCGACCCCGTGCCCAACCCCAACCCGCACGAGTCCAAGCCGTGGTACTACGATGGGCTGAGCCGTGGAGAAGCGGAGGACATGCTGATGCGGATCCCCCGGGACGGGGCCTTCCTGATTCGGAAGCGGGAAGGTACCGACTCCTACGCCATCACCTTCAGGGCCAGGGGCAAGGTGAAGCACTGTCGCATCAACCGAGACGGCCGGCACTTCGTGCTGGGCACCTCCGCCTACTTCGAGAGCCTCGTGGAGCTGGTCAGTTACTACGAGAAGCACGCGCTCTACCGGAAGATGAAGCTGCGCTACCCCGTGACCCCCGAGCTCCTGGAGCGCTACAACACGGAAAGAGATATAAACTCCCTCTACGATGTCAGCAGGATGTATGTGGATCCCAGTGAAATCAATCCTTCAATGCCTCAGAGAACCGTGAAAGCTCTGTATGACTACAGGGCCAAGCAGAGTGACGAGCTGAGCTTTTGCCGCGGTGCCCTCATCCACAACGTCTCCAAGGAGCCTGGGGGCTGGTGGAAAGGAGACTATGGGACCAGAATCCAGCAGTACTTCCCGTCCAATTACGTCGAGGACATTTCACCAACAGAAGGGGAGGAGGTGGATAAGCAGATTATTGAAGACAATCCCTTAGGGTCCCTTTGCAGAGGAATCCTGAATCTCAACATAAGGAATGTTGTAAAAGCCCCACATGGGAAGAACCAGAAGCCTTTCGTCTTTATCTTGGAGCCCAAGAAGCAGGGCGACCCTCCGGTAGAGTTTGCCACGGACAGCGTGGAGGAGCTGTTTGAGTGGTTCCAGAGCATCCGGGAGATCACCTGGAAGATGGACGCCAAGGAGAACAACATGAAGTACTGGGAGAAGAACCAGTCCATCGCCATCGAGCTCTCGGACCTGGTCGTCTACTGCAAGCCAACCAGCAAGACCAAGGACAACCTCGAAAACCCTGACTTCCGAGAAATCCGCTCCTTCGTGGAGACGAAGGCTGACAGTATCGTCAGACAGAAGCCCAGCGATCTCCTGAAATACAATCAAAAGGGCCTGACCCGTGTGTACCCCAAAGGACAGCGGGTGGACTCGTCCAACTATGACCCCTTCCGCCTCTGGCTGTGCGGCTCCCAGATGGTGGCACTCAATTTCCAGACTCCAGATAAGTACATGCAGATGAACCACGCCCTGTTCTCCCTCAACGGGCGGACGGGCTACGTCCTGCAGCCTGAGAGCATGAGGGCGGAGAAGTACGACCCCATGCCACCCGAGTCCCAGAGGAAGATCCAGATGACCCTGACGGTCAAGGTGCTGGGGGCCCGTCACCTCCCCAAGCCCGGCCGCAGCATCGCGTGCCCCTTCGTGGAGGTGGAGATATGCGGAGCGGAGTACGACAGCAACAAGTTTAAGACGACGGTTGTGAATGACAATGGCCTCAGCCCTGTTTGGACCCCAACGCAGGAGAAGGTGACGTTTGAGATTTATGACCCCAACCTTGCATTTCTGCGCTTTGTGGTTTATGAGGAAGATATGTTCAGCGATCCCAACTTTCTGGCCCATGCCACGTACCCCATTAAAGGAATCAAGTCAGGATTTAGATCTGTTCCTCTGAAGAACGGCTACAGTGAAGACATTGAGCTGGCGTCCCTCCTGGTTTTCTGTGAGATGCGGCCAGTCCTGGAGAGCGAAGAGGAGCTGTATTCCTCCTGCCGCCAGCTGCGGAGGCGGCAAGAAGAACTGAACAACCAGCTCTTTCTGTACGACACCCACCAGAACCTGCGCAGCGCCACCCGCGATGCCCTGGTCAGAGAATTCAACGTCAACGAGAACCAGCTGCAGCTGTACCAGGAGAAGTGCAACCGCAGGTTAAGAGAGAAGAGAGTCAGCAACAGCAAGTTTTACTCATAGAAGCTGGGTCCATGTGTAAGCATGTCGTGTATGCGTGTGAGCTTGCATGGAGGAGCGTGTGCTCTGTTCAGACCCTGGGAACATGCTCACGTGTGAGGTCGTCACTCCTCCAGCCTGTCACCGAGATGACATATGTGGAGACCCAAGTAGCATGAGTTGGGGTAACCTTTTCATCTTGGACACTTTCTTAACTTACAGTCTCTAAAGAGGATCCCAAAATGTGCTCACACGAGGCCTCTCACGTTCCAAACCTCCCTGAATAAATGTAGTGAAACTCGATCAGTGACCTTCTGTGCACGAGCTGTAGAGTGAGCAGGATTCCTTCTCTGGCCTCTAAAGACCCAGGTAACTGACTTCTACAGAAGATGAGCTGGGTCTGTAAGGAACTAACTCATTAGATTCTGAAAAGGATCTGAACTAAAAGGCAAATGATCTCACACTGAAGGCCTCGGACTTCACCAGGCCTGGAGAGGAGACCCAGTCCTGCCCCAGCTCAGAGCACTTGAACTCCTTCTGGTGGCTGGACCCGCCTGCAGCCGCACATGAAGGGTGGGGTGGGCCATTCATTAGGACAGGGACTTGCTGGGTGAGTGGGGTCAAGGGTGGCAAGCTGGGGGCTTTCTGACTTACAAGCCTGTCAGAGACCAGAGCCCCGTGAAGGACTGGCCAGCTTCTTACCCCCGCGGCCTGTCCACTCCCTGGTCTGCACAGCCGCAGGGCCGCGGGCTTACTCACTGCTCACACGGGGTGAGACAGGGTGGGCTCCCTGGGTGACCCCGTTTCCTGAAGCAGTGAGCTAAGCTTTAGGGAATGACAGAAAATCTCAGGTGCAGCCACCCCCGAAGGGGCAGAGCCACCGAGGACAAGGCGATACTCGTCTACATCCTGGGATGCTATTTACTGATTTGTACATGTGATGCTTTAGGAAGGCTTTTTCAAAGCGCAGAAGGTGGGGGGCGGGGGTGGTCAGCAGAGGCACAACACAGAGTGAACTGAGAACTGACTTAGGAGAAAAGAGGTTTACCTATGGGGAAAAAAAAATGCTGGGAGGAACAAACTAACAGTCGGCCTAGGGGCTTTACTTGGATGGAACTGGGTCCTAGAAACCCACTCCCCTTATGGTCCTGAGCTTAGCGTGTCTGTATCAGCGGAAGAGTCCATTAAAGCCAGCCCTGCTCTGTGCGATCAGAAGACCCCCTCCTCCATTCCACACAAATTTACTGAGGACTTCCACACAGCAAGCAGTAAAATCAGGGGAGACCATGTGTTTAAAATGTTAAGGAAAAAACAGCCATTATCCTGGCCTCATGGCACCTCACCATGTGCTTCTAAAGGAACGCATTTTCCTCCCATGAGGCCAGGAGAACACACCCGAGAGCAGACTGACCAAGGTGGGGCTCTTAGTTATTCCCGAGTCGAAGCTGCTAGTTTATTTGGCATTGGCAACCGAGGGACGAGTATTCCTGGTGGTAAAAATGTTTAAAGCACCTTTCAAGAACGCTCAGATGAAACAGGCACTGAGCTGGGTGCTGCAGGGCAGCCACAGTGCACAGCGTCCTGTTAGCTGTTGGCCAGGCAGCCGGTGGAGCCTCAGCTCAAGCTGCTTTTGGCTCCGTCATTTTCCCTACAAGCTCAGGTGTCGATGGCATTACCTATTTGCAGCCTGGGGTGTGTAAAGGACATAACACTTTCCCACTTTACTCCATTTAAAAGCTCAAAAGCTAAGATCTGGGTCCCCTTTCTGCTTAAAATGCATTTATCTGCTACTTTGTCAAAGGAATGATGAAGTAGCAGCATAGAAGACAGAAGGCTCAGCATCTGTTCAGCTGCTGTGTTGTAGAATCCACACCCAGCCACATCCTCGCAGAGTGGAGTGGAGCAGAGCAGCTGAGGGGGGTGCTGACATTCTCCACGGTGCTGAGAAGAACCCTCGCCCCGAAAGATTGGCTCCTCCTCTCAGGTGCTACAGTGATGTCGATTCAGCATCACTGGGTATTTGCCTTGGTACCACCGTTCTCCCCATGATAGGGTAACACATGAGTCTGGTCGTGTTGGTGTTAGGAGTCTCTCCATGAGGATGCACAGAGAAAGAGGGGCACAGATGACATCGCTGCTCTTCCCTGAGTCTGCCTGGAAGCCACGTAACCTGAGTATAAATACCTAGCTGAGACTGTGCTCTCACAGCCAGGTAAAGAGCACAGCCGATTCAGATCCAGCAGGAGAGTGACAGGAACGCTGTGAAAGATGGCCACGACTGCCTGTGTGCACAACTGTCTTTATTCTACTGAATAAGGGAAATGGTGAACATTAGTTACTACATGGAAAACGAAATAGATGAAGCTGGTTAGATCATTTGAGTTTGGGAAATTTAGGTTGGACAAAGTTAATTTCTCTGCTGTAAACTTGGCTATTCTAACGTGCACACTGAAGAGGGGTTAGAATATCACATTTCCTAAGTTTGATCTGAGAACCCTTTTGCCAAGAAACATCTTACAGGACTAGTTACATAGGAACACATTTGAGGACCTGCTTCTTTATTAAAGACAGTGACATGATCTAATAATTTATATGCTTTACGATGTAGTTAGAGCTGAACTTAAGCCAAGGCCAGTGGTTTTTAAACTGGGCCAGCCTTACCCCTAGCAGTCTACCAGAGCTTTCCAAGGAGCCACAGACTCATTTTTTCAGCGGATCAATTTTCAGATCCTCAACTTCCTGTTGCACTCTATCCAAAGATTCATCAGTGTGAGAAAATGCCCTTTTCTCCCCTTACAGAAGGAAGTAGGTCTTCTCCCCACATTCAGTCTTACTCTAGAGCAGGACTCAAGATACAATTGAGTATAGTGTCTGGAAAGTGCAAGCCTCTTAACAGGATACGGGTCCTCCTCCAGTGCTGGTGGTTTCCAGTTCCTTGCTTTCAACAAAACTGAAGGAATACCCAGATTTCTGAGTATCCTGAGATTACCCTGCTACCACTAACTCCTTCTGTTCTCATTTGTCTGTGTGAAAAAAGGATCGAACTGAGAACTGACTTAGGAGAAAAGAGGTTTACCTATGGGGAAAAAAAAAATGCTGGGAGGAACAAACTAACAGTCGGCCTAGGGGCTTTACTTGGATGGAACTGGGTCCTAGAAACCCACTCCCCTTATGGTCCTGAGCTTAGCGTGCCTGTATCAGCGGAAGAGTCCATTGAAGCCAGC EMBV3_05104 ACATGCCTTAGTGCCTTTATGGCCAGTTCGAGTCTTTCCTGCCCTGTGACTTGACGTTCC Gene GeneID:507828|SFRS6:NM_001035272:934_cdna UTR3_Alt 3 NULL GeneID:507828 13 GENE SFRS6 MGC128807 splicing factor, arginine/serine-rich 6 EMBV3_15218 TGACCCTCTGAAGCCTGCACCCCTTTTACCTTTGGTCACACCGGGCATTTCATGTGTCTT Gene GeneID:510998|MPP1:NM_001075484:2_cdna Constitutive 1 NULL GeneID:510998 X GENE MPP1 MGC139660 membrane protein, palmitoylated 1, 55kDa EMBV3_34158 TCCTTAGCGTATTGTGATGTCTGCCTGCGTGATCGTCCAGTTCCTCCTTTGTTCAATGCG Gene GeneID:100138392|LOC100138392:XR_084731:51_cdna Constitutive 0 NULL GeneID:100138392 X PSEUDO LOC100138392 NULL similar to coagulation factor VIII-associated protein EMBV3_16475 GGTGCTCACACTCGCCTGCACTGACACCTTTGTCCTTGAGCTCCTGATGATTTCCAACAA Gene GeneID:514367|LOC514367:XM_002693812:57_cdna Constitutive 0 NULL GeneID:514367 15 GENE LOC514367 NULL similar to olfactory receptor MOR239-1 EMBV3_09722 TGGTTACAGCTTTTCGCTGACTACATTCAGGGTACTTGTGCACAGAGCTCGAAAACTAGC Variant GeneID:539141|PSMA2:NM_001034662:58_cdna 65^274 5 EMBV3_19460 GeneID:539141 4 GENE PSMA2 MGC127174 proteasome (prosome, macropain) subunit, alpha type, 2 EMBV3_33321 CCTAGGAATGGTGGATGGTTTGTTGCTCACACCCATAGCCATGAGCTTCCCCTTTTGTCA Gene GeneID:524160|LOC524160:XM_002689130:115_cdna Constitutive 0 NULL GeneID:524160 7 GENE LOC524160 NULL similar to olfactory receptor, family 2, subfamily T, member 3 EMBV3_00408 TGAGATGTCACATGAGAACCGAGCCTGTGGCCTGACAGGCATCATCAGTCACTTTTTCCC Gene BVT0102_197061 - 1 EMBV3_17028 GK000013.2:38284537-38289289 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37276 ATGTCTACCTGCAAGAGAAGGAATACAGCGACTGCGCCTGGGAAATCGTCAGAGTGGAGA Gene GeneID:523509|LOC523509:XM_002689534:187_cdna Constitutive 0 NULL GeneID:523509 8 GENE LOC523509 NULL similar to interferon-tau EMBV3_36012 GCTGCCGAGTGAACATGAAGGACTTGCCCTCCTTGGAGCTCTTGCCACCCTATATCCTGT Gene GeneID:614194|CTU2:NM_001035444:412_cdna Constitutive 0 NULL GeneID:614194 18 GENE CTU2 MGC127795 NCS2 UPF0432 cytosolic thiouridylase subunit 2 homolog (S. pombe) EMBV3_27634 CTGCTGTCCCCACACCAGCATTGAGTTCGTTAATGGGTTCTCATGACCAAAGGCTGCAAA Gene BVT0102_176583 + 0 NULL GK000002.2:120003208-120039434 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26430 CTCTGTTTAAGCTGCTTTCTATACCATTGCCAATCACCTTTTTGGACTTGGAAGTGCTAT Gene GeneID:537654|PIP5K1B:XM_002689633:3_cdna Constitutive 0 NULL GeneID:537654 8 GENE PIP5K1B NULL phosphatidylinositol-4-phosphate 5-kinase, type I, beta EMBV3_01852 CTGCAGACAATCCAAGCTCCAGTAGAGGGAGCAAAGCTGGGAAACTGCCTTTGAAATGAC Gene GeneID:523498|MTSS1:XM_002692623:70_cdna UTR3_Alt 2 NULL GeneID:523498 14 GENE MTSS1 NULL metastasis suppressor 1 EMBV3_29027 GACCACTTTTTCTGTGAGGTTCCTGCCCTTCTCAAGTTGTCCTGTGCTGACACAAAGCCT Gene GeneID:515704|LOC515704:XM_002697425:147_cdna Constitutive 0 NULL GeneID:515704 23 GENE LOC515704 NULL similar to Olfactory receptor 2B3 (Olfactory receptor OR6-14) (Olfactory receptor 6-4) (OR6-4) (Hs6M1-1) EMBV3_03228 GGTTGTTAATCACTTTGCCTGTGAGATGTTGGCTATGCTGAAGCTGGCCTGTGTGGACAC Gene GeneID:527779|LOC527779:XM_002687021:79_cdna Constitutive 0 NULL GeneID:527779 4 GENE LOC527779 NULL similar to olfactory receptor Olr809 EMBV3_08100 AATATGTGATCTACAAGTTCCTGACGGTGTTCCTGGCTATTCCCTTGGCTTTCGCTGCGG Gene GeneID:493642|CAV2:NM_001007808:27_cdna Constitutive 0 NULL GeneID:493642 4 GENE CAV2 NULL caveolin 2 EMBV3_02268 GTATGGTTCCTACATGATCTGGAAAGAGCTGGGGGGCTTCTCGAAGGAGGCGGTGGTTCC Gene GeneID:281033|TSPO:NM_175776:129_cdna Constitutive 0 NULL GeneID:281033 5 GENE TSPO BZRP MGC128236 translocator protein (18kDa) EMBV3_15935 ATATACACTGGAAGGGATCCTGAAAGGTTATCTCATCTGAGTGATTTTGAAACTTAATTT Gene GeneID:515302|WDR76:XM_002696812:579_cdna Constitutive 3 NULL GeneID:515302 21 GENE WDR76 NULL WD repeat domain 76 EMBV3_32940 GGCCAAAACCCAGCAAGATATGCAGTCCAGGCTTCCAGGTCCCTCTAGGGTGCCAGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13186 GGACAATAAAAGTCTGGCAGTGGAAGGTAGTTTTAAGTTAGGCTACAGGGCGAGCCCACC Gene BVT0102_411685 + 0 NULL GK000009.2:66446002-66492548 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253788 TCONS_00245588 2 XLOC_156726 XLOC_150763 Coding TCONS_00245588 XLOC_150763 Coding Coding - X:118952362-118956507 - TSS184317 4145 3 TCONS_00245588_1 77 0.327382388419783 1 0 0.000970997735066287 0.000555216706564837 0.000525502270716444 0.000428859840490059 0.000683317864551417 0.000335390840071729 0.000320243228834991 0.000270802251720063 0.000419707926607864 4.13600312614471e-06 1.7830647721482e-05 9.89596065072636e-06 2.94964905219733e-05 5.19627774898513e-05 2.48080345012972e-05 2.82391890915881e-05 0 0 0.000936953075508277 0.000704674436863543 0.00028046116172402 1.70959485937966e-06 9.83679587798153e-07 0 0.00051370419112426 0.000755362074721785 0.000259906430371612 0 2.69131165828079e-06 3.10724942041851e-11 NM_001075135.1 UBE2D3 Bos taurus ubiquitin-conjugating enzyme E2D 3 (UBE2D3), mRNA. 3e-90 338 84.69 0.0735826296743064 NM_181888.3 UBE2D3 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), 3e-97 361 78.62 0.106151990349819 TCONS_00245588_6 sp|O15480|MAGB3_HUMAN MAGB3_HUMAN Melanoma-associated antigen B3; 3e-07 46.6 66.67 0.551724137931034 0 noncoding 0 0 0 0 -1.16109109614262 0.0477367021743026 0.0271494058541114 0.698876587267788 CTTTAGGGAAATGAACTGTCACAGAGAATAAACTGCCTTGATATGTATGGGTTGCCATTCTTTTCCGTAATTGTGATTTGCCCATGAAATGTATCATCCCCAACTGGACCTGCAGAATATTGTGCTGGAGGGTCCCTGGCGACATCACTAAGTTCCTTATTAATCCATTTCAGTGCCACCATCTGTGCTTTTTGTCTGACTCCTCACTGTCTCAGTGTGTACTCAAAGGTCCGGCCAAAACTCCTGATTATCTGGTGGCTGGGAAGGACTATCTCTTCATCTCACACTGGCTCTGCCAGGCACAGGTCCCTTCTTAATAAACAGAGAGGTTGGACTGGGGTGGGGTCACTGGCAGAGAGTAGATGAGGCTGGAGGGGAAGGGGAAACAAGCAGTGCAAACCCTTAGACTCAGACAAGCATCGAGTACCTGACGGAGACCATCCAAATTAGTGGCTTCTTTTTTATTTTTTTTTTTTCAGATATACAACCAGGAGTGCGATTGCTGGGTCATGTGTTAGTTCTCTTTTTAGATTTTGAGCACGCTCCTTACTGTTATCCATGGTGGCTGCACCAATTGATATTCCCACCAACAGTGTATAGATCTTGTCCACATGCTCACCAACATTTGTTACTTCTGTTCCTTTTGAATGATAGCCCTTCTGATAGGTATAAGATAATACCTCATTGTGGTTTAAATTTGCATTCATAGGACGATTAACGATGTTGAACATCATTTCATGTGCCTCTCAGCTATTTGTATGTCTTCTTTGGAAAAATGTGCATTTAAGTCTTCCGCCCATCTTTTTCTTGATTTTTTTTAGACTGTTATATCAACTGTTTATATATTTTGGATATTAACCCCTTATTGCTTACATCATTGGCAAATATTTTATCCGATATAATAGGTTGGCTTTTCATTTTGTTGATGGTTTCCTTTGCTGTGCAAAAGCTTTTAACTTTAATTACAACACATTTATTTACTTTTGCTTTTATTTCCCTAGCTTTCAGAGACAGATCCAAACAAATATTGTTATGATTTATGTCAAAGAGTGTTCTGCTCATATTATCTTCTAAGAGTTTTATGGTTTTCACTCTTATAGCTAAGTCTTTAATCCCTTTTCTGTTTACTTTTGTATATAGTGTTAGAGAATATACTGATCTCATTCTTTGAGAGCTACATATCAAAGAATGAGATTAGAGTGTAAATACAATTTGGTAGTCAGAAAATTAAATGTTCTTTTATATTTGAGCCAGTAATTCAGTGTTTTCAGAAATTAAATCTGAAGAGACATCCACAACCATATGAAAATACATAAATGTCCATGCACATGTTAATTGAGGGAACATGATATATGCACAGAGTGGAGTACTACAAAGCTATAAAAAGGAATGAGTACAATTTTGTAAACTAATATGGAGTGCTTCCATGATAGATATAGATATATAAAAGAATGTGGGAGTTTGGGGCTAATGTCAATGATACCAAGTCAAGTGCCTTCCCATTCTGGTATGAAGAGGCTTTGAGAGCTGAAGAAGACAGAGCCAGAGCCAGAGCTGCAGCCAGGGCTCCTATGGTGCCAGGGCCAGTGCACTTTCCTGAGCATGTCCAAATTTCCTCCCACCCCTAGTGAAGTCTGAGCAGATATTTCACATTGCATTTCAAGAAAGCAGGCAAACTTCCCACTAGTGGAGGGCCACGGTGGGGCTCATGGAAATTCAGCGTATAAGGTATTTATTTGTGTTCCAATACAATATGCACAAATTGGAGGTTTTTCTTTTTTCTGTTTTTAAATATTGTTCCTTTTAATTAAAGATGTGTTTAGCTTCAGATTCCAAGTACACTAATGGCACACCTCTGACATGTACTGCAGATTATCAAGTTGAAAACTAAGAAATTTCGTATTACATAGCACAGACTGAAATCCTTGAATCATTTCTTGTCATTCGGAACAAGATAACATGATATTGCAATATGGATTTTTTTTGTGAAAATGGAAATTTTTCCACAGTGAAGTCTGTGTGATTATCAGATACAGAAAAAAATTTTAAGAAGTATTCATTTCTTCGTCTGTTTTATTTGTTTAGTCTTTCTTTGTAATATTGAAGTTTATTTACCTGGATTGGCTTCGCTTATTTAAGAATGTGGAAGAAGTGAAATCCCAGTAACATTGCTTTCTTGCACACTTGCACTATAGTTGTTCAAATATCAATTTAGCATCTGCTCTTTGGAAGGCTTCTGGGTGGTTTTGGGGATGCTAAGAAAAATAAACTCAACCCCTTCTTATAGAATTCTAGTGTCTAAGAGCAGCATTCATCTAAAGTAGCTGGTGAACTGAGATCTAGGGGCCTGATAAAAATGAGGTGTAAGGAGGTGAGGGGATTGAGGGCTTCCTCATGAGGAGTCTAGTGTAAATACAGTGAGGCAAGGCACTTGGAGACTTTAGGACAATAAAAGTCTGGCAGTGGAAGGTAGTTTTAAGTTAGGCTACAGGGCGAGCCCACCAGGGAGGCTGTGGAAACACTGAATAGGGGTCAGACCCTCAGATGGCGGGTCTCAAAGTTGAGAGACTTAAGCCTGGAATGGAAAACTACCCCGAACAATTGCTTTGGAATTATGGGGCTTCCCAGGTGGCTCAGTTGTAAGGAACCCGCCTGCCAATGCAGGAGACATGGGTTCAATCCCTGGGTCAGGAAGCTGCCCCTGGAGGAGGAAATGGCTACCCAATCCAGTATTTTTGCCTGGAGAATCCCATGGACAGAGCAATCTGTTCAGTCCATGGGGTAGAAAAGGGTCAGATACCACCGAGTGACTAAACAGCAACACAAGTAGACCAGAGAGAAATCCCCCTAGGGAGGGGATGGAATGTGCCCTGTGCTCCTGTCCCAGTGCCCGTGAACACAGTGCACAACCTAGATGTTTCATGCATATCATCTCCAAGGAGATTCTGTGAAATAAAAGTAATAGTAGAATGAAACCGGAAACTCAGAAGCTAGTGGGCTAACACTCTTTGCTGTGAGTCGTGGAAACAGAGCTCATTTTATTGAAAGGGCATTCCATTCAGCGTTTTTGGCTACGTTGATAATTCCACCAAAGTCTATGAGGTGAGTCTATTTTAGGTGATGGTGAAATTGATGAAGATGCGGGCTTATTTTATTTAGTTACTTATGTATTTGGCTATGCTTGGTCTTACCTTTGGCACGCAGGATCCTTGATCTTCCTTGCAGCCTGCGAGTTCTTTAGTTGCAGCATGAGGAATGTTTCAGTTGTGGCATATAGGATCTTTAGGTGTGGCTTGTGAACTGTTAGTTGCGGCAAAGCTGTGGCATGTGGGACCTAGTTCCCTGATCAGCAGTGGAACCCGGGCCTCCTGCATTGGGAGTGCAGAGTCTTAACCCCTGGACCACTAAGGAAGTCTCTAGGAGTTGTTCAGATGAAAGAGCAGCCGGGAAGGAAGACAGAATTAGTCTCAGAATCAAATTTAGATTCTTCGAGTTTCATTCAGTTAAAAACATACCCCCACACTCAAAATACGATCTAGTAGTGGAAATGAAAGATTCTTTCTAAACAGCATTTTGGACTGATTTGGTGTTCCATGTGCTAGAATGCCACAGATTCTCTGACATCTCCTGGATTTAAAAGATTCCTCAGGGTCGGTGGTATCCTCCAGGATGAAACTATTCATAATCATAGTAAAAACAGATATTGTGTAAAGTCTCAGTGTGGTCCAGGCAGTGTGCCAGGTGCTTTAGCTACATGCCACTAGCCCTACAAAAGCCACTTCACCTGAGGCTCCCCGAGTTTGGGGATGGACCCAAGTCCACACAACTGATATGAGGCAGAGCTGGGACTAGAGCGCTGGTCTGAATTTAACCACAGCATGTACCCTTCCACTTGTCCCGATCTGAGGTGCTCATGAGTCAGTTAATTCACTGTCTTCTAGCACTTCAACATGTATCTTGAGTGACAGAAAGAAGGACTCTGTGATGAAAACACTGGGATGAAATACATAGCCAAGGCAATATAAACACCATAATAATTAAGAGGTGTGAATAAAGGGGAGAAGGGGGTAATGCTCAGTTAGCATATGATCACCTGCATGTGCAATTCAAACACCCTCAAGTGATCGAGGGCTTACAAGATTATC TCONS_00245587 s 3' 38366 TCONS_00245587 s 3' 38366 EMBV3_06703 CGTGGTCAGGAACTCCCGGTGCTGTAGAAAGGAACCGAAATTTTGTGCAGACCACCCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34080 CCAGTACCTCTGCGACGTTCAGCACATCTTGACAATTCCAGGTCAGGCTTTTGTGCCCAA Gene GeneID:533438|TFB1M:NM_001076896:5_cdna UTR3_Alt 3 NULL GeneID:533438 9 GENE TFB1M NULL transcription factor B1, mitochondrial EMBV3_23805 CTCAGCCCCGGAAGCTTGGATAAACTTGGGTCAGAACCTTTGAGGTTTCTGAGGACTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43277 CCAGCATAATGAGTTCTTGGTGATGCAGTGGTGAGACTTGTAATGAGCAAAGCTACCTGG Gene BVV0102_079038 - 1 EMBV3_38568 GK000030.2:63056848-63076961 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00556 AGGTCACCATCTCGCAGCAGCTCGGCCTGGAGCTCAACACTGTCAGCAATTTCTTCATGA Gene GeneID:618065|LOC618065:XM_002689182:246_cdna Constitutive 0 NULL GeneID:618065 7 GENE LOC618065 NULL similar to One cut domain family member 3 (One cut homeobox 3) (Transcription factor ONECUT-3) (OC-3) EMBV3_20054 ACGGCACTGCAGACAACTTGAGACCCATTTTGAACTTCTGACCTCCCAAACTCTGTGGTG Gene BVV0102_154760 + 0 NULL GK000012.2:59146634-61064672 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037107 TCONS_00037106 TCONS_00037108 TCONS_00037109 1 XLOC_021299 NonCoding TCONS_00037107 XLOC_021299 NonCoding NonCoding - 12:59615588-59709615 - TSS26848 421 0.572446555819477 3 0.995554421117563 9.69467399786435e-05 8.56474930897017e-05 0.000955327970567056 0.000258991944523819 0.000140724947631998 0 3.67423886148274e-09 0 0 0.0010213749146831 2.1196217262571e-09 0 0 0 0 0 0 0 0.0016938782804912 0 0 0 0 0 0.00182674458533639 0.00028449186061205 0.000147705022235796 0 1.15311475355649e-05 0 XM_005201591.1 YEATS2 PREDICTED: Bos taurus YEATS domain containing 2 (YEATS2), 7e-43 178 93.22 0.27790973871734 0 noncoding 1 1 1 0 0.104326753733998 0.544361891950358 -0.00672648711579747 0.897857308809943 AAGATAAAAGGAAGGGACGCCAGTGCCCTTGAGAAGCTGGACGAGGCAAACAAACATTCTCTCCTGGAGCCTCCAGAAAAGATAACGGCACTGCAGACAACTTGAGACCCATTTTGAACTTCTGACCTCCCAAACTCTGTGGTGTCACACCTCAGATAGGATAGGTTTCATCACTGAACCTCAGGCCTCTCACCCAAGGCTCCTGGTGCTCAACTTTAAAGCCTCTATCCTCACTCCTGACTGATAGATCAGGGAACCATTGATTTCTGATTCAGTACTTCAGACATCTGACCCCTGAAGCATGCTCAGTTGGTAGAGAATCCGCCAGCAACGCAGGAGACCTGGGTTTGATCCTTGGGTTGGGAAGATCCCCTGGAGGAGGGAAAGTCTACCCACTCCAGTATTCTGGCCTGGAGAATTC TCONS_00037104 TCONS_00037105 s 5' 468073 TCONS_00037104 TCONS_00037105 s 5' 468189 EMBV3_35459 AGTGTGATTCACTCATGTAAGTGGCACGGGTCAGGGAAAGTTATTTCCTACATTTCTGCC Gene GeneID:516420|USP46:XM_002688272:23_cdna UTR3_Alt 2 NULL GeneID:516420 6 GENE USP46 NULL ubiquitin specific peptidase 46 EMBV3_38322 GGCTGCTACACTCAATGGTGTACAAGATTTTGTGTGAACGTAAGTTTTCAACTCTTTTGG Gene BVT0102_386460 + 0 NULL GK000020.2:13989064-14008346 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37415 CAAGAAGTCCACCACGAATTCTGACCAAAGCTATTAAGCAAAAAAATATAAACCTTAAAG Variant GeneID:506983|ZC3H8:NM_001075291:35_cdna 150^478 3 EMBV3_21844 GeneID:506983 11 GENE ZC3H8 MGC140316 zinc finger CCCH-type containing 8 EMBV3_39322 GGCTACGAGAGCAGCGCCGAGCGCTGGAGCCCCAATGACGAGAGCGGCGCCAACGTGGAC Variant GeneID:614471|UBE2G2:NM_001076328:75_cdna 209^262 2 EMBV3_36312 GeneID:614471 1 GENE UBE2G2 MGC140569 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) EMBV3_26107 ACGGTGACGGTGGGGAACGGTGTGGGCTTCTTCTTGAGACCCTACAACTTCTTTGACCAG Gene GeneID:789307|SAO:NM_001130764:261_cdna Constitutive 0 NULL GeneID:789307 19 GENE SAO BSAO amine oxidase, copper containing 3 EMBV3_08958 GGTGCTGGTATTGGAACTTGGCTACGAGGGTGAGGAGGATGACACTAACTTTCCACGCTT Gene GeneID:497204|UBA7:NM_001012284:79_cdna Constitutive 0 NULL GeneID:497204 22 GENE UBA7 UBE1L ubiquitin-like modifier activating enzyme 7 EMBV3_18490 AAACAGCCTTCCCTCTGCCTTGGATTCTGAAGTGTTCCTGTTTGTCTCATCCCAGCCCTG Gene GeneID:618855|NUDT3:NM_001082466:173_cdna Constitutive 3 NULL GeneID:618855 23 GENE NUDT3 MGC148951 nudix (nucleoside diphosphate linked moiety X)-type motif 3 EMBV3_10775 CACAGTCTAGTTGCCAAGTGGAACATTCTTAAAAAGATCATTCAGAAGTTTAGCAGAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38908 TGGGTGGCCATCTTCCCCATTGTCACATGCTCCTCCCTCTGAACTTGTCAGTGTCCAAAT Gene BVT0101_026986 + 0 NULL GK000023.2:32968308-32984455 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26398 CCCATTGCTAACAGAAGCCAGCTGATGGGAGGTGGGGGTGAGTTTCCTTCCAGCATTCTA Gene GeneID:511510|REPIN1:NM_001075521:631_cdna Constitutive 0 NULL GeneID:511510 4 GENE REPIN1 MGC142574 replication initiator 1 EMBV3_18622 CCAAATCGGTCTGTTCTGGGGAGCTGGGGCGTTTATTACATCAGTGTTCATCCTCCATCC Gene GeneID:515620|TJAP1:XM_002697255:467_cdna Constitutive 1 NULL GeneID:515620 23 GENE TJAP1 NULL tight junction associated protein 1 (peripheral) EMBV3_28585 GAGTGTGGGACCCGGGAGATGCGAAGCCAGATTGTAGATGCCTTTTTCATTGGCCGCTAT Variant GeneID:616789|TMEM218:NM_001099159:35_cdna 69^371 1 EMBV3_28155 GeneID:616789 29 GENE TMEM218 MGC152448 transmembrane protein 218 EMBV3_13820 GAAGGTTCACCCGGCTTCGCACAATTGATAACATTTCACACTGTCCTTATTGTTCCGTTG Gene GeneID:508067|C7H19ORF52:NM_001099699:11_cdna Constitutive 0 NULL GeneID:508067 7 GENE C7H19ORF52 NULL chromosome 19 open reading frame 52 ortholog EMBV3_27950 CACACTGCCCGCCTGCTTCCTCAGCCTGCTGGCCTTCACCTCTGCTTGCTACTTCCAGAA Gene GeneID:280728|AVP:NM_176854:692_cdna Constitutive 0 NULL GeneID:280728 13 GENE AVP NULL arginine vasopressin EMBV3_17294 ATGCTGGTTTTGTGAATTTAACCCTGTCAAGCTGTGTGACCCTCATCACGACCACGTGCC Gene BVV0102_054548 + 0 NULL GK000020.2:71757899-71765788 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114213 TCONS_00114212 TCONS_00114211 1 XLOC_069230 Coding TCONS_00114212 XLOC_069230 Coding Coding SLC9A3 20:71723689-71761850 j TSS85231 4086 1 TCONS_00114212_5 835 18 0.893396226415094 3.65508499998408e-05 0.000142455800651166 0.000127322406032268 3.80917060983014e-15 7.65481080820625e-06 1.55104493219493e-10 8.56332272204038e-06 2.89500807835435e-06 4.04568787265702e-05 4.02788870584677e-05 5.60203000850892e-07 8.75036721883493e-07 0 1.15115836095456e-06 1.15729575955e-23 0.000646138707297384 0 1.22809275078657e-05 7.62023267129487e-05 8.27207254656443e-05 9.21263690480442e-05 2.89157930871307e-05 6.73551888070646e-06 0.000177634226859063 2.07552358230272e-05 1.43727473677171e-05 1.76096078875811e-08 4.70129612634574e-06 0 0 NM_001192154.1 sodium/hydrogen exchanger Bos taurus solute carrier family 9 (sodium/hydrogen exchanger), 0.0 5259 100.00 0.713411649534998 NM_004174.2 SLC9A3 Homo sapiens solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 (SLC9A3), transcript variant 1, 0.0 3112 87.01 0.623592755751346 TCONS_00114212_5 sp|P48764|SL9A3_HUMAN SL9A3_HUMAN Sodium/hydrogen exchanger 3; 0.0 1436 88.74 0.964071856287425 1 coding 1 0 0 0 -1.96829630752968 0.00212001398890557 0.0219757483257273 0.658672017042202 ATGTTGGGGCGCTGGGCTCCGGGTCCCGGATGGGGGGTCCTGCTGGCGCTGCTGCTGGCGCTGGGCGAGCTGCCGCGAGCGCGGGGCGTGGAAGAGGAGCCCGGCGACGCGCACGGGGGGACACAGGGCTTCCAGGTGGTCACCTTCAAATGGCACCACGTCCAGGACCCGTACATCATCGCGCTGTGGATCCTCGTGGCCAGCCTGGCCAAGATCGGCTTCCACCTGTCCCACAAGGTCACCAGTGTGGTCCCTGAGAGTGCCCTGCTCATCGTGCTGGGCCTGCTGCTGGGCGGCATTGTCCTGGCAGCCGACCACATCGCCTCCTTCTCACTCACGCCAACGGTGTTCTTCTTCTACCTGTTGCCGCCCATCGTGCTGGACGCCGGCTACTTCATGCCCAACCGGCTCTTCTTTGGCAACCTGGGCACCATCTTGCTGTACGCGGTCATCGGCACCGTGTGGAACGCGGCCACCACTGGGCTGTCCCTCTACGGTGTCTTCCTCAGTGGCCTGATGGGAGACCTGAACATCGGGCTATTGGACTTCCTCCTGTTCGGCAGCCTGATCGCCGCTGTGGACCCGGTGGCTGTGCTGGCCGTGTTTGAGGAGGTGCACGTCAACGAGGTGCTGTTCATCATCGTCTTTGGGGAGTCCCTGCTCAACGACGCTGTCACCGTGGTCCTGTACAACGTGTTTGAATCTTTTGTGACGCTGGGTGGTGACAAGGTGACCGGCGTGGATTGCGTGAAAGGAATAGTGTCCTTCTTCGTGGTGAGCCTGGGGGGCACGCTGGTGGGCATCGTGTTCGCCTTCCTGCTCTCCCTGGTGACACGCTTCACCAAGCACGTGCGCATCATCGAGCCTGGCTTTGTGTTTGTCCTCTCCTACCTGTCCTACCTCACGTCTGAGATGCTGTCCCTGTCGGCCATCCTGGCCATCACCTTCTGTGGCATCTGCTGTCAGAAGTACGTGAAGGCCAACATCTCAGAGCAGTCAGCCACCACCGTGCGCTACACCATGAAGATGCTGGCCAGTGGGGCCGAGACCATCATCTTCATGTTCCTGGGCATCTCGGCTGTGGACCCTCTCATCTGGAAGTGGAACACAGCCTTCGTGCTCCTGACACTGCTCTTCATCTCCGTGTACAGGGCCATAGGGGTCATCCTGCAGACCTGGATTCTGAATCGGTACCGGATGGTGCAGCTGGAGATCATAGACCAGGTGGTCATGTGCTATGGCGGCCTCCGAGGAGCTGTGGCCTATGCCCTGGTGGTCCTCCTGGACGAGAACAAGGTCAAGGAGAAGAACCTGTTTGTCAGCACCACCATCATTGTCATCTTCTTCACCGTCATCTTCCAGGGCCTGACCATCAAGCCCCTGGTGCAGTGGCTGAAGGTGAAGAGAAGTGAACAGCGAGACCCCAAGCTCAACGAGAAGCTGCACGGCCGGGCTTTCGACCACATCCTCTCGGCCATCGAGGACATATCAGGGCAAATTGGACACAATTATCTGAGAGATAAGTGGTCCAATTTTGATAGGAAATTCCTCAGCAAAATCCTCATGAGAAGGTCGGCTCAGAAGTCTCGAGATCGGATTCTGAACGTTTTCCACGAGCTCAACTTGAAGGATGCCATCAGCTACGTGGCCGAGGGAGAGCGCCGTGGGTCCCTGGCTTTCATCCGTTCCCCCAGCACAGACAACATGGTCAACGTGGACTTCAGCACCCCACGCCCCTCCACTGTGGAGGCCTCTGTCTCCTACCTCCTGAGGGAGAACGTCAGCGCTGTGCGCCTGGACATGCAGTCCCTGGAGCAGCGGCGGCAGAGCATCCGGGACGCGGAGGACATGATCACCCACCACACGCTGCAGCAGTACCTGTACAAGCCCCGGCAGGAGTACAAACATCTCTACAGCCGGCACGGGCTGACCGCAGATGAGGACGAGAAGCAGGACACCGAGATCTTCCACAGGACCATGCGGAAGCGCCTGGAGTCCTTCAAGTCGGCCAAGCTGGGGATCAACCCCCACAAGAAGGCCGCTAAGCTGCTCAAGAGGGACCGTGCCCAGAAGCGGAGAAACAGCAGCATTCCCAATGGGAAACTGCCGATAGTGAGCTCCCTGCAGGACTTCACCATTAAGGAGAAAGATTTGGAACTCTCAGACACTGAGGAAGCCCCCAACTATGATGATGAGATGAGTGGCGGGATCGAGTTCCTGGCAAACATCGCGCAGGACACAGCGACAGACTCCCCCTCAGGAATTGACAACCCTGCGTTTTCCCCGGAGGAGAGCCCGGGCGTCCTCTCTGGGGTGCCGCCCTGGCTGTGTCCCGGGGAGGCAGTGGTGCCCTCCCAGAGGGCCCGCCTGCAGATCCCCCACTCCCCCGGCAACTTCCACCGCCTGGCGCCCTTCCGCCTCAGCGGCAAGTCCGTGGACTCGTTCCTGCTGGCCGACGGCCCCGAGGAGCAGCCGCACGCCGCCCCGCCCGAGTCCACACACATGTGACACCGGCTCCGACGCGCCGCTGACCGGACGCTCGTCCCCGCCCGCCGTCGAGAAGCCCCCTCGCGCGCGCGCCTCCAGCCCGGCCCCGTCCAGCCCAGCCCCGGCCAGCCCCGTTCAGGCCCCGCCCACGCCGCGAAGCTCAGCGCCCGCGGCACCGCCCGAGCCCGATCCCTTTTTGAAGCCCCGCGCAGGGGGCGGGGCCGGAGCGCCGCGGGCTGCTGGGCGCACACGCGCGGTCGGCGGCGGCACGCCGCGTACACAGCCGGCGCTCGTTCCAGCGGCCCCGCGCGCGCCGCCGCCCCGCGCTGCTCAAGCTGGCGTCGCTGCCGCCGTCATGCCACGCGCCGCCGCACGCGCTGGAGCAGGAGGAGACGCCGCTGTGACTGCTGGCCCGCCCCCCACTCCGAGCCACTTTGACCCACTCTCTTGAGTACAAGAGCCAGCCTTCATCTGTCCCACAAACCTGGCGGAAGGCACATTCTCCATCCACTTCTGCAGGGGTGGTTCGTCCGGAGCAGGCGGGCTGGTCCAGGCGCCACAGCCCAGCCATCCAGCATCTCCAGCTGCCTTAACAACTCTCTTGGAGCGCTGGACCCAGATCTGGTTCCTCACTGCAGGGCCAGAGGTTGAGACAACCACTTGACACTGTAGACACTAAACTTCTGCCTGGCCGACCTCCCCTGGGCCAGCTGTGCCGTGGGCAGCAGGCACTGCCTGTTGTCAACGTGCACAGGCTGAGCAGTGTCCGAGGTTCCAGCGAGACATCCAGCCCGAGAGACTGTGTTTGGTCTGTGACACAGCGTTATAAACCGTAGTACTGTGGACACATTTCATAAATGAGAGTCTGAGCTGTTCTTGTCATTGTAAAACAGAATGTAAACAGTCTTATGAATGTATTTCCTTAGGAAAACTGTTGTAAAATTTTTTATTAGGAAGATTATTTATTTAATACTGAACTTTGGCCGACTTTGTGATATAAAGTACACAAATTTAGGAGTCATTCTCTCACTTCTACATTTTCTTGAAAATAATTTTAGTGCAGTGCTCAATGAACTATTGATTTCTATTGTCAGAGGAGATTTAATGGAGAAATTTCATTGAAGCTGGAATGGGAATGTATTTTACATCATGAGTGGTGAAAATTGTGAATGCTGGTTTTGTGAATTTAACCCTGTCAAGCTGTGTGACCCTCATCACGACCACGTGCCTTAAAGCACTGCCCGTGTGCTGTCAAACGTGTCTGGGCAGAGCCCACCCAGATCCTGCAGCAGCCTGATCAAGTCTATTAAAAATATTACAAGATACTTTGGGTGAAAACTCTGTTTACAAGTGAGATCATATCAAGAAGGTCTTGAGGGGCCGCCTCTCCTGCAGGCATAGTATTCTGGCACTAAAATTAACATGCATGCGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAGGGTCATGTGGATGCATCTGTGTGTGTGCGCGTAAGGCTCAGGGTTAGTGCAGAGGCTGAGAGCACAGGCTGTGTGTATGAGTGAGGGTCATGTGGAGGCATCTGTGTGCGTGTGCGTGAGGCTTAGGGT EMBV3_31852 CCTGGCTCCCTTTTATTTTTGTGCGCGATATTTAAGGTCGTCTGGATGGGGAAGCAACCT Gene GeneID:511512|RBM14:NM_001014901:601_cdna Constitutive 0 NULL GeneID:511512 29 GENE RBM14 NULL RNA binding motif protein 14 EMBV3_15039 ACTACTCCCTGGACGAGGAGAAGAAGGAGGACACGGAGAAGGGGTGCAACTCGGACCACT Gene GeneID:525109|KCNK10:XM_002691086:202_cdna Constitutive 0 NULL GeneID:525109 10 GENE KCNK10 NULL potassium channel, subfamily K, member 10 EMBV3_06712 TTTGATTGGACCTTTGAACAGACAGTGGAAGATTCTTACAGAAGCAGAGATTGACGCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10714 GCTAGTTCGTTTACCTTCATCACACACCGCTTCCTCTCTCAAACCTTCCCTGGCCATCTG Gene BVT0102_037986 - 0 NULL GK000019.2:63745799-63759529 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094931 1 XLOC_057594 NonCoding TCONS_00094931 XLOC_057594 NonCoding NonCoding - 19:63748636-63749542 - TSS70910 823 1 TCONS_00094931_1 143 0.215066828675577 2 0.092817679558011 1.65318244104269e-05 0.000451753185739128 0 0 0 0 0 0 0 0 0 1.73787723855729e-05 0 1.71469810372535e-05 0 0 0 0 0 3.49522994807726e-05 0.000512717386779933 0 0 0 3.36742967196489e-05 0 1.42385244538458e-05 0 0 0 0 noncoding 0 0 0 0 -0.189670522446882 0.141755752470016 -0.0703264030783025 0.169306880538766 ACGGTGTCTCAAGCCCGAAGCAGCGGTCTGCGGGGTGCTGACAGGCTCACTCCGGCCCGTGGCCCCAGGACGGCACGAGCTCGGGGGGACACACTTCGATGGCCAGGGAAGGTTTGAGAGAGGAAGCGGTGTGTGATGAAGGTAAACGAACTAGCTGCAGAGGAGAGGAGGTGCTGTGCTCCCTCACCCGTCTCTGCTTCCCGCCTCACAGCTCCCTCTTGAAAGGACCTCTGCTCACACTGCGTCCATCTGGACCATCCACGCTAAGCGCTCCCCACCCCCAACCCACCAAGGCCCTTGGCTCAGTCATGTATGCAGCGTCCCTTTTCCATACAAAGTATGGTTCCCCCGGTCAGGGTGTGGACATCTTGGGGACCATTGTCCTGTCTCATCCCCTGACTGCAGCATGTGTGCTGAGCCAGGACAGGACCTGCTTGTGGACAAAACCAGGGATGGGTTATGGACCTGCCCCTCAGGGCCTAGAGTCCAATATAGTCAGTGACTTTAAAGTAAAGCCAAGTGCTATGTGATTGAGGTTCCTTGGCCGCAGGTCACCTGCCCCCTTTCAGAAGCTGCTGGAGTCCTCCTTCCTCCCTAGGGCCCAGCGTGGACATGCCTCTAACCCCTCTGTGCAAAATCCATGCTTTCTCCTTGTGTGGCCTTGACACTGGGCTCATATTCCCAGTTCCTACCCCATTCTGCGTGGTTCCCCGCACCTGCCTTGGTTGGTGATATTTTCCTGAGTCACCCTGGCAGCTAGAACCTTCCCCACCCAGTCAAACGCTCCTCACAGTGCCCCTGGGGTGCACCGGCACATCAGACA TCONS_00094930 s 3' 2839 TCONS_00094930 s 3' 2839 EMBV3_38599 AACCAAGTACCCAAAATAGTTCCCGAGGACTTCGAGACCATGCTCAACAGCAACATCAAC Gene GeneID:513793|EIF3F:XM_002693065:376_cdna UTR3_Alt 3 NULL GeneID:513793 15 GENE EIF3F NULL eukaryotic translation initiation factor 3, subunit F EMBV3_28298 CCTGCTGTAAGGCCTACGAGTACATGGGCTTCATCATGGAAAGGGAGCAGTCATACAAGG Gene GeneID:540604|TTC21A:XM_002696921:449_cdna Constitutive 2 NULL GeneID:540604 22 GENE TTC21A NULL tetratricopeptide repeat domain 21A EMBV3_34467 AAGACTCTGAGAAAGTGGACGAGGACGAGGAAGAGAAGTCGCTCTTTGAGCAAGCCCTCA Gene GeneID:524150|HOXA2:NM_001075854:13_cdna Constitutive 0 NULL GeneID:524150 4 GENE HOXA2 MGC140797 homeobox A2 EMBV3_33260 AGCTTCTCCATCAAGTGGCAGACAATCTGGAAACAGTGAACGTAAACGAAAGGAACCACG Gene GeneID:524749|LOC524749:NM_001046275:76_cdna Constitutive 0 NULL GeneID:524749 10 GENE LOC524749 MGC137752 hypothetical protein LOC524749 EMBV3_26258 CAGGTGGACCTAACGTGGTGACTTGTGAACAATGTATGCTTTCATCCTGTTTGACCCCTC Gene BVV0102_099822 + 1 EMBV3_33693 GK000022.2:29396302-29987707 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248073 TCONS_00151325 TCONS_00151323 TCONS_00151324 2 XLOC_151482 XLOC_092086 Coding TCONS_00248073 XLOC_151482 Coding Coding LOC100847679 X:117095903-117098021 = TSS185592 2118 2 TCONS_00248073_3 223 0.991029272898961 1 0 0 0 0 0 0 0 0 0 3.72526876884818e-06 0.000104092642922766 4.87272784618559e-05 5.20537914894378e-05 4.74150544872645e-06 2.73918841187266e-05 1.0423934800077e-05 0.0053953792996879 0.0015514018579076 0.00221431099700138 0 0 1.43329668784965e-06 0.00185254093350888 0.00102331036571276 0.00341927395040215 0 0 0 0.000167039752547253 0.000163500846256606 0.000545965247964128 XR_139745.2 LOC100847679 PREDICTED: Bos taurus uncharacterized LOC100847679 (LOC100847679), 0.0 3820 100.00 0.999527856468366 TCONS_00248073_5 sp|P61567|ENK12_HUMAN ENK12_HUMAN HERV-K_1q22 provirus ancestral Env polyprotein; 3e-07 50.4 24.77 0.596685082872928 1 coding ATGTCTCAGCCCCTCGGATACCGGACTACACGGCTGCCGCAACCCCGCAAGAGGAAGGGGCCTCCTCTGCCTCCGCTTCCCCAGCCAGCATGGGAGACGCTGCCGACATCAAGACAATTGACTTCAGGAACCTTGAATGAGCAAGGAACAGATCCACCCACCAAACAGATGTCTCAGCTTCACATATGGGACACTACTCCCCCTGATTCCCTGCGCTGCAGAAACATCCCAGGCCGCCAAGCTCAGGTGACCTGGAATGCCCCCATACCCACTTGTGAACAAATAAAAACACTCTGTCACCAGGCACGAGGAATGACTTCCTTGCAGGGATCTCCAGATTCTCCTGAGAAAGTTTTTATTGCCATGCTTGCCTTGCTTTCCTGCCAGGTAAGCGCCTCTCCTATTTCAGGTAAGTATTGGGCATATCTCCCAGATCCTCCAACTTTCCAGGTTGTTTCCTGGAATAATGAGCCTATACGGCTCAACACAGACCAACCTCAGCTTTTGGGAGGATTCTATACTTCTTACACTAAAGATAAATATCCTATTAATTTTAATCATACTTTCTGGGGATTAATAGACGATCTTCCTGTTTGCTTTAACTTCCCCAGTAATCCAAAGAGTTTTATAACACCCACTAAAGAAGGTGCATCGGGGCCTCTACAAAAATAATTATAACATATTCCTCAAAAATAGATTCCCAGTCTTTACATCATTGGGTAGTTTGGGTATTAGTGGCCCGCTTGCCTGGGATCCGTGACCCTGCGCTTTACACCCCCTCCCGGTTATCCAAAGTGTTATAAGGTTGCTCCTTCAGATGAAGTGTGGAAGACCATAGATGGCCGTACTGGGTATCTGACTTGGACAACTTGTACTTATAAGTTCAAGGATTGATTATAGGATACCAGGCGGTGGGAATTATACTATTCAGGACTGGAGTAACCCGAATCCGGGTGAGGATCCATTGATCAAGATAACATTCAAGGCAGATTTGAGAATTGGAATAGGATTCCTCTTCCTTGGCCTACGCAAGCCACTAGATGGCATATTAACCAATTTGTTCCTCCTATGCTGTCTTATACAACTAAAAGCAAAACCTATTGGCAACCTGAGATTTGGAGAGCCCTTGCTGCTACTGCCCCCGTTTCTTCATCTCGCCCAGATAACGATTCCACTTATTCTGTTTTAGTTTGTTTACCCTCGCCTTATGTTTTCCTTTTTACTAATGACTCCAACAAACTTAATGTACGCATAAATTATTCAGGTGGACCTAACGTGGTAACTTGTGAACAATGTATGCTTTCATCCTGTTTGACCCCTCAATATAATATTTGCTCTTTTGTTGTGTTGCAACGCCCACCCTATCTCATTATACCTGTGACCGTGACCTCCCACTGGTATGACAATTACGGTCTCGCTGTGCTACAACAACTACAGGATTTAATGTGATCGCGGCGGTTTGTGGGCTTACTTATTTTAGGAATATCAGCTTTAATAGCAGCAATTAGTTCTGTTACTGCAGCAGCAATATCATTGACTCAACAAGTGCATACTGCCCAATATGTTGATACCATGTCTAAAAATGTTTCTTTAACTCTAGCAACTCAGGAAGCTACAGATAGGAAATTAGAGATGAGAGTAGATGCCTTAGAAGAGGCAATTATGCATACTGGGGCTGAGTTACAGGCTTTAAAGGTGAAGATGGCTTTGATATGCCAAGCGGATTACAAGTGGATATGCATGACATCTTTGACGGTAAATGAGACAGATTATGAGTGGGAAAAGATTAAAAATCATATCTCAGGTGTTTGGAATAGTTCTGATATTGGCCTGGACTTAGGGAAAATTCATAATCAAATACAGACCTTGGAACACTCTCGAATGGATTTTACCGTCACCGGTGGTGACTTTTTTCACACTTTCTCTAACTTTATTCCTGGAAAAAATATTCTGTCTAATATCCCTAGTTATGCTGTCATTGGTGCTCTAATCCTACTTCTCATAATTATTCTTCCTTGTATTGTCCGGATTCTTCAGCAGAGCATTTGGAAGCTCGCGACTGAGCTGCATCTGGCTGCTTTAAGAAATAAAAGGGGGAGATGTTGGAGGCCAGCGTGA EMBV3_31727 GGGACATTCTCTGCACCAACCTTACTCTGCCTCTGTTGCCTTCCAGAAACGCTGATGAGA Gene GeneID:522074|CD70:XM_002688908:196_cdna Constitutive 0 NULL GeneID:522074 7 GENE CD70 NULL CD70 molecule EMBV3_20954 AAACGCTACTACTTTTGCATGACACCAAGAGATTGAAGAGCGCCCTGGATGTGTTCCCGG Gene GeneID:513044|ERICH1:XM_002696824:612_cdna Constitutive 0 NULL GeneID:513044 21 GENE ERICH1 NULL glutamate-rich 1 EMBV3_28946 AACCTGTGTGACAAAGTGAGCGAAATGCAAAAACTGGACACGCAGGTCAAGCAGCTGGTC Gene GeneID:539818|MGC152360:NM_001102521:2_cdna Constitutive 0 NULL GeneID:539818 8 GENE MGC152360 NULL similar to ribophorin I EMBV3_35416 GAGAGTTGTCCGAAGCGCCAAGGATAAAAGCTATGGGAAGATAAAGAAGGGAAGAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40599 CTCTGTGAAGCCTCTTAACTTTGCAGGTACTCCGGAACAGAAACAGCTCGTCATTGGTGG Gene GeneID:618571|HEXB:XM_002696261:41_cdna Constitutive 0 NULL GeneID:618571 20 GENE HEXB MGC139178 hexosaminidase B (beta polypeptide) EMBV3_10237 AAAGGGTAACCTGTGTCCCCCCACCAGTGAGGCAAGGAAGTGTACAGTGCAAAGGAAGAA Gene GeneID:100337123|LOC100337123:XM_002690059:2_cdna Constitutive 0 NULL GeneID:100337123 9 GENE LOC100337123 NULL R-spondin 3-like EMBV3_14043 TTGTTGTTACATGTTTTACTACATGTATAACTATCAAAATTACTTGCTCTTGATACAGTA Gene GeneID:790879|ZNF260:XM_002694953:86_cdna Constitutive 1 NULL GeneID:790879 18 GENE ZNF260 NULL zinc finger protein 260 EMBV3_11035 CTGCTGATCGCTAGCATTGTGAATATGGGATTAAGTCCTCCTGGCTATAATGCATGGATG Gene GeneID:281952|SLC6A15:NM_181023:26_cdna UTR3_Alt 2 NULL GeneID:281952 5 GENE SLC6A15 NTT73 solute carrier family 6 (neutral amino acid transporter), member 15 EMBV3_43433 CCAGAACCTGTGTAAACTGGATATTGCTTAAAATCTGTATCACTGCCATGTTGGAAACCC Gene GeneID:533569|MGC142908:NM_001083721:18_cdna UTR3_Alt 3 NULL GeneID:533569 X GENE MGC142908 NULL hypothetical LOC533569 EMBV3_20647 GGTATCTATGGGGATGAAGTACCTGGAAGAGAAAAACTTTGTGCATCGTGACCTGGCGGC Gene GeneID:504509|ZAP70:XM_002691140:154_cdna UTR3_Alt 2 NULL GeneID:504509 11 GENE ZAP70 NULL zeta-chain (TCR) associated protein kinase 70kDa EMBV3_08996 CTAAAACAAGCTGATCTTTACATTTCTGAGGCTGTTGTGGATTCTGTTTTGGCAGTTAGG Variant GeneID:538090|CCT6B:NM_001034642:277_cdna 386^559 3 EMBV3_13849 GeneID:538090 19 GENE CCT6B MGC127900 MGC140065 chaperonin containing TCP1, subunit 6B (zeta 2) EMBV3_42505 CTTATGAACCTATAAAAGGACCTTGAAGCACTTAAAGATTCTGAAGAAACTGAATTATGA Gene GeneID:515564|ZNF197:XM_002696932:483_cdna Constitutive 0 NULL GeneID:515564 22 GENE ZNF197 NULL zinc finger protein 197 EMBV3_03802 ATCCACTCTGTGTGCCAAAACCAGTAATGCCTTTCACGGCCCTTTAGTCCAGAGAAGTTC Gene GeneID:537391|DDAH1:NM_001102201:77_cdna UTR3_Alt 2 NULL GeneID:537391 3 GENE DDAH1 MGC165853 dimethylarginine dimethylaminohydrolase 1 EMBV3_06050 TCATGTATCAGCAACCTTCACCAGCGAGGAGTGCATGGGCCCTTCTAAGAGGGTTCTTTT Gene BVV0102_142754 + 0 NULL GK000004.2:30839425-31017032 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183528 TCONS_00183529 TCONS_00183530 TCONS_00183527 TCONS_00183531 1 XLOC_111169 Coding TCONS_00183527 XLOC_111169 Coding Coding RAPGEF5 4:31012638-31212740 j TSS136919 6640 1 TCONS_00183527_4 729 0.0405120481927711 23 0.966931699491757 5.01763713879206e-05 1.37721993562381e-111 3.4388935463503e-05 3.46058578428071e-122 5.66197199665211e-05 1.01068702305379e-28 0 9.44114018989694e-05 1.16755886614599e-06 7.41112294506871e-05 5.3884230316241e-05 3.94594949849972e-05 2.69563259062092e-26 8.43673003092962e-93 2.60754452024606e-07 0.00347316338892237 6.62290560555624e-16 0.00109954623154227 4.56236718322948e-10 3.66967601978081e-05 5.52408375285935e-200 0.00155697044280487 2.71743991111919e-09 0.00118811794306981 1.44660599853235e-08 1.95336114130929e-06 3.84951480919439e-05 0.000115953838502685 0.000141640937889704 0.000186871703629645 XM_005205289.1 RAPGEF5 PREDICTED: Bos taurus Rap guanine nucleotide exchange factor (GEF) 5 (RAPGEF5), transcript variant X2, mRNA. 0.0 1.158e+04 99.91 0.968072289156626 NM_012294.3 RAPGEF5 Homo sapiens Rap guanine nucleotide exchange factor (GEF) 5 (RAPGEF5), mRNA. 0.0 3763 79.21 0.644277108433735 TCONS_00183527_4 sp|Q8C0Q9|RPGF5_MOUSE RPGF5_MOUSE Rap guanine nucleotide exchange factor 5; 0.0 1373 90.42 0.998628257887517 2 coding 0 0 0 0 -0.0851112953947868 0.573115399644044 -0.0211446994268881 0.686295170138275 GGTCAGAACTGGTAGACTGGCTTCTGGAGCACTGCCCTTTCGTCCAGTGCAGATCTATGGCCATAGGGGTCTGGCAGCTCCTACTGGACATGGGAATCCTGTCGTCAGTGGACCAGCATTTATACTTTCAGGACACCTATGTTTTCTACCAGTTTTCATCTGAGGAGTGTAGCTACTTGTACTGTGAGTTTGAGAGAGAAGAGGAGTGGCAGAACGGCGTCAGACTCTTACTGCAGCTTGTGCCTCTCATTCCCAGCCGCGCTGGCATCTGTGAACTATCTCATCAGAAAATTGAAGACTCAGAAGAGAGCAGTGATGAAATTCTTGCCCGTCTAACGTCTGCGGTGCAGAGAGAGCTAGCAGCTGTTATTGCTTTGAAAGCAAGGAAGTCTGCACTTGCACAAGATGAAGAAAACAGTGACAAACACGTGACTGTGACAGAGGCTGAAGCTGCTGCAGATCCTCAGGCCGGCATGATGTGCAAACTTCAGGAGAGAGATGATATCGGGCGAATTGAACTGGTCCAGAAGCTGGCAAGAGAAAGCTGTCAGTTTTTGCAGACGGACAAAAAAGAACAGGAGAAGTCTGAACACGATGATGAAGTGACGACGGTTGAGGTGAAAGAGCAGGACCAGAATGTCCTGGTGCTGAAGAAAGTGCAGAGCTGCGGCCCAGCCCCGCAGGCGGGGAGCGCCGAGAGCGATTGGAGATACGTCGTCGTGTCCGGGACCCCGGAGAAGATCTTGGAGCATCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGAGACTCTCCTTGATGACTTCCTTCTCACGTACACAGTCTTCATGACAACTGACGACTTGTGCCAGGCGCTGTTGAGGCACTATTCTGCTAAGAAGTATCAAGGCAAAGAAGAAAATTCAGATGTTCCTTGTCGGAAACGGAAGGTCTTGCATCTTGTTTCCCAGTGGATTGCTCTATACAAAGACTGGTTACATGAAGATGAACATTCAAAAATGTTTTTAAAGACCATATACAGGAATGTGCTGGATGATGTCTATGAATACCCAATACTTGAAAAAGAGCTGAAAGAATTTCAGAAGATACTTGGAATGCACCGTCGTCACACTGTAGATGAATACTCACCGCAAAGGAAGAATAAAGCCCTTTTCCACCAATTCAGTCTGAAGGAGAACTGGCTGCAGCACAGAGGAACTGTGACAGAAAGTGAGGAAATTTTCTGCCACGTGTACATAACGGAGCACTCATACGTCAGCGTGAAGGCCACTGTTTCCAGTACAGCCCAAGAGATCCTGAGGGTTGTGGCAGAAAAGATCCAACATGCGGAAGATGATCTGGCTCTGGTAGCCGTCACCTTCTCTGGCGAAAAGCATGAGCTTCAGCCAAACAACTTGGCCATCTCCAAATCCCTTGATGCCTCTGGTCGGATATATGTCTACCGGAAAGACCTGGCCGACACTTTGAATCCGTTTGCAGAAAATGAGGAATCACAGCAAAGGTCGATCAGGATTTTGGGAATGAACACTTGGGATCTTGCTCTGGAATTAATGAATTTTGATTGGAGCCTTTTCAGTTCAATTCACGAGCAAGAGCTGATCTACTTCACGTTCAGCAGACAGGGAAGCGGGGAGCACACGGCGAACCTGAGCCTGCTGCTCCAGAGATGCAATGAGGTCCAGCTCTGGGTGGCCACGGAGATTCTGCTCTGCAGCCCACTGGGCAAGCGAGTGCAGCTGGTGAAAAAATTCATCAAAATTGCCGCTCACTGCAAAGCCCAGAGAAACCTGAACTCCTTCTTTGCTATCGTGATGGGTCTCAACACTGCTTCTGTGAGCCGGCTATCTCAGACCTGGGAGAAAATCCCTGGGAAGTTTAAGAAACTTTTCTCTGAACTTGAAAGTTTAACAGATCCATCCCTGAATCACAAAGCCTACCGAGACGCATTCAAGAAAATGAAGCCACCCAAAATCCCCTTCATGCCGTTATTGCTTAAAGATGTAACGTTCATTCATGAGGGAAATAAAACATTTCTGGATAATCTTGTCAACTTTGAAAAACTGCACATGATCGCCGACACTGTCCGGACCCTTAGACACTGCAGGACCAACCAGTTTGGTGACATATCTCCAAAAGAGCACCCGGAGTTAAAGTCGTACGTGCATCACCTGTACGTCATTGACAGCCAGCAAGCCCTATTTGAGCTCTCGCACAGGATCGAGCCGCGGGTATGAGCCTCACCGCGCACTGCCTCGCCTCCCCCGGAACCGCAGTGCCAAGCGTGTTATGTTCCTGCGAGAAAAGTTGCTGAGTTTTATCAGCGTATCACAATAAGACGCACACAGCAAAGCCAGCCAGAGCGTGCTCAGGAAGTGATGTCAGCCACCTGAGTTGGGGAGAGGCTGCTATCGAAAGGAGACGGCAGAAGAGGAGGCAGAAACTTTCTCGAAATGAGAAGTCTGGCTTTTTAGGATCACCGTGTTGAGCCAATCCATTGTTCACTTTGCGACGTGCCAGCGTCAAGGCAGGAGGCCGCCCCTTGTCATGCGGTGACCAGACAGCTTGGTTAGAGTGCACAGGAGCCAGCAGGGAGCTTTACTTGGCCTGGCAGTAGATGGCTGTGTATAGGCTGTCAGAGTAGGAGCTCGTCTGAACACTCAAAGACAGTGATGGCATCTCTAGGTTTCTATGGAGATGGACTGGTCTCCATCGTTACAAACTAGGACATCACCAAAAGCTACTTGTGTCTAAGGAGGCAGTGAGCACTGGCAGCTGCCACCCCTGCTCTAATCTCCAGAAGAGAAATGTCGAGGCATGCATTTCTTAGCAGCTCAGTCACTTAGTGCTGTATGCTTGCGGGTAAAATTCATTTCTGCACAACTTGATTTACTTCTGTAAGTGAGTTAGACTAAGTTGCTTTGCCAATACGGAAAAATAGTCATCTTTAAGAACCTGACTCACTGTTTACTTTCTGGGGATTTTCTTTACATGTGCAGACAGGCTCTCATCTCTCCTCAAATACAGTACAATTTTTGACAAAAGCACAGTGCCTGCCACGTCACGGGCACTCTGTAACTGTTTCTGGGGGTGACAGAGTCACAAAAGTCCATCATCTCGCGCCTGGCAGTGCCCTTGTGTTCTCACGCTTCGGCCACCTCGTGCCTACACTCTGGAATGAGAACCACCAGTACAGGGGGTGTACATGGGATTTGATGTGTGGACCGCTTAGCGCTCCCTGGAGAAGAAGAAGGGATATAGAACAGTGGCAGTGGCCTGTCTTTCAGCAGATGGAAAGAGCCCCCAGAGATCCAAATATCTGATTTATGTTGGACACTTAGAAGTCCTGTAGCCCACCTCCCAACCAAGGCAGGGGGCCTTTCTATAATTTGCCTCTTTTTTCTTCTCAAAGTCTCAGAGTCTTTTAGATCTCTTTTTATTTCCATTTTTAGAGATTGGGGCTCCTACGGTAAATAAGACCTCTGGCTGTTCTCACGAACTGGTTTGCCTCAACCTTCAAATGAACAAAAAAGACCTGTGGGAAACAATATTGAAATCCATCCCTGCCAGCCAGATCCTTGTCACTTCGCTTAAATACAAAGTTCCCGCTTCCCATATTAGGTCCTTTCATTTCCACACATGTGGCCCTGGAGCCCCTCTCGCCAGCCCTGCCAGCTCCTCTCCTCGGCGCCTGTACAGATCCGCTTCCTCCTCTCATCAGCGCGTCAGCACTGAGACGTGTCCAGTGTTGTTCCCTGGACTTGGCAACCACGCTGGCCTGGAGAGTTGACTCGAAAGAACCGCATGGAGCAAATTTGGGAAGGACTTTGAGAGTCTGTCCCATTGCGTCCTTCAGTCCTGAAAATGAACAGGGCTTGACAGAAAGGCACCATCCTGGGCTGGTCCACTCAGAGAAATGCCCCAGCCAGCTGGGAATGGAATGAAACTCACTGGAAGCAATCAGAACCATCAGAACCAGGGAAAAGCGATTTCTCTCGAGGCTGATCAAACAGTGATGCGCTCCCCTTGGCGATTACTGGTGACGGTGTGGGCTGACAGCACCCGTGTGCTTTGGTCTTTTCTCTATTCTTAGGGAGTAGCATTTAGCCATTCTGATCCTGTGAGGCTGTTTTGACATCATCTCTGTGTTTTAGAGTTTGCGTGATTATTCGCATTAGATTTACACTGCTCCATCTAGAACTACTGCAGTTGCCCCAGTGGAGAGCTATTTCAACACAGCACCTGCTGCTTGGACCTCAGCTCAGATATGTGCATGGCCAAACAAATCCACATGTACACCGGGCCTGAACAGATTCTGAGGGTGCATTTAGTTTACCCGCATGTGGTATGAGTAGAAACAGACTGGGAAGAGAAGGGTGCTCGCCTTCTGTTTCCCCCAGTCATGGGGCGCACGTGGCTCTCGGGCTCTCCCCCAGTCATGGGGCTCGTGTGGCTCTCGGGGTCTCCCCCAGTCATGGGGCGCACATGGCTCTCAGGGCAGCAAAAGGAAAGGAGGATTTTGTTCTGTTTAGATGTGCTTTTCCATCCCCATCTTCTGAAAGTCATAATCTCCAAATCTTCTGAAATTTAACAACAGTCTCCAGAGGTTTCTCTGGCAGCAGGTCTCAGAAATTTCAGAAGCACTGAGAAGGCCTGTATCTGGAACTGAAGGATTCAAGCAGGATCATGGGGACCAGATCAAGCTTAACATGGGACTCTTTCTAACAAGTCTGGAGTTGTCTCAGTGAGCAGGCTGCACAGAATTTAAGCTGGGTCCCTGTTAATAGGGGTAGGTCATATTCCCTCACCAGGAAGATGTATAAGCTCCTTTCCAACTCTTAGATTTTCACAGTTGCATAAAATCTCCGTTCACTCTGAAACATCTCATGTATCAGCAACCTTCACCAGCGAGGAGTGCATGGGCCCTTCTAAGAGGGTTCTTTTTGCTACAGCACAACTTTCAGACAGTCCTGTGTGTCTTTGGATTTGTCAGCATTCCAGCAAACCAGCCCTCTTTAGAAATTAGCAAAGGATAGTGTGCTCTTTGATCAGTTGTGTCTGACTCTTTGTGACCCCATGAACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAGTACTGGACTGGGTAGCGCCATTCCCTTCTCTAGGATCTTCCCAAACCAGGGGCTGAACCCAGGTCTCCTGCATTACAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCCCAGCAACAGTTCCCAATAGGCAAAATCATAACCATTCCAAAAATATTAAATTTTTTCATACACATTTGCAGATCCTCCAAAGACCACAGTTTTTTAAATTCACTGTTACAATCTGTACAATTGCTGAATGGTTGTAGTGATACTTCTTATCACCTACATTTACTTTATTCTGATATCTCAGAATAAATTTATTGTCTTAGACCCCTATCCACAAGCAAGTTGGGTAGAGCATACCTGAAATTCCGAGGCATGAGGACAAAGTAAAAGCCCACCCCTCTCAATTTGTGGGGAGAAGTGTACTCATCTCTGCGTAGGGAGAAGCAGTAGTGTGAAAGAGAAGGCGTTGGTGGCTTTCAATCCCTGGAGCCTGGCCTTGACGGCTGCCCTGATCCCCGCCCTGTGGTTTTGTTGTGGGCATCACTCACCACAGATCCCAAGTGTCCCTGGGTGGCACAGGGAATCCGAACTTCTCAGAAACTAGGGGCAGATCAGATCCACTGTGGTGGTCTAACACAGAGTTTCTTTTAAATGCGGTCTAATGCGGAGTTTCTTTTAAATGCTTCAAAGACGTGTCCTTAAAATTTCAGCCTGCTTATTAACCAGTGAGCCATTGTGCTTAGAACCAGTGCTGGAAAAATGTTTTTTAAAATTGCCAAAAAGTTAAATGAAAATGTACTATATAAAGCAAAGCTGTATATACTAAACATTTTTTAGCAGAGTACTATTTATTTGCATAGCCTATTTATTGTATTCGTATTACACTGTTTATTAAAGACTGGGATGAAGTCAACCAGAAGCAAGGACTCTTGAGTGCTGTGACCTTGTCAGCTTGCGTTAACAGTTAGAAGATAGAAAACCTGCAATCAGGGCGCCTACCTAACTTCTCAGGGACTACACTTTGTAGTTTTCCACCATTAGAAGAGCTGGTAAATATGAAACACTTGTGGAATTACCAGAATTGCCATTAACAGTATTTTCTTTCTCATATCTCATGCTTTCTGCTTCTGTACATATGACTGTGCTGTGTATTTATCAAAGCTAGTAAGCAATAATTTATATGTAAAAATGGCCAAGCAATATAAGGTGAAAACTTACGTAAGTTACTGTTACCTTGTATTTTCAAGTGTTTTTTTAAAAAACTGCTTTTCCAAATATAAGATTATGTTAAAGATACACTATTCACGCCTCAGAACGTCTTGCTTTGTGATGTTTGGGGACTCTATAGCCAGTATTCTGGTACCATATTATGCTCAGATGGAAACTCAGGAATCGTTTACCCAGAGTGTGCTACAGGTAGGTGAGGAGATTCTCAGGTGGCCTGTGGAAGCCAAAATCATTTATGGAGTTATTGCAGAACCTAAACATGCTGTGTTGGAAATCGCGTCCTTT EMBV3_39838 AGCATCGCAGCTCCCACCGCCTCCAAAATACTCACACACGCCAAATCTAGGCTTTCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35655 TGTTTCCACAGAAGCACCGCCTATCATATTTGCCTCCGTTTGTTGGGCAGTTTGTTTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00983 CCCCCCACTCTAGAGCCAGAGAAGACAATGACTGTAGAGGAGCGCCGGACTGTGGTGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06015 TATACGCCACCTGTTCCAAGAGATGTGCTCCTTCCCCATAAGCCAGACCCCGAAGTCTTT Gene BVT0102_161167 + 0 NULL GK000001.2:45521373-45667460 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003241 TCONS_00003226 TCONS_00003239 TCONS_00003219 TCONS_00003229 TCONS_00003230 TCONS_00003214 TCONS_00003225 TCONS_00003237 TCONS_00003223 TCONS_00003212 TCONS_00003235 TCONS_00003213 TCONS_00003228 TCONS_00003232 TCONS_00003240 TCONS_00003238 TCONS_00003221 TCONS_00003234 TCONS_00003218 TCONS_00003215 TCONS_00003220 TCONS_00003233 TCONS_00003242 TCONS_00003222 TCONS_00003231 TCONS_00003236 TCONS_00003216 TCONS_00003224 TCONS_00003227 TCONS_00003217 TCONS_00003243 1 XLOC_000812 Coding TCONS_00003220 XLOC_000812 Coding Coding ABI3BP 1:45521486-45765195 j TSS1672 4559 1 TCONS_00003220_4 1071 34 0.981432698146963 0.0007526279518271 0.000192674380846984 0.000427294161013984 3.9089588048626e-28 1.02547030460551e-49 7.45267376898403e-151 8.41455416924233e-17 1.463380686656e-24 1.80911848063267e-12 5.2533409537036e-05 3.97417383691672e-29 1.61013391681475e-05 1.97525428488073e-17 0.000270098200877597 6.86649853294849e-13 1.89907633732053e-56 8.28616559817008e-183 2.99289882530748e-123 3.79876571310228e-28 2.76046703129049e-11 9.79405313875399e-05 4.89739232276271e-68 8.53051789746572e-17 7.2405235903806e-102 2.76531344963786e-12 0.000619891170198269 7.03550997831065e-18 5.4807481655409e-05 4.30889954507823e-05 0 XM_005196039.1 ABI3BP PREDICTED: Bos taurus ABI family, member 3 (NESH) binding protein (ABI3BP), transcript variant X2, mRNA. 0.0 5386 98.20 0.670322439131388 XM_005247316.1 ABI3BP PREDICTED: Homo sapiens ABI family, member 3 (NESH) binding protein (ABI3BP), transcript variant X36, mRNA. 0.0 3173 84.40 0.625137091467427 TCONS_00003220_4 sp|Q7Z7G0|TARSH_HUMAN TARSH_HUMAN Target of Nesh-SH3; 0.0 1526 75.58 0.965452847805789 1 coding 0 0 0 0 -0.162637750718985 0.417826862856674 0.0395482613257389 0.597580169278592 CCTCTGCTCCTGCTCTTCTGGCTGCCTGAGAATGCCGTTCTGCCCTGGGTCCTCACCCACATGCACTCACAGTCTAACTGATTGCTCCCCATCCTTTGAACTTGTTGCCTCCTCAGGTCATACCAGTCGTGGAGTTATGGAAGGTAAAAGGCCAAACCTGAAGGTCCACATCAATACCACAAGTGACTCCATCTTCTTGAAGTTCCTGCGTCCAAGTCCTAATGTAAAACTGGAAGGTTTTCTCCTGGGATATGGCAGTAACTTATCACCAAACCAGTACTTCCCTCTTCCTGCCGAAGGGAAATACACTGAGGCCATAGTCGATGCTGAGCCTAAATATCTGATCGTCGTTCGGCCCGCTCCTCCCCCCAGTCAAAAGAAGTCGTGCTCAGGTAAAAAACGAGCTCGTAAACCTCTCCAGCTGGTAGTTGGCACTCTGTCACCAAGCTCAGTCTTCCTGTCCTGGGGCTTCCTCATCAACCCTCACCATGATTGGACATTGCCAAGTCAGTGTCCCAATGACAGATACTACACAATTCGCTATAGAGAAAAGGATAAGGAAAAGAAATGGATTTTTCAGCTCTGTCCAGCCACTGAAACAATTGTGGAAAATCTAAAGCCTGACACAGTCTATGAATTCGGAGTGAAAGACAATGTAGAAGGCGGAATTTGGAGTAAGATTTTTAATCACAAGACTATTGTTGGAAGTAACAAAGTAAATGGGAAAATCCAAAGTACCTATGACCAAGTCCACTCTGTGCCAGCATATGTCCCAAGAAAGCTAATCCCAGTAACAATCATCAAGCAAGTGATTCAGAATGTTACACACAGGGCCTCAACTAAATCTCCAGATAAGACCCCCTATGGAGGAACAATACTGGTCCACCTTGTTATCCCAGGCCTTAATGAAACCACCGTCAAACTTCCCACTTCCATAATGTTCGAGATTTCAGAGGCAATCAAGACACAGTTAGCTAAGAATGAAACCTTGGCATTGCCTGCTGAATCTAAAACACCAGAGGTAGAAAAAATTCCAGCACTGCCCATAACAGTGACTCCTGAATCAGTTCCAAGAACCACTAAGCCCACTGTGTCTAGTGCATTAGACATTTCAGAAACAACACTGGTTCTCAGGGGAAGGACCCCCGGAACATCACAAACTATTTTAATACCTAGATTTGAATTGCCACTGAGCACTCTAGCTCCGAAAAGGCTTCCAGAATTTCCTCAGGCAAAAACACCTTTCCCTTTTGAGAAACCTGGGGGCGCCTTGGCTTCAAGTGAAAAGCCAGGGATTGTGCCTACAAGTAAAATATCTGAAGATTCCAAAATTCTACTGCCTCAAACTGCTCCAACAACAACAACAACAACAAAGAGACCCCGTGGTCCACGTCCCAAACCTAAAACCACGCCCCATCCAGAAGCACCTCAGACTAAACTGGCTCCTAAAACATCAAAACGGACCCGTCGTCCGCGTCCCAAACTTAAAACTACAACAACTCCTGAGGCACCTCAAACCAAACCGGCTTCCAAGCAGATACCACGAACTCCTCCCAAACCAAAAACATCTCCACATCCAAGAATCCCACAAACACAATCAGCTCCTAAGGTATTCCAGCGTGTTACTTTGAAGCCAAAGACATCACCAAGTCCAGAAGTGTCCTATACGCCACCTGTTCCAAGAGATGTGCTCCTTCCCCATAAGCCAGACCCCGAAGTCTCTCAGAGCGAACCTGCTCCTTTAGAGACACGAGGCAGCCCTTTGATTCCTATGATTTCACCAAGTACTAGTCAAGAGGAACTACAAACCACTCTTGCAGCAACAGACCAGTCTACCCAAGAACTCTTCACAACAAAGGTTCCACAAACAACTGAATTGGCAAAGACAACTCAGGCACCACACAGATTATATACTACTACTATGAGGCCCAGAACACCTGACAAACCACACATCAGACCTGTTCTGAATAAGACAACTACAAGACCTAGTAGACCCAGACCCAGTGGGACACCCAGAGGGAATGGACTAGGAGCAGGGGTCAAGCAAGTCCCACTGCCATCTGGTACTGGTAGAAATGTATCAATGGATTCGTCTCACCCCACAAAAAAACCAGCCATAATCCCAGGTACTCGTCGCCCACCCTTGCCACCCAGACCCATGCCCCCACGAAGAAAGCCTTTACCACCCAACAATGTCACCGGAAAGCCAGGAAGTGCAGGAATCATTTCATCAGACCGAGTAACTTCCCCACCCTTGAGGGCAACACTCATACCTACAGAAGCCCCCTTGGAGAGAATGGAGACAGATAAAAAGCAACCAACAGCTCCTGCCTCAGGAGAAGATCTTGATAACATCACTGACTTTAGCTCAAGTCCAACAAGAGAAACTGATCCTCTTGGGAAGCCCAGATTCAAAGGTCCTCACGTGCGGTATATCCAAAAGCCTGACAACAGCCCCTGCTCCATCACCGACTCTGTCAAGAGATTCCCCAAAGAGGAGGCCACAGAGGGGAATGCCACCAGTCCACCGCAGAACCCACCTACCAACCTCACTGTGGTCACTGTGGAAGGGTGTCCCTCCTTTGTCATCTTGGACTGGGATAAGCCACTCAATGACACTGTCACTGAATATGAAGTTATATCCAGAGAAAATGGGTCATTCAGTGGGAAGAACAAGTCCATTCAAACAACAAATCAAACCTTCTCCACAGTAGAAAACCTAAAACCAGACACAAGCTATGAATTCCAGGTGAAACCCATAAACCCACTTGGTGAAGGGCCACCCAGCAACACAGTGGCATTCAGTACTGAATCAGCTGACCCAAGAGTGAGTGAGCCAGTTTCTGCGGGAAGAGATGCCATATGGACCGAAAGACCCTTTAACTCAGACTCTTACTCAGAATGTAAGGGCAAACAGTATGTCAAAAGGACATGGTATAAGAAGTTTGTAGGGGTGCAGCTGTGCAACTCTCTCAGATACAAGATTTACCTGAGTGACTCCCTCACAGGAAAATTTTATAACATAGGCGATCAGAGAGGCCACGGGGAAGATCACTGCCAGTTTGTGGACTCATTTTTAGATGGACGCACAGGACAGCAACTCTCTTCTGACCAGTTGCCCACCAAAGAAGGCTATTTCAGAGCAGTTCGTCAGGAACCAGTCCAATTTGGAGAAATCGGTGGTCACACTCAAATCAATTATGTCCAGTGGTATGAATGTGGGACCACAATTCCTGGAAAATGGTAGATGCTGCAGTCACATTCAAAAGTGCCTTCTGTTTCATCGTTTCAAAAAATAATTGGAAACAGTATGGTATTTGCCACATGCATTTAAAGCTCTTTTGTTTACTATGTATAAAATTTTAAAATCTAATAGCAATATTAGATGTTTATTAGAAAGATTGCTAAGAATATTTATCAGGTTTTACAAAGTCATTTTAAGAAAGCAAGATATTGATATTAACAGAATAACATTTTTGGGGAAGCTGGCTCCCTATTCATGGTATTTTAAGAGATCATTTGTATATTATTTATCACACTGTTGTAATGATGTTCTGAGATACTTTTATAACAAAATTAACATCAAAAAACTAATATACTTTAAAAAAATATTTACATTTATTGTGTACTCTTCCTACTGTTAATTCCATAAATCTCTACTTGGCTTAACTTATTAGATCAAATTATCATCAACATATTATATCTGGGGAGAAAAGGTCCTAATATTCACATGTTTATTTAAACTTCAACTTTTTAGTAACAGTTGAGTAACTTTTGAAGCATTTAAATAGCCATTCATGCAAATATACATTTCATTAATTATCTACAAATTATTGCAAAGGTTGTTTGAATCAGTAAATTTCAGTTGAAAATGGAATTGAAAATTTGATATATTATTTCAAAAATACGTATTTTGTGCTTTGTCTACCCATAAGTATGCTACAATGTCTGAATGTTCTTTGTCAAACTATCCCTTTAAGCAGTTGTGTTCATACTGTTTTTAATTCTAATCAAGCTGTATCCAAAGACTGTAGCAAAGTCTAAGCATAAAAGGATAATCCATGATGAGAAGCCTACCATTTTATGATATTTACTCTATTTTTACACAGAAGATCTCTAGGGAATGAATGTATCAGAGGCTGTTTTCTTAATTCTAACAACCTGTAATGAAAATCTGACTTATTTTTATTTAAAACAGTATTATTCTCCTTCATTGGGGAGGAAGACAGGAATGCTGCATTGGTGCCCTCATTCTTAAAGGACCTTTCTGTGCTTACCTTTGAACATGCTTCAGTTTTATCAATACTTCATTTTATATTTTTCAAACAGTATAAACTCTGCAATAAAGAGATGTAGTTTTTTTTAAGACTGAGTTCTTCATTTCTAAATGGTTGATTTCTATAAGGAAACTCACAGGTTGTTTAGAATCTACCAAGCTCCCTTTCATCTTTTAATATTGTATCTACTGTGTTTATATATAATGCTAGTCTTGATCTATTTTAAAGTTTTGTCATTTAAAACCAAAATCAGGACAGAATACAACAGCACTGTGCTTCTTT EMBV3_08751 TGCCAAAGATATTTCTAGTTACAGCAAGCACACCGCAGCATGGTCACACCACGTCCAGAC Gene GeneID:534237|RAB40B:NM_001102166:111_cdna Constitutive 0 NULL GeneID:534237 19 GENE RAB40B MGC165968 RAB40B, member RAS oncogene family EMBV3_10252 ACTAGCAGGCAGTTGTGGTGAGAAGGTCAGGGAGTGGCTGGTGATGAAGCTGAAAGTTAG Gene BVT0102_261539 - 0 NULL GK000015.2:39948728-40234270 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24283 AAGGCTACTCTGGCTCGGACATTAAGCTAGTCTGCAGGGAAGCAGCTATGCGGCCTGTGA Gene GeneID:514354|KATNAL2:XM_002697759:286_cdna Constitutive 0 NULL GeneID:514354 24 GENE KATNAL2 NULL katanin p60 subunit A-like 2 EMBV3_00941 ATCAGAGAGAGATCATTTTTCCCTCAGAATTACTCCTCACTGTAGTCTGTTACTCAGTCC Gene BVT0101_033432 + 0 NULL GK000008.2:22153483-22223215 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18799 GGGCAGTGATGCCACATACGAACAAGGTTACAACAAGGACAAGATTCCCATCAGTCATCC Gene GeneID:100336993|LOC100336993:XM_002693884:186_cdna Constitutive 0 NULL GeneID:100336993 16 GENE LOC100336993 NULL hypothetical protein LOC100336993 EMBV3_30272 GAGGCGACGGAGGCCGAACGCAGAGTCCGGATTAGAAAAAAACGCAGTAAGAACTTTTAG Gene GeneID:528817|NEUROD2:XM_002695959:272_cdna Constitutive 1 NULL GeneID:528817 19 GENE NEUROD2 NULL neurogenic differentiation 2 EMBV3_19837 TTCCCTCCTCTGCGTCAGCGAAGAAATGTAAACTATCAGGATGGTCGGCAAGCTGAGCAA Gene GeneID:100125312|UBAC2:NM_001103344:2_cdna UTR3_Alt 5 NULL GeneID:100125312 12 GENE UBAC2 MGC142780 UBA domain containing 2 EMBV3_06007 GCTGGATTACAGGCATGGCAGCTCAGACAGCAGGAGAAGTTGCAGGAAGAAAAAAGGAAG Gene GeneID:509469|MRPL52:NM_001110180:104_cdna Constitutive 0 NULL GeneID:509469 10 GENE MRPL52 NULL mitochondrial ribosomal protein L52 EMBV3_34537 GGGCCTCTGGAACTTCTTGCTGCTCTGCACCGTCATCTATTTCCACCAGTATACTCACAA Gene GeneID:510040|FITM1:NM_001105351:119_cdna Constitutive 0 NULL GeneID:510040 10 GENE FITM1 FIT1 fat storage-inducing transmembrane protein 1 EMBV3_06568 AAGTTTCAAGAGCTTGCCTCGGCCATCAGTGCCTGGCTTTGTTTCTAGGGAACAGGGCGT Gene BVT0102_008326 - 1 EMBV3_05281 GK000006.2:62544162-62632293 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205305 TCONS_00205306 1 XLOC_124626 Coding TCONS_00205306 XLOC_124626 Coding Coding BEND4 6:62627796-62661182 j TSS153348 6080 1 TCONS_00205306_1 444 0.0148026315789474 5 0.818032050322001 0.00183885892666674 0.00165637051831021 0.00188546652981894 0.00145768186622841 0.0017966947279179 0.000592872305398474 0.00109032893773513 0.00106600327864127 0.00147794070322947 0.000331419122405106 0.000410807899683665 1.67898731004016e-06 0.000507746011289778 0.000765005624072832 0.000412629663192401 0.00105647713010184 1.0388602569225e-07 0.00181821883493877 0.00182611692034182 0.00166662439209511 0.000825532810580627 0.000634907503264001 0.000231267374890158 0.000737877508418505 0.00204377526195769 0.00165221598305702 0.00138922312677992 0.000118003766867366 8.0110363346369e-05 0.000131584751973404 XM_005207892.1 BEND4 PREDICTED: Bos taurus BEN domain containing 4 (BEND4), transcript 0.0 2592 100.00 0.236184210526316 NM_001159547.1 BEND4 Homo sapiens BEN domain containing 4 (BEND4), transcript variant 2, 0.0 2832 81.32 0.479276315789474 TCONS_00205306_1 sp|Q6ZU67|BEND4_HUMAN BEND4_HUMAN BEN domain-containing protein 4; 0.0 693 90.11 0.993243243243243 0 coding CGAGGGGGCGTGCGGCCGGGAAGCGGCCGGGAGGCGCAGGATGGAGGAAGAGATGCAGCCGGCAGAGGAGGGGCCCAGCGTCCCCAAAATCTACAAGCAGCGCGGCCCCTACAGCGTCCTCAAGACGTTCCCCGGCAAGAGGCCAGCGCTGGCCAAGCGCTACGAGCGACCCACCCTGGTGGAGCTGCCGCACGTGCGGCCGCCCCCGCCGCCCTTCGCCCCGCACGCCGTGGTCTCCATCAGCAGCAGCGAGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGTTCCAGGCGCAGGGATCTTTCCCCCCCGGGCCCGGCCGGGCCAACGCCGCCGCGTCGTCGTCGTCTCCGTCCGGCACCCCCGCCGCGTCCCAGGGCCACCTGAGGACTACGGCGGCGCCGCCCGCGGCCGCCGCCGCCGCGTCATCATCCTCCTCGTTCGCCGCCGTCGTCAGGTACGGGTCGAGCCCGGCGGCCTCCGCGGGCAGCAGCAGCACGGGCGGCGACGGCGCCAGTCTGGAGCTCAGCGCAGAGAGTCGTATGATCTTGGACGCTTTTGCTCAACAATGCAGCCGAGTCCTTAGCCTCTTAAATTGTGGAGGCAAACTTCTAGACTCCAACCATTCTCAATCCATGATATCTTGTGTGAAGCAGGAAGGCTCAAGTTACACTGAAAGACAGGAACCATGTCCTGTTGGCAAAGGGGTCCACAGTCAGACCTCAGACAATTTAGACATTGAAATGCAATATATGCAAAGGAAACAACAAACTTCTGCATTTTTGAGAGTTTTCACTGACTCCCTGCAAAATTACCTGCTCTCAGGGAGCTTTCCAACTCCAAACACCTCCTCGGTCAGCGAGTACGGCCACCTGGCGGATGTGGATCCTCTGTCAACATCCCCCGTGCACACGCTAGGTGGCTGGACCTCCCCAGCAACATCTGAATCCCATGGTCACCCATCATCATCTACGCTGCCTGAGGAGGAGGAAGAGGAGGAAGAGGAAGGCTACTGTCCCCGATGCCAAGAGCTGGAGCAGGAGGTGATTTCACTGCAACAAGAAAATGAAGAGCTCAGAAGAAAGTTAGAGAGCATCCCAGTGCCCTGCCAGACTGTCTTAGATTACCTGAAGATGGTGCTCCAGCACCACAACCAGCTCATGATCCCACAGCCAGCTGACCAGCCGACCGAGGGAAGCAAGCAGCTGTTGAACAACTATCCTGTCTACATAACGAGCAAACAGTGGGATGAGGCTGTAAATTCTTCAAAGAAAGATGGGAGGCGGCTCCTTCGATACCTCATCAGATTTGTTTTCACTACCGATGAGCTTAAGTACTCATGCGGCCTTGGAAAAAGGAAAAGAATTCATTAGGATGCACTGTACCTCCAACCCCGACTGGTGGATGCCCTCAGAGGAGCAGATAAACAAAGTGTTCAGCGATGCTGTGGGTCACGCCCGGCAGGGGCGAGCCGTGGGCACTTTCCTGCACAACGGAGGTTCCTTTTATGAAGGGATCGATCACCAGCCTTCCCAGGATGAAGTCTTCAATAAAAATTCCCAGGATGGATCTGGTGATTAGTGGACAAAATCTTTCCACACGAGCAGCCAGTCCTCTCGAGTTCCAATGGTGAATGTTCTGTTACCATCACTTTAGAATCCAAAGCATGTCACTCTGTCAGACTTTACACATCCTAAACCTTAACTCTCTTGACCTACTGCCAAACAGCTCCCAATACAAGTTTGGAAAGTGTATGGAGCCTGCAGAGGTTTTCAGAATACTATATTATACAAAGAAAAAACTACAGTTGATTTCAGTTAGATGGTGAGGGTGAAAAAAGATAGGTGAGTTCTTTCGCCTGTCTGATGCCTTCAGGTAAGCTCTGCTTCGTGAGCAGGGCTGGTCTCCATGGAGGTTGGTGTGGTGCTCATGGGAGAAGCTGGAGACGCAGCATTGTCCTGAGGGACACGGAACAGGCATTCTCATTTTAGTTCAGATAAGTTGTCTTTATGTTTTCCAAAGACTTGAATTTATACTTCTCAGCAAAGACATAGGATAGGTGACATTGTATGTTGTGTCTGCATTGACAAGAACCTGTTACTAAAACAGAAACCAGAGATCAGAGGTCACCTCTAGACAATGATGAGTTGGAAGCTAGCTGTTTCTCTCTGTTACTTTTTACCAAAAAATAAAATTTCTACTGTGTTGATAAGGAAGGCACTGTATGATCTCTGGAGTTGACGAACAGTAAAAGTTTTCACTGTGTTAGTCAAGAAACATCCAAAGATCCAAAACCATTTTCAAATGCTCAACTTTGTAGGTTCATAGATGCACAATTTCCACAGCCTTAAATCAGGCTCTGTTGACACAATGCCAAAGTGATGGGCTGCACAATGAGAGTTTCAATCAGCTAGTCGTTCGGTGCGCTGAGGACCAAACAAATGGTGAGGCCGATGGTGTTCACTGAATTTGTTCTGGAATTGTACACACACAGTTTCAAGGCCATTCTGACAACTATGCAACGGGCGTGTTTGTAATGTCTCTGAAATTTGAGGGTCTTTTTGTGCTGAGTTGATCTTTAGAATTTGCATAAATCTTGTTTCTCTTTGTCACCAATGGAAATGTTTCACCCCAGTTGTTGTACTTGCTTCCCTCCAGTATTCCCCTGAATTTCTGGCCTTGGCTGAGTTAGCACTGACCTTTCCCACTACTTTCCCCAGTTTAATTTGTTGAGCTCAAGTTTGTAGTAATGTCTTTGGAACCATTTCGTGTCAGCAGATGCTCTAGAGATGATAGAATCTGTTTCTGCTTCAGGTGTGGGTAGGAGGGGAGGCTTCCTTTATCACCCTAATCCAGATAACTGCATTCTTTGTAAAGCTTAGGGCTAAATGGGCAGCTTTTATTAAAGGCTGCTGCTGTTTTAGGCTTCACTGGGAATGGAGAGGATAACGTTAGAGCATTTGTTTAAAAAAAAAAAGTCATCATCTCTTTTGATAGGGAAATTGAGAGATGTTATATATGTGGCTGCTTCACAGCCGTAGAGCAAGTGGGTGATTTTATATTCTGGATCTTTCTTAGCCCTTCGTTAGTCACAAACATTGACTGTGTAGTCTTCTGTCAGTCATAAACTCATTGACCTTCATCAGAATTATAAGGTGATATATTAGTATATTATTTGATCCAGCTTCCCCATGTGTCAGATAGCAATAGGATGATTACGTCCAGTAAATTCTTATAATAGCAGATTTTTTCCCCAAAATCTAGACAACAGTACAAACTGGGGAATCTGCAAGTTCATGATGTCTGCATCTTCCTGCCGCTTTGAATGGCTTGACCTCCTGATGCTCTCAGAAAACAAATGGAGTATCAAGTAGGAAGCATGCACTGTTTTCAGAAAAACAAATGAATATTGCCCTCATTTGAATTCTGTCACTCAACATGAACTCTAGAACCTGACCTGATGCCCACAGACCACCTCCTTAGTTTTTCTTAGATTTCATTCATTTTAAAAAAGTCTCATTCTTGGATAGCTTCATTTTTAGAAAAGATTTAAACTTTTCTCATTCAATGCTATGTCGTCTCACCATACAGATGCTAATTTTTGACAGCTCTTATATACCAATTTTTAAAACGTAATAGTGATTTTCAACATATGGTGCAAGTCTTGCTGGTGTGTGTTTAATGTGGTGACACTTGCCAAAACTGCTTGGCAAAACATGTCAAATAGGATGCTTGAGTCAGAACGCTAGTGGAAATGTCTCTAAACAGCAGTATGTATCATTATGATATATTTTTGTAAACATAGTGATGGCTTCTTTCAGTCATGTAAGTACTGGATAAAAATAACCACTTCACTTGAAATAATGTGGAAAATGCCACCCAGTTGAGGGCCCTCTGCAGTTACTTGAATTATCAGCCAGTGGTTAGACAGTGGAGAATTAATGCTGGACAACATGAAGTGCACAAGTAATAACTCACCAGTACTTGCCTCCTAATTAAAATTCAAAACTATAAAGAGTATATTTACCTGTTAGAGACCACTTTCACCCTCCATGGTGTATTCAGTTGCAGAGAACACTCAGAGGAAGGACTTCAGTCATCTTAACGACCAGCTCGGTCAGTATGGCTTATTGATAGCACTGAATTACCATATCTTTGTGGTAAAAGCACCAGATTAAATTTCCTCATGACTGTCCAAAACTGGCTAATAGAAGCACTAGGCTTTCACTGAATCACAGTTCCCCAAATTACAATAAAAAATACATCTGCTAAGATGACTTACTCAAAAGCATGTTCATTGTCAGAATTGGCCCAGTACAAGTAGCCTGATGGGTCTTGCCTGCATTGGAAACTCTTCAGACCCATTCAGAACCACTGACAAAGCTATAGCTTATAGTTCAGAGTCCTGTGTGCAGGTGTTTTGCTAAGCACTTTATGCCTCCTCTCATTTTAATCCTCACAAGCACTCCCTAGGCTGTTATTGTTATCCCATTTTATTGAGCTTATTATTACTCAGCTAGTAAGGGGAAATCTTTGGGTTTAGAAAGTGGAATGACTCGTTCAGTTTTCTCCAATAGTTCCAGTTTTCTCCCGTTCTCAAAACCCATCAACACTTTGGGGATAGATTTGTTGTTTAATCGAAGTAGTGAATAAAATGACTAATTTGTTCACATTTCCATCATAGGGTTCCCAGTACAAAAATGCAGGGATATAAAAGCAAAACTTTGAACTCAGTGAAGTGATGTTCTTTGGGAACAGATAGATGTTAGACGTGGCACTGGACATCATTAGCCAGCATTCATTCACTTTTCACATCAGTTGTATTCGTAGCCTTAGATTTGATGAGTCTGGTTTGGAAGAGAGGGTTCTAACCATGATGTCACTGTGAGAATTGTCGTGAAGGTTTTGTAGGAAAATACAGTAATCTGTTGATCCTTTCCTTTAGTTGTGGCTTTAACACCTCTGGCTGTGTTTGAAGTTTCAAGAGGTTGCCTCGGCCATCAGTGCCTGGCTTTGTTTCTAGGGAACAGGGCATGCCAGGCCGTGAGAGGGGTCCTGAAACCCTGAAGGTCGCTGCTCCAGTCCGACCCTGCCCCATGTAGGCATTGCCTCTGTGTGTGTCTCCTCCCTGGAACTCGTGTAGCAGCCTGACACTGGGGCCAACTTGCCTTTACTCTATTTTCTATGAAGAACACATGTGCAGAAACTGTGACAAATCCATTGATCCTGATATTTTTATTGTTGAAGTCTTGTTGATTCTTTATTAATAATTTCTATTTGATTGTACTGTGTAGAGTTAATACCCACTAGAGATATGTTAATAAAGCTATAAATGCATAGTGTAATACAGGATAGCAAGATTTTTTGTGAACAATTTATATAGAAGAGTAAGTTGTTTTTTAAGTGTTAGGCACATTTCTTTTAGGAACTTAAAATGTTATAAGAGTTTTTTAAACATTCAATATTTTTAATTATAAGCAACATTTGTTACTAGAGCCAGTTATTTCAGGTGTTCTAACTGGAGTATTGATTTTATTACTTCATATACCTCTAGAATGCCACTTGTTCTGTTGGAGATAAAGTTGCACAATAAATGTCAAGTTTATGTTAAGTGTTTTAACTTGCTTTTTGCATCTTTCTCAAATTTATTCAAGACGCTTTTCTGGGTGTTTTTTTCTTTAACAAAACTTTTTTTTTTGCCTTGACACTAGGGCTTTTCTGCATGACTCAGAATGCCAAGAAAATGTTACATGCTTAATAGCCATATAAAAGATAGTTATGTCCAGGAACTGACCAGAACTCATCCAAAAAATCCATTTGATCTAGTGAATGAAGGGGACAACCAGTGATGAAGTGAAAGTGACATGTGATCCAAAATTTCTGCCCAGCATTTTCTGCAGTCACACTTTAAACATACATGCTTCTGTAGTTCCATTGCTCCGCGAGAGGACGAATGCTACAGTTTCTTCTCTTGACCCTTTAACAGTGAAAAGATGTTGATTGGTTATGAACAGTGACCTCATTACAAAAGCAAAGTAGCTATGGCTAAAGAAGATGGCATGGTGGCTTCCCACTAGT EMBV3_41877 TTCATTCACAGGGTGGAGTTCGGAGAGGTGTCCGGGCATCGGGTTCTTACCAAGAGGGGA Gene BVT0102_147613 + 0 NULL GK000028.2:39153667-39435545 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063810 TCONS_00162571 TCONS_00200854 TCONS_00186491 TCONS_00218947 TCONS_00148450 TCONS_00054133 TCONS_00142473 TCONS_00162568 TCONS_00162302 TCONS_00231771 TCONS_00218950 TCONS_00168478 TCONS_00156651 TCONS_00021875 TCONS_00168479 TCONS_00207544 TCONS_00255144 TCONS_00178728 TCONS_00011613 TCONS_00063807 TCONS_00131539 TCONS_00158397 TCONS_00186558 TCONS_00147823 TCONS_00178730 TCONS_00131535 TCONS_00149042 TCONS_00222116 TCONS_00168480 TCONS_00048460 TCONS_00080098 TCONS_00162566 TCONS_00231768 TCONS_00242222 TCONS_00186557 TCONS_00033186 TCONS_00217532 TCONS_00129560 TCONS_00207145 TCONS_00071451 TCONS_00208231 TCONS_00056187 TCONS_00162740 TCONS_00186834 TCONS_00222138 TCONS_00098203 TCONS_00011614 TCONS_00056283 TCONS_00131531 TCONS_00230828 TCONS_00178734 50 XLOC_038536 XLOC_099452 XLOC_122505 XLOC_112543 XLOC_132266 XLOC_090330 XLOC_031942 XLOC_086898 XLOC_099449 XLOC_099184 XLOC_141259 XLOC_132269 XLOC_103118 XLOC_095111 XLOC_012548 XLOC_126059 XLOC_158076 XLOC_108501 XLOC_007164 XLOC_038533 XLOC_080244 XLOC_096851 XLOC_112610 XLOC_089710 XLOC_108503 XLOC_080240 XLOC_090919 XLOC_135425 XLOC_028592 XLOC_048982 XLOC_099447 XLOC_141256 XLOC_148886 XLOC_112609 XLOC_019420 XLOC_131531 XLOC_078273 XLOC_125663 XLOC_043222 XLOC_126744 XLOC_033990 XLOC_099621 XLOC_112885 XLOC_135447 XLOC_058449 XLOC_007165 XLOC_034086 XLOC_080236 XLOC_140318 XLOC_108507 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_27135 GCATCATCCGGAGACTGAAGAAGAACTCTGCCAGGAGAAGTGTTCCAGCAGTTACCCTAT Gene GeneID:509167|CCL19:NM_001034345:13_cdna Constitutive 0 NULL GeneID:509167 8 GENE CCL19 MGC128734 chemokine (C-C motif) ligand 19 EMBV3_11453 CAAGGTGTGCTCCCTGCTGATGGCGGGGGTTTATATGGTGGGAATTATGGATGCTTCGAT Gene GeneID:787642|LOC787642:XM_002693856:34_cdna Constitutive 0 NULL GeneID:787642 16 GENE LOC787642 NULL similar to CfOLF2 EMBV3_27408 CCATGTGGCTGTGATCTCCTGTTCATCCACTTCATGTGCCTTAGGGCTGGAGTCAGTTGT Gene GeneID:511245|CHST14:NM_001098012:142_cdna Constitutive 0 NULL GeneID:511245 10 GENE CHST14 NULL carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 EMBV3_01454 GGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCACATCCCCTGCC Gene BVV0102_292859 + 0 NULL GK000022.2:26322520-27249282 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073436 TCONS_00010777 TCONS_00201334 TCONS_00054120 TCONS_00081557 TCONS_00085042 TCONS_00192189 TCONS_00066205 TCONS_00201377 TCONS_00192192 TCONS_00058089 TCONS_00151324 TCONS_00192191 TCONS_00184696 TCONS_00011149 TCONS_00129429 TCONS_00016526 TCONS_00152803 TCONS_00184697 TCONS_00251614 TCONS_00220090 TCONS_00048995 TCONS_00060246 TCONS_00199917 TCONS_00252867 TCONS_00164317 TCONS_00109880 TCONS_00124051 TCONS_00048033 TCONS_00189997 TCONS_00030426 TCONS_00135598 TCONS_00254915 TCONS_00022348 TCONS_00037648 TCONS_00037617 TCONS_00230914 TCONS_00203551 TCONS_00022124 TCONS_00184695 TCONS_00223475 TCONS_00251840 TCONS_00062751 TCONS_00037838 TCONS_00209837 TCONS_00192190 TCONS_00129205 TCONS_00015588 TCONS_00034471 TCONS_00143669 TCONS_00041515 TCONS_00000529 TCONS_00151323 TCONS_00179493 48 XLOC_045201 XLOC_006328 XLOC_122981 XLOC_031929 XLOC_050436 XLOC_051775 XLOC_117131 XLOC_040919 XLOC_123023 XLOC_035886 XLOC_092086 XLOC_111408 XLOC_006700 XLOC_078142 XLOC_008827 XLOC_092568 XLOC_154555 XLOC_133407 XLOC_029126 XLOC_036632 XLOC_121569 XLOC_155808 XLOC_100199 XLOC_065784 XLOC_075603 XLOC_028165 XLOC_116032 XLOC_016679 XLOC_081821 XLOC_157847 XLOC_013018 XLOC_021478 XLOC_021447 XLOC_140404 XLOC_124202 XLOC_012795 XLOC_136775 XLOC_154781 XLOC_037478 XLOC_021667 XLOC_128348 XLOC_078064 XLOC_008519 XLOC_020687 XLOC_088090 XLOC_025321 XLOC_000141 XLOC_109265 Coding TCONS_00000529 XLOC_000141 Coding Coding - 1:45088092-45096984 - TSS270 8451 4 TCONS_00000529_10 143 0.745473908413206 2 0.0497131931166348 2.01012307707297e-05 1.49871009079085e-05 1.36625311347943e-05 4.53987540290904e-06 1.24531364209072e-05 5.00814608360259e-06 8.46442312822931e-06 1.24185267133133e-05 4.13121620626016e-05 0.001823279532659 0.000814409045036406 0.000443886703423644 0.000426802436486759 0.000631969837416122 0.000420788496196143 0.0164351832051245 0.0118459757916584 0.0133511864103435 1.34853947675417e-05 9.74488686084332e-06 4.71379726774531e-06 0.0113995265993752 0.0116294525732748 0.0115848317310599 2.19528616543606e-05 1.81962347473363e-05 1.11450810621553e-05 0.00508280936174051 0.0025318551055437 0.00742716955264329 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1225 90.86 0.102828067684298 TCONS_00000529_10 sp|Q08DI6|RNF11_BOVIN RNF11_BOVIN RING finger protein 11; 6e-28 104 42.47 0.895104895104895 0 noncoding 1 1 1 1 0.0450297516627036 0.769473730118356 0.00899590186576138 0.845664037517258 TATTTCGAGAAACTGATCCCAATTCTTTATTTTCCATGGTCTACTTTTATACACTGAGATGTTATGCAAAAGTCACATGGGGTCAGCAGTCCTGACTTTTATCAAAGTCAGGTGCTTCATACAAATGTATACAGAGGTCTTAGGGGTATTACATCATCTTCTGGCCAGGGGGCCTGCTGACAATTTATGACCCTCTCCTTATGACAGCGGTCAGTCAACCAGGACACTTATTTCTCCAGGGGTGATTATTCTTAAAAAAGACTCCACCTTCCGAAGGTACCAGATAAAGTTACATTCCTATAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAACCTAAAGTCTAACGTGATGGTCCAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTGGCTCAACAAATGAAAAACCCTTCACCAATACAATTTCTAATCAGCCCACTACTTATACTAATGGTTTTCTAACTTTTCTAAGGAATCTGTTTTTAGAAGGTTTAAAGCATCTCGTGCCTCTCACGGTTGGGAGGCTGTGAGCAATCACTTGTGGCCGGACAAGCCTGTCAGGCAGGCTAGAGAACCTTCAAAGGAGTTTGTAGGTTAAAACACTCTTGTCATGCCCAGGAGTTTTTATTAACTGGAGCTGTAAGTTAATTCCTTCTCCGAAAGAGGTGGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAGAGCACAAAGTAGTAAAGTAGGCAGGCTCTGGTTATGGGGGTAGATGCTCGAGGATTTCCAGGGGGACTCCTGAGACTTGATCCCGCCTTTGCGTATGTCGAGCCTCCTTCCTCATGACCTTTGCCATGGGTGGAGGTCCTCACACCGGCTCCCAACAAGAGTGAAATAGTTGGCTTAAAGCTCAACATTCAGAAAATGAAGATCATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAACTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCTGTCTAGTTAAGGCTATGGTTTTTCCAATGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCATTTGACTGATGCTTTTGAACTATGGTATTGGAGAAGACTCTTGAGAGTCCCTTGGACTGTGAGGAGATCCAATTGGAAGGATCTATGTTGGAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGCGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGAAGGGGACAACAGAGGATGAGATGATTGGATGGCATCACTGACTCAGTGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATAGACAGGGAAATCTGGCATGCTGGAGTGAGGTTGGACACGACTGAGCAACTGAACTGAACTGAAAATGAAAAGATCTAGCTTGATTTTTCTTCAAAGGTAATTTATGATTTATTATTTAACCTGTGTCCTATGATTGCCAAATTTTTTAATATTATTGGAAAATAAATGAGTTGAAAAATGACATTACAGGAAGATCAATTATACAACTAGATAATTTATTTCAGGATTCTGCAGTATTTTGAAGCTTGGAGAATATTCTGGTCCTTAGGTACAGCAGCTAAGTGTGATCTGAAGAGACCCACGCCGGATGGTTTTCTCAGACTTAGAGTACGACATGGGGTGCTCCAGAGCCCTGAAAACTGTATCTTTTTACAGCGCCAGCATTTCTCCTTTTGCCATCCTGGCTTGAGAGGATGCTGGTAGCTTAGGTGTTGTCTTGGGAATGAGGAGTAGGATGGTTCTGCTGCTAAGAACTAGTAACAGTCTCTAGCTGCATCAGGACAACACAACCTCACAAAGCAGTGAGGCCACTGGCCACTCACAAAACAGAGATGGCCACTCTGTCTGGCAGACTGAAGGAGCAGAATTCCAGGAAATGCCAGTTTTCCATAATTGTATCATTGCCATGTTCTGTGCCTGGGGGACATACTTTATTAAAGAGGTTGGGTCGATTAGATTTGTTCTGACTGGTATCCAGGTGGGTTACTCAGGTGGCTGCCCTGGATTACCTGCATGATGAGATTATGTGACCCAAGGGGTTCCATACCTGATGAGGTTATATCAATGATGGGGTTAAGCTGCATATAAGAGCTCACCATCTGAAAGGGGCTTAGTTTCTAGAGAGACACTCCGTGGTGACAGTGACCCCAGCAGAGAACTGGCTTTGTCATCTTCTCTATAGATTTGGATCCTGACCTGGGAACCAGGAGGTGTCCTGCAGAGCCGGCTGTCAGCAGCGGACAGGGACCTCACCCCCAGGCCTGAAAGATGGGGAACTGCATCGGCTCCAGCACCGGGGACGACCGGCCGGTCGCTCGGTTTCCGGCCCCCCTCCGAGAGCGCAGAGGCGGAGACGGCCCGGGGGCGGGGGGACCGCGGGGTCCGGAGCGGCGCGGGGCGGGGGCAGCCCCGCCGGGAGCGCCGCTGACCTTCCGTCGAAGGATCCGCCTCATTCAGAGCCCACCTCGAGACGTGTACGGAAGGGATGGATGCGAGACGAAGACCACCGAGTGCGCGGTCTGTCTGATGGACTTGGTGCCCGGGGACCTCATCCGGCCTCTGCCCTGCAAGCATGTGTATCACCTGGACTGCATCAACCAGTGGCTGACCCGGTCCTTCACCTGCCCGCTCTGCCGGGGGCCCGCGGACGCCGCGCAGCCTTTGTTTGAGGACGCTCTTGAGCCCAGACCCCTGGTGTGATTGCAAGGGACCCATCATTTTTACTGATTTCCATGTTCCGTACTGTGCCCAGATAGCCAGGGGTTAGGAATTTAAATCGTGCACAAAGGTTTATTAAAAGTTCCTGGAATGTGGCAGATGTCCGGGAACCGTTTCTAATGTTTTAGAAAGATAGGGAGAAATAGCGGGTGAACCTTGACCAAGTGCTGAGAGGTATAATGACGTCTTAGCATTGTCCTCTTGCTAGAACTGTGCACCCTGTTTCAGCAGCTCTACGTGTTGCATTGCATCTGTTGAACGTCAGGGAAAGATAGTGGTTACTCTTCCTAAATGAAATCAGATTCTTCTCCCCCATCCAACTTAAAAGTTGCTGGCATTTAGGCCACAGTTTTATGAAAAGTTACAATTTATACAACTGAACTAAAATAAAATCAAAGTATGTATGAGTGAATACCTGAAGAATGTTATTCTCAATTGAGCCTTCTAAATGGTCTTATCCGTTTGTTCTCCATCATTTTGAGACCCTTAACCCTTTCCTCTTATAAATCCAAACCAGGTGAACAAAGTGTTCCAGGGAAGAACAGTCCTGAGCAGGTTTATTATCTGTGTAATCAGGGCGTGTCCAGGCACTTTAGCTGTGTTTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTATCAGGTTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTGCATTGCCGGTTCCTTCTCCGGGGGATCTTCCTGACCCAGAAATCAAACCCGGGTCTCTCACATTGCAGGCAGACGCTTTACCATCTGAGCCACCAGGGAAGCCCAAGGGAAGATAGTTCTCCATTAAACTGGAAGTCAGCCAGCTTCACTCCAGTTCCACTTTACAAGCCTTATCAATTTACATTTTCCTACCAAAGCAAATACTTAAAGTTTGAACTTTCAAAATTTTCTACTTTTTATTTGTCTTTATCTCTTATGGTTGTGAAGAGCTAATTCATTGGAGAAGACCCTGATGCTGGGAAAGATTGAGAGCAAGAGGAGAAGGGGGTGACAGAGGATGAGATGGTTGTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTATACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGATAAGGGGCGCTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAATCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACGGGAAGCCTTCCACTGACGAAGAGGGGAGCGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCCAATGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCACTGCCCTGTGCTTAACTCTAGAGCTCGGGTCAGGGCCACCAGCTCCGCTAACTGAGCACTAGTTTCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGATAGTGGCAGGATTTAAATTTCCACAAACTTTAAGTTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAATGCCGTTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGACCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCGATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATACGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAATTTTGTAGATCCCGTGACAAACTTTGTTCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAATCCTTTCTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGTTCCACATTCATGAAAACAGATGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTCTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCTGGGGGCGGCTTAGATCCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGATTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCTTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTGCCTAAGTCCCTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGTGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATCTCTTACCCCTTGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCAGGTACGGGGGCAAAGTAAGAGGATAGGAGGGAGCTGAAGAT TCONS_00000526 s 3' 6565 TCONS_00000526 s 3' 6565 EMBV3_24245 CAGTCAATCCCCTGCTGCTAAATGATGGGAAGTGGTCTGGCCTGGTCTGTCTCCTGACTT Gene GeneID:509184|LOC509184:XM_002689035:102_cdna Constitutive 0 NULL GeneID:509184 7 GENE LOC509184 NULL similar to transmembrane emp24 protein transport domain containing 9 EMBV3_19762 GGGAAGATGGCAGATATGTACACCCGTCTCATGGCCTGTCGTCAGTACGTCTACAACGTT Gene GeneID:510440|IVD:NM_001034382:136_cdna UTR3_Alt 2 NULL GeneID:510440 10 GENE IVD MGC127338 isovaleryl Coenzyme A dehydrogenase EMBV3_33903 CCACTACTGGAAGGGCTGTGGAACCTGAGTCTGAGTTTGTCATCAGAGTGTCGGATATCA Gene GeneID:781265|CDH19:NM_001099181:127_cdna UTR3_Alt 1 NULL GeneID:781265 24 GENE CDH19 MGC159825 cadherin 19, type 2 EMBV3_08331 CCCGAATGTGTCTTCCCCTTTATCTATCGCAAGAAATCCTATGAAAGTTGCACACGGGTG Gene GeneID:317699|BSP5:NM_174842:83_cdna Constitutive 0 NULL GeneID:317699 18 GENE BSP5 BSPH1 binder of sperm protein homolog 1 EMBV3_26038 AAGTAGGAACCAATACTGAGGAAGACAAACCACACGAAAACAGTGGTACTCTCTGCAAGG Gene GeneID:508809|DHFR:NM_001077883:7_cdna Constitutive 0 NULL GeneID:508809 7 GENE DHFR NULL dihydrofolate reductase EMBV3_26918 GAAGAAATTAGAACCAGGGACCCAATGAAGTCACAAACACAGACCGTGGCATTGGGCTAG Gene GeneID:511987|COQ4:NM_001083672:64_cdna Constitutive 0 NULL GeneID:511987 11 GENE COQ4 NULL coenzyme Q4 homolog (S. cerevisiae) EMBV3_37715 CAACCAGAACCAGACCCGCAACTGCTACCAGAACTTCCTGGACTACCATCGCTGCATCAA Gene GeneID:503554|COX6B2:NM_001012684:139_cdna Constitutive 0 NULL GeneID:503554 18 GENE COX6B2 MGC133523 cytochrome c oxidase subunit VIb testes-specific isoform EMBV3_16190 TTTAGTAGCTCACAAGGACATTGCTAACTGGCTTTCTGTGAAACTTTAGAAGAGACAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05266 GTGTGCAGTAACGCCCTGAAGGACGCCTCCTTGTCCATCATCTGCCAGCAGCTGGGCTGT Gene GeneID:100337443|LOC100337443:XM_002698501:598_cdna Constitutive 0 NULL GeneID:100337443 26 GENE LOC100337443 NULL CD163 molecule-like 1-like EMBV3_18280 GTCCCCGCCCCACGCGACGCCAGGTGGAGAAGTTAATTGCATGCTGCCCACAAGCAGGTA Gene GeneID:100141191|LOC100141191:XM_002698747:3_cdna Constitutive 0 NULL GeneID:100141191 27 GENE LOC100141191 NULL hypothetical protein LOC100141191 EMBV3_25607 ATGCTGGGCGTGTCGCTCTTCCTACTTGTCGTTCTCTATCACTACGTGGCCGTCAACAAT Gene GeneID:617040|LOC617040:XM_002691457:298_cdna Constitutive 0 NULL GeneID:617040 11 GENE LOC617040 NULL similar to hCG23722 EMBV3_35542 GGCCTCGCGGAGAGCTTACAGAGTGTAAATCTGCCTTTACTTGGATTGGTTGGTGCAGTA Gene GeneID:539013|CDYL:NM_001102223:229_cdna UTR3_Alt 2 NULL GeneID:539013 23 GENE CDYL MGC148813 chromodomain protein, Y-like EMBV3_11827 GGCGGGAAGTTCTTTAGGTTCCCTGCCACAGAAGTGCCCATCAGGTAAACCAAATGTTTA Gene BVT0102_188956 + 0 NULL GK000020.2:3124085-3132654 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04027 ACATCAGCGTGAAGACGCAGAAGGAGACAGAGCACCTGTTCATCCAAACCTTCTGGCAGA Variant GeneID:510240|RRP1B:XM_002685143:96_cdna 187^327 1 EMBV3_34368 GeneID:510240 1 GENE RRP1B NULL ribosomal RNA processing 1 homolog B (S. cerevisiae) EMBV3_30766 AGGAAGATCCCTTTGAGAAGGAAATGGCAAACCACTCGGTATTCCTGCCTGGGAAGTCCC Gene GeneID:526748|CYB5RL:NM_001105397:70_cdna Constitutive 0 NULL GeneID:526748 3 GENE CYB5RL MGC155313 cytochrome b5 reductase-like EMBV3_30364 TGGCCACCCTGGATGATGGTTTGATGAAGAATGACTGCCGCACGTCCAGGTATCACATCT Gene GeneID:505310|SLC5A5:XM_002688572:263_cdna Constitutive 0 NULL GeneID:505310 7 GENE SLC5A5 NULL solute carrier family 5 (sodium iodide symporter), member 5 EMBV3_24158 GAACAGAGGTTTCATACTGAGAAAGGGATTTCTTAAGTCTCACTATGGATCGGATATCCC Gene GeneID:100125240|PLN:NM_001103319:17_cdna UTR3_Alt 1 NULL GeneID:100125240 9 GENE PLN MGC152249 PLB phospholamban EMBV3_14470 GCCCCAGGGTCTGCTCAGCCTGTCTTCCTCCATCCCAAATGAAAAACAAAAGGACAGCTA Gene BVT0102_021576 + 0 NULL GK000007.2:4664266-4669452 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211545 TCONS_00211547 TCONS_00211546 1 XLOC_129903 Coding TCONS_00211546 XLOC_129903 Coding Coding ELL 7:4586556-4665925 = TSS158928 4002 1 TCONS_00211546_2 616 12 0.949727850015119 0.0028400304435338 0.000734571228276975 0.00378415065182597 0.00442782874426268 0.00339136990951516 0.00211298893305876 0.00185104240906827 0.00122260965605446 0.0016508494438398 0.000320125414953873 2.499808554308e-09 1.40680916076993e-05 0.000237830424459864 0.000448263067312225 9.77801433467685e-05 0.00162337158235305 0.000324515720000007 0.000194648388286611 0.00250228749927527 0.00405639687660811 0.000963810948064594 0.000119469056360577 2.384179618099e-05 0.000374920732176281 0.00664051507689065 0.00116799707304363 0.000916959831118275 0.000207160401529526 2.58941640081881e-05 0.000443217903378796 XM_005208429.1 ELL PREDICTED: Bos taurus elongation factor RNA polymerase II (ELL), 0.0 6747 100.00 0.934532733633183 NM_006532.3 ELL Homo sapiens elongation factor RNA polymerase II (ELL), mRNA. 0.0 2388 87.45 0.478760619690155 TCONS_00211546_2 sp|P55199|ELL_HUMAN ELL_HUMAN RNA polymerase II elongation factor ELL; 0.0 1059 88.24 0.998376623376623 2 coding 1 0 1 0 -0.476685412715407 0.0198283397780245 -0.0637349085538995 0.35502299875911 CGTGGCCGGCGCGCCGCTGGCCCAGGAGCCGGGAAGCGGGGGGCGGGGGAGCGATGGTCGCAAGATGGCGGCGCTGAAGGAGGATAGGAGCTACGGGCTGTCGTGCGGGCGGGTGAGCGACGGCAGCAAGGTGTCCGTGTTCCATGTGAAGCTCACCGACAGTGCCCTGAGGGCCTTCGAGAGCTACCGCGCCAGCCAGGATTCTGTTTCACTGAGACCTTCGATCCGATTTCAGGGAAGTCAAGGGCACATCTCCATCCCTCAACCTGACTGCCCCACGGAGGCGCGGACGTTCTCCTTCTACCTCTCCAACATCGGCCGCGACAGCCCCCAGGGCAGCTTCGACTGCATCCAGCAGTACGTGTCCAGCCATGGGGATGTCCACCTGGACTGCCTGGGCAGCATCCAGGACAAGATCACAGTGTGCGCCACTGACGACTCCTACCAGAAGGCGCGGCAGAGCCTGGCGCAGGCTGAGGAGGAGACGCGCAGTCGAGGAGCCATTGTCATCAAGGCCGGAGGCCGTTACCTGGGCAAGAAGGTTCAGTTTCGGAAACCGGCCCCGGGGGCAGTGGATGCCGTGCCCTCCCGGAAGCGGGCAACCCCTATCAACCCGGCCAGCGCCATCAAGAAGTGCAGCGCTGGCAGCGCTGGCGGGGGCAGCGGGGTGTCTCAGCGGCCCTTCCGGGACCGCGTGCTGCACCTGCTGGCGCTGAGGCCCTACCGGAAGGCCGAGCTGCTGCTGCGGCTGCAGAAGGACGGCCTGGCACAGGCGGACAAGGACGCGCTGGACAGCCTCCTCCAGCAGGTGGCCAACGTGAATGCCAAGGACGGCACGTGCACGCTGAAGGACTGTGTGTACAAGGATGTGCAGAAGGACTGGCCCGGCTACTCGGAGGGAGACCAGCAGCTGCTGAAGCGGATGCTCGTCCGGAAACTGTGCCAGCCACAGAGCACAGGTGGCCTCCCTGGAGACCTTGCTGCCAGCAGTCCTCCGGGCGAGCACGGGAGCTCAGCCTCGCCCCCTCAGAAACGGCCGCAGCCTCCTGATTTCATTGACCCTCTGGCCAACAAGAAACCCAGGATATCGCACTTCACCCAGAGAGCTCAGCCCACAGTCAACGGGAAGTTGAGCACGACCCTCGGCCGCGAGGGCCTGCTGCCCACCCCGGGCCCTCTGGCTGGTACGGACACCCACCTGCCCCTGCGACTGGAGCCGCCGCGGGCCCACGACCCCTTGGCCGACGTCAGCAACGACCTGGGCCACAGCGGCCGGGACTGTGAGCGTGGGGAAGTGGCCGCCCCAGCCCCTACTGAGCGCCTCAGCATGCCCCTGCTGACAGACTGTGCCCAGCCCAGCAGGCCCCACGGCGGCTCCTTGCACGGCAAATCCAAGAAGAAATCCAAGAAGCACAAAGACAAGGAGAGGGCAGCCGAGGACAGGCCCCGGGACCGGCCACTCAGCCAGACGCCGGGCCCCCCAGCCCCTCCAGTTGCCCCACCAGTCGCCCCGGGTTTAAACGGGACCTGCAGCAGCTCAAGTGTCCCCACGTCGACCTCGGAGACGCCCGACTACTTGCTAAAATACGCCACCATCTCCTCCTCGGAGCAGCGCCAGAGCTACAAAAATGACTTCAACGCTGAGTACAGCGAGTACCGAGGCCTGCACGCCCGCATCGAGCGGGTCACGCGGCGCTTCACGCAGCTCGACGCCCAGCTCCGGCAGCTCTCGCAGGGCTCTGAGGAGTACGAGACTACTCGTGGGCAGATCCTTCAGGAATATCGAAAAATCAAAAAGACCAACACCAACTACAGCCAGGAGAAGCACCGCTGCGAGTACCTGCACAGCAAGCTGGCCCACATCAAGAGGCTCATCGCCGAGTACGACCAGCGACAGCTTCAGGCATGGCCTTAGCCCCAGGCCACGGGGCAGGAGGTCCCACTCGACCAGCCAGGCCAGCTCACCTCACCGGGCTGACTGTTCTGGATGGTGGGGGAGCTGGGGGCAAGGGGGAGCTAAAGACAAGAAAACAGAGATTTATTTAACACAATAAACATGAGGAAGAATACAGTCATCTGAGCCAGCAACACCGGCTTTCAGGGGAGCCCACGCAGGCCTGGCCGCCCACAGGTCACACAAACCCAGGTAGAGTGTCCAGCTCCCCCCAGGCCCCCCACACCTCCTGTGCAGGCCCCCTGCCTAGGACGGGCTCCTCAAGAAGCCCCCCTCCTCGCCAGCCACCCCACGGGGGACTTCAACTTTTTGTCAGAGAAAGACTCCCAAGGCCAGCCTGCCTGCTTGCCTTTTCTAGTTTTATACAAAGACAGGCTACTGCTGACGAGACTCGAGTCTATTTTTGTACGAAAGAAAAGCATCTTTTTTCTACACCTGTGCCTCCCCTCCTTGGACACCCGGGGTCTAGACGCTGCCCTGGGCCCTTCCTACAGTATTACAGATGCTCCGGAAGGCTGGCCTTGCCTCTGCGAGCTCGGAGGAGAGAACCGGTGGGGGGCGCCGGGGGCCCCTCTCCTGCACTGGTCTCCCTCGCACACGGCCTCTGCCTGGCTCTGAGTGGGGCGGGCTGGGCAGTGCAAGCCCTGCAGCTCTATTTGGAAAACCCCAGCTGGCCCGGGAGCAGCTGCGGGGAGCACCAGGCCCGCTTGCTATTCCAGGCCCTCAGCTGTCGGGGTCGCCGGGAGCTTCTGTGCTTGTAGCCCGCGCTCTGCAGCACCGGCGTCGGGTTTTCTCTCTCTTCTCCATTCTCTCCTGCTGCTGCTCCTCACTTTGTACTGCTGAGGCCAAGTGGCCTCCGTGTTCTTGACCTCGCTCCGCCCCTCAGCCCCATGTATGGGTTCTGGGGTCGTCTTTGCAGAGCCACCACGGGGTTTGCACTCAGGGAGGGGCTGGGGGTCGAGGGAGCCAGGGAGCCCCCGGAGAGTGAGCTCAGAAAAGGTGCCTGATCCCCCCTCTCTGGGGGTGCTGGCCCAAGGACACCCCAATTGCTGCTTAGTCACTGTGCCTAGTCTAATGTCCCTGAAAGCGTCAGGGGGCATGTATATGTTTGTGTGTGTGTGTGTGTGTGTGTGTGGGGCCCCGCCAGGGCGTGCTGGGGTCTAAAGCGCGTGTTCACGTTAATTCAGAGCCACGTTCAGCGAAGCCACGATGGGGGAAGGCCGTGGGGCTGGTTGCAACCCCCAGCCCAGGGGTCGCTGTCGGGGGCGGGGGCAGGGGTTGCTGCCAGGATCCTAGTGAGGCAGGGAGAGTGGAAATGCTCATAGTCATGTCTATTTTTCTAAGCTGTGGGGGTGTCTCCTAATGGCTTCCCAAAGAGCAGTCATGCCTGCAGTGCCCCCACCCCACCCCAACGTCTCCGCGGGACCCCTGGGGTGCCCGGAGCACTGAGGAAGCTGATCCTTTATGTTTCAGTAGCTGTCCTTTTGTTTTTCATTTGGGATGGAGGAAGACAGGCTGAGCAGACCCTGGGGCCCTGAGTTCTGTGGACAGCCATCATGCACTCAGCCTGGACTCGCAGACTCAGATGGTGCGGGATCGCTCAACGGGCCCCACCCGGGAGGGCCCACCTGCCCTCTGCCCTGGGGTCCAGTTCGAGGGACTCTCAGTTGAATTTCCTCTTCCTCCTCACTGTTTTTTGTTGTTGTTTATTTTCTCCTTTTAAGGAATTATGAAGCTAAGAGGAGTTTTGTGCTTGGGGCGGGGTTGATGGACAGAAGCTCTAGCTGATTAAATATGGTCTAACTTATTGATACTGTTTTTTTTTCTTTTAATATTGTACTGTGGAGAAAAACTATTTTGAGCCATGGAGTTGGTGTTTACAAGAACTTTTCACTTTTGCCAAAATGTTACAATTGAAAGACGTCTGCATCTTCAGTTCCTAATATTTTCTTAAAAGAACTAGTGTCCTTTTTGTACACTAAAGAGGTGAATGCTGATTTTTTTTCAACCTACAATAAATTCACTGAACTGAATCTGTGAGCCCAAGC EMBV3_38132 AGCTTTTAACTCGAAGCTGCGAAGAACGCGGAGTCAATTTTGCTGCCCGAAAGGTGCACA Gene GeneID:100297225|LOC100297225:XM_002689924:20_cdna Constitutive 0 NULL GeneID:100297225 8 GENE LOC100297225 NULL hypothetical protein LOC100297225 EMBV3_32235 GACGCTTTACCATTTCTGGGCTGGATCCTCTGTACATATCCTATTCTGGTCCTTAGGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09159 TGAGCCTGCCCGCCCTTGACCGCCGCCCGTCCCAACCCGGGCTGCTGAGAGCGGGCAGGC Variant GeneID:100126445|DGCR6L:NM_001110446:5_cdna 518^666 1 EMBV3_32102 GeneID:100126445 17 GENE DGCR6L MGC134025 DiGeorge syndrome critical region gene 6-like EMBV3_00675 GGATGACAAAATTCATGGTGGGAAATTAGCACAGAAATGAGCAGAAGTAAATTAACATTG Gene BVT0102_101685 + 0 NULL GK000015.2:5693060-5718671 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060488 TCONS_00060490 TCONS_00060493 TCONS_00060495 TCONS_00060489 TCONS_00060491 TCONS_00060496 TCONS_00060497 TCONS_00060492 1 XLOC_036754 Coding TCONS_00060497 XLOC_036754 Coding Coding DYNC2H1 15:5653069-5696575 j TSS45227 6316 1 TCONS_00060497_12 914 0.302089930335655 19 0.855258016319963 4.50411904044425e-05 0.000153037773916712 0.000136483137247403 5.54124133762912e-05 1.75141636072301e-20 4.22955634763392e-62 4.52912559094104e-05 2.84449209299413e-21 2.68193408456203e-05 5.35472737607295e-06 0 2.10155301902632e-23 8.68375095683213e-28 1.21516490282383e-149 7.19124784812198e-05 0.000165573435887943 6.7147840285351e-19 1.62094560735403e-05 2.95405782537069e-39 1.53110543110858e-05 7.4284759795022e-06 4.53936917493006e-50 7.27002362634505e-27 1.36914681839571e-29 2.26428526919284e-05 2.89606689225826e-05 2.23492741632216e-05 3.09926948474727e-05 1.71041127689044e-31 1.00850900175314e-66 XM_589775.7 DYNC2H1 PREDICTED: Bos taurus dynein, cytoplasmic 2, heavy chain 1 (DYNC2H1), transcript variant 2, mRNA. 0.0 5086 99.93 0.447118429385687 NM_001377.2 DYNC2H1 Homo sapiens dynein, cytoplasmic 2, heavy chain 1 (DYNC2H1), 0.0 3905 90.41 0.450918302723243 TCONS_00060497_12 sp|Q8NCM8|DYHC2_HUMAN DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1; 0.0 1761 92.86 0.9945295404814 0 coding 0 0 0 0 -0.0359819600485452 0.830065952877838 -0.00397019711945022 0.933743230709182 CTTCATTCTGTAACTTACTATCTGTGAGATTCTTTATTCTTTATTCAAGCTTCCTGAGTCATTTTCCACTCTAGGCCTAAGTCTGGGTAAACAGCTGTGAACAAGATACACAACATCCTTACCCTCATTGGGTTTACATGTCAGCTGGACATCTAGATTAATATGTTTTTTTTTTTTTTTTTGACATCTGGGTTAAAATGGATTGAAAACTCAAATTTCATATCTTGCGTAAGTCCAAAAGGCATCAAGATTTTAAATATTTCTGGGAGGATGAGATTCTCATGATCTCAACAGCTTTCTTTATTCATGTCCCTACATGTATTGCCTTTTCATTCATTTTAATTCATATTACCTAGGATACTTAGACATTTTATACATTCCCACCAAAATAACTCATCTAGACTAACCATTTGTGAGTTATGGAAGCTTTCCTTAAGATCCTGGGAAGGGTCATTATGCCCATCACAGAGCAAGAATCTCTGTATCCCTATTAGCCATTTTTGTTTCAAAGGCCTTTTTGGCTACCCAGTCACCCTGGGTTCCTATTTGGAGTCTCCAGCATTCTACCTCACTGACTCCTCTCCCACTTTTCAAACTGTTTTGTAAGAATCTGAACTCATTTCCTTTTATAATTTAAAGGACTTCAGCTTTCTTTAGTTTCCATTCCCAGAACTCAATCAAGATGCTCAGGAGATAAAATGACCTTTCTAATTCTAAAAGAATACAGTTGTGATTATTCGGTACAAATAAAAAATTAGTGTCCTTTTCCCTAGGTAATGGCTCAAATCAGGGCTGAGAAGACTGAGTACACCAAAAACCCTTAGGGCAGAGACTGTAGCCTCGAGGGCCTAGTTCATTACATGGCATATAGGAGCATGTGGTAAACATCTTTAGAAGATAATTATTGAATTCAGAGTCTTTGATGAATATTGAGATAAATGGCAGTTTAGTAGTTTCTAGTGATGCCATGGAGTAGAAAATGAAGCCTAATTTCACTTCTGTATTTCTTAAGTATTTGGTTGTGCTATTATAAAACAAATTAACAAGTACCATACACTGTTTTGGTTATTTTACAAATATGGTTCTGTGTTCTGATGATGATTGATTATGATGAAAAAACTGGTTAAATTTTTCAGAAATTAATAATAGGATGACAAAATTCATGGTGGGAAATTAGCACAGAAATGAGCAGAAGTAAATTAACATTGTATTAAACTCCTATTCTTTACCAGACCTTTAAAAAAAAATCAATTCAGTTCATTTCAGTCTCTCAGTCGTGTCCGACTCTTTGCAACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCATTTCCCGGAGTTCACTGAAACTCATGTCCATCAAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTATTGGAGTTTCAGCTTTAGCATCAGTCCTTCCATGAACATCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTTGAGATGAATGCAATTGTGTGGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACGTTTTCCAGTCCTGTGGGCACTGCTGAGTTTTCGAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGAATCATCTTTCAGGATTTGAAATAGCTCAACTGGGATTCCATCACGTCCACTAGCTTTGTTCATAGTGATGCTTTCTAAGGCCCACTTGACTTCACATTCCAGGATGTCTGGCTCTAGGTCAGTGATCACACCATCGTGATTAACTGGGGCATGAAGATCTTTCTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCGTCTGCTTCTGTTAGGTCCATACCATTTCTGCCCTTTATCGAGCCCATCTTTGCATGAAATGTTCCCTTGGTATCTCTAATTTTCTTGAAGAGATCTCTAGTCTTTCCCATTCTGTTGTTTTCCTCTATTTCTTTGCATTGATCGTTGAGGAAGGCTTTCTTATCTCTCCTTGCTATTCTTTGGAACTCTGGATTCAGATGCTTACACCTTTCCTTTTCTCTTTTGCTTTTTGCTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTCCTCAGACAGCCATTTTGCTTTTTTGCATTTCTTTTTCTTGGGGATGGTCTTGATCCCTGTCTCCTGTACAATGTCACGAACCTCCATCCATAGTTCATCAGGCACTCTACTTCTCACTTACACTGTATAATCGTAAGGAATTTGATTTAGGTCATACCTGAACGGTCTAGTGGTTTTCCCTACTTTCTTCAGTTTAAGTCTGAATTTGGCAAAAAGCGATGTTTAAATAATATTCTCTTAAAATCCTCACTACAACCTAGATAATATTTCCCCAGTTTACAGGTGTGGAACATGATGCTGACAGAATGGTTTGCTAATGAGTGCAGGGGAAAAGGGAGCCCTAGAACTCCTTTAGCCTTCCTAAATCCACGCCATCCTGTTGCACTTGAAGATTAGTTGCATGTCTCCTAGTAATGCGTCGTAAGAAGTCAGGTGCTGCTGCTGCTGCGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACTGCAGCCCACCAGGCTCCCCCATCCCTGGGAGTCTCCAGGCAAGAACACTGGAGTGGGTTTCCATTTCCTTCTCCAATGCATGAAAATGAAAAGGGAAAGTGAAGTTGCTCAGTCGTGGCAGACTCTTAGCGACCCCATGGACTGCACCCTGCCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGAGTTGCGGTTGCAAGAAGTCAGCTGCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCATCCCACCAGGCTCTCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGTTTGCCATTTCCTTCTCCAATGCATGCAAATGAAAAGGGAAAGTGAAGTTGCTCAGTCGTGTCCGACTCTTAGCGACCCCATGGACTGCAGCCTGCCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACCGGAGTGAGTTGCCATTTCAAGAAGTCAGCAGAAAGCACTAAAGGCGGGCTTCGCCACCTGACCCACACTTGCCCGAATCCCCTGCAATCGATGACGGCGGCGAGCAGCTAAGGAGCGCCGAGGTGGTCGATCGGCCCTTGGGTTTGGCGTGCGCGTGCCGGAGGAGGTAACGCCGCCACGCGCGGACGTGTGCGCCGTCGCCATAGCGACTGCCCCTGGCAACCGCGAAGCCCTGCAGGCCGCGGGCGAGCTAGCGGCTGGGGCTGTCCGCGCCTCCGTTCGCCTTCGTCCTCCGGCTTTATCCGTCGTTCGCTCTTGCCGCCCGCCCTCTCCGGTCCTTCTCTCCGGAGTCATGGCCGGCGTGCCCGGGGACGTGCGGAAGCTCTTCATTTTCGCCACTACTCGGAACTATTTCGGGCTGGTGTCGGAATCCTGGGACCATGCGCTGCTGGGCAACGGCCCCGAAATCAACAACTTTTTGGACGACGGGAACCAGATGCTCCTCAGAGTGCAGCGATCCGATTCCGGCATCGCCTTCTCCAACGTGATTGATTTTGCTGACACAAAAGATAAAGTGCTGGTGTTTTTCAAGCTGCGACCCGAAGTAATTACTGATCAAAATCTACATAATAATATTCTTGTTTCATCTATGTTAGAATCACCTATTAATTCCCTTTACCAAGCTGTCCGGCAAGTATTTGCACCAATGTTACTAAAGGATCAGGAATGGAGCAGAAACTTTGATCCCAAACTTCAGAACCTTTTGAGTGAACTAGAAGCTGGTTTGGGTATAGTTCTACGAAGATCAGATACTAACTTATCAAAACTGAAATTTAAGGAAGATGACACACGAGGTATTCTTACACCAAGTGATGAGTTCCAGTTTTGGATAGAACAAGCTCATCGTGGAAGTAAACAGATTACCAAAGAAAGAGCCAGTTATTTTAAAGAATTATTTGAAACAATTGCAAGAGAATTTTATAACTTGGATGGTCTGTCCTTATTGGAAGTGGTTGACTTGGTGGAGACAACTCGGGATGTTGTAGATGATGTGTGGAGACAAACAGAACATGATCATTATCCCGAATCACGAATGTTACATCTCTTAGATATTATAGGTGGTTCATTTGGAAGATTTGTTCAGAAGAAGTTGGGAACGTTGAACCTCTGGGAAGATCCTTATTACCTTGTGAAGGAAAATCTGAAAGCTGGTATTTCAGTTTGTGAACAGTGGGTGACTGCCTGTAGTCATCTGACAGGTCAGGTGTGGCAGCGCTACGTTCCTCACCCGTGGAAAAATGAAAAATATTTTCCGGAAACACTTGACAAGCTTGGCAAACGCCTTGAAGAGGTCTTGGCTGTTAGAACAATTCATGAGAAACTTCTCTATTTTTCACCTGCCAGTGATGAGAAAATCATATGCCTGGCTCGAGTATTTGAACCTTTTTCTGGCTTGAATCCTGTGCAATATAATCCATATACCGAGCCTTTATGGAAAGCTGCAGTGTCTCAGTATGAAAAAATTATTGCACCTGCAGAACAAAAAATAGCAGGAAAATTGAAAAATTATATTTCAGAAATTCAGGACAGTCCACAACAGCTTCTTCAAGCATTTCTGAAATATAAAGAGTTGGTGAAGCGTCCAACCATAAGCAAAGAATTGATGCTAGAAAGAGAAACTTTACTGGCAAGACTTATGGACTCAGTTAAAGATTTTCGATTAGATTTTGAAAATCGATGCCGTGGGATTCCTGGTGATGCATCCGGACCACTTGCTGGCAAAAACCTTTCTGAAGTTGTCAATAATATAGTTTGGGTTCGCCAGCTGGAACTGAAGGTGGATGATACTATCAAGATTGCAGAAGCTCTTTTATCTGACTTGTCAGGGTTTCGATCTTTCCATCGAAGTGCTGAAGATCTCTTAGACCAGTTTAAACTATATGAACAAGAACAATTTGATGATTGGTCCAGGGATATTCAGTCTGGTTTGTCTGATTCCAAATCTGGTTTGTGTATTGAGGCTAATAGCCGAATTATGGAGTTGGATCCTAATGATGGATCATTAAAAGTGCATTATTCAGATCGGTTGGTGGTTCTTCTGAGAGAAGTTCGTCAGCTTTCTGCACTTGGTTTTGTCATTCCTGCCAAAATACAGCAAGTTGCAAACATTGCACAGAAATTCTGCAAGCAAGCAATTATTCTGAAACAAGTGGCACATTTTTACAATTCTATTGATCAACAGATGATTCAAAGTCAGAGACCAATGATGTTACAATCTGCCTTAGCGTTTGAACAGATAATTAAGAATTCAAAAGCAGGAAGTGGGGGAAAGTCACACATTACTTGGGATAATCCTAAAGAATTAGAAGGCTACATCCAAAAACTCCAAAATGCTGCTGAACGACTTGCCACTGAAAATAGGAAACTGAGAAAGTGGCACACTACATTTTGTGAAAAGGTGGTAGTTCTTATGAACATTGATTTGCTTCGGCAGCAACAGCGGTGGAAAGATGGATTACAAGAATTGAGAACTGGCTTAGCAAGTGTAGAGGCTCAGGGGTTTCAAGCAAGTGACATGCATGCGTGGAAACAGCACTGGAATCATCAAGTGTACAAAGCTCTGGAGCATCAGTATCAGATGGGCTTAGAAGCACTTAATGAGAATCTGCCAGAAATAAATATAGATTTAATATACAAACAAGGACGGTTGCAATTCAAGCCTCCTTTTGAAGAAATTCGAGCTAAATATTATAGAGAAATGAAGAGATTCATCAGCATTCCTAATCAGTTTAAGGGAGTGGGTGAAGCAGGAGATGAATCTATTTTTTCTATTATGATTGATAGAAATGCAAGTGGATTTCTGACTATTTTCAGCAAAGCAGAAGATCTGTTTAGGAGATTGTCAGCTGTTTTACATCAGCATAAGGAGTGGATTGTAATTGGGCAAGTTGATATGGAAGCTCTAGTGGAAAAGCATCTTTCTACGGTACATGATTGGGAGAAAAATTTTAAAGCACTGAAAATAAAAGGAAAAGAAGTAGAACGGCTTCCAAGTGTGGTCTTAGTTGCAGCATGCAGGATCTTCATAGAAGCATAGAATCTTAGTTACTCTGCCATCTGTGGCATCTTAGTTCCTGGACCGGGGATTGAAC EMBV3_25684 TGATGTGAGCACTGTTAAAGAGCTGTGCAGGGCACTTGATGACATTAGCGAAAGCATCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13879 CACGTGGGGAAGAGAAAGACAAGGAGACCAAGAATGCCGCCAATGCCTCCACATCCAAAT Gene GeneID:514739|MAP1B:XM_002696266:56_cdna UTR3_Alt 2 NULL GeneID:514739 20 GENE MAP1B NULL microtubule-associated protein 1B EMBV3_39829 GAGCGGTTTTTTAATCAACAAGTGGAAGTTTTGGGCAGACGTGCAGAGCCATTGCCTGAG Gene GeneID:654401|ZPBP:NM_001038611:11_cdna Constitutive 0 NULL GeneID:654401 4 GENE ZPBP NULL zona pellucida binding protein EMBV3_32950 TCACGCTAATTGGGAGCTCTATGAAGGGGTTAAAACGCTGTCCATTACAAGTCGGGTGGC Gene BVT0102_089799 + 0 NULL GK000024.2:3762668-3840016 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41401 CTGGTTAGGGAACTAGATCCCACATGCTGCAACTAAGATTCTGGCACAGCCAAATAAATG Gene BVV0102_006857 + 0 NULL GK000007.2:45816929-45838684 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41602 GAGGATATGCTGGGTGCTGGTCGCAGTCCCCTATGTTTACAGTGCCTCCGTTTCTCTAAT Gene GeneID:520399|LOC520399:XM_002693672:300_cdna Constitutive 0 NULL GeneID:520399 15 GENE LOC520399 NULL similar to Olfactory receptor 1056 EMBV3_15124 CGGCTGGCAGAATTGCACTAATGAAGCCCCCAACCTGTACTTCTCTAGCTGGTGTTCACA Gene GeneID:512750|UBE3B:XM_002694536:480_cdna UTR3_Alt 2 NULL GeneID:512750 17 GENE UBE3B NULL ubiquitin protein ligase E3B EMBV3_34131 ATTTGATCGTCAGGCAGAGATTACCAGACTTCTGCTGGAGGGAATCAGCAGTACACACGC Gene GeneID:533918|SH3GLB1:NM_001077993:65_cdna Constitutive 1 NULL GeneID:533918 3 GENE SH3GLB1 NULL SH3-domain GRB2-like endophilin B1 EMBV3_09856 GAGAACATCACCGTGGTGAAGGGCATCCGGTTTCTGATGAAGAATTGAAAAGAAGAGTGG Variant GeneID:616477|CHCHD3:NM_001035475:24_cdna 234^321 1 EMBV3_06831 GeneID:616477 4 GENE CHCHD3 MGC127388 coiled-coil-helix-coiled-coil-helix domain containing 3 EMBV3_03733 TCCCCCTATCACCTCTATTACGGCGCGTCCTCGGGCTCCTACCAGTTCTCCATGACGGCC Gene GeneID:617389|RUNX3:XM_002685770:576_cdna Constitutive 0 NULL GeneID:617389 2 GENE RUNX3 NULL runt-related transcription factor 3 EMBV3_00849 CCCAAACTTCACTCTGGAGGGACATGAGAAAGGTTCAGAAGATGGAACTGTGCGTATTTG Variant GeneID:281706|COPB2:NM_174281:3_cdna 639^818 1 EMBV3_03515 GeneID:281706 1 GENE COPB2 NULL coatomer protein complex, subunit beta 2 (beta prime) EMBV3_35883 ACTCTCACTGTTTGCAGATGGCGTGATCCTTTACATAGAAAACCTTAAAGACTCCACCAG Gene BVV0101_068705 + 0 NULL GK000006.2:32972166-33228240 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008252 TCONS_00135549 TCONS_00234011 TCONS_00249014 TCONS_00110811 TCONS_00206765 TCONS_00196914 TCONS_00250727 TCONS_00049220 TCONS_00208545 TCONS_00125102 11 XLOC_003810 XLOC_081772 XLOC_143490 XLOC_151957 XLOC_066713 XLOC_125286 XLOC_118579 XLOC_153670 XLOC_029351 XLOC_127058 XLOC_076644 Coding TCONS_00249014 XLOC_151957 Coding Coding - X:5085884-5087868 - TSS186235 1984 1 TCONS_00249014_2 465 0.999495967741935 1 0 1.50869664103505e-05 2.532362871684e-06 7.57951926010809e-06 4.1855556236221e-06 3.11062227193393e-07 5.9311351089304e-05 3.67421620407293e-06 2.98120728946199e-06 6.36301668268418e-05 1.561780990372e-05 0.000123167935736957 6.82629656871442e-05 6.50796440713859e-06 1.80786265879003e-05 7.18803983816966e-07 0.000433003660090987 0.00022313994968378 0.000117484219417848 3.61437640473593e-06 5.0720005197563e-05 1.848876644088e-06 0.000318778830912204 0.000367195759666594 0.000169903208136357 3.49217807643122e-06 1.15412129908522e-05 1.20706294168784e-05 0.000106036411424888 0.000173030354525572 0.000162944963149088 XR_236034.1 LOC101902035 PREDICTED: Bos taurus uncharacterized LOC101902035 (LOC101902035), 3e-56 224 70.64 0.23991935483871 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 971 71.51 0.994959677419355 TCONS_00249014_2 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 0.0 613 64.66 0.995698924731183 1 coding 1 0 1 1 0.0734426552178208 0.628118013922832 0.00764513288291539 0.878520266287245 TAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAATGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCATCCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATTGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATCTGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATAAAAGTTTGCATAGAAACGAATGAAAATGAAAACACAACAACCCAAAACCTATGGGACACGGTAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAACCACAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAATTTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCAGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCAGAAAGTTGCAGAGGAAGGTAAACTTCCAAACTCATTCTGTGAGGCCAACATCACCCTAATACCAAAGCCTGACAAAGATCCCACAAAAAAAGAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAATACCCTTAACAAAATTCCAGCAATCAGAATCCAACAACACATTAAAAAGATCATACAACATGACCAAGTGGGCTTTATCCCAGGGATGCAAGGATTCTTCAATATCCGCAAATCAATCAATGTAATACACCACATTAACAAATTGAAAACTAAAAGCCATATGATTATCTCAATAGATGCAGAGAAGGCCTTTGACAAAATTCAACATCCATTTATGATAAGAACTCTCTAGAAAGCAGGAATAGAAGGAACATACCTCAACATAATAAAAGCTATATATGACAAACCCACAGCAAACATTATCCTCAATGGTGAAAAATTGAAAGCATTTCCTCTAAAAACAGGAACAAGACAAGGGTTCCCACTTTCACCATTACTATTTAACATAGTTTTGGAGGTTTTGGCCACAGCAATCAGAGCAGAAAAAGAAATAAAAGGAATCGAAATTGGAAAAGAAGAAGTAAAACTCTCACTGTTTGCAGATGACATGATCCTCTACATAGAAAACCCTAAAGACTCCACCAGAAAATTACTAGAACTAATCAATGACTATAGTAAAGTTGCAGGATATAAAATCAACACACAGAAATCCCTTGCATTCCTATACACTAATACTGAGAAAACAGAAAGAGAAATTAAGGAAACAATTCCATTCACCATTGCAATGGAAAGAATAAAACACTTAGGAATATATCTACCTAAAGAAACTAAAGACCTATACATAGAAAACTATAAAACACTGGTGAAAGAAATCAAAGAGGACACTAAT TCONS_00246191 . 5' 26441 TCONS_00246191 . 5' 26441 EMBV3_15314 CACAGCCAGAGGAATCACTGTCCACAAGCCCTCAGGTGTTTCCATTCTCGTTTAAGGGAC Gene GeneID:512789|ZFP36L2:NM_001015582:56_cdna Constitutive 0 NULL GeneID:512789 27 GENE ZFP36L2 MGC137964 ZFP36L2 zinc finger protein 36, C3H type-like 2 EMBV3_21081 CTGCCCTCTGACCAGAGCTTAGAAGATTTTAGTGACTCTTCAATTACCTGTGGAGCTCCC Gene GeneID:614942|TRAT1:NM_001163943:113_cdna UTR3_Alt 1 NULL GeneID:614942 1 GENE TRAT1 NULL T-cell receptor-associated transmembrane adapter 1 EMBV3_35357 GCATGGTCGACAGCGAGCACACGGCCTGGATCGCGCACTCGCTCGCCTGGTCCTTCATCT Gene GeneID:781184|CACNG1:NM_001080337:34_cdna Constitutive 0 NULL GeneID:781184 19 GENE CACNG1 MGC143418 calcium channel, voltage-dependent, gamma subunit 1 EMBV3_41516 GTACCGTCGAAGCTATGACTCTGATTTCACGGCTCCCTTGGTCTTCTATCATGTGTGGCC Gene GeneID:615729|SPATA18:XM_002688270:14_cdna Constitutive 0 NULL GeneID:615729 6 GENE SPATA18 NULL spermatogenesis associated 18 homolog (rat) EMBV3_39391 TCCAGGCTGACCAGGGAAAGTCAAGAGCATCCTTGTGGGAAGGATACATGCAAGTCTTCA Gene BVT0102_347589 + 0 NULL GK000001.2:146583244-146705612 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011734 1 XLOC_007285 NonCoding TCONS_00011734 XLOC_007285 NonCoding NonCoding - 1:146593551-146594033 - TSS8811 482 2 TCONS_00011734_2 44 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000247433730637734 0 0 0 0 0 0.000171220298418759 0.000698518606302475 0 noncoding 0 0 0 0 -0.00284668642897706 0.981401212150697 0.0186088886079239 0.687602368313184 CTCCATCTATAGACCGAATCTATGATGCCAGTAAACACACTAGGAAAACGCAGATGTTGCCAGGACTGTGCTGGAAGAGTGATGATCTCAGGGAACCCGATTTGATCCTAAGGACATCACAGGACCCCAGAGGACTCGAGCAGGAGCAAAGGCTGGACGCCACCCGCCCCCGTGTCTCCTGACCTCCAGGCTGACCAGGGAAAGTCAAGAGCATCCTTGTGGGAAGGATACATGCAAGTCTTCAAGTGGGGAAACACTGAGGTCATCGGGGTTTATTGTACGATTCTTTCTTCTTTCATCTGTTTGAGATTTACATGCTTCTCCGTGAGAAGGAAAAGAAAGCTTTGGAAAACATCATTTTCGTGATTTCTCTTTTATTGCCACGTTTGGAAATGGGATGTGTTTAAAAAGCCAAGCATTTACATGAAAACAAAGTAGATCAATTGGTTATATTATGTTGTAAAATTAAAATCATTTTGCTT TCONS_00002509 TCONS_00002508 . 3' 10309 TCONS_00002509 TCONS_00002508 . 3' 10790 EMBV3_36875 CATCCCAGGACTTAACCTGTATTTCTTGCATTGGTATGTGGGTTATTTACCAGTAGCACC Gene BVV0102_220266 - 1 EMBV3_21006 GK000005.2:37328200-37433923 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05136 TGGCTGGCATCAGTCTAGCACAAGGGATATTCTAGGTGTGGCATGTGGGATCTAGTTCTC Gene BVV0102_076943 + 0 NULL GK000013.2:54079413-54123571 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31282 GCTGGCTAACCGAGTGGCGGGACGAGGCAGCCAGTCTGTGCGGGACGTGTTTGCCAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12772 CCCGGACGCCCTTCGACAGGTGTTAATAAGCCACTAGGGCGCAGCACAGTGCCAGTTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14276 ATCAGTCAAACACACATTAAAGCTAATCCACCCAAAGCTGGAGTACCAGTTGCTTTTGGC Gene GeneID:100138953|BBS7:XM_002688024:2_cdna Constitutive 0 NULL GeneID:100138953 6 GENE BBS7 NULL Bardet-Biedl syndrome 7 EMBV3_00396 GATGCCACATGGGGGTTTGCCACTGATACCCCTGGGGAACATTTCTGTAAATACCATGGA Gene GeneID:616888|MYCN:XM_002691523:544_cdna Constitutive 0 NULL GeneID:616888 11 GENE MYCN NULL v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) EMBV3_01844 TGTGTGGAGCCCCAGATCACCCCTTCCTACTATACCACCTCGGATGCTGTCATTTCTACT Gene GeneID:504438|SSR4:NM_001038503:34_cdna Constitutive 0 NULL GeneID:504438 X GENE SSR4 MGC133642 signal sequence receptor, delta (translocon-associated protein delta) EMBV3_10316 TACCTGAGAGACTTGTGTGACCAAATGAGATGACTTGAATAGTTCCCTCTTGTGGGGAGC Gene GeneID:281177|FUT8:NM_177501:14_cdna Constitutive 0 NULL GeneID:281177 10 GENE FUT8 MGC129067 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) EMBV3_40605 GCGCTGGAAGGAAAAAGGCCTGTATCCTATCAACACTTATCTAGCAGCATGCTGCAAAAG Gene GeneID:507766|ZNF217:XM_002692361:228_cdna Constitutive 0 NULL GeneID:507766 13 GENE ZNF217 NULL zinc finger protein 217 EMBV3_29318 CTTAGTCCTGAGGATCAGACACATCCTGACAATCTTGTTGGTCTGTGGAGGCGGGATGAA Gene GeneID:539441|SARG:NM_001098464:94_cdna Constitutive 0 NULL GeneID:539441 16 GENE SARG C16H1orf116 MGC155114 chromosome 1 open reading frame 116 ortholog EMBV3_17956 CTCAGGCCTTATAAAACCATGCCAAACTATCTTAAAGAAAAAGGTTTTGATGTTCATTCC Gene GeneID:540619|RHOJ:NM_001083498:199_cdna Constitutive 2 NULL GeneID:540619 10 GENE RHOJ MGC143367 ras homolog gene family, member J EMBV3_15138 CAGAAGGAATGAGCTTTCTTCGTGCTGCAGAGCTGGGAGCAGTGGGTAAAAGTTGCAGAA Gene BVT0102_013411 + 0 NULL GK000026.2:20524925-20533687 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151715 TCONS_00151716 TCONS_00150369 2 XLOC_092174 XLOC_091860 Coding TCONS_00150369 XLOC_091860 NonCoding NonCoding COX15 26:20529933-20537752 x TSS112660 2919 1 TCONS_00150369_4 99 0.176087701267557 2 0.626886671783065 0.000945019790291032 0.000282200747315325 0.000207066279313198 0.000124853813959092 7.26786962284763e-10 0.000886973804915227 0.000538596085764281 0.000336602665822037 0.000617047388300947 8.80166018087739e-14 2.55009169774087e-05 1.88240525224948e-12 2.00927820634668e-23 3.84191625349072e-05 7.41994194222308e-05 0.0018600879128663 0.000136476655230275 0.00233274840233665 0.000430138060868081 0.00062397019881818 0.000401386745094983 0.0023539724456514 0.000478534106682632 0.000393980676048105 0.000686141370843878 0.000308026784090802 0.000311529313395734 0.000208426085248845 7.15382312054548e-08 0.00023583756505153 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 9e-58 230 88.46 0.0620075368276807 NM_004376.5 COX15 Homo sapiens cytochrome c oxidase assembly homolog 15 (yeast) (COX15), transcript variant 2, mRNA. 1e-131 475 71.53 0.325111339499829 0 noncoding ATATTTATGTTTCATTCCCCCTCTAATATTTCACTATTTCTCATTATTATTATTAGAGGGACAAAGGAGGAATACATTTGTTGACTTTCTCTGCAAGTCTGAGCAATAATATCGTTTAATTGGAAAACTGAATCATTATTAGAGGGACAGAGGAGGAATACATTTGTTGACTTTCTCTGCAAGTCTGAGCAATAATATTGTTTAATTTGGAAAACTGAATCATTACCCATACTACAAGGGCTTTCTACATTTAAAATGTATTCAATCATTGCTTGCCATTTTTATGACGACCAAAGTTGAAAAAAAAATTTGAGAGTCCCAGGATGAGTATAGCCATGCATGCACGATGACTTCAGGCAAGCCAAGGCTCTCCTTTTTAAGTAGTGCAGCCACTCATAGGTCTTCTGGCAGCTGATCACTCCTCTCCACTTCTTCAGGTAAGGCAGCCCCGAGACTTTCTGAAGCAGCCCCTCCTACAGAGCACCTGCCAGTTGAGCCTGTTAGAACTGCTGGTGGTGAAGGCTCTGCCCCCTAATTAGCTTCGTAAAAGTCTTTCTCTGCAGGCAAGAATCGCAACCACTTTGATTTCTGGAATTTGTTGTTGTGTTTGAAATTTTTATTCTATAATCCCCCTTTAGCTGAAGCCTTTAAGTATACACCTTGTCTCCTCCATGAAATCTGCCTTGAGCATGAGATCCTGCAGTGCTGAAAGGCATCTTTTTATTACGACCTCAATGAAAAACTCCCTTCTTGCTTTCAAAAACCAAAGGCTGCCTGTATGGCATTACTTTGGGTGGGTGGGGGGTTGCTTAGTTTGTATGTTTTTCTAACACTTAACATTAAATAATAGTTTTGCTGAACAGTTATTGAAACTCTGATACTGTTAAGTCAGTGTTGAACAGAATACACAATACATATTAGAGAGGGGTGCATTGTCCCTTATGCAAGGACATGGGTATATATGTTATATATACCAGTATACAACCCACCATCATGCCAGGACCATAAGAACTGCTGCAGATAAACTGGTTATCCTACTATTGTGATCATCAGTGTTGGTCTTTGCAGCAAGCATCACTTTTTGTTGTTGTAAGTTGTTGTTGGACTCTTGCAAACCTCATGGCCTGTAGCCTGCCAGACTCTCCTGTCCATGGGATTTCCCAGGCAAGAATCCTGGAGTGAGTTACCATTTCCTTCTCCAGGGGAGCTTCCTGACCCAGGGATTGAACCCAAGTCTCCTGCATTGGCAGGCAGATTCTTTACCACTAAGCCATCAGGGAAGCCCAGCATCACTTTAGGCAGTGGCTAATAATAACCCTTGCCACAATGGACAGCATTTGTCTAAGTTAAACAAAAGATATTCTGCATTAATTAAGAAAGCGAGGGATTTTAATTTCCTTTGGTATTTTAAAACCAACTGACAGAATTGTTGGCTTTTGAAAATATTAAAGGAAATGCATTTCATCTTCTGGGTATGATGACTTAATTTGAAAGCAGTGTCTGGGACATCAGTCTGTAATCATCCATTTTCCATTTATTCATACAATATTTGGTGGTATGTGTCTGGTGCTGGGAATAATGCAAACAAAATAATTCAGATAATATCCACTCACCAGGAGCTTAGAGATGGGCATTAACAGTTATATCACTAAATGCAATCAGATCTGTTTTTCCAAACTTACTCATCTTTAATAAAAAAAAAATGAAGTAAAACATCTGCAACTTGAAATTATTTAATTCATTTCATGCTTTTTTTTTGGCGGGGGGGTGGGGGGAAGGAACAATAGCATCATTAGCATATGGTTGAGCTGGATCAGACTGCCCTCTCCAGACTCAATTATTAACTAAGAACAACCTTAATTTGGGGATCAGGAGATGATAGTTTGGGAACCTGCCCAGTGACTGCAGCTGTCTTTCTTTAGAGAATTCTATCTGGAAGAGGTGATACCCCGCTGGCGCACTAACCAGTATCAACACAGTGGATAAATGAGATAGGGTGAGGTGGAAATTTGGAGGGAATGGGAATAAGCTGCTCAGAACTTCTAACGTAAGTAGGCTACTAGGGCTACTAGTGGTTCCCAAACTTGTCAGCACATCAGAATCACCCAAGGAATTTGCTAATTATGGCTTTCAGAGATTGTGAATTAACTGATCATTGCTAAGGCTAGGGTCAGGATTCTGAAAGATTCTAATGTGAGAGAAGCTGGGAACCACTTCTGGGAACAGCAAAAGCTGTTTCCTGGCCAGGATTTTTATTAACAAAAAAATCAAAGACAAACTGCTACTTCTATTTTGTTAAGAACCACTTGAGGATGATACACTGTTGGTCACACTGAAACCCAGAGGATACTGGAGTTGAAAGGGAACTGTGATCATTAGTCTAGCAGCTGTACAGGGGCACATCTTAACGTCATTTATGGCTCCCAGATCTGTTTAGCCTGCATAATGTTCTAAAAAACTTGAGACCATTCACATAAAAATCTGGATGTTTGGTTTGTCTGAAAAGTCAGATCTCACAACTGGACCCGCAGAGCAGCAACAGGTTAGCACTCAGCAGAGGTTTAGCCCCTTGACGGGCACCTGCTCTCTGGTTCACCTGTTTGCACCAGCCTGCCCTAGCAGGCATCTGATTTGGTCCAGGTGGCTCCTACCTTCTACAAAACTAAAAACTAACTTTCTGCAACTTTTACCCACTGCTCCCAGCTCTGCAGCACAAAGAAAGCTCATTCCTTCTGCAAGAAGGGGCTTCAACTTGTCAAGGGCAGGATTCTTGCTGTCTCTCTAAATGTTCTCCAGCCGAATACTCCTAGTTCTTTCAAGTATTCCTGGTATGAAACGGGTTCTGGACTCCTTGCTGTCCTGGTTCCTGCCTCTTGATACATACATGCTGCACTCAACATCATCTGGCATGTTATGGGT TCONS_00151715 r 5' 0 TCONS_00151715 r 5' 0 EMBV3_39097 GAACTATGGACAGAGGTTTGTGACATTGTATAGGAGACAGGGAGCAAGACCATCCCCAAG Gene BVT0102_002636 - 1 EMBV3_27234 GK000007.2:75539457-75703750 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178770 TCONS_00252153 TCONS_00017658 TCONS_00188712 TCONS_00066197 TCONS_00031400 TCONS_00167835 TCONS_00009350 TCONS_00188878 TCONS_00099336 TCONS_00131937 TCONS_00198269 TCONS_00208722 TCONS_00021541 TCONS_00047887 TCONS_00038157 TCONS_00254205 TCONS_00209797 TCONS_00039511 TCONS_00231294 TCONS_00185761 TCONS_00057947 TCONS_00106693 TCONS_00170142 TCONS_00141164 TCONS_00123871 TCONS_00111187 TCONS_00050906 TCONS_00156644 29 XLOC_108543 XLOC_155094 XLOC_009078 XLOC_114753 XLOC_040914 XLOC_017648 XLOC_102671 XLOC_004906 XLOC_114919 XLOC_059579 XLOC_080642 XLOC_119926 XLOC_127234 XLOC_012214 XLOC_028019 XLOC_021983 XLOC_157139 XLOC_128308 XLOC_023328 XLOC_140783 XLOC_111814 XLOC_035744 XLOC_062871 XLOC_103517 XLOC_085592 XLOC_075423 XLOC_067087 XLOC_031026 XLOC_095104 Coding TCONS_00066197 XLOC_040914 Coding Coding - 15:79122705-79126065 - TSS49940 3360 1 TCONS_00066197_4 349 0.890773809523809 1 0 0.000911153571227853 0.000396660595781436 0.000808550708571659 0.000365669252733443 0.000460583426380235 0.000148009451597228 0.00033733937740547 0.000251976791589605 0.000381728282766778 9.79639190752363e-06 3.37529560572635e-06 6.38515326597364e-06 2.29805308375844e-06 0.000155605029451023 9.34135482616659e-06 0.000401484147846331 4.82777637654535e-05 0.000183641428583496 0.000603485779049651 0.00065904508928035 0.000225504961841281 0.0002149198492707 0.000107914220043369 0.000342435539939148 0.000403211440868158 0.000207167338496405 0.000243464843346009 3.57313841942007e-05 4.26976801010356e-06 4.45401595401468e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 2241 91.61 0.462202380952381 TCONS_00066197_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-21 97.4 22.96 0.97134670487106 1 coding TGTTTTTGTTTTTTTTTTTCAGTTTTGCCAAGAAAATGCACTGGTCATAGCAAACACCCTCTTCCAACAATACACGTGGACATCATCAGATGATCAACACCAAAATCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAACAAAAACAGGACCAGGAGCTGACTATGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTGAAGAAAATAGGGAAAACCAATAGACCATTCAGGTATGACCTTAATCAAATCCCTTATGATTATACAGTGGAAGTGAGAAATAGATTTAAGGGCCTAGATCTGATAGATAGAGTGCCTGATGAACTATGGACTGAGGTTTGTGACATTGTACAGGAGACAGGGATCAAGACCATCCCCATGGAAAAGAAATGCAAAAAAGCAAGATGGCTGTCTGGGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGCGAAAAGCAAAGGAGAAAAGGAAAGATATAAGCATCTGAATGTAGAGTTCCAAAGAATAGCAAGGAAAGCTAAGAAAGCCTTCCTCAGCGATCAATGCAAAGAAATAGAGGAAAACAACAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCTCGATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAAAGATCTTCATGACCCAGATAATCACGATGGTGTGATCACTCATCTAGAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGAAAATTTGGAAACCTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGCTCAAACTACCGTACAATTGCACTCATCTCACATGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGAAATACGTGAACCTTGAACTTCATGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAAATCAAATAGCTAACATCCACAGGATCATCGAAAAAGCAAGAGAGTTCCAGAAAACCATCTATTTCTGCTTTATTGACTATGCCAAAACCTTTGACTGTGTGGATCACAATAAACTGTGGAAAATTCTGACAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCTGTATGCAGATGAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGCTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAATCACTGGACTGGAAGAAGCACAAGCTGGAATCAAGATTGCTTGGAGAAATATCAATAAGCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTCAAAAGCCTCTTGAGGAAAGTGAAAAAGTTGGCTTAAAGCTCAACATCCAGAAAACAAAGATCATGCCATCTGGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTTCTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGGAAGGTTATGACCAATCTAGATAGCACATTCAAAAGCAAGACATTACTTTGCTAACAAAGGTTCGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTTTGGATGTGAGAGTTGGACTGTGAAGAAGGCTGAGTGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGACACTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGGGAAGAGTTGACTCATTGGAAAAGACTGTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCAATGGACATGAGTTTGAGTGAACTCCGGGAGTTGGTGATGGACAGAGAAGCCTGGTGTGCTGCGATTCATGGGGTCGCAAAGAGTCAGAGACAACTGAGTGACTGAACTGAACTGAACTGAATTGCTTTACAATGTTGCATTGGTTTCTGCCATGCTGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGGGACCTCATAGACAGCAGCCCACCAGACTTCCCCGTCCCTGGGATTCTCCAGGCAGGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAAGGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCTAGCGACCCCATGGCCTGCAGCCCACCAGGCTCCTCCGTCCATAGGGATTGTCCAGGCAAGAGTACTGAAGTGGGTTGCCACTGCCTTCTCTGGGTTTCTGCCATACAATAATGCAAATCAGCCATAAGTGTATAGATATATATCCCCTTCCTCTTAGGCTTCCCGCCCACCCCCTGCCCCCATCCCATTCGTCTAGGTCATCACAGAGCATCGCTGGGCTGAACGACCACCACAGAGCAGCTTTCCCTAGCTATTTTACACACTCTTTTGCAACATAAAGGGTAATGGTTAATTCAGGGTTTTCACTCTCAAAAGCACTTGCATTAAAGTCTTTAAAATGATGTTAAAATGTATAATATTTTCTCCTTAATCATTAGTTAAAACTTGGCATCTCATTAGAACTTTAATCAGCGTTGAATTAATGACATCCTGAATAGCACTGGTCTAGAGCACACTGAGCTTTCAAAGTGCCATTGTGGCACTGGTGAAAGCTTTCACTACAAAAATTTTAATACATATTCGGGTGTGGTCAAGACAGATTAATATAATCACATGTAACCAAAATCCAGCTTGAATAAATACTGCTTTGGACAAATTTTGTTTCCTCTTGAGCAGGGTATCTCAATAGCAGTAGTATTGTTGCTCTGGACTCAGGTAACCTTTGCTGTGGGGGGCTGTCCTGTGCATTGTAAGATACTGCTCAGAATCTCTGGCCTCTTCTCACGAGTTGCTAGCAGCATGTCCTCTCCACCCAGATTGGGATGATAAAAAATGTCTCCAGATATTGGGGGACAAAAACTACCCATGATTCAAAACCA TCONS_00060199 . 3' 4688 TCONS_00060199 . 3' 8047 EMBV3_35389 GGAAGTTAGCTGAACAGTTCCCTCGGCAAGTGCTGGATAGCAAAACCCCAAAACCAGAAG Gene GeneID:788496|LOC788496:XR_084055:299_cdna Constitutive 0 NULL GeneID:788496 23 PSEUDO LOC788496 NULL similar to MGC133868 protein EMBV3_21168 ATAACTGAACGCGAGGCAGAGCCATACTATGCATTATCCAATTGGTTTGCTATTTGATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10445 GAATATAGGATCTTAGTTCCCCAACCAGAGATGGAGCCTGTGCCCCCTGTATTGGGAGTG Gene BVT0102_276253 + 0 NULL GK000009.2:96167610-96210019 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35994 ACTCTCACTATTTGCAGATGACATGATCCTCTACATAGAAAACCCTAAAGACTCCACCAG Gene BVV0102_102757 + 1 EMBV3_22812 GK000009.2:320748-406551 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251968 TCONS_00166184 TCONS_00007479 TCONS_00070843 TCONS_00152751 TCONS_00174964 TCONS_00206765 TCONS_00011316 TCONS_00152649 TCONS_00224115 TCONS_00223369 TCONS_00177993 TCONS_00135549 TCONS_00189809 TCONS_00115689 TCONS_00249014 TCONS_00079524 TCONS_00231893 TCONS_00012569 TCONS_00250727 TCONS_00208545 TCONS_00020842 TCONS_00223458 TCONS_00220661 TCONS_00254568 TCONS_00150794 TCONS_00055300 TCONS_00125102 TCONS_00251753 TCONS_00110459 TCONS_00049220 TCONS_00070959 TCONS_00157711 TCONS_00141423 TCONS_00116669 TCONS_00031936 TCONS_00070965 TCONS_00234011 TCONS_00179125 TCONS_00199631 TCONS_00250724 TCONS_00124128 TCONS_00089346 TCONS_00050119 TCONS_00188853 TCONS_00141284 TCONS_00152670 TCONS_00176142 TCONS_00012572 TCONS_00240473 TCONS_00251587 TCONS_00039852 TCONS_00032142 TCONS_00022063 TCONS_00021597 TCONS_00199036 TCONS_00012578 TCONS_00072336 TCONS_00156738 TCONS_00071183 TCONS_00196914 TCONS_00220542 TCONS_00115730 TCONS_00089141 TCONS_00054105 63 XLOC_154909 XLOC_101022 XLOC_003040 XLOC_042620 XLOC_092516 XLOC_104747 XLOC_125286 XLOC_006867 XLOC_092414 XLOC_137411 XLOC_136669 XLOC_107766 XLOC_081772 XLOC_115846 XLOC_069858 XLOC_151957 XLOC_048409 XLOC_141381 XLOC_007888 XLOC_153670 XLOC_127058 XLOC_011517 XLOC_136758 XLOC_133978 XLOC_157500 XLOC_091952 XLOC_033108 XLOC_076644 XLOC_154694 XLOC_066363 XLOC_029351 XLOC_042736 XLOC_096166 XLOC_085851 XLOC_070835 XLOC_018181 XLOC_042742 XLOC_143490 XLOC_108898 XLOC_121284 XLOC_153667 XLOC_075680 XLOC_054131 XLOC_030248 XLOC_114894 XLOC_085712 XLOC_092435 XLOC_105921 XLOC_147137 XLOC_154528 XLOC_023669 XLOC_018385 XLOC_012734 XLOC_012270 XLOC_120689 XLOC_044105 XLOC_095198 XLOC_042955 XLOC_118579 XLOC_133859 XLOC_069899 XLOC_053927 XLOC_031914 Coding TCONS_00141284 XLOC_085712 Coding Coding - 24:9003823-9004449 - TSS105495 626 1 TCONS_00141284_2 175 0.990415335463259 1 0 0 0 0 0 0 8.16304195089246e-07 0 0 0 6.57267683893068e-06 4.06315129637321e-07 8.52713044315985e-06 0 0 1.74164094161532e-06 5.53171329952151e-05 2.31237932451148e-05 0.00490680836661115 0 0 0 2.57168365795849e-05 0.000159367648675866 9.70499628246162e-05 0 0 0 0 8.61660102081921e-06 2.56112693724158e-06 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 6e-90 334 74.07 0.861022364217252 XM_005256705.1 XAF1 PREDICTED: Homo sapiens XIAP associated factor 1 (XAF1), transcript 1e-91 340 72.46 0.988817891373802 TCONS_00141284_2 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 5e-73 241 64.00 0.994285714285714 0 noncoding 1 0 1 1 -0.38980194029431 0.0634389746760557 -0.0226003958036786 0.701819564419208 TCATTTTGGAAGTTTTGGCCACAGCAATCAGAGCAGAAAAAGAAATAAAAGGAATCCAAATTGGAAAAGAAGAAGTAAAACTCTCACTATTTGCAGATGACATGATCCTCTACATAGAAAACCCTAAAGACTCCACCAGAAAATTACTAGAACTAATCAATGATTATAGTAAAATTTCAGGATATAAAATCAACACACAGAAATCCCTTGCATTCCTATACACTAATAATGAGAAAACAGAAAGAGAAATTAAGGAAACAATTCCATTCACCATTGCAATGGAAAGAATAAAATACTTAGGAATATATCTACCTAAAGAAACTAAAGACCTATATATAGAAAACTATAAAACACTGGTGAAAGAAATCAAAGAGGACACTAATAGATGGAGAAATATACCATGTTCATGGATTGGAAGAATCAATATAGTGAAAATGAGTATACTACCCAAAGCAATTTATAGATTCAGTGCAATCCCTATCAAGCTACCAACAGTATTCTTCACAGAGCTAGAACAAATAATTTCACAATTTGTATGGAAATACAAAAAACCTCGAATAGCCAAAGCAATCCTGAGAAAGAAGAATGGAACTGGAGGAATCAACCTACCTGACTTCAGGCTCTAC TCONS_00139769 . 5' 144125 TCONS_00139769 . 5' 144125 EMBV3_04099 CCTGTGGACAGAAACTCCAAAATATCAATAGTAGGACAATCGAGAGAGGAGATTGGGCTG Gene BVV0102_096440 + 1 EMBV3_19039 GK000029.2:43281243-43416169 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163837 1 XLOC_100046 NonCoding TCONS_00163837 XLOC_100046 NonCoding NonCoding - 29:43394696-43398928 - TSS122722 746 3 TCONS_00163837_2 48 0.89142091152815 2 0.824155046088395 0 0 0 0 0 0 2.00503349482701e-13 0 5.48416623283148e-10 8.88791453740028e-21 3.2014746459979e-05 3.95832462114526e-18 0.000385881153833141 0.00116997938818166 0.00247717593118363 0 0 0 0 0 0 0 2.43482147571986e-71 0 0 6.87331498230865e-10 0 7.53583947413661e-05 5.18612375512691e-27 4.75188281051949e-10 XR_237740.1 LOC101904589 PREDICTED: Bos taurus uncharacterized LOC101904589 (LOC101904589), 3e-62 242 76.74 0.455764075067024 0 noncoding GAGGGGGCGATAGAGTACTGAAGCAGGAGGCTGCTCTCCCAAGCGCAAGACATCGAGCTCTGGAAGCTAGAAAGGGCGAAGAGGAAGATTTTCCCATGAGCCTCTGGAGGGAGCAAGTCCCTGCCGTCCGCCTGATTTCAGCCCAGGAAGACACTGACTGTGACCGCTGGACCCCCGGCTGTCAGAGAAGCAGCGTGTGGTTTTAAGCCGCCACGTTGGTGGTCACTGTCCCAGCAGCAGGAGGAAACAGGAGATGTCTGTTGAATGAATAAACTGAGGCAGGAGGTAGATGCCCTCCCCTACATCCCCTGGGTGAACAACTGGAGTTCATTTCCTGTGGACAGAAACTCCAAAATATCAATAGCAGGACAATCGAGAGAGGAGATTGGGCTGTGCCAGGATAAAAAATAAGAGACCACATATCTCTCATTCTTGAAGTCAAGGAGACCTTGTTGACTAGAAAGCTCCTTGGAGGTCAAAAGAGGAATGATGCCAAGGCTACCCAGAGGCCTCTTCAGTGGAATCCATCTCGGCTGAGAGACGCATGGGCGCACACGGGAGGATCCTGAGATACACCGCAGACAGACTCAGAACCACGCAAATCGAAATAATCGGCCAAAGGAAACCTGGAAAAGATGCCCCATAAAAGTGATTCAAACTACCAGGAGGGTGTGACTCTCTCTGAGTCCGCCTCTGTGTCGGTCCACAAGTACCATACTCTTTTCCTCCTAACAAACTTGTTTCAC TCONS_00163841 s 5' 17035 TCONS_00163841 s 5' 21266 EMBV3_12814 AGAAACAGCGGTACTTGGACGAGGCTGAACGGGAGAAGCAGCAGTACATGAAGGAGCTGA Gene GeneID:507723|HMG20B:NM_001038054:185_cdna Constitutive 0 NULL GeneID:507723 7 GENE HMG20B MGC134468 high-mobility group 20B EMBV3_12303 GGATGCAGCCTGAACATGCACTGAGAAGGACAACCTAGCAAATGTTTGTGAACTTCATAG Gene BVV0102_074105 + 0 NULL GK000013.2:26526551-26772493 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042349 TCONS_00042347 TCONS_00042351 TCONS_00042353 TCONS_00042348 1 XLOC_025647 Coding TCONS_00042353 XLOC_025647 Coding Coding GPR158 13:26257740-26529475 j TSS31548 6013 1 TCONS_00042353_5 565 0.0118077498752702 10 0.97790854291329 0.00137427128529316 0.00103140146890512 0.000972008931842847 2.81041407906062e-05 0.000263750763387071 0.000244830777149032 5.69558569137137e-37 0.000362627540829873 7.85936366597982e-06 2.6297538131528e-20 4.22980749027584e-66 4.33531856824456e-05 1.62534422769075e-31 0 5.93781049800087e-06 8.78281081996807e-06 0 0 0.000679587427295504 0.00150481324489761 0.000412643646874329 9.23291899080543e-06 7.62785660659626e-06 2.50913231447071e-05 0.00114590450732662 0.000993267736778637 0.000477951262157997 1.14727367015634e-05 3.83968270486683e-09 1.99930440072592e-06 NM_001206442.1 GPR158 Bos taurus G protein-coupled receptor 158 (GPR158), mRNA. 0.0 3175 100.00 0.292532845501414 NM_020752.2 GPR158 Homo sapiens G protein-coupled receptor 158 (GPR158), mRNA. 0.0 4599 81.97 0.778978879095294 TCONS_00042353_5 sp|E1BBQ2|GP158_BOVIN GP158_BOVIN Probable G-protein coupled receptor 158; 0.0 1157 100.00 0.99646017699115 0 coding 0 0 0 0 0.126681832397415 0.430967286055479 0.0276989022372853 0.620021602307212 GTCTCTTTTTGGCCCTTGTCTTCCAGTCTTCAACCCACAAAACATCAGCCACTTCCGGGCCCTCAGCGCTTCCCAGTGGTGCCGGCTCACCGGATGTGGTAGCAGCACTTCAGCCTCAGAAGAGAGTGCTCAGGGGAACAGCGCCCAGGCTTGGCGTGGGTCTTCCCAGGCCCAAGCCCTGCCAGCGCGCATGCGTGAGGCTTTTAGTTTTTGAGCGTCTGCCTTGCACTGGAGCTTAGTGGGCTGCCGTCTATGGGGTTACACAGAGTCGGGCACAACTGAAGTGACTTAGCAGCAGCAGCAGCTTGCACTTGGCTGCATGATTTTCGCCACTCGGAGAGCTTTCTCTTCCAACTTAGTCTCGCAGACTTCCACTTCCCCTGCAGGAAGTGTTGGTGCCTTCCCGAGGGCTTTGTAGCTCCCCAGGCGCCAAGGCCCAGGTACTAATGAAGATGAGTCAGCATTGATTTCCCAGCTGGGGTGTCATGAAAGTAGACATAAATCTTCAGAAGGTGGACATTGACCAATGTTCAAGTGATGGCTGGTTTTCAGGAACTCACAAATGTCACCTTAATAATTCAGAGTGTATGCCGATTAAAGGCCTAGGATTCGTGCTTGGAGCTTATCAGTGTATTTGCAAAGCAGGATTCTATCATCCTCGAGACTTCTCATTCAACAACTTTCAGAGAAGGGGTCCGGATCACCATTTTGTAGAAAGTGCCAAGGATGTGTCAGAAGAAGTCCACGTCTGCCTGCCATGCAGCGAGGGCTGCCCCTACTGTGCTGACGACAGCCCCTGCTTTGTCCAGGAAGACAAGTACTTGCGACTGGCTATCATCTCCTTTCAAGCCCTGTGTATGCTGCTGGACTTCCTGAGCATGCTGGTGGTCTACCGCTTTCGCAAAGCCAAGAGCATCAGGGCATCGGGCCTTATCCTGTTGGAAACAATCCTTTTTGGGTCTCTGCTTCTATACTTTCCAGTTGTTATTTTGTACTTTGAGCCAAGCACATTTCGCTGTATTCTCCTAAGATGGGTCCGCCTTCTCGGTTTTGCTACTGTTTATGGAACTGTCACTCTCAAGCTTCACAGGGTTTTGAAGGTGTTTCTTTCACGAACAGCCCAGAGGATTCCATACATGACTGGTGGACGTGTCATGAGGATGCTGGCGGTAATACTCCTGGTAGTGTTCTGGTTTCTCGTTGGCTGGACATCATCTGTTTGCCAGAATTTGGAGAGGCACATTTCACTCATTGGCCAAGGGCGAACGTCAGATCACCTCATCTTCAGTATGTGCCTCGTTGAGCGCTGGGATTACATGACAGCAGCCGATTTGTTCTTGCCTCAAGACTTCAGTCTGATTGGATGTTGATGCTGTATTTTGCACATACTCATTTGACTGTGACAGTCACCATTGGGTTGCTTTTGATTCCAAAGTTTTCACATTCAAGCAATAACCCACGAGATGACATTGCAACGGAAGCATATGAAGATGAGCTAGACATGGGCCGATCTGGATCCTACCTGAACAGCAGTATCAATTCAGCCTGGAGTGAGCACAGCTTGGATCCAGAAGACATTCGGGATGAGCTGAAGAAACTCTACGCCCAGTTGGAAATCTATAAGAGGAAGAAGATGATCACAAATAATCCCCACCTTCAGAAAAAGCGGTGCTCCAAGAAGGGCTTAGGCCGTTCCATCATGAGGCGAATCACCGAGATCCCAGAGACGGTCAGCCGGCAGTGCTCCAAGGAGGACAAGGATGGTGGGGAGCACGGCTCGGCTAAGGGGTCGAGCGCGGGCAGGAAGAACCCCCAGGAGACTGCGGGTGGCTCTGGAAAGCCCAAGGAGGAGTCCCTGCGGAGCCGGGTCTTCTCGCTCAAGAAATCGCACAGCACCTATGAGCATGTGCGGGAGCAACCAGGCGGCCCCGGCAGCCCGCCCGCCCAGAGCCGGGAGGAGGAGGAGGCTACAGACAACTCTGTGCTGGGGTCTCCGGTGGGAGCGAACCGACCCCGACCCCTGCAAGAGGACAGCCAGGCTGTGTCCACTGAGTCCGTGCCTCTGGTGTGTAAGTCGGCCAGCGCCCACAACCTCAGCTCGGAGAAGAAGCCCGGGCCCACCCGCACGTCAGTATTACAGAAGTCGCTCAGCGTCATTGCCAGTGCCAAGGAGAAAACGCTTGGACTGGCCGGGAAAACCCAGGCAGCCTGCGTGGAGGAGCGGGCCAAAGCCCAGAAAGCTCTGCCCAGAGAGAGAGAGACAAATAGAAAATACTCCAATTCAGATAACGCAGAGACTCAAGACTCTGCCCCCCCAAACTCCAGTCATTCTGAGGAGCCAAGAAAACCCCAGAAATTGGGGATTATGAAGCAACAAAGGGCCAACCCCACCACTGCCAATTCAGACCTGAGCCCAGGCGCCACCCACATGAAGGACAACTTTGACATTGGGGAAGTGTGCCCCTGGGAGATCTATGACCTAGCCCCCGGGCCTGGGCCTTTGGAATCGAAAGTTCAAAAGCACGTATCGATTGCAGCTTCTGAAATGGAGAGAAACCCAACTTTTTCCTTAAAGGAGAAATCTCATCCCAAGCCTAAGGCAGCCGACCTGTGTCAGCAGTCCAATCCGAAGAGCGTAGACAAGGCCGAGGTGTGTCCCTGGGAGAGCCAAGGTCAGTCCCTCTTTGAAGAGGAGAAGTATTTGATGTCCAAGACTCAGGTTCCCCTGGGAAGAGCTCAAGGGGAGAACAGTGGCCAGCATTGTGCAACCGGTGTGTGTGCTGGGCAGTGTGAAGAACTGCCTCCCAAAGCTGTAGCATCAAAAGTGGAGAATGAAAACCTCAACCAACTAGGAGAGCAGGAGAAAAAGACATCTTCCTCTGAGCGAAACGTGCCTGACTCCCATAACTCAAGTAATAACTTTCAGCCACCTTTAATGTCACGAGCTGAGGTGTGTCCCTGGGAGTTTGAGACCCCAGATAAACCAAATGCTGAAAGAAGTGTAGCTTTCCCTGCCTCTTCTGCTTTAAGTGCAAATAAGATAGCAGGGCCTCGAAAGTAAGAGATCTGGGGTCCTTTTAAAGTGTAGCATCCCCAGAAAGAAAAGGAGAAGGAAGAAATGCTGAATTTGATATAAGATAGAAGATACAAGGATCAGAACTACCCATGGAGTATTGGTCAGTCGGGGGAAATGGGAAAGACAGGGATGGAAGAGGGTGTAGGGAGACTGGCTTCAGTGAAGAAGTTAGACTGGCCAGGAAGGTCTTTCCCCAGGGCACGCTGGGAAAATCCTTATACTTTAGCGTGTTCGGGGGAAGTAGACCTCAGTGTCTGCCCCTGATCAATACGTATCCTTGGGACTTGGAAGATCCCAAGCAAGGCAAACCAGAAGACACAGAAGAGGTACAAGATTTTCAAAGAAGAAGGTATCAATGTCTATGCCCCAAATTCTAAGTAGCTGACTAAAAAGAACTTACTTTACCTATTTAACCTTGATAGCACTGCTAACTTAATGCATCCAAAAATCCCTTTTATATTAATGATGGCTCTCATTTTCTTATCAATGTCTGTTTCAGTACCTTGTTGTGTCTCATATTCAAGCATTCCAGATTGTATAATTTTTGCAAATAACTTTGATATTATGTGACACAACACATTTATGCAATCAGCCGCTACTCAATTGTTATTGCAACTTACAGAAATACCTGCTATCTATCAACTTTAGTTGATTCTTGAAGTACAGTAAGCTTTCTTTGGCTTGGGAAGCCATAATTGTCATGATAAAAAACCTTTTAGTTTGGGCTGTGATTTATATATTGTGAATTTGGATTTGACTCTATGATTTCACATCATGGTTTGTTATACTGTCTTAATCAGGGTCTTTTTTTAAATACAAGTTGAGTGAGTTGTTTTGCACTTTTCCTGTGAGGACGCAGAAGCTTTATTAATATTGGAGATCAAGTGGTCCTTCTTAGTCACACGTCTCAATAAGTTAAGGACAACTTATCTATTGTTTGTTCAAAGTCAGAGATAGATAATGCCTTCATTCCAATTAATTGTCCCTCTTAACAGTATTTCATACTTAGAAGCATTTCGTAAGGAAGGAAAAAGCTAAGAGTGAGAAAAATATACTGTGCATTATTATTACCAATGGAAAGGGAAGCCTCTAGGAATGACAAGAGAATTCCTGGACTGCAGAGCCAGGGAATTTGCCTTGAAAACAAAGAAAGAAAGGGAGCTCCCGTTAGCACTTTCAAGGGATTATATTTTTAAAGAGAGAAAATTATTATAGCATCAAGATCATAATATGGATATATTTTTATTATGCATACTAAATATATAATATTTTAAATTACCTTAAACTACTTATTCTCATAAAACTCTTATTCATTACTTCAGGCAGGGGTAGAACTTGCTGGCTTGAATCCCAAAGAAGTTTATAACCAGAGCTACTCAAAGCCTATGAGGCAGTGTAGGTTCTTCATTCTTCCAAGCCCTGGAAAACTTCCAAGTCCTGCAAATGGCCTAGGTGAGCTACCAGGCTCAACATTTCATATGTCAGGTTTATTTGCAAGGTGAAACAGCCCCCACCCCCTAAAGCGTACTTTATAAAATGCATTGCGTTCCACACTGATCACGTGGCATGGAAATCCGAAGCTGCTGATTTAGCCCTACTGGTGTGATCATGCAAAGAGGTTCCATCGCAAAGCTCAGTCTCATTTTCTTTTAAGATGAATCACTTGAAAATAGAACCCTGACTTCCTTTCTCTCACACTAAACACCAAAGTACCATGGCTTGTTTGGCTAGGACATTCACAGCCTAAGTAACTGTTTTTTTCATTTTTCTGAGCAGCAAGGAGAAACATGCTAGGGGGATAGAAGATGAGAAAAGGGAATCCAAAAGTGGATACAGGGCTGTTCTTAGGAGTACTACACTCAGTGGAAGAAGAAAACCAGAAATTCTTATTCACCATCAGAATTTTCTCAGTTGATTTGTCTTCAGGGTTAACAGGCATTTCCCCATTTTGCAAAGCTGTGCATAGATCTTCCTCACCCATTTGCTTGCTTCGTGCATTACTCAGGATGGTGGGGTAGGTTTGAAGAGATATAGAAATTCTATTTGTTCGTGCTTTCTTCATGCATTTCCTTCTCCCCTCCCTTTTCAATCAAAGCCTATCTACTGGGTGACCTTGGAATATGACTTCAAGGTACCAAGTTGTGAATTTGGTTCGGAGCATCCAGACCCACCTACTTTTTTCATTTATGTCCAAGATCTGTTAGCACTTTATTGACTTTTTCAGAAATAAGCAGTCAGGCATCAGTGACTTTTCATTGCACTTCAGGATGACCCTGCTAGAGATGTGGCCTAAAGAAGACTTGCCAGGTTCTACCTTAGTACAGCCCATAGATTCTCCTCCACCAGCATCAATCAACGAGAGCACCTGGGGCATTCCCCTAGCCTTTCATTGCTATCACTTATGACCAAGAGAAGCTTAAACCTGCAACCCTTAAGGTTATTTTCCCAGACTGATAACAGTAAGCAAGTGAAGAAACTCTATGAAGTTCACAAACATTTGCTAGGTTGTCCTTCTCAGTGCATGTTCAGGCTGCATCCTGTCCTTGTTTCTAAGCCAGGGTTTATAAATAAGTAGATTTATAACAATCTTAATAGAACTGTATATTTTATGCAAGAGTTAAGCGCTTTACGACTTGAATTATAACCCAGCCCATTGTAAACTTTGGTGGCCATATGGATTTGACACTTGACAGTTCTCTTGTATTTGCTTCCTAGGTTTCTGCATGCAAGTGATGACAGGTAGGACTGAAAAAACACTGCCTTTTGACTTCTAGCATTTAGCAACCCAGAGTTGTAGAGTCAATAAAACTGTCAGTCTCTTCACTTAATCTGTGGTTCTTCTGAAACTATTATCTGAAACCTGCAGCATCTCATCATAAAATATTTGGTAAATTTATGTTGTGATGTGTTACAGCATGTAAATACTTATAACTTCTC EMBV3_13132 TGTGTGGGCCTGGGTGAACCTGCTTCCTCATCTGTGAAATGGGGATTTTACTGTCTGCCT Gene BVT0102_061608 + 0 NULL GK000025.2:41190362-41207309 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147426 1 XLOC_089366 Coding TCONS_00147426 XLOC_089366 Coding Coding BRAT1 25:41206024-41216776 j TSS109999 4248 1 TCONS_00147426_3 813 0.0569679849340866 15 0.606269184261929 3.52311875208498e-05 2.36545108504542e-06 4.37878232943109e-05 0.000110376209996467 5.34009612028004e-05 2.52616314500518e-06 4.11842605205986e-06 5.24885922871963e-05 0 0 0 0 0 0 2.23535367327765e-11 5.72999961719566e-05 5.67065967474428e-19 0 1.85688021719881e-05 0.000135807989358728 0 5.86408228469387e-05 3.01122774980534e-13 7.81466719068423e-10 7.68291978556943e-05 3.31701866902467e-06 2.90314115778303e-05 0 0 1.55671074460992e-05 XM_005225156.1 BRAT1 PREDICTED: Bos taurus BRCA1-associated ATM activator 1 (BRAT1), 0.0 5928 99.88 0.775423728813559 NM_152743.3 BRAT1 Homo sapiens BRCA1-associated ATM activator 1 (BRAT1), mRNA. 0.0 2123 79.06 0.577448210922787 TCONS_00147426_3 sp|Q6PJG6|BRAT1_HUMAN BRAT1_HUMAN BRCA1-associated ATM activator 1; 0.0 1110 72.38 0.998769987699877 2 coding 0 0 0 0 -0.096092671288137 0.456958362228273 0.0384852794223547 0.459564292334166 TCGCGGTCGCTGTGGAGGGCCCGGCGGGGTCGAGGTTAGGGGCCAGGGCCTCTCGGGCCGTAGAACCGCCTGGGGCCCACGTGCGCGCCCCTGGACTGGGTCCCAGCACCACCGCAGCCGCCGGCCTGGCGTCCTCCGTGGGGTCCACGGGGATGGCGCCTTCCTCAAGAACTTAGCCTGGCCAGGGATGGACAGACGGACGTCCCAGGCTTGCTCTTGACCCCGGCAGACAGAGTCACTGGCCACGCCATCCTCCGGCGAGAACCCTCCCTAACCACAGGACCGACGGGTTCCCGGGCCCCCTCCCAGGCCAGACTCGCAGAGTCCAGAGTTGGCTGCCTTTGAGCTCCTGAGGCCGCATGGTTTACCCCAGACTCCCGTCTCCACTGCCAGACTCGAGGGCTCCAGTTTGCTCTTGACAACCTCCAATCCTACCCCAGCCGAGGCTTCACTGCAGTCCTGGCAGCTAGGAGTTTTCCTCTGAAGAGTCATCACCTGGCCTGAGGAACCCCAGCCCCATCATGGACCCAGAGTGTGCCCGGCTCCTCCCGGCTCTCTGTGATGTCCTGGCAGACCCCAGGCAGCCGGTGGCAGATGACACTTGTTTGGAGAAGCTGCTGGACTGGTTTAAAGCAGTCACTGAAGCAGGCTCCAGTCTCCTGTTACTGCAGGATCACCCCTGCCTGGTAGAGCTGCTGTTCCATGTGCTGAAACCCCAGGACCTGAGTTCCAGAATCCTGTCCTTTGCGCTTCGCCTCGCAGGGATATTTGCAGCCCAGGAGAACTGCTTCCAGTACCTCCAGCAGGGGGAGCTGCTGCCTGGGCTCTTCGGGGAGCCGGGCCCCCTCGGGGCAGCGGCCTGGGCAGCCCCCTCCGTGCGCAGCGGCTGGATCCAGGGCCTGCACTCCCTGGCGCAGCACCCCAGTGCCTTGCGCTTCCTTGCCGACTCGGGTGCTGTTGACACCATCTTCTCCCTGCAGGGAGATCCCAGCCTGTTTGTGGCCTCCGCCGCCGGGCAGCTCCTGGTGCGTGTCCTGGACTTGGCCCTGTGCGGACCCGCTGAGGGGCACATCTCCCTGCAGGCCTGGGACTGGCCGGCCTGTGCCCGGAAGATCGTGTGTCACCTCGAAGACTGCCTGCGCTCCGAGGCCACCCCGCGGGTCACGCAGGCCCTGCACGTCCTGACCACTGCGTTCGGGCACTGCCATGGCCTCTGGACGCAGGGCCTTTGGGTGCAGCTGAGCCCCCTCGTGGCCCGCCTGCTCGAGAAGGACCCCGTGCCAGCCCCACACGCGCTCGTGGATCTCCTCCTCAGCGTGGCCCGCTCTTCCATGCTGAGCTCTGACCCTGGCCTGTGGGAGACGGCAGCACAGACCCTAAGCCGCCTGAGCCCCACGCAGGCAGGGCCTCTGGCTGCGGGGATCCTGAAACTGCAGGACTGTCCCCAGGCGCTGAGGATCCAGGCCTTCGGCGTCCTCCTCCAGCCCCTGGCCTTTGTCCTGGAAGCCACTGCTCAGGCCCCCGGAATGCCAGGCTTGCTGGAGGGGGCCGCAGGCGACCTGATGGCCGTGGACACGCTCCCGCCCTCCAAGTCGGCGTGCGTGGGTCTCCTGTGCAGCGCCCTGGCCCACCTGGAGCTGCTGCAGCCCCTGCCCCAGCGCCCCTCGCCCTGGCCCCAGGCGCCCCTGCTTGCAGCTGTGGTGGCGATACTCCGACTCTGCAATGGCTCAGCAGCCCCTAACTCCGAGGCGGGCGGCCGCCTGTGCGCGATGCTGGGGGGCTGCGTCCGCGTCCAGCGAGCTGCCCTGGATTTCCTGGGGGTCCTGTCTCAGGGATTGGGCCCCCAGGAGTTGGTGACACAGGTGTTTGCCATCCTGCTGGAGTACCTCGTGAGCCCCGACTCCAGCCCCACGGTTCTGAAGAAGGCCTTCCAGGCCACACTCCGCTGGCTCCTGAGCTCAGCCGCACCTCCCGGCTGCTGTGACCTGGAGCCCTATGCCCAGCTGGTCCTCGGAGAGCTGCTCTCCGTGCTGCGGAAGCGCCTGTGCAGCCCCTGCTGGGAGGTGAGGGACTCGGGCCTCGAGTTCCTGACCCAGATGACCAGACACCAGGGAGGGCAGGCCGGCTTCAGACAGGCGCTGCTGGCCTCGGAGGTGCCCGAGCTCACCAGGCAGCTCCTGCAAGACCCCGAGAGCTACGTCCGTGCAAGCGCAGTGGCCGCCGTGGGGCAGCTGTCCAGCTGGGGGCTGCTCGCCGCCCCCTCCAGCCCTGAGCACGCAGCCACCCCGCAGACCCCACTCGAGGAGCTTCTGCTTGTCCTGACCACGGACTCGGAGGGGTTCCCCCGGCGGGCCGTCATGCGGGTCTTCACAGAGTGGCTGCGGGACGGCTACGCAGACGTGGCCGAGGACCCGGAGCGGTTTGTGGCCCGAGTGCTGCAGGCGGCGAGCGGGGACCTGGACTGGGAGGTGCGCGTCCAGGGCCTGGAGCTGGCACTGGCGTTCCTGGAGCAGCTGCTGGGCCCCTGCGGCCCCTCCGCGGCGGCCCCGCCCGGCGCACTGGCCCAGGCCCTGCAGGCGCTCTGCCGGGTCCAGCTCTTCGAGTTCGCCTTCCGGTCCTTGTTTGACTGTGACCGCCCCGTGGCCCAGAAGTCCTGTGACCTCCTCCTCTTCCTGAGGGCCAAGGCCACTCCCTCCAGCAACTCGCAGGAGGCGGGGGATGGTCCCGACGTGACGTCCGTGGAGGCCGCCCTACGGAGGTGGCAGGCCGGTGAACAGGGTCAGCCCCTGGGGGAGCTGGCGCCCGAGGCCGTCCTGGCCGTGCTGAGGTCCATGGACCTGGAGGCCCTACAGGACACCCTGGCTGAGAGCAGTGACCACGTGGAGAGGAGCCCCCAGTCCCTCCTGCAGGACATGCTGGCCACTGTGGGCGTCCTGGGAGATAACGAGGCCGACTGCTACTGACCAGCCGAGCAGCGCCTCCCCAGGACCCTCCCCACGGCCCTCCCTCGGGCCCTGCCCTCCCCGGGCCCCTGCTGTGGCCCCACGGCCCTCCCTCAGGCCCTGCCTGCCCCGGGACCTTGCTGCGGCCCCACAGCCCTCCCCGGGACCCTGCTGCGGCCCCACGGCCCTCCCTTGGGCCCTGCCCGCCCCGGAACCCTGCTGCGGCCCCACGGCCCTCCCCGGGACCCTACTGCGGCCCCACGGCCCTCCCTCGGGCCCTGCCCGCCCTGGGACCTTGCTGCGGCCCCACGGCCCTCCCCAGGACCCTGCTGCGGCCCCACGGCCCTCCCTTGGGCCCTGCCCGCCCCGGAACCCTGCTGCGGCCCCACGGCCCTCCCCAGGACCCTGCTGTGGCCCCACGGCCCTCCCTCGGGCCCTGCCCACCCCAGGACCTTGCTGTGGCCCCACGGCCCTCCCCGGGACCCTACTGCGGCCCCACGGCCCTTCCTTGGGCTCTACCCTCCCAGCGGCTCTGGTCTGGATGGGTGCCCAGGGGACCCTCCAGGGGATCCAGGACCAGGCGAGCCCAGCAAGGTCAAGGAGTCCCCATTTTGATGTATTGTTGAAGAAATGGCTCATTTTCTACTCAAAATAAATGTCTTGTGACCGTGCCGGTGGGTCACACGACTCTGAGCCGGCCCAGGGGTAGTCCAGGCCCCTGGGGCTCAGAGACACAGCTGGGGAGGGCCCTCTGCACGGGGGCACGTGCTTCCTTGGCCTAGGGTGGGGGTTCCTCTGCTTAGATCCCACCATGCCCCAGGGATACCCAGGGTCAGAGAGCCAACAGCTCAGGCTGGAGAGTGTGGCCTTGGCCTCTGGGCCCTGAGGCTAAGTGACCCCAGGCCCAACCAAGCCAGATTTTCAGTCTCCAAACCCCCCAACTTTGTAGCAGTTCAGCACTCACAGGCGACGGAGTTGCTTGTGACATCAGCCGAGTCTAGCTCCAGGCTGGTCCTCGGGACTGGGCAGAAGGTACTTCAGCCCAGCTCTGCCACCTCTCGGCTGTGTGGGCCTGGGTGAACCTGCTTCCTCATCTGTGAAATGGGGATTTTACTGTCTGCCTCCTGGAGGTGAGCCTCAGTGTTCTAAAGCACACTGCACAGTCAAGAAATCTCAAGAGAAACTTAAAAATATTTTTTAACTGAATGAGAATGAAATTATAGCTTATCAAAATTTATGGACTGCAGCGAAGCAGTGCTCAGGGGGTATTTATAGCATTGAATACACATATGAGAAAAGAAGAAAG EMBV3_12980 CGTGGAAGGCAGCTGCGATCCCTCGGACCATCTCAGCCAGCTGTGTCCGGTTCTGCCACC Variant GeneID:617403|TMEM52:XM_002694183:642_cdna 189^271 3 EMBV3_09781 GeneID:617403 16 GENE TMEM52 NULL transmembrane protein 52 EMBV3_42521 TTGCATTCAGTTTTGTGGGAGAAGGGGATTGTATGTAAGGTCAGTCCGGCCTCCTCAGTC Gene GeneID:540179|GPC4:XM_002699555:43_cdna Constitutive 0 NULL GeneID:540179 X GENE GPC4 NULL glypican 4 EMBV3_17318 TTGCAAGTCAGAGCTCAGGGTCATGGTGGTCAAATTTCTCTCCATCCTCTACTGGACCCT Gene GeneID:520912|LCLAT1:XM_002691445:142_cdna Constitutive 0 NULL GeneID:520912 11 GENE LCLAT1 LYCAT MGC157105 lysocardiolipin acyltransferase 1 EMBV3_06754 CGTGTGCAAGGGCTCGGCAGTTCGCAGAGACCAGGAAGAAGAGCCATCAGTCATATAAAT Gene GeneID:767987|WFDC11:NM_001077048:1369_cdna Constitutive 0 NULL GeneID:767987 13 GENE WFDC11 MGC133650 WAP four-disulfide core domain 11 EMBV3_29659 TGGAGAAATAAGAACTCTTGGTTGGGATAAAGCTCCTTAATAAGCATTTATACTCAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01632 TCTGCTCAGACTCTTTCTTGTCCAGATTCCAAGATGGATAGCCGAGGTTCAGTGAGGCCA Gene GeneID:506687|SLC37A2:NM_001024486:5_cdna UTR3_Alt 2 NULL GeneID:506687 29 GENE SLC37A2 NULL solute carrier family 37 (glycerol-3-phosphate transporter), member 2 EMBV3_16712 CAGGGCCCAATACTGATTCGTGATTGGGGATCCCTGCATTATTATATCAAAACTTTAAAT Gene GeneID:511195|CYP39A1:NM_001098938:261_cdna Constitutive 2 NULL GeneID:511195 23 GENE CYP39A1 MGC160008 cytochrome P450, family 39, subfamily A, polypeptide 1 EMBV3_11927 GTGTAAGTTGGCTCCTTCCACTGAAGAATCCTTGATGACTGCTTACCTAGACCACCTGTC Gene BVT0101_066292 + 0 NULL GK000010.2:21821166-21832583 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34595 GTGTTGTTCCCCGGGAAAACCCTCTCCTTTGGATCAGACTCTGTTCAGGGTTTGCCCACA Gene BVT0102_333409 + 0 NULL GK000016.2:2629728-2654176 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02962 ATCGGTCACCAGTGTCCGTTCCCGCACCAGGTTTGGGATGTACATTCCGTTCCTGCAGCT Variant GeneID:514263|TMEM39B:NM_001075658:109_cdna 189^647 2 EMBV3_17122 GeneID:514263 2 GENE TMEM39B MGC139045 transmembrane protein 39B EMBV3_26423 ACCAGATGACTTGGGCAGAGGTGGAAATGAAGAAAGTACAAAGACTGGAAACGCTGGAAG Gene GeneID:281495|SOD1:NM_174615:7_cdna Constitutive 0 NULL GeneID:281495 1 GENE SOD1 SOD1L1 superoxide dismutase 1, soluble EMBV3_21133 TTGTCATGCTAACAAGGTCATGCGTCCGCAGGTTCCCTCAGTTGCTGCTTCTCAGCCGCA Gene BVT0102_156254 + 1 EMBV3_23937 GK000005.2:112711647-112802156 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201786 1 XLOC_123431 NonCoding TCONS_00201786 XLOC_123431 NonCoding NonCoding - 5:112735418-112736181 - TSS151354 763 3 TCONS_00201786_3 45 0.133682830930537 1 0 7.13274675346029e-05 0 2.42567812097949e-05 0 5.39229136814838e-07 0 0.000259866896049642 0 0.000165455012234567 4.90229125684879e-07 0 0 0 0 0 0 0 0 0.000122178373180079 0.000169653614414369 0.000721466049671564 0 0 0 0.000290578970865299 0 1.5358121149443e-05 0 6.36250372000264e-06 0 XM_005217760.1 KNTC1 PREDICTED: Bos taurus kinetochore associated 1 (KNTC1), transcript 1e-18 98.7 82.47 0.125819134993447 0 noncoding 0 0 0 0 -0.465268646027052 0.178267520959401 -0.0189113955593419 0.765489953158751 GGTTTTTTTGGTGGGGGGGGTGCTGGCGGCTGGGAGGCACATGGGATCTCATCTCCCCTACCAGGGTTCAAACCTGCACTCCCTGCATTGGAAGGCGAAGTCTCAACCACTGGACCACCAGGGAAGTCCCACAGACGTTTGTTTTTAATGGTGAGAAAACATTATTGCCAGTCCACACCCTACTCATTCCAAAGGGGTAAATCACGGCAAATTATCTGGAGCCACTGAAGGCTTTTGAGTAGAAAAGCGATTGTTTCACAACAGGCACTGTTCTATATCAGGCATGTTTTATATCTTGTAAGTTGCCTCAGTCTGACACAGTCAAAGGGCCCCTCGTCTCTGGGCCCACCCTCTGAGGCTGGCCCCACTCGCTGCCCCGGAACCCTAGCAGGTGCGGCCACTGGAGTGCTGCCTGAACTTCCTGGGCGATATGTGTGCTGGTAAGGCTGATAGCCTATCGGCGACATCTGGGTTGCTGCGACAGGGCTCTTGTCATGCTAACAAGGTCATGCGTCCGCAGGTTCCCTCAGTTGCTGCTTCTCAGCCGCACTGAGAGGGAAAGAAAGCCAGCTTATCACCAGGTAGCCCATGGCCCCTGCAAGCCAGTGAGCAGAGAAAGGCCCACCTGTTGATCCTAAATTCAAATCATCCTGGAGCGAGACAACCTACAATTAAATCCCAGTGCTGACACTCTGCGTCCTCACAAGTTACTTGGTTCATTTCCCCAACTGTACGATGGCTATGTGAGGAGTAAATGAAATAC TCONS_00193473 TCONS_00193474 TCONS_00193475 TCONS_00193476 TCONS_00193477 TCONS_00193478 TCONS_00193480 TCONS_00193481 TCONS_00193482 TCONS_00193483 . 3' 22987 TCONS_00193473 TCONS_00193474 TCONS_00193475 TCONS_00193476 TCONS_00193477 TCONS_00193478 TCONS_00193480 TCONS_00193481 TCONS_00193482 TCONS_00193483 . 3' 23749 EMBV3_28521 TGGAAGGGAAACTGCTGGCCCAAAGTCAAGCAGCAATACTAGAAGCCAGAACCTGGGGTT Gene BVV0102_358509 - 1 EMBV3_10539 GK000013.2:74480364-74484100 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33607 GTCCTATGATACTACCTTCCATGACCTGGTTGTGGAAGTAGCCTATGTTAGGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_28666 TACCTGCCTAGGAAGATTGCTCATGCTTTCTTCTGGGATTCCTTGGAGTCTTGCCCTGTG Gene BVV0102_176870 + 1 EMBV3_13120 GK000021.2:19643042-19858316 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06738 GAACTTGTGGACAGGAGATGTGGCAAAGTCCAAGGTCTACAGGAAGTTGACAGAACCCAG Gene BVV0102_017734 + 0 NULL GK000019.2:21082309-21117563 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32598 AGCGGCCCAGGAAGGAGCAGCAGCGCCGGGGAGGAAAATTCTTCCAAAGATGGTCTCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08740 GACTCCCTGGGTCCCTGCCCTCTCTTACATCCCTGAAGGATATTTTCAACAATTCTAGGA Gene GeneID:540688|PBX1:XM_002685833:60_cdna Constitutive 2 NULL GeneID:540688 3 GENE PBX1 NULL pre-B-cell leukemia homeobox 1 EMBV3_30226 CGGACACCGGCATCTCGTCCAAGGCCATGGGAATCATGAACTCCTTCATCAATGACATTT Gene GeneID:100296768|LOC100296768:XM_002692037:39_cdna Constitutive 0 NULL GeneID:100296768 13 GENE LOC100296768 NULL similar to histone cluster 1, H2bd EMBV3_15250 TCCATCATTGTCAACTGCGTGGAAGAGAAGACCAGCACCAAAAAACGAGGATGAAATGAT Variant GeneID:517417|XRN2:XM_002692141:123_cdna 162^289 1 EMBV3_04792 GeneID:517417 13 GENE XRN2 NULL 5'-3' exoribonuclease 2 EMBV3_41853 GTGGTCAGCCTGCTCTCTGTAAAGTACTGGAGCAGGTACCGGGCCACAGCCATGGCAGCC Variant GeneID:100337373|LOC100337373:XM_002695098:551_cdna 127^261 1 EMBV3_29254 GeneID:100337373 18 GENE LOC100337373 NULL hypothetical protein LOC100337373 EMBV3_14603 CTTCTATGAGCACATCGTCACCATGGGCACCGGCCAGGGCTCTCTGCTCTTCTATGACAT Gene GeneID:100336887|LOC100336887:XM_002699493:48_cdna Constitutive 0 NULL GeneID:100336887 X GENE LOC100336887 NULL DDB1 and CUL4 associated factor 12-like 2-like EMBV3_28040 AGGGGACTGCAGCCCATGACCTCCCCAGACCTGGAAGATGAGCCACGTGAGGGAAGTGTA Gene BVV0102_428789 + 1 EMBV3_41281 GK000013.2:33285265-33291603 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044979 1 XLOC_026324 NonCoding TCONS_00044979 XLOC_026324 NonCoding NonCoding LOC100847770 13:33281428-33289539 j TSS32938 1330 0.41203007518797 5 0.836621454993835 6.51049430628087e-24 0 2.08735975149363e-05 0 1.19054749070916e-23 2.86047396047437e-06 0 0.000133414736884103 1.12460047441815e-77 4.9497667298937e-05 5.16359367246549e-06 6.50346242042224e-05 0 0 0 0.000318401910946487 0.00121084272759516 3.492748947921e-05 2.75483885090511e-05 2.16283599697908e-05 2.61337828702049e-06 9.28402265285544e-39 3.43772545006839e-05 0.00013528170258152 4.6597198138893e-07 2.84375390180474e-24 1.32161277663596e-05 0.000345304006581239 0.000140418043692316 7.40238740566916e-30 XR_138835.2 LOC100847770 PREDICTED: Bos taurus uncharacterized LOC100847770 (LOC100847770), 0.0 906 100.00 0.376691729323308 XM_005252587.1 CACNB2 PREDICTED: Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant X1, mRNA. 2e-29 134 89.90 0.0736842105263158 0 noncoding 0 0 0 0 0.139421123728322 0.308931278787304 0.0210800995108927 0.692108054365932 GTTTGATCCCTGGGTTGGGAAGATCTCCTCGAGAAGAAAATCGGCAACCCACTTAAGTATTCTTGACTGGGAGATTCCATGGATAGAGGAGCCTGGAGGGCTACAGTCCATGGGGTTGCAAAAGAGCTGGACGTGACTTAGGAACTAAACAACAGCAACAAAGGGTCTACGTTAGGAATTGCTCGAAACTTCTTGTGTAGAGAAGAGTGCAAGGTCTTGGATCAGAGTGACTCTTGACCTGTTAACAAGATTGGACCAGCAGCATCATGTCATTGAGCCAAGGGCGAGGATTAAAATGAAGATCTGATGATGGATCAGTTTAAAGGGGAAAAAATAAAATTCAACATCGGAGGCAAGAATTGCTGAACATGTAAGGATGAAGGTGAGAGGAAGCTGACGTTGCTGTGCTCAGACCCCCGGAGACCTTTGACCTGCTGGAAGCTGGCACTTGGCAGTCGTCGTGGGGAGGGGACTGCAGCCCATGACCTCCCCAGACCTGGAAGATGAGCCACGTGAGGGAAGTGTAGGGGCATGACCAAGGAGCCAGCAGGTGGGAGCTCTCTGAGCGAGTCTCCTTTGGCAGCGAGCTCCCCCTACGCCCTGGCGGCTCCCGCAGCAGCATAGTGAACGGTGGAGCCAGAAGGCTGGGCTTATGACTTCAAGTGGATTATACTGAACAGAGAGACTTACTGGAGGACACTGAGCTAGCTTATCTGCCGCCACCATCTGGACATTGAGGTGCTTCGCTTGAGATTTCCCTCGAGACTTTATTAACCTCTGTAAAACCTGCAAAAGACGAGGTTTTTAAACAGGAGCGTCTGTACTCAGTACATTACTTTGAAATACGTGAAGAAAATCCAGCCTCTTCCAGATACATAATTTAGAAGAGGAGGACTATTTTAGTAACCTTTTCAGATAATTGTGGATATTTTTCTTTGATACTACAGTAAACAAGTGGTAGCTTTTTAAAGATTAGCTGCCATGGAACATCTGAAACCCTACTCTATTAAATTCCATTGATTTGTCCTGAAATTTGAATGGCATGTCATTTGTTCTTTCCAATAAAAATGGTGTTCTAAGATGACTGCAATAGTCATACCAGTAGTTGTCCTCAAGTAACTGACTTTGAGTGTGCAGATGAAGAACTTGACGTGTGCCTCCCATTTTGTTACGTAGAATATTAAAAAGGCTGGTAGCACCTTTTTGAAGAGTCAAAATTTAATAAACAATTTTGCTACTTCAAAGTACCACAAATAACACTTTATTGACTAAATATTAAAATAACAAATAGGATATTTTTGGCTTAAATAAAATACATTCTTAAAACTAA EMBV3_28074 ATCTACATCAAGCACCCACACCTCTTTAAGGCCTACCTTCTCATTGAGGAGGACATCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43641 GGCCTCAGAGCACTATGACGACGAGGAAGAGGAAGATGAAGATGACGATGAGGACAGTGA Gene GeneID:505356|C15H11ORF51:NM_001034243:137_cdna Constitutive 3 NULL GeneID:505356 15 GENE C15H11ORF51 MGC128633 protein HSPC020 homolog EMBV3_06776 AGGGGCATTTTCCGACGCTGACTGGGATAACGGCATTGATGATACTTACATTTTGGAGGC Gene GeneID:511080|CCDC111:NM_001075488:37_cdna Constitutive 0 NULL GeneID:511080 27 GENE CCDC111 MGC139819 coiled-coil domain containing 111 EMBV3_26696 GTTCACCATCCCTGTGACAGACAGAGCCAGGTGGCATCACATAGAGTCATTACTAAATGG Variant GeneID:520864|HIF1AN:NM_001083443:159_cdna 740^846 1 EMBV3_14460 GeneID:520864 26 GENE HIF1AN MGC148733 hypoxia inducible factor 1, alpha subunit inhibitor EMBV3_20438 TCTGTTGTCTTCCCAAGCACTTAGAACCCCACGCTAACCACGAGAGGAACATAAACTGAG Gene BVV0102_260900 + 0 NULL GK000008.2:85243773-85268883 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228513 TCONS_00228516 TCONS_00228518 TCONS_00228514 TCONS_00228517 TCONS_00228515 1 XLOC_138509 Coding TCONS_00228517 XLOC_138509 Coding Coding IARS 8:85266723-85350162 j TSS170344 5530 1 TCONS_00228517_4 917 0.289692585895118 26 0.934034852225605 0.000439097994368543 0.0012451530521833 0.000566932723446378 0.000395991386882026 0.00128071563629706 0.000214856494346632 0.000873863443042827 0.000602249612499126 3.21523758076993e-05 3.14541413852853e-05 8.13660886218153e-20 4.3082573060739e-05 0.000164056203290681 2.9118602848537e-15 1.78108095627916e-14 0.00389458220400011 4.34462205932957e-08 0.000207350377801844 4.5888001398415e-09 0.000712976172848306 5.05071291155742e-05 0.00320410577936014 0.000370856721365267 0.00245393996083272 0.000931406746815801 0.000978363469687161 0.000768736317097826 1.26555301187826e-06 0.00033353386875557 0.000269837919725878 XM_005210426.1 IARS PREDICTED: Bos taurus isoleucyl-tRNA synthetase (IARS), transcript 0.0 6322 100.00 0.633634719710669 NM_002161.5 IARS Homo sapiens isoleucyl-tRNA synthetase (IARS), transcript variant 0.0 2628 90.33 0.347739602169982 TCONS_00228517_4 sp|P41252|SYIC_HUMAN SYIC_HUMAN Isoleucine--tRNA ligase, cytoplasmic; 0.0 1291 91.97 0.691384950926936 2 coding 0 0 0 0 -0.120956020412375 0.583610530749626 -0.134519958079905 0.362919014530643 CAAACCAGGGCTCTTCCTCTTAGCCTCACGCTGTGTGGACATTGCATCACCCGGCCAAGACATAGACTGGTTTCTTTCAGAGCTACGCCGTCCTGCAGGCCGCTAAGTGACAAAAATGGTTCAACAAGTTCCAGAAAACATCAGTTTTCCTGCTGAAGAAGAGAAAATCTTGCAGTTTTGGTCTGACTTTAATTGTTTCCAGGAATGCTTAAAGCAATCAAAACATAGGCCAAAATTTACCTTCTATGATGGGCCTCCTTTTGCAACTGGACTGCCTCACTATGGACATATACTTGCAGGGACAATTAAAGATATAGTTACAAGATATGCTCACCAGAGTGGGTTTCACGTTGACAGAAGATTTGGCTGGGATTGTCATGGTTTACCTGTGGAATATGAAATTGATAAGACCCTGGGAATCAGAGGACCAGAGGATGTAGCCAAATTGGGGATTGCAGAGTATAACAGTCAGTGCCGAGCAATTGTGATGCGATACTCTACTGAATGGAAGTCTACTATTACCAGACTTGGCCGATGGATTGACTTTGACAATGACTACAAAACTCTGTATCCACAATTCATGGAATCTGTTTGGTGGATCTTCAAACAACTCTATGATAAAGGCCTTGTTTATAGAGGTGTGAAAGTCATGCCCTTCTCCACTGCATGCAATACTCCACTCTCCAACTTTGAATCTCACCAGAATTACAAGGATGTTCAAGATCCTTCAATATTTGTAACTTTCCCTTTGGAGGAAGATGAAAATATTTCTTTGGTTGCCTGGACAACTACTCCCTGGACTCTTCCTAGTAACCTTGCCCTGTGTGTTAATCCCGACTTGCAATATGTGAAGATTAAAGATTCTGTCAGAGGAAAATTACTCATTTTAATGGAAGCCAGATTATCAGCCCTCTATAAATCGGAGAGTGACTATGAGATCCTTGAAAGATTTCCTGGTGCCTCTCTCAGAGGCAAGAAATACCGGCCCCTGTTTGACTATTTTGTAAAGTGTAAAGAGAGTGGTGCTTTTACTGTGCTTGTGGACAACTATGTGAAAGAGGAAGAAGGCACTGGGATTGTACACCAAGCTCCTTACTTTGGTGCTGACGATTATCGGGTCTGTATGGATTTCAACATCATTCAGAAAGACTCTCTCCCTATTTGCCCTGTGGATGCCTCAGGCTGTTTTACAGCTGAAGTGACAGATTTTGCAGGACAGTATGTGAAGGATGCTGACAAAAATATCATCAAGACTCTAAAGGAACAAGGTCGACTTCTTGTTGCCAGCACCTTCACCCATAGCTACCCTTTTTGTTGGAGGTCAGACACTCCACTCATTTACAAAGCAGTGCCTAGCTGGTTCGTTAGGGTGGAGCACATGGTGGATCAGCTGCTGAGGAACAATGACCTGTGTTACTGGGTCCCAGAGTTTGTGCGAGAAAAGCGATTTGGAAATTGGCTGAAAGATGCACGTGACTGGGCAATTTCCAGAAACAGATACTGGGGCACTCCTATCCCACTGTGGGTCAGCAGTGACTTCGAGGAGGTAGTATGTATTGGGTCAATAGCAGAACTGGAAGAACTATCAGGAACAAAGATCTCAGATCTCCACAGAGAGAGCATTGACCATCTGACCATTCCTTCACGCTGTGGAAAGGGATTGTTGCATCGTGTCTCTGAAGTGTTTGACTGTTGGTTCGAGAGTGGCAGCATGCCATATGCTCAAATTCATTATCCATTTGAAAACAAGAGGGAGTTTGAGGATGCATTTCCTGCAGACTTCATTGCTGAAGGCATTGACCAAACCAGAGGATGGTTTTACACCTTGCTGGTGCTAGCCACATCTCTCTTTGGACGGCCACCATTCAAAAATGTGATTGTGAATGGACTTGTCCTGGCAAGTGATGGTCAAAAAATGAGCAAACGCAAAAAGAATTATCCAGACCCACTTTCAGTAATTGATAAATATGGTGCTGATGCCCTCAGATTATATCTGATTAACTCCCCTGTGGTGAGATCAATGGTGGATGAAGGAATGGCTCGGGAAGTCATCAATCGTATCCAGAAACTTCGCAAAAAGTGTAATCTGGTTCCAACTGATGAAATAACAGTTTATTATAAAGCAACTTCTGAGGGAAAATATCTGAATAATGTTATCGAAAGCCACACAGACTTCATATTTGCTACCATAAAGTCTCCTTTGAAACCATATCCAGTTCCTATATCGGATGAAATACTTATTCAAGAAAAAATGCAGTTAAAAGGGTCTGACCTGGAAATTACACTCACCAAAGGATCTTCCACGCATGGCCCTGCTTGTGCATATGTCAATCTTAACATTTGTACAAATGGCAGTGAGCAAGGTGGAGTATTACTTCTGGAAAATCCAAAAGGAGATAATAGGTTGGACCTTGTAAAACTGAAGAATGTTGTTACTAGCATTTTTGGTGTAAAAAATACAGAGCTGGCTGTCCTCCTTGGTGAAACAGAAATAAAAAACCAAACCAACTTACTGAATCTTAGTGGGAAAACACTGTGTGTGACTGCAGGATCAGCGCTGTCTGTGGTGGACAGTCCTAGTACTCTTCTCTGTCAGTACATCAACCTACAGCTCTTGAATGCAGATCCACAAGAGTGTTTAATGGGAACAGTAGGCACTCTTCTGCTTGAAAATCCACTTGGACAGAATGGGCTTACCCACCAAGGTCTTCTGTATGAAGCTGCCAAGATGTTTGGCCTCCGGAGCAGGAAGCTAAAGCTGTTTCTGAATGAGACTCAAACAGAAGAAATTACAGAAGAAATCCCTATGAAGACTTTGAATACGAAGACTGTGTATGTTTCTGTGTTACCAACTACAGCAGACTTCTAACATTCAGTTATCTGTGGTTCAGTCAGCGTTTCCCTGGCATATACCTGTTCTTCCCCCCTCCACTGACACAGACACATGGACACAGACGTATTGAAGATGTTTCGTTCAGATGCAGTATAATATACTGCTTTTTACCTAAAATCAAAATGGAATTGATCGGGTGACTTGAGACTTCACAGGAGTATTCACACTTAACCTTAAACACCTATGCAGTTATGTTGAGGGAAAGTTGGTGTTACCTCAGCTCTATAAAGTATGCTTCTACACTTGAAATTTTAAGTATAGAATATAGAAGTAGTTTAAATGGTATAGTGTGTGTGTCCACACACACACACACTCATATATTTATATATAGCTCTGTGGCCTTTTAAAACTGGTTTGAAATCTGTTAAAGGAATGGACAGTGTTGTATATTTTTTGCTACCTGGATTTCCCTGGGTAATTTGATGGAATATTTTAAGTTTCAGTAAATGAGAACAATAAACTTTCTCTCAGATAATACATTAGAAGTAATTCATTCTCCCATCTTTAAAGAACTCAAAACTTAATAGTCACTTCCATATTAAGACACTAGACTAAATATCTTTTTTTTCTTTTCATTGAAAGAAATTTATTTCTAAAACTCTTCAGATTACTTTTGAAACACATTTGGCACCAAGTTATTTCCAGGGCTATGACCATGTTAATGTCAGCAAACTAAAGAGGGTGATTTGAAGCAATTGTCCTAATAGTTAAATTATGGTAGTAAACTAAATATCTAATTTCACTTCTTCCCAGAAATGCTGTGTCAGAGAAGTAGATGCCAAGACAAAATTAGATGTGCAAGAACCTACTAGGGGAAGGGTATCTTTCTAATACACAAAAAATAAAGGGGAGGGTTTAAGACAAAGGTAGAGCCTTCAGAAGGAGTCCAGAGTTAGGCAGAAATGACCTGACTTTGGACCATGTCTTGCTTAGTGGCTGAAGGGGACTGTGGCCTCAGCACAGATGTATCCGTTGATCTGAAAATCCAGTAGCTAGATCAGGTATACTCCCTACATCAGATTCTCCTGAAAGGAACTCTGAATCATGTGGCTCTAGCCACTACAATAAATGCATTCAAATCCAAACCCACAAAGTTGGAGGAAACCACACAAGGTAACAAATGTTGGCAAGGATCAGAGAAACTAGAACCCTTGTGCACTGTTGGTGGGAATGTAAAATGTTGCAGTCACTATGGAAAAGAGTATAGAGGTTCCTCAAAAATTAAAAGTAGAACTAGTATGATTTCTATGATCCAGCAATCCACTTCTGGATATATATCCAAAAGAATTAAAAGCAAGGTCTTGAAGAAATATTTGCACACCCAGGTTTTGCAACATATTCACAGTAGCCAAGAGGTGGAGCAACTCAAATGTCCACTAAAGGATGAATGAAGCAAGAAAATGTAATGTATACATACAATTGAGCATTATGCAGTCTTGAAAAAGAAGGATGAACCTTGAGGACATTAAGCAAAGTGAAATAAGCCAGTCAGAAAAAGATAAATGCTGTGTGATTCCACTTGTATGAGATATCTAGAGTAGTCAAATTCATTGAAACACAACACAGTGATGGTTACCAGGTGCTACAGAGAGGGAGAAATGGGAATAGTTTTAGTTTTGCAAGTTTTGAAAAGTTCTAGAGGTCTTTTGCACAGTGTGAATATAATTAACATACTAAGCTTGATCCTTAAAAATAGCTAAGTTGTTTTTTGAATGTCAGAGGGTCAGAAGGCAACGTGAAAGAGCCTCCAATGGCCAAAGCTGGAACAGTTTGAACAAAAATGTAACTTAGTATTGAATTAAAACCCAAAGTATAAAATAAACATCAATGAGTACATGCCGATATAAATGACTGAGTAAATAGAGAGGTGAGACAGATCTTGGTAAAATTCCACACAATTTATATAGATGTTCCCTCTCAAGGTGGTATGCCTTAACTCCCCATACCCTGAGAGTGGGCTGTACTTCATGATTTACATCAAAAGAGTATAAAGTATGGAAAGGGGACAAAAAGCAACTTCGCAGTTAGAAAACTGGGACACACTGCCTCGGACAGGTCAGCATCATCAGTTATGACAGCATATACGCTTAAGAGAACTTGATGAGACTGTTACTTTACTTCTGTTGTCTTCCCAAGCACTTAGAACCCCACGCTAACCACGAGAGGAACATAAACTGAGAGAGATTCTGACAGTACTTGGCTCTTCAAAACTGTCAAGGTCATCAAAAACAAGGAGTATCTGAGATATTCACAGATCAAAGGGGACAAAGCAGACAGGCTAAATATGATGTGACATCCTGGATGTGATCCAGGAACAGAAAAAAATCTGAAGGGGAAAACTCATGAGATCCAAATAAAGTATGGAGTTTAGTTAACAGTATTGTATCATTGTTGGTTCAATAACTGTGAAAATGTACCATGATAAATGTAAGATGTAAGTTAGCAGTAAGGTAAGCTGGATGTAGAGTGTATGGAAACTCTGTTAATAAGTGGAAGAAAATTAAATTTAAAATTATTTGTAATAGCATCAAACACTGTGAAATACTTCAAGGACAAATTTGACCAAAGATGTGTAGTACCTGTATCCTGAAAATTATATTGCTTAGAGATAATAAAGCCTGTATGATTGAAAGAGAT EMBV3_10357 GCTCTTTCTGCGTTTCAACATCATTGGGAACAACTGACATTCTATAGTCAACTGCCAGGG Gene GeneID:506764|RNF34:NM_001014858:78_cdna Constitutive 1 NULL GeneID:506764 17 GENE RNF34 MGC134085 ring finger protein 34 EMBV3_38621 TGCTGGACTACGTGGAGCCTTCCCCCCAAGGGCGACGCTGGCGGACGCTGTTCAGAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08914 GCTGAAGGTGAGGCAGTGATGTCCTTCAAAGTCTGATCTGTAGGTTGGAAACGTGGTAGC Gene GeneID:281103|CTGF:NM_174030:9_cdna Constitutive 0 NULL GeneID:281103 9 GENE CTGF MGC138005 connective tissue growth factor EMBV3_37499 AGGTCTGAACATGTCGGAGTTTGTCTGTGACCCGTCAGCGAGGCCATATGTGTACGATCT Gene GeneID:508042|USP4:NM_001100319:109_cdna Constitutive 0 NULL GeneID:508042 22 GENE USP4 NULL ubiquitin specific peptidase 4 (proto-oncogene) EMBV3_09518 CCCAGCGCCAATGTGTATGACCTGGCCAAGAATTTCAACCTGGAGGTGTCCCTCTTTGAA Gene GeneID:539807|ZNFX1:XM_002692498:610_cdna UTR3_Alt 2 NULL GeneID:539807 13 GENE ZNFX1 NULL zinc finger, NFX1-type containing 1 EMBV3_34277 GTTCAACCTAAAGGGGTGAGCGGTGTGGGCGAGAAACTGAGGCAGCCTCTCATTTTTCTT Gene BVV0102_095617 + 0 NULL GK000018.2:65525751-65527233 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085045 TCONS_00085061 TCONS_00085060 TCONS_00100341 TCONS_00085058 TCONS_00085017 TCONS_00087772 TCONS_00229192 4 XLOC_051771 XLOC_060584 XLOC_052591 XLOC_138687 Coding TCONS_00087772 XLOC_052591 Coding Coding LOC100847581 18:65525927-65529878 = TSS65133 3882 1 TCONS_00087772_4 110 0.351365275631118 2 0.0177215189873418 7.30735096129476e-05 4.69077798062697e-05 0.00022451310107432 0.00026141782995478 0.000627522730022482 0.00013321887467369 0.000127958854760071 0.000176867353929354 0.000137232396296658 0.000245619360336847 2.97216015106661e-05 4.36662911951641e-05 4.8322078523646e-05 7.60338460799425e-06 0 0.00214041054366229 0.00155666909377226 0.00288705129803069 0.000279207822213204 0.000675053502836526 0.000606418481002989 0.00105226857091898 0.00142057025515838 0.00219412156520121 6.28956446201672e-05 5.71236140926268e-05 0.000161374643008379 0.000240584472623354 0.000132153523948803 0.000776976630700101 XM_003583515.2 LOC100847581 PREDICTED: Bos taurus 60S acidic ribosomal protein P1-like (LOC100847581), mRNA. 0.0 3939 100.00 0.562339000515198 NM_213725.1 RPLP1 Homo sapiens ribosomal protein, large, P1 (RPLP1), transcript 8e-117 426 82.13 0.109222050489438 TCONS_00087772_4 sp|Q56K14|RLA1_BOVIN RLA1_BOVIN 60S acidic ribosomal protein P1; 3e-13 63.2 67.54 0.781818181818182 1 coding 0 0 0 0 0.0164138513654708 0.881045122765129 0.0152818294830071 0.806467399717628 CGACTGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGACATGAGTTTGAGTGAACTCCTGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAATTCATGGAGCTGCAAAGAGTCGGACACGACTGAGTGACTGAACTGAAGTCCCCCTAAGTGGTTCCTACAGTATTGTTTACTCACAAGGAAAAGAAAATTCTGATTAACCAATGGACCACTTTCCATATATGGTGTGATGAGGCTTCCAGATGCAATTTAGACTAACAATGCCTCCTTTAAAGATGTTAGTTAAGGGTATCTCCTTAGATCCATTTGTTGCTAAAATGTCAATAACCTAAAATGGAAAATGAAATACAACAAACTAAATGTATAAAATGAATACTTGTATAATCACATAGTCAAAAACTATTTCAAATCAATTTATAACATAGAATTTTGACTACACTTACTTACACTTGTGGAAATAAAGATGGCCAACCAAATGAGAACACTCAAAGCCTATTTATTCAGAGCTACAAATCATGGCTTGAAAACGTTGAGTATCTAGATTTAAGAATTAATCAAGAAACAAGGTCAGGGAACTATATTGAATACTCTGTGTGATAAATCATAGTAGAAAAGAATATTTTTTAAAAAAGAACATATATATGCATATAACTGAGTCACCGTGCTGTACAGCATAGATTGGCACATGCTATAATAAAAAAAGTTTTAAGTGATCAAGAATATTAATGATTAAACTTTAAAAGTATATGCTGTATGTGGCTACTGCATTGTGTACAGTACACAAAGTGTTTATGAAATACTCCATTAAAAAAACAATTATTTTTATGCCAGAGAGGTCACATCACTGAAAAATAAATAAAATTCCAACATAAGTTTTTGCTGTTTCACTATCTTTTTTGTTAGGAAAAAAATAGAAACTTCAAAAAAAAAATTTTTTTAATATTTAATTTTTTTGTGGTTGCAGCTTGTAGCAGAGACTGAACCTGAGCCCTCAGCAGTGAAAGTGCCAAGCCCTAACTACTGAATTGCTAGGAAATCCCCCCAAAATTCAATAGGAATGCAGGGGTGACATTGCATTCAGTGGGGACAGCACATCCTCACTATCCTCATTTTCCTGCACAGCAACACATCTGAAGTGAAATCACATAGACACTACAAAACCACTGATGATTGTTTCATCTCACAACAGCTTCCCTATACAAGATACATAGTTCTGAATGCCATGACAATTTCTGCACTGGCTCATCCTTCACAGCTAATAGCTGGAATATTGTGGAGGCCCCTTCGATATAGACACATTTCCACAAACTTGTGGTAGCCTTTCCCCCTCCCTACAAATTCAGTGTTCCTTTAACAGATGATTCCCCCTGTCTGTACGACTGTATAATCTATGCTGCCACTATCTGGAATTCTACATATGAGGATACATGGCTCCACTGCAGGACCTAGGGAACAGACTTCTCTTACTAACTGGACGCAATCCATGATCCCTGGGAACAAGAAAATTTTCTTGACTTAGGAAGCAGCAAAGGTATCACAACTGCCCGTCTGAAGACTGACATCTGAACCAACAAAATACCAATGCATCCAGGCTACCAATAAGAACCACAAGTCCCTGCAGTCTTTTCTTGGAGGCCCTGAGCAGCAATGGCAACTAGGACAAACTAGAGAGAGGTACATTCACAGCATACTGTTCCCTCTGAGGCAGAGAGTGTGCAATTCCACAAAAAAACTTTTCAACCCTGATTGCTGCTAGAACCCAGTTGTTTTCAAGTCACCACAGTGAATAAAATCCCAAGACTGAAGGAACTTAGAGTAAGGTCTTGCTTTATCCTCCTCTGCTGCTAAGGTGCTTGGTTCTTCCGAGGAAGCTAAGGCCATTTTGGGATGAGGCCCTCACTTCATCCGGTGACTAGCACCATGCCTGGCAGCCCCCACCTAGCATTTGCCCTCACCATGGCCTCAATCTCAGAGCTCACCTGCATCTACTCTGCCCTCATTCTGCATGGCTTGTTTGCAAAGGCTTTGGCCACTGTCAACATCGGGAGCCTCATCTGCAACCTGGGGGCTGGTGGACCTGCCATGGCAGCTGGTGCTGCACCAGCAGGAGGTCTTGCCCCATCTATCACTGCTGCCCCAGCTGAGGAGAAGAAAGGAGAAACAAAGAAAGAAGAATCTGAAGAATCTGATGATGACATGGGCTTTGGTCTTTTTGACTAAACCTCTTCAGTAACATATTCAATAAAAATCTGAGCTGTTGGAAAAAAAAAAAAAAGAGTAAGGTCTTCATTTTTCACACAAACCAGTACAATGGGACGCAGACTATTCCTGGGCTTGAGGCAGGAAGAGGAGGAAAATCTCATCACAGGAGTCACAACAGACACTGAGAAAAGTAGGCTCAGTTTGCAAGTCACCAGCAGAGTAGTCTAGGACAAAAACTGGTCAACTCAGAGATGTAACCCATCAAAGGAATTAGAAAGGAATGAGTGCTCAGATTTATCACGAAGGCTCCCATAAAAGGGACAACATCAAAATGTTCTTCCTTGGACTCAGGGTGGTTCAAAAATGTACATCATGAGCACCTGCCACACAACAGTGGTGAAATGGCTTTTGCTATGGAACTGGCAATGACATAAATCTGGCAAGGGCTCTGGGCAGGTTAAGAAATGCACTGAAGCTCCCATAAACCTGGAATATTAGTGGTTTGATGTCGGGAGCCGCATTAGGCATTGCTGACGAAATGGAGGCACGGCCCTAACCCCCTCCCTTTGTTCCATAGGCACGGACCCGGAATGGAGGAGTTAGGCTTTGTGATTCTGACTTGTTTTTTCCTTCCCTAGGCTGAGTTGACTGAAGAGAATATTAAGGTGGTTATTGTTTTTGAGAGGAGCATGAGAAGGCATAAAGCCTTCTGCAGCTGTGCTCAAAGAATAATTCATAAAGTTAATCAGTGACATTTGTTCAAGGACTTTTACAAAAAAGTGTTCCAGAGTGAGCACACAGGCCACAGCTTGAAGCCATGGGAGGGATTGCTATCTGAAGCCCATTTGTGAGAAAAGTGTTTATGGCAAAGGAGTTTGCTGAATTTAGGGCTTAGGAATAATTAAAATAATTAGAAGCTAAAGATTTAAGGATTGCTGAAATGTTAGCATATTCTACTATAGCTTACAGAAATTAGGGACTTTAGAGATATTATTAGCTAGAAGCCCTTTCTAAGAAATATTTCTAAGAAATAGTGAGCTTAGGATACTAGGGGCAAACAGGACTTAGAAAGATAAGAATTAAACTGAGGAATGTGGTATGCAGCCCATACATTAGCATGAATTACAGTGTTTTCACAAGGACACATAAGAAGAAGTTGATAAGAGAATCACTGAGGAAGGAGCTCCTTTTGAGGGGCAACAATGATTTTTGGAGAAAAATAAATCTGGGTCAATGGGAACTAAAAATATCAAACCTCTGACCTAATGCTTTTGTAAAAGTATAAAAGAGAATCATAAGCTTGAAATAAACAGGAAGTCCAAGAAAAATGAGAGGCTGCCTCAGTTTCTCGCCCACACCGCTCACCCCTTTAGGTTGAATCCCTGGCTGCTGGAGATGGACTCCGGCAGTTTATTGCATGTATGAGGTCAACAGAGGCAGACAACACCCTCATAAAGGATCTCCACAGTGTTATACTGACCAATAATTCATCCCTGCACAACCCTTTTTTCTGAACTTTGTGGTATTCAATGAAATAAGACTGAAGCCTGTGAACTCTCCAGTATGTCATGAGGCTAGAGTTTTGGCTAAAAAAACAACTTCCCACATTAGTCACATCCGCAAGGCTATTATCCAGTGTGAACATTATGGTATTCTATGAGACTAGAGTT EMBV3_04330 AAGCTGTCTTCAACCACCAAGGGCGTTTGTGAACTAGAGGATTACCATCATGGGGAGGAG Gene GeneID:613767|CINP:NM_001099125:294_cdna Constitutive 0 NULL GeneID:613767 21 GENE CINP MGC166364 cyclin-dependent kinase 2 interacting protein EMBV3_20557 CCATGAGGCTGACAAGACCTACATGTTACGAGAATATACATCACGAGAGAGCAAAATTGC Gene GeneID:540486|TIPRL:NM_001079615:8_cdna Constitutive 1 NULL GeneID:540486 3 GENE TIPRL NULL TIP41, TOR signaling pathway regulator-like (S. cerevisiae) EMBV3_05699 TAAATACTCCCATCTTACCTAAGTTATAGGGTGTATGAAACAAGGGGAGAATGTGGCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25989 AAGTCTCTCAGCCGTGTCTGACTCTTTGTGACCCCACAGAATGTAGCCTGCAAGGCTCCT Gene BVT0102_364870 - 1 EMBV3_37064 GK000030.2:140284396-140370625 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24127 CAACAAGTTCCGGAGCAAGACATACTAGGCAAATTCTCCAGCAACACAGGTACATGGCCC Gene BVT0102_007210 - 1 EMBV3_16988 GK000007.2:57563237-57828306 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141681 TCONS_00213731 TCONS_00252489 TCONS_00148196 4 XLOC_086109 XLOC_130524 XLOC_155430 XLOC_090079 NonCoding TCONS_00252489 XLOC_155430 NonCoding NonCoding - X:89821747-89822938 - TSS189710 1191 1 TCONS_00252489_1 55 0.992443324937028 1 0 0 0 0 0 0 0 0 0 0 0.000556199082342439 0.000474752575823309 8.75659205462349e-05 0 0 0 0 1.54886554886193e-06 0 0 1.20762854572436e-06 0 2.07687296508648e-06 0 0 0 0 3.07469756662453e-07 0.000149199276093958 2.52716536566051e-05 5.88940917136822e-06 XM_003584621.2 LOC100849565 PREDICTED: Bos taurus butyrophilin subfamily 1 member A1-like (LOC100849565), transcript variant 1, mRNA. 1e-140 504 86.62 0.34928631402183 0 noncoding TGTTTGGAGTGGCCTTTCTGTATTCTGGCAGTTTGTGGTTCCTATTTATTGTGGAGGTTCCTCTCTGTGAGTGGGGTTGGACTGGTGGCTTGTCGAGGTTTCCTGGTTAGAGAAGCTTTTTGGTGTTCTGGTGGGTGGAACTGGATTTCTTCTCTCTGGAGTGTAATGAAATGTCCAGGAATGAGTTTTGAGATGTCAATGGGTTTGCCGTGACTTTTGGCAGTCTGTATATTGAAGCTCAGGGCTATGTTCCTGTGTTGCTGGAGAATTTGCCTGGTATGTCTTGCTATGGAACTTGTTGGCCCTTGGGTGATGCTTGGTTTCAGTGTAGGTATGGATGTTTTTGATGAGCTCCTATTGATTAGTGTTCCCCGCCCTCAGGAGTTCTCTGGTGTTCTCAGGATTTGGACTTAAGCATCCTTCCTCTGGTTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATTTGTCAGGAGCCACGTTAGGCATTACTGACAAAATGGAAGCACGGCCCCCAACCCCATCTCCTGAACCCACAGGCACAGACCCAGGATGAAGGAGTTAGCTCTTGTGATTCTTACTTATTCTTTCCTTTCTTTGGTTGAATTGGCTGGATAGAATGTTAAGGTGCTTGAGAGAACCATGAGAAAGCACAAAACCTTCTATAGTTGCACCTAGAAAAAAATCTATAAAGTAACCATTGACATTTGTTCAAGGATCTTTACAAAGAATGTCCCAGGATGAGCATGTAGACCACAGCTTGAGGCCATGGGAAGGATTGTTTTCTGAGACCTGTTTGTGAGGGAAATATTTATGGCAAAAGAAGTTTGCTGAGTTTAGGGTTTAGGAATAATTAAGAATAGCTAGAAGCCTTTTTAGGAGATAGTGATCTTAAGATGCTAGGGACAAACAGGATTTAGAAAGATAAGACATAAACTGAGGAATGCAGCATGGGTTACATTGTAATCACAAGTTAAGTGTAGGACACATAAGAGAAAGTAGATAATAGATAGTAAAGTCAATTCTGAGAGAATCGCTGAAGCAGGAACTCTGTTTGTAGGACAACAGTGATTTCTGGAGACAATAAATCTGGGTGGGGAAAACTGAAAATGTCAAACCTGTGACCTAATGCTTTTGTCCAGGTATAAAAGAGAACCTGAAGCTTGAAATAAACATGTAATTCCCCA TCONS_00247530 . 5' 9289 TCONS_00247530 . 5' 9289 EMBV3_21285 TGGAGCCAGAAGCTGGAGTCCTTCCTGCCCAGCTTGGTGCTGCACACGATCCTGAAAAGA Gene GeneID:617008|LOC617008:XM_002691673:441_cdna Constitutive 0 NULL GeneID:617008 11 GENE LOC617008 NULL hypothetical LOC617008 EMBV3_26861 ACGCTCTGCCCCTTTGGAGCCCGTTGGCCCCGTATGTAGTGCTGAAGGCACTTGAAGAGT Gene GeneID:509113|LOC509113:XM_002692546:169_cdna Constitutive 0 NULL GeneID:509113 14 GENE LOC509113 NULL similar to brain protein 16 EMBV3_38415 CTCTTGTCTCAGTAGTGGTAGGGAAGACCCAGCAGTTTTCAATCTTGTCTGCATAGCTAC Gene GeneID:515944|MFSD8:XM_002694355:116_cdna UTR3_Alt 2 NULL GeneID:515944 17 GENE MFSD8 NULL major facilitator superfamily domain containing 8 EMBV3_24161 TAAGACTCTGTGCTCTCAATGCAGAGGGCCTGGGTTTGATCCCTTGTCAGGGAACTAGAC Gene BVV0102_334929 - 1 EMBV3_19784 GK000017.2:55393260-55400570 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092318 TCONS_00092319 1 XLOC_056859 Coding TCONS_00092318 XLOC_056859 Coding Coding MRM1 19:13248521-13260040 = TSS69502 3909 1 TCONS_00092318_3 360 0.25863392171911 5 0.661052266018406 0.00048925926376357 5.95867412542041e-07 0.00133952398265067 0.000459364059419808 1.25791013669241e-09 4.47290029091346e-05 2.3306771172897e-08 3.13125423031044e-08 0.000540229695810715 2.66330683690011e-12 8.22050952965702e-09 1.27417170166788e-12 2.53499255124626e-09 1.89648420728264e-08 8.82147213639321e-10 0.000245607623769463 0.000810523384892166 1.83129055372628e-05 0.000673729417646341 0.000253801361541205 8.87349991822687e-08 6.30978036728405e-05 3.54213226059808e-12 1.38971014954249e-11 0.000997113974039105 0.000138091884048993 0.000229049212128918 0.000341619145976715 4.75906600348566e-12 2.55608132966635e-12 NM_001101126.2 MRM1 Bos taurus mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) (MRM1), mRNA. 0.0 2284 99.92 0.324379636735738 NM_024864.3 MRM1 Homo sapiens mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) (MRM1), mRNA. 0.0 1108 77.57 0.360194423126119 TCONS_00092318_3 sp|Q6IN84|MRM1_HUMAN MRM1_HUMAN rRNA methyltransferase 1, mitochondrial; 0.0 524 76.11 0.997222222222222 2 coding 0 0 0 0 -0.0664271658468845 0.55076926843039 0.0251572791740806 0.594435829329366 TTTGCGGACGCAGCCGGGTTATCGACCATGGCGCTGCCCCCGGCCGTCGGGACCGCGACCTGGCCCTGCTGCAGCCTCCCCCTCACGCGTCCTTTCTCCCAAGCGACGCGGCGCTGGGGGCGGCCCGGCGGGGAGGAGCTCGGCCGCCTGCCCCTGGATGACCTGGCGTCGATGCCGCGGTCGGCCGGGGGCCCGGAGCTCCTGTTTGGCCTGTCCCCGTGCCTCCTGGCGCTGCGGGCCGCCCGCCGCCGCGTCGCCCGGCTCCTGCTCCAGGCCTGCAGGTCTGGGCTGCAGGGGCAGCGGGCCGAGCTGCTGCGCGCGGCCGAGGAGCGGGCCATCCCAGTGCTGCGGCCCCGGCGGCGGGAGCTGGATGTCCTGTGCCGTCACCAGGTTCACCAGGGCGTCTGCATGGAAGTGAGCCCCCTGCGGCCCCGGCCCTGGGCCGAGGCCGAGGTGGCCCGGCCAGGAGACGACCCCCAGCAGCTGTGGCTCGTCCTCGAGGGGCTACAGGATCCCCGGAATCTTGGGGCTGTGCTGCGCTCCGCTCACTTCCTCGGAGTGGATAAGGTCATCACCAGCCGGAGAAACAGCTGCCCGCTCACTCCAGTAGTCAGCAAGGCCAGCGCCGGGGCTATGGAGGTGATGGACGTGTTCTCCACTGATGACCTGGCCGGTTTTTTACAGGCCAGAGCCCGGCAGGGCTGGCTCGTGGCTGGCACAGTGGGCTGCCCGGGGCCTGAGATCGCCCTGTCCTCCAAGATCCCCGTCACTCGCTGCTTGGATTTCCTCTGGGACCGGCCTACCCTCCTCGTGCTAGGGAACGAGGGCTCTGGTCTGTCTCGGGCAGTGCAGGCCTCCTGCCAGCTTCTCCTCACCATCCTGCCCGGCCGGCAGCTGCCTCCTGGACTCGAGTCCTTAAACGTCTCCGTGGCCGCAGGAATCCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGGTTCCCAGTGGAACGGAGGAGAGAGCAACTTCTCCATGACCCCCAGGATCCCTCGGCCTCATCTGAAGCAGCCAGAGTGGCTCAGCACCCAGGACTGTCCTCAGGATCAGAAAAGAAGAGACAAGACGGGGGCTAACCGGGACTGTCCATGGTGTCTGTGTGCTGGGGAGCGCACGCACCCACACCCTCGAATGTGCTGGAGTCTCTTTGTCTTATGAGTGGGCATCAGGCCTCTGTTTATAAACCGCTATCCTGGGGAGCCATGAGCTTTGCAGTAGAGACCACAGGAAGTTCAGTTTCCCGTTTTTTTGGACTTTCGGTTGGAGATGGCAGCCTATTGATTTCTACGCTGTGCTGGGACAGAGGGTCTCTTTCTTCCCAGGTCCCGCCTGGAAGCAAGGGGGAGTTTTGGACATCAGAAGGGGATCGGGCAGCCCCATCCAGGGTCCTCTTCCTCTTGGATGGGTGTGAGAAGGCAGAGGAAAGCCCGGGGCACTCCTGTGGGCCAGACAGGTGCAAATCCAGGCTCAAACCCTCTGAACACACGACTTCATCTTTCTAACCCCCAGGGCTGTTGTCAGGATCCAGTGAAACATCACTTGATATCCAGCAGGCACCCCTTCTCTCTGGTTCGTCCACTAGGTGGCAGCCTTGTTCTTTGGTCCACGGTCCCTTTGGCAAGCTTTCGCAGCCACCTGGGGAGATTCCTGGCTGTGGCCCACCCCAGAGACACAGGGGAAAGATTAGCAAATACCTATCAACTCACTGGCCCTCCAGTACCCACCATGGGTGAGTTAGTCGGCCTCCATGGAAAGACCTGCCGAACCAGAGTTCTGGCCTTTGATTCTGGGAGGTGGTGAGGACCTTGCAGATTTGCCATTTGTTGTACAACCCAGACAGATTCGGTACTACTCTCCCAGGCTCCCGTGAGCAGAGCAGAAGCCACTAGGATAAGTAGCTTAGGGCAGTCTTGGCTGCTGACTGGAACCACCTGGCAAGCTTTGAAAAGAAGCTGACACCCCCTCAGCCTGATGTAATTGGTCAGTGTGCAACGTGAACATCCGACTTTTTTTTTTTTTTTTTAAGGATTTTATTTGTTTTCTTTTTTGGCCGTGCTGGGTCTTCATTGCTGCTCAGGCTCTTCTCTAGTTGCGGAGAGCAGGGGCTACTCTAGCTGCAGTGCACGGGCTTCAGTAGTTGTGGCAAAGGGCTCAGTGGTTGCAGCTCCCCGGCTCTAGAGCACAGGCTCAGTAGTTGCGGTGAATGGGCTTAGTTGCCCCGCGGCATGTGGGATCTTCCCGGATCAGGGATCCAACCCTTGTCCCCTGCATTGGCAGGCGGATTCTTTACCGCTGAGCCACCAGGGATTTCCGAACATCCGAATTTTTAAAGCTCCCCCAGTTGGGTCTCAGTTGCAGCCCAGGTCGGGACCCATTAGGTTTCTACTGATGTTCTGGGCTGGGTAACTCAGGGCATTTAGCAGCGTCTCTGGCCTCTGTCTACAAGATGACAATAAGCACCCTCTCCCCCGAGTTGTGACAACCGAAAACGTCTCCAGACGCCGCCTCCAGACGCCGCCGTGTGTCCCTAGGGGGATGGAACGAGCCCTTGAGCAGCACTGCTTAGGAGCGTGGGTCTGGGGGATGGCCGCCGAGGCACAGGTCCTGATGCTCTGACTGGCCAGTTCCTCCCCCTCCTGCTCCTCAGTGGGCGGGGATAATCCTGCCTCCCTGGGTGGCGGGGAGGAGAGAGGCCAGAGAACTCAGGGCCATACACACTGCAGGCGCTTGGTAAGTAGTACTGCCCTATTCTCTGTGGGGTGGAGTCAGCTCGAATTCTAATGGTGATGCCAGTTAGAAAGACACTGAACTTCAATTTTTAAAAGGCCAAAGATGGGACTTCCCTGGCGGTCCAGTACTTAAGACTCTGTGCTCCCAAGGCAGGGGGCCTGGGTTTGATCCCTAGTCAGGGAACTAGATCCCACGTGCTGAAGCTAAATCTGGTGCAGCCAAATAAATATTTTTTTTAAAAAATAGTATAATTCCAGCTGATTTGGATAGTTGCACAGCAGAAAACAACGCAACGTTGTGAAGCAGTTTTCCTCCAATTAAGTGAAAGTGAAGTCGCTCAGTCATGTCCGACTCTTTGTGACCCCAGGAACTGCAGCCCGCCAGGCTCCTCCATTCCTGGGGTTTTCCAGGCAAGGATACTGAAGTGGGTTGCCATTTCCTGCTCCAGGGGATCTTCCTGACCCAGGGATTGAACCCCGGGTCTCTCTGCATTGCAGGCAGACTCTACCATCTGAGCCACCAGGGAGTCCCTCCAATTAAAAAGTAAATTATAAATGAATGAAAGGGACAAAGATGGCTTTAAAGTCAGAGCTTTTCCTCTCAAAAAGGAGGAAGAACCCCTCCTTCATACACTCCATAGATCTCCATCACACAGGTTTCTCCCTGAGCTCTGTCCCTGACTGCCACACAGATGTGACCTCCATCCAGCTCAGGTGTACGACCCCACCTCCCGCATCACCTCTGCTCTCTCCACAAAGAGGCTAGTGTGTTTTTGTTTTTCTTCTGTTTTCTGGCTGCACCACATGGTAAGTGAGATCTTAGTTCCCCGCCCAGGGATCAAGCCCATGCCCACTGTAGTGGAAGCGCTGAGTCTTAACCTCTGACCACCAGGGCGGTCCCCCTTGTGTGGTTTCTGGCTGTGGCCATCCTTAGCCTCGTGGGGTCAGGGAACGGGAGGGTCACTTGAATAGTCCAGGTGTGCAGAGGTACAGGCTGACTGAATCAGCATCTCTCGGGAAGAAGCCAGGCACCAGCATTTTTTTTTTTTAGAACTATCCCGCTGATGGCCAGTATACAGCCAGTTGGAGAATCACTGGCTGTCACATTACTACATATGTCCAACTGCTTCCAAGTCGTTCACACCC EMBV3_20761 GAGTGGGAGCAAGAAATCACCTTACGTGAAGGGAAGAGTATCTCCATGACAGTGGCAGTC Gene GeneID:525988|GPX5:NM_001025335:25_cdna UTR3_Alt 1 NULL GeneID:525988 1 GENE GPX5 NULL glutathione peroxidase 5 (epididymal androgen-related protein) EMBV3_14917 TGCTTCTGACTGGCCTGGACACTGCCTAGATTCTGTGCCTATCTGCAAACACAAGTCAGG Gene BVT0102_072380 - 1 EMBV3_14348 GK000005.2:48844490-48917721 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194918 TCONS_00191783 TCONS_00191781 TCONS_00194919 TCONS_00194920 TCONS_00191782 TCONS_00191780 2 XLOC_117879 XLOC_117019 Coding TCONS_00191780 XLOC_117019 Coding Coding WIF1 5:48913746-49009466 j TSS143658 4880 1 TCONS_00191780_14 317 0.14733606557377 10 0.949121908920904 0.00231471265473871 0.00180779545716023 0.0023242366002985 0.00120648945878759 0.0013587069631893 0.000565555603134715 0.000877298306369691 0.00120243737589292 0.0010889775419592 2.54732595603936e-11 7.788715011694e-21 1.57253889060906e-39 1.93066818136311e-16 1.08884486501277e-90 0.0006421510537062 0 0 5.68748576164313e-13 0.00160854842062815 0.00240092647417078 0.000291108318404188 3.78794166048764e-13 0 6.85983586461761e-13 0.00154238588950413 0.00160685173699581 0.00179248924820831 2.91396990270719e-13 1.16850077013528e-17 2.90969628289183e-13 XM_005206638.1 WIF1 PREDICTED: Bos taurus WNT inhibitory factor 1 (WIF1), transcript 0.0 3097 100.00 0.351639344262295 NM_007191.4 WIF1 Homo sapiens WNT inhibitory factor 1 (WIF1), mRNA. 0.0 2239 88.84 0.352459016393443 TCONS_00191780_14 sp|Q9Y5W5|WIF1_HUMAN WIF1_HUMAN Wnt inhibitory factor 1; 0.0 632 94.64 0.996845425867508 0 coding 1 0 0 0 -0.545297750238681 0.0344727077317587 0.000771751391461933 0.988258631167515 AATGCGTACACGAGTGAACACATACATGAAGCTGCCCACAAATGTAATTGACGAGAGTGAGTTACACAAGGAAAGCAAGGATAGCGGACTAGAAAATACATGGTAGAGTTTTCAAACTAAATGAAGTTGACTTGTAATACCTCCTAGCACATTACTTCCAGAATTTTATCATGTGCCAATAAATATTGTTACATTACATTTTTATTTGAGCAGAGAAATCTTAAAATATGACTTTTTTTCTGAGTGAAAAAGCCTCCGTGCTCTTTAACATCAGAAGAAAATCCAGCCTGATTCAATCTTAGATGGACCTTCTTCCCCCAAAATACACCCTCTTACTCTTGAAAAATAGCTGACTAGCGTATAACATCTGCTCCTTCCTCCCCTTCAAAAACCAAAAGAAAGCAAATCCAGTATTTTTAAATAACACTTTTCTCTACCATAAAATGTAATTTCTCCAAGTGTCCACTGCTGGGGAGAAGTAAACAGAGAAAAAAATTCCTTACAGCTGTATATATCACCAGTATCACCAGTACCAGAATCAACTGTTGCACAAGAACCTCCCTCAGAAGAAGTTGAGTTAGGAGGGAATTTAGTGCCTCTTTTTCTCTACCAAAAAGTAAATTTTTTGAAGGATATTTACCAATTACTATTTGATTAGAACAGCCTGTAGAGGGCGTCCTTACATTAAGAGCTAGAGGGGTTAGAGCACTATTGAGGGAAAAAAATACTTTCAACTAAAACTGCACCTTTCTGGAGTAAAGAAAATGTCTACTGTGTTGTGAAATTATTATCTTTGGGGAACAATCGGCATTACAATGCTAAAGTGCTTTAAGTATTGCTGAATGTATATGAATGCATTACATAAATGAATATTCACTGAAATAAAAAAACAGTGAAATCTTTGAATAGATGTGAATTTTATTGTAAAGGTAGAACAGCTGTGAAGGTTTGGTTGCAAACAGACTTAATCATGATTTACTTGTCAGTGTGAGGTATAGTGGTTAAGAGAATAGGCTTTGAAATCAGAGTGACTGGGATTTGAACCCTGACTCTACCACTGACCAGGTAAGTAACCATAGTTAGCACTGGGTAACCACAGTCAGCTAACTTACTGGACCTTTATGAGCCTGGTTTCTCCATCAGTAACGTGGGAATAATAATATCACCTACCTATTTAAAAGTGTTGTGAGAAGTAAGCTCTTAAAGTACTTTTACAATTAAGAAGTTCAAATCCATTGGAGATTTCTTGTTGTTAGGGAAATTAAAATGGAGGAAGTCTTGTTTTGGCTTCAGAAGCAGGAGAGCAGGTTCTGACCTGCTTCTGACTGGCCTGGACACTGCCTAGATTCTGTGCCTATCTGCAAACACAAGTCAGGCAGCACTGTAGATTAAAAAAAAGGAGGTGGGTCTGGAATTCTTGAGCTCCTGAGGGTCTGGCCAGCATCCCCACACCCCAACCCCAGATCTAACAAAATCCTATGACTCACAAGATAAACAGCATTGTAAAAGTTTAAAAAAGAACCAGGGCTGCACTTTTGTGTGCAAATTGATGATATGTTTGTAGCCCAGGATTGTAAGTGGGAGCCCTGGAAACTGTAATTTGAAGTCTCACCCATGGGGTGGACGCATTGCCCAGGACCTTTTCCCAAATGGGACTCCAGATTGCTATTAATGAGGGACTTCCTAGGGCTGTTCAAGCCTGGATGTTGGTTGGCGCAATTTGGTGATATATGTGCTTTTACTTTTCTTTATTCTTTTCAGTTCAGTTGCTCAGCCATATCCAAATCTTTGCTACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCCAGCACCAACTCCTAGAGCTTGCTCAAACTCATGTCCATTGAGTCAGTGATACCATCCAACCATCTTATCCTCTGTCTTCCCCTTCTCCTGCCTTCAATTTTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGTTCTTCGCATCAGGTGGCCAAAGTACTGGAGTTTCAACTTCAGCTTCAGTCCTTTCGGTGAATATTCAGGACTGATTTCCTTTAGGGTTGACTAGTTTGATCTCCTTGTGGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTTAAAAGCATCAATTCTTCTGTGCTCAGCTTTCTTTATGGTCCAACTCTCACATCCATACATGACTGCTGGAAAAACCATAGCTTTCACTAGAAGGATCTTTGTCTTTTCTTTTAATGACTGTATAATTGAAATGAAGGCAATTAATCCTCGATTAAATATTGAAATTGTTTATTGTGTGACCAGTGGTTTCTTTTGTTAACAAATCCTTCAAACCAGAGCCAAGAGGCTACACGCCCAGCCGTCTACGCGGGGAACTGCTCCGGCTGGGAGACAACTTAAGGGCGGCAGGTTGGGTAGGTGCGGGAGGAGTTTCAGCTGCGAGAACCACGATCCAGGAGGTCCGGAGTAGCATGGCCCGGAAAAGCGCCTTCCCTGCCGGCGCGCTCTGGCTCTGGAGCATCCTCCCGTGCCTGCTGGTGTTGCGAGCGGAGGTCGGGCAGCAGCCGGAGGAAAGCCTGTACCTGTGGATCGACGCTCACCAGGCGAGAGTGCTCATAGGTAAGATTTCGCGGGAGCTTCTACTTCTTCCCAAATGCCTGGGTCTTCACGCCCTGCAGCTCTTCTATTAAAGGAGAGATACATGCATTTAGAATGTTTTTTAAACTTAATTTCCAAGGAAGATTGTCCCCTTTTTAGTTAGTTGCGTGTTTGCTAAGCCCCTTCAGTCGTGTCGGACTCTTTGCGATCCTATGGACTATCGCTTTTCCATCTAAAAGCGTTTAAGCTTTTCTCTCCGTAAATCTAAGCTGTTCTAATGTTCTGATCATGCTGTTGTTGGTTTCTACAATCCAGCGTTTTTCAGTGGACCGAGCATGTGTTGGCACCAGTTTACTCCACAGTTCACTCCGTTTCACTGAAAGCATGTCTTTGCCATCATTCTTATCATCCACAGGAAGATTAATTGGTACTTGAAGGCAGGTGCTTTGTGAAAAGAAATGACCCATTACTAATTCTTCGGTGTTCTTTTGGCACGCAAGTTCTGATTTGGATTCTTCTAAGTTCAGCTAGTTTGATAGCTTTATTTCTTTGTGTGTGTTTTTTAAACCAGGACTTGAAGAAGATATCTTGATTGTTTCAGAGGGGAAAATGGCCCCCTTTACACATGATTTCAGAAGAGCACAGCAGAGAATGCCAGCTATTCCTGTCAATATCCATTCTATGAATTTCACCTGGCAAGCTGCAGGGCAGGCAGAATACTTCTATGAATTCCTGTCCTTGCGCTCCTTGGATAAAGGCATCATGGCAGACCCAACTGTCAATGTCCCTCTTCTGGGAACAGTGCCTCACAAGGCATCAGTTGTTCAGGTTGGTTTCCCATGTCTCGGCAAACAAGATGGAGTGGCAGCATTTGAAGTGAATGTGATTGTCATGAATTCTGAAGGCAATACCATCCTGCAGACACCTCAAAATGCCATCTTCTTTAAAACATGTCAACAAGCTGAGTGCCCAGGAGGATGCAGAAATGGAGGCTTTTGTAATGAAAGACGGGTCTGCGAATGTCCTGATGGATTCTACGGCCCTCACTGTGAAAAAGTCCTTTGCTCACCACGATGCATGAATGGCGGGCTATGTGTTACTCCCGGTTTCTGCATCTGTCCACCTGGATTCTATGGAGTCAATTGCGATAAAGCAAATTGCTCAGCCACCTGCTTTAACGGAGGGACCTGTTTCTACCCTGGAAAGTGTATTTGCCCTCCAGGACTAGAGGGAGAGCAGTGTGAAACAAGCAAATGCCCACAGCCCTGTCGAAATGGAGGTAAATGCATTGGTAAAAACAAATGCAAGTGCTCCAAAGGTTACCAAGGAGACCTCTGTTCAAAGCCTGTCTGCAAACCTGGCTGCGGCACACATGGAACCTGCCACGAACCCAACAAATGCCAGTGTCGGGAAGGCTGGCATGGGAGACACTGCAATAAAAGGTATGGAGCCAGCCTCCTGCATACCCTGAGGCCAGCAGGCGCCCAGCTCAGGCAGCACACGCCTTCAGTTAAAAAGGCCGAGGAGCGGCAGGACCCACCTGAATCCAATTACATCTGGTGAACTCCGACATCTGAAACATTTTAAGTTACACCAAGTTCATAGCCTTTGTTAACCTTTCATGTGTTGAATGTTCAAGTAATGTTTATTACAGTTAAGAATACTGGCCTGAATTTTATTAGCTTCATTATAAATCACTGAGCTGATATTTACTCTTCCTTTTAAGTTTTCTAAGTACAGCTGTAGCATGATGGTATAGATTTTCTTGTTTCGGTGCTTTGGGACCAACTTTATGTTATGTCAGTTGTTCAGGTTAAATTTTTGTCTTTTCAGTGTGTACTTGGCAGATAATTTCCAAAAGTACAATGCATTCACGGTATTGAGAGGCTGGGCAACATTAGAGAAGATAAATGGAATAAAAATGCATAAATCACAAGGGTTTGGATGAAGCAGTTAAAAGTGCTGAAGTCTTCGCATTTCAATTTATTTTGTCATGTATTTAGACACTTGTTACATTTTTTGAATTCCCCTTAAACTCATAATACATTTTACCTTACCATGACCTTACCATGATTCCAGAGAATTCAGTATTAAAAAAGAGCGAGAAAGAAATAACACTGTGGTAGTGACATTTAATGATATAATATATTGTAAACACAATAAAATAGGGAATATATGTATGAACTGTTGGCATTGGCTTGAAGCAATATAATATATTGTAAACAAAACACAGCTCTTACATAAACATTTTATACTGTTTGTATAAAATAAAGATGCTGCTTTAGTTTTC EMBV3_04985 TCTGTCCCTGGCTATACCTTGGAAGCTCACTGGGGATTTCTGGGGCCTCCTTGGATATTA Gene GeneID:282523|SLC25A11:NM_174671:33_cdna Constitutive 0 NULL GeneID:282523 19 GENE SLC25A11 NULL solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 EMBV3_31098 CTTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATC Gene BVT0101_082249 + 0 NULL GK000030.2:98103367-98345057 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018382 TCONS_00018603 TCONS_00091551 TCONS_00122156 TCONS_00080856 TCONS_00176155 TCONS_00118490 TCONS_00059696 TCONS_00250599 TCONS_00127445 TCONS_00071091 TCONS_00251850 TCONS_00145751 TCONS_00250203 TCONS_00133817 TCONS_00252866 TCONS_00216725 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00250681 TCONS_00173459 TCONS_00062834 TCONS_00049674 TCONS_00055707 TCONS_00082022 TCONS_00205117 TCONS_00061483 TCONS_00204211 TCONS_00018600 TCONS_00174806 TCONS_00214499 TCONS_00059695 TCONS_00038737 TCONS_00018383 TCONS_00040888 TCONS_00118487 TCONS_00232824 TCONS_00010669 TCONS_00036106 TCONS_00031759 TCONS_00070927 TCONS_00000529 TCONS_00200360 TCONS_00206299 TCONS_00091359 TCONS_00170891 TCONS_00232983 TCONS_00070907 TCONS_00159399 TCONS_00061487 TCONS_00220566 TCONS_00166748 TCONS_00232830 TCONS_00118040 TCONS_00241392 TCONS_00118441 TCONS_00055104 TCONS_00019195 TCONS_00010963 TCONS_00074644 TCONS_00252081 TCONS_00061481 TCONS_00245354 TCONS_00138892 TCONS_00061490 TCONS_00110425 TCONS_00123823 TCONS_00222997 TCONS_00174809 TCONS_00004712 TCONS_00061485 TCONS_00129574 TCONS_00162767 TCONS_00018601 TCONS_00048803 TCONS_00107436 TCONS_00206300 TCONS_00061489 TCONS_00037923 TCONS_00229354 TCONS_00125692 TCONS_00027918 TCONS_00118489 TCONS_00092545 TCONS_00173458 TCONS_00161865 TCONS_00253492 TCONS_00110426 TCONS_00006385 TCONS_00250276 TCONS_00195451 TCONS_00006741 TCONS_00091573 TCONS_00197281 TCONS_00251721 TCONS_00001865 TCONS_00091301 TCONS_00166913 TCONS_00238581 TCONS_00036105 TCONS_00216724 TCONS_00087259 TCONS_00205116 TCONS_00166911 TCONS_00061482 TCONS_00219592 TCONS_00226167 TCONS_00125637 TCONS_00242420 TCONS_00219295 TCONS_00045262 TCONS_00004714 TCONS_00011729 TCONS_00234240 TCONS_00251153 TCONS_00137167 TCONS_00079434 TCONS_00174808 TCONS_00196823 TCONS_00019326 TCONS_00223565 TCONS_00072326 TCONS_00118491 TCONS_00251851 TCONS_00018387 TCONS_00107736 TCONS_00061491 TCONS_00082029 TCONS_00145750 TCONS_00091433 TCONS_00233567 TCONS_00056184 TCONS_00174805 TCONS_00098285 TCONS_00023655 TCONS_00091548 TCONS_00175564 TCONS_00171428 TCONS_00018386 TCONS_00251677 TCONS_00188145 TCONS_00091417 TCONS_00238985 TCONS_00036107 TCONS_00160961 TCONS_00188520 TCONS_00089291 TCONS_00199364 TCONS_00216723 TCONS_00233472 TCONS_00220142 TCONS_00209974 TCONS_00103962 TCONS_00137483 TCONS_00118459 TCONS_00022430 TCONS_00061484 TCONS_00056144 TCONS_00210913 TCONS_00087260 TCONS_00009083 TCONS_00004173 TCONS_00166645 TCONS_00117949 TCONS_00195450 TCONS_00204210 TCONS_00205113 TCONS_00159398 TCONS_00167455 TCONS_00037569 TCONS_00145749 TCONS_00001867 TCONS_00160951 TCONS_00091898 TCONS_00222812 TCONS_00107804 TCONS_00167639 TCONS_00065150 TCONS_00132066 TCONS_00080713 TCONS_00201373 TCONS_00118488 TCONS_00092544 TCONS_00198905 TCONS_00243947 TCONS_00135546 TCONS_00078426 TCONS_00201129 TCONS_00004182 TCONS_00170890 TCONS_00241565 TCONS_00065586 TCONS_00018602 TCONS_00092546 TCONS_00004713 TCONS_00205125 TCONS_00004603 TCONS_00250277 TCONS_00108562 TCONS_00111100 TCONS_00228562 TCONS_00056149 TCONS_00221350 TCONS_00176866 TCONS_00061488 TCONS_00179579 TCONS_00001866 TCONS_00009619 TCONS_00196835 TCONS_00169335 TCONS_00061486 TCONS_00124525 TCONS_00206552 TCONS_00252925 166 XLOC_009242 XLOC_009288 XLOC_056325 XLOC_073711 XLOC_049738 XLOC_105934 XLOC_072644 XLOC_036486 XLOC_153542 XLOC_077655 XLOC_042864 XLOC_154791 XLOC_088920 XLOC_153146 XLOC_081223 XLOC_155807 XLOC_131313 XLOC_104695 XLOC_142312 XLOC_069472 XLOC_153624 XLOC_104361 XLOC_037561 XLOC_029805 XLOC_033515 XLOC_050894 XLOC_124587 XLOC_036985 XLOC_124371 XLOC_130702 XLOC_022558 XLOC_024702 XLOC_142307 XLOC_006220 XLOC_021081 XLOC_018004 XLOC_042704 XLOC_000141 XLOC_122012 XLOC_124877 XLOC_056134 XLOC_103679 XLOC_142465 XLOC_042684 XLOC_097411 XLOC_133883 XLOC_101584 XLOC_072206 XLOC_148056 XLOC_072607 XLOC_032913 XLOC_009875 XLOC_006514 XLOC_046398 XLOC_155022 XLOC_150703 XLOC_084763 XLOC_066329 XLOC_075375 XLOC_136303 XLOC_001092 XLOC_078287 XLOC_099648 XLOC_028934 XLOC_063346 XLOC_021752 XLOC_138849 XLOC_077234 XLOC_015372 XLOC_056919 XLOC_098750 XLOC_156432 XLOC_066330 XLOC_001948 XLOC_153219 XLOC_118048 XLOC_002303 XLOC_056347 XLOC_118943 XLOC_154662 XLOC_000454 XLOC_056076 XLOC_101749 XLOC_145248 XLOC_052423 XLOC_101747 XLOC_132911 XLOC_137940 XLOC_077179 XLOC_149084 XLOC_132614 XLOC_026393 XLOC_007280 XLOC_143719 XLOC_154096 XLOC_083377 XLOC_048319 XLOC_118488 XLOC_010006 XLOC_136865 XLOC_044095 XLOC_154792 XLOC_063646 XLOC_056208 XLOC_143049 XLOC_033987 XLOC_058531 XLOC_014322 XLOC_056322 XLOC_105345 XLOC_103815 XLOC_009243 XLOC_154618 XLOC_114188 XLOC_056192 XLOC_145651 XLOC_097854 XLOC_114563 XLOC_054076 XLOC_121017 XLOC_142954 XLOC_133459 XLOC_128485 XLOC_062257 XLOC_083693 XLOC_072622 XLOC_013100 XLOC_033947 XLOC_129423 XLOC_004639 XLOC_000983 XLOC_101481 XLOC_072115 XLOC_102291 XLOC_021418 XLOC_097844 XLOC_056668 XLOC_136119 XLOC_063714 XLOC_102475 XLOC_039872 XLOC_080699 XLOC_049597 XLOC_123019 XLOC_120558 XLOC_150314 XLOC_081769 XLOC_047314 XLOC_122777 XLOC_148229 XLOC_040305 XLOC_001070 XLOC_153220 XLOC_064467 XLOC_067000 XLOC_138526 XLOC_033952 XLOC_134666 XLOC_106640 XLOC_109351 XLOC_005172 XLOC_118500 XLOC_103335 XLOC_076071 XLOC_125074 XLOC_155866 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_00790 TTGGGACCTTTCTGACTTGCTGCTCAACATCTGGACGGCATTCGCGTTGCTTCTCAAGGA Gene BVT0102_131084 - 1 EMBV3_14335 GK000004.2:8494831-8559455 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33483 ACCAGAGTGGATTTCATATAAAGTGCGCAGTATTTAGGTCAGTTAACGTCCATACCAGGA Variant GeneID:506450|CCM2:XM_002686879:67_cdna 328^657 3 EMBV3_33676 GeneID:506450 4 GENE CCM2 NULL cerebral cavernous malformation 2 EMBV3_23057 GGCTGATGCAGTCAAGGGGGCTAGGCAGGGCATTTGTGCCAACTAAGAGAATCACCAAAT Gene GeneID:534991|STMN2:NM_001034622:40_cdna UTR3_Alt 2 NULL GeneID:534991 14 GENE STMN2 MGC128538 stathmin-like 2 EMBV3_32472 GATCAGGGAAGTCAGAGGGCTGTGTGCTTCTTCGTGTGCACTGTTGTGTGCTGTTTGAAT Gene BVT0102_329761 - 1 EMBV3_35007 GK000018.2:19124257-19157435 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33069 AATAGCTGTTCTGTGCTGTGATCAACTGTTGCTTAGGGACTATTGAGAAATGTGGGTCTG Gene GeneID:533086|HSD17B6:NM_001035395:1064_cdna Constitutive 1 NULL GeneID:533086 5 GENE HSD17B6 MGC127926 hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse) EMBV3_12489 CTGATCTACACAAAAAGACATTGGTGGTGTAGGTGGAGTTAGGGAGTGGGGGAAGAGCAC Gene GeneID:617269|ASB8:NM_001076452:93_cdna Constitutive 0 NULL GeneID:617269 5 GENE ASB8 MGC139522 ankyrin repeat and SOCS box-containing 8 EMBV3_17728 AAGCCCCCGGAGGGATGCTCCAGGGTCCCTTCTGGAAGAGAACCTCTGATGGATGTTTTA Gene BVT0102_114338 + 0 NULL GK000029.2:46934990-46969454 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164149 TCONS_00164150 TCONS_00164151 TCONS_00164152 1 XLOC_100136 Coding TCONS_00164152 XLOC_100136 Coding Coding IGHMBP2 29:46946188-46948556 j TSS122888 1586 3 TCONS_00164152_5 134 3 0.331220954795099 1.16555922650922e-09 1.87388437475833e-89 6.46226278760477e-12 0.000189834137403337 0.000130441022708041 0.000201250344403875 1.88788335741576e-94 0.000676659031237449 0.000195750979260389 9.09505148890347e-30 1.98132304184835e-05 4.56999860492018e-05 1.80911701421007e-06 0 6.83583736090418e-44 0.0033275622659927 0.000337514303859093 0.00105995418985704 8.51555189653947e-06 0.000609122820286551 0.00142576031037015 0.000571280812161704 0.000231497269404411 0.000512237119095719 3.9468456623632e-59 7.07913205342882e-37 4.619179243406e-47 5.93308304932649e-29 0.000199441847032267 0.000472299377365855 XM_003584277.2 IGHMBP2 PREDICTED: Bos taurus immunoglobulin mu binding protein 2 (IGHMBP2), transcript variant X1, mRNA. 0.0 2230 100.00 0.778688524590164 XM_005273974.1 IGHMBP2 PREDICTED: Homo sapiens immunoglobulin mu binding protein 2 (IGHMBP2), transcript variant X1, mRNA. 3e-111 407 84.66 0.229508196721311 TCONS_00164152_3 sp|P38935|SMBP2_HUMAN SMBP2_HUMAN DNA-binding protein SMUBP-2; 2e-61 205 80.33 0.923664122137405 1 coding 0 0 0 0 -0.736576842876535 0.0123933853129331 0.0180614855551348 0.725941964311642 CCCGCCCCCCACGGGAGCGGACACCCGACTCCTGCCTCCACCACGCTCAGAACACGTGACTGCACGGGCGTGGCCGCAGGATGGTCCTCCTTTGGGGGTGGGGTGTGGGTGGCGACCACGTGAGAATGGTGCCCTGCGGAGTCGTCGCCCACACCAGGGGAGCTGGAGCCGCCGGGTGCTTCTTCAAGCCGCCAGAATTAAAAACGCCGCTTAGGGATTATAGACTCCTTCCCCCTTCTGAGCGTTTCCTTACAACTTTAAAGGATTCCCACACAACTGTCTGGTTATAGGTGTTATGTTTCCTTACACTGGGCCGTGAACGAATATGCTGTGTTTCCCTGGATGGCAGGGACCCGCGGCCATAGAACTGCCCGCTGAGGAGGACTTTGATGCCCTGGTCTTGGCTGCCATCAAGGCGGACAACACCTGCGGCTTCGCCAAGTGCACGGCCAGCGTCGTGACCCTGGGCCAGCTCTGCTTGCACTGCGGCCGCCGCTACTGCCTCAGCCACCACCTGCCCGAGGTCCATGGTTGTGGGGAGAGGGCTCGCGCCCACGCTCGGCAGAGGATCAGCCGGGAAGGGGTCCTCTACCCCGGCAGTGGGACCAAGGACAGGTCCCTGGACCCCGCCAAGCGGGCCCAGCTGCAGAGGAGGCTGGACAAGAAGCTGGACGAACTGACCGGCCAGAGGCGGAGCAAGAGGAAGGAGAAGGGCAAGTGAGGCGGGCGCCCTGCCGCCCCCGTGGCCTCTGGGACCAGCGGGACCTGCAGTGCCTTTCCCTTCCTGGTGGCGGCTCTACGCGGTCGCGTGGCAGCCAGACCCACATCGGCCCCCGGCCGCGGGGTGAAGTGCCTGCCAAGGACCCAGCGATGAGCTTCTCTGATGACTCGGGACAAGGCGGAGAGGCTGGGGGATCCCAGCCCAGGCCGCTTTTCAGGGCTGCTGTTGGGGGTGGGAGCCCTCGTGCGCTCCCCACCCCCACCCCGAGGGCCTCCTGCAAGCCCGCCCTCCAGGGAGCGCTGTGGGCTGCTGCTGCCGGGTCGTGCTCTCCCCTGGACTGGGGCCTGGGCCTGCGACCCTGTGAAGGTGACAGACGGCCTCACGGCCCAGGGTGGCAGCTCCCCGCCCTTCAGGTCAGACAGGACGGAGGACGTCTCAGAGCCAGCGCTTCTCCCGGATGTCCCCACTCGCGGCTTGGCCCGCAGCTGGTCTGTGACCTCACTGGGGCCGGTTCCTGTCTCTCTTCCCTGGGGGCCGCAGTGACCCCACCCTGACCCCAACCAACGCGACTCTGGCCGTTCTGGTGCCCTGGAGGTCGGAGGTCATGTCTGGGTGTGGTTTGGGGAGGCTCCCTGCCATGCCACCCATCCGTGTCACTGTCTGCAGTGGTGGTCTCAGGGAAGAGCCCCCTAGAGCCCCGGCCTAGCCAAGCCTGCAGACCCGAAGCCCCCGGAGGGATGCTCCAGGGTCCCTTCTGGAAGAGAACCTCTGATGGATGTTTTATTTTATTCTCAGAGCTTTATTTGTTTCAAAGGAATATAAATTATTTAAACATTAAGTGAAAACATGCACACAGCCACAGTGC EMBV3_01062 GAGGAAGAAAGTCTAAATGTTTATATTCAGGGGCTAGTGTCAATCAAAGACAAACCGCAA Variant GeneID:100300568|LOC100300568:XM_002689621:30_cdna 839^904 1 EMBV3_24619 GeneID:100300568 8 GENE LOC100300568 NULL hypothetical protein LOC100300568 EMBV3_28659 GGAATGATGCCATATTTTTCTTCCTTTTATTTGCTTTAAAAAAGCAGAGGTAGATTTTTG Gene GeneID:540737|PAF:NM_001015678:115_cdna Constitutive 1 NULL GeneID:540737 10 GENE PAF KIAA0101 KIAA0101 protein EMBV3_10706 GATGGCCATGGGTGAACCAAGGTTGAACTGACGTATAGGAGAAAATTTGAATGCCTCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15709 AGCCTCTGTTCTCAGCCACCATGTAGTTGCCTTTCTCTGGAACAAGCACCGCAGCATCTT Gene BVV0102_074892 + 0 NULL GK000022.2:49784001-49857471 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127110 TCONS_00127113 TCONS_00127111 TCONS_00127112 1 XLOC_077572 Coding TCONS_00127113 XLOC_077572 Coding Coding VPRBP 22:49841392-49940777 j TSS95152 9307 1 TCONS_00127113_8 1221 0.0367465348662297 24 0.906594622876922 0.00186645026768276 0.00274724616287013 0.00185386228707573 0.00200000776641486 0.000900801690831616 0.00143165901263052 0.00119744410834251 0.0010569016680969 0.00268538504530555 0.000176504400652265 0.00018574722203329 8.68867797793624e-05 0.000320959885110157 0.00197512619061386 0.000719297523809631 1.15371604258844e-146 2.18302756318203e-08 8.40597390641872e-130 0.00153580725635157 0.00163552252321983 0.000488456186867701 2.16506053846019e-14 0.000360828115385016 9.11711172246494e-140 0.00140987871493044 0.000951444981467377 0.000687242435828361 8.76483797171165e-05 7.06153940132511e-08 0.000214267005968891 XM_005196471.1 VPRBP PREDICTED: Bos taurus Vpr (HIV-1) binding protein (VPRBP), 0.0 1.051e+04 99.17 0.631460191253895 XR_254197.1 VPRBP PREDICTED: Homo sapiens Vpr (HIV-1) binding protein (VPRBP), 0.0 7553 90.03 0.590200924035672 TCONS_00127113_8 sp|Q9Y4B6|VPRBP_HUMAN VPRBP_HUMAN Protein VPRBP; 0.0 2458 97.68 0.987714987714988 0 coding 1 1 0 0 -1.12980945360219 0.0145371531817094 -0.784375394544281 0.000367801632658418 GTCTGCTTAGCGAGGGTTGCTGTTTGTTCCCTCACCATCCTGGCAAGAGCAAGTGTCTGCTCTTTGCCCTGAGGCCCCACCCACAAAGGCAGGTAGAGCAGCCTCTGTTCTCAGCCACCATGTAGTTGCCTTTCTCTGGAACAAGCACCGCAGCATCTTTACTCCACTCTCCTGAATTTGTGGTCCTCCTGAGAGCAGCCAAGGACATGATGCTTCTCAGAGATTCTTTGGAACAAAAGCGCCTGGAATCTAGGCCTCTACTGGCCTGTGGCGTGGAGAGCCCACCTTGCCCACGTCCCCTCTGCTCTGCATTTTAGGGGAAGAGAAATGGGGAAGACAGGGTTTGTCCCCAACTCAGGCTGCCCTGGGCCTTTCCTAGCTCTCAGGTGAGACTATCAGCCCCATGAAATCGGATATATTCTGTATTTAAAAAAAAAAAAAAAGACAATTCTGGAAGCTACAAGGGTGTCGGAGAGAGTAAAGCAAAGCTTGAAGGAAGAGAGTCTCCTGTTTGCTGCCTACTGACCTCAGCTACAGAAAGGTGCCTGGTGTGTTCCTGACTTAGGACTCCTATGTGGGCTTTGTGCCACAGAGGGTTGGATGCTGACTTTAGAGCCTGCAATGGAGAAGCAAAGTTCGCAGAAGGTCAGGTCAAGCCATGACTACAGTAGCGGTCCATGTGGACTCCAAAGCTGAGCTCACTACCCTGTTGGAGCAGTGGGAAAAGGAACATGGCAGTGGGCAGGACATGGTACCCATCCTTACCAGGATGTCTGAATTGATTGAAAAAGAAACTGAAGAATATCGTAAGGGGGATCCAGACCCATTTGATGATCGGCATCCTGGTCGAGCTGATCCAGAGTGTATGCTGGGCCATTTGCTGAGAATACTCTTCAAGAATGATGATTTCATGAATGCACTGGTGAATGCATATGTGATGACAAGCCGAGAGCCCCCTTTAAACACTGCAGCTTGCAGACTCCTACTGGACATCATGCCCGGGCTGGAAACTGCTGTTGTCTTTCAAGAAAAGGAAGGAATTGTTGAGAACCTTTTCAAATGGGCCCGAGAGGCTGATCAGCCACTGAGGACATATTCTACTGGTCTGTTAGGTGGTGCTATGGAGAATCAAGACATCGCTGCTAACTACAGGGATGAGAACTCACAGCTGGTGGCAATAGTGCTTCGAAGATTGAGGGAGCTGCAGCTTCAGGAAGTAGGTTCAAGGCAAGAAAGCAAGCGTCCTAGCCCACGAAAGCTCTCCTCTGAACCCCTTTTGCCTCTGGATGAAGAAGCTGTGGATATGGACTATGGCGACATGGCTGTAGATGTAGTAGATGGCGAACAAGAGGAAGCTTCTGGAGACATGGAGATCTCCTTTCATCTTGAGTCAGGCCACAAGACCAGTAGCAGAGTGAACTCAGCAACGAAACTTGAAGAAGGGGCATTGAGGAAAAACAAGTCAACAAAACAGGCTGACAGAGAGAGCTTCAGGAAAGCCAAGCAAAAGTTGGGTTTTTCATCATCTGATCCAGACCGCATGTTTGTTGAATTGTCTAATAGCAGCTGGTCAGAAATGTCCCCCTGGGTGATTGGCACCAATTATACCCTTTATCCTATGACTCCTGCTATTGAGCAGCGACTTATTCTCCAGTATTTGACCCCTTTAGGAGAATATCAGGAGTTACTTCCCATATTCATGCAGCTTGGATCACGGGAGTTGATGATGTTCTACATTGACTTAAAACAAACTAATGATGTCCTGCTTACATTTGAGGCGCTCAAGCACCTAGCATCTCTCCTGCTCCACAATAAGTTTGCCACAGAATTTGTTGCGCACGGTGGAGTACAGAAATTACTGGAAATTCCTCGTCCTTCTATGGCTGCAACTGGTGTATCCATGTGCTTGTATTACCTGTCCTACAACCAGGATGCCATGGAAAGAGTTTGCATGCATCCCCACAATGTTCTGTCTGATGTGGTGAACTACACCCTGTGGCTAATGGAATGTTCACATGCCTCAGGATGCTGCCATGCTACCATGTTTTTCTCAATCTGCTTCTCCTTCCGGGCTGTGTTGGAACTCTTTGACCGCTACGATGGTCTTCGTCGTCTGGTGAACTTGATCAGTACTTTGGAGATTCTAAATTTGGAAGATCAGGGTGCACTTCTGAGTGATGATGAAATATTCGCTAGCCGGCAGACTGGTAAACACACCTGCATGGCCTTGCGCAAGTACTTTGAAGCTCACCTGGCCATTAAATTGGAACAAGTGAAGCAGTCTCTTCAGAGGACTGAAGGTGGCATTCTTGTTCATCCTCAACCTCCCTACAAGGCATGTTCATATACTCATGAACAGATTGTGGAAATGATGGAGTTTCTGATAGAATATGGCCCAGCGCAGCTGTATTGGGAGCCAGCTGAAGTCTTCCTCAAGCTGTCTTGTGTCCAGCTCTTATTGCAACTTATTTCTATTGCTTGCAATTGGAAGACCTATTATGCAAGGAATGACACTGTGCGCTTTGCTCTGGATGTCCTGGCTATTCTCACTGTTGTGCCAAAAATTCAGCTCCAGTTGGCAGAATCAGTGGATGTACTAGATGAGGCTGGCTCCACCGTCTCCACTGTAGGTATCAGCATTATTTTGGGAGTGGCTGAGGGTGAGTTCTTTATTCACGATGCTGAAATTCAGAAGTCAGCACTTCAGATTATCATCAATTGTGTTTGTGGCCCGGATAACAGAATTTCTAGTATTGGCAAGTTTATCTCTGGAACGCCTCGGAGGAAGCTGCCTCAGACGCCCAAAAGCAGTGAGCACACTCTGGCCAAGATGTGGAACGTGGTGCAGTCCAACAACGGCATCAAGGTGCTTCTGTCCTTACTGTCTGTCAAGATGCCCATCACAGATGCAGACCAGATCCGGGCCCTAGCCTGCAAGGCCCTGGTGGGCCTGTCTCGCAGTAGCACCGTGCGGCAGATCATCAGCAAACTGCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGATGAAAGAGCCTGTGCTTCAGGACAAGCGTAGTGACCACGTCAAGTTCTGCAAGTACGCCGCTGAGCTCATCGAACGGGTGTCGGGAAAGCCGCTTCTTATCGGCACCGATGTGTCCCTGGCACGTCTGCAGAAAGCTGACGTTGTTGCCCAGTCACGGATCTCCTTTCCTGAGAAAGAGCTGCTTCTACTGATCCGAAACCATCTCATTTCTAAAGGCCTTGGGGAGACAGCCACTGTGCTGACTAAAGAGGCCGACCTGCCCATGACTGCTGCCTCCCATTCTTCGGCCTTCACCCCGGTCACTGCTGCTGCTTCTCCTGTTTCTCTTCCCCGCACCCCTCGCATCGCCAATGGCATTGCAACTCGATTGGGTAGCCATGCTGCTGTGGGTACCTCTGCCCCTTCTGCCCCCGCTGCTCATCCTCAGCCGCGGGTGCCCCAGGGTTCACTAGCTCTGCCTGGTCCATCTCATGCAGGAAACTCCCCTGTGATTGGTAGGATCAGTTTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGAAGTCGGACCATGGCGCCTACAGCCAGAGCCCAGCCATAAAAAAGCAGCTGGACAGACACCTTCCCTCCCCGCCTACGCTGGACAGTATCATCACAGAATATCTTAGAGAGCAGCATGCTCGCTGCAAGAACCCAGTTGCCACCTGCCCACCCTTCTCTCTCTTTACTCCTCACCAGTGTCCTGAGCCAAAACAGAGGCGACAAGCGCCAATAAACTTTACCTCAAGGCTAAACCGCAGGGCATCATTTCCAAAGTATGGAGGGGTAGATGGCGGGTGCTTTGATAGGCACCTTATCTTTAGCAGGTTCCGTCCTATTTCAGTGTTCCGGGAAGCCAACGAGGATGAGAGTGGCCTCACCTGCTGTGCGTTCTCCGCACGAGAGCGCTTCCTGATGCTGGGCACCTGCACCGGGCAGTTGAAGCTCTACAACGTGTTCAGTGGACAGGAGGAGGCCAGCTACAACTGTCACAACTCAGCCATCACACACCTGGAGCCCTCCAGGGATGGATCCTTGCTGCTGACATCAGCTACCTGGAGCCAGCCTCTGTCTGCACTGTGGGGAATGAAATCAGTATTTGATATGAAGCATTCCTTTACAGAAGATCATTATGTTGAGTTCAGTAAGCATTCTCAGGACCGGGTCATAGGCACGAAGGGAGACATCGCCCATATCTTGCCAACAACTACAAGAGGAACTGCGCCACCTTTAATCCTACAGACGATCTTGTCTTAAATGATGGCGTCCTGTGGGATGTCCGCTCTGCACAGGCCATCCACAAGTTCGACAAGTTCAACATGAACATCAGTGGCGTCTTCCATCCGAACGGGCTGGAGGTCATCATTAATACTGAGATTTGGGACCTTCGAACCTTCCATCTTTTACACACAGTTCCTGCTCTCGATCAGTGTCGCGTGGTGTTCAACCACACGGGGACAGTGATGTATGGAGCTATGTTGCAGGCAGATGATGAAGATGACCTATTGGAAGAGAGGATGAAAAGCCCTTTTGGATCATCCTTCCGAACATTTAATGCGACTGACTACAAACCTATAGCAACAATTGACGTGAAAAGGAACATTTTTGACCTGTGTACAGACACCAAAGACTGCTATCTTGCTGTCATCGAGAACCAAGGCAGTATGGACGCGCTGAACATGGACACCGTGTGCAGGCTGTATGAAGTGGGCAGGCAGCGTCTGGCGGAGGACGAGGACGAGGAGGAGGACCAGGAAGAGGAAGAGCAGGAGGAAGAAGACGACGACGAAGACGACGACGACACTGATGATCTGGACGAGCTGGACACTGACCAGCTGCTGGAGGCAGAGCTCGAGGAGGACGACAACAACGAGAACGCGGGGGAGGATGGGGACAATGACTTCTCGCCCTCTGACGAGGAGCTGGCGAACCTCCTGGAGGAGGGGGAGGACGCGGAGGACGAAGACTCAGATGCAGACGAGGAAGTGGAACTGATCCTGGGGGACACCGACAGCTCTGACAACTCTGATTTGGAAGATGACATCATCTTATCTCTAAATGAGTGAGGAGTCAGCACGACGTGGAAGATTCTTGGCAGGAGAGAAACCGAGTCAGATTAATTCAGAACATCTTCCGTTCCCTTTCTCCCAGGGCTCTCTTAAGGAACTGCATGCCCTGGCCCTGCATTCAGAGAATTATGGTTTAGAGTCTCACTGGAATCTGAGAGTCCTTCTAAGAACAGTAACAACCACAAAAAGACAACAGGGGTTAGGCCCTGCTCTGCTTTCCCTTCTCCTAGGATGGACGTATCTTTCCTCAAGGGAAAAAAAAAAAACAAACATGTCTCTGGGGTTATTTCACAATATATTTTCTTTGTATAATGTTCTTTACTTAAAGAACAAGAAATAGTTTTTTATAAAACTTTAAAAAGAAAAAAAAAAAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTGTCCCTGCACTTCATTTTCTATGAAAGAAAATGATGTCTAAAGAACAATAGAGAGGCATTTTTACACACATATTTAAATGAAAAGGAAAATCGTGGTTTCTTAAATTGATAAGGATTAAGAATATTTTATTATAAATATAATATATGATTTTTTAACCTGTTTTGTTGCCTCATATGCCGCCAGGTTAATCTGTTTTCCTTCGTGCCAGAGGTGGGGAGAGGCGCTGCCTGTTCGCTGAGTAAATGCCTAGGTTCACCAGCCTTCACGGCTTGGGGGCAGCAAGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGAGCTTAGGATATAAGTTCACTCCCTCTATTTTTCTTTGTGATTCAGTTTTTCAAAAATCTTTTTTTCTTCCTTTCTCCCCAATGTGGAAATTACAAATCAAAGGCCTTTTTTCTTTAATGTAAAGTGTATTTATTTAAAAAAAAAATACAGAATAAAACTACAAGTCTGTCTTTGCTTGTTTGTGGCCTTTCCCTGTTCTCTTTTACTGAAGTGGGGTGGGGTCCCTTACCTTGCAGCTCTAGCCCAGGCAACATACAAGATGCCTCCCCGAGAGGCAGCCCAAGATGGGGTGAGCGCACGCTCTGCCCAAAGCACTCTGGGGAGAGAAGCAGCCTTGTCAGCACCAAGCCCTGGTCTGCTGGCACGGGGCAGAGGGGGTCCTCAAGGCACCACCCACCATGTGCCACCCCTCTGCCCCCGCCGTGTGTCCTGGGCTCTGAAGCAAGATCCCGATTCCGGTGTGGGGGAGCCGGAGTGTTAGGGGCCCACCTGGGATGCTGTGAGCCACGAGCTGACGGGCCTAAGGAATGGAAGCCTGGTGGCCATCACTGTTACTGTTTTCTTAAAGGAGTACCAGCAGAGACCCTGGCAGTTTGGGGGCAGCTGAGGCTGGGTTAGCAGGTATTCACTGGCTTCACAGCTGGCCTTGTGGTTAAACTGTTCCCACCAAGTAAAGCACCAAACGCTCTTAACCTGTTAACTTACCCGCCTCATCCCCTTCTTTCCCACAAGTAGGAGACCCTACTCTCTCCCCCCGAGTTTACCCAGTTTCTGTTGTAGGCATTTGTTAAGAGATTTTTCTCCGTTTGCTGAGATAAGAGGACAAATCTGTGAAGTAAACAAGACGAGACGGCTAAACCTCACTGGGGGCCGGTAAAGAAATCCCCGCTGGGCTTCGGAACACCACAGAGCGCTCACACACCGAAGCGGGCCTGTGTCGCCAGGCACCTTGTGATCCTCTGGAGGGCAGAGGGCTCGGCTCGTAAACTGCTTCATGCCTCAGCTGAAATGGATTGCTGACACCTAACCGGTAGACTGGTCTGACTGATGGTGCATTACAGGAAAAAAGGCTAAAAGTCAAGAAGCACTAGAAGCACTGTTATTCTAGTCATTAACTCAGCCGAGCCCCGGTCTCCCTGAACTCCGCCAGCAGCCCTCGGGAGCACCCACCCACAGGTCTCTTGGGTGGAGACGGGGGCCTGCAGTAAGAAAGCAGGATCCTGGTCGACCTGACAACACACCCTTAGGGAAATGCCCCGGGGAGGCAAAGAAACATCAGCCCTCCTCTTTATCTGCCAAGGCCGAAGATCTCAGTCCCTTAGGAAGAAACATGCAGAACGTACCAAACCACCAATGAGGCAAATTTCATCTCCTCTTGGTTTTTGCCTTTAAGCCACACCTCAGGTAGGAACCCCAGGTGGAGGCACTGGTTGCCTGCAGTTAAATCGTTCTCCCTGTGGGGGAAGCATCCTAAATCCGTGGGGATGGCGGAGGGAGGGGATATACACACACATACACACTTATGACTGATTCGTTCTGCTGCATGGCAGAAGCCAGCACAACACTGTAAAGCAATTATCCTCCCATTTTAAAAGACAAAAGCGGAAGGAAGGAAAGAGTTGAGAGTCTGAGGCAGAGAATAATCACAATGCAGGAAAACTCTAGTTCAGTTTGGGGCCAGAGAGCACCTATGCCTGAAAAAGGGCGAACAAGGCACGGGTTCACGTGTCCTCTCCAACCAGACTTCATAGCAGTTTTCTGTTTGGGGAAAGCCAGGTAGTGCTCTGGGTCCTGACCACCTGCTCTACGAAAGAACAGCCCAAAGACAGGGCAGCAAAGCGGCTCCGGCCTATGATCTGGGCTTTTGTCCAGACTTCACCTGCTTTAACCCTGAAGACTTGGTGGTAAAGAACGCTCCTACCAGTACAGGAGATCCCTGGGTCGGGAAGATCCCCCAGAGGATGGTATGGCTACCCATTCCAGTATTCTTGCCTGGGAAGTCCCAGGGACAGACGAGCCTGGCAGGCTACAGTCCATGGGGTTGCACAGAGTCGGACACGACTAACGCCACCGCCTGTTCTAGGCATGATGAGGCCACTCCGGCTTCCAGTGCTTCCCACTGCCTGTCTGCATCCCACACTGCTTTGCTCAGATACCTGGCAGAAGTGGCTGAAACTCAAGTATAAACACACATTCAACACTTCCTGTGTTTCAGATTATGAACGCGCTTGTTCATTAGCAACAGCTGAAGCCCAGGGAGCAGTACTTCCCCAGGCACCTTCCTTCCCGTTTAAATCTCTAAGGTCTCAAAAAGTCACCTCTTTCACTGTTCTTGTGGAGAGGCCTGTATTCTCCGTGAGGTCCGCAGTAAGCCCCAGCCTCCATCTCACAAACTTGCTCTCAAAACATCTCCGCTGTCACCTGCGCTGTCTCGCGGCAGTCAGGGTAGTGATCAAACCTAGAGGGGACAGCACGTCAACAGACCCCGCGGTTCTGGTCTCCTGGGGGCTCATTTCCCTTCCTGGAGCGCCTCTGCTCCGTCAGCCTTGACAGTGAAGCTTTCAGACCATCTAGACTGCCACAAACATTTCAACAAAGTGGGCTGTTCTATGGTGGCCACTGCTGTGTGACTGATGTCCCTCCCTGGTCCCTGACACTGCTGGCTTCATCTGCCACGCTGGCCATGCTGCCTGTAGAGACACGTGGTCAGAGAACTCAGGGCTGTCTGCAAGCCATCTTTCCCTCCCCAGCCTGCATGGCTTTTGCCCGACACCTCAGCAACTGTGACATTTCCCCAGAGAGGGACCCCATTTCCCAGTGGTCCCCACCTCAGCAGTATCAGGGCAGGAGGCCCTAGGCACCTGCGCCCACCCTGCCCCTGAGGAAGTTATGTCAGTTTACAAGAGCATCTTCCTAACCCACTGTCTTCCGTCAAAAACTCTTCAGGCCAGGGATCCCGTGTCCCTCACTCTGCTCCAGTGGCCAGACAGAGGCCCACACCAGCCCTGAACGATCATAAGAAAAGCCAGAATTCACAAGCACTGGGAAAAGTTCAAGGATTAACCAAGGAAAGTGGCCTCCCACCCTCCACTCCAACGTCTGACCACCAGTGCCCCTCGGAGTCCGAAGGAGCGCTGTCTCCACCTGGGTATCCCCGGGCTGCCGCATTAAGGGGAGAAGGGAGGCTAACAAGAGGAGGAAGCTGGGCACATCCAGGCACCAAGACCCCAATACTGCACTGCTCCTCCCATGACTACCACACCACGACTAAGGTCTACCTGCTTTCAGAAACGCCTGTCAACCAGGTGCTTTGTTCAACCCCAAAGACACGCACACTGTTCATGGCAGGAACACAAAAACTGCCACAGCGGCTAGCTAGACTTAGGCTTAACCCCTTCCTGTGCAATGGGCTCTGTGGAGGCTGGCATGGCAGGGTC EMBV3_37787 GAATGCGGAGCGTTTGACGCGTTTCCTTGGCGGTATCAGCGTACCGTTGTTTACCAAGTT Gene GeneID:100300205|LOC100300205:XM_002683934:2_cdna Constitutive 0 NULL GeneID:100300205 Un GENE LOC100300205 NULL similar to RecQ4 EMBV3_13556 CTCTTCTTGAGCTAAAAATTCAAATAGGAGAGCAAAAGAAGTATTTGCAGATACTACCTG Gene GeneID:534171|SAMSN1:NM_001035404:9_cdna Constitutive 0 NULL GeneID:534171 1 GENE SAMSN1 MGC128111 SAM domain, SH3 domain and nuclear localization signals 1 EMBV3_18093 CCTTAAAAGCAGGAACCTCTCAGCAAAAAGTGCCCTGTGTGTAGTAAAGCTGTGCGTGCC Gene BVV0102_075897 + 0 NULL GK000013.2:54942284-54963145 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043108 TCONS_00043109 1 XLOC_025852 Coding TCONS_00043108 XLOC_025852 Coding Coding DIDO1 13:54950969-54970325 j TSS31936 3417 1 TCONS_00043108_4 607 0.0567749487854843 7 0.823818134848876 0.000404159533809941 3.3183047628417e-36 4.14680458816946e-05 0 6.43742426612894e-12 8.67886170106397e-41 1.47324142922802e-05 0 2.1810765559477e-05 4.47920217441774e-06 3.82843555283054e-06 2.30375581365056e-05 5.60071084126666e-05 0.000211129411223639 4.51423140465843e-54 0.00038904348997574 0.000202932974621118 2.75907249212059e-05 3.7776970918027e-05 1.68417414116557e-57 4.67544987684723e-23 7.60696203708093e-05 0.000137639797617919 0.00085795305006881 9.37249827662712e-05 9.89291949504169e-52 0 5.06453210458889e-05 0.000244951752050597 0.000240299994262827 XM_003582946.2 DIDO1 PREDICTED: Bos taurus death inducer-obliterator 1 (DIDO1), 0.0 3550 100.00 0.575651155984782 NM_080796.3 DIDO1 Homo sapiens death inducer-obliterator 1 (DIDO1), transcript 0.0 1371 76.50 0.553116769095698 TCONS_00043108_4 sp|Q9BTC0|DIDO1_HUMAN DIDO1_HUMAN Death-inducer obliterator 1; 0.0 745 77.88 0.868204283360791 1 coding 0 0 0 0 -0.0122925844938405 0.921968579953114 0.0605268523963534 0.336800265838927 GGGCATTTTCTGAGAGCCTGGCAGGCTGTGTGGTCTTTCCAGATGTTTATTTAGAAGCACACCTGCTCCCAGGCCCCTAGTGCTCCCCTACAGAAGCACCTGGCAGCCCTCTGTAGGGTCTTGGGCACGCACAGCTTTACTACACACAGGGCACTTTTTGCTGAAAGGTTCCTGCTTTTAAGGAATGTGGAATAAGGGACCTGTAGAGGCAGTGATGGAGACAAAAGGCCTTCAGCCAAGGAGTTACTGTCCTGGGTCCAGCGTCCCAAGGTAGCAGGTGTTTCCCCTCTGAGGTCTGCTTGTTGAGTATTTGGGGAGGGGCAGGTGCGGGGGGGCTTCCTTTGTGGCTAAGACGGTAAAGAATCCGCCTGCAATGTTGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGAGCCCCTGGAGGAGAGCATGGCAACTGACTCCAGTATTCTTGACTAGAGAATCCCCATGAACAGAAGAGCCTAGCGGGCTGCAGTCCATGCGGTTGCAGAGTCCAACGCGACTAAGCACGCACAGGTACTGGGGTGTTAATTGATACTAGTCAGCACTGAGTGAAGAAAACCCAGGTGGAGGGTTATCATTTGTCAGATCCCTTTCCTTGCAGCCCCCGTAGGCAGGTGTGCCCGGTTGTGTGCGCTGAGACTGGAACTGCCCCGGCGCTGAGCTGGTTGGCTCGGTGGGGAGCGGGCTCGAGTCCAGAGAAGCTGGGAACGCAGTCCGGCGGGAAAGGAGCGCGGCGCCTTGCTTCTGCGTCCGGGTGCCTGCCTTTTCTGCCACAAACCGGGCCCAGGGTGGCCGACGGGAGCCGCGCCGCCTACACTGCCAGCCTTGGCCCTTGGACTCGGCCACTGTGCGGCGCAGGGCAGGGACTGGGCCTGGGCCGGGCTCCTCCTTCCGCCCGCCGCGCCGGGGCGCTGCTCGGGTTGCGGCCGGCCCGTCTACCCCCGGCGTCTCGGTGGCCAGCGTCTTCCCTCCACTGAGAGCGCGGGCGGCCCCTCTACCTCACGCGTCTCGGTGGCCGGCGCCAACCCCGCCCGCCCACTCTGCGGCGCTCGGAGGAAATGGCTGCGAAACCCTGGAGGCTTGCGGCCCACGGAGCTTACTCCGTGGACACAGTCTCAAGATAATTTGCCTTGTGATCTGTGAACAGTGGCTGACGACAGCAGCATTGGGGGCCTGGTGCTTTCCTTGTGCCACAAGGTTGTAACGGCCCTGTTTGTGCTGGGTTTAGGAAGTCGGGAGAAGTGCCCATGCTTCTGTGTGGGGCAGGTTTTCATTCTGTACGAGTCCTCCCCCTGGGATGGAACGTGGCATAAAATCTGAGTTGTCATTAGCATTTAAATGTAATTGAAGCCTGTACAGCTTGGGGAAAAAATTCTTAAGGTATGGATGACAAGGGTGACCCGAGTGGTGAGGAGGCGCCCAAAGCCATCAAGCCCACCAGCAAGGAGTTCCGGAAGACTTGGGGCTTCCGGAGGACCACCATTGCTAAGCGCGAGGGTGCCGGGGATGCGGAGGTGGACACCCTGGAGCCGTCGCCCCGGCAGCAGCAGAGCCCATCCCTGCGGCGCAGTGGGCGGCAGCCAAAGCGCACTGAGCGGGTGGAGGAGTTTCTGACCACTGTGCGGCGCCGTGGCCGTCGGAGTGCCCCCGTGTCCCTGGAGGACTCTGGGGAGCCAGCGTCCTGTCCAGCAACAGACGCGGAGACTGCCTCTGAGGGCAGTGTGGAGAGCGCCTCAGACGGGAAGAGTGGGCCCAGGTCCAGCTCCACGGGTGCTAAGCAGCGGCTGGCCTCCTCGGCAAAGGCCAGAGAGGGCGAGGACGAGGACGACACGTCCGACAGCGACAGCGACGGACTGACCTTGAAGGAACTCCAGAACCGCCTGCGGAAGAAGCGTGAGCAGGAGCCCGCGGACCGGCCCACGAGGGGCATCCAGAACCGCCTGCGGAGGAAGCGGCGGGAGGAGGACCCGGCTGAGACCGTGGACGTCCAGGCAGGGGATGTGATGGAGGGCTCACTGCCTGCCTCACGGGAGCCTGAGGGCGACCTGGGGGCTGCGGCCCAGGCAGTGAAAGAGGACAGAGAGGGCCGGCAGGATGGGAGAGTGGCCCCAGGAGGGAGAGCCGAGGAAGCCGCAGACTCGATCCGGCACAAGCCGGAGTGTGAGGTGTACGACCCCAGCGCCCTGTACTGCCTGTGCCGCCAGCCTCACAACAACAGGTTTATGATTTGCTGTGACCGATGTGAAGAATGGTTTCATGGTGACTGTGTGGGCATTTCTGAGGCTCGAGGGCGCCTCTTGGAGAGGAATGGGGAAGACTACATCTGCCCCAACTGCACGATCCTGCAGGTGCAGGATGAGGCCAGCTCAGAAGCCACAGACATGCAGGACACGAGGTCAGGACCCCTGGGTGCCGACAGCACGGACTTCACCAGTATAGGAACCGTGGAGCAGAAGTCAAGTGAAGACCAGGGAATTAAGGGTAGAATTGAAAAAGCTGCAAACCCAAGTGGCAAGAAGAAACTCAAGATATTCCAGCCCGTCGTGGAAGCACCTGGTGCTGCCAAGTGCATCGGCCCTGGGTGCTCAAGCGTGGCACAACCTGACTCGGTCTACTGCAGCAACGACTGCATCCTGAAGCACGCTGCGGCCACCATGCGCTTCCTGAGTGCAGGGAAGGAGCAGAAACCCAAAGCAAAAGAAAAGCTGAAGACAAAGCCAGAAAAAATCGTTCTTCAAAAATGTAGCGTTCAAGCAGGCATTAAAATCTCTTCTGTGCACAAGAGACTGGCTTCAGACAAGAAGGAAAACGCGGTGAAGAAGGCAGCAGTGGCCCCTCCCAGGAACGAGGTCCTCACTAAGGAGCCAGTCTGTGAGAGCAGCACGCCGTCCTGGGCCAGCGACCACAATTACAATGCAGTAAAGCCAGAACAGACTGCTGCCCCCTGGCCGCCACTGTTGTATAAATGTATGTATCACCCAGGGGGAGCTCTGGACCCTTCCTGGTCTTTCTGGACGGCCGTGCACTCAGGCCTGTTCAGAGCTAGGAGTTCTAGCCATTTGTGGTGCTGCACCTGCAGAGATCGGAGCCCTTGCCCGAGGCCAGGAGGCCTCCTGAGCCTGGCGCACCCTTCCTTAGTCTGTTGGGACTTCCTGTCAGTGTTTCCAAAAAGCTGTACCAGCTCATGGCTGAATGTTCACCTCTGACCATTGATGTCTTTAATCACTTTCTTTATTATTAGGCTCTGGTAAGTATGTGTAGTGTCTTCAACAGAACCTGATGGTGGGGCACTCAGCCCACCCCCAAGGTCCGCCGGAGTCTGCCACGGTGCCACCACCGCCGGGAGCTCTCCACATGGGGCTGTGCCATGCAGCCTGCTCCCTACACACGTGACC EMBV3_13667 ACAGTCAGGACAGGGGTGTCTGTGGTGAGAATGCAGAGGGTTGAAGAGGAGAAGAAAGCA Gene GeneID:444864|PEG3:NM_001002887:10_cdna Constitutive 0 NULL GeneID:444864 18 GENE PEG3 NULL paternally expressed 3 EMBV3_26712 TCTTCTCTGTCATGTTCGACCACATCCAGCGGCTGATCTCCTACACTGAGTATCTCTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20688 TCTACACCTATCTCACCCTGCTCCCTGCCACCTACAACTCCATGATCAACCCCATCATCT Gene GeneID:540687|GPR3:XM_002685690:347_cdna Constitutive 0 NULL GeneID:540687 2 GENE GPR3 NULL G protein-coupled receptor 3 EMBV3_35624 CAGGGCTGCTACTTAATCGTTCCCTTTCCTTAACCTTCTTTTCCTCTTGAGGGCAGAGTC Gene BVV0102_278245 - 1 EMBV3_00525 GK000005.2:26539250-26580497 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02628 AAGAGTAAGGCAGTGACAGCTCACACAAGGCAGGACACTCTTACCCTCCCGTTTCCCTTA Gene GeneID:508729|TMED4:XM_002686889:96_cdna Constitutive 2 NULL GeneID:508729 4 GENE TMED4 NULL transmembrane emp24 protein transport domain containing 4 EMBV3_30595 TGAGCAGCCCTCCCTCACTACCAGTCGTTCCAGCCTTAATTTGAAAGCAGATGACGGACT Gene GeneID:539739|KCND3:XM_002686140:245_cdna Constitutive 0 NULL GeneID:539739 3 GENE KCND3 NULL potassium voltage-gated channel, Shal-related subfamily, member 3 EMBV3_24131 TAGCTCTCCAATGAGACCTGTCTGTGCGAATCCGAAGGAGATGATGGACTGCTCTATCTG Gene BVV0102_095028 + 0 NULL GK000011.2:99227211-99232118 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026206 TCONS_00026210 TCONS_00026203 TCONS_00026209 TCONS_00026207 TCONS_00026213 TCONS_00026211 TCONS_00026201 TCONS_00026212 TCONS_00026208 TCONS_00026204 TCONS_00026205 1 XLOC_014940 Coding TCONS_00026201 XLOC_014940 Coding Coding SET 11:99215536-99230768 j TSS18837 5524 1 TCONS_00026201_1 292 8 0.637843871052459 4.77761613174154e-09 0.000265721385639588 0.000284332203995116 0.000879899614559889 5.43253362447092e-12 0.000362445456365272 5.46472934283965e-15 0.000352602123638044 0.00236777526632309 0.00233370609231355 0.00050220924102582 0.00139007292562582 0.000111552480000402 0.000633269720455995 0.000129983627868153 0.0150515772571606 0.00177058855559618 0.0103978843974216 6.51115634544808e-23 2.88860592571444e-14 3.48570049033692e-20 0.00420269834088722 0.00720363616331402 0.00945164545888695 0.000503318777866233 4.25494123597859e-10 7.60241063911343e-08 0.000981120549749817 9.01315117803048e-16 0.000963485754622596 XR_084108.3 LOC782688 PREDICTED: Bos taurus SET nuclear oncogene pseudogene (LOC782688), 0.0 3079 99.14 0.31643736422882 NM_001122821.1 SET Homo sapiens SET nuclear oncogene (SET), transcript variant 1, 0.0 3415 86.51 0.517740767559739 TCONS_00026201_1 sp|Q9EQU5|SET_MOUSE SET_MOUSE Protein SET; 7e-155 439 91.18 0.811643835616438 1 coding 0 0 0 0 0.0880836063826543 0.559405142364288 -0.0542129831352637 0.488397280575417 CTGCGCCCAGTTGTCTCAAGGATAACTGCTTTTGCTCTTCCTTTGTAATTTTTGACTGGATTCCTTCAACATTCATTTATTTCTCCAAGCTGAGATCTAACTACCAGGGAAGTAGTTAGCCAGACATGGGGGTGGGAGTGGAGAGACTGAAGAATGTTACAGGCTGAGGTAAGGCAAGAGCACGCTGAAATCCTCCAGAGGCCAGAGGAAAAAAAGAGGACAGGTCCAAGTTCTCATTGAGGGCAGTGCTGCCTCCAGAGAAGATCTGAGAAAGGACTGGAGGATCGGTCATTGGGGTTTCAAGTCGAGACCAAGAGGGTCCTAGAAAGAAGAGAACTGCTCCCTGCTGGAGGAAAACACCTTCCCCACCCACCCAAGGCCTAGAAAGCCCTGGGAGAGAACAGAGCAAGGAAAAGAAGTTGATTTTGATTGGAGGGTGGGTAGTAGAGGCGGGGGAGTGGGGTGTGTCCCACTGTCTTGTAAATATCCCCTCCAGGCACATTCCCAGCATATTTAAACCTCTGTCACCTGGGACAGCTTCAGTTCTCTGAGCTCGCAGTTCCTCCCTCTTCCCCTGGGAGGATTCTTGGCTTTTTTTCCCCCAGCATGGCCCCCAAACACCAGTCTTCTCTTCCACCCCAAGCGAAGAAACTGAAGAAGGCCAGGCCGACTCCTGCCTCCAGGCCAAACGAGGCATCTGCTTCTTCAAACTTGCCGAAGGAAGAAAAAGAACAGCAAGAAGCAATTGAACATATTGATGAAGTACAAAATGAAATAGACAGACTTAATGAACAAGCCAGTGAGGAGATTTTGAAAGTAGAACAGAAATATAACAAACTCCGCCAACCATTTTTTCAGAAGAGGTCAGAATTGATCGCCAAAATCCCAAATTTTTGGGTAACAACATTTGTTAACCATCCACAAGTGTCTGCACTGCTTGGGGAGGAGGATGAAGAGGCGCTGCATTATTTGACAAGAGTTGAAGTGACAGAATTTGAAGACATTAAATCAGGTTACAGAATAGATTTTTATTTTGATGAAAACCCTTACTTCGAAAATAAAATTCTCTCCAAAGAATTTCATCTGAATGAGAGTGGTGATCCATCTTCAAAGTCCACTGAAATCAAATGGAAATCTGGAAAGGATTTGACGAAACGATCAAGTCAAACACAGAATAAAGCCAGCAGGAAGAGACAGCATGAGGAACCAGAAAGCTTCTTCACCTGGTTTACTGATCATTCTGATGCAGGTGCAGATGAGTTAGGAGAGGTCATCAAAGATGATATTTGGCCAAATCCATTACAGTACTACTTGGTTCCTGACATGGATGATGAGGAAGGGGAAGGAGAAGAGGATGACGACGACGACGAAGAGGAAGAAGGATTGGAAGACATTGATGAAGAAGGGGATGAGGATGAAGGTGAAGAAGATGAAGATGATGATGAGGGGGAGGAAGGAGAGGAAGATGAAGGAGAAGATGACTAATGGAACACTGATGGATTCCAACCTTTTTTAATTTTCTCCAGTCCCTGGGAGCAAGTTGCAGTCTTTTTTTTTTTTAATTTCTCCTCCTCTTGTGCTCAGTCGCCCTGTTTTTGAGGTCTCTTTTCTCCTTTATACCATGGTTCACAACTTATTTGGGGGGGAAATACCTTGAGCAGAATTCAGTGGGACAAGAATCTCTACCCCTTTCTGTTCCAAATTCATTTTTATCCCTTCCTGTCTCAACAAAAACTATGGAATCAACACCACCATGCTCTGTGGGAAAAAAAGAAAAACCTTCTGCTCCCTTAGCTCTGCTGGAAGCTGGAGGGTGCTAGGCCCCTGTGTAGTAGTGCATAGAATTCTAGCTTTTTTCCTCCTTTCTCTGTATATTGGGCTCAGAGATTACACTGTGTCTCTATGTGAATATGGACAGTTAGCATTTACCAACATGTACCTGTCTACTTTCTCTTGTTTAAAAAAAGAAAAAAAAAAAACTTAAAAAAATGGGGTTATAGAAGGTCAGCAAAGGGTGGGTTTGAGATGTTTGGGTGGGTTAAGTGGGCATTTTGACAACATGGCTTCTTCTTTGGCATGTTTAATTGTGATGTTTAACGGACATCCTTGCAGTTTAAGATGACACTTTTAAAATAAAATTCTCTCCTAATGATGACTTGAGCCCTGCCACTCGATGGGAGAATCAGCAGAACCTGTAGGATCTTATTTGCAATTGACATTCTCTATTGTAATTTTGTTCCTGTTTATTTTTAAATTTTTCTTTTTGTTTCACTGGAAAGGAAAGATGATGCTCAGTTTTAAACGTTAAAAGTGTACAAGTTGCTTTGTTACAATAAAACTAAATGTGTACACAAAGGATTTGATGCTTTTCTCTCAGATAAACTTAATATGACTTTCCAAGTTTGACTTGTGTAATGTTATTGTCAAACTTTTTGTCACCCTATCTTCGTATTTTTTGATACGCACTTTGCAGGATGACCTCAGGGCTATATTGATTGAGTAAAGGGATTTGAATCAATGTATTAATGTCTCCATAGCTGGGAACCCATCATGGGTATAATTTGCCATTAGTTTCTGAAATCTTTCACATCATTGAGGATACCAGATTGCTGAAAACTCGGTTCTGAATGTGTTGTACTTTTGATTTGTATCTCAAATCATTTCAAAATACGGGCTTTTATTTACTTAGATATTAATAGTGCCTGCCACCACCATCAGACAGACCTGGTGCTCCTCTGCTGAGTTAACACAGGGCAATTGTTCGCATGTCTTCACTGGCACTGTAATATGTGGCCGAGAAGACAGGCTTTCAGAGTAAGAAGTCCGTGTTGGTGGTAAGAAACTCAGGTTAGGAGTACTTTTATCTCAAAGTACCAGCTTTTTAGCATATAGCTCTCCAATGAGACCTGTCTGTGTGAATCCGAAGGAGATGATGGACTGCTCTATCTGCTAAATGCCATTGTGCATAAATCACATTTTGAGAAGCTACCTAATGCATAAGCTTTTTAATGCTGTAAAATATAGTAGCTAAAATTAAATGCCACTTAGCTTTTTCAGAGATGAATTAATGGACAGCCGGGTCAAATTCAAAGCTTTTTGATGTATAAAACTTTATAAATGGAACTACTCCATCAGTAGGCAAAGTGTAACAAAAGCCTGTCTAGATGGATAGTGTGTAATTTCTGCACAGGTCTGTAGCAAATACATCACTGTATACCGGTCAGGAATCTTGCTCCAATAAAGGAACATAAAGATTTTTTTTGACTGGGGTCATTCTCCTTGTTTCATAGAGAAATGTTACTACTTACTTTTGGATTTAGATGATAAGCTAGTTTTTCTGCTTTGTTTTTATTTGTGTTCATTGTGACTGGGAAATGGGGAGAACTGCCCCTTCAAGTAGTTCAGAAAGTATAGCATAGGTCCATACAACTACATGGAAAGGTATGTTTGGAAGTCGTGGGCAAATTAACTTACTTGAAATGTAGTCAATTCCTGAGGGGATTCAGTCTTTGATTTTGAGGTCTCAACATTTGAAGGGCTTTTCGCTACAGAAAAAACAATAGTCACTTGAAACAATATTCATAAAGTAATAACTGATTTATGTTTCACAAAGTGACATCTTAACCAAAACTTGTTTTTGTATGCTGGTGCTGTTAGGTTATTTAATGAAACTACTGTGTTCTGGGGGGTGTGCTCACACGGTAGGACCCCTTACAGGGAATTTCGTCCCGATTAGACTGAGACTACCCTTTAGATTCCCTTATTCCCGGTGAGGGAGTGCTAGGCTGTGAGAAGGCAGAAGGACAAACAGTTTACTGGACAAACGGCCACAAAGGAGGAGTCTGCGTTGTTCCCAACTGCAAGAAAGAGTTTTGGGGCAGGCCCTTAGGTATGTTTCGAAAACTACCAGGTGAGTGGCTTAAAGCTCCTTTGGTACCAGGACATCTAAACAAAAGGGAATAGTGCCTGTTTCGGTAGTTTCTCTGGGGCATCTACTTGCCAAGCTGTGCCATAACTCTGCTTATGAGGAGAGCTTAATAGCTACATGAATTGGGACATAGAGTTTATGTGTTTTACATTTAAAAATTTCAAGGACTGCAGTCGAGGTGGTCTGACCGCCATGACAGGTACTTAGGATTTCAAGCAAGTGACTCTGAAACGCAGTTTGTAACCCTAACCTAAATGTCTTGGGCTGACAAATTTGCTTTAACATCTGTCCTGCTTCACAACTGTGTTAGCTGTTTGCAGACTTTGGATGAATGTATAATTGTGTTTGTGAATTAGTTTAGTAATCTTTATCATTACTGTTTGATAACATCTGGTTTCATGGTTTGACTTGAGCTCATAAACAGATGTGGTTTTTCTGCCTTTTTTGTTAGATTTTGCTATAAACTTTCTAGTTATTGCAAGAATGGAATTCTTTGCGGGGGGGGGGGGGGATGAAGATGTTCAGGATTTCCTGAAGATTGAGACAAACTCTTTAGGAGACAAATAGCAAATTATTTCAGTTGTTTAAAAGAACAACAGCTTATTTGAAAAGTCTATCCCTCACCATAGCAAAAGTCTATTCTCTTTTGTATTTTGTATGCATGGCTGTATTTAATGGAGATTTACAAGTTCTGTTTATAATGAGTCTGTGATGAGAAGTATAAGAAGTGGAGGGTGTGTGCCAACTTGATTAGTTAGTGACATTGCATACTCAGATGCAAATCTAAGGGAGGCAAGTCTAAATGTAGGTGGAGTGATGTCTGCCATACCCAGAAGGAAAAAGAGGTATGAAGGGGGTAGATGGAGATGTTCACTTACGCAGCCTGCTGGGACAGTTCCTTTCAAGTTGATGTTACACAACTTTAATGGTTCATTAGCCAGAGTTGGTTTGGGCTGTTCACTATCCTCTGGATGTTAAATGTGAACTTCAGTTTTTCTAAGAATTAACGATTTTGTGAAACAATCAGCTGAGGGCTGTAGGTTTGTCCAGCCTGGGGTTCTTTGGAAAGGTGGATGTATTCTACTTCGGAACCCCTTTTCCCCTTAGTGGCCACAAAGCAATGAAACACTTGAACGCAAACTTGAAAAATCATTGAGCTCTTCTACATAATTCAGGTGCTGTCGTAACCTCTCAGTTATTTAGCATCAACATTCAGCTAAGGGCACCTCAATAAACCCCACCTGAAAGAGTACCATGTGCCTCCTAGCTTACTAGGTGTTAAATATTTGTCTAGCCTTCAACAACTCTGGTTTGTATTTATGTAAAAGTGTCACTTGTCTCTGATTATGAAGTCGTCATTTCCCCCTCTGAACCATGTTGCCTTTGCATATGTTGGTGTAATTTGGTTGATTTCCCATTGCAGGACTATCTCGGGATTGCCCACATTATGCCACATTTCACTTTTCATTCACTGTGAAGGAATAGGTCAAAGAGGAACTGACATGGTTTCTCCTGTCATTGGAGGGTACCTCTTCAAAGTCAGCAAATAAGCCACCTTCAGTATTAGACCCTTATTCACTTCTGGCCCCGTAAGGT EMBV3_09381 TACTGTTTGAAACGCTGATGGACCTTGTGGGACCCCAGAGATTCTCCAGTGCTGTGGGAT Gene GeneID:505775|SLC16A1:NM_001037319:62_cdna UTR3_Alt 2 NULL GeneID:505775 3 GENE SLC16A1 MCT1 MGC128991 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) EMBV3_32602 ACTCCACTGTAGCTTATTCCACTTCTACAGCGACTCTCAGCATTTTTGTTAAGTCACCTG Gene GeneID:520186|CEP110:XM_002689962:31_cdna Constitutive 0 NULL GeneID:520186 8 GENE CEP110 NULL centrosomal protein 110kDa EMBV3_01901 TTTGAGGCATTGTGTCAGAGAGACCGCATGTCCCGCAAGTGTTTCAGTAGGTTTCGGTAG Gene GeneID:281229|HPRT1:NM_001034035:5_cdna Constitutive 0 NULL GeneID:281229 X GENE HPRT1 HPRT MGC128800 hypoxanthine phosphoribosyltransferase 1 EMBV3_31605 CCTCAAAGGAGGAGTGAAGATAGTTTTCTCGGTCCTGTATTAATAGGAAGTTCTCACGGT Variant GeneID:511090|SUCLA2:NM_001075493:91_cdna 395^557 1 EMBV3_27170 GeneID:511090 12 GENE SUCLA2 MGC140636 succinate-CoA ligase, ADP-forming, beta subunit EMBV3_19029 TCACGTGATCAGGGCCTGCTGAGCTGCGTGATTACTGTCTGCTCATCTGCTTGACAATTT Gene BVT0102_014362 - 1 EMBV3_28465 GK000028.2:2633617-2656887 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087816 TCONS_00199376 TCONS_00201912 TCONS_00167102 TCONS_00167105 TCONS_00070446 TCONS_00201908 TCONS_00167109 TCONS_00152623 TCONS_00070448 TCONS_00167104 TCONS_00062708 TCONS_00199377 13 XLOC_052605 XLOC_121029 XLOC_123557 XLOC_101938 XLOC_101941 XLOC_042224 XLOC_123553 XLOC_101945 XLOC_092388 XLOC_042226 XLOC_101940 XLOC_037435 XLOC_121030 NonCoding TCONS_00199376 XLOC_121029 NonCoding NonCoding - 5:53751904-53753184 - TSS148944 1280 0.38203125 1 0 0.000143270592979489 3.55321988919004e-05 7.07907042547704e-05 0.000132983254255838 0.000133104721227159 0.000238325428959753 0.000187716640257667 0.000438550255834119 0.000783711450701534 7.3319997919907e-05 3.71800578440171e-05 1.71290707391799e-05 6.41863918044307e-05 0.000780329570878623 0.000116541449242934 4.79168614942832e-05 2.49682674966479e-05 6.44154264907136e-05 5.60229022993983e-06 5.94275441754921e-05 1.66092586491844e-05 3.31970121017723e-05 2.64844986868152e-05 0.000143956848512895 1.11994897527035e-05 0.00011864329605095 8.31990479997681e-05 7.45044394608617e-06 2.12494326757787e-05 3.07266940757157e-05 XM_866575.4 NEK11 PREDICTED: Bos taurus NIMA-related kinase 11 (NEK11), transcript 2e-43 181 93.33 0.09296875 0 noncoding 1 1 1 1 0.116881084633565 0.451925179500013 -0.751694190943773 0.000131260366214379 AAGAGCGAGATGGTGGTGGGGGACAGCCCCCAGTGAAATCAGAGGTGAGAGCACAAAGCAATACAGTAGGCAGACTCTGGTTTTTTTGTGGTGGAGATGCTCGAGAATATCCGGGTGGACTCCTGAGGCTCGATCCCGCATTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCCAGAGTGGAATGCCTCCCCGGCTCCCGGCACATGATCAGTGCATGCTCAGTCACGATATCAGCGCCTGCTCAGCCACGTGATCACTGACGGCACAGTCACGTGATCAGCGCCTCTCAGTCACGTGATCACCGTATGAGAAACACGTGATCAGTGAACGACCAGCCACGTGATCACTGCATGTGCGGTCAGGTGGTCAGTTCCTGATCAGGCACCTGATCAGTGCGTGCACAGTCCCCTGATCAGCGCCTGTCAGTCACTGATCACTGCCTGATAAACACGTGATCAGTGCATGATGAGCCATGTGATCAGTGCCCGATCAGCCACGTCATCAGTGCATGCGCAGTCACGTGATCAATGCATGATAGCCACGTGATCAGTGCGTGCACAGTCCCATGATCAGCGCCTGTCAGTCACTGATCATTGCCTGATAAACACGTGATCAGTGCATGATGAGCCATGTGATCAGTGCCCGATCAGCCACGTCATCAGTGCATGCAAAGTCACGTCATCAGTGCATGATAGCCACGTGATCAGTGCATGCTCAGTCACGTGATCTGTACTTGATCAGCCACGTGATCAGTGCCTGCAGAGTCACGTGATCAGGGCCTGCTGAGCTGCGTGATTCCTGCCGGCTCATCTGCATGACAATTGCCAGCTGAGCTGCGTGATTGCTGCCTGGTCACGTGCTTGATTATTGCCAGTTGAGCAGCATGATTCGTCACTGCTGAGCTCCATGCTTATTGCCTGCTGATTGCGTGGTTCGTGTCTGCTCAGCTCTTTGAGTATTGCCTCCTGAGGTCCCTGTTCGGTCGCCACCTGCCGGGGACCAGCCCCAACTGATCCAGGGTATTCGAAGGAGAGATGGCCTAGGCGACTATTTATATGCTAATCAGAGATGTCAAGGATACTAGTATGAGGAGAGCTCAGTAGGAAAATTCGGTGGAGAAAAGAGACTGAGTAGCTTGGTTTACGCGGAAGACCAATCAAACTTCAAGACAAGAAGTTTGCAGCACTTACGTAGGCCGCAGGCGCCCTCTCGCATAGCGGAAGGTGCCTCACACTAGACACCTTCTCGAGTGGGTCTTAGCAGCCCAGGCATAA TCONS_00195023 TCONS_00195024 . 3' 234632 TCONS_00195023 TCONS_00195024 . 3' 235911 EMBV3_11593 CAGCTGCTCACACTAAAAACTGAACACAAGCTGCACGAGGCCAGAAATGACGTCCGGAAG Gene BVV0102_090179 + 0 NULL GK000001.2:118657812-119151122 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001933 TCONS_00001938 TCONS_00001929 TCONS_00001930 1 XLOC_000480 Coding TCONS_00001933 XLOC_000480 NonCoding Coding - 1:118991712-119076496 - TSS999 3875 2 TCONS_00001933_9 94 0.0276129032258065 3 0.954330467192716 0.000685565035385677 0.00186352349808228 0.000219763966210977 4.04831818068379e-07 4.54903812451977e-09 7.3898163371164e-07 0.000429003327394417 1.96553850979377e-12 0.000723219056924601 1.23671037835075e-54 4.66583903011774e-05 6.64208615873175e-05 5.5436345079777e-07 0.000481650873583105 0.000166221801829573 0.000390646570511314 4.74280374552254e-19 1.93018717068431e-05 0.00030172053812769 0.000618406626359515 0.00106306989584652 6.85301710086265e-10 1.16474754356658e-07 5.21879845077252e-05 0.000625447397258007 0.00074726244453949 0.000201404471738061 3.46724360772282e-05 3.0884446600345e-05 2.93220203947155e-10 XR_228875.1 LOC101905340 PREDICTED: Bos taurus uncharacterized LOC101905340 (LOC101905340), 2e-80 306 100.00 0.0433548387096774 NM_004902.3 RBM39 Homo sapiens RNA binding motif protein 39 (RBM39), transcript 6e-11 75.2 79.55 0.0219354838709677 0 noncoding 0 0 0 0 -0.0509082294418649 0.745309050542745 0.0904841551657677 0.192310712668613 GTTTCTCGAGATAGCCTGTGCTGAGGATTCTGTGAGGCACCATGTGCTGGTGTGTGTTGGTGTGCTGGTGAACATGAGCACTAGGAAGTGCTGAGGCCATCACAGCGGTGGATCCTGAGGCCTCAAACATTTTGTGGGACATTACAAAACTCATGTCCTCTGTGCCCATGGAACTTCATGACTCAAACAACCGTGACGGAGGCGCCAGGCTCACTGGCACTGTGGAAAGAAAGTCTGAGCGGAATGCTTCGTGGCCAACTTTCACCAGGGTCTTAAATATAATTTCTTCAAGGTGCTGAGATGAGTGGATGAAGAAAAAGAGAAGAACTAGAAGCTCCCTTGGGAGTTCTTTTCATCTTTTCTGCTGATTTCTGCCCTGTGTTGCAGGGAAGGTACGAGAAACTAAGAATCAATAGGATTTGCTGGCACCATATTGCTCAGGTGTACACTGAAATTAGACATCTGTTCCATCCCTCACCTGCATTTACCTAGTTTCCTGGAGCTTCCATTTATAATGCTAGGCTCTAGCTGCCCCGAAATAAGAAAATCAAAAAGAAACACACAGCTAGCATATATATGACATAAAAATGAATCTGACCAACCATCAGGAAAGGTATTCTGTCCCTTTCCTATACACTATACACAGGCTATGTGTACATTACCCACACTGGTCTACACTTTTCCCAAAAACTCTGAACTGAAGACTCTCTGTGACCCCCAAGAAGCAGTGTTTTATTTTCCTGAATCATACCCTTGAATTGGCACTTATATCAAACAGGCACAAGGAGAAGGCTTCTCTGAGACTAGCGGACAGAGAATTGTTATAAGTGCACCTTTCTCTCTCAGATGATTTGCCTAGTCCCTGAGGCTAGGGGACCAGGCCCTGAGCCTGTTAAAGCCCCCACAGAGAGTCCAGTTTATGGTAGGTCTCCAGAGGACAGGTTAGAAGTCAGAACCCTAGAGAGAGAGCAGGTGGAGGAGATGGCTAGGATGAGAACAGAGACAGAAAAGCCAAACGTGGAGGAACATTTAAAGCCCGAGAACAGGCTGCTTCTGCGGTCCCCGTGATAATGCTGACTTGGATCTGATTTTGTCACGGAGTTCCAGTAAGGCGGGAACAAAGCCCAAAGCGGTGTCAGGTGGCTGCAGCAGGGACACAAGGCCACAGCCGGCTGGCAGCTAATGAACTGGCCGGAGCGAAACCAGAGAGGGTTCAAAGACAGTGGAGAGTGGCACCTGCCAAGCCCTGCCAAGGACTGATACGCCTGGGAAACAACGAGTGAAGCTTCAGCAATTAGCAGCAGTCCTCGGCCCTGGGTGCTGGGTGGCACTGATCTATGACACAGCCTCTCTGTCCTGGCAGGCTTCGAGAGGGCAGAAAAGACATTCTCCTTTCCACAGGGATTTCCATAGTTACGATGGTTGTCTCAGCTGCTATTTTTGGAAACAGTCTGTCACAGGTTAGCTATGAGCGCTCCTTTATGATGTTGTTCTTTTGTGGTTGACACCCTACCTTGTAAAAGACACTTTTCTGTTCTTGGCTTCAAGAAGTGACCTGTCTAGCTATTACTATTACTCCATGTTCGTGGTCATGATTGTAAAGTAGGGTATACATATTTAATGCATAGGTAAGCAAGAAGCCAGGGTCACTAATCTTCATTTTGAAGAGTACCATGCTTGTTGCAAAAACCATGCAGCAGTTTATAGAATGTTTAGTGCTAAGGCAGCTGCAGTATTTCCTGCCAGGGTGCCAGGGTGCCAGTGAGTTTGGAGATGGAGGAGAAGGCTGGAAACTGCATCTGCATGGCTCCTTTCACAGTATTGAGCAGACCTCAGTTCTCTACATCAAAGAGTGAGTGGGGACTTTAGTCCTAACTAAGATCCCCACCCCCCACCCCCAGCCCTCCTGCTTAGCTTAAGCCTTCATTTCATCCTGACTTGCAATCTTTTCCCACCCATCCCAGGCAAAATCTTGTTGGGTTTAGCATTTTAGTCTCAAATCAACTTCCTTGATTTTCAATATGTTCATTTCAATTTAAGTAGCAACACGAGTTAGCCTTTCCTCCTCTCTTTTGAACCCACCATCTCTTCTCCATCCCCCGCAGTCACAGCCTAACATCCGTTCCCTCTAAGCTCTCTCTATTGTAAGAGCCTCCCACCTTTCTCCCATTCATCCTGATGCCTGAAGGAACTCTTAATGTATATGTAAGCCAGTCACCCCGCTTCTGGAACAATTCACTGCAGTATCCAATCTGACTCCCTTAGCGTGACATCTCCAGGCTTTTATGATGTGACCCCTGCCTACCATTCCTGGAAAAATGAAAATAGCTCTTTCCATTGATGCGGAGGTGAACAATTGTAATGAAGGCCTTTGTAAAGGGGCTCCAGGATTAGGAGGTACTGAACACTCTTCAGCATGTTGTAGCTGCCCCCAGATGACTTCCATTTCCACAGAGCAATTTCCGCCCCAGAAATAATGACCATCATTTGATTCTGCCCCAAAATGAACTCTCTTAGGCTCTTCCCCAGGTCAGTCCTACAAGGGGGTGGGGCTTCACATCAGGGCAGGTCACAGAGACATTCTTTTCCCAGGTAAATACCTTTACCTTGGCAGCATTTGCCATTTAACATGGGGGAAAATACAAGCAATGGAAGAGGATTAGTGATGCTGGGGAGCTCCCTTCACCTGGTGACATCAGAGCACTGGAGGAGACCGCCTATCTGTGCAGCTTTCCTTTGCAGGTGACTTTTCCCTGGGATGAGTGAGTACTCATTTTTGAACCCCAACCAAAGAGTGCTTTGGAAGAACAGCCTCAGCATGGTCCTGGCCTCCCCCTCCCCCAGGACTTGGAGGTTAGGCTGCAGGTGGTCTCCTCATCCCAGGAGCACGTTTCTTCTGGAAAGATTGCACTGGGGGGCCTTCTATCAGGAACACTTCTGCACCTCCATCAGGCACCACCCACACTCAGCCAGCTTGTGGTATTTGGGGGCTGTCTTACTTTCTCAGAAGTTAGGGAACAATCTGGAAGGGCCAGTTTTGTGAGTTTTCTCCAACCTCACAGATGAATTCAACACAATGTTTAGCAGAGTACAAGACATTCTGACCTACCTCCTACCCTTTTGGGAAAGCTTAAAAAACACATCAAACACAAAGTGACGGCACTGTCACCATTCGCCTTCCGGACGTCATTTCTGGCCTCGTGCAGCTTGTGTTCAGTTTTTAGTGTGAGCAGCTGCTTCCAAAGAGAAGTCCTCATCCAGAGACAGAAATGGTTGGATGGCATCACCGACTCAATGGACATGGACAGAGGAGCCTGGAGGGCTACAGTTGGACACGACTGAAGTGACTTATCATGCACACACGCAATGGACATGAATTAAAACTATGTTGAAAAATAAAAACAGAAAACCCCATTCAAATTGTCTAAAGTAATAATAATATAAATTATTTGTTCAGTAGTAATGATGTTTCAGGTCAGGTTTGATCCAGCAGCTCACACAATGCCACTAAAGTCAACTTCTGCCTTGTCATAACATGGGCTCCACATGACATGAGCTGCAGCCCACCTGGTCCTATACCCTTCATCCCATGGCTACAGCAACTGTAGGACTCACATATTCACATTCCACTGCCCAAGAATAAAATATCTTACAAATAGAAAAGAAAATGTTTCTTTCTGAGAAGCCCTGGCAAGCATGTTACATTGTACTGTCTCAGATTTGTCTACATGCCCCAGAAATAATGCCACCCAAACCACAGGTAAACCCAGTTCTTTCCCCACAGTGAGACCATCTCCCTGCTAAATATGACAAGCATAGTCATAAGTGTTATTCTGACTAAAATTCTAAACTCTTATCCTTTGCCTTGCTATAAC TCONS_00001931 TCONS_00001931 s 5' 0 TCONS_00001931 TCONS_00001931 s 5' 0 EMBV3_01173 GTGCTGATGTCAGTATGAGATATCGTGTCAGTCTGTGGTACAGAATCGAGGTGGACGGTG Gene GeneID:525095|PIGN:XM_002697784:358_cdna UTR3_Alt 2 NULL GeneID:525095 24 GENE PIGN NULL phosphatidylinositol glycan anchor biosynthesis, class N EMBV3_31476 CCTGTATGCAGGTCAAGAAGCAACAGTTAGAACTGCACATGGAACAATGGACTGGTTCAA Gene BVV0102_000923 + 0 NULL GK000024.2:15476129-18145196 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088598 TCONS_00249521 TCONS_00099942 TCONS_00252864 TCONS_00110456 TCONS_00144588 TCONS_00218274 TCONS_00218277 TCONS_00008086 TCONS_00132043 TCONS_00101640 TCONS_00254635 TCONS_00115001 TCONS_00030483 TCONS_00171866 TCONS_00011808 TCONS_00243312 TCONS_00218276 TCONS_00100732 TCONS_00071724 TCONS_00230131 TCONS_00232908 TCONS_00012797 TCONS_00142376 TCONS_00218526 TCONS_00012816 TCONS_00071749 TCONS_00236497 TCONS_00071353 TCONS_00073978 TCONS_00193501 TCONS_00165751 TCONS_00029922 TCONS_00219636 TCONS_00008648 TCONS_00037787 TCONS_00189372 TCONS_00189489 TCONS_00048941 TCONS_00008169 TCONS_00117370 TCONS_00165726 TCONS_00168229 TCONS_00161666 TCONS_00168614 TCONS_00007101 TCONS_00056889 TCONS_00104494 TCONS_00236499 TCONS_00218818 TCONS_00161021 TCONS_00236498 TCONS_00193503 TCONS_00112292 TCONS_00209812 TCONS_00220641 TCONS_00231219 TCONS_00168613 TCONS_00022068 TCONS_00048981 TCONS_00194551 TCONS_00065645 TCONS_00012810 TCONS_00168615 TCONS_00230480 TCONS_00072891 TCONS_00205629 TCONS_00168225 TCONS_00198326 TCONS_00201076 TCONS_00193498 TCONS_00153620 TCONS_00130153 TCONS_00198476 TCONS_00218279 TCONS_00193500 TCONS_00193505 TCONS_00057790 TCONS_00048178 TCONS_00074201 TCONS_00161073 TCONS_00168612 TCONS_00222994 TCONS_00218278 TCONS_00254051 TCONS_00012799 TCONS_00132044 TCONS_00021765 TCONS_00245738 TCONS_00125899 TCONS_00073361 TCONS_00055055 TCONS_00008309 TCONS_00218275 TCONS_00104491 TCONS_00057693 TCONS_00102492 TCONS_00220928 TCONS_00179344 TCONS_00031788 TCONS_00193502 80 XLOC_053384 XLOC_152464 XLOC_060185 XLOC_155805 XLOC_066360 XLOC_088594 XLOC_131667 XLOC_003646 XLOC_080693 XLOC_061727 XLOC_157567 XLOC_069415 XLOC_016736 XLOC_103929 XLOC_007358 XLOC_149975 XLOC_060974 XLOC_043494 XLOC_139623 XLOC_142390 XLOC_007928 XLOC_086801 XLOC_131846 XLOC_043519 XLOC_144488 XLOC_043124 XLOC_045738 XLOC_117497 XLOC_100621 XLOC_016177 XLOC_132955 XLOC_004205 XLOC_021616 XLOC_115411 XLOC_115528 XLOC_029072 XLOC_003729 XLOC_071536 XLOC_100609 XLOC_103025 XLOC_098553 XLOC_103146 XLOC_002663 XLOC_034692 XLOC_062393 XLOC_132137 XLOC_097913 XLOC_068189 XLOC_128323 XLOC_133958 XLOC_140708 XLOC_012739 XLOC_029112 XLOC_117779 XLOC_040364 XLOC_139970 XLOC_044659 XLOC_124694 XLOC_119981 XLOC_122724 XLOC_093383 XLOC_078864 XLOC_120130 XLOC_035587 XLOC_028310 XLOC_045958 XLOC_097965 XLOC_136300 XLOC_156989 XLOC_012438 XLOC_150819 XLOC_077332 XLOC_045126 XLOC_032864 XLOC_003867 XLOC_035490 XLOC_061878 XLOC_134244 XLOC_109117 XLOC_018033 Coding TCONS_00102492 XLOC_061878 NonCoding NonCoding - 2:59615943-59626278 - TSS76299 4566 2 TCONS_00102492_4 120 0.603810775295664 2 0.55835107412425 0.00402757565469682 0.00459854681208556 0.0044666863162069 0.0025976903075525 0.00324157669816701 0.000747477827251594 0.00275194633784622 0.00212045692735038 0.00250158236731291 1.5148747486442e-05 5.01354202376388e-07 0 0.000179083499029667 0.000657120975249836 0.000244091924947248 0 0 5.49517883305758e-06 0.0029006282682189 0.00254523932471703 0.000701684407781456 0 0 6.47430723182927e-05 0.00347329550687117 0.0021191301506434 0.00188936816143644 0 5.31603872429603e-06 6.58370824166128e-06 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1324 88.36 0.227770477441962 1 noncoding 0 0 0 0 -0.596956661307764 0.0268363067349569 -0.0518187942752532 0.287062806245444 AAAAAAAAAAAGTAATAATAATTAAAGCAGATGTACTTTGTATGTTTGATAGGCTAAAAACAGGCTGTTTTGCTTAACATAAAATTCAAGTTACTTCATATATAAGCTGGAATGACTTCTCCATACTTTAATATGTGAAAATTTCTTTTGTCAACTGCTAAGGGAAGTAAACTGAACAGAAAATGAAAGGAATGAAGCAGTGCTATTACATTCTTCTGATGCAGTAGAGCAGAGTCATTAAAGGGTTGATCTTCTGTAGCCAGACCTGGGTTCAAATTCTGTTTCTGTGTTATTAACTTTGTGAGCTTGCTTATTAACATGTGTTTCTGATGTTTTGATAACGGAGACCCCTGGAGAGGCTGCCTCTCCCAAGTGTAGCCAATTTCATTTGGAAGTGCACCTTTTCCCTGCAAACCAGCCAATCCAGAGTCCATACCCTCAACAGCCTCCTTTATAGGATTCCTGCTCACCGGGGCTCTCTCCCCCAGTCTTAATCACCCCTCCCAGACAAATAGGGGCGGCCCTTATGCCCTAGAGCCAATCCTAAGCCTGTTTACCCTCTCTCACCTGTCCCTTACCCCGGAAGGAGAATGAAGTCTTTTGTCCACGTGGTCCTCATTCTCCTTCTGCCTCCTGACCAACCCTGCTGCTCCCTGCGTGATCTTCCATGGCGGGGCATCACTCGGTGGTATGGCACACCTCCTACCTAGTCTTGGGAACTTGGATTTTAAATGTAATCACAACAAACTGTGGAAAATTCTTCAAGAGATGGGAATACCAGACCACCTGACCTGCTTCCTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATCAGGAAAGGAGTACCTCAAGGCTGTATATTGTTACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAAACACTGGGCTGGAGGAAGCACAAGCTGAATCAAGATTGCAGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGAGAAGAAGAACTAAAGAGTCTTGATGAAAGTGAAAGAGGAGAGTGAAAGAGCTGGCTTAAAACTCAACATTCAGAAAACTAAGATCATGGCATCTGATTGCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGACAGACTTTTTTGGGGGGGGGCTCCAAATTCACTGCAGATGGTGACTGCAGCCACGAAATTAAAAGACGCTTACTCCTTGGAAGAAAAGTTATGACCAACCAAGATAGCATATTCAAAAGCAAAGACATTACTTTGCCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTATTGGAGATTCCTGAGAGTCCCTTGGACAGCAAGGAGATCCAACCAGCCATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGGTGCTGAAGCTGAAACTCCAATACTTTGGCAACCTGATGTGGAGAACTGACTCATTTGAAAAGACCCTAATGCTGAGAAAGACTGCAGGTAGGAGGAGAAGGGGATGACAGAGGATCAGATGGTTGGATGGCATCACTGACTCAATGGACATGAATTTGAGTAAACTCTGGGAGTTGGTGATGGACAGGGAAGCCTGGCATGCTGCAGTCCATGGAGTCACAAAAGGTTGGACACAACTGAGCAATTGAACTGTACCGAATAAGATACTCATTTAGTGAAGGAGAATTGGTCTGAATTGTTTGCCCACCAGTGCTAGAAATGGGATTTTTATTTTTGAAACACATTTTGCCTAGGCAGTTTTCTTTTTTACTGTTTTCCTCAGAAGTTTGAAGTCATTGCCATTGTCTCTTATATTGAATAAAGCTTGGAATTGAATAATGTTAGTGTCACCTTCACAATGAATTTGAGTTTTCTGCCTAGGTATCCAGCCTAAGTATCTAAAAATAATTTTTCTGTTCTTGACCTTTTATAGATTACCTACTGTATATTTGTAAAAAGCTTTTAGAATAAATTTTTCTTAAAAATGAAATAGAAAACATCTTGATATGCACATTTTTGTGTTTAGAAATTAAAATATTCTTGTATTATATTTTGAATGTTTTCCCCATTTCCTGAAGTGTTCTCTACCAGTTAACATCGTGGTGTACTGCTGTCTGTTGAATTTCTTTAACTTGCATTTACTATCTTTGTCTTTTTATTTACTGTGTTTTATATTATGTTTTACATCTATATCAGTAATTTGAGTAACAGAAATATTCCATTACTTTCTAATTAATTTAAATACATAATGATGTTTGGGGTTCTCTTTCTCATAATAATGGTTTTTGTTAAAATATTAGTAGTTCACTTTCTATGCATCATTTTGCTTTAGTATATTTCTGAGTTCTTATTTCACTAAGATTTTATAATGTGAAACAATGAGAGACATTTGCTTCCAATCTTTGTGCTATGTTTTCATCTATCATGGACTTATTTTCTGTAGTTTGCATACACAATGCATTTGTTAAGGTAATGCGAGCTACAATAACATTAAAAATTATTATCTATAACGTTTCATATATGATAGAAGTTTATGTCTTAACATGGATGTTCCTGAGAGTAGAGAGCTCTCTGACAAGTTTCTTCCCAAGAATCCATGCTCTTCCTATGTGTGGCTTTACCATTTTCAACACATAAGTTTCAAAGTCAAAGTATTTGTATTAAGGTGGTAAAAATGCAAACAACCGTACTGTGTCTCATGTGGAACTTTTGAATGGGCCAGTCCTTTCTCCCTTCCTCCCTTTACTCTCCCTTCCCTTTCTTCTTCTTTCATCTCTCCTTTTATTCTTTCTTTAGGCTGACCTCATTGTCAAGATTGCTTTATTTACTATTTTGCTCCTTTTTGGGAATTTCATCTACACATTCTGTTTTCTCTGATAAATTGTTGTTAACTTTTAGACTCTCCCCTTGGAAGTGTATCTTTGCTTTTTTTTTTTTTTTAATCATGAGATATAGTAAGAGGTACTTCATTATTTCTATTTTTCTATAGCCTGAGGAAATGGCAAAGAAATGGGTAAAACCCAGCTGAGGTGGTGTGAATGCTTAGTTGGAAGAGCTTGAATCTGTTCCCTTGGAGGCTTTCATCATGGAAATAATGAAATAATAACACGTACTACTGTGGCTAGGGTGAACTGGTTACACCATTCTTACGGGAATAGACTAGAGAGATTGGTTTTCCAGGATTCATTGCACTTAATCTAGGTAGGGGAGGGAGGGATACCCTATTCCTTGGCAACACACCTTTATAGAGGCCTCAAACCTTTGCATCTGTCCAAGAAGGTTAGTTCGCTACTTCTTTTTTTTCAGTTACCTATTACAGCGTTTGCAGTCTTCTTTTCAGTATCATTGCCACCATAATCCAGAATTTTCAAAGTGTTCTCAAGTATGCAAGTTGTTAAATTCCTCTGGAACCTTGGATGACAGAATAAATATCCATTATCATGCAGTTACACAAAGCAAAACAAACATGTCACCTCATGTTCTCTGACTATAAACGGGAACAAATAATCGACCCCTGATAGATAAGAAGCCACCTTAGTTTAAAAATAAATATCCTACTTATATCCTAATAAAAGAAGGAAAGTTGATTCCTAAATCTTATGCCCTGTAACTGGGCTTTTAAAACATTTCCTTTTGCCAAAGCCACACAGAACACTTAGGACTCCCCTAAGAAAAAACTGCCTGGGATTAGTTGATCCCAGCCCTGTGCTAAGTGAGAAGTTCCACCTCAAAACTCTCCTTTTGGCAAGGTAAATAATATATTTAAGGATAAGATATTTATAGGTCAAATTTAGATTTATTTGATGAAAAAATGGAAACAACTTTATTGTTCCCAAATAGAGAAACAGTTATGTTAACAATTATAGTTCTCAATCATGGAAGATTGTGATGCTTAAAAATGTTTAAAGAGTTGTGAATGATACACCAAAAACTATGGAAATGTCCTAACTACACTGTCAACTCCACAAGGTCAGATACCACGTCTATGCTTTTATCCCCATGGCACAAAAACAGACTGAAGGAGCAAATAAATGAAAGGTCATATCTGACTACATTTGACCTTTGAACAACATTAGGAGTGGGTGTGCTGACCCACACACAGTCAAAAATCTGCATCTAACTTTAGAGTCAGCCATCTGTATCCAAGTTTCCACATCTACAACTTCAACCATCCACTGATCACGTAGTACTATAGTACATATTTATAGAAAAAAATCCACATATAAGTGGATCTATGTAGTTTAAAGTTATGTTCAAGGTCAATCTCCTGTCAGAAAAGGCAAATTAGGGGCATTTCCTGGTGGTCCAGTGGTTAGGGCTCAGCTCTCACTGCCAGGCCCTAGGTTCGATCCCTGATCTGGGAATCAATACCACATAAGTGGTGCACTATTGCCAAAAATATAATTAAAAAAAAATAAAGAAAAGGCAGATCAGGTGGTAAG TCONS_00105363 TCONS_00105364 TCONS_00105365 TCONS_00105366 TCONS_00105367 TCONS_00105368 TCONS_00105369 r 3' 122305 TCONS_00105363 TCONS_00105364 TCONS_00105365 TCONS_00105366 TCONS_00105367 TCONS_00105368 TCONS_00105369 r 3' 132639 EMBV3_11266 AGGAGAAAATGGGAAGAATGCTAGGGAGCCCCGGCTTTCAAAGAGAGAAGAATCTATTGC Gene GeneID:505477|RGS12:XM_002688421:43_cdna Constitutive 0 NULL GeneID:505477 6 GENE RGS12 NULL regulator of G-protein signaling 12 EMBV3_22360 CCAGCAATGGATGGCAGGGGCGAAATTAACCAAGACGGAAGCCAGGATTTGGGATGCAGA Gene BVV0102_176925 + 0 NULL GK000030.2:13906882-13915386 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246313 TCONS_00246311 TCONS_00246312 TCONS_00246314 1 XLOC_150955 Coding TCONS_00246313 XLOC_150955 Coding Coding ELF4 X:13911522-13952814 j TSS184692 6351 1 TCONS_00246313_6 662 0.0695953393166431 9 0.846407207381754 8.19761344235357e-07 0.000142064847010236 1.96873736060386e-10 0.000370413493212788 2.54688872527262e-08 4.56369435916671e-06 3.14918737530156e-27 0.00011504913323842 0.000138894926982492 1.73213136800709e-08 3.8335886875481e-12 1.85259313450279e-15 0.000283457826765766 1.67149721514261e-08 0.000235303828452859 4.6584641963487e-10 0.000126972088201314 1.15731941202282e-61 4.57058861017572e-05 0.000102207322559711 1.50298569630866e-06 8.96920761695759e-13 0.000584214012305401 0.00126514248671463 8.1459085038499e-08 0.000114616775046118 0.000175645017016558 0.000764377114345446 7.03585106778775e-05 0.000511569458463536 XM_005227486.1 ELF4 PREDICTED: Bos taurus E74-like factor 4 (ets domain transcription factor) (ELF4), transcript variant X1, mRNA. 0.0 6814 100.00 0.594709494567785 XM_005262389.1 ELF4 PREDICTED: Homo sapiens E74-like factor 4 (ets domain transcription factor) (ELF4), transcript variant X1, mRNA. 0.0 2998 83.74 0.438198708864746 TCONS_00246313_6 sp|Q99607|ELF4_HUMAN ELF4_HUMAN ETS-related transcription factor Elf-4; 0.0 1142 87.93 0.998489425981873 2 coding 0 1 1 1 -0.0323063645784889 0.774663383103331 -0.00960647401133789 0.876980503355748 CCGGACCAGCCTGCCCCGGCGCCGAGGAAACACCGCGGCTCCAGTGGGCCCTGCAGGCCCCACAGTCAGCTCTCTGAGGAGACAGCATGGCTGTTGCCCTGCAGCCCAGTGACCTGATCTTTGAGTTTGCAAGCAACGGAATGGATGACATCCACCAGCTAGAAGATCCCTCCGTGTTTCCAGCTGTGATTGTGGAGCAAGTTCCCTACCCCGAATTACTGCATCTGTACTCAGGCCTGGAGCTGGATGACGTTCACAATGGCATCATAACAGATGGGACATTATGCATGACACAGGATCAGATCTTGGAGGGCAGTTTTTTGCTGGCAGATGACAATGAAACCACCTCACAAACCGTGTCAACCCCTGAAGTCTTGCTCAACGTCGAGTCTCCTAACAACATCCTGGATGACAAGCAGATCTTCAGCACCTCCGAAATGCTTCCAGAGCCAGACCCTGCTCCAGCCATGACACTGCCCAACTACCTGTTTCCTGTCTCTGAGCCCGACGCCCTGAACAGGGCTGGTAACACTGGTGACCAGGAGGAGAACTGTCTGGAGGAGAAGGTCCCCAGAGAAGAGAGCGCTAAGAAGACTGGAAAATCCAAGAAGAGAATCCGGAAGACCAAGGGCAACCGCAGTACCTCACCTGTCACTGACCTCAGCATCCCTATTCGGAAGAAATCGAAGGATGGCAAAGGCAGCACCATCTACCTGTGGGAATTCCTCCTCGCACTTCTGCAAGACCGGAACACCTGCCCCAAGTACATCAAGTGGACCCAGCGAGAGAAAGGCATCTTCAAGCTGGTGGATTCTAAGGCAGTGTCCAAGCTGTGGGGGAAGCAGAAGAACAAGCCTGACATGAACTATGAGACGATGGGCCGGGCACTCAGATATTACTACCAACGAGGCATCCTGGCCAAAGTGGAAGGGCAGAGGCTGGTGTACCAGTTTAAGGAGATGCCCAAGGACCTGGTGGTGATCGAAGACGAGGATGAGAGAAGCGAGGTCACAGCCACATCCCCTCAGGCCTCTGCTCCCTCCACCTCCTCTGGTGGCAGCTCCCGGAGAGCCAGTTCCCGGGTCTCGTCTAGAGCTGCCCCGCAGGGCAAGGGTGACACTTCCTGGGAAAAGCCGAAGGTGCAGCACGTTGGTCTCCAGCCATCTGCGAGTCTGGAATTGGGACTGTCTATAGACGAAGAGATCCCCACTACCTCCGCCATGCTTGTCTCTCCACCAGAGAGCCAGGCCAAAGTCACCAAAGCTGTGAGTACTTCTGCCGTGCCCAGCAGCATCCACCTAGGAGTGGCCCCCGTCAGGTCGGGCTCGGCCCTGACCCTGCAGACCATCCCGCTGACCACAGTGCTGACCAATGGGCCTCCTGCCAGTACTACTGCTTCAACCCAGCTTGTTCTCCAGAGTGTTCCACCTGCTTCCACCTTCAAGGACACCTTCACTCTGCAGACCTCCTTCCCCCTGAACACCAGTTTCCAAGAGAACCAGGTGGCAGCACCAGGGGCTCCGCTGATTCTCAGCGGCCTCCCCCAGCTTCTGGCTGGGGCCAACCGTCCGACCAATCCGGCACCACCCTCAGTCATGGGAGCTGGCCCAGCGGGGCCCAGCTCTCAGGCCCCTGGGACTGTCATTGCGGCCTTCATCAGAACTTCCGGTGCCACCACAGCCCCTGGGGTCAAGGAGGGGCCACTGAGGCCCTCGTCCTATGTGCAGGGCATGATGACTGGGGCCCCCATGGAGGGCCTGCTGGTTTCTGAAGAGACCCTCAGGGAACTCCTGAGGGAGCAGGCTCACCTTCAGCCACTTCCAAGCCAGGTAGTTTCAAGGGCTTCCCACAATCCGAGCCTTCTGGGAAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCCCAGTGGCTGAACTTGAGCTCTCCTCGAGCTCAGGGTCCCTGTTTACGGCTGAGCCTAATGTAAGCACACCTGGGAGCCTGCTGACTAGATCCCCAACCCCAGCCTCCATCTCCCCATTCAACCCCACTTCCCTCATTAAGATGGAGCCTCATGACATGTAAATGAAGGGGGTCAGGGGGAAATGTGACTGCCAGGCAAAGTTGAGCAGCATTTGTACACGGACTTCCTCTAAGAGAGACTGACTGAAGTAGTACACCAGCCCTTACATTTCAGCAGGGTGTCAATACACCAGACCCCCATGCCACCCCTGCTTGGTGTCACCATGGCCAAGACAGGCCCAGTTGGAGCATCCCTGGTGTCAGACCATGGCTTTTAAGAGTACTAGGGGATATGCTCTTGTCGGGGTAATGGGCTGACTTCCTGATGGAGGCAAACCTGAGATGTTTGTAACCAGGGCTGGGGTAGGGGCTTCATGAGAAGAGTCTTTTTACCTGGCTGTATTCCACCATCTTCGTTCCCTCCGCAGAGTATTTACTATGCCATATGTGAATATCTCTGTATGTATTTGTGTGTACTTGTGCGTCTTCTTTGGTGAGGATGGGGGTGTAGCTATGAGGTCTTCAAGGGTGTGTGTCTCTCTGGAGGTCAGCCACAGAGATGGGGAGTTTTTTGTTTGGAGGGAAAGCATTCTCCAGTTCCCTTTGTACAAGCCAAGATTTGTTCTGAGACTATGGGGTACAGGTTTGAGCCCCCAAATCTGGAGAGATGTCACAGAGCTGGGGTAGGTCTGGGGAGGAGAGCTTTGATGGGTGTGTTTGTTGGGGAAGACGGAATTGTAGGGGACAAGGAGAAAGCCATGTGGGATAAAACCCTGAAGAGAGGGAAGGAATTCAGCCCTGTGGAGCAGCCCCACAGGCTAGACCGAGGTCTTCTTGGGCTCAGCCTCATTGCCCACCAGTCATTTGCTAGCAGGCCAAATCCTTAATCTCCCCAGAGTGTTTTGTGCCCCTCCAGGGTTAGACTCAGCCACAAGGTCCCCAGGGGAAGGGGGCTAAATAATGGATGTTTGCACCCAGGGCTTGGGCTGTAATTCTAGCCTTCATGGCCACCCTGCTCTGCATCCCAAATCCTGGCTTCCGTCTTGGTTAATTTCGCCCCTGCCATCCATTGCTGGCAGGCGGTGCAGGGGACGTCGGGTAACCACATGCTCGGGGTCTGCCTCCGTCCCTGCTCGTGCCTCCTTGCTGGTCAGCCTGCTTTCTATTCCCCTCACAGATCTGCCCATGTACCCACTCCCTCTATGGCTGCAGTAGACCTCCTCCAGTGGGCCGAGGTCCTTGACGGCCAGCCTTCTCACTTCACCCTGACTCCTCCTCCACGAAGATGGGGCCTGAACCTGTGAGCTCCTGTCCTTTCTGTCCTTCCGCATGCCTTCCTTCCACCTTTCCTCTTTCTGAGAAGGGGGTCAGCCAGTTATCTCTTAAAGTCCACCCCTCGGCAGGGGGCCTTGATCCCCTCCTCTCTCTTCTGTGAATTTGCCTTTGTCTCTCCTGCCAGGTTTGGGAGCAAGGCTGAGAGCTCTACTATGTCAGCCTCAGAAACAGCGATAGGATCTGGTAAATGTGGTTACTGTGAATTGGTGCCTCAGGACCCTTGCTGTGTCCTTGACACAAAACCAGCCACTTGATCTCACTACCTCCCCTGGTTGCCCTTCTCTCTCTCTCCTTCTGGTCACTGCCAAGCCCATTATCATGCTCTCTCACCTCTTGTTCTCCCCCTTCTCCACCCTGGGAGGGAACCATGTATGGTTGTGCGGGTATATTTCTTACATGTCTCCAGCACTTGGCATTAATGTCCCTTTTTCTAATAAAATCAGCTTATGATGACAGCTTCCTGGTGGTGGAGAGCAAAACATCTTGAGAAAGGGTCACCTTTGAAAACAACTTTACACAAAGGTGCCACATGGGTTAGGAGTGGCCCTGCCTCCTCACCTGAACCCCATAGAACTCTTCATCTGAAGTCACTGATACCCTGGAGATGATGTCAAATTTCTTCTTCATAGTTCTTGGCCCCTTGTAAGTCCTCACAGCACATGACACTACTTCCCCTTCCTCTGTCACCCTCTCTGTGCCCTTTCTAGATCCACATCTACATTCACTGTGGGCACCCCACGAGCCTCAGCCATCCTCCTGGCTCCAGTGAGGCTCTTCAGGTTGGGTATGGAATCTAGAGGCCCAGCCCCTACTCTTCTCAGCTTCTGGCTCACATTTCTCCTGGATAGTTCTACCTAGATGATTGTCAGACCCTCAAAGATTGTCCCTCTATCAAAAATGGATTTTTGGAAGTCTTCCAACACACAAAACCATTCCAGACAAAAAGGCTGTCATGACTTGCCTATTTCTGTTATTGTCCTGACCTTCTAAGCTTGACATTTCAGAGCCATCTGCTGGCCACTTCACTTGACCCTGACCCTTACTCGTTGCCTCAAGTCCGGTGTGGTTTGCCATGTCTCTCCAATCCAGCCATTCTTCCACACTTGAAGAGAGCCTCCAGCCTTGTTCAGCCTCCCCCAGAGCTTATCCCCTTCCCTGGACATATCAGCAGTCCCCCAGTGTGATCTGAGTCACCCCCTCCAACCTGCCAGGGCACCAGCTCTATTCTTCCTCTGCCAAAAAGTCTCCTGGGGCTTCTCACTGCCTACAAATGGGGGTAATACTCAAAATCCTTAACTTCCAATCTGTTCTTAGTGGCTGGGCATTAACCCTTTATTGTCTGACTCACAAGGCAATCCAGGGGTCCTGGAGGAGGGATTTGGGAGCACTTGATGGCTCAGGGCAGTTGTTCCAGGAGTATTTTGCACTTTACCATCACGTCCTAGCCTACTTCCCCATTCACCTCCCACTGCTCCCCTGACCCCTTGTATTGCTCCAGTCAAACGGATGGATTCACTAACCTTTGCACCTGCTTCTGTTGGAGTTGCCTCCCTCTGTACTTTTACTTTTCTTGCTTCTGCTCAACCACAATGCTCTTCCCACCCCGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCATGTCCAGTTAAGCTTATGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTCCCACCCCGCTAGTACTCATCAAATTATACCCATCCTTCAAGGCTCAGTTCATAGACACTGCCTCCCCAGACCAGCCTACCCTTAAGTGAGTTCATTCGAAATATGTTGCAAGTGCCATTCTTTGGTAACTGACTGTGAGCAGCCTGTGACATCGCCTCTATAATAATGACAAACTGTTACTTAAATCTTCAATGGCCTGGACTTATGTAGTCTCCCCAGTTAGTGTGTTACCTTCTGAGGGGAGTGGGACTGTCGCCCGTAGCAGGGCACACTACGAAGCATCTAGTGAGCGTCAACGGACGGTTACTGATTGAGCTGGGGAGAGAGGGGGACCAAAGTGAGGTAGGTGACCTCCGACCTCCCCTCTGCACAGACACTCACCCCGGGTGCTCCACTGCCCAGGGCCGGCCCTCCCTGGCTCAGTGCCCTCATGGTACCCCCACCCCACCCCTGGCCTTAGCACCCAAGAGTTGTTACTACTTTGAACATCCCCTGCCTCTCAAGAAACTTCCCTGTCCAGTTTCTTTCCTATTCAAAGTGTTAAATTAGCTAAGCTGATAAACTAACCTGTGCTGATGTAGTTATGGGAGAGGGCTAGAGGAGAGCCTCAGGAGAAAGGTTCATTTCAACCAGGGTCGTGGAGCAACAGCACCCCTGCCTTTGCAATAGTCTGATGGAGTCAAGAGACTGGCTCCTCACCCCCAACAGCTGATGCATTACTCCCTCCTCTGAGCTCCCACAGCACTTTGTATATACCTCTTATTGTAGCACTTAGCACATGGTAGCGCCTTAGCTATGTGTTTATGTATGTTTCCCCTCCAATAGACTGTGAGCTCCTCAAGGACAGGGACTGTGTGTTAGTCACTGATGTATCCCCAGCGCCTAGCACAGTGCCTGGCACACAGTAGGTGCTCAATAAATGTTTATTAAAAGAATGAATGGGTCCTGTTTCTAATCATGAGATTCCAGTGCTATACTAAGGCAGGCCAGAGAGGCCGGGAAAGGACACCCACACGGGGCCTCCCACGGCTTTCGACCCCTCATAGAGCATGGCAGGCAGCTGCCTCCCTTGCCCATGTCTGCGGCCACCCCAGGACAACAGGAGCCCAAGGCTGCTTCCAGCAGTGCCTTGCTGTCACTAGGTGCCCGGGGCGGCTCTGAACTGCCCTTCGCTGCTGCCTTCTTCCTGGGACAGACTCATCGCTATTTCCTCATACCTGGGTGGAAATGTCACTTGAGTGGTGGAAATGTCAGCCC EMBV3_17468 ACAGATCCAGGGCCTTACCCCTCTGGCCATTTCTGTCATCCCTGCTCCTAAATTTGCTGT Gene GeneID:528436|STRC:XM_002696749:380_cdna Constitutive 0 NULL GeneID:528436 21 GENE STRC NULL stereocilin EMBV3_15114 CTAAAGAAAGGCTGGAAGACACAACCCCAGTGTAAGTGGACAGGAAGCTTGAAAGGCCTG Gene BVT0101_018084 + 0 NULL GK000011.2:23004547-23659701 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43016 CAGCCCTGACAGTGGTGGCCGTAGGCACGCCCCCTGGTGTTTCTGCTTTGGGCAGGAGCC Variant GeneID:513152|RHOC:NM_001046138:98_cdna 799^995 4 EMBV3_30155 GeneID:513152 3 GENE RHOC MGC140228 ras homolog gene family, member C EMBV3_42601 GTTTCGAATCTGGGCAGAACGGTTTCATCCCTGCCAACGAAGTGAGCTTACCACCAGTAG Gene GeneID:539687|PARD6B:NM_001098104:1237_cdna Constitutive 1 NULL GeneID:539687 13 GENE PARD6B MGC149024 par-6 partitioning defective 6 homolog beta (C. elegans) EMBV3_00685 GGCACAATGGAGGACAAACGTAACATCCAGATCATCCTGACCTTCCGACAGCTGATGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05099 TGATTTGATCTCCAGTGGGGTGGATTCAGTGAGCCCCAAGAAGCGGGTCTGAGTTTTCAA Gene BVT0102_072312 + 0 NULL GK000022.2:37675106-37731239 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128524 TCONS_00128527 TCONS_00128528 1 XLOC_077906 Coding TCONS_00128524 XLOC_077906 Coding Coding ATXN7 22:37582833-37717296 j TSS95855 10084 1 TCONS_00128524_3 929 0.0138833796112654 14 0.925108952715265 0.00081846005584772 0.00109231196546984 3.81118572692171e-05 2.03425977761206e-05 5.52147382944489e-14 3.62472096972135e-11 0.000101443341210192 0.000225969655852695 0.000348675362278622 2.11579327573788e-08 6.60376122623377e-05 3.30628984580231e-11 6.5767467444399e-13 2.90711035044606e-08 6.95521234663e-05 0.000331139970059294 3.39629987394718e-08 1.03833814685478e-06 0.000166449299585758 0.000503202422709995 0.000321082955801774 8.86464307064927e-06 2.63712864826264e-11 1.01569746328028e-07 0.00141242306116777 0.000434545257983874 0.000195984084310761 0.000121554652344974 8.9985260973821e-06 6.449459878247e-05 XM_002696986.3 ATXN7 PREDICTED: Bos taurus ataxin 7 (ATXN7), transcript variant X1, 0.0 4522 99.88 0.249305831019437 XM_005265366.1 ATXN7 PREDICTED: Homo sapiens ataxin 7 (ATXN7), transcript variant X2, 0.0 3909 80.98 0.407378024593415 TCONS_00128524_3 sp|O15265|ATX7_HUMAN ATX7_HUMAN Ataxin-7; 0.0 1299 88.12 0.947255113024758 1 coding 0 0 0 0 0.0266342243041733 0.852446591488883 -0.0209883704968627 0.679839577304813 GTGATGGGCGAGAGGAAACGGGCAGCAGTCCGGCTGATTTGATCTCCAGTGGGGTGGATTCAGTGAGCCCCAAGAAGCGGGTCTGAGTTTTCAATCCAGGTCTGAACAAAATTAAGAAGAAAGAGCTGCTACAATCACAGCAGATGAAGATCTACTAGTAAATTGATCAAGATTTTTGGCCAGCCCTCCAAAGAAAAGGAGCGGAAAGAATGTCGGAGCGGGCCGCGGATGACGTCAGGGGGGAGCCGCGCCGAGCGGCGGCGGCGGCGGGCGGAGCAGCGGCCGCGGCCGCCCGGCAGCAGCAGCAGCAGCCTCCGCAGCCCCAGCGGCAGCCGCCGCCGCCGCGGCGCCTACGGCCGGAGGACGGTGGCCCTGGCGCCGCCTCCACCTCGGCCGCCGCCGCAATGGCGACCGTCGGGGAACGCCGGCCCCTGCCGAGTCCCGAAGCGATGCTGGGACAGTCGTGGAATCTGTGGGTCGAAGCTTCCAAACTTCCTGGGAAGGACGGGACGGAATTGGACGAAAGTTTCAAGGAGTTTGGGAAAAACCGCGAAGTCATGGGGCTCTGTCATGAGGACATGCCAATATTTGGTCTCTGTCCAGCCCACGATGATTTCTACTTGGTGGTGTGTAACGACTGTAATCAGGTTGTCAAACCACAGGCATTTCAATCACATTACGAAAGAAGACATAGCTCATCCAGCAAGCCTTCTTTGGCCGTTCCTCCCACTTCAGTGTTTTCCTTCTTCCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGGAAGTGGAAGCAGCCGTTCTTCCAGCGGAGGTGTCCTGAGCACATCCTCGTTAAGTTCCAAGTTGTTGAAATCGCCCAAAGAGAAACTGCAGCTCAGGGGGAACAGGCCAATGCATCCCATTCAGCAAAATAGAGTCCCCCATGGTAGAATCATGACACCCTCTATCAAAGTGGAAAAGATTCATCCGAAGATGGATGGCACACTACTGAAATCCGCGGTGGGGCCCACCTGTCCTGCTCCTGTGAGCTCCTCAGTCAAGCCTGGCCTTAACTGCCCCTCAATACCAAAGCCAACCTTGCCTTCACCTGGACACATTCTGAATGGCAAAGGGCTTCCTGCACCGCCTGTTCTGGAAAAGAAGTCAGAAGATTACTCCAATAACAGGAAGTTTTTAAATAAGAGATTATCAGAAAGAGAGTTTGATCCTGACATCCACTGTGGGGTCATCGACCTCGACACCAAGAAGCCCTGCACCCGGTCTTTGACATGCAAGACACATTCCTTAACCCAGCGGAGGGCTGTCCAGGGTAGAAGAAAACGATTCGACGTGTTGTTAGCCGAGCACAAAAACAAAACCAGGGAAAAGGAATCGATTCGCCATCCGGACTCTCAGCAACCAGCGCAGCCTCTCAGGGACCCACATCCCACCCCTCCTAGAACGTCACAGGAGCCACACCAAAACTCTCACGGAGTGATTCCCTCCGAATCAAAGCCTTTCATAGCTAGTAAACCTAAACCTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGCCCTGCTCAGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAGTCTATGAGTCTCCACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTCGGTTATCCAGTGAGGAGGGAGAAGGCGATGACAAAGAAGAGTCTGTTGAAAAACTGGACTGTCATTATTCAGGTCATCATCCTCAGCCAGCATCTTTTTGCACATTTGGGAGCCGGCAGATTGGAAGAGGCTATTACGTGTTTGACTCCAGGTGGAACCGGCTTCGCTGCGCCCTCAACCTCATGGTGGAGAAGCATCTGAACGCGCAGCTGTGGAAGAAGATCCCGCCCGTTCCCAGTACCACATCGCCTGTGTCCACACGTGTTCCTCACCGGACAAACTCTGTGCCGACGTCACACTGTGGGGTTAGCTACCTGGCAGCAGCCACCGTGTCACCTTCCCCTGTCCCGCTCTCGTCCACCTGCGTCTCCCCCAGCAGTAAGTTGGTCCCAGCTCACGGAACCACACTGAACGCCCAGCCCGCCGCCTCCGGGGCTGTGGACCCTGTGAGCAGTATGCAGTCCAGACAAGTGTCTTCTTCCTCCTCCTCCCCCTCCACGCCCTCCGGCCTGTCCTCCGTGCCCTCCTCCCCCATGGCCCGGAAACCTCAGAAGCTGAAATCCAGCAAGTCTTTGCGGCCCAAGGATTCTTCTGGTAACAGCACGAACTGTCACAACGCCAGTAGCAGTGCCGGCGGCGGCTCAGGAAAGAAACGCAAAAACAGCTCCCCACTGTTAGTTCCCTCGTCCTCCTCCTCATCATCCTCGTCCTCTTCTTCTCATTCCATGGAGTCTTTTAGGAAAAACTGTGTGGCTCACTCTGGACCTCCCCACCCCTCAGCAGTAGCTTCTGCCCCGGGCATCAGCCTCAATTGCGTGGCCAGCCGAGCGAACTCGGTGGGTGGCCGGCACGAGCAGCCGGGGTGCCGGGGCACCTCCAGCGGGAACCCCTGCGAGTCCATCAAGAGGATGAGCGTGATGGTCAACAGCGGCGATTCCACACTCTCCCTTGGCCCCTTCGTGCACCAGGCCGGCGGCGAGCTACCCGTCAACTCCCACGGCGCCTACCCGCACTCACACACTCCTCTGGACAAACTCCTAGGAAAGAAAAGAAAGTGCTCACCCGGCTCGAGTGGTGTCAACAGCAGCGGCGGCAGCAGCAAGCCCACCAAGGTGGCCAAACTGCCGGCCGTGAACAACGTCCACGCGAAACACGTGGGCCCCAGCCCGGGGGCACCGGGGCTGACGAACAGCTCCCTCCTCCATCAGATGCTCCTGGCTAAGGAGGCCACACCAAGCGCATTTCAGCAGCTGGGGCGGTGGACACCGTCCTGCATGACGGTGGGGCCCTCCGTGTCCTGGAGCGCAGTCCTTTCGTACGTTTTTCTGAAGAAAGCTGGGCGAAAATCAAGCTGATGTAGAAAGGGATGATTTAAAGTTGAAAAAGGCTGTTAATATTTTTCCCATCAAAGAGTTTCAGATTTTCATGTTAATTCCCTCCCTCTGTGTTTTCCTTCCTGTTTTCCAAGGAGGCAGGGAAGCAGAATTTAACTATGGCAGAGCAGAAGACTAATATCTCATTGAAGTTAACAGATTGAAAAGAAACCTGAATGTGACCTGTTTCTAGAAAAGGGCTTGTCGGGCATCGGATTTGTTACTGACCGTGGTTTCTCTGGCTGTGTCTTGTCTCCTCCCCACTCCTCCTCCGGCTGCTGTTTGCTCCTGTGGCCAGTTCCTCCACCTTCCTCTTTGTTCTGTCCAGCTCCTCTCTCATCTTGTCATTTCATTCAGCAGAGCACTTTCTGTCTTTGCTTACAAGCAGGAATTTCAGCAGTGTCACCCTCAGAGCTCTGCTTTAAAATGTGAGGCTCTTTTTGTTTTGTTTGGTTTTGTTTTCCCTTCCTCATCTTCAAAACTGAACATAAATGTCAGACTAGAACTTGTCCAGAAAATACCAAGAAGTTTCTTCATGAGACAGAAGTTTCCCTCCAGTATATGTGTGAATGAAAACTCGGCGCCAAAGGTGTGGGGAAAATAATGACGCATAAATTTCAGTAGCAGCTGCTTCAGTTCTTCTCTTTGAGCCACAAATACATACGGGCTATTTGTGTGTCATTTGGGCCTTTGAACAGGATTCCTGGACAAGTGAAAACTTCTTGATTTATAGTTTAATGATAAGCATAAAAATGCACTGCAAACCCTGTAAGAATCCATCCCTTAGTAATACCCTTCTGAGCATAGTTTCCCGATTCATGTGAATCCCGGGAGGGAAGTCCCACTGCACGCACCCCTGTCACGGAGCGGGCCGTCTTCACACAGAAGCCGCTGCAGACCAGACCGCCCCCGGTGTCGGGGCAAGGTGGAGTACTGGCGAGTGGGCGCCTCGTCTGCACAGAGCGGCGACTCCCAGAAACTTGCTCTAATTTCAGAGAGAAACTGCGCATCTGAACCTTCATGAGAAATTTAACCATTTTCCAAAGCTCTGTAGTTTTTTTTTCATTTTGTCTTGATCTGGTGAAGCCCACACATCTCTCAGCTAAGTTTGGCTCAGGAGCTACCCATTTGCCACCTCTCATTTCCACCATCTGAGGAGGACTACGTCCCCCTTGGACAAACAGCCCATGTTTAGGTTCTTTTCCTTAAAAGCAGTTTCACATCATGTTTGTATTTGAGAAAGGTTTTCTCTGTGCAGTGCAATAGTTTCTGTTACGCTACACAAACTCGGTGGGCGGGGGGTGTGGGGCATGGCTACAGACCACAGGATGGACGAACTGCCCAAAAAAGTATTGCATATTTTTACATCCCTGATCATTTAGCTGCAAGAGGCAACCAGTAGCTTTCTTCAGACTATCAAAGGGACCCATGCCTCCAAAATGCTGTACAGAAGTCTGCTCTTAGACCACTAGGGGCCTGACCTCGCTCTTCTCCATGGAGCAGATTTTAGAGCCGAGATAACTGGGCTGGTTTGAGTCCCTTCAACAGCAGAATCGGGGACCTGCTGGGGAGCCTGGGAGATATTGCTGAGTGCCCGCCCAGCCCCTGAGTCAACTTGTGGGCTTTGCCACCAAGGACCTAAAAATAGCTCACTGCAGGCCAGCGAAGGCCAGAGTTCCCTCTCCCTGCCTCCCCTCCGCCTTGGGTGTGAGCTTTCACACCTGTGTGCTCGCCCATTTGACCTTGTTCAATTCTCAGTTGACAACCTGGAAAAGCCTCAAGGAAGCAGCATCCGTAAATAGAACCAAAAGGCAAACATGTGAGCCTTTTCTCTAAGCTAGAAACCCAGGCTGCATCTCTTCTGGACTGTTTTCTGAGAGCCAGTCTCTTAGAAGGGTTGTGCCCAAGGTCGTTGGAGACTGTTGAAAGCTAAAACCAAGTTCTCTAGCTGCCTGCTCCTGGCACGGCCCGGGCAGAGGAGACATGAGCGGTGCGTGGCCTTGGGAGTACCTTTTTAGAATCAGGGCAGGGCTGGGGACAGCCGCTTACTTACCTTTCGATGTCTCCCCACCCCCCTCTTTTTTGAAAGCCAAAGGCCCATCCCTGACAGCTGGAAATAGCATGGGGAGGAATAATGTGGACACTTTGGACGACAAGTTACACCTCCACTCAGCACTCTGGATTCCACGACACCTTTGAGTCTGTTTTCCCAGCCTCCTGTGGGCCTCGAGGGTAGAAATCTGCCGGGCCGTTGTTTTAATGAGGATGCCCCTGAAGCTTTGTCTGTAGCAGTGAGTACTCGTTACAGGACACTGGATCAAGTCCAGCCACCAGGTTGCTTTTATCAGTGTTAGAGGTCTGGACGGCTTGCTGCCACCTGTGAGAAGTTCCTGTCTCGTTGTTGCACCTGCAGTGTATCACCGAGCCGCTCTTGGAGGAGGCTGGCTGGCGCCAGTGTCTCGGCAAGAGTGTGACTGTAGTCTTTGCTCCCTCTCTCCCTCCCTCACTCTCCCTGCCTAGGTCTTCCCTCACCCTGGCATCTGTAGGCCCCAGGTCCCTCTCCAGCAGTCAGATACCGTAACTGGAGAGACCTCTGGGGGCAAGCAGAGCTGCACCCCGAGCAGCCCTCTGGAGAAGGGAGTCTGTGGCTAGGTGTTTACATCTGGAGTCCGGAATGGAGTGTGGACGTTAGTGTGAGGCGCCGTGATAAAAGAGCCTGTGTTTTCGCCCAGCCTTTTGCAAGTAATTCGGGATCAGAAGCCGTCAGAAGTTTTTCATGTGTGAACTGGTTTAAAAGCCATTGATGGCCAGAGAGCAAGGATACACCAGTGTAGAGGCTTACTTTTCATGGTACAAAAGCAATTCTGTGTGAATTTAAAAAAAGAAAAGAAAATGCAGACAATTTTGATATGGAAAGCCAAATTTTGATGGGAGGGGGCAGATAAAAATCACTGTGGGGGAAAATTTTCCACGATTTCCAAAGAGATTGATTTTTTTTTAACCTTTGTTTTCATGTTAAACAATATGATTAGGCCAGTTGTCCCGCCCAGGCTCCTGTTTTTAAAAATTGCCTTTGTAACATGAAATAACTGGGATGCAGCAGAATCTGTCACTCACCAAGTCACTGGAATACTTAGATGTTTCCGAGGCGCTCTGTGTGTTCCCCTCAACCTCTTTGGATCCTGTCCTGGGACTAAGTGTCAATTTCTGTTTGGAGCACTCCCGGTGTTGTGCGTATCTACACCCCGTATCCTGCCGCTGCACACGTTTCTGGGGATGCCATTGAGGTGGGCAGCAGGCACCCAGGGCGGGGCGCAGGTGACGGCACCCATGTGGAGGTGGTGGGGTGCTCCGTGACATACCTCCTTTCTTGGGATTAATGCCTGTGATGTTCCTGAGGGTTTCAGAGACCACCCACCCACCCCCCACCCACCCAGAAGGTTTTTTCTAGTACGCCCCAGAGAAAGAGTTTGATAGGTTAAGGCATCTCTGCCTGAGAAGGTGCCATTGAATTTGAGGGGATGAGCTGGAGCTTTTCAATAGTTGATTCCACCGGCACCTCCTGAAAGGAGAACCAGGCATTTCACTTAGAGGAACACAGGAAGTTGCCAACCACAGGGTAAATTTCCCAAGGCTCCAATCATGGCCCCGGGTAGAGCCAGGACAGAGCCAGTCAGTGCATCTATTTTCCTTACAATTCTTGGGTTACAAACTTCAGATTCAGGGAATTTTCAGTCAACAACAGGTAGAATGAATAAATACTTGGTTACCAGCCTAATAATGTGAATCGCTACAGAATTATTATGTAAGATAACAAAGTTTATGGAGATACTTTAGCTATAAATTGATGTAAAATATTGATTCTTTTTTTTAAAGGAAGGGGAGAACAGTATCTTGTTTAGTTATTATGCAATCAATTAGTAAATGTTTTTAAAATGATACTGTAAGAGAGCTTGTAAGAAGAGTGCACAGATGGGCCCATTTGGTGTGGTTAGGAGAGGTTGGTCTGGTTTTTCATCCCAGGAGAGGGACAGAAGGAGGTAAGAGGAAGTCAGAACGTACCTAGCTGATTCCTCAGTGACAAGTGCAATGGGGGATGGGTAGAATTTATTTTCAGAGCCAAGGGGACTTGATGGTTATAAATAAAGTTGCTTTTAGTGATGGAATTGTAGACAGATCATGTTGTTCCAGAAGATGTGAATAGGACCCATGATAGAAAGTTGACTCAGAATAATGTAGATATTTAGATAAGCGAATCTTGATCCTTTGATTTCTTAGATTGAGGTTTTAATTTCATTATTGTCTCCCGGTAGTACACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGACTCTGCCTGCCACAAACAGACCTATTCTAAACAGTGCTATTAAATTTTAGACTGTTGTTCAAATATTTTTATTTTCTCCTACAACTACTTTTTATTATAATGAACAAGTAAGACCATTTAAAACACGGGAGTACAAGTATTTTTTTGAACTGAATTAACTTGCAGAAACCAAATTTGCAGTGGTTGGGTTGTTTCTAGACAGACTTTGGTATCAATTTAAAACCAAGATAACTTTTATATTCTTTCCAATAGAATTCCGTGACAACTCCTGCAGTTTTCTTAACTTACAAAAAAAGAAAAAGTGCTGCAATGATGAACAAAGAATTATACGAAACCTACTTTTGTATCTTTATTTTGGAATTTCTTGTTCTATTATAAATATGGAAGTATCCCTATTTGAGAAGACATATTTTGTTAAAAATGAATTGTACATATTTAAATATGTATTTTTGCACAGGTCTTTTTTTCTGATATCCTGTTTTGGTACAGTTGAGATCATCTAGTATTTATTTATTAATTAATAAAAGTAAATACCTTTTTATAATTTGAAGTGGCTCACTGCCAAGCCAGTAGTTCTAGGACCTGCCTCCTTTACCATGTAAGGGACGCCTCTGTTCTGTGAAAGTCTTCTGTCCCTTTCAGTGTCTCGGGAGTGGATTCGTGCAGATGAAGTGGGCATTGCTTCTCCCTAGTTGCTTGATTTCCCTGTAGACTACATGTAACAAGTGACACACTGCTTTTCTTTTGTTATGTGTGAGAGTGAGTGTGTGTGTGTGTGCGCCCCGAGCACACGGGTGTTAGTATGTGACGCGATTAAAACTAATGGGAAAAACACAAAACTGAAAGTGCCTGAACCTAGTTTTAAGCTTAGACAGATTCTTTAAAAAGACTTGAATGTTCAGTTGAACTTTTTTGGAGTTTGCTTTTTCCACCTAAATATTGTTACTTAAATTTTAGGGGAGGAGTTGAAAACCACCAAATGCTGGTAATTTTATAAGGTATTTTAAAATCAAGACCTTTTGGTTCACAGGAATTCAACTGGCAATGAATTGCCCAGTGGCACCAAGGGTTACAAATCTTCTGTCAGCCAGCAGCTTAACAGCGTGTCCGTTTTGTTATTCACTCGTGAAATGCAGAGTTTAAAATAGAATATTTAAAATATTTTGTATTCCAAAAAATATAATACAGAGTACCTCTGAGAACATTGAAAAAAAATGTATAATTTGAAAAAATGTAACTTATAAAGGCAGCTGTCTTCCTGCAAGAGTTCTGTTGCCAAGGAATTTCTTAATGTCTCTCATTCTGTCCTGCGGTGGGGGGGATAGTTGGGCTTTGGAAAAATGATTGTTAAAAGTTTCATTATGTTTAGCAGAAAAATAATCATTTTTACATTTTGTGTAAAACCTTTTACATTTTCAGATCATTTAAATGAGCACTACATACTGTCAGTGTGAGTGTAGGGCCTTGAAAGCATTTTGCCGGTTTCTTTCTTTTTTTTTTTCTTCCCTTTGAGCTTGGTTATAAAAGCAATCTCCTGTTTAAAATGTGTGAATAGTTTGATCATTTGTACACATAATCAAGAGCATCTCAGCTGGACTTTTTGTTGGCTGCTGTATAGAACATGAACAAATGCAAGGGATAGAGGATTACTTTGGATATTTAAAAGAGAAGAAGAAATATATAGTCTATTTGTTTTGTAACAAGTTCTGTAAATAAAATAATTTATACTATTTATAAGAAAAGTTGTGCTTTGCTTTATGAGAAATTAGTTTGTGGAACAAACATGTTAACGGGCAATAAAACTAGGATTTCTCAATAAATAAGGTTGGCTGCATGAAATATTTTACATGTTTCTGCCTCGTTGTGATCCTGAACCTCTCCCGATCTAGTCTGACTCTTCATTTTTAACATCAGACACCCTTGTAAAGCCCCTTCCTTCAGCTTCCCTTCTGTGCAAGCTACAAACTTTAAGGGCTTAAGATGTTTCCCTTCTTGGGCACAGAACTTCACCGTGGGTAAATTAATAACTGGCTAAACAGTGAGCACCACTGTATTCGCGCCCTGTAGGTTTGTCAGCAGAAGGAAATCGATAGGGTGAGAAATGCATTCTGTTTGTATTATTTGATGGCATGTGGTCAGTTTTGATTGCAGGTAAGTCTGTGTGTGGGGGGGGTATTTAATCTTTATTTTACATTGGAGTATAGTTGATTAACAATGTTGTGTTTGTTTCAGGTGTACAGCAAAGAGGTTCAGTTACATGTATACAGGTATCCTTTTTCAAATTCTTTTCCCATTTAGGTTGTTACAGAATATTGAGAGAGGTAAGTTTTTATCCCAAGTGGGTCTGGTTTCTTTCTTTCTTTTTTTTTTTACATACCTCCCTCTCTGGCAATACAAGTATATTAGTATTAGGCACAGCATAATCTTTCATCTCAAGAAATTTGGCCATTTTTACCATTTGCAAACCATTCTTACAAATTCCAAATTATTTTTGTTGCTTAAAAGACTAAGGGAAGCAGTGGATCTGTGGACTGGAATAAAGGTGAGTAATTACAGGAAGGGGTCAGGCTGGCTTCAGTCCCCACTGCCCTGCTCCATGGACTTACATTCCATCCTTAGATCAGCTGACTGTTCAGACTCATTCTTAATAAATTCCCTATAGGTAACTCCTTTCACTTTGGATGTGCCCCTGAACGTCCCAGGAGAAGGTTCACT EMBV3_42664 GATAATCTGAAAAGCAAGCTGGATAAAATGGATCCATCTCTGGATGACAATCTGAACTGC Variant GeneID:767932|AZI2:NM_001077005:241_cdna 740^988 2 EMBV3_11248 GeneID:767932 22 GENE AZI2 MGC127476 5-azacytidine induced 2 EMBV3_20186 TTCACGGATCTGCGGCAACCACAAGAAGCCCGGTATCTACACGCGCTTGGCGAGCTACGT Gene GeneID:505647|CFD:NM_001034255:29_cdna Constitutive 0 NULL GeneID:505647 7 GENE CFD DF MGC127587 complement factor D (adipsin) EMBV3_12608 CCAAATATCATCTCACCCGACACCTAAAAACCTGCAAAGGGCCCACCTCCAGTTCATCAG Gene GeneID:540731|PRDM4:XM_002687670:46_cdna Constitutive 0 NULL GeneID:540731 5 GENE PRDM4 NULL PR domain containing 4 EMBV3_14891 TGCTGAGGAGTTGGTACCTGGTTCTTCAGGGTGAATCTCCATCTTCACTTCTGGTGATGC Gene BVV0102_096070 + 0 NULL GK000019.2:44368599-44387967 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094019 TCONS_00097185 2 XLOC_057331 XLOC_058191 Coding TCONS_00094019 XLOC_057331 NonCoding NonCoding MPP2 19:44385202-44388022 x TSS70412 2820 2 TCONS_00094019_12 135 0.125886524822695 1 0 0.00239320777980034 0.00125802547314705 0.000532073073731578 0.000888182321495269 0.000271368658259099 0.000318382612630982 0.000222428924953715 0.000132963340667 0.000870151947797684 0 1.62352372129263e-06 2.53495814266705e-06 0.000184162986653064 0.000220187206935631 3.13154209970829e-05 0.00171393465260931 0.000111859390304775 0.000231329825726488 0.00142390450069444 0.000869599573953472 0.000170086506824358 7.63117505743422e-05 0.00040339763921295 0.000433973784336341 0.00206624917737474 0.000377255624174374 0.000644088812595442 0.000347421467123714 1.37719149658275e-05 0.000110862324322247 XM_005220838.1 MPP2 PREDICTED: Bos taurus membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) (MPP2), transcript variant X1, mRNA. 0.0 3703 100.00 0.727659574468085 NM_005374.4 MPP2 Homo sapiens membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) (MPP2), transcript variant 3, mRNA. 0.0 812 68.21 0.726950354609929 0 noncoding 1 1 1 1 0.00706739040110535 0.950041983472092 0.00783284310804565 0.908741066751907 GGAGGACCCAAGGAGGAAAAGTTGGCTAAGAAAACACTCCCTGAGCTGGGAATGGTCAAGGGACATTTTGGAATTGGAGTGTTTACTATTCGGTTCTCAATTCTCGTCAGAGCTGTTAGGCGGGTGAAATGAGGCCCCATGGCTGCCTCCAAATCACCAGTCAAGCTGTCCCCACACTAGTCCCTGTGTGAGTGGATGCTTTGGAGAAATCAAAGGAAGGGAGCCAGTTCAACATTTGGTTATCATAGAAGGGAACAGCCAAAGCCCTTCTTGAGAATGTTCAGTGAGCATCCTGGGATCCCCTGAGGAACTCAGGTGGGAAGGAAGCTGACCCCTCAACCACACACCCATGGAGACATTGGGGTGATATTTCAACCACTCTCTATGGCCCCTGCTGCTGAGCACCTAGAACCAATCCTAGCATTACCCCGGGAGAAGCCATGACACCTTACAGAGGATGAACCTGAGGTCCAGAGAAGGAGAAGAACCTGCCTAAGACCACACAGCAAGTTCTGGGTAAAGTTGAGTGGATTAGCTATGGGTTCCCTGAGTTCCCTGGCCCTCATGGATGCTCATAGACTCCTGGATACAAGCCTTTAACAAGAGCATCTTCTGGGGCTGGGGAGTGTGGAACAGTGGGACATCACAGAACACAAGACATGTCACTCCAGCTTCCATTCCAGAATCATCTATGCTGCGCTGCCCCCACTCTAAACCTTTCCCGAAGCCATCCACTCGATCCCAACAAAAGACAAACGGAGCCTAGAACCTTTGCTTTCACATTTAATCAAAGGAAAGAAAACCAGTCAGAGAGAAAGCTTGGGGATTAGATGGCTGAGGGATGGGACGGGGGAAGGACAGCTGGGCTGGGACTGGGTGTGGACAGGGTCCTCATTATCCCGAGGTTCCTCAATACAAGCGTCCACAGTGGGAGGGGGGGAGGATGAGCACACACACCTGTTCCAACCCAGCCCTGGTCCCTTGAGCAGGGCTGAGGTAGGGGAGGAAGGAAGCTGTTCAGAGAGGGATGGAGACAGGAAAGGAGGGGCCCAGCCCTGACCCTCAGGCATCACCAGAAGTGAAGATGGAGATTCACCCTGAAGAACCAGGTACCAACTCCTCAGCATGATGTCCAGCGCCCATTCCCATCCAAGAGGATGGTCTTCTAATCAGGGAGCTCTGGAGCATTACCAAAGGGAAGGGGGTGGCTGCCTCTATTCCCAAGTCTTCTGGGTGAGGTGGGGATGGATGGACAAAGGGCGCCATGGCCCCGGGCCAGCAGGAGAACACCCATTTTCCTCCCACTCCCAGTCTCCTTGGGCTAAGGGTGAGGGGGAAGCAAGGGAGAGCTGAATGAAGGATAAATTAAAAGAACGCTGACTAAAGGGAAAAGAGGAAAGCAGAGGTGCATAGTGGATGCAGAGCTATGCAAATGAGATGGGAGCAGGCTTGACCGTCACATCTCACTTGTATACCTAGGCAAATGCAAATGAGATCCCTAATATAATAAATATATTTCTAACTTTGTAATAAATATTCTGTTTCTTCTCCCTCCCCTTCCCTAAGAAATGGGCACACAGTGGTTCAGGGGCCAGCTTGGGCTGACACTGCAGCGAAGACGGACTAGACACTCGGAAGAACCGGGGAGCACAAAGGCTGGGGCTAGGGGTAGTGGGGGAGGTCCCCTACAAGGACAGGCTCACCCCCAGGAAAGGTCACAGAGAAGGATGAGGGATGAGATGCGGGGGGAAGTCGAGGACAGCATTCTTTTCTTAAAAGGGATTCTCCTATTTTACACAGTCGCCCTCCCTGAGGACTGGAGGGCAGGCATTTAGGATCAGGAGACAATAGGAGAGTTGGAGGAAGATATCTGGGGAGGGCCAAGCCTCTGGAATCTGGGATAAGGGTCTCCTAAGAAATGGGAGCTGATGGTGAGCCCCAAAAAGGGGGGCCCCCAGAGAGTAACCTCCAAAGCAAAACTACCTTTTGCTTCTCCCTCTCCCAAAACGAAGCCTGACACACACATCAGTGGCAGAAACAGACCAGGCACCGCTGCAAGGCGAAACAGAAACTGAGCCGACTACAAGGTGAATGGCGCCCCCTGGAGTCATGCAGGGAGCCTGCTGGGGCACAAATGTGCTCCGAGCCCACACCTCATGGCCCGGCCCTCACCCTGCCTCAGCCCTCAGGCAGCCCTCATGCCACCTGGACCCGCCAGAGACACCAAAATGGACAACAACTACAGAGAGGGAGCTCAGACATACCCCTGCCACGGGCCACGGAGGGCCGGGAGTTCTCCCGTCAGAAGTTGCAGGCTCCTCTCCTCACGGGGTTTGGCCTCCAACCCACCCCAGCCTGGGCTGAGCCCACGGCCCCTGCCAGCCTTGCCCTGCAGGGAGCAAGATCTGCCCTGTCAGGGTCACCTTGGAGAAGTCTGTGGAGAGACTTCGGCAGTGAAAAGCTGTGGATGAGGGAAGGACAGGGACCCAGCCCCGTTCCGAAGGGGCTGAGAGCTGCACGGGTCCCTGGCTGTGGCAACTAGCTGGTGCTTTGGCTCCTTCAACCTTTGGGATGGCACCAGGCTGACACCCCCACCCGGGCCTGCCTGGTTGCCAGGGAGTCATGTACCCACCCTGGTCACAGGGAACCAGCCTAAGGCCGGCTCCTAGGCTGCAGAGGTGAGAAGTAGGAGGAGCCTAGGAATGGGGAGGTGGTGGGGCCAGTCCAGAGGAGGAAAAGTGATTGGAGAGGGGACTGGTGGGAGGGGGGCGGGCAGTGTACCTATGACCACGTGGTCCCAAAGCAGCTTTTCTCTCCTCT TCONS_00097186 r 5' 0 TCONS_00097186 r 5' 0 EMBV3_38050 CCCGTTGTGACTTCTCACTGCTCCAGAGTTCTCCTTGGCTTTGTCACACAGGGAGATTTT Gene GeneID:511306|POP1:XM_002692795:87_cdna Constitutive 0 NULL GeneID:511306 14 GENE POP1 NULL processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) EMBV3_42193 ATGCCTATGGATATTATAGCGTCATTCCAGCCAGCAGCGTACCTGTCAACTAGGGAAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33654 TTAAAAACTGTCCTCCTTGATGGCTTTCTCAGTCACCCCCACCCTGCTGCCCTCAGCCTT Gene GeneID:282530|BoLA-DRB3:NM_001012680:2_cdna Constitutive 0 NULL GeneID:282530 23 GENE BoLA-DRB3 BLA-DRB3 Bota-DRB01 Bota-DRB02 Bota-DRB04 Bota-DRB07 Bota-DRB21 Bota-DRB22 LA-DRB MGC128256 major histocompatibility complex, class II, DRB3 EMBV3_01364 CGATGAACCCGGACCACAACGCTCTGTTGAAGACGTACAGGATATCTAAAGGGGTATACT Variant GeneID:518045|RBM8A:NM_001035324:71_cdna 268^376 1 EMBV3_30367 GeneID:518045 3 GENE RBM8A MGC127566 RNA binding motif protein 8A EMBV3_04307 GCGGCTCAACTTAAAAGAGAGAGAATATGCAGGCGTTTACGAGATGCTGAGAGGGAACTG Gene BVT0102_267773 + 0 NULL GK000024.2:25236064-25292746 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33470 CTCAGACCCAACTGGAGGACGGAAGCACCGACTATGGCATCTTTCAGATAAACAGCGACA Gene GeneID:512087|LYZL1:NM_001077910:31_cdna Constitutive 1 NULL GeneID:512087 13 GENE LYZL1 LYZL2 MGC148341 lysozyme-like 1 EMBV3_06067 GGTTCACATGTCTGTGTCATCCTCATCTTTTACACACCTGCTGCCTTTTCCATCCTCGCC Gene GeneID:788037|LOC788037:XM_002693204:393_cdna Constitutive 0 NULL GeneID:788037 15 GENE LOC788037 NULL similar to olfactory receptor Olr152 EMBV3_06594 TTCACTCATTTGGGTCTCCCATCTGGCCCTTTAGGAACTTGGGTTTGCCCCAGACTAGGA Gene GeneID:508790|TMEM120B:NM_001101908:102_cdna Constitutive 1 NULL GeneID:508790 17 GENE TMEM120B MGC148653 transmembrane protein 120B EMBV3_19477 GTTAGCACTGGGACATGGGTTTGATTCTTTGTTGTACTGAGGACAGTGCAGAGATTCTCC Gene GeneID:781665|IRF2BP2:XM_002698810:39_cdna UTR3_Alt 2 NULL GeneID:781665 28 GENE IRF2BP2 NULL interferon regulatory factor 2 binding protein 2 EMBV3_43298 GAGTTTGGTTGTGGTCGTTTCTCTGGTCTTTGCGTCCTTCCAAACACTGAGGTGACAGTC Gene BVV0102_236209 + 0 NULL GK000014.2:2875181-2883392 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21938 CTGTATGGCTGCCCTAATATTTCCAATAGGATTTTACATCAATGAAGTCGGAGGTCAACC Gene GeneID:100335574|LOC100335574:XM_002697989:66_cdna Constitutive 0 NULL GeneID:100335574 25 GENE LOC100335574 NULL hypothetical protein LOC100335574 EMBV3_21010 CTATGTAACACAGCCAAAGTAGTTCCAAGAGGGAAGTTGTTAGCAATGCAGGCCTGTCTC Gene BVV0102_357356 + 0 NULL GJ059322.1:1-60292 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00086 ATCGCAGGTGGCCCTGGAAAGAACTATCTGGCTCAACGTATCCTATGCTCCGAAGAACCT Gene GeneID:617909|LOC617909:XM_002683769:1_cdna Constitutive 0 NULL GeneID:617909 18 GENE LOC617909 NULL similar to Sialic acid-binding Ig-like lectin 14 precursor (Siglec-14) EMBV3_08282 TTAGACATTACGTTTATCACTGTGGATCAAATTGTCAGGTATTAAGTTATCGGATCTTTG Gene GeneID:508969|PRKRIR:XM_002693473:86_cdna Constitutive 1 NULL GeneID:508969 15 GENE PRKRIR NULL protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) EMBV3_35361 TGGCAAGTGCTTCAGCCTGGTGGAGTCCACCATCTGGCATGAGTGGGAGATCACCAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29723 GGAATGGGACTATTTCCTGCCACTTCAGTAAACAGACAATAGCTACTGCAGCCCTCCACG Gene BVT0102_251867 + 0 NULL GK000011.2:85233639-86050741 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033423 1 XLOC_019656 NonCoding TCONS_00033423 XLOC_019656 NonCoding NonCoding - 11:85289754-85290291 - TSS24422 537 1 TCONS_00033423_2 114 0.851024208566108 1 0 5.06729752542279e-05 0 0 0 0 0 0 0 0 1.14930174721261e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00013560363983755 0 XR_229125.1 LOC101906900 PREDICTED: Bos taurus uncharacterized LOC101906900 (LOC101906900), 3e-54 215 83.33 0.385474860335196 0 noncoding 0 0 0 0 -0.081491992731352 0.579346650668179 0.0232394899515523 0.61696720563737 CGTTAAACCTGAAGGAGAGAAGGCAGCAGGGAGGCATCAAGACAAACAAGTCTAACCTGAAAGCAGGTGAGGAATGGGACTATTTCCTGCCACTTCAGTAAACAGACAATAGCTACTGCAGCCCTCCACGAGGGAGTGGTGAGTCCTGAGGAGCTCAGGATGTGAAAACCGGACACTGGCCTCGGATAGCTGAGATGCGCATCAAAGGAACGATTTCAGTGAGCTCAGACTCTTGCATCTTTCCATACACAGGCTTCCCTTTTGGCTCAGATGGTAAAGAATCTGCCTGCAATGCAGGTGACCTAGGCTTGATCCCTGGGCCAGGAAGATTCCCTGGGGTGGCTATCCACTCAAGTATTCTTGCCTGGAGAATTGCATGGACAGAGGAGCCTGGCAGGCTACACAGTCCATGGGGTTGCAAACAGTTGGGCATGACTGGGCGACTAACACTTTCACTTTTTCACACACACAAAAAAAGTGCAAAATTCCTTAACTTGGGATATCTGGTTTTCTTTAATTTACAAAAAATCTACCTGC TCONS_00028634 TCONS_00028635 TCONS_00028636 . 5' 55571 TCONS_00028634 TCONS_00028635 TCONS_00028636 . 5' 55571 EMBV3_08685 AACTGCGCCTGTGCAACAACGGCCACACCGATTCACGTGGTTCACCTCAGCACTGCATTT Variant GeneID:511923|CA9:XM_002689698:152_cdna 655^797 2 EMBV3_32361 GeneID:511923 8 GENE CA9 NULL carbonic anhydrase IX EMBV3_35931 AGATCGTGCCTCAGCCGCCGAAGGAGTCAGGAGCTCAATATAACGACGCCCGCTGCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09234 CATGACATTTTTCCCAGAGCTTGTGCCGTTTTCTAAGCAGCTCCGTCCCAAATAGGTGGC Gene GeneID:507120|CIRBP:NM_001034278:35_cdna UTR3_Alt 3 NULL GeneID:507120 7 GENE CIRBP MGC127049 cold inducible RNA binding protein EMBV3_20526 ATGGCCTATGATCGGTACCTTGCCATCTGCCGCCCTCTTCACTATAAAGGTCTCATGACA Gene GeneID:100139830|LOC100139830:XM_002693734:471_cdna Constitutive 0 NULL GeneID:100139830 15 GENE LOC100139830 NULL similar to olfactory receptor 1105 EMBV3_10416 CTTGATGGTGTGAAAAAATGTTCTCACTGACCCCCACATTCTGAGGGAAGAATGGGTTTC Gene BVV0101_020104 + 0 NULL GK000016.2:22588281-23175454 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10086 GTCTCCAATCTCATGGAAGTTTTCCATGTCTGCTAAAACATAAAGGACCAGACACTCCAG Gene BVT0102_188834 + 0 NULL GK000019.2:32001645-32341961 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21782 GAGAAGAAAAACATTCTTGTACAACACCTCACTACCAAATGAGCATGGGCTGCATTTCAG Gene GeneID:281607|AGTR1:NM_174233:8_cdna Constitutive 1 NULL GeneID:281607 1 GENE AGTR1 NULL angiotensin II receptor, type 1 EMBV3_14645 GCAGGAGCAGGAGAGCTACGAAGATGTCAAGATGGATCAGGGAATTGTTGACGAAGAAGG Gene GeneID:506152|GNL3:XM_002697016:427_cdna Constitutive 1 NULL GeneID:506152 22 GENE GNL3 NULL guanine nucleotide binding protein-like 3 (nucleolar) EMBV3_23667 AAAAGGTCTTCGTCTCGGTCCAGCCCCAGTAGTCCAAAGAAGCAGAAGAAGGAAAACAGC Gene GeneID:539598|ZCCHC8:XM_002694484:337_cdna UTR3_Alt 3 NULL GeneID:539598 17 GENE ZCCHC8 NULL zinc finger, CCHC domain containing 8 EMBV3_17344 TCGAAGTGGTTCTGGAAGCTTTGGTGGCGGTCGTGGAGGTGGTTTTAGTGGGAATGACAA Gene GeneID:785761|HNRNPA1L2:XM_002685402:25_cdna Constitutive 0 NULL GeneID:785761 2 GENE HNRNPA1L2 NULL heterogeneous nuclear ribonucleoprotein A1-like 2 EMBV3_19379 GTCCCTCAATACGCCTGCGACTGTTAGCAAGACCGGACCAGTTGCAGGAGGCATTGCCTT Gene GeneID:618677|GDF15:XM_002688532:124_cdna Constitutive 0 NULL GeneID:618677 7 GENE GDF15 NULL growth differentiation factor 15 EMBV3_43280 CAGGCCCAGGAAATGCTCAACAATAACCTTGAATCCGAACGCCCAGGGCTTGTCCACCAA Gene GeneID:517263|AMBRA1:NM_001034522:69_cdna Constitutive 0 NULL GeneID:517263 15 GENE AMBRA1 MGC128737 autophagy/beclin-1 regulator 1 EMBV3_37144 AGGCGGAAACAGGCTCACGGATTGTGTCGGCTGCAGCAGTGATTCCAGCGAGCAGCTATT Gene GeneID:531968|RNF44:XM_002689003:35_cdna Constitutive 2 NULL GeneID:531968 7 GENE RNF44 NULL ring finger protein 44 EMBV3_05117 CATGTGTGTGCGCCCTGGATCCACACAGGCAGATGATCAAGATATGATGGATTCTCTATT Gene GeneID:783995|LOC783995:XM_002684692:2_cdna Constitutive 0 NULL GeneID:783995 1 GENE LOC783995 NULL similar to Olfactory receptor 5H2 EMBV3_29714 GCTCATTTGGAAAAAGAATCCATTGCTCAGGGCATTTGATGTAGAACTGCTTTACATAGC Variant GeneID:506566|ALG5:NM_001045943:47_cdna 562^713 3 EMBV3_31185 GeneID:506566 12 GENE ALG5 MGC137195 asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae) EMBV3_33156 AGTTTTTCTTTAACAACTACTTCCAAATCTTGACTACTAAAGGTAGTTATGCAAAAGTAG Gene GeneID:512704|REEP3:NM_001101961:13_cdna Constitutive 2 NULL GeneID:512704 28 GENE REEP3 MGC165949 receptor accessory protein 3 EMBV3_27765 AAAAGCCATACCGAGGACAGGGTAGATGGGAAGGCAGAAAGGATTGGTGAGCAGTGTGGA Gene BVV0101_066853 + 0 NULL GK000003.2:89869020-89962173 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173987 1 XLOC_104489 NonCoding TCONS_00173987 XLOC_104489 NonCoding NonCoding - 3:89908725-89909592 - TSS129211 383 1 TCONS_00173987_1 50 2 0.560046189376443 0 0 2.41617985125281e-05 0 0 0 0.000152263458260903 0 0 0 0 0 0 0 0 0 0 0 0 3.75531074182251e-05 0 0 0 0 0.000253259606692443 9.19774894454324e-05 0 0 0 0 XR_248811.1 LOC101929757 PREDICTED: Homo sapiens uncharacterized LOC101929757 (LOC101929757), misc_RNA. 2e-29 132 79.19 0.441253263707572 0 noncoding GAGCCAAATAAAACAGAATGATTAAACAGAAAGATAAAAGCCATACCGAGGACAGGGTGGATGGGAAGGCAGAAAGGATTGATGAGCAGTGTGGAAACATGAAATGATTACTACAAGAGATCAAAGGAATACCATTCCTCAGTGGGAAGGAGCTGGGCTTGCCTGGAAGTAGGGAATTGTTCCCAATATCAGTCACGCCCATATCCCATCATCCAGAAAAGGAGTTCTTCAGATGGGCAATTCTATCAGGAAACTCTCTGTCTCTCTTTGGTCATGTTTCCTTGGGAAACACAGGAATACCACATGGAATACCACATGTGGCACAGGATTACCACATGATTGCAACTCGGAGGCTCGGAGTACTGAGGAAGGAGTGGCACAGG TCONS_00170587 TCONS_00170588 r 5' 4364 TCONS_00170587 TCONS_00170588 r 5' 3763 EMBV3_20090 CAGAGTACAGCTCAGAGTGCACCACCGAGGTCACCTATAGCTGGCCTGACTACAGACACA Gene GeneID:522480|REEP6:NM_001038135:68_cdna Constitutive 0 NULL GeneID:522480 7 GENE REEP6 MGC134618 receptor accessory protein 6 EMBV3_02448 ATGCTCAGCCTGGCACTCTGTGATGACCTAGAGGGATGGTATATGGGGAGGGGTGGGAGA Gene BVV0102_114117 + 0 NULL GK000004.2:10654278-11035473 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11577 TCTTCTATGTGAAACTTGAAATGAGGAAAACCAATTCTCGTGTATATCATGCAAGCGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34524 GGACCAGAAATTATGGGTTGTACCGGGTGCCAGATAGATTGGAAAAAAGGGAAGAATGTC Gene GeneID:615266|LOC615266:XM_002694220:98_cdna Constitutive 0 NULL GeneID:615266 16 GENE LOC615266 NULL similar to rCG48740 EMBV3_34202 GTGGGCATTGTCTTCACTGATGGCCGGAGCCAGGACTACATTAACGATGCTGCCAAGAAA Gene GeneID:512059|MATN1:NM_001143866:100_cdna Constitutive 0 NULL GeneID:512059 2 GENE MATN1 NULL matrilin 1, cartilage matrix protein EMBV3_17716 CGCAATGCTGGGGAAATGGTGAAATAGGCCAAAGAAGCTAATTTATTTTCTATTTCTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12862 TCTTCTTCCTGGTACTCCCCTGGCCCAGCCTCAGGGCAAAATAGAAGTATTTGTAGGCTA Gene GeneID:789485|LOC789485:XR_084705:224_cdna Constitutive 0 NULL GeneID:789485 7 PSEUDO LOC789485 NULL similar to Notch homolog 3 EMBV3_23455 AGCACCTTGCTGGCTCTTTCCCGCTGTTGTTAGTTTCACTTTGGAGTTCAACAAGGAACC Gene BVT0102_307667 - 0 NULL GK000024.2:44757615-45117069 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23976 GTGGTGCACATAGCCTGTGGAGACCTCTCTGACCACATTGTCTATGGCCTTATGGTTATT Gene GeneID:782941|LOC782941:XM_002693362:307_cdna Constitutive 0 NULL GeneID:782941 15 GENE LOC782941 NULL similar to olfactory receptor 600 (predicted) EMBV3_27016 GCAGGCAGCAAACCTTGGCAAACCCTATAGACCTTGGGGGACGGAGATTGGAGCTTTTTA Gene GeneID:408005|HEY1:NM_001001172:10_cdna Constitutive 0 NULL GeneID:408005 14 GENE HEY1 CHF2 MGC137326 hairy/enhancer-of-split related with YRPW motif 1 EMBV3_07955 CCACCAAGTGGGACATTTGCATGGACTGGGGGCTTTAAGGACTTAGAACAGACCTGTAAG Gene BVV0102_178026 + 0 NULL GK000003.2:28978573-29343181 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169324 TCONS_00169333 TCONS_00169328 TCONS_00169325 TCONS_00169319 TCONS_00169320 TCONS_00169330 TCONS_00169327 TCONS_00169326 TCONS_00169332 TCONS_00172739 TCONS_00169329 2 XLOC_103334 XLOC_104202 Coding TCONS_00169327 XLOC_103334 Coding Coding TRIM33 3:28963006-29093565 j TSS126810 7776 1 TCONS_00169327_5 717 19 0.940585793287275 0.00230563384001103 0.00180101327893109 0.00176873579433158 0.00108594216496383 0.00241444211804033 0.000421574643304949 0.00127216824588865 0.00176527578663155 0.00367633102403309 0.000405442121001641 6.87115166102258e-14 2.1086873517804e-10 0.000245743071093569 0.00036443660111865 0.00056177621512575 0.00603424610741296 0.00421422815121404 2.60828019743609e-08 0.0017991339250003 0.00209181152492835 0.000638082058365552 0.000139072219729217 0.00035078432769156 0.0030404504248601 0.00123024741336996 0.0015293613925708 3.30915799204123e-07 0.000357395534092566 4.31714571601207e-05 0.000401308852179562 XM_005204040.1 TRIM33 PREDICTED: Bos taurus tripartite motif containing 33 (TRIM33), 0.0 1.361e+04 100.00 0.970036008230453 NM_033020.2 TRIM33 Homo sapiens tripartite motif containing 33 (TRIM33), transcript 0.0 9030 86.43 0.970550411522634 TCONS_00169327_5 sp|Q9UPN9|TRI33_HUMAN TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33; 0.0 1357 93.20 0.99860529986053 2 coding 1 1 1 1 2.66961310562643 0.0430863592406174 -0.0542463856964644 0.317436253957884 TTGTCATATGGTTTGAAGTTGGTGTAATACGGTGCCCAGTATGCCGCCAAGAATGCAGACAAATAGACCTTGTGGATAATTATTTTGTGAAAGATACATCTGAAACCCCTAGCAGTTCTGATGAGAAGTCAGAACAGGTATGTACTAGTTGTGAAGACAATGCGAGTGCAGTTGGCTTTTGTGTCGAGTGTGGAGAATGGCTATGTAAGACATGCATTGAAGCACATCAAAGAGTAAAATTCACTAAGGATCACTTGATCAGGAAGAAAGAAGATGTCTCAGAGTCTGTTGGAGCATCTGGTCAGCGCCCTGTTTTCTGCCCTGTTCACAAACAAGAACAGTTGAAACTTTTCTGTGAAACGTGTGATAGACTGACATGTAGAGACTGTCAGCTATTGGAACACAAAGAACATAGGTATCAGTTTTTGGAAGAAGCTTTTCAAAACCAGAAAGGTGCAATTGAGAATCTACTGGCTAAGCTTCTTGAGAAGAAGAATTATGTTCATTTTGCAGCTACTCAGGTGCAGAATAGGATAAAAGAAGTAAATGAGACTAACAAACGAGTAGAACAGGAAATTAAAGTGGCCATTTTCACCCTTATCAATGAAATTAATAAGAAAGGAAAATCTCTCTTACAGCAGCTAGAGAATGTTACAAAAGAAAGACAGATGAAGTTACTACAGCAACAGAATGACATCACAGGCCTTTCCCGGCAGGTGAAACACGTTATGAACTTTACTAACTGGGCAATTGCAAGTGGTAGCAGCACGGCACTACTGTACAGCAAGCGACTGATTACTTTTCAGTTGCGCCATATTTTGAAAGCACGGTGTGATCCTGTCCCTGCTGCTAATGGAGCAATACGTTTCCATTGTGATCCTACCTTTTGGGCAAAGAATGTAGTCAATTTAGGTAATCTAGTAATAGAGAGTAAACCAGCTCCTGGTTATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGGACAAACCACATTAGTAAAACCCCTGGACAGATTAACTTAGCACAGCTTCGCCTTCAACATATGCAACAGCAAGTGTATGCACAGAAACAGCAGTTGCAGCAGATGAGGATGCAGCAGCCACCTGCACCCGTACCAACAACAACAACAACAACACAGCAGCACTCCAGACAGGCAGCCCCTCAGATGTTACAGCAACAGCCTCCAAGATTGATCAGTGTTCAAGCAATGCAAAGAGGCAACATGAATTGTGGAGCTTTCCAAGCCCATCAAATGAGATTGGCTCAGAATGCTACCCGAATACCAGGGATACCCAGGCACAGCGGCCCTCAGTATTCCATGATGCAGCCACATCTCCAAAGACAACATTCAAACCCAGGGCATGCTGGACCCTTTCCTGTTGTGTCAGTACATAACAACCCAGTCAATCCAACCAGCCCTACTACAGCTACTATGGCGAATGCAAATCGAGGTCCCACCAGCCCATCTGTTACTGCAATAGAATTAATTCCTTCGGTTACCAATCCAGAAAACCTGCCATCGCTGCCAGATATTCCACCTATACAGTTGGAAGATGCTGGTTCAAGTAGTTTAGATAATCTACTAAGTAGATACATCTCAGGCAGTCACCTACCCCCACAGCCCACAAGCACCATGAATCCCTCCCCAGGACCCTCTGCCCTATCTCCAGGATCATCAGGTTTATCCAATTCTCACACACCTGTGAGACCCCCTAGTACTTCTAGTACTGGTAGTCGAGGCAGCTGTGGGTCATCAGGAAGAACTGCTGAGAAGACCAATCTTAGTTTTAAGTCTGATCAAGTGAAGGTCAAGCAAGAACCTGGCACTGAAGATGAAATATGTAGCTTTTCAGGAGCTGTGAAACAGGAAAAGACTGAGGATGGCAGACGGAGTGCCTGCATGTTGAGCAGTCCTGAGAGTAGCTTGACACCACCTCTTTCAACCAACCTGCATCTAGAGAGTGAGTTGGATACATTAACAAGCCTGGAAAACCACGTGAAAACTGAACCTGCAGATATGAATGAAAGCTGCAAACAGTCAGGGCTCAACAGCCTTGTTAATGGAAAGTCCCCAGTTCGAAGCCTCATGCACAGGTCCGCAAGGATTGGAGGAGATGGCAGCAGCAAAGATGATGACCCAAATGAAGATTGGTGTGCTGTCTGCCAAAATGGAGGAGATCTCTTGTGCTGTGAAAAATGTCCAAAGGTCTTTCATCTAACTTGTCATGTTCCAACACTTCTTAGCTTTCCAAGTGGGGACTGGATATGCACATTTTGCAGAGATATTGGGAAGCCAGAAGTTGAATACGATTGTGATAATTTGCAACATAGTAAGAAGGGGAAAACTGCACAGGGCTTAAGCCCCGTGGACCAAAGGAAATGTGAACGTCTTCTGCTTTACCTCTATTGCCATGAATTAAGTATTGAATTCCAGGAACCAGTTCCTGCTTCGATACCAAACTACTATAAAATTATAAAGAAACCAATGGATTTATCCACCGTGAAAAAGAAGCTTCAGAAAAAACATTCCCAACACTACCAAATCCCAGATGATTTTGTGGCTGATGTTCGTTTGATCTTCAAGAACTGTGAAAGGTTTAATGAAGCTGATTCAGAAGTAGCTCAGGCAGGGAAAGCAGTTGCATTGTACTTTGAAGATAAACTCACAGAGATCTACTCAGACAGGACCTTCGCACCTTTGCCAGAGTTTGAGCAGGAAGAGGATGATGGTGAGGTAACTGAGGACTCTGATGAAGACTTTATTCAGCCCCGCAGAAAACGCCTAAAGTCAGATGAGAGACCAGTACATATAAAGTAAAATGACATGAACTTAAACCAGTTGTTCAAAAAAGAAAGAAAAACTTCTATTTAAGTGTTGCTGGAATATCCTGCCTACAGTGGGCTCCTTCTTGAAGAAGATGATAGCTTTTACACAGTATTAGATTGAAATAATGGACAGAAAACACATTCTGGTCAAGAAAGGGGGAAAGGACTCTATTTGCAACTTTAAAAGTGAAAACAAAAGTCAAAGTGAAATGATTTGAAGATTTCTGTTACTTCAGAGAATGGTTCTGATTGCTAGAATGGGCTGATGTTGATGATCATTTGGTATTGATTGGTGCAAATACTGAGTGTTCAAGTACTTAAGGATCATGTCACTGGTTAAGTTGTCTCTTTGGACTAGAGTGCACATTTACTAAAATGACTTTCATGTCTCTCCCTTCACACATATACAATACTGGGTTATTTTCTAGTCAAAAATCAAAGTTCTCAGATTCCACTTTGATATCAATCAGTGCAGATGTACATTAGATCATGCCATTATATTTTATCTCGTTTTGATGCTGTTGGGCCTTAGTTTTTATATTGGTTAAAATAATTCAACAGTAGATTTTCTGTTCATACTTAAAGACTTTGGGAAACATGCCTATTGAACTTCATTTAATCAACTCTAGTGTTGTACTGAAATAAATATGGTAACTTTTCAGTAGCAGATCATTTATAATAATCATTTCCAGAAAATACTTCCACAGAATTGTACTTCCCAATCAAATCATCTGATCACACATTTATTCCCATGAAAGGTAGAATGGTTGTTTGAAAATTAATCTAGTTTTCTGTACATTTAAAATTTGATTGAGGTGACAGCTGGCTCTTACCCCGTCTTCCTTCATATCGGTTTTCTGATAGACCACTATTGGCAAACAGTTATCTGTCAACTACCAAATGTGTAAAATTTTCTGTATTTCACTTTGTCTTATTTGTAAATAGTGAACTAAAACTTCTGGCAGATCAGCAACATTTGCTGAGCCTGTTTTTTAAGCTAATATGTATTCTTACTAATGTTCCTATCAAGAATGGATTTGTAATATATGCTGTCTATTTCTAATGTTCACATTCATATTTTGAGGTTCTATCTTATTTTAATAGAGAACAGACTTCTCAGAAAATCTTCAGAAGCAGCTTATTATTAAAATATCAAAATATTGAAATAAACCCGGTGGGGTTAGATTACTCATCCGTCCACCAAGTGGGACATTTGCATGGACTGGGGGCTTTAAGGACTTAGAACAGACCTGTAAGTATATCCTGAAGATGAGCCAATCAATCCCCACTTGAATGGTTACTGGAATAGACCCACCTTTACGACCCTGATTTTAGCACCCGAGGCAGATAAACTCACCTTGGCTCTGTTTCATTTTTCTTCTCTTCATTTGTGATGCTCAGATCCAAGATGTGTGTTCTAGACTGTGTACAGGCTTCTCTTTTGTTGAGTTAAAAATTTTAGTCCTACTTTTGTATGGACATACTAGAATGTAAAGTGACCAAAATAGAAGACTTGCCATTAGATATTTTTCAGATGTCAGCATATTTGTGGCAAATCATTTGCCTTTTTACAAATTCAGCTTAAACAGTTCAGACAGTAGACTACTCAGAAAAACTTATTTGACATAATTGTCTAAGAGGTAAATATTTTTTAGTGCGTATTGAATCAAATAAAGTGCTCTAAAGAAGTTATTACACAAATTTCTTTGGGTTGTTTTTCTTTAACATGTGGTGGAGGTAAACATGAATATGATTCAAGCCTTCTAATGGTGTATTAGTTTTATTATTGCTGTTGACTTCATTCTGTGGCTTTCTTTTAGCTTTTTCAGTTGTTACAAGTTAAACTTTAAAACATATACCAAAACTTATCAATTTACTCAAATCTCAAATTCTTTAGAACAGATATCTTATAAAAAGGAAAAATTATTTTAAAATACTTTTATCTATGTGCATTTTCCTCTTTCCTACAACATTCATGATTTCTGTTTATCAGGAGACTTACCTAAGGGTACATTTTGGTAAGTGATGAGTAGCAGTGTAACTTCATTTTGCCAAGCCATTGAGTGCTGATAGTTTGTGCTTGCTCTTCATGTGAATCCTTTTCATGGTCTTAGATAACACATTCTACCAGAAACAAATTGTAAGTAAAATATTTGATATTTGGGGCCTTAAAAGCTAATGTGTTCCCTTAAAGACATTTACATGTCAGATGGAGATTTTGGTTTTTATTTTCTTTTAATATTGGTTCTTAAAAAGCCAGTTATTGCCAGCATTTAATAGGTTCCATTTCTGTTAACAGAAGGTAGGTTCATACTGATGAGGAATTACTGTTAAATTATATAACTTATCAACAAACCACCATTATATAAAGGTATTCACTGTAGATTTCATTAAACTTTTTTTTCTTTCACATTCATCATTCACTGTGTTTCTAAGCTGATTTATTCACTAAACATGCCTGTTAAAGTATAAAAAATTTATATTCAGATATCTTACATTTTCCTGTTCATTAATGTTTTAAAAAGACAAACATTGAATATCAATCCCTGAAGTCCGTTTGTTTTAATACTCCCTTAAAATTGTATTCTTTGTTAAAAGGTAGTATTTTTGATTTGAAGATTTAAATATTTCCTTAAACTTTCACCACACTTGATTTTTCATTTCCACTAAGAACAAAGTGTTCCTCGGTCTGTTCCTCTGGCCTAAATTTGTATTTTTTAGCACTTGGGTCAGCTGATACAGTGAATGAGAGAACTGCTTTGCAAGGTGAAGCATGTATGTGTTCCAAAGTATGGTTAAGTTGTAGGTCAAGTTCTACTGAAACATAAAATCATTACTAGAGAAAGGTTAAGGCATTGAATCCACCGTCAAAATTATTCTTTTTGGAATCAACAAGGTACTTTCTGACTTCTATTCTTATATAAGGAAATTTTAAATAAATTTTAAAGTTAGTTAATTCTAATTTTTTTGTTACAACATTGAGATTTTTAGTTACTCCAAAGAAATAACACTTTTAAATAGAAGCAAAAGGTTTATAGTCTGCAAATTGTGGATTTATCAATTACCTCAGCAGGTATCCTGCCATGTAACTATTAATGATTAGTTTTAATAAGCCAGTAGTCTTAGGTTTATTGGACTATGCTCTTGGGTTGTGGCCTACCATCCATTATTCTCTTAGTATTTAAAATGGAGTAAATGCTGTGGCCCCATCTCCCTTGGCCTTTTAAAATCCCTTATCCATGCCCACTAATATACAACATATGAAGTATAAAAAATGCCATTTCTTGAGGTCAGCACTGCTTATTTGCATACTCAACATTGGATCAGTGAGTAGTTTTATAGTAGTCTACCCTCCCCAACTTCCCTAATTCAAACAATCAGGTTCTTAAGTCATGCCACGAATTCTTAACTCATACTGTCTATATTAATAATCTGCTTGAGGTGATCCAAGGTGTTAGGTGAATCACAACTTGATCATCATATACCAGACCTGGATGTTTATTTCCCACAGTTACCTTCTCCTTGATAAAGCAATAACACTGCTTTAAGTCTGTTGCCTAATAGCATGTCATAATCCTCTCGTGGATGGTGATTTTATAGGAAAGTTTGTATGCATATCACCCAATCTATCTTTTAAAAATTAAGGAATTTAAATGTATGCTGGACCTAATGACAATATATTGTGGCATTTTATTTTAAAAATTGGGGAAAGTTGCATATTTTTTTAAAAGTAGGCATTTGAGTAAAAAAATCGAAGGTACTTTTTTAAGAAAATTTATATGCCACAGTTTACATAGACATTTCAGATTTCAACATATACTCTTGATATAATGGTTTCTTTTACTTGGTCAAAATGCACGTATAGTATTTCTTCCATCTTAGTTCCTTGTGTTTGCCTTTGTGGTCTTTTATATATTTTTATTGTATCTGAGAAAGAAAATTATCTTCAAAAATAAGTCAATTTGGAAATATTTATTATAATCAAACTACAAAATGTACAAAATTAAGTTTAGCCCTTTTCTAGCAAGTGATCTTTAAAGTTAAAAATGCTGTTCTTTTAAATTCTCCAGATTTGTATGTGGGAGGGCACTGGAATGATCTTGCAAGTGCCACTGCAATATTCCCTTTCAAGTGTGGCCTAAATTTCAATCTTAAGGACGAAATGCATGTCTGCTCCTGGTCTGAAAATGTAGGCATTAATTATATTTTAAATCACAGTGAAACATGTATATAAGCCTATAACAAGATTTGTGCAATTTGAAAGCCTTTTGATTTTCTTTGTAGACGTACCTACACACGAAAGGGTTAAACTCACAGCCTTACTAGTTCCTTGTTTCCCCTCATTATTGTTCCCCTCTTCTCTCTCCTCATTATTATTACTAATACTACAGTTAATTTTTTTTGCACATAGTTAACTACCCTTCAATATGATTCTGAAAGAGAAAGTGCTGTTTCTGTGGTATTGTATTCTCTAAATAATCATATTTAATTTTTTTGAAACAAGGTTGCAGTTTCTAATTGTTCTATTCCTGTGTTTTTTGCTGGTGTGTAATAAAAGCAAGGTTTTCTTTTCATGGTTATTTAATACATTAGCTGCCTGTAAATATTTCTTGTTATAATGCTCTGGAATGTGTTGTAGAAGTTGTATTAGATTAGTTTAAAACCTTGTTTGAAAGCCACGTTGTTTTGGTTATTTCTATTAAATTAGAAAATTGAAAAAGTTTTCAAATGAATCTTTTTTCTTCCTCCTCTTTGAGACTTAATCACTTAGATTTTAAAAATTTATACTCTGTGAGGCACCGGAGATACTTTCATGAACAAGATAAAATACAGTCCATGCCCTCCCAAATTGTTATACTCCATTTGAGAATGATAGGGATTAACACAGAATATAGTTAAGTAACACAGGGAAGGATCTAACCCCAAATTTTGTTCATCAGGAAAAT EMBV3_25860 CCTTGCAGTCTTCTAGGTGCTAGAGGTACAGGGATGAACTAGACAAAGCCTTGACCTTTG Gene BVV0102_285658 + 0 NULL GK000030.2:2764379-2886244 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248867 1 XLOC_151810 NonCoding TCONS_00248867 XLOC_151810 NonCoding NonCoding - X:2830690-2831233 - TSS186088 543 1 TCONS_00248867_1 46 0.202578268876611 1 0 0 0 0 0 0 0 0 0.000272316912545289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NM_001214906.1 ZNF48 Homo sapiens zinc finger protein 48 (ZNF48), transcript variant 2, 2e-06 57.2 80.33 0.110497237569061 0 noncoding GAATTAGAACCATGTTCACTGTTAGGGGAGTTTCACTTCTCAAGGTAAACTGTGCATTGGATTCACAACTTTTATATAGTATCAAGTGTACAGAATGTGAGCTTCAGAGGTCAAGGCTTTGTCTAGTTCATCCCTGTACCACTAGCACCTAGAAGACTGCCAGGTACACAGTAGATATTCAGTATTAGTTGAATGGGTGAATGAAAGACTATACTATGTATACATAATTATGATATAATTTGAATTTTCTCTGGGCTTGATATTTAAACTTACTTAGAAAAGAAAGTTTTTTTTTTTTTTTCCCACAACTGTTGTTCCCATTTATAAGATTGGCTAATTAAGCACTGAGTTGGAAATTTCACAAAACTTCACTTACTAGAGTAGCTAACAGCTGACTGATCCTTTGCCAGCAGAAGAGGAATGGCACAGAAGGGATTCATTACTTGATGATTTTCTGAGCTTAAACAATCATCTGTTAACTGGGTCTTGCCAGAGATACTTATTGGCAAACCCACGTCGAAGGCTGTCATTCTTGGGCAACAT TCONS_00243573 . 5' 12223 TCONS_00243573 . 5' 12223 EMBV3_36616 ATCTGCTAGCTCTAAGTCCAAACCAGAAAAGATGTCCAGACCCACTAGGAAGAAGTCTCC Gene GeneID:618247|LOC618247:XM_002686553:822_cdna Constitutive 2 NULL GeneID:618247 3 GENE LOC618247 NULL similar to ZMYM6 protein EMBV3_38121 CTCCAGGACGCGTCTGGCACTGATGGGAAGGTGGCAGTGAACCTGGCCAAGCTGAAGCTG Variant GeneID:100337192|LOC100337192:XM_002688906:188_cdna 186^405 1 EMBV3_09635 GeneID:100337192 7 GENE LOC100337192 NULL G protein-coupled receptor 108-like EMBV3_29387 TCCTGCGCAACCTGAGGTAGCACTGAAGAGGGTCCCCAGCCCTGCCCCAGCCCCCAAGGA Variant GeneID:534002|LOC534002:XM_002697931:592_cdna 368^462 1 EMBV3_20937 GeneID:534002 25 GENE LOC534002 NULL similar to serine/arginine repetitive matrix 2 EMBV3_20774 CTGCAACCCCATTGGCGCAGCCAGGGGCCAGTTATGTTTCCCAATCTAGTCCTTTTATCA Gene BVT0102_383738 + 0 NULL GK000011.2:72287766-72299296 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025396 1 XLOC_014747 Coding TCONS_00025396 XLOC_014747 NonCoding Coding - 11:72290876-72293479 - TSS18444 2059 2 TCONS_00025396_3 72 0.194754735308402 2 0.20945426594927 0.000350612901008004 0.000492764989248461 0.000585553331382145 0.000119068822750235 8.16855629139389e-05 0.000158092561286511 0.000179782015342973 0.00056144110201337 2.34530066771204e-05 3.99659679538686e-06 0 6.15289606957501e-06 0.000127233934787137 2.28460558034559e-05 0.000118221952917958 0.000177631362202096 0.000395099191783491 0.000609299528607309 2.47665141856103e-311 1.61432636357132e-05 0.000214749885674532 0.000720801934256426 0.00103018334416246 0.000176707538942784 0.000385433021562044 0.000106075544261391 0.000221897970380686 2.94488221247851e-40 5.89433923799288e-05 0.000183419569330504 XM_003582803.2 GTF3C2 PREDICTED: Bos taurus general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant X1, mRNA. 0.0 1142 100.00 0.306945118989801 XM_005264273.1 GTF3C2 PREDICTED: Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant X2, mRNA. 2e-63 248 76.97 0.165128703254007 0 noncoding 0 0 0 0 -0.379001856985155 0.103015316260063 0.0291504191642203 0.58684828123784 AGATATATATGTATTTGCATGAGTATAAATACAGAAAATGTCTTGGACTTGTAACAAAAAACTGCCTAGGTAGATGTGGTCCGGGAGACCGGAGAGAGAAGTGGAAAAGAGTCTTCACTATACCCTATGCATCTTTTGAATTTCGAATCATGTGAATGTCTTATCCCCCAAATAGATACAATTATTAATATGAGAAAGATTTTGCAATAGTTGAAGTCAAAGATAATCTGAGGCAATAGGAATGGCAAAGAGGTTTGTTCATTAGAGAAATAAATGCTTGAAACAAGTTTTTTAATGAAGAGAGAAATGCTTGAAATTGAGAGGAACCACAGCCTCCACTGCACCCACTTCAGCACCCTCACAAAGCCTGCCCTAAGCCACAGCACAGCCTTAGCTTGTTTTAGGCCACTTAAGACGAATGGGATGGGAGTCCCCTTGCTCTAGCTTTTAAATCCTGGCTAGCTTGAAGCGATTAGCAGCAGCAGCAGCAGCTTCTCCCTTGTTTTTCATAAATATTTTGGGTAACCAAGGGAATTTAATAGATGAGATTATCTGGGAAAAGACTGGTTTACCCCATCCTTTCTTGTCCATTTTTGTATATCCTGAACTCTCCTATTCGGTATATGCAGACCTGTGTGATTTACAGCTTTAAATGCCTCAGGAAACGGCAGAAGTTTGTTACATTCTTTCTCCAACCACAACCGACCACCCAGGGAGGGAGTGGGGAGAGGCCTACGACCAAGGGGAGGGTCCAAGCCTGAGGATCATTTGAGTAGAGCGTCTCCAAGCCAGGCTTTTCTTCTGCTCCTCCCCTTCACTGTGTTTCGGTCTCGGGTCCATCCCTGGCTTACACTAGTGGCTGGATCTGCTGGGGGCTGCCCTTGGGGCGGAAGCCGGAGTCGTTCCCCCGCGGCCCGAGGCACGGATTCCTTTGTCTCCCAGGCTTCCGCTCGACGGCGCGGGGGTTGCGGCACTAAGACATTGGGAACCAATTCCGGCTCCGCTTTTCCGCCTCTGCTCAGCATCGCGACCTCCAGCCCCCGAGCTCCTACGGAAACCGCCGTGCTCCCCACCTCCCTAACCCACGGTGGCAGCCCCTATCTCTGATCTCCTCGGGTTTCGCCTTCTTTCCCAGTGAGGTGTCCGTAACATCTTATCCTGTGTCCGGGCCCCGGCGCTGCGAACATTGCAAACCTCGAACTCTGCGAACCTACTGTAGTCCTCAGCCTTAGGAAACTCACGGCTCACTTCCCGAACAGGCTAGTGGTGAAAGCTAACCCCACTCCCAGGACTGAGAAAGAGCAAGCGGTCACCCCTAGGGTGGTGGCGGGTCAGTCTTCTCATTGTAGTGTGTTCAGCCTCTTCCTCGGCGAGGTCCTTGTAACCCTGGGGGTTGTGCCCCGCGCGCTGCAACCCCATTGGCGCAGCCAGGGGCCAGTTATGTTTCCCAATCTAGTCCTTTTATCACGCAGCAACTTGGCTTTCTGTTCCGAAAGGGAGAGGTGGCGACTTGAGCTTCACCCGCGAAACTCACTTTGTTAAAAGTGCAGGGTGCAAGCCGAGGGCCCCAGCGGCATATTGTTACACAAACCTCATTCCTGTGCCTTCGTTCCTTTTTGCCACCCTTTCTTATCATCTGTAGTACTTTCTTAATTGTTTTCTTTAAATTGATTTAATTTTAAGGTTTAAGTGCTTTAGTCTTGATCTAACTAGTCCAGGGATTTCATGGACTAGTTACAGTTTTTTTAAATACAAGTTAAAATAAAAACATAATTAATCAAATAAAATTGTTCAATTTTGTATCAGAAGTCATCTTGCAGACCACCAGTTGTACCATGGGAACACTTTGGAAATAATGTATTAGACCATGCCGTGTGTGTAAAATAATTCCATACCTGCAGAACAGTGTTACCTAATCATTTTCTGTGGTTGGGGAGATCAGGCTGGCGGCCTTGGAGCAGCATGGGAACCAGACAATTTGGGGTGCAGATTTAAAATTTTATAAATCCTGGTACAAATTTACTAAACCTCTTTTGCTTGTGTCCAAAATTTGTATTGT TCONS_00025397 s 5' 0 TCONS_00025397 s 5' 0 EMBV3_28047 TGAACTTGAGGAGGTGGGAGCCCTGGAGATTTGCTCCCTGCTGTCTCTCAGCATTTAGAA Gene BVV0102_458907 + 1 EMBV3_09880 GK000007.2:44760149-44773997 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20010 CCTCCGTTCTGGGCTTCTGATAGATTCCACACATTCAACCAGGAGGAGCCCCATAGCTAA Gene GeneID:100336982|LOC100336982:XM_002693883:183_cdna Constitutive 0 NULL GeneID:100336982 16 GENE LOC100336982 NULL hypothetical protein LOC100336982 EMBV3_25233 CAGGAATTGGGCAGAATTAGTAAGAGCAGTGCTGTCCAGTATACATCTAACAAGAGCCAC Gene BVV0101_088992 + 0 NULL GK000025.2:16020003-16531759 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14349 TTGCTTAAGAGTAATCGGAGGAGGGGCTTCCCTGATGATCCAGTGGTTAAGAATCAGCCC Gene BVV0102_288859 + 0 NULL GK000006.2:17729748-17789595 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00207124 1 XLOC_125642 Coding TCONS_00207124 XLOC_125642 Coding Coding - 6:17735363-17737406 - TSS154631 2043 2 TCONS_00207124_4 101 0.577581987273617 1 0 1.66491668952076e-06 0 0 0 0 0 0 9.65038171326636e-07 0 0.000127382109782999 0 7.55508692403235e-05 0 0 0 0.000129278563190742 0.000150338776983501 0 0 0 1.06137016393288e-07 0.000211880863474184 0.000152676200139779 6.83824722334931e-07 0 3.83175875433624e-07 9.5597133036232e-07 0 6.41576923513159e-05 0 XM_005197460.1 LOC101908419 PREDICTED: Bos taurus secretory phospholipase A2 receptor-like (LOC101908419), mRNA. 0.0 677 86.18 0.281448849730788 0 coding 0 0 0 0 -0.298991612783252 0.111146240480284 -0.00182605761221309 0.972289563933208 ATTAAGCCTGCTTCAGGCAAGGGTGTGCGCGTGCTGTCTCTTCAGTCATGTCTGACTGTTTGCAATCCCACTAGGCTCCTCTGTTCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGAGGATCTTCCTGATCCAGGATTTGAACCCTGGTCTCCTGCATTGCAGGCAGACTTTTTACCAACTGAGCTACAAAGGAAGCCCCCAAAGAACTGCACCCTCTGGGGTTCGAACTCTGGACCTACAGATTATGAGACTGATGCGCTGCCTGCTGCGCTAAGAAGGCAGAACTGAGAAGCTCCTTGGGGCTTCCATATCAGGCCGTCATTGGCTGCAGGACAAAGAGGGGACAAAGTTTCCAGACAACTCTAGAAAGCCAACTCCCTTGGGCAGAGGGTAGTTCTCCAGAGAAAGGAGAGCCCTGAGCCATCAGCAACCATTGCTTAAGAGTAATCGGAGGAGGGGCTTCCCTGATGATCCAGTGGTTAAGAATCAGCCCTTCCACTGCAGGGTATATAGGTTCCATCCCTGATCAGGGAAACTAAGATTCACACATACCCCAGGGCTTCTGAAGTCCATGCATTCTAGAGCCTGCGCAGCCTAAAGAAAGAAAAAATAGGGCTTCCCTGGTGACTCAGAAGGTAAAAAATCCACATGCAATGCAGGAGACCTGGGTTCGATCTCTGGGTCTGGAAGATCCCCTGGAGAAGGAAACAGCTACCCACTCCAGTGTCCTGACTTGGAGAATTCCATTGACAGAGGAGCCTGGCGGGCGACAGTCCAAGGGGTCGCAGAGAATCAGACAGGACTGAGTGACTTTCACTTTCAGGAGTTGGGGGATGGGTACACCAAGCTGATGAGTCTGTCTGGGTGGGGTCCCACAAGCATCCATTCAAAGGGGATCCTTCTTTTAAGCGTAGAAGAGATTTGTTTGTGAGTCTGCTAACACATTTTCTTTTATTTGGAGACAGAAAAGCATAATCCTTCACTTAGGTATCTGAACATGTAAACAGCATTTTAAAACTATTTTCTTGTGCTGTCAGGAAAAAAAATAAAAAAACAAACAAAATTGAAAAATTCTACATATTAGGCACACATCTACTCTTAAGCAGGAAACAATGAAGTGTGCTCCGAGGTGTCAACTCGAAAATACCCACATATCCCACCCAGATGCTGAGCAACTGTGAATTCCTTCCCCCCAAAGACTGAGGTTGAAAAAACTGGTGAGAAAATAGAGGAAACAGATTTCCCTGAGTGGGAGTGTTTTGAATTTAAAGTCCAAAGGCAGGGTAGGGTGGTCTGGGAAGGAGGCAATCTAGCTCAGGATGGAAAGGAAACGGGAAGGGTCATGGTGGGGCTCTGCCCTGACTCCATTGCCTTGGGACACCCACAGCCTACAGATCTCCCAGGTGTCCTACAGATCTACACTGCTCCAGGTGTCCCAACAGTATTCAGTTCAGTTGCTCAGTCGAGTCTGACTCTTTGCAACCCCATCGACTGCAGCACGGCAGGCTTCCCTGTCCATCACCAACTCCCAGAGCCTACTCAAACTCACGTCCATCGCATCGGTGATGGCATCCAAAAATCTCATCCTCTGTCATCCCCTTCTCCTCCCACCTTCAATCTCTCCCAGCATCAGGGTCTTTTCAAATGATCAGTTCTTCCCATCAGGTGGCCGAAGTACTGAAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGACTGATTTCCTTCAGGATTGACTGGTTCAATCTCCTTGCAGTTGAAGGGACCCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGTGCTCAGCTTTCCTTATGGTCCAGCTCTCACATTCATTCATGACTACTAGAAAAACCGTAAATTTGACTAGATGGACCTTTGTTGGTAAAGTAATGTTTCTGCTTTTATATGCTGCCTAGATTGGTCATAACTGTTCTTCCAAGGAGCAAGCATCTTTTAATTTCATGCCTGCAGTCACCATCTGCAGCGATTTAGGA TCONS_00202590 TCONS_00202592 TCONS_00202593 TCONS_00202591 . 3' 4726 TCONS_00202590 TCONS_00202592 TCONS_00202593 TCONS_00202591 . 3' 6768 EMBV3_34913 CCATAAGGCTCCTGGACCAAAAGTCCCGAACACCGAAGCCTTGAACCTTCATACCTAGAC Gene GeneID:281044|CCL8:NM_174007:173_cdna Constitutive 0 NULL GeneID:281044 19 GENE CCL8 SCYA8 chemokine (C-C motif) ligand 8 EMBV3_33777 TCTGAACATCGCGGCCGGCGTGTGGATGGTGATGGCGGTCGTTCCCATCGTCATCAGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26021 GTGGACCACGGATCTCACGAGGAGCCAGACCTTGACCCACCCAGGGAGGAGTACAGATAA Gene GeneID:788684|PSORS1C2:NM_001080374:231_cdna Constitutive 0 NULL GeneID:788684 23 GENE PSORS1C2 MGC155225 psoriasis susceptibility 1 candidate 2 EMBV3_14767 CTTCGCGCAGAGCTCCAACTACGCACAGCATCTGCGCGTGCACACGGGCGAGAAGCCGTA Gene GeneID:100135053|ZNF771:NM_001113729:197_cdna Constitutive 0 NULL GeneID:100135053 25 GENE ZNF771 MGC148695 zinc finger protein 771 EMBV3_36877 CCAACCTATGGACCAGCCACGTATGAACAAGTCATGTGATCAAAGCAACTCAACAGGGCC Gene BVT0102_026233 + 0 NULL GK000023.2:47351929-47353876 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133600 TCONS_00135369 TCONS_00135377 TCONS_00135373 TCONS_00135372 TCONS_00135374 TCONS_00135368 TCONS_00135375 TCONS_00135370 TCONS_00135376 TCONS_00135371 2 XLOC_081150 XLOC_081700 Coding TCONS_00133600 XLOC_081150 NonCoding NonCoding TXNDC5 23:47336436-47353975 x TSS99738 1387 2 TCONS_00133600_2 96 2 0.921028623560269 0.00189644785956644 1.78142726809626e-96 0.000532293033662091 0.000359141441641737 0.000986861675606063 4.50220495846229e-58 9.63722730340583e-184 6.66457585895661e-113 0.000336217220579414 8.23796305713015e-23 3.21960222879322e-05 1.98480193724814e-05 2.96563195571484e-05 1.83489495876538e-237 2.41564383259813e-82 0.00661046415135051 0.00117341647418973 0.000959497553905023 7.99303453951188e-27 9.77358836250986e-15 0.000134161009070942 0.000692625118888774 0.000417861474265349 0.00429659062857233 0.00178015081623555 3.27368772032826e-121 0.000628359750405135 2.07073263235597e-05 0.000154829954346 0.000497749187295864 NM_001206732.1 TXNDC5 Bos taurus thioredoxin domain containing 5 (endoplasmic reticulum) (TXNDC5), mRNA. 0.0 2482 99.93 0.99351117519827 NR_037616.1 BLOC1S5-TXNDC5 Homo sapiens BLOC1S5-TXNDC5 readthrough (NMD candidate) (BLOC1S5-TXNDC5), non-coding RNA. 3e-59 233 68.93 0.441240086517664 0 noncoding 0 0 0 0 0.000757242624601819 0.996112728487709 0.0224751910109266 0.666954046540001 GCTCTGGGGCGGCAGGCAAAGGACGAGCTGTGAGCCCGGCGGGGCGCCGTCCCTCGGCCGCTCCCTGCTTCCCCGCAGCGGTGACTCAGAGATCCGAATGTACTAAACTCGTGCTGTCTTCTCCGTGTGTGTTTTTAAGCCAACACACCCTACAGATTCTTAAGTTTCTCTAAGTAAATGTGTAACTCACGATCCCTTTGCAAACTAAATATTTTCGGTGGCGACCTACCATCCATTCCCCCCTTTAACTTGCTCTTGGTGAAATCGAAATGGTTTCCTTTGAGACTAAAACAGAGTCGAGGAAAACCCAACTGCCAGACTACTTTTGGCTCCCGAGTGATTCTGGTGACAGCGTCATCCAAAGCATTGTTTTCAAAGGGCCCACGAGTCCTAGCCAGGTGGCCTTGCCTTGTGGCCCTGTTGAGTTGCTTTGATCACATGACTTGTTCATACGTGGCTGGTCCATAGGTTGGAGCAGATTTCACACACAAACCCCTGATGCCTGTGGAAGAGCCACTTGTCCAGCCCCTCTGGACCTCCTGTCTCTGCGGGTGCCTCTCACGGAGGGTGGTGAGCCGCCGTGAAAGCCGTGGTACCTGACACGTGCCTGATTAAGATAGTGCCGCTGCCATGGCCTTGTGTGGGTGTTGACACTTGACCGATTGCTTATTACTGTTCAAGGAATACTTCTGTCTCTCCTGCAAGATTTCATTTGGGAATGTGAAGCCAGAGTCCCTGTGAACGTCAGGATTCGATGTCTCTCGTGGAAACTGTGGACGTGGGAAGTGCCACACAGCTCGTCGTGACCCTTCTAAGAACTCCTAGGAAGGTTGTGATTGTCTCTGCCTCCCAGGAGGGGGCAGGAGGGCTGCACGAACTCTCCCAGGTCGGGTGTCGGGGACCGGGAACACCCCGCGGCCCCGCAGCAGGTGGCGGCAGATGCCCTGTGTTCGGTCCGCCTTCAGGAGGCCGCCCATCTCCTGTGTGCAGAGGGGATTGACTCGACCTCCAGACCAAGGCAGGCAGGGTTGCAGTCGGCCATGTCCCTGGTGTCCTGATTCACGCCATCCTGGGTATAAAGCCCTTTTACCGACGCCCTTGGAAATCAGCCGCCGTAGGCCTAGGCTCCCTTAAGGTATGTAACCTGTACATCCTTCCGCATCAGTTAGCCCTCCTGATAACACCCTTCGCCCCACCGCCCTTGCTCAGGCAACATGGCTGCTTAGTGAGAAACGAGACCCCGTCCACTGTCCGCAGCAGATGAAACAGCAGGATCCTGGCCAGCCTCTGCCTTAAAGGAGATCTTTATTCATGTATGGTTCACAGATGTTCTTAAAAAAAAAACCCAACTTTCTAGAGAAGCACAATCTTCATGAGTGGCTTCGGC TCONS_00135364 TCONS_00135378 r 5' 0 TCONS_00135364 TCONS_00135378 r 5' 0 EMBV3_41845 GAATTCCAGCGTATGTCTGCGCTCCGCTTAGCAGCATGCAAAAGGAAAGAGCAAGAACAC Gene GeneID:503584|ONECUT1:XM_002690920:219_cdna Constitutive 0 NULL GeneID:503584 10 GENE ONECUT1 HNF-6a one cut homeobox 1 EMBV3_31885 GGCCACCCGTTTGTGGAAGAGCTTCAGAAATCAGGAGGCAAGAGCAGCTCCGCACTGCAC Variant GeneID:617636|MMAB:NM_001079632:285_cdna 388^473 1 EMBV3_42443 GeneID:617636 17 GENE MMAB ATR methylmalonic aciduria (cobalamin deficiency) cblB type EMBV3_31572 TCACGGTCGGATCAACCCCTACTTGAGCTCTCCCTGCCACATTGAGATGATCCTTACTGA Gene GeneID:785477|LOC785477:XR_084025:463_cdna Constitutive 0 NULL GeneID:785477 22 PSEUDO LOC785477 NULL similar to Rpl17 protein EMBV3_03100 TGTTCCCCCTTCTAGACTATGGAGGTTTTATTCACTACAGAGCAATGACCTCACCCGAGG Gene GeneID:513986|MTMR7:NM_001075641:52_cdna Constitutive 1 NULL GeneID:513986 27 GENE MTMR7 MGC139687 myotubularin related protein 7 EMBV3_22191 TGCACCATGAGATCTCTCTGAAGGCCTCTCCACCTCACACCAGTTATGGTTACGAGTTCT Gene GeneID:518124|LOC518124:XM_002689204:97_cdna Constitutive 0 NULL GeneID:518124 7 GENE LOC518124 NULL similar to Os01g0835900 EMBV3_42189 CAGGCACTTGACCCTTGGTGTAGCTTCTGTTCGACTTTTTATCACGGGAACGGATTGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39857 GCTGTCGAGAACAAACCCTCCTACTCAGAAACCACCCACCATTGGACCAGTTGCCGATAG Variant GeneID:540815|ABI1:NM_001076241:151_cdna 659^919 1 EMBV3_29193 GeneID:540815 13 GENE ABI1 MGC139877 abl-interactor 1 EMBV3_10455 CCTGCCCTGTGGGAGAAGCACAGTCCGCAGGTACCTCTGCGACTTCACCTACTATACCTC Variant GeneID:615089|PGPEP1:NM_001109983:116_cdna 281^513 3 EMBV3_40548 GeneID:615089 7 GENE PGPEP1 NULL pyroglutamyl-peptidase I EMBV3_00786 TGGTTATCCAGAGGAGAGCATCGAATGGGGGTTGAACATCTCAGCAATGCCCTTTTGGTG Gene GeneID:525594|TOMM20L:XM_002690918:213_cdna Constitutive 0 NULL GeneID:525594 10 GENE TOMM20L NULL translocase of outer mitochondrial membrane 20 homolog (yeast)-like EMBV3_02789 CTACGTGAACATGGGTGCATTGAGGATGCCTTTCCAACAGGTTCAGGCACAGCTACAGCT Gene GeneID:615159|SHOX:XM_002683610:4_cdna Constitutive 0 NULL GeneID:615159 2 GENE SHOX NULL short stature homeobox EMBV3_32498 AGAAGAAGCCCTTTGAGCAGCACTGGAGGAAGCACACGCTCTCCTACGTTGACATCAAGA Gene GeneID:281480|SDHA:NM_174178:11_cdna Constitutive 1 NULL GeneID:281480 20 GENE SDHA MGC127962 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) EMBV3_07319 GCTCAGCCATCCAGAAACAGTTGTAGTCAGAAGACATCATTGGTCCTGTGTTTCCTACGG Gene GeneID:513510|GTF2H1:NM_001046150:22_cdna UTR3_Alt 2 NULL GeneID:513510 29 GENE GTF2H1 MGC128582 general transcription factor IIH, polypeptide 1, 62kDa EMBV3_39631 GGCCACACTTATTCATGTGCTGTCCTTTTGGGGACAGGCTCACAAGTCCCAGATTACCAT Gene BVV0102_051475 + 0 NULL GK000019.2:15810653-16110979 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40686 CTGTGTCCTGATGGTGGCCTTCTCCTGCTCATTGCCTCATTTCCACTCACTCCTACACAT Gene GeneID:787071|LOC787071:XM_002691544:26_cdna Constitutive 0 NULL GeneID:787071 11 GENE LOC787071 NULL similar to olfactory receptor Olr418 EMBV3_22495 TAGATCAGCTTTCAGCCGCTCATCTCGCCAGGAATATGGGGCAGCAGATCCAGGTTTTAC Gene GeneID:100336559|LOC100336559:XM_002699925:58_cdna Constitutive 0 NULL GeneID:100336559 X GENE LOC100336559 NULL leucine-rich repeats and calponin homology (CH) domain containing 2-like EMBV3_08010 TATCAGTGTTAGTCATTGATAATGTCTGAAGCTTAACGTCCAGTGATTGGCCTTTGCTTC Gene GeneID:535716|SCHIP1:NM_001046412:152_cdna Constitutive 0 NULL GeneID:535716 1 GENE SCHIP1 MGC128591 schwannomin interacting protein 1 EMBV3_38339 ACACAGACTCAGACTCGTTTACACGCAGAGCACTCGTCCACCCGAACGACAGTGACAGTT Gene GeneID:513317|TMEM175:NM_001075613:7_cdna Constitutive 1 NULL GeneID:513317 6 GENE TMEM175 MGC128440 transmembrane protein 175 EMBV3_38090 TTTGCAACTTCATGTCCCATGAGAAGTGCCTGAAGCACGTGAAGACCCCCTGCACGAGCG Gene GeneID:100336832|LOC100336832:XM_002688447:8_cdna Constitutive 0 NULL GeneID:100336832 6 GENE LOC100336832 NULL diacylglycerol kinase, theta-like EMBV3_04036 CCTCTGCGGCTATCTACGAGTCTTGTTCAGGGCAAATGATGTGAGGGTTGGCACATGAGT Gene GeneID:783467|LOC783467:XR_083638:130_cdna Constitutive 0 NULL GeneID:783467 3 PSEUDO LOC783467 NULL similar to NADH:ubiquinone oxidoreductase b17.2 subunit EMBV3_11353 CCTAGCAAATAGAACTGGGAAAACGGGCACTGTTTGAAAGACAGATATGTACCCAGCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37892 TTTATGGGACATAGAGATGAGCAAAGAGCCCAGCCAGCAGCGAGTGAAGAGATGGGGCTT Gene GeneID:517545|RGS6:XM_002691051:456_cdna Constitutive 0 NULL GeneID:517545 10 GENE RGS6 NULL regulator of G-protein signaling 6 EMBV3_30205 TCTATCAGCCAATGCAGGAGACATGGATATGATCTGTGATCCAGGAAGATCCCATATGCC Gene BVT0102_340330 + 0 NULL GK000009.2:44547196-44677061 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00240337 1 XLOC_147001 NonCoding TCONS_00240337 XLOC_147001 NonCoding NonCoding - 9:44550285-44551315 - TSS180015 1030 1 TCONS_00240337_1 44 0.632038834951456 1 0 5.28375942355979e-05 0.000165847860166816 3.59378533014588e-05 4.03114199423998e-05 0 0 0.000390668122870101 0 6.12826464456867e-05 0 0 0 0 0 0 0 0 0 0.000368990469105528 2.79279257291804e-05 2.94730815837056e-06 0 0 0 0.000107626760249149 8.89233978405023e-05 0.00025110690155804 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 1e-50 205 78.42 0.224271844660194 0 noncoding 0 0 0 0 -0.155230751369438 0.334051999270823 0.01092234113682 0.811521055752005 GAAAAAGACAATTGGCAGAAACTCTCAGGGAAAAAGGGGCTATACTCTTTCAATATCAATTACAATCCCTTTAATAGCCTGAATTTCAGTGCCTTGAAAGAGAAAGTAAGTTTTCTAAGTATGAACATGTGCAAAGATTTATCAACAAGGATATTCTTCACAGCCTTGTTTACAATAGTGCAGAATATCCCAAATGTCTACAATTGGCCTTAACTCAATAATTTATAGTGTTCATATGCAGGCATAAAAATGTGGGAAAGAATATCAGTGACATGGGGAAATGGTCATATGGACTAGGTGAAAATCAGGATCAAAAGGAGTTATTTTAGTAATTCTTGCCTGGAGAATTCCATGGATGGGGGCTACAGTCCATGGGATCACAGAGAGTCAGATACGACTGAGTGACTAACACAGACGTATTTAAATATATATTTAAAATTGTGTGGTATGTATACGTGTATGAAAAACCAAAGTTGAGCTTCCCTGGTGATTCAGTGGTAAAGAATCTATCAGCCAATGCAGGAGACATGGATATGATCTGTGATCCAGGAAGATCCCATATGCCATGGAGCAACCAAGCCCGTCTATTGAGCCTGTGCTCTAGAGCCTGGGAGCTGCAGCTACTGAAGCCCACACACCCTAGAGCCTGTGCTCTGCAATGAGAGAAGTCATCACAACGAGAAGCTCATGCACTGCAACTGGAGAAAGCCCACGCAGCAACGAAGACACAGCACAACCATAAACAAATAAAATTATTTTAAAAAAAAGGAACATCCAAAGTCAAAAGAACAAAGGGAAAGACTGGCAGTGGGATTACACATCATTTTTATTTTCATGGTTTTTCTGTGTTCCTTAATTTTTCCCCGAAGAACACAGACTACTTTTATAATTAGAAAGAAAACTATTTTCAAATAAATTTTCAAAAATGTCAATTCTGATATCATAAAGGATTTTACTCCCTGTCAGGATGAAGCCTAAAGAGGAGACTCATGTCCAGCAAGGGAGAAAAAAAAATCAAGAAGGACAGCAC TCONS_00237305 . 5' 91833 TCONS_00237305 . 5' 91833 EMBV3_19952 AAAGATCTGAGACGACGCCTTGGTCCCTGGAGGCAGCTGCATCTCAGGAAAGCCAGGCTT Gene BVT0101_004642 + 0 NULL GK000016.2:31436505-31456107 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069011 TCONS_00069013 TCONS_00069014 TCONS_00069019 TCONS_00069018 TCONS_00069015 TCONS_00069016 TCONS_00069010 TCONS_00069012 TCONS_00069009 TCONS_00069017 1 XLOC_041843 Coding TCONS_00069010 XLOC_041843 Coding Coding CNST 16:31453529-31463861 j TSS51539 3663 1 TCONS_00069010_1 89 0.0821730821730822 3 0.645726454360662 0.000133024394201162 2.91484383308928e-75 5.74779294058486e-92 0.000236902336465413 4.16957338770929e-45 8.63198863331387e-39 2.6816290665077e-19 3.10802943099032e-51 2.97687850830944e-35 1.55400940169537e-05 5.18187775787075e-06 4.69609812272095e-05 5.44470729759885e-52 1.79494848068767e-110 1.09241375826429e-47 0.0011653234750378 6.14006518797483e-13 0.000760836052536642 3.66181967465501e-62 2.06272524864867e-35 2.15250811958074e-19 0.000120780633105801 0.000351732100358811 0.00126971278403048 3.69901765195098e-05 4.42169136064309e-62 1.43507088898235e-82 7.39510023715449e-05 3.38713629791109e-05 0.000629391435727683 XM_005216835.1 CNST PREDICTED: Bos taurus consortin, connexin sorting protein (CNST), 0.0 5402 100.00 0.817362817362817 NM_152609.2 CNST Homo sapiens consortin, connexin sorting protein (CNST), transcript 0.0 1939 79.45 0.617799617799618 TCONS_00069010_1 sp|Q6PJW8|CNST_HUMAN CNST_HUMAN Consortin; 3e-55 184 93.26 0.98876404494382 1 noncoding 0 0 0 0 -0.284460747238754 0.277543984154509 0.0192779720490489 0.674503662832536 AAAATAAATCACCTTTAAGGATAGATTTGGTTTTGATTATTTTAAGGGGAAAGGCTATGTTATTTGAGCAAGTATAGTCTAGGGGCTTTATATAAATTGCTCATCAGTATATCCATTTGCTCTTTGGCATATTTATTGAGTACCTACTATAATTTAGAAACTAAGGAGATACCAGTGAATACAGATCAAGTAACCTGCTCTCATGATACTTATTCTCTAGAGGGAGAGACACATAATAAGTTAAGTTCATATAAAAATAACAGTACCATTTTATATATTGATAATGGCTCTGAAGAAATTTTAGCAGGAGGAAGGGGTATAGAGAGACCAAAGTGCTGGGGAGGGTGGAGGAATGGGCTCTGGCTAACCAGAGTGGAGGGGAGGACAGGGAGGGGACCAGCTGGAAGGCCAGCGAAGCTGGAGCACAGTGAACAGAACGGTGGACGTTCAGGTGGAGAAGACAAGCTGAGCGAGTTCCCTGAGGGCCTCGTAGACCAAGGTTGTTCCTGCTGAAGGACTGGTCTCTATATTGAAGAAGAGGAATGATAGTGTAGGAGATCGTCCTGCCCAGATGCAGCAGAAACCATCCAAGCGAAGAGTGAGGTTCCAAGAAATAGACGACAGCCTAGATCAAGATGAAGTTGGAGGTGGCTCCTGTATTTTACTGGTCTTGCTGTGCATAGTGACGGTTTTGCTTAGTGTGGGAGGAACTGCGTTATACTGCACTTTTGGTGACATGGGGTCACCCGTTTGTACAGACTTCGCAGACAACGTGGACTTCTATTACACTAAGTTACTACAGGGAATAGCAGAACTTAAACACTGGATCTACCTCTCCTAGCAAGCATTCAAGAGGGACAGGCATGCTGGCAGTGAGAATCAAAGAGTGAACCTTTCTCAGCAGCTTTTATTTCAGGAGTTCCGTAACATGCGCCCTCACCTCCCCCACCCCGCTCCCCAGAGGAACAACAAACATCAGAAACAGCAACTGTAAATGGCAATCCAGAGGAACTCTCAGAATAATCACACCATGAAGCGATATTGATCTGAGCACTGTGGGTGGATGGCATGGTCTTTGGACAGCGTGTCCACCTCCTCCTCACTGCCTCCCAGTGTAGTGAGCTGCACTGAGCAGAATTAGACAGGGCAGTGTTGGAGCCAAACCACTTTTGGCTACCTTCAAGCTAATGGTTGACTTCCCTGGTGGCTCAGATGGTAAAGCGTCTGCCTACAATGCAGGAGACCCGGGTTGAATCCCTGGGTCGGGAAGATCTCCTGGAGAAGGAAATAGCAACCCACTCCAGTACCCTTGCCTGGAAAATCCGATGGACGGAGAAGCCCGGTAGGCTACAGTCGCAAAGAGTCGGACGCGACTGAGCGACTTCACTTCACTTCACTAAGCTAATGGTTAAAGGACACTCTTGATTTACGATTGTTGGTCCAAAGACATTGCTTCCAGCCATCCCGCAATAAGTTTGTGTGTAATGAAAAGGAGTTTCCTTATGGTTTCAGTGTCTTTTTTAGTTCACTTTGGGAGCTATATAATTTAGGCTTTGTGCACTCTTTCCAGATTCTGTTTTCCACTTGCAAAATGGTTTTGTGTGTGTGTGTGTGTGTGTGTTTCAGACAGTTACCATAAGCAAAAACCCAACATAGAATAACAAAGATTATCCTTTCAACATGACTATAAATGTGCAGGCACAAAACTTTCAAGAAGGCATAACTGTGGAACAGATGAATTATAGAAGTCTTGGCCCTGAATTGAGAAACTGTGACAGATACAGTGACAGTTAACTTGGTTAACTAGCCAGAAGTTCATCACAGGCCTAGAGATAAAACTGAATAGCTTCCCCTGAGTCTCAGGCAACCAGTTTCATCATGGATTCAGTGCTTCCTGTAATGAATGCCGGATTCAGCTCAATTCAGTAAGACCTACTGAGCACCTATTATGTTCTGAGAATCTAAGACCCCTTCTACAAAGGTAAATAAGATACTAGTTCCTGCTCTAGATGTTTTGATTCTGGTCTTAGGTAAAATAAACTAATACTTTAATGAATGAAATTAAATCATCATATATAATTCAGTATTAACAGATCAGACACTCAGATGCTTGAATATGCATTCATATCATGGGCTTAATTCAGACCTAATATGGGGTCATTAGATGAAAATCCAATCATATCTTAAATAGACAAATGTCTGATTTTTATTTAAATCTGTCAGTTTTCCTTTTCTAAAGTACAGTGATCTAACAATTAGGAAGCCTTTCTTTAACCTTTTAATCTCATTGATAGCATTCTAAAAGAAACAAAACACATGAATTATAGTTTTTTAGCAATGATCATTATTTCATGTTTTTCAGTTAGAATCATTTGAAAGAAAAAGAGAATTTTCTTACTAGTTGTTACTGGCTGGTACAGTACATCCCTTCGTGTTTCAGCTTATTTATTTAGACTTATGATTTTTAAAAGGGCTTTTTATAGAAGTTGAAATTGTGTCATTTAGCACGCATTTGGTTATACCTGATATTTAATTACTGTATACTTAGTGTTGATTTTCTATAATTTCAACTCAGTGTGTTTTTAGGCTTATTTTTAAATTGATGTTTTATTTTTACTTACAATACTGTTTGACTTGTCTCTATCATGCCACCATAAACTATAATATTTTCAAGGATTATAGATCAAAGATATTTATTTAGAAGTGTACAAGATACTGAAATCTAGATTCCTTATACTTAAGGCTGATTTTATTAGAAGATTATTTTAATGTTCTATTATAAATTTTAAGAATTTGTATTCAACTTGTATGTAAATATATAAAATGTTGATGGTACTATCTTATGTGGTTCTGTAAGAGACATTCACAGAGTCTACTGTGTGGGTATCCCCAACATAGACGAACCTCTTCTGTTTTACCCTCATGATTTCTAGCTACAGAAATTTGGCAATGCTGATTTCTGCCGGTTTTATGTCAAGATAAGTCAAAATTTCCTTCCTGTTCCTTTTTTCGATCACTATTGAAGTTCTAAATACTCTGTAGTATTACATTGGCCACCAGGGCCATTGCTTCTGAAACTGAAGATTTCCCAGGTGCCTTCACACTGAGGGGAAAGATCTGAGACGACGCCTTGGTCCCTGGAGGCAGCTGCATCTCAGGAAAGCCAGGCTTGTCCTCACTGCGTCCCGTGGAGAGGGAGCTGAGCTCAAGAGCATACTGATGTCTTGATTTAAAATAGGCATGAAATCTCACCTAGAAAAACTAGGGCAGCTTTTTAAAATGTAATGGTCATTTATTGCATGAATTGGAGTAATTCCATCTGGTGATGAGAGAATTGTTATCTCTCACATAAAGAATTCATCCAGTTTGACTATCATGTAATTTTTTCCTGTCATTGGAAAGTACTGACAACGATTTGTAACTAATCTTCCTTAAAAACTGTATTTGGGGGTAACAGATCAAGCTTGTAATTTAAAATCTACACCAACAAAATGTCTCAGAGAGTTTATTTGAACCTCTTGGGTACTGAGAAAAACCGCTTTATTTAAAGTGAAAGTAAAGTAATTTCAGAAGTTGGTCTGGCCCCACAAGTAGGTTACTTTGGGTAGTCTAATAGGTTCCTACATAATGCTCCTGTGCTTCTAAAACATCTCCGCATCTGCC EMBV3_41141 ATCATTTCACACCATCTCTGGACTGATGACGAGGGCAGACGCAGGGGTATACTTGTCTGA Gene GeneID:520716|NLRP9:NM_001024664:175_cdna Constitutive 0 NULL GeneID:520716 18 GENE NLRP9 NALP9 NLR family, pyrin domain containing 9 EMBV3_12267 GCTCAAGCCTAGCCCTGTGAGTGAATTCCCAAATCTTGAGTACCCATCTATTCCAGGGCA Gene BVV0102_140748 - 1 EMBV3_43114 GK000014.2:45128998-45279166 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056354 1 XLOC_034157 NonCoding TCONS_00056354 XLOC_034157 NonCoding NonCoding - 14:45133301-45133824 - TSS42031 523 1 TCONS_00056354_1 79 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.48621388045309e-06 0.00102534623692175 0 0 0 0 0 0 0 0 0 0.000416711891645358 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0355586025138384 0.762136493658816 0.0206456050469025 0.685635888930336 GGCAAGCTGCAGATAGGTGGAGGGAGAGGAAAATACAAAGGGGTTGAGGATTCCTCACCCACATTGGTACCTACACAAGATATTTCTCCCATACTCAGTATTACTTTTCAGTCAAAAGTGAGGTCTGGATTAAAATCATCATTTCCAGTGTGCTGAGCTTTGACTCTGGCACACTGACCCCCCTCTCCCCTGGAGCACAGCTGCCTAGCCCCTAGGGAAAGGGCCTTTTCCAAGGCAGGGGTTTGGAGGAGGGGTGATGGGAGTGTTGTTCTTTTATAACTCGTGGCTCCGGCAGTACCAGCCTCTTCCAGGTTGCATGCAGGCTCATTCCTTGCCTAGTCTGAGTCTGGGTTTAGTTAGTTATTTGTGTCCTGCAGGTTGCCTTTCTCTGTGTTTTCTTGGGAAGAGATGCCCTGGAATAGATGGGTACTCAAGATTTGGGAATTCACTCACAGGGCTAGGCTTGAGCCAGGCTTCTTCAGAGATGAACTCCTGAGACCTCCAGAGGAAAAGAGCTCAGCCT TCONS_00053422 . 5' 4157 TCONS_00053422 . 5' 4157 EMBV3_39239 AAGGCCACCATTCAAGAAATTCAGCAAAGGGGGCGCCGGTGTGTGCTGAAAGACTGTTGC Variant GeneID:506441|DCTN5:NM_001024484:329_cdna 296^407 3 EMBV3_21837 GeneID:506441 25 GENE DCTN5 MGC3248 dynactin 5 (p25) EMBV3_21347 GGATGGACCAGCAGAGATGATGGAGCAATTTGAGTGTTTGGCTGAGGAGTTCGGATTCTG Gene BVT0102_090328 - 1 EMBV3_43044 GK000002.2:120397262-120465973 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13629 TCTCCGGCCACAAGCTCTCCTTCTTTTTTGATGGGACGAAGCTTTCAGGCAAGGAGCTGC Gene GeneID:505998|NFATC2IP:NM_001098883:257_cdna Constitutive 0 NULL GeneID:505998 25 GENE NFATC2IP MGC152369 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein EMBV3_23322 AGAGTTTCACCTTCTCTGTTGAGGAAATCAACCATGTGGCAAACATTCAGCCAGCCCCAG Gene GeneID:508026|OVOS2:NM_001164024:28_cdna Constitutive 0 NULL GeneID:508026 5 GENE OVOS2 OVOS ovostatin 2 EMBV3_10786 AGTAATCTTATTTTGAGTTCTACATAAGTAATTCAAGAAAACTACTTCAATATCAAAACC Gene GeneID:280956|VIP:NM_173970:2_cdna Constitutive 2 NULL GeneID:280956 9 GENE VIP MGC143128 vasoactive intestinal peptide EMBV3_04834 GGAACTGGAGCCCCATCTGAGGAATCTGGTCTCCTGGCTTTAACAGCAACTCAGAAGCAA Gene GeneID:787335|GPR179:XM_002695946:380_cdna Constitutive 0 NULL GeneID:787335 19 GENE GPR179 NULL G protein-coupled receptor 179 EMBV3_27873 TCGTGAAGCAGGTCACAGACGAGGAGCCCAGCTCCAACCACACGGTGATGATCCAGGAGA Gene GeneID:522282|ZFAT:XM_002692602:8_cdna Constitutive 0 NULL GeneID:522282 14 GENE ZFAT NULL zinc finger and AT hook domain containing EMBV3_08662 CTGAGGGAATCGTGTCGAAGATGTGGAATAAGAGCTCGAGCTCAGCACATTGTACCCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13737 GCGCAAAAAGAAAACATTATGTAAAGATCCAGAGGAAAACATTGAAAAGCTATAGAACAC Gene BVV0102_173009 + 1 EMBV3_07596 GK000025.2:19583437-19857599 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00073 GGCTACGTTTTCCAGATGGAGATGATTGTTCGAGCGAGACAGCTGAATTATACTATTGGC Gene GeneID:534097|DPM1:NM_001076013:1201_cdna Constitutive 1 NULL GeneID:534097 13 GENE DPM1 MGC140708 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit EMBV3_04498 CGGAAATCCAAGTAATGATTTGAAAGTGGCTTGGGGGCTTAAGAGGGATCGTGAGCGTGG Gene BVT0101_028135 + 0 NULL GK000009.2:39585150-39618704 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237092 TCONS_00237093 1 XLOC_144648 Coding TCONS_00237093 XLOC_144648 Coding Coding LOC539486 9:39612952-39627464 = TSS177339 7746 1 TCONS_00237093_3 569 0.177381874515879 4 0.466473709599614 0.000931918811456112 0.000297489899248293 0.000996684436774909 0.000405752278143247 0.000777668780002745 3.96559833477396e-05 0.000389862651951434 0.000329422354774888 0.00077177008603829 4.16772986608296e-08 0.000284956516756751 0.000198853683872128 4.60179849887975e-05 0.00020940814786404 0.000269590051743289 0.000149045079508833 0.000977260592674569 0.00119141560697695 0.000894308553374136 0.00094886985544636 0.000512006017497559 0.000310043377349962 0.000717674284277875 0.000914182740926513 0.000679633056614161 0.00134350024675232 0.000700207023979582 2.82856348237e-06 0.000219895373105086 0.000681387008488924 XM_003582604.2 KIAA1919 PREDICTED: Bos taurus KIAA1919 ortholog (KIAA1919), mRNA. 0.0 1.368e+04 99.99 0.97986057319907 NM_153369.2 KIAA1919 Homo sapiens KIAA1919 (KIAA1919), mRNA. 0.0 2421 82.60 0.30867544539117 TCONS_00237093_3 sp|Q5TF39|NAGT1_HUMAN NAGT1_HUMAN Sodium-dependent glucose transporter 1; 0.0 817 84.85 0.903339191564148 1 coding 0 1 1 1 0.774050692618381 0.0549277898909965 0.0155135719885353 0.848259860445934 GCGGTTGGCGAGAGGCCACATTTCCGCCACGTGATCTGCGCAGGCGCCTGCGTGAGGGAGGGCGTGCGGCCGCAGCCTGGGACGGCCGGCGCGTCCCAAAGTTCGACTCCTCCGCCCGGACTAGGGCCACCCCGGGGAGGTGGCGCCAGCCGGGACCGCAGGCTCTGGAGGCACGAGGCCCGGGCAGGGTGCCGAGTTCCCGAGGCTCCGCTGAGAAGCCGAGGGGTAGCGATACCGCTGCTCGGGAGCCGCCACGATGGAGCTGGAACTGGAACCCTGTGGGGCCGGGGCCCCGGCTGCCGGGCAGCGGCTTCTCCAGGCCGAGGCCCCGGCGGAGAATGAGCCGGAGGCAGTGGTGGGCTCCCGGAGGAGCGGCCGGGCAGACAGCATGCTGCGCTGGTTCATCACCGTCCTCCTGTGTGCCGCCTTCTTGGGGCTGGGGATGAGTGTTGCTATACTGGGACCCACGTTTCAAGACTTGGCAACGAATGTGAACCGCAACATCAGCCGTCTTTCTCTGATTTTTGTGGGCCGTGCCTTTGGATACCTGGGTGGCTCTGTGATTGGTGGAGTTCTTTTCGACAGTATGAATCATTTCCTCCTTTTGGGGGTGTCAATGTTCGCTACCACAGTTGGTCTTTATCTCGTTCCATTTTGTAAGACTGCAGTGTTACTGATCGTCATGATGTCCACCTTCGGTGTTTCAATTGGCATTCTGGATACAGGTGGTAACGTCCTAATCTTGGCTATTTGGGGGGACAAAGGAGCCCCGCACATGCAGGCCTTACACTTCAGCTTTGCCCTAGGTGCCTTTTTGGCTCCACTGCTGGCTAAATTGGCATTGGGCACGACGGTGTCTGCTGAAAACCGCACAGAGGCTGACTTTAACCAATCTGCCTTCAACCAGTCATCTGAAGCTGACTCAGAATCTCTATTTGGAATACCTGATGATATGAATTTGCTGTGGGCTTACGCTGTTATCGGTACTTATATTTTTGTAGTTGCTCTCTTTTTTTTCGCTCTGTTTTTAAAGAAAAGCTCAAAGCAAGAAAAAGCAAGAGTATCTGCTCAAAGGTTTCGAAGAGCCAAATACCACAATGCCCTTCTCTGTCTCCTTTTCCTGTTCTTCTTTTTTTATGTTGGAGCTGAGGTGACATATGGCTCTTACGTTTTCTCATTTGCAACCACCCATGCTGGCATGAAAGAAAGGGAAGCGGCCGGGTTGAACTCCATCTTCTGGGGGACCTTTGCAGCCTGCAGGGGCATGGCAATCTTTTTTGCTACATGTTTACAACCTGGAACCATGATTGTGCTGAGCAACATTGGCAGCCTGACTTCATCTTTATTTCTGGTGCTTTTCAACAAGAGCCCAGTTTGTCTTTGGATAGCGACTTCAGTGTATGGGGCCTCAATGGCAACCACGTTCCCCAGTGGAGTGTCTTGGATTGAGCAGTACACGACCATCCATGGGAAAGCTGCAGCATTTTTTGTAGTCGGTGCCGCCCTGGGAGAAATGGCTATTCCTGCAGTAATTGGAATTCTTCAAGGCAAATACCCTGATTTGCCTGTAGTTTTGTACACCTCTTTGGGGTCATCAATAGCCACTGCTATTTTATTTCCTGTGCTGTACAAATTAGCCACCTTGCCGCTTGATCGTCAGCGAAAAGAACACAGGAAAAGTGAGGACCAGAAAGCTCTGCTTTCTAGCTCTGGGCTCAATGACTATGAGGAAGAGAATGAAGAAGATGATGCAGAAAAATGGAATGAAATGGACTTTGAAGTGATTGAAATGAATGATACGATGAGGAATTCTGTAATAGAGACATCTAGAAATATTTTGATGGAGCCTACGGCTGAAGTCCCCAACCATTCCTACTCAAATGTGTTAATGTTTGAATCCTCTCCAGTTAATACTGGCAACTCCTCTGTGAATTACCTTGCAAGAAACCAGGACAAAAGGGACTGATGCTTTGAGAGGATGGATTATTTACTGACTGTTCAAATAATCACCAGTTCTAAGGAGGCCAGTCAGAGCAAAGCATAATATATTTGTAACAAGCTTTGAGGATCACAATTTCTAGGTCCGAGTATAGCAAATGCTAAAAAGTTTTGAAATGTTCTGTAATCCCCAGAGCCTTTCATAAAGAACCAGTGATCTCATACAGCAGGATCCTGTTGTGAGGCTAGTGTTTGGTGGCATGTGGCTGAGTAGGTGATATTTTATGGCCTTCACCCCTCCTCAGAGCATGCAGAGAAGGCATTTGTTTTTGAGAAGTTGGGTGTGCCATTCAGATAAAGCAAAACTGTTTAGTAGTTGAATCGGTTAGCCAAACAAATTCTCTGTCATCAGTATTCTGCCAGGGAAGTTGAGAATCGTTTCATAAAGAGACATCTTTGAAAATGGACAGAGATTTCTGTTAATTGTTTTACTCTGTAGTGTTGGATCAAAACATGGTAATTACTGATGTTTTCAGATTTTTATGAAGAGAGCAGAGAACAGGTGCTGGAGACCTGGCTTCAACCTCCACTGCTGCTTCCTAGTCTGGCCCTGTACTCAGTCATCTGACTTACGTAGGCCTTGTTTATCTCATCTCCTGGTCTGGGTCTCTAATGAAAGTGAGATGACTTTCAAATGGGAATCCCTCATTTTTACATTTTGTGCAAGGTGTCTGTCAGAAATGAACATAAGTGCCACTCCATTCGTCATTTCAAATGAGAAGTGGAAAAAAAATGAATAGCTTTAAGAATGTGCTACTGATTATGAATAACGTCAATGTAAGAGACTCAGTATTTAATACTTTATTTGAATAATTATGAGGAATACATTTTTAGCACTGTATGTCATTGATGCTGAGATGCACCTTTTTTTTTCACATTTTTAACATCTCTGAAATCAAAGTATGTGTTAAAATCAGTGATCATTTAATGTGACAAAATTGAGTTTTTTCCCATATACTTCTATAAAGTAATGTTGCATTTTACAATCAGTGTCTTAGTTTCAGTGAATACAGTGGTTCGTTCAATGATGGAGATTGTACTATTTTTACAGACATTTTAAGAAGAAGTTATTTTTATATGCTCATTTTCTCTGTGTTCACACAGGATTTGGAGATGCCTTGTTGCAGTTTTTAAAGCTGTTTCAGAGTTACTATGTTAGTAGTAGGGCTGTGAACGGGGTCTCTTGTGGTCCTTTGGTTACCTCAGTGACAATCTGGGAATGAGTCTGCTGTTCCAGGAGTTGCTCCTTATTGAGTCTAGTTGGTAGTCACGTTGTAAGCACTGTAAATTAGACTGCTCTTTTAATTAACCGTGAGACACAGTCTTTTCCAGCGATTGGAATACCTGTGTTAGGCCTCTGGACCTCCTTCTCCCTGAGTTTGAAATATCTCGGAAATCCAAGTAATGATTTGAAAGTGGCTTGGGGGCTTAAGAGGGATCGTGAGCATGGCAAATCTGGTGTGGGGTATCCTTTGATAAATGACTGGCATTGATGACAGATTTTGTTCTCTTCTTCTTAGCACATTTTGTGCTGAATAATACCTAATTTCTACTTGGTTGCGGTATGTCTACTTTTTAACTAATTTCTGTAAATTTGCCTTTGTTTTTTCATAAGTGGAAAATAGTACCTTTCTTGACTACTGTCCGTTATTGGTCATTTTAACAATCTGACAGTTTTGGAGAGAGCTGGTGGAGAAATTAACAGTGAAAAGCCTATTCTTCTTGCTTTCTTTATTCTATCCTTTTCTCTTAGCTGGAACTTGGAGATTAGGTCCACTCCACTTACTGCCCTTTCTCAGGTTGTTGGAATGTAGGCAGTAGCAACTATTTGGCATCCGGGCGGCTTGCCAGAATAGGGATTCAACCTGTGGCATCGACATTTAAAGGATAAAAGTGCAACTCAGAGAAATAAGGGAATAAGAACATGATAGAAAACTTGGAAATCCATGAAAAATGCATTAGAATTCCACAAACCAAAATGTGAATGGCCATATGAGATTATAGGGATTGTTAAAGTTTGATAATGTATTTCCATATTGGAAAGATAAGACAGTACAATTCCAGGAATTAGCCTTCATCCTGATAATCAGTTCTTAGTTAAATAAGTGTCTGCCGATACTCAAGTAACCAATACCGAAGTTTTCTATTTCTGAGTAACAAATTATTGTATCACAAATTTAACAGCTTAGAATAACAGACCTTTTATTTCTTTAACCTCACAGTTTTCTTGAGTCAAGAATTTGGGCATGACTTCACTGGGTTGGTTCTCTGCTCAGGATCTCATGGGCTGCAGTCAGGCTGTTGAAAGAGCTGTGCTTTGTAAAGCTTGGACTTCCCTTCTACGCTGTGTGGTTTTTGACAGTAATTCAGTTCCTTGAGGTAGTAGACGGAGATCTCCATTTTTTTTTTTTTTTCCTGGCTGTCAGCAGGCACCTGTCTCGATTGCTAGGCCCTCTCATAGATCCTTTCGAAGCATGGCAGCTTGTTTCTTCAAAGCCAGCAGGAGAATCTCACTGGAGCCAACTGAGCTGGGGTTTTAAATGATACCGTGTAATCATGGGAGTGACATCCTGTCCCTTTTGCCAGATTTTGTAGACTAGAAGGAAGTCTCAGAGTCTGTCCAAACTCTAGGGAAGAGGATAGTATATGGATGTATCTGATTACTGGGGGTCACCTTAGGGTGTGTCTGCTATACTCAAATGTCTGCAACACTCAAGGGAGCCAGAAAACTTTAGCTGGGGAAAAATCCTTCAGTAGTCACCAAAAGTGATAATAGATACAACCTACTGAATGTTCTAGTGCAGGAATGGAAAACTCCCTATAGACCAGGCCAATAAACCTGACTCAGAATTAGGCTTTTTCCCTTGAGATTTTAGGTTGTGCTCTTTTCCACTGTACTTTTAACCAGTTCAAATGCAGCTTAATATGAGGGAAATTCGTAAGTTTCGGTCTAATGGTATTTTCATAGTAAAGTCCAAGAAGACTTTGAGAGCATTTTTCAATCCCTGTTATTTTTTAAAGAAAAATCTTTAAAAAAAATAATTTTTTATTATATATGAAGGTATAAAAAAGGTCATGGTAGAAGATTAGGGAAGTACCTAAAATTTTTAAGGGGCAAATGTAATCATAATCCTAAATACCTAGAAAGTTCTTACATTTCTAGTCAGCTTAGTTTCCCAAGACAAGGGTAAAGGGGTAAAAAAAATTTCCTTCTTCCAGATAAAGTATCAGAAACAACTTGAATTTTATGTCTAGAATGTATTGATACTACATTTGGTGGACTGGTTTTTAGTTTGAATAGTTGTAATTTATTAAGAACAAAAAGAGAGTATCAACACACCCCTGAAAAATGTGAGACCCAGATTCCATGTAAAATGATTTTGTTTCAAGTAGATTTATTGAATAATCAGGATAGTTTTCTCATAACCAGAACTTTTGTATTATTATAGCAATGTAGCATTCAATCCTGCCACTTAAAAATTATTACTAAAATAGAGCTTAAAATTCTTAGTGAAAGTAGATACAGTCTTCTGGGGTCCCTTGTGTTTCTTGGGTGCCCTGGTTCATAATATGTATTCGTAATGTTTTGTTGTGAATGTGTGCGTGTGTATATGTCTGTATGTGGAGCCCACAGATGCTGTGTGTGTCTGATATTTTCTTATAGTGTGGGGATGTAGCGCAGGGGTAGAGGTGATAGGGAAGGGATACAGAAAAGCTTACTGTGTGATTTCAAAGTTTGTTACAATTGTTCTTTTAAGTTGAAATTTTTATGAAGGTTATTGTCGATTTACATGTAGTTGTGTGCAGTGTGTTTTTCAAACTTGCTGAGTGAAGAATACTTGCTCAGTCTGGAAAAATAGAGAAATAGATGGGTGCTTCTCATACTTTAATGTGCATTAGAATTGCGTCTTAAAATGCAGATTCTGATTTAGTTGGACTGGGTTAGGGACTGAGATTCTTCATTTCTAACAAGCTCCTAGGTGCTGTTGGCCCACGGGTCGACCACACTTTGGGTAGCAAGGTCCACTTTTTGGGAATGTTAAATTCTTTGCTGCTACTGTTGGGAATTTCATTTGTTTTCTTTTAGGTTTTCTAAATAAATCTAAATCTCTGGGAGTCTATAGTCCCCATGAACCCCCTCCATTTGTATACACTATTCTAAGACTGAGTTCTCTTCAGTCCTCTCCATTTGCTGCATTAGCTGTTGAATATTTATTTCACATGTTATCGAATGCCTCTTGTTTGGTAGTTTCTGTGGGAGATGTACACTGGTGAAAAATCAGAAATTTCCTGCCTTCATGGAACTTACCTCTAATGCAGTACTGTCCAGTATCTGCATTGGCCGGTGGCTGCCATATGTAGATAACACAGGTCCAGTGGGAGAAACAAAGCGTCAAACAAGTCATCACACAAGATATTTCCAGGAAGGCTTTATTTCCTGTTGTTCTAGAGATTGATTAACTACTATCTGGGGTCAGAAGGTTGTGATAGATACCTTGTTAAATGGCGTAATATAAATTATGGCATTTAAGAAAGACCTGGTGATCTAAAAGAGAAGGTGTTGGTTTTCTTGGGTATAAAAGAAGCAATCCAAAGCTGGTGATTTGGTTGTCAGAAGGAATATTAAAGCTCTCTCCTTTAATGCACTTTGGCCAGTTGGCACTTGAGCTAGGTTGAGCCTGAGTTGGATTTTTATTTAGGTTTAAATAGTCTCATATTTAATGATTTAAAACTGTACAGCACTGAATTTTTACAATCAAAGAGAATTGTTCTTTATTTTCCAACATTTTCCTGTGGTAATTGTAATTATGTCTTCTCTTGTCCTGTATTTCTGCCCTTTTTATTTCTTTTAATTCTTCAACAACAACAAGGAGGATCCCTTAGGTTCTTGCACTGTGACTATTGATTCTTATTATTGTCTCCTGTCTTCCTTTTGACTTATATTTTTAATTGCAGAATGCCTCAGTTTCTGATCTCTAAATTATTGCAGCTTGCCTTTGATGCATTTGGTAATGTTAGTAAATGGATGGCCTGGAGAAATGTTCTGAAGTTGTAAGATGACATGAGTAGCTTAAGGGGTTGGGCTTTCTAGCTTCTGAACAATTTATTGTGATTAATAAGGTGCTTTCTTTTTTTTTTTTTTAATCCTTTTTAGTTGTGATAAAATACGCATAACAAAATTTATCGTTTTAACCATTTTTAAGTGTACAGTTCAGTGGCATTAAGGGCATTATCATTATTGTGCTATAGTCATTGCCATCATCTGCAGAACATTTTTTATCTTGCAAAACTGAAACTCTCAAGCCATTGAACAGTAACTCGCCAATTCCACCCTCCTTCCAGCCCCTGACAACCATCGTTCTACTTTCTGTCTCTGAGTGTTTGACTGCTCTTAAGTACCTCATATAAGTGGATACAAACAGTATTTGTCCTTTTATGACCAGGTTATTTTATTTAGTGTAACATCCTCAAGGTCCATCTTACTGCAAAATGTGTCAGAATTTCCTTTGTAAAAATAAACAATACTCTGTTGTATGCATATTTTGTTTACCTATTTATATGTTGATGGGTACATGCTTTGCTTTCACCTTTTGGCAGTTGTGAATAATGCTGCTATGAACATTGATGTACAAATACCTGCTTTTTTAATTTTTAAATATTGAAGTATAGTTGATTTTACAATGTTGTTTGAAGTGTACGGCATAGTGATTCAGTTGTATGTGTATTATATAAATATGATATATATAA EMBV3_22319 AGGCCTGGAGACCATCTTCTACTCATCCTACGTCTTCTTCACCAAGCTTTCGGGAGCAGG Gene GeneID:539221|MFSD2B:XM_002691507:477_cdna Constitutive 1 NULL GeneID:539221 11 GENE MFSD2B NULL major facilitator superfamily domain containing 2B EMBV3_20696 AGATGAGTGATGGGAAGAAGGAAGAACTCCAGAAGGCACTCCAGGGTTTGGTGGGGTGGG Variant GeneID:613357|ERP29:NM_001076271:255_cdna 864^924 3 EMBV3_14780 GeneID:613357 17 GENE ERP29 MGC140608 endoplasmic reticulum protein 29 EMBV3_15576 TGCAGTGCGTCCTCCTGAAACTCTACCGTCTGGCTAAGGTCATGGAAAAGGACAGTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40289 ATAAAGCCCTCACTGATGCAGCAAAGGCCATAGCAGAGAAGCAAGCCAGGAAGGAGGCAA Gene GeneID:536917|GBP6:XM_002686263:80_cdna Constitutive 0 NULL GeneID:536917 3 GENE GBP6 NULL guanylate binding protein family, member 6 EMBV3_34646 CCCTTGTGTCATTACAGTGAAGTGCAACTCTTCCGTGGACAGTGCAGAGGGACAGAACGT Gene GeneID:506983|ZC3H8:NM_001075291:35_cdna Constitutive 3 NULL GeneID:506983 11 GENE ZC3H8 MGC140316 zinc finger CCCH-type containing 8 EMBV3_39766 AGCAACCCGGACCTCTCTGGAGACGAGAATGTTACCTTATATGAATGTCATTCACAAGGA Variant GeneID:404183|EED:NM_001040494:8_cdna 123^368 1 EMBV3_12361 GeneID:404183 29 GENE EED MGC128486 embryonic ectoderm development EMBV3_02333 CGCTACTTAGAGGACAGCCCAGCATCAGGAGAGAAGTTTGCTTACGTGCCATTTGGAGCT Gene GeneID:505060|CYP51A1:NM_001025319:10_cdna UTR3_Alt 2 NULL GeneID:505060 4 GENE CYP51A1 CYP51 cytochrome P450, family 51, subfamily A, polypeptide 1 EMBV3_00160 GAAGTAAACTGACTTACAAACTATATTAGTTCCAGGCCTACAGCAAAGTGATTCCATATT Gene BVT0102_260352 + 0 NULL GK000029.2:18913764-19088505 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31192 GTAAGCGTTACAGTGATGGCCCTAAACAAGAAGTGGAAAGTTGTTTGCCTGGGGTGTCTC Gene GeneID:790347|USP9X:XM_002700442:3_cdna Constitutive 0 NULL GeneID:790347 X GENE USP9X NULL ubiquitin specific peptidase 9, X-linked EMBV3_15796 GCCCTGCCTGCCTCCTGATCATACTGGCCAGCACACAATGTCAGACTCTTGTTCTTTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34007 GGCCAGCAGCCAATCACCTTCCTGCGACAGGCTCTTACAGTGCTAGCCAGGGCGTCAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18511 GCACACAGACACACAGAATTTATCTTTCAAACCCACTGAGGAAGACAGCTGGGGCTGCTG Gene BVV0102_221698 + 0 NULL GK000011.2:30963035-31110743 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07445 AAGCGCCGAGTAGTCACCAAAGCATATAAGGTCGGAAGTCCATGCGTCAATCTACAGCTG Variant GeneID:534883|VPS72:NM_001015658:127_cdna 328^442 1 EMBV3_26937 GeneID:534883 3 GENE VPS72 MGC134217 TCFL1 vacuolar protein sorting 72 homolog (S. cerevisiae) EMBV3_22459 AACCCCCTGGACCACACCAATGTCACGGCACCCCAAGCCTCCATGATGTTTCAGTATTTT Gene GeneID:509546|ERGIC3:NM_001034353:970_cdna Constitutive 0 NULL GeneID:509546 13 GENE ERGIC3 MGC127511 SDBCAG84 ERGIC and golgi 3 EMBV3_27195 GCTAAAAATGCAGATGGTTCTGTTGACTTGGGAACAAGGGGAGGGTCTAAGTCCTGGAGG Gene GeneID:538883|DEM1:NM_001081608:242_cdna Constitutive 0 NULL GeneID:538883 3 GENE DEM1 C1orf176 MGC148949 defects in morphology 1 homolog (S. cerevisiae) EMBV3_20036 ACGGAAAAAATACAGAACTGTTATACTGATTCCCGTACTTCTTCCATGACAGGAGTCAGA Gene GeneID:281507|STAR:NM_174189:17_cdna Constitutive 2 NULL GeneID:281507 27 GENE STAR MGC134013 steroidogenic acute regulatory protein EMBV3_32369 TACCTGTGGCTCCCACCTGGCTATGGTTTCCCTCTTCTATGGCACCATCATTGCTGTGTA Gene GeneID:510257|LOC510257:XM_002697875:417_cdna Constitutive 0 NULL GeneID:510257 25 GENE LOC510257 NULL similar to olfactory receptor, family 1, subfamily F, member 1 EMBV3_01760 GTACGTAACCTCAATGGTGCTGGGAGCAGGAAGTGGTGTGTTCAAGTGTGGAATAGCCGT Gene GeneID:281122|DPP4:NM_174039:46_cdna Constitutive 0 NULL GeneID:281122 2 GENE DPP4 CD26 DPPIV dipeptidyl-peptidase 4 EMBV3_06236 TTATTCCTTTTCTCTTATGAAAGACTAACTTACTTAAAATTATCATTGGATATGTCCGTC Gene GeneID:539781|CHMP5:NM_001034682:49_cdna Constitutive 1 NULL GeneID:539781 8 GENE CHMP5 MGC128530 chromatin modifying protein 5 EMBV3_30627 TTGCAGAGGTGTTCCCAGAATTGTTTGTGGCTTTCTGCGTGGGGTGTCAAGTGAGGAGGA Gene GeneID:507026|ICOS:NM_001034275:76_cdna Constitutive 0 NULL GeneID:507026 2 GENE ICOS NULL inducible T-cell co-stimulator EMBV3_02554 AGCCCATCTCCCTGAAAATCAACCAGTACATCGAGGTGCAGATCAGGAGCCAGGACAAGA Gene BVT0102_203819 + 0 NULL GK000012.2:15692471-15820184 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036268 TCONS_00036267 TCONS_00036266 1 XLOC_021119 Coding TCONS_00036266 XLOC_021119 Coding Coding FAM194B 12:15691282-15700187 j TSS26442 940 1 TCONS_00036266_2 201 5 0.894991015274034 0.000853519332349468 0.000879099002532884 0.00042218109244743 0.00134882240812167 0.000714314816099668 0.0003728885742554 0.000167506230709104 0.00091866908168521 0.00145212092709368 0.000175084484755701 9.00874828460189e-05 2.33659834546677e-05 0.000296026096563859 0.000100085350583761 4.68866077656602e-06 0.00604094704679453 0.00317917549685639 0.00413732780515372 0.000874864781466296 0.00197811957499095 0.000209917790662914 0.00143676813013795 0.0040404828406461 0.0024255229345616 0.00163621808686027 0.00154778346151089 0.000454408891151468 0.000470040295883296 0.000577016097019986 0.00125074744804254 XM_005194097.1 FAM194B PREDICTED: Bos taurus family with sequence similarity 194, member B (FAM194B), transcript variant X2, mRNA. 0.0 686 99.74 0.406382978723404 NM_182542.2 FAM194B Homo sapiens family with sequence similarity 194, member B (FAM194B), mRNA. 6e-86 322 78.99 0.398936170212766 TCONS_00036266_2 sp|Q5W0A0|F194B_HUMAN F194B_HUMAN Protein FAM194B; 5e-12 65.5 66.67 0.218905472636816 0 coding 0 0 0 0 -0.0784084049391138 0.501338870129953 -0.185795524580136 0.160021084524315 GGAAGAACACTTTCTCCAGGGAGAGGGGACAGCATGGCAAAGCCTTGAGGAGGTCAAAAGCACACATGACCCGGAACTGAAAGGAGCGACTGGGTTGAGCCTGAGCCAAAACCTGGGCTACTACTTCGCCAAAGATGAGTACCAGAAGGCCTGGAACTGGTGGGATCTCAGTCTCCACGTGCACGCGCCCCCCATCCAGCCCATCTCCCTGAAAATCAACCAGTACATCGAGGTGCAGATCAGGAGCCAGGACAAGATCATCTTCCACTTCACCCACCGCAAGAAGCACATTTGCTTAAACCTGGGCACCAAGTACAAGTACATCACCCTGGAGATGCTGAGCGAAATGAGAAAGAAATCAGTTCTGGAGATGGAAGTCAGTCCCACGGCTCAGAAGATCCAGATCCTTCTAGGGAAAATGAGTAGGATCCTGAGGCTGTTGACCATCCCCGACTTGGAAAACTTCATTTGGCGCTGGAGACAGAAGCTCCGGGGTCGATCTCAGCAGCAAATAAATCCTCCAGGCCTGCCCACATCTCAAAGCCCCGACATTTCTCCAACATGTGCCCTGGAAGCCGATGGTCCTGGTGGGGGTCTTGGCACCGCCACATGCCAGCTGTGCGACCTCAACCAACGCAGGGAGCCCCTCTGGGACTCCATTCCCTCCTCTGTAACAGGAGGACAACCACAGAACACAGCTCGCAGGCTGCAGATTCACAAGGCTGGCCCGCGGCACAGCCGCTGTGAATGTTCGGGACATAAAAAGTGCTCGCTTTTCAAAGAACTACGGAAATGGAAGGCAATGTGCAGAAAGCTGGTAACCCTAAGCATCGTGCATGCAACCTGCTATTCATCAGGCTTCCTGGCCGCCTCAGTGTGGCAGCCTAAAGATGCCCTAATTGGTACCTCCCCCTCACAAACACTGCCCACTGTACCATGA EMBV3_32963 CCCCCTGCTGTTGTGGTACTCCAGCAAGAGGAAATCCAGGTGCTTTCCAGACTCCAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32057 CGTCTGCCGTGGGGCTGGCGTGTGATATTTGGTGGTGTGTGTTCTTATGTGTTTGTTGGT Gene BVT0102_215340 + 0 NULL GK000029.2:17887918-17893258 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164565 TCONS_00163211 TCONS_00164567 TCONS_00164566 TCONS_00163212 TCONS_00164564 TCONS_00163213 2 XLOC_100260 XLOC_099824 Coding TCONS_00163213 XLOC_099824 Coding Coding GAB2 29:17700774-17893154 j TSS122351 3802 1 TCONS_00163213_2 567 8 0.980278512727481 0.000346711552843907 4.06474782897663e-10 9.94716795214686e-08 0.000865632483399429 0.0017527375626494 1.0232945102474e-20 0.000823445041868009 7.94457342101618e-12 0.00102706661256005 1.15958744087313e-09 0.000742310964632538 0.000214678931072097 3.20014606158702e-10 0.000633200117456754 0.000523038878026473 0.00148043703174283 0.000621775534748036 0.000404957554406707 0.00245760414100246 0.00148835965606227 0.00144389977740613 0.00094050419833169 0.00030801093514344 0.000335420734914229 0.00190323499423218 0.000697379540548164 1.35001591255966e-07 0.000153418947977471 4.97338010042596e-08 1.2556405139934e-08 XM_002699070.2 GAB2 PREDICTED: Bos taurus GRB2-associated binding protein 2 (GAB2), 0.0 2940 100.00 0.42845870594424 NM_080491.2 GAB2 Homo sapiens GRB2-associated binding protein 2 (GAB2), transcript 0.0 2017 87.42 0.42845870594424 TCONS_00163213_2 sp|Q9UQC2|GAB2_HUMAN GAB2_HUMAN GRB2-associated-binding protein 2; 0.0 951 91.67 0.908289241622575 1 coding 1 1 1 1 -0.190940554864729 0.613496691197814 -0.0204030084248746 0.815465046675524 CTGAGGAAATCGCCCCCCGAGAAGAAGTTGAGGCGCTATGCCTGGAAGAAGCGCTGGTTTATCCTGCGGAGCGGCCGGATGAGCGGTGACCCCGACGTCCTGGAATACTACAAGAACGATCACTCCAAGAAGCCCCTGCGCATCATCAACCTGAACTTCTGCGAGCAGGTGGATGCAGGCCTGACCTTCAACAAGAAGGAGCTGCAGGACAGCTTCGTGTTCGACATCAAGACCAGCGAGCGCACCTTCTACCTGGTGGCCGAGACGGAGGAGGACATGAATAAGTGGGTCCAGAGCATCTGCCAGATCTGCGGCTTCAACCAGGCAGAAGAGAGCACAGACTCCCTGCGGAACATCTCCTCGGCCCCGCACGGGCCGCGCTCCTCTCCAGCGGAGCTCAGCAGCTCCAGCCAGCACCTTCTCCGAGAGCGGAAAGCCTCGGCCCCGTCGCACTCCAGCCAGCCGACCCTGTTCACCTTCGAGCCCGCGCTGTCCAACCACGTGCAGCCCGCCCTGTCCGCCAGCGCGCCTCAGGAGTACCTCTATCTGCACCAGTGCATCAGCCGCAGGGCGGAGAGCACACGGAGTGCCAGCTTCTCTCAGGGCTCCAGGGCCTCGTTCCTCATGAGGAGCGACACAGCCGTGCAGAAACTTGCCCAGGGCAACGGGCACTGTGTCAACGGGGTCGGTGGTCAAGTCCACGGCTTCTACAGCCTCCCGAAGCCAAGCCGGCACAACACAGAGTTCAGAGACAGTGCCTACGACCTCCCCAGGAGCCTGGCCGCCCACGGCCACACCAAGGGCAGCCTCACCGGCTCCGAGACAGACAACGAGGATGTGTATACCTTCAAGACGCCCAGCAGCACCCTGTGCCGGGAGTTTGGGGACCTCCTGGTGGACAACGTGGACGTTCCGACCACCCCGCTCTCGGCCTACCAGATCCCTAGGACGTTCACGCTGGACAAGAACCACAACGCCATGGCAGTGGCCACGCCTGGGGACTCGGCCATAGCTCCCCCGCCCCGGCCCCCCAAGCCGAGTCAGGCAGACACACCTCGATGGGGCAGCCCTCAGCAGAGACCTCCCACCGGGGAAGGCAGCAGATCGGTCTCTGCCGCCGCCACCATCCCCAGGCGTAACACCCTCCCAGCCATGGACAACAGCCGGCTTCACCGAGCTTCCTCCTGCGAGTCCTACGACTACCCGCAGCGTGGTGGAGACAGTGCCGGCCGGTCTGCCGAGTCCATGAGCGATGCAGTCAGCGCTTTCCTGCCAGCGAAAGCAGTCGTGGGTCGATCAGACAGCACCAATTCCGAGGACAACTACGTGCCCATGAACCCAGGCTCCTCCACCCTGCTGGCTTTGGAGCGAGCCGGTGATAACTCCCAGAGTGTCTACATCCCCATGAGCCCCGGGCCGCACCACTTTGACCCGCTCGGCTACCCCTCCTCAGCCCTCTCTCTGCACCGAGGCTCCAGCAGAGGGAGTGAGATCCAGCCACCCCCTGTCAACCGCAACCTCAAACCTGACCGGAAGGCAAAGCCAACACCACTTGACCTGAGAAACAACACCGTCATCGATGAGCTCCCCTTCAAGTCCCCCATCACCAGGTCTTGGTCCAGGGCCATCCCTCTGAGGGAGCTCCGGAAGCTGGAAGCAGAGCACGGGGCAGGAGGGAAGTCGGTGTGTCCTTCCCCTCTCCGTCCGTCCGTCCGTCCGTCCGTCCTGCGCACGGCGAGCGTCAGAGGCTGCGCACAGGAGCACCAAGCTGCCGCCTTCTGAAACCCACTGACCTCTTCGGGGGACCAGTGGGCCGTCTGCCGTGGGGCTGGCGTGTGATATTTGGTGGTGTGTGTTCTTATGTGTTTGTTGGTTACACGTGTCTTGAAATGTAGAATCATTTTCCACGGAATCATTGCTTTATCAAGAAGAGAAAATGGGCTGGAAGAAGCCTGGTCTTAGGTTTCTGGCCCTGTTACCATTTAAAATTGACATTTAATTTTTCAAATCGCTGTTGGTGCCTAATCACTTAAGTTATTAATTTATTGTTTTCTTTAAAAAAAAATGTAACATGTATTTATCCTGTAAGTAGGTCTGGGGTGGGATGGGAATGCGTTCACAGGCGTCCTGTTTTTGCGGTGGTGGCACAGGCCTGGAGCTTGCAGGGCCCTTGTTACTGGAGGCGGAGCTAGATGACAATAAAGTCCATGAGAAGAAAGCAGAGAGGCTGCGGCGTCTGCCTCGTCCGGGGGGCGGGCGGCGGGCTTCACAGGACAGCGGTCCTCGGCCAGATGGTCCGCCCCCATCCCCGGCCACTCCACCTTCCGCTCAACAGGAGCCAACTGGGGACCTTTCCTGGCTGTAAGAACAAGTGCGAATCCCCCTTACCTTGGAATCTGTATTCCTGGTGTGTGAAATGGAAGTAATAGCAACCTCTGTCCGCTCATCTTTCTTAAAAGGCGCACTGGACCACAGAGGTGAGTTCTGAGTATGACCTTTCGGTCTCTGACAGACCCGTCAGCCCACCTGCGCTGGTCCGAGTCTCGGGGCTCTGTGGGCTTTGGGGCCAAAGCTCAGCTCTTCCACTGTAGCCCAGGAAGCCCCCGGCCAGGCCGTCACTGTGCCAGGTTCCCAGATGGGCAGGCCCTGAGGGCTGCAGGCTGCTTTGCTCCTGGCCTGAGCCCACTCACCCAGGTTCTCCGGGGTAAGAAAGGAGAGTGGGAGCAGCCGCGAGCTCCAGGCATCCAGGAGCTGATAGATGAATCCGTCTACAGCGTCCTGTCTGGGTGGCCCCAGCCTGTGCACCCATCCCTCCAGAGTCAACCCCCCCTAATCTGGGCACATCCCGGCCACCAGGCCTCACATTTACACAGCACTTCTGTGCAGGGCACACTCACCTCCCTGGTGCAGCATGCAGGTCGGCAGGGCAAGGGGGTGTCCCTGCCTTCCTGCCCAGAGACCGCGAGAAGCCATGGCTAGAGCGGGAAGAATGACAGCTTTGAAGGCTTCAGAGAACCTCTTTTTATTCCTGTTTGACACTCTGGTTCTCTCCGCTCCGTTTAGAAAGGGTACAGCAGTGTCAGGGCACAACGCGGGCAGTATCTGCTCCCCACCAGCCCCGGGGACCGTGACCAACAGCTGAGGCGCTGAGCCAGCCAGCGTCCCTCAGGACAGACGTCGTGAGACACACACACACACACACACACACACACCTGCAGTAAAATAAGGACTCTCTCTCGTACCCAGAAGGGGGCATTCTCAGGCACTGAGGCAGGAGAGGGGGCTAAGCGGCCGTCCTTCCCCTCTGCATTGCTCGCGGGGAGGGGGCGGGGGTGCCTCTCTAATCCCGCGCCAGCCTGCTTCCCACCTGCACGCCTCACAAGAGGACAGCGTCGGCACCCACACACACCGCCTCAGTCCCCTCGGAGAAGCAAGATGCGGCCGGAGGGGCGACATGCAGCCCCTTGTTTATGCTGGGGCTGGGACCCTCCTCAGGTCTGTGCTATAGACACACAGGATTGTCGTCTGAAAGGAGCTGGACGGGAACTGCTACTTGATGGCAAACACGGGGCAGGAGCTGAGGCCCAGGGAGTGTCCATCTCGGCTTCTCCAAGCTGACCACAACTCTCAGGTGCAAGTCTTAAGGGGGCTGATCCCAGCGTGGGGGCCCGAGGGCAGTTTAAGGGGCTCGGGTCTCACCTCCGCCTCTGAGTCTCTCTGCCTGCCAGGCTGAGGTCGGCAGCCCCTGCTCCATCGCTCTCGCCCTTGGAAGGGGCTGCCTCCATGGCCTCCCCCAGACCCC EMBV3_27559 TTCCTGAACCAAGGATGAAACCTGTGTCCCCTGCATTGGCAGGCAGACTCCTATTCAATG Gene BVT0102_205614 - 1 EMBV3_10610 GK000009.2:55194771-56339758 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20754 ACTGCACCAAGATTGCTACCATCGCTCACCCGCTCTCGTTCTGGTTGAAGATGAAGATCT Gene GeneID:664649|TAS2R1:NM_001046636:38_cdna Constitutive 0 NULL GeneID:664649 20 GENE TAS2R1 T2R1 taste receptor, type 2, member 1 EMBV3_32013 AAGTGTAATACCAGCTGATCCCATCTGCCCAGTGACTACTTCCCTCCACACGTGGGTATA Gene BVV0102_403678 + 0 NULL GK000023.2:15941570-15948555 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09597 ATCCGATATCCAACTATCCTAGGCATCCAGGGGGCTTCCTACGCACACATACAGGCATGT Gene BVT0102_093973 - 1 EMBV3_24084 GK000006.2:118025127-118129539 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36783 ATGTGGCCTTAAAGCACTTCTCCCGCTTCTTCCTGCTCCACTCCCACGAGCATAACAAGA Gene GeneID:526555|FTHL19:XM_002700216:161_cdna Constitutive 0 NULL GeneID:526555 X GENE FTHL19 NULL ferritin, heavy polypeptide-like 19 EMBV3_02122 GGTTCTGAGCCTTTAGGCGGAACCAAGTTGAAGACAGAGTCTAGGGTAAATACACAGTGC Gene BVV0102_064394 - 1 EMBV3_27742 GK000022.2:56958163-56965858 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127570 TCONS_00127567 TCONS_00127566 TCONS_00127569 TCONS_00127571 1 XLOC_077677 Coding TCONS_00127567 XLOC_077677 Coding Coding MBD4 22:56948961-56960022 = TSS95383 4031 1 TCONS_00127567_3 554 0.28826593897296 8 0.63625678119349 1.50949956365721e-12 7.30853335809306e-09 0.000684579292098965 4.264841359043e-07 0.000458293861159566 0.000230650774134127 7.20648373569996e-09 0.000404329837658442 0.000135251475463834 4.45594275032147e-05 1.31708015961839e-05 7.68756037548488e-05 5.97503518525624e-05 5.10582206740442e-05 1.5531580184166e-10 0.000337028389169416 7.3201708633729e-09 0.000312317233805582 0.00102880759973504 0.00105459786571634 0.000303843717149679 0.000241521445176238 0.000526163478640307 0.000351046942250066 1.43364194865643e-09 0.000675360706755009 0.000269149375928179 2.67210667562043e-05 5.31611427821819e-30 5.52827274266433e-24 XM_005223058.1 MBD4 PREDICTED: Bos taurus methyl-CpG binding domain protein 4 (MBD4), 0.0 5241 99.93 0.721905234433143 NM_003925.2 MBD4 Homo sapiens methyl-CpG binding domain protein 4 (MBD4), transcript 0.0 1914 78.03 0.560406846936244 TCONS_00127567_3 sp|O95243|MBD4_HUMAN MBD4_HUMAN Methyl-CpG-binding domain protein 4; 0.0 779 72.70 0.998194945848375 1 coding 0 1 1 1 0.0845176264522961 0.516367234017469 0.02196277277458 0.702286718735428 GTCCGCGATTGGTCGGAACGGTGCGTCTTCCTTGACGAAGGATTTGATTGGCTGAGCTGCGGAAATAGCGGCTGCGGTCGAGGGGGCGGCCGGAAAGCTGCTGAGGAATCGGAAAGACTTGCACTGCATTCATCTGTTGGTTCCAGCCTAGCGCTCCGAACTGAAGAAATTTTCACCTCTTACTCCGCCGCACACCCAGAGCGACGCCCCCTCTCGCCCTGTTGCTGCCGCCGGAGCCCACTTGAGAGGCACGTCTAGGATGGAGAGTCCGAGCCTGAGGGACTGCGGAGCTGCCCCCTCGGTCGTCGACCGTGAGCGCCTAGTCCCAGACCGGCTGTGTGACCTCCGGGAGGAAGATGTTGCTCTGGGGTCAGAAAGAGTGGGAGAGGATGAAAAGCAAATGGTGATGAAAAGCAGCAGTGAATGTAATCTCCCTCTACAAGAGCCTTTTGCTTCTGCTCAATCTGGTGGGAACGCAATGACAGAGTGCCGAAAGTCTGTACCATGTGGATGGGAAAGAGTTGTGAAGCAAAGGTTATCTGGGAAAACAGCAGGCAAATACGACGTACATTTTATCAGCCCACAGGGACAGAAGTTCAGATCCAGAGTTTCACTTGTTAATTATCTTCACCAAAGTGGAGAGACTTCTCTTAAGCCAGAAGACTTTGATTTCAGTGTATGTCCTGAAAGAAGCATCAAGTCAGAATGTAAAGGCCGAAACACAGCAGCTCTGACATTCCAACTGCAACACCAAAGTAACAGTTCAAACCGGAACCTCAGGACACGGAGCATGAGGAAGAAAGATGTATTTCCCCTGCCAAGTGCTTGTTTGGAATTGCAGGATAGCGGAGAACTACCCAACTTGAAAGAAGATGAGGGTGTTCATGATATTGCCTCCAGAAAGGTTAGCAAGTCCAAAAGAAAGGTGACTGTTTTGAAAGAGATTCAAACTAAGAAAACAAAACCAGGGTGCCGCAAGAGTCTTCCTGATCCTGTCCAAAGTAATAGAGAATCTCAAAGTGAACCTGTTGCACAGGAAAGTCACCTTGAGGGAACTTGCTGCATCTCTGATGCCAGAGCCAGCGAACAGGCCCTCAGTGTGACCACTGAAGAGGAGAGGCTTGGTAAAAAAAAATCATCGTGTTTGGGACCAAACGGTGAACAGATCCCTTCTGGCATTGTAAGCAAATTATGTTCGGCCAAAGAAGTGGAACCCAACAATAAGTGTGAGGACCCCCTTTTAGAATCTGAGGAAATAAGAACCAAAGTAGAAGCTGCGGAGAGGAAGGAGCATTTGCATATGGACATTTCAGAAGGTGGCTCTGAAACAGACGACAGCTCACAAACACAGAAAAACCCTACGTCTGCGAAAGTATCTCAAGAAGACACCGTCCCACGGACACAAATAGAAAAAAGGAAAACAAGCCTGTATTTTTCCAGCAAATACAACAAAGAAGCTCTTAGCCCCCCACGACGCAAGGCCTTTAAGAAGTGGACACCTCCGCGGTCACCTTTTAATCTCGTCCAGGAAACTCTTTTTCATGATCCGTGGAAGCTCCTCATTGCAACTATATTTCTCAATAGGACCTCAGGCAAAATGGCCATCCCTGTGCTCTGGCAGTTTCTGGAGAAGTACCCTTCTGCTGAGGCTGCAAGGACCGCAGACTGGAGAGATGTTTCAGAATTTCTTAAACCTCTTGGTCTCTACGATCTTCGAGCAAAAACCATTATCAAGTTCTCCGATGAATATCTGACAAAGCAGTGGAAGTATCCGATCGAGCTTCACGGGATTGGCAAATATGGCAACGACTCGTACCGAATTTTTTGCGTCAATGAGTGGAAGCAGGTACACCCTGAAGACCATAAGTTAAATAAATATCATGACTGGCTTTGGGAAAATCACGAGAAATTAAGTCTATCTTAAAAACTCTTTGAAGTTTTCAGACTTGTTTTTTCTACATCGCTTTGCACTTTGATTCTTCAGAGCTCCATTAAGCACAACCACCTTTCCAGGCGTATAGATTTTAATCAGCCCAGCTACTACCAGCCTACTGTATGTTTTCTTAATGTGCGTACCACTGGTAGATCTTTGCTACTGAATGTGCTGGAACATGTTTTAAGAGTTTTTTGGTTTTTGTTTTAAGAAAAAATAAATTGTTATTTGACAACAATCCTAAAAATGTAAATGTATATGACTTTCCAATAATGAAATGTGATTTGAAGTTGGAAAAAACTCTCCTTAGTTACCGACAATATAAAGCAAATTTCTATCAACCTTATTTGAGGGAAGATTAGACGTTCTGCTCTCTTTCTGTAGAAAATGATACCATTGCTGTTTAGTCGCTAAGTTGTGTCCAACTCTGTGCAACCCTGTCTGACTGTAGGTCACCAGGCTCCTCTGTCCGTGGGGATTCTCCAGGCAGGAACACTGCAGTGGGTTGCCATTGCCTCCTCTAGGGAATCTTACTGACCCAGGGAGTGAGCCTGCGTCTCCTGTGTTGGTGGGTGGATTCTTTACCACTGAGCCACTAGGGAAGCCCTATTAATAAAAATATTTTTATTAAAAAACACCTTCTGTGAGGATGATCTGGCTGTGTCATCTGTCACCTCACTGACTGCTGGGGTTGATTTCACTGATTGGTTGGTTAGGCAAGCTGCACGTTCAGCTGAAGAGGACAACCTTCTCCAATCGAGGAGGACCGTTCTTTGATCAAGGATATATGAGTACCTGCACTCCCCTGCTAGGACCTCCAGACAAGCTCTCAAGGTCCATTTGTAGGAGAACATAGTGTATTCAAGCTTCCAAGACTCCAGACACATCCCCAAAAAAACGCCAACCCCCAAGGAAAAATAAGATTATTTTGTCATCGTGTGTGTGTGTGTTTATAGGCCCTTTCTTTCTATTCTTTTTTTTTTTTTTTTTTTTTACTGTACCAGGTCTTAGTTGCAGTATGTGGGATCTAGTTGCCCAACCAGGTATCAAACCCAGGCCCCCTTCATTGGGAGCACAGAGTCTTAGCCACCGGGGAAGTCCCTGTCATTATGTGTTCTTAAGGACTCTTGGTTGACTTTTAGGAATTGGAGATTTGACCCCGGCATCCATTTGATAACCTAGTGTGAATACCTGCCTGCAATTATGTTTCAGAGTCTTGGTTTCTGACTCATGTGTTCACTGTGATCCCCATGTGAAAACTCAAGCATTTACCCATCTCTCATCTTCCAGCTGGAGGACAGGACCTTTTTAGTTTTATGCCTTTTTTAATACAGGTATTATCATGGTATAACCCAAATACTAAAACATTTACTTTAGAAGGAACTCATAAATGAAAATCTAAGTTATCAAGCCTCAATTATCACTCATTTTAAGATGAGAGGGTAACAGACAAGGAGGCCAGGGGTTTCCAAACTGAGGAAATAGGCTGCAAGTGTCAGACATTTTTTATCTCTCTCTTAAGTGGCGGGAGGAAACAAACAAGTGTTAAGAAGCGGCGGGAGGAAACAAGTGTTAAGATTTTTCCCCTTCTCTATACAAATTTAAAAAGAGGTTTCTCTTAAAATTCTGTGTTGCCATAATGACACCTGGTTCCACCTGAACTGAACTTTTCTCAAATGCACTTTTCTTGCACTAACCGATGCGTTTTTCTTACGGATATATTTGTCTGGAGCTATGTTAATGCACTGTGTATTTACCCTAGACTCTGTCTTCAACTTGGTTCCGCCTAAAGGCTCAGAACCCACTTGACAAACCAGTATGTTATACATTGTTCTCCTAATCTATGTTAATGAAACTGTATATTTGCTTGGAAATCTGCCTTCAAGATTCATGTCAGTGGTTTTATAGCCTGAGATGACTCACCTGGTGCCAATGTTATCTCAAAATGCATGCTGTGGGTGAGGGGCCTGGTGCCATTCTCTGAGTCTGAGACATTTCCTTTCTCTAATTAGCAGACTGCTAGTAGCTATATAACATCCAGCTAAAGACTAGCGGGGGGGCACTCTTTCTGCCCCCTTCTGATGTCTATGTCAGAAGC EMBV3_01297 ATGGCTCCACTGAACCGCCCAGCTCCTGTGGAAGTCACATACAGGAACATGAGATTTCTT Gene GeneID:516634|LOC516634:XM_002699038:60_cdna Constitutive 0 NULL GeneID:516634 29 GENE LOC516634 NULL similar to protein tyrosine phosphatase type IVA, member 1 EMBV3_26677 CTGAGCCGTCTAAATCTGCTCCGGCTCCTAAAAAAGGCTCTAAGAAAGCCATCACTAAGG Gene GeneID:525512|LOC525512:XM_002697525:258_cdna Constitutive 0 NULL GeneID:525512 23 GENE LOC525512 NULL similar to Hist1h2bj protein EMBV3_20749 CGAGGTCAACGGGCAGTTCGAGTCGGTGTGTGAGTCGGTCTTCAGCGAAGTGGAGTCTCA Gene GeneID:784511|DLGAP2:XM_002696761:425_cdna Constitutive 0 NULL GeneID:784511 21 GENE DLGAP2 NULL discs, large (Drosophila) homolog-associated protein 2 EMBV3_19312 ATGGGGCTGAAGAAAAGCTAGAGGATGACATGTACCGGAAGACTTGTACTGTGTGTGGCC Gene GeneID:537958|XPA:NM_001038681:35_cdna Constitutive 0 NULL GeneID:537958 8 GENE XPA MGC134264 xeroderma pigmentosum, complementation group A EMBV3_00392 ACTCAGTGTGACAAAGCCTTCCGACACAGCTCTTCACTCAGCGTGCACAAGAGGATTCAC Gene GeneID:789635|ZNF333:XM_002688732:7_cdna Constitutive 0 NULL GeneID:789635 7 GENE ZNF333 NULL zinc finger protein 333 EMBV3_07433 ACCTGTATCAGACTTAACGCTTAAAAGAAGAATTTGGAGGTGTCTGCTTACTATTTTCTG Variant GeneID:783019|DIRC2:NM_001101287:110_cdna 534^799 3 EMBV3_39720 GeneID:783019 1 GENE DIRC2 NULL disrupted in renal carcinoma 2 EMBV3_08338 TCAACGTCATGAGAGACACCAAGACCCGGAGGGATGTGACCCCGGAAATCCAGTTTTTGA Gene GeneID:537324|CDH7:XM_002697668:142_cdna Constitutive 0 NULL GeneID:537324 24 GENE CDH7 NULL cadherin 7, type 2 EMBV3_19014 GAACGTACAGTGCAGTGGTGGTTTAAGAAGTTTGCCTCATCCGCCACATTCACCTGACCT Variant GeneID:534913|SETMAR:NM_001083726:33_cdna 293^924 1 EMBV3_17838 GeneID:534913 1 GENE SETMAR MGC151518 SET domain and mariner transposase fusion gene EMBV3_02830 TGAGACTTGGAATTGAATGATGCCCTGGAGGGTGGTCAGTAGAGAGCAAAACACCTTCCC Gene BVV0102_138453 + 1 EMBV3_31190 GK000021.2:13422064-13573053 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29517 AAGACTCACAATGAGCACTTGGCTGGGGTGCTGAAAGACTACTCTGATATTGCTCCTGGC Gene GeneID:510921|GTF2E2:NM_001046065:13_cdna Constitutive 1 NULL GeneID:510921 27 GENE GTF2E2 MGC127990 general transcription factor IIE, polypeptide 2, beta 34kDa EMBV3_19963 AGTACAGAACGCTGTGCCGAGAAGAAGGCCAAAAGGGGTTTGTGCGCCCAGCCTGAGGGT Gene BVT0102_098546 + 0 NULL GK000010.2:100816800-100981352 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023508 1 XLOC_014175 NonCoding TCONS_00023508 XLOC_014175 NonCoding NonCoding - 10:100969035-100970771 - TSS17398 1736 2 TCONS_00023508_4 130 1 0 0.000156747611437451 3.4729513372158e-05 0.000245209330899834 0.000148288698790471 6.8255933921015e-05 0 0.000178041926269734 0.000214646542764659 0 0 0 0 6.61125267783577e-06 0 2.54353855244733e-05 0 0 4.33598453582181e-05 6.60915264488764e-05 0.000368685665367005 3.4973827747592e-06 0 4.22767336446864e-05 0.000511822184207833 5.98659751966886e-05 7.71105323735629e-05 9.78775183138274e-05 6.63952409049588e-05 2.79643414756111e-06 0 NM_001034047.1 RPS3 Bos taurus ribosomal protein S3 (RPS3), mRNA. 2e-102 378 72.10 0.408986175115207 NM_001005.4 RPS3 Homo sapiens ribosomal protein S3 (RPS3), transcript variant 1, 3e-80 304 70.37 0.388824884792627 0 noncoding ACAAACCCGCCGTCCTCGCCTGAGACGCCCTTCGCTCCCAGCAGCCCTTGCGGCAAAATGGCGGCGCGGCGCTGCAGGAAGAGGCAGCCTGTGGCGGGCGCGGCGCCCTCAGAGCCCAACCGAGGGCGTCTCAAAGACGGGTGCCCCGGGGCTGAGGCCTGAGTCACACACCAAGCAGGACCGAGGTCACCCTCCTGGCCGCGAAGAAACGGGATGTTCTCGGTGAGAAGGGCCGGTGGGGGCCTGTGGCTGCGAGCCGTGTGCGTGGTTCCGAAGAGACCTGGCTTCTCCGAGGGCAGTACAGAACGCTGTGCCGAGAAGAAGGCCAAAAGGGGTCTGTGCGCCCAGCCTGAGGGTCTGCGTTCCCTCCTGGAAGGCCTTGCTGTGCTGCGGGTCACCTGGAGAGCGGGGCCGGAGGCTGCAAGCTCGCCGTGTCTGGGAGGACTCTGAGGACAGAGGGCTAAAGCCACCGTGAAGTCTGTGGATGGCCTGACGGTCCGTAGTGGGGGCCCCTCACTTCCTGTATTGACAGCGCCGGGCACCCCGCGCCCCTCAGACAGGGTGTGCTGGGCATGGAGGGAAGGGTCACGCCGGCCTTAGGGCCCGGCTGGTAAAACTGGCCCAGACAGCCCGTGCCCGGTCACAGGAGCACTGTGGAACCCAAAGGTGACTGGAAGCCACCATCACCCTCATCTTGGAACCAGAGGGGTGGGAAGGCAGAGAGCCGCCTGCCACACCCCAGCCGGGTACCCACACTAGCATAGGGTCTCCTTGGCCGCCGGATCTGGAGTCTGCATATTGCCTTATGAAGACCTTCAATAAAATCTTTTTAACAAGTCAAAAAGAGAGAGAGATGATGATGGTTCAAACTAAGAAGTTTCATTTAGAAGAAGGGGGGAAAAAATGTTTACGTGTGCAAGAAAGAAAGACGCCTTTTATTTTCTCTAAAAATCAGTCACATTTCAGTTTCAAGATCCATCCTACCAGGAATGTGGAAAATGTCTCCTTGGGTTGCTGGTCTGGGCTAGGATCCTGGGCACCTCCCCCCACCACCCCCACCCCGCACCTGCGTGGCGCACCCCCGGCCCTTCTGGCAGGGCTGCCCCAGGGTGCCTCTGCTGAAGCCTGTCTCATCCCCTCTATGCGACTCCAAACTGTTCGGTCCCCAACCTAAGAAAATGTCTTTTGACTCGGGAAAACCTCATTCCCAAGCCTGCGCTGAATTAAAGTCCTCCCATGGGTGTGACTTTTGAAACAAAGAAGCCAGGAATCCTGTGGCCATTGTATTCCTCGGCTTGAGAAAAGGAGGCTAGAACCTGGGAGCCCCAGGAGATGAGACAGAGCGGGGGGAGACAGGGGAGAAGGCAGAGAAGCTGCTTTATCTACCGTGTGTTCCTCAGACACACTTGCTTTCAGAAGGAGTTACAATTCCTGTTGCAATTGGTGGTGACCTATAGCGCTTACCTTCTGCTCATCTTTAACTTTATCTTCGAGTTTGTGGTTTATTTCAGAAAATGTAATAAAGCAGTCCCAAGTGAAGACTCATTTGTGGTGTCCTCAGGAGAAACGGATTCATATGCTTGGGAGTCATTCCTGTTCTCCTGTTCCCTAACCAGTCTACTAAGCCTTCTTAAAGATGCCACTTCTTACAGGAAGCCTGTTTTGACTGTCACCGTGTGTGTGCCAGTCCTCACACTGTCTGAATTCCTAGCACTTTGGGGGTAATTTCTTGTACT TCONS_00018506 . 3' 10582 TCONS_00018506 . 3' 12317 EMBV3_15587 AAACGGTAGTTTCGTCACCCTGTTTTCCTGACTAGAAAAGTTTGAGCACGCAAAGACCTC Gene BVV0101_003075 + 0 NULL GK000007.2:35858618-35981841 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220232 1 XLOC_133549 NonCoding TCONS_00220232 XLOC_133549 NonCoding NonCoding - 7:35974848-35977225 - TSS164230 2377 2 TCONS_00220232_4 106 0.959612957509466 1 0 0 0 3.89315079557367e-07 0 2.30784443790899e-07 0 2.04449137400731e-07 0 0 3.46192256282161e-06 2.98547432432204e-05 1.35385705465472e-05 0 1.9789637613828e-06 2.76791417161261e-05 0.000688904253013519 7.69132579104697e-06 0.000232225286170435 0 0 0 0.000181068078650679 0.000410394240184466 0.000741431515936489 0 0 0 3.0306589705649e-05 5.71851446768881e-05 4.04695276240515e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1025 83.83 0.382835506941523 0 noncoding 0 0 0 0 -0.141220052366349 0.503209971300436 0.0340086207883391 0.611356720464386 CAATGTTTTAAAGGCAATTTTACTAGACTGAACCATAAAGGACAGGAACAGTACAAAATGTAAAGAGGTCTTTGCGTGCTCAAACTTTTCTAGTCAGGAAAACAGGGTGACGAAACTACCGTTAAAAACATGAGATTCTTTTTTAGAAAAAGAATGACTTCAGTTCAGTTCAGTCATGTCCGATTCTTTGTGACCCCATGGACCACAGCACGTCAGGCTTCCCTGTCCATCACCAACTCCTGGAGCCTATTCAAAGTCATGTCCATCATGTTGGTGATGCCATCCAACAATCTCATCCTCTGTTGTCCCTTCTCCTCCCACCTTCAATCTTTCCCAGCATCAGGATATTTTCCAATGAGTTGGTTCTTCGCATCAGGTAGCCAAAGTATTGGATTTTCAGCTTCAGCATCAATCCTTCCAATGAATATTCAGGACTGATTTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAACCATCAATTCTTTGGTGCTCAGCTTTCTTTATAGTCCAACTCTCATACTGGAAAAACCAAAGCTTTCACTAGACAGACCTTTCTTGGGAAAGTAATGTCTCTGCTTTTTAATATGCTGTCTAGGTTTGTCATAGCTTTTCTTCCAAGGAGCAAACATCTTTTAAATTTATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCCCCAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACTGGATGCCATGATCTTAGTTTTCTTAATGTTGAGTTTTAAGCCAACATTTTTACTCTCCTCTTTCACTTTCATCAAGAGGCTCTTCAGTTCTTCTTTACCTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGCATATGCCATGATCTTAGTTTTCTTAATGTTGAGTTTTAAGCCAACTTTTTTACTCTCCTCTTTCACTTTCATCGAGAGGCTCTTCAATTCTTCTTTACCTTCTGCCATAAGGGTGGTGTCATCTGCATATTTGGTGGTGTCATCTGCATATGAGGTTATTGATATTTCTCCCAGCAATCTTGATTCCAGGTTGCTTCATCCAGCCTGGCATTTTACATGATGTACTCTGCATAGAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGATGTACTCCTTTCCCAATCTGAAACCAGTCTGTTGTTGCATGTCCCATTCTAACTGTTGCTTCTTGACCAGCATACAGATTTCTCAGGAGGCAGATCATCTCTTTCAGAATTTTCCACAGTTTATTATGATCCACATTCAAAGGCTCTGGTGTAGTCAATAAAGCAGAAGTGGACGTTTTTCTGGAACTCGCTTTTTCGATGACCCAGAGGATGTTGGCAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAAACAAGCTTGAATATCTGGAAGTCATGGTTCACATACTGTTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTGCTAGCGTGTGAGATGAGTGCAATTGTGCAGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTAGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCCACTGCCATTCTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGTATCATCTTTTAAGATCTGAAGTAGCTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTCAGAGTGATGCTTCCTAAGGCCCACTTGACTTCGCATTCCAGGATGTCTAGCTCCAGGTGAGTGATCAAACCATCGTGGTTATGTGGGTCATGATCTTTTTTGTATAGTTCTTCTGTGTATTCTTGCTTGCTGCTTCAAGATGCAAAGGAATAGGATGGGGAGACCACTTTCTCCCGCACAAATTCATCAAAAGATCATTTGAATGCTGAGCAACTTCCACAAAACAACTTCTGAACACTGGCGGAGGATATCAGGCACCCAGAAAGGCACCACATTCTCTTCAAAAGGAGGTAGGACAAAATTTAAAAGACAAAAAGAGAGACAAAAGAGTTAGGGACAGAGACCTGTCCTGGGGAGGTGTCGTGAAGGAGAAGTTTCCATACGGTAGGAAACCCTGTCACAGGTAGGTCTGTGGGGAGTTTTGGAATCTCAAGAGGGCAACATAACTGGGAGAGAAAACAAAACAAAACAAAACCACAGAATGCATGCCTAACCGCAACTGCAGAAAAGAGAACTTTCCCGTGAAAGGCTCTAACCTAAAAACCTAAGGCACAGCTGGCCTGCTCACAGAACAAAGGACTGAGTGGATACCAAAGGAGAGCCAGCTGGCTGCATACCAGCCTCTCCCTGCCCAGAGGCAGAGAG TCONS_00216457 TCONS_00216446 TCONS_00216447 TCONS_00216448 TCONS_00216449 TCONS_00216450 TCONS_00216451 TCONS_00216452 TCONS_00216453 TCONS_00216454 TCONS_00216455 TCONS_00216456 TCONS_00216458 TCONS_00216459 TCONS_00216460 . 3' 4267 TCONS_00216457 TCONS_00216446 TCONS_00216447 TCONS_00216448 TCONS_00216449 TCONS_00216450 TCONS_00216451 TCONS_00216452 TCONS_00216453 TCONS_00216454 TCONS_00216455 TCONS_00216456 TCONS_00216458 TCONS_00216459 TCONS_00216460 . 3' 6643 EMBV3_23594 AATCTTCTTCAGTGGAAGCTATGAAAGGGGTCCATGCAACAGACTGGGAGGACTGGAGGC Gene BVT0102_379229 + 1 EMBV3_32705 GK000011.2:60598441-60654633 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032034 1 XLOC_018279 NonCoding TCONS_00032034 XLOC_018279 NonCoding NonCoding - 11:60613063-60613539 - TSS23033 476 0.17436974789916 1 0 0 2.11100844969706e-05 0 0 0 0 0 0 0 8.64385661019022e-06 0 0 0 0 0 0.000388406022334196 0.00195320908487749 0 0 0 0 0 0.000173458881109881 0 0 0 0 6.05368244812427e-05 5.09937705905976e-05 0 0 noncoding 0 0 0 0 0.0228415984193435 0.845644290532173 0.0236410209788055 0.757409332097771 GATTTAAAATTTACTTCCTATAAACCAGAAATTAAGTCTAGAACCTTTACTGGCTCAGATTAAAATTTTGTCTAGAATACGAACATTCTTTTGAACCTAAATTCCTACAGAGATTTCATTCTAACAACTAACTAGTTAGCTGTTTGTTTCCCCACCTTTCTTCTGTGTATCTCCACTGACTTGTCACCCTAAACTCAGACATCACTCTCTTAGGGATGCTGCCTCCAGTCCTCCCAGTCTGTTGCATGGACCCCTTTCATAGCTTCCACTGAAGAAGATTGTAATTGCCTGTGAGTGTACCTAGGTGTCCTACCAATCAATGAACTTCTTATAGCCCACTACCCTGTCTTCCCCAGTCCCTACTTGACTTTCACCTCCTTGATACCTGCCCATCCTTCAGTCCTCAGATCAAATGGTATACCCGCTATGGAAGATTTCCCCATTATACAGAGCTATAATTTTCTGTGTTTTTTCTC TCONS_00025067 TCONS_00025070 TCONS_00025071 . 3' 14619 TCONS_00025067 TCONS_00025070 TCONS_00025071 . 3' 15094 EMBV3_20450 TTCAAAGACCTGGAGATTTGGTCTGGATAAATGCAGGCACTGTGCACTGGGTTCAGGCTG Gene GeneID:100271759|UTY:XM_002700446:73_cdna Constitutive 0 NULL GeneID:100271759 X GENE UTY NULL ubiquitously transcribed tetratricopeptide repeat gene, Y-linked EMBV3_27871 GTTGGAGGAGAGGGGGACATTGACCAGCCACTGCAGCAGCCTCACCAGCAGCCAATATAG Gene GeneID:785028|LOC785028:XM_002686418:375_cdna Constitutive 0 NULL GeneID:785028 3 GENE LOC785028 NULL similar to Uncharacterized protein C1orf190 homolog EMBV3_02357 GGTGACCTCCATCCTCGGCCCTCTGGGCACTATCACTGGGATTAATTACTTGTGACTATT Gene GeneID:533177|SCARB2:NM_001102153:86_cdna UTR3_Alt 2 NULL GeneID:533177 6 GENE SCARB2 MGC140207 scavenger receptor class B, member 2 EMBV3_42132 CACCATTTCTTCCTGTACACCTACTCCGTTCTCAGTTTGCCATCACCCGTGCTACAAGTC Gene BVT0102_159684 + 0 NULL GK000007.2:65004836-65025010 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213961 TCONS_00213964 TCONS_00213957 TCONS_00213959 TCONS_00213962 TCONS_00213965 TCONS_00213956 TCONS_00213963 TCONS_00213958 1 XLOC_130583 Coding TCONS_00213965 XLOC_130583 Coding Coding G3BP1 7:64987581-65015901 j TSS160161 12655 1 TCONS_00213965_2 465 0.018016594231529 12 0.553550619725273 2.65430110093462e-06 2.28893471971788e-17 1.03523941332232e-58 6.0704341937567e-38 0.000416116432603664 6.06977426707602e-06 1.41675650657716e-27 0.00024660315705831 1.99789817236093e-06 1.09962050281391e-08 0.000184393665314145 2.47953473946931e-05 9.56223682656915e-67 0.000107776481999852 0.000248244447060533 0.00232688237738933 2.02890284270845e-07 0.00289215117663793 0.000452460304006981 0.000721038543230707 2.77300020096282e-20 0.00339778705653398 0.0014274649217698 0.00279772554254477 0.000168857035386932 6.62130455358046e-07 9.62706677786088e-63 6.44467197298383e-08 0.000392612178853658 0.00076390733368316 XM_005209646.1 G3BP1 PREDICTED: Bos taurus GTPase activating protein (SH3 domain) binding protein 1 (G3BP1), transcript variant X2, mRNA. 0.0 4901 100.00 0.214618727775583 NM_005754.2 G3BP1 Homo sapiens GTPase activating protein (SH3 domain) binding protein 1 (G3BP1), transcript variant 1, mRNA. 0.0 3306 87.34 0.212564203871987 TCONS_00213965_2 sp|Q32LC7|G3BP1_BOVIN G3BP1_BOVIN Ras GTPase-activating protein-binding protein 1; 0.0 939 100.00 0.997849462365591 3 coding 0 0 0 0 -0.150018752796601 0.41760208915481 -0.0222668487966587 0.660626242389234 CCTGGAGGATTTTCATCATTTTGCGTGAGAAGATTGAATGTGGTTGAATTGACCAAAGCAATGGTTATGGAGAAGCCTAGTCCCCTGCTGGTCGGGCGGGAATTTGTGAGACAGTATTACACACTGTTGAACCAGGCCCCAGACATGCTACACAGGTTTTATGGAAAGAACTCTTCTTATGTCCATGGGGGATTGGATTCAAATGGAAAGCCAGCAGATGCTGTCTATGGACAGAAAGAAATCCATAGGAAAGTGATGTCACAAAACTTCACCAATTGCCACACTAAGATCCGCCACGTTGATGCTCATGCTACTCTGAATGACGGTGTGGTGGTCCAGGTGATGGGCTTGCTCTCTAATAACAACCAGGCTTTGAGGAGATTCATGCAGACCTTTGTCCTTGCTCCTGAGGGCTCTGTTGCAAATAAGTTCTATGTTCACAATGATATCTTCAGATACCAAGATGAGGTCTTTGGTGGCTTTATCACTGAACCTCAGGAGGAATCTGAAGAAGAAGTAGAGGAGCCTGAAGAAAGACAGCAGACACCTGAGGTGGTACCTGATGATTCTGGAACTTTTTATGATCAAACTGTCAGCAATGACTTAGAAGAACATTTAGAAGAACCTGTTGCTGAACCAGAGCCTGAACCGGAACCAGAACCAGAGCAGGAACCTGTATCTGAAGTCCAGGAGGAAAAGTCTGAGCCAGTCTTGGAAGAAACTGCTCCTGAGGATGTTCAGAAGAGTTCTTCTCCAGCACCAGCAGACATAGCCCAGACAGTGCAGGAGGACTTGAGAACCTTTTCTTGGGCATCTGTGACCAGTAAGAACCTTCCACCCAGTGGAGCTGTTCCAGTTACTGGGATACCCCCACATGTTGTTAAAGTACCAGCTTCACAGCCTCGCCCGGAGTCTAAGCCTGAATCTCAGATTCCACTTCAGAGGCCTCAGAGGGATCAGAGGGTGCGAGAACAGCGAATAAATGTTCCTCCCCAGAGGGGACCCAGACCAGTCCGTGAAGCTGGTGAGCAAGGCGATGTGGAACCCCGAAGAATTGTGAGACACCCTGACAGTCACCAGCTCTTCATTGGCAACCTGCCTCATGAGGTGGATAAATCAGAGCTTAAAGACTTTTTTCAAAATTATGGGAATGTGGTAGAACTGCGTATTAACAGTGGTGGGAAATTACCCAATTTTGGGTTTGTTGTGTTTGATGATTCTGAGCCTGTTCAGAAGGTGCTTAGCAACAGGCCCATCATGTTCAGAGGAGAGGTCCGTCTGAACGTGGAAGAAAAGAAGACTCGAGCTGCCCGTGAAGGGGACCGCCGGGATAACCGCCTGCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGGTGGCATGAGAGGCCCACCTCGTGGAGGCATGGTGCAGAAACCAGGATTTGGAGTGGGCAGGAGCATTGCTCCAAGGCAGTGAATTGCTCTTCACCAGTCTTCAGGCAGCAGTACAAACTAGCTCCCACAGAATGATGAATTTCTTCAGCCAACCTTGGTATCTTGGAATATGATCCTAGTCTATCATAAACTGCTTAAGTTTGTACAATTTTACTTTTTGTGTTAATGGTGTGTGCTCCTTCTCTCCCCTGCCCCCCACCTTTTAGTCCGTCACTTCCAATTTTGTGGAATATTTTAGGAAAAATGGATTTTTAAAGAAGAAAAAAAAGACTGAATTTCTTTGCTTTATTTGCATATACAGACTGGATTTTTTTTTTTTTAACAGTTTCCCCAAAGGAATGTGTCTTGCTTCTTACTGACATTTGGTATGTTTCATTCATTGGACTATTTCTTACTTACTTTCTATGTATTTCAAAAGCCTGTGAGAACTACAGGATTTGATAAACATTTTGAAGACCGGAGAAACCCAAATTGTTTTCCTCTTTGAGAGTCATGACTATCTTCTGGTGTGGAGAAATTGCCATTGGAAAAATTGACAATTTTGATTCTCGTTGATGTGGTTAAAAACTGAATAAAAGGTGTTCGAGTTTTCTTTTAAAACATGATCACAAAACAGTTCTAAAATCTACTGTTTTTGACATTGGAATTTAAGTTGTGAGATAGGTTTAAATGTCTAGAATGCAACTGATAAGCTTTTCTTGAACTGTTTTTTTTTGAAGTAGAGTTTTTTTCATGTTTAATTTGTATTTGTAAAAAAAGAAAAAAGAACAAAAAAAATTTCCAAATCTAAGTAACACAAAACCAGAGCAAAACTGTTGTGCCTTCTATTTATCTTTGATTCCAGTCTTGGCAATTGTTTAAAGAAAATAATAATAAAAAAAAAAAAGACCCCTAGATTTGTTCTATCAGGTTCAGAGTATGTTGGGAATTATGACCCCATTTTTTACTCTGTATGTCTTGTGTTCATTTGTTATGCCTTATTCTGAAATTGAGTTTCAAACTGGAATGCCTTTGAGTACAGATGCTTCTGTAGAGTCCTTTGACCTGAATAGTTCAGCATTTGTATTAAGTTTTATTTCAGTGTCTATTCAGAATCCTAATCATAGCCCGTAAGAAAGAATGTGACATTAATGTTGGACTTTGATGGTGTGCTTGAGTGAGTGCTAGGTTTTTTTTTTTCTTTTAATCATAGCCATATGGTAAATTTTCTGTTTTGTTATGGTTCCCTTTCCCTGGTGGGCATGCAGTGGGTATTTCTTGGAAATGGCCAATTTTTATTAAAACGTTTCTGGAAGATCTGGCGATATAGACTAATACTCGTTTTGCATGGTGTGTGTTGAGTGCTGTGTGTGAGATGGGTGAAGGCTTTGTTCACACATTTGTGTAGCAAGCCTTTGTGTGATAACTTGTCACTACCAATTGAAGGGCAATGAGGTTGTCAACTTAAACTTATTTTTTTTTTAACAGTGTTCATCTTTAAGACTATTGTTTGAGGCTAGTATATTAGTAGGAATAGGAATGTTTTGCTGTACTGGGAAACTAGGTTTACTGAAGGGCGTAATGTTAAATGAAGTTTTTGATGTTATCAGTTGGTCCTTAGTACCACAAATATTTGAAAATTGGCAACATCTCCTTCATATATAACAACATAAAAAAACTTACATAACTGAATCCCATAGCTGGTTTTTGGGTCAGTTTAAACAACTAGTTGGTAACCACTTCATTTGGCCCAGAATTAGAAGAAATTCAGCTTGTACTTTTGTAGCTTATATTAAGCTTGTAGTAGAAAAGAAAATTTAGCCTGAGTTATTTTTGAGGAAAAAAATTAAGTTGCAGTAACTATTAGGTGATAAAATATAGATAACCTAGAAATCATTTTTCATAAGTGAATACTAAACCATACATTTCTAAATGTTTTTCCTCCTCAGAGCAGAGCTTTAAGGGCACTAACTAAATACAGTGTTTCTCAACTTGGGGCTATTGTTATATCCTAGAGGACATGCACAAATTTGTGGGGTTTTTTGGTGGGGAGGCGGGTGGAGGGAGATGCATGCCCTGCATCTGGTGTTTGGTGAATGGGGGCCAGTGATGCCAAAATGCTCTTGGAAAATGAAGCAACCCCACTGAGAACACAGGGAGTCCTTACTCCTGTAATTCATGGTGGGTAGAATGGTGGAGTAGGACAACTGGAGTGAAGACTCATTCGTTTGAAATAGAGTCTCAGAAAAATAGCAACTAGAAATCTCTCAGGAATTATAGTAACAACTACTGTAAGTAATTAATCCCAACTTTATTTGTACCAATTGTGTGTGTATTGTGTTTTAATTTGGAGAGGTAGCAATATACTATATGCTGCTTGTAATTTATTGCAGGGAATTCCTGCATAATTTCCCAAAAGGTTGCTTCAGTAATTTCAAGTTACCATAATTGGGATATTGTGGTGGTTTGACTTGCATTGGACTTTATAAATAGGATTCAGCACCCTGGTTAACACTCTTAAGTATCTAGCTATCACTGATAACATTTACTGCTGATGTAATAAACATGTTACCCTAGGTACACATCTATTCACATATTTCACAGTTAGTGAAAATAAAATAGATGAGGGCAAGATTTTCTGTAGGGAGCATCACCTCATCACATTCAACTTAATTTTTTGTCTGTTGGAATGGCCCAACATGTAATTCTTTTCTCCTGAGCTTAAAACCCTTCACACATGAACATTTTAGCTAAGGTACACTAGTTTGGTTCAGTAGATCTCAGTCTTTTAAGACCTGTTGAAAATAAATAGACCTTTGGCTGTACAAAAATACTTTTGTTTGCTTTATATTGAGGGCCGTTTTGTGTTTTCCTGTGTTCTCAACATTTTGAGTTATTGCTGCGAAGTGGTGAAATGGATAATGCAAGAATAATTGTTTGGTTTTGGATCAGTAGGTTACTACCACCATGTTAGTTGAATTGCACTTTAGTTTTAGGTTAGACAACTAAATTTTTCACAGCTATACCCTGTGAATTAGGTGTTATTCCCCTCCCAAAGTAGTAGGTGAAGAAAGTACATCACGAACCTCCATGTAGTAGGAGCAGATTGGCCTCCAAAACTGATGCTTTTTTTCTAGAACCATAGTGCCTACCTGTATTTACATTTGAATACCATTAAGGGAATAGGGCATGAAATAACTACAGTGTAGAGACTTGAGTCTGCAAAACTTTCAGGTCAAGACTAGCATTACCATTTTCTATTCCCATGAGGGTAAAGTAGTTAAACATTAATTTTGTAGGGCTTCTTTTTATTTGCAGACTGTATTGTAACACATTGCTATTGAATTACTAGATTATTTTCTCATCTGGTTTGGTAATACATTTAGTACAATTTAATCTGGATGTGGAAGACAATATTTTTAGCATCATCCAGGTTAGTTGAGTTGTGTTTTTTGCTTATAACTGCCATCCTCTGATACTTTTCTTCATCCCTCTATTTGAGAAACCTGGTAGAGTTAGTGATTTAGTGGAGAACGTGGCACTTTATAGATACCGTTTGTTAGAATATATGAAAATTTCTTTCTATGAAGTTTAAATTTGTAGTCCATTGTTTCTCTTGTGGCTTATTTTAGGTAAGTTGTTTGCATTTGTCAAATCTACTGATCTATAAAAATAATTTTTATATTAAAGCTTTATTTTTGTGCTACTTAAAAGAATCTCTGTAGGAGCTGTATACAGATTACACAGTTGTTGAACTTGTAGTTGAGCAATTTTGAATCTTGTAAAAGAAGCAACTTCAACATTTATTTGAATATGGAGTTCTAGCTAAGTGCCTAATGTACCACACATTGGCAGTGGACAATTAGGGGTAGTCTTTTGCAAATGTTAGAAACCTTAAAGCATGTGTTAGAAACTTAGCAATACTTTATGTGGGATGGGTTGTAGGTTAAAGTTGCTTGTCATGTTGTACTAGGTCATTAAATGAGGACTTCTGGTTTTAGGGTAGTAATACCTTTTGGAATTTGTGTTTACTGTAATATCAAGGTTCTGGGGACCATAGATGGGCTTGTGAACTTACTAGACTGAATTAAAGATACAGTGGCACATGTGAGATAAAACTTTGATTTTTATTATTTTTAGTGGATATGTATCTAACTCTGAATGATGCTGAAATTAGATTGCTTTGCTCATGAGTTCATGCAGCAGTCTTTAATAATGGCCTGAATGAGTGAAAGGTTGATTAAAGGTGGCCTACAACCCTTAACCAGTTTTACTTTTGATCATGCTTATGTATTGGCTTAGAATCAAAGTTGTTGTCTTTTGATTGCATAACTTTCGAAGTCTCTCCTCTTCAGTTTCCACTCAAACCTGGTAACCCCCAGTGAGAAGAATATAGTATTGGAAATCAGTTCTCTTGTTACTTCCATAAACCATGTGACCTGGTCAGTTACAGAAATCTATGCAGGGTTATTACTTTGAAATGTGTCCAATGTCACAGATTCCTAAGGGACTTGTATCCATTCAGTGTGTCTTTGTGTGTTTTTTTTTTTAAAGTAAGTGATGCTTACCCAAAAATTCACTATTGAAGTACTTTAGCAAGTATTTATTTTTCAGAAACCCACTTGTGGGAAGTTTTCCTGTATTTTTGGTAGTAATTAGAGGGATGATTATATCATTTAATATGGATATAGTTTTAACTATTGCTGTAATTAACCACTTTGGTTACTGATACTCTCCCTAAGTTTTGTTGTCACCTGTTTGGGTTTGGTTTAGATTCTTAAATTTTTTATGAGGAGTGTATGTACAATGATTTGGCCCTTTTAAATGAAGACGTAAGGAATTAGGGAAGAAGGGACTTCATTTAAAGATTCAGTTTACAATTTAAGTAGACTATGTAGAACATACATTGTGTTAAAAATAAATTTGCATAGGTATCTACATTGGTTTTCAAGAAGAGTGGGATAGGGGTGGAATTTAGCTGATGGAATATGAATAATTTATGGTTTATATTAAAAGAAAGTCATAATTTTAAGTGAGAAACTATTTCTATAAAGTGTCCCCCCCCCCCCCCCCCCCGTACTGATGATTATCACAAGAAACAGGAGGAGACTCCTAGATTTCTTAGAATATCAGTGCTGGAAAGGACTAAGGTGATTTGTATAACCCTTGCAATTTTCAAAAGGTGGATGACTCGGATGACTAGTACAGCACATTCAGGAGTTTCCAGTCCTGCCGTGTGTTTGCTTTAGTAAGCCAAAGCTGTTGAAAGGTAGGATGTGGGGAGGAAAGGGAAGGAGCCACACTGTGTGCTTATCCAGTTGCTTCATTAGCTCAGTTTTCATACCCACGTTTTTTGTTTTCTTCCAACTGTTTTAATGCCCCGTTCCAGGGCCTTTTGTCAATAAGGACATTAACTTGTGTTCCCCTCAGGGATGGGTTTACTACTAGCCGTCAGAAAGCTATTGGGTATCCTAATGTGTTAATAGCTGAAACTCAGCTGTAATTTTCTCCTAAACCCGTCAGCAGTTTGCATTCTGTACATTGTGGTGCTTTCCCCACCTTGTATTGTTACAACTGTAAGCTCCTAAGGGGCAGCAATTTGGTCTTAGCCATATACCCGGTTCAGTGCCTGGCAGCACCATGTTTGAATCAGGGTCCTAATCTGCCTTTCCAGTGGTTTTTCCTATTCTTCACGGAAGGATGTGTATGGTTTGCTGACAAGCTAGGTATTACTGATTCCGTGGCTTCAAGTGCCTTCACTCTCCTGAAGATAGACTTGCATCTGCATTCTCCCTGCCTCCCCTCCCCCGCCACCTCCCATCTCTTACCATCAAAACCTTTTTTCCAAGACCTTGTTCAATAGCTTTTTTTTCCTCCTTAAGAGAAAAGATGTCTTAAGATGTCTTAGGAGAGGTTAATTCATTACCCTGGGGGGGTTGGTCTGTCCAGAATTTGAAGTAAGGAGCAAATTTATTTTCATCTGCTTTTCTTCCACATTGTCCCTCCTGTTGGAAATTCTATCCCAATCTTCATTTTGAAATGTGTTCCTAGAATATTTAATACCTTTCTCTTAGCTTATAACTTATGCCTTCAACCTAGAACTAGAACATACCATAATCTCCTGGAGGACAAGGACTGGAGGATTAATCCATTCCTCCTGGAGGTACATGAAAATGAAAGCACCCTTAAATGAGGACTCACTCAGTTGAATAATGTATTCCTGTTTTCATGCTTATGAGGGAGGCATGCCTAGGGATTGGCCATAATTCAGTCAATTATAGGCATCACACATTTCATATCAGAGGGGATTAGTGTGAAACTGAGGGGTGGGCAGAAGAGGGAGAAGTCACTGGTCATTTTGAAGTACTTCCATCCCTGGTCTGGGCAATTACCTGTTTCTTTCTGATTGCGCCCAGTATATCCTGGGCATTTTGTGTTGACGCGCAGGAGCTGTATGTGCCAAGTTTCATTGTACACCATTTCTTCCTGTACACCTACTCCGTTCTCAGTTTGCCATCACCCGTGCTACAAGTCAAAGCCACCCTAGTCACCTGCTTCCTGTCTCCTTACTCCTTACATCCTGTCTCCTGCTAGTTCCTGTCAGTTCTACCTCAGCAGTCTTTCACATCCTTCCTCCTCACTTCCTTTCAGTGGCCTCTCAGCTTTCTTTACCTCTTTCTACTTCCAGTCTACTTTCTACACAATGTTAGATTCATCTTACTGAAACCTAGCTCTGACCATGTATCCCATGTACGTGTTCTGTCTTCCCTGCTAGACTGTAAGCTCCTTATGGGCAGGATCTGTGTTTCAGTCATCTTTGTATCCCATAGCACCTATCAATAAATATATCTTGAATGAACAGCATAAAGCCTTGTCTTAAGTGAAATGATGTTTTCCAGATGATACGTAGGTTTCTCTCGGGTAATTGCAAGATTTCAAAAGTGCTCCTAATATCAAGTTGGTTAAGTAGTAACAACTATGAATTAACCACAGGGAAAATTTCAGAAAACTTTTAATTTTTTTCCGTTGGAATCAGCATGGATGTGTGTATATGGATGGTTCAATAAATATATTTTTATATATACATGTATCACAGAAAGTTTACATTCCATCTTCAAACTGCAGAAATAGATTTTTTTTTACAAGCCAAAAAATAACTGCCATAACATTTATGACTTCATGCAAAAAACAGGGTTGAATAAGGGACAAAGGGGAATTGGTTGTTCAAGGTTAAGAGTCCAGGGAGAAGTAAAAATATACCATAAGGAGGCGATTGCTTAACACGCTGCTTAAGGTGGTAGCCAAACAAATCCTTAACTGCAGCATTAAGGCCATACCAAGTTTATACATATATACAAAGAAATTTCCATATAAAAGACATACTATCACATTTTCTTCCAGGAAAGGATGAGGAGCTTTGTGAGTAATCCTGACCCAGTTTTCCAGGCCCGTTCATTGTTTAAGATGTCCCCAGGCTACTGAGAAATGTCTTCTACTTTGGCTAGTTGTCAGTTACTGCTGTGTGGGCTTGTGATTTTTGCAGTCTCCTACAGGGAACTATGAATTATTTTGAACCTCTTCCATCATGGATGATGAAGCATTTAGCAGCTTAGCTAACACTGCCCAATCCAGCATAATTTTTACATCTCCCAAAAAGTACTGTAATTACAGTCAGAATTGTAATTTGCATTTGTCTTACCTGTAACAGACTCTACAGTCAGTGTTGGCATTGTGACCTAAGAACTACACAGTGCCTTTCTATTCTTTGGAGTTAAAAGAGAACTTTTTGAATAAAGTGTAATGACCAGAGTGTGAGGTTTCAGGTAACAACCCCTAGAGTCACTGAAAGTTAATAACTTTGTTTTTATTGGCGGTGCCACAAGGCATGCAGAAACTCAGTTCCCGACCAGGGATCAAGCCCATGCCACCTGCAATGGAAGCAGAGTCTTGATCACTGGACACCTCCCAGGGAAGGTCCCTTAGTAATAAACTTTTATCTCCACTGTATCACACATGTAAGTTGGCAGTACCTTTTCGGAAAAAAGGAAATGTAAAATTACTTGCAGAAGTATCATACATGGGATTTGCTCTTCTGCCTAAACATCAAGTCAGGCAACTTTTAAGACAAAGGGCAGATCTTTTGTGCAAATATCTACATGAGTTAAATGGGGAAAGCTTGAAGGGCAAGTCCTTTGGAGCTGACTTCCAGTGATGCAGAAGTCATTTACTTTGGCAAGGTTGAGGGGAAATCGAGATTGGCCCATCTCAGTGAATGAATCTTGTCCCCTCCCACCCCCCCCCAAAAAGAAAGTCTAAGATAAATTATGTAAATAGGGTACAGTGACTGAGCATTTATTTGATAATGTTATCACTCATTTTGGAATGTTGTAGATTAATCTAACTGCTTTTTCATTAATGTTGACTTAGCTATGAATTGGATATCAAATAGTCCTGTTCATCCCCAGTTTTCTATGGGCCAGTTTCCAAGCAGGGCCTTAGGGCATTCACAACTTTGGTTGCAAGGTAATTCGTCATGTCCCATGTTCCCTGGGTCAGTCAATTTTGAGAATGAGGTCTCTGGAAATGGCTTGTCCTGGGAGAGGACCAGATAATGTGTGGTTTGGAAGCACTTTAGTATGTCTGAACACTTAGAAAGTGAGCAGTCACTGTACTTTCCAAGTGTACTTCACCCAGAATGACACTAGTTAATTTACATTGCTTGCAGTGATTTGAAACATTCTAGGTAAACTGAGTTTGGACTGATCCAGACAATGAGACAGGGATCCACTTCGACAGCCTTACTTCCAGGCGTAAAATCATTCAGGGTTTTGTCTTAGACTCTTTGTGGTTCATGTTGTACATGTCGAGTCTAATTCCAACAGTGAAGGTGTGTATTGCATCGTTTTTCAAACTTATTTGCAGGCTGCTCAAGTCAGTTGGCGTGTTTGTCTTGAAAGTAGAACTTGGCTATTTAACTTGCTTTGAAAAAAAAAAATTTTTTTTTAAGAACATTGTACTTTTGTTTAATGTGTGCAGAAATCACATTGGGTAGGTATTTTATCTGGGTCCAATATACTAAGTAGCAAAGATGCACACTTTGGGGTTTAATTTACTCATCTCATTGTAACTGTTGTTAGTGCTGAAAATATAATGGATCCAATATGGGAAGATCGAACCATCAAAATACGAAATAGTCTGGATTTAAAAACTGCTCTGAAATGCACTGTGGTATGTCCATTTTTTTTTTCTGTCCCTTACGTAGTCTGGCTAAATGACGTGTTGAGCATGGTACACTTTAAATGAGGTAGAAATATATCTAATGTGGGAAAAACTGAGTTTAGCAAAGTGATTATTTGATACATAAGCACCACTTCTAAAAAAGACTTGGGGCAGTCTTTCATTTACTAGGATAGGTAATACTAACCTTCTCTTTCCCAAAAATATTCTTTCTGAAGAAAGGTAAATCATTCAGAAAGAAACTATTCTTTTTATATACTTCCATAGGCAATGACTTACTAAAACCCAGTTACTTTTGTCTTATTTTATTTTTTCCTGTTCATATTTGACTTTTTCCCCCTCCATACACTTTTTACTTTATAGTCATGATTTCGTGCTTTGAATGGAGAGATGGTCTCTGGGTTGGGAGAATTATTTTAAAGCTGAGAAAAAAAAGGGGTGTGCTAAACTGTACTTGTCTTTTAGGTCATCTCTGTTTAATATTTCAGATCAACAAAATGTAATAATATTAGGAGCACAGTCTCTCCTTTACAAATACCTGCCTTGTACTAAGATTGGCTTGGCATGATATTTGACAAAAGATAAAACTCTAAGAGTAACTTTCTCAGAATCACTGTAGAATAGCGAGCTGAATGTGCCTTTATTGTCTTCTTTCTAGTGCCTACCTATCACAAACTAAATGCTTAATACTTGGCTTGAATTGGTGTCCTTGACGATGTGAATTTCTAGTGGGTACTTACTATATCTGCTGCTAAGATAAAGTTGAGTTTCCTGCAAGAAAGTACCGGTAAGTTTGAATTGGGTTGGAAGTATTAATATCAGCTAATGGTGAGGGGATGGAATGAACTACTTTACAAACCATGAAAGGGATACCCTTTTGGTTTTTTCTACTTTTAAGGTAGTCCTGATGTACTCCAAATCTGTCTTTCCAAACATGCCTACCATTCATTAGACTTCAGCCAAATGGATAATCACAGTGCCTTATATTGTGCCCTTTGTTATTTACCTCCTTATTTTTAGTCATGTTCCTTCTGCCAGAATACTCTTCTCCCATCTGTCAAAATCTCACATGTTTTTTAAGGTTCCTACTTCTCAAATGGCCTGTCAGCCATGAAACGTTCAGTCCATGGCACCCTCCTTTCTCTGTCACATATTTCCCGCATTCCACACTAGTAATTACTTCAGAACTTCTATTATCCCTTCCTGTGTTGTAAGAAAAGAAGCTCTGTTATATTCTGATACCCTGCTTTCATGGTAAACTGCCTTGATGCAGTAGAATAGCTGGTAGATGAAGACAGGCAGGTGTAGGGAGGTTAAAAACAAAGCTGATAGGAAAACTGGAAAGAATATGTAAACTCTAGTCCTGGCTATAACACTTTCTTTTGAAACCTCCCCCTTGAGCTTCCAGCTCAAACCTTGAAGGCCTAAACGGCTTTCTCTAGGCTGAGACATTTTGAAAAATCACCTAAAGGCAAGCACTCAACAGTTGCCTGGAGACCTGCTGAACCTGACTTGTGGTCACTAGGTAGGGTTCATTCAGAGTGCCATTTTTGCTCACCAGCATCCAGACAGAGCTACACAGAATACGGCTCTGGCCCTCAGAGCAGGAGCCAAGATTTGCCTGGCATTGCTGCTTATAGCTCATGGTCCTGTTATGCCAAAGGCCAGACTTGTGGGTGCAACTGAAGAGTCATGGATGAGGCCAAAGGGGACCTCAGAAATGTAAGAAGCCTACTCCCATGAACTGGTCTGACTAGTTTGTACACATCAAGTTACCTAGGTGATTGTTTAGTCAGAAACATAAGGAGACAAGTAGTAGCTTATTAAAAAATTTTGGGAGTGGCAGTGGGTTACGTTCATAGATTATAAAGAGTTGCTCCCTTTTTACCTCCGCAGCTACTTGAAGGAAGTGGTGATCTTGGGTTTAACACTTTGAAAGGTGACTTAAAAAGGAAACTGCTTTCTTGTTAAAAGTCTGAGCCCAGATAGCCATCCTCCAAGAG EMBV3_40704 GATTTGGTGGTAATCCAGGTGGCTTTGGGAATCAGGGTGGATTTGGAAATAGTCGAGGGG Gene GeneID:540632|TARDBP:NM_001046485:91_cdna Constitutive 0 NULL GeneID:540632 16 GENE TARDBP MGC129120 TAR DNA binding protein EMBV3_04238 ATCCAACCACAGTGTCACCGAGACCTTCATCTCCACGCAGATGGCCTCTTCTTCCCAGTA Gene GeneID:503578|HNF1A:XM_002694526:455_cdna Constitutive 0 NULL GeneID:503578 17 GENE HNF1A HNF-1a HNF1 homeobox A EMBV3_42464 TTGGAAGGAGTTCATGCGCACGCTAGGGTTGCGCGAGGCGGAGATCGAGGCGGTGGAGGT Gene GeneID:783432|TNFRSF25:NM_001144077:248_cdna Constitutive 0 NULL GeneID:783432 16 GENE TNFRSF25 TNFRSF12 tumor necrosis factor receptor superfamily, member 25 EMBV3_43376 TGGTACCAAAAGGAAACTGTATAGGAGCAAAGTAAACAGTAGCTTTGCTGAAATGGAAAC Gene BVT0101_021203 + 0 NULL GK000005.2:63207286-63229071 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195312 TCONS_00195318 TCONS_00195317 TCONS_00195313 TCONS_00195314 TCONS_00195311 TCONS_00195315 TCONS_00195316 1 XLOC_118019 Coding TCONS_00195313 XLOC_118019 Coding Coding ANKS1B 5:63228329-63270685 j TSS145574 2458 2 TCONS_00195313_1 139 4 0.942061149805218 0.000593830496554267 9.54739857642866e-08 0.000921838071328631 4.4639876275776e-15 4.31347559282097e-09 3.85755987370022e-08 7.89489514659541e-08 8.12521378141558e-08 1.36996725158445e-07 5.4874531448453e-55 2.43637155736645e-10 2.48927082993622e-18 3.18713556497069e-19 2.10130514126429e-10 1.03475594862121e-16 0 5.44920348269924e-14 2.91549898384452e-57 3.48034576591499e-07 0.00136069501871964 0.000622570430827791 0 5.81828314515981e-17 4.05851421971115e-16 0.000932974960219941 0.000200319271934772 4.69845909900699e-07 3.87212079817731e-14 1.68889999590726e-33 1.66580147397471e-16 XM_005206696.1 ANKS1B PREDICTED: Bos taurus ankyrin repeat and sterile alpha motif domain containing 1B (ANKS1B), transcript variant X1, mRNA. 0.0 3864 100.00 0.871033360455655 NM_001204080.1 ANKS1B Homo sapiens ankyrin repeat and sterile alpha motif domain containing 1B (ANKS1B), transcript variant 11, mRNA. 0.0 2352 83.62 0.873474369406021 TCONS_00195313_1 sp|Q8BIZ1|ANS1B_MOUSE ANS1B_MOUSE Ankyrin repeat and sterile alpha motif domain-containing protein 1B; 2e-91 290 100.00 0.985611510791367 1 coding 0 1 0 0 -0.403820966883729 0.301787094585296 -0.00591097692359657 0.897752360118697 GCGTTAAGGCACTTACACTGTCTGAGGACCAGTTTCCACCTGTGAGCTGCTGAGGCTAACCTCCAGCGCCCACTCGCCCACTCGTAATTACAACACGGCGGGAATAGTTAGCAAAGTGTTGTCATCCACAGGGCCCTGCGTCAAGCCTGCGGTGCGCTGTTTCCCTCCTCCCACCCCTGCACCCTCGTCTCTGCAGAGTTGTCAAGAGAGAGTGCTTTGACTTGCCCTCCCCAACCTGCCTGGCTCTGGGGAGCTCTGGCCGGCACAGGACAACAGTAAGGGATGAACATAATTGCTGAGCATGAGATTCGTAACATCTCCTGTGCTGCCCAGGACCCGGAAGACCTCTCGACGTTCGCTTATATCACTAAGGACTTGAAGTCCAATCACCACTACTGTCACGTGTTCACGGCCTTTGATGTGAATTTAGCCTATGAGATCATCCTAACACTTGGACAGGCATTTGAAGTCGCCTATCAGCTTGCACTGCAAGCCAGGAAAGGGGGGCATTCCTCCACGCTTCCAGAAAGCTTTGAAAACAAGCCCTCCAAGCCCATCCCCAAGCCCCGCGTCAGCATTCGAAAGTCGGTGCAGATCGACCCATCTGAGCAAAAGACTCTGGCCAACCTGCCGTGGATCGTGGAGCCAGGACAAGAGGCCAAGCGGGGGATAAATACCAAGTATGAGACCACAATTTTCTGATACTCACCTCCTTCCCGTCCTCGTGGTGCCTTGCACGCCGAGCAGTCCCGGAGCAGGCTTTCCACCCAGCCCGGGAGGAAGACTGCTCTGTTTGTGTGGCCTTGTCATGGGCGAGAGGTCACTGGCCACTCCTGGGGATGTTCTTTCTGCACCGGTGACAGAAAGTGCAACCAAGACTTCCCAGCTGTAACCCCTGAGAGACAGAGCAGAGGTTTGTGGCTGATGCTCCCAACCCCCACTCCTGGCCACCACCCGAGGTATTTCTCATGACTCTGCCCCAACCTCGCTTTGCTGTTATTTGGGGATAACACCTTGAAAAAACACAGGGGGTCGCTTATACTGCCGAAAAGTGTAAAAATCTTGGGTTTATTTTCCACTGTCAGCCGTTTTCAAGGTAGAACAGAACTACCCCCAGAAAGCATCTCTAAAGTCATGATCTCACTAAGTATTGTTTCATGCAAGAGAACAGAAGTTACTCCCCTGATTGCCAGGGAATTCTGTTTCCCAGTTTCTATATTTGTGGATTTTATATGTAATCAACCATGTCAGATAAAGAAAATCTTTACATCTGTGGATTGATTCAAAAACCTAATGATTTAAAACAGAGGAATTTATTATGCACAGAAAAACGTGTCTTGTATTAAATATTTTTATTAAAAAGAATGTTTCACTAATGCATTGATAAGAAAACTAGGTTAGTCGTGAGGGATGTTTCTGGTTTCATTTCAAATAACTAAATTTCTCCTGCTACCACCAAGAGGGCTGCTCAGTGTGGCAGAGTACCCAGGCCATTCCCCAGAGCAGGAGATTCAGGCAGCAGACTGGCGTCTTACCGAAAGTGCTGACGCAGCCATAAGCCTGCAGAGATTTTTTTTTTTTTTAATCTTCACAGTTTTAAAGAACATGTTAAAAAAATCTAGGGCTCCTGCTGTCAAGATTTCTGTCATGGAAACCTTGTTTGAGAAAGGTATTAATAAAATTCTATTGCAAAAAAACTTTTTTTCTAGGAAAAAATAAAAAAAATAAAAAAAGAGAGATTCCAAAGTAATAAAACTTTCTTGAAACAAAATAAATAAATGTTTGCTTACTCTTTGATTAAATAAAATTTACTTACATTTCTTTAAGGTATTTTAATTTTTTAATGTCTCTGTGGAGTATTTGTATGATACCATAATGTATATTTATGTAGAATCAAATTATATAAACAGTACCAATATCATTATAGAAAAAAATAACATTTTAATGTATATTGTTCTAATCAATCACATTGTGAATCATTTTGAAGTTCATTATAGCGATATTGATAAATTGTGGGATTGTCTTAATGTTTTTTTAATTAACCAATATTATTTTAAATCTGAGATTATCAGTTACATCATCAGTTGGTGAGTTTTGAAGACAGAAAATTTTATTTCAAACTGACAAATGTATATGGCTTTAGTTCAGTGTTAAAGAATTTTAATACAATATTAAATTACTTGAACTGAACAGTTCCTTGTATATATTTTGCCTATTCACTGTTGATATGTATGTAGTAAACTGAGAGTAAAATAACACTAAAATATGGTACCAAAAGGAAACTGTATAGGAGCAAAGTAAACAGTAGCTTTGCTGAAATGGAAACATATGTGTAAATATGCTTGGGCTTCCAGTTATAAATTTTGTAATTTTTGTCATTATTTATATCCTATTAAAAAAAAGCACATAAAATAAAATGGAAACTATACAGCTGTTGGTGCTTGGCATCATTCTGTGA EMBV3_04434 GCATGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACG Gene BVT0102_383429 + 0 NULL GK000021.2:8939029-9375210 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209635 TCONS_00136862 TCONS_00063064 TCONS_00060450 TCONS_00196842 TCONS_00088085 TCONS_00023027 TCONS_00233446 TCONS_00031937 TCONS_00186029 TCONS_00224115 TCONS_00023028 TCONS_00229574 TCONS_00253241 TCONS_00250504 TCONS_00197506 TCONS_00177939 TCONS_00162600 TCONS_00124128 TCONS_00135549 TCONS_00135700 TCONS_00249014 TCONS_00037712 TCONS_00060448 TCONS_00254141 TCONS_00060447 TCONS_00006941 TCONS_00141271 TCONS_00110347 TCONS_00107450 TCONS_00111488 TCONS_00231501 TCONS_00250238 TCONS_00060451 TCONS_00055354 TCONS_00039653 TCONS_00039852 TCONS_00210179 TCONS_00070842 TCONS_00189808 TCONS_00251280 TCONS_00229877 TCONS_00056147 TCONS_00098383 TCONS_00190575 TCONS_00233374 TCONS_00166316 TCONS_00060446 TCONS_00033237 TCONS_00122496 TCONS_00162777 TCONS_00080323 TCONS_00040696 TCONS_00152746 TCONS_00007508 TCONS_00060449 TCONS_00198911 TCONS_00011865 TCONS_00219474 TCONS_00187395 55 XLOC_128146 XLOC_083073 XLOC_037791 XLOC_036736 XLOC_118507 XLOC_052872 XLOC_013697 XLOC_142928 XLOC_018182 XLOC_112082 XLOC_137411 XLOC_013698 XLOC_139069 XLOC_156182 XLOC_153447 XLOC_119167 XLOC_107712 XLOC_099481 XLOC_075680 XLOC_081772 XLOC_081923 XLOC_151957 XLOC_021541 XLOC_157079 XLOC_002503 XLOC_085699 XLOC_066251 XLOC_063360 XLOC_067388 XLOC_140990 XLOC_153181 XLOC_033162 XLOC_023470 XLOC_023669 XLOC_128689 XLOC_042619 XLOC_115845 XLOC_154223 XLOC_139371 XLOC_033950 XLOC_058629 XLOC_116610 XLOC_142856 XLOC_101154 XLOC_019471 XLOC_074051 XLOC_099658 XLOC_049207 XLOC_024512 XLOC_092511 XLOC_003069 XLOC_120564 XLOC_007415 XLOC_132793 XLOC_113441 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_04493 CCGGGAGGCTGCCTATGGCTTCTTCCTGCTCTGGGCTTGTGCTGTTGGCCTCTACATGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34587 CACTGCCACTTCTCAAATCCCCAGAGTCTTTCAGAAAAGGGGAGTAGAGCAGGATTACTT Gene BVT0102_395648 - 1 EMBV3_04778 GK000030.2:131717093-131724168 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245745 TCONS_00245750 TCONS_00245740 TCONS_00245747 TCONS_00245746 TCONS_00245742 TCONS_00245753 TCONS_00245752 TCONS_00245749 TCONS_00245744 TCONS_00245751 TCONS_00245748 TCONS_00245741 TCONS_00245739 1 XLOC_150819 Coding TCONS_00245750 XLOC_150819 Coding Coding GPR64 X:131656940-131718604 j TSS184415 7334 1 TCONS_00245750_15 894 0.204663212435233 27 0.881501062225322 0.00013913264692673 4.82073274610022e-05 3.8711548025224e-05 4.41000737552341e-05 3.34826763961079e-05 9.46209554282354e-05 6.19663165186118e-06 4.08502660003973e-05 6.45497871696996e-05 0.000194428071749703 0.000361806169083889 0.000107138742537716 6.1780540195488e-05 0.000386149915138518 0.000137721101103157 0.00104352700006104 0.000398712176575041 1.51633369145167e-05 6.6029136896873e-05 5.50576678422564e-05 3.82191465748626e-05 0.000699886736429511 0.000222689706929109 0.000573211500193166 6.99530621438697e-05 6.63853822930345e-05 7.8447149538114e-06 9.00930445532954e-05 2.21732412755531e-05 0.00016778053264153 XM_005228402.1 GPR64 PREDICTED: Bos taurus G protein-coupled receptor 64 (GPR64), 0.0 8120 100.00 0.613716934824107 NM_005756.3 GPR64 Homo sapiens G protein-coupled receptor 64 (GPR64), transcript 0.0 5104 85.32 0.613035178620125 TCONS_00245750_15 sp|Q8IZP9|GPR64_HUMAN GPR64_HUMAN G-protein coupled receptor 64; 0.0 1472 84.68 0.998881431767338 0 coding 0 0 1 0 -0.112981958173681 0.472859237076787 0.0117449522361825 0.822945738824667 GGTGCATTTCAATTCCTTTATTGAACCAACGATATTTGAAGCAGTATAGTATGCAAGAGATTAACCAGCTGACCAATAAGATGAATGGGAAAGAGAGTCACAAACATCCCTTGGAGGAGGAAGAGAGCCTGAAGCAAGCGGTTGAAGAGCATGTCAGCAATTATTTTGCTGATACTAGGGAATGGGTGAGGCTTCCTCCCTGATACCTCAAATGCCAGCCAGGTTGGCTATATCCTGAAACCAAATCATGTTGACGACTTTGTTGAGCACAAAGAGGGCAGCACCCAGAGAGCACTGAAAAGTGATGTAAGGAAGAACTCCAGCCATGACCAGACATCCCCATGTAGTATGGATCACCAATAATCTGGGCCGTTACTGACTGAAGGACAGGAATTCGAAAAAATAAGAGGAGACTGAACCAGAAAACTCCACCATTCCAAGCGCAGCACTGAAAAATTCTACTAACAATATGTGGTTCACTGCCTTGCTTCCTTTCTATGCTCTGGGCTCTCTGAGCCAGGACACTGCTTGCCCTTCTTCGACGCTGCTCCTGTCTCTCTTGCTGAATTCAAGCATTTAGCTTTGAGATGGTACAAATTCCCCAGATGGAGTCTTTGATTCTCCTGGCAAGGTCCTGCAGGAAGGTTTTGACACTGTTAGCTGTCTCTTTACCGCCCAAACTATCAACTACAGAAAGAAGGGAGAAGTGTCCCCAGATATTTCATCATGAAGGACCCGAGAGATTCGCTGCCATGGCTCTAGCTCCAGCCGGGCCCCTCGCCCACCACGGGCCAGCTCAGCTCCTCTGAGCCCCTCCGTGCCCTGCTGCCTGCTGTAGCTTGGGTGCTGCCAGGGCTAGGGCTGCTGCGCCCGCACTGAATACTGATTATTTTAAGCTACCTGTGGAAATGGTTTTCCTTGCCAATATTTGATTTAGGAATAGGCATGTGACCGGCTTTAGCCCAAAGAGACACCTGGGAAAATCTGCTGGGGGACTTCCAGGAAAAAGTTCCCCACTCTTGACACTCCAGGTTTCTCCTCTTCCTCTAGACATGCACTCTCTTCTAATATGATAGCCACTAGACACATGTGGGTATTTAAAATTAAAATAATTAAAATTAAGTGAAATTAAAAATTCAGATCCTCAGTCACACAAGTTACATGTCAAGCACTCAGTGTTCACCTAGGGCTAGTGGCTGCCTTATGGGACAGTGCAGACACAGTATTTCCATCATTGCAGAAAGTTCTATTTGATGATGTTGTGCCTGGATATTTTGAGTTTGGATTTGATGCTGAAACAGTGATAGCCATCTGAAAAACACTGAAAGGGGCTAGGGATCTCAAGTGAAAATGCAGATAACCTGAGGTTTTGAAAGGTTGTCTTCCCTGATAGCTCAGTTGGTAAAGAATCTGCCTGCAATGCTAGAAGATCCTGGTTCGATTCCTGGGACAGGCTACCCACTCCAGTATTGGACTTTCCTTGTGGCTCAGCTGTCAAGAATCTGCCTGCAATATGGGAGACTTGCATTCTATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGAAAAGGCTACCCACTGCAGTATCCTGGCCTGCAGAATTCCATGGACTGTATGGTCCATGGGGTCACAAAGAGTCAGACACTGAGTGACTTTTCCTTCACTTTGAAAGGTTGAGTCCCTAAACTAACAGTATCTGCAGGATGAAAGAACAGAAGGCTGGAGAGCGTGTGGGTCTTCATAGAGGTTTACATTTGTCACATCATTTTAAATACTTTGGGACTTTTCCTGGTGGTCCAGTGGCTAAGACTCCACAATCTCAATGCCAGAAACCCACATTCGATCCCTAGTTCAGGAACTAGACCCCACATGCTGCAACTAAGAGTTCACATGCCACAACAAAGATCGAAGACCCCACATGCAGCAACTCAGACCTGGCTCAGCCAAACAAGTATTTTTTAAAAAGCTTCATGTGTTACCTTAGTGAATCCTGACAGGAGCTACAATCAGGTGTTAATCCTTTATTTTCTAAATGAGGGAACTGAGGCTTGGACAATTGGAGTCACTTCACACAGCTGAAAAGTAGAAGTGGTAGCATTCTTGAGAGCTGTACTATAAAAAAGGTTGAGCACTTAAGAATTGATGCTTTCAAGCTGTGGTGCTGGAAAAGACTCTTGCGAGTCCCTTGAACTGCAAGGAGATCAAACCAGTCAATCCTAAAGGAAATCAACCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTCCAGTACTTTGGCCACCTGATAACAAGAGCTGACTGATTGGAAAACACCCTGATGCTGGGAAAGATTGAAGGCAAGAGGACAAGGGGGTGACAGAGGATGAGATGGTTGGATGGCATCACTGACTGAATGGACACGAGTTTGAGCAAACTCTGGGAGATAGTGAAGGACAGGGAAGCCTGGCGTGCTACAGTCCATGGAGTTGCAAAGAGTTGGAGACGACTAAGTGACTGAACAACAACAACAGCATTCTAGAACTTGGGTCCTTAACCACTCCCTCAATATTTAGTCCCTGAAGCAGTTGAAAGTTACTTTTACACAATTTTTACTGAAACTTTGCTGTATTCATTTATCTTGTGATGGATTTTTACCTCCAAGACATCTGAGGAATAAAAGCAATAGTTTTGCTGATTTAATCTATTAAGAAGTAAGTTGATGTTCCAAGAGAACATGCTGTTTGAAACGTACCATGATGTGGGTACATCTTTACTTCAAGGAAATAAGAAGAAACAGATTGATCTTGGCAAGAAGCCTCGTGTTCACAAGATCACAGTGCTGTAAAAAACCATCAAGAACATGCTTACAATTCCAGTTTGCTGTCACCATCTGCTGAATCATCTCTCGTTGATTTTGTCCCCTACTCCAATGAGGTTGAAACTACAAGCCTAAATGATGCTACTTCAAGCGTGTTATCTACTTTGAACAAAACAGAAAAAACTAAAATCACTATAGTAAAAACCTTCAATGCATCAGGTGTCAAACCCCAGAGAAATATCTGCAATTTGTCATCTATTTGCAATAACTCAGCCTTTTTTAGAGGTGAGATCATGTTTCAATATGACGAAGAAAGCAATATTACCCAGAATCAAGTTATGGCTAATGGCACGGTAACTGGAATCCTGTCTCTAAGGGAATTGAAACAATCAGAACTCAACAAAACTCTGGAAACCTTAAGTGAGACTTATTTTACAGAGTGTGATGCAGCAGAGTCCCAAAGCACAGTAAATTGTACATTCACCATAAAATTGAATAAGACAATGAACATATGTGCTGTGATGGTTGCTTTCCAAACAGTAAAGATTCGACCCATGGAACAGTGCTGCTGTTCTGCCAGGACCCCCTGCCCTTCCTCCCTGGAGGAGGTAAAGAAACTGCAGTGTGACCTGCAGGATCCCGTTGAGTGTCTCGCTCGTCATCCACACGGCCCACCATTCTCTTCTTCCAGCAATGCCATCCCAGTTGCTCCTCCGGCCACCATTGTGTCCCAGATCTCTAGTGCCTTCTCTTTTGCTGAGCCTCTAGCTCATCCAGTTGTAACCCAGAGCCCTCACTCTCCAACAGGGGTGATTCCACTACCTTCTCCCCAGCCTTCAGCTCCCATAACTTCCAGCCCAGCCATTGATATGCCCCTGCCATCTGGAACTGTCTCTTCCCCTAAGCCTCCACCTGATCTTCCCCTCACCCTGTCCCCTGGGAAGTCGTCAGCCCCCTCTCCAACCACGTCTGCCCCTGTGAACGTCAACACGACCGGCATACCTCCTGACAAGACAGAAATTGTTCATACCAGCAGCATCAGTGTTTCTGATCTTGAGAACCAAGTGTCCCGGATGGAGCGGGCTCTGTCCTTAGGCAGCTTGGAGCCTAAACTCGCAGGACAAATGATAAACCAAGTCAGCCGACTCCTTCATTCTCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTGGCTTACAGCTGAATTTTTCAACCAAGACAATAAGTCTGACCTCCCCTTCTTTGGCTCTGGCTGTGATTAGAGTAAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCTGCGAATCTTCAGGTTTCTCTGGAAGCTCAGGCTCCTGAGAACAGTATTGGCGTTATTACTTTGCCTTCATCGTTGATGCGTCATTTACCAGCTGATGCTGTGGAGCTGGCTTCCAGGGTGCAGTTCAACTTTTTTGAAACTCCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTCTGATCAGCTATGTCATTTCCTCAAGCGTTGCGAACCTGACAGTCAAGAACTTGACAAGAAACGTGACGGTTACCTTAAAGCATATCGACCCGAGCCAGGATGACTTAACAGTGAGATGTGTATTTTGGGACTTGGGCAGAAATGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTGTCAAAGACAGGAGGCTGAATGAGACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCGTTCTGCTGGACTTGTCTCGAACATCCTTGCCACCAGCTCAGATGATGGCCCTAACATTTATTACCTATATTGGTTGTGGGCTTTCATCAATTTTTCTGTCAGTTACTCTTGTAACCTACATAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGCGCAGCCCTGCTCCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAAGAGGCCTCTGCATCTCAGTGGCTGTATTTCTGCATTATTTTCTCTTGGTCTCATTCACATGGATGGGCTTAGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACATCCGAAAATACATCCTTAAATTCTGCATTTTTGGTTGGGGCATCCCAGCTGTGGTTGTGGCCATCGTCCTGATTATATCTCCAGATAACTATGGGCTTGGATCCTATGGGAAATTCCCCAACGGGTCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATCACGGTTGTGGGGTATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTCAGCTCTGTCGAATTAAAAGGAAGAAGCAACTGGGAGCCCAAAGAAAAACTAGTATTCAAGACCTCAGGAGCGTCGCTGGCCTTACATTTTTACTAGGAATTACTTGGGGCTTTGCCTTCTTCGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTCAATACCTTACAAGGATTTTTCATATTCGTCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGGAGACGATATCTGTGTTGTGGAAAGTTACGACTGGCGGAAAATTCTGACTGGAGTAAGACTGCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGGGTCTCCAGCTCTTCAAATTCCTTACAGTCAAACAGTAACTCCACCCACTCCACCACGCTGCTAGTGAATAATGATTGCTCAGGACTTGCCAGCGGGAACGGGAATGCTTCTACAGAGAAGAATGGTGTTTCTTTCAGTGTTCAGAATGGAGATGTGTGCCTCCATGATTTCACTGGAAAACAGCATATATTTAATGAGAAAGAAGATTCCTGCAGTGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGCTTACACTTTATTGAGCAAATGTGATTCCTTTTCCTAAAATCAAAGCATGTTGCTTGACAGTGTGAAAATGTCCAATCTTACCTTTTACACAATGTGAGTTGTATAAAATCAACTAATTTTATACTCAGCAACTTTGGGATGAACATAAGCTAACTGAGGGCAATGGTTGCTATTGGAAGAGGAAACCAAGACATAATACCATGGTTCTAAGACATTTGCAATTTGGTTTCTTATCCTTCATTTTAAAAGAAGATTGGTTTTAAACAACACACTAAGAATAAGACTCATTTAAAACAAAATCAAAGCAGTTCATTTGCAGCCTCTTTTAAAGAGGCTAATATATCTTTGATAACATCATAGAAAGCCACTGTTGACTTGATCCTGTTGGTGAGTTCGTTGTGCATGCCTTTGTTGTAAATAAGCTAAACTCTAGTGATCCACATGTCAAAAATCTTCTGCATTTTTGGTATTTATTTTCTACTGTGTAAATTTCTTTCTTTGTAGAATCATGGTTGTGTTGTTGCGTCTAATGTGATAATTCAGAAAATCGTTGCTGGTTCAGTGAACTCTAAACCTCCTTTTGGAGATTATATGGGATGTGAAATACAGGACCCTCACTGAAATCAAGAAATAATGACGCCAGCCAGACTGGAAAAATGTAAGCAGACAGTGCCACAATTAGCTCATACAGTGCCTTGGAGTGAGTTAGAAAAAGGTGCTCCCACTGGGCAGACACAGTGTCATGGGCTCATGATTTGGCAGAGTGGAGGCCATATTTTAGCCTCATTCACTCTCTTGGGTACACCATTGTTCAGGGTACCAGCTGTACAACCATACGTAGCATCCAATACCGACACCCATCTCCTGACCTCATTCCTAATCATCAGATTATGGAAGCTGCACCAGGATGTTTAGCTTAACACCTTGGTGACAGAGAGGGATGGAAGTGTGATCTGGACCGTATGGCAGGAAGATCGTGAATGTGCAGGAGATACATACACTGCCACTTCTCAAATCCCCAGAGTCTTTCAGAAAAGGGGAGTAGAGCAGGATTACTTTTTAAAAGAGATGTACATCAAAAGAATCATATTGCTGTTCTTTAAAAGGCAACTGCATGGTACTTTGTTGATTGTTATGCCTGGTACACTCTAGCCCAGCCAGAGCTATAATTATTTTTTAAAATACTTGTCTTGATGAATGTATAGTGACAAGGGGGAGCAGCTATTGGGAACAGTGAACTATCCTGCAATGCTATTGTTTCCATATATATCGAACCCTTATTGCTCCTAGTCACAGCGAGTCTGTCTTGCTTCCTACCTACAACTTCTTGAGCAGTGCTTCGTGTCCTTATTAGGAACATTTTGAAACCCTTTAGTTAGGTCTTTCACTAAGGTTCCCTTTCATATATATTTCAAGTGAATGCTGTATCCCAGACTAACCGTAGTCATAATGTAATACACTTCTGTGAGTGCTGATTAGTCTTTGCGCTATTTCTTTTCCAATTTGTTTAATTGTCTTGTATTTATATGTTAAAATCGACAAAAATGTTAAAAATCGCCAAAATAAATTTGCAGTTAAGTCCTT EMBV3_36213 AGCGGATGGCTGCTGCACTCTTCCAACAAGAAACAAAGCCAGCCTGCGTGTTCAACAACG Variant GeneID:506264|CRIM1:XM_002691280:355_cdna 870^991 1 EMBV3_28385 GeneID:506264 11 GENE CRIM1 NULL cysteine rich transmembrane BMP regulator 1 (chordin-like) EMBV3_38113 CAATTAACAAAAGGGTTTCTTTTTTAGGACTTCAGTAGAGGGGTAAGGCAATGGCAACCC Gene BVV0101_032156 - 1 EMBV3_33407 GK000004.2:103520782-103542204 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14170 TTGGTGGGGGCAGCAAACATAATTAAGATGGCCTGGATAATGGAAAGTGGGAGAGCGCTG Gene BVT0102_191062 + 0 NULL GK000001.2:44281309-44294563 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01560 TCTGAGCATTTCACGGGGATCAGTTGGGGGAAGAAATGTCTAAAGTGGCCCTGGGGACAA Gene BVV0102_153787 + 0 NULL GK000021.2:69967810-69978022 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00880 CAAACACCAAGCAGCTCAGAGAAGGGGAGGCAAGAGAGACGTAGCCAAGAAACTGGAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17962 ACAATGAGGAGAGTCAAAAACACGCGGCCTTAAGCCTCAGCAAGGAGCATAATCCAACCC Gene GeneID:514223|ILKAP:NM_001075655:5_cdna Constitutive 0 NULL GeneID:514223 3 GENE ILKAP MGC142729 integrin-linked kinase-associated serine/threonine phosphatase 2C EMBV3_32337 ATGAGTTGACGTTCTCTGAGGGGGATGTGATCATCGTGGATGGCGAGGAGGACCAGGAGT Gene GeneID:618009|ASAP2:XM_002691530:564_cdna UTR3_Alt 2 NULL GeneID:618009 11 GENE ASAP2 DDEF2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 EMBV3_07132 GTGAAAGCCATGGGTTCTTTCTTTACCTATTACTTGTGCCATATTTTCTTCACCCCAGAC Gene GeneID:530910|FRMD6:NM_001102133:88_cdna Constitutive 2 NULL GeneID:530910 10 GENE FRMD6 MGC143214 FERM domain containing 6 EMBV3_28773 TTCCTGCGCCTGATGGAACCCCAAGACCGTGAGACTCTGCAGCTGCTGGTGAACACCTCT Gene GeneID:100139898|LOC100139898:XM_002697861:365_cdna Constitutive 0 NULL GeneID:100139898 25 GENE LOC100139898 NULL similar to RIKEN cDNA 9930021D14 EMBV3_17255 CAGCTCACCTTATCAGCTCCACTGGGAGGTCTTTCCTGAAGTCTCACCTCCTTCCATCTT Gene GeneID:510239|SEMA4A:NM_001075440:120_cdna Constitutive 0 NULL GeneID:510239 3 GENE SEMA4A NULL sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A EMBV3_04596 TGCCTATGAGTTCGACCTCAGCCCTCTCAAATCTTTAGCAATTAAGGAGTTTTTCTCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34492 TGCTAAGCAGCCTGATCTACTTACTGTTCAAACTGTCGCCCAGGATGAAGACAGCTTTGT Gene GeneID:618294|IL9R:XM_002683814:44_cdna Constitutive 0 NULL GeneID:618294 25 GENE IL9R NULL interleukin 9 receptor EMBV3_37483 ATGAGGAACTGGCCAAGGACCCCGACGTGGGCCATCTGGACCCGGTTCTTCCCTGCTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22026 TGGCTGAGGGACCATGTGAAGCAGCCTGAATACAAACACCTGGACTTAACCCCGTGCCTT Gene GeneID:100301003|LOC100301003:XM_002696070:405_cdna Constitutive 0 NULL GeneID:100301003 19 GENE LOC100301003 NULL similar to intercellular adhesion molecule 2 EMBV3_26282 TAGAAGAGTGGGAGGTATGACTAGGGGGCAATGTCGCTTCCAGGGGAAATTCTCAGACCT Gene GeneID:100125390|B4GALT2:NM_001105030:2_cdna Constitutive 0 NULL GeneID:100125390 3 GENE B4GALT2 MGC165796 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 EMBV3_20593 TGGTTTCCCTGGCCGGACTAAAGCAGATCAAAGACATCCTGAAGGGCTCCCTGCGTTTCA Gene GeneID:614554|TBC1D5:XM_002685181:48_cdna Constitutive 1 NULL GeneID:614554 1 GENE TBC1D5 NULL TBC1 domain family, member 5 EMBV3_20224 TGCACTAATGGCGTTGCGGAAGGCTGATGACTCAAGCGAAAACCCTCTTCTTCGGGCTCT Gene BVV0102_067127 + 0 NULL GK000007.2:45114531-45121039 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10826 AGTTGGTCATGGAGCCTGAATTTGTCAATGTGTGTTTCTGGTTCGTGCCCCCCAGTCTGC Gene GeneID:516241|LOC516241:XM_002687241:63_cdna UTR3_Alt 3 NULL GeneID:516241 5 GENE LOC516241 NULL similar to cysteine sulfinate decarboxylase EMBV3_12917 GAGGTACCGCAACATTCGATGGGACAGCAATAGCAAACGCAGTTGTGAAAGAACTTGCTG Gene GeneID:540526|MSH6:XM_002691315:446_cdna Constitutive 0 NULL GeneID:540526 11 GENE MSH6 NULL mutS homolog 6 (E. coli) EMBV3_15386 GATGACAAAACTGTGGGGCCCTGATCCACCTGAGTCAGTAAGTAACTTAAAAGCTAACGG Gene BVT0102_063240 + 0 NULL GK000022.2:759234-891143 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127747 TCONS_00127748 TCONS_00127749 TCONS_00127750 1 XLOC_077745 Coding TCONS_00127747 XLOC_077745 Coding Coding EGFR 22:885981-895012 j TSS95491 7038 3 TCONS_00127747_16 131 0.127877237851662 3 0.220930232558139 0.000130167348845635 0.000300983870899949 0.000139968702291736 2.6871699232418e-05 0.000124675452936808 3.79601287168366e-22 0.00022389485936828 5.59873223375367e-09 6.67214646265368e-05 2.70651307506671e-05 6.46428304654522e-07 3.63729082955122e-06 1.4481015551744e-05 0.000173622800443641 6.39072598001953e-05 0.00242964266314914 1.95922340187194e-34 0.00165720770023864 0.000169393270128422 8.64277604158874e-20 0.000125410537367416 0.00202473716010837 0.00074333571722734 0.00203415213882281 0.000279226568875565 0.000162769007387232 1.82915522578423e-58 0.000338010531379379 0.000126219303033322 0.000300009479628608 XM_002696890.2 EGFR PREDICTED: Bos taurus epidermal growth factor receptor (EGFR), 0.0 1.250e+04 99.99 0.985365160556976 XM_005271746.1 EGFR PREDICTED: Homo sapiens epidermal growth factor receptor (EGFR), 0.0 857 75.50 0.177038931514635 TCONS_00127747_1 sp|Q01279|EGFR_MOUSE EGFR_MOUSE Epidermal growth factor receptor; 9e-66 218 77.52 0.992248062015504 0 noncoding 0 0 0 0 0.0319514547375337 0.812693275148345 -0.0331174013493516 0.534346306535937 GTCATTGCCAAGAGCCCTCCTGGACAGCCCTGGTCCGGGCTATCCACTTGCCCTGTGGTCTGGGCCAGGAGTGAGAGCTACCCTCTCAAGGAAGACAGCTTCCTGCAGCGCTACAGCTCAGACCCCACTGGTGCCCTCATCGAGGACAGCATGGACGACACTTTCCTCCCAGTACCCGAATATGTAAACCAATCTGTTCCCAAAAGACCCGCAGGCTCTGTCCAGAACCCTGTCTATCACAATCAGCCTCTATATCCAGCTCCTGGCAGAGACCCTCAGTACCAAAATTCACTCAGCAACGCCGTGGACAACCCTGAGTATCTCAACACCACCCATCCTGCCTGTATCAATGGTGTGCTCGACGGCCCTGCCCTCTGGGCTCAGAAGGGCAGTCACCAATTTAGCCTAGACAACCCTGACTACCAGCAGGCCTTCTTTCCCAAGGAAGCCAAGTCGAATGGCATCTTTAAGGGGCCTGCAGCTGAAAATGCAGAATACCTGCGGGCAGCACCAGCAGGCAGTGACTTTACTGGGGCCTGACCGTGGAGGACAACATCAGCCATAAACTTCCAGCCCCTTCCACCCCCAGGACCAAGCCACGGCAGCTGTTGAGTCCTGACCGCCATGCCGACATTCTCTCTTGGACCCACAGACTGGTTTGTCCATATTTGCCCTGATCAGCCCACCTTTCAACCAAGAAGTGCCCCCGACTCAGATGCGCTTTGCACAGTTGCAGGGACGTTCCTTTGTGTTCAAACTGTGAGGCTTCCACAAAAGGCATCCAGGAAGAATGTTGTCCGTTTGGGCAGAAGTTCACCTTTCAGTGAGGTATATTTGAAAAACACTAAATATGTTTAAGGAGTTTTATTGCTTAGAAACATCTGGGGTTTTTTCACTGACACTGATTTTACTTTTAATGAGCTTTTCTAATAAGGAAAAAGCTTGCTCATAGCACCTGTGGTACTGAGTTGACCCAGGCCCAACTGTGACTGAGACGCACGGACCAGCCTTCCAGCCAACACGTGATTCCATTGGCTCTGCTTGGAGACTCCTCCACTGCAAGTCAGTTGAATAACCAGCCAGTCCTCTGAGTTCTCAGCAGGCCACATTGGTACTATCTCAGATCAAGGCAGGTACAAGACAATAAGCCACTTTGAACTCTTCCTGAGCAAGGAAGAAACAGAGGGAGTAGAATTCTTCCTCAGACTTACTTGTATATAGATGTCTCCATGGTACTTTCTCTCCTTTGGGTGACCAGTGTATTTTAATTATAAGTATTAGACTTGTTTATTTTCCATTCCATAGTTTTGAAACCCAGTATGCTTTCCCTGTACAGCAAAACGGTAACCACGGTCAGCTTATATGTGATTAATCGGCATTCAGACCATTGCCTTTAATTGAGATGGAATGACAGTGCAAAAAAGGAACAAATCCCCCGAATTTGAGTCTTAAAGGAAGTATATCAAGTCTTTGGAGGTCAGGGGACAGGTGTCTGTCTGAAGACTGCATATGTGATGCTGCTCTTGAAACTCTTAGCTCCCCCAACGCTCTCCCCGACACACACACAAAACAATTTGTTTAGGCTACTCCTAGAAGATAATTAATTATTTTACTTCAAGGGTTTTTTACTCAAAGGGCACTTTGCTCTTCACTGGGAAGCTGCCCAGAACCCTGCTTGCCCTTGGTGAGTTGAAGGGTCCAGGCACGGGGGTATCTGTGCAGGAGTGCCTCACCACTACGGCGCTTTTCACAGGCGAAATAGAGACGGCATTATGTGTCATATGAAATTCAGGTAAATATGAAATTTGACTTTGAGGTTGATGATAATGCCTTCATAACATCTCCAGGTATGTGGGAAGAAGAAAACAATCCCCCCTTAAAATAACTCCCTGTAATTAGAAGACCTGCTACTTACGACACAAGCTTTTTCTCATCTGTGTCCCCAAACCCTGAATGTTACATAGTTCTTTGTAGACAGTGTTGTAAACACTCTTAGTCAAGATCCATCTCAGCCAGCAAGAAGTGTTTCAGACAGTATTTTCAGCCCATGGTTTTATTCAGCTCCCCACTTTCCCCCCCCACACAATTTTCCGTTAGCTTTTAAGTTACTTACTGACTCAGGTGGATCAGGGCCCCACAGTTTTGTCATCAAAGTATTTAATTTTGTCTCAATAGAAATATAAGTTATATTCAGCTCCATCATGTTCCACACTTTAACACCTTACCAGCTTGGCATAGGTATTAAAGATAAAAAAAATAAATAAATCATAATACCTGATTCCACAAAATTCACAATTTAGCAACGAAAATTGACTAACGAATACTAACCTGAAAATGACATGACAGATGCCAGGCAAGACTTGTCAGCCCAGCACGGTGACAGCACAGGGCACAGGGCGAGGGGCGCCTGGTGTGGAAGGGCCATGGAGTCAGGTCAGAGGACCCCTAGGGCATCAGCCAGCAAGAATTGGAAAGTGCAGCAGAGGGAGCCCGGCCATGAAAGTGTCCTCCAGAGAAGCTGCTCCTGCAGCAGCTCCGCAGGCTCTGCTGCCCCTTCAAGCCTGGGCTTAGGCTTGGCACATTCCCCAAGTGCCCTTCCGGTCCGTCCCCCCGGGGGGTTAAAAATGATTCATGAAAAGATTAAACAATGTCTCTAAGGATCTGAAGTTTTATGTCCTTGTCAGCAAACCACTCTCATTATTTATTCATCTCAGAACATAAGTGCTTTAGCCAGATATGTATCCAGCACTGAGAGACAGAATGACCCACATTCTGCTCTCACAAGTTTGTCAGGAGACAGTTGAGGAGGGAGCACCACAACATCCTGGTCCAACTGTAGCAGTAAGAGCTTAGTATTTTTGTAATTTGAAATATTTTACTGTAACATAATAAAGTAGAGAGAACTTCAAGATTTTTCTTTTTTGTATTTCAATTTCCTGGCATAAAATCTATTCACTAAATTTTTTTTTTTTTTTTTAATTTTCTTAAACATTGTGTTTCCATCAGTTTTCTCACTGTGTCTGTCCAGGGAGGTTCAGGGGGCCTGTAGACTCTAGGAAGCCTAAGAGAGCAGAGCCTGAATCCAGGTCCCGGGGCCCCCGTGGACAGTCAGGAGAGGGGCTCTCACACCTCAGGGGTCTGAGGGGCCACTCAAAGCTTAACCCTCACCCCTTCGGTTTCTGCTCGTTAACACAAAGCCCTGAGGCCCCACAGAGAGCCTGTCTGCTGTTTTCCTCCGCAGCCAGTCCCTGGAGCATTTCCCCACAGCCCAGTCAAGCCAGGCCTTCAGAAACAGGTCAGGGAAAGAAGAGTGAGAGTGTTTACAGCTGACCCTTGAACCTCATGAGTTTGAATGGTGTGGCTCCACTTAGACATGGATTTCTTCAATAGTGGACACAACAGGCCACATGAGCACCAGTCAGCCGAATTCACCATTAAAGAACCAAAAGCTCTGGACAGCTGACTGTGTACAGTGACAGGCAAGTCCACTGCTCAGAGGTCAGGGCCCCAACCTGGTCTGTTCTAGAGTTAGCTGTCCAGTGGGCCATACATACATATTATCACATAATCTTTAAGGAGGCCCTGTTGTCTCACACTATGAAAAATAGTTCTGTCACCTCAAGATAGAGTTGAATCTTCCAAACTCTAATTTTGCTCAGAGTTCAGTTGTCACTGAGTTACAACTAGGAGCACAGTGGAGGGTGCAGATTACATTCCAGTTGATGGCAAGGCTTAGAGGTCTGTTGAAAGTTCTTAATTTTGAGCTTTAGCCTTCCCCTGTCAAAACTGCAGACATGCATGAACCATGAAGTGCAGAAGCAGACAGGCAGTGGTTCTCAGGCTGACTGCCCTTGGGTGTCTCCTGGGTCCCAACCAAAAAGACTCTGAATTTGTCTCAGCTGCAGCCTGGGCTAGGCGCTTCTGAGAGCTCCCCTGGTGATTCTGATAGGCACCAGAGTTTGGGCAACAGCTGTGTAAAGAAAATGTCCTTCAGGGAGACTTGGGCCTGGACTGACAGCCTCCCACTCGTGCGAAGCCTGGGGCTGCATTCGTGCAGGACAGGCTGTCAGGCCATGGCGACTCACCGTGCTCACCTGCACTGCCCGTCAGGACTGACTGTAAGCTCAAAAGGAGCAGTGTAATCATAATTGCAGGGTCTCCCCGTGTGGTTCTAATGGACAACCAGAGTGGGAACCCTCATCTCTCAGGTCACCTTCACTTGGACTAGCCTATGCATTGACACTGTGCCCTTGATCAGGGCAGAATCAGACTATGTGTGTGGAAGAGGTTCCTGAGGCCGTGCCAGGATGACCACTGTCCTTGGTGTGCCTGGAGCCTCGGCTGCTGTTGGCCGTTCCAAAGCCTCTAATTCCTTGTCACCAGCAGCTAACTCATGCCAACAGTGGCAGATACCCCAAATCTGAGCCTTGAGAAAGCCCTAGACAGTTTCTTTTCTAAGAAGTTGGTTTAAAAAACCCATCTCCTGCTACAGGGAATGAGCTGCTCACCCCAGTGATGGTTCTTGAAGTTGCCCTTAATGTCTGTTCTGCATTTATTACTTGGTGACAAGCACATTTTTTTTTTTTTTCTTTGTCTTCCTTGCTGGGGCTATAAAACCTTACTGAATAGGGTCTCTTGCCTCTAGTCATATCAGCCATATCAGGGGCACACATTTTTATGCTATAAAAGACACATTCCAATAGGATTTTCAAATGTAAGTCTATTTTTGTAACTTTTTAGAGCACTGAGCTTTGTAAGGTATATTTTTAGGAAAACTCATTTTTCTGCTAAAGGAAATAGTTTACTTTAGAAAGACTGCAAGAAAATCAAAATTTGAAACCGAGATTGTTGTTTAAACAATTTTAACATTTAACAGTTTTAATTGTTGTTTAAAGGGATTTAACTGAAGCAAGAGAAAAGTCTCTCTCGTAAAAAGGCACAATGTCATTGCAGAACTGGGCTAGGTTGTTGTCCTGATGAAGAGGAGAATCATTTTTATATTTATAAAACAAGAAAAGGAAACAATTACATTTAGTTTCTTTGTCTGAATCAGGTTCATTTGACTCTGGGGCAATTCAGTGGGAAAGAACCACCGTCTATTACAACTAATAGACAACATCAGCTTCATGCTGTATACCACTCATCTGCCGATGGACTCTGTAAATGTAAGAAAACAATAGCAGAGCTCTCTGTTGGTTTATATATACCAATCTGACTGATGTAGATTATTTTTGTGTTTACAGTTGATAGACATTTACAATATAGACTAGAAATACCTGCAGAGCCCTAATGTGTAGCATGTTTGATGAACACCACCAGCAGTCTTCCAAACTAAGCAGAGCCATCCTAGCGATGGGGTTTTTATCTCAGGCTGCACAGTGACATCATGGCAGTGGGGGAAGGGAAGCTTTTGAAAATCTTGAGGCCTAACAGTGCCTCAGGTGAGTGCAACCCAAGATTTATACTTTGTAAAGCTCCTAAAATCATTCTGATGTACAGCCAAAGCTGAGAACCACCAGCCTAGGGATTCGCCACAGGTGTGTGGACTTGCAGGTAGATTCTCCAAGAGTAGGTACGTAAGCATTGGGCGAACTCTAAGCACAAAGACCCCAGCATCCGTTGCTGCGGGTCAGGACCCTGAATGGATGGGGAGAGGGCCTAATTCATCGATGAAAAAGAAATGTAAAGCAGACCCCTTCTTCCATGTCCTCTGTCAAAGGTAGATGGATAGCAAGCATCCTTGCTACCTGTCAACCATCTGGCTGCCCTGCCTCCAGCCATTGTGCAGCCATCACTGCCCAGGGAGAAAGGAAATGTGGACTCAGAGTTAGTCACAAAGGGAGACGGCAAGGATACGGCATGAGTAGTTGGATGGTGTTTATAAAATAAAAGCCAACAAGAGGATTCCTGCTAAATGTTTTATATATATGACTGTGAAGAAAGCTGAGCACCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGCAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATCCAACCAGTCCATTCTAAAGGAGATCAGTCCTGGGTGTTCTTTGGAAGGACTGATGCTAAAGCCGAAACTCCAGTACTTTGGCCACCTCATGCAAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGAGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGACATGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCATGGGGTCGCAAAGAGTCGGACACGACTGAGTGACTGAACTGAACTGAACTGATATATATATATATATATATATAGGATAAAAACTAAAGCAATAACTAGTATTATTTTCTCTTCACAAGCACAGTATGCCCTCTGAGGTTACAAATTCCTGTCTGAATTGCCATCAGAAGTACTAAGAATCCCTACTCTAATCACCTGGTAGATAAAACTGCATTTTTAGGTGCATTTACTAATTTTTTTCTTAAAGAAATACTTTTGACTTAATTCGGCTACAAAGTAATCTTGCTGTATGATATGAAATTTTGGAAAGGAAGATGTACTGTGGATCTGATGACATATTAGAGGTGATGTAATCAAGTAGCCTTAGGCAGCAGTAATTTCATTTTTAAACAAGCAAGCAATAGCTTTATAGCCTCTAATATATGGTACATTTTAATATTATAAAGTTTTTCTGTGATGAAATCAATATTTGTACAAATAGAAAGCAAGATTCTCTTTTATATGGTTTACACTGTTGATCAAAACATGTTGATTGTATATGGAGTATTAAAAAATTAGATGTATACTATTCATGTTCTTTACTCATAAGTATCTTATAAAAACATTGTATTCTTGTTAACAATGCAGTGTTGATAATAGTTATTAATAATATCTGACCTACTGTAGATGTCCTTTCCTGACAACTTTTTAAAGTTAATTAATAAACTTTATTTTTAGAGCAGTTTTAGTTTCAAAACTGCAAAATTGAGGAG EMBV3_27473 AGAGACTGCTGAGAGCCCAGCTCCGTCTGACTGCTCAGAGAATGCCAGCAATTCTGTCTA Gene GeneID:506943|LOC506943:XM_002693804:134_cdna Constitutive 0 NULL GeneID:506943 15 GENE LOC506943 NULL similar to macrophage expressed gene 1 EMBV3_24709 TGCTGCTTGTCTCTAGCCTCGCTGGTGTGCTGCTCAGTGTTCCTCTCTGTTACTGTTGTT Gene BVV0102_207575 + 0 NULL GK000021.2:45371986-45438012 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121342 TCONS_00121345 TCONS_00121344 TCONS_00121347 TCONS_00121348 TCONS_00121343 TCONS_00121346 TCONS_00119520 2 XLOC_073391 XLOC_072910 Coding TCONS_00119520 XLOC_072910 NonCoding NonCoding - 21:45416822-45423300 - TSS89487 2175 3 TCONS_00119520_1 77 0.0942528735632184 2 0.664505172147599 0.00241932415951045 0.00114462672692619 0.00170178799002644 0.00085986742115481 0.000687323437921182 0.000351469526337893 0.000739075644966684 0.000941371254792664 0.00187607405566141 0.000397466557769717 0.00074006648817778 0.000374947578926891 0.000261801336793774 0.00026118337348837 0.000319032888208458 0.00954231335942495 0.00639969157555875 0.00332230136805237 0.0021451704810479 0.00220097342491448 0.00131588028645064 0.00370321897490362 0.00273325058101452 0.00432217827999199 0.00252541794726116 0.0014562831060199 0.00123506394449635 0.00137383323437182 0.000777822232018271 0.00167802827186629 XM_005206163.1 CBX5 PREDICTED: Bos taurus chromobox homolog 5 (CBX5), transcript 2e-06 59.0 100.00 0.0142528735632184 XM_005267957.1 SNX6 PREDICTED: Homo sapiens sorting nexin 6 (SNX6), transcript variant 0.0 1411 77.71 0.821609195402299 0 noncoding ACTCATTTATACATGTATTTATTAAGCACGCCTCACATCCCCACACCCATAATCGTCACCTCCAGTTTACCCCATTCCGTCAAGCATTCTAAAATGTAAACCAAAAGGTCAGGGGATGTACTTTCCACTGTACTTCCTTCCTAGAAAAAGGCCACCTTGGTAGAAACAGATTAGTTGATGGCTGTGTAGAAAATTGTGAACTTGCTATTTTTTAGCATTAACACAGCATCTTCACATTTCCAAAGCACTGTACCAACATTTATTAATCCTCACAACACCCCTGTGAGGTAGGTCAGTATATCCTTCATGGTGGAGAAACAGGCAAAGAGCTCAAGTGAACCCTATGGTCTGAGGCCACAAGGGCAGCTGGTGAAGGGACTGCCCTTGAATCCAAAGGCTGGGGCCCTCCACCCCACGTTCACCCACTGGTGGGCATCACAGGGGCATATTCTCACCAGTGAAGGGCACAAGGAGGACAAAACACAATCTCTCAGCCAACACAAACATGGACAATTCAAACACACTGAGGAACAACAGTAACAGAGAGGAACACTGAGCAGCACACCAGCGAGGCAAGAGACAAGCAGCAGAGGAAGTCTGGAACCGTAGTAACTAGCCCTGAGACCCAGGCAGGCGGTCTTCAGAATGGTTTGCAAAAACAATTAGGAACACACTGGAGGGGTGACCAACCCAAATGCCTGTGGTTTCTACATGGGAGACAACTTAGAGTGGAAAAATCCAACCACTCGAGCTAATTTTAAACCAGGAATAACATAATGGTCATTCACATTAGAAAGGTCAATCATATTTGTAAAGTAGCTACTGACATTACCTTAACTTTGTACCCTAACTTTTATTCCAAATATTCCAACTTTTCCCCACTGACAAGTACTATTCCCTATAGCAGGCCTCTTTCTCTCTACATACCAATCTATACTCTGGCATATGTCTCATGGTTAATTGGCTGAGCTAGAGGTGGAATCCTGGAAATTAGACCAGAGTCTCTGTTCCAGTTTTACAAACAGCGGTCTCTAACCTGTCTCTGTCCAATTCCATCTTACACAAAGTGCTCAAAGCACCCAGAGAAGCAGTTCATTCTTCTGTAAAGCGGTGAACTTGGTTCCATATGCCATTTTAAAAGAAAGAAAGAAAAGCTAAGACCTGCACTGTAAAAGCATAGTATAGGAGTAGATTATAGCTACTCCAAATTTGAGAGTGATACAATGACCAGAGTTAAAAACTATCACTGTTATCACTGTTTATTTGACAATAGTTGGTTTAGTCTACAAGTTTAAGGCAAACATACTAATGCATTTGCTTTTCTTCAGAAATCATACTTATAAAGAGTACATAAAGCCTGTCCCAAAAGTTCTAAGAAACGTTAATTAAAATAAGTCTGATTAAGATGCTTTACCAGGATACAAGAGTGAACTATGGTGGTGTATAATGGTTTTTTTAAACAAAATTAAAAAAAAAAAAAAAAAAGGTAATGGCAATCCTTATCTTTGTTTAAACCATGTATTTTTGAAAGGGTTAAACTTCAGAAATTATTTAAAGGTAAATAAGATTGGCAGCCAAAAGGAATACTATTCATAAAATAAACAGTTATAGAGGCTACTTAAAAAAGACAGAACTTTGGACTTCTGAAGAGGAGGAGGGCACGATGATGGGCAATTGTCCAGGGCGCAGGTGCGCAGGTGCCACCACGCAGCCCGCAGACCCGTGGGTGGCACTGATCCATTATTTTTCAGAAAAAGGGAGAGGAGATGCACTCTGTCAGCTGTTTCTTTCGTTTCCAGTGAGCAGTAAATGCCTAACATCATTAATAAAAAATAAAATCTGAAGGAAGGCAGCCCTTTTTAACTGGAAGGCAAGAGTGTGGCTTATGTGTCTCCATTGAGCACTGCCAGGCAGTTCTGCAGCAATTGTAGACTACCTTTGCATGCTTCAGTTCTAACTCTGCCAGTTCCACTAAATTTTTTCTGAATGCAGCAACTCTTCTTGTCTTAAAATCTATAAGTTCTGTGAACAAAACAAATTAGGATTAACTACTTGTGTAACAGTATAAAACATACCTGATGACTAAAGGTTAATATAAGAGTACCTTGTTTTGCAGATTCAGATATTTTTTCAAATTTCTGACAACATAACTGTTGGGATGTTTCAGCCTGCAGA TCONS_00121348 TCONS_00121349 r 5' 0 TCONS_00121348 TCONS_00121349 r 5' 0 EMBV3_24687 ACCCAGATTGCAGTGGGTGGAGTGAGTGGCTGGTGTGCGGGATTTTTGTTCCAGAAAGTT Gene GeneID:539264|LOC539264:XM_002689404:29_cdna Constitutive 0 NULL GeneID:539264 7 GENE LOC539264 NULL similar to FUN14 domain containing 1 EMBV3_16478 GAAGGGATGTGAATACAGGGCTCTCATTTGTTCTCGCCAAGGCATTTTCCACAAAGAGTC Gene GeneID:504295|BTN3A3:NM_001034207:3_cdna Constitutive 0 NULL GeneID:504295 23 GENE BTN3A3 MGC127334 butyrophilin, subfamily 3, member A3 EMBV3_00268 TGGTCAACCTTTTACAAACTGGTGGGACAATGGCAGCAACCAAGTAGCTTTTGGAAGAGG Gene GeneID:539383|AMY2A:XM_002686164:313_cdna Constitutive 0 NULL GeneID:539383 3 GENE AMY2A AMY2B amylase, alpha 2A (pancreatic) EMBV3_08559 GAAGTGGCAGAAGTAGGGACACGATTCAACCCATAAGATCACTAAGCCATGTAACCCGGG Gene BVV0102_061730 + 0 NULL GK000006.2:74150496-75189267 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203626 TCONS_00203625 1 XLOC_124214 NonCoding TCONS_00203626 XLOC_124214 NonCoding NonCoding - 6:74256177-74261900 - TSS152483 1367 3 TCONS_00203626_6 119 0.560351133869788 3 0.76162181055575 3.16062058266996e-23 0.000154362134418624 6.76930685424319e-05 0 0 0 1.71387445009181e-09 5.16399728572795e-05 2.88590494016628e-05 0 0 0 0.000737784292098418 1.37632406349804e-05 0 0 0 0 0.000120637098577628 0.00012097694137754 0 0 0 0 0 0 3.80846053488606e-13 0 0 0 XR_229587.1 LOC101905146 PREDICTED: Bos taurus uncharacterized LOC101905146 (LOC101905146), 6e-24 116 68.58 0.285296269202634 NR_033997.1 RNF144A-AS1 Homo sapiens RNF144A antisense RNA 1 (RNF144A-AS1), non-coding RNA. 1e-59 235 77.09 0.232626188734455 0 noncoding GAGGGCCTGCTACCAAGGAGGGAGTTCAAGAGGTGGAAGCTGAGGCTTGAGAGATCAAGAACTTCCTCAAGATCATGCTGCTAGAAAGTGGCAGAACCATCACTGAAATTCAGGCCTGTTTAGGGAAAATGAACTGCTGAGAGGTCTTGCTGGTTCCTGTGTCTCCCTAGTGAGAGGACAGTCACATCAGATGCAGAAGAGCAAGCTCCTGCTGCCTCCCCATTTACCCATGTGCCAAGGTAGGCTTGGGAGTAAAACAGCCCTGTCTGATGGCTTTGCTGCTTGGGACTGGTGCAGCGTGGCCTAGCTATGCTATTTAAAACAATGTTGATGGTAAGAATAATAATAGCCCATAACTATGAGGCACTAACTAGGTTCTCTTCTAAATTATTTAATAATCATAGTAACTAATGCTGGTCTCAGCTGGTTTTCTCAGAAGCCTACCCAAGACTAGTATTTGGTATCAATAGTTTATTTGGGAGGTGAAGAAACCTCAGTAAGGAAATGGGAGAGTGAGATGGGAAAGGGTGGGCAATCAATAAAAGGTGGGTATGCAAACACCAGCTCATGTGCGTCTTGGACTGGCTAAGGACCTCTCCTGGGGAAGATTCATTCTCAGGAACTTCCGCTTTGTGCGGCAGAGACAGAATGACTTTGGCCGCCGGAGAAAGCCTTCAAACAGCTGAAGTTCTGGCTTCTTGCCCCACATTGGCAAGGCCCAAGAGCATGTGGGAGTGCACCGACCCTGAGGAACCAGAGGTCCGGGGAACTAGAGGTACAAGTGACTTGTCCTGGGTCACATGGCTTAGTGATCTTATGGGTTGAATTGTGTCCCTACTTCTGCCACTTCAATTCTTAGGATGAAGAACTAACCCCCAGGACTGCAGAATGTGACCTTATTTGAAAATAGAGTCACTGCACGTGTAATCAGTTAAGATGAGGTCATTAGAATGGATCTTAATTCAATATGACTGTTGTCCTTATGAAAAGGGGAAATTTGGACACAGACATGTACATACAGGGAGAGTGCCAAGTGAAGGTGAAAGCAGAGATCAGGGCAATGCTTCTACAAGCCAGGGAATGCCAGAGATGGCCAGCAAAACACCAGAAGCCAGTGAGAGGCATGGCACAGATCTCTCTCACAGCCCTCAGCACGATCCAACTTTGCCCTCACCTTGCTCAGACCTTCCACTTCTGGAACTATGAGACAATAAATTTCTGTTGTTTAAACCACCCAGTTCCTGGTACTTTGATGGGGCAGCCCTGGCAAACTAATATAAGTGGCAGTTGTTACTTACAGATTGTGATTTCCAGCCCCAGTCAGTGAGTGCAAAGGACACGGTGTAGGAGAGGGAGGAGGAGGATGG TCONS_00205606 r 5' 105722 TCONS_00205606 r 5' 105722 EMBV3_31432 GTAATCCTCCCAAAAAGTGAACAGACAAGTTATAAAATCACAGACTCATTGGCATTGAAC Gene BVV0102_075939 + 0 NULL GK000012.2:28109922-28332634 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036609 TCONS_00036612 TCONS_00036605 TCONS_00036604 TCONS_00036601 TCONS_00036600 TCONS_00036611 TCONS_00036602 TCONS_00036608 TCONS_00036610 TCONS_00036603 TCONS_00036607 TCONS_00036606 1 XLOC_021188 Coding TCONS_00036612 XLOC_021188 Coding Coding PDS5B 12:28330214-28445729 = TSS26609 7290 1 TCONS_00036612_6 1448 34 0.937185103104386 1.42032481262121e-06 0.000519574968030509 0.000118169673360061 1.33927801136404e-10 0.00023703761479073 0.00011395267579724 8.45640240515735e-13 6.33373845618554e-05 0.000691223968624157 0.000301299670338628 1.80685316885917e-07 0.000129126577168368 8.78608285465248e-05 1.33909586471501e-22 5.40418271943177e-05 0.00209169069881402 0.000175864153551222 0.00095552356056561 0.000102473770185669 2.28627706182394e-13 8.29885563206019e-08 0.000515993652833265 1.30236760495733e-21 0.000640088179732069 0.000115240139142949 2.00808842562413e-09 0.000127912122047103 8.63535046693311e-08 0.000407194625503094 1.26783210997168e-07 XM_613447.7 PDS5B PREDICTED: Bos taurus PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) (PDS5B), transcript variant X3, mRNA. 0.0 1.315e+04 100.00 0.999862825788752 NM_015032.3 PDS5B Homo sapiens PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) (PDS5B), mRNA. 0.0 1.023e+04 91.04 0.999451303155007 TCONS_00036612_6 sp|Q9NTI5|PDS5B_HUMAN PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B; 0.0 2844 98.40 0.992403314917127 1 coding 0 0 0 0 -0.0564329134040131 0.744322613674142 -0.015073156297124 0.77189405277321 ATGGCTCATTCAAAGACAAGGACCAATGATGGAAAAATTACCTATCCTCCTGGTGTCAAGGAAATCTCAGATAAAATATCTAAAGAAGAGATGGTGAGACGGTTAAAGATGGTTGTGAAAACTTTCATGGATATGGACCAGGACTCTGAAGAAGAAAAGGAGCTTTATTTAAACCTAGCTTTACATCTTGCTTCAGACTTTTTCCTCAAGCATCCTGATAAAGATGTTCGCTTACTGGTAGCCTGCTGCCTTGCTGATATTTTCCGAATTTATGCTCCTGAAGCTCCTTATACATCCCCTGATAAATTAAAGGATATATTTATGTTTATAACAAGGCAGTTGAAGGGACTAGAAGATACAAAGAGCCCACAATTCAATAGATATTTTTATTTACTTGAGAACATTGCTTGGGTCAAGTCATATAACATATGCTTTGAGTTGGAAGACAGCAATGAAATTTTTACCCAATTATACAGAACATTATTTTCAGTTATAAACAATGGCCACAATCAGAAAGTTCATATGCATATGGTGGATCTCATGAGTTCTATTATTTGTGAAGGTGATACAGTATCTCAGGAGCTTTTGGATACAGTTTTGGTAAATCTGGTACCTGCTCATAAGAATTTAAACAAGCAAGCATACGATTTGGCAAAGGCTTTACTGAAGAGGACAGCTCAAGCTATTGAACCATATATTACGAATTTTTTTAATCAGGTTCTGATGCTTGGGAAAACATCTATCAGCGATTTGTCAGAGCATGTCTTTGACTTAATTTTGGAGCTCTATAATATTGATAGTCATTTGCTGCTCTCAGTTTTACCCCAGCTTGAATTTAAATTGAAGAGCAATGATAATGAGGAACGTCTTCAAGTTGTTAAACTACTGGCAAAAATGTTTGGGGCAAAGGATTCAGAATTGGCTTCTCAAAACAAACCACTTTGGCAGTGTTACTTGGGCAGGTTTAATGATATCCATGTACCAATCCGCCTGGAATGTGTGAAATTTGCTAGCCATTGTCTCATGAACCATCCTGATTTAGCAAAGGACTTAACAGAGTATCTTAAAGTGAGGTCACATGACCCTGAAGAAGCTATTAGGCATGATGTTATTGTGTCTATAGTTACAGCTGCTAAAAAAGATATTCTTCTGGTCAATGATCACTTACTTAATTTTGTGAGAGAGAGAACATTAGACAAACGGTGGAGAGTACGCAAAGAAGCCATGATGGGACTTGCCCAGATTTATAAGAAATATGCTTTACAATCAGCAGCTGGGAAAGATGCTGCAAAACAGATTTCATGGATCAAAGACAAATTGCTCCATATATATTATCAAAATAGTATTGATGATAGATTGCTTGTTGAACGGATCTTTGCTCAATACATGGTCCCCCACAATTTGGAAACAACAGAACGCATGAAATGCTTGTATTACTTGTATGCCACCCTGGATTTAAATGCAGTGAAAGCATTGAATGAAATGTGGAAGTGCCAAAATCTGCTCCGACATCAAGTAAAGGATTTGCTTGACTTAATTAAGCAACCCAAAACAGATGCCAGTGTCAAGGCCATATTTTCAAAAGTGATGGTTATTACAAGAAATTTGCCAGATCCTGGTAAGGCTCAGGATTTCATGAAGAAATTCACACAAGTGTTAGAAGATGATGAGAAAATAAGGAAACAGTTAGAAGTACTTGTCAGTCCAACATGCTCCTGCAAACAAGCTGAAGGTTGTGTGCGTGAAATAACTAAGAAGTTGGGCAACCCCAAACAGCCTACAAATCCTTTTCTGGAAATGATCAAGTTTCTCTTGGAGAGGATAGCACCTGTGCACATAGATACTGAGTCTATCAGTGCTCTTATAAAGCAAGTGAACAAATCAATAGATGGAACAGCAGATGATGAAGATGAGGGTGTTCCAACTGATCAAGCCATCAGGGCCGGTCTTGAACTGCTTAAGGTACTCTCATTTACACATCCTATCTCATTTCATTCTGCTGAAACATTTGAGTCTCTCCTGGCTTGTCTGAAAATGGATGATGAAAAAGTAGCAGAAGCTGCACTTCAAATTTTCAAAAACACAGGAGGCAAAATTGAAGAGGATTTCCCACACATCAGATCAGCTTTGCTTCCTGTTTTACATCACAAGTCTAAAAAAGGACCCCCCCGTCAAGCCAAATATGCTATTCATTGTATCCATGCAATATTTTCTAGTAAAGAAACCCAGTTTGCACAGATATTTGAGCCTCTGCATAAGAGCCTAGATCCGAGCAACCTGGAGCATCTCATCACACCACTGGTGACTATTGGTCACATTGCTCTCCTTGCACCAGATCAATTTGCTGCTCCTTTGAAGTCTTTGGTAGCTACTTTCATTGTGAAGGATCTTCTGATGAATGATCGGCTTCCAGGAAAAAAGACAACTAAGCTTTGGGTTCCAGATGAAGAGGTTTCACCTGAAACAATGGTCAAAATTCAGGCTATTAAAATGATGGTTCGATGGCTACTTGGAATGAAAAATAATCACAGTAAATCAGGAACTTCTACTTTAAGATTGCTTACAACAATATTGCACAGTGATGGAGACTTGACAGAACAAGGGAAAATTAGTAAACCAGATATGTCACGCCTGAGACTCGCTGCTGGGAGCGCAATTGTGAAGCTGGCCCAGGAGCCCTGTTACCATGAGATTATCACGTTAGAACAGTATCAGCTGTGTGCTTTAGCTATCAATGATGAATGCTATCAAGTAAGACAAGTGTTTGCTCAGAAACTTCACAAAGGCCTTTCTCGATTACGGCTTCCACTTGAGTATATGGCAATTTGTGCACTTTGTGCAAAAGACCCTGTAAAAGAAAGAAGAGCTCATGCCAGGCAGTGTCTGGTAAAAAATATCAATGTGAGACGCGAGTATCTGAAACAGCATGCAGCTGTTAGCGAAAAATTATTGTCTCTTCTACCTGAATATGTTGTTCCATATACAATTCACCTTTTGGCGCATGATCCGGATTATGTCAAAGTACAAGATATTGAACAACTTAAAGACGTTAAAGAGTGTCTTTGGTTTGTTCTGGAAATACTAATGGCTAAAAATGAAAATAATAGTCATGCGTTTATCAGAAAGATGGTAGAAAATATTAAACAAACAAAAGATGCTCAAGGACCAGATGATGCAAAAATGAATGAAAAACTGTATACTGTATGTGATGTTGCCATGAATATCATCATGTCAAAAAGCACCACATATAGTTTGGAATCTCCTAAAGACCCGGTACTGCCAGCTCGTTTTTTCACCCAGCCTGACAAGAACTTCAGTAACACCAAAAATTATCTGCCTCCAGAAATGAAATCATTTTTCACTCCTGGAAAACCCAAAACAACCAATGTTCTAGGAGCTGTTAATAAGCCGCTTTCATCAGCAGGCAAACAATCTCAGACAAAATCATCACGAATGGAAACTGTAAGCAACGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAAAAGGGAGGCTTGATAGTTCTGAAATGGATCACAGTGAAAATGAAGATTACACAATGTCTTCACCTTTGCCGGGAAAAAAAAGTGACAAGAGAGATGACTCTGATCTTGTAAGGTCTGAATTGGACAAACCAAGAAGCCGGAAAAAGACACCTGTAACAGATTCAGAAGAGAAATTAGGCATGGATGACCTTTCCAAGTTGGTACAGGAACAGAAACCTAAAGGCAGTCAGCGTGGACGAAAGAGAGGCCATACAGCTTCAGAGTCAGACGAACAGCAGTGGCCTGAGGAAAAGAGGCTCAAAGAAGATATACTAGAAAATGAGGATGAACAGAACAGTCCACCAAAAAAAGGTAAACGAGGCCGACCACCAAAACCTCTTGGTGGGGGTACACCCAAAGAAGAGCCAACGATGAAAACATCCAAAAAAGGAAGCAAAAAAAAATCTGGACCTTCAGCAGCAGAAGAGGAAGAGGAAGAAGAAAGACAAAGTGGAAACACAGAGCAGAAGTCAAAAAGTAAACAGCACCGGACTTCAAGGAGAGCACAGCAGAGAGCAGAGTCTCCTGACACTACTGCAGCTGAACCCACACAGTCCACACCACAGAAGGGACGAGGAGGACCATCAAAAACACCGTCACCATCACAACCCCCCAAAAAGGTCCGTGTAGGACGCTCTAAACAAGCAGCTACTAAAGAAAATGACTCAAGTGAAGAAATAGATGTGTTTCAGGGTAGCTCTCCTGTCAATGATGAAAATCCACAGGAAGAAACAGAAGAAGAGGAAGTCTCTACAGTAAATGTGCGGCGGCGAGGTTCTAAAAGAGAAAGGCGATGAACAGATGCCGTTAATAACTTTCTGTGTGAGAGCTTTGAAAAAAATGGTTGTCAAGCTTCAGGCTGAGTAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTCTGATGACCTCATGTGTCTGTGGTCACACACTTTAGCCATGCGCATGGTGACAACATTGACTATGGAGTCTGTGAAAGAGTCTAATGTGTGATGGCTATGTAGACATAAACTAAAGAAGAAACTTGTAAATATGTTTTTCTTTTTTTTTTTTAAATGTTTCTGACTTCTAAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTGCCCAGCTGTTTATTGGATCTATTGATTTGAAAAGAGTTCTTTAGGATAGATCTTAAGCAGTAATCTGTCAGTGTTTGTATTTGTATTCTCTGCAATTTACTGTGAAAAAAATTTTTTTTCAACAAATGGTGTCATTTTCTTGATGTCACTGTTTGTTGGAGCGTTGAAATGCTCTCTTTCCCGTACGTCTCTTAGCTGGTGTTTACTCCCAGGCATCCTTAATCTGCAGAGGTGCTAAGTGGTCTGCCATCACACCTGAATCATGCCTCTGATGGGAGGACGCCACACAAATGGTGAAACAGTCCTGAAGTTGTTTGATTATTTTACACCTCAGTATTGGTCCCAGAATTTTCTGGCCTGTCATGGCAATGAAAATTTTAAAAAGAGAGAGATTTAAAATATTTTAATTTTAAAGAGTGTGTTATTAAAATAATGTACTGAATTCTTTATCCCGTTTTATCATCCCTTTTCAGTTTTTATTAATCTACTGTATCAATAAAATTCTGTAATTTGTATTAGTTTCTGATAGTCTAGAATGTTATTGTGTATAGATACTTCCTCTTGAACGTTATGTTCAGAAAATGCAAATTATTACACTATAATATAAAATCTGATATATACACATTAGAAATGTTTCGGTTCTCCATAACAGTGTAAAGTTAATCAGAAAGAAAAAAATTTTATTGATGCAGTGTGTCTTTATAAAGCTGTTCTTGAAAGCAAGTGTTTTGTATTTTATAGTGAGTTGCATGTTTATGAAAAAGTGCTGAAAATGGGATGTGCTCTTTTCTGTAAATTCATATTTAGCCATAGTATATGATAGATTGCCCCATAACATAGTTTTTCATCAAGAGTTTATTATTGTACTTTATTTTGGAGCCAAAAATTGTTTTTTGGGGGGAGGGGCAGGGTGGGAGTGATATATCCAACTATATGAGCTACTGTAGGTACCACAGTCTTATGAACTTTGAATGAAATTCCACTTGTCCAGATTGAGAGAAGTGGAAATTTATTTGGGTTTAGAGCATATCTTTCTTTTCTTTGTTGTAATCTACAAAATATAGAAACAAAGGCAGTATCCTTTATACAGTTTTATGAACTGTATTTTCAACCAAAACATATAGGGTATGACTTAATGCTTACCTACATTCATTTTAGTATTTCAGGTGCTGTTCTTTCATTTTTTTCATGGTTACCATCAGAAAAGAAAATCATATTCTAACTTATTTATCACAGTGAATAATGGAGCATTTTCATTTAAATATACCATTATGTTTAAGGTATATTTCCAAGATTGGTTATAATAGATGGGGGATATAATAAAGAAACTACTATTTTGGAAAATGAGGTTTACTATTTTCCGGTGTATACTCACAATTGATGTGATTATTTTTCTTTTAAAAATTTCTTCATGTTTATGAAAGGGCCTTTTATTTTAAAAAAAAGTTTTGAATTGTGTCTTAATCTCTCAGTATTTAACTATTCTTCATTTACAACAGTACTGACACCAGTGATAATGGGAGGCTGCTGTGTATCAAGGCAGCTAATGTTGGACCAATATACAGCTGGTTTTTAAACGTGTCATTAGCTCAATTCTCCCAAACACGCTATTTCTATTTCAGCAGTACAAAGGCATGTTTTTAAATCTATAAAATAAAGAATAAGGGATAGCTTTGTATTTTTGTCTTTGACTAAATTGCACCAGAAATGTTTATGGAAGTATATCCTTAAGACCATTTTATAAAACATAATGAAAAAATGATTGTGGAGGATTTTTATTTGCATGATCATAGTTAACCAAATTTCATTGCACATTTAATTCTGTATATTAGTTCACACAAAATGCTCATTGTAGATTTTGTTCAATGCCAATGAGTCTGTGATTTTATAACTTGTCTGTTCACTTTTTGGGAGGATTACAATGTAAATTTTCCATTTTTCTGTAGAAAAATAGGTGCAATAATGATCAAAGTTTTGATGTCCTGAGTAATCTTAGGGGATTATCTTATTATTATGTTTAAACTTAACATTTCATGTACTAACATTTGGAGAGCCACATACTATAACTAAAGTAAAATTAAGTATGTGTAAAACATTAATTGCTAACAGTGGTTAGCAAACTCTTCAGTGATAATGTTCATTTTGAAAATATGTACTGTATAAAATTAAGAAAATATTTAACTCATTGTAACAAGTTCCACTATGAAAATCTTACGATTCTTCAGTGAGGTTATCTTGCTGCACTCTGTAGCAAATCCATTTAATCTACATTATAATAAAATTTCTTGCTGCAGTGCAACAGGAAGCTTTTTCAGTGATCTCCACTGTATATGTAAATTACAAATGTGGCTGTACAACTTGTTCCAGGCATTAAAGGTTAAATTACATTCTGTATTTTCTTACAACTTGTTAAGTTTGATTTTTAAGATTTCCTTTTGCCCACTTAAAGAATGTCAGGAATTTAAGAATTTGTTTAACTTAGGCATATGTCCCCTACCATATAGTATTATGTCACCATAATGAACAATTGGTATTTAGGTAGATAACCAATTTTCAGACACATTTTTGGATTTTCTGTGAAGTTGAATAAACATGGAAGCTAATATA EMBV3_27531 TATTCTGAAGCGCATTTTGGAGGACAAGGAGGAGAACCCACTCCCCGCCGCACTGGTTCA Gene GeneID:616120|PGLS:NM_001038580:122_cdna Constitutive 1 NULL GeneID:616120 7 GENE PGLS MGC134520 6-phosphogluconolactonase EMBV3_27754 CCACGCCCATGCTTCAGAGAGAGACCTGATGAAAGCCAGAGTAGTGTCTGATACCTGCAA Gene BVV0102_036939 + 0 NULL GK000024.2:50737115-50786811 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139265 1 XLOC_084850 NonCoding TCONS_00139265 XLOC_084850 NonCoding NonCoding - 24:50764498-50767049 - TSS104189 1784 2 TCONS_00139265_2 96 0.444506726457399 3 0.30156862745098 0.00450371632063376 0.0042873977430605 0.00751241148494439 0.0028990334516893 0.00412620687741965 0.00180369868754833 0.0011611469378304 0.00075351783392287 0.00066688689170229 0.000673441759289451 1.41135962212872e-05 0.000509094653893836 0.000136708529603274 0.000100197279731188 0.000220006556380211 2.2997084368822e-10 0 0 0.00548003780560924 0.00686386457430655 0.00441636216944037 4.61711173649919e-06 0 1.87944456790675e-05 0.00743378874069605 0.00309161877279887 0.00300680893424875 8.71700994063135e-06 1.44798552165484e-06 0 XM_005221819.1 C21H15orf40 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf40 (C21H15orf40), transcript variant X1, mRNA. 2e-57 228 85.79 0.10762331838565 0 noncoding 0 0 0 0 -0.487751370473775 0.0132926540251143 -0.135702376447379 0.0408314304464886 CTTCCCAACCCAGGGAGCAAACCCAGGTTTCCCACATTGCAGGCGGATTCTTTACCAGCTGAGCCACAAGGGAAGCCCAGGCTGGCGTGGGTAGCCTATCCCTTCTGCAGCAGATCTTCCTGACCCAGGAGTCGAACCGGGGTCTCCTGCATTGCAGGTGGATGTTTTACCGACTGAGCTAGGAGGGAAGCCAGACAATAAAAGCGGCAGACATCTGGAGGTAGAGATAACAGGTGATGAGCAAGTACCCATCTGAAGCATCGCCTGTCCCTCAGCTCAGGTCAGACCTCTCCTCCCTCAGTGCCTGTTTCCTGGCCTGCAAAACCAGGACAACGTTAAATCACTTCACTTATTCCCTCCATGAATGAGTATAGAGTCAGGCCCAGAGACTGGGGCCAAGAGCTAGGAAAACGAAATACTACAGCCCTTCAACTAAAAGCACCTGTGCCTCCCTATTGAGCCGTCTTCTGAGCTTGCAGAGGGCCTTCACGTCTGACCCCACCCAGCCCGGGAGGAGGAAACCTCCAGATGAAAACTCCAAGGATGCGGGGCTTCAGTGCTCTGTCCACAGCTCCATAACCACTCATGGCTGGACCGGGCTATGGAATTGGGTCTCCAAGGCATGTAGTTATAGTGAGAAGACGGCCATCTGTGAGGAAGTGGGTTCTCACCAGACACCCAACCTGCGGCACCTTGACCGTGGACTTCCATCCTGCTCATCGGAACCTGTGTCCTTGGAGAACTGAGCTTCCATGCGTGAAATCCCACTCTCCTAAGATGACATCCCCGAGAGACCATGTGGCAAGCTCTGGATGGCAGCCCCCGCCACGCCCATGCTTCAGAGAGAGACCTGATGAAAGCCAGAGTAGTGTCTGATACCTGCAACTTAATCTGCCTGGGGCAGAGTCCACTCACCCTGCTTAGATAACTGATCAAACCTGATGCTGATCCATTTCAGAGACCGCATCCCAGCCTTTTCACTGATTCTCTGTGCTCCCCAGAACTCTTCCAGTAAATGCCCTTTGCTTTGCCAAAATTGCTTTCTGTTGCTTGCAACCAGAAAACCCCAACCGAAATAAAAGTTAAGTTGCAAATTACAAGGATATGTTCTATTTAATCCCATGTTTGAAGAACTCACTTTTCAGATGATCAACAGTGTAGAAAAGAATGATGATTTCCATAGGATGGAAAGATGTAATTAGGAATTTTTTTTTTTTGGTCTTTAGGAGTGGCTTTTTTGTATTGAAAAGAATATTCAGGAGCTACTTTGTACTTAAAGTTAATACTCAGGTAATTCAAAGCCTTGGTTTTCTTGAAGTTTTTAAGTTCAATTTAGAAATAAGTTCTATTTATAAATCTTTCAAATTTTCACAAATGATTTTAAGAACACTTTCATAATTTAATTGAATTCCTTTAAATATTTTTAGCTGTACTGATAAAGCCAGCACACTCAATTTCCTTTTTAAAGTAAGTCAGTGGCTGGCAAACCGAACAACTTTTCCAAGTACCTAAGAAATTCTTAGAAATCTAATAAAATTTATCGAGATGATGATTAAACTCTTCTACATATTCCTATGTTGTTTAAAGACTAAAGCTGTCTTGGACATTTCAGCTTAAAATCTAGATGAACTGCTCAGTCCTCTAATAAGCCAAATTCTCCAGATTTTTTGCACTAGTCACTGCTGGGGCCCAGCTTTGCACAGACGAGGCCTGACAGCATCTCCACCTGCAGTTCCTTGCTTTTCACCCTTGTCTTGCTCCTCAGTTCCAAGGCCAAGGACCCC TCONS_00140547 TCONS_00140549 TCONS_00140548 r 3' 18172 TCONS_00140547 TCONS_00140549 TCONS_00140548 r 3' 20722 EMBV3_24295 TTTGGCCACTTCCATCAGGGCCGTGGACCGAGCAGTGGAGTCCATGCTTCAGGCTGGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07206 GGACAAGGTTCTGTGTTCCAGTGCAGAATCCTACTTCGTTTGACTTTCGGACCTGGACCT Gene BVT0102_431354 - 1 EMBV3_16081 GK000005.2:112607539-112612769 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13329 GGCCCTAGCCAGGCCCCAAGATGTGTGCATGGAGACAAGGGCAGATTTTACTGTCATTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22181 GGGGAGGCAGTGGGGACAGTCCAGCTGGTCAGACTGCGCTCCCAGTGCCGAGGGCCTGGA Variant GeneID:615953|CENPM:NM_001038686:204_cdna 733^955 1 EMBV3_22924 GeneID:615953 5 GENE CENPM MGC134606 centromere protein M EMBV3_06829 GAAGGACTAGACCCAGATCTTCTTGAGAGGCCAGATGCTCCAGTGCCTGATGGTGAAGGT Gene GeneID:613720|CCDC53:NM_001080313:52_cdna Constitutive 0 NULL GeneID:613720 5 GENE CCDC53 MGC151927 coiled-coil domain containing 53 EMBV3_15910 CCCCCATCTGCTCTAGTGGTTGAAATCAAAATTATACTCTCCTTAACCATTTCTTTAGGA Gene GeneID:526961|LRRC40:NM_001103262:43_cdna Constitutive 0 NULL GeneID:526961 3 GENE LRRC40 MGC155107 leucine rich repeat containing 40 EMBV3_32201 AGTATCAGTCAGATGAGCGGGCAGGTGTCACGAGACTCAGCTGGCGAGTATCAGGCAGAT Gene BVV0102_020685 + 1 EMBV3_38538 GK000007.2:44010127-44057896 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161435 TCONS_00141899 TCONS_00161432 TCONS_00143621 TCONS_00220698 TCONS_00161434 TCONS_00241759 TCONS_00161433 TCONS_00143615 TCONS_00143618 TCONS_00007875 TCONS_00161436 TCONS_00143622 TCONS_00022498 TCONS_00143620 TCONS_00143617 TCONS_00119386 TCONS_00119385 TCONS_00141900 TCONS_00220697 TCONS_00220699 TCONS_00119383 TCONS_00143614 TCONS_00161431 TCONS_00143619 24 XLOC_098326 XLOC_086326 XLOC_098323 XLOC_088042 XLOC_134015 XLOC_098325 XLOC_148423 XLOC_098324 XLOC_088036 XLOC_088039 XLOC_003435 XLOC_098327 XLOC_088043 XLOC_013168 XLOC_088041 XLOC_088038 XLOC_072891 XLOC_086327 XLOC_134014 XLOC_134016 XLOC_072890 XLOC_088035 XLOC_098322 XLOC_088040 NonCoding TCONS_00141899 XLOC_086326 NonCoding NonCoding - 24:24861532-24862670 - TSS106110 1138 1 0 0.00132518225739355 0.000271351682914283 0.00038116856358547 8.33090922154434e-05 0.000179562222282472 0.00134282338898988 0.000132475609405257 0.000861687814352093 4.09396664004371e-05 7.32148482460523e-05 0.000296081943755115 2.09336009144352e-05 7.27126472759072e-05 0.000836192561836734 9.01450796602426e-05 0.00070063089693128 0.000745872616198194 5.87955415521431e-05 7.00148769060103e-07 0.000575016577542355 3.28761427271939e-05 0.000419784658255556 0.000166694994113643 0.00251986048606475 5.61598708660892e-05 0.000887439544128711 0.000370697926167029 0.000643062092308777 0.000162639531543882 3.64790387306044e-05 0 noncoding NNGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTGATCTGGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAACGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGACCGGGCAGGTGTCGTGGGGCTCAGCTGGCGAATATCAGGCAGATGAGCGGGCAGGTGTCGCGGGGCTCATCTGGCGAATATCAGGCAGATGAGCGGGCAGGTGTCGCGGGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGATGTTGCGGGGCTCAGCTGGCGAGTATCAGGCAGATGATCGGGCAGGTGTCACGAGATTCAGCTGGCGAGTATCAGGCAGATGAGCCGGCAGGTGTCGCGCGGCTCAGCTGAGGAGTATCAGGCAGATGAGTGGGCAGGTGTCGCGCGGATCAGCTGACGAGTATCAGGCAGATGAGCCGGCAGTTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGGATCAGGCTGATGAGCGGGCACGTGTCGCGTGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCACCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCCATTGGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGCGGGGCTCAGCTCGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGTGGGGCTCAGCTGGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGCTCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCCGGCAGATGTCGCGTGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCCGGCAGATGTCGCGTGGCTCTGCTGGCGAGTATCAGTCTGATGAGCGGGCAGGAGTCACGCGGTTCCGTTGGCGAGTATCAAGCAGATGAGAAGGCAGG TCONS_00138667 TCONS_00138672 . 3' 73776 TCONS_00138667 TCONS_00138672 . 3' 74913 EMBV3_32165 ACTAATGATTGAAGGATGCAAAGAGTGACTTTTCTGGGCTCCTGACTGAGCACACCTCAG Gene GeneID:514277|TMEM138:NM_001098967:85_cdna Constitutive 1 NULL GeneID:514277 29 GENE TMEM138 MGC157057 transmembrane protein 138 EMBV3_13243 AGCGGGAGGAGGTCGCGGCGGCGGGAAGATGGCGCCTTCTCCCACCAAACGCAAAGACCG Variant GeneID:504506|RNPS1:NM_001101841:57_cdna 47^234 1 EMBV3_13673 GeneID:504506 25 GENE RNPS1 MGC166060 RNA binding protein S1, serine-rich domain EMBV3_13657 GAAGTTTCCCTTGGTAATCCACATGTTATTGTCCTACTGTGATGCTGCGTTGTTTGACGG Gene GeneID:532062|PNMAL1:NM_001102512:298_cdna Constitutive 0 NULL GeneID:532062 18 GENE PNMAL1 MGC166087 PNMA-like 1 EMBV3_42453 CCCGAGAACACGCTGGCGGCCATTCGGCAGATGAGACAAACAGATCAGAATGTAGTAACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21684 TCCGAGGCCGCAGCTTTCATGATGAACTTAGCTTGGATAACACCCTTCCTCCAGTGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19253 GAACCTTGAAGATGAGGAGCATGGTGGCCAGCCATCAGAAGTTGACAACGATCAACTGAG Gene BVT0102_215345 + 0 NULL GK000029.2:12156525-12247389 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164515 TCONS_00078578 TCONS_00164516 2 XLOC_100248 XLOC_047466 Coding TCONS_00164516 XLOC_100248 Coding Coding - 29:12170130-12177753 - TSS123087 1214 1 TCONS_00164516_1 116 0.110378912685338 3 0.841117816845972 0.00108655315068803 0.000364135592929445 0.000529395561486519 0.0002459277199098 0.000162475195486267 0.000185489905387258 0.000211351717298679 0.000214359985311238 0.000643323246183242 0.000157435151529147 2.18284496353629e-06 0.000104421806725568 0.000687666527861244 1.14517626534415e-05 0.000458554793359851 0 0 0 0.000413195701839627 0.000248515184733876 0.000158041792792979 0 0 0 0.000514792339200601 3.45046614655894e-05 0.000153896190284281 0 1.17979068479078e-05 0 NM_001083726.1 LOC534913 Bos taurus mariner-like transposase (LOC534913), mRNA. 0.0 939 79.72 0.852553542009885 NM_001243723.1 SETMAR Homo sapiens SET domain and mariner transposase fusion gene (SETMAR), transcript variant 2, mRNA. 0.0 1070 83.03 0.845140032948929 TCONS_00164516_1 sp|Q53H47|SETMR_HUMAN SETMR_HUMAN Histone-lysine N-methyltransferase SETMAR; 8e-10 57.0 38.26 0.931034482758621 0 noncoding 0 0 1 1 -0.19939044515691 0.247330393840372 0.0301486039971032 0.549208279694978 CACTTTCAAGGCAACCAGTTCTTAAATGACCAAGACTAAAAGCACTCACTCTCTTGCCGGGCCTTTGGCAGCTCCCCACCCCCGCCCCGCCAAGCAGTAAGGTGCGGAGGCTCCGCGCGAAGGACAGCAACATGGGACGATGAAGGGCTTCCTTCCCACTGGCACTGGCAACGGTCAAGACAACGGAAATGATGTTAGACAAAAAGCAATTCAAGCTGTTTTGAGTTAAAACGGGTCGTAAAGTAGTGGAGAGAACTTGCAACATCAATGATGCATTTGGACCAGGAACTGCTAACGAATGTACAGTGCAGTGGTGGTTCAAGAAGTTTGCAAAGGAAACAAGAACCTTGAAGATGAGGAGCATGGTGGCCAGCCATCAGAAGTTGACAACGATCAACTGAGAGGATCATCAAAGCTGATCCTCTTACAACACACGAGAAGTTGCCAAAGAACTCAATATCAACCATTCTATGGTCATTCAGCATTCGAAGCAAATTGGAAAGGTGAAAAGGCTCAATCAGTAGGTGCCTCGTTAACTGACCAAAATTCAAAAAATATCATTTTTAAGTGTAGTCTTTTCTTATTCTACACAACAACAATGAACCATTTTGATCGGACTGTAACATGTGAGGAAAAGTGGATTGTGTGACAACCAGCTCAGCGGCTGGACCCAGAAGAAGCTCCAAAGCACTTTCCAAAGCCACACTTGCACCAAGAAAAGGTCATGGTCACTGTTTGGTGGTCTGCTGCCCATCTGATCTACTACAGCTTTCTGAATCCCAGGGAAACCATTACATCTGAAAGGTATGCTCAGCAAATCGATGAGATGCACGGAAAACTGCAATACCCGCAGCTGGCATTGGTCAACAGAACGGGTCCAATTCTTCTCCATGACAACACCTGACCACACATTGCACAACCAATGTTCAAAAGCTGAATGAATTGGGCTATGAAGTTTTGCTCCGTCTGCCTTATTTACCTGACCTCTCTCTCGCCAACTGACTACCACTTCTTCAAGCATCTCAACAACTTTTTGCAGGGTAAATGCTCCCACAACAGCAGGAGGCAGAAAATTCTTTCCAAGAGTTCACTGAATCCTGAAGCAGGGATTTTTATTTTACAGGAATAGACTTACTTCTTGCTGGCAAAAATGTGTTTATTGTAACGGTTCATACTTTGATCAATAAAGATGTGTTTGAGTCTAGTTATAATGA TCONS_00163084 TCONS_00163090 TCONS_00163091 TCONS_00163092 r 3' 13454 TCONS_00163084 TCONS_00163090 TCONS_00163091 TCONS_00163092 r 3' 14488 EMBV3_33181 TGCGCAAGGCTGGCACGGAAAACTGTGACATCTATCGTTCAGTGGACCTGGCGTTTTACA Gene GeneID:527744|LOC527744:XM_002694482:331_cdna Constitutive 0 NULL GeneID:527744 17 GENE LOC527744 NULL similar to G protein-coupled receptor 109B EMBV3_12524 TGATGGAGTGACCTCTTGGCTGAACCCATTAGGACTTGAGGACTGGAGTCTGGGCCATCA Gene GeneID:614927|IL27:NM_001164653:407_cdna Constitutive 0 NULL GeneID:614927 25 GENE IL27 NULL interleukin 27 EMBV3_34506 GTGGGCTCCGAGGAGGAGTTCTATGACTGTCCGGATTACTACTACTTTCGCGACTTCCCA Gene GeneID:614047|LOC614047:NM_001040574:386_cdna Constitutive 0 NULL GeneID:614047 25 GENE LOC614047 MGC133674 hypothetical protein LOC614047 EMBV3_34375 GAGTGCCTGTCTCTGAAGGCTCGTCTACATGGGAATACTGGAAACCCGCTTAATTTGCAG Gene GeneID:514374|PIGY:NM_001038102:174_cdna UTR3_Alt 1 NULL GeneID:514374 6 GENE PIGY MGC134017 PREY phosphatidylinositol glycan anchor biosynthesis, class Y EMBV3_01020 ACGGGACCGGTGCTGGCCAAACTCCACCAGGTCGTGTACTACTCAGAAATGCACAAGATC Variant GeneID:507115|BIN3:NM_001075299:61_cdna 562^696 2 EMBV3_33250 GeneID:507115 8 GENE BIN3 MGC140433 bridging integrator 3 EMBV3_22573 GGCTCGGAGAGGCGAAGGACTAGGACACGTTGTACCTGCTTGGTTTTTCCAGATTACGAA Gene BVV0102_055236 + 0 NULL GK000002.2:4333330-4383953 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107236 1 XLOC_063147 NonCoding TCONS_00107236 XLOC_063147 NonCoding NonCoding - 2:4380293-4382115 - TSS78857 1822 1 TCONS_00107236_1 65 0.0543358946212953 1 0 0.00095583281720262 0.000363994381604032 0.00131039128967213 0.00148125252608953 0.000205941184509198 7.46037794448212e-05 0.000201645282937015 0.000999853537357987 0.000398403880007812 0.000137751606942983 0 1.9625043518067e-06 2.04723855857364e-05 0.000942349363232635 0.000366214694582231 0 0 0 0.00088947870799319 0.00269185634881873 0.000916380333712698 0 0 0 0.00106855226686617 0.000618702776981174 0.000328009126002629 5.79895543039624e-05 2.93088235206035e-05 0 NM_001098131.1 RPL22L1 Bos taurus ribosomal protein L22-like 1 (RPL22L1), mRNA. 1e-15 89.7 83.33 0.0455543358946213 0 noncoding 0 0 0 0 0.388463069743626 0.404205703724717 0.06718058496599 0.349610912848443 GGCAAAGCTTGAGCAAAAGCTTGGAAGCCAAGCTGTGTGGAGAACAAGTGGAAATTATGGTTGAGACAGTACTCAACCATACGTGAGAGGCAGGAGGGACTAAACTCAGCCTTTGATTTGGGTTTAGGGATTTGGAATATTAATAGATTCTGAAGTCACTGGAACATCATGGATAGGAATAACAGATTCAGAGGAATGCTTTAGAAAAAGAACTCTATGGAGGACAGGTTGGGGGTAGGAAGAGATCTAAGTGGAGGCAACACTAGTAAAGTCCAGACAGGAATTAATGAAACGTTGAGCCAAGTCTATGAATGCAACAGGAAAGGAAGTACAGAAATCCACAGGCTGACTCTGGAAGATGGAAGAGTGGAAACCAACAAGAATAAAACCAAAGGCAGAAAGGATGGATGGTGATGCCATTGCCATTAACCAAACCCAGAAATCAGGAGGAGTACAGAGGTGAGGCAAATCAACAAAAGTGTCCAATATGTTAAGTCTCAGAGGTTTGTAAGACATATTTATTGACCTGTAGGTGTACAAATCATGAGAGAGGTCACCAGGTCAATCAAACTGAATCATTTTTCAAAATGATATTTGAAACTGTAAGGGTGCATTAAACTAGTCAGGAAGATGGCACAGCATTGATAGAGGGCTGGAGCCTTGGAGAATGTTGTACATGTGAGAAAAGACAAGGCGTAAAGGAGCTTAATAGAGACAGAAGTAGCATCAGGAAAGAGTGTGTTTCTGGAGACCAAAGGAGTTTATAATTGATTTACAGTGTTGTCAGATTTTTTTTTTTTTTTTTTTTGGAGTATAGTTGATTTACAATGTTGTGTTAGTCTCAGGTGAACAGCAAGATGATTCAATTACACATATACATGTATCTATTCTTCAGGATTCTTTCCCCATAGGGAAGAAGATTTTAAGGAGGAACTACTGTTGGTAAACTAGACAAGCTGAGAGGTGAGAGGGTCACTGGAAACTTAGGGGGAGCAGTTTGAGAAGCAGTGGCAGAAGCAGAATCAACTGCCTAAGGAGAGGAGGCTAAGGTATATCACATCAGTTACTTTTAGAAGAAATTTGAGAAGGGAAGAGAGTGAGAAACGAAAGTGGCTTGAGGAAGGACAGGGGTATTTTAGGTTCATTCTTGTAGCCACAAGCTACGCTCTTCTTGGCAAGAACATAGCTGTGCATGAAAGGAAGAAGGATGTGAGCCCTTTTTATTTCTTAACACAAAACTCCAGACCTAAATTACCATCTGGGAAGGAAGGAGGGAAACATGATCTCTATTTATCAGACTTAGATTTTGCTTCGGCAGTTTTGTCTAAGTCTTGCACAGCCGTATAAACGCCATCCCTCCACTCTAAATAAAACAACAAACCACCACCACTCCCTCCGCTTCTTCGTAATCTGGAAAAACCAAGCAGGTACAACGTGTCCTAGTCCTTCGCCTCTCCGAGCCGGCTTTAAACCTGAGAGTGCTCAGCTCAGCTCTCTGGTGGGTCCGGCCCGATGAGCAGCTCCTGACGCAGAGTCCAGCGTAAACCCAACAGAGTCGCTCCAGTTTCTTGCATCTGATCCTCCCACGACGCTAAGGCTTCGCGGGCCATGGCCTCGGTGCGAACATCAAGTACAGTTAGAAAACCCCTCGGCCCTGCCTGCAGCTCCTTCGGCCCACTGTAGTCGGCCTCCATTACTCTTTTCCCGCGAGGCACCTCCCTCGAGAAAATGAAACCTGGTGCCATCAGCTGAAGCAAAAGGGTGGGACCTTTTTACTAGGCACACGGAAAAGCAGAATCGACTTCAGACAGCAAAGGGGTGT TCONS_00101483 TCONS_00101484 . 5' 1655 TCONS_00101483 TCONS_00101484 . 5' 1655 EMBV3_04272 CCCAAATCGGAATCAGCAGGATCGGGCCAAAATGGCAGTGATTGAGTACAAAGGGAACTG Gene GeneID:506988|MRPL17:NM_001034274:16_cdna Constitutive 0 NULL GeneID:506988 15 GENE MRPL17 MGC127549 mitochondrial ribosomal protein L17 EMBV3_06314 AAGAAGGCCGAGGGCACCGTGTTCACCGAGGAAGACTTCCAGAAGTTCCAGCGGGAATAT Gene GeneID:509108|RPS19BP1:NM_001098916:34_cdna Constitutive 0 NULL GeneID:509108 5 GENE RPS19BP1 AROS S19BP ribosomal protein S19 binding protein 1 EMBV3_25383 CCTAAAGACTTCCAGCAGCTGTTGGGAGAGGAGGCCGCTTTGGCCCCTGAATTTCTGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39685 CCTGCACTCAGGCTCACGATGGTGCTCGGTAAAGTATGAGATGATGAAAATGGCCCTCTG Gene BVT0102_105089 + 0 NULL GK000015.2:56736526-56827091 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30869 TGTCATCGTGTTTCAAACGTTCCAGTAATGTGATGCTTCAGGTCTGTTTTTCTCCTGGAG Gene GeneID:404143|GHITM:NM_001034052:254_cdna Constitutive 2 NULL GeneID:404143 28 GENE GHITM MGC127644 growth hormone inducible transmembrane protein EMBV3_20935 AAGTTGTCCAAGAACTTGCTGCGCATGAAGGAGTTTCATTATAGAAGAGCAGAGTTTCTT Variant GeneID:512508|MPHOSPH6:NM_001075564:35_cdna 84^196 1 EMBV3_30586 GeneID:512508 18 GENE MPHOSPH6 MGC134393 M-phase phosphoprotein 6 EMBV3_18114 ACAGTATCAGCGTGATCTCTGGAGGAGCTGGAAACTAAGATCAGCCGTAAGAGCGGTGAT Gene GeneID:511125|RNF135:NM_001098936:241_cdna UTR3_Alt 2 NULL GeneID:511125 19 GENE RNF135 MGC159982 ring finger protein 135 EMBV3_30040 TAGTGCTAAGTGTGAACTGGACCCTGTTGCTAAGCCCCAGCAAGCAATCATCCTAGGTAG Gene GeneID:100138864|LOC100138864:XR_083821:26_cdna Constitutive 0 NULL GeneID:100138864 13 PSEUDO LOC100138864 NULL similar to Eukaryotic initiation factor 4A-II (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) EMBV3_23260 TTGTTACTGAAGGATCACATTTTGTTGAAGACAGTTAATCAGCTGGCCCACGCCCTTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23547 GAGGCTGTTTCCTAGGTCCTGTGGTAGAGGTTTGGCTTAAAATGGGGCTTTTGAACGGTC Gene GeneID:100125936|CSMD3:NM_001105499:2_cdna UTR3_Alt 1 NULL GeneID:100125936 14 GENE CSMD3 MGC148935 CUB and Sushi multiple domains 3 EMBV3_42213 TCTGACGCCCTTTGTCTCAGGGGCCCTCCCTTAAATACCATCTTCAGGGCTTAACATAGA Gene BVV0101_035747 + 1 EMBV3_29881 GK000002.2:116647703-116691054 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111831 1 XLOC_067731 NonCoding TCONS_00111831 XLOC_067731 NonCoding NonCoding - 2:116667968-116668285 - TSS83452 317 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000916491494762543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.113824740192055 0.392163695374855 0.0148986234661551 0.761986106692376 CAGCCACTGCCACAGCCACCACTGCAGCCACCACAACTTCCACAACCACAGCAGCCCATGGTGAGGACTTGGACTCAGGAGAGGTGAGGAGGGAGACTCAGGAAGGGAGGGAGGTCTGACGCCCTTTGTCTCAGGGGCCCTCCCTTAAATACCATCTTCAGGGCTTAACATAGAGCAAGTGACCACTTCCTTTGTTATGGTTTCCACCAGGTTCCTCTGGAGAGTTTCACCAGACCTCGAGGCTATTTCCTTGTGAAACATCGCTGACCTCATCCAACTGCTTATTTTAGCATTGACCCCTTCCTCGGGTTATGCTT TCONS_00106324 . 5' 12841 TCONS_00106324 . 5' 12841 EMBV3_37497 TGTGTTTGGAATTGCTCTCTACAAGAAAACTTGTGTTTGGAGGGTGTGCCAATAACCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25920 AGAACAAACAGACCCAGTCCCACCCTCAATTTGCTTCCAGCGTAGCAGGGAAGAGACTGT Gene BVV0102_271115 + 1 EMBV3_11781 GK000023.2:25051795-25066914 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07816 TTCCTGGAGAAGAAGGGACCCCGAGATCGGGTAGAGAGCCTGGAGTCTCGGGAGATGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43301 GTAGGTTGTGTTGTTTAGTAATTATTATAAAGAGCTAAGCACTTCCCTTCTAAAGTCTAC Gene GeneID:100313286|MIR2354:NR_031071:41_cdna Constitutive 0 NULL GeneID:100313286 2 GENE MIR2354 bta-mir-2354 microRNA mir-2354 EMBV3_16993 GGGACCTTAAAACGACAGATGTGGTGGTTCAGGGTAGGAATAGAGGCTAAATCCATCTAC Gene GeneID:509972|LOC509972:XM_002687834:156_cdna Constitutive 0 NULL GeneID:509972 5 GENE LOC509972 NULL similar to C-type lectin domain family 2, member d11 EMBV3_06980 CCAGGCCCCTCCATCCATGGGACTCTCCAGATGAATTGTAGGAGTATCAATTGCTTCAGA Gene GeneID:513649|CCDC43:NM_001098962:239_cdna Constitutive 3 NULL GeneID:513649 19 GENE CCDC43 MGC159622 coiled-coil domain containing 43 EMBV3_21630 ACAATCACTGCCTTTTGTGATGAAGGAACGATGACTGAGTAGGCAGAACCGACAGCCCAG Gene BVV0102_237963 + 0 NULL GK000001.2:63482059-64147427 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19707 TGATCCACAGGGGTAGATGCAAGCAGATCAACACCTTCATTCACGAGGATCTGGCCACCA Gene GeneID:517093|LOC517093:XM_002690740:460_cdna Constitutive 0 NULL GeneID:517093 10 GENE LOC517093 NULL similar to ribonuclease 4 EMBV3_16385 ACCGGGGACAGATGTCCTTTTGTATAGAACAGAATTTATAGCTAAATACTTTTCATTTTA Gene GeneID:538949|ESCO2:NM_001101182:61_cdna Constitutive 3 NULL GeneID:538949 8 GENE ESCO2 NULL establishment of cohesion 1 homolog 2 (S. cerevisiae) EMBV3_12251 GCCAAGACTGGGTGAGGAATGTAAATGTCCCCTTGCTATTCGGAGGTTTGTTTTTCCCCC Gene GeneID:504407|SPSB1:NM_001034209:25_cdna Constitutive 0 NULL GeneID:504407 16 GENE SPSB1 SSB1 splA/ryanodine receptor domain and SOCS box containing 1 EMBV3_24345 TGCATTTGTTCACTTTTGTAACACTGTGTCCTGGGGATGAGCTGGAGAGGAGGTGTTGGG Gene GeneID:529661|TSKU:NM_001103268:38_cdna Constitutive 0 NULL GeneID:529661 15 GENE TSKU MGC165974 tsukushi small leucine rich proteoglycan homolog (Xenopus laevis) EMBV3_30143 CACAGGTGAAACAGACAACCCTGCTGGACAGACTGGTGTTCCAGGCACAGAGCACTCTTT Gene BVV0102_127704 + 0 NULL GK000019.2:15015413-15026363 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092385 TCONS_00092383 TCONS_00092384 TCONS_00092387 TCONS_00092382 TCONS_00092386 1 XLOC_056885 Coding TCONS_00092387 XLOC_056885 Coding Coding AP2B1 19:14964865-15017815 j TSS69541 3682 1 TCONS_00092387_1 236 9 0.930631362254245 0.00215225296618926 0.000943374363251741 0.00271062621278004 0.000651224069230916 0.000773843511837052 0.00070004530675739 0.000532057157293749 0.000591884420041098 0.00166545793293698 0.00222420021768489 0.000169988554353317 0.00066304565254022 0.000289794370898463 0.000651174621720115 5.20838923509169e-10 0.0229636424147922 0.0127049307511368 0.0150096249512563 0.00299745840780793 0.00298531410319257 0.000929978189021774 0.0121648914761948 0.00526111427052174 0.0109615574346108 0.00197149113974355 0.00200234386704979 0.00229723511382921 0.00211514048539955 0.00229152887254245 0.00136989419064447 XM_003587384.2 AP2B1 PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1 subunit (AP2B1), mRNA. 0.0 2278 99.92 0.343563280825638 NM_001030006.1 AP2B1 Homo sapiens adaptor-related protein complex 2, beta 1 subunit (AP2B1), transcript variant 1, mRNA. 0.0 2367 75.16 0.934274850624661 TCONS_00092387_1 sp|Q08DS7|AP1B1_BOVIN AP1B1_BOVIN AP-1 complex subunit beta-1; 7e-170 498 100.00 0.995762711864407 2 coding 0 0 0 0 0.0351630396752033 0.826739426690088 0.00682831438511404 0.919778047850574 CAGTGATTACCACAGAATTATATTCTGCTTGGCAGTGACCTTGGCGGGGGCATTGGAGGAAGTCCGGCAGTGGGACAGTCCTTCATCCCATCATCAGTGCCTGCAACCTTTGCTCCCTCCCCTACTCCTGCTGTGGTCAGCAGTGGTCTGAATGACCTGTTTGAACTCTCCACGGGGATAGGCATGGCACCTGGTGGATATGTGGCTCCTAAGGCTGTCTGGCTGCCTGCAGTAAAGGCTAAAGGCCTGGAGATTTCAGGAACATTTACTCACCGCCAAGGGCATATCTATATGGAAATGAACTTCACCAACAAAGCTCTACAGCACATGACAGACTTCGCAATTCAGTTTAACAAGAATAGCTTTGGTGTCATCCCTAGCACTCCTCTGGCCATCCATACACCACTGATGCCAAACCAGAGCATTGATGTCTCCCTGCCCCTCAACACCTTGGGCCCTGTCATGAAGATGGAGCCTCTGAACAACCTGCAGGTGGCTGTGAAAAACAATATTGATGTCTTCTACTTCAGCTGCCTCATCCCACTCAACGTGCTTTTTGTAGAAGATGGCAAAATGGAGCGCCAGGTCTTCCTTGCAACATGGAAGGATATTCCCAATGAAAATGAGCTTCAGTTTCAGATTAAGGAATGTCATTTAAATGCTGACACTGTTTCCAGCAAGTTGCAAAACAACAATGTTTATACTATTGCCAAGAGGAATGTGGAAGGGCAGGACATGCTGTACCAATCCCTGAAGCTCACTAACGGCATTTGGATTTTGGCCGAGCTACGTATCCAACCAGGAAACCCCAATTACACGCTGTCACTGAAGTGTAGAGCTCCCGAGGTCTCCCAGTACATCTATCAGGTCTACGACAGCATTTTGAAAAACTAATAGACTGGTCCGGTGCCCTCCAGCCACCCTGTGATCGGTGCAGGCCAAGAACTCTTGAACTGGAAGAAATTGTTATCGCCATGTAGAATCTGAACCTGAACACACCGAGGCTACCCGCCAAGGTAGTGACTAGTCTAACCTGTGCTAATGTTAGGGCACCGCCTGTTGGATAGTTTAGCTTCCTGTGACCGTCTGTAACCACTGCTTCAGTCACTTCCCACCTCGTGCCACCCGCTGCTCTCTGTCCTCACTTGTGGGCTTCTCCATGCTGTCCTTAGAGTGGCTGCAGTTTTGAGTGTAGTTTGATATTTTGTAATCGAGACCTCGTTTCAAAAGCAGAAAAAGACAACAAAAAATATTAAAGCAAGGAAAAGTGTCACTGAAACGTAAACTGCACTTTATTGTTTTATATTTTTGCACATACGAGAAATTGAGGGATAGTGTGTAACTGAGAGAAGTGTTAAGACAACCGCACAGTCCTGGAGGGAAGAGACACAGTTTCTTGCCACCTCGTGGCAGCCTTGTTCCTGATCACTTTCTTTTCTCTCCAAACTCCTTTTCCTGTGATTCCTCCTGCCCTGTATTTTCATCTCCTTTGATGCGCTGCAGCTAGGAATGGTGGTCTTCCTTGAATGGTGCTAGAGGGTGTAGGAAATGGGGCCTTGAGGCACCCAGGCTGAGAAGAAGAATTTACACAGTCCTTTCCCGAGGTCAAATCCGAGAATGACACTGACAAAAGAATTTCAGGAATCAAAATGCGCCCCCCACCCCCACCCCCATCTCCTGCTCTGGATTTAATTTAATCTCAGATCCAGTTGACATCTAAAATCTTGGTTTTAGAGTTGAAACAGACTTACTTGAAATAATAACTCATCCAACCTTGTTTTTCTAAAAAGGAAAAAGATAAAAGACAAACAGGACGTTACCGCCTGAGGACTGTTGACTGTTCGGTAGCAGAGGTGGGGGGCTGTGTCTCCGAATCCCCATCAGAGTTCTCACTGCGGGACCCTCTCGTCGACTTTCTTTCCTCGATGCCTTTCTCCTACCTTTCCGGTGCCTGCTTCCTTATGGCTCTCCTCACACTCCACGCAGATTCTGGCGCTCCATTCATTGGCATCCGGTGGCAGCAGAGTCTCTGTCCAGGGACTTGAAGGTAAACCCTGAAGCCAGAATGGAGGCCCCTCAGTGCTGGAGGCCAGCAGGGTGGATGTGGGGAGAAAGTGAGCTTCTGGTGCCACACAGTCATCCCTCGGCTCTCTCACCCGCTCGGCACTTGTGTTGCTTAGGCTCCCAGGCGGTTGAGATCACCTCAGAGGGCCAAGTCGTCCTTTTCTTCTCTCAAAAGATCAGGAAACGTGAGAACCCCTGCCCCCCTGGACACATTGGGTGTGGCTGTCAAAGAGTGCTCTGTGCCTGGAACACCAGTCTGTCCAGCAGGGTTGTCTGTTTCACCTGTGGGCACTGCTGCTGCCCAGCACTGGGGATTCCGGGTCCATGACTGAGACTGCTTCTCAGATGCCCCCGCTCTCATCAGAAGCGCCTGGGTCCAAGACCTCACATGGGACTTGGACCTGAAAGTGAATCCAGGAGGAGGAACCCTAGAAAACAGCAGAAACTACCCTGCAACCATGTTGCAAGTGAAATGACCTTGACTCATACCACTTGGAAAGCTACGGGGAGCAGATCCCCCAAAGCAGTTTCTTAAGCCTTGACTCTCTCCACGAGAAGAATTCCTGGGGTGAGGGACAGGAACCCCTCAGGCACGTGAAGAACAGGAAGTGGCACAGGATGGTGGGTGGGGGTGGGTGCCAGGTTGGGTAGAAAAGCAGGTGGGTGAAGCTCTGTGGCTGGGAGATTGCTCGTGGAGTCAGGGCGACGCAAGCAGTGAAGAAGGGCCCCGCTCCAAGCGCAGTGTTCTCGCCTCAAAGCAGACTGCAGGTCCAGGCGGCAGGGCTTGTGGCAGGGTAAGCAGACGAGACGGGGTGGTACCGAGACGTGCCCCTCCGCCCCTGAAACCCAGCTCCTCAGCCTCCCCGGCAGTCATGGGCAACAGCTGGACTTCACAGCTGATCCGGCTGGTCTGCCAGCCCTCCGCTCCTTGGAGAGGCTCCCTCCCGGTTTGCCCCTGAGCAGCTGGGGAGGGATTCTGCTTCATGAGAAGGACCCCCCTCCTGAAGAGGCAGAGCCTGTCACCTCCACCGCAGTATCCCTCGGGGCCCATTTCGAGCTTGGCCGAACGGGGGACTAGGAGGTTGCCCTGCAGTCCCCTCTCCGCCGCTGCAGCCTGTCTCTGTAACGTCCCAGCCTCTCACAAAGGGCACGGCAAGCGCACACACACCCAGGACTCTTGCTGGTCAGAGATTCCCTGAGTGTCTGCCCTCGCCCGAGCCTGTTTCCTGTGTCTGCATTGCAAACCTTGGGACTGGAGAGAAGGGGGAGGGGGGTAAGTGTTGCCCTAAGAAAACTTTTCATTCTTTTGTTGTTGGGATCTGTTCTGGGGGAGGGTGGGGGGCGGGGGAAGCTTGACTTTGTCTTCATCAATAAACTCTCATTTACACAAAATGAAGTTTGTGCTGTGTACTTTGTTCCCAGAACTGACACTCGAGGACAGAACACAGCGGGCCAGGGGAAGGATGGGGTATTAATAACCACGCTATTAGAGCTTGGCTTTTGGCTGTCCGGCCCTCCCGGGGATTTAGCCAGATGAAATGTGGAGATGGGCCTGAGGAAGCATCACACGCCTCAGAGGCTCCTGTCTCCCCGCACCCGCTGCTGTCCCCACCACCAT EMBV3_10322 CATCAAGAAATGACAGTCACTCAACAGGAAGTAAACCTGATTCTCAGAAAGACCAGGAGG Gene GeneID:537991|LRCH2:XM_002699938:97_cdna Constitutive 0 NULL GeneID:537991 X GENE LRCH2 NULL leucine-rich repeats and calponin homology (CH) domain containing 2 EMBV3_35413 GTCACATCGCCACTGGAGGTTTATCACAAGGGGTGCACCTGGAGGGCCCATTCATCAGCC Variant GeneID:521401|AMDHD2:NM_001101104:204_cdna 388^442 1 EMBV3_00602 GeneID:521401 25 GENE AMDHD2 NULL amidohydrolase domain containing 2 EMBV3_28397 TGTAGGGACATAACTAGAAGTTGGGACACCCATGTGACCAGAGAGCAATCGCAATGGAGC Gene BVV0102_231478 + 1 EMBV3_04490 GK000007.2:44565353-44591314 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23797 TATTGTTTACAGATTAGTGACACGGGCTGGAGGGAGGATCCGGTTGGCCTCTTATTTCCG Gene GeneID:519018|SKP2:NM_001102052:27_cdna UTR3_Alt 3 NULL GeneID:519018 20 GENE SKP2 MGC152600 S-phase kinase-associated protein 2 (p45) EMBV3_04120 GCCACTGGTTACGGTGCATACTTGGCTCAGTTTCAAATCGCCACTGTAACTGAAAAAGGT Variant GeneID:506203|PSMB4:NM_001034266:61_cdna 602^718 2 EMBV3_03760 GeneID:506203 3 GENE PSMB4 MGC127020 proteasome (prosome, macropain) subunit, beta type, 4 EMBV3_11557 TGCTCGAGTGGCACTTAGGAAACTCTACGGGTTCACTGAGAATCGCCAGCCCTGGGACTA Gene GeneID:532389|MRPL44:NM_001046321:127_cdna Constitutive 0 NULL GeneID:532389 2 GENE MRPL44 MGC137141 mitochondrial ribosomal protein L44 EMBV3_31424 AAACAGTAACATTTGGGTCACCAGGTTTTCCTGCTACTCCGACTTTTGGCCTTAGGAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05789 CCCTCTTGCTAAAGAGTGATTTAGTGAAAGAAGTAACTAGATCCGTGGAGGAGGCTCAGC Gene GeneID:777771|DIS3L:NM_001078156:281_cdna Constitutive 0 NULL GeneID:777771 10 GENE DIS3L KIAA1955 MGC142601 DIS3 mitotic control homolog (S. cerevisiae)-like EMBV3_22341 TCAGTGAGATCAGGTGGAAGAGACTATACCTATGTGGCTGATGGCACCGTGTGTGGAGCA Gene GeneID:536257|ADAM18:XM_002698720:159_cdna Constitutive 0 NULL GeneID:536257 27 GENE ADAM18 NULL ADAM metallopeptidase domain 18 EMBV3_39795 CTCCAGCCTCCCACATACTCTTGTGCCAGGCGCGGTGTTGCCTAGTTGAGCAACGCTACA Gene GeneID:525122|TTC34:XM_002694179:630_cdna Constitutive 0 NULL GeneID:525122 16 GENE TTC34 NULL tetratricopeptide repeat domain 34 EMBV3_30256 AGAACAGCAAGGATGAGGGCGAGAAAAAGTACTCACCTCGGGTCTTTGCCGTGCCTCGTA Gene GeneID:507285|CHN2:NM_001045963:16_cdna Constitutive 2 NULL GeneID:507285 4 GENE CHN2 MGC137510 chimerin (chimaerin) 2 EMBV3_14986 CAGGGTGGTGCTATCGCGCTTGAAATTAAGGTTAACGTAGCTGCTAAAAGAGGAATGAGA Variant GeneID:505671|RFTN2:NM_001097986:73_cdna 323^437 1 EMBV3_42184 GeneID:505671 2 GENE RFTN2 NULL raftlin family member 2 EMBV3_25545 ATTTCCAGTTGGTGTGTCGTTTCCCTAGATACCGGGCACACAGCTCACAGTCCACAGTCC Gene BVT0102_076804 - 0 NULL GK000012.2:90237260-90340328 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15991 TTACCTCAAAATGAGGCAAGGAAACGGTAGGGGAGGGACATCGGCGTCTTCTGGATGTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40556 ATCCCGCTCAGCCTGGTCTGGGACAAGATGGCACAGTTGGAGCAGCTGCATTGCTTCTGT Gene GeneID:618278|COMT:NM_001102317:127_cdna Constitutive 0 NULL GeneID:618278 17 GENE COMT MGC140449 catechol-O-methyltransferase EMBV3_42983 ATGATTGCTCTGCTTATACTGGTTGGACAGGTTTTTAAGGAGGAGAAGTACCTGAAGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05088 AGATCCACCCGCTCAAAAGCGAGAACAGGAAGTCGCCTATGACTTTCTGGCCGCAGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28704 TAAATTGCCTACACTCCAGCAGGTTTATCTACCACTGCCACCCCCAAAATAAATCCAGAC Gene BVV0102_067711 + 0 NULL GK000021.2:5654872-5793931 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21997 GGTAGCGGCGGCGACACGAGGCTCGGGGAGAGGCGCCAGTGGCTGCAGGAGGCCATGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40181 GTGAGAGAAAAACGGGTGTCTGGGACTTCTCTGGTGGTCCATTTCTTGCTTGTTAGGACC Gene GeneID:100139804|LOC100139804:XR_083809:503_cdna Constitutive 0 NULL GeneID:100139804 12 PSEUDO LOC100139804 NULL similar to cell division cycle 42 EMBV3_02516 GACATGACTTAGCAACTGAACAACAGCAGCAACAAAAAGAGGTGCCAACTCTTACAACTC Gene BVV0102_047130 - 1 EMBV3_31247 GK000028.2:26801992-26876455 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01621 GAACACTTCGTCCATCAGTCGCTAAGGCCGTGCCCTTTTAGTTAGCTCTCCAGTCTCGTA Gene GeneID:616955|NRGN:NM_001113313:41_cdna Constitutive 0 NULL GeneID:616955 29 GENE NRGN MGC137672 neurogranin (protein kinase C substrate, RC3) EMBV3_26758 TGCCTTAAAAGGAATGCTTATGGATAAAGTTGCACTTATAACACCCTTTAACAAAACCCG Gene BVT0102_209321 + 0 NULL GK000011.2:37861216-37865717 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027576 TCONS_00027579 TCONS_00027572 TCONS_00027574 TCONS_00027573 TCONS_00027578 TCONS_00027581 TCONS_00027575 TCONS_00027577 TCONS_00027580 TCONS_00027571 TCONS_00027582 1 XLOC_015282 Coding TCONS_00027571 XLOC_015282 Coding Coding CCDC88A 11:37862247-37916439 j TSS19510 8231 1 TCONS_00027571_4 1348 0.0261207629692625 20 0.848480374970013 0.00189068141528003 0.00138343525124664 0.001695749090116 1.74253701836991e-05 0.000773577717096567 0.000886462593270027 0.000784737122952354 0.00111990064195186 0.00156094758109337 7.87132274697899e-05 5.50606718865752e-05 4.57305511111577e-05 4.94861755893183e-165 0.00024572398300838 0.000363775990093476 0.000260002722293015 8.69043693726974e-05 2.41000989349128e-05 0.000484842619456455 0.00245548840913936 0.000791814266327771 5.38357512463926e-05 8.50247510435918e-05 0.000109976687969551 0.000801336475287029 0.00222760557801779 0.00144164568896469 1.92703069338026e-07 2.75935336190245e-05 2.94684603541081e-07 XM_005212640.1 CCDC88A PREDICTED: Bos taurus coiled-coil domain containing 88A (CCDC88A), 0.0 8801 100.00 0.592759081521079 XM_005264423.1 CCDC88A PREDICTED: Homo sapiens coiled-coil domain containing 88A (CCDC88A), transcript variant X6, mRNA. 0.0 5041 93.60 0.404082128538452 TCONS_00027571_4 sp|Q3V6T2|GRDN_HUMAN GRDN_HUMAN Girdin; 0.0 2505 91.12 0.999258160237389 0 coding 0 0 0 0 -0.323829497089518 0.168948161916739 0.00338120106685627 0.950624151424398 CACTGTTAGGAGTTTTCTCGGCTGTTAGCACCACAAAAATCCTTGGGCCATGAGGTGAATGAATTGACATCAAGTAGATTGTTGAAGTTGGAGATGGAAAATCAGAGTTTGACAAAAACTGTAGAAGAGCTTCGGAGTACTATGGATTCTGCTGAAGGCACCACCTCCAAAATCCTGAAAATTGAAAAAGAAAATCAAAGACTAAGTAAGAAGGTTGAAATCCTTGAAAATGAGATTATTCAAGAAAAGCAAAGTCTTCAGAATTGTCAGAATTTAAGCAAGGATCTAATGAAGGAAAAAGCTCAGCTTGAAAAAACGATTGAAACACTTCGAGAAAATTCAGAGAGACAGATTAAAATATTAGAACAGGAAAATGAACATCTGAATCAAACTGTGTCCTCCTTAAGGCAGCGCTCCCAGATAAGTGCTGAAGCAAGGGTGAAAGACATTGAAAAAGAAAACAAAATTCTCCATGAATCTATCAAAGAAACAAGTAGCAAGCTAAGCAAGACTGAATTTGAAAAAAGGCAAATCAGAAAAGAATTGGAACATTATAAAGAAAAAGGAGAAAGAGCAGAAGAACTTGAAAATGAGTTGCATCATCTTGAAAAAGAAAATGAACTGTTACAGAAAAAGATAACCAATTTAAAAATTACTTGTGAAAAAATTGAGGCCTTAGAACAAGAAAATTCAGAGCTAGAAAGAGAAAATAGGAAGTTTAAAAAAACACTGGATAGCTTTAAAAACCTCACTTTTCAGTTAGAATCCCTGGAAAAAGAGAATTCCCAGCTTGATGAGGAAAACTTAGAACTTCGAAGGAGTGTGGAATCTTTGAAGTGTGCAAGCATGAAGATGGCTCAGCTACAACTAGAGAATAAAGAACTGGAAAGTGAAAAAGAACAACTTAAGAAAGGTTTAGAGCTCATGAAAGCATCTTTCAAGAAAACAGAACGCTTAGAAGTTAGTTATCAGGGTTTAGATACAGAAAATCAAAGGCTACAGAAAGCTCTTGAAAACAGCAATAAAAAAATCCAACAATTGGAAAGTGAGCTACAGGACTTAGAGATGGAAAATCAAACATTGCAGAAAAACCTAGAAGAGTTAAAAATATCTAGCAAAAGACTAGAACAGCTGGAAAAAGAAAATAAATCATTAGAGCAAGAGACTTCTCAACTGGAAAAGGATAAAAAACAACTGGAGAAGGAAAATAAGAGACTCCGGCAACAAGCAGAAATAAAAGATACCACATTAGAAGAAAATAATGTGAAAATTGGAAATTTGGAAAAAGAAAACAAAACCCTTTTCAAAGAGATTGGTATTTATAAAGAATCCTGCATTCGTCTGAAAGAATTAGAGAAAGAAAATAAAGAGCTTGTGAAAAGAGCAACTATTGATATAAAAACTTTGGTTACATTACGAGAGGATTTGGTGAGTGAAAAATTGAAGACTCAACAAATGAACAATGATCTTGAAAAATTAACTCATGAGCTTGAGAAGATAGGGTTAAATAAAGAGCGACTCTTACATGATGAGCAAAGTACTGATGACCGATACAAACTTCTGGAATCAAAATTAGAATCCACTCTAAAGAAGTCTCTTGAAATAAAAGAAGAAAAAATTGCTGCTTTAGAAGCTCGACTAGAAGAGTCCACAAATTACAACCAGCAGTTGCGCCAAGAACTAAAAACAGTGAAAAAGAATTATGAGGCTCTCAAACAGAGACAGGATGAGGAAAGAATGGTTCAGAGCTCTCCTCCAGCTGCTGGTGAAGACAAGTGGGAGCGAGAAAGTCAAGAAACAACTAGAGAGCTTCTGAAAGTTAAAGACAGATTAATTGAAGTTGAAAGAAATAATGCTACACTGCAAGCAGAGAAGCAAGCATTGAAAACTCAACTGAAACAACTTGAAACACAGAACAATAATTTGCAGGCTCAGATTCTTGCACTTCAGAGGCAGACAGTATCATTACAGGAGCAGAATACCACTCTTCAAACACAGAACGCCAAGCTTCAGGTTGAAAATTCCACCCTTAATTCCCAAAGTACCTCACTTATGAACCAGAATGCACAACTCCTAATCCAGCAGTCTTCCTTAGAAAATGAAAATGAATCTGTAATCAAAGAGCGAGAAGATCTGAAATCTCTCTATGATTCTCTGGTCAAAGATCATGAAAAGCTGGAACTCCTACATGAACGGCAGGCTTCAGAATATGAGACTCTGATTGCTAAACATGGAACTCTAAAGTCTGCCCACAAAAATCTTGAGGTGGAACATAAAGACCTTGAAGATCGTTACAATCAGTTACTAAAACAGAAAGGACAGTTGGAAGATTTGGAAAAAACACTGAAAGTAGAACAAGAAAAAATGCTGCTTAAAAACAAAAACCATGAGACTGTAGCTGCAGAATTCAAGAAGCTTTGTGGTGAAAATGATAGGTTGAATCATACATATAATCAGCTTTTAAAAGAGACTGAAGTTTTACAAACTGACCATAAAAACTTGAAAAGTCTTCTAAATAATTCGAAACTGGAACAAACAAGATTAGAAGCGGAATTTTCAAAGTTGAAGGAACAGTACCAACAATTGGACATCACATCCACCAAGCTAAATAACCAGTGTGAGTTGCTAAGCCAACTTAAAGGAAATTTAGAAGAAGAAAATCGACATCTACTAGATCAAATTCAGACATTAATGCTACAGAACAGAACACTATTGGAGCAGAATATGGAAAGCAAGGATCTTTTCCATGTTGAACAAAGACAGTACATTGATAAGTTAAATGAATTAAGACGACAAAAGGAGAAATTAGAAGAGAAAATTATGGATCAATACAAATTTTATGACCCATCTCCTCCTAGAAGGAGAGGCAACTGGATTACTCTAAAAATGAGAAAATTGATAAAGTCTAAGAAAGACGTTAATCGGGAACGACAGAAATCACTAACTTTAACACCAACCCGCTCAGACTCCAGTGAAGGATTTCTTCAACTCCCCCATCAAGATAGTCAAGATAGTTCTTCAGTAGGTTCAAACTCTTTAGAAGATGGCCAAACTTTGGGGACCAAGAAAAGCAGCACCATGAATGACCTGGTGCAGTCCATGGTCCTAGCAGGAGGACAGTGGACAGGTAGTACTGAGAATTTGGAGGTTCCTGATGATATTTCAACGGGTAAAAGGAGAAAAGAATTGGGAGCTATGGCCTTCTCTACTACAGCCATCAACTTTTCAACTGTCAACTCTTCTACAGGCTTCAGATCCAAGCAGTTGGTTAATAATAAAGATACTACATCCTTTGAAGACGTAAGTCCACAAGGTATTAGTGATGATTCTAGTACGGGATCAAGAGTTCATGCAGGTGCAGTTAATATCCAGAGCAGGCCACCAAGCCACAGCAGTGGGGAATTTAGCCTGCTTCATGAGCACGAGGCGTGGTCCAGCAGCGGTAGCAGTCCAGTCCAGTACTTGAAAAGACAGACCAGATCAAGCCCAGCACTCCAGCACAGAACTCAAGAGAGTCGGGCACATCATAAGACCAAAACTGGTTCCCCTGGAAGTGAAGTTGTTACTCTACAACAGTTTTTGGAAGAAAGCAACAAGCTTACCTCAATGCAGCTAAAGCCCTCAAGTCAAGAGAATCTTTTAGATGAAGTAATGAAAAGTTTGTCTGTCTCTTCTGACTTTTTGGGAAAAAACAAACCAGTTAGCTGTGGTCTGGCCAGGTCAGTAAGTGGAAAAACTCCAGGAGACTTCCATGATAGACGGACAACTAAGCCTGAACAGTTTGTGAGATCTGGTCCTCAAAAGGCTGAAGATGCCTGTTTCATGAGTTCTTCAGGAAAGCCTACACGAGGCGCTCAAGGAAAGATAAAATTAATAAAAGAAACTTCTCTGTCACGACAATCAAAAGATAGTAATCCCTATGCCACTTTACCTCGTGCAAGCAGTGTTATCTCTACTGCCGAAGGAACTACTCGAAGGACAAGCATCCATGACTTTTTGACCAAGGACAGTAGACTCCCTATGTCAGTTGATTCACCACCAGCTACTGCTGATAGCAGCATCACTGCGACATCTAATGTGGACAAAGTACAAGAAAACAGAAATTCAAAAAGCAGGTCTAGGGAACAACAAAGCTCCTAATTCTATAACCCCACTACATGACATGTGGGCCAAGTGAGAGAAAAGTGTCCTTCAGTTTCTCAGTGTGAAGCCTTTATTTCTGAAGTAACAAGACACCCAACTATAGGAATCATTTTTTAAAATCTTTAAGGAGACTTAACAATCCTTCGTGACTAGAGCAGGAAAGAAATACAAACCTTCATTCCTTCCTTGAATCAAGGAGCACTACTGGAGTCAACTGCCAAAATTTTTAGAAGGTTTTTATGACTTATTATGTACATTGTACTGTTAAGATCTACTGAATAAAGCATGTTCTCTCGCTAAGGACCAAGTGTTTTAAGGGTTCAAGAAGTACTCCAAGAACAATATACTTCTTTCATCATTTGTTTATGAATTTATCCATGTTTGCTTAATGCTTCTGCTAAGTAGTAGCCTAAGTCTAGCCATTTATATTTAGTTGTGTAAACCTAAATTAAATGCTGTAGTATGCTGTGGAATGTACTATATATCAAGATACAGAGAACATTGTTTAGGCATGTCAGAGCCTTATTTGGTTAGCAGACTGCATGTGTTGGTATTCTCTTATTTTTAAGCCGATTATTTTGATGCACTGCAAAAGAAACTCAGTTTATGAAATAACTGAAAAATCCATGATAGGAGTTATAAAAAAATTTACAGTGATATTAATATTTCCATATTCCCTGCTAAGGAACACTAAGTAATTCATTCACACATGGACCCAAGGTAATTAGAATGTGTTTTTCTGAAACGTTTTTTTTAGTAAGGTGGTTTTCTAGAAAAAGACATTCCCAAGATAAAGCTATTGTGTTTGAACTCATTTCCCTTCTTTAGTGTTGGGTTATGTATGTACGTTTTTTTTTAACTTGAGAGCTGACTGTTGCTTAAGAAGTTTTCTTATGGCAAAAATAATGTAAATAATTTACTACGATCCTCATTTTGCCAGGAACTCATTTATTATTAAGGTTATCACTTATTAATACGAATTTTTGGTTTTGTCCTTTATAAGACTACATTAAAGTTGGTAACTGTTATCAGTACTTTTGAAATATTTGTATGCATTTGTTTTACATTTGAAAGAAGCACAAAACAGTAAATTTAGTTAACCCAGGGAAACATCAATTTTTTTGTAGTTCCAATTTTCTATCACAGTTTTATTTTCTTATGAAATCAAAAATTGCATTGATACATATTAATGCAAATTCATTATTTAACATAAATATATGCATAATCTTAAAGGTCTGAAATGAGAAAATACTGATTTTTTAATTTTAACAATGTACTTCTTAGGCTCTCACTACCAGCTCTAAAAATCTTTTTGGAACAATTCCATAGTGTGTGGTTTATGAACTGTGTGTTTCATCACTAACCTAGTAGCCATGAGAAATGTGTCTCCCTCTCCCCCTCCTTCCTCATGCCCTTCTCTTTTTTTCCCCTCTTTGGTAGGCCAGTAACAGTGTTGTGTTCATAGTCTACTTTCAGAAAGACCATTAATGAAAAGAAATACGGCATGTATAGTTGAAAAGAAACTGAAATGGAAGTTAGGTTTTGCCACCAAATAATGCTGTAAAGTTAAATCACTTTTAAATTCTTGGATGAAAGGTGCTATGTAAATATAATACAAAGGATTCTTACTAAGATACAAATATTGCACAACAGACATATTTAAAACCTATTCTCTAGACTGTGAAACATGTCTCCATCATGATTTCCTATATTCAAGTATCAGATTGATAATGGGCATCGTGGCAGTCTAGAGATGTCTGCATGTAAAAACTGTAAATTCATTTTTAGGTGGATAAATTGAGAGTAAATATAGAAATTATGTTTTAGCTAAATACAATAAGTGTGTAACTTAGATTTATATTAACTAGCATCTAATTTGCACAACTAGGACACATCCCAGGACATTTGCTTCAAGTTGAAATTTAATGAGTAGGAGGTAGTCCAGTGAGGGTGTGTGACACCACAGCTTGATCTCTCCAGGACACTAATATCCTAAAACAGAGACCCTGCTGACTGAAGCAACACATTATTGCTTCAGTTAGAAAATGCTTAAGGGTAGCCTGTAAAGGGCTGACTCAGAAAATGCAGCAAGACAACCAAGAGAACACTTGAGACTGCAAAAAGTAGGCATATTCTCAAATCACATCGATCACCTTTTTCATACCATTTCAAGAAAGGACTAGATAACCACATGAGTATTTTACCATTTCCAAAAGATAGCATCAGAAGCAAACTTAGTAGGAAGTCATGCTTTTCCCTTAAACTACTTCTGCCAAACAAAACCATGTAGCCAACTAGAAAGTACAATAACTGGGGCCACTTTCCTGACTGGCGCCTGACATGATTTTAATTATCTGGCTCTAATCCCCCTTGGAAACTAAAGAATTTATATACAGGGTAATAGCTTCGGCCCAGAGCTCCAATAAAGTGCTTCAGATCTGGCAATGTGGAAATGTTCAGTCCAAGTTTTTGAACTGGTGGTTACCAAAGAGTTCACGAAACAGGTTTGTATGTAGCACCTTTCATGCAAGGCATGGTAAGAGCCTATTTAAAAATCACTGTGCATATTACAGAATTGCAGCCACCTCACAAATGAAGTATTACAGCCTGTACTGTCTTAACAGTTTATGTCAGGAAGTGAAAAAGATATTGTACCAAATCTGGAATTACAATGAGGAGTAATAATGTATGCTAAATAACTTTTGTACTTTAAGTTACTTTTTTGAGAAAAGTGAAGTTTTGTGTTTTTTTTTTCCTGCTACTCTTAGTCCTGAGATGTTTTTTTCTTTAAGCCTTGAATGAATAATACAGACGGAGCCCATTTTATAATATAAACCTTGATGTACAAGTTGAGATATTTGGACAACAGTGAAAATGCCTTAAAAGGAATGCTTATGGATAAAGTTGCACTTATAACACCCTTTAACAAAACCTGATTTTAAATTGTCTTTCTTTTCTAAGGGTTCTCTCTTTCAGTGTTTGCCATTGTACTTATAACTGTTATTAAATACCAAATCAAATAATACAAGAGCTGTAACATTTCCTTTAAAATAACGCTACTGAGAAATCTGGAGTTAAATGGCAAAATGTTTATTACTTGGCTATATTAAAGCCACAGTTGATAACAAAAAATCCATTTCATAACAAAAAAGACTCCATCATTTGGCTGATCTTTTTTCAAAAACATTTTTCATTTTAGTTTTTAACTTTTTATTTCTCCTAAAAAAATTAAGTTGGTTTAACATTCACTTATCAAACTGGTATGAGATGATTTTTATAACAAGTGGTTAGCAATCATAACATATAATTTAACCAAGTATTATTCTTTCCTTTCTCTTTGCCCTAGAAAACCAATTTTCAGACATAATCTTGTTTACCTCTGTTCTAATCGCTTTGGGATGAGTATGAGAGGTTTTGGGAGAAAGAGGAGTCTATTAGTTTTGTCAATCCCAGAAGTGTCATTACAATAATAGATTATACACATCAGTCTCTTTTCATTTTCACATAGACTTTGGGAGGCATAATGTTAAGATAAGAGATGACTTGTGTCATTGGGCAGGTCAGTCTTTCTGGGCCTATTTTCACTCTAAGGTGAGAAAAGTTAGACCAGTGTCCTGAGGTCCTCAGTGTCTTTGATTCTATTCAGTAAACCTTCATTTTATATTCAAAGCAACCTAAATTTCCTCTTTCTTAGAGATATAATACCAAGTAGGCAAAAACCAGTGTAGCATCTCAGAATGTTTTCACTGATGGAAGGTATTTCTTACTAACTCATCTAACTTACTCACTCATCTATATTTTATAAAAATTCTGCCATCAGTAGACTTGTAGTCTCTAACCACATATATTGAAAAATGACAAGTTTTTACCTTTGCCTTTCAGTAATGCAAATTGGTACAAATTAAATACAATTTCTCTACCAGAGGCAATTACTCCATGTTCAGTCTTAGGAAGAAACGTTTCTCTCTCAAATATCCGATTGTACTAAAGGAAATGAGAATTTTCCTAAGTCCTCTAGGCTGTTTTGTAGCCTACTCAGACCCTCAATTAGGGTCTTATTTGAGTTTAAGAGAGGTGAAAAAGTATAT EMBV3_09184 GCAACTACTTGATTTTTAATGATGACTTCAGAGGAGCGGTCATCACTAGGTGCTTTGTCC Gene GeneID:613676|UBE2G1:NM_001082458:171_cdna UTR3_Alt 3 NULL GeneID:613676 19 GENE UBE2G1 NULL ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) EMBV3_11960 CCAGTTCTCGGAGTCTGTCCACCCCCTCTACTCCGCCCTCAAGAGGATTTCAAAGATGGA Gene GeneID:100336416|LOC100336416:XM_002697195:12_cdna Constitutive 0 NULL GeneID:100336416 23 GENE LOC100336416 NULL rCG61023-like EMBV3_34908 ACGGCTTTGTGGATCAGGATGAGTATATTGGATGAAAAGCTCACTAAAGAGGAGATCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40876 CAGGCTTAAGAGACATTAGTAGTGGTCACAGAAAACAGCTCGCCACCCTTCGTCCTCTTC Gene GeneID:100337448|LOC100337448:XM_002688376:227_cdna Constitutive 0 NULL GeneID:100337448 6 GENE LOC100337448 NULL hypothetical protein LOC100337448 EMBV3_36660 CAGAAGAGAGATTATACTGTTATTACGTGTTGTTTAGGCTGGCTTCACCGCGGGCTCCGC Gene GeneID:616277|RAGE:XM_002696774:463_cdna Constitutive 2 NULL GeneID:616277 21 GENE RAGE NULL renal tumor antigen EMBV3_16160 TGTTTGCTCTCCAAGTTCTTCCAGTGTTGAGACGCTGGTTTACACTTTACGCCAATGTGC Gene GeneID:783645|VCL:XM_002698882:9_cdna Constitutive 0 NULL GeneID:783645 28 GENE VCL MGC142547 vinculin EMBV3_18873 CCAGTCAGCTGGAAGCCAGAAATTATCAAGAGAAAGAGATTTTGATGTGTTCATTGTGGT Gene GeneID:533951|PLRG1:NM_001046362:5_cdna Constitutive 0 NULL GeneID:533951 17 GENE PLRG1 MGC137269 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) EMBV3_13015 CTGGGTGAGTAGCTCTCGGCTGTGTCTGCTCCTCGTGTGGCTCTCTGATCTGCGGTCTTT Gene GeneID:618606|IGHMBP2:NM_001082465:25_cdna Constitutive 0 NULL GeneID:618606 29 GENE IGHMBP2 MGC148976 immunoglobulin mu binding protein 2 EMBV3_34074 GTCCTATGATACTACCTTCCATGACGACCATGTGGAAGTTGGCTATGTTTGGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_27999 CATTCTATTACAGGTCTCCCGCCTGCCATGCAAAAATATCTATATCCAATCTGAGGTGAT Variant GeneID:100125938|UBFD1:NM_001105501:268_cdna 380^970 1 EMBV3_31935 GeneID:100125938 25 GENE UBFD1 MGC165765 ubiquitin family domain containing 1 EMBV3_38558 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00512 CACTTCATAGTGGATGAGCTGAACGCCAAGAAACTTCTAGAAGCTCATGAAGAACAGAAC Variant GeneID:517728|NAPB:NM_001046233:35_cdna 754^822 1 EMBV3_39184 GeneID:517728 13 GENE NAPB MGC137651 N-ethylmaleimide-sensitive factor attachment protein, beta EMBV3_15966 GTTCTGGGACCCTATCGGACGTTACAAATGAATCCCAGCCACCCAGGGACCAGGACTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09875 GACTGAAAGTTCAAGTGACACTGTGGAAATCTGCAACAGGAGGGGATGTCATGAAGGCAG Gene GeneID:513707|IPO7:XM_002693058:356_cdna Constitutive 0 NULL GeneID:513707 15 GENE IPO7 NULL importin 7 EMBV3_25904 CTTCCAAAACTGTGTTGAATAGTGGTGGTGAGAGTGGGCACCCTTGTCTTCTTCCTGAAG Gene BVV0102_256412 - 1 EMBV3_40961 GK000018.2:58755694-58791961 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250313 TCONS_00072336 TCONS_00231833 TCONS_00089492 TCONS_00251853 5 XLOC_153256 XLOC_044105 XLOC_141321 XLOC_054276 XLOC_154794 Coding TCONS_00251853 XLOC_154794 Coding Coding - X:71884406-71887703 - TSS189074 3297 2 TCONS_00251853_2 296 1.00121322414316 1 0 0 1.01591663842122e-06 0 0 0 2.71235938648249e-07 3.7144670925965e-06 1.37997882211747e-07 7.37879570555602e-06 0.000380791242574658 0.000386763754805226 0.000393569902040478 2.90090081391977e-07 2.6553356094091e-06 1.62622044508073e-05 0.000213955096623225 3.77567897204164e-05 9.09576946097551e-05 2.17498530122645e-06 2.72650843461878e-07 4.60377335117703e-07 6.40361154256619e-05 0.000474920858939748 0.000244297124727468 2.80193557607273e-06 4.71906603543248e-06 4.44279112108911e-07 7.54546825561577e-05 0.000151257333169164 0.000182263773176644 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 0.0 847 75.82 0.369426751592357 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 1371 70.16 0.969669396420989 TCONS_00251853_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 8e-131 405 74.62 0.95985401459854 1 noncoding 0 0 0 0 -0.271623017177149 0.0882678982751602 -0.0422734889707435 0.390526939682076 CTTATTGCATTATTCATTATATATTGACTCTTTTTTAATTTCTTCTAGGTCCTTGTTAAACCTTTCTTGCATCTTCTCAATCCTTGACCCCTACATATGTTGTCTACAAGAGACCCACCTCAAAACAGGGGACACATGCAGACTGAAATTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATAACAGACAAAATAGAATTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACAGAGGAGCACCACAATATGTAAGAAAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAATACAATAATAGTGGGAGACTTTAATACCCCACTCACACCTATGGATAAATCAACTAAACAGAAAATTAACAAGGATACACAAACTTTAAATGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCATGCCAAAAAATGAATTTCAGCTTTTTCTCAAGCACACACAGAACCTTCTCCAGGATAGATCACATCCTGGGCCACAAATCTAGCCTTGGTAAATTCAAAAAAATTGAAATCATTCCAAGCATCTTTTCTGACTACAATGAAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAAAAACACACTGCTGAATAACCAACAAATTACAGAAGAAATTAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAAGGAAAACACAACAACCCAAAACCTGTGGGACATGGTAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAATTGAACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCACGGTTAGTAGAAGGAAAGAAATCTTAACAATTAGGGCAGAAATAAATGCAAAAGAAACAAAGGAGACCATAGCAAAAATCAACAAAGCTAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAAAAAAATCAAATCTATAAAATTAGAAATGAAAATGGAGACATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAGCAATTATATGCCAATAAAATAGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAATTATAATCAGAAATCTTTCAGCAAACAAAAGCCCAGGTCCAGATGGCTTCACAACTGAATTCTATCAAAAAACTTAGAGGAGAGCTAACACCTATCCTACTCAAACTCTTCCAGAAAATGGCAGAGGAAGGTAAACTTCCAAACTCATTCTATGAGGCCACCATCACCCTAACACCAAAACCTGACAAAGATCCCACAAAAAAAGAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAAAATCCTTAACAAAATTCTAGCAATCAGAATCCAACAACACATTAAAAAGATCATACACCATGACCAAGTGGGCTTTATCCCAGGGATGCAAGGATTCTTCAATATCCGCAAATCAATCAATGTAATACACCACATCAACAAATTGAAAAATAAAAAACATATGATTATATCAATAGATGCAGAGAAAGCCTTTGACAAAATTCAACATCCATTTATGATAAAAACTCTCCAGAAAGCAGGAATAGAAGGAACATACCTTAACATAATAAAAGCTATATATCACAAACCCACAACAAACATTATCCTCAATGGTGAAAAAATGAAAGCATTTCGTCTAAAGTCAGGAAGAAGACAAGGGTGCCCACTTTCACCACTACTATTCAACATAGTTTTGGAAGTTTTGGCCACAGCAATCAGAGCAGAGAAAGAAATAAAAGCAATCCAAATTGGAGAAGAAGAAGTAAAACTCTCACTGTTTGCAGATGACATTATCCTCTACATAGAAAACTCTAAAGACTCCACCAGAAAATTACTAGAACTAATCAATGAATATAGTAAAGTTGCAGGATATAAAATCAACACACAGAAATCCCTTGCATTCCTATACACTAATAATGAGTAAATAGAGAAATTAAAGAAACAATACCATTCACTATTGCAATGAAAAGAATAAAATACTTAAGAATATATCTACTTAAAGAAACTAAAGACCTATATATATATATATAAAACTGTAAAACACTGGTGAAAGAAATCAAAGAGGACACTAATAGATGAAGAAATATGCCATGTTCATGGATTGTAAGAATCAATATAGTGAAAATGAGTATACTACCCAAAGCAATCTATAGATTCAATGCAATCCCTATCAAGCTACCAACGGTATTCTTCACAGAGCTAGAACAACTAATTTCACAATTTGTATGGAAATACAAAAAACCTCGAATAGCCAAAGCAATCTTGAGAAAGAAGAATGGAACTGGAGGAATCAACCTGCCTGACTTTAGGCTCTAATACAAAGCCACAGTCATCAAGACAGTATGGTACTGGCACAAAGACAGAAATATAGATCAATGGAGCAAAATAGAAAGCCCAGAGATAAATCTGTGCACCTATGGACACCTTATCTTTGACAAAGGAGGCAAGAATATACAATGGATTAAAGACAATCTCTTTAACAAGTGGTGTTGGGAAAATTGGTCAACCACTTGTAAAAGAATGGAACTAGAACACTTTCTAACACCATACAAAAAATTAAACTCAAAATGGATTAAAGATCTAAACGTAAGACCAGAAACTATAAAACTCCTAGAGGAGAACATAGGCAAAACACTCTCCGACATACATCACAGCAGGATCCTCTATGACCCACCACCCAGAATTTTGGAAATAAAAGCAAAAATAAACAAATGGGACCTAATTAAACTTAAAAGCTCCTGCACAACAAAGGAAATTTTAAACAAGGTGAAAAGACAGCCTTCAGAATGGGAGAAAATAATAGCAAGTGAAGCAACTGACAAACAACTAATCTCAAAAATATACAAGCAACTCCTGCAGCTCAATTCCAGAAAAATAAATGATCCAATCAAAAAATGGGCCAAAGAGCTAAATAGACATTTCTGCAAAGAAGACATACAGAGGGCTAACAAACACATGAAAAGATGTTCAACATGGCTCATTATCAGAGAAATG TCONS_00244704 TCONS_00244705 TCONS_00244706 TCONS_00244708 TCONS_00244709 TCONS_00244710 TCONS_00244711 TCONS_00244712 . 3' 77706 TCONS_00244704 TCONS_00244705 TCONS_00244706 TCONS_00244708 TCONS_00244709 TCONS_00244710 TCONS_00244711 TCONS_00244712 . 3' 81002 EMBV3_30095 AGGACACTGTGGCTTGGGTGATTGGGGTTGGTGGAAAGTGTGTTTTGGTGACTTAGGAGA Gene BVV0101_028872 + 0 NULL GK000002.2:128008112-128078917 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42266 AACCCGCGCGATGAAGTGCGTTTTTGTTACTGTAGGGACCACCAGCTTTGACGACCTCAT Gene BVT0102_101040 + 0 NULL GK000030.2:65067492-65187599 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244642 TCONS_00244631 TCONS_00244633 TCONS_00244634 TCONS_00244638 TCONS_00244626 TCONS_00244629 TCONS_00244627 TCONS_00244641 TCONS_00244628 TCONS_00244630 TCONS_00244632 TCONS_00244635 TCONS_00244637 TCONS_00244636 TCONS_00244625 TCONS_00244639 TCONS_00244624 TCONS_00244640 1 XLOC_150510 Coding TCONS_00244624 XLOC_150510 Coding Coding ALG13 X:65143602-65149878 j TSS183817 1494 1 TCONS_00244624_1 165 4 0.762549800796813 0.000674228472720456 1.38027211755739e-08 0.000298417638090857 3.46963267380161e-27 0.000312103645182427 1.5911858465892e-62 8.74267877807897e-28 0 2.42071890024247e-07 5.75832028589304e-22 0.00317162845314118 0.00171483416379984 0 1.64144564992993e-34 4.4747173589957e-05 0.0151832118154242 0.00635643620594315 0.0252071876436095 3.3624858770214e-28 1.10116677921535e-101 0.000505843814813843 0.00685583203612111 0.00967454674013928 0.00901668545249824 3.10177066366304e-48 6.33934740541151e-31 1.24990464417741e-14 0.000901555662791895 0.000637853194491986 1.74301100384674e-05 XM_003584307.2 ALG13 PREDICTED: Bos taurus asparagine-linked glycosylation 13 homolog (S. cerevisiae) (ALG13), mRNA. 0.0 746 100.00 0.275769745649264 NM_018466.4 ALG13 Homo sapiens ALG13, UDP-N-acetylglucosaminyltransferase subunit (ALG13), transcript variant 2, mRNA. 0.0 1191 82.25 0.789825970548862 TCONS_00244624_1 sp|Q9NP73|ALG13_HUMAN ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog; 3e-77 251 83.56 0.866666666666667 1 noncoding 0 0 0 0 -0.0486100555607887 0.78557954699698 0.0345782595344986 0.5593934804274 GCGGCCGCCTGCGTGGCCTCCGATACGTCACATCCGGCCCTTGCGATTCGGGGTTGCGGAACCCGCGCGATGAAGTGCGTTTTTGTTACTGTAGGGACCACCAGCTTTGACGACCTCATTGCGTGTGTATCGGCGCACGACAGTCTGCAAATAATCCAGAGCCTTGGGTACAACCGACTTGTCCTACAAATAGGTAGAGGAAAGGTGGTACCTGAACCATTCAGTACTGAGTCATTCACTCTGGATGTTTACAGGTATAAGGATTCACTGAAGGAAGACCTTCAGAAAGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGTTTGGAGACTTTGGAGAAAAGAAAGCCACTTATAGTGGTTATAAATGAACGGTTGATGAACAATCATCAACTGGAATTGGCAAAGCAGCTACACAAAGACGGGCATCTCTTCTACTGTACCTGCAGCATGCTTCCTGGGCTGTTACAGTCAATGGACTTATCAACACTGAACTGTTTTCCTCCTGGCCAGCCAGAAAAATTTTCTGCATTTTTGGATAAAGTTGTTGGATTACAAAAATAAACACTAAACTCTCAACACTTTAAAAACACCCCTCAAATTCAACCCGTGGAATGTGGTTAAATCAAGTTTAATATAGAGTATATGTTTATAGAATAATATAAATTAATAAGTCTCCTACATCTATAGAATGTATAGAAAATTTTATTTGTGAATGTTAGCATTTGGGTCCAAATTCTAATTGCAGTTTCACAAGTTTATTAGACTTTTTCCTAATCTTCGTATTTTAGTAAAAGAAATATATAGTGAACATTCACACAGTTTATCCTTGAATCCCAAATGGGCTTGGAATCATGAAAAAAATAATTAAATATGAAAGCTTTGACAAAAACCTCATATGTAGTTACGTTATGTTCCTTAGAGTAAACAATGAAACAGTAACAGACTTGTAAAAAAACATTTGAGTCAGAATCTTTAGCTTCATACTCCAACCAAATTAAAACAAAACAAAAATGATGGGTTGTGTTCTGTGAAATAAATTATTTATATAAGCTCAGTAATTACCTTAAAAAGATTAACTTTCGAGTCAGTTGATCTACTATACTTCAAGAAACTGTTATCCTGAAGAATAGAGTGGAGTGGATGTATTCATTTTGTTCCTATAAAGTATAAATAGAAAGTGACAATCAAATGTCAAGAAATAATTTCTAGGGACTGCCTCATGTGAATTAAAAGTCTGGGAAGAAAAAGGTTAGAGAAATAAAAAGAGGAAATATAAAAATCGCAAGGAATTTTGTAACGGTATAATCCCACCCTTATTAATAAACACAGTTCACAATGATAAAAGTGACAAAAATAATCTTACCCAATGCCAAAGCTTTACTGGTTTGAGAAGAGTAAATCAAAAAGCATTTGTGCCGATAGGAATTGCTGTTTTTTTTTAAGGACCACCCTCTTACAGTGGTATTGAAACATTTATTGTAGCATCAT EMBV3_41036 TTTGCAAGAAAACCTGGGGCTCTGGGACCAGGGGTCTGATAGAAATGCCTGAGGCAAGGA Gene BVV0102_184979 + 1 EMBV3_10860 GK000007.2:41780370-41790196 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216694 TCONS_00216696 TCONS_00216698 TCONS_00216695 TCONS_00216697 1 XLOC_131297 Coding TCONS_00216695 XLOC_131297 Coding Coding LOC509006 7:41787545-41806517 j TSS161550 4649 1 TCONS_00216695_6 388 0.166702516670252 9 0.755416161509673 8.19542365338405e-07 3.0722339417857e-10 2.70782672275534e-05 6.02511372184612e-22 1.71140725768159e-41 1.17418834754981e-10 1.68185953003338e-09 1.81826162432839e-10 0.000122801657690037 3.27235272224362e-12 2.1536896724454e-09 7.5244473131449e-10 1.0763326395117e-09 1.45537049668971e-10 7.96505686412145e-11 0.00163969100494807 0.000252690775162606 0.000162644622478541 5.73832277650418e-07 1.6481149435535e-05 9.19141273911035e-11 1.69110325215332e-09 0.000429375719323556 1.13076973207955e-07 2.27741391289542e-10 3.88105140986924e-12 7.68172107517946e-11 1.52025824503281e-06 1.48249747395977e-06 2.75647408820049e-09 XR_235239.1 LOC509006 PREDICTED: Bos taurus class I histocompatibility antigen, Gogo-C*0101/C*0102 alpha chain-like (LOC509006), transcript variant 0.0 6381 100.00 0.760808776080878 TCONS_00216695_6 sp|P13746|1A11_HUMAN 1A11_HUMAN HLA class I histocompatibility antigen, A-11 alpha chain; 3e-81 257 42.90 0.762886597938144 2 coding 0 0 1 1 0.0755008483553342 0.473785507578673 0.00291117824744021 0.968386187355681 CCAGCCGGAAGTCTGAACCTGAGCCAGGATGTGGTCGCACCCTCCGCGGCCCAGAGGGAGCTGAGCGCTCACCCGCCAGGGACCCGGGAGCGGACGCGGCCGGCGTTAGCACAACTGAAGGCGCCCCCCCCCCCCCCGGGGACCGGCGCCCTCGGGCGGTGCGTGAGGCTGGCGACCATGTGGCTTCGTAGTTCCGGGAGTGCGCAGCACCCGCGGCCGCCGCCACCACCATCACTGCTGCGGCTGCTGCTACTGCTGTCAGGACTGGTGCAAAAGGGAGCGGCAGAGAGTCCCTGGGGGTTGCCCTCGGTGGCCGATGGCCCAGCTTCCATGGCAAAGGTGGTGATGGCAGAACTGGCAAACCTGAAGTTGGAAAACAAGTCATGGCCTAGAGGGACGCACTCCCTCCGCTACCACTACCTGGACCTGTCAGAGCCGGACCCGAGCCTCCCTAAGTTTCAGGCTGTAGGCTACGTGGATGATCAGCCTTTTATCCGGTATGACAGTCGTGTGGACAAAGCTGAGCCCCAGGCTCCATGGATTATGCCCATGAATGCCAAGTACTGGGAGAAGGAGACCAAGAAGCAGAGGAAATGGGCAGAGCTTCATCAGGTGGAGACATGGAGAATGATGGGCTACCACAACCACAGCAGCGGCATGCACAGCACTCACCGCATGTTTGGCTGTGAGATCCAGGAAGATGGCCACTCCAACAGCTTCTGGCAGTTTGGCTATGATGGGCAAGACCACGTGTCACTGGACATGGAAACTCTGAGTTGGGTGTCAGCTAACCCCGTGGCTCTGTTGACCAAGCGTAGAATGGAGACAGAGCACTGCTATGCTGAGTACAACAAAGCCTACCTGGAAGGCCCCTGCCTCGCCTCCCTGCGCAGATACCTGGAGCTGGGAGGCCAGAGATTCACCCGGAGAGAACCACCCACAGTATGGGTGACAAAGCACTCAGCCCAGGACGGGGGTACCACCCTCAGGTGCTGGGCCCTGGGCTTCTATCCACAAGACATCACACTGAGCTGGTGGCTGGGTGAGAAGAAGTTGAATTCAAAGCTTGAGTATGTGGAGGCACGCCCCAGTGGAGATGGCACCTATCAGACGTGGATGGCCGTGTGGGTGCCGGCTGGAGATGAGACCCAATACACATGCCACGTGCAGCACTGCAGCCTGAATCACACACTCACTGTGTCCTGGGAAATGCCCTCTCATCCAGGACTTACGGCCATGGTTATCTCTCTCATCCTGATCTTGCTGGTGTTTGGTGGTGGTGTGAGTTTGACCAAGTGCCTTCAAGCCAGGAATAAGGAACCTTACGAGCAACCCCCAGGTTAAGAGGACCCCCATAATTCTCAAAGCCCAGCAAGATCAGGAGCTGCTCAACTCATCTCCTGACAGAAGTCACTGTCACAGATCAAGGAAGTGTTTTGTGGGGTGTTAGGGGGCCTGAAGGCCTCCTGCCGTCTAATTATTTCTGTCTTGGGGGGTGGGAAGGGGGGGCAGTAGTAATCCCTCAGGTCCTCTTACACTTGACATTTTGCAGAGTGATTTCATGTTAATTGTAAATACCACTTCAGCTTCTCAGGCACTCTATGAGTTTGACAATGTTACTCTTATTCCCACTTGCCCAACATGAAAACCAAGGGTCTGGGCAGTCAGGGAAAAACCCGAAAAATATCCAAGAGTTATAGCGGCAGCATCATGTGTGAAGCTGCTAGCATCAGAAAGAAATGGCTGAATGCCTGCCTCTTTCATAGGTGTGTTCTGTATATATGTATGATCTCCTTTTGTATAGATTAGAGTGTTGGGTGTGTGAGGGTATAGGGGAGGCAGTAAGGGTAGGTGTGTGAAACTGAGGAGGTGTGTTAAGGTGAGGATGTGTGGGTGTGTATGTTTGAGGGTGAGAGGATATATGGGGTGCATGTGAGGGTGAGTGGTATGTGTGGTGTGTGGTATTCTTTTGTATTTGAGGAGAAGCTCAGAAGACAGGTACCTGGAGACCTGTTAGTTAGTCCCAGGCAACTGAAGGTTGGGAAACAATTCAGTTTCCCTATGTCCTATCCTTTTGAACGGTTGAATTTTTACAATAGGCACAGGTTACTGTTACAGTAAGGAAAGACCCCTTTTCTCTATGTCATGTGAAAATGCCTATGAAGGATATGTCTGGAGAAGGCCCAGCCTCACCTTTGCATATTCAGTGGAGCAGAAACCCCTTGTCCCCTCAATGAACAAGAATCCAATCTTAGGGCCATTTGATGTGCCAGCAGCTGGGACTCCAGAGCCAAGGCAGAGAGATAGCGTGCTCCATTGTCATAAAGGACACAAGGTCAGACCCCTTCCAGAGCACCCTCTGCCTCCCCTTCAGCTGACTCCAAAGTGTGACAGAGCCTCCTGTGGGGAGTTTGAAACCTCTGTGTCTATAGCCCTGGGAGGCCCAAAGGCCAAGGATGTGAATGATTGTAATACTAGAAAAAGACTCAACCTGCCCTGGTGGCCTGTGGGACCTAAGCAGTGAGCTTGTAATGACTGACTTGTACTGAAGACATGTCTTATATGTCTGTCTTTCTCACTGATGTTGTCATGCCCCATATATGCTGTGCAAACCACTTACTAAGCAGAGTTCTAAGCACTTTATTACATGTTAGTTGCTCAGTCGTGTCCAGCTCTGTGAGACCCCATGGACTGTAGCTCACCAGGCTCTTCTGTCCCCGGAGTTCTCCAGGCAAGAATACTGGAGTGGATAGCCATTCCTTTCTCCAGGGGATCTTCCTGACCCAGGGATCGAACCTGGGTCTTCTGCATTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCCTTTATTTTATACTTTATTGTATTCTAAGCTGTTTAATCTTCCAAGCATGACTGTGAGGGGGAATTAATACTCCTGTGGTACAGATGAGGAAACTGAGGCCCAGGGTCCCACAGCTGATTCATGCCAGAGCTAGGATGTGAGGACTGCTGCAGCCTGGCCACCTCACCACTGCACCAAAGCCTCAACAATAACTGAGCTGTTCTGTAAATGGGCAAAAATATTGATTTGGGGGATTATTAGATGTCACCCCAGACATCTCTGGTTGCTGCTGCTAAGTCGCTTCAGTCATGTCTGACTCTGTGCGATCCCGTAGACGGCAACCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCTATGCATGAAAGTGGAAAGTGAAAGTGAAGTCGCTCAGTGTCCGACTCTTAGCGACCCCATGGACTGCAGCTCACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCATTATATAATATTCAGCATTCACATCTTGGTATCTTTCTAAAGCCTAAAGAATTCTAAATTCTAAACTATATCCGACTCTAAGGGTTTTGGGTAAGGGATTGTGGACCTGTATTAATAAGGTTTTGTGGTAATAAACATGTTTTATTTTTTCAGTTCTCTGGCTGTATGGTGAGATGAGTTATAACAAAGGTCAGGTCTGGTCCCCAGCAATGGGAGGCACAAGTGCCCAGGTGGACCCTCAATGCTCCCTCAGCCCTGGGTACACTTAGGGCCTCCTGAGAAAAAGTGGAAGTTTCTTCTCTGGGGAAGGAGTAGAGGCAGAACGTTTTTGGGAAGAAGCAGATAGAAGGAGGCTTCTGATTAGTCTTTCTCTCTTTAAATTGGTATAGCCTGGTCACCCTTCTGTACCCCAAGGTTATGGGGGTTCAGGTTCCTCTATAGACCCTCCAGAGCCACCTCCCAGTTTTGATCTCACCCAACCAAGTGTAGCCCTTAGACTGACAATCTGCATGGCTTCTTTGATGCAAGGAGGTGGTATATTCAGGGAGTCTTAGATATAGGGTCTGGCTTCTGTAATTATGCACTGGGCAGAATAGGCTGGAAGTTCATGTCCAGTTCTGGGCTTCCCTGTGTCTAGGACCCTGAATACTTCTGGGGCTGTGGAATTAAAGGGACAGAGAGGCCATAAACTAGAACAGTGCCATAAGAGCCCCTGTAGGACAGCAGCAGGGCCCCAAGCACCTGCCCCTTAAAGGTATGGTCTTTCCTTCTTCCATTAGCTTCATTGGCTAATTGGCTTAGAAACTGCCAGAGGGCAAGGGATGTGCAGTCTACATCTGTCCTGGATATCCATCCACAAACCCTGGTTTTTACACCTCACTGCCTTATCCTGCTGGTTCTACTCATTCTGTCCACCCAGCCTCTGATCTCCTCATCAGAACATAACATTTGCAAGAAAACCTGGGGCTCTGGGACCAGGGGTCTGATAGAAATGCCTGAGGCAAGGAGACAGCTGTTACACTGCCTACCCTGGCCTGAGGGGCCTTCCTCCCCTTTCCTGAGTCCCACTAACCCTTCCCTGGTGGAGTAGCCCCCACCCCAAACTTGACACCCCAGGCAGAACCTACCAGCCTTTTTGCTGCCAGTGGCACCACTGTCCTGATGTTCAAGAAGTGTGTGTTCCATAAACAGATTATGAAGTCTTTGGTAACTGGATCGCTTTTATTTTGTTTTAATCATACCTCCCTTATAGACTAGTTCAGTGTTG EMBV3_03969 TTCCTCTTGTCACAACCACTTTTGCCTGTTTTGCAGTGTCCTCCTAGAGAGAGTCTGTGC Gene BVT0102_190639 + 0 NULL GK000004.2:61125666-61190528 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184168 TCONS_00184171 TCONS_00184164 TCONS_00184165 TCONS_00184169 TCONS_00184172 TCONS_00184173 TCONS_00184170 TCONS_00184161 TCONS_00184167 TCONS_00184162 TCONS_00184175 TCONS_00184163 TCONS_00184166 TCONS_00184174 1 XLOC_111290 Coding TCONS_00184166 XLOC_111290 Coding Coding ANLN 4:61163534-61242509 j TSS137206 5700 1 TCONS_00184166_8 1160 0.0724561403508772 24 0.928128244738775 0.00271604308187998 6.36144917159225e-35 5.66954719439429e-13 3.39674141179802e-18 7.59265214345775e-16 6.98072461816757e-17 0.000407196703324895 0.000835216728452502 1.83525213812252e-06 2.55723216215514e-11 0.0012543226130322 7.78876055013137e-09 7.25175472090348e-06 9.4023211524222e-05 6.58653797210932e-08 0.00707513790659361 0.00144608853057789 9.23545556539092e-06 1.46663259761787e-07 1.06484360832217e-07 6.73436482169149e-21 0.00192620756036636 0.00303339305108522 0.00506064210944772 1.08633068617228e-06 0.00128125568441307 8.02312138682054e-19 0.00131746565048648 0.00040760153734106 0.00105122182997308 XM_596461.6 ANLN PREDICTED: Bos taurus anillin, actin binding protein (ANLN), 0.0 8314 99.59 0.816491228070175 NM_018685.3 ANLN Homo sapiens anillin, actin binding protein (ANLN), transcript 0.0 5277 85.22 0.807894736842105 TCONS_00184166_8 sp|Q9NQW6|ANLN_HUMAN ANLN_HUMAN Actin-binding protein anillin; 0.0 1903 86.61 0.968103448275862 2 coding 0 0 0 0 -0.073717305205835 0.642222867260792 -0.0247335846514683 0.607830210738631 ATGGTCTTCCTCCCAAGTCTGGTGGTTGACTTCCTCCCAAGTCAGCTGGGCCATGTGTCTAGCAGGCTTAACCGGGGCCTCTTCACAGGAAGACAGTGTTCCAAGAGAAAACTGCTTGAGCGAACCCGTGCCAGACGAGAGAATCTTCAGAGGAAAATGGCTGAGCGGCCCATCCCAGCAGCAAGGTCTCTGACTCATGCCAAGCGGATCAGGGAGCCACTTTCGGAAGCAAGTAACCAGCAGCCCCTATCTGATGGCGAAGAGAAATCTTGCACAAAACCATCACCATCCAAAAAACGCTGTTCTGACAACACTGAAGTAGAAGTTTCTGACGTGGAAAATGAAAAGCCAGTTGAGTCAACGTCTGCAAAACTTTGTTCTCCAAGGCCTGTGTCCCCTCAGGCTCAGCCACAGATGTCTCAGGCACCCGCTGGTGTCAGTGACTCCTTGGCTGCCCCAGCCTCAGCACCACTGCTGGGTGTGAGGAGTGGGCCGAACTCAAGACTGGGAGCAGCTGCAGCCTCTTCAGTCAGAACACGAATGCAAAAGCTGGCTGAGCAGCGGCGTTGTTGGGATAGTGACGATGTGACAGATGATATACCTGAAAGCTCACCCATCTCAGCAATGCCATCAGAGGAAAAGGCTGCCTCCCCTCCCAAACCATCCCTTTCAGATGCCTCAGCAACTCCAGTTGGGAGAAGGGGCCGACTGGCCAACCTTGCTGCAACTATTTGTTCCTGGGAAGATGATGTAAAAACCTCATCTGCAAAGCAAAACAGTGTGCAAGAACAGCCTGGTACCACTTGTTTATCCAAATTTTCCTCTGCAAGTGGAGCATCTGCTAGGATCAATAGCAGCAGTGTTAAGCAGGAAGCTACATGCTGTTCCCAAAGGGATGGCGATGCCTCTTTGAATAAAGCCTCATCCTCAAGTGCTGTGGGTGCATCTTTGATTAACGTTGCGATTTCTAGCCCTGGGAAAGCTACTTCTTCCCCAGTGAAATCTTCTACAACATCCATCACCAGTGCTAAAAATTGTAAGGTCCAAAATCCTGAACTACTTCAAAAAACCTCTGTTAGTCCTCTGAAAACAGAAGTATCAAAACCAGTTGAGAAGTCAGCTGTATCCTGTACAGTTCGGCCCAAGGAAGAATTAAACAGAGAAATTTGTCTGCGGTCTCAACCTAAGGACAAATCTGCAACACCAGGAGGATCAGGAATTAAGCCTTTTCTGGAACGCTTTGGAGAGCGTTGTCAAGAACATAGCAAAGAAAGTCCAGCTCGTAGTACACCCCATAGGACTCCCATTATCACGCCAAATACAAAGGCCATACAAGAAAGATTATTCAGGCAAAACGCGTCTTCATCTACTACTCACCTAGCACAGCAACTCAAGCAGGAACGTCAAAAAGAACTAGCATGTCTTCGTAGCCGATTTGACAAGGGCAGTTTATGGAGTGCAGAAAAAGGCGAAAACTCAAAAAGCAAACAACTAGAAACCAAACAGGAAATTCACTGTCAGAGCACTCCCCTCAAAAAACAAGTTGATCCAAGTACCCCATCACTTACAGTAACAGAAAAGGTGACAGAAAATCAGACACCAGCAAACCCTTCTAGTAGAGAAACTTCAGATTTTATTGAATGTGAAATGACTAAGTCTAGCCCTTTGAAAATAACACTGTTTTTAGAAGAGGACAAATCCTTAAAAGTGACATCAGAACCAAAGGTTGAACAGCAGACTGAAGTGGTACGTGAAATTGAGATGAGTGTGGATGATGATGATGATATCAATAGTTCAAAAGTAATTAATGACATCTTCAGTGATGTCCTAGAGGAAGGTGGACTAGATGTGGAAAAGAACCAAGAGGAGTTGGATCAAGCAGATGCAGAAAGCAGCGAAGAACAGGAAGATGCACTAAATATTTCCTCGATGTCTTTGCTTACTCCATTAGCACAGACAGTTGGTGTGGTAAGTCCAGAGAGTTTAGTTTCTTCACCTAGATGGGAAGTGAAAGACACCAGCATCAGTGATGAAAGTCCAAAGCCAGGAAAATTCCAAAGAACCCGTGTCCCTCGAGCTGAGTCTGGTGATAGCATTGGTTCTGAAGATCATGATCTTCCTTATAGCATCGATGCATATAGATCTCAAAGAGTCAAAGAAACGGACCGTCCTTCGATAAAGCAAGTGATTGTTCGGAAGGAAGATGTTACTTCAAAATTGGAAGAAAAAAAGAATGGTTTTCCTTGTCAGGTTAACATCAAACAGAAGATGCAGGAACTCAATAATGAAATAAATTTGCAGCAGACAGTGATCTATCAGGCTAGCCAGGCTCTTAACTGTTGTGTTGATGAAGAACATGGAAAAGGGTCACTGGAAGAAGCTGAGGCAGAAAGACTTCTTCTAATAGCAACTGAGAAGAGAACACTTTTGATTGATGAGCTGAATAAATTGAAGAATGAAGGGCCTCAGAGGAAGAATAAGGCTGGTCCCATATCCCAAAGTGAATTTGTCCCTTCCAGAGGATCAATTACTTTGTCAGAAATCCGCTTGCCTCTAAAAGCAGATTTTGTCTGCAGTACAGCTCAGAAACCAGATGCAGCAAATTACTATTTCTTAATTATACTAAAAGCAGGAGCTGAAAATATGGTAGCCACACCATTAGCAAGTACTTCAACTTCTCTTAACGGTGATGCTCTAACATTCACTACTACATTTACTCTGCAAGATGTGTCCAATGACTTTGAAATAAATATTGAAGTTTACAGCTTGGTACAAAGGAAAGATCCCTCAGGCCCTGATAAGAAGAAAAAAGCATACAAGTCAAAGGCTATTACTCCTAAGCGACTTCTCACATCGGTAACCACTAAAAGCACCCTTCATTCTTCAGTTATGGCCAGTCTTAATGCTGTGCGGACCAGCAACTTTGCCCTTGTTGGATCTTACACTCTGTCATTATCTTCAGTAGGAAACACAAAATTTGCTCTGGACAGGGTGCCCTTTTTATCTCCTTTGGAAGGTCATATTTATTTAAAAATAAAGTGTCAGGTGAATTCAAGTGTGGAAGAAAGAGGTTTTCTAACCATATTTGAAGATGTTAGTGGTTTTGGTGCCTGGCATCGAAGATGGTGTGTTCTTTCTGGAAACTGTATCTCTTATTGGACTTATCCAGATGATGAGAAACGAAAGAATCCCATAGGAAGATTAAATTTGGCCAATTGTACCAGTCGGCAGATAGAACCAGTCAACAGAGAATTTTGTGCAAGACGCAACACTTTAGAATTAATTACTGTTCGACCACAAAGAGAAGATGACCGAGAGACGCTGGTCAGCCAATGCAGGGACACACTCTGTGTAACCAAGAACTGGCTATCTGCAGATACCAAGGAAGAACGGGATCTCTGGATGCAAAAACTCAATCAAGTTCTCGTTGATATTCGCCTCTGGCAGCCTGATGCTTGCTATAAACCTATTGGAAAGCCTTAAACTGTGGGACATTTCCATGTCATATAGAGGTTTTCTGACGTATGTCATAAATGTATCTTAAGAGCATCAGATTTGCTGGTTGCATTTTATGCTTTAAATACAAAAGGATATGTGCCAATATTCATTCACTACATATTATGCAGTATTTATATTTTTTGTATGTAAAACTTCACCGGATTTCAGTTCTGTTATTCATAAATGATTAGTAGAAAAAAATTTATTATAGTTGATTTTGCTGAATTTTAATTTAAAAGCCTCATTTTCCTAGATATCTGATTATTCTATTATTCATGATAAAACATTTGTTTTAAAGTAAGGAATTTTGAATTGTCTCCTTAGAGCTGTGGGTCTCAAAGTAGAAAGATCTTCCATGATTGGAGACAGAAACCTCCGACTTGACCATTCTTTCTCTAGCCTGAGTACTTTTTTCTGAAGATTGTGGTCATTTACTGATCATGATATATCTTGTTTCTAGAGCACTGAAAAAAATTCTAAGGGACTTTGCAGAAACATTTTTAGTAATGGAGGTAAGAACCTTTTAAAAATAGCAAATGCATATTAGTTTGAAGCTTATGGCTGCCATCAAATAAGACATGTGGACATGGGGGATATTGTGTGAGATTTGGGGGTTAAATGTTTTATTTAGAAGACTTAATCACATGGTTTATATTTACTCACTTACTATAGATGCTGTGTGATGCACATTTCCATGGAATACAGGCTTTTAAAAATAACTATTTTTGCTATATAGCTTACAGGCTCCTCAAATATACCTGGCAAATTACTTCTTTCTGCTCCTGTAATAAGAATAAATGTAAATTTGAAGACTCTTTATGTAAGAAAAGTAACCCTCACCAAGCTGCTATGGACTAATACTTTGCTTGCCTAAATCCGTGTCTTTTTTTTTTTCACATCCATATATGACGGTGTCTAGAAACCCATTATGAAAATCACTTGAAAAACTGTTAAGTCATATATTACCTTTAAAAGCCTAATGCCTTTTTTTTTCAATTATAAAAGATTATAAATGTAAACCACAGGCTCACCTTTAAGTACACTTTCAATTTCTTTGAATTGTTAGTTATTGATGGCCTCACTTATAAACACTAAATTCTGTCACCTCCTGTCATTTTATTTTGTATTCATTCAAATGTGTTTTTTCTTGTGTATATTATAAAACTATATTTTATTATCTCCTACGTAAATAAATACTTGCAAATGACTTAAGGAATTAGCTGTTTAAGAAATACTATTAAATTGTGCTGTACAACTGCTCTGCATTCTAGGCTGTGGACTCCCTCAGGGAGTTGTACTGACTTCGTGAGGATATTTCACCATCTTTTTACCTCTAGCCCAGAGCTTAGCTCATTGTGTGTTCTTAGAGTCCCTGTTGAGTGAGGAGGTGGGTGAAGGATCCATTTCTGAGTCAGTTTGATGGTACTTGGACGCACATCTGAGGAGACAGAGGATGATTCCCAAGTGCTTAGCAGAGACTGAGTAGATAAGTAACATCACCAGCCAAAATAGGATATAGATTTGGTGGGATTGGTGACAGGTTCCCTTTTATTTATTTGTAGGTTTGTGTTATTTTTGAATAAGTGTTATACGTCATTATTCAAAAATTCAAAAGACAGAGAAGTTAAGTGAAAAGTATGTCTTTTCCTCTTGTCACAACCACTTTTGCCTGTTTTGCAGTGTCCTCCTAGAGAGAGTCTGTGCATATTATTGATTCATCATCATATTTCTTTTCTTTTGTTCATTAAAAATATTCCATCCCAACCTAGAGATTGTCATACTGAATGAAGTGAGTCAGACAGAGACAGAGAAATATGGCAAGACATCCCTTTTATGTGGAATCTACAAAGAAATGATACAAATGAACTTACTTACAAAACAGAAACGGACTCACAGACCTTGAGAACGAATTTATGGTTGCTGGGGTACAGGATGAGAGGAAGGGATAGTCAGGAAGTTTGGAATGGACATGAACACACTGCTATATTTAAAATGGATAACCAACAAGAACCTTCTGTATAGCACAGGGAACTCTGCTCAATGTTATGTGGCAGCCTGTATAGAAGGGAAGTTTGGGAGGGAATGGATACTTGTGTATGTACGGCTGAGTTCCTTCGCTGTTCACCTGAAACTATCACAACATTGTTAATCAGCTATACCCCATTACAAAATAAAAAGTTAAAAAATATTCCATCTGTACTG EMBV3_12049 TTGACCCCGGCTTGACTGTGACCGTTTCAGAACGACATGGAACCCAGCAAAGCCGTTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38012 GCACGTCAACCCCTTTCTCCCCTACATCAGGGGCAGCCACAATGTACACAAGGTATAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33336 GTTTTTGTAACCATATGACTGAAAAGGAAGATGTCTATGCTCAGGCCAGTCAATACACTC Gene GeneID:539930|CALB1:NM_001076195:73_cdna Constitutive 2 NULL GeneID:539930 14 GENE CALB1 MGC138959 calbindin 1, 28kDa EMBV3_32255 CTCCTGCACAAGCACCTACGTCAATGAGCTGGTAGATTCCATTACATCAGGGTTCAATGT Gene GeneID:785107|LOC785107:XM_002699188:1_cdna Constitutive 0 NULL GeneID:785107 29 GENE LOC785107 NULL similar to olfactory receptor Olr1242 EMBV3_29912 TCTTGAGGTAAAGTAGTTGCCATTGCCTTGAGATAAGAAAAAGCTGTGGGGTAGGGCAAG Gene BVV0101_017835 + 0 NULL GK000008.2:93030644-93237901 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18352 TGTCTGATATTTTTTGTAAAGGCCCTTAAAGGTCCTCAGAAAGCAAGGATCATGAAGCAG Gene GeneID:100137763|LOC100137763:XM_002686687:103_cdna Constitutive 1 NULL GeneID:100137763 4 GENE LOC100137763 NULL hypothetical protein LOC100137763 EMBV3_00176 CCATGGCTGGGTTAGGATTCAACGGTTGATAAAGCCTTTCTTGAAACTGCCCTTTTTGTG Gene BVV0102_291503 - 1 EMBV3_29789 GK000008.2:112336419-112418135 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39213 TGATCAAGGGAACGACGAGGACAAAATAAAGGCGACCCAGAGGCTTCTAGACCAGCTGCC Gene GeneID:100337132|LOC100337132:XM_002688038:17_cdna Constitutive 0 NULL GeneID:100337132 6 GENE LOC100337132 NULL T-cell activation Rho GTPase-activating protein-like EMBV3_31008 GCCTAGAACCTAGAACTGTTGTCACTCCTTTAATAAGGGTCCCCTGTCTGCTTGGGTGAC Gene GeneID:533884|ZNF512:NM_001083472:171_cdna Constitutive 1 NULL GeneID:533884 11 GENE ZNF512 MGC142837 zinc finger protein 512 EMBV3_37196 CCTTTCACAATTTCTGACCGGGGCATACTGGACCGCCATCAACTCTATCTGACCACTTCG Gene GeneID:100139191|LOC100139191:XM_002695201:898_cdna Constitutive 0 NULL GeneID:100139191 18 GENE LOC100139191 NULL similar to hCG1796489 EMBV3_30030 GCTCACCATGACAACTTTGAGTATCAGTGCCAGAAATTCCCTCCCTAAGGTGGCTTATGC Gene GeneID:282235|GABRA1:NM_174540:5_cdna UTR3_Alt 2 NULL GeneID:282235 7 GENE GABRA1 MGC137550 gamma-aminobutyric acid (GABA) A receptor, alpha 1 EMBV3_17926 ATTTTGGCTGGGTAAATAGATTCCGGAGTGCCCTCACGTGTACTTTTGTGGCAACACCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07164 TGAAGATGTGAATAAACAGCTGGACAAAATGTGGCATTCAAGATGTACTTGGGCATCACT Variant GeneID:538669|TRAPPC3:NM_001076120:239_cdna 248^347 1 EMBV3_29686 GeneID:538669 3 GENE TRAPPC3 MGC142405 trafficking protein particle complex 3 EMBV3_32019 GATCGAGTCCCTCCGGAACTCACACTCCAGATAAGCCAAAATGGTTTTGCTTACAAGATG Variant GeneID:513985|VPS37A:NM_001046161:49_cdna 396^912 5 EMBV3_04311 GeneID:513985 27 GENE VPS37A MGC137205 vacuolar protein sorting 37 homolog A (S. cerevisiae) EMBV3_35767 GGAGACCCATTCTGTGGGGTCTTGCCTACAAGGGTGAACATGGTGTTAAGGAAGTTTTGG Gene GeneID:509481|HAO2:NM_001035071:41_cdna UTR3_Alt 2 NULL GeneID:509481 3 GENE HAO2 HAOX2 MGC128394 hydroxyacid oxidase 2 (long chain) EMBV3_14071 AGTCCCGCCTAGGGAAGCCAACTGCCCGTCATCCTTTACGATAAACTGCTTCGTTTCTCT Gene GeneID:100335253|LOC100335253:XM_002707710:157_cdna Constitutive 0 NULL GeneID:100335253 10 GENE LOC100335253 NULL GTP-binding protein Rheb-like EMBV3_27418 GAGAGTAGTACGTTTCCTCTAACTCGCGGAGCAGAAAGAAATTGTGCGGCATAAGCAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02898 AAGAGGGTCCCAGAGAGCTTCCTTCTCCTTGCTGTCCAGTTCAAACCACTACTACAAAGG Gene GeneID:522159|PLD2:NM_001075827:123_cdna Constitutive 0 NULL GeneID:522159 19 GENE PLD2 NULL phospholipase D2 EMBV3_27597 CCCTATCATTTTACGCTTCCTCCTCCCTCAGACTTGACACACTGCCACCCACACACCTCT Gene BVT0102_018546 + 0 NULL GK000018.2:56430762-56443745 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087096 1 XLOC_052353 Coding TCONS_00087096 XLOC_052353 Coding Coding NOSIP 18:56441034-56455792 = TSS64713 4587 1 TCONS_00087096_2 302 0.34379768912143 9 0.689774344378939 0.000358767977170375 9.55486260362908e-05 0.000816703223450752 0.000595610789099969 0.000324463877792581 0.000330714333542746 0.000181490384042482 0.00027683087471632 0.00028097236811398 2.63968373724013e-05 9.47833245716033e-07 7.63902902101352e-06 0.000487654529893424 4.36313925388534e-05 0.000159408482230834 0.000206293563777866 1.17072635432322e-05 5.38821973261382e-05 0.000904195645306882 0.00161792355879188 6.50243685174059e-05 2.37539341639874e-05 1.64315585891122e-05 4.19273663561874e-05 0.00120057480406132 0.000271372157421328 0.000196594164588192 1.71534999285317e-05 6.9257042426832e-06 1.62720844300979e-05 NM_001075502.1 NOSIP Bos taurus nitric oxide synthase interacting protein (NOSIP), mRNA. 0.0 3281 99.84 0.398081534772182 NM_015953.4 NOSIP Homo sapiens nitric oxide synthase interacting protein (NOSIP), 0.0 1287 88.71 0.216699367778504 TCONS_00087096_2 sp|Q3SWY5|NOSIP_BOVIN NOSIP_BOVIN Nitric oxide synthase-interacting protein; 0.0 623 100.00 0.996688741721854 2 coding 0 0 0 0 -0.581274719742017 0.0349460571654459 -0.0270198926239458 0.696158499642628 TTAGGGGCAGAACTACTTCCGGTCTCTTCCCCGGGCGGAAGCGTCGGAGCGGAGAGGGAAAACAGCGCTCCTTTCCGGTGTAGGGGTACTGTTGAAGTAGCCACCGAGGAAAGAGGGTCGTCTGTGAGCTTCCCCATCAGGTCAGCTCGGGGACCATAAAGGTCCAGTCCTCTCTGTGTGGGCTCCCTCTGGTCACCACCGCCTTGCAGCTACCCCTTCCTCCCCGCCGGGATGACGCGGCACGGCAAGAACTGCACAGCAGGGGCCGTCTACACCTACCATGAGAAAAAGAAGGACACAGCGGCCTCAGGCTATGGCACCCAGAACATTCGACTGAGCCGGGATGCCGTCAAGGACTTCGACTGCTGCTGCCTCTCGCTGCAGCCCTGCCACGACCCTGTCGTCACCCCAGATGGCTACCTGTATGAGCGGGAAGCAATCCTCGAGTACATTTTGCACCAGAAGAAGGAAATTGCCCGGCAGATGAAGGCCTACGAGAAGCAGCGGGGCGCCCGGCGAGAGGAGCAGAAGGAGCTGCAGCGGGCAGCGGCGCAGGACCACGTGCGGGGCTTCCTGGAGAAGGAGGCAGCCATCGTGAGCCGGCCCCTCAACCCCTTCACCCCCAAGGCCGCCTCGGCAGGGAACGGCCCAGACGATGCCCAACCCGGGTCCAGTGCGGGCCCTGCAGGCAAGGACAAGGACAAAGCGCTGCCCAGCTTCTGGATCCCGTCGCTGACCCCCGAGGCGAAGGCCACGAAGCTGGAGAAGCCGTCGCGCATCGTGACCTGCCCCATGTCCGGGAAGCCGCTGCGCATGTCCGACTTGACGCCGGTGCGCTTCACGCCGCTGGACAGCTCCGTGGACCGCGTGGGGCTCATCACGCGCAGCGAGCGCTACGTGTGCGCCGTGACCCGCGACAGCCTGAGCAACGCCACGCCGTGCGCCGTGCTGCGGCCCTCTGGGGCTGTGGTCACCCTGGAGTGCGTGGAGAAGCTGATTCGCAAGGACATGGTGGACCCGGTGACCGGGGAGAAGCTCACGGACCGTGACATCATCGTGCTGCAGCGGGGCGGCACCGGCTTCGCGGGCTCCGGAGTGAAGCTGCAGGCGGAGAAGTCCCGGCCGGTGATGCAGGCCTGAGCGCGGGAAACCAAATAAAAGGGGCTTGGACGCTACTGGCCATGTGGCGCCTTCATTCACCGCACCGGAGCCCAGGAGCCCGGGAATGGCGTGCGCTCCGGAATGACTGTGCTTTGAAAGCCTGGTCTGGGAATGTTTGGTGTGGTCTCACGTTAAGAGTGAAGTCTGAATGGAATGCAAACGCACAGCTGTAAATGGGTTGAGTGGCCCCAAGTCGGAATGTGAGCTGCGACCACCGGAGGGCGCCACGTTAACGGGCTAGATGGAAATCCCCGCGCATTCCTTTTGAGTTAAACCAAATTTGAAGCCTGGGAGCTTTAGCGGCACGTGTCTCCCATTGCAAAGTGTAATAAGACACCCAAAGGAAATGAAGTGCTGTGTCTGTGAGAGAGAGAGAAAGTTAGGCACCCGGTCTAGAGAAGGCTGTGAGGAACACCCCCTCCCCCGCCGGCTGAAGGCTGGAGGGTGGAGAGGAAGAGGAAACCGCAGTGCAAAAGCCCAGAGGCAGCAATGTGCTCGGCGGGTGTGAAGAGTGGGAGGAGGTCAGAGCAACCCGGTCTGGTGGACCTGCCTGGAGCTCGGACTCGGCTGGGAGGGCAGGGGGGCCCTTTCAAGCTACGTTTTTAATAATCGTTGAGTCAGAAAAACAGACCCTGTGCAGTGTGGAGAACCAGAGCTAAAAGCTGCAAAATACGGCAAAGAGTGTAAAAATAAAGACTGGAAGTCCTGCCTCTCAGAGCGATCCCCGGGTTCTGTCCTGCCAGGTCTTCATCAGCCAGGTCTTTCTCAGAGGAGTTTTTTCCACCAAAGAGATTTCCATGCACATACTTCTCCGTTAATTGAACAGTCTCTGCCCTTTCATTTTGGAAAATGGTCTTGTCATCCAAAGCCCAGACGAGATTCATAAGTGTCCTTGAATGCTAGGCAAGCTCATGTCTGGTGTAGGACCAGGGGGTGCATCTGGGGTGCTGCAGGGAAGAGTTATCAGTAGGAGGGTGGGTCATCCTTGCTTGCACCCTGGGGAGCCCCCAAAACCCAGCATTTCCTCCCTCAGACATTTCTAGAACCTTCATGCCCTGCTCTTGGGATCCCAGTCTCCAGAAACTAGCTGAGGTGCTGCTGACACTCAGGGCGCCCTTGCCCTCTGGGCCTGTCGGTCTACAGTGTGTGCAAGTCCTGGCCACAATCTTGAGGGAAGAATGCTTGTACCCATTTTGCAGAATAGCTCACTGAGGCTGAGAAAGCTGGCCCAAAGTCACACTGCTCAAGGCCATAGCTGAACCCAGGTTCCCCCAGAGATCAGCCACCTCTGGATCCCCTTCTTCAGTCCTGCCCTTCCCCCCTATCATTTTACGCTTCCTCCTCCCTCAGACTTGACACACTGCCACCCACACACCTCTCCACTGTGGCAAGCTCTCACCCCATCCCTTTATACCCAGAGTGATGAGATTAGCCCTCCCTGCTAAGCTAAGTCACTTCAGTCATGTCCGACTCTGTGCAACCCCATGGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAACTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCATGGGATCTTCCAGGCTAAACACGCCCAATCTCTGTCCTCCCTAAGAGCCTTTAACTACCCGGAGTCTTCTCTTGGAACCACATCCACCCAAGGACTCCAATCCTGTTTATGTGTGGTACAGGCCATTCACCACCCCAAATAAAGACTTAAAGGTGCAACTTGGAAATCCCAGATTTCCACAAGAAGCCTAAATCTCACTCCTTAATTCACAGGCCCTTTGAGATACCCTTTCCTGGGAGGGGTAGGGTGCAAGTCAAGGTCTTAGCTCTAAGAAATAGGTTTTCTTTAAGATTTCAAATGTAACAAGGAGAGGAAGCAAGAGTCAGACCACAGCAGAAGCTAAGGGTGGGACGGGAAGTGGAGACAAATTTTGTCTTTTCTCAGCAGAGGTTCTCTAGGTGGTGGTCTACAGTTTAGAGCAAGAAATGGGCATGGGGTGGGGGATGCTGCGCTTATCTTGACCTTCAGCATCAGCTAGCCCACAGACAGCATTTTAGGACAATTATAATTACTGGTTGAGATTTTTTAATGGGGAGACTTTTCTAGAAAGGGAGAACTATATATACAGGGAGCAAATTGTTGGTGTCTAGGGGAGCAGGAGGGATTGACTGCAAGGCTGGCATAATAAGAATTTGGGGCAGCATGATGGATCTGTTCAGTATCTTAATTGTGGTGGTCGGATGACTGATTTATCAAAACTCATAGACCTATACAGAAAAACAACTGGACTTTATCTGAATCAAAATTTTAAAATGCAAAAGGGGATATCGTGCAAGTAGATTTTCATATCCCTTTAAAAATGAGCATAGCAATTCCACTCTTACACATAGACCCAAGAAAATAGAAAACAATGTTCATGCAGAAACTTCAACATGAATGATTCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCATGTCCAACTCTGTGCGACCCCATTGACGGAAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAATTGAAAGTGAAGTCGTTCAGTCGTGTCCGACTCTGTGCGACCCCATGGACTGTAGCCCACCAGGCTCCTCCATCCACGGGATTTTCCAGGCAAGATAACTGGAGTGGGGTGCCATCGCCTTCTCCGATGAATGATTCTAGCAGCACTAATCTTCTAATAGCCCCAGAGTAGAAACAACCCAAATGTCCATTAGCTGATGAATGGGTAAACAAAATGGGCTGAATCCATGCAATGAAATATTACTCAGACATAAGGAATGATGTTCTGATCCATACTACAAAGTGGATAAACCTTGAAAGCACTATACAAAGTAAAAAGTCAGACGAAAGGTCACACTCTGTTACATAAAATGTCCAGAATAGGCAAATCCATAGAGACAGAAAATAAATTAGTGGTTACCAGGGGCTGAAGGGAGGAGGGAAGTTGGACGTTTCTATGAAGACCTACAAGACTTTCTAGAACTAACACCCCCCCCAAAGATGCCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAGATACCTCGACTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGGCAAAGGCTAATAGAGTTTTGCCAAGAGAACGCACTGGTCATACCAAACACCCTCTTCCAACAACACAAGAGAACGCTCTACACATGGACATCACCAGATGGTCAACACCGAAATCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAAGC EMBV3_09744 TGATTCTACTCTCTTTGTTCACCAGCACTGCAGACGCCCTGCTCCATGGTCTGATGGTGT Gene GeneID:521914|LOC521914:XM_002688795:193_cdna Constitutive 0 NULL GeneID:521914 7 GENE LOC521914 NULL similar to hCG1791432 EMBV3_09833 TCACACCTGGGGGAATTGCCAACATTGATATTTGAACTATTAGCTGAGAAAGATTTCAAC Gene BVV0102_087930 + 0 NULL GK000012.2:11227521-11277767 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18259 AGTGCAATGCAAAAGGGACACCGTGTATATGCAGCGTGCGTTTGGTTGTTTTTCTTTTTT Gene GeneID:506127|SKI:XM_002694180:633_cdna Constitutive 2 NULL GeneID:506127 16 GENE SKI NULL v-ski sarcoma viral oncogene homolog (avian) EMBV3_03579 ACTCTATACGGAAAATAGGCGCTTCCCACTGGTGGACTTCTGTGTGACTGTCTCCTTCAC Gene GeneID:514665|SYPL2:NM_001075676:104_cdna UTR3_Alt 2 NULL GeneID:514665 3 GENE SYPL2 MGC143415 synaptophysin-like 2 EMBV3_03337 CGGCAGCCAGCTCGGTTCTCAGGATGTCCTGAGAGGGATGTTTTCACAGAGAAGCCCAAG Variant GeneID:100138522|LOC100138522:XM_002687046:147_cdna 142^472 1 EMBV3_34013 GeneID:100138522 4 GENE LOC100138522 NULL hypothetical protein LOC100138522 EMBV3_41622 TTTCTGCCTTTGGCTGCAACACCATCAAGAAGCCCACGGTGTTCACACGAGTCTCAGCCT Gene GeneID:281752|CELA3B:NM_001166518:21_cdna Constitutive 1 NULL GeneID:281752 2 GENE CELA3B ELA3B chymotrypsin-like elastase family, member 3B EMBV3_17355 TGTGGCAGAAGACCAAGCTTTAAGGGATTGTGGACTTGCAGACCCTGACGCGTTATATTG Gene GeneID:510095|C22H3ORF63:XM_002697004:395_cdna Constitutive 0 NULL GeneID:510095 22 GENE C22H3ORF63 NULL chromosome 3 open reading frame 63 ortholog EMBV3_01636 CCAGTCACAGTGGCTATGTGCAGATCGACTGGAAGAGAGTGGAAAAAGATGTAAACAAAG Gene GeneID:518258|FUNDC1:NM_001104982:23_cdna Constitutive 0 NULL GeneID:518258 X GENE FUNDC1 NULL FUN14 domain containing 1 EMBV3_15321 GCTAGAGTTGGATCCCGAAAAAGTCAATATCAAGGGAGGAGGTGTTTCTCATGGACATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37988 CTCCCGCCGCCGGTCTCCTAGAAAAAATACTCATAGAAAACCCCCTAATGGAGAACTGAC Gene GeneID:100299346|LOC100299346:XM_002693975:209_cdna Constitutive 0 NULL GeneID:100299346 16 GENE LOC100299346 NULL hypothetical protein LOC100299346 EMBV3_20882 AGGACTTGTAAAGGGGAAGATGGTGTATGTCCAGGGTCCTCTAGGGACAGTGAGGACACA Gene GeneID:100140069|WDR86:XM_002686978:802_cdna Constitutive 0 NULL GeneID:100140069 4 GENE WDR86 NULL WD repeat domain 86 EMBV3_12324 CATGTCTCCAAGAGAATTTGCCGAAATGACCGCCATGGAGATGGCCAGCCAGGAACTGAA Gene GeneID:521897|LOC521897:XM_002700436:14_cdna Constitutive 0 NULL GeneID:521897 X GENE LOC521897 NULL similar to TFIIS central domain-containing protein 1 EMBV3_17349 GGAGGCTCTGAAGGTCCATGCATTCCACTCCATTTCCTAGGAAGTCTGCAAAGCACAGCT Gene BVT0102_032470 - 1 EMBV3_20952 GK000015.2:67741049-67768373 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18543 TGCAACAAAGCCTATTACAAGTCATCACATCTGAAGTCCCACCAGCGCACCCACACGGGT Gene GeneID:785436|KLF14:XM_002686951:102_cdna Constitutive 0 NULL GeneID:785436 4 GENE KLF14 NULL Kruppel-like factor 14 EMBV3_37201 AATATTCTCCTGCCTCAGGGAGATCAGAGGAAAATGAGGAAGAGGAGGAAGGCAGCCGCT Gene GeneID:100140569|LOC100140569:XM_002707883:15_cdna Constitutive 0 NULL GeneID:100140569 29 GENE LOC100140569 NULL similar to Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) EMBV3_25678 CGCTGCAAAGACCTCAAAACCTTCCTGCATGAGTCCTTCTCCAGTGTGACCACCAGTTGT Gene GeneID:783267|RNASE7:XM_002690656:207_cdna Constitutive 0 NULL GeneID:783267 10 GENE RNASE7 NULL ribonuclease, RNase A family, 7 EMBV3_39451 ATGGACCTCATTCAAGGTATACAAGAATTGAAAGTAGGAGATATTTTGGGCTTGTAAATC Gene GeneID:511455|NEK4:NM_001101944:139_cdna Constitutive 1 NULL GeneID:511455 22 GENE NEK4 MGC159441 NIMA (never in mitosis gene a)-related kinase 4 EMBV3_05942 CCCACTCGAATTCCGTTTGGAGGCTTCTTTGAGCTCGCGGAGTATACATGAGCAAAGCAC Gene GeneID:100301175|LOC100301175:XM_002688078:112_cdna Constitutive 0 NULL GeneID:100301175 6 GENE LOC100301175 NULL similar to small nuclear ribonucleoprotein polypeptide G EMBV3_07211 GTGGCTGATATTAATTGGTATGGATTGATGTGCTGTGATGATATATGTTCTGTATGCTGT Gene BVT0101_011490 + 1 EMBV3_29154 GK000030.2:15540836-15811929 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206254 TCONS_00057018 TCONS_00058128 TCONS_00206255 TCONS_00009371 4 XLOC_124865 XLOC_034820 XLOC_035925 XLOC_004927 Coding TCONS_00058128 XLOC_035925 Coding Coding - 14:82094015-82099878 - TSS43805 5863 6 TCONS_00058128_1 65 0.844618795838308 1 0 0 1.42822748366776e-07 0 2.26982300237977e-07 1.64909315741234e-06 5.01643347238605e-07 3.72998741831484e-07 2.45759859409671e-06 3.47966094467518e-06 0.000107045530380264 4.7061861663878e-05 3.38377227786038e-05 1.62262430322906e-05 9.22541666462247e-05 3.73875052193381e-05 0.0023618740805083 0.00205303858559483 0.00606208114821067 5.28149909105646e-07 2.2487391664253e-06 7.68131334997797e-08 0.00162059026821142 0.00170753933579914 0.00208593180334666 1.18172881090719e-06 1.1807456501134e-06 8.03475725376602e-07 0.000480588386363405 0.000383517105637161 0.000551319458979418 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 1058 85.03 0.154187276138496 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 1e-09 71.6 70.59 0.0283131502643698 0 coding 1 1 1 1 -0.595416926795943 0.174418025970049 -0.0383345061947562 0.593236167095668 CAGCCCCGGTGGATCCAGGGAATTCGAAGCGGGGACGGCGTCGGCGAGGATCAGGAAACAATTGCTTAATTAAACGTTAATTAAGGATATAAAGAGTAATAGAATGAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTAAGAGAAAGAACGACATGGTGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAGTAGTTTTTATACCTTAAGTTATGCATAGAGGATAATGGGGGAAGGGGTAGAGTCATGCAGCAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGTTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTTTTTCTCTAAAGGTGATTATTCTCAAGTCAGGCGCCAGCCTCCAAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAACTATATTAATCAATACACTGCCAGGGACACAGCAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTTTAACTGCTCAAAGGAATCTGTATTTAGACAGTTTAGAACATCTCATGCCTCTCACAGTTTGGAGGCTCTGAGCAATCACATGTGGCCGGAAAAAACCTATTCAGGCAGGCTAGAGGACTTCCAAGGGAGTTTGTAGGTTGAAACACTGTCACACCCAGGAATTATTAACTGGAGCTATAAGCTAACTCTTTTTTCAGAGAGGTAGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAAAGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATTGCTCGAGAATTTCCAGGGAGACTCCTGAGGCTTGATCCCGCCTTTGCGTATGCCAAGCCTCCTTCCTCATGACCTTTGCCAGAGGCGGAGCTCGCTCCCCGCATCTCCCCCTTTTTTATTTCTTAAAACAGCCAGAGGCAGCTCAGTCGCGAGCTTTTGAATGCTCTGCCGAAGAATCCTGACAATACAAGGAAGAATGATTATGAGAAGCAAAATTAGAACTAAAGATATTAGACAGAATGCTTTTTCCAGAAGTAAAGTTAGAGAAGGTGTGAAATAAGTCATTAGCTGCTCCAGCGGTGGTAAAATCCAGTTGACAGTGTTCCAGGGTCTGTATTTGATTATGAAATTTCCCTAAGTCCAGGCCAATGTCAGAGCTGTTGCAAACACCTGAGATATGTTTTTTGATTTTTTCCCATTCATAATCTGTCTCGTTTACCTTTAAAGATGTCACGCATATCCACCGGTAATCAGCGTGGCAAGACAGAGCCATTTTCACTTTTAAAGCCTGTAACTCAGTCCCAATATGCATTATTGCCTCTTTTAAGGTGTCTACTCTCATCTCTAATTTCTTATCTATAGCTTCCTGTGTTGCTAGAGTTAAAGAAACACTTTTAGACGTGGTATCAACATATTGGGCAGTATGCACTTGTTGAGTCAATGATATTGCTGCCGCAGTAACAGAACTAATTGCTGCTATTAAAGCTGATATTCCTAAAATAAGTAAAGCCCACAAATCGTCGCGATCACATTAAATCTTGTAGTTGTTGTAACACAGCAAGACTATAGTTATATCAATAAGTGGTTACATCGTAAGATATGGTGGACATTGTAACACTACCAAAGAGCAAACATTATATTGAGGGTTTAAACAAGATGAGAGCATGCATTGTTCACAAGTCACTACATTGGGTCCACCAGTGAAAGTCACATGTACATTAAGTTTTCCAGAATCATTGGTAAAGAGAAAAACATAAGGAAAGGGTAGACAAGCCAAAACAGAATAAAGTAGAATTATTTTCTGGTTGGAGTTCGCACTGCAGCAGCCCCGTCAGTCTTGCCGGGATCTCGATGTTTATCTTGCCTCCCCTTCCGGCAGGCTCCTCTTTTGTGATCGAAGCAATGGGGAACTGGATGTCTGGGGGTCTGCAACATGGCGAATCAACCTGTCTTGGATCTAAATTGGAGAATCTGCATCCTGTGGAAAAATACAAGCACATCCTCGACCGCTAGTTAATAAGGGGTCAGGACCCTTCCATTGTCCTGAGAGAAGGTCCTTCCATTTGACTAACGGTTTTGCATTTAATTGCTCCAGGCACCAATGACAAAGCATTGCAGTAGTTCCAGCCAGATCAGTATTTAGAATATTTGTTACGAAAAGAGCAAATATTTATTACGAAAAGAGCATGTTGCAAGATTTGATGGGGACAGCTATACTTAAACTCCCCTTCTTTTAGTTTTTGAATTTGGATTTTTAATGTTTGATGTGCTCTTTCCACAATGGCCTGTCCCTGGGGATTATAAGGGATGTCTGTATTATGTTTAATTTGAAACTTTATACAAAATTCCTGAAAAGACTTAGAAGTATAAGCAGGAGCATTGTCAGTTTTCAAAGCTTTTGGTAGGCCCAAATATGAAAAACAAGTAAAGAGATGTTGTATTACATCTTTAATTGCTTCCCCTGTATGAGCAGTTGCAATAATAACATGAGAAAAGGTGTCTACAGTTAAAGAACAAAGGACAGTTTTCCAAATGAAGAGACATGAGTTACATCCATTTGCCAGAGTACGTTAGTTTTGAGACCGCGAGTATTAACTCCCATAGGTAGACTATTATAAACAGTGGGGCAATATAAGCAAGAACACACAATCTCTCGAGCAGCCTCTCTGGGAATTTGGAATTGATATCTTAAGGCAGTAGCATATTGACGATAAAGTAAGTGAGAGGCTCTGGCCTCCTCAATCACAGTAGCCACTGTATTTCAGGTTAACAAGTCAGCCAAATCATTAAAGGCATTTTAAGGGCCGGGCAATCCAGAATGAGCCCGAATGTGTCCAATGAAAAATATTTTATTTCTTTTCCAAATTTGTTGCTGTAATTTAGTTAACAAATGAAATATGGTAGTTTTATTTTCAGGCAAAACCGCAGTTTCAATGTGTGGAAACAACCTGACAATATACTGAGAATCAGAATAAAGGTTAAATTCCTCATCTGCAAACATAGCAAAAGCCTCTATGACTGCTGTTATTTCAGCTCTTTGAGATGAAGTTTCCCGTGTTTCTAAAACCTTTTGGTGATTTTTAGTAACTATGGAGGCTTTACCATTTGCTGACCCATCAGTAAAAACTATTTGAGCATTTAGAATAGGAGATTGTTTACATCTGACAGGAAAAATAACTGGATGTCTCGATATAAAATTCAGCAAAACATGTGAAGGTAAATGATGCAAAATTTTGACCAAAATGGTTTCCTATAGCAATCTGCCAATTTTTATCAAACATTAGAAGAGCAACAAGTTGTTCCTTAATGTATGGAATTACAATTTCTGATGGCTCTTTACCAAATAATCCAATGTTCCGCTTTTTTCCTTTAATATCAAAGTAGCTATCAATCCTGGATAAGAAGCCACTACTTTTTTAGTTTGAGCGGGAAGATGGACCCACTCTAGGGGGGCCATTTTGCCAATTTTTTGTCTGGTTACCCCAGTTACACCTATGGGGGTTTTATGGCAAAGGAATTATCAAGCAGTTGTCAATTTAATTTTTAAAATTTACATTTTAACAATATAAATTTAGAGATATGTTAATTTAGGTCTAATGTTTAGTTTAGGTCTCCGTATAAATTTAAATAATAAATGTATAACCTCCTTATCTCATTTTGATATACAGATATACCTAAATGCAAAATGTATTTATATATGGCAACAAGTATAGACTTATTGACATAATATACTTGAATTAATCTTTATAATTAATGTTAATTAATATATATTACAGCAATACAACACGTAGACAGCTAATACCAACCAACACAAACCAATGTACTGTAATAATACATGTCACACATATATAATTATACAGTATACAGGACATATATCATCACAGCACATCAATCTATACCAATTAATATCAGCCACACACATTATATTACTGCAATATACATTTAATTATACAGTATATATATAATATGCATATATAGTATACATACTAATTTATATACAAATTAATTAAGTATAGATCTATAAATAGAATTAGGTATACCTTTATTATATTTTATTTATACCCATATCTAATTAGGCAAACTGTAATTAGGCAAATATATTTATATTATGTATTTATAACAATATATAAAGTATTGTTAATTGTACCTCCTGTTGATAACTAAGAAATTGAGAAAACCCTTCTCTGAGTATCTCCTATTTGAGACAGCACGTCCCTCCCCCACAGGGTAAAGTGGAGCATAGGAACTACATACGGTTGGAAAGTTCCACAGGTATCCTCAAACTGCCAATCTAACATTTTTGAACTTTTAACTACTGTGGGGGCTTGAGGGCAAATGAAACAAAATTTGACCCCTGAAATCTATCAGGGCAACTTGCCAATTATCACTATTTCATAAAAGACTTGCAGTTGATCCTTATTGAGTGAAATTATTATATTTGCTACTTATTTTCTAAAAAGTTCCACACTTCTTTTTTCCTCCTTTTATAATTAATTGTGCCACCAAGCTGGATAAAGATAAAACTATTTTTCTTGGGATCACTGGTAGATGGAACCAATGGGCCTTTTTGTCACAATCACCCTGTAGGTGTATGTTTTATGGCAAGAATAATTTAATCTTATCTTTTGGTAGTATTAATCCTAATTAACTGATCATTTAAAGTCTCATACACTTCAACAAGAGCTAACTCTGTCTCATTAGTTAACTTTCTCTTAGAACTGGAATTAGGATCAATTTTTAAGCAATCAAATAAAGGCTTTAAATCTGCAGTAGTCAGTTTTAAATGAGGGCGTATCCAATTAATGTCTCCTAATAATTTTTGGAAATCATTTAAAGTTAGTAAACAATCTCTCCGCAGCTTCAAAGGGGCATCATCAGTTTTTAAAACTTTTGGCAGACCTAAATATGAGAAGCAAGTAAAGAGGTGTTGCACAACATGTTTATAAGCTTCTCCAGTTATCGTTTTGTAAACGATTTTGTAAAATCTGGTCTATAGCCTTTTAGATGACAAGCAACCATCTAATCTTTGCTTGAATACTTCCAGCAACGGGGAACTCACTATTCTTCAAGGTTTTAAACTCTCCCTCACCTTTTTCTCTACAGCATTCCCACCCCGCATACCAGTTTCTCTAATCTCAACTCATTTTCAGTAATATGTGTTGGCCAGGAGCTGGGTCAGTCTTTCCCAGCAATGTTAAGAGACGTCTGTTCCTGTGTCTAATAGCCCTGACATTTTATTTTCTTGAATTAAAAGATCTTTTAAAGGCCTTGGAGCTGTAATTTCCTGCACCCAAAAGGCTGGATCACTAGATCTAAACGCTCTGTGGCTCTTAGCTTGAGAAGTCAAGTTTTTTCCTGCCTGATAAGGTAAAAGAAAAACTGTGTTATTCTTTGACCTTTATTAATTTGCACAGTTTTGGTAAGCGGCGAGATCAAAACTATAATTTCTCCAATATAATCAGAATCTACCACACCATATACCACCGAAATTTCTTGAAAAGAAAGCGAGCTACACCCTAGCACAAGTCCTACAATGCCCTCAGGCAGGGGGCCAGCCACTCCCATTGGAATCGGAGCAACCGGCATATCAGGGGTTAATATTGTTGCTAAATCCCTTTACAGTCCGCTTTTTTCTTAGCCTGGGTGAGACCCCCCTGAGGGG TCONS_00052399 . 5' 1039854 TCONS_00052399 . 5' 1039854 EMBV3_37384 GAATGTAACTCGTTTGTAGGTGATGCTCGAATCTGTGACTTTACTACCAGCCCCTCCGGC Gene GeneID:508527|BOD1L:XM_002688464:32_cdna UTR3_Alt 2 NULL GeneID:508527 6 GENE BOD1L NULL biorientation of chromosomes in cell division 1-like EMBV3_07792 CTCGCCTCCAGCTGCCGCCGTGTGTCTGTTGTAATTTATGTGGGGTTAAAATGTATATAT Gene GeneID:504986|LOC504986:XR_084064:565_cdna Constitutive 0 NULL GeneID:504986 25 PSEUDO LOC504986 NULL similar to polycystin 1 EMBV3_41404 ACTTCAGACCAGCTATGGGACGCATGATGAGGAGGGCAGTTCTTAATACAGATGACTGGG Gene BVV0102_100846 + 1 EMBV3_05595 GK000018.2:16864811-17031948 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085633 TCONS_00085631 TCONS_00085632 1 XLOC_051917 Coding TCONS_00085631 XLOC_051917 Coding Coding N4BP1 18:17028337-17050441 j TSS63888 7592 1 TCONS_00085631_8 811 0.126448893572181 7 0.656833913948333 2.64883921350488e-05 3.64946549398248e-05 5.70380095448232e-05 7.86447109668934e-05 2.49377640783186e-05 2.3338539642775e-08 2.33488006680904e-05 1.61099871194688e-06 6.96932794135542e-05 1.36896178769218e-10 1.61813392409174e-18 2.01755501034644e-06 6.2468363568501e-16 2.96835158396712e-05 2.46322725714094e-05 0.000906195388465569 0.000862536554306572 4.89984314419153e-09 3.55109279684716e-05 3.91989137140998e-12 8.54628803491641e-19 9.1379435328979e-07 0.000182295722603509 4.75007236618843e-07 0.000158260850589748 4.48936265546372e-08 2.41948052280316e-05 5.41723524155338e-06 7.7548006043104e-05 0.000221150153419186 NM_001191433.1 N4BP1 Bos taurus NEDD4 binding protein 1 (N4BP1), mRNA. 0.0 7016 99.97 0.512644889357218 NM_153029.3 N4BP1 Homo sapiens NEDD4 binding protein 1 (N4BP1), mRNA. 0.0 4329 83.05 0.54768177028451 TCONS_00085631_8 sp|O75113|N4BP1_HUMAN N4BP1_HUMAN NEDD4-binding protein 1; 0.0 1433 88.29 0.998766954377312 1 coding 0 0 0 0 -0.0206870314318683 0.8751388271447 0.0143863499530409 0.817840102893397 GAAAAATTTTTGTTGTTAAACTGATCTTGTTTTAAATGCCTTCAAAAATCAGTCTGTTTTATCTGGAAACAATAGTCGCAAAGAAAAAGCCAAGGAATATATTAAAGGAATCTGTGAACCTGAACTAGAAGAAAGAGAATGTTATCCCAAGGCCATGCACTGCATTTTTGTTGGGGCACAGAGCCTGTTTCTGAAGAGCTTGATTCAGGACACCTGTGCCGATCTCTGCATTCTCGACATCGGTCTCCTTGGCATCAGGGGAAGTGCCGAAGCTGTGGTCATGGCTCGGAGTCACATTCAGCAGTTTGTAAAGCTCTTTGAGAATAATGAGAACCTACCCAACAGCCAGAAAGAATCAGAGGTAAAAAGGGAATTTAAACAATTCGTTGAAGCCCGTGCAGACAGTTACACAATGGATTTGTTAATTTTACCCACTTCCTTGAAAAAAGAACTCTTGGCACTCACCCAAGGTGAGGAGAATCTATTTGAAACAGGAGATGATGATGTTGTTGAAATTAGAGATTCTGCACAAGCAGAGTTTACACAGAATGCTGCCACAGGGCTGACTATTTCCAGAGATGAAATTGTTTTGCAGGAAGATGCAAGAAATAAAGCGGGGACTCCCGTTTCTGAGCTCACAAAACAAATGGACACAGTCTTTTCTAGTTCACAAGATGTACTTTTTGTTCCAATAAATGGTGTAACCCCAGATGAAGAGGCACTTTCCAAAGACAGAGTTTGTCACAAGAGGAGGTTTTCTGATTCTGAAGAAAGGCATACCAAGAAACAGTTTTCTTTGGAAAATGTTGAAGAGGGAGAGCTTCTACATGATGGTAAGACATTAGCTGGAAGTGTAATCATTGACGTCTCTGATTCTTCTACTGAGGCCGAAAATTTAAGTCCAGACGTAAAAGACACTACTGAGGAAATGGAGTACAACATTCTCGTGAACTTTTTTAAAACCATGGGCTATTCCCAAGAAATTGTTGAAAAGGTCATTAGGGAGTATGGGCCATCTACTGAACCGTTATTACTCTTGGAGGAAATTGAAAAAGAAAATAAAAGATTCCAAGGAGACAGAGAACTTTCACCTGGTACTGTGTATCCAGAGACCAGCAGAACCAAAAATAAAGGTGTCTGTAGCAGCATAAATGAGCTTACAGCAGATTCCACTCCAAAGAAAACACAAACTCACACACAGCAAAATATGGTGGAAAATTTTTCTCAGTTACCATTCAGAGTTGAATCAAAACCATGTACCTCAAATTGCAAAATTAATACTTACAGAACAGTGCCAGTAGAACAGAAACAAGAAATCTGGAGTTCAAATCAGAACTACATTTGTAACATAGACCTTGAGACCGATGGCCCTGTACCCACTGTTGTCCCTTCAAGTCCCAAAGAAGTTGTCAGTTTTGTTTCAAGAGGAGCTTCAAGTCACCAGCCCAGAATTCCGGTTTTTCCTGAAAATGGTTTGCAGCAGCAAGCAGAACCTTTGCTTCCAAATAGTATGAAGTCTGCCTGTGAAAACCGCTCGAGGTGTTGTAGCTCACCTCAGTCTAAGCCCGGCTGTCCACCCCTTTCTCCACCGATGCCACTCTCCCAGCTGTTACCTTCAGTTACTGATGCTAGGTTGGCGGGACCTTCTGAGCATATTGATTGCTCAGTTACGGGGGTTCAAAGATTTCGAGATACTCTGAAAGTGCCCTACAAGCTGGAATTAAAAAATGAACCAGGGAGGACGGATTTGAAGCACATTGTTATAGATGGAAGCAATGTTGCGATTACCCATGGTCTGAAAAAGTTCTTTTCTTGTCGTGGAATTGCAATTGCGGTTGAATATTTTTGGAAGCTCGGCAACAGAAACATCACTGTATTTGTTCCACAGTGGAGAACAAGGCGGGATCCTAATGTCACAGAACAGCACTTCTTAACCCAGCTCCAGGAGCTTGGAATATTATCTTTAACTCCTGCACGGATGGTCTTTGGAGAAAGAATTGCTTCTCATGATGACAGGTTTCTACTACACTTAGCGGACAAAACTGGTGGGATAATTGTAACAAATGATAACTTCAGAGAATTTGTGACCGAGTCAGTCTCCTGGAGAGAAATAATTACAAAAAGATTGCTCCAGTATACCTTTGTGGGGGACATATTTATGGTTCCTGATGACCCTCTGGGAAGAAGTGGACCTCGATTAGAAGAATTTCTTCGGAAGGAAGTCTTCCTTAGAGATATGCAGCCCCTACTCAACGCCCTGCCAAATGTGGGCATGTTTGACCCCAGCTTCAGAGTCCCTGGCGCCCAGGCAGCCAGCACCAGCCACCAGCCTCCGACCCGGATTCAGGGCACCCCACCCAGCCACTGGCTTCCTCAGCAACCCCGCTTCCCACTTTTGCCCAACCTTTCTAACATCCAGCAGAATCTGCCCATGCCAGCACAGAGATCTCCTGCAGAAACCAACGAGCTGAGGGAAGCCCTTCTGAAGATCTTCCCTGACTCGGAGCAAAAACTGAAAATCGACCAGATCTTGGCAGCTCATCCATACATGAAAGACCTGAACGCACTCTCCGCCATGGTATTGGACTGAAGGCTGTTGGGAACTGGGGCTCTGGGCTGAAGACACACACTCAAGCTAGTATCTGCATGTGCCAGCAGGAAGTGACATAATGTGAAAAAACCAATTTCCCAGTGGAAATGCTGTTGTAGTGTATAGGAGAAAAAAAAAACACAGATGTTTTGTGTATAAAAAAAATCTGGGTTTTCAAAACCAGCTTTTTTATATATATACATTATGCTGCTATTACGGATTTAACATTTTCTGTAAAAGGAAAGTCTACATTTTCTGCCTGTTCAGAACTGTTTAATAGCAGTTACTCTTGAGTGCACTTACATTTTTATGTTTTTTAAACTATTTTCCTTAATGCTGAAAATATTGACAAATGGATATGATTAGCCTTTCTTAAAAAAAAAAAAAAAAGTTGCTTTCTTAGGGAAAGCAAGAACTCTTAAAGTATATTTTCTTGAGATGACTATGTCACGTCCACTGACATGAAGTGTGCTCACCCTCCTAGCCTCCTCTACCCTCGCCCCTGGAATTAGAGTCCGTGTGAGTTAATTTTGCTCCTCTGGGGTCTTTGATTGGAGCCATTTGTGAGAGTGGACAGGTGATGCCACTAGATGGCACCTTGTGCCTAGCCACTGTTAATGACCAGGGCAGAGCTAGACGCACGGAGTATCCGGCTGGGAGAACCTTGAGAGCCCACGTAGTCCAGCCCTTCCTCCCTTCCCACCTGGCAGAAGAGGGAACTGAGGCTCCAAGTGCCCTCTGTCTGGACGCGCCCAAGTCCACAGCTGTGAACTGGATCCCTCGTGCATGGCTGGGACACGCAGCACTCAGTCCCTGACTGGCTCTAGAAGTCCCATCTCAGCTTCTGAAGATGCTAGTGGGACGTGAGGAAGTTCAGTGAAGAGCGTCATTATTACAGTAGTTTGGTGTCCACAGCCTTGGGAGATGCCCCATGTGAAGTTTGTGCAGCTTTGCCAAAAAACTGGTTTTCTATTCTCAAGAATGACCCAAGCCAATAAATAGCATTAGTAGCTTCTGTGGGGGCCCAGAGCCCTGTATTTATTTTTCCTGTGTTAATCTCTTTAGTGTTCTCCTAAGCTGCCCTTCCTATGGGTCTGTCTCAGAATTGATATCTTAGTATTGTGTTTTCAGTGTTGCCTAAATTCTGTGTCAGTGAAAATTCTTTTTCTGGATAATTAACTGTTAACATCTTTCTTGTTCTCTGGACCTTCAAAGGGCTTTGTATTTAATACTTGCTCTTTTCCCAGGCTGCTCACGATCAGTTTCACATCTGCCTTGTAGATCACATCTCTTGTGGCCCCCAGAAACAATTCCAGAGGACTCAGTGCCAGTTCGTTCTTCATGGTGAAGGGACTTAGTTGGCCATGAGCAGACCTGGCTGGCTCCCCCCAGTGCTCCCTCTAGGCATGTATGATCCTGCATCCCTCCAGGGATGAGTCCAGAGTCCTCAGGTGGCCAGATTTGGACTTCAGTCACTTTTTCTCTTGGATGCCTTTAAGATGCATTCTGGTGTGGAGCTGGTCGTCAGCTGGGGGTAGGATACCCAAGTCATCCAGCTGTGCACGTGGAGGACAGAAGGCAACTTCAGTCACAGTCCCTGTGCCTCAGCTTCACAAATGATGGTTTTAAAAAACAACAGCAGAGGTGTGAGGCCTGGGTCCCCCTCACAGTGACTTTACCTTCCAGGTCAAGTGGCCGTGCCAATCCAGCACTGCTGCTGTTCAGAGAAGGACCCGAGGGGCATGCCTTGATTGCCAGGACTTACCCACTGGTCTTCCTGGGAGCGGGGCTGAGGTGCCACTGATACTGGGTAGAGCTAGCTAGGCCTAGAGGTCAGGAGTTTTCTAGGCTCTAGAAGTGACCTGACCTTTGAATTACATAAGCCTCTGTGATCTTAGTATTGTCTCTGAGAGCTCCACCAGCCCTTTCCTCTTTCTTGGGTGCAGGAAGGAAGAGTGCGGAAGGTAAGTGGGAGGAGTTTCAGAAAAGCATTACTTACTTACCTTGATAAATTATAACATGAAACAGAATCCACAGTTCTTTCTGAAATCTGTCAAGTATAGTTAAATTTAATATTTTAAAGCTCTGTTCTCAAACCATTATTTCAAGAAGTCATGACTTGTTCTCAGACTCCTCTTAATACTAGGCTCAGTGTTGATACTCCCGGTCTACCTCCCCTGGTAGGTTTTTGGAACCACCTTGGGGACTGTCTGTAGCAGTGTTTCCTGTAACTCCTCCAGGTGACTCTGCATCCTGTATTCCATGGCATTTCTGTGAAGCAGGAGGCAGGGCAGAGGGTGCCACCCTCCTTCAGTAGACTCGGAGAAGTTGTCCGGAAAAGAATAAGTAGGCAGTGATGCTGAATGATTTCTGGGCCTACATTCTTCCCCACACCCCAGACTGCCACCTGGGAGCAGAAAGACTGGTTTGGTCTTTCTGTCAAGTAGCCAGTGTTTGAGACCCTACAGTCCGGTGGCTAGAAAAACAGTAAGAAGGCTCGGCCGTCCTGGATGAAGGGTCAGCATTGTTCTGGCAGGCTTAGCAGCGTGTGGCTGTCACCAGGGACTCCGCTGACCTGTTGTAGCTTTTGGTGTCAGTGAGAGGAGGGATAATCTTGCTTTATTGCTTAGGCTTATTGTGGCATTTGTGGAATATGATCCACACATAGAATCCATGATGCTCTGAACCCCCACCCCCACTGAGTCTCATGCCCTTCCCCCCACCATGGCAAATGGCACTGGGCCCCCTGGAGTTGGGCCTTGGCACCACTCCCACCTCAGGCCCAGCCTGCCTCCCACACATGTCTGAGACACAGCCTTCCTTAAGGAATTTCTCCCCACCTCTACCTCCCCAGCAACCCTCTACGTCCCCACCTGTCCTCTTCCATCCTGTGTCCCTTAGCCCATCTCCTCTCATCTCCCAGCTATAGTTTGTTTGGTTAGTTACTCTGACTACCCCATTTCTTCGTTATCTACCTCTCTCATTATTCCCTACATATTTCACATCCTGAGATTAAAACAACCTGATTTCCCTAAGGATCTCTGTTCATTGCTACCTTCGTTCCCCTTCCCACTTTTCACTTCTGTGTCTGCAAACTTGGCCTCCACCCCATCACATGGGATGAATCGAGGGAAGTCATTGGAGACCAGTCAGTTTCCAAATTCGGAAACCTTTTCCCAATCCTGAATCTGCATGTCCACATTCAGTAACCATAGCATGACGTTGTTGACCCTTCAGTTCAGTTCAGTTCAGTCACTCAGTCCTGTCTGATTCTTTGCGACCCCATGAATCGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCATTCAAACTCATGTCCATCGAGTCGGTGATGCCCTCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTTCTAGCATCAGGGTCTTTTCCAATGAGTCAACTCTTCGTATGAGGTGGCCAAAGTACTGGAGTATCAGCTTTAGCATCATTCCTTCCAAAGAACACCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGATTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGTGCTCAGCTTTCTTTACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGATGGACCTTTGTTGACGAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATCAGTTTCCTTCCAAGGAGTAGTTCAGTTCAGTCACTCAGTCGTGTCCGACTCTTTGCATCTGTTGACCCTTACTTTCCCTATTTTCTGAGATTTCCCTCACTCCTAAACAGTCTTCATTCCTTTTCCTTCTTTGACCTAAAGGCCAGTTCAGCAGAAAGACCAGCTCAATAGGTGGTTTCCAAACTTCAGACCAGCTATGGGACGCATGATGAGGAGGGCAGTTCTTAATACAGATGACTGGGCACTACCCAGAGGTTTATTTAGTAGCTCTGGCGCAAAGCGTGGAAATCTGCCATTTCAGCAAATTCCCTGGATGGTTCCCACACAGGTGGTCCATGGACCACATTTTGAGACACACTCACCCTTAGAGATCAGCACACTTCCTTGACTCGAACCACCCCCTCTTTGCTGAAGTGACTCCCAGCTCCAGCCCTGCCCCTTATGAGTGCATATTTAGGTCTACCTAGAAGCCCTGAGACATCCCCAGACCCACTGCCCCCCAGACCCTCTGCCTGCATCTGTTCTCTTGTCTTTTCCCACCTACTCTGCCACAAGGTCCCCGCATCCACCGTTGTCCCTTTTTGGCCATTGCCCCCCACCCCGCATCTTGTGCTTATGGCCTCCCTGTGGGCATCAGCCTCTGACCTGTCAGCCCACCTCACAGCTTTCCCGCCTCTAACTACCCCCTTGAGACTGCACAGCTGCTAGATTTATCTTCTGAAGATACGCTTCTGCACACCCCTGTTCTTGCAGTGACCAGTGGCTCTCTTGACCAGAGTATCAAGTTTAGACCTTCCTGAGCTTAGTATCCTTGGCAGTCTACCTCCCAGTCGTACATGATGGCCCACTCTGTATAGCCCATCTGTCCACTCACTGCAGCCGCACAATTTCCTCAGTTACCTGTGGGCTCCCACTCCGAGTGAATCTCTTCTCTGCTAAAAATGCCCTTTCTCCCAGATGGCTTCCCCCTCAAAGGCCCGGCCCTGGGTCCTCTGTACCCTTGCCTAAAGCTTCTGAGCAGAAGCAGCCTCATGGTGTCTTGTGACCCCACAGCACTTGTCTTGCTTTCGGCACTTGCCGCTCTGGTTGGTGTCGCTGCGGCTGATTGTGTGCTCTGTCTTACCTCTCTTTCTAGACTGTGAGCTCCTCGTGGGCAGGGCTTTCTGTGTTCACTCTCTGTGTTTCCCACGGCACCTAGCGCAGTGCCTTGCACTTAATAGGTGCTCAATAAAGTCTGCTCAATTGAACT EMBV3_14220 GCTGCTATGTATGGATTTAAATCGTAATCATATTTGTTTTTCCTGTATGAGGCACTGGTG Gene GeneID:359718|RTN4:NM_001075138:45_cdna Constitutive 2 NULL GeneID:359718 11 GENE RTN4 MGC139261 reticulon 4 EMBV3_03728 GTCCCCAGTATCAGTGATCTCACAGTCTAGCAAGGAGAGCAGACACACCGCTACGTCTTC Gene GeneID:511988|TRUB2:NM_001110073:67_cdna Constitutive 3 NULL GeneID:511988 11 GENE TRUB2 MGC140821 TruB pseudouridine (psi) synthase homolog 2 (E. coli) EMBV3_04996 CAGCTGAGTCTGTCAATCAAGCCTATAACCTGGCGCTCGACATGCAGAGGCACATTTCCA Gene GeneID:100300956|LOC100300956:XM_002698099:138_cdna Constitutive 0 NULL GeneID:100300956 25 GENE LOC100300956 NULL hypothetical protein LOC100300956 EMBV3_35836 GTCAGTTGTCCTGGGTTCTCTGCAGCATGAAGCCCACACACCCCTCTGCTTGCCCCGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33749 CTGTGCAGCTACTTCAGAAATTGAGGAGGACTTCCCTGATGGCTGGTGGCACAGTGGATA Gene BVT0102_075676 + 0 NULL GK000025.2:37463898-37469323 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147217 TCONS_00147218 1 XLOC_089317 Coding TCONS_00147217 XLOC_089317 NonCoding Coding - 25:37466242-37475379 - TSS109896 626 1 TCONS_00147217_1 75 0.635782747603834 3 0.93180823117338 5.4633724590372e-05 0.000355029479744933 0.000324356912805501 0.000146334513304419 0.000361536803847006 0.000670142305578757 0.000196097616145574 0 3.30872566804782e-196 6.24249105104598e-05 0 0 1.49427523766755e-68 3.70111126718904e-69 0.000210058640903059 7.43603494145159e-103 0 0 8.40066571526473e-109 1.68335761364349e-83 0.000258988781210826 0 0 0 7.29939330916635e-05 0.000431564404565579 0.000515927612660637 2.68294450092785e-05 0 0 XM_005196994.1 LOC101910028 PREDICTED: Bos taurus zinc finger protein ZFP69B-like (LOC101910028), transcript variant X1, mRNA. 4e-86 322 100.00 0.282747603833866 NM_153711.2 FAM26E Homo sapiens family with sequence similarity 26, member E (FAM26E), 6e-08 62.6 81.43 0.105431309904153 0 noncoding 0 0 0 0 -0.177454332693151 0.169167785697791 0.0158877357061826 0.767988930562002 GCACAGAAGAAATGGAACCTATTGGAGAGCTTCTTCCTGTTGAGTTCCAGGAATTGACAACAGTCAAGGATGAGGAAATGGACTTCACCTGTGTGGAGGAGGAACAGATGAATTCTGCCCGAAGACACATGGGCATGGATATGAAGGTGGAGAATTGTGGGAACCTGGTATTTTGGGGCTGTGCAGCTACTTCAGAAATTGAGGAGGACTTCCCTGATGGCTGGTGGCACAGTGGATAAAAATCCTCCTGCCAATGCATGGGACACAGATTCGATCCCTGGTCCAGGAAGATCCCATATGCTATGGAGCAACTAAGCGGGTGCACCACAACTACGGAGCCTGCGCACCTAGAGCCTGTGCTCCGCAGCTAGAGAAGCCACTGCAGTGAGTCTGCACACCACAACAAAGAGTAACCCTTGCTTGCCTCAGTTAGAGAAAGCCCACGTGCAACAATGAAGCGCCAACACAGCCCAAAATAAATAAAAAACCAAAGAGAAAAGCCCAAGTTAAAAGATACTCCTCTGCACTTATCCCCTAAGAAATTCCAAGCACTTTAGGAACTCTGCCAGAAACAGGCAGGAAGACCAAATATACATTTCTTATTTAAATCACAATATCACAATGGG TCONS_00145434 TCONS_00145435 TCONS_00145436 TCONS_00145438 TCONS_00145440 TCONS_00145441 TCONS_00145442 TCONS_00145443 TCONS_00145439 TCONS_00145437 r 3' 2346 TCONS_00145434 TCONS_00145435 TCONS_00145436 TCONS_00145438 TCONS_00145440 TCONS_00145441 TCONS_00145442 TCONS_00145443 TCONS_00145439 TCONS_00145437 r 3' 2794 EMBV3_22519 GCTACACCTGACTCACTGGTGGCTGGAATTCAACTGCCACAAAACAAGAAGGTTCCGGGA Gene GeneID:513719|HMG20A:NM_001075637:82_cdna Constitutive 0 NULL GeneID:513719 21 GENE HMG20A MGC140640 high-mobility group 20A EMBV3_13320 CAAATTGATCCTGCCCCCCAACCCAGCCTTTGGCTTTGTAACTTGTCCCACCTGCCAGGG Variant GeneID:508269|TMEM106A:NM_001014870:82_cdna 220^303 1 EMBV3_16303 GeneID:508269 19 GENE TMEM106A MGC137678 MGC20235 transmembrane protein 106A EMBV3_13796 TGCTGCAGAACACAGAGAACACGAGCAAGGAGACAGAGCCAGATTGTTTAGAGGTGAAGG Gene GeneID:282577|GJD2:NM_174683:25_cdna Constitutive 0 NULL GeneID:282577 10 GENE GJD2 Cx36 GJA9 gap junction protein, delta 2, 36kDa EMBV3_34283 GACCCAGGTCCACCTCGTACTGTTTCTCCACCTCCTCAGCCCGATTCTTATAATGCTATT Gene BVV0102_010098 + 1 EMBV3_10976 GK000029.2:5618338-5649510 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34068 AGGAACTGGCCTTCTACAGAGGCTACTACAGAGATCACGTCGACAAAAGTTTCCAGGAGG Gene GeneID:513210|LOC513210:XM_002686507:649_cdna Constitutive 0 NULL GeneID:513210 3 GENE LOC513210 NULL similar to fatty acid amide hydrolase EMBV3_32111 AACCGGGTGGTCAATTTCTTCCTCCTACAGATGTTACTCGCACTTTCTTGACCACAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14192 ACTTTCAACCTGTCCTCAACTAAGAGCCTTCAGATGCCCAAATATTCTGGCAAGTAGCTG Gene BVV0102_274421 + 0 NULL GK000007.2:84567113-85222950 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217858 TCONS_00217860 TCONS_00217862 TCONS_00217861 TCONS_00217859 TCONS_00217863 1 XLOC_131595 Coding TCONS_00217862 XLOC_131595 Coding Coding TMEM167A 7:85216431-85267685 = TSS162134 8111 3 TCONS_00217862_10 80 0.108371347552706 4 0.841823893235518 0.000225981439357282 0.000139865178021226 0.000315238573867884 0.000240693140885899 5.97519011451833e-05 9.36986144176691e-05 0.000145031213050252 0.000115547743207373 0.000300087915991259 6.43348396991674e-07 1.75684867641473e-06 2.51160568984347e-05 5.77350829265153e-05 5.93144531974835e-05 1.48630185716023e-07 0.000134831935331785 9.63185333069608e-12 3.13138748395074e-07 9.9524163203728e-10 0.000137795171270683 5.05818633600308e-05 4.25682290906827e-05 0.000171470510443209 0.000395099196180668 9.47134601364607e-05 2.02944791833006e-07 5.42982150076335e-06 1.74932303519875e-05 3.02528158110145e-09 0.000318941068609693 NM_001114511.1 TMEM167A Bos taurus transmembrane protein 167A (TMEM167A), mRNA. 0.0 2771 100.00 0.189249167796819 NM_174909.4 TMEM167A Homo sapiens transmembrane protein 167A (TMEM167A), mRNA. 0.0 1718 74.67 0.315127604487733 TCONS_00217862_2 sp|Q148I3|KISHA_BOVIN KISHA_BOVIN Protein kish-A; 6e-46 145 100.00 0.986111111111111 1 noncoding 0 0 0 0 -0.0467744467709347 0.756695160266855 0.0121647346401112 0.790868084485007 AGACCGCGGGAAGGGGAGAGAAAGGCAAGCCGGCCGTGCACGCCTCTTCCGCCCTGGGCCCGGAAGGGTGATGTGGCTGGGGCTTCGCCGGCCTCACTATGTCTGCCATTTTCAATTTTCAGAGTCTGTTGACTGTAATCTTGCTGCTTATATGTACCTGTGCTTATATCCGATCCTTGGCACCCAGCCTCCTGGACAGAAATAAAACTGGGTTGTTGGGTATATTTTGGAAGTGTGCCAGAATTGGTGAACGGAAGAGTCCGTATGTTGCAGTGTGCTGTATCGTGATGGCCTTCAGCATCCTTTTCATACAGTAGCTTGGAACAACGCCAGAATTCCAGTCGCTATCAGATTTAAATATGACAAAAAAGGACTGATCTGCCGAAAATAGTGGAAAGAATGGTTAACCCTTTTATCTCTCAACATTGAATGAGCTACACTTTCAGCTGCTGTTCTCCATTTTTGTTATTGGACCAATGTTCTATATAAATAATTAGGATGTAACATTTAATACGCAGAGTTGAAATGTGTCTGTAACAATCAACCTCGGTACTGTCGCTACAATATTACATTCTGCATATGTCATTCTTTTGTGCTAGATACCAGTCTTTAGTGAGGTATCTTTAAGGCACATAGTAGAAAACAAAATTGGCAAATTATTCAAGTTCCTTTCACTGTGATTTGGAAATGATAAATCTTTATAGAATGAGACCTTTTTTTCAGACTAGCTTTTTTATTGGAAAAAAAAAGGTTCAATTTGTGTTGGTATAAGGATTGCATTCATATTTAATAATGCTGGCTTTTCCTCTGGCCATACCATTTTGAGCATTAACCAGAGTACCTCTACTCTTAGCAATCTGTAGTTTATTACAGGTGTTTAAACTATTTAAAACAAGCCTATGTAGTTCTTAAGGAGGAAGATAGATGTGACTTCAGAGAAAATGTTAAGACTATTGAGAAAATGCTCCTATTTAACATAAAATAATTCAGAATACCTGACTGGTGTTATTATCTCTGAAACCTCTGGTTAAGTATGGATAAATGTCTTAAGCAAAAATTTGACCAGCTGTCATTCTCCAAATAAGACTACATGCTTAGAGTAAAAAGAGCTAAACAGAACAATTACAGAATGATAATCTTGGATGTGTTTTTCATTCTTTTTAGTGTTAGGTCTGTACATTTTTAATTACCCCAAAATACAAACTGTGTTTTTGTTTATTTAATACATTGCTCTCAATCTAGTTTATGTTTTCTATATCAACTTGAACTGGAATCTTGTGTAACTTAGTAAGTGATGATAAACAGCTTTCAAATCTACTTACCATATGCCATGACATAAATGTCTTTGAGTTTTGTTGATAAAGGAAAACCTTCAGTAATTTTCATCCAGGCAACAGGAATTTTGGAAATGTGACTTACAGATTTTGTAGTAGAGCAGTTATTACACATTTATGGTTAACATTTAAGGTTCAACCAAAATTCAGTTAAAATTTCAAAACGAAGGAGAGCTTCTTAGCTAAAAATTGCCTGTTACAGTTTTAATTAGATACTGTTGTCAGCTATTAATTGCCATAAAGATAAGACTAAACCTTTTTTGTTTTGTTTTGTTTTAAGAAAAAACTGTTTGGAGTTATTATAAAATGAGCCTGCTAGTAGCTCTTTCTGCAGAAACAAAGTACGGAACTAAAAGTCACTTATTTTTATGACTACTTTAAGGTGCTTAGTAAGAATTCTAGGAAACATCTAAGAAAATCTTGTTACATGTTGCTGGGTTTTTTTTGTTTGTTTGTTTTTTGCAAAAGATGAAAGCTTCTGTAGGCTGTCAGTATCTTTTTTATTGTACATTTCTGGCTTATCTATAGCTGATTTAAATGGTATATTTTGCCCTAGACAGGTAATCAGGTTATGACAATTATTCCTACCTGCACTGTCTCTTGGGCTTTTGCATTAGGTCAAGGATTTTCAGGGTATTCCCCAAAATAGAACTCTTATCAGCATACAGAGAGTAAGTAACCTTCCTGGGTCTAGTTTCTGAGTGGCCATCTGTTGTCCAACTCTGCTGCCAGCTAGGTTTTCCTAAAGCTATGTCAACTAACTTTTTTAGTTGTTTACTAACACAAAGCTAATATGAAGAGGGCAAGAATATTCTAGATAATCAGTTCTAGGCTATCTCTTTAAGTTGGAATTTCAGAGGAGGTAGGTGGAAGTAGAGGTAGAAATAATTTCTTTGGAAAATTTATGGCAACATATAAGCATTTTTTTTTTTTTTTTTTTTTCCGGGTATAGGTGCTGAACAAAGTGGGAAACAGCTTATTTCTGACTCCATTCTGACTTTTTGAAACTTAAGATCTTTGGGAGGTGGGAAAAAAAATCACAGGATTCTGTGGGGAAAAAAGGCAGTCAGCATATTCTTTTTTTTTCAAAGAGTTACCACTGAAGCCTGTTGTCTAACCTAAAGGGCAGAGAAGATAGTTAAGTAGTCCACAGAATATTCAGATACTCCTTTTGTGGTCTTAACAGGTTGCAGAAGAGGATTAAGGATCAATTTAAACATCAGAGGTTCTGCCTGTATCACATAGTCTTGGTGCAAGACCGGATGGGATGATGGGCACTAAAGTCCACAGTTTACTAGATTTGAATACTCTCCCTAATCTCCTTCCTGGCTCCAGAATCTTGATTCCAGCTTGCTTGGAATTTTTGTGTTGATGTTTAGTTCCTGATTGGCTTCAGCTGTACCAATGGCAGGAGCGTATCTTCTTTCCAGGCAGTCATAAAAAGACGGTCAAAAGAACACATAGTCTGTTGAATTCCATCTGTGGCTTAAAAAAGTTTAGATACAAGTCCAGTATCCTGTTAATGCTTATGCTGCTATGCCAGGCACTACTATCCTAAATGTTCTTTGCGTCATCAAGTTCAAAAATAGCCCTTTTATGCTGGGAAAAGTAGTAGTATGTAACTTGTAATAGACACCATCATCTTAGTAAAATGCAGATCAATCTAGTCCTAACCTAGGACAAAATAGAGGTTTGAATGAAATAACTTCTCTAAGTTCACAAAGTCAAAAATGAACAGATCTCAGGCTAGTTTTGTGAAAAAACCTAGCACTTGTAAATAGAATATTATTTATATTTCAACATTTCTAAGAGGCATTAGTAGAATGCCTTCGGTCTATTATCAGTGAAGATAGAAAGACAAGTACAGTTTCTTCACTCTAGTGGTTCATAATGTAGTGGGTGAGAGAGAAATAAGGTTATTTATATGAAGTACAATATGATAGGATTTACTACCAAGATAATACCAGGATTCTAGAAGAAAATAAAAAGGTGATAGTTCAATCAGAGATATGAACTTCCTTCCAGAGAAGCAATGCTTAAACTGAATTTAAGAGCAATACGCAAATGCACCAGGGATATATATTATGGGCCATCAGAACGTTGATTGTTGTGAAAGCCACTTAGGAAGTGGAGTTGAGCCGTGAACAACACAAGTTTGAATTGTGTAGCTCCGCTTACATGTTGGATTTTTTTCGGTAGTAAATGCTTTAGTAATAAACAATCCCAAGTTGTTGAATCTGCGGATATAGAACCATGGTTATGGAGGGCAGACTGTAGGATATGCATAGATTTTGGACTGCATAGAGAGTCAGCACCCCTTACCCCCTCACTGTTCAAGGGTCAACTACATTAAGACATAAGCCTAGAAAGGTGGAGAGAGGTTAGATCCTAAAGGGTCCTGTATTTTTCTCATTACCTACCTCAAAATTGAAGTGGAATGTGTTTTCTCTTGCCTGACAAAAAAAAATGTAGGGAAAAAAATTCCTTGCTTGGTGTATGTGTAAAAAAGATTGAATATATCCATGCCAACCTTATTTTAGACCAAGAATACAATAGCATCCTCTTCAGAGACACATGCATAGCATAGAAAGCCAAGGTAACTTACAAGTGAGGTCAGGTAGTCTTAGGAACTTTGCAGCTCATACTCTATCAATGCCAAGGGTAGTCAGGATTATTAAAGCACAGGTGCAAACATGAAGGTGGTTGTAATTTCTACATTTGCTGGGTGCACAGAAGAGATTTCCAGTCTTTTCAGTCTAAACAAGGAGATGTGCTCCTTTCAAACCCTTTGAGAAGATACTGTATCACAGGAAGTTGAAAACAAGAATGAAAGATTCTTACAGACCCCCTTTTTTTACTTTCCCTGTTAACTAATAAGAGGAGATGAACAAAAGAAGTGGGCTTCCCTGGTGGCTCAGTGGTAAAGACTCCACCTGCGATGCATTAGACACAGGTTCAGTCCCTCAGTTGGGAAGATCCCCTAGGGGAGGAGATGGCAACCCACTCCAGTATCCTTGCCTGGGAAGTCCCATGGACAGAGGAGCCTAGCGGTATACAGTCTGTGGGGTCTCAAAAGAGTCAGAAACAACTTAGCGACTAAACAACAACAAAATTAATACCCGAGTAATAGCATTTTTAATACTGTACAGCCTTGTTACTCTCAGTCTGCCTGAGAATAACTACTAGCTACTAGCTTCTACTGCTATAGAAGTAGTAGATACTACTAGCTTCCAAAAATAGCTCATGATTGTGCTATATATATTGCCTTCCATGATTTCCTTTACTTGGCCCTAAACCAGTTCCAAGATGGTAGTCTGAAATGCCACTAAAGTATTGCAAAAAAGAGGGTAGGTAGAAATACATTTCCTGTGATTTTGAGAGTACAAAGAAGCATCCTACTCTCTGGTTAGTGTACATATCTGTGGTGTGTAATAAAAATCAAAATGAACTCACAAGAGCCTCCTACTTTTGTCTTTGGTCAGATGAATGAGGGTTGTTTTAGAAGTTAAAAGTATTGAAATTGCCACCTTTTGAGTAGGATGCAAATAGATATGTTTCTGTTTTGCCTGCATTTTAATTTGTGGCTGGTCAGGTTTGGTTTGGGGGAGTTTTTGTATTGTTTTGCATCTTAAAGCTGTTCAGTCTATAGTATTACATTGCTCTTTCTTTGAGTGAGCCTTCAAGAGTCTAAGTGACTAAATACGAAGTCATGAATTCCCTCCAGAGATTGGAAATCTGATTCTGAGTGAAAGTGACAGTTAATTGTTGAAAATTACTTTCAACCTGTCCTCAACTAAGAGCCTTCAGATGCCCAAATATTCTGGCAAGTAGCTGTCAAAATCTGTGAGCAATATCCATCAGAGTGAGATTATTTAACCAATTTATACCATTTGTTGAAAAATAGGAAAAAAACATACATGTACTATGTGCCTTGCTTTGGATAGCATGGTCTTTCTACTGTTAGCTTCCCAGCCCTCCATTTACACAAACAAATCTGTTAGACCTGTTACTGGAAAGAATTGACTTAACCAAATGAAATTACAACAACTGTATTTTTAGTTGAGTTTAGAACTCAAAAAAGTACTTCAGATAAAAGTAGAAAACCAATATCCTGGTTGTATCTTCAATGTATAGTTTAAACCACCCTCACTGCTTCATTGTAACTACCAGTTGATACAAGACTGGTTGATGTAAGACTGATAAAAATCACTAAATTTCTGATTTTCAACTTATGTCAAAAGAATTCAAAATGGCTTTGCTTGGGACTATTGAGTTTAACATAGTAGGAAAGCAAAATCTGTTTTCTGTTCAAAGGGTTTGCATTAATATCCTCAACCATAACAGAATTGCTGGGAGGGAAAAAAAGAGAAACATAATATTGGAAATAAGGGTAAGTCACTTCACACATACTTTGTAGAGAATGAGAACACACAGAAGCTGCAAAATAGCCCGACACTACTACTGTTAGAGCTTTGTTTGGCAAGGGAAGTAGCCTAGGAGCAAATGTGTCGTGATTGAGGTTTTGTACCCAAATTGCTAAAATGTACAATTTATAAGCCATTTCAATATTTTGGATCAAGTAGTATGTCTAGGCTAAACGCTGGAAAAATATTTTACAAAAATACTAAACTGATTTAAAGATAACATTTAAGGCATAAGGCATTTCAAGAAGGAATCAAAAAAGGAATATTTCCAGTAGTGAAGTTTTAAAGAGATCTGCAAACTTAAGGTTTAACACCAAAAGATTTGACATTGGAGACAAAGTTCGGAAGACAGAACACTATAACATTTCATTAGGGCCTTTGCAAAACAGGATACGATGTTCCTTTTGATTTTATTTAATAAAAGTATTGTTTATTCTTTGGTCACTTTGTAGCTAATGTTATTCCCAAATGGAGGAAACTATTAAATCTTGGAAAGTGATGAGAATACTTTGACTTACAAAATATGTTTAAGAAGTTTGCAGTATGAAATTAAGAGAGCTGTAGAATGCAAAATATAGGATAATAAAGTTGGATGAGTTTTTAGAAAATTTAGTTTTATGAGTATGTGATCTAAACCTCATTCAGATCTCTAATGGGTCACTATTCTGAGCTTTGACTGAATCAAACCCAAAATAACATATAGTAACAATAGTTCTAAACCCATAACTTAAAACTGTAGTCATACTAAACTGGCAACTCCAATACTAGTTTTTATATTTAAGAATTGCCCTCACAAGCATCCCTGGAAAGAGATGTAATTGAATCTCTTAACATTTGGAAACTGGACATAGAAAACTATTGAGATGGCTCCTGAATCACTGGGCAATTAATGTGACTTGCAATGAAGAACAGAAATAAGGGTAGAATTCAGGATAATCTTTATACTCCCAAATAATGGAAAAGTAATCCCTCTTACGTGTCTGCCACACAAGGTAGATTCCTTCATAACTCCTTTTCTGTTTCTAGAAGAATCCTTTGAGAACTGGCTGTGTGCCAGGGTCAGTGTATCCAATGTGGAACAAGACAAAGCTGCTATCACAGAACCTAGAATCTAGTGAAGACCAGCTAACCAAAATAATTAGGTAAGCATACACAACCTCTAGTAAGGACCTTAAAGACACCAAAGGATGATTTAGATGGAGTAGTCAGAGAAGGCCAGTCCATAAAATTGATAACTGGGCTAAAACTTGCAGATGAAAAGAGCATGAGCCAGGAGTCAGAAGGAACAGCATACTTGAGGACTGAGAGATGGGAAAGAACTCAGGACTTGAGGTGGAGAAATTGATAAGAAACTAGCATGAACTGAGACAAAGAATGGTGTAAGTTAAATAGAAAAATGGACCAAATTATGCAGTTGCTTTGAGCCATAGAAAAGACTGGGAGACTCGTATAAAGGATGAATCAATAACTTGATTATGAACTTAGAGGTATAGGGTCTATAAGGCTGTCCTTGGATCTCACTCATATTGCAACTAAACTCCACAGGGTAGGTAATACGGAAGGACAGGCAAGAAGCCTCAGGATGGACTGCAACCAATGTCAGTTATTGCTCTAATCTTGATGCTGTGGATGTCCTGCAGAAGGAAGCCAGTGCCCATCACTTCGGAGCTAAACACAATTTTCAGTTTCAGAAAAACTGAAGGAGAAAGTGGAATAGTTATAGGTCAAGCCATTGCCTCATGCTAACAAGGTTAGTGCATCTGTGACAACCTGTGTGAACTAACAAAATGGTGGTAGCTTCACCTTTGCCCCCCAAATTTCACACGAGACTGTCACGTAGCCCACTCAAACCAAACTATAAGAAACTAAGAATTCTAAAAAATGTAGGATGGCCAAGCTTGCAATGTATCAACCAAGCTGACACATTACAAGAGCATCACACCCTCTTAAGACCCACTTGTATGGCCTCCCAGCAATTCAAAACATTTTCGAAACAAAGCTGTTTATCCCTTCTAAATCTGCTTCTCTGACTTTATTTTTGTAAATAGTACAACTTTCCTTCTATTACTGAAACTCTCTAACCCCCTAAACTCCTCTTTGACTCACATCCTTCCCTTGCTCCCACCAATCCATAGTTGTTGTTGTTTTTAACCTCTGCAGTGCCTACCCCGGGCATATGAGTTCAAACTCAACAGGTGACTACACAATCCCACACAGATTTCAGATTCAGTTTTATATAAGCCTCATTCTGGAACCCCAGAAGTACAACACGGGCATTCTCCCCCCACCCGCCCCAAAGACATGTACAGGAGAGTGAGTTATGGCAGAGGAGCTAGCATACTGTTTTCATATT EMBV3_36604 TCCTGGAAATGTTTGGTCCAGAAGGAGCGCTGAAACATATGCTGAAAGAGGGGAAAGGCC Gene GeneID:100125779|PCYT1A:NM_001105052:2_cdna Constitutive 0 NULL GeneID:100125779 1 GENE PCYT1A MGC137206 phosphate cytidylyltransferase 1, choline, alpha EMBV3_27826 CTCAGACACGGGCTCTTCGGCAGCATTCCAGAAACAGGAGGGGGGAGAGAGTGATTTCTT Gene GeneID:538959|EPB41L2:XM_002690221:10_cdna UTR3_Alt 2 NULL GeneID:538959 9 GENE EPB41L2 NULL erythrocyte membrane protein band 4.1-like 2 EMBV3_22538 TTGGGCTCACAGATGGATGGTCCCACAGCAATCATTTCACTGTCTTCCCTCTCCATGTTG Gene GeneID:513376|STBD1:XM_002688357:161_cdna UTR3_Alt 1 NULL GeneID:513376 6 GENE STBD1 NULL starch binding domain 1 EMBV3_10339 GGCCCCACCCTAACCTTCCGGATCAACAAGGTGAACCTGAACACCATCAAGCGCTGCCTT Variant GeneID:522370|PPAN-P2RY11:NM_001046261:65_cdna 385^555 1 EMBV3_14450 GeneID:522370 7 GENE PPAN-P2RY11 MGC137466 PPAN PPAN-P2RY11 readthrough EMBV3_29647 GGGATCTAAACTTATCCAAAAAGCTAGAGAGGCACCATTTGTCCCCATTGGAATGGCAGG Gene GeneID:100335275|LOC100335275:XM_002690990:278_cdna Constitutive 0 NULL GeneID:100335275 10 GENE LOC100335275 NULL HIG1 domain family, member 1D-like EMBV3_30698 TGAACACCCACAGAGGCAACTTAAGGGCAGGAATGGCCGTGAAGATGCTGGTCATAGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01403 TGCCCTTGGGAAAGATAGGAAGGGGCTTCAGCAACAAAGACCCCGATTTCCACGATGACT Gene GeneID:100298347|LOC100298347:XM_002694145:532_cdna Constitutive 0 NULL GeneID:100298347 16 GENE LOC100298347 NULL similar to SYnapse Defective family member (syd-2) EMBV3_41633 ACAAGAGGACACTCAAGTGCCTGGCCTACGACTTCTACCCACGAAGCATCGGGCTGCACT Gene GeneID:508800|AZGP1:NM_001034331:125_cdna Constitutive 0 NULL GeneID:508800 25 GENE AZGP1 MGC126975 alpha-2-glycoprotein 1, zinc-binding EMBV3_24443 GATACAGGAGGGCCGAGGAGCGCTCCCTGACTTCGACATCGAGATGCTGAAGGTGGAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06348 CCACCTACCTTTCTCTGTTTCTAGCTCTCTGTTTGGAAACCCTTGGTGGGAATGGACTGG Gene GeneID:281054|CD3E:NM_174011:5_cdna Constitutive 0 NULL GeneID:281054 15 GENE CD3E NULL CD3e molecule, epsilon (CD3-TCR complex) EMBV3_11379 ATCTACCGCGATCTATGGATTTTGAAGAGGCAGAAAGAAGTGAGCCAACTCAAGCTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31352 CCGCTTCTGTCTAGGCTTGCCCTGCTCCTAGTCGCTCTAACTCCCAGAGAGAATAATAAA Gene GeneID:528741|KCNQ4:XM_002686538:759_cdna Constitutive 2 NULL GeneID:528741 3 GENE KCNQ4 NULL potassium voltage-gated channel, KQT-like subfamily, member 4 EMBV3_24557 GCTCCCAAAACCCCCTCATCGTCTAGGAAGACCAAGAATGAACTGGAGACATTGTGTGCA Gene GeneID:513215|C10H14ORF53:NM_001075604:103_cdna Constitutive 0 NULL GeneID:513215 10 GENE C10H14ORF53 MGC134417 chromosome 14 open reading frame 53 ortholog EMBV3_04761 GCCTCCGCCTCAGTATCGGCTCTGATTGGAGTCGGTGAGCTGGTAAAGGTTACGAAGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02949 AGTGCATTGGGCTTGAGTCTCTGAACGCCGTGGACCCATTAGAAGACTGTTTTGATTGTC Gene GeneID:541068|SPIN1:XM_002683680:4_cdna UTR3_Alt 2 NULL GeneID:541068 8 GENE SPIN1 NULL spindlin 1 EMBV3_29568 TCAAGGAGCACTTATTATGAGATAATTGAGGTGTAGCCAAGGAACAGCACTCAGACCCTC Gene BVV0101_020371 + 0 NULL GK000018.2:40745563-40969208 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10516 CCACTACAGTGACCAGGGAACGGACTGGAAACCTTACAGGGAGAAATCCTCAATGGTGGA Gene GeneID:280687|F5:NM_173879:58_cdna Constitutive 0 NULL GeneID:280687 16 GENE F5 NULL coagulation factor V (proaccelerin, labile factor) EMBV3_12962 GCTGGGGTACCTTCATTTGCGATCTCCAAATTTAAGAGAAGATCGGAGAGCTGTGCTATC Gene GeneID:508133|SDC4:XM_002692330:113_cdna Constitutive 0 NULL GeneID:508133 13 GENE SDC4 NULL syndecan 4 EMBV3_34340 CTTCCCTCCGGTGTAGACGTTGTGTGCCTCTCGTCACTGCTCCTCCTTGTTTTTACTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04170 CCTGTGCTGAAGGGAGTTTACCTCCTCACCACGGTCAGGAGAGCATCCCACAACCCCCTA Gene BVV0102_452868 + 0 NULL GK000015.2:85011314-85016077 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066466 1 XLOC_041179 NonCoding TCONS_00066466 XLOC_041179 NonCoding NonCoding - 15:85013672-85014030 - TSS50209 358 1 0 0.000380046685157005 0 0 0 0 9.99173960790751e-06 0 0 0 0 0 0 0 0 0 0.000221326129942961 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding GCCAAAAAGAAACAAAAAGAGACGATCCCGTTTCGTGGTTCATCACCAATTTCCTGAAAACCAGCCCTGGCCTTCTGGCCAAGACAGTTGTCCAGCCAGGCGAGCTGACCCAGCGTCCAGGGTTGGTCCCGTGAGCGAGGCCACGGTGCCCGGCGCAAATTCACCCACTCAGCTGGTCACTGTTACCCCCGTGGTTCCCGGGCCCTGCAAGGCGGCTCAGGGCTCTGGGTAGGGGGTTGTGGGATGCTCTCCTGACCATGGTGAGGAGGTAAACTCCCTTCAGCACAGGCGGCGATGCTGCTTGGCACTCTGGGTCGCTGCGCTGAGGCCACGGCCCCCCCCCCATACCCAGGAGCGG TCONS_00060428 . 3' 1914 TCONS_00060428 . 3' 2271 EMBV3_01501 TCCTTGAGGAGTTGACCCTTAGGCAGAGAGGCCTGAAGAATGAGAAATCAGCTGAGGAGA Gene BVT0102_447748 + 0 NULL GK000025.2:1538059-1540862 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147611 1 XLOC_089498 NonCoding TCONS_00147611 XLOC_089498 NonCoding NonCoding - 25:1538308-1539887 - TSS110146 1579 2 TCONS_00147611_1 201 1 0 0 0 1.75820171329576e-05 0 0 0 0 1.24862088546928e-06 0 2.6057591319386e-06 0 2.71743156254345e-05 0 0 0 0.000117087621975007 0 9.53424452439149e-05 0.000485932978916701 0 1.92256766684103e-06 1.87984122838548e-05 0.000290502082185273 0.000297282806523282 0 0.000187403293295552 2.59747411953434e-05 2.43322793510073e-05 6.45640645184091e-05 0 XM_594385.6 LOC516233 PREDICTED: Bos taurus uncharacterized LOC516233 (LOC516233), mRNA. 1e-34 152 98.85 0.0544648511716276 0 noncoding 0 0 0 0 -0.0248774567424589 0.853027639239761 0.00335977689453014 0.941780344009696 GACGGTGGAGGGGCTCCTGCCAGAGTGTGAGCGTGGGGGGAGGAGGGGAAGGCAGGGCCATTAGAGCACCAGCAGGCTGCCCCTCCTAGCTCGCCACGCCCTGCTGGTGCCCAGGCTGGGCAGAGCCGCCCAGTGGCCCGGTGTGCCCCTGGCTCTGTCCCTGAGCTGACTGCAGTCGTCACCAGGAAAATATTAAAGGCTCTAAGTGCTTTGTTTGGCTTAATCCTCACATTGGAGGAAAGGTCTCTTAATGTCCCCAAATGGCAGAGGAGGAAATTTGTGTTAATCAGATATTGTCAGGGTTTCTTCATCATCTGGGGAGAGGCAGACCTCACAGGCTCACCCCACAGGTCCCACTGTGGTGGAGGGGCTTGCAGCAGGATGAAGAGGGTTCATCTGTAGTCACTAGCATTGGGAATGGCGAGGTGGAATTGGGAATGACTAGGACTGTTCCAAGAATCACCTCTGAATTCATGATTTATCAGTGTGCTGCAGACAGAACCTCTGAGGTCAGGAGTGACCCTCCCCCAACTAGCTGGGGCGGTGAAGGGAAGGCCCTAGAATCCCCAGACAGACGCTGCGCCCAGGGGCCCATATCTCAGGACCACCGCCTTACAGGGGAGACGAGAGCCCATCCAAACCTGGCGCATGGGGGTTCTTCCCCAGCCCACAGCTCTGAGAGCTGGGAGGGGCGGCCAGCCTGCGGCACTCTGATGGCCCTTCCCCTCCTCCCTCAATCACACTCTGGCCGGAGGGCCTCAGTCCCAGCCCCTCCACCCAAGCCCTGGAGGGAGGGAAGGGTCAGGAAGCCACCCAGGCCTGACAAAAGGCCTTTGTGCATCTGTCCTGCCAGAGGCACTCTCTGAAGCCTTCAAACCTCCCCTGGTCTTGGCCCAGGCAATGAACACCTGTGGACACAGGCCTAATTTTTACAAAGTGCCTTCAGTCCAGCTGTCGTAATTCTTGCCAATCTCAGTGGGGGTCGCTGGCCTGGTAGGGTACAAAGTGGGATGGCTCCTGCTCCCTTGGAAGACAGAGATGTTGAAGAAGGGCCAGTCTGCTCACAGCCAGGGACCTAGAAGGATGCTGCGGCCCCTCCCTACACTGCTGACAGTCCCATGTTCCCCACCCCCAGCAACCGAGATCCTCTCAACACTCTCCACATCCCCTCCCTCACTTCTCACCTGGACCACTACAACAGCTCCATGCTCCCCCCACAAAGCCTGTGGTCCTCTCTTGCTGCCGTGAAATACACTCTCCAGAGGAATCTATGCAAAACCGAAATGGGATCAAACTTCCCAGCACCGTCCCAGGGTCCTGAGCATACATCCCCAGCTCCTGGGTCAGTTGATGGTATCCTCAGTGGGCCCCTGGCCACCTCAGGACCTCTGCCCACACCACCCTTCCCAGGTCCTGTCCCACACTGGCCTTTCTGCCCAAGCAGGAAGTCAAGCTCCTCCTCCCTCCTCCGTTGGCTCTGCCTATTCTCCTCAGCTGATTTCTCATTCTTCAGGCCTCTCTGCCTAAGGGTCAACTCCTCAAGGAGGCCTCCTAGATTTAACACACCCTGTTCATAGCT TCONS_00145877 . 5' 251 TCONS_00145877 . 5' 251 EMBV3_10608 GAAGAAGTTGAAGCTGACAGAAATATTAACCGTCTCCCCAGCCTTGTCCTTTCTGATACC Gene GeneID:615668|CCDC117:NM_001105634:98_cdna UTR3_Alt 2 NULL GeneID:615668 17 GENE CCDC117 MGC166149 coiled-coil domain containing 117 EMBV3_21862 GGAGACTGTGCTCTTTTCCTCTGCCCACCTGAGAATCACAAATACAAAATGCCGAGACCG Gene GeneID:540493|COPS8:NM_001083497:8_cdna Constitutive 0 NULL GeneID:540493 3 GENE COPS8 MGC143355 COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) EMBV3_08591 CAGCTTGGGAACCTGGGGATCTGGGAAGCAGAGAACCAAATATTCTTTATCCCTTGTGCC Gene BVV0102_114577 + 1 EMBV3_28092 GK000017.2:58418689-58438109 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12432 GACAAAGAGTTCTACAGACCCACCCCCAGCCCCAACCCCAAGCTAGAAGATGGATACCCT Gene GeneID:616833|TSC21:NM_001099160:146_cdna Constitutive 0 NULL GeneID:616833 11 GENE TSC21 MGC152332 protein TSC21 EMBV3_35201 GATTGATGAACATTTTGTGGCAGATTCAAGAGCCTTGTCCAGCAGAAGCCTACTGCCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33767 TACCTAGTGGGTGCCTGCTTTCTTCTTGCTGTTTTGGGACTAGGCTTCTGCTCTTCCCCA Gene GeneID:514695|NECAB3:NM_001081589:1072_cdna Constitutive 0 NULL GeneID:514695 13 GENE NECAB3 MGC148647 N-terminal EF-hand calcium binding protein 3 EMBV3_17651 ACACAGAGACCAAACTGAGGCCCTGGCCCACCCCTCCTTTTGTCCCCAGCTCAGAATAAA Gene GeneID:526884|WDR6:NM_001105623:214_cdna Constitutive 0 NULL GeneID:526884 22 GENE WDR6 MGC166101 WD repeat domain 6 EMBV3_22149 AATGGCTCAGCAAAATACAAAATACAGGAAGAAAAACAACATTGGAATCTCAATGGAGCC Gene BVV0102_067876 + 0 NULL GK000018.2:45067603-45073964 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41782 TTTCAAAGGCTCTGACCTCCCTGAGCTCTTCAGCAAACTGGGCCTGGGCAAATACACAGA Gene GeneID:537799|BICC1:XM_002698825:57_cdna UTR3_Alt 2 NULL GeneID:537799 28 GENE BICC1 NULL bicaudal C homolog 1 (Drosophila) EMBV3_38655 ACGGGCCCTGGAGTGTACAAAAGAGTTTAGGATCTTCTCTGAGGTGGTGGAGGATGCTGA Gene GeneID:516783|SDSL:NM_001098995:177_cdna Constitutive 0 NULL GeneID:516783 17 GENE SDSL MGC159817 serine dehydratase-like EMBV3_33342 GGAACCACTCAAGGCAGAAGAATGGCCTTGGAACCTGAAGAACAGACAAATCCAGGACAG Gene GeneID:782831|FSTL5:XM_002694412:10_cdna Constitutive 0 NULL GeneID:782831 17 GENE FSTL5 NULL follistatin-like 5 EMBV3_00687 CGAGGGTGTTTCAACCTACAAACTCCTTTGGAAGTCCCCTAGCCTGCCTGAACAGGTTCT Gene BVV0102_290167 + 0 NULL GK000024.2:4197666-4231232 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141021 1 XLOC_085449 NonCoding TCONS_00141021 XLOC_085449 NonCoding NonCoding - 24:4225650-4228960 - TSS105232 3310 4 TCONS_00141021_3 73 0.675226586102719 1 0 0 0 0 7.52642424863255e-06 0 0 0 0 4.76745891339025e-06 1.892891779147e-05 7.68439266218967e-07 3.63089825866655e-06 2.70891469713427e-06 0.000182538568413939 3.40913983783256e-05 0.000552790480682056 0.000637005945007462 0.000318374114890479 6.49933925896271e-06 0 0 0.000164779215478224 0.000121415751360163 0.000605248683022363 0 3.04076659792783e-07 0 4.71553234511639e-05 2.069605416298e-05 3.26674928965112e-06 XM_002697329.2 BOLA PREDICTED: Bos taurus non-classical MHC class I antigen (BOLA), 1e-150 538 79.32 0.180060422960725 0 noncoding ACCCACTCCATTATGCTTGCCTGGGAAATTCCTTAGACAGAGGAACCTAACTGGTTGCAGGCCATGGGGTCACGAAAGAGTTGGACACCACTTAGCGACCAAACAACAATGTATATGTAATAAAGCCCCTTTGGAGCTTCTTTAAGAGATGTTTGTTAAAGGGGATGTCCTTCCATGGCTCCTGGCCTCCATTTTTTCCTGATGGGCAGAGGTCATTCAGATCTTTTCTCCCTTTTATATTTCCCTATATGTAATTTGTCATTTTTCTCAGGCTACTTTCAAAATTTTCTCTGTATTTTTGGCTTTCAGCAGTCTTGATTATGCTGTGCCTTGATATGGTTTTCTTCATAGTTATCCTGTTTGGAGTTTTCTGAGCTTGTAAATTTATGTATTTCAGCAAGTTTGGAAAATATGAAACAATCATTTCTCGAAGTACTTTTTCCCATTCTCTTTCTCTTGAATTCCAGTTAAAGGGTCAACCCTTTCCAGGATTGAACTGGGGTCTCCTGCATTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCCCAGACATACATGACACCTGTTGATATTATGCGTGACTCACTGAGACTCGGTCCTCTTGTCTTCATCCTTTTTTTTCCCCACTGAGAACTTGAGCTTGGATCATTTTCATCAGTCTGTCCTCTATTCACTGATTCTTCTGTCATCTCCTGTCATCTGTTAGAAACAGCTAGTGATTTTGTTTCCTTAATTCAGATATTGTATCTTCTAGTTCTGAAATTTCTAGTTCTGTCTATTCTACTTCTAAAAATAAAAATGTCTATTTCTCTACTGAGATTTCTTATTTGTTGACTTATTAAAGACATATTTTCCACTAGCTGCTTTGATATTTCATCTTACTCCCAACACTGAAATCATCTTCAGATTAACCATTAATTTGCTCTTTTCTCTTGATTATGAGTCCTGTTTTCCTTTAAGTGTCCAGTAATTTTGGTTGTATCCTAGATATTTGAGTAATGTGGAGCCTCTGAATTCACATGGTCTTCTGCAGAGGTTGTTGTTACTGTTTTAACCAGCAGTTATTTTGGCTGTACTCACACTCTGTCTGTCATGATAGCAGTGAAATCACATTCACTTCCCTCGACCTTAGCCGGCAGGATTTAGCCTGCCTCACACATACACAGTCCAAAGGTCACCCAGAGACTCAGGCAGACTGTGTGGAACGTGGGGCTGAAACTCCTCCGCTCACCCTGCACTGATGTCATAACCCTGGGGTTGGCCTTCTGGCTCCTCAGGTGTGGTTTTAAATAAAATTTAGATAACTGCCTTTATCAAGTTATAATTATTTATTTAAGTTTGAAAGGAAGCATTGGTGACTTCCCTGGTGGTCCAGTGGTTAAGAAGCGTTTGTGGGTTTCATCCCGGGTCTGTGAGCTAGGATTCCACATGCTGCAGAGCAACTAAGCTGACACGCGCACCCACGACTAGAGAGCCCGCGTGCCGCAGCTAACGAATCCGGACACTGCTCAGAAGATCCCCTGTGGCCGCTAGGACCCGATACAGCCAGAGAAGTAAATAGAAATGCAACCAAAAAGAAGCATTGGTCATTTTTGGTGATTAACCATTCTTGATGACTAATTTACTTTTAACAGTGTCATTTAAAGTTCTTATTTCCTTTAAGTTAACACCTTCTGCCATTACATTCACATGGCATACAATAACAGTGCAAGTGTGCTGTCAACACTTAACCACACTAGAATTTTAAAGTTAAGTTCTCCTTGAATGTGTTTTGGTGAAGTTCAGTGTGGATGGTGAGATGATGTAAAACTTGATATTTTCTGTTACAGTCAAAGGCATAATTTCTCTGACATCTTCATTCTCAATAAGAAATTACACTAGAATGTTTTTAAGTAAAACTTTTCCACATAATGACAATTTTTTTCCTTGTTCAGTTTACCTAATTGAAAAAAGCTCAAGCATTTATTTACTTATCATAACTGTTAAGAAATTATAGTCATTACACCTACCATCCGTTCTCCACATGACGCTGGAAAGAACAAGACTACATTACTTTGCTTCAGAAAATCTGTATTTCTGTCTGTACTTCACTGATTGATTGAGCCCTTGGACCGCCCCACAAAGAAGAGAATATACCCAACACAGCCCTCTGCCTCCCCAGGCTTGCTTCGTAAAGAGGAAAACTGATTCAATCCATTAAGAGGGAGGTTATCTTTCTTAAGTGGCCTACGTCTAAGGTGCAGATATTACAGGGTTGGTCAGTGGAAGAACAGGAATATACGCACAAGTATTAGGACTTAGGTTTCAGTGCTTGTCATGAATGGCAGTGGTATTATGAACAGGTAAACGATTATGCTAGATTTAACCATAGAGTACATTATCACAGAAACAAGTATTCCAGGAACTCCGCCCATGGCAAAGGTCTTGAGGAAGGAGGCTGCATATGCAAAGGCGGGATCGAGTCCCTCAGGAGTCCCCCTGGAAATTCTCGAGCACCTACCCTCAAAACCAGAGTCTGCCTACTTTACTGCTTTGTGCTCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTCTCTGAAAAAGAGTTAACTTACAGCTCCAGTTAATAAAGTTCCTGGGTGTGCCAAGGGTGTTTCAACCTACAAACTCCTTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTCTTCTGGCCACATGTGATTGTTCAGAGCCTCCCAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTTAAAAGATTGATTAGAAATTGTATTGGTGAAGGGTTTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTACTGTGTCCCTGGCAGTGTATTGGTTAATATAATTGGTGCATAGGAATGTAAGTAGTAGCTTTAATGTTTGTAACCTTGGACCCTTGAGTTAATTCTTTTTCTTGTTATAGCCCAACACACCTTTGCCCTATAGGAATGCAACTTAATCTAATGCTTTAGGGTGGCGCCTGACTTTAGAATAATCACCTTTAGAGAAAAATAAGTTTTCTGAAGAAAGGATCTTAAAATGTTAACAGGCCTCCGGGCCAGAAGATGATGTAAATCACCTAAACTTTTGCATATGACAAGTTTGCAGGAAGAAAACCTGGCTTACTGCTGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGATATAAATACTACTTTGGAAAAAAAAAAAAGTGTGGGCATTGTTCACCGAAGCTTGGTCTCCCCATGTAGT TCONS_00139682 TCONS_00139683 . 5' 1410 TCONS_00139682 TCONS_00139683 . 5' 1410 EMBV3_16088 GTTCTGGACTTGGTGCTTCATTCTGCTATATGCTCTCCTATTTAGTTGGGAGGCCAGTTG Gene GeneID:616372|TMEM41B:NM_001099156:237_cdna UTR3_Alt 3 NULL GeneID:616372 15 GENE TMEM41B MGC143027 transmembrane protein 41B EMBV3_34350 AAGGAGGCTTCCTCGCCCACCCCGCCCCTCACCAGAGCTGCCCTATGGATGGAATAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04321 TAAATGTTTTCCTGTGAAGCCACGTCAGTGTCTCCCTTGGCTGTGCTCGAGGGGGATGTT Gene BVT0102_114003 - 0 NULL GK000010.2:101224039-101236739 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023527 1 XLOC_014194 NonCoding TCONS_00023527 XLOC_014194 NonCoding NonCoding - 10:101229491-101232228 - TSS17417 2737 2 TCONS_00023527_3 96 0.176835951772013 1 0 4.97102232072813e-06 4.58916634546882e-07 0 0 0 0 1.2784216909956e-05 2.80932739978147e-05 0 4.81051851894615e-05 2.09096266295383e-05 5.87892874594639e-05 7.12865040419847e-05 1.20306903025309e-05 0 0.000598289733597211 0.000527731204292055 0.000632542380407577 0 0 0 0.00031450379102374 0.000345240833555418 0.000232757124004947 0 1.28707920599186e-06 0 0.000101772081165736 6.56266764666249e-05 0.000118619887299299 XR_227531.1 LOC100335465 PREDICTED: Bos taurus uncharacterized LOC100335465 (LOC100335465), 2e-104 385 89.15 0.107051516258677 0 noncoding GACATGGGATATACTTCCAGAATCTGGATTTCAACACATTTTCAATGTTGCTGTTGCTGATCCAAAAACAAGCCCGTTAATAAGTGAAGTGGACATTCAGCTAATGACACATCGCACTACCTTGTCAATCCTAATGGGAATCAGCCCTGAATGTTCACTGGAAGGGCTGACGCTGAAGCTGAGGCTCCAGTGCTTTAGCCACCTGATGTGAAGAGCTGACTCATTGGAAAAGACCCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAAGAGACGACAGAGGATGAGATGGCTGGATGGCATCACCCACTCGATGGACGTGAGTTTGAGTGAACTCTGGGAGTTGGTGATGGACAGGGAGCCTGGCGTGCTGCGATTCATGGGGTCACAAAGAGTCGGACACGACTGAGCAACTGAACAACAAAATAAGTGAAGTGGACACTCAACTAACAACAAGTTGCACTACAGGCATGATTGTGTGAGGAGCTCTGCCAACCTGCAGGGAAGTACATAAATATTTATTCTTCAAATATATTAATTGTTCCACGAATGTGCTGATTAACAAAGTTGGCTATTTTGACGAGGCATTCTAACTCATAAGTGATTGATGATGGTGGAAATGTGTGATGCCTGTAAACGACTAAAAGAAACATCTATTGTCTGGCACATAATTTAAAATAACCCATTGGAGAACTGGGACTAATTACATACCTTTGCAATAAGAACTAAAATGAAAAAAAAATAGACAAAACAGCTGTAATTGTACTATTCACACACAAATAATATCTTGCTACAATATTTATTTTATGGCAAAAAATAGACTATAATATATTCACTTCACATATATCACATTCATTCAAACTCTTTTGCCTATTAAATGTACACACTTTTACAAACCAATGGCAGCTCAGATTTAAGCTCTTCTGATTATACATTATATACTGTTTTTACATTGTTGATCACCAGACAGTACCACATAAAATTGCTTTTTAAACTAGAAAATACGCAACAACTACATATACCATGTGATTTTGAAAAGGCAGAATTCCCAATGCATTGCTTGAATTATAGGGAACTTTCTGAGAAAATGTATTTCATAAAAATTGTCTCTAAATATTTAAGTTTCTGCGGACATTTGAGTCATATTAACAGCAGCTGGAATTTTTAAATACATTATTATCCAGATATTCATTTTTAAACTATGCTTTGCTTAATTTGCTATGGGTGGGGTTTGGACTGCTTCAGTTTGTAACAAAGAAATATACAACAACATCCTGTCTCGTTGCAGCAATCTTCACCTGAACCAAGTAGGACTGTTGGAACATCCCCCTCGAGCACAGCCGAGGGAGACACTGACGTGGCTTCACAGGAAAACATTTAATGTCCGCGTGATAAAAGCTGTTTTATATTTTAATGTAAAAAATTACTTGAGAATACAGTAAAAAGCAGCAAATATATTCTAAAGGCCCAGTGCCAACCTTCGGAGTAAGGTTTAACTGTTCAAGTTTTTTAAGGCTTAATACTTTAAAAAATATTTTTATTTTCTCCCCTCATTTTCAATGTGTTTAGAAATTGAATACACTGATAACTGTGTAATAGCTCAATTCTACAATAAGAAATTAAGCTGCTTACTTTTAATACAGAATTGAAAAAAAATCTAATATGGAGAGCCTAAACGCACACTAACAGAAAAATCTTCAAAAACGTTAAGAATCATCTCTGTACAACTACTTCTACTTCTCTATTGAGCCACAAAACCAAACTATGCAAATAAAACCCACCAAAGCACTACTAATCTACAAGTTTCACAAGTTATAGCATTTTTTTCCTTGTTTTTTCTTTCACCTTTTTGTTTTGTGGGCTTAAGATTTTGGTTTCTTTTTAATATCGTTTTTATTAAGCCTGTTCTGAAAATGTTCGTCACCTGTAGAGAACATTTACTTTTTTTCAGGCATTTGTTAGGCTAACAGCACAGTGCGTGCGTGTCCAGTGGTGTCCGATTCTCGCGACCACAGGGACTGCAGCCCGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATCCTGGAGTGGGTTGCCATTTCCTTCTCCAGGGAATCCTTCCGAACCCAGGGATGGAACCTGCTCTTTTTCGAATCTCCTGCATTGACAGATGGATTCCACTACCTGGGATTCCTAGACTGGGAAGACTGAACTTAGATTCCAGTCTGGTCCAGACTGAGCCAGTATGGTAATTATTCCAGTAAAAGTACAAGCCCATTAGATCCCTTCAGGACAGTTAATTCTAAGATTAAATCCCTTGTCAATAAATATTTCTCATTCAATGGCCCATTAATTTCATGTGATTTCTAATAAATTTCTAGAAAAAGATGTTTGGAGACTCTCGTAGCATCTATGACAGAGCAGTTGGACCTGTGATATTTGCAACTCTTATGAAAGATGAGTGACCTCGTTTATTTGTTCAGTTCTCCTCAGCTGATAAAGGAGCGTATGGAGATGGAAGGCCATCACCATTACATCAGTCTACCCCAAAACGTGAGGGCCAACAGACACACGTCCGGGATAACCCAGATAATCCAACCGTCTGAACTTCCCTGGTCGGTAAAGACCTGCTCCTGAGAATGAATACATCTTTTCTTCACTAAGCTTTCAGAGCTTGAATTTAAAATACACATGAGCACTCAAAATGTTGGTGGTGACAACCGAAATAAAGGACTGGGCTTTATATAGTTTT TCONS_00018513 TCONS_00018507 TCONS_00018508 TCONS_00018509 TCONS_00018510 TCONS_00018511 TCONS_00018512 TCONS_00018514 TCONS_00018515 . 3' 3101 TCONS_00018513 TCONS_00018507 TCONS_00018508 TCONS_00018509 TCONS_00018510 TCONS_00018511 TCONS_00018512 TCONS_00018514 TCONS_00018515 . 3' 5837 EMBV3_28522 TAGCCCACGCGGCCTTTTCCGCTGCGCAGCATCGTTCTTATATGCGATTAACAGAAAAGG Variant GeneID:617557|MMGT1:NM_001079630:33_cdna 380^481 2 EMBV3_00294 GeneID:617557 X GENE MMGT1 TMEM32 membrane magnesium transporter 1 EMBV3_11851 CGGTGCGTGACGGGCGAGGGGGCGGCCGCCTTCCGCCTGGGCGGGATTCTGACTTAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20271 GGGAGCAACGCTGAACACCAGGCCTCTGGGAGAGATTTCACTTTCACTTCAGACTTGGAA Gene GeneID:506181|LOC506181:XM_002688947:41_cdna Constitutive 0 NULL GeneID:506181 7 GENE LOC506181 NULL similar to zinc finger protein 77 (pT1) EMBV3_03162 TGTGCCGTACCAACCTTGTAGTAAAATAGCACCAAGTCCTCTAACCCAAACCCCCATGTG Gene GeneID:613644|CD99L2:NM_001083758:101_cdna Constitutive 0 NULL GeneID:613644 X GENE CD99L2 NULL CD99 molecule-like 2 EMBV3_17208 CCAGCTGTTAATTGGAGGTGTCACTGGATGCTTGCAAACCATACTGGCTACATCAAAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27934 TCCTTATAGATCGAGACTTCTTGTGCGGCTATTCTGGAGAAGTTAGTGAGTGCCACGCGG Gene GeneID:777599|MS4A5:NM_001078146:33_cdna Constitutive 0 NULL GeneID:777599 15 GENE MS4A5 MGC137357 membrane-spanning 4-domains, subfamily A, member 5 EMBV3_31648 AGCTGGGCCACCCACTCTACTTCTGGTTTTACTTTGTTTTCTTGAACTCCCTGTGGCTGG Gene GeneID:515569|EBP:NM_001034500:66_cdna Constitutive 0 NULL GeneID:515569 X GENE EBP MGC128402 emopamil binding protein (sterol isomerase) EMBV3_16018 GGACTGTATGCATATTGAGAAAACTTTAAAGATTCAAGTTTGTAATCTATCCGAGCTCTG Gene GeneID:506056|EID1:NM_001098377:35_cdna Constitutive 1 NULL GeneID:506056 10 GENE EID1 NULL EP300 interacting inhibitor of differentiation 1 EMBV3_16093 CCCCACTGTCTCCTGGACTCGCCCAATGCAAAATCAGATCCTGAGCATTTGTAGCAAAAC Gene BVV0102_041933 + 0 NULL GK000005.2:64674629-64763618 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10317 AAAGTTGGGCAAAGTGGGAGGTATTAGGACAGGGAGGACTGTGACCAGACCCAAAGCCTA Gene GeneID:516280|RIC3:XM_002693062:368_cdna UTR3_Alt 2 NULL GeneID:516280 15 GENE RIC3 NULL resistance to inhibitors of cholinesterase 3 homolog (C. elegans) EMBV3_25991 TCTTGAGTAACTTCTTCCGCTTGCCTTCCTCACCAAAACTGGGGTGGTTCTAAACAATCC Gene GeneID:529109|LOC529109:XR_084733:144_cdna Constitutive 0 NULL GeneID:529109 X PSEUDO LOC529109 NULL similar to Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (CRSP complex subunit 2) (Cofactor required for Sp1 transcriptional activation subunit 2) (Transcriptional coactivator CRSP150) (Vitamin D3 receptor-int EMBV3_36363 TTCAGAAGGAAAAGTCCAGACAAGTGCTGCTGGAAGGACAGGTGAATGGGCACCTACAGG Gene GeneID:539819|TEX28:XM_002699726:146_cdna Constitutive 0 NULL GeneID:539819 X GENE TEX28 NULL testis expressed 28 EMBV3_38154 TCATCATCGACATGAATCTCACCTTCCTAATCACCGCCGTTTGGGGAATGGGTCACAGCA Gene GeneID:784292|DCTD:NM_001101292:85_cdna Constitutive 0 NULL GeneID:784292 27 GENE DCTD NULL dCMP deaminase EMBV3_38536 TACTATTACTTTAGGATTGTTTAGTCATCTGTTGCAAAGCTGACGGTATTGTCAAGCAAG Gene GeneID:535625|MAPKAPK5:XM_002694521:440_cdna Constitutive 0 NULL GeneID:535625 17 GENE MAPKAPK5 NULL mitogen-activated protein kinase-activated protein kinase 5 EMBV3_10910 TTGCCTGAGTTCACCCCTGGCCCGTGTGCACCATTTATGCTCTTAGCAAGGCTTATTGCT Gene BVT0102_055838 + 0 NULL GK000016.2:81421641-81471373 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07940 ATCTAAGCACAGAGTTCTGCTACCAAGGGAGGATGGGGACTTTCTCCTTGGGGGTCATAA Gene BVV0102_407427 + 0 NULL GK000001.2:34707257-34969557 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12136 GGAACTCAGGGAAAGTCATGGAAGCTGGAGTCTTACCTACCAGAAAGAGGGGACCAAAGG Gene BVV0102_056468 + 0 NULL GK000029.2:3812175-4826047 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06334 ATGGACCGCTCGACGGACATTGTGAAAGCCATCGCCCGCCTCATCGAGTTCTACAAGCAT Gene GeneID:287014|NDUFV1:NM_174808:479_cdna Constitutive 0 NULL GeneID:287014 29 GENE NDUFV1 MGC139751 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa EMBV3_22043 CATGATATTGATTGTCTTGGCAACCCACTTCAGCAAGGAATTTACCCCGCAGATGCAGGC Gene GeneID:513108|HBE4:NM_001014910:347_cdna Constitutive 0 NULL GeneID:513108 15 GENE HBE4 NULL hemoglobin, beta, epsilon 4 EMBV3_37017 TAGACCCTGTGACCTACTGTCAACCCACCAGAGACTATTTCCCAGAAAAACCAGTACCCC Gene GeneID:504576|ZMAT1:XM_002699829:96_cdna Constitutive 0 NULL GeneID:504576 X GENE ZMAT1 NULL zinc finger, matrin type 1 EMBV3_06273 GGCACTGTTCCAAAGCACTGGCAAAATGAGGAAAGCATCAGAAAAAGAAAACCCTGTGGC Gene BVT0102_086898 + 0 NULL GK000011.2:98971731-98979289 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026144 TCONS_00026145 TCONS_00029085 TCONS_00026143 TCONS_00026146 TCONS_00029084 TCONS_00029083 2 XLOC_014935 XLOC_015658 Coding TCONS_00029085 XLOC_015658 NonCoding NonCoding URM1 11:98975135-98979324 x TSS20298 2979 5 TCONS_00029085_3 76 0.45652903658946 3 0.289398280802292 5.55838916432408e-05 0.000507267392368411 0.000419363605701135 0.000351231506699293 0.000194428075487139 2.36328823477863e-05 6.47220239864861e-05 0.000119126982256532 4.13699092951439e-73 0 6.56234529165192e-05 0 7.35221212788525e-05 0.000113690855773165 4.57855200420248e-05 1.45393444003142e-70 0.000843796746134936 1.99958654800896e-314 0.000209708582321103 6.89366223620821e-05 9.1707281708492e-06 0 1.81356408319329e-106 3.75004921863678e-05 0.000378586375577498 0.000193416720900063 0.000174521184926553 6.97702159516975e-05 8.3720221813416e-193 2.75681437336254e-246 NM_001191120.1 LOC781062 Bos taurus ubiquitin related modifier 1-like (LOC781062), mRNA. 0.0 1579 100.00 0.293387042631756 0 noncoding 0 0 1 1 -0.270170356085956 0.145784596474527 -0.0133530096878895 0.859248694456276 ACCTCCACTGACAAGGGCGCTGCCATGTTGAGGAAGCCGAGCTCACAGGAAACTCCCCTGAACTTCCGGCTCTACTGCCCCCCCCCCGTTTCCGGTTGCCGCGGACGGAAGAGGCGGGGCCGAGGAAACTCTCCTTCTCAGCTATTGGAGGAAGATTTGGAGCCGGAAGCTGAGGCCGGAGGGCCGTAGGCCCTGTTAAGGGGCGTTTTGGTTGGTCATCCTGTTTCTTTTCGGGACGGCGCTCAAACAGCTAGGGCCGGAAGCGACTGACATCAGCCACAACTCGGCGGAGGAGAGACCTGGCATCTTTGCGCTGTGACCGTGAGCTACGTTCCGGTTTATCTTGCATTAGTTACCAAATTACCTTCTGTCAGCACACCGCTTGGACGAACCCGTCCACTTGACTTGAATTATCAGTGGCATCCAAATAAGCTCTCTCTTGAGCCATCGACTCGCTATCCAACCCCCCTTTCGCCGTCGATTTAGATTTCATTCATTCAGCAGATGTTTATTGCACGTCCTCCGTGTACCTGACATTTTGGTCGGTGCTAAAAGATGCCGGTGGTGAAAAGGATCGGCAAGGTTCCTGTCTTTAGGGCACTCACAGTCTCGTAGGGGAAACGAATCAAATAAACATACTAATAAGCGTAAAATCTCAAACTGAACAATAATCCGGCATCATAAGAACTTCAGAAAGAAAATGGGCTGCACTGGACTTGGGCTGAGCTCTAAAGCCTGAGTCGAGCTAAGTAGGTGGATATGCGGAGAGAAAATCTGCTAGGAGCATTCCAGCGAGAACGGAAAGTGCAAAGACTCTGGGTAGTAGGACATGCTGGAGCACCAAGAGAAGGTGGAAATTGGGGAGCAGAGGGCCTGATAGGACATGAGGCTAGACATGTAGTCAGGGGCCAAATCATGACTGTGAGCCAGGCAGTTACCACGTTTGGGTTCGTCTACATGCTAAGCTGAGTTTGCAGCCACGTGTTCTTCTACCACCACCATCACCTCTCACCTGCACCTGCTTCTCTGGCCTGCCTGCCTCCCACCTCCCTGCTTCTGATCTGACTTCCTTACACAGTTCAACTCCACAGACAGCTGCGAGTGCCTTCAGTGTATCAGGCACTGTTCCAAAGCACTGGCAAAATGAGGAAAGCATCAGAAAAAGAAAACCCTGTGGCCAATGGGAAGAACCCACCTTCACTGTGCTGTGTGAAACTCAAGTTTCCTGTCTGTAAAGAAGGCTTTGGGACCAAACGATCTCTTAAAGGCCCTTTAAGTAAAAATGTTCTAGGAAATTCACTGATGATCCAGCGGTTAGGACTCAGTACTTTTGCTGCCAAGGGCCTGGGATTCAATTCCTGGTTGGGGAACTAAGGTCATACAAATATATATATGTATAGTAAGTGTTAGTAGCTCAGCTGTGTCTCAGTTGTGACCCCCTGGAATGTAGCCCACCAAGCTCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTCCCTTTTCCAGGGAATCTTCCCTACTCAGGGATTGAACCCTGGTCTCCTGCATTGCAGGCAGATTCTTTACCACTGAGCCACTTCACACACACATACACACACACACATACACATATATATTCTAAGATATTTCATTGGCTCCTCCAAGGGCTGAGGTCTAGAAACCTTGCCTGATTCACCTTAGAGCCTTAGCTCATAGTAAGGAGCTTTATACATTGTAGGGGTTTGGTAAGTGCTTGCTGAATTAATGAATGAAGGAATAAGAGAACACATATCAATTCCCTTCTCAGTCTTTCACTGGCTTCTCTTTCCCAACAAGGTAAAGACCTCTGATTTGATGCCACCTTTAGTTAGGCCTTGTAGAGTTGAGTATTTTCTAACTCTGCAGACTGCTGCCTGCTGAGCTGGCATGGGAGAGCTAAGGAGCTTTTGAAAAGCTTCATTCATTTGACAAACATTCATTGAGCACGTATTAAGTGCCAGGCCCAGGGCTGGTGCTGGGAACACAAGAGCGGACTTTTTTAAAAAAACCAAGGGGTCCCTGCTTTCCTGGGGCTGATATTTTGGAAAAGACACATGTGAAAATGGACCACACAGTGCAATCAGTTGTTATGAAGGGGGAACATGGGACCTGTGGGAGATGAAAGAAGATCCAGTCCAGCCCCAGGGTCAGGCAAGGTTTCCCAAAGGAAGTCACATCTAAGCCCGAGTCCCAGGAAATTATGGGAGGTGGAGGTGGCAGGAGAGGACAGGACAGGGAGGGAGGCCAGAGGTGTTCCTTTTTCCCAGAGAAGTGGAAACCCTTCCCATATCACTTCTAGGTGATTCTTTACTGCTGAGCTCCTGGGGAAGCCTCAACCTCCTGAAGAGAAGTGAAGTGAAAGTTGCTCAGTCGTGTCTTTGCAACCCCATGGATTGTAGCCCGCCAGGCTCCTCCTCTGTCCCTGGGGATTCTCCAGGTAAGAATACTGGAGAATTCGTCTGCAGAGGGTCTTCCCGACCCAGGAATCGAACCGGGGTCTCCTGCACTGCAGGCGGATTCTGCACCAGCTGAGGTACCAGGGAAGCCCCTCTCAACCGCCTAAGCAATAGCAAAAACCATTTTTTAACGTATTCTTTCAATGAGTAATGACCCCCGACTCTGCACCTGCCAGGTGCTTCACACGCATGACCTGCTTGATTCCTCGCAGGGGCTGTTAGCCTCCATTTTCAAATGTAAAAACTGAGGCTTAGAACCGGTGACTCGTTCATGGACCCCCACATGTCAGCCCTTAACCCCAGGCTGTCGTGCCTTCGGGACCCCTGACCCTCACCGCGTCCTGTTGGGCTCAGCTCACCCAAATGCCTTCCTCTGGGACCCAGGCAGAAGAGGGGCGTGGACCCAACTCCTGTCCCTCCAGCAGGCCAGCCAGCCGGGCATTGGGCTGCATCCCTTCCGAAGCTCCGAAGGGAGACAAAGGCGGGGTC TCONS_00026143 TCONS_00026143 TCONS_00026143 r 5' 0 TCONS_00026143 TCONS_00026143 TCONS_00026143 r 5' 0 EMBV3_30886 TGTATAAAAGCCTGAAAGAGGAAGCAAAGGCCATCCTGGAGGGAGAGAAGGTCATCCAGG Gene GeneID:613318|CDCA5:NM_001076270:101_cdna Constitutive 0 NULL GeneID:613318 29 GENE CDCA5 MGC134128 cell division cycle associated 5 EMBV3_15076 TGCCCTGTGAAAAGCTCCAGCATTCTCTGCTATCAAGGTGTGGTCTTAGGAGGATTCACG Gene GeneID:281360|DHRS4:NM_174822:23_cdna Constitutive 0 NULL GeneID:281360 10 GENE DHRS4 MGC137424 NDRD dehydrogenase/reductase (SDR family) member 4 EMBV3_00578 TTTGGAGTTCGTTTCCCTGCCATGTCTGATGCCTACGACCGGGATATGAGGCAGAAAGCT Gene GeneID:790312|LOC790312:XM_002690745:475_cdna Constitutive 0 NULL GeneID:790312 10 GENE LOC790312 NULL similar to Purine nucleoside phosphorylase (Inosine phosphorylase) (PNP) EMBV3_10002 CGATCATCCGAAAACAGCGGGAAGAGGCTGCCAGGAAGAAGGAAGAAGAGAGGAAAGCAA Gene GeneID:100139074|PDAP1:XM_002698216:795_cdna Constitutive 0 NULL GeneID:100139074 25 GENE PDAP1 NULL PDGFA associated protein 1 EMBV3_13891 TACTGTCAGACCTGGTGAATTGCTAGCTGTGATTGGACCTGTGGGAACAGGAAAGTCGTC Gene GeneID:530803|LOC530803:XM_002691937:2_cdna Constitutive 0 NULL GeneID:530803 12 GENE LOC530803 NULL similar to ATP-binding cassette, sub-family C, member 4 EMBV3_41936 GCCCATAACATCCCCAATGCAAATATGAATGAGGACGGTCCCTCCATGGCTGTGAACTTC Gene GeneID:533605|IL17RB:NM_001083467:229_cdna UTR3_Alt 2 NULL GeneID:533605 22 GENE IL17RB MGC148783 interleukin 17 receptor B EMBV3_14447 CCGTTTCACGAGAATCTGAAAGCAGGTGAAATCCCCCAGCCCGACTTTCCAGATGACTAT Gene GeneID:768063|MGC134244:NM_001077120:90_cdna Constitutive 0 NULL GeneID:768063 1 GENE MGC134244 NULL hypothetical protein MGC134244 EMBV3_29268 TTGAATTGGCTAGTGAAGAGTGCTACCTCCATAATCAGAGTGAGACCTGGGTGTGCAGCC Gene BVT0102_122803 + 1 EMBV3_35047 GK000007.2:38795858-38923822 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16827 CATGTGAGATAACTTGGGAATTACCACTGGGGTTTGAACAATGAAGATTAAAAGGCCGGG Gene GeneID:508169|SLC30A5:XM_002696283:33_cdna Constitutive 0 NULL GeneID:508169 20 GENE SLC30A5 NULL solute carrier family 30 (zinc transporter), member 5 EMBV3_36194 ATTCACTATCAGTGGTTCATGCAGAAGTAAGCTTCAGCTGTTACTGTTTTGAAGCCGCTG Gene BVT0102_025525 + 0 NULL GK000003.2:20246078-20253386 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172422 TCONS_00172425 TCONS_00172424 TCONS_00172423 TCONS_00172426 TCONS_00172421 1 XLOC_104129 Coding TCONS_00172426 XLOC_104129 Coding Coding RPRD2 3:20251093-20347195 j TSS128433 9797 1 TCONS_00172426_6 1434 0.00979891803613351 10 0.89815922831188 0.00161545262879764 0.000828438430888522 0.000830372733314251 0.00021386646104032 0.000873510322098079 0.000210641518331132 0.000280423963968263 0.000322536788536972 0.00021848743469167 8.38675379862978e-05 0.000102664566980004 3.18294491102415e-06 0.000183554733503403 0.000352137563036615 8.10960238947318e-05 3.43511610763971e-08 0.000222958515695116 2.95012472653055e-07 0.000433267256467004 0.000290699457292402 0.00012732610825421 0.000332375197067112 3.97982105230968e-05 7.09150784368749e-18 0.00109481641234745 0.000683187914571923 0.00109839373016579 0.000230269477079505 0.000169754552328686 3.64039413155313e-05 XM_005203938.1 RPRD2 PREDICTED: Bos taurus regulation of nuclear pre-mRNA domain containing 2 (RPRD2), transcript variant X4, mRNA. 0.0 1.578e+04 100.00 0.892926406042666 XM_005245031.1 RPRD2 PREDICTED: Homo sapiens regulation of nuclear pre-mRNA domain containing 2 (RPRD2), transcript variant X1, mRNA. 0.0 7676 90.71 0.565070940083699 TCONS_00172426_6 sp|Q5VT52|RPRD2_HUMAN RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 2; 0.0 2457 92.76 0.981171548117155 1 coding 1 1 1 0 0.00275440705017396 0.985657000735232 0.021084280433734 0.712420957739888 TTGATATTTTTATGGTCTCCTGCCAATAAACCCCAGAAGAAAGGGATTTTTGTCTGTTTTGCTGTGTTACCGCCCCACATCTAGAACTGTACTTGACACAAGACACTCAACAACTTTTTGTTGGGTTAACATATATGAAATGTGAGCTTGACGAAACAGGTGAATGTGAGTCTAATGTGGAGACGTGGGAGAATTAAAATACAGTAATTGTATGTGCTTAGTGGAACACAGAAGCCTCCAAATCCATCCAGAAGTTTTACATAGGCAGATGCTATGGCCTGGTTAATTTAGGCTGTGCTAATCAATATAATAGATTTCTAAGGGTTTTGTAAACTATAATGTATTATGCAATTGCGAGACTGTATGATAATTGGCGAAGGTCAATCACATCTTGCCTTTTATTGTTTCCTTGTCTCGAAAATTCTACAGGGAAAATTTTCGTTTCACGTCATTTACTTCCTCTTCCTATAATCCAGTCAAGGGGCTGTGAATGGTATCGTCCAAGGGGAGTGTAAAAAGTTGTTTCGTCTGGGAGTCTGCGTAGTGAATGGCTTGCCGAGGCTGGCGCATGCGCACCTTCGGAGGCACCGCAAGATGGCTGCCATCTACTTTGTCGCGCGTCAGTGTCCCGAGGAGTTAGCAGCGGCGCCGGTAGCGGCAGCTGCAAGTGCCAGAAAATAAGTGGCCGCTGAACGGTGGGAGTTTCTTGGTCCTGTGATGTGAGCTGGACAGCTCCAAAAGAGACACCTCGCTAGGAAGCAAAACGCGGGGTTGGAGCGGTGAAGCCCCTCCCCCCAACCTCTCTTTAGTCCGACCAACTCCCTCGCCTTTCCCTCCCCTTTTTTCCTCCCAACCCGCTACACGCTGGCCTGTCGCGCAGGCGCACAAATCTTCGAAGCGCCTCCTTAGCCCTTGGGGCTTGTGGGCTTCTGCGCGCGCTTCTTCGTCTTCTCCCTTGATTGGCCAGATTGCCCCGCCATGACGTCTCCCTCTGCTTTCTAGGTTGAGAAGGAAGCAGGGGGGCGGGTCCAAGCAGCGCGTGCGCGATACTGTTGCTGTCCCTTTGCTGCTATTGCGTTGCAAAAAAATTCCTGACTAGGTAGCCTTGGGCTTTTCTGTGCTAGAGGACCTAAAGGAGAGAGAAAGATTTCTGCAACTGAAGGGGCAGTCGGGTAGTATTTACTTTAAGATATTAACGCCCACTCTTAGAAGAGTGTTGGGGAAGGGCCTTAAGCGTTGAGAGCCGAAGAGTATAAAACCATTTAATTTCCGGGCCAGACGTTTAGAAAGGTTTTGCAGGAGCTGTTCTCTGCGTAATTCTTCGTGATTGCTGACTGGTTTAAACACAATCCCTTGAACAATTCTGATAAACCTTCGAAACCCGCAGCCCCTCCTTGCAGCGTGTAGGAGCCGCCAGCGTGCCCAGCACCTGGTCCTCCCGTCCTCCCTCCAGAAGAGCCTAGCGCGTGCACCATCCCCACCCCCTGGCCTCCCTCCCCACCTGCGGCTTTCACGCACTCGCAGTGATTGTTTTGCCCGCTCCCGCCGCCGTCGCCGTCGCCGCCGCGGCCGCCAGAGGAGCAGCAGCGCTTGTGCAAACCGGGAAGATGGCGGCCGGCGGCGGCGGAGGCGGCAGTAAGGCCTCCTCCTCGTCGGCCTCTTCAGCAGGGGCTCTGGAGTCCTCGTTGGATCGAAAATTCCAGTCGGTAACTAACACCATGGAATCTATTCAAGGCTTGTCGTCTTGGTGTATAGAGAACAAGAAACACCACACTACTATCGTCTACCATTGGATGAAGTGGCTACGGAGATCTGCCTATCCCCACCGTTTGAATCTCTTTTACCTTGCCAATGATGTCATACAGAACTGTAAAAGGAAAAACGCGATCATATTCCGCGAATCATTTGCTGATGTACTTCCTGAAGCAGCTGCTCTAGTGAAGGATCCATCTGTCTCTAAATCTATAGAACGAATCTTTAAAATCTGGGAAGATAGAAATGTATACCCAGAAGAAATGATTATGGCATTAAGAGAAGCTTTGACATCCACGAATCCAAAAGCTGCTCTCAAGTCTAAGATAGTTGCTGAATTTCGATCTCAGGCCCTCATTGAAGAGCTGTTGCTGTACAAGCGCTCAGAAGATCAGATAGAACTGAAAGAAAAACAGCTGTCAACCATGAGGGTGGATGTGTGCAGCACAGAAACTCTCAAGTGCTTAAAAGATAAGACAGGTGGGAAGAAGTTCTCCAAAGAATTTGAAGAGGCAAGTGCCAAGCTGGAGGAATTTGTGAATGGATTGGATAAGCAGGTGAAAAATGGGCCCTCGTTAACAGAAGCACTGGAAAATGCTGGAATTTTCTATGAAGCACAGTACAAAGAAGTAAAAGTGGTGGCCAATGCATATAAAACCTTTGCTAATCGAGTGAACAATTTAAAGAAAAAGCTGGATCAGTTGAAGTCAACCCTTCCTGATCCTGAGGAATCACCAGTCCCTTCCCCAAGCGTGGATGCTCCCTCCCCGACTGGCTCTGAGTCCCCTTTCCAAGGAATGGGAGGTGAGGAGTCCCAGTCACCAAATGCAGAGAGTGAGAAATCTGCCACACCTGAGCCTGCGACAGATAATCGTGACGTGGAAGATATGGACCTCTCAGATGTGGAAGACGATGGGTCAAAAATTATTGTAGAGGACAGGAAGGAAAAACCTGTGGAGAAGTCAACTGTATCCACTGCTGTACCTACAAAGCCAACAGAAAGTATCTCAAAAGCCTCTTCGTGTACTCCAGCACCTGTGACCATGACAGCAACGCCACCTCTTCCGAAGCCTGTGAACACATCCCTTCTCTCCCCTACTCCAGCATTGGCTTTGCCAAACCTAGCTAATGTGGATCTGGCAAAGATCAGTTCCATCCTTAGCAGCCTGACATCAGTCATGAAAAATACTGGGGTCAGTCCTGCATCAAGACCTTCTCCAGGAACTCCTACAAGCCCGAGCAGCCTCACCAGTGGCCTGAAAACACCTGCACCTGCCACAACAACATCTCACAACCCTCTGGCAAATATCCTCTCGAAGGTGGAGATCACCCCAGAGAGCATTTTGTCTGCTCTTTCCAAAACCCAGACACAGTCAGCCCCTGCACTGCAAGGCCTGTCATCTTTACTTCAGAGTGTTACTGGGAACCCAGTTCCATCCAGCGAAGCTACACCCCAGAGCACTTCAGCTTCCCCTGCTAACACCACAGTCTCTAGCATAAAAGGAAGAAACCTGCCCTCCAATACCCAGTCCTTTATTCCCAAAAGCTTCAACTACTCTCCTAATTCCTCAACTTCTGAAGTCTCGTCAACTTCAGCCAGCAAGGCCTCCATTGGGCAAAGCCCAGGGCTCCCAAGCACTACTTTCAAGCTGCCCTCCAACACTTTGGGGTTCACAGGTAACCACAGTGCTAGCCCTGCTGCACCGCCTACTGAAGTTGCCATGTGCCAATCCTCAGAGGCCTCCAAGCCAAAGCTGGAGTCAGAGTCCACCTCCCCAAGCCTGGAAATGAAGATCCACAACTTCTTAAAAGGTAATCCTGGTTTCAGTGGCTTAAACTTAAACATCCCAATCCTGAGCAGTTTGGGATCCAGTGCTCCAGCAGAAAGCCATCCATCAGACTTCCAGCGTGGCCCTACTAGCACGTCAGTTGACAACATTGATGGAACCCCGGTACGGGATGAACGGAGTGGGACACCCACTCAGGATGAGATGATGGACAAGCCCACGTCCAGCAGTGTGGATACCATGTCCCTGCTTTCTAAGATCATTAGCCCTGGGTCCTCAACACCCAGCAGTACAAGATCACCACCCCCTGGGAGAGAGGAAAGCTTCCCCCGAGAGCTCTCCAGTTCTGTGTCTACGTTTCGGCCCTTTGGCTTGGGCAGTGACTCCCCCTATAAGCAGCCTTCCGATGGAATGGAGAGACCGTCTTCTCTGATGGACTCTTCACAGGAGAAGTTCTATCCAGATACTTCTTTCCAGGAAGATGAAGATTACCGAGATTTCGAGTATTCAGGGCCTCCACCATCTGCCATGATGAACCTAGAGAAGAAACCAGCCAAGTCTATCCTGAAATCAAGCAAGCTTTCTGATACCACTGAGTACCAGCCAATCCTGTCCAGTTACAGCCACAGGGGTCAAGAATTTGGGGTAAAGTCTGCCTTCCCTGCATCTGTGCGGGCCCTCCTGGACTCTAGTGAGAACTGTGGCCGGCTTTCGTCTCCCCCTGGACTGTTCAGTGCCTTCGGCGTCAGAGGGAATGAAGCGGGGTCTGACCGGTCACCATCGCCGAGTAAGAATGATTCATTTTTCACCCCTGACTCCAACCACAATAGCTTGTCTCAGTCTGCCACGGGGCATCTCACTTTGCCACAGAAGCAGTACCCAGACTCTCCTCACCCAGTCCCACATCGGTCCCTTTTCTCTCCGCAGAACACCCTTGCTGCTCCCACGGGCCACCCACCCACGTCAGGCGTGGAGAAAGTCCTGGCCTCTACCATTTCCACCACGTCGACGATTGAGTTTAAGAATATGCTTAAGAATGCCTCACGAAAGCCCTCAGATGATAAACATTTTGGCCAGGCCCCCAACAAGGGCACTTCAAGTGATGGTGTCAGCCTGTCAAACCTCGCCCAGCTGAGCTTGACGGCCGCCGATCAGCAGCAACAAGAAGAGCACTATCGCATAGAGACTCGAGTCTCCTCCTCCTGCTTAGACTTGCCTGACAGTACCGAAGAGAAGGGGGCCCCTATAGAAACCTTGGGTTATCATAATGCATCCAGTAGGAGGATGTCAGGGGAGCCGATACAGACTGTAGAGTCCATCCGAGTCCCTGGGAAGGGAAATAGAGGACATGGGCGTGAGGCTTCAAGGGTGGGTTGGTTTGATCTGAGCACCTCAGGAGGCTCCTTTGACAATGGCCCCTCAAGTGCCTCTGAGTTGGCATCCCTTGGGGGTGGGGGCAGCGGAGGCCTCACTGGCTTTAAAACAGCACCATACAAAGAACGAGCACCCCAATTTCAGGAAAGTGTCGGCAGCTTCCGTTCCAACAGTTTCAACTCAACATTTGAGCATCATCTCCCCCCATCCCCCTTGGATCATGGGACACCCTTCCAGAGAGAGCCAGTGGGGCCATCATCTGCCCCACCTGCCCCTCCTAAGGATCATGGTGGTATCTTCTCTCGAGATGCACCTACTCATCTACCCTCTGTGGATCTTTCGAACCCCTTCGCAAAGGAGGCAGCCCTGACCCACGCTGCCCCACCTCCTGGGGAGCACGGTGGAGTTCCTTTCCCCACCCCACCCCCTCCTCCGCCCCCCGGGGAACATAGCAGCAGTGGCGGGAGTGGCGTCCCTTTTTCTGCTCCTCCTCCTCCTCCACCTCCTGGTGACCATTCTGGGGTTGTACCCTTCCCAACCCCACCACTGGCAGAGCACGGAGTGGCGGGGGCCGTGGCAGTATTTCCCAAGGACCATAGTTCCCTCCTTCAGGGGACCCTGGCTGATCATTTCGGGGTGCTCCCAGGACCCAGGGACCATGGGGGCCCCACCCAGCGGGACCTCAACGGCCCCGGCCTTAGCCGTGTGCGCGAGAGCCTGAGCCTGCCTTCCCATTCTTTGGAGCACTTGGGCCCAGCCCATGGAGGAGGAGGTGGGGGAGGCAGCAACAGCAGCAGTGGCCCCCCCTTGGGTCCCTCACACAGAGACGCCATCAACCGGAGTGGTATGATCTTGCGGAGTCCCCGGCCAGACTTCCGGCCTAGGGAGCCTTTTCTCAGCAGAGACCCTTTCCACAGTTTAAAGAGACCCAGGCCACCTTTCGCTAGGGGCCCTCCGTTCTTTGCACCAAAACGCCCATTCTTCCCTCCCAGGTACTGATGGAAACTAAGGGAAAGGCATTTGAACAGTAGAGAGCATTGGAAGTAGGAGTTTGGTTTATTATCATTGTTTTTATTTGTTCTCCCTCCTTTGATCTATTTTTTTCTTTCTTTTTTTATTATGACAAAGGACCTCCCTTCCAAATTAAAAAGTTATATATGCTTACATTTCACTATTCCATCCAGTCCTCCCTCCCACTGCACTTATACCTACCTTTTCCAAGATGTTTGTATTTTAAGGGGGTGGGGGGCAAAGAAACACAACTAAAGCCACTTCATTTGGCTGGGGGTTTGAAGGGTGGGGAGGAAGACAAATCTTATTTTACCCCATCTATTGAAGAGTATTACTACATTTGAAATAAAACTTCCATCAGTACAGATAATACCATGTGCAATGTTGGGATGTTATTTGGGGCTTGGCTTATCAAGTAGTCAATGGAGGGATTCTTGTCCCCTTCTCTGTCCAGCTCAGTCACCTGCTGTAACCAGTGTGGCTGTCTTCCCTGTGTGCTCTGTGGCCTGCTGACAGCCAAGAGATGTTGCAGGGGAGGAAATGTGGGGGACCTCGGACCTGTCAAGTTATTTGGGGGCTTTCTTTTGTTTTAAAAGGCATATTGAAGTTGAGTTCTTGACCTTTCTCCCAAAGTCTAAGCCCTTGTTTTTTAATTCAGCCTCTTCTGAGGTTCTATCAGGCAACAACTTTGAGGAAATACAGACCTCATTTTATCCTAGTAAAGAATTTTCCTCCTCTGAGTAGAAGAAAGGGGGCCAGGTATATTAAAATTAAAGAATAAGTAACTGCAATACAGAGAGTGAGAGAAAGGAGCCATTGATGGTATGATCTGACTTGGCCATCTGTCATAAACATATTTCTGAGGTGGTTTCACATATCTGGAATCAAGCTCTTGCTTCCTGCTTTTTTTTTTCCTTGACTTTTTCTCCCTCAGTTTTCTCGTCTACATTTCTAGTCTAGCCGGAAAGTCACTGTAGTTGACAGTAGATACAGAGGTGCAACTGAAACATTCTCCCAGTTGTTTTTTTTTTTTAAGTAGACATTTTTACCATGGTGCCTCCCTAATGTGACATTTGTTGGTAGTTGTCACCAAAAGTTAACTATGAGGAAAGAGAAATATTTGTCTTTATCTTTCTTTTACCCTTGACCTAGTCCTGTATTCACCCCTCCTCTTGGTATTCTGAAGGAGGAAGTTCAGTAGCATCTTTCTTTATACCTCTTTAGCTCTGTCTTAGTGACAAATGGATGTTATACATATCCTTGCAGACAAATATGAGGACCTGATTAGTTTAAATTTACCCCACTCTATGGATAGCAACCTGTCACATTTCAAGGCTCAAACCTTATCCTCATCTCCCACTCTCAATAGAAAATGTTTATGCCCTTAGTCATTTTACATGAAAAAAAAAAAAAAGTGTTTTTTTTTTCTCCCTGAACTGAAAAGCTCCTTATTTGTATTTCTACAGCTAGTACTGGGAAAAGACAATCACTGCGCTTTGAGTGTTTAGGGACACTGAAAAGCAAATGTTGCTTTACTACATTTTTTTATTTAGTGTCTTACCCTAAAGTACACACTGGTAGTCTCCAGCCAGATGAGTAAAAGACTATAAAAGGAAATCCTAGCAAGTTTCATATTTCCTTCCAAGTTAGTGTAGAAGTAACTAGGAAGTGTGGGGATTGCTTTGGATTCCCCCGGTGAAGTTTTACAGATGGGAGACCGTGGGCAATATAGTGACAGAAGATGATTCTTTGCCTCAGAATAAGCTTGCCTTGCAGGTAAAAGAGCAGCTCAAACCAGGTGTGCATCATAGTTTGGGTGTTTTTGTGTAATTTATTCCATGTTACTTGTTTGGTTTCTGTGGTTTTCTGTGGTTAGGATCTTGCAAGTCCTCCATCTTCCTAATGCATTTCTGGTCTTAAGCCAGCTGTTCTTTCTTTGACCTTCTCAAGCCTCTCTGCCCTGTAGCTCTCCCTGCATAAAAACGCATGATACCACAACATTTAAGTGGGATGAGATATATAGTGTAGCAAAGCAAAGAAACAATACAGTTATACTGAGTCCTAAAACATTTGTTTAGAGAAAAGTATAAAAGAGTGTGAGGGTGGGGTGGGGGGAGGTAAAGGGAGAAAGTTTTAACTCAAAACTGAAATAGGTTTTTTTTCTTTTGCAGAAAATTAAGTGGGATGTTTTTCATTCTAGAATAAAAGAATGTGAATTCTTTCTGCTGCTCTCGATTAATCTAAAAGTAGCGTTTACTTGAAAAGGCTCTCTGACCATTTGATTTTATCAGAAAATGGGGGGTTGGTCAGCAAAGTGGTTTCCTGAATGTTGGGGCAGGTTAATTGTCCTCAGAAGCATGATAGCTAGTACATGAAAGGGAAGACCTTGTACAGTTATAAAAGATGGACTTTAAGGGTTGGGTTTCTGTGGAGTGTGTTTTGTTTTTTTAAGCCACAAAATCCATTTGTTTCAGGATGGAAATAAGGATTTGTATGTAACTGTCAGCTGTTTGTTAACTTGAAGGACATCTGCCTACAGCAGTCAGTGAAGACAACGATGTGTGTATATATATGTGATATAGTGAAATAAGATAATTCTGGTATTCATAACATGAAACAAAGGGGTTTTATTCTTTCTGTGTCTGTGATTTAAAACTCCGTGCCCATGCTCTGACTTTTGTATTTCAACCTCAGAACAAGATTTTTAAAAAAGCATAGTATAGTGTGTCTTGGCAAGGACATGATTCAGTATGCAAACAGATAATGCGAAGTTGTTACTAAGGTTCTTGGTGCTCACTGTAAAATCACAGACAGAGAATCAGTGGGTACGGCATGAGTACACTGGTACCACTTAAAATTCAGTGATCCAATATCAGAAATTGAGTCCTTAAATATTCTGTAAAAGTTTACCCTTCAGTCAGCTTAGATTCAACCTCTGTCCCTGCTCCCATTTGCCCTCCCAAATTCTGTTGAGAATAAATAGAATTTGGTTTATTTCCAGGGAGGGTAAAATGATAAGAGAATAGGCCTTTCATCCTTTCCAGTCCCAGGAATACAATGTTTGTGATGTATATGGTACAGCAAACCTATCTAGATAATGTGAATATGCTAAAACTCCTAATTGCAGAATATTCACTATCAGTGGTTCATGCAGAAGTAAGCTTCAGCTGTTACTGTTTTGAAGCCGCTGTAAATTACTGCTTTTTCTCCTTTTTGCCTCCCCTCCTTCCCCTCCTTTTTTTGAATGGGCTGGGGTGCCTGTTAAGATTTAAATTAGATATGTTGGATTGATATTCTCACGTGTTCAGTGTGGAAAACAAAATAAGTACATGCTTTAGAGGCAACAACAATGAAATCCTTTTGAAATGTGTATTAATATCATTTAATAAAATAACTAGTTCTAAAGGTTTGACATTTTTCTTTGAGATTTGGGGCTTTGACCAAGGGCCCCTGGCTTCTCTGGTGAATGCAAATAGGAAGGAACTTCTCCAGAAGCTGAAACTGCTGCTTTGAGGAACAGGCCTGTTGTTGGAAAGACCTAAGTTTTCTCCAGCAAAGACCCTACATGACTGTCCAGGGCTGAAGGTGAAACCAGCTACAGGATTGCAGGAAGAAAAGCCTGAATATATCTCTGAAGATACAGTTGTATTTGCTTTTGGTCTAAACGTGCAAGGAGGGTAGAGGGGCTGGTGTGTGTGCACCTGCACAGGTCTGAGGCAAACACACGCCCAAGACCCCCCATCTCAAGCCTGCCTTGCGACTGCTTGCGCTTTCCTCTCTTCCAGCCATTCCTTTTTTTTAAAATCTCTTTGCCCCCAATATTATGTTTTTGTTTTCCTGTTTAATAAAGTATGGTTTCCTTTGTTGTGTGGT EMBV3_32140 CTGGCCCAGCACAGATTCTGCCTGAGTCTCCTTATTTATTTTCTCCAGAGTGGAGCTCGG Gene GeneID:511933|TBC1D10A:NM_001104974:53_cdna Constitutive 0 NULL GeneID:511933 17 GENE TBC1D10A MGC166144 TBC1 domain family, member 10A EMBV3_21791 TGCTGGGGTCTCCTGCCCGCGCCGAGGAGAGACCTTATGGATTTTCTCAACCCAAACGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13359 AACTTTCCCAGCCCTGTTCCCACCTCAGCCTCCAACATCACTGTCGTCTACACCATAAGT Gene GeneID:616252|GIF:XM_002693814:63_cdna Constitutive 0 NULL GeneID:616252 15 GENE GIF NULL gastric intrinsic factor (vitamin B synthesis) EMBV3_37651 GCGGTTGCTTATGGAGATGAGTGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAG Gene BVT0102_115290 + 0 NULL GK000004.2:113836844-113866798 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00222868 TCONS_00175509 TCONS_00118459 TCONS_00118040 TCONS_00238581 TCONS_00210913 TCONS_00250275 TCONS_00219592 TCONS_00226167 TCONS_00147538 TCONS_00252210 TCONS_00040258 TCONS_00250203 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00174807 TCONS_00031887 TCONS_00250681 TCONS_00030963 TCONS_00107436 TCONS_00078426 TCONS_00207934 TCONS_00170890 TCONS_00174805 TCONS_00206300 TCONS_00171428 TCONS_00242416 TCONS_00207933 TCONS_00205125 TCONS_00107367 TCONS_00174806 TCONS_00230721 TCONS_00118487 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00242415 TCONS_00001866 TCONS_00031759 TCONS_00110426 TCONS_00000529 TCONS_00246741 TCONS_00001865 TCONS_00103962 42 XLOC_136175 XLOC_105290 XLOC_072622 XLOC_072206 XLOC_145248 XLOC_129423 XLOC_153218 XLOC_132911 XLOC_137940 XLOC_089425 XLOC_155151 XLOC_024074 XLOC_153146 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_083377 XLOC_104695 XLOC_018132 XLOC_153624 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_126448 XLOC_103679 XLOC_124877 XLOC_103815 XLOC_149080 XLOC_124587 XLOC_063278 XLOC_140211 XLOC_072644 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_149079 XLOC_018004 XLOC_066330 XLOC_000141 XLOC_151107 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_24571 CAACTGGTATTACTGATCATATTGCCCAAGTCAAGGTAAACAAATATGGAGATACTTGGG Variant GeneID:533520|OCIAD1:NM_001015648:110_cdna 688^840 2 EMBV3_11447 GeneID:533520 6 GENE OCIAD1 NULL OCIA domain containing 1 EMBV3_10102 TATGTGGGTTGGGAAAAGAGGCCTGGGTGGAAAGACGGTTTGGATGAAAAGACTTCTGGC Gene GeneID:524255|FZD7:NM_001144091:116_cdna Constitutive 0 NULL GeneID:524255 2 GENE FZD7 NULL frizzled homolog 7 (Drosophila) EMBV3_02809 CACTCGCTGAAAGGGTGTTAGCAAAGGAAGGTGAGGGTAGGGAGTACATTAATTTGGATC Gene BVV0102_060723 + 0 NULL GK000018.2:36243317-36247077 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083020 TCONS_00083025 TCONS_00083021 TCONS_00083019 TCONS_00083023 1 XLOC_051164 Coding TCONS_00083021 XLOC_051164 Coding Coding CDH1 18:36183932-36246819 j TSS62501 6083 1 TCONS_00083021_5 832 0.135295084662173 15 0.90350793499348 1.64070316091521e-08 2.61325678809935e-08 0.000218710158180248 1.09234524081174e-07 0.000416478597367015 5.90461690485612e-08 1.55580503056766e-06 0.000548213064139735 0.000853386174698025 0.00213694970635706 0.000376158985270176 0.000600968757197213 2.36955917101295e-08 2.42778083094574e-11 1.1039996095921e-08 0.0172098067782046 0.021445152170417 0.0368849555141377 0.000760011641387322 3.93930906700355e-09 0.000214227375493674 0.00532029629545508 0.00934796640092947 0.0167065113638706 0.000457495399315242 3.99292224643533e-10 3.41790212570262e-09 0.00275739328080347 0.00158198040262107 0.00631302899620716 NM_001002763.1 CDH1 Bos taurus cadherin 1, type 1, E-cadherin (epithelial) (CDH1), 0.0 4408 99.28 0.409666283084005 NM_004360.3 CDH1 Homo sapiens cadherin 1, type 1, E-cadherin (epithelial) (CDH1), 0.0 2810 81.36 0.480683873088936 TCONS_00083021_5 sp|Q6R8F2|CADH1_BOVIN CADH1_BOVIN Cadherin-1; 0.0 1608 98.91 0.995192307692308 3 coding 1 1 1 1 -0.0146751200957456 0.885324115086972 -0.0275012505815029 0.568625492618036 CCTGAATCACGGCCATCGAGAGGCCTCTCCCGGTGAGGTTATTGTATCAGAGATTGAATCAACTCCCTGACATCACCTCTCATGGTCACAGTGAGTTTTGAAGGATGTGCTGGCCTACCAAGGACAGTCTATGTTTCTGATGACACCCGATTCAAAGTGCACACAGATGGCGTGCTTACAGTCAGACGACCTGTACACCTTCATCGTCCAGAGCTAAGTTTTCTTGTCCATGCCTGGGACTCCACCCACAGGAAGCTCTCCACCAAAGTGACACTGGAGGTATCAGCGCACCACCACCACCACCACAGTCATCATGACTCTCCCTCTGGAACCCAGACGGAAGTGCTCACATTTCCTGGTCCCCACCATGGTCTCAGGAGACAGAAGAGAGACTGGGTTATTCCTCCTATCAGCTGCCCAGAAAATGAGAAAGGCCCGTTTCCTAAGTCGCTGGTCCAGATCAAATCTAACAAGGAGAAAGAAACCCAAGTTTTCTACAGCATCACTGGCCAAGGAGCTGATACACCCCCTGTCGGTGTTTTTATTATTGAAAGAGAAACAGGATGGTTAAAAGTGACACAGCCTCTGGATAGAGAACAGATTGCCAAGTACATTCTCTTCTCTCATGCCGTGTCTTCAAACGGACAAGCCATTGAAGAGCCTATGGAGATTGTGATCACCGTGACCGACCAGAATGACAACAAGCCCCAGTTCACCCAGGAGGTCTTCAAGGGGTCTGTCCTGGAAGGCGCTCTTCCAGGAACCTCTGTGATGCAGGTCACGGCCACAGATATAGATGACGAGGTGAACACCTACAACGCTGCCATCGGTTACAAAATCCTAGCCCAAGATCCCATGCTGCCGCACAACAAAATGTTCACCATCAACAAGGAAACAGGCGTCATCAGTGTGCTCACCACCGGGCTGGACCGTGAGAGTTTTCCCACATACACCCTGATGGTCCAAGCAGCAGACCTTAACGGCGAAGGCTTGAGCACAACTGCAACGGCCGTGATCACAGTCTTGGACACCAATGATAATGCTCCCAGATTCAACCCAACCACGTACGTGGGGTCAGTGCCTGAGAACGAGGCTAATGTGGCCATCACCACACTCACAGTGACTGATGCCGACGACCCCAACACCCCGGCATGGGAGGCTGTTTACACAGTATTAAATGATAACGAGAAGCAATTTATCGTCGTCACAGACCCAGTCACCAATGAAGGCACTCTGAAAACAGCTAAGGGCTTGGATTTTGAGGCCAAGCAGCAGTACATCCTGTACGTGGCAGTGACAAATGTGGCCCCCTTTGAAGTCACTCTCCCCACTTCCACAGCCACCGTCACTGTGGATGTGATAGATGTGAATGAAGCCCCCATCTTTGTGCCTCCTCAAAAGAGAGTGGAAGTGCCCGAGGACTTTGGCGTGGGCCTGGAGATCACATCCTATACTGCCCGGGAGCCAGACACATTTATGGAACAGAAGATCACGTATCGGATTTGGAGGGACACTGCCAACTGGCTGGAGATTAATCCAGAAACGGGTGCCATTTCCACTCGGGCTGAGTTGGACAGAGAGGATGTCGATCATGTGAAGAACAGCACGTACACGGCCCTCATTATAGCCACTGACAATGGTTCTCCACCTGCCACTGGGACAGGCACCCTGCTCTTGTTCCTCGATGATGTGAATGACAATGGCCCCGTACCAGAACCCCGGACCATGGACTTCTGCCAGAGGAATCCTGAGCCTCACATCATCAACATCAATGATCCTGATCTCCCTCCGAACACCTCCCCCTTTACAGCAGAACTGACACATGGGGCGAGTGTCAATTGGACCATTGAGTACAATGACCAAGAACGTGAGTCTCTGATTTTGAAGCCAAAGAAAACCTTAGAGCTGGGTGACCACAAAATCAATCTCAAGCTCATAGACAACCAGAACAAAGACCAGGTGACCACACTTGATGTGCACGTGTGTGACTGTGATGGGATCGTCAGCAACTGCAGGAAGGCCACGGCCTTTGCTGAAGCAGGATTGCAAGTTCCCGCCATCCTGGGGATCCTCGGAGGCATCCTTGCTTTTCTGATCCTTATTTTGCTGCTTCTGCTACTTGTTCGGAGGAGAAGGGTGGTCAAAGAGCCCTTACTGCCCCCAGAAGATGACACCCGGGACAATGTGTATTACTATGATGAAGAAGGAGGTGGAGAAGAAGATCAGGACTTTGACTTGAGCCAGTTACATAGGGGCCTGGATGCTCGGCCTGAAGTGACTCGCAATGACGTGGCACCAACCCTCATGAGTGTGCCCCAGTACCGACCCCGCCCTGCCAATCCTGATGAAATTGGAAACTTTATTGATGAAAACCTGAAGGCAGCTGATAGTGACCCCACTGCCCCACCCTATGACTCTCTGCTGGTGTTTGATTATGAAGGAAGTGGTTCCGAAGCTGCTACTCTGAGCTCCCTGAACTCCTCAGAGTCAGACCAAGACCAGGACTATGACTACCTGAATGAATGGGGCAATCGCTTCAAGAAGCTGGCGGACATGTATGGAGGCGGCGAGGATGACTAAGGGACTCAAGACTGATGGGAAGAGAGATGGGTCCCTACACTCGTGTGATGGAAAATGCGGGAAACATACTCCTGGTTGTTTGCCAGCTCCCTTCACTTGGGATACGTTTCTGGAGAAGAGACTGATCAGTGATAGCATAGTCCTGATTTCCACTTCATAGATCTAATCTGTGTACTAGAACGATTTAGACTTATTCCTTGAATAATCTTTTTCCTTTCATCATTGTTGACATGGTGATGATGTCCAAAAGACTCCTAAATTTTAATACTTCAAAAGAATAGTTTCAGTCTCAGAAGTTTCTGCTAGGAACTTACAGATTTCCTTAAGGGCGTTGTCTCATTTTTAAAAGGAAGGGGAGGGGTCAATTTCCCTACTGTGTGTGTGTATATATATATATATATATGTAAATTGTGTGCTTTTGTTCCTCCCGTCACGGCACTGATGTCCTGTGTTCTGAGATCCACTCTTACTCCTTCTGAATTTTATTACATTTCTCTGATGCAGACATTATTGGGCCCTTTTAGGGAAAGAGGATTATGTCTTAGGCTGGCCATGTACTGTGTGGGTATTGTGTACTCTTAAGACCTTAACAGCTTAACGGTTTTTCATTTTTATCTTCTGAGTATGTAACTTGTAATGGGCATCTATCCAGTTAACTTGTTCTGAGTAAGGGTGTTGGTCATGTGAATGTCATTACAAGGTACTTTGATTCTAAATAGGGAGGCTGGGCCAGAAGAGGTGGTGAGTTTCAGGTGCCACTGAACTTTTTTTTTTTGACCGCACTGCAGGACATGGGGAATCTTAGTTCCCTGACTAAGGATTAGGCCTGCGTCCCTTAACAGGGGAATTGAGGATTCTTAACCACTGGACCACCGGGGAAGTCCCACTACTAGACTTCTAATGTTTATTTATCGCTAAAACAAAAGAGTGATATATTCCAGGACTTAGAATAGTGCCTAAAGTGCTGTAGCCAAAGACAGAAGCTGGCAAGAGGGCACAGCAGAGGGCAAATGTGAAAAATGGGCTTCGAGATGGCAGGGGCAGTTGCCACTAAGCCTGGCAATTGAGCCAGCTGAGGCTGAAGACAGTTGAGGTGGCTCTACCTCCACCCCCTGGAAATTCTGAACTAGAGGAATCTCAACATGTGTTTCTTGCCAGGATCCTTGGACCCAAAGCACAGAATCCCCAAGCCTGCTTTTGTTGATATTTATAGAGAATGCTAGCTGGTCTGGACACATTTGCCCCAAATTTCAGCTATGAAACTTGAGAATATTTTTCAAATCCAATTTGTTTTTCCTTTGCAGAGGAAGAAAACACTCGCTGAAAGGGTGTTAGCAAAGGAAGGTGAGGGTAGGGAGTACATTAATTTGGATCTTCTTTTAGTTGAAATGCATCTTTTAAGAAACTTTTGACAACCATAGACAAGAATTTTATCTAAATTACTTCCCTACCTATCAACTGTTTTTAGAAGAAGAGGAACATCTCTCAACCACTTCTTAGAATTGTCTTGATTTTTCAGCAATTTAAACTCTAATGTAGTTCTACGTAGAGAATGTCACTATAGTTTTGAGTGTAATATGTGTGTGGGTGCCGATAATTTTATATTTTCTTTGGGAGTGGAAAAGGAAAGCAATTCAAGCTGCAAAAATTATTATTTGTTTTTATAAATTTTATTAAAGAATTTTGTTACACCATTGTCAAACTTCTTTTATTTGATTGCAAAATTCCAGGTCAGACAAATGGTAGGTAAGCTCATTCAAAACATGGAGAGAGAAGCTTCATATTAAAATGTCTATTCCTGAACTTCGTGTCATTCTGTTGGGACTGAATAGGGGGAAGGGGAAACTGTGTTTCTAAGGTCAATTTATTTGAAGGATATCCATCCATGCGGTATGTGATGTGGCATGTGGTGAAACCAATAAAATCTCTTTGTCAGGGGGAAGCTACTGTGGGTTGCACGGAGGGATAGAAAGAAGCAAGGCTGGGGCTTCCCTGGCAGTCCAGTGGCTAACACTCTGTGCTGCCAATGCAGGAGGCTTGAGTTTCATCCCTGGTCAGGAAACTAGATCCCACATGCTGCAACTAAAGATTCCATCTGCCACAACTAAGACCTGGTGCAGGCAAATATTTTTTGAAAAATGTAGTTTCCAATTTAAAGATGTTTTAGTAGGTTTTATTTAAGGAAGAGATGAAGATCCAGGTGCAATTTATTAAGCATGCCTTCTGTGGCAGACATAGCTAAATACTTGAGGACAAACAGTATCACTTTGATTCCCCAAGATAGCCTCGTGAAAATGATTCTGTTACCTTTGAGAGTAGGAAATGGCTGATGGCATAGGGCTGGAGTCCAGAGAAATGGGAGTGACTAGGAAGGGGCCTGACTCACTGAGGAGAGAATTAAACGAACCATTTCTTCCCCCAGTGGCATGGTCTTGCATATGGAACACATCCCATTTCCTAAGGCTTTCAGCAGCTAAGTACTGAAGAGCAGTCATCAGTCATGACGTCAGGCTAACTTAAGGGATCTCAAAGAGAAGCAGGACAGCCTCTTGGGAGCAGTCTCACAGAGAGGGTGTTAGAGCCAGGTGTTGGAGCCGGTTGTGACCATGGTAGGCGAGGTTACTGACTTTCAATGAAAGGAGAGGCAGGCATGCTAGTCTTGCCCTCAGAAACATTGTCCTGGATTTGCAGCCTGCCATTCCCTGGTGGCTCAGATGGTAAAGCGTCTGCCTGCAATGTGGGAGACCTGGGTCGCAAAGAGTCGGACACGACTGACGGACTTCACTTTCACATTCTTTCAGACAACATGAATTTTGAATGTCCCACCGAGATTCCTGTAAGTGAAAAGCTGTTACTGATGATATATCTCCAACCCATCTGTTTTACATATTAACACAATTTTGATGTGGCACGATTTTAACAAACACTGAATTTTCCAGGAATGTCTGTGAATACAGCAAAGATAGAGCTTTTATTGGGAGCTGTACTTAGTTCCTTTAAGAAATCGTATCATCAAGAACAATATTTGCAGCTATTTGCAGTCGGTGTGTGTGTTTAGTAGTTGTTTTTAAATATCACTGAAGTGAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCAACCCCATGGACTGTAGCCCACCAGGCTCCTCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCTGACTCTGTGCGACTCCATAGACGGCAGCCCGCCGTCCCTGGGATTCTCTAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATTGAACCTGGGTCTCCAGCTTTGTAGTCAGACGCTTTACCGTCTGAGCTACAAGGGAAGCACAAATATCATTAGTGAAGAAATTAAACAATTGAGTATTATTTTACATACCGAACTTCATTATAAGAAGGTACGGCATCTGATTACTTCACTATTTCAGTGTTTTGGTGACCAAATGTTTTCATACTGAGTAAAATTCATATTTTT EMBV3_36070 GGATTTCTCCTGAGGGCTCAATGCTAACACTACGTGGAGCTGATTGTGACTCTTAAATGC Gene GeneID:510230|PPP4R1:XM_002697800:407_cdna Constitutive 0 NULL GeneID:510230 24 GENE PPP4R1 NULL protein phosphatase 4, regulatory subunit 1 EMBV3_22709 GACTCGACCTGGCGGAGGAGCTGAAAACACAGCCTTACTTTATCCCCGGACACTTTCAGA Gene GeneID:100336231|LOC100336231:XM_002689968:51_cdna Constitutive 0 NULL GeneID:100336231 8 GENE LOC100336231 NULL hypothetical protein LOC100336231 EMBV3_16247 TCAGAAAGATTGTGGCCAAGTCAGGGATCAGCGTGAAATCCATCAGACCTACAGGGCCAG Gene BVT0102_094835 - 1 EMBV3_25563 GK000004.2:115821950-115880513 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30610 GAATACTAGAGTGAGTTGCCATTTCCTTCTTAATTACTACTAAGACTGTGCTCACGACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30619 TCATTTCATGATGTATGGAAGTCAAATCATTATGCTGTACACCTTGAACTCATACAGTGC Gene GeneID:100297358|LOC100297358:XM_002685298:111_cdna Constitutive 0 NULL GeneID:100297358 2 GENE LOC100297358 NULL hypothetical protein LOC100297358 EMBV3_07263 AACAGCTTTGACCAGTGGGGAGTGGAGCTGGGAAAGCAGCAGGCTAAGATAATTGAACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07173 CCCGCCCTCCAAGTCCAACCTCCGATCTACTCTGGCGCTGAAATGGATTAATAAGGAACT Gene GeneID:100337428|LOC100337428:XM_002692215:1431_cdna Constitutive 0 NULL GeneID:100337428 13 GENE LOC100337428 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_43314 AAAGTTTGGAATATGCTGATTGACCAGGACAGGGTCGCTTGCGCATCCCAGGAACCACAG Gene BVT0102_130243 + 0 NULL GK000010.2:15571045-15589746 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15182 CGCGGAAACGTGCCCTCCAGCGAGCTGCAGATCTATTTAGGAATTAGATTTGGCTTTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32897 AGATCATTCCCCAAGAGGGAAGTTTCTGATGTACCCACAGCCAGAGGCCTTTATGGATGG Gene GeneID:541204|ATF7:XM_002687237:105_cdna Constitutive 0 NULL GeneID:541204 5 GENE ATF7 NULL activating transcription factor 7 EMBV3_31200 GTCGATGTCCACTTGTCCACACTGTGCTGTCGAAATGCCTAACATATGCTCACTGGAAGC Gene BVV0102_262115 + 0 NULL GK000002.2:27380507-27407916 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108409 1 XLOC_064315 NonCoding TCONS_00108409 XLOC_064315 NonCoding NonCoding - 2:27403299-27403834 - TSS80030 535 1 TCONS_00108409_1 72 1 0 0.000127156011462715 0 0 1.55217956643803e-05 0 0 0 0 0 0 0 0 0 0 0 4.93674768360629e-05 0 0 0 0 0 0 0.00017147745065496 0.000501373642646926 0 3.95073626130356e-05 0 3.59071857022026e-05 0 0 NR_045786.1 CERS6-AS1 Homo sapiens CERS6 antisense RNA 1 (CERS6-AS1), transcript variant 2e-44 183 68.41 0.85981308411215 0 noncoding GCTTATGGACATTTGGTAATGTGTTCCATTCAAAGGCTTCAGGTTGAACTCACATTGGAAAGACTAAGGTACTCTTTTGGGTGATTACAGATCTTATTAATAGCTACTTATAATGTTTTATGTTCTTTAATACAATTTTCTCCATAAAAGACAGCATCAGGTATGCTTCCAGTGAGCACATGTTAGGCATTTCGACAGCACAGTGTGGACAAGTGGACATCGACTTGTCCACTACCTCCTTAGCATCTACTGAACGCCCCCTAGGGGACGGGAGGGGACCATGCATGCAAATGCAAACCACAGGGCCTGTTTCCAGCCTATTAAAAATGAAGAATTAAACTGTGGCCACAGTGAACCAGTGTTAATTACTATCTGGTAATTTGAAAATGGTACAATTTCATTTTACCGAGAGAAATTTAAACCTACTATGGGGACAACAACAATGTCACTTAAAAAAATATCTTGCATTTTGCATGAACTGTTTGTGATTGACAGTACTCCTTTCATGGACAGGACACTGGCGCAGACTTTGATC TCONS_00104909 TCONS_00104910 . 3' 4083 TCONS_00104909 TCONS_00104910 . 3' 4617 EMBV3_14552 CTTCCTCTTAGTCAGGAGGCCGGACGCCAGGTCTCCCTTAGCAACTGCGGCCAATAGCAA Gene BVV0102_044785 + 0 NULL GK000025.2:33619647-33672212 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40402 CGAGTCCCGCAAGGCAGACGGTGTGCACACGAGTCCATCGAGACCATGAGGATCCGGCTG Variant GeneID:538144|TMED1:NM_001038563:84_cdna 301^484 1 EMBV3_05019 GeneID:538144 7 GENE TMED1 MGC133977 transmembrane emp24 protein transport domain containing 1 EMBV3_40750 TGGCCTCCTATTACCTGCTGTTGCAGACCTCTGTGATCCGCCTGGAAGCCATCATGAACA Gene GeneID:100295716|LOC100295716:XM_002699369:290_cdna Constitutive 0 NULL GeneID:100295716 29 GENE LOC100295716 NULL similar to transmembrane protein 216 EMBV3_23748 TATGGTGATACGAGTATTCTCCCTCGGAATAATCACCTGAAGAGTTGCCAGCAGCCAGGC Gene GeneID:507647|DSCR3:NM_001040510:18_cdna Constitutive 0 NULL GeneID:507647 1 GENE DSCR3 NULL Down syndrome critical region protein 3 EMBV3_41174 GCGAGCGCGGGCCGCGGAGCAGGCCTCAGGGAGGACCTCCGGATGCAGGCAAGTGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33545 GGAGCTGTCGATGGAGGCTTGTCTATCCCTCACAGTACCAAACAGTTCCCTGGTTATGAT Gene GeneID:783070|LOC783070:XM_002689803:100_cdna Constitutive 0 NULL GeneID:783070 8 GENE LOC783070 NULL similar to 60S ribosomal protein L5 EMBV3_26493 ACACACTGACCATCCATGCATTCCAGTGGACGTAAGGACACACAGCGGCACTATACGTAA Gene BVT0102_436105 + 1 EMBV3_25990 GK000021.2:70861974-70869759 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13123 GCTACTCACCATCCTTCACCAGAAGATAATTCAACGTGTAGACAAGGGGGAAAGGGCCAG Gene GeneID:404080|ORF1:NM_206842:212_cdna Constitutive 0 NULL GeneID:404080 3 GENE ORF1 NULL ORF1 protein EMBV3_07027 CTATTATGAGCGGAATCACAGAATAGCCGTTGGAGCTCGCCATGGTTCAGTGGCCCTGTA Gene GeneID:536469|WDR7:XM_002697774:330_cdna Constitutive 0 NULL GeneID:536469 24 GENE WDR7 NULL WD repeat domain 7 EMBV3_13864 GCACTAACCTCCTTTCTGCTCACTCCAAATTTCCAACAGAAAAGCTGAAAAACGTGGAGC Gene BVT0102_044104 + 0 NULL GK000027.2:1332845-3150994 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00154808 1 XLOC_094548 NonCoding TCONS_00154808 XLOC_094548 NonCoding NonCoding - 27:1461323-1464154 - TSS115967 2831 2 TCONS_00154808_1 79 0.177675732956552 1 0 0.00086987982465052 0.000621243087718819 0.000706615277864875 0.000855054361230615 0.000101643483778423 3.4866650248611e-05 0.000186044523413851 0.000133463451651185 0.000184520616559377 9.59210111260598e-17 0 9.43603101722247e-16 7.09464178469855e-06 4.65248080289084e-05 6.75878342954937e-05 0 0 5.86400167227735e-12 0.000243165708432816 0.00013688401603851 6.53220464345557e-05 0 0 0 0.000364589042234135 0.000167316091998954 0.000199375457883046 0 3.03414297683009e-15 1.6145240202451e-12 XM_583188.7 LOC506707 PREDICTED: Bos taurus zona pellucida sperm-binding protein 3 receptor-like (LOC506707), mRNA. 2e-59 235 89.73 0.0646414694454256 0 noncoding 0 0 0 0 0.416968228051858 0.129783427703628 -0.0184252100960477 0.700715862029992 AAAATCATATTTTAAGTTGTCACGTTTCAAATTATCTTCAATATTGAGAACTTTAAGAAACCCTGTCGTCCCGGTCCAGGACAGAGGTGGCCGCTAGGAGCCCTTCTCAGTGAGGGGAGGAGTCCGGCGGCCAGAAGCACGGGGAATCAGCTCTGTGCAGTGGTCAGGAGCCTAACCCTCCTTTGCTGTGAGGATATGATATTTAGAAAAGCATCTGATTTACAGACTGTTTTCAATTTTCCTCCACATGTGCTGCAGCTCAGTGAGACCACATGGCTCAGCCTTCTACTACCCACAGGCTTCACGTTCAACCTCCATCATGACCTAATCCAGATCCTTCAAAATGATGCCTTCTCACCTGAGTGGATGGTTACAAACCAGTCCTCCTATTCCATGATAAAATGTAGGGACTGCGCAGCATCGAGGGGCCTCTGACATGCCTCATCACAAGCTCCCCTGCTATATATTTTGGTCAGTTTTATTATAGGCATTACTGAATTGTTCTTTGTTGTTATTTAGTCGCTATGTTGTGTCTGCCTCTTTGCGACCCCATGGGCTGTAGCCCATCAGGCTCCTCTGTCCATGAGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCTGACCAAGGGATTGAACTAGAGTCTCCTGCACTGGCAGGCAGAGAATTCTTTACTGCTGAGCCACCTAAGAAGTCCAAATTTTCCTCTACGATACTGAAAACCCAGCTCCTTTCCCTCCTTACTTTCACCTTTGTATTGAAATGTTCCCAGTTGGAGGGTCATCATTAACAGAGGTAACAATCACATCTCATTTGTCTTGCTAATCGTTCCTGCAGTCAGTTTCCCATAGAAACCAAATACTGGTAGAATTGCTGATTTATATCTTTTTCCAAGCTGGAAGAAAAGCTTGCAGATGTCCTGTTCTATCTCTCATCAGAGATGAGGCTCTTAAAGGCTAGGGAGACATAAGCAGATTTAAGCAAGATTCAGGTCTCTTGGTTACAGCTCTGTCCACTGAACTAGCCTGACCTCATCTGTGGTCCTGCCATGTTTTCAGACCTTTCTGGCCCAAGTACTGGTTGGCCTGGCCTCTCAGCTAGTTTTTCTCTTCAATAGTCTTACTTTGCACTAACCTCCTTTCTGCTCACTCCAAATTTCCAACAGAAAAGCTGAAAAACGTGGAGCTATATTTGCTGCCAGGTTAAGAAATATATCTAAAAGAAAATGCATTTGAGTTGAATCATAAAGAACCTTCTGTGATGAAAGGACCCTCTTGACTTGGAAACATGAACCAGTGTGTGAAGATTAAACAATACAGGACATACAGAGAGAAGATCCACTGCTAACTTCTAAACCGGTCATACAATTCATGAGCCATTTTCAAATCAACACAACTTAGTAATTCCACCAAGGACTCCAAAACAGACTTTTTAAGGTCATTGAAATTCTTAAGGAAGCAGAAATGTGAAAAAAAAAAAAAAAAAAGACCAATAAATAAAACAGCTTGTGGGGAAATTGAAGAACAAAGGATCTAAAGTGGTTCCCATTGTATCTGACTCTAAAACCCAAGTGTTCCAGGAATCATACCTGGAACATCAAACCCTCTGTCAAACCCTCTGGACATCAGTGAAGCAGGGAGACAGCAAGTGGCTAGAAAAATACACAGAACTGCATTCTACCTAGAGAGCTCACCTTGTTGCCCGCAGCTCCCCTGCTGGTTTCAGTCACCCCTCACCGTCTTTTCTCCCTGATAAATACCACTCACACCATGTCCTTCTCCTAACACGGAGGCACAGTTGGGAACTGTCTCCCTGGCAAGTCTGCCCTGATGGTCTCAGCAAGCCCTAATACCCGGACAATTTCCAGAATGCCCCAACTCAGTTACTTTGAGAGTAAAACAGTCCATGAGGATCAATGATAAATAGAGATACTGGGATGTAGCTGCAGCCAAGGGCCCTAAACCCAGACTTTAAACATCAAATTTCTGCAAGAACTTTTCATCTGCTGGTGCTGCAACACCTGCTCTTCCAGCCTCTCCAATGCGATGTATTAAATATTCAATTGGGCTTCCCAGGGGTTTAGTCATTAAAGAATCCACCTGCAAAGTGGGACACCTGGATTCGATCCCTGGGTTGGGATGATCCCCTGAGGGAGGGCGTATCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCCACCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATGGGGTCACAAAGACTCAGGCATGACTTACTGACTAAAAAACAACAAATTTAATAAGCAGCTGATTCCACCTTACATGAAGGAGACAGTATTTATAATTCACTCATGAAGTGGAACTCAGGAAAAAGGAGAATTTTGGAGTAAGCTGTGCTTCTGATTGAAAACGGTTCTCAAAGCCAGGGCCTTGCCTTAAGAACACAAACCCTTCCAACAAAAGAATGAGGAATTACTTAAAAAAACACCCTATGTATTTGCCATTTTATATGGTATTTCAAGTGATGATGATTAAGTGTCTAAAGAGATAAGTACTATCACTTCCCATCTTGGGATAAGACACTTCAGACTCAGAGAGGTTAACTAATTTGCCCCAAGACACATAGCAAGTGAGGAAGAAGATTAGGGGCCCCGGACACTCTGAGCCCACGGCCAGTCCAGATGGGAAAGAGGGTACATCTAGAGATCACTGCGAGTGCAAGTCACACAGTCAATTTTTCCTAAGGAAGAAGATTAAATTCTGAAATTCACTCATCAAGCTGAGACTTATCTCAATTTATACATGAATTATCTATTTCAAAAA TCONS_00155755 TCONS_00155756 TCONS_00155757 TCONS_00155758 r 5' 128480 TCONS_00155755 TCONS_00155756 TCONS_00155757 TCONS_00155758 r 5' 128480 EMBV3_37188 CCTGAGCAGTGGCAACAAGCACCACAATGGACTCCTACCCCGACTTCAGTTGGAATCTTT Gene BVV0102_114299 + 0 NULL GK000030.2:18918494-18968814 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243891 TCONS_00243889 TCONS_00243890 TCONS_00243892 1 XLOC_150293 Coding TCONS_00243889 XLOC_150293 Coding Coding ZNF449 X:18906959-18921004 j TSS183403 4333 1 TCONS_00243889_2 519 0.0620816985921994 5 0.691825690686414 0.00124643291545155 0.000483846485396284 0.000334199119878079 0.00056552952300836 0.000431109742935348 6.66129654172133e-10 0.000775768187279935 0.00120098002655838 0.00140608268296359 1.65138748687342e-07 9.07967068686279e-08 2.81888520355738e-05 4.05219013402556e-10 0.000165252569494419 0.000315475698711326 0.000254473819874432 2.98631870049841e-09 9.73432769444552e-07 0.000447902562591158 2.81715417487818e-07 0.00017527473614169 5.96303984613777e-09 1.30104896472463e-09 3.90745386632411e-09 0.000427774783473814 1.44403594402844e-11 0.000522666018130908 7.94732828264297e-05 8.19036896561309e-19 2.36901836230769e-05 XM_005227522.1 ZNF449 PREDICTED: Bos taurus zinc finger protein 449 (ZNF449), transcript 0.0 7337 100.00 0.938610662358643 NM_152695.5 ZNF449 Homo sapiens zinc finger protein 449 (ZNF449), mRNA. 0.0 2765 86.64 0.530579275328872 TCONS_00243889_2 sp|Q6P9G9|ZN449_HUMAN ZN449_HUMAN Zinc finger protein 449; 0.0 986 91.52 0.998073217726397 6 coding 0 0 0 0 -0.00651043583042185 0.966285357869093 -0.0253302927793771 0.705160986553513 AAGGAAAATCCCAGCCTCTCCCGCGTCAGCATCCTTAGAGACTGAGATCGCTGGGCGAGTGTTGTGGAGCCTGCCGGGAGTTGTAGTCCGCAGCGCGGCCGCGCGCCTGCGCCATAGGCAGCTGGACCCGGTGAGCCTGGGAGAGCCGCGGGCGCTGAGGCGCGTATACATAGGTGGCTCCACCCGGAGGATAACAGAAGTAAAGAAATTTGAATCTGCCACTTCAAGTTCCATATAAATTGCACATTTCTGGAAGAGGGCAATGGCTGTGGCCCTGGGTTGTGCAATCCAGGCCTCCTTGAATCAGGGCTCGGTGTTTCAAGAGTATGATACTGACTGTGAGGTCTTCCGCCAGCGCTTCCGGCAGTTCCAGTACAAAGAAGCAGCTGGGCCTCATGAAGCTTTCAACAAACTCTGGGAGCTCTGCTGTCAATGGCTGAAGCCAAAGATGCGTTCTAAGGAGCAAATCTTGGAGCTGCTGGTATTGGAGCAATTCCTAACGATTCTCCCCACAGAGATAGAGACTTGGGTGAGGGAACATTGCCCAGAGAACAGAGAAAGAGTTGTGTCACTGATAGAAGACTTACAGAGAGAACTTGAGATACCAGAGCAGCAGCTCGATAGGCAAGAAATGCTCTTGGAAGAACTGGCACCAGTGGGAATGGCACACATACCACCAAACATCCACCTGGAGTCACCCCCACTCCAAGTAATGGGACCTGCCCCAGAAGTCCCAGTGGCAGAGGCATGGATCCCACAAGCCGGGCCACAGGAGCTGAGCTTCAGTGCTGCTGGGGAAGGCCAGCCCTTTCTCGACCCTGGATACCCAATACCAAAACTTGACGTGAGCTTTCCATTGGAGCATAGAGAAGAGGCATGGGTGAAGGAACTGCAAGATTCCAAAGAAATTAAGCAATTACTTGATTCCAAGTTAGGTTTTGAGATTGGAATAGAAAATGAAGAAGATACTTCAGAAAAACAGAAAAAACTGGAGAATATGTATCCATTTATTGTTACTTTAGAGGGGAATGCTCTTCATGGCCCCATTTTGCAAAAAGACTATGTACAGCTAGAAAATCAATGGGAAACCCCTCCAGAGGATTTACAGGGAGATTTAACAAAACTTGTAGAGCATCAGAACCCCTCAGCAGGAGAGAAACCTGAGAGCTCCAACTTGGAAGAACCTCTCAACCCAAGACCCCATAAGAAGAAGAGTCCGGGTGACAAACCTCACCGATGTTCTCAGTGTGGGAAATGTTTTGCTCGAAAGTCACAACTTACAGGGCACCAGAGAATTCATTCAGGAGAGGAACCTCATAAGTGCCCTGAATGTGGAAAGAGATTCCTCCGTAGTTCAGACCTTTACAGACACCAACGACTTCACACAGGGGAGAGACCCTATGAATGCACTGTGTGTAAAAAGCGATTCACTCGGCGGTCACACCTTATAGGGCACCAGAGAACCCATTCCGAAGAAGAAACATATAAATGTCTTGAGTGTGGGAAAAGCTTTTGTCATGGATCAAGTCTTAAAAGACATCTGAAAACTCATTCGGGTGAGAAACCTCATAGATGTCATAATTGTGGGAAGAGTTTTAGTAGGCTGACAGCTCTTACTTTGCACCAGAGAACACACACTGAAGAGAGACCTTTTAAATGTAATTATTGTGGGAAAAGCTTTAGACAGAGACCAAGCCTTGTTATTCATTTAAGAATTCATACAGGGGAGAAGCCATACAAGTGTAGTCATTGTTCTAAAAGCTTCAGACAGAGAGCAGGCCTTATTATGCACCAAGTCACTCACTTTAGAGGACTTCTTTAAGGATTGTTAAAGGAAATGAATCCTATAGAGATTGATAACTAACCCCAAAACAAAATCTTAAACATGCAGCAGCCTGTTTGTCTTGGAAGAATTCTTTTGTTTGAGCTTGTAAGAAAAGAAAAGCTTTTTTTTCTACTTTAAAAACCCATCTTCCAAGTTATATGAATTCTAGAGTATCTACCTACTCTTGCAGTTTTCATAGATTTGATTTATTCTGTCTCTGCAACTCATTTTTTATTACATTGACAAATTTTGTGAACCAAGCCAACCGTATCGTAAATGTCAGCATAAAAATAATGGCAATCCTTTTCAGGGTAGGGTCAACATAATGGATTATCATATTTATCTGGCATATCTATTACAGTATTACCATAATTATTCTGCTGTCATTATTAAAGGTGATTATATTAGTTTAAAACTTTATATGTGTCCCAGGTGGCAACAAAGGGGACAGTGTATTTTACGAAATAATAAAAATATGTTAGGAACACGTGGATGAAGAGGATTTCGTTTGCCTGCTATGAACTGGGTTCTTTCCATTGAAAATTTTGTTTTTGAAGAAATTAGAATTTTAATCTTTACTTTTGAATTTTGCAAAGTTGACTAATCTGCTTAGTTGGCAGTCTGGGGTGATGCTGCTCAGAGCTGAGTATTGGTTTGATGATTTATTTTGTTCCCAGGATAAGTCAACTCTTTGTGGAAGAACCCATTTGCCAGTTGAAGTCATACAAGTAGACTCTAATTTAATTTACACTGACTGAGGAACCAGTATCCATTGCTTTTCACTCTCCTTTGCTATTCAACTGTGTGTCTCTCAGTGCTTTCAAATTTTATCCATTCTTTAATTCAGTGTCTCCCTAAGTGTGTGTCATAGAACACCTATTTCTGTAAGATAGTTTGCAAATAAGTTTGGGAATCCCTTCCTGCTGTTTCTGCTTTGTAGATTCACAGTGCACTTCAGCCTATGAGGATTCTGAGAGGTCCTCTCATGAAGGTGGAAAAAGTACCTCTTTTGGCTCACTGTTTTGCAATCCTGTTTGACCCCAGAACCCGTTTCCATGTATACCCAATAATAACCCACAGAGCTCTTATTCTGCAAATAGTCTTGGAACACACTGCCTTTAACACATGTTTCTATAGCTATCTGTATAGCCTGATTGTTCTCAAGCCTAGCTATTTCCAGTTGCTTCAAGCGTGTTATGAAAGTCTTTACACTTATTTTTTTTTTTATGTAACATACACACATCATTTAAGGAGGATCAGTAATTCAGATATTTATGCATTGCTCAGTGATTTGTAACCTCTTTGAATTTTACTTATAATCACGCACACATTGCTACTTATATAAATGTTCTCATATACTAGTGGTTATGACTCAAGTTCCTATAGCAAAGGAAGAACTCTCTTTGTCAGTTAAAGCTGTTAATACATGAAAATATTCGTTCAGCCTAGTTCCTTGTTAAAAAATACAAGCAATAGGACATTCAAGTATTTTCCTTTGTGAGGATACCAGTCATCCTTTCCTTAAACTAGAATTAGGGAAAGTATATTTTTTTCTATTCCATTAAAGTTCTTGCAACTGATATTTAATACAAGCATTGTGGGGGTATGTACTATGTGCCTAACTAGTCCTGTTCTAGGCTTAATGGAAACTATTAAAAATTAATTCATAAAGAGTTTATAATATCTTTAGTTAAACAAGAGTTGGGAAACAAATGGCGAGCAGTGCAAGAGAGTTTGTAGTTAAGTGTCAGTTCATACCAAGTACTAGAGCCAGGATGTGTCCTTCATTGTTGTCATCCAGGTCCCAGTATGATGCTGCTATAAGTTTGTGGATAAAATTGAGATCCCAGTAGCAATAAACATGGAATAGGGGAGGAGTCTGAATGTAGAGGTAAATAATACTGAATGTAATGCCTTCTCTTTTCTCTCTTGTGGAATTGCATTCAAACCAGGACAGTGCCTTAGAATGGATGAGCCCAACTGCTCTGTATCTATGCAATATTTTAATAAAGTGAAAACGTATGTGCTCTTCCTGCTTTGATCACATTAACTAATTGTTTGAACTTAGAGATGCTTCCCTGAGCAGTGGCAACAAGCACCACAATGGACTCCTGCCCCGACTTCAGTTGGAATCTTTATTCTCTGCAACCATGGGTTTATGTATCCATTTTAGCATTTAATGCAATCAATTTTAGCTAGTAGAGTTAGTTGTGGTCATAAAAGGAGCTTTATCATCTACATCATGAACACACATGGCTGGATTTTATAGGGTAGAGAACATCTATTCTTTATCTCTTTGTCATAGTATTCTGTGTATAATAAGCACTAATAAATATTTGTGGCATCGGATCAAGGATTATATGAAGTAGTTCTTAGAAACATGTCATAGTTAGAACATGGTATGGATGTGCCTAATTATACTTCTGAGCATTTCAAATAGGGCAAAACATAGTACCCACCTCGTAAGTACTATGAAGATGAAATATATTTTGTTCAGGCCCTGCACAG EMBV3_30419 TCAAACTCACAGCCCCCTCAGAGGAGGCCCCCGTGGAGAAGAGACCGTGCTGCCTGCTCA Gene GeneID:508701|PPP1R16A:XM_002692541:154_cdna Constitutive 0 NULL GeneID:508701 14 GENE PPP1R16A NULL protein phosphatase 1, regulatory (inhibitor) subunit 16A EMBV3_14880 TTTAAACCCTCTTAACCGCGAACCACTTGGCGTCACAGGCGACCACAGACACTGGCCTGT Gene GeneID:618224|PADI1:NM_001101272:299_cdna Constitutive 0 NULL GeneID:618224 2 GENE PADI1 NULL peptidyl arginine deiminase, type I EMBV3_13388 AAGATAATTTACTTTTTCTGCATTGATGGATGACCATCCTGGGAGTGCTGTGATACCCAG Gene GeneID:786987|LOC786987:XM_002697376:10_cdna Constitutive 0 NULL GeneID:786987 23 GENE LOC786987 NULL hypothetical LOC786987 EMBV3_40577 AGGGTCGAAGGGGCTGGACCAGGCTTCAGACACCATTTCATTCAGAAAAACCTGACTGGA Gene GeneID:789034|LOC789034:XM_002692397:329_cdna Constitutive 0 NULL GeneID:789034 13 GENE LOC789034 NULL hypothetical LOC789034 EMBV3_16365 CATAAGGATTTTGCTTTTATATAGTTTTTTACACCATAGTTGAAAATTGCTGAATTGGAC Gene GeneID:520174|NUP43:NM_001103096:2_cdna Constitutive 2 NULL GeneID:520174 9 GENE NUP43 MGC142987 nucleoporin 43kDa EMBV3_36357 CACTCCCATCTCCCAAAAGCTAGAACACTGCCAACTAATCTGTTGTATGGGTCCTTTAGA Gene BVT0101_044389 + 0 NULL GK000030.2:62457282-62476364 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247153 TCONS_00244579 TCONS_00247156 TCONS_00247154 TCONS_00247150 TCONS_00247155 TCONS_00247152 TCONS_00247151 TCONS_00247149 TCONS_00244580 2 XLOC_151246 XLOC_150500 Coding TCONS_00244579 XLOC_150500 NonCoding NonCoding ACSL4 X:62474077-62476455 x TSS183794 2378 1 TCONS_00244579_2 78 1 0 3.19381979704702e-33 0.000128138182637042 8.57087866692885e-11 1.07254531303303e-22 8.95888374020663e-13 1.06024575198219e-22 0.000217724113807124 3.3071049875598e-12 3.50293325280482e-13 5.33509680162324e-59 2.98614995754057e-16 0.000137849174910182 4.7261269728671e-23 7.1175932965374e-14 4.95076135892062e-05 0.00977690898065826 0.00333753786239391 0.00511271179101582 4.70500796894684e-12 1.32378350059822e-23 1.84681718055244e-11 0.0067302813464631 0.00703032606299355 0.0074322355356823 3.50431687114839e-18 0.000294851806796959 7.6340920008888e-14 0.000589186663629806 4.2170745460996e-07 7.54000341879062e-08 XM_005200716.1 ACSL4 PREDICTED: Bos taurus acyl-CoA synthetase long-chain family member 4 (ACSL4), transcript variant X4, mRNA. 0.0 4230 100.00 0.985702270815812 NM_022977.2 ACSL4 Homo sapiens acyl-CoA synthetase long-chain family member 4 (ACSL4), transcript variant 2, mRNA. 0.0 1764 82.03 0.773338940285955 0 noncoding 0 0 0 0 -0.000922320798028009 0.996346616628106 -0.13751944099965 0.131804695075667 TAGATTTTATCCTGGCACATAATTAAGCACGAATTGGCTTGATAACATGGGTGGATTTATTTCTTAAGATTCGAGTGCAAACTTAAAAACCAGAACAAAGCTTTTCATCAAGGAAAACACAAAAATCTAAGTAACAATCCTGCAATCGTGCAATTTAACAGAAAATACAAATATGAATACATTCTAATTTGTAACTACATTTGAAAATTAAAATATTTCTCTCCAAATCCCAAATACCCCACAATCTTTAATCTGTTTTCATCTTGCTATTCCAGAAACATCTGTAACGTGCCATCAGGAAAATATAGGCAAAGATTATTAATCAATCTTTATGACCACAGAAACATCATTCTTAACTTCTGACTTTTTTAATCATCCATCTGTATCTCAGTTCCAAAAAGTGATACAATTATACCTCCACTCCAGAAAAAAAAAAAAAGAATCAATACAAATATCAAGGAGGCAAGATACTTTCACATAATTAAAGCAAAAGTCACAGGTGTTTGACTTAGAAATGTACATACTTGTAAGAAATTTTGGAAGCAAGATACTTTCATGTAATTAAAGCAAAAGTCACAGGTGTTCGTCTTAGAAATGTACATACTTGTAGGAAATTTTTTAAGTACAATTTTATTTGATGGCTGACATGTAATAATAACAGTGAACGATTTAAACCGGTATAAAAATGTAGGATCAAAATCTTTAGGCTCAAATACTTGAAAAGTCACTATGAATATGGAAAGATCTGTTTACATAAACAAGTGTATTTTTTGATGAAAAATCGGGGGGTAGTGGCATCTCCCTGGTCCCTTAACAATATTTGGATTTTCACAAAGAATTAGCAGCACCCATCCTTAAGTGTTAATTACGTGTTTCTAAAGGACCCATACAACAGATTAGTTGGCAGTGTTCTAGCTTTTGGGAGATGGGAGTGGGTGGGGGTGCAAATATCTGAGTATGTATGCATGCACTCACACATTTAAAATCACCATTCCAAAAGGGGGGGTCACATAACTGAAAAAGTCTAAGTACATCATCCTTAGAGGGTCAACAGTGGGCCAGGAACAGCAGAAGCTGAATAGTAGTCTACTTGGTAAGAATGGTTTTTCACACTTCAAAGGCAATTTGGGAAGAATGAGAATACTCACATACACGTAACTTCAGGGGGCCTTGCTTCAAATTTTACATTGCAGACACTGAACATTCTTTACAAAAACCTTCATTCTTGCTTATAATAACACCAGATGATTTTTCCTTTTTACCACCATATACATAACATTTAAATATTTTCTTTATAAATATTCTAGAGCAAAAAGAATGTGTTTTGTTGCAGTGGTGGCCCACAACTGTACAAAGCAATATAAGCAACATATATATATATAGGTATATATATATATATGTATATATATAAAATGATTAAGAAAAAAGTGCAAAGAATAACAGTATTAAGAAGTTTTGTGGTTTTGTTTTTTTTAACAATAACTATGTTCAAGTGTGACTATATTTCAGGGATATATAATCCCAGATTTCAATTAAAGATTCAAAAAGAAGCCCACACACAAAGTCACTGCACAAATATCAGTCCCTTATTGAGTAACTTCCCTTCTCCCAAATCCAGCATTTCCAGTTTCTAAACTCTTCTTACAAACAGGAAAAAAAGTGGTAACAGTGTGTTCTTCCCTTTAACTTCCCCAAATTCATCCAAGTTAATTAATCATTCATAGATTCAAACAAGATAGCAGGGAATTCATTTATCATAATTCGCTTTGCTAAAATTAAAACAAAATGAAATACTTTTAGAAATACCAATTGATCAAGAATCAAATCAGCAACAGCAAACAGACCTTAAATTATGAGTGTGATTTAATACACTTTAAAATCAATCCCTGTTATTAAAGATAAATTCAGAGTCTAAATCCTTCCCCAGGTTCAAAGCTATGCAAGGGTCAGGATTCGAAATACTCAGGATTTCATCATCTTTTCTAACAGAGAAAATGCTCCCACTAAAATTTGATTAAATTTCTATCATTTTAACTCTTGGTTTCAGTCTTATTTTGAACAAACAGAGAAAGGAAATTTTCAGCATTTTGAAGATGTACTTTTATACTTAAGCCATTCAAATAATTACAGCTACTGATTTTCCATCTCCAAGTTTCAAATAACAGTTCAATTTCCCTTTAAATGTATTACTAGATATTTTTGGTGCATTTATATGTTTTTTATTCTAACTTCAGGCACTGTAATTATTCACAATATTATAATGATTCTACATCTAACCTACACAACAATTGTGAATCCTAAAATGGTTTCCGATGTTTTTATTTGATTCTGTATATTACATTACAAATCAAGACAAATGGTTGGAAGAGAATTTTAAA TCONS_00247157 r 5' 0 TCONS_00247157 r 5' 0 EMBV3_12831 GACAGAATCCTGATGTCTTCCACTGCTCCATTTATGTCTGCCAGGGCTCCTTCCCCAACA Gene BVV0102_096899 + 0 NULL GK000026.2:34640037-34805080 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39477 ATGCTGGACGAAATCCTTCTGCAGCTGAGCCAGCCCCTGCACCCCTGCATGTTCCCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36752 TCTGCTAGTGCCATCTTACACACCCTCCTCCTGGCCCATCTCTCTTTCTGTGGAGACAAT Gene GeneID:505451|LOC505451:XM_002683724:2_cdna Constitutive 0 NULL GeneID:505451 11 GENE LOC505451 NULL similar to olfactory receptor MOR136-10 EMBV3_20597 CCGGGGGACATCTGCCAAACAGGCCCAACCCCCCAGAACTCAGGGCACCCCGGCCTTCTC Variant GeneID:616377|CDA:XM_002685724:437_cdna 765^875 1 EMBV3_18929 GeneID:616377 2 GENE CDA NULL cytidine deaminase EMBV3_30121 TCCTTTTTTGGGCCTACTTACAGATGCTTCTCTTCCCTGACTGCTCGACTGTTGCCCAGG Gene BVT0102_135003 - 1 EMBV3_36150 GK000026.2:31744684-31793980 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152107 1 XLOC_092257 Coding TCONS_00152107 XLOC_092257 Coding Coding LOC100847755 26:31745404-31762309 = TSS113527 1018 1 TCONS_00152107_2 69 4 0.940014197823 0.00213177718082478 0.00181018192855972 0.00219861948361842 0.000935977425943573 0.00116899324704656 0.000119619204878549 0.000397546912487751 0.00100619737355301 0.00160542508920881 0.000377650192542894 0.000424961843041222 0.000203722847339558 0.00014797383699398 0.000556652808170251 9.02647631084639e-05 0.00162883021274815 1.98758423383688e-74 0.000300425786269181 0.00194630135453747 0.00169786943291947 0.000336668328322031 0.000839166529026974 0.000153970766512965 5.49830821293134e-05 0.00133285109007259 0.00219941578542623 0.000588229006140841 4.23294958105068e-05 0.000195519519129965 2.84350495188755e-12 XM_003584100.2 BBIP1 PREDICTED: Bos taurus BBSome interacting protein 1 (BBIP1), 0.0 1779 100.00 0.967583497053045 NM_001195306.1 BBIP1 Homo sapiens BBSome interacting protein 1 (BBIP1), transcript 6e-143 511 77.99 0.632612966601179 TCONS_00152107_2 sp|A8MTZ0|BBIP1_HUMAN BBIP1_HUMAN BBSome-interacting protein 1; 1e-34 116 84.29 0.985507246376812 1 noncoding 0 0 0 0 -0.135692773629998 0.331785982697982 -0.00344903213097622 0.955679989169829 CACAGTTGCCCTGGGCAACAGTCGAGCAGTCAGGGAAGAGAAGCATCTGTAAGTAGGCCCAAAAAAGGACCAAAGGTGACCAGACATCCCATGTAAAACAAGTTAATTCCTATTCCGGACTACCTTCCCGTTTGCGGGATTAGAGACAGCAGGTTTCCCGTCCCTTATTTTGCTGGGACGTCTGGTCACTTACCTAGGTGGACAGGAGTTTAGAGCTCCGAAAATCCCTGTTCTGCCCGAAAGTTGCATTTGACACTTCTGAATAGGGTCATGGCAGAAGGATGGGAATAGCTTGCGCCCCCCTTGCCCCAGGGAGTACCCATTCTGACAGGAGTCGAGAAGTGAGTTCCTTCTGTAGGTTTGAGTCAACACCTGTCAGTCATCTTCGTAATACCGGCTTGGATACCTAAAGCTGCGGGGAAAAAGGATCAGGAGAACTTTCAGGACGAGACTGTATCCAACATTTCAGATATGGCAGAAACGAAGTCGATGTTCCGGGAAGTTCTTCCAAAACAAGGGCAGTTGTATGTAGAAGATATAACCACAATGGTGCTATGTAAACCCAAACTTTTACCATTAAAATCTCTGACTCTGGAAAAACTGGAGAAAATGCAGCAAGCAGCACAGGATACAATTCACCAACAGGAAATGACAGAAAAGGAACAGAAAATAACTCACTGAACAATGGCAAGTAACTCACTGAATGATAACTAGCACTTCTACAGAACACCCTACACCTTTCTATTAACAAGAGCTGAAAATAATCTGCATCTGTATGCTGAAAACAGTATGTATTAATAAAAGATAGTATCCCTATAAAAAAAACCAGATTACTAACATTTGGATTGTGAATTTAAACACTGGTTTGTATTGAATATAAGCAATTTTAAAACTTTGAAAAGCTTGGGTTAAAAATAAAACAAAATCTGGGTTCAAACTACAAATTACTGTTCACCATTCCTATCAGTTTTCTAGATAACATTTTTAGTTAGGCAAAGTGAGTAAATGCAACTTCTTT EMBV3_03012 CTGCTCCTGCTCGGAAAGCCAAACTTGGAGATACAAAAGAGCTAGAAGACTTTATTGCTG Gene GeneID:614348|MGC148992:NM_001102276:202_cdna Constitutive 0 NULL GeneID:614348 12 GENE MGC148992 NULL similar to RGC-32 EMBV3_24471 TCGAGAAAAGGGGCTCATCTCCTCTAATACTCGGATTCCTACAACTCGGCCTTTGCCGTG Gene GeneID:317663|CYB561:NM_174837:200_cdna UTR3_Alt 2 NULL GeneID:317663 19 GENE CYB561 MGC140653 cytochrome b-561 EMBV3_39344 TCTGCTTGAGCCATGGGCATTGATTGCGAGCTGAGAGGAGTTGCAGCTGTTGGCATGAAA Gene GeneID:541138|KLHDC3:NM_001014966:347_cdna Constitutive 2 NULL GeneID:541138 23 GENE KLHDC3 NULL kelch domain containing 3 EMBV3_36826 CACAGCAGCCAACAGTGGATTGTAAAGTGTAAAGGCACAGGTTACTCACAATGCTTCTGC Gene GeneID:538967|CDC42EP3:NM_001046444:152_cdna Constitutive 0 NULL GeneID:538967 11 GENE CDC42EP3 MGC137267 CDC42 effector protein (Rho GTPase binding) 3 EMBV3_08275 CCAGCTGAACCATCGCCAAGTAGAACCACCTTTCCGACCCAGAATCAAATCCCGAGAAGA Gene GeneID:518542|PRKCH:NM_001076863:121_cdna Constitutive 0 NULL GeneID:518542 10 GENE PRKCH NULL protein kinase C, eta EMBV3_10602 TAATGACCTCTAAATCCCGACCGCGTCTTGTGCCACTGTAAAAAGGAAGGATCCACAGGG Gene GeneID:100337321|LOC100337321:XM_002696460:75_cdna Constitutive 0 NULL GeneID:100337321 20 GENE LOC100337321 NULL iroquois homeobox 2-like EMBV3_10628 TGACTCTCCACTTTTTAAAAAAGGCATAGATACATGTTTTGGATTCAGAGTATTCCAAAT Gene GeneID:531725|SLC25A46:XM_002689437:34_cdna Constitutive 0 NULL GeneID:531725 7 GENE SLC25A46 MGC152354 solute carrier family 25, member 46 EMBV3_30689 GCCCTCTTCATTGGAAAGCAGAGTCTTAACTCCTGGACCACCAGGGAAGTTCCAGTTATC Gene BVV0102_179279 - 1 EMBV3_20995 GK000003.2:16527319-16530783 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172228 1 XLOC_104061 NonCoding TCONS_00172228 XLOC_104061 NonCoding NonCoding - 3:16527344-16529027 - TSS128328 1683 1 TCONS_00172228_3 161 0.57516339869281 1 0 0.000277557010386765 0.000101499271289209 0.000104471768669169 4.44071805278771e-05 7.13635562873984e-05 0.000136025498607482 7.58694696119263e-05 5.62302138932935e-05 3.75051800926306e-05 0 0 6.3737845539047e-06 1.39853848720579e-05 0 3.20194557966193e-12 0 0 0 0.000102259196773172 2.44835218230255e-05 1.9841357339349e-05 0.000167549294857773 5.45101581455954e-06 0 0.000100645924575357 0.000219886304439502 0.00010372526773998 6.27788927840366e-05 0 8.11425223070666e-06 XM_005197702.1 CREB3L4 PREDICTED: Bos taurus cAMP responsive element binding protein 3-like 4 (CREB3L4), transcript variant X4, mRNA. 0.0 749 100.00 0.245989304812834 0 noncoding 0 0 0 0 -0.392521509270658 0.0730174741874618 -0.0198781559997539 0.749456003776322 GTGTTTGTTTCCAGTGTACAGCAAAAAAGTCAATTATACATATACATATATCCACTCTCTTTTAGATTTTTTTCCCCATATAGGCCACTACAGAGCATTGAGTACATTTCCCTGTGCAATACAGTAGGTCCTGATTAGTTATTATTTTATTATTATTTATTATTTGGCCATACCTTGAGTTATGTGGGACCTTAGTTCCCTGATCCCATATGGAGCAAACCTGTGCCCTCTTCATTGGAAAGCAGAGTCTTAACTCCTGGACCACCAGGGAAGTTCCAGTTATCTATTTTATACAAAGTAGTATGTATGTGTCAATTCCAATCTTCCAATGTACTCCTCACCCTCCCTTAGGCCCTAGAAATGGTGAATTTGTTTCCTACATCTGTAACTCTATTTCTGTTTTGTAGATAAGTTCATTTGTACCTTTTTTTTAGATTCCATATATAAGGGATATTATATGATATTTGTATTTGACTTACTTCACTCAGTATAACCACCTCAAAGTCCATCTACGTTCCTGCAAATGGTGTTAATTTCCTTTTTTATGGCTAAGTAATATTCCATTGTATATATGTGCCACCTCTTCTTTACCTTTCCTCTGCTGATGGGTATTTAGGTTGCTTCCATGTCCTGGCTGTAGGAAATACTGCTGCAATGAACATTTGGGTGCATGTATCTTTTTCAAATTATGGTTTTCTCCAGATATATGCCCCAAATTTGTGTGCTTTATTCACTGAACTATTCTTTATCTGAAGTACTGTTGGGAGGCAGATGAAAATCATACCTAATCAGTATAGCTCCATTAAAAAAAATTTTTTTTGGCCATGCCCAAATGCATGTTGGATTGTAGCTTCCCAACCAGAGACTGAGCCTGCACTGTCTGCATTGGGAAGTCCCCATTATTTTATTCAAAGTGAATTCCTGGGTCATCAGTCTCTAGATGAAGGCAAAATGTCCCAACTTTTGGTATTATTACATTTGTATCATGTTATCTGTCTCCTCTTTGGTAAAATTGTAAAGTGTACAAATACAGAACACATACTGCATATTATTACTGGTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGCCCTGTAGGCTACCAGGCTCCTCCCTCCATGGGATTCTCCAGGCAAGGGTACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCGGACCCAGGGATCGAACCCTGGACTCCCACATTCCAGGCAGACGCTTTAACCTCTGAACCACTAGGGAAGCAGTTACTATTACTGGTAACTATATGCAAAAAATAAGTCAAACTCCCAAACCAAATCCGAGTATTTTAACCTTTTGCAGTTTTCTAGACCCTTGTCCCTCCATTAGTTAACCTGTGAGTATGTATACATAACTGCTGTTCTTTATCAATAGCATAATGCATGGATTATGGATTTGGACAACCCACGATTACGCGACATTCCAAAGTCAACGCGCTGTCTGGTTATTTACTCCCGGCCTAGATTCGGAGTCACGTGGCAAGTGAAACCAAACCTCTGCCCACATTCCCGGAACTTCCCCTCACCCCACCCCCTTCCCTACTGTAAGTCTTCTGGCTCTTACCCTCCTTCTCACGCCGCGGAACCAAATCCCTGCCAGACAAATAAAGGCCCTGGCTGCACTGGCCTCTTTCCCC TCONS_00172227 s 5' 27 TCONS_00172227 s 5' 1709 EMBV3_41047 TGACTAGAGACTGAACCTTATCCCCTGCACTGGGAGCATGGGGTCTTAACTACCAGACAA Gene BVT0102_366572 + 0 NULL GK000006.2:58660259-58731901 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208782 1 XLOC_127294 NonCoding TCONS_00208782 XLOC_127294 NonCoding NonCoding - 6:58691372-58693287 - TSS156289 1915 4 TCONS_00208782_1 70 0.475718015665796 1 0 0 0 0 0 0 0 0 0 0 0 1.19539747182114e-06 0 0 0 0 0.000651672629146215 0.00122241306811788 0.000170329743571532 0 0 0 4.65002130480546e-05 0.00230907351405573 0.000192596237696827 0 0 0 2.0063047562822e-05 5.32358871980417e-05 1.25581652355998e-05 NM_001001159.1 TLR6 Bos taurus toll-like receptor 6 (TLR6), mRNA. 8e-50 203 75.72 0.160313315926893 0 noncoding 0 0 0 0 0.00420691999955271 0.97715444424117 0.0287016383620505 0.594688939050943 CTCTTTGCAACTCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGAATTTTCCAAGCAAGAATACTCAAGTGGGTTGCCATGTCCTTCTCTAGAGATCTTCCCAACTCAGGGATCAAACCGCTGTCTCATCAAGCCTCTTACATTGGCGGGCAGATTCTTTACCACTGCATCATGCACCTTTACTACATGTTATACATCAATAAAATGTTTAAATGCACATAAAACACATATCACTGTGCCTGGCATATAGTAAATGTTCAGTAAACATTTGGTAATGTGAACCCAGCTGCTTCCTGCAATAGTCCGAAGGACCGAGGTTGGCAAAGCACCTGTAGTCTTAGTGTTTTCCAGTGGGGACAGTGCATTCCTTGTGGGTTTAAGTTCTCTGAGTTGTTGAATGTCATTGGAAGAAAAATATGGAATAAGCAGCCTTAGCAATCTGTCTTCCGAGATACTGGTTTGATAAAGCTCTCAGGCAAATCTGTCTTACTCCCAAATGAACTATCCACAGTAGAGGTCTCAGGAAGAGAAAACATAACATAGAGAGTTCTGTTTAGCAATCCCAAGGCTGGGACTAGGAGATAAAAGGCCACAATACCTGTAACATTTGTTAATCCAGCACCTTCTCCAGGGTCACCCTTCCTCAGAAAACAAAAACAACGCTACCTGAGATGGTATATTTATTTTATGAGGAAGGTGGACAATTGACTGGCTAGATAGATCATCTACAGATGATGATGCAGGGTTTAAAATTTTTTTTTAATTTATTTTTGGCTGCCATAGGTCTTCATTGCTTTGCACGGGCTTTCTCTAGTTGTGGCAAGCAGGGGCTACTCCTTGTTGCAGTGCACAGGCTTTTCATTGAGGCGGCTTCTCTTGTTGCAAAGCACAGGCTCTAGGGTGCATGGGCTTCAGTAGTTGCGGCATGAGGGCTTGGGAGCTGCAGCTCATGGGCTTTAGAGTTACAGGCTCAGTAGTTGTGGCACACAGGCTTGGCGACTCCGCAGCATGTGGAATCCTCCTGGACCAGGGATCGAACCTTATCCTGCATTGGCAGGTGGATTCTTATCCACTACACCCCTAAGGAAGTCCTAAGATTTGTGGTTTTAAAGCTGGAGAAAGTCTTATTCACTGATGGATTCGTCTGATTGAGTTTCTTTGCCATAGGTCAAAAGGAAGCTACGATTACCAAAGCAGACATCAAAAACAGAAAGGAACTTATGGCCACATGGGTCAGAGGGAATTTACCAGTTTTTCGAGTGAGGATGGGATGAAGGTGGTTGACACGTTTGCAAACTGCCAGTTTCTGTAGGAAATGTTTATCACTTGATAAACATTTTGTGTTTGGGGACTTCCCTGATTGTCTGGTAGTTAAGACCCCATGCTCCCAGTGCAGGGGATAAGGTTCAGTCTCTAGTCAGGGAACCAAGGTCCCACATGACACACAGGGTGACCAACAATTTTTTTTTTTAAATAACCTGTATATTTGGTCTTCCCAGTGAATCACCCTCACTAAGACTCTGATGTCCTTCATGTGATAATTAACAGCTACATTGACTGTAAACTAAATTCTCCCCAGAAAATCTCAGTTCCCTAATGTTTCAAGGCAAGAGCAGTCTGTCAAAAAAAATAAACAACAACAAAAAAAAACACCATAATATCAAGGGAACCTGAAAAGATGAAAATTAAATACTCATGGAGATGACTTTGATCCCTCCATAGTCTTCCTGTGTTCATCCTTGAAATCTCTATTTGCTCATTTCTCATATTCAAACCACCACTGAGTCCTAAATACATCTGACATCCACCCTCTTCTCTCTATATCCACCCCCATAGCCTGTTTCCTTCATTTCTCACCTGGATTTCTTCAACAGTCTAATCAGACAGGTTGCATACTTACATCTTAGCTC TCONS_00205185 TCONS_00205186 TCONS_00205187 TCONS_00205188 TCONS_00205189 . 5' 31115 TCONS_00205185 TCONS_00205186 TCONS_00205187 TCONS_00205188 TCONS_00205189 . 5' 31115 EMBV3_24721 TTGCCAAAGACCAAAAGTGCTATGAAACTGCCGACACCAGCAGCCAAGGATCCACTGTGA Gene GeneID:523479|ABCA12:XM_002685565:1_cdna Constitutive 1 NULL GeneID:523479 2 GENE ABCA12 NULL ATP-binding cassette, sub-family A (ABC1), member 12 EMBV3_13730 CGGCCTTCCGTAACCAGAAGATGCCTGCGTGAACATAGGCCACAAGATGCTGTAGACTTT Gene BVT0101_019363 + 0 NULL GK000016.2:55517121-55521390 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069675 TCONS_00069674 1 XLOC_042026 Coding TCONS_00069675 XLOC_042026 Coding Coding ADIPOR1 16:55520307-55527455 = TSS51900 2978 1 TCONS_00069675_2 375 0.0846205507051713 7 0.584301105358892 0.000366029518753227 0.00166552706411094 0.00013802085712526 8.54442154919138e-05 9.28480094011824e-05 0.000226083710098201 0.000373854059051729 0.000537252923826033 0.000429446919339316 0.000299985694714971 1.00556744023681e-07 1.47663541755272e-09 0.000522474153592894 5.52632764673569e-07 9.67838094865763e-05 0.000475073387288941 1.00150933942932e-07 2.17141286001698e-07 0.00016766288327021 0.000338492043543681 0.000235402977418774 0.000238221334084608 3.9848743939909e-07 3.06519617940579e-08 0.000440347923011377 6.72296942182033e-09 0.00021988577578144 4.7351602458239e-08 2.44503285555438e-07 0.000378871152632251 NM_001034055.1 ADIPOR1 Bos taurus adiponectin receptor 1 (ADIPOR1), mRNA. 0.0 3404 99.84 0.635997313633311 NM_015999.4 ADIPOR1 Homo sapiens adiponectin receptor 1 (ADIPOR1), transcript variant 0.0 2159 84.79 0.638683680322364 TCONS_00069675_2 sp|Q96A54|ADR1_HUMAN ADR1_HUMAN Adiponectin receptor protein 1; 0.0 719 96.80 0.997333333333333 1 coding 0 0 0 0 -0.200270135729221 0.610961881458007 -0.0718286376631786 0.214637022132661 CCCCGTCACAGGGAGCTCTCTGGCCCCTGAGGCCAAGAGACCCCACTCTCCCCAGGCTGAAGCCGGAGGGCCCCGAGGTACCATCCTGATGTCGTCTCACAAGGGACCCGCGGTGGCCCAGGGCAACGGGGCTCCCGCTAGCAACAGGGCGGCTGACACAGTGGAGCTGGCCGAGCTGGGACCCCTGCTCGAGGAGAAGGGCAAGCGGGCGGTCACCAGCCCAACCAAAGCCGAGGAGGAGCAAGCCTGCCCAGGGCCGCAGGAGGAGGAGGAAGAGGTGCGAGTGCTCACACTGCCCCTGCAGGCCCACCACGCCATGGAGAAGATGGAGGAGTTCGTGTACAAGGTCTGGGAGGGCCGCTGGAGGGTCATCCCGTACGACGTGCTCCCGGACTGGCTGAAGGACAACGACTACCTACTGCACGGCCACCGGCCGCCCATGCCCTCCTTCCGCGCCTGCTTCAGGAGCATCTTCCGCATCCACACGGAGACCGGCAACATCTGGACGCACCTGCTCGGTTTCGTGCTGTTTCTTTTCCTGGGAATCCTGACCATGCTGAGGCCAAACATGTACTTCATGGCCCCCCTCCAGGAGAAGGTGGTGTTCGGGATGTTCTTCCTGGGAGCAGTGCTCTGCCTCAGCTTCTCCTGGCTCTTCCACACTGTCTACTGTCATTCAGAGAAAGTCTCCCGGACCTTCTCCAAGCTGGACTATTCAGGGATCGCCCTGCTGATCATGGGGAGCTTCGTGCCCTGGCTCTACTACTCCTTCTACTGCTCCCCACAGCCTCGGCTCATCTACCTCTCCATCGTCTGCGTCCTGGGCATCTCCGCCATCATCGTGGCGCAGTGGGACCGGTTTGCCACGCCCAAGCACCGGCAGACAAGAGCAGGGGTGTTCCTGGGGCTTGGCTTGAGCGGCGTCGTGCCTACCATGCACTTCACGATCGCGGAGGGCTTCGTCAAGGCCACCACGGTGGGCCAGATGGGCTGGTTCTTCCTCATGGCTGTGATGTACATCACCGGAGCCGGCCTCTATGCTGCACGCATCCCTGAGCGCTTCTTCCCTGGAAAATTCGACATATGGTTCCAGTCTCATCAGATCTTCCATGTCCTGGTGGTGGCAGCCGCCTTCGTCCACTTCTACGGGGTCTCCAACCTTCAGGAGTTCCGATACGGCCTGGAAGGGGGCTGTACTGACGACTCCCTCCTCTGAGCCACCCCCAAGGGCGCAGGAGGAACTTCCCAAGTGCTTTTAAAATAACTTCTTTGCTGAAGTGAGAGGAAGAGTCTGAGTTGTCTGTTTCTAGAAGAAACCTCTTAGAGAATTCCGTATCGACCAAGCTTCGGCCCACTTCACACTCCCTGGGCAATAAACTCCATTCCCTCGCTGAGAAAGGGGCGGGGCAGGTGCGGCCACCCTGCCCCCGGCCGCCCCCCCAGAGACGGGGCTGGGAAGCTCACGGTGAGCTCTGAGCCCTCCTCGCTCCATTCTGGGGAGAAGCGATGGACTGGGACTTCAGAAATTCCGTTTCTGGAAGAAACTGTCCCTCCCTCACCCCTGTCCTGACTTTGTAACCTGGCTTACAACAGGCCATCCGTTTTTCTAGCACACTTTTCAAAAACAATTATAACCTGGTCCCATCTTTCTCGGGCCTGGGCCTGCTCACACGGCAGGAAGAACAAAGCCACCGACTTTTACACAGCCCGGCCCATCGTGGAAGTGTGTCCAGGCTTCAGATAACTTGAGTTTTAATTTTTTCTTGGCAGAGTAATGTAAAATGTAAAGTGGGGAAAGATATTTAATATTTAATACTAAGCTTTAAAAAGAAACCTGCTACCATTGCTATGTATCCTGATGCAAAGACGATGATGATAATAAAGTACAGAAGACACTTGGCGTTCTGAAAGCTGTGTGGTCTCGCTCTTCGCATGCAACTCCAGAGGACTGAAGCCAGCAGAGTCGGTCCAGATTCTGCTGCGGCTCAAGTCTGAATCCCAGGTGCTGCAGGCTGGCGCGGGTGGGCCAGTGAGCCTGACCGACCGATGGTCTGCTCCTCCAGGCCACTCTGCCCGTCTCTACTGGGGACACAGACGCGCCCTGGAGTGGTCAGTGTGCTGCGGCGGCCTTCCGTAACCAGAAGATGCCTGCGTGAACATAGGCCACAAGATGCTGTAGACTTTGAAAACTGCCGTGATTAAGGCTGTCTCACCGGGACGTCACTCCACACCTCCGTGCCTTTGCATACACTGTCCTCAGCCTGACCGCATTCTGTCCACTGGATACGAAGGCCTGCAGTGGTCCTCGTGAGCTAGTGTAGGTATCGCACGGGAGTCTTCGCAAGTTACAGAGTTGGATTCACTTCAGCAGTCAAGTTTGAACAACCAAGTGAATAAATGATCCTTTTAACGAGGCCAGCAGATCTCTGCCTCCAGTGCTAATCAGGGAAACATAAGACCAAACTGACTCCTACCAGATTGGTACAAATTAAAAATCTTAAGATGGTGGGCTTTTCTGGTGGTCTAGTGGTTAAGAGTTCACCTGCCAACGCAGGGGACACAGGTTCAGTCCCTGGTCTGGGAACATCCATATCCCTCTGGGCAACTAAGCCTGTGTGCCCTGGAGCCTGTGCTCGGCAACAAGAGAAGCCACCGCAACGAGAGGCCTGCGTGCCACAGCTAGGCAGCAGCCCCTGCTCGCCGCAACGAGAGGAAACCCTGCCCAGCAAGGAGACCCAGAGCAGCCAAAAAGTAAAAAATCTAAAAAGTCTAAGATTGCATGCTGGTACAGATGTGGATCTGACCAGATGCTGCTGGGGAACCATCCATAGGACCACTTTGGATGTGTGGAGTATACACAGGTTACAACATTCAAACATACGAAACAACACTACAGCGTGAGCTGCATCTGGTATCTGTCCTAGTTACTTTGTTTAAAAATGCTGGGAGACTTCCCTGGCAGTCAGTGGTTAAGCCAC EMBV3_25094 GTGGAATGCACAGTCATACAAGTTACATAGGTGGAGAACGAGGTCTTCAGTTCTTTCAGT Variant GeneID:783784|WDSUB1:XM_002685348:216_cdna 515^699 1 EMBV3_05214 GeneID:783784 2 GENE WDSUB1 NULL WD repeat, sterile alpha motif and U-box domain containing 1 EMBV3_06190 GCCCCGGCTCAAGATGACTACAGATACATACACTTCCTGACCCAGCACTACGATGCCAAA Gene GeneID:777597|ANG:NM_001078144:112_cdna Constitutive 0 NULL GeneID:777597 10 GENE ANG ANG1 MGC137015 angiogenin, ribonuclease, RNase A family, 5 EMBV3_29869 AGTACTTTGTCGGCTACCTCGGGGAGAGAACTCAGAGCACGCCTGGTTACATATTTGGGA Gene GeneID:613869|ALOX5AP:NM_001076293:196_cdna Constitutive 0 NULL GeneID:613869 12 GENE ALOX5AP MGC140744 arachidonate 5-lipoxygenase-activating protein EMBV3_32420 TTCGTAGTGGGGATGTGAAACTCTTCTGTGCCTTCCATCATGATTTCCACATGAAAGCAC Gene GeneID:520313|GABPB1:NM_001075804:68_cdna Constitutive 0 NULL GeneID:520313 10 GENE GABPB1 GABPAP GABPB2 MGC140396 GA binding protein transcription factor, beta subunit 1 EMBV3_08508 ATGAGGCCCTGTTATCATGGAAACAGTTCCAAACCCGAGTCAAGGGGCGGGGATGAAAAA Gene GeneID:505099|LOC505099:XR_084572:26_cdna Constitutive 0 NULL GeneID:505099 13 PSEUDO LOC505099 NULL similar to ankyrin repeat domain 26 EMBV3_14500 TTACCATAAAGGCCTTCATATGTTAATTACATGTTGATGTGTTATATATTTGCTTCAAAG Gene GeneID:540404|PRKAA1:NM_001109802:83_cdna Constitutive 3 NULL GeneID:540404 20 GENE PRKAA1 MGC165837 protein kinase, AMP-activated, alpha 1 catalytic subunit EMBV3_36832 CGGTGGGTGGAAAACTATGGGAATACATCACTGGGGTTTTTCTGGGAATGTAGTCACAAA Gene BVV0102_405523 + 0 NULL GK000010.2:68971664-69250875 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014489 TCONS_00014494 TCONS_00014498 TCONS_00017720 2 XLOC_008315 XLOC_009088 Coding TCONS_00014498 XLOC_008315 Coding Coding PELI2 10:68796763-68978257 j TSS10452 5371 1 TCONS_00014498_5 320 6 0.970439631280545 0.000113300184683013 0.000191642932980072 6.19511145381843e-07 5.96000765954118e-05 1.08641657229215e-05 3.15352783612666e-05 0.000151813708676218 5.63897308756979e-07 2.50895250960434e-09 0.000275902466406993 0.00046119792294772 0.000119072535508184 4.42548159530817e-05 2.52921309362291e-09 1.18300302391793e-09 8.18047919016336e-07 0.00057679999513611 0.000201590711344852 8.53774780569456e-08 1.64773240600206e-20 1.35447948948408e-08 0.00214620733792423 4.35125250996058e-08 0.000723174380869489 2.78383025513864e-05 1.93313081956711e-08 8.59910444573846e-21 0.00040258545332416 0.000214799261054805 0.000337243716739541 XM_002690952.3 PELI2 PREDICTED: Bos taurus pellino E3 ubiquitin protein ligase family member 2 (PELI2), mRNA. 0.0 9652 100.00 0.996276298640849 NM_021255.2 PELI2 Homo sapiens pellino E3 ubiquitin protein ligase family member 2 (PELI2), mRNA. 0.0 2938 80.41 0.58964811022156 TCONS_00014498_5 sp|Q9HAT8|PELI2_HUMAN PELI2_HUMAN E3 ubiquitin-protein ligase pellino homolog 2; 0.0 671 98.75 0.996875 1 coding 0 0 0 0 -0.611876011785193 0.0325200437394365 -0.0347245515682117 0.559956873793578 GCACTTGTGGATCAGTCAAGGGTACAATGGTGCTTTACCTAATGGAGACAGAGGCCGGAGGAAAAGCAGATTTGCTCTCTATAAGCGGCCAAAGGCTAACGGAGTCAAACCCAGCACAGTCCATGTGATATCCACTCCACAGGCGTCCAAGGCTATCAGCTGCAAAGGTCAACACAGTATATCGTACACTCTGTCAAGGAATCAGACTGTGGTGGTTGAGTACACACATGATAAAGATACGGATATGTTTCAGGTGGGCAGATCAACAGAAAGCCCTATCGACTTCGTCGTTACAGACACAATTTCTGGCAGTCAGAACAATGATGAAGCGCAGATTACACAGAGCACCATATCTAGGTTTGCCTGCAGGATAGTCTGTGACAGGAACGAACCTTACACAGCACGAATATTCGCAGCTGGATTTGACTCTTCCAAAAACATATTTCTTGGAGAAAAGGCAGCGAAGTGGAAAAACCCCGACGGCCACATGGATGGGCTCACGACCAATGGCGTCCTGGTGATGCATCCAAGAGGCGGCTTCACGGAGGAGTCCCAGCCCGGGGTCTGGCGTGAGATCTCTGTCTGTGGGGATGTGTATACCTTGAGAGAGACCAGGTCTGCGCAGCAAAGGGGAAAGCTGGTGGAAACTGAGACCAACGTCCTGCAGGATGGCTCCCTCATCGACCTGTGCGGGGCCACCCTGCTCTGGAGAACGGCAGATGGCCTCTTTCACACCCCAACCCAGAAGCACATCGAAGCCCTGCGGCAGGAGATCAATGCGGCGCGGCCGCAGTGTCCAGTGGGGCTCAACACCTTAGCCTTCCCCAGCATCAACAGAAAAGAGGTGGTGGAGGAGAAGCAGCCCTGGGCGTACCTCAGCTGCGGCCACGTGCACGGCTACCACAACTGGGGCCATCGCAGCGACACGGAGGCCAACGAGAGGGAGTGTCCCATGTGCAGGACTGTGGGCCCCTACGTGCCGCTCTGGCTCGGCTGCGAGGCGGGCTTCTACGTAGACGCGGGACCGCCCACTCATGCTTTCACCCCTTGTGGACACGTGTGCTCAGAGAAGTCTGCGAAATATTGGTCTCAGATCCCGCTGCCTCACGGAACTCACGCCTTTCATGCCGCCTGCCCTTTCTGTGCCACACAGCTGCTTGGGGAACAGAACTGCATCAAATTGATTTTCCAAGGTCCAGTTGATTGATGCCCTCAAGAGCCATCAACGACTTTATTAACAAGTTACTGTGAAGATTTTGCCACTAACTCTAGATTTTACCTTTTTATAATGCCGTTTATTTGGGGGAGGGGGGGGGGTCCTGAAGCTAGGAAGAAAGAGGGGCACGGTGATGAAACATGCCAGGCATTGACCATAAAAGTGGTGTGTTGCATGCTCAAAACAGCGGCATCATCATTGAAGTGTGCTTGATTAAACCGTAATACCTTTGTAACAACTGGATTTAAAATGCCATGCTTTCATTTCAACCTTGGGGTTTCTTTGGTAAACTGGGACTGGAGTTTAAATCCTATTTTAAAACTCCAGAAGAAATGTATTCAAAAGTTGTTGGCTCTTAATTGCAACCTTCGGTGCTGCGTGGTATAGGTTGTAGTCATGCCATGTCTGGAAATACTTAATACAGATTAGAATCTGACTAGATGCCAAAAGAGTGGCTCTGTAAGATGATGTTGGGGACAGGAGACCTTAAGTACAGGTGGTTGTTTTGAAATCTGGGGCTTTTTAAATTTTTCTTTTGAGGGGAGGGAATATGTTGTCATTATTATTATTTCTTTTAACTTCAGTGGAATTTAATTACTTTATACACACATTCATCAAATCCCTTGGCATTTCAAACAAAGAATTTTCTATAACTTTTTGGTCTGCCTTTTGATCTGCCATGGTCTGTGTCCCTGACACTCATCTTGCATGGGTAGAACTATTTGGTTGATTAAAATGTAACAACTCTTATTAAACATTCATTAAATGAAGGTGATTATTGCAGCAGGAAACATGGCCCAGGTTATATAATATCAAGTTCATTTGCTTACCGAGTAATTGAAGAGTGATTAGAAATAAGGTTTTACTCTTTAAAACCACTTGTTGGGGTTTCCTAAGTTTTTCTTAAGAAAGCCAAAATTCTGTGAACTTAAAAGCAACATGTTACAACGATGCAGTCAGTTTTGTTCGCTCCCCTTCTGCCATCTGTCGCCTTCCACTGCAGCTTACAGAGCCCTGTAAGTTTTGAAAATGTTTGCAAATCAAACTAAATTTAAATGTAATCATTAGATACACAACACCAAGTGGTACATCTGCAGAGAGCATTTGAAATTCCTGATTTCGAGAGAGCAAATGAGTGTTTACTGAGGAATAATTAAATCAGAATTTCATATGAGCTCCACCAGCCCTCTCTGTTAGTTTCATTTCATTTTTGAATAATAATTCTTGGATGTTCGTTCTCTGTGCTCGGTACCAGTGTATCACCATTCCCATGATGCAAAGATCCTTCAGGACATGCCCCTGCCAGAGCTGGCTGGGATGAAAGCTTCCTGCCACATGGAGCAACTGTTTAAATTAACATCCTCTTAAATTGACCATTGCAGATTCGTGCCGCATTTTTTTAACCTTTGTAAAGATATATAATTTATATGATTCTAATATACTGTATTCCTGTTCTAATTGGATTTTTCCATGGTTTGCCTGCTGGCAAATATTTTGCCTATTTTCACTTGTTCTAACCCATTTTGAAAGCCCTTTTCCTTAACATGATAAGATCTATTCATCTTGATTGCTGCTGCTTAAGTTGATTTAATATATAAAAAGTTCAGCCTCTAAGTTTTCAAATAGCTTTACTTCTTAGTGGAGATTATTGTTTATGATGAGGTGGTTTTGTTTTGGTAATTTTTAAGTGCTGTGAAAATCCAACAACAGTCCTCTTATTGATAGCTTACTGTATTCTGTATAGCTTGCTCAACCTGCAGATAGAGAATGAAACAAAAAAATGAAATTGCCCAGAATATCGAATGCCTTTTGACATACCCAGAGTCTCCCATGGTTAGCTTTTACCAATGTAATCTGTGCCGCTTTAGGCTCCACAAAATGATGCAGGAAGCACACAGTCCCTTTTCTTGCCATATGAAGAAGGTGATTTGAGGAGTCTTGATACCTTAAAAAGCATCTTGTAAGATAAATAGGTAATATCTTAGCCTTTCTAGATGCAAGACTATCAAAAACTTTTTTTTTCCAAAAAGTCACCATCTGATATAATTTTCTATTTCAAGGACTATAGTAGTTAAAGTGTAGGACTTCTACATCAGCCTATGCTGATGCCCCAAAATAGTTATGTTCCAACTTGAAAGCTTTGAATTTTAGTAAACTTGGGTAAAAGATTCCAAGCTCTTGGAAGGGGCAACAGTGACCCACCCTCTGTTAGTGCCACCCACATCTTTTCTTCTGACTTCCAAGTGAGGTTCCCTTTCCCCTGCCTGGGGAACCACAGCTAGGTCACACCTCTGTAGAAGGAAGCCAGGCTCATCTTGGCCACTTCCAGTAAGATCTGCTAACGTTGATTAATGAGACTCCCCCTACTCCCCATATTTGAGAGCAATTTCATTTGTGAGAATAAAGAACTCTAGCTCAGAGTAGAGTCATATAGTTCAGAAAAGGTAACTTCTCAGAGGTCATGCCTGTTGTTATGTCTTGCTTGACATCACATTCAAGGACAAATCCCACTTCCCAGGTGTATACATAGGAAATTGCAGACTAATTATCCTGATCTCAGCCTGACCAAAATGCCTTTTGTGACTACATTTCCAGAAAAACCCCAGTGATGTATTCCCATAGTTTTCCACCCACCGCCCCCCACCCCCAGTTGTTTATGCCAGTTTATTGCCAAAAAAGAAGAAGAAAAAGAAAAAAAAAGGTTCAGAGTTAATGGGATACAACTCTGAATATTTTTCTAGCCTGGAATTTTTTTTTATTATCACTAATCGGTGCTGCCAGGTCATGCATGCTGCAACTCTACATTTTCCTTATTTGGTTTCACTTTTTGCAAGAAGGGCTACAGTTCACATGGCAGAGTAAGTATTATGCTTTCTGGTTTTTTTTTCTAACTGTAGCCCAAAAGAATTAAAGTCTTTTAATATAAATAGCATATTTATCATTCCTCGATAGTTAATTATAGAGTTTGGTACCTTTGTGCCTCAGGGAAGCCACGTGACATAACTGGTTATAGAATTTCAGGGTTAGGGTTTAAAGAAAGGAGAAAGCCATTGGAAAAATGATGGGCTCCATTAAGGAGACTAATGAATCTGGATGCAGAAATATGCCAAGAACTGGCATACACATGATTGTAGTAGAATTTATTTCCAGGATCAGTAGGGAAATTACTTTTAAGTTATTACATCTACTATATTATCAAAGTTGAGGAGAACTCTTTTCTTCATAAAGCTTCAGTGCTTTATTTTTGCTTACATTAAAAAATTTTTTTTTCAACCCCTGCTGTTTGGGAGCTCAGTATTGTTATTTGGGCACTTTTTGAGAGTTTAAAAAGGAGCATGTTTTCTCCTTAATTTAAGTGTAACATAGGTTACAGAGTTGTTACCTGCAGTTCTATGATTTTGATCAATGTTCCTTTTTAAATCCATTCTGTTCTTTGGATTGAAAGGATATATGATCACGATGTTGTTAATGCTGGCTAAAAAACACTTGTCAGCTTCATGCAATCCTGCCTTTTAACAGTGGAATTTCTGATAGACAAACAACAGAATCTTGATTTTAAGCCGGATCCAGCTCTGTTCTTTTGGCTGTAGCTCTTACATCTCCACAGTTTAGCCTTCGTGGGCAGAGGGTATGAAGTTCCTCCTTGAGTGCTAGAAGGAGAGCATGGCTCTGTTATCATTTCTTTATGACCCAGTCAAAGACCAGTAAGACAACTCCAGAACCTTTTTAAAAGAATGTAAGCATTATTGAAGCAGTAAAACAGAAGGTTCAGTATTTCTTTTTAGTAAAACTAATATCCTCTCAAGTTTTCACCCTTATGCAGAATCCCTAGAGGAAGATAGGGAAAAGCAAATATTTTTCCAGTTCTACTTAACTATTTCTAAACAAACAAAAACTCGATAAAAGGGAAGTTGTTTCTTTTTAGCTGAGATGACAGATTGTTTCTCTGTATTAAATAGTCTAGAAGCTAAGAGGGTGGTCATATTTACCATGTATAGTGTTATGAGCAGTTAAATTTTATGGATATATTTGTAAAACTGTTCTTTTATATTTCATGTCAAATTGAAAAGTTTATTTCTTCACTATTGTATCTGTGGAAATACAAGCCATTTTACAGGAAAAAAATCTTCAAAAACTATTAAATGGATCTCGGTA EMBV3_17194 GAGTGAGCTACATAAAACGTGCCTCAGTATACCCCATCGACCTCAGCAAGCAATCAGGGA Gene GeneID:521939|CCNA1:XM_002691801:440_cdna Constitutive 1 NULL GeneID:521939 12 GENE CCNA1 NULL cyclin A1 EMBV3_00980 CCTCAGTTGCCCTTAAAACAGATCTCTGTCTGCCTGCTTTGAACAGTACTTTTTTCCCTC Gene GeneID:100124505|PDE4B:NM_001102546:2_cdna Constitutive 2 NULL GeneID:100124505 3 GENE PDE4B MGC152127 MGC154987 phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila) EMBV3_42294 TTGAGAAGCAGCCCTCCCACCATCCTTTGCAAGTCAAGAAGCAGTCGTTCCCAGATGTCT Gene GeneID:539794|DCLRE1B:XM_002686174:339_cdna Constitutive 0 NULL GeneID:539794 3 GENE DCLRE1B NULL DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) EMBV3_31071 TTTGCCTCCATCCCCAGCCCCTGGCAGACAACAGAAGTCTCTCAGTTAAAACCATGTAAG Gene GeneID:534455|RNF216:XM_002698224:818_cdna Constitutive 0 NULL GeneID:534455 25 GENE RNF216 TRIAD3 ring finger protein 216 EMBV3_11686 TATAAAGAGAATGTTGATGGCGCCGTGTCGAAGCCCCTCTGTATCCATTCATGCGTGTGG Gene GeneID:538485|CXXC5:NM_001038176:14_cdna Constitutive 0 NULL GeneID:538485 7 GENE CXXC5 MGC134160 CXXC finger 5 EMBV3_41702 GAAATCACCAACCGGCTTGCTAAGAACCAGACTGCGGAGAAGGAAGAATGTGAACACTGG Gene GeneID:100296246|LOC100296246:XM_002691246:230_cdna Constitutive 0 NULL GeneID:100296246 11 GENE LOC100296246 NULL similar to heat shock 70kDa protein 8 EMBV3_34577 GCTGGCCATGAGGACTCTGCATCACACCTACCATGCTTCTCTAAAAGATCTGGACTTTCT Gene GeneID:532910|LRRC28:NM_001038156:44_cdna Constitutive 4 NULL GeneID:532910 21 GENE LRRC28 MGC134389 leucine rich repeat containing 28 EMBV3_15109 ATGGTCAGCTCCTGTTGTGGCTCCGTCTGCTCTGACCAGAGCTGTGGCCGAAGTCTCTGC Gene GeneID:618491|LOC618491:XM_002695983:343_cdna Constitutive 0 NULL GeneID:618491 19 GENE LOC618491 NULL similar to keratin associated protein 4-7 EMBV3_16524 CCATGTTCGGAGGGCTGACTTTGGATTCACCATCAATAAGACCCTGGCCTACGGCTACAT Gene GeneID:614603|SARDH:XM_002691666:421_cdna Constitutive 0 NULL GeneID:614603 11 GENE SARDH NULL sarcosine dehydrogenase EMBV3_24401 CCTACATGTTCATCATCAAGACAATTCTGAGGCTGCCTTCTGCCAGTCAGAGGAAAAAGG Gene GeneID:100298808|LOC100298808:XM_002687487:354_cdna Constitutive 0 NULL GeneID:100298808 5 GENE LOC100298808 NULL similar to olfactory receptor 49 EMBV3_24080 CCCCAGCCTTCACTGCAGCACTATTTACAGTAGCAAAGACAGGGAAGCAAACAAAATGCC Gene BVV0102_287461 + 0 NULL GK000018.2:2536970-2590731 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25951 CAAAGTCATTGAGCGGCGCGTTCAGCAGGAGCTGCCTTTCATGGCCACAGAGAACATCAT Gene GeneID:510949|ADSL:NM_001102377:156_cdna Constitutive 0 NULL GeneID:510949 5 GENE ADSL MGC148769 adenylosuccinate lyase EMBV3_39772 CAGAGCCCTGGGAGTCCCAGAGACATGTTCCACAGAACTGTCAAATGGTCCCATTTCCTT Gene GeneID:511052|INTS3:XM_002685999:358_cdna Constitutive 0 NULL GeneID:511052 3 GENE INTS3 NULL integrator complex subunit 3 EMBV3_28331 TTGTCTTGGGAGCCTGTTGCCCATTGCCTGCTTCCCACCTAAGCTGTAACTGAGCTGTAA Gene BVT0102_288089 + 0 NULL GK000020.2:4918946-5226480 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29034 GGGAATTGATGAAATAACCAATTATAATTATCTCTTTGGTCATTTCTCTGAGCAGTAATG Gene GeneID:538198|CNTN5:NM_001102211:2_cdna Constitutive 0 NULL GeneID:538198 15 GENE CNTN5 MGC151600 contactin 5 EMBV3_07838 GTCTCTGAACTACAGCGTCTACACCACCAAGAGTGATGTTTGGTCTTTTGGGGTCCTCCT Gene GeneID:280941|TIE1:NM_173965:14_cdna Constitutive 0 NULL GeneID:280941 3 GENE TIE1 TIE tyrosine kinase with immunoglobulin-like and EGF-like domains 1 EMBV3_15306 AGTGACAGAGCGAAAGTCCTGAAGACAGTGACCTTTGCAAATGATCTAAAACCAAAGGTG Gene GeneID:540640|IKIP:NM_001081736:37_cdna Constitutive 0 NULL GeneID:540640 5 GENE IKIP MGC148509 IKK interacting protein EMBV3_27297 GCCGCTTCCACAGAATTCAGCCAGCCTGAGGGCAGGAAGGAAACTCATCATTTTGATCAT Gene GeneID:614741|LOC614741:XR_084662:19_cdna Constitutive 0 NULL GeneID:614741 28 PSEUDO LOC614741 NULL similar to formin 2 EMBV3_16254 GGCTGAGCTGGCTATTCTGCAACTTGAGATTTCACCATTAAATCATTTCCCTTGAAACTG Gene BVV0101_005848 + 0 NULL GJ059981.1:1-55516 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40061 CCACCTGCCCCTGCGCCACCTCCCTACCCTTGCCCATTTATTGCTATTTACTCTGTATTT Gene BVT0102_006351 + 0 NULL GK000004.2:11922212-12038498 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180833 TCONS_00180834 TCONS_00180832 1 XLOC_110489 Coding TCONS_00180833 XLOC_110489 Coding Coding PEG10 4:11912008-11924713 j TSS135519 5154 2 TCONS_00180833_4 356 4 0.594615869017632 0.000444866955653776 0.000108513036092025 0.000207510198445688 7.60793227862673e-05 8.21924381471093e-05 4.77814404424638e-88 0.000159284989560342 0.000284050757983228 0.000585097387929815 0.000112993997644042 3.58632601525239e-40 7.73146969619706e-05 8.80582239083016e-06 4.84984292898089e-29 5.02342278434071e-08 0.0001647803659087 1.05480321935194e-255 1.05920996061221e-05 0.000186622115760156 0.000585926727474366 0.00052428365775414 2.17084145428367e-05 0.000101550913394135 0.000384422139753969 0.000520660566326588 0.000470974840090642 0.000418285716829897 7.21967995918861e-17 1.26600310669402e-05 1.88610678147432e-14 NM_001172519.2 PEG10 Bos taurus paternally expressed 10 (PEG10), transcript variant 1, 0.0 7377 100.00 0.793364377182771 NM_015068.3 PEG10 Homo sapiens paternally expressed 10 (PEG10), transcript variant 1, 0.0 3745 82.49 0.716724873884362 TCONS_00180833_4 sp|Q86TG7|PEG10_HUMAN PEG10_HUMAN Retrotransposon-derived protein PEG10; 0.0 601 92.40 0.915730337078652 1 coding 1 1 1 1 0.0199858917262705 0.890392140586376 -0.00351311965909806 0.951842868022214 ACACGCGCTTCAACTTCGGTTGGTGTGTGTCGAAGAAACCTGACTACGACCTGAGGAGACCAGCGGAGACGGACCACCGAACCTCGAGGAAGGTCCGCTGAGCGGGCTCGCGTCCGGAGCCACTCCGGGCTGCCGAGCAGCCAGCGGCGCCCACGCCTGGCACAGGTGTGGGACCCCGTCTTTCCAGCCTTCGCAGAGGAGTCCTCGCGTGAAACAAAAAGCTTCTGAAAACCAGAAGGCGAAAAGGTGGACGCGGAGGCCAGGACACAGGCCTCCATTGCCACAGGAGTGAAGCTACTACGCGCGGGAGGTCTCCTCCCACCCCAACCATCACCCTGGGGCCCGACTGCCCACCACCTCCGCCTCCTCCTCCCCCCAACGATCCTTCCTCCCCCTCCAACTCCCCCTGCAGCAGCCAGAGGGGCCAGTACAACCCAAACCTGGGAGAACGCCGGCGGGAGGATCTCTCAGAGGAGATCAACAACCTCAGAGAGAAGGTCATGAAGCAGTCCGAGGAGAACAACAACCTGCAGAACCAGGTGCAGAAACTCACCGAGGAGAACACCACCCTCCGGGAGCAAGTGGAGCCCACCCCCGAGGAGGAAGAGGACGACATTGAGCTGTGCGGTGCAGCGGCCGCCGCCGCCCCAGCCTCCCCTATCGAGGAGGAGTGCCCAGAAGACCTTCCCGAGAAGTTCGACGGCAACCCAGACATGCTGGTTCCCTTCATGTCCCAGTGCCAGCTCTTCATGGAGAAGAGCACCCGCGATTTCTCTGTCGATCGCGTGCGCGTCTGCTTCGTGACCAGCATGATGACGGGCCGCGCTGCCCGCTGGGCCTCGGCCAAACTGGAGCGTTCTCACTATCTCATGCACAACTACCCAGCCTTCATGACCGAAATGAAGCACGTCTTTGAAGATCCCCAGCGGCGCGAGGCTGCCAAACGCAAGATTAGACGTCTGCGCCAGGGCATGGGGTCAGTGGTCGACTACTCTAATGCTTTCCAGATGATCGCGCAGGACCTGGATTGGAACGAGCCCGCCCTGATCGACCAGTACCACGAGGGCCTCAGCGACCACATCCAGGCAGAGCTGGCGCGCCTCGAAGTGGCCAAGTCGCTGTCCGCGCTCATCGGCCAGTGCATCCACATTGAGAGAAGGCTGGCCCGGGCTGCCGCCACCCGCAAGCCGCGCTCCCCGCCACGCGCGCTGGTGGCGCCGCACGTCAACAATCACCACAACCACCAGGTAGACCCGACTGAGCCCGTGGGGGGCGCCCGCATGCGCCTGACGCAGGAAGAGAAAGAGAGACGTCGCAAGCTGAACCTGTGCCTCTATTGTGGGAATGGAGGCCACTACGCTGACAACTGTCCTGCCAAGGCCTCGAAGGCTTCGCCGGCGGGAAACTCCCCGGCCCCGCTGTAGAGGGACCTTCAGCGACCGGGCCGGAATTAATAAGGTCCCCCCAAGATGATGCTGCGTCATCTCCACACTTGCAAGTGATGCTCCAGATTCATCTCCCGGGCCGACACAGCCTGTTCGTCCGAGCCATGATCGATTCTGGCGCTTCTGGCAATTTCATTGATCACGAGTACGTGGCCCAGAACGGCATTCCTCTGAGAATCAAGGACTGGCCCATACTTGTAGAAGCAATTGATGGACGTCCCATAGCATCGGGCCCCGTGGTCCACGAAACACATGACCTGATCGTCGACTTGGGAGATCACCGCGAGGTGCTGTCGTTCGATGTGACTCAGTCTCCGTTCTTCCCCATCGTCCTGGGGGTGCGCTGGCTGAGCACACACGATCCCAACATCACATGGAGCACCCGATCGATCGTCTTCGATTCCGAATATTGCAGATACCACTGCCGGATGTATTCTCCGATACCACCACCTCTCCCGCCACCAGCACAACCGGCGTTCTATTACCCGGTAGAGGGGTACAGAGTTTACCAGCCTGTGAGATACTACTACGTGCAGAATGTGTACACCCCAGTGGATGAGAACGTCTACCCAGACCACCGTCTGGTGGACCCTAACATAGAAATGATCCCCGGAGCTCACAGTATTCCCAGCGGGCATGTGTACTCACTGTCGGAATCTGAAATGGCAGCCCTGCGAGATTTCGTCGCCAGACATGTGAAGGATGGGCTGATCACTCCCACCATCGCGCCAAACGGAGCCCAAGTTCTCCAAGTGAAAAGAGGGTGGAAGCTGCAAGTTTCTTACGACTGCCGGGGTCCTAACGGTGTCACCATCCAGAATCAGTATCCTCGACTCACAATTCCAAATTTAGATGACCAAGCTCACCTGGCGACGTACACTGAATACGTACCTCAAATTCCAGGATATCCGACCTACCCCGCCTATGCGTACCCGACCTACCCAGTAGGATTCGCCTGGTACCCCGTGGGGCGAGATGGACACGGGCGATCCCTCTATGTCCCCGTGATGATCACCTGGAATCCTCATTGGTACCGCCAGCCGCCAGTGCCCCAGTACCCGCCGCCGCAGCCTCCACCGCCGCCACCCCCGCCGCCACCCCCGCCTCCGTCTTACAGCGCCCTGTGAATAGGCATCCTGCCCTTCAGGATCTCCGCCCTCAAAATGAACTCCTGTTCAGCTTCTCATCAGTGACTGTGTGCTACATTGGGCCACTGCACCTTCAGACCAACCTGAGCACAGGCTTTCCTCTGAAATGGTTACAGAAGGTCAGGGCCACCCTGGACTGAAACCCATCTCAAAGCACCCACTGACCTCCACTGTTTGGTGGGAGCAACAAAATATTTACCAACAAATTATCTCTGGTTTTCCACTGTAACTGCCAACCTAATTAAAATTCATAACAAGTTTACTTCCCAGCAAACCCTGGAAACCTGGGTTTTACCTGCTGAAACCTCTGTCACCATCTGAATTATGAGCTGTCAGATTCCTCACTTAAGAGTTACTGAGAAGCTGATGCAAACACAGGAAATGCTGTTTTCTTTACTGAGGGGGAGGTGAGGAGGAGGACATAACTTTCCTTGCAGTTGAGGTACTTTACAGCCTTGGAGGAGCGAGGCCTTATTAAGGAAGCCACAATTACTGGTGCAGTGCCAACGGCTTCCGTGATCTTCTGGCTGCACCCTTTGAAACTTCACCATCTTCAGACTCCATTTCCATGACTCAAGGAGCGGCAACTCGACCAGTTCTCTGGGGAGCAGGCAAAACCCCTTCAACAGAACACCTCAGGCCTCAGGAGGAAGTGCTCTCAGAGGGATTTGTGCATGTTTGAGTGTGCCTTCACATCCTGGTGCAAATCATATGTACCCAATAACTCTGACTTTGTCACAACACCTTACCATCACCATGCCAGCAATGGCTTCCACACAAAACAAAAAGCCTGGTAACCAGAGACTGTTGGTGGCTCCAGGTGGTTAGATATTTGTGAAATGTGATCACCTCTCAGTCATGTATGAGGGCTAATGAGTAGCTAATAAGGACTCCTAAATCCCTGTACCCAAGTCTTAAAGGAGAGACTCACGGTTAATGGTACCACCTTGACCTGGAACTTCAGAAAGAATTTTCACGAGCATTGTTCATTGGCTGGAAGGGTGCCACCTGAAGTCTTGGGAGCATCTGTCCTTGTCTCTGCCTCCATATGCACCTGGGCATTTCATTACCAGTCCCCTCACTAGACTATAGCACTAGGATGCTAGGGGAGGGGGAGTGTATTTTACCATCCTGTAGAGGATGGAGCCGATAAGCTGCCAGTGAATGAAAGGCCTCAGAAAGCAACCCAAAGCAACAGACAACACAAGAGTTGTCTTCGATCCAGTGACATCGGCTGGTGTCTCCTGGATGCTTTGTGCTAACCTGGGACTGCCTGACTTCCTTTAGCCTGGCCCCTTGCTACTACCTTGAACTGATTGTCTAACCTCTCTCTGTGTTTACTGCTGCCACTTACCTGCTGCAGGATTTGACAGCCTTCCTGCCTGGTTGCTGAGACTCCATTTTACCTCCATGGCATGGAGAAGAAAGAGGCAGGCTTCTGGGAGCATGTGTTTCAACACAGTCTCCAACAGTTTGAGCAGTAGCAAACGATATGGTTTGTCAATTGATCTTCAAGCTGCAGAGGGCCTAGAAATGGGCTATTGTCTGCAGCCCCAGCATGTGCACACGGACATTGCCATCGCTGCAAGCGGAAGTCTGGAGATGTGACGACAACGATCATGAGGGAGCATGGTGGTGTACCTTGTGGACTCCTGAATTGATCCAGTCATCATCCACCACAGACATCTAACATCAGAATTCCAAGACTGGCAACAGAGAACGCTCTGCTGGAAAGACCTGGGCAGAAATGAAGAGAACCACCTGCAGAGATGAAGAGCCTGATGGGAACCATGCCACGCTTTCGTCTTAAAGAAAGAAGGTGCATCAGTTAGGATTGAGAGTTCTTTGTTGTTTCAGATTGTAGAAAGCTATCAAAGTGGTCTGTGGAAACTTTGCTTGTTTTTTTTTTTTTCTTTGTGTAACGATTTACTTGGGGATATATATAATCATAAGTATTTTGGGGGGGGACTATTAAGTAATCTTAAGTGGGTGGGATTAGTTAAAAAGCATGATACTATTAGATACCGCTATAAGTAAACATGTGCACCTCCTTGTGATTCTTTCCTCTATAATTGCTACCCCTAAAGATTTCAGATAAACTTGAAGGGAACTGCAGGGAGATCAACCTTTTGGGGGCTGTTGGACACGGATAGAAATTAGTGGGAGAAAGTTCAGGGATGATTGGATAAAAATAATCTAATAGAGGCTCTTTGCCCTGAGGATTAACTCCGGGGATTGAGATTGTAAGCAGTCTTTAGAGAGTTAAGATAGATAGATGCCCTTTGAGAAATTGTTGCTGGAGTGATATTGATAACTATAGATGGTAAAGATTCATGGAAGTTACAGAAAAGTGATGAATAAGAACCGTTGGTTATGCCCCTGTCAGTGGCCCTTCTTCTTACCCCTGCCCCTTCTTCCTAACTCCGCACTGCCCACCTGCCCCTGCGCCACCTCCCTACCCTTGCCCATTTATTGCTATTTACTCTGTATTTCTCTCTATTTGCTAATGTATCAACTGATGTTATAATAAAAATTCAATAAAGATTTAGTGGTTAAGTGCA EMBV3_26550 CTCCCACCAGTGGCAAGCTGTTCTTGGGGATCTGGGTAATTGGCATGTCTGCGATTTCAT Gene GeneID:536517|TIAM1:NM_001078009:46_cdna Constitutive 0 NULL GeneID:536517 1 GENE TIAM1 MGC142564 T-cell lymphoma invasion and metastasis 1 EMBV3_18080 TGATCTCCATCATCTCTACCTCACGGATAACAACTTGGACCACATCCCTCTACCACTCCC Gene GeneID:281747|EPYC:NM_174307:20_cdna Constitutive 0 NULL GeneID:281747 5 GENE EPYC DSPG3 epiphycan EMBV3_00218 ATCCCACTGATATCACGGGCCCGCTCAACCTCTCAGATCCCTCGGTCAGCACCGTGGTGT Gene GeneID:100336579|LOC100336579:XM_002691702:53_cdna Constitutive 0 NULL GeneID:100336579 11 GENE LOC100336579 NULL N-methyl-D-aspartate receptor 1-like EMBV3_33390 GCTCATCAGACCCCAGAAAAGGTGTTGGTTGATATAGACAGCAGGACGGTGGCCATGGAA Gene GeneID:100337434|LOC100337434:XR_083937:260_cdna Constitutive 0 NULL GeneID:100337434 18 PSEUDO LOC100337434 NULL hypothetical LOC100337434 EMBV3_27695 CTTTTGGGTTCTGAGGGGGGTTTTGCCATGTTCGCCTGTATGACCAAGTCACCAAGGAAA Gene GeneID:506539|SIK3:XM_002693024:269_cdna Constitutive 2 NULL GeneID:506539 15 GENE SIK3 NULL SIK family kinase 3 EMBV3_24501 ATGACCAGGCCGGACCACGTGCAATAGGGTGGAAACCAAACTGCTCCATGCCGCATTATT Gene GeneID:767935|SERTAD3:NM_001077008:784_cdna Constitutive 0 NULL GeneID:767935 18 GENE SERTAD3 MGC128864 SERTA domain containing 3 EMBV3_00957 GAGCTCAGACCCCCCAACCCCTGTAATTCTACTTCTGATATCCCCTTTCTGGGACATTAG Gene GeneID:540637|LIMA1:XM_002687274:147_cdna UTR3_Alt 2 NULL GeneID:540637 5 GENE LIMA1 NULL LIM domain and actin binding 1 EMBV3_10137 AGGTGGGGAAGCTCCTGGGCACAGAGAAGGTGGACACCCCGGTGAACAGGAAGTCAATGC Variant GeneID:618084|QDPR:NM_001076492:20_cdna 278^592 2 EMBV3_40068 GeneID:618084 6 GENE QDPR MGC127076 quinoid dihydropteridine reductase EMBV3_23188 CTGGCCTGCTCCACTTACTTCTTTGGCCTTCGGGCTTCTCTCTCAGGATCTCTGATTATA Gene GeneID:534251|DEDD2:NM_001076017:319_cdna Constitutive 1 NULL GeneID:534251 18 GENE DEDD2 MGC140424 death effector domain containing 2 EMBV3_21453 TTCTGTTGGATGGTTGGCAACTAAGAATGGAGGAAGAACAACAAAGACATGTTCTCCACT Gene GeneID:282066|SEPP1:NM_174459:59_cdna Constitutive 0 NULL GeneID:282066 20 GENE SEPP1 MGC127167 SELP selenoprotein P, plasma, 1 EMBV3_20215 GCTTGTGTAGCCTGATGGCATGTCACCTCCAGCCTTTGATTAGTAAATTCCAGGCCAAGC Gene BVT0102_059067 - 0 NULL GK000017.2:5917603-5981167 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03287 TTTGTCCCTGATTTTATGATCACCACCCCAGCCACACACACGCTTGCTCCTTGGAAGTGC Gene BVT0101_021922 + 0 NULL GK000001.2:135951508-136057351 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12686 AAAGGAGATGCTTCTTCTTGAAAAAGAAGTATGCAAAGCCCAGAACAACGCCACCCAAAT Variant GeneID:513290|TMCO5B:NM_001075609:52_cdna 670^801 2 EMBV3_21300 GeneID:513290 10 GENE TMCO5B MGC134095 transmembrane and coiled-coil domains 5B EMBV3_31393 GGCCATACCCAAGCACCTGCACCTCCTGTTCTGTCTGTAGAATGAAGGTTATGATGGATG Gene GeneID:525716|S100B:NM_001034555:63_cdna UTR3_Alt 1 NULL GeneID:525716 1 GENE S100B MGC128275 S100 calcium binding protein B EMBV3_33031 GGCATTTCGATCCCTTCAGCCCTGTGAATGGGTCACACAGCAATGCTTCATACTGGGTCA Variant GeneID:540724|WDR70:NM_001076238:63_cdna 737^890 1 EMBV3_06671 GeneID:540724 20 GENE WDR70 MGC134424 WD repeat domain 70 EMBV3_23920 CCGGGCTCGATTGGCAGTTTAGAAAAAGAGCTGCTGTATCTTGGACGAGACTATCCAAAA Variant GeneID:783110|LYRM5:NM_001114860:52_cdna 309^396 1 EMBV3_26971 GeneID:783110 5 GENE LYRM5 MGC140631 LYR motif containing 5 EMBV3_18912 TTGCACATGGCTTGTGTTTCTGTGGAGAGATGCCTCCTCCAGCTGTAAAGTCAGCAACCT Gene GeneID:517953|RPS6KA2:XM_002690388:6_cdna Constitutive 0 NULL GeneID:517953 9 GENE RPS6KA2 NULL ribosomal protein S6 kinase, 90kDa, polypeptide 2 EMBV3_26997 GGCAGACGGTGGTGTCTTCCGGGTGGACAGAAATGGACTCAGAAATCAAGGAAGAAATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33239 GCTCCAGTGAGCCCCTGCACATGGCTCTGAAAATCTCTGAGTGAACTTCTGTCATGCTAA Gene BVV0102_081337 - 1 EMBV3_18787 GK000022.2:17096798-17129451 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128206 TCONS_00128207 TCONS_00128204 TCONS_00128202 TCONS_00128203 TCONS_00128205 1 XLOC_077845 NonCoding TCONS_00128203 XLOC_077845 NonCoding NonCoding - 22:17124746-17129333 - TSS95714 1335 3 TCONS_00128203_3 55 0.6 4 0.709768861753162 0 2.31477639226852e-35 2.98807567058584e-10 1.12091104537822e-47 2.57505364163278e-33 0 1.7747888963601e-09 0 5.4930797696263e-05 0 0 0 7.3507201861974e-06 0.0017946380889343 1.04087584453026e-09 1.73206734438156e-08 0 0 7.66458561761004e-05 5.33091804141531e-15 1.09058037163386e-13 3.16865590362549e-09 3.62463402778855e-09 5.53390842360217e-09 4.59011034135861e-17 0 1.49932503308882e-185 4.04026502860012e-09 0 2.59252704391902e-09 XR_229383.1 LOC101907007 PREDICTED: Bos taurus uncharacterized LOC101907007 (LOC101907007), 0.0 2316 100.00 0.961048689138577 XR_243060.1 LOC101927437 PREDICTED: Homo sapiens uncharacterized LOC101927437 (LOC101927437), misc_RNA. 3e-09 68.0 82.09 0.049438202247191 0 noncoding 1 0 1 1 -0.737159316279487 0.113799956515644 -0.0150296758252686 0.814410739113488 GTGTTCTGGCAGTCCAGTCAGGGAGCTGGGCGTTGAAAGTTCCCAGAGGCTCCTAGGAAACCGCCAACACCTCTGGGAGAGGGAACCCCCTCGCAAAACTGTTAACAGCCACTTCCGCGGTGGGGATTCGTTGGCCGCCAGTGCATTAGGAGTTAGGCCTGGAGAGCAGGACCCAGGATGGAGAACAGAGGCCAAGAGGAGGATTGACTTATACGAAAAGGAAGCAGATGGAGTAGAATAAGCATGACAGAAGTTCACTCAGAGATTTTCAGAGCCATGTGCAGGGGCTCACTGGAGCTGGAGTCTTGAATGAGTCACTTCAACTTTTGGAATCTCAGTGGTTTCATGAATGATTAAATAATGTGCTTTATACTTGAAGCAAGCTAGAAGTGTAAAGAATTGTTCATTCAATTATAAAATGCTTTCATAGCTGTACTGTGTCTCTCCTAGGAAGTACGTGTTTTCTTCAGGACTCTTGGGTTGCAAATGACAGAGACCCAGTAAAAACTGGCATAAGCAGGAATAGGTTCCAGCATAATCCAGCAGTTCATGTGATGGGAATCATATCTCCCCATGAACCCTGCTTTCCCTTCTGTGGTTAGGTCCATGCCCAGGCAAGATATTCCTAAGCCATGGCAAGATATGTCCGTTGTCTTTGTGATCAGAGAATATGGTCTCTGTGAAACTCAGACTTTGGAATTTGTGGAAGATCCATTTGAGGCCTAGTACATGGTTCATTTTCATAAATGTGCTTGCAAAGAATGTGATTTCCTTGTTAATGGAAGGAAGTTCTTTCTATGTCTGTTAGCTCAAGCCTATTAATTGCATTGTTCACATTTTCTAGATCATTACTCTTTTTTTTCCTGTCTACTTGATCCATTCATTTCTAGAAAAATATGTTACGATTGACTATGAAGGGAGATGAGAAAATTTTATGGATTGATGGTAATGTTCTGTGTCTTACCTGGAGTTTAGCTTACACAGATATATACATTTGTCAAAATTCAGCAAACATGCACTTAAGATTTGTGTGTTTCATTGGATATAAAATTCATTACAAATGAAAAAATTGCAATCAGATAATCAACCTTACTTAATGAAGTCTTTGAAAAGTGACTGAATTTACTTTGAAATGCATACAAAATAAGATGGTGTAATAAATGGATAGAAAGGTGCAGAGGTTGATATGTGAAGAAGCAAATGCAGAGTAAAAGTGTTATTGGTAGAACTAGACGGTAAGCATTTGGATGTATGCTCTAAGATTCTTCTAGCTTGTGGTACATTTGAAATTTTTCATTAAAAAATATTGAGGAGGAAAATCTGCCATTATGATTG TCONS_00126344 TCONS_00126345 r 5' 3591 TCONS_00126344 TCONS_00126345 r 5' 119 EMBV3_34934 CTGTGAGGTACCTAGAATATCACTACTGAGAGAAACACAAAAATGTGAGGTAAGCCTACC Gene BVT0102_073751 + 0 NULL GK000009.2:41256990-41263130 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235272 TCONS_00235274 1 XLOC_144199 Coding TCONS_00235274 XLOC_144199 Coding Coding CD164 9:41246267-41258965 j TSS176399 3138 1 TCONS_00235274_1 186 5 0.753248798928881 0.00194903803281847 0.00246266499606927 0.00122510082679796 0.00175442270999087 0.00242378379283749 0.0006495534365724 0.00208884325370609 0.00231713085954833 0.0050786176501788 0.00157903186167658 0.000516347915836066 0.000339976675113508 0.00033497419069801 0.000859522734717341 0.00144704075074374 0.0118358165256626 0.00482036834517432 0.0102031921186923 0.0019562720212595 0.00161810028666652 0.000813293841473403 0.00465448400704449 0.00298186197883376 0.0104869681396544 0.00159237897833085 0.0010564282699696 0.00211075543805106 0.000876045927244171 0.000627885473474441 0.000824236372723293 XM_005210777.1 CD164 PREDICTED: Bos taurus CD164 molecule, sialomucin (CD164), 0.0 5407 100.00 0.955066921606119 NM_001142401.1 CD164 Homo sapiens CD164 molecule, sialomucin (CD164), transcript variant 0.0 2334 76.84 0.957934990439771 TCONS_00235274_1 sp|Q2YDH0|MUC24_BOVIN MUC24_BOVIN Sialomucin core protein 24; 7e-93 273 93.94 0.994623655913978 1 coding 0 0 0 0 -1.98454697644171 0.0264442135487181 0.0133637225637263 0.788688111072797 GGCGCGATCCCGCTGGGGGAGTGGAGTCTCGGAGGCGACGCTGCAGTGGACAGAGGGACGGACGCAGCCAGGTTGTCCCAGCTTTCGCTCTAGCGCCAGCGCGGAGGACGCGATGTCTGGGCTGTCTCGCCCGCTGCTTTTGGCCGTCGGCTGCCTGGCCGCGCTCTGCGTAATCACAGCGGCTGGGAACACCACCCTGGCCCCGAACGTGACTACAGCCTCGTCTCCACCGCCCACCACCACGACAGTCCCGGTGTCACCGACGACTCTCTCGCCGCTGCCGGTCACCACTCCAGCACCAGATATCTGTGGAAGCCGAAACAGTTGTGTTTCCTGTGTTGATGGTAATGCTACCTGCTTTTGGATAGAATGTAAAGGTAAAAGCTACTGTTCAGATAATTCAACAGCTGGTGATTGCAAGGTGGTGAACACCACAGGATTCTGTTCTGCTAAAACCACAACTCTGCCTTCCACTACTACAACTTCCACCACAGCTACTACATCAGGTACAACTAATACCACTCTATCTCCAACTATACAACCTACGCGGAAGTCTACCTTTGATGCAGCCAGTTTCATTGGAGGAATTGTCCTTGTCTTGGGTGTGCAGGCTGTAATTTTCTTTCTCTATAAATTCTGCAAATCTAAAGAACGAAACTACCACACTCTGTAAAGAGACCCACTAAATTAACAAGGACTGGCGTGTAACTCACTGAAACCAAAATATTATCTTTCAAGATGTCCCACATGGAAGACGCTATTCTAGGATCTTTAATTTTTCAAAGGATGCATATAGGAGCATCACCCTTGAAGAAGAATCAGTTCAGTCACTTTGCTCAACGGGCCTATTTAAAGTACGCTGCATGAGTCCTTGTGGCTGTCTTTCATTTTACATGGCTGCTGCTGTGGGATTGTGTTCTCTCTGCTTGACATGCCAAATGTAACTTTAAGTGATGGAAAACATTGTCCTGCGCAGACAACCTCATGACTCTTTTGGCAATTTAAATGTAATCATTTTAAGCCTGAAAGCTGCATTATTTTCATCCTAACTCAGGATGTAGTTTAGTGACCAGAATTGAGAAGAATGTGCCAAATGAGCATCAGTCAGGTGGATTTTTGGCTATCGTTTCAAAAGTGGAATAAATTTATAAATTTAGTACCCTTAGAGTAAAATTTTGTGCTTGATAACAGTTATTTTTTTCTACATTAGAAAAAAAGATGCCACACAGGGAATTACATTCCAGATTTAAAGAAATGAGAGGATACACAACATGAAAAGTATAGCAGGTTATTGTTCATACTTGTAAAGCACCTTATATCATTGAGAAATAAAGAACAGTGCCTTAAAAGACAGACTGAAAGGTAGACTGTAACTTAAAAATGTTGGTGATTTGTTCTTTTACGTTAATGAAGGGAAAAGTTGGTTTGAGGATGTAACTGTTGATGTGAGCAGTAGTAAACCTGCTTTTAGATACCATACTATTAGTATTTAATTGAAAACTTAGCTACTTTATTTCAAGCCTGAGTGACTTAAATGATGTTCTACAGAGTCGAAAGCCTTCATCTATTGGACCTCCCACCGTTTTTCTTACGGCTGTTAAAAAGTATAAAGATAAAGTTGATTTAATTGTGTTTTCCTTTGTACTTCAAAAAAGTATCCTAACACTGTTGTACCTTAAAAAGATTTCCACTGAGCTTTTTTGAAAAGTAACTTCTATAAGACAAGGAAGAAATAAGTTGTTTTACAATCATTTACTAACTCTTTAAATGAGACAGTCATTTTAAGTTTTGAAATAGCAAATGTGAGCAGTATAATTTCAGAAAAAATTTAGTTGATCAGATGACTAAATTTTTATTGATAATTGCCCTGGATAAACAGATTGAACTTTTTGTTTCTCCTCTCCCAGGCTTTCTTCTTAGTTTCAATTCCTGTTGTAGGAAAAGCATGTGTACTTTTTATTTTTTAGTTTCCTCATGAAGCACTAGTTTTTTTTCAGGTTGAGGGATATTTCTTCCCTGCCTTTGACACATTGGATTAGTTCAGGGGCTTAAATCAGTTTAAAATGAACTTTTGCTTTTCTAGGTCATTAAGATGTTTTGTTTTAGTTTCTTTAGCCTGTAGGGGCCGATTTTAGTACTGGTTTTCAATATTTTATAGTACAAGACAAGTTGCTTTGGTCCATTTCATAAGCCAGAATTCCTTATATTTAGATAATTAAAGGTTCTTAAAGTGAAGATTTACTGTTTCTTTGTTACTTGCTGGTACAGCTAAAGTTTGTTTTACTTGCACATTTGTACATATACCTAATGTTTTCAAGTGCCTTAATTGTTTAAAATCTCTGGCTTCAAAGGTTTTTGGGAAAAGGTAGGCTTACCTCACATTTTTGTGTTTCTCTCAGTAGTGATATTCTAGGTACCTCACAAAAATTTTTATTATGGTGCCATGGCTGTTAGCTTTTAGTAATTGCTTTAAGTACAAAATTCAGTTGAAAATACACAGAATTTCCATTCTCCCAAAGGGGTAAAAATTAGCTACAATGGTGTAATTGTCATTTACTTAGATACGAATACCTTGCCACACATTAATGTTAACGCTATAGCTATTTCTGTGAAAATGTAGCTGACGAAGCCTCTCATCTTCTGTAGTTTTGAATACTGCTCTAACAGAATCATAATATGGAATTAGATTTTACAAGAAGAGCTCTTAAAGTGAACTCACAGCCTTTTCCCCTCTTGAGCAGTTTAGTATCTTGAGCCATTAATGATTTGGTTTTTTTTTTTTTTTTTAATCCAGAAAGTATACAGAAACATTTTCAGATTTTTCACCTGATTTGTTCATGCAGATTGTAGTTCTATTAAAATCCCATATCTTACCTTATGGATAATTGTTGCACAGGCAGACACTGCTGTATTTAGAAATTTCTATTTCAGTTCATTAAAAACTGCAAAACCAATCTGTATCATGTACCAAACCAATCTAAAATAAATCTACATGTTTATTGGGTTAATCTGCTTTTTTTTTATTAACTGAAGTGTGTGTGTATATTTTGACTATGGAATTTAATGCTAGTGAATTTACCTTAGTCTTGTTGGGAATGGCTTGTCTACTCAGTGTTTCATTGCTCCTCGAGACCAGCA EMBV3_12554 GTGTCATGTAAATGTAAACTGTTCTATGTGACTGAGTGCAACTTTTGGAATGGTAGCTGA Gene GeneID:532960|KLHL8:XM_002688407:85_cdna Constitutive 0 NULL GeneID:532960 6 GENE KLHL8 NULL kelch-like 8 (Drosophila) EMBV3_13169 TCTAATACTTGAGCAGTTGCTGTCTGACTGGCTTCCAAATATGCCAAGAGTTAAGCATTC Gene GeneID:768210|RELL1:NM_001078098:44_cdna UTR3_Alt 2 NULL GeneID:768210 6 GENE RELL1 MGC143350 RELT-like 1 EMBV3_40344 CCTGCTGCGAGGAACAGTCCATGAGAAACTCAAGTGGGCCTTTAACCTCTACGACATTAA Gene GeneID:513316|KCNIP3:NM_001075612:56_cdna Constitutive 0 NULL GeneID:513316 11 GENE KCNIP3 MGC140673 Kv channel interacting protein 3, calsenilin EMBV3_30800 AGCTTGACCCTGACCTTCCTCTTTAGTAGAGCAATGGGAAAGAAATGGCCTCCTTCCTGG Gene GeneID:539784|PSMD2:XM_002684875:78_cdna UTR3_Alt 2 NULL GeneID:539784 1 GENE PSMD2 NULL proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 EMBV3_06085 TTTCCACTCCCACCCCCAATCCCAGTGGACAAGGAGAGTTTGAGAGAAACTTCTGCACCA Gene BVV0102_052942 + 0 NULL GK000008.2:54529789-54950710 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225394 TCONS_00225391 TCONS_00225382 TCONS_00225385 TCONS_00225392 TCONS_00225390 TCONS_00225383 TCONS_00225384 TCONS_00225386 TCONS_00225393 TCONS_00225396 TCONS_00225395 TCONS_00225388 TCONS_00225387 TCONS_00225397 TCONS_00225389 1 XLOC_137734 Coding TCONS_00225382 XLOC_137734 NonCoding Coding - 8:54549017-54699328 - TSS168753 1371 6 TCONS_00225382_4 47 0.0408460977388767 6 0.990918767879715 0.000748150210934242 0.00143824743585816 0.0013826261308525 0.00186209646641239 0.00103187891112609 8.58050746059296e-05 6.13848140958945e-98 0.000497200379193588 0.001444665811397 0 6.39336064428433e-52 0 1.56882641616186e-05 2.9433133158619e-84 0.000155257810892522 0 0 0 0.00270782317293123 0.00161924342519743 0.00099303014905612 0 0 0 0.00161476373875845 0.0007196707967067 0.000791532524757521 0 0 0 0 noncoding GATAAGAAACACTTGGATCATTTGTTAAAGCGGTGATTTCCGGGGCCATCTTGGAACCGCTGAAGAAGAATCTCGAGGGTAGAGGCTTTGGGAAGGTAGAGCTAACGAGTTTCCCAGGTGATTCTGATCACCAGGTCTCAGGTGTGCCTGCCTACCAGGCAAGGAAAGAGGCTTTACAGAAGCGGGGCTTGGGCGGAGGCGCGCTGCCTTCGAGAGCGCGGATCCGGCGTTCCACCAGATTTTGGTTTTTGCATGGGTCCCGAGTAAGTGTCTTCCCCAGCTGAAAGAATGCACTGTCCCCAGGCCCCCACGAAAGGCACTCCTGCAAGGAAAGCAGAACAACAGCCGGTGGATATTGTATAGGAAACGGAGCCTCCTGCACTACTTTCCACTCCCACCCCCAATCCCAGTGGACAAGGAGAGTTTGAGAAAAACTTCTGCACCATAAAAATGCAGTTTTCCTAGGATCAGGATGAATTGTGTACCTCCAACACTGGAGAGGGTGTGCCTCCAGGGCTGAATCTGTGCCTTACTGATCTGAGAATGTCTCACTCACACAAGAACACTCAGCAGGGTGCCTCGCCCACTGGATGAGCTAAACCACATTCTTGCCCTTGGCACTGACGTTTGTGCATAAAGTACAGTTCCTGCCCTCAAGAAGCTTGCCATCTGTTACAGGATGATAAAGCTAAAACACACGGACTGCTTGAGAGAAGAGAGAACTCCGTGGAAACTTGCACTGTCAAGAAATGCTCTCTGGAGGAGGAAGAGCTTTTGGACGGTTTGGATGAGCTAATCTCAAAGCATATAAACATATTTCTGGAAGATGGACAGTGCTGATTTGCGACTCTTAGTACAGATACAATTTATGTACGATGAGATGCACAAGTCTTAAGAGTACAGTTGGATGGGTTTTGTTAAATTTGTCATAGGGATGTTTATTATGAACCAAACTTTGGAAACTTCAGATGTCTTGCCTGTGTAAGTCATACACTGAGAGTGACCAAACAGGCAGATTAGACTTCAGAATACAGACATCAAGATGGCCTGCTGTTGGCTATGCGTGTTCCAGCTGGGCTCACCGGGAATACTGTCTCGATTTCTGACATCGCGGCAGGAGACTTTGGGAGAATTGTCAGTGCGTGTAATAAGAAGAGTGTGTGGATATTTTCAATGCTGTGAATAAAGAGGACTCAAGTCAAGTCGTGCTGAGTGTGTTCCAGAGAGTTTGCTGGTTTCTGGAGGTGGATGCAGAGATGCTACATAGATACTCTGAATGGTCAGGCCTTATTACAGGCTTCAAAAATGCATTCTTATTCTTTTATTTTTTTCACTGTGATATTGAAAAGGCAAATTAAATGGGTACTTTTT TCONS_00225376 TCONS_00225378 TCONS_00225379 TCONS_00225380 TCONS_00225381 s 3' 19151 TCONS_00225376 TCONS_00225378 TCONS_00225379 TCONS_00225380 TCONS_00225381 s 3' 19151 EMBV3_17263 ACTTAAAATACTCGGGTTTCGCTGGTGGCACTGTGGATTCGAGTTTGCCTGCCAATGCAG Gene GeneID:100336181|LOC100336181:XM_002695864:344_cdna Constitutive 0 NULL GeneID:100336181 19 GENE LOC100336181 NULL hypothetical protein LOC100336181 EMBV3_00466 AGCTTTTCTCGAGTAGCTGATATGTTTCCTGCGGAAGCCCTGAGACATTCCATCTGAGGC Gene BVT0102_055188 + 0 NULL GK000022.2:54003909-54041051 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127436 TCONS_00127438 TCONS_00127434 TCONS_00127435 1 XLOC_077652 Coding TCONS_00127438 XLOC_077652 NonCoding Coding FYCO1 22:54016209-54030235 j TSS95323 4206 1 TCONS_00127438_3 144 3 0.700320855614973 0.000435264605172466 0.000244846317134198 0.000260142610545914 0.000597838818626986 0.000141990659077477 5.47567433371267e-06 3.89392510697922e-05 5.61548902198229e-05 0.000538677630551696 0.000305026554267583 6.80213782717559e-05 9.54427606590513e-05 2.20718235849397e-06 9.59439721289425e-05 5.0761143478076e-05 0.00329346151174282 0.00131290405471284 0.00131533931764275 0.000257830168553234 0.000213055295952391 0.000360736172487474 0.00186156703485797 0.00124110288572504 0.000760491459808312 0.000356187898997673 0.000183615635379206 0.000262725949247759 0.000445652465869909 0.000209697212624926 0.000105731293437378 XM_002697098.3 FYCO1 PREDICTED: Bos taurus FYVE and coiled-coil domain containing 1 (FYCO1), transcript variant X1, mRNA. 0.0 7036 100.00 0.927246790299572 XM_005265483.1 FYCO1 PREDICTED: Homo sapiens FYVE and coiled-coil domain containing 1 (FYCO1), transcript variant X1, mRNA. 9e-174 616 66.59 0.543984783642416 0 noncoding 0 0 1 1 -0.0158869270675408 0.918574255107139 -0.0209818945383369 0.737428307978279 ACTGCGTCTGCCCAGATTAGACACAGGTGCTCATTCCCACCACCCGCTGCAATTCCCACAAGGAGAACATCCAGGGCCAGCTCAAGGTCCGCACACCAGGCATCTACCTGCTCATCTTCGACAACACTTTTTCCAGATTCGTCTCCAAGAAAGTCTTTTATCACTTAACTGTTGACCGGCCTGTGATCTACGATGGAAGTGATTTCCCGTAACCTCAAGTACCTGGATTTTGCTAGTTTCACATTACCCACAGGAAACACTACTCCTCCTCACTTGTCACGTAAAGCACCTAAAAAACCCAGAAAACAAAAAATAGCTGCTCTAAAGCTATCAGTATCCACTATGCAACTTTAGGAGACGGGCCCTTGGCTGCTCGTCAGAGCCGCGTTGCTCCGAGCGCCGTGTACTCGGCGCTGTGCACATCACTCTTAGCCCCGTGGCTCGTAAGGGCTCAAGTGATGTTTTCCATTGTCCTCACACCCAGAGGGACACTATGCCAAAGGTTTAAACACTCAGGAGACCATTGGCCTCTCCAGGGGGGTGCAGTTGGCTCCAGGCCTCCTGTGAAGAGTTTCCCAGGTCAGAGGGGTCCCGACTTCCACCCGTGGAGAGACACAGCCCCCCTGTGCCCAGCCAGGCATCACGGGTGACCATGAGCTGGAAGGCCTGGCCAGACCCTGTGGGGCCCTTGAGTCCTCCCTGGGAAAGGACATCAGGGCACCTAGGGCCCCGCCTGAGATCCCATCCAGCTTCCTCGATCATGCTCCTGTCCCCTCCTGCCCGGGGAGTGCAGGGCTGCTCAGAGGGGCCGCCAGCTGCACTTTTCTCCTGGCCCTTCTATCTGGGCGAGTCTGTCTTGGAGCAAAGCCCTCCACTCAGCTGGGCCTCTCAACAGCTCCAAAGTACCACCCTAAGAATCAGAAGTGAAGCTAATCCAGGAAACAGAACCCACCGACTGAGGGCCTGCAGTGCAGTCTACATCCAGAGGGCCAGAGCCCAGATGCTGGGTAACGTCCACGCCATGACCAAAAGGCTGGACGCGTCAGCCTGTGCGGCTCACTCCTCAGCCTGTCTTTGTTTGTATTAACAAGAGCTTCTGCAGATATGTTTACTAATGATTATATTCAGGGTAGGAACCACTTTTAAAAATCGGAGGCTTCTTAAGAGAAGTCTTTGCTAACTCAAGTATACACAGGCATAATTCATGAATCGGCTCTTTGCTCACCTCTCGGTCCCTCCTCCCCACCTGCCTGGGTTCCCTGCACCGCTTTTCCACTTCCTGCTGCTCAGCCTGCACCTGACACCTGGGAGCAAATGAATCCTCTGTCCTTTTCCGGGACAAGCAGCAGATGATCTTCCTGTTCTCTGTGGCCCTTTTCTCCCACCACAGAGTGCTCACCTGTGATGGCCTCTCTGTGCCCTGTTCACAGGGCAGTCAGGACCCAGGTCCTTCCGCAGTGAGCAGAGATCTGACCAAGCAGCCCACCTTAGCTGTGGTCAGGGGAGAGGGTACCTGGCAAGGCAACTGCAGGTCCTAGTACCCCGCCAGCCCTTCAGCTAGCCCGGTGACTAAGCCGAGTCACACCACGTTGAAGCTTCATCTCGTCATTCACGAGCCTGGTCTGACTGGTTTTGAGAACTGATGAATGGGTCAAGAATCCTTGGCCAAGTTCAGTTCAGACCCCATACCTCCCAGGCGCCAGCAGAGGTAGGAGGAAATGACTTTGGCAGTAGACTCAGAACTTCCATTTAAACAGGAGACATAGGCAGTTCCAGGCACTTTAAGTGGGGCTTGAGACACGGTGAACAGAACCTTCCAGAAAAGAGCTGGCCCTCTTGTGCTCTCTTTCCTGGGAGCAGCCGCCTATGGCAGAAAGCCAGGAGTCTCTAGCACCTCATTGAGCAAGGTCCTGACGGTGCTTAGCACCAAAACAGAAATGGCCAGGCCCTCAGAGACTTCCTGGACTCGTGCTTGTCCTTACAGGGTGCCACACTGCTTGAAAGCAAACTACCCTGCCTTTAAATCCATCTCCCCCTTGAAAAGGATAATCAGATGTAGCTGGCTCACCACTTGAGAGAAACAAAAGACCCTGAAGCATCTGGAATCTCAGTTTGAGTGCTTAGCTTTCCCAGGATACCCTGGAGACATGGCCAAGCAGACGGTCCTCTGCTCATGTCACCACCGTCACCTGCAGCTCGAATCAGCTTTTCTCGAGTAGCTGATATGTTTCCTGCGGAAGCCCTGAGACATTCCATCTGAGGCTTGTTCTGAACCTCTGTGACTCGACCCAGCAGGGGACCAACTGCAGCTTAAAAAAATCCCGTGGCTCTTGTGAAGCCAGCCCAGAGCCACTGCTGCAGGAGCTCGTGGGCCCCTTGTGCCAGCACTGCAGACGGTGATGGCAGTGGTGCAGAGGCCTTCGCCTGCCCACTGCGGCCCCACCCTGCCTCTGCAGCGTATTTAGTTTTTTGTGCTGAATGGACTCTTGTTCTTTGTTACTTTGCTGTGGGAGCTCGGGTTTGCTGTGCAGCTAGAGATCATCTTGGCATATTTAAGTATGGCTTCTATAAACTGCTTTCTTATTTTAAACAAGTTCCCAACTTTACTGAAGTTTGGGGGCTGAGGTATTCTTTTTAATGCAAACAATAATGAAAAACAGCTATTGAAAGTGGTGGCCCCGGCCAGTAGACTGAATTAACACTAAAAGTCAACAAGTAGGAAGCATTCTTGGGATCCCAGATCACTATCTAAAAAAAAAGAAAAAAAGTCCCCCATCAGCCTCTTTGGGGGCTGGCCAAGCTCTCTGAATAACTGTTGCTGTTTAGTACAAGATTAGTACCAGCCGCCTTGCTCACCACTGCCTTGGGAGCCACTGATCGCCCTCACCCAGGAACACGAGGCCTCTGTCAGGCACCCTCATCCACCGCCAGCAAGCATGTTTGGGAGAAAGCGTAGCCCCTGCAGAGCACTTCTGGCTGGAGCCCACCTACTCCACATCCACTGGATCAAGAGCAGGCAAGGAAATTCTCAAACAGGAATCTGGAACTGAAACACTACATAGGGTCTGAAAAGTATGAATGCACAGCCACGCTAGATAAATCAGAGATAAAGGAGATGGTTTTTTAAAATTATTTTCAGTTGTCACTCACCTTCGGTGGTGAAGCCATTCCAGACTCATCTGAAAAGAAATCCCCATTTGGAGATGAAATCTCAGTCTGTGTTTTATCATTGTGATTAGCTGTCGACCATACGTTTTTATAGGAGTTTCAGTTTTAGAAGCCCACCTTGGTGACTCCACCTTGGAGAATCCCAGCCTCAGCTCAGAGGTGTTGAGAATGAGAGCAGAGCCGCCCTCTGCAATGCTCAGAACCAAGGGTCACCTGGCACAGAGAATGTTTAGTCAGCCATCTGCGTTTACAAAACACTTACCCAAAAGGTTCTTTTCAGTGGAACCCTGGGTGAATTCTCTGTTGTGGTGCTTCCAAGGAAATAAAGACAGTTAATAATGCCTTTTCTCTCTTAAGCACTTTTTCAAAATAACACAGTACATCTTTAAATTTGGGGAGGCATTTCTGATAAAAAGACTTCCTCAGAACCTGAGGACAAGGGCTGTCCAGAGATGCTCCTGTTCCCCCATGGCTGCAGAGCAACAGTGAAGCCTCAGTTGGGTGGCTTCCAAATCAGAATTGCACTTTAATTGACCAATCCTCAATGCTCGCGGCCTTACAGGGTAGTGGGTCTGGGAACCCATCTCTTTTTTATCTGCCAAATAATTACCAGAAGCACATCAAATGCCAACTCTCCACCTGCCCAGTGGGGGTGAGCAACTTTTGTATCCCAAAACATAGTCCGTATAGCATCTGCTGCACCATTGGGAATGTCTTATTTTTAATCTCAGGATTTAAATAAACACTATGACATTGAGAGTGGCGTCGTCTTTCATTCCATTGAGACATAAGGTGAGAGAGGAAATTGCACACAGCAGAGTGGGGGCAAAGCTGTTGGGCCATGTCAAGTCCTGTGACTTCAAAAGGGAAGAAAAAAAGCAGCTGTTCTAAGAGGTTGCCAAATTGGCCTGGTGTCTGGACCCACAGTCTACGCTGAGGTCCGAGTTCAGACTTGCCTCAGCCAATGCAGTGCACCAACCCACTGCCCTCTGCCAGAAGAGCTTCTGCGTTCAGTGAAATTCCCCAGCCCTCCCCTGG EMBV3_09054 GCAACCCCTTGCTTTACAATGTCACCATGTCTTATCACATCTGCTTCCGCCTCACAGTGG Gene GeneID:532490|LOC532490:XM_002699136:230_cdna Constitutive 0 NULL GeneID:532490 29 GENE LOC532490 NULL similar to olfactory receptor, family 8, subfamily G, member 2 EMBV3_41596 CTGAAGTTCTGCTTCCACCATTTGAGCAAACCCCTGCAGATGAGGCTCTGGTAGAGAATG Gene GeneID:767821|FSCB:NM_001076546:324_cdna Constitutive 0 NULL GeneID:767821 21 GENE FSCB MGC133924 fibrous sheath CABYR binding protein EMBV3_39367 TGCCCGCCAGAAGTATGTCCGGAAAGCCTGGAAGAAAGCCAAGATGACAGACTTTGATCG Variant GeneID:539373|RPL14:NM_001034674:187_cdna 253^318 1 EMBV3_26787 GeneID:539373 22 GENE RPL14 MGC127119 ribosomal protein L14 EMBV3_09680 ATTTTAATAACGTGGTCCTTTTCCTAGTCCCTGCAGCCTGTTTCGTAAAGTGCAGTGGGG Gene GeneID:508899|NCOA6:XM_002692445:461_cdna Constitutive 0 NULL GeneID:508899 13 GENE NCOA6 NULL nuclear receptor coactivator 6 EMBV3_08078 CAAATACCGCCTTCATCTGATCCCCTCGCTGCCTCTGCCAGACCCCATAAAAAAGTTTCT Gene GeneID:617358|ASB1:XM_002686580:40_cdna Constitutive 0 NULL GeneID:617358 3 GENE ASB1 NULL ankyrin repeat and SOCS box-containing 1 EMBV3_00851 TTTGAAGCTGCCGGTGGTTCTCATTGTGCTCTGTGTTGCGTTAAACCATCTGGAAGGTGG Gene GeneID:100138011|IAPP:XM_002687741:80_cdna Constitutive 0 NULL GeneID:100138011 5 GENE IAPP NULL Islet amyloid polypeptide EMBV3_10151 CTCCACCTTGCGGGGGGAGGCAGCAAATGTCAGAGGGAAACTAAGTCTCAAAGAGTGAGT Gene BVT0102_179399 + 1 EMBV3_34180 GK000024.2:46862096-46885278 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32527 GGTTGGGCCGCTGCGCGTTCACAGGTTTCTTGATGTGTGTCTTACAGTGGCTGTGTTTTA Gene GeneID:614321|VPS26B:XM_002693819:77_cdna Constitutive 0 NULL GeneID:614321 15 GENE VPS26B NULL vacuolar protein sorting 26 homolog B (S. pombe) EMBV3_16387 CTTCCGGTTCTGCTTCCTGACTGTGCCCGGATGTTCTCATTCCAGGAGCTCTTTTCCAAA Gene GeneID:781602|LOC781602:XM_002695187:855_cdna Constitutive 0 NULL GeneID:781602 18 GENE LOC781602 NULL similar to tetra-peptide repeat homeobox 1 EMBV3_05052 GAGCACAGAAGATAGCAGAAATCGTATGGATCAGTATGTCCCAAGTCATACAGTTCTCGG Gene BVV0101_062742 + 1 EMBV3_04463 GK000006.2:83643974-84904059 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07973 ATAGTTGACAAAATCCACTCAGCATGGGGCATACCATGTCACAGCACCCAGTACAACGTT Gene BVT0102_177318 - 1 EMBV3_23213 GK000006.2:60984422-61034008 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205247 TCONS_00205243 TCONS_00205248 TCONS_00205250 TCONS_00205245 TCONS_00205249 TCONS_00205246 TCONS_00205244 1 XLOC_124616 Coding TCONS_00205243 XLOC_124616 Coding Coding RBM47 6:61031592-61120096 j TSS153319 6612 1 TCONS_00205243_3 522 0.0539927404718693 4 0.925335864320983 6.13583903258677e-14 6.50790548909237e-26 2.21491651483368e-13 1.49483002906305e-11 3.12430059776005e-11 1.28283162240098e-11 1.29657027625166e-26 5.54405434252233e-79 2.80015116691658e-11 0.000591568112111134 3.64591533827149e-06 1.83258792870803e-06 1.61355788835675e-24 2.09429781228669e-62 5.9572066197126e-12 1.72457584473586e-37 3.98674508618917e-05 0.00592983733624363 5.57700399718083e-11 7.93812397534224e-05 1.88671141742483e-26 2.31534146421817e-10 1.81518852650627e-16 5.82559562268809e-05 3.03218405138606e-13 8.30775692129542e-26 2.83860108632849e-26 7.49676884159619e-25 2.25357382007012e-64 1.03350236020716e-29 XM_005207891.1 RBM47 PREDICTED: Bos taurus RNA binding motif protein 47 (RBM47), 0.0 7492 100.00 0.628100423472474 NM_019027.3 RBM47 Homo sapiens RNA binding motif protein 47 (RBM47), transcript 0.0 4226 84.68 0.571082879612825 TCONS_00205243_3 sp|Q91WT8|RBM47_MOUSE RBM47_MOUSE RNA-binding protein 47; 0.0 739 71.84 0.998084291187739 3 coding 0 0 0 0 -0.0171994618655198 0.869859042704024 0.00494826141480464 0.920706312036105 CCAGCAGGGGAAAGGGAGCTCCAGGTGTGTGGCAGGTCTCCACCGGCCGTGGATGCCTTTGACATTATGACCGCAGAGGATTCCACCGCAGCCATGAGCAGCGACTCCGCCACAGGGTCCTCTGCCAAGGTGCCCGAGGGCGTGGCGGGCGCGCCCAATGAGGCGGCGCTGCTGGCGCTGATGGAGCGCACGGGCTACAGCATGGTGCAGGAGAATGGGCAGCGCAAGTACGGTGGCCCGCCGCCCGGCTGGGAGGGCCCACACCCGCAGCGCGGCTGCGAGGTCTTCGTGGGCAAGATCCCCCGCGATGTGTACGAGGACGAGCTGGTGCCAGTGTTCGAGACGGTGGGCCGCATCTACGAGCTGCGCCTCATGATGGACTTCGATGGCAAGAACCGCGGCTACGCCTTCGTCATGTACTGCCACAAGAACGAGGCCAAGCGCGCCGTGCGCGAGCTCAACAACTATGAGATCCGCCCCGGACGCCTGCTGGGCGTGTGCTGCAGCGTCGACAACTGCCGCCTCTTCATCGGGGGCATCCCCAAGATGAAGAAGCGCGAGGAGATCCTGGAGGAGATCGCCAAGGTCACAGAGGGCGTGCTCGACGTGATCGTCTACGCCAGCGCGGCCGACAAGATGAAGAATCGCGGCTTCGCCTTCGTGGAGTACGAGAGCCACCGCGCCGCCGCCATGGCGCGCCGCAAGCTCATGCCCGGCCGCATCCAGCTGTGGGGCCACCAGATCGCTGTGGACTGGGCCGAGCCCGAGATCGACGTGGACGAGGATGTGATGGAGACCGTGAAGATCCTCTACGTGCGGAACCTCATGATCGAGACCACCGAGGACACCATCAAGAAGAGCTTCGGCCAGTTCAACCCGGGCTGCGTGGAGCGCGTCAAGAAGATCCGCGACTACGCCTTCGTGCACTTCGCCAGCCGCGAGGACGCCGTGCACGCCATGAACAACCTCAACGGCACCGAGCTGGAGGGCTCGTGCCTCGAGGTGACGCTGGCCAAGCCCGTGGACAAGGAGCAGTACTCCCGCTACCAGAAGGCAGCCAAGGGTGGCGGCGCAGCCGAGGCAGCAGTGGTGCAGCAGCCCAGCTACGTGTATTCCTGTGACCCCTACACGCTAGCCTACTATGGCTACCCCTACAACGCGCTCATCGGGCCCAACAGGGACTACTTCGTGAAAGTGGCCATCCCTGCCATCGGCGCCCAATATTCCATGTTTCAGGCAGCTCCGGCCCCTAAAATGATTGAAGATGGTAAAATCCACACAATGGAGCACATGATCAGCCCCATCGCTGTGCAGCCCGACCCAGCCAGTGCTGCTGCGGCCGCCGCAGCCGCCGCTGCCGTCATCCCTGCCGTGTCCACGCCACCGCCTTTCCAGGGTCGCCCAATAACTCCAGTGTACACGGTGGCTCCAAATGTTCAGAGAATTCCCACTGCCGGGATCTACGGAGCCAGTTATGTGCCATTTGCTGCTCCAGCCACAGCCACGATCGCCACACTACAGAAGAATGCAGCGGCCGCCGCTGCCATGTACGGCGGATACGCAGGCTACATACCTCAGGCCTTCCCCGCCGCTGCTATCCAGGTGCCCATCCACGACGTGTACCAGACCTACTGAGACCCGCCGCCGCCACTGAAGGAACACTTTACTATTTATGAAGAAAGACCGTGTTCGGTTAGCACACACGAAACCTGAACGCAAAGAATGTTATCAAATACCATACTGGAATATTTTATATTACATGAAGTTTTCACTAGTTTTTTAAGACTGTTTTCAATTTAGCAGACCTGTGTTCATACATTTCTAAGAGACTTGCAATGGTTTGTGCCTTAAACACCATCTCTTAAAAATTTGTATGTGGTAGTACATTTGTATAGAGGTTTTTGTTTTTGTATTTTTAAGGATATATTTTCAGTTATGAAGGTTATTTTCTTAACTTCTGCACTCCAGAGATTTCTATTTTGTAGTACCTTCAATAATATATCAAGTATATATTAAAAAAGCACACTTGAGCAGCTAGGGAACTATTTTGAAAAATATATTCAATATTTAAAGATACAAACAATAGTGCTTTAAAAATACTACAGAAAACATTATTTTAAAAGTTATACTGGAAAGTGCAATTATAAAATGAGTGAAACCTCTATTCTGCTGGAATTAAGGGTTGACGGGTGTTAACCACGTGTTATTCATGATGGTTCTGTTCTTTAAACGCTCGACCTCTCCTTAAGGCCAATGTTGAAAAGACTTGTCACACTTCTGAGTCCAAACACTGGAAGGCGCTGTCACCTGCTGCCCTCGTCCTGGGCCCCTACTCATTGTCCACGAGCCTTTGCTCTTAGATGTGTCCCCTCCGCCGCCCACCACTACCCTCCACTCACCCTCGCCCGCCCCCAACCTTCCCCAGACCCACCTTCATATTTGGCAAGTCAAGGACAAATTAATTACTCTGACAGAGAACATTGATGGCTTTTATACTTCTTTTTGTTAGGGTTTTTTGTTTTGTATGGGTTTTTGTTTAGGGAGGGTTGTGGTTTGGTTGGGGAGCTATTTTCAATAGCAGAGTATGTGTAAGCACAAGATTTTAATAGTTTGCATAAGGCATCTTTGCATAGCTATTTAATTGTCCAATATGAAACCTTCACTCCTTTCTTAATGCTTTTATTATATTTGTTTTGAAGTCTAAGTTTGTACAGACAGAGAATGTTATTATAGACAAGACCCCAAAGGCTCTTGTTAGCAGACGGTTATGCTTCTAGTTGCCTTATCATGTTTCATGCACAACGTCTGTGGTTGTCAGGGGTGTTGGAAATATGTTTATTGAACAGGGCCTCCCTCCGTTGTTGCTGTGCATGTGGCAAGTGAACTGAATTGGGGCGTGCACAGCCAGGAGGAGGAGGAGAGACCTGTAGGAGTAAAAGATAGTTTGTAAATATCTCCTAATGCTCATTTTTAGTTGTTTTATGTTGCAGAAATTCATGGTATATAGTTGAATGCAAAACAAAACCATTTTATTTCAATGTTATTAAACAGTTTTGTTTTATTAGGAAGTAAATGTATTGTTGCAGTGTTTTGTGCCTGTTTAAAGGCTTTTGTTTAGCAGAGTGAATGTAAAATACAGTAAAATGTTAAGATTGTCATCTACGTTATGAAATACATCAACTTGGAATTTTTTTTTTAAGGTTCTAACAAGGAAGTGAGGTGTGCAATAGATGGCAAGGACATAGTTGTGTTTTTATGTCATATTAGAGATTCCATCAAATGTTTCCACTCACTGAATTTTGCTGATGGCTGAATTCTTATTGTGGATTGATAATAGGATCATGCCCTTAGCAGATGTTTTAGTTCTGTTTTACATTTTAAATTAAGAGATTCCCAGATGCTCTCTTTTCCCTCATCTTAGGGTGGGATGAATTTTTTATATATAAGCAATATTTATTTAACTATTCTATAAGATTATTGAGTGCCTGCAAAGGCCTTTAAACATTCCTAGCCTTCCTTTCCATCATTGTTAAATGACAGAAAGTAATTGTGCAATGTTTTCTGATGATGCACCCAGCGAGCTGCATCCAAACTCAAATCCGTCGTAATGAGTAATCCAACCAAATGCAGTTCGCGTTCAGCCCCCATCCCTTGACTTTGTATGAAAGAAGTGCTCTCTTACTCTCCTTCCAGTGAAGGGTTAATTAGCACAGAGGTTCACTGGATGAGACTGACCCAGGGATCTTACTGTATTTTACATGTGCCTGTAAGTTATTTGCAAAAATGGAAAAAAAAAAAAAAAGGAAAAAAATGGTGTCTTAACATGGCAACTACCAAACTACCTTAAAAATAAATGTTGGTGACATAGCCAGTTAAGTATCAGTGAGCCTCCCACCTACCTATGGTCTGCCTGTTCCTGTTGTTTCAAAACCATTTCACATATATACACTACTGAGGTAAGTTTGTAACTTGAAATGTGAACTTTTTTTTAGGGTTAAGAACAAAGTATAAAAATGTTTAAAAAAAAAAAAAGCTTTCGAGTTCTCTGTTTTCAAACATGCTGGCAGTTTAGTTGTTATCTTTAGTGCTTTGTATTTGAAAAGCTTTTAAGTTTATTTAGATCTTGCTTCATTTACAATACATTCTTAGGATGTATGCAGTAAATAAAACTTTCTTAAAGCAATTTCAGTACCTTATTTTAAATTGTGTTTTCTTTATACACTTTTTTTTTTCCCCTAACAAAATTAGAAAAAAAACCCTATAGCATAGAAGGAATTGACTGTTTCTGGCTGGAGAAAATCATATCTTTGATTTGGAATTATTAATGAAGTTGAGGTACATAGTAAAAATTGTGAATTATCAGTGTTTTCAGCCTTGGGTCCAGGTGGTAGAAAGTTGAGCGTTCAACTACTACTTAGCATCTGGATCAGAGTAGGATGTGGCAAAGCCTGTCACTGTTCTCAGTGCTGAAGTTTGTTTATGATCCCAAGGGTTTTACACTTAGATATATACATGGACTCAGTTGATGTGACATTGAGTTGTTCGATGGTCTCATGAAAGTACTGGTGTGACCTGTATGTTGGTCACCGCACTGGAAACCACAGTCTTCCGTTTCACCTTTTTTGACAGCGTGCAGCAAGATTAGCAAGACACTGCCTTTTTCTCTATACATCATCACTAACTTCAGGTGGGATCCATCAGCAAAGCCAATTAACAATTCAAGGGAAAGTGGTAGCTTGTCAGTGGAATTACCTCTAAAAACTGCCCCACGCAGCTTTGCCATTGATTAAGAATTTTACCTAGTTAGTCTTGAGTAGCCTGGGTTATGGGCCTTCCCAACCCACAGTTCTTGGAATTCTAACTTCCTGCTTCCTCTTAAAAGGATAAAGTCTTTCTTACAGACAGGAAAGGCCAGAGAACTTCCCAAAATGAGAGATCAACGAGATTTGCTGATACCATCTAGTTCTAGGAGATGAGCACAGATGCCCTTTAAGTTGCAGAATCAGAGTTTGATTGCTCTTGTCAGAAAATGAATTAAAAGAATTAATCTTACGGAATATTTCTTCCACCTCTACTAAATGCCCTGCTTTGTTCTAGGTGCTGTGGTGAGTACAGCATGAACAAAACCAACAAAACTTTGTACACATAGAGCTTACCTTAAAGTGGGAGAACACAGACCCAATAAGCTCGTAAACAGTGTGTTGGGTGGGGATAAATGCTGTGATTGTGTGATTCATTAGGCTCTAAGGCTGTTTGGTTTCCATCACCTCGGGACCTCACAAGCACTTAGTGAAGTAGGCAGAACAGATATGTGACTGGCCAGGGTCCCACAGCTCGTAGGAACCAGGGCAGAAATTCAGACTCCAAGTCTCAGCACACTGACCCTGAAAATAGATTTAGTAGTACCAACAGCCTGCTTCACAGCCTACAAAAAGAAAAGCTTTTCTCCAAAAGTAGTTTCTTTTCTGTTGACTTTTAATGTGTTTTCACATGCAGCCTCTTTCCTCAGGATAGGAACTGAAGGTAGAATGGCTGAAATGCCTACGTTCAGCTTGGAAGACATAGCACTAGGTGAGCTGCTAAAATTCTCTGGTAGATGGAAGGAATTCGACTTACGATGCTGTGTCAAGGATTATGGATGGGACTAAAAAACTACTGTAAAGTCAACTATACCCTTCTGATTCTAAACTAGACTAGATCCCCAATTTTTAAATTCCAAAAATATCTGTCAAGACAACATGCATAAGCACTTATTTAGGTGGAAGTAAAAACAACTAGAACACAAAAGTTCTAATTTTTCTTTCCTAATGAAGGATAACCTGTGAACAGTCCCAACGTTGTACTGGGTGCTGTGACATGGCATGCCCCATGCTGAGTGGATTTTGTCAACTATAATTGACCTTACTGGCTTACCAGACCCTGTTTTAAGGGCATTAGGGTACTTGACTATTTTAAAGAGATGTATATAGTATATTACATGTTATCTTTATTATAAAGTGTTCTGGGAAGAGTTGAGTTTAAAAAAAATAATAAAACATGAAATGTGACATTTCGGCATGGCTGTTTTGAAAAAAATCACATTTGACACAACGACCCTAAAGAAAAAAAAAAAGCATCTTCAACTTTAAAAAATAAATTAGTGGTAGGATAACACAGATGTACTCATTTTATCCTTGTCCTGCCACTTCCTTGACACGCTCCTCCTCTCTGACCATTCAAGGGCAAGGGCATGATTAGGCTTAAACACAGAATGAGACTCAGGAGACATGTTTTGCTTCAGTTCCAAGTTCTAGGCTATCAGATTAGACATGGCCTTCCTTCTCCTTCCCCCCATTAGTCTTCCCTGTCTAGGTGCCTGGTGTCCCTCAGTGATCGCCCAAACCCTTGGCAAGCGCTGTGGCCTGGTGAAACAGGCTGGGCTTGCAGTCTGGATGCCTAGGGTGTGAACCCCCAGCTTTGCTATTTACCAGCCGTGTGACCTTGGAAAAGACACCTTGCCTCTCTGAGCACCAGTTTCTTAATTGGTAAAAGAGATGATACCCTCATAAGGTTACTGTGAAAATCAGATAGGTTAATGAATCTTTAAAAAGCCTGGATAAATAAATTTTTAAA EMBV3_09702 CAGAGATCAGATGGGTCAGCTGCAAAACAGGACTAGGCTTCTGGGAACTGAGTGAAAATG Gene GeneID:511473|ZC3H14:NM_001034406:103_cdna Constitutive 0 NULL GeneID:511473 10 GENE ZC3H14 MGC127418 zinc finger CCCH-type containing 14 EMBV3_11336 CTTCGACATCCTCATCTTGCTGACCATCTTTGCCAATTGCGTGGCCCTGGGAGTCTACAT Gene GeneID:100336670|LOC100336670:XM_002700104:239_cdna Constitutive 0 NULL GeneID:100336670 X GENE LOC100336670 NULL calcium channel, voltage-dependent, alpha 1F subunit-like EMBV3_15774 GAGGAGGAGATTCTTCCCAGATCAAGGGTTCCACTGAGGATGGTTCACAACAGGAAACAC Gene GeneID:100137960|DYTN:XM_002685517:53_cdna Constitutive 0 NULL GeneID:100137960 2 GENE DYTN NULL dystrotelin EMBV3_32261 TTCCCATTTGGAACCTACCCCAGACTCTGCCTTATGGGTCTCCACACTTGACTAGATCCT Gene BVV0102_039204 + 1 EMBV3_19295 GK000021.2:54197379-54748361 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33220 CGGCCTTCACCTGAAGATCATGAAAAATATGGTGGGGATCCACAGCAACCTCATAAACTG Gene GeneID:614151|MRPL30:NM_001035443:98_cdna Constitutive 1 NULL GeneID:614151 11 GENE MRPL30 MGC137661 mitochondrial ribosomal protein L30 EMBV3_03076 CCTCTGTTCGAGGCCAGAGGTCTGATCAGCCCGAATCGTGATCTGTGTCATAAGAAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11813 ATGGTTGGCTCAGGTTTGAGGAAGTTCACATCCTCTGTGGCCCATAGGAGCCACTATGAA Gene GeneID:100297333|LOC100297333:XM_002694320:53_cdna Constitutive 0 NULL GeneID:100297333 17 GENE LOC100297333 NULL similar to cytochrome c oxidase, subunit VIIc EMBV3_02029 ATGAAGCATCCACTGCCTTAGAGCCCCCCTCATCTATACCTTCAGCTTCACGTAAGGGCT Gene GeneID:513129|LOC513129:XM_002692069:175_cdna UTR3_Alt 2 NULL GeneID:513129 13 GENE LOC513129 NULL hypothetical LOC513129 EMBV3_31089 TTGTTGTTTGCTGGGGTATTAATGGGGATGTGAGAAACTGAGGAGCCTGGACTGAGGGTG Gene GeneID:534304|STX17:NM_001034606:66_cdna Constitutive 0 NULL GeneID:534304 8 GENE STX17 NULL syntaxin 17 EMBV3_42273 GGATCCACGGTTATTTTTCTAGACCCCTGCCTCACTCCCAGTTGCCTTCACGATGCGTAA Gene GeneID:511996|AKR7A2:NM_001101949:135_cdna Constitutive 0 NULL GeneID:511996 2 GENE AKR7A2 MGC148743 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) EMBV3_39355 CAGGAAACTCTACCCAACCTTCTACTCAAGCTCCTACTAAGCCACCATGTGAGAACAAAT Variant GeneID:407152|PTPRC:XM_002694273:283_cdna 213^284 1 EMBV3_14784 GeneID:407152 16 GENE PTPRC cd45 protein tyrosine phosphatase, receptor type, C EMBV3_06601 TCTTTGCTGCCAATTATGTTTGAGTTGTTATGGATTGAAGTAAGACAGTATCGCAGAGGC Gene GeneID:505089|SEC24A:NM_001101849:7_cdna Constitutive 2 NULL GeneID:505089 7 GENE SEC24A MGC143173 SEC24 related gene family, member A (S. cerevisiae) EMBV3_43305 CTTCTCAGCAGAATGACGAAGGGCAACACAGAGGTTTTATAGGCGCTGAGGAACCTGAGT Gene GeneID:532185|MCF2:XM_002699597:105_cdna Constitutive 0 NULL GeneID:532185 X GENE MCF2 NULL MCF.2 cell line derived transforming sequence EMBV3_29470 GTGGCTCAGGTTCGTCGGCGTGCGACCAAGACTGGAAATAGCAAAGGCTACGGCTTTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25348 TTGGAAACGCCGGAAGCCTGCACTGGGTAAGCACATAGGGGCTAAGGAATCAGAAGCTGT Gene BVT0101_073221 + 0 NULL GK000019.2:45976755-46021802 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097347 1 XLOC_058227 Coding TCONS_00097347 XLOC_058227 Coding Coding - 19:46016717-46018201 - TSS72152 654 1 TCONS_00097347_1 152 2 0.560350640593392 2.3686569733535e-11 0.000376429047459001 0.00026884502525129 2.85098887675342e-11 6.97363018206517e-05 5.46950379315018e-06 0.00107867396612999 1.86926885103733e-07 0.000217157340776958 0 0 6.40420051799734e-11 6.82712516359287e-05 5.10286864284204e-11 5.46068687934199e-05 0 0 0 0.00074008002594201 0.000844788322590763 9.50267052498808e-08 0 0 0 0.00101702296899049 2.67787237018928e-07 0.00150548240972344 0 0 0 0 coding 0 0 0 0 -0.00682044153833194 0.947164728457129 0.0485217453769175 0.357740538595824 GGGGGAGATGCAGCAAGTGCCGATGGCCTGCAACCTCGCGACTCTTGCAGGGAACCGCACGAAGAGAGCGTGTGGGGGCTCTGTACTGGAGGGAGCTCGGGGATGGCGAGGGGCTTTGAACTTTACCACCAAGAGCTACAGGAGTCTCTCTAAAGAACAGTATCAAGCGAGGTTCTCCTTGGAGGCCTCTGGAAAGCTAGACAACCGGAGAGGGCAACCTGGTGGCAGGTGGTTCCTAGTGTGGATGATGGGTCCAGGACTTAATCGAACAAGATTTCTTTCAACTGCCCAGTATAGAAGTCGCGCTTGGAAACGCCGGAAGCCTGCACTGGGTAAGCACATAGGGGCTAAGGAATCAGAAGCTGTCTTGGATTGCTCCTTCTGCCCCTGTCAGCCTCAGCTGAGCGGCTCCTCAGGCGCCCAGGAGCCTCCTCTGGACAGATTTATCCAGGAAAATCTTGTCTGACCTCCCAACTTGAGACCTACCTCACCATCTCCTCTTCAGAGACCGCCGCCCCCCTCCACCAAGTTCTTAGCTGCTCCCCATCTTGTCCCTCTGGGCCTCTTATTCCACCTTATTTTTCTACACAGCCCTAAACATTGACCTTATATTCCATATATTCCATGTCGAATGTGTCTGTCAAATTACCCACT TCONS_00094097 TCONS_00094098 TCONS_00094099 r 5' 4776 TCONS_00094097 TCONS_00094098 TCONS_00094099 r 5' 3602 EMBV3_28761 ATCAGGCTCTGGTCTCATTGCTCACGGTGGCGCCACGCACCCTACTTAGCCTAGATTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23869 AGTTGCAGGGTGAGTGGGAGAAACCTGTGACTTGCAGAGAGGCCTTTAGTGATGATGCTG Gene BVT0102_037702 - 0 NULL GK000011.2:106172939-106183597 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026501 1 XLOC_015033 Coding TCONS_00026501 XLOC_015033 Coding Coding LOC100299080 11:106168108-106175417 = TSS18987 3665 1 TCONS_00026501_1 283 6 0.499315818281336 0.000530862737185739 0.000257722772707246 0.000292780664962536 3.17211761128458e-05 0.000127975970784444 4.88001916492166e-05 6.04651498317957e-05 2.90491477888691e-05 1.72226698971933e-05 7.97074057771001e-05 7.24546009835863e-05 0.000107319523696845 3.60128327555129e-05 2.31028344357897e-05 5.63952726493402e-06 0.00315641851738663 0.000883341822072334 0.00199905700003338 0.000387406076745151 0.00059454388915944 0.000165660908545524 0.00105691435837807 0.00154944998737517 0.00185714632784468 0.000234461620071101 7.30498598693024e-05 0.000185446056059998 0.000162488955146809 0.000180143756297757 0.000892404877858793 XM_003586689.2 SAPCD2 PREDICTED: Bos taurus suppressor APC domain containing 2 (SAPCD2), 0.0 6410 99.97 0.970804911323329 NM_178448.3 SAPCD2 Homo sapiens suppressor APC domain containing 2 (SAPCD2), mRNA. 0.0 1278 83.72 0.323328785811733 TCONS_00026501_1 sp|Q9D818|SAPC2_MOUSE SAPC2_MOUSE Suppressor APC domain-containing protein 2; 8e-29 115 72.62 0.286219081272085 0 coding 0 0 0 0 0.101188752713567 0.422295972353153 0.0551225958949431 0.355841378979203 ATGGCCGGAGCCGCCATGGCCGAGCCGGGCGGCGGGCCGCCTCCCGCGCCCGGCACGGAGGGGCTGCCGCGCGCCTTTCTGCAGAGCTTGCGCACGCTCTTCGACATCTTGGACGACCGGCGGCGCGGCCTCGTGCACTTGCGGGAGATCGAGTCCCGCTGGCGGGGCGCCGACGCGCGCGAGCTGCCCCGCGGCGTGCTCGAGGGCCTGTTTTCAGGTGGCCCCAGCCAGCGGCTACTTAACCTTCGAGCGCTTCGTGGCCGGCCTGCGCACCGCGCTGCCGAGCTCCGACGGCGGCACGCGGGGCCCCGCACGCGACCCGGCCAGGGAAGGCTGCTCGGCGCGGCCCGGGGGCCAGCCGCCGCCCTCGCGCCTGGTGTTCGCGCCGGCCGACGAGCCGCGGACCGTCCTGGAGAGGAAGCCCCTGCCCCTGGGCGCGCGCCCCGCGCCGGCTGCCCCCGGCGTCGCGAGTCGGAACCTGGAGAAGCCGTGCGGCCCGGCGGAGGCGGCGGCCGGTCCGGCGGAGCCCGAGCTGCTCCGGGGCGCGGCGCTGGAGCGGAGCCCGAGCAAGGACACGGGAGCAGTGACCTGCAGGGCCCAGGAACTCGGCACGGGGGCCGCCCACTGGGGGCCCCGTGCCCGAGGGGAACGGCGGAGGCACACCATCACCAACGGCGTGGACTGCGCCCTGCTGAAGCAGATGAGGGAGCTGCAGCAGGAGCAGGAAGTGCTGCTGCAGGGTCTGGAGATGATGGCACGGGGCCGGGAGTGGTACCAGCAGCAGCTGCAGCGCCTGCAGGAGCGCCAGCACCGCCTGGGCCAGAGCAGGGCCAGCTCGGACCTCGGGGCTGAGGGCAGCCCCCGCCTGCTGGGGCAGCTGCTGCCCAAGGTGCAGGAGGTGGCCCGGTGCCTGGGGGAGCTTCTGGCTGCGGCCTGTGCTACCAGGGCTCTGCCCTCGTCCTCCTCGGGGCCCCCTGGCCCTGTGTCACCCTCGGCCCCCAACTGGCAGCAGCAGACCATCCTCATGCTGAAGGAGCAGAACCGGCTCCTGACCCAGGAGGTGACCGACAAGAGTGAGCGGATCACACAGCTGGAGCAGGAGAAGTCTGCCCTCATCAAGCAGCTGTTTGAGGCCCGAGCCCTCAGCCAGCAGGACGCCGGGCCCCTGGACTCCACCTTCATGTAGCCAGCCCCGGGCACAGACATGGGACCTTGCCGCCTGGCCAGTCTCTCAGCTCTGGGCAAGGGGGCACTCCCTTGGCCCCCCTCTGAGGCAGAGGTGCCTGGACACCTGCCTGGACATCGCCTCCCTCCTCCCTTCTGGTCTGGTCTTTGGGGCTGGCTGAGTGGGAGACGCCGTCTTGCCGGCGCCCAGCCTGGAGCCGCTGTCAGGGAGGGGATGCCGCCCTCAGCAGCTGTGGGCCTACTCCCGTGTTCTGCTGGCCTGTGTACCCTCCGCCTCTCCAGTCCGCAGTCCTGCTCACCCTGCGCTGCTAACTGGCCTTGGAGCCTGCATTTGGGTGTCTCGGATGGGGCCCGGAGTAGGTGGCCCTGGGGTGGGACACCTCAGACCCAGTGGTGATTGGCCCCGAGGGTCCACGGACACATTTCCTTCCTCAGGACTAGGGGTCCGACCTCAGCCAGGAGTCCAGGGGCTTCTCCTGAGTCCAGTTCCAGGGGAGCCCAGGGCACAGTGTTCAGGGTTCACTGGATTCCTGCCTGAGCCAGAGCTGGTCTGCTTTCTCTTCCTCACAGACCTTAGACGCTAGGTGAACAGGCTGGCGGTCACCCCGCTGGCCCGGACTCCACTGAGCAAACAGTACCCCTTCTTGGGCCTGCCGAGTAGCCAGGCCAGGGCCATGGGCACCAGCGTGGCGTAGGGTGCCCTCCGTGGGCAGTGCCCTGTCCTCAGGGTGGTGGTACCCTCTGGCGTGCCCCAGGAAGTCCTGGAGACCCAGCAGCCTTAGCAGCACCCCCACCAGATGCGTGCTTCCCAGGGAATGACGGGCCTGGGTCTGGGTCCGAGGAATGTGGGCCTGAAGGACTCAGGAACAGCCTGGCAGCGGGTCCGGCCGGGGCCGTTTGTTGCCTGTGCCCCCACGCCCGGCCCGCTCTCAGGGAGACCACCTGCTCAGCTGGCCTGTAGCCACCCTGGCAGGGGCTCCGAGCACCCCCAGGGCCCTCCCCTGGAGCTGAGGGCATCCAGGCTTGGCAGGCAGGCCGTGTGGTCGGGCACTTACAGAGCCAGGATCTGAGGGCTGACTGTGCACAGCCTCACTTGCCTGGGGGTGGCAGCCTGCCCAGAGAGCAGGGTCCGGGGTGCTGCGCCCACGGGGCCCAGCTCTGCCTGTGCCAGCTGGAGCCCTCCCCACACCGGCAGCCAGTGGAGAAAGGTGGTTGTCTCAGGTCCGGCATGCAGGCTACTTGACGTTGACCTGGGCAGGTTCCCTGGGATGTGAGGCAGAAGGGGAGCTGGACCCAAAGGGCGGCACCAGGTCTCCAGCATCTGAGCCATGCGGTGACTGGACCAGGGCCCACCAGGACCACCCAGAGGCTGCCCCTCTCCTGGTTTCCCCTGGTCGTCCCCCTCTGCCAGCCCTTGACCAGAGCCCCCGCACCAGCTCAGGCCCTGAGCCCCTCAGTAGGAGTCTGCTTAATTCCAGAACTGAAAACAGCCCTCCCCAGCTCCGAATCCTTCCTCCACTCGCGTGACTCCACCAGGCCGGGGGCCATCCCAGCTCTGGGTTCTGGGGAGCTCCCTCCCCCGCTTCACCTGATCTGCTCCTGCCCAGCCCTGCCTGAGCCTGCGAGGGCTGGAACAGCAGAGGTGGCAGCCTTTGCCCTGAGGAGCTCTGCGTCCCTGCTGAGAGCTCGGTGTTCACCCCAGGGGTACCACCAACTGCAGGCGGTCCCTTCAGTTGCAGGGTGAGTGGGAGAAACCTGTGACTTGCAGAGAGGCCTTTAGTGATGATGCTGGCCTTCCACGCAGGACGTGACTTGCAGAGAGGCCCCTAGTGATGACGCTGGCCATCCACGAAGGACGGAAGACATGCCCTCCTTATTTGCAGCCTGCACTGAGGCAGCCTGTGCCGCCCTGGAGACCCCAAGGGGAGAGCTGTGAGTGCCCGCAAGCTGGCGAGCCCAGGTGGCTGGCAGAAGCAAAACAGCCTTTCCAGAGCAGCGAGTGTGAGCCACACAGGGGCAGCGCCGGGGGCGGGGTGGTCTTGGGGCCTGCCCGTGCCCTGGAGGAGGTGTAGCAGCGTCTGTCCACTAGATGCCAGCAACACTCAGTGTGACACCAGCGCTGGGAGTGGGCGGGCGAGGCCACCCTTGGCTGAGCATCTGTGCCAGAGCGGTGCGGCTCCACCAGGCCTCGCGATTCCCTGTGGACCAAGTGCCAAGGACAGGCAGTGTCTCCAGTTTAAAACCTGCTCACAGGGGAAGGAGCCACTGAGCCAGGAGAAAACAGATTCTGTGGCCATTTCAGATACCGGGACGGTCAGAGAAGATGCCGATGTTTCGTGTAGCTGGAAAAATAAAAGATGCTTGAAAACACAAACACGGAATCATCTATAGTTTCTTATTCCATTAAAAGTGTCAACCTTGACTCTATAAAAGTGGCCAATAAAATGGATCTAATAGAACTAGAAATTTGAAAATAAAAT EMBV3_24971 GAGGCCTACAAGCGGGGAAGGTCATTAAAGCCAGTGAACATCATGGAGCTCTACCACAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36477 GACCACCAGAATTCCAGAGGATCTGCTTCCAGAACTTACAAGTGGGTCTGGGTGGCACAA Gene BVT0102_202102 + 0 NULL GK000011.2:68583800-68632155 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028195 1 XLOC_015427 NonCoding TCONS_00028195 XLOC_015427 NonCoding NonCoding - 11:68597013-68603586 - TSS19834 862 1 TCONS_00028195_1 35 0.34338747099768 3 0.869293974437006 5.80538225809366e-05 1.17669581892756e-07 2.61940283068923e-05 0 6.10651758600122e-08 0 0 0 0 0 0 0 0 0 0 0 0 0 9.15075916712329e-05 0 6.41979750489198e-05 0 0 0 8.03759662179722e-05 0.00151552510011462 1.93834277618861e-09 0 0 0 0 noncoding 0 0 0 0 0.00291500595054661 0.978655562415488 0.0530793007593124 0.319890424573561 CTGAGACAAGCAAGACATGAGCATCACCTGGCCAGGAGGGTCCTCAGAGCGCAGATTAAGAGCAGGAGGTCTGAGTTCAGCTCATGGGGGTCAAACCCCATAACTAGCTGGGGGATGCCGGGCAAACTTCCTTCCTTGTTAAGTTTCAGTTCCCTCTTTTGTATGATAAGATTTCGTGATGCTTCTTCACAAGACTGTTTGGAAGATTAAATGAAACAATTCATGGAAACAGAATGCCTGACACTGAGTGGGTCCTCAGTATTGGCTTTAAATACAACCTGAAATAGAAGAAAATAGGAGCATAAACTGAGAGAACCCAAGAGGAAAGGCGTGGATTCTCTGATCATTCAAGTGTGCAAGTGCCCCATCTGAATCATTTTGCTGCTAAAAACACCCTCGTCTCACAGTCCTTCACCACCCAGTTGCACTAGACTGAGGGTTTGAGATGGCAAGAGCAATGCTGTGTGGGCCTCAGGAAGTCAAGCATATCCAGAACCGGCCACGTAGACCTGGTGTGGCTGTTTTACATGGGCTCAGACAGACCTGCCATTAGGAGCATTCCAGACCAGAGCTCAGCTGCTCCGAAGAGCAATAATTAAATCAGCAGACTGTGACGTCTGCTTTGGGTTCCTTTCACACCTGTCTGTCAGCGGGATTACTGGCTAAAAGAAAGTCTTGGCTGGGCCCAGACTGGGAACGAGACCACCAGAATTCCAGAGGATCTGCTTCCAGAACTTACAAGTGGGTCTGGGTGGCACAAAGCTGGACCACTGAAGCTACTGTGATGAGCAGCCAAGATGCCCTTATAGGGCTAAAGGACTTATTCCCTCAGCTGCTACAAGCACTGCCAGCTGAGAACCCC TCONS_00028190 s 5' 13109 TCONS_00028190 s 5' 13277 EMBV3_03681 GTTTTTGCTTTAGCTGGGCTAACTGACTTGTTCCACTTACTTATATGATAATTTCAAGAG Variant GeneID:512761|CRLS1:NM_001098951:1012_cdna 568^697 3 EMBV3_18940 GeneID:512761 13 GENE CRLS1 MGC143123 cardiolipin synthase 1 EMBV3_11324 AGCTGGGATTGTGGACAGATTACCATCCAGAAAGATCCTTTGGCTAGCCTACCCTTTTAC Gene BVT0102_127353 + 0 NULL GK000004.2:35588313-36561227 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181310 1 XLOC_110574 Coding TCONS_00181310 XLOC_110574 NonCoding Coding - 4:36260251-36432571 - TSS135733 634 1 TCONS_00181310_1 40 3 0.996338186735067 0.00397841866782919 0.00156354222759277 0.00271416556802557 0.000842436029269687 0.00144641611883892 0 0.00103836643408191 0.00180810930312148 0.00135794438181822 3.53144784341395e-05 2.28651076550623e-87 9.61479935519837e-80 0.000393283479899771 1.04797661748566e-254 7.29365739659995e-123 0 0 0 0.00171249990970441 0.0053216118647253 0.0013783207027277 0 0 0 0.00211022316140102 0.00335107146469724 0.00250559511233929 4.71205770564597e-75 0 0 XM_005250110.1 Ig PREDICTED: Homo sapiens sema domain, immunoglobulin domain (Ig), 2e-84 316 85.25 0.436908517350158 0 noncoding 0 0 0 0 -0.317063181933286 0.225047568930933 -0.0698401706352478 0.212406984193047 CACAGAGTCAAATAGCTCTAATAGAGATGAAGCTTGATAGATCCGCCCAGGTGTAGGTGAAATGGTAGAGCCTCAGGGGTAATAGATGCTGTGCTCTCGGGCTGAAGTTTAGCACTTTGTCCTGACCGGCTCTCAGGCAGCAGCGCGATGGGCTGCTCCTTGTACAGTTACAAAGTCAACGTGCTTCTCACCGCTCACGTTTATGCCTAATCCGGAGGGCAACCTGGAGCTAGGTAAGGATCGGCAGAACCACCCTTTCATTTCAGCGTGCGGACAAAGGACAGCAAATGAAAGTACTTAATATGCCCAGATACTTAAACAGTTGGATTGAACAAATGTACCTCAGGAATTAATTCTTCCTGGAAAGAGGATTAGACTGGGTTTGCCATGTTCCTCTGGAGCCACAGAGCAGAGATAGCTGGGATTGTGGACAGATTACCATCCAGAAAGATCCTTTGGCTAGCCTACCCTTTTACATTTCCTCGACCACATATGGTTACTATCAACTAGAATGCATTCTCAGGTTTAAGAGCCAAAACCGGAGGGAGGAGTCAGTTTTTAATGTGTTATGCTATCTTAATTTTGACCTAAAATGTGAGATTAAAATATAACCTTTAAAATAAAATATGGTTAG TCONS_00181312 TCONS_00181313 s 5' 0 TCONS_00181312 TCONS_00181313 s 5' 0 EMBV3_38020 TTAGATAAGTGACGTCCATGACCGAAGATTGTGCCACTTCCTGATGGCAGATGGCGGGTG Gene BVT0102_077596 + 0 NULL GK000019.2:57621462-57642747 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098012 TCONS_00098013 TCONS_00098014 1 XLOC_058403 Coding TCONS_00098012 XLOC_058403 Coding Coding GPRC5C 19:57640298-57656131 j TSS72500 3732 1 TCONS_00098012_1 442 5 0.764590702374937 1.24346789084683e-153 9.6436441812211e-11 3.20903541896452e-211 1.36100058238325e-10 1.85207640396164e-158 1.76000809229372e-203 6.02399351783061e-05 9.82073329652864e-06 4.49783309610282e-19 4.54982638769171e-06 6.97077893222869e-05 9.57797218298816e-05 8.63868666687611e-10 9.17401390910219e-05 6.40614910479031e-06 0.00615953108641234 0.00397594693876699 6.46735213762626e-06 2.66984523379896e-05 5.55453472938001e-41 6.33924460145058e-182 0.000192945274589198 0.00470095242956604 0.00272324773694372 3.24348137637823e-91 5.10209582930786e-10 1.00222734177295e-212 0.000613600635131372 4.43060612027459e-09 1.12915299906808e-17 XR_238822.1 GPRC5C PREDICTED: Bos taurus G protein-coupled receptor, family C, group 5, member C (GPRC5C), transcript variant X5, misc_RNA. 0.0 6289 100.00 0.934083601286174 NM_022036.2 GPRC5C Homo sapiens G protein-coupled receptor, family C, group 5, member C (GPRC5C), transcript variant 1, mRNA. 0.0 1893 83.71 0.479635584137192 TCONS_00098012_1 sp|Q2YDG0|GPC5C_BOVIN GPC5C_BOVIN G-protein coupled receptor family C group 5 member C; 0.0 910 99.77 0.997737556561086 1 coding 0 0 0 0 0.0173910977088186 0.868910612321337 0.0100753805472983 0.898099161525981 AAAGGAGTCGAGCGCCCGGAGAGGCCAGCGCGACAGCGAGCTCAGGAGCGCAGCCAGCGCCTGGTCCCGCTGAGAGGCAGGCCCTGCGCCCCGATCCCCCGCCGGGGCCCCGCCACCTCAGGCCAGGGTTGGGCCTGGCCCCGCGCCCTGCGCCGAGTCCCTCCCAGCCGCGCTCGCGCCCCGCCTGGAGTTGGCCCCAAACGCCGCGCCGGAGCTGGGCCGGCGGCGCGTCCCAGGGACCCAGCTGGAGCCTGGCCTGGCATCCAGGATGGCCATCCACAGAACCGTGCTGATGTGTCTGGGACTGCCTCTCTTCCTGCTCCCAGGGGCCCGGGCCCAGGAGCAGGCCCCGCCTGGCTGCAGCCCGGACCTCAACCCCCTCTATTACAACCTGTGTGACCGCTCTGAGGCTTGGGGCATCATCTTGGAAGCCGTGGCGGGGGCAGGCGTCGTCACCACCTTCGTCCTCACCATCATCCTGGTGGCCAGCCTCCCCTTCGTGCAGGACACCAAGAAGCGGAGCCTGCTGGGGACCCAGGTGTTCTTCCTGCTGGGGACCCTGGGCCTCTTCTGCCTCGTCTTCGCCTGCGTGGTGAAGCCCAGCTTCTCCACCTGTGCCTCCCGGCGCTTCCTCTTCGGGGTCCTGTTCGCCATCTGCTTCTCCTGCCTGGTGGCCCACGTCTTGGCCCTCCACTTCCTGGTCCGGAAGAACCACGGGCCCCGGGGTTGGGTGATCTTCCTCGTGGCCCTGCTGCTGAGCCTCGTGGAGGTGATCATCAACACGGAGTGGCTGATCATCACACTGGTGCGGGGAGCCGGCACAGAGGGCGACGCTCTGGGCAACGGCAGTGCGGGCTGGGTGGCCGTCTCCCCCTGCGCCATCGCCAACGCGGACTTCGTCATGGCGCTCATCTACGTGATGCTGCTGCTGCTCTGCGCCTTCTCAGGGGCCTGGTCGGCCCTGTGCGGCCGCTTCAAGCGCTGGCGGAAGCACGGGGTCTTCATATTGCTCACCACGACCGCCTCCATCGCCATCTGGGTGGTGTGGATTGTCATGTACACCTACGGCAACCGGCAGCACAACAGCCCCACGTGGGACGACCCCACGCTGGCCATCGCCCTCGCCACCAATGCCTGGGCCTTTGTCCTCTTCTACGTCATCCCAGAGGTCTCCCAGGTGACCAGGTCCAGCCCGGAGCAGAGCTACCAGGGGGATCTGTACCCCACCCGAGGCGTGGGCTACGAGACCATTCTGAAAGAGCAAAAGGGCCAGAGCATGTTTGTGGAAAACAAGGCGTTTTCCATGGACGAGCCAGCCTCAGCTAAGAGACCGGTGTCACCATACAGCGGGTACAACGGGCAGCTGCTGACCAGTATGTACCAGCCCACCGAGATGACCCTGATGCACAAAGCCCCGTCCGATGGAGCGTACGACGTCATCCTCCCGCGGGCCACCGCCAACAGCCAGGTGACGGGCAGTGCCAATTCCACCCTGCGGGCCGAGGACATCTACGCGGCCCAGGGCCGCCAGGAGGCCACGCTGCCCAAGGAAGGCAAGAACTCTCAGGTGTTTAGAAACCCCTACGTGTGGGACTGAGCCGGCCCCCGGAAGAGGTGGGCAGATTGGAGGACCTGGCCCCTGGAGAGGGTCTTCTCCCGCCGGGAGCCTGCGCTCTCCGCAGCCCCTTCCCTCCTCGCTGGCCCAGGGCGGGGGCGTGGGCCTCAGCCGGGAGACCCTCCCCGTCTGCCAGTGTTCGGATGGGCGTCCCGGTGCCCCTGCCCGCTCCTCAGTGTTTGCGGAGTCCAGGAGCCAGCTCTAGCTTCCTGCCAGGGTCACCTCCGGTGGCCACGCTCCAGCCAAATAGTGTTGTTCTTCTTGGGGTGGCGGCCGGCCAGCACCTACGTTCTCTGGAGTCTTGAGAGAGATTCCTGCAACCTCGGGAGACGTCGCAGGCGCTTCTGTCCTGGGCCTTGTTCCTCTGTGAGGAGCACGGGTACCTAATAAACACGTTTCTGCTTTATTAACCCTTCCTCTGGGAATGTCATGTCTGATCTGAGCTCTCGGTCGCGGGTGATCCGCCCCTCTGCTCTGGCCTGTGTGTGTCTCCTCTTTCTCCTCCTCCCTCTGAGTCCAGGTCCCGGGAAAGCCACTGCTGAGCTCTCCTTCTGTGTGGTGAAGGAGCCGACGCTTCCCTTCAGGGAATGGGTCTTCAGCTGAGCCTGGGTCCGTGTCCTGTGTGACCAGGATGGCTCTCCGGGCCCGGCTCCCGTCTCGGGTCTCATCCGACATCTGGGCTTGTCTGAAATCAGGCCTCTTTCCTCCGGGACCCCATCTACTGGATGGGGGGCAGGGAAGGCCAGCCCAGCAGCAGGCGGTTCTGTGCAGTGCTCAGTCCCCGCAAAATAACACGAGATGGTAGACGCCCTCTTCCGTGGACCACACGGCGTTCAGATGTCCTCTTTCCTGTATGTCCAGGCTGGGCAGGGCCTTTCTCATTGGCGCTGGGAGGGCCCTGAGGTCACCCATCTGGAGCTGTGGAGTCGGGGGCCGTGTGAAACTCTGAGGATGTGGCTGGGGCTCAGGGTACCCCCTCCCCACCCTGCCCCGATTCCTGCCCAGCCCAGCCTCTCCTGGCCCCTGGGAGACTTGAGACTGCAGGAGCGGTCTGCAGACAGCCAGCCTGCCTCTGGATACCTCCCCCCACACACAGCTCCTGTGTCCAGATGACCATCCTGCAGGGCCACCCTTCAGTGTCTGTCCCGCTCTGCTCCAAGGTGAAGCCAAACCATGGCGAAGCTGGCCATAGTCCTCACCAGGACCTCCTGCCACTGCCTGGCCTATGGAAGGCCACTGAGCTGGGCACAGCTCCCTCAAGGCCTGGACAGACTGTGCCTCTCTGAATGGCCTCCGAGCCCCTCAGCATCACCACCCTACACCTTCCGTGAACTGGGTCCCGTTGAGACATGAGGTGGGGGTGGGGCTGAATTCTCAGGGATGAATGGAGAGTCCTGGGCCTCTCCCAAGACAGACTTGTGGGACTTGGGACAGTCACTTAGATAAGTGACGTCCATGACCGAAGATTGTGCCACTTCCTGATGGCAGATGGCGGGGTGTCTACCTCACCTTGGGTACCTGGAAGGGCTGGTGCTGCCATCCTCACCTACGACTTGCTCCATCAGGGCCTGACGGCCACCAAGGGGAGCGGGAGCATCCTTGGGACCTGAAAGAGGCTGGCACCAACAACAAGGATGTGCACACAGCTTCAGACTCGGGGGAAGGAGATCTCTGTCGTGTCATCTCCGTGGTTTCCTCCTGCCCTTGGGTACCGCCGCTGGCTCATCCAAGGAGCCCAAGCCAGGTGTACCTGTGGAGCTCACCTCTGTGTGCGGAGATGGAGGGTGAGCCCGAGGCAGGTGCTGACTCCGAGGGCAATCCCACAGCCCCCTGGTGCCACCCTCCCATCCCTAGCATCTCTGCTTTTGTCACTGGGGTATTTCTCCAGGGCTAAGTTGAGTGAACAGACCCTGCAGAGAGTAGGTCTGTACCCCACGTGTGACAACCCCCTTGCCATCCACTGATCCTTGTACTGGGCTGCCCGGTTCCAGGAACGGAGTATAACTTACTCTGATGGAAAGGAAGAGGGGAGCTCTGTGCACCTGACTCCTCGAGATCTGGGTTAGTGGCCCCAAAACCTCGCCATGAATAAAGGCTCTGTCTTGCATTTCGAGCTG EMBV3_33152 ACCCATGCCGACATCGTGAACCTTCCTCGTTCAGCTGGAGGCGAGTTTGGATATGACAAA Gene GeneID:540873|DAPK1:XM_002689826:3_cdna Constitutive 0 NULL GeneID:540873 8 GENE DAPK1 NULL death-associated protein kinase 1 EMBV3_15460 GGCGAAATGATTGACCGCATTGAGTACAATGTGGAACATTCCGTGGACTACGTGGAGCGA Gene GeneID:282377|STX1B:NM_174618:224_cdna Constitutive 0 NULL GeneID:282377 25 GENE STX1B STX1B2 syntaxin 1B EMBV3_33261 AGTGGGGAGGCCCTGCTCCTGAATACTGTGCGTGTTTTGTTCACCTTGAGTTCACAGATC Gene BVV0102_284112 + 0 NULL GK000011.2:25841314-25933679 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027316 TCONS_00027317 TCONS_00027318 TCONS_00027321 TCONS_00027322 TCONS_00027315 TCONS_00027325 TCONS_00027326 TCONS_00027320 TCONS_00027314 TCONS_00027324 TCONS_00027319 TCONS_00027323 TCONS_00027312 TCONS_00027313 1 XLOC_015225 Coding TCONS_00027313 XLOC_015225 Coding Coding THADA 11:25591289-25926567 j TSS19380 6815 1 TCONS_00027313_6 1755 38 0.979786862802996 4.18224523191215e-08 2.96384416300771e-07 4.03198550444183e-06 2.17516759094237e-81 1.06417996669345e-07 2.74440731652176e-25 2.76738736263024e-105 7.03199709661442e-16 1.40885038816291e-13 3.35350771488409e-13 4.12739370918542e-06 8.75163455067212e-05 3.09229015403013e-22 6.63373958208644e-96 5.20592153512837e-07 0.00168019780705244 0.000780144178278248 0.00090036472384256 2.67536505709147e-07 1.10417786426938e-09 4.42382660059548e-07 0.000546539133235479 1.85691654965939e-06 1.04958080568311e-16 3.44440014618848e-18 1.52236132222559e-38 5.71240028791127e-14 1.62241700237786e-22 4.1011586393666e-05 1.48540340220378e-10 XM_001789303.4 THADA PREDICTED: Bos taurus thyroid adenoma associated (THADA), mRNA. 0.0 1.184e+04 99.35 0.97006603081438 NM_022065.4 THADA Homo sapiens thyroid adenoma associated (THADA), transcript variant 0.0 7297 86.47 0.89068231841526 TCONS_00027313_6 sp|Q6YHU6|THADA_HUMAN THADA_HUMAN Thyroid adenoma-associated protein; 0.0 2911 83.52 0.999430199430199 2 coding 0 0 0 0 0.0700721670004656 0.799194968692483 0.036159890768268 0.535800542810493 TAACCCGGACCCGGTAGTCGACTACAGACCACGCTGTGAGCTACCGAGACACCGTAGAGCTAGACCAGCTTCCGGGACTCATCCTGACTGCTGCGACTCTTCTCAGACGCTCACGAGCACGAGTGACTACTGTTGATTCTATTTAAAATGGGTGTAAAGAAGAAGAAAGAAACACAAGTTACTTCATTGACCGTTTGTCATCAGGACCTTGAAACTTTGAAATCCTTGGCTGATGTGGAAGGGAAAAATCTAGCTTCTTTGCTGTTGCATTGTGTACAGCTCACTGATGGAGTGTCACAGATCCGTTATGTTAAACAGATTGTGCCCTTACTGGAGAAGGCAAATAAAAATGGCACATGTGATCCCACTATTCGAAGTTGTTTGGATATTTTAGCAGGCATTTATCTTTCTTTGAATCTAAAGAATCCCTTGAAGAAAGTCTTGGCAAGCTCACTAAATGGCCTACCTGAATTTTTTCTAATTGAGGCTACACAAAGTTTTACTTCTCGTCTTCAGGAAGAGTTGAATACAAGTACTGATCTGTACTCTTACAGAAAAGTTATTGACAATATATCTTCCTGTATGGAAAACTTCGACTTGGATCAAGTGTTAATAATCTTCTTGAAAATGTGCTTCATTTCCTGCAGAAGAGTTTAATTGAAATCTCAGAAGAAAACAGAAAATTGGCTGGGAATCATATTGTTCAAACGCGGTTGATGAATGACTTGTTGGTGAGCATTAGAGTTTCGGTGATGTTAGTACAGAAAGTACAGGGTTTCCAGAGACTTCATTTGAAGAATTCTCCTACCTGGCAAAGTATGTGTGGACTGCTGAGTATGTTTACCAACTTTTTAAGTGATGATGGTCTCTTACAGACAATTCAGAGTACATCTGGATTAGCTGTTATTCTTTTTATTAAGGCTATGTTTCATCCACCTGAAAAGATTCCTGATTTGATAAGCAGTGTGCTTCTCCGTTCCGTGGACCCCACCAGCGCCCCCGAGTGGCTTTTGAGCTGCTGCAAGAGCCTTTGTTGTGCGGATGTCCCCCCATCAGCTCTCCTCTTCCTGTGTCAGGGGACACTCACTATGTTGGACTGGCAGGAGGGGAGGATGGGCCCCAGTGGGGAGGCCTTGCTCCTGAATACTGTGCGTGTTTTGTTCACCTTGAGTTCACAGATCAAGGAGTCAACCCTGGAAATGTTTCTGTCTAGGATTTTGGCATCTTGGACTAATTCAGCTATACAAGTCCTTGACTCAAGTTCCCCAAGCCTAAAGGACAACCTGAATGGGAATGCAGATGTGGTTAGGAGGCTTTTGGACTATGTCTATACCCACTGGGAACATCCACTGGATGCTTTGAGACACCAAACCAAAATCATATTCAGAAATATTCTCCAAATGCACCAGCTCACTGTAGAAGAGTCAGGTTCAGATTTGTCTGCTGATCGTTTCATTTTTGAACTGACCGAGAGTCTTCTGCGATTGGAATGGCATAGTAAAGGAAAGTACACATGCCTTGGTTGTTTAGTAGACTTGATAGGAATTGACCATATTTTGGCATTAGCTAAAACCATTCCATCGCAAATCTTAGAGGTGATGGGGGACCAGTCTCTGGTGCCTTACGCAAGTGACCTCTTGGAAACCATGTTTAAAAATCATAAGAGTCGTTTGAAATCCCAGGCTGTCGACAGCACTTGGATTGACAAGTGGCACGAGACTTGGGTTTCTCCTCTTCTTTGTGTACTGTGTGAAGGAAATCTGGATCAGAAATCTTATGTGATTGATTATTACTTGCCAAAATTACTGAACTGCAACCCTGAGAGCTTAAGCTATATGGTAAAGATTCTTCAGACTTCTGCTGATGCTAAAACTGGATCTTATGACAGCAGAGGGGCTCTGGGAGCTTTGATGGCTTGTCTAAGAACAGCTCGAGCTCATGGACATCTTCAGTCTGCAACTGATGCCTGGAGGGACCTTGTGTCCAGTGCAAGAATAAAGCAAGGCTTAATTCATCAGCACTGCCAAGTACGGATTGATACATTAGGCTTGCTTTGTGAAAGTAATCGAAGCACAGAAATCGTTTCCACAGAAGAAATGCAGTGGATCCAGTTCTTTATCACATACAATCTTAACAGTCAGTCTCCAGGAGTGCGACAACAGATTTGTTCTCTTCTTAAAAAGTTGTTTTGTAGGATACAGGAAAGCTCTCAGGTACTTTATAAACTGGAGCAAAGTAAATCCAAACATGAACCAGGGAGTGAGTCAACCAGACAACACCCTTCTGTTTCTTTACAGCAGTATAAGAACTTCATGTCATCCATTTGCAATAGTCTTTTTGAAGCATTGTTTCCTGGCTCTTCCTACCCAACTAGATTTTCAGCTTTAACCATTTTAGGCTCAATAGCTGAAGTTTTTCCTGTGCCAGAAGGTAGAGTCCAAACAGTGTATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAATGTTTAACTGGCACTTTTGAAGAAGTGAAAATTTTAGCATTTGATCTTCTGATGAAGTTACCAAAAACATTTGTACAATTTCAGGGTTCAGTGAAACTGCAAGGCTTATTCCAAGCAGCTCTGGAGCTTAGTACCAGCACCAAACCGTATGACTGTGTAACAGCTTCCTACCTACTGAACTTCTTAATCTGGCAGAATGCTTTGCCGTCATCACTGTCTGCTTACTTAAAAACTCAGCGGGTTGCATGTGGAGATGGAGATAAGTCTGCTGCTGTGGTAGAAAGTAACACATTAATAGTTATCAAATGCTTGTTGGAAAATCTTGAGGAAGAAGTATCTCGGGCTGAAAATTCTCTGCTTCAGGCAGCAGCGTCATTTCCAATGTATGGGCGGGTCCACTGTATAACAGGAGCTTTGCAAAAGCTGCCTCTGAACAGCCTGCAGTTGGTGAGTGAGTGGAGACCTGTGGTGGAGAAACTCCTTGTGACCTCCTATAGGCTCTCGGCCGTGGTGTCTCCAGTCATTCAGAGCTCCTCCCCAGAAGGCCTCATCCCCAATGACACTGATGCAGAGTCAGCAAGCCGCTTGCACAGGATTCTGAATGAGATTCAGCCACGAGATACTAACGATTATTTCAGTCGAGCCAAAATATTGAAAGAATGTGGTAGCTTTGATTTAGAGGACTTGAGTGCCAGTGTACCGAATATTGATACTTCTGCAGAAATCAAAGGTAAAGAAGGAAAAACATGTGACGTAACTGCTCAGATGGTGCTGGTGTGTTGCTGGAGAAGCATGAAGGAAGTTGCTTTACTCTTAGGCTCGCTGTGCCAGCTTCTACCCATGCGGTCTGTGCCAGAGTCTCCCGATGGACTGTTGACGGTGCAGCAGGTAAAAGAAATAGGAGATTACTTTAAACAACACCTTTTACAGTCCAGGCACAGAGGAGCATTTGAACTGGCTTACACTGGCTTTGTGAAACTCACTGAAATCCTAAACAGGTGCCCTAATGTGAGTCTGCAAAAGCTACCGGAAGAGTGGTTATTGAGTGTTTTAGAGGAAATTAAGTGCTGTGATCCTTCGTCTAAACTCTGTGCCACAAGACGCAGTGCTGGAATTCCTTTCTACATACAGGCATTGTTGGCATCCGAACCTAAGAAAGGCAAAATGGATTTGTTGAAAATAACAATGAAAGAGTTAATCTCTTTGGCTGGACCTACAGATGACTCACAAAGCACAGTCCCCAAGGTTCATGCTTTAAATATCCTTAGAGCCTTGTTCAGAGATACACGTCTGGGAGAAATTATTATCCCTTATGTTGCTGATGGAACTAAGGCTGCGATTCTGGGCTTTACATCCCCAGTCTGGGCAGTGAGAAATTCATCCACGCTTCTCTTCAGTACCTTGATCACAAGAATATTTGGAGTTAAAAGGGGAAAGGATGAACTTTCCAAAAAAAATAGAATGACAGGGAGCGAATTTTTCTCTCGTTTCCCTGAACTCTATCCCTTTCTTCTCAAACAGTTGGAAACTGTGGCCAGTACTGTGGACAGTGATACAGGAGAACTAAACCGTCATCCCAGCATGTTTCTCTTACTTTTGGTGTTGGGGAGACTCTACCCTTCCCCCATGGATGGCACCTGTTCCGCTCTCAGCATGGCACCTTTTATTCCCTTCATTATGAGATGTGGTCACTCACCTGTCTACCGTTCCCGTGAAATGGCAGCACGTGCCTTGGTCCCGTTTGTTATGATGGACGAAATCCCTAATACCATCCAAACTCTGTTGGCCAAACTCCCCGACTGCACTGACCAGTGTTTCCGGCAAAACCATATTCATGGGACACTTCTCCAAGTTCTTCATTTGTTACAAGCCTTCTCAGACTCCAAATACAGAATGAATACATACTTTCAGCAGGAACTGGCTGACGTCGCTGTTTGTACCAAAGCCAAGCTCTGGCTGGCCAAGAGGCAAAATCCATGTTTGGTGACCAGAGCTGTGTATATTGATATCCTCTTCCTGTTGACGTGCTGCCTTGACAAACTCTCAAAAGGCAACCAGCCAGTTCTGGAGCATCTTGGCTTCTGGGAGGAAGTCAGAAGGATCATCTCAGGATCAGAGCTGATAACAGGGTTCCCCTATACCTACACGGTGCCAGGCCTGCCCCAGTATCTGCAGAGCCTCACCAAACTGGCCATCGCTGCAGTGTGGGCAGTAGCGGCCCAGGCTGGAGAGCAGAACAGGGATGTTCCCATCTCCTTCTCTCAGCTGTTGGAGTCTTCCTTCCCTGAAGTGCGCCTGCTCACGCTGGAAGCCCTGCTGGAAAGGTTCTCAACAGCAGCCTCTGCTCTGGGAGAGAAGGGACTGCCGCCCTTACTGTGGAATATGGGAGGGACATTCTTGACATTGGTGCTGAAGGAAAATCACCCAGAATGCCTCTGCAAGATACTGAAAATTCTCCATTGCCTGGACCCCAGTGAGTGGCTCCCTCAGACAGAGGACCGTGTCCATCTCAGCCCAAAGGAGTTCCTGATCTGGACGATGGATATTGCTTCCCATGAAAGGTCTGAAATTCAAAGTGAAGCTCTGAGACTCACCTCCAAAGTGATTGCCCACCACATGCAGATGTGTGACGAGACCAGAGACTTGGTGGCCCCCAACCTGCAGCAGTGGGTTCAGTTGGTTGTCTCTTCCTGTGGAGATCATCTCCCCACAGAGTCCAGGCTGGCTGCTGCTGAAGTTCTTGCCAGCACTGCACCATTTTTCCTCACCAACCCCCAACCCATTCTCGGACTGCAGGATACGCTTGCTCTCTGGAAATGTGTCCTCACCCTCCTGCAAAGTGAGGAGCAAGTTGTCCGAGATGCAGCCACGGAAACTGTGATGACCGCCATGTCACAGGAAAACACTCACCAGTCAACAGAATTTGCCTTCTGTCAGGTGGATGCCTCCAGCGCACTGGATCTGGCTCTGGCTGTGCTGTGTGACCTGCTCCAGCAGTGGGATCAGCTGACCCCTGGACTCCCAGTCCTGCTGGGATGGCTGTTGGGAGAGGGTGAGGACCTCGTGGCCTGTGAGGAGAGCGCACATCAGGTGGAAGAAGACTACCCGTTTGAAAAAACGGAAATCAACTTTTGGGCCGAGACCCTGATCTTCGTGAAATACCTCTACAAGCACCTCTTCCGCCTCCTTTCTCAGTCCAGCTGGCATCCCCTCAGCCCCGAGATGCTCCGTCACCTTCAGAGGACTGCGTCGGAGCAATGCCACCTCCTCTCCCAGCTCTTCAGAGTGCTGCCTCCCACTGCTGAATTTTTGAAGTCCGCAGAGTTCACGAGACTGCGCATTCGGGAGGAAAGGACTTTGGCTTGCCTGAGGCTGCTGGCTCTTCTGGAAGGAAAGGAAGGGGAAGACACCCTAGTTCTTAGGGCTTTGGATTCTCCTGCAGCAGCGAATCAGTTAACGCTTCCAAGAACAAAAACAGCTTGTTGAAGAAGGATTTGTGGGATTGGGGTGGGGTGGGTTATTCCTCCACTCAGTCAACAGGGAAGTGTTCAACAGAAACTCCAGCATCTTCTCCCCTTCACACCGCGCCTCGTCCCCCAACCTCCCTTTGGTGAATCTAGTCTTCTGTCCCACAGAGGATTTTTTCTTAGGTTCATTCATTCAAGGCTGCCTCGTTTATTGCAGCTACTGTAGGAAGTGAGGCTACCACAGTGAATATTGACTCTGTTCCCAGGTGCAGGCCACCTGCAGGCCTGAATTAACCTTTCTCATCCCCCAGGACCTCCAATGTCCAACCAGAGCCAGCCTGCATTTTTCTCTGAATTGACTACACAGAATTGGGTTTTAACATATGATTTCCCCCCCACCCATTTTTGGCTGGTTGTAAGAGTTGGATTAGTTAGCAAACAGCCCACTTGGTCCAAATTTCAAATTTTATTCCATTTTAGTGAAGTAAGAAATATGTTCCAAATGTTGGATCCTGGGAGAATTAAGCATTAACTTCTTACAAATAAGTTTTTTACTGTCTGCATGTTTAAGCCTTCAGTGACCTACACATGCCATCCTCATTATTAAAAGAGCCATTACAAGCTCCTACCCCTTGACCCCCAATAAAAAGTATTTGTGCCATTGTTAAGAAATCATATTCTACCACCCACTGAAACCATAGCCTCTTGGCTGTTAGAAGGAACCTGGGGAAAGGGGAGTCAGAATAAATGACTTATTTGATGTCTACACTGTTTACTATCATTTTCTTGGTTGCAGTAACAAAAAGATTCTTACTTAGTATCACAGAAAACATTTATCCATTTTAGTGAT EMBV3_00489 TACACCAGCTTTTCACTAACAATATGTATGTAAGGAGATGGGGAAATCCATGAAGATAAT Gene GeneID:613349|DYNLT3:NM_001101220:46_cdna Constitutive 1 NULL GeneID:613349 X GENE DYNLT3 NULL dynein, light chain, Tctex-type 3 EMBV3_15869 TTTAAAGGTCCAACCACGGGAAACAGCCTTCACCTCAGAACCCAGGCTCTAACCTTCGTC Gene GeneID:539431|MEN1:NM_001076161:80_cdna Constitutive 0 NULL GeneID:539431 29 GENE MEN1 MGC140554 multiple endocrine neoplasia I EMBV3_32446 CGTTTTGAGTAAGATTCTTATGTGTATTTCGATTGCAGTTTAGCTACTGTCATCCATTAG Gene GeneID:540559|LANCL1:NM_001076227:41_cdna Constitutive 2 NULL GeneID:540559 2 GENE LANCL1 MGC137731 LanC lantibiotic synthetase component C-like 1 (bacterial) EMBV3_03149 GGACAAATAAACAAGATGTCACACTGTAGTCTCCACTTGGGTGTCAGAGCGGCCTAGGAC Gene GeneID:534492|MAPK14:NM_001102174:56_cdna UTR3_Alt 2 NULL GeneID:534492 23 GENE MAPK14 MGC142910 mitogen-activated protein kinase 14 EMBV3_01542 CTCCCGAACTAGAACTTGAAGAACTAAATGAATGCAATGAGAGCAACGATGGAGCATCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09548 AGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCGGTGATATTAACCAAAGCAGTTGGTGG Gene GeneID:613859|SLC10A7:NM_001076292:25_cdna Constitutive 0 NULL GeneID:613859 17 GENE SLC10A7 NULL solute carrier family 10 (sodium/bile acid cotransporter family), member 7 EMBV3_38465 TACAACAGATGGCTGCGAAAGAGCTGGAGGAGCTGGAAAGGTGGAAGAAACAACAAAGGG Gene GeneID:614555|EPSTI1:XM_002691775:367_cdna Constitutive 0 NULL GeneID:614555 12 GENE EPSTI1 NULL epithelial stromal interaction 1 (breast) EMBV3_35488 CCTGACACTCAATCCTTCTCCGCTTCAACTATCCAGAGTGGTTTCTGTACATCTAGCTGG Gene GeneID:100296338|LOC100296338:XM_002694483:334_cdna Constitutive 0 NULL GeneID:100296338 17 GENE LOC100296338 NULL hypothetical protein LOC100296338 EMBV3_13973 AGTATCATCTGTTACTATAATACCTACCAGGACTAATTGTCAGCCTGGAAAAGGAACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06550 AAATTCAGCTTGCAGTCGAGGGAACCAAGGATGGTTTGTGGTGTTTGAAATATGATGATC Gene BVT0102_001384 - 1 EMBV3_31231 GK000015.2:1609917-1625281 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31274 ATTCTGCCGCAGCTACCACCGATGAAGTAACACAGGTGCTGGGGCCAGACACTGAATGAT Gene BVT0102_065131 + 0 NULL GK000006.2:107326581-107416535 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204084 1 XLOC_124337 NonCoding TCONS_00204084 XLOC_124337 NonCoding NonCoding NSG1 6:107354985-107378466 x TSS152743 628 1 TCONS_00204084_1 58 2 0.973339011925043 2.17269099657149e-09 0.000555597977143453 0.0002742120475558 2.64463090389391e-05 0 1.13916674977155e-05 0.000111433899490846 3.76728896656791e-05 0 0 0 0 4.11160001713397e-05 0 0 0 0 0 0.000262626972738415 9.65817834918354e-05 4.8339656160521e-06 0 0 0 2.2065219801319e-05 0.000493631300144797 0.000485151432650284 0 0 0 0 noncoding 0 0 0 0 -0.139950063660925 0.263302603850801 -0.00552285336860743 0.909906468509438 CATGGCAGGGATATTCCCCGCATCCCCACCCCTGCCCCGTCACCCGTCATCGCAAACAGGCTGGAAAAAAGGCCAAGTCCTGAGTCAGAACCGCCCTGCCAGGCGTTCAATGAAACAAGAAGTGCCTGCACACTTCGGGGAAGAGAGAGCGCTTCCTGGTGGCTGGGGTGACTTCTAAAGAGCAGCAAGGCGGGCAGAAAGGATGCGAGTGCCCAATTTTAGGTCTCCGTTTCACGATACAGTTGTCTAGGCTTTTAAACGTTTTCTAAGCGTTAACTCTTGAAAAGACAAATCTTAAGGAACAGAAAGCACTCGATTGCAAGCTGTATTTAAGAAAAGAGGGGGTTCATTAAATTCAGCACACACGCAAAAATCCCACTTCCAGGAGAGGATGGTGAACGGCTCTCCCCAGTTACACGAACACTGAGGAGCGCGAGTGTTCAGCTTATTTGGAGATTTTCACAAAAGGAACAAAGAGAGGAAGGTGGCGGCGAAGGAGCGCGCATTCTGCCGCAGCTACCACCGATGAAGTAACACAGGTGCTGGGGCCAGACACTGAATGATCAATTCATCGATTGGGACCCAAACAATACAGTTGAGCATGTGAGAGGTTTACAATTTTTCAGTG TCONS_00206123 r 5' 247 TCONS_00206123 r 5' 247 EMBV3_23836 TCTTTCTGTCCCCTGAGACCAGTCTTTCTCCTGACACCTCCAAGGGGAAAAGCTCATTCC Gene BVT0101_005086 - 1 EMBV3_02959 GK000003.2:98110670-98190150 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06386 CTGACAGACACTTGAAGAATCAACACCCATTTACAGCCAAGGAGAGAGGGGACCTGACCA Gene GeneID:506526|ITGA10:XM_002686083:16_cdna Constitutive 0 NULL GeneID:506526 3 GENE ITGA10 NULL integrin, alpha 10 EMBV3_31126 ATTTATTTACATGATAAAGAATTCGAAGTAATGGTCATAAAGATGCTCACCAAACTGGGG Gene BVT0101_027800 + 0 NULL GK000016.2:77522580-77561998 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19559 AAGATACGCAACACATAGATTCCTGGTTTGTTGATAATACTTACAACAAACAAGCAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16928 CAACTTGGAGGTGGAGGAATTCAGGCATCCCACTCGTCACTGCAAGATCACATTGTCCTT Gene GeneID:786811|LOC786811:XM_002694382:212_cdna Constitutive 0 NULL GeneID:786811 17 GENE LOC786811 NULL similar to Testis-specific Y-encoded protein 1 (Cancer/testis antigen 78) (CT78) EMBV3_26616 TCTCTTCTCCGCGAACCGCTGGGAGCACGTAATTTCTCCCTGGATTGGTGTAAGCAGCCG Variant GeneID:506946|DTYMK:NM_001098893:17_cdna 260^350 4 EMBV3_35295 GeneID:506946 3 GENE DTYMK MGC148989 deoxythymidylate kinase (thymidylate kinase) EMBV3_04181 GCTGGATCCCACTTCTCCTCCTCTTAGGTTGTTTCCAGCCAACTTGAATATCTAGACTTC Gene GeneID:532684|LOXL2:NM_001099053:11_cdna Constitutive 0 NULL GeneID:532684 8 GENE LOXL2 MGC159766 MGC159921 lysyl oxidase-like 2 EMBV3_23402 GCTTATTTTTAAGCCTCCTACGTACCATACCTGCAACATGGGAAAACTGCTGCCCGGTGG Gene BVT0102_086987 + 0 NULL GK000002.2:127833471-127834360 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27771 AGCTGTAGCATGTGCAAAGAAGATTGTCAGCGAGCAAGGCATTACAGCATGGGTGGCATG Gene GeneID:787241|LOC787241:XM_002687391:86_cdna Constitutive 0 NULL GeneID:787241 5 GENE LOC787241 NULL similar to lysozyme EMBV3_29354 GAAGACCTTCTCTACATGTGTTTCTCACCTGACATCCGTGGCCATCTACCAGGGAACTCT Gene GeneID:538864|LOC538864:XM_002693731:462_cdna Constitutive 0 NULL GeneID:538864 15 GENE LOC538864 NULL similar to olfactory receptor 152 EMBV3_18186 ATCTGAAGGACCTCTTCCAGGTTTCAGGTGATTCAAGCCCAGTACCAGCAGCAGGATGGA Gene BVT0102_319718 + 0 NULL GK000023.2:50498285-50515218 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133680 TCONS_00133678 1 XLOC_081181 NonCoding TCONS_00133680 XLOC_081181 NonCoding NonCoding LOC100848642 23:50510341-50515152 x TSS99789 738 1 TCONS_00133680_1 176 2 0.846985446985447 0.000165923078919644 2.04235957249969e-05 9.79661537788957e-10 0 0 4.846956011756e-06 1.58041097761894e-05 0.000177136172111849 0 1.12921262531301e-23 1.54564649573144e-06 9.06902662695752e-05 6.54055759478081e-06 0.00014962199325954 0.00122876651973778 0 0 0 2.88484623824172e-05 0.000251732079464701 0 0 0 0.000124866536218117 0 0.000192346377374632 2.02724018804284e-56 0 0 0 XR_239728.1 LOC101903823 PREDICTED: Bos taurus uncharacterized LOC101903823 (LOC101903823), 5e-35 152 100.00 0.112466124661247 0 noncoding 0 0 1 1 -0.0558328451070052 0.662996156844328 -0.0132158116415609 0.81271197383995 GACAAGTGAATAACTGGATCCAGTAAAATGGTGAGACCCAGATTCTGAAGGACCTCTTCCAGGTTTCAGGTGATTCAAGCCCAGTACCAGCAGCAGGATGGAAAGTCACCCGGTGTACATCCATGACGTGGTCAGAACCGACCCCATCTCGTGAACAGGACCTGTCTGCTCATCTCTGACCCCGGGGGCAACTGAACATGCTCAGGGAATGTGCACGGTCAAGCAGATCCTCCAGTGCAGACACAGTGGCTCATTGATGGACATCTCCCGGTCTGGGTTCATGGCCCTCCCCTCTTCTGCTGCTTTATGGAGGGCTCACATTTGGTCTCCCCTCGGCTGCCATAGCCTCTGCTTCGCTCTGGTCTCAGGAGCAGGGCCACTGAGCAGAGGAGAAAGGGAAGCCCCGCTCATCCTTCCAGGCCTGGAGCAGACAGCGCTCTCCCCGAGGGCCTGGACGGGGTGGGCGGAGGGAGGACCCAGAGAGCAGGCAGCCAGTGCTCTCCACCGACGGGACCACCGAGCACCCGCCTCCGATGGCAGCTGCAATTTTGAGAAGGCACGGGACACGAGAACACATGGGCACACGCACACGCACACAGACACACACAGACACACACAGGGGCGCCCACACACACACATACAGACACATACATACACAGACACAGACACACAGACGTACACACACACACAAGTCACACACACAGACACACACAAAGACACACACACACAGACACACAC TCONS_00135494 r 5' 0 TCONS_00135492 TCONS_00135493 TCONS_00135494 r 5' 1082 EMBV3_19388 GCCTCCGGCGGCGCTCAGTGGAACCATCAGAAGCTGAGCTCCTTAGGAAAATTCGCATCC Variant GeneID:507530|C14orf44:NM_001024491:61_cdna 74^950 1 EMBV3_43025 GeneID:507530 10 GENE C14orf44 NULL chromosome 14 open reading frame 44 EMBV3_04343 CCATCTGAGATCTACACTCCATGAAAAACTCACTTGGACACTGGGGCCAAAAGCTGATGA Gene BVV0101_020363 + 0 NULL GK000002.2:122213701-122233942 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106506 TCONS_00106504 TCONS_00106505 1 XLOC_062818 Coding TCONS_00106505 XLOC_062818 Coding Coding KHDRBS1 2:122233267-122239582 j TSS78378 1832 1 TCONS_00106505_3 185 6 0.710801393728223 6.70379981531485e-09 4.47165834967843e-08 1.10199125332573e-08 0.000245255296584078 0.00129488202965835 0.000267270808324137 0.001238646608078 0.00066809096338016 0.000787495368461511 0.000107968159473409 1.36059551945554e-11 6.6510693049895e-10 7.6000657226434e-05 2.06116114116171e-10 0.00018450252315788 0.00428289787658984 0.00083066946342576 0.00291202591403528 0.00069611774317677 3.10915783914421e-05 0.00046774733672206 0.000195585821175552 1.007204736818e-09 0.00118726101232309 0.00121782743753222 0.000422065155129263 0.000166603902529216 9.46387225789706e-05 9.63398854990832e-05 0.000497383087397383 NM_001046442.1 KHDRBS1 Bos taurus KH domain containing, RNA binding, signal transduction associated 1 (KHDRBS1), mRNA. 0.0 2044 100.00 0.617903930131004 NM_006559.2 KHDRBS1 Homo sapiens KH domain containing, RNA binding, signal transduction associated 1 (KHDRBS1), transcript variant 1, mRNA. 0.0 2758 93.72 0.987991266375546 TCONS_00106505_3 sp|Q07666|KHDR1_HUMAN KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated protein 1; 5e-127 369 100.00 0.994594594594595 0 noncoding 1 1 0 0 1.51209714000811 0.0147602922408959 -0.356804353043455 0.00119509444105185 AGATTTTCCTCAAAGAGGTGACAGGATATGATGGATGATATCTGCCAGGAACAATTTTTAGAGCTTTCCTACTTGAATGGAGTACCAGAGCCCTCCCGTGGACGTGGGGTGCCAGTGCGAGGCCGGGGAGCCGCACCGCCTCCTCCACCTGTTCCCAGGGGCCGTGGCGTTGGGCCACCTCGGGGGGCTTTAGTGCGTGGTACACCAGTGAGAGGAGCCATTACCAGAGGTGCCACTGTGACTCGAGGAGTGCCACCCCCACCTACTGTGAGGGGTGCTCCAGCACCAAGAGCACGGACAGCAGGCATCCAGAGAATACCTTTGCCTCCACCGCCTGCACCAGAAACATATGAAGAATATGGATATGATGATACATATGCAGAACAGAGTTATGAAGGCTACGAAGGCTATTACAGCCAGAGCCAAGGGGACTCAGAATATTATGACTATGGACATGGGGAGGTTCAAGATTCTTATGAAGCATATGGCCAGGATGACTGGAATGGGACCAGGCCGTCGCTGAAGGCCCCTCCAGCTAGGCCGGTGAAAGGAGCATACAGAGAGCACCCATATGGACGTTATTAAAAACAAACATGAGGGGAAAATATCAGTTATGAGCAAAGTTGTTACTGATTTCTTGTATCTCCCAGGATTCCTGTTGCTTTACCCACAACAGACAAGTAATTGTCTAAGTGTTTTTCTTCGTGGTCCCCTTCTTCTCCCCACCTTACTCCATTCTTAACTCTGCATTCTGGCTTCTGTATGTAGTATTTTAAAATGAGTTAAAATAGATTTAGGAATATCGAATTAATTTTTTAAGTGTGTAGATGCTTTTTTCTTTGTTGTTTAAATATAAACAGAAATGTACCTTTTATAATAAAAAAGAAGTTGAGTAAAAAAAAAAAACACAAACCTGTTAGTTTCAAAAGTGACATTGCTTGCTTAAAGGTTCTGAAGTTAAGGCTTGTTAACTTTCTCTTAGTTTTGATTTGAGGCATCCCGTAAAGTTGTAGTTGCAGAATCCCAAACTAGGCTACATTTCAAAATTCAGGGCTGTTTAAGATTTAAAATCACAAATGTTAACGGCAGTAGGTGCCACCATGTAAAAGTGAGCTCAGATGTCTCTAAAAATGTTTCCTTTATATAAAAAAACACATGGCGGTTGAATCTTAAGGTTAAATTTTAATATGAAAGATCCTAATGAATTAAATAGTTGATGCAATTTTTAACGTTAATTGATTTAAAAACAAAACAAAATTAGGTTCGTAAAACTGAATTTTTCATTACGTGGGTTTTGAAATCTAGCCCCAGACATACAGTGTTGAGAGATACTTAGCGGGAAGTAAGTTTCTAAAGAGGTTGATTTGGGGAGAGGGGCTGGCCACTTGAATTTGATGGAGAGCTTTTTAATCATGAACAACCTTTCAGTAATAGTTCTAATAATTAACATTTCAGTATTTCAAAAGACAAAGTATTTTGTCCATCTGAGATCTACACTCCATGAAAAACTCACTTGGACACTGGGGCCAAAAGCTGATGATATCCTTAAGTTGACGGTTATCAATATTGAGCTGTTCCCAAGGAAGTTAGTCAAGTATGTCTCAACACTAGCATGATATAAAAAGGGACACTGCAGCTGAATGAAAAAGGAATCAAAATCCACTTTGTACATAAGTTAAAGTCCTAATTGGATTTGTACCGTCCTCCCATTTTGTTCTTGGAAGATTAAATGCTACATGTGTAAGTCTGCCTAAATAGGTAGCTTAAACTTATGTCAAAATGTCTGCAGCAGTTTGTCAATAAAGTTTAGTCCTTTTTTAATCAAAGTAAAT EMBV3_27630 AAAATAGGGGCATTGAAGTTACTCCTACCACCAGGGCTTTATTTTGGGGGTGCCTGGGTC Gene GeneID:524677|LOC524677:XR_083777:165_cdna Constitutive 0 NULL GeneID:524677 10 PSEUDO LOC524677 NULL similar to Ornithine decarboxylase antizyme 2 (ODC-Az 2) (AZ2) EMBV3_02923 CTGCTCTTGCCGATTACCATACCTGTTTATGTGTTCTTCCACCTTTGGACTTGGATGGGA Gene GeneID:514374|PIGY:NM_001038102:174_cdna Constitutive 1 NULL GeneID:514374 6 GENE PIGY MGC134017 PREY phosphatidylinositol glycan anchor biosynthesis, class Y EMBV3_39386 GACACTGTGCAGAGAGCACATTATCGCCAAGTCTGTAAAGTGAATAGAGGGCCTCAGACG Gene GeneID:504970|TMEM220:XM_002695809:149_cdna UTR3_Alt 1 NULL GeneID:504970 19 GENE TMEM220 NULL transmembrane protein 220 EMBV3_34171 TGGCATCCGAGGACCTTTATCCAGAATTGGGCAGGGGCCAGTGGTCGCCCAGGACAGAGC Variant GeneID:521103|C28H1orf57:NM_001075816:84_cdna 321^417 5 EMBV3_26149 GeneID:521103 28 GENE C28H1orf57 C1orf57 MGC140669 chromosome 1 open reading frame 57 ortholog EMBV3_04334 AGATTACTGCCGAATCGCGTTCCAACAGCCGGTGGCCTTTTCTACTGGGAAGTTCGCCTG Gene GeneID:100337078|LOC100337078:XM_002699571:100_cdna Constitutive 0 NULL GeneID:100337078 X GENE LOC100337078 NULL zinc finger protein 75-like EMBV3_32384 TCCGGAGGGCAGGAGCTTTGTCCCTTTATTCATCTTTCTATCCCCAGAACCTAGCACAGG Gene GeneID:537404|SMYD1:NM_001083484:125_cdna UTR3_Alt 2 NULL GeneID:537404 11 GENE SMYD1 MGC137576 SET and MYND domain containing 1 EMBV3_33956 ATGGACTGCATCGGGCTGGTTTTGATGCCTTTATGACAGGTTACGTGATGGCCTATGTGG Gene GeneID:513052|TOE1:NM_001075594:152_cdna Constitutive 1 NULL GeneID:513052 3 GENE TOE1 MGC139728 target of EGR1, member 1 (nuclear) EMBV3_33169 GTTAAGACTCTGCGATTCCAAAGCAAGGGGGTGTAGGTTTGATCCCTCATCGGGGAACTA Gene BVV0102_357293 - 1 EMBV3_01550 GK000005.2:104039525-104058658 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05175 GCAACTTTCAGATGCCAGCCCTAATCATGATGGTTTTAGAGAATCTAGTTTGGTGTGGCC Gene BVT0102_020975 + 1 EMBV3_09756 GK000008.2:39618683-39631341 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31314 TGCAAACCTACAGAAAAGCATCGAGAAAGCTAAAGTTGGCAGACATGAAACGGAAGAGCG Gene GeneID:618239|MND1:NM_001038223:28_cdna Constitutive 1 NULL GeneID:618239 17 GENE MND1 MGC134110 meiotic nuclear divisions 1 homolog (S. cerevisiae) EMBV3_40027 AGAGTGTGAGAAATGTGCCAAGGATTGTGTGTGCAAAGGTGGAGAGGGGGCCGAAGCTGA Gene GeneID:613320|MT3:NM_001113304:397_cdna Constitutive 0 NULL GeneID:613320 18 GENE MT3 MGC148630 metallothionein 3 EMBV3_03039 CCTAAAGCCAAACTTACATCAAAAGAAGGTCAGGGTCACTGTCTGGAGGTCTGCTGCCTG Gene BVV0102_370242 + 0 NULL GK000024.2:47062660-47102411 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142951 1 XLOC_087376 Coding TCONS_00142951 XLOC_087376 Coding Coding - 24:47086550-47088004 - TSS107162 1454 1 TCONS_00142951_3 136 1 0 0 0 0 0 0 0 0 0 0 0.000118850755417842 0.000236948005159573 5.90207618920807e-05 0.000171683468257941 0.000967867327683968 0.00029693648581186 0 0.000673681978286757 0.000224334070825028 0 0 0 0.000183730595463441 0.000668808687102046 0.000126829959999203 0 0 0 7.26663660732962e-05 2.00327446934259e-05 0.000223288082954548 XM_005201966.1 LOC534913 PREDICTED: Bos taurus mariner-like transposase (LOC534913), 0.0 783 75.80 0.760660247592847 NM_001243723.1 SETMAR Homo sapiens SET domain and mariner transposase fusion gene (SETMAR), transcript variant 2, mRNA. 0.0 910 79.17 0.735900962861073 0 coding 0 0 0 0 -0.0105638676373324 0.924062948650258 0.0234033273526195 0.677444968491754 GAGATGAAGGACTTCAGACGACAACTATTCTGCCTCTCCTCCACCACTGCGCTTGCCTCCTAGAGGCTATTCTGGAGGAAGAAAGCAGGACAGCAGCGGTGACAAAGGTCCAGGCCACCAGACTGTCTGAGCGTGTTCCAGATTAATCACAACTAGTTAGTTAATTCACAAACTATTAGGGTGGCACAAAAGTAGCTCGGGTTTTGGACCATGAATTTTAAGTCGTTAGGCTCAAATACATCTTTATTAATCAAAATAGGAATCATCACAATCAACAATCAATGTTTGCCAATGAGAAATGTTTGTTTATTTCTGCAGCATAAATATCCATGCTCCAGGATTCGACGAACTCTTGGAAAGCATTTTCTGCCTCCTGCTGGTTGCAAAAGCATTTTCCTGGCAAAAAGTTGTCGAGATGCTTGAAGACAACAAGTGTAGAAAAGGGTAGTCGGTTGGCAAGAGATGGTCAGGTGAATATGGCAGATAAGGCAAAACTTCATAGCCCAATCTGTTCAACTTTTGAAATGCTGGTTGTACGATACGCAGTTGGGCGCTGTAGTGGAAACTGGGCCGGTTCTGTTGACCAGCGCCAGATGCAGGCGCTGCAGTTTTCAGTGCGTCTCATCGATTTGCTGAGCATACTTCTCAGATGTAAGGGTTTCGCAGGGACTGAGAAAGCTGCAGTGGATCAGACAGGCAGCAGACCTCCAGACAGTGACCCTGACCTTCTTTTGATGTAAGTTTGGCTTTAGGAAGTGCTTTGGAGCTTCTCGGTTCATCCACTAAGTTGGCTGCCAGTTGTTGTATAAAATTCACTCGTCATTGCACATCACAATCCAATTGAGAAACCTTTCATTACTCTTTGTAGAATAACAGATGACAACATTTTTCAAAACGATGATTTTTTTTGATTTGCAGTCAGCTCGTGCAGCACCCACTAACGGAGCTTCATTACCTCTCCAATTTGCTTCAAATGCTCAACGACCATAGAGCGGTCAATGCTGAGTTCTTCAGCAACTTCTTGCATACTTGTAGGAGGATCAGCTTCAAGGATTGCTCTCAGTTGGTCGGCGTCTACTTCTGCCGACCGGCCACTGCCCTCCTCGTTTTCAAGGCTCTCGTCTGCTTTGCCAAACTTCCGAACAAGCACTGCACTGTGCACTCGTTGGGAGTTGCCTGACCCAATGTGCTGCTGATGTTGCAAGTTGCCTCTGATGCTTTATGACCAATTTTGAATTCAAATAACAAAAACTGTTCGAATTTGCTTTTTGTCTAACATTATTTCTATAGTCTAAATAAATATAAAATAAGCAGCAAGTAATAATCATTAGCAAAAAAAATACAGCAAGAAATACATATTAAAATGATGTATATCACAACATTCAAGAACGTATTCCAGTATCAAACGTCAAAGTTCAACAAAGAAAAACCACAATTACTTTTGCACCAACCTA TCONS_00140422 TCONS_00140428 . 3' 7281 TCONS_00140422 TCONS_00140428 . 3' 8734 EMBV3_14584 CACCAAGGGTGTGTGCTTGGATGGTCGTAGGATGCTATGTCTTTGGTTTTCTGGAGGCCT Gene GeneID:509710|LOC509710:XM_002693801:124_cdna Constitutive 0 NULL GeneID:509710 15 GENE LOC509710 NULL similar to Olfactory receptor 5B12 (Olfactory receptor OR11-241) EMBV3_12810 AGGGGTGGGTTAGAGTTCAAGGTTTTTGTTCTACCAGATGTTTTAGTAGTAATCTGGAGG Gene GeneID:444874|UBC:XM_002694472:302_cdna Constitutive 0 NULL GeneID:444874 17 GENE UBC NULL ubiquitin C EMBV3_23161 CAAGACCAACTGGCAAATCTTAAAAGACAGGCCATCCGTGTACTGGACAGAGAGATTTCT Variant GeneID:788788|THEG:XM_002689159:178_cdna 463^534 1 EMBV3_01494 GeneID:788788 7 GENE THEG NULL Theg homolog (mouse) EMBV3_38128 TCACGCTATGGAATGTCTATTAAGACCACGCTACGGCCTCAGTGCCTTTAAACCAGCAAC Gene BVT0102_133215 + 1 EMBV3_36043 GK000007.2:55791190-55988739 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09027 AAAATACATTTGACATCGATTTGACCTTTGCAGGGGCCTCCTTCCCACAAGGTCCCCAGC Gene BVV0102_366211 + 0 NULL GK000019.2:35991036-36021125 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28193 TTCGGCGTCAAGTGGAGCAGAGGAGACGTCAGCCACAGAAGATGGGGGACAGGGTGGGTT Gene GeneID:533926|KPTN:NM_001076005:316_cdna Constitutive 0 NULL GeneID:533926 18 GENE KPTN MGC143096 kaptin (actin binding protein) EMBV3_01785 CTTCACATGAGCCAGAAACATACAGAGATGCTCCTGATTGCCTACAAGCCAGCCCCCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36866 AGGTTAACGTTGGCACTTGAGAAAAGGCTTCAGTAACCCAAACCCACTGCTCCAGAGAGG Gene BVV0102_447540 + 0 NULL GK000029.2:40924405-40927661 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15204 GGCACCGTGGCATTCGTAAGGCAAGATGGCTACAAGCTTCATGGCCGCACCATTAGACTT Gene GeneID:615521|LOC615521:NM_001078050:8_cdna Constitutive 0 NULL GeneID:615521 8 GENE LOC615521 NULL GrpE-like 2, mitochondrial-like EMBV3_27671 CTAGCAGGCCTTGGTCTTGCAAAGTTTAGGAGTAAGAAGGGCATTTCACCCTTTGGCTCC Gene GeneID:526041|LOC526041:XM_002692058:71_cdna Constitutive 0 NULL GeneID:526041 13 GENE LOC526041 NULL ankyrin repeat domain protein EMBV3_22623 GGGCTAGTGTCAATCAAAGACAAACCGCAACAAGTGATTGTCCAGGGTGTCCATGAGCTA Gene GeneID:100300568|LOC100300568:XM_002689621:30_cdna Constitutive 1 NULL GeneID:100300568 8 GENE LOC100300568 NULL hypothetical protein LOC100300568 EMBV3_20234 AGAGACCTAGCTTTCTGGTTCATGTAATGCACTGTTTAACTGTGTAGGAATGTATATCTG Gene GeneID:538769|NOG:XM_002695554:50_cdna Constitutive 0 NULL GeneID:538769 19 GENE NOG NULL noggin EMBV3_41211 AAATTTAAACAGCTGAAGATGCCAGTGCGGGCCTTGCTGAGATTGGCTCCTCTGCTCCTT Gene GeneID:535565|ANAPC1:XM_002691126:113_cdna Constitutive 0 NULL GeneID:535565 11 GENE ANAPC1 NULL anaphase promoting complex subunit 1 EMBV3_03150 AGTTCTTACTGGAATTGGTGCAGATGAGCAGCTTGCAGGTTATTCTCGTCATCGGGTCCG Gene GeneID:539672|ASNSD1:NM_001034680:42_cdna Constitutive 1 NULL GeneID:539672 2 GENE ASNSD1 MGC127470 asparagine synthetase domain containing 1 EMBV3_10420 AGCGCTTCGACCCCGAGACCAACTCTGACGCCCGGATGAACCAATGACAAATTTGGAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17917 CACAACATGCAGAGGCACTGAAGTGGCCAGATCATTTTCACGTGTCAAGAATGTAGACAG Gene GeneID:516629|LOC516629:XM_002691384:270_cdna Constitutive 1 NULL GeneID:516629 11 GENE LOC516629 NULL similar to RIKEN cDNA 1110067D22 EMBV3_21359 CACCTATGTGGCAGAAATGCTTATTTTGGTGGAAGCAGGTATCCTGGGGAGCAGTGCCTT Gene GeneID:532075|LOC532075:XM_002689074:87_cdna Constitutive 0 NULL GeneID:532075 7 GENE LOC532075 NULL similar to olfactory receptor 290 EMBV3_30878 AGGAGTGTATATGTCACCTGTGTATGAAGATGGCCCTGTCTGTGTCCCTACCACAAACGG Gene BVV0102_096688 + 0 NULL GK000007.2:13852934-13864093 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33439 GTGTGAAGCTTTTTCCGGCTGGGCAGAGTAGTCTTAGGCAGAAGAGCCTGAGAAGATTGA Gene GeneID:510678|POLE3:NM_001034390:17_cdna Constitutive 1 NULL GeneID:510678 8 GENE POLE3 MGC127045 polymerase (DNA directed), epsilon 3 (p17 subunit) EMBV3_34697 AGGAGGAGAAGTATGACATGGAGATAAGGGTGCAGAAGAGCACCAAGGAGCTGGAGGACA Gene GeneID:506434|TNNI2:XM_002699430:111_cdna Constitutive 0 NULL GeneID:506434 29 GENE TNNI2 NULL troponin I type 2 (skeletal, fast) EMBV3_11097 GGGACCAACTGGGCCAGCTCAGCTGCCTGGCTGCACAAGGACCTCCCTGGGGAGCTGGTG Variant GeneID:533578|NUDT22:NM_001038680:57_cdna 351^551 3 EMBV3_13393 GeneID:533578 29 GENE NUDT22 MGC134340 nudix (nucleoside diphosphate linked moiety X)-type motif 22 EMBV3_29799 ACCTTGAATGTGAGAAAATGGGTGGTGCCTGCAAGTATCAGAACACCCATGAGTGCGTCA Gene GeneID:100336287|LOC100336287:XM_002698632:2_cdna Constitutive 0 NULL GeneID:100336287 27 GENE LOC100336287 NULL hypothetical protein LOC100336287 EMBV3_11977 CTTTAGGTCTGGGAGGGCAAAAAAGAGGGAGGTAGGATAAAGCCTTTTGTTTGGGGGTGC Gene GeneID:540313|ETS1:NM_001099106:8_cdna Constitutive 0 NULL GeneID:540313 29 GENE ETS1 MGC152581 v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) EMBV3_15174 CAGTGGGTGCCCACCCTGCCCAACAGCTCGCCAGCCCGAGGTGCTGGTCCCCATCCGACT Variant GeneID:537412|SMARCB1:NM_001040557:88_cdna 615^739 1 EMBV3_43165 GeneID:537412 17 GENE SMARCB1 NULL SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 EMBV3_35776 GGAATGTATCCAACTTTCAGCACCAGCTCCAGAATGCTAGGTAGTTATCACCATGGACCA Gene BVV0102_292948 + 0 NULL GK000014.2:70416867-70728581 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20602 GTAAACACCTAAGGCAGGGACCTCGCCCCTTTTCCTGCCAGAAGATCATAACTAAGACAG Gene BVT0101_007327 + 0 NULL GK000030.2:110498334-110531878 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253500 1 XLOC_156440 NonCoding TCONS_00253500 XLOC_156440 NonCoding NonCoding - X:110530504-110531704 - TSS190721 1200 3 TCONS_00253500_2 64 0.121666666666667 1 0 0.000124718801509621 0.000200968730640834 0 4.15207783117946e-05 0 0 0 3.45024725834011e-05 3.28755168278232e-05 0 0 0 0 0 0.00038081422449025 0 0 0 0.000304764215337574 0.000281663965068619 0 0 0 0 0 2.93560761674068e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.0969470062069895 0.584574283566832 0.0435217101726943 0.373122006721137 GATGGAGGCCTAGGAAGAGCCTGACCACCCTCATTGTCTTGTGATCAGAAGGTTACAGAAGGGTTGTCGGCTCCATGAGGAGCAACGATGGAGAGAAGGCTCCCAGGCACCAGAGAGGATAAGATGGAAGTTCAAGGCAGAGTCTTTTGTGAGAACTGGGAAAAGAGCAAGCCATCTAGATTAAAAAAAATTGAAAACCTTCTGGATGGATATTCCCAGGGCCCTTCATCTAGCTAACAGACCAGACTGCTGAGGTGAGGAGAAAGCTGCCTTTCCACAATGAACATGGCCTCTACCATAGAACAGGGCTCGGTGACCCCAGAGGCGGCTGGATTTTAGCACCCTTGCCCCTTCCTCCAGGACCTTCGCTCGGAGCACATGGCACAACTGAATGCAGCAGCCCTAGTTGGAATCTGTCTTAGTTATGATCTTCTGGCAGGAAAAGGGGCGAGGTCCCTGCCTTAGGTGTTTACAAAAAACAAAAAAAAAGAGAGAGAGAGAGAGAGGGAGAGAAAGCCTCAAAGAAGAAACCAGATCCGTCCTGCAGGCAGCCGAGAAACCCTATCCTGACGCCAGCCTCCACGAGGGTGGAGGCTCCAGGCGGATCGTGGTGTGCTAGGGGTGTGAACAATCCAGGAAATGGGGAACTCTGATTGCAAGAAACTACAACAGCTGGATTCCCAGGCTGTGGGTGAGACGGGGAACTTTCTGGGCCTTGTGCTCGCCCATCAGCCAACCTTGGAAAGAGTACCTCAAGCCTCATCCCAAACCGCAGTGCAGCCGGCACACACCCGGGCCAGCCCTTGATTCATTCCTTCGCTAAAGAGAAACCAAAAAGCCATAGCACGGACGCTGGCGCCGGCGCAACCACACACCTAAGTTCAAATCTCCGCTCTGTCCGTAACCGTGGACCCGAGCAAGTTTCTAAGCGGCGTTTCTTTTCGGAGAGGGTGGGCATAATAACAGCAAACTTGGGGAGTGATCAGGAGGGTCAAACCCGCGAACTTGGCCATAATAACCTGCCGCGGTTGTCTCTTCTCTTTCCCGGCGACTCACCCAGCTCTCTGCATAGATGACATGGTGCTAGGGGCCCGGGACCTGGGAGGGGGTCGGGCAACCGGTGTGTGTATTTGGAGTGAAAGGGCGCAAACTGGGAAACCCAGAGATACTTTGGGATGGTTCGGTTTACTAGGGCACGCC TCONS_00245470 TCONS_00245471 TCONS_00245472 . 5' 175 TCONS_00245470 TCONS_00245471 TCONS_00245472 . 5' 175 EMBV3_03615 ACCTGCAAGTGAGATGAAGAGGTGTGTGACTTTGGGCTAGTGGTTTCTCCTTTCTGAGCC Gene GeneID:525675|MARK4:NM_001035359:280_cdna Constitutive 0 NULL GeneID:525675 18 GENE MARK4 NULL MAP/microtubule affinity-regulating kinase 4 EMBV3_37403 TGTGACAGCAGATGACTCGGGCTTGCTGTGTGTCTGGAGATCAGGGCCCAAATTCAAATT Gene GeneID:511447|WDR54:NM_001046086:23_cdna Constitutive 1 NULL GeneID:511447 11 GENE WDR54 MGC137245 WD repeat domain 54 EMBV3_38401 GATCCCAGCCTTGTTCCAGGCAAGAGACAGAAGCGGAATAAGATTGCCATTTTCCGGATG Gene GeneID:783646|LOC783646:XM_002685971:280_cdna Constitutive 0 NULL GeneID:783646 3 GENE LOC783646 NULL hypothetical LOC783646 EMBV3_18902 ATTAGCTTTTGTTTACACCCTGGAATTGACCCCTTCCTCCAGGGGACTTGGGAGGGGGAG Gene GeneID:540425|RARG:NM_001130756:51_cdna Constitutive 0 NULL GeneID:540425 5 GENE RARG NULL retinoic acid receptor, gamma EMBV3_10817 CAAGAGCAGCTATGGTGGGGCTGCCCCTGTGGACTTCCTTCGGAAGCAGAGCCAGCTGCT Gene GeneID:533859|PITPNM1:XM_002699366:281_cdna Constitutive 0 NULL GeneID:533859 29 GENE PITPNM1 NULL phosphatidylinositol transfer protein, membrane-associated 1 EMBV3_34761 GACATGCTGTGGTGCAGACTTGCTGAAGGCAGTGCGGTTATTTCCTGAAAACACAGTCCA Gene BVT0101_015455 - 1 EMBV3_42512 GK000017.2:60219-78742 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41326 GCCTCCTTTTACAGTTAATCCAGGAGAGGGAGTCCTTTGCCAACTGATGCCAGATAGTCT Gene GeneID:616545|SKAP2:NM_001038214:22_cdna UTR3_Alt 2 NULL GeneID:616545 4 GENE SKAP2 MGC128629 SCAP2 src kinase associated phosphoprotein 2 EMBV3_14429 ATCATACCAAGTACCTTTACCAGTCAGAATGGAGTGAAAGTAGAGATCAGTAGCAGGAGG Gene BVV0102_412506 + 1 EMBV3_19965 GK000024.2:39739324-40229541 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39974 GAGCTGGAGGGAGAATTTCAGGAACTGCAGAATTAAAGGCTGGTGGGTGTCTCACCACTA Variant GeneID:508790|TMEM120B:NM_001101908:102_cdna 178^659 1 EMBV3_11428 GeneID:508790 17 GENE TMEM120B MGC148653 transmembrane protein 120B EMBV3_17745 CTTCCCTGTAGGATGTCTCATGGAATATATACGACATTTTATTTAATCACTTCCAAGAGC Gene GeneID:541259|CDH10:XM_002696412:18_cdna Constitutive 0 NULL GeneID:541259 20 GENE CDH10 MGC142434 cadherin 10, type 2 (T2-cadherin) EMBV3_22672 CTTCTCACGTCTGGAGTCAGATCAGTGCTTGGAGTCTGCGTACAGTAGGGTAGGTAACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02527 GTCTTTATCTGAGGATACCTTCTTGCAGCCTATTTTCCTTCTACTCATTGTGCCGGGAAC Gene GeneID:515158|CCDC99:NM_001076854:11_cdna Constitutive 0 NULL GeneID:515158 20 GENE CCDC99 MGC142328 coiled-coil domain containing 99 EMBV3_37926 CAGAGCTGCTGTCTGAACCCAACCAGACAGAGAATGATGCCCTGGAGCCTGAAGATTTGT Gene GeneID:280932|SST:NM_173960:24_cdna Constitutive 0 NULL GeneID:280932 1 GENE SST NULL somatostatin EMBV3_13051 AGCCCCTGCCCACCACAGGGTCTCCTTCCAAGCCACTCAGGACATTTTTAGCTTGTTTTT Gene GeneID:516797|PPT2:NM_001035318:138_cdna Constitutive 0 NULL GeneID:516797 23 GENE PPT2 MGC138968 palmitoyl-protein thioesterase 2 EMBV3_39941 TCAGCAAACACTACAAGTCCACGGTGGGAGGGCAGGAGCGCTTCACCTCTATGACCCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14184 GGATTGGTATTTCTCAAGCAGAGCACCTCTGCCTCTAATAAACAGGAAATCAGTTTGGTC Gene BVT0102_256415 + 0 NULL GK000002.2:91613073-91621730 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105845 TCONS_00105846 TCONS_00105848 TCONS_00105847 1 XLOC_062654 Coding TCONS_00105845 XLOC_062654 Coding Coding WDR12 2:91620807-91624358 j TSS78002 1585 2 TCONS_00105845_2 64 0.152681388012618 5 0.554929577464789 4.32833184316648e-18 2.70338995980604e-29 2.03180987086051e-15 1.18275535274496e-17 9.48027665101524e-05 7.29974228526484e-20 4.55262132491173e-24 1.3122066198241e-16 1.19355552569677e-12 1.432573387379e-05 6.75316396167466e-06 0.000116990383848607 4.57417845019703e-30 8.12052548654152e-06 6.30737941375825e-18 0.00129881522249327 0.00199139183640174 2.89286678168104e-07 0.000252805963197199 2.57845969102631e-10 6.21244819800967e-11 0.000800119028718098 0.000814665912314812 0.00229704947159343 7.41385459946559e-18 8.44361277046567e-10 1.19635060478639e-15 0.000254853368254232 4.44743305808331e-08 1.11901484803322e-08 NM_001075907.1 WDR12 Bos taurus WD repeat domain 12 (WDR12), mRNA. 0.0 1193 100.00 0.416403785488959 NM_018256.3 WDR12 Homo sapiens WD repeat domain 12 (WDR12), mRNA. 0.0 663 84.94 0.380441640378549 TCONS_00105845_1 sp|Q0VC24|WDR12_BOVIN WDR12_BOVIN Ribosome biogenesis protein WDR12; 3e-34 122 100.00 0.982758620689655 1 noncoding 0 0 0 0 -1.03351020345773 0.158043639885924 -0.0803860391680679 0.135209408154893 GGCATCTGGAAGTACAGATAGGCATATCAGACTGTGGGATCCCAGAACTAAAGATGGTTCTTTGGTGTCGCTGTCCCTAACCTCACATACAGGTTGGGTAACATCAGTAAAGTGGTCGCCTACCCATGAACAGCAGCTCATTTCTGGTTCTTTAGATAACATGGTTAAGCTGTGGGATACCAGAAGTTGTAAGGCTCCTCTCTATGATCTGGCTGCTCATGAAGACAAAGTTCTGAGTGTAGACTGGACAGACTCAGGGTTACTTCTGAGTGGAGGAGCAGACAATAAATTGTATTCCTACAGATATTCACCTACGACTTCCCATGTGGGGGCGTGAAAGTGAAAGATAAATTTGCCTACAGAGATTCCTTCTATAAATAAAATCAATAGAGAATACTCAGCTAACACCAATACAGATACAGGAAGCAGTGTTTTAGATTAAAGTTAATATACTGTTTCACCCTTGATGATAATTATCACTGTCTTTTTACTTTGTATTTATTATACAACAGTTGTGTTTATTAAATATAAAACATATCCTGCATTCTCTACCTTATGAAAACCTTTGAAATTAAACTGAGTTTTTAATTTCTTTTCTAAAGGTATTGGTTTGAATTACGATTTGCTTTTGAAGTCCTATAAAAGTATGTATTAAAAGTTCAGTAATTGTTCAGATTTTTATTTCTGAGGGAGAAACTTCACTTTTTAAAGTTAGCATTTAAAAAAAAGCACCTAAAAAGTAATCAATTTTAACTGAAAAAATCAGAAATACGATCTGTGTTTGGTAAAAATGTGATTCTGTAACTGTAATAATGTTCTTTGTAAGTATTCATTAAAACATGTAGATGTTGCCAGTTATTAAGAACTTGTTGAAATATTTTAAGTGAAGTACTTTGTTTTAAAGATAAGTCAGGGCAGTTCCCTAGCGATCCAGTGGTTAGGACACCATGCTTGCAATGCTGGGGGCCAGGGCTCTGTCCCTGATTGGAGAACTAAGATCCCACAAGTTGCATAACGTGGCCAAAAATATAATAAATAAAAGATTTAAAAAATACATAAAGACAAGTCAGAATCCTTTAGAAATAGCATACAGATTCCATGGTAACCAGGAATCTCTCTCCCATACTTATATTTGTGTATAGATAAGAGTTCTTCAGACAAAACCTTTCAGTAAGCTTTAGGTTAAAAACAGTCTAAAATTTTTGTATCATTAGCACTTATCTAAATCCATTTATTATATGCCAGATATTTAAATGTCTTAAAATGTGACTTTAATGGATTGGTATTTCTCAAGCAGAGCACCTCTGCCTCTAATAAACAGGAAATCAGTTTGGTCTCATCATTAGACTCTAATGCTATGTCTCTCATATGAGGTTTCCTATTACAGAGGTCTAGGAAACAACCAGAGTAACCTGGCTGCAACTGAGAGCCAGACTGACAGTGGATTAAACCATGTGAATGATTAGTCCTCTACAAGTTCAGAGGCAGTCCAGTACTGTTAAAGTGGTTTTGTTCCACACTCCTTAGGGACCTGCACTCCCTCTTGACCCTGTGTTTCAAAGGACAACGATGAATTTATATTCGT EMBV3_10275 AAGGCGACTCCGACGCTCCAACTACTTCCGCCTTCCTCCCTGTGATAATGTGAATTTGCA Gene GeneID:281908|MFAP5:NM_174386:13_cdna Constitutive 0 NULL GeneID:281908 5 GENE MFAP5 MAGP2 microfibrillar associated protein 5 EMBV3_01438 GTACTACATAGGAATCCTTAGGGGTCGTCCATGAAAAGTGTTTTCCTCTTAAGTCAAAGG Gene BVV0102_033382 + 0 NULL GK000030.2:38261791-38362197 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246743 TCONS_00246742 TCONS_00246744 1 XLOC_151108 Coding TCONS_00246744 XLOC_151108 Coding Coding LOC100848079 X:38360395-38397880 = TSS184943 2952 1 TCONS_00246744_1 352 0.15650406504065 9 0.921486500907054 8.75699125912064e-05 8.50939446940814e-06 0 9.79947316248966e-06 7.79190493750902e-13 6.94591902530982e-13 5.92579630372358e-06 7.81413519733754e-05 3.35275576517238e-05 4.99094903448836e-20 5.02167252520714e-11 1.40749128349407e-06 8.988030551323e-13 7.32456816117123e-06 6.26888329433038e-06 0.00189499805024373 0.00050335375868721 0.00122139468758304 3.06546496309135e-05 2.62834616703284e-12 2.36031608428102e-06 0.000228145925568031 0.000211652384547168 0.00054295132112296 8.16870017679345e-06 1.45444524209113e-12 4.55332421195499e-06 2.57783393387596e-09 3.04948581973907e-05 1.00171033889481e-05 NM_001076064.1 TMLHE Bos taurus trimethyllysine hydroxylase, epsilon (TMLHE), mRNA. 0.0 1804 100.00 0.338414634146341 NM_018196.3 TMLHE Homo sapiens trimethyllysine hydroxylase, epsilon (TMLHE), 0.0 1739 84.89 0.51050135501355 TCONS_00246744_1 sp|Q0VC74|TMLH_BOVIN TMLH_BOVIN Trimethyllysine dioxygenase, mitochondrial; 0.0 664 94.93 0.946022727272727 1 coding 0 0 0 0 0.00512784306548683 0.970607898739618 0.0247105715529644 0.67796687515095 ATGATGAGCAAAATAGAAACAATTCTTGTTCTTGTGAGACTCAAAGTTAGGAGAAATACAAAGGATCATAAGAGACTACTATCAGCAACTATATATCTAAACATAAGACCAGAAACTATAAAACTCCTAGAGGAAACTGTATTCTTTAACTGGCCAGATGGTCATGTGACTAGATATGATTTGGATTGGCTCATGAAAAACAGCTATGAAGGGCAGAAACAAAAGGTCATCCAGCCTAGAATCTTATGGAATGCTGAAATCTACCAGCAAGCCCAAGTTCCAGCTGTAGATTTCCAGACGTTCTTAGAAACCAAGGAGGGACTGAAGAACTTTCTGCAGAACTTTCTGCTCTATGGAATTGCTTTTGTGGAAAATGTCCCTCCTACTCAGAAACACACAGAGAAGCTGGCAGAAAGGATCAGCTTGATCAGAGAAACCATCTATGGAAGGATGTGGTTTTTCACTTCAGACTTCTCCAGAGGTGACACTGCATACACCAAGCTAGCTCTGGATCGGCACACTGACACCACCTATTTTCAAGAGCCCTGTGGCATTCAAGTGTTTCACTGTCTTAAGCATGAAGGAACAGGTGGCAGGACACTGCTAGTTGATGGATTCTATGCAGCAGAACAAGTACTTCAAAAGGCACCTGAGGAATTTGAACTCCTCAGTAAAGTGCCATTGAAGCATGAATATATTGAAAATGTTGGAGAATGTCAAAACCACATGATTGGGGTTGGGCCAGTCTTAAATATCTACCCATGGAATAAAGAGCTCTATTTGATCAGGTACAACAACTATGACCGGGCTGTCATAAATACTGTACCTTATGATGTTGTCCATCGTTGGTATACAGCACACCGGACTCTAACCAGAGAGTTGAGGAGGCCTGAGAATGAGTTTTGGGTCAAACTCAAGCCTGGCAAGGTACTATTTATAGACAACTGGCGTGTCCTACATGGCAGGGAATCCTTCACAGGCTACCGCCAACTCTGTGGCTGCTATTTAACAAGGGATGATGTATTAAACACTGCTCGTCTCTTGGGCCTTCAGGCTTAAAATTGATGGCATTGAGATTATGAACATACCTGACACCCTGGCTATCAGAATTTCATTTCATATCAGCAGAATAATATTATGTCAATACCGACTTCAAATTGTCTCATGTCATCACGTGAAACTAAAGCCTCCCCTTTTTCTAGTAAGGAAAACCTTAGAGATAGGCCATCTCGTATGGTATCTCTCTTCCCCAAGTTACAACATGGACTCGTTTGGTTTTTAGATCTTTTGATGTAATTTTGGTCAATCTTCTTCAGAAATATAATCATCACATTGATGAGAATCAATAATAGTCACTAGGTAAAAATTTGTTTCAACAGGATCTGTCAGAAAGAAGAGCATTATAGGAATAACAGAGTCTAACTAGAGCAGAAATTTGCAACATTTTTTGGTCTTAAGACATCTAAACACGTAAACGTTATTGAGGACACCAAAAGGTGCTTAGATGTGGGTTATATCTATTGTTACTAATTATATTAGATATGAAGACTTAGAAATATTTAAAATTTAAGAATAAAAAAGCATACATCCATCAGAGAGATGACTTTATCACATGTCATATAGCCTCTGGAAAAGTCTTCTGTACATTCATTAGATAATTAAATGGAAAAGGCAATATCATCTTAATATTGTTATTAAAAATATTTTATTGATAATACATAGACCCACTAAAAGAATCTCAGGGACTGTTCCAGGTGTCTTTAGACTACACTTTTGAGAACCAGTGGCCCAGAGCAGCAGTCCCCAAGCTTTTTGGCACCAGGGGCTGGTTTCATGGAAGACAGTTTTTCCAAGAACTGGACCAGGGTGGCAGGAGTGGGGGGTGTGTGGTTTCGAGACAATTCAAGTACAACAATGAGCAAAGGCTGTAAATAGGAAGTTTCGCTCACTCACCCACTGCTCACCTGCTGCTGTGTGGCCTGGTTCCTCACCTGGTTAGGGACCCCTTGGTTTAACTGAAACCTTAAATTTTTCTCTGTGGTCTCCTAGAACTATAGATATTGTAGGAATTGCTTCATAGCACAAGCTCAATGATAAGGTGGGAACTGAATACATAGTATTTTATCTTGTGAGAAGAATTATCTCTTCTAAATCATCTCTCGAGGAGTAAAACTAAGAAATCACAATAGTTCCTGTGGAACAAACCCATCAGTTTGGTAATTCTGTGAGGGATAATTGCACAAAGGTTTTAGAGATTTCTGAGGTTCCATATGATAATTCACATATGCACATACATACACACATACATGTGCATGCCCACATGCACACAAAACAGTAAGTGGAGATTACTATCCAAACTTGCATTTTAATTTTTGAAGGAATTTAGGATGCAATATTTTCCTCCATTTCTACTGCTCTCTTTTTCTGTCTTAAAATATTATACATATCAACTGCCAAGATTTGGCTGGGTTAAGTATACTTTGTTATTTATTTTTAATGATTTTCCTTTATATGTGGAGAGAGAGAGGGAAAAAGAGACAGAAGGATAGATGTGAGATTTATTTTCTCTTGGCTTTCATTGAAAATGAAGTTGTACAATAACCACATTGACTGCTATAGAATGATGTAAGACAATCCAGGCTAGGATGTATGTAAGAGGAAAAAAGCATTATTAGTGAGGATAGAAGTCACAAATCAAAGTCAGTATTCTCTGACAGGGAATAGAGCCTAATCTGATGTTTACAGAAAGTTCTTAATTCACATTTAACAATTTATACATTATTTTATTGACCCATCCAGGGCACAAAACTATGTTCTCAAATATTTCTGCATTTTAATTGTACTACATAGGAATCCTTAGGGGTCTTCCATGAAAAGTGTTTTCCTCTTAAGTCAAAGGATTGATGATTAAGTTCATGTATTAAAGAGTATTTGTTGTTGTTTAGTCACTAA EMBV3_16126 CAGGTCAAAAGAAAGGGCCCGGATTTTCCATCTACCTCACCAGAGAACAATTGGACAGCC Gene GeneID:529552|CYP7B1:XM_002692695:109_cdna Constitutive 0 NULL GeneID:529552 14 GENE CYP7B1 NULL cytochrome P450, family 7, subfamily B, polypeptide 1 EMBV3_41759 CCCCACTCCTGGCCCCAGACCATGCCGTAGGATGGACTCGCTGCAGAAGCAGGACCTCCG Variant GeneID:616048|DUSP13:NM_001163944:405_cdna 92^181 1 EMBV3_25781 GeneID:616048 28 GENE DUSP13 NULL dual specificity phosphatase 13 EMBV3_26186 AAATATTCCTGTCCCCAGACCCACCTGATGCAGCTGTCCTTTCTCTCAGCGCCCAAGTTA Gene BVT0102_231489 - 1 EMBV3_19998 GK000006.2:14419295-14425501 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40586 CTGGACAATGTGGACCCCAACCCTGAGAACTTCGTGGGGGCTGGAATCATCCAGACTAAA Gene GeneID:784636|AP2A1:XM_002695121:616_cdna Constitutive 0 NULL GeneID:784636 18 GENE AP2A1 NULL adaptor-related protein complex 2, alpha 1 subunit EMBV3_28692 CACTTGCTGCAGGACGACTTGGAATATCTCCCTAATAAGCACGCAGGGTCTGAGCAGGTT Gene BVV0102_031236 + 1 EMBV3_43217 GK000019.2:51155594-51207150 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100693 1 XLOC_060935 NonCoding TCONS_00100693 XLOC_060935 NonCoding NonCoding - 19:51174802-51175421 - TSS75069 619 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000187748079808675 0.000405345889410103 0 0 0 0 0.000133386749104236 0.000433333341357212 0 0 0 0.000248275516291265 0 0 0 noncoding 0 0 0 0 -0.0106845658663766 0.917154221578757 0.0069762800863853 0.884406374726598 CGGCCGACCGAGGTCTGTTTCGTGGAAGTGAGTTCTTGCGTTGGCCACGATCCGGCGGGACGCTGGGGGATCTGGAGAGTTGCGGAGACGCGAGAGGCGCCAGCTTGGACTACGCGGCACTTGCTGCAGGACGACTTGGAATATCTCCCTAATAAGCACGCAGGGTCTGAGCAGGTTCCTTGGCGTGGTGATCCTGACGTCCTGAGTCACCAGTCCCGAGAAAGCCCGGCCCAGGGGACCCGCCCAGAGACCGGCGATACGGACATCAGGCCTCTCTCGCAGTCCCACCGCCTCTTGGCCCCCTCAACGTGACAAGGACGCGCCCCTGGAAGGAGCACAGGGGCTCGGGATTAAATACCGGACGTTTATTGACAGCCAATACACTTACTGTAAAGTTCACTTATTTAAAGTGTGCGCTTTTGAACCAGCTTCCTTTCCTTAATCAGTTTCTAGAATTTGCATTTCTCTAGTTATGCTGCAAGGCTTGTCTGTGAGGGTTGAGGGTGTTAAGATATAGTGCAGTTGTGGTTTGAGAAAGTGTGAGAACACTCAGTCTCCTGAAAAATGTCTAGGCTTTTGGTAGCTGTAACAATATTATCAATAATAAATAAGTAAAGCG TCONS_00094334 . 3' 19210 TCONS_00094334 . 3' 19828 EMBV3_38741 CGCTTTCTACCTGCCCGGCCTGGCGCCCGTCCAAGCATCAGAAGGAAAACGGCCATCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18104 CAGGCTTATCGCAAGGATGATTTCGTTATGGTTTTGCTAGTGGAAGACTCAGAAAAATAT Variant GeneID:617430|C2H11orf70:NM_001046598:26_cdna 206^448 3 EMBV3_36085 GeneID:617430 15 GENE C2H11orf70 C11orf70 MGC127886 chromosome 11 open reading frame 70 ortholog EMBV3_00987 AGTTCGGTTCCCAGATAGATTAACACCACAGACACGGCAGATCCTTAAGCAGCACCTACC Gene GeneID:540083|DNAJB5:NM_001014959:62_cdna Constitutive 0 NULL GeneID:540083 8 GENE DNAJB5 MGC143132 DnaJ (Hsp40) homolog, subfamily B, member 5 EMBV3_04793 CTCTATATCTACACACACCAGCGGCCTGTTGTCCCAGATCCACAGATGGAGGCCACCGTA Gene GeneID:751573|UCN3:NM_001076527:9_cdna Constitutive 0 NULL GeneID:751573 13 GENE UCN3 NULL urocortin 3 (stresscopin) EMBV3_30210 GCAGCTTCAGGACCAAGGCAACAAAATGTTACTGGACTCAGTTCTTACCACCCATGAGCG Gene GeneID:615873|MRPL48:NM_001046563:19_cdna Constitutive 0 NULL GeneID:615873 15 GENE MRPL48 MGC133957 mitochondrial ribosomal protein L48 EMBV3_30104 AGATAGAAGGGACACCATTAGAAACCGTCCAGGAGAAACTGGCCACACAAGGACTAAGGG Gene GeneID:100335587|LOC100335587:XM_002689190:54_cdna Constitutive 0 NULL GeneID:100335587 7 GENE LOC100335587 NULL NADH dehydrogenase-like EMBV3_10180 GATCGACTGAGTCTCTATAATCATACCCACTTCTGAGAATGCAGCTTTACAAATCATAAG Gene GeneID:100270749|ZNF389:NM_001145131:2_cdna Constitutive 0 NULL GeneID:100270749 23 GENE ZNF389 NULL zinc finger protein 389 EMBV3_30066 TTTCCTTCTTTGCAGAGATATCTCTGACTCTTCTCTCTGATGGGTACTAAATTGGAAATA Gene GeneID:508445|HCLS1:NM_001035057:47_cdna Constitutive 2 NULL GeneID:508445 1 GENE HCLS1 MGC127454 hematopoietic cell-specific Lyn substrate 1 EMBV3_34890 CCTGTGGCCAAGTTCTTAGTGCTGTGTGTCATTGTAGGACCGTAGAAAAGGGAACTGAAC Gene GeneID:281736|CXCR4:NM_174301:2_cdna Constitutive 0 NULL GeneID:281736 2 GENE CXCR4 MGC128682 chemokine (C-X-C motif) receptor 4 EMBV3_20296 AACAATTCTGTGCGGCTCTGGCAATGTGGAGAGGGCTTCCGGCAGCTTGACCTTCTCTAT Gene GeneID:614025|RRP9:NM_001102273:274_cdna Constitutive 0 NULL GeneID:614025 22 GENE RRP9 MGC166437 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) EMBV3_18823 ACCCTGGTCATCTTGGGGACTCTGTATCTTCTGTTGGAGAACCATCTGTGTGTGCAAGAG Gene GeneID:538759|GPR81:NM_001145234:246_cdna Constitutive 0 NULL GeneID:538759 17 GENE GPR81 NULL G protein-coupled receptor 81 EMBV3_11802 TATTGAGCACAAGAAGAGCAAGAAGGAGGGCATAATGGGGAAGCTCACACCCAGGGCCTC Gene GeneID:515588|SNUPN:NM_001038546:94_cdna Constitutive 0 NULL GeneID:515588 21 GENE SNUPN MGC134006 RNUT1 snurportin 1 EMBV3_20336 TAATTTGAAAGGGTTGAAAAAAGGCAAAAGCAACCCAAAGGTCCAGGTGGAGGCCATTGA Variant GeneID:520650|SIL1:NM_001075808:235_cdna 480^893 1 EMBV3_02688 GeneID:520650 7 GENE SIL1 NULL SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae) EMBV3_08174 TCCCTCCCTTGCATTGGGACAGGATAGGGAAGGTGCTAGGCACTGACCACTAGGCATTCA Gene BVT0102_416389 + 0 NULL GK000013.2:38163027-38182322 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25533 CCGTATCCTGCCTGTAGTGAAAATGGAAATGAAGCAGAAGATACCATTCCAAAGAGGGCG Gene GeneID:613635|C22H3orf14:NM_001046510:11_cdna Constitutive 0 NULL GeneID:613635 22 GENE C22H3orf14 C3orf14 MGC137829 chromosome 3 open reading frame 14 ortholog EMBV3_13921 ATGGAAGAGATTGGGTTCTTGGTGCTTGGCATGAGGGTTTATCATGTTCATTCTGATAGC Gene GeneID:615135|IPMK:NM_001035462:100_cdna UTR3_Alt 2 NULL GeneID:615135 26 GENE IPMK MGC127168 inositol polyphosphate multikinase EMBV3_42284 CAGATATGCTGCTTGTAGGCAGGAAAACCAGAGGAGTCACCGCCAATCTGAGGGGTTTTA Gene GeneID:282337|RASSF2:NM_174593:14_cdna Constitutive 0 NULL GeneID:282337 13 GENE RASSF2 NULL Ras association (RalGDS/AF-6) domain family member 2 EMBV3_05604 AGTTCCACTTCACCAACAAGGACCTGGACTCTCTCAAAGGCCTCTACCGCATCATGGGCA Gene GeneID:533865|MED25:NM_001082445:313_cdna Constitutive 1 NULL GeneID:533865 18 GENE MED25 MGC148420 mediator complex subunit 25 EMBV3_36047 GGGGAAGCCAGTCTCCACGTGCTCGGTCTTCACTACATTACAGTGCATCTTCTGACACAT Gene GeneID:535628|ZNF750:NM_001081533:114_cdna Constitutive 0 NULL GeneID:535628 19 GENE ZNF750 MGC155113 zinc finger protein 750 EMBV3_17361 GAGCATGTTCATGGTGCTCTTCGTGAATGAGAGTAAGCCTGGGTTTCAGCTTTGCCGTCG Gene GeneID:100294754|LOC100294754:XM_002699214:35_cdna Constitutive 0 NULL GeneID:100294754 29 GENE LOC100294754 NULL hypothetical protein LOC100294754 EMBV3_03169 GTGCACAGCAACAAAGAGTAGCCCTGCTTACCGCAACTAGAGAAAGCCCATAGGCAGCAA Gene BVV0102_156868 + 1 EMBV3_43436 GK000008.2:76531322-76540580 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29129 GAGAATTTAAACTTACTTAGTTGATGCCACAGAGAAAGCAATGGCACGCCACTCCAGTAC Gene BVV0101_022854 + 0 NULL GK000014.2:58175904-58362817 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40848 AGCTGCTGAAGCGGAAACTTCAAAGCCTGCCTGATTTACACGACAGCTACGTGATGCAAC Gene GeneID:100295923|LOC100295923:XM_002685171:190_cdna Constitutive 0 NULL GeneID:100295923 1 GENE LOC100295923 NULL hypothetical protein LOC100295923 EMBV3_33490 ATAATGGATCATGCGATATCAGTATGGGAAATGTATGACATGGTTTAAAAAAGAACTCAT Gene GeneID:534991|STMN2:NM_001034622:40_cdna Constitutive 2 NULL GeneID:534991 14 GENE STMN2 MGC128538 stathmin-like 2 EMBV3_39782 GTCTCTAACCTTCATGGTCTGGTTTCGGCTTACACCTTCGTTTCCATCTCTCTTCACGCC Gene BVV0102_128693 + 0 NULL GK000010.2:98338826-98704320 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43690 CAGGCATTGTGAAGGAAGCAGCAAGAAATCTGACAAACGGCCTCGAGAATACGCCAACAC Gene BVV0102_036351 + 0 NULL GK000017.2:25413143-25474595 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076821 1 XLOC_046927 Coding TCONS_00076821 XLOC_046927 Coding Coding - 17:25443144-25446903 - TSS57596 689 1 TCONS_00076821_1 79 0.175616835994194 3 0.817456093666844 0 0 0 0 0 0 0 0 0 0.00099726954960168 3.98696124528992e-05 5.18968659884206e-06 0 0 0 7.66661501848621e-05 0 0 0 0 0 0.000119818520274371 0 0 0 0 0 3.25283983551044e-05 6.41172170358684e-05 0.000349042224685792 XM_005194971.1 LOC101902151 PREDICTED: Bos taurus HERV-W_7q21.2 provirus ancestral Env polyprotein-like (LOC101902151), mRNA. 0.0 744 100.00 0.596516690856314 XR_106755.1 Gm19951 PREDICTED: Mus musculus predicted gene, 19951 (Gm19951), misc_RNA. 3e-06 57.2 70.40 0.175616835994194 TCONS_00076821_1 sp|Q9N2K0|ENH1_HUMAN ENH1_HUMAN HERV-H_2q24.3 provirus ancestral Env polyprotein; 4e-12 62.4 63.04 0.556962025316456 1 noncoding 0 0 0 0 0.00620131498474896 0.968675091291645 0.00772929074346751 0.876449622470106 GCTCTGGGACGTGACTCTCCACTTGCCTTGTGACTGACATCCACTCACCGGCCCACATTTCATCCATCAGTTGCAAGACTAGATTCCCTGGCAACCATGGTCCTCCAAAACAGAAGAGGATTAGACCTCACAGCAGAAAAAGGAGGCCTATGCCTATTTTTGGAGGAAGCCTGTTGGTTCTACACCAATAAATCAGGCATTGTGAAGGAAGCAGCAAGAAATCTGACAAACGGCCTCGAGAATACGCCAACACATCAGCAGTACATGGGAAAACTGGGATCGCTTACAAGCCTTCACCAACCAAACTATCTACAAGCTACTTCGAACTCAATCTGATTATCAAAAACTTCTCAAAGCTGTGAGGCCACCAGATTCCAGATCTCCAGCTATGTGGAGAACATCCCTTCAGAGAATTTTTCATTGGTGGGTATAAGAAGGACTCCATCAGAAAGGGAGGATGCTACTTCTCCTTAAGAGCCAATCACCCTCTCTTTTCCCTCTAATAAATTTCCCTTTTCTTGCCTGATTGCTTGGCTCACTCGCTTTTTCTTTTGCATTCACCTTACAGTAAAGTGATTTGGTATTCCTATCTCTTGAAGAATTTTCCATAGTTTGTTGTGATCTACACAGTCAAAGGCTTTCGTGTAGTCAGTAAAGCAGAAGATGTCTTTCTGGAATCTCTTGCTTTT TCONS_00076822 TCONS_00076823 s 3' 9319 TCONS_00076822 TCONS_00076823 s 3' 5972 EMBV3_02182 AGTGTGGTTCAGGGCCTGTGCATATCAGTGGACAGCACTTAGTAGCCGTGGAGGAAGATG Gene GeneID:784385|LOC784385:XM_002694024:15_cdna Constitutive 0 NULL GeneID:784385 16 GENE LOC784385 NULL similar to nucleophosmin 1 EMBV3_35632 CAGTGGCAGCGCTGCTGCTGAGGCGGAGAGGCGCAGATGCGGTGGCGACAGGTCACTACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01444 CGGGGGAAATGGCGGCGACGGCGGCAGCGGCGAACTGCTGTCCCACACCGTGGAAGAGAA Variant GeneID:512756|COPS6:NM_001101963:158_cdna 45^273 1 EMBV3_17081 GeneID:512756 25 GENE COPS6 MGC159502 COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) EMBV3_40744 TAGTGCCATCTAGGAAGCCCTCCCTCACTGCTAAGAGACTTTAACCCAAACCAGGCTGAT Gene GeneID:513112|CES3:XM_002694809:663_cdna Constitutive 1 NULL GeneID:513112 18 GENE CES3 NULL carboxylesterase 3 EMBV3_32701 ACCCACAAGAATTCCACTGAATCTGGAAGAGGAAAGGGATTGACGGTGCTCACTGAACCC Gene GeneID:615508|TPRG1:XM_002684838:181_cdna Constitutive 1 NULL GeneID:615508 1 GENE TPRG1 NULL tumor protein p63 regulated 1 EMBV3_26437 GCACTGATTTAAAGGATGGAAATATGGAAGCTTGTAGCTAGTGTCTATCAAATCAGGGTG Gene GeneID:507597|NPL:NM_001045978:17_cdna Constitutive 2 NULL GeneID:507597 16 GENE NPL MGC137867 N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) EMBV3_19262 GGAGTCGCATCCTCAAGGCCGGGGGCAAGATCCTCGTAAGGGCCGAGAGGTGTACAGGCA Variant GeneID:509163|RPL18:NM_001015556:163_cdna 382^445 3 EMBV3_30118 GeneID:509163 18 GENE RPL18 MGC129138 ribosomal protein L18 EMBV3_42367 GCCCTTTGAAACTCTGCATGGTCCACTGGGGTTGTATCTCTTGAGCTTCATTTCAGGCTC Gene GeneID:538836|CLRN1:XM_002685021:186_cdna Constitutive 0 NULL GeneID:538836 1 GENE CLRN1 NULL clarin 1 EMBV3_25306 CAGCCAAAGAAGAGGTGGACATTAACAAAGGGGTGTCTGTGCTCACTACATCTGTTGCCC Gene GeneID:787535|LOC787535:XM_002687449:247_cdna Constitutive 0 NULL GeneID:787535 5 GENE LOC787535 NULL similar to olfactory receptor MOR114-11 EMBV3_38641 TGGAGACCCTCAGCAACATAGTCTCCTTGGATATCTCTCATATGCATGTGATCAAGAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33694 GGAGGAATTCATGAGCTTTTGTTCCTTGTGCATAGTGCCCTTAGTTCTCTTGGCCTCTAA Gene BVV0102_116429 - 1 EMBV3_37292 GK000011.2:65826763-66471948 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028114 TCONS_00028113 TCONS_00028111 TCONS_00028112 1 XLOC_015411 Coding TCONS_00028112 XLOC_015411 Coding Coding C1D 11:66467045-66490145 j TSS19787 5257 1 TCONS_00028112_1 141 0.138291801407647 6 0.772674141737738 0.000320152181342259 0.0003300693693258 0.000143260102706499 7.86700881371818e-05 0.000196554433411018 6.23683247259639e-05 3.0366480207862e-07 0.0001592017692056 0.000626552270630201 6.46258592100389e-06 9.38187340952131e-07 5.53302170332413e-06 7.37030670271479e-09 7.61500078421887e-05 1.14204537377665e-08 0.000967595568978787 0.000987295963985242 0.00203144528428462 8.82281558115668e-05 3.19128037431012e-05 0.000115374924444534 5.94681391850971e-09 0.000719038469650188 0.000306841342817418 7.89904062409328e-06 2.85326894384195e-08 5.36476156140323e-05 0.00012331484588234 1.23396284698575e-10 2.31178005125666e-15 XM_005212844.1 C1D PREDICTED: Bos taurus C1D nuclear receptor corepressor (C1D), 0.0 7384 99.98 0.779151607380635 NM_006333.3 C1D Homo sapiens C1D nuclear receptor corepressor (C1D), transcript 0.0 695 84.20 0.123834886817577 TCONS_00028112_1 sp|Q32PE4|C1D_BOVIN C1D_BOVIN Nuclear nucleic acid-binding protein C1D; 4e-101 290 100.00 0.99290780141844 1 coding 0 0 1 1 0.0628550189504892 0.848140012762945 0.0487181383892855 0.433718991593605 GAGTAGCTTTCCCTTGTCATCCGCCTTTATCATTTAGTTGATCATAATGGCAGGTGAAGGAATTAATGAAGACTATCCAGTAGAAATTCATGAATATTTATCAACATTTGAGAATTCCATTGGTGCTGTGGATGAAATGCTGAAGACCATGATGTCTGTTTCTAGAAATGAGTTGTTGCAGAAGTTGGACCCACTTGAACAGGCAAAAGTGGATTTAGTTTCTGCTTACACATTGAATTCAATGTTTTGGGTTTATTTGGCAACTCAGGGAGTCAACCCCAAGGAACATCCAGTAAAGCAGGAACTGGAGAGAATCAGAGTATACATGAACAGAGTCAAGGAAATAACAGACAAGAAAAAGGCTGGCAAGCTGGACAGGGGTGCGGCTTCAAGATTTGTAAAAAATGCCCTCTGGGAACCAAAACCTAAGAATGCATCCAAAGTTGCCAATAAAGGAAAGAGTAAAAATTAACCTTTCAGTTTCAATGTACACATATTTAAAAAGTACATAATTTTTATTGTTTTCCACAAAATGAATGATGATTATGTGGCACTGTAAGGTTTAAAAGTATTCCTTACTGGAATCATGTACAAAACTTGCATTTGAATTTGTAATGCTAAGAACTGTTTCCTCCAGAAAGATTGTTATCTTTATTGGTTTTCCTATAGAACACTATGAGGTTTTTAACATTGTAGTATGTGTGTGTGTGTATATATATATATAAATATTTTATTTTGTATGGGAGTATAGCTGATTAATAGTGTGACAGTTTCAGGTGAACAGCGAAAGAACTCAGCCCTACATGTACATGTATCGATTCTCCCCAAACTCCTCTCCCATCCAGGCTGCCACATAACACTGAACGGAGTTCCATTTGCTACACAGTTGGTTATGCATTTTACATTTATGCATACATTTACAGCAGTGTGTACATGTAATCCCAAGCAAAATTGTAGTGTATTTTATATTTATACTTTACTGTCTCTTGACCAGACTCTGATTTGCTTAGGTCAGTCTTTCATGTGCCATTTTATAAGCAACTATGAAGTTTAAGTTAAATGTTCCTCGTAAACATTTGTCTATTTCGATGAATAATGATTTTATGAAGTATGCCGAAGTTATAAATACATCTGTTCTCACTATATAATATTAAGAAAGAGTGAAATGACTTAAATGTCCATTTTTTTCTGTGTAGTTATTTCATTATGCTGTCATGATTTTGGGAATTACTGCTTTTTGTGATATTTGAAGTATGAAATTAAGACTTTAAGGTTATTCTTTAATTCTTGGCACTTTGCCACGATGTCCCATTTAAAGTAAAATACATTCTCATTAACTTTAGATAGGAAATGAGGTTGTATATTGATGGCTGAATTTTGGCATAATAGCTATACCCTATCAAAGCTGTTAATGCATGGCTGACCTGTTTTTTATTTTTCTCTTTTGCGTAAATTTTTCCTTGAAATCAGGAAGGTAGGTTTTAGAAGTCCTTAGAAATGGAGGAATTCATGAGCTTTTGTTCCTTGTGCATAGTGCCCTTAGTTCTCTTGGCCTCAATTTTTTCAGATGTTTTTAATATTTATGAGACTGTAACAAGTATGTACAAGTATTTTGGAACAACTTTGTATGTTACATAATGTCACTTAATCAGAGGAGGAATCTGAAGGAGAGTACATTTTATTTATATTCTGTTTTATTTTTCTGTAATATTTATTACTGAGAATTCTAAATATTAAAATTTTTTAAATATCTAAGCCCATGAATTTTAATTATATACCCTTAATGCTTTCAGTCTTTGAATTCACATCATTATGTATAGGAGTGCCAAACACAGCAAAGTACTTGTACTTTAATTTTTGAAAAAGAAGTTGTTAAAATTTTCTGTGTGATTAATTCTCCATAAGTAACCTTGAATAAATGGATTTCTTGATTTATGATAGCAGATATTGGAAATGGTCTTAAAGTATAATGGATTTTGTAAAGCATGTTGAACTCTTTCTGTGACACATGAAGGAATCACTGATAGATGCAGAAAGTCTGGCTCAGATGTCAGGCAATTTTTGAAGTAGAAGCGCATTTATAGTTATTTCATTCCTTGTTTTACCTTTATCTCTTCTAAATTCCAGTTTTTTTTTTTTTTTAAGTAAGTTCATGAGAGAAATAAACGTTATTAAGATCAAGTGTAGTGGCTTTGTTATTTATTGCAAAGAAGGTTATAACTTGCATTTCTTTATGTTTTCTCATTTCATCAAGAAAAAAAGATTAAATGAAAAATGTCATAGAGTTGCAGAAAATCATTGGCCAAATTATTGGGTTGTGAAAGTCCAGCTCTTCATTCTCTTATATTTTTTTAACTATTTTATATTGAAGTATAGTTGACTAACAGTATTGTGATAGTTTCAGGTCTGCTTTTTATTCTCTTAAACTCGAGATTCTTTAGTGAATAATTCTTTTAAGTGTTTATCAGAAGTAAAAAAAAGCAGTTTAATTGTATTCCATTTTATTAGGTATGATTTTAAATACTATTTCTTAGCACATAGTAAAGAGCTGAATGATAGTAAGTGCATTGGGTTGCTTATTTTCTATTTATTCATTTCACAGATATTATACCTAATGACATTTGCATTGCTAAATACAGTGTTAGGTTCCAGATAAGACAACTCCAGCCTTTATTCTATTTTAAGAAAGTATTACAAAAAAACTAAATCTTTCATTAAATTCAGTTTTTCAGAGTTACTGGAAAATTTATGAGAAGTTGTGCTCATTAAACTAGTCAGAATCATAAAGGGTGATGGGTTGATCTATTTGACCATGAAACAGTTATTGTTAAAATAGTTTGTTCCAAATGACCGTCTGCTCTAAGTTTAGATGTTAATTACATCTTGTATTAATCTCTTTGGGAATTAACAAGTTGGAGAGGTTATAGCTATAGATATTTTTTAGATTAGAATTATGGACTGTTAATCTAATACTAAATAATGAGATTTGGTCTTTTAATATTTTAAGTACAATTTTCTTCTTGTTCATGATTGCAAGATGGGAAGTCATTTTTGTAAAGTTGAATATGTTAAGAGGAATATTGAAGCTTGAATTATGGTTTACATTCCTGGAATTTAAGGTTATGTCAACTTGATTGGTTTTTAAGATACCCTGCAGATTAAAAAATTGTTCTACTTGGCAGTTAGAAATGGATTAGTGTTATTTCTAAATAAAACTTAAAAAATTGACTAGAAGTGTAGGAAGTACTTAAAAATGGACAGTATATTGAATACAGATACTTTTTCTCAGATATAGGTTATTGGATAAAAAGCTGTTTTAGGAAGCAGTTTATGATATAGTTAGACCATAGTTTTATGCATTTAAATTATCAGAAATTCTGGCTTTAGTGAGTGACATTAACTGAGAAAGGTTTGAATAGTGATTCTGAACTAAGTTTGGTAGATAAAGTGGAGAAAAAGAGGCACTGGCATCTCATTTTCTCACTTCATAGCATAGTTAGTAAACTTGCTCTGATAAAGATTCTTTAAACTGAATAGTAACCTATTTTATGTAAATGTGATCTGAATGTACTTAACTAACATTTCCTTTTCCCTATATCCTGGTCTAAAATGTATCAGTTTTGGAAATACAAACCATATTTTGTTGATTTTTGTATATTAGCATTTTATAGTTGTCATTAACAATTATGTTAGGGGTAAAGTATACAGGGTTTTATTCTGTTTGTTTTATTTGATTAATTTGCTATTATGTTGCTTGTGAGTAGGATTTCAAGAAAATGCTTTGAATGATTTTGGTTTGCAGATTCATTTTCCCTTCAGAGAGCAGCCACCCTCTGACTTGACTTTTCAAGTGTTTATTTTATGGTATAATTTCAGTATAACTAGAAAGATTAGTTAAAGCTGTCCGGGAAAGGGAGTAGTTATAGTGATATCTATTGGCAATTGAGGCTTAATCTTAACTCTGTTACCTCCTACTGCCCCCCGCCTTAGGCCAGAAAGCAAAACCAGCCTAGCTCTTTATTACTCATCTGTTATAAAAGGTTGAGAAAAGATGCCAGTCCTCTCCCCGACTCCCCACCCCTGATAAACCTTGAAGTCTGGCAAATGTGTCATGGCAGAATAATTGCAGTTTAGTGTTGCCTTTAAGGTGTGCCATTTCAGTTTGGCAGCTACAATAAATGACTGAAGGAAATTGAAGATGATAATTCAGCATTTCAAGATGCTCCTGCTGAAGTGAATGTAGACCTATCCAGGGCTTGAATTGAAAGTTTATAGTAATACAATATTTTAAAGCCAAGTACCCAGGAAATTCATGGTGATAGGATTTGAATGAGATGATTAGGAGAAATAGAAAAGAATTCCTTCACTTCCTTATTAGGTGGGTATTAGCTATTGAGAGGCTGTGTTGAAAAATGTTATTGTAAAAAGGATAGAGGCTTTTTATATGCAGTTTTCTATGGAATATAATTCATCGTGGACCTTGTCCAAAAATGTTTGGTTATTAAAATAACATGATTATAATAAGGAATCACTTCTGATTTAGTGTTATAGCATTTTGTTGCCTGTAGACCATGTTGTGCTGTATTTGGGTGGTACTGTTTCATTTAGTGACTTGATTTCTCTATTAACACATTCCTTATTAAATTGAAATTATTTACCACACCTTTTCTGATCCTTCTTTGTTATTCTTCCCTTGAGAAGGTAATCATTATTAAAAGTATATAGAAACATTTGGGGTGCGTGTTTTTTTTCAGATTACTGATTTAATTTTTTTCAAGTATAAAACCAGGAGTGGAATTGCTGGGTCGTATGGTTAGTTCCATTTTTAAGTTTTTCAATGTCTACAGCAGCATTGTTTACAATTGCCAAGGTATGGGAGGAACCTAAGTGTCTGTCAACAGATAAATGGATAAAGATGTGGTGTATGTATATACAGCGAAATACTACTCAGCCATAAAAAGAATGAAATTTTGCCATTTGCAGCAAATGACGATTTAGAGGGTATTGAAGTGACTTAGCAGCAGCAGCAGGAGCAGCATGCTAAGTGAGATGGGGAAAGACAAATACTGTATGATGTTACTTAAATGTGGAATCTAAAAAATACAATAAACTAGTGAATTAAAAAAGCAGACTCACAGATACAGAGAACAAATCAGTGGTTGACAGTGGGTAGAGGGAAGGGGGAAGGGCATTATAGCATGGGGAAAGGATGTATAGTTGTTGCTGGGTTTTATGGGTTTTGACACATGTGAGTTTC EMBV3_15492 CATGGTTACGCTGTACGGGGGCGTAGAGGGGCGCTCAGCAGGGAGACCCCCTTTCCCGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19564 GAGGAGTCGCCGTCAGGAGGGGCTGATCGATTTTATAGCAGTTTTGCTGTGGTTCCGTTT Gene GeneID:614946|SLC39A13:NM_001098132:105_cdna Constitutive 0 NULL GeneID:614946 15 GENE SLC39A13 MGC151732 solute carrier family 39 (zinc transporter), member 13 EMBV3_08546 TCAAGAGGACCAAATCGTCTGTGAGGATGCGGATGACTGCAAGAGTCAAGTGTGTCAGTG Gene GeneID:507201|PLA2G2A:NM_001025324:93_cdna Constitutive 0 NULL GeneID:507201 2 GENE PLA2G2A NULL phospholipase A2, group IIA (platelets, synovial fluid) EMBV3_06676 AGGGCTACCAGAATCTGAAGAGCTAGAATCCATAAATCCTAAATGAAATTTTAAAAATTA Gene GeneID:100140945|CASP9:XM_002694144:529_cdna Constitutive 2 NULL GeneID:100140945 16 GENE CASP9 NULL caspase 9, apoptosis-related cysteine peptidase EMBV3_43583 CTAGAGGACCGGTTCCAGCCGAACATGACGGTCCAGCCAGTACCGCTTTGCCCCTGGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40695 TTTTGGAGGGGGTGGCAAGGGCATCTCCCCCGTATTCCACATTTTTTCCCCAAGATGAGA Gene GeneID:786886|ELK1:XM_002700069:134_cdna Constitutive 0 NULL GeneID:786886 X GENE ELK1 NULL ELK1, member of ETS oncogene family EMBV3_19710 GCCATAGCTCTGCATGGTCTTAGTGGTGCAATGGCTAGTATAAGCGTGCGTTCGAGTACC Gene GeneID:538487|LOC538487:XM_002697959:671_cdna Constitutive 0 NULL GeneID:538487 25 GENE LOC538487 NULL similar to UPF0472 protein C16orf72 EMBV3_28717 TAGGCGTGGCTGGAGTACCCGGAGTCTCTTCGTAGATTTCCGTAAACAGAGCCGAAGCTT Gene BVV0102_216851 - 0 NULL GK000029.2:42792410-42829260 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33299 CTGTCAATTCATGCGCCAATCCGTTTCTGTACGCAATTTTCACAAAGGCATTCCAAAGGG Gene GeneID:281900|LHCGR:NM_174381:21_cdna Constitutive 1 NULL GeneID:281900 11 GENE LHCGR NULL luteinizing hormone/choriogonadotropin receptor EMBV3_07099 GGTGACCTGGCTGGTCCCAGAGGCCCCAGCGCTGCTTTTGGGGGCTCAGTGTCTACATAG Variant GeneID:618023|LOC618023:XM_002699749:6_cdna 287^754 1 EMBV3_38850 GeneID:618023 X GENE LOC618023 NULL similar to mCG1035526 EMBV3_38763 GATGAGGGCTGCTTGGGACCGAGCCAATGAGAAGCTGGTAGACTTCATCGTGAACAGAAA Gene GeneID:615782|LOC615782:XM_002699719:118_cdna Constitutive 0 NULL GeneID:615782 X GENE LOC615782 NULL similar to Predicted gene, OTTMUSG00000017677 EMBV3_35810 GCCAATGGGCACGGCGAGAGGATTACCATAAATTAGAGCAGATCACTGGTTTACCTCGGC Gene GeneID:787623|LOC787623:XM_002707738:50_cdna Constitutive 0 NULL GeneID:787623 16 GENE LOC787623 NULL similar to Homeobox and leucine zipper encoding EMBV3_27095 GCCACTGTTGTTCCTTCATCTCTGGCAGGGCACTTGATCCAAAGTCAAAAACTGGACTGA Gene GeneID:788312|LOC788312:XM_002685354:233_cdna UTR3_Alt 2 NULL GeneID:788312 2 GENE LOC788312 NULL similar to Formin-like protein 2 (Formin homology 2 domain-containing protein 2) EMBV3_26331 CTGCTTTGGCAGCTAGTACCTTCCCTTGCAGAATCATTTCCCCTAGCATATGCATAATAA Gene GeneID:535008|BATF3:XM_002694263:254_cdna Constitutive 0 NULL GeneID:535008 16 GENE BATF3 NULL basic leucine zipper transcription factor, ATF-like 3 EMBV3_01661 ATCCAAAGGTGCAATGTCTGGTGAATCTGACAGATGAATCAGAACTTCCCAGCTAAGCTG Gene BVT0102_003932 + 0 NULL GK000011.2:74659433-74856428 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032907 1 XLOC_019143 NonCoding TCONS_00032907 XLOC_019143 NonCoding NonCoding - 11:74688040-74688657 - TSS23906 617 0.99837925445705 1 0 0 0 0 0 0 0 0 0 0 0 3.71018828817833e-06 5.79528484469161e-06 0.000102308179773005 0.000556550284833532 0.000524811920450122 0 0.000295988835128482 0 0 0 0 0 0 0 0 0 0 0 7.86807752047623e-05 0 XM_005195279.1 LOC101907695 PREDICTED: Bos taurus histone-lysine N-methyltransferase SETMAR-like (LOC101907695), mRNA. 0.0 664 84.07 0.995137763371151 0 noncoding 0 0 0 0 ATTTTTCACTTTTCACCAAGAACTTTATTGAACAACATATTCACAATTCACCATTTTGTTCCACTACCTTCTGTCATTTTCCAGGCAACTTCATAATTCCATCTTCCCAAAACTTTTTATCTTTTTGAGCAAAGAACTGTTCCAGGTGCCTTTTACAGTCTTTCAGGAAATTAAAATTTTTTCCATTAAGAGAATTCTGTAAAGACCACAATAAATGGAAATCCAAAGGTGCAATGTCTGGTGAATCTGACAGATGAATCAGAACTTCCCAGCTAAGCTGTAACAGTTTTTGCCTGATCATCAAAAAAAAAAAACATGCGGCCTTGCTAATGGTCTTGCTGATAGAAGATTACACATTTTCTGTTAACTAATTCTGGACACTTTTCATCAAGTGCTGCTTTCAGCTGGTCTGTACTGGAGGCAGTACTTATTGGAATTAATCATTTAGTTTTCTGGAAGGAATTCATACTAGAGGACTCCCTTCCAATCCCACTGTAAACACAACATCACCTTCTTTGGATGAAGACTGGCCTCTGGTGTGGTGGGAGGCAGTTCATTTCGCTTGCCCCATGATTTTCTCCAATCCACATTATTGTACAGAATTCACTTTTCATGGC TCONS_00028502 . 3' 21215 TCONS_00028502 . 3' 21831 EMBV3_30754 TTATTATTCAAATTCAAATATGAAATCATTCCTTTCACATGTTATCAAATAGCAAAGACT Gene GeneID:513281|CPD:NM_001101086:31_cdna Constitutive 2 NULL GeneID:513281 5 GENE CPD CPM carboxypeptidase D EMBV3_39842 CTGCGTCGAGGGAACCTGCTGGGTGGTTGGAAATATTCAAGCTTCTCTGGCTTCCTCATT Gene GeneID:529166|CBLN3:NM_001079603:185_cdna Constitutive 0 NULL GeneID:529166 10 GENE CBLN3 NULL cerebellin 3 precursor EMBV3_16777 ACCTTCTCCGTGGCCACCCCTTTCTTGAGTGGCTGGGAGCCAAAGTTGGCACGAAAATAA Gene GeneID:282883|CTSD:NM_001166521:218_cdna Constitutive 0 NULL GeneID:282883 29 GENE CTSD NULL cathepsin D EMBV3_29112 CCAGCTGTTAATTGGAGGTGTCACTGGATGCTTGCAAACCATACTGGCTACATCAAAGTG Variant GeneID:281813|FUNDC2:NM_174338:58_cdna 310^385 2 EMBV3_17208 GeneID:281813 X GENE FUNDC2 HCBP6 MGC134489 FUN14 domain containing 2 EMBV3_41155 TCCACGACTCTTCTTTGCTGGAGAACATACAATCCGTAACTACCCAGCCACAGTCCATGG Gene GeneID:532997|KDM1A:XM_002685716:415_cdna Constitutive 1 NULL GeneID:532997 2 GENE KDM1A AOF2 KDM1 lysine (K)-specific demethylase 1A EMBV3_23499 TCCTGCGTTAGATTTATTTGTTCCTGTTTACCCGCTGAATTCTGGTTGAGGCTCACATCG Gene BVV0102_289771 + 0 NULL GK000025.2:37363785-37389782 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147190 TCONS_00147189 TCONS_00147193 TCONS_00147188 TCONS_00147191 TCONS_00147194 TCONS_00147186 TCONS_00147184 TCONS_00147192 TCONS_00147185 TCONS_00147187 1 XLOC_089315 Coding TCONS_00147185 XLOC_089315 Coding Coding ZNF655 25:37378393-37394450 j TSS109889 6465 1 TCONS_00147185_3 543 0.127455529775715 4 0.59759591429995 1.56299082248521e-07 0.000382462805663449 4.17281984904192e-21 0.000390928856470251 0.000260057615414017 0.000112167035121046 0.000408151713148294 9.57763705687648e-05 5.21655203085183e-07 1.08491536045528e-10 4.92372479420527e-05 0.000143721394252284 2.10508381565557e-09 2.95970764392629e-05 7.59459340712737e-05 0.0010697597973966 0.0009600714486967 2.17772926719751e-05 0.000480457858418461 0.000994427617055014 9.66032290830031e-05 5.20673768771118e-07 0.000489009488794356 0.000167336024025652 0.000305899912898162 0.00115695607094527 0.000124077178829497 0.000295200576800721 5.07870766463789e-07 0.000242081211076592 XM_005225031.1 ZNF655 PREDICTED: Bos taurus zinc finger protein 655 (ZNF655), transcript 0.0 1294 98.79 0.11446249033256 XM_005250580.1 ZNF655 PREDICTED: Homo sapiens zinc finger protein 655 (ZNF655), 0.0 2711 85.03 0.37092034029389 TCONS_00147185_3 sp|Q8N720|ZN655_HUMAN ZN655_HUMAN Zinc finger protein 655; 0.0 791 77.67 0.959484346224678 4 coding 0 0 0 0 -0.137699375539647 0.288304614829985 0.0164394346237807 0.747295844684094 CCTGTGATGGTCATTGTCCTCCAGAACAGGGATGGAGGAGGTATCAGCCCAGGAAGCAGCAGAATCTCCAGTGGTCCAGTTTCAGTCCTTGGAGACCCACTCTGAGGGTCTGTCCCCAGAGCCTCAGTTCGTGCAGGACACCGACATGGAACAGGGACTCACTGGGGGATTTCCAATTTTCAAGCCTGATGGGATCTCCCAGCTGGAACAAGATCTACAAGTCTTTGATCTGGAAACTAAGAATAGAGAAGTCTTAAGAGATGACTGCTCAGATGGAGATACCAGAGACGAGAACAAGCTGTTGATTCCTAAGCAGAAAATTCCAGAAGAAGTACATTCATACAAAGTGAGAGTAGGAAGATTCAAAAAGGATATTGCCCAAGTTCCTGAGACTAGAGAAGTGTATAAGCCTGAGGACAGATTAGAAAGGCTTCAGGAAATCCTAAGAAAATTTCTCTTCCTGGAGAGAGAGTTTAGGCAAATAACAATCAGTAAGAAAACCTTCACCAGTGAGAAGAACAATGAATGTAATGAACTTGAAAAAAGCTTCAGTCTGGACTCTACTCTTGATACAGATCAGAGAGTTCTTAGAATACAGAATGTTGATGACATTGATAAGTACGATGTGAGCCTCAACCAGAATTCAGCGGGTAAACAGGAACAAATAAATCTAACGCAGGATTTTCACAGTAATGATTATAAGGACAGTTTAATGGAACTCTCCCACCTTAGTAACTGTGAGAGCATTCCTACCACTGAGAAATCTTATAAATGTGATGCATGTGAGAAAATCTTCCATCAGAGCTCAGCCCTTTCTAGACATCAGAGAATTCATACTAGAGAGAAACCCTACAAATGTAAAGAATGTGAAAAATCTTTCAGTCAGAGTTCAAGTCTTAGTCGACATAAAAGAATACACACTAGAGAAAAACCCTATAAATGTGAAGCATCTGATAAATCCTGTGAGGCGTCTGACAAATCTTGTAATCAGAGCTCAGACATACTTCAGCATAAGAGGGTTCACACTAGAGCAAAATCTTATAAATGTAGCAGTTGTGAAAGGGTCTTCAGTCGTAGTGTACACCTCACTCAACATCAGAGAGTTCATAGAGAGATGCCTTGTAAGTGTACTGTGTGTGGCAGTGATTTCTGTCACACCTCACATCAAGCTGAACATCAGAAGGTCCATGATGAAGAGAAGTCCTATGAATACAATAACTGCGGGTTGACCTTTATTAAACATCAAGGAATTCGTCCCAGAGAAAAGCCCTATACGTGTAATGAATGTGGAAAAGACTTCAGGTTGAATTCTCATCTTATTCAGCATCAAAGAATTCACACAGAGAAACCGCATGAATCTAGTGAAAGTGGAAAAGCTTTTAGTCAAACTGCATGCCTTATTCAGCATCACAAAGTTCATAGGAAAGAGAAATCCTATGAGTGTAATGATTATGAGGATAATTTCAGCCATAGCTCAGATCTTGTCCTGCAACAGGAAGTCCTCACCAGAGAAAAAGCCTTTGATTGTGATGCGTGGGAAAAGAGCCTCAGTCAGAGAGCCCACCTTGTCCACCATCAAGGAATTCATACCAAAGAGAAACCTTATGAATGTAATGAACATGGGGAGACATTTAATCAAGTTCAGGCCTCATTCAACATATGATATGTCACACCAGGGAGCCATCACGTGTGTCCTGACTGTGGTAAAGCCTTCAGTCCCAGCTCAACCTTCATTCAGCATCGAGGAATTCATACCAGAGGGAAACCTGAATGTGACAAACATTGGAAAGTTGTCAGTGTTGCACTCTTGACACCTGCAAACCCATACCAATGAGAAAACCTACAAATACATTGAATGTGATAGATGCTTCACACTATTTTCCTACCTTAGTATCATTGGAGAATTGATACTGGAATAAAATTCCATTGCTGTAATGAATGTGAAAAAGCCTTCAGTCAAAGAAACTACCTTGTTGAGCATCAAATTCATTTCATGCCGAATACCTATGAATGTAATGTGTATGTGTGGGAGGATTCAGCCATATTTCCAGCCCTCATTCAGCAGTAAAGAATCCATACCCAAGGGAAGTCCTTTGGGTATAGGAAATGTGACAAGTCTTTCAGTAGGAGTTCAAGTCTTTTTTCATCATCAGAATGTCCACACCAGACTGGAGTCTGATACAATGCAAGTGGAAAAATTTAGCACCATATTTCAGGCTTCAGTTAATATCAAAATATTGAAGGGAAAATTATTATTTGTGTATAAAATAGTTAATGCATAGTCCCAGTCTTTTTCACTGCGGAAGAGTCTAGTCAGAGGAGTGACTTGGTGAATGCAGTGCTGTTTTCTCATGGCATTCTTTTATTTAATAGGTGTTATAAGTAGGTATGTATACTTTATTTATGGAACTCCAGCTTTTTTATTTTAATGTGGCCTATAAACATTTTTATTTTTCCTGAAATTGGTTTTTATTGTCCAATAAATGCTTCCCTGATACATTAATACACCAACGTTAAAACAATAACTTCTGGAAAGTTTCTCTCATTTAGCTTTTTCTACTGTTCTCAGCCAGAGTTCTTTCCAAAACAGACTCTTGGGCCTGCTCTTTGCTGAGGATCCTATTCCTTTCCAGCCACAGCATTTGGGTTCATGTTGGTTTCTCCATTCTCTTAAGCACCTTCAGTGATCGTTTCCTAGTTTTAAGCTTTAAGCCAGTGGTATGCCATCCCTACTTACTTTTTGGGTGTCTTCTTTCCTAAGCAAAATATCTTTAGAAGAAATGGATTTTCACACTCTTGTCTGTTCATGAGTATGAAGGATTCTGTTTCCCCTGAGTCTGGCAAGAAGCTAAACATTTTCAAGTGACGCCCAAGTTCTTAGCTGTGTTAGCATTCACAGCCTTCTAAGAGAGATGAGAAAGACATTAGAAGCTGACAATACTGGTGGTAGCCTAGCTATATTTGGTGTCTATTCTGCATGTCTAAGTTCAGGATGATTTATGTCCATTAAAGGCCAGCAGAACACTCAAGTCTGCCTTCGATAGGGCAAAACATAAAGAACGTACGTTAAGAGATCAGAGATCTTCATAAAGGAATACTGCCTTCCATCTGATATTGCGGGTTTTGTGTAGTATCTCAAGATAGTATTTCAAGAATGGCAGAAAAGTCTGTAAACATTTAACTGTTACAGTTGCTTCATTGTTTGGAATTGTTTACATATCATATATATATATATATATATATTTTTTTTTTTGTATTTTACAAGCGTCTACAGGCCATATAAAAACTTTTTTTTTTTGATTGATGAAACTGATCACAGACGTTGGCTCCACAGATCAGGGTCACTGTCATAACACCTAGCAAGAGTTCATGATTCTGCAGATGATGTCAAAGTATTTGATTGTATTTTCCCATCTTAAGCATCATAACATTTTGTGAATAAAGCAAGTGTTATTTAAAACTCTAGTAGTTGTCCCAGCGATTGAGTTCACCTGTTAAAATACTAGGGATCCTTACCAACTAATACAAAAATGCATTGCTTACTTTGTAAGCCTCTTCTGCCTAATAAGCTTTAGGGTAGTTCTACTGCCGTATTTTACCTTTTAGCCATCAGCAAGCATAGGATCTCATCTGGACAAGGTAGGGACCTAAATGAATTGATCTAAATGTAAAAGCATATGAAAAAAAATGCATGTTTTTTTTTTCTTTCCTATCTATGAATATGTATATCCTACTAATAGAGACCACCAGTAGTTACCTCTGGTGATTATGAAACAGCAGGTTGAGTAATCTCTAAATATCAGGAAATGTAAAAATCACATGTTATGCGTTTGGCTTAGGAATGTGCTTTTTGTACTTCCACTTGAATAAAGGTGTGTTTGATACTTTGAGAATCTGTTTCAAATAAAATCTGAAGTCCTCAGCCCAAAGTACTTGGGGATCTTAGAATCACCTTCCTGTCTGCAACTCAATTCTTTCCAGAAAGCTGACTCACAGCAGGAGTAGGTCACTCCTTCCTGCAGGTATAGTGCTTGGTCCTCCACAGAACTCTGGAATAAAGCCTAAATGTTTACAACTTTAAAGGGTTACTTGACTGGGATGCTGTTGGCATATGAAGTAAATGGGTTGAGTAGAGCTAGGTAGAATGTGTTTTTTCAATAAAACTTCAAAAAATGAGAAACCAGATCAGCATAACATTGTAAATCAACTATACTTCAATCAAAAAATTCTTTTAAAATGAGAAATCAAAATAATCCTTGAGGACAAGTAACTTGTCCATTTAAGCTTGCTGATATTTAATTGATCCAATATAATATGTGTTCTTAGTCTTTTTAGTCTTGAAGACGGGGAAGGAAGAGAAGAAATCTAATAGTTGGGACACCTAAGTTTGTCTCTTCACCTGCTTGTGTACACATCTATGTATATATGCACATATTTGAACAATCCTCATAGCTCTTTAAGGGAACAAACTGTAACAGAGACACTGAGGTGTAGAGAGGTTGAAGAACCTATAGGATCACACAGCAAGTTAATGGCTCAAAGTCAGGGATATTTGACTCTAAAGCTTTCCGTCATCTTGATGTTGGTGTCTAACGTATCTCAGAACTCAGAGAAGAGACATTTTCTTTGATAGCTCTTCATTCCCTATTACATACTTGATTCACCATCAGTTTTCAGCTGATCCTAAATGCTCCCAGAGCTCCAGGAAGCTGGGAGAAAATACCCCAGTATCTTCTGAAAGCTAGGTAGAACCATCCCCCTCCCACAGACGGTTTTGACAATGTTAGGCCACGGGTTAGATCTCCCAAATTCCCATCTCCTGCTAAGAGATCCCCACTGCCATCAGTAGGTTTATATTTACACTTCTTTGTGCCCCAAATGCACTTTTTTCTGCTAACTAGAACTTACTGATGGGTACATATCCTTATCAAAGTTTGTTTACCGCCTCTGGTTATATTCAGCGGTGGAGCAAAGTGGGTGGGCAATGGGAACATCAAGTTTGAGTCCTAGGTTTTCAGCTTGAGCAAGAGTAGATAGAGGGAGACTAGAAAGATGGAGAGCATGGAGTGTTTTAAGGCAAAAGTATGTCAGAAGTCCCGCAGAAGAATGAATGTGGCATTTTCAAGGCAGTAATGAGGTCTTCGGAGAATGCCTCATCCTAGGACATACCACATGGGTAACTGAGAATTTAAGAAGTTCAAAGGAAGCCCCTAGCGGGTTATCTCAGAAACTGGAATTTCTCACATTGAAAAGTTTAACCTGGTATGTCCTTTCATTCATTCAGTCATATAGTTGCCAGACAGTATGTTTAGTGCCAGCCAATGGATACAGTTAACCTAATCAAATGAATTAATCCATTGAGTAAAAAAGACTAGTCAAAGCAATGAGTTTGGAATTAGGCCTACCTATGTTTGAACTTTATTAGCTATGACTTTGGACATTTTCCCTAGCCTTCCTAGTTTTGGCTATACAATGTGGTGAATAATAGCATGAATATTAAATGAGATAATGTAAAAGCTACTGGTCATATAGTAAGTGCCCAAAAGTTATTAGTGTAAATAATAATATCAAAACCACCATATTAGAGATACTTAGCATAAAATCTAAAAATGAGGGAATGAATGAGCAAGTATTTACCAGTGCAGGACTAGCATTGTCCAGGGAGGGACACCCTGAGTTTCATTTCAGTTCAGCTCAGTCGCTGAGTCTTGGACTGTAGCACGCCAGGCTTTCCTGTCCATCACCAACTCCTGGAGCTTACTCAAACTCATGTTCATTCAATCGGTGATGCCATCCAACCATCTCATCCTCTATTGTCCCGTTCTCCCACCTTCAATCTTTTCCAGCATCAGGGTCTTTTCTAGTGTCACTTCTTCTCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGACTATTCAGGACTGATTTCCTTTAGGATGGACTGTTGGATCTCCTTGCTGTCCAAGGGACTTTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGCGCTCAGCTTCAGAGAACTTAAATATAACTAGAGGAATCATTAGGCACTGTGGGGGGTGTGTGGTAGGACATGCCTTCTAACGGGCAATTCCTGCTGGAGTCTGCAAACTGATGTGTTTAACATCTGTATCATATGGCATTATGTCTTACACTTCTTTCAAGATTTGAGTGCATGAAGGAGCCAGTGTTAAATCTGTCGATTAAAAAGATGTACAACATGAGCATTGCGAGTTAAGTTTTATTTGGGGCAAAATGCTGATTGTAGCCTGGGAGACAGCACCTCAGATAGCTCTGAGAGACTGCTCCAAAGCAGCAGTGGGGGTAAGTCAACATACAAGATTTCAGTGAAGGGTGTATGTGTATGTGTTAGTTGCTCAGTCGTGTCCAACTCTTTGTGACTCCACAGATTGGGGTCCGCCAGGCTCC EMBV3_32469 TTTCCTGGGAGGCAGAGAAACCTTCAGAGTCACTAGAAAAGCAGCCGAGGAGGGAGGAAG Gene GeneID:540403|LOC540403:XR_083713:81_cdna Constitutive 0 NULL GeneID:540403 7 PSEUDO LOC540403 NULL hypothetical LOC540403 EMBV3_29496 AGTATATTCTGTCCACCACCTCCCCACCCTTAGTGCAGTTTGTGAAAAGGCCTCTGGGTA Gene GeneID:786377|LOC786377:XM_002683841:2_cdna Constitutive 0 NULL GeneID:786377 29 GENE LOC786377 NULL similar to tripartite motif-containing 43 EMBV3_43626 GGCGGCCGAATCTTCCTTCAGGATATCAAGCTGTGTGATTTCATTGAGACTCATTACCTG Variant GeneID:281173|FTH1:NM_174062:4_cdna 479^603 1 EMBV3_42668 GeneID:281173 29 GENE FTH1 MGC128102 ferritin, heavy polypeptide 1 EMBV3_15563 ACCAGCTTCGAGGCCGCGCCGTCTCTGCAGGCTGCCATGGCTGCCGTCGACAGCTTCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26922 CTGAGCGACTATATCGAGAAGGAGGTGAAGAGAGCCCACCAGCTCCCCGGACACCTGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24691 CCCTGTAGTTTTGGTTCTTTATGGTCTTTGTCTGATTTGGGTATCAGGGTAATATTAGCC Gene BVT0102_247214 + 0 NULL GK000010.2:22857083-22876972 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34189 TTCCAGATCCTGGCTGAACGGCAGGACATGCCCAGCCTCGCAGGTGTCGACAGAAGCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19355 AGAGATGCTCTTCTGTCTGACATCCCGGTGCCCCGAGGACTTTGAAGCCTACGGCTGTTA Gene GeneID:516393|OC90:XM_002692609:46_cdna Constitutive 0 NULL GeneID:516393 14 GENE OC90 NULL otoconin 90 EMBV3_39075 GCTAAGGCCTTACTGGAGAACGGTGCCCACGTAATAGAGAGTGCATGGAGATTCTACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10404 ATGATTAACCTAAGACCTTGGTGGTTTCCATGTACGGTGAATGGCTTTGTTCGAAAGTAC Gene BVV0102_165570 + 0 NULL GK000010.2:89658523-89661687 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015369 TCONS_00015370 TCONS_00015371 TCONS_00015372 1 XLOC_008472 Coding TCONS_00015372 XLOC_008472 Coding Coding SAMD15 10:89648422-89660028 = TSS10862 3633 1 TCONS_00015372_2 652 0.148362235067437 4 0.687289961223611 0.000680025120992659 0.000158652537945612 0.000566172861868243 2.1182768498664e-237 0.000152889176050484 6.15660824511997e-08 2.52102201708507e-196 0.000463082302965561 0.000322706449145877 4.96087464656782e-05 2.57081875071594e-08 4.69270614633316e-78 4.62061991709569e-05 0 9.68091034112003e-110 0.000209836026675655 5.43671027725148e-05 0 2.70941692472695e-54 0.000244166336780661 3.80827183572444e-147 8.34767906614968e-05 3.70904435321056e-05 5.53447971076665e-247 0.00048157410454236 0.000278095857250939 0.000154631650468352 2.5749039087426e-05 6.51641785287778e-05 0 XM_608884.7 SAMD15 PREDICTED: Bos taurus sterile alpha motif domain containing 15 (SAMD15), transcript variant X2, mRNA. 0.0 5072 99.75 0.776768510872557 NM_001010860.1 SAMD15 Homo sapiens sterile alpha motif domain containing 15 (SAMD15), 0.0 796 72.19 0.403248004404074 TCONS_00015372_2 sp|Q9P1V8|SAM15_HUMAN SAM15_HUMAN Sterile alpha motif domain-containing protein 15; 4e-167 498 49.93 0.998466257668712 2 coding 1 0 1 0 0.0499851064791201 0.711719337395985 0.00525061198188514 0.92215161287449 TTCAGTTCAGTCAGCTATGGCAGATTTTTAGTCAGTGCTTGAAAGAACAAACAAAACCCGGGGAGGGGGAAGATTCCTTGAGACCTGGCCGGAAGTCGTGGTCTCCATAGAGACGCTGTTGGAAGTTGGAGTTGCTAGGCGGCCTGGGCGCGACGGCTCATCTGCGTCATGGCTGAAGTCCCAGAGGATTACGATTCCCCCTCTGACGAAAATGAAGACCTGAAGACTGAGAGACCGAAACTTCAGTTTCTTCAGATGACCGAAGATATCGAACCAGGCAGCGTGGCAGAGGCAGGCCCAGAGATTCCTGTAGAGATTGACCAAGAGCCACAGCCAGAGATAGAGGAAGAGGCCTTCAAAGAGAAGACACCAGAGAGTGCTAAAGATGTGCCTCCGCACCTAAAACCAACCTGGACCTCCTTGGAAGAGGTTCCCCACAAGTTCAGGATAGACCTTTTCAGCGAGGTTGAGCTAGGGATTCCCCTAGAGGTAAAATCAGAGACTTTTGGACAGATAGAAAGAGAGCTTTTGAAGGATTTGCAAAGCCCTGTGGACAGAAAGCATGAGGAACCAGAGGAGGAAGCCAAACCGGATGTTCCTGAGGATGTACCCATAGAAGAGAGCAAACCAGAGGTTCCAGAGGAGACACTCAGAGAGCAATATGAAAAGACAGGTCTAGAACCTACAGAGCCGACCAAACCAGAATCTCCAAGTGAGAAACCAAGAAAATCAATTGAAGAGGCAGATCAACAGCCACCAAAGGTGACCACATCAGAGAATCCAGAGGAAATACAAAGTAAGTCACCTACAGAGAAAAGGACAGAGTCACCTGAGCAGGCCAAACCAGAGTTTCCAGAAGAGAAACCGAGTACAGCTACTGAGGAAACACAAGAAAAAACTCCAGAGCCACTAGAAGAGACTGAATCAGAGTTTTCTGAGGAAAAGTCAAGAAAACCAATCGAGGACACAGTTAGAGAGCCATCAGGAAAGACCATACCGGAAGTTCAGGAGGAGACACCAAGTAAGTCAACTTCAGAGAGAGTTCTAGAGCCACCACAGGACACCAAACCAGTAGATAAAAAAGATAAGCAGAAAAAGTCAACCGAGGAGACAGATCGAACACCATCACGGAGGTTCAGATCAGAGGAGACACTAAGAAAGTCAACTGAGGAGAAGGGTCCAGAGCCCCCAGAACAAACTAAAGCAGAGTTTCCAAAGAAAGAACCAGAGAAAACTGAAGAAACAGGTCAAGTGCCACCACAGAAGATCAAACCAGAGGTGCAAGAGAAGACACAAACAGAGCCAACTAGGGAGATAGATTTAGAGTTATTGGATAAAACCAAACAACTAAAAGAGACACCTGTAGAATTTGCCAAGGAAGATAGGCCAGAAGCAATCAAATTTAAACATTCTGTCAACAGGGATGAGGCTGAGTACTCTGACTATCCAATAGGAAATTTGTTAATAAAAGAAACTAAAGTTTCAAAAGACTATGTATTAGAGCCTCTTCCAATAAGTGATATAGACTCAGTGAATACAGATTATGAGTTTTCTAAAGAACTCCAAAATCTGTTCCAGCTTTCTGATACCAATTATGAGTTCTACTCCTTTTTCTCTGAGTCTCAGAGGGATTTAAAAGAGTCCTGTGGTGAAAAGCAAGATCTGTGCCTAGAGTCAATGAAACTGGTATATAAAGATAGAGACACCCAGCCAGAAAAAAATTCTGATCTACAATTTGAGTATCTTCAATGGAGCCCAGAAAAAGTTGCCACGTGGATTTGCCAGCTAGGCTTCCCTCAATACAAGGAGTGTTTTACCACAAACTTCATCAGTGGCCGAAAACTCATACATGTAAACTGCTCAAACCTCCCTCAGATGGGGATAACAGATTTTGAGGACATGAAGGCAATTTCTCGGCATACCCGGAAGCTGCTGGGAATTGAAGAGCCATTATTCACACGCTCCATCCGCCTTCCCTACAGAGACAATATTGGCTTATTTTTAGAGCGAAAAGGTCATAGTGGAATTAAGTCTGATTCCTTGACCTTGTCTGAATTTGCGCGAGAAGTGGGATTACAGGATCATGCTCCACGGGTGGCCACCCTCGAAAATGACGCAGCATTATAGTCCACTGACCTGTAGGGCAAGCTGGCTCACTTAACTTGAAAATCAAACTAAATTATGTGGGGGAAGAAATGAGGCATTTCTGTGTTTTCTTTCTCCTCTTCATTCAGAATCAGAGTTTGAACTGCTGGTCCATTCCTAGTTCTGCCACTGACTCACAGCGCCCTCCCTTTATTTATGTTTCAACTTCGCCCCTTGTTAAAACAAAGATAGCAACAGCTCTCTTTCTGGGTAACTGTAAGACTTCCTGATAAATTCTTCTACTTCATCTGGTTTTGGAACACATTGGGAAAACATAACTGAAAGTAAAATCACCTGCCAGCTCAGATTATCCCAGATAATTATTGAATCAGCATTAAATCAGACCGTGATGCCCATTATAGGCAGGTCACTAAAGAGATTGTTGAGACAAAGACCTCTTACTCTTTTATATAGCCAGGCAGATATGATCTATTCTTGACATGTTAACTGTCTGTATCCAAAAGAAATTAAAACTTTTCATATCTTTATGACAAACAGAAAGTTACTACCTGGAGCCAAGCCCTTAGGCTAAACTCCCAGCGTCAGGAAGACAAAGTGCCCCTGAAATGCTCACATTTCAAAGTGGCCCCAACAGCCCTGCCCCCAGAAGACCGTCCTGGGATGGAAAACTGGCAGGTTTATTCACTTTTAAAAAAATATTAGCATACATCTCCAAAACAGAGAAAAAGGATTAAAATTACATGTTTTAAAAGAAAATGTTTTGTGAAAAAGTAGGGGCGGGGGGAGTTCTCATTCCTTTTTGGCATCAGAGAACAAAAAATTTTAAATATCTTTTTAGATTTGTATTTACCCGTTAAAACAGCATGGCTTATAGAAGTATCACAGACCATGGAGTAGGTCTGGGGTTTGTCTACAAGGCTTTCTATGCGGTACCACCAGACTTTTATAAAATGAAATACAGACCAGCGGCTACGCATGACTGGACTGCTCACAAGAAATTAAAAATACTTCTTGTTGCTTGAATGACTCCGATTCCTTTCATAGACTTTCACTTCTCTTTCTCTTCCCAGGGACACTTCTTAATCCAAAAAACCACTGTACCCTATCCAGTTCCTTACACCTGAATGAATATTCAAAGGAATCCTTTTTTATTTTTCCCAGTGAGAGAACAGTGCCTCAATTTAGCTTTCATACCAAGAATATTAATGTTTGATGATGAACCTAATCTTTTCCCCAAGCAGACTAACAAAATTTTATCTTGGACCATTTAAGATAGTACCATTGAGTCTGCTTGGCTCACAAGCATGCAAAAGAGAAAAATGTAAATGATTAACCTAAGACCTTGGTGGTTTCCATGTACGGTGAATGGCTTTGTTCGAAAGTACTTTAACATTTGGCTAACAATAGTTCTGTTTAGTGACAGCATAGTCACCACCATCCTTTCTCAACTTGATTGTTACTAATACTGTTTTCTATTCTGATTGACATAAAGCAATTGCAAAACTTGAAATAAATCTGAACTGTGCT EMBV3_00049 TCCCTGAGGAGCAGTGGCTCACAGGACCAGGGAGACCAATGTAAATTTGATCATGATGCA Variant GeneID:506983|ZC3H8:NM_001075291:35_cdna 610^732 3 EMBV3_26549 GeneID:506983 11 GENE ZC3H8 MGC140316 zinc finger CCCH-type containing 8 EMBV3_03368 ATCAAAGGCGAACATCCTGGCCTGTCCATTGGTGGTGTTGCAAAGAAACTGGGAGAGATG Gene GeneID:614126|LOC614126:XR_084164:2_cdna Constitutive 0 NULL GeneID:614126 9 PSEUDO LOC614126 NULL similar to Hmgb1 protein EMBV3_38817 GGCCCAAGAGCAGTGACTCATTCCGTGAAGATATGCTGATGGCTGTGACATATACAGTGC Gene GeneID:782645|LOC782645:XM_002693116:528_cdna Constitutive 0 NULL GeneID:782645 15 GENE LOC782645 NULL similar to olfactory receptor Olr245 EMBV3_03500 TGTTTTTCTGGCAGCTTCACGCCCAGTTCCGCTTCAGGCTCACCTCCACGCATGCAAGCT Gene GeneID:788207|NBEAL2:XM_002697110:19_cdna Constitutive 0 NULL GeneID:788207 22 GENE NBEAL2 NULL neurobeachin-like 2 EMBV3_13593 CCTGTTTTCACAAACCAAGAAGTCGCCTCCACACACCAGTACCTAAGCTACCCTTTCAGC Gene BVT0102_384733 + 0 NULL GK000019.2:11032406-11033071 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092198 1 XLOC_056843 NonCoding TCONS_00092198 XLOC_056843 NonCoding NonCoding MIR21 19:11032554-11034636 o TSS69461 2082 1 TCONS_00092198_3 80 1 0 9.14888797470124e-05 0.000299232850464823 0.000164456241464996 2.79197620279457e-05 0.000540671578447411 1.71808873738726e-05 0.000126045436501801 0.000142043800542191 0.000810993116237718 0.000706499077431447 0.000214954807898722 0.00120649245411516 0.000157107580516816 0.000612287237928154 0.000388820060096265 0.0290248554112146 0.00381165187013995 0.0137566005207677 0 0 1.45808219660085e-06 0.00395448055378719 0.00662716482474337 0.0141718304860494 3.66058956547345e-05 6.76797833436147e-06 0.000205436506052811 0.000881166391241176 0.000704173348029946 0.00168065668139385 NR_030880.1 MIR21 Bos taurus microRNA mir-21 (MIR21), microRNA. 5e-28 131 100.00 0.0341018251681076 XM_005257710.1 VMP1 PREDICTED: Homo sapiens vacuole membrane protein 1 (VMP1), 0.0 787 72.46 0.672910662824208 0 noncoding GTTGGAATTGGGCAGCTGGCTACAGACTGCTGAAAGGGCAGCTTAGGTACTGGTGTGTGGAGGCGACTTCTTGGTTTGTGAAAACAGGAGAGATTATAGTATATAAATCAAAGGACATGGAGAGAAAAATAACCTGTTTTAAAAGAAAAGAAGCTTTCTCACAGCTATTCATTTTTAGCTCAGCACGTATTCTGATTTTAGCAGAAATTTACTTTTATATATAACCTAATTTTCTTTCTTTCGTAAGTGTTTGTTCTTATGTGATTTTTCCTTTCGGATGTTTCTGGTTGAACTTGGTCATTTTATTTTGCTGCAGACGGGGCAGGGTCCCAGGAGTGGGGCAGTGATAAGTAGTCTCACTTTTCGCCTTTAGGAAAATTGGTACTGACAATATATTGAGTATAGAATTGAGTTTAAATCTCAACAGGCCAGAAATGCCTGGTTTGTTTGATCAAATCCTGCCTGAATGTCTGCTTGTTTTGCCTACCGTCGTGACATCTCCATGGCTGTACCACCTTGTCGGGTAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGCAACAGCAGTCGATGGGCTGTCTGACATTTTGGTATCTTTCATCTGACCATCCATATCAAATGTTCCCATTCAAACATTACCCAGCACCATGGTTTATGATTAAAAGAATTGGTCCTTAGGTCTAGTGGCACTTTGAATCTTTCGTGCCGTACTACTGTATCAATATCAAGAGGATTTTATGCAAAATTGGGATAGTCTGTGATCAAAACTGAATAAAGGACAAGCAGCCTGCCTTGTGAGTTTTGGAAAGGTTACTTCTTAACCATCTTTTACCCCCTACCTAGAAACTCTAGCAATAGTTACTTACTTGAAAAGCGGTACCCAGATGCTTTAAGTAAACTCACGTTAACCATTATGATTTTTATCTTTAGGGTTTGTGTAAGTCTCTAAATCAGCTTCCAGTTGTCTGTCATCACCTTCACCCGCATTTTATTTGGTGTTTGTCTGAATAAAGGAAAGAGGAAAGCAAATCTGATTTGTACTGTCTGTACTAGATTTGGGGATTTGTTGATAAATTTATTTTGGGGTAACATTAAAAAAAAAAGCCTTGTTCCTTAGGCTGAAGGTCTGAGTGATTATAATACACTTAACTTGTGACCGCGGCTTGTTCATTCTTTCAAATGAATTTGCTCTGAAAACGAATGAAGAGCAGCTCTCCTCCTTCCCTCCACTGCGTGCTCAGGTGACCCCGCTGAATCCCAGCTGGATCCATGTGCTACCCTTGTGTTCCTGCAGTTGGTTGGTTCCATTCTTTAATCCACCAAAGCAGACACAGACAACAAGATCCCAAAGACACCCCCAGTTAATTCCAGCTGATTGGAGACCAGAAAATTTGTAAATAGATGGTTTAATGTTCCTGCACATAAAAAAAGGGGGGGCCTGGGAATTCTTTTGATTCCATCTCTTGTTTTGTTTAAGTCTCTTCTGTGCCTTAAATATCTGCAGCATCTTATGTGTCTCAACTCCAAGAATGTTAAGCAGTGACAGTACAAGGCAACACATTAAGGTGTATACACGAGTACTGGGGAGCACCTCCCTTCAGACAGCGCCGTGCAGGAGCGTGCAGTGTTTTCTGTATTCTCTGTATAATCATAACCCAGAGTGTAGAGCTCAGAGGAGAGAATTTTATTTTCATTTGGATAATGGCCTCTGTATCTGTTCTCCAAATCCAGAAAGAGACAAGGCTGGAAGTGATACCTCGGAACTACACTAGTTCATTAGGTATGTAGAGTAACGTGCGCTCCTTGCAAACCAGCTCAGCCTGTGTTCCCAGTGTGCTCTGTGCTGTCTGCAGCTTTAGGAGGGCAACTTGAGGCTTGGCACTCAAAGCGATCCAGTCAGTACAAATTAGGCAAGAAGCTAAATAAAACAACTAACTGCCCTCTTAAAAACGGGTGAACTCTCTTTTGACTGACCCATATGTGAAGAACTCATGAGACCCCAATCTTTTTAGCATCAGAAAGCCTTTCCATATGTTTTGAAACCCGTTTGCCTCCATGCGCTTAGTCTGTTAACAGTG TCONS_00092199 s 5' 0 TCONS_00092199 s 5' 0 EMBV3_09037 GAACTCGGGATGCCTCTTGTGTTGGCCCAGGGAAGTCCAATCTTCCATTCGAGTTGCGAA Gene BVT0102_195211 + 0 NULL GK000015.2:26451531-27834010 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048460 TCONS_00098200 2 XLOC_028592 XLOC_058446 NonCoding TCONS_00098200 XLOC_058446 NonCoding NonCoding - 19:17456-17825 - TSS72576 369 2 TCONS_00098200_1 48 1 0 3.04191891852879e-05 2.72315954536391e-06 3.45029147002232e-05 1.08771569940715e-05 5.30736139960979e-05 5.85212770917284e-05 3.25489552075988e-05 2.39169037980988e-05 6.64731341850938e-05 1.88937361336766e-05 8.25650512994336e-06 2.25297308144489e-05 1.66625020837834e-05 4.36769166626811e-05 2.95887713327447e-05 4.60132425725879e-05 0 7.40412684606234e-05 0 2.07425506467278e-05 4.1134501571915e-06 2.38768301179545e-05 0 7.68224883950658e-05 1.20705111393585e-05 2.38667655049873e-06 1.27657692578019e-05 3.71861580113459e-06 1.97341987666849e-05 0.000425425682992023 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 150 69.97 0.89159891598916 0 noncoding 0 0 1 1 -0.12427855949283 0.297782699487679 -0.532865039178384 0.00054399190852659 ACGCTGTAGCGGGAAAGGGCTTCATCTTGCGATGACGGGGGAACCACGTGGTTTTTCTCGAGTTGCGGCGGGATTCTCGAGTTACGACGGGGAATTCGGGATGCCTCTTGTGTTGGCCCAGGCACGTCCAATCTTCCATTCGAGTTGCGAAGGAAAGCTGGGGATTGCTCTCGAGTGACTGCAGGGCCAATAGACCTCATCTAGGCTTGTGTCCAGAAGCCAATGTTCCTCTCCAGGGGCGACCGGGATCTCGGGGTTGCATTCCAGACGCACCCGGGGAGACAGGCATTCATCTCGAGTGGAAGCAAAGAAGCCCGCTCTGCTCTCGAGTCGCGACGGGTATCTCTTGGAGCTCACTGGGTGGACTGA TCONS_00094934 . 3' 100444 TCONS_00094934 . 3' 100812 EMBV3_02845 CAGGATTTTTCTAGAGCACACAGGAATGAAGTGGGGGAGACAAGGCATAGCAGGTTTACG Gene BVV0102_141996 + 0 NULL GK000006.2:115858943-115940213 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07901 CTGGAATGGGAAGATAGGGAACAAGGTATTTTTCGGGTGGTTAAATCAGAAGCCCTGGCG Gene GeneID:539420|ELF5:NM_001024569:60_cdna Constitutive 0 NULL GeneID:539420 15 GENE ELF5 NULL E74-like factor 5 (ets domain transcription factor) EMBV3_16346 CTCAAGATAGAGACTTAATCCCAGTGAAGGGCTTGGGATGGGGGTGGGAAGGGTATGTGT Gene GeneID:519867|EPB41L4A:NM_001105384:12_cdna UTR3_Alt 2 NULL GeneID:519867 10 GENE EPB41L4A MGC160079 erythrocyte membrane protein band 4.1 like 4A EMBV3_36284 CCATGTCACGGAACCTCTTAGGCACAAGATGGATCTGATGGAGGAGGATTTACCCCTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08271 TCCAGGGGGAAAGGAAGGCATAGTGTTGACAATGTTAAGAGAGTATTCTTGTAGGCATGC Gene GeneID:613349|DYNLT3:NM_001101220:46_cdna UTR3_Alt 1 NULL GeneID:613349 X GENE DYNLT3 NULL dynein, light chain, Tctex-type 3 EMBV3_39689 GTGTTAATTCCTGTAAAACAGTTTCCTAAGGACTATAATGATGAAATCAGGCAGGCACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11163 CCTGGTGGCTTGGCGGGGAGCTGCTTATGGGTACGGTCTGTCCGAACACCTTGTTTCAAA Gene BVV0102_180302 + 0 NULL GK000019.2:24121247-24168555 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095859 TCONS_00095862 TCONS_00095860 TCONS_00095861 1 XLOC_057811 Coding TCONS_00095859 XLOC_057811 Coding Coding KIAA0664 19:24167644-24178093 j TSS71362 4504 1 TCONS_00095859_5 980 20 0.570826952526799 0.00853675386276032 0.00455325832272086 0.0058183600855648 0.00187535854693035 0.00153482162562151 0.0020238509025294 0.00188575356089382 0.00243482409934625 0.000806702826348542 0.000967171443709594 0.000582880610744972 0.000344172288983934 0.000288654374429286 3.24751604578634e-71 8.00188728607407e-05 0.00125845272900855 0.00179654177736554 0.000577407397185965 0.00372084679908935 0.000784886521333953 2.92872802009771e-16 0.000257900706676099 1.29422586904689e-43 0.000480395376612266 0.00446424178446076 0.00320560186973422 0.00455856876170835 3.06248623242248e-05 1.34502711257378e-21 0.000831416389642548 XM_005220156.1 KIAA0664 PREDICTED: Bos taurus KIAA0664 ortholog (KIAA0664), transcript 0.0 7809 100.00 0.961145648312611 NM_015229.3 CLUH Homo sapiens clustered mitochondria (cluA/CLU1) homolog (CLUH), 0.0 4612 88.31 0.80550621669627 TCONS_00095859_5 sp|O75153|CLU_HUMAN CLU_HUMAN Clustered mitochondria protein homolog; 0.0 1909 94.69 0.998979591836735 4 coding 0 0 0 0 -1.20070502080054 0.0255584148522998 -0.0278270677454164 0.554890428387684 GACCTGGACGGCCTGGAATCTAGCACTTCTGCCCTAAGAAGCTGGACACGCAGCACCCAGAGCCTCCCGCCCGAGGCAGCAGACCTGGGACAGGGTCCAGCGCCACCCCTTCGAGAGGATCGCCACCCCATTCCAGGTGTACAGCTGGACAGCCCCCCAGGCGGAGCACGCCATGGACTGCGTGCGGGCGGAGGATGCCTATACCTCCCGGCTGGGCTACGAGGAGCACATTCCTGGACAGACCCGGGACTGGAATGAGGAGCTGCAGACTACACGGGAGCTGCCTCGGAAGAACCTGCCTGAGCGACTGCTGCGAGAAAGAGCCATATTCAAGGTGCACAGTGACTTCACCGCAGCAGCCACGCGGGGCGCCATGGCGGTCATCGACGGCAACGTGATGGCCATCAACCCCAGCGAGGAGACCAAGATGCAGATGTTCATCTGGAACAACATCTTCTTCAGCCTGGGCTTCGACGTTCGCGACCACTACAAGGACTTCGGCGGGGACGTGGCAGCCTATGTGGCACCCACCAACGACCTGAACGGCGTGCGCACGTACAATGCGGTGGACGTGGAGGGGCTGTACACGTTGGGCACGGTGGTGGTGGATTACCGAGGCTACCGTGTCACGGCCCAGTCCATCATCCCCGGCATCCTGGAGCGGGACCAGGAGCAGAGCGTCATCTACGGCTCCATTGACTTCGGCAAGACGGTGGTGTCGCACCCGCGGTACCTGGAGCTGCTGGAGCGCACGAGCCGGCCCCTCAAGATCCTGAGGCACCGGGTGCTCAATGACCGGGACGAGGAGGTGGAGCTCTGCTCCTCCGTGGAGTGCAAGGGCATCATCGGCAACGATGGGCGCCACTACATCCTGGACCTGCTGCGCACCTTCCCCCCTGACCTCAACTTCCTGCCCGTGCCCGGCGAGGCGCTGCCCGAGGAGTGCGCCCGTGCTGGCTTTCCCCGCGCGCACCGCCACAAGCTGTGCTGTCTGCGCCAGGAGCTGGTGGACGCCTTCGTGGAGCACAGGTACCTGCTCTTCATGAAGCTGGCTGCCCTACAGCTGATGCAGCAGAAGGCCAGCAAGATGGAGAGCCCCACGTCCCTGGAGAACGGCGACGGCCTGTCCTCGGAGTCCAAGCCTGACGCTCCCCCAGCGCCCGAGGCGGGAGGCGAGGAGGAGGGCAGCAGTGCTAGCGGCCTGGCCACGGTGAAGGAGCTGGCAGAGACCGTTGCCTCGGACGACGGGACAGACCCTCGGGGTCGGGAGGTGATCCGCAACGCGTGCAAGGCAGTGGGTTCCATCAGCAGCACGGCCTTCGATGTCCGCTTCAACCCTGACATCTTCTCGCCAGGAGTGCGCTTCCCCGAGTCCTGCCAGGAGGAGGTTCGGGACCAGAAGCAGCTGCTGAAAGATGCCGCTGCCTTCCTGCTCTCCTGCCAGATACCTGGCTTGGTGAAGGACTTCACAGACCACGCGGTGCTGCCCATGGACGGGGCTACACTGGCCGAGGTGATGCGCCAGCGTGGCATCAACATGCGCTACCTGGGCAAGGTGCTGGACCTGGTGATGCGGAGCCCGGCCCGTGACCAGCTGGACCACATCTACAAAATTGGCATTGGAGAGCTCATCACCCGCTCTGCCAAGCACATCTTCAAGACGTACCTACAGGGGGTCGAGCTCTCCGGGCTCTCGGCTGCCATCAGCCACTTCCTGAACTGCTTCCTGAGCTCCTACCCCAACCCTGTGGCCCACCTGCCCGCTGACGAGCTCATCTCCAAGAAGAGGAACAGGAGGAGGCGAAACCGGCCCCCAGGGGCAGCAGATAACACAGCCTGGGCCGTCATGACCCCCCAGGAACTTTGGAAGAACATCTGCCAGGAGGCCAAGAACTACTTTGACTTCAGCCTCGAGTGTGAGACGGTGGACCAGGCCGTGGAGACCTATGGGCTGCAGAAGATCACGCTGCTGCGGGAGATCTCCTTGAAAACCGGCATCCAGATCCTGCTGAAGGAGTACAGCTTCGACAGCCGCCACAAACCTGCCTTCACGGAGGAGGACGTGCTCAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGATGCCTTCCACTTCTTTCAGAGCGGGCAGGCCAAAGTACAGCAGGGCTTCCTAAAGGAGGGCTGTGAGCTCATCAACGAGGCCCTGAACCTGTTTAACAACGTGTACGGGGCCATGCACGTGGAGATCTGTGCCTGCCTGCGCCTGCTTGCCCGCCTCCACTACATCATGGGCGACTACGCCGAGGCCCTCAGTAACCAGCAGAAGGCCGTGCTAATGAGCGAGCGAGTGATGGGCATCGAGCACCCCAACACCATCCAGGAATACATGCACCTGGCGCTGTACTGCTTTGCCAGTAGCCAGCTGTCCACCGCCCTGAGCCTGCTGTACCGCGCCCGCTACCTCACATTGCTCGTGTTCGGGGAGGACCACCCTGAGATGGCGCTGCTGGACAACAACATCGGGCTGGTGCTGCACGGAGTGATGGAGTATGACCTATCGCTGCGCTTCCTGGAGAATGCGCTGGCCGTCAGCACCAAGTACCACGGGCCCAAGTCCCTCAAGGTGGCCCTCAGCCACCACCTGGTCGCCCGGGTCTATGAGAGCAAAGCCGAGTTCCGCTCCGCCCTGCAGCATGAGAAGGAAGGCTACACCATCTACAAGACGCAGCTCGGCGAGGACCACGAGAAGACCAAGGAGAGCTCCGAGTACCTCAAGTGCCTGACCCAGCAAGCCGTGGCCCTGCAGCGCACCATGAACGAGATCTACCGCAACGGCTCCAGCGCCAACATCCCGCCCCTCAAGTTCACAGCTCCCAGCATGGCCAGCGTCTTGGAGCAGCTGAACGTCATCAATGGCATCCTCTTCATTCCTCTCAGCCAAAAAGACTTGGAGAATCTGAAAGCTGAGGTGGCACGGCGGCAGCAGCTCCAGGAGGCCAGCAGGAACAGGGATAAGGCTGAGGAGCCCATGGCCACTGAGCCGGAGCCCGTGGGGGCCTCAGAGGATGCGGCCACCCAGCCCCCGGCTGCCAAGGACCCTTCCTCCCCGAGCTTGCAGGGGTAGAAGGGGAGAGACAGACGGACAGTCGGTCAGCTGCCCCCGGTGATCCAGACTCCAGGAGAAGGTGGCACGCCCTGCACATCAGGAGAGGAATCAAGTCCCTCTTCCTCCACATTTCCAACCCCATCCCCACCCCCAGCATCCTCCTGGGACCCGGGCCTGTCTGAACCCTGAGATGTTCTTGCACTGGTTCAATGAATACACGCTGCAGAGGCCTCATGGAAGACATGCGAATGGAGTGTGTGGGCATCCCCCAGTTCCCGGCTGGGGGACAGGTGCCTCTGTGGGTCCCCATCCTCGAGCAGGTGTGTGCGAGTACGTCCGTGCCTGCGAGTGCCCTGATCCATCCTTCCTGACTTGTACATAGCCCCGAGCCGGTCCCCAGTGAGTGACGCGCGGATGGGATTTCTCAGGTCATTTGTATGTGTGACATTACGGCTGCTGCTTCTGCTGCCACTGCCCCTGGGTCCGACGTGGCTGAAAGTCCAGTTCTGAAGCCAAAAAGAGTGGCACTTTCCTGTGTCCTGGGATTGAGCGGGCGGCCTGAGCTCTGCGGCAGGGCTGGAGGACTGGGGAGCACTTTAGCTTCGTGGCAGGGTGAGGGCCGCAGCAGCTTTACTGATCATGGTTGGAGCCTGGCCTGGCTGTGCTGGGGGTGGGGAAAGGGGTGGCCAGGGGCAGTTCCCCAGACACCCGTGTGCCCAGCCTCGCTTGTCGGCCCTCGGGCCCAGCAGGAGATGCTGCCTCCCGCTCCCTGCACCCCAGCTGGGGCTAACCTTGGGGTCTAGTCTGAATGTATCCTCCTTGTTGAACCTCAGCTGCCTAACGCACAGGGGGGGGTGGGGTGGGGGGCTAGGGGAACTAGGGCTGAATCATGGATCCTGGGGGAAGAGATACAAATACAGGAGTGATTACTTGGTGGTGGAGCCTAGCTCCCTACCTGACCTCGGCCACACTGGCACCTTCGACAGAGAGGAGCCCTGGGGGTGGCAGGGAGGGGCCTGCAGAAGGCTGTGGCCCCCACAGGTCCCAGCTCCCCCTCTGCTGCTGGCCTCTGCTGCTTCTCGGTGGCTGGGGAGAGACAGCCGTCCTTCTGAACTGGAGGGAGCTGTCCCCGTGTTGGGGCCTCTGCCTGGTGGCTTGGCGGGGAGCTGCTTATGGGTATGGTCTGTCCGAACACCTTGTTTCAAAGGGAGTGGGTGGGAGCTAGCAAGCGAGGCATCCCCACGGCTGATCAAGAACTTTTTCTTGTTTTTAAACCATCACGTCTTCATTTCACATTGGAATAAAGTGAGTTTTTGAAACCTGCTGTCCCAGCCTCTCCTGTGTGTTCTGTACAGTCTTATTCGATGGTGAGGATTGTTGCCAGAAGCAGTACCTAGTAAAAAGAGT EMBV3_43452 GCTTCTTCTTAGGAGCCAAAAAGGACAGGAGGGGACTGAGTTTTGGAGACTGCATCAAGG Gene BVV0102_029915 + 1 EMBV3_10829 GK000005.2:32106572-32118514 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35091 ACTGAAACTTCTCCTAAGAAAATAGAAGAGAATTGGTCCCTAGGAAAGACCTTCTTATAG Variant GeneID:618451|LYRM7:NM_001076505:72_cdna 197^278 1 EMBV3_25621 GeneID:618451 7 GENE LYRM7 MGC137049 Lyrm7 homolog (mouse) EMBV3_14739 GCTTTGATGAGCTGCACCGGCTATGCAAAGGTGGCCCACACTGTGCACATGAGTGCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24797 TGGACCGCAAGCAAGCTGGGCGGCGTTCCGAAACAGGAAAATGGCCTCACAGCTGAGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13803 CGACTTCCTGAAGCTGAGGACGATGCTCATGAAAGTAGAAAATGAGGACATGAATAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39001 GGTGACAATGAATGTGGTCTGCCTTGCTAGCCCTGAGCGGGATACTCTGGATGTATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_34784 CAGAAGTCAGAGTTTTCCCTCACTTCAGGTTAATTTTTCTTGCTTGTTTTCAGCTGTACC Gene BVV0102_072488 + 0 NULL GK000002.2:47459085-47524098 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32399 GCTGACCCAGGTGGCGGAGCAGTTCTCAAGTGGAAGGACTAAAAGTGGTGGAGATTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07587 ACACTGGGGAGAAAAGATGTTATAGGGTCAAAGGTCTTCAAGGCCCAGCTTAGAACATGG Gene BVT0102_153794 + 0 NULL GK000019.2:23924564-23933635 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05611 CCCACCCCTACCACTGGCAAATAATTGAAATAGTAACACTGTTAATGTTTTTAAGGTAAA Gene GeneID:280821|IGJ:NM_175773:8_cdna Constitutive 0 NULL GeneID:280821 6 GENE IGJ NULL immunoglobulin J chain EMBV3_33738 TACAGCTTTCTGGTTGCCCTGTTCCATACCATCATCACCTTCCGTCTAACCTACTGTGGC Gene GeneID:100299808|LOC100299808:XM_002693749:511_cdna Constitutive 0 NULL GeneID:100299808 15 GENE LOC100299808 NULL similar to olfactory receptor 154 EMBV3_05299 CAATATCCAAGTGTAGCCAGGGAAACCTAGATCCAGGAAGGAGAGTGTTGTGCCAGCATC Gene BVT0102_221829 + 0 NULL GK000013.2:75574218-75617762 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12181 CACCCCTAGGCACAGCCTCCCCTCTCTACCTGATCAATGTTAAATAGAAGCACCCCTGAT Gene GeneID:617482|KBTBD4:NM_001076463:108_cdna Constitutive 0 NULL GeneID:617482 15 GENE KBTBD4 MGC143250 kelch repeat and BTB (POZ) domain containing 4 EMBV3_08374 GCTGTGGGTGATGCCTGGAGGGACAGGGCAGGCTAAAAATGGTGAATTTCAAACAGAAAT Gene BVV0102_358731 + 1 EMBV3_39801 GK000011.2:48905319-48954368 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42398 GCCGAAGAATGAAGGCCCAGGAAGTAAATCTCCTCTGGAGAAACAATCTCTGCATCAACC Gene BVT0102_308018 + 1 EMBV3_27191 GK000008.2:65373696-65414611 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225681 1 XLOC_137811 Coding TCONS_00225681 XLOC_137811 Coding Coding - 8:65381627-65383157 - TSS168904 1422 4 TCONS_00225681_1 61 0.708157524613221 2 0.0712884238064094 8.13280072285325e-05 8.12636883574769e-05 5.53157232889087e-05 7.49436585723994e-05 2.08319347976695e-05 0 0 0.000498577219529311 3.32917130983981e-05 0 0 0 4.03554924596879e-06 0 0 0 0 8.82240833450685e-06 8.57284921719552e-05 0.000213248130671304 0 0 2.10977448954379e-06 1.34736875033078e-05 0.000167283792726977 0.000128820048065517 0.000125670879764751 0 0 0 NM_174654.2 SLCO1A2 Bos taurus solute carrier organic anion transporter family, member 1A2 (SLCO1A2), mRNA. 6e-113 412 89.39 0.218002812939522 0 coding 0 0 0 0 -0.0664964603834051 0.612532822253962 0.0449813807406789 0.42627333979193 ACAAAGAAGAATGACTGGCCTCAGAGTCTGTTTTTTTTTAGCATCTCTTCCCTGTTCTCCTTAAGTAATGCTTGTGTGTGAGCTCAGTCGCTCAGTTGTGTTCGACTCTTCACGACTCCAGGTACTGCCAGGCTCCTCAGGTCCATGGGATTATCCCAGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCAGGGGATCTTCCTGACCCAGGGATCAAATCCATGTCTCCTGAGTCTCCTGCATTGGTAAGCAGATTCTTAACCACTGAGCCACCTGGGGAGCAATGCTATTACTTAAGATGCCTCCAGATATCTTCACCTGGATAACCCATGGGTACTCCAAATTTAACATACAAAACCCAAATCTGCATCCAAATGTTTCCCTCCTGTCTTCCCAATTTCTGTAAATGGCTCCTCCATCCACCCAATCAGCCAAGCTATACTATTATTGCAAATCTCTGGACAGAAAAAATTCATTTATTTCCCATCGTTCTCCAAATTTAACATTCATTGGAATCATCTGGAAAGCTAATTAAAGCACAGTTTCCTGAGACTCATGCCCAGAAATTCTAATTCAACGGTCTGGAATGGGATCTATGAATTTGCAATTCTAACAAGCTCACAGGTGACAGCAGGGCTGTTGGGCCAGGGTCCACAGTTTGAGAACCACTGCCCTAGATAATGAAAAAAACATAGACACATTTCTGTGAGCCGTCAAATCCCTACTCGGTGAGCAATCATTGCCGAAGAATGAAGGCCCAGGAAGTAAATCTCCTCTGGAGAAACAATCTCTGCATCAACCAGAGACAGGATGAATTAATGAAATGGCATGGGATTTAATTATTCCTTCATTCATCAACCATGTTTTGAGTGCCTACGCTCTGCTCGGCACAGTACAAGGCGCTGAGCTATACAATGCTGGATAAAAAAATGACATAATCCAAGTTTTAACAAGTGAACTCAGGCACTCTATTGAGACTGTAAATTGGGAATCATAATGCCATTGCGTAGGCTTTATGAGAGATATCAAAAAGAAGACTTATAGTAAGTGCCTAGTTCAGTGCCTGGAGCATTGATTCTCAATAAGGATAATGAACAATTGGTAACTAGAAGATACTAAGAACAGGTGGCAAGAATACACAGAAGAACTGTACAAAAAAGATCTTCATGGCCCAGATAATCACGATGGTGTGATCACTGACCTAGAGCCAGACATCCTGGAATGTAAAGTCAAGTGGGCCTTAGAAAACATCACTATGAACAAAACTAGTGGAGGTAATGGAATTCCAGTTGAGCTATTTCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCGAATCCCAAAGAAAG TCONS_00225676 TCONS_00225677 TCONS_00225678 TCONS_00225679 TCONS_00225680 s 3' 6834 TCONS_00225676 TCONS_00225677 TCONS_00225678 TCONS_00225679 TCONS_00225680 s 3' 6834 EMBV3_37046 GTCTACACAGGAAGCTGGAAAGATGACAAGGGTGGAAGGTGAAGGACAATATACTGATAT Variant GeneID:616607|MORN2:NM_001076428:173_cdna 274^410 2 EMBV3_12958 GeneID:616607 11 GENE MORN2 MGC133493 MORN repeat containing 2 EMBV3_19589 GCCAGTAATCTGCCGCGGTGGGCACTGTGGTTTTTATGCATGTCTCGCCTTTATCTCCAA Gene BVT0102_235310 + 0 NULL GK000016.2:49429482-49533932 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41584 GAGACTCACCAGGTAGGTTCACAGGGAGAAATATGAGTGGGCAAGTGGCATCAACATTGG Gene GeneID:781112|LOC781112:XM_002700035:139_cdna Constitutive 0 NULL GeneID:781112 X GENE LOC781112 NULL similar to P antigen family, member 3 (prostate associated) EMBV3_42997 TTGTGTAATCCAAGTCAGCCCTCTGCTACCACTTTTTTTTCCTGCTTGTTTTTACAAAAG Gene GeneID:506130|KIAA1737:NM_001075242:88_cdna Constitutive 1 NULL GeneID:506130 10 GENE KIAA1737 MGC139327 KIAA1737 EMBV3_02204 AGAGAGCCTTTGGATTGCTAGAAAAGGAAATGTTGGAAAGCACAGGATGGTGGGGGTGGG Gene GeneID:532060|KCNJ11:NM_001081598:158_cdna Constitutive 0 NULL GeneID:532060 15 GENE KCNJ11 NULL potassium inwardly-rectifying channel, subfamily J, member 11 EMBV3_38481 CCAACAGCCATACTTAGCCTGAGCGGGAGCCCAGCCTGTAACTTATGTAAAGGGTAACCT Gene GeneID:788992|FMNL1:XM_002696051:353_cdna Constitutive 0 NULL GeneID:788992 19 GENE FMNL1 NULL formin-like 1 EMBV3_08960 TGGAATGGCAGTGCTGAGGGTCTAGGCAAGGTGGAGCATGAGGACAGAGGCCCTCTGGCA Gene GeneID:788842|LOC788842:XR_084651:776_cdna Constitutive 0 NULL GeneID:788842 25 PSEUDO LOC788842 NULL similar to RIKEN cDNA 6430598A04 gene EMBV3_43139 CACTAGACCTGCATTTTAGAGTCTCCCAGAGGCTGCCAGAGTGATTGTAATTCTGCTTTC Gene GeneID:280812|GYG1:NM_001045867:5_cdna Constitutive 0 NULL GeneID:280812 1 GENE GYG1 GYG MGC137720 glycogenin 1 EMBV3_05884 CAAGGTAGGAGGAAAACTTACTGTTTGGTTCAGGTCGCTTCTGAGCCTTTTCGGGGAACC Gene BVV0102_402879 + 0 NULL GK000003.2:46909909-47267915 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177299 1 XLOC_107073 NonCoding TCONS_00177299 XLOC_107073 NonCoding NonCoding - 3:47218939-47219100 - TSS132058 161 1 TCONS_00177299_1 48 1 0 0.00048412206918104 2.35060372283053e-05 6.15125944221712e-05 2.17558337508834e-05 3.18543338807159e-05 2.66257025230555e-05 1.44613183839298e-05 9.65469372066069e-05 2.28103302693077e-05 1.27778990506871e-05 0 1.23384445711907e-06 3.14655857655273e-05 2.9217363860973e-06 1.8396826611582e-05 0.000510538171708817 0.000135189666729376 0.000606150866417618 2.10239185053094e-05 8.12279341903458e-05 3.06094737773927e-06 4.68178659048635e-05 5.63258910449609e-05 8.44091819393766e-05 0 0.000169133228139048 4.56962359981819e-05 1.09375986539718e-05 2.21441530155181e-05 0.000559455794543745 XR_233643.1 LOC101906753 PREDICTED: Bos taurus uncharacterized LOC101906753 (LOC101906753), 6e-76 286 99.38 0.993788819875776 0 noncoding 0 0 0 0 -2.0448662141511 0.0063196790153044 -0.154695617100503 0.0363343375272233 GAACACATGACTGAGGCTAGGGGTGAGGCAGTACATGTATGTGCCAGGATACTCCTAAAGTATACTCTTAACGTAGATGAGGAGAACAAGGTAGGAGGAAAACTTACTGTTTGGTTCAGGTCGCTTCGGAGCCTTTTGGGGGAACCGACCTGAAGCCAGAG TCONS_00173199 . 5' 306617 TCONS_00173199 . 5' 306617 EMBV3_40892 CTCTTGCCTTGTTCCTACTCTCTGTAGCTGAACTCCTTGAAAGGTTGTCCGCCCACGCTT Gene BVT0102_062798 + 1 EMBV3_23830 GK000012.2:81287033-81548488 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041222 1 XLOC_025029 NonCoding TCONS_00041222 XLOC_025029 NonCoding NonCoding - 12:81318869-81319345 - TSS30723 476 1 TCONS_00041222_1 45 1 0 0 0 0 0 0 0 0 0 0.000314942654548528 0 0 0 0 0 0 0 0 0 0 0 2.55103679693947e-05 0 0 0 0 0 0 0 0 0 0 noncoding CCAAGGAAATCTGAAACTTACAAAGCTACTACTATTACTAAAAACACGGATTCTGAATCTTCCCTCCATCCTGCTTTTCCTCCAGTATCAGAGTCCTATCTTAGATCAGTATCTCCCTCTTCACTGGACCCGAGTCATAGGCATTTCATGAACCCCAAACCTTCCTCCCCTCCAGGTGCCCTTCCAGCTGCCCCTCTTGCCTTGTTCCTACTCTCTGTAGCTGAACTCCTTGAAAGGTTGTCTGCCCACGCTTCTCTGGTCTCCCAGATCGCACTCAGTTCTTGATTTCTGCATTCCACTGAAACTGTCTTGGCTACCTGCAGTTAGTAATACAAAGGACACTGTCCTACTTCGTTATACCTAATCTCTTAGCAAAGTTCTTTCTTCCTTCTTAGAACACTCTGGTAAGGGCGATAATCCGCCCAGTTCCCCCTCCAGTCTCCTTGGCTTGCTCTGGGTCTGCTTCTTGATAACAT TCONS_00037428 TCONS_00037429 TCONS_00037430 . 5' 7461 TCONS_00037428 TCONS_00037429 TCONS_00037430 . 5' 7461 EMBV3_27431 AGCTCCAGCAGTCCCTTCCATTTTTACGTTCCTGTGAATTTAGAATAGAGTGACAAATAT Gene GeneID:507462|SNX16:XM_002692833:192_cdna Constitutive 3 NULL GeneID:507462 14 GENE SNX16 NULL sorting nexin 16 EMBV3_09226 GCCAGGCCCTGTGGATTAACGCTTGCTTCTGCAATCTGAGCTGTCGAAATCCCAACGATA Gene GeneID:539163|WISP1:XM_002692603:11_cdna Constitutive 0 NULL GeneID:539163 14 GENE WISP1 NULL WNT1 inducible signaling pathway protein 1 EMBV3_28562 GGTGTTCTTAGCTTCATCCTCTTTCCCATTTTGCCGATCCCCCATCCTCAGACATATGCC Gene GeneID:100124498|XPO7:NM_001102542:52_cdna Constitutive 0 NULL GeneID:100124498 8 GENE XPO7 MGC142560 exportin 7 EMBV3_40353 CATCAGTGCTTACCCCATTAAGGAAAGAGATGACTGCAAAACCATGAGACACGCACCTGC Gene GeneID:536504|PHTF1:NM_001076077:155_cdna Constitutive 0 NULL GeneID:536504 3 GENE PHTF1 MGC142924 putative homeodomain transcription factor 1 EMBV3_27883 GTTTGACCAAGATGGGAACGGCGTCCTAGACGAGAAGGAGCAGAAGGAGACGCAGCAGAA Gene GeneID:521231|PKD2L1:XM_002698489:564_cdna Constitutive 0 NULL GeneID:521231 26 GENE PKD2L1 NULL polycystic kidney disease 2-like 1 EMBV3_08859 CCAGTCTTGGCATCTTCGAAGTAAGGAGAGGAAATCATCGAGTTCCCCATCCTGAAGCTA Variant GeneID:540516|ERI3:NM_001113242:277_cdna 443^720 5 EMBV3_36547 GeneID:540516 3 GENE ERI3 MGC134375 PRNPIP ERI1 exoribonuclease family member 3 EMBV3_00586 GCTAGTTTGTCTCCAGTTTTCTTCTGCTTCTGCCTTAGGCTTCCAAAAGTGAATAGTGGG Gene GeneID:782045|CYSLTR1:NM_001099726:2_cdna UTR3_Alt 1 NULL GeneID:782045 X GENE CYSLTR1 NULL cysteinyl leukotriene receptor 1 EMBV3_12518 CCTGTTGCAATGTGGTAGAAAATGCACATGCACAAAGATTAGCACACCTAAAAGCAGAGG Gene GeneID:615823|FGF12:NM_001079789:132_cdna UTR3_Alt 2 NULL GeneID:615823 1 GENE FGF12 NULL fibroblast growth factor 12 EMBV3_14778 CTCTTGCTGAGGACCCTGTGGTCCTACACATTTGAGGAGTTCCCTTCATTTTTCTGATCC Gene GeneID:281725|CRYL1:NM_174293:8_cdna Constitutive 0 NULL GeneID:281725 12 GENE CRYL1 NULL crystallin, lambda 1 EMBV3_22022 TGCCTGGGCACCATGGAAGTGAAGAGCAAGAAGAAGCAGACTACAGTGCCTTTGGTACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40100 GGCGTGGGGAGAAATTAAGTTTCAGTAGATTTCCTGTGCCATGTTCATCAGATAACTGGT Gene BVV0102_089708 + 0 NULL GK000008.2:96252154-96274034 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228688 TCONS_00228690 TCONS_00228685 TCONS_00228686 TCONS_00228689 TCONS_00228687 1 XLOC_138566 Coding TCONS_00228689 XLOC_138566 Coding Coding ABCA1 8:96270620-96408210 j TSS170437 10358 1 TCONS_00228689_12 2261 50 0.925081220155681 4.14776234813917e-05 4.64593329828499e-16 3.49532326670547e-05 3.74320430446458e-15 2.71682638011017e-48 5.55155686228689e-17 0.000131884251009273 2.14574221121653e-17 1.91186693493085e-16 1.76800875296592e-13 1.07218792929276e-11 6.71458499471238e-07 3.88887990157881e-13 8.2257482909341e-10 4.02417086894183e-12 0.00405558670350448 0.00328621527217511 0.00445507552709646 2.42907209665948e-12 2.76621627987062e-12 1.98602432495005e-13 0.00275174797189017 0.00210068714978228 0.00346617963338061 1.82099523152967e-05 3.1630802918335e-14 5.25456485565273e-36 0.000485793810196991 1.73398949731581e-05 0.000473028056971486 NM_001024693.1 ABC1 Bos taurus ATP-binding cassette, sub-family A (ABC1), member 1 0.0 1.236e+04 99.83 0.664703610735663 NM_005502.3 ABC1 Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 1 0.0 1.209e+04 86.27 0.984166827572891 TCONS_00228689_12 sp|O95477|ABCA1_HUMAN ABCA1_HUMAN ATP-binding cassette sub-family A member 1; 0.0 4383 94.65 0.999557717823972 0 coding 0 0 1 1 0.0159368871502397 0.896759851763522 0.0274479110903844 0.608810465962243 TTCCCGAAGGGTTTTTCAAGGGGTTGGGGAAAGAGCCACAAACACAAAAGTGGAAAACAGTTAATGACCAGCCACAGCGTCCCTGCTGTGAGCTCCAGCCACTTCCTTCCCGGGCTCCCGAGCCTCACGCAGGCTGCTGTGGTGCTGGCTGAGGTAACATGGCTTACTGGCCTCAGCTGAGATTGCTGCTGTGGAAGAACCTCACTTTCAGAAGAAGACAAACATGTCAACTGTTTCTTGAAGTGGCCTGGCCTCTATTCATCTTCCTGATCCTGATCTCCGTGCGGCTGAGCTATCCACCCTATGAACAACATGAATGCCACTTTCCAAACAAAGCCATGCCTTCTGCAGGAACACTTCCTTGGGTTCAGGGGATTATCTGTAACGCCAATAACCCCTGTTTCCGTTATCCAACTCCTGGTGAGGCTCCGGGAGTTGTTGGAAACTTTAACAAGTCCATTGTGTCTCGCCTGTTCTCAGACGCTCGGCGGCTTCTCTTGTACAGCCACAGAGACACCAGCATGAAGGACATACGCAAAGTTTTGAAGACGTTATACCAGATCGAGCGTTTCAGCTCACGCTTGAAACTTCAGGACTTCCTGGTAGACAATGAAACCTTCTCTGGATTCCTGCATCACAACCTCTCCCTGCCAAGGCCAACTGTGGACAAGATGCTGGGGGCTGATGTCAGTCTCCGCAAGGTATTTTTGCAAGGCTACCAGTTACATTTGAGCAATCTGTGCAATGGATCAAAATTGGGAGAGGTGATTCGACTTGGTGACCAAGAAGTTTCTAGGTTTTGCAGCCTGCCAAGGGAGAAGCTGAATGCAGCACAACAGGTGCTTCGTTCCAACCTGGATATCCTGAAGCCAGTCCTGACAAAACTAAACTCTACATCTCTCTTCCCGACCGAGGAGCTGGGTGAAGCCACAAAAGCTTTGTTGGATAGTCTTGGGAATCTGGCCCAAGAGCTGTTCAGCATGAGGAGCTGGAGTGACATGCGGCAGGAGGTGATGTTTCTGACCAACGTGAACAGCTCCAGCTCCTCCACCCAGATCTACCAGGCCGTGTCCCGCATCATCTGCGGCCATCCCGAGGGCGGGGGCCTGAAGATCAAGTCCCTGAACTGGTACGAGGACAACAACTACAAGGCCCTCTTCGGAGGCAACGGCACGGAGGACGACGCTGGCACCGTCTATGACAACTCTACATCTCCTTATTGCAATGATTTGATGAAGAATCTGGAGTCCAGTCCTCTTTCTCGCATCATATGGAAAGCTCTCAAGCCCCTGCTTGTTGGAAAGATCCTGTATACACCTGACACTCCAGTCACAAGGCGGCTTATGACTGAGGTGAATAAGACCTTCCAGGAACTGGCTGTGTTTCATGATCTAGAAGGCATGTGGCAAGAGCTCAGCCCCAAGATCTGGACCTTTATGGAGAGCAGCTCAGAAATGGACCTTGTCCGGACACTGTTGGACAGCAGAGGCAATGATGACTTTTGGGAACAGCGACTGGAAGGCTCAGACTGGACGGCCAAAGATATCGTGGCATTTCTGGCCAAGCACCCAGAGGATGTGCAGTCCACCAACGGCTCTGTGTACACCTGGAGAGAAGCCTTCAATGAGACCAACCAGGCAATCCAGACCATCTCTCGTTTCATGGAGTGTGTCAACCTGAACAAGCTAGAACCAGTAGCGACAGAGGTTCTGCTCATCAACAAGTCCATGGAGCTCTTGGATGAGCGCAAATTCTGGGCTGGGGTAGTGTTCACTGGAATTGCTCCCGGCAGCGTCGAGTTACCGCATCATGTCAAGTACAAGATCCGGATGGACATTGACAATGTGGAGAGGACGAATAAGATCAAGGACGGGTACTGGGACCCTGGTCCTCGGGCTGACCCCTTTGAAGATATGCGGTATGTCTGGGGAGGCTTCGCTTACTTGCAGGATGTGGTGGAGCAGGCAATCATCAGGGTGCTGACGGGCACAGAGAAGAAAACTGGCGTGTACATGCAGCAGATGCCTTACCCCTGTTATGTTGATGACATCTTCCTGCGGGTCATGAGCCGGTCCATGCCTCTCTTCATGACGCTGGCCTGGATCTACTCGGTGGCTGTGATCATCAAGGGCATTGTGTACGAGAAGGAGGCACGGCTGAAAGAGACCATGCGCATCATGGGTCTGGACAACGGTATCCTCTGGTTCAGCTGGTTCATCAGCAGCCTCATCCCTCTGCTCGTGAGCGCCGGCCTACTGGTGGTCATCCTGAAATTAGGAAACCTGCTTCCCTACAGCGACCCCAGCGTGGTGTTTGTCTTTCTGTCTGTGTTCGCCACGGTGACCATCCTGCAGTGCTTCCTGATCAGCACGCTCTTCTCCAGAGCCAACCTGGCGGCCGCCTGTGGGGGCATCATTTACTTCATGCTATACCTGCCCTACGTCCTGTGCGTGGCGTGGCAAGACTACGTGGGCTTTACCCTCAAGATCTTCGTGAGCCTGATGTCTCCTGTGGCTTTTGGGTTCGGCTGTGAGTACTTCGCCCTTTTCGAGGAGCAGGGCATTGGGGTACAGTGGGACAACCTCTTTGAGAGCCCCACAGAGGAAGATGGCTTCAACCTCACCACCTCCGTCTCCATGATGCTGTTTGACACCTTTCTCTATGGGGTGATGACGTGGTACATTGAGGCTGTGTTTCCAGGCCAGTATGGAATCCCCAGGCCCTGGTATTTCCCTTGCACTAAGTCCTACTGGTTTGGCGAGGAAAGTGATGAGAAGAGCCACCCTGGTTCCAGCCACAAGGGAGCATCAGAAATCTGCATGGAGGAGGAACCCACCCATCTGAAACTGGGTGTGTCCATTCAGAACCTGATGAAGGTTTACCGGGATGGCATGAAGGTGGCTGTGGATGGCCTGGCCTTGAATTTCTACGAGGGGCAGATCACCTCCTTCCTGGGCCACAATGGAGCTGGCAAGACCACCACCATGTCCATCCTAACTGGGTTGTTCCCTCCTACCTCGGGCACTGCCTACATCCTAGGGAAAGACATACGCTCCGAGATGAGCACCATCCGGCAGAACCTGGGGGTCTGTCCCCAGCATAACGTGCTGTTTGACATGCTGACTGTCGAGGAGCACATTTGGTTCTATGCCCGCCTGAAAGGGCTCTCCGAGAAGCATGTGAAAGCTGAGATGGAGCAGATGGCCTTGGATGTTGGGTTGCCGCCCAGCAAACTGAAAAGCAAAACAAGTCAGCTGTCAGGTGGAATGCAGAGAAAGCTGTCTGTGGCCTTGGCCTTTGTTGGGGGATCCAAGGTTGTCATTCTGGATGAGCCCACAGCCGGTGTGGACCCTTACTCCCGCAGGGGGATATGGGAGCTGCTGCTGAAGTACCGACAAGGCCGCACCATTATCCTCTCCACACACCACATGGACGAGGCAGACATCCTGGGGGACAGGATCGCCATCATTTCCCATGGGAAGCTCTGCTGCGTGGGCTCCTCCCTGTTCCTGAAGAACCAGCTGGGGACAGGCTACTACCTGACCCTGGTCAAGAAGGACGTGGAGTCTTCCCTCAGCTCATGCAGAAATAGCAGTAGCACTGTGTCATACCTGAAAAAGGAGGACAGTGTTTCTCAGAGCAGTTCTGATGCTGGCCTGGGCAGCGACCATGAAAGTGACATGCTGACCATCGATGTCTCTGTGATCTCCAACCTCATCAGGAAGCATGTGGCTGAGGCCCGGCTGGTGGAAGACATTGGGCATGAGCTGACCTACGTGCTGCCCTACGAGGCTGCCAGAGAGGGAGCCTTTGTGGAACTCTTCCATGAAATTGATGACCGGCTCTCAGACCTAGGCATCTCCAGTTACGGCATCTCAGAGACTACTCTGGAAGAAATATTTCTCAAAGTGGCTGAAGAGAGTGGAGTGGATGCCGAGACCTCAGATGGCACCTTACCAGCAAGACGAAACAGACGAGTCTTTGGGGACAAGCAGAGCTGTCTTCGCCCTTTTACTGAAGACGATGCTATGGATCCAAATGATTCTGACATAGATCCAGAATCCAGAGAAACAGACCTGCTCAGTGGGATGGATGGTAAAGGTTCCTACCAGGTGAAGGGCTGGAAGCTCACACAGCAGCAGTTTGTGGCCCTTTTGTGGAAGAGACTGCTGATTGCCAGACGGAGTCGGAAAGGATTCTTTGCTCAGATTGTCCTGCCAGCTGTGTTTGTCTGCATCGCCCTGGTGTTCAGCTTGATTGTGCCACCCTTTGGCAAGTACCCCAGCCTGGAGCTTCAGCCCTGGATGTACAATGAACAGTACACATTTGTCAGTAATGATGCGCCTGAGGATGTGAGCACCCAGGAACTCTTAAACGCTCTCACCGGAAAGCCTGGCTTTGGGACCCGATGTATGGAAGGAAACCCGATCCCAGAAACGCCCTGCTTGGTGGGAGAGGAGAAGTGGAACACTGCCCCAGTCCCCCAGACCATCACGGACCTCTTCCGAAATGGAAACTGGACAATGGAGAACCCCTCCCCCACCTGCCAGTGTAGCAGCGACAAAATCAAGAAGATGCTGCCTGTGTGCCCCCTGGGGGCAGGGGGGCTGCCTCCGCCTCAAAGAAAACAGAATACTGCTGACATCCTTCAGAACCTCACGGGAAGAAACATTTCGGATTATCTGGTGAAGACATACGTGCAGATCATAGCCAAAAGCTTAAAGAACAAGATCTGGGTGAATGAGTTTAGGTACGGTGGATTTTCCCTGGGTGCCAGTAATTCTCAGTCACTTCCTCCGAGTGAAGAAGTTAATGATGCCATCAAGCAAATGAAGAAACACTTGAAGGTGGTGAAGGACAGTTCTGCAGACCGATTTCTCAGCAGCTTGGGAAGGTTCATGACAGGACTGGACACAAAAAATAACGTCAAGGTGTGGTTCAACAACAAGGGCTGGCACGCCATCAGCTCTTTCTTGAATGTCATCAACAATGCCATTCTCCGGGCCAATCTGCAGAAGGGAGCGAACCCCAGCCAGTATGGGATTACTGCTTTCAATCACCCGCTGAACCTCACCAAGCAGCAGCTCTCAGAAGTGGCTCTGATGACCACATCCGTGGACGTCCTCGTGTCCATCTGTGTCATCTTCGCGATGTCCTTTGTCCCGGCCAGCTTTGTCGTGTTCCTGATCCAGGAGCGCGTCAGCAAAGCGAAGCACCTGCAGTTCATCAGTGGAGTGAAGCCTGTCATCTACTGGCTCTCCAATTTTGTCTGGGACATGTGCAACTACGTGGTTCCTGCCACGCTGGTCATTATCATCTTCATCTGCTTCCAGCAGAAGTCCTATGTGTCCTCCACCAACCTGCCTGTGCTCGCTCTTCTACTTTTGCTGTATGGGTGGTCCATCACACCTCTCATGTACCCAGCCTCCTTCGTGTTCAAGATCCCCAGCACAGCCTACGTGGTCCTCACCAGCGTGAACCTCTTCATCGGCATCAATGGCAGTGTGGCCACGTTTGTACTGGAGCTCTTCACCAACAATAAGCTGAATAACATCAATGATATCCTGAAGTCAGTGTTCTTGATCTTCCCACATTTTTGCCTGGGACGGGGGCTCATTGACATGGTGAAAAACCAGGCAATGGCTGATGCCTTGGAAAGGTTTGGGGAGAACCGCTTTGTCTCACCACTGTCTTGGGACTTAGTGGGACGAAATCTCTTTGCCATGGCTGTGGAAGGAGTGGTGTTCTTCCTCATCACTGTGCTGATCCAGTACCGATTCTTCATCAGGCCCAGACCTGTAAAGGCAAAGCTTCCTCCTCTGAATGATGAGGATGAAGATGTGAAGAGGGAAAGACAGAGAATTCTTGATGGTGGAGGACAGAATGACATCTTGGAAATCAAGGAGTTGACTAAGGTATACAGAAGAAAGAGGAAACCTGCTGTTGACAGGATCTGCGTTGGCATTCCTCCTGGTGAGTGCTTTGGACTTCTGGGTGTTAATGGAGCTGGGAAATCATCAACTTTCAAGATGTTAACGGGAGATACCACTGTTACCAGAGGAGATGCTTTCCTTAACAAAAATAGTATCTTATCAGACATCCATGAAGTCCATCAGAACATGGGCTATTGCCCTCAGTTTGATGCCATCACAGAGCTGCTGACTGGAAGAGAACACGTGGAGTTCTTTGCCCTTTTGAGAGGAGTCCCAGAGAAAGAAGTAGGCAAGGTTGGCGAGTGGGCGATTCGGAAACTGGGCCTTGTGAAGTATGGAGAAAAATATGCTGGGAACTACAGTGGAGGCAATAAGCGCAAGCTCTCAACAGCCATGGCTTTGATTGGTGGGCCTCCAGTGGTGTTTCTGGATGAACCAACCACAGGCATGGACCCTAAAGCCCGGCGCTTCCTGTGGAATTGTGCCCTAAGTATCATCAAGGAAGGGAGATCAGTAGTGCTTACCTCTCACAGTATGGAAGAATGTGAAGCTCTCTGCACTAGGATGGCCATTATGGTCAACGGGCGGTTCAGGTGTCTTGGCAGTGTTCAACATCTGAAAAATAGGTTTGGAGATGGTTATACAATAGTTGTACGAATAGCAGGGTCGAACCCTGACCTGAAGCCTGTACAGGAGTTCTTTGAACTCGCCTTTCCAGGAAGCGTCCTGAAGGAGAAGCACCGGAACATGCTTCAGTACCAGCTTCCGTCTTCACTGTCTTCCCTGGCCAGGATTTTCAGCATCCTTTCCCAGAGCAAAAAGCGACTCCACATAGAAGACTACTCTGTCTCTCAGACAACACTTGACCAAGTATTTGTAAACTTTGCCAAGGACCAAAGTGATGATGACCACTTAAAGGACCTGTCATTACACAAAAACCAGACAGTAGTGGACGTTGCAGTCCTCACATCTTTCCTGCAGGATGAGAAAGTGAAAGAAAGTTATGTATGAAGAATCTTGTCCATATACGGTGGCTGGAAGAAAGGAGAAACTAGACCTTCCTTTGTACCATGTGAAGTGTTCCAGAGGAAAGAGCTAGAAGATTTTGTGGGAAGAAGTAAACTGGATACTGTACTGATACTGTTCAATGCAATGCAATTCAATGCAATGAAAACAAAATTCCATTACAAGGGCAGTGCCTTTGTAGCCTATGTCTCATATGGCTCTCGAGTGAAAAAGACTTGAATTTAGTTTATTACCTTATACTCATGTGAAACTCTAGTATGGAACCCAGTGGACATATGAGTTTGACATACTTTTTTTGTTCCTTTGTATTTTTACTGGGGTTGCAACAATAATTCATCAAGTGATCATGGCCAGTGATTATTTTTCAAAATCAAAGGCATGCACATGCTCATTCATTATGCCATGCCATGCCAAGAGACTGGCTTCCCGGTGATATAGCCACTGCTGGCAATGAGTGTGCCAGAATTACTAGTGCCAAGTTTCTCAGAAAGCCTGAAGCACCATGGTATGCCTTGCACACTTTTGTGAGAGCTGCGCTACTCAGTCTGTTGACATCATCAAATACGGGTGATGAAATAGTGCCATGTGTGGGGAAAGTCCTGCTTTGATTCCCTCTTTGAGCTGCTCTGGTGATGGTGACATGCAAACTGCATGATGACATGCAAAAGCAAAACTTGGTTTCATTGTTGTCCCTTGCTTGGAACCATGAGTCTCTAAGATTATCTTTCTGGGACTCTAAGTATATTTAGATCCAGGTAAGAAGCAAAGAATCAGCAACGACATTGTTGGGGCTGCAAGCTGGGGAGGCCATGGCATGTGATGAAAGAGATGATGTATTTGGAATCAAGGGAAGTCTGTGTCCATTTGTCTTGCTTGTCTACTAACATGGTACAGTGCATCTCAAGATCTTGTCCTTTGACACAAGCATAGTATTATTTCTGGCTTTTTGAATTAATCTAGAATATGAAAATATGGAGTTGTATTTTGAGAACAATCTTTGTACTTTTAACCTTATTTGGAATTGTAAGTTCTATTAGTGACTTCTGAAAATTTAGAGTGGCCTCTTTGTAGAACCCTGTGGCACAGAGGAGTATGGCCACACTGCCTCGCTAGCTTTAATTTTTCACGTATGTTTGCAAATGGATTATCTGACTAATGCCTAGTGACTTGAAAACAGTATGATGGCCAAGATGTTATGACAACATTATATTTAAGCATCTTTAAGATCGTTAAGCATACTTTTAGTATAAGCTCATTAGTCAAGTATTCTTTGAGTGTACGTTATAACTGAGTGAGTATGGATGGATGGCGTGGGGAGAAATTAAGTTTCAGTAGATTTCCTGTGCCATGTTCATCAGATAACTGGTTTACAAATACAGGTTTTGTTGTGGTTGTGGGAACCCACTGAAAGAATATTGAAGCCCACTTTTTGAAAATAACAACAATGTAAAAGGCAAGAAAGCTTATGTCATAGGGTCACAAGATTAGCTTCAAAACTTGTTGAATAACATAAAACTTGTGCTTATGGCATTTAGTACCTTTGAATATTGGCTTTGAAAATCTCAGATACCCCATTCTGACAATCTCAAATTTTTTCTCTCTTCAGTCACTATCCCGGGAAAAAAAAAAAAGCAAATGCCCCCCCACATGAAAATTATTTCAGACTTTTCCAAGTCAGTTTAATTGTTTATAGTCAGTAAATACTTGTTAAAAATAATGTTATCTGTCTTGAGACAACAAAATTATGAAAGAAATACTGTTTGAAGTTAAACTGATCTTTTAATATCATTACTAATGTCTTTTCCTTTTAAAAAATTAGGTATTAATTCTAAAGTACAAGATTTCAGATCTATTCCAAGTATACATTTTTTCTTTTAAAATTTACTGCATGTTATCATGCGACTTGTTGCTTGGAGAAAAGAAAATGACCGTTAGAGAGTATTGACAATATTTTCTAAAATGATAAACAAGTAATAAAGACATTTTCCCAATAATTATTGGCCTAACCTCATATTTTATGCTGTCTTTAATGATATAAAATTCATAGAATGATTGTTTCTCCTTGTTTAGTATTTTCCAAAATTAAGCTTCTGCTAGATTCCCCATTTCAGCAGAATCATGTCCTAAATCTGTATTGTATTAAAACCATGAACAGCTCCTTTTTTTCGATTATTCTACTTCAAGGCCATATTAAAAAAAATCAAAAGATACTGTGAACTACTTTGAAAAATGCAACATTTCAATATGGATTTAAAAGCTATCTTAAGCTAGAAACAATCTACAGCTACTCATCTACTTCATTAGTACTGTTATTAGATATCCAAATTGCAGTCTTTAAAATTTTTCTGGGTAAGCCTAATTATAGTAGAGATTTTTACCAACTCTGCTCAGTCAAGTAAAATTTCTATATCATCCCTGTGGAAATGTAACCACGTGAGTTTAACAAAAAAAATTTTTTTGTAAGTGTTCAGAGATTTCTGCTTTTGCTTCTTTTGGACACCTGAAGCCTTATTAACTGTGAATATGAAAAAATACAAAAGAAAACAATAACAAAGCCCTCTATATACAGATACCCAGCATAGGTCATTGTTAAAAAACCAATAACCAAACCTCAAACTACTGTATTTCAGTATCTGTACTGAAGGCATATGCATTGTGACTATTAAATGTTGCACAACATTCACTGCATAGTAATCATTGACTAAAGGGATTTGTCTGTTTTCTTCTTGTGGTTGTATATATCAGGTAAAATGTTTTTTCCAAAGAGCCATGTGTCATATTATATTGAACCACTTTGACATTGAGATATTAATTTCTACTCTTGTTACCATTTACTAGTAATATAGTATTATAGAAATATTGTTCTAATTCTCTTCAGAATTGTTGCATCCCTTTTTATAGAATGTTTATACTTCCATAAGTTTTAAGAATTCTGTTCTCCCTTCTTATACCCTAGGATTAAACCATGTTTTTGTGCTTTTTCTTTATCATTGACCCTTCATTCCAAGCACTTTATGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTGAGAATTGCAAAACTAGACAAAAGTTTCACAATAGATTTCTAAGTTAAATCATTTTCATTAAAAGAAAAAAAAGAAAAAAAAATTTTGTATTGTCAATAACTTTATAGAAAGTATTAAAAAAAGGCATATTTCTATGTTGTTATAAGTCACGAAATAAACCTGTGATGGTTCTATTGCGGTCTATACTAATTTATTTTCGTGCATTCATAGCACCACCTACTGTTAAAGCTTATAAAGTCATTACAGAAGTAAGAAGTGTTTGCTTGGAGAAGGGAGGATACTTGGATCAAAAGCAGAAATTTAGAAAAGACTAAATGTCCTGTTAATCACAAGAGAATCAAGG EMBV3_33528 GCTTAACACGGTGAAAGAGCCTATCTTTTATAACACTCACCTCATCCTGCAGTCCTCCAC Gene BVV0102_098702 + 0 NULL GK000010.2:15092341-15103635 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012775 TCONS_00012774 TCONS_00012776 TCONS_00012772 1 XLOC_007923 Coding TCONS_00012776 XLOC_007923 Coding Coding FEM1B 10:15086025-15096700 j TSS9622 6451 1 TCONS_00012776_4 469 0.0058905596031623 2 0.395821622634439 0.000159201181882846 0.0022840124963749 0.00119596413454796 0.000661611504187958 0.000768393942479507 0.000295029600658533 0.000716227912916494 0.00168443929358078 0.00158360079727054 0.000247101733558482 0.000340292404208612 0.00010213501824875 0.000179243404574673 0.000120815757384622 0.000549881284377535 0.00445785639218468 0.00346871651959536 0.00285128535797596 0.000478914640216259 0.000175027707746678 5.99747258074238e-05 0.0015538488398028 4.93616054344108e-09 0.0022962767305341 0.000650737695931472 0.000934284346523509 0.000415579345674376 0.000622997410902944 3.95757380699367e-05 2.58816200666789e-09 NM_001192383.1 FEM1B Bos taurus fem-1 homolog b (C. elegans) (FEM1B), mRNA. 0.0 3662 99.95 0.315144938769183 NM_015322.4 FEM1B Homo sapiens fem-1 homolog b (C. elegans) (FEM1B), mRNA. 0.0 6796 84.37 0.969772128352194 TCONS_00012776_4 sp|Q9UK73|FEM1B_HUMAN FEM1B_HUMAN Protein fem-1 homolog B; 0.0 973 99.36 0.997867803837953 5 coding 0 0 0 0 0.0867971396743892 0.829418324411486 0.0684511396800222 0.360772966777356 TGCAGGCAGATTCTTTACCACTGAACCACCTGGGAAGCCCAAGTGAAGTATATTCTTGTATGTCATTGATGGTGCCACTGCTCTTTGGTGTGCAGCAGGAGCGGGACACTTTGAAGTTGTTAAGCTTCTAGTCAGTCATGGAGCCAACGTGAACCACACCACAGTAACTAACTCAACCCCGCTGCGGGCAGCATGCTTTGATGGCAGATTGGACATTGTGAAATACTTGGTCGAAAATAATGCCAACATCAGCATTGCCAACAAGTATGACAACACTTGCCTAATGATTGCGGCCTACAAGGGACACACCGACGTGGTCAGGTATCTTTTAGAACAGCGTGCTGATCCGAATGCTAAAGCACATTGTGGAGCCACAGCATTGCATTTTGCAGCTGAAGCTGGACACATAGACATCGTGAAGGAGCTGATAAAATGGCGTGCTGCTATAGTAGTGAACGGCCACGGGATGACGCCATTAAAAGTGGCTGCTGAAAGCTGTAAAGCTGATGTTGTCGAACTGTTGCTCTCTCATGCTGATTGTGACCGGAGAAGTCGGATTGAAGCTTTGGAGCTCTTGGGTGCCTCCTTTGCAAATGATCGTGAGAACTACGACATCATGAAGACATATCACTATTTATATTTAGCTATGTTGGAGAGGTTTCAAGATGGTGATAACATTCTTGAGAAAGAGGTTCTCCCACCAATCCATGCTTATGGGAATAGAACTGAATGTAGAAATCCTCAGGAACTGGAATCCATTCGGCAAGACAGAGATGCTCTTCATATGGAAGGCCTCATTGTTCGGGAACGGATTTTAGGTGCCGACAACATTGATGTTTCCCATCCCATCATTTACAGGGGGGCTGTTTATGCAGATAACATGGAATTCGAACAGTGTATCAAGTTGTGGCTTCATGCCCTGCACCTCAGACAGAAAGGTAACAGAAATACCCATAAGGATCTTCTTCGATTTGCCCAAGTTTTTTCACAGATGATACATTTAAATGAAACTGTGAAGGCCCCAGACATAGAATGTGTTTTGAGATGCAGTGTTTTGGAAATAGAACAGAGTATGAACAGAGTAAAAAATATTCCAGATGCTGATGTCCACAGTGCTATGGACAATTATGAATGTAACCTCTATACCTTTCTGTATTTAGTGTGCATCTCCACCAAAACACAGTGCAGTGAAGAAGATCAGTGCAAAATTAACAAGCAGATCTACAACCTGATTCACCTGGATCCCAGAACTCGTGAAGGCTTCACCCTGCTGCATCTAGCCGTCAACTCAAATACCCCAGTTGATGATTTCCACACCAATGATGTATGCAGCTTTCCGAACGCGCTTGTCACAAAGCTCCTGCTGGACTGTGGTGCTGAGGTGAATGCAGTGGACAATGAAGGGAACAGCGCCCTTCACATTATCGTTCAGTACAACAGGCCCATCAGTGATTTTTTGACCTTGCACTCTATCATCATTAGTCTAGTTGAAGCTGGCGCTCACACTGACATGACAAATAAACAGAATAAAACTCCGCTAGACAAAAGTACAACTGGGGTATCAGAAATACTACTTAAAACTCAAATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGGGCAGTTCGGGCTAATGACATTAACTACCAAGACCAGATCCCCAGAACTCTTGAAGAGTTTGTTGGATTTCATTAAGTGACTGGATATGTAAAATCGTTTAATGTGGTGCTAAAAAGTAAAGGACTTTAATCACAGCCAATAGAATTATGTGTTCATAAATTGTACTTTTCTTCCCACTACCCTCCCTCCCTACTTATCCTTCCTTGGTTTTGTATTTGGTCTTCTTGCCTCATATGGTTATTGATTTCAAATACACTTTAAACAAAGCCACATCGTTTAGGTTTGACTATAATCTTAAGGTGTTTGGATATTGGTCACTTAGCTATTTTTTTTTTCTTTTTTTTAAGGAATATAAAATATTTTGTTTATGTAACAAGGGACATTTATGATTTAAAATTGATAAATGTTTTACCAAAATTGCCTAGAAAAGCATTTCTGTTAAGCCTGTGTCAGCGTGTTACCCTTTGCAGCAGTTTTGAGGATTTCATGAAGGAAAACAACTAAAAGAAGCATTAAAAGTAATGGAATATCCACATGTTCTGCACATGCCAAACTGTGATAGGTGGTTTCCACTCTTCCATTATTTATGTGAAATGATACAACATATTATGACATCGGGAGGATTTTTAAAAAGTATAGCTGCAGATTAATCTGAAAAATGTGCTAACTTAATAATAGTTAAAAATGCATAAAGTTAAATCCATTGAAATTGTTGAATTATGCTCGGTGATACATACAAAATAGTAATCTTAAGCAACTTTTCAGAGAATATTGATGGACTATTTGCCTTTGGGCTTGGCTTCTAAAATGCATAGACATTTTGATGTGGTTAATCTAAATTCCAGCAGTCAACATTTGACTCAGCTCACAGACATGTAAAAATTATGATTGCTGTGTTTTCTCCTATGAAGCAAGTTGTCACATTACAGTTATACATTCTGTTTTTGTCCCCTTCTTCCTCTCTTCTTGTGTGGTATCTTTTCAAATTGAAAACTACTTTTCCAGAGGGCATTATTTGTGCCTCCCTAAGGTTTTTATGACAGGTGAAAAGGAACTGGGATATTTTTTTCACTTTCTTCATTTAGTCTGTGATAAGAAGTAGAAAAATCACTAGAGTGGTATAGATTCAGTGTTTTTGATGATGAAAATAATTCTCATTGCCATTTTGAAAGTTATTTCTGTCTGAGGGCAGCAAATTTTGGAGCCAGAAAATGTCACTTATTCCGACAGGCTGTACAGAGGTCTTTATGGTTTTGGTTTTGTTTTAATGGCAACATTTTGACTGTCAGACTAAAAGAATATTCTGTGATTATCTTTAAGCATCACAGAAATTCAAGGGTACATACCTATTTCTTTCAATGTTAAAAATGATAAGTAAAATTAGCTATATCTGTATTTTTTTCTCTAGTGCCAAATGAATGCCTTAGCTACTCATAGTGCATGGTACTGTAAGTGAAGACCTGCAGCTTTTTTTCTTTAATGAAAAGCATTATAATGGTGTAGCAACATCAGATATAAACGTAAAAAACAACAAGATTTCAGTTAACATTTTATGTATAGATATTGCTTTGTGAAGTCTAAGAAAAAGGTTGCAGCTGGATCAGTATAAAAGAGAGTGACCAAGCCAAAATCAGCACCTAGGGCCTTAAATAAAATAGAGATACCCCATGAAATGAGATACTCTGAAGGATGGGAGGGAATGGATGGGGGACTTTAAAAACCTATTCCCCCAAGAATGCAGGATCCTTTTACTGTTGCTGTAGTTATACTTTGCGTGTCTTCTTGCTTCAATTAGGAATGTTTTGATGGTGAATTCTGCCATAGTAATCTACTTCTGTTTTCCTAACCTGGGATTTTTACAAGAAAGGTTTTTAGGATGGTCTAAAGGGAGGTATTTGATCCCTAATTTGAAAATTACTGGCCTTGATCTTCCTGGTGTGAATCAAGGAACTAGTGTACCTTGCTCTTGGCAACTCTCGTGGCCTGAAAGAGAAAATGCTCATCCTCCAGGTGGGTGAATCACACCTTTTTCGCAGCTCCAATCAGACACTGTATTTTTCAGACTTCAAGGCCTGCTTATTTGACAGTCTGAGGAACAGCTGTGACACTTGGTATTTACTTGGTTCCGTTATTAATGCATATGATTTTTAAACATCAGAACTTAAAATATCAGATAATGTTGCATGTTTTATAAAACATTTCATCCCTTTGGCTACCCAGGATGAGAACTATTTTAGGTATTACGTACTTATTAAATGAGAATAATGATTATCTGTACATATTCAGGCAACGAAATTTAATGGTACTCAGTGTTTTTGAGAAGGGAGGACCAAATGCTGGAAAGAGTAAAACTGCTGATTGAAATGCTGACAAAGTTGAATTTGAAGCCAGTGGGATAGATTATGAATTTTGCTAATGGTAACTGAGATTTTTTTTTTTAACTATACTATAGCAGTACATTGTTCACTATATTGCTAAGGATCTAATTCTGTCTTGTAAAACAAATCCAAATATGTATTGTGAAACACCTGTATAAAACCATTCTTGAAACAAGTGATCTACATGCCTGTTTTTTTTTTTTTAATTTGTTTTTGATAGAATTATTTTAAAATGTGTTTAGCGAAACCCTTCCCACACTTAAGTTTCTTTTTTTTTTAAGGGAAATAAATATGTAAGGTGATAGTTCTGTATCTCAGCTTCTCTGAGAACTCTGGGCTATTGCTTTTTTTTAGCCACTTTTGTCCTTTTGTGTTTATTATTGGTAGAATTGTGTTTTAGATTATAAATCTTCCTTGATAACATTACAAATTCAATCAAAACTTCTTGCTTAATAATTGTCGTATAAATTTGAATTAGAGACCCAGGTGGATGAATGCCTGGGCAAACCATGTGAAACCTGGGTGGGTTTTGCACTTAAGAGTTGGTAAAATTGATCTCTTGAGTTTAGGTAACTGTATAGTTCAAGGAATGGGCAAGAAATCCATCCTTAGACTGATAAAAGGGAAATTTTTGACCTAAGAACTCTGAAACAACATTGTTTTCAGTCTACCCTGGATTGCTTTCTCGTAGGCCACAGTCCAACTATCTTAAGGTTTTTTGCTGTGTAAACTTCAACCAGCCAACAAGCCAATGAAAAAGCAAGCTTTGGTCTTGTTTGTTTCTGGGAAGGGTTTTATTTCATTACTCTGATAGTTGATTAGTAACTTGGTAATTATGAGAAACTTAGGTCTGCTAGCACTGTTTGAAGTAAAATGTGATTTGGGGCCAGCAGCTGCAGAAGTATCAACTCTGCATCTGGCAAGTGTTTTTGAAAATTAGATCCCAAGGGAACAATACCCTGTCACTAGTCACCACCTCAGCTGAGGCAGCTACTTTAGGAATAAGGTTGCTTTGGATTATTCGAGCAGAAACAGTTCTTTCTTGGGGCAAGGGGCAGGGTGAGGAGTGAGTTACTGCACCTTGGATTGCTTTGCTGGCTTTAGAAGCAGCCAGTGATTGAACTAGAGAGGAGATGGATAAAAGTATAAAGGACTTGCTTTTATGGTAGATTTTCTGTAAAAACCTTGAGTATTCCTTTCAGGCTAGCCAGATGTGTCAATGTACAGATGACTGTTCTGTTTTCCTCACTGACTATACTGTAACATTAAAATGGGTTAAAACAAAACTGCCTTTTGCTCTATGAAAAGTTATTAGTCCATAAGATTTTAAGCTGTGTGTTTACTCCTGCTCTGAAAATGCACAGCCCTGCTCTGGATACCCTCTCTGGAAGGTAGAGAGCTCCTAGTGTGTATGGCACATTGCCGGGCTTTCTCGTACATTCCTGGCAGATTTGCCCAAATCTTCAGATGGGCTGGGTAGTACAGTATCTTCTCCAAATGTGGGATCTGAAATAAATACTACATGGATAGTGGCGATAGATATATTAATTTTTAAAACTGTAAAGTAAATGTCTCTAGTCCTAGGTTTGTGGTGTGTTCATTTGTGTTACTGTGTAGGGAAGGAACACTGACTTAGTGGTTATGGGGAGTGTATCTTGATGTGTGTGCAGGGGTGAGAATCGCTAAATTAACAGCTTTTCATTTAGGGGTAAGTCACGTGTTGAGTGGCCTAATCAAAAAAATGAAGGAGTGAAGATACAAGCTTTGCCAAGTGATGAAATGAGCAAGGTTTTGTATCTGTTTTTTATCAGGTGTTGTAAAATTTGTGCATGGCCTTTTTTGTTGTTGCTTAGTTAATTGGTAGAGAAGAAAAGATGAGGGAGAAAATATTAGCTTTGCTAACCAGTCTTTTCAGACGTACATAGCTGAAGAGTAAAATCTGACTGGCTTAACACGGTGAAAGAGCCTATCTTTTATAACACTCACCTCATCCTGCAGTCCTCCACATAGAAGAATCCCATTGTTGTATTCTAGTAATTCACTGTGATTTATAACAAACCAGTGATGTCATCCTATTGTGCACTTTTGTCCAACCATTTACGTGACTTTAATAAACATAGTAAACTTGCTGACTGCACCAGAGGTCTGTTAGTGATTTATATATTGCATGACATTTTCTATTTGAGTTTGACATGTAGAATCATTTTTAATTTCGTAGTAATCGATAGTCCTAATAGCCCAGCTAATTTGAAACTAACAATATTGCTGTGTAAAAGGAAAAAATGGTGTTTGTGTTCAGTAAATGTTTGAAAAAAACTGCCTTGAAGTGTGTGTCTTTATTGTTCAGTGTTGAGATGATATTTTGTCAAATTCATTTTTTAAAAGTTGTGAAAGTTATACGTGTACGTGGGGGAAAGTTCAGATAAGAAAAATTCAAATAGTAAAAAAAAATTTC EMBV3_22930 AGGGCCAGCGGTAACATCTCAGGGGCTAGAGGAACTGTCCAGAGCTCAACTCAGATCTAA Gene GeneID:280784|EPO:NM_173909:23_cdna Constitutive 0 NULL GeneID:280784 25 GENE EPO NULL erythropoietin EMBV3_22418 CATTTCATGTTTGGCGGGCATGTGAGTGCACAAGATGGAAACAGCGATTTGGAGCATCCC Gene GeneID:510080|ANTXR2:NM_001076826:35_cdna UTR3_Alt 2 NULL GeneID:510080 6 GENE ANTXR2 MGC143297 anthrax toxin receptor 2 EMBV3_37353 CCAGGACTGAGGTAGCGCTCCTAGCTCGAACCAAACAGGGAATTTAAGACAGCGAATGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16076 CTGAGGTGCCTCCGGATGGGATAGAATAAGATACTGGCCTTGGACAGCTAAGGTTCATAG Gene GeneID:100140540|LOC100140540:XM_002697243:433_cdna Constitutive 0 NULL GeneID:100140540 23 GENE LOC100140540 NULL hypothetical protein LOC100140540 EMBV3_03370 GGAGGAGGGCTAAATGATTGGAAACCCAGTGAAGACCCTTGGGAACAACATGCTAAGTGG Gene GeneID:281647|XIAP:XM_002699497:60_cdna Constitutive 0 NULL GeneID:281647 X GENE XIAP BIRC4 X-linked inhibitor of apoptosis EMBV3_06851 AGAAGACCTGCGGATGCAAAAGCTGCACAAAGCCGATAGGGAGGAAGTCGGGTCACAGAT Gene BVV0102_333885 + 0 NULL GK000010.2:45303691-45317824 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020934 1 XLOC_011609 NonCoding TCONS_00020934 XLOC_011609 NonCoding NonCoding - 10:45311550-45312759 - TSS14824 1209 1 TCONS_00020934_2 64 0.376344086021505 1 0 0.00025883557319673 0.000157915818287884 0.000474563550081165 0.000631911612519893 0.000485958275142906 8.87607419348716e-06 4.34122769140491e-05 0.000371809660373063 9.13663533735161e-05 1.0209638031763e-05 0 0 1.42396270376332e-05 0 8.11614179437599e-06 0 0 0 0.000803690158588933 0.000529393941144275 3.76641706151251e-05 0 0 0 0.000922651269646916 0.000425409238368066 0.000397394672141828 0 0 0 NM_001046331.2 SNX6 Bos taurus sorting nexin 6 (SNX6), mRNA. 8e-16 89.7 76.19 0.10339123242349 XM_005254421.1 DUOX2 PREDICTED: Homo sapiens dual oxidase 2 (DUOX2), transcript variant 2e-18 98.7 76.92 0.104218362282878 0 noncoding 0 0 0 0 0.0892550977179251 0.463433126799107 0.0269564388504328 0.600862708247282 AGGAAGAATCAGAATCACCTGTACCGGAGGTTCAATAAAATGAGTGTCAGCTGCCCCAAAGAAGCAGCAGTGCGAGGTGAACTCGTGCTCCGTAAGCTGGAAGACCACGAAACACCCTTTCAAGCTCCTCTGCAAGACTGTGTAAGCCTAGGACTGTAAAGGTGGAGAGAGCACGGCGAGAAAGGATCATAAAGGGGAAGGGCTGGCTCTTTTATATACCAAAAGAGAAAACGCCTAACAGTGCAATTAGTAAACCACCCCGTTCTGTGTTGATGTCATTATTTGTGAGTCAGAGACTGGACTGAGACCGCCAAGTGGGAGAAAGCAGATAAGATGAACAGAGAGAGTGCTGGAGAAGGAAATGTCATAATGAAGAAAATCCATTCCTCCAGACAGCTTGCGTTAAAACCAGGCTTTGGGTTAGGCGAGGAGACCAGGGAGCAATGTTGCGCTTCACTTGGAACTGACCCCGCGGCGGCAGCAGTGAGCAGAAGACCTGCGGATGCAAAAGCTGCACAAAGCCGATAGGGAGGAAGTCGGGTCACAGATGTGAGCAATTCCTCTGCCTCCGCCTCCCTCCTTCATCAGCCAATCAAGATCCAGCTGAAGACCCGTGGCGCTGGGGCGGGGAGGAGGGCGGAGCCTGAGGACCGTTAATCCGTCGCCAAGCGGTGTCCAGCTTTCCTCTGTCCAAGGACTCACTGTTAACCTGGTGGGCAGACAACCACTTTGGGAAAAGCTCTTGCAGTTTCATATAAAACTAAATATAAACTCCAAGACTCAGCAATTTTTCACCTAGGTATTTTTCCAACAGAAAATAAAGCATAAATACCACAAAATCCAGATATCCATCAACAGGAAAATGGATAAACTGTAGTATATCCATAAAATGCAACACAACTCAGCACTAAAAAGGATCAAACTACTGATACAGTCAGCAACATGGATGAATCTCAAAATCATGATGAGTGAAACGCCAATACACACAAGAATACATATTGTATAATCTGTGCATTTCACTATATGTAAAGTTTGCATTAAAAAGTTAAGCATAAACTCTAGCTAATTCTATGCATGTTGAAGTGTTTAGATGTGAAATATACTGTTGTCTGCAACTTTGAACTGCATCACAAAAGATGGATTGATGAATGTGGGGATGGATAGATGTGTTAAATACTTCCCTGATGGCTCAGCCAGTAAGGAATCTGC TCONS_00013723 . 5' 3068 TCONS_00013723 . 5' 3068 EMBV3_10453 GCATCTTGCCCCAAAGGCTCAGCTGTTAAGGTATTAGGGATGTCCTTTGCACTGACCTTG Variant GeneID:505040|CD53:NM_001034232:53_cdna 604^687 1 EMBV3_08580 GeneID:505040 3 GENE CD53 MGC137765 CD53 molecule EMBV3_37518 CATGGTAAGGAGAGAAGTGGACAGAGCTATTTGAACCTGTGGTCTCAGGAGCTGGGGTGA Gene GeneID:539392|PDCD1LG2:XM_002689602:5_cdna Constitutive 0 NULL GeneID:539392 8 GENE PDCD1LG2 NULL programmed cell death 1 ligand 2 EMBV3_23575 ACAACGTGGTCGTCTTCGGAAAGGTCATCACCAACCAGGAGAACGTGTACCAGAACAACA Gene GeneID:534961|C1QA:NM_001014945:230_cdna Constitutive 0 NULL GeneID:534961 2 GENE C1QA MGC127620 complement component 1, q subcomponent, A chain EMBV3_11656 TGCTGCCAGAGCCTGCCCTTTTCTCTCGTTTTGCTGCTGCACACACCTGCTTCTGTAATT Gene BVT0102_248546 + 0 NULL GK000012.2:19147325-19150793 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034726 TCONS_00034713 TCONS_00034727 TCONS_00034714 TCONS_00034715 TCONS_00034718 TCONS_00034710 TCONS_00034729 TCONS_00034723 TCONS_00034711 TCONS_00034716 TCONS_00034720 TCONS_00034717 TCONS_00034722 TCONS_00034712 TCONS_00034725 TCONS_00034728 TCONS_00034719 1 XLOC_020739 Coding TCONS_00034729 XLOC_020739 Coding Coding SETDB2 12:19123955-19150450 j TSS25593 4960 1 TCONS_00034729_3 589 0.230241935483871 10 0.813165244961123 0.000492805715094675 0.000158507493741366 3.76249459684913e-12 0.000764700165096343 4.7283019106024e-29 0.000207165279143767 1.72770679877948e-21 3.2503393205964e-23 1.98815224302497e-26 0.00140788297899944 0.000875296194576966 4.4670465303811e-05 5.68693741984127e-33 3.59830575614847e-47 9.05806287037694e-38 0.00344315974461272 0.00565110372752329 2.26600630531577e-22 0.00240510751173109 0.00244508607221423 0.00113019581649926 0.00126202473041433 0.000721220298719421 0.00190797585161076 0.000734714837915539 0.0008266321084706 0.00140275804060403 0.000617856251561131 0.00045805806557795 0.00087881107233345 XM_005213599.1 SETDB2 PREDICTED: Bos taurus SET domain, bifurcated 2 (SETDB2), transcript 0.0 8902 100.00 0.994959677419355 XM_005266568.1 SETDB2 PREDICTED: Homo sapiens SET domain, bifurcated 2 (SETDB2), 0.0 2612 82.13 0.525 TCONS_00034729_3 sp|Q96T68|SETB2_HUMAN SETB2_HUMAN Histone-lysine N-methyltransferase SETDB2; 0.0 991 79.19 0.99830220713073 3 coding 0 0 0 0 -0.0135233657687976 0.903395191167013 0.0227458327997376 0.796316873098467 GAAAGTTTCAGGTGGACGGCAAAGATCTACAGAAAACCAGGAAATTCCCCCTATGGAAAATAAAGTTGCAGACTTTAGAGAAAAAGAATCTTCTTTAAATTTATCTTACCAAAAGCATCAGTGCTCTGGCTCCTGTCTGATGAAAATGCCATTTACCTTCAAGGGGGAAAACCCTCTGCAGCTACCAATCAAATGCCATTTCCAAAGACGACACGCGAAGACAAACTCTCATTCTTCAGCACTCCACGTGAGTTATAAAACCCCTTGTGGAAGGAGTCTGCGAAACATGGAGGAAGTTTTTCGTTACCTGCTTGAGACAGAGTGTAACTTTCTATTTACAGATAACTTTTCTTTCAATACCTATGCTCAGTTGACTCGGAATTACCCAAAGGAAGAAGAAATTGTTTCTGATGTGGATATTAGCAATGGCGTGGAATCGGTGCCCATTTCTTTCTGTAATGAAATTGACAATAGAAAACTTCCACAGTTTAAGTACAGAAAGACTATGTGGCCACGAGCATATTATCTAAACAGCTTTTCCAACATGTTTACTGATTCATGTGACTGTTCTGAGGGCTGCATAGACATAACAAAATGTGCATGTCTTCAACTGACAGCAAGGAATGCCAAGACTTGCCCCTTGTCAAATAATAAAATAACCACTGGATATAAATATAAAAGACTAGAGAGACAGATACCTACTGGCATTTATGAATGCAGCCTATTATGCAAGTGTGATCGACGAATATGTCAAAACCGAGTTGTCCAGCATGGACCTCAAGTGAGGCTACAAGTGTTCAAAACTGAGAAGAAGGGATGGGGAGTGCGCTGTCTAGATGACATTGACAGAGGGACGTTTGTTTGCATTTATTCAGGAAGATTACTAAGCAGATCTGACACTGAGAAACCTGATGCTATTGATGAAAATGGAAAAGAAGAGAATATTATGAAAAATATGTTTTCCAGAAAGAGGAAAATAGAAGTTGCAGATTGTGAGGTTGAAGTTATCCCAATAGAACTGGAAGCACGTCCTAGAAGTATGGAGACTCAGGAGTATCCACCTAAGCTCCATAATAATACCAAAGAGCCTATTACAGGAATGAAATATAACAGCATTTCAAGAATTCGATATCATTCTGTCATAAGAAGTCCTAAAACCAAGACCGTCATTATTCAACACAATGGGAAAAATATGGGATTTACTTCCTCAGAGTCTGTCACCTCAGAAGATAATGGGGAACTTAATCCAGCTCAAGTACATCTGAACTCTAAAGCCAAGGAAATGAGAAAGGACTCAAGCTCAAACCAAGTTGAAGATTGTAAAGACAGCCCTGTGATTGATTCCGATGTGATAGATATAACCAAGTGTAGAGAAGACACTCCGCCAGGGGACACATGTCACCAAGCAGTCACACTGGATAACAAGAATGAGGTTCAAATACAAAAGCCCCAAGAGGAAAAATCTCCAGCATGTCAAAACCATCAGGTCTTTTGTGGTAAAGAGTTACCGAATGAAACCAAGGATGCTTCATCTGATTCTCTAGAGAAGTTCAATAAAGGGAATGTGTTTCTATTGGATGCCACAAAAGAAGGAAATGTGGGCCGCTTCCTTAATCATAGTTGTTGCCCAAATCTTTTGGTACAGAATGTTTTTGTAGAAACACATGACAGAAATTTTCCCTTGGTGGCGTTCTTCACCAACAGGTATGTGAAAGCAAGAACAGAACTAACATGGGATTATGGTTATGAAGCTGGGACTATGCCTGAGAAAGAAATCCTCTGCCAATGTGGGGTTAATAAATGCAGAAGAAAAATATTATAAATCTGTAGTTAATACCTGCTCATGAAATCAGCTGATCAAGCTGAACCTAGGGCCATGCAAAAGAACCCCCTGTGGTCAGTGGAATTAATTTACATTACGATCTGTCAAGAGAATTCCTCTCAGTTTACCCTTATTGGGAGAGTTTATTTTCATTACTTAGAAATGCTTGGAACAAAATAGGGACATTTTCATACGCATAGTCTATCTCTTTATTCTTACTGCTCTTCAACTATACATGAGTAGAATGGATGTATATATTTTATATGAAATACCACTATATAATTTGTAACTTATTTGTAAATTATGTATTCAAAAGAACAAATGTCATAGTTAATTTCAGCACTTCTTACTGCTTTTGTAATTATTATCTTTGACTTTCAGGGCCCCACAGGGCCAAATTTCACCTCTTTACCTGCAAAATTTATGTTTAATTCCTGGCAAATAATTTACCATTGTGAGCCATAAGCTGGGCATCAGAGCCTGAAGAATATTAATATTATGCAAATTACTTCCAAGTATTTTAAATTAATTGGATAAGCTCCATGAAATAATGTCCCGTCAGTCCACTTGAGTGAGAAAGAAGAGAAAACTCTCCTAGGGGAAAGTTTTGGCACATTTTTTGAAATGAAACCTCTTTTCCACAGATTCTCTTCACTCCTTCTATACAAACACAGGAAAAGAGGGAATACAAACTTGGAGGAGCTGAAATATTTTTGTTCTAAACAGAGTAGAACCGTAAGAAAAGGAAACTTGAGAGAATAGTCAGATGTGGCTTATTTATTGCCAGAAGAGATGGTGCTGGGTAAGAATTGTTGTAAACAATTCTGTTGAAAAAGTCTGAAACAGACCGTTGGAGTTTCCTGGGCATAATGTGCAAATTATTTTCCTAGAGAAAAAGGGAAAGATTTACTCTGCTGTAGGTTTCCTGACCATGATCATCTAGTGAAAAGGGGGTGAGAGCCTCCAAGAGTTAAAACTAACTTTATCTATAACAAAGATGTACATTTGGCTGTCAGGAAGTTCTCCCCACCCTTGGAACCAGCATAGGAATACTAGCTCAAAAAGGAGTAATTGAAGTAGTTCTGGGTTTTTTAGGGTTTGTTTTTTTCTTTTTTCTCAGCTTGCTTCTGGGTTTAATTACCTTTGGTTACCTTTCAGACAATGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGATAGAGGAGCCTGGTGGGCTGCCATCTGTGGGGTTGCACAGAGTCGGACACGACTGATGTGACTTAGCAGCAGCAGCACCTTTCAAACAAGAATCTAAGTTTGTACCAGATTTAATTTCTTAAAAATATTGAAATAAATAAAAATTTAACTTGAAGGTAGTTTAGAGAGTGGAAAACCAAAGAGCTAGGAAAGTGAGCAAGAAATTGTAACCCGACAGCCATAGACAAATGGGGAAAGCTGAGAAGTTAATTTAGTCACAGTAAAGATACACGAATTTTAGGCAACGCACTGAAATGAAATGACACTTGAAAAGTATGGGAGATTTGTACAGAGATCTGACATCTTGATCTCCTTCATCTGTACTGGTTCCCAGTTGTCATCTCCCGTCAGCATCCTAGAGATTCCCTTTGTCTTTCCAACGTCAGGTCTATTTCTAGTTAAATCCCCTTATTTCTCCTTTCATTAATTTACTGCCACATATGGGCATGGGGTCACAAAGAGTTGGACACAACTGAATGACTCTCACTTTATGGGTGAAGCACATCGTCCAATACCTTTTGAAAGGGAAAAAATGAGACTATATGTTTCAACATGTTCTTTTGCCCTTACACTTGATTGCTGTTTTGGCAGGGCAGAGAGTTCGTGAGTAGCTTTCATACCCAATTTTGAACATACCTACTACATTCCAGTGTTGCTGCTTTGAAATCTGAAAATGTTCTCACCTCTGGCCTTCAGAGTGACTGTTGGAAGTCAGAGGCCATTCTTTCTCTCTTATATTTGTGACCAGTCTTTCTCTCGAACCTTACAGCAATCTCTCTGACCCAGCGTTCTGTTCCCAGTAAAGGTCTATTATTATACCTGATACTAGGTGCTTGGTGGGATCTTTCAATCTGAAAACTTTGTTCTTAGGGTCCTTTTTTTGAAGTGTTTCTTTAATGACAACTTATCTGTTCTCTCTTTCTAGAATTCCTGTTACCCAGACAGTAGACCTCCAGGATTGGTTCTCTGATTTTCTTACCTTCTCTGTTAATTTCCAGCTTTGTCTTCTTGCTCTACTTTCTGGGAGATTTCCTCAACGTAATCTTCCAATTTGTCTATTGTGGTGGGTTTTTTGGTTTCTTAGTTTATTTGAAGGGGGGGGGGGTCTCATTTTTTTATTTCTAGAGCTCTCTGAACATTTTGTTTTTCAATAGTATCCTATTTTTGGTTCATGGTTGCAGTATCTTATCTCTTGGAAAATACTATTTATATAGTACATCACACACAGGCATTCATGCCTATATTTTCTTCCTGAATATTCTGTGACCTGCAAGGTTTCTGTTTTTCTGTTTCCTTTGGTCTTTGTCTTTCAGGTTTTAGGCTCTCCTTAGTGATCTTGGCAGTCTGCTCCTCCTCAAGAGTGGAACACTGAAAAGCTGAGATTATGATCTGAGAATGGGGGAAGGGGCCCTTCACCTGCTTCACTTGGCCCAGCTGAGCTATTCAATCTCTTTTTCAGTCTCTTTAGGACTTTTTGGCCTGGCAATGAGTCAGTCTTACCGCTTGAAGGCAAAGCACTGCTGCCAGAGCCTGCCCTTTTCTCTCGTTTTGCTGCTGCACACACCTGCTTCTGTAATTCATGTGTGTTGGTCAAGACTAAGTTATCCTTTTTAACACTTTCTCTTTTCTATCCCCAATTTGCCTCCTTTCCTCTCTTCAAAACCTGCTCAAAAAAACAAGACTTCAAGAAGTTTTTCCTTTGATTGCCTCAGCAAACCACCAGCTATTACATGTTTCTTTTTTACAGAGCAACTTATTTTGTAACTGCGATTTAATTACCCGCGTCTATGTTCTTTTGTGTATTTGTTCCATGCGCCAGAAACCTCATCTTGTATGGTGCTGTGTACATTATGGGTGCTAAATAAAGGCTTACCACTGGAAAC EMBV3_06809 GGCGCAGGGCGGGGGATGCCAGCGTGCCAGGAGCCATGTGTGACCGAGACTGCGAGATAG Variant GeneID:507361|GFOD2:NM_001014863:132_cdna 137^301 1 EMBV3_09049 GeneID:507361 18 GENE GFOD2 MGC11335 glucose-fructose oxidoreductase domain containing 2 EMBV3_23222 ACCTGCTCAGTGTACAGTAGGATATGCAGAGGGTAAAAGAGGATTCACGCTCTGGGACTG Gene GeneID:516353|BAG4:NM_001110532:73_cdna Constitutive 0 NULL GeneID:516353 27 GENE BAG4 NULL BCL2-associated athanogene 4 EMBV3_20331 TCTGGACTTGCGGGCTCCGAGTGAACACGTGTCAATGTTAGGTGTGCGTTCCCTGTAAAT Gene GeneID:100295009|LOC100295009:XM_002691993:93_cdna Constitutive 0 NULL GeneID:100295009 12 GENE LOC100295009 NULL similar to PAK-interacting exchange factor beta EMBV3_22720 GTTCAGGATGCTTTGCTAAAATCCACCAGAAGGGGGCACTAAAACTCCACAGAACAACTC Gene GeneID:617991|LOC617991:NM_001079633:164_cdna Constitutive 0 NULL GeneID:617991 1 GENE LOC617991 NULL hypothetical protein LOC617991 EMBV3_31232 CCAACGTGGTGTTCCTTGAAGTAGATGTGGATGACTGTCAGGATGTTGCTGCAGAGTGTG Gene GeneID:280950|TXN:NM_173968:4_cdna Constitutive 0 NULL GeneID:280950 8 GENE TXN MGC151960 thioredoxin EMBV3_03787 CTTCTCAAGTCTACAGATGGCAGCCCTTCCTCATCCCCAGCAAGAGAGAACTGCCCAGCA Gene GeneID:512133|TM7SF4:XM_002692757:98_cdna Constitutive 0 NULL GeneID:512133 14 GENE TM7SF4 NULL transmembrane 7 superfamily member 4 EMBV3_19592 CTTCTTCCCTGTGGTATGTTTCACTGTTACAGCCCTGGATGACTCTGCAATCTGGTTCAG Gene BVT0101_024160 - 1 EMBV3_27177 GK000001.2:128221734-128268870 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005166 1 XLOC_001196 NonCoding TCONS_00005166 XLOC_001196 NonCoding NonCoding - 1:128261152-128264221 - TSS2552 433 1 TCONS_00005166_1 60 0.66743648960739 3 0.859843546284224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.26614439957003e-05 0 5.47748583975559e-06 0 0 3.32167870105544e-05 0 0.000257067668924814 0 0 0 0 6.76575969624455e-05 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 4e-52 208 76.68 0.644341801385681 0 noncoding AGAGACCTTCTGGGAGGCTGTTGTCACTCAGATGAGCAGTGGTGGTGAGAGCCAGACAGAGAGGAAGTTCACCTCTGAACCAGATTGCAGAGTCATCCAGGGCTGTAACAGTGAAACATACCTCAGGGAAGAAGAGAAAAAAAGGACTTCCCTGGCAGCTCACAGGGGTAAAGAATCCACCTGCCGATACAGGAGACATGGGTTCAATCCCTGATCCGGGAAGATCCCATATTCGGAGAAAGAACTAAACCTGTGCACCACAGCTACTGAGCCTGTGCTTTGGAACCCGGGAACCACAACTGAAGCCCTCGCGTTCTATGGCCCATGCTCAGCGACAAGAGAAGCTCCGGCAATGAGAAGCCCACGCGCTGAAACTAGGGAGTAGCCCCCGCTCACCACAACTAGAGAAAAGTCCATACAGCAGGGATGAAGA TCONS_00005167 s 3' 7430 TCONS_00005167 s 3' 4650 EMBV3_00106 GGAGTGGAGTGAAGGGTGTGTTCTGCGCAGCTTCCTCGGCTGTCATGGGACTGATCGAGA Variant GeneID:513795|ECHDC2:NM_001038536:52_cdna 310^489 3 EMBV3_03710 GeneID:513795 3 GENE ECHDC2 MGC134069 enoyl Coenzyme A hydratase domain containing 2 EMBV3_14134 CACGGGCATCGTCATCGGCATCCACATTGGGGTCACCTGCATCATCTTCTGTGTCCTCTT Gene GeneID:529830|IGDCC3:XM_002690522:536_cdna Constitutive 0 NULL GeneID:529830 10 GENE IGDCC3 PUNC immunoglobulin superfamily, DCC subclass, member 3 EMBV3_37226 CTGTGTGAATAGCTCAGTCCTGAAATTTGACTGTTTCCCTGAGAAGTGCAACCGCCGAGG Gene GeneID:531521|LOC531521:XM_002686116:138_cdna Constitutive 0 NULL GeneID:531521 3 GENE LOC531521 NULL similar to ADAM metallopeptidase domain 30 preproprotein EMBV3_03846 GAAGGTCACGTACCTCCACGTCCAACAATTCCTGGTTGGGAGCCAAGATCTCAACCTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15617 GGACGGAAGAAGGCCGGGAGCCCCAGCCCGAGCACCGCCCTTGCGGAGAGCAGCAGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41721 AGAGTCAGGTGGTAGACCTGTTAGTGAAGGCTGGAACAATGGTTGCTTGTGTCATGGGAC Gene BVV0102_302493 + 0 NULL GK000006.2:48482961-49812542 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25168 CTGGATCGATGGAAGCACAGCAGCATTTAGGTGAAGAGATAGAGCCAGCAACACCCATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42259 CCTCGAAAACCACAACAAACTCTGCTAAACCAGATAACCGGATCGGGAACAGTCGTGTGT Gene BVT0102_121797 - 1 EMBV3_22863 GK000011.2:88587165-88739564 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033602 1 XLOC_019835 NonCoding TCONS_00033602 XLOC_019835 NonCoding NonCoding - 11:88590484-88591189 - TSS24601 705 1 TCONS_00033602_1 70 1 0 0.000135092108728133 0 0 0 0 4.0590708640415e-05 0 0 0 0 0 0.000177516288669684 0 0 0 0 0 0 5.08575916014496e-05 0 0 0 0 0.000856067802426022 0 0 0 0 0 0 XR_227111.1 LOC101905845 PREDICTED: Bos taurus uncharacterized LOC101905845 (LOC101905845), 0.0 1272 100.00 0.998581560283688 XR_249082.1 LOC101929606 PREDICTED: Homo sapiens uncharacterized LOC101929606 (LOC101929606), misc_RNA. 6e-34 149 74.15 0.327659574468085 0 noncoding 0 0 0 0 -0.00499624983967184 0.974999708419361 3.25646264674809e-05 0.99943168703069 GAGGCTGGAGGATGGGCAGCCGGTTCCCGCGGCTCCCAGTCTCTGCGCGCGGCCGACCCGTGTCTGCGTCCTCATTACCACTACAAAGCCGGGCAGACGTCGCCTCTTTCCAGAGCTGCGCTTTCAGCTGCGAACATCAAGAGGCCAGAAAACATCCAAGTGGGCCCGAGGACGCAGACGCCGCCTCGGTCCTGGCTTTATCTCTAGGGAAAGTTCCATTTTAAGAACCAGATGCCAACATTCCCGGACAGTTTATGGTATCCGGATCCCTCGGGGTGCGCATCCGCGGCTTAGAGTGTTAGCAGCAATTATTTATCGTCTGCCCTGGAGAGGAGGTCCTGAACACGACTGTCCTCGGCGGACCCTGGGGGTGGGGGTGGGGTGGGGACACACGACTGTTCCCGATCCGGTTATCTGGTTTAGCAGAGTTTGTTGTGGTTTTCGAGGAAACAGCATCTGGGTTACATAAGGATTCAAGTTTTTGCTTTGCTTGTTTATTTAATACCTTGGCAAGAGGGAGCCCTCACTCTGAAACTAGATAACCGAATTTGGGTTTAAAACAGCCTTAGATGAGGGGCAACGAGAGGGGAAGAAAATGAATCAAACCACGAAAAGCAAACAAGGGGATGTTTATTTTTCTCCCTTTGGGTAGTTTTGAAGACCTGCCTAACCTCTTACTTCTCGTCGCGCACAGCTAATAAATCG TCONS_00028730 . 5' 3321 TCONS_00028730 . 5' 3321 EMBV3_16832 TGACCTGGGAATTATGTTCAGTGGATCTCGAAGGGCCGAGTCCTGCCAGCTTGGTTACTT Gene GeneID:100337197|LOC100337197:XM_002698484:548_cdna Constitutive 0 NULL GeneID:100337197 26 GENE LOC100337197 NULL lysyl oxidase homolog 4-like EMBV3_09447 TCTCCTGTCTGGTGGTTCTCTTCATTGTGGATCCCTACCACTCGGTCAGGGTGGCGGAGT Variant GeneID:511001|CLEC4F:XM_002691231:83_cdna 243^338 1 EMBV3_01824 GeneID:511001 11 GENE CLEC4F NULL C-type lectin domain family 4, member F EMBV3_31568 CACGCTTTCCGTCATTCACAGTCTCGAGTTCTCATCCATGTCTCCACCACTCATCGCTGT Gene GeneID:282412|CACNA1H:XM_002697974:715_cdna Constitutive 0 NULL GeneID:282412 25 GENE CACNA1H NULL calcium channel, voltage-dependent, T type, alpha 1H subunit EMBV3_21548 GCCACACTTTTTCAGTCAGTATGATTGCTTGTTCTACTGTACCATGTACGACTCTTGTCC Gene GeneID:513587|LOC513587:XM_002696253:19_cdna UTR3_Alt 2 NULL GeneID:513587 20 GENE LOC513587 NULL similar to UPF0474 protein C5orf41 EMBV3_40425 TATACACCCAAGGAATTGAGGACATATGTTCACACAAAAACGTACACAAATATGCCCAGC Gene BVT0102_357256 + 1 EMBV3_23019 GK000002.2:91180863-91203325 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105827 TCONS_00105828 TCONS_00105826 1 XLOC_062652 Coding TCONS_00105826 XLOC_062652 Coding Coding SUMO1 2:91154086-91182735 = TSS77995 4190 1 TCONS_00105826_3 208 0.296658711217184 5 0.853916503769897 1.6955384971107e-05 0.000105623448913138 0.000112665076117194 1.14501505593692e-24 1.80710890780825e-16 7.72044786877295e-05 8.08616900019291e-05 2.55081164001666e-05 0.00012187319317643 9.77188333692592e-06 1.65291949200367e-05 6.81190862491569e-99 2.21350589595554e-05 8.60059806508779e-05 1.0631776829488e-05 0.00011950573249716 6.76933978498787e-05 0.000349428034271326 0.00014121573838001 4.83245595245679e-05 2.52377813328748e-05 2.68730197442809e-116 1.96709891765564e-05 3.05190623589522e-05 0.000160716956247776 9.91552265506783e-06 0.000104675708593241 3.89072482393116e-19 1.44433734655583e-18 3.99858533350962e-11 XM_005202669.1 LOC614993 PREDICTED: Bos taurus uncharacterized LOC614993 (LOC614993), 0.0 2268 100.00 0.299761336515513 NM_003352.4 SUMO1 Homo sapiens small ubiquitin-like modifier 1 (SUMO1), transcript 0.0 2053 89.94 0.363961813842482 TCONS_00105826_3 sp|Q5E9D1|SUMO1_BOVIN SUMO1_BOVIN Small ubiquitin-related modifier 1; 9e-70 212 100.00 0.480769230769231 2 coding 0 0 0 0 -1.737152409724 0.0422116708952499 0.0532189326223057 0.304733641301381 CAGCCAGGGATCAAACCCATGTCCCCTGCATTGGAAGGCCAATTCTTAGCCACTGGACCACCAGGGAAGTCCCTCATCACTCAATTTTAAAGCACTTTGATCACCCCCTGCAAAAAAACTTTGCCCTTTAATAGTCACTCCCATTTCCCCTCAATTCTGCAGCCCTAGTAGAATTCACTGAAGCAGTAGCCTGCTAATCTATTTTCTGTATCTATAGACTTACCTATTCTGGATACATCATATAAACAATCATACTTTGCAACTGGCTTCTTTCACTTAGCATAATGTTTTCAAGTTTCATCCACCTTGTATGAGCTCTTCATTCCTTCCCTTTTGTGCCTAATAACTTTTCTTTGTATGGCTATACCACTTTTGGTTATCCATTAGTCAGCTGATGCACATTTGGGTTGTTTTTCTTTTGCTGCTATGAATATGGCTGCTGGGCATATTTGTGTACGTTTTTGTGTGAACATATGTCCTCAATTCCTTGGGTGTATATCTATTAGAATTACTGGGTCATGGTAATTTTATACCTAATAGTTTGAAGAAGGCAGGAATGTTTTTCAAATGAAGTGTTTTCCAAAGCATTTTATGCTCCCATTAAATACAACAGTTCCAATTTCTTCAGAACTTATTTTTTTTTCGGTTATAGACATATATCCTAAAGGATCTGAAACGTTATCTCATTGTGGTTTTAATTTGCATTTCCATGATGGCAAATGATGTTGAGCATCTTTTCGTGTCCATTCGTATATCTTCTTTACAGAAATTTCTATTCAGATGGTTTGTCCATTTTTAAATTAGATTGTCTTTTAATTGTTGAATTATAATAGTTCTTTATGTATTCTAAATATTAGACCTTTATGAGATATATTATTTGCAAACATTTTCTCCTATTCCTTAGATTGTCTTGATGAGGTCCATATTATTTATTTTTCTTTGGTTGCTTGTGCCTGATCCAAAGTCAAGAAGATTTATACTTAATGTTTTCTCCAGAGTATTTTAAGGTTTCAGCTCTTACATTTAGGCCTTTGATTCATTTTAACTTTTCAAATGTTATGAGTTAGTAATCCAGATTCATTCTTTTATATATGGATATCCAGTTGTCCAAGTAACTTCTCTTTTAGTCTGTTCATTTATTCTGGAATCTGAATTCAATTCCGCTTATCCGTATCCTTATGCTCTATGCTTTTGCCAGTAGGGCCACTAATTTTGTTTTGTTTTGTTTTTTAGAACGAACTCATGGAAAGACCATTCATTAACTCAAAATAACCAAGTCAAGGGTGGGAATCAGCTTCTTCGCACTACCAGTTTAGGAGCTAAAGATGCTCCTAAAGTTTCAGGAGCATCTTTTTCATCAGCAGCCATCAAAATCCCACCCAATGCGATTACGTTTTGTTTTGTTTGTTTTAAATTAATGTCATTGTGTTTGGCCAGGGTTGGTTAACCGAAAATGTTACCTCCAGGCTAAGAATCACTGGTATTCAGTCCAGTTTATTTAGGGAGGTAGATGAGCAAGGCCAGAAGTAGACAATAGAAGTACTTTGGCTCAGCCTTCAGAAACGCGCAAGGTGTCGGCGGGAGGAGGCTGGCCTGTCAGTACGGTTCTAAACAGAGACTGGGCACCGGAAACTTTTCCTCAGGGGATGGACTCGGGCCCGAAGCACAAGGCCTATCTCGGTGCTGCGGTGATTAATTCATCTGTGCGACCACAACTAAAGCCCGCTCTCAATCCTCCAGCCTCCGGGGAGCCCCGCCGCCCCCAACGAGTTTTCCCGCGTCGCCTTTCCTCTTTCCCCTCTCCGTCCTCACTGAGCGTAGCGGAAGTGACGCAAGGCGTAGCGGAAGTCCCTCCAGCCGCGGTGTTGTGCTGTTGGGTAGAGAGACGGATTTGTAAACCCCGGAGCGAGGTTCTACCTACCCGAGGCCGCTGGTGTGCGGAGACCCCGGGGGAAACTACCGTCACCATGTCTGACCAGGAAGCAAAACCTTCAACCGAGGACTTGGGGGATAAGAAGGAAGGAGAGTATATTAAACTCAAAGTCATTGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAAGACAGGGAGTTCCCATGAATTCACTCAGGTTTCTCTTTGAAGGTCAGAGAATTGCTGATAATCACACTCCAAAAGAACTGGGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACAGGGGGTCATTCAACGGTTTAGATATTCTTTTTATTTTTTTTTCTTTCCCCTTAATCCTTTTTTATTTTTAAAAATAGTTCTTTTGTAATGTGGTGTTCAAAACATAATTGAAACTGGCACCCCATCTCTTTAAAACATCTGGTAATTTGAATTCTAGTGCCCATTATTCATTATTGTTTCTTTTCATTGTGCTGATTTTTGGTGATCAAACCTCAGCCCCCTTCATATCACTCTCTCCTTTTTAAAAATTACATGTGTGCATAGAGAGCCCGCCTTTTCCAGGACTGTGCATTTGCAGGCTTGTGATAAATAAGATCAACTAATCCAAGTGTTCCTAATGACTTTCCAATTGGCCCTGACGTTCTAGCATGTGATTGCTTCACTCCTGGACTATGACTTTCAGTGGGAGATGGAAGTTTTTCGGAAAACAGAACTGTGGAAAAATGACCTTTCCTTAACTTGAAGCTACTTTTAAAATCTGAGGGTCTGGACCAAAAGAAGAGGAATATCCATTTGGAGTCAAAATGACAGAGAATAATGACTAACTCCAAAGATGGCTTCACTGAAGAGAAAGCATTTTAAGATGAAAGAAAAATCTTGTCAGAAGATCCCAGAAAAGATCTAATTTTCATTAGCAGTTAAAGTTATTCATGCAGAAGTGTATACAACAGAACACTGCTCTTTTTGACTTTATTTGTACTTTTTGGCCTGGGATATGGGTTTTAAATGGACAGTGTCTGTACCAGCTTCATTAAAATAAACAAAATATTTGTAAAAACTGTACCCATGTTTATTTTATTTTTAATTGTACAGAAAGAAAAAAAGAAAATGCTTAAAACATAAGGTTTTTTTGCATCATACTGGAAATTATTGTTCATACATGGTACAGATTTTTTTACGGATTATGTGGTGATGATCATGACTTTGAAGCACTGAAAGTTACTGAAGTGCCTTCAGAATTAAGGATTTAATTAAGGTCACAATACCTTCTTAAATACTCACTGTTGTTTTTTAAAAAAATTTGATATTCCTGTATGGTGCATTTATATGATACAGTTACCCAATATGTTGAATAAATGGGCATGCCAGAAATTCTTAATTGATATTGATAATTTCAGTTTTTCCCTTAACAATTTTCAAAATGTTCTCTGTAGTTAAGGTTGTTTATATTTTATTTCTTTATATCATCTTTTCAACTGTAAAATTAAAATACTAAATTAGTTCCTCAATTAGAGGGCTTAACTTTTTCTTTTAACTCCTTAATGAATCACAGAATTCAGAATATATATGCACATATGTAATCCAATTTTGTATTATTCCAAGTAGAATGTCATCTAGCTACTTGAGAAGAGCAAATAAAACCTATCTCTAATGCAAACTATTATAGTTTGAATACCCTCTCAAATTTCCTGTTGAAAAATAATTGGCTTGTCTTATAAATCTTATTTTGACCATACCTGAAAAATTATTTGTATCGTACATATATAGTCTAGGTAAATTAGAACTTTTAGACCATTGTGTTAAATAGTACATAGAAATAAGGCCCATTTCCAGAAAGTCCTCATTGAGTTGCATATTTCTGTCAGGCCTGAGAAAACTGATAGGCTATTTGAGCTATCCAGAATGCGCATATATGTAGTTTGGTATCAGCTTTGTTTGCATGTCTGAAGACTTGGCATTTAGGTAGTGGAGCTTAGCTATGGGGGATACTTGATTTTAGTTTATTGGATTCTTCTAAATGCTGTGCATTCTGCTATGGTTAACTGAAAAATGTGCTTATCTGGTTAGTAGTGCTGATAAAATAGGCCTTTAACAGCAACAGTTTAATAGAATATCGATAAGATTTGGAAGGCACCTCGAATAACATTTTAGTGTAGCCACTCTACCTGGTGCTTGACTGCAACTTTTGAAATTTGTAAAAGAAGAGAGAAAATAAAA EMBV3_15285 CTGTTTGTGACAGGAGTTTAAATGTGTCGTCCCCGTGTTCACTGTGTCCCTACTCTGTCC Gene GeneID:614694|NUPL1:NM_001098129:64_cdna UTR3_Alt 2 NULL GeneID:614694 12 GENE NUPL1 NULL nucleoporin like 1 EMBV3_02854 AAGGTGGGCTTTAAAGGAGAGATGGACTACAGATGCCATGTGTTTCTAAGAGGAAGTTTG Gene GeneID:615330|YEATS4:NM_001076365:46_cdna Constitutive 0 NULL GeneID:615330 5 GENE YEATS4 MGC133571 YEATS domain containing 4 EMBV3_27881 CAAGAATGATGGCCTGCGCCCTGCCTTCTGTCTGCCAGACCTTTACTTACGGCGGATGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29095 CCTTGGCAGGCTGCCCGTGCAAGTCCACAGGAAATGGAACCAGAGCACAGTCCAGCCTCT Variant GeneID:614757|C7H5orf45:NM_001167943:43_cdna 339^496 3 EMBV3_04920 GeneID:614757 7 GENE C7H5orf45 NULL chromosome 5 open reading frame 45 homolog EMBV3_00971 GTCTCAGCCTCTCGCAAAGGCGCAAGATTCTGTTGGAGGAAGAGTGAGAACATCCTCTGT Gene GeneID:535545|SPAG17:XM_002686096:83_cdna Constitutive 0 NULL GeneID:535545 3 GENE SPAG17 MGC148320 PF6 sperm associated antigen 17 EMBV3_33282 CCACAGATATGAGCGAAAGGTCAAGGAGATGACTTACCAGGCAGAGGAGGACCGCAAGAA Gene GeneID:511687|MYH13:XM_002695846:291_cdna Constitutive 0 NULL GeneID:511687 19 GENE MYH13 NULL myosin, heavy chain 13, skeletal muscle EMBV3_16453 TGCGTCAGGCTGACAAGGTGTGGCGGCTGGACCTGGTCATGGTCATCCTCTTCAAGGGCA Gene GeneID:100337236|LOC100337236:XM_002688948:44_cdna Constitutive 0 NULL GeneID:100337236 7 GENE LOC100337236 NULL Nuclear factor 1 C-type-like EMBV3_39650 ACAGATGGATAATGGGACAAGTTATAGAGGGGGAGTGTGTGTGGAAGTGTAGGGATGGGC Gene GeneID:525106|C5H22orf28:NM_001015631:34_cdna UTR3_Alt 2 NULL GeneID:525106 5 GENE C5H22orf28 C22orf28 HSPC117 MGC128918 chromosome 22 open reading frame 28 ortholog EMBV3_31143 CTTTCTTCCCTAGGACCAAAGATTCCAGGACCCGGGATCACCCTCCCTCAGAATCTAGAA Gene GeneID:783181|LOC783181:XM_002691789:407_cdna Constitutive 0 NULL GeneID:783181 12 GENE LOC783181 NULL similar to PIH1 domain containing 1 EMBV3_43716 CAAGACACGCTGGACACAGATATCCACATCGAGACAGAGGACCAGGGCATGTACAAGTAC Gene GeneID:539295|ARFGEF2:XM_002692495:602_cdna UTR3_Alt 2 NULL GeneID:539295 13 GENE ARFGEF2 NULL ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) EMBV3_24156 GAGCAGATCCTCAGCCTTCCAGAGCTCAAGAGACAGCCTGAGCTTTGAGGACTTCTTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13074 ATTCAAGAAGCGGTATTTCTCGCCTACACCCAGGGTTTTAAACAGGCGCCACTATCCTCC Gene BVT0102_034281 - 1 EMBV3_01181 GK000024.2:61447163-61511861 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140773 TCONS_00139543 2 XLOC_085212 XLOC_084924 NonCoding TCONS_00139543 XLOC_084924 NonCoding NonCoding - 24:61448762-61454669 - TSS104342 5390 1 TCONS_00139543_7 153 0.191094619666048 2 0.0877074161869286 0.00108766818116332 0.00105657743092167 0.000984388676659248 0.000946975633473659 0.000437997090859844 0.000153060366655092 0.000586696633915761 4.5519924387788e-05 3.49833775231722e-05 7.02960356076759e-10 1.89694523226939e-05 3.25060179389739e-05 0.000122745485601619 0.000209492800160413 0.000536896247170522 5.87931511850913e-05 0 0 0.000410764258551272 0.000566533639559541 0.000421564991098272 3.02875590984506e-05 1.69936940527847e-06 2.79880497460819e-05 0.000669995173652277 0.000555309302927059 0.000980556495226513 2.96271288587374e-06 9.00667512755887e-07 4.60039724355171e-05 XR_239930.1 LOC101903213 PREDICTED: Bos taurus uncharacterized LOC101903213 (LOC101903213), 0.0 6430 100.00 0.661224489795918 0 noncoding 0 0 1 0 -0.0511899013988333 0.77630062134282 0.0244325880418852 0.684397355006057 TGGGGTGAGGGGGCCTGACACGGGCAACTGTTGTGGGAAACATCCTGAAAGAGTTACAGGATTTGTGGTTCAGTTAGTAAAACAGCCAGACTGCAGAATTGGGAGTTGTTGAAGGAAAAATTGGAAGTTGCCAGGTTTTAAAATAGAGACAAAAAGAAAAAAATGTGTTGACATGGTTTTTTAAACTGTCAGATGGTTGAGAGAAAGCCTGGAAGTTGAGAGATGGGTTAGGGTAAGGGCAGGACAAGAGGGGGATGGCAGAGGCGGATGGAAGGACCCCTGGGCTGCAGAGCTGCGTTTTACCACGTGGATGACAAGCTTAAGTTATGGCTCCGAGGATTAAATAATAATGGGCAGGGTCCAGCACCATGAAATAGCACCAACGAGGCACTCAGATGTCAGCAGAATTCTGTTTCCATGAACAGAACTGTCTGCCTGAAGGCAGTGGTTGGTTGCGGCGGTGAGGAGCTTAGGAAATGTAGTTCTTCCTTATGTTAAGCTTAGTTGTTTGAGCTCTCTCCATTGATAAAAGATAAAATATTCCTTGTCCTCAAAAATTATTTGGGATTTCCCCAGGTGGTCTAGTGGATGACTCTGTGCTCCCAATGGAGGGGCCCAGGTTCGATTCCTGGTCAGATCCCACATGCTATGACTAAGACCCAATGCAACCAAATAAAGTATATATTAAAAATTATTTGGAGGCAACTCTGGGGTATAATATCCATGGGCTAAGTCTTGCAGAACCGAAGTAGAATAAGGTCTTACAAGGCAAATCCACATTGTAGTTTTTTTTAAGTGCTAAATACCTAAACTTTCTGAAGGTTCCCGAAAGATTAAAGCACAATGCCAAATAATCCCTCTCTCTCTCTTTTTTTTTTTTTTTAACAGGGAGCATCTAGTACTCAGGAGCACCACCCATTAGAGCCTGGAAGACACCTGTTTTCAATTCTATGTATTGATTACAAAAGCATTCTAAGGTTAAGGCAGTGAAAGCAAACGGAGGCAAGCTGTGGTAGCAGTTAACCCCATAACACTTCCATCTCTCCTCTCGAAGGAATGAAGAAAAATACTGACACCCCACCTACTGCACCCACAAAAAGGATGCACTTATTTCTGGAGAAATGAATTGAGATCTGGGGGATGGAGGAAGAGAGGGTACTCTTTTAAACATGGTTGCTGCATTTCTGGTCGTTTCTGTGGGGCTGGAGGAAAGTCTGCAGCGGGTCCTGTTTGGCGAATGAAGGGCCCTGGAGTCCAGGCTGAGAGTCCGGTGTCACCGCAGCTCCAACGCAGTCCACTGGAAACGGGCTCACCCGCCTCGAGACCAAGAGATTGCTCGTTGGGCAGCAGCGCCACCTGGTGGGGAGAGGACACCGCCACGAGCGGCCTGACGGGGGCGGAAGGCGCGAGGCATTTGGGGTGGTGACCTGAGCTCAGGGCCTTAAAGCTTGCCGGCGGCTGTCCGCGGAAGCAGTGTGAGCGGCCTCCCCTTTCAGCCTCCGCAGTCTCAGTAGGGCATACACATCTTACACGCACCGATGGTGCTTCACAGTCTCCCGTGCGAAGGGGTGCTTCTCCCTGTCCCCCCACCATTGCTCAGGGGGCTTCAGGGCCACGGGCGGTGAAGGCCCGGCCCCAGGTTCAGAGGAGGCTCCCCCTGCTCGCCCACGGCCCGCAGCGCCTCCCTGCTGAGCCCAAGGCCACGGCCTTTGAAGCCGCATAAAACGGTCGATACCCGTGGTCTTAGGAGCCTGGGGCCTCTGGACTCCCTGCGGGAGCAGAGGGCCGGCTCTGGGCGGCCCGAATGTCTCTTCGCTGCGTCTTTGTTGACGGATTTGAAGACGCGGGGTGAGGGGAGGCGTGCAGAGGTGGACGCCTCAGGACTTCTGGACGAGGCTTTAAGTGTTCTGTCTCCGATGAATTCAAGAAGCGGTATTTCTCGCCTACACCCAGGGTTTTAAACAGGCGCCACTATCCTCCGCTGAAACACCGACTTTTGCTCTGCAGAGGTTTTTATGATCCCCCAGATGTCTCGGTAAATCGAGCATTTAGTGACTCAAGACTTTGGAACTTCGGAAACGCAGCGGCAGGGCGCACAGAAGACACCTGACTGCTGACGCTGGAAAAGCTCTGAGAGTGACGTGTGGATGGTCGCAAGCACTCCCCCTCAGCCCGCGGGGCTCAGACTCCCCGGGCCGAAAACGGCGGCAGCAAAGGCACCTTCAGGCAGACACAGCGGCGGCCACATCCACCGCGGAAGCCCCTCTGGATGCTCTAGGGAGGCCGCCCGCTCACCAGGGGCCTGGGGCTCCTTCGTGCTCGAGTATCGAGGACTGGACTCGGGACATGGTCATCCCGCGTGCCTCGTTCGCCTTCATCAGACGAATTTGTGCAAGAGAGGAGGTCTTATTCCAGCACCACCCCCGATTCACACCACCTTCTCGGGCTCCTCTACGGAGTGGGGATAACGGTCACTTTGTTAGAATAGTTACAAGACTTAACTCCGGTGAAATGAATGAAGAACTCAATATCAGATACACAGCAGGCGCTCTGTAAGTTCGTGAAGGTGGCAAACACCTGAGTGCCCATTGGGGCGGACTGGTCACAGCCACACGACCGCCCCTGGAGGCTGGTGCGCTGCGTCGGCTTACAGCTGGGGCAACTGAGGCACGAAGGCGCCCCACTGAGGGCACAGAGCAGGTCAGCGGCCAGGCTGGGACTGGCCCCCGAGCCGCTCCTCCCCCCCCGCCCAGTTCTCTGTGCTGGGGTCCCAGGACGCTGCAGGCGGGGCGTGGACGTCCAGGGCGCCCCGTGCGGGGCCCAGGCCAGCTCTGCTGTGAGCCCTTCCGTCTGGGACACCTGGCCCTCCTGGACCTTCATCTCTCACCTGAAAGCTGAGTGCTTTCTTGGAAGAAGGTGGTAGACACTGAGCAGAATGACCGCAGAATTCTGACTGGAAGCTTGCCTTTTCTCTTTAAGTGATTTATCAGCTTTCTGTAGTTCTCTTTGATTTCACCGATGTGCGGCCCTTCGGGGGTGTGGCTAGGCGCACGAAGCCCAGCTGCGCCCAAGTGCTGATGGAGGGCACGTGGCACTCGGGAGAGGAGAGGAGGCCCGCGTGGGACCGGCCGGGCACCCGGGGCAGCGCCGAGCAGGCGGTGCTTCCTGTCGTCAGAGTTCTAGGCTCTTGTCTCCTTGAACCAATAAGGTTTTCACCTGGGGGGCCTTCCAGTCAAAGAAGGGAAGCTCACTTCCCGAGTCCTGTGCTGAAGGACACAGGGTCAGCCGTGGTCAGCAACACGACCCACAGCCAACCATGCTTTTACATCTTTCAGTGGTTGAGAAGAATACTTTTATCACGACACACAAAAATCCCCCAGAATTCATGTGTCAGTGTTCACAAAGTTTTTTGGAGTCCAGCCGCTCTCGTTCCTCTCGTGAAGGCTGCTTTCGCCAGGAAGTTGAGGAGTTATGAGAGACACCATATGACTATCAGAGCCCGAGATACTATCTGTGTTTTTATGGAAAAAGCTTGCTGAGCCCAGATGCCTATCAACCTTCTCTGAGTAAAGACGCACTGTCCGGTGCCTTTGAGGTCCTCTGTGTGAGTAGGAATCTCCTTTTTGCTGCAGAGTCGTCTTAGCACCGCGAGAGGGCCTCTGGCGCGCAGGTCCTGTGAGCCATGCAGCAAACATCTCTGGGCTCGGAGCTCAGTGTCATGGGGGCATAGCCATGGGGTCCCGGGGTGGACGGGTGAGCTCCGCCTGCTGAGAGCTGGGGAACGATTTGCAAAGGACACAACATTTCCAGGGCAGAGGGGCAGAAAGGAAGAAGTGAGACATTCTTAGTGAAGAGGCAGAGAGAGGGCAGAGAGTGTCATGGAAGACGGGCTTCAGAGAACGCCCTGGGACGCGGGGAGGTGCGGGCGCGGGGCTGGCGCGGACTCCGGCGAGACAGACGCGGCCTCAACCACGCAGGAGCCAGGACGGGCGGCCGCCTGGAGGAGAAAAGCGGACTCTTCTGCTCTTGCTGAGTCTGAGTGACACCTGGTTGTCCAGGCCCCAGATAGCAGAATCACCCGAAGGCTCGACTGAAAGCACAGATGTCTCAACCCTTCCCCATCCCCGGAACACCCCCCTAGAGAAGGGAGCTCCCCGGGGTTCACTGGGTGGGGGCCGGGAGGACGCAGCAACCTGCCAAAGAAGGCTGAGGAGGTGGCCGTACAGGAGGAGGTACCCTGGAGACACCGGGACTGAGATGGTCGTCACCGACACATGCAAGAGACCAGGAGTCACGGCCGAGAGCTTGCCAGTCATGAGGTCCTGGTGACTCTAAATGACAGTTTCAGAGGAATGGTGGGGCGGGGCGGGGGCAGCGGGCAGAGCCAGAGGAGGATGGGAGACCCGGGATCCATCCCCGGGTTGGGAAGATGCCCTGGAGGAGGGCATGGAACCCACTGCAGTGTTCTCACCTGGAGAACCCCACAGACAGAGGAGCCTGGCAGGCTACAGTCCACCAGGTGGCAAAGAGTCAGACACGACTGAGCAATTAACACTAGTACTATCTTTAAAGTATTGCTTAAATGAATGTAACTAGTGTTAAAAAACTTTTTAATATTTCAGATTTTTAACATTTTAAAAATAGTTCAAGACTATTTTTAACACTACTACTTATTTTTAAAGGCAGTATATATAATGCAGTATTTTGAATCCCAAGGCTGTCCCACTTGAACTGGGGCCCCTGAGCAAGTTCCCTGACTGTAAACAAAAGTTTACAAGAGTGTCCACCTCTTAGGGTTTTTGTGCAGGTTAAAACGTTCCAGGGTGGTGCGAGGCGTACAGGGAGCACTAACACGGTGTTCTACTTCCTTTAAAAATACTTTCTTATTCAGAACCTGCCCTCCTATTTCAGGGCCTGTCAAAATTAGGGATGCCTCCCTTCTTTGAATTATGAATGCATTGTTCTCTTGTTTGTGTCAGCTACTGCTTTTGCTTTACATCACTGCAATCATCCTATACACACATTTTCTTTTATATATATATAGTTGGTGAGCCAGTGTCGATCCTTTACTATTAACTAAAGCCCATAGTTAATGTCAGGGTTTACTCCTGGTCTTGTGCGTTCTGTGGGTTTTGACTGATGCATAATGACACGTCTCGCACAGAGTAAGCTTCACTCCCCTAGAGATCCCACGTTCTGCATACTCACCCCCCTCCCGCCCCTGGCAGCCACGCATCTTTTTACTGGCTCTGAAGGCTCGCCTTTTCCAGGTTGTCATATAGTTGGAACCCCATGGTATGTAGCCTTTTCAAATTGGCTCCTTTCACCCAGTAATATGCATGGAAGTTTCCTCCTGTCTTTTCGTGGCTCAATAACTTAGATTTTTACCC TCONS_00139539 TCONS_00139540 TCONS_00139541 s 3' 540 TCONS_00139539 TCONS_00139540 TCONS_00139541 s 3' 540 EMBV3_13780 CCAAGCCCAGGAGCCAGGGAACCGACGACCGGCTGGACATCCACTTCATCCACGTGAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39342 GCCGTGCTTTCTGGTCTCTGCCGCCATCTTGTAGGCATTGTCTCTTGTTTTCAAAGGATG Gene GeneID:532829|LPAR3:XM_002686310:210_cdna Constitutive 0 NULL GeneID:532829 3 GENE LPAR3 EDG7 lysophosphatidic acid receptor 3 EMBV3_06216 TTCCAGCACAACTTCCTGACCCGAATGAAGAACCTCTCTCCTCGGTATGGCTCCAGGAAA Gene GeneID:527114|AGT:NM_001114082:29_cdna Constitutive 0 NULL GeneID:527114 28 GENE AGT MGC128034 angiotensinogen (serpin peptidase inhibitor, clade A, member 8) EMBV3_16850 TTACTTGCTGCGCTGGAGTCTTTGTTGCTTTGCACAGACTTTGTCTAGTTGCCACGAGCG Gene BVV0102_382547 + 0 NULL GK000018.2:55444581-55451271 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086995 1 XLOC_052314 Coding TCONS_00086995 XLOC_052314 Coding Coding CCDC114 18:55449293-55477360 j TSS64648 3074 2 TCONS_00086995_5 330 0.122316200390371 13 0.890935651678187 2.87192081852677e-166 9.04067182170612e-96 9.63972395836206e-06 5.27698900678958e-252 1.18857967701644e-134 4.03802478462007e-116 9.99780865179215e-05 1.81871192889805e-18 1.81985287611125e-177 4.16591148826443e-06 9.21849995329061e-05 2.27742513100957e-06 2.5905425134238e-231 1.65086086644884e-25 1.09911973291462e-05 0.000684932628829494 0 0.000173555214035851 1.18090399824045e-05 0 4.61112086955502e-276 0.000198244905140438 2.98439949375523e-06 6.78983815309591e-05 0.00030436827589995 1.56957725074134e-05 5.40479139013291e-05 5.07266864278452e-05 1.57031271835473e-05 1.68922248030063e-40 XM_003587278.2 CCDC114 PREDICTED: Bos taurus coiled-coil domain containing 114 (CCDC114), 0.0 3312 99.89 0.598568640208198 XM_005259413.1 CCDC114 PREDICTED: Homo sapiens coiled-coil domain containing 114 (CCDC114), transcript variant X1, mRNA. 0.0 1326 76.20 0.59206245933637 TCONS_00086995_2 sp|Q96M63|CC114_HUMAN CC114_HUMAN Coiled-coil domain-containing protein 114; 4e-125 375 71.69 0.981884057971015 0 coding 0 0 0 0 -0.035750378332869 0.774082308299662 0.0199617055777158 0.742823493078806 AAAGTGATGGAAGATGAAAGGCGAGCCTACAGCAAAGAAGTTCATCAGCGCATCAACAAGCAGCTTGAGGAGATCCAGCGCCTGGAGGGGGTGCGACACAAACTGCGGGTGCAGATCAGCATTGCCCAGAGCCAGGTCAGGCGGCTGCGGGACAGCGAGAGGCTGGAGAGCATGGGTCACCTGCTCAAGTGCCAGGTCCGGGTGCAGGCCGAGGTCAAGGAGCTGCAGGCGCAGAACCAAGCCCTGGACAGAGAGATCCAGGAATGGGAGAGCCGGAACTCTGCCCACAGCAAGAATGCCAGGTCTCCAGGATGCGTCCAGCATGACAAGGTCAAGAGCCAGCGAAGGATCAAGAGTCTCGAAAACCAGTTGGACAAGGTCATCTGTCGCTTTGACATCCAGCTGGCTCAGAACGCGACCTTGAGGGAGGAGCTAGATCTCCTGCGGATCGAGAGGAACCGCTATCTGAATGTGGACCGCAAGCTCCAGAAGGAGATCCAGCTCCTGAAGGACTCTGTCAGGAACCTCATGGTCTCCTCCACTTCCGCCTACACCGTCAGGGAAGAGGCGAAGGCCAAGTTAGGCATGCTGCGGGAGAGAGCTGAGAAGGAGGTGGCCCAGAACGAGACGGAGGTGCAGATCTTGCAGCGGCAGATCGCACACTTGGAGCAGCTGCACCACTTCCTCAAGCTCAAGAACGGCGACCGGCAGCCGGATTCCGCCATCGTGGAGAAGCGCGAGCAGCGAGCCCGGGAGGTGGCCGAAGGCCTCCGGAAGACCTCCCAGGAGAAGCTGGTGCTGCGCTACGAGGACGCCCTGAATAACTGTCCCAGATGACGGGGAGAGCGACCCGGACTTGCTGGTGGAAAAGTATCTGGAGTGTGAGTACCTGGGGGTGGAGAGGGGCAGGCTCGCGGCCCCAGGCCCCCAGAATCCAGTGCAGACTATGCAGGAGGCCTTGGTGAGCGGGCGCCGCAGCGAGGAGGACCGGCGAGCGCAGCAGGAGCAGCAGCGGGCAGAGCTGCAGCAGCGCGTGGACGATGTGCACTCGGAGGCCGACGACCTGGAGGCCCGCTACCACAATTTTCGCGAGCAGCTGGAGAAGCTCAAGACCAACATCCAGCACCTCTTCACCAGGGCCCAGTGTGACAGCACCCTTATCAATGACCTCCTCGGGATCAAGACCCACATGAGAGACCGGGACATCAGCCTTTTTCTGAGCCTCATCGAGAAGCGACTGGTGCAGCTCCTGACCGTGCAGGCCTTCCTGGAAACGCAGAACTACACCTCCACCAGCATGTTCAACGCTGCCCTCATGGTGCTGGGCCAGAGCTCCGAGGATTTTCCTAAGAAGGTGGCCCCACCTCAGCCGCCAGACAACCTGGAGGACCCCCCAGGTTTTGAGGCCAAAGACGACTATCCTCTGAGCAAGGAGGAGCTGCTGAGCTCTGTAATGAAGGCGCTGGAGGCCCGGGAGCAGCCAAAGGAGCAGCACCTGAAGGAGCTGGTCGAGAGCATCAAGGTGGAGAGCACCCCGAGCATGACCTCCAGCACCCAGAAGGTCAGCTCCAGCTCGCGCCTGGTGACCCAGCGGCCCAGTCAAGTTCCTGGGTCCATCATGAGCCACAGGACCAGCGGCATCCTGGTGTCCAGCGGAGGCCGCGCCACCAGCTCCAACGTGGGCCACGTGACCTTCGGGGACTCCAGTGCCACCACAGGGGGACTGATGTCCAGTCGAGGCTCCATCCCGGGCCGCGTGACCTTCCGATCCCCCAACTCTAGCAGCTACCTGGGGTCCACTGGATACGTGGGGTCCAGCAGAGACCACGACAGCTTTGAGGTCTCCAAAGAGAGGGCTGAAAGCAGCATGTCAACCTTGCTTCCTCAAAACTGCACAAGGAAGAAAAAAATCCAAATTGCCTCTCAGGTCTTTAATTAGTGCTAATCAAAACATAATCAAGAATATAGTTAGTGACAACAGGAAGAAAGTCTGAAAGAAAAATAAGGGACCCAGCACACATTTGTTCTCATGAATACAGTTCAACAACACACAGCCTTTATAACAATGCTTTAAGAACAGGACTTCCCTGGTGGTGTAGTGGATAAGAATCCGCCTGCCAGTGCAGGGGACACAGGTTCGATTCCTGCCCTGAGATGATTCCACATGCTTGCCAGGGAATTAAGCTTGTTCGCCACAACTACTGAAGCCTGAGCACCCTAGAGCCTAGCTCCGAAACAAGGGAAGCCACCGTAATGAGAAGCTGTGCATCGCATTGAAGAGTAGACCCCGCTCGTGGCAACTAGACAAAGTCTGTGCAAAGCAACAAAGACTCCAGCGCAGCAAGTAAATAAATAAATAAAATTAAAAAAAAAAAAACATTAAGCAAATATCATTTTAAAAAAGAACACAGAAAAATCTTTGAAATCACTTCCTGTGGAGGTGACTCACGCTTGTGTGAGTCGGGGCTGCCGGCAGGGGTCGCCACCTTCCACTCTCAGCTATTCTGGAAGTTCAATCCTAGGGCCGTTTGTTATTTTACCTCAAACGTGGGCTCACTAGTTTTGTTTGTAAAATAATTAACCCATTGGAGAGCTGGGATTTAATTTCCCATCATGCATATGCGAAGAGAGAAGAGGTCTATCTGTGATCTGATGAGCAAGCTTACCCGTGTTTATGCAGTTTACAGGCAGGATGTTACTAGCAGGGCAGCACATGTTCAAGACAACCCATCAGGGTGAAAGCCTCCTAGTCACTGAAACTGACCACAAGTGCTAGTTTGGGGCATCCTAGAAAACACTTTTGTTGAAGTCACTTCTGGGTGATATAAGAAACAGGAGATGTTGAATTAATTTTCAGTCTACTACTGCACAGGACAGAGTTAAGGTTTTTGGTAAAAAATTCCTTCACACCTTATCAAATCAGATCCTTTGAAGTAATGTTATAATGGGGAATTCCATCTCTTCCATCTCTTTTTCCCATTGATTTGACAAATATTTGCTGAGTATTAACTATGTGCCAGGGGTTTCCCAAGTGTCTTAGTGGTAAAGAATCTGCTTGCAAGGCAGGAGACACG EMBV3_41228 GGAGAAGCTCAGCCATAAATTTCCAGCAGTAGCGCACATGGCACATCAAAAACCCAGACC Gene GeneID:574085|DAPL1:NM_001025346:145_cdna Constitutive 1 NULL GeneID:574085 2 GENE DAPL1 EEDA death associated protein-like 1 EMBV3_40945 GACAGTATCAGTAGTTTGACTTCCTTTGAACTAATCTAGAAATATCTACTGGTTAAAGGC Gene BVV0102_318348 + 0 NULL GK000002.2:86595791-86630193 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33421 CATATGCATTGGGCCTTGGGTAAGGGAATCCAGAAGCAACAGCTAGAAAGAGGAAAAGGC Gene GeneID:281385|PDYN:NM_174139:718_cdna UTR3_Alt 1 NULL GeneID:281385 13 GENE PDYN NULL prodynorphin EMBV3_32435 CAAAGCCATTGTGCTGGTGACTCGCTCTGGTAGAACCATTTGTGCAAACCCCAAGGACAA Gene GeneID:100140488|CCL17:XM_002694792:616_cdna Constitutive 0 NULL GeneID:100140488 18 GENE CCL17 NULL chemokine (C-C motif) ligand 17 EMBV3_13837 GGGAAAGTAAGCCTTTTCTCACCCAGACCCTGAGGCTTTGAGACCAACAGCCAGCCCACT Gene BVT0102_233357 + 0 NULL GK000025.2:38287456-38329371 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145509 TCONS_00145508 TCONS_00145506 TCONS_00145505 TCONS_00145507 1 XLOC_088851 NonCoding TCONS_00145509 XLOC_088851 NonCoding NonCoding - 25:38292167-38298691 - TSS109029 1468 1 TCONS_00145509_2 101 0.229564032697548 6 0.775869998466963 0.000511058990505019 0.00149421957064271 0.000806545073932529 7.10707009396239e-05 0.000334567186641424 0.000109650577797135 0.000151112461842667 5.67531130178218e-05 0.000189457744819071 0 2.79750705550969e-193 0 9.77229456523514e-06 2.75956139786661e-11 0 1.45984481914888e-62 0 0 0.000642464672053625 0.000432334544978566 0.000772752087681529 1.21244525282135e-156 1.30418724172581e-237 2.78227673490738e-14 0.000862256765384576 1.67389922408123e-43 0.00112154772926639 2.0530217741149e-14 7.80536776507619e-74 0 XM_001256206.5 TECPR1 PREDICTED: Bos taurus tectonin beta-propeller repeat containing 1 (TECPR1), mRNA. 5e-70 269 100.00 0.100817438692098 NM_015395.2 TECPR1 Homo sapiens tectonin beta-propeller repeat containing 1 (TECPR1), 3e-29 134 79.87 0.100817438692098 0 noncoding CGTTGCCAAACCCAAGGTCACAAAGATCTGGCATCAATGGTTTTGGAAGTTCTCAGCTGATTCCAATGTGCTGACCACTTAGAAAACTACTGGCTGAAGAGCTGCAACCTGCAGGTAAACCCCACCTGGCCGGCCTCCTGGCCCCTCTAGGCTGCCGGTGCAGCCGAGTGCTGACCGCTGAGCTAGGGGAGCGGAGGGTGGAGACCAGCGTCTGAGGGGGCCCAAGCTGCAGACAGGATCGCGGGCAGCCCCTGTCACAGAGCAGAGGCGGTGCCGGCTGAGGCGCTGGGTCACCTGCCAGTGTTCCCCTGACACAGGGCCTGAGCATCCCGGGAAAGTAAGCCTTTTCTCGCCCAGACCCTGAGGCTTTGAGACCAACAGCCAGCCCACTCGGGACAGCCCCAAGCCCCGTATGGATGGACGCCCTGGCCTCGCCAAGCTGCCCACTCCCGCCTCCCATGCACAGCGCTTGCCCTTGGGCCCGCCCAGCCTGCCAAGCCCGTCAGCGTCACCTGTGGAGGCTGAAGGAGCTGCCGGAGAGCGAGCGGTCGCCCTCCCGGCCGGCAACGATAACCTTCCACGTCTTCCCGCTGAGCTCGCTCTGGGTGACGCCCTGACGGAAGTACAGGGCCCGGTCCACACAGCCGATGCCCCAGACCTGCACAGAGAGGGGGAAGATGGCCAAGCAAGCCTCCTGCCCTCTATCTTTGGGCGCTGAGGAAGGCCACAGATGAGCACAGCACACCATTCAGAAAGGATGCCCTTGGGCCTCCCTGGTGGCTCAGCGGTGAAGAATCCCCCTGCCAACGCACAGGACACAGATGTGATCCCTGATCCAGGAGGGCCTACCTGCCGCAGAGCAACTAGGCCCGAGTGCCACAACCACTGAGCCTGTCTCTAGAGCCGCACCGCGCCGGGCTCTGCAACCAGGGAAGCCCCTTCAGTGAGAGGCCTGCGCACTGCGGCTGGGGGGCAACCCTCACTCCCTGCAACTGGAGGAAAGCCCCAACAACCAAGACCCAACACAGAAAAAATAAATGATTCTTTTAAAAAAGAAAGAAAAGATGCCCTGGGATGAGAGATAGTGGAAGCAAGAAGAAAAGAGATTGTGAAAGCAACTCAAAATAAGCTTATTTCACTGGACTTGCCTCCGATAAGGTGGCCCCGCAGTGGCGCTGCGTCCGGTCCAGCTCCCCAGCACCCTTCAGTGTGGCTAAGAGAAAGCCACTACGGGGTGGCCTCGGCCTGGACCGAGCAGGACCTGGAGGTAGGCCTGATAAATGCCCTCTGGGACTGCTCCAGAGCCATCCAGAGAGCTTTGATCAGTTTGCGTTTAGAGCACTGAGGACTCAGAGTGTTAGATCCCTGCACCCAGGACCGTCTGTGTCGCTGTCACTGCTGCCGCCAGGGGCGGGTTTCGTTTCTTTGAATCACATTTCCTAGATCACAAGCTCCCGAGTGAAGACAC TCONS_00147272 r 3' 2960 TCONS_00147273 r 5' 4713 EMBV3_38516 ATCTTGGAGAAGGTCAGTGTCCATTGCCCCGTGTTTGACTACGTCCCTCCAGAGCTCATT Gene GeneID:513958|EIF2B2:NM_001015593:109_cdna Constitutive 2 NULL GeneID:513958 10 GENE EIF2B2 NULL eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa EMBV3_18181 TGGTCCAAAGCCTGTTCCTCTCTGAGTTACCACCATTTAGCCACAGAAGGCTGGAGAGCA Gene GeneID:508425|MGC155170:NM_001081516:76_cdna Constitutive 0 NULL GeneID:508425 19 GENE MGC155170 NULL hypothetical LOC508425 EMBV3_29750 AAGACTATCTTCATCATCTTCATGCTGGTGGTCGGACTCATCTCCCTGGTGCTCAACCTG Gene GeneID:538913|GJA4:NM_001083738:245_cdna Constitutive 0 NULL GeneID:538913 3 GENE GJA4 MGC151699 gap junction protein, alpha 4, 37kDa EMBV3_19300 GATGTTCTGCTTGCCCAGAAGGTTCGATCCAGGAGGTGCAAACTGCGGGTGCTAGATTTA Gene GeneID:789103|LOC789103:XM_002694078:305_cdna Constitutive 0 NULL GeneID:789103 16 GENE LOC789103 NULL similar to hCG15295 EMBV3_37945 GGGGAGCCCAAATGTACTACAAATTGTCTTGGCTTAAGAATCAGATGATGGAGGTTCTGG Gene BVV0102_165713 + 1 EMBV3_30630 GK000006.2:95909003-96346731 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210308 1 XLOC_128818 NonCoding TCONS_00210308 XLOC_128818 NonCoding NonCoding - 6:96343900-96344094 - TSS157815 194 0.731958762886598 1 0 0.000140264792993963 0 4.77011104217052e-05 8.5609812281084e-05 0.000178146204688426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000370692309715788 0 0 0 0 0.00099998522190441 0.000617386068881834 3.02018788770118e-05 0 0 0 0 noncoding 0 0 0 0 0.326792270711591 0.161865751883399 0.0975482282838306 0.2897366844374 ATAAAAATGTCAGAGTTGGAAGGAAATTTAGGTATTTCCAGTTCATCCATTTTCACTCTGTGGTTGAGAAGCTAATCTGTTCAATTTCATCAAGCTACTTGTGGCTAGATCTAGGTCCAGAACCTCCATCATCTGATTCTTAAGCCAAGACAATTTGTAGTACATTTGGGCTCCCCCGATGGATCAGTGGTAAA TCONS_00205879 TCONS_00205880 TCONS_00205881 TCONS_00205882 TCONS_00205883 TCONS_00205884 TCONS_00205885 . 3' 2638 TCONS_00205879 TCONS_00205880 TCONS_00205881 TCONS_00205882 TCONS_00205883 TCONS_00205884 TCONS_00205885 . 3' 2831 EMBV3_11916 AGGAGGGGGTGCGGGAGGTATTTGAGATGGCCTGACAGTGGTGGCCGTAGGCACGCCCCC Variant GeneID:513152|RHOC:NM_001046138:98_cdna 573^772 4 EMBV3_28836 GeneID:513152 3 GENE RHOC MGC140228 ras homolog gene family, member C EMBV3_32879 TGATTTCCTGTGGTTCTCCTCCAGCACATGAAGCCAAAACATCTTGGGAGGACAGTGTGC Gene BVV0102_133362 + 0 NULL GK000026.2:47387490-47537543 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25713 TTTTCGGATGGAGGCTTTAGGGGAAAAACATCTTCCTGGACCTGCGCATTCAGCTCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06895 TGTGTCTCACTAGGCTGAAATCAAAGTGTCAGCAGAACTGTATTCCTTCTGGAGCCCTGC Gene BVV0102_235760 + 0 NULL GK000004.2:66214298-66275925 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188179 1 XLOC_114222 NonCoding TCONS_00188179 XLOC_114222 NonCoding NonCoding - 4:66219383-66219922 - TSS140547 539 1 TCONS_00188179_1 42 0.899814471243043 1 0 0.000378637165820299 7.4570876724279e-05 0.000240364213521358 0.000215691610067279 0.000146558131854757 9.95473076486059e-05 0 5.48675649743115e-05 0 0 0 0 0 0 0 0 0 0 0.000538818328138247 0 2.81607806268932e-05 0 0 0 0.000102834565265041 9.14995658609494e-05 2.17408758113675e-05 0 0 0 XM_868063.5 HTR3E PREDICTED: Bos taurus 5-hydroxytryptamine (serotonin) receptor 3E, ionotropic (HTR3E), transcript variant X2, mRNA. 3e-10 69.8 70.76 0.309833024118738 NR_003255.2 TSIX Homo sapiens TSIX transcript, XIST antisense RNA (TSIX), antisense 2e-31 140 70.98 0.634508348794063 0 noncoding 0 0 0 0 0.0128179067796354 0.934832632375415 0.00516559466195592 0.914813124848341 TGGTGTATTGGTTGCCTGTTGCTGTTGTAATGAGTTACCACAAATTTCGTAGCCTAGAGCAACACAATTTTTATTATGGTTCTGGAGTTCAATAGTCTAAAATGTGTCTCACTAGGCTGAAATCAAAGTGTCAGCAGAACTGTATTCCTTCTGGAGCCCTGCTAGAGAACCCATTTCCTTGTTTTCTGCAGCTTCTAGAAGCCACAGAAGCTCAATTTCTTGGCTCATAGCTCCATTCCTCCTCTTCAAAACCAGCAACACCCGGCCCAATCCTTCCCAAGTTGCTATCTCTTTTAGCGCTCCTTCTTCTGCCTACCTCTTCCATTTATAAGGACCCTTGTGACTGCATCCAGCCCATACCAATAGACCATGCTTAATCTTTCCATCTCAAGGTCAGCTGATTTGCACCCTTAATTCCATCTGCTACTTTAATTCTCCTTTGCCATATTCACAGGTTCCAGGTGTAGGACTTGAACATTATAGGGGGCCTGGAGGGACTATTTCACCTAGCGAAGACCAGTAACACAGCAGATTCAAAT TCONS_00181839 TCONS_00181840 TCONS_00181841 . 5' 231 TCONS_00181839 TCONS_00181840 TCONS_00181841 . 5' 231 EMBV3_28441 AATCGCGCTCACCAAACACCTCATCACCTGAGCTGCTCGGACTTGGGAAGGGCACAAAAA Gene BVT0101_037644 + 0 NULL GK000006.2:5509307-5536134 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142123 TCONS_00038458 TCONS_00123620 TCONS_00176735 TCONS_00186525 TCONS_00185881 TCONS_00234065 TCONS_00019199 TCONS_00066221 TCONS_00221884 TCONS_00124846 11 XLOC_086548 XLOC_022282 XLOC_075172 XLOC_106509 XLOC_112577 XLOC_111934 XLOC_143544 XLOC_009879 XLOC_040935 XLOC_135195 XLOC_076389 Coding TCONS_00066221 XLOC_040935 NonCoding NonCoding - 15:79903808-79904119 - TSS49964 311 0.990353697749196 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.51253901417412e-05 1.43414084918546e-06 0 0 0 0 0 0 0.0073339362026624 0 0 0 0 0 0 0 9.66598777156798e-06 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-24 116 80.65 0.395498392282958 0 noncoding CGGGGGAGGTGATAAGTTGCAGCAATCGTGCTCACTAAACACCTCATCACCTGAGCTGCTTGGACCTGGGAAGGGCACAAAACGCAGGCCCAACCAAGTCTGTGCCTCTGAGGACTACCTGAGTGCCTGAACCTGAGCAGCTTGGACCTGGGAGGTGCAGGCAGCCCAGGGCCAGCCACGGATGGTTCCTGGCAGAACAACCTAAGGCCTGAGCAGTGTGGGCAGGGAGGCTACACGCGCTGTGACTGGGGGCAGACCCAATGTGGCTGAGGCACTGTGAGCACACGCCAGTGTTACTTGTTTGCAGCATC TCONS_00062534 . 5' 7446 TCONS_00062534 . 5' 7446 EMBV3_08849 TGACAAGTACAAGGCGTTTGTCATCCCAGAGGCAGAGGCTGAGTGGGTTGGTCTGACGCT Gene GeneID:508216|MRPL28:NM_001045996:96_cdna Constitutive 3 NULL GeneID:508216 25 GENE MRPL28 MGC126950 mitochondrial ribosomal protein L28 EMBV3_02326 AATGAAAGAGACCTGGGGATTGAAATACTGCAGAGAGGTCCCACAGTCCCTGTTGCAAGG Gene BVT0102_112931 + 0 NULL GK000004.2:113072674-113083335 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182839 TCONS_00182841 TCONS_00182842 1 XLOC_110997 Coding TCONS_00182839 XLOC_110997 Coding Coding ZNF398 4:113022073-113077010 o TSS136576 5946 1 TCONS_00182839_9 188 0.104439959636731 2 0.891801368865589 0.00245958355556512 0.000514848423238459 0.0015990727013842 0.00020645259959617 0.00090931023123755 0.000631523505857654 0.001199743835438 0.000893884591082897 0.00117673252560991 1.50580657752304e-16 5.15821150953827e-05 3.22617583645877e-05 1.87638828236599e-05 0.00084009032979421 0.000280306655759017 6.77252900549484e-85 0 9.14714990307093e-06 0.00119610100469261 0.00107240040275939 0.000474208116651981 4.6343675184901e-05 2.88007943587243e-05 0.000142283578475875 0.00185656350026875 0.0016797365641858 0.0010423183314327 6.85779462450135e-05 2.0380076867053e-05 0.000175605917971569 XM_005205857.1 ZNF398 PREDICTED: Bos taurus zinc finger protein 398 (ZNF398), transcript 0.0 9458 100.00 0.881769256643121 NM_170686.2 ZNF398 Homo sapiens zinc finger protein 398 (ZNF398), transcript variant 0.0 1108 68.33 0.55079044735957 0 coding 0 0 0 0 -0.110030393228761 0.483886624845317 -0.0931712898291141 0.240660266348962 GGCCAGTTTCGACTTGTAAATGAAGCCCTTGCCGCAGTCCGCACAGGCGAGCGGCCGTTCAGCTGCACGCACTGCGGCAAGAGCTTCATCCGCAAGCACCACCTGATGAAACACCAGCGCATCCACACTGGCGAGCGGCCCTACCCCTGCGCCCAGTGCGGCCGCAGCTTCCGCTACAAGCAGACGCTCAAAGACCACCTGCGCGCGGGCCACGGGGGCGGCTGCGGCGGAGACCGGGACCCCTCTGGACCGCCGCCGGACCCCCCTGGGCCCCTCCTACCCGGGCTGGAAGCCTCGGGCCTGGGCGTGAACCCCGAAGGTCTGGAGGCCAATCAGTGGTATGGGGAAGGCAGTGGGGGCGCGGTTTTGTAAAGCTGTCTCCTTTCAGGGTTGTCTGTGTGGGCAGGGTAGGGGAAAGAGGAAAGCCCCGCCACCTCTCACCCCGCGGTAAGGACTGCTTGGCACGTCGAGGAATGTGGGGTCCTGAACACTTGACAAGAGCCGTGTGTGAGTTTCGGAACTTCACAAGAGCACCACGTTGCGAAACCCAGGAAGACCTGGAAGAAAGCCCAGCTTCCCCATCTTTTCAAAAAAAAATATGACCGAAGCAGAAGTTAGAAGAATGTCGCAGAGGTTGGAAAGCAAGGTTCAGCCTCTGATAATCCATCACAGGTTAATAAGTTGAGAGTGGTTGAGCTCTATGTAGAGTCAGGTGCATGGAAGAGCCTCCAAGCTCTGAAGCCCACCGTGAGGCAGAGAATGTTTGCCCTAACCTTGCTCACTTCCTTGGTCGTGTGATGGCTGCTGGAAGCCAGTACCCAAGCCCTCCCCCTGCTCCTGCTCCCCTAGCAGAGCTCCAGTGTCCTGCCCCGCCCGAAATGATGACTCAAGACTGCCTTCCTAGGTCTCCCGGAGTACTCATTCTAATATATTTTGTTTAATATTGAGTGAGCAAAAATCTTGATGTTAAAAGCTTCTTAAGGAGAACAGTTCTTTCATTAGCTTAATTTGAAGCATCCAGGCTTTTACTGCCATTTAAGCTACTAGAAAGCTTTGCCAAGGTCCTAGTTAAGAACTTGGAGGCAGGATATGCAGCCCCAGCTTTAAAAGCTAGAGATCCCAGAGAAGTGACAGAACAGCCTAGAGTTTGTGCCTGAACCATGTTCCCGAGAGCCACTATATGCCATATTCTTCCTATCATTTCCAAGCCAGTAGGCTGGCTTTTCCATTCCTGGTGTCTGATATTCTGACAATCATCAACGGAAAAGGCTACAGCACCTTCTAGAAGCATTACAGAGTCCTGGAAAGTGCCCAAGGCCTCTCAGCTTTTGCTTCCTCAGTGGTGAGATGACAGTTACAATGCAGCTTTCTTGAGCCGGCTCAACCCCCCCGCCCCCGGTGATGGACAGATTGAGGGGCTTCATAGACCCCTGAGAGCTAAGCACCAGACGGGGCAAGGGCAGCCTCTTCCGCTGGCTTTGCTTCTGGGGAGATTTGCCACCATGTGTACCTTTGTAAGGGTCGGTCAGTCACCAGGAAGCATCTGAGCCTGGTCCCGTTCCTAAGCGACTTTGCAGTCTGGCCACTTTCCCTTTACAGATCTCACATTTTCATCTGCAATGCAAGGCTGGTGAAAGGGAAAAAGTGAACCTTTAGGATTAAAAAATATATATATTGTGGTACATTCCTTCTGCCAAAATCCTATCTATCTCTGGTTGTTATCCAAGGAAAGCAAAACAAGACAGCAAAATCAAGGCAGAGATGTTCTTGCTGAAACTTGCCTGAAATCAGTTTGATTTGTTGTTGACTCGGTTGGAGACTGGGATAGAAGAGAAGCGCGCAGAAGCCCCAGGTCCTGAGCAGAAAAGTTGTTTGTACCTCTGGTGCTCTCCTGTTTCCCCGGAACCTCCCTATGGTGACTGGGACGAGGTCTTTGAGCATTTAGGCAAGGCACTCTCTTGACGAAATGATACGGGAAGGACCCGTTTTCCCCGTCGTCACCCAGCGCACACTTCACCCTGCCTCGTTAGGTGTGACTGCACTAGGAAAAAGTGTCAGCCCAGCTTTGCTCCCGGGAGGGTGCTTCCTGAACATGCTGCTTTCTGGATAATCACAGGTATAAAATATCTGCTCTGTGACATTCACAACACCACGCGTCACAGGAGCCCTAAGAAATGTGTGTGAGACCTAGTCCCCTGTCATTACTACAGTTGGAAGGCAAGGGTATGGAACACACCACGAGAGATGATGAACAGAACTTTGACATACTGGATTGAAGAGTTTTCTAGCTAGAATCTGGATCCACTACCATGGAAACGGGGAGCCCTGGGGATCTCAGTCTGAGTTCCAGCTTCACGGGTAACCACCTCCCCACCAGGAACTCAAGACTGAGATCAGCTCTGGTTTGCGTGTCCCTAACGAAAAAGAAGAGTCACAATGCTGTCCCCCGTGGTGAGCTCCCTTCTGAAGAAACGGACTTGCACGTTCTCCAGGGTTTGCCGGAGAAGGCACCCCTCCCTGCACTAGATGCGGTGATGGGTAAAATGACCTGGAGAATCCTTTTACTCGAAGGTTTCCTGAGGACACAGAGCTTATTAATGAAAGAGACCTGGGGATTGAAATACTGCAGAGAGGTCCCACAGTCCCTGTTGCAAGGAACTCTAGCCACAGTTTGGCAAGAAGTGAAGAGTTCACATACCCACGAGGCAAGAGCCATGAAGCTGAGTGAAAGGGAATGGCAGGGTCCAGCCAGAAAGATAGAAGTGGAGGTTATCCAACTGTCAACCATCAAACAGACCAGGGTGCAGCCACTGTACCTTCTGGTCTCCTTTCCCTCCACAGTCTTCTCACCATGTAGAAATCCAGTCCGGGTCTAAATTAGAATTTGTTTGCTTGAGATGCAAAAGTGGATAAGTGGGAAAAAAAAAAAAAAAAAAGACCATTGGGAAAGATAAGTCCAACAGAGAGGTTCCAGTGTGTGGAGAAACTTGGCTCAGCAGGGGCTTCTGAGACAAACCATACCTTTAACAGAATCTGAGGATTGGTCATCCCGACTGGGCTCAGTAGGAAGGAAGACTGAGAAACGTGCGCTCCATCAGTCTGCCCTCTGGCCGGGAAGTGTGTACTGTCACACATCAACAGGCACCATCTCCGGGGGGGTGGACCCAGCTGTTGACTGTAACCAGATTCACGCTTTGCTTCCTTACTAGATTTTTGTTATCACCGTAAGATGAACCTCTGGTTCCGCCCCCCATGTGAACCTAAATGGAGTTGATCGTCTGGAAAGTGAAAGAAGATGACTCTGATCTTTCTTGCTGGGTGTTTGTTACTAGAATGCCCTGGCCGGGTTCTGGCTGCTTTATATAGCTTCCTAGCAGTGCTTTACAGAACTTCCCTCACCATTAATAATAGCCTGCAGACTTCCCATTGGGGGACTCCGCTGGGCTTCTTTGTGGAGCATTTTAAAATATTTGGGTATCCATGGCTATCTCAGCCAGAACCAGACTCTAGAGCTTACCCGGGAGTAATAAATGTTTACTGTCTCAGTCTTAGAAAGTCTGGTTGATAAGAGAGAACCCGAGTCCCTTTATATTTGTGCATTCCAAATGGGATGGAGAACCCACATTTCCGCTCACATGTCCTTTGGAGGAGGAGCAGAACACACTGGGTCCCCGCCCCCCCCTCCCCCCCGCCCCTACCCTATATCCTACGCTGTAGCTTCTTAGACAATAAAAAGCATCCTCCTCAGCTGCCTGAGGACCACTGAGAAGCAGGGAGGAAAAGTGAGATTCTCCCAGAATGCTTTCCCAGACCAGGAACTCTTACCATCAGTGCCGTGTTCTCTGCTCTTGGTGGAAACCTTTGACCCTGCTCTCTTCACCCTACAAAGGAAGCAGTCTTCTCACAGGGTTTTACACAGAGGACATTCTTTGACTTGGGAAGTGTCAGACTCTTATAAGCGGAAGATCCTCCAGGTGGGGCACATGGGCGGGAGATGGGGGCAGGGAGTGCTCGGGCCTCACAAAGACATGTCTTGTGGGTTAGTGCAGCTTAGTGGTGTAGGGCGTGGGTTTGGTCCAGACCTAGCGAGTCCTGACGTCGTAAGAAGTGACATAACAATTTAATCATCGTGAGTCTAGTTTTCCTATCTGTAACATAGAATGATGCTAGGTCTTGGATGTGTCAGGGTTTGGGGGGAAACTGTGAAAGTACTTGGCACAGAGCCTGGCACACAGAGGTGTCAGATCGGCAGCGGTCAGGAAAGGTGCAGGCCAACTGGAAAGGGAACTGAGGCCATGCTGCAGAAGCGCGTGGCCACTTGATGACTTAGCTCCTGCCTCCCATCTATTGCTTCCATTTAGCCTGTTCTTTTACCTATTCTGTATCTCCTGACTCCCTTAAGTTTGTGTGTGCCGTGACACCAGCTGGTTCAGATTCTAAGGTGGGGAATCTGGCCCTTCTCTTGCTATGTGTGTGTGTGTGCTCAGCTGCATCCGACTCTTTGCAACCCCACGGACTGTAGCCCACCAAGCTTCTCTGTCCATGGGGTTCTCCAGGCAACAATATTAGAGTGGGTTGCCATTTCCTACTCCAGGTGATCTTCTCAATCCCAAGGATCAAACCCCTATCTCTTGCATCTCCTGCATCTACAGGCGGATTCTTTACCACTGCCCCGGGGGCTTCCCTTCCTCTTTCTATACCAGGCCACAGAAGTCTCCAGCCTGCCCTTGGACTCCCTGCCCTTGGGTCAGGTGCTCATCTTGGCTTAGTCAGCCATGTCAGGAGGGAGGGTCCTAGGTCCCTCCACTTGATCTGGGGTTGGTAGACTCTTGGGAATGGGCAGACGGTAGGGCGTTTCTAGTACTGCCTGGAGAGGAAAGACTCTGCTTCCCCTGTGTCGGGCTTCCTTGAAAGACTTCTGCTTCGGCAGCACAGTGCAGACCAGAGCCCATGGCCAGTACAGAAAGGACCTGGAGGATGCTATTGCTGTATCTTGCAAAAGAAGTAATTTGTTACTTTCTGGGGTGTTATTCTGCCTTCCCAGCCAGGCTCCACTTCCTTTTCAAATAGGTGACTCAGGCCATAATTCCATCTCTACACACATACACAATGACTTTTGTCACATTGCCTCTTGAAAACAAAAAATTACTCCGCCCCTTAAGACCAACCCCCACTGAAGAATGCAGAGAGATACAGTCAAATCAGAGAGGACTCAAAAGCACCGTCCTGCAATGTTCGTAAAATTGCCAGGTTACATTTCAAATAAAATATCTGATAAAACCTCATTGGGCTTTGTGGCTTTGTGTCTGCTATTAGCAAAGCCAGCATTTACTGAGAAATCCTGCAGCTGATCTAAAAATGAAGCTACCCAAGAACTGGGGCCACGTCTTGTGTGTCCCTCCTGGTGCCGCATGCTGTCAGGAATGTGGATCCTTGATGGATTAATATGACTGTGCAGTAGGAAGACCACCTGTTGTTATTTAGTCGCTCAGTTGTGTCTGACTCTGTGTGACCCCATGAAGCCCTCCAGGCTTCTCTGTCCATGGAATTCTCCAGGCAAGGATACTGGAGTGGCCTGCCGTTCCCTTTTCCAGGGGAACTTCACACCTCCTGCATTGGCAGGCAGATTCTTTACCACTGAGCCACCCAGGAAGCTCCGAAGAGTAGGGATTCTGGTTGAGATTAACATTTTCTACCTACTTGGTACAATGCAAGCCACTTCGATTGTGTAGATTACACTATCCTAATTCTAATGGGCAGATTGAACAAGGTGGTAATATAACTACAATAATTGAATTCCAACTCTACAATCATAGAATTTAAGGTTTTACTAACTAGGACTGTTTTCGTTGCCTGGTTTCTCCCCAAATCCTGCCCTATCGAGTGATGCACACAGCAGAATGAACACCTTGGAGAGGTATGCATTATTACAGATTAAAGTGTCTC TCONS_00185331 TCONS_00182841 r 5' 0 TCONS_00185331 TCONS_00182841 r 5' 0 EMBV3_12511 TCGCCACCAGGGAAGAGGGCTAATGAGAAACACACTCTTGCAGGCACAATGTTCACACGT Gene BVV0102_023082 + 1 EMBV3_12354 GK000004.2:69327845-69331791 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181907 1 XLOC_110724 Coding TCONS_00181907 XLOC_110724 NonCoding Coding HOXA9 4:69329956-69334928 j TSS136049 1709 3 TCONS_00181907_1 67 2 0.656608328304164 0.000128070688832284 1.94435084344423e-21 0.000295366193963927 4.75000410785094e-53 5.71042124847034e-14 1.00135561048788e-50 6.56776002451303e-05 1.88456556081281e-08 5.08210329394487e-11 0.000178756817350099 4.90635682163869e-06 9.16198914466225e-20 1.43940238748679e-37 1.7410343737083e-158 0.000105623110755205 4.90604759334968e-18 6.33992508517551e-05 4.33221091189447e-05 4.11524206053868e-05 2.45882163107881e-22 1.41343050902838e-05 2.1080134724539e-10 5.30136749867777e-05 0.000297709467831913 1.59010209706186e-72 4.86297611105746e-16 2.53039586948197e-34 5.58876697315268e-89 3.10380908977838e-11 9.10280409440413e-12 NM_001105617.2 HOXA9 Bos taurus homeobox A9 (HOXA9), mRNA. 0.0 2526 100.00 0.818607372732592 NR_037940.1 HOXA10-HOXA9 Homo sapiens HOXA10-HOXA9 readthrough (HOXA10-HOXA9), non-coding 0.0 1590 85.26 0.818022235225278 0 noncoding 0 0 0 0 0.0361642361854428 0.789884251680647 0.0109239609775405 0.813926690457796 CCTCTTCCGGCGCGAGCAGAGGAAGGGGCACCCGGTGCCTCTCTGCGCGGCTCCGCAGCCTCTTTCTCCGGGAGAGCCTGGCATTTGCGGGTTTTCGCCTGGGACAGGGATGTATCAGGGTTTGGGGGGATTACTGGAACTGTTGGGGAGGATGAAGGAAAAACAGAAGATGGAAGCGACCGATGCCGCCCGCCTGCCCTCGCCGCCAGGGAAGAGGGCTAATGAGAAACACACTCTTGCAGGCACAATGTTCACACGTGAATTTAATTACCCCCTTTTAGGGGTCGCCTCTTTCTGTTCGGATTGGGGGTAACCCGGCTGCCAACTGGCTCCACGCTCGCTCCACGCGGAAGAAACGCTGCCCCTATACAAAACACCAAACGCTGGAACTAGAGAAGGAATTTCTGTTCAACATGTACCTCACCCGGGACCGCAGGTACGAGGTGGCCCGACTGCTCAACCTTACGGAGAGGCAGGTCAAGATCTGGTTCCAGAACCGCAGGATGAAAATGAAGAAAATCAACAAGGACCGAGCAAAAGACGAGTGATGCGACTCGAGTTCATTTAGAAAAGAGAGAGTGAGCTAGAGAGAAAGAATTGCCCGTCCTCTTCTCCTATCCCCACCCAACCCCACCCCACCCCAGCCTCCACCACCCTAAAAAGGCGGTTGGAAACTCCAGGCCTCATGTCCTAGGCAAACCCTGTTCAGGCTGGTTCCTTGGCCTGCCACTTTGATGGAGGAGGTATTGTAAGCTTTCCATTTTCTATAAGATTAAAAAAAAAAAAAAAAGGCGGGGGCATTAGCGCTGATGGCTATATGTGCTAGCTTGTATATATTAAAAAAAAAAAAAAATCTACCTGTTCCTGACTTCAAACAAACAAAAAAAACTACCTTTTTATAATGCACAACTATTGACGGCGGGCTGTATAGTTTTTAGACTGTGTGTAGTTAATTTAATTTGCTCTTTGTGCGGCAGAGCGATCTGCCCAGATACTTGAATACTGTGTTTTATTGTGGTAATTATGTTTTGTGACTCAAACTTCTGTGATGGGTGATGCACCCGTTGTGATTGTGAAAGCTAGAATTCGATTTGAACTCAGGTTGTTTATGAGGGGAGAAAGCAGTTGCATAGAGTATAGCTCTGTAGTGGAATATGTCTTCTGTGTAACTAGGCTGTTAACCTTTGATTGTAAACTAGCTGTAAGGATTTCCCAGTAACATAAAATTTTAAAACAAAAAAAGAAAGCGTTCTCTGGGATGCATAGATTCATGATTTTCTCCATTCTTGAAATGCGGACATTTTAGTTTCTACATGCTCTCTAGACCTATCTCGTCCATTGTGTATATATAATCCACATATTAAAGAAAAAGTAAACAAGCTTGAATATTGTTTTTGCACCAAACAGTGAGGAAATTTGGAGCTATACTACGTATGTGCAGATGGTTACTACCTATGGTTTACGTTTAATTTTAATTGGGGGAAAAATGAATGCTTATTGTAATGGAGTTAATTTTATTGATAATAAATTATACACTATGAAACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGGCTGAACGCACACTGTATATTTTGCAATAGTTACCTCAAGGCCTACTGACCAAATCGTTGTGTTGAAATGATATTTAACTTTTTGCCAATAAAATATATTGATTCTTTTCT EMBV3_00552 CTGACAACGGCCCAGCCATTCCTGTTGTGTATGACTTTGGCGATGCCGACAAAACTGCAT Gene GeneID:786046|LOC786046:XR_083614:406_cdna Constitutive 0 NULL GeneID:786046 3 PSEUDO LOC786046 NULL similar to intelectin 2 EMBV3_42456 TTGTCTGTGGAGACTGATTACACCTTCCCACCGCAGCCCCAGCCAAGGTTGAAGCAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27968 GAACAAAGTGAACTGGCAGTCCTACCTGCAGAAAATCACCAGCGTGTTAGCATTTTCTTT Variant GeneID:282657|ATP6V1H:NM_174704:14_cdna 288^480 2 EMBV3_26147 GeneID:282657 14 GENE ATP6V1H MGC128141 SFD ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H EMBV3_33803 ACAAGCCTTTTGTATCCCACTTCATGCCTGTCATGTTCTCCCTGACTTGGGACATGGCCT Gene GeneID:281556|TUFM:NM_174207:209_cdna Constitutive 0 NULL GeneID:281556 25 GENE TUFM MGC140641 Tu translation elongation factor, mitochondrial EMBV3_15982 GAGAGATCGCGGCGCTCACGGACTTCTCCGATGAGTTAAAAAACAAAACTGTGTGTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25054 AGCAGCTCTTCAAAAAATTTAAGGAGATTTATGTGCAGGCGCCTCGTTCCTTCACAGCCG Gene GeneID:541046|LGI2:XM_002688157:37_cdna Constitutive 0 NULL GeneID:541046 6 GENE LGI2 NULL leucine-rich repeat LGI family, member 2 EMBV3_02223 ACACCATGTGCACCCTGGACTTCTATGAGGCGGCCGTGGTGTGCGTCACCCTCCTCAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06251 CGGTGGGTGTGACACAGCAGACTGCATCTGGATTCCAGTTCTGAGATGGATTTAAGCATT Variant GeneID:505979|STON1-GTF2A1L:NM_001080229:53_cdna 475^794 2 EMBV3_16533 GeneID:505979 11 GENE STON1-GTF2A1L ALF MGC127834 STON1-GTF2A1L readthrough EMBV3_08320 GGCCCCCAAGAGAGGTTCATTGAAGCCGAGCTGAGCGGCAGCCAGATGAGCCTGTCCGGG Variant GeneID:527641|SYTL1:XM_002685692:353_cdna 602^856 1 EMBV3_01618 GeneID:527641 2 GENE SYTL1 NULL synaptotagmin-like 1 EMBV3_29209 TGTGGCCTACTGGCACAACACGCGACGCGTTGAGTTGCGCAGCACGAGTCTGAGAATGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40066 TTTTGCCCAATATCCAGGCCGTGTTGCTCCCGAAGAAGACTGAGAGCCACCACAAGGCAA Gene GeneID:541108|LOC541108:XM_002686056:283_cdna Constitutive 0 NULL GeneID:541108 3 GENE LOC541108 NULL similar to histone cluster 2, H2aa4 EMBV3_25007 GTGACCAGAGAATACACCATCAACACACACAAGTGCATCCAGAGAGTGGCCTTCAAGAAG Gene GeneID:100295855|LOC100295855:XM_002700333:68_cdna Constitutive 0 NULL GeneID:100295855 X GENE LOC100295855 NULL similar to ribosomal protein L31 EMBV3_20811 AGACGGCCTCCAGATGCGACCGAGTGCCGGGCACAAACTCTTACAGTATGGAGGCAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09468 GAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAA Gene BVV0101_039819 + 0 NULL GK000007.2:10312543-10323560 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210913 1 XLOC_129423 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_03392 TGAGACTAACGAATTGGCTGGCGCTAGGCTCTGGGGTGTGTGGAAAGCAAATCATGTACA Gene BVT0102_009514 - 0 NULL GK000030.2:142827684-142843671 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248609 TCONS_00248607 TCONS_00248608 TCONS_00248610 TCONS_00248611 TCONS_00248612 1 XLOC_151645 Coding TCONS_00248607 XLOC_151645 Coding Coding LOC523454 X:142842463-142856271 j TSS185890 3550 2 TCONS_00248607_6 95 7 0.743391033533715 1.38674553142301e-08 3.78631944135449e-05 5.9008850522217e-14 1.17783906365349e-23 0.00013483021094302 0 0.000361044692416886 0.000704123516308899 0.000559457963511275 0.000414571958848812 0.00158973442609276 6.05803255411449e-05 0.000149458892797114 0.000142380459595301 7.93044737213583e-05 0 0.0022303071261102 0.00306970232923452 3.61478456068362e-102 3.21501559899304e-221 0.000149433415080117 0.00484631154636521 0.00476358784061916 0.00352589417594165 7.0636355127102e-53 7.45122547118674e-29 0.000259207666745582 0.00146193004953407 0.000762457802274389 0.00329811419441525 XM_005200563.1 WWC3 PREDICTED: Bos taurus WWC family member 3 (WWC3), mRNA. 0.0 6296 100.00 0.983098591549296 NM_015691.3 WWC3 Homo sapiens WWC family member 3 (WWC3), mRNA. 0.0 1667 85.96 0.40112676056338 0 coding 0 0 0 0 0.0444960598526391 0.742888043174349 0.0093224458872167 0.844285433112489 GTGTGGCCGGCAGCCCCTGAGAAAGACGCAGCTCATCTTCCTGGAGTGAAGCAGCTACAGGAGTTGGCAGGCAGACTCGGTAGACAGTGGCTGTAGCAGCTGTGCCCAGACCAGCCCCCCGCACCCAGAGCCCTGCTGCGTTGGTGTTGACTCCATCCATGGACACACGTTTGCTGGCCAGGCAGATCCTTACAGCCCCGAGAAACTTCAGCCTCCAGCTCTTAAGGTTGACAAGGAGACCAACACAGAAGATCTCTTCCCCGAAGAGGTAGCGAGTCTTCGGAAGGAGAGGCCCAGCCGCAGGGCCCGCGGCTCACCCTTTGTTCGGAGCAGCACCATTGTCCGTTCTCAGACTTTCTCTCCTGGAGCACGAAGCCAGTATGTTTGCAGACTTTATCGTAGTGACAGTGACAGTTCCACACTGCCTCGGAAGTCCCCCTTTGTGCGAAACACTCTGGAAAGACGGACCCTTCGCTATAAGCAGCCCTGCAGGTCCTCCCTGGCGGCACTGGCAGCACGCACATCCCTAGACCTGGAGCTGGACCTCCAGGCGTCGCGGACGCGGCAGCGGCAGCTGAACGAGGAGCTGTGCGCCCTGCGCGAGCTGCGCCAGCGCCTGGAGGATGCCCAGCTCCGCGGCCACACCGACCTGCCAGCCTGGCTGCTGCGAGACGAGCGCTTCCGGAGCCTGCTGCGGGAGGCCGAGCGGCAGACGAGACAAACCAAACTTGACTTCCATCAAGAACAGGCAGCCGAGAAGATGCTGAAGAAGGCTTCTAAGGGGGTGTGCCAGCTGCGTGGGCAGAACCTCAAAGAGCCCATCCAAGTGCAGACGTTCAGGGAGAAGATAGCATTTTTTACAAGACCAAGGATTAACGTACCTCCTCTGCCTGCCGATGATGTTTGATGTAGTGCTTTGTACACATGAAGTATTTATCTGCCTGTTATATTTTAATGAAGTTCTTAGGCTAGCTAAATTTGTCTTTAAAATATTTGTGCAAAGCTATTAATATACACATTTTGTAAAAAAAACAAAACACATATATCTATACATATATATTTTGTAATAGTGACGGCAACAGGGCTTGGTTTTTCCTTGTTGTGAAATTGACATCTCTGAAGACAGGTTATTTTATAAGAGACAATTATCATGTTAAGAGTGTACAGTTTTTAACGCTGTTTTATTTGACTTAAAGGCTGGAAGACAGAAACGAAGTGAGTTCAGGCAAATTCACTGTATTGTAATTTATTTATAGTACTTTTTTTTCCTTGAAGGAAAATACTGACTTTAAGATGTATTTTAAGACTGAATTTTGTTCTTCAGTATTTGTCACGCGGTAGAATGGAACTTGGGGCCGGTTTTGTGTCTGACACCCGAAATGCAAACACTGTGCTGAATCCTCTTCCTCCATGCATTTATCACGTACATCGTACACTTTGGCACCCTTTGTGTTCCCTTAAGATGCCACCGCAGGGGCTCAGTCAGGTGCCAACGCAGGGGCTCAATCGTAAGTCAGTGCCTGGTGCCCTGCGGGCACCTAGTGTCCCTGTGGCCCCAGGTCTGAAGGCGGTCCTAGAGCCCCTGGCGGCAGCCACACAGCCCGCCCCCCCCCGGCCTCTGCCTTTCTAGTCCGCCCTATCCAGTTGAGACTGAGACCCAACAAAGAGGGCAGTGGTGGAGCTTCTGCTCTGCTTGCAGGAAAATGAAGAGAGAAGGAAGGTGCATTTTCAGCGAGTCAGTGGATCCGCTGATGGATGGAGCCGTCACAGCACGGACATGAGAACCTTCCAAGGCGCTTTTTTGAGGAAGCAGACTTCTGTGGGAGCCATATCTAGCCAGCAAGTGGCTCACAGGAGAGCATTTGCTTTCAATCAGATGGCCCCCGCCCCATACTGGAGTTGTCCTGATATTTCTTAAGGAATCTTAGAACTAGCTCATGAGGAAAAAAATTCTTTACGTAATACAACTATACCATCCTCATAAAATGCCAAATGGTATAGTTTGTCTACTACGTATTTATTATCTATGGAATGCACTCTCCTTCATGAGGCCTCAGAGAAGTAAACGAGGTGAATCACACAAAATGTAAGAGAAAACGCCCTCGTCCCCACACCGTCTTTCTGCCCTTCCCTTGAAAATGTCTCCCCTCCCCCCTTAATCAGCAGCATCTTTTTTCCCATTAGTCTGTAACCACTCCCTTGTATAATCTGCCTTCATTTTCACATTTATTAAAAATGAATTTTGTAAAAGCATTTCATTGACCTATCACGGACAGTAAAGTTGTCAGTGGTGGTAAAGCTGAAAACTTTATGCTTTTTCACACTTGCCACTTATTGCTATGAATCTCTGCCTCTAGTCTTGATTTTTTTTTCTTTTTTTCCTTTGCTTATTTCCCTATATACATACCCACAACAGAGGTAGAGACACATAAAACATCAGTGCCTGCCAAAAATGCCAGGAGACAGCGTTAGTGAATTGGTCAGGATGGTGGCAGGCCCTCCCTGTTCCCAGCTGTTGAGACTAACGAATTGGCTGGCGCTAGGCTCTGGGGTGTGTGGAAAGCAAATCATGTACATTTCAGGTGCATGGCTCCCCGGAAGTGGGGCAGTCCCAGCCACCTTGCCTAGGCGCTCTGTAGCCACATTGCCACTTGAAGTGCTAACTGGGTTGAAGGGTTGAAGCAGCTTTTACTTTCAAGCCCTACAAAGTGGCAACGTAGGGAAACCCACTGTGCCTGTATAGAAAGCCTGCAAGGATTTGCAGATAAATGTCACTGCCCAGTCGAGACTGATGATTTTTGTTTGGCGTGCTTCTCCACCCCAGAGTTTAATGAAAACAAAAAGAAATCCCTGCTTTGCCTCACTAGAAACAGATCCAGTCTGTGCTTTGACATCACTTCCAGGAGCGCTGCTTGCACCTTTCTGTGTGTCCCTCCCTCCCTCCTGAGTCTGTCTGCTTTTGCACCTGAATGGGACCATCCTAAGAAAGCAAAGAAAAGCCAGGCAGATGAAGGAGGGGAGGTGATGGGTTTCCTGCTGCTTGGCAGTCTGTGGCCAGAAGGGGCAGGTGGACAGCGATAGAGGCCAGCTGAGGAGGCAGGAGGACACAGTGTCCCCTCATTGGCTTCTCTTTCGTGACTTGATTTTGCAGCTTCTGACTGGTTAAAACTGCCACCCCCTGGAAAATATCCCACATGTCTAAAAAGTGAAGTCCTATCGTCTTAAGGGGTATTTTCTTATGTTTAAGTTTGTCCATAACTGTGCCTTGTGGTAAGAAACCTCTGCCTTGTTTTATCAGCAGTTTAGTCCAGAAACAATCCAAAGTCTGCCACCAGGGTCCTTTAGGAACACTACAGCAAATAAAAGGGAATTTGGTCTTCCATTCATCTGGTAACTTAACTGTCACCACCGAAATATGTAACCTTCTGTTGTGGGAATAAGTTATAATCAGTATTCATCTCTATTTTTGTCTCTGTTCTAATTGTGTCATTTGTATCTTTTGAAAGTATTTCTTCTATAAAATTAAACTAACCTGCCTTAAAAACAGAAT EMBV3_13490 ACCTCAATTCCACGCCCTTCGAATAATAGCATGGAGACTTACTTGACCAAGATGCGGCGG Gene GeneID:100337293|LOC100337293:XR_083820:74_cdna Constitutive 0 NULL GeneID:100337293 13 PSEUDO LOC100337293 NULL ankyrin repeat domain 26-like EMBV3_23472 ACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTTCTCCGGGCTGGTGA Gene GeneID:782019|IER5L:XM_002691640:345_cdna Constitutive 0 NULL GeneID:782019 11 GENE IER5L NULL immediate early response 5-like EMBV3_39365 AGGTTGAAGTTCCGACTAATACCTGCGAAGTCAACTAGTGTGGACGGGGTGTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_25324 AAGCACTTCAGTCAGAGCGCGACCCTCATTAAACACCGGAGAACTCACACCGGAGAGAAA Gene GeneID:522836|ZNF394:NM_001077955:218_cdna Constitutive 0 NULL GeneID:522836 25 GENE ZNF394 NULL zinc finger protein 394 EMBV3_32938 GAGACTCACCCTATTACTTCTTGACTTCAGACATTCCTGAACCCCTGGTATGAGGCCAGC Variant GeneID:539247|APH1A:NM_001034670:139_cdna 494^621 1 EMBV3_36438 GeneID:539247 3 GENE APH1A MGC128098 anterior pharynx defective 1 homolog A (C. elegans) EMBV3_18000 TCACAGATCATGCCTGCTTACCTGAATGTTAACATCTTCTATAACCTTGGTGCACTTATC Gene GeneID:100138153|CNNM3:XM_002691165:225_cdna Constitutive 2 NULL GeneID:100138153 11 GENE CNNM3 NULL cyclin M3 EMBV3_32901 TGTGCACTGGAGAGAAGGGCTTTGGTTTCAAGAGCTCCATATTCCACAGAGTGATTCCAG Gene GeneID:785768|RANBP2:XM_002691336:502_cdna UTR3_Alt 2 NULL GeneID:785768 11 GENE RANBP2 NULL RAN binding protein 2 EMBV3_01146 TTATCTTCCACTGAAGGCAGAAAGAACTCTGGGAGCAGCAGTCTGCACGGTTGTTCAGGA Gene GeneID:514771|GPATCH3:NM_001098972:164_cdna Constitutive 0 NULL GeneID:514771 2 GENE GPATCH3 MGC152362 G patch domain containing 3 EMBV3_28678 CACAGAACTGAACGCTTAAGTTTGGCCGTGACCTACTCCAGGTAACCAACTCAGTCCGTT Gene BVT0102_373371 + 1 EMBV3_38094 GK000004.2:113105072-113127505 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26835 TGAAGGAGCTGATTGCAAGAGAGATCATCCATGACCAGTAGACATCTGCCCACATCCCGG Gene GeneID:614508|ACADL:NM_001076936:44_cdna Constitutive 0 NULL GeneID:614508 2 GENE ACADL MGC151674 acyl-Coenzyme A dehydrogenase, long chain EMBV3_37680 GGTCAACAGTCTCTATGGCCTCATTGCGGTTATCTTCACCAAGGGTTCTGACTCCCTCTC Gene GeneID:788864|LOC788864:XM_002693309:152_cdna Constitutive 0 NULL GeneID:788864 15 GENE LOC788864 NULL similar to 51H5 olfactory receptor protein EMBV3_10036 CCGGCTATTGTGGCGTTAGTGTACAATGTGTTGAAGGCGTTTATGGAAATGAACAGCACC Gene GeneID:533617|PPP2R5E:NM_001083468:157_cdna Constitutive 1 NULL GeneID:533617 10 GENE PPP2R5E MGC143207 protein phosphatase 2, regulatory subunit B', epsilon isoform EMBV3_27603 TATCCCACGGGAAATTGACCGGATAGCAGGAGACAAGGACACCGCCATTGTTATCACTCT Gene GeneID:782358|LOC782358:XM_002692997:173_cdna Constitutive 0 NULL GeneID:782358 15 GENE LOC782358 NULL similar to Protein FAM55A EMBV3_41334 GTACGGAGACACCTTCAAAGCTCAGAGGAATGGAGGGATGGCAAAGTCACATGGAGCAAG Gene GeneID:281766|FCGR3:NM_001077402:189_cdna UTR3_Alt 2 NULL GeneID:281766 3 GENE FCGR3 CD16 FCGR3@ FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a) EMBV3_15155 GGGAGATCAAACAGAACGCCCGGACTCTCATGAACTTACACAATAATGAGGCAGGCCGGA Gene GeneID:533782|WNT7A:XM_002697130:62_cdna Constitutive 0 NULL GeneID:533782 22 GENE WNT7A NULL wingless-type MMTV integration site family, member 7A EMBV3_29472 GGCAGCCTCCACAGAGAAGCAGAAGGAATTGGAAGATAAAGTGACGAGTCCAGAGAAAGC Gene GeneID:787895|LOC787895:XM_002686079:353_cdna Constitutive 0 NULL GeneID:787895 3 GENE LOC787895 NULL similar to cAMP-regulated phosphoprotein 19 EMBV3_26736 TGAGACATGTAGGGAGTTGGAAACCAAGCTGGATGACAATAGGGTATGGTTCAATGTGGG Gene GeneID:100141053|LOC100141053:XR_084066:632_cdna Constitutive 0 NULL GeneID:100141053 25 PSEUDO LOC100141053 NULL similar to tigger transposable element derived 7 EMBV3_26198 TGGAGGGTGACCGGGGATGCACGGTACCAGAGGGGTGGGCAGGCTGTGCTGGAGAACGTG Variant GeneID:516214|RENBP:NM_001046223:61_cdna 344^568 2 EMBV3_19541 GeneID:516214 X GENE RENBP MGC137226 renin binding protein EMBV3_23287 GTAGCTTCCTGGGATTGAAAAGATTACTTGTGATCTGAGTAGTGTTCTCAGCAGCACTAG Gene BVV0102_352595 + 0 NULL GK000026.2:1091950-2063812 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37380 CTCCCTCGAAGGATGCTCACTAGACCAGATGGAAGAATAGAGTGTGGCTCTAAGCTAGAA Gene BVV0102_383893 - 1 EMBV3_12285 GK000016.2:22478780-22495735 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071642 1 XLOC_043412 NonCoding TCONS_00071642 XLOC_043412 NonCoding NonCoding - 16:22480842-22484970 - TSS53486 4128 1 TCONS_00071642_3 112 0.133236434108527 1 0 0 0 0 0 0 0 0 1.7910386662534e-07 0 6.97709987775489e-05 0.000291139133276771 4.33103200467759e-06 1.39015683531329e-06 0 0 0.00118365694401999 0.000422295456104941 0.00010940790090129 0 1.74210956518428e-06 7.35399354718092e-07 0.000221110189417546 0.000822287132343921 0.000503589635490203 0 4.26688439040288e-05 1.84517938946212e-05 0.000241990666841633 0.00014523838392668 5.24324285054858e-05 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 3e-47 196 82.44 0.0484496124031008 NM_016052.3 RRP15 Homo sapiens ribosomal RNA processing 15 homolog (S. cerevisiae) (RRP15), mRNA. 0.0 652 75.36 0.245397286821705 0 noncoding GCTAGGGAGAATATTCTCAGTATTAGCATAGTTTAGAATTACTTGTTTTTTTGTTTTTAGGCTTTGCAATCTCATGAAGTTATAGACTGACAGTAACTTAGAATCATTACAGTAGTTTAGTACTTTAAAATACTGAATTTTTTAAGTTACTTAGACTTCGACTAGATCAGGTATTATTCTACTCATTACAAAAATATATCTGGGAAATACGTTGGATGGACTAGTCTGAAGGCTCACTGTCAGTACTTATAACCTGAAATGGCTCTGCAGGAAGTTGCAGAATATTGGTTGACGGGAAAGTCCAGTCCTTCTATAATAAGTGGGTGGAGGGAATGTTTAAATTGTGGAAAACCGCTTAGGACTTTTCAGTCACTGTGTTTTTGCACATGTGAACGTACTTACTATTCAGCGGCTACCAACTAACCTAGTCTGTAGCCGCCCATGCTGGTCTTGAGGGCCATGAAGAACTGAACCATGAGGCCATCTAATTACAGTTTATAGACACCCAAAGATGCCCCTGTCAAACATACAACAGCAGAGAAGTCCTGAGGTTGACGTGTGAGCAGGAGCATGGACAAACTGAAGACAAACGGTGTTGCTGAGGGGTGAAAGGAGTAATAAGGAAACGCCTGCAGAAGACTTCATAAGACTTAAATATTTATTTAAAAGAGATAAGAGGAGCTCAAATAAGTTGACACTTTGGCGTCTTCTGCATAATTTTTTTCCTCTTTCTATATATATTTTCCTCTATCTCTCTATATACTTATTTTTGTTACAGATTTTTATGAATATATGTGTTGAAGGAGTCATAAGTGAAATGGGATGGGAGTTTTATTTTTTCAGTCTTTTTAAATGCCCACAGAGGACCATTAGTATGCTTAGTATATTATTATTAATACATTCATGCCACATGAATCTCACTTTTAAAACAAACATTTGAAGAAATCAGTAAGTATTTTTTGATATTTGTAATTTCTTAAGGAAGTGTGTGTGTGTGTTGGGGGGGATGGAGTGTGTGTCTTAATCCAGGCTGCTACATCAGATACCGTAGACTGGGTGGCAAAAACAACAAACAGTTATTTCGTGGTTCTGGAGGTTGGAAAGTCCAGGATCAAGGTGCTGGCAGATCTGATGTCTGATGAGCACCCTCCTCCTGGTTTGTCAACAGCTGACCACTTGCTGTGTCTTTACTTGAGGGAGAGAGATTGTCTTTCTCAGTGTTTCTTACAAGGGCACCTCCCTCATGACCCTGTTAGTTACCTTCTAAAGGACTCCACCTCCGATATTATCATATCAGGAATAGAGAGCTTCAACATAGGAATTGGAAAATGCATTGTGGGGGAAGATACAAAATTCCAGTCCATAGCAATGTATAAAATAGCAAACGGTACATTTGTACATAGACATGAAAGAACTTTAGCTGCCCTTGTTCTTCTTAACTTAAATTTTCTAATATTTAAATTTCAATAGAATTAGAAAGTTAAGTTTATCTGGCATTAATTGAGTACCTGTTCCAAGAACTGTGCTAGAATTATTTGAGTGATGATATTGTTTATGCAAAATAAGGAATAATTTTACTCCTGTAAAAAAAAATCAAACCTCCTCTTCCTTTCTAAAGTTGACTTCCTGTAGTAAGTGCCCACTGTGTGATTTGAATCTTGCCGCAGTTTGGATTACCAGTGATAACTTGAAATAAATCAGTTACCTACCATGACTTAAAAAATACTTGTTAAAAAAATAACCTTTTAAAGATTATAGTGGATGTTTCACAGATTAAAGATTCAGATTAAATTGCACATTAAAAGTCTATTACAGTAGAATTGAACAATAACTGTACAGAAACAGAGAGTCCTGGAATAACGAAGCATGTCTGTACTAAATAGATTAGGTCTGTAAATAGATTAATTTGTCAGTACACTATTGATGTTAAGTTCATTTTTACTTGGAAACAATTTTCAGTTGAGGGAAGCAGAGTTCATAACTGCTCTTTCCTTAAATTCATCTGTTAAGATCAATGGGACTAGTGTTTATCTCCACTCCGTGCATCAGTGATAGGTAGAGAGTCTGTTAAGCTCTGCAGAAACAGTATGAAGACTGTTTGAGGTGAATTGGCAGTTAGAACAAATTTTGGAAATAGAGAGGACGCATCCTTGCCTACAGAAAGGAATCTGTGATTTTGGGCCAGCTGGATAGATGAATCTTAACTACTTCAGTGAAGTTAGGCCCCTAGTGAATTTTTCCTTTGGGTGTGCTTTTCTGAAACTTGACTAAAAATGTCAATCATGAGGGGCTTCCCAGGTGGTGCTAGTGGTGAGGAATCCACCTGCCGATGCAGGAGACGCAAGAAATGTGGATTTGATTCCCTGGGTTGGTAGGGTCCCCTGGTGGAGGAAATGGCAACTGCAGTATTCTTAGCTGAAGAATTCCATGGATGAGAGGAGCCTGGTGGGCTACAGTCTGTGGGGGTCACAAAGAGTTAGACATGACAGCGCACACACCCATCATCTATAAAACTGATGCTTCAAAAATAAGTCATAAGAATCCTTGAACACATTGGCAAGTAAAACTGTGTCTGAGATAGGTGACAAGATGTTTAGAATAATGACTGGTGGCAAGTCCTAAGAGTTGTAATGAACTAATCCAAACTCTGTAGATTGAAAAGATATCTTCCAGCAATTCTTAAACAATTTTAGGTCCTCTAAAGGATGTTTTCTAGCTTAGAGCCACACACTATTCTTCCATCTGGTCTAGTGAGCATCCTTCGAGGGAGTTTTGACTTCAGGCTTTTTATGGAGGTGTGTGAAGAACCTTCTGTACTCAGATGAGTTGTACTCAGAGACAGAGTTACAAAGTATGTTTTGTTAACAATATCTGGCCCAACATTGCTCACCTCACTCACTCCCCCAACCCCACTATAGCAGGAGTATGTATTTCTGTTAATGCTGTTTGGTTTTCATTGAGTCGTTGAACAAGAGTATATGCTAGAGAAGTGGGTTTAATTTCTTACAGTCGTAGTCCCTCCATCAGTACTGCCCAGTAGCACTTTGTGTGGTGATGGGAGTGTATCTCCATTGCCCAATGTGGGAGTCCAAGTGGCTGTTGAGCATCTCTTTATTTAAAAGCTGCGTGTGGCTAGTGGTAATATGTCTATCTGTGAACAGATTAAAGTTCCAGAGCATATATTTAGTCTAATAAAACATCAGCCAATTTTGGAATCATCAGTCTACTTTGAATTCTCCCATAAACTTTGATAGATACAATCTATGTACATACAAATACTGGTGTGATTTTATTGACTAAGTTATGGTTGATGTCTTTTTCACTACTTGTATTTTTTAAAGAGATGTGTTAAGTTGCTTTGTAATTACTTCCTGAGGTGTAACTATTATCCTTACATGTTAGGCCACTGTGCGTACCAAACAGTATGTGAGCTTTTAGTATTATCACCTGTGGCTTTCAGAATGAACACACTGAACTTGAAGTCTCGTGGCTGTGTGCTGAAAGAAGAGGTGTTAGGTGTGTGGTACGCAAAAAAGGACATACTGAGAACTGCAGGAGCAGTGGGTAGCGGGTACCATCTAAGCCAGTGTTCCAGTGCTGGGGACTTTGGTCAGGAGCCTCCTTAGTTTGGGGGTCTCCGGAGGAAGTGCCTTCCGTGGCAGGGCTCCCGCGGTGTCCGGCAGCTCTGATCTGCGCCAGCACACACTTGACATCCTGCCCGAGCAAATGTAGCTTGCAGATTGGGGCAAAAAAAAAAAACAAAAAAAAACAACAGAAAACAAAGTACACCATGAGCATTATTAGCACAGCCAGTTTAAAATGATGAGGTGTTAACCACATTTGTATAAATAACAGTTTCTCTAACCCCTGAATCATTATCCTGCATCTTTAATGCAATCGGTTCATAAACAACAAAGCAGGAACACCAAATTTGTGTGGGGTCAGGACCAACTGGGGCTCTGAATGGAGAGACAGCTGAGAGTGTGTCCTTTGCGTGGGTGGCCTCGCAGCTGTTGATTCACCCCGGAGCTACTAGACAGTTGCCTCTGCGCACTCACAGAACCAGCTTCAGTCTTAGGTAAAAATGGATCCCCTCCCCTGGGATGGACATAAACAATGGGTTGACAT TCONS_00066818 TCONS_00066825 . 3' 379 TCONS_00066818 TCONS_00066825 . 3' 4506 EMBV3_27733 CATGCTCACTGAGCTCCTCCTGGGTGTTATAAACACACTAGACTAATTAAGACCATCTCC Gene GeneID:539505|ZNF483:NM_001105423:8_cdna UTR3_Alt 1 NULL GeneID:539505 8 GENE ZNF483 MGC157037 zinc finger protein 483 EMBV3_04312 TACTCCAGTTGCATTTCTCAGACAATAAAGTGGTGCATCCATGCTACCTCCTACTTTGTC Gene GeneID:539923|ZNF644:NM_001082613:183_cdna UTR3_Alt 2 NULL GeneID:539923 3 GENE ZNF644 MGC152168 zinc finger protein 644 EMBV3_41084 AGGAATTATTTTGAAAACACTGATATTCTTGACGGCATGAACTGGGTCTGCAAAAATGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34684 CTCTCTGACATTGCACAGGAAATTGGAAAGGTGATTTGGACTCTTGGGATCTGCTTATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25068 TTTGAGCTTGGTTCCCTGGGCTGCAGCCCTGCTCCTTCCCATTGTTCATGTTCTTTGGTA Variant GeneID:100125942|APR3:NM_001105505:5_cdna 81^448 1 EMBV3_03490 GeneID:100125942 11 GENE APR3 MGC148874 apoptosis related protein 3 EMBV3_43022 CAACATCATGGGGGGCAAGGAGCAGAATTCACCAGCTGCTGTCAGTGAATGGTGTGAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22101 AGTCCCTGGAGGCCAAAGTGGCAGTGTTCGGTGATTTCAGTCCTGAGGTGGCAGAGACAT Gene GeneID:529791|TTC23:NM_001046306:38_cdna Constitutive 0 NULL GeneID:529791 21 GENE TTC23 MGC137669 tetratricopeptide repeat domain 23 EMBV3_03135 TTCCCAGCCTCCCAGCAACTTCCTAGCCCATAAGCAAGCACAAAGATGAGGCAGAGATCT Gene GeneID:519736|RANBP10:NM_001098125:273_cdna UTR3_Alt 2 NULL GeneID:519736 18 GENE RANBP10 MGC143268 RAN binding protein 10 EMBV3_07798 GCATCTGCTTCCCAAGATTGACCCCAAACATATACTGACTGCCACAGCAATCTCACAGGC Gene GeneID:286871|LOC286871:NM_174797:136_cdna Constitutive 0 NULL GeneID:286871 21 GENE LOC286871 NULL uterine milk protein EMBV3_13397 TGACAGGGTTCTGAGAGAGCTCCATAATGAGGCAGAGAAAAATGTCAGGTCAAGGGAGGC Gene GeneID:510305|TMEM45B:NM_001034375:155_cdna Constitutive 0 NULL GeneID:510305 29 GENE TMEM45B MGC127189 transmembrane protein 45B EMBV3_10233 CACAAGGACTTGATGGAAGCCATTTCCAAAGACAACATTCTTTTTCTGCAGGAGCAGGAG Gene GeneID:525702|LOC525702:XM_002699059:67_cdna Constitutive 0 NULL GeneID:525702 29 GENE LOC525702 NULL similar to ubiquitin specific protease 35 EMBV3_27972 GCAGCTACAGAAGACAAAAGCCAACAACAGCACAAACATAAACCATCCTTGCTACAGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29907 GAAACCAGCAAGCAACTCTGAGATGTTCCCCTCACTCTGGACACTTCTCTGTGTACTGGT Gene GeneID:100336209|LOC100336209:XM_002683974:2_cdna Constitutive 0 NULL GeneID:100336209 Un GENE LOC100336209 NULL hypothetical protein LOC100336209 EMBV3_30510 GTCTTAATGGGAACATATGATGATGGAGCAACCAAACTCAATGATGAGGCCCGGCGGCTG Gene GeneID:615690|FAM3C:NM_001099147:70_cdna UTR3_Alt 2 NULL GeneID:615690 4 GENE FAM3C MGC142886 family with sequence similarity 3, member C EMBV3_05901 GGACAGTGCCCTTCAGCCAGACTATCACCCATGAAGACTGTGAGAAAGTGGTTGTACAGA Gene GeneID:508019|CER1:XM_002689577:15_cdna Constitutive 0 NULL GeneID:508019 8 GENE CER1 NULL cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis) EMBV3_19172 TGGGCATACCTGTGCTATGAATGGCGGTGTTTACTTAACTGTTCCAGCTCTCACTGCCTC Gene GeneID:616873|FAM19A4:NM_001076435:65_cdna Constitutive 1 NULL GeneID:616873 22 GENE FAM19A4 NULL family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 EMBV3_31556 TCTTGGCCCCCACAAAACAGTCATTTGGAGTCTTTTCCCAACTCTCCACCATGCATTTGC Gene GeneID:537799|BICC1:XM_002698825:57_cdna UTR3_Alt 2 NULL GeneID:537799 28 GENE BICC1 NULL bicaudal C homolog 1 (Drosophila) EMBV3_04522 TGCGCCGTCAGGCTTCCTTACTGATAATGTCACCTGTCTCCACACCATGCGCTTGCCCAT Gene BVT0101_016502 + 0 NULL GK000025.2:3649598-3650393 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146040 TCONS_00146039 1 XLOC_089002 Coding TCONS_00146039 XLOC_089002 Coding Coding C25H16orf5 25:3649705-3674248 j TSS109296 2702 2 TCONS_00146039_1 208 7 0.890188248716486 0.00125726104435603 0.00138364505093012 0.000741310957449656 0.000206852612619361 0.000580727312145056 2.48255175155475e-08 0.000443781622941558 0.000461745034849597 0.000431772416001154 2.92380131839166e-08 3.65262204767797e-05 2.49496264086385e-08 0.000128090462335623 0.000318830646737826 3.14518848050547e-08 0.00589569728398225 0.000683726766586462 0.00572121461267513 0.000257093544247649 0.000618234372608281 2.16478396117921e-05 0.00123812295493515 0.00206923931528538 0.000563752187459177 0.000490196992239758 0.000536419378185558 0.000842719636154907 0.000925149445101853 0.00112097735309116 0.00215831144317211 XM_005224420.1 CDIP1 PREDICTED: Bos taurus chromosome 25 open reading frame, human C16orf5 (CDIP1), transcript variant X1, mRNA. 0.0 4697 99.96 0.964470762398223 NM_013399.2 CDIP1 Homo sapiens cell death-inducing p53 target 1 (CDIP1), transcript 0.0 1269 83.17 0.453737971872687 TCONS_00146039_1 sp|Q58D45|CDIP1_BOVIN CDIP1_BOVIN Cell death-inducing p53-target protein 1; 5e-144 405 100.00 0.995192307692308 1 coding 0 0 0 0 -1.21154630169908 0.00224907392629588 0.00992030300466955 0.870971615884488 GAGCTGACCTCACGGCCCCGCCCCTCGCCGTGACGCCTCGGGCCTCGGCCCTGCTCCAAAGCCTACCCGCCTCCTTCTGACAGACGCCCGACTGCGAGCTGCGGAGGTGGTCGCTCTTGGTATTGCGGCTGCCGCCGGTGCCGCGGCGACGCTCCCAGAACTCTGCGTGTTCGCCCAGGCCAGCGGTGGAAGGAGCCTCACCTGCCTGTCTCTTCTGAGTACCTGAGATCAGAGGCCCAGGAGAAGCAGCGAAGATGTCAAATGATCCGCCCCCTCCTTATCCTGGGGGTCCCACAGCCCCGCTTCTGGAGGAGAAAAGTGGCGCTCCGCCCACGCCAGGCCGCACTTCCCCAGCTGTGATGCAGCCCCCACCGGGCATGTCGCTGCCCCCTGCAGACATTGGCCCCCCACCCTATGAGCCGCCTGGTCACCCGATGCCCCAGCCCGGCTTCATCCCCCCACACGTGAACGCAGACGGCACCTACATGCCTTCAGGTTTCTACCCTCCTCCGGGTCCCCATCCACCCATGGGCTACTACCCACCGGGGCCCTACCCGCCAGGGCCCTACGCTGGCCCTGGGGGCCACACGGCCACGGTCCTGGTCCCCTCAGGGGCTGCCACCACCGTGACCGTGCTGCAGGGAGAGATCTTCGAGGGTGCGCCCGTGCAGACCGTGTGCCCTCACTGCCAGCAGGCCATCACCACCAAGATCTCCTATGAGATTGGCCTGATGAACTTCGTGCTGGGCTTCTTCTGCTGCTTCATGGGGTGTGACCTGGGCTGCTGCCTGATCCCCTGCCTCATCAACGACTTCAAGGATGTGACACACACGTGCCCCAGCTGCAAGGCCTACATCTACACGTACAAGCGCCTGTGCTGACGGGCTGGGCCTGGACTCCCCGCTGTCCGTCTGGCCCCCCATGCTTCGCCCCCCGCACTCAGTGGCTCACCTCCCTGCTCCCACTGGGGGTTGGAAGCCGTTCCACTAGTCCGTCCCCTGGCAGTCTTGTCCTCTTCGCCTTGCCCTTCCCTGAGCATCTGACTCTGGTGGCAAAAATTCTGTTGGATTTCAGGCCAAGGGCCAGTGAGTGGTGGGGGATGGCGCTGAGCTTGCGTGCTGCTGCCGTGCTAGGCATTTGTGATCAAGAAGACAAGAGGGAGTGGTCTCCTCATGTGGTCCTCCCTGCTGGGGTCTCTTCTCCATTTCTGTACCAGGTACAGGTTTGGTCCAGAGTCTCCCTGGGACCAAAAGTAGCCAGAGCCGTGGCTGGTTCCCCAGACCGGGGCCTGCAGTGGGGCCGAGCCCATAGCCACTGTCATTTCTGATCTGTTGGGCTGAGAATGGCGGATGGACCCAGGCAGGCCTGAGTTTGTGGATGCTAGAGGCAGGCACGATGGTCAGAAGCAATGACTCTGGCCCTCAGAACTCAGGAATTCTTAACTGTGCCCAGGAATTACCTGGGGTAAATGGAGGTCAGCACACCTGCAGGCTACGGAGTGAGGGACTGGACCCTAGCTTGCCAAGAAGCGATTCTCCATGGCCCCTGCCCAGCTCCCTTTCAGCCACACCCCGTGAATCCCAGCCTTTGCTGGGGCCAGAAGGAATGCCCAGGAGCCAGGCCATCTGGCTATACCGTGCCCTTGCAGGGTGTGGGCACAGCCTCTGCCTGGAGTGTCCCAGGTGGGACCAGAGATGACAGAGCGGGGATTCCTTGCAGGCACTCTGGGCTGTGTGGTGCACTCTCCACGGGCCCTCCTCCCGGTGCCCACAGGGCCCTGCAGCCTGGCTGGTTCGCCGTCACTGCTCTTGCTCCATCAGCAGGCGCTGCAGCAGGAGCAGCCGTGGCGCTGGACTGGGACAGGCTTGGGACAAGGAAGGAGCAGCCACAAGTGGCAGAGGTGTCCCGGTGGCCACCAGCCCTGCCCTGGGCCTGAGCACACACTGTTTCCTGAAGGGTTTGTCTGTGAACTTGCTCCCATGGACCGCTGTATCCTGCCGCCCCCTCCTGGTCTTGCACAGTCACTGCATGGCCTCCTGTCACTGTGAACCGTGGCCAGTCTCAGTTGATAGTTCCTTATTAAATTGGCCCTTTCACTCCCCCACCCGAGGCCTCTGCTCTCTTGCCTGGCTTCCTTCTTTTGTGAGGGAAAGAGGGTGGGGGGCCTGCAGGTAGTTGGAAGGCAGGGGGTCAAGACCTCAGGGTCTCAGTGCTTCTGCTGAACCCACTACCCAGGGACAATGCTGGTGTCTCAGTCCCTGGTTAAACCCACCAGAGCCCAGCCATGACTGCGCCGTCAGGCTTCCTTACTGATAATGTCACCTGTCTCCACACCATGCGCTTGCCCATGGGGTCTGCAACCTAGAGACCCTTGCCAGCCAGAACTCGGGGTCATCAACCCTGGGGGGAGGTGCCCTCGCTGCCTTGAGCAGGACAGAGCCACCGGGGATGAGGCGTCAGGTCTGCAGGCTGCTGGGGCAGGCAGGCAGCTGGGCCCCCACCCCTCATCTGACTTGTGAAGGTGGGTGGGCTTGGTCAGTTCCTGGAAAGTGTCCCCACCACTTAATTCTTTTTTGGGTAACACTTTCCCAGATTCTCAATATATAGAACAGGTATTAAAAAAAAAGGAAAACTAAAGCACTCTTGAGAACTAGAAAACCGAGGGACCACATGGATGTCCACGTCCCTGAGAGGCGGCTCAC EMBV3_12533 TGCGTGGCAGAGTCGTGGAACCAAAGAGGGCTGTGTCCAGAGAGGATAACAGTGACAAAT Gene BVV0102_188085 + 0 NULL GK000007.2:73798028-73914460 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217703 TCONS_00217708 TCONS_00217693 TCONS_00217704 TCONS_00217694 1 XLOC_131561 Coding TCONS_00217708 XLOC_131561 NonCoding Coding - 7:73823440-73842392 - TSS162057 503 2 0.973563400348267 0.00373779358106294 0.00236179976363116 0.0043895403696689 0.00302829930893249 0.00457810456690029 0.000358780572880665 0.00328653659355648 0.00298946287323912 0.00229303335273235 0.000243328204285487 0 0 0.000716269727861347 0.000239516147940972 0.000436381275339399 0 0 0 0.00463484401793993 0.00890674932269953 0.00276096717820915 0 0 0 0.00442633948381843 0.00287989921709546 0.00727831887068167 0 5.81290290331245e-06 0 XM_005206139.1 HNRNPA1 PREDICTED: Bos taurus heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1), transcript variant X1, mRNA. 3e-80 302 74.31 0.878727634194831 NR_002944.2 HNRNPA1P10 Homo sapiens heterogeneous nuclear ribonucleoprotein A1 pseudogene 10 (HNRNPA1P10), non-coding RNA. 4e-84 315 74.95 0.880715705765408 0 noncoding 1 1 1 1 -0.141860345255237 0.38248283055275 0.0113727869042553 0.852459777528412 TGCTCTCCTGTTTAGTTAGAGGCTCCCAAAGAGGGCCAACAGCTGCGAGGCTCTTCATTAGAGCCTTGAAATTTGAAACAACAGATCAAAGTCTGAGGAGCCATATTGAGCTGTGGGGAACGCTTGCTCGCTGACTGAGGTCAGGAAAGGTCCAAACCCCTAGCATTCCAGGGCTTTGGGCTAGTCCCCTGCCACTGTGGAGGAGGGGGCTGCAGCCGTGGGTGCGAGGCCACACGAGGTGCGTGGCAGAGTCGTGGAACCAAAGAGGGCTGTGTCCAGAGAGGATAACAGTGACAAATATTTTTGCTGGCTGCATTAAAGAAGATACCGAAGAACATCATCCAAGAGGTTCTTTTGAACACTGTGAGAAAACTGAAGTGTCTGAAAGCATGACTGACTGAAGCAGTGGCGAGAAGAAGGCATCTATGTTTTTGTAACTGCTGATGGCCATGACTCCATACTGTCAAAAGAACATGAACAAGGCTTCCTAAGGCCCACCTGAC TCONS_00217694 TCONS_00217703 TCONS_00217693 TCONS_00217704 s 3' 18450 TCONS_00217704 s 5' 0 EMBV3_39755 CCCTCCGCACGTAGAGAGGACAAAGAATGATGAGCAGTATCTTCCCCGAGAACACGAACA Gene BVT0102_075975 + 0 NULL GK000011.2:104939810-105147823 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13588 CTGGCAGCTGTGGAAATTCATCTGTGTACCTTAATGCTCCTCTGCAGTTGCTCAAGTCCA Gene GeneID:515147|TMEM5:NM_001038114:1013_cdna Constitutive 0 NULL GeneID:515147 5 GENE TMEM5 MGC134437 transmembrane protein 5 EMBV3_37134 GAGAAAATTGCAGACTGAAGAGGTTAAATGAGACAGGCCAAATGGCAAACTGAGCCTAGG Gene BVV0101_090297 + 0 NULL GK000015.2:14558702-14640225 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060563 1 XLOC_036772 NonCoding TCONS_00060563 XLOC_036772 NonCoding NonCoding - 15:14599513-14602632 - TSS45263 984 1 TCONS_00060563_1 54 0.40650406504065 2 0.68505452212957 1.38269316332998e-05 0.000204235957249969 3.76179472434295e-05 8.43917081072395e-06 5.01745860985629e-06 0 1.18531106539043e-05 0 8.82027414718087e-05 0 0 0 0 0 0 8.05229549019554e-05 0 2.54988682591818e-05 5.83002181275087e-05 0.000292334749398267 4.93614738326223e-05 1.50826519713769e-05 0 0.000119260705747281 9.15347418588278e-05 7.16002965149619e-05 0 0 0 0 XM_005216047.1 NLRX1 PREDICTED: Bos taurus NLR family member X1 (NLRX1), transcript 4e-44 183 85.90 0.157520325203252 0 noncoding GCTGTAGCTGGCCAGGCAGCTCTGTCCATGGGATTCTCCAGGCAAGAACACTGGCGTGGGTTGCTATGCCCTCCTCCAGGGGATCTTCCTGACCCAGACATTGAACCTGTGTCTCCTGCGGCTCCTGCATTGCCAGCAGAATATTTACCGCTGAGCCACCAAGAAAGCCCCTTCAGGCTAGAACAGGAATGAAAACTGGCATTTTCCTGTGAAAGTAGAGCCAGACTTATAATTTTGTCTGGAGAGGATGAAGCCAACGAACTCCAGTCAAAATTCAAGGAATTCTTAACTTTCCCATATTCAAATGTAACCTAATGTTTCATTAATAAGTTAAAATATATACATATAAACTTTGAAGTTGTTGGGCTGCTTCTTTTAGTAAATAAATGTGCTTAACTGGCAAAACTAACCTAGTTATGTGATATAAACATTTAGAGTAATTTCAAAAATTCAAAACAAAGGTTATTATCATTAAGATACAGAACTGACAGATTTTTAAAGCTTAAAGGGACCTTACAGATGCTCTAGATCAACTCTCCCTTCCCCCTGCCTTATTTCAAAAGATGAGAAAATTGCAGACTGAAGAGGTTAAATGAGACAGGCCAAATGACAAACTGAGCCTAGGACTACAGAGCCTGAGCCTCCTGACATCCAGTACTTTCTTTCTAACAAGACTATGCTGCCTCCTGTGGTTCCAAATCCTCCCTTGGATGAGATTATTTCAGTTGTCTCATTTGTTTTCTTTACAATCTATCTATCCTGAGCCATAGTTGCCATTTGTAACTTTCCCATAAAATTGTAATTTTCCAATCTGTTTTGTGAATGATTTTACAGCTGAGTGTAAATCCCCCAGGCTTCTAAATTTCATTGCAGGCAGATTCTTTACCTTCCGAGCCACGAGGGAAGACCTAAATTTCAGAGCAATAAACCTAAAGAGCACCTGAAACAAACTCACACTACTGGTACATAATCAAATGCACAATC TCONS_00058335 r 5' 215 TCONS_00058335 r 5' 215 EMBV3_19570 GAAGTATGCAGCTACCTTGGGTGTGGAGATCCATCCTCTTGTGTTCCATACCAACAGAGG Gene GeneID:781059|LOC781059:XR_083783:352_cdna Constitutive 0 NULL GeneID:781059 10 PSEUDO LOC781059 NULL similar to GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like protein TC4) (Androgen receptor-associated protein 24) EMBV3_32166 TTTCTGCCCCCTTGATCTCCAGCTCACCAGTGAAGGAATCCCACGAGTATGAAGAGCCAT Gene GeneID:533321|FRMD3:NM_001046348:43_cdna Constitutive 0 NULL GeneID:533321 8 GENE FRMD3 MGC137410 MGC148566 FERM domain containing 3 EMBV3_34820 AGCAGTTACCACTCATGTGTGTCTGTCAGGGGTTTATATCTTGTGTGTGTATATGCAGGC Gene GeneID:540258|RBM25:XM_002690998:301_cdna Constitutive 1 NULL GeneID:540258 10 GENE RBM25 NULL RNA binding motif protein 25 EMBV3_37736 CGACTGCCGTGAGCAGATGGGTGAACGCGAAAAATCAACACCCATGGATTTTATCTGACT Gene BVT0102_067836 + 0 NULL GK000028.2:13615889-13651047 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159083 TCONS_00159080 TCONS_00159081 TCONS_00159084 TCONS_00159082 1 XLOC_097346 Coding TCONS_00159083 XLOC_097346 Coding Coding CSGALNACT2 28:13628331-13656876 j TSS119289 1572 1 TCONS_00159083_3 379 6 0.945137331838565 0.00274108722009466 0.00325270201566395 0.00543361017438344 0.00411801220597873 0.00333510225100315 0.00206049973737548 0.00378379876660838 0.00494306148914035 0.00645312317526365 0.000276335714687236 0.00113685786142969 0.000331110943423022 0.00050266575856808 0.00237432760869107 0.00119361413376023 0.00012756881976239 0.00183317700369237 8.18933640636737e-05 0.00503557541457714 0.003316287382348 0.000595029377852583 6.36523230331055e-88 0.00068939075257622 5.00901579042592e-54 0.00425964251380405 0.00509714090077811 0.00397202015212113 0.000131820632598487 3.56163347786848e-05 7.42820214210054e-05 XM_005226253.1 CSGALNACT2 PREDICTED: Bos taurus chondroitin sulfate N-acetylgalactosaminyltransferase 2 (CSGALNACT2), transcript 0.0 2504 100.00 0.882315521628499 NM_018590.4 CSGALNACT2 Homo sapiens chondroitin sulfate N-acetylgalactosaminyltransferase 2 (CSGALNACT2), mRNA. 0.0 1674 86.85 0.879134860050891 TCONS_00159083_3 sp|Q8N6G5|CGAT2_HUMAN CGAT2_HUMAN Chondroitin sulfate N-acetylgalactosaminyltransferase 2; 0.0 598 95.11 0.860158311345646 1 coding 0 0 0 0 -0.318642309742506 0.14032405377381 -0.0268297322312599 0.607324481070877 CCCATTTCCTCACGCGCGCCGGAAGTGGAGGTCGGCGGCGCGGCGGCGCGCCCCGAGGGTGGGAGGTGAGGAGGTGGCGGCCTCAGAGAGCCGGGCGCCGCCCAGCAGTGCCTGCGGCTGGGGAGCTGGCGGCAGGGCAGCGGCTGCCGTGAGCAGATGGGTGAACGCGAAAAATCAACACCCATGGATTTTATCTGACTGTGTAGATCAGGTTTTTTTATTCTGGATATCATGGTAACAGTATTGGGAAAATGCATTATTTCTCATGTCTGCAAGTAGTCTTCACTGCTGAAGGAAGCAATTTTTTAAGCTACAGCCAAATTCATTTTGATACTTTTTATGGAAATCTTGATTTTGTTTTTACTTTTTTATAACCTTTTGCAAAAGGTATTAACAAGCAAAGAGCTCATCTCATTAGGCAAGTCCAGATTAACAAGAATGCCTAGAAGAGGGTTGATTCTTCAGACCCGGACCCACTGGCTACTGCTGGGTCTTGCTTTACTCTGCAGTTTGATATTATTTTTATACCTTCTGGAATGTGCCCCCCAGACTGATGGAAATGCATCTCTTCCTGGTATCATTGGGGAAAATTACGGTAAAGAGTATTATCAAGCCCTCCTACAGGAGCAAGAAGAACATTATCAAACCAGAGCAACCAGTCTGAAACGCCAAATTGCCCAACTGAAACAAGAACTACAAGAAATGAGTGAGAAGATGAGATCTTTACAAGAGAGAAAGAATGTAGGGGCTAATGGCATAAGCTATCAAGGCAACAAAGAACAAGCACCTAGTGATCTTTTAGAGTTTCTTCATTCACAGATTGACAAAGCTGAAGTTAGCATAGGAGCCAAACTACCTAGTGAGTATGGAGTCATTCCCTTTGAAAGTTTTACCTTAATGAAGGTATTCCAGTTGGAAATGGGTCTCACTCGCCATCCTGAGGAAAAGCCAGTTAGAAAAGATAAGCGAGATGAATTGGTAGAAGTTATTGAAGCTGGCTTGGAGGTCATTAATAATCCTGATGAAGATGATGAACAGGAAGATGAGGATGGTCCCCTTGGAGAGAAACTGATATTTAATGAAAATGACTTCGTAGAAGGTTATTATCGCACTGAGAAAGATAAGGGCACCCAGTATGAACTCTTTTTTAAGAAAGCAGACCTTATGGAATACAGACACGTGACTCTCTTCCGCCCTTTTGGACCTCTCATGAAAGTGAAGAGTGAGATGATTGACATTACTAGATCAGTTATTAATATCATCGTGCCACTTGCTGGAAGAACTGAGGCATTTGCACAGTTTATGCAGAACTTCAGGGATGTATGTATTCATCAGGACAAGAGAATTCATCTCACAGTGGTGTATTTTGGTAAAGAAGGACTTTCTAAAGTCAAGTCTATCCTAGAATCTGTCGCAAGTTGTGGCCACTCCCTAAGAGTCCAGCTTTGGCCGGCCTTTCTTCTCGAGTCGTTCAACTAACATTCATTGAGTCCCACCGACTATGTTCCAGATCACCTACTAAGTGCCAGTGACTGATGTTAGTATCACAGAAGTTGCATTAATCAAGACTCC EMBV3_27082 ACCCCAGCCAGCTGCAGTTCCTTTCATGGCCACTTATTTACTCATCCGCTGGTTGAGTGA Gene GeneID:513034|CLDN19:NM_001101084:146_cdna Constitutive 3 NULL GeneID:513034 3 GENE CLDN19 NULL claudin 19 EMBV3_35440 ATTCATGGTGTATGTGTCAGGTTCCGTCTTTCTCATGCCTTCCCTTGCTGCTGTCCTTGC Gene GeneID:530354|LOC530354:XM_002693166:110_cdna Constitutive 0 NULL GeneID:530354 15 GENE LOC530354 NULL similar to olfactory receptor EMBV3_24193 TGGCCAGTATAGTGGTAGCAGTTGGACTGACCATTGCTGCTGCAGGATTTGCAGGTCGTT Gene GeneID:100297751|LOC100297751:XM_002687895:98_cdna Constitutive 0 NULL GeneID:100297751 5 GENE LOC100297751 NULL similar to translocase of the inner mitochondrial membrane 14 EMBV3_27377 TGCCCCCAGACCTCAAAGACCTTGGCGACCGGCATATGCAGCAGTGCTGTGGCAACAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29807 AGAGTCTTTCTGCTCCAGGGTCACAGCAATTTCCAGAGCATGCCTCCAGGTCTCTGCCTA Gene BVT0102_414302 + 0 NULL GK000003.2:20806132-20811442 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169035 1 XLOC_103259 NonCoding TCONS_00169035 XLOC_103259 NonCoding NonCoding - 3:20807303-20810386 - TSS126654 2657 2 TCONS_00169035_1 120 0.423033496424539 2 0.13854639844257 1.28017328457395e-06 0 0 9.47321164436343e-11 0 0 1.27279132465836e-10 0 2.67260435149665e-05 8.99480352916834e-05 2.81263055162152e-05 2.44061646972773e-05 0.000129619893840242 0.000192532242291396 0.000305999113927169 8.30088277324619e-05 0 0 0 6.76650764893417e-07 1.21870778207593e-05 2.79287348944676e-06 1.03870028527068e-05 7.74364717581557e-05 7.82289311900306e-06 0 0 1.37822282592849e-10 0.00012568394952767 0.000119809711969364 XM_592211.6 EGFR PREDICTED: Bos taurus epidermal growth factor receptor (EGFR), 1e-144 518 93.60 0.129092961987204 0 noncoding 0 0 0 0 -0.0688235178386016 0.535584015643997 0.0533469730431053 0.29415495879976 GTGAGGGGGGGTGAAAGTGCAAGGCCTCTAATGGGCAGCAGAGTAGGGGCAAGGTCTTGCACAGCCCTTCTCCACAGATCTCAGACACAAAGGCTGTATAGGTCTTACCTTAACCTTCTCAGTCATCTATCTGAACTTGGACGAGGCCAAGGCCTGTTTTCTGTTTTGTCTCAGCACAGTGACAGGTTAAAAGCATTTGTTATAGAAGTCAGTGAGAATACAGAGGAGGGAAAAGGAAAGATACTTTTTTTTTTCTTCTTAAGCTTTAATTCAGTTCAGTTCAGTTCAGTTGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAAACTCATGTCCATTGAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCCCCAGTGCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTTTTCGCATGAGGTGGCCAAAGTATTGGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAACACTCAGGACTGATTTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTTTCTTTTTTCTTTTTTCCAAGGGACTTTCAAGAGTCTTTCTGCTCCAGGGTCACAGCAATTTCCAGAGCATGCCTCCAGGTCTCTGCCTAGACCCTGATTACCTGCTTAAGCCCTCAATGCAGGGTGGATCTAGGACCTGTGTCAGTACTCTGAGTTAAAAAGTAGTAACTTTTAAGGTGTGGTGGGGCACCACCTTTGCACTTATCATCTCATCCATCCTCATGGTAAAACTTTCAGGGACAAACAGACATAGGGCTTTCTGAGGTACAGCTTGAGGCTCTCAGTTGAGTGACTTGATTTGCTGGCGTATTGAGTGCAGCACTTTCACAGTATCATCTTTTGGGATTTGAAATAGCTCAGCTGGAATTCTATCACCTCCACTAAGCTAGTGATGCTTAGTGTAGTGATGTTTGTAGTGATGCTTCCTAAGGCCCACTTGACTTAGCACTCCAGGATGTTTGGCTCGAGGTTATACAACAACAACAAAAGGAAAGATCCTAACTTGAATAATCTGGTTCCAGAATTCATGCTCTCAATTTCCAACAAGAAGTGTAACTGATTAGTCCATTAGCTCCCTGCAGGCAAATCTATATGGGAAGCCAAACTACAATCAGAAAGATTGGAAGAGCCTGGAGGCAGATGACTTCAGTGGCTGCCATTACTCAACCAGGGTACCATTTCACTCTAAAGGCTGCCTCATTACAAGAACTGGAAATGCTCACTAGAGAGTCAGGGTACGTCTGCCTTGGAGGGTATTTTGATGATTGCAACCCCCTTGTTCCCTCCTCTCCTCCCTCATTTCCAGCCCTCTTCTCTAATAAGGTTGTGGTAAGAAGTTACTTGGTTGTAATCATAGTCTTCTACTCTACTACCAGATAAGAAATCCCAGAGATCACTGAATAGAAAGGCCAAATAAAGATGTTCAAACCACAGTTAATTGAATCCATTTAAAACATGAAACAAAGAGCAAGGGGAAATGAGGAGCAAGGGGAAATTAACATACATATTAATAGAATAGGGTTCAATGATGGGGGAAGTACAACACTGTATCCAATGCTGAGTTACAGTTTTCTGTCCTGTCTTGCTGTGTGGCCTCAGCCTTCCCCGTTGATGCTGCAGTTAAAAAGGACTAGAGATGAGAGTGGACAAGGGGACTCAGCAGACAGAAGGTGCTTGATCCTAATTTAAGCTTGTTCAGTCAAAGAGATACAGGGGCAAGTGTGCCTGGCCGTTATTGTAATTCACCAGTAACTTGCTGAGTAGCTATGGATCTCTCTGTTTAGCATGCAGAGGACATTGGGCAACAGTGGCTGTCACCAGTGGATGGCTGATAGAAGCCATGAATACTGGGCATTTCATGTATCTCATGAATATTTGATATGGTGCTTACTTGGTACTTCTGCCCTTTCATATATCTATATAGGAAGATGCTCTATTTATTTATATTTAACATTTCTTACAGGCTATATTATAACTTTCTACTTGTTATAACTTTCTACTCTTTATATACATTTTAACAGTCAAGTCAGCTGGCAAGTTTGATTCTTTAAGATGATTTCACATTTTTCTGCTCTAATTCTGAAAAATCTGGACCTGCCAACTTGTTCATACCCACCTTTACCCACTGTCTTCTTTGCTCTTTAAATTTTGACTACACTGACTCCCGCTTCCCCAGTTATGAAGCATAGAAGACCTACATTGGGTGAAATAGGCAGTAAATACACCAACTTAGGTTTCTATTTCATTACAAGACTTTCACATAGAAAGATTTCACTTTAATCTTTCAGAGATCTTCTCATTTGATCCTTGAATCATTTCTGTAAGAAAGTCAGGAATTCTCAGCAATATTACAATGAGAAAATGGGACTGTGGCAAAGTTAAGATTTTCCATGGGCCATATAACCCAGAATCTCTCTTCCTTTCTCCCTCATTCCCTATCCACCCCACATCTTCTGATTGTCTGGGTAGGGGTGGGGGCTGGTATTATACATGCTTATTTAAGATATTGGAACAATTCAAAACATTAAATGATTATAACAAAAACC TCONS_00172482 r 3' 1057 TCONS_00169033 s 3' 1173 EMBV3_30092 TTGTGAAAGTGCCTGAGATAGGTCTCCCTGTAGGAAATGTGAAAGAAAGGCACAGCAGGC Gene GeneID:782597|PLEKHF2:NM_001098150:100_cdna UTR3_Alt 1 NULL GeneID:782597 14 GENE PLEKHF2 NULL pleckstrin homology domain containing, family F (with FYVE domain) member 2 EMBV3_03300 TTCCTGGAGAAGAAGGGACCCCGAGATCGGCATGTGGAAAAGCTAGATCTAGGAGGCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19326 CTGGTACCTTGCCACACATAGTTTTGTGGACACCCTCTGGTCCTGATCATTTTAGCCAGG Gene GeneID:527553|CRP:NM_001144097:293_cdna UTR3_Alt 1 NULL GeneID:527553 3 GENE CRP NULL C-reactive protein, pentraxin-related EMBV3_34674 CGAAGTGGAGAAGGAGGTTGAGAAAGAAGAGCCGCCGCCTGAGAAGGTATCAAAGCAAGA Gene GeneID:524042|GJA8:XM_002686085:22_cdna Constitutive 0 NULL GeneID:524042 3 GENE GJA8 NULL gap junction protein, alpha 8, 50kDa EMBV3_36419 CCTTTACACTCCGTGGTGCCTAATCCTTATACTCTATTGTCTGAAATTCCTGAACGGGCC Gene BVV0102_101977 - 1 EMBV3_07250 GK000004.2:116060052-116237838 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00022895 TCONS_00220566 TCONS_00118040 TCONS_00238581 TCONS_00210913 TCONS_00174805 TCONS_00170890 TCONS_00023655 TCONS_00206300 TCONS_00171428 TCONS_00174806 TCONS_00188145 TCONS_00091323 TCONS_00118487 TCONS_00252081 TCONS_00125692 TCONS_00040258 TCONS_00250203 TCONS_00133817 TCONS_00002600 TCONS_00110425 TCONS_00123823 TCONS_00246739 TCONS_00031759 TCONS_00137167 TCONS_00248945 TCONS_00174808 TCONS_00174809 TCONS_00000529 TCONS_00174807 TCONS_00132066 TCONS_00103962 TCONS_00232829 30 XLOC_105290 XLOC_013565 XLOC_133883 XLOC_072206 XLOC_145248 XLOC_129423 XLOC_104695 XLOC_103679 XLOC_014322 XLOC_124877 XLOC_103815 XLOC_114188 XLOC_056098 XLOC_072644 XLOC_155022 XLOC_077234 XLOC_024074 XLOC_153146 XLOC_081223 XLOC_000643 XLOC_066329 XLOC_075375 XLOC_151107 XLOC_018004 XLOC_083377 XLOC_151888 XLOC_000141 XLOC_080699 XLOC_062257 XLOC_142312 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_14423 GAAATCCACAAGAGCCCCCTGACATGCCAGGATCCCTGCTCAAGAGGCACCCAGAGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20870 AGAGATAGGAAGAGAAGAAGCAATGAATGGGGTTATTATTCTAATTTTATGAGAAGAAAC Gene BVV0102_366746 + 0 NULL GK000014.2:49275051-49497512 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056579 1 XLOC_034382 NonCoding TCONS_00056579 XLOC_034382 NonCoding NonCoding - 14:49420097-49422488 - TSS42256 2391 4 TCONS_00056579_4 52 0.427017984107068 1 0 0.000964045784337748 0.00130701168193294 0.000596033422253209 0.00022502668101349 0.000128023844924836 2.31887762312233e-05 9.75609940396248e-06 2.22637402037199e-05 0.000151796837955201 0 0 0 1.20003373289184e-06 1.9673758025903e-07 0 0 0 0 0.000553340905476851 0.00232696921422568 0.000614509744509322 0 0 0 0.000917546574994666 0.00136037464080503 0.00128283827599592 0 0 2.51453133798294e-06 XM_005194808.1 LOC101905230 PREDICTED: Bos taurus uncharacterized LOC101905230 (LOC101905230), 1e-74 286 95.51 0.0740276035131744 0 noncoding 0 0 0 0 GGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACCAACTCGATGGACGTGAGTCTGGGTGAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTGATCTGATCTGATCTGAACCCCAATTTCTCTGGTTCTACATATTCTTCTTTACCCGCAATGGCATTTTTTTCCTCAATAAAAAATTTTCTTCCAACGACATACTGTGGGAAGATCCATAGAGTTGGACTTCCCAGGTGGCATTAGTGATAAAGAACCTGCCTGCCAGTGCAGGAGATACAAGAGACCTGGGTTTGATCCTGGGTTGGGAAGATCCCCTGAGTAGGTACACCAGCCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTAGGGGGGCTACAGTCCACAGGGTTGCGAAGAGTCAGACACAACTGAAGAGACAGCACGCACGCATCCATAGGGCCACTGTGGCTTCTCTAGGTTAAGTGAGGGTGGCAATGCTGACCCACATGCATGCCTTTTCTTCCTGCTGCTCTCATACCCCTGACTCTCCACTCTCCTCACCCCAACCCTACATGCAATTTTGAAATATCCTCCAGGGTGCCTGAGGGTGCACAGTCAAGTTTGAAAACCTCTGTCTAGAACAAGAAAAGGCAGCTGTAAGGGAAATTTAAGTCACTGTTGTCAGAAAGAAGGCAGTTACTCTGGTGAGATAGGAGACATGTAGCTCCAGGACCCATGTCTTCTGGCCTGAGCTACAGAGAATGCCTCAAAGCATTTTGTGCACCAGCCTCTAGCACAAACACAACACAAACCTTTAAAGGGCAGCTGAACAGATTTCTGCTTTCCAAAAATCTGTATTTTTTTTTTAAGAGAAAAGGATTTTAATTTTTTATGACTCCAAGAAAATATGTTATCAAAAAAAAATTAGACCTTTAAAGCCTGTTTTTCTGATTTTAAAAACACATTTTAAAAAATGGTGTACTAGAAAACTTTGGTGGTTGTTTTTTTTCTAGAAGGCTGTTACTTTCAACCAGCTCTCCCTCTCTAATCCCAGGCAGGGTTCTCTCCCTTCAGTGGACAGCCAATTTCTGAGGCAAAAGATTGAGCAGAGAGCTCCAGAGCTTTAGGAGCTTCCCAGGTGGCGCTAGTGGCAAAGAACCCACCTGCCAGTGTGGGTGGACGTAAGAGACGCGGGTTCAATCCCTGGGGCAGGAAGATCCCCTGGAGGAGGGCATGGCCACCCACTCCAGGATTCTTGCCTGGAGAATCTCCATGGACAGAGGGCGATAGTCCATAGGGTTGCAAAGAGTCGGACACAACTGAGAGACTTAAGAACAGCACAGAAATGAATGCTATTCATGATAAGTCCTTCTGTCTGCTATGATGTGATTTTTTAAAATTATCATTCATGTACCTTCATTACTTTGATGTTTTTAAATACTTAAAACACAGTATTAGATATGAAGTAATGGTCAAGTTACTTAATTTCAGTGAATTTGTTTCTTCTCATAAAATTAGAATAATAACCCCATTCATTGCTTCTTCTCTTCCTATCTCTTTATTTTGAGAAGGAAACGTTGTTGTTGTTGTTTTTTAAATAAATAGGACAACTAGCTATGTGACCTTGAAAAGACCATCTTTCTCACCATATTTCCATCAGGATTGTACTAGATCTGGGAAGTTCTTTTCAGCTGTGACGCCAAGGCATGATATTTTGTTACCTTTTTTAGCTTCGAAAAATACAAATGTATTATTTTACTGTGCTGGAGATTAGCTGTGGAAGGCTGGTCTCGCTGGGCTAACTTCAAGGTGATGGCAGACCTGTGCTGCTCCTTGGAGCTCTAGGGGAGAATTTGTTACTTGCTTTTTCCATTTTCTAAAGGCTACCTCCTTCCTTGCTTTTGTGTTACTAGGACTTCAAAACCAGTATTAGCTGGTCATGTCCTCACTGCATAACCCTCTGACCTCCTTTTCTACTTTTTTTTTTCCTTTAGTCCCCTTTTATTTTATGTCTTTCAATTGAGGTCATATTCATATAATGCAGAATTAACCATTTTTAATTGAAGTGTAGTTGATTTACAATGTTTCAGGTGTACAGCAAAGTAATTTAATATATATATTCTTGTTCAGGTCTTTTTCCATTATAGTTATTAAAAGATACTAAATATAGTTCACTACACTATACAATAGGTCCTTGTTGTTTAGCTATTTTATATATAGTAGTATGTATCTGTTAATCCCAAATTCCTAATTATCCTTGCCCCGCCCAGGTTTTTTTTTTAATTGAAGTATAGTTGATTTACAATGCTGTATTAATTTTTTCTATATAGCAGAG TCONS_00051909 . 3' 11481 TCONS_00051909 . 3' 13871 EMBV3_32957 ACCAGAAGGCCCACTCTTTCGTCAACCACTACATCAGCGACCCCACCTATTACAACTCCT Gene GeneID:100336619|LOC100336619:XM_002696146:56_cdna Constitutive 0 NULL GeneID:100336619 19 GENE LOC100336619 NULL sidekick 2-like EMBV3_17444 ATCAGGGCTCACACCCGACATGCGGTACACACTGCATCATCCCCAAGTAAGGGGAAACTT Gene GeneID:536093|DHX8:XM_002696034:305_cdna Constitutive 0 NULL GeneID:536093 19 GENE DHX8 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 8 EMBV3_23946 ATATTTTGCTTCGTGATCTAGCAGGTATGTCAGGCCGTGGTAAACAGGGTGGCAAGGCTC Gene GeneID:618147|LOC618147:XM_002697526:261_cdna Constitutive 0 NULL GeneID:618147 23 GENE LOC618147 NULL similar to histone, H2A EMBV3_13098 GGTGGGCTGTCACCATACATGGAAGGTTAATTAGAAGGCTAATATGAAGGCTCAGGTGAG Gene BVT0102_422928 + 1 EMBV3_34278 GK000020.2:22341418-22358696 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24794 GAGCGGAAGATCACCAAGGCCCGGGAGTGGTTCCACCGCACTGTGAAGATTGATTCAGAT Gene GeneID:534228|PRPF6:NM_001046375:1204_cdna Constitutive 0 NULL GeneID:534228 13 GENE PRPF6 MGC127162 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) EMBV3_16292 GCTCCTTTAGCCAAAAAGCTGAAGGGGGCCGTGCTGATGGAATGGTTACTCACCTTGTTA Gene GeneID:505750|LRIG1:XM_002696962:112_cdna Constitutive 0 NULL GeneID:505750 22 GENE LRIG1 NULL leucine-rich repeats and immunoglobulin-like domains 1 EMBV3_12923 GACAACACCAGGCAGCAAGGATCTTTCCAGGTATTTACGAAATTTTTAGTAAGGAAGTTT Variant GeneID:517825|TDG:NM_001083696:1031_cdna 755^837 4 EMBV3_12539 GeneID:517825 5 GENE TDG MGC140185 thymine-DNA glycosylase EMBV3_32277 GCCTGTCTCGTGAACTGCGTTGAGCGCTTCATTGATACAAGCCGGTTCATCGTGAAACGA Gene GeneID:522546|LOC522546:XM_002692624:73_cdna Constitutive 0 NULL GeneID:522546 14 GENE LOC522546 NULL similar to translocase of inner mitochondrial membrane 8 homolog A EMBV3_07954 TGTACCTGAAGACTGGATGCCAAAGCAGACGTTCCCTCACACTCACCTGCTGCTGTTTCA Gene GeneID:532090|LMOD1:NM_001083715:169_cdna Constitutive 0 NULL GeneID:532090 16 GENE LMOD1 MGC151829 leiomodin 1 (smooth muscle) EMBV3_20157 ACTTGGGGGCCACGCAGCTCCCCAAGGTCACCGCCAAGGGCATCTCTAAGAAATGCCTGA Gene GeneID:789735|CCDC74B:XM_002694649:160_cdna Constitutive 0 NULL GeneID:789735 17 GENE CCDC74B NULL coiled-coil domain containing 74B EMBV3_14084 CAACGCCTCCTTCAGCAAGAGAGTCCAGAAGAGCATCTCGCAGAAGAAACTCAAGCTGGA Gene GeneID:533462|SAP30L:XM_002689322:40_cdna Constitutive 1 NULL GeneID:533462 7 GENE SAP30L NULL SAP30-like EMBV3_36297 CCTTGAGGGTAGAGAGATATGACAGTGTAATCCATCTTTGGATTTGCTGCAGCTTCTGGC Gene BVT0102_061917 + 0 NULL GK000002.2:96254477-96296414 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30390 ATAGAAGAAAACATTGTTGGCATATTATGCTTTATTATTTCAAGTAAGGTTAAAAATATT Gene GeneID:509351|LOC509351:XM_002693805:36_cdna Constitutive 1 NULL GeneID:509351 15 GENE LOC509351 NULL hypothetical LOC509351 EMBV3_08810 TCTTCATGCTCAAGTACTTCATGTGCCTGGTAGTGGGCATCACCTCGGGCGTGTGGGTCT Gene GeneID:616913|FZD8:XM_002692075:201_cdna Constitutive 0 NULL GeneID:616913 13 GENE FZD8 NULL frizzled homolog 8 (Drosophila) EMBV3_15169 GTGTAGAGGACCTTCGCTGCAAATACGTCTCCCTCATTTACACCAACTACGAGGCAGGCA Gene GeneID:281806|GSTP1:NM_177516:461_cdna Constitutive 2 NULL GeneID:281806 29 GENE GSTP1 NULL glutathione S-transferase pi 1 EMBV3_29770 TGTAGAGTTCTGGAAGCGAGCAGTCCCAGAGGCGCTGATCCTGGAGAAAGGAAGAAAGAA Gene BVT0102_396933 + 0 NULL GK000007.2:111199616-111396328 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27814 ACCCATGTCCCCTGCATCGACAGGTGGTTTTTATCCACTGAACCACCAGGGAAGTGCATA Gene BVT0102_381577 + 1 EMBV3_07358 GK000002.2:107289223-107298619 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27910 CCCTGAATTTTCTACCCAACTCCCAAATGCCCCAAATCCCCCCAAATTCACCTTACATAC Gene BVT0102_079023 + 0 NULL GK000001.2:83546948-83573148 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004345 TCONS_00004348 TCONS_00004349 1 XLOC_001020 Coding TCONS_00004349 XLOC_001020 Coding Coding ABCF3 1:83563208-83581101 = TSS2179 12477 1 TCONS_00004349_6 709 0.364430552216078 21 0.303822937625755 0.000672159499694076 0.000115311554488818 0.00031541054254083 1.24550291532535e-08 6.74859063512124e-05 0.000100993820599603 0.000126172317996725 6.38486849323166e-09 9.02693293703258e-05 0.000178616881317977 3.58274935804473e-16 2.49690091308544e-05 4.1290060034922e-06 4.3845468790572e-05 2.9663234179138e-09 0.000267453439067943 0.000220853818646694 3.13354384048065e-21 5.46145699199079e-05 1.31853759090157e-06 1.26699275902992e-11 7.32707050691004e-08 0.00105245491743477 0.000213072673059109 0.000332319508104638 0.000161897650633036 0.000222486644332593 5.97764339438445e-08 0.000164568315242675 1.82063122270746e-06 NM_001083457.1 GCN20 Bos taurus ATP-binding cassette, sub-family F (GCN20), member 3 0.0 4381 100.00 0.194598060431193 NM_018358.2 GCN20 Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 3 0.0 3377 89.49 0.20293339745131 TCONS_00004349_6 sp|Q9NUQ8|ABCF3_HUMAN ABCF3_HUMAN ATP-binding cassette sub-family F member 3; 0.0 1437 98.31 0.998589562764457 7 coding 0 0 0 0 0.412092268889084 0.173396326259147 0.0905999767043079 0.460605071144411 CTTACGTCACCGTTTCGCATGCGCTTTGGAAGGAAGGGCGAGCTTTCGGGGCACCGGTAGGAGGCGGGCCTTGACCGGGGTCTCACAGCGACTGCGCGGACGGGAGCCCGACTGGAACATGGCGACTTGCGCTGAAATCCTGCGGAGCGAGTTCCCCGAAATTGACGGACAGGTCTTCGACTACGTGACGGGCGTCTTGCACAGCGGCAGTGCGGACTTCGAGTCTGTGGATGACCTGGTGGAAGCTGTGGGGGAACTGTTGCAGGAGGTGTCCGGGGACAGCAAGGATGACGCGGGCATCAGGGCCGTGTGCCAGCGCATGTACAACACTCTGCGCCTGGCGGAACCACAGACGCAGGGAAACAGCCAGGTGCTGCTAGACGCCCCCATCCAGTTGTCAAAGATAACAGAGAACTACGACTGTGGCACCAAACTTCCAGGTCTGCTAAAGAGGGAACAGTCCTCGACGGTGAATGCAAAGAAGCTAGAGAAAGCTGAGGCTCGACTGAAGGCAAAGCAGGAGAAGCGCTCAGAGAAGGACACACTCAAGACCAGCAGCCCTCTAGTCTTGGAAGAGGCATCAGCCAGCCAGGCAGGCAGCCGAAAGGAAAGTCGGTTGGAATCATCTGGAAAGAACAAATCCTACGATGTGCGAATTGAGAACTTTGATGTGTCTTTTGGAGATAGGGTTCTGCTGGCTGGAGCAGATGTGAACCTAGCATGGGGCCGCCGCTATGGCCTGGTGGGTCGGAATGGGCTAGGGAAGACAACGCTGCTGAAGATGCTGGCCACCAGGAGCCTGCGGGTTCCAGCCCACATTTCCCTGCTGCATGTGGAGCAAGAAGTTGCTGGAGATGACACCCCTGCCCTGCAGAGTGTGCTGGAGAGTGACACGGTGCGAGAAGACCTCCTGCATCGGGAGCGGGAGCTCAACGCCCAGATTGCCGCTGGCAGGGCTGAGGGTTCACAAGCTGCACAGCTGGCAGAAATCTATGCCAAGTTGGAGGAGATCGAGGCTGACAAAGCACCTGCCAGAGCATCAGTCATTCTTGCTGGGCTTGGCTTTACCCCCAAAATGCAGCAGCAGCCCACCCGGGAGTTCTCAGGTGGCTGGAGGATGAGACTGGCCCTGGCCCGGGCTCTATTTGCTAGGCCAGATCTGCTGCTGTTAGATGAACCCACTAACATGCTGGATGTAAGGGCCATCCTGTGGCTGGAGAATTATTTGCAGACGTGGCCCTCCACAATCCTGGTCGTCTCCCACGACCGCAACTTCCTGAATGCCATAGCCACAGACATCATCCACCTGCACAGCCAGCGGCTGGATGGTTACCGAGGAGACTTTGAGACCTTCATCAAGAGCAAGCAGGAGCGACTGCTCAATCAGCAGCGTGAATATGAGGCCCAGCAACAGTATCGCCAGCATATCCAGGTTTTTATTGACCGTTTTCGCTACAATGCCAACAGAGCCTCCCAAGTGCAGAGCAAACTCAAGATGCTGGAGAAACTACCAGAGCTGAAACCTGTGGATAAGGAGCTGGAGGTAGTGATGAAGTTCCCCGATGGATTTGAGAAGTTCTCACCACCAATCCTGCAACTGGATGAGGTGGACTTCTACTACGACCCAAAGCATGTCATATTCAGCCGTCTCTCCGTCTCTGCCGATCTTGAATCCCGCATCTGTGTGGTTGGGGAGAATGGGGCTGGGAAGTCTACCATGCTGAAGTTGCTTATGGGGGACCTGACACCTGTTCGGGGCATCAGACATGCTCACAGGAATCTGAAGATTGGCTATTTCAGCCAGCACCACGTGGAGCAGCTGGACCTGAACGTCAGTGCTGTGGAACTGCTAGCACGCAAGTTCCCTGGACGGCCTGAGGAGGAGTACCGTCACCAACTGGGCCGGTATGGCATCTCTGGAGAACTGGCCGTGCGCCCTGTTGCCAGTTTGTCTGGGGGCCAGAAGAGCAGGGTGGCCTTTGCTCAGATGACCATGCCCTGTCCCAACTTCTACATTCTGGATGAACCCACAAACCACCTGGATATGGAGACCATTGAGGCTCTGGGCCGTGCTCTCAACAACTTCAGGGGTGGTGTGATTCTGGTGTCCCATGACGAGCGCTTCATCCGGTTGGTGTGCCGGGAGCTGTGGGTGTGCGAAGGAGGCGGCGTCACCCGGGTTGAGGGGGGATTTGATCAGTACCGAGCTCTTCTCCAGGAACAGTTCCGCCGTGAGGGCTTCCTCTAGGGCCACGAGGCTGAGGACTGTGCCCAGGACATGGACTGTCTTTCAGACCCCTGGGCCACCATGTAGGCAGCCATCTCCTGCCACGAACTTCCCCCAACTTTGGGGACAGCCTTATTCATAAATCTCTCTTTTTGACTGGAGCATCCTCTGCACAACCCGGGAGCCTCACCTAAGGGTCTTTGAGGACTGGTCCTCCAAGGGGAAGGGAGTGGGGGCGCTGCCCTCCCACTGTCCCCGCTGCAACTGGGCTCTGAGTGGCCACTGTGTAAATTAAATATCCCTGCATCTCCCTTGCTCACTCTGCTGCTCCTGGTGCAGGGCTGCAGTGTTCGCCCATGGTTAAGGAGTGCAGTCTCTGATTTGGCATTTTCCTGTGACATTTGTGTCCGTCGTGTGGAGGAGGCCATGGAAGCATCACTGTTGTCCCTGGGGGGAGATGTCTTCAAAGCCGCTGGGGGTCGACCTTGCAGTGGACCAAGCTTATAATGAAGGGCAGTGTATTCCATCACTGCAGTGCTGTGCTCTCCAGCCAAGGCTTAGCTAAGGGGTCTGGGCTCTTCTGTCTCAGCCCCACTGCTTGAGCGAGTAAGCTGATTCTGCAACCTGGCCTCAGACATGGTTTGCCAACTGCTTTCTCCAGTGATCTCTGGCCCAGCCTCACTCTACTTCTCTGAATTGGACCATTTGGGGCCAAAGAGAAAAGTGAGAAACTGTCCCCATTTTGCTTGAGTGGTTTTGTGTTCCTTATTTTTTCTCTTAACCACATAGGAGAGGCCTGGGAAGTAGGGAATTGAGAATGGGGTCTAAGGCAAAGAAAAAGAACATCTTGGTTTCAAATTAACCAGTGTTTAAATGGGGAGAGGGGGTTGTTTAACAGAAGTAGTATGATTTATAAATATTATTTCCTGGATACTCAGCCACTGTATGTAATTGTCGTGCAGAAGACACTAAAATTGCTTTCCTCTTAATGACCGGAGAAACCAGCATCAACAGAAGGAACTTGTCGGCTTCGTGGAGAATTGTCATCACAAAGTTCAACCAAGGGATCTTAACCCAGCCACTGCGGGTCGTGTGATACAGGTCACTGGGGAGGAGACACCTGTCTGGGGGTAAAGGAGAATAAACCTGGAAGGCTCTGCACCAGTGGACTGCTGCACAGCCAGCAGGAAGGGTCACTAAATCTTCCTGCTTCCTCAGCCCCTGTCTCAGGAGTCCTCAAGATGTGGTGTTCTAGGCATGTCTCTGGCCACATGCATGCTCATGGTTCCAAGGACCACAGGCCCCATCACTCTCTTCCAACCTCAGACCTGCATGTGGGCCAGTTGGGGCCATCCGGGGTAGGGTCTGTGCATCCCTGTTTGTCAGCCCCTTCACCCCTCACCAGCTTGTGGTCCCTGTCTGAGTTTTCCCAATTCTTTAGAGTCCCTGGAAATGCCGCCAAAGCTTCAGTGGCAGAGTGTTTCTTTGGAGGTGGCTCTGTGTGTGGAGAGCAGTGGAATTGGATCTGTGATCAGATCCCAGCACTATTACTGGTAATAGAAGGGCTCACCTATATTAATTAGCTGAGTAGCCATGACAAGTCGACCTTTGTACACCTTCTCGGGGTCTACATAAGCACTCAGAGTGATTCCTCTGTGTCCAGTCTATGATTTGGAGGGCCATCATAAGAAAAAGCAGTACATTTTTTTCTGAGTGACTCCAGAGTAGACAGGTTTGGGTTCAAAGGAAGAAAAAACTTTAACAACTCAAACTGCCTTGTTACATACAGTTCCCGATCTCTGGAACTGTTCAGCCCCATGGCTATCTAAAGAAGGGCTCTTTCAAATAGGAGGCAGCATTAGATGGCCTCTAGGCTGGCTCGCAGTTTTATGATTCTGTTAAATAAGAGCCTGTATGTGTGGCAATACAGACCTACACTGCAGACCTTCAGAAAATTAAGATGAGTTAATTGCAGCAGTTGAGAAAGACCCTACAATAAGTATGTAAGGTGAATTTGGGGGGATTTGGGGCATTTGGGAGTTGGGTAGAAAATTCAGGCAGTGTTAGCCTGCTCTCCCAAGAAACACAGCAGAGAGAAGGGAGGAATCTGACACAGGGAAGCACCCCCTTCTACTCTAGAGAGCCTTTCCAACCTCTGCCCCTGGGAGACTGGTTCTTCCACCAGAGCCTTAACAGTCAGGAGCTGGCCAGGTTGAAAAGCCTCTGTAGTCCTGACCTCCTTGCTTCTGCTGGCCTTATCACACTCCAGTGCCTCAGGCAGCCTCGCTGGTCCCGTGTGGGAGGGGGAATGCAGAGCGATCATAGATCCTTCCATACAAGTCTACACAGCAATTGAAGGTACCAGTCAGTTGTTTATTTCAACATTGGAATTGCTGTCAAGATTTGTGGGATATAGACAACTTTAGGTACGTTCTCACTGGTTTCCAGGCAAATGTAAGCCAAGAAGGGACCATTTACCCTCACTGGCCATTCTCCAGCCTAGTTTGTCATTTAGAACCTAACGTCCTACTAAGGGCTTCCCTGGTAGCTCAGCTGGTAAAGAATCTGCCTACAATGCAGGAGACCTTATTTCAATTCCTGGGTTGGAACAATCCCCTGGAGAAGGGATAGGCTACCCACTCCAGTGTTCTTGGGCTTCCTTGTTAGTTCAGATGGTGAAGAATTTGCCTGCAGTGCGGGAGATCTGGGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCTTGGAGAATCCCCATGGACAGAGGAGCCTGGCAAGCTACAGTCCATGGGGTCATAAAGAGTCAGTCAGAACTGAGCGACTAAGCACAGCACAGCAGCAGCATCCTACCAAGAGCCACCTTCCAGGCCTGGGTCAGGCTCATCCTCAGGTGGCAAACCAAACAACGCCAACATCAGAGCACTATGGCTTGTCACCAGCCTGAGCGTGTAGACTGGATGTCGGAGTCTGGGAAATCACAGGCTAGCAGGGTGGGCCCCAAACCTGGCTGAACCTGGAATGATGGATTCCCCTCAACCCTGCCCACCTCCAGGCGGGCTTCAGTGCACTTTATGTGTCCCTTACTGTAAGCTGCTCGCCATTAGCCTTGTGATTCCCACTTGCCTGGATATCTTTGAAGCCCAAACCCTGGCTTGCTCACATTTGCATCTTCTGTCCCTGTCACAGTTTGGGTTCCCTGGAAAGCAGCTTGAAGAGATTGGAATGTGCAGTGCTCCAGATTGAGCAGAAGGAGAAGTTGAGCTACAATGCAGGCCCAATGAAGGCCTCAGTCAACCCCACATTCTGGAGCTGGCAGAGGTGTTCTGAGTTGAGGCAATGGGTCCAACCGAATTGAACAGTCTGAGTGTTGGCTGCCACTGGGAGGAGCAATGACATTGGAAGAGGACGTTTCATCAGCTGAGGCAGTTACACTTAAGGGGTGACAGCTGAGGACTCGCTGCCATGGGTGTTCAGCACCCAGTGTGCCAAGTCTTTTATTCCTGGAAGCTCATCACAGCAACCACTCCCATGCCCGGCACGTCAAGAAGTGCTCAGTAAAAATGCTTGAGCGGACTTCCTCGGCAGTCCAGCAGTTAAGACTCTGCTGCTACTGCAGGGGATGTGGGTTTGATCCCTTCATGGGGAACTAAGATCTCACATGCAAAAGCTTGAGAAGTGAATATTTGGGGGAAATTGAGAAAAAGTAGGGGATGACATTGGAGAAGGAGAGCTTCCAGCCCTAAAGCCACAGAGTCAGAGCGGCAGAGATAGAGGTGCACAGGCAAGGGCTTGTGGGCTCTGCCAGAATGAGGAAGGGCTCCTTTTTCTGGGCCAAGCCTTGATATGAAAGCTTTGGGACATGATATTATGGAGGTGAGTTTTTGTTTTCAAACGTCTCCTTGTCTTCTTTCAAGAGAATTATTAAGAAAATGACAATCGTTATTGAGCTCTTGTTACATAACTGGCACTGTAGTTGCTTTACCTACACTAAATCCTCACAACCCCCCGCACTGGCACAGTTGTCCCCTTTTTTATAGATGAGGAAATGGAGTTGACACAGTGGGAGGATACAGGATCATCTGGCTCCAGAGAACAGCTCTGAGTGGCCACACTGCCCTACTGCTCAGCTCCTAGGGTGACATGCTGAATAGTGAGGATTTATTAATTCTGTCACTTAAAACTCATCATTAATTGCATGGGATGGGAAGTGGGGGGTTTGAAGATGCTTCTCTCAGGAGAACAAGCTGATGAGTAAGGAATACCTCACACGATGGCTGACACAATCTAAGTGCTCAGTGATTCGTTCATTAAGTGATTCAAAATGTGTGGTATAGTGGGAAAGTCATGCACTGGGATTAGCCCAGCTCTCCCACCGACTGCATGTGTGCTAAGTCACTTCAGTCATGTCCAACTATGCAACCTTATGGGCTGTAGCCTGCCAAGTGCTTCAGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGTCATTTCCTCCTCCAAGGGATCTTCCTGAGCCAGGGATCAAACCTGCTTCTCCTGCATCTCCTGCACTGGCAGGTGGGTTCTTTACCACTAGCACTACCTGGGAAGCCCCACCACTGACTGCATCTTAGGCAAATCAACGTCTCCAGAGTAAATTATCCTTATCCATAAAATGGGCATAATTCAGTTTATCTTGCCCATTTCATGGGTAGGAGAAAGGGTTAAATTAGATAAGTTCCTGTGTAAATGGAATAATTTTTTTTTTAATAAGCTGTAAAATGTCATAGATCCAGAGGGTGTCATTTCATGGGAGGGGTGAGAAGACAGCAGCCTGGAGCCTCCTCTGGAGACAGACTCTCACGAGCACAGACAAGCACTCCAGGCCATCATCAAGATGATGGCCCCAGGAGGGCCACCCCACAGTCCTCATCTGCTAAACCAAGAATCAGAAAGCCTGAATGCAGGAGCACAGCATGAAACTCTGCCTGGAACCCACTGAGTTGCATGGGGAGAGGCAGAAATCACCATGCAATTTCAGCCCATACTAATAGTATGTGTAAGTCATACCCTGTTGGTAATTCTAGGTTTCTCTTTTCTTTTTGTTAAATAAATGGGTAGTTTGGAAGTGACTTCTGCTGCACTGTATAAAGGGAGACCTTTGAAACCCTAAATTAAAATAAATACTTGTCAACCCATGCTGCAGCATTTTTAACACCAAAGAATGCTTTCACAAATGTTCTCTTTCAGTCTTGTCTCTTCAATAATCTTGTTTTATGTGACCCTTGCTGAGTTACTCCCATTTTATAGAACAGAAGCTTGAAGTAGAGAGATGTTACGTGTCTTGCTTAGGTTCAGATACCTCTGTGCCTGCAGAGATGGGGTGGTAACCGAGGGATCCAGGTCTCCAGCCTTCTCACATCTTCCGGATCGGCTGTTCTCAACTTTGCTCTACAGCTATTCATACAGTGGGCGATCTCTTATCATGCATGCCTGTGAGTATGCCCAGGGTCATGTGCCCTCCTGTCCTTTTAGGAAAATATTTTGAACCCGAAATGAGGGGGATCAACTGTGACCCTATTTTAATTTGCTTTAAAGTTGTAAGTTAGGGAGCAAGTTCTGGAGTCAGAACTACATTCAAGTCTGGATCCTATTATGTAATAGCTCTGTGACCTTGTCAAATTAAGCTTCTCTGTGCCTCAGTTTCCTCCTCTATAAAATGAGAGTAATAATCCTTTCAGGACTTCCCAGTGGTTGAGAATCCATCTGCCAATGCAGGGCACAAGGGTTTGGTCCCTGGTCTGGGAAGATCCCACATGTCATGGAGGAACTAAACTTGTGCGCCACAACTACTGAGCCTGTGCTCTAGGGCTCCCAAGCCCCACACTGAGCACACTGAGCCTGTGTGCTGCAGCTACAGAAACTCACGTGCCTAGAGCCTGTGCTCTGCAACTAGAAAAGCCACCTCAGGGAGAAGCCCACGCACCACAATGAAGAGCACTTGCCACAACCAGAGAAAGCCGTGTGCAACAACAAAGACCCAGCACAGCCAAAAATAATTAAAAATTTTTAAAATGGTCCTTACATTGTAGGGTTATGGTGACTATTAAATCAGATAATATAAGCAAAACTCTCATCATGGCATTGCAGGCAGTTTCTTTATTCCTTGAGCCACCAGGGAAGCCCTCCATAATGGTTAGCCATTATGATGATTATTAGTGGCGACCTCCACCACTTTATTGACTTTTATTGAAATGTTGCTTACAGTGTCCTACAGCTAAAATCCACTGTGTTTGGTCATGGTGCTTCAGTCAAAAAGACAGGTACCCATGCCTCCTGTTTTGTGTCCTTGAACCTAGAAGGACCTTTTCTTGGATTCTTCTTCCACTGAATAAATATTTTCTTTGGATTCTTCTGCACATACTCACATGCCCCTCTAGTTCGTTCTGAATGTTCTATATTCAATTTGTTCCCTTACTCAATACTTGGCTCCAGGTTGGTGACTCCCCATCAGTGTAGGAGTCTAGGGGTTTTTATTTTGACTGATTGAGACCTTTGAGCATAGTCATTCTGAAACTCTCACCACCAAGGATTTCATCCTCTTTCTTCTGCATGAACTCTACTGTGCGGTACACTCAACTTGGGAGTAGAGTTATCTTAGTGTAAAACTAGTAAGAGTCAACAAACAATGGTTGAGATGTAGAAGCCATTTAAGAGTTGGCAAATTGTGGTTTGCTGGTGTGTGTGTGTTTCAGGGTTGGGGGCACATTTAAGAACCATCAGGTTGATGAGTGTACATTTAGCCAAGGAAGAACACAAGTGATTTGAAGAGCACGTTAAATATGCTTCAAATCAAGAAGGCCAGAACCCTGCAATGGACAGACCAAGAATTGCTCAGTGGGGGTCCCCAGACCTGCCTGAGAAGAAGCAGGCTCTATCTTGTGGCTCTTCCCTCTGGCAGGTCTTGTCCTTCACAGACATTGAATGTCTTAGTCTGTCAGAGCTTGACACCACAGGCCTCTGAGCTCCATTCACTAACTCCACCACTCCATTCTAACTTTATCTGGTTTCTTTGGCTTGTGACTTAGTTTGCATGACCCTTCTCACCCAGAGAGGATGTACTAACCAGTAAATATGGATTTTCAGGGCCCCTATTGACTGCGTTTCTAGTGGTAAGTTAAAAACTGACACCTGGTTTATACATCAGTCTCTTCTGAGTTTCAGTAGTGTGAGGCAGAAACCCTTGGCTTGATCCAACAATGATGATAATTTATCGGGCACTATGTTCCAAGCTTTATTCTAATCACTTTACATGAATTAACTTGTTTTATCCTCACAACAAACTAATAAGGTGTGGATTATCTGCATTTTATAAGCGAGTAAATGGAAATCCAGAAATGCTTTAAAAAACAAAACTAAATTAAATTTGCCTAGGTCTACCCAGCTCCTGAGTCTCTGAGCTGGGGTTTGCCCCGAGGTCAGAATGGGCCCAATGTCTAACACAGCAGGACACCTGACCATGTTGGCGTTTAGGATCTGAGTGATAAGGAGCAGCTCTGTGCCATGATGACCTCAGCAGGTACTGAGGCCCTAGGGTAGCCACACCTGCCAACCCACCTGGAGCATACCATTGCATTTGGAAAAAATTTTATTTGTGAAACAAACCTAGTTTGTTAAATAATTGTTTTCCCTTTAAAGTTTAATCAAAGACGGGACTTCCTGGTGGTTCAGGGGCTAGGACTCCACTCGCAGTGCAAGGGGCCCAGGTTCAGTCCCTGGTCAGGGAGCTAGATTCCACATGCTGCAACTAAGACCCTGTTCAGCCAAATAAATAAAATATTTTTTTAAACGTAATCAAAGACATAATATGGTACTAATCACAGTTTCTGATAAGCCTTTGGTAATCACACTTGCTGACCTGAGTTATTTCATTCCAGCGCCAAGAAAGAAACACTCTGTTTAATTTAGCTTGGACATCCTTCAGTGACAAATCAAGGTAGACCATACCAGGAAAATAAACAGAAATTAGAACAATTCCTGATACAGGGAGAAGGAGCAACATAGTCTGTCGCAAAGGAACTTTCTTTTTTTACTTACTTTTTTCTTTTTCTTCTTTCTGTATGAAAATCCTTTCCTTGAAATAATCTCTCATAATGTACTCTGTGTATAAGTTAAATAAGCAGGCTGACAATACACAGCCTTGACATACTCCTTTCCCAATTTGGAGCCAGTCTGTTATTCCATGTCCAGTTCTAACTGTTGCCTCTTGACCTGATACAGATTTCTCAGGAGGCAGGTCAGGTAGTCTGGTATTCCCATCTCTTAAAGAATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGTGGTCCACACTTCGCTGTAGTCAATAAAGCAGGAGTAGATGTTTTTCTGGAATTCTCTTGCTTTTTCGATGCTCTGATGGATGTTAGCAATATGATCTCTGATTCCTCTGCCCTTTCTAAATTTAGCTTGAAGTTCATGTACTATTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGTGTGTGAGATGAGTACAATTGTGGGGTAGTTTGAACATTCTTTGGCATTGCCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCCGCTGCTGAGTTTTCCAAATTTGCTGGCATATTGCGTGCAGCACCTTCATAGCATCATCTTTTAGGATTTGAAATAGCTCAACTGGAATTCCATTACCTCCACTAGCTTTGTTCATAGTGATGCTTCCTAAAGCCCACTTAACTTCAAATTCCAGAATGTCTGGCTCTAGGTAGGTGATCACACTATTGTGGTTACCTAGGTCATGAAGACCTTTTTTATACAGTTCTTCTGTGTATTCTTGCCACGTCTTCTTAATATCTAATGCTTCTGTTAGGTCCAAACCATTTCTGTTCTTTATTGTGCCCATCTTTAAGAGATCTGTAGTCTTTCCCATTCTATTGTTTTCCTCTATTTCTTTGCATTGATCACTGAGGAAGGCTTTCTTATCTCTTCTTGCTATTCTTTGGAACTCTGCATTCAAATGGGTATATCTTTCCTTTTCTCCTTTGCCTTTAGCTTCTCTTCTCAGCAATTTGTAAGCCCTCCTCAGACAACCATTTTGCCTTTTTGCATTTCTTTTTATTGGGGATGACCTTGATTACTGCCTCCTGTACAATGTCACAAGCCTCCGTCCATAGTTCTTCAGGCACTGTGGCAGCCATTAACTCTCTCCTTAGTGTCTTTCACTAAATAGAAATCCTTAATTTTGTAACATTTATTTTAGAGTAATTTCAGACTTGGAGAAAAGTTGGCAAAATACAACAAAGTATTCTGCTCTTTCCTTCAGCTGGATTCCTAAATTATAACACTTTGCTGCCTTCTCTGTGTTGGGTGTATGTATGTATTTTTTCCTAAACCATTTATGAGTAAGTTGTAGACATAATGTTCCTTTATTTCTAAGTACCCAATATGTTGTTTTCTAGAAACAAGGACTTTACTTACATAACCACAGTATAATTATCAAAATTGGGAAATAAACTTTGATACAGTAATATTATCTACAGATTAGATACTAATTTATCCAAATGTTGCCATATATATCAACAATTTCCTTTATATAAAAAGAAAAAAAATATATGTTTGATTCAGGATCACACATTGCATTCAGCTGACCTATCTCTTTAGCCTCCTTCAATCTGAAGCAGTTCTGTAAACTTTCTATATCTTTCATGACCTTAACATTTTGGAAGAGTACAGAATATTCATTTTGAGAATGTCCCTCAGTTTGGGCTAGTCTGGTGTTTCCTTGTGATTAGATTCAGGCTGTGCATTTTGGGCAGGAATATCACAGAAGTGAGGCTGTACCTTCTCAGTACATCTTATCAGGAGGCATGTGATGTCAATTTGTCCCATTACTGGTGATGTTAACTTTGATTACTTGGTTAAGGTGGTGTCTGCCAGGTTTCTATGCTTTAAATTGCTGTTTTTCCCTCTGTAACTAATAAGTATCTTGTGGAGAATAAATACTTAATTTTTGTATAATCAAAATCATCAATGTTTTGCAACAGTGATTTGTTCTTTTGAAATGTTTTAGTCCTTCCCTACCACCCCTACGTAACAGATTTTCTGCAACATTGTTTTTCTATTAATTGTATAGTTTTATTTTTCTTACTTATGTTGTGAATGGTCTAGAATTCACTATGTATGTAT EMBV3_14985 TGGGTTCCGGATTGCTGAGATTTTCATGCGGCTGCCAGAAAGCTGGCCGCTGCCACCGGC Variant GeneID:768256|DECR2:NM_001078122:330_cdna 265^316 3 EMBV3_16571 GeneID:768256 25 GENE DECR2 MGC128381 2,4-dienoyl CoA reductase 2, peroxisomal EMBV3_39458 GTTGCTCTATAATGGACCTAACTCTTCTGGAGGAGTACGGGAAGCCCTTCTGGTGCTTCA Gene GeneID:505376|FBXO15:NM_001035021:73_cdna Constitutive 0 NULL GeneID:505376 24 GENE FBXO15 MGC127484 F-box protein 15 EMBV3_00072 AGCCCAAGCACAGTAGGGACCATCAGGTGGAAGATGTGACATCTGCTAGTTGCGGGGTTA Gene GeneID:616452|MESDC1:NM_001101258:57_cdna Constitutive 0 NULL GeneID:616452 21 GENE MESDC1 NULL mesoderm development candidate 1 EMBV3_15622 AGCTGGTTCATCCTTACCAGTGGCCAAGCACATTAACTTTCTCATACACTGACTGTTACT Gene GeneID:533829|SOX5:NM_001083471:43_cdna Constitutive 0 NULL GeneID:533829 5 GENE SOX5 MGC137756 SRY (sex determining region Y)-box 5 EMBV3_07504 CTCTGAAGAGCCACTTTTCTGCTGGCCCCTGTTCCATGACATTCCTCCTTTACATCACAG Gene BVT0102_096553 + 0 NULL GK000019.2:43132625-43148012 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09320 GAGTATTGAAGGCCCTAGTAAGGTGGACATCAACTGTGAGGACATGGAGGATGGCACGTG Gene BVT0102_059005 - 0 NULL GK000004.2:93619628-93640141 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182359 TCONS_00182360 TCONS_00182363 TCONS_00182364 TCONS_00182357 TCONS_00182358 TCONS_00182361 1 XLOC_110841 Coding TCONS_00182364 XLOC_110841 Coding Coding FLNC 4:93625026-93637331 j TSS136285 5258 1 TCONS_00182364_11 1325 28 0.574934980494148 0.0164854864622326 0.0107245765311673 0.0107428230098833 0.00643236712413016 0.00680150088638503 0.00508596545629736 0.00511728929214186 0.00487787649128358 0.00714033258402788 0.00203487546281287 4.49922100758339e-07 0.000125963838745254 0.00104398428332595 0.00361944061280979 0.00340438951540316 0.0204865535872204 0.010350777663284 0.0134196936664708 0.00659768540635743 0.00865259674247074 0.00456549790660333 0.0138562785104393 0.00706641516409895 0.00813164136373482 0.0128544806799061 0.00753247840277418 0.0075102869881981 0.00242846800579486 0.00102905521335545 0.000386851426380879 XM_005205701.1 FLNC PREDICTED: Bos taurus filamin C, gamma (FLNC), transcript variant 0.0 9158 99.92 0.96766831494865 NM_001458.4 FLNC Homo sapiens filamin C, gamma (FLNC), transcript variant 1, mRNA. 0.0 6693 88.80 0.96538607835679 TCONS_00182364_11 sp|Q14315|FLNC_HUMAN FLNC_HUMAN Filamin-C; 0.0 2628 98.27 0.999245283018868 0 coding 1 1 1 1 -0.241031689461695 0.0894849016502147 -0.0240341098471261 0.746862490674876 CAGGCTGGGGAGTAGCAGGTGTCCTGCGTGAAGTGACCACTGAGTTCACTGTGGACGCGAGATCCCTGACAGCCACGGGTGGGAACCACGTGACGGCTCGCGTGCTCAACCCCTCGGGCGCTAAGACGGACACCTACGTGACCGACAACGGGGACGGCACCTACCGCGTGCAGTACACGGCCTACGAAGAGGGAGCGCACTTGGTGGAGGTGCTGTACGATGACGTGGCCGTGCCCAAGAGCCCCTTCCGTGTGGGCGTGACTGAGGGCTGTGACCCCACCCGTGTCCGGGCCTTTGGGCCGGGCCTGGAGGGGGGCTTGGTCAACAAGGCTAACCGCTTCACCGTGGAAACCAGGGGAGCTGGCACCGGGGGCCTAGGCCTAGCCATCGAGGGCCCGTCGGAAGCCAAGATGTCTTGCAAGGACAACAAGGATGGGAGCTGCACCGTGGAGTACATCCCCTTCACCCCCGGCGACTACGACGTCAACATCACCTTCGGGGGCCGGCCCATTCCAGGGAGTCCATTCCGGGTGCCAGTGAAGGACGTGGTGGACCCCGGAAAGGTCAAGTGCTCAGGCCCAGGGCTGGGAGCCGGCGTCAGGGCCCGGGTACCCCAGACCTTCACAGTGGACTGCAGCCAAGCTGGCCGGGCGCCCCTGCAGGTGGCCGTGCTGGGCCCCACAGGTGTGGCCGAGCCTGTGGAGGTGCGTGACAATGGGGATGGCACCCACACCGTCCACTATACCCCAGCCACGGACGGGCCCTACACAGTAGCCGTCAAGTACGCCGACCAGGAGGTACCACGCAGCCCCTTCAAGATCAAGGTGCTTCCAGCCCACGATGCCAGCAAGGTGCGGGCCAGCGGCCCTGGCCTCAACGCCTCTGGCATCCCGGCCAGCCTGCCCGTGGAGTTCACCATCGATGCCCGGGATGCTGGGGAGGGCTTGCTCACTGTCCAGATCCTGGACCCTGAGGGTAAGCCCAAGAAGGCCAACATCCGAGACAACGGGGACGGCACATACACCGTGTCCTACCTCCCGGACATGAGCGGCCGGTACACCATCACCATCAAGTACGGCGGCGACGAGATCCCCTACTCGCCCTTCCGCATCCATGCCCTGCCCACTGGGGACGCCAGCAAGTGCCTGGTCACAGTGTCCATTGGAGGTCACGGCCTGGGTGCCTGCCTGGGCCCTCGCATCCAGATTGGGGAGGAGACGGTGATCACAGTGGATGCCAAGGCCGCAGGCAAGGGGAAGGTGACGTGCACGGTGTCCACACCCGACGGGGCGGAGCTCGACGTGGATGTGGTCGAGAACCACGACGGTACCTTCGACATCTACTACACGGCACCCGAGCCCGGCAAGTACGTCATCACCATTCGCTTCGGAGGCGAGCACATCCCCAACAGCCCCTTCCACGTGCTGGCGTGTGAGGCCATGCCCCGCGTGGAGGAGCCCCCTGATGTGCCGCAGCTGCACCGGCCCAGCGCCTATCCCACACACTGGGCCACAGAGGAGCCGGTGGTGCCTGCAGAACCCATGGAGTCCATGCTGAGACCCTTCAACCTGGTCATCCCCTTCACTGTGCAGAAAGGGGAACTCACAGGGGAGGTGCGGATGCCCTCTGGGAAGACCGCCCGGCCCAACATCACTGACAACAAGGATGGCACCATCACGGTGAGGTACGCCCCCACCGAGAAGGGCCTGCACCAGATGGGGATCAAGTATGACGGCAACCACATCCCTGGGAGCCCCCTGCAGTTCTACGTGGACGCCATCAACAGCCGCCACGTCAGCGCCTACGGACCAGGCCTGAGCCATGGCATGGTCAACAAGCCGGCCACCTTCACCATTGTCACCAAGGATGCCGGGGAAGGGGGCCTGTCCCTGGCCGTGGAGGGCCCGTCCAAGGCAGAGATCACCTGCAAGGACAACAAGGACGGCACCTGCACCGTGTCCTACCTCCCCACGGCGCCCGGGGACTACAGCATCATCGTGCGCTTCGACGACAAGCACATCCCCGGGAGCCCCTTCACAGCCAAGATCACAGGCGATGACTCAATGAGGACGTCACAGCTGAATGTGGGCACCTCCACGGATGTGTCCCTGAAGATCACCGAGAGTGACCTGAGCCAGCTGACCGCCAGCATCCGTGCCCCCTCGGGCAACGAGGAGCCCTGTCTGCTGAAGCGTCTGCCCAACCGGCACATCGGCATCTCCTTTACCCCCAAAGAAGTTGGGGAGCATGTGGTGAGCGTGCGCAAGAGTGGCAAGCATGTCACCAACAGCCCCTTCAAGATCCTGGTGGGACCATCTGAGATTGGGGATGCTAGCAAGGTGCGGGTCTGGGGCAAGGGCCTGTCGGAAGGACACACGTTCCAGGTGGCGGAGTTCATCGTGGACACTCGTAATGCAGGTTATGGGGGCCTGGGGCTGAGTATTGAAGGCCCTAGTAAGGTGGACATCAACTGTGAGGACATGGAGGATGGCACGTGCAAAGTTACCTACTGCCCCACCGAACCCGGCACCTACATCATCAACATCAAGTTCGCTGACAAGCACGTGCCTGGAAGCCCCTTCACAGTGAAGGTCACTGGCGAGGGCCGCATGAAGGAAAGCATCACCCGGCGCAGGCAGGCGCCATCCATCGCCACCATCGGCAGCACCTGTGACCTCAACCTCAAGATCCCAGGGAACTGGTTCCAGATGGTGTCCGCCCAGGAGCGCCTGACACGCACCTTTACCCGCAGCAGCCACACATACACCCGCACGGAGCGCACGGAGATCAGCAAGACACGGGGCGGGGAGACCAAGCGCGAGGTGCGGGTGGAGGAGTCCACCCAGGTTGGCGGAGACCCCTTCCCCGCCGTCTTCGGGGACTTCCTGGGCCGGGAGCGCCTGGGCTCTTTTGGCAGCATCACCCGGCAGCAGGAGGGTGAGGCCAGCTCTCAGGACATGACCGCACAGGTGACCAGCCCGTCGGGCAAGACGGAAGCTGCTGAGATCGTGGAGGGGGAGGACAGTGCATACAGCGTCCGCTTTGTGCCCCAGGAGATGGGGCCCCACACGGTCACTGTCAAGTACCGTGGCCAGCATGTGCCAGGCAGCCCCTTTCAGTTCACCGTGGGGCCGCTGGGTGAAGGTGGTGCCCACAAGGTGCGGGCTGGAGGCACGGGGCTGGAGCGAGGGGTGGCTGGCGTGCCAGCCGAGTTCAGCATCTGGACCCGAGAAGCAGGTGCCGGGGGCCTATCGATCGCCGTGGAGGGTCCCAGCAAGGCGGAAATTGCATTTGAGGACCGCAAGGACGGCTCGTGTGGGGTCTCCTATGTTGTCCAGGAGCCAGGTGACTATGAGGTCTCCATCAAGTTCAACGACGAGCACATCCCAGACAGCCCTTTCGTGGTACCCGTGGCCTCCCTCTCAGATGATGCTCGCCGTCTCACTGTCACCAGCCTCCAGGAGACCGGGCTCAAGGTGAACCAGCCGGCGTCCTTTGCGGTGCAGCTGAACGGTGCACGGGGCGTGATCGACGCTAGGGTGCACACGCCCTCGGGCGCCGTGGAAGAGTGCTACGTCTCCGAGCTGGACAGTGACAAGCACACCATCCGTTTCATCCCCCATGAGAATGGCGTCCACTCCATCGACGTCAAGTTCAACGGTGCCCACATCCCTGGCAGTCCCTTCAAGATCCGAGTTGGGGAGCAGAGCCAGGCTGGGGACCCAGGCTTGGTGTCGGCCTATGGTCCTGGGCTCGAGGGAGGCACTACAGGCGTGTCGTCGGAGTTCATCGTCAACACCCTGAATGCAGGCTCAGGGGCCTTGTCTGTCACCATCGACGGCCCCTCCAAGGTGCAGCTGGACTGTCGGGAGTGTCCCGAGGGTCACGTGGTCACTTATACTCCCATGGCTCCTGGCAACTACCTCATTGCCATCAAGTATGGTGGCCCCCAGCACATCGTGGGCAGCCCCTTCAAGGCTAAAGTCACAGGTCCCCGGCTCTCTGGAGGCCACAGCCTTCATGAAACATCCACGGTTCTGGTGGAGACTGTGACCAAGTCGTCCTCAAGCCGGGGTTCCAGCTACAGCTCCATCCCCAAGTTCTCCTCAGACGCCAGCAAGGTGGTGACACGGGGCCCCGGGCTGTCCCAGGCCTTTGTGGGCCAGAAGAACTCCTTCACTGTGGACTGCAGCAAAGCAGGCACCAATATGATGATGGTGGGCGTGCACGGGCCCAAGACCCCCTGTGAGGAGGTGTACGTGAAGCACATGGGGAACCGGGTGTACAACGTCACCTACACCGTCAAGGAAAAAGGGGACTACATCCTCATCGTCAAGTGGGGCGACGAAAGTGTCCCCGGAAGCCCCTTCAAAGTCAATGTGCCCTGAATCCCAGAAGTGCCTCCCCCAGCCTCGGCCCCCACCTCTGGCCAAACACACTCACACACACACACACACACACACACACACACACACAGGCCACACCCAGATGCACGCTCGCAGAATCAGACACCACAAACACCTGCCCTGGGGTGTGGACGGAGTGGCACTGCCCCCTCGCCGCCAGGCCCTCTGGCTGGAGGGCCTTGCCTGTTTCAGGGCAGTGTCCCTCGCCTCAAATGTGACCTGAGGGTGAACTGGGGGTTGGGGGGCCAGGGAAGCCCTGTGTTTTCTGGTGGGGCTGAGGCCAGTGGAGGAGCATGTGTTTGGGGGTGTCTGCATGTGTGAGAGAGGTCACCCTCAAATCGCACTGCCAGCCAGCCCTCCTAGCCGCTGAGGACTGCGTCCAGCCCCTCTGGTGGCCACAACCCCAGAGCGTTACGGCTTGGAAAACGAAGCACAGTCAGAGGAGAAAGTGTACCTAGCGGCAGCTGCACACATGTCCTGGCCCCAGGCGATTGAGACCCCAGCCAGGCTTCCTGGGGGACTGATTTCTTTTTTTTTTTTTTTAATAATTGCACAGCTCTGCCCCATGGGGGGGCCTTTTTTACACACTGCGAGGCCCAGCTTTCTGGGGGGCTTTTGCACATGTCATGCGGCTCAGCTGGGAGCCGTTTAGGCGGAAAACTCCAAATAAAGTGCGGCCTGTCGCAGAGGCGTGGTTGTGCCTTGTGTGTGTGCGCTTTCCTTGGCTGGCCAGCTCTGGCTGTTGACCCTCAACCAGGCCTTGGGAGGCAGAGGCTGGCTGCCTGTCCCCTCGAGGACCGAGTCAGGTCCAGGGGAAGGGCCTGGGGCAGAGAGGCACCCCTCTGGGCCATC EMBV3_07513 CTTGGCCATCCAGAGAGGCCCCAGTTGTGTCGGTATGATCTTGTACTGATGGAAAATGTT Gene GeneID:512028|LIPH:XM_002684870:6_cdna Constitutive 1 NULL GeneID:512028 1 GENE LIPH NULL lipase, member H EMBV3_41535 AACTTGGTTCTTGTGTGGTAGGTATAGAGGTGGAAATGCAGTTAGCTCCCGACATTCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20825 CAAACACCTCATCACCTGAGCTGCTCGGACCTGGGAAGAGCACAAAACGCAGGCCCAACT Gene BVV0102_255246 + 0 NULL GK000001.2:38021045-38722863 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00205014 TCONS_00066283 TCONS_00238845 TCONS_00252235 TCONS_00071186 TCONS_00071860 TCONS_00230121 TCONS_00209830 TCONS_00037672 TCONS_00220662 TCONS_00136620 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00177296 TCONS_00177370 TCONS_00009933 TCONS_00023614 TCONS_00218945 TCONS_00169198 TCONS_00250930 TCONS_00008224 TCONS_00011362 TCONS_00021569 TCONS_00174963 TCONS_00109898 TCONS_00178107 TCONS_00020400 TCONS_00039854 TCONS_00137878 TCONS_00197452 TCONS_00054573 TCONS_00066221 TCONS_00239419 TCONS_00189891 TCONS_00021878 TCONS_00038458 TCONS_00037667 TCONS_00229819 TCONS_00062744 TCONS_00048820 TCONS_00109027 TCONS_00155780 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00064462 TCONS_00178325 TCONS_00161667 TCONS_00167260 TCONS_00249135 TCONS_00040836 TCONS_00107735 TCONS_00209032 TCONS_00140840 TCONS_00160965 TCONS_00167561 TCONS_00130290 TCONS_00200574 TCONS_00207365 TCONS_00089010 TCONS_00070839 TCONS_00010471 TCONS_00224483 TCONS_00088088 TCONS_00021595 TCONS_00157613 TCONS_00117619 TCONS_00199424 TCONS_00218857 TCONS_00238901 TCONS_00155778 TCONS_00059708 TCONS_00071033 TCONS_00161835 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00116665 TCONS_00249569 TCONS_00249087 TCONS_00223554 TCONS_00070810 TCONS_00066275 TCONS_00107832 TCONS_00222114 TCONS_00131550 TCONS_00199037 TCONS_00110403 TCONS_00074566 TCONS_00019199 TCONS_00122686 TCONS_00111731 TCONS_00166482 TCONS_00180345 TCONS_00152645 TCONS_00218178 TCONS_00249639 TCONS_00210234 TCONS_00252353 TCONS_00224113 TCONS_00007677 TCONS_00064812 TCONS_00229957 TCONS_00242131 TCONS_00116100 TCONS_00250720 TCONS_00080603 TCONS_00124846 TCONS_00010366 TCONS_00152744 TCONS_00038381 TCONS_00023360 TCONS_00222766 TCONS_00242885 TCONS_00175546 TCONS_00207069 TCONS_00209846 TCONS_00023373 TCONS_00252810 TCONS_00209711 TCONS_00129528 TCONS_00116172 TCONS_00252107 TCONS_00040883 TCONS_00148280 TCONS_00056146 TCONS_00249011 TCONS_00250530 TCONS_00123620 TCONS_00176735 TCONS_00248864 TCONS_00224475 TCONS_00031939 TCONS_00039951 TCONS_00131137 TCONS_00238933 TCONS_00155779 TCONS_00142123 TCONS_00186525 TCONS_00178417 TCONS_00009259 TCONS_00252226 TCONS_00224484 TCONS_00233560 TCONS_00020017 TCONS_00209636 TCONS_00007431 TCONS_00019961 TCONS_00245928 TCONS_00233372 TCONS_00218896 TCONS_00153218 TCONS_00178427 TCONS_00240534 TCONS_00123168 TCONS_00251914 TCONS_00063080 TCONS_00207755 TCONS_00199802 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00040740 TCONS_00251804 TCONS_00153137 TCONS_00200529 TCONS_00064619 TCONS_00208264 TCONS_00020345 TCONS_00222057 TCONS_00250726 TCONS_00221884 TCONS_00122313 TCONS_00177995 TCONS_00020023 TCONS_00251907 TCONS_00109858 TCONS_00038666 TCONS_00218898 TCONS_00115416 TCONS_00218552 TCONS_00007359 TCONS_00031910 TCONS_00251929 184 XLOC_107421 XLOC_069855 XLOC_124565 XLOC_040997 XLOC_145511 XLOC_155176 XLOC_042958 XLOC_043630 XLOC_139613 XLOC_128341 XLOC_021501 XLOC_133979 XLOC_082831 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_107070 XLOC_107144 XLOC_005485 XLOC_014281 XLOC_132264 XLOC_103305 XLOC_153873 XLOC_003782 XLOC_006913 XLOC_012242 XLOC_104746 XLOC_065802 XLOC_107880 XLOC_011077 XLOC_023671 XLOC_084087 XLOC_119113 XLOC_032382 XLOC_040935 XLOC_146085 XLOC_115928 XLOC_012551 XLOC_022282 XLOC_021496 XLOC_139313 XLOC_037471 XLOC_028951 XLOC_064932 XLOC_094822 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_039186 XLOC_108098 XLOC_098554 XLOC_102096 XLOC_152078 XLOC_024650 XLOC_063645 XLOC_127543 XLOC_085269 XLOC_097858 XLOC_102397 XLOC_079001 XLOC_122226 XLOC_125882 XLOC_053796 XLOC_042616 XLOC_006022 XLOC_137538 XLOC_052875 XLOC_012268 XLOC_096068 XLOC_071785 XLOC_121077 XLOC_132176 XLOC_145567 XLOC_036490 XLOC_042806 XLOC_098720 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_070831 XLOC_152512 XLOC_152030 XLOC_136854 XLOC_042587 XLOC_040989 XLOC_063742 XLOC_135423 XLOC_080255 XLOC_120690 XLOC_066307 XLOC_046320 XLOC_009879 XLOC_074241 XLOC_067631 XLOC_101320 XLOC_110113 XLOC_092410 XLOC_131641 XLOC_152582 XLOC_128744 XLOC_155294 XLOC_137409 XLOC_003238 XLOC_039536 XLOC_139451 XLOC_148795 XLOC_070269 XLOC_153663 XLOC_049487 XLOC_076389 XLOC_005917 XLOC_092509 XLOC_022206 XLOC_014027 XLOC_136073 XLOC_149548 XLOC_105327 XLOC_125588 XLOC_128357 XLOC_014040 XLOC_155751 XLOC_128222 XLOC_078241 XLOC_070341 XLOC_155048 XLOC_024697 XLOC_090162 XLOC_033949 XLOC_151954 XLOC_153473 XLOC_075172 XLOC_106509 XLOC_151807 XLOC_018184 XLOC_023768 XLOC_079842 XLOC_145599 XLOC_086548 XLOC_112577 XLOC_108190 XLOC_004815 XLOC_155167 XLOC_143042 XLOC_010695 XLOC_128147 XLOC_002992 XLOC_010639 XLOC_150855 XLOC_142854 XLOC_132215 XLOC_092983 XLOC_108200 XLOC_147198 XLOC_074722 XLOC_154855 XLOC_037807 XLOC_126270 XLOC_121454 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_024554 XLOC_154745 XLOC_092902 XLOC_122181 XLOC_039343 XLOC_126777 XLOC_011022 XLOC_135366 XLOC_153669 XLOC_135195 XLOC_073868 XLOC_107768 XLOC_010701 XLOC_154848 XLOC_065762 XLOC_022489 XLOC_132217 XLOC_069586 XLOC_131872 XLOC_002920 XLOC_018155 XLOC_154870 Coding TCONS_00233560 XLOC_143042 NonCoding NonCoding - 8:92837961-92838349 - TSS175064 388 1 TCONS_00233560_1 87 1.00257731958763 1 0 0 6.47449892410887e-06 1.45753048573501e-05 2.14024172268101e-05 1.06039044869753e-06 1.02436013452191e-06 0 6.24283151548598e-06 1.17319659146115e-05 8.83699995848118e-06 5.89995753792029e-06 9.61796768479136e-06 5.54631235203282e-06 4.45978395891205e-06 1.502533153669e-05 0.000192867842721031 0.0856848692931864 0.000875165884924454 9.24088388757177e-06 1.15841318822913e-06 1.30400914292684e-06 9.09073043177422e-05 6.33333360973377e-06 0.000103798968979324 0 4.8422483223872e-05 5.37684084509171e-06 1.48533757374075e-05 3.22925558412209e-05 5.89741173966195e-05 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-25 120 81.45 0.31701030927835 0 noncoding AAGCTTGTGTCGGTGTTCTGATGGGTGGAGCTGTATTTCTTCTCTTTGTTCAGTCGCGCTGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCGCAGTGCCTCAGCCACACTGGGTCTGCCCCCGCTCACGGCGCATGTAGCCTCCCTGCCCACACTGCTCGGGCTCTAGGTTGTTCTGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGTACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGAGTTTTGTGCTCTTCCCAGGTCTGAGCAGCTCAAGTGATGAGGTGTTTGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCAC TCONS_00228645 . 5' 8495 TCONS_00228645 . 5' 8495 EMBV3_01398 CCATTAGCAGACTGCAGGGTCAACTTCTATTTTCCATACCAACTCCCTTATTTGCATAGC Gene BVT0102_083063 + 0 NULL GK000003.2:75744769-77093221 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170308 1 XLOC_103554 NonCoding TCONS_00170308 XLOC_103554 NonCoding NonCoding - 3:76502410-76506268 - TSS127283 3195 1 TCONS_00170308_6 85 0.241001564945227 2 0.172154524241639 0.000640316947678597 0.00185557935237546 0.00107226866780627 0.000489651783845966 0.000970791197115572 0.000286607568807953 0.000155913566980941 0.000177335397769941 0.000545831003952202 8.9614402491934e-05 1.1289563881961e-05 3.07070031216117e-05 2.15475399738639e-05 9.64697569475306e-05 1.81388285804165e-05 1.25571086523537e-05 0 4.4765866146924e-11 0.000981510099797286 0.00100831082199208 0.000319325666828631 5.3419461227275e-05 0.000140697394657486 0 0.00112058220429797 0.000859208295959811 0.00104388863831221 2.40504958930143e-05 8.3568574298206e-05 9.40883779479813e-05 NM_001101892.1 C3H1orf109 Bos taurus chromosome 3 open reading frame, human C1orf109 (C3H1orf109), mRNA. 3e-114 417 83.38 0.123943661971831 0 noncoding 0 0 0 0 -0.410964131550678 0.0351791292037003 0.0588033519253628 0.371266473640412 TGGTGGCTCAGTGGTAAAAATCTGCCTGCCAGTGTAGGAGACCCGAGTTTGATCCCTGGTCCAGGAAAATCCCACAGGGAGGCCTGGAGTGCTGCAATTCATGGGGTCGCAAAGAGTCGGACACAACTAAGCCACTGAACTGAACTGAACTGAACCCTCAGTAAATCTTTAATCCAATTTTCTGCTAATGGGTGGGTCTGTGTTCCCTCCCTGTAGTTTGGCCTGAGGCCATACTATGGTAGGTATAATGGTGACCTCCTTCAAAAGGACTGATGCCAGCATGCCATGGCTCCCAGGACTGTTGTATTCATGACTCTGACCCTGTGGCAGGCCACTGTCAACCCACACATCCACCGGAGACTCCTGGACATTCACAGGAAAAGATGAGCGCATGTCCTTCTATTCTACCATCTTGACAAGAACCATAAAGAAGGCTGAGAACTGAAGAATTGATGCTTTTGGACTGTGGTGTTGGAGAAGACTCTTGAGAGTCTCTTGGACTGCTAGGAAATCAAACCACAAACCAGTCAATCCTAAAGGAAATCAGTCCTGAATATTCACTGAAAAGGCTGATACCAAAGCTGAACCTCGAATACTTTGGCCACCTGATGTGAAGAGCCAACTCGCTAGATAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGAGACAACAGGGGATGAGGTGGTTGGATGGCATCACTGACTTGATGGATATTAGTTTGAGCAAGCTCTGGGCGATGGTGAAGGACAGGGAAACCTGGTGTGCTATGGTCCATGGGGTCGCAAGATGTTAGACATGACTGAGCAACAAAAGGACTTCTCAACCTTTTCAGTAAGTAAAACACCTTTCAGTTTTAAAGGAGGGGACAGATTATGCAGCATTTCTGTGTATATATAATTACAATTTTCATATATCATATAGTGTTCTGGTGTCCATAGCACACCATTTGGTAAATGCTTGTCTGTCTTAATAATAACAATAATAATAGCCATTGTATATTGATGGTCTACTGTGGGTAAAGCCAATGAGTCTCAATCCCATTGAAAAGTCATTTCCATCTAGTCAATTGCTATTGGCCTTTCTATTGCTGTTGTCACTGTGTTGTTTTTATCACTTCAGACACACTAAATCAAAAATCTCAGTGTGGAACCATGATTGTGATGAATAGCTAAAGTTGAGGAGCGTCATGCTAAGTACTTTCTAAGCATTATTTCATTTAATTGTTTCAACTGCTTAAAGCATAGGTTCTATTAGTATAGTTCAATACATTAACAATAGTGTATGTTTGGCCTTAGAACTACTATTCTCATGTCCCTCATTTAGGGAAGAAATTATTTGTCCTGCTTTTTCTTATTGTACCTTGACTTTGCTTTACAAACCTTCTTTTCATGGTTCTTCAGGCAGCACAAGCAACCTGAATTAACCTAATAAGATGGATTTATTTGCTATTTCCTTTAAATATATAATGTTTTATTGGGGAGATCCTATCTATTAAAGTCAAAATTCTGTTGCTCAGAGTAAGTAAAACCAGTAAATAGTCATCATATCTCTTTTTAGAATATACTTCCTTTAAATTGTTTCCTCCATACATTTCACAAATAGCCTGGTAAAGGGAAATTCATTCAAATTATTTTTCTCCTAACATATAGTTGAAATTACCTTAAAAAGAAAGAAATTTTGAATGGTATGGGGAAAGGGGGAGCATAATGGGATATTAAGTTGCCAGCTGAGGATTGAACAGTTAAAATACAGATGAAGAAAAGGTAGCACCAGAATGAGAAAAAGTAAAGAATGGAAAGAGAGAAGGAGACCAAAACAAATTTGCAAATTTTGAAAATTTGCTGAGGATCCAAATAACTCTAATCCTGTTATTGGAGTTAGACTGCTTTAAAATATGCTTTAAAAATATTATCTCATATGTTAAGATTTACCATTAGCAGACTGCAGGGTCAACTTCTATTTTCCATACCAACTCCCTTATTTGCATAGCAAAATACCAAAAAAAAAGTTCAGGACTAATTCTCTCATTGTGTATATTCTATTTTGCACCCAAATTACTAATGCCCTCCTTTTTAAAATGCAAATTGCACGAGACTTCAGAAATCAATTCATGAATTTCTAATTTGGTAAATCTTCCCACCTTGAATTGGAGAGTTAACCCCCTGGGAAAAACCTTAAACGTCTTAAGACTCCAAAGCACTTGAAGTCTCTTCTTTTTTTCTGAAATTTTCACTTCAATTGGCATTTTGAGCTTGAAAAACTCAAATAGCCAGTAGAGGTAAGTTATCTATGAATAAATGAAAAACTCGATCTCAAATCAAAAACTGATGAAAGACCCAAGCTATAAAGCTAGAATGGGCTGCAAAGAGAAGGCAAGCATTTAAGATTAGATCACACTGTGACAATGAAAGAAGTCAATAAGAAATCCCCAAAGAAGGTAAAAACAACAGTCCCAAGCAAATTAAGAAAGCCAAGGAGCCTAAGTTAACAATAATCATATCCTACTCATAATTGATGCTCTATTTAAGTACAGTGCCAAGGAGAGGTTTTGCCACATGTTCATCAGTATCAGAGTTATTAAAGGAGTATATCAGTTAATAGGATAAACAAAGACTGTGCTGCAGATCATGCTGTAAAAATCAAAACCCCATAAAATGTATCCTATAAAAAAAAGTGTCAACCTGCTAAATGAATAAAAGCTTGACCACCTTCATCCTTCATTTTAGTTTATGTTGTCTTTTATAAAACAACAGAATGGGCACATGATCTTTAATGGGCAAATTGTTAGGAGAAACACTGAAATCACCCACCCTGGTCAGGCACCATAGTAACCATCTTCACAAGTTACTTTATGATTGGAGGTCCCGGTAAGGAACATGGAACTAACAAGACACCATCAAACAGAAGGATTTGGAAAAGGTCAAAAGGAGACAGGAGATGCCCGTCCATAGGTCCTACCAACCTCTCAGAATCCTCACTGAAATCCACCTTGGCTGAGCAATGTGTGTCACGAGGAAGGACCCTGAGTCAGAATGACTGGTTAGAGGCCAACCTAAGAACAAACCTCATCACCATAAAACCCAAGGCTGTGAGCCACATGGCAGAGTAGTTCTCCTGGTTTCCCTTACCCTCCTGCTCTCTGCCTGGACACTCCCTTCCCAATAAAGTCTCTGGCTTTATCACCA TCONS_00173729 r 5' 533544 TCONS_00173729 r 5' 533544 EMBV3_12387 AAGGAGCTACAGGAGCAGGAGGAGTTACTTGTGGACCTTCATGGAGCTGTTGCCTTTAAG Gene GeneID:508540|LOC508540:XM_002688371:213_cdna Constitutive 1 NULL GeneID:508540 6 GENE LOC508540 NULL similar to genethonin 1 EMBV3_27283 CAGAGGAGTCATTATCAAGCAGGGATGTTTACTGAAGCAGGGCCATAGGCGGAAGAACTG Gene GeneID:518658|PLEK:XM_002691434:110_cdna Constitutive 0 NULL GeneID:518658 11 GENE PLEK NULL pleckstrin EMBV3_11274 TCATGCTGAGCGTCAGGCTATCAACACAAGAGTCCAAGGTTCGGCGGCTGATATTGTCAA Gene GeneID:535323|POLQ:XM_002684789:134_cdna Constitutive 0 NULL GeneID:535323 1 GENE POLQ NULL polymerase (DNA directed), theta EMBV3_06191 ACACTGAGAGTGGGAGACAGGGAGGAAGACCAGGAACTGGAAGTGAGCCAGTGTGAAAGA Gene GeneID:515507|TMEM101:NM_001046202:248_cdna Constitutive 1 NULL GeneID:515507 19 GENE TMEM101 MGC137376 transmembrane protein 101 EMBV3_25057 TACAGGAAGGAGGGTCTGAAATGGCCAGGACCTCACATGTTGCCAGAAAGAGCCACTCAT Gene GeneID:514951|RBM9:XR_082692:62_cdna Constitutive 0 NULL GeneID:514951 5 GENE RBM9 NULL RNA binding motif protein 9 EMBV3_14403 ATTTTGAGCAGCACCATCAAATCTTACAACGCCGGGTTTGCTGCTGAGGGTGTGGAATCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35768 TTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCA Gene BVV0101_028265 + 0 NULL GK000006.2:27226935-27328412 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063810 TCONS_00149039 TCONS_00107077 TCONS_00033207 TCONS_00148450 TCONS_00149040 TCONS_00149037 TCONS_00206816 TCONS_00167122 TCONS_00168479 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00050935 TCONS_00154285 TCONS_00131536 TCONS_00107093 TCONS_00161424 TCONS_00233533 TCONS_00088422 TCONS_00218954 TCONS_00006023 TCONS_00080098 TCONS_00106012 TCONS_00238291 TCONS_00222176 TCONS_00185604 TCONS_00107098 TCONS_00223049 TCONS_00231769 TCONS_00157045 TCONS_00217532 TCONS_00033186 TCONS_00130054 TCONS_00011614 TCONS_00157046 TCONS_00178734 TCONS_00220551 TCONS_00186835 TCONS_00142474 TCONS_00222177 TCONS_00218948 TCONS_00140794 TCONS_00230354 TCONS_00148446 TCONS_00066105 TCONS_00207544 TCONS_00231774 TCONS_00011613 TCONS_00176791 TCONS_00018616 TCONS_00186489 TCONS_00157808 TCONS_00131535 TCONS_00178886 TCONS_00249554 TCONS_00033206 TCONS_00162570 TCONS_00071451 TCONS_00186834 TCONS_00071397 TCONS_00012044 TCONS_00072307 TCONS_00222175 TCONS_00149044 TCONS_00178735 TCONS_00240375 TCONS_00107095 TCONS_00178732 TCONS_00218950 TCONS_00218953 TCONS_00050934 TCONS_00123275 TCONS_00098202 TCONS_00117596 TCONS_00207545 TCONS_00098200 TCONS_00107086 TCONS_00230834 TCONS_00088420 TCONS_00206815 TCONS_00158397 TCONS_00201119 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00178730 TCONS_00178729 TCONS_00253351 TCONS_00106013 TCONS_00238290 TCONS_00048460 TCONS_00178733 TCONS_00240373 TCONS_00056187 TCONS_00063809 TCONS_00140799 TCONS_00158779 TCONS_00162571 TCONS_00218947 TCONS_00185585 TCONS_00217533 TCONS_00207147 TCONS_00168478 TCONS_00142472 TCONS_00129561 TCONS_00021875 TCONS_00157807 TCONS_00066112 TCONS_00185570 TCONS_00167922 TCONS_00238284 TCONS_00230829 TCONS_00054137 TCONS_00104289 TCONS_00071703 TCONS_00185581 TCONS_00238280 TCONS_00232767 TCONS_00031770 TCONS_00231772 TCONS_00156869 TCONS_00162567 TCONS_00106011 TCONS_00231775 TCONS_00098201 TCONS_00107076 TCONS_00158314 TCONS_00136035 TCONS_00140805 TCONS_00154284 TCONS_00033205 TCONS_00178731 TCONS_00117597 TCONS_00063811 TCONS_00207543 131 XLOC_038536 XLOC_090916 XLOC_062988 XLOC_019441 XLOC_090330 XLOC_090917 XLOC_090914 XLOC_125336 XLOC_101958 XLOC_103118 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_031050 XLOC_094045 XLOC_080241 XLOC_063004 XLOC_098315 XLOC_143015 XLOC_053209 XLOC_132273 XLOC_001586 XLOC_048982 XLOC_062697 XLOC_144958 XLOC_135485 XLOC_111657 XLOC_063009 XLOC_136355 XLOC_141257 XLOC_095505 XLOC_131531 XLOC_019420 XLOC_078765 XLOC_007165 XLOC_095506 XLOC_108507 XLOC_133868 XLOC_112886 XLOC_086899 XLOC_135486 XLOC_132267 XLOC_085223 XLOC_139844 XLOC_090326 XLOC_040823 XLOC_126059 XLOC_141262 XLOC_007164 XLOC_106565 XLOC_009300 XLOC_112541 XLOC_096263 XLOC_080240 XLOC_108659 XLOC_152497 XLOC_019440 XLOC_099451 XLOC_043222 XLOC_112885 XLOC_043168 XLOC_007594 XLOC_044076 XLOC_135484 XLOC_090921 XLOC_108508 XLOC_147039 XLOC_063006 XLOC_108505 XLOC_132269 XLOC_132272 XLOC_074829 XLOC_058448 XLOC_071762 XLOC_126060 XLOC_058446 XLOC_062997 XLOC_140324 XLOC_053207 XLOC_125335 XLOC_096851 XLOC_122767 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_108503 XLOC_108502 XLOC_156291 XLOC_144957 XLOC_028592 XLOC_108506 XLOC_147037 XLOC_033990 XLOC_038535 XLOC_085228 XLOC_097231 XLOC_099452 XLOC_132266 XLOC_111638 XLOC_125665 XLOC_086897 XLOC_078274 XLOC_012548 XLOC_096262 XLOC_040830 XLOC_111623 XLOC_102758 XLOC_144951 XLOC_140319 XLOC_031946 XLOC_062346 XLOC_043473 XLOC_111634 XLOC_144947 XLOC_142251 XLOC_018015 XLOC_141260 XLOC_095329 XLOC_099448 XLOC_141263 XLOC_058447 XLOC_062987 XLOC_096768 XLOC_082254 XLOC_085234 XLOC_094044 XLOC_019439 XLOC_108504 XLOC_071763 XLOC_038537 XLOC_126058 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_22247 GCAGCTGCTGCCCACAGCTCCAGGTCCTGGAGGTGCTGCGGCTGTTGAACCTGATGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10612 CGGAAGGTCGGGGAGTCCATGGGTATTGCCTCTGCTCAATCTATCATGTGGATCGTAACT Gene GeneID:514748|FAM82A2:NM_001075679:151_cdna Constitutive 1 NULL GeneID:514748 10 GENE FAM82A2 FAM82C MGC139009 family with sequence similarity 82, member C EMBV3_28424 GTTGTTTCTTGGACTGCAGAAATTGGAAGATTAAAGAGAAGTTGACTGCGGATCCAGACA Variant GeneID:509231|PIAS1:NM_001075396:101_cdna 841^946 1 EMBV3_17106 GeneID:509231 10 GENE PIAS1 NULL protein inhibitor of activated STAT, 1 EMBV3_28381 CAAAGACGGTAAGAAACCTAGGACTAAAGCACCCAAGATTCAGCGTCTCGTGACTCCACG Gene GeneID:100299516|LOC100299516:XM_002685611:260_cdna Constitutive 0 NULL GeneID:100299516 2 GENE LOC100299516 NULL similar to ribosomal protein S6 EMBV3_43272 CTGATTCGAGTGTCCTCTCACCCCTGGATTCTCAGTACCCAGCAAAAGAGCCAACATATG Gene GeneID:282184|CLDN16:NM_174519:36_cdna UTR3_Alt 2 NULL GeneID:282184 1 GENE CLDN16 NULL claudin 16 EMBV3_31990 GCCGCCCTCAGACCCCTCGTGAAGCCTAAGATCGTCAAAAAGAGGACCAAGAAGTTCATT Gene GeneID:615556|RPL32:NM_001034783:158_cdna Constitutive 0 NULL GeneID:615556 22 GENE RPL32 MGC127804 ribosomal protein L32 EMBV3_11846 CTCTCTCGCCTTCGGACGAGCCGACATTAAAACCCCAAAGAAACCAAAACGGAAACAGAG Gene BVV0101_036754 - 0 NULL GK000005.2:107750161-107796084 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19578 TGAGAGACTGATGAAGCTGCAGAACCAGCGAGGCGGCCGAATCTTCCTTCAGGATATCAA Gene GeneID:281173|FTH1:NM_174062:4_cdna Constitutive 1 NULL GeneID:281173 29 GENE FTH1 MGC128102 ferritin, heavy polypeptide 1 EMBV3_25181 TCATGACCTACTCCCATGACAACATCATCTGCGGGATCACCTCCGTCTCCTTCTCCAAGA Gene GeneID:281201|GNB1:NM_175777:16_cdna UTR3_Alt 2 NULL GeneID:281201 16 GENE GNB1 MGC129044 guanine nucleotide binding protein (G protein), beta polypeptide 1 EMBV3_00763 TGCCATCTGGCTGCGAGGGAGTCTGGGAAAGCGACTAGCTGGACCCCCCAGGCATTTACA Gene BVT0102_209293 + 0 NULL GK000018.2:63729369-63766671 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091813 1 XLOC_056584 NonCoding TCONS_00091813 XLOC_056584 NonCoding NonCoding - 18:63735705-63736801 - TSS69159 1096 1 TCONS_00091813_2 109 1 0 0.000471730884012104 0.000229206154192346 0.000329294013427646 3.03070798950224e-05 0.000364883330608784 9.79121504003654e-06 5.3209001053797e-06 5.39664100112675e-05 0.000143980498578692 0.000101360332600647 5.22169049498492e-05 3.26248489359437e-06 2.61795981105664e-06 0 3.58116937152582e-05 0.0014699903425384 4.54441917660338e-05 0.00103018979076388 0.000399112378044724 0.000242777121462273 5.53965113879851e-06 0.000575507792179902 0.000485487331330704 0.00116251225100285 0 0 0.000470442228968865 0.000508302720747533 0.000225898671892263 0.000268795943091738 NM_001105649.1 ZNF444 Bos taurus zinc finger protein 444 (ZNF444), mRNA. 0.0 783 99.32 0.404197080291971 0 noncoding 0 0 0 0 0.090841634361678 0.410451267891869 0.0681849728830962 0.224229124015165 CTGGCTGCAGACATGGCCTCTCCAAGCCAACCTCCTCTGCCAGGCGTGGCCACACGGACCCCGGGCGTGGAAGGAGGCCCTGCCAGAGACCTTCCGCGAGGGTCACAGTTCTGCGGGCCGGAAGGGCAGGCCTCTGCCTTCAATTCCAGGGCCGGCCCCTTCCGGAGCGTTATTAGCCCCGTCCCACAAGGTGGACGCTGAGGCCTGAGCGCTTGCCCGAGGCACCCTGGAGACCACCTGGAGCCCCTGCCTCCACCAGCTGTTAACGGTTTCAGAGGTGGGGCCCGACTCCGGCTGTAAATGCCTGGGGGGTCCAGCTAGTCGCTTTCCCAGACTCCCTCGCAGCCAGATGGCAGGGCCCCGTGGCCTGGGTCTTGCTGGTCCAGGGGCTGGCAGAGCGAAGCGAGGGCCGTGACCGAGGGGGGTTCCGCCAGCAGCAGCCGGGCCAGGCTCCTGCACTCGATGCGCAGGAGCCCAGGGCAACTCACTCCGCCACCTCTCAAGGGCTCATGGAGTCTCTAGACTCAAGGGCAAGGAACCGAGCCCTGGTCTGCGCCGACTCCCAGGGCCCTGCCAGCCGGGAGGGTCCCCGGTGGGGCCCACCATGCCCCTCCCCGGACGACAGCTTGGACAGAATGCAGGCGCCGGGGTCTGCACAACTCATCAGCGGCTTTATTAACAACTCTCCAGACGCTAGCCAGCGGGGGTCTCCGGCGCGCGTCCCGGGAGCCGGCGTCTGTCCACCTCGGGCCTGCCTGACAGGCCGCTCGCAGCGCGAGGACCCCAGAGCTCGATCCCCCTGCCGGAACCCGGGCCGTCCTGTCGGAGCTGTGCCGTGATCCACCCGTCCTGGGAGGGGCAAGGGGCGGTCTCCCCGGGCAGGACAAGACCCAGTCCCCTCCCTGCAGGCTCCTCCGGCCCAGGGCCCTGCCCCTGTCCAGGTCTTCGTCTAGGCTCCGGGCCCGGGAGGGTCGGGGTGGGGAGGACCGCAAAGGCACCCTCGCACCGCAGAAGCTGCGAGGACGAGGGCGGGGCGGGGGCTGACGCGCAGAGTGAGGTTCAGGGCATCACGCGACAGGGCTCAAGGCACTGGGGT TCONS_00084835 TCONS_00084836 . 3' 6338 TCONS_00084835 TCONS_00084836 . 3' 7433 EMBV3_06826 CAGAGCCTACAATTGCTGATCTCGGAGCTGATCCCATGGGCAGTTGAGAATGGCCGCAGA Gene BVV0102_275736 + 0 NULL GK000011.2:98942406-98959313 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026141 TCONS_00026138 TCONS_00026140 1 XLOC_014933 Coding TCONS_00026138 XLOC_014933 Coding Coding COQ4 11:98931060-98945372 j TSS18819 1241 1 TCONS_00026138_2 265 8 0.913842498777164 0.00101958839720041 0.000182638088488928 0.000543431004688961 2.30384561542747e-06 0.000124799801353409 0.000319942888173447 0.000155072977077071 7.21872339150076e-05 0.000179108330890776 0.000415796596779646 0.000427091805391146 2.45958171792667e-12 0.000304985397673962 5.4978750693434e-11 5.2279149110515e-12 0.00223725417601683 0.00048237898511889 0.00179783363261066 5.86902985975111e-05 0.00150548660047061 0.000770544234851914 0.00070347520674274 0.000683992569123615 0.00205206650159112 0.000710960748291027 0.000590394539882927 0.000312474249765289 4.36499677321339e-08 0.000494756224587917 0.000275199171123831 XM_005213246.1 COQ4 PREDICTED: Bos taurus coenzyme Q4 homolog (S. cerevisiae) (COQ4), 0.0 2239 100.00 0.999194198227236 NM_016035.3 COQ4 Homo sapiens coenzyme Q4 (COQ4), mRNA. 0.0 924 82.06 0.747784045124899 TCONS_00026138_2 sp|Q9Y3A0|COQ4_HUMAN COQ4_HUMAN Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; 9e-153 432 81.13 0.99622641509434 1 coding 0 0 0 0 -0.0786789247610819 0.48036033140476 0.0321015984695584 0.491107999275998 GTAGGGTCCGGTGCTGAACCACAAACGTGGCGAGGCTTACTTGGAGACCTCTCTTGGAGGACGTCTGACGGTCCCCGCTGCCATGGCGACACTGCTGCGCGGGGTCCTGCGCCCGCTTTACGCCTTCCGGGGCGGTCCCGGCCCTCCTGCAGGTGTTCCCTTCAGAGCCGTGAGCCATGGCACCGGCCTGCTCTACCCCGAACACATCCCCACCTCCGTGCTGCAGAAGGTGCTGCTGGCCGCCGGCTCTGCCGGGATGGCGCTGTACGATCCCTATCGCCACGACATGGTTGCAGTTCTGGGAGAGACCACAGGACGCCGTACCCTGAAGGTCCTCAGGGACCAGATGAAGAGGGATCCAGAGGGTGCCCAGATCCTGCAGGAGCGTCCCCGGATCTCGCTGTCCACCCTCGACATGGGCAAGCTCCGGAGTCTGCCCGAGGGCTCCTTTGGCCGCGCGTATCTCCATTTCCTGGATGTGAATAGGGTCTCCCCAGACACCCGCGCACCCACCCGCTTCGTGGACGATGAGGAGCTAGCATACGTGATCCAGCGGTACCGGGAGATCCATGACATGCTCCACGCCCTGCTGGGCATGCCCACCAACATCCTGGGGGAGATCGTGGTGAAATGGTTTGAGGCTGTCCAGACCGGCCTGCCCATGTGCGTCCTGAGTGCACTCTTTGGACCGATCCGACTCAGCGCCCAGAGCCTACAATTGCTGATCTCGGAGCTGATCCCATGGGCAGTTGAGAATGGCCGCAGAGCCCCGTGTGTCCTCAACGTGTACTACGAGCGGCGCTGGGAACAGCCTCTGCAGGCTCTGCGGCAGGAGCTGGGCATCACGGAACCACCCCTGCGTGTGGAGGGCCTGGTGTAGACCCTGAGCGCCTGAGGCCCCGCCCCACCCCCCGCTTCCTCCGGGGGTGGAGCACATCTGTGCCAGCACCCAGGTTCCTCTGTGAACTCTGACCCTTGGACGTCACTCATCATAATTTATCAGAGGGAGCAGCCAGTGGAGCTCCTGGGGAGCCAGAAGTGAACCTCGAGTGCTCAGGGATTGCTCAAGTCCACAACCCATGTGCCTGACCCCTCCCTGCCTGCCAGCGTTCTCTGGGTGCCAGCCTGGGGGAGTCTTCACAGGGGGAAGGGCTACCCTTTATTCCCAAGGCCTGAGGAAGAGGGAGGCAGAGGGGGAGGCGGGTCTCTGCTGTCTGAATAAAGGCTCCCATCAGGTCCCA EMBV3_16801 GTCACTGTGGCCATTGCTGCCCACTATTTTTCTGGGGAAGACAAGAGATCCTCCCAGCTG Gene GeneID:541094|ERMP1:XM_002689609:26_cdna Constitutive 0 NULL GeneID:541094 8 GENE ERMP1 NULL endoplasmic reticulum metallopeptidase 1 EMBV3_43425 AGGCCTGGGACCCCTTTCTGTCTCATCACCAGTGACTTGAGTTTCTCCTCCAATGCAGAA Gene BVV0102_163526 + 0 NULL GK000017.2:46166825-46171528 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077152 TCONS_00077151 1 XLOC_046996 Coding TCONS_00077151 XLOC_046996 Coding Coding ULK1 17:46170516-46193389 = TSS57747 4978 1 TCONS_00077151_5 1055 28 0.783578174186779 1.83473356560806e-05 0.000213852448510618 3.59898438304891e-05 1.41846912004827e-08 5.55319821923026e-05 6.68211221589422e-05 3.27917293536894e-05 5.71564767474944e-05 4.29622068603183e-10 0.00132989038256512 0.000279594966368394 0.00112294546647146 7.31984846973347e-05 0.000296229424187104 8.16870380359481e-05 0.000367703382274784 0.00295386147830499 0.000695525165601981 0.000276562582952251 0.00182890532225053 8.29313589927145e-05 0.00025947752813389 0.000493887156365633 0.000601845014231875 0.000396655120105661 0.000130205059163712 0.000107838034482421 0.000538334933750173 0.00049385119653451 0.00121844382559 NM_001205927.1 ULK1 Bos taurus unc-51-like kinase 1 (C. elegans) (ULK1), mRNA. 0.0 7153 100.00 0.79650462032945 NM_003565.2 ULK1 Homo sapiens unc-51 like autophagy activating kinase 1 (ULK1), 0.0 4024 88.01 0.639212535154681 TCONS_00077151_5 sp|O75385|ULK1_HUMAN ULK1_HUMAN Serine/threonine-protein kinase ULK1; 0.0 1797 90.34 0.999052132701422 4 coding 0 0 0 0 -0.0538672647644966 0.669929102749967 0.0208882220942708 0.740558525757046 AGTCGGATCCGAAGCTAGGGTCCGAGCCCGGGTCAAGATCGGATTGGAGTCGAATCGCGTCCGCATCCCGGGCTGCCCGATGGGGTGCGCCCCCTGCCTACCGCCCCCGGTCTGTGCCGTCGCCTGAGCCCCGGCCTGCCTGGCCCCGTCCGCGCCATGGAGCCCGGCCGCGGCGGCCTGGAGGCCGTGGGCAAGTTCGAGTTCTCGCGCAAGGACCTGATTGGGCACGGCGCTTTCGCCGTGGTCTTCAAGGGGCGCCACCGCGAGAAACACGACCTGGAGGTCGCCGTCAAGTGCATTAATAAGAAGAATCTCGCCAAGTCTCAGACTCTCCTAGGGAAGGAAATAAAAATCCTCAAGGAATTGAAACATGAAAACATCGTGGCTTTGTACGACTTTCAGGAAATGGCCAATTCCGTCTACCTGGTCATGGAGTACTGTAACGGCGGGGATCTGGCCGACTACCTGCACACCATGCGCACACTAAGCGAGGACACCATCCGGCTCTTCCTGCAGCAGATCGCGGGCGCCATGCGGCTCCTGCACAGCAAGGGCATCATCCACCGGGACCTGAAGCCCCAGAACATCCTGCTGTCCAACCCCGGCGGGCGCCGCGCCAACCCCAACAACATCCGGGTCAAGATTGCCGACTTCGGCTTCGCCCGGTACCTGCAGAGCAACATGATGGCAGCCACACTTTGTGGCTCCCCCATGTACATGGCCCCAGAAGTCATCATGTCCCAGCACTATGACGGGAAGGCAGACCTGTGGAGCATCGGCACCATCGTGTACCAGTGCCTGACAGGGAAGGCGCCGTTCCAGGCCAGCAGTCCCCAGGACCTCCGCCTCTTCTACGAGAAGAACAAGACGCTGGTCCCCACCATCCCCCGGGAGACCTCAGCCCCGCTGAGACAGCTGCTCCTGGCTCTGCTTCAGCGCAACCACAAAGACCGCATGGACTTTGATGAGTTTTTCCATCACCCCTTTCTGGATGCCAGTGCCACTGTGAAGAAGTCCCCTCCTGTGCCCGTGCCCTCGTACCCGAGCTCGGGGTCTGGCAGCAGCTCCAGCAGCAGCTCCACCTCACACCTGGCTTCCCCACCGTCCCTGGGGGAGATGCAGCAGGAGCTCCAGAAGACCCTGACCTCCCCGGCCGAGGCTGCTGGCTTCCTGCATGGCTCCCGGGACTCAGGCGGCAGCAGCAAGGACTCATCCTGCGACACCGACGACTTTGTCATGGTCCCGGCCCAGTTTCCAGGTGACCTGGTGGCTGAGGCAGCAGGTGCCAAGCCGCCCCCAGACAGCCTGATGTGCAGTGGGAGCTCGCTGGCGGCCTCCACAGGCCTGGACAGCCGTGGCCGGACCCCGTCTCCTTCCCCGCCCTGCGGCAGCTCCCTTAGCCCCTCAGGCCGGACTGGCACGTTCTCCAGCAGCAGATGTGGGGCCTCTGTCCCCATCCCAGTCCCCACGCAGGTGCAGAACTACCAGCGCATTGAGCAGAACCTGCAGTCACCCACCCAGTACCAGACAGCGCGGTCCTCTGCCATCCGCAGGTCAGGCAGCACCAGTCCTTTGGGCTTTGCACGGGCCAGCCCATCACCCCCGTCCCACGCTGAGCACGGAGCCGCCCTGGCCAGGAAGCTGTCCCTGGGTGGGGGCCGGCCCTACACACCGTCTCCCCAGGTCGGAACCATCCCTGAGCGGCCAGGCTGGAGTGGAGCACCCTCCCCTCAAGCATCTGAGATGCGGGGTGGCAGGTCCCCTCGTCCAGGCTCCTCTGCACCTGAGCACTCTCCCCACACCAGCGGGCTGGGCTACCGCCTGCACAGCGCCCCCAACCTGTCCGACCTGCATGTCGTCCGTCCCAAGCTGCCCAAGCCCCCTACGGACCCGCTGGGGGTGGCGTTTGGCCACCCACAGGCCAGCCCCCCCCAGCCCTCCCACGGACTTCAATCCTGCCGGCCCCTGCGCGGCTCGCCCAAGCTGCCTGACTTCCTGCAGCGAAACCCCCTGCCCCCTATCCTGGGCTCCCCCACCAAGACTGTGCCCGTGTTCGAGTTCACCAAGACCCCCAGCTCCCAGAACCTGCTGACCCTCCTGGCCCGGCAAGGCGTGGTCATGACGCCGCCACGGAACCGGACGCTCCCCGACCTCTCCGAGGCAGGGCCCTTCCAGGGGCAGCAACTGGGCCCCGGCCTGCGGCCCACCGAGGACACCAAGGGCGCCTTCGGAAGGTCCCTCAGCACCGGCCGCCTCACAGATCTGCTCCTTAAGGCTGCGTTTGGGACGCAGGCTCCCGACTCAGGCAGCACGGACAGCCTGCAGGAGAAGCCCATGGAGATTGCGCCCTCTGCTGGCTTCGGAGGGAACCTGCACCCAGGAGCTCGTGCTGGGGGCGCCAGCAGCCCTTCCCCCGTAGTGTTCACAGTGGGCTCGCCCCCCAGCGGGACCACGCCACCCCAGGGCCCCCGCACGACCATGTTCTCAGTGGGCTCCTCCAGCTCCCTCAGCTCGGCCGGCTCCTCCTCCGCCCGCCACCTGGCGCCCGGGGCCTACAGCGAGGCCACCCTCGAGGTCCCCGCCCCCGGCCACTGCTGCAGCTTTGCCGACCCTGTCACCGCCAACCTGGAGGGGGCCGTGACCTTCGAGGCCCCCGACCTCCCTGAGGAGACCCTGATGGAGCAAGAGCACACGGAGATCCTGCACAGCCTGCGCTTCACGCTCGTCTTTGTCCAGCACATCCTGGAGATCGCGGCTCTGAAGGGCAGCGCCAGCGAGGCGGCCGGGGGGCCTGAGGACCAGCTGCAGGAGAGCGTGGTGGCCGACCAGATCAGCCTGCTGAGCCGCGAGTGGGGTTTTGCAGAGCAGCTGGTGCTTTACCTGAAGGTGGCCGAGCTCCTGTCCTCGGGCCTGCAGACCGCCATCGACCAGATCCGGGCCGGCAAGCTCTGCCTGTCGTCCACCGTGAAGCAAGTGGTGCGGAAACTGAACGAGCTGTACAAGACCAGCGTGGTGTCCTGCCAAAGCCTGAGCCTGCGGCTGCAGCGCTTCTTCCTGGACAAGCAGCGGCTCCTGGACCGCATCCAGAGCGTCACTGCCGAGAAGCTCATCTTTAGCCACGCAGTGCAGACGGTGCAGTCGGCCGCCCTGGATGAGATGTTCCACCGCCGGGAGGACTGTGTCCAGCGCTACCACAAGGCCCTGCTGCTCATGGAGGGGCTGCAGCAGATTCTCACGGACCAGGCGGACGTGGAGAACATCGCCAAGTGCAAGCTGTGCATTGAGCGGAGACTCTCGGCCCTGCTGACCGGCATCTGTGCCTGACCTCTTGGAGGCCCGGCCTGTTGTGCCGAAAGGACTGGACCTTCTCTGCAGATCCATGGGGCGGGGAGCAGTGTGCTGGCCAGGCCGAAAGAGACAAGCCTGTGGCCTTGACACTGCTCGCTGGTGCTGGGGAAAGGACCTCGGCTCCCCACCCAGCGGCCAGAGCCAGGCCTCAAGCCACGTCTCCATCTCCTGGGCTCCTTGGCCATGGACTTCAGGGCGGTGGAGGGCCCCACCCAGAACCTCAGCACAGGCCAGTCCCTTGGCCTGGCTGACAGGCAGAACTCCTAGCCCAGCCAGCGATCTGAACTTCTCTCTCGGCTGCCTCGATGGCAGGTGGGGATGCGTGGGCATCCCCCGACCCCACCCAGACCCCAGGGCTGTCATGCTGAAGACAGAGGTCCTGAGACCATGATGCCCACTCAAGCCAAAGCCGCCAGGCCTGCCCAGTGGATCCACCCAGGAAAAGGTGTATCCTCCTGGCTCCCTCCTCTGCCCTTCCCCGAGACCACCACCCAGCTTTGTGAATCACCCAGCACTTTATGCAGGCGGACTGGACCCGGGGCTGCCACTCGGTCCCGGCTGTTGCACTATGAGGCGTGTGTGCACACCCGTATTCTCGTGTACGTGTATAAACAGCCCCACGAGCACATGTGCTATGCCCGCCACCCAGGACCCTCTTCGGGAAACAGCCGTCTTATTTAAATGTTCTTTTAGGGACGGACAGTATGAAGCACCGAGCTTCCAAAACCCAGCACAGACGTTGCAGTCTTTCACATTTTTCTCCTAAAACGTGTCTTATTTTCTGTAACTCTTTTTTTTTTTTTTAAGAAAACTCATACGAGTTGATGTTTTGTTTTGAAAGGGTGGGAGCAGGGCAGGGACGGCCTCGGCAGCAATGCCGAGACCTGGGGGGGTCTATGGTGCTGGGCGCGTGCGGTCTGCGCTTAGCTGTCTGCCCTACCCTCGCCCTCGTTTCCTGCCTGAAGATGGTGGGCAGGTGATGACCGTATTTGTGCAAAAGCCTCCCAGTCCAGCTTTCACAGTAGGTTTTAACATTAAGTCACCCCACACACACCCAGGTCCTGGCCATATTTGGGGGGTTGGCGGAAAAGCCCTCCTCTAGGCCCTAGGGTGCCCTTCCTTGATCTGCCAGCCCTGCCCAACTTCTCTCAAACCTGTTCACAAGGATGCAGAGGGGGCCCCAGTCCATCACCCACAGCTTTGAGGTCTCACCCCAGGCCTAGGTGAAGACCCTCATTTTTTCTCTCGGTGATACTTGAAATCTTGCCTCCATGCTTGGACCTAAAAGCAAGCAGGCCTGGGACCCCTTTCTGTCTCATCACCAGTGACTTGAGTTTCTCCTCCAATGCAGAATGTGTTCGTATTTATTGCTTTATGATCTGCTGGAATCAGGGCCACTGGGAGGCCAGCGCCATGGGAGTAGCCACTCGCAGCTCTGTTCGCTGTCAGCCTCCCAGGGCACAGGGTGCGTGCTGCCAGCCCGTCCTGTTCTCCATGACACAGCTCTCCTCTCAATCTACCTTAAGAGACGTTTCGTGTGATCCCCACCCCCACACACACACCATTATGTTAAATTGTGTAATATCAATTTAAGGAAATAAACATCTGGATTTGTTGAGCTGCTGTTACT EMBV3_07559 AGCGCTGTTTTCACTGGACCTGCAATGCTCGTTTCCTCTCATTCATCGATTCCATCCACC Gene BVT0102_220327 + 0 NULL GK000007.2:22532989-22560070 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216098 TCONS_00212489 2 XLOC_131168 XLOC_130201 NonCoding TCONS_00216098 XLOC_131168 NonCoding NonCoding LINGO3 7:22555423-22564085 x TSS161253 2889 1 TCONS_00216098_7 186 0.111457251644168 2 0.666666666666667 9.5410867301397e-05 0.000696216214990061 0.0005509476354053 0.000688170074946309 0.000254901819190692 0.000143854956959471 0.000161071526323688 0.000534693010575472 0.000158834023230171 6.66633120257598e-06 1.62595905458877e-09 2.47527054058181e-06 1.51491758984095e-05 0 0 0 0 0 0.000429961193290751 0.0010883238079708 0.000158924933924825 0 3.61730342912652e-06 3.42793346110587e-12 0.000289449674332289 0.000687878317036737 9.90518081711382e-05 5.0279340211387e-06 0 2.19638817940839e-19 XM_005199002.1 LINGO3 PREDICTED: Bos taurus leucine rich repeat and Ig domain containing 3 (LINGO3), mRNA. 0.0 4340 100.00 0.832467982000692 NM_001101391.1 LINGO3 Homo sapiens leucine rich repeat and Ig domain containing 3 (LINGO3), mRNA. 5e-74 284 73.72 0.152301834544825 0 noncoding 1 1 1 1 -0.0976195873372813 0.472689079460672 0.0245200834600639 0.640620155408122 GTGGGAGGGGACAAGGCATGTTGGTTCATGTTGGGGTGGGGGCAGGCAGAGGGGGGCTGGGAGATCCCGATAACACTGACGTTCTATGAGTCCTAACACTGTCCTAACACTGTCGAGAACATACTCCCTCTCGTCATGATGATGCTAAAGGCACTTGGATGTCGTTTTTTGAGGGACCCTCAGGGTTGTCATGGCAACCAAGGTCAGGCGGATGCTAAGGGAAAAAAAAAACTAGTCCATTCTGTTCGACTCTGTATGGGGCTGCTGGACACCCCATTCGGCTCTCCCCACATCCTGCCATGAACGGGGTTGGAGTGGGGGTCCCCACCTGGACTGGCTGTGGTCAATAGCCTGCCACTCTGTCCTGTTGGCCCACAAACACAATGTGGGGCAGGACCAGGGCCTCCTAATGTTTCTAGCCCAGGAAGAGTGGCCAGTGTCCATTCCCAAGTTCTGTCTGAATCCTTTGCTCAAAATTGCCAGGGTAGACACTTTTTTCCTCTGGCTTGTCTCAGAAAGACCTTGAGGAATCCAGAAAACAGGTCAATCATCAAGCTTGTCCATGGGCCTGGCCTCTATGTATGGAGGAATAGGTTTGGCCATCAGACTGATTTTATAGACGTGGACATCAATGGCCTTCAGTTGCCAAGCAAGATTACACAGCTGGGTGAAAACAGAGCCTTCTTACAAGGTCCGTGAGAATACTGTCTAACCTGGTCAGTAGCCAAGCTCCTCTCTGGCTGAGGTCTGGCCCCACAACACTTCCTGTGCCCCTTCCCCCCAACTGTTTGTCTGGCCGAGGTAGAAAGAGTGGGGGCAAGGACCAGGCTAGGGGAGGCAGGGTCATGTATGGCTCCTGTTTGGCATCTGAATGCTTATGCAAAACCTCAGCTCCTGCTGCACATCTCCAGCGACAGGGAACTCACTACCTGTAGAGCAACAGGGCAATGACCTTGGGGCAATGACCTTCTTTCACCTGAGCGACAGTCTTCCTGTGACTCTCCACTCACTGGCCCTAGATCTGCCCCAGTGTTGCAGAGACAAAGGTGCCTCTGTCATCTCCTAATGTCCCAGGTTTGGACTTCCTTGTGGCTTGAACCTCTGTTCCATCCTTGCTCGCTGTCACTGCCCCCACAGTGCACATGACAAAGACCCTCAGAACCATCCAGAGACACTTATCTCCTTCCCAAGGTGAGCAGTGGTCATCAGGGCAGGGGTGGTGCAGACTCAGGACTGAAGGTCATGCCATCTGGCCTGCTGGAAAGGGACATACTGGAAGCAATGCTCCTGGACCAGGGGCCAGGACAGCTGTCCCTCCGGGGTGGCGAGGGCACAGGAAGCAAGCAGCAGCTGAGGGATGGTGGGAGGAACTGGAGGAATGGCTTCTCCTAGCTGGCAGCCCGTCTTGCGGGGCTGGCAGGTCCTGGTGGGAGGGAGTCTGGGTACAGGGACTTGGGCCAGCAGGTCAGGGGCCATCCTGTGTGCTGGACCCCTTCAGGGTGAGCCTGACCAGCAAGACCTTAGCTCAGCACCTGAGGTCTGCATCAAGTGGCCAGCTGAGAGGGAGCCAGGGAACGTCTGGGTGTGAGCAGAAACAGGTCTCAGGTGTGAGCTGCCTGGCCGAGGTGGGAACTGGTCTCTACCAAGAGCCCAAAGCGCCCGTGGTGATCTCGGGGCACCTGCTTAGTGTCAGCTGGGTATGAGGGGGGTGTGTGTGTTCCCCTCTGGATCTGTGCATCGTGGTTGTATGTCCTGGGTGTAAGTATGTGCTCTGGTGTAGTTGGAGGCGGGTATCCAGGTGTGAACGGAGTGGGCTCTCTCATGCTCTGACCCGGAGGCGGGACTGCCTTCCCTGGGATCCCAGGTGTAGACCATCTCCACCAGGTGTGAGTTGTTTTGTGTTGAGGACCCTGGATCTCTGAGCTCCCATCCCACCCTCTCCCAGCTGAGCAACCACACCAGGGGCAGGAAGACAGGGTGACACCCTTAGAAAAAAACGCTTGAGAAACTCTGCAAAAGACGCATCCTGATGAAAAAACAGTTCTGTGGTTGGGTCCCTACAAAAAAACGGGGAAGTTCTGCCAGGAGTCGGCTCGCGGCCGCCCCCTATGGGAGATGCATAGGTGGTCTTCAGATGGGCCAGCCGCCATCCGGTGAGGGCTCGGACGGAGACGGAGACGCTGCTTCCGGCGCAGGCGCAGCGGCTGGGGCCGCGGGCGGTGGGCCCTGAGGCCTCTCATATCATCTTCATGTTGAACTTGCGGGCGCCCCCCTGGCCCGCCGCGGCGGCGGGCCCGTCCACCTTGCGGAAAGAGTACTCCACCGAGAAGTTGTTCTTGTGCTGCCCGCGGCCGCGGCTCCACACAAAGAGCAGCAGGAAGCAGAAGAGGACGACACCCAGGAAGGCAGGAGAGAGTCTTGGCAGTTCATCCGGCTAGGATTCAAAACACAGCGCTGTTTTCACTGGACCTGCAATGCTCGTTTCCTCTCATTCATCGATTCCATCCACCTGTCAGTCAACAAACGTCTACCGTGCCAGGCATCTTCCAAGTGCTGGGGACACAGAGTGCCTGAGACAAACAGGTCAGCTTTCTGGGAGCCGACAGATAATAAAAGAGGTAAATACAGGCTCTTCTACCTCCGGCGGCCATAAATGAAGAGGAATAAATCAGGAAGATGACAGCGGGGTGTCGAGGGGATTGTAATCATTATCATCAATTTACTGAGGAAAGATGGTGTGCAAAGAGTTAGGGAGGGAGAGAGGGGGCCTAGCAGATGGGGGGCAGCAGGACCGGGCCAATCAGCCCAGGAGGCTGGGAGCAGGCACTGTAGAGAGAGGAAGGTGGACTTTCTATCTACAAACTTAAAAAATATTAAAAAAAATTTTTT TCONS_00212490 r 5' 4164 TCONS_00212490 r 5' 0 EMBV3_30360 CCGTTCTCAGGACCTCACCCAACGGTAACGTTTCTCCAGCTATCAGTATACTCATTTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08424 ACTGGAAGAAAGGGCTCCCATCAAAGCCCCACTAAAAATTCCGTTGGTGCTATCAGAGCC Gene GeneID:508497|FTSJ3:NM_001075362:215_cdna Constitutive 0 NULL GeneID:508497 19 GENE FTSJ3 MGC140597 FtsJ homolog 3 (E. coli) EMBV3_18428 CACCACATTGGGGAATGCCACCCTCTTGGTTTAATCTCTCTAACAAGCATACTGGTGGGG Gene BVV0101_020336 + 1 EMBV3_00359 GK000020.2:24478234-24570225 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116548 1 XLOC_070715 NonCoding TCONS_00116548 XLOC_070715 NonCoding NonCoding - 20:24528552-24529294 - TSS87016 742 2 TCONS_00116548_1 44 0.42722371967655 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.001014456021216 0 0 0 0 0 0 0 0 1.97410663004603e-06 0 0 0 NM_001103327.1 NEPN Bos taurus nephrocan (NEPN), mRNA. 1e-67 260 90.48 0.253369272237197 0 noncoding TTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTTAATGGACATGAGTTTCAGCAAACTCTGGGAGATGGTGAAGGAGAGGGAAGCCTGGCGGGCTGCAGTCCACGGAGTCACAAAGAGTCGGACAGGACTGAGTGAATAACAACAATATCCTAAGAGAAGTATTAAAATGGGTAAATGATTTTATCCTCTTTTTCACAGGCATTTGCATTTTAAAAGAGGAAGACCAAGATTCTGGAATTGGCTTTGCCAATTGCAGTACTATTTGCATTACCCAAGAAAGAGAAGGGACTGTAGAGGTCAGAGACCTTCCCAGCTAATGGTCACCCCCTATTTTGACCACAGGCCAGTCCAGCAGCCAAGAAGAGCTTTGGGAAGCAGGAAGGGAAGACAGACCCCACTGTAGAAACACCACATTGGGGAATGCCACCCTCTTGGTTTAATCTCTCTGACAAGCATACTGGTGGGGGTGGGAGGTAGGTTAAGAGGAGCAAAAACACTTTAAGAGAAGTCTGAGGATCTATCTTGCTTTTTGAAATCAAAACCAAAGTTGACATCCTACTGTATAGCACATGGAACTTTGCTCAATGTTATGTGGCAGCCTGGATGGGAGGGAAGTTTGGAGGAGAATGAATTCTTGTATGGCTGAATCCCTTCGCTGTTCACCTGAAACTATCACAACATTGTTAATC TCONS_00114841 TCONS_00114842 TCONS_00114843 TCONS_00114844 TCONS_00114845 TCONS_00114846 TCONS_00114847 . 3' 39844 TCONS_00114841 TCONS_00114842 TCONS_00114843 TCONS_00114844 TCONS_00114845 TCONS_00114846 TCONS_00114847 . 3' 40585 EMBV3_00472 GCCTGCCACCTCTGTTGGCTAGGCAGTTTTGTACACTTTTTTGAAATATGTAAAAATTAT Gene GeneID:533788|PPP2R5A:NM_001081728:87_cdna Constitutive 3 NULL GeneID:533788 16 GENE PPP2R5A MGC138101 protein phosphatase 2, regulatory subunit B', alpha isoform EMBV3_18098 TCCAGGACAGGCAGCGCCCATCGATCCACATGAAAGGAGAGGAATGACTGATGTAACAAG Gene BVV0102_062645 + 0 NULL GK000002.2:30531193-30642214 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104968 TCONS_00104969 TCONS_00104967 1 XLOC_062481 NonCoding TCONS_00104967 XLOC_062481 NonCoding NonCoding - 2:30548055-30577633 - TSS77593 1111 3 TCONS_00104967_4 64 0.193519351935194 3 0.962538458937688 0.00658013966350705 0.00454533031545122 0.00256391293912807 0.00158830977498426 0.000428372523414915 0.000301868316441795 0.000937574946551885 0.000958279509103806 0.00120731081243927 0 0 1.93105215756481e-05 1.29109955822319e-05 0.000406465525687149 6.08630434329392e-08 0 0 0 0.00381956223043673 0.00194403793992551 0.00107338520010545 0 0 0 0.00715333914824728 0.00672298916257144 0.00534991474562916 0 0 0 XM_003586954.2 PPFIBP2 PREDICTED: Bos taurus PTPRF interacting protein, binding protein 2 (liprin beta 2) (PPFIBP2), mRNA. 1e-13 82.4 84.34 0.0702070207020702 0 noncoding 0 0 0 0 -3.19029028785957 0.0163966520416201 -0.0172136183525509 0.737598068309557 GCAGGGAAAATTTTTTATCTATCCTAATCTTATTCAATTACAGTGAACTATGGGGAGCTATCCTAAGCTGTCCAGAAGTTATCTATTGAAACTACTGTCATCACCACTGTGTAAACCTTAAGCCTCAGCAGTTAACTGCTGTGTGTAAGAACATGCAGAGGGTGAAAATCTATTCTGTAAGTAATTTATATTCAAAGAAAAGATTTATACATTTTAAAATCTTACACTGCCAACAAATAATTCAGCCACCTTTTTTTGTTGTTGTTTTTTAAATTTAAGGCAGGGGATAAACTCTTTATTTTTTTAAATTGTATTTTCTATCACTTTAATATTTTTTTTTTTAATATGGAGCCCAAGTCCCATCAGGCTTTATTTTGGGGCCACACCACAGCATGCGAAACTTCCCTGACCAGGGATTGAACCCAAGCCCCCTACAGTGGAAGCGCAGAGTCTTAAAGTACTTAAGACCTCCTGAACCCACAGCCAGGTCTGGACACAGCCTGTCTGCTGATGGGAGCAGCTGTATCCCTGCCATGTTAATTGCTTGATGTGAAGTCTCTCAGCACTGGGGCCTACAGGTTATTGGGTAGAGGCAGGTGTTGACACTGATGTACTGGAGGGAAGGTTTTGAAATTCACCGTCAGCCTCTGCGTGCACCAGCATCCACGCCAGGTTTCGCTCCCAGGATCAGTTGCTGCCAGTGCCTATGTCCCCAGCATGAGCCACAGGCGACTTCCACGTCTCCAGGAGACTCTCCAAGACCAGCAGGAAGACAAGGCTGAAGGGTCACCTAGCACCACAGTCCCTGTGGGCTCAGCTGAGACCTGTCTCGTGACTTCATCCCAGTCCAGTCCTGCTTCCCTCAATCCCATAACAGTGTTATCCTCAAGAGGACTCCTGCAGATGGTCTGATTCTCCTGGTGACAGATGGAAGTCCAGGACAGGCAGCGCCCATCGATCCACATGAAAGGAGAGGAATGACTGATGTAACAAGACCAGCATGACACAAGAACTCTTCAAAGCACACTTTTTACTTCTCTGATTCTTAAGAGATACCTTTTGGTTGAACTGTAGATATTCCTTTCCTATTACAATTTTAGTTCAGAACCAA TCONS_00102044 TCONS_00102062 TCONS_00102063 TCONS_00102064 TCONS_00102065 r 3' 16864 TCONS_00102044 TCONS_00102062 TCONS_00102063 TCONS_00102064 TCONS_00102065 r 3' 17071 EMBV3_18982 GGGATCTAACTGTGCAGTAGACATCAGAGACTTTTCATTCAATCTTGTATCCCAGACAGC Gene BVT0102_095405 + 0 NULL GK000011.2:82033655-82693610 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12307 ATGTTAGAAGAAATATCCAAAAAGATACAGTAGCTGCTTGTCTCCTCCTATACCTGTCGG Variant GeneID:615282|CDKN3:NM_001040582:134_cdna 238^357 2 EMBV3_34469 GeneID:615282 10 GENE CDKN3 MGC133531 cyclin-dependent kinase inhibitor 3 EMBV3_39503 GAAATTAGAGCAGTTTGTCTCCCTTCTTATGGCTAGCATTCCAGTGTCAGGGCACACCGG Gene GeneID:493724|NP:NM_001007818:31_cdna Constitutive 0 NULL GeneID:493724 10 GENE NP PNP nucleoside phosphorylase EMBV3_31740 TCATCGTGAAAGCCATGAGTGATTACTGGGTTGTTGGGAAGAAGTCTGACCAGAGGGAGC Gene GeneID:511088|C25H7orf28A:NM_001075492:140_cdna Constitutive 0 NULL GeneID:511088 25 GENE C25H7orf28A C7orf28A MGC139572 chromosome 7 open reading frame 28A ortholog EMBV3_37063 TGGCTCTCAGTGATCGCTCATCCCCGCTGGACTTTGGTTCCGTGGTGCACATGGAGTGTA Gene BVV0102_286768 + 0 NULL GK000018.2:10427785-10439484 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085376 TCONS_00085378 TCONS_00085379 TCONS_00085381 TCONS_00085384 TCONS_00085380 TCONS_00085383 TCONS_00085377 TCONS_00085382 1 XLOC_051856 Coding TCONS_00085380 XLOC_051856 Coding Coding MBTPS1 18:10392376-10437213 j TSS63777 4205 1 TCONS_00085380_7 721 0.0107015457788347 23 0.906726737443126 0.000107606481662365 1.38662460989634e-12 3.07431995970414e-09 1.51587730927967e-14 2.67355313113297e-15 2.14469125522522e-20 4.72457973664807e-18 8.57706030308843e-05 3.97793458810969e-10 0.000230811440101523 8.95698790921665e-11 2.16628758378085e-05 9.4192016991111e-55 6.03015930313086e-09 2.19109547443542e-13 0.00313687411085703 6.85208372860668e-61 0.00319157463877672 5.95497584073519e-05 2.36074884596104e-71 1.13140091743273e-30 0.00016792233099365 3.98225012642254e-07 0.00111592528612668 6.38276571637062e-10 0.000222578942891525 1.20672044047946e-09 0.000590147363320374 0.000281027670544417 8.34396818303262e-30 XM_005218389.1 MBTPS1 PREDICTED: Bos taurus membrane-bound transcription factor peptidase, site 1 (MBTPS1), transcript variant X1, mRNA. 0.0 7467 99.62 0.988822829964328 NM_003791.2 MBTPS1 Homo sapiens membrane-bound transcription factor peptidase, site 1 (MBTPS1), mRNA. 0.0 4293 86.17 0.861593341260404 TCONS_00085380_7 sp|Q14703|MBTP1_HUMAN MBTP1_HUMAN Membrane-bound transcription factor site-1 protease; 0.0 1446 95.28 0.998613037447989 1 coding 1 1 1 1 -0.018142088045279 0.903761468886434 -0.0149791016309047 0.760145751482054 GAGTAAACAGCACCGAATGGAGACCCGAGGCGTGTTTGCGGCGGAGGCGCCGTTATCCCGGGCCCAGCAGACCCGAGCCTGAGGCGGCCGCAGACTGGCTCTCAGTGATCGCTCATCCCCGCTGGACTTTGGTTCCGTGGTGCACATGGAGTGTAGGACTCAGGGGTCTGGGCCAGAGTGAGCGAAGCCTGAGGCCCAAGATGGAGAAGAAACGAAGAAAGAAATGAAAGCCTCGTTTCAGGCCAAGCCACAAGAGGCCATGAAATTTAACTTTTATTTACGTTGGACAAGACTGTAAAATGGCGGATCAGTAATGTTTCAGCTGAAAGCTGAAACAAAAATTAACTTATAATCAAGGAAGAAAAAAGTGCGATTTGAGTTTATGCGATTTTATGACCATACTCACTTACGACCATGAAGCTTGTCAACATCTGGCTGCTTCTGCTGGTGGTTTTGCTCTGCGGGAAGAAGCATCTGGGCGACAGACTGGAAAAGAAACCTTTTGAAAAGGCCCCGTGCCCTGGCTGTTCCCACCTGGCTTTGAAGGTGGAGTTCTCCTCAACGGTTGTGGAATATGAGTACATTGTGGCTTTCAATGGATACTTTACGGCCAAAGCTAGAAATTCATTTATTTCAAGCGCCCTGAAGAGCAGTGCAATCGACAACTGGAGAATTATACCTCGAAACAATCCATCCAGTGACTACCCTAGTGATTTTGAGGTGATTCAGATAAATGAGAAACAGAAGGCGGGGCTGCTGACTCTCGAAGACCATCCGAACATCAAGCGGGTAACACCCCAGCGGAAAGTCTTTCGTTCCCTCAAGTACACAGAGGCAGAGCCCGGCTCGCCCTGTAACGAGACCCGCTGGAGCCAGAAGTGGCAGTCCTCACGGCCCCTGCGCAGGGCCAGCCTCTCCCTGGGCTCCGGCTTCTGGCATGCCACTGGGAGACACTCGAGTCGGCGGCTGCTCAGGGCTATCCCGCGCCAGGTCGCCCAGACGCTGCAGGCTGACGTGCTGTGGCAGATGGGCTACACAGGCACTAATGTAAGGGTTGCCGTGTTTGACACTGGGCTAAGTGAGAAGCACCCCCACTTCAAAAACGTGAAGGAGAGAACCAACTGGACCAATGAGCGAACGCTGGACGACGGGTTGGGCCATGGCACGTTCGTGGCAGGTGTGATAGCCAGCATGAGAGAGTGCCAGGGATTTGCTCCCGATGCAGAACTTCATATTTTCAGAGTCTTTACCAACAACCAGGTCTCCTACACGTCCTGGTTCCTGGACGCCTTCAACTACGCCATCCTGAAGAAGATTGACGTACTGAACCTGAGCATTGGCGGCCCCGACTTCATGGACCATCCCTTCGTCGACAAGCTAACAATGTCATCATGGTTTCTGCCATTGGCAATGACGGGCCTCTTTATGGGACTCTGAACAACCCTGCTGACCAGATGGATGTCATCGGAGTGGGCGGCATCGACTTTGAGGACAACATCGCCCGCTTCTCCTCGCGGGGAATGACCACCTGGGAGCTGCCTGGAGGCTATGGCCGCGTGAAGCCCGACATTGTCACCTACGGTGCTGGAGTGCGGGGCTCGGGCGTGAAAGGGGGGTGCCGGGCCCTCTCGGGGACCAGTGTGGCTTCCCCGGTGGTGGCCGGTGCTGTCACCTTGCTGGTAAGCACAGTCCAGAAACGTGAACTGGTGAACCCAGCCAGCATGAAGCAGGCCCTGATCGCGTCCGCCCGGCGGCTTCCCGGTGTCAACATGTTTGAGCAAGGCCACGGCAAGCTGGATCTCCTCCGAGCCTATCAGATCCTCAACAGCTACAAGCCCCAGGCCAGTTTGAGCCCCAGCTACATCGACCTGACCGAGTGTCCTTACATGTGGCCCTACTGCTCCCAGCCTATCTACTATGGGGGCATGCCGACTATCGTCAACGTCACCATCCTCAACGGCATGGGAGTCACGGGGAGGATCGTGGACAAGCCCGAGTGGCAGCCCTACTTACCGCAGCACGGAGACAACATCGAGGTCGCTTTCTCTTACTCCTCAGTGCTATGGCCCTGGTCCGGCTACCTGGCCATTTCCATCTCTGTCACCAAGAAGGCTGCCTCCTGGGAAGGCATCGCGCAGGGGCACGTCATGGTCACCGTGGCTTCCCCGGCAGAGGTGGACTCAAACAGTGGTGCAGAACAGACGTCCACAGTGAAACTGCCGATCAAGGTGAAGATCATCCCCGCCCCTCCCCGGAGCAAGCGCGTCCTCTGGGACCAGTACCACAACCTGCGCTACCCGCCTGGCTATTTCCCCCGGGACAACCTGAGGATGAAGAACGACCCTCTGGACTGGAACGGTGACCACATCCACACCAACTTCAGGGACATGTACCAGCACCTGAGGAGCATGGGCTACTTCGTCGAAGTCCTTGGGTCCCCCTTCACGTGTTTTGATGCTAATCAGTACGGAACGCTGCTCATGGTGGACAGTGAGGAGGAGTACTTCCCGGAGGAGGTGGCCAAGCTGCGGAGGGACGTGGACAACGGCCTCTCACTCATTGTCTTCAGTGACTGGTACAACACATCCGTGATGAGGAAAGTCAAGTTTTATGATGAAAACACGAGGCAGTGGTGGATGCCGGACACCGGAGGAGCCAACGTCCCAGCCCTGAACGAGCTGCTCTCAGTCTGGAACATGGCGTTCAGCGATGGCCTGTACGAGGGGGACTTTACCTTGGCGAACCATGACATGTATTACGCGTCGGGGTGCAGCATTGCTAAATTTCCAGAAGATGGCATCGTGATAACACAGACATTTAAGGACCAAGGACTGGAGGTCTTGAAGCAGGAAACGGTGGTGGTTGAAAACGTCCCCATTTTGGGGCTGTACCAGCTCCCAGCTGAGGGCGGCGGCCGTGTCGTGCTGTATGGAGACTCCAACTGCTTGGACGACAGTCACCGGCAGAAGGACTGCTTCTGGCTCCTGGATGCACTCCTGCAGTTCACGTCGTATGGGGTGACGCCCCCCAGCCTCAGCCACTCGGGGGCTCGGCAGCGCCCCCCCAGTGGAGCAGGCTCGGCAGCCCCGGAGAGGATGGAAGGGAACCACCTGCATCGGTACTCCAAGGTCCTGGAGGCCCGGCTCGGAGGCCCTGAGGCGCGCGCACTGCCGGCCTGTCCGCACCTGTCGTGGGCCAAGCCACAGCCTTTAAACGAGACGGCTCCCAGTAACCTTTGGAAACACCAGAAGTTGCTCTCCATTGACCTGGACAAAGTGGTACTGCCCAACTTCCGATCGAATCGCCCTCAAGTGAGGCCCTTGTCTCCTGGAGAGAGTGGAGCCTGGGACATTCCTGGAGGGATCATGCCTGGCCGCTACAACCAGGAGGTGGGCCAGACCATTCCCGTTTTCGCCTTCCTGGGAGCCATGGTGGTCTTGGCCTTCTTCGTGGTGCAGATCAACAAGGCCAAGAGCAGGCCGAAGCGGAGAAAGCCCAGGGTGAAACGCCCACAGCTCGTGCAGCAAGTTCACCCGCCAAAGGCCCCCTCGGTGTGACGTCCCCCCGGCCGGCCGTGAGAGCCAGGGAGCGCCTTCGCGGGCAGCCATGGGGCGGGTGGAGCCGTGGGGTCTGAGGGGCCCCGGCTCGAAAGGGCTCAAGCCTTCAGCTGGGCGTCTGCAGTAGCTGAGAGCCTATGCTGCACGGGGCTGGGGCCACTGGAGGGCCCCGAAGGGCAGCCTGGAGTCAGACCTCGCCGGCTGCCCATGCACCAAAGACTAAGACGACGTCTAAAGGCTATTGGGGAGGAAGCAGCTCTGACCAAGCCAGACGTGCTCCATAAAGGCTATTTTCTATATTTATTGTTGGGGAAAAGTCACTTTAAAGACTTGTGCTGTTTGGAAGCAAAGCTATTTTTTTTGTCAATGGAATGCAGTTTTTTACTATTTCATCATGAGGACTAACACAGATGCTGCGATCTCCTTTTTGATGAAAGAACAGACTGAGATTTGAAAGAAACTTGCACAAATCTGTGAAACATAGCCCTTTGCTTTATTTTTATAAGTATCAACTGCCATCATGTTTTGTAATTTGGGTCTTGATTTCACCATTGTCGGTGAAGAAAATTTTCAATAAATATGCATTACCTGTATGAAGCTAAGGGGCTTCCTACGTGGCTCAGTGGTAAAGCATCTGCCTGCCAATGC EMBV3_02257 CACAAACCAGACACCAGGGACCTAGCAAATTCAGGAGCATTGGAAAACACAGCTTTTCCG Gene GeneID:527219|DMRTA1:XM_002689545:16_cdna Constitutive 0 NULL GeneID:527219 8 GENE DMRTA1 NULL DMRT-like family A1 EMBV3_32405 CCCAGGGCATGGAACCTGAGTCTCTTTATTTGCAAGCAGATTATTTATTGTTGAGCCACC Gene BVV0102_107940 + 0 NULL GK000004.2:41641277-42490909 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187079 1 XLOC_113127 NonCoding TCONS_00187079 XLOC_113127 NonCoding NonCoding - 4:41937974-41938892 - TSS139447 918 2 TCONS_00187079_5 74 0.953159041394335 1 0 0 0.000109460160624619 0.000100806036445388 1.80917718079963e-05 0.000301178082428809 7.79316952534375e-06 6.35262791838792e-06 1.28860929581453e-05 0.000111733958364775 0 0 0 0 0 0 0 0 0 2.34343709163555e-05 3.13351944110435e-05 0 0 0 0 6.03789592898212e-05 0.000115121940867139 1.2765035326641e-05 0 0 0 XR_228745.1 LOC101903387 PREDICTED: Bos taurus uncharacterized LOC101903387 (LOC101903387), 2e-40 170 81.31 0.209150326797386 0 noncoding 0 0 0 0 -0.186224444607209 0.252292649729036 0.0156252017947082 0.743441356830276 ATTTTCGTTGCACTGTTAAAGTAAGAAAAGGAGAGGAGCCGATGCTCCTTATTAGTGATGACTGGGGAAAAGTGAATGAAAAGCATCACCAGACTCACCTTGCACCAGTCAGAAGGGACTTCCTCAAAAAGTCTACAAACAATCCTTGAGGGAGAGAATGGAGAGAAAACAGAAGTCTCCTGCACTGTTGGTGGAGGGGTAAATTGGTAATGATCTCTGTGAAGCCAGAAAAAAGGATCCATGGAAAAGTATAAATAAAGCTACCATACGATTGGGCAATCCCACACCTGGCTGTACCTCTGTTGAAAACCAGACATGAAAAGACACGTCCCACTCAGGGTTTAATGCAGCACTGCTTAGGACCCCCCAGCATATGGAAGCAATGAAAATATGCATCTGTTGTGGAATGAAGAAATAAGTTGTGTTGCAGGTGAATAATGGACAAATGTGTGCATGCTCAATCACTTCAGTTGTGTCCAACTCTTTGAGATCCCATGGACTGTACCCTGCCAGGTTCTTGTCCATGGGATTCTCCGGGAAAGAACACTGGAGTGGTAGCCATTCCCTTCTCCAGGAAATATTCCCTTCCCAGGGCATGGAACCTGAGTCTCTTTATTTGCAAGCAGATTATTTATTGTTGAGCCACCAGGAAAGCCCCACTGTGCAATAATACTCAGCTAAAAAAGTGAGTAAATACTGCCAGTTGTTGAAGCATGCGTACACCTAAACACGATCACTTTAGTAAGTCAGTCAGAGAAAGACAACAAGCATATGATATCACTCATTGGTGGAATTTAAGCATCAATAGGAATGAAATAACTTCTGAAATAGACTCAGAGTCACAGAAATCTAGCTTATACTTAACAAAGGAAAAAGGTCAAAAGGAGGTATATTTTGGAAGTTTCGGATTGACACGTA TCONS_00183741 TCONS_00183742 TCONS_00183743 TCONS_00183744 TCONS_00183745 . 3' 540695 TCONS_00183741 TCONS_00183742 TCONS_00183743 TCONS_00183744 TCONS_00183745 . 3' 541612 EMBV3_06142 AAGACCTGCAGATGTCCCTCCTGCAAGAAGAGCTGCTGCTCCTGCTGCCCTGTGGGCTCT Gene GeneID:100295020|LOC100295020:XM_002689477:8_cdna Constitutive 0 NULL GeneID:100295020 8 GENE LOC100295020 NULL hypothetical protein LOC100295020 EMBV3_15569 GACATAGCACCAGGTGACATGCTTGACAAGGTATCGAGCAGGGGCAGGTCCTGTCTTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36774 ATCTGTGTTATTTGGACCACTTCAGGCTTTACAGATGGCTCACTCCATTCCTAGGTCACC Gene GeneID:504287|SOAT1:NM_001034206:43_cdna Constitutive 0 NULL GeneID:504287 16 GENE SOAT1 MGC127378 sterol O-acyltransferase 1 EMBV3_25632 TTCATAGAAACGCCAAAACAATAATGTCGGCTGGCACAAATCCAGAAACTCGGGCTCTTG Gene BVV0102_037691 + 0 NULL GK000008.2:62044731-62079193 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232113 1 XLOC_141599 NonCoding TCONS_00232113 XLOC_141599 NonCoding NonCoding - 8:62070274-62071249 - TSS173617 975 1 TCONS_00232113_1 123 0.081025641025641 1 0 0 0 0 0 0 0 0 0 0 0.000156139359683674 2.34788269142392e-06 8.43495068923691e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000118217255687492 9.9581688430994e-06 0 0 noncoding CCTAAGTCTAAGGCCAACAATTTATTTTAAGCAAAGTCAAAGTTGTACACACTAGCTAGATACAAATAGCAGACCACTCTGACTTAGGTCAGATCAGAACAGGGGAAGTTCAGACTACATCACACTACAATGGGCGTGATGATTTATCTCATTATCTTTGGGCAAAGCTATAACATGTTTAATCCTTTGAAGGGTGTCCCATTGTATGAAACTGGCAGTCTTGATGTCTGTCAAAAAGTAATCAAAAGCCCGAGTTTCTGGATTTGTGCCAGCCAACATTATTGTTTTGGCGTTTCTATGAAACAGTTAAGCCTTTCAAAGGAGTGTAACAGCTTTCTACAAGAGCATGCTGTCTCTCTTATTGGTACAAACATCACTTGCCACATGGAAATTTTGTTTTTAAATATGTGCTTAAAATACAAGAACATAATTTGTAAACTGCATCTTTCTGCCCTCACCTCATCTATGCCTGCCTCTATCCCACCGCTAGATGTGCACTGATTTTTCTCCTACATTAGAAAGGACCTGCGCATCTTTGCATTCTGGCACATGGTTGGTATTTATTGTAAAATGATAAGTACACCTACATCATCTCCTTAACCGTGTGAACGTTATTTCCCTTGTGTTATAGAAAAGTGAGGCTCAGAGTGATTTGTCCAGGGTCAATATAGTAGACATCTGTCGTTCCTTTTTGGCTGTCCAGTATCTGAATTCATGCCTACATTTGGGAATTCCCCATCCTATGAACTTGCTGGCAATCAGAGCATGCCTTTCACTACAGAAGCTGAAATTGATTTTTTCTTTACTTTTCCATGTGACCCTGATGCTATAAATTAAATATTCCTTGGACTTGGAATCAGAAATACAACAAAGTTTTATCTTGGAGTAATTCTCTATGGCAACCATAGCAAATGCAGCAAGATGTTTTCTGAGCAATACTGGCTGCCATGATAGTCCAGGGACCTCTGGCTTGGT TCONS_00227882 . 3' 2904 TCONS_00227882 . 3' 3878 EMBV3_22737 GGAAGAGAAGTGCAAGTATGTGATATCCAGCTGCAACACCATTTTGAATTTGAATACCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24144 CTAAAGTTCAGGCATCTCTGGCAGCAAACACTTTCACCATTACGGGCCACGCTGAGACAA Gene GeneID:281031|BTF3:NM_001025314:103_cdna Constitutive 1 NULL GeneID:281031 20 GENE BTF3 MGC128310 basic transcription factor 3 EMBV3_30188 CCAACATCCGTCTGACTCTGGAGAAGAGATTTCAAGATAACCCCAAACCCAGCTCTGAGG Gene GeneID:516493|POU2F3:XM_002693030:257_cdna Constitutive 0 NULL GeneID:516493 15 GENE POU2F3 NULL POU class 2 homeobox 3 EMBV3_04197 GGTGCTCAGTGCAAATACTGGACATTTCTGTGGGAATCATACCAGGGGTTTATTGATGGA Gene GeneID:505775|SLC16A1:NM_001037319:62_cdna Constitutive 2 NULL GeneID:505775 3 GENE SLC16A1 MCT1 MGC128991 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) EMBV3_35317 CATCTCAGCACCTGGCCCTTCCACCCCCAGGTTTCTTGGCGGCCTGCTTGCTTTGTCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18501 GTTGGGTTTGAGTTAAAAGAGCACTGTAGCCTGGAAATAAAGGTTTGAGAGTCAGCAACA Gene BVV0102_153179 + 0 NULL GK000010.2:38538843-38814388 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06539 AGGAATCTTCCCCGATGCCAGTAGAAACCAGGTCCATCAGGCCTCTCACACCCTTGTTTA Gene BVT0102_351917 + 1 EMBV3_07648 GK000027.2:266109-288916 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04636 GTTCGACGACCTGTTTGAGAACATGCACAAGGAGAAGATGCTGCGCGCCAAGATCCGTGA Gene GeneID:515581|LOC515581:XM_002688476:7_cdna Constitutive 0 NULL GeneID:515581 6 GENE LOC515581 NULL similar to transcriptional adaptor 2 (ADA2 homolog, yeast)-beta EMBV3_05391 ACACTACCTCTTGTGGATAGACTTGACTAATATGCACTTAGAAGAGGACTGAGAGAAGCC Gene BVT0102_101442 + 0 NULL GK000002.2:44755255-44763139 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36037 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24647 TACAAGTTCGCCGGGCAGATGGGGATCCAGTTGTTTGAGACCAGCGCCAAGGAGAACGTT Gene GeneID:614521|RAB35:NM_001098127:261_cdna UTR3_Alt 2 NULL GeneID:614521 17 GENE RAB35 MGC139264 RAB35, member RAS oncogene family EMBV3_22540 CCTTCAGTCTTTCCCCAGAGTTATCCAGAAAGAATCCCATGATTGCACCTTTTCAGCCAC Gene GeneID:100337102|LOC100337102:XM_002686632:26_cdna Constitutive 0 NULL GeneID:100337102 4 GENE LOC100337102 NULL DDC protein-like EMBV3_40995 TGGAGAACAGGCAGAAGCTGTGGGCAGACGAGCTGCGGAGAGAGTATCATGAAGAACAAA Gene GeneID:615924|UCMA:XM_002692098:305_cdna Constitutive 0 NULL GeneID:615924 13 GENE UCMA NULL upper zone of growth plate and cartilage matrix associated EMBV3_14066 GAATTGAAGAGGGAGTTGAAAGAGGAAGGAGTCAAGCTGTCTGTCCGGGAGGTCACTCAG Gene BVT0102_119380 + 0 NULL GK000017.2:62581167-62886621 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075809 TCONS_00075808 1 XLOC_046654 NonCoding TCONS_00075809 XLOC_046654 NonCoding NonCoding - 17:62738744-62740684 - TSS57057 1040 1 TCONS_00075809_1 116 3 0.465188241361527 0.0158923808613373 0.0108689550248792 0.0114395160952463 0.0112934572858764 0.0187388400752306 0.00627408612121989 0.0148675657417837 0.013244589977968 0.0206688270420872 0.00704226895757324 0.000287889222981565 0.0009927681221122 0.00620047139978159 0.00711088695350246 0.00467705641748849 0 0 0 0.00826187325705412 0.00809861078201078 0.00486803220064918 7.70802507855555e-05 0.000623313430257815 0 0.0113630548679604 0.011667849909252 0.0110720090409563 0.000456896573472776 0.000441807496261203 0.000415194833585423 0 noncoding 1 1 1 1 0.508739384919024 0.0209512527288515 -0.499877453656476 0.0214636911609338 CTGGAGCTTGCCATCCTTTTAGGGGAAGGGTTGGGGGGGATTTGTCTTTTCTACAAGGAAGCTTTTTTAGGCTCTGACACCCCTACAAGCCTTTGCCTGTCCTCCAGGGGCTGTGAAGGGAATTGAAGAGGGAGTTGAAAGAGGAAGGAGTCAAGCTGTCTGTCCGGGAGGTCACTCAGCTAGCCTTCTTCTCTTCTTGATTTCAAGAAATAAAAAGCTACTTTTAGGCATCTCAAAGTTCTCCCTGAGGTCCTGTCTACGGCAGGACCCCAGCCTCTGAGCAGTCTGTGGGCTCCACATGGGGCGTGTTGACTATAATAGGGAAATGCGATGGGAAAAAATGGAGTTTCTATTTCTACTAGCGGGGCTGTCTGACCAGAGAGGGCACTCTCGGTGAACCTGCTCCTCTTCCAGTCCAGTTCCTCCAGGGCAGTACTCCGCGCTGGCTACTATGTAACCTTGTAAGGATGCTGGGCTCTGAAAGCCTACCTTCCAAAGCATGCAAGGAGGGACAGAAGGTGGAGAATGTTAATTACAGCTCAACTTTGGACAGCTGGGAGCAGCTCCTGACATGGGTTAAAAGCTATCTGGGTTTTCTCTTTGGGGAAGGAAAAGCTTTTGGTCACTACAACCTTACAATGTTCTACCTCGGCACCCTGTGGACCCAGTGGAGGTCAAGACAACTTATGCCAAGTTGTGGGAGCCCCTTTCCTACAAAAAAAGCTAATTTGAGAACACCCTTGAAAGGGCCCAACGCTCCCATCCCCAGGGCCCACCTTTCAGCACAGCTGGGACTAAGTCCAGGGACCTGGGAGTAGATTTGTGCCCCATGGGTCCCCCCCTGCTTGACTAACCTCTAGTGTGAGGCTTACCCCACTCTTAAGGTCTCAGCTGCTGTTGGGGGTGTTACGTTTGCAGTAGACTGAGATTTTCGTAAGCTACGAAGTCTGTCATTAAGCCTCAACTAGTTCTACCTGAAGTGAAGTTCTCTTAACCCCGTCAAGCGTTGTAGGGCCCCCTCTCAGTTTATTTTCATGTTC TCONS_00075811 s 5' 145871 TCONS_00075811 s 5' 147810 EMBV3_16329 TGCCACTTCACGGTTCAGCAAGGCCCTTTTTCCAGAAATCCTCAACCTACCTGGACTACT Gene GeneID:514963|AMHR2:XM_002687239:111_cdna Constitutive 0 NULL GeneID:514963 5 GENE AMHR2 NULL anti-Mullerian hormone receptor, type II EMBV3_18551 ATTTGCAGGTCAGAACCTAACACGAGCAGCGGCAGGCAGCAGGACAGCGTTTATCAGGAT Gene BVV0102_269691 + 0 NULL GK000003.2:121059554-121063489 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07853 CCCAGAGAAACAAAGTATGCATTTAGTCCCTGTGTACTCTGCCCCTCAAGCTCAATTGTT Gene GeneID:516065|ANKRD6:XM_002690181:55_cdna UTR3_Alt 3 NULL GeneID:516065 9 GENE ANKRD6 MGC137780 ankyrin repeat domain 6 EMBV3_21995 CATTGTCACAGAGAGCCTCAACACCAGCCAGTGGCTCCATCTCCAACATGTATGCAGTGA Variant GeneID:516241|LOC516241:XM_002687241:63_cdna 412^518 3 EMBV3_37770 GeneID:516241 5 GENE LOC516241 NULL similar to cysteine sulfinate decarboxylase EMBV3_24053 ACTCCAAGAAATCCGGAAGTTTGCCATGAAGGAGATGGGAGCCCCGGATGTGCTCATTGA Gene GeneID:783541|LOC783541:XR_084154:13_cdna Constitutive 0 NULL GeneID:783541 X PSEUDO LOC783541 NULL similar to mCG49427 EMBV3_32605 GCTGCTGTCAAGCTGGCTGATTTTGGCCTAGCCATCCTCACAACCATGCTTGTCTCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39028 CTCCCAGGAAGCGTGACAGGTGCTCTGTCTGCCTCTCTCCTGCTCTTCACTTTAGATCCA Gene GeneID:783508|LOC783508:XM_002695667:5_cdna Constitutive 0 NULL GeneID:783508 19 GENE LOC783508 NULL similar to ULBP27 EMBV3_35088 CTGTCTTTAAGAGAAAGAACTCAGGAGGAGATTCTGCAGTCAGAGACCAGGAAACTCACC Gene BVV0102_340365 + 0 NULL GK000019.2:41715066-41720233 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01657 GGACAACGTATATCACCTCGACTGCTTCGCCTGCCAGCTCTGCAACCAGAGATTTTGTGT Gene GeneID:527152|LMO1:NM_001075895:146_cdna Constitutive 0 NULL GeneID:527152 15 GENE LMO1 MGC142594 LIM domain only 1 (rhombotin 1) EMBV3_03635 CACTGCTGGCCAAGCTGAGTTTCCTACCAGAGTCACACACAAGTCTGCCTAAAAACGTAC Gene BVT0102_301559 - 1 EMBV3_28821 GK000029.2:50747162-50768652 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36206 GGAGTACCAGTCCTATTCCCAGTACCAGTCTTGCCATTCCTGCACTTATGGGGACCAGGA Gene GeneID:615859|LOC615859:XM_002698948:56_cdna Constitutive 0 NULL GeneID:615859 28 GENE LOC615859 NULL similar to Putative uncharacterized protein C10orf73 EMBV3_17108 ACAATGATAAGACGCGCTACATGGGGAAAGAAGCTGAACGTCGTGGAGCAGGAGAAGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06783 GACTTTGAACAAACTCTAGGAGATGGTGAAGGACAGTGAAGCCTGGCATGCTGCAGCCCA Gene BVV0102_152591 - 1 EMBV3_11138 GK000003.2:119811247-119842343 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189379 1 XLOC_115418 NonCoding TCONS_00189379 XLOC_115418 NonCoding NonCoding - 4:92363498-92363666 - TSS141747 168 1 TCONS_00189379_1 35 0.994047619047619 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00102484927064933 0 0 0 0 0 0 0 0 NM_001102188.1 SGCB Bos taurus sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA. 9e-55 215 89.02 0.970238095238095 0 noncoding GTCATGTCCAACTGTTTGTGACCCCATGGACTGCAGCATGCCAGGCTTCCCTGTCCTTCACCATCTCCCAGAGTTTGCTCAAACTCATGTCCATTTAGTTGGTGATGCCATCCAAGCATCTCATCCTCTGTAGCTCCCTTCTTTTCCTGCCTTCAATCCTTCCCAGCA TCONS_00184816 . 5' 31509 TCONS_00184816 . 5' 31509 EMBV3_40797 CAGCAGCAGCTTACCAACCTGCAGATGGCAGCTGCCGTGGCCGCAGCTGCAGCCACAGCC Variant GeneID:512824|PUF60:NM_001046133:74_cdna 229^888 2 EMBV3_26180 GeneID:512824 14 GENE PUF60 MGC128460 poly-U binding splicing factor 60KDa EMBV3_02007 GGGGACACCTACCTTGGAGTGGTTGTAAATAAGACACTTGAACGCAGAGCCTAGCACTTC Gene GeneID:282470|SLC11A1:NM_174652:32_cdna Constitutive 0 NULL GeneID:282470 2 GENE SLC11A1 NRAMP1 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 EMBV3_27955 GGTCACCAAGATGCTGGCAGTGGTTGTCATCCTGTTTGCCCTTTTATGGATGCCCTACAG Gene GeneID:281549|TRHR:NM_174203:8_cdna Constitutive 0 NULL GeneID:281549 14 GENE TRHR NULL thyrotropin-releasing hormone receptor EMBV3_03229 GATCTACTCTCTCAGCAACTTTCACATATGCCATACAGTATTTTTAACTCCATGCTGTAC Gene BVV0102_150849 + 0 NULL GK000002.2:12963731-13455250 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01411 TTACTCCTGGTCTGATGATTTTCCCCATCTGAAATCCACAATACTGCAGGAGCCCTCTCC Gene GeneID:786612|PJA1:XM_002700048:9_cdna Constitutive 1 NULL GeneID:786612 X GENE PJA1 NULL praja ring finger 1 EMBV3_31408 TAGCTGTGTTCCAAACCACCAGTGTCCCAGTTCACCACGATGACTAAGGCAAGCTTCCAG Gene GeneID:534645|SNRNP40:NM_001046382:133_cdna Constitutive 0 NULL GeneID:534645 2 GENE SNRNP40 MGC128126 WDR57 small nuclear ribonucleoprotein 40kDa (U5) EMBV3_21258 GGGTCCGACTGGGCAGGAAGAGCCGTCTGGGGATTGAGACGATTCCATGTTATAATAGAT Gene GeneID:281342|MYOC:NM_174118:64_cdna Constitutive 1 NULL GeneID:281342 16 GENE MYOC MGC128941 myocilin, trabecular meshwork inducible glucocorticoid response EMBV3_03821 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04293 ATTCGCTTTGAACCTAAGAGTGTGGGGGACTCTATCCGCTTGGGCCAGTTTACCTCCAGT Gene GeneID:407148|ART5:NM_001104964:134_cdna Constitutive 0 NULL GeneID:407148 15 GENE ART5 NULL ADP-ribosyltransferase 5 EMBV3_10360 TGCAGGGAGGTTGAGTGCACCACATATTCAGAAATATGCACCATGGAGTACCTACCTCAC Gene GeneID:100296105|LOC100296105:XM_002689303:160_cdna Constitutive 0 NULL GeneID:100296105 7 GENE LOC100296105 NULL hypothetical protein LOC100296105 EMBV3_24371 AAGAAGGCAGCGGAGGACAGGAGCAAGCAGCTGGAAGATGAGCTGGTGTCGCTGCAAAAG Variant GeneID:100336949|LOC100336949:XM_002690878:299_cdna 673^998 1 EMBV3_34009 GeneID:100336949 10 GENE LOC100336949 NULL sarcomeric tropomyosin kappa-like EMBV3_37247 TCTCTCTGGAAAGGCTTTTCTTTCATCATGTTCACAAGTGCTGGTTCGGAGGGTGCTGGG Gene GeneID:317711|COL4A3:NM_001166529:49_cdna Constitutive 0 NULL GeneID:317711 2 GENE COL4A3 NULL collagen, type IV, alpha 3 (Goodpasture antigen) EMBV3_29991 GACCTCGAAGCCACATTTAGACTTCTTGTGAATATGGCTTTACACTAGGAAATGTGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43210 TCCTATCATATGGGAATTGGCAACCACATCCTTAAGGCAAAGTTTGAGGTGGACCAGCAG Gene BVT0101_045872 + 0 NULL GK000002.2:92358569-92490400 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26141 TGTAGAATGGGGGTCCTGGTCTGTGATGTCTCGTTTTGCCGTGTGTCGTTGTGTGTCCAT Gene GeneID:510831|NRSN1:NM_001075469:71_cdna Constitutive 0 NULL GeneID:510831 23 GENE NRSN1 MGC139805 neurensin 1 EMBV3_34305 GTCTGTCGTTGTGTCCTGTGCGGGCATCACCAGTGGATACATCACAGGGGCATCAGTGGA Variant GeneID:532422|HSD17B8:NM_001046324:146_cdna 331^742 3 EMBV3_29070 GeneID:532422 23 GENE HSD17B8 FABGL HKE6 hydroxysteroid (17-beta) dehydrogenase 8 EMBV3_31344 TGATGCTGTTGTAGCACTAGAGCCTTTGTGTGGAAGACAGTGAGGCGTGCAGCGTGTCAA Gene GeneID:511451|CAB39:NM_001046087:94_cdna UTR3_Alt 2 NULL GeneID:511451 2 GENE CAB39 MGC137705 calcium binding protein 39 EMBV3_18899 GCACTCAGCCCGCACCGAAGCCAGGACACGCTTCGTTTAAGTCTTAACCGGTGATAAATA Gene GeneID:506201|EVL:XM_002696836:653_cdna Constitutive 2 NULL GeneID:506201 21 GENE EVL NULL Enah/Vasp-like EMBV3_07248 CACTCCTGGACTGAGTGGGATCAACCTGACAACCTTCGTTCAGCCTGGCTGTGACAATGT Gene GeneID:768046|KRTAP3-1:NM_001077104:240_cdna Constitutive 0 NULL GeneID:768046 19 GENE KRTAP3-1 MGC139941 keratin associated protein 3-1 EMBV3_24728 GTTGCATATCCGAATTCTTCAGTGCTCAATCCTCAAACCTGCGCAAAACAGCTCTCCTCC Gene GeneID:539114|CBLN4:NM_001081537:1234_cdna Constitutive 0 NULL GeneID:539114 13 GENE CBLN4 MGC154968 cerebellin 4 precursor EMBV3_08168 GCTCGTCAAAAGAGTGTACAAAGGTGGTGCAGCTGAGCAAGCAGGAACAATAGAAGCTGG Gene GeneID:516852|PDZD2:XM_002696404:176_cdna Constitutive 0 NULL GeneID:516852 20 GENE PDZD2 NULL PDZ domain containing 2 EMBV3_32074 GCTTGTGTATTCTGTCACCTCTCTGCATAGACAGGGAGGTCCAGGCTGTTGAGGGGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18297 TTCCCGCCCCTCTCCGGGGACGGGTTCCTGACTTGTAAAGAAACTAAAGATGTTAGCGCC Variant GeneID:360193|PNO1:NM_183085:23_cdna 247^396 2 EMBV3_34056 GeneID:360193 11 GENE PNO1 NULL partner of NOB1 homolog (S. cerevisiae) EMBV3_38454 GAGATTAAGCGATATGAATCCCAGCTCCGAGACCTAGAGCAGCAGTCAGAACAACAGAGG Gene GeneID:509914|PFDN6:NM_001075421:101_cdna Constitutive 2 NULL GeneID:509914 23 GENE PFDN6 MGC142467 prefoldin subunit 6 EMBV3_11882 CAGGTCTGTGTGAGACTGGTGAGTACAGCCTGGTTCTTTGGGCTGATCAATGGCATCCTT Gene GeneID:505576|LOC505576:XM_002687351:40_cdna Constitutive 0 NULL GeneID:505576 5 GENE LOC505576 NULL similar to olfactory receptor Olfr286 EMBV3_36811 CCTGTTCAGGTGCTCCTTCAGGGGTTTAAGATAATTTGTGTGACTTTCTCAGCAATAGCA Gene BVV0102_286045 + 0 NULL GK000007.2:32313013-32329449 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12222 ATGCTGGGTCTTTGTCCCTGTGTGTGGGCTTCCTCTAGTTGCAGTATGAGGGCTTCTCAT Gene BVT0102_139698 + 0 NULL GK000011.2:1014326-1156935 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32642 CTCCAAGGTGTGCAGCAAGATGGGGCTGTGGAGCATCCTTTGCAACCAGATGATGAAGAA Gene GeneID:616323|LOC616323:NM_001046578:143_cdna Constitutive 0 NULL GeneID:616323 11 GENE LOC616323 MGC140060 similar to granulysin isoform NKG5 EMBV3_18344 GTCGTTTATGGCTTTTATTCTGTTGAGGCATGTTCCTTCTATACCTGCTTTCTGGGAAGT Gene BVV0102_261776 - 0 NULL GK000008.2:86689387-86801736 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28355 GAACAGTGCCATCAACCCCCTCATCTACTGTGTTTTCAGCAACTCCATATGCTTCCCCTG Gene GeneID:519486|NPSR1:XM_002686821:75_cdna Constitutive 0 NULL GeneID:519486 4 GENE NPSR1 NULL neuropeptide S receptor 1 EMBV3_08231 GTACTGCAGTCCAGGTAATGTCCTACCTAGCTATATTGCCGATAATGATAAATATAGGAT Gene BVT0102_410781 + 0 NULL GK000017.2:67174359-67222564 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077965 TCONS_00077974 TCONS_00077962 TCONS_00077975 TCONS_00077956 TCONS_00077959 TCONS_00077970 TCONS_00077966 TCONS_00077977 TCONS_00077964 TCONS_00077957 TCONS_00077967 TCONS_00077972 TCONS_00077963 TCONS_00077973 TCONS_00077969 TCONS_00077958 TCONS_00077960 TCONS_00077961 TCONS_00077971 TCONS_00077968 TCONS_00077976 1 XLOC_047185 Coding TCONS_00077961 XLOC_047185 Coding Coding PIWIL3 17:67221258-67248093 j TSS58121 4461 1 TCONS_00077961_2 888 21 0.83453827234106 0.00170194174209745 0.00237826096956506 0.000762733055045862 0.00087287286249302 0.000525047199901477 0.000202519733320056 0.000327534383311142 0.000528421496023458 0.000482600385545112 1.72824162067351e-05 6.97650463747042e-19 2.47332854091364e-12 2.32440306926075e-18 8.07578204500264e-05 3.0080337165439e-172 7.50385999268273e-17 1.01955856840535e-61 1.90071855500897e-17 0.000923754089600025 0.00158868963643971 0.000359472615165433 3.59902059903542e-267 3.31026412362822e-51 1.71314287432626e-55 0.00115016108656643 0.00107545045774357 0.000534648973354534 1.13450791009574e-12 5.1003268797956e-62 8.03030740142026e-55 XM_867297.4 PIWIL3 PREDICTED: Bos taurus piwi-like RNA-mediated gene silencing 3 (PIWIL3), mRNA. 0.0 4008 99.73 0.501232907419861 NR_045649.1 PIWIL3 Homo sapiens piwi-like RNA-mediated gene silencing 3 (PIWIL3), 0.0 1077 69.07 0.619367854741089 TCONS_00077961_2 sp|Q7Z3Z3|PIWL3_HUMAN PIWL3_HUMAN Piwi-like protein 3; 0.0 907 52.26 0.97972972972973 2 coding 0 0 0 0 -0.289692925527777 0.216261789608271 -0.000352669070399853 0.994003205635567 ATGGCTGAGAGGCAGGATCAGGTGGGCCTGAGGGCAGGCAGAGCAGCCCCTCAACCCCTCCCACCAACACTGGGAGCATCGCTCAACTTCGCCAGGTGCGACTCAGAGTCGGCTGCACTTGGGCCGAGATGGAGGCGGCGCCGGAAGAGGCGGGGCAGCAGGGTTGAAATTGAAATTGGGGTGGGCCCTGCTGGCGGGGGCGGTGAGGTACGTCCCGCAAGGCAGTCGGGCTTGTCCTCTCTCCAGTCCCACCTCTGCTTGGTGACTGCTTTGGGGGCACAGGACTGTGTCCTGAGGAGGGATAACTCTTTTGGAAAGGAGGTCTGCACCTCTAACCCCGCAGAAATTGGTGTTCAGACACCGTGGGGCTAGAGGAGAGGGACCCGAGGGCACACAACTGTGGGCGCATCACACACAGATCTTCCTAATCTCAGAGGAGGAAAGACGGAAGGCCTCTCCCCTTCAGGGCCATCGGATTCAGGACAGCGATGACCGGCAGGGCCAGAGTTCACGCCCGAGGCAGACGGCGGGATACACCACCCTCGGAGCCCGCTCAGCCCGAGGCGGCGAGGGGACACCCAATGCCTCCAGTGCCCAGGACAGACCCACCACTGAGCTTCGCTGACTTAGTGAGACGCGGCACAGCGGCTCAGCAGCCTCGTCAAATCCAGCCTAGACTCCAGTCATTGACAGGTGTTAGACACGTGGCTGAGGCTGGACCACCAGCAGGAGCAGAAGCGACGTCTCAGCCTTCAGAAGAACTTAAACCGGCATCTGAATCACAGGAATCCTTGCTGAGGAAGAAGAGGGATGTTGGTAGAGATTATCGAGACTTTGTGGTAAATACTCGGCAGAATTTGGTCCACGTTAGAGAGTCGACAAAGGGCACGCAAGGTAGCCCGGTAATGCTATTTTCGAATCATGTCCGGCTCAAGTCTTGCTCTCAGAGGCATTTATACAAGTACAACGTCATCTACACGCCAGACATAGAGGATGGACGCAAACGGGAAGCTTTACTCTCTGAACTTGAAAAGTTACTGGGAAACCGTTGTATATACGATGGAAACTCTTTGCTGTTACCTCACTCGCTAGGGGAAACGAAAAAGGAAGTGGTCAGCAAGTTGAAAAATGAACCTGTGAAGATAACCTTCGAGCTCTCCAGAGAACTCCAGACCACTTCTCCAGACTGCCTCCGCTATTACAACATTCTCTTTAGAAAAATGTTGGAGAAGATGGATTTGAACCAAATTGGTCGCAACTATTACAATAAAAATAAGAAGACTGAGTTCAACGAGTATAGGTTGGAAATATGGCCTGGCTATGTTACTTCTATTCTTCCATATGAAACTGGTCTTACTCTCTGTGCTGATGTGAGCCACAAACTGCTCCGAATGGAAACTGCTTATGACTTAATATCACACACTCGTGAAAAAGCCAGAGGAGAAGATGCCAAAGAGAAAATTCTTAGAAAATTAGTTGGGTCATCTGTTCTTACAAAGTATAACAACAGAACCTACAGAGTGGATGATATTATTTGGGAGATGTCTCCCAGCTCTACATTTACCAAATCAGATGGCAGTGAAATCTCCTTTGTAGACTACTACAAGGAGCGGTATGGTACAGTGGTCACTACCTTAAATCAACCACTTTTGATCACCAAAGGCAAATGGAAAAAGAGCCGACAGGACACACCTCATCAGCCTATCATGCTGGTTCCTGAGCTGTGCCACCTGACAGGCTTAACGGATGACATGCGTAAAGACTACAGAATGATGAGAGACTTGTCCACCCACACGAGGATGGATCCTGATAGAAGGCAGCATAAACTGCTCACATTTATGGATGCTTTAAGAAAAAATAATACTGTGCAGAAGGAGCTTCGAGACTGGAATTTGGAACTCGAGGAGGGGTTTTTGTCCTTTTCTGGAAGAACTCTGCAAGATGTAAGAATTCACCAAGGAAGAAGGATGTTTGACAACCATAAAGCAGACTGGTCAAAAAACACAAGGGAGGCACCATTACTTAGAGCAATGTCACTGGATCATTGGCTAATAGTCTATACTAAGGGAAATTATGAAACAGCCCTGACCTTGCAGCAGAATCTACAGAGAGTGACACCCAAAATGGGCATAACTGTGAGAAATGCAAAACTGCTTGAAGCAGCTGATACAGTCCAATCTTACATAAGAACCTTAGAAAAACATGCTTCACAAAAAACACAGATGGTCCTTTGCCTGCTGCCCACTGACAACAAGGAAATTTACGATGGCATAAAAAGATACCTGTGCATCAATTACCCAATTCCAAGCCAGTGCGTGTTGAAACGGACCTTGGATAGACCTAAGACGCCAGTGACCATCGCTACAAAAATTGCTCTGCAGATGAACTGCAAGCTGGGAGGTGCCCTCTGGAAGGTGGACATAGGATTGCAGAACGCAATGTTCATCGGTATCGATTGTTTCCACGATATTGAACGTCGACGGAAGTCAGTCGCGGGATTTGTGGCAAGCATCGATCCAGACCTGACGCGGTGGTTCTCTCAGTGTATCATCCAGGAGTCGGGGCAGGAGCTTGTCAAGGGGCTGACAACCTGCTTGTATACTGCCCTGAAGCTCTGGTCTGAACAAAATTCATCTCCGCCACGTTCTATCATTGTGTATCGAGATGGAGTGGGAGACGGACAGCTTCAAGCGCTCATAGATCAAGAAGTAAAACAGATGGAGTCCTACTTAGAGAACTCTTACAGAGGACAAAAGGTCAGACTAACTTTCATCGTGGTGAAGAAACGAATAAATACCAGATTTTTTATTGAAAAGGATGGAGGGAGACTTAACAATCCATCTCCAGGAACAGTTATTGACCTAAAGGTGACTAGGACAGAATGGTATGATTTTTTCATTGTGAGTCAGTCTGTGCGGGAAGGTACTGGGACTGTCACTCCTACTCACTATAACGTCATCCACGACACGCTGTACTTGAGCCCGGATGCGGTCCAGGGTCTCACTTACAGACTCTGCCACATGTACTACAATTTTTCGGGTATCATCCGAGTTCCTGCTCCTTGCCATTATGCCCATAAACTGGCTTACTTGGTGGGCCAGAGTCTTCATCAACAACCACACGAATCTCTGTCAAAATCTCTCTTTTACCTTTAACCTACAGAAGAAAGCACAATGGGATGCTGAAAAACATAATCTATACATTTATCTTCTCATGTTGCATCTGTACACCTGAAATATTTTTTCCAGATGTATGATCAGAATTTAAAACCGTTCTTGACATGGACGAGCTTCAGAGATGTTAAGCTATTTTCAACAGGATCACTAACTTAAACATGAGGCTTCTCTTCTCCAGGTGGGAGAACTGACAATGAAGTTTTTGACTCACAATTTACCTCTCAAATCTGCTACATACACTTTATGATTCAATGTGCCTGAGACCTCTACTCCAAGTAAAGCTGCTATAATTGTAAAGGTTGGGAATTAATCACATGAAGAATAAGTCTATGAACAAGTAAATTCTACTTGGAAAAATCATACCTATTTTTGAAACAACCTTTTCCTTAAGGACAGCAAAGATTTAACAGTGGCAAAATTAAATGGGAATTTGTGTTTCACATTTTGTAAGGAAGAAATAGCCTATATGTGAAACAGTTTATTCTTTGTACCCATGTAAGAATCAATTTTTTTTTTTTTCTGGTGGAGCTGTAGTATGGATTTAAAAGTTGGAAGCTCAGGAACATAACATTTTGTCATTTTCCCACAAAGAAGGTAAATTAAGGGCTTTGTTAGCATTTGTTTAATTCATTCTCTTCTGCATGTTCTAAATGTGACATTATTGTGATAGCTGTACCATCATCAGAAGATAAGCTGTTTAAAGTTGTCATGTTTTTCCTGAAAGCAGACATTTTTTTCTCTCTCCACACAAACCTACCTTTAAATATACTTAAGAGACAGTAAGTGAAACTTTTATTTTCCTATACTTCTAAATGGAGTGGTATTTTTTTTTTTTTTTTGAGGTGGGGTGGTTAGGGAGAATACACTGGCTTTGAATATATCCAAAAGGATATGCTTAAAGATAATATAATTGCTTTGATTATAGGTTATTCGTTTAGGTTTGAAACTGTCTTATAAGAAAATGAAAACAAGTTATTTAAATGTACTGCAGTCCAGGTAATGTCCTACCTAGCTATATTGCCAATAATGATAAATATAGGATATGGTCTCCATGATTAAAGATAACATATTCTCTTCTAAAACTAGAATTTGATTTATGATAATACATTTATGGTAGCAGGTTTCTAGAGATCTACAGAAATCACTTGGAAGGAACAAATTCAAAGTAATAACTTTCTGAATGTTTCCTATAAATGCAATACAAATATCATTTATTTGTAACACTATAATTTCTAGACTCATACACTTAAAATGTGACTCAATAAAGGTATTCATGTTAAAATCA EMBV3_36646 TGCTGCTTTCTCTCATTCAGCAATACGTGCCATGTGCAGCTACCCTGCTACTCACTGAAC Gene BVT0102_234115 + 0 NULL GK000008.2:48954465-49123161 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32046 CTGAAGACCCTGATGCTGCAGATTGCAAAGCAGGACTTGTGCCGACAGCTCCACGCTCGT Variant GeneID:511094|TNNI3:NM_001040517:157_cdna 330^434 3 EMBV3_06540 GeneID:511094 18 GENE TNNI3 NULL troponin I type 3 (cardiac) EMBV3_23311 CTTCCAGAGGCTCAACTTCTTGTACCAGGATCCAGAGAACCAGGCGCTAGCGAGATTTTA Gene GeneID:615278|RPP21:XM_002697334:265_cdna Constitutive 0 NULL GeneID:615278 23 GENE RPP21 NULL ribonuclease P/MRP 21kDa subunit EMBV3_22910 AGACACCAGAAAGTAACTTCTTTTTCCTCCACTGGACTGCCCTTGGCCACCTCAGCAGTA Gene GeneID:100297800|LOC100297800:XM_002689305:166_cdna Constitutive 0 NULL GeneID:100297800 7 GENE LOC100297800 NULL similar to esophagus cancer-related gene-2 EMBV3_07706 AAGGAGTGTTCATGGTCTCAGGCTCCACTTAGCAGAGGCTTCTGTGGGTTGTCTGAGCAA Gene GeneID:100313289|MIR2378:NR_031300:13_cdna Constitutive 0 NULL GeneID:100313289 23 GENE MIR2378 bta-mir-2378 microRNA mir-2378 EMBV3_41652 TTTCTCCAAGTATTCCATGAACAGACACAAGATGACCACACTGACCCCCGCATACCACGC Gene GeneID:513400|NADSYN1:NM_001034443:269_cdna Constitutive 0 NULL GeneID:513400 29 GENE NADSYN1 MGC127343 NAD synthetase 1 EMBV3_09777 TTGCCTGTGTGGACCTGACCACGAAGCCCAAAGGAAAATGGTTCTGTCCCCGCTGTGTTC Gene GeneID:614733|ING5:NM_001040580:35_cdna Constitutive 0 NULL GeneID:614733 3 GENE ING5 MGC133862 inhibitor of growth family, member 5 EMBV3_03479 TCTGAAATCAGAGGTAGCCTGCGGTTCCTGTCTCAACTGGAGATGAGGCCCTCTTCCAAT Gene BVT0102_027776 - 0 NULL GK000025.2:18835489-19145718 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201120 TCONS_00200854 TCONS_00186491 TCONS_00054133 TCONS_00142473 TCONS_00218950 TCONS_00231771 TCONS_00162302 TCONS_00189709 TCONS_00131534 TCONS_00123275 TCONS_00156651 TCONS_00063805 TCONS_00186556 TCONS_00021875 TCONS_00240372 TCONS_00255144 TCONS_00158397 TCONS_00131539 TCONS_00098199 TCONS_00240374 TCONS_00131532 TCONS_00032734 TCONS_00131535 TCONS_00149042 TCONS_00222181 TCONS_00111145 TCONS_00232767 TCONS_00131533 TCONS_00222182 TCONS_00063813 TCONS_00231768 TCONS_00186557 TCONS_00217532 TCONS_00129560 TCONS_00207145 TCONS_00218944 TCONS_00186834 TCONS_00011614 TCONS_00098203 TCONS_00229646 TCONS_00131531 TCONS_00230828 43 XLOC_122768 XLOC_122505 XLOC_112543 XLOC_031942 XLOC_086898 XLOC_132269 XLOC_141259 XLOC_099184 XLOC_115747 XLOC_080239 XLOC_074829 XLOC_095111 XLOC_038531 XLOC_112608 XLOC_012548 XLOC_147036 XLOC_158076 XLOC_096851 XLOC_080244 XLOC_058445 XLOC_147038 XLOC_080237 XLOC_018972 XLOC_080240 XLOC_090919 XLOC_135490 XLOC_067045 XLOC_142251 XLOC_080238 XLOC_135491 XLOC_038539 XLOC_141256 XLOC_112609 XLOC_131531 XLOC_078273 XLOC_125663 XLOC_132263 XLOC_112885 XLOC_007165 XLOC_058449 XLOC_139141 XLOC_080236 XLOC_140318 NonCoding TCONS_00186557 XLOC_112609 NonCoding NonCoding - 4:28981025-28981694 - TSS138925 669 2 TCONS_00186557_2 107 1 0 5.04003842825042e-05 1.65220881881981e-05 2.6347800294678e-05 7.67128918004173e-05 8.04618190590629e-05 6.67340001743376e-05 5.02366887481601e-05 3.23543833301851e-05 0.000114776353102677 0.000100904156947909 2.52179144529941e-05 5.85168111144673e-05 9.65431640714993e-05 0.000139283126129092 0.000217891737511642 0.000570913133593805 0.000109102723715775 0.000139862620326037 5.3594374410669e-06 0.000294426402091814 6.63550157869369e-06 4.15164045014223e-05 9.51539900942328e-05 5.25334629035089e-05 1.81238148793375e-05 3.33537756756119e-05 2.66257992959201e-05 1.82949026561345e-05 0.000135697002898516 9.73582836758597e-06 XM_002698950.2 FRMPD2 PREDICTED: Bos taurus FERM and PDZ domain containing 2 (FRMPD2), 3e-11 73.4 78.32 0.212257100149477 0 noncoding 1 0 1 1 -0.00615637206504964 0.968424672851612 -1.02613056179786 0.00497382998682155 CAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGCTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAACACGAAGGGGCAGTTTTTCCGTGCATCGTTCGGAAAAAACCCCAGGTTCCAAATACAGCTCGACAAGCGGCCTCTCTCCCCGGGGACATCTCGAGAGGCAAGCGGAGTTCCATGCCTCAACCCAAGACGAGGCCTGACTCTCCTGTCCCCAGTCTGCAGGGACCCTGCGATCGGAGTCTGAAATCAGAGGTACCCTGCGGTTCCTGCCTCAACTGGAGATGAGGCCCTCTTCCAATGCACCAAGCCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGGCTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGCCCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAATGATGCGCTCCCCCTCGCCACTCGCA TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 EMBV3_34094 TGGAGGAGAACAACAACTTCAGCCGTCTGGCCGAGGAGAAGCTCAACTACAAGATGGAGC Gene GeneID:511110|STMN3:NM_001083666:985_cdna UTR3_Alt 2 NULL GeneID:511110 13 GENE STMN3 MGC151650 stathmin-like 3 EMBV3_41611 GGTGGGAGGCACATCCTTTCAGAACCCTTTCCGAGTCACAGATGAGGTCGTTGACTACAT Gene GeneID:515575|TPP1:NM_001075718:37_cdna Constitutive 0 NULL GeneID:515575 15 GENE TPP1 MGC140229 tripeptidyl peptidase I EMBV3_24262 TGCCCGAGTGAAAGCCAAGGGAGCAGCTGTCAGAGTGGACTTGGAAACAATGTCATCAAG Gene GeneID:540544|UGT2B15:XM_002688332:212_cdna Constitutive 0 NULL GeneID:540544 6 GENE UGT2B15 UGT2B4 UDP glucuronosyltransferase 2 family, polypeptide B15 EMBV3_19542 TAGAGGCAGATCCTTTGCGGGGCGAGTCAGAAGGCACTGCAAGAGCAGGGGGAGATCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22348 TTCCCTGAACTATGATTCACTTGCCACGGAACAGCTGGGCCCGTGCACCACAGCTATTGA Gene BVT0102_443089 + 0 NULL GK000019.2:26296312-26638784 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092900 1 XLOC_057018 NonCoding TCONS_00092900 XLOC_057018 NonCoding NonCoding - 19:26557459-26558355 - TSS69814 694 2 TCONS_00092900_1 69 0.693083573487032 2 0.226815642458101 0.0210498876243092 0.0186682784309696 0.0157443518953105 0.00846335797811185 0.0126286852980438 0.00459880955907718 0.00464500691340306 0.00573986860236002 0.00313307350035394 2.37146510301505e-05 0.000481585250745107 0 0.00157514230264042 0.00285241556117791 0.000969176822095866 0 0 0 0.029793634941272 0.0520025126726547 0.0189504819776313 0 0 0 0.0242519859501993 0.0325061078227536 0.0382070801113223 2.76805682952303e-05 0 1.73263817338977e-05 NM_001192736.1 GLA Bos taurus galactosidase, alpha (GLA), mRNA. 5e-85 318 89.16 0.354466858789625 0 noncoding 0 0 0 0 -0.676871175862981 0.0368757929015917 -0.071581840634599 0.334555202192455 CTCACCTATGACTTGATCAGTTCAGTTCAGTCACTCAATCGTGTCTGACTCTTTGTGACCCCATGGACTGCAGCAAGCCAGGCTTCCCTGTCCATCACCAACTCCCGGAGCTTGCTCAAACTCATGTCCACCAAGTTGGTGATACCATCCAGCCATTTCATCCTCTATCGTCCTCTTCTCCTCCTGCCTTCAATCTTTCCCAGCATCGGGGGCTTTTCAATGAGTCAGTTTTTGCATCAGGTGTCCAAAGTATCGCAGCTTCAAAGTATTGACTTGATCAAGGTGTCTTAAAGGGTGGAGACTCCTCTGTTATGGGAACAGCCCACAGCACACCAGCCCAGCAGACAGATGTCCTGGGAATAAGCAGACTGGTAATTTGCACAGCTCTGTCCTCTCATTCCAAACAGCATCCCGGAAGCTTCCCTGAACTATGATTCACTTGCCACGGAACAGCTGGGCCCGTGCACCACAGCTATTGAGCCCGTGCTCTGGAGCCTGAGAGCCGCAACTACTGAAGCCCGTGTGCCCTAGAGCCCGTTCCCCACAACCAGAGACGCCACTGCCATGAAAGGACCGAACACCACAACCAGAGAGCAGCCCTCGCTTGTCCCAGCTGGAAAAAGCCTGTGAGCAGCAACAAAGAACCAGCTTAAGCACAAATAAACCAAAAAACTTTTTTAATATTGGGAAAACT TCONS_00092902 TCONS_00092903 TCONS_00092904 s 5' 80430 TCONS_00092902 TCONS_00092903 TCONS_00092904 s 5' 81325 EMBV3_23148 GGCCCATGCTGCAGGGCGAGCTGCGCGTTGCTCTCAGGCCATTGCTGAGCAATAGAGGTT Variant GeneID:614063|MGC140340:NM_001083765:61_cdna 192^252 1 EMBV3_08632 GeneID:614063 8 GENE MGC140340 RMI1 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) EMBV3_26478 AGTTTTTACTGTGACCTTCCTCGGCTCCTCAGACTTGCCTGCACAAACACCCAAGAACTG Gene GeneID:785022|LOC785022:XM_002690712:368_cdna Constitutive 0 NULL GeneID:785022 10 GENE LOC785022 NULL similar to Olfactory receptor 4F15 (Olfactory receptor OR15-14) EMBV3_14846 TCGAAGAGCTCCGAGGGGACAAAGATGGGAAGCCTGAGGAATCAGAACCTGAAGAGAAAA Gene GeneID:100125914|NT5DC1:NM_001105485:7_cdna Constitutive 0 NULL GeneID:100125914 9 GENE NT5DC1 MGC134143 5'-nucleotidase domain containing 1 EMBV3_29859 TCCCCTACAGGAGGAGGTCGGATTAGGTGGGGTTTGGAGGAGAACGTTTCCAAAAAAAGA Gene GeneID:528120|DOC2A:NM_001083709:353_cdna Constitutive 0 NULL GeneID:528120 25 GENE DOC2A MGC151689 double C2-like domains, alpha EMBV3_00228 AAAATTGATGACCCCTCCAAGGACCAAACAAATTCAGGGAGTGCCATTTCAGCCGAGGGG Gene GeneID:540726|TMEM57:NM_001038647:257_cdna UTR3_Alt 2 NULL GeneID:540726 2 GENE TMEM57 NULL transmembrane protein 57 EMBV3_41256 TGGACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACACCTCTACATTCTGATAGAA Gene GeneID:782170|TWIST1:XM_002686684:94_cdna UTR3_Alt 2 NULL GeneID:782170 4 GENE TWIST1 NULL twist homolog 1 (Drosophila) EMBV3_13851 GCTCTATAGCTGGTAGGAGGGGGAAGGTAAAATCTTTTTCAGTTTTCTTTGACTTGGCCC Gene GeneID:282419|CSNK2A1:NM_174635:751_cdna Constitutive 0 NULL GeneID:282419 13 GENE CSNK2A1 MGC137728 casein kinase 2, alpha 1 polypeptide EMBV3_01207 CACATTTTCAATCCTGTTTCTCTTTAGTTGCGTGCTCTGCCTTGTTCTGTGCTCCCACGC Gene GeneID:532257|USP24:XM_002686388:225_cdna UTR3_Alt 2 NULL GeneID:532257 3 GENE USP24 NULL ubiquitin specific peptidase 24 EMBV3_20516 CTTACCGAGTGGTATTAAAGTGGCCTGCCTGAAAGGGCAAATCACTTATCTGCAAGCTTA Gene BVT0102_315610 - 1 EMBV3_14824 GK000013.2:37291231-37303892 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045101 TCONS_00045104 TCONS_00045105 TCONS_00045102 TCONS_00045103 1 XLOC_026347 Coding TCONS_00045101 XLOC_026347 Coding Coding RAB18 13:37296693-37331321 j TSS32989 8907 3 TCONS_00045101_12 123 0.36319748512406 7 0.742975135010252 7.51716798255872e-05 3.60835282524071e-10 5.1155881075767e-07 2.68800149153374e-08 3.06327661231304e-11 4.9416453687424e-08 2.40144753682438e-09 8.50056310861804e-06 7.42220150827472e-06 0.000177008802847147 6.12016816151723e-09 1.57450325495671e-08 7.99550677975329e-08 7.17890037073341e-05 1.14129889453775e-06 3.81122201615027e-06 0.00173036859544489 0.00270990565495853 5.48573255287933e-07 1.16808624303864e-16 1.90360981036514e-11 0.000476291622862664 0.000348524421240128 0.000520794399464738 1.99486574915657e-25 8.20579594178883e-10 2.45232394224982e-05 6.22923343353104e-05 4.41928922207546e-10 1.20451560188816e-11 XM_005214339.1 RAB18 PREDICTED: Bos taurus RAB18, member RAS oncogene family (RAB18), 0.0 3896 100.00 0.242393622993151 NM_021252.4 RAB18 Homo sapiens RAB18, member RAS oncogene family (RAB18), transcript 0.0 2488 81.09 0.28999663186258 TCONS_00045101_1 sp|Q0IIG8|RAB18_BOVIN RAB18_BOVIN Ras-related protein Rab-18; 2e-60 187 100.00 0.98876404494382 1 coding 0 0 0 0 -0.151583025685487 0.39077826644522 -0.0211623725339976 0.670255471564956 GCAGGAGCTTAAGCTATGGGCCACTTTTGAGAATCCAGTGTAATTGTTGTTTCTTGCTCTGCCACGTCATATAGAGCCTGCTCTTGAGGTTCACAGATGATACTTTTGATCCAGAACTTGCAGCAACAATAGGTGTTGATTTTAAGGTGAAAACAATTTCAGTGGACGGAAATAAGGCAAAACTTGCAATATGGGATACTGCTGGTCAAGAAAGATTCAGAACATTAACTCCCAGCTATTATAGAGGTGCACAGGGTGTTATATTAGTTTATGATGTCACAAGAAGAGACACCTTTGTAAAACTGGATAATTGGTTAAATGAGTTGGAAACATACTGCACGAGAAATGACATAGTAAACATGCTAGTTGGAAATAAAATTGATAAGGAAAATCGTGAAGTTGATAGAAATGAAGGCCTGAAATTTGCACGAAAGCATTCCATGTTATTTATAGAGGCAAGTGCAAAAACCTGTGATGGTGTACAGTGTGCTTTTGAGGAACTTGTTGAAAAGATCATTCAGACCCCTGGACTGTGGGAAAGTGAGAACCAGAATAAAGGAGTCAAGCTGACACACAGGGAAGAAGGCCAAGGAGGCGGAGCGTGTGGTGGTTACTGTTCTGTGTTATAAACTCTGGGAAACGCCATCTCTTGCGTATTTGATCAGATAATGTCATCTTTCTGTATATAAACTCTCTTAACTGCTATTTTAGGGACCTTGCAGTTTGCACATATTTGTTTTGTATCATGGCAGTAAATATTTGTGAGAAAGCCCACTCATTGACTTTTCCAGGTAAAACGTAAGCATGCAAAGTTTGCAATCTGCAGTTTTTTATGTAACATAAAATAGGTGTACCTTTATAAGTACATTTGATTTTATGATTTACATTCATCATGTGATTTTTTAAAAATCCACCTCTCTAGTATATGTTGATACAAGGTCTGGTTTTGGTCTCTTTTTCGCTTAAATACTTATCAATTACTGAATTAATTGGTATCGTAGAACTCCCAGGACTACTGGGAGATAAACAGATGTCATCAAACCTGGCAGATTTCCCTTCAGGAATAACAAAGAGCATGATATTCCACAGCTTTCCTAGGATGTTCGCTGACGGATTCTCTTTAGTACTAAGCAAAATCCTCTTTGCAGGATGTGGTCGAGGCCAATTTATAATTAAATCCCCGTTTGTTCTGACGATACTTCAGAAGTAGCATTAATATGTTAAAGAAGTTTGGTCTTCCTTGACTTGAGGAGCAGCTCATTGCTTAGCTGGAGTTTTAATTCTGTGATGTGTACATGGCTTCATCAGCCTCTGTGCAGCGTTTTGGGTTGTGTGGTATTTGACAGAATCGCAATAAGATTCCCCCATTTTGGTTTCAGAAAGACAGGAGTAGTATGTTTGTGTAACTCATGTAGCACTTATCACCTTTAAAACCAACACCTTTTCCCATAAATGTTGGTGGTGTTTGTTCCGGTACTTCAATTATAGCTTGTGTAATGTTAATGAATATCTGTATCTTATGACTTCCATAAATGACTAGTTGATATTCAAAAACATATTTCTGTGTTTTGAGGGTTGGGGGAAAAAACACTAAACTATAATTTGAAAAAGGCATATTGCTTCCAGATTTCGATGTGTATGGAAAAATACTGTTGCAGTGAAAATCTTGGTACAAACTTGTACAGACTAATAAATCTTTTACACAGTATTCAGTTTTGTAACCTCCTGCTATTGTACATTGTATATTTTTTTCACTCATGTATTATTTAATATACATTGATCTCTGCTATTTTAAGCTTGCAGATAAGTGATTTGCCCTTTCAGGCAGGCCACTTTAATACCACTCAGTAAGATTAATAAGAAATACTAATTTCTGGGCGGTTTGTTCTCTATATACAGTTGCAAACGATAAACATTTTTGTGGGTCACCTTTACAATGCTTGTGATAATAGACTGAAATGTATATCTTCACATAAGAAAACCTTAACATACTACATGGTTCACACTTCTTAGACTATATTACATGGGATTAAAGGTTTTATGCATTACGTATGTTTTTACAGAAAATGAAACATATACTACTACTTTAATGTTAGAGAAAGATAGCTAACACATGTACTTATGATTTGTTGTTACATTAAAACTGTAGATTTGTATATGTGGTTTCTGTATTGACATTTCTGTTTATTGCTATTTGCTCCTTGAGCCATAGAATATTCTTCCTATGCATTGGATTGTCTTTATTTGGTCAGAATTTGGATACATATGAGTCAGTTAACTTTTAACAACTAATTTTGTTTGATTTATATTGTAACCTTTTATAGTTTTTTAATAAATCTAGCCTGCTTTCCCTAGATGCATTTGTGCAGGAAGTATTATACATTTCCTTGTTGCTCTCATCAGCTGAGGAAGTCCTGAATGTTACACTACTTCCTATATTCTGTAGGAATATAGAATATATATTATATATATATAACTCTTGTTGCAAGAGTTATTCTTGTTGCAAGCTTCTTGTTTCATAGTGTAGGTTTTCTAAATGAAGTAGTTGTAATAGCTAAAAATTGTCACTTAAATAACAAGATTTTGTCAGTTCTTCATTTCTGAAATCATTTGAAGTTGAGTGCCTTTTGCAGATGGAGCAAATTAGAACGATTAGAAGTTAGGCTACCACTCCAGTATTCTTGGGCTTCCCTTGTGATTCAGCTGGTAAAGAATCTGCCTGCAATACGGGAGACCGGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGACTACCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTATATATAGTCCATGAGGTTTCAAAGAGTTGGACATGACTGAGCAGCTTTCACTTCACTTCATTCTGAGTTCTGGGAATATTCATATAGAGCTAAACAAACAAATTCGGTTTATATTAAGAGGGATAGTTAACATTTATTGAAGCTTCCTTGATGTCAAGCCCTGTTCTAAGTGCTGGTTTATCTCATTAAACCTCACAGCAACCTTGAGAGATTGGTTGGTACTGCTATTAGGCCCATTTTAAAGGTGAAAATAATAAAATACAAATATTTTAAGGAACTTCCCAAAGATCACAAAGCAAATCAGTGAGAGTTGGATTCCAGTCAAGGCATCTTCACTCCTGAGTCCATGCTCTTAACCACTGCTCCCTTTGCTATGGCTAGTCACTAGCTTTCTGTTTTAAAATAGCAGGGTTATCATTCTTTTGTTATGTGTAATAGGTGTATTTCAGATTTTTTGGTTATAGAGTAAATCCCATTGATGTAAACCAACTGTGTAAGTCATTTTACCTAAAAGTTAAGGTAGAAGAGTAGGTGGTCTCCTAGTTCTTTTACCTCCTCATGGTGGAATGAAAATCTTTGACCTAGAAAAGTCAGAACTTATGGCACCTTAATTTCCTGTTTATAATTGGACATGAGAAAAGTTATTAAATCTGGGAATGGCCTTTTGCTCAAAATTAAAATCTAGGGGATGTTTTCATTTCAGGTACTCAGCTGCCATGTTCAAATTCACACTTGGCTTTCTAATTGAACACAGTGGAATTGGTCTTGATTTTGATTCATTGTGACTCGTGTACTCAAATACACATGATTACATGATTCTGTTCCAAGTGTGGAATAGCACAGACCTACCTCATATCTATAATATATTTAAATACAATTTAATGTGTCTTTTTTCTGATTTTCAAATGAAGTGGGATAATCCTCTTGATCCTATAGGTTGTAGATCTTTGCAGTATTCAATCCTTATGCTTCTATATTTTGAGGTTCATCTCACCAGTCATACTTAGGAGATTTTTATGTCCTTCATTTATTTTCCCAAGTTAGAGATGGGAATAAGATAATTTAATAAGTTTTAGATGATTTTATACTAGTTCTGACCCCAGCTATGCTGAGGGTAATCAACTATAGATTTCATCTTGGATTTTGTCTAGAAATGTTGAAGGAACAGAACGGAAAGAATAAGCCAAGTCAAGATTTGGAGATAAGGAATATAGGTTTACCCAGAAATCTCTGGGGTTTTTTTGTTGTTGTTTGTTTTTAATAGTAACATCTGTCAGGTTGGAGGAAAGGAAACATGACTCAAGTTCTGTTACATTCTGGCCTTTAAGTTTTCCTATTTGTTGCTAGCCTTTTGTTTCATATTTATGAATCAGTAGTGTTTCTAGGGATGGTATAAGCTTGTTTCATTGCCTCTTGGAGTTAGAGCTGTTTTGTCACAGACGTTTCCAGTAGTGGTTGAGCTTTTAGTTTTCGTGGGGCCTGCTTCCTCACCATCTCTCTCACACACAGCAGTGTCTTTTTCTTTCACTAACCTGATAAATAACAAAAGTATGCAATTTTATTGTATTTCTTGGATTACTCGTGTGGTTGAGCACTTCTAGTATTTCATCGGATATTTGTATTATTTTCTTTTATTCCCTTTTCATGTTATGTTGTGTTCGCCCATCCACCTCCTCAGAATACCATCCCCCTTTTCTTTGGATAGTGGCAGCCCATCACACAACGCAGTTTGAATGGGACTGTCACACCGTCGGCTCCAGAGCTGACCTGGTTCTCTTAAACCAGTGCCACTTGCCCCCTCCCCCCAGGACATGGTTCAGGGATGGGTGACAGACCCGGATCAGGCCACTTAGTTACAGCATGTTTGCTAAGCCTCCCTCGGGAACTGCAGAAGGTGACACTTCGTTGGAGATAACGTGGTGTGATAACTCTGAACTTTTTGTAGCCAGTTTTTCTGATTTAAAGGAGCCAGCTTGAGGGCTGTACTAAGAAAAGGAAAGGGAGTCGGAGTTGGAGCTTTGATGAAGTCTGGAGCGTCTGGATCAAACTGCACCTGAAGTTAGCGTTACTTCTGGACTTCTCACTCACGTGAGCCAATAAATTCTCTTTTTGTTTAAGCCAGTTTGAGTTGGATTTTTTTTTCTTGTAATCAAAGCTTTGCTGTGGTGTATGTGGTCTTTGTGGGGACTCTTCCTACATGGAGTTCAGTGTGTTGATCACTATCACTTGAAAAGCCATTATTCTTAAATAACTTGATATTTTAGTGGGGTTACTTTCATATATTTTTTTGTGGGTATATACAAGTATCTATTTAAGGCAAAGAAGAAGAGGGTGGCAGAGGATGAGATGATTAGAGAGCATGACCGACTCAATGGACATGAACTTGAACAAACTCCGGGAGATAGTGGAGGACAGGAAAGCCTGGCTTGCTGCAGTCCGTGGGATCACAAAGAGTTGGACACGACTCAGCAACTGAACAACAGCAATATAATTTTGAGGGCTTGCTTCATAGGGTCTCGTGGTTTTGTTTTTTTTTTTTGGTTTAATTTCCTCTGTCATCCTAACACTCACTGTCCCCCTTTCCTCCCTGAGATAATCATTGTTACAATCTGGCATGTGTATCCTTTCTGCTATATATATGCATTATTTTACTCTTGCTATTTTACAAAAATGAGATTATCTGTATATTCTTCTCTGCATATTGGTGTTCTTACCTAACAGTAGATTCTGAAAATCCCTTCAAGCCAATTTGGATGCATCTAGCATCTATTTCCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCAGGTAGGCTGCAATCCATGGGGTCGCTAAGAGTCGGACACAACTGAGAGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGAATGGTGGAGCCTGGTGGCCTGCCATCTATGGGGTTGCACAGTCAGACACAACTGAAGCGACTTAGCAGCAGCAGCATCTATTTTGGCTCCCCAGGTAGCACTAGTGGTAAAGAATCTGCCAATGCAGGAGACACAGATTCATGGTTTGATCCCTGGGTTGGGAAGATACTCTGGAGGAGTGCATGACAATCCACTCCAATATTGTTGCCTAAGAAATTCCATGGACAGAGGAGCCTGGTGGACTACAGTCCATGGGGCTGCAAAGAGACACAATTGAGCATACACGGCATCTGTTTCAATGATTTCACAATATTAATATTCGATGCTGTGGCTTATCACAGTTTACTTAACCATTCCTCTAGTATTGGGCATTTATGGTGTTTCCATTTTTGCCTTTGCAGATGGTGCTGCAATAAATAGCCCTGTATGTATATACCTTTTTGTTTCTGTGGGATCCAACTTCAAAGAGTTGGATCCATCGGCCAAAGAAAATTTATTTTTTCATTTTGATGTGTCTTGTAAATTGCTTTCAAAAATCTGTAACAATTTACATTTCTATTAGCAGTATGTAAAGATACCTCCACCTGCATTCACCATCAGGAGCAGGAGGTGTCCTCAAGTTTTAAATTTTGCCACTTCGGTATTTCTAAGATATTCGCTTACGTTAGTTTGCATTTTCTGTAGAGCATTTTTTCATGTTTGTAGGCTATTTGGAGTTGCTCTTTTTTGGAATGATTATTCATATCCTTTGCCAATTTTTCTATTCAGTTTTTTTTTTTCTGATTTTATGATGTTATATGAGCTCTTTATATAGTACAGATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTACCGTTTCCTTCTCCAGGGGATCTTCCCACCCAGGGATTGAACCCTGGTCTCCCACATTGGAGGCAGACGCTTTAACCTCTGAGCCACAGGGAAGCCCTAGTACAGATACTAACCCATATGTTTAAGTTTTGAGCATTTGTTTCTACCCCAGTGTTTGCTTTTCAGTTTGTTTATGCTGTGTTTTTTCTTACAACTTTTAAAAATATTTTATTATACCTGGTGGCTCAGACGGTCTGCGTACAATGCCTACCATGTGGGAGACCCGGGTTCAATCCCTGGGTCAGGAAGATCTCCTGGAGAAGGAAATGGCAACGCACTCCAATATTCTTGCCTGGAAAATCCCATGGATGGTGGAACCTGGTAGGGTACAGTCCATGGGGTCGCAAAGAGTTGGACACGACTGAGCGACTTCACTTTCACTTTCGGGTTCCTCAGCTCTTAGACTGTACATGCAAATCTCCTTAACCTCTTCTGAGACTGTTGTTTTAGTTTTTTCTTTTTAAACCCTTAATAACTTAGAGTTCACTTTTGCTTATGACACAAGGTAGGGAACCATCTTCTTTCTCATATGGGAGCCAGCACTTCCCCACTGAGCTGAAATAATCATTTTGCCCTTGATAAAATTCCTGTAAGTAGTGGAGTCTACTCTGGCTTTCTATTTTTATTTTAGTGTCTCTTCACCATGGAAAGTTATGGATTTTAGTGTGTCTAGATTTCTTTAATCCTGTGTGTTTGATTTATGCTTTAAAAGCATTCTAAGAAGGGCTTTGCAGGTTTCATCAGACAACTCCAGAGGCCCGACAAAACCAAGGTTTTCATGGTAGTGGCTCTATAATATGTTCATGACTGATAAGGCAAGTTCTTTCCCATTCTTTTTCAATTTGTTTTTTTACATATGATCCTTCATTTTATTATCCTTTGCCCATTTTTCCTTTTCGTGGTCTCTTTTTTTTAACAGAGGAGTTCTTTATAAAATGTGATATGAGTACTAGTCTTTTGTCACTGATATATATTGCTGGTCTCAAAATAGCAGTTTGTCTTTTGAATTTGTTTGAAAAGTGCAAAGTTAAAAAAAATTTTCAGTAAAAATTTAATTATAAAAACTAGAATGCTTATTGAAATCACTTGATAAATATTTCTGTGTTAATTGTGAGAAAACTGATAATCTAATGGTAAGACTTGCCATTAGGAAACAAGATATCTTTCTATTCAGAGTTTATGCTCTTTTTATATTTATACTTTTGTTTACATAGGTTCTGAACCTTCTTTTTAAAAACTATTCCTAAAAACTTTTTTTTAGTGTGAGTAGATTTGGTCTTCTAATTTTGGAATCTATGTAGTTGATGCTAATAAGGAAAAGCTATTCTATCCAGCTGACTAATCAATGGTACTTTGTTTTAAAATAAGATTTCTTTCGTTTTCTAGGTAAAAGGGAGAAAATATAATTGTAATTTTGTCATCGTTCAGTCGCTAAGCCATGTCTGACTCTTTCCAACCCCATGGACTGCAGCACACCAGGCTTCCCTGCCCTCCACTATCTCCTGGAGTTTGCTCAAGTTTATGTCCATTGAGTTGGTGATGCTCTCTATCTCACCTCTGCCATTCTCTTCTCCTTTTGCCTTCAAAATTGCCTTAAAATTGTAATTTTAATACACATAAATGTTTATTTAGAGGAAATTAACAGCCATCTGTTTCATTTCTTTTTTTTTGTTTGTTTCATTTCTAATACCATTTTGAATTTGTTTTCTGACAAAGTGGAGGAAACCTCCCGTTTCACAACCGCTGCTAAGGTCTGCAACCTTCCATTCAGTTCCTCGGTAAGCCCTCCCAGGCCAGGGCTCTTAAGCAGGCCAAGCTCTCAGGGCCACCATTTTCTGCTTTTTACATATGCAATCATAGACTGGGCTGTCATTTCTATTGATGCTAGCTTCATGTCTTGCAAGATTGATAAACTTGAGGATTCTTTTTCTACATGCTGGAATACTTAATTTTAAAAATGGGTATTGCCTATTTTTTTAAATTATTTTAATTGGAGGCTAATTACTTTACAGTATTGTAGTGGTTTTTGTCATACATCAACATGAATCAGCCATGGGTGTACATGTGTTCCCCATCCTGAACCCCCCTCCCACCTCCCTCCCCATCCCATCCCTCTGGGTCATCCCAGTGCACCAGCCCTGAGCACCCTGTCTCATGCATCGAACCTGGACTAGCAATCTGTTTCACATATGATAATATACATGTTTCAATGCTATTCTC EMBV3_19043 GGACGTCCGCCGGCGCTTAAGTGATGTGATTAATCCAATTCCCGCGGGCGCCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_20901 TGGAGCATTGCCTCAAACATGGGCTGAGAGGACAGCTGTGGGAAGGGGCAGAGCTTGGCT Variant GeneID:528153|RUFY1:XM_002688485:58_cdna 443^560 2 EMBV3_12216 GeneID:528153 7 GENE RUFY1 NULL RUN and FYVE domain containing 1 EMBV3_31899 CAGCTTCGCCAACCCTTTGCTACCTCCGCCAATGAGTGCAATAGAACCGAAAGTCCCTTA Gene GeneID:537176|DCC:XM_002697828:509_cdna Constitutive 0 NULL GeneID:537176 24 GENE DCC NULL deleted in colorectal carcinoma EMBV3_22331 GAAGGTGTAAAGCTTGTTCGAATGTCTGCAAGCCAGCTAGAAGCCCTCTGTCCTCAGGTT Gene GeneID:100337182|LOC100337182:XM_002689214:34_cdna Constitutive 0 NULL GeneID:100337182 7 GENE LOC100337182 NULL catenin, alpha 1-like EMBV3_37970 TGGGAGGTCCCGGAGGATGCTGGCCCCCAGCAATCTGATCCGCCCAGGCCTGCAGAGTCT Variant GeneID:509223|HEBP2:XM_002690275:23_cdna 191^433 2 EMBV3_30615 GeneID:509223 9 GENE HEBP2 NULL heme binding protein 2 EMBV3_21435 TGGACAAGGAACCTATATAGACATTTTTCAAAGAAGACAAACAGCCAACAGGTACATGAA Gene BVV0102_177930 + 1 EMBV3_37366 GK000030.2:15013246-15108750 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05125 TTTTGTTGGGACAGGCTGTGTGATGCATAGAGCCTCTTTCATGTGAAATGCGTCTGCTGC Gene GeneID:505797|TMEM30A:NM_001075223:8_cdna Constitutive 1 NULL GeneID:505797 9 GENE TMEM30A MGC139932 transmembrane protein 30A EMBV3_26635 ATCACACGTCTGGTTCCAAAGGCAAGAGCCCAGCATTGATTTCCAGAACGCCTACATCTG Gene GeneID:512779|C24H18orf21:NM_001079590:88_cdna Constitutive 0 NULL GeneID:512779 24 GENE C24H18orf21 C18orf21 chromosome 18 open reading frame 21 ortholog EMBV3_25936 CTCTGTGAATATTAGGTTTCCTCCAGAAACAGGCCGTTATTTGAGGAAGTTAACTGTGTG Gene GeneID:540393|ARHGAP12:NM_001102241:145_cdna Constitutive 0 NULL GeneID:540393 13 GENE ARHGAP12 MGC157186 Rho GTPase activating protein 12 EMBV3_43778 ACCCCTTGTTGTATAAGGTCTCCATGTCCCATCAGGTCTGTTTGGTGCTCTCTTTGGCTG Gene GeneID:506960|LOC506960:XM_002699158:33_cdna Constitutive 0 NULL GeneID:506960 29 GENE LOC506960 NULL similar to olfactory receptor, family 8, subfamily B, member 3 EMBV3_26356 ATCACCGTCATCGGCCTGACTGTGGCCATGACCACGCTCCCCTCTCAGGGCCCAGTGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06417 GCTTGAGCATAGCTGGGATTTGTAGCCCATTTTCTAGGCTTATTGCAATCTCACTGTGGT Gene GeneID:540878|MGC152575:NM_001102249:11_cdna UTR3_Alt 2 NULL GeneID:540878 16 GENE MGC152575 NULL hypothetical LOC540878 EMBV3_17654 AACCCAGCTTGTCAGTTGTGCAATTCAGTTCCTCTATGTCCTGTCTGTGTCTGCTAGATC Gene BVT0102_057728 + 1 EMBV3_13987 GK000009.2:9933802-10012235 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04284 ATTACACAGTCACCCTGAACTCCCAGCTCTGTGGATGGCTGGTTCTGGAGTCCTGGATCA Gene GeneID:787665|LOC787665:XM_002707854:426_cdna Constitutive 0 NULL GeneID:787665 7 GENE LOC787665 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_07090 TAAGCTTCAGCGAGCCCCAGCAGCCGCCCCCTGCCATGAAGTCTCACCTGATCGTCACGT Gene GeneID:509082|ZNF395:XM_002689475:3_cdna Constitutive 0 NULL GeneID:509082 8 GENE ZNF395 NULL zinc finger protein 395 EMBV3_11665 TTGTCAGTATGTTTCCTGGGGAAGAGGAAGTAACACCTTAGGAACTGAGGCATACCATGG Gene GeneID:614986|PUS10:XM_002691333:495_cdna Constitutive 0 NULL GeneID:614986 11 GENE PUS10 NULL pseudouridylate synthase 10 EMBV3_13330 AGCACAGAGAATACCAGTGATTTTTTCAGCTTGTCACAGCTCGTAGGTGATAGATCGGTT Gene BVT0102_303426 + 0 NULL GK000005.2:533966-790666 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42978 CTTGTCGTCAGTATCGGTGCTCAGGGCTTGGTCCCTGGGATGCAGGAGATTCTGCTTATT Variant GeneID:504889|GMPPA:XM_002685583:184_cdna 270^422 1 EMBV3_33339 GeneID:504889 2 GENE GMPPA NULL GDP-mannose pyrophosphorylase A EMBV3_37544 GGGAAGCGCGGCCCGGAGGGCGGATTCGAGAACACAAGCATTAAAATCACGATGAATGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03000 GTGTATACAGATGGAGAAGTGTAAACAGATGGAGAGATATTTCATGTTCCTGGGTAGGAA Gene BVT0102_329433 - 1 EMBV3_31808 GK000016.2:894203-925080 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36231 GCCACTGGCATGGCTCATTAGTAATCGACTGTACCTCATTATGCAAGGGTGCTTTGCATG Gene GeneID:513537|ALDH8A1:NM_001075626:20_cdna Constitutive 0 NULL GeneID:513537 9 GENE ALDH8A1 NULL aldehyde dehydrogenase 8 family, member A1 EMBV3_27404 GTAACCATGACCAGGGCCCAACCTTAATTTTGAGTGCTTTTCCGGTGGTACTGCCAAGGG Gene GeneID:281940|NCALD:NM_174398:6_cdna UTR3_Alt 1 NULL GeneID:281940 14 GENE NCALD MGC139617 neurocalcin delta EMBV3_22036 TCACAAGATACTGAATATAGTTCCCTATGGAACTATACATTACAAACTTGTTGTTTATCC Gene BVV0102_143655 + 0 NULL GK000007.2:101204961-101908949 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04656 CATCGGTGGAGAAATTCAGGAAACATCCAAGAAATCTGCTGTCAAAGCCATTGAGGATTC Gene GeneID:540693|AP1S3:NM_001103296:166_cdna UTR3_Alt 2 NULL GeneID:540693 2 GENE AP1S3 MGC157206 adaptor-related protein complex 1, sigma 3 subunit EMBV3_13533 GCTGTTAAGTGTGTAACTTAGATGCGGGATAAGGGAAGAGTGTGTCCGCTGACGGTGAAG Gene BVV0102_214002 + 0 NULL GK000013.2:73501670-73547630 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14576 GCTCCTGCGGCCGCTGTTTCAACCCAGGCGGCAGAAAAATTAATGAAACAAATTGGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19205 AGTTTAAGCTGCCCTGCGCGAGCAAGAAGGTTCTGTCTTAACCAGAATCCCAGTCTGGAC Variant GeneID:618782|TEPP:XM_002694795:624_cdna 604^665 2 EMBV3_15415 GeneID:618782 18 GENE TEPP MGC134171 testis, prostate and placenta expressed EMBV3_00272 AAACTGCTGACACAGCCATTCCATTTCACTGAGTTTGACAATTATGCGGAGTGGGACTTG Variant GeneID:505401|TADA2A:NM_001034244:212_cdna 641^729 1 EMBV3_34427 GeneID:505401 19 GENE TADA2A MGC127042 TADA2L transcriptional adaptor 2A EMBV3_33445 GCGATGTAGCTTTTCCTTCAGTGTAGCATCTCCTCCCCTAGAATCATCCATAGATCACAC Gene GeneID:100124521|SLC25A37:NM_001102555:2_cdna Constitutive 1 NULL GeneID:100124521 8 GENE SLC25A37 MGC155035 solute carrier family 25, member 37 EMBV3_36164 GAAAAGCTTCACCCAGAATTCCATCCTTACTGAGCACCAGAGAACGCACACGGGCGAGAA Gene GeneID:100139972|ZSCAN23:XM_002684938:105_cdna Constitutive 0 NULL GeneID:100139972 1 GENE ZSCAN23 NULL zinc finger and SCAN domain containing 23 EMBV3_19724 CCTGGAAGTCCGCAAGCCTCAGTTCATTTCTCGCTCACAAGAACGTCTGAAGAAGCTGGA Gene GeneID:614587|LOC614587:XM_002698566:89_cdna Constitutive 0 NULL GeneID:614587 26 GENE LOC614587 NULL similar to Uncharacterized protein C10orf90 EMBV3_25223 TGGCTGGCGTCTATTACTTCACCTACCACATCACCGTCTTCTCCAGGAACATCCAGGTGT Gene GeneID:523616|C1QTNF9:NM_001075846:49_cdna Constitutive 0 NULL GeneID:523616 12 GENE C1QTNF9 MGC152247 C1q and tumor necrosis factor related protein 9 EMBV3_28001 GATCACAGGGCTGGGAAAATTGTTGTGAACCTCACAGGCAGGCTAAATAAGTGTGGAGCG Gene GeneID:524269|LOC524269:XM_002696319:50_cdna Constitutive 0 NULL GeneID:524269 20 GENE LOC524269 NULL similar to ribosomal protein S15a EMBV3_42488 GACAGTGTCTTGACCTGGACAAACCATGCACATCTCCTGTTCATCTCTTCCTATGCCAGT Gene GeneID:281343|MYOG:NM_001111325:2_cdna Constitutive 0 NULL GeneID:281343 16 GENE MYOG NULL myogenin (myogenic factor 4) EMBV3_26351 TTCTGCCGTGGCTTCCTTCCGTCAGGGCTCGGAGGAGCGTGTAAAGAAGAAAAAGGTATT Gene GeneID:532432|REEP2:NM_001046325:16_cdna Constitutive 1 NULL GeneID:532432 7 GENE REEP2 MGC137722 receptor accessory protein 2 EMBV3_07205 CTGACTGGGAACTGGCGTTGGGCCCTCCGAACCCACCCCGGGGAGCTGCTGAGAAGCAGG Variant GeneID:516041|SPNS3:XM_002695791:319_cdna 715^769 1 EMBV3_40574 GeneID:516041 19 GENE SPNS3 NULL spinster homolog 3 (Drosophila) EMBV3_13234 ATGCTTCTTGCCGAAGAGTTTGCTGAAAGTGCCCTGCACCGTCGGGTTCTTTTTCATGCT Gene BVT0102_440123 - 1 EMBV3_18510 GK000023.2:15863803-15887149 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134221 TCONS_00134220 1 XLOC_081340 Coding TCONS_00134221 XLOC_081340 Coding Coding C23H6orf132 23:15841663-15874544 = TSS100103 2746 1 TCONS_00134221_4 622 4 0.916605839416058 2.55757283645316e-07 0 1.68143169827536e-06 0 4.47620103949565e-07 2.70422320114338e-06 0 0 0 0 0 0 6.84812711196796e-08 0 5.07639813330338e-06 0.000899645031991443 3.02237007350532e-05 0.00109380707909651 0 0 1.1965213342932e-06 8.10449612260137e-06 1.2845984940585e-10 0.000917820938131893 1.2613144981546e-05 2.5630206802049e-06 0 4.96049987392437e-07 1.76607293069389e-06 0 XM_002684509.2 C23H6orf132 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf132 (C23H6orf132), mRNA. 0.0 4655 99.77 0.947195921340131 NM_001164446.1 C6orf132 Homo sapiens chromosome 6 open reading frame 132 (C6orf132), mRNA. 0.0 2060 77.22 0.947195921340131 TCONS_00134221_4 sp|Q5T0Z8|CF132_HUMAN CF132_HUMAN Uncharacterized protein C6orf132; 1e-179 546 64.18 0.836012861736334 0 coding 0 0 0 0 0.0920501098729293 0.548480348520503 0.00440831426872834 0.9284892896186 ATGAAAAAGAACCCGACGGTGCAGGGCACTTTCAGCAAACTCTTCGGCAAGAAGCATGCCAACCCGCCCGCCACTTCCCTCTACGCCACCAACCCTCCCTGGATCTTCACCCAGGAGGCCCCGGAGGAGGGGACCCGGGGCTTCGAAGGGCCCCATTCGACCTCACTGCCTCCCAGCTTCCATATCCGCTCTGCGTGCCAGGCCTACCCCGACAGGGCTGCTGAGCTAGCGCTCCCCAAGGAGCCCGGTGCTGTGGCACCGGCCGGTCCGAGGCGGGGCCAGCTCAGGTCCAGAGCAGTGAACAAGCCGAGACGCCACCTCCAGCCCCTCCCCTGCCCCCTCCTGCACCCCCACTCCCTCCGCCAGCACCCCCGCTGCCCCCAGCCGCCCCTCCTCTGCCACCTGCTGAGAAGGCAGCCCCTGCACCTGCTGGCTTGATGAAAAGACCCAAGTCTGGCTCTCCTGCTCCCAAACCCAAACCTGAACCCCCCAGCCCGGAGGAGACAGTGTCTTCGGAGCCCATGGACTGGCGGGACCCCAGCCAGATGGCAAAGCTGCGGGACCAGCTGTCAGCCTATCTTTGCGGCTCCAGGAGAGAGGACCGGCTCGCCAGTCACAGACCAGGTCCAACGGCAGCCTCTCAGGAAAGAGAGGACCACAAGCGTCCCAGCTTGCCTGCGAAAGAGGCGCCCCCGAGTCTGCTACAGAAGGAGGCCCCCCCGAGCCCGCCAGAGAAGGAGGCCCCCTCAAGTGTTCCTGAGGAGAGTCCCTGCAGCCGGCCAAAGAAGGCTGCCACCAGCCTGATCCTCCCTCCTGTGGACTACCTCCCCCAAGACGCACCAACTCCTAGCGTCTGGGAGATCCGGAAGAAGCTGGAGGCCCAGCTTTCCTCATTAGCTGAGAAGGAGGCCAGGCCCAGCAGAGGGTCTCTGCCTCCCAAACCTCAGCCAGAAGGGGGAAGAATCTTTGAAAACAGAGATGATAACAGCAAATTCCCCAAGCCTGTGGCCAAGAATCTGCCACCTCTATCCACCACCCCTCTGCCAAACACACCACTCCAGTCCAAGGCCACGCCCGGACCAGCCACACCACCCAAGGCCACGCCCGGACCAGCCACACCACCCAAGGCCATGCCCGGACCAGCCACACCACCCAAGGCCATGCTTGGACCAGCCACAACACCCAAAGCCGTACCTGGACCAGCCACAACACCCAAAGCCACGTCTGGGCCAGCCACACCACCCAAGGCCACACCTCTACCCATCACATCTTCCCAACTGATAGCAGAAAAGAACCTGGTCCCAGCTGGGCAGTGGGAGAAGCCAGAACATGAAGAACTTGCAGTGCCCTCCAAGCCAGAGGTAGAGGGGCACTCCTCAGAGACCAGTAAGCCTCCTACACAGGGAGCCCTCTCATCTCCAGCCTTCCCCCCAAAGATATCACCTGGGCGAGAAGAGGTGCCGTGTCTCTACAAGCCCCATTGCAGCCAGAACAGCTCCAGCAGAGAGGTGGCTGTGGTGATGCCCACCCTGTCCAGAGGAGAAGCTGCAGGGTCAGGCAAGCCTGTGGCGGTGAAGGAGCCCCAGGAGCTGCCACCCAAAGCCCCAGTCTCATCCCAGGCTGCTGACGAACTCCTCAGGCACCCGGTGACGGGGGAGGTGGTGGAGAGGGGCTCCCCGATGGCCCTGCTCCTTGCGGCCAAGCAGAGGGCCCAGAAGGGGAGGCCCAGGGGGGCCGCCCTGGGCCGGTCCTCCCTGCCAGGGAGTCTCCAAGGCCCCAGCCAGCCCAAGGCAGGGTCTGATACCATCTTGTACAACGAGGGCCAGCCCAACTCCTTCACTGTGGTCCCCAAGGTGTCCAAGGAGACTGAGAAGGTCCCCCAGCTAACCTCGCCAGGACAACCCAAAGGACTCTGTCAGTGGGAACTCCAGCCCCGCAGGGACCCAGAGGACACGGAGTCGTGCAGCGGGCCCAGCTGGACAAAGGTGAAGCCCAGGCCTCCGCGGCCTGGGAGAGACAGCGCCTCCAGCCTCCTCCAGGGCCGCCTGCTGCCCAAGTCTTTCTCCTCCCCTCCTTCTCCTTCCCACAGCCAGAGGAAGACAAGGAGGAGGAGTTCAACTTTGAGGTCATCCCGCCGCCGCCAGAATTCAGCAATGACCCCGAGCCCCCGGCCGCCCCCTTGCAGTATCTGGGGCGCCGGGGTTCGCCTCCCCGGAACAATTTCTCAGACTTGGGGCAGCCCGCGAATGCGGGCCCACCCCGCGTCTTCTCTCACTTCGCGGATCCAGGTCCAGCCCGGGGCCTAGAGCGCTTCTCCGGCGTGGGTGGGGGCCGCTCGCTCATCAAGAAGCGCCTGTACGTCGGGGAGCCCCACCGCAACCCAGGGCCGCCCCGCGGCGGCACCGGCCGCAGCCTGAGCTTCCCCAACTGCTTCGGGCCGCAGCCCGGGGGCCCCTTCGCAGCGCCCAGCGGCCCAGAGATGCGGCGCGTCAACTCGGCTGGCCGCGGGCCCCCCGGCGGCCTGCACTCGCGGAAGGTGTCCCTGGAGGCCCCTCGCGGAGAGGCCAAGTACAAAGCTCTCGGCGGCGGCGGCGGCGGCGACTACGGCTGCACGCAGGCCACCGGCAGGTCTCCCCACAACAACACGCAGTACGGAAGCTCCATCAACACATTCACTGTGAGGCCTGGGACCCGCCATCCCATCTCCTATGCCTACTCAGGGGCCCATTGGAAGGCCACGTCCTGA EMBV3_35977 ACGCTGGCCTGAATCCCATTTCTACTGTAACAGAACTAAGAAACCGGCATGCTCAGGGAG Gene GeneID:613336|CCT4:NM_001038194:134_cdna Constitutive 0 NULL GeneID:613336 11 GENE CCT4 MGC134500 chaperonin containing TCP1, subunit 4 (delta) EMBV3_31775 GCGATGTGGCCGATCAGGAACAACTGAGAGGTTTCTGTGATCAGTGGAACCTACCTGGGC Variant GeneID:512259|HPGD:NM_001034419:29_cdna 245^351 4 EMBV3_16569 GeneID:512259 8 GENE HPGD MGC127443 PGDH hydroxyprostaglandin dehydrogenase 15-(NAD) EMBV3_19217 TTCTGTATCTCTAGGTAACATCTCCAGGGATAGAATGTTAGGCTGTCACCACTGGGGCCC Gene GeneID:613802|TMEM14C:NM_001035437:235_cdna Constitutive 2 NULL GeneID:613802 23 GENE TMEM14C MGC126931 transmembrane protein 14C EMBV3_25788 TTCCAGCTAGGGATCAAACTTTTGTCTAGGGATGACCCCAGAAGGCCAAGACACTTGCTC Gene BVT0102_179023 + 0 NULL GK000006.2:96657179-96723381 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08499 ACGTATCACAGTCATGGACTGGTTCGAGGACAGCCGACTGGACGCATGTGTGTATGAGCT Gene GeneID:519042|NCCRP1:XM_002695049:383_cdna Constitutive 0 NULL GeneID:519042 18 GENE NCCRP1 NULL non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) EMBV3_00603 TGGGCCTGCTGGTCTTCGCCCACGACCATGGTCTTCGCTGCGAAAGTTCTGAACCTCGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42013 GAGGGTGTTTTGCCCTTGACGTTTAAGGAGTGAGAAGTTCACTGGGACTTATGTAGCCAG Gene GeneID:281281|LGMN:NM_174101:118_cdna Constitutive 0 NULL GeneID:281281 21 GENE LGMN MGC128270 legumain EMBV3_13789 CCCTCTTGTCTGGCTGCTGCAGCTTGTCTATAATGCCCTGACATGTTGCATTTTCCTCAT Gene BVV0101_012467 + 0 NULL GK000011.2:94222448-94281215 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025949 1 XLOC_014887 NonCoding TCONS_00025949 XLOC_014887 NonCoding NonCoding - 11:94267355-94271638 - TSS18729 4283 5 TCONS_00025949_4 105 1 0 1.87378228523245e-09 1.42910299388532e-09 1.34659869387025e-09 1.24379246537314e-09 0 4.81615371009166e-10 8.27566424712049e-10 7.91479873704644e-10 1.17921756417547e-09 0 3.2068797117461e-06 9.18342196249715e-06 0 0 0 0.000696828678518137 3.8763151948193e-05 7.0299131155178e-05 4.74875839933923e-10 9.04625249058147e-11 4.4000483403857e-10 0.000282411240511996 0.000325578346138257 0.000313137528724911 0 1.0528255828912e-09 8.33117370134189e-10 0.000139040040250508 5.78063058512895e-05 3.64973437255285e-05 XR_236501.1 STRBP PREDICTED: Bos taurus spermatid perinuclear RNA binding protein (STRBP), transcript variant X4, misc_RNA. 0.0 7719 100.00 0.999066075180948 NR_026677.1 MIR600HG Homo sapiens MIR600 host gene (non-protein coding) (MIR600HG), 1e-108 399 72.37 0.17954704646276 0 noncoding 0 0 0 0 -0.284369791065679 0.207027819286019 NA NA TGCTGTTGAAGACAGAAGCTTTTATTTTTATTCATCCAAATGAGGAAAATGCAACATGTCAGGGCATTATAGACAAGCTGCAGCAGCCAGACAAGAGGGTCAGTCAGTCTGTTAGAGTCCAACACAGTCAGTGTGGAGGAGCCGCAGTGTGGACGCTGCCTATGGGAGTCGGGGTGCAGAGAGTCCCTGTGATGAAGGCCAGGCATCTCTGGGCGAGGCACTGGAGACAGTCCACACGTGCAGGCTGCTGCCTCAGCCTTACAGCTCAGAGTCCTGCGTGTACTCGCCGCCCCAGAGCGGGGACAATCCACGGTGCTCGTATTCGCCAATGTTTTTTTAATATAATACACAACATAGTTATTGCCAAGGACTTTGCACTGCAGTTATACTATGTACACTTTTGTATTCAGAAAAAAACACAGTAAATAGATAACACACGTATTTTATATAGATTTCTTAAAAGCTATCTTCATCACCAGACCAGAGTGAGAGCAAGTTAGCCAGAAGTTCGACGTCCTACGTGTAACTGTGCAGTAAACCAGAAATGTCTTCTACCCACAGCTACATTTGGCGCCGCCTGAACCCCTGTCCTGGCTGAGGGAGGGCTAAGACTGAGCAGGACCCCTTCCTCCTCTGTAAGGGACAGATGCCCCTTCAACAGCTCAGGGCTTCAGGTCTAGACTGGCTGCCTCCTTCCCAGTGAATTCTGCTCGGGATGGATGAGCAGCAAGTCTCAGCGGCCACCATCCGGGAACCCTACTACATGGCAGGCAGACCAGGGTGCCGGGACTGTGGGGCCAAGAGGCCCGGCCCACCTGCCTCCCTCCTGCACGTGGCCTGGCCCCACCTAGAGCTCCTTTAGGAGACCTGCCTTTTCCTCAACATGTGGCCGGGCCCCAGCCACTTAGACAAAGATTCAGCACAGCTGGGCCACCCGGTCCCCAGTCAGCTGAGCTCACAGGTACCGAGGGGACAACAGGCTCCACCACTGCTGAGCGCTGTAGTTAATGACGTCTGCCTGAGGCAGGTGGCTCACGACTCATTCAGACATCACGAGAGACAAAGGCGCCCCCTGACCAAGCATTCCCTTTGCGGCCTCAAGACCCTGGAAAGGAAGTCTGTCTGGAGGTTGACACCAGGTCATGAGACATCGGAACCACCCTTGATCCCTGGGACATGTGGAAAGGCCCCTGCCTCCTGAGAAGCCACCACAGTAAGGAACAAGGGGACCAGTGGTACTCCATGTCCGCATAGAGAACCCCACCGCACCACATAGGGCCGGCCTGGCAGGTGAAAGAAGAGGTATTTCAGGAACCTGACTGAACTCCCAACTGTCCCTCACGCAGGGGCCATCATCACTACCTGGGCATCAGGGCCGCAGCTGAGGGAGCCGGTGAGGTGAAGAGTCAAGGAGGCTCAAAGGTGCAATGCAAACAAGGAAAGGAGTGTAAGCTTAACCACAACTTAAGCCCGAGGGTGTTAGTGAGGAGAGGTGCTCATGCCATCCTGAAGGGAGCAGAGAAGAGGCTGGATACTGGGAATTAGGTTCAGCGTCCTTGATAATAAAGTACAAGTGGAGAAGACAGTCTTCTAGCTGTCTATGACTCATTTCCCTAAACAAAAATTTTAAAAAGTCTTCCCAGAACAAATATTTAGGTTAGATTCAAAAAAGAACTTTAGACCATCATCTGTTTCCCTAAGCAGGAAAATGAGACAGATGGTATCAAGGTCAGGACCATGGGCTAGGACAGGGCGACTCCACAAGGGTCTGGGTGCCCCGACACGAGTAAGCCTCCCTGTGAGGCCAGAGCTGCCGTGCAAGGATACGCCTGGTGCCAGAGCCAGCTGCACCTCTGGAAGATACGAGCCACATGCGTTGGAGTTACCTACTGGCATCCCAAGAGACCCACCAGGAGCCAGATGAGCCCAGCAACAACAGCGTGTGTGCCCTGCAGCCATGACTTCACAGCGACTATTTCCACCACCCTCACCTGATGCCACAAGCTCACTCAAGCGGGCAGTTCCTTAAAGTCCCCCACCAGTATGAGGCCTTTCCCACATCTGCCCAGCAGCTCAGGCAGCACCAAACCCCTCACCTGCTGGCTCCACCCCCAGAGGACCCACAGGCCACGTGAGGCTGGCCACACCCCCTCTCAGCTGGGGGCCTTGTCTCCTGAGCTGCAGGGGAGCCTCACCTACTCCCACAGGCGTCCACGCAGGCACTCATGCGATTCTGAAGCCAGCACCCTCCTGACTTCCATCCACATCACAGGAGAATGCTGGCAGCTCATAGCTCTGAACGTCACCTCGGTGCTCAGTCAACAGCTGTGCCCTTCGTTTGCCTAGAAACATCTCTGAGGGAAAATACCGTGGCCAGTAGAAAGTACTTGGTTTTTTTCATTGCCCCAACTTCACAGAGCACCTTGGGGCAGGCACCGTGTCCGATTTGCAGTCGTCCCTGGCGTCTGGGATGCACCTGAGCAGTGACTGCTCCAGCCTGTGCATCCCGCCTCAGCAGTTCACAGGCTTCATCTCCCTCCCACTCCTGCATAAGGCTTTCTTGCCAGGTGACTCCATTATGAAGCGAGGGAAGCCCGTCCCTAGCATTTTTCACCCTCATACACCAAGGCCCTCAGCCAGCATTAGACTAGAGACAAGGTTTCACTGATGTTGCCCTTGTAAGGGACTTCTGAATAGCAAGAGAGAAGCAGCACAAAGGTGGCAGACGTGGCCATGTCAAAAACTGGGCCCCTCATGCCACCGGCAGTCAGAAAAGCTGTCTGACTCGCAGGCCTCCCCTTCCCACTCGAGTTCCAACACGGTAAGCAAACTGGGTGAAAGTCCAGACTGTAACAAGCCTGATCTTCCCCAAGCAGAAGATCTTTCTAAAACATGTCTGTCATCATGGCACTGTCCTGAGCACAGCCTCCACACGGCTCCCTAGCACCCTTAGCTCACACGTTCCTCTCCGGAGCTGGTCACCGTGGCTTTCCCTCGTTTCAGCACCCGCTCCCCAAACAGGACCCACCTGAGCTCAAAACCTGACGTCCTTCTGGGCAAGAGCTACACACCTAACACATGCAGGAAGCCTTGTGGGAAGGTGGATGGGTCCAGGCAGCAGATGTGAGGAAACTTCCAGTCATGATTATGCCAGAGGGACTGGAAAGCAGGAACTGGAGAAGTGTGGCCCACAACTGTCTGTACACTGCTCAGCTGCTACAACGGCAGCACGGAGTGGCCATGACCACCGAACAGGCTATACAGCCTGAAAGACTTACCGACACCAAGCCTAAGGCAGCGTCCACGTTGTGACAACGTGGAAAGGCCCACTGGGCTGAACAGAGAGACTCCCGAACATCCCAAAGGCTTGATGGGCTGTGTCTCAGTGAACATTGACCTTTAGGGCTCTGACAAGTGCTCAAACCACCACTGCCTCTTGCTCCCCAGCAGAGCTACAGAACTGCAGACGTGCAGAAGCACCACCCTCTCCCCACCAACTCCTCCGAGCTCCCTGCCCACCTAGGCAGAATGAGCCAGAGTTGGCAGAACAAAACAGGCCCAAAGCAGATTTACTAGTAATCTTTAAATCCCACCTTTTCCTCTTTAAAGTACTTGTAGAACAACTGCATACCTCCCCTGGCTAAAGGCCTTTCTCTACAGATGCTGAATCCAAGGGACTCCACCCCTTGCCAGGTGAAGAGGCCTAAACATTACTTTAAAAAGCAGAAGCCCCTGTACCAATCAATGACCATCCAGTACCTGCCACTCCCTTGACGGGCAAACTCAGCAGAGCCGGCTACAAACCTCTCCATCCATCACCAAAAAGCTTCCCAGAGAGCACAGGAGGGGCATGGGGCGCCACGCCCACCAGACTCCCACTTCCTGGCCCAATGGAGGCAGTCTCTGCCACCCCCCATTCCTATGTTAGTCTCAGGCATCACCATCGTCCGTCACCTACTGCAGAGGGGCCCCTCGTGCCCTTGCTGGGTGTGGGTTCCTGTGGTTCCCTGGCCCCACAGCCTCCAGCCCAACCCAGGCAAGGAGCCTGGACGTGAAGAAATGCCCTCCCTGCCTCTCAGCCCGCTGGCTGCCTCCCTCAGCCAGCCGCCATCCTTCACCAGAGCACCTGCATCAGCCTCTCCATTCAGTCCGTCCTCATCCAGCTGTCCAAACTGACCTCCAGAGTCCTCTCACCATCCTGGAGGATGGTTATCACTGAGGGCAGAGCACCTTTCACAGAGTGGCCCCAGACTGCACACCCATGTGCCACTTCACCTTCCTCG TCONS_00025934 TCONS_00025935 TCONS_00025936 TCONS_00025937 TCONS_00025938 TCONS_00025940 TCONS_00025941 TCONS_00025942 TCONS_00025943 TCONS_00025944 TCONS_00025946 s 3' 2208 TCONS_00025934 TCONS_00025935 TCONS_00025936 TCONS_00025937 TCONS_00025938 TCONS_00025940 TCONS_00025941 TCONS_00025942 TCONS_00025943 TCONS_00025944 TCONS_00025946 s 3' 2208 EMBV3_24786 CAACTGTCAGCCGGATGGGACGTTTGCTTTGCACTCACTAATGAAAATAATATTGGGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18041 AATCGACCGCCCAGATCCTCTTCCGCTTCCTGACTGTGCTCTGATGTTTTCATCCCAAGA Gene GeneID:100295227|LOC100295227:XM_002695188:858_cdna Constitutive 0 NULL GeneID:100295227 18 GENE LOC100295227 NULL hypothetical protein LOC100295227 EMBV3_31754 ATCGTGAACGAGGGCTACCTCAACAGCCCCTCAGAAAGCGAGGAGTTCTGCATCTACAAC Gene GeneID:534995|SYNGR1:NM_001034623:85_cdna Constitutive 0 NULL GeneID:534995 5 GENE SYNGR1 MGC128630 synaptogyrin 1 EMBV3_26774 ATGCCATTTACGCCAAACCTGCGAACAAACAGGAAGATGAGGTGATGAGGGCCTACTTAC Gene GeneID:506596|ARPC3:NM_001034271:69_cdna Constitutive 0 NULL GeneID:506596 17 GENE ARPC3 MGC127675 actin related protein 2/3 complex, subunit 3, 21kDa EMBV3_03939 ATCAGTTCTACTGCTTGGCAATTTTGTCATTTTTGTCTAATTTCTTGTTACTACTGCTCT Gene GeneID:527841|BOLL:NM_001102115:122_cdna Constitutive 0 NULL GeneID:527841 2 GENE BOLL NULL bol, boule-like (Drosophila) EMBV3_25948 GGCTGTCCCTTCTCTGAGCCACCTGTGGCAGATTAATGTTTGCTGAAGAGCTAATCTGAC Gene BVT0102_120584 - 1 EMBV3_13797 GK000018.2:45564334-45687883 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36130 CCCTCTCCCTCCAGGCTGAGAACACTTTCAATTCACTTCTCACAGTTTTAACTTTCTGTC Gene BVT0102_040846 - 0 NULL GK000024.2:43311184-43322049 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140323 TCONS_00140321 TCONS_00140322 TCONS_00140324 1 XLOC_085105 Coding TCONS_00140321 XLOC_085105 Coding Coding SPIRE1 24:43310954-43454222 j TSS104767 5675 1 TCONS_00140321_4 584 0.0223788546255507 17 0.960507304543265 0.000498954743201056 0.00087846960348247 0.000790715957478542 1.27488164958412e-13 0.000469110619048658 0.000106772672239576 0.000210264161627904 0.000853653289181889 0.0010411982100972 7.10201452789804e-05 1.59483412089473e-05 0.000386096371647615 2.7592696418449e-14 0.000346352048870004 0.000525570738188844 0.000574835190904127 0.00048886729056123 6.56448359547795e-05 0.000408719591613342 9.63099804947595e-26 5.67093519422304e-05 0.000293522224804552 0.000243106942374195 0.000162541421328379 9.34755773983534e-11 0.000241952516035332 0.000250362267234458 5.83811320123059e-05 9.88083400705099e-05 0.000926327788323846 XM_005196765.1 SPIRE1 PREDICTED: Bos taurus spire homolog 1 (Drosophila) (SPIRE1), 0.0 5790 100.00 0.565462555066079 NM_020148.2 SPIRE1 Homo sapiens spire-type actin nucleation factor 1 (SPIRE1), 0.0 2798 77.89 0.594361233480176 TCONS_00140321_4 sp|Q52KF3|SPIR1_MOUSE SPIR1_MOUSE Protein spire homolog 1; 0.0 1030 87.63 0.998287671232877 0 coding 0 0 0 0 0.22280873996062 0.322204037901807 -0.170992151852339 0.0774622476260679 ATACTTGAAGAAGATAGAGAATAAATATGATAAGTAAAGGTTATAGAATCTTTGGGAATTATTATTTATAAGGCACTGGACTATGGCTTGAAGGAGAATGAAGAAAGGGAGTTAAGCCCACCACTGGAGCAGCTCATTGATCGCATGGCCAACACGGTAGAGGCTGACGGCAGCAATGACGAGGGCTACGAGGCTGCGGATGAGGGTCTGGAGGAGGATGATGACGTAAAGAGGAAGGTCTCAGCCATCCGGTCCTATAAAGATGTCATGAAGTTGTGTGCTGCTCATCTCCCGACTGAAGCAGAGGCACCAAATCATTACCAGGCAGTATGTCGTGCACTGTTTGCAGAGACGATGGAGCTGCATACATTTCTGACCAAAATCAAGAGTGCGAAGGAGAATCTGAAGAAGATTCAAGAAATGGAGAAGAGTGATGAATCTAACACAGACCTGGAAGAGCTGAAAAATGCTGACTGGGCTCGGTTCTGGGTACAGGTGATGAGGGATTTGCGGAATGGAGTAAAGCTCAAGAAGGTCCAGGAGCGGCAGTACAACCCGCTGCCCATTGAATATCAGCTCACCCCATACGAGATGCTAATGGATGACATTCGATCCAGAAGATACACTTTGCGAAAAGTGATGGTGAATGGTGATATTCCCCCTCGGTTAAAAAAAAGTGCTCATGAAATCATCCTGGACTTCATCCGATCAAGGCCTCCTTTAAATCCAGCCTCAGCCAGAAAACTGAAACCTACTCCACCACGGCCCCGGAGCCTCCACGAAAGAATCCTGGAAGAGATCAAGGCTGAGAGGAAGCTGCGGCCTGTGTCCCCCGAGGAGACCAGACGCAGCAGGCTCGAGGTGACAACCGCTGAATCTCCCAAGAATGTTGCAGAATCATCCATGGTGAATGGAGGTGTGGCGTCACAGCCCAGAGAAGGTGGGTCAGGAGCCGCCCAGCAGGTGCCTGTGCCGCGGAAGAAACTCCTCAAAGCCCCGACTCTGGCTGAGCTGGACAGCTCCGACTCAGAGGAGGAGACCCTGCCCAGGTCTGCCAGCAGCAGCAGTGCATCTCCCTCCTTCCTGGAAGACCCCTTCCTGGAGACCGTGTCCACAAGGAAGAACCCTCCCAAGTTCTTGCCCATATCCTCCACACCTCAGCCTGAGCGACGGCAGCCACCCCAGAGACGACATTCCATTGAGAAGGAAACACCCACTAATGTGAGACAGTTCCTGCCGGCATCCAGGCAGAGCTCCCGGTCTCTTGAGGAGTTCTGCTACCCAGTGGAGTGCCTGGCACTGACCGTGGAGGAGGTGATGCACATTCGTCAGGTCCTGGTCAAAGCAGAGCTGGAAAAGTACCAGCAATACAAAGATGTCTACACGGCTCTGAAAAAAGGAAAGCTCTGCTTTTGTTGCCGAACCAGAAGGTTTTCCTTCTTCACCTGGTCTTATACCTGTCAGTTCTGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGCCCTCCAAGCCATACTCCACCCTTCCTATCTTTTCACTGGGACCGTCTGCCTTGCAGAGAGGGGAAAGCTGTATGAGGCCAGAAAAACCCTCCACTGGCCACCATCGGCCACTTCGGAGCATTGCCAGGTTGTCCTCAAAATCCAAGTCTGTGGACAAATCAGATGAAGAACTCCAATTTCCCAAAGAGCTGGTGGAGGACTGGAGTGCTATGGAGGTGTGTGTGGACTGCAAAAAGTTCATTTCTGAGATCATCAGCTCAAGCCGCCACAGTCTGGTGTTGGCCAACAAGAGAGCTCGATTGAAGAGGAAGACGCAGTCCTTCTACATGTCCTCAGCAGGCCCCTCAGAGTACTGCCCCTCAGAGAGGACCATCAGTGAGGTCTGAGCCCCGTGCCTTCCTGTGGGAGTCGAGTTCCTGTGAGGACGCTGAGCAGGCTGTCACTGTCTCCTCAATGTGGTTAACTGGCTTGGGTTTGCGTGAGAATCAGGGTTTTGCTGTGTTGCATTGTTCCACAGACTAAATGCTGTGTTCATGTCAATTGAGAACACATGACCAGTCGCCAGTTGCTCATCTGCACTAAGAGGACAGTAGTTTGAAACTTGATTTTGTGTGATTATAGATTTGGAGGCCAGAAACATTCCTCTTAGTTCTTTACTGTGCCTGAAATAATGTTCTAGGGCAGAAAGGTTCTCGTGTGAGGAATCAGTCTAGCGCAGGCCTAGGGGCCAGCAAGGTCTAAGCAGTAAGTCATATTGGCATTTCCACTGACAGTGTTCCTACCTGATGGACACAGACCCCTGGAGGCCTCACAGCACAGAACCTGCAAGGGTTTGCTTGTGCGTCAAACTGGTTTTAAGTTATTGTTGCTCTGAGACACTTGGGAAGGGCTCTCCACTGCCTCCCAGGACAAGCATCGGAGCTGTAGGCCTAGGGGGGTGCCTGTGTCCCTGGGCAGCAAGGCAGTGTCTCCTGAGCAAGTGCTAGGCTGTTTTTACCTTGAATGTATTACTGTTACTAGTAGTTGCATATTGGAGGTCTAAGAAAGTTTTGTGGCATCATGGGACAAAGGCAGGCTAGAAGTTTGTCCAGAAGCTCAGTACTTTGGCCTCTTAGAAGAATGGCTGTGAGCACCCACCTTTCCAGCAGCAATTTTCATACTTTACAGTCTCACCATCATGACTAAATTAAGCCACAATTTGGTACATAAGGTCTCAAACTGAAATTTATTTTTATAAATGAATTTTAAAGGAAAACCATGGTCTAGTCTTTTAAAATTACTAGAAAATTAACCTGCCGATAAGCTTTTTGGATGTTTTGCACACATTTTCCTTTTAAGCGACTTGAGTGGGTAGGGTGGGCTTTGATGAAGCCGAGCTGGAGGCAGCACCGTACACCTGTCATTTCTCAGCTGTGTGGTCTGTTCCGTGGCATCTCTCTCTGTGGTTCTGGTTGGCTCAGTGGTGACCAGCCAGTCACATTCACAAGCCTGGTTAATGCACCAGGCCACTTTCTGACACACTCTGGGACACGTCTGCAGTCAACACTGGAGACAGCACTGCTCACCAAAAGGCATGGCAGTCACTCTACGCCCCCTCAACATTTCTATAGGGAATTAACAGTAATACCTCAGAACTGCTCTGGTAGTGGTTTTTCATGGTGGAAATTTATAAGTTAGTAAATTGCTTAAAATTACTTACACTTGCAAAATAAACTTTACCAATTGACTAATTAATGCATGTTAACAATTTGTATTTGCATGTAAAAGTGGGCCACCAGAAAACCCTGATTATGGAAATATTTACTGTTTTAAAGAGGCTCATGTGAGAGCTTCAAATGTTACATTGAGTGAATCTTGTTTGTACAGTTTTCCAAGGGACAGTTTCAACTCTAGACCCCTTATAGATTGGCCTGAGCCTCTAGACCATCCCCAGGACAGGTGCAAGGAAGACAGGAGTAGGGGTGGGTGTTTGTGTCCGTGGAAAAAACAGACCCAGGAGAGTGTGCTTTTTAAAATAATGACTAGTTTATAGGTGTTTCTAAAATACAAAAAACTAACCCCTCCCCTGAAATGAGAATACCATTCACATGGCAAAATCTAGCCCATGTGATCCTTGACTTCACTGCTCCGGGTTTGTGACACTGTTTAACTACTGGGACATCGTGAGCAGCAGGTTTCCATGGGACAGTTTGCAGAAGAGTAGAAAAGGGCACATGGCACAGCTGAGATTGTAGAAATCAAATCCGCATCCCTTTCTGGTGCCAAACAAGTTCCCACATCCGTGGCGTGTGTCCGCCACCTCAACCAAACTGGATAATTCCAGAGGGTCATCCACTGCTGGCCTGTGGGGCATGTTTTCACAGTCCTTAGCCTTGCCCCCCGCCCTCCCTCCCTCCCTCCCTTGGATCCCAGGCTGCTCTTTGTGCTGCTTCTGGCACTTACTTCTGGTCTGACAACAGCTTCGCTGGCTGGCTGGCCTCGGGTGGAATCTGATGTGTGTCTGCGCACTGACCGTCATTCTCACCCTCTCCCTCCAGGCTGAGAACACTTTCAATTCACTTCTCACAGTTTTAACTTTCTGTCAGTGTCAGGAAAGATAGCAAAGCTTGTAAATACTGTAATATATTTATTGGTATTTGGAGGGCATTCATTCAGTGGACAATGAGAATTAACTCTCCCAACACAAGTAGAACTTAAGTACATCAACTTAATAGTCTCACTAGATTTCAAGTCTTAAGCCTTTCAAATTAAACCAGAAAGTTGTCATGTAGGAGTTTTTAAAATGATCTTACATTTGATGAGATCCCATGATCTCATAAACTCACATCATGGTCAGCACCATGAACTCATGCCATGAATTTTTTAAGACTCTTATTTTTCTAACTGTATTAATAAATGTCAGACTGGATTTTAGGTGTCACATAGGAAAGTTTTAAATTATATTGCTATTTGCTAGAGCAAAACAGCAGACAATTTTGTACGTGCAGAACTGTTGTAGGGCCATGGAGAAATGTGTACACGTTGACCTGGCTTCTTGCGTGTATAAAGTCCAGGCACTGCTGGCATTCAGCGTAACATGACGCTACCAAACATTTTCCATTAAAGTCTTTTAAAATTTATTGAGGAGAAAATAAATGACTTTCCATCATACGTTACGTGTGGAGTTCCTATTATAAAATCGTGCTATCTTTTGGTGACTAGCTGTTTGAAACCACCTAGTTTGGAAACACAAGATACATTTATGTGACATCAGCAGTTTACGATCAGCTTGAGAAATACAACCTGCAAGGACCACACTGAGAACATAAATGAAAATGAGCTCCCACTGTAACTGCTGTGTCATCAAGCAGCCTGCTTCCTTTGTCACCTTGCAGGGTAGGAAACTAAAATCTACAAATTGTCTCCATAGTTGTACAATATTTAGAAAGCATTTTTTTTTCCTAAATAGAATTCCTTATGCTATGTGTTCTTATAATGTCCCATGAAACAAAATTTCTTGTTGTAGCTCTTAAAGGCTTGAGTTTAAACCCAGAATGAATTTAGGAAGGTTCTGTCTTTATGTTAATTAGAGAGCATCCTTGGCGTTTTACGTGCCTTAAACCTTAGGTGATACTGAGTGTGATATTAATCTATTACTTATTTGCCAGATGTATTTTAAGCTCTTCTTGCAGTAGGTTCCTGTGACAGGTGTGTGACAAGACCTCAGCTCGTAATCCACATGCTCGCTGACTGAGTCCAGGGCACAGCCCTTGCCTTGCTGCTCCTAGGTTCTGGAGACATCGGGACCAGGAAGGGAAGCTCTGGGCCTCCCTTATTCAACTGCGCCTTTCCTTCTCCTTTCCGGCCCCTGCAAAACCACCCTGCCAACTCCAGGCTGTGAAGGAAAGTGCAGCATTTACTGCAGGATACCAACACGGAGTTAGCACAGAGAACGGGCAACTTGTGACCAAACAGCCAAACTCTCTGACAGCTTTCAGCGGCCCAGCCCTGGAGCAACACAGAGAGAAGCCAGTGCGCTGTCAGAGGTCGTCCTGCTGTCTCACCGAGGAGCAGACAGCGAGCTACGCAGGTCAAGTGAACGCAAAGGAGACACCAGGCCGAGAAACAAGGCAGGCGACACACACAATTCCAGCCCCAGCCAGAGCTCCACGGAGCCTCACCC EMBV3_17159 GTTGTGACCCACCGCACCCTCGCTCCATGAGAATGTAACTCTCTCTAGTACTTTCTGAGG Gene BVV0102_268717 + 0 NULL GK000017.2:24102025-24418687 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00079517 1 XLOC_048402 NonCoding TCONS_00079517 XLOC_048402 NonCoding NonCoding - 17:24217268-24218734 - TSS59457 1466 6 TCONS_00079517_2 66 0.980900409276944 1 0 0 0 0 0 5.61297872051126e-07 2.44001318254284e-06 3.97797276866127e-06 4.48287751013225e-07 0 8.65373909833446e-06 1.85300235310752e-05 3.06424437468465e-05 3.82820760627298e-05 1.30686215141802e-05 0.000360585254040897 0.00632247434085013 1.2354430419404e-05 0.000643696277679545 0 0 0 0.000379315958925943 0.000239051256132182 0.00167455392975283 0 0 3.63335679210061e-07 4.67996902890661e-05 9.02966510673307e-05 0.000108679805696685 XM_005196241.1 WDR73 PREDICTED: Bos taurus WD repeat domain 73 (WDR73), mRNA. 6e-151 538 72.20 0.637107776261937 0 noncoding TTCGGTGAGTGAGGCCCATAACTTTATTTTCAAAAGGAACTTTTATACCTTGACTTGTACATAGAGGGAAATGAAAGATGCAAAGTCATACAGAGTCAGCCCAAACATTACATCTGTTTTGTCTTTATCAAAACCAGGATTTTTTTTGCATACCTTTCCCATAAACAATGTTGTGTACATTATCTTCTGGCCTTGGAGGCCTGTGGACATTTTATGACCCTTTTTTGATAAAGGCTGCTCAACCAGAAAACTTGTTTTCTCTTAAAGTGTTTCTTCTTTATTTCTCCCAGCCTCAGAAAGTACTAGAGAGAGTTACATTCTCATGGAGCGAAGGTGCGGTGGGTCACAACAAAGAAAGAACCAATTAGCTCAAAGGTCTGATGTGGTTAATTCCAAGGCTGCTACTTGTTTTTCTTACATTCCAACTACGTTAACGAATGCACTCCCAGGTTCACAATGGATAAGGGATATGGGAACTTGGCAGCAAGCATTGGCCTAATAATGAAGCCCTTTACCAGTACTATCTATTCTAATAATTTTTCATCCCTTAAAGGACTCTATGCTCATTAGGACTTTTAGAATGTTTTGGCTTCCCGTGCCTTTCAAGTTTGGGGAGTTGTGAACAATCATGTGTGTTAATTGCAAGAGTATGGATAAACCTGTCAAGCAAGCTATGATTGCCAACTATGATTGCCAAGCTATGATCAAGAAAGCCAACAGAGGGGTTAAAATAGAAATATTCCTTTCATGCCCAGGAGACTTATTAACTAAAGCCCTAAGTTGACATTTTCCAGAGAAATGTGGTCGGGGATAGCCCCCTGTTAATGTCAGAAGAGTTGGTAAAAGGCACAAAATAGTAAGACAGACAGATTCTGGTTTTGGGGTGGATGCTTGAGCAGATTCAGGGGGTCCCTCGAGGCCTGATCCGCCTTTGCCTGTCCGGTCTTTTCCGCATGGGATCTCCCACGGTGGCTCCTGGCAAGGTCCATCTAGTCAAGGCTATGGTTTTTCCAGTAGTCACATATGGATGTCAGAATTGTACTATAAAGAAAGCTGAGCACTGAATAATTGATGCTTTTGAACGTGGTGTTGGAGAATCTTGAGTCCCTTTCACTACAAGGATATCTAGCCAGTCAATCCTAAAGGAAATCATTCCTGAATTTTCAATGGAAGGACCTATCCTGAAGCTGAAACTGCAATATTTTGGCCACCTGATATGAAGAACTAACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTGGGAGGAGAAGGGGACGGCAGAGGATGAGATACTTGGATGGCAATGCCGATGCGGTGCACATGAGTGTGAGTAGGCTTCAGGAGTTGGTGATGGACAGGGAAGCCTGGCGCGCTGCAGTCCATGCAGTCTCAAAGAGTCGGACATGACTGAGCGACTGAACTGTCTGACTGATGCTCCAAAATCACCGCAGATAGTGA TCONS_00075095 . 5' 200041 TCONS_00075095 . 5' 200041 EMBV3_31188 CAGAAAATCTCTCCCGCAGCCCTGTGTCAAATGGGGACTGTATAAGAACATCTTCTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00702 TGACGGTGTAGAGGACCTTCGCTGCAAATACGTCTCAACTCCCGGCCCAAGCTCAAGGCC Variant GeneID:281806|GSTP1:NM_177516:461_cdna 384^618 2 EMBV3_05832 GeneID:281806 29 GENE GSTP1 NULL glutathione S-transferase pi 1 EMBV3_37434 CATGGACAAGGACTGTCTGCGCACTGGGGACAAGGCCACCGTTCATTTCCGCTTCATCAA Gene GeneID:513922|GTPBP1:NM_001017938:58_cdna Constitutive 0 NULL GeneID:513922 5 GENE GTPBP1 NULL GTP binding protein 1 EMBV3_43472 ATGGTAGCTGCTGAGGCTGCAAGCAAGGAAGTCGCGGAGCTATATAATGGGTATGAGGTA Gene GeneID:100337335|LOC100337335:XM_002686518:696_cdna Constitutive 0 NULL GeneID:100337335 3 GENE LOC100337335 NULL hypothetical protein LOC100337335 EMBV3_21513 CTGCCTCCATCACACATGCTCCCTCCTTTCCTTGTGGCCAGGTTAATAATTGCCTGGATT Gene GeneID:614786|WWTR1:XM_002685024:194_cdna Constitutive 0 NULL GeneID:614786 1 GENE WWTR1 NULL WW domain containing transcription regulator 1 EMBV3_40120 GAGCAGTTCTTTTCCAGTGTTTTTCGAATCAGCTCACCAGGGTTACAACTTTGGACACAC Gene GeneID:539498|LOC539498:XM_002685484:205_cdna Constitutive 1 NULL GeneID:539498 2 GENE LOC539498 NULL similar to JmjC domain-containing protein C2orf60 EMBV3_04577 AAGTGTCTCTGCAAAACTTCCGTGTTGGTGGTGAAGAGCTCGGACTGATGTTCAGCGTGT Gene GeneID:618701|LOC618701:NM_001099723:2_cdna Constitutive 0 NULL GeneID:618701 X GENE LOC618701 NULL hypothetical LOC618701 EMBV3_17892 ATTGAACAAGCAACCGTCCATTCTAGCATGAGAAATGCCATTGAGCGTTTTTGTGGGGAG Variant GeneID:100141021|CYFIP1:XM_002685194:30_cdna 287^466 1 EMBV3_18123 GeneID:100141021 2 GENE CYFIP1 NULL cytoplasmic FMR1 interacting protein 1 EMBV3_19161 TTGCCCCAAAGCCCCCAAGTTAGAGGAAAGGAACTGAAAGAAAACGGGGAGTTGCTGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32480 AAAACAACCGATGTGTGTTTGAAAGCTGGGTGTGTGACTCTCAGGACGACTGCGGCGACG Gene GeneID:519993|LRP12:XM_002692755:92_cdna UTR3_Alt 2 NULL GeneID:519993 14 GENE LRP12 NULL low density lipoprotein receptor-related protein 12 EMBV3_25908 CTTCCAATGCAAGGGGTGCAAGTTCGATCCTTGGTCAGGGTAGCTAAGAACCAGCATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40299 AGAGGCCTGGGAGGAGTTCACGGAGTTCGCAAAAGCCAAAGGGTTGAACCTGGAGATCTT Gene GeneID:511158|LCN1:XM_002691709:75_cdna Constitutive 0 NULL GeneID:511158 11 GENE LCN1 NULL lipocalin 1 (tear prealbumin) EMBV3_02460 GGTCGTGGGGACTATAACCGATGATGTTCGTGTCCTCCTCTCTGGTCCTCGTAAGGGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13306 GAATTTGCCCCAAACAGGAACACATAGCAGGTAAAGATGAGCCCAGCAGCTACACATGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14611 TGCAGTTTATCCGAAGTCAAGAAATGCTGTCAGCACACCAGTGTTCAACCTCTGTATTCC Gene GeneID:506967|ATF1:NM_001075289:44_cdna UTR3_Alt 2 NULL GeneID:506967 5 GENE ATF1 MGC143110 activating transcription factor 1 EMBV3_07519 GAAAGAGCTACAATCAGCCACAATCAATGACATGAGCCCCTACATAAAGGTTGCTCCAGG Gene GeneID:494004|APOB:XM_002691511:497_cdna Constitutive 0 NULL GeneID:494004 11 GENE APOB APOB-100 ApoB(100) apolipoprotein B EMBV3_13173 CCCACTGGTGGCCGACTGGTCACTCACTGTCCTGTTCACCTCTTTTCCTGTTGTATATAT Gene GeneID:513662|LOC513662:XM_002699322:157_cdna Constitutive 0 NULL GeneID:513662 29 GENE LOC513662 NULL hypothetical LOC513662 EMBV3_40126 AGGGGCACCTCAAGGAGAAATTCCAGGTGATGAACCTTTTGTAAACTGACCTGAGTGGGG Gene GeneID:281453|RGS9:NM_174170:7_cdna Constitutive 0 NULL GeneID:281453 19 GENE RGS9 MGC159844 regulator of G-protein signaling 9 EMBV3_40821 TCTCCTGTCCACGACTCCTATGGAAAACAGGGTGGACCCATGGGAGTGCTACCAGGACAC Variant GeneID:511042|NMNAT2:NM_001075486:23_cdna 292^359 1 EMBV3_37942 GeneID:511042 16 GENE NMNAT2 MGC143148 nicotinamide nucleotide adenylyltransferase 2 EMBV3_21884 GAACCAGCTAAGTCTGCTCCTGCCCCTAAAAAGGGATCTAAAAAAGCTGTGACCAAGGCC Gene GeneID:519069|LOC519069:XM_002692063:20_cdna Constitutive 0 NULL GeneID:519069 13 GENE LOC519069 NULL similar to histone cluster 1, H2bd EMBV3_40863 GTGGTCTAGGGATGGGGGCCATGGAGCAAGAGGCATAACTCTCCCAGACTTCAGATAATA Gene GeneID:281702|CNGB1:NM_001135640:37_cdna Constitutive 0 NULL GeneID:281702 18 GENE CNGB1 GARP cyclic nucleotide gated channel beta 1 EMBV3_18494 CTCATTCCTTCCCAGGACTTGGTTCTTGCTGGGCTGAGCAGCTGGTGAATCTGACACACT Gene BVT0102_365584 + 1 EMBV3_34982 GK000016.2:29840791-29873659 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11874 AAGGTCCCGGGGTGGTGACACTCCTGCCAGCCCCAAAGCCACATTATATCTCCCAAACCT Gene BVV0102_111101 + 0 NULL GK000016.2:50556852-50569894 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18948 GAGGGCTTTTCTGTTGCAGAACTTGGGTGAGGTACTTGCTGTTGGTATTATCCCAGGGAC Gene BVV0102_274449 + 0 NULL GK000027.2:25973544-25993309 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40472 GGGAATGAAGACACCGTGAGCCGGCTGGAGAGGCATCGATGTTGTGAGGAACAAAATCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29531 CACATCTACCAAGTGGGCTCTTCATTCCAGCGGCACGGTTGGGTGTCCATTGTCTTCACT Gene GeneID:536989|PLXDC1:NM_001099077:147_cdna Constitutive 0 NULL GeneID:536989 19 GENE PLXDC1 MGC160028 plexin domain containing 1 EMBV3_35426 GAGCATCAGAAAATCCATACTGGAGAAAGACCTTACGAGTGCAGCAGATGTCACAAAGCC Gene GeneID:504913|ZNF548:XM_002695486:229_cdna Constitutive 0 NULL GeneID:504913 18 GENE ZNF548 NULL zinc finger protein 548 EMBV3_09896 GACCTCGAAGCCACTTTTAGACTTCTTGTGGCTCTTGGGACACTTGTCAGTGATGATTCC Gene GeneID:506073|PLAA:NM_001105335:5_cdna Constitutive 0 NULL GeneID:506073 8 GENE PLAA NULL phospholipase A2-activating protein EMBV3_14160 CTTAGTTTCCTAACCAGAAATTCAACCCCGTGCCCCCTACAGTGGAAGCTCAGAGTCTCA Gene BVV0102_344301 + 1 EMBV3_28740 GK000005.2:113420038-113437813 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29235 AGGGCCCGAAAGAAGCGGAAACCCTACACAAAGCAGCAGATTGCGGAACTGGAGAATGAA Gene GeneID:520423|HOXD12:XM_002685313:156_cdna Constitutive 0 NULL GeneID:520423 2 GENE HOXD12 NULL homeobox D12 EMBV3_23529 GACTTCGAACTGAGGGAGCATGAGCCATTTGCAGAACTTACTGTTAGATACACTCCTGGG Gene GeneID:508874|PFN4:NM_001075377:90_cdna Constitutive 1 NULL GeneID:508874 11 GENE PFN4 MGC137440 profilin family, member 4 EMBV3_19934 CACGATTTATTACAAAGAGCCTTCAACAGGTTACTTCAGTCGCCACAGCAGTTTGCGGGG Gene BVV0102_042915 + 0 NULL GK000006.2:100183161-101090296 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41177 GGACCCTACAGTCCTTGTCCCCATGTCCTCTGCCTCCTTCTGTCTGTGGAAAAATTCTAA Gene BVV0102_165220 + 1 EMBV3_40026 GK000024.2:41977867-41986505 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139033 1 XLOC_084792 NonCoding TCONS_00139033 XLOC_084792 NonCoding NonCoding - 24:41978999-41980227 - TSS104069 636 1 TCONS_00139033_1 57 0.223270440251572 2 0.483292583537082 0 0 1.45503094107009e-05 0 0 0 0 0 0 0 3.59934626897209e-06 0 0 0 0 0.00199332868880935 0 0.000591767205051073 0 0 0 0 1.44246011678439e-05 0 0 0 0 0 0 0.00180556480380841 XR_238040.1 LOC101907673 PREDICTED: Bos taurus uncharacterized LOC101907673 (LOC101907673), 3e-17 93.3 90.91 0.102201257861635 NM_016116.2 ASB4 Homo sapiens ankyrin repeat and SOCS box containing 4 (ASB4), 2e-06 57.2 78.26 0.0990566037735849 0 noncoding 0 0 0 0 -0.0364584618901272 0.749083125936705 0.0153157808836274 0.791809604871807 AGAGAGCAGAAAACCTTGAACGTACAGTCTAATCGGAGATACTTCAGATGGAAGCCCTGTTAAAGCCATCTGGTTCCCTGAACTAGTGACACTGCAGGCTGGATATGGTGGAAGGAGCAGTTTGTCCTCCAGAAAGCATCAAGAAGCTCTGGCTCTTAGAATTTTTCCACAGACAGAAGGAGGCAGAGGACATGGGGACAAGGACTGTAGGGTCCTGCTCCATTTCAGACAAAGAAGTAGACAAAAGTCCAAAAACGTCAGTAATTCCAAGAGTGTGAACAAGCAGATGCTGGCAAGCAGGTAAAAGTAGGAAACCAACTGCCTTCCTGTGGGTTTTTTGGCGTGGGTTGGTTTTATTGTTTTAATTATTTTGTTGTGTTTAGCCCTCCCCAGCTCAAGTCTCGAAAGAACTCTTGTCTCAGAATTGCTCTGTCTCCCCGTGGCATAAAACATCATCACAGCTGTGATACCGTCTTATGTCCCCTCTTACCTGCCTGGAACCATTCGCCTCTCAGTTCATACCCATGAGTTTCAGAGTGGAAGCAAGGTTTCCAGACAATGAAGACTGCTCATACTAAGTGAAGTAAGTCAGAAAGGGAAAGACAAATACCATATCATTTATATGTGGAATCTAAC TCONS_00139023 TCONS_00139024 TCONS_00139026 TCONS_00139027 TCONS_00139028 TCONS_00139030 TCONS_00139031 TCONS_00139032 s 3' 1134 TCONS_00139023 TCONS_00139024 TCONS_00139026 TCONS_00139027 TCONS_00139028 TCONS_00139030 TCONS_00139031 TCONS_00139032 s 3' 1134 EMBV3_07380 TTGGTTAAGCTGGTTGGTTTGATTTTCACTGTGTCTGGGGAGCTGGCCTCTATATGTGGG Gene BVT0102_110643 + 0 NULL GK000021.2:30897315-30902154 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00866 TCGGGCAGGGCGGACCCTTCTCCTACCTCGGTCAGTACAGGACAGTTCTTGTCTCTGCAA Gene BVV0102_234936 + 0 NULL GK000017.2:45063290-45107092 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11599 TATGCCTGGACGCGAGCAGCAGAGTTTGGAGAGGAAGTTACGACCAAGTGAAAGCTCTTA Gene GeneID:529929|DDX19A:NM_001034571:115_cdna Constitutive 0 NULL GeneID:529929 18 GENE DDX19A MGC128358 DEAD (Asp-Glu-Ala-As) box polypeptide 19A EMBV3_19134 AGCTTCGCAACCTCACCAAGGGCGCCTGCTACCTAGAGCAGGTGGAAGTGAACTACTGCA Gene GeneID:282659|SSPO:NM_174706:568_cdna Constitutive 0 NULL GeneID:282659 4 GENE SSPO NULL SCO-spondin homolog (Bos taurus) EMBV3_15934 AGCAGATACAGTCTCTTAGTCACTAGGCTTTGCATTGTATGTAGCCGTACGTTTCCATCC Gene GeneID:784747|LOC784747:XR_084585:163_cdna Constitutive 0 NULL GeneID:784747 14 PSEUDO LOC784747 NULL similar to Zinc finger protein ZFPM2 (Zinc finger protein multitype 2) (Friend of GATA protein 2) (FOG-2) (hFOG-2) EMBV3_30413 GGGGCTTAGACAAACGTATAGTGATATTACAGAGCATCATACAGCGTGGCTTCCGGCCGT Gene BVV0102_174169 - 1 EMBV3_08962 GK000027.2:41883543-41930647 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11212 GACAAAATGAAAACAGTCCAAAGAAAAGATGATATGAGGAATTGACCTGGTGAGCAAAGG Gene BVV0102_286270 + 0 NULL GK000030.2:82819410-83004267 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252239 1 XLOC_155180 NonCoding TCONS_00252239 XLOC_155180 NonCoding NonCoding - X:82977293-82977534 - TSS189460 241 1 TCONS_00252239_1 41 0.995850622406639 1 0 0 0 0 0 0.000286806514180131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_002699145.3 LOC100300342 PREDICTED: Bos taurus olfactory receptor, family 8, subfamily B, member 3-like (LOC100300342), mRNA. 2e-09 66.2 77.01 0.344398340248963 0 noncoding 0 0 0 0 -0.0269465007370008 0.857680550830987 0.0220488126776915 0.650099587916505 TATTTTTAATTGCTGAATATCAATTTTGGTTTCCTTTGCTCACCAGGTCAATTCCTCATATCATCTTTTCTTTGGACTGTTTTCATTTTGTCAGTGTGTGTGTATGGGTGTGTGTGTATGTTCCTTCATTTTTATCATTTGTCTGATTTTGTATTTACCATTTCTCTGGGGTTCATCTTTTGTTTGTTGAATTGGTTTGTTTTGGGGGTTTGTGTGCTTATTTTAATCCCCTTAGTGCCAT TCONS_00244832 . 5' 26656 TCONS_00244832 . 5' 26656 EMBV3_26239 TCTTCATGCGCAGCGACCACCTGGCCAAACACATGAAAACCCACGAGGGCACCAAAGAGG Gene GeneID:540288|SP6:XM_002695916:277_cdna Constitutive 0 NULL GeneID:540288 19 GENE SP6 NULL Sp6 transcription factor EMBV3_02956 TTATTAAAAACTCTCAAGCGGGAAGGCATGAACCAACTCCGGTACCCTCCCAACAGCCAG Gene GeneID:513967|ALDH3A2:NM_001101984:30_cdna UTR3_Alt 3 NULL GeneID:513967 19 GENE ALDH3A2 MGC166026 aldehyde dehydrogenase 3 family, member A2 EMBV3_09145 GCTCACGCTCCACAGGATGAAGTCACTGTGCATATAAAGAGCAAGCATTTGTGCACTGCC Gene BVT0102_041313 - 1 EMBV3_33895 GK000025.2:39046037-39050620 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147346 TCONS_00147345 TCONS_00147348 TCONS_00147354 TCONS_00147347 TCONS_00147352 TCONS_00147353 1 XLOC_089348 Coding TCONS_00147352 XLOC_089348 NonCoding Coding - 25:39046238-39050447 - TSS109963 4033 1 TCONS_00147352_8 106 0.314902058021324 2 0.0420627376425855 0 6.55678478073188e-266 0 0 1.99243467920018e-82 0 0 0 1.68551165657418e-19 7.50938650118448e-28 1.53627924195597e-08 5.0823361373386e-52 1.98357472890911e-19 0.000218919303652166 9.84205114872512e-05 0.000248230903503019 1.24021431638276e-05 0.00142129180032586 0 0 0 7.71322012167483e-05 0.000943458891884712 0.000243804915733649 0 6.10415609663291e-35 5.38303338926113e-115 1.29199948408572e-15 1.65236427782996e-18 0.000148594316487462 XM_005225076.1 ZNF12 PREDICTED: Bos taurus zinc finger protein 12 (ZNF12), transcript 0.0 3912 100.00 0.537565088023804 XR_242099.1 ZNF12 PREDICTED: Homo sapiens zinc finger protein 12 (ZNF12), transcript 1e-146 526 68.06 0.385569055293826 0 noncoding GTTGTATGTTCGGCTTGAATCATGTTTGAAAAGGCATTGTATCCTTATTAGAGTAATTTCTAAGGTATTTTAAGTAGCACCACTATGCTAGCATCTAAATATGTATAGATAATGAACTAATATTTGAAAGATATGAAGTATACTTCTCTTTGTGCTCTTCCCTAGCATTTATAAATGGATTTTATTGTTGTTAATGAATTAAGTCTTCCATAAGGAAACCAATGTTTTTAATAGTGTTTTAACTGTATCTGAATCAGCAAGAGATAAAAATCTGTGCATAAAGTAGAAAATTGCATAGATTATTTAAAATGGTTAATGCCACAAGTCTCTGTAGTAAGGGACAGCTGTAGGACTCATTGCAATCAGTACGGTTTAAAAAATGTACTTAAAATAGTCTCATTTTAATCTGTTTTTTTCACTTACTGTTTTTTATTTAGATGCCTTTGTAAGTGTGTAGAGCACATGTACTATGTAACCCAGAAATTAACTGTATTTTTATTTGATACGATGGTGTTTTTAAGCACCATGGTTTGTTCCTTCCTGAATGGATTGAGAGAGCAGGTTCGTATGGGTTGTAGCTAGTGTTGCTGAGTGACCAACCTAGTCACTCATTCCTTGTTTTTGGCTGCCCAAGTCTGGGTATCCATTCCTCTTGATGGAACAGGGGATAAATCCTGATTAGTTTCAACCAATAACGATAATCCCTTTCTCATAGCCAGTAATTGGTTTAGATTATTCGGAGGACCCCATGCTAGACAGGTAAAGAAAATATCTTGAGCAGGTTATTTCTGGAAAAGGTTTCTTCAGAGCTTCAAGGAATCATGCCAGGTGAAGTGGGATCCTGTTCAACGTTTCCTTATCTGGCTGTGTCTTTCAACGATGGTTATAATTTGTGCATGGCAGAGCAGAAAGACTGGAAGAACCTGGAACCTGGATGATGCTCTTGAGCTACTGAACCAGCCAGCCGTGTAGCCACTCTATCTCTGGACTGTTTCTTTTGTGAAAAACTGAATTGTAGATTGATTTAGGTTGCTTCTAGTGATAACTAAAGATATAGAGCAATTGAGAAGTGGGCTTTAGGCAAATCACTTTTTTTGAGGTGTTGATACAGAGATGATCTTATTTTCTGTAAATTTTGGTGTAAATATTACTCAAATATTTGAGTATTAGAAAACTTGAAACAATTCAATGTGTATGTTTTCCTCTATTTTTACATTACTGACCTAAGAACTTTTGGAGCCTGATATGATGTTAGGTATATCTTTCTTTCCATAATGCATGACATAAATTTTGTTTAGGTTAATTTGTTATTCATGGGTCATTGCTACCGTGTTGTTGATGATATATGGCGTAAGGTAAGGACTCACTTCTGTTTCTTTTCCAGTGATTAGCCTGATAGCCTGTATCATTTGAGTCATCCACCCCTTTCTGCAGAGATGAGATGCTGTTTCTCACGTGTTTCTGTCACTCATGGCTCCTGTTTTTCTTGCTCATCACTTTTCCATCAGATTTGTCTAGATGATCTTGAGTCTGCTGTATAACAGGTACTAAGATTCTGGTACAGTGTATAGTTTTATGTAGGAACTATATATTCATAGTATACTTGTTGAAGGTTTCCCACACTAATGGGAAGTAGCTTAAGTATTCGGTATGCATTTTAAGTAAAATATTTGGAAAGGTTATAAATGATTTACCATGTTCTTTTTCTGTTACGAAGTGCCTGATACCAAAGGGCCCTATACATGTGTATGTGGCCCTCAACTGCCTCTTCAGTAATACGGTTGTAGAATTTCTCTATTGTTTCAGAGACACCAGTGTTTTCATACTATTACATCTCTGAAATAGTGTAACACAGTCTAATTTAACTGGTGTTTTTTCTTCCTTAGAGGTACTTAAAGTAATGGTTTGTCTTATATTTGATGGATGAAATGCAATATTTGAAAAGTTTTTAACTATTCCTGGCAAGACCTGCATTCACAAAAGAAGGCACCATGGGAGATGGCCCACTCACCCATCCAGCAGCAAGGAGTGAATGTGGAATTGTGGCAGAGCACAAATGCTTGCTCTTTATATGCACAGTGACTTCATCCTGTGGAGCGTGAGCAGATTAGGAACTCCCAGTGGATTCCAGGGGCTAAGCCAGGGGTTGACCCCTCCCAGCACGTACAGTGACTGGTAATGTTTCTATCCTGGTGACTGGTAATGTTTGTATCCTGCAGAAGTGTGTAAAATGATACTGACCTGGACATACCTTTTAAATTTAATGCTGTATCGTGCAGTAGTCCCTGTGTTTATAAACCCCTGAGAAGTTCTATACACAAGAGAATGTGTATACAGGGAGTTTCACCACAGCAAGATTTTGAGGTATCCTAGGTGACCATCACTAGAAGAGGTGGGTAAAAGGTGGATCATGCATTGGGGTGGTGTCTAGCAGTCAGAGTGTGTGTTGTACTTGCATGTAGCACATCCAATTAGCAGTTTTAGATATGAATGGAAAAAATGGATGGAATGAGATGTCATACAAGTAAACAATGCTTATATCAGTTAAAGTTACACACAAACCCTTACAGAAGTTACAATGGTGAGTGCTAAAGGTCCTACCTTTATCAGTGAGTGCCTGTGAGGGAAGGGATGGAACTGGGGTTTGGCATGAAGAAAGAATGGGGTCTACACAGAAACCAACACTGATATGTTTTGAGCTGAGTAGTACAGTTAACATTGTGCCCAGGACTTCTCCAGAAATACTGAAGACATACACACAGGAAAATTAAAGACCCACACTTAAAATCCTCAATAATGTTTTATTCTGTTCAGTTTTAGCCAGAATTTTATGGCTCAGTTGCCTAAATGATACCTGTGCCTTTTCTGGCAGAGCTGCTCAGCCAACATCCCCCCACACCTCAGGTCAGCAGCCAGTGGGTGACAACTGGTGCTCCAGGTACAGGCTTCTGGGGCAGGCAAGAATCAGACTTCATTCCCATAGGACTGGGCTGTGCATCTCACCTATTGGCCACTGTCTGTAAGAAGGGAGCAGGGCTTACCTTTGTTGTCTCCTGGGCTCAGAGCAGTCTTCCCAGAGGGCTGGTGCCAAAGGCATTTAAAGGCACAAGTACTGGGTGCAGCAACCTGGGGCAGGATAACAGTCAAGGTGAGCAGCAGACATACTGAGAAGCCGGGGAAGGAAGAGGTTGGGAAGCTGACGTGTGTGGGGATAAGAGCTTTTAAAAGCTTCCATGTGCACACTGTATGTGTGCAGGGTGGGACATGACTCAGAAAAGATGTGGAAAGTCCCTATGCACTCACCTAGCAACTCTGTAAGCTGGAAGTGAAGACTAAGGCAGAGTGGAACCAGCCTGGTCAAGCACTAAAGACATACCCAACACAGAGCCAGCCTGCAAAACTAGGGGAGTGCCGTCACATTGCCTCATGTTTGACTCACATTTGACCTCTGACACATTCCCATTGATTAGTGCTTCCTTCGTTTTTGACCAAGGAGGCCCAGGCTCACCTTGTACACACTGGGTGTGACCTAGACTCAGCTCTTTCTCCAAGGAGTCCTGGTTCTTCGTAGGGGCCAATGTTGGGAACTGACTTTGCTCACCACTCTGGGAGGTGTTACTCAGTGGACAAAGCTATGAAATAAGTAATTTTTTAAATGAATAATATTTTTTGATTCATATTTATCATCATAGGGAGGTCACATGAATTCTTTGATTTCTATGGTTGTCTTATCTCTTAAACTGGAAGTTTTGATTCCTAGTAACTTTTATAATTTCTTTTAGCTTTCTCCTACAATGTACACAAAATAGATTCAAATAAACAGCAATATTATCAGGAAGAAAACTGATGAGTGATTTTATAATTTTTGGCTGTCATTTTTGTTCTCAAACATGTTCCATTAAGGATGTATAATCATAACATAGAGTGCAGAGTTTCTTCAAAGAATCACTTCTTTTGTGTGGTCAAGTTGCCAATTTGATACTAAGTTGATTTCAATTTTAGAATCTTTTTACTTTTGAATATGTAAACCACT TCONS_00145563 r 3' 77 TCONS_00147356 s 3' 174 EMBV3_35717 TGAAGTCTGTTCGGGAACTCATCTTGAAACGTGGGCTCACCAGGCTATCGAGGTGAACGC Variant GeneID:522029|RPL7L1:XM_002697242:430_cdna 483^700 5 EMBV3_41467 GeneID:522029 23 GENE RPL7L1 NULL ribosomal protein L7-like 1 EMBV3_04904 TGGCGGATAGCCCTGCTGTGAATGGAGCCACTGGTTCCTGACGGGCATGACTGTGGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14195 TTCTTTACAGACTGACCATGCGGAGGGAGGCTGGAACCTTTCACCACAGGAACTGATTCC Gene GeneID:511956|MAEA:NM_001034415:51_cdna Constitutive 1 NULL GeneID:511956 6 GENE MAEA MGC128694 macrophage erythroblast attacher EMBV3_05811 CCCTGGAAGTTTGTCACTTTCCTGTGTTCCTGAACTATGAAACTATGACTATCTGGGGTG Gene GeneID:614700|MGC148714:XM_002692789:71_cdna Constitutive 2 NULL GeneID:614700 14 GENE MGC148714 NULL similar to Cytochrome c oxidase polypeptide VIc-2 EMBV3_33192 CATCGCGGGCCTTGTGAAGATTGTGAAGGAGGCTTACCCAGACCACACACAGTTTGAGAA Gene GeneID:616441|THYN1:NM_001076422:24_cdna Constitutive 0 NULL GeneID:616441 15 GENE THYN1 MGC142537 thymocyte nuclear protein 1 EMBV3_05871 ATTTGGGTATACCACATCTGGTTTTGGTTGGGGGGTGGGTTGGTCTTTTGAAAACTGGAT Gene GeneID:512635|TTC14:NM_001101960:19_cdna UTR3_Alt 3 NULL GeneID:512635 1 GENE TTC14 MGC143168 tetratricopeptide repeat domain 14 EMBV3_08367 ACTCATAGACTTGTTGCGGGTGGGAGTACAATGGATATCCCTAGCTGTGGTAAGGACACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24288 ATGCTACATCCCACTTGTGGCAGAATAAGTGCCAGGGACAAAACCAGGAAACTGGGAGGC Gene BVV0102_068490 - 1 EMBV3_16823 GK000015.2:34791668-34848616 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061056 TCONS_00061055 TCONS_00061057 1 XLOC_036912 Coding TCONS_00061055 XLOC_036912 Coding Coding ZNF202 15:34846954-34851628 j TSS45544 2932 1 TCONS_00061055_4 275 4 0.373421784720736 1.22467849468878e-14 2.82198730010677e-10 1.42993751227006e-09 1.63943688755405e-05 8.96342245741258e-05 6.8151136456146e-18 3.35442952204557e-05 3.09135451631982e-64 1.10660345401804e-60 0 0 0 7.13106046384807e-06 2.88746161187664e-16 5.75683555194056e-12 0.000687316858197471 0 8.01005348956645e-10 3.83534426041391e-06 6.87223118508074e-63 0 0.000317817633506875 0.000104461681578844 0.000943438657297051 5.5560475013953e-05 6.699300261234e-05 5.96722730304071e-08 3.85629430554245e-05 7.5659157988886e-08 1.76937723692006e-10 XM_002693090.3 ZNF202 PREDICTED: Bos taurus zinc finger protein 202 (ZNF202), transcript 0.0 4711 100.00 0.890518417462483 NM_003455.2 ZNF202 Homo sapiens zinc finger protein 202 (ZNF202), mRNA. 0.0 1974 75.18 0.977148703956344 TCONS_00061055_4 sp|O95125|ZN202_HUMAN ZN202_HUMAN Zinc finger protein 202; 0.0 529 89.82 0.996363636363636 6 coding 0 0 0 0 -0.0185820164445021 0.891699990880417 -0.0114109752095856 0.804325515672591 ATGGCATTCAAGAAGAGCTCACCAGGGCTTGGTCGCTTTCAAGGATGTGGCCGTATGCTTCTCCCAGGACCAGTGGAGCGATCTGGATCCAACCCAGAAAGAGTTCTATGGGGAATACGTCTTGGAAGACGACTGTGGAATCGTGGTCTCCCTGTCCTTTCCAATCCCCAGACTAGACGAGATCTCCCATGTCAGAGAAGAAGAGCCTCTGGTCCCAGACGTCCCAGAGCCTCAGGAGCCTGAAGAGCCAGAAATTCTGAGTTTTACCTATACAGGAGACGGGAGTGACGACGAAGAAGAGTGTCCTGGGCAAGAAGATCTGAGTTTGGAGGATCCACACAGGTCTGTGTCAGGAGATACAGAAATTCACCAAACTCCAGACTGGGAAATAGTCTTTGAGGATGATCCCGGTAGACTTAATGAAAGAAGATTAGGCACAAAGATGTCTCAAGTCAGTAGTTCAACGAACCTTCAGGAAACCATGCCCGTCCACCTGCTGTTAGGGAGACATCATAACTGTCCTGTGTGTGGAAAGAGTTTCACTTGTAACTCCCACCTCATTCGACACCTGAGAACTCACACGGGAGAGAAGCCCTATAAATGCATGGAGTGTGGGAAGAGCTACACACGGAGCTCCCATCTCGCCAGGCACCAAAAGGTACACAGGACCAACGCTCCTCACAAATACCCGCTAAACCGGAGGAGTCTGGGTGAGGCCGCCCCTCTGGTCCAGGCGGAGAGAACCCCACCCGTGGAGAAGCCCTATAGGTGTGAGGACTGCGGGAAGCACTTCCGCTGGACTTCCGACCTCGTCAGGCACCAGAGGACGCACACGGGCGAGAAGCCCTTCTTCTGTACCATCTGTGGCAAAAGCTTCAGCCAGAAATCCGTGCTCACCACCCACCAAAGAATCCACCTCGGAGGCAAGCCCTACCTGTGCGGGGAATGCGGCGAGGACTTCAGCGACCACAGGAGGTACCTGGCCCACCGGAAGACACACGCGGCCGAGGAGCTGTACCTGTGCAGCGAGTGCGGGCGCTGCTTCAGCCACAGCGCCGCCTTCGCCAAGCACCTGCGGGGACACGCCTCAGTGAGGCCCTGCCGCTGCAGCGAGTGTGGGAAGAGCTTCAGCCGGAGGGACCACCTCATCAGGCACCAGCGGACACACACAGGCGAAAAGCCGTTCACGTGCCCCACATGCGGAAAGAGCTTCAGCAGAGGCTACCACTTAATCAGGCACCAGAGGACCCATTCACAAAAGGCCTCCTAGCCAGGGCCGCACGCAGGGACACCTGCCTTCAGCCCTCTCCTGGGGACAGACTGGGAGAGGCCCTCTTGTCGGCTAGAGGCGACCTCGTCTAGGGCATCTGCCTGACCTGCCCAAGTCTGATGACACCTTCCCGCAGCTAAATTAGCTCCTGGCAGGACCTCTCAGCCTTCCTCCACACCGTGAGGAGATGTTCTTCCCAAAGTTTGCCTGAAATGAGGCCTCTCCTTGGCTAAAATGCTCCCGCCTCCACCGGGCAGGTGTGAAGCAGGGGGAGTGAAGACACAAGAGGTTGGGCTTATTATACTTGCCCCCATCCTGAAGACAACAGTCTCAGCTTTGAAGTGGCCCAGGACCAATCCTCAGGGTTGGTGAGGGACCAGCCTTTACGATGCCGTCCTCCCTGGGCTCTAACATTAAAGCACACAGCCCTGAAGTCAGGGCAGGAGAACCGCGCCTGACCCCATAGATTACCTGTAAAAACCTCTCACTGGTTCACTTCCTCACCATGCACTTTCCTTTAACTCTGGGGAGAGGTGTGAGTAGCATTTGATGGGCAGAAACATGAAGGTGGCTTCATGTAGACCTCGTCAGGCTGCTCTCCTCTCCAAGGTTAAAATGACACCAGGTGCTAGACACTGCCTGAAAGGGGGGCCCAGGCAGCAGCCTCTTTCCTCGTGGGTTTCTCCTGTGAGAAGGCTTGTGCCTGGGCCTCCCAGTTTCCTGGTTTTGTCCCTGGCACTTATTCTGCCACAAGTGGGATGTAGCATTTGGGTACTGAGGGATTCAGTAAAGCCTGATTAAAATCATGGTGAAATCATTTACATTTCCACGTATATACAAGCCCACCCACCCTATCCTCATCACATGGGTTTGTGAGGGGATTTTTGAAATGGTATCAGCTGACAGAGGCACTCTTAACGATTGTAGAATCATGGTGGACGGGCTCACTTTATTTACATGAAGGAAACTGGAGAAGATCTAAGCTCAAATTACGGGAAAATTAAGAAAGAGCTGTTGCTGCTGACCAAGGCCATCCAGACTATTCTGACTCCCCACCCTCATCCTCCCTCCCTCACCCTCTGACATTAGGGAGACCTGGGACCCTGAAGAATTTACCAGGAGTAAATGGCTTTCATGTCTGCATTGTTGGCTTTTTCTTACATGATTTCATTTTCATGTAAGAACTAAAGCGTAGGATCTCATGGCCCAGGGGTCTCTGTTGTCTGGTAGAGGTTCTGTGGAGCTGAGGCTGAATAGTTATGAACCTCATCTGCTCTGACTGAGCATGGCCAGGACTGGGGAGACCATTCCCTCCGTCCATGGAGCACAGGGTATGGGATTAAAGCATGAAAAGGGAGACTGTCTTCTGTGCCTGGTTTCTTCTGCTCTGTTTATTGAGCTCTTGTGTGCCAGTGTTCACCCGGAGAGCATGGGTAGTGAGATGACAGAGCCTCAAGCTCAAGAGCTCAGCAAAGGGGATTCTCGTTCTAGTCAGTGATGGTGTTCCAGCTGACTGGCTTTAACTCCGGTTGACCGTTGTCCTCCTAGAAGCATGCACATATGAAATTTCTAAAAAGGAGCACTGACAGCCAAGATCCCTGGTTTCTAGGGCTTTCCACCCATACCAGTCTTCAGGACTTCATGTTCCCAAGACTTCTGAAG EMBV3_36802 GTCAAGGGATACTATGACAACCCCAAAGTCTGTGCACTCTACATCATGGCTGGGACAGTG Gene GeneID:515309|MLEC:NM_001098983:162_cdna Constitutive 0 NULL GeneID:515309 17 GENE MLEC MGC165724 malectin EMBV3_39747 TGAGCGAGATGGACTGAAAGAAAAGGTTTACCAGATGCTCCAAAAGTGGCTGATGCGGGC Gene GeneID:504727|RIPK1:NM_001035012:190_cdna Constitutive 0 NULL GeneID:504727 23 GENE RIPK1 MGC127532 receptor (TNFRSF)-interacting serine-threonine kinase 1 EMBV3_39736 TGCAGAAAAGAAGTCCCAAGAAAATAAAGGGACCGTGGTGAGGAGGTGCACGGCCCTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33934 CCAGAGCCATAGGGATGTGTGGAGGGTGAATTAGAATGCCCCAGTTAATCAGAAGTTGGG Gene BVT0102_129453 + 1 EMBV3_05550 GK000015.2:53404314-53492849 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065045 1 XLOC_039769 NonCoding TCONS_00065045 XLOC_039769 NonCoding NonCoding - 15:53405257-53406506 - TSS48788 1249 1 TCONS_00065045_1 60 0.11609287429944 1 0 0 0 0.00116323209725193 0 0 2.8639372393665e-06 9.33820613746732e-06 0.000430936014928932 1.26343314537517e-05 0 1.83281351642518e-06 0 2.29726503250794e-06 0 0.000769910050057416 0.00031719285568541 0 0 0.000287067739605778 0 6.56242209969796e-05 0 0 0 0.000604646852412137 5.64088014947694e-06 0 1.53805624156782e-05 0 0 XM_005216213.1 LOC101905537 PREDICTED: Bos taurus RNA exonuclease 1 homolog (LOC101905537), 0.0 2069 99.65 0.925540432345877 0 noncoding 0 0 0 0 -0.076058790147492 0.519759412488524 -0.010966078998147 0.902962341900547 CAGTGTGGCGGGAGGGGGGTCAGGCAGTACGCCTAGTTGTTTGAGGGAGTAGCAGAGTGCCTTTTTTGCTTCATGGTCCTCCAACACCCCTACCCTCTCGTGCAGATGAGCCTGGCGGTCCAAGGCACCTAGGAGCGAGCGCGGAGAAATCCTTTCGCAGCGGCGCTGAATGCCTGGCTTGGGTGAGGGCGAGGGCGACTAGTTGCCCTGCAAAGGAAAAATCGGTCGTCTGCTACAGGGCGTCCAAGTCAAAGAGCATGAGGTCGTTAAGGCCAGGACCCACCCCATCCCGCATTTCACAGATGGAAGGCCAGAGGAGTGGAGACTTCATGAAGGTTACACAGCAGTGCTAGAATCTCTGGGTAACGGAGTGTTCTTGAGGGTACAGAGAAACAGGTGCAGATGATAATCAAGAGGAAAAGTAAAGGAGGCTCCAGGGGCAGTGGAGGAAGCTCTTGAATGAGAGTCAGGACCTCTAGGTGCCATCCCACTCTGGGTGCCAGTCCACTCTGCCTGCGCCTAGCTATTTGGGTGAGCTCAAGCTTCCTCATCTCCCAACGAGGATGCTCTGGTCTGCTTCCCGGACTCCGTCTTCCTCCTCTATCCAGACCATCTGGGTGTAGGGATATCAGCCTCCCTTGAAGTCCTTAGAAAAATGAAAAACACCTCTTCCAGAGCCATAGGGATGTGTGGAGGGTGAATTAGAATGCCCCAGTTAATCAGAAGTTGGGGTCTCAAACACCTGTTCTCAGAAGCGGGGTCAGGCAAAAGAGGAAAGTGAGTGAAGCCTGGAGAGACCCAAGTAACTTGACCAAATCCTCTTGGCCAGCTATTAGGACGATGGAACAACCTAGATTGTTTACATTGTTAGCCTAGATTCTTGAATAGGAAGTTGATAGAATCAGAGCTATGCTTGAGGCAGATTAACCTGTATAGGAATTGGAAGACTAGGCTTGCTATTTCTGGTTTCCTTGAGGCCACTCAAAGTGAACCCTTTATCAGAGTCCTCAATTAGTATCTGGGAAAGCCTGGGGCAAGGGAACAAGTGGGTGGAGGCCCAGCTCCCTGACCTCTGTGGGGCTGGCAGCTAGTGCCTAGGGTGGAGGTAGCCAGGCTGGGCTCAGTTCTACCAGCAGTTCATTGTGAGGCCTTGACCTAATCAGTTCATCTCTTTCAACCTATATTTCCTCACCTGTAAAATGGGCATCTAAAACCAGCCTCACAGGCTCGTTATATTAAATAAAATTTC TCONS_00061754 TCONS_00061758 TCONS_00061759 TCONS_00061761 TCONS_00061763 TCONS_00061764 . 5' 186 TCONS_00061754 TCONS_00061758 TCONS_00061759 TCONS_00061761 TCONS_00061763 TCONS_00061764 . 5' 186 EMBV3_23873 TACGAGAGAAAAGACACAAGTCAATTTTGGGTAGCATGTTCCTGTCTCGGACCTCCTCCC Gene GeneID:534506|LOC534506:XR_084088:145_cdna Constitutive 0 NULL GeneID:534506 26 PSEUDO LOC534506 NULL similar to KIAA0598 protein EMBV3_29782 TGAAAATTGGAGGCGTTTCTCTGACCAGTTTCCGCTTCCCTTAAAAGAGCGTCTTGCAGC Gene GeneID:767620|TNPO1:NM_001076540:1_cdna Constitutive 0 NULL GeneID:767620 20 GENE TNPO1 KPNB2 MGC127455 TRN transportin 1 EMBV3_25832 AGGCCCTCAAACTCAGCTTCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGC Gene GeneID:508942|LIMD2:NM_001040512:224_cdna Constitutive 0 NULL GeneID:508942 19 GENE LIMD2 MGC10986 LIM domain containing 2 EMBV3_33688 TCCACCACTCCCAGATATATTCTTAGACAGGTATATGGCAGTGTATGGGAGAAATTACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07054 TGGGTCTTGGGCTCCTGCTTAACCTCTATGAGTAGAACCCAGACTGCCACGGTTATGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35853 GTACAAAGTTGTGTGACAGGGCATAGTCTTTGCTTCCAGGATTGGGATAGGGGCACTAGG Gene GeneID:509965|CMPK1:NM_001046044:116_cdna UTR3_Alt 2 NULL GeneID:509965 3 GENE CMPK1 CMPK MGC137127 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic EMBV3_05774 GAGCTCACAAGGCACTACAGGAAACACACAGGTGCAAAGCCCTTTAAATGCAACCACTGC Gene GeneID:537747|KLF7:XM_002685537:121_cdna Constitutive 0 NULL GeneID:537747 2 GENE KLF7 NULL Kruppel-like factor 7 (ubiquitous) EMBV3_24834 GAACCGCTCTCTCAGTGCTGTGGTCAGTTTTCCAATCATCACTGCCGGTCCAGGATTTAT Gene GeneID:514175|TMEM144:NM_001101989:60_cdna UTR3_Alt 3 NULL GeneID:514175 17 GENE TMEM144 MGC165857 transmembrane protein 144 EMBV3_34051 GAGCTCATTGGGCTTACTTACCTGCTGGACTCACTTCACACTGAATGTTTCCTGTGTCTG Gene BVT0102_114536 + 1 EMBV3_35474 GJ058531.1:1-7665 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36691 AGACCATCCAAAAACTTAACACCTCTGCTGGTAGCCCTGCACTTCATTTCAGCCTCAATA Gene GeneID:522319|LOC522319:XM_002693971:188_cdna Constitutive 2 NULL GeneID:522319 16 GENE LOC522319 NULL hypothetical LOC522319 EMBV3_26976 AGGATGAGGCAGCCAAAGCGGAAGAGCAAGTGGCTGAGGAGACCAAGAGTGGGGGAGATT Gene GeneID:281494|SNCG:NM_174186:2_cdna Constitutive 0 NULL GeneID:281494 28 GENE SNCG NULL synuclein, gamma (breast cancer-specific protein 1) EMBV3_30990 TCAGGAGCTGCTGGAGGCTTTCTGCAACCGCGGCCCTGTGATCAAGAGAAAGCATGACAT Gene GeneID:509115|MRPS7:NM_001034343:368_cdna Constitutive 1 NULL GeneID:509115 19 GENE MRPS7 MGC127881 mitochondrial ribosomal protein S7 EMBV3_08386 CAGTCTCCAAACCAGAAAGTCAACTAAGTGTATTTTTGAAGATCCTCGTGTACTACCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34024 AACCGGGGCTGCCGCGGGGAAGAACTACTGGCCCGCACCATCCGCGAATTTGATGAGCGC Variant GeneID:510774|ABHD1:NM_001035094:102_cdna 535^870 2 EMBV3_37904 GeneID:510774 11 GENE ABHD1 MGC127615 abhydrolase domain containing 1 EMBV3_28163 GACTGGCTTGAGATCACGTTGCTCTGGCTTTTCTTCATTGTGCTGATGTACGTGACAGTG Gene GeneID:100295411|LOC100295411:XM_002699920:37_cdna Constitutive 0 NULL GeneID:100295411 X GENE LOC100295411 NULL hypothetical protein LOC100295411 EMBV3_29540 AACTTATGAGAACCTCCTGTTTATCACCGGGAACTCTATTCAGCGATCTGTGGTGACCTC Gene BVV0102_265555 + 0 NULL GK000019.2:52263264-52290597 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100753 1 XLOC_060995 NonCoding TCONS_00100753 XLOC_060995 NonCoding NonCoding - 19:52274186-52275077 - TSS75129 891 2 TCONS_00100753_2 55 0.516273849607183 1 0 0 0 0 0 0 3.08819354783721e-07 0 0 0 0 0 0 0 0 0 0 0 0.00249219474734251 0 0 0 0 0 0 0 0 0 0 0 0 XR_226279.1 LOC101906072 PREDICTED: Bos taurus uncharacterized LOC101906072 (LOC101906072), 1e-43 181 80.56 0.236812570145903 0 noncoding GGGGTTGCAAAGAGTCAGACACGACTGAGCGACTGAATGATTTTTACTTTTTATGTTCTTAAAACAATTTTTTTTGGAGTTAGTGGCCTTACAACATTGTGTTACTTTGTTATGGTTTTGTCACTCAGTTACAGCCTACTCTTCCGCAGCCTCCAGGGACTGACGCCTGACAGGCTCCTCTGTCCATGGGATTTCCCCAGATAAGAATCCTGGAGTGGGCTGCCATTTCCTTGACCAGAGGATCTTTCCGACCCAGGGATGGGACCCATGTCTCCTGCCTTGCAGGCGGATTCTTTACCACTGAGCCACCTGGAAAGCTTCTGTACAGCAAAGTGAATTAGTTGTATGCACACATATACCCACTGTTTTTAGATTTCCTTCCCACTGAGGTCACCACAGATCGCTGAATAGAGTTCCCTGTGATAAACAGGAGGTTCTCATAAGTTATCTAGATTATATAAAGTAGTATATATATTGGCATCATTTTTAAAAGGAACCAGGCTTTTGAAGAATTTCAGCAGCTTTACCTCAGAACTCCGTCAGGGGTGAGCCTGGGAGGGGCTCCCCCCAGTCAGCTGTGTCTTCCAACCGGGCCGAGTTCCAGAAGCTGCAAGCCCCACCAAAACTACTTCTATGAGTTGAGCAATTCCTGCATGCCTTTAAGATGAAACCCGCGGTGTGATGAGGGTAGAGCGTGGATTGAGGGCTCCTGAGCAGACCCGTATCAGAGAGGTCTGTAAGAAGGCCCTATAGCCCCCACCCTTGGCCATGTGGAGTGAGTGGAAGTCCTGACAGGCTGCCTGCAGATGCCTTGGGTGGGAGCCCAGACCGTCCACGATCCTGGCAGGACTGTGATGCCAGGTGGTGGCCTAGAGCCAGGGAGTCAGGCCC TCONS_00097693 . 5' 10865 TCONS_00097693 . 5' 10865 EMBV3_28648 TGGAGCACCGCTCTCCCTTCACAAAAAGATGGTGGCACGGCAACAACCAAAAGACCCAAT Gene GeneID:768066|C16H1orf49:NM_001077123:234_cdna Constitutive 1 NULL GeneID:768066 16 GENE C16H1orf49 C1orf49 MGC133837 chromosome 1 open reading frame 49 ortholog EMBV3_06561 TCAGGAAATAGGGGAGATTCAAGTCATACAAATTCCTACACGCTGAACTTTCCAGGATGC Gene GeneID:767940|RBBP4:NM_001077013:202_cdna Constitutive 0 NULL GeneID:767940 2 GENE RBBP4 MGC128413 retinoblastoma binding protein 4 EMBV3_26096 TAAGTGTGCTGTATGTGGCCGTGGTTTTACTGAAAAGAGACAACTTGGATCTCATTGGAG Gene GeneID:787812|LOC787812:XM_002695299:139_cdna Constitutive 0 NULL GeneID:787812 18 GENE LOC787812 NULL hypothetical LOC787812 EMBV3_19141 TCTCTATTACTTCGGGAGGATCTCTTAGGTTCTCTCAGCCTCTGGACCCACCCTGACTGT Gene GeneID:516646|MRGPRX2:XM_002699084:61_cdna Constitutive 0 NULL GeneID:516646 29 GENE MRGPRX2 NULL MAS-related GPR, member X2 EMBV3_33533 CTCGGGAGACAGCGGCAGCCCCAGGCCCAGAAGAACAAGCTCTTGGAGCCATCCGAACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13941 GTCAGATTCTTTCCAGTAAAACTCTTACCATAGGGAAACAGATCTCACCTCAGCGTTCCT Gene GeneID:539357|VPS4B:NM_001076156:164_cdna Constitutive 2 NULL GeneID:539357 24 GENE VPS4B MGC139102 vacuolar protein sorting 4 homolog B (S. cerevisiae) EMBV3_12418 CTGGACTTCTCTCAATGGTACTATCCTCAACCCTTATTATCTTGGCTTGCTGGGGGGCAG Gene GeneID:512072|PTPRF:NM_001101079:134_cdna Constitutive 0 NULL GeneID:512072 3 GENE PTPRF NULL protein tyrosine phosphatase, receptor type, F EMBV3_35129 AATCCCAGTGTATTCGCGTGATTCAACAGCAACCTTTCTTCTTGGGGGCTCGTCCGGGAT Gene BVV0102_093124 + 0 NULL GK000008.2:77396747-77421387 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00055559 TCONS_00107436 TCONS_00118040 TCONS_00210913 TCONS_00174805 TCONS_00171428 TCONS_00174806 TCONS_00232824 TCONS_00125692 TCONS_00145751 TCONS_00250203 TCONS_00160140 TCONS_00001867 TCONS_00001866 TCONS_00174809 TCONS_00174808 TCONS_00251721 TCONS_00001865 TCONS_00132066 TCONS_00174807 14 XLOC_033367 XLOC_063346 XLOC_072206 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_142307 XLOC_077234 XLOC_088920 XLOC_153146 XLOC_097593 XLOC_000454 XLOC_154662 XLOC_080699 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_33568 GAGAATAATAAGCAGAGAGACAAAACAGCACTTAAGGATGGGACTCTAATAGGCTGTTTG Gene GeneID:522186|YIPF7:NM_001103258:17_cdna Constitutive 2 NULL GeneID:522186 6 GENE YIPF7 MGC155290 Yip1 domain family, member 7 EMBV3_36016 TTTTTGTCTATGATGAGATCCGGAAACTTGGAGTTCGCTGTTGCCCAGGAAGCTGGTGGG Gene GeneID:521163|ATP4A:NM_001144089:637_cdna Constitutive 0 NULL GeneID:521163 18 GENE ATP4A NULL ATPase, H+/K+ exchanging, alpha polypeptide EMBV3_20612 CTTGGGGTGACAAGTGAAGCCCCTATTAAAGTTCTCCTATTGGCGGAGCTGCCTGAGCTA Gene BVV0102_173741 + 0 NULL GK000007.2:9001317-9020329 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13314 CTAACTGATAGAGGGAGAGACCGAGAGTGTGAGGACTTGCCGAAAACCAAAATGAGGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16309 GACCCTTGAGCAAGTTTCAGAGGAGGGTAGGAGGCTCACAGTCAAAAATCAGTATATAAC Gene BVV0101_043996 - 1 EMBV3_09041 GK000017.2:56543399-56573544 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06797 GGCAGGCCTCCTTGAATAGGATCTCTGTGTTAGGGGTAGGTGGGTGAGGAGCAGATTTTT Gene GeneID:513497|CDKN1A:NM_001098958:29_cdna Constitutive 0 NULL GeneID:513497 23 GENE CDKN1A CIP1 SDI1 WAF1 p21 cyclin-dependent kinase inhibitor 1A (p21, Cip1) EMBV3_31246 AAGATGCATTCGGCAAGTTATATGGGAAGGGTCACAGAGCTTCCATGGTCTCTGGTCACG Gene BVT0102_244340 + 1 EMBV3_22945 GK000012.2:21463535-21488035 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038735 1 XLOC_022556 NonCoding TCONS_00038735 XLOC_022556 NonCoding NonCoding - 12:21472074-21473729 - TSS28236 1655 2 TCONS_00038735_2 92 0.880966767371601 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000319173020918393 0.000401264180602435 0 0 0 0 0 0.000227272415500966 0 0 0 0 0 0 0 NM_001110063.1 MITD1 Bos taurus MIT, microtubule interacting and transport, domain containing 1 (MITD1), mRNA. 6e-57 226 88.04 0.109969788519637 0 noncoding TTCTCCAATACGTGAAAGTGAAGTCGCTCAGTCGTTTCTGACCCTCAGCAACCCCATGGACTGCAGCCTTCCAGGTTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTAGAGTGGGGTGCCATTGCTTTCTCAAAGATGTCCTAGCCCCAAATAATCTCCCCTTTTTTGTGCTGATACCTTCACTGCCCACCCGTCCACCTGTAAGAGCCTTCCATTTATTTGTCTGCTCCTTGGAGTGTGCTGCCAGTGCCGGGTGAGAGGCCGCCTAACCCTCGTGCTCCTGCTCAGCTGCAGCTGACTCTCTGCGACCCCATGGACTATAGTCGCGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCACACCCGAGTGTCTTGTGTCTCCTGCATGGGCAGGTGGGTTCTTTACCACTGCACCGCCTAGGAAGCCCAGTGCCAAGCAAGATGGACTTTAAAGCAGAGACTGTTATCAGAAACAAAGGGACCTTTTATAATGATAAAAGTCAATCTGCCAGAAAGATAGAAAAGTCATAAACATATGCTCTCTGATAACAGAATACAAATACAGATGAACCAAGAACTGACAGAAATGGAAAGAAAGATAATTCAACAGTATCAGCTGGATACTTCAATTCCACTGTTAATAACAGACAAAAAAACTAGGCAGAAGGTCAAGCAGAAAATATGTGATACTGTTGTCTTATAATAAGACATACGTATTTGGTCTCCATTCCCTTTCTGGCACAGAGGTCCTAAAACTCTTGGAATTTCCAGAGTGCTAGAAAAAATGATAAAGGTGTCTTTTGTCACAGCTAGAGAAGTGACTTCTAAAAGACCCAAGGATAGGGGCTGGTGGCCAGGGGAACCAAGAGGTGATTCCAGGGTTCAAACATTTAGTCCCACCGAACACTCTGGGGAGGATAGAGTGTCTGGAGATCAAGTTCAACCACTGACAGCCAATGATTTAATCATTCATGCCTCCATAACAACCCCAGAGGACTGGTTTTCTAGACTTTCCAGGCTGATGACCACGTGAAGACTTGGGGAGAATGGCGTGACCAGAGACCATGGAAGCTCTGTGGCCCTTCCCATATAACTTGCCGAATGCATCTTTGTCTTCCTGCAGTTCCTGAGTTGTACCCTTTTGTAACACACCGCTAATCTAGTAGATAAATGTGTCTGAGCTGTGGGCCCCCTTAGCAAATGAAACCCAAAGAAGCACAGGTGACAACCTGGACTTGTGACTGGTGTCTGAAGCGGAAGGACAAAGGGGCCCGTCTTGCAGGACTGAGTCCTTAACCCATGGCAGCTGATGCTCTCTCCAGATACACACTATCACAAATGCATTAAATTGTAGGACACCCACTGGTGCCCGAGAATTGTTTGGTGTAGGAGGAAAAAAACACACACTGAAATTGGTATCAGACTCACAAGAGAGAAAATATGAACAACTAACATATCTACAGAACCCTCCTCCCAACAACTGTATAATATTCATTCTTTTCAGGTACACATGAGCGTTCTCTAGGCTTCACCACATGCTAGGCCATAAAACAAACCTCAGTTCACTTAAAATAACAGAAGCAACACAAAG TCONS_00036481 . 5' 8308 TCONS_00036481 . 5' 8308 EMBV3_36390 ATATATCCTTCCACCCCCCAGGTCCAGAGGAGAGTCACTTGTTCAACCCTATCCCATTAG Gene GeneID:781806|FNDC4:NM_001102324:261_cdna Constitutive 0 NULL GeneID:781806 11 GENE FNDC4 FRCP1 MGC148929 fibronectin type III domain containing 4 EMBV3_29886 AGAAGAAATAAGTCCTTGACCCTGCCGTGGGATGGCTCCTTTGTCAGGAGGTTGCAGAGA Gene GeneID:505238|RALB:NM_001097985:2_cdna Constitutive 0 NULL GeneID:505238 2 GENE RALB NULL v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein) EMBV3_18781 TGATCACCTCAGTAGGATGGAAGGAACAGACTGCAGGAGTAGAGTTCAGTGTTTGGAGTT Gene GeneID:509236|TAGAP:NM_001076823:2_cdna Constitutive 0 NULL GeneID:509236 9 GENE TAGAP MGC143167 T-cell activation GTPase activating protein EMBV3_31176 AAGGAGTAAGTGGCTTCAGGATGTTAAAGAAGAGACATACAGATCACTACAGCCTCACTG Gene GeneID:614619|LOC614619:XM_002684861:246_cdna Constitutive 0 NULL GeneID:614619 1 GENE LOC614619 NULL similar to histone H2B EMBV3_28103 GCAGGAACCCCTTTCAGGACAAGGCTGAAGCTGAACACCAGGAGAAGGCAAACAAACCCT Gene BVT0102_059957 + 0 NULL GK000029.2:51279443-51290782 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168172 1 XLOC_103007 NonCoding TCONS_00168172 XLOC_103007 NonCoding NonCoding - 29:51282869-51283290 - TSS126150 421 0.163895486935867 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.17911804901753e-05 0.00099552501282499 0 0 0 0 0 0 0 noncoding 0 0 0 0 TTCTCTGTCCTCTCAGGAGCCCCAGCAGGCCGAGCTGGGAGCACTCCATTTTACAGCCCGGGAAACAGGCTCCGCAGGCTAAATAGGTTCCCAGGACTTACAGAGCTAGTCAGGGTGTGTGGAAAGGTCGCCCTGAGCAACAGCAGGCTGGGCTGGGCTGGGCTTGGGCACCGCTGGGTGGGGTCTCAGTAGAACCCATGTAGTCCCCTAGCTAGGGCTGGGCCACCTTCTCCACGGGGTTGAGCCAGGGTTTGTTTGCCTTCTCCTGGTGTTCAGCTTCAGCCTTGTCCTGAAAGGGGTTCCTGCCCCCTGGGCCACCCGGGCAGCTCTTCGCTCTCACCATCTGGATCCGGTGCCGGGGCCCAACAGGCCCGGTGTCGCCTTTCTGCTTGAACAACATCAGGGCTGGGTTGCCCGTCAG TCONS_00165787 . 5' 3428 TCONS_00165787 . 5' 3428 EMBV3_16413 GGGTAAAATTGCTGTGGTTGGTTGCATTACATGACACACAAAACTGTCCTCTACCTCACG Gene BVT0102_039645 + 1 EMBV3_33869 GK000001.2:97802993-97823538 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004634 TCONS_00004638 TCONS_00004637 TCONS_00004635 TCONS_00004632 TCONS_00004636 TCONS_00004633 TCONS_00004639 1 XLOC_001078 Coding TCONS_00004639 XLOC_001078 Coding Coding SKIL 1:97819965-97846196 j TSS2312 7530 1 TCONS_00004639_5 684 0.0163346613545817 7 0.7131910026687 9.90418897927045e-06 8.70602115352298e-13 2.38826493643501e-07 2.79842802574925e-13 4.46581794670945e-11 0 1.85575515030829e-12 2.31084024116609e-10 1.13330244477542e-35 4.02523229303359e-05 6.17219573648042e-05 6.24280208108416e-08 1.05321519433307e-11 5.26972772480542e-10 1.03271392690156e-05 0.00116923863063154 0.000437981020834198 0.000247194789532274 3.30722933610378e-10 1.07252344115313e-05 4.9449248348374e-06 0.000179886721268224 0.00047750608781701 0.000660874012195536 7.24596889625856e-11 2.70931938671474e-10 3.49548476549422e-11 1.69285742073274e-07 7.22031057205396e-05 6.10933899179247e-05 XM_005201684.1 SKIL PREDICTED: Bos taurus SKI-like oncogene (SKIL), transcript variant 0.0 1.257e+04 100.00 0.925763612217795 NM_005414.4 SKIL Homo sapiens SKI-like oncogene (SKIL), transcript variant 1, mRNA. 0.0 4801 83.47 0.598406374501992 TCONS_00004639_5 sp|P12757|SKIL_HUMAN SKIL_HUMAN Ski-like protein; 0.0 1282 90.95 0.998538011695906 2 coding 0 0 1 0 -0.0361049321680902 0.81824315710862 0.00670310259258772 0.895244595906288 CTGGCTCAGTTCTCCTCTCCTCCCCTCCCCCCACTGCCGCCCTCGCTCTCCCCCGGGCGGCCGGAGACGGCGGCGGCGTCTGCGGGAAGCCGTGTGTCTCCGCAGTGACGTGGGCGGGCCGAGGGCTCGGTGACGTCAGAGGGCTGTGTGTAGCGATGTGTGTGGGGTTCGGAGCGGCGCCGGCACAGCCAAGGGGAGCGGGCGAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGCACAGATTAATTAAAAGAAGAATGAACAGTAATCCTTGAAGATAACTGGGCAGATTTTTCTTTAGGTTTCATTTTTAATACAGAAGTTCAAGTGGAGTCAGAGTCTCTTGTTACTAGTGTGAGGGTTTATTCAAGCCTTCATTTTGTTCACACAGACCAACAGATCATCATTTTTAGAGAAGATATCCACCCCTCCCCCCCCTTTTTTGGTATCCTTGGTGCCAAATACTAAATTTGGGTGCATAATTTTGACACAAGTGATTTTTGACACAAGCATAAACTTTTTGGGTGTTGTGCCTAAAACTAAACCAAACTGTTGCACTGAGCATGGACATCTTGAATTGAGAGAACTGGTAACTTGATTTTAGTACATATACCTGAACATTAAAAAAAACAAAAAGGTTTCCTTGGAGGTGTGCCTCTTAAAATTATTTTCTTTGTTATTAGACATAATTTTTTTTATAGCACTGGCAGTACTTATACTGAAGTATTAGCAGAACCAAAGTTGCAAAATCTATTGAGTAGTGTAGGGATCTCTCTATGGAAATTTAAATTTTCTTTGAGAATAAGTTACCATAAGTATTGGTATTCATCAATTCTCTCTCTTAAAATAAGCAACTAAATAATAATGCAAATTTCAGACTTACTTGTTTAACACAATAGTTTTTAGCAATGGAAAACCTACAGACGAATTTTTCCTTGGTTCAGAGCTTAAATAAAAAATTGAATGGGATGGAAGATGATGGCAGCCCTCCAGTGAAAAAGATGATGACAGACATTCATGCAAATGGAAAAATGATGATAAACAAGTTGCCAGCAGTAAAGAAGGAACACTTGGATGATTATGAAACACCAATGGAAACCGACGAAGAGCATGTCAAGAGGACCTGCGCCTCTGTGCCTGAACCTTTACATTTAAATCCCAGTTTGAAACATACTTTGGCACAATTCCATTTAAGTAGTCAGAGTTCTTTGGGTGGACCAGCAGCGTTTTCTGCTCGGTATTCCCAAGAAAGTATGTCACCTACGGTATTTCTGCCTCTTCCATCTCCTCAGATTCTTCCTGGTCCACTGCTCATCCCTTCTGATAGCTCCACAGAACTCACCCAGACTCTGTTGGAAGGGGAGTCTATTTCTTGTTTTCAGGTTGGAGGAGAAAAGAGACTCTGTTTGCCCCAAGTCCTAAATTCTGTTCTCCGAGAATTTTCACTCCAACAAATAAATACAGTGTGTGATGAATTGTACATCTATTGCTCAAGATGTACATCAGACCAGCTTCATATCTTAAAGGTCCTGGGAATACTTCCATTCAATGCCCCATCCTGTGGGCTGATCACATTAACCGATGCACAAAGACTATGTAACGCTTTATTGCGGCCGCGCACCTTTCCTCAAAATGGTAGTATACTACCTGCAAAAAACTCATTGGCCCAGCTGAAGGAAACTGGCAGTGCCTTTGAAGTGGAACATGAATGCTTGGGCAAATGTCAGGGTTTATTTGCACCCCAATTTTATGTTCAGCCAGATGCTCCATGTATTCAGTGTCTGGAGTGCTGTGGAATGTTTGCACCCCAGACGTTTGTGATGCATTCTCACAGATCACCGGACAAAAGGACTTGCCACTGGGGCTTTGAATCAGCCAAATGGCATTGCTATCTTCATGTGAACCAAAAATACTTGGGGACACCTGAAGAAAAGAAACTGAAGATAATTTTAGAAGAAATGAAGGAGAAATTTAGCATGAGGAATGGGAAGAGGACTCAATCCAAGATAGATACACCACCAGGAATGGAATTGCAGTCATGGTATCCAGTTATAAAACAGGAAGGTGATCATGTCTCTCAGACACATTCATTTTTACATCCCAGCTACTACTTATACATGTGTGATAAAGTGGTTGCACCAAACGTGTCACTTACTTCAGCTGTACCCCAGCCTAAAGAGGTCACAAAGACAGAGGCAAGCAAATCTATACCAAGACAGTCAGAGAAGCCTCACAGTAGTGGGAAACATCAAAAAATAGTGTCTTATCCAGATGTCTCACTGGAGGAACAGGAGAAAATGGATCTAAAAGCAAGTAAAGAATTATATAGCCACTTAGATCCATCAGTCTCGAATAATGCTACCAGCAAAAAGAAACCTGAGTCTACCACTTGCAGCTTAGCCAGAGACACAAGCAAGTCAGGAACTGACTGTGATGTTGCAGCTTCATCTCCACTTCTTGTCAAAGACGTCACTTGTGAGGACGATAAGGGAAAAATCATGGAAGAAGTAGTGAGAACTTATGTAAAACAACAGGAAAAATTGAACTCAATTTTACAGAAGAAGCAACAACTTCAGATGGAAGTTGAAATGTTGAGTAGTTCAAAAGCTATGAAGGAACTTACTGAAGAACAGCAGAATTTACAGAAAGAGCTTGAATCTTTGCAGAATGAACATGCTCAAAGAATGGAAGAATTTTATGTTGAACAGAAAGACTTAGAGAAAAAACTAGAGCAGGTAATGAAGCAAAAATGTACCTGTGACTCAAATTTAGAAAAAGATAAAGAGGCTGAATATGCAGCACAGCTGGCAGAACTGAGACAGAGACTGGACCATGCTGAGGCTGATAGGCAAGAGCTCCAAGACGAACTCAGACAGGAACGGGAGGCAAGACAGAAGTTAGAGATGATGATAAAAGAGCTAAAGCTGCAAATTTTGAAATCATCAAAGACTGCTAAAGAATAGAAACCTTCAAAGAAATCCATCTGTGTGTTCCCAACAGGGTTTATTTTTATTTGTTTACTTTGGTAAATGAATTCTGAACAATTTAGCTGCATGAAATAACTAGGCATTCTATCCATTTGTAGATCAGAGAAAGTGAAGAGATTATATATTAGTATATAAATTTTTACATTTTCCAAAAGAATGAAAATGTATGTTTCTTTGTACTTTTCTTTTCAACCAGCTTCAAACCAATACTTTGCAATTTCAACTATTAGATATGATGCCTATATTTCTAATGCAGTTTAACAATTGCATACTTTTTAAAAGCTGCATTGTGTGATGGAAAATAGTTTTGATCAATTTTGTTATCCATATTTTAGACTCAATTTTAGATACAATGATGGCTTCATATTTCATATATAGAGCTACTCAAGGAGTTGTCCATTTTTTTCATTAACTCAATCTCCTTTCTAAGTTGAAAGTATACTCATTATTATAATCAAAATTTTTTTTGTTTCGTCTTGTGGCATGAATTTCCATCAGTTCCTTTCTATTTAATGTCTCCTAAGAGACATTTTGTCAGTAGAGGAATTTCATTGATGAGGTTATAGCACACCCCAAGGGAAAAGATAACATGCTTTCTTATATACTGCTGCTAAACTCAAGAAGCAGTTATAATTAGATTTTCTGTTTAAATGTGGTTATATTTAGAGAAAATTTTTTATGCAGCAACTTTAGAAGAGGGAATAAAATGTCGTAATTTTTGAACTTTTGTTTATGTTGTTAATAGTGTTGTGAAAATATTAATGTACTTGAGAAAAACTGATCCCATTGATGTACATCGGTTTCTATACAATCCATAATCCTCCTGTACAGTTTTTTATGTAGTTGTGGGTCGTACTGAAATTTATATAATGGATTTGTTTTCCTTTAAATTGTAAGATATTAAACACTTTGAAGGTTATTTTGGACTTTTGTATGTTTAAATGTTAAGTCTTACCAAATGTGCATGAATGGACCATTTTCAATTATTATTTAATATCAAAATCAGGAATTTACAGTCAACTAGTAGTGTATGATAGGTTAATATAGGGAAGTTTACTTATCTGCTACTAAGAGATTTTTAGATAGTTTTTAGAAGACAGAAATTCCATAGTTTGGGGAGGGACAACTTCTTTCTGCACTTTTTTTTTTTTTTTGCACAGAAAAGTCTATCATTAATGGCAAATTTCATGTTAGTTAATTCTTGGCTTAAAAGATACTAGGTAAAATTCTTAGTATGCATTTTTTAAAAGAAAGTTTCCTGAAGCTACCATTAATTGACATTGTTATCTCATGAATTTAATTTTTATATTCTTGTGTATGGTACTATATGAAATTACTTGAGAGCTAAATTTATTTTATAAATAAATCAGCTAAAGTTGAGGTTATTTACTCTTCCCATAATAGACAATAGATGCTTGGTATAGAACTTCAAAAGTAAGTAGGTTATCATTTAACCAGTTATTTTCATATTTTGCTTAATGGTACTTACATAGCCTAAAAGAATTTTTGTACTTCCCAAAGTATAGTTTCTTTACTAGAATATCATCTAAATGTGTATTTTCTATTTTCCATTTAAGTTTTACTGTGTTAACCCTGCAGTTTAATTGGTTGATCCTTGGAATCTCCTTAAGGAAGAACACATGTTAAAATGACATACAGGAATAAATATTAAAAATGACATATGCTTCTAATACTTTTTATTTGCCTTTATCTGGAGAAAGAAAAACACAAAGAAATTTATGACACAGTTTCGTTTTAGTTGTGGATTAGTTGCATCACAGCTAAGGTTTTTGGGAGGTAAAACTCAAGCCTGTATAATTTATTTTTCTATTTCACTCAAAATCTACTTATGTTACTTAGTTAAAATGATAAGCTATTGAAGTTTCAAGTCAAAACATCTAAAATAATTTGTTTAATCATTAAAATATGTTTTTAAAAATTCTAAGCAATGCTTAATCACCTTTAAATTGTCATAAGCTCTTAATTTATTAGCTTTGAATAAAGAACTATTTTTTCTAGTCCTTCACATAAGGGAAACTTGCCACATGAAATTGTATAGTCTTCATTTTTCAGAAGATACATTAATGTGCCATCAGTTTCTAACTTCTTTGAAAATAGTGTTTTTTTTTTAAGCCAATTGTAAATAGTATGCCTATTCTAGATAAAAGTAATTTTAAGTTAAACTGTACAACATAGCTTGAAAGTATAGAGACTTTGTAATACTTTACAAGTGGCCTCTGCTAAAAATATCTTATCCATATAATTATTCTTCTATTCTTTGCATGCCCATTTTGTGTGTTGGTTGTTAGCTTAAAGTTTGTTTTAATGTTAACTTTTGGGTGCCAGCTCATCAGGCAAGAATATTTTCCCTCAGACGTCATAATATTTTTCTTTTTAGGAAAAATATAAAAATACTTTCAAAAGCTGTGTTAAAGGAATGACATATCACAAGTGCTAGAGCATCTTTAAAAGGAAGAAAAGATAGAATATTAGTTGACTGGGTGATGAATGATGTTAAATTTGAATAATGATAGTTTCTGTATTCTAAACTTGATGAGAAAAAGGTACCAAGTCTATTGTAAAACCTGCTGTCATTGAGGAAGCTCTGAACAACCCTGGTTTCACAAATAACACTTTGAAAGAATTTGACCAATAATGTAAGTTTGGCTTGTGCTTTAGTTTTGTAAGGCATACTTTTTTGCTTCAATTTCTGTGTCCAGGAGAGTTTGGATGTTTAATGGTTCTTGAGCTAATTTTATAATATATTTAATATATTACCAGTTGAGATATATAAAATTTGTACATATTGAATTAAAAACCAGTTGCTAAAGTAGGTGTAATAGACTGAGTACAGTGATACCTGCAGGTTGGTTACCCATATGTTCTAGAAGTCATGACAGAACAACCAATTCATTTACACATCTTTGGTTTCTGTTTGAAGGAAAGTAAAATGATAAACTTGAGCAATATAATACATGCTCAAAGTTATTTCCCTATATGAGTAGTAAAGCTGGTGCTGAAGATTTTTGATCAGTTTCTAAAATTTTCTACTCAATGACTTACGTTTTGATTGCTTAGGAAAAAATCCTTACTTTTATTTGCTCTTATGCATTTAATCCACACGACAGCATATTACAGATTAATAGAATGAAAAGTTGTGCTCATACTGTACATTTATTTCTGTGCTTAAAACTACTTGTTAGTTTTTATTGAAGCTGCCAGCAATAAGGGACACATTACTGCTGTATTATACATTGTGAGATTGAATAAACAGCTTAAATTTTTTTCCTGGCGTAAGACACTTAAGCATTTCCATTATTGGAAGGAATTTGTATGGGTATTCTATATTTCATCTTGTTTAAAAGGACAGTCTTCTTTTTTTTTTGTAAAATCCATTTTAAACTACATAATGCAATTTGGAGCCTGTTTTTTTTTAGTGATAGTAGTAAATGTTTTATATAGTGCTACTGTGTTTGAATTAAAGAGAACAAATGTAAAAACTGAAATTAAAAAATTAGGCCTAGAAAACAAAATAGTGTATTAAGTTAGTTGAATGTAAAAGAAATTTATAAGATTTTTTTCCTATAGATACCTCACTTGAAAATAAAGCACAGCATACTTAAAGTAGTTATAGTTTAAAAAAAAAATCCTACTAAAAGAATTACTAAATCTTGAACAACTCTTGGGGAGAATTGTAGTTTGGGAGAAATAAAATATACTTGCTTTTAACCATCCTGTTAGAAGTATTTATTTATCCTGATAATTTTAAGCCAACACAGTAGTCTTAAATTATTTCTGAATTTCTAATCTGTGAAAGCAGTAAATGAAAGATCTGTCGTGCAACTGTTGAAACAAATTGTTGACTACATTGACCATAATTCAATTTAAAATCTTGCCAATGATGTACAGTTTTATGGGTAAAATTGCTGTGGTTGGTTGCATTACATGACACACAAAACTGTCCTCTACCTCACGTGAAATAAGTATTTTATATGGTTTTACTATAAAACAAGACTCATCTATCTGGTCACTTAGTTTACAAATTTTGAATTATATTTATTGAAACATGACATACTGTGCTCTTAGCTTATACCTCAATTGTATTTTGTGCTGTTTTCCATTTTCATGCCTTGTAAATAACTTGTATAGATTGTGGATCAAATTCCAAATAAAAACTTTTAATGCCAGTGAAATTGATTTAAGCCTTCTTGGTATCCTGTGTGAACTCAACTTTCTTGTTTCTTAAGATTGACATTTTCTCCTTTGGTTCCTTTAAAGTCTATTCATTACACAGCAAGTGACTAGGAACTTTTTAAAAATAGTAAAATGTGAAATTCTGTGTGATTTTGTTTTATTCTGTTGGCCATACTGCACAACATCTGGGACTCTAGTTCCCTGACCAGGGATCTAACCCTTGTACCCTGCATTGGAAGCATGGAGTCTTAACTAGTGGACTGCCAGGGAAGTCCCCTATGTGATGTTTTATGTGTGTTTATTGTGTGTTTATTCTTGCTTTAACATCCTTTCCTCACCTCCACC EMBV3_42341 CCCAGCACAGACGACGCTTCAATCAGGAGAATGATAGGGCAAAAGTTAAACAACTGTACC Gene GeneID:504789|BEND6:XM_002697169:191_cdna UTR3_Alt 2 NULL GeneID:504789 23 GENE BEND6 NULL BEN domain containing 6 EMBV3_13745 GTCCCACCCTTTGGAGCTCAGATGAACAGAATGAAGATCATGGCGTTCCTAACACTAGCC Gene BVT0102_177823 - 1 EMBV3_39035 GK000011.2:38511200-38706387 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04004 TTCTGAATGAAGCGAGTGAAGGGCCCAGAAACAGTGGGTGTGCAGTACCAGTACCAGGAA Gene GeneID:508556|MIER3:XR_083997:62_cdna Constitutive 0 NULL GeneID:508556 20 PSEUDO MIER3 NULL mesoderm induction early response 1, family member 3 EMBV3_26751 GTGACTTTGAGACCAGGAACTTCTGGATCGGGCTCACCTACAAGAGCGCCAAGGACTCCT Variant GeneID:516050|MRCL:NM_001102034:103_cdna 663^823 1 EMBV3_12731 GeneID:516050 18 GENE MRCL MGC159743 mannose receptor-like precursor EMBV3_35284 CTTCCCTCTCAGCCGCGTTGTGATTGTTAATGTGGCCAAAGCAAGCTCATTACTCAGAGG Gene BVT0102_122796 + 0 NULL GK000002.2:111631565-111739797 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103410 TCONS_00103417 TCONS_00103413 TCONS_00103415 TCONS_00106245 TCONS_00103414 TCONS_00103419 TCONS_00103418 2 XLOC_062106 XLOC_062753 Coding TCONS_00106245 XLOC_062753 NonCoding NonCoding - 2:111635265-111636862 - TSS78237 1374 1 TCONS_00106245_1 62 2 0.140350877192982 0.00280260267114662 0.000110932793018215 0.00163745370962294 0.00105175467199617 0.00156946354013138 0.000415774911189327 1.24614621072439e-58 0 0.000893016730412392 7.29001898235398e-87 0.000228445332875604 6.16072370739297e-22 0.000133122896413479 3.10476405666807e-84 0 0.00255684129993071 0 0.00498848275553163 0.00451642048511859 0.00499363624825367 0.000598536761166432 0.000147510388665383 0 0.000157891444486957 0.00290988169406613 0.00410139767380971 0.00181279467699097 0.000215425468708695 8.7856259381281e-05 1.28395458627018e-05 0 noncoding 0 0 0 0 0.714738832363058 0.0695322714298668 0.00251705110925867 0.95877277091079 ACTTGGGCATGAAACACATTTATTGGTCAAAACTTTACAAACAACTTTTTAAAAAACATACAGCCACACGTCCAACATAGAAAATATAAAAATCTATCATCTCCTATAGGATTTAACATGTAATAAATTGTTACTCCCTAGTATTGAATGATAGAGAGGAGGCAGTCTCAGAGACATTTCTCTGGTTTTTACTTAGAGACTTAAATTATTTCTTAAGAAACACCATGAGGAAAAGTCACTGCAATGCTGGAGAAATTTTGGTAGCACTCTGTGTTTTGTAAATACCAGGCAAGTGAGACAATTGTTCGAACTCACCACATGTCTTGCGGGAACACAGGCAAATGAGGAAAGTACAGGAAAAGTCAGTAGGTAAATCTGCATCTCCCACTAAATGTCATCATGAAGACAGAAAAATGGCCAGCGAGGGACCACAGAGATAGAGCCAGAAGAAACCTTGGAGACCATTCACTCCTAACTCTATTTACATAGGAACTCAATGATCCCAAGTCACTTAGTCCATTAGTGGAAGGCCAGAGACTAAAGGGGGATTTGAACATGGAAGCCTGGAGAGTAGAAAAGAGTGGGATAGTTATTTTCTCTGATTGTATCGATATGACTGCAGCTCAGTAAATGAGGGCTTGAAATCCAGCCAGAAAGACCTGAAGCTCCAAGTTGGTCTGCAAATGGAACAAGGGAGAATCATGCAAACCCTTGGGAATACAAGGAAAGTCAGATTTATCTTTATTCTCAATAGAGCCTAAGATAATTCTTAACCAGAATTTAAGAGCTATCAAAAAAAAAGCAGCTGGATGAGGCCAGAGCCAGAATGGACACAGGGCTTGGAGCTGACCAGGGAGACAGAAGCCCTGTTTGCACCTCTGAGTAATGAGCTTGCTTTGGCCACATTAACAATCACAACGCGGCTGAGAGGGAAGATCTTTGCAGGGTCTGTCACTCACTCTGGGCCTGAGACACCTTGCCCCATCCTGCAGCTCTGATACAGGAGGCTCCAGAGCCCAAGCTCGCTGTTGGAAACTTGGACTTTGCCCAGAGGCATCACCAAAATAGCTCTTGCAAAAGGGAAAAATCAACAATGCGGTGTACTGGCCTCAAGAAAGAAAAATGTTCTCCATCCCAATAAGACCGAGCTTGCTCCCGAGTTGTTAATCCCTTGCCTTAAGTGTATTTTTAATCCTACTCTACTTTTTTGGACACTTTTGCTTTATAGGAGGATTCTTGGTCTGCTCTCTTGGGGCCAGGATCAAAACATACACAACACAGAGATTCCACCACCTAGGAAATCCTCACCCAAGAAAACCTATCTGTGGATTGAGATAACCTTCTTTTTCTCATATAATACATTAAGGCACTCAG TCONS_00103419 TCONS_00103419 r 5' 0 TCONS_00103419 TCONS_00103419 r 5' 0 EMBV3_29055 GAACCGGGTCATCAACTTCTATGCAGGAGCAAACCAGAGCATGAATGTTACCTGCGTGGG Gene GeneID:282562|ATP1B2:NM_174677:436_cdna Constitutive 0 NULL GeneID:282562 19 GENE ATP1B2 MGC166226 ATPase, Na+/K+ transporting, beta 2 polypeptide EMBV3_41823 CTGCTACAGTGATGTCATAATTGTGTAAGGGTAGTAGTTACCAGATTTCCTCTAACATGA Gene BVV0102_032650 + 0 NULL GK000001.2:98370755-98377177 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004694 TCONS_00004685 TCONS_00004684 TCONS_00004696 TCONS_00004691 TCONS_00004683 TCONS_00004693 TCONS_00004697 TCONS_00004687 TCONS_00004690 TCONS_00004688 TCONS_00004692 TCONS_00004698 TCONS_00004695 TCONS_00004689 TCONS_00004686 1 XLOC_001086 Coding TCONS_00004690 XLOC_001086 Coding Coding MYNN 1:98374299-98392814 j TSS2333 5590 1 TCONS_00004690_5 232 0.0618962432915921 7 0.698444420438587 0.000383303681624323 0.00049939788693359 0.000488421025703465 6.51040550711316e-05 6.24460650263679e-05 4.16019716765902e-05 8.49098894122896e-05 0.000119028870442717 1.5924224240556e-08 4.31705030894712e-05 5.90136987854658e-19 5.34486019996668e-09 1.20414613626219e-05 0.000136396482822747 0.000140939598780323 0.000299905937910015 0.000143498590051037 6.80020389667895e-19 0.000281666475898072 6.63172468124836e-13 5.36031593197425e-05 9.46516259245499e-05 8.13900320206026e-19 0.000538338928963412 0.00041077589881903 0.000178818238043351 1.9845651490877e-05 1.25638170644223e-22 0.000122362275306609 6.90304826528855e-06 XM_005201693.1 MYNN PREDICTED: Bos taurus myoneurin (MYNN), transcript variant X2, 0.0 7230 100.00 0.716994633273703 NM_001185118.1 MYNN Homo sapiens myoneurin (MYNN), transcript variant 2, mRNA. 0.0 1501 86.90 0.222003577817531 TCONS_00004690_5 sp|Q9NPC7|MYNN_HUMAN MYNN_HUMAN Myoneurin; 8e-158 456 92.24 0.995689655172414 6 coding 0 1 1 0 -0.000102414985196431 0.999466268942615 0.00929692186024764 0.855581054950839 GTCATCGTGGAGGAAGCAGGGAAAGGCGGAGCGTGGCGTGGTGACGTCCTTCCAAGATGGCGGAGAGAGAGTGAAGAAACTGTTTTCCCCCTCGGGTTTCTATAAGAACAAGGATAGAATTCGATTCCGATATCAAAATGCAGTATTCGCACCACTGTGAGCACCTTTTAGAGAGACTGAACAAACAACGGGAAGCAGGTTTTCTTTGTGACTGCACCATAGTGATTGGGGAATTCCAGTTTAAAGCTCACAGGAATGTGCTTGCCTCGTTTAGTGAATATTTTGGTGCAATCTACAGGAGCACTTCTGAGAACAATGTCTTTCTTGATCAGAGTCAGGTGAAGGCTGATGGATTTCAGAAACTGTTGGAGTTTATATACACAGGAACTTTAAATCTTGACAGGTGAGAAGCCATACAAATGTGAATTGTGTGATAAAGGATTTGCTCAGAAATGCCAGCTAGTCTTCCATAGTCGCATGCATCATGGTGAGGAAAAACCCTATAAATGTGATGTATGCAATTTACAATTTGCAACTTCTAGCAATCTCAAGATTCATGCAAGGAAGCATAGTGGAGAGAAGCCATACGTCTGTGATAGGTGTGGACAGCGATTTGCCCAAGCCAGCACATTGACCTACCATGTTCGAAGGCATACAGGAGAAAAGCCTTATGTGTGTGATACCTGTGGGAAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGGAAACATACAGGTGAAAAACCATACATATGTGGTATTTGTGGGAAAAGTTTTATTTCCTCAGGAGAGCTCAACAAACACTTTCGATCCCATACAGGAGAAAGACCATTTATCTGCGAATTATGTGGAAATTCTTACACAGATATTAAAAATTTAAAGAAGCACAAAACAAAAGTACATTCTGGTGCAGATAAAATTCTAGATTCCAGTATAGAGGATCATCCCTTGAATGAACAAGACTCCATACAAAAAAGTCCTCTGTCAGAAACTCTGGACGTGAAACCTTCTGATGTGACTTTGCCACTGACTCTCCCACTGGGGGCTGAGGACCACCACCTGCTGCTGCCTGTCGCAGACAGCCAGCCTCCTGCTCCAGACGCGTTGCTGAGGCCAGCCGCAAATGGGTATTCAGAGCCACAGTTGATTTTTTTACAACAGCTATATTGACTTTGTGAGGAATATGGAATTGCTAAGACGTCTCTGGTAGTAAACATAAACATTGCTGGTAAGGTGCATATATTCATATTAAATTGACCATTCATTTGAGTTGTGACCATTATTCTCATTCACCAAAGTAAAAGCACCTGATGCTGCATCATAGCTGCAATGCTTGTTTTGATGTTTGGCTTTTATGTCTAGGTTATACACACAACTTTTAAAGGAATGAATTATACTGCAGTAGCACTATTTGGGGTGAATAAGTATAACTTTGTTTTAGAGCTGCCTTAATTCCATTTCTGTTTTTCATTTCAGATTGCCTTTCATTTACTGAAGTGAAATCTATCAGTTTATGATTGAGTTTTGACCTGTAAAATATATTTATTTTCTTCTCAAAATTTAAACAAAATCCATAATAGTATCAGCCCATGACAGTGCTGTTAGCAAGCTCCATACACCAGTATATAAACTATGAAAGTTGCTCAGTCGTGTCTGACTCTGGCGAATTCTCCAGGCCAGAACTGGGATGGGTAGCCTTTCCCTTCTCCAGGGGATTTTCCCAACCCAGGGATTGAAGCCAGGTCTCCCACATTGCAGGCGGATTCTTTACCAGCTGAGCCACAAGGGAAGACTTTCACATTCAAACTGTGAGGGGGGAAATTCATATTTCTACTATAAAAATTGAGGTACTGAATAAGAATTGTGCTATTTCTCTATTAATATAGTGCACTGAAGGTAACTTTTCTAATGAAACAAAAAGTGCTTCTCTTAAAAACTAGAAAACTAGATATAAATTTTGTTGTGTAGAACTCAGAATTCTGGAGAAAATCAGTGGTCAATACTTTTTTGATTTAAGTTGTCTGAGACTACATTTTCAAAATGAATTTTAGATAGATATTTGGTGTTTTTATCTTATTAAAAGCAGTTTCAAATTTGATGCAGACTGTTTAATAAGTTTCTAGATTATTGGAGATGAGGGAAATATACTGAGTTGTGTTTTGATAAGCTTCTCTTATACCTCTTATGCACTTTTTAAAAAATAAAACCCTAAAGAATTTTCTAAATAGAAACTTAGTGCATAGTATAAAACACTTGACTTCTGAATTTGGTACATTATATTCATAAATTGTTAAAAAATTAACTTCAATTATAAGTAGACATTTGAGTTATCAGAAAGCCAGTTTATTAAACATTTTATATTTGAGTTTTTTTTATAAGTTTCAAGTTTAAAATTTTTATAGATTAAACCATAACAGTTGGTGGTGGCTGTAGTTTCACATTAGTCCTTTCCCTTCTTAATGAACTTAGAAAATTCAAATTTATTCTGATACTACCACTTGCCCCTTCCATTTTCCCCACGTATTGATTTAGTCTCACTGCCTAGTCTTTGGACATTAAATTTTTAGTTCCACAAAGTCTGTTCCTATACTACTGATTAAACACCATGGTGACATTATTTCCTATTTCTGCCATGCATTAGTTATGGCTCATTTGTTTTCTGCTTTTAAACTACACCTGTAATAAAATTAATATATTTTCTATTGGTATTGATTTCTTTAATTGTGTTTTCTCTGGGGTCCTAGTCATAGGAACCAACTAGAAACTAAACTCTTGTAAACTGTACAGATCATCACCATTTCACAGCACACTCAGCATTTTCACAATAAACTGCCACCAGTGGGGTTGACTTAGAGTTTGAAATACTGCCTTTGTACAATGTACATCAAACTTAGTATTTAATTTATCTAAGAAGTCTAATCATTCATATGTATTAATATAATATACAGGATTTAAATACAATTTATAAAGTTATAAAAATGTTCAACTAATCTATTCTGGCTTAAATTCAATAGGAATTTATTGGAATGTGAAGAAATTAAAGAAAATTAAGACAGCCTTTTTAAGAACTCTGCTGAAATGGAGAGGCTATATTTAATTCACATCTTCATTAATCCAAGCATCTAATGAACAAAATTTCTTTTTAAAAACTGCTACAGTGATGTCATAATTGTGTAAGGGTAGTAGTTACCAGATTTCCTCTAACATGATGGTAATTAGTATTTTGTCTTTACATAAATTAGCCTTTACATTTATTATTTGTCACATTAAAGGATTGAAGTGGCTAAGGTTGATTTATTGTGTTTTTCTTCATCACATTATCTGCTTCTTAGCTAAAATAATTTTATTTTAAATTGCCATGGCATGACACTCTTCCAGAATGACTTGTAAAGAAAGTTTGAAGACTGAGTTTTTCTCCTGTCATCTTCTAATGCTGTATTACTATCATATGCGTGTATTTTAGTTGTATCTGCTATCATTGTAACACTCAAAATTATCAGTTAAGTTCATCTTTAAATATATTTGTTACAGTGCAGTGTTTTGGGAAAGGTCTATTCTAAATTATGTAAGTATTACTACATTTTTTGAAAGTCTTTTTAGAATGCTGAAGATCTTACTAAGAAATTATTTTCTAAATTAATTTTGTTTTGTATTTGTATTAGATAATTCCTTCTGTATTGTTAGATTTTAGGCTTTTAAAAAAGAAACCATAGATTATATATAAAGGATTTTTTGCTGGTATGTTTTATGTTTCGTTTCATAGACTGATTTTGATAGACAGATTTTAGAAAAGTGTTTTATTTTTTTCCAAAAGAAAAGGTCCTGTCCTGTTGCAACGGTAGTTTGTCACTTTTCTGTATGTTTCATGTCTACAGAAATTATACAAATGATAGTTGAAATATGCTTATATAAAGACAGTTAATCTACGTGTACTCATTTAAATATCCTAGTACGATGGCTCTAACATTTGATACACATCAAAAACGTTTTTAAAATAGTTGTGTCCAAGCCCCACCACACCTGGGGCCCTCTGCATCAGTCTCCAGAACATGCTAGAAAAGCTCCATAGGTGGTCTTAATGCATACCAAACATAGAAAACGATTATCCTAAACACTTCCTGGTGTTCTTCCTTTCGGCTCTTAATATGTGGTTATGTGGGCACTATGTTTTTTTTTTTTGGCTGCACCCTGCAACCTGTGGGATCTTAGTTCTGTGACTAAGGATTGAACCTGGGCCTTCGGCAGTGCAAGTGTGAAGTCCTAACTACTGGACTGCTAGGGAAGTTCCTATATTGTCTCTTGATAAATGAAGCTCTTAATATGACTTTCCACTTTTTACTCAGATTTTGAGTCTTTGGAATTTGGCTAGAAATACCACCAAATAAATTGTATTTTAATGCCATTTCTGTAAATTCTATGTTTTTACTCATTATTTATGAACATTATTGATAGTTATCAGAGCATTTCTTGAGACAGTGACATGATTTACTTACCTGTCCTCTGCAGCCCCCACCCCACTTCATTCAGCAGAGATGTGATGTATTTGCTTAAGGGATTTGGATAATTATCATGTAAACATAGTAGTCATTCAGAAATAGGGTATTTATTTTCAAGAAGTATATACTGAAATAAACACCATGGATATGAATCAAGTATTTGAATTAAAATATCTGGCTATTACTTGAAATGCTAGAAAATTACTGAAATCAGAATACATAAAGTGAACAAGATGATTTCCTCTTTTAAGTTTACAGTCAAATGGGAAAGACAGGCCTGAATGCCAAGTGTTATAACAGAGGAAGGCAGGAAAGGAAATGTCAAGCAGTCAGTAGAAATTGAACGGACAGAGAAAGAGCTGTTGCTCTCCTGGATAGGCAGGCAAGAGGAGATAGCTATTGGGAGGGATTTGTTCACAGCTGACTGAGGTAGGGGAATGGAGAGAAAATCTCAAAGGTGTTGGCAGAGATCGGAATCATCAAAGACACATCTAGGACTATACCCCTACCATCTTGAAAGAGTCCTCTGCCTTTCACTTGTGCTGGAAGAATGGGATTAGATCGCCAGGTTTACATTCCAGGATCTCACACCCTGAACTACAGTTGAATGCTAAAGGGCCACGTTTTAACATGCTTGTGATTCCATGCTTGTGATCACAGCTTATAGAACACCTTACCAGGAAGAAAACAGTTCTTAGCCCAAACAAGCTACTTCAGACACTTGGTTTATGTGTACATAAAAAAGATCATTTAGATCTGGTCCATAGTTAGTGAAGCAAGCCAAAAATCTAAAGGAAATAGTGAAGAAGCAGAGAAAGCTGATCTAGAGAACAAAGCAAGGGGATGAAGTAGGTTTGTAGAACCAAGTGACCACGACCCTGTGACAAACCAAAGTGGCCTGAGGCTTTGCAGTCCCCAGTCCCACTTGAGGTGGTATAGCTATGCTTGTTTGCTTGTGCCTGAATGCCCATGATTTTTGCCTATTAAATCCTTACAGTAAATACCCCTTTTCTTTTTTTGGCTTTGCTGCTCACCTTGTGGGATCTTAGTTCCCCAGCCACAGATTGAACCTGCAAATTCCCTAAATC EMBV3_18643 GGTCCGGGGAGGCGGCGGCGCCAGCGATAGCCAGACACTGACGGCCCCAGGGCCAGGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04356 GGGTTTCTTGATTTGGTGAGAATTGCTGCCAACTGAGACCCCTTTCCTCACAGGTTGTAG Gene BVT0102_300479 + 0 NULL GK000010.2:35958916-35984429 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14174 CGGCACTGCAAACCCATCTACGAGTTCCACGGGCTGTACGAGGAGAAAAAACTGTCTCAA Gene GeneID:514898|P2RX1:XM_002695752:204_cdna Constitutive 0 NULL GeneID:514898 19 GENE P2RX1 NULL purinergic receptor P2X, ligand-gated ion channel, 1 EMBV3_10097 GCTGGCGGCTTGTGGGACTGCCCATTCACCTGCTCTTTCTTCGTTTTTATAAGCGTGACA Gene GeneID:538804|C23H6orf136:NM_001038178:171_cdna Constitutive 0 NULL GeneID:538804 23 GENE C23H6orf136 C6orf136 MGC134530 chromosome 6 open reading frame 136 ortholog EMBV3_10576 TTAATCCAGTGACTGTCCGATCAATCATATGGTACCGGCTCTCTGACCAGTTTCATGACA Variant GeneID:100125927|PDCD6:NM_001105497:5_cdna 246^404 1 EMBV3_31490 GeneID:100125927 20 GENE PDCD6 MGC140796 programmed cell death 6 EMBV3_36150 CCTGGGCAACAGTCGAGCAGTCAGGGAAGAGAAGCATCTGTAAGTAGGCCCAAAAAAGGA Gene BVT0102_135003 + 1 EMBV3_30121 GK000026.2:31744684-31793980 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152107 1 XLOC_092257 Coding TCONS_00152107 XLOC_092257 Coding Coding LOC100847755 26:31745404-31762309 = TSS113527 1018 1 TCONS_00152107_2 69 4 0.940014197823 0.00213177718082478 0.00181018192855972 0.00219861948361842 0.000935977425943573 0.00116899324704656 0.000119619204878549 0.000397546912487751 0.00100619737355301 0.00160542508920881 0.000377650192542894 0.000424961843041222 0.000203722847339558 0.00014797383699398 0.000556652808170251 9.02647631084639e-05 0.00162883021274815 1.98758423383688e-74 0.000300425786269181 0.00194630135453747 0.00169786943291947 0.000336668328322031 0.000839166529026974 0.000153970766512965 5.49830821293134e-05 0.00133285109007259 0.00219941578542623 0.000588229006140841 4.23294958105068e-05 0.000195519519129965 2.84350495188755e-12 XM_003584100.2 BBIP1 PREDICTED: Bos taurus BBSome interacting protein 1 (BBIP1), 0.0 1779 100.00 0.967583497053045 NM_001195306.1 BBIP1 Homo sapiens BBSome interacting protein 1 (BBIP1), transcript 6e-143 511 77.99 0.632612966601179 TCONS_00152107_2 sp|A8MTZ0|BBIP1_HUMAN BBIP1_HUMAN BBSome-interacting protein 1; 1e-34 116 84.29 0.985507246376812 1 noncoding 0 0 0 0 -0.135692773629998 0.331785982697982 -0.00344903213097622 0.955679989169829 CACAGTTGCCCTGGGCAACAGTCGAGCAGTCAGGGAAGAGAAGCATCTGTAAGTAGGCCCAAAAAAGGACCAAAGGTGACCAGACATCCCATGTAAAACAAGTTAATTCCTATTCCGGACTACCTTCCCGTTTGCGGGATTAGAGACAGCAGGTTTCCCGTCCCTTATTTTGCTGGGACGTCTGGTCACTTACCTAGGTGGACAGGAGTTTAGAGCTCCGAAAATCCCTGTTCTGCCCGAAAGTTGCATTTGACACTTCTGAATAGGGTCATGGCAGAAGGATGGGAATAGCTTGCGCCCCCCTTGCCCCAGGGAGTACCCATTCTGACAGGAGTCGAGAAGTGAGTTCCTTCTGTAGGTTTGAGTCAACACCTGTCAGTCATCTTCGTAATACCGGCTTGGATACCTAAAGCTGCGGGGAAAAAGGATCAGGAGAACTTTCAGGACGAGACTGTATCCAACATTTCAGATATGGCAGAAACGAAGTCGATGTTCCGGGAAGTTCTTCCAAAACAAGGGCAGTTGTATGTAGAAGATATAACCACAATGGTGCTATGTAAACCCAAACTTTTACCATTAAAATCTCTGACTCTGGAAAAACTGGAGAAAATGCAGCAAGCAGCACAGGATACAATTCACCAACAGGAAATGACAGAAAAGGAACAGAAAATAACTCACTGAACAATGGCAAGTAACTCACTGAATGATAACTAGCACTTCTACAGAACACCCTACACCTTTCTATTAACAAGAGCTGAAAATAATCTGCATCTGTATGCTGAAAACAGTATGTATTAATAAAAGATAGTATCCCTATAAAAAAAACCAGATTACTAACATTTGGATTGTGAATTTAAACACTGGTTTGTATTGAATATAAGCAATTTTAAAACTTTGAAAAGCTTGGGTTAAAAATAAAACAAAATCTGGGTTCAAACTACAAATTACTGTTCACCATTCCTATCAGTTTTCTAGATAACATTTTTAGTTAGGCAAAGTGAGTAAATGCAACTTCTTT EMBV3_34723 GCCATAGGCTAGTGAAGTTTGGCTATATTCCCTGGTGCTCCCAAAAACAACACCCCTCAC Gene BVT0102_006445 + 0 NULL GK000003.2:16310537-16318127 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20107 CCCCAGCGGTCCCGCCCAACGCTGGACTCGGTCAGCATGGATTCCTGGTTCCTTCTTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12632 CGTCACTGAAAATGAATGTCAGAACTACAAGTATCAAAGGGAATACAGTGAATTTAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16418 TTTTGTCAACTTTACAGACATCTGTAAACTTGGTTCTATAGATGGTAATAATCAACTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28572 TTCTGGGTGACCCCTAAGGCTTCAGGCAAGAGGCGGACCTGGTGGGACCTGCAGACCTAG Gene BVV0101_083973 - 1 EMBV3_03816 GK000018.2:26043125-26077403 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22122 GAAGCCCAGCCTTCTGTCAAAAGCCCAGAACACCTGTCAGCTTTATTGCAAAGAACCGCC Gene GeneID:539570|SIK2:XM_002692988:147_cdna UTR3_Alt 2 NULL GeneID:539570 15 GENE SIK2 SNF1LK2 salt-inducible kinase 2 EMBV3_04806 GATGCAAGTGAGAAGAAAGCAGTGATTTATAGGCACTGGAGCAGAACAGGGGAGTCATGG Gene BVT0102_159643 + 0 NULL GK000010.2:41944602-42626119 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016956 1 XLOC_008939 NonCoding TCONS_00016956 XLOC_008939 NonCoding NonCoding - 10:42309678-42333713 - TSS11711 257 2 0.989390030789715 0.00100586823665687 0.000332340854360306 0.000720154811405798 9.69356290434243e-05 0.00110462118048256 0 2.2691509209566e-05 0 0.000307008913140694 0 0 0 1.11645056894879e-05 0 0 0 0 0 0.00110325718819264 0.0048337534482453 0.00105436439059573 0 0 0 0.0012591473461034 0.00085099219534594 0.00122142047002137 0 0 0 0 noncoding 0 0 0 0 0.169037797047835 0.398801489767045 0.0137958685075991 0.851000792837026 CTGATTGCATTTCAGAGCATGTTTTGAATGGAAATACGGGCCCTCCAGGAAATTTGTGTTATCTTGGAGGTACTTTAGAAGAGGAGAAAGAAGCAAAGATGCAAGTGAGAAGAAAGCAGTGATTTATAGGCACTGGAGCAGAACAGGGGAGTCATGGAAAAAAAGCAATTAACGAATAAAGGAAAAAAGTACCAATAGTGAACAGGAAAAAAATCTTCTGAAAGCTAAAGAAGAGAGAATAATTGATGGTTACATTT TCONS_00016962 s 3' 359455 TCONS_00016962 s 3' 335558 EMBV3_36979 CTGGTAGATGGCTTTTCTTTCCCCTGCTTAAAATGTTAATCATTTTCAATAGAACAAACC Gene GeneID:534284|SETX:XM_002691649:371_cdna Constitutive 2 NULL GeneID:534284 11 GENE SETX NULL senataxin EMBV3_11258 CTGATGTTCTCCTTGGCAAACGTGCTGGGGAAGTCCCAGAAATACAAGGAATCCGAAGCT Gene GeneID:539972|TMTC4:NM_001105629:26_cdna UTR3_Alt 2 NULL GeneID:539972 12 GENE TMTC4 MGC139344 transmembrane and tetratricopeptide repeat containing 4 EMBV3_37502 GGGAGGCTGGGGCCCACAGGAGCTCTGCAGGCCCCAGTGGATCAGGCCACACAGAGCTGC Variant GeneID:504643|MUC20:XM_002684818:244_cdna 77^202 1 EMBV3_02372 GeneID:504643 1 GENE MUC20 NULL mucin 20, cell surface associated EMBV3_35250 ACCAGAAAGGACTGGTTAGGGTGTGGTGGATTTCTACTAAAGTCTGGTTCTTGCCGGGGA Gene GeneID:503622|FOXA3:NM_001033119:112_cdna Constitutive 0 NULL GeneID:503622 18 GENE FOXA3 HNF3-G forkhead box A3 EMBV3_33427 AGAACTTGAGCCTGTTACCTTCCTTTGCACACCTGCCCCTACTGCGTGCATCCCTTATCT Gene BVT0102_079048 + 0 NULL GK000015.2:54224047-54340539 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25871 ACCCTCTGGATAGACAGATGTTAGTCTGCATGGCGTCTTACCCCTTGGTTCATCAGTGGA Gene BVV0102_444441 + 0 NULL GK000004.2:84081102-84628018 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06392 CTGGGGTTAGTCCTCTTCCAGCCATCCAGATCAATTAGAGATTCTCAGAAGCAGTGGAGG Gene GeneID:522429|ANKRD40:NM_001101109:109_cdna UTR3_Alt 2 NULL GeneID:522429 19 GENE ANKRD40 NULL ankyrin repeat domain 40 EMBV3_18790 AATGGTGGAAATCGTCACGAGGGAGTTTGTTTTAATGGCTGGGACTGTGGACGTGGTGGA Gene GeneID:767847|PMPCA:NM_001076964:223_cdna UTR3_Alt 3 NULL GeneID:767847 11 GENE PMPCA MGC139568 peptidase (mitochondrial processing) alpha EMBV3_30424 AGATATTGATATGTTCCTGGAGGAGACGCCCGTCAAACAAGTGAAGAGGCTGGCGCCCCA Gene GeneID:100316905|LOC100316905:XM_002689763:22_cdna Constitutive 9 NULL GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_33916 GCTGTGTCCTTATTGTTTCCACAGCTCAGATTTGATGGCATTTTGGTGCCCAGATACATC Gene BVT0102_177798 + 0 NULL GK000006.2:16867963-16870811 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204539 TCONS_00204541 TCONS_00204544 TCONS_00202582 TCONS_00204543 TCONS_00204540 TCONS_00204542 TCONS_00202581 TCONS_00202580 2 XLOC_124469 XLOC_124004 Coding TCONS_00204542 XLOC_124469 Coding Coding CCDC109B 6:16868063-16966187 j TSS152994 2601 1 TCONS_00204542_1 335 0.0442137639369473 9 0.973584174964076 0.00290620234239452 5.46808580788797e-05 0.00161657751258155 0.00113772162852126 0.00260377812586765 0.00114242842407121 0.000250044908897958 0.00107961202856017 1.85408501936603e-07 0.000177187478232795 2.26804345753324e-05 4.62270469956112e-06 0.000531896339175381 7.52256988238944e-08 0.000351391220902541 0.000166247294398787 1.82697748591364e-69 4.65127057641625e-14 0.0019187586024677 0.000688491532494429 0.00154228637600486 2.36479735928761e-17 5.58762954524639e-05 2.93769991816633e-11 0.0050884867323739 0.00384119483336899 0.000205113882146701 1.13345135828185e-58 4.69836922044054e-35 2.24254962173614e-05 NM_001075171.2 CCDC109B Bos taurus coiled-coil domain containing 109B (CCDC109B), mRNA. 0.0 2221 99.92 0.474048442906574 NM_017918.4 CCDC109B Homo sapiens coiled-coil domain containing 109B (CCDC109B), mRNA. 0.0 1251 83.40 0.454440599769319 TCONS_00204542_1 sp|Q9NWR8|C109B_HUMAN C109B_HUMAN Coiled-coil domain-containing protein 109B; 0.0 527 80.90 0.991044776119403 1 coding 0 0 0 0 0.337606190804186 0.412977857884711 -0.00725974673225727 0.887745410515394 GACGGATAACGTCGGCTCCCAGCGGCAAGGCGCCGACGATGGCCCGTTGACTGGAGCAGGAGCGCTGCGCCCGGCGGGATGATGCTCCGGAGGGGCCCCTGGCCCTGGCGCGCGCGGCTGCTGCCGACCCCCGGAACCCAAGGCCATGCGCACCCGCGGCCGCCGATGCCCCAGGTTTTGTGTGTGAAACTGTGTGGAAACCTGAAATTCTATCAATCAAATCTTTATAGTACACTGGTGCCATCTGATGAAATCACAGTTAGTTATAAACATGGCCTTCCCTTGATAACACTTACTCTGCCATCCAGAAAAGAGCGCTGTCAATTTGTAGTCAAGCCAATGTTATCAACCGTGGGTTCATTCCTTCAGGACCTACAAAATGAAGACAAAGGTATCAGAACAGCTGCCATCTTCACAGCAGATGGCACTGAAATTGCAGCTTCAACCTTGATGGAAATTTTGCTAAAGAATGATTTTAAACTTGTTATTGATAAAATAACATATGATGTACAGTGCCCTATGAAAGAAAACCTGAGCAGCGAGCAGGCTACTGAGATGGAAAACATGAAATCTTTGGTTTACAGACTGTTCACCGCCTTGCATTTAGAAGAGTTTCAGAAGAAGAGAGAGCACCATCTGCTGGAGAAAATCGACCACCTGAAGGGACAGCTGCAGCCCCTCGAACAGATGAAAGCTAGAATCGAAGCTCGCTCAGAAGCCAAAATCAGTGGACTCCTGTGGGCTGGATTAGCGATGCTGTCTGTTCAGGGCGGAGCAATGGCCTGGCTCACCTGGTGGGTGTACTCCTGGGATATCATGGAACCAGTTACATACTTCATCACATTTGCAAATTCCATGGTCTTTTTTGCGTACTTTATAGTCACTCGACAGGATTATACTTACTCAGCTGTAAAGAGTAGGCAGTTTCTTCACTTCTTCCATAAGAGATCAAAGCAACAGCATTTTGATGTGGAACAGTACAACAAGCTAAAAGATGACCTTGCTAAGGCCACTGAAGCCCTGAGACATGTGCGCCGCTCTCTCTATTTGCGGATGCAAGTAGAGGAACTCGATGAAAGGAAGTAATCTTACATTTTTATTAATCTTACATTTTTAATGTCAGTGAATTTTTCCATGATGTGTTTATTTTGCAACTGGAACTTTTTGAATCCCACAGTTCATTTGCATTTGACTGTTTCAATCTCTTGTTAATTAAAAAAAAATGCTTGCAAAACACAGGTATTCTATGATGCTCTCATTTGAGATTTTCGGTTTGTGGATTTTCACGGCTTGTTGAGGTTTACTGCTGGAAGGATCTGGGCTGCACCCATCAAAATCAACGCTGCTGCTGTTACAGGTCATCATTTAAGCAGCTCTGTCAGCCTGTCCCGTGTTCCTTCCTGTGCGGACGTGAAACGGTGAAACTGATATCTGAGCACCGGGGATGACAGCTCAGTGATCAGAGGCAGGACGTTCTGCCCTTTTTTGGTCCTTAAACTGTAGTTTCTCAAATGGGAGATGTCATGTATGTTAAAACGTTCTTGATGAGAGATCATTTATTAACACACACAGAGTATGATCTTTCTACTCAAGTTCCAAGTTAAACAGACTGAAACCAAAACTAAAGGATTCCAAAGAAATTGCATGTTAATTTTATTACGAAAGGGTTGTCTTATCCTGAGACAACTGTTATAAACAAAATTCAGCTGTGTCCTTATTGTTTCCACAGCTCAGATTTGATGGCATTTTGGTGCCCAGATACATTGGTACCAGTGCCACTGCATCTGAACAAGAGGATTTTATTCAAATAAACCCTCTGACTGATCACTGAAGGAAAAAAAAAAGTGTGTGTATGCATGTGGTGGGTGGCAGCGGTTGAGCTTTTCAATAACATCAGCTAACTTCTCTTAGGTAACCAGAGCTATATAATCTTTGCCTAGAGGGCTGGCCTGTGCTCACTGGATGAGCTGAGGAGAGTTTCTGTAGTCATTCACCCTTGCAAGGAGAGCCATGGAGACAGCAGCACCTGCAGGTCAGAAGTTAAACTGTTCAACTGACAGTGAAAGCCCTGCCATGACCACAGGAAAGGGGATAAATGCCCCACTGACCTTGGCATGTAGTTGGCACATGTTTTGAACTATACCTGAAACAGCACAAACTACTGCTGAACCAGCAGGTCCCAAGTTTGTTATCAAAACCCAGACTGTTAACCATCTTCAGCCTCTGGCAGATGATTAACAAAGCATATTACTCAAATTTTACATATCATGTTAGTAAGAGCTGAATCTTAAAAATAACATCTGGGACTCCCCAGGCAGTCCAGTTGTTAAGACTCTGCACTTCCATGCAGGGGGCATGGGTTCAGTCCCTCATCTGGGAACTAAGATCCCGCACAGCACTGCCAAAAAAAAAAAAAAAAGCCACATCTGTTATTCCATAAATACGATGACGGTCTGTGAATGGGACTACCAGACAGGGCATAGGAACTCACCATGCAAGACACTGACAGAATCATACTTTACAAGTCTGTGGCCTCTACTGACTAGGAATTAACTGCTTTCTATTTCTTCTTCAAAATGCCATATAATAGTTCTTGAAGGC EMBV3_09020 GAGAGTCCACCAGTGAATCACCAATAGCCAGTAGGAAGATGGTCCTAATTCTCAGGAAGG Gene BVT0102_269858 - 0 NULL GK000001.2:127814895-127977929 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25804 TTAGATCTGGCCTTTGTGAACGAGTGAGGAATGGAGCCCAGAGGCTGATGGTACCTGCTA Gene BVV0102_047921 - 0 NULL GK000022.2:48409452-48499293 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131312 1 XLOC_080017 NonCoding TCONS_00131312 XLOC_080017 NonCoding NonCoding - 22:48413226-48414347 - TSS98179 1121 1 TCONS_00131312_2 85 0.0597680642283675 1 0 0.00035197711436603 0.000197203834974849 5.77858733085664e-05 0 2.20213274024594e-05 0 0 0 0 3.67037981474088e-05 3.2673469762356e-05 5.10358258284449e-05 0 0 0 0.000965989351299308 0 0.000111912995622209 0 0 0 0.000119154378638594 0 0 3.09031767655701e-05 0.000194834501645109 0 0 3.03142303563202e-05 0 XR_239403.1 RFT1 PREDICTED: Bos taurus RFT1 homolog (S. cerevisiae) (RFT1), 0.0 2022 100.00 0.999107939339875 0 noncoding 0 0 0 0 0.140222070503405 0.216256219001597 0.059964022871832 0.235405803067188 CTTTTTTTCCTTTTTCCTTTTGTAACCTGGAGTGACATCACGCGGGGCTGATGGCAAGATGCCCAAGCATGCGGGGCACTCATCTTTACCTCCCCTCCCCTCAGCTCTCCCTGCAGCAACCCTGCAAACACAGGGCCGAGAGCCAGGCTCTTTGGGGAGCACCCAGAGGTCCCTCCCGTCTGCATCAGCACCAGGGAGGCCCGCTTGCGTCATGTCCGCCTTCTGAAGCACACGAGCAGAGTTTGCTTTCTAAGCGGCCCACGGGGTCGCATCCATGGTTATACGCCAGCCTGGCTGCCCGTTTCTAACTCACTGGGTGGCCTTGAACAAGCCTCACTCTACCAACCGTGGCACATAGCAGGTACCATCAGCCTCTGGGCTCCATTCCTCACTCGTTCACAAAGGCCAGATCTAAGCTCTTTTGATAACCTAGCGCCTGAGAGGGCAGAGGGGTCTTCCACCTCCTACGCCAACTGGAGCAGCACCCTTCTGATCGGAATGAAAACTGGGGATTACTCCTAAGAATTTGCTTGGAAGAGGAGTTCTTTCTGTTAAAACAATGAAACCCTGTCCAGTTTGAAATCCACAAGTTTGAAGTTTTAAACCTCCTCCCTGACCTTCCATGACGTTTTCTCCCACAGTTCCCCCCGCTTTCCCAGTCTTCATCTCATCTTAAAGAATTTAAGGTAATTGTTTTGCACAGCCACTGGCATAAGTAACAGATGTTAGGGAGAAACAAATCTGGCCCCAAATTATGTTGTGTTACAAAGAAACAGTTGTCTCTTCCCCATGGTCCTCTCTCTGTTGATGGCCTTGAACTCAGGTGACATCACCAATGAGTGGGAAGGTGGCTGACTTCAGCCACTCCATCACTTTGTAACCATAGGCAGATCTTGCCTCTCTTTGCCTTGGTTTCCTCATCTGTCGCTAACCCACCTGGCATGGCACAGAGGGGATAGAAGGAAAACAGAGGCCGGACAGTCAAATGTAGCTCTGGAAGCTTCGGAGAAAACAGCCCATAGCAAGGCTTCCTATATGTCCTGTGTACCCACCTCTCTACCATCTTTCTCTTCTGCTCCTCGCCCTCGGCCAGTCCTCCCCTGACGCTCTCCACTCTAACC TCONS_00126997 . 3' 163 TCONS_00126997 . 3' 1283 EMBV3_39817 CTCTATGCTCCGATTTATCACTAAAGACCGTTAGCAGCACATTGTATGGAGACGTGGTGC Gene GeneID:787705|LOC787705:XM_002687523:477_cdna Constitutive 0 NULL GeneID:787705 5 GENE LOC787705 NULL similar to Putative uncharacterized protein C12orf63 EMBV3_19494 CCAACCCAAGAGCCAAACCTCGGTTTGATTACACATCCTAGTTTTCGCAGAATCTACTTC Gene BVT0102_162316 + 0 NULL GK000020.2:38070523-38077036 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113887 TCONS_00113885 TCONS_00113886 1 XLOC_069131 Coding TCONS_00113886 XLOC_069131 Coding Coding NADKD1 20:38026751-38071960 = TSS85061 3378 1 TCONS_00113886_2 442 0.0293072824156306 12 0.925544151477615 0.0255565991735335 0.0221957978589344 0.0216992471086517 0.0128367476740213 0.0153251496249356 0.00494983195522963 0.00906767666436213 0.00669939941234377 0.00907678978194519 0.000104821575248285 3.09620182942345e-05 2.73634462649028e-10 8.40460484154425e-05 0.000140654493330347 0.000167355093037729 0.00234729890992459 8.16010350500879e-05 0.00295902685326686 0.0297226935503647 0.0252175017682158 0.0077880906886583 0.000656843401192766 0.00074162018363513 0.00144790627095583 0.0236102986287096 0.0186175221168717 0.0130059482301799 9.41634921084552e-05 0.00022532230340029 0.000534827362591098 NM_001256553.1 NADKD1 Bos taurus NAD kinase domain containing 1 (NADKD1), mRNA. 0.0 6075 99.97 0.997631734754292 NM_001085411.1 NADK2 Homo sapiens NAD kinase 2, mitochondrial (NADK2), transcript 0.0 2877 81.63 0.875074008288928 TCONS_00113886_2 sp|Q4G0N4|NAKD2_HUMAN NAKD1_HUMAN NAD kinase domain-containing protein 1; 0.0 841 95.70 0.997737556561086 1 coding 0 0 0 0 -0.797416656232787 0.0382740368313446 -0.0852883971146562 0.386703712122082 AACCTCTGCGAGTCTGGCGAGAACCCGGAGGCAGGGGCGGCGCGGACGGCCCGCAGTGTTGCCGGCGGGGAGCCGAGGCCTGCAGCCGCTGCAGGGCCGACGATGACTTGTTACCGAGGCTTCTTGCTGGGCAGCTGTCGTCGCGTGGCTGGGGGCCGGGCAGCGGTGCTCAGGGGGCCGGGCGCGGGAGGCCCCACCGCGCGGCCGTGGCTCGGCGGTGAAGGTGGCAGCCGGCGGCACCTGGGGCAGGGGCAGCCGCGCGAGCTGGCGGGCTGTGGTAGCCGCCCCGACGGCGGCTTCCGCCCGTCCCGGGTGGTGGTGGTGGCCAAAACCACCCGGTACGAGTTCGAGCAGCAGCGATACCGTTACGCGGAGCTGTCGGAGGAGGACCTGAAGCAGCTGCTCGCACTGAAAGGCTCTAGCTACAGTGGACTGCTTGAGCGACATCATATTCACACCAAAAATGTAGAGCACATTCTTGATAGTTTACGGAATGAGGGAATTGAGGTTCGTCTCGTAAAGAGGAGAGAATATGATGAGGAAACTGTTCGATGGGCAGATGCTGTCATAGCTGCAGGAGGGGATGGCACGATGCTCTTGGCGGCAAGTAAAGTCTTGGACAGACTTAAACCAGTTATTGGCGTAAACACCGACCCAGAACGGTCTGAGGGTCATTTATGTCTTCCTGTTCGATATACGCATTCCTTCCCAGAAGCCTTGCAGAAGTTCTATCGTGGTGAGTTCAGGTGGTTGTGGAGGCAGCGAATTAGGTTATATCTTGAAGGGACTGGCATCAACCCCATTCCTGTGGACCTCCATGAACAGCAGCTGAGTTTGAATCAGCATAGTAGAGCCTTCAACATTGAAAGAGTTCATGATGAAAGGTTTGAGGCTTCTGGACCCCAGCTCTTGCCAGTGAGAGCACTAAATGAAGTCTTCATTGGGGAGAGTTTATCATCCAGGGCTTCCTACTACGAGATTTCAGTTGATGATGGTCCATGGGAAAAACAGAAGAGCTCTGGCCTCAATTTGTGTACTGGAACAGGATCAAAGGCCTGGTCATTCAATATTAACAGAGTGGCACCTCAGGCTGTGGAAGATGTTCTAAATATTGCAAACCGACAAGGAAATTTAAGTCTTCCATTGAACAGAGAATTGGTAGAAAAAGTAACAAACGAATATAATGAATCACTGCTCTATAGTCCAGAAGAACCAAAAATACTTTTCAGTATTCGAGAACCAATAGCAAACAGAATTTTCTCAAGCAGTCGCCAGCGTTGTTTCACCTCAAAGGTGTGTGTGCGTTCTCGGTGTTGGGATGCATGCATGGTTGTGGATGGAGGAACTTCCTTTGAGTTTAATGACGGAGCCATTGCTTCAATGTTGATCGAGAAAGAAGACGAGCTTCGAACTGTGCTTCTAGAGCAGTGAAGGATTGCCTCAGATGACAATTTTGATTGCTAGAGAAATAGTTTTACTGCAGAAGCAGCCTACCAGTCATAAAGCTACAGTTTTTGGTTGTTGAGACTGATTGGCCTTGGGCTGAAGGGTGACCAAGAAAGTGAGATTTGCATTATTTTTCTGACGGATTCTGATGGAAAAGATGTTCAGTATGTAAGAAAATGGAGGACTAAACTGATTAGAATTCATAACAGTGAAATTTTGATACTGCTTACAGTTGGTTTCCAAGAGTGCTGGTATCTTTATAAATTTAGAGAGGTAGGCTCAAATAAAAGATTTCATGTTTAGGATTTGAAATTTAACTGTACAAGTTTTTTTTTTTTTTTCCTTCCTTTTCCTCCTCACTTTGTGGAATTGGTCAGACCAAACACATCTCATTTGATTAGTATTTTTTTATAGTACCTAAAGATTAAGGTTTTTTAAAAAACTTTTATGGAGAATTTTGATAAATCCTGATAAATGTGTTTTTGTATATCTGCCAAGAGTTTTCTAATTTCAGAACACAATGATATTGTTATGACTACTGATTTAAAAATTCAATCATTTTTGAAATTATAGATGTTTTCATTTCATTGACTATCAGGTTAATTTTGACAATGCTGGGTGAAATATATAAGGACAAAATCATGGCACTATTACAAATGTATTAATTAGCCAATAATTATTTTAGGTCTTTGGTAATTTTTTTTAATAATTTGAGGCTGATAAAGTTCTTCCATATTTAAAACTCTCTAACGGATTTAAAGACAAAGGATGAACTGATTAGGCACATTCTATTATGAGTTTGGTAAAACCTATAACAATTTTCATCTAGTATTAGGAGTATTGTCAGAAAGAAAATGGATTGTTTAATAAATATGCAAAACATTTTAGTTTTGGAATTGCCTTACTTATTATCATGGTAGTTTTCACCTAGTTCATATTCCAAATTTTACACATTAGGTTTGGAGGATAAAATGTTGTGGCTTTTCTTTTTTTCCCATTATGACAGTTTCTTTACCTAATTCCCAGTTTACTTATAAATAATCCTAGAATTATCACAAAAAGTTCCTCTTGCTGCATCATGAGACAATTGGTATTCTTAGTCCAGTTATTCAAAGTTGTATTTTTTTTCCACTTGCTGTTAAAAATTTGTCTTCAGTCACTGAAATATTTACTGAACACCGACTCTGCCATGCACTGTGTCAGGCGCTGGATGTACATGGTGATCTGAACAGCTGCTGTCCTGATAGAACTGAATTTGGTGAGCTCAGAAGTAGATTCTGCGAAAACTAGGATGTGTAATCAAACCGAGGTTTGGCTCTTGGGTTGGTAACATTTATCATGTTCTTGTCAGATTTTTAAATATTATTATACAAAGATAATCTTAGGTTTTGATGTATATCCAGAACAAGAATTTGTTTTTCTTAGTTGAGAGTAACTGCATAGATGCTACTCGCAAGGAGTTTACATGATGCATACAATAAAAATTGGGTGTTTTCCCAGAGATGGATCTAGTTTCTGATTTGATTTAATAATGATATACTTAAGATACCACTTTATAAAGAAGTGAAATTCCACACTATAGAAACTCCTTAACAGGTTTAAAATACCTTTTTGACAAAAATGCCAACTCCATCTTTAATATCAAAGAAATCTGATTGTCCAAAATGGTACATATATCTGTTTAATATGTAACATATTAATAGGTAACCTGCTATGTAAAATTGTTTATAAGCCATATTTTAGAGGTTTAAAAACTACTTAATGTGTTCCATTTGTGATATAACCTTTAACATTTCTGACCTGTTGTGGGATTTACTTGTAAGAGGTGACGAGAGGGAAAGGTTGTTAGAATAGCAAAAATGTTTTTATGAATGAGTTCCTTTTAATGGCAACTACATGTGAATAAAAGTAAACCATTATCTTTTCTTTTTT EMBV3_36005 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38204 CTACAAGTGTTCTGAGTGCGAGAAGACCTACAGCCGCAAGGAGCACCTGCAGAACCACCA Gene GeneID:527558|ZNF282:XM_002687139:519_cdna Constitutive 0 NULL GeneID:527558 4 GENE ZNF282 NULL zinc finger protein 282 EMBV3_38343 CCTTAGAAAGGGTTTTATGAGAAGATGAAAGCTCTCTGGCCCCCGGCGGTTGGATGAAGG Gene GeneID:100196898|LOC100196898:XM_002696161:107_cdna Constitutive 0 NULL GeneID:100196898 19 GENE LOC100196898 NULL hypothetical LOC100196898 EMBV3_22084 CCTTGCGACTTTCCCCCAAGCTCCCTTTACCTCACCGTAGCAACAGCTACCTTAGCCTCT Gene BVT0102_147781 + 1 EMBV3_42770 GK000003.2:104402293-104477698 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21566 GAAACAATATTTCCCAGTGTTAGTTGCATCCCTGCTTTGTCCCGCCGAATATGCACTGCA Gene BVT0101_035419 + 0 NULL GK000005.2:93757646-93893535 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192827 TCONS_00192832 TCONS_00192829 TCONS_00192823 TCONS_00192825 TCONS_00192830 TCONS_00192834 TCONS_00192826 TCONS_00192833 TCONS_00192831 1 XLOC_117286 Coding TCONS_00192827 XLOC_117286 Coding Coding LMO3 5:93693998-93759946 j TSS144219 3995 1 TCONS_00192827_2 145 0.0195244055068836 4 0.939481705005535 0.00282034751279623 0.00229974747263524 0.00298925545566769 0.00266149166788216 0.00329095856310974 0.00193027757096563 0.00195886902234361 0.00342785484019421 0.00336454799283867 0.000118555071372567 6.37927540938967e-06 0.000102218140307483 0.000272588840295217 0.000889794395900596 0.00122638518927318 0 0 0 0.00191367414551939 0.00236354517309145 0.00084924541976941 0 0 0 0.00146566001999518 0.00114185044819243 0.00155989423115868 3.83973802969594e-11 2.28449696107203e-16 2.60206676242752e-05 XM_005206982.1 LMO3 PREDICTED: Bos taurus LIM domain only 3 (rhombotin-like 2) (LMO3), 0.0 5842 99.94 0.812265331664581 NM_018640.4 LMO3 Homo sapiens LIM domain only 3 (rhombotin-like 2) (LMO3), 0.0 3847 86.59 0.812265331664581 TCONS_00192827_2 sp|Q2KIA3|LMO3_BOVIN LMO3_BOVIN LIM domain only protein 3; 2e-104 299 100.00 0.993103448275862 1 coding 0 0 0 0 -1.16660606184422 0.0109799902600411 -0.0577487723651396 0.463835069660387 GTAAGGGGGAGCTTTGGTGAGAGAGAGATACTTTGATATTTTGGAATGTTAGAAGGGTGAATGTGAAAAATTGGAGGTTGGGGATCTAATTACCCAACCATAATTGGGGGCTAGGGAATAAGTTGCAGTCCTCTCAACTCACCGCAGATCAATTATGTTAAGAGAACATCTGTAAGTAGAACTTAATGAGGTCCATTAGAGCAACATGTACAGCCTCCTCTAACAGTACTTGTCAGCTTCTTGGATGAGCTGAAGGAAGCTGCTAACTAGGGACCTGGCGAGGTGTTTAAATACTGGAGGAGCCGCGCTGGCCCAGTCAGGTTTTGTATGCAGTTCGGGAAGAAAGTGGGAAAGAGAGAGAAGCACCTAAGAAAGACAGGAAGGCAGAGGCTTCTTGTCATTTGTGTGGCTGAATTTCGAAGAGCGATGGTCGGAGTGTGTGTGGTGGGGGTATTAGCCATTCCATCCTTCCCTTGACTGAGACCTTGTACGACACCTGGACCTTCAGGGTGGGTTCTCCTTGGCCTCCTCCCCCCTCACAACCTGTCTGCTGCCCTTTAAAAAAAAGAGAGAGAGACGGCAATACAACACAAACATCTTTGGGACGCCACAGCAATCGTTATTGAACACCTGAACACAAAAGTAATCTGTGAGGTGTGTTTTAAAGAAAGAGACAAGCTGAAAACTTGAAGACGTATTTAGAAATAGAGATACAAATAGATATACTATTTTCTGGTGGGAGATCTCCTTTGAGCCAAGGTATACAAATGCTCTCAGTCCAGCCAGACACCAAGCCGAAAGGTTGTGCTGGCTGCAACCGAAAGATCAAGGACCGGTATCTGCTAAAGGCATTGGACAAATACTGGCATGAGGACTGCCTGAAGTGTGCCTGCTGTGACTGCCGTTTGGGAGAAGTGGGTTCTACCCTGTACACAAAAGCTAACCTTATCCTTTGTCGCAGAGACTATCTGAGGCTCTTCGGAGTAACAGGAAACTGTGCTGCTTGTAGTAAGCTCATCCCTGCCTTTGAGATGGTGATGCGCGCTAAGGACAATGTTTACCACCTCGACTGCTTTGCATGTCAGCTTTGTAATCAGAGATTTTGTGTTGGAGATAAATTTTTCCTAAAGAATAACATGATCCTTTGCCAGACGGACTACGAGGAAGGTTTAATGAAAGAAGGTTATGCACCCCAGGTTCGCTGATCTATCAACATCACCCCATTAAGAATACAAAGCACTACATTCTTTTATCTTTTTTTTGCTCCACGTGTATATACGAATTGACACGGGAACCAACTGAATAGCGTAGATATAGGAAAGCAGGATGGTTATGGAATAAAAGGCGGACTGCATCTGTATGTAGTGAAATTGCCCCAGTTCAGAGTTGAATGTTTATTATTAAAGAAAAAAGTAATGTACATATTGCTGGATTTTTTTGCTTGCTATTCGTTTTTTTGTGTCACTTGGCATGAGATGTTTATTTTGGACTATTGTATATAATGTATTGTAATATTTGAAGCACAAATGTAATACAGTTTTATTGTGTTACCATTTGTGTTCTGTTTGCTTCTTTGTATTGTTGCATTTAGTACAATCAGTGTTTAAACTTACTGTATATTTATGCTTTCTGTATCTACCAGCTATTTTAAATGAGCTGTAACTTTCTAGTAAAGAACTGAAGATCAAATCTCACTAATGATACGTATAGATTAAACACGTCTATCATCATTAAAAATACAGAAAAAGAAAGACACACAAAGCATTTTAGCAACATCCACTATTATTGCCGCTATGATTTAGAGTCTTTATCAGTGTTCTCATTTATAACCCCCTATTTTCAGGGGGTTAAAGATCAGCTTTAAAATAATGCATAAGAATTTCATCTTAAAGCACTTTCATTTTTTACCAACGTGAAAAGTGCCATTTTTAGAATAACTTTAAAGCTTAACAGTTTTCCTTTTAATATCCTTTTTTGTGCTCTTTACCTAGTCAATGGCTTTGTTTTGTTTCCTTCAGCGCCATTCACCCCTATGTGAACTAGTGCCTTTGGGTATCATTTAAAAATTTTCCAAAGGGTTACTTTTAAAAAGTGTTACTGCAATTATGAGATAATCTTAAAATGATAAATTTCTTGTGCAAATTTTGCCCAGACCTCTCCATAAGAGCTAAGGGTATAATAACATTATGGCTTGAAACATTTCTGGCACTAAAAGGTTTTGAGTGTGAATCTAGTGAAATCATGATAGTGCACAGTGAAGCTATGATGATATTTGAGGAGTGAAGTCACTTTTGATCAGAGCAACATAGTGCTCACAGAATCTTCTAGAAGAAGAGAAACAAAGGGATTGATAAAAAGCTGAGAACTGGTGATTATATATTTTTCTGTATTTACCTGCCACTTATTTTAATGTTCCAAAGTGAACACTTTCAAAGTTTGATGTGTCTTACTCTTCATTGCTTTCTCTAAGTAATTACCATTCAGAATTGATCACACTTAGGCTGAAATCTGTCATTCCATTTTTGAAAGGTGAAAAATTATTCCCTTACCTACATGATAGCTGATAAAGAAGAACGCTTTCTAGAAAGAAAAATTATGGAGACTGATTATTTAAATTACAATTAAGGAAATAAAGATGAGACTGTGTTCCCTTCTTCTGGGTTGTTCACACTTTGCTTCTTTGCTTCTGCTCCCTGTATTCAAACTATTCAACAGACCTAATTCCACAACAGGCACAATGAAGCATATTTTACTAGAGCAAATTTTAGTTCTGTGGGCTTTCTCTTTTTTTATATATATATTGATCACTTGTATAGGAAACAATATTTCCCAGTGTTAGTTGCATCCCTGCTTTGTCCTGCCGAATATGCACTGCAGATGAAAATTAAATGTGATACCTGAATTCTTGATTTGGGGCCAAAATATTAAACTGAAAATAACTCTGGTGTGGATTTGAGTTGTTTTAAAACAAAGCTTTACTACGAACATGCGTGTGGATCTGGATATTGCCTCTCATTTTTAGGAAGATGGTTATGTGAAAAGTGAACGGTATGTATTTTTACAAAGGATTCATGGTTAAGAGTGTTCAAGTCATGTGTCTTCCAAATTTGAGATATACCCCAGAGATATTTCAAGAATAGCAGTATGCGGTCCACAAAATTATTATTTTAGCCTTAGAAACTTACATTTGTTTCATGGAAAGACTTGCATAGCCAAAACCAAAAAAACAAAACTGAACAAATGGGAGGAAGGTGGGGGAAATATGTGACAAGTGGTTTTACTAAAGCAGCCCTCCTAGTCCCCATTAAGAGTTGTTTGAAATTCATGTGAATGTAAAATTCGAATTGTCAGTATCTTTTTGCAAATGATCTTTTTTATATTTAAATGATTTTGCATATGTTTATCAATATGTCAAAATACTTGTAAATTGGGAACAAACTTCTCTCAGCTTCTTGACGCTGTTCCTTTATTCCTGCCACCCAAAGACCAAACAAGGTTTTTACTGCCTTTTCTTTTGCTTAATCCTTTGGGAATTCATTCTTATGCTTTTTCTATAAACAAAATGACTCACCTGGATTAAAGATTAAGGCCTTAATCTCTTTAGATTATCTTTAATCTCCATAAGATGGTGGAACAAGATAGAAATAGGCCATCTGACAGCTAATTGCCTGAAAATAGTAGCATTTTTGACCTGAAGTACTAAGCTTATTGTCTTGACTCCTCAGAGTCCCTGAACTGTTGTCAACTTTCCTCTTTGTGTTGTGTAACCCTGACGTCATTTAGCTTATTGTCTGAAGGCTCCAGTAAGACACCTCCGATGGAGTTTGGTTTCCTCAAGCAGCGGAAGCTGCCTACCTGCATCTCGTGTAGGCTGACTGTGATGAAGGACCAAGCTCCTCCACCCACCAGAGTGCTGGCTGAGTTGAAAAGCTGACCTGTGTTTGTAATTTCACTTCCATCTTGCTTAATAAATATCTGCTGGCTTCTTTCATTCA EMBV3_26012 ACACACTGTCCAGACATGCAACGACCGAGCTGGACCCATTCACTCACTGTCACTGGCTCT Gene GeneID:100336656|LOC100336656:XM_002699379:334_cdna Constitutive 0 NULL GeneID:100336656 29 GENE LOC100336656 NULL fermitin family homolog 3-like EMBV3_23902 GTCCAAACTGGGTCTTCGACAGGTTACAGGGGTTACTAGAGTCACTATCCGGAAATCTAA Gene GeneID:513312|NACA:NM_001014916:1010_cdna Constitutive 0 NULL GeneID:513312 5 GENE NACA NULL nascent polypeptide-associated complex alpha subunit EMBV3_05536 CCATGATTCTAGCAGAGCGACAGAAAAACGGAGATCCTAGCACGGAGGAGCCCATGCTCA Gene GeneID:618357|MRPS34:NM_001035500:294_cdna Constitutive 1 NULL GeneID:618357 25 GENE MRPS34 MGC127369 mitochondrial ribosomal protein S34 EMBV3_18391 GCTTCAAATTAAAATAGCTACAGTAGAAAAAGAGGCGCTTTCCCCCTCCCCCTGACACCT Gene GeneID:534712|RB1:NM_001076907:157_cdna UTR3_Alt 2 NULL GeneID:534712 12 GENE RB1 P105-RB PP110 RB11 retinoblastoma 1 EMBV3_37914 ACCTGTCACTTTGTTGTTCTTACCTCTCAACATTGTATTTCAAAGACTGTCCCCCAAAGC Gene BVT0102_102268 + 0 NULL GK000020.2:67147400-67788678 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36270 GACATGCTTGACCAAAAATTTTCAGAGGAAAATATGTACCTGGTCCCTAATGAAGCTGCA Gene GeneID:534262|USP38:NM_001102167:41_cdna Constitutive 2 NULL GeneID:534262 17 GENE USP38 MGC139596 ubiquitin specific peptidase 38 EMBV3_27224 AGCCCCTACAGAAGTAGAGGTGATGGATGAAACCAACTGCCAGAAAGTGTTGAACATGTG Gene GeneID:407190|CSNK1G3:NM_001105329:5_cdna UTR3_Alt 2 NULL GeneID:407190 7 GENE CSNK1G3 MGC127453 casein kinase 1, gamma 3 EMBV3_07424 TCCACCTGTGGCCAGACTTGTGTATGGTTTCTCTTTCTACTCCAACACAGATGCCCAAGC Gene GeneID:534394|NIP30:NM_001014944:357_cdna Constitutive 0 NULL GeneID:534394 18 GENE NIP30 NULL NEFA-interacting nuclear protein NIP30 EMBV3_13514 TGTTACACTGGGTTTCCGTTACAAGATGAGGTCGGTGTATGCCCACTTCCCCATCAACGT Gene GeneID:282884|RPL9:NM_001024469:11_cdna Constitutive 0 NULL GeneID:282884 6 GENE RPL9 NULL ribosomal protein L9 EMBV3_16541 GGTTGCCCACAGCCTTGTAACAGTAGAAAGCAAAGTTCTTAAGATGTATGAGGTGCAGTG Gene BVT0102_014047 - 1 EMBV3_28499 GK000011.2:69321397-69592077 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35303 AAGATGAATGCCATGCTTGCCCACCTGTAGAGGGAGAGGGCCAAAAGCCTGAGCCCATAG Gene BVT0102_412455 - 1 EMBV3_11658 GK000007.2:44803594-44816939 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15470 CCTGGAAAATCCACAGGGGCTGGAGCATGTTGTCGGTCTGGTTTTCTGATTGGTCCCATT Gene GeneID:534731|EPHB1:XM_002685083:235_cdna Constitutive 0 NULL GeneID:534731 1 GENE EPHB1 NULL EPH receptor B1 EMBV3_03309 CTTTATTCATCCATTTGTAAATTTTTTAAGGTTCTTGTGTATATTTGGGGGTGGGGGTGG Gene GeneID:540170|PUM2:XM_002691516:522_cdna Constitutive 1 NULL GeneID:540170 11 GENE PUM2 KIAA0235 pumilio homolog 2 (Drosophila) EMBV3_40329 TTGATCTTGTTGATTATGAAGAAGTGTTAGGAAAACTTGGAATCTATGATGCTGATGGTG Variant GeneID:286771|ASPH:NM_174757:15_cdna 451^495 1 EMBV3_15530 GeneID:286771 14 GENE ASPH MGC137539 aspartate beta-hydroxylase EMBV3_26819 CTTCATCTCAACAGCCACCTCCTTGCCAAAATAAGCCAGAAAAGGTATGAGGGTGCCTGC Gene BVV0102_246149 + 1 EMBV3_33876 GK000002.2:72592435-72977074 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20237 TCCTGTGGCTACAAGGCAAGTAACGGGTTGGAAAAAGTCTGACTGTAAGCGTTGGACACC Gene GeneID:539432|EPC2:XM_002685364:259_cdna UTR3_Alt 2 NULL GeneID:539432 2 GENE EPC2 NULL enhancer of polycomb homolog 2 (Drosophila) EMBV3_22007 TGACATGAGCTTTTCACTGCCACCTGCTGCCTGACCTTATATTAAAATTCACCATGTCCC Gene BVT0102_081227 + 1 EMBV3_32903 GK000018.2:48594086-48633597 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43651 CCAGTAAGGGACAAACCCGTCTCTGAGGGCAGGACGAGAGAAAACCTCAATAGGTGGAAA Gene GeneID:100295298|LOC100295298:XM_002685287:86_cdna Constitutive 0 NULL GeneID:100295298 2 GENE LOC100295298 NULL hypothetical protein LOC100295298 EMBV3_20320 GAGAGCTGCGAGGTGGCCCTGGACATGTACGAGTATGAGACGGGGTCGACCTTCCAATAT Gene GeneID:526521|DOHH:NM_001075886:42_cdna Constitutive 0 NULL GeneID:526521 7 GENE DOHH NULL deoxyhypusine hydroxylase/monooxygenase EMBV3_12655 GAGAACATGCGTGCGTCAAGGATGAGGTGGCATTTTTACGTGCAGCGACCCTTGGTGTTT Gene BVV0102_061153 + 0 NULL GK000023.2:16755479-16759131 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132550 TCONS_00132553 TCONS_00132551 1 XLOC_080809 Coding TCONS_00132550 XLOC_080809 Coding Coding SRF 23:16747768-16757084 = TSS99139 4424 1 TCONS_00132550_2 509 7 0.525818572195384 7.14248753887646e-11 1.27413566807207e-11 4.08147648880719e-11 4.66723438803451e-11 2.4197113821938e-11 2.4409780045211e-11 2.59634657599112e-11 2.57862135859152e-11 2.14967107903057e-05 0.000901907492005058 0.000134380393454996 7.37628131159065e-07 2.29354665476284e-12 4.92680127219534e-05 6.41176312220687e-05 0.0111642795013085 0.00780574220777329 0.000820026131002554 3.90366179165747e-06 9.12756968353382e-06 3.1420848450663e-05 0.00504628637797871 0.00306297570367402 0.00405436487083229 1.99003080549803e-08 2.54602389349528e-11 1.27509836029578e-05 0.00168753109251632 0.000910770151491591 0.0021151773653895 NM_001206016.1 SRF Bos taurus serum response factor (c-fos serum response element-binding transcription factor) (SRF), mRNA. 0.0 4742 100.00 0.594032549728752 NM_003131.2 SRF Homo sapiens serum response factor (c-fos serum response element-binding transcription factor) (SRF), mRNA. 0.0 5616 90.87 0.915913200723327 TCONS_00132550_2 sp|P11831|SRF_HUMAN SRF_HUMAN Serum response factor; 0.0 807 97.64 0.99803536345776 1 coding 0 0 0 0 -0.0123407105741393 0.922728484676805 0.00161683806618571 0.978947169378889 GGGGCAGGAAAGTGAGGGCCCAGGTCGGCCCGGGCGTGCAGGGGCCCCGGGTTCGCAGCGGTAACGGCGGCAGCGATAGCGGCATTAGCAGCAGCGGGAGCACCGGGTTGAACCGGGAAGCCGATGGCGGCGGCGGCGGCGGCTCCGATTCCTCGCTGACTGCCCGTCCGCCCTCCTGCATTGAGCGCCATGTTACCGAGCCAAGCTGGGGCCGCGGCGGCGCTGGGCCGGGGCTCAGCCCTGGGGGGCAGCCTGAACCGGACGCCGACGGGGCGGCCGGGCGGTGGAGGCGGCGGGACTCGAGGGGCTAACGGGGGCCGGGTCCCCGGGAACGGCGCGGGGCTCGGGCCGGGCCGCCTTGAGCGGGAGGCTGCAGCAGCAGCGACAACCACCCCGGCGCCCACCGCAGGGGCCCTCTACAGCGGCAGCGAGGGTGACTCGGAGTCGGGCGAAGAGGAGGAGCTGGGCGCCGAGCGGCGCGGCCTGAAGCGGAGCCTGAGCGAGATGGAGCTCGGTGTGGTGGTCGGTGGGCCCGAGGCGGCGGCGGCGGCCACGGGGGGCTACGGGCCGGTGAGCGGCGCGGTGAGCGGGGCCAAGCCGGGTAAGAAGACTCGGGGCCGCGTGAAGATCAAGATGGAGTTCATCGACAACAAGCTGCGGCGCTACACGACCTTCAGCAAGAGGAAGACGGGCATCATGAAGAAGGCCTATGAGCTGTCCACGCTGACAGGGACACAGGTGCTGTTGCTGGTGGCCAGTGAGACAGGCCATGTGTATACCTTTGCCACCCGCAAACTGCAGCCCATGATCACCAGTGAGACTGGCAAGGCACTGATTCAGACCTGCCTCAACTCGCCAGACTCTCCACCCCGCTCAGACCCCACCACAGACCAGAGAATGAGTGCCACCGGCTTTGAAGAGACAGACCTCACCTACCAGGTGTCGGAGTCCGACAGCAGTGGGGAGACCAAGGATACACTGAAGCCGGCGTTTACCGTCACCAACCTGCCGGGTACCACCTCCACCATCCAGACAGCACCCAGCACCTCTACCACCATGCAAGTCAGCAGCGGCCCCTCCTTTCCCATCACAAACTACCTGGCACCAGTGTCTGCTAGCGTCAGCCCCAGCGCTGTCAGCAGTGCCAACGGGACTGTGCTGAAGAGTACGGGCAGTGGCCCCGTTTCCTCCGGAGGCCTCATGCAGCTGCCTACCAGCTTCACCCTCATGCCCGGTGGGGCAGTGGCCCAGCAGGTCCCAGTGCAGGCCATTCAGGTGCACCAGGCCCCACAGCAAGCGTCTCCCTCTCGCGACAGCAGCACAGACCTCACGCAGACCTCCTCCAGCGGGACAGTGACGTTGCCTGCCACCATCATGACGTCATCTGTGCCCACAACTGTGGGCGGCCACATGATGTACCCCAGCCCCCATGCGGTGATGTATGCGCCCACCTCGGGCCTGGCTGATGGCAGCCTCACTGTGCTCAATGCCTTCTCCCAGGCGCCATCCACCATGCAGGTGTCCCACAGCCAGGTCCAGGAGCAAGGTGGCGTCCCCCAGGTGTTCCTCACAGCACCATCTGGGACAGTGCAGATCCCAGTTTCTGCAGTTCAGCTTCACCAGATGGCTGTGATAGGGCAGCAGGCCGGGAGCAGCAGCAACCTCACCGAATTACAGGTGGTGAACCTGGATGCCGCCCACAGCACCAAGAGTGACTGATCCGCCCTGCCGCCCTGGACAGATGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTCACGTTTTCTTTACACACATGTTGACGGGCCGCAGGAGGGAGGCGGGGAGGAGCGTGGGCAGCCACAGGACTGAGCCCTCTCACTCCAGCCAAAGAAATGGGCCAGCCTGCCCTCCACCCCGGCCTCCCGCCCCCTTCCCCCCTCTAGCTCCGCCTCCCATTTTGTTGCCGGTGGGGCTGCCCTCCCTCCTCAGGCTCCCCTTGCCAGCTTGGCTCCATGTTTGCCATGAGTATTAGCTTACCCGATGGGACCGTGCCCCCACCACCATCACACACAGGTCTCTGTGGGACTAGGCACTGTGTCCCCCTGAGGAAGCAGCGGGGTGGAGGGCCTCTCCCCAGTCTCCTTGCTGACCCCATGTCAGCACTGTGTCTGCCACAGGCTGGGTCAAAAGAGCCCACCCCCTGACCCTCAGGGAGCCAGCTGGGGAGATGGGGCTTCTTCCCTCAAGCCGTGCCCGTGGCCCCTACAGCTCCTGAGCAGCGGGGCCTGTGCTCCAGCACAGCAGATTCCCAGGGCGTCCTGCCCTGCCCTGCCCTGCCCTGCCCTGCCGCTCCCTTTGGAACTCCAGGGGCTGCTGGCTTGGAGGGAACCACCCGTGTTCCCCTGTCTTCCCCCCTCTCCTCCCAGCTGCTTTACTTAAAGTTGATTTTGAACTTTTTATTTGAGGAGACGAAGTGAAAACAAATCTATAAATATATATTTTTAAAATATTTAACTTTTTTTTATGGCGTTTTTCTCGTCCCCCTCCCTGCCCAAGCTCCCCTTCCCTGGGGAGCCCTGAGGCTCCCCGGAACTGGCTGGGCCTCTGGGGACAGAGCCACCCCATGAGCTTGGGGCTCGCCAGTGTGGGGGGGGAGATTGCCCGGTCCTGGGTTGTTTCCAGGAGAAAACCGGGGGAGGGGCCCTCAGGCCATGCCCCAACGGGGTGGGGAGGGTGACCCACAGCTCTGGGCCTCTTTTTGCCCTTCAGAGCTGTTGCTAGGGAGAGGGAAGAGGGAGACCAAATGTGGGTGGGGGGTGGGAGGGTGTCAGAGGCAACTGACTTCATTTGTGCCACACGCATGGGCATTGCAGCCTTGCGCGCCCCCAGGCCTGCAGCTGCCTGGGGCCCAAGTTGCAGTGAGCAGGGTGGGGTCTGGGAGGGGGCGAGAGGCAGGATTGGGGGGCAGAAGAAATGGGAGCAGCTCTTGGGCTGAGTGTGGGATTAGGGGAGCCAGAAATGGCAGCTCTCCCAGGGAGTGAGCAGCTACTGTAACTTTTTAAAATTAAGACAAAAAGCCTTGAAGAAAATGACTTTATTTTTCTAAGTGTAACCTCAGTATTTATGTAATTTGTACAGGGGCCGTGCCCCACCCCCTCTGCCCCCTTTGGGGTAGATCTTGAGGGTGGGCCAACATAGGGGGAGGGTCTTTTACCCTGTGTCAGAGCCTACCTTCACCACCTGTATCAGAGAGGGAGCTTTTTCAAAACAGGGCAGTGGGGGGTGGGTGGAGTTTTATTAACCCCTTAGGTCTGCCTTGAGTAGGAACAAGCCTGCTTCTGTGATGAGGTGAAGGGGTGGGGGAAGTTTATACACACAGCCTAATTATCATGGGGATGATTTGCCAACATGTTTGAAAACCTCCGGACCTCTAACCCCCTTTGCTGTCTTGCCCCAGTTTGGGGTGCCAAGATGGAAGCCATCTTTCTGGCTTTCTCCAGAAGATAGCAGGGGACTTATGGGTGGCTTATAGATTGGGACATGGCAAATCAGGGGTCAGAGAGTGGGGGAGCTTGGGACTCAGGTCTGCAACTGCCCAGCCCCTTTTCTCTACTCTTTGTTTTCACTCCACCATCACTCACTCACTCCCCTCTCCCTCACGCTGGGGAGGAGACCTTGATGAATTCCTCCTCTCCTTCCCACAAAAGACAGACCCAGTGAGTGAATCAGGCAAAGTGCTTATAATGTGTGTTGTGTGAGCGTGGCCTTGGGAGAACATGCGTGCGTCAAGGATGAGGTGGCATTTTTACGTGCAGCGACCCTTGGTGTTTCCCTTCCTTGGTGGCTCTGGGGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGTGCCCGAGTGAATGTGTGTGTGCGAATGTGGGGTGTGTATGTTAGTGGTTTCTACTTCCCCTGGGATGCTGACCCAGGAATAGTGGACATGGTCACAGTCCTATGTACAGAGCTTTCTTTTGTATTAAGAAAAAAATACTCTTTCAATAAATGTATCATTTTTGTGCACAGACTGTGGGGTCTTTGCTTTTGTTTTCCCATATTGGAGCGGGGGAGGTATGAACACAGACGTGCTGAGAAACAAGCGTCTTGTTTCATGAAACGCATGGGTGCTTTGGGCTGTTGAACTCTACTGATTTGAGTTAAGGAACACATCGGGGGTGATGGTTAGGGCCTTTATCTTCAGCCCCAGCTGTGCTAGGTGCTTAGGTCAACACAGAGAGAAGCAATTTTAATTAATAGGAAAAAGAACGCAACCAATCCAAAGCCTCGGGTATGGGAAACTCATGGCCACGTGACCTAGAGCAAACTAAGAGGACAGCCCTAGGATGTGAGTGTGCGTTTCGGTGGGAGACGAAGGCAGATCCAGTAAAGGGCAAGGAG EMBV3_34439 TTCAACTCATTCGGGGGGACGCGAACTCTCTCTTGACGCATAATGTCAACGTGGATGAAG Gene GeneID:505052|LOC505052:XM_002700468:22_cdna Constitutive 0 NULL GeneID:505052 X GENE LOC505052 NULL similar to odorant binding protein EMBV3_23693 CATGAATAACTAGGATTAACCCCTTCCCCTCCTCGCTGGCTGGTTCAGTGTGCTCTGACT Gene GeneID:534427|EGFLAM:NM_001083478:51_cdna Constitutive 0 NULL GeneID:534427 20 GENE EGFLAM MGC155116 EGF-like, fibronectin type III and laminin G domains EMBV3_16032 CAAGGCCAGCGGTGCCTTCACAGGACCCATCCTATGATGTGTCGTTTTCAGATTCTCCAT Gene GeneID:521662|ZNF200:NM_001083700:207_cdna Constitutive 0 NULL GeneID:521662 25 GENE ZNF200 MGC140199 zinc finger protein 200 EMBV3_42145 GCCATGGAGAAAGAGTCTGAGTTCCTTGATGAGGCGAAAGGAAAAACCCAGAAGAGAGGC Gene GeneID:509602|ERCC5:NM_001035276:5_cdna Constitutive 0 NULL GeneID:509602 12 GENE ERCC5 MGC127735 excision repair cross-complementing rodent repair deficiency, complementation group 5 EMBV3_41430 ACGACTTCTTACCCACACTCATCTACATTGTCTTGAAGGGCAACCCCCCACGCCTTCAGT Gene GeneID:282335|RABGEF1:NM_174591:221_cdna Constitutive 1 NULL GeneID:282335 25 GENE RABGEF1 MGC128930 RABEX5 RAB guanine nucleotide exchange factor (GEF) 1 EMBV3_33405 TAGAAAGGTGCCTCCCCCACTGTCTGGGAGATCCAGGCCTCTTCAGGGCCAGTGGCAGCA Gene BVV0102_296820 + 0 NULL GK000025.2:27489664-27522344 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146748 1 XLOC_089197 Coding TCONS_00146748 XLOC_089197 Coding Coding LOC100847781 25:27492855-27501201 = TSS109646 2568 1 TCONS_00146748_3 855 15 0.694068304373877 0 3.91294565415729e-06 0 0 0 2.78586586093114e-06 0 0 0 1.92265783343744e-05 8.91427414811334e-07 0 1.11732278101245e-05 0 2.65059354610626e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 1.89042389316615e-06 2.34122058475954e-06 XM_003587835.2 PRSS36 PREDICTED: Bos taurus protease, serine, 36 (PRSS36), mRNA. 0.0 4632 100.00 0.999610591900312 NM_173502.4 PRSS36 Homo sapiens protease, serine, 36 (PRSS36), transcript variant 1, 0.0 3151 87.32 0.999610591900312 TCONS_00146748_3 sp|Q5K4E3|POLS2_HUMAN POLS2_HUMAN Polyserase-2; 0.0 1420 85.95 0.99766081871345 2 coding 0 0 0 0 -0.0588264202281375 0.725071610920265 0.0456238030673956 0.445527600694332 ATGTCCCAGCACCTGCTTCTCCCGCTTGTGATCCTTGCCATCAGCCCCATCCCGGAAGCCTTCCAGGACTCAGCTCTCAGTCCTACTCAAGAAGAACCTGAAGATCTGGACTGCGGTCGCCCCAAGCCCTCTGCCCGAATCGTGGGGGGCTCCGACTCTCAGCCGGGCACCTGGCCGTGGCAGGTGAGCCTGCATCATGGCGGGGGCCACATCTGCGGGGGCTCCCTCATCGCCCCTTCCTGGGTCCTCTCGGCTGCTCACTGTTTCGTGACGAACGGGACCTTGGAGCCCGCGGCCGAGTGGTCGGTGGTACTGGGCGTGCACTCGCAGGACGGGCCCCTGGACGGCGCGCACGTCCGCGCGGTGGCCGCCATCCTGGTGCCGGACAACTACAGCAGCGTGGAACGGGGCGCCGACGTGGCCCTGCTGCGCCTGGCCTCGCCCGCCAGGTTGGGCCCCTCCGTGCGGCCCGTCTGCCTGCCCCGAGCCTCGCACCGCTTTGCTCAGGGCACCGCCTGCTGGGCCACCGGCTGGGGGGACGTCCAGGAGGAGGACCCCCTGCCTCTCCCCTGGGTGCTACAAGAAGTAGAGCTGAGGTTGCTGGGAGAGGCTGCCTGTCAGTGTCTCTACAGCCGCCCTGGCCCCTTCAATCTCACTTTCCAGCTATTGCCGGGGATGCTATGTGCCGGCTACCGGGAAGGCCGCAGGGACACCTGCCAGGGAGACTCTGGGGGACCCCTGGTCTGCAAGGAAGGTGGTCGATGGTTCCAGGCAGGAATCACCAGCTTTGGCTTTGGCTGTGGACGGAGGAACCGCCCCGGAGTCTTCACTGCTGTGGCTCCCTATGAGGCATGGATAAGGGAACAGGTGTCAGGCTCAGAGCCTGGGCCTGCCTTCCCCACCCAGTCCCCGGAGGCCCAGTCAGGCCTCCCCGAGCCCATGAATGAGAATTGCACCATTGCCCTGCCAGAGTGTGGAAGAGCCCCAAGGCCAGGGGCCTGGCCCTGGGAAGCCCAGGTGATGGTCCCAGGATCCAGACCCTGCTATGGGGCACTGGTGTCTGAAAGCTGGGTCTTGGCACCTGCCAGTTGCTTTCCAGGTCACATCAGCTCAGCGCGCCCGCCCAGCGACCTGGACTACTGGCGCGTGCAACTGCCCTCGCGCCCGCGCGCGGAGCAGGTGGCGCGCCTCGTGCCGCACGAGAACGCCTCGTGGGACGACGCCTCGAACCTGGCGCTGCTGCAGCTGCGTGCGCCCGTGAACCTGAGCGCGGCCCCGCGGCCAGTGTGTCTACCCCACCCAGAACACTATTTCCTGCCAGGGAGCCGCTGCCGCCTGGCTCGCTGGGGCCGCGGGGAACCCGCGCCCGGAGCCAGCTCGCTGCTTGAGGCGGAGCTGTTGAGCGCCTGGTGGTGTCACTGCCTGTACGGCCGCCAGGGGGCGTCAGTGCCGCCGCCAGGAGAGCCTCCGCAGGCGCTCTGCCCCGCCTACCAGGAGGAGGAGGCGGAGGGGAGCTGCTGGAACTACTCTCATTGGAGCCTGCTGTGCCGGGAAGAGGGGACCTGGTTCTTGGCTGGAATCAGAGACTTGCCCAGTGACTGCCTGCGTCCCAGAGTTTTCTACCCACTGCAGACCCACGGTCCATGGATCAGCCATGTGACTCGGGGGGCCTACCTGGAGGATCAGCTGGCCTGGGACTGGGGACCTGAGGGGGAGGAGACTGAGGCACAAACCTGTCCCCCTCACACAGAGAATGGTGCCTGTGGCTTGCAGCCAGAGCCGGCTCCGATGGGGGTCCTGTGGCCCTGGCTGGCAGAGGTGCATGTAGCCGGAGAGCGAGTCTGCGCTGGCGTCCTCGTGGCCCCAGGCTGGGTCCTGGCAGCCACTCACTGTGTCCTCAGGCCGGGCTCTACAACGGTGCCTTATATTGAAGTGTACCTGGGCCGGGCGGGGGCCAGCCCCCTCCCCCAGAGCCACCAGGTGTCCCGGTTGGTCATCAGCATCCACTTGCCCCGGCATCTGGGACTGCGGCCCCCCCTGGCCCTCCTGGAGCTGAGCTCCCGAGTGGAGCCCTCCCCATCGGCCTTGCCCATCTGCCTTCACCCTGGGGGTACCCCCCTGGGGGCCAGTTGCTGGGTACTGGGCTGGAAGGACCCCCAGGATAGAGTCCCTGTGGCTGCTGCTGTCTCCATCTTGACTCCACGACTCTGTCACTGCCTCTATCAAGGCCTTCTGCCTCCTGGAACTCTGTGTGTCCTGTATGCAGAGGGGCAAGAGGACAGGTGTGAGGTGACCTCAGCCCCTCCGCTCCTGTGCCAGACTGAGGGAGGCTCCTGGGTCCTCGTGGGCATGGCTGTTCGAGGCAGCCGGGAGCTGTTTGCTGCCACTGGCCCTGAAGAGGCCTGGATCTCCCAGACAGTGGGGGAGGCACCTTTTCTACCCCCCAGCGGCTTCCCCCACTGGCTCCCTGAAGGCAGCGACCTCTGTCCCCCTGACATGGCCAGGGCCTCAGGTTCCCCGCGGGCTGCTCTTTTCCTGCTGCTTCTGACCCCCCTGATCCAGGGCTGA EMBV3_16888 GGAAGGAACCATCCTAGTGCCAGCCCAAACCAACAACTGAAGAAAAGAAGACTGGCAGGA Gene BVT0102_238176 + 0 NULL GK000030.2:7490025-7586358 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26160 GAGCATGGACTGCATCAAAGCCTTCAGGGAAGAAGCCATTCAGTTTTCAGAAGAGCAGCG Gene GeneID:531945|XRCC5:NM_001102141:22_cdna Constitutive 0 NULL GeneID:531945 2 GENE XRCC5 MGC179425 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) EMBV3_29082 TTCTCCCGTTCACTGTGTGCGAACGAGCTCCCTCACCAACTGTGTCCTTGTTCGAAATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06854 CGCAGCCTACCGCCAGACTGATGTCCAGGTGACTAAGTTCAAGGCTCCACAGTATACCAT Gene GeneID:509757|ODF3:NM_001080252:2_cdna Constitutive 0 NULL GeneID:509757 11 GENE ODF3 MGC134306 outer dense fiber of sperm tails 3 EMBV3_22463 AAGGAAGACAACAGGACGCGCAGCGCCCAAGACGACATCTTTACACAGGCCGTGAATATG Gene GeneID:532822|QRSL1:NM_001046336:3_cdna UTR3_Alt 2 NULL GeneID:532822 9 GENE QRSL1 MGC137680 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 EMBV3_29005 CCCTCTACCCCTGAAAAAAGCAGAAGGATGAGTTCCAAGCTGAAGAGGATTGAGTGTGTG Gene BVV0102_323873 + 1 EMBV3_29862 GK000017.2:68316120-68354332 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076081 TCONS_00076086 1 XLOC_046727 Coding TCONS_00076086 XLOC_046727 Coding Coding SEZ6L 17:68248656-68318840 = TSS57195 6330 1 TCONS_00076086_5 1023 0.0105845181674566 17 0.910049442172606 2.48366368323346e-05 1.41641616494925e-96 3.78926971929972e-08 5.37600298306748e-47 1.03607411583117e-06 5.51094793723151e-07 1.81670510450454e-06 6.34967650883296e-154 8.16013483751528e-08 1.29840872833285e-05 3.53269905995835e-07 0 4.43898558032895e-07 3.92266513842058e-41 1.53842584963555e-05 4.57971561003954e-05 2.55738112813029e-06 6.14590235226048e-06 1.08768117978906e-26 5.33062722339375e-07 3.43946598362795e-07 0 3.78328293078495e-06 3.43824669781203e-06 3.77580524414493e-06 1.6464043059289e-06 8.33362013854462e-169 0 0 4.45511894729857e-06 XM_002694617.3 SEZ6L PREDICTED: Bos taurus seizure related 6 homolog (mouse)-like (SEZ6L), transcript variant X1, mRNA. 0.0 1.129e+04 100.00 0.988783570300158 NM_001184773.1 SEZ6L Homo sapiens seizure related 6 homolog (mouse)-like (SEZ6L), 0.0 5346 78.83 0.989257503949447 TCONS_00076086_5 sp|Q9BYH1|SE6L1_HUMAN SE6L1_HUMAN Seizure 6-like protein; 0.0 1696 85.96 0.979472140762463 2 coding 0 0 1 1 0.0558780771761281 0.72300415908911 -0.0389200714194987 0.512969643503279 ATGACCACCCTAGGAGACAGGGGACAACAGCCCCATGTCACAGCTCAGGAAACTGAGGCTCAGAGAGATGAGCCCCCGGAGGGAGATGCCGGCCAATCAGATACTTACCTTCTGCCCTCCGAAATCCTGGGGAGCAGCAGTCTGAGCAAGGAGAACCCCGAAGAGAGCGTGACCACGGCCCCTCTGAATCCAGTGCAGTCTGGGGATGAGCTTCGCGAGCCGGAGTTGGAAGGGACCGTCCCCTTCGCGCCTCAAGACCCAGCGGCTGTGTCTACGCTGCTTCCGCTTCCGGAGGAGCCGGGCACCAGGCACTCCTTCCCCGCCAGGAAGAAGCCGCCTTCGCTCAAGCAGGTGAACTCGGCCAGGAAGCAGCTGAGGCCGAAGGCCACGCCCGCAGCGGCCACGCAAAGGACCGCGTCCCAGCCGGCATCCCCGGGCCCAGTTCTGTCCATCGCCCCGGGGAAGCCCCGCCCACCCGGTGACCAGGACCCCATGGCCTCCGCAGGGGAGGAGACCCGCCCGCTGTCTCTGTCCTCCGAGGAGCCCCTCTGGCTGGAGCGGAAGGAAGGCGCGGTCCCCACGACCCCCGCGCCCCTGCAGATCGCCCCCTTCACCTCGCAGCCGCTGGTGGCCCACACGCTCCCCCGGAGCCCCGACCCCGGGGCGCCGGCCGTGCCCGAGGAGGCCCCGGAGGCTCCCCCCGAGGATGCAAGCCCCGTGACGGTGATGGACAAAGGGGAGACTGAGCTGACCGGGTCAGCCTCAGAGGAGAGCCAGGAGACCACCACGTCCACCATCATCACCACCACAGTCATCACCACCGAGCAGGCCCCAGCTCTCTGCAGTGTGAGCTTCTCTGACCCTGAAGGGTACATCGACTCCAGTGATTACCCGCCGTTGCCCCTCAACAACTTCCTGGAGTGCACGTACAATGCGACGGTCTACACTGGCTATGGGGTGGAGCTCCAGGTGAAGAGCGTGAACCTGTCCGAGGGGGAGCTGCTTTCCATCCGAGGGGTGGACGGCCCCTCTCTGACCGTCCTGGCCAACCACACGCTCCTGGTCGAGGGCCAGGTCATCCGCAGCCCCACCAACACCATCTCCGTGTACTTCCGCACCTTCCAGGACGACGGCCTCGGGACCTTCCAGCTGCACTACCAGGCCTTCATGCTGAGCTGCAGCTTCCCCCGCCGGCCTGACTTCGGGGACGTCACGGTGATGGACCTGCACTCGGGCGGGGAGGCCCACTTCCACTGCCACCTGGGCTATGAGCTCCAGGGCGCCAAGACACTGACGTGCATCAATGCCTCCAAGCCCCACTGGAGCAGCCGGGAGCCCATCTGCTCAGCCCCTTGTGGAGGGGCGGTGCACAACGCCACCATCGGCCGCGTCCTGTCCCCAAGTCACTCTGCAAATGCCAGTGGGAGCCAGTTCTGCGTGTGGACGATCGAGGCTCCGGAGGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGGCGCTGCACAAGAGGGATAGGATGATGGTCTACAGCGGGTTGACCAACAAGTCCACTCTTCTCTACGACTCCTTCCAAACCGAGAATGTCCCCTTTGAGGGCCTGCTGAGCGATGGCCACACCATCCGCATAGAATTCACGTCCAACCAGCCGCCGGCGGCCTCAGCCTTCAACATCCGGTTCGAGGCCTTTGAGAAAGGCCACTGCTACGAGCCCTACATTCAGAACGGGAACTTCACCACGTCCGACCCGACCTATAACATCGGGACCATAGTGGAGTTTACCTGTGACCCTGGCCACTCTCTGGAGCAGGGCCCGGCCATCATTGAGTGCATCAACGTGCGAGACCCGTACTGGAATGACACAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGCTCTCTGCCGTGGCCGGGGTGGTGCTGTCACCAAACTGGCCGGAGCCCTACGTGGAAGGTGAAGACTGTGTCTGGAAGATCCATGTGGGCGAGGAGAAGCGGATCTTCTTAGACATCCAGTTCCTGAACCTCAGCAACAGTGACATCCTGACCATCTACGATGGTGACGAGGTCATGCCCCACATCTTGGGACAGTACCTGGGAAACAGCGGCCCCCAGAAGCTGTACTCGTCCACGCCGGACCTAACCATCCAGTTCCACTCGGACCCCGCCGGCCTCATCTTTGGGAAGGGCCAGGGATTCATCATGAACTACATCGAGGTGTCGAGGAACGACTCCTGCTCTGATTTGCCCGAGATCCAGAACGGCTGGAAAACCACTTCCCACACGGAGCTCGTGAGGGGGGCCCGAATCACCTACCAGTGTGACCCCGGCTACGACATCGTGGGGAGCGACACCCTCACCTGCCAGTGGGACCTCAGCTGGAGCAGCGACCCCCCATTCTGCGAGAAAATCATGTACTGCACCGACCCCGGGGAAGTGGACCACTCGACCCGCTTGATTTCTGACCCTGTGCTGCTGGTGGGCACCACCATCCAGTACACCTGCAACCCAGGCTTCGTGCTGGAGGGGAGCTCGCTCCTGACCTGCTACAGCCGCGAGACCGGCACCCCCATCTGGACCTCTCGCCTGCCCCACTGTGTTTCGGAGGAGTCCCTGGCCTGTGACAACCCAGGGTTGCCGGAGAACGGGTACCAGATCCTCTACAAACGACTCTACCTGCCTGGAGAGTCCCTCACCTTCATGTGCTACGAGGGCTTCGAGCTGATGGGCGAAGTGACCATTCGCTGCATCCTGGGACAGCCATCGCACTGGAACGGGCCGCTGCCCGTCTGCAAAGTTAATCAAGACAGCTTTGAACACGCCTTAGAAGCAGAAGCGGCAGCAGAGACATCTCTGGAAGGAGGAAACATGGCTCTGGCTATCTTCATCCCTGTCCTCATCATCTCCTTACTGCTGGGAGGAGCCTACATTTACATCACCAGGTGCCGTTACTACTCCAACCTCCGCCTGCCTCTGATGTATTCCCACCCCTACAGCCAGATCACCGTGGAGACCGAGTTCGACAACCCCATCTACGAGACGGGGGAAACCAGAGAGTACGAAGTTTCCATCTAGAGAGAGCTCCACGTGGGACGGGAACGTACAAATACGAACGCAGCTACAACCTCCTTGAGAGACCCATCTAGAGACCATGTGGCATTTGATGGAAACCCCGGAGTGTCGGCTGGCTTTTCTTTAGACTCTTTACTGGAGACTTACTGTTTTCTTCGCTGTATTTATTATATTTAAAATCGAGTTTAGGTGTGTGGTTGGATGTATAGCAGCTACAGCCAAATTCGTGGCATGGCCTCAGTCGTGAAGGCGGGTGGAGGACCTGTAAAACGGCAAACGCAGCAGCTGAGGGAAGAGGGGAAAAAAACAGAACGCAACAGGCTGTCTCTCCCATAAGCAACTACGGCTGCATCAGATTGCATGCATCTTCAGGATCCATGCCCATGGTGTTTTCGTACAAATCTAAGGTTAGGTTGGAAAGGGGTATTTCTTGTTGAATTAACTGGGGTTGGAATTTGGCAAGGAGACTTAAACAGCTCTGCTCCAAAATCAGTCTGCATCCATCCTTCCGATTTCCCGGGCTTCTCAAAGGATTCGCCCCAGCTTCTTCCCCCCGGCCCCTCTGAGGGCAGCAAAGTTGTGACATGAACATTCTCTTTCACCACCCCAGCCTCCCTGGCTGCTGGCAAACTAAGAAAATGTTTTCTTTCTATAAAGGTGACAGATGACAAAGGAAAGTTTTCAGAGAAGATGAGCGATTTGAATTCCAGTGAAGAACTGGATGAGGGGGATCGCTGGGTAAGGGAATGGAGTGGATAAAATGTTCTTTTCCGTGACACTCTTCCAATGATGAAAGAGCAGGTAATTTATGCCCCCAGGGCCAGCGATCACTGTGTTCAGCAAGGCCACCCTCAAGCTGTGATGATTGATCTGCATGCTTTGGAGGCATGAGGAATGTTGCCTGTATAGTTAAAAGGGTATAGGGTTGCATAGGAGGAATCCAGAGATGAGCTCTGATGCCCTCCCGGGATGCTGGAACGCCAGAGCCCTTAAAATAGTGGAGATTCAAGCAAGGTGGCACCTTCAGAAGACCCTTACATTTAAGTATTTTGGAGGGAGGGTCCCATAGGAAGAAACTGCTTTTCTGTTCTCTGAAGCTCTAGCCAGATGTTGAATGGTGGTGTGAATGCTTGACCATGGAGGTGCTTAGAAATAGGAAAGGGGATTTAAAACCTCCATGGCATCCCATCATACTATTTGCACTCCAATGAGGAGGGAAGGAGAAGTTTCAGGCCGGGAAGGGCTTCTCAGCAGCTCATTAATCCTGTGAGCATCCTGGTATTTTATCAGGGTCCTTTGCCCCACCCCAATAGGACTGGTGAGCATGTGATTATCTGGAAGATTTTTTTTTCTAAATATAGGTGTAAAGAGAAGGCAAGGGGTAAGGATGCTCGGAAGTAATAGCCCATGTGAGGCTAGTTCATCTCCCAAGTGATGGCTGATGGCTCAGAGAGGTGCACCAGCCTGGTGATTTGGGGGTCCTCTCTGGCACCTTCTCATGCTCTCTAGAATTGTTTTAAATCAGCCGGTTTTCAAACATTGAAAGGCTTTTCAGGCTGCCCTGCCTTTGGGGCAATGGCCTGGAGTCCACGTCTTGGACGCTTGCTTAGAAAGCCTCTGGAACAGAATAGAGCAGTTGGCTTTGCAGACACACAGACACATACACCCTCCTCCCAGCAGGACCGTGGTCCTCAGTCTCGGGGGGTCTGAGGCCCACTATATTTTCCTTCTGCCAGAAAAGGATCCTGCACACTTGCTCCTTCCAGCATGCACTCATGATGCACAGCAAGAGGCCATAAAACGCTGCCTTCCATCCGCCCAGAGTCCACCCCATTCTATGAAAGAACCAGAGGAGAAATGTTCCAGACTGTTAGTGAGCAATGTCATGTCTGGAGAAACAGCAGCAATGCAAATAATGCAAACCCTTTTTAAAAAAAAAAAAGGCAGAATCCAGTCGTTGCTTTGATATCTATTTGTGGCTGATTTAGCCCTAACCCTGGGTCATCCAGAATGAAGAAGTCTATTAATGACATTTAATATTAGAACAGACTATGGTTACGTGAACACTAAACGTTTGCCTTTCGTACAGACTGACAAAAAATAAAATCTTCATTCTAACCCCGTTCCCTAAAACTGGCCAAGCTATGGCCTAGGCTTTCTTACTGGCTGTTGGAAAGAGTAGAGAGGTGGAGTTTTGTTTTCTTTTTTTTTTTTTAAGGATTCCAATGTATCAGTTCTGTCTTAGTAGTACAGCTCCTGTAACCATGTTTTAAAAGTTTGTTTAAGCCAAAAGTTGGATCATGCAAGCTTGACAAGGTATAGTGTGATTGAAGGACAGGTTGGTGTCTATTTTTCTTTCTCAAATATCTGAATGTGTCTTTGTAATATGTAAAGGTGAAACAAATCATGATAATCATGCCAAAAATTTACCAGGCATCTCACTTCAGCTCCTGTCATGTCTGTTTTTCTAAGATCAATGTTAAAATCTGCTGGGATTAAATATTTTTGAATAGGCTACAATCCTGAGAAACTCGAGAACGGACTGAACCGTCCTACAAGCTACCCTTTGTAAAACATCGGGGAAATACGTTTACAGAGATTTCGAGCTTCAAAGAATGCATGTGATGGTGTGTATTACATGCTAATTCGTATAAGCTGTATCTGCCAGCTACCACCTTGTGCTTTAAAAGGCACACACTCAATCCTCTTCAGCTTGGAACTCATCCTTCTGCTTTTTTCAGGGGTAGAGGGTAGAATTATTTAGCCAACATAAGTATTCCGGTCGCTACTTGATGGCCATCCTTACTTAGTTCCACAGACATGCTTTAAAAAATGATCTTTTGAAGCCAGCTCCTTGGAGAGCCTGCAGAACCTCAGGCTGATGGCTTTGGAAACTGCCAAACAGCCCAGCAAGAAACAAAGTGGCTGCGTGACCCAAATGGTTGTATACGTGGACGGGACTTGGCAAACACATGGGTAGATTGAGGCTGAGTGTGAGCCTTGGTAAAAATGACTTTTTCTTTAGGGTCAACCCAAAGGGTCTGACTTTCCTATGCTTTTTGAGGTCACTGGGTCATTTGAGGTCAGGTTTTATTGAGTTGTTTAGAGCCCCCAAAGGTAGGTAGGCTTTCTCCTGGGGAGTTTTCATTTCCATTTTTTTGCCCAAATTAAATGCAAAACAAAATTTCTAAGCTAAAATAATGAAGTCATTTTCCACTTTGTATATATTGATGCTAATAAAACAAACGAAAAAGAGTCAAA EMBV3_15300 AGGGGTGAAGCCTTGGCATCGTGTCATTAGACTTGAGGATCATGGCTGCGGGAAAGTTTG Variant GeneID:506231|BCAR3:NM_001024483:120_cdna 160^305 1 EMBV3_30497 GeneID:506231 3 GENE BCAR3 MGC127863 breast cancer anti-estrogen resistance 3 EMBV3_30099 GGCCCAGCCATTCCTGTGGACTATGACTTTGGCGATGCTGAGAAAACTGCATCTTATTAC Gene GeneID:508016|ITLN2:NM_001101063:245_cdna Constitutive 0 NULL GeneID:508016 3 GENE ITLN2 ITLN1 intelectin 2 EMBV3_38890 CAGGTCATGTGGACCAGTTTGTGTGCCGCCAGCAGGGAACGGGAAAGCTCAGAGACCTAT Gene GeneID:783664|GTLF3B:NM_001102331:123_cdna Constitutive 0 NULL GeneID:783664 19 GENE GTLF3B MGC159470 MGC33894 transcript expressed during hematopoiesis 2 EMBV3_31156 CATGTCCATCATCATTGTGGGCGTGGGCAATGCCGATTTTTCTGACATGAGGCTGCTGGA Gene GeneID:508059|CPNE6:NM_001045990:92_cdna Constitutive 0 NULL GeneID:508059 10 GENE CPNE6 MGC137714 copine VI (neuronal) EMBV3_06971 TGTTTTGCCGGAACAACAAGGAGGCGGTGGCGCTCTACACCACCCACATCCTGAAGGGAC Gene GeneID:786356|NANOS1:XM_002698543:44_cdna Constitutive 0 NULL GeneID:786356 26 GENE NANOS1 NULL nanos homolog 1 (Drosophila) EMBV3_24925 AGGCATCTCCTAAAGAGTGTCACATGATAAAAGCAAGACATAAAACTAGCGACCTTGGGG Gene BVT0102_188186 + 0 NULL GK000027.2:16711995-16733420 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01926 ACTGTCACTGTGCTCTTTGTAGTATGCCTGGTGTTTCTTCTGGGACGTTGCCTGTGGTCA Gene GeneID:615030|IL15RA:XM_002692067:4_cdna Constitutive 0 NULL GeneID:615030 13 GENE IL15RA NULL interleukin 15 receptor, alpha EMBV3_42199 GCTGAGTCCTGTGTGTGTCTCAGTGGATTTTAGTCTGGAAACAAGACCCATCACCCTGGC Gene BVT0102_049660 + 0 NULL GK000013.2:63670698-63675146 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043494 TCONS_00043486 TCONS_00043493 TCONS_00043496 TCONS_00045905 TCONS_00043492 TCONS_00043489 TCONS_00043488 TCONS_00043487 TCONS_00043495 2 XLOC_025954 XLOC_026568 Coding TCONS_00043486 XLOC_025954 Coding Coding CBFA2T2 13:63532720-63674989 j TSS32141 6652 1 TCONS_00043486_2 595 0.0631389055923031 11 0.953320493716085 0.00728399321228648 0.00391060558076473 0.00219422028500817 0.00361789556530026 0.00338625608088244 0.00108497111521626 0.00181119935392124 0.00329036184492421 0.00360673953929071 0.00048563179220018 0.000754678487954675 0.000528928397145916 0.000749914925668075 0.00180030979279134 0.00168191643325296 0.000624575862379157 6.72460908709075e-12 4.3816926152755e-08 0.00312674666323671 0.00663185890495062 0.0021977173911672 0.000167970619720442 0.000668786998940324 0.00089327062393195 0.00760103435679934 0.00457851188749697 0.00375099984108693 3.00551957276638e-05 0.000610135698473518 0.000665077962049844 XM_606138.6 CBFA2T2 PREDICTED: Bos taurus core-binding factor, runt domain, alpha subunit 2; translocated to, 2 (CBFA2T2), transcript variant X2, 0.0 5625 100.00 0.46873120865905 NM_001032999.2 CBFA2T2 Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 2 (CBFA2T2), transcript variant 3, mRNA. 0.0 3099 81.86 0.467829224293446 TCONS_00043486_2 sp|O70374|MTG8R_MOUSE MTG8R_MOUSE Protein CBFA2T2; 0.0 1143 96.47 0.998319327731092 3 coding 0 0 0 0 0.0015350268603424 0.987927177230535 0.0240826079158932 0.617428101707547 GGCGGGGCGGCGCGCGGCCTAACGGCGGCGGCGGCGGTGGCGGCAGCAGAGTCTCTGGGGTCGGCTAGCTTGGCGGCTACAGGTCCCGCAGCGGGGCCTGCGGGGGACCCGGGCCGCGAGTGGAGGCGGAGGTGCGCGGCAGCGGCGCTGGGCGATGGTGGGCGTCCCTGGAGCGGCCGCCTTCCAGCTGGGTGCTGACAAAAGGGTGCCAGCGATGCCTGGATCTCCTGTGGAAGTGAAGATACAGTCAAGATCCTCCCCTCCCACCATGCCGCCCCTTCCACCAATAAATCCCGGAGGACCCAGGCCTGTGTCGTTCACTCCTACAGCACTGAGCAATGGCATCAACCATTCTCCTCCTACCCTTAACGGCGCCCCATCACCACCACAAAGATTCAGCAATGGTCCTGCCTCTTCCACATCATCTGCACTAACTAACCAACAGTTGCCAGCCACTTGTGGTGCTCGGCAGCTCAGCAAGTTGAAACGCTTCCTCACCACTCTGCAGCAGTTTGGCAATGACATCTCACCTGAGATTGGGGAGAAGGTGCGGACTCTTGTTCTAGCGCTGGTGAACTCAACAGTAACAATTGAAGAATTCCATTGCAAGCTCCAGGAGGCTACAAACTTTCCTCTTCGTCCTTTTGTTATTCCATTCCTCAAGGCCAACCTGCCTCTGCTGCAGCGAGAACTGCTGCACTGTGCTCGGGCCGCCAAGCAGACCCCATCCCAGTACCTGGCTCAGCACGAACACCTTCTGCTCAACACAAGTATTGCGTCTCCTGCTGACTCTTCTGAGCTGCTCATGGAAGTGCATGGAAATGGAAAAAGGCCCAGTCCAGAAAGGCGGGAAGAGAGCAGTTTTGAAAGAGACGCAATTGCTCCTGAGCCTCCTGCCAAGAGAGTGTGTACCATTAGCCCTGCTCCCCGGCACAGTCCTGCCCTCACTGTGCCCCTCATGAATCCTGGGGGCCAGTTCCATCCTACTCCTCCGCCTCTTCAGCACTACACCTTAGAAGATATCGCAACTTCCCACCTATATCGTGAGCCCAGCAAGATGATAGAACATCGAGAAGTTCGTGATAGACACCACAATCTTAGTCTAAATGGAGGCTATCAAGATGAGTTGGTAGACCACCGTTTGACAGAAAGGGAATGGGCTGATGAATGGAAACATCTTGATCATGCCCTCAACTGCATTATGGAAATGGTAGAGAAAACAAGGCGCTCCATGGCAGTCCTGCGGCGCTGTCAAGAATCTGACCGTGAAGAACTCAACTACTGGAAAAGACGATTCAACGAAAACACAGAGATGAGGAAAACAGGGAGTGAGTTGGTCTCCAGGCAGCACAGTCCTGGGAGCGCAGATTCTCTCAGCAATGATTCTCAGCGGGAATTCAACAGTAGGCCGGGAACAGGATATGTACCTGTGGAGTTTTGGAAAAAGACTGAAGAAGCTGTGAATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGAAAGCTGTTGCTGAGGCAGAGCAAAAAGCCTTTGAAGTGATTGCAACCGAGAGAGCTCGAATGGAGCAGACAATAGCGGACGTCAAGCGGCAGGCTGCAGAGGACGCCTTTCTCGTCATAAACGAGCAGGAAGAGTCAACAGAGAACTGCTGGAACTGTGGCCGCAAAGCCAGTGAAACCTGCAGTGGCTGCAACATCGCACGATACTGCGGCTCTTTCTGCCAGCATAAGGATTGGGAGCGGCACCACCGCCTCTGTGGCCAGAACCTGCACGGCCAGAGTCCCCACAGCCAAAGCCGGCCCCTGCTTCCTGGAGGGAGGGGCTCCTCAGCCCGGTCCGCCGACTGCAGCGTCCCCAGTCCAGCCCTGGACAAGACCTCGGCAACCACCTCACGCTCCTCCACACCAGCGTCTGTGACAGCCATCGACACCAACGGACTCTGAGCCCCAGACTCACTTCCCCCGGCAACCTCAGAGCGTGACAGAACTCCGCACGGAAGGCTGGCTATGTGAAGCAGTGCCAGTCGCTGTTGGGTCATCATCCAGAAGAGAAGTGGAGGCAGGCAGACTTGAAGCCCCAGCCTGTCCACACACTTGTCCATTTCCCACCTGTGTGTGCACGGCCGCTGGCTGGACCTGACTCCTCCATAGCTTCCAAGCTTGTTCTTCTCCCAGCTAAAGCTGGCACGGCCAGCCACTTTTCCATGTAGACCGCCAGCTCCTCCCTGCCTTGTGAGCAAGCCGACTGTCAGGTGTGCCCAGTCAGGCTGGAAGCAGCTCACCCCTTCACCGTCTGCTGCTCCAACGTCCTCCCGCAACAGAGGCCTAGAGACTGATAGCAAGCTGGGAAGGAGGGCTCTCTCCCACAGGGAGTGGCTCCTCTTGCCCCTGAACAGTTCCCTGAGCCCATTTCCACCCTCAGCAGGTGCCACTGATTAGTCCCTGGGGACTTGGGCACGCAGAAAGCAGCACTCAGGACACCCTCGTCGGCCCTGCCGTTCAGACGTAAGATTTTCAGAAACCACAGGAAGAAGTCACCATTTCAGTAAAAACACCCATAATAAAAAATAAAACTTCCACCAAGCATCACAGATCATGTTGGACAAGATTGTCCAGCCTGGCTGGCTGTTTTAGTTTGGGACCCATTTTTTTTCTCTCTCTCTTTTTTGATTTTGCTTATGCAGAAAATAGTTTTCAGCGCATGGATTGGTCTGAGGGAGAATGAGACTCAATTATGGATTGTCTCTTCTCTCTGAGCATGTTGGCCAAACTAGTGTCATCACATTATTGAATGGATCATCTGTTGGAAATGCAGAAACTTTTGTCACCACTTGGCTCTTTGCACAGTCGTCTTGTTCCCTGTCCTTTTATTCTCAGACCACGCATGTCCAGATCACTGGGTGGATCTTCTTCCCGTGGTCTCTGTCTGGCGCCTCTGAAGCCATAGTTGACCCATAGGATGTGATGTGGTGTGGCTGTGACTTGCCTCACCAGTCAAGGCCTGGTCACTTCTGAGCGAACCTTTTGGACCTGAAAGAATTCTTCAGACTTTGTCATTATGTGTCCTATGTCAGTTTATTATTGGGCATACAATCCTGTTTCCCTTCTCTAATTCTGTTGATACCTACCCTCTTTGAGCTAAGAAAAGTTTCCTGAAATGTGACAACCATTTGTGAGAGCCTGACCAATTTTTCTTCCTGTCTTCAGGGAGTTTTTCCAGCTGCTTACCTGATTCTCCAAACATGACACCACCTGTACTCCCTTTAAAATGTTAGGAATTGCCACACACGTTCTTCCTTGCCATTCAAGTTCTATTGGGAGCCCAAGGACCCTGACCCTCCCCCTGTCCAACTCCAAGCCTTTAGCACCCACTTGCACCAAGGAATGAGTTGGTTGGCCCTGCTCCTGCCGACCCTTGAAAGCTCAGCTTTAGATGGCCATTTTCTGCACATTGCCCAGAGTGAATCGAAGGCTCCCAGTAAGGTATCAGCATAGGTACCGTTATCCTTACGTACAGGTATGTCTTACTTTAAACACTAAGTCCCAGGACCTCCCTAGTGGTCTAGTGGCTATGCTTCTGTGCTCCCAATGCAGAGAGCCAGGGTTCAATCCCCGGTCAGGGAACTAGATCCCACAAGCTACAACTAAGACCCAGAGCAGCCAAGTAAATAAATAAATAAAAACGGTAAGTCCCTAATTTATCTTACTCAAGGATTTTCTGTCTTAAACTCAGTATGAGGCACCATTAAAATACCCAGACTTCTGCTGTGTAAAGTAAGGTATACCCAGAGAAAGAATAACAGAATAGTTGCTTTATTGTTCAGCTTTCCTTTAGTTGCAGCAGTCGAGGTATCCTGCCTAACAGATGAAATCAGAACCTCAGACAGGAGTTGCCTGCGTTTCCCTGAGAAGAGATGTCCCATGAGAGGCGGTCACTGAGCCTATAAATCTGGTGGCAGCAAGAGGGTGTCTCACAGTGTCCACTGGGTCTGACCTCAGCTCCCTTTTTCGTCAGCAAGTTAGATGAACACCTAGGTGTGTCCTGTAAGTCTTCAGTGGCTGAGCCAGGGTAGCTCAGGTTTTTTCGGGTTGGAATAAAGAGCCAAAGCCAACCGAATACTGTTTGTCAGACTGGATGTCAGTCTCTACAGCTGTGGTTTAGGTTTAGTGTGCAGGTAGGTCCTAGCTGACTTTTGTGGACTGTGGATCCAACGACAGCTTTATTTTCAGAATTTCTGTAATGCTGTTCTAAACTGCTTTAGAACAGCTCACGTGCCACCCAGAGGCCAAGCTAAAGATTTCCGCAGTGTTCCACATTGTGGTTCAGATCTCAGGCCTGGTGCTGTATTCATTTTGGTCAGTTTCACACGTCGGTTGCTAGGGCATCTGTCCAGAACTTCCTATTTATATGTAAAGAATCCCTTTCTCCAGCTGCCTCTCTTCTGAAAGTCTCAGCTCTGGTTGGAGTTGGGAGGAGAAGGGACACTGTCTTGGAATGCAGTGAGGGGACTGGAGGGCCAGGGCTGAGTCCAGGTTCCCCACTTGTTTTCCGTGTCTGCTGATAACCATATTGATGGTGCAAATTCAGGCTCCCCCTTTCATCTAGTTAGACTTAAAGTATCTTACTGTAATCAGACTGCTTAGAGGACCAACCTTTATAGTTTAAGGGGACAAAGACAAGACATAGTGGTGGTCCTGAAGGTCTTGCCCGAGTGGTCCTGGGCTCTTCGTGTTATCCTAGGGATCGAAGGCAAGTGTGACAAGCGGTGGCACATCACTCTCCTCTGCCTAGTGAGGAATGGCTGCAGGAGCCAGAGAAGACCGGAAGTAGCCAGCATGGGAGCTGTTTTAAATGTTCTGAGGGAAGCTTTAGGGCCGGATCCTCAGAGCTTCAATCATCCTCTGGGCCCCCACTGCCTGCTCCACCCAGTGGTGAAAACAGACTCAGGTTCATTCCACCTGCTCGGAAGTGAGCAGCCCTCCTCCTGAATATGAGAGCTTCCCCTGGGGGCGTCCTTGCAGCTCTCAGGATGGGGCTCAGTCATGCCACCCTGAGGTCACAGAGCAAATGCACCTTCTCTTGGACAGTGCTGAGTCCTGTGTGTGTCTCAGTGGATTTTAGTCTGGAAACAAGACCCATCACCCTGGCAAAGGTCCATGCCTGGCGCTGGCTGCTGCGGGCCCTCTGCCGTGTAGATGACTTTTGCACATCTGGACCAGTGGCTCCACCTGGAGCTCCTCACTTGTTGGTGTCAACGTGAGCATCTTCAGCTTCTAGACAGAAAATCTACACTTCACTTTGTACAGCCTTGTCCCAAAGTCAGATGGATCCCCAGTGCTGTCTGTCACCTGCTTGCAAAGGGCAGACCTTGTGGGCAGTTCCAGAAGAGATCTCAGCAAGTGGGCTTGAAGTTCCAACAACACAATTAAAATTGTGTGGTCATGAGTTCTTCAGGATGAAAGCATGAATAATGACCACATGGCTGTTTGTCCTGGAAACTGTAGATGAGATTATGGATTGAGTAAATCATTTAAAATAGAACTCATCTTCGAGGCTTTCTTCAGAACTGATTTCCAGGCTCCCAGGACAATAGACTAAGCCAGATTTCTTAGATTTTTTTTTTTTCCTTAATCAATTTACAGAGAACTGGGTGGTAGCAGTAAGAAAAACCAAATGTAAGAAAAACCAGAGAGAAATGGACTGTTCCAGCATGGGCCAACCAGCCAGCTGTTGGGACTCCGTCTGGGGTGGGGTGGGGGGTTACTGGGCAAGCTGTTGAATAGGGCCCTTTCCAACTCTGCGTGTCTGTAGTTCTTGTGAAACCAAAATGTTGACTACCTGCCTCTTTGCCCACGTGCATTGACGTGCTCAATTCCAAAGACGATGGTGCAGGCAACCTTTTCCATCATGAGCCAGGAGAAGGTTGAGGCCTGAGGGCAGCCTTTGCCTCCCCGCTTTGCCTCCATAGCCCCAGAGATGGCGCTTCCCCTGCTACCCCATCTGGTCAGACCCACAACTGCCCAGTGTACACTCATTGATGCTTATACCAAATAGGGCATGTGCGGCTGGCGGCTGGCAGGGACAGCCCCGGGCCTGCGTTGGAGTTGGCAGAGAGAAGCGGCAATAAGCATTAGGCGGATGGCTGAAAGTGCTGTTTGGCTCAGAGGCCTTCAGTCCACTTTCACAGCTTTCCAAGTTCCTGATGAGGCTACAAAAGCTCCATCCACAGAGAAAGCCAATAATGTAAATAAATCCAAAACTGAGCTTCCAAGCGTGGTTTTTTTAAGGGGGATGATGAATGTGAAACCACCCACAGGATGCGGTAGAGTTGATTTTTTTCTGTGCTTTGTCATTTTACTCTGATAGGAACTTTTGTTACTTAACTCTGTGCATAACTTATTTAAGGTACTGTATAAATGAACCAAAACTGTTAAATATGTATTTAGTTTGTTCTACTTCAAGTAGTCAATAAAAAGGCTATATTCCTTTTCTGACTCAAGCTGGAATGGGATTAAGAGGGAAGGTGGTGCGTGGACTTGTGTAAGACATCCTGCCCGCAGGTTTCTACATCCCCTCTGCCTTGTTCCTCGATCTGCTAGGAGGTGGTTCCGGCTGCTGGAACTGTGGGAAGCCAAGTGCCAACAACAGCACAC EMBV3_23615 CACGTGATTACAGCACTCCTTGTGAAGAAGGAATAGTGCTTGGAGCGGCTGTTGAGTGTG Variant GeneID:513107|STYXL1:NM_001101968:164_cdna 190^319 2 EMBV3_18802 GeneID:513107 25 GENE STYXL1 MGC179477 serine/threonine/tyrosine interacting-like 1 EMBV3_11715 GTGGCACGGGTTCAGCTAACTCTTTAGCCGTCGTTACTCAGTGTCATTTCTTTTGCAGAG Gene GeneID:524142|OPA1:XM_002684831:161_cdna UTR3_Alt 2 NULL GeneID:524142 1 GENE OPA1 NULL optic atrophy 1 (autosomal dominant) EMBV3_16916 CTGCGGAACCCAAGCTGGTTAATTTCCAACTCAAAAGAAGCACCCCTCAAGCAGCCCCTA Gene GeneID:536753|CPN1:NM_001076080:192_cdna Constitutive 0 NULL GeneID:536753 26 GENE CPN1 MGC128810 carboxypeptidase N, polypeptide 1 EMBV3_02730 CCACCGCCCTGATGAAACTGAAAAGTCTAGGTCTTATCCATGCCGACCTCAAACCGGAGA Gene GeneID:510158|HIPK2:NM_001101922:616_cdna Constitutive 0 NULL GeneID:510158 4 GENE HIPK2 MGC152387 homeodomain interacting protein kinase 2 EMBV3_10216 TTTGGAGCCCACGCCCAAAACCCTAAACTGCATCGAACTACAACTCCCAGCATGCGAAGT Gene BVT0102_399628 - 1 EMBV3_08788 GK000019.2:45367550-45375504 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097298 1 XLOC_058213 NonCoding TCONS_00097298 XLOC_058213 NonCoding NonCoding LOC100847653 19:45373629-45375480 = TSS72124 540 1 TCONS_00097298_1 38 2 0.709189189189189 3.76321526909996e-05 9.1642317314428e-06 3.31909536965015e-06 0 2.05134474156498e-05 2.97715981853243e-05 3.62977369473492e-05 5.37004574033068e-05 4.37439621885482e-05 0.000107052645771727 7.6230512733666e-05 5.08378984150479e-09 2.31220357684396e-05 9.00232024043479e-05 0.000193462741724711 0.00103086548725952 0.00553408194383174 0.00120807489238059 1.65901010096034e-10 2.84639257135376e-05 0 0.000496083135151444 0.00102075333144573 0.000467418137654892 0 0 0 8.52402040415203e-05 0.000291057993383187 0.000451101958564361 XM_005220832.1 DCAKD PREDICTED: Bos taurus dephospho-CoA kinase domain containing (DCAKD), transcript variant X1, mRNA. 2e-146 522 100.00 0.533333333333333 NM_024819.4 DCAKD Homo sapiens dephospho-CoA kinase domain containing (DCAKD), 1e-22 111 74.68 0.238888888888889 0 noncoding 0 0 0 0 0.0245858901575672 0.826589412517144 -0.0232836305575418 0.686980359837623 AGAAGGGCCCGGGGTTGTCGAGGCCCACGCTCCGCCACCCGGGCGGTCGCTTCGCATGCTGGGAGTTGTAGTTCGATGCAGTTTAGGGTTTTGGGCGTGGGCTCCAAAATCCTAGATTTGACCTCTGCCGGCTCTGAGCCGTTATTGGCTGCCGTTAAGGACCGTTACCATTCTCAGATTTGCGGAGGCTGAATGAAGGCTAATGAAATGGAGCTTATGAAGAGTGATTATGGAGGATGATGGTGCTGGTGTCTGGCCCCTTGCCATTCTTGCAATCTAAAGCTTAAGTAAGACACCCTGCATGGTATTTTACTGCAAACCAAGCAGTTTTGGCTCAGTGGAGAGCTTTTCTGGTAGATAGGCAAGCAATGTGACTAAGGTGACCAAGCTCAGAATGCAAGTATGAGTCCAAGGTTCTGGAATCCAAGTTAGAATCTTCTAAAATCTTAGATTTCGTAGGATTCCTGATTTCTCTATAGTAAAAATTTAAATTTTTACGTTTTTTAAAAAAAATTAAAAAAAAAAAAGAAATTGAGTATA EMBV3_05986 CCCAACTTGCTGTATCAGAAGTTTGTGAAGTCTGACCGATGAGATGCTGCTCCAGGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06510 TCGTCATGATCGCCACCGGGTGGGTCAAAGCCCCACCAAGGCCAGCCTGTATGGAGCCAT Variant GeneID:532775|TMEM38A:NM_001083463:92_cdna 479^566 1 EMBV3_22258 GeneID:532775 7 GENE TMEM38A MGC143431 transmembrane protein 38A EMBV3_12482 ATCCTGGCCGCACACATGCAGATGGAAGCCATCATTCTGGACAAGACTCTGAGGAAGGAA Gene GeneID:100296870|LOC100296870:XM_002693951:43_cdna Constitutive 0 NULL GeneID:100296870 16 GENE LOC100296870 NULL hypothetical protein LOC100296870 EMBV3_25170 GTGCCGCGGCCCCAGAATTTAGAAAACGGCTTAAATCTAATTGGCTCCCTAAGGATCTCA Gene GeneID:100138599|LOC100138599:XM_002691826:514_cdna Constitutive 0 NULL GeneID:100138599 12 GENE LOC100138599 NULL hypothetical protein LOC100138599 EMBV3_33707 CCAACCTCTCAGGTGCCTTGCATCAGGATGATAAGCGACAAAGGTAGTTGGAAAATGCAA Gene GeneID:512761|CRLS1:NM_001098951:1012_cdna UTR3_Alt 3 NULL GeneID:512761 13 GENE CRLS1 MGC143123 cardiolipin synthase 1 EMBV3_23712 CTTCTGTATGTTATTTAGACAAGAGATGGGAATGAGGCGGGAGGTAGAGGAGGGGGGAAG Gene BVV0102_290068 + 0 NULL GK000003.2:14679217-14697381 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172078 TCONS_00172080 TCONS_00172079 TCONS_00172077 TCONS_00172081 1 XLOC_104021 Coding TCONS_00172080 XLOC_104021 Coding Coding LMNA 3:14695232-14721391 j TSS128240 2605 1 TCONS_00172080_3 537 12 0.900871626271122 0.00139676318670888 7.20212053787086e-20 0.00148547339545305 0.000307935473458056 0.000179374145302362 0.000359450908150639 0.000849762756230265 0.00100790580179912 0.000622154463371127 0.000239326191886597 2.44292176416299e-05 0.000143578633048271 7.45045074979278e-05 0.000166228892645929 5.51430999954503e-68 0.00693647614598231 0.000116143178614965 0.00178172774844036 0.00266638562624239 0.00282229941679814 0.000631454902560487 0.00152136723319843 0.00114940533796444 0.00204060768378145 0.00168813600904893 0.000513362180883778 0.00156058229162195 0.000532971571758841 0.000242899923392844 0.000320690603701474 XM_005203620.1 LMNA PREDICTED: Bos taurus lamin A/C (LMNA), transcript variant X1, 0.0 4594 100.00 0.977351247600768 NM_170707.3 LMNA Homo sapiens lamin A/C (LMNA), transcript variant 1, mRNA. 0.0 3113 86.48 0.977351247600768 TCONS_00172080_3 sp|P02545|LMNA_HUMAN LMNA_HUMAN Prelamin-A/C; 0.0 963 96.65 0.998137802607076 2 coding 0 0 1 1 -0.0126264293428264 0.942974536755812 0.0174925916569316 0.701031682603433 GGGATGGAGAGCAAGAGAGGGAGCTGTCACTGCGGAATTCCTCTCTGGCCCTAGTCTGCAATTCCAAGAAGGAGGGAGACCTGATGGCCGCCCAGGCCCGGCTCAAGGACCTGGAGGCTCTGCTCAACTCCAAGGAGGCCGCGCTGAGCACTGCTCTCAGCGAGAAGCGCACGCTGGAGGGCGAGCTGCATGACCTGCGGGGGCAAGTGGCCAAGCTCGAGGCAGCCCTGGGCGAGGCCAAGAAGCAACTTCAGGATGAGATGCTGCGACGAGTGGATGCTGAGAACCGGCTGCAGACCCTGAAGGAGGAGCTGGACTTCCAGAAGAACATCTACAGCGAGGAGCTCCGTGAGACCAAACGCCGCCACGAGACGCGCCTGGTGGAGATTGACAATGGGAAGCAGCGAGAGTTTGAGAGCCGGCTGGCGGATGCCCTGCAGGAGCTGCGGGCCCAGCACGAGGACCAGGTGGAGCAGTACAAGAAGGATCTGGAGAAGACCTATTCGGCCAAGCTGGATAACGCCAGGCAGTCCGCGGAGAGGAACAGCAACCTGGCGGGGGCCGCCCACGAGGAGCTGCAGCAGTCCCGCATCCGCATCGACAGCCTCTCGGCCCAGCTCAGCCAGCTCCAGAAGCAGCTGGCAGCTAAGGAAGCGAAGCTGCGGGACCTGGAGGACTCGCTGGCCCGTGAACGCGACACCAGCCGGCGGCTGCTGGCAGACAAGGAGCGGGAGATGGCGGAAATGCGGGCAAGGATGCAACAGCAGCTGGACGAGTACCAGGAGCTTCTGGACATCAAGCTGGCCCTGGACATGGAGATCCACGCCTACCGCAAGCTCCTGGAGGGCGAGGAGGAGAGGCTCCGCCTGTCCCCTAGTCCCACCTCGCAGCGCAGCCGAGGCCGGGCCTCCTCCCACTCGTCCCAGACACAGAGTGGGAGCAGCGTCACCAAAAAGCGCAAGCTGGAGTCCACCGAGAGCCGGAGCAGCTTCTCCCAGCATGCTCGCACCAGCGGGCGCGTGGCCGTGGAGGAGGTGGACGAGGAAGGCAAGTTCGTGCGCCTGCGCAACAAGTCCAACGAGGACCAGTCCATGGGCAACTGGCAGATCAAGCGCCAGAATGGAGATGACCCCCTGCTGACCTACCGCTTCCCACCAAAGTTCACTCTGAAGGCCGGGCAGGTGGTGACGATCTGGGCTGCAGGAGCTGGGGCCACCCACAGCCCCCCTACTGACTTGGTGTGGAAGGCTCAGAACACCTGGGGCTGCGGAAACAGCCTGCGTACAGCTCTCATCAACTCCACTGGGGAAGAGGTGGCCATGCGCAAGCTGGTGCGCTCAGTGATCGTGGTCGAGGACGACAACGATGAGGATGGAGACGATCTGCTCCATCACCACCACGGCTCCCACGCAGGCAGCAGCTCGGGGGACCCCGCCGAGTACAACCTGCGCTCGCGCACCGTGCTGTGCGGGACTTGCGGGCAGCCCGCAGACAAGGCGTCTGCCAGCTCGGGAGCCCAGGTGGGCGGATCCATCTCCTCTGGCTCCTCCGCCTCCAGTGTCACAGTCACTCGCAGCTACCGAAGTGTGGGGGGCAGTGGGGGTGGCAGCTTCGGGGACAGCCTGGTCACCCGCTCCTACCTCCTGGGCAACTCCAGACCCCGAACCCAGAGCCCCCAGAACTGCAGCATCATGTAACCTGGGACCTGCCAGGCAGGAGTGGGGGCGGAAGCCCATGCTTCTTCCTCACCTCATGCCCACCCCTGCCCTGCACCTCACGGGAAGGGGTTCGAAGCCAAAGAAAAATAGCCCTTTGTTTTTTCTTCTATGTTTTGTTTTTTGTTTTTCTAAGAGAAGTTATTTTCTACAGTGGTTTTATACCGAAGGAAAAACATAAACCAAAAAAAAACGCGCGCATCTATCTCAATTCCCCCCCTTTTCTCCCTGCTTCCGAGAAACTCCGTATCTGCCTTAAAACCAAAGAGGGAGCCGAGGAGAGGGGCTGCTTTTACAAAGCCTCGTTTCTGCTTTTCTGCCCTGCCCGCCACCCCCATCCCGGGGACCCCGTGACATGGTGCCTGAGAGGCAGGTGTGGAGTCTGCTCCGCCAGCCTCCAAGGGAGGAGGGCTGAGCCTCATCCCTGGGCCGGCCCCCATCGTTCCACGACCCCTGGCAGAGGCTCCTCCGCCTGCCTGCCCCGTCCCCTCCTCTCCCCAACCCCGGGGTGACTCGATTCTCCCAGGTCCCAGCTGCGTTTGCTTCTTCTGTATGTTATTTAGACAAGAGATGGGAATGAGGCGGGAGGTAGAGGAGGGGGAAGAAAGGTTAGTCTGAGCCTGCCTTCACCTAGCTTTAGAGCCAGGGGTGGGTTCTGCCCAGTCACTACTGGAGGTCGGTCAAGGTCACGTGGGTGTAGGGGATGAGGGAGAGGGAGGCCTACTAGGAAAGGGGAGAGCCTGCTGGGGCCCCACCGAAGGGGAGGAAGGCGAGGAAGTGTGGAGGGCTTGCGGCAGCGGGTTTCAGCAAACACTAAGGAGCCCCTTGCCTCCCGTTTCCCATCTGCACCCCTTCTCTCCTCCCTGAATCAATACACTAGTTGTTTCTAT EMBV3_37011 AAATGAAAACATGGATAGACCTCTGAATAGTGGGTTCTTGGTTCACATACTCTTTTGCAG Gene GeneID:504746|ECT2:NM_001097573:7_cdna UTR3_Alt 3 NULL GeneID:504746 1 GENE ECT2 MGC138945 epithelial cell transforming sequence 2 oncogene EMBV3_19417 ACGGGGTGTACTGGGGCCTCACATCCCCAGAAACTTCTCTTACTCTAAAAAAAAAACCCC Gene GeneID:100337261|LOC100337261:XM_002697319:2_cdna Constitutive 0 NULL GeneID:100337261 23 GENE LOC100337261 NULL enterocytin-like EMBV3_39694 CACCTTTCTGTTGAAAGCGGTGCATTTTCGTGAAAGGATTCTTCAGCGGGGTTTGGTGGC Gene GeneID:100336467|LOC100336467:XM_002691158:203_cdna Constitutive 0 NULL GeneID:100336467 11 GENE LOC100336467 NULL acyl-Coenzyme A oxidase-like 1-like EMBV3_07075 CAAGCAAACACATGCACTGGTCTCCCTTGTGAAGAGTCTACCATGTCCCAAGCACTGCTG Gene BVT0102_277111 + 1 EMBV3_13432 GK000021.2:25816372-25913770 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15033 CACTGAATACAACCCAACCCAAGGAGTGAGGTTCGAGTCTTGCTGGCCAGCCCTGATGAA Variant GeneID:516107|RABL5:NM_001015612:191_cdna 155^244 2 EMBV3_13459 GeneID:516107 25 GENE RABL5 NULL RAB, member RAS oncogene family-like 5 EMBV3_42588 GTCATTGGTAAAAACTAGGTTTAAAGAGCTGAGCTACTATTTAAAGTGAGCTGTCCGGCC Gene GeneID:100297937|LOC100297937:XM_002698851:63_cdna Constitutive 1 NULL GeneID:100297937 28 GENE LOC100297937 NULL hypothetical protein LOC100297937 EMBV3_41477 TGGATGGTGGCACTTATGACTATCCTCCCACCACTCAGCTTAGGTTTTCATCTGGAATTC Gene GeneID:787442|LOC787442:XM_002687445:235_cdna Constitutive 0 NULL GeneID:787442 5 GENE LOC787442 NULL similar to olfactory receptor MOR114-12 EMBV3_05622 CAACGTCGTGGGTGTGTGAACACTGCTGGCACCATCTTGAAATGCTCAGTAATGCCTGGA Gene GeneID:534604|MID1:XM_002700433:14_cdna UTR3_Alt 2 NULL GeneID:534604 X GENE MID1 NULL midline 1 (Opitz/BBB syndrome) EMBV3_02692 TGTATTACCCGTTGGTGCTACGATCAACATGGATGGGACTGCACTCTATGAAGCAGTGGC Gene GeneID:282353|SLC1A1:NM_174599:44_cdna Constitutive 0 NULL GeneID:282353 8 GENE SLC1A1 NULL solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 EMBV3_16780 AGCTCCAGCAGTCCCTTCCATTTTTACGTTCCTGTGAATTTAGAATAGAGTGACAAATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40614 CCAGTGCCCCCTCCTCGGGCCACTGAGAATGTCTGCAAGGAGCTGGTCGACCTGCAGATC Variant GeneID:511835|CCDC78:XM_002697971:706_cdna 337^456 1 EMBV3_31678 GeneID:511835 25 GENE CCDC78 NULL coiled-coil domain containing 78 EMBV3_04252 GATGACGTCACCAACATAGTGAGGAGGGACGGTGGTACGTGTACCAGTTCCACCGCATCC Variant GeneID:613785|DNMT3L:XM_002685135:101_cdna 787^862 1 EMBV3_10513 GeneID:613785 1 GENE DNMT3L NULL DNA (cytosine-5-)-methyltransferase 3-like EMBV3_04360 GTCCTCCGTTGGGAGAACATGCTTGCAGAAGAGCCACACAATTGGACAGCTGACATGGAG Gene GeneID:540256|ZNF623:XM_002692553:186_cdna Constitutive 0 NULL GeneID:540256 14 GENE ZNF623 NULL zinc finger protein 623 EMBV3_09570 TTTGAACTTGTGCAGAGTGCTCAGAGAAAGCAGAGGTGGGCTTGAACCCTGAGCTTGGCT Gene GeneID:511008|EDEM1:NM_001103092:29_cdna UTR3_Alt 2 NULL GeneID:511008 22 GENE EDEM1 MGC165902 ER degradation enhancer, mannosidase alpha-like 1 EMBV3_41313 GCATGCCAAGAGAGAACATTCGACAGTATTTGTAAATCGGTAAACTTTATGGCCTGCATC Gene GeneID:530936|SLITRK4:XM_002699612:12_cdna Constitutive 0 NULL GeneID:530936 X GENE SLITRK4 NULL SLIT and NTRK-like family, member 4 EMBV3_28023 AGTCACAGGGTGCTCACTGGGTTTCTACTGCTCTCATGGGTGATCGGGCTTATCCATACT Gene GeneID:788129|LOC788129:XM_002690694:315_cdna Constitutive 0 NULL GeneID:788129 10 GENE LOC788129 NULL similar to Olfactory receptor 4K13 (Olfactory receptor OR14-27) EMBV3_31771 CTGTTATCATAAGGAAAGTCCCTCCCTTTCCTGCAGGGCTGTAAATTAAAGGATGGGTAG Gene BVV0102_220417 + 0 NULL GK000007.2:22985441-22993177 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212538 TCONS_00161155 2 XLOC_130213 XLOC_098047 Coding TCONS_00212538 XLOC_130213 Coding Coding KIF3A 7:22892052-22987657 j TSS159465 3767 1 TCONS_00212538_5 654 0.0286700292009557 18 0.960786159574913 0.00067270568843705 0.000443825178469493 0.000569400273939584 0.00050101989589212 0.000477373571331804 0.000399424058723324 0.00109515156741272 0.000567262311995723 0.00280700106386979 7.81094469741296e-05 7.15701703805803e-05 0.000176539324921071 0.000107482539585782 0.000401779550792326 0.000344352106757158 0.00038541695162129 0.00213811480349698 0.00046533362896407 0.000366405481436852 0.000297468806009701 0.000216190610820375 3.17698628113834e-05 0.00021644460076126 0.000475737882834469 0.000786500170632704 0.000472534359428691 0.000526769916538489 0.00017969550051177 0.000117377875126964 6.16166076895043e-05 XM_005209054.1 KIF3A PREDICTED: Bos taurus kinesin family member 3A (KIF3A), transcript 0.0 3690 100.00 0.542872312184762 NM_007054.5 KIF3A Homo sapiens kinesin family member 3A (KIF3A), mRNA. 0.0 3231 95.01 0.542872312184762 TCONS_00212538_5 sp|Q9Y496|KIF3A_HUMAN KIF3A_HUMAN Kinesin-like protein KIF3A; 0.0 1335 98.93 0.998470948012232 1 coding 1 1 1 1 0.235500151690641 0.499606287914159 -0.026554000611241 0.700319404206621 CTCCTGGCCCTGGGACTGTCCTGGCGCGCTGGGGCCCACTCCTCCCGGCCCTGGGACGCGGCGGGAGGGAGAACGCGCAGATTTTGGCTGTACCATGTGCCATGTGGGATCTTAGTTCCCTGACCAGGGATGGAACCTGCATCCCCTGCATTGGAGAGCAGAGTCCTAACCACTGGATGACTGGGAAAATATCTGAAGATCAATAAATCAGAGAAGCCGGAAAGCTGCGATAATGTGAAGGTGGTTGTTAGGTGCCGGCCCCTCAATGAGAGAGAGAAATCAATGTGCTACAAACAGGCTGTCAGTGTGGATGAGATGAGGGGAACTATCACTGTACATAAGACTGATTCTTCCAATGAACCTCCAAAGACATTTACTTTTGATACTGTTTTTGGACCAGAGAGTAAACAACTAGATGTTTATAACTTAACTGCCAGACCTATTATTGATTCTGTTCTCGAAGGCTACAATGGGACTATTTTTGCATATGGACAAACTGGAACTGGGAAAACGTTTACCATGGAAGGTGTTCGAGCTGTTCCTGAACTTAGAGGAATCATTCCAAATTCCTTTGCTCACATATTTGGTCATATTGCAAAAGCAGAGGGTGATACGAGATTTTTGGTTCGAGTGTCTTATTTGGAAATATATAATGAAGAAGTTCGTGACCTTTTGGGCAAGGATCAGACACAGAGGTTAGAGGTGAAAGAAAGACCCGATGTGGGAGTTTATATCAAGGATTTATCAGCTTATGTGGTCAATAATGCTGATGATATGGATAGAATTATGACACTGGGCCACAAGAATCGTTCTGTTGGTGCAACTAATATGAATGAACATAGTTCCCGTTCCCATGCCATCTTTACAATCACGATAGAATGCAGTGAGAAAGGTGTTGATGGTAACATGCATGTCAGGATGGGGAAGCTTCATCTTGTAGATCTTGCTGGTTCAGAAAGACAAGCAAAAACTGGAGCTACTGGACAGCGCCTAAAAGAAGCTACAAAAATCAATCTTTCGCTTTCCACCCTTGGTAATGTTATTTCTGCCTTGGTTGATGGAAAAAGCACTCATGTGCCTTATCGTAACTCTAAATTGACTCGTCTTCTTCAGGATTCCTTAGGAGGAAATTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGATTACAATTATGATGAAACCATCAGTACATTGCGGTATGCTAATCGTGCTAAGAATATTAAAAATAAAGCTAGAATTAATGAAGATCCAAAGGATGCTTTGCTTCGTCAGTTTCAGAAGGAAATAGAAGAACTGAAAAAAAAGCTTGAAGAAGGGGAAGAAATATCAGGCTCTGATATCAGCGGTTCAGAGGAAGAGGATGATGAAGAGGGTGAGGTTGGAGAAGATGGAGAGAAAAGGAAAAAAAGAAGGAGTAAAAAGAAAGTTTCCCCAGATAAGATGGTTGAAATGCAAGCAAAAATTGATGAAGAGAGAAAAGCACTTGAAACAAAGCTTGACATGGAAGAAGAAGAAAGAAACAAGGCTAGAGCTGAGTTGGAGAAACGGGAAAAAGATCTTCTTAAGGCCCAACAGGAGCATCAGTCTTTGCTAGAGAAATTATCTGCACTGGAGAAGAAGGTAATTGTTGGTGGTGTTGATTTGTTGGCAAAAGCTGAGGAACAAGAGAAACTTCTTGAAGAATCCAACATGGAACTGGAAGAAAGGAGAAGAAGAGCAGAGCAACTTCGTAGAGAACTTGAGGAAAAAGAGCAAGAACGCTTGGATATTGAAGAAAAGTATACCAGTTTGCAAGAAGAAGCACAAGGAAAGACCAAGAAATTAAAGAAAGTTTGGACTATGCTGATGGCTGCAAAGTCAGAGATGGCTGATCTCCAACAAGAACATCAGAGGGAAATTGAAGGCCTCTTGGAGAACATTCGACAACTTAGCCGGGAACTGAGACTTCAGATGCTTATTATTGATAACTTTATACCTCAGGATTATCAAGAAATGATTGAAAACTATGTCCATTGGAATGAAGACATAGGAGAATGGCAGCTAAAATGTGTTGCCTACACAGGAAATAACATGAGAAAGCAGACTCCAGTTCCAGATAAAAAGGAGAAAGATCCCTTTGAAGTGGACCTTTCTCATGTGTATCTCGCCTATACTGAGGAAAGCCTTCGGCAGTCCTTGATGAAATTAGAGAGGCCACGGACTTCAAAGGGAAAAGCAAGGCCAAAGACTGGGAGAAGGTAAGAAGAATTGGATTTAACTAACAGCATTCTCTTTGTGATATGCAAGATAGTTAGACATTTATAACTTTGTGGGGCATTGTTTAGATACTGTGAAGACTTGAGGTGAACTTATGTCTTGTAAAAGCTTTGTGTAACCAGAATATCTTGGGAGTTATAGATGCACATTTAAGTCTATTAGTAATTAGAGAAATCTTAATTTTACCAGTAGAAAAAAAAATGACTATGTCTTTTTTTTTTTTTAAAGTCCACAGGTCTAGCCTTTAACCATCCATTTAATAGAAGAGGGATAACTTTTGCATTAAGCTTTAAAACATTAAGGAAAATTTAAGTCAGCATCTTAGATATTTTTCTTTTCCATGTCACTGCAGTAACAAAAAGAAAGCTATAAAAAGTCAAAACTTTGATAAATTTTAAAAATAGGCTGCTTTAGCATTATATTAGAACTGATATCAAGATTAGATATTGGAGCCAGGCCTGAGTCCCCATGTGAAAGCATGGGAACCTAGCGTTAAAGCTGTTCACTTAGCTCCAATCATAGCAGTCCTGTGGTTCCTTCACATTTACTTTGTGTCATTGTCCACAAATGAAATATTTGTAACTTCAGTGTTAGTTTCATGAAAAGATAGATAAATTTGCTCATTATTTGAAATAAGAAACATTTAAAATGAGTGTCACATATAAGTAGGTTATTGAATGTGAATGGCGATTTTTTCTCTTTAATTTAAAAAAGTAATATTTATTAAGAGGAGCCTTGGTAGAATGTTGTTTGTGGTATGTTCTTTAGTAAACCTTGCAAATATATGTAGTAATAACTGAGATATTAAAATATGATAGTATTCCCCATTTCTGTTTAGATTCTTGTGAGGTGTAGGGTAATTAAGGTGGGAGGTTTACCTCCATGTGTTCGTCCCACAAGTAGAATCAGTTTCACATGCTGTGTCATCTATTTTTTGAGAAAAAAAGGACCTTTTTTTGCTGCACGAAATTTAAGGTTACTTTGGGGGAGAGGGTGGTGCTACTTCAACTAACATTTTTTTTTAAATTACGATTGTAGCTTTAGTTTGTTGTGTTTCTTTTTCATCTTTTAATAACATTTTTCCCTTAACTGTTATCATAAGGGAAGTCCCTCCCTTTCCTGCAGGGCTGTAAATTAAAGGATGGGTAGAGTTTACATTTAAGTACGTCAGTGTCTGCCCAGTTTATTAATGTATGCATCTGTGTTCCTTTTTAGTTACTCTTTGATATAAATGCTAGACTAAAACATAGATCTTCCTAGTGCCTTTGAACTTCTACTGTAGTCTAATTGAAATCATCAGTAACTTCAATAGCATTACTACAATACTGTATACTGGCCAGAATTACAAATTGTATGATGAGTTTGTTGCATTAATTTCAAAAGCCACACTTTAACTGTATTTTATGTATAAATTGTATTTGTTCAAGTTGTATATATTAATATTGTATGTATACATACAGCACGCTTAAGTAAGAAATAAAAATCTTTAGCCTAATGCCTGTAAT EMBV3_03898 CCAGGGGCTCTGAGGACAGAAGCAGTGAGAAGAAAACTGCAATTGGTTGCTTTGGAATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38852 GCCCAGAGGCCTTCAGCCCTCAAGTCTTGGGAGCTGGTGGAGGTTCCATGCCTGGAGCCT Gene BVV0101_030459 + 0 NULL GK000020.2:71318131-71394200 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08756 CCCTCGCGGCCCTGTGCTGCGGTGTGACGGTTGTGCCAGAAGATTCCAGGATGACTGAAG Variant GeneID:100174923|LOC100174923:NM_001143745:8_cdna 708^752 1 EMBV3_26995 GeneID:100174923 2 GENE LOC100174923 NULL hypothetical LOC100174923 EMBV3_39259 GAAAAGGAAGATGAATCCCTGCCAATAGATGACATTTGACACACTAAGGAATCACCCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38043 GGGCTCGATAAAGGACATAAATGGATGGACCTAACAGAAGCAGAAGATATCAAGAAGAGG Gene BVT0101_071894 + 1 EMBV3_13300 GK000005.2:59142180-59158472 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14155 GAAATATGAGTGGGCAAGTGGCATCAACATTGGGACCTACAAAGCCAGATTGCTCCCAGG Gene GeneID:100300877|LOC100300877:XM_002683864:3_cdna Constitutive 0 NULL GeneID:100300877 X GENE LOC100300877 NULL similar to X antigen family, member 5 EMBV3_14694 GATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGG Gene GeneID:100301168|LOC100301168:XM_002693923:2_cdna Constitutive 0 NULL GeneID:100301168 16 GENE LOC100301168 NULL similar to high-mobility group box 1 EMBV3_03293 CAGCTCCGTGAACTACAGCGTCATGGCTATGAGAACCCCACCTACCGCTTCCTGGAGGAA Gene GeneID:513154|APLP1:NM_001038095:613_cdna Constitutive 0 NULL GeneID:513154 18 GENE APLP1 MGC128451 amyloid beta (A4) precursor-like protein 1 EMBV3_34867 GGTCCTTCCTGAGGGATCTCGAAGACACTTTTCCTGCACTCTGACTCATTGCTCAGTACT Gene GeneID:532242|RFNG:XM_002696134:264_cdna Constitutive 1 NULL GeneID:532242 19 GENE RFNG NULL RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase EMBV3_03325 CATGGAAGGCGACGAGGTCACCTATAAGATGTGCTCCATCCCGCCCAAGAACGAGAAGCT Gene GeneID:506760|CARHSP1:NM_001045951:78_cdna Constitutive 1 NULL GeneID:506760 25 GENE CARHSP1 MGC137010 calcium regulated heat stable protein 1, 24kDa EMBV3_21413 CGGCATGGGCCTGCACTACGTCGCCTTCAGGAAGCTGGAGCAGTTGCATCGTAGCTTCAT Variant GeneID:533579|DNAJC4:XM_002699326:169_cdna 556^675 1 EMBV3_17677 GeneID:533579 29 GENE DNAJC4 NULL DnaJ (Hsp40) homolog, subfamily C, member 4 EMBV3_06610 AAGCGCCGGAGGGTCTGCACCGAACTTCCAGAGAGTAAACCATTAATTTGTGTCGCCAGA Gene BVV0102_197386 + 0 NULL GK000025.2:41533976-41535262 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145650 TCONS_00145652 1 XLOC_088894 Coding TCONS_00145650 XLOC_088894 Coding Coding FTSJ2 25:41527718-41535127 = TSS109101 2946 1 TCONS_00145650_3 244 0.233536999321113 3 0.602726781857451 0.000867045683984215 0.000801495309999656 0.000178875814691543 0.000111099387662765 8.96701301794193e-07 8.90365082167193e-06 0.000377652573806008 1.23839351350075e-18 3.27879421958897e-05 0.000349183883093185 4.69045956265718e-10 2.2472179039254e-11 1.05893812962799e-17 2.65813854100014e-18 7.56516608506472e-05 1.95670567085966e-22 2.42811098070579e-14 5.49703940616967e-22 0.000566427162599551 0.000687509462406228 3.53928251542387e-05 5.46971672067877e-52 4.56529297799495e-25 1.14006968576239e-40 9.90870838752362e-05 0.000176649716533419 3.61055905541766e-05 1.16284964019616e-12 3.02450445504485e-48 6.2071768428674e-41 NM_001191258.1 FTSJ2 Bos taurus FtsJ RNA methyltransferase homolog 2 (E. coli) (FTSJ2), 0.0 3223 100.00 0.606245756958588 NM_013393.1 FTSJ2 Homo sapiens FtsJ RNA methyltransferase homolog 2 (E. coli) (FTSJ2), mRNA. 0.0 839 85.22 0.252206381534284 TCONS_00145650_3 sp|Q9UI43|RRMJ2_HUMAN RRMJ2_HUMAN Putative ribosomal RNA methyltransferase 2; 5e-151 426 84.71 0.987704918032787 1 coding 0 0 0 0 0.659467952857517 0.437916524661092 0.0201566205015858 0.697121050030467 GGCCGGTACTTCCGGTGGCGACTGCCGGAGCGGGTCCGCGTCGATGGCGGGGTCCTTGAAACTGGTGTGGGCTTCCCTTCAGCGTCAAAGGTTCCACACCACTGGGAGTTGCTACAAGAGCCGGACTGGCGCTGAGCACCTGTGGCTGACGCGGCACTTGAGGGACCCGTTTGTGAAAGCTGCGAAGGTGGAAAGTTACCGATGTCGAAGCGCATTCAAGCTCCTGGAAATGAACGAGAGGCACCAGATCCTACGGCCTGGCCTCCGGGTGTTAGACTGTGGGGCCGCCCCTGGCGCGTGGAGCCAGGTGGCCGTGCAGAGAGTCAACGCTGCAGGCACAGACCCCAGTGCTCCTGTTGGCTTTGTGCTTGGGGTAGATCTTCTTCACATATTCCCCCTGGAAGGAGCAACGTTTCTATGCCCTGCTGATGTGACTGACCCTAGAACCTTCCGGAAAATCCAAGAGCTGCTTCCTGGTGGGAGAGCAGATGTGATCCTGAGTGACATGGCACCCAACGCCACCGGGATCCGCAGCCTCGACCATGACAGGCTCATTAGCTTGTGCTTGTCCCTTCTGGACATGGTTCCAGATGTCCTGCACCCTAGGGGGACATTCCTTTGTAAAACCTGGGCTGGAAGTCAGAGCCAGCGGTTACAGAAGAGACTGACTCAGGAATTCCAGAACACAAGGACTGTAAAGCCCGAGGCCAGCAGGAAAGAATCATCAGAGGTGTACCTCCTGGCCACACAGTACCGAGGGAAGCCAGGAGGTCTGTGAAGGACTGAGCGCGTGTTCTGCTGTTTCTGGCTCTTCATTGCAGATGTAGCTTGAGCTCTGTCCTGAAGTGTGGCCAGGGAGATATGAGCTGGATCTAGGATGCAGCAGGCAGGACAGATGGGGCACCTTTTTTTAAGACAAAACTATATTCATTGTTGACGATATATGACTATTTATGATTAAAAAAAATGATCGCTATAATATGATTTGTGAAGAGGAGTTACCATGAGAAAGAGACAAAGATAAAAGGATGAAAAGACTGGGATGCATAAAAACACTGAGGCAGAGAAACACACAGACACCTCTATGGAATTTTCTCACCATGGTTAGTATGTTACAGAGGAACTGGCTTCCACCGTCCCCGCAAAACGACCCCAGGTTTCCAGGTGTTATTTTGTGTATACAGTGTAATGTAGAAAAATCTGAACCTTCAGTCTGGGGATTTGTTTCCATCTCTGTGGTGAATGATCCGGAAATACTTCAAGCAGTGAGAGCTCCTTAGGGAAGACATTTGGTATGAATTATGGAAGGGGGGCAGACAGTGTGAAACTAGAAATGTTTCTATAACACGCCAGGCTCCAGAGACTTAAAGGTAATAACCAAAGCAAGCAGACACATGGTGTGTTTATTTCCTTTTACTCTCTTCCAGGAACTCAAGGTTATAAAACAGCATAGGGTGTAATATTTTCTGGAATTTCCATACTTTAAAAAAAAATTGATTTCTTTGAAACCATTTTCTGGAGGAGTGGTCATCCCTTACGAGTGTATTGACTGTAATGATAATTAAATCTTGCCTATTGAAAACAAACACACAACCTAAAAACCTGGGAGATATTTTTATTTGGCAGATAAAACTGGGGACTTAAGCCTGGGACATAGTATCTCAGGTAACTCTGAGGGACTGCCCTGAAGAGGTAGAGGAAGAGCTGGAGTATATAGGAATTTTCGGAACAAAACCAGGTACTTGGAACATCAAAAGATTTATGGTTAATAAACAAAAGACTAGGTGTCTCCAAGAATTCAGTGCTTTCCTATGTGTGGAAAGATGCAGGAGTCTTAGGCTCACTGAAATTGTTCCTTTGATGCGACCTCAGCTACCTGGGCCCAGTGTCCTGTGCTTTCTCACCCTGAGTCTCCTCAGGGTTCACTGTCAGGGTTGGAGGTGGGGTGGCGGCAGCTGCAGAGTCTGATGATTTCGTGGCTGGCATTACATTTGGGGGCTTCCCTGGTGGTTCAGTCAGTAAAGAATCTGCCTGCCATGCAGGAGACCCATGTTCAGTCCCTGGGTTGGGAAGATTGCCTGGAGAAGGGGATGGCTACTCACTCCAATGTTCTTGCCTGGAGAATCCCATGGACAGAGGAACATGGCCCACTACAGCCGTGGGGTCAGAGTGAGACGACTGAGCAACTGACCTGTTTTCACCCTGAGCTCATCCTCATGAGTGGCTGATGGCTGCAGCATTCTTTATTTACTGATAGGGCAGGCAGCATTTTTAGTTCACACATCCCAAGGATGGCTGGGGGAAGAAATGGGGTCTAAGGGTAGTCCAGATCCCCAAAGTAGTCTGCGGGCCGGCCTTATAAAAATTTTTTTTATCTTATTTTCACTGCCCCGTGTCCTACCTCCACCACCACATTCTTTGCCTCTGCATCCTTTTTCCTCTGGCGACACAAATTCATGGTTTACTCTCTGGAAGTTCGGTGCAGACCCTCCGGCGCTTCGCCGGGTTTGTGGAGGAGGAAGAAGGGACTTGAGAGACCCGTTAGTAGACGCAGGCTGCAGAGATTGCAGGAAGGGCCTGCTGGTTGTGGGCTGACCGCGCCCCGCCCTTGCTCCCTGGAGAACGGGACCCAGACGACGGCTCCGCACCCCAACAGCTCTCAGGGCGCTAGGAGGATAGCTTAGTCGCATAGTATTTCCTGTTTTTCTTTTTTTTAGAGAAAAGTAAAAACGCATTCATTAATTCAAGCAAACACCGTAGTGGCAAAAGCTGCGGACTAGTCAGGACTGCAAGGAAGTTTGGCCCCAGGAGGCCACCGTTGGGCGGTGCTGTTCCACGGAAAACAGTGCGAGACAGCCGTCCAGTGGAAGCCCGGCCTGCGGCGGACAGGGGCACCAAGGGAGTCCCGCGGGCCGGCCTTTGGCTCTGAGCGTTCTCCGAGCCGCG EMBV3_10680 AGAGGGTCGGTGTCTGTGATAACGGGGTTGCTTGTCTTACCACAGCACAAGACAAGAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14509 GTCCCCATTGCTGGTCAGCCAGGCCAAGACGAAGCTCTTAAGTTGTCCAAAACCCACAAA Gene GeneID:768069|C8H8orf74:NM_001077126:18_cdna Constitutive 0 NULL GeneID:768069 8 GENE C8H8orf74 C8orf74 MGC133850 chromosome 8 open reading frame 74 ortholog EMBV3_35598 TGCATGTCTGTTCTTAACACTGGCTTTCCAGGAGCCATATAAACCCAAACTCTTCTAATC Gene BVV0102_165460 + 0 NULL GK000011.2:69618486-69688035 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09406 CACAAGCAGGGTACCTATGGTGGCTACTTCCGAGACCAGAAAGACGGCTACCGGAAAAAT Gene GeneID:534882|EIF3C:NM_001034618:365_cdna Constitutive 1 NULL GeneID:534882 25 GENE EIF3C EIF3CL EIF3S8 MGC127304 eIF3-p110 eukaryotic translation initiation factor 3, subunit C EMBV3_09817 GATGACGAAGAGGACGAGGATGAGGAAGAGTATGATGAAGATGCTCAGGTAGTGGAAGAC Gene GeneID:538427|ANP32A:XM_002690484:420_cdna UTR3_Alt 2 NULL GeneID:538427 10 GENE ANP32A ANP32D HPPCn LANP acidic (leucine-rich) nuclear phosphoprotein 32 family, member A EMBV3_16283 CGCAGAGACATCAATGGGGATCACAGCAGGAAAGTCGGTGCTGGTGCTTCTTGCCTTCTT Gene GeneID:281240|IGF2:NM_174087:212_cdna UTR3_Alt 2 NULL GeneID:281240 29 GENE IGF2 MGC140034 insulin-like growth factor 2 (somatomedin A) EMBV3_30178 GAGATGCAGTGTTTCAGCATTGAGCAGTACGGGTGGTGCTGTGTTTATAGGCTGGTCAGA Gene GeneID:616058|SNAPC5:NM_001046573:272_cdna Constitutive 1 NULL GeneID:616058 10 GENE SNAPC5 MGC138130 small nuclear RNA activating complex, polypeptide 5, 19kDa EMBV3_35027 GCCTAACTCTGGTCCCAGCTCTATTGCCAACTTGCTATGTGGCCTCGAACAGGTCATCAA Gene GeneID:520694|LINGO1:XM_002696672:302_cdna UTR3_Alt 3 NULL GeneID:520694 21 GENE LINGO1 NULL leucine rich repeat and Ig domain containing 1 EMBV3_19230 AGTGGGTGAAGGAGTGTGTTGGGGACAGAGATCACGATCTCATGAAACAAGGGCTGCTGA Variant GeneID:533086|HSD17B6:NM_001035395:1064_cdna 374^796 1 EMBV3_06072 GeneID:533086 5 GENE HSD17B6 MGC127926 hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse) EMBV3_05003 GAGGACGCCTGGATGGGCACGCACCCTAAGGATAAGGGAAATCTTGAAGGCGTCACGAAA Variant GeneID:614118|TSEN15:NM_001076312:29_cdna 186^403 4 EMBV3_00243 GeneID:614118 16 GENE TSEN15 C16H1ORF19 tRNA splicing endonuclease 15 homolog (S. cerevisiae) EMBV3_02778 GGCTGTTCCACATCTTTGTTGAGGCCTGTGGGATCTTTAGTTGTGGCATGCGGAATCTAG Gene BVT0101_028538 + 0 NULL GK000023.2:12066122-12124682 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09395 AACACAGTAGAAGGTTCTTCCAAACGCCTAATGTTAGACCCACACCCCAACCCCAAGTCC Gene GeneID:100125775|IGSF1:NM_001105048:71_cdna Constitutive 0 NULL GeneID:100125775 X GENE IGSF1 MGC166242 immunoglobulin superfamily, member 1 EMBV3_10554 TAGTTGAGTGCAATTCCCAGCGGACACAGACTCCTGGGGCAGACGGATAGTAACTCTGAA Gene BVV0102_130132 + 0 NULL GK000018.2:51357468-51361687 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15659 TACCTCATCTGGCCCTGGTTTGAACGTCTGGAAGCTCTGGAGTTGAATGAGTGTGTAGAC Gene GeneID:505642|GSTO1:NM_001075214:75_cdna Constitutive 0 NULL GeneID:505642 26 GENE GSTO1 NULL glutathione S-transferase omega 1 EMBV3_16116 TTTAATTCTTGTCCTCTCCTTGTTCTCCCTTCACCACCCCCAGTTGGGACGGGCACATCT Gene BVT0102_269737 + 1 EMBV3_16894 GK000004.2:29575558-29595418 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183519 TCONS_00183518 1 XLOC_111165 Coding TCONS_00183519 XLOC_111165 Coding Coding SP8 4:29593436-29597808 = TSS136914 3371 1 TCONS_00183519_3 462 2 0.229238160603981 2.02275841112702e-05 1.48363073854136e-05 0.000107924339723926 2.85379900408479e-05 5.12332574304009e-05 5.42038427422681e-05 9.32684344644871e-06 5.5017666497532e-12 2.57025475195777e-05 0.00016247126748745 1.97565077652221e-10 8.66739425796454e-06 1.26965385283325e-05 8.93512512873545e-05 1.26443095345773e-05 7.69723354300128e-05 2.3606696442623e-11 3.59186024639197e-11 1.87507814166634e-05 0.000208330621632849 1.47068179665906e-06 0.000134791000714576 3.17007184625724e-05 3.47219318248041e-05 8.53649879864772e-05 8.44278365891886e-05 1.72652718512968e-05 6.26329361417055e-05 4.37314736246527e-11 0.000106382763513137 XM_002686706.2 SP8 PREDICTED: Bos taurus Sp8 transcription factor (SP8), mRNA. 0.0 5627 100.00 0.925244734500148 NM_198956.2 SP8 Homo sapiens Sp8 transcription factor (SP8), transcript variant 2, 0.0 3555 85.54 0.924058142984278 TCONS_00183519_3 sp|Q8IXZ3|SP8_HUMAN SP8_HUMAN Transcription factor Sp8; 0.0 716 88.37 0.958874458874459 3 coding 0 0 0 0 -0.243690072335923 0.309289568847371 -0.0701538049882188 0.233040386892056 ATGGCAACTTCACTTCTAGGGGAAGAACCGAGGTTGGGATCGACTCCTTTGGCCATGCTTGCTGCTACCTGTAATAAGATCGGCAGCCCCAGCCCGTCTCCCTCCTCCCTCTCGGACAGCTCATCTTCCTTCGGCAAAGGCTTCCACCCCTGGAAACGGTCCTCGTCCTCTTCCTCAGGCAGCTGCAACGTAGTGGGCTCCAGTCTCTCAAGCTTCGGCGTGTCAGGGCCCTCCAGAAACGGCGGCTCGTCCTCGGCCGCGGCGGCGGCCGCCTCGAGCTCTCCCTTCGCAAACGACTACTCGGTGTTCCAGGCCCCTGGCGTGTCGGGGGGCAGCGGCGGCGGCGGTGGCGGCGGCGGCTCCTCGGCACACTCGCAGGACGGCTCCCACCAGCCCGTGTTCATCTCTAAGGTGCACACCTCTGTGGACGGGCTGCAGGGCATCTACCCGCGCGTAGGCATGGCGCACCCTTACGAGTCGTGGTTCAAGCCCTCGCATCCCGGCCTGGGCGCCGCCGGCGAAGTGGGGTCGGCAGGCGCCTCCAGCTGGTGGGACGTGGGCGCGGGCTGGATCGACGTGCAGAACCCGAATGGCGCGGCGGCGCTGCCCGGCTCCCTGCACCCCGCCGCCGGGGGGCTCCAAACCTCGCTGCACTCGCCGCTCGGAGGCTACAACTCGGATTACTCAGGCCTGAGCCACTCAGCCTTCAGCAGCGGTGCCTCTTCGCACCTGCTCAGCCCCGCGGGGCAACACCTCATGGACGGCTTCAAGCCAGTGCTGCCCGGCACCTACCCGGACTCGGCCCCGTCGCCGCTGGCCGGCGCTGGGGGCTCCATGCTGAGCGCGGGGCCGTCGGCGCCTCTGGGGGGCTCCCCGCGCTCTTCAGCCCGCCGCTACTCCGGCCGCGCCACCTGCGACTGCCCCAACTGCCAAGAGGCGGAGCGTCTGGGCCCGGCCGGGGCGAGCCTGCGGCGCAAGGGCCTGCACAGCTGCCATATCCCGGGTTGCGGCAAGGTGTACGGCAAGACGTCGCACCTCAAAGCGCACCTGCGCTGGCACACGGGCGAGCGGCCCTTCGTGTGCAACTGGCTCTTCTGCGGCAAGCGCTTCACGCGCTCCGATGAGCTTCAGCGGCACCTTCGGACCCACACCGGCGAGAAGCGCTTCGCCTGCCCCGTGTGCAACAAGCGCTTCATGCGCAGCGACCACCTCAGCAAGCACGTGAAGACGCACAGCGGCGGCGGCGGCGGCGGCTCGGCGGGGTCCGGAAGCGGCGGCAAGAAGGGCAGCGACACCGACAGCGAGCACAGCGCCGCAGGCAGCCCGCCTTGCCACTCCCCGGAGCTGCTGCCGCCCCCCGAGCCCGGGCACCGAAACGGCCTGGAGTGACGTGCACCCCGCCCCTGCCCCTCTCCCCTTCCTCCTCCCACCTTGGTCCGTTTGGGCTTCGTGGGTCCTGGCTTTGGCTTCAGTCTCTTTCCACCCTGCTCAGTATGTCTTTCTGTCTCTGCCCTTCTCTCTTTTAACTCTCTCTGTGACAACTTTGTAAAGGGAATGTGGACATGTAAGTAACACGCGTTGCTCTCCTGGGCCCTAGCTGTCTCTCTACCCGATAACACCGTTGGGGCCCAGAACAGCCCCAGCCGGCCCCTCGGCAGGCCTTTAATTCTTGTCCTCTCCTTGTTCTCCCTTCACCATCCCCAGTTGGGACGGGCACATCTTTTAGAGGGAAGTGGCCGCTGGAGGTAAGGCTGGACCGATCCAGTGCCTGGGACCCCGGGCCTCCGAACGCGCGGTTAACCACTAGGCTGAGCAAGTTTGAGCGCCACCCAGGGCCTCCGGGGCAGGCCAGCCGCCGACTGGCTAGGTACCAGTACCAGAACCGTGTTTTCGGGCGTCTGAGTTGCTGAGCGCCCTGCCCTGCAGCCGGGCGTCGCGGCCTGCCCTTCGCAGAGCTGTCGGGTGCCCATCTCGGACACGGAGACCCGGAGTTTGTCTAGTTCAGCTCTCCAACGCCAGCCCTGACTCTTTCCCTTTGTTCCCTGGGGTGGAACCGATGCAAGTTTTAGCTAAGGGCAGTTTTGGTGAATCGATGCAACAGCCTTCTTTAATCTTTATAACTTTTTTAAACGGAAAATCTAAAGAAAACACAACAGCATCCTTCTATTTGGTTTCCCTTGTAGGTAGTTTTTCCTCTATCAGTAAGCAAGTCTTTCTCTCAAAATTGTGCTAATATTGATCCCAAAGTTATTTTGATCGCATTAACTTAACTTATGAGGTTGGGGGTGGGGGTGAGGGTAGGTGTCTTTTTCTTATGCAAAAATACCCTTTTCCGGTGAGACCAGATTAACTATCTCTGTGTTTGTCCTTTGCTACCTCGTTTTCACCACTCCCGAGCATAATCTCTCTCTCTTTTTTTTTTTGCTAGTCCAGCAGTCAATTTGTATAGTACCCATTTCTGTAAATTCTTGCAATTCGTTGAAGATTCTTAGGGTTTAACTTTTTTGTGTGTGATTTAAACTTATAAACAAGTAAAGAAGCTATTGTTTATTTCGGACCAGGCTGTAGTTTAAATGCCAAAAGGGAAAAACAGAAAAAAATTGTAAGATTTATCTGAACCTAATGGTTTGTACAACGGGAGAATAGTTCTAGATTAGGTATCGATTAACTATAACTCCACCAGTGTATGGGTGCGAGGTGCAGTTGTCCAGGAGACGATTTTGTATATTATTTTTCTTGTACATTATTTCCAGTAAATATTTGAAAATATATTGAAGTAAACTTGATTTTTTTTTTTTTTGGTCACAAGAAAATATTAAGAGTTATTCTTGCAGTTCTGATGAGCTGCAGATTTTTTGAACTCACTTCTGGAGGTGCAGAGCCACAAACGCACTTTCGGGGCCTAGTTTTGCTCGAATATGAATTTAGATAGGTATCAAACTGTAACTAAGACAATATTTGATAAATGTGGGATGACACTTAATTTAATGAAGCATGTACTTACTTGCATTTGCTGGCAGTTCAGGCATAGTTAAAGTGAGAGTACTCTTATATTTCATAATAACTGGGTCTGCCAAAAACCCATGTGTTAAATAAAATGTCCAAGTGAATCTCAACTAACTTTGGCCTCTGTGTATTTCCTGAAGGTAATATTGTTAACTGTTAATAATAAACACTCCTGACACTACATTTAAATGTTTGCAGATTCTGCAAACTAATTGCTCATTGTAATGTTGAAATAATTTGGATATTTCACATTGAAATGAAAAGCCTTTCTCTGGAACATTTTAGACTTGCATTTTAAATGCATGAAATGTAATTGATTTATTTGTAATATTTTAAATGGTATTAATAAACTCAGATAAAGACTA EMBV3_12729 GCACAGTCTCCCTCCATCGAGCCCCTGTATATAACCTGGAGTGTGTTACCTTCAGACCTT Gene GeneID:538483|LOC538483:XR_084609:480_cdna Constitutive 0 NULL GeneID:538483 18 PSEUDO LOC538483 NULL similar to Protein capicua homolog EMBV3_27560 GACCAAAGATGAACATCTTAACAAAGACCGGAAGCAATGAAGCAGCTAACCCAGCTCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01645 GCAGTCGAACAGTCAAGTGCAGTGTTACTTTTGATGTCTCTTATTTTGCAGCTGGGCCAG Gene GeneID:533298|KIAA1715:NM_001075989:25_cdna Constitutive 0 NULL GeneID:533298 2 GENE KIAA1715 MGC139734 KIAA1715 EMBV3_01748 GTCAGTCAGAACTGGCAGGAACTTGAATTGGGTTGGAGAACACAGCTGCCACTGAGCCAT Gene GeneID:527591|LOC527591:XM_002694127:480_cdna Constitutive 1 NULL GeneID:527591 16 GENE LOC527591 NULL similar to solute carrier family 35, member E2 EMBV3_26740 AGTTCAAGCAGGGCTCGGTGAAGAACTGGGTGGAGTTCAAGAAGGAGTTCCTGCAGTACA Gene GeneID:519403|ARC:XM_002692568:241_cdna Constitutive 0 NULL GeneID:519403 14 GENE ARC NULL activity-regulated cytoskeleton-associated protein EMBV3_37539 TCACCACGCCTCTGGACGTGGCCAAAACAAGAATCATGTTGGCAAAGGCTGGTTCCAGCA Gene GeneID:614713|SLC25A26:NM_001103297:62_cdna UTR3_Alt 6 NULL GeneID:614713 22 GENE SLC25A26 MGC166132 solute carrier family 25, member 26 EMBV3_26795 CTGTTACCCTGGGGACTCAAGAAGATATTGACAAAAAGCTAGAGGACTGATTGAATGCCC Gene GeneID:100140002|LOC100140002:XR_084188:2_cdna Constitutive 0 NULL GeneID:100140002 6 PSEUDO LOC100140002 NULL similar to envelope glycoprotein EMBV3_36486 GGAATGTATCACTTGGGGAAGGTCTCCATCGGCAATCATATCTGTATATAAAATTTGGGG Gene BVV0102_179573 + 0 NULL GK000005.2:77560759-77608602 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195661 TCONS_00195656 TCONS_00195658 TCONS_00195662 TCONS_00195663 TCONS_00195660 TCONS_00195657 TCONS_00195659 1 XLOC_118115 Coding TCONS_00195662 XLOC_118115 Coding Coding FGD4 5:77603230-77833317 j TSS145766 8723 1 TCONS_00195662_5 947 0.0229278917803508 17 0.962161974218336 0.000668648286346389 0.00135252409211366 0.000738051551206604 0.000533898385669193 0.000529397840127309 0.000443121854141956 0.00076443495089407 0.000372962712983257 0.000969095674522354 1.33298162485664e-06 5.53717685380425e-05 6.93715083000306e-05 0.000192535457365947 5.20130985771401e-05 0.000156225766203136 0.00269606147215714 0.00352534401363495 0.00241615455546147 0.000773890887208383 0.00040607815175486 0.000179524065925776 0.000277394705482277 0.000751861333600257 0.00080559608483138 0.000834806172736021 0.000526343698816698 0.000489799663335472 3.61140302274166e-05 7.87617258356573e-05 0.00013906046496451 XM_005206884.1 FGD4 PREDICTED: Bos taurus FYVE, RhoGEF and PH domain containing 4 (FGD4), transcript variant X4, mRNA. 0.0 1.543e+04 100.00 0.9803966525278 XM_005253304.1 FGD4 PREDICTED: Homo sapiens FYVE, RhoGEF and PH domain containing 4 (FGD4), transcript variant X1, mRNA. 0.0 4731 85.59 0.462226298291872 TCONS_00195662_5 sp|Q96M96|FGD4_HUMAN FGD4_HUMAN FYVE, RhoGEF and PH domain-containing protein 4; 0.0 1438 90.21 0.80675818373812 4 coding 0 0 0 0 0.763005110822277 0.110668414902957 -0.111428432219926 0.129499936993691 GCGGCACAGCGCGTCCTGGGCTACTGCCCGGGAGAGACGAGGAGGAGGCAGCAGCAGTGGCGCCCACAGGCCGAGCTGTCGGCGCTCTTGGGGGTCTGCCGGTGATTGATCCAGAGAGGAGTGGGTGGCGGTAGCCAGAACCCGCCGCTCTAGCGGCGGCGTCAGGTGAGAACGCTAGCCGCAGACTCGGGCGTGGCGGCTGCCGCACAGGGAGTCGGAGCCAAACTCGCGGCGCGGCCTTGCACGTCCTGGGAGGAAGGGACGCGGAGACACTTGCAGACGACTCGAAGCAGAAGTTACCCCTGTCCAGTCGCACGGAGCCTGTCATGCAAGCGACGCCCCCCTGGGTCAGGTCGCCCCTCAGGTGCCCGCCGAGCTCGCGCTCGCGGCTGGATGAGGGCGGGAGCGGGCGCCGAGCCGCAAATGAAAGCGGCCAGATGAGGGGCGAGGGCGACTACAACTTCAGGCGGGTGGCGATTCGGCGGAAGTCCAACCACTCCTACCTGCCGTTCGGGACCCCGCGGCCCTGGAGTCGGCCGTCGTCGCACCTGGCTTGGGCCGAGTCGGCCACGTCCAGGGGCCAGGCCTCGGCAGACGCCCCAGGCAGCAGTATCTGTCCAAAGATCACTATAGTTCCACCTTGCTTGAAAAGCAGCACAACCGCACTGATTGATCAGAATGCATCTGATGAAGAGGCTCAGGGAATAAATGGGAAGACGCCAGCAAAACACTTAGCTGCAAGTCCAAAGCCACAAGTGCCTCCAAAGCCACTACACCTGCAGAATTTACCTTCGACCAGTATACACCAAACTCCTAGGCATAAAGCTTTATCTAGTGCAAAACCAAGGATGGAGGAAGTTAAACCTGCCTCTGCTTGTGTCTCAAAGGAAAAACCCAGTAAGATATCAGATCTCATCAGTCACTTTGAAGGAGGCAGCACTTTATCAAATTACAGCGATTTGAAAAAAGATCCTGCTGTGAACCTAAATGCTCCTAGAACCCCAGGAAGGCATGGATTGACAGACACACCTCAGCAGAAACTCCTCTCCCAGCACTCACCACAGAAGCAGGGAAATGGTACAGATCAATCTCAGGGTGAACAGACTTGTGTGGCTAATGGTATGGTAGCAGCACAAAACCAGGCGGAATGTGAGGAGGACAAAGCGGCCACTCTTAGCCCAGATACTTCTATTCAAACTTCTGAACCCTTGCCTGATACAAACTTAGTGAATGGAGAAAAACAAGAAACAACCATAGGCCCTGCATCACCCACAACAAATAACTGTCATGAAGATGCTTCTGACAGTAGCTGCAGGACTTTACGTGCCAGCCCTGTGCTTCCCCTGGAAGAGGAAAGGACAGACACAGAAGCCAAGGTACAAGAGATGGAAGGTGAAGAAAGCCCCCTAGAACTGGAACAGCTGGACCAGCACCATGAGATGAAGGAGACTGATGAAGAAAAACTTCACAAAATAGCCAATGAACTTTTGCTTACAGAAAGAGCTTATGTCAGCCGACTTGCTCTCTTAGATCAGGTATTTTATTGCAAACTATTGGAAGAAGCAAATCGAGGTTCATTTTCAGCAGAGCTGGTGAATAAAATCTTTTCTAATATTTCATCAATAAATACCTTCCATAGTAGATTCCTATTGCCAGAGCTGGAGAAAAGAATGCAAGAATGGGAAACTACCCCTAGAATTGGTGACATCCTTCAGAAATTGGCACCATTCCTTAAGATGTACGGAGAATATGTGAAGGGATTCGATAACGCAATGGAATTGGTTAAAAACATGACGGAGCGTATTCCCCAGTTCAAATCAGTAGTTGAAGAAATTCAGAAACAGAAGGTCTGTGGGAGCTTGACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGCATTCCCCGGTATGAGATGCTCCTTAAGGACTACCTAAGGAAATTGCCCCCAGATTCTCCGGACTGGAATGATGCTAAAAAATCACTTGAAATTATATCTACAGCAGCAAGCCATTCTAATAGTGCAATAAGAAAAATGGAAAACCTAAAGAAACTCTTAGAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAATCCTTCAAATGAATTAATAAAAGATGGACAGATCCTCAAACTAGCTGCTCGGAACACATCAGCACAGGAACGCTACCTTTTCTTATTCAACAACATGTTGTTATACTGTGTGCCAAAATTCAGCTTGGTGGGCTCTAAGTTTACTGTTCGAACCAGGGTAGGCATCGATGGAATGAAAATTATAGAGACTCACAATGAGGAATATCCACACACTTTCCAGATATCTGGGAAAGAGAGAACACTGGAACTGCAAGCCAGTTCTGAGCAAGACAAAGAAGAATGGATCAAGGCACTTCAAGAGACTATTGATGCTTTCCATCAGAGGCATGAAACTTTCAGAAATGCAATTGCTAAGGATAATGAGATTCACTCAGAGGTTTCTACTGCTGAGCTAGGGAAAAGAGCTCCAAAATGGATCCGAGATAATGAAGTTACAATGTGTATGAAATGCAAGGAGTCTTTTAATGCCCTGACAAGAAGAAGGCATCATTGTCGAGCATGTGGACATGTGGTTTGTTGGAAGTGTTCTGATTATAAAGCTCAACTTGAGTATGATGGTGGTAAATTAAGCAAAGTCTGTAAAGACTGTTATCAAATAATAAGTGGATTCACAGACAGTGAAGAAAAGAAAAGGAAAGGAATTTTAGAGATTGAATCAGCGGAAGTATCTGGAAACAGTGTGGTATGCAGCTTTCTTCAGTATACGGAAAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAACAAGACCCTCTCGTGCTGTACATGTATGGTGCCCCCCAGGATGTCAGAGCCCAGGCCACCATTCCACTCCTGGGCTATGTTGTGGACGACATGCCAAGGAGTGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCTGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAACAGAAGTGGCTGAAAATCATCCTTTTAGCTGTCACAGGTGAGACGCCAGAATGTCCTAGCCAGCATCCAGACACTTTGGACGATCATCTTGAACCTAAGAGAAAATCAGAATGCCAAGTTCCAAGACCTACCACGGTGTAGGGTGTGTCTCAAGATTTATAGCTCACGATATTCTCAGCTCTCCTTGTTCATCTCTTAGCACTTTATGTTGAAAAATTTTACAGGCTCATAAATGCATCTTTTGGGGGACTGTTTTTATGTACTCTTAGTGAAATTAATGTGCACAGCCATTCTACCCATAAAGTTTGAAATAATGTGAAAAGTGGAGCATTTTTCTAATGAGCTATTCCTTGAATATGTACTTTTGTCTTGGAAAAAAGTGGTATAAATTAATTCTATCACTTTAGGCTAGAGAAGTCTTCTTTCATTTAAGAAATCCTTTAATGTCTTCACTTACACATGTAGGCTTTATAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAGATCCACAGTAAAAATAAAAAAAGAAAAACAACAATACAGGGACAATTTAGGCTATTGTATTAACTTATTTAAGTTAGTTTATAAAACAAGCTGCATAAATGATGTACATTCTTTTAAAGCAAAAGAAAAAAGACACATTGTTGGTACTCAAGATAATACTTGTGTTTGTAGAAATACTTCTAAGAATAAAATGTCTTAAGTATATAGCAATTATGTACATACAGTATTAAATACAAATATATATATACACACTATACACACTTTTCAGGTTAGGTTCATATTTGTCTCTAATTTATTTTTAAATATACAGCATGTTTTATCTTGGAACTGAGCAGTGTTCTAAACTTATGAGATGTTTTTGCTGATTTACATTTAACTGATTAACATCTAAGGGTATTGATATTTTTATAATAAAAAGCTGTAATTTATGTGGCATGGGATATATTAGTGAGTTCCAACAGTATTTTTAAAGTACTATTTTTCTTTGTTCTGTGCCTATTTAAAACAGTGCCTCTCTTTGAAGGTGCTAATAATACCTAGTTAAATATAAGATGAGGGTTTGATTAATGCTTCAGTCTTGATTACTCTGAGATAAAGTGCATTTTGGTCACTGGGATGATCAAGTCATACAGATTATTTTACCTTTTACCGTTCTCTAATTGTTGTGGCAGTTAACATCAACATGTATAAGATTCCTGACCTTACATAGAACTGGGACATACGGCAACTACACTTATTGTTATGTTTTCCTTTCCCTTAAGACTGTTAGTTTTGGTTAAATGAGGACTATATATAGTTAACACTTAAGATAACTGTGTGGGCTTATTCCTTTGTCAGATACGAAAAAAAAATTCACATGTGATAATCTATGATTAAGGGTAAAGGATAGGTAATTAAGGCAGTTTATGCTTAATTTTTTAAACCACCTCACTAAAGAACAGTGGGGGAAAATACAATATAGAAAAAATAGTATTTTAATGGCAGGTTTTGGGGGGTACAATATGATTGATGAAAATTTGAGCATCCCCCCCCCCTTTTATCCTCTGGGGAATTTTAATAAACAATTTTAATATTAATAGATTCCTGTCACAAAGGCCGTTCTTTATTATATTGTAGTTGTGATTAAAATCTCACATTGTTGGATATTTAAGTTAATCCTTTTCTCAAACTTAGATCTCTCTCTTGTTTTACACTTACTCTATCATGTTCCAAACATTGTCATTTTTTAAATTCATCGGTCTGCTAGAAATCCACAAGAGTGATCCTACTAGCCTTTGGGGATTACACTTTTAAAGGTAGATCAGATTCACTCAGAATTGGAGATTGCCACACATTTTATTCAGGCCCTGTTTTTTAAAGAAATATATGAAGTATCAGTATCTCTTTTTTTCCCCCACATCCCTAAGGAGAAGCTAAACTAATTATAGTGGGCATGATTAGATTGCCTTCTTCTGAAAAAGGAATACCAGCCATTACCATCAACATTAAGCCAAATACTTGGAGCCAAAAAAATATAAAGGTAGCTTCTTAGGCCTATTAAATTAAGGACAAATTTAAAATATTTACATTGTTTCTCTTTTCTAGTTGCCAGGCATGGGTGTATTTGTGTATGTGGTGTTTAGGGGTGATTATTGAGAAGGTTATAATATGGCTGTAGGTGATGCTTTCTTTGATTTTCTTAATCTCAAGAAAAGAGAAGCAGTAAAAATGTAGAATGATTACCAGGAGAAGGTGACTTGTAATGAGGACAGAAAAATGGAAATGTAAGGGCCAGTTAGAAGATTTACAAGTCAAATTATTTTTAAAAACTATTTTGAAGAACAAGATTACATTTTTCCTACAAATAAGTCCTCCTGGAATGGAAGTAACATGAACAGATTCAAATTTTGGCTTAGTAATAATCAAATGTTATTTAATGTAGATTATTGAAAGAAGACTCATGTAAAGAGAATATTTATTATCATACTCTTAACATTATCTTTAATTTTTTTCCCCCAAAAATAGAAATGTTAGCATCAGAAGAGAATTTCTGCTTATCCAATCCCGTCTTCACATTCCACATGTTCTTTTGTCAGGCACAAAGAGAAGCAATGAAGCAGCTTTGTTTTCATTGATGCTTTTACTTGGAGAAAGGCAAAGGAATACTTTTAGCCATTTAGAAACACTCAACCAAAAGACCTCAAAATGCACCTAATTGATTATAAGAGTAATGTCTTCTGCTTTCTGAGACACCTGAGCTGTCATAATAAATTGAGCCTAGAAAAGCAATTGATTGTTTTACTATTAAAACAACATTCCATAAGGGCCTTATTCTTTATTTTCCTCTAAGTCATCTTTTCTTTAACATGCCCTTCCTTCAGTCTTAAAAAAAATACTTCTTTGATAAAAACTACTATTTATTATAAAACATTCCAGTTTTTTAAATATAAGTTTTGCTTTATTGAAAGTCTACCATTTGGTATATTGAATATGACATGTAGTGCAGACTTATCTTCAGGTTTTAAGTGGGACCCAAAAATGAAAAATGCCACCACCCACTTTTGTGACAGTGGCATCTATAATGCCATCATGTATGCAAGCAATAAAATTTTACAGGGTAGGATTTTATACTGAAACTTTAATGTGAACATTCCTAGTCACAATGATATAGAGAATTAACTTCTAGGAGTGATACTGTAATTCGAATTGCTCATTTTAAGGAAAAGAAAGTACATGTGGCAGGGTTTGGAGAAGGGATAACATTATTCTTGAGATTCAAGTAACCATCAAAAGCCTTTTTATTTTTGCAAAGGGTCTGGATGGTTAAAAAAAAACAAACAGTTAAAGCACATCTGCACAACTTTATCAGGTTACATTTCATTTTCCATGAAGCTTAATGTAGATTGGTATATTTACTGGCTAATGTACGCAAATTAAAAAGAAAAAAAAATCCCAATTTTTAAAACTTATCAAAACTTTTATTGTCTTCTTTGTGGAAACAGGATTTGTCCCCCTCTAAATTCTCATTTTTGATTATACCCAAAGCCTTAAGTTCTTATTCTGAACTCATTGTCTGTGATAACTGTAATACTGATCTTTCTGAGCTGAGTATATCCTGAGGAAAAGGTAACAATGGGAACAAATAAACTTCTAGGGAACAAAAGGTTTTTGTTGTTATTTTGTTTTTTGTTTTTGCAGGTATTCTTGCTGTATTGCAGAATAGAAAATTTTGTCTACATTACATAATGTTCCTGTTAGAGCCTCTAAGATTAAAAGCACATGGTATATATAAGCTAAAGTTAACTCAAAAAGCAAAAATATCTTAATGTCTTCATTCTTGAATTTTATATTCTTTAAGAATATATTAATATGAAATCTGTGACTAATGTGTTCTTATTCTTAGGGCTATATTGAACATCTGTGGTGGATCATGTTACTTTTTCATCCTCATCCAATTTTAGTAGAACCAAATTGCTTTTTATTTTAATACTATTATTTACTATAGAGTCTCCAGATTTAGAAAATGGAGTATAATATAGAAAGACTACTAGATATACTTTTGAAACCCTTTCTGTGAGTTTATGCATACAGGTATATATGTAAAAGCACTGTTGATTTCAAATTCTGTTTTTCCATAGGAATAAAATTTTTATAGAAAATATTCTTTTTAACTTAAATATTTTAACATAAATTATATATATGGATTTTTAGTAAAATCTATTCTTATGTATGCCCTGTAATCATGTTGTCATGAGAAGATAACTTTGCTTTCTTTACTGATACGGCAGAGAAGAATATGATTAGGAATTGAAACAAGCAAGTACGGACAGAAAGGTGGACAGAAAGAGACCCATGGTCTCCAAATCAGAGCAATATATCTAAGATAAATGAAAATTATTTAAACTGCAGGGGGGTATAAACTATAAGATGCAAATCTATGTAATTGCACACTCATAGATCTATTGCACCTGGGCCTTTCACCTTGGCCTCTAAATTTATACCACTAGTATCTTGTCATTGGGCTTCCCAGGTGGCTCAGTGGTTAAAAATCCACCTGCTAAGCAGGAGATGTGGATTCAATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCTAGTATTCTTGCCGGGGAAATCCCATGGACAGAGGAGCCTGATGGACTGTAGCCTATGGTGTTGCAAAGAATCAGACACGACTTAGCAACTAAACAGCAACAATCATATTATTACTTTTTCTTTTAGACTTAAAAAAGAATACTGTTGGACCATTTTCTGCACTGTTGAATGACATAAAAAAAAAAAAATCCCTCTAAAGTCAGTCATGGTCTGTCTTCTACTTTTTGGACTGAACATTTGGCAGGAAACAGTGTCTTTTCTGTCTTTTGAAATAAAATAGCACATGGCTTCTACAAGATAGTTAACTCATTGTGAGTCACTGAGAGTTACATGATGTTTACCCCTTCCTAAAATTCATTATAGATTGAATTAGTGAGATTAGGTAGACTAGTGAGAAATTAAATCAAGAAATATTGTAGCATATTTGAATAAGTGAATACCAAATACATAGAGTGAGATATATATACATTAATATATAAGTTTGGGAAAAGACATAATAGTCTATGGGACCATTATGATAACAGAATTGCATTATATATTACATATTATATGGATGTTGGAATGTATCACTTGGGGAAGGTCTCCATCAGCAATCATATCTGTATATAAAATTTGGGGGATTTTGTTTGTTTTACAAACTAGCATTTCATTTTGTGAGTGACAATTGACTGTTATTTTTGAATAAGTGCTATCTGGGTTTTTGAATTGTTGAATGATCAATTTGAAAAGGTATGTTAGCAAAATTTTAGAGTTAACTCAAATGTGAAAAAGTGTACACAAAAAGTAAGTTTTCTTTTCTAGCTGTATGAATGTAAAATACTTGCAGATAGTGTATATATTGTGTAAATATGTATATTTGGTCAGAGAGCTGGAAACATTGTAAAATTAAGCACTTTAATTCTTATTAAATAAATACTTGTATCTTGTAAATAAATACATCCTTGAATGAATTCTAAAGGCTTAGATGTTATTTGAGCTAGGATTATGCATGTTCAGTACACAATGATTTGGTTGTTAGAAATTTTGGTTGATTCAGAAAAAAGTTACGGCATTAAGGTACTGATGTTCCTTCTGACC EMBV3_28519 CATCCATTTCATAGAGACTTACTGCGATATGCCAAGCTGATGGAGTGGCTAAAGAGTACC Gene GeneID:504440|EXOC1:NM_001102484:89_cdna UTR3_Alt 2 NULL GeneID:504440 6 GENE EXOC1 MGC165876 exocyst complex component 1 EMBV3_33602 ATAAATGCTCACTGACTCAGACTCTCTTCCGAATGTAGAACATCTCGCCCTTCGAACCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11730 TTGCCCTGTATGAACACTGTCTGCCCCAAATGATCGTTGAGAAGCCACAGCTGCACAGAG Gene BVV0102_164394 - 1 EMBV3_19487 GK000006.2:107221546-107227708 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10527 CTGATGACAAATGGCATTGCTTCATAGGATGCCAGAATAGTTTTTGGCAGCTAGTTACAG Gene BVV0101_067782 - 1 EMBV3_22880 GK000014.2:64565156-64875134 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11603 CAACTTGATTGGACGCTTGCAGCTCACTACAGAAAGAATGAGAGAGGAAGAGAATGAAGG Gene GeneID:510331|CUL5:XM_002692966:14_cdna Constitutive 0 NULL GeneID:510331 15 GENE CUL5 NULL cullin 5 EMBV3_18857 TAAGTAGTTTTGGAAACGTGATCAGGCACCCCCTGGGTTATGCTCTGGCAAGCCATTTGC Gene GeneID:281120|DNTT:NM_177495:24_cdna Constitutive 0 NULL GeneID:281120 26 GENE DNTT NULL deoxynucleotidyltransferase, terminal EMBV3_22820 AGAGCGGGTGGGGCTTGCTTGTTCATTTCTATCTCCACTTCACGCATCTCTGTTCCTTAG Gene GeneID:615514|GSTM1:NM_001083772:194_cdna Constitutive 1 NULL GeneID:615514 3 GENE GSTM1 MGC142892 glutathione S-transferase mu 1 EMBV3_29789 CACAAAAAGGGCAGTTTCAAGAAAGGCTTTATCAACCGTTGAATCCTAACCCAGCCATGG Gene BVV0102_291503 + 1 EMBV3_00176 GK000008.2:112336419-112418135 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31499 GTGAGGCATGTCCTAGGAGGCAGACTGATACATGAGATCACAGCTGTATTTTCTTTGTGG Gene BVT0102_079646 + 1 EMBV3_25617 GK000024.2:43455154-43500035 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140336 TCONS_00140328 TCONS_00140337 TCONS_00140332 TCONS_00140333 TCONS_00140329 TCONS_00140334 TCONS_00140331 TCONS_00140335 TCONS_00140330 1 XLOC_085106 Coding TCONS_00140334 XLOC_085106 Coding Coding CEP76 24:43498684-43515274 j TSS104772 3828 2 TCONS_00140334_2 362 12 0.769968051118211 1.29213657994424e-30 0.000361668429344009 0.000145369718403689 3.03222775224268e-15 9.81200713940295e-30 9.42739075226203e-24 8.020847687717e-10 0.000239538833551831 0.00060813731980839 0.000135770365719826 6.26655535886414e-05 0.000141635142401469 7.30684179860864e-05 1.07421882936153e-10 8.29609881420143e-26 0.00135337015500527 0.000526149150134851 5.04644676402368e-05 6.13975386905171e-07 2.68633080640904e-08 9.47685978111437e-05 0.000354134875471566 0.000634832012948367 2.26461539452364e-18 3.54487096122046e-23 0.000941294287244281 2.52377519880208e-07 1.16070385970815e-28 2.68723174648368e-14 3.65338363756656e-05 XM_005224166.1 CEP76 PREDICTED: Bos taurus centrosomal protein 76kDa (CEP76), transcript 0.0 5380 98.38 0.792842215256008 NM_024899.3 CEP76 Homo sapiens centrosomal protein 76kDa (CEP76), transcript variant 0.0 3101 85.64 0.685736677115988 TCONS_00140334_2 sp|Q8TAP6|CEP76_HUMAN CEP76_HUMAN Centrosomal protein of 76 kDa; 0.0 715 96.12 0.994475138121547 1 coding 0 0 0 0 0.829780894033229 0.0821547500767182 -0.183910521275722 0.026013433722339 CGCGCGAGGCCAGCGGTCGCGGGCTCTGGCTCCGCCACGGAGACGCTGCGGCCGCCGGCGCGACCGAGGGGGAGCCCAGCATGTCGCTGCCGCCGGAAAAGGCGTCCGAGCTGAAGCAGCTTATCCACCAGCAGCTGAGCAAGATGGATGTCCATGGCAGGATAAGAGAAATCCTTGCTGAGACGATTCGGGAAGAATTGGCACCTGATCAACAACAGCTATCAACCGAAGATTTGATCAAAGCCCTTAAACGCCGGGGAATCATTGATGATGTGATGAAAGAACTTAATTTTGTTACTGATAATGTTGATCAAGAACTCCCTTCCTCTCCAAAACAACCTGTTTGTTTTACTGACAGACAATCAACGTTATTAAAAAAAACTAATATTGATCCAACACGGAGGTATCTTTACCTTCAGGTTTTGGGTGGAAAAGCTTTCTTGGAACATCTGCAAGAACCTGAGCCTTTACCTGGACAAGCTTGTTCAACCTTTACTTTATGTTTACATTTTCGAAACCAACGTTTTCGTTCTAAACCTGTTCCGTGTGCCTGTGAACCAGATTTTCATGACGGCTTTTTACTTGAAGTACACAGAGAAAATTTAGGTGATGGAACTAGAATGGCTGACTCTACCACAATGTTATCAATAAGTGACCCAGTTCATATGGTGCTAATCAAGACAGACATATTTGCTGAGACCACTTTAGTTGCATCCTATTTTCTTGAATGGCGATCAGTGTTGGGTTCAGAAAATGGAGTGACCAATCTTACTGTGGAACTTATGGGTGTAGGCACAGAATCAAAAGTTTCTGTGGGAATTTTAAATATAAAACTTGAGATGTACCCACCGCTCAATCAAACATTATCTCAAGAAGTAGTGAACACACAGCTTGCTTTGGAACGTCAGAAAACTGCAGAGAAAGAGCGATTATTTCTTGTGTATGCTAAGCAGTGGTGGAGAGAATACTTGCAAATTCGACCCTCACACAATTCACGACTGGTGAAGATTTTTGCACAGGATGAAAATGGGATTAACCGACCAGTCTGTTCTTATGTCAAACCACTTCGAGCTGGAAGGCTTTTGGACACTCCAAGGCAAGCAGCAAGATTTGTCAATGTCCTTGGTTATGAACGAGCCCCTGTTATCGGAGGAGGAGGGAGACTGTGAAGACCATGCCAACCTTCTGTGCAGCCTCCTGCTTGGGTACGGGCTGGAAGCTTTTGTCTGTGTCGGGACCAAGGCCAAGGGCGTGCCCCATGCATGGGTCATGACGTGTGGCACTGATGGGACCGTCACTTTTTGGGACAGTTTAACAGGACACAGGTACCTCCACAAACCTATCAACCCTGATGAGCCTCCGGCTGCCGAACAGCCCAAACCATTGTACCCGTATCGAACAATTGGTTGTGTTTTCAATCATCAGACGTTCCTGGGAAACTGTCAGCCCTCTGACTCAGTGGAAACCTGTGTGTTTGATCTGAATGATGAGTCCAAGTGGAAACCCATGAATGAAGAAGCGGTTAAATCCGTGTGTGCTCCAGGGGCCACCACGTCCCTTCCTCCCTTCCCTCCGCTGTGTGCGTCCACGATCGACGCTTCTGTGACAAGCAACGAGATAGAAATGCAGCTCAGGCTGCTCGTGTCGGAACACAGGAAGGACCTTGGCCTCACTACTGTCTGGGAAGACCAGCTTTCTTATCTCTTGTCACCAGCTCTGGCATCTTATGAATTTGAGCGTACGACAAGCATTTCTGCGGGCAATGAAGAGTTTCAGGATGCTATCAGAAGGGCTGTGCCTGATGGCCACACATTTAAAGGGTTCCCAATACACTTTGTGTATAGAAATGCGAGGCGCGCGTTTGCCACGTGTCTTCGGTCTCCTTTCTGTGAAGAAATCATCTGTTGCCGTGGAGACCAGGTGCGCCTGGCAGTTCGCGTCCGCGTGTTTACTTACCCTGAATCTGCTTGTGCTGTTTGGATCATGTTTGCTTGTAAATATCGCTCAGTACTATAGGACTAAGTTTCTATAAGACTATACCTGTGTTTTATTAGAGTTTTACACATTGTATTGATAATAATACTAGGTATTTCGAGGTTGATTACTTTAAAAATCACAATCTGGCTTCGATGTCATATTTAACTTTTGTATAAGCCTCACTAATAATGTTTGAAAAGTATCATGATGTGTGTATAAAAATTAAGGATGAAAAACTTGTATGAATCTGAGAGGATGTTAGTATAAATTAAGTGTTTATCTTATTTTAATAAATACTACTTTGCTTATAAGTAGTCAGTAGTTTAAATATGAAAATAAAATTTACTTAGTTTTCTTTGCATTAACAGGTAATCGGAAAGTTATTTGCCTAAGGATTTGAGCCATAGTGAAGTTAATACTATCATTATTTTTCATAGAGTAATGGGATTATTTTATATAAATTAGGAGAAATTAACTTCACAACATTTATTTATTACATAGGTGAAATACATTTTGATGAATTTACCACTTTTGTGGTTTACTCATAACTACAGGGATATTTGTGACTCTCTAGAGAGTTATGGGAAGACATGGATGCAGGAGCAGAGAATAAACTCATATCAGAAAAGCATAAATATTAATAACAAACCACACATGAAAGTATACAAATAATTTATAAATATTTGTTAGTGTGATTCATTGTAAAAGCAAATTGTGTATTTTATTTTTTTTGGCTTATTTATTTTTGAATTGAGTATTTTAGAAAAAATTTATTATACCCTTTTGTTGTATGTTGAAAATTGTTTTCTGTAATTGATATTGGCAGTCTGTTGCTGATTTTCTGTGGTCACAGCATTCTTTACTAGCCTCTCATGGAGTCTATCTTTTTAAATCACAGTTTTTGTTTGTTTCTTTTCTCTTTATGATAAAAGCATCCATGTGTATGTGGCGAATGTAAATCAGAGAATCATTATGTAAGGCCACTGAAAAATGAGCATCTGTGAGTGCCTCCATGCTGATGTTTGTTTTTAAGTTGAGAACAGTGTACTTTGAAGAGGCTGTAGTGATTTAAACTTTGTGAGAAGCTGCCTGATGGGATTGCCTTGCCATCTACCCACCTCTCTGTACAGCTCTCATTCATTCCTGCACCCACTGAGCTTCTTATGAAAGTGACTATACCAAGTGGCTGTGCAAGTTATGCTTTTCATCGCTAATTCAACATGGCAAATAAAATAATATTTTAGAAATTAAAATCTAAAGATACTCTAAAATTTACTTTTTAATTTTTACATACATAATTATTTATAACTTGTTTTAAAAGTCTGAAAATATCTCTCATATCAATTTTTATTGAAAATGACCAGAAATCAGAAGTTTCTTGAGACTGACATGACTTTAGAGAATCAGCAAGATAAGAATTAAGACTTTTTGGTCTGTTACCAGAGTTATTTGCAAAGCTATCAACAGGGAAAATTGCTTGTAATTTTCAACCTTTGGAACAAACTATTTGTGAGGCATGTCCTAGGAGGCAGACTGATACATGAGATCACAGCTGTGTTTTCTTTGTGGCTGAGCTTCCTGCATTACTGTGCCAGAGTAACACGTGTACTTGTAATGTGCTTTTGGTGTAAATTCTAAAATAAATTTCCTTTTTATGCACTTTAATAGAGCCTGGCATGAATTAGTATTTTCCTTTACAGATGGTATATTTCCAAATATTTTAGTCTTTTTGTCACTAGAATTCTACTACTCTTACTAATAATTTTTCTTTTTAAAAATTAAATTTACATTGTATATTTAGCTCTGTCATAAGTTGTTTTTCTATTAAAATTGTAAACTTTTAAAAAATAT EMBV3_09125 AATCCTGGTAAGGACAAGCGTGTTGAGCCATTTGGTCCATTAGGATCCCGTGACCCAGGT Gene GeneID:781788|ALKBH8:NM_001080341:29_cdna Constitutive 1 NULL GeneID:781788 15 GENE ALKBH8 MGC152202 alkB, alkylation repair homolog 8 (E. coli) EMBV3_42032 TGACACTGCAGATTCGCCCAGAGGTAGAGGAAAGGGGAGGTGAGGGGTCAGTAAGAGTTT Gene GeneID:538050|RAB7B:NM_001078013:88_cdna Constitutive 0 NULL GeneID:538050 16 GENE RAB7B NULL RAB7B, member RAS oncogene family EMBV3_11894 AAGACGGTAAGAAACCTAGGACTAAAGCACCCAAGATTCAGCGGCTCGTGACTCCATGAG Gene GeneID:783462|LOC783462:XR_084177:65_cdna Constitutive 0 NULL GeneID:783462 14 PSEUDO LOC783462 NULL similar to ribosomal protein S6-like EMBV3_12881 TTCAGAAGTCGTCCATCAAACGTGCCTGATGCTGTGTTGATACGTGAAGTGTCCTGGAGC Gene GeneID:618228|LOC618228:XR_084686:825_cdna Constitutive 0 NULL GeneID:618228 4 PSEUDO LOC618228 NULL similar to nucleolar protein with MIF4G domain 1 EMBV3_29620 GATACCATCTTCATCTAAACACAAAACAGGGGCTTCCTGGTGGTCCAGTGGCTAATACTG Gene BVT0102_368597 + 0 NULL GK000015.2:1-85296676 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060447 TCONS_00060450 TCONS_00060448 TCONS_00060446 TCONS_00060449 TCONS_00060451 1 XLOC_036736 Coding TCONS_00060451 XLOC_036736 Coding Coding - 15:85292392-85296031 - TSS45205 3146 1 TCONS_00060451_5 115 0.558486967577877 2 0.135788894997251 5.98421502393824e-06 1.38062716317557e-10 3.24306921912203e-16 1.1061449732426e-10 3.54147399190483e-11 0 4.72697009338279e-07 5.63949162010455e-06 4.26974019831651e-11 7.4096287128613e-08 2.52253578698084e-10 0.00038314423395627 1.81622095193913e-05 7.31714697652247e-12 1.24850811944438e-05 7.77836008439061e-05 9.67824769665534e-05 0.000979162380489733 0 2.00571820523726e-10 2.94389070796219e-10 5.87369425874716e-08 3.25873305137676e-14 0.000182692223006907 2.70743128725766e-13 3.00874709962005e-10 1.1073094647465e-09 2.65824079459897e-08 0.000141134726611173 1.79494555995823e-07 XR_227422.1 LOC101908301 PREDICTED: Bos taurus uncharacterized LOC101908301 (LOC101908301), 0.0 1382 94.90 0.276541640178004 XR_245382.1 CCDC122 PREDICTED: Homo sapiens coiled-coil domain containing 122 (CCDC122), transcript variant X3, misc_RNA. 2e-47 196 74.52 0.0991735537190083 TCONS_00060451_5 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 9e-41 147 61.26 0.956521739130435 0 coding 1 1 1 1 -1.19974519443174 0.0265222116942849 -0.0164131270169391 0.798532970563696 GTTCTTCTTTCTCAGAGTCTTTTTGGCCATTTAAGGTCATCCAGAGGACCCAAGACATGGTGGTTACTAGTAAACTTCCCACAGTAGTTCTTCATTCCATGTGGACTCCTTCAAGGGCAGTGAGCATCACAGCTTCCCTTGAACTTCGTCTGGGTAAGTCTTGGCCTGTATAAGAAAGTTTCATGCCTATCTACTCTGAACTTCTTTTGTGGTATTGACATGGTTGTTTTGAAACATAATTTACTTTCCAGTAATTTCAAATGTATGGAGAACTCCTAGCAATGGGAAAAATTACTCACATTTGCCACATCATCTAAAGTAGTTTATGTATTTTATCCAAAAGGGGTGCCTTCTCCTGCAGAATCAGCACATAACCTCCAATATCAGGAAATCATATGGTTTCTACATTATAATGTAATCCATAGCCCCACTTCCACTTTTAGCAGTTGTTCAAGTGTATGACTATATCTTCTTTTGCATCCTCATCCTTTTTTCTTTGTTTAGAGTGTTACTGAGATTTTCAGTTATTTGGACAAACTTGATGGATTTAAAGCAGACATGGTGAATATGGGATCTGGGTGGCCTTTTCTATATGGATTTCTTTTTTTTTTTTTGCCACTAAAGATGGTTTTCATGTTTATTCATGTTGTAACATGTATGAATCCTGCATTCTTTTTTCCCCCATAGTAATTAAAACCAAATAATATGCCATTTACCATTTAGATGTTTGTAAGCATACAATATTATAGTAAACAACCTTTACTTGTTTTGCAAACCAGTTTAATGTGTACCTTGTGCGTGCTTTGGAGAAACTCAGGAAACTGAGTCAGTGACTGAAGTGGCCCAAGATATCACCTTAGATACCATCTTCATCTAAACACAAAACAGGGGCTTCCTGGTGGTCCAGTGGCTAATACTGGACACTCCCAAAGAAGGAGGCCCAGGTTCATTCCCTGATCCGAGAACTAGATGTCCCATGCCACAACGAAGAGTTTGCATGCTGTAGCTAAATATCTGGCTTGCCTCAACGAAGGTCCACCTGGAGCAGCCAAATAAAAAAACAAATAAACGTTAAACAATAAAACCAAAGGAAAGGAAGGATATGGTTGTTGTAGAAATTTATGTCTTAGCTTTCCCTATTGATTAAAAAAAAAAAGTTTCACAAGACTGTCTGTTATCCTTCTATCTGGTATATACAGAGGATTCCTTTGAAATGAGATTTCTCTGGTAAATGTGACTCACAGAAGAGCCGTCTTGAACTTGGATTTCAAAGATGATCATGTGTCCTCTTAAAAGTTAATTAGGTCCAACTAATTCTCATGCTGAAGTGGTATATTTTGGGGTAGCATTTGCTCCCCTTCACTTTGGATGTATCCCAATTTGTTTACACAGTCATCTACTGAAGACATCCTGATATTTGAAAGTTTTTAGTTATTACAAGTAGAGCTGTTGTGTGTAATTGTGATACTTTTTGTCTGGACACTTTTCCAAAGCTGTTTACTAAGTGCTAGACGTGTAGTATTCAGTCACAGGTGAGCCTTGTTTAACTGTGGAAAAATCCAGCTATGTTTCTCTGTGGCACGTGGGATCTTCCTGGGTAAGAGATCGAACTAGAGTGCCTTGCATCGTCAGGCAGGTTCTTTACCACTGAGCCACCAGAGAAGCCCTGCCCCCCCCCCTTTTGAGTTTACTGGATCTAATAGGTGTGCAGTGTTACTTCAGTGTTGTTTTAGTTTGTAATTTCCTAATGATATGTGAATTTGAGTATTTTTGATATGCTTATCTACTACCTTTATATTTTCATAGGCCTGGTGTTTAGATTTATACATTTTTAATGAGGTTGTTTGTTTGAGATTTTTTGGTATAGTTGGAGTACAATCCTTTACCAGATATGTATTTTGTAAATATATTTTTTTCTGTGGCTTGTGTTTAAGTTTTGTGAATAAGGTTTTTCACAGTTTAAATTTCTTATTTTTTAAAGTTCATGTTATATATATTTTATATCCTTTTTGGATAGACTTTAGTTTTTTTTTTTTTGTTAAATTTGATAAACAAAACTGAGGTACTGTAGACACAGTTTTAATCAAAGCTGAGGTACCATAGATACAGTTTTGCCTTTTGTCTATTGAGAAGTTTGAATGAGGTTGGTGTAAACTGTAAAATTATGTCTACATTCATTTGATTGGATATGGCTTCCAGTTATTTGTATAATTGGTTTTGGCGATATCATGGGAAGTCAGTTTCCCCAAGGGAAACTGGGGTCCGTGAAACATGAACTCTCTTCGATCCCTGGGAATCACTTTCTGCTTTTTCTGGCTTTGGATTTGACTTGTTTGGATATCTCATACTAGTGGAATCACAGAATGTTTGTCCTTTTTTGGTCTGGTTTATTTCACTTACTATAATGACCGCAAGGTTCATCCACATTGTAGTGTTGTCAGAATTACCGACTTTGAAGGGCTGAATCATATTCCATTGCGTGTCTACCACAGTTTGTTTATGGAGTGGGCTGCTATGGACACTTAGATTGCTTCTGTTTGTTGGCCAGTGTGAATCATGCTGTTGTGACTATGACTGCAGAAGCATGCATTTTTTCAGCCCCTTTTCCCATACCTTTTGGGTACACAGCATGAATTAGAGTCAAACTATGAATTTATAGCATGTGTTAGTTTTGGAGTAATTTCTGTGATGTCTTGCACAGTGGCAGCACCATTTAATTTTTTTTGTATGGTAGAATACTGTTCAAGCTTTTGAATATACCCTGTGTTGCATATTCAATCACTCACCTATGGACACTTGAATGGGTTCTACNGCCAATAAAATGGACAAAGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTCGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATGGAAACTGTAATCAAAAATCTTCTAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCAAAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTATGAGGCCGCCATCACCCTAATACCAAAACCTGACAAAGATGCCACAAAAAAAGAAAACTACA TCONS_00062704 r 5' 18880 TCONS_00062704 r 5' 18880 EMBV3_02563 AATGACTTGGTTAAAACCTGATGATCTTACCAGCATTCTGCAGGTTGATGAATACTAATG Variant GeneID:100174924|LOC100174924:XM_002690200:57_cdna 172^256 2 EMBV3_17545 GeneID:100174924 9 GENE LOC100174924 NULL hypothetical LOC100174924 EMBV3_35344 GGGCAGAGGAGTCTTGGTCAGTTTGAGGAGGCTGTGAGGATATGTCTGCCAATTTCAGAG Gene BVT0102_107941 - 1 EMBV3_15167 GK000030.2:96899283-96917373 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30502 TGGTGATGAAGAAAGGAGATGTGGAAGGCAGTCAGTCTCAGGATGAAGGAGAAGGGAGTG Gene GeneID:281729|SMC3:NM_174295:9_cdna Constitutive 1 NULL GeneID:281729 26 GENE SMC3 CSPG6 structural maintenance of chromosomes 3 EMBV3_28735 CACCTGCCTCCATTCTGGCCAACCCTCTTCTAACATGGAGCTCTTACCATCAATCCAGAA Gene GeneID:505937|VSIG1:NM_001045930:16_cdna Constitutive 3 NULL GeneID:505937 X GENE VSIG1 MGC137313 V-set and immunoglobulin domain containing 1 EMBV3_23769 TCCCCGACTCTGTCTCTCTGCAACATGTCAAAGCTCCTCTTTCACCGCTCATGCTCATTC Gene BVT0102_041048 + 0 NULL GK000025.2:26640310-26646274 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146663 TCONS_00146658 TCONS_00146657 TCONS_00146666 TCONS_00146660 TCONS_00146662 TCONS_00146656 TCONS_00146654 TCONS_00146659 TCONS_00146661 TCONS_00146655 TCONS_00146665 TCONS_00146664 TCONS_00146667 1 XLOC_089166 Coding TCONS_00146667 XLOC_089166 NonCoding Coding LOC100847109 25:26642152-26645638 = TSS109592 677 2 TCONS_00146667_3 65 5 0.807173601147776 0.00024530393586447 5.89313189738213e-38 0.000594725660484525 0.000865377277958111 0.00111464677157102 0.000284819048066152 1.94616954414634e-05 0.000140842988356427 0.000553764745360036 0 4.88715662339475e-104 0 3.88681413616486e-05 1.3791458067105e-182 0.000142992108224818 0.00336023875690961 0.00940663034303865 0.000222581792609462 0.00209852408702669 0.00333890407617877 0.003298891859067 0 0 0.000140981043740858 0.00206939703430987 0.000515612626510835 0.00119904474375589 2.1389619165024e-19 7.69786532724755e-06 4.41863803113259e-05 XR_229830.1 LOC100847109 PREDICTED: Bos taurus putative uncharacterized protein LOC440356-like (LOC100847109), transcript variant X8, misc_RNA. 0.0 1222 100.00 0.998522895125554 XR_168882.1 D830044I16Rik PREDICTED: Mus musculus RIKEN cDNA D830044I16 gene (D830044I16Rik), 3e-49 199 75.36 0.406203840472674 TCONS_00146667_1 sp|Q0VD67|YP032_HUMAN YP032_HUMAN Putative uncharacterized protein LOC440356; 2e-08 48.1 74.07 0.412698412698413 0 noncoding 1 0 0 0 -2.80390162474795 0.00159216461682537 NA NA ATAGCAACGGCGCCTTCCCGGGTTCCCCTCTTTCCAGCCTTCCTCCCCAACTCCCAAATCCCCCGTCCCCACGGCCCGTAAAAGGGCTCGTTAGACCTCTCCGTCTCCTCTCCTGCTGAGTAGCCCAAGATTTCGACACGTCTGCCAGAAGGTTTCTCGCTCTGAGGAATTCCTGACACAGATCAGCACGGAACTCACTGACGAGGCCTTGTTTGTTGCTGCCTACCACATGAATCCTGTGCCCATCAAGGAAAAACAGACACAAGACCGAGGGACTCAGATATCCAAACACGTGTTCTTCACCAAGACCCGAGGCACTGATACCCGCTCCGACAGAAACCGTACCCGCACGAAGGTACATCTCCTGCCATCCCCTCATGAGAAGGGACCTCTCCCTACCAACTTGACGTCTGGAGGATGATCCCAATTTTGGTGCTGCTCTTGGCCTCTCGTGCCCTCCCCCGACTCTGTCTCTCTGCAACATGTCAAAGCTCCTCTTTCACCGCTCATGCTCATTCAACAGATCGGTTCTGGGGGCGTTCCTGGTTGTGAGCAACATCACCCCTGAAGCCTCCAAAGTGTTCCGAAACCATCACACACCTTGCCACCCTCAACTGGCAAGGACACCACCAGCAATGAAAAGCTTTAATAAAGAGACAGAGATCCTCCCCTCCTCT EMBV3_15985 GTGTCAACAATGGTGAAGGGCATGTATGGCATTGAGAATGAAGTCTTCCTGAGCCTTCCG Gene GeneID:281275|LDHB:NM_174100:4_cdna Constitutive 0 NULL GeneID:281275 5 GENE LDHB NULL lactate dehydrogenase B EMBV3_36864 CTACGGTGGTTTTGAATCCAAGGCAGTAACAGTGTGATAATCCCAAGGGAAACACTGCCT Gene BVV0102_121605 + 0 NULL GK000026.2:17021635-17048734 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03950 AGCTGGCACATGGGCTCTCCCAAAGCTTCAGCAAAAACACCCAAACATTCGGGCAGCTTT Gene GeneID:515773|CYB5R3:NM_001103250:171_cdna Constitutive 0 NULL GeneID:515773 5 GENE CYB5R3 MGC166196 cytochrome b5 reductase 3 EMBV3_00413 CCAGCCTCATTTAGTGAACATACAATTCAGCAACTTGAATTGGTGGAACCAAGTGGCTGG Variant GeneID:783986|ANAPC10:NM_001080357:31_cdna 675^795 1 EMBV3_22059 GeneID:783986 17 GENE ANAPC10 MGC133969 anaphase promoting complex subunit 10 EMBV3_18862 AGTCACCATAAACGGCTTGCTGCCTGGTTGGCAGTATATAGCATGTGTCTGTCCAAAGGG Gene GeneID:511618|LRIT3:XM_002688104:185_cdna Constitutive 0 NULL GeneID:511618 6 GENE LRIT3 NULL leucine-rich repeat, immunoglobulin-like and transmembrane domains 3 EMBV3_40232 CCCTCCCACCCGCCCTCCCACACCTCCCTGGCTTCTCAGAGGGGGAAGGTCACCCTCTTT Variant GeneID:514263|TMEM39B:NM_001075658:109_cdna 409^492 2 EMBV3_39293 GeneID:514263 2 GENE TMEM39B MGC139045 transmembrane protein 39B EMBV3_27744 AGAAGAACAAGCGGGAACGGGATGAAGATAGCTTGCACCACACTGACCTGTTTGATAGCC Gene GeneID:510316|DCAF8:NM_001101923:257_cdna Constitutive 0 NULL GeneID:510316 3 GENE DCAF8 H326 MGC157366 WDR42A DDB1 and CUL4 associated factor 8 EMBV3_25946 AATTGTCAAGAGCCTAGTGTGCTGTCCAAGATCTAGCAGTTCCCTTACTACTGGGCAGGG Gene GeneID:536822|TMEM64:XM_002692847:238_cdna Constitutive 0 NULL GeneID:536822 14 GENE TMEM64 NULL transmembrane protein 64 EMBV3_03465 GGCCATCAGCAAGAAGTTTGGAGACATGAGGAATTCTCCTACTTTCAAATCATTTGAGGA Variant GeneID:534629|TPD52L1:NM_001076033:15_cdna 730^783 2 EMBV3_36182 GeneID:534629 9 GENE TPD52L1 NULL tumor protein D52-like 1 EMBV3_11582 TATTAAAAGTGGGTAAAGGGACCCTAGCAGGCCTGCAAAGCTCCTCACACTGTCATGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36376 GGAAGTCAGAAGACATATGCTCCGTCATTCATCTGGGTAGAAATGTGGCCCATGCAGGAG Gene GeneID:532277|RXFP1:XM_002694415:17_cdna Constitutive 3 NULL GeneID:532277 17 GENE RXFP1 RXFP2 relaxin/insulin-like family peptide receptor 1 EMBV3_32374 TCTACACTGTTGTAACCCCGACTCTTAACCCGCTCATCTACACTCTAAGGAACAAGGAGG Gene GeneID:782262|LOC782262:XM_002697424:144_cdna Constitutive 0 NULL GeneID:782262 23 GENE LOC782262 NULL similar to olfactory receptor Olfr132 EMBV3_35142 TCCATCGAGTGGTAAGGAATGGCTGGGTACAAGGAGGAGATATAGTTGCTGGGAAAGGAG Gene GeneID:614498|PPIL6:NM_001046537:68_cdna Constitutive 0 NULL GeneID:614498 9 GENE PPIL6 MGC140117 peptidylprolyl isomerase (cyclophilin)-like 6 EMBV3_29300 CCAGCACCTTCTCTCCTGAGATCCTCTCTGACCCTAAACACCTCACGTGCAGATTGGAAA Gene GeneID:507615|CYP4F2:NM_001075322:41_cdna Constitutive 0 NULL GeneID:507615 7 GENE CYP4F2 NULL cytochrome P450, family 4, subfamily F, polypeptide 2 EMBV3_08121 CAGAAGAAATGGCTAAAGCTGAAGGAGGGGGGAGGTGGAAAGTCAAGGATTCTCGGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07452 CCATGCCAAACGTGTAACAATTATACCAAAAGACATCCAGCTAGCACGCCGCATACGTGG Gene GeneID:100297725|LOC100297725:XM_002688923:97_cdna Constitutive 0 NULL GeneID:100297725 7 GENE LOC100297725 NULL similar to histone H3.3B EMBV3_15781 GGACCTGATGCCGAGGACCCTGGATGGCCAGATCACCATGGAGAAGACGCCCAGCTACTT Gene GeneID:617069|HS3ST3B1:XM_002695814:164_cdna Constitutive 0 NULL GeneID:617069 19 GENE HS3ST3B1 NULL heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 EMBV3_28794 AGCAGTCCACAGCTTGATATGCAGGTTCTCCATGACCTCCGACAACGTTTCCCTGAGATT Gene GeneID:788288|MAP3K7IP3:NM_001080371:14_cdna Constitutive 0 NULL GeneID:788288 X GENE MAP3K7IP3 MGC45404 mitogen-activated protein kinase kinase kinase 7 interacting protein 3 EMBV3_17665 GAGCTGGTGGCTGTCTCAGAGAGAAAAGACATCTGTAATGCAATGGGGTCTAAACTGACC Gene GeneID:518801|LOC518801:XM_002698469:503_cdna Constitutive 0 NULL GeneID:518801 26 GENE LOC518801 NULL similar to CG17687 CG17687-PA EMBV3_37107 AGGGCTCCTGTGTCCTGCTTTGGGGACAAAACCACTTAGGAAGGAAAGAGCCCACATCCT Gene GeneID:510830|TPCN1:XM_002694517:430_cdna Constitutive 0 NULL GeneID:510830 17 GENE TPCN1 NULL two pore segment channel 1 EMBV3_00535 AGGTTCACAACCTCAGTGGTTCGTCGGAGCCACTATGAGGAGGGTCCAGGGAAGAAAATA Gene GeneID:100336216|LOC100336216:XM_002688253:162_cdna Constitutive 0 NULL GeneID:100336216 6 GENE LOC100336216 NULL cytochrome c oxidase, subunit VIIc-like EMBV3_15609 TGCCAGTCGATTCTAAGTTCTACAAGATGATCAAGGAAGGTTTCCGAATGCTCAGCCCCG Gene GeneID:280832|KIT:NM_001166484:77_cdna UTR3_Alt 2 NULL GeneID:280832 6 GENE KIT c-kit v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog EMBV3_29397 ATGGTGCAGGTGCTGACACAAATTACAGCTCCAAGTCGATGAGGCAAGACGGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_28390 CTGAGTGAGGCCATTTCCAAAGAGGAAGCCATTTGTGAAGGGGACAGCCAGACCTCCTCT Gene GeneID:514215|CCHCR1:NM_001024536:114_cdna Constitutive 0 NULL GeneID:514215 23 GENE CCHCR1 C6orf18 coiled-coil alpha-helical rod protein 1 EMBV3_39647 GGCCCCTCCAACAACCCCGTCAGTAACGGCAAAGAAACCCGGAGGAGCAGCAAGAGATAG Gene GeneID:533842|OBFC2B:NM_001101151:1_cdna Constitutive 1 NULL GeneID:533842 5 GENE OBFC2B NULL oligonucleotide/oligosaccharide-binding fold containing 2B EMBV3_08155 CCTAGACGCATACGTGTTTCTGAGAGTGAAAGAGCGGCAAGAAAACATCCTGGTGGAACC Gene GeneID:616799|GINS4:NM_001082460:106_cdna UTR3_Alt 2 NULL GeneID:616799 27 GENE GINS4 MGC148462 GINS complex subunit 4 (Sld5 homolog) EMBV3_42539 AAATCCGGGTTCACCAGCTGCCTTCACCATGCCGCCAACGTTTGACCTCAACGAGATTAA Gene GeneID:615933|LOC615933:XR_083841:555_cdna Constitutive 0 NULL GeneID:615933 13 PSEUDO LOC615933 NULL similar to 60S ribosomal protein L12 EMBV3_20269 CATCTTCTTGGCCATCGTCCTGTTCCCCTTTGGGTTCATCTGCTGTTTCGCCTTGAGGAA Gene GeneID:615390|BRI3:NM_001040583:296_cdna Constitutive 0 NULL GeneID:615390 25 GENE BRI3 MGC134621 brain protein I3 EMBV3_18331 AAGTGTCTAGCTTTCAGCAAACGGTGTTTGCCCATTCTAAGCAAGGAGCACATATATAGA Gene BVT0102_299518 + 0 NULL GK000007.2:85782897-85845447 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214450 TCONS_00214452 TCONS_00214448 TCONS_00214451 TCONS_00214453 1 XLOC_130685 Coding TCONS_00214451 XLOC_130685 Coding Coding VCAN 7:85731945-85784703 j TSS160398 8074 1 TCONS_00214451_8 2044 9 0.847129290899786 0.00209523287502186 0.00153878183033386 0.00231121897168361 0.000743687294602153 0.0018374032908027 0.000928273945716229 0.00103281763441998 0.00109565788139244 0.00166645680398636 0.000123852085017877 2.16839328350616e-05 5.39361520123283e-05 0.000324183626803361 0.0011126321602938 0.000330381840339787 0.00156096751579015 6.80493600352494e-10 1.70048272254575e-05 0.0015909568992829 0.0020326658505276 0.000924510268368389 1.06719688204984e-16 1.46237418687753e-09 0.00138987251536818 0.00279427739108166 0.0021605462464817 0.00185030161735534 0.000155650777530729 0.000409384609904241 0.000309403696895409 XM_005192373.1 LOC101909176 PREDICTED: Bos taurus versican core protein-like (LOC101909176), 0.0 1.356e+04 100.00 0.931013128560813 NM_004385.4 VCAN Homo sapiens versican (VCAN), transcript variant 1, mRNA. 0.0 7979 81.78 0.991330195689869 TCONS_00214451_8 sp|P81282|CSPG2_BOVIN CSPG2_BOVIN Versican core protein; 0.0 4079 99.76 0.999510763209393 3 coding 0 0 0 0 -0.0362983122685831 0.780016106317118 -0.0178967690201216 0.826382948217846 ATTGGATTTATCTTTCCCGTTGTTAATATCAAACAGCAAATGCGAAGACTGAGAACCATGTGTAGAAGGGTCGAATGAGTGATTTCAGTGTAAGTGGTCATCCAATAGATTCAGAATCTAAAGAAGATGAGCCTTGTAGTGAAGAAACAGATCCAGAGCACGATCTAATTGCTGAAATTTTACCTGAGTTACTTGGTATGTTGCACAGTGAAGAGGATGAAGAAGATGAGGAGTGTGCCAATGCCACTGATGTCACGACCACCCCATCCGTGCAGTACATAAATGGGAAGCATGTAGTTACCACTGTTCCCAAGGACCCAGAAGCAGCAGAAGCTAGGCGTGGCCAGTTCGAAAGTGTTGCACCTTCTCAAAATTTTTCAGACAGCAGTGAAAGTGATAGCCATCAGTTTATAATCACCCATGCTGGACTGCCCACTGCCATGCAACCTAATGAATCTAAAGAAACAACGGAGTCCCTTGAAATTACGTGGAGACCCGAGATTTACCCTGAAACAGCAGAGCCTTTCTCAAGTGGCGAGCCTGATATTTTCCCCACAGCCTCAATCCATGAGGGAGAAGCCACTGAGGGGCCAGACTCAATCACAGAGAAAAATCCTGAACTTGATCATCTGGTGCATGAACATGCTGAATCGGTACCTCTGTTTCCTGAAGAGTCTTCAGGAGATGCTGCCATTGACCAGGAATCTCAAAAAATCATCTTTTCAGGGGCTACCGAAGGAACGTTTGGTGAAGAGGCAGAAAAAAGTTCTACCACACATACTCCAAGTATGGTTGCAAGTTCTGTATCAGCACCTGTCTCAGAGGATGCATCATTTATCTTAACAGGCACTCCACAGTCTGATGAGCCGTTGTCCACAGTAGAAAGCTGGGTGGAAATAACCCCTAGACACACTGTCGAGTTCTCGGGAAGTCCTTCAATTCCAATTCCGGAAGGCTCTGGGGAAGCAGAAGAAGACAAAGATAAAATATTTGCCATGATAACTGATTTATCACAGAGAAATACTACAGACCCCCGCGTTACTTCAGACACCAGCAAGATCATGATCACGGAGAGCCTTGTGGATGTTCCTACAACCACTGTATATTCAATTTCTGAACAGGTTTCTGCAGTAGTGCCTACCAAATTTGTAAGGGAGACAGACACTTATGAGTGGGTTTTCAGTCCACCTCTGGAGGAAACAACAAGGAAAGAGGAGGAGAAGGGAACTACAGGTACAGCTTCTACAGTTGAGGTACATTCCCCTACACAGCGATTAGATCAGTTTGTTTCACCCTCTGAGTTAGAAAGCTCAAGTGAAACTCCACCTGATGATTCAGCAGCTGCTACTAGGAAGAGTTTCACGTCCCAGATGACACCCACACAGTCTGAAAGGGAAACGACAAGTTCTACTGTTGTCTTTAAAGAAACAGAAGTTTTAGACAATCTGGCAGCACAGACCACAGATCCCAGCCTTAGCAGTCAACCTGGGGTTCTGGAAGTGTCACCTACTGTCCCAGGGAGCCCCGTCTCTCTCTTTATGGAGCAAGGCTCCGGAGAAGCTGCTGTTGACCCAGAAACCACCACTGTTTCTTCACTTTCATTAAATATAGAGCCTGAAATTCTAGCTGAAGAGGAGGCAGCTGGCACTTGGTCTCCAAATGTGGAAACTGTATTCCCTTTTGAGCCAACCGAACAAGTCTTAAGTACTGCAGTGGACAGGGAGGTTGCTGAAACTATAAGCCAAACATCTAAGGAAAACTTGGTTTCAGAGATCTCAGGAGAGCCAACTCACAGGGCAGAAATAAAGGGCTTTTCTACAGATTTTCCTTTGGAGGAAGATTTCAGTGGTGACTTCAGAGAATACTCGACAGTATCTTATCCCATAACAAAAGAAGAAATAGTGATGATGGAAGGCTCAGGGGATGCAGCATTTAAGGATACCCAGATGTTACCATCTGTAACACCTACCTCGGACCTCAGTAACCACACTGCTGACTCGGAAGAACCTGGCAGCACCTTGGTCAGCACCTCAGCCTTCCCTTGGGAAGAATTCACAGCCTCTGCTGAGGGCTCAGGTGAGCCCTTGCTCTCAGTAAGCAGCTCTGTTGACCAAGTGTTTCCCAGTGCCGCGGGAAAAGCCTCTGGAACAGATTCCCCATTTATTGACCAACGATTGGGAGAAGAAGGTGCTATCAATGAAACTGATCAAAGATCCACCATTTTGCCAACAGCAGAAGCTGAGAGTACTAAAGCTTCAACCGAAGAGGGGGAGGTGAAGGAGAATCACACAGTTTCAATGGACTTTCCCCCAACTGTGGAGCCAGACGAATTATGGCCTAGACAAGAAGTCAACCCTGTAAGGCAAGGAAATGGAAGTGAAATAGTATCAGAGGAAAAGACTCAAGAGCAAGAATCTTTTGAACCCCTTCAAAGCTCTGTTGCACCAGAACAAACAACTTTTGATTCACAGACATTTCCTGAACCTGGACTCCAAACCACAGGTTATTTCACACTAACGACAAAGAAAACTTACAGTACTGATGAGAGAATGGAGGAGGAAGTCATTTCCTTAGCTGACGTGTCCACTCCAACTCTAGATTCAAAGGGCTTGGTATTGTACACTACTCTCCCTGAAGTTACTGAAAAATCCCATTTTTTCTTAGCTACTGCCTCAGTGACTGAATCAGTACCAGCTGAAAGTGTAATTGCAGGTTCAACCATCAAAGAGGAAGAGAGTATAAAACCCTTTCCCAAAGTTACGAGCCCGATAATTAAAGAGTCAGATACAGATCTTATATTCTCTGGACTGGGATCTGGGGAAGAAGTTTTGCCTACTCTAGGATCAGTGAATTTTACTGAAATAGAACAAGTCCTTAGCACATTATATCCCCTGACTTCTCAAGTACAAAGTTTAGAAGCCAGCATCTTAAATGATACAAGTGGAGACTATGAGGGAATGGAAAATGTAGCAAATGAAATGAGACCACTCATTTCCAAAACAGACAGCATTTTTGAAGATGGTGAGACAGCATCCAGCACAACACTACCAGAAATTTTAAGTGACGCCAGAACAGAAGGGCCCTTCACGGCACCTCTCACTTTTTCCACAGGCCCCGGACAGCCTCAAAATCAGACGCACCGTAGGGCAGAAGAAATCCAGACCAGTAGACCACAGCCTCTGACTGATCAAGTCTCTAGCGAGAATTCTGTGACAGCAGAAACTAAAGAAACAGCAACCCCTGCCACTGATTTTCTGGCTAGAACATATGATCTTGAAATGGCCAAAGGATTTGTTACATCAACACCGAAACCATCTGACCTGTTTTATGAACATTCTGGAGAAGGTTCTGGGGAATTGGATGCCGTTGGTGCAGAAGTCCACGCTTCTGGAATGACTCAGGCAACTAGGCAAGGAAGCACCACATTTGTTTCTGATAGATCCCTGGAAAAACATCCCAAGGTTCCAAGTGTCGAAGCTGTTACTGTTAATGGATTCCCGACAGTTTCAATGGTGCTGCCGCTTCATCCTGAGCAGAGAGAAGGCTCTCCTGAAGCAACCGGCACACCGGCAAGCACAGCATCATATGAGAAGGCCACAGAAGGTGCGGCAGATAGTTTCCAAGACCATTTCTGGGGATTCAAGGATTCCACGCTGAAACCCGACAAAAGAAAAGCCACTGAAAGTATTATTATAGATCTGGACAAAGAGGACAAGGATTTAATATTGACAATGACGGAGAGTACCATCCTTGAAATTATACCTGAGCTCACATCAGATAAAAATACTATCATAGATATTGATCACACTAAACCAATATATGAAGACATCCTTGGAATGCAGACGGACTTGGATCCAGAAGTACCCTCAGGACCGCCTGACAGTAGTGAAGAGAGCACTCAAGTTCAAGAGAAGTATGAGGCAGCTGTTAACCTGTCTTCAACTGAGGAAAACTTTGAGGCTTCTGGTGATATTCTGCTGGCTAATTACACTCAGGCAACACCTGAATCGAAGGCTCCTGAAGACAGAAATCCATTAGATCACACAGACTTTATCTTCACGACTGGGATCCCCATTCTTAGCTCAGAGACAGAATTAGACGTTTTGCTTCCCACAGCCACATCTCTGCCCATTCCTAGTAAGTCTGCCACAGTTAATCCAGAGTCAAAAACTGAAGCCAAAACCCTGGAGGACATCTTTGAATCAAGCACTTTGTCTGATGGCCAAGCTATTGCAGACCAAAGTGAAGTCATATCAACGTTGGGCTATTTGGAAAGGACACAGAATGAGGATGAAGCAAAGAAATATGTAAGTCCCTCTTTCCAACCAGAGTTCTCTTCTGGGGCTGAGGAGGCACTGACAGATCCTACCCCCTACGTAAGTATTGGTACTACCTACCTTACGGCTCAGAGTTTAACAGAGGCACCTGATGTGATGGAAGGAGCCCGTCTGCCGGATTCCATCGACACATCCACAGTTTCAGCTTTTTCAGAGCTGCTCTCTCAGACACCATCATTTCCTCCACTCAGCATCCACTTAGGCAGTGGAGACTCTGAGCACTCAGAGGACTTGCAGCCAAGTGCTCTGCCAAGTACAGATGCCAGCACACCCCCAGTATCCTCAGGAGAACTTGCAAACATTGAAGCGACTTTCAAACCCTCAAGTGAAGAAGACTTTTACATAACTGAGCCTCCATCCTTACCTCCTGACACAGAGCCTTCAGAAGATGAAAGTAAGCCTAAACTATTAGAACCAACAGAGGCTTCTGCCACAGAACTAATTGCTCAAGAAGAAATTGAGATTTTCCAAAATTCTGACAACACAACCAGTGTCCAGGTTTCTGGGGAAGCAGTCAAGGTGTTTCCCAGTATTGAAACCCCTGAGGCTGAGGCTATTGTCACAGCTGCAAGTGAAACGAAGTTAGAAGGTGCTACACTGCGGCCACATTCTACTTCTGCTTCTGTGATTCACGGGGTCGAGGCAGGTGTGGTGCCTCAGCCCAGCCCACAGACTTCTGAGCGGCCCACCATCCTTTCTCCTCTGGAAATAAGCCCTGAAACACAGGCAGCTTTGATCAGAGGGGAGGATTCCACAGTAGCGGCCCCCAAACAGCAAGTACCGACGAGGATGCTTGATTCTAATAAGCAGGCAACACTAAGCACCACAGAGTTAAATACTGAGCTTGCAACACCATCATTTCCCCTTCTGGAAACTTCTAATGAAACCAGTTTCCTGATTGGCATTAATGAAGAGTCAGTGGAAGGCACAGCAGTCTATTTACCAGGACCTGATCGTTGCAAAATGAACCCGTGCCTCAATGGGGGCACCTGTTATCCTACTGAAACTTCCTACGTGTGCACCTGCGTGCCAGGATACAGTGGTGATCGGTGTGAACTTGATTTTGATGAATGTCATTCTAATCCTTGTCGCAATGGAGCCACATGTATTGACGGTTTTAATACCTTCAGGTGTCTCTGCCTCCCGAGCTACGTTGGTGCGCTTTGTGAGCAAGACACGGAGACATGTGACTATGGCTGGCACAAATTTCAAGGGCAGTGCTACAAGTACTTTGCCCATCGACGGACGTGGGATGCAGCTGAACGGGAATGCCGTCTGCAGGGCGCCCATCTCACCAGTATCCTGTCTCACGAGGAACAAATGTTTGTGAATCGTGTGGGCCATGATTATCAGTGGATAGGTCTCAATGACAAGATGTTTGAGCATGACTTCCGTTGGACTGATGGCAGCACACTGCAATATGAGAACTGGAGGCCGAACCAACCAGACAGCTTCTTTTCTACTGGAGAAGATTGTGTTGTGATTATATGGCATGAGAATGGCCAGTGGAATGACGTTCCCTGCAATTACCATCTCACCTACACCTGCAAGAAAGGAACAGTTGCTTGCGGCCAGCCCCCTGTTGTAGAAAATGCCAAGACCTTTGGAAAGATGAAACCTCGTTATGAAATCAACTCCTTGATTAGATATCACTGCAAAGATGGTTTCATTCAACGCCACCTTCCAACTATCCGTTGCCTAGGAAATGGAAGATGGGCTATGCCTAAAATTACCTGCCTGAACCCATCTGCATACCAAAGGACTTATTCTAAGAAATATTTTAAAAATTCCTCATCAGCAAAGGACAATTCAATAAATACATCAAAACATGATCACCGTTGGAGCCGAAGGTGGCAAGAATCAAGGCGCTGATCCCTAAAATGGCATACACATGTTTTCATCATTTCAGCCAAAGTCCTAACTTCTTGTGCCTTTCCTATCACCTAGAGAAGTATTATCAGTTGGTTTGGATTTTTGGAACACCGTCCAGTCCAGTCATTTTGGGTTGCCGTGCTCCCAAAACATTTTAAATCAAAGTATTGGCATTCAAAAAGAAAGCAAACAAAAGAAAGGAAAATGAGAGCAGAATGGAACCATTTCCAGCCTAATTTCTTTAGTTTTCTATTTGCCTCCAGTGCAGACCATTTTATAATGTATACCAGCCTACTGTACTATTTAAAAAGCTCCATTTCAGCACCAATGGCAATGTAAATAAGATGATTTAATGTTGATTTTAATCCTGTATATAAAATAAAAAGTCACTGAGTTCAAGCATATTTAATGATGATTACGGAGCCTTAGAGGTCTTTAATCATTGGTTCGGCTGCTTTTTGTAGTTTGTTTAGGCTGGAAATGGTTTTCCCTGCTCTTTGTCAGCAAGACTGAAGACAGCTTTTGCTGGACAATTAACAAACACAAAATTTTGTAGGTCACTGTCCCATCTCCACCACAGGTACAGTTGGCTTCCATGTGATGCTGAAGCCTGGCTAATGGGATCCCAACGAAACTAGAGACTGCAACATGGAACTCTTTATTTTATATTATTTTTTTTTTTTTGCTGCGTTCCTTTTTTTTTCACTTACAAGAAAGGCCTGAATGGAGGACTTTTCTATGACCAGGAGCATTTTCTAGGGGTCAAAGTGCTAATTATTAACTCAACTGGGTCTCCTTTTTAATGGCTTTCTTAACACTAACTTGCAAGATTACAGATCAACACATTTCAAATGGATATAGACCTGGGGTTCTGGAGGGAGGGGGTTTGTTAAAACAACACACATTCAAAGAAAGAAATTTTGTATATATAACCATTTTAATCTTTTATAAAGTTTTGAATGTTCATGTATGAATGCTGCAGCTGTGAAGCATACATAAATAAATGAAGTAAGCCATACTGATTTAATTTATTGGATGTTATTTTCCCTCAAACCTGAACATTGACGTAGTTGGTAGTTATTTTTCGGTTTTAGCCTTTATATTTCCCTCACAGTTTGGAATCGTATAATCTAGGTACTCTGTCCCTGATTAAATAATGTGATGGATAGAATGCATTAAGTGTTTTATTATAAAGAAGAGTGGAAAAGTGTCTAGCTTTCAGCAAACGGTGTTTGCCCATTCTAAGCAAGGAGCACATATATAGAAATAGTATGGGCATTGCTTCTTATTAGGTGGAGTGTATGTGTTGAAATTTCTCCCTATCTCTTCCCACTCCATTTTCTCCCCTTAATTTGAATAAAATGACTGCTAAAGATGACTTTGAATTATTATCTGCTTAATTTAATGTTTAAAGAAACCCTGTGATGGAAAGAAAGCATTTAGGTGTCTTTCCTAATTTTAGTTTAGAATGATCTTGAGAGCTCAAGATAAAAAATAAAATGCGAATTGAAAAAGAGCAGACCCAACAGGGATTCTTTTTCTCAGAACCTCTTTTGACTAGAAGGAGCTACAGTAGCCACCGTCATACACCCTGTCTTTAGGCAAGTTTCCTCGGTTGCTGTGTTAAATGTGACCAACCTTTGGGTGTTCTAGAGCACAGAAGAACTCTGTGTCTACCTATGAGGTTTTTATTTTTCCTCTTTCATTACAATGCACATAATACGTTCCTGTATTTATATTATAACATGTATAGTGTAAAATGTGAATGATTGTTTTTTTTTTGTGAATGAAAATCTAAAATCTTTGTAACTTTTTTATACCTGCTTTTGTTTCACCAAAGAAACCTAAAATCCTTCTTTTACTAT EMBV3_32246 GCACCGCCAGCCTCATCGAGGACATCGACAGACTTAGAAAAGGAGAGTGACACACCTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25311 TTCTGCACTTCTTTGCGTTTACACAGCATAGGGTTCTTTTATGTCAGTCTCTAGGGATAC Gene BVV0101_050928 + 0 NULL GK000004.2:50323320-50335957 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187394 1 XLOC_113440 NonCoding TCONS_00187394 XLOC_113440 NonCoding NonCoding - 4:50331269-50331668 - TSS139762 399 1 TCONS_00187394_1 44 0.691729323308271 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00013238872765839 0 0 0 0 0 7.43927886115598e-05 0.000735764379970191 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0292674157621572 0.842200141091098 0.00514968318865332 0.91114235914528 CAACTGAATAACAGCAACCATCTTGGGAAAGTTGGCCACTGCTGTCAAAATGACCCAATACACATAGTCAAAATAACACAAAACACTGTTATAATTTCAACATTTTTTGTAATAGCGAAAGAGTGGAAAAAAGCCAATAATATATCACGGGGGCATTTTGTAAAGTATTGTATATTCACCAGTGAAATATCACACAGCTTTCTATGTATCCCTAGAGACTGACATAAAAGAACCCTATGCTGTGTAAACGCAAAGAAGTGCAGAATAATGTATATTGTTTACTACCTTTGTGTATGAAGCAGGAAATTAGAGTATGTATTCATGCATATACATTTGTGTTTTATTTATTTACTATTTGTATGTTCATTTGAATTTGCTAAATAAATAAAAGCTGGAATG TCONS_00181587 TCONS_00181588 TCONS_00181590 . 3' 2601 TCONS_00181587 TCONS_00181588 TCONS_00181590 . 3' 2999 EMBV3_36381 GATCACCCATGGAAAGGGGAGAAATGGCAATAGCTGCTCCTAAGGTATTACTTGCTATCC Gene GeneID:767858|MIS12:NM_001076969:189_cdna Constitutive 0 NULL GeneID:767858 19 GENE MIS12 NULL MIS12, MIND kinetochore complex component, homolog (S. pombe) EMBV3_03247 TGAGGTGCTGGAGTGTGTAAGCCTGGTGGAGCTGACCTCACTGAAGGGCAGGGAGAAGCT Gene GeneID:519017|APRT:NM_001025334:267_cdna Constitutive 1 NULL GeneID:519017 18 GENE APRT NULL adenine phosphoribosyltransferase EMBV3_09759 GCTCAAGTTTTTAGTCATCTATAGCATGCTTACTGGTGCTCAGCACAGTGCCCCATTCAC Gene BVV0102_037732 - 1 EMBV3_12299 GK000006.2:69608372-69768725 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40435 AAGCTATCTAACACAGAACCTGTAACAGAGGTGATTGAAGCCTCAGATGTTGTGCTAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25569 GGAAGGGAGCAGGAAGAAGTCAGCTGCTGTTCAACACATAAATCAGAGGATGCAGGCAAG Gene BVV0102_336230 + 1 EMBV3_42406 GK000011.2:87652885-87834503 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19798 GGGCGTTTCTCCTTGGGTTTATCCTGTTTGGTACTCTCTGGGTTTCTTGGACTTGGGTGA Gene BVT0102_014830 - 1 EMBV3_21178 GK000019.2:12538314-12570162 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00020011 TCONS_00064058 TCONS_00238893 TCONS_00251214 TCONS_00156637 TCONS_00249013 TCONS_00115687 TCONS_00115729 TCONS_00040697 TCONS_00141680 TCONS_00233559 TCONS_00238308 TCONS_00240534 TCONS_00220662 TCONS_00160965 TCONS_00187806 TCONS_00022065 TCONS_00032588 TCONS_00252354 TCONS_00020016 TCONS_00210648 TCONS_00232347 TCONS_00157441 TCONS_00189889 TCONS_00250931 TCONS_00251452 TCONS_00160991 TCONS_00108588 TCONS_00040584 TCONS_00201770 TCONS_00253720 TCONS_00207754 TCONS_00135548 TCONS_00056147 TCONS_00187583 TCONS_00019991 TCONS_00249282 TCONS_00170310 TCONS_00189806 TCONS_00190337 TCONS_00229354 TCONS_00152647 TCONS_00175849 TCONS_00079671 TCONS_00224114 TCONS_00056970 TCONS_00036946 TCONS_00230725 TCONS_00148670 TCONS_00255185 TCONS_00062742 TCONS_00117462 TCONS_00199613 TCONS_00165812 TCONS_00019962 TCONS_00008834 TCONS_00175821 TCONS_00020022 TCONS_00232966 TCONS_00198661 63 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_010689 XLOC_038784 XLOC_145559 XLOC_154157 XLOC_095097 XLOC_151956 XLOC_069856 XLOC_069898 XLOC_024513 XLOC_086108 XLOC_143041 XLOC_144975 XLOC_147198 XLOC_133979 XLOC_097858 XLOC_113849 XLOC_012736 XLOC_018828 XLOC_155295 XLOC_010694 XLOC_129158 XLOC_141832 XLOC_095896 XLOC_115926 XLOC_153874 XLOC_154393 XLOC_097884 XLOC_064493 XLOC_024400 XLOC_123415 XLOC_156659 XLOC_126269 XLOC_081771 XLOC_033950 XLOC_113628 XLOC_010669 XLOC_152225 XLOC_103556 XLOC_115843 XLOC_116372 XLOC_138849 XLOC_092412 XLOC_105628 XLOC_048555 XLOC_137410 XLOC_034773 XLOC_021259 XLOC_140215 XLOC_090550 XLOC_158117 XLOC_037469 XLOC_071628 XLOC_121266 XLOC_100652 XLOC_010640 XLOC_004391 XLOC_105600 XLOC_010700 XLOC_142448 XLOC_120315 Coding TCONS_00229354 XLOC_138849 NonCoding NonCoding - 8:2557529-2558613 - TSS170858 1084 1 TCONS_00229354_2 118 0.997232472324723 1 0 2.51027591171023e-06 0 2.13423121305016e-06 0 0 0 1.84450574633871e-06 0 0 6.46362951175192e-05 3.99413746252622e-05 1.55532181485613e-05 1.35645042964244e-05 0.00014489275163546 5.78133364332646e-06 0.002164817523245 0.00318171808389475 0.00462562329167112 0 3.31707035394452e-06 0 0.00320644011591593 0.00184796150768437 0.00222080368255703 0 6.49950411920376e-07 0 0.000293836862500732 0.00101979446118106 0.000306281287184322 XR_229156.1 LOC101907943 PREDICTED: Bos taurus uncharacterized LOC101907943 (LOC101907943), 2e-79 300 80.47 0.310885608856089 0 noncoding 0 0 0 0 0.044186773713356 0.68151882467206 -0.00421894400467007 0.937197478317913 GGGGTGTTTCACCTTGGGTTTATCCTGTCTGGGACTCTCTGGGTTTCTTGGACTTGGGTGGCTATTTCCTTCCCCATTTTAGGAAAGTTTTCAACTATTATCTCCTAAAGTATTTTCTCATGCCCTTTGTTTTTGTCTTCTTATTCTGGGACTCCTATGATTCAAACATTGGGGCCTTTAACATTGTCCCAGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCCTTTTTCTTCTTTCCTCTCTGCTTCACTTACTTTCATCATTCTATCTTTCACATCACTTATCCTATCTTCTGCCTCAGTTATTCTACTATTGGTTCTGAAAGGTTGTTGTTGAATCACGCGAAGACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGCGGCAGAAAGAGTACCCGCCTGCTAGTCTTCAGCTGGATGTTATATAGTCACTAGTAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGAATGGCACCAGGCCCCTCACTCATAAGATGCATTTTGGGATAGTCTTGGCGCCAAATGGTTTATCCTGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGACAGATCACCATACAAATAGTTTCATTTACATAGATTAGGAGAACAATATCCATACTGGTTTGTCAAGTAGGTTCTGGGCCAAGAGGCGGAACCAACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAAAAAGGCATTGGTTATCTCTAGGCTCAAGAATAGCTAACTTCAGGCGAAACCAGGTGTCATTATGGCCACACAGTATTTTAAGAGAAACCTCCCTTTAAATTTGTATAGAGAAGGAAAAAATATTGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGGCTATTTCCTCCATTTGGAGACCCCTGGCCTTCCTGCCTGTTACCCTCTCA TCONS_00226773 . 5' 692321 TCONS_00226773 . 5' 692321 EMBV3_11511 TACATATGCAATTTTAGGTCCAACCTGTCCCTTCTCCTGCCAGCAAACCCCACCACCCTA Gene GeneID:510489|SH3KBP1:NM_001128500:61_cdna Constitutive 0 NULL GeneID:510489 X GENE SH3KBP1 NULL SH3-domain kinase binding protein 1 EMBV3_19947 AGGGCTCCAGTGCTGACGTCTCAGGTAAAGGCAGTCCCAGTCCTGGCAAGAATAGCAACT Gene GeneID:538476|LOC538476:XM_002687938:5_cdna Constitutive 0 NULL GeneID:538476 5 GENE LOC538476 NULL similar to Protein FAM83F EMBV3_38474 GCCCCCTGTGGCCTCAACGTGCAACAGATCTACAGTTTCACTCGACAACATTTCCCCTTT Gene GeneID:788135|FOXR1:XM_002693081:421_cdna Constitutive 2 NULL GeneID:788135 15 GENE FOXR1 NULL forkhead box R1 EMBV3_17974 AGACCGACATCAGGGTGGCTTTCACCGACTATAAGCACTTCGCCGTCATGTACTTCGAGA Gene GeneID:514980|LOC514980:XM_002691704:60_cdna Constitutive 0 NULL GeneID:514980 11 GENE LOC514980 NULL similar to Epididymal-specific lipocalin-9 precursor (MUP-like lipocalin) EMBV3_10997 CGAGGTGGAGTTTCCGTTATATGCACCTTTAATGAAAGAGGAGCTACTGCCCCCATGCTG Gene BVT0102_028874 + 0 NULL GK000011.2:38095814-38099201 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027587 TCONS_00027590 TCONS_00027585 TCONS_00027586 TCONS_00027588 1 XLOC_015283 Coding TCONS_00027588 XLOC_015283 Coding Coding SMEK2 11:38096094-38155507 j TSS19516 10927 1 TCONS_00027588_18 813 0.189439004301272 16 0.816350232276308 0.000638507225530219 0.00064003024591274 0.000607053414771896 0.000528114684824927 0.000542462195646467 0.000312330874774769 0.000503948374686185 0.000558762472103535 0.00115835399196177 0.000403165986332261 0.000341757039609446 0.000219459754055581 0.000174926719957832 0.000395597111413829 5.18774075564858e-05 0.00119070296923114 0.000295119333141288 0.000928621581644897 0.000431669617471777 0.000197385797244421 0.00011951453608393 0.000478438297067899 0.000539592788378567 0.000577240578090034 0.000347055227642661 0.000217882618201376 0.000277728725393505 0.000205578841494714 9.74208462569686e-05 0.00018495319935395 XM_005212614.1 SMEK2 PREDICTED: Bos taurus SMEK homolog 2, suppressor of mek1 (Dictyostelium) (SMEK2), transcript variant X2, mRNA. 0.0 9187 100.00 0.466093163722888 NM_001282850.1 SMEK2 Homo sapiens SMEK homolog 2, suppressor of mek1 (Dictyostelium) (SMEK2), transcript variant 3, mRNA. 0.0 6017 87.15 0.447606845428754 TCONS_00027588_18 sp|Q922R5|P4R3B_MOUSE P4R3B_MOUSE Serine/threonine-protein phosphatase 4 regulatory subunit 3B; 0.0 1550 95.49 0.998769987699877 0 coding 0 0 1 1 -0.0687310835999451 0.56983403829218 -0.00478575362087624 0.92503825154796 CCTTATCTTCAGACTTTGTGTTCACATGAGCCAATGAGTTCTCTTATCATTTAAACTAAAGTGAATTAGGTTTTTTGGTACATTCCAAGGGGATATGGAAGGAAGTCAAGGAAGGCTCCTCTACATAAATGATAATTGTAGTGACATCTGAAGGATAAAGCAGGAATCATCATGAGATGATTGGAAAGAAGGAAGTTCAGACAAAAATGTCAATTTTAACTTAGATCAAGTAAAACAGGTTGGAAGATGTGGGCATTATCAGGTCTTTAGTGAGTTTAACAAGAGCTTTTTGGTGAGGGCTGAGTGATGGAAACCAGAATGTGTGTGTGTATGCGCATGCACGCGTGCTCAGTCTTTTCAGTTGTGTCCGACTTTTTGTCACCCTATGAACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTTTCCAGGTAAAAATATTGGAGTGGGTTACTCTGCCCTCCTCCAGGGAATCTTCCCAACCCAGGGATCAAATCTGAGTCTCCTGCATTGCAGGCAGATTCTCTACTGCTGAGCCACTGGTGAAGCCCAGAAATCAGAATAGATAGGTTCAATTAAGGAGTGAATGGTGAGGTGAGGAAATGAGTTTGGCTGAAAAGAGGCAAAGAAATAGGAATATCAGTGAAGAAGATACAGGTTATCAGTTTTGATGACTTTTTAAATGGGGATGGCCTTAAAGATTAGTCACCTCAAGGAAAAGCTAATTATACAGCAAAAAACCTCTCATAAAAGTTTTTTCATAAAAATATCCGGGGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCTGGAAATCCCATGTAGGCTGCAGTCCATGGGGTCGCAAAGAGTCAAACACAACTGAAGCAACTTTTACTCTGTAGAGAGAACTATTTCTAATCCTTAAGAATTAAAAAGTGTAATGTACTCTCAAGAGACATTTGGCAAGGATGAGAGATAATTCTGATGATTACAACAGGAGGATGAGGTGCAATACTACTAGCATCTGGTGGGTAGAAGCAAAGAAATGCTGCTAAACATCCTGTGATGCACAGGACAGCCTCTCACAACATAGAATCATCCAGCCCAAAATTTCAGTGATGCCAAAGTTAAGCCCTGCTCTGGGAATTTAACCCACACATGTGTTGACACACATAAAACTACTTTTGTACAATCATTTATTGTTTGAAATTACAAAGTACTGGAAATGACATATGTATATATAGAAGGTTTAAACAAACTAAAGTACACTAGAACACCAGTACGTATGATATTCCATTATTTGTGTTTAAAAAAGAGTGGTAGAAGTAAATGTTACATATATAAAGATACCTATCTATCTTAGCCTTTGGGGTTGAACCGTCCTGAAAAAAATTTTTGCTGGGAAAAACACAGTGTTGCAGTGCATTACTGCCCTCAGTATATTTTAGAGACTCTTGCTCTGGCCTTCTGTCTGTGCTTCTCTCCATGGGATGAGAAATCAGTGAAACCAATGGATGTGTCCAGCTGGAATCCAGATCATGCTCTGGCCACCCTGGAATTCCTTGTCCCAAAGGCCAACCCTGCTCCCAGGGTCTGCACAGTCCTCTTCCCAAATTCTGTCCTCTTGAGGACAGCCAAGGGTGACTACATTCAGGGAGTGCAAACATAGAAATTTGGACAAAAGGTTAGGGTATCCTATTTGTGTACATGAGAGCTGTCAAAGTGCAAGACAGAGCTGAAGTGTTTCAAGGGCCAAAGGGAGAAGGTGGAATTCTGAAGAGTTCAAGAATTCTGGATTTGAATCGAGCTTCCAGACCATATCAATATACATTTCTCAAGGTATGCCAAAGGTAGGAAAAGAAAATACATTTTTATTTAATAGATTGATTTAAAAAATTAAATCTTTAGACATATAGTATACGTTCCTCCATTTGTATGCTTGTCCTGGATCTTACCAATCTTAGAGGTCGGCCTGTTGCAAAAGAGAGAGAGAACCCCTGTGACCTAGAACAAGAAAGAAACAGAACCTGGGCCAGAGGATCCAGCAAGGGTCAGAGATGAGTCCCGAGGGTTTAACTCTGTTCCCTATTTCTCTGTTCCCTTATTTCAGATCTTGGGGAGTATAGCAGAAAAGGGATACTATAGGAAAGATGGAAGCGATGCTTTGAAACACTGCTGAGATCATTTCATTCCTTAGTTCAAAACTCCCCAGTGAATTTGCAACTCATTCAAAGTAAAATCCGAGGCCCCCAAAACGGCCTCTCTCCCACTCCCAACTTTACTTCCCACCACTTCCTCCCTTTCTCACTCCACTCCAGTCACACTGGTTTCCTTGCTATCCCTCTCACTCAGCATGCTACAGCCTCAAGGCTTTGTACTTGGAGTTGCTGTTTTCTGGCTCTCTCTGCCCCCAGGGATTTATGCATAGCAGACTGCCTCCCCTCAGAAGCCTCCCTCAACGAACATTATTACCCTTCCCAAACTCACTCTCTGTCTGCTAATCAATTTTTTTTTTCCTTTGGTCATAACATTTACCAGTATCTAGCATAGATTTGTTTATTGTCTTCCTACACTAGAATGTGGGCTTCCCTTGTAGCTCAGTGGTGAAGAATCCACCTGTAATGCAGAGGACACGGGTTTGATCCCTGGTTCGGTAAGATCTCCTGGTGAAGGAAATGGCATCCTACTCCAGCATTCTTGCCTGGGAAATCCCATGGTCAGAGGAACCTGGCGGGCTACAGTTGATGGAGTTGCAAACAGTTGGACACAACTGAGGGACTAAACAACACTAGAATGGAAGCGCCATGAAAAGAGGAATTTTTTTCTATGTATTCACTGAATGGAACAGTGTCTAGCACATAGTATACACTCAATGAGTGTTTGCTGAATACTGACTAAATACAGGAAATGACTCCTGTGATTTTAATTTTTTCCAATTAGATCTTCTTTATAGGATATTAAGCTCTTAACATATGGTGTCAAAGTGACTTCTATATAGTTCTCATTCTCAGTACATAATCTGCTCATAAATTCTTTTAGGCCAGTAACACATTATGACTTTGTTTACCTGGTCCTCACAGCCTTAAACACCTTTCAAGCCAAACTTCCACTCAGGGATCCTCTAACATCAGGTCCAAAAGTTACCGGTGTGAAGCCTTCTCTGACCTGAGATAGAGATATTATTTTCTCCGGGCTCAAAATGCATTTTGTATTTTGTGCACATTAGTCACGGCAATTAATGTGCTCTTTTGCTACATATATTGCACGCATCTGTGCTCAGTCACTGTCATTTCAGACTCTTCTGTGACCCCATGGACTGTAGCCAACCAGGCTTCTCTGTTCCCGGAGTTTTCCCGGGCAAGAATACTAGAGTGGGTTGCCATTTCCTTCTCCACAGGATCTTCCCCACCCAGGAATCGAACCTGCATCTCGTCTCCTGCAATTCTTTACCCCAGCGCCACCTAGGAAATCCCCAACATATACAACTACTTAAATTCAAGTGTATTTTGGTAGGTTCTCTTTAGAGTAAAAGAAATCCCTATGTAACCAGATTTTGAAATGAGAATTTTTCATCAGGAGCTTACTCTGTGTATGCATGTCACGTGTCAGTTCGTATGCTGGGTTTACGCACAAGATTTGGTAAAAAGAGAAGCACGTTTTGACAACATCATTGGTAAGGAATAACTACAACTCCCAAGATGCGCCGCAGGGTAAAACCTGTCCATCTCGCTCGATTTTCACCCTTCAGACTAAAGGGTTGTTAAGAGCTGGCGGCAGAACAAGCTGGAACTCTCTTTAAAAACAAACAAAAAGAATCTACCAAGAACGAACAGCGACTGACAAACAATACAGCGCACGGCTCGTATCTACCGCGCAGTGTCTGACAATGTGATGTGTGACAACCGACGCGAACGCCCAGAGAATTGCTCCCTCGCTTATTCAGCTCGGAAGACCTCCCGAGAGAGAACGCTAGAAATGCCAGCAAGAGACACTCAAAGATATGGAAACAGTGCTCTTAGATGTGTTAGGAAGGTAGTTCCCCGCCACTTGCCTAAACTTATCTGAAGACTTATGTTCCGAGGTTACCGACGCAGGAAGGACACTGTTTTCAAGAAGCGGAAAGTATGCCAGCCACCAAAAGCTTGACGGTAAAACGCCTGAACGAGAAATAAATTGTCAATGCACTTTTGTACGATGTTATAATCTCCTGGAGATCCACAGAACACTTCCTGAGGAGATGCTTAACTGTAGCAGACTCCTTAGCGAGTTTTAGTGGGTTTCGAGTCCCATTAAAGGGCTAACGTCTTCACAGAAAGAGGTTTAAACTATTTTTCTCTCACAGGCTGAAAGGGCGAGCTTCCATTATGGAGTGTGAGCACATTTCCTTCCCTTCTGCTCACGGTGAGTCCCGTCCAAGGATGCGTACCTCCCAGACTTGCTTCGTTTTTTCCACAGAGCTGGATCCCACGGCTCCTTACACGCCGGGCGCAGCCCCAACAAACCGCCAGAAGCCGAAACCACAACTCCGCTCTCGCCGCCAGTCCGGAGAAGAGTCTCGCGGCACCAGCGGAAACCCGAAGCTCGCGAGAACCGCCCACCTGGCGAGAGCCCACGCCTGCAGGCGGAGCCGAGAGAGGAGGAAGTCGCACTTAGACCCACCCATCTTACTCCACTACCCCTCCTCGCGAGAATACTGAGCACGGCCAACGCGGGTAGCGCGTGCAGAAACGGAGGCGTCACACGTTGGACTCGTCGGCCGCCGTAGCCCCTGCTAGGACAGCCCGTGCGAACCTGCTGGAGGAGGAAGAGAAAGGCAGAGAGAATCGGGTTACAAGATGGCGGGTCTTTAGTAGTTACCGCGACGGCGGTGGCGGCGGCGGCGGGAGAGCGAGCGAGCTCTGGGGGGTAAAGGGTGGGGAGGGTGGGTGCGTTCGGGGGTGAAGTGAGAGGTAACTGGGAATCTGGGCGGCAAGGTCTCAGTGGCTCCTGTTGCCCTTTCCCGCGGCTGAACCTGGGAGCCATGGTGAACTCGGGCCTCTCCGGAGCCGCCGCCGCCGCTGCCGCCACCGCCGCTACCGTCTCTCAAGAGTGAGGGGCGTAAAGGAGGTGAGCAAGGAGGCGGCGGCTGGAACAGTGGGGACCGCAGTCACCATGTCGGATACGCGGCGGCGAGTGAAGGTCTATACCCTGAACGAAGTTCGGCAATGGGACGACCGAGGCACCGGGCACGTCTCCTCTATCTATGTGGAGGAGCTCAAGGGAATGTCGCTGCTGGTTCGGGCAGAGTCCGACGGATCACTACTCTTGGAATCAAAGATAAATCCAAACACTGCATATCAAAAACAGCAGGATACATTAATTGTTTGGTCAGAAGCTGAAAACTATGATCTGGCACTAAGTTTCCAGGAAAAAGCTGGCTGTGATGAGATCTGGGAAAAAATTTGTCAGGTTCAAGGTAAGGATCCATCAGTGGAAGTCACACAGGACCTTATTGATGAATCAGAAGAAGAACGATTTGAGGAAATGCCTGAAACCAGTCATCTGATTGACCTACCCACATGTGAACTCAATAAACTTGAAGAGATTGCTGACTTAGTTACCTCAGTTCTCTCCTCACCTATCCGTAGGGAAAAGCTGGCTCTGGCCTTGGAAAATGAAGGCTATATTAAAAAACTACTGCAGCTATTCCAAGCTTGTGAGAACCTGGAAAACACTGAAGGCTTACACCATTTGTATGAAATTATTAGAGGAATCTTATTCCTAAATAAGGCAACTCTGTTTGAGGTTATGTTTTCTGATGAGTGTATCATGGATGTCGTGGGATGTCTTGAATATGACCCTGCTTTGGCTCAGCCAAAAAGGCACCGAGAATTCTTGACCAAAACTGCAAAGTTTAAGGAAGTTATACCAATAACAGACTCTGAACTAAGGCAAAAAATACATCAGACTTACAGGGTACAATACATTCAGGACATCATTTTGCCTACACCATCAGTTTTTGAAGAGAATTTTCTTTCTACTCTTACATCTTTTATTTTCTTCAACAAAGTTGAAATAGTCAGCATGTTGCAGGAAGATGAGAAATTTTTGTCTGAAGTTTTTGCACAATTAACAGATGAGGCCACGGATGATGATAAACGACGTGAATTGGTTAATTTTTTCAAGGAATTTTGTGCGTTTTCTCAGACATTACAACCTCAAAACAGAGACGCATTTTTCAAAACTCTGGCAAAGTTGGGGATTCTTCCTGCTCTTGAAATCGTAATGGGCATGGACGATTTGCAAGTCAGGTCAGCTGCAACAGATATATTTTCTTATCTAGTAGAGTTTAGTCCATCCATGGTCCGAGAATTTGTAATGCAAGAAGCCCAACAGAGTGATGACGATATCCTTCTTATTAATGTAGTAATTGAACAAATGATCTGTGACACTGATCCTGAGCTAGGAGGTGCTGTTCAGTTAATGGGACTTCTTCGTACTCTAATTGATCCAGAGAACATGCTGGCTACAACTAATAAAACTGAAAAAAGTGAATTTCTAAATTTCTTCTACAACCATTGTATGCATGTCCTCACAGCACCACTTTTGACCAATACTTCAGAAGACAGACGTGAAAAGGATAATGTAGTTGGATCTAACAAAAGCAGCACGATTTGCCCTGATAATTATCAAACAGCACAGCTGCTTGCCTTAATTTTAGAACTACTCACATTTTGTGTGGAACATCACACGTATCACATAAAAAACTATATTATGAACAAGGACTTGCTAAGAAGAGTCTTGGTCTTGATGAATTCAAAGCACACTTTTCTGGCCTTGTGTGCTCTCCGTTTTATGAGGCGAATAATTGGCCTTAAAGATGAATTTTACAATCGTTACATCACGAAGGGAAATCTTTTTGAGCCAGTTGTAAATGCTCTTCTGGATAATGGAACTCGGTACAATCTATTGAATTCAGCTGTTATTGAGTTATTTGAATTTATAAGAGTGGAAGATATCAAGTCTCTTACTGCACATATAGTTGAAAACTTTTACAAAGCACTTGAATCGATTGAATATGTTCAGACATTCAAAGGATTGAAGACTAAATATGAGCAAGAAAAAGACAGACAAAATCAGAAACTGAACAGTAACAGATTTCGCAGAGATGCAAAGGCGTTGGAAGAGGATGAAGAAATGTGGTTTAATGAAGATGATGAGGAGGAAGGAAAAACAGTTGTTGCACCAGTGGAAAAATCTAAGGCAGAAGATGATTTTCCAGATAGTTATGAAAAATTCATGGAGACTAAAAAAGCAAAGGAAAGTGAAGATAAGGAAAACCTTCCAAAAAGGACATCTTCTGGTGGCTTCAAATTTACTTTCTCCCACTCCACCAGTGCTGCTAATGGAGCAAACAGTACAAACAGCAAATCTGTAGTGGCTCAGACACCACCAGCAAGTTCTAATGGATCCTCTTCCAAAACTACAAACTTGGCCACATCCGTAACAGCCACCAAGGGAAGTTTGGTTGGTTTAGTGGATTATCCAGATGATGAAGAGGAAGAGGAAGAGGAAGAAACATCTCCCAGGAAAAGACCTCGTCTTGGCTCATAAAATATTTACTGGGGCCCCTCAACATGTGGTTGAACAAAAATGCTGCAACTGTTCAATGAGCTGAAAATCTGAATCAGAAAGCTTTCTCACTTGAACTTATAAGTATACAAGGAATAGAAAAAGACACTCAGTATATCAGCTAGGAGAGTTTAGTTCTGTAAAAAAACAAAAACAGGCTTCCCAGGAACTTGATCGCTTGCTAGTAATTAAGAGACTTGCCCTTCAGGATGTCAAAAAAAAAAAAAAGTTAGTAACCTGGGAGGTAGCTTCTCAGCAAGGAAACTCTCAGGTTTGGGGATGGTTTAGGGAAGGGATAAAGCTGGTAAGGTATCATTAATGTGGGGTTGCTCCATGGGGGTTTCTGATCTAGAAACAATTACAAAACTTCAGTTGCAAACCCAATAACATTACTTGTATAATGGTGCTGGCCATGTTGTTCTTTAATCAGTTGCCTCTGACTTTTATGGAAAACATTCAACTATCATTAAAAAATGAAGTTAAGCTGTTGGGACCATTTCTTTGAAGATCTAACAAATTCAGCCTTATTGGTAGTTGGAGGGAAATACACCCTGTGTTACAGCACATGTTGAGTTTTCTCCATCAGGAAATTTCAGTTGTGTATTTTGATGAAAACAAGCTGGATTAAAATGGACAGTTTTGTTACTGTAACTTTAAAATCAGCACTTTTAGAGAGAACAGATGCCAAGAATCAGTACAGTAGTATTCCAAAGTGATTTTCTCTAGAAACGGGAGTATATTGAACAGAACGTTTTCAACTGCCTACCAGTACAATCTTGTGGAAGATGCTTTAAAGTCACTTTCTACTTCGTTAGTAAAGGTTTCTCTGAAGAGCTGCAGGCACGTTTTAAGGTGTAATTTATAAAGACTAACATACAAAGAACAGTGCTGAATTAAGTGGCATTTAATATCTATAGGCCATTTTGGTCCAAGAAGTTACTTCAGTGTCAGTCAGTATGCAGCACCTGAAGCTTTTCCATAAACAAGGGTGTAATATGAAAGCTGCTTTTTTTTTTTTTTTTTTTTTTTTTAAGAATAAAAGCACATTCCATGTACGAAAATGAGTTTAAAATAATAAACTGAGGCAAACAGTTAAGAGGTTTTATTTTTAGAACAGCAAGTTAACTAAATATTTTAATGTTAGTTTGCTCATCTGTGATCTGAGATCATGCTGAAGTGAGAAAAACATCCCCCAAACTATAATACATTGGGGGGGGGAAAAAAGACTAAAATTAGTAATTCCAGCTACAGTCTTCAGATCACCTTTGTAATGTGTTATGGGTCCATTTTTCCTGGAATAGCTTAAACTGAAGCAGTTTCCCCTGTTTTGGAGATTTTGTAGTTAATTTTAATTTTGGCTATTGTTTGGAGGATGGGCTGTTGTGTAGATATGAAGTATAGTTTTTCCATAAAACAGATGTTTATTTTGTATTAAAAATACCACTGTACTTGTTTTACACCATTTGTATACATGTGGTGATATTAATGCTGACCTGTAAAATTCAGGAATTAAAATGTGACCCTGTAATTCTATGGTTGCTGCTTTTGTTTGGTTTGTTGTAAGTATAAGTAAACTTCATTTTGAGTTATGTTCATTTTACAGTATTTTTTAAAAGCCAGTATGTTTTCCATAGATACTTATTATAGACCACTGTGTCATAACACCAATCTGAATGAAAGAATTCTAAACAAAGGCCAACCTCACAGTAAATATCGCTGATACTAAGAGAAAGTATGCCTTGGGTCCTAAAGTCCTAGCACCGAAGGATCACAGCATGGGGGCAGTAGCTCCTCTTTCATTAAAGGTGCATATAACGGAAACTCCACCTCGTAACAGTCAAGTGACTCAGGAGAACTTAAACAAATATCAGTAAAGTTACTACAGGAAAACATTTTCTTTCAAGCAAGTTTTATCAAGCTCCTTCCCTCTTCTTAGTTCTTGTTAAATTTCCTCTTAGAATCTAAGAAGCCCAGCCTTAAAACATTTCCCTTTCTACTCTTGATTCTTCCTGGTAAAGTAACTTTGAGTTCCAGTAGGAAGTTTTATCTTTATCTTAGGAAGTTTTTCTTTCTGAAGAACTGCCACAGGTGAAACATGTGATGCATTATTATCATAGGAACCTTTTCTTATAGCATATTGTGAATATTTTCTTGAATTACAGGAAAACACTTTCCATGGTACAGATGCTCAGCCACAGTGAAATGAGAGCAAGACTTAAAAATATCGCTTGAAAGGATAACTTAAGATGGCATGTTAGCTGCTGTCCTAAATGACTACCCTCAGGCAGATCAAGATTTTTTATCTTCACTCAGTGAAGCAAGCCAGAGCCCACATTTGTATGCCTGAGGTTCTCTTAAAATAGTTATCTGTAAACATGTATGCAATATAAAACCTATTTTTAATAAAAAGCTTCATGAAATAAATTTCTGTGTTTCAATCACTAGTTTTCCACTTGTCCATGTAAGCGATGAAAATGTGACATATAAAGTAAGGCTGGGTTTTCTCTGCATGTTGACGGTTGGAACTAAGGTAATTTTGGTATCTCGTTTTGGGTGTTTTTTTGGAGGGGGCCATGCCTTTGGGCGTGTGGGATCTTAGTTCCCTGACTGGGGATGGGACCCACACCCCCTGCATTGGAAGCGTGGAGTCTTTCTAGTGGACCGTCAGGGAAGTGTTATAATCCCTTTTTAAAAGCTTATAACTATAGATATAAGGAAAAATGGAATTATAAATTAAACCTTGGGAGTGGCCTGTAACCAGAAAAGAAGGTGCTTACAGATGACACAAAACAGTTTCTGAAAGGAAGGTTTCTCCTACTATTTTGTGTTAGCTTTTAGCAAATGGACTACATACCACCCCAGGATCACTTCAAACACACAAGACTACACCCATGGCAGAATTCCCCCTCAAAGAGGCTCAAGCAATTGTTTCTTTATCTGTTTTAATGTTGCTTTTCTAGAAAGAGTAACTGAATATTTTGAACATCCCCCACATCTATTTTTGAAGTCCTATTTGCTGCTGCCTCAATGTAGGGTGCTAAATTCTGCCACAGAGAACCACTATTGCATTACATTGATTACCCTATACCTGTTCACCCACACCTACTCTTAACTCACCCAATCACCACACTGCAACTACACATCTTTTTAAAATGGACATTTTGATCATGAAACTTACCTGCTTTAAAATTTCTGTGACTTCCCACTACCATTATAAAATCTTTAAAACTCTCACATTCCCTATAGGCCTTGCAAGTGAGTACCCCACCTATCTCCAATTCCATATGCTAACCTCTTCTCATTGACTGCAGGATCCTGTTTATAACACTGCACTC EMBV3_21914 TTGCAGTCATCGGCAGGTATCTATGCATTCATAGAACTTCTAAAGGTCCCAGAATCACTT Gene GeneID:540353|RNF111:NM_001102239:112_cdna Constitutive 0 NULL GeneID:540353 10 GENE RNF111 MGC159818 ring finger protein 111 EMBV3_28926 GCCATCTGTAAGCCCTTGCATTATTTGGTGATCATGAGGCAGAGGGTGTGTGTTGTGCTG Gene GeneID:510722|LOC510722:XM_002692894:109_cdna Constitutive 0 NULL GeneID:510722 15 GENE LOC510722 NULL similar to olfactory receptor MOR231-1 EMBV3_09414 CAGGGTCACACGGAATAGCAGTACCCAAACAGTGTCGGACAAGAGCACGCAGACGGTACT Gene GeneID:613490|MGC151651:NM_001105432:255_cdna Constitutive 0 NULL GeneID:613490 10 GENE MGC151651 NULL hypothetical LOC613490 EMBV3_35533 AAGTACGGGCTCAAGATCCACATGCGGACGCACACGGGCTACAAGCCGCTCAAGTGCAAA Gene GeneID:510505|PRDM13:XM_002690162:31_cdna Constitutive 0 NULL GeneID:510505 9 GENE PRDM13 NULL PR domain containing 13 EMBV3_34445 GGCCTGGGCCAGATGACCCTCCATTAACCTCAAATCTCACTCTCTTGTTTACAGTCTGTT Gene GeneID:505886|IQGAP3:NM_001098880:85_cdna Constitutive 0 NULL GeneID:505886 3 GENE IQGAP3 MGC139205 IQ motif containing GTPase activating protein 3 EMBV3_25290 TGCAGGTGGAGACCATCTCTCCCGGAGACGGGATGCTTGAAGATGGAAAGAAATTCGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17126 GTGATGACCACACGCTGCTTTAGTGAGATGGCCTAGCCTGCTTGGAGAATGGATTGTAAG Gene BVV0101_058215 + 1 EMBV3_09502 GK000016.2:53049144-53064871 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10078 GTCCAGCCCACTTTAAGGAAGAGCCAGGACACTCACTGCAGTTTTATGCATCTCTTTGTT Gene GeneID:512993|WDR77:NM_001015584:92_cdna Constitutive 2 NULL GeneID:512993 3 GENE WDR77 MEP50 WD repeat domain 77 EMBV3_08201 CTGGGGAGGGGCGGAGGGTCTGGATCTTTTTTCAGAGCTCCGTTTAATGTCTGTTTCCAT Gene GeneID:513462|SIDT2:NM_001024530:68_cdna Constitutive 0 NULL GeneID:513462 15 GENE SIDT2 NULL SID1 transmembrane family, member 2 EMBV3_40199 GACCCCCGTGCAGCAGCCTTGGCCCTGGATTGCGTTTGCCTTAGCGGATATGTTTATACA Gene GeneID:514259|EFHD2:NM_001103245:109_cdna Constitutive 0 NULL GeneID:514259 16 GENE EFHD2 MGC139236 EF-hand domain family, member D2 EMBV3_00544 AAGGGTCCTCTAATGTGAAATGTACAGTGGAAGTCTAAATGGAGGTGATGATTGTCGTTG Gene BVT0102_199387 + 0 NULL GK000030.2:123972782-124007374 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084379 TCONS_00084386 TCONS_00084384 TCONS_00084385 TCONS_00229767 TCONS_00084381 TCONS_00084380 TCONS_00253987 TCONS_00084382 3 XLOC_051548 XLOC_139261 XLOC_156925 Coding TCONS_00084380 XLOC_051548 Coding Coding - 18:57656172-57683001 - TSS63215 4282 1 TCONS_00084380_8 469 4 0.840539734605636 0.0405501094178628 0.0281793251776275 0.0418107834461481 0.0173855122552235 0.0226084073643376 0.0033422009340258 0.0210385378770376 0 0 0.00156778954316369 4.26282572383648e-07 0.000577195102910093 0.00449514379565615 0.0152713683239324 0.00584679555410355 1.55070278093223e-08 2.82340479026258e-44 6.26431113339403e-34 0.0315628937945015 0.0290554048281621 0.00819353520644869 2.26155102656374e-16 5.70752170324558e-13 0.000128077771437412 0.0185408544876716 0.0139623963742992 0.0121952753923576 0.000122207100320767 5.07099037115923e-05 0.000585098041599878 XM_001787818.3 LOC788860 PREDICTED: Bos taurus zinc finger protein 479-like (LOC788860), 0.0 1205 73.10 0.489957963568426 NM_001256651.1 ZNF43 Homo sapiens zinc finger protein 43 (ZNF43), transcript variant 6, 0.0 801 73.49 0.310368986454928 TCONS_00084380_8 sp|A2VDQ7|ZN420_BOVIN ZN420_BOVIN Zinc finger protein 420; 3e-137 416 51.90 0.889125799573561 8 noncoding 0 0 0 0 -0.692510824680467 0.0240612736429091 -0.440208055814473 0.00123403644784711 TCCTGTGGGAGCATCAGTGTGGTGTGTAGGAAGTGCTCCAGGGGCTTCTAAGGGGAGGCCTGGGTTAAGGACGTGGCTCCTGGTCCATTTGTGAGAGCTGAGGCCTGGCTTCAGTCCAAGCAGAGGCAACAACTTCTGCTCTGCATGAGCTTTAAAGGGGCAAGTCAGTGCAGCCCACACACCCCATGTTAGCAGAATTTGGGGGACTTTATATGAAGAAAGAAGAGTAGACAACAACAACAAGTTGATAGATTGGTCTCCACGGAGGAGCTGATTGTCCTGAATCTCTCTCTGAGACAAAGGACAGGAGAGGTTGGCGTTTCCCGCTCTTTAGGTCCTTCTGCCTGTGAGGGTGTTGGGAGCAGGCGAAGGAGCTGTGCTGGCGCCTCTGAAGGTGTAATCTCATGACGCTGAGGTGATTCCTCCACAGTCTTGATGCGAAAACGACCCAGGGCAGCAGGAAGAAGAGGAGGAAATGGCAGCTTCTCAGGTCCCCTTTGGAGGAAAGGAAGAATCCCGGTGCTAGGTGTGAATGAATGAAGCGGATGACACAGGTGAGAGGTCCAAAGACCACAGAGGAAGCCAGACGTGTTCAGATGGTTTGGGGAGGCCTGCTTCACTAGAATGAGAAGCCTGGGTTTATGTCTGCCAAAGAGGGACATGACCGGCCCCGTTCTTCTGCTGTTTCATCTCCATCTTCTTCAGCTCCAGTGGGTTTTCCCTCAGTTTCACTGAGAGCCAAAACCGTCCTCCTGGTCTATGAGGACCTGCATACTCTCGCTGCTTTGGGGGACCTAGGAAAAGCTGCTAACAGTTCTGACAAACTCTGCCTTAAGGCCTTTCCAAATTTCCGTCTCTGCCTCAAGTCAGAAAAGAGTTGTGGAGCTCTGGGATTAGTTGACAAAATTCCAGAAATACTGGGAACAGATATATGCTTCCTGCTTTCTAATTTCCAATGGAAACTTCAAACATGGCTCTCTGAAGTTCATTCTCAGTCCCTGAAATCATAAAAGCGATATCTTCTCATGACACCCAGGGTTTGTTCCCAAAGAAGCCGTGCATAGGAGATTCATGTGTAATGTGCTCAGAAATTCTGAGAGCTCTCAGCTTGGAAATGTGTACTTAATGAAAGACTGGGAAAGTAAGGGGGGCTGTGAAGGGCCAAAAGGATGTTGTTTTAGATGTAACCAAATCGGGACAATTATTCATGATGAAAACATGATTGCCAAAAGAAATTGAGGATATGCATCAAATTGGGAAAAATTCCATTTGAAGTCAATAAGTTCTGCAGAAAAATATGTTTTTGTAAGCAAGAACCCACATGATTTAAAAAAAAAAAACAAACATATTCTCTGGTGTGAAATTTTGAAAACATGGAAAGTCATCTAGTCTATGCTACAAATAATCACTCAAACCAGTATGAATATAGGTTTGAATTAAACAGCCAGTCATACATGTCTGAGAGCCAGAGATTTGAAAATGAAGGAAGAAAATCTCACTATGATCAGTTTGAGAGATCCTTTAGTGAAGGCTCATTATTTTTCCACCAAGAAACATTTTCTCCCTATTCCAATATCTGTAATGTCAATAATAATGAGACAGTCTTTATCCAGCTGCCGTCATTCAATGGGTATCATAGTACAGATAATGCGGAACAACCTTCCATGTGTAATCCCATGAGTGAGGCCTTAAGCCAGAGCTCCACCTTCAATAATTACAACAGTATTTATGATGGAGCCAGAATCTACCCATGCCTTGAACCTGGGAATCACTTTGACCAAGACTCAGGTCTCATGAATCATCAGAGAACTCTATATTCAGAGAACCATAGTGATGAATGTAGAAATGTCTTTTATCAAAGCTCAAATCTTATTACAGATGGGAATATACATATTGAAGAGAATAATTACAAATTTAGTGAATGTGGTCAAGTTTCTAACCAGTCATCAGAACTTACTCAACATCTGAGTATTCATGCTAAGGAGAAACACAGCAAGTGGAATAAATGTGGGAAAGTCTTTCCTCAATTATCAAATCTAAATAGACACAGGAAAATCCACACCGGAGGGAAACGTAACCAATGTGCAGAATGTGGCAAAACCTTCAGCAAGCCCTCAAGCCTTACTCAACATCTCACTGTTCATACTGCAGAGAAGACTTACAAATGTCCAGAATGTGGCAAAGCCTTTAATCAGAGCTCAAACCTTAATCGACATAGGCGAATCCATACTAGGGAGAAACCATATAAATGTCAGAATTGTGGGAAAGCCTTTAACCAAAGTATAACACTTATTCAACATCAGCAAATCCATACTGGGGAGAAACCATACAAGTGTAAAGAATGTGGCAAAGCTTTTATCAGTTGCTCAAAGCTTAATCAACATCAGAGAATTCATACTGGGGAGAAGCCTCACACATGCAGAGAATGTGGGAAAGCCTTTAATAGTTGCTCACATCTCACTGTGCATCAGCGAATTCATACTGGGGAGAAGCCTTATAAATGTACAGAATGTAACAAAGCCTTTAATCATCACTCAAACCTTACCCGTCACCAGAGAATTCATGCTGGGAAGAAACTATACAAATGTACAGAATGTGGCAAAGCCTTTAATCAAAACTCAACCCTTACTCAACACCAGCGAATTCATACAGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCGAAACTCAACACTTACTCAACATCAGCGAATTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATTGAAACTCAACACTTACTCAACATCAGCGAATTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCAAAACTCAACACTTATTCAACATCAGCGAACTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCAGAGTTCAAACCTTAGTCGACAGGTGAATTCATACTGGGGAGAAACCATACAAATGTAAAGAATGAGGCAAAGCTTTTAATTGCCACTCAAATCTTACTTGCCATAAAATAATTCATACTGCCAAGTAGTCTTACAAATATAAATAATAGGACAAAGCCTTGAAGTGAGCCGTCACCTCACTCAGCATCAGAGAGCGTGTGCTGGAGAGAGACCCTACAAACGTAGTAAGTGATGAAAGAGGTTTGTCCTAAGCACACACATCAGAAAATGCCAGAGAGTTCATACTGGGAAGAATGCTTAATGCTGTAAAAAATGTACAAAATGAATTTAAAAACTCAGGTCTAAATAAATATCAGAGAATTCATCAAAGATAGCATTCATTCAATAACCCTTTTCTGGTATTACTTTAAATCAGGATATTATAGAAAATAATCCAAAGTGAAAACACTTAGAAAAATTATTTGTTACTTGGACCATAGGATCAAGGCAAGAGATGTTGGACAACATAATTATTATCATTGTATCCTTATTCATATTGACAGTATGTGAAAGTGAAATTTAATATAACTCAACTTTCAAATTACTATGTGCTATACCTTTAGTGTGTATGTGAATATGCTTTTTTAAAACTAATATTCTTGATCTTTGCTGCCTCAAAGTTAAAACCCTTCTATAATAGGTGGAAATAATTTTTATCTACTTTTTTATGTACTATTAAGGATCCTCTAATGTGAAATGTACAGTGGAAGTCTAAATGGAGGTGATGATTGTCATTGTTTAAAACATCCCTCTACGTCACCGCTAGGTAAGTGTTCAGAGAATAATTCTTTGTATTAAAGTAAGACAGAGAGTCGAAATTTTAAATAGTTGTGCCAATGGTTTTTTATGGATATAAAGATGGCAGCTCACTGAAATCCTGATGTATTTTTATAACAGCAATAACTAGAAGTCATGAATTTTAGTTGACATGGTAACAATCAGGAAATCTTCACAGATACCCAAGAAAAATACATGTAACCTTTTCCTGAAAGGTGATGTAATGAATGTACATCCTTGTTTACTAAATAACTGCTCTCTCTGTTTTGTAAACCATAAATATCACATTTCTCTGACCACTGTATCACAAGAACAAGAATGTTTCCAAATGCTTGTAATCTGTATTTTGATCAAAGATTATAGAGTAAACTTTGGAAAGTTTTATTTAGATTATGTGTGAATTTACTATATGTTAATCAATAAAAGTGAACGGCTTTTCATATATTAAACTTGATGTATATTTGAAGAAGTGTTCTCATCAGTAACAAGCTTCCAGGTGGTTCAGTGGTAAAGAAC TCONS_00084375 s 3' 7780 TCONS_00084375 s 3' 7780 EMBV3_18736 AACTTTTTGAATTAAGTGATAAAAAGTACTCATAAGAAAGCATTTTTTTGTTTTTGCATA Gene GeneID:616544|RG9MTD2:NM_001035477:17_cdna Constitutive 2 NULL GeneID:616544 6 GENE RG9MTD2 MGC128771 RNA (guanine-9-) methyltransferase domain containing 2 EMBV3_41689 GCCATGCCTGTGAATTCCTGATGTCCCAGCTGAGTGCTTCTGCCTCTGAACTCTAAAAAG Gene BVT0102_137496 + 0 NULL GK000019.2:40131375-40140807 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093772 TCONS_00093773 TCONS_00093774 1 XLOC_057250 NonCoding TCONS_00093774 XLOC_057250 NonCoding NonCoding - 19:40133526-40136074 - TSS70273 1970 2 TCONS_00093774_4 70 0.0857868020304569 2 0.227326266195524 0.00291846012662623 0.00284932177809749 0.00271858476299314 0.00587507299468885 0.00302491512579158 0.000377825006705394 0.00306061956036285 0.00306014704508297 0.00257604681672327 4.60459118399181e-09 0 3.67820701065967e-09 0.000296263659586462 0.000523805836015093 0.000161878649894121 0.00119398442175601 1.63299065087195e-08 2.47781108597597e-08 0.00256504633523131 0.00519188465649128 0.00230774130773548 5.03875699830363e-12 8.89815392681528e-09 0.000406768488208835 0.00225173041785824 0.00329011202525555 0.000948930178288211 0.000273040219425895 5.29993494545663e-09 4.70233025054234e-05 XR_232013.1 LOC616903 PREDICTED: Bos taurus protein CutA homolog-like (LOC616903), 5e-46 190 81.58 0.0883248730964467 NR_038847.1 LINC00672 Homo sapiens long intergenic non-protein coding RNA 672 (LINC00672), non-coding RNA. 0.0 740 73.27 0.592893401015228 0 noncoding 0 0 0 0 -1.08605999490854 0.0257716504528106 -0.0428425701166617 0.37564111023483 AGGGGGAGGGGGAAAGGAGGGCTAAGCTGTAGAGGGAAGGGGGAGCCATTTCTCTCCACTGGCTGCAGTCTCCGTGCTCACATTTCCCCGGAATCCAGAGGCGTCCTCGGCCAAGGACTCCACAATGCTGGATATTTTCATCCTGATGTTCTTTGCCATCATAGGCCTGGTCATTCTGTCCTACATTATCTATCTGCTCTAGGGACCCGAAACGGCGGCGTGGAGCCCACAGCTCAGGGGGGAAGGATGAAGCTGACTGGCCGAGCATCCTGCTTGCTGACGCACCGCTCCTGGATTCCAGTCCAACAAGAGGCCTCTTATCGACAGTAATCCTGCTGCCCAGCAGACCTCTTCTAAAGCTTTCCGGATATGGTTAACCCCTGTCAAGCAAGGGGCTTTTTAGAGTTCAGAGGCAGAAGCACTCAGCTGGGACATCAGGAATTCACAGGCATGGCTGGCAACTGCAGCGTGCATTTAAGCTGTAGATGGAGGATGTTGAGAAAGAGCTAAAATGTAGACTCATTAAAGTTACCATGGAGAACTGCTCAAAAATTTATTTGATAGCCTTCCCTTAGGTCTTAATTGCAACTTCATATTAAGCTAAATTATGTTCTGTTCTTGCTCACATGAAGGGTGTCCCTTTTAAGTCCAAGAGCATGTTGTCTATCTTCATCTATGAAGTAGTTGCTTTATCACTCACTGTCTTTCAAGATTGCACAATCTGGGTTTGTGCGGTTTCCGTGTCTCACTCTGTAGAAGGAACTTGTCATTTGAGTTTCTAAGATTTATCTTCCCCACTCCATGCCCCTTGGGCTCCAGCTTCTCATTTAAAGAGAGCAACAGTTATACAGTCATTCTTTCTGCATACCTGAATTATAAATTATTGAAACAAAATGGCTACACGTGTTATTTGGGAAAAACTTTTCTCTTACCCTCAAATAAATGTGTTTTTTTGTTTCTTTTTTGTATTGCCAAATGTTCTCTTTCTCAAAAAACAAAAGCAAAAAACTTTTAACATTTCTCTGTCCAAGTAGGGTTGAAGAAACCATATATTTGAGGGTCCAGAGTAGAGTTGGGCCCCAAATCTGTGGTGTCTATTTCTTTGAAAAATCTGTCATGATTGTTCTACATTTGATTTTTCTTTCTGGCTTATAAATGAACAAGGAGAGAGATTAGCCTAATAGTTTTATTTATAACATTATGTTCAATTTCCACGTTTTAAAAAGAAAATCGAGGAAGTATAATATACGTCACAACATCTGGCCAAGAAAAAACACCGTTCTAGGAACTTGTCTAAGCAACAAATTATGTGATCTTCAATATGTCACTTAACCTTTGAAAGTCAAAGTCGCTCAGTGTCTGACTCTTTGCAACCCCATGGAGTATACAGCCCAGGCCAGAATACTGGAGTGGGTAGCCATTTTCTTCTGCAGGGGATCTTCCCAGCCCAGAGACTGAGCCCAGGTCTCCCAAATTGCCCGCAGATTCTTTACCAGCTGAGCCACCAGGGAAGCCCACTTAACCTTTGGGCTTCAGATTATTCTGATAAACAGCTGGACCGGAAAATCGTTTATGAGCTCTTCCATTTCAAAATTCTATAATTCTAGGATGGAAATTCCATCTTTGTTTGAGAATAGAATTCCCACAAAACAAACTCTTTTATAGTTTACCAGAAGTCTGCTTTTCTGCTCTCCCCAAATGACATTTTATAATGAAAACTCACCTGAAAAACTCTTTTTGGGTACCAACAGCCACATTATGAGGAGAAAATGAAAATATTTATTTACCCCAAACATATATCAGCGATAATTTGCCTAAGCTCTTTAAGGAATATTAACAAGTACAATATGGGGTGGTATGTAGCCAAATGAGGTAAGCTGAGAGATATACTAATGGGGGAAGCATGGCTCCAAACATTAATATGTTCAGAGATGATCTTCAGTTATCTGGAGTCCTTGATGTAACATTTC TCONS_00093765 TCONS_00093768 TCONS_00093769 TCONS_00093770 TCONS_00093771 s 3' 1940 TCONS_00093765 TCONS_00093768 TCONS_00093769 TCONS_00093770 TCONS_00093771 s 3' 1940 EMBV3_13473 CCATGTCTACCTGCAAGAGAAGGAATACAGCGACTGCGCCTGGGAAATCGTCATAGTGGA Gene GeneID:618943|LOC618943:XM_002689530:175_cdna Constitutive 0 NULL GeneID:618943 8 GENE LOC618943 NULL similar to interferon-tau EMBV3_32553 CCCAGTCTGTGCTCAGTGCTTGGAAGGATCTCAATGATCTGGTCATGGTTAGATGGGATA Gene GeneID:536449|IQUB:XM_002686913:133_cdna Constitutive 0 NULL GeneID:536449 4 GENE IQUB NULL IQ motif and ubiquitin domain containing EMBV3_31848 TCCAGGTCATTACTTAACGCTCTACAAAAGCTTTAAATCTGATTTTGAGACAGTTGAGAT Variant GeneID:510352|SPATA7:NM_001098928:100_cdna 476^945 3 EMBV3_25834 GeneID:510352 10 GENE SPATA7 MGC152639 spermatogenesis associated 7 EMBV3_08081 TTTATACAGTTCTCCTGGTTTAAGCACAGACCAGCACAGACAGCCTCGGCTCCTCAAGCA Gene BVT0102_063311 + 0 NULL GK000010.2:50712734-50869938 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017243 TCONS_00017240 TCONS_00017242 TCONS_00017241 TCONS_00017244 1 XLOC_008996 Coding TCONS_00017243 XLOC_008996 Coding Coding FAM81A 10:50868425-50931503 = TSS11823 3353 1 TCONS_00017243_1 368 0.0420518938264241 8 0.94696957686637 0.00282961006843744 0.00103276113223839 0.00195594969009814 0.00187306456543535 0.00184871899671341 0.000916580879352765 0.00122653622253573 0.00190248222444813 0.00632810822048971 0.000537179640959567 3.8404213624699e-05 0.000707487998113336 0.00071203873425427 0.00275592134912253 0.00104356563749028 0.00139472398596405 5.8829186075024e-07 4.26456715251926e-09 0.00148971090105986 0.00387125764995787 0.00070564865025516 0.00112655997608993 0.000234490235722047 0.000946845332862089 0.00181268095725728 0.000895896481906179 0.00176967622129284 2.95572003778594e-05 0.000173645039649502 0.000184821778877572 XM_618607.5 FAM81A PREDICTED: Bos taurus family with sequence similarity 81, member A (FAM81A), transcript variant X2, mRNA. 0.0 5984 99.97 0.990158067402326 XM_005254167.1 FAM81A PREDICTED: Homo sapiens family with sequence similarity 81, member A (FAM81A), transcript variant X2, mRNA. 0.0 3198 81.01 0.998807038473009 TCONS_00017243_1 sp|Q8TBF8|FA81A_HUMAN FA81A_HUMAN Protein FAM81A; 0.0 708 94.29 0.997282608695652 0 coding 1 0 0 0 -0.15022428111756 0.406231275733534 -0.0174273725987892 0.72347612620951 ACAGATGTGAATTATTAAAAAGAAAATGGCCCAACGGAGCACTGTATTTCCTTCTCTTGTCACCGAGGAAAGGTATAATATATGGAAAATATGCATCTAAGGCGAGTTCGAACGATGCCCCGACACAGCCAGTCCCTGACCATGGCACCCTACTCATCCGTAAGCCTAGTGGAGCAACTTGAAGACAGGATCCTCTGCCACGAAAAAACCACAGCCGCCCTTGTGGAGCACGCATTCCGGATCAAAGACGACATCGTCAGCAGCTTGCAGAAAATGCAGAACAAAGGGGGAGGCGACCGCTTGGCCAGGCTGTTCTTGGAGGAGCACATCAGAAACATCACTGCCATAGTGAAGCAACTGAATCGGGATATCGAGGTACTCCAGGAGCAGATCCGTGCCCGGGACAACATTAGCTACGGAACTAATTCTGCCTTAAAGACCCTGGAGATGAGGCAGCTCTCTGGCCTGGGGGATCTCCGGGGAAGAGTGGCCAGATGTGACGCCAGCATAGCCAGACTCTCTGCCGAGCACAAAACAACCTATGAGGGCCTCCAGCACTTGAACAAAGAACAGCAAGCTGCCAAACTTATCTTGGAAACAAAAATCAAAGACGCAGAGGGACAGATCTCTCAGCTTTTAAACAGAGTGGACTTGTCAATATCAGAACAAAGCACCAAACTGAAGATGTCCCACAGAGATAGTAACCACCAGCTTCAGCTTTTGGATACTAAATTTAAAGGTACAATCGAGGAACTCAGTAACCAGATTTTATCTGCGCGGAATTGGTTGCAACAGGAACAAGAACGGATAGAAAAAGAACTTTTGCAGAAAATCGATCAGCTCTCCTTGGTTGTTAAGGAAAACAGTGGAGCCAGTGAAAGGGACATGGAGAAAAAGCTCAGCCAGATGTCAGCCAGACTGGACAAAATAGAAGAGAGTCAGAAGAAGAATATGGAGGTACAGAGGACAAAACAAGAGGAGGAGAAGGTGCATGGGCGGATCAGCAAGCTTGAGTTACAGATGACCGAAGACATGAAGGAAATGAAAGCCGAAGTTGATGCAGGGTTTACCGCCATCTATGAAAGCATAGGATCCCTCAGGCAAGTTCTCGAAGCCAAGATGAAGCTGGACAAGGACCAGCTACAGAAGCAAATCCAACAGATGCAGAAGCCAGAAGCTCCCATGTGAAGGGACTCGGGACATGGACCTCAAAGGTGGTTTTGCCAGTGGGGCCAGAAGCTGGATACCTCTGTAGCCAGGCTGTCACTACATTCAGGATTGTTCTATTCATGGTGTGCATGTGCCAAGAAATGTTTTCATGGGTCTAAATGTTTACCTTGAATCTTGAAAACACTCTTCTTTAAAAGGATTACATACAATTTTTACCACTTTATTCCACTTACCTAAATTCAAGTGATAATCCTTCCTTCCCTGGATTTTAAAAGGCTTTTATCCCTTTCATTTTATGAATGAAAAGACTTAGCAGTTTCCCTTTGATTCATGATGCTCTCTAGCCAAGACTTTACTCTTGAAAATGTCATGGTGATTTTTTTAAATTAAGAAACTAATGAATCATCTTGGGAATGTGTTGCTCCTCACTAAATTTAGAGAATGTTTTAATGGATTAGAATTCAACCTTTGAGTCCATATTTGGATTTTATTATTGTTGTCTGTGCATTTCTTATATTGGTTCTCTTCTTGTAAATCTTCTGTCTTTTGTAGGGGGAGGGGATTTAACATTTGCGAAAAGAATCTACCACTTATGCAGTGAAAATAGTTTAAAAATTGATAACTGCCATATAGATTACAAATTAAAATGGAAACTTAAGACAGTTACTAGATAATACAAGGCACAATTATCTGTATCAGCCACCTAGTTATACCAGGTTTTAATACTGAAAGCTTTTTCAATTATCCTTTTTCAATTAAGCTTTTTCAATTATTCACAGCCTATATAGTGATAGCCATATATTCAATAATGGAATGGTGGTAATAGTGTATTACATAATTGATTGTTCATTAATCATATGGGATGTGAAAAACTTTCAAGCTTTTTGATCTCCTCTCTAAATTTTTCCAAAATTGGCACAGAGTGCTAAAGGTTTATATACAATTATTGTAGCTGTATTCTTGTGCCTTGGTTTTATCACATCAGTGCACTGTACCCTATAGAAGTTTTGCAGACAAAATAGAAGGCACAACAGCACATCAGAATTATGATGTAAAAACGGGATCCTATGTATTTTTTAAATGTTTTAAAAATTTTATCACTGTTATGATGTTAATCATTCAGTATCATTAATGGAATAGAAATTCATACTTTTGTATGGTCAGAAAATCAAATTGATACTGCATTTATAACAATGTCAAGAAATGTTCATTTTGAGCAATTTCGTAGATGATGGGTGTTTTTTTTCAATCGCCATATTTGATTAGTCGTTGGAAATTGGCACCAGTGGTATCTGTTCACCTGTATATGTAACAACTAACAGTGAGACACGTGCCATTCCGAACTGTGAGGGTACCCAAGAAAAAGCAAACAGGAATACTTTGAAAATTTTAAAAACTGTTTTTTTGTCTGCCAAGGACTCAGGAAAATTAAAGCATTTTCTATTTTAGAATAAATCGTGAATGAAATCTGTAACTGGCTATTACTGTTTACCCATATAAATTATGCTGCTGAAGTACATAATAGTTTACCCTCAATGGCTTGACAAAGTTTTTTCTTTTTAATTTGTACCTGAGAAGTCATACAAAGAATATGTCATCCAACATATATTTCCTTATTTTGTCACAGATCTTCCCATCTCTATTCAGGAAGACTGCTTCCACTTAACAATGAAAAAAAAAAAAAAAGTTAATGCTCTTTTGCAATTACAAAGTGAGTTTCTCTTTGTGATCAAGTAACCGTGTTTATACAGTTCTCCTGGTTTAAGCACAGACCAGCACAGACAGCCTCGGCTCCTCAAGCATCTTTCTCCTCTGGGGGCCCCGAGGAGGAGGAATCAGCACACGTCACACCTGGGAGAAGGGGAACTGGCGGGACCAAGGTCAAGGGGTGACCTGACCAGGTGATGCTTCTGTCCCCCTCTCGGGAGTTCGGCGGGGATTCTCCCCTCTGGCTGATTGAAATCACCTGGGCACTTCAAAAAGCTGTCAGTGCCTGGGCTGCTCCCCCAGACCAGCTAAGTCAGAAGCTCTGCAAGGGGATGCAGGCAGCCGCACGCGTCAGAGGCCCCCAGGTGACTCACGTGTTGTGAGTCCCTAAGCTCCACGTCCTCTTTTCACCAAAGTTTAAATGAGAATCAGCTTCCCTGTACTTTCCTTTACCAGAAATTTGCAATAAAAAGAAT EMBV3_42261 AACATGCGGGACGCACCACTAAGGCCGTTATTCAAGCCCTCGATCAAAACATCGGCAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43730 TTGTCAAACCGTTTACATCATCCTCCCAAGGGCACCTGAGCAGATCCCCAACTCCCCGTA Variant GeneID:520302|VRK3:NM_001046251:256_cdna 345^494 2 EMBV3_43722 GeneID:520302 18 GENE VRK3 MGC133825 vaccinia related kinase 3 EMBV3_12561 GGCCTGACTGCCGACCTGATGTGTTTTTACCCGCATTTCCTACTCGGGCTTGAGGATTTT Gene GeneID:510084|ANKRD10:NM_001101921:51_cdna UTR3_Alt 1 NULL GeneID:510084 12 GENE ANKRD10 MGC151663 ankyrin repeat domain 10 EMBV3_04103 TCCCGGGAGGCCCGAGCCAAGGTCATTGCGGCTGAGACGGGCCCAAACCAGCCCTCAGCC Variant GeneID:100125834|STOM:NM_001105473:2_cdna 688^890 2 EMBV3_01709 GeneID:100125834 8 GENE STOM MGC179290 stomatin EMBV3_11186 GCCAGGTGCTGAATCTGCTGAGAATGCTGATGATCCCAACAAAGATACAAGTGAAAATGC Gene GeneID:505129|MATR3:NM_001102486:208_cdna UTR3_Alt 2 NULL GeneID:505129 7 GENE MATR3 MGC140178 matrin 3 EMBV3_04768 TGGCTGTGGCACTTGCCCTTCTGGTTAAGGCACAACAGGAATGTCTGCAAAATGCAAAGC Gene GeneID:617113|SLC35D2:XM_002689830:23_cdna Constitutive 0 NULL GeneID:617113 8 GENE SLC35D2 NULL solute carrier family 35, member D2 EMBV3_39933 GGATGACAATGTTGGCTGAAGCTGAGGATGTCCAGAAATTGCTTGTTCCCAATCCAGAGG Gene BVV0102_135436 - 0 NULL GK000004.2:69753789-70049635 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41840 GAACATCACTGGTCTACAGGACACGCACAACTATTCTGATGCTCAAGGCAGGTGGTTCTG Gene GeneID:100141133|BOSTAUV1R425:XM_002695401:312_cdna Constitutive 0 NULL GeneID:100141133 18 GENE BOSTAUV1R425 NULL vomeronasal 1 receptor bosTauV1R425 EMBV3_22098 TGCACGAGGAGGAAGGAATCATGGTGGCAGTGGGCCAGGACTGCTACACGAGAATCTGGA Gene GeneID:511629|DCAF4:NM_001024520:97_cdna Constitutive 0 NULL GeneID:511629 10 GENE DCAF4 MGC138986 WDR21 WDR21A DDB1 and CUL4 associated factor 4 EMBV3_36899 TATCCAGACTCGAAACCGCAAGGCATCTGGGAAAGGGAAAAAGAAACGGGGATCCAGCCT Gene GeneID:516066|GATA1:XM_002700075:150_cdna Constitutive 0 NULL GeneID:516066 X GENE GATA1 NULL GATA binding protein 1 (globin transcription factor 1) EMBV3_06874 ACTTTGTTACCTGTCGTACTTTAAACTTTGTTTTTGAGGGAGAGAGGGAGAAGGAAATAG Gene GeneID:520631|SNAI2:NM_001034538:29_cdna Constitutive 0 NULL GeneID:520631 14 GENE SNAI2 MGC127347 snail homolog 2 (Drosophila) EMBV3_21496 AAGGAGTGGTTCCCTAGCTGCCCTGTGTGGCTAAGAACTGCCAGAACTCGTCTCAGAAGA Gene BVV0102_082368 + 1 EMBV3_08457 GK000025.2:39279505-39292718 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145586 TCONS_00145594 TCONS_00145587 TCONS_00145591 TCONS_00145592 TCONS_00145595 TCONS_00145593 TCONS_00145590 TCONS_00145585 TCONS_00145584 1 XLOC_088872 Coding TCONS_00145592 XLOC_088872 Coding Coding RNF216 25:39230551-39281563 j TSS109070 3293 3 TCONS_00145592_3 201 5 0.935543314187136 4.8437628606141e-07 0.000752279128483808 1.9393407157087e-17 5.33611637982318e-05 0.000212244094875668 3.53770698757698e-11 0.00038151906078971 0.000302758866013714 8.80563791166565e-06 6.77669883017081e-18 2.16528231699149e-06 0.000599921344708238 4.74842958835467e-06 0.000175713712164073 4.10987408866809e-06 0.001635455860676 0.000300038454311434 0.000515474166054791 0.000216816326610085 0.000668977643247569 6.40645146171826e-05 0.00122025383745702 0.00116345709794412 0.000903427508361516 0.000320020691611531 0.000432087534470114 0.000422206132447273 1.10293117083321e-28 5.55952742861091e-05 1.96696557636006e-07 XM_005225169.1 RNF216 PREDICTED: Bos taurus ring finger protein 216 (RNF216), transcript 0.0 5865 100.00 0.987245672638931 XM_005249785.1 RNF216 PREDICTED: Homo sapiens ring finger protein 216 (RNF216), 0.0 935 89.06 0.216216216216216 TCONS_00145592_2 sp|Q9NWF9|RN216_HUMAN RN216_HUMAN E3 ubiquitin-protein ligase RNF216; 3e-115 352 94.50 0.995 0 coding 0 0 0 0 -1.20222795195848 0.00354280048471082 -0.211612926562353 0.0273685939264628 TGGCAGTGACTCTGGACACACAGAGAGGACTGGCTGGTGGCGAAACCTGTAGGAAGTGTCAAGGACTCTGGAAAGAGCACAACGGCCTCACTTGTGAGGAGCTGGCTGAAAAAGATGACATCAAGTACCGAACATCTATTGAAGAAAAAATGACTGCTGCCCGCATTAGGAAATGCCACAAGTGTGGGACCAGCCTCATCAAATCTGAAGGCTGCAACCGCATGTCCTGCCGCTGCGGTGCCCAGATGTGCTACCTCTGCCGCGTGTCCATCAATGGCTACGACCACTTCTGCCAGCACCCTCGCTCCCCAGGAGCCCCCTGCCAGGAGTGTTCCCGATGCTCTCTCTGGACCGACCCCACTGAAGATGATGAGAAGCTAATTGAGGAAATCCAGAAGGAGGCCGAAGAGGAACAGAAAAGAAAGAATGGAGAGAACACCTTCAAACGCATCGGCCCCCCCTTGGAGAAGCCCCCTGAGAAAGTGCAAAGGACCGAGGCCCTGCCGAGGCCCGTGCCCCAGAACCTGCACCAGCCGCAGATACCCGCCTACGCCTTCGTGCACCCACCCTTCCCCCTGCCGCCCGTCCGGCCCGTGTTCAACAACTTCCCCCTCAACATGGGCCCCATCCCGGCACCCTACGTGCCGCCCCTGCCCAATATGCGCGTCAACTACGAATTTGCCCCCATCCACCTGCCCCTGGAACACAACCTGCCCATGCACTTTGGCCCCCAGCCTCGGCATCGCTTCTGATGCCTGGGCCCCGCCCCTCCAGGGAGCCCCGTCGAGTGCCTGGCAGTGGAGGCTGGATGTAGATGCTCCCTCCCACCCCGGCCCAGGCCCATGGCTGTGCCAGGCCTGCCCAGTAGGGGTGGTGGACTTGGCTTGCAGAAGGGTGGGCAGAGTTTCTTCCTGGGAAGGGCCACAGCTCCTTCAAGAGCGACCAGCTGGTGGTGGTACCCTGTGGGTGCCCATGAGGATTGGTCTGGCACTCCCTGGGCAGAGATCAGGGGCAGCGAAACCATCTTCCTGAAGAGTCCTGCCATTCTAGCTTCCAGGTGGGGGCCCTGGCCACAGGGCACCCATCTGTCACTCATATCCCTGTGGGAATAGATGCAGGGAAATATTTGCCTCCATCCCCAGCCCCTGGCAGACAACAGAAGTCTCTCAGTTAAAACCATGTAAGCCTTCCTCACCACAGCAGTGTGACCCATAATAAAGTGACGTAACAGCGCAGTTTGGAGAGCCACGAGATTGGACCTGGGTCCAGCAAGCCTGGTTCTCCCATCCCCTGCTCCGAGGCCTGCCCAGCGTGAGGTGTGCCCCACCGCCCTGACCAGCTGCTCCTAGTGAGGGGGTGACTGAGTGATGTTCACAAGCCTGGGAACACCACTCGGCGGGGGGAGCTGTGGACTGTGTCCCTCAGGCCCCCACTGCCACAGGGGTTCCAGGGTCTCCCCTCTTGGCCATCGGATGAGACCACAGGGAGCCACTTCATGCAATGGGATGTTTGTGTTTTATCTGAAGAAACATTTGCTGTCCACTCAGTTTTCACTTTTCCAGTTTTCCGTGGCCTACTCAAGTTTCCCTCAATCCCTATTACCTACCGAATGCCTGGCAGCTGACGGTGGGGTTCCCGGAATCTTCGCCAAACACAGGGCCTTTCTGAGCTAGCTGTGACAGCCAGGTGGCTCTGCTTGGAGCTGTGTTTGCCACCCCAGGTTCTCCCCCAAAGGTGTGGCGGCGGCGCTGGCTGTCCCCAGGGCCAGGGGACCTGTCCTGAAGTCAGGACTCGTTTGGGAGCCCCTGCCATGCCGCGCGTGGACTTTGGCTGTCCAGCCCCAGCCAGGTGTCAGCTGCGCCCCAGCACACGCTTTGCAGCATGTCACCACACTCCATCCCGCCTGCAGAGCCGTACCCCCCTGGGGATGAACCTGCCTGGCCCCAGTGTTAGCCTCCGTTCTCTGGGTGACACTCCGATGGCTGTGGGCTCCCAGAGCTCACACACACAGACCTCAGTGCAGTGGACATGCTCCATGTCTGGGCACCCTCTGCCACCAGCCTCAGCTGTTTTTCAGAGATTAAGCTGGAGAGATGAGGCTGAGTTGTGCGTCCTTGCTCTTTTCTCCGGATCTGGGCTTGAGGGGTGCGGGTGCTTGAGGAGAGGCCACACCAGCTATCTGCTGCCAGGGGGCCCTCCCTGCCCAACCCTGCCCCTGCCCCCCGCCCCTCAGGTGCAGCTGCAGGGTTTCTCCCTGTGCCTGGAAGACACGTTCCGCCCCCCTGCTCCCCACAGGAGGGCTCTGAGAGCCAGGAGCTGCCAACAGGTGTCCCCAGGTGCTGTCTGCCTGCTCAGCTGGTGACAGTCTCAGCCCAGCCCAGCAGAACCTGCTAGGTCTCTGACCCAATTCACCATCCAGCGAGGGAGCCAGCCTCCACCATGGCCCTGTGGCCCGGGGTTCATGGCTCCACGGAGGGCCTGGGGCAGCGGCAAGGACAGAGACCTCAGGCAGGTGTGTGCCCAGCGCCGGCCCGGTGACTGCCCTAGGCCCTGCGCGTAGAGGCACCCGGCACAGGGAGACCAGAGTGATGGTCCCCTCAAGGCCAATCCCAAGGCTCGTCTTCTGAGATGAGTTCTGGCAGTTCTTAGCCACACAGGGCAGCTAGGGAACCACTCCTTCCTCTCTGAGCCCAGGGCACCCAATTTCCAGTGTTCCTCTTCCAGCCAGCGTGTGGAGTGGCTGGCAGGCCAGCGGCCACAGCGCCGTCACCAAGCGTAAGTCCCCGCGTGTCTGTGAAATGAGCCTGTGTGTCCACATGTCCTGGAGACAGCACCTGGGTCTCGGTCTCCTGGAGAAGTGGTCTGTCCTAGTGATGGGGTGGGGGGAGAGACGGGACATCCTCATCTGACAAGACAGTCAGTGGCCTCAAGACACTAACGCCGGGACACCCGCAGAGATGAGCCCCTGTCTGGGGACAGCAGTCCTGGAGGCAGCCAGCACCTTCCCCTCTGGGCTGCTGGGCTTGCTCCCCGGAGCGAAAGACTGCCCAGTGGCAGTCCTGTTCTTGCCTTAAAACTGGAGAGAGGAATCTAGTATTTGCACTTAGCAAAAAGTTTTAAAACAAGTGTGCATGACCAGTCACATTGTATAAAAACAGCAAAAATGATTAGTTTATTACATTTTTTTTTCTTTCTGGTAGTAAAAATACATAATTGTTTAAACTACTGTGTGTAAAAAGCTTGTATTATATGTAACTTGTTTTTTTTTGTAAATAGATGTTTGTGCAGACTGC EMBV3_01778 GTGTGTGGTGCTTGGTTTCAGTGTCGGTTTGGAGGCGTTTGATGAGCTCCTGCCAATTAA Gene BVT0101_002879 - 1 EMBV3_35066 GK000028.2:18572814-19004886 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00253025 TCONS_00063037 TCONS_00152753 TCONS_00222010 TCONS_00007432 TCONS_00251705 TCONS_00177841 TCONS_00186108 TCONS_00232348 TCONS_00248863 TCONS_00109859 TCONS_00023615 TCONS_00252354 TCONS_00010052 TCONS_00218899 TCONS_00251930 TCONS_00175545 TCONS_00040583 TCONS_00011804 TCONS_00073576 TCONS_00021596 TCONS_00040195 TCONS_00123618 TCONS_00234064 TCONS_00207068 TCONS_00020651 TCONS_00072815 TCONS_00177280 TCONS_00206861 TCONS_00040147 TCONS_00148279 TCONS_00231613 TCONS_00062743 TCONS_00078479 TCONS_00245928 TCONS_00153219 TCONS_00252056 TCONS_00124845 TCONS_00176254 TCONS_00056728 TCONS_00006827 TCONS_00047865 TCONS_00157440 TCONS_00006026 TCONS_00022065 TCONS_00136896 TCONS_00142489 TCONS_00219970 TCONS_00197184 TCONS_00238326 TCONS_00038667 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00071185 TCONS_00066285 TCONS_00156732 TCONS_00040745 TCONS_00040178 TCONS_00201770 TCONS_00244653 TCONS_00222115 TCONS_00056147 TCONS_00221977 TCONS_00190322 TCONS_00239418 TCONS_00116101 TCONS_00250938 TCONS_00251546 TCONS_00010780 TCONS_00123170 TCONS_00176255 TCONS_00249570 TCONS_00040698 TCONS_00209529 75 XLOC_131641 XLOC_155966 XLOC_037764 XLOC_092518 XLOC_135319 XLOC_002993 XLOC_154646 XLOC_107614 XLOC_112161 XLOC_141833 XLOC_151806 XLOC_065763 XLOC_014282 XLOC_155295 XLOC_005604 XLOC_132218 XLOC_154871 XLOC_105326 XLOC_024399 XLOC_007354 XLOC_045340 XLOC_012269 XLOC_024012 XLOC_075170 XLOC_143543 XLOC_125587 XLOC_011326 XLOC_044583 XLOC_107054 XLOC_125381 XLOC_023964 XLOC_090161 XLOC_141101 XLOC_037470 XLOC_047367 XLOC_150855 XLOC_092984 XLOC_154997 XLOC_076388 XLOC_106033 XLOC_034531 XLOC_002389 XLOC_027997 XLOC_095895 XLOC_001589 XLOC_012736 XLOC_083107 XLOC_086914 XLOC_133287 XLOC_118846 XLOC_144993 XLOC_022490 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_042957 XLOC_040999 XLOC_095192 XLOC_024559 XLOC_023995 XLOC_123415 XLOC_150512 XLOC_135424 XLOC_033950 XLOC_135286 XLOC_116357 XLOC_146084 XLOC_070270 XLOC_153881 XLOC_154487 XLOC_006331 XLOC_074724 XLOC_152513 XLOC_024514 XLOC_128040 Coding TCONS_00251705 XLOC_154646 NonCoding NonCoding - X:69426447-69426965 - TSS188926 518 1 TCONS_00251705_1 65 0.998069498069498 1 0 7.09796182982944e-05 8.25130051264552e-05 8.36387637595908e-05 6.12483022995686e-05 4.85412696465069e-05 2.9145615925694e-05 6.69054052826153e-05 0.000135565964623714 7.63572753659092e-05 0.000199472884297573 0.000288436218688991 0.000126478971862607 3.58154756486511e-05 0.000167873968938793 6.06447753711831e-05 0.00422691868074486 0.00135280383723707 0.00369220715623738 6.94866064937201e-05 0.000100603125611537 3.7212167832166e-05 0.00131422003808896 0.00236628688467835 0.00191902574808165 7.05510863807836e-05 0.000171203243300918 0.000106584388318346 0.00043618489023452 0.000336938112620144 0.000591491882455087 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 3e-42 176 69.22 0.938223938223938 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 0.0334088256294549 0.634235315248572 ATCTCTTCCTCTTTTGTTTGGTTTGGTGGGCATTTATCCTGTTCCTTTATCTGCTGAGTATTCCTCTGTCTCTTCATCTTGTTTAAATTGCTGAGTTTGGGGTGTCCTTTATGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCATTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCGGTGTTCTGGTATGTGGAGCTATATTTCTTCTCTCTGGAGTGCAATGAAATGTCAGTAATGGGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTATTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATGAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTC TCONS_00244679 . 5' 70432 TCONS_00244679 . 5' 70432 EMBV3_31964 CAAGCACTTTACTTCCTGTCCCTCCCCAGCCTTAACCCTGATGCCCACCCACACCCCAAA Gene GeneID:513078|CC2D1A:NM_001098954:22_cdna Constitutive 0 NULL GeneID:513078 7 GENE CC2D1A MGC151642 coiled-coil and C2 domain containing 1A EMBV3_23859 ACGAAGTTTTCACCATCATCTCCCTCCCCATTCCATCCGAATACGAGTGCTCTCTTCAGG Gene GeneID:506271|USP50:NM_001080230:38_cdna Constitutive 1 NULL GeneID:506271 10 GENE USP50 MGC128007 ubiquitin specific peptidase 50 EMBV3_25108 CAGGGGAAACGGGAAGAAGCGAAAGCTCCGTTTCATGGAGGCTGAGGCAAGAGAAAATTT Gene BVT0102_208842 + 0 NULL GK000003.2:13784729-13940412 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168470 TCONS_00168476 TCONS_00168467 TCONS_00168473 TCONS_00168468 TCONS_00168471 TCONS_00168472 TCONS_00168469 TCONS_00168475 TCONS_00168477 TCONS_00168474 1 XLOC_103118 Coding TCONS_00168468 XLOC_103118 Coding Coding - 3:13817624-13892063 - TSS126343 1765 1 TCONS_00168468_3 90 5 0.976356162175233 0.000832394161290585 0.000586394149911455 4.17058025702216e-15 0.000228471954471292 3.06302791547984e-88 6.02235398686065e-05 1.55869385031815e-47 0.000622060284445632 7.83929953743586e-05 4.19314762558994e-13 1.09737339808272e-05 1.67489084624876e-172 1.50886183678489e-05 8.60222527034031e-05 0.000235085437006105 0.000862664379636558 0.00195890950223757 2.881512514997e-13 0.000808405331584577 0.000495773140789919 0.000421089246028266 2.29547671784136e-26 3.97155786269359e-99 6.00422809869772e-05 0.000637748499776484 0.00196400535431025 0.000698656594402352 5.63595235931525e-05 0.000388415158477185 0.00035650151011735 XM_005197720.1 LOC511220 PREDICTED: Bos taurus rho guanine nucleotide exchange factor 11-like (LOC511220), transcript variant X2, mRNA. 0.0 1871 100.00 0.586968838526912 XM_005245629.1 ARHGEF11 PREDICTED: Homo sapiens Rho guanine nucleotide exchange factor (GEF) 11 (ARHGEF11), transcript variant X1, mRNA. 0.0 1777 84.39 0.920113314447592 TCONS_00168468_3 sp|O15085|ARHGB_HUMAN ARHGB_HUMAN Rho guanine nucleotide exchange factor 11; 3e-47 164 95.60 0.988888888888889 1 noncoding 0 0 0 0 0.489571854592665 0.0770906272999417 0.0437514706593063 0.427988794114523 GGGGAGAGAGGGCAGCTCGGGGAGGGGGCGGCCGGCGGGGCCTGCGCCCGAGCGAGCGGCGAGCCGCGGGGGGAAGGGGCCCGGAAGGAGGCGAGCGCGGCCGCGACGCCGGGAGCCGGACGCCCGCCGGTGCCGGCCTGCCGCCGCCGCCTTTCCTGCCTGCGCCCGAGCGCGGAGTCTCGCGGCTGCCGAGGCCGGAGTGCGGCGGTCGGGCGTGGGGCGAGCGGGCAAGCGGGGCCGGGAGCCGGAGGCCGCCGGCGGTACTGCGCCAGGCGCGGTGGGCTCTTGTCTGCGAGGTTAGGCGAGGGGCAGAAAGGGAGGAAAAAGAGAGGCCGAGCGAGAGAAGCCAGGCGATCGGATTGTCCAGGAGGCTGGTGTGGAGGAATATCCCACCCCGAACTCAAATCCACAATAATAATCCAAACTATTAATAATAAGGGGCAGTTTTCCTGGCCAGGCGAGAGGGAGAGCAGGGGAAACGGGAAGAAGCGAAAGCTCCGTTTCATGGAGGCTGAGGCAAGAGAAAATTTCGGAGCCTGGATGTGGAGGAGCAAAACAGAACTAACTCAGGAAATTGTCTTTGAGAAAAAGGCCGAACCTAGGCTGGGAATCAGGCTGGGGTAGGTGGAGAAACCTGCAAGTTTAAAGGAAAAAAAGAAGAGAATATTTTCAGAGATTTTTCTCTGGTTTGTGGTATTGCTACCATTTTAAAGGTAAAAAGCATTGCATTCAGGTGTTTTTTTTTTTTTTTTTTGGTGCGATTGGCTCATTTAAAAATTTCAGAACCTTTTCATCTAAAAGCTTTTTTTTTCCAAGGAAATTATAATTTCGATTTCCCAGGGTTGCACTGGACTTGTAAGGAGTGCTGTTGTGTACATACTATTGTATGGTTTTATTTATTTTTTTACTGTGCAAATCAGCTGGAAGATTTTTTTCCAGGTGTCAGTTTGGATTTTTTCATCTTTTTTTTTTTTTTTGGTCCCTCAGTATATCTGTTGTTGTCGTTTTAAGCATTGGAGACCAGAGAATTATTTTTTTCCCCTTTGGAGCTTGAGGCTCTTGCCAACGTAAGGACAGCTGGGAAAACTGGATTAAAAGGATGTTTTTAATCTATATTTTGCAGTTAAGATTGATATTTTGAAGGCACATTCTTTCTGTGATTTTTTTTTTTAAGCCCACAGCGCTAACCTTGAAGAGATTTGTGGTTGGGTTTTTGGTTTCTAAGAAGGTCATAGTTTTTCTCTTTTTCTTTCGTTTTTTTTTTTTTTTTTTTAAAGAGGGGGGAGGGGAAAGGGGGGCTAAGAAAGGAGACCATGTTAACTGGTAGAAGTAGAATGGAGCTTCAGTCACCCGGGTCCTGAGAGCTGGAGGAAAAAGGATTGTCTTCAAGTTGGGAGGCCCTCCTCTCACCTCTTTAAAAATTGTGAGCGATTCAGTCCTGATCAAGACATCACAACTACAGGATTCTGAAACCGTGGAGACACCGAGAAACCATGAGTGTAAGGTTACCCCAGAGTATAGACAGGTTAAGTAGCCTGTCTTTGGGAGATTCAGCACCTGAACGCAAGTCCCCTTCTCACCACCGCCAGCCCTCTGACACATCTGAGACAACAGGTCTGGTTCAGCGCTGCGTCATCATCCAGAGGGACCAGCATGGCTTCGGCTTCACAGTCAGCGGGGACCGCATCGTCCTGGTGCAGTCTGTGCGGCCTGGAGGTGCAGCCATGAAAGCCGGTGTGAAAGAAGGTGACCGGATCATCAAAGG TCONS_00168471 TCONS_00168471 TCONS_00168471 TCONS_00168471 TCONS_00168471 s 5' 0 TCONS_00168471 TCONS_00168471 TCONS_00168471 TCONS_00168471 TCONS_00168471 s 5' 0 EMBV3_39630 AGCTGGTTTTCTCTCTGCGCCTGATGGAGGACCTCCCCTTACCACACCATCGTGGACTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20972 ACGACATAGTGTTAGTACAACGGAATAAAGTACTTGAATTTGCGACATTACCCACTCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04718 GGTGGCTCAGTAGTAAAGGATCTATGTGCCAACACAAGAGACACAGGTTCACTCCCTGGT Gene BVT0102_007312 + 0 NULL GK000029.2:46573467-46632381 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31974 CATGAGGGGATGGAGACTCAGCTGAAGAAGATTTTGGTTCTTCAAAATTGCTGCCATTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11118 GCTGCAGTCTTTGTAGCCAGAAGGGGTTCATCTGTGAAATCTGTAACAATGGAGAGATCC Gene GeneID:533312|PLEKHM3:XM_002685541:133_cdna Constitutive 0 NULL GeneID:533312 2 GENE PLEKHM3 FLJ41210 PLEKHM1L pleckstrin homology domain containing, family M, member 3 EMBV3_10724 CCCACCAAACAGATGTCTCAACTTCACATACAGGATATCGCTCCCCCCGATCCTTTGCCT Gene BVT0101_072566 - 1 EMBV3_11016 GK000006.2:93942981-93988623 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015596 TCONS_00205858 TCONS_00205857 TCONS_00087348 TCONS_00015595 TCONS_00138547 5 XLOC_008522 XLOC_124763 XLOC_052450 XLOC_008521 XLOC_084672 Coding TCONS_00087348 XLOC_052450 Coding Coding LOC100848332 18:60218926-60221065 = TSS64873 2139 1 TCONS_00087348_2 712 0.992052360916316 1 0 0.000442073086968519 0.000615402990760653 0.000412082932001165 0.000315433925469834 0.00024062662096488 8.36147847119853e-05 0.000239239590160616 0.000742680503946347 0.000371944202106013 0.000419336108733386 0.000152594625256306 0.000181793160875554 0.000181761343084779 9.78627575134143e-05 0.000242413888972188 0.00346042658466713 0.000731539958893054 0.00133333439912686 0.000189414485522251 0.000200322388143693 8.77556298415555e-05 0.000663141532762923 0.00122878184105077 0.00209917063168988 0.00027316631561846 0.000205862474847734 0.000268898616114899 0.000255958935358457 0.000204261107924886 0.000340103285497872 NM_001281902.1 LOC100848171 Bos taurus envelope glycoprotein gp70-like (LOC100848171), mRNA. 0.0 3844 99.86 0.999532491818607 TCONS_00087348_2 sp|P61565|ENK1_HUMAN ENK1_HUMAN HERV-K_12q14.1 provirus ancestral Env polyprotein; 2e-25 113 25.68 0.471910112359551 1 noncoding 0 0 0 0 -0.0416631463105371 0.722169133193009 -0.00435113151237564 0.962035436942678 ATGTCTCAGCCTCTCGGATACCGAGTTCCACGGCCGCCGCGACCCCGAAAGAGGAAAGGGCCTCCTCTGCCTTCGCTCCCCCCGCCAGCACGGGAAACACCACTGACATCGGAGCAACTGACATCGGGGATCCCGGATGAGCAGGGGACGGATCCGCCCACCAAACAGATGTCTCAACTTCACATACAGGATATCGCTCCCCCCGATCCTTTGCCTCACAAAAGGAGGTCAGGCCGCCTGACTCAGGCGACCCGGAATGCCTCCATACCTACTTGGGGACAAATAAAAACACTCTGCCATCAGGCACGGGGAATAACCTCTTTGCAGGGCTCTCCAACCTCCCCTGAGAAGATGTTTATTGCTATGCTTGCCTTATTATCATGCCAGGTAAGCGCCTCCTCCCCCACTCCTGAAAAGTATTGGGCTTACTTCCCAGACCCTCCAACCTTTCAAGTAGTTACCTGGAACAGTGACCCCCTACGGGTCCACACAAACCAGCCTCAGTTACTGGGAGGGTCATATACTTCCTATACCACAGACGAATATCCTATTAATTTCAATTTTACCTTCAGGGGATTAGCAGACGACCTTCCTGTTTGTTTCAACTTCCCCAGTGATATAGAAAGCTTTATTATTCCCCCTAAAGAAGGATGTGTCGGAGCCTCTAAAAAGGCAGTTCTGACTCATTCTCCAGCCTCAGGTATTGAACATAGAGGGCGTCTAGCGCTTTGGATTTTACAGGCTCGTATGCCCGGGGCCCTTGATCCCCACGAACTTATAATCCATAGACCCCCTCCTGGATATCCAAGTTGTTATAATACCGAGCCTTCAGATGCCATATGGAACACTATAGATGATCGTACAGGGTATCCGATTTGGAAATCTTGTACTTATCGTTTAAGAGCTGATTACAGAATACCGGGAGGAGGAAATTACATGATTCAAGATTGGAGTAACTCAGACCTAGATAGGAGCCCATTGCCCCTTGATGACTTTCCCAGCAGATTTTATAATTGGAAGAAAGATTTGGTTTCTTGGCCTTTAAGCATTACTAGATGGCATAATAATCGATTTGTTTCGCCTATATTGTCTTATACAACTAAGAACAGAACCTCTTGGCAGCCAGAAATTTGGAGGGCCCTTGCTGCCACCGCTCCCATTTCCTTATTCCGTCCAAATAGCAATTCTACTTATTCTGTTTTAGCTTGTGTACCCTCGCCTTATGTTTTTCTCTTTACTAATGACTCCAAAAGATTAAATGTACACATGAATTATTCAGGTGGACCTAATATTGTAACTTGTGAACAATGTATGCTTTCATCTTGTTTGACCCCGCAATATAATGTTTGTTCTTTTGTTGTGTTGAAACGCCCACCCTATCTCATGATACCTGTGTCTGTGCATTCTTATTGGTATGATAATTACGGTTTGGCTGTATTACAACAACTGCAGGATTTAATGCGAACACGACGGTTTGTGGGCTTACTTATCTTGGGAATAGCAGCTTTGATAAGTGCAATTACTTCTGTTACTGTGGCAGCAATATCATTGACTCAACAAGTACATACTGCTCAATATGTTGATTCTATGTCCAAAAATGTTTCTTTAGCATTGGCAACACAGGAAGCTATAGACAGAAAATTAGAGATGAGGGTAGACGCCCTAGAGGAAGCAGTAATACATATTGGGACTGAATTGCAGGCTTTAAAGGTGAAAATGGCATTGTCCTGTCATGCTGACTACCGGTGGATATGTGTAACACCCCTGAAAGTAAATGAGACAGATTTTGAATGGGAAAAGATTAAAAACCATATTTCAGGTATTTGGAACAGCTCTGACATTAGCTTAGACTTAGGGAAACTTCACAATCAAATAGCAACCCTGGAACACTCCCGATTAGATTTTACTGCCGCTGGAACAGCAAATGATTTCTTCCATACTTTCTCTAACTACATTTCAGGAAAAAATATTCTGTCTACCTTCCTCGGCTACGCTACCTTGGCTGTTTTAATTTTATTTCTAATAATCATTCTTCCTTGTATTGTCAGGATTCTTCGGCAGAGCATTCAGAGGCTCGCGACTGAGCTACATCTGGCTGTTTTAAGAAATAAAAAAGGGGGAGATGCGGGGAGCCGGTGA EMBV3_36795 TCCTTACACAGATCTCCTTCTGCACCCCCAACCAGATCAACCACTTCTTCTGTGACGCTG Gene GeneID:523768|LOC523768:XM_002697400:76_cdna Constitutive 0 NULL GeneID:523768 23 GENE LOC523768 NULL similar to olfactory receptor 303 EMBV3_00188 AGACGAACAGCCGGTACTATATCTGGTTGTGGCTGATGTAGTTGTACACCAGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_25329 TCCATCACTTGGTTGGCGGTTACAAGGATATCTCATCCATGGTAGCAAGATGGAAAGCAG Gene BVV0102_128672 + 1 EMBV3_20996 GK000017.2:38327235-39208175 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05413 CACGGCGCTCAAGGTCGTCAACCTCGGTATTCCAACTTTATTATATGGACTTGGCTCCTG Gene GeneID:535251|LOC535251:XM_002690478:403_cdna Constitutive 0 NULL GeneID:535251 10 GENE LOC535251 NULL similar to mCG9285 EMBV3_11367 TTGCCAAGATGAAGGAATTCAAGAGCAAGCTGGGCAAAGAGAAGAACAGCCGTCTGGTGG Gene GeneID:614106|TMED8:XM_002691100:245_cdna Constitutive 0 NULL GeneID:614106 10 GENE TMED8 NULL transmembrane emp24 protein transport domain containing 8 EMBV3_43002 TGTATACTTAACTGCCAAGAACGCTGGACAAAGAGGAACTGAAGTTTTCAGCATATCTTC Gene GeneID:404168|HNF4G:NM_205811:7_cdna UTR3_Alt 2 NULL GeneID:404168 14 GENE HNF4G NULL hepatocyte nuclear factor 4, gamma EMBV3_28995 ACTCTCACAGGGAGAATGAATTGTGTGCTGGCCACGTACGGAAGTATTGCTTTGATAGTC Gene GeneID:100296722|LOC100296722:XM_002696150:75_cdna Constitutive 0 NULL GeneID:100296722 19 GENE LOC100296722 NULL similar to upregulated during skeletal muscle growth 5 EMBV3_42239 AAGTCTACTGGGTGCCTTTACAAGCCAGAGGCTGATGCTGCACTGTTGATGTCATGTGAG Gene BVV0102_231943 + 0 NULL GK000015.2:29516721-29522010 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058703 TCONS_00058704 TCONS_00058705 TCONS_00058706 TCONS_00058709 TCONS_00058708 TCONS_00058702 TCONS_00058701 TCONS_00058710 1 XLOC_036171 Coding TCONS_00058703 XLOC_036171 Coding Coding UBE4A 15:29476681-29519968 j TSS44165 6409 2 TCONS_00058703_7 539 0.019815883913247 19 0.852377212031604 0.00055345280155527 2.99638328699225e-14 0.000181064216036572 0.00100687005656965 5.67024116635609e-06 0.000353811739692594 0.000687901619174775 4.54073482453725e-06 0.000374006107796486 0.000979900088439371 0.000625128681155286 0.000158552531449371 4.4577687436298e-05 5.14091514715669e-06 4.58793543331303e-08 0.000294980621978799 3.5690702327021e-23 4.94950613418348e-05 6.88912818900244e-07 0.000481941388272055 5.7797090434051e-05 4.05828987356275e-14 0.00108498932883394 0.00263831236945811 0.00139357935403902 0.00111630196809999 0.000713815330919772 0.000696110796424096 0.00040593989072422 1.59009389240413e-09 XM_005215840.1 UBE4A PREDICTED: Bos taurus ubiquitination factor E4A (UBE4A), transcript 0.0 8341 100.00 0.721485411140584 XM_005271733.1 UBE4A PREDICTED: Homo sapiens ubiquitination factor E4A (UBE4A), 0.0 3184 89.47 0.372288968637853 TCONS_00058703_7 sp|A5PKG6|UBE4A_BOVIN UBE4A_BOVIN Ubiquitin conjugation factor E4 A; 0.0 1119 100.00 0.998144712430427 2 coding 1 1 1 1 1.03648585827467 0.00932722737118039 0.0611392345301327 0.38488360927756 GAATGTTTGCGCGCCCGCTCCCAGCACAGGGCGACACACCCAGCTTCCGGCGCCCGGATGAAATTGCACAAGGCTTGGCGCCTAATCATGACGTCAGCTCCGGTTGCCTTGCTGAATCGGAAGTGGGAGCTCTTCGGCCGCTGAGACTCTGTCGTGTCGTCGCTGCTGGCCTTTCAGGCTCTGCCCCTCCCCCTAGGTCTGGATGGAGGATACTTTAAAGTGAAATGACAGACCAGGAGAATAACAACAACATCTCAAGTAACCCCTTTGCTGCTCTTTTTGGCTCCTTGGCTGATGCCAAACAGTTTGCAGCAATCCAAAAAGAGCAGCTGAAGCAGCAGTCTGATGAACTCCCAGCCAGCCCAGATGACTCGGATAATAGTGTGTCAGAGAGCCTGGATGAATTTGATTACTCTGTGGCTGAGATCAGCCGCTCATTCCGTTCACAGCAGGAAATATGTGAGCAACTCAACATCAATCACATGATCCAAAGGATCTTCCTCATCACTCTGGACAACAGTGACCCAAGCCTGAAAAGTGGGAATGGCATCCCCAGCCGGTGTGTGTATTTGGAAGAAATGGCAGTAGACCTGGAAGATCAAGACTGGCTTGATATGAACAACGTAGAGCAGGCTGTCTTCACTCGCTTATTACTTCAAGATCCAGGCAACCACTTGATTAACATGACTTCTTCTACAACATTGAATCTCTCTGCTGATCGAGATGCAGGGGAGAAGCACATTTTTTGTTACCTTTATTCCTGCTTTCAAAGAGCCAAGGAAGAGATTACCAAAGTTCCAGAGAACCTGCTACCCTTTGCAGTACAGTGCAGGAACCTCACTGTGTCCAATACCCGAACAGTCCTCCTCACCCCAGAGATCTATGTTGACCAAAACATCCACGAGCAGCTGGTAGATTTGATGGTGGAAGCCATCCTAGGAGGCCATTTTGAAAGTGTAGCTGAGTTTCTGGATGAGGTCATCGAAGCTTTGATACTAGATGAGGAAGTTCGAACATTTCCAGAAGTCATGATTCCAGTGTTTGACATTTTATCGAGCCGAATCAAAGATCTAGAACTCTGCCAGATTCTACTGTACGCGTATCTGGACATTCTTCTCTATTTCACTAAGCAGAAGGATATGGCCAAGGTTTTTGTAGACTACATTCAGCCCAAGGATCCAAGTAATGGACAGATGTACCAGAAGACCTTGCTAGGAGTAATCTTGAATATCTCCTGCTTATTAAAGACACCGGGAGTCATAGAAAATCATGGCTACTTCCTGAACCCATCTCGTTCCAGTCCCCAGGAGATCAAAGTACAAGAGGCCAACATTCATCAGGTTTGGACAAAGAGACCTGTTTGATTCCAGCTGTACAGGAGCCAAAGTTTCCCCAGAACTACAACCTTGTAACAGAGAACCTTGTCCTGACAGAGTACACCTTGTACTTGGGATTTCACAGGTTGCATGATCAGATGGTAAAAATCAACCAGAATCTGCATCGGCTGCAGGTAGCCTGGCGGGACGCTCAGCAAAGTTCCAGCCCTGCTGCTGACAACCTCCGGGAGCAGTTTGAACGACTGATGACCGTCTATCTTTCTACCAAGACGGCCATGACTGAGCCACAGATGCTACAAAACTGCCTAAACTTGCAGGTGTCCATGGCTGTTCTCCTGGTTCAGCTGGCCATAGGCAACGAGGGCTCACAGCTGATGGAGCTGACTTTTCCTTTGCCAGATGGCTACAGTTCTTTGGCTTACGTGCCAGAATTTTTTGCAGATAACTTGGGTGATTTCCTCATTTTTCTCCGTCGCTTTGCCGATGACATCTTGGAGACATCGGCAGATTCCTTGGAACATGTCCTTCATTTTATCACCATTTTCACTGGAAGCATAGAAAGGATGAAGAATCCCCACCTAAGGGCCAAACTGGCTGAGGTGTTGGAAGCAGTGATGCCCCACATGGATCAGACCCCAAATCCTTTAGTATCCAGTGTCTTCCACCGGAAACGTGTGTTCTGCAACTTTCCCTATGCATCCCACCTTGCAGAAGCTCTCATCAAGGTCTTTGTGGACATTGAGTTTACAGGAGACCCCCATCAGTTTGAGCAGAAGTTTAATTACCGCCGCCCCATGTATCCCATCCTCAAGTACATGTGGGGAACAGATACCTATCGAGAGAGCATTAAGGATTTGGCTGACTATGCCTCTAAGAATTTAGAAGCCATGAATCCCCCGCTCTTCCTCCGCTTTCTTAACCTGCTAATGAATGATGCCATCTTCCTTCTGGATGAAGCCATACAGTATTTGAGCAAGATAAAGATTCAGCAAATTGAGAAGGACCGAGGTGAATGGGACAATCTGACTCCAGAAGCCCGCCGAGAGAAGGAGGCAGGCCTACAGATGTTTGGACAGTTAGCACGTTTCCATAACATCATGTCCAATGAAACAATCGGTACCCTTGCGTTTCTGACATCAGAGATCAAGTCCCTCTTTGTGCATCCTTTCCTGGCCGAGCGCATCATCTCCATGCTGAACTACTTCCTGCAGCACCTGGTTGGCCCCAAGATGGGGGCCTTAAAAGTCAAGGATTTCAGTGAATTTGACTTCAAACCCCAGCAGCTCGTTTCAGATATCTGCACCATCTACTTAAATCTTGGGGATGAGGAGAATTTCTGTGCCACTGTGCCCAAGGATGGCCGTTCCTATTCCCCAACTCTCTTTGCACAGACAGTCCGAGTCCTGAAGAAAATAAATAAGCCTGGGAATATGATTGTGGCTTTCAGCAACTTAGCAGAGAGAATCAAGTCCCTAGCAGACCTCCAACAGCAGGAAGAGGAGACCTATGCTGATGCCTGCGATGAGTTCCTGGACCCCATCATGAGCACACTGATGTCTGACCCTGTGGTGCTGCCGTCCTCCAGAGTGACTGTGGACAGATCCACCATTGCCAGACATTTGCTCAGTGACCAAACAGATCCCTTTAACCGTAGTCCCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAAAGAAAAAATCCAACGGTGGCTCGCAGAGAGGAAACAACAACAGAAGGAGCAACTTGAATAAATACTATGACCTAAGCAAACCAAAAACCAACCCCAGAGTGTAGATAAACAGTTGTGGTTTCTCTCTCTCTGGTTCTCTTCCTTTCCTTTTTCTTGACTTTTATTTTTTACTTTTTTTCCCCTTTACTGAATTAGAGAACTGCTCTTGCTCAAATTATGATAATTAAAATTCCTAAGAACTTTACAATGCACCTAGCTTACAGGAAATTATACTTCTTATAGCATCACCACATTTAGAAATCACTAATTTTTACCTTTTGTTATCTCTTCCTGTTCCTTCTCCCTTTTCCTTCCTTAAATTATATTAACTTCAGCTATTAAAACCTCCCGCCTCCTTACTATTTCTTCTCCAAGAACTGCTCAAACATCTTTGGTGAGCACTGCTTTTAAGTATATGATATCACATATTTCAGTGACAGCTGGTATCAGAAAGTCCTGTGTTATCAAGGTACTTACTAGTCTTCATGACCCAGACTTCAGCCCCTTTCCTTGTTACAGCTCTACACTGTTACAGAATAACTTTTTATATAAAAGCAGATACCTTGATGTTTGAGTAGATTTTTTTAATAAGATGACAGATGAGATGAAAATAGGAATCTTATGCAACTTCAGTGGGTAGCTCTCAGTTTTGTGTTCTCTTCTAACTCAGAAATGCCTTGGAGGGCAAACACTCCTCCGTGGAGTTGTCATTACACAGGAAACTTAGCCCTATGATATTTTTAGGAGGATTGGTAGAACAAATTGGCAGTTTTGACACTTTATTCAGAAAACTCCAAGGTGAAAAAAGAAGGCTGTTGGGGCCCTTTTTATTTACTGGAAATCAAGGACCAGGCTTGTGTAGAAAAGTTAGGCAACAAATATTGTAACCAATGAGACATGTCATTTCAAGACACTAATATCAGCAGTGTATCTGTGTGTATATATATATACACACACACACCATGTACTTTTTTATATTGGCCTAGTGTAATACAGAGAACCACTTTATATTGTCTCTTCCGTGGTAAGATGTATGCAGTATGTGGCCGTGTTTACTAACATTTACTCTAGACAGAATTCTGAGACTGTAAAATGTATATAGTTCATGTTCGTTTGGACTTATGACCTGATAAGAGCTGCTTCTAACTCAGCCTTAGGTCATCAATTAACAGAATAGGAATTTGAGCACAACCGTGTCCACAAGCCATTTTAAATATCCACTTAGCCCTAAATAGTTATTTAGCAGGTGGATGGGCCCCTCACTTTACAAGTTGAGCTTGAGCTCCCTACTAAATCGTGCAGCTTAACATGCCGAGTAAGTCTCATTCCCCTATGGACTGTCTATACCAGTATCCCTCTAAACCCGAAAATACAACTGACAAGAGTGATATGATCTAGAAGTAGAGGTCATTGCTTCACTTCAAGGACATTATTGTTAACCATAGCCTCTTTCAAATAAGACGGTAGTTTTATGGTAATCCAATACAAGTTGTTATAAGCAGTCCTTGATGTGTTTTTGATGGTTCCAGCAGGAAACTCTGAAGTTAGAGGGCATCCCACACTAGATAAAAAATAGATGTTGCCTGTCAATTGTGCTTATAACTGAAAAAGGCAGTCCAGGACTCTCACAAATACTAGAACGTATGCTACTAAATCAATGTGTTCCCTGGGCCTCTAAGGCACAGGTTGACAGGATTTGTTTATTTTCTGAAAATGAGCTTCATTTCCTATTTATTATCTTCTACTTCTCTGAGAATGAACTGTATAAAATAAGCTTCAGTCTACTTGCATTTATCTTCTAAACCCAATCAAATAGGATATTTTTACTTTTAAAAGAAGTGAGGAAAAGACCAGAGTTTTATAGGAGAAAGGAAGGAAAAAACGGGCACAAAACCTCAGAAGGCAGCTGTTCCCAGCAGCTTTCTAGTTAACAACCTAATGCTGCCTCTTGTATCTGTGTCTGTATTCCACTTCTGTATTAAGTCTTCAGATTGTAAGTCTTTTCTGGCAATTTTTTTTAAAGCTCTTTTCCTGAAACTTTTTATGAGTGGCTGTGGCACCATGAATGCTGCTGAATATCTTTAAACTCATCACAAAGGCAAGTGCATAGCTTAAGGCCACTGTGGGTAAGGAAACCGAGTGTCCTCTGTGCCTTTTTCCTTTCCTTGACATAATTCAAGAACATCGCAAAAATGAGACTAAAACATTCTCATCTTGGTACATGGTGCATATGGACACTTGGAAGCTTAAAGAGGGGTGGTGGTATCTAGAACTCAGAAGCAAGCTCTAAATCTATTAGAGCAGACTTTCTGACGTACCTAGCTTTATGTGTTGACTTTGCTAGAGTATGATAGAAAAATGAAGACTCTTTAATCAGCTCTAGTATTGCTTACTAAGAGGGTAATACTAAACTTGGAAAATTATTTAAGTAGGCTTTATCAAGCAATCTGGATTTGTTTGTTTTTAATATAGTTTTTAATGGATATGTGAAAACCGAAAGAAACTTCAAAGGTTTTTTTTTTTTAATGGTGCAGGTGAAGGTGCCAGTTGCTATTTGGTATCACACTCTACAAAAGCTTCATTACTTTATTTGATGCTGGTTGCTAAGCAGCCATTGCACAGAGCATAAGTCTACTGGGTGCCTTTACAAGCCAGAGGCTGATGCTGCACTGTTGATGTCATGTGAGGAAATAATGCACATGCTCTAACTGGTAAACAGGAAAAAGAACCTGGAAACAAAGAAAATGAACAAAATGACAAAAAGATTGATTGAAATAAAACTTGATCAACATAACTATTTTGAAACATTCCAGGAAGGTTACTTCTTGTCAAACTTGCCTGGGGGTGTTTGTTCAAAGCTTGTATTTAATAAATGAACATCTGACTTAAAACCTTTGTTATCATTTCCTTTATTACAGTATTAAAAATCTAGGAGCAGTTTCAGAAATCCCTCTGAAAATTTACAGGGCTCTCAACATTACTTTTTTTAAAAAGTGGTAACAAATGTCTGGCCTGGCTGACCTAACCTGACTTACCAGGCCTCGAGACCCTGGAGTTATCTTCAGATGAGTCTCGGGGCATGTTTTTTCCTAAGCAGATCACTTTTGGCTTCACTTTTTTTCATCTGGCCTAAAGCCCAGGTCTTTTTTTTTTTTTTTTTTTTGCCTTGGCCACACTGCAGCATGTGGAATCTCGGTTTGCTAACCAGGGATTGAACCCTTGCCCCTTGCATTGGAAGCTCAGAGTCTTAACCACTGGACTACCAGGGAAGTCCCCCAGGTCCTTCATTCTAATCATTCATTATCAAGTTCCATTTTCTTGCCCCTTGTTTCGGTAC EMBV3_27502 TGCTTTCACAAAGAGTAGTTATCAACCTTGAATAACTATGGATTATTTTGTGAAGGGGGA Gene GeneID:533936|KLHL2:NM_001102160:22_cdna Constitutive 3 NULL GeneID:533936 17 GENE KLHL2 MGC155024 kelch-like 2, Mayven (Drosophila) EMBV3_28538 ACTGTCAAGCTTTATCAGGCAGAACAGGAGAGCTTTGAAGGTACAATCGTGTGGGAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37675 CAGAGGAGATCAGAGGTGATTCTAAGGTTGCACACTGTTAACCAGGCTCCCATAAGGTGC Gene GeneID:515208|RPP14:NM_001077924:175_cdna Constitutive 0 NULL GeneID:515208 22 GENE RPP14 MGC142526 ribonuclease P/MRP 14kDa subunit EMBV3_36409 TCTACAGCAAGGATGCAGAGTCCGGCTTCCAGCCCAGAACCATCAAGGACGACATGCTGT Gene GeneID:521465|PRSS27:XM_002697926:577_cdna Constitutive 0 NULL GeneID:521465 25 GENE PRSS27 NULL protease, serine 27 EMBV3_22256 AGAACACCAGAGGAAAGTACAGCATCTGTGAGTGGCTGAGGGGTGGGAGGAGGAATACAA Gene GeneID:504618|PPEF1:XM_002700377:31_cdna Constitutive 2 NULL GeneID:504618 X GENE PPEF1 NULL protein phosphatase, EF-hand calcium binding domain 1 EMBV3_24616 GGAGAGGGCCACAATGACGCTTTCTTGCTACACATTTCTGATGACTCCTTGGGCTATCTG Gene GeneID:537528|LOC537528:XR_084637:414_cdna Constitutive 0 NULL GeneID:537528 21 PSEUDO LOC537528 NULL similar to mCG18581 EMBV3_21115 GGAAGGATGCTCCAGAAAGCAAACAGTGGTAAAAACCCGAGCTTTGGACTGTGCCTTCTC Gene GeneID:540771|PLCD4:NM_001046489:119_cdna Constitutive 0 NULL GeneID:540771 2 GENE PLCD4 MGC134084 phospholipase C, delta 4 EMBV3_37255 GGGGCCGAGACTGACAATGCTATCCCGGAGACATTTGTTGGACGTTTCCGCCGCATCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35504 CCAACCTAGAAGGACCATTTGTGAACTTACTGCCTCCCCTGCTCCAAGAAGACTATCTCC Gene GeneID:541184|E2F3:XM_002697547:323_cdna Constitutive 0 NULL GeneID:541184 23 GENE E2F3 NULL E2F transcription factor 3 EMBV3_21060 ACCCGCCAAATAACTGTGGGGACACCCACTATGGAGAGAAAAGGTTTGATGGCTAGCTGA Gene BVT0102_307213 - 1 EMBV3_11981 GK000010.2:2929589-3206566 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015652 1 XLOC_008531 NonCoding TCONS_00015652 XLOC_008531 NonCoding NonCoding - 10:3204508-3206507 - TSS11009 1521 1 TCONS_00015652_2 198 2 0.23973973973974 0.00131289175217724 8.66400069768927e-17 3.02642868392433e-05 6.70179525071779e-55 2.55591952902828e-90 3.82950083452631e-75 5.69898430284254e-14 6.13265699744211e-56 1.25366640622568e-08 5.23799542611323e-210 0 0 1.33635512275458e-144 1.87822752869803e-18 0 0 0 0 4.37529570720692e-30 2.66396018936575e-30 0 0 2.16141400260386e-09 9.00002792149179e-12 1.04228126330877e-19 9.13953346950647e-16 5.88750403069673e-05 0 1.57888269181215e-08 2.5101310988185e-118 XM_005211182.1 KCNN2 PREDICTED: Bos taurus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), 0.0 1263 100.00 0.45956607495069 NM_001278204.1 KCNN2 Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), 1e-148 531 92.29 0.228139381985536 0 noncoding 0 0 0 0 -0.00878702156787295 0.944311397152589 0.0109207830936501 0.85590946674747 GGCCCGGAGCCCAGGCTGCCGAGGCTGCCCGTGGGGCTGGCGGCGGGCTGCAGGCTGTGGCACTGGTGGTGCTGGGAGGCGGACGCTGGCTGTTGCGCGTACTGCTGCCGGAGCGCACTGGCATGGCTGGACGGCGTCAGCTCGCTCACATTGAGCTGGCTGCCCCGGCGCGACGAGCAGCAGCAGCAGCACGACGAGCCCGACAGCGGCGAGGAAGTGCGGGTCCGGAAGGCGCCGCCGCCGGGCGAGGAGGTACGGAGCAGCAGGGACAGGTTATCCCCCGCCCCCGCCCCCGGGGCACCGGAGGAGGCGCAGCTGTTGCACCGGAGGCATGGGCTGCTGCCGCCGCTGCCCGGCTGCTGGTGCGCGAGATGCGGGTGGTGGTGAGGGTGCGGGAGGGACGCGAAGGGCGCGCACGGCTTGTCCTGGCTCTGCTGCTGCTGCTGGCAATGCAGGTGCGAGGAGCGCGGCGGCGGCGGCTGCTCCGAGAAGAAGCCGCGCTGGAACTGCAATGGGGTTTCCATGTCAGGGCTGTTAAAGCTGCAGGGAGACCAGGCGGTGGTGCACCCTGCGCAATGCGTTATGGTCGGGAGCGGAGACTCCTGCTGCTGGTGCGAGGAAGGGCCCATGCCGGCTCCGGTAGAATCCAGGCGGCGAGTCCGATTGGTCGGGCGCACCAAAACAATGGGCATGACATCACCTGCGGGGACCAAGACTGAGTTTGCGGCGCGAGGTTTAGGGGAGCATGTGTGTGTGAGAGAGAGATGGGGAGGGGGGAATCTGCAGGATGAAAACCCTAGGGTCCTCAGGCTAGGACAGGGGGAGGGCGAGGGTTCCACTTGCTGATGATCGGGGACTACCCTTGAGCCCCGAGGGCTGGGGAGTGCAGCGGGTTTGCAGTGAGAGGGGGAAAAGGTAGGGGCGTCCCTCCTTCCCGCGCCACAGCCCCCCTAACTGTTGCCGGACGTGCAGTCTCGATCACTTGCCCGGGCACTGCAGCACGTTGGGCCACCCCAGCCAGGGCGTCAGGCGAGGGAACGGTGCGGAACCCGGGGCCACTCCTTCACCGGCATGCACGCCTCTTAAGAGCTGCGGAGCAACAGCCCCCTCGCCCCACGCCTACGTCTCCCTGATTGTCCTACTGAGAGTGGGATGCCAACCACCCGCCAAATAACTGTGGGGACACCCACTATGGAGAGAAAAGGTTTGATGGCTAGCTGAGCCAGTGCAGCAGGGCTTGGTGAGAACCCCGGCGCCTGAGCCCCAGCACAGACAAAGCAAAGGCGGATCACTGATGCGCGACACCGAGCATCTTCTGTGCCTGACTGCAGCGGAGGATGGAGAGGGGCTGGCGCGGGCTGATTCACACCGTCAGTCACACGCTGGCTGGGAAATTATTAACAATGAGAACTCGGGCTGAATAATAGTTGCTTGAGGACAGTACTGGAGTTTTGCTCTAGTTAGGTATAATATTTATTTGCTAATAAACCAATAAAAACTACGTTTTGTGTCTCACAAATT TCONS_00012340 TCONS_00012341 TCONS_00012342 TCONS_00012343 TCONS_00012344 TCONS_00012345 r 5' 7 TCONS_00012348 r 5' 0 EMBV3_32219 CTCAGGTCAGCCGTTCTTCTTTCCTCCTGGTCCTTGCCCCCAAGTTCATATGCTTTATAG Gene BVV0102_241897 + 0 NULL GK000007.2:30452488-30863478 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219955 1 XLOC_133272 NonCoding TCONS_00219955 XLOC_133272 NonCoding NonCoding - 7:30744760-30745423 - TSS163953 663 1 TCONS_00219955_1 76 0.14630467571644 1 0 0.000184692590787057 0 0.000118640987502078 0.000112725963916563 0.00020106206351281 6.47430828220215e-05 8.79594634853712e-05 0 0 0 0 0 0 0 0 0 0 0 0.00133395859142304 0.000856897537596294 7.55498459764557e-05 0 0 0 0 6.3759862394801e-05 6.62799470126577e-05 0 0 0 XM_005193729.1 RBM25 PREDICTED: Bos taurus RNA binding motif protein 25 (RBM25), 2e-32 143 96.55 0.129713423831071 0 noncoding 0 0 0 0 -0.214358319395933 0.213494802169545 -0.0193783116478595 0.738815284129956 GTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCGCAAAGAATTGGACACGACTGAGCGACTGATCTGATCTGATCTGATATAACATGAAGACTTTTTCACGCTGTGTTTGATTCTTCATGAATGTGCTCAATAGTGTTCTTGTTTTATCACCTATAATTCTTGATTCTTGTCTTCTGCCATGAAGTGCCATGAAGTAATCCTAATCCAGAAAGATTTGAAAATGAAAAAGGTTCTCGGTACCTGTTCTTTATCTGTCCTTATACTGAGTAGGCGTTTCTCAGGTCAGCCGTTCTTCTTTCCTCCTGGTCCTTGCCCCCAAGTTCATATGCTTTATAGCCCTCCCAGCAGGCCTGTAATTCTGACATCTGGATTCATTATCCTCCACTTGCTCTTCCTTGTCTTGGAGTAAAAACGTCAACCTAAATATTGGGGGAAAAAATGATTCCATGGTTAACATTCACGTGGGAAACATTTTTGAGGCTATTAAAGACATTTAAGTAGCAAACAGGCACATATCGTATGCTTACAAATTTAAGGGGGTGATTATTTTAGCAAGAAAATTGTACTGTTCATAGGCAAAGATAGCTACCCTTGCCTCTTAATGTGTTGTCTGATCATTCCTTAAAAGGAAAATAAAATCATTCAAATTTGTT TCONS_00212707 TCONS_00212708 TCONS_00212710 . 3' 291652 TCONS_00212707 TCONS_00212708 TCONS_00212710 . 3' 292314 EMBV3_15668 CTGGTTCAAGCGGTGGCGGGAGCCCGTCAGGTTGGCAAATAAACAGGATAAGGAAGGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39443 GTCTCATGAACTGGAAACTTTGTGGACTCCTGGCTGCCTCTTCATGGTTCCTTGGTGCCT Gene GeneID:515414|LOC515414:XM_002697552:337_cdna Constitutive 0 NULL GeneID:515414 23 GENE LOC515414 NULL similar to olfactory receptor, family 2, subfamily M, member 2 EMBV3_14673 AGGCCGCCAAGCACAGGGGTGATGGAATGTCGGAAGACCTTTGGAGAACCTTATCTTTAA Gene GeneID:514906|DENND4A:XM_002690472:386_cdna Constitutive 0 NULL GeneID:514906 10 GENE DENND4A NULL DENN/MADD domain containing 4A EMBV3_38353 AGTTTCAAATCAGAAAAGTAGTTCATCCTCATTGCAGGGCATTTGGGAGATATAGAAGGG Gene GeneID:281782|GHRHR:NM_181020:4_cdna Constitutive 0 NULL GeneID:281782 4 GENE GHRHR GHRH-R GHRHREC growth hormone releasing hormone receptor EMBV3_24216 AAGCATCAAAGAACTTCAGTTTTACCGAAATAACATGCTGTTTTCATTTATGACACAGCA Variant GeneID:540139|REXO2:NM_001081735:119_cdna 698^939 2 EMBV3_24468 GeneID:540139 15 GENE REXO2 MGC148716 REX2, RNA exonuclease 2 homolog (S. cerevisiae) EMBV3_26498 ACGGCTGCTGCCAGGGATTCCTAAGTGCCTGTCGTCTTGTGCTGAAACAAGGTACTGACA Gene GeneID:507819|SPG11:XM_002691092:221_cdna Constitutive 0 NULL GeneID:507819 10 GENE SPG11 NULL spastic paraplegia 11 (autosomal recessive) EMBV3_41117 TCCCTGCTGGAGTATATAAACAACCCAGTTTCCCGAACTCCATTCTCCTGCCCTAGACAC Gene BVT0102_289046 + 0 NULL GK000010.2:37664679-37668166 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28635 AGTGCACATTGAACACATCTGTGCATTTGAAAAAGCAGGCTTTCTTATGCTGGCAGGAGC Gene GeneID:505754|DUSP19:NM_001098878:14_cdna UTR3_Alt 2 NULL GeneID:505754 2 GENE DUSP19 NULL dual specificity phosphatase 19 EMBV3_28224 TTTCCATGTCCTTCTGGCTGTAGATAAATAATAGAATGTAGTTTTGTTTATACATGCAGG Gene GeneID:784386|HOXA10:NM_001105017:28_cdna Constitutive 0 NULL GeneID:784386 4 GENE HOXA10 MGC155216 homeobox A10 EMBV3_40517 ACACTCGTAATCACTGTGCTTTCCTTGCCGTGGTCTGACAGCTGGGTCCAGTGGTCCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28847 GAACCAGACCAGGAACTGCTGGCAGAACTACCTGGGTGTCAACTTGGGACAATCGCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16791 CCAAATATGGTTCCATTCCTAAACTTATATGCACTATTCTCAGAGGTCAAAATATGACTC Variant GeneID:533520|OCIAD1:NM_001015648:110_cdna 376^511 2 EMBV3_36437 GeneID:533520 6 GENE OCIAD1 NULL OCIA domain containing 1 EMBV3_05233 GTGGGGACCAGAGTTTGGGAACTGGGATTGGTCATGTGGGTTGGAGGATGGTCATTGTTT Gene BVT0102_318499 + 0 NULL GK000019.2:44496189-44509433 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097194 TCONS_00097193 TCONS_00097196 TCONS_00097195 1 XLOC_058194 Coding TCONS_00097193 XLOC_058194 Coding Coding LSM12 19:44506290-44529146 = TSS72076 5122 1 TCONS_00097193_1 195 0.0685279187817259 5 0.776110260336907 4.00676007449225e-13 7.69087310817293e-12 7.90084072587251e-13 9.85220606210595e-05 2.00589539529726e-12 1.08983122592768e-12 4.82292422391885e-05 3.80259011571077e-16 2.44456347824416e-06 0.00026874991678772 6.74854522611299e-05 1.70306661494684e-10 2.23505106412467e-14 3.12861719262405e-12 0.000158996993261949 0.00330254668049238 0.00431665360190758 0.00418758236198131 1.59212305913343e-14 4.5438302513643e-14 1.70405768638824e-12 0.00207789595375358 0.00192949815167822 9.53312904918927e-06 3.47725033076208e-12 9.31376533884338e-13 1.62500004121635e-12 0.000654040428115161 6.716042108665e-05 0.000487937240657719 XR_228743.1 LOC100849947 PREDICTED: Bos taurus uncharacterized LOC100849947 (LOC100849947), 0.0 7259 100.00 0.785630613041781 NM_152344.3 LSM12 Homo sapiens LSM12 homolog (S. cerevisiae) (LSM12), mRNA. 0.0 3057 90.24 0.433619679812573 TCONS_00097193_1 sp|Q0VCF9|LSM12_BOVIN LSM12_BOVIN Protein LSM12 homolog; 7e-143 400 100.00 0.994871794871795 1 coding 0 0 0 0 -0.0872631303312192 0.498378685181263 0.0137450735149403 0.768416932903737 GCCCCGTGCGTCGCGGCGCGGCGCTCACTGGGGGCCCGGCTTTCGCCCGCTGCTGCCGCCGCCGCCGCCGGCCGCGGCTGCTCTCCCAAGATGGCGGCTCCTCCGGGCGAGTACTTCAGCGTTGGGAGCCAGGTGTCGTGCCGGACGTGCCAGGAGCAGCGGCTGCAGGGCGAGGTGGTAGCCTTCGACTACCAGTCCAAAATGCTGGCTTTAAAATGTCCCTCTTCCAGTGGAAAGCCCAACCACGCAGATATCTTGCTTATAAACTTACAGTATGTTTCAGAAGTGGAAATAATTAATGACCGAACAGAAACCCCTCCTCCCCTAGCTTCACTCAACGTTAGTAAGCTTGCCAGCAAAGCACGGACAGAGAAGGAGGAGAAGCTGAGCCAGGCCTATGCAATCAGCGCTGGTGTCTCCCTAGAGGGCCAGCAGCTCTTCCAGACCATACACAAGACCATTAAAGACTGTAAATGGCAAGAAAAAAACATCGTAGTCATGGAAGAAGTTGTTATTACACCCCCATATCAAGTGGAAAACTGTAAAGGCAAAGAGGGGAGTGCACTGAGCCATGTACGCAAAATAGTTGAAAAACATTTTAGAGACGTGGAAAGCCAAAAGATACTGCAGCGTTCACAAGCCCAGCAACCACAGAAGGAGGCTGCCCTGTCATCCTGAGTCCACACGTACGGAGGACTCTTCCAGCATCCAGCCAAGGAGGCGATGGTGGTGGCTTCAGCGGAGGCAGGCCGGGGGAGGGAAGGGATCCTATATTTCCGGTTGGCTCTTGTTAACAGAGGGTCAGCATTTCCAAATCTTAGACTTGAACAAACAAAACACCCAACAAAAAAGAACAAGAGAATAATTTAAAAGTTGAATCATTACTTGACTAACAGACTTCGGTCCACCATGTCCTTTTCACAGCCCCCTTCTGGAACAGTCACCTTGTTAATTTTATTTTTGAAAATTCCTTTCTGCTCTGCCCTTTCACCTCTGACTTTCCTTTCCCAGTCTGTCTCTGCCATTCTGTTTTTATAAGTGGCTACACTTGCCTTCCGAGTGATTGAAAGAAACTTTTACATCTTCTCTTCCAAAATAAAAGTAACAAGCTGACTGTGATACTTAAGTTGAGACTAGAGCAGCAGACAAAGGTCTCACTTTAAATTTTTCTTTTTTTTTTCTTTTTTTCTTTTTTTGCACAGGGCATGGCTTGAATTAGTTTTATTTTTCTTAACTTTAAATATATATATGAAAATATATATTAAAATGTTCTCTAAATATTTTCTGCTTCTTGCAGGTCTCTTTTTACTAGATCATGGCCACTCTTCCCACCTCATCCCTCTGAGAATAAAAATGTATCGTCCTCCCCACCACCCATAGCCAGGCACCTAACTTAGTGCACAGCGAGGATCTCCCGCAGCACTTTGTAGAGCCAGTGTTTGCAGATGGGATCTGGCTTTGAGGGTTCCTGGTGGCTTTTTAGTCTTCAACTATACGTGTACCAGTCTCACATTTGGCAAAAACCTCAGGATTCTCCTTTTGCCTTTTTCTTACTTCATGGTACTAGAAGAACTTTCTCACCACCCTCCTATCTCCTCGATGGGAACGTCAGCTGCCCCGTCTCTTGTGCCCTCTGTAGGAAGAACTATTTTGCATGGCACATCTCAGCTCTTCCTTGAAGGATGGTTTTCTTTCATAAGAAACCCAGAGTCCACCTATCCTGACCTCTTTAAGTCTGTATCCAGAGCCACTAGCCCAGGAGAAAGTTTGGGTGACCTGCCGTTTCTCTTCTGCCAACCTACTGCTCTTACGACCTTCCCTACCACCCCTGAAATTTTACAAGCTTACGACAGTTTGTATGTGCTCAGCCAATGGGCAGAAAACCTGGGAAGAATTTCTGGACTTTAGCCCACCAGTTTGTCTGGTTTGACTAACCTGCTGAGAGCTACCTGGCACCCTTGCCCCTGTGCCTAGGCAGTCCAGAGGGGCAGAGTGTATCAGGTACTGTGGCGTGGGACATGGGTGATGCTCATGTGACTGGCTAGAGCTTTGGGGGTGGGGTGGGGGTTAATGAATATTTTTTTGGCCATGATCTCTTTCCCCTTCCTTTTTTTTTTAATTAAATAAATGGATCAAAATTAAATAATTCAAGCCCTGCCTTCAAAATGAATTTTTTTTTTTTTAGTATTGTTTAGCAAAAACAATAAAACCCAAATTTTTTTAACCATCACTCATGTCTCGGGTTTGTGCCTGCTTTAGAGGCCCCAGAGGGAGGTGTCTGAGGATGTGTGTGTTTGGTTAAACTTTACCTTTAAACTCTCTGCTTCCTACTCTTACCCTCTTTCCTTCTACCCCTGAGAACTCATCCAGAAATCCAGTGCCAAGTGTATAAGAAGGGGATCCAGGGTTGGGAGTTGTGTGTAAGTGGAGTAGAGGAATGAATTGGGTGGGTACATATGTAAGACCTTTGTTCCAGGACTGGAGGAAAAGTGAGAGAAGACTAAGAAGTATACTTTCATATCACCTGCCATTGGCCAGAACTTGATTTAAAGTACCAAGCCTTTGATTTAGTCTGCTTGGAAGTGTGGACTTCTGGAGAAGGTAAAAGAGGGAACAGAGAGGAGACCTACCATGCAAGGTCTAGAAAACCTGAGAGATGCATTTAAAGCAGTGAATGTGATACATGGGAAATGGCATTCCTGGAAAGGAGCTCTGTGTCACGTGTCCCATGTCGTTACTTCCTCCCCATTAGTCTCTAGGTCTGTGAATGGGAGGCAGCTCTGGTAGGAAGCACTTTTTGACTCTGGTTTCAGTTTACGAAATGATGTGGGGGAACTTAAAGCAATTCAAGAGGTGGATCAGTATGGTGGGAAAGACAAGCAGCGTAGAAGGAAGAACAAGGGCTTTGGAGACAAAAACGTTGGCTTCAAATTGTCACCCTTCCCTCTCCTCACTTCTGACTCTGGATAAGTCATTTTACCTGTCCATGCTTTGGTCTCCCCAGTTGTGAACATGAAATAATACTCATCTGGAGCTGCTTGTAAAGGTTCAGATAGGTTGGTTTAAAATGGTTGCTACTTAGAAGGTCCTCTGTAAATGTTAGTATGCATTTTAGCTTGTTCCTAGGATGGTTAAATCTGGAGATGAGACTGGATTAACTGGTTTTCAGAAGCTCCAACTTGTTTTAGAAGTCTTTGTCTAGATGTCATTTTAAGTGAGACTAATAGGTAAAACATTTGGGGTCCTAAGAACCCTGCCCTCTCTGTCTCTCAGGTCTCATCTCTACCTCTTCACTGAAGCTTCTGAGGAATTTGATTATATGAAAACCACTCATTTTACAGAAAGTGAGTTGGTTCCACCAGGGCTTAAGTGACTTGCTGAGAGTACCGCCGCTGCCCACAGTGGCAGAGCTGGAATGAACCCCAGGCTTCATGCACTCATGGGCTCTTTAATATTGCCCTGGTACTTGGCGAACTGATGGCATTTTCATATTGCTCACTTCTATTAGCCAGGTTTGGGATGGTGTACAGAGAAGACTGGTGAGTGTGGTAAGAATTGTCACCTAGATTTGAAGAAATGACGCAGTGTTGAGGGCTTGCGTCTCTGATAGAACACGAACTGGTGGTTTTGCAGTGTCTGCTTGGTTTTGAGGCATTCTCTTTTCTCCTCAAACACACACACAAACCCTTATATCCCAGTGCCTGGTCACCACCCCACAGCCACATCTGTGCCTTTGGGTTTTCTTCTATTTAGAACATCTGGTCAGTACGGTATAAACAGCCTTCCCACAATGAGTTGATACTGAATCTGTACTGTGTAAGTCTGAACAACTGATTGCTGATTTTTGTTTGGTGTTTTGAAAGTTGCTCAAGCACTTCAATATTAGTTAAAGGGCTGCAGCTTGCGAACCACTGATTCAAGGTAACGGCTCCTTGACGTTTTTGAAGCTACAAATTGTGTCAAAATCTGTTTTCCCATAAGACATAAAGGAAGATCAAGGATGCTTTCAGTCATACATGGAGACTCCTGTCCTGCCAGTGTGGCAGATGCTGAGAACGTATAATGAGCATGTTTGCTACTAGGAGCTGCACTGTATGGGTTGAGTGGTGGGGACCAGAGTTTGGGAACTGGGATTGGTCATGTGGGTTGGAGGATGGTCATTGTTTACATAGCAGATTTGCTTTCCCATCACTGCTGGAGGCCACTGGTACCAGAGCATTCCCCTTTAAGAAACTTGAATTGGCCATGTACTGCCCCAACTTCAGGGGTGTAATGTAACAGCATGAAGTACCTTACGGGTGAGAAAGGGGTGCTGTGGGGCTGCCATCCACTGGTGATAGACTGCTGCTGGGTAATAAAGTTTCAAAATGAGTTTCTTTTTGTAATATTATAAAAGCCTTACATGGCTCATTACAGGCACACAAGAAAGCAAGGCAAACACGTTCCATCCAGGATCACTCAGAACATTATTGACATCTTTCATATCCTCTTGATGTTAACACCCTTCTCCCTGCCCCTTACATTTCTGAAAACACAGCACGCTTTGCTGCGTCAAAAGAAGCCTGCCAACCAGTTCCCTCATCCCCAGTCCACAGGTGCACTCTGTAATCTCTGGGCATCTTAGAATTAACATATATGAAAGGCATGGAGGCTGGGTGACCTCTGAGATTACTTACAGCCTCAATAATCTTCAGTTTTATCTTCTCTTTTCCTACAATGCCTTGCTTCAGTGCCACCTGTGAAGCCATCCTCGACAGTGAAAATGGAAAGTGATTCCTAAAATTTATATCACTCACATGTGGCATTTATGACTTGCACTGTAATTATTTTGGTTTATCGTTAATGGTCTGATGGGGAATTTTGAGGCCCTAAGATAAGGATAATGTAGTATTCCCTGGCATTCAGCCATTGACGAAACTGAAGTCATTTTGAGTGTCGTCATTTTAATAGCTGGATGAGTTGCCTGAGCCAAGATGAAAAGTGGTCTAGGCTGACTGAGTTTTGAGGAAAGCTTGGAGTCAAGTTTAGAAAACTGATGAGGGATCAGTAAAGAACATGGGAGAAACTGGGAAGGTGGGTATACCTAGTTTCAGCTTCAAAAGCAGCAGGTTTCTCAAGAGAC EMBV3_03542 GCAGTAGTCTGCCCTTGTTCTCATATACCTGGACTGTGGACTGCTTGACTTCATTCTTCC Gene GeneID:768081|LOC768081:NM_001077136:120_cdna Constitutive 1 NULL GeneID:768081 16 GENE LOC768081 MGC142407 hypothetical protein LOC768081 EMBV3_06886 GCGTGGCAGTGAAATGGGTTGGTGTCGGCAAGTCCAGAGATTCGATGATCCAGCTGTTTT Gene GeneID:784089|ADSSL1:NM_001099192:345_cdna Constitutive 1 NULL GeneID:784089 21 GENE ADSSL1 MGC143433 adenylosuccinate synthase like 1 EMBV3_41861 CTTCAGTTCTCTCCTTCTCCATCAGCAATGGAATTCTCGAACTATGTCAGTTTCAGCTGG Gene BVT0102_436205 + 0 NULL GK000003.2:96456723-96658646 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24876 CTCATTTCATCATTTGCGTTTGTAAAATGCTTATTAGAACTCTCCCCTTTAAAACTTTGG Gene BVV0102_319871 - 1 EMBV3_29495 GK000002.2:25776192-25826620 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104824 TCONS_00104822 TCONS_00104823 1 XLOC_062460 Coding TCONS_00104822 XLOC_062460 Coding Coding MYO3B 2:25823913-26260849 j TSS77533 6140 1 TCONS_00104822_7 1261 0.0820846905537459 36 0.986029958689508 7.42721044489108e-05 0.000484175306054032 0.000405562119879329 0.000232321542167587 0.000213228001722025 0.000127064174472034 0.00032604579148677 6.74133231969438e-05 0.000189988395064054 1.71520464231364e-05 1.657767255775e-08 3.58700757518727e-07 9.28060414180151e-06 2.93533718838135e-05 1.44501723677381e-10 2.04535508333373e-47 0 0 0.000185293665330427 0.000128123682404359 1.99960419367803e-05 0 7.51434076814333e-09 0 0.000416365230849819 0.000221508994181117 0.000311061432280712 4.21950849921213e-09 1.9877643284631e-08 5.48415301130888e-05 XM_002707802.3 LOC536123 PREDICTED: Bos taurus myosin-IIIb-like (LOC536123), transcript 0.0 7184 99.16 0.660097719869707 NM_138995.4 MYO3B Homo sapiens myosin IIIB (MYO3B), transcript variant 2, mRNA. 0.0 5591 90.88 0.654397394136808 TCONS_00104822_7 sp|Q8WXR4|MYO3B_HUMAN MYO3B_HUMAN Myosin-IIIb; 0.0 2359 90.76 0.984139571768438 5 coding 0 0 0 0 0.083427770156219 0.618887811000857 -0.0484654994951169 0.324823854255893 ATGCCCCAAAGACCTGAACTCCCTGATGGCTTTGGGGAAGGACTTTTAAAGGCAGTGAGACATCTGTATGGATTGTTTCATTACAACGCCACGATGCTTGGACTTGAATCGCTTCCAGATCCCACAGATACCTGGGAAATTATAGAGACCATAGGTAAAGGCACCTATGGCAAGGTCTACAAGGTGACTAATAAGAGAGATGGGAGCCTGGCCGCAGTAAAAATTCTAGATCCAATCAGTGATATGGATGAAGAGATTGAGGCAGAATACAACATTTTGCAGTTTCTCCCGAATCATCCCAATGTTGTAAAGTTTTACGGAATGTTTTACAAAGCGGATCACTGTGTGGGAGGACAGCTGTGGCTGGTCCTGGAGCTGTGTAATGGGGGCTCAGTCACCGAGCTTGTCAAAAGTCTACTTAGGTGCAACCAGCGGTTGGACGAAGCAGTGATCTCATACATCTTATATGGGGCCCTCTTGGGCCTTCAGCATTTGCACAATAACCGAATCATCCACCGTGATGTCAAGGGGAATAACATTCTTCTGACAACAGAAGGAGGAGTTAAGCTCGTTGACTTTGGTGTCTCAGCTCAACTCACCAGTACACGTCTACGGAGAAACACATCTGTTGGCACCCCATTCTGGATGGCCCCTGAGGTCATTGCTTGTGAGCAGCAGTATGACTCTTCCTATGACGCTCGCTGTGACGTCTGGTCCTTGGGGATCACAGCTATTGAACTGGGGGACGGAGATCCTCCCCTCTTTGACATGCATCCTGTGAAAACGCTCTTTAAGATTCCAAGAAATCCTCCACCTACTTTACTTCATCCGGAAAAATGGTGTGAAGAATTCAACCACTTCATTTCACAGTGTCTCATTAAAGATTTTGAAAAGCGACCTTCGGTCACGCATCTCCTCGACCACCCATTTATTAAAGGAGTCCACGGAAAGCTTTTGTTTCTGCAGAAGCAGCTGGCTAAGGTCCTCCAAGACCAGAAGCATCTAAATCCTGTTGTTAAAACCAGGCATGAAAGGATGCACACCAAAAGACCCTATCATGTGGAAGATGCTGAAAAATACTGCCTTGAGGATGACTTGGTCAATATGGAGGTCCTGGATGAGGATACAATTATTCATCAGCTGCAGAAGCGTTATGTGGACTTACTTATTTACACATATGTTGGAGATATCTTAATTGCCTTAAACCCCTTCCAGAATCTAAGCATATACTCTCCACAGTTTTCCAGACTGTATCATGGAGTGAAACGTGCCTCAAATCCCCCCCACATATTTGCATCAGCAGATGCTGCTTATCAATGCATGGTTACTTTCAGCAAAGATCAGTGCATTGTCATCAGCGGAGAAAGTGGCTCTGGGAAGACGGAAAGTGCCCACCTGATCGTTCAGCATTTGACTTTCTTGGGAAAGGCAGATAATCAGACCTTGAGAGAAAAAATTCTGCAAGTCAACTCTCTGGTGGAAGCCTTTGGAAATGCATGCACTGCCATCAATGACAATTCCAGCCGTTTTGGAAAATATCTGGAAATGATGTTTACACCAACTGGAGCTGTGATGGGAGCAAGAATCTCTGAATATCTCCTTGAAAAATCCAGAGTTATAAAACAGGCAGTAGGAGAGAAAAATTTTCACATATTTTACTATATTTATGCTGGTCTTTATCACCAGAAGAAACTTTCTGAGTTCCGACTTCCTGAGGAAAAGCCTCCTAGGTACCTAGCTGATGAAACTGGAAGGGTGATGCATGACATAACTTCCAAGGAGTCTTACAGAAGACAGTTTGAAGCAATTCAGCATTGCTTCAGGATTATAGGATTCACTGACAAGGAGGTGCACTCAGTGTACAGTATATTATCTGGGATTTTGAATATTGGAAACATTGAGTTTGCAGCTATTTCCTCTCAGCATCAAACTGACAAAAGTGAGGTGCCCAATGCAGAAGCCTTGGAAAATGCTGCCTCGGTTCTCTGCATCAGCCCTGAAGAGCTCCAGGAGGCTCTCACCTCACACTGTGTGGTCACTCGGGGTGAGACCATCATCCGCGCCAACACTGTGGACAGGGCCTCGGACGTCAGAGACGCCATGTCCAAAGGCCTGTACGGGAGGCTTTTCAGCTGGATTGTAAATCGCATCAACACGCTCCTGCAGCCAGACAAAAACATATGTACTGCAGACGATGGTATGAATGTGGGGATCTTGGACATTTTTGGATTCGAAAACTTTCAGAGAAATTCATTTGAGCAGCTCTGCATAAACATCGCCAATGAGCAAATTCAGTACTATTTCAATCAGCATGTTTTTGCTCTCGAGCAGATGGAGTATCAGAACGAGGGCATTGACGCTACCCCCGTGGAGTACGAGGACAATCGCCCCCTCCTGGATATGTTCCTCCAGAAACCCCTGGGACTGCTTGCGCTTCTGGATGAGGAAAGCCGGTTTCCTCAGGCAACGGACCAGACCCTAGTTGATAAATTTGAAGATAATCTTCGATGCAAATACTTCTGGAGGCCCAAAGGAATGGAGCTGTGCTTTGGCATTCAGCACTATGCTGGAAAGGTATTATATGATGCTTCTGGGGTTCTTGAGAAAAACAGAGACACTCTCCCTGCTGATGTGGTGGTCATACTGAGGGCATCAGAAAACCAGCTTCTCCAGCAACTCTTCTCAATCCCTTTGACTAAAACAGGTAACTTGGCCCAGACAAGAGCCAGGATAACAGCAGCCTCAAGATCTTTGCCTCCGCATTTCAGTTCTGGGAGACTCAAGGTGGACACTCTGGAGGTGATACGGCATCCGGAAGAAACCACCAACATGAAGGGGCAAACCATGGCTTCTTACTTTCGGTATTCTCTGATGGATCTGCTCTCTAAAATGGTGGTGGGACAGCCCCACTTTGTACGCTGCATCAAGCCCAATGATGACCGAGAGGCCCTGAAGTTCTCCACAGACAAAGTGCGGGCCCAGCTCCGCTCCACGGGCATCCTAGAGACAGTCAGCATCCGCCAGCAGGGGTATTCTCACCGCATCCTCTTCGAGGAGTTTGTGAAAAGGTATTATTACTTGGCATTCAGAGCACATCAAACACCTCTTGCTAGCAAAGAGAGTTGCATCGCTATCTTGGAGAAGTCCAGATTAGATCACTGGCTGCTGGGAAAAACAAAGGTTTTTCTCAAGTATTATCATGTTGAGCAGTTAAATTTGCTGCTGCGGGAAGTCATAGGCAGAGTGGTTGTGCTGCAGGCCTATGCCAAGGGGTGGCTGGGAGCCAGGAGATACAGAAGAGTCAGAGAGAAGAGAGAGAAGGGGGCTGTTGCCATCCAGTCAGCCTGGAGAGGATATGATGCTCGGAGGAAATTTAAGAAAATAAGCAACAGAAGGAGTGAGCCTGCTGTTCATATTCACGCAGGGTGCCCTTCAGACCAAAGCAGTGATCCACAGCCCACCATCACAGGGGGTCGCAGTGGAACTGCACAGGGTCAGTTCTCCAGCGAGCCTGGTGACCACAAAGTTCTGAGGGGCTCTGGCAATCATAAAAGCAGCCCACAAGCAGAATCCAGCAATGGCCATGCAGAGGCTTCAAGCACCTCTCCTGTCACTGAGAAAAATTGGCATTCACAAGCCCAGAGTTCTTCCAAAGGGTGTGATGTCTTCGCAGGACACTCAAATAAGCACTCAGTTTCTGGGACTGATTCTGTCTTTTCAGACATGCCATGCTGTTCCAGATTGCCCAGGACTGAGTCCTTCGAGGGGAGCCCCTGCAAAATCTGATTCAGAAAATGGTCTTGCACAGAAGCAGCGAACACCTCGCCGAAGATGTCAGGAGCCCAAAATGTTGAGTAGCCCTGAGGACACCATGTACTATAACCAGTTAAATGGAACTCTAGAATATCAAGGGAGCAAGAGGAAGCCAAGAAAACTTGGCCAAATCAAAGTGCTTGATGGAGAAGATGAATATTACAAATCTCTGTCGCCTGTGGACTCTATCCCTGAGGAAGACAACTCAGTCCACCCTTTCTTTTTTTCTTCATCTTCAAAAGGGGCATCTTTTGCTCAGCACTGAGCTATACTTTCTGCCTCCCAAGTCTGTTGAGGACACCTTCATCACCTTGACGGTAAAAAGAAAGGAATGAACTGGAAAGAAAATTTGGACTCATCAGAATTCGTGTCACATCATTTTGTAGCTGTCCATTCCCTGGTTGACTGTCTCCATGGGGCCATGAGTAGCTGCAGAGGAAGTATCTTGTCTCGTCCATCTTTGTGGCCACAGAGTCTAGCACAGTGCCCAGCACAGGGAGGACATGCCCACCTTGAGTGAGTGGAGAGACTTAGTTACACAAACATATCTGAAGTTACTTTCAATTATATGTGATATAGGATTGATCACTTTTCTTATACCATAAGCTCTGATTTTTCACTGAAGCTTGGACTAGTCCTATTTAATCATATTATACCATATATGACTCAGTGTGATCCAATGCAACAAACTCTTTTGAGTAACTACTCTGTGCAAAACAATATGTGAGACTGCTGTGTGATATGAAAATCCAATAAGACCCTTTCTCTAGAAAAGATGTTCTTTATATTCTTTCTACTTTAAACATATTTGGCAGATAGTACACATGGGAGTACCTAAATTTTGACAAAAATATACTTAAGGAAATAGAAAAAATAATTGTTACCAAAGTTTTAAAGGGGAGAGTTCTAATAAGCATTTTACAAACACAAATGATGAAATGAGGTATTTAAAGATCTCAGAAATTGTAATGTTACAAGAAAAAGAAATAGAGCCAATTATTCAATAGTTAAACTTTACTGTTTAAAAAATGAGTCTTGATCTTTTTTCCAGATCTTCTCCCTAAATGTATGTTCATAAGGTATGCAAATAGAGCAGAAACACAAATGCATTTTATTTTATTGTTTAAAATATAGTATATAGAATATATAGATTTTAACATTATTATTAATATGAGTAGTTTTGGCAATTTCACTTTCATCATTGATTCATCTACTTTTGGTTTGATAATGTTAGCTGTTCAAACTGTTGAATATAAATGATCGTAATCTCCCACTTGTCTGTGTACAATTGTATACACAGGCTTGTTTCTAATTAAAATATATCCATAAATAAAGTTTAAAAGGAAATAGAAGTAATTATAAAATCATAATTCAGAAGCTCTAAAATATCTGGTCACACAGAATAACTGCTTCGGTAATATCATAGCTCCTGACAGTACTTTAGAAATGCTGCTCATTATCAGTCACTGCATAGAGAAGACAGACTACAGATGTTACTCTTTGACTAGTTATAATGCCACAAACTCAAAGAGCATTCTTAAATCTTTAGATGAGAATGATGCAAACTGGAATCTCATAGATGTCTTACTAGATTTATGAAGGTAATGTGCATATAGCAAAACCAAAGCAAAAGTCAAACAGTCGAGAGCATTCTTCTTCTCGATGCCCCAAACTTAGTCCCTCTCCCAGAAGCAGTCGTTTTTAAAAATTATTTCTAATTCTTTTAATGGTTTCCATCATGTCTCTGAATAATTTGCTTTGATGTTGATTTGTCATTTTAGACAATATCTACTCTCCCCTCTATGAAAGATGTGCATTTATGTCAATTTCTTCACCCCTCTCTTCTTCCAGTGCTTACAATTTTGTGTTTAAATTGTTGTTGATTACCTTTTAAACTTTAAATTATGTAATTAAATACCTATTTTTTGTGCCATTGACTTCAGATAGTAGCTCTGTGAGAATGCCTGGCATGAAGAAAACCAGAAGACTGAAGGATAATATCAAAACAGATAGAATAATGATCCTTGGGCAAAATAGAAATAATTCCAAGAATAGTAGAACAGTAGTTTTAAAACTTCATGGAAACCATTGGTGTTCATGTTCTGAGCTACTGTTTCTTCCTCCATTTTGGTTCATCTGCAGATATGCCTCCATCTCCTTTCTAAACTTAATTTTTAAATATAGTACATATACAGAAATAGGCACAAATCAGAAGGCTTAGCTCAATAAGTTATCAGAAAGCGAGTATCTATGTAACCACTCCTACAGTCAGGAACAGAACACTGTCAGCACCCTAGAAGCCTCCTTCCCAATCACTACCACCCCCA EMBV3_04735 CCTTCAACTCCACTTTCATCTCCACCATAGGGACACAGCTGGTCAGGAACGGTTTCGGAC Variant GeneID:100125881|RAB8A:NM_001105481:2_cdna 132^192 2 EMBV3_22285 GeneID:100125881 7 GENE RAB8A MGC143064 RAB8A, member RAS oncogene family EMBV3_32812 AAGACCCTGTATCTTCCCCAATCCCTGGTCCTCACAGTCACAAGAATCTGGATGGAACAC Gene BVT0102_020160 + 0 NULL GK000016.2:3384778-3438788 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068531 TCONS_00068530 TCONS_00068532 1 XLOC_041721 Coding TCONS_00068532 XLOC_041721 Coding Coding SLC41A1 16:3364316-3386728 j TSS51295 5819 1 TCONS_00068532_4 514 0.0606633442172195 11 0.740841551024051 1.23671981702235e-10 4.65922733592033e-10 1.91609894959644e-10 1.30297288672881e-05 1.61890757928241e-06 5.78772224204157e-05 7.68276514726984e-11 6.27874671631475e-10 9.79765906409218e-08 1.99427820151635e-10 3.1894964706322e-15 1.09731181634093e-10 1.34940004879448e-13 3.46707588514774e-11 8.36439241068644e-12 0.000159075783431425 2.11660012255755e-18 6.24899718547144e-09 1.71627826762013e-11 3.69634179529641e-10 9.97400888262609e-11 7.12320511437021e-05 0.000219612156780757 0.000250572864568022 0.000458247501662126 1.45428929015733e-10 8.57193370255563e-05 1.51191475338911e-09 1.3853998905555e-08 1.23802782336454e-11 XM_005216683.1 SLC41A1 PREDICTED: Bos taurus solute carrier family 41, member 1 (SLC41A1), 0.0 8195 100.00 0.780718336483932 NM_173854.4 magnesium transporter Homo sapiens solute carrier family 41 (magnesium transporter), 0.0 3631 77.34 0.780202783983502 TCONS_00068532_4 sp|Q8IVJ1|S41A1_HUMAN S41A1_HUMAN Solute carrier family 41 member 1; 0.0 967 96.50 0.998054474708171 1 coding 1 0 0 0 0.0540837164791955 0.738201582203536 0.0252025428213471 0.610480608306679 ATGAGCCGCGGGTTCTCTCCTGCTCAGAGGTTTCTTCCTGGATCTCTAGTGAGGGTGTTTGAAAGAACTAACAGGACAGTGTTTAAGGAGACTGGAAAAGGGAGTCCTGGTGACGTGTTCCATCCAGATTCTTGTGACTGTGAGGACCAGGGATTGGGGAAGATACAGGGTCTTCCCAGAAAGGAAGAACGTCTCTGGAAAAAAGGAGAAAGAGGGCTGACGCTGCCCTGGGACCAGCAGAGCCAGAGGAGCTGTGGGCAGCTGACGGAGCCCAGCCAGAGGCCGCCCCAGGCCAAGTCTGCCTTCGGAAGGATCTGAACTTGGGCTGCTTGTCATCAAAGCAGGGCCACCTCAGAGGCACCCCAGACTTGACCGGGCTCTTCTGCTCTGGATGCCTCCGACTCTGAGGAGTCTGCGCTGAGAACCAAAGAAGTTAGGAGGCCAGAGGAGCTCCCCCCAAGAAGCTTCTTGGCCTGCTGGATCGGGCACCTGCACCCCTCGCGCCAGCTGCAGCCTCTGGTGCGGAGTTTCCTGCTCCCCTCCAGCTTGTGGCTTCAGTGCTTGATGGGGCTGCCTGTCGGTGGATCAGCTTCTGAAGCGCCCCATCGGAGCGGAGAGCCGTGGGAAGAGGTCCCGCGGCCACCACGCCTGCGTTCACCCTAAGACTAAGTTCTTTCCCAAGTCAGAAAGGGAGAGAGAGCGGAAAAACAAAAAGAGGAGAGTTCCCCCCTTCTCCTCCTCCCTCCGCGACATGTCCTCCAAGCCAGAGCCCAAGGACGCCCACCAGCTGAACGGGACTGGTCCCGCCGCCTCAGCCTGCTCTTCGGAGGGCCCGGGCCGAGAGCCCTTGGCTGGGACCTCGGAGTTCCTGGGGCCCGATGGGGCGGAGGTCGAGGTGGTGGTGCCTGAGTCTCGGGCCAACGCCAAGGGCCTCCGGGAGGAGGATGCCCTGCTGGAGAACGGCAGCCAGAGCAACGAGAGTGACGACGTCAGCTCGGACCACGGCCCCGCCGCCCCCTCCCCGCTCAAGGAGACCTCCTTCTCCATCGGGCTGCAGGTGCTGTTCCCCTTCCTCCTGGCCGGCTTCGGAACGGTGGCCGCCGGCATGGTGCTGGACATCGTGCAGCACTGGGAAGTATTCCAGAAGGTGACAGAGGTCTTCATCCTGGTGCCTGCACTGCTGGGCCTTAAGGGAAACCTGGAAATGACGCTGGCATCAAGGCTTTCCACCGCAGCCAACATCGGGCACATGGACACACCCAAGGAGCTCTGGCGGATGATCACTGGGAACATGGCCCTCATTCAGGTGCAGGCCACGGTGGTGGGCTTCCTGGCGTCCATCGCCGCCGTGGTCTTCGGCTGGATCCCTGACGGCCACTTCAGCATCCCGCACGCCTTCCTGCTCTGTGCCAGCAGTGTAGCCACAGCCTCCATTGCCTCTCTGGTCCTGGGCATGATCATGATTGGAGTCATCATTGGCTCTCGCAAGATTGGCATCAACCCAGACAATGTGGCCACGCCCATTGCTGCCAGCCTGGGTGACCTCATCACCTTGGCACTGCTCTCGGGCATCAGCTGGGGACTCTACCTGGAGCAGGGAATCTGGCAGTACATCTACCCACTGGTGTGCGCCTTCTTCGTGGCCCTGCTCCCCGTCTGGGTGATGCTGGCCCGACGGAGCCCGGCTACAAGGGAGGTGCTGTACTCGGGCTGGGAGCCCGTCATCATCGCCATGGCCATCAGCAGTGTGGGAGGCCTCATCTTGGACAAGACGGTTTCAGACCCCAACTTTGCAGGGATGGCTGTCTTCACACCGGTGATTAACGGTGTTGGGGGCAATCTGGTGGCCGTGCAGGCCAGCCGCATCTCCACCTTCCTCCACATGAACGGGACTCCAGGGGAGAACTCGGAGCAAGCCCCCCGCCGATGCCCCAGCCCTTGTACCACCTTCTTCAGCCCTGATGTGAATTCTCGCTCGGCCCGCGTGCTCTTCCTCCTCGTGGTCCCAGGACACCTGGTGTTCCTCTATACCATCAGCTGTATGCAGGGTGGGCATACCACCCTCACCCTCATCTTCATCATCTTCTACATGACAGCTGCTCTGCTCCAGGTGCTGATCCTGCTCTACATCGCAGACTGGATGGTGCACTGGATGTGGGGCCGCGGCCTGGACCCAGACAACTTCTCCATCCCGTACTTGACAGCCCTGGGGGACCTTCTCGGCACCGGGCTCCTGGCACTCAGCTTCCACGTCCTCTGGCTCATTGGGGACCGAGACACAGATGTCGGGGACTAGCCCGGTCACTCAACCTTCTGTCCACCTCTCTGCACTTTCTGTTTGAAATTTTTTGGGGGAGGGGGCGGTCTTCTTCCCTCGCCCCCACCCCACTCGACACTCCCATCTCTTTCTAGGACTTCATGTGGATACCGAATTCTCATTATTTTCAATGGGAATTTTTATACATTGAGCCAAGTTTGTAGAGTAAGAATTCAGACAAGACAGAGGGACTGAGATGAACAGTACAAGTAGGTGTTTGGGCCAGTCACCAAGTGCAGCTGCATGGTGGGTGCCTCCAGGGGAGATGCCTGGGGCAGGGGTCTCCATCCAGGATGTGGGGGCACTTGGTTTAGCTTTAGCAAACTCCAGTTCTGGTTTGGGGGGTTTGTCTTTGTTTTCTCTTTTTCTTTTTGGTTGAACAGAGGGATAAATGTCACTCTCCCCTCTCCCTACACATACGTTTTCTAGAAGTGGACCAACTTCAAAACCCTAAGCAAGAGACAGCTGCTCCTAGCCCCAAGTAATCCTAGCCCTGTTCTCTGCCCTGCTCTCCAAAAGGATGAGGTGAACTCCTTAAATTATATACCTGCTCCTTACCCAACTGCCTGATACATACCACCAGCCCCTCCCTCTGATCTTTTTTCCAACTGACTGCCTCATCCAAGAAGAAATGAGCCATGACCTGGTCTCCCTGTTGGCCCATGTCCACCCATAGGTTTGCCAAAATCGACATCCTCCCTGGACCCAGAAACCTGATTCTTCATCTCTGTTCACCTTTATCTCTAATGATTTCTAAGCACGACCTTCCCCAGAGCTTGCCGCATTGGCTTCCGAGATTAGGGACGGAGAATGGGTTTGTGGAGAAGCGCTGGGCGGTTGATGGGTGTTTCCCTGCTGCTGTTTCTCCCGATTATGATTTCTGCCATAATCACATGGCCCCTGAGAATCTCTTGCTTCCTGAAATCACTCATTCTTTCATGCCGTGGAAGTCAGTTTTCCCCTCTCTCAGCTTCTGCCCACATCCGTCTTGTATTCATTCACTCATTCAGCAAATACGCAGCTTCCCCAAGAGGCGCGATTCTGCAGGCACAGTCTGACATTCACTGAGCGCTGTTTATTGAGCGCCTACTACACGTCAGGTCCTGTGCTGGGTACTGACTGGCCAGAGGAAACACAGTCCCGCCCTTGCCTCTTTCCCTGGGTGCAAAGCCTGCGTGCCCTTTTCAGTCTAGCAGAGAAAGCGTCTTCACTGTACTCCCCTCTTTGTCCAAGCAGGGTCTGCCTCTCGACGCCGCTCCTGGCTCCCACCTGCGTGCAGCACTGGCCACAGCTCAGGCCCCATGGCTCAGCCACCACTGATTTCCCTACACTGCCTGTCTCACCCTCGCTTCCTTCCATGTCCTCACCAGTCACCTGAAAGAGGGTTCAGATCTAGAAGGCCAGACATCCACCCACTGCTTCCAGTTTACCCAGCACAGGAGTGGGAGATCGCTGGGGCCTCTGCATCCTCCCAGCACGTTACTGTGAACAGGTCAGAATTCTGCTGCCCACACTCACGTGTGGACAGACCTGGGCATTCGGATGCAGGTTTCTTCCAGCCTCTCTGTCCATAGCCTGCCCTTCAGCTGTCCCCCTCTTGTCAGCTAAAGGGCCTGTCTCCAGAGGAAGGCCAGGCAGTGACCCCGCCTCTTACCACCACCCTGCCTCACCCCAAGGAACTTGCCCTACACCTCTAGAGACTCTTTCTCTCTCTGCATTTCCACCCAGGCCACCCGCCAGAGCCTAGGCCCTTAGACTTGGAATCATAGAGGTTACCCAGCTGGGGCTTCCCCCAGCAGAGTTCACTGACACCAGCCCAGCCTTGTTCCTGCTCTTCTCAGGCCTTCTCCTATCTTGTCGTCCATCTCCAGACACGTTTGCACACAGACTCTTGTACAGGCATCAGAACCAACCCCTCCGCCCCCAAGGCTGTGCCCCTGTGGTCTGCAGTCACCCCCACCCCAGGCACTCACCCCTTTCTCCTCTCTGGAGTTCACCCAGGCTGCCCTGGAGGAGTCCGGTGTGCCCTCCTTTGCCAGAGAAGTGGGAAGGTAGGCGTGCCCCAAGCCCTGAGGATGAGCAGAGGGAGGTCTGCAGGGCGAGAGGGAAAGAAAATGAACTTCATGACTTTCATGGATGATCCATTTCTTTCCCCCCAATTGCACAAACCACGTGGATTTCTGGCCTGGCTGTGGGAGCAACATTGGTTTACTCTTATATCCTTAAAAAGTTACAGAACTGTGTCCTAAGAATTATTTATAGTGACTATAACTGAATTGACAAATGTCAACATAACTGATAAATTATATTTGGTAAAATAAAGAGGACGTTTATTTAGGTGGTTGGTGGCTCCTGTGTGTCTCATCCAAAAGCAGCTTCCCCTGCTGTCTTGGGCCTGCTCTGCGGCCCCACCCCTCCTTGCATAGAAGTGGAACGAGGCCAGAGAGTGACAAGAAACGAAATAGCTCTTAAATACAGAGATGTGTGATAGGAAACAGTCATTTCTTGAGAAGCAGCCAGTGCTGCTCTGGGGCATCCTCCCTGCTCTCCACACACTGACTCGGCCTTGGTTGGGGTGTTGGCAAAGGGCGCACCTGGGGGTTAAGAGTCCTTCCTTGCAGAGGTTTATCCCCTGCTTGGGCCACAATGACAATACCTGTATTTGTTGAGTACTCGCACTTGGCTTCACTATGCTCAGCACTGTAAGTGCTTAGAAATGTATAGTTGACTGCAAAGGGTTTAGAATCTGGCCTGGATCCAGATCTTCTAATTGTATTTGTGTGACACTGGACAAGCCGTTTACCCTCTCTGAGCTTCAGTTTCCTCATCTGTACAGACACCTAGGGTCGTTAGGAGACTCCAATAAGACAATTCACAGAAAGCAATAAGCACTGCCTGGCACACACCAAACCCCAACGTAGTAGTCATTTTTAAAGTGAAAGGGAAGTGGGCCAATCTCTAGACAATGTCAATACACTGACCATAGGGGTGAATCAGGATTAACTGGGGAGCAGGCAGGTGGAAAGAACACCCAACCAAGTCTTGAGGGTCAGGGAAGTCTTCGAGGAAGCCAGGAAGAATAGGAGAGCAGCATGAGAGGAGAGACGCGACATGGAGGAGAAATGGTGAGCTGAACAGGGCAGTGAGCCTGGCACCTTTGGGAACTACAAACAGTTCATACGACTGGAGTTTGCAGGGCAGAGAGTGATAACACAGCCTTCTGAGAGACACACATGTCTGTGACAAAGCAGTTTCTCTGAGATGGCAGGTAGGGAAGGGCAGAGTCACAGTGCAGCCCCATCCAGGCCTGACTAAAGCCTCTGCTGGGAACCACTGCCCACCCAGGACACGCCCCCCCAAAGATTCAAGACCATGTTACACAGCACACAGTGCTGAGCAGTACCCTACTCAATGATCAGCCTTCTTTTTTCCAGCTTTATTGAGATAAAATTGACAAATAAAATTGTAAGATAGTTAAAGTGTGTACTGTGATGATTTCATA EMBV3_00381 AATTCAAGCTGATGGAAGAGATCTTAACAGTCTCTGTTTCAATTGCCTGAATTCCGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39247 GGATCTGAAGAAGTTTAGGAAAATAGCAGCTGGTGACAGACTCAGGGGCCAGTACCAAGG Gene GeneID:516332|UGGT1:XM_002685231:158_cdna Constitutive 0 NULL GeneID:516332 2 GENE UGGT1 UGCGL1 UDP-glucose glycoprotein glucosyltransferase 1 EMBV3_16997 AATGGTGTCATCAGCAAGATCTGTGTGGCCATTGCTTTCCGATGCCTGGGTCTCCACCTG Gene GeneID:509175|LOC509175:XM_002693231:473_cdna Constitutive 0 NULL GeneID:509175 15 GENE LOC509175 NULL similar to Olfr571 protein EMBV3_26088 ACTCTACTTTATGACCTTACTTGGAAGGATGATGTATATCTTGGAAAAACGCTGACTCCC Gene BVV0102_059430 + 0 NULL GK000010.2:89589130-89596567 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018386 1 XLOC_009243 Coding TCONS_00018386 XLOC_009243 Coding Coding - 10:89590516-89592674 - TSS12382 1658 3 TCONS_00018386_1 95 0.919179734620024 2 0.232267037552156 0 1.10192240481655e-06 0 0 0 0 0 0 3.90223889139888e-05 0.000328081213209508 6.53833550100494e-05 0.000469382438030716 1.26640218505204e-05 0.000125168766580375 0 0.000717320502507118 0.000159949755988512 0.000291471658899738 5.40631706705822e-07 0 0 0.00112514335419969 0.000352395758107505 0.000247287963372255 0 0 0 0.000263274195133799 0.000243050491566308 0.00020242156213822 XM_005208073.1 ART3 PREDICTED: Bos taurus ADP-ribosyltransferase 3 (ART3), transcript 1e-79 302 88.94 0.139324487334138 TCONS_00018386_3 sp|Q68D85|NR3L1_HUMAN NR3L1_HUMAN Natural cytotoxicity triggering receptor 3 ligand 1; 8e-18 78.2 50.00 0.844155844155844 0 noncoding 0 0 0 0 -0.105545764950474 0.541495686772013 0.0478620144025492 0.375343053299039 GGTGACGCTTAGGAGGCTCTTATACTGGTATGATGATGCTTGGAAGGAACATCTCAGTTTTATGTTCGTTATCGGTCTTATTGTGGTCAGGAATATACTCAGGGTCGTGCACAGGCACTCAGGTGATGAACGGTGCCCCCAGCGATCTTAGCCTGGGAGGCATTCCAGAAGGTTACTCTGATTGCACCCCAGGTGGCATCAGAGGTAATGGTGAAGAGCCGGATGTTAGGGATGCCATCAGGTCTATCCCTGGTACATCCCCACCCCGTCTCGGTGGTAGAACCGAGAGGGACGAGTACGGCGCCTTCGTCAGTTAAGTGACAGATTAAGTCCGACCAGGAAAGAAAAGCTTTGGTGTAAAATCTGTCTATACCCCCATCTAGAGCAAGGAGGGATGCCTCCAGTAGAAAGATGGCACTGGTCACTTTTTTTCTCTCTTACAGATGGGCGCTAACTATTCCAGCCTCAGTCCTTTGAACTATATCCTGAAAAATGGATAGATTTGATGCCCAGGGCTTAAAGAATTTACACCTGGTCTTCCTATGTGATACTGCATGGTCATGGTATCCATTAGAGGATGGCAAACAGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTTTACCATTAGACTGGTTCTGCAGAAAACAAGGGAAATGGGTACAAATAGCATATGTGTTGCCCTTTTTTCTCTCTGTGAAATATGCCAGACTTGTGTCCTAAGGGTATAGATTTGGGTGTGACTCCTTCAGGTCCCTCCTGTCCTCCTACTTTATTAGATGAGATGGAGGACAGGAGACAAAGAGATAAAGAAAAGCAAGTTTCTCCAATCTATCCCTGGGATCATATGCACAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTTGCCTCTTCATGAAGCACCCACCGGGAGAAATAATCAGTCTATGAGAGTTAATAAGCCTTTTTCTTATTAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTACTTTATGACCTTACTTGGAAGGATGATGTATATCTTGGAAAAACGCTGACTCCCAACTCAAAAACTCATTGGAAAGTATACAACTCCATTGCTAACACTAGCAAGCGGGTACTCTTTCTACCCTCTTCTGATGTCTACGTCAGAAGCTTTCTCTATCTCTTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCTCTGGAGGCCAAGAATCCCAGCATCTTTGTATAGTTCAGCAACCTTTCACTACCTGACCCTGCTTTCATCATCCTCGAAATACCAACTCCACTTTCCATGCAGAGCTAAATTTTAAAAGTTAAAAGAGTGAAGTCACTCAGTCATGTCCGACTCTCTGCGACTTCATGGACAGTAGCCCACCAGGCTCCTCAGACCATGGGATTTTCCAGGCAAGAATACTGGAGTGGATTGCCATTTCCTTCTCCAGGGGATCTTCCTGACCCAGGGATTGAACCCAGGGCTCCTGTATTGCAGGCAGACGCTTTACCATCTGAGCCACCAGGGAAAGTTCTATTATTATTAAAGCTATGCTATATTCCACCTGA TCONS_00015367 r 5' 253 TCONS_00015367 r 5' 253 EMBV3_17928 GGGATGTCCCTCTGATTTTTGCCCTGGTGGATCATGGAGACATCTCCTTCTACAGCTTCA Gene GeneID:511091|TSEN54:XM_002696178:160_cdna Constitutive 0 NULL GeneID:511091 19 GENE TSEN54 NULL tRNA splicing endonuclease 54 homolog (S. cerevisiae) EMBV3_00647 TTGGCCGTGAATATAGCTGCCTTGCTGTCCGTCATGCTCCAGCCTTACATGCCTACAGTT Gene GeneID:512531|MARS:NM_001038091:1004_cdna Constitutive 0 NULL GeneID:512531 5 GENE MARS MGC134096 methionyl-tRNA synthetase EMBV3_33537 TTTGCTGGCACGGAAACTGCCACACAATGGAGCGGTTATATGGAAGGAGCAGTAGAGGCT Gene GeneID:281293|MAOA:NM_181014:10_cdna Constitutive 0 NULL GeneID:281293 X GENE MAOA MGC142852 monoamine oxidase A EMBV3_10696 GCCACTGTTGCTGCAGGCTTGGATGGACTTTACAGCGATGATGGTGTTTTGTCTGGTCCA Gene GeneID:538526|LGSN:XM_002685202:51_cdna Constitutive 1 NULL GeneID:538526 2 GENE LGSN GLULD1 lengsin, lens protein with glutamine synthetase domain EMBV3_20422 GTCAAAAGAAACCCTCCCAAAACAGGGAAAATTGGAGAGTATGGCTACGTGGGTCAGCCC Gene GeneID:537889|HOXA1:XM_002686862:67_cdna Constitutive 0 NULL GeneID:537889 4 GENE HOXA1 NULL homeobox A1 EMBV3_15831 ATTTGGAGACACGGACTGTAGAATGTGAAGAAGGCAGTGAAGATGACGAGTCCCTCCGAG Gene GeneID:281712|CPSF3:NM_174284:21_cdna Constitutive 0 NULL GeneID:281712 11 GENE CPSF3 MGC128926 cleavage and polyadenylation specific factor 3, 73kDa EMBV3_12175 CCTATACATGCGACATCTGCCACAAAGCCTTCCGGAGGCAAGACCACCTACGAGACCACA Gene GeneID:539430|OSR1:NM_001076916:195_cdna UTR3_Alt 2 NULL GeneID:539430 11 GENE OSR1 MGC142539 odd-skipped related 1 EMBV3_21600 TCTCGATATTGGTCAGCCCAATTTGGTGATTGTACCACTCCACGATGAGTTCTTCCAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36024 GTTGGGCAAGAGTGCATACGTGGGTAGGGCAAATGTACACAGAATCTGGCCTCTATTTGA Gene BVT0102_051385 - 0 NULL GK000007.2:41900670-41934326 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216701 TCONS_00216703 TCONS_00216705 TCONS_00216706 TCONS_00216702 TCONS_00216704 TCONS_00216707 1 XLOC_131299 Coding TCONS_00216704 XLOC_131299 Coding Coding ZNF496 7:41931225-41978094 j TSS161554 5378 1 TCONS_00216704_6 580 0.132019338043882 10 0.885465562857387 0.000327519436875364 0.000293243472962649 2.98945541924088e-08 6.48791015107782e-05 0.000339649928169996 0.000126208794986825 5.59456762974327e-11 0.000121988190200975 3.92708927705446e-05 4.05511693718176e-19 5.64466742687567e-11 1.49785204348598e-10 2.83859503374033e-05 0.000152471013323052 3.71776273374574e-09 0.00489918979677284 0.00223455418816317 5.15588662861689e-05 3.29768626132694e-08 2.61000226105735e-06 1.32120431445525e-06 0.00157727230514458 2.80117790352781e-13 0.00244832631274805 0.000341132135907784 0.00013258303004297 0.000200806623646644 0.000183153801552079 1.09120910775668e-16 0.000140794745893854 XM_005209230.1 ZNF496 PREDICTED: Bos taurus zinc finger protein 496 (ZNF496), transcript 0.0 8967 100.00 0.924321309036817 XM_005273330.1 ZNF496 PREDICTED: Homo sapiens zinc finger protein 496 (ZNF496), 0.0 2484 83.85 0.42339159538862 TCONS_00216704_6 sp|Q96IT1|ZN496_HUMAN ZN496_HUMAN Zinc finger protein 496; 0.0 946 82.82 0.998275862068966 5 coding 0 1 1 1 -0.205750950692786 0.197117838000679 -0.015798322137951 0.763761453780086 ACTGAGATGCGGAGACCTCCCCGGTCCTAGAGCGGAGCAGGAAGTGTCCCAGGGGAGGGAGCCGGAGGGCTTCGGCCTTTCCTTTCCTCAGCGTCCGGCGGGCTCCGGAGGCGGTCAGGCCTGTACGGCCCGCCAACTGGGACTCGGCGAGGAGGCGCCTGCATTTGATCCCACTTCTTCCCTCTTAAGCGGAGCCGTGGTTTTCTGGATGAGCAGGAAACAGGATCTTGGCTAGCCAGGGACAGAGTGGCCCTCGCAGAGAACCCGCCTCAGGAAGGACACCCGGGAGACCGGGCTGGAAGGATGAGGAGCTGCCGCTGTAGACTTCCGCCGCAGGAGGGCTTTGAGGTAGACGCTGAGAAGGAGTTCCATGCTGTGAGCTCATTTTGTAAAGGTCTCAAGGGCAAGGACGGTGACTTTGGCTCTGAAGCCTCAAGATAGCGGCCTTCTCAGCTCGTCCATTTCAGGTCCCTTCCAGGAGGACCTGGCCATCGAAGGGTCGTCTTCTGCTGCTGACCCCCATCAAATCCCATCATGCCCACAGCCCTGTGCCCCCGAGTCTTGGCTCCAAAGGAAAGTGAGGAGCCCAGGAAAATGAGGAGCCCACCGGGAGAGAACCCTTCCTCCCAGGGTGAGCTTCCCAATCCCGAGTCCTCCCGCCGCCTCTTCCGACGTTTCTGCTACCAGGAGGCTGCAGGCCCCCGGGAGGCCCTACACCGCCTCTGGGACCTATGCCGGGGCTGGCTGCGACCTGAAAGGCACACCAAGGAGCAAATCCTGGAGCTGCTGGTGCTGGAGCAGTTCTTGGCCATCCTGCCCCGGGAGGTCCAGGGCTGGGTGCGGGCCCAGGAACCTGAGAGTGGTGATCAGGCTGTGTCTGCTGTGGAGGCCCTGGAACGAGAGCCAGGGAGACCCTGGCAATGGCTCAAGCACTGTGAAGACCCTGTGGTGATTGACGATGGGGACAGCCCTCCAGACCAAGAGCAAGAGCAGCTGCCAGCAGAGCCCCACAGTGACCTTGCAAAGAGCCAGGATGCCCAGCCCATAGCTCTGGCTCAGAGCCCTGGGCTTCCAAGCAGGCTCTCAGGCCAGCTCAGCGGGGACCCAGTCCTGCAAGACACTTCCATTCTTCAGGAAGCGAGTTTGAGGGATGCACAGCAGGTGACTACCTTCCAGCTACCCCCGGATATGATCTTCTGCTTCTCAGAAGAGGACTGGTCCCTTCTAGACCCTGCCCAGACTGGCTTCTACGGAGAGTTCATCATTGGAGAAGACTGTGGGGTCTCACTGCCTCCAAATGATGCAGCTGCTCAGCTGGATCTCTCCCAGGGAGAAGAGAATGAGCCACGTGTTCCAGAGTTGCAGGACTTCCAGGGGAAGGACGTGTCCCAGGTCTCCTACTTGGACTTTCCAAGTCTCCAGCCATTCCAGGTAGAAGAAAGAAGAAAGCGGGATGAGCTGCAGGTGCCAGAGTTCCAGACAAGCCAGCAGACAGTGCTCCCTCAAAGCACCTGCCCAGTGGGAGGTGATGCACCATTCCCCGAGAATAGCCTGGATGAGGAGGTGACAATCGAGATTGTGCTGTCCAGCTCTGGAGATGAGGACTCCCAGCTTGGCCCCTACTGCACAGACGAGCCGCGGAGCCCCACAGAGAAGCAGCACAGCCTCCCCATCTCCCACCGGAGCGGCATTGAGGCAGCGGGTGAGGTGCAGACCTCCTCTAAAAAGTCCTACGTGTGCCCTAACTGTGGCAAAATCTTCCGCTGGAGGGTCAACTTCATCCGACACCTGCGGAGCCGCAGAGAGCAGGAGAAGCCACACGAGTGCTCGGTGTGCGGGGAGCTGTTCAGTGACAGCGAGGACCTAGATGGGCACCTGGAGACCCACGAGGTCCAGAAACCTTTTAGGTGCGGTGCTTGTGGGAAGAGCTTCCGCCTCAACTCCCACCTGCTCTCACACAGGCGGATACACTTGCAGCCAGACGGACTAGAGTTAGTGAAGAAGAAAGAACAGGAGGCGTCAGGGACCACGGGTGGGGATTCCGACGACCTGCTGACAAAGGGCAAGGCCAAGCTGCGCTGCCAGTGCTGTGATTGCGGGAAGGTGTTCCAGCGGCCTGAGCACCTGGCCCGGCACCGCAGTAACATTCACATGGACAAGTCCCAGCCCTTTCAGTGCAGGTACTGCGTCAAAAGCTTTTCCCAGAACTCTGACCTCCTCCGCCACCAGCGCCTGCACATGAAGCGCCGGTCCAAGCAGGCTCTGAACTCCTACTGAGTCGGGGGCTTAGCACACATTTTTGCGTGCAGCTCCAGCGTGGGTAGAGTGTATCCCACTTGTGCTTGGTACTGACTGGTTTCAGACTCCCCCAGGACAGAGACCACGTCCTCCTGACCTTTAACTCTCAGGTAGAAACGAGATAGTGGCCAGTTAAGTATTTGCTCTGTCTCTGCTGTGCCGAAAACCAGGAGAGTGTGTCAGCACCAGCTTTGACTTGCCCGGTGTTTCGGGTCTAAGAGAACCCTGTTCAGTGCTTCCCACCTGGTGAAGGGACTGGGGTACCCCCTACCACAGGAAACCTTTGAGGGGTCTGTCCCTTGCCAGCTTGCAGTGTACTCCCTTCCTGCCCTGTCTGAATTCCTACCCCATCCTGACGTCTGGAGGTAATTTCTTCCTACCTGACAGCAGGAAGCTGCAGGTGGGGTGATAGGTTAGGAGGAAGACAGTAAGGTGGGGCTGGACCTGTTGGCACAAGGGCAGCAGGGCCAAGCACACCAAGCCATGTCACGTCATCAGAAGTCTGTGTCCCAGGCACCATCTGGTCCATAAGAACACCTCAGAATGATCAGATGGCCCTTCCAGGCTCAGAAGCCTTTGTGGGGGACTTTATAGCTTGCCAAAGGGAAGTCTTTCTTTTATGGTGGTGACTGGTTATTGGGAATTGTGAGCTCATTCATGGCAAAGCCCACGTTAAAGCCCACATTTTAATTTGTTTGTTGGCACACACTACAAAGAAAGTGTCCTTTCTTTGTACCTTGAAGGTCCTTGGTATACTCGGTTGTGGGATAGAAGTGACAGCACCATCATTTGAAAGGCGCTTAACTTTCCCTTCCCCATTGTGTCATGTCTAGGAAAGGAGAGCTCACTCAGGTCCCGTAAAGGAGAGCTCAGGTCCCATGAATGAGAAGTTCTTGTGTCTGGATGAGCTGAGCAGGAGAAACATAACTTTTGGTGAAGTCATTCTATATATATATTAACTTCGTGTGCCAGTTGTATTAATTCCTTAAGGCTGCTGTAACAAAGTTAAAAGCTGGGTGGCTCAGAACAACAGAAATTCATCATTTCAGTTCTGGAGGCCTGGAGTCCAAGATCAAGGTGTCAGCAAGGTTGGATTCTTGTAAAGGAAGGATCTGTTCCTTGCCTCTCCTTTAGCTTCAGTGATTGCTGACAATTGTTGATGTTCTTTGTCTTGTTGAAGCATCACCCCATCTTCTCTGTCTTTACATGGTGTTCCTGTGTATGTGTCTGTCTCCAAATTTCCCCTTTTTGTAAAGATACCAGTCATATGGAGTAGGGCCTGCCCTACTGATTCCAGACTGTTCCCATCTTAATTATATCTGCAATGACCCTATTTCCAAATAAGTTCACATTCTGAGGTACTGGGGTTAGGACTTCAATATGAATTTGGGGGATGGGAAGACAATTTAACCCACAATACTAGATAATCCTGAGGTTCTGCTGATATTTCTCATTCTCAAATGAATTAGTACAAAGTTGATTTAGCTTACTCTGAGTTCCATTGGAAGCAGAACTCAGATTCAAGATTCTGTTCCCAGAGTTGGGGATCCTCTGCAGGATAGCCTTTAAAGTTCGTAGCCTGGGGTTCTGGACTGGGAGTGACACTGGTAGTGAAGCCTCAAGCAATGAAAACCATCGTCTTGATCCTGAAAGACTGGCCAGGTTGGCTCAGCTCAGTGATGAAAAAGCATGGAAGCTGTGGTGTATCGATGACTGACTCAGAAAGCCGGCCACCAGGCCTGTGTTTTATATTTATATGTCAGGTCCCATTAGCAGGCAGTAAGGCCGGGCAAATGAATGCAAGACCCTTTGCTCTTTGTCACTTCATTACCACATCAAGAGATAACAAAGCCAATGGAATAGTAACAGTTTTACAGTTATGAGTTCTGTGCCTGTGTAGATGCATCTATATACCCAGGAACAGTAAATACAATAAAATAATTTGGTTATACCCTGAACAAGAAATAAACTATTGGGGCTCTTTGTTTTCTAAATAGTTTCCCTCTTGGGTTGACCTTGCCAGAAAAGGGGAAAATATGTATCTTGAAGGACAAGGGAAGAGAAAATTTCAAATAGAGGCCAGATTCTGTGTACATTTGCCCTACCCACGTATGCACTCTTGCCCAACAGTCCCATTAAGGGAGGAAGTTATGAACTCACCCACTTTAGATATTTGTATAAAAGAAGAAAACTGGTCTATTTAGTATATTTTATCTGTAAAATCAGATCATAAGTAAGAAAGACAAAAGGGGGTGTAACAGAATTGAAACCCATGGGGAGGCTATATATCTTATCAGTACCCACCAGATATTGTGAGGGAGTATCAAATTCACTGACTCAGACCTGACCAGGGTACCTAGCTAATCAGAAGTTCACCTTCCCCCTGGATTCAGAAGCCCCTCTGGATGGTGCAGCTCAAATCCTAGGTTCTTCCCATGCAGAGGAACCATTGGGTTCTGGAAAAAGCTTCTCCAGAAGATAGAACCGACTCACTTCATCCTTCCTCCCCTCCCTTCCTGGGTGGCTGGGCAGACAGATGAACTGTGTGTGTACCTTCCCGTGGATGTGCAGACCCCACATCCAAAAAGTATCTGTCCTCCCCCTTCCTCTGATCCCTTGGCATTGTTCCCATAAATTCACAGGTGCAAAATAAAAATTTGACTTGCTGAATTAATATTCGTGTTTGACTTTTCAATTAAAACAGTATGAGTAGCACAGCTGAGAGAGCTCATCAGTTGGCCTGACAAAGAGAACTTGAGGGCTCCCTGGTGTCTCAGTGGTAGAGTCCGCCTGCCAATGCAGGAGTCTCGGGTTCAGTCTCTGATCTGGATGATCCCACATGCCACAGCGCAACTAAGCCTGTGCACCACAACCACTGAGCCTGTGCTCTGGAGCCCGTGCTCCACAGTAAGAGAAGCCACCGTAATGAGAACCCTGAGCGCCACAACTAGAGAGCAGTCCCTGCTCGCCACAGCTAGAGAAGGCCTATACAAAGCAAGGAAAACCAGCACAGTGAAATAAATATAAGTTTTAGAAAAGAACTTGAAGTGGGAGGATGCTGAAAATAGCCCTTCTGGATG EMBV3_40330 AGCTGCTGAATGTCAAGGGGAGTGAAGTAAGGTTAATAAAGGCCAGTGGGGACATCACAG Gene BVT0102_384777 + 0 NULL GK000002.2:132600989-132601299 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106912 TCONS_00106911 TCONS_00106913 1 XLOC_062933 Coding TCONS_00106911 XLOC_062933 Coding Coding PINK1 2:132600895-132615933 j TSS78592 3024 1 TCONS_00106911_4 469 0.102513227513228 8 0.799428077409058 0.0036790971686844 0.00529669560492914 0.00266915376769974 0.00293064738416726 0.00356236452589382 0.000981792764853928 0.00163783618277682 0.00188579366418461 0.0010374004191282 0.000743497531845364 0.000180518508006542 0.000290876885038705 0.000599098748484169 0.00165682415043783 0.000553236122477675 0.0155506968524832 0.00859545090791066 0.0063909732260248 0.00109147703010254 0.00206546117511306 0.00177880991742596 0.00587339674526456 0.00315538896077145 0.00513521011828527 0.00333935728041557 0.00307102916938641 0.00479150016387335 0.00100659107306527 0.000605041205435855 0.00378898140765793 NM_001099701.2 PINK1 Bos taurus PTEN induced putative kinase 1 (PINK1), mRNA. 0.0 4518 99.53 0.837962962962963 NM_032409.2 PINK1 Homo sapiens PTEN induced putative kinase 1 (PINK1), mRNA. 0.0 1577 84.44 0.473875661375661 TCONS_00106911_4 sp|Q9BXM7|PINK1_HUMAN PINK1_HUMAN Serine/threonine-protein kinase PINK1, mitochondrial; 0.0 751 86.31 0.961620469083156 2 coding 0 0 0 0 0.0360047104845481 0.862691846539201 -0.00152138282356599 0.97894475586845 GACTCCCTGCCCAGTAGTGAAGATTGCTGCCGGGTCCTGCCTGCTGCACATGGTGGGGTGTTGCTCGAGGACCTTTTTCTGCAGACATGCAATTTTCACCCAGAAAAACAAGCTGCTCCCAGACCCACTGGACACCCGACGCTGGCAGGGTTTCCGGCTGGAGGAGTATCTGATCGGGCAGTCCATTGGCAAGGGCTGCAGTGCCGCCGTCTATGAGGCCGCCATGCCTGTGTTGCCCCAGAGCCTGGAGGAGGCAGAGAGCCTGGGCCAGCTTCTTCCAGGGAAGGGCCCAGAGATCCTTCCACGAGGAGAGGAGGCGCCAGCCCCACGGGCCCCGGCCTTCCCCTTGGCCATCAAGATGATGTGGAACATCTCGGCAGGCTCATCCAGCGAAGCCATCTTTAGCACAATGAGCCAGGAGCTGGTCCCAGCCAGTCGAGTGGCCTTGGCCGGGGAGTATGGAGCGGTCACTGACAGAAGACCCAAGGGAGGTCCCAAGCAGCTGGCCCCGCACCCCAACATCATCCGGGTCTTGCGAGCCTTCACCTCGTCGGTGCCGCTGCTGCCAGGGGCCCTGGTCGACTACCCGGACGTGCTGCCCCCGCGTCTTCACCCCGCAGGCCTGGGCCATGGGCGGACTCTCTTCCTCGTCATGAAGAACTACCCGTGTACCCTGCGCCAGTACCTTCGCGGGAACACCCCGAGCCCCCGGCTGGCCACTGTGATGACTCTGCAACTCTTGGAAGGGGTGGATCACCTGGTCCAGCAGGGCGTCGCGCACAGAGACTTGAAGTCCGACAACATCCTGGTGGAACTGGATGCAGATGGCTGCCCCTGGTTGGTGATCACAGACTTTGGCTGCTGCCTAGCTGATGAGCGCGTCGGCCTGCAGTTGCCTTTCACCAGCTGGTACGTGGACCGTGGCGGGAATGGCTGCCTGATGGCTCCCGAGGTGTCCACGGCCTGCCCAGGCCCCAGGGCAGTGATCGACTACAGCAAGGCAGATGCCTGGGCGGTGGGCGCACTCGCCTACGAAATCTTCGGGCTCCCCAATCCCTTTTACGGCCAGGGCAGGGCCCACCTTGAAAGCCGCAGTTACCAGGAGGCTCAGCTGCCAGCACTGCCCGAGTGGGTGCCGCGGGATGTGAGGTGCCTGGTGAGGTTGCTGCTGCAGCGGGAGGTCTGCAAGAGGCCATCCGCCCGAGTGGCTGCTAATGTGCTTCATTTAAGCCTCTGGGGTGAACACACGCTCGCCCCAAAGAACCTGAAACTAGACAAGATGATTGCCTGGCTCCTCCAACAATCGGCCGCCACGCTGCTGGCCAACAGGCTGACGGAGAAGAACTGTGTGGAAACAAAAATGAAGATGCTATTTCTGGCCAACCTGGAGTATGAAGCGCTGAGCCAGGCGGCCCTCCTCCTCGACTCCTGGAGGGCAGCCCCGAGACAGCTGCTGTAGCTGGTGAATCACTAAAAGAACTTTCCAGCATCTGTGTCGTGATGGTCTGTGAACGCTGAGCGAGTGCCTCCTAGGTGAGGGGGCGGGGGTGAGGAGGAAGGACGGCATGGCGAGGGCGAGTCAGCCAAGAGAAGGCCTCAGGTTTGGCAGATGAAGGAGCAGCTCAAGGTCACGGTCTAGCCACTAACTCGCTCTAGCTGTGTGGCTTTGTCTAGCTGTGTGATTCTGATGCATCATCCAAGTTCTCTTACCTGTGAAATGAAGACACCGCTCTCGAGAGAGGTCAGCAAACTTCTGTCGAGGGCTGGTGCTCAGGCTGTCGCAGCTGCTCAGCTCTGCCATCGTGGTGCAAAGACAGCCTTCAATGTGTGAACAAGTTCAGCTTCACTTAGGGACCCTGAGATTTGGAATTTCGTGTGTCACTATTTACTCTTAATTTTTTCAACCACTTAAAAGGTAAAAACCATTTTTAGCTTGCAGGCCTGCAAAAATCAGGCAGCAAGCCAGACCGGCCCACAGACCAAGTTTGCCAACCCCTTGTCTAGATGACCGCAAAGGGCCTAACCCTCAAGAGAAATGCTAGCCAATCACCAGGCTCCTTTGTGTTTCGGCGCTGACCACGTGACCAGCCCTGGGCACACAGATCCAAAGGATGGGCTCTGTCCCAGGCGAGAGGCTGCTCGGGCGTAAACCACTGACCCGAGTCCTGTCCTCCTAGACCTCTGAAAAGTCAGTGGCCGAGCGGGTCTGTTAGGTGAGGCTGAGCTGAGAGGTCAGACCGGTGTTGTGGCCAGAGTTCACGCAGGTCAGGATAGTCAGGTGTCAGAGTGAACAGCCCGTGAGTGAGGCCCGAGACGGGAGCCGCTGCCGTCAGTCAGTCGTCTGTCCCGGAGCAGCCCGGGGTGCTGGTGACGCGCATCGCCGTGGGGCTCGTGCAGCCGCTGACTTGAGTCCAGCAGAGCGCCGGTGATTGAGGACATGGAGATTAGCAGTGCAGTGTTCTGAACCTGCTGACTGTCCCTTCTGACTAGCATTTCTTACAGGAACTGTGACGAATTAAATGCATGTTGACAACTGCAAAATATGTAAGTGCCTCAAATGGAATACTTGGCTTGTAAGAGTAATCCTCACACTATAAAGACAATCATACTGGAGACGGAATCATACATCTTTACGTGTGCTTTTTAGGAACACAGCTAGGGCCTAAAGCAAGTTGAATATGCTGTAAGGTTCTTTTCAACCAAGCAGTTCTATAATTCTATTAAAGTCCAGTGCTGTTACCCTAGCTTTCCCATCTCTGTGATGTCCCCACTGGCCTTTATTAACCTTACTTCACTCCCCTTGACATTCAGCAGCTGTGTCATTTCCAGACTTCAGCAAAACTAAAAAGGGCCACTTACTACTTTGTACCCGTCATTTCTCAACAGCATCCCCCTGCCCCATCAGCAAAGTACAACAGGGGTCAGATGAAATGTGAGGGCCATGTTTCTCTTTATTTTAGAAATAAGAGTTGACGTCACATATGAAAAAATACACAGCGTTAAAGGTGGAAAAACAAATTATTC EMBV3_32727 GCCATCGAAGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAATATCCAGCAGCG Gene GeneID:508615|RBM18:NM_001034324:87_cdna Constitutive 0 NULL GeneID:508615 11 GENE RBM18 MGC127807 RNA binding motif protein 18 EMBV3_21477 TACCGGGGCATCTTCAGCAGGTCTGCCACCCCATCTTCCTCTGCAAAGTACTCAGGGAAA Gene GeneID:515398|PCSK7:XM_002692999:178_cdna Constitutive 1 NULL GeneID:515398 15 GENE PCSK7 NULL proprotein convertase subtilisin/kexin type 7 EMBV3_06691 AGAGAACGAAGAGTTTGTGGAAGTGGGAAGGTTGGGGCCTTCAGACTACTTCGGCGAGAT Gene GeneID:615074|PRKAR1A:NM_001076358:25_cdna Constitutive 0 NULL GeneID:615074 19 GENE PRKAR1A NULL protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) EMBV3_10249 ATGGGGAAAGGAAAGAGGCAGAGATAAGTGATTTTCTGAATGATCCTGCTTCTTTTTCTA Variant GeneID:515338|ACACB:XM_002694538:486_cdna 112^171 1 EMBV3_06044 GeneID:515338 17 GENE ACACB NULL acetyl-Coenzyme A carboxylase beta EMBV3_22474 GGCAGTGATAGCAGGAGTGGAATAAGAATATTGAAAAGGCCGGGAAGAAATGGCATTCCC Gene BVT0101_011830 + 0 NULL GK000010.2:62489655-62863668 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017513 TCONS_00017508 TCONS_00017510 TCONS_00017514 TCONS_00017515 TCONS_00017512 TCONS_00017511 TCONS_00017509 1 XLOC_009053 NonCoding TCONS_00017508 XLOC_009053 NonCoding NonCoding - 10:62653136-62661712 - TSS11949 663 1 TCONS_00017508_1 51 0.0874811463046757 5 0.923265306122449 0.000398516422465486 0.000654788846723084 0.000544120879016479 0.000595980693616037 0.000271320473247666 2.2951098817025e-205 2.08815220270695e-78 0.00177152546823473 0.000176021541884012 9.76785128176307e-05 0 0 9.98682812896468e-111 0.000168229508583562 3.96152213612293e-05 0 0 0 0.000139068643735209 0.000153055735099102 8.05454390102423e-06 0 0 0 0.000505876840255784 0.000384897268930812 0.000237703483733578 0 0 0 0 noncoding 0 0 0 0 -0.0813462948237081 0.556321625005257 0.0103583462270161 0.835886718261656 AAGACAGCAGAGGCTTGCTCTGTGCACCTCGCAGGTCCACCCCTCCTTCATTGTCTGGCCATGTTCTGAACAAGAGGCAGATGGCTGTACTTTAAGGCCAGCTAGAAGAAACCCCAAAATACCCAGGCCAGGATTCAGGCAGATAACTGGTTTGACTCTAAGTCCATGCTCTTTCCACTGAGCCATTTTTTCAAGGCCTTATTCACAAAAGTTTACTCAGTAAAAGACATAAGACACGTGTGTAAAGAACAGAATGAAGTCTGAGCAAGGTTGACCATGGACCACATTTTGAGAAACGTTTGGTTGGGCAATAACATTGGACAAATAAGTGGAAGGAAAGACAAAGAAAGAGGAAAAAAATACAGGCTATGAAGCAGAACACAGTGGCTGGGTGATGATCAGGAACCACAGAGAAGATGACTTATCCCTGAACTTTCCAGGCCTTGAACTTGAGAAAGATTGGCAGTGATAGCAGGAGTGGAATAAGAATATTGAAAAGGCCGGGAAGAAATGGCATTCCCACGGTGCCAGCACTTCTGGGAAGAGATAAGAAACCCTTCTTTTCAAACCTCCAGCTTCTTCATTGACAACTACCATTGTCCCAGCAATTCCGAAAGCCAAAACCAGCCTTCTTCTCACCTCCACTCAAGCACAGCCTCCAGT TCONS_00017505 TCONS_00017506 s 5' 163483 TCONS_00017505 TCONS_00017506 s 5' 163621 EMBV3_18601 TTCAGCAAGTAGGGAGCCGAGTGGAAAGACTGTCAAGCAGGATGATGGAAGCACAGAGCT Gene BVT0101_045371 - 1 EMBV3_38171 GK000019.2:35787199-35816340 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41378 ACAGTGATCTGACTGGAAACCTGCTACATGAGAATCCTTCTAACCTTTCTGCAATGAGAC Gene GeneID:512856|SLC26A3:NM_001083676:48_cdna Constitutive 0 NULL GeneID:512856 4 GENE SLC26A3 MGC151902 solute carrier family 26, member 3 EMBV3_37802 GGCCAGGACCCAAACGTGTTGATTTGTCTATTAGTTGCTATTGCCTTGGTCATATTTGCT Gene BVV0101_022787 + 0 NULL GK000029.2:12712647-12798690 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163128 TCONS_00163135 TCONS_00163123 TCONS_00163125 TCONS_00163124 TCONS_00163134 TCONS_00163133 TCONS_00163131 TCONS_00163126 TCONS_00163132 TCONS_00163129 TCONS_00163127 1 XLOC_099810 Coding TCONS_00163132 XLOC_099810 Coding Coding RAB30 29:12692832-12761294 j TSS122323 9181 1 TCONS_00163132_2 203 0.0635007079838797 6 0.865982091993982 1.21333438102711e-15 1.21376580915321e-08 3.98027492441403e-21 0.00029263031567111 0.000471313140377706 9.17171292802152e-22 2.77503423844037e-11 0.000281208380957152 0.000665072969623035 2.31824988085596e-38 1.79400850343356e-69 1.01515889371815e-41 4.16561595721709e-05 1.20910756072775e-12 3.7521007787354e-05 1.29567807858804e-11 9.42477374190499e-54 1.68886129664561e-51 9.09942869770245e-19 0.000573271669412979 5.44043715746933e-06 6.08126712699327e-24 5.32975730237186e-31 2.06381998330669e-16 0.000188298995355133 0.000728309349394422 4.36276204409478e-05 1.64867830571072e-23 3.89089747067977e-20 8.78910811087845e-26 XM_005226715.1 RAB30 PREDICTED: Bos taurus RAB30, member RAS oncogene family (RAB30), 0.0 1.605e+04 100.00 0.969502232872236 XM_005273911.1 RAB30 PREDICTED: Homo sapiens RAB30, member RAS oncogene family (RAB30), 0.0 3923 80.58 0.464328504520205 TCONS_00163132_2 sp|Q17QB7|RAB30_BOVIN RAB30_BOVIN Ras-related protein Rab-30; 3e-150 420 100.00 0.995073891625616 5 coding 1 0 1 0 -0.186514201984398 0.603667121364748 -0.0481562201234568 0.556012932539769 GGCTGCCGTGAGGTATGTGGGCCTGTGGAACAGAGCCTGAAGAAAGGAGCTGTCGGGTTCTACAGGCACTGGTGTCACAGGTACACCGTCGAGGTGGTGGCCTTCTCCTTCATATGCGAAGTGTCAACAGAGCCCACAGTCCGTGGGAAGCAACCCTGTTAGCCTTCCCAGAGTCACGATTCTGAGGAGCGCTTGGAAGAACTGAAAGTCTCTAGCCCTTCCTCCCAGAGGCACTCACGGCATCTACGTAAACCACCTGTCAGCTTTGCATGGGCTCCGCTTCGCTCCGCTTCCTTGCACCCCCAGCTTGCCTGCTCAGAGATTCATAATCTCCTTTTTGTGGCTAAAAGAAAACAGCTGACCACAGGAGCGACCTGCGACCTGACTGTTTGGAAGAGTAAAGGTTACCAGCTGTGTAAATGAGTATGGAAGATTATGATTTCCTGTTTAAAATTGTTTTAATCGGCAATGCTGGTGTGGGGAAGACGTGCCTAGTCCGACGGTTCACTCAGGGTCTTTTCCCCCCAGGACAAGGAGCCACAATTGGAGTTGATTTTATGATTAAGACAGTGGAGATTAATGGTGAAAAAGTAAAGCTTCAGATCTGGGACACAGCAGGTCAAGAGAGATTTCGGTCCATCACCCAGAGTTATTACCGAAGCGCCAATGCCTTGATCCTTACCTATGACATAACCTGTGAGGAATCCTTCCGTTGCCTTCCTGAGTGGCTGCGGGAGATAGAACAATATGCTAGCAACAAGGTCATCACTGTGCTAGTGGGCAACAAGATTGATCTGGCTGAAAGGAGAGAGGTCTCCCAGCAGAGAGCCGAAGAATTCTCAGAAGCTCAGGACATGTATTATCTGGAGACCTCAGCCAAGGAATCCGATAACGTGGAGAAACTCTTCCTTGACTTGGCTTGCCGCCTCATCAGTGAAGCCAGGCAGAACACCCTGGTGAACAATGTATCCTCACCCTTACCTGGAGAAGGGAAAAGTATCAGCTATTTGACTTGTTGTAATTTCAACTAAAGGCTGAGGCAAGGCGAGGCGAGAGGAATCCGCAGCTGCCCTGATGGGCCACCAGTTGCTGGGGAGACCTGGCGATGACTGTGGCTCCCGCTCTGGGACCTTCTGACTCCTGTGGGCTCCCGAGCTTACAAAGCACGGCGGGCCAGGGCCTCATCCGCAGGCCAGCATTCGCGGAACATATAATGGTTTCACCCTTTTGCAGTCTGGAGTCGGGTCAAGGAGAAAATTGCACTAGGTGCTCCATGATCTGCAGAGCATGTTGCTTTTGTTTTTTTAAACAAGCAAGTAAAACGCATTCCTGAACACGGTCCAGGGGGAAACGTACCGTAGGGACCCCTCCTGCACGTCAGTGGCTGCATGTGGGGGCTGCTCTTTAGGGCTTCTGGGGGCCCTGGTTTTCTTGTCTACCAGAGAAACCAAAACCAGGAAGGCCAAGTCCTGTCTCTGTGGTGCGTGTGGATGACTCCATGGAGATTTTGACAAGTGTTATTTCTCTTTTTTCCACGGGCACTTTCAAGAACTTTGGGATGTAATAGTGAGATGAAACCTTTACCCATGACAACAGTAACAATCATTGTTTTAATACTGTACACAACAAGCTCCACAACTCCTTCTGGTGCTAATGATTCTGCTCTTTCACAGACCAAACATTTTAGTACATCGATGTCCTTACATACCTTACATAGAAATAAAGCAAAAATTAAGGGAAGTCCATGAATCAGCTCTCTTTCTTGAAGTTTCATTATGACCTGTCCTAGGATAGATTTATTGGAAAAGAGAATACTTTTCCTTTCCTCTTGCCCTCTAAGTCTCTACCATTTTCTTCTTCCATTCTCCCATCTTTCCTGCCTCTCAAGTAAATGAAAAAGTTTGAAAAATGAAAAAAAAAAAAAAATAGAATGGTTGACACCCCCATATAAGAGATTATCTCTAAGACATTATGAGTAGTATGAAAAACCAGACCTGATCTGACCAAAATACTGTGGATTAATGGACTGCAGTGCGGAGTTTCAAGCAGAGCACAGTCCTTGATAGCAAGTCTCGTCTTTTGCTTCCTGGTACTATCCATCTTGGACAGACCAACGCTTAGGATTTTGTAGATGTTTTTAGTATGGTAAGTGAGAGTTGCAGTGGATGAAAAGTCTCACGAACCATTTTTGTATCTGCAGTGATAACCTTAGAAAAAAAATCTGCTTGTGGAAGCAGATGGAGTAGTCATTTGTCATCTCCTTGTAGTTATGTTACTCTCAGACTCATGACCAGTCATTCTTTCCGATATCTTTTTCTTTTCCTCGCTTTCTTTCCCGATTTTCCCCTTTTTACCTTATCCCTCTCCTCCCCACCCTTCCTTGTATGCATATGTTCCTGCAAATCTCCAATTCAGATGGAGGTGTGTATGCCTTTACTTAGCCAATTTAAAAAACAGAACTCAAATGGAAGCCGTGATGCTGAATGTGTGTTGCTGTTTCTTCAGTGCCATGCTTCCAATTTGTTCACGGATATAAATGCAAATTGGGACAATGATTAAAGCTGTTTGCTGCTGATGCTGTCACATGTTTCAGTAGCTTGCTGCTTAGCATAACTGAGGGATGAGTCATGGGATTAGGATATGATAGGTAATTCCACTGTTGTTGTAGATGGTGGCAGTCTTGGTCCTGATACACTGATGTGTGAAAGCTATTGAATTTTAAAGCAACGAGTCATGTACAGACACAATATTGGTGAAGCCTTTCTAGCATTTCTAGGGCAGGTTTCAGAATGACCTGTCACTTGCACATGGGAACTGTACATATTGTTTAAGGGACTGAGGCTATAGTTGGCTTCACCATGGTTGTCCTGATACTGTGGGTAAGAAAAAGGGATCCCAGAAGTTTGAGTTGCTTTTATTTCAGAATCTATCTCTATAGGAAAGAAAATAATTTTCATAAACACCAACCAAAATAACTTATTGTGGTTGCCTTTCCCTCTCCATCTTCCTCATCAAGCCAGCAAATAAAAGGTATTCAGAAAAGTTGATCAAGGTGAGCAGAAGAGCTCTTTTTACATGGTGAGGAAATGCCCTTAAGTTTAGGTCTCATTTAGAGCAAAATCCAAAGTCCCCAGTACATCATGACCCAACTTTGTTTCATAGCAGCAAGTATGTTGAAAATAAAGTTGCTTTATGAAATAGAGGCTAGAATACTGTTAGATTGGACACAATAGTTGTAAAATAGCAGGCTGTAGGGCCACTCTTGCGTTCTGAGATTATTTCTTAGGAAACAGTCTCCTTTATATACTCTTGGCTGAACTTTAAGGGGATTAGAAGGCTCTGCTCTTGGCCGCTTTCCTCCTTTATTCCTTGCAGCCTTTCTGTACTTAACTGTCACCCGTCTACACCACATCAGCTGGGACATATGAGAATGTAGGGCTTTGTTTCTTTTTTTTCTCTCTTAGCTGTATGAATTCTAGATTAGGCCTATGGACACTTGTTCCCTAATGTATCTAAGTTTGAGAACAAGCCCTGACAATATTGTAGGTGCTCAGTAAATATTAGTTGAATAAACAACTTAGTGCCAAGAGGAGCTTTTCTGGTTAAACAGAAATTTCTCAAATAGAACTTGAGAAAGGACACCATTTAAATATGGTCATCTTAACCCAGGCCAGGACCCAAACGTGTTGATTTGTCTATTAGTTGCTATTGCCTTGGTCATATTTGCTAAGATGAGCCTTCTTAAATGAAAACAAATTCTCATTTAATGATGGATGAAAAAGAGGGTTGTGTTCTCATAGTTCAGTTTGGCCTGATCTGATTCGTAAGACCACTAGAGTCCATTAAGGCTTCTGTTTTGGTGTGATTTTTTTTATCTTTAAATAAAGTTACTAAATATATGGCAAACTTTTTTCTGTTTACAGTGCATCATAATCATGTCATAGAGCCAGATCTGGAGAATCTGTGAAATCATATAGTTTACTCATGTTAATGATATTATGGCTTTGTATAGGCTGTATCCTCAAAGGATTTTATGCTTTGTCCTTAACCTATGCAAGGCTTTTTAGTCCTCCATGTGTTTTGTTAGAGCTATTGAATTATAGTCACATTTAAGTTTGATTATATATAGCCAGTTATCCTTCTGTGGATTACTTAGAGTAGGCCATTAGCTTTACTTGGCCTTTTCTTCTTCTTCTTCTTTTTTTTTTTTTTGTTTCATGTTAGCATCTCTGAGTAAAGAGGCAAGAAAATAACTAAAAGTGAAAATGAAATGGATTGACAATGTGTTAGTTTCTGAGTTACAGTTTGGTAAGAGAGGCAAAAGCCATTGGCCAAAATAAGATACTTGGATTAGGGCTATTTAAGCAATTTAGACTTGTTGGAGAGAAGAGGCAGTATTTAACCAAGGACTGGATTCTTCTTTCCTCTTCTGTTTATGAATATGTCTTTGGAGGACACTGGTGACTTCCAGTGTTAGATAATGATTTGCCTCATTTACCATAATTCTTCCAGATCCATTATCAAGGTTCAGTCAATGAATCTTTCTGAGTAAATACCAGTTGTGAATGATTTTGAATTGGTCCTCTGACTAAAATGAAAACTTCTTCTTCCTTTTTAAATAATCTACATGAATGGGATCATATTATAGTCAGAAAAAAAGCTAGTTTTTTCCATGTATCAAACCAACAGCTTTAAAGATAGACATTTTCTGTTTCTCAATCCTACAAAACCCTGTGTATTTCATAATCATAAGTACTTTAAGGATCACTGCCCTGTTAGCCTCTGAAAGAGCTCTTCTAGGGTTTACCCTTTGTTTTTTTCTAGAAGTTTTTAGTTTTTTTTTTCAACTTCAACTGGTTACTTATTCTCTTCAACCATGGCCCTGAGATGTGTTTTAGTGCAACAAATACTCTTGAGACTTAACTAGAAAATGAAAAACAGGGAAAAAACATGTTACCCTTCTGACAAAATGTACTCTACATAAGCAGTATGGTTAAACACTAATTTGGGGCTAAGAAAGAGATGTGCTTTGTGTTTTGTTTTTTTTTTTTTTATCTTCTTCTTCCTGGGTTTCATATTTGTGACCTGAGCCTATTTGTGTTTGGAGGGAAAAATGATTTTCCTTAGATTCTTCAGACTGGGGAGAGAGCATACTGAACTGAGAAATTATCATCCCTTCCAATAGCTCATTAACTATAGTAATGTTAGAGCAGGGGAGACAACACTTCATCTCCTTTCCTAGGCCCATGGGAACTTTGCAGTCATTTTGGGGAGCCATTGTTTAAAAACAAATTGAGATCAGCTATAGCCCAATACAAAATGTTTTTGGTGATTAAAAAAAAGAAACCAAATTGAGGCAAAGCAAAGGTGGTGAAGGAGTTTTAGATTTAAAATGTTTGAACAATATTTGAAGGATTTGGGAACGTTTAGCTTGGGAAAGAGAGGAATACAGTGGGTATATTAGAATAAGACTCTGGTTTGAAGGGGTGGAATAAGACCCACTGAATAGAGGTCACAGGGCCATGGATTTGAACTTCACATTAGAAAGAACAAGTTGGTTCCCCATGGAAGGGGCGGCCTCTGTCAAGCAAAGGCTCAATGAGAACTTGGCAAAGATGGTGTGGAGAGGGTCACAGCACTTCTTGGGGTGGACAAGAGACCTATTAAATTTCTATTTATAGCACTTTGCACCTCATAACATGTTCAATTAAATATCTGTTGACCCACAGCTAATAATTTTTTAAAGGTTTTTCTCTTGTGCCCAAAGTGCATGCCTCTCCAGGAAGGAGGTTGCTTACATGTCATTAGGTTGAGACTGGCTATTATACCCTTAGGCTGGAATTGCTTTTTTTGGTCCATTCATTGATGTCTTGTTGAAATCACAAACTGGGTCTTGAGTTAAAGATTAAAAATGTATTGTTTTAGTAGAAGTTGCATGAACCGTTCGCTTCTCTAGGGGATTTTCCCAACCCAGGGATCAAACCCAGGTCTCTCAAATTGCAGACGGACTTTTTACCATCTGAACCCCTAGGGAAGCCCACATGAAATCATGGAAATTATGTATCTGTCACTTGCCAAACATAGGCCATGCTCAGTTTTAGTGAATAGTTGCTATCTCTTCAGGGTTTCAGGATAAACCTTTTTAGCAGAGCAGAATCTTCAGTAAAACATCCCATAAATATACAAACATGAAGTTTTACAGCTTCCATCACAGATGGGCTGGTGGTCACTGGCATAGAGCAGTCCCCAAGATCGATCTAGGAAAAATCTCAAATGACGTTTGGTTAGTTTGTTTGATCCTTTGAAAAAACATGATCTGAAAATGGTTTTAAAAGAATGGAGACCAAGTTGCTTCGTGTAGATAGATCTTTGATTTGAAAATCAGAGATAATTATAAGCAATATTTACTACTAAAGCCCATACTCTAATGATTCCACCTGCAAAATAACTTGCATCCTTGCAACGCTGGTAGATGGCTCTTTATTGGTCTTCTTAAACAAAAGTCATGGGTCTTGCATCACTATGGTGAGAAACATTGAGTCTGGGTGAGACTTTCTTTGATTCCTTTGGATGAGAAATCAGAGCACAAGAGCTAGCCTCCTCTTTAATTGACTGCATGATGTGCATGAGTCAAAATTTTACTTTTCCACTGAGTTAAAGCAAAATTTTTAGAGGTGTTGTGTTCTAGTTCCTGATGGAATCCTTGGTGGGTTGTGACTTTGACACATCAGGGAGTGATGTAGGGAGGTGATTAGAAGATGGAATACTAGGGTAGAGGTGAGGAGTCCTAGAATTCCCTTGAATTAGCTGTAACATTATGCAAAGCACAATCTCTTGAGCATCCATTTCCTCATCTACCAGATAGACTAATAGTAATATACCTGTCAGGATCATTGTGAAGATTAGATAAATTGAAAGTACTGAACTTGGTAAACAGTAAGCACCCAAATATTTGTTCTTTTCTCCTTGATGAAGAGCAGACTTTGGATGGTTTGATACAAGTCTAGATCCTTTGAACAAAACAAGGAACCCTCCTGACTTCAGAAAAACAAAAACGAAAACTCTGTTTCTGAAAGAGCCTTAAAAGAAAGTCATGTATTTAATCCACTTTTCTGCCTTAGTGCATAACTGTTACCCAAGAGACTCCACTTCTTTACCTACTTCAAGAAAGGTATTCTTTCTCTTCCAATGGGCAATTCCAGGGTTGTAAACTCATTATCAGGAAACTTAACCTTATTACTGAAATACCTCACAGTGCAATTTGAACCTCTTTCTTCTTGATCCCATCCTCCATGAGAAGAAAAATTGGTTGATCCTGTCTTCTTTTTAAAGGGCCATGTTTGCCATTTATTATTACCCTTTTGCCTCATTTTAAAAAAGCTGACAGAAAAAGTTCATTAAGGTGATAATTATTATCCCCTTGGGGACTGTCAGGATTCTTATTGATAGTGATCAGATTTAGATCACAAACACTGTTGTAACTCTTCAGTTAGTATTTTCTTCTTTAGTTAACATATTATTGATAACCAAGTGTGCTTCTGAAGACTTATTCTGGTTGTGTGGCTCTTGTTTTCTCCTCTTGGTAAAAGTGGAGTCACGAATCCCAGCTTTGTCAACTACTTTTAGAATGTAATTTCATATGTGACATAATTTGATGGACATAATTACCAACACCTAATATTAGCAGGGTTTCTTGCCTTTTCTACATTCTGAAATAAAAATCAGAATACCAAATGCCTAATAAAGCAAAAATTCTTGCACAGAATAGCAAAAGGTAAGAATCTGGTCTGCTAGAATAATTTGTCACTAGTTGGTTGAATGGTGCAGAGCTTTTGTTTAAAGTTACACAGTTATGCCTGGATTAAATAACAATAGCAAAACTTGAGAAGCCCTCTGAAAAACAGCTGCTCAACATACTGCTTTCTGGAAAGTAATCATTAAGAATAAATATTCTCTTGTTCTATACAATTGCCGAATGGTAGTGGAAATTTCTTGTAGGCTACTTGAATGTCAATTGATTTATTAAAAAAAAAATTTGTGTGTGAATCCTTTAATCCCTTAAGGCATTTTGGGGCTTTTGTGTTCCTGTTGTAGAAAATTTCAAATGACTGGAATGCTGGCTTCTAATTTCTGCTCACTGAAGTGGCCTCTAGACATACCAGATGATTCGGGCCTCTTTGATGATCTGAAGGGAGCTACTTAAATACACTTACATAAAGTGTGTGAATAAAATTGCTGTTTTCAGCAAAAAAAAAAAAAAAAAACAACAACCCACTTTTGATCAAACTTTCAGATAATAAAGGGTTAAGAAGAGATTTTTTTTCATAACCTAAAGGGAAAAAGTATGCCCCATATATATTGTTGCATACATTTTAATGCATGACTTTTAGTATAGGGATGAAATAAAATACAAAATATATAATTCTGGAGGTCTTCTCAGCAGCTAGTTAAACTATTTAGATAAGCTGTTTTATGAAGACAGAAAATCCCTAGTTTCCCTTTATATATCTCTTTCTATCGAAATGGATCTTTAACATAAACATAGTTTAACCAACAAACATAAACAGACTTGTTCATCATGGAATCTTATGGATTCAGCTCTTTATTGGTTTTAAGCATAGGCTCTCAATAATATCTAAATACATCAATATATAAAATCTAACTATTAGCTTCAACACAAGCAAAATACTTGATTTTAAATGTTAATATGCAGATATTAACGGTATGCTGTATCATGTCTTCTGTGTTCATGTATTCCTTTTTAATAAAATGCCTGTTAGAAATATAAGCCGATGATGATGTGAGTGCAATTATCTGAAAACATTTTGTAGAAAGGTGATTGTCTGAACACTTTAATCCACATTAAAAAGTGGTAGAGGGAGCAGGAATCTGACAAGATATTTTAAAATGAAGTTGCATTTCTCTTTTCAAAATGCAGACATAATTCGAACATCATGTAATTTACCCCTGTAAAGTGTACAATTCAATGTTTTTTGGTGTTTTCACAAAGTTGTGCAACCATCACCATTCTTTGACTCCAGAACATTTTCATTATCTCCCAAAGAAATTCTGTACCCATTAGCAATCACTCTTCCTGATTCCCATCAACCTCTCACAACCACTGATCTATTTTGTTGCTACAGATTTGCCTATCCTGGGCATTCCATATAAATAGAATCAT EMBV3_04050 TTCCGGCTCACCTTAGGGGGGAAATGGCTGAGAAGCAACCCAAGGCAATCTTGCAGAAAT Gene GeneID:540418|LOC540418:XM_002698968:118_cdna Constitutive 0 NULL GeneID:540418 28 GENE LOC540418 NULL hypothetical LOC540418 EMBV3_05041 TACAACCAAAATCTTATGTGTACCAGGACCGAGGGAGAGGAGCAGTGACCCCCACAAGAA Gene BVT0102_213423 + 0 NULL GK000012.2:63230372-63693665 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40234 CAATTGGGAGAATTGGGGAAAGGTCAAAAGAAGACATCACGTGTCGGATCACCTCCTGCG Gene BVT0102_179620 + 0 NULL GK000005.2:26804656-26848176 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194329 TCONS_00191206 2 XLOC_117722 XLOC_116836 Coding TCONS_00194329 XLOC_117722 Coding Coding LOC100847767 5:26824616-26826552 = TSS145027 556 1 TCONS_00194329_2 124 0.512589928057554 2 0.713695090439276 7.34120459536386e-05 4.51817739487888e-05 0.000110253115497336 0 4.14391098323323e-05 1.6083870384256e-05 5.17441995097224e-05 1.51970969464276e-06 7.80499802813598e-06 0.000291073271606973 0.000470427759797389 0.00104134793338909 0.000172535405216617 0.000110571888942327 7.74358079241308e-05 0.0033786412430577 0.00488113931438753 0.00136134795121454 0.000280614988432844 0.000102575542916243 5.31889283570864e-05 0.000989612231483013 0.00365191773523482 0.00164592943603777 0.000121591860634788 0.000156862574653762 7.55225867645745e-05 0.000641353092519094 0.00110087461308555 0.000904720853930782 XR_238555.1 LOC101901949 PREDICTED: Bos taurus uncharacterized LOC101901949 (LOC101901949), 7e-82 307 81.11 0.570143884892086 0 coding 0 0 0 0 -0.268649472901234 0.111173405145311 -0.0370890903767567 0.63030488900098 GTGTGTTATTTAGCATATGCAAAAAGGTATTGCATATGGAAAAACCCCTGATGCTGGCAAAAATTGAGGGCAGGAGGAGAAGGGGGCAACAGAAGGTGAGATGGTTGGATGGTATCACTGACTCAATGGACATGAGTCTGAGCAAACTCCAGGAGATAGTGAAGGACCAGGAAGCCTGGCATGCTGCAGTTCATGGGACTGCAAAGAGTCCAACACGACTGAACGACGACAACAGCAAAGGTGGTCCTGGTAAGGAACATGGAACTGACAAGCCACCACCAATTGGGAGAATTGGGGAAAGGTCAAAAGAAGACATCACGTGTCGGATCACCTCCTGCGATCCTTCTCGCAGACATCCATCTTGGCTGAGCAATGACTGCACGACCTGGAAGGACTCTGCGTTAGAATGATTGGCCAAAGACAATCCAGAAACCAATCCCAAAGCCATAAAACCCGGGACTGCGAGCCACGAGGCAGAGCAGTTCTCCTGGGCTCCCTTACCCTACTGCTCTCCACCCAGGGGGCCCTTTCCAATAAAGTCTCTTGCTTTGTCAGC EMBV3_25332 GGAAACTTAGCAAGCTTTTCCATTTGTGGCTCCACGTTGCATTGCTGTGGCTGATGAACG Gene BVT0102_056679 - 1 EMBV3_40347 GK000006.2:27512884-27535298 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202880 TCONS_00202878 TCONS_00202881 TCONS_00202879 TCONS_00202885 TCONS_00202877 TCONS_00202883 1 XLOC_124056 Coding TCONS_00202879 XLOC_124056 Coding Coding TSPAN5 6:27351715-27516551 j TSS152115 4826 1 TCONS_00202879_2 244 0.030874430169913 8 0.970770770770771 0.000616216684019739 0.002582876180089 0.0018658641007388 0.000829487937468852 0.00063242672070219 0.000610816554161419 0.00105430365614072 0.00118345772056134 0.000970708435070831 6.15821319215193e-08 8.39174628775303e-08 1.33435878159484e-07 0.000819864037879106 0.000508975694271482 0.000561955123373091 9.96940413068335e-07 1.77844232444801e-17 5.56568978330552e-08 0.00145628487254416 0.000377175314534933 0.000352469539815448 1.6698813865828e-08 8.49234673283501e-09 6.27228204982141e-07 0.00107969435452182 0.0014625567167241 0.000983343904614374 1.26763343864581e-12 4.34336832371335e-10 2.10468719522147e-10 NM_001076119.1 TSPAN5 Bos taurus tetraspanin 5 (TSPAN5), mRNA. 0.0 1837 99.90 0.211355159552424 NM_005723.3 TSPAN5 Homo sapiens tetraspanin 5 (TSPAN5), mRNA. 0.0 2188 76.57 0.596145876502279 TCONS_00202879_2 sp|Q17QJ5|TSN5_BOVIN TSN5_BOVIN Tetraspanin-5; 9e-174 484 100.00 0.983606557377049 1 coding 0 1 1 1 -3.71662737571343 0.00575002560658317 -0.0317027433018555 0.611208978362802 CAAAGCAGGGACAGCTGGTGTTCTGGGCGCAGAGCGTCTCCGTGGGCTCCGCGGTTCCGGCCTCGCTGTGTGGGGAGAGCGCGAGGAGGGGACGGCGGCGGGCGTCCTGGCGGATTTGATGTGTTGAGGACGATGGAGAAGTTTTTGGGAATAGCATTTCTTGGAATCGGACTCTGGGCGTGGAATGAAAAAGGAGTTCTGTCCAACATCTCTTCCATCACCGATCTCGGCGGCTTTGACCCCGTTTGGCTCTTCCTCGTGGTGGGAGGAGTGATGTTCATCCTGGGATTTGCTGGGTGCATTGGAGCTCTGCGGGAAAACACTTTCCTTCTCAAGTTTTTTTCTGTGTTCCTGGGAATTATTTTCTTCCTGGAGCTCACTGCTGGGGTTCTGGCATTTGTTTTCAAAGACTGGATCAAAGACCAGCTGTATTTCTTTATAAACAACAACATCAGAGCATACAGGGATGACATAGATTTGCAGAACCTCATAGACTTCACCCAGGAATATTGGCAGTGCTGTGGGGCTTTTGGAGCTGATGATTGGAACCTAAATATTTACTTCAATTGCACAGATTCCAATGCAAGTCGAGAGCGATGCGGCGTGCCCTTCTCCTGCTGTACTAAAGACCCCGCGGAAGATGTCATCAACACTCAGTGTGGCTATGATGCCAGGCAAAAACCAGAAGTTGATCAGCAGATTGTAATCTACACAAAAGGCTGTGTGCCCCAGTTTGAGAAGTGGTTGCAGGACAACTTAACCATTGTGGCTGGTATTTTCATAGGCATTGCCTTGCTACAGATCTTCGGGATCTGCCTGGCCCAGAACCTGGTGAGTGATATAGAGGCTGTCAGGGCTAGCTGGTAGAGCGCCTGCCACAGCCACTTCCAGACACTGGACAGACCCAGCCTTCCTGACCCTCCAGTGCGCCCACCTGATACCCATGCTGCACGGACTCTGATCTCAGAGGCATCCCGCAATCCCAACTGATGGAGCTGCCAAGAACTTAGTTTTGGTGGGGGAGGTAAAACTGGGAAATGCTGCTCACTGACAGAATTAAAAAATAACCAGTATGAAAGTCTTTGCGCCATGAATCTCTACTGTAGCCATGAATTTCTGGAAGGTTGGATACTTACCAAATGAAAAAAAAAAAAAAAAGAAGGGAGGGTGGGGGAGCCAGATGTACTAAGTTTGTGGAAGAGTCTTGTCCCTGCTTCAGTGATGGGAAGGCTGTCTTCTGGGCTACAGCCTGAGGAAGTGTGTCGTTTCTGAAACTCAGCCCCTTACCTGGGAGGGGTGTGTTTTTAGCATCCCTACATTTCAAGGAACTGTTAACAACCATCATCCCAGGAAGAAAACAGCTTGCCTTTGGGTTCCCATTTTGTGACCGCATTCGACAAGGAGCTTGGGTGGCCTCATCTGGTCTCTCCTGGAGTGTGTCCTCATAGAAGTTGTGTATTCCTTGCGTGCTGAGCAGGGGCTTTGGAACATTTCATGATGCTGAATTCTAGCAGGACAAATCTTTTCTGTAAGTAGGCCTGAGCTTTATTTATCAATGAAATCCAAGGAGAAAATGAGGTTAATGAAGAGGTAGTGAATACTGCAGTCCACCAAATTAGTTTTTGGGTTTTTTGGAAACTCTGGAATACTTCAGGGTTTTGTTTTGTGGTGGGCCACCCCCCTCTTTTTTCGTCTTCCAGAAGCAAAAGCTATGATACAGTTTCTCTTAAAGTTTAGATTTTTTTTTTTTACTCAGCTCAAATATTAATTTTTTATATAATCTCTCTGCATGACCTGTGAATCTGAATCCACCAGCTCCTTTTCATGCCGCTTTCCTACAAGCCTTTATAAACGTTCTTCTGTCAGCATTTATTTTGTGGGTCCGCAGCCTTAAGTGGTGTGTCCCCCCTTCCCCCCCCAACGCCAACCCCCGTCTGGGAAGGGACCAGGTGGGCGTCACAGGGGCATCTGTGGACTCAGTCTGTGAACCATGTCGATCGATCGTCATGGCCTCTTCTGCAGGCTTCCCCTTTCTCTTGGAATGGAATTAAACCCAGTTCTGAAATGGTGTTGACAGAGTCAAAAGCTTCTGATGGTTTTTTCCTTCTGGTTTTCGTTTGTTTTTATGAAACAACAAAAACGAAACCAGAGTGCAAGACCAGAGCTGCTTCTGTCTTCAGTACCGACTCACCAACAGGATGGTAACAAAGCACAAACAGACGTCTCAAGGGGGAGTGCTGATTGGCCGATCAAGGGGGAGTGCTGATTGGCCGAGAGTTCTGCGATAAGGCGGGAAACACTTGTAGAAACTGCCTCTTGCCCTGTCCCCACTCCAGGTGGTGGGGGATGGGGGAGACAAGTTTTGCCCCCAGAGTTTAATCCTAACTGGTGTCTACCAGAATGTCACCTACCCCGGGGAGCAGATCTTAGTCTGTGGGAAAACCGCAGGCATGTTTCACAGTGATGACACATTTGCCCACACAGAATTGGGCAGCCAGCTAGCATAGCATGTGGAAACTTAGCAAGCTTTTCCATTTGTGGCTCCACGTTGCATTGCTGTGGCTGATGAACGTGTCCGTCTGCTCAGAGAAAGGACAAAAATTCTTTGAAAATCTAGTCTCCAGAGTTAAGGTGTGTATGACTCTGCATGTGTGTTTTTGTGTCTCAGTGTAGTTAAGAGATGTTCATTCCGTATTGTGGCTGTGAGATGATTTTATTTCATTTCTGTCCCCACCACTGTTGTCATTCCATATTGATTGTCATTCCAACCTGGAGAAGACTTGAGCCCTCTGGTTGGCACTCTTGTTTGTTACCTCATTCATTCTCCAGTGAATTCCACCTGACCAGCTGATTCAGAATCAGGCACGCTTCCCACCCTTTGGCACATCCAGTAAAAGGCCAAACAGCAAGTCTGAGTTCTAAATTTTAATTAATCACTCCCTTTTTTTTTTTTTTTTTTTTTTACACTTGAGAGTGGTTGTAATAAAGGCTGTCATTAATAAACTTGGTTCTACCTTACATCAAGTTCTATCTGTCTTCATTCTTTCTTGTGGTTGTGAAATTCTCTAATCCGGTGGTGATCAGACGTTAGCATGCATTGGAATCTCCTGGAAAGCTTGTTAGCACACAGATTAGTGGGTTTGCCACATCCCCAGAATTTCTCATTTAGTGGGTCTTGGGTGGAGCTTGAGAATGTGCATTTTTGACAAGTTTCCAGGTGAACTGTTGCTCCGTGTCTGGGAAAGATACTTGTCAAGGCACCCCTCTGACCAGGTTCTCTCAGAGGGAAAAGAGAGAGAGGGAACATTTTGTGTCTGGGGAAGGAAAGGTCCTTTGTGCTGCTGGACGCAGACTAATGAGAGATGGGGCAGAACTGAGGATGTAGGAAATCTGTCTCCGAAATCACTGTCTGTGATCACCATCACCTGGGGACCATGCAGAATACAGATCAGGCTTTGCCCCTAGCAATCCTGGAGTGGGAGTCGGAGCTTATATTTTTTTTAAGAAACTCCCATGCAATTTTAACACACAATAAGATTTAGAACCCATAGACTTAGGTAAATCTTAATAACATTCACAAGCTTTTTATGGGAAAATAATTTCTAGCAGTCCCTTAGAGCAGGATTCTTAAAAACCCACCTGAGTTTTTAAGATTAAAATACCAGTGTATTGATAAATGTCCTTTCATTGTGAACTATCTCTGCAGAAGGCTTCTGTCTTGCAAACTACTAAAGACTTTTTTCAAAGACAATAAAAATTGAAGGTTCATACAGTATTCTCAGACCATGACATTGTGTTCCCGTACTTGTTTGAGAAACAGTGTAGCTCACTTGTCTGGATATTTGAGACAATGTTATTTTGTTATTATGGCTATAAGGAAATTTATCAGGGGTAACTGGAGATAACCAATTCACATTTGTTGAGTTTTCTTAGCTGTGCTGTAGAGATTATGTGTACATGTGAGGTAATTGGACCTCTTTGTTCAGAACAAACTCTGGGCCAACAAAGGAGAAATGTCACAGCTCAGAAGTAAAAAAAAGATGCTTTGTCTACAAAGCTTAGAACTTACAGGAAGTTTCTTCCAAGTTTGGCAGATAGACGTTGGAGGATGATTATTGGATTTGTCTTTATCTCTCTCGTTTAACCAGTTGCCCACAAATAGCATTCCCTTCTGTGATTTACAAATATACAGTTTTTTTTAATGAATGCAGGAATTCAAAAGTAGACTTTCATGTCATGAAGCACTTGAAAAAAAAGTGCCTTTCCTTGTTCTTTCTCCTTTTTTTTTTCCTCACAAAGAATAAGCCTCTCCTTCTCTTTCAGCTTTCTTCCTGCTCCAGGTCCCTGCCACCCTTTTCTCAAGGGGATGCTGAAAAGTGTTGCTTGGCTTTTTCTTCTTATGCAGCCCGCTTCCTCCTCTGGGCCCTGTGCGTGTTGGTTGGCGGGGGTTGGGGTAGGGGGAGAGCAGGCAGGGATGCACTAATTCTACAGTTTCCTGTTTCTGGCGGGCTTGGACCGTCGCCCTGGGAAGCTGGTGGGCTAAACAATGAGAACCCCGGGCCCAGGGACTTCCCCAGCTCTTTTGTCATTTATTCCACAAAGCCCTCCTCCTCTAGGGAGATCCTGCGGAGACCTCCAAGGAAGGACTGGGAACCCCTCCATAAACACTGGCCAACAGGGTTGGTGGCCAGCTCTCTCCAGGGAGGCCAGGGGGCTGTTTCTTTGTGATGCCTTCTCAGGAGGAGGAAGCCTAAGCTTTGAATGAGAAGGAAAATGCAGTGTTTGGAAATACTCTATCTTGGCCTTATTGTGGTGACATGATAAAG EMBV3_04513 AGCTACCCAGCTGTCCCTGGCTTTGTCGGAGCAGCTGTCACCCACCTCCCAAAAGTGTCA Gene BVV0102_036488 + 0 NULL GK000026.2:23549573-23563106 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23082 TGGATTTGACTTGGCAGCATGTATTGAATTGGCTTTAGATGTGGCCAGTCGCTACAATTA Variant GeneID:515853|LOC515853:XM_002686160:302_cdna 553^732 1 EMBV3_18811 GeneID:515853 3 GENE LOC515853 NULL similar to UPF0486 protein C1orf59 homolog EMBV3_18471 AGGTTCTTCCCGCAGACCGGCTCTGGACAGGTGTGGGGCACCCACTGACAATGCCACGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16276 TTGTCACCTCTGTCTTCGGCACCTGAAAGAGAAGGCGTCTGCCTACATCACACTCACCTA Gene GeneID:515409|DPF1:NM_001076855:625_cdna Constitutive 0 NULL GeneID:515409 18 GENE DPF1 MGC142413 D4, zinc and double PHD fingers family 1 EMBV3_32559 CACTAGGACTTGGTGACAAGGGCTCCTGGTTTAGTCATGGTGTAGGGGACAGAGAATAGT Gene GeneID:507718|PVRL4:NM_001024494:242_cdna Constitutive 0 NULL GeneID:507718 3 GENE PVRL4 NULL poliovirus receptor-related 4 EMBV3_15141 TCTCATGATTAATGCCCATTCCAGTGAAGGCAGTTGTTGATCTTTTCAGTCTTTCAATTC Gene GeneID:536389|ZMYM5:XM_002691849:131_cdna Constitutive 0 NULL GeneID:536389 12 GENE ZMYM5 NULL zinc finger, MYM-type 5 EMBV3_19340 GGAACCCTATTAGAAATCACTGCTTATTACATGCCTCCCATCGTCAAAGTGGACCGGCCG Gene GeneID:517172|SERPINA10:NM_001098997:250_cdna Constitutive 0 NULL GeneID:517172 21 GENE SERPINA10 MGC159637 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 EMBV3_06433 TTTCCTCGGCCACAGGAGACAACCCATCTTGGTCCCTGAATACCCTTAGGTTTATAAGTC Gene BVV0101_014439 + 0 NULL GK000027.2:36734482-36738829 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155564 TCONS_00155562 TCONS_00155565 TCONS_00155567 TCONS_00155563 1 XLOC_094768 Coding TCONS_00155564 XLOC_094768 Coding Coding AP3M2 27:36716829-36736525 j TSS116374 3893 1 TCONS_00155564_2 303 8 0.802741812642803 1.8318591529607e-15 0.00573614524961547 0.00443947127389528 0.00301191167862759 0.000654916686199715 0.00174560776425989 0.00170988674596564 0.000167049349751429 0.00207362855209429 0.000572067986504927 9.02825385379205e-06 8.31608241780131e-12 0.00040664592173478 0.000284229490885589 0.00127862639749675 2.00053784550357e-09 1.13689425173127e-08 5.57952481413902e-05 0.000155841909585335 0.00318255583366323 0.00132163599240157 6.09657762852101e-05 3.16831510515776e-05 0.000241131893158787 0.00157833592448008 0.00257221987022427 0.000156599503393299 2.7251194351895e-05 1.82928458000548e-08 8.02165946471574e-05 XM_005226104.1 AP3M2 PREDICTED: Bos taurus adaptor-related protein complex 3, mu 2 subunit (AP3M2), transcript variant X1, mRNA. 0.0 6762 100.00 0.962753660416132 NM_001134296.1 AP3M2 Homo sapiens adaptor-related protein complex 3, mu 2 subunit (AP3M2), transcript variant 1, mRNA. 0.0 1438 84.29 0.346005651168764 TCONS_00155564_2 sp|P53677|AP3M2_HUMAN AP3M2_HUMAN AP-3 complex subunit mu-2; 0.0 624 99.67 0.996699669966997 1 coding 0 0 0 0 0.0440958463506929 0.718502946401822 0.049326214207673 0.406400598532864 GAGGCGGGGCCTGTCCGCGCGGCCGCAAGGTGGGCTCCGCGAAGAGCTAGCGGGGATTATTTTGGAGTCTGTTCGGAGCCAGTGATAAAAGACAATGTGGTTGTGGTTTACGAGGTGCTGGAAGAGATGCTGGACAATGGGTTTCCACTGGCTACCGAGTCGAACATCCTCAAAGAACTGATAAAGCCGCCCACCATCCTTCGAACTGTTGTCAACACCATCACAGGAAGCACCAACGTGGGCGACCAGCTGCCCACTGGGCAGCTGTCCGTGGTACCTTGGCGACGAACGGGGGTGAAATACACCAACAATGAGGCCTATTTTGATGTGATTGAAGAGATTGATGCCATCATTGACAAATCAGGGTCCACCATCACGGCCGAGATCCAGGGGGTGATCGACGCCTGCGTCAAGCTGACCGGCATGCCCGACCTGACACTTTCCTTCATGAACCCCAGGCTGCTGGACGATGTCAGCTTCCACCCCTGCGTCCGCTTCAAGCGCTGGGAGTCCGAGCGCATCCTCTCCTTCATCCCCCCAGACGGCAACTTCCGCCTGCTGTCCTACCACGTCAGCGCGCAGAACCTGGTGGCGATTCCAGTGTACGTTAAACATAACATCAGCTTCCGGGACAGTAGCTCACTCGGCCGCTTTGAAATAACGGTGGGGCCTAAGCAGACCATGGGGAAGACCATAGAGGGGGTGACCGTCACCAGCCAGATGCCCAGAGGCGTCCTGAACATGAGCCTCACGCCGTCTCAGGGGACACACACGTTTGACCCAGTCACCAAGATGCTGTCTTGGGATGTAGGGAAAATAAATCCCCAGAAGCTCCCAAGTTTGAAGGGAACCATGAGTCTCCAGGCCGGAGCTTCCAAACCAGATGAGAACCCCACGATCAACCTGCAGTTTAAGATCCAGCAACTGGCCATTTCTGGCCTCAAAGTGAATCGTCTGGATATGTATGGAGAGAAGTACAAACCCTTCAAGGGCATAAAGTACATGACCAAAGCTGGGAAGTTCCAAGTTCGAACCTGAAGCGAGAATTTCGCAAAGCAGACGGTCACGAACACTTTTTCATTTCTTAACCTGTCTAGAAGTAAAACCCATCAGCCTGGCTCGTAGGTCCGTGACCCCTCTGGACCCACTGGCTCCCGTTTTCCTTAGCCTTCAGCACCGAGGAGCGAATCCAGGGAGACAGGGTCGCCGGGGGGCCGGGGCAGGACCCACCCACCAGCATCTCCAACCCAGTTCTCAGAGCAGAGGCAGCTGGAGGTACCTGACTGCGTGTTGAACTGTTTGTAACTTTGTAACGGGGTTACCCCAGGAAAAGACCAGCGTTTGTTACTTGTTCCGCTGTAATTTTCTTCAGCCAAGGGAAGACTTCTTTGTTTTTGTTTTTTAACCCCAGGGGGAAAAAGAATTAGAGCGCACTTGGAAGGAAACGAATGTTAGTAGAGGACGGCAGGGGGAAGGCATGGAGTGTGTGCACCCCCATTAAAGTGAAGAGAGAGGGGCACCCATCTCCACCCCCAGGAGGGGCTGGGAGGAACGGAGTGGAGTGAGTTTCCTTCTGAGCCCTCTGTTTGTATACAAGCATAAAGATCTGTACTTCTAGAAGCAAACTGGAAGCTTCTTAAATCGGAGCCCCCTGCTGACATGGAAGCCCCAGCAGGATGAGACTTTTCCCTCAGAGGCTGGGACGCCGCTCCCACCAGCTTGCAGAGCCGCCCTCTCCGGTGAGACGGTGCCCCGCCCGCTCCCTGGGGGGCAGTGGTCTCAAATACCTCTTTCCTTGACCCACCCCTCGCCAAACAACTCCACTCCTTCACAGAATGGCTGCTCCCCTCGGCGCCAGGGCAGGCTGTGTGTCCTCGTCCATGTCGGTCGGGGGCTCCCTGGGGGCTGGAGCCTGACCTTCCCGTTGGCACGCTTTCCCGAGGTCACTCTCAGCCAGACGCTGATAGGAGCGGCCAGTCCTGGGGGCAGGTCCAGTAACGGCATTTCCTCAGAGTGTCTTCTGTTCTGCACCCCCCCTGTATAATCTACTTATTAGCAATATATTGACCAGTCCATGTTTGTTTTTAAGACCCGCCCCCCCTCCCCAGATCCCTTCAGTCGTTGAATAAAACCGATGTAGGAAGATGGGTCCTGTTGCGCCTGTGCGGCCCGGTTCAGGAAACACAGCCCTGAAGGTGGTCTGCAGGCCTCCGCAGCCGGAAGCTTTCCATTCAGCTCAGTGTGCCCATCACCCATTCCGATATTTATAGATCAGACAGGTATTTTAAAATTATAGTTTATGATGCGATATTGTACTCTGCTCTGTGCATGGAGAGAAATGAAGACTTTGTGCTCTCCAACCCTACAATTTTTCTCTAATGCCCTGTTTCCAAGTACTTAGGTAGTGGTTTTTATTTTTTTTTTCCTATAGTTTTCTCTTCCTACTTCCTGGATTTGTTTTTTTACTGCAGAATAATGCTGCTTTGTGGTTTTGCTCTGGGGTCTGTTGTGCTGTGTCTCATAGCCCATCACTCCAAAATTTGTCCTGGATCCAAGATCCCATTCCTGCGCCTGCCATGGTAGGGAAACGTCTCTGCCTGTACGTTCCAGAACAACGGAAGTACTACTCCTGAGTGCTCTGGAGGATTTCAGGGTTTCCTCGGTCACAGGAGACAACCCATCTTGGTCCCTGAATACCCTTAGGTTTATAAGTCTAGCTGTCTTATTCCCTCCAGGGCAGCTCATCCTAATTTCAAGGGAAGAATTTAAGAAGTAAAGTACTGGGGCTGTGGGGCCCGCAGACCATAGCAGGGGAGCACCCCGCACCGAGCTGCAGACCCTGGGATACCCCCTCACCTCAGTGGTGTGTCAGCATAGGTGGTACCGGGTGCCCCCAGCAAGCCACTCGGTTCCACACTTGTTTAACATGCAGAAGCATCTTCTCTGTTTAAATCTTAATAAAGTTGCGTGTTGCCAGTCCTTCATGTCCTGAGTGTCTTGTTACTAGGACCGTGGGCGATGCTCTGCACACATGCCCAGCGGAAGCAGGAAGAAAGAGGAATTCAGGGGATCTCACTGCATCTGCACTTTCCAACCAGCAGACCGAAGCTGTATATATGGTTTGGGTATGTCATCTTGCAGGTCGTGAGAACAAAGGTCCAGATCAATCAAATTATGTTCCCCAGGGTACAGAAGACGAAACCACTGAAGCTGCTGGTGTCTCTTCTAGCGCTTTCCCTGTCCTGGCCTCTCGTGCTTCTTAGGTTGATTAATTGGGACGTGAAGCCAGGTGCAGGGGTCCTGGTTATCCTGATTGCAGTGAAGACTTCCCGGAGTCTCCTGGGATGTGTAGACGAGGGTCCTCTCATGGCCGGGGGACACTAAGAAAAGGACTTCTCTCTGCCTTCCGACCACAAGTTATTGCTACCCCATCCTGTCTGTTTCATTGACTCATCTCCCTGCCTTGGGTCTGGCTGTTTCCTTAGCCTCACAGTGTGACCAGCAAGGTTCATAACACTTGTACTTTCCTCTGTGGCCAGTAGGTGGTGACTCAGTGCCAACATTAATTTTTTCTCTTTAATTGTTAGAAAAAAAATTTTTTTTGAAGGAAACTGAAACTCTTTAAATTTTGCCTCAAGACCCCAAGTTTGTGAGTCTTTGACTTTGGAGGTTAGATGTGGAACCAAAGTTTATGATCCTCTTTCGACAACCTGACCTAGGATGGGAGCTCCAGGGGAATGGTAGTTTCCATCATTTGAGTTTCTCTAGGTCTTTACCCATTAAAGCTGTTTGCATGATTCTATGAGGATCTTTTTTGTTCTTTGGGTTTCTATTAACGTCTTTTATTAACAGCCAGAGATAGTAAAGCAGTACTACTTATTTCCCTATCGCCC EMBV3_10830 CTTGCTTCCGGCAAGGGAAGTATTTGACTTCTTGCTTCAGTCATCAGCCAACAGGAGAGA Gene GeneID:536815|ROBO1:XM_002684651:6_cdna Constitutive 0 NULL GeneID:536815 1 GENE ROBO1 NULL roundabout, axon guidance receptor, homolog 1 (Drosophila) EMBV3_34561 ATCTACCGCGATCTATGGATTTTGAAGAGGCAGAAAGAAGTGAGCCAACTCAAGCTCTGG Gene GeneID:509142|TXNL1:NM_001077886:74_cdna Constitutive 0 NULL GeneID:509142 24 GENE TXNL1 NULL thioredoxin-like 1 EMBV3_05660 ACCTTCCAAAACTGAACCAGGAAGAAATAGAAAAGCTTAACAGACCCATCACAAGCACGG Gene BVT0102_010874 + 0 NULL GK000003.2:59596884-59701750 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060450 TCONS_00238892 TCONS_00064860 TCONS_00208375 TCONS_00224115 TCONS_00248862 TCONS_00162600 TCONS_00175082 TCONS_00135549 TCONS_00249014 TCONS_00060447 TCONS_00250313 TCONS_00250441 TCONS_00091329 TCONS_00111488 TCONS_00060451 TCONS_00240558 TCONS_00238434 TCONS_00055354 TCONS_00206538 TCONS_00020842 TCONS_00223458 TCONS_00160988 TCONS_00071045 TCONS_00070842 TCONS_00122012 TCONS_00251280 TCONS_00139971 TCONS_00254568 TCONS_00131040 TCONS_00162777 TCONS_00060449 TCONS_00197542 TCONS_00252355 TCONS_00047349 TCONS_00219474 TCONS_00209635 TCONS_00250940 TCONS_00136862 TCONS_00023027 TCONS_00031937 TCONS_00239691 TCONS_00229574 TCONS_00123617 TCONS_00251853 TCONS_00130261 TCONS_00207136 TCONS_00060448 TCONS_00079610 TCONS_00249207 TCONS_00152669 TCONS_00141271 TCONS_00206748 TCONS_00107333 TCONS_00063165 TCONS_00017462 TCONS_00208557 TCONS_00210179 TCONS_00056147 TCONS_00190575 TCONS_00166316 TCONS_00060446 TCONS_00206627 TCONS_00062825 TCONS_00196914 TCONS_00207276 TCONS_00011865 TCONS_00239075 63 XLOC_036736 XLOC_145558 XLOC_039584 XLOC_126888 XLOC_137411 XLOC_151805 XLOC_099481 XLOC_104865 XLOC_081772 XLOC_151957 XLOC_153256 XLOC_153384 XLOC_056104 XLOC_067388 XLOC_147222 XLOC_145101 XLOC_033162 XLOC_125060 XLOC_011517 XLOC_136758 XLOC_097881 XLOC_042818 XLOC_042619 XLOC_073568 XLOC_154223 XLOC_085033 XLOC_157500 XLOC_079745 XLOC_099658 XLOC_119203 XLOC_155296 XLOC_027485 XLOC_132793 XLOC_128146 XLOC_153883 XLOC_083073 XLOC_013697 XLOC_018182 XLOC_146356 XLOC_139069 XLOC_075169 XLOC_154794 XLOC_078972 XLOC_125654 XLOC_048495 XLOC_152150 XLOC_092434 XLOC_085699 XLOC_125269 XLOC_063244 XLOC_037892 XLOC_009039 XLOC_127070 XLOC_128689 XLOC_033950 XLOC_116610 XLOC_101154 XLOC_125149 XLOC_037552 XLOC_118579 XLOC_125794 XLOC_007415 XLOC_145741 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_38198 ACAGGAGAGAGCCTATAGATCTTAATAACCCTTGCAGTGCCCACACAATGCGCTCGTAGG Gene GeneID:509751|ABP1:NM_001034361:607_cdna Constitutive 0 NULL GeneID:509751 4 GENE ABP1 MGC127423 amiloride binding protein 1 (amine oxidase (copper-containing)) EMBV3_05790 AGAGTGACTGCAAGCACAAGGAGGATGCTGGTGTGAGGTGCTCTGGTGTAAGGACAACAT Gene GeneID:751809|LOC751809:NM_001143742:76_cdna Constitutive 0 NULL GeneID:751809 5 GENE LOC751809 WC1 WC1 isolate DV9 EMBV3_24488 CGAAAGAGTGGCTGGAGTTACGACCTGGCCGGACCTTAGACCCGAACGAGATCGATGTGT Gene GeneID:100296399|LOC100296399:XM_002696903:392_cdna Constitutive 0 NULL GeneID:100296399 22 GENE LOC100296399 NULL hypothetical protein LOC100296399 EMBV3_06640 AGAGAGCTAGGTGGCCTCCCCTCGTCCTCATGTTTACGTTTGCAGCCTGAAGCACTTTAA Gene GeneID:511902|LOC511902:XM_002698212:784_cdna Constitutive 0 NULL GeneID:511902 25 GENE LOC511902 NULL similar to Chromosome 7 open reading frame 43 EMBV3_13437 GGTTATAATTCAGCTCCAAACCTCACTGCCATTCCCACAGTGACTCATCGAGAGCAGGAG Gene BVT0102_133743 + 0 NULL GK000001.2:89123999-89259002 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009234 TCONS_00214126 TCONS_00214128 TCONS_00214125 TCONS_00214127 2 XLOC_004790 XLOC_130614 NonCoding TCONS_00214125 XLOC_130614 NonCoding NonCoding LOC100848957 7:71848867-71905412 = TSS160243 640 1 TCONS_00214125_1 87 0.053125 4 0.988752122241087 0.041605738721103 0.0564932045753275 0.0456834779681841 0.0387665667793615 0.0421255130919707 0.0131935805445876 0.0417127446043656 0.0214420025920526 0.0383372258035549 0.000580528977554497 0.000676117994901308 2.76361089822284e-101 0.00791299092794076 0.00847805916318142 0.0217072461123818 0.000360466618714192 9.50127108279992e-05 0 0.117162914022923 0.107744721396436 0.0353063096991638 0.000226274108049415 0 2.22906028547106e-55 0.0518340250575565 0.0771969968634445 0.0367968619662732 0.000408188445623797 0.000363053325817763 0.00049640212741299 0 noncoding 0 0 0 0 -3.78136675418984 0.0147887876405962 -0.475555765345737 0.000391925008336339 ATGACGATGACAGGAGGCAAAACCGGTTCAAACTGGTGCACTTTCAAGAGAGAACAGAGAAGGGATGCAGAGCTGCTGCTGACTCTCCACTTTGCTTTTTTTGTCCTACATTGGAGGAAACTGGTGTGTTCAAACTTTGGTCTACTGGAATCAGTTTGTCTGAAGGGAAATGCTTCACTGAATGGTTATAATTCAGCTCCAAACCTCACTGCCATTCCCACAGTGACTCATCGAGAGCAGGAGGATGCTGGGAAAATCTTTTAGGCCATTTGGAGGAGTGCTTGAATAAGTGGTTTAACACCTGTTCACAGACTACTCACCACCCTCTGACCCTCATCCACCAAGCCCTTTGGTATTTCATGGAAGACTTTATTGGAGCTGGCCAGTGTTGGGTGCCTTGTGAATTCTATGCATAATTTAGCAAATTTACCAATGTTTGCCACCATGTGTTCTAGCCCTGACTCTGGGACTTCAAGACTCCAGCCATATTTTAGAGCCTTTGACTTTCATTTGTCCATCCAGTTCTGTAAATATTGACAAAATGAGGCTCTTAAATACAGTAAAATGGGCTCAGATGAATAACAAATCTATAGTGAAGATGCCTAAGTCTCTCAGTAAACCTCAAACAAATCCTGGGAAA EMBV3_41579 GGCCAACACTCTGATTCTTGCTCGGAAGTTTCTGGGTGAAGATGACCTCCAGGAGAGCCA Gene GeneID:282351|ST3GAL1:NM_001097983:17_cdna Constitutive 0 NULL GeneID:282351 14 GENE ST3GAL1 SIAT4A ST3 beta-galactoside alpha-2,3-sialyltransferase 1 EMBV3_24166 GTAAACTACTTGGGGAACCTGATCAGTCAGTTAACATCACTTTTCTTTGGCAAAAAAAGA Gene GeneID:525246|JAK2:XM_002689603:8_cdna Constitutive 2 NULL GeneID:525246 8 GENE JAK2 NULL Janus kinase 2 EMBV3_23412 ATTCAAGTTATCCCTCAAACCTGCATCCCCGGCTACCTGTTGTTTCTGTGGCGTTCCCCT Gene GeneID:539213|LHX3:NM_001038620:175_cdna UTR3_Alt 2 NULL GeneID:539213 11 GENE LHX3 NULL LIM homeobox 3 EMBV3_21778 TGGCCAAGAAGCGGACCAACATTATTCCTGTCATTGAAGACGCTCGGCACCCACACAAAT Gene GeneID:538548|FBL:XR_082710:176_cdna Constitutive 0 NULL GeneID:538548 18 GENE FBL NULL fibrillarin EMBV3_37813 AGGATCCTGACCCTTCCAGAAAACCGAGGAGAAAGGGCGTGGCTTTTCCACTTCTGAAGG Gene BVT0102_296354 + 0 NULL GK000002.2:131928731-132005288 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106902 TCONS_00106905 TCONS_00106903 1 XLOC_062929 NonCoding TCONS_00106902 XLOC_062929 NonCoding NonCoding - 2:131929625-131933983 - TSS78586 1144 3 TCONS_00106902_3 58 3 0.738122561395456 0.000109550359847611 0 2.79591067674702e-11 0 8.18991313194514e-11 0 1.40465744973979e-10 0 2.28564586892964e-30 1.44468536484857e-10 9.15925798972284e-28 1.4817606566002e-15 0 0 0 0 0 0.00516285185103651 1.53494624166193e-10 0 0 0 0 0 0.000183200472971383 0 0 1.0475929080449e-05 0 0 XR_230478.1 LOC101906756 PREDICTED: Bos taurus uncharacterized LOC101906756 (LOC101906756), 0.0 939 94.70 0.510489510489511 0 noncoding 0 0 0 0 -0.123020226486067 0.315602974503751 0.00230680401710612 0.971152377101425 AGGGAGAGGTGGGCCCTGCCCTGAAGGTGCCCAGATCTTCTCTGGACTGAAGGTCTGTGCCTTCTCTCCATCCTGGAGGACTGCATGTTCCGAAAAGAAGAGAAGAAAGGTCAGGTATCCTGACCGCAGTTCTTTCGCTCGCATGATGGGCATCCTGGATTGCTGGATCAGTGAGGCAGGAGCTGGGCTGAGTACTGGAGATGTACAACAGTGAACACGACAGGATCCTGACCCTTCCAGAAAACCGAGGAGAAAGGGCGTGGCTTTTCCACTTCTGAAGGGGACACACCGGCAGGGGAGGTGCATACCCAGAGGCAGACCCTGCTCTGGCGGCAGAACCAGGACTAGAACTGAGGACTTCCAGCACTCGAGCTGTCTTCTCTGTTCCATCCCACAGGCTGCCTGGGAAAGACAGGCCCTGGTCTTCATGCTGCTCGGGGCACAGCAGGGAGAAGATGTGCTGCCCATTCTGACCCTCACCCCCAGCTCCTCGGGGGTCCCCAGTATTCCCCTCCCCAAACAGCCTCATGGGAACAAACCTGTTCTACAGATACCATGATTCCCACCCCGGCCCCATGTTACAGGAGCTTCAAAACCCTTTCTGCTTCTGATCATGTAGGAAAATACATAAATAAAAGTTAGACATGCACTGTCGTTGACTCCACGATTCCTTGTGATCAGTATCGTCCCTGTTTTCTACATGAAGAGCCTGAAGCTGCGTGGAACATGGTCACTAACCCAGAGTAAGGCAGCTTTCAAGTTGTGATGTGTGAATTTGTTTTCTCTGAAGGAGCATACAGGAACCGGAGCTGGCTGGGAATCTGGGCTGCACCTCGGTTACCCAGCATAAACTCACAGACTCTGAGGGCTGGACCTGAATCGGTCATCTATTCTAGTCCCTGTTTCAGTTTTTAAGTCTTTGCTGCTTCCCCCACAGTGGTCACCTGGCCCAAGTTTGACGTTTCTCAGATGGGAGACCCTCTAATTTTGCGGAGCCCAGAGCTGGGGAAAGTAGGCCAGGTTGGAGCAGTGAAGCAGAAGAAATTCCTGAGCATTAGCTGGGATGAGCACAGAGACTGCCAGGAGGGACAGGCATGCGGAGCCTGGAAACCCACTTCCTCAAAGGTCTTCCCTGCCGGTAGTT TCONS_00104069 TCONS_00104070 r 5' 5174 TCONS_00104069 TCONS_00104070 r 5' 1376 EMBV3_17702 ATGGTGGTTATGAATTGCAGGGTACGTTGGCCATCCCCTGAACCAAGAATGGTGACTGAG Gene GeneID:511371|SIX1:XM_002691019:360_cdna UTR3_Alt 2 NULL GeneID:511371 10 GENE SIX1 NULL SIX homeobox 1 EMBV3_14522 CTCTCGTCTGTGTGTGCGTCATGAACTACGTGCTGGTCGGTATGGAAGCAGCTGTGTTTT Gene BVV0102_242892 + 0 NULL GK000003.2:113783353-113786836 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174794 TCONS_00174793 TCONS_00174795 1 XLOC_104694 Coding TCONS_00174794 XLOC_104694 Coding Coding USP40 3:113785617-113868152 j TSS129639 5028 1 TCONS_00174794_11 709 0.0517104216388226 32 0.939467371022851 0.000270182203857214 0.000681679517691082 0.000449294153336719 0.00082146043597479 7.56030601158938e-05 0.000213469022740573 0.00026369259969569 0.000868293645933098 0.00100846263926536 0.00027274165139894 0.000144635513256618 0.000143407915994908 0.000254833586562373 0.000580220948061775 0.000587593909067041 0.0013198152637949 1.02106842564665e-99 0.00249932217357191 0.00100956790580104 0.000753361847796553 0.000165176170184969 0.000630941419684392 0.000609986054879649 0.000811507403596486 0.00021994238713566 0.000519602232311083 0.000190452078186086 0.000777511033697899 0.000155863424067093 0.000777028260172963 XM_609625.6 USP40 PREDICTED: Bos taurus ubiquitin specific peptidase 40 (USP40), 0.0 3694 99.95 0.407716785998409 NM_018218.2 USP40 Homo sapiens ubiquitin specific peptidase 40 (USP40), mRNA. 0.0 2264 84.60 0.406921241050119 TCONS_00174794_11 sp|Q9NVE5|UBP40_HUMAN UBP40_HUMAN Ubiquitin carboxyl-terminal hydrolase 40; 0.0 1033 77.18 0.918194640338505 0 coding 0 0 1 1 -0.260066825730257 0.0691744948273426 9.77357495303421e-06 0.99983926677169 CGGGAGAACTGCATACGCCATCATGGTGGCGCCCCGTTGCTGCGCGTTGTTTCGCTTCCAGTTTTGTCCGGGGCGGGGGTCTGGGCTTTAGGCTGGTAGTATTTAGTTTCACAATGTTTGGGGACCTATTTGAAGAAGATTATTCCAGTGTGTCAAATAATAATGGAAAAGGGAAGAGATTAAAGACCAAAGCTTTGGAGCCACCTGCTCCTAGAGAATTCACCAATTTAAGTGGAATCAGAAATCAGGGTGGAACCTGTTACCTCAATTCCCTTCTTCAGACTCTTCATTTCACACCTGAATTCAGAGAAGCGTTATTCTCTCTTGGCCTGGAAGAGCTTGGTTCGTTAGAGGACAAGGATAAACCTGATGCAAAGGTCCGAATCATACCTTTGCAGTTACAGCGGTTGTTTGCACAACTTCTCCTCTTAGACCAGAAAGCTGTATCCACAGCCGACCTCACTGACAGCTTTGGGTGGACCAGTGATGAGGAAATGAGGCAACATGATGTGCAGGAACTGAATCGAATTCTCTTTAGTGCTTTGGAAACTTCTTTAGTTGGAACCTCCGGCCATGACCTCATCAACCGTCTATATCACGGAACCATTGTTAACCAGATTGTTTGTAAAGAATGTAAGAATGTCAGTGAAAAGCAGATTTCCTAGATCTAACAGTAGCAGTCAAAAATGTATCAGGTTTGGAAGATGCACTCTGGAACATGTATGTAGAGGAGGAAGTTTTTGACTGTGACAACTTATACCACTGTGGAAACTGTGACAGGCTGGTTAAAGCAGCAAAGTCGGCCAAATTACGTAAGCTGCCTCCCTTTCTTACAATTTCATTATTAAGATTTAATTTTGATTTTGTGAAGTGTGAACGATACAAGGAAACAAGCTGTTATACATTCCCTCTCCGGATCAATCTCAAGCCTTTTTGTGAACAGAGTGAATTAGATGACTTGGAATATATGTATGACCTCTTCTCAGTTATTATACACAAAGGTGGTTGCTATGGAGGACATTATCACGTGTATATTAAAGATGTCGATCATTTGGGAAACTGGCAGTTTCAAGAGGACAAAAGTAAACCAGATGTGAATTTGGAAGATATTCAGAATAAAGAGGAGGTTGATGATCCATTGATGATTCTAAAAGCAATTTTATTACAGGAGAGTAATCTAATTCCCGTTGATCAGCTGGGCCAGAAACTCTTGAAGAAGATAGGAATATCTTGGAATAAGAAGTACCGAAAACAGTATGGACCACTGCGAAAGTTTTTGCAGGTTCATTCTCAGATATTTCTGCTCAGTTCAGATGAAAGTACAGTTCGTCTATTGAAGGATTCTTCTCTCCAGGCTGAGTCTGATATCCAAAGAAATGATCAACGACTTTTCAAGACACTTACTTCAGAATCCTTAACATTAAATGATAGACCCTCCTGTCCCCACTGGTTTGATATAAATGATTCCACAGTCCAACCAATCAAGGAAAAGGATATTGAACAGCAATTTCAAGGAAAAGAAAGTGCCTACATGCTGTTTTATCGAAAATCCCAGTTACAGAGACCCCCTGAAGCTCGAGCTAACCCACGATACAAGGTTCCATGTCATTTGCTGAGTGAAATGGATGCAGCTAACATTGAACTACAAATAAAAAGAACTGTGCCTGAGGTACCTGAGTCATCTAGCTCTCCATTGGCTGAGCTCTGGAGTGTTTTTGGTGCAGTGCCTCACAGAAGCTCCATGGATTCAGAAATGTAGCAGATGCCAGGCTGCTGCTGAGGACATATGACCTGGAGAGAGTAGACTCCAGGGATCATGAGGCTGACTTCAGATAGTTTATGGGAGGGTCTGTGAGGTCTAGTGGAAGGAAGGAGGAAAATAGAAGTTGTAACCCCTTCATGGATCACAGCCTTGTCGTGGCGAAGGGGCTTGCGTAACTCAATGAAACTATGAGCCATGCCGTGCAGGGCCACCCAAGACGGACGGGTCATGGTGGAGAGTTCTGACGAAACGTGGTCCACTGGAGGAGGAAATGGCAAACCACTCCAGTACTCTTGCCACAGGAACCCCATGAACAGTGTGAAAAGGCAAAAGGATATGACACTGCAGGACACGCTCCCCAGGTCAGAAGGTGTCCAGTATGCTACTGGGGAAGAGTGGCGGACGATTGCTAATACCAGAAGGAATGCAGCAGGCAGGCCATAGCACTTACCACGGTTCAGGAGCATGTTTCCAGCATTTTGCTCGTAATGATAATCTCAGCATTCGAAGATTTCAAGTCTCAATATTTGTTCAGAGTAACACTGCACAGCGTACATTAAAACTATTTTCCTTGGAATTCACGGTGGCAGAGCTATTAATTGAGAAACTGAAATGTGACCTCTTGGAGCACGGAATAAAAGAATGTTAATTATAATTACTTAAGTGGAGAACTTCTTTATGTTGTAAATCAGATATTTTTGGTTTGAGATAAAACAGTATCTTTTATAAAAACATGGCATTTATGTGTTTCTTATGCCTCTTTAAAGGGCAGAATGTGATTCTACAAACAATACTATTGAGTTACATCTCCACCTCGGCCCCCATTATCATTTCTTCAATGGGGCTCTGCACCCAGTAGTGTCTCAAACAGAAAGCATGTGGGATTTGACCTTTGATAAAAGGAAAACTTTAGGAGATCTTCGACAATCAATATTTCAGCTGTTAGAATTTTGGGAAGGAGATATGGTTCTTAGTGTTGCAAAGTTTGTACCAGCAGGACTTCATGTCTGCCAGACACTTAATGGAGATGACCTGGCACTGTGTGAAATTGAAATCACTGACGGAGAAGACATCTTTGTATGGAATGGGGTAGAGGTTGGTGGAATCCAGATTCCAACCGGTAGCGACTGTGAACCTCTGCTTTTAAATGTTCTTCATGTAGCAACAAGCAGTGAGGGAGAGGAGTGCCAGCAGTTGATAGAATCTCCACATGTCTTTCCATCTAATGCGGAAATAGGCACTGTATTCACAGCCCTAGCAATTCCAGAGGGAGTCATCTTAATCAACAACACTGAATCTAGAGGTGGAGAGAGCTGGATCACCATTCCCAAGGAAGACTTGAAAAAGACATTCAGAGAGCAAGGCCTCAGAAACGGAAGCTCAGTTTTAATCCAGGGCTCTAATAATGGTAACAGTTTGTTGACAAAACAAGGGAAATGGATCGATACTGTGAATGAGATCAACTGGCTCCAAGTTAGAAATTTAAGCCAATTAGAATCTGAAGAGGAACAAGTTAAAATATCAGCAACTCTTAACACAGTGGTGTTTGATATTCGAATTAAAGCCATAAAGGAATTAAAATTATTGAAGGAACTAGCTGAGAACAGCTGTTTGAGGCCTATTGATAGAAATGGGAAACTGCTTTGTCCAGTGCCAGACAGATGCACTCTGAAGGAAGCAGGACTGAAGATGGGGAGTTCACTGGGACTGTGTCCTGGAAAAGCACCAACTTCCTCTCAGCTGTTCCTGTTTTTTGCTTTGGGGAGTGATGTTCACCCTGGGACAGAGATGGAGATCATAGTAGAGGAAACAATATCTGTGAGGGATTGTCTGAAGATAATGCTGGACAAATGTGGCCTCACAGGAGAAACATGGCATTTACGAAAAATGGATTGGTGCTTTGAAGCTGGGGAGCCTTTATGTGAAGAAGATGCAAAGCTGAAAGAGCTTATGATCTGTTCTGGAGATACTTTGCTTTTAATTGAAGGAAAACTTCCTCCTCTGGGTTTCCTGACGGTGCCCATCTGGTGGTACCAGCCTCAGGGGCCGCTGCATCACTGGAAGGATCACCAGGACCAGACGAATTGTACCCTTTCTCAAGGCAGCGTCTGGAAAGCCAGTTCCACTCCAGGTGCTCCCAGTGACGCACACGCGGAAGTTTCCCTCTGGTACTTGGGAGACCTTGAAATCTCAGAAGATGCCACCTTAGGGGAGCTGAAGTCTCAGGCCATGACCTTGCCCTCCTTGGAGTTTTCCATCCCATCCCCAGCCTTCCTCAGAGCCTGGACAGTGGAAAATAAGCGCCCAGGCCGGCTCTTACGAGGCCACCAGCAGCAGCTCAAGGAATATAAATTGGGAAAGAGAACTGAGATCTGCTTAGAGCCCCTTCAGAAAGAAGAAAACTTGGGCCCCTGGGACGTGCTGCTGCGGACACAGATGCGCCTTCCTGGCAAGAGAGCCTACGGCCCGCCCGTGGACGTGCTGTGGGACACAGCCCGCGGCTGGACGGCCAGCTCCCTGAGGCAGCGAGTGGCCGATGTCTACTCACTTCCCGTGGAGAAAATTGAAATTGCCAAATACTTTCCTGACAAGTTTGCATGGCTTCCAGTGTCTAGTTGGAGCCAGCAAACTACCAAAAGGAAAAAGAAGAAAAAGCAAGATAATTTGCAGGGTGCACCTTATTACTTGAAAGATGGAGATACTATTGGTGTTAAGAATCTCCTGGTTGAAGACGATGATGATTTCAGTACCGTCCAAGACGACATCGGAAGAGAAAAACTGAAAGAGGTCGCCCTGGGGAAAAGGAAAAGACGGCGTCAGAACCGCCGTCAGAAACCCTCCTCTCGTCTGTGTGTGCGTCATGAACTACGTGCTGGTCGGTATGGAAGCAGCTGTGTTTTAAGAAGTTGGACTTTGGCGAGTGCTTCCGGCTCTCCAGCACCAACTCCGTCTCAGGAGACCCAGGCGACTCTCCAGAGCGCCCAGTGGGCGGGGACGATGCCATAGGCTGAGCGAGGCTGGACCCATGCCCCGGCCAGGGCTCCCTATGCCCCTTCATTCCACCGTAACCCGACAGTAAGGTAACAGCCGTAACAGCCGGAAGCCAGAGGCCTCAAGGGAGGTCACTCACCACAAGAAAAGGTCGAGGTGCCTCAGGCGTCTGCCTGGTCTCTGCTCCCCTCCTTCCACATGGAAGCGGGGCTACAGGGAGAAAGCGCTAAGATTTTGTTAAAGAAAAAATAAACTGTTGGATTTGTCACCTCCTG EMBV3_37643 GCGTTTTATCATGATCCTGACTGAGCACTTAGTACGCTGTGAAACTGATGGGACCAGTGT Gene GeneID:100124428|NCBP1:NM_001102538:2_cdna UTR3_Alt 2 NULL GeneID:100124428 8 GENE NCBP1 MGC139394 nuclear cap binding protein subunit 1, 80kDa EMBV3_00521 GGTGCAGATGGCCCAAGCAGGTCAGCCAGGGAAAATGCCATGTGCGATATAAACGAACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14658 GCGGAGTTCATCAGCACGTATGTCATGATGGGGCCCATATGAATGCGGCCTTGACCTTCA Variant GeneID:615498|AQP7:NM_001076378:64_cdna 409^532 1 EMBV3_07916 GeneID:615498 8 GENE AQP7 MGC133718 aquaporin 7 EMBV3_29262 GCCTGGCTCCGGGCTTCAGGGGACCTGGAATAGAAACTTGGATCTATGCACTACGTTTAT Gene GeneID:515928|SETD7:XM_002694368:158_cdna Constitutive 0 NULL GeneID:515928 17 GENE SETD7 NULL SET domain containing (lysine methyltransferase) 7 EMBV3_42049 CGTGGAGTTCGTGGACAAGCCGGTTTTTCGCACAGTCCAGACCCACAGACATGCAAACTA Gene GeneID:507188|GLB1:NM_001035043:56_cdna Constitutive 0 NULL GeneID:507188 22 GENE GLB1 NULL galactosidase, beta 1 EMBV3_18236 GTCTGCACGCTTTCCCCAGGATGTCTTGGATGTCTTTTAATCAAGGCAAACTACATGGCC Gene BVV0102_177596 + 0 NULL GK000018.2:8027156-8041295 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082182 TCONS_00082185 TCONS_00082186 TCONS_00082181 TCONS_00082180 TCONS_00082183 1 XLOC_050932 Coding TCONS_00082186 XLOC_050932 Coding Coding GAN 18:7982464-8028813 j TSS62042 4457 1 TCONS_00082186_4 596 11 0.904073530680936 5.77185583387058e-09 3.85968881142997e-10 1.77355691608127e-08 4.8488747102854e-09 1.09197183780380e-11 9.52041687136052e-30 2.42680117839931e-08 7.76745362361596e-63 0.000273617833182696 2.85295573738326e-05 0.000669491445368212 5.15681052000663e-09 8.37882102878503e-51 2.71561745023792e-08 1.25038974066641e-14 2.31713840841968e-06 7.81669730501265e-60 0.0014716036055569 3.50607902661669e-08 6.18994973587753e-14 2.93626439757721e-49 5.06342773170708e-08 0.000972473314636398 0.000611713248304651 2.79306579763532e-07 4.06136343054943e-14 1.35822982546783e-07 6.545142425884e-09 1.23470759278999e-08 3.40903542327244e-08 NM_001099015.2 GAN Bos taurus gigaxonin (GAN), mRNA. 0.0 5007 99.64 0.62777653129908 NM_022041.3 GAN Homo sapiens gigaxonin (GAN), mRNA. 0.0 2232 86.18 0.42450078528158 TCONS_00082186_4 sp|Q9H2C0|GAN_HUMAN GAN_HUMAN Gigaxonin; 0.0 1204 98.32 0.998322147651007 8 coding 1 0 1 1 -0.0451391800927195 0.729974438298655 -0.0187871005957708 0.791884176850541 GGATCTCGCTTCGCCGAGCGCGGGGCCGAGCGGGCGGGGCGCGCGCGGGCCGAGCGGACTGGGCGCGCGCCGAGCGCAGGCGGCTCGCGGGGTCCGGCGGGGCGACTTCCAGAGCCCCCACGGGCGGGCGGAGGAGCGGGTGCCGCGATGGCCGAGGGCAGCGCCGTGTCCGACCCTCAGCACGCCACGCGCCTGCTGCGCGCGCTGAGCTCGTTCCGGGAGGAGTCCCGCTTCTGCGACGCGCACCTGGTCCTCGACGGGGAGGAGATCCCGGTGCAGAAGAATATCCTGGCTGCCGCCAGCCCGTACATCAGGACAAAGTTAAACTATAATCCTCCAAAAGATGATGGATCAACCTATAAGATTGAACTTGAAGGGATATCGGTAATGGTTATGAGAGAGATCCTGGATTACATCTTCAGTGGGCAGATCCGGCTGAACGAGGACACCATCCAGGACGTGGTGCAGGCGGCGGACCTGCTGCTGCTGACGGACCTCAAGGCGCTGTGCTGCGAGTTCCTGGAGGGCTGCATCGCCGCCGAGAACTGCATCGGCATCCGCGACTTCGCGCTACACTACTGCCTGCACCACGTGCATTACCTGGCCACCGAGTACCTGGAGACCCACTTCCGGGACGTCAGCAGCACCGAGGAGTTCCTCGAGCTGAGTCCGCAGAAGCTGAAGGAGGTGATCTCTCTCGAGAAGTTAAACGTCGGCAACGAAAAATATGTGTTTGAAGCGGTCATCCGATGGATAGCGCACGATACGGAAATAAGAAAGGTCCACATGAAGGATGTCATGTCAGCGCTGTGGGTTTCAGGGTTGGACTCGAGCTACTTACGGGAGCAGATGCTCAATGAGCCGTTGGTCCGCGAGATCGTCAAGGAGTGCAGCAACATCCCCCTCAGCCAGCCACAGCAGGGGGAGGCCATGCTGGCCAGCTTCAAGCCCCGCGGCTACTCGGAGTGCATCGTGACCGTGGGTGGAGAGGAGAGAGTTTCGCGGAAGCCAACGGCAGCGATGCGATGTATGTGCCCCCTTTACGACCCCAATCGGCAGCTGTGGATCGAACTGGCCCCTCTAAGCATGCCCAGAATCAACCACGGGGTCCTCTCAGCAGGGTTTTTGTTTGTATTTGGAGGCCAAGATGAAAACAAGCAGACCCTGAGCTCAGGAGAAAAGTATGACCCAGATGCAAATATGTGGACCGCTTTGCCACCAATGAACGAGGCAAGACATAATTTTGGAATTGTGGAGATAGATGGTATGCTGTACGTTCTAGGAGGAGAAGATGGAGAAAAAGAGCTAATTTCCATGGAATGTTACGATATTTATTCTAAAACCTGGACAAAGCAACCTGATCTGACCATGGTTAGAAAGATTGGCTGCTATGCAGCTATGAAGAAGAAAATCTATGCCATGGGCGGAGGATCCTACGGGAAGCTCTTCGAGTCTGTGGAGTGCTATGACCCCCGGACCCAGCAGTGGACCGCCATCTGTCCCCTGAAAGAGAGGAGGTTTGGCGCGGTGGCCTGTGGAGTTGCCATGGAACTGTACGTGTTCGGGGGTGTCAGAAGTCGCGAGGACATCCAGGGGGGCGAGATGGTGACTTGCAAGTCGGAGTTCTACCACGATGAGTTTAAAAGGTGGATCTATCTTAATGACCAGAATCTGTGCATCCCGGCCAGTTCCTCTTTCGTGTACGGAGCCGTCCCCATAGGCGCCAGTATCTACGTCATCGGAGATCTCGATACAGGCACCAACTACGACTACGTGCGCGAGTTCAAAAGGAGCACGGGAACCTGGCAGCACACCAAGCCCCTGCTGCCCTCCGACCTGCGCCGCACGGGCTGCGCGGCCCTGCGCATCGCCAACTGCAAGCTGTTCCGCCTGCAGCTGCAGCAGGGCCTCTTCCGCATCCGCGTGCACTCGCCGTGACGCGCGGCCGCGGGACGCGCAGCTGCTGACCTCGCGCCGGCCTCCGTGCGGTAACGCGGGTGGTTTTCTAACGCTTTGAAGCCTGGGCTTCAGCTCTTGTTCCGGAGAAAACGTAAACTGCTGGAAAAAAAACTACCGAGCGGGGGGAATCCGTTTCTCCCGTAGGTGTGTCCCTAGACCAACCGGGGCTAGTCAGTGTCCGAAGAAAAGGGAAGTGGGAATCCTATCGTGTAAAATATGGAAGTTAAAGCCCTAAGGTGCATTTTCCCCGAGGGGATCTCCTGTCTGACTGACCGGTGTGTTCAAGTACCTGGCTTTGGTTGGGGGAAAAAAAAAATCCGTATATGCAAATCAACATATCCAAACATACCGGAATTGCTTTTCCACTGCACTTGGAAGGAGATATTATGCCTAACTCTGCCCAACCATTAAGGGTTTGTGCCTAAAAATGTTAGTTTGGACTCAATGCCAGTTAGTCTCCATTTAACTACTAGTTCTCCATCCTAAGAATCTTTTTTGAACTAAATTATGATGAATCAAAAAACTAAGATAAAATTTCTCTTGTATGACATTCTATCTTAGTAATCTAAAGGGTCAGTAAATTAAGGAGTCAGGTGGCAGCCCTCCTGTGACTTTAAAGGAAGTTCTAACTTCTGTGTGATTTCAGATGAAGATGCGGCAAGCTGTCATGTCTGGGGTTGAGAAGGATCTCCTGCAGTGCCATTCTTCCTTTTCAACTAAGCAGAACCATTTTATAAATCTGAGGACATTAGTAAGTAGGAGATTTTATAAAAGAAGGACCCGAGTCGGACAAATAATAAAGGTCTGCTATGACCAAAAAAGAAAAAAAAAAAAAAGGTCCAGAGAAAACATATAGGGATCAAAAACTTACAAAAAAAAAAAAAAAAAACCTGCCTGAAAGCACACAGTCTTGTTTACTACTGTCTAGGGTTTGAAAATGTCTTAGAATGCGAATCCATGGTAAGAATCAAGCCTTTGTAGCAGAATTTTCTCAATGCCGTTCACTAGTACGAGTTTCTGACAAATTACATAACAAGTAAAGTTTGGCTGGTAGAATAAACTACCTCAACTTAATTTCATTCTGTTCATAGTAGAGCAAATTAATCCTTTCCTCCTTCCCTCTCTCTCCATGTCAACCCACATTGACCCCACTTCCCGTGGGGGGAAAAAGTCTAGTCATTCGTGGCACTTAACCTTGTAAGATACTTTGTTTTCCATTTGAATTATGCCACTTTCATGTGAAACCAGGGACTTCAAAGTGACTTTATCATTTGAAATTTATGCAATATCAGGTTTCTAATCAGTATAGAGGTCTTTATTTCTAATTGTTTTCTACAGCTTTTTTTTCCCCTCCCTCTTAGTATGTGGCTCTAAGAAGCAGCATTTAGTCTTAGAGATTAACGAACATATCCTTTGGTTATAAATTTGAGAATAGGAATTTCTTCTGGAAACTTCTGCCTAGAATGTTCGTATGCTTTTCACATGCGTATGAAACATCACTTGCGTTCCTCCACCCAGGGGCAGTAGAAGGGGCACCTGTGGGCAGTTTTTTTTCTTCTACTTGTTAGAAGTCAATCCAGTGCTAGAAAAGGTCGCTGAGCAGCCTTGCTGTGGGGATTCTGAAGAACGCTGTGTGCACGTTCGCTCTCCATCCTGGCAGAAGACGCGGGTCACAGAGGCACGGGGTTTCCATCTCCTCTATCAGAGGCACGAGGCCACTCACGTAGCAGATCTGACCCCTAAGTCAAAGCCAGCCTCTGTGCTTCGTGCCGTGTACCAGTCAGCTGTTGTCTGCACGCTTTCCCCAGGATGTCTTGGATGTCTTTTAATCAAGGCAAACTACATGGCCACTACAAAGAAAGAAAACTTTCTTTGTACAACTAGATGTTAATTTTATGGGAAATAAACTGCCGAAAGAGTGGGTTTTCTTTGGTAAAATGCCCCGTACAGAACAGAACCTTAGCCTTCAGAAGCCACCACTGAGGTACATTAAAGTGGTAACCGATGTCCTGTTAAAGCTGTGACAGTCAGCAATTCTCTTTTCTTTAATTTCTGAAGTTTAAAGTTCTTTCCAGGCTACGCCAGGCCTCTCCAAGGAGACAGTTCATTGTTCAGGAGTGAATGAGTCCCTGTTGCAATACATCAGTGCCTGCATGACTTGGTCAATTCATTTTATAAAAGTTTTATTATTATTTAGTTCATTGACACTGTAGCTGCAAAAGTTAGGTAATGTTTTCTAAAAGTAAATTTGCCACATAATATGGGATGCAATAACCAACAAAAGCTGCTAAGTGCCAAACTTATTTTATTATATATAAATATAAAAATATCACATTGAAGTTTCGAGATGTATTTAATTTTATTATGTTTCAAAATGAATCATGACTTTCTTGTAAATCACGGTTACATCATTATTGTGAAGTAAATTTGAACTCATTTCATGCAGGTTTGTGTTTTAACCATCCACTTATGCCTTGAAACATCCTTTCTTGGTAAAT EMBV3_26118 CACTTACATCTACAGCTGCGAGGAGGTCTTTGTGAACGACTACTGCTCTCTGGCCTGCTT Gene GeneID:531987|MS4A2:XM_002693816:69_cdna Constitutive 0 NULL GeneID:531987 15 GENE MS4A2 NULL membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide) EMBV3_37473 TTTCCACTCGTGGTTAATCTATTTTCAATTGTGGTCATCCCTTACACCTCTCTCTATTGA Gene BVV0102_049352 + 0 NULL GK000001.2:19089435-19365391 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04870 ACATGTTCTGTGAACCGTCAGAGCCTGGATTATGTTCTATCTCAACCACAGCTCGGCAGG Gene GeneID:618076|MOGAT3:XM_002698120:407_cdna Constitutive 0 NULL GeneID:618076 25 GENE MOGAT3 NULL monoacylglycerol O-acyltransferase 3 EMBV3_03652 GCTGCCCTTCTGTGGCCCCGATGTCATAGACCACTTCATGTGTGACTTGTACCCTTTGTT Gene GeneID:781435|LOC781435:XM_002693727:451_cdna Constitutive 0 NULL GeneID:781435 15 GENE LOC781435 NULL similar to olfactory receptor MOR232-9 EMBV3_43501 GAAGGTTTCCATTTAGAAGAAAAAGTGTTAAAACAACCTAACCCTAAGCACCACCCCCCC Gene GeneID:530263|RFFL:XM_002695631:44_cdna Constitutive 0 NULL GeneID:530263 19 GENE RFFL NULL ring finger and FYVE-like domain containing 1 EMBV3_18248 GACTACATACACAAGAGCAAAGAAGTTCATTTTATCTAGTGCCTTTTTAGCACAGATTTT Gene GeneID:509630|LOC509630:XM_002689928:67_cdna Constitutive 2 NULL GeneID:509630 8 GENE LOC509630 NULL similar to without children CG5965-PB EMBV3_31831 GTGTTTGTGGTGGGGGTTGGGATGACCAAGATTCAAGATAAGGCTAATCCAATTGATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08971 GAAGAGGATGACATTAGTTCTCCCAACAACCCTGCTGCCTCCATCTACACTAGCCTGAAG Gene GeneID:790004|LOC790004:XM_002685825:69_cdna Constitutive 0 NULL GeneID:790004 3 GENE LOC790004 NULL similar to UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IV EMBV3_34964 AACTGACTGTGATGAGGGTGGGGAGTATGATGGGATGCAAGACGAACCCCGGTACATGCT Gene GeneID:521730|EEF2K:XM_002697990:69_cdna Constitutive 0 NULL GeneID:521730 25 GENE EEF2K NULL eukaryotic elongation factor-2 kinase EMBV3_15798 GAAAGATCAGTTCTCCCAGCAGCCACCATCGCCCTGAATGCCTTTGCTTGGTCTGTCGAT Gene GeneID:516017|L1CAM:XM_002699710:88_cdna Constitutive 0 NULL GeneID:516017 X GENE L1CAM NULL L1 cell adhesion molecule EMBV3_29311 CATTTTCTGGATTCAGGAACGCTTCTACGAGTCGGGCAACCGCGCCAACATCTGGCTGGT Gene GeneID:537692|MBLAC2:NM_001099079:15_cdna UTR3_Alt 2 NULL GeneID:537692 7 GENE MBLAC2 MGC152119 metallo-beta-lactamase domain containing 2 EMBV3_39505 TTCTGGAGGAGCAAGGTAAAGTACATCAAGCAGACCAGTGCAATCCTGCAGCAGCGTTAC Gene GeneID:535203|NTHL1:NM_001046397:237_cdna Constitutive 1 NULL GeneID:535203 25 GENE NTHL1 MGC137409 nth endonuclease III-like 1 (E. coli) EMBV3_13259 CACGCCGATGGAAGGCCTGACCACATCGAGCCGACTATTTACCCTGGAACCAACCAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11967 ATCTCTGTTGCAATTGGACATTTATTTGCAATATATTGGGTTGGACCAATCATAGGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28098 ATTTGTGAATGCCGCGACGGGCAGGTCACCTGCTTCGTGGAGACTTGCCAGCCGGCTGAC Gene GeneID:515860|PXDN:XM_002683948:5_cdna Constitutive 0 NULL GeneID:515860 Un GENE PXDN NULL peroxidasin homolog (Drosophila) EMBV3_27103 GGTGGGGGGAACCATTCATTCTACTTCCCTTTGGGGCTTAGGAACTCAACCCACGTATGA Gene GeneID:540455|LOC540455:NM_001099109:162_cdna Constitutive 1 NULL GeneID:540455 19 GENE LOC540455 MGC160119 hypothetical protein LOC540455 EMBV3_24541 CCCAGCAAAGATGGGTTTAATTTGGCATTAGCCTAGAATTGCCGCTTGGGGTCTGCAACC Gene GeneID:100300478|LOC100300478:XM_002695237:29_cdna UTR3_Alt 2 NULL GeneID:100300478 18 GENE LOC100300478 NULL similar to sialic acid binding Ig-like lectin 5 EMBV3_03960 GCCCTGTTGGGCAAAATCAGGACCGATGGAAAGATCTCAGAAGAGTCAGATGCAAAGCTG Gene GeneID:282578|ATP5A1:NM_174684:26_cdna Constitutive 0 NULL GeneID:282578 24 GENE ATP5A1 MGC139059 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle EMBV3_00889 AAGTTTCCACAGTATAGATTTCAAGAGGCGGACTGGGGGGCTGGATCTCCCAGAGGACTT Gene GeneID:616045|DOCK9:XM_002691970:29_cdna UTR3_Alt 2 NULL GeneID:616045 12 GENE DOCK9 NULL dedicator of cytokinesis 9 EMBV3_37560 GGTGGTGCCCAGGCTTCCTACATAAACCCAGTTTGCTGTGAACCTTCAGACCGGCTATAA Variant GeneID:510813|LGALS9:NM_001015570:235_cdna 76^167 3 EMBV3_27243 GeneID:510813 19 GENE LGALS9 MGC129126 lectin, galactoside-binding, soluble, 9 EMBV3_22053 AGAAGTGTTGGTATCCATTCTGGGGGGCTGCCTCTTTCCTCATTTCCGGGATCTTGGCAA Gene GeneID:506215|MS4A10:XM_002699256:290_cdna Constitutive 0 NULL GeneID:506215 29 GENE MS4A10 NULL membrane-spanning 4-domains, subfamily A, member 10 EMBV3_09462 ATGAAGACTTTTCTGCTAACTTTGGCTGCACTGCTGCTCTCATCCCAGGTCATCGCAGAC Gene GeneID:785417|DEFB122A:NM_001102339:1393_cdna Constitutive 0 NULL GeneID:785417 13 GENE DEFB122A NULL beta-defensin 122a EMBV3_12312 AAAGAGAAGCATGGGTACAACATGGAGCAGCTTCCTGATAAATCTATAGCAAGTCTGGTG Variant GeneID:506525|RCOR1:XM_002696778:475_cdna 319^480 2 EMBV3_20230 GeneID:506525 21 GENE RCOR1 NULL REST corepressor 1 EMBV3_31989 AGCAGAAAGTTAAGGACGGGGCAGCCTGGCGTGCTGCAGTTTATGGAGTCATGAAGAGTT Gene BVT0102_281449 + 0 NULL GK000026.2:42228683-42407971 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18306 AGCTGAATCCCCAATACCTTGGCCATCTCATGTGGAAAACCTGACTCACTGGACAATACC Gene BVT0102_051137 + 0 NULL GK000008.2:32667001-33415356 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31374 CTCAGAATAATTCATCTCTTCAAGCAGACTTGGCTTTGAGAAAAGCTTGCTGAGTTGGAC Gene BVT0101_012423 - 1 EMBV3_23418 GK000002.2:58712392-58797479 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105352 TCONS_00105347 TCONS_00105359 TCONS_00105350 TCONS_00105346 TCONS_00105348 TCONS_00105349 TCONS_00105351 1 XLOC_062555 Coding TCONS_00105346 XLOC_062555 Coding Coding SPOPL 2:58793287-58847138 j TSS77769 4892 1 TCONS_00105346_3 392 0.0650040883074407 12 0.909377901578459 1.05103074640422e-09 8.84118056499004e-80 1.93907476415635e-05 0.000147305154224491 8.52481450495618e-06 6.74556006121124e-25 8.31304897330336e-32 4.72258964271544e-24 8.06506867271146e-05 0.000343961185758719 0.000322223223606759 0.000258581169635774 8.08119778951687e-08 6.18454628009517e-05 7.23369228749116e-05 0.000743452911237708 2.45868166609667e-10 1.9696790276635e-06 3.85122347037863e-05 0.000151121347843369 6.77518536749036e-06 2.09477641104336e-28 7.80500551154152e-09 0.000467640638971585 8.57981897941805e-05 3.24571507599896e-26 3.83060079157078e-14 1.1378082729783e-14 0.000164431238841026 0.00044297735697114 XR_230330.1 SPOPL PREDICTED: Bos taurus speckle-type POZ protein-like (SPOPL), 0.0 6868 100.00 0.778209321340965 NM_001001664.2 SPOPL Homo sapiens speckle-type POZ protein-like (SPOPL), mRNA. 0.0 2340 91.05 0.324816026165168 TCONS_00105346_3 sp|Q6IQ16|SPOPL_HUMAN SPOPL_HUMAN Speckle-type POZ protein-like; 0.0 779 97.96 0.997448979591837 2 coding 0 0 0 0 0.0467474735570864 0.781969178790159 -0.00180447278058077 0.970522783695843 GCGGGAGCGGCGGAGGCGGCCGCCCCTGGCGGCGGGTTTGTTTATCCCGGGGAAGAAGTTTAGGAGCGGGAGACAGGGGAGAAGGGCGGACTGGGGAGGAGGGATGCGGCTCGGCGGAGGCGGTCGCCACAGGGACTCGCCGCCATCACCTCAGCCGGAGAGGAGCCGCCGCTGGGACTGCCCGCCGCTACCCCTCACGTCCGGTAAAGTACTCACCTGTGTGGGATATTGCATACATCTTAGAAGACTGCAATAAAGTGGCAATGTCTCGGGAACCCACCCCACCTCTCTCTGGAGATATGTCTATCGGTCCTATAGCAGAAAGCTGGTGTTATACACAGGTTAAAGTAGTAAAATTTTCCTACATGTGGACCATTAATAACTTCAGTTTTTGTCGAGAAGAAATGGGTGAAGTGTTAAAAAGTTCAACATTCTCATCTAGCCCCAGTGACAAAATGAAATGGTGCCTGAGAGTAAATCCAAAGGGATTAGATGATGAAAGTAAAGACTACTTGTCGTTATATTTGCTTTTAGTCAGCTGTCCAAAAAGTGAAGTTCGAGCAAAATTCAAATTTTCCCTTCTGAATGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATATCGATTTGTACAAGGGAAGGACTGGGGTTTTAAAAAATTCATTCGAAGAGATTTTTTGCTTGATGAAGCTAATGGTCTTTTACCAGATGACAAGCTTACATTATTTTGTGAGGTGAGTGTGGTCCAAGATTCAGTAAATATATCAGGACATACTAATACAAATATGTTAAAGGTACCTGAATGCCGACTAGCAGAAGATTTAGGTAATCTCTGGGAAAACACAAGATTTACAGATTGCAGTTTTTTTGTGAGAGGACAAGAATTTAAAGCTCATAAATCTGTTCTTGCAGCTCGATCCCCAGTTTTTAATGCCATGTTTGAACATGAAATGGAAGAAAGTAAAAAGAATCGAGTGGAAATAAATGATGTAGACCCTGAGGTTTTTAAAGAAATGATGAGATTCATTTACACAGGGAAAGCGCCAAACCTTGACAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGTGTGAAGAAGCTTTGTGTAGTAACCTCTCAGTAGAAAATGTTGCTGATACCCTTGTCCTTGCAGATTTGCACAGTGCAGAACAATTGAAAGCACAAGCCATAGACTTTATTAATAGGTGCAGTGTACTTCGACAGCTTGGGTGTAAAGATGGGAAAAACTGGAACAGCAACCAAGCAGCGGACATAATGGAAACATCTGGGTGGAAGTCCATGATTCATTCTCACCCACATTTGGTAGCAGAAGCCTTCCGAGCACTAGCATCTGCACAGTGTCCACAGTTTGGTATTCCACGAAAACGGCTAAAACAGTCTTGAAACCTTCCATGAACTGTAGAAAAATGGAATTGACTTTTACTCCTCCAGGTCCAGAAGGATTCTAATACACAAACCATAAGCGAGAGTTGTTTCTGTTGTTTTGTCCACAGAACAGAAGCTGAAAAAGCATATTGCTTGCATTTCAGGTATTTACTGAATCCTAATATGCCAAGAATGATTCGTATTTACATTGAACAAACACTGTCAAATAACCATTTGTTATCCACATCAAACTGAAGTTTGAAAAGATGGTATTTTCAGATATCTTCATTTCTTCTTTTGTAGTTTGAGTCTTTGTTGTATTAAGTTAAATTTAATATTGAAAGACTACCTTGGGATAGAAGAAGGATTCTTAGATATGAATGGACTCTGTCCTGTGTAAGAGTATTATAGGGAGTAGAAAACTATGTAAGAGTATTACAAGGAGCAGAAATTCACTTCTTAGCTAAACCATAAGATTGAGCCTTTTAAATTTACAGTGTGCAGCTTAAAAAAAAAAACACATACATACACACTTTAAGGATTTGAGATTTTGCCAGGGTCTTAGAAGAAAAAAATTCCTCTCTCAGGCCCTAGAATTTTGTTGTCACATATTAAAAAAAAAAAATACTGGTGTATCCATTTATATCAAATGCACACAGATGCATTGTGAATTAATTCACTGCTTGAATCTACATTTCTAACCATAGTGACTTCAGTGGTAACATCTATAATGTACATTTCAGCTTACCCTTACTTTTGTGTTTATTGCAAATCTGAAGGGTTTTATTATAAAGATTTTTTTTTAGTTTGGTAACACATTTTGTACCAAAAATGTCAAACACTGTGCTGTAAGGATATCCACGTTTGTAGAAATGTCCACTTTTCAGATAATTTAATGCCTACCAATTATATTAACAGAATCACATGGTAGTTGATTTATTTTTTTTATTTATTATGTATATTTTTGGTATTGTGGGTTCTTGAGGCATTGTAAAACTGTTAATGTATTCTGAAATGAGTGTTCTAATAGCCTTTAAAAAAAAAAACAACTATACACATGGTTTTCAGTAGACACAGATTTTGTTCCAAGCAGTGTTGCCTTTTGAACTAAAGCCTGCTCCTGTTTCCCTTTTGTCACCTAAACAGCTCTTTCTTAGAAAAGTAGTTACTGGTCTTAACGTTACATATTATAAAAGTAACCATTGGAGAACTGTTAGATTGAGATACAGAAACACTATATTTGTGCCTTTTTCATTTTTTAATTTTAGTGTGTATCGGTATTTGGAGCACAAATATGAAGGTGCCATCACATATGGCCTGCCATTGTTACCTCCTTGAATACTCATGTGTCATTGTCTTGAAATAGTAATTGGAGATCCTTGCATGTATTATGTGGTCATTAGGCATGTGTGTGTGCGTGTGTATGTGTGTCTATGTATATTTGCTTGGATTTGTGTGTGGTATGTTCAAAAGTGAATTTCTGAAAATAGGACTCAGTTAAATGTTGAAAGTTTAGGTTAGTTGAAATGTATTCCATTTAAATGTGCTTTATTTGGGGGGACAATTGAGGAAATTATAATTCTCAAAAATGTGACCAATTTACTGCATGATGAAATGTGAAAACAGTGCCTTTTTAGGACATCAGTTTTGAAATTGAGTTTAAAAATATAATGAAGATCTCTTAAAAATTTGTCATGAACATTAATGTTTTATTTTTAAACTAAATTTAAGTTAGAGCTTAAATTGCCAGACATGTAATTAACTAATTTATTTACCCATTTAAGTTTTGTGCATAAATTCAAAATCTAAGCAGAATCTTTGTATGCTTCCTAGTGTTAACTAAAATAGAACACTAGGGACTTCAGTAAGTTGTTTTGTTTAAGTCCAACTCAGCAAGCTTTTCTCAAAGCCAAGTCTGCTTGAAGAGATGAATTATTCTGAGTTGGATGTTCATGCTCTTTGATGGGTAAAATGAAAATATTCAGTGTATTCTTGGAAAACAAGGTGGGTGGGTGGGTTTTAGTGTTTTCAGATTATAAAGACAGCACTTTCAGCACACATAAGAGTATTTTGCAAACCTCTTTTATACAGATTATGAGCTCTACTTTGTTTAAGTGTTAAAATGGAATGATGTAAATTTTAGGTGCAGTTGAACAAATATTGAGTGCCTACCATGCGAGATTTCCTCTTCACTAAGAATGAAATCACCACACCGTGTCTTCTGTTTGCAGTATGTGGACTTTACGTTTGAAAAAGAATTCTTATATTTAAATCTTTTTTTGTTGTTAGAGTTTATCATTGTATACTGTAACCCAGTTAATTTTTGCCTTCAGTTTTTTAGAATGAAAATATAACTTGAGTCCCATTTTTGAAAATAAAAGTCTGCTGAAATTATTTAAAAATTAGTTCTGGGGGGAATTGATTTTCAAGATTCAAATGTATAAAGACACATTGAACTTTTCAGCCTCATTTTTAATCAAGCTGATGTCAATGATGAGATACATACTTTTTGTATCTTGTTGCTGAAAATATTTTTTGCATTTCAGCACGTTGAGTTAAAATAAAGTTGTTACTACTTATTCAGAATTATTTGGTTTATTTTGTGTTTATTTGAAAAGTATGAATGATTCTTTTTCAGATTACTGTGATGTTTTACAAGAAGAGCTATGTATTTGATGTGGTAACCTTTAGAATTATGCATAGTAATTGTCTTTTCTACATAGGGAAGCTAGTGTTTTTTTGGAACCTACTAAAGACCTGTTCCTGGGGATATTGCATATGTGTGTATTTGCTTCCCTCGTGGCTCAGATGGTAAAGAATCTGCCTTCAATGCAGGAGACCAGGTTCAGTGCCTGGGTAGGGAAGATCCCCTGGAGAAAGGAATGGCAACCCACTCCAGTATTCTTGCCTCGAGAATTCCATGGACAGAAGAGCTTGGTGGGCTACAGTCCATGGGGTCACAAAGAGTCAGACACGACTGAGCGACTTTCACTTTTCACCACCTTTCTTGAGTGACTTAATGCTCATATTATGTAATTTAATGTAGCACTTAAATATTTCCTTTCCCTGGTCCTCCTACCCCTTTTTAATTGCAACTAATTATTTGCTGCTGTCAAAAAGAGCAACTTTTGGACAGCATATTACTGGGCCAACTTGGTAGCAGCAACATAATTAGTGCTTAAAAATTATGGCCAAGAACTTCTTAGCTATCCAGTGGTTAAGACTCTGCCTTCCAATACAGGGGGCGTGGCTTCTCTCCCTGGTGAGGAAACTAGGATCCCATATGCCACAAAATGTGGCAAAAAATTGACATACAAACATACATATATGGCCAAAGTGACAGAAATGTACAGTGAAAAGTCTATATACTCAACACACACATACACACACACTGAATTATCCTTAAAATAATAAAAGGGTTGAAACACTTAAATATTACCTATACAACTACAGTAAGATAGGACAAGT EMBV3_24564 CTGGACCGCTCTTGTTCACCAGGTCTCAGTGACTCATGAGAAGAAACTGGGTCAGTTTTT Gene GeneID:505469|FOXN3:XM_002691110:28_cdna Constitutive 2 NULL GeneID:505469 10 GENE FOXN3 NULL forkhead box N3 EMBV3_06863 AGATGATCCCGTGTGTTCTGCCTCTGTATCTGAACTTTTGAAGGGGACGCTCCAGCTCGA Gene BVV0102_276110 - 1 EMBV3_17259 GK000009.2:96232091-96258010 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236380 TCONS_00236386 TCONS_00236385 TCONS_00236389 TCONS_00236383 TCONS_00236381 TCONS_00236379 TCONS_00236387 TCONS_00236384 TCONS_00236388 TCONS_00236382 1 XLOC_144449 Coding TCONS_00236382 XLOC_144449 Coding Coding TULP4 9:96212106-96382571 j TSS176960 3584 1 TCONS_00236382_7 498 10 0.979033696264314 0.000366505231529365 0.000240926694201653 0.000101846646880286 0.000724045078051224 6.26869900835326e-86 0.000213615186070116 0.000196717296303817 5.27144268516781e-05 0.000206131607908978 5.89729969316306e-05 4.93414557774522e-38 0 5.63667046143531e-05 0.000411518327199591 0.00037801585273184 1.58867477076117e-06 1.91973482786872e-34 2.75240782381908e-52 3.17516173303123e-05 0.000816158406898764 2.15191456240455e-147 0.000102487902199759 6.47179083416699e-155 0.000358596953144868 2.00108373816424e-95 1.09744362856028e-143 3.91905478668201e-74 5.16049315077824e-05 5.68937224056659e-05 6.92053188223525e-05 XM_002690367.3 TULP4 PREDICTED: Bos taurus tubby like protein 4 (TULP4), mRNA. 0.0 6221 99.97 0.962890625 XM_005267057.1 TULP4 PREDICTED: Homo sapiens tubby like protein 4 (TULP4), transcript 0.0 3456 82.59 0.960658482142857 TCONS_00236382_7 sp|Q9JIL5|TULP4_MOUSE TULP4_MOUSE Tubby-related protein 4; 0.0 988 96.36 0.991967871485944 2 coding 0 0 1 1 -0.035625153849362 0.794682181001815 -0.0469818719137106 0.425534972018371 GGGGAGAGTTCTGAAGAGGCAGGACCACACATGGCAATGTGTTCTGTGGAGTAGATTTGTCAGACTCCAGGGCCTTCAAGCTGTGATTAATCTGATGGTTCGTGAAACAACTGGGAAAACAGATGTTTTGTGTGCCATTTGAAGAGTGTGTGTCTATGTATATTTAAAACTTTCTTTCTATACATACACATTTACACGAGAAGACAGGCTCATTCTTGTGCTCTCTTGAAGAGTTTTACAACTGATGAAAATTAATTTAAGAATCAGATGGAGCAACTTGACACCACTGGGCTTGGGAGCCCGGGGAGAGAAATACATCACTAATGGCCAGTTTTCCATATGGTCTTCACGGGTAAAGAAAGTTTGCAAAAAGAAGAGAAAAAAAAGCTTGCACAGATCAAGCCTCAAAAATACCTCTCCAGTTTAAAGAAGGAACTAAGTGAGAAGGTGACTGAGGGGGAAGTGTGATTTCAAGCTTTGCAGGTGGAAGTGTGCCGTGCTTTTTGCGCTTTATTTTTCAGTGGGTCTGGTGATTTGGACAGACGTTAAGATTCAGGACTGAAGGGTGGCTCTCACTGTGTGCTTATGACTGGAGGAGGCCAGCCAGGGTGTGATGGGGCAAGTTTGAACAATGAACTGATTCCTTTGCCTTTTTTCAGTTAACTGAAAAAAGTCCAGAAATTTTAATTTATTATTTCCCTTTTTCTTGCCTGTATCTGTAGGATAGTTCCTTAAGGTAGCAATTGAAACTGCTAATCACAAAATAATTATCAAGGCGCATCCTTGTAAAGCTTTTTTCCTTGGACTGTACCCGGGGCATTTGGAGACGGTCTCTGAAGGTGGTCAGGAGAGTGCCCTTCAGACAGCACAGTCACTCTTCAGGGAGATAGTGAGAAAAGAACCTGACTCTTGCCTGTGTTTCCATTTTAAGGGGTTCTCTCCCGTGTTGAGTCCAGGCATACTTGCATGTAAAAGGGGGACCAGTTCATGGACTTAATTCTGGGATTAGTTTTTTCCCTTCAAGATGGAAAAGCACGTCATCCTTAAGAGCAGAAAGGGGAGGAGTGACTAGGGGAGGGAGTACGGAGACCTCCTGTAGCCCAGCTGGGCTACCCTTTGTCCACACACGTGTTTAGATTCACTGGAGGCCCACGCTCCCGTAGAGCCCTGGAACCTCCTGGCTCTGCTGGGGGCAGGGGCTTCCTCGCCTGCCTCTATGGCCCCCAGGGCTGCGTCAGCCTGTGTCACGGCCCTCCCTGGGGACACAGCCACCTTCTGGGAAGCCCGGTTGGGCTCTGAAGTTGGAGGTTTCTGGCTCTGAACAGCGAGGAAAGAGTTTTTTTTTTCCTCCTAAAATTTGGACTGCTGTCTGCACAAACTCTAGTCTGTTTTGCACGGTTTGTGTGCCTTTTTCCCTTTATGCAATCTTCAGCTTTAGCAGCAGAAATTTGTCTAGCTGAGAAAGCAAGCCCGAGGGTGGCTTCAGAAAGAAGATGATCCCGTGTGTTCTGCCTCTGTATCTGAACTTTTGAAGGGGACGCTCCAGCTCGAGGGATTCTTTAAGCCTTAAGTTACTTGAAATCTATGTATTTGCAGCCCTTTGTGTCTGGAATCACATTACACTAAACTGGAATCTCAGGCTGAATAAGAAGAACCAAGTGAAAAGAACACTCAGTTTCTTTATCACCACTTGTCAACGATGCTCTTTCTCCAAAGGGTCACCCGGCGCTTCCTCTAAGGACTTGAAAATAAAAATGGCCGCCACGTTTTTTTTTAAGCATTATCTTTTCTTAGCAGACTGCCATCATCTTTTATAGAGGAATTTTTCACTATGCATTTGGTGGAGCTTTCTAAAATACTGACCTTCTAATTAGAATGAGGTCAGTTTCAATTAAAGGGGTCAGGCTAAACAGCGCAAGCCAACCACAGAATTAACACCAGTCAGTGAGAGCAATTGGTTTAAATTTTTCGGCATTTAGCCTTGCTCTTTAAGTAAAACGGTTCTTCCAAAAAAAGTATGTATGCAGCGGTGGAGCATGGGCCTGTCCTGTGCAGCGACTCCAACATCCTCTGCCTGTCCTGGAAGGGCCGTGTCCCCAAGAGTGAGAAGGAGAAGCCCGTGTGCCGCAGGCGCTACTACGAGGAGGGCTGGCTGGCCACGGGCAATGGGCGCGGCGTAGTTGGGGTGACCTTCACCTCCAGCCACTGTCGCCGGGACAGAAACACTCCACAGAGAATCAACTTCAACCTGCGAGGCCACAATAGTGAGGTTGTGCTGGTGAGGTGGAACGAGCCGTACCAGAAGCTGGCCACATGCGACGCGGATGGCGGGATATTCGTATGGATCCAGTACGAGGGCCGGTGGTCTGTGGAGCTGGTCAATGACCGAGGTGCCCAGGTGAGCGATTTCACGTGGAGCCACGATGGGACGCAAGCACTGATCTCATATCGAGATGGGTTTGTCCTGGTTGGTTCTGTCAGTGGACAAAGACACTGGTCATCTGAGATCAACTTGGAAAGTCAGATCACCTGTGGCATATGGACACCTGACGACCAGCAGGTACTGTTCGGCACCGCCGACGGACAGGTGATCGTCATGGACTGCCATGGCCGGATGCTGGCCCACGTCCTGCTGCACGAGTCGGATGGCATCCTCAGCATGTCCTGGAACTACCCCGCCTTCCTGGTGGAGGACAGCAGCGAGAGCGACACCGACTCGGACGACTACTCCCCGCCCCAAGATGGTCCGGCAGCGTACCCCATCCCGGTGCAGAACATCAAGCCCCTGCTCACTGTCAGCTTCACCTCCGGAGATATCAGCCTGATGAACAGCTATGACGACTTGTCTCCCACCATCATCCAGTCAGGGCTGAAAGAGGTGGTGGCCCAGTGGTGCACGCAGGGAGACCTCCTGGCAGTTGCTGGTATGGAGCGCCCAAGCCAGTTCAGTGACCTCCCCAATGGCCCTCTTCTGAAGAGTGCCATGGTCAAGTTCTACAACGTTCGTGGGGAGCACATCTTTACCCTGGACACGCTTGTGCAACGCCCCATCGTGTCCATCTGCTGGGGACACCGGGACTCACGGCTGCTGATGGCTTCGGGACCGGCCCTGTACGTGGTGCGCGTGGAGCACCGGGTGTCCAGCCTGCAGCTGCTGTGCCAGCAGGCCATCGCCAGCGCCCTGCGCGAGGACAAGGACGTCAACAAGCTGACCCTGCCCCCCCGCCTTTGCTCCTACCTCTCCACTGCCTTCATTCCCACCATCAAGCCCCCAATTCCAGACCCCAACAACATGCGGGACTTCGTCAGTTACCCGTCGGCTGGCAGCGAGCGGCTGCACTGCACCATGAAGCGCACAGAGGACGACCCGGAGGTGGGCGGCCCGTGCTACACACTCTACCTGGAGCACCTGGGCGGGCTGGTCCCCATCCTCAAGGGCCGGCGCGTCAGCAAGCTTCGGCCCGAGTTCGTCATCATGGACCCGCGGACCGACAGCCGAGCAGCTGCTTGTTAGCTGACTGCCGAGAGTAGTGTCCCAGTCATCCATGGAGATCTCGCATGATGGGCCAGCCCGTCCTTCCAGG EMBV3_23209 GTGGTCACACCCATGCTGAACCCCTTCATCTACAGTCTGAGGAACAAAGACATAAGGAGG Gene GeneID:510625|LOC510625:XM_002688675:102_cdna Constitutive 0 NULL GeneID:510625 7 GENE LOC510625 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_22767 GAAAGGCATTCTTATCCGATCCCCACGAAAGGGGCGAAGTGGCTTCCGAAGGACAACTTA Gene BVV0102_427689 + 0 NULL GK000025.2:34043851-34053828 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32546 ATGTGGTGGGATGGATGTGAAGAAAAAGGAACCCTTGATCGGAATTCGCTGACAGTCCGG Gene BVV0102_162360 + 0 NULL GK000003.2:15097680-15106131 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09155 GGGAGTGTCATCTATGTGTATTTTAGGCCACTGTCCATGTACTCAGTGGTGAAGGACCGG Gene GeneID:786664|LOC786664:XM_002691572:72_cdna Constitutive 0 NULL GeneID:786664 11 GENE LOC786664 NULL similar to olfactory receptor, family 1, subfamily L, member 6 EMBV3_26531 ACGTCCGCCCCCACTGCGTTGCATGAGTAAAAGTATATAGAGAAGCAGAGCAACCTAAGT Gene GeneID:511798|FBXO9:NM_001034412:264_cdna Constitutive 0 NULL GeneID:511798 23 GENE FBXO9 MGC128068 F-box protein 9 EMBV3_01804 CCCTAGAAATTCACAACATAGAGGAACGGCAGAAACGCCAGGTGACCCACTTTCAGTTCC Gene GeneID:505220|PTPN9:XM_002696630:167_cdna UTR3_Alt 2 NULL GeneID:505220 21 GENE PTPN9 NULL protein tyrosine phosphatase, non-receptor type 9 EMBV3_33622 GGTCCTGCCCTGTCAAAGAAAGTCAAACCGAAGAAAATTACTGATATTCTTGCAAAATCA Variant GeneID:616567|C1H3orf26:NM_001038215:13_cdna 266^337 1 EMBV3_23778 GeneID:616567 1 GENE C1H3orf26 C3orf26 MGC134033 chromosome 3 open reading frame 26 ortholog EMBV3_37784 GCTGTTTCTACCCTCGGCATTTCAAAAAGGACCACAGGATACTGGTCCCATTCCATCCAG Gene GeneID:505213|HSDL1:NM_001098871:11_cdna UTR3_Alt 3 NULL GeneID:505213 18 GENE HSDL1 MGC152451 hydroxysteroid dehydrogenase like 1 EMBV3_04080 GGCTACAGCGTTTTCTATAAAATCTCCTTGGATCCCATGCCCGAAATTTGGAAGCATATG Gene GeneID:540311|HNRNPA0:XM_002689195:69_cdna Constitutive 1 NULL GeneID:540311 7 GENE HNRNPA0 HNRPA0 heterogeneous nuclear ribonucleoprotein A0 EMBV3_30182 TCTCTGAAACGTTGTTTCCCCTTTATGCTCCAACTATTTGTTTCAGCCTCAATGATACAG Gene BVV0102_137205 + 0 NULL GK000024.2:2910447-3673275 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33453 CTACATTGTCATGGAGTCCCGCGAGGAGGGTGCCAGCGACTACGGTATCTGGAAGGAGAT Gene GeneID:100337192|LOC100337192:XM_002688906:188_cdna Constitutive 1 NULL GeneID:100337192 7 GENE LOC100337192 NULL G protein-coupled receptor 108-like EMBV3_07103 GCCCCGGAGGAGTGTGAGGAGACAAGTGAAAGACCCAAAAAGAAGAAAAAGCAAAAGCCC Gene GeneID:404165|NOP56:NM_001033622:814_cdna Constitutive 1 NULL GeneID:404165 13 GENE NOP56 MGC128411 NOL5A NOP56 ribonucleoprotein homolog (yeast) EMBV3_21809 CGGGCTTCTTAGCTGCAGGTCTGATGGCTGTTTTCCATGTTAGTTTTGTAGGTTGGGCTG Gene BVV0102_187257 - 0 NULL GK000016.2:41036683-41137642 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067238 1 XLOC_041383 NonCoding TCONS_00067238 XLOC_041383 NonCoding NonCoding - 16:41073284-41075759 - TSS50599 1347 1 TCONS_00067238_1 39 0.173719376391982 2 0.456345998383185 3.47056381681637e-05 7.83704700302223e-61 8.27943175899952e-05 0 0 7.70115142920763e-05 0.00032674250683836 0 4.49570009021612e-121 1.83273509731541e-05 1.69946947561894e-06 0 0 0 0 0 0 0 2.29024076645386e-05 0.00100903115586087 2.12309106619715e-05 0 0 0 1.77646345731299e-05 3.13828590843364e-05 8.15365410181874e-05 0 3.60401383149641e-06 0 NM_001206453.2 BIVM Bos taurus basic, immunoglobulin-like variable motif containing (BIVM), mRNA. 2e-37 161 84.72 0.106161841128434 0 noncoding 0 0 0 0 -0.182284512623356 0.289308125513265 0.0423698802256791 0.585640351975917 CAGGATCAGAGAAGGGGGTGAGAAGGTTCAGATTGTCTGGATCTAGCTCCTGGATCAGATGATGGCCCTGTCCTCTCCGTGACCTCCTCCAACACCGCTGGCTTCACCTTTCCTGAAAAGAGTGCTTTAAAGATACTGGAGAAATCTGTTTCTTCTCAAGTCAGAATTCTCTCTCCGAGTGGGAGGAAGAGGCGGGGGTCACCATGGGTATTCCCTGCTCTGCGGATTTTTGAGAGAAGACACCTGCTTCAGCTGATAGGCTGAAAACAAGCTGAACAGCTGAAGCTTTTTCTTTTGATCGCTCCCATTAGGTAGTATTTTCCCACCTCACGGTTTGCTGAGCATTGATTTCCACTCAAGATAGAAGCTACCTGAGAGCGTCACTCTTTCCCTCTATTTGTCAACTTTTACTTTTTGTTTAGTCAGGCAACCCCGCAGGGGTGGAATCTTATTCATTGTTCCAAGCAGTGCATCGTCAGAAAACCTGAGTGTGTTTGCAGAGTCCTTGGTGAATAAAGTAACTGTGTCTCGGGCTTCTTAGCTGCAGGTCTGATGGCTGTTTTCCATGTTAGTTTTGTAGGTTGGGCTGTGTCCTCTTGATGAGGTTGGAGGATGAGGTACAGGGGAGAAGAGATAAGAGCACTGCTTTTTTCTTTTCTGCTAACCTAGGCTTTAAAAAAAAAAGATAGCTGCAGAATACTTGAGAGTGTAACCTGGCTTTAAAGTAAGTTCATGCCTCTCCCCACATGCACACTCATTGATTTAGCAGCTGGGACTGGCTGATTGGGATAACTTCTTCATGTGAATTTGCTCTTTGTTGCTCCCTCTCCTGAAGTTTCAACCAGCAACAGTTGAGGCTGCATTTTCCTACCAGACAAGCTTCATTCTGTAGTCAAGAGTATTTAAATACTTTTCTCTTCGGGCTGAAGGATAAAATGGAATAATCAGAAAAAGACAAATCGGTTTCACAGAGTAGAGAACTATGCTTCTTTTACACTTGACACCCAAGCCCTGAAGGTGAATATGATAGAATAAAATAGCTTTATGTAATTGAAAAACTAAATTCATTCTGAAAAAGCTTAATAGCTTTTAAGAGAAATTGGTTTACATAGTTCGTGTGTTTCTCCATTTTCAGTCCAGCAACCAGAGTGATAGTTAAAAAAATAAATCACCCTTTCTACCTGTATTGGGCTTCCCTGATGATCCAGTGGTAAAGAATTCACCTGGCAATGCAGAAGGCCCAGGTTCGATCCCTGAGTTGGGACAATTCCTTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGGAAATCCCGTGGAGAGAGTGTTACAGAAACCAGT TCONS_00067229 TCONS_00067230 TCONS_00067231 s 3' 36603 TCONS_00067229 TCONS_00067230 TCONS_00067231 s 3' 36603 EMBV3_20742 GACTGGACTAGTTTAAAAGTATTTTGCATTATTTGGAGTGGGATGTCATTGGCCCTGCTC Gene BVT0102_346827 + 1 EMBV3_42579 GK000015.2:17984029-17999931 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058409 TCONS_00058406 TCONS_00058408 TCONS_00058410 TCONS_00058407 1 XLOC_036088 Coding TCONS_00058409 XLOC_036088 Coding Coding CUL5 15:17869060-17987172 j TSS44009 4449 1 TCONS_00058409_3 759 20 0.962501375824436 2.0947697472398e-17 0.000300943524806974 0.000171564546564874 0.000277386808636842 3.63785955832279e-05 0.000101959362594271 5.55385226431865e-06 0.000348915084404027 0.000136448559987075 0.000301470439733761 3.74166821559736e-05 0.00020327369002667 4.49376661871352e-05 3.71438286609831e-05 3.77009031146803e-05 9.02148472827819e-07 0.00074321702529146 0.00140705603066823 8.95523303218439e-06 0.000177963851233609 7.35691636660913e-05 0.000526949014688768 5.51963715824793e-36 1.92395685834348e-08 1.6518750746226e-11 7.27932301048134e-06 1.60726337149655e-05 8.57576965845913e-06 6.61366654412638e-05 0.000127456740938604 XM_005215786.1 CUL5 PREDICTED: Bos taurus cullin 5 (CUL5), transcript variant X2, mRNA. 0.0 5211 99.76 0.652730950775455 XR_246455.1 CUL5 PREDICTED: Homo sapiens cullin 5 (CUL5), transcript variant X2, 0.0 5963 90.03 0.992807372443246 TCONS_00058409_3 sp|Q93034|CUL5_HUMAN CUL5_HUMAN Cullin-5; 0.0 1565 100.00 0.998682476943347 2 coding 0 0 0 0 -0.0562980349653625 0.691556119533027 -0.0282087984931698 0.586891013610624 GAGCTACCCATGGAAATGTAAAGGAGACTATTTGAAGAATAAAGGTTCTCTTCAGTTTGAAGACAAATGGGATTTCATGCGTCCAATTGTTCTGAAGCTTTTACGCCAGGAATCTGTTACAAAACAGCAGTGGTTTGATCTGTTTTCGGATGTACATGCAGTCTGTCTCTGGGATGATAAAGGCCCAGCAAAAATTCATCAGGCTTTGAAAGAAGATATTCTTGAGTTTATTAAGCAAGCACAGGCACGAGTACTGAGCCATCAAGATGATACAGCTTTGCTAAAAGCTTACATTGTTGAATGGCGAAAATTCTTTACACAGTGTGATATTTTACCGAAGCCTTTCTGTCAACTAGAGATTACTTTAATGGGTAAACAGGGCAGCAATAAAAAATCAAATGTAGAAGACAGTATTGTTAGAAAGCTCATGCTAGATACATGGAATGAATCAATCTTTTCAAATATAAAAAACAGACTTCAAGATAGTGCAATGAAGCTGGTCCATGCTGAAAGGTTAGGAGAAGCTTTTGATTCTCAGCTTGTCATTGGAGTAAGAGAATCCTATGTTAACCTTTGTTCTAATCCAGAGGATAAGCTCCAAATTTATAGGGACAATTTTGAGAAGGCATACTTGGATTCAACAGAGAGATTTTATAGAACACAGGCACCCTCGTATTTACAACAAAATGGTGTACAGAATTATATGAAATATGCAGATGCTAAATTAAAAGAAGAAGAAAAACGAGCCCTACGTTATTTAGAAACAAGACGAGAATGTAACTCTGTTGAAGCACTCATGGAATGCTGTGTAAATGCCCTGGTGACATCCTTTAAAGAGACTATCTTAGCAGAGTGCCAAGGCATGATCAAGCGAAATGAAACTGAAAAATTACATTTAATGTTTTCATTGATGGACAAAGTTCCTAATGGGATAGAACCAATGTTAAAAGACTTGGAGGAGCATATCATCAGTGCGGGCCTGGCAGATATGGTAGCAGCTGCTGAAACTATTACTACTGACTCTGAGAAGTATGTTGAGCAGTTACTTACACTATTTAATAGATTCAGTAAACTTGTCAAAGAAGCTTTTCAAGATGACCCACGATTTCTTACTGCAAGAGACAAGGCATATAAAGCAGTTGTTAATGATGCTACCATATTTAAACTTGAATTACCTTTGAAGCAGAAGGGGGTAGGATTAAAAACTCAGCCTGAATCAAAATGCCCTGAGCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACGCCATTAAGCAAAAAGCTAACCTCGGAAGAGATTGAAGCAAAGCTTAAAGAAGTGCTCTTGGTACTTAAATACGTACAAAACAAAGACGTTTTTATGAGATATCACAAAGCTCATTTGACACGACGTCTTATATTAGACATCTCTGCTGATAGTGAAATTGAAGAGAATATGGTAGAGTGGCTAAGAGAAGTTGGTATGCCAGCAGATTATGTAAACAAGCTTGCTAGAATGTTTCAGGACATAAAAGTATCTGAAGATTTGAACCAAGCTTTTAAGGAAATGCACAAAAACAATAAATTGGCGTTACCAGCTGATTCAGTTAATATAAAAATTCTGAATGCTGGTGCCTGGTCAAGAAGCTCTGAAAAAGTCTTTGTCTCACTTCCTACTGAACTGGAGGATTTGATACCTGAAGTAGAAGAATTCTACAAAAAGAACCATAGTGGAAGAAAATTACATTGGCATCATCTCATGTCAAATGGAATTATAACATTTAAGAATGAAGTAGGCCAATATGATTTGGAGGTAACTACGTTTCAGCTGGCTGTATTGTTTGCATGGAACCAAAGACCCAGAGAGAAAATCAGCTTTGAAAATCTAAAACTTGCAACTGAACTCCCTGATGCTGAGCTTAGGAGGACTTTATGGTCTTTAGTAGCTTTTCCAAAGCTCAAACGGCAAGTTTTATTGTATGAACCTCAAGTCAACTCACCCAAAGACTTTACAGAAGGTACCCTCTTCTCAGTGAACCAGGAGTTCAGTTTAATAAAAAATGCAAAAGTTCAGAAAAGGGGTAAAATCAACTTGATTGGACGCTTGCAGCTCACTACAGAAAGAATGAGAGAGGAAGAGAATGAAGGAATAGTTCAACTAAGAATACTGAGAACCCAGGAAGCTATCATACAAATAATGAAGATGAGAAAGAAAATTAGTAATGCTCAGCTGCAGACTGAATTAGTAGAAATTTTGAAAAACATGTTCCTGCCACAAAAGAAAATGATAAAAGAGCAAATAGAATGGCTAATAGAGCACAAATACATCAGAAGAGATGAATCTGATATCAACACTTTCATATATATGGCATAATTTTGAATATCATGGACAATATTAAGAACCCAAATTTTGGAGTGCTTCGGCAGAAAGTTCTTACAGTTTGTGCTAGGGGAAGGTTTAGTTGGACTTTGATTACATAAATATTAAAATCTCTGCCTTACCTAACAAAACAACTATATTTTGCCAATCACATTAGTTAGCATGGTGGCATTCCTTTCATGTTGCACCACTCTGTTTTAACAGCATGCTGTTTTGTGGAGAAACTTGCATTCACAAAGAGCCCATTATGAGCTTTTAAAAACCTGATTTATACCCACCAGAAGAAATAACAGTTGGGAGGGTGAAAGTGGGGTTCTTGTTGCTTTTTTTTTTCTTTTTTTTTCCTCTCTTAGAAAAATGTATTTGCACAAGGAAGGATCTTCAGATGTTTGTGCACTGAAAAATGCTGTTGTGTTTTGTTTTTTTAAAAAATGCAATTAAAACTAGAAATAGCACTCTTGATTTCTTTTGATCAAAAGAGTGAGCTGGTCTACACAACATTGGGACAGGGCAGATATAGATGAAAATTTGGTATCGGCATATTTGCTTATCCAGTACAGGAACACCAAAGGAAGAAGCAATGGAAAGAAAAATTATAGTCTGTTTCTTAAAGTTTAAAATTTGTTGATGTTTTAAACCAGAATTGTTCTCAAAACTTGTTTGGAATTTCTAATCTTTTTCAGTCGTTTAAGAATGAGAGCCATGATATTTTGATTTATAAAGGTAAATTTAATGCAAAAGTGGGTAACTCTAAATCCATAGCAAAGTTTTCTATACAATTTTATAAATTTTTTAATAGCTTATTATGTCCTAGTTGTATATTGGGGAATAGAACAGCAGCAAATACTGTAGACTTACAGTTTTCATTATTTTTTTCTTTATGTATACAAAAGTTTATCTAACTACAATTTGGTGTTCATGAAAATCATTTAGTTGACAAGGTGCCTATTCCATTGTTGAATTTTCTTTAAATATATTTTGACAATAAATTTGCTAATTAAAAATTAAAAAAAAAAGGATCTGGAAACAAAAACCTACCAGCAATTTGCTAAAGGTACAGAATCACTGTTAGTATCCTTTATTAATAAGTCCCTTTTCTCTAATGTGAACTAAAAATTAGTGCTATCTGAGCAGGGATGAAATCTGACATGGTTAAGGGAAAATGTATACAAATATACGTATATATTTTTTTCATGAGCAGTATGGCAATAGGACACTTCAGAGGTTAATTTAAGATTTGAGCATTCATCTTCTAATATAAAGGTGAAGCCATCTTGCAAATGCTAACCTTTATTACCATCTCATTGCCAGAGTAAGAAGATATGAAGCAAAACTTTCCAAGTGAAAATATAGAACAATTTTAATGCTTACAATGAGTTAAATATTTAGAATATTACTGTTCCAGTGATTTAATGAGGATCTTGAAATAAATTCTGAAGTCTTCCAATTTTTACATTTATTGGAGGGATCCCTGCATTCTGGCAAACTTTATTTAAATCTCTTTACTCTTATTTTGTGCATAAATGTTAAAATTTCCAAAAAGGAAATGTTAGCTTTCTTAATAAATTACCTTTTATTAAATTTAATACAAAATATGACTGGACTAGTTTAAAAGTATTTTGCATTATTTGGAGTAGGATGTCATTGGCCCTGCTCAAAGGGCAAATTTTAAAAATTCAATTTGTGTGAAAGATCTGCTAGTTTTCCAGAAAGATTTGCTATCTTAAACTCAAGCTTGTTTTTTCTATTTTCATGTAAATGACTGGGATGCTGTCTTAAAAACTCTTCCAATGTTATGTTGGTGAAATAAACACTACAATGAGAGCTTTCCTGTCATCTACACTATATACGTTGTCTGGAGTGTTGAACAAATTTGAGTTCCTAAGTTGTAATCTATCCTCGTATGGTATATACGATTTTGAATGTGTGCCACTACATACTGAGATGATAATGCTGTACAATTTTAAATGGTAGCAGTTTCTGTATGTAGTAGGCTGAAATATTTTGATGAACTGCTTAATTTTTGGATTTTATTTTTTAAGTTGTATAATTTATTTTCTTGCAAAATAAAAATGTAATATAAAAGC EMBV3_24429 CTTGGCCTGCTAGGGGAGGAGACCCGCCAGCTGTTTGAGTTTGACAGCACCAACATGTCT Variant GeneID:100125876|C3H1orf85:NM_001105476:8_cdna 116^373 1 EMBV3_00118 GeneID:100125876 3 GENE C3H1orf85 C1orf85 MGC139483 lysosomal protein NCU-G1 EMBV3_21046 TGAACCTTTTTTCCAACACACGGTTTAAGCAGCATAGGTCACGTGGGACAGGGCATGTGG Gene BVV0102_282999 + 0 NULL GK000022.2:56989015-56989566 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129255 TCONS_00129257 TCONS_00129260 TCONS_00129258 TCONS_00129259 TCONS_00129261 TCONS_00129256 1 XLOC_078077 Coding TCONS_00129259 XLOC_078077 Coding Coding CAND2 22:56987729-57011937 j TSS96200 6105 1 TCONS_00129259_2 1145 0.0117936117936118 14 0.748378568182757 5.65630041824884e-36 7.24742920028206e-57 0.000116412593442411 8.19708407607984e-11 1.70077546806219e-05 5.80877552162702e-09 0.000138637292002489 0.000342332450331155 0.000227165126933156 0.000102433175513586 1.00071585932865e-53 5.58788971698146e-11 1.75673455900058e-05 8.17305693934679e-51 0.000111019353650004 0.000964765865176267 0.000231158515843653 0.000443931790404714 0.000174679278370901 7.92022748170761e-19 3.35551361635929e-05 0.000410852388081746 0.000190854088100625 0.000488823365675639 0.000176414863864229 3.29952836353719e-22 2.52955490669353e-14 5.03000355561952e-05 0.000211516443136574 0.000242260740834501 NM_001206543.1 CAND2 Bos taurus cullin-associated and neddylation-dissociated 2 (putative) (CAND2), mRNA. 0.0 7690 99.98 0.698935298935299 NM_001162499.1 CAND2 Homo sapiens cullin-associated and neddylation-dissociated 2 (putative) (CAND2), transcript variant 1, mRNA. 0.0 4329 85.61 0.608845208845209 TCONS_00129259_2 sp|O75155|CAND2_HUMAN CAND2_HUMAN Cullin-associated NEDD8-dissociated protein 2; 0.0 1975 91.35 0.999126637554585 6 coding 1 0 1 1 -2.1895277355586 0.00345760433505842 0.00432206730279815 0.952136376842548 AAGTCCTGGGTCCTCTGGTGGGCAAAGTGAAGGAGTACCAGGTGGAGACCATCGTGGATGTCCTCTGTGCCAACATGCGGTCAGACAAGGAGCAGCTCCGAGACATCGCTGGCATCGGCCTGAAGACCGTCCTGTCGGAGCTCCCCACTGCGGCCACAGGCTCCAGCCTGGCCTCCAACGTGTGCCGGAAGATCACCGGCCAGCTCACCAGTGCGATCGCCCAGCAGGAGGACGTGGCCGTGCAGCTGGAAGCCCTGGACATCCTTTCTGACATGTTGAGCAGGCTGGGCGCTCCGCTGGGCGCCTTCCACGCCAGCCTCCTGCACTGTCTGCTGCCGCAGCTGAGCAGTCCGCGCCTGGCCGTGCGCAAGCGGGCCGTTGGGGCGCTCGGCCACCTGGCGGCCGCCTGCAGCACCGACCTCTTCGTGGAGCTCGCCGACCACCTGCTGGACCAGCTGCCCGGCCCACGCGCGCCAGCCAGCCCCACGGCGATCCGCACCCTCATCCAGTGTCTGGGCAGCATTGGCCGCCAGGCAGGCCACCGCCTGGGGGCCCATCTGGACCGCCTGGTGCCCCTGGTGGAGGAGTTCTGCAACCTGGACGATGACGAACTTCGGGAGTCCTGCCTCCAGGCCTTTGAGGCCTTCCTGAGGAAGTGCCCCAAGGAAATGGGCCCTCACGTGCCCAACGTGACCAGCCTCTGCCTCCAGTATGTGAAGCACGACCCCAACTATAACTACGACAGTGACGAGGACGAGGAGCAGATGGAGACCGAGGACAGCGAGTTCAGTGAGCAAGAGAGCGAGGAGGAGTACAGTGATGATGACGACATGAGCTGGAAGGTGCGCCGGGCAGCGGCCAAGTGCTTGGCAGCCCTGATCGACTCTCGGCCCGACCTGCTGCCTGACTTCCACTGCGCCCTGGCGCCCGCGCTCATCCAACGCTTCAAGGAGCGCGAGGAGAACGTCAAGGCCGACGTGTTCGGGGCTTACATTGTGCTGCTGCGGCAGACGCGGCCCCCGAAGGGGTGGCTGGAGGTCATGGAGGAGCCCACCCAGACCAGCAGCAACCTCCAGATGCTGCGAGGACAGGTGCCTCTTGTGATGAAGGCCCTGCAGCGGCAGCTGAAAGACCGGAGTGCCAGGGCCCGCCAGGGCTGCTTCAGCCTCCTCACCGAGCTGGCGGGCGTCCTCCCGGGCAGCCTGGCAGAGCACATGCCCGTGCTGGTAGCAGGCATCGTCTTCTCGCTGGCGGACCGCTCCAGCTCCTCCACCATCCGGATGGACGCCCTGGCCTTCCTGCAGGGGCTGCTGGGCACAGAGCCGGCCGAGGCCTTCCAGCCTCACCTGCCCACTCTCCTGCCACCGGTGATGGCCTGTGTGGCTGACCCTTTCTACAAGATAGCAGCCGAGGCCCTGCTGGTGCTCCAGGAGCTGGTGAGGGCGCTATGGCCACTGGACGGGCCTCGGAAGCTGGACCCCGAGCCCTACGTTGGAGAGATGTCCGCGGCCACCCTGGCCCGGCTTCGGGCCACCGACCTGGACCAGGAGGTGAAGGAGCGGGCCATCTCCTGCATGGGCCATCTTGTGGGCCACCTGGGCGACCGGCTCGGGGGCGACCTGGAGCCGTCGCTCTCGCTCCTCCTGGACCGCCTGCGGAACGAGATCACGCGGCTCTCGGCTGTCAAAGCACTGACGCTGGTGGCCATGTCCCCGCTGAAGATCAGCCTGCAGCCCATCCTGGCCGAGGCGCTGCCCATCCTGGCCTCCTTCCTGCGCAAGAACCAGCGGGCGCTGCGGCTGACCACGCTGGCGGCCCTGGCTGCCCTGGCCCAGAGCCAGGGCCCTGGTCTCCCGCCGTCCGCCGTGAGGGCTGTGCTGGCCGAGCTACCCGCCCTGGTCAGCGAGAGCGACATGCATGTGGCCCAGCTGGCCGTGGACTTCCTCGCTACCGTGACCCGCGCCCAGCCGGCCTCCATGGCCGAGGTCAGCGGCCCCGTGCTGGCCGAGCTGCTGCGGTTGCTGCGCTCGCCCCTGCTGCCGGCCGGGGTGCTGGCAGCCACTGAAGGCTTCCTGCAGGCCCTGGTGGGGACCCGGCCGCCGTGCGTGGACTACGCCAAGCTCATCGGCCTGCTCACGGCGCCTGTGTACGAGCAGGCAGCGGAAGGCGGGCCCGGCCTGCATAAGCAAGTGTTCCACTCGCTGGCCCGCTGCGTGGCGGCCCTCGCCGCAGCCTGTCCCCAGGAGGCGGCAGGCACGGCCAACCGCCTGGTCGGCGAGGCCAGGTCGCCCAGCTCGAGCCCTGGGGTAAAGGTCCTGGCGTTCCTGTCACTGGCCGAGGTGGGCCAGGTGGCCGGGCCAGGCCCACAGCGGGAGCTGAAGGCGGTGCTCCTGGAAGCCCTGGGCTCACCCAGTGAGGACGTGAGGGCGGCCGCCTCCTACGCGCTGGGCCGCGTGGGCGCGGGGAACCTGCCCGACTTCCTGCCCTTCCTGCTGGGGCAGATGGAGGCCGAGCCCCGGAGGCAGTACCTGCTGCTGCACTCGCTGCGGGAGGCCCTGGGGGCCGCCCAGCCCGACAGCCTGAAGCCCTACGCCGAGGACATCTGGGCCCTGCTGTTCCAGCGCTGCGAGGGCGCCGAGGAGGGCACCCGGGGGGTGGTGGCCGAGTGCATCGGGAAGCTCGTCCTCGTAAACCCTCCCTTCCTCCTGCCCCGGTTCCGGAAGCAGCTCGCTGCAGGTAGGGCCCGGGGATGGGCAAAGGCAGCCCAGATTGAAACAATATTGTATTTGTCCTTATCTGACTTACGTCACTCAGTATCCCCGCTTCTGGTCTCGCTGCCAGGAGAGTTCATGGAGAGCCTGCAGGACCCGGACTTGAACGTGCGCCGGGCCACCCTGGCTTTCTTCAACTCCGCCGTGCACAACAAGCCCTCGCTGGTCCGCGACCTGCTGGACGACATCCTGCCCTTCCTCTACCAGGAGACAAAGATCCGCCGTGACCTCATCCGAGAGGTGGAGATGGGGCCCTTTAAGCACACGGTGGACGATGGGCTAGATGTGCGGAAGGCAGCCTTCGAGTGCATGTACTCACTGCTGGAGAGCTGCTTGGGCCAGCTGGACGTCTGCGAGTTCCTGAACCACGTGGAGGACGGCTTGAAGGACCACTACGACATCCGGATGCTGACCTTCATCATGCTCGCCCGACTGGCTACCCTGTGTCCTGTGCCCGTCCTGCAGAGGGTGGACCGGCTCATCGAGCCCCTCAGGGCCACCTGCACTGCCAAGGTCAAAGCTGGTTCCGTGAAACAGGAGTTTGAGAAGCAAGATGAACTGAAGCGCTCGGCCATGAGGGCAGTGGCCGCCCTGCTGACCATCCCGGAAGTGGGCAAGAGCCCCATCATGGCTGACTTCTCGTCCCAAATTCGATCCAACCCCGAGCTGGCTGCCCTCTTTGAAAGCATCCAGAAGGATTCCGTTTCGGCTCCCAGCACAGACTCCATGGAACTCAGCTAGCACCCACCCCCTGGGGACCCCGACACGCAAGGAGGCCCACCAGAGTCAAAGCCAGAGCCTCACCCTCCTACCACGCAGGCCTCTACTCCTGCCCTTTCTCCATCTCCTGCTCGGGGCTTCCGGCACCTTCTCCAGGGACCCCAACTCACAGGCTCTGTCAGAGCTGCCAACAGTTGGGCCCTTTAACTCAGGACAGTCATTCAGAGGGGGCGTGGTAGTCCTTCCAGGCCTCCCACGAAGATGGATGTGACTTCACACAGGTTAGCCTGGCTCCCTCCAGCCGGGGGTCCCTGCTCAGTGTTCAGTCTTTAGAAATACCCTCGTGCTCACAGGAGGCAGGGGGCCGGCCTTCCTCCCCGCCGCTGTCCCAGACGTCGTCACTCCCCCGCTCCCCTTTCTCTATTTCACCTGTTCTGATCTGCCAAAAGTAGTGCTTTGGCTGGGCATCTGAAAAACTCGAGATACCTCTATGAGCTCTTCACACTTTAGCATCCAAAATGCTTTACAGTTTTGCAAGGCCAGGTGGGTTGGGTAGGAAATAAGATGTAATTTTTTTTCTAACCCCCAGACTCTTATGTAGCAAATCAGCAAACGTGTCACTGGGTGGTTTGTGAACCGTCCTCTTTACTTTTTAGTATCAAGGACACAGAAACAGTAAACGTCAGGCCAAAGAATTTTCTGCCATCCCAGGTCAATAAAGGACAGATCCTGAATCACCGTTATTTTCTCTGCACAATTCCTCTCCTCAGTAGTTAAGACTGTCAGAATGCTTCCCAAGTCTTTCAGAGAAATGAAATGACCAATAATTTACTCAACAAATGTTTTGTCAGATTAGGTTTTGAACAGGACCCATCAATCTGAGACATCTATCTACTACTACTATGGGGTTTAAACCCAGTCCTGTGCCAGAGTGCCACATGCCCTGTCCCACGTGACCTATGCTGCTTAAACCGTGTGTTGGAAAAAAGGTTCATAAAAATTCATGAAACAGCTGAACCCTAGCTATTGTTACCTGAGATCTACGGCTGCAGTTGAAAGGGAAACCTGATTGTCCTCAGTCTTCCTAAGAACCACACAGGGTAACTTCTGTTCTAACTTTACAAAGTGAGGCTGAAAATGACTGCCTGCTCCAAGTGCAAGGTCCTTCCATCTGGGTCTCAGAACCGACCCTGCTCTGAGCAGATCACAGGTCCTTTACAAACACCCCTTCCTAACAGAAGGTTCCAGAGAGCATGAACAGGCACAAGACCAATCTGTGGCAAGCTGTCATACTGAAGACTTAAGAACCAAGGGGGAGATGCCAGATGGTTGGGTTTTATGCTTTTATTACCACAAACAAAATGTGCACACGAGCTGTCTATTCATTTTCCTCGCTGCGCAGTCTGGCATTGGGATTGGTGATTCTGATGGCCAGCTGGGCTGCTCTTTCCACAATGGCCTTGCGGTTCTTGGAGGAGACGTTGTGAGCAATCTCAGCACAGTAAGATCTGGGAGAGACAATCAGTACACGGTAAGGAGGCCTGCCTGGAAGGCACACAGTGTTCCAGTGGGAGGGCGAGAGCTTTGGCTCCTTTGCTTTTAGAGCCACAGCACTAAAGGCAGGGGCTGCAGACTCACCTAATGCCATGGTAGTAGCAGCAAGCTCCTAAGTGTTCCCTGGTAGTGACTCCCCTCACTGAATCCTGCCAGCAGCCTTGCAACCCAGGCATCACCTCCATTTTACAGACAGGGAAACCAAGGCCCACCCAGGCCAGGATGGCTCAGCCCTCTGGGCCAACCTGCACAGCTCAAGGCAGTTTCAGGGAGCTTGGCCTTGCCAGTGAAAAGTTCAGGTAAACCTTCTGCAAAGCAACTAACAACCAAAATGCAACAGTCTGATTAAGCCAAGGGCTGCCCACCCAGACCATAAGCATCATTTACTACAGACAAAATTCAAGCTGAAAAGTAACAATGTCTAGACTCACTCAGTGAATGACAACACTGAACAATTCCTGAGCACTTGGCAGGTACTGGTCTATTCATTCCTTTGCAGCCACATCCCACCCCAGGTTGGCAACAAATTGGTCTCATGAGCACATTTCATCATGAGCACATTTCAGCAAGGAAATGCCATTAACAGTGGATTAAGACAAGACACTCTACACCCCTGGAGGAATTTCAGCAGACTCTAAAGGCAGCAGGCAGAGTTAAGAACTCTGCAGGAAAATAGCTTCACAGTAAGAGACAAACCAATCCAGAGACAGAACTGCTTTGTTTTAAAGTCTACTCATGCAATTATCTTAAAGGAGACTTAAGTTGTATCACACTTTCCATCTTTAAAAAAAAAAAACAAAACACTCAGGTCCTCATCCATGTGTATTTAATAAGCACGATCACAGTGATGTGTTCAGTTACTGCAATGATCAACTTAAGTTTCAGTTATTTAAAGATAAATGCCCAGAAATGGAATTTGTGAATTAGATGCAGAGTATTTCTGTGGCTATTGATAACAGACTGCCAAGGTACTATTTAAAACACACCTATCTTTATGGCAACTGGCAACATATGCACCACAATCTTTGCTACACAAAAGGGATTAAACCGAACCTTTCTG EMBV3_01985 CCATCAGCGGACCGCTCACGATGAGACCACATCCCCTTCACCCTCCCCACAGTTATTTTT Gene GeneID:768226|ZYX:NM_001078101:742_cdna Constitutive 0 NULL GeneID:768226 4 GENE ZYX MGC142604 zyxin EMBV3_07181 CACAGTCTGGAATTAGTGGAACTTATTCTCGTTATAGGTTGAGTCCTCAAACAGTAACTA Variant GeneID:507139|GCA:XM_002685376:298_cdna 770^892 3 EMBV3_12437 GeneID:507139 2 GENE GCA NULL grancalcin, EF-hand calcium binding protein EMBV3_18071 TGAGTTGCTAAAGTGAGCCTGGCTTTAGAGCTGCCTTGGGGTGTGGCGTGGGGGGCACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43371 TCTCTCTCATACCAGCCACGTTTGTAGTTCTCTTTTCTGTAATGTTTAAGCACAATGGTG Gene GeneID:540918|LOC540918:NM_001078029:13_cdna UTR3_Alt 3 NULL GeneID:540918 28 GENE LOC540918 MGC152125 hypothetical protein LOC540918 EMBV3_25538 GCTGCCTTTGCATCCCTATAACAGTGCCTAAAAGGCATAAAAAAGCAATTTCTGAGCTGG Gene GeneID:532890|SLC10A1:NM_001046339:151_cdna Constitutive 2 NULL GeneID:532890 10 GENE SLC10A1 MGC128766 solute carrier family 10 (sodium/bile acid cotransporter family), member 1 EMBV3_22175 GCCTCAGTAATATTATTGAGCAATGAATTTTTTATTTCCGCATGGAAAGTTATTGATCTC Gene GeneID:538782|LOC538782:NM_001076128:8_cdna Constitutive 1 NULL GeneID:538782 7 GENE LOC538782 NULL hypothetical LOC538782 EMBV3_36715 AAGCAGCAGCCTTACCACACCATGGAGAGCATCCTACAGCACCTTGAGTTCTGCATCACA Gene GeneID:520544|VANGL2:XM_002685865:3_cdna Constitutive 0 NULL GeneID:520544 3 GENE VANGL2 NULL vang-like 2 (van gogh, Drosophila) EMBV3_27158 TCACATAGGCATTTGTTAAAACATAGCTCAATAGGCTTGATTCAACCTATACCATCTTAC Gene GeneID:535424|ATL1:NM_001034631:100_cdna Constitutive 0 NULL GeneID:535424 10 GENE ATL1 MGC128477 SPG3A atlastin atlastin GTPase 1 EMBV3_42444 CCAGACTTCTTTGGACCTTGTAGTTTGGACGAACAAGATGCTTCTAATCTCTGCGGAACC Gene GeneID:534996|LYN:XM_002692652:73_cdna Constitutive 0 NULL GeneID:534996 14 GENE LYN NULL v-yes-1 Yamaguchi sarcoma viral related oncogene homolog EMBV3_26059 TGACTTCCACCACTATCGCACGGGAAGGCACCGTCTCTGCATCTTCAGGATATTCCCTAA Gene GeneID:783399|LOC783399:XM_002689932:79_cdna Constitutive 0 NULL GeneID:783399 8 GENE LOC783399 NULL similar to Equ c1 EMBV3_21409 TACAGCCTGGAGGACACGGACAAGCTGCTCCACCTGACGCAGTACAACATTTGCAACAAC Gene GeneID:505485|JMJD7-PLA2G4B:NM_001114657:118_cdna Constitutive 0 NULL GeneID:505485 10 GENE JMJD7-PLA2G4B PLA2G4B JMJD7-PLA2G4B readthrough EMBV3_41129 TCTGTGAGCTCATTGCGCGGGACCAGGGAGGTGGAAGATGAAACTGTTTTACATAACATT Variant GeneID:509106|EZH2:XM_002687034:117_cdna 358^474 1 EMBV3_04914 GeneID:509106 4 GENE EZH2 NULL enhancer of zeste homolog 2 (Drosophila) EMBV3_00799 ACGTCACATAGCCACTCCTCTGTGTTCCTCCGCCCCGAGATAAAGTAGCCCCTAACCATA Gene BVT0102_165672 + 0 NULL GK000013.2:75435378-75466512 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046272 1 XLOC_026670 Coding TCONS_00046272 XLOC_026670 Coding Coding ZNF335 13:75416912-75436743 j TSS33590 5044 1 TCONS_00046272_9 1346 0.013877874702617 28 0.747049924357035 6.99745806712466e-63 3.58789735610226e-80 1.0713188408336e-55 1.20868594606905e-86 1.80002104806198e-125 7.58198871472775e-19 2.77961103522155e-28 1.38832992504574e-41 2.64770194130725e-05 2.75309517118339e-179 3.18851546646746e-06 3.05742314744328e-67 5.34750155839829e-05 5.06359938313533e-05 2.64419603395134e-05 0.000569124961567822 7.39591484514535e-21 0.000240594525684641 2.11630802474727e-50 5.70511135269837e-15 5.21494838355103e-24 4.11188807173611e-05 0.000454228183840791 8.9599776844871e-117 9.9812211122748e-154 9.46146563868235e-147 8.41140155135894e-05 1.43356653486017e-46 0.000149257852586056 0.000200430307241672 XM_005214794.1 ZNF335 PREDICTED: Bos taurus zinc finger protein 335 (ZNF335), transcript 0.0 8709 100.00 0.957176843774782 NM_022095.3 ZNF335 Homo sapiens zinc finger protein 335 (ZNF335), mRNA. 0.0 5378 86.73 0.884218873909596 TCONS_00046272_9 sp|Q9H4Z2|ZN335_HUMAN ZN335_HUMAN Zinc finger protein 335; 0.0 2192 89.82 0.99925705794948 4 coding 0 0 0 0 -0.0760647147225358 0.624968354294052 -0.0673219473551792 0.182521369236702 AAGTCCCTCTACTTGACATGAGGTTGGACCAGCCACCTCCCATCTCAGGGCCTCAGTTTCCCCATCTGTAAAACAAGGATTATATGCTTCCCTCTTCCCAGGACACGTCAAACCTAATCGGGAAGGATCTGATTAGGTTCGATGAAAAGCGTAAAGTAACCGCTTAAAAGGCAGGCGAAAAGACCGATAACATTTATTTCTTTCTCACCAACCAAACACTCCGTTTCACGTCTTTCTGAGCTGTTCCGGGAAGGGCGTGGCCAGGCCACCGGGAGCCACGCCTCCGGAAGTGGGGCCAGACTCAGCCGCGCCCCGGCCTGCGGCCCAGGGAAGGGTCCAACAGTGACGTCACATAGCCACTCCTCTGTGTTCCTCCGCCCTGAGATAAAGTAGCTCCTAACCATAGAGGATTCTTCCACTCATACTAAGCGACATATAAAATCTCAGATTCTCTTACGACTCTATTATGATTTTCAGGCCTCGGGGCTACCTTCCAGAACATTGGAAGCCTGTCTTTCTCCGGCCCGGCGTAGGAAGTAGTCCCGGCCTCAGGGAGGTCGATGGGTCCCTCCGCCGCGGGGGGGAAGAGGATGGCGACCTCGTCGATGCCGGAGTCGGAGAGGAACACCGCTACGAAAGCGTCAGAGTGAAGGCCCCGGACCTTGGGCCCCCCTGTCAGGCAGCCTTCCGAGCCGATGGAGGAAAACGAGGTGGAGAGCAGTAGCGACGCGGCCCCTAGGCCTGGCCGGCCCGAGGAGCCCACGGAGAGCGGGTTGGGTGTGGGCACCTCGGAAGCCGTGTCGGCTGACAGCAGCGACGCCGCGGCCGCCCCGGGGCCAGCGGAGGCCGACGATTCCGGCGTGGGGCAGAGCTCGGACCGCGGCAGCAGCTCGCTGGAGGAGGTATCTGAGAGCAGCTCCACCACAGACCCCCTGCCCCATGGCTACCTCCCTGACTCATCTTCTGTTTCCCGTGGGCCAGCGGCAGGGGTGATGGGTGGCCCCCCAGCCCTGGTGCACTCCAGTGCACTGCCAGACCCCAACATGCTGGTGTCCGACTGCACGGCTTCTTCCTCGGACCTGGGCTCGGCCATTGACAAGATCATCGAGTCCACCATCGGGACCGACCTCATCCGGAGCTGCATCACCGTGACCAGTGCGGAGGGCAGCGGGGCCGAGGCCACACGGTACCTGATCCTGCAGGGACCAGACGATGGTGCCCCCATGGCGTCACCAATGTCCAGTTCTACCCTGGCCCATAGCCTGGCAGCCATCGAGGCCCTGGCTGATGGCCCCACATCCACGTCCACGTGCCTGGAGCCACCGGAGGAAGCGCAGGGTGGGCCCAGCTCCCCGGCGCAGCCACCCCTGGGTTCTGGCACCGAGGAGCCGGACTTGCAGAGCTTGGAGGCCATGATGGAGGTGGTGGTGGTGCAGCAGTTCAAGTGCAAGATGTGCCAGTACCGGAGCAGCACCAAGGCCACGCTGCTACGCCACATGCGGGAGCGGCACTTCCGCCCAGGTGCGTTGATAGCGGCTGCAGCTGGTAAGAAGGGGCGTCCGCGCAAGTGGGGCAGCTCAGCCCAGCCCCAGGAGGAAGAGGGCCCAGAGGAGGAAGACGACGATGACATCATAGATGCTGGTGCCATCGATGACCTGGAGGAAGACAGCGACTATAACCCTGCAGATGACGAGCCCCGGGGCCGGCAGCTGCGGGCCCAGCGCCCCACCCCCAGTACCCTGAGACCCCGCAGGAGACCTGGCCGGCCCCGGAAGCTGCCTCGCCTGGAGACCTTGGATCTCCCAGATGGTGTGGAAGGAGAGCCTTTAGTGAGTCCACAAAGTGGACAGAGCCCTCTGGAGCCACAAGACCCCGAGGCACCCAGCTCCTCAGGGCGGGGACGCCTGGTGGCCCTGGGCAAGGCCAACCGGGCCCCCGTGGAACCCAGTGTGAGCCAGTCAGATGCGAGGAGCGCGGCGGCATCCTACCAGGATGAGGCTGACGCCCTGCCCCGCCGCCGTGGTCGACCCTCCAGGCGCTTCCTTGGCAAGAAATACCGCAAGTACTATTACAAGTCACCCAAACCGCTCCTGCGGCCTTTCCTGTGCCGCATCTGCGGCTCCCGCTTCCTGTCCCACGAGGATCTGCGCTTCCATGTCAACTCCCACGAGGCCGGCAACCCCCAGCTCTTCAGGTGCCTGCAGTGCAGCTACCGCTCCCGTCGCTGGTCCTCACTCAAGGAGCACATGTTCAACCACGTGGGCAGTAAGCCCTACAAGTGTGACAAATGCAGCTACACTAGCGTCTACCGGAAGGACGTCATTCGGCACGCGGCTGTGCACAGCCGGGATCGGAAAAAGAGGCCAGACCCGACCCCAAAGCTGAGCTCCTTCCCCTGCCCCGTGTGTGGCCGTGTCTACCCCATGCAAAAGAGACTCACTCAGCACATGAAGACACACAGCACCGAGAAGCCCCACATGTGCGACAAGTGTGGAAAGTCCTTTAAGAAGCGCTACACCTTCAAAATGCACCTGCTCACGCACATTCAGGCTGTCGCCAACCGCAGGTTCAAGTGCGAGTTCTGCGAGTTTGTTTGCGAGGACAAGAAGGCGCTGCTCAACCACCAGCTGTCCCACGTCAGCGACAAGCCCTTCAAGTGTAGCTTTTGCCCCTACCGCACCTTCCGAGAGGACTTCCTGCTATCCCACGTGGCCGTCAAGCATACAGGGGCCAAGCCCTTTGCCTGCGAGTACTGCCACTTCAGCACGCGGCACAAGAAGAACCTGCGGCTGCATGTGCGGTGCCGGCACGCCAGCAGCTTCGAGGATTGGGGGCGGCGCCACCCCGAGGAGCCCCCCTCCCGCCGCCGCCCCTTCTTCTCCCTGCAGCAGATCGAGGAGCTGAAGCAGCAGCACAGCACGGCCCCTGGGCCCCCCGCCAGCTCCCCAGGACCTCCTGAGATCCCCTCAGAGGCTGCACCTTCCCAGTCCCCTGAGACCCCCCCACTGCTCTGTTCTGACACCTTGGGTGGCGCCACCATCATTTATCAGCCAGGGACTGCGGAGTCTACAGCCGTGGCCACGCAGACAGCCTTGGACCTGCTGCTGAACATGAGCACTCAGCGGGAGCTGGGTGGCACAGCCCTGCAGGTGGCCGTGGTGAAGTCAGAGGACGTGGAAGCGGGGTTAGTGTCCTCTGGGGGGCAGCCCTCCCCAGCAGGCACCACTCCCCAGGTGGTCACCCTCCACATGGCAGACCCAGGAGGCAGCGTGGCCGCCGAGAGCCAGCTCGCGCCCCCTGACCTGCAGCAGATCACCCTGGCGCCTGGGCCGTTCGGCGGGGCTGGCTATAGCGTCATTACAGCCCCCACCGTGGAGGAGGGCACTTCGACTCCCGGCACGCCTTACAGCGAGGAGCCCCCGGGGGAGGCAGCCCAGACCGTGGTCGTGGGTGACACCCTGAAAGAAGCTGGCACGCACTTCATCATGGCAGCCGACGGGACCCAGCTGCACCACATCCAGCTGACTGCAGACAGCTCCATCTCCTTCCCAAGTACGGAAGCCTTGGCCTCCGGCGCCAAGTGGCCCCTCCTGCAGTATGGGGGGCTGCCCAGAGATGGTCCTGAGCCCCCGGCTCCAGCCAGGACCCACCAGCCAAGGGACCCTCAGGGCTCTGCCTCCCCACCTCCTGCAGCCAGCAAACCCCTGGGCCTGGTAGTGCCCCCCTCGCCGCCATCTGCAGCTACTGCCTCATCAAAGAAGTTTTCCTGCAAGATCTGTGCCGAGGCCTTCACCGGCCGAGCAGAGATGGAGAGTCACAAACGGGCCCACGCCGGGCCGGGAGCCTTCAAGTGCCCTGACTGTCCGTTCAGCGCTCGCCAGTGGCCCGAGGTCCGGGCCCACATGGCACAGCACTCGAGCCTGCGGCCCCACCAGTGCAGCCAGTGCAGCTTCGCCTCCAAGAACAAGAAGGACCTGCGGCGGCACATGCTGACCCACACCAACGAGAAACCCTTCGAGTGCCAGCTCTGCGGGCAGCGCTTCAACCGCAACGGGCACCTCAAGTTCCACATCCAGCGGCTCCACAGCCCTGACGGGAGGAAGACGGCAGCCCCCACTGCACGGGCCCCAGCCCGGCCCCCCACCCAGACCATCATCCTCAACAGTGATGACGAAACGCTGGCCACACTGCACACTGCCTTCCAGTCCAGTCACGGAGTCCTGGGTCCGGAGCGGCTCCAACAGGCACTGGGCCAGGAACACATCTTTGTGGCCCAGGAACAGACAGTGAGCAATCCGGAGGAAGCCGCCTACATCCAAGAGATCACCACGGCAGACGGCCAGATGGTCCAGCACCTGGTGGCATCTGACAGCCAGGTACAGTACATCATTTCCCCAGACGGAGTCCAGCAGCTCCTTCCCCAGGAATATGTGGTGGTGCCCGAGGGCCATCACATCCAGGTACAGGAGGGCCAGATCACGCACATCCAGTATGAGCAAGGGGCCCCCTTCCTTCAGGAGTCCCAGATCCAATACGTGCCTGTGTCCCCGGGCCAGCAGTTGGTCACCCAGGCCCAGCTCGAGGCTGCGGCACACTCAGCTGTCACAGCGGTGGCTGACGCTGCCATGGCCCAAGCCCAGGGCCTCTTTGGCACAGAGGAGGCGGTGCCCGAACACATCCAACAGCTGCAGCACCAGGGCATCGAATACGACGTCATCACCCTGAGCGATGACTGAGCGAGCCCCAGGAGCCCCAGGAGCCCAGCACAGACCGTGAATGTTGATGGGGCCTGCCCTGCTGGGGGTGGAGGCCCATGGGGACTCCCTCCCTGCTCCACCTAGGATCTCCAGATACTGAGCAGCCAGCATCCTGTCACTCCTGGGGAGCCAGACCTGTGCTGCTGGGGTTGCGGACAGCCATGGGCACCAGCCAGGACACGCTGGGGGCCCCAGCCTGCAGGCAGGCTTCGGGAGAGAAATTTATTTTTGTTGGTATGTACCCACTGGTCTCTCAGGCTCAATAAAGGGACCAGAGTCTAGCCGTG EMBV3_22300 TGCTGGTCAATTAGATGTTTTCCTTCTGCAGCAAATGCCCCTTTATGATAGAGAGATTCC Gene GeneID:509291|LOC509291:XM_002698480:536_cdna Constitutive 0 NULL GeneID:509291 26 GENE LOC509291 NULL similar to chromosome 10 open reading frame 130 EMBV3_20926 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29537 GCAAACCCCCTTCAGTTAACACCCATGAACAGTCTCGCCACCTCTGTATTCAGCATAGCT Gene GeneID:541277|TSC22D2:NM_001144101:56_cdna UTR3_Alt 2 NULL GeneID:541277 1 GENE TSC22D2 NULL TSC22 domain family, member 2 EMBV3_26173 TGTGCTCCATGTCTGAGTGACGATCTTTGGCGTATCTGTGAGACGACGGGGAGCCTTTTA Gene BVV0102_405318 - 1 EMBV3_21657 GK000023.2:49303205-49386707 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29849 GGTGACCTCAGTGGTGTTGTTGCAGAGCGCAGACATAGAAAAATGTAAGGGAGGCCATTC Gene GeneID:617261|ZNF280D:XM_002690858:232_cdna Constitutive 4 NULL GeneID:617261 10 GENE ZNF280D NULL zinc finger protein 280D EMBV3_39904 AAGAGGCCACTGGCTGGACAAATTACGGAGGCCTGGGCGGACGATGTGGGGCGCTTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42172 TGTACAAAGTAAGGGTCACAGAAACAACCCGAGGGAACTTTTTTTGATGACTATTCATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37527 TGAGGAGTCTGTGTGTCCTTGTGCAGTAGTCTGAAGAATTGTTTTTCCCTCAGCAAGCCC Gene GeneID:539594|BUB3:NM_001076177:51_cdna Constitutive 1 NULL GeneID:539594 26 GENE BUB3 MGC139040 budding uninhibited by benzimidazoles 3 homolog (yeast) EMBV3_00895 ACACACAATGGCGGCTGACACCTAGTCCCATCATCCTGTCCTAGATCCATATTCTACACG Gene GeneID:100140210|USP30:XM_002694539:489_cdna UTR3_Alt 3 NULL GeneID:100140210 17 GENE USP30 NULL ubiquitin specific peptidase 30 EMBV3_25673 GCCCTCACCCTGCTACCAGCTTGCCCAGCGGACCTTCCACACTTTTGATTTCTACAAGAA Gene GeneID:617005|MRPL38:NM_001035489:38_cdna Constitutive 1 NULL GeneID:617005 19 GENE MRPL38 MGC127321 mitochondrial ribosomal protein L38 EMBV3_19926 CCACCAACCCTCTCCATGTCCAATTTACACGAGGCTACCATGCCTGTACTTCTTGACCAT Gene GeneID:540918|LOC540918:NM_001078029:13_cdna UTR3_Alt 3 NULL GeneID:540918 28 GENE LOC540918 MGC152125 hypothetical protein LOC540918 EMBV3_04817 CATTGGGTGTCCTGCAATTGATCTGGCAAGCCCACCTCCACAGCCACTTTGTTATAGTAC Gene BVV0102_251805 + 0 NULL GK000007.2:96805608-97076525 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00223268 1 XLOC_136570 NonCoding TCONS_00223268 XLOC_136570 NonCoding NonCoding - 7:96998538-96999304 - TSS167266 766 2 TCONS_00223268_3 68 0.31331592689295 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.19765716016354e-05 0.000262631233222946 0 0 0 0 0 0 XM_005194557.1 LOC101909126 PREDICTED: Bos taurus glutamate receptor 4-like (LOC101909126), 7e-08 62.6 79.17 0.0926892950391645 XM_005271518.1 GRIA4 PREDICTED: Homo sapiens glutamate receptor, ionotropic, AMPA 4 (GRIA4), transcript variant X1, mRNA. 2e-09 68.0 80.56 0.0926892950391645 0 noncoding 0 0 0 0 -0.160148541823575 0.34264159555286 -0.00882236552500473 0.858405650334868 CGCTGCGCGCCCTGGGTCCAGGACCAGAGTTTGATTTCTTCTGCCTTGACTTCATCCCCATCCTCCCCTCCCCGCTCTTTGCTTGTGCCCTTAGTTTCTCCTGCAATCAGGGTCTAGAGGTTTCCGGGAGTCTGACAATAAAGCAAGTCCTGAAGTTGCAGGGAGTTTACCCGTGTCCCAAGACGTGGAGGATGCGCACTGCTTCTCATCCCATTCCAAACGCAGAGTATCTTCTTTTCACCCAAGTGCGTTTTCCTTTCGTTACTTACAAAGCAAATGAGAAAGGCTCCTGCAGCCTTGGTTTCTCCCCAAATCTACTGCTCCAAGGGTCTTCTGAATCTCCTGAGAGAGTAGTAGGATCCCTTCCGCACGGCAAAATGTAGGAAACTCACAAGAGCCCTGGCACCATAATGCCTAATTCCAATCTCCGCTAGCTAGCAGTATGCCCTGGATGTATCACTCAATGCTTTAAGGTTTTTCTTTTTCTATTTGCTTACCTTTGTAACAAATATTTATTGAGCACCTACTATATGTCAAGCAATATGACAGGCTCTGAGGATGCAGCTGTGAACAAGGCCAACAGGGCTCCACCCTCATGCAGCCTATCTTCCAGTGGGAGAATCAAACAATTTCTAATAGTGAAAAGTCCCATGGAGAAAATAAAACAGGGTACTATAACAAAGTGGCTGTGGAGGTGGGCTTGCCAGATCAATTGCAGGACACCCAATGAAATTTGAATTTCAAATAAATGATGTACAAATAATGT TCONS_00218087 . 5' 26545 TCONS_00218087 . 5' 26545 EMBV3_43325 TGTCTGCGCTGTGCTCAGTCTCTTCAGTCGTGTCCGACTCCTTGCAACCCCATGGACTGT Gene BVV0102_371864 + 1 EMBV3_19625 GK000019.2:48867610-48871226 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12666 GGTTGCCAAGCGCTCAGACTTTGCCTCCAAGTGTTGTTCTGTAAACTCACCTCCTCTCTA Gene GeneID:530076|GC:NM_001035380:77_cdna Constitutive 0 NULL GeneID:530076 6 GENE GC MGC127742 group-specific component (vitamin D binding protein) EMBV3_40020 GCAGCTGCGCTACCAGGAGATCTCCAAACGCTCAGCTGTAGCAGCCTCTGAGAAGAAGGC Variant GeneID:338063|NDUFA7:NM_176658:15_cdna 113^262 1 EMBV3_25772 GeneID:338063 7 GENE NDUFA7 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa EMBV3_21750 CACTGGCTGAGAATTTGGGAAGTGAGGAGGACAAGAAAGGGAGAAGGGGGTTCCCTTGTA Gene GeneID:534092|DDR1:NM_001076012:162_cdna Constitutive 1 NULL GeneID:534092 23 GENE DDR1 NULL discoidin domain receptor tyrosine kinase 1 EMBV3_29258 AGAACATTTTGACTTTGGCTGGGGAATACTTCTTGCAGGCGGAGCTGACGAGTAACGTGC Gene GeneID:534383|FBXO18:NM_001099063:16_cdna UTR3_Alt 2 NULL GeneID:534383 13 GENE FBXO18 MGC157095 F-box protein, helicase, 18 EMBV3_07362 AGGAGGCCTTGGCCACACGTTGACCTCTGGTTACAACTCAAGGATCCAGATCTCAGCTAA Gene GeneID:510689|NAIF1:NM_001101074:58_cdna Constitutive 0 NULL GeneID:510689 11 GENE NAIF1 H11C9ORF90 nuclear apoptosis inducing factor 1 EMBV3_33962 ACTTTGGATACTGTCCCCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATCGGCCTTT Gene GeneID:539235|CSNK2B:NM_001046454:174_cdna Constitutive 1 NULL GeneID:539235 23 GENE CSNK2B CSKN2B MGC134413 casein kinase 2, beta polypeptide EMBV3_08909 GCCAAATCTCAGGTTATTTCAAACTAGACGTCAGGGTTTATCAAAGAAGCGAGGAGGGCC Gene GeneID:513572|ERAP2:NM_001075628:17_cdna Constitutive 0 NULL GeneID:513572 7 GENE ERAP2 NULL endoplasmic reticulum aminopeptidase 2 EMBV3_38831 TGCTTCAATCATAAGTCCCCAGATGTGTGTTGCCCTTGTGGTGGTTTCCTGGGTTGTAGG Gene GeneID:784745|LOC784745:XM_002707709:284_cdna Constitutive 0 NULL GeneID:784745 10 GENE LOC784745 NULL similar to Olfactory receptor 4K2 (Olfactory receptor OR14-15) EMBV3_30138 CGTATCTTAGATAACAATTCTTTATCAGATGTGTCTAGCAATCTGTAGTTTGTCCTCGGG Gene BVV0102_360950 + 1 EMBV3_22826 GK000008.2:48782110-48892496 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00231363 1 XLOC_140852 NonCoding TCONS_00231363 XLOC_140852 NonCoding NonCoding - 8:48888885-48890348 - TSS172867 1463 3 TCONS_00231363_2 49 0.226930963773069 1 0 0 0 1.89760831798324e-05 0 0 0 0 0 1.07862465972865e-05 9.84327443127988e-05 1.25177658276804e-05 6.84340554851653e-05 0 0 0 0.000758228859031355 0.00114616056893775 0.000137202477845777 4.90152533975869e-06 0 0 0.000197816943438541 5.64365006697431e-05 4.5836173271059e-05 0 1.92630644190682e-05 0 0.000420185210240476 0 0.000127395724288858 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 2e-62 244 86.05 0.145591250854409 XM_005252191.1 ZFAND5 PREDICTED: Homo sapiens zinc finger, AN1-type domain 5 (ZFAND5), 7e-43 179 68.91 0.280246069719754 0 noncoding 0 0 0 0 -0.0669639086783979 0.735385858644619 0.0362669928715327 0.53595399153193 GACTCATTGGAAAAGACCCTGATGTTGGGAAAGTTTGAAGGCAGAAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGCATCACCCACTCAATGGAGATAAGAATTTGAGTAATCTCCGGGAGTTGGGATGGACAGGGAGGCCTGGTGTGCTGTGGTCTACAGTGTTGCGAAGAGTTGGACATGACTGAGCGACTCAACTGAATTCCTGAACAGCCTTGGTGTGTTATTGATGGTTTCAGATGTATATAATTTGAGGGTATGTGGTGACTGTTTCAATCAAAACTGTCAGCAAAAAATATACTCACAACAGACTATTAACCAACTAGAAAGTAACATATACCTTCTGTCATCTTGCTGTTTACTTAAGTATCACGTGTGAGGTACAATCACAAGTCAGTACTTATCCCAGAAAGGAGAGAGTACTTAATTGTAAACAAAATGGAGTCTTACATTTATGTAAACCATTTTGTGGTTTAACTTTTACTTCTAGAACAGAAATGCACCCTAGGGAAAAACACAAAATAATGCTCTTTGCTTTTATATGAATTAAAATCCAGAGTTTGTGTTTGAAAACAGTAATAAGCATTAAACAGCACTTCTGTGTTGTTGTATATGCACATTTGCTTTAAAGCAGACTGTACAAACATAAGAAACTGTTTTATCAAATTTAAAATTACTTTTTGTTAACAACACGCTGCTTTGCCCATGGAAACCTTTCTACGTAGTTTAAGGCTATATAATCTTACTGCTAATCAATCATAAACCACACCCATCATTCCCTCCAAAATTATAAGCTAAATTTATAAACAAAATTCACTGTAACTTTGCATTCAAATATTTAAGCAAATGAGTCAAATTAAGTCTCTGTACACAAAAATTTACATGACACAGAGGAGATAAACTTTCTAAGTTATGACAGTTACCTAAAACTTATCTTTGGAATGGGTCATATGCAACAAAATGAAAGATGCTTTGTTTCTCAATGTGTATCAATGAATTCATTTTCAAACCCTGAGAATATATTACCAATTCAAAAAATACGATCATAACTAATATGCTTAATATGCAGTTATATTACTTAGAGTTTTGCCCACTCTTAGCAAAGAACTTGATTTAATGCAACTGAAAAGAATGATTCTAATCACTTAAAACTGAAAGTTACAGATCTTTACCTTTTCATTATACAACTTAATGTAACCAATCCTATTATCAAAAAATTTTCTTTCCAAGTTCTAGAAGTCATTACTCTAGGATATTAAAATTAGTAATAACCCGAGGACAAACTACAGATTGCTAGACACATCTGATAAAGAATTGTTATCTAAGATACGAAAAGAACTCTTAAAATAGGAAAACAAACTACTGGGCCAAAGAGCTTATTAGACACCATGTTAAAGATAAACAGATTGCAAATTAATACTAAAGATTCAAGTTACCATAATGAGATTTAACTGCAC TCONS_00227580 TCONS_00227581 TCONS_00227582 TCONS_00227583 . 3' 1534 TCONS_00227580 TCONS_00227581 TCONS_00227582 TCONS_00227583 . 3' 2996 EMBV3_16487 GAGGTTTGCTGAGGACCTTATTGTCAAACATCTCTAGCCCTTGTTGAATCTTTCCTTGCC Gene GeneID:534061|TRDN:NM_001103280:4_cdna UTR3_Alt 2 NULL GeneID:534061 9 GENE TRDN MGC140240 triadin EMBV3_08564 ACAGACCCTGAAGAAGGCAAGAAGAAAGCAATGGATTGAACCCCGGAATTGTGCCAGACG Gene GeneID:539527|BMP3:XM_002688382:24_cdna Constitutive 0 NULL GeneID:539527 6 GENE BMP3 NULL bone morphogenetic protein 3 EMBV3_30666 ATCCTCACTTGGGCAGTCTCAGAAGACAAGAGTCCAGTGACCGCTCTGGGGCAAAACTCA Gene GeneID:614940|PRSS35:NM_001035457:65_cdna UTR3_Alt 1 NULL GeneID:614940 9 GENE PRSS35 MGC129068 protease, serine, 35 EMBV3_42001 TCACAAAGAGTGTGCAAACATGAATGCTATGACTTAATTACAGCAGTTACTTTCTAATAC Gene BVV0101_079712 + 0 NULL GK000004.2:97612112-97776963 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32732 GTCCCTGAGTCCCTGAGAATCGTCTACTATCTTTGTGTGGTTTGGGTCTGGGGAGGCTCT Gene BVV0102_149357 + 0 NULL GK000005.2:107215356-107264074 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196282 1 XLOC_118298 NonCoding TCONS_00196282 XLOC_118298 NonCoding NonCoding - 5:107259265-107263688 - TSS146105 4353 4 TCONS_00196282_11 136 0.120606478290834 2 0.0160560832202623 0 4.95046560806211e-12 0 3.0191233829525e-12 0 0 0 0 0 0.000240094654164693 0.000219462846492377 5.20906932105796e-05 8.89181943991433e-13 0 0 0.00342865359119493 0.00197284978499975 0.000216561645916777 0 1.02585833400083e-12 0 0.00162562740032839 0.0023177270905828 0.0016570845696179 0 1.24078714462827e-12 0 0.000286102249685856 0.000811902447625091 0.00159286310958495 XM_005225041.1 GPR146 PREDICTED: Bos taurus G protein-coupled receptor 146 (GPR146), 4e-07 62.6 86.54 0.0117160578911096 NM_014191.3 SCN8A Homo sapiens sodium channel, voltage gated, type VIII, alpha subunit (SCN8A), transcript variant 1, mRNA. 7e-17 95.1 85.71 0.0188375832759017 0 noncoding 0 0 0 0 -0.0316414247356216 0.787768146028359 0.0339067548065547 0.594709684952201 GGGGACGTGAAGTCTCTGGCCACACCAGCTGCCCGGGGGGTGGGTTCCAGGTCGGGGTAGCCCAAGACAGAGAGGGTAGGAGTGCTGGGGCCAGCTTCTGAGAGTGGGGGGGGGGCCCTGGGGTCCCTCGGGGTCCTCTTCGGTGGTGAAGGCCAAGACGTTGGTCCGAGGTCTGCACTGTTCTGGTGGTCTCTGAGACCATGCGCTTGGTATGCCTTGCCATCTCACAGCAAACGCCTCCCAGTCAAGAAGCCTGCTGGGTGGTGACCACCTTGGAGCAGCCGGGCCGACCACCCCCTCCCTGGACGGAAGGTTCTGTGCCCCCTGGGGATGGAGGAGTGGGGGAGTGGAGCCCACCCTGGGCCTGGAGGGGACCCCTCAGCTGAGGGAACTTCCCTGGTCTGTTCCTCCTGGCAACTAGCCTCAGTCCTAGGGCTTCCCACTGCCCGCCCTGTCTCAGCGTGTGTGTCCTTTCCTCCCTGTAGAGGAGGACGGCCTTAGTGAGGAGGACGGGTCTGTATAGAGCCTGATGCAAGGTTCACTAAAGAGTTGCTACCATTCTCCTCCTGGCCCTTGGGATGTGGGGAACCGGCTCTTTGCTGCCATCTAGTGGCTATTTGCTGTCATCTTCCCTAATAGGGAACCACACTTCAGGAGCCTGGAGCCCAAGGGGAGCAAGAGTCACCTGCAGGAGTTTTGTATGCTGATCTCTCAGGGACATGTGTGGGGATATGAAGTGAATAAGATGGTGCTGAGGAGGTGTTGTGTGGTTAGGAGCCAGGGCTCTGGAGTCAGCGGCTAGGATTGGAATCCTGGTGCTCAGCTTTGGACTAGTGTGGCCTTGGGGAGGTTACCTAATTTCACTGTGCCTCAGTTTCCCCATCTGTACAATGGGTATAACAATAGTACCTACCTCGTATATGTAGAGTGCCTAGCATGGTGCCAATCACACGAGTGTGTGCCGTGAGTATGCATTATTATTAATAGCACTGACTCTTTGCAGTCTGAGGAGTCAGCTTGGGAAACTCTTAATTGGGGGTGGGCTGGTCCTCAGAGCAACTGGAATTCAGAGGTGGGAGGGGGTGGGGCGTGGAAGGTTCAGAGAAGAGGCGGAAATTGAGAGGGGCTGCTTCTTGAAAGAGAGGCATTGCCTAGATAAGCAGCCTGAAGAGGCAGTCTGCTGGCAGCTCTGGACAGGGCAGGCGGACCAGCCCTCCAGGTTCCTTCTGGACAGCTGCTAGACCCTGGGCTAAGTCGTGTCTCCCTCCTGGGTTCCGGGGCCCGCCTCTCATCTATAGACAATGTGATGTGGAGGGAGGCGAGGGGTCCCTGAGTCCCTGAGAATCGTCTACTATCTTTGTGTGGTTTGGGTCTGGGGAGGCTCTCCTGCCCACCCCTGGTCACTGTCACGGCCTCTGCCCTCCCACCTCCCCACCCTTGTTCCCGGAGCTGTCAGGATAAAGGGAGCCCGTGACCTCTGCGTCCCCACAGGACTGAAGCTTCGGACAAAACACTTGCGTGTGAGCAGCCTTGGGCCCTGGGACGGATGCGCAAGCTGCGCCCATCGTTTTGTGTCCTGGGTCTAGGGAGTCCATGTAGATGTTGGGGCCAGGGGCTGGCTGCGAGTGTTCCCTTCTCTTTAGGACCTGGTCTCAGCAGCCTAATGGACAGTCACCTACTTAGAGCTGGAAAGTCCAGACCATTCCACCACCGAGAACATAGATCTAGGCACCTCTCCCTGAGGCACAGTGCAGACCATGACCCATGGGGCCAATAAATGGGAGATCCCACCCGGCCTGCTTCTCCTGCGCCGCCATCTCACACACATCCCCTCCTAGCCACTCTCTGCCTTTAGTCTTGGCCCCTCATGTCCCCTGGCCAGCAGGCCCCCAGAGAACTGTCACTCATTCTTGCATGGAGTGACACTCCCAGCATGGAGCCACTTCTCCTGCAGAAGGGATGCTGGCTCCTGCCTGGCGGGGCAAAAGCATTCCACTCACAACCCATCAGGGCACCTGTCACCCATCCCTGGGCATCGGGGCTGAGACATCTCTTCCATTCTCACCCGGGGGTGCTGTGCTCTCCCCATTTTAAAGATGAGGGAAGGGCGTCCAGAGAGGCCAGCTAACTTGCTTGGAGTGTTCTGGAATCTGAATGCATGTATTCACCAGCCTAACATGTGTTTATTTAACTTCCGGTTCATGCCAGGCACAGGGATGTACCGATGGCTGAGACAGATGGGGTCTCTGGGAAGCTTATGTCCTACTGAGGAGGGAAGACAACCCGAGTGGGTAAAGGATGGGCAGACTGATGGGGGACCACCAGGAGATGAGAGAGGACCTGGGGCCTGGGGAGGGTGGTGTGTGCCTGGGGACAGCAGGGAGGCCATGTCAGGAACCGAGAGAGGGAGCTGCAGGTCCAGATGTGGCCCAGCTCCTGGCCCCCAAGGTCAGGAAGGGCTTGGATTTTCCTCTGTATGATGGGAGGTCCTGGAAGGATCTTAAGAGAGGGAGTAATACCGTCGAGTCTGGTTTCTGGGAAACGACACCAGGCGGCTGTGGCCCGCAGAGCAGTGTCATTGTTTCCGAGTCTGTCTTATCCTTGGACTCAGCATCAGGGGCAAGGGAGCCACTGCAGGACAGAGGTGTCCTGCTCTGTCACCTTCTACAATCCAAACCCCACGTCTGGGGCACGGCAGGCGCCTGGTGAACATTCCCAGGTGTGTGATCCCTGCCTTTGGGGCTGTGAGTGAGGGTCCTGGAGTCTGTGCGACCCTTAGCGATAGGACCCTCCTGATGGCACTAGGAGCCAAGAGGTGGGGACGTGGAAACCGGACGGTGCCTGACCCGTGGTGTCTGGTGACTAAGCAGGGCCCCGACAGTCATCAGGGACTTTCCATTGAGTGGGGGTGCTCTTCCTAACGGGGGGAGCCCCATGCAGCAGGAGTTGAGGGGCATGTAGACTGGATCCAACAGGTGAGGAGCGTGGGGCCGGGGCACCTGCTCCCCTCCCACCCAGCCAGGGGCGGTGCAGCCCTTACTGGCAGGGATGGTGACCACAGGGAGCCCCAAACCCTGCAGGGACAGGGCCACCTGTGCACATGTGGGCCACATCTGCCCGGAGGAGGGGCAGAGCTGGAGCTGGGCTGTGGCCCATTTTACCTGGTTATCCCGGGGGTCACTGCGTTTGACCCCTTCTGACATTACTGTTGTGTCAGCCAAGAAAGGAAGCAAGAAGGTGAATCTGGAGCAGTTGTTCTGAGGATGGAAACCCGGAGCCAGGTTGCTGGGGGCTGAGTCGGTTTCTTACCAGTCGTGTGGCCTGGGGCAAGTGACTTAGCTCCGGGAACCTTTGTGACCTCGTCCGTGAAACGGGAATGGAGTGGGCTGGTTGTGGGCTGCTGTGGGGAGGAGGGTGAGCACACGTGTGAGGGGGCAGCCCCACACCCAGCTCAAGGGGCACACGGCGGGGTGCGACGCATGAAGAGGTTGGTCCTGACTCTGCCCCTGCCACCTCGGCCACACACACTTACACGTTCACACTCACAGCACACACACGGGCACACACATTGCATACACACCATGCACACAATGCAGCACACACAACTACACACACACTCACACTGTAACACACTCATACACACACATGCAGTACACATTATACGCACACACTCACACATAGACATACGCACTATCACAAACATACTGCATGTACCACACACCTACACACACACACTCAACATCCATCATATAGACATACTTGCACTACACACACACACGTATGGACACGTAGGTGCCAGCACACGCACACACATTCTTAGAGAAACAAAAGCTCTGCTCTGACGTCCTTGCAAAGGCAGAGAGAAGGGACTTCCTGGTGGTCCAGTGGTTCCGACTCTGGGTTAACAATATAGGGGGCATGGATTCGAATGCTGGTTGATCCCACATGCTGCGGTATGGCCAAAAAAAAGGCAGAGAGGAGGCCTCGGGGCGCCTGGTTCAGCAAGGAGGCCACCGTTTTAGACTCTCCTCCTCACTCCATGGGCAGGTGGTGCGGTGGTGAGGTGGGGGGGGTGTTGGAAACAGGGAGCAGGTGTTCTTCATTGGGAAAATAACTCTGGAAAGGGAGCGCCGAGCCGCTCCGATTGAGAAGCTGTCCGGAAGTGGGTTTTGTTTCACTTCCCGTGACAGGATGGGTGAGTGGGCCTGTGCCTCTGAGGAGGGCGGGAGGCCGGTGGGAGGAAACGGTGTCCGGATTCATGGGTGTCTGATATTCAACCTCAAGTGTTTGTATTTTGCTCTGTGAACCCCCTTTGTCTCCAAACCTCAGTAAAGTCTGCTCCACACACAAAGG TCONS_00196283 TCONS_00196284 TCONS_00196285 TCONS_00196286 TCONS_00196287 TCONS_00196288 s 3' 3994 TCONS_00196283 TCONS_00196284 TCONS_00196285 TCONS_00196286 TCONS_00196287 TCONS_00196288 s 3' 311 EMBV3_13815 CCTAGAAGCAACAGATGGGGAGGATACAGCAGAGATCAGGGAGTTCTGGAGAAACTACAG Gene GeneID:526543|CENPBD1:XM_002694866:833_cdna Constitutive 0 NULL GeneID:526543 18 GENE CENPBD1 NULL CENPB DNA-binding domains containing 1 EMBV3_32651 TCTTGCCTGAGGACAGTGTTATCTTAAAATGTAAATTATGGGAGTAGGTCGGAGGAGGTC Gene BVT0102_368781 + 1 EMBV3_01163 GK000026.2:50701240-50787411 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199364 TCONS_00174805 TCONS_00100195 TCONS_00174808 TCONS_00209974 TCONS_00204211 TCONS_00171428 TCONS_00174809 TCONS_00000529 TCONS_00204210 TCONS_00174806 TCONS_00206552 TCONS_00174807 8 XLOC_121017 XLOC_104695 XLOC_060438 XLOC_128485 XLOC_124371 XLOC_103815 XLOC_000141 XLOC_125074 Coding TCONS_00000529 XLOC_000141 Coding Coding - 1:45088092-45096984 - TSS270 8451 4 TCONS_00000529_10 143 0.745473908413206 2 0.0497131931166348 2.01012307707297e-05 1.49871009079085e-05 1.36625311347943e-05 4.53987540290904e-06 1.24531364209072e-05 5.00814608360259e-06 8.46442312822931e-06 1.24185267133133e-05 4.13121620626016e-05 0.001823279532659 0.000814409045036406 0.000443886703423644 0.000426802436486759 0.000631969837416122 0.000420788496196143 0.0164351832051245 0.0118459757916584 0.0133511864103435 1.34853947675417e-05 9.74488686084332e-06 4.71379726774531e-06 0.0113995265993752 0.0116294525732748 0.0115848317310599 2.19528616543606e-05 1.81962347473363e-05 1.11450810621553e-05 0.00508280936174051 0.0025318551055437 0.00742716955264329 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1225 90.86 0.102828067684298 TCONS_00000529_10 sp|Q08DI6|RNF11_BOVIN RNF11_BOVIN RING finger protein 11; 6e-28 104 42.47 0.895104895104895 0 noncoding 1 1 1 1 0.0450297516627036 0.769473730118356 0.00899590186576138 0.845664037517258 TATTTCGAGAAACTGATCCCAATTCTTTATTTTCCATGGTCTACTTTTATACACTGAGATGTTATGCAAAAGTCACATGGGGTCAGCAGTCCTGACTTTTATCAAAGTCAGGTGCTTCATACAAATGTATACAGAGGTCTTAGGGGTATTACATCATCTTCTGGCCAGGGGGCCTGCTGACAATTTATGACCCTCTCCTTATGACAGCGGTCAGTCAACCAGGACACTTATTTCTCCAGGGGTGATTATTCTTAAAAAAGACTCCACCTTCCGAAGGTACCAGATAAAGTTACATTCCTATAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAACCTAAAGTCTAACGTGATGGTCCAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTGGCTCAACAAATGAAAAACCCTTCACCAATACAATTTCTAATCAGCCCACTACTTATACTAATGGTTTTCTAACTTTTCTAAGGAATCTGTTTTTAGAAGGTTTAAAGCATCTCGTGCCTCTCACGGTTGGGAGGCTGTGAGCAATCACTTGTGGCCGGACAAGCCTGTCAGGCAGGCTAGAGAACCTTCAAAGGAGTTTGTAGGTTAAAACACTCTTGTCATGCCCAGGAGTTTTTATTAACTGGAGCTGTAAGTTAATTCCTTCTCCGAAAGAGGTGGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAGAGCACAAAGTAGTAAAGTAGGCAGGCTCTGGTTATGGGGGTAGATGCTCGAGGATTTCCAGGGGGACTCCTGAGACTTGATCCCGCCTTTGCGTATGTCGAGCCTCCTTCCTCATGACCTTTGCCATGGGTGGAGGTCCTCACACCGGCTCCCAACAAGAGTGAAATAGTTGGCTTAAAGCTCAACATTCAGAAAATGAAGATCATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAACTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCTGTCTAGTTAAGGCTATGGTTTTTCCAATGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCATTTGACTGATGCTTTTGAACTATGGTATTGGAGAAGACTCTTGAGAGTCCCTTGGACTGTGAGGAGATCCAATTGGAAGGATCTATGTTGGAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGCGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGAAGGGGACAACAGAGGATGAGATGATTGGATGGCATCACTGACTCAGTGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATAGACAGGGAAATCTGGCATGCTGGAGTGAGGTTGGACACGACTGAGCAACTGAACTGAACTGAAAATGAAAAGATCTAGCTTGATTTTTCTTCAAAGGTAATTTATGATTTATTATTTAACCTGTGTCCTATGATTGCCAAATTTTTTAATATTATTGGAAAATAAATGAGTTGAAAAATGACATTACAGGAAGATCAATTATACAACTAGATAATTTATTTCAGGATTCTGCAGTATTTTGAAGCTTGGAGAATATTCTGGTCCTTAGGTACAGCAGCTAAGTGTGATCTGAAGAGACCCACGCCGGATGGTTTTCTCAGACTTAGAGTACGACATGGGGTGCTCCAGAGCCCTGAAAACTGTATCTTTTTACAGCGCCAGCATTTCTCCTTTTGCCATCCTGGCTTGAGAGGATGCTGGTAGCTTAGGTGTTGTCTTGGGAATGAGGAGTAGGATGGTTCTGCTGCTAAGAACTAGTAACAGTCTCTAGCTGCATCAGGACAACACAACCTCACAAAGCAGTGAGGCCACTGGCCACTCACAAAACAGAGATGGCCACTCTGTCTGGCAGACTGAAGGAGCAGAATTCCAGGAAATGCCAGTTTTCCATAATTGTATCATTGCCATGTTCTGTGCCTGGGGGACATACTTTATTAAAGAGGTTGGGTCGATTAGATTTGTTCTGACTGGTATCCAGGTGGGTTACTCAGGTGGCTGCCCTGGATTACCTGCATGATGAGATTATGTGACCCAAGGGGTTCCATACCTGATGAGGTTATATCAATGATGGGGTTAAGCTGCATATAAGAGCTCACCATCTGAAAGGGGCTTAGTTTCTAGAGAGACACTCCGTGGTGACAGTGACCCCAGCAGAGAACTGGCTTTGTCATCTTCTCTATAGATTTGGATCCTGACCTGGGAACCAGGAGGTGTCCTGCAGAGCCGGCTGTCAGCAGCGGACAGGGACCTCACCCCCAGGCCTGAAAGATGGGGAACTGCATCGGCTCCAGCACCGGGGACGACCGGCCGGTCGCTCGGTTTCCGGCCCCCCTCCGAGAGCGCAGAGGCGGAGACGGCCCGGGGGCGGGGGGACCGCGGGGTCCGGAGCGGCGCGGGGCGGGGGCAGCCCCGCCGGGAGCGCCGCTGACCTTCCGTCGAAGGATCCGCCTCATTCAGAGCCCACCTCGAGACGTGTACGGAAGGGATGGATGCGAGACGAAGACCACCGAGTGCGCGGTCTGTCTGATGGACTTGGTGCCCGGGGACCTCATCCGGCCTCTGCCCTGCAAGCATGTGTATCACCTGGACTGCATCAACCAGTGGCTGACCCGGTCCTTCACCTGCCCGCTCTGCCGGGGGCCCGCGGACGCCGCGCAGCCTTTGTTTGAGGACGCTCTTGAGCCCAGACCCCTGGTGTGATTGCAAGGGACCCATCATTTTTACTGATTTCCATGTTCCGTACTGTGCCCAGATAGCCAGGGGTTAGGAATTTAAATCGTGCACAAAGGTTTATTAAAAGTTCCTGGAATGTGGCAGATGTCCGGGAACCGTTTCTAATGTTTTAGAAAGATAGGGAGAAATAGCGGGTGAACCTTGACCAAGTGCTGAGAGGTATAATGACGTCTTAGCATTGTCCTCTTGCTAGAACTGTGCACCCTGTTTCAGCAGCTCTACGTGTTGCATTGCATCTGTTGAACGTCAGGGAAAGATAGTGGTTACTCTTCCTAAATGAAATCAGATTCTTCTCCCCCATCCAACTTAAAAGTTGCTGGCATTTAGGCCACAGTTTTATGAAAAGTTACAATTTATACAACTGAACTAAAATAAAATCAAAGTATGTATGAGTGAATACCTGAAGAATGTTATTCTCAATTGAGCCTTCTAAATGGTCTTATCCGTTTGTTCTCCATCATTTTGAGACCCTTAACCCTTTCCTCTTATAAATCCAAACCAGGTGAACAAAGTGTTCCAGGGAAGAACAGTCCTGAGCAGGTTTATTATCTGTGTAATCAGGGCGTGTCCAGGCACTTTAGCTGTGTTTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTATCAGGTTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTGCATTGCCGGTTCCTTCTCCGGGGGATCTTCCTGACCCAGAAATCAAACCCGGGTCTCTCACATTGCAGGCAGACGCTTTACCATCTGAGCCACCAGGGAAGCCCAAGGGAAGATAGTTCTCCATTAAACTGGAAGTCAGCCAGCTTCACTCCAGTTCCACTTTACAAGCCTTATCAATTTACATTTTCCTACCAAAGCAAATACTTAAAGTTTGAACTTTCAAAATTTTCTACTTTTTATTTGTCTTTATCTCTTATGGTTGTGAAGAGCTAATTCATTGGAGAAGACCCTGATGCTGGGAAAGATTGAGAGCAAGAGGAGAAGGGGGTGACAGAGGATGAGATGGTTGTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTATACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGATAAGGGGCGCTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAATCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACGGGAAGCCTTCCACTGACGAAGAGGGGAGCGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCCAATGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCACTGCCCTGTGCTTAACTCTAGAGCTCGGGTCAGGGCCACCAGCTCCGCTAACTGAGCACTAGTTTCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGATAGTGGCAGGATTTAAATTTCCACAAACTTTAAGTTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAATGCCGTTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGACCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCGATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATACGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAATTTTGTAGATCCCGTGACAAACTTTGTTCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAATCCTTTCTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGTTCCACATTCATGAAAACAGATGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTCTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCTGGGGGCGGCTTAGATCCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGATTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCTTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTGCCTAAGTCCCTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGTGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATCTCTTACCCCTTGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCAGGTACGGGGGCAAAGTAAGAGGATAGGAGGGAGCTGAAGAT TCONS_00000526 s 3' 6565 TCONS_00000526 s 3' 6565 EMBV3_06908 ACAGGAGTGAAAGCATATGAATGCAACCGCTGTGGAAAAGCATACAGGCATGATTCATCC Gene GeneID:521549|ZNF642:NM_001102063:185_cdna Constitutive 0 NULL GeneID:521549 3 GENE ZNF642 MGC179608 zinc finger protein 642 EMBV3_07667 TGGCTTGGATTTGATGCCTTGGGAGACAGGCATTTGGGACGTCAACAACCAATTCTGTAC Gene BVV0102_287944 + 0 NULL GK000003.2:7705631-7848906 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171829 TCONS_00171834 TCONS_00171836 TCONS_00171840 TCONS_00171830 TCONS_00171832 TCONS_00171831 TCONS_00171838 TCONS_00171835 TCONS_00171839 1 XLOC_103925 Coding TCONS_00171839 XLOC_103925 Coding Coding ATF6 3:7669048-7843427 j TSS128094 2087 1 TCONS_00171839_3 695 0.0560613320555822 17 0.988129236486254 0.00235149355843029 0.00131589790891074 0.00206994292426849 0.000509255289459167 0.00287557267745361 0.000450631625211594 0.00103771956503189 0.001387825038104 0.00196881645795451 1.45342148436808e-60 0.000943737457899782 0.000247802139615784 2.37250862496508e-142 0.00191879479028248 4.89682360697226e-05 0.0110290685989929 0.00455515454409869 0.0240247695773746 0.000516418341009312 0.00383031942076865 0.000623752149205842 0.00532553710987938 0.002187663184736 0.00500306237681711 0.000768774329910111 0.00347474727042982 0.00172898891256492 0.00124254850228099 0.00032699305777925 0.00219463981771372 XM_003581916.2 ATF6 PREDICTED: Bos taurus activating transcription factor 6 (ATF6), 0.0 3308 99.78 0.883085769046478 NM_007348.3 ATF6 Homo sapiens activating transcription factor 6 (ATF6), mRNA. 0.0 2468 89.78 0.876377575467178 TCONS_00171839_3 sp|P18850|ATF6A_HUMAN ATF6A_HUMAN Cyclic AMP-dependent transcription factor ATF-6 alpha; 0.0 1088 90.55 0.873381294964029 2 coding 0 0 1 1 -0.0362487241302086 0.800943436536779 0.0117454403077321 0.800051529668917 ATGTCGAAAACTCCAAAAGGGAAAAATACTAGCTCAGCGATTTGTTTAAAACTAGCTCAGGCTCTGGCGGCCCTCGTGCGGCGGAAGCAGTTTGTCTCCATTCGGCCACCGTCGCGACTAGTCACCGAGTTACTGGGCAGGGGAACGTGTGTTTCGGGGGAACCGGCTGGCGTTGCCGGCACCATGGAGTCACCTTTTAGTCCGGGACTCCCTCACCGGCCGGATGAAGACTGGGATTCTGCCCTGTTTGCTGAACTTGGCTATTTCACAGACACTGATGACCTGCAATTGGATGCAGCAAATGAGACTTATGAAAGTAATTTTGATAATCTTGATTTTGACTTGGATTTGATGCCTTGGGAGACAGGCATTTGGGACGTCAACAACCAATTCTGTACAGATATTAAGACAGAACCTCAGCCACTTTCGCCAGCCTCCTCAAGTTGTTCAATCTCATCTCCTCAATCAGTGGACTCTTACTCATCAACTCAGCATGTTCCTGAGGAGTTGGATTTGTCTTCTACTTCTCAGATGTCTCCTCTTTCCTTATATGGTGAAAGCTCCAACAACCCCTCCTCAGCAGAGCCACTGAAGGAAGACAAGCCCATCATTGGTCCTAAGAGCAAAACTGAAAATGGACTGACTCCAAAGAAAAAAATTCAGATAAATTCGAAACCTTCAATTCAGCCCAAGCCTTTATTACTTCCAGCAGCACCCAAGACTCAAACAAACCCCAGCGTTCCAGCAAAAACAATCATTATTCAGACACTACCAACACTTATGCCATTGGCAAAGCAGCAGCCAATTATCAGTATACATCCTGCACCTACTAAAGGTCAGACCGTGGTGCTCTCCCAGCCTACCGTGGTTCAGCTCCAGGCCCCTGGAGTTCTGCCCTCTCCTCAACCAGTCCTTGCTGTTGCTGGGGCAACCACGCAGCTACCTAATCATGTGGTGAATGTGGTACCAGCCCCTGTGGCAAACAGCCCAGCAAACGGGAAACTTTCTGTGACCAAACCTGTCCTACAAAGTACGATGAAAAATGTGGGTTCTGATATTGCTGTGTTAAGGAGACAGCAACGTATGATTAAAAATCGAGAGTCAGCTTGTCAGTCCCGCAAGAAGAAGAAAGAATACATGCTAGGCTTAGAGGCAAGGTTAAAGGCAGCCCTTTTGGAGAATGAGAAGCTGAAGAAAGAGAATGGTTCCCTGAAGCGGCAACTGGATGAAGTTGTATCAGAGAACCAGAGGCTTAAAGTTCCTAGTCCGAAGCGAAGAGCTATCTGTGTGATGATAGTTTTGGCATTTGTAATATTGAACTATGGACCCATGAGCATGTTGGAACAAGATTCCAAGAGAATGAATCCTAGTGTGAACCCTACAAATCAAAGGAGGCATCTTCTAGGATTTTCTGCTAAAGAGGAGCAAGACACATCGGATGACATCATCCAGAAAAACAGCTACAGATATGACCATTCTGTTTCAAATGACAAAGCCCTGATGGTGCTAACTGAAGAACCATTACTCTATATTCCTCCGCCTCCCTGTCAGCCCCTGATAAACACAACAGAATCTCTCAGGTTAAATCATGAACTTCGAGGATGGGTTCATAGGCACGAAGTGGAAAGGACCAAGTCAAGAAGAATGACGAATAATCAACAGAAAACTCGTATTCTTCAGGGTGCTCTGGAACAGGGCTCAAATTCTCAGCTCATGGCCGTCCAATACACAGAAACCACTAGTATCAGCAGGAACTCAGGGAGTGAGCTACAGGTGTATTATGCTTCACCCAGAAGTTACCAAGACTTCTTTGAAGCTATCCGCAGAAGGGGAGACACGTTTTATGTTGTGTCGTTTCGAAGGGATCACCTGCTGTTACCAGCTACCACCCATAACAAGACCTCAAGACCAAAGATGTCAATTGTATTACCAGCAATAAACATAAATGGTAACTTTTGCCCTGCTGAAGTATTCTTGCAAAAGGGTCATGACCAATACCTTGCCAAAGCCAAGAGTCATGTCTTCATTCTCATCTTACCTGACCTCACAATGTTATTTGACATGGTTGACTATTCCCGTTTTTTCAG EMBV3_27172 TGATAAGACACATAATACTGGTGCTGGAGTCTGCGCAAAGGCTGGGCTCCTGGGCATCTT Gene GeneID:512001|GKN2:XM_002691439:125_cdna Constitutive 0 NULL GeneID:512001 11 GENE GKN2 NULL gastrokine 2 EMBV3_11103 GATAGTGGTGAGCTGGCAAAGCCCAAGATCAATTTTCCAGAGACAGCGGAAGAGGAGCTA Gene GeneID:510201|STRAP:NM_001015567:32_cdna UTR3_Alt 3 NULL GeneID:510201 5 GENE STRAP NULL serine/threonine kinase receptor associated protein EMBV3_28284 AACACAGACTTCCATCAGCCGACAAACTAGAGGAAAAGCAGCAGAGAGGGTCAGTTCTGC Gene GeneID:790225|MLKL:XM_002694707:145_cdna Constitutive 0 NULL GeneID:790225 18 GENE MLKL NULL mixed lineage kinase domain-like EMBV3_17519 CAGGTCCAAAGCCTTCAGCACTTGCAGTTCCCACATCTTGGCCGTTGCTGTTTTCTATGG Gene GeneID:518885|LOC518885:XM_002707899:3_cdna Constitutive 0 NULL GeneID:518885 9 GENE LOC518885 NULL similar to Olfactory receptor 8G2 (Olfactory receptor OR11-297) (Olfactory receptor TPCR120) EMBV3_03985 ATCAGATGCCGACGTGAGAGTGCTCTATGTGGACTATGGAAACATCGAAACCCTGCCTCT Gene GeneID:536516|TDRD1:XM_002698529:184_cdna Constitutive 0 NULL GeneID:536516 26 GENE TDRD1 NULL tudor domain containing 1 EMBV3_41269 GAACCATCCCAAGTGAGAGAGCCAGTCTGGAAGGAAGAGCTTCGGAGTGGATAGAAGATT Gene GeneID:506727|NFKBIE:NM_001130746:243_cdna Constitutive 0 NULL GeneID:506727 23 GENE NFKBIE NULL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon EMBV3_25707 TGGTGTGCATTCCCTGCATCGTCATTCCAGTTCTGCTCTGGGTCTACAAAAAGTTCCTGG Gene GeneID:784106|LOC784106:XM_002686133:225_cdna Constitutive 0 NULL GeneID:784106 3 GENE LOC784106 NULL similar to MGC127989 protein EMBV3_16786 TCATGGCATTCTTCCCCAGACGTTTGCCCCACAGGCTTGCTTGTACTCCTGCTATTCTCT Gene BVV0101_057780 + 0 NULL GK000007.2:43862152-43937425 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00158 TGCAAGTAAAATATGAACGCCCAGGTTGTTGGGGAGCAAGAAGGCACTCCGAATACGAGG Gene BVV0102_084805 + 0 NULL GK000018.2:21937956-22021982 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082547 TCONS_00085715 TCONS_00085711 TCONS_00085707 TCONS_00085714 TCONS_00085706 TCONS_00085710 TCONS_00085709 TCONS_00085708 TCONS_00085712 TCONS_00085716 TCONS_00085713 2 XLOC_051040 XLOC_051938 NonCoding TCONS_00085716 XLOC_051938 NonCoding NonCoding - 18:21984917-21987892 - TSS63935 2191 5 TCONS_00085716_8 78 0.287083523505249 3 0.264290517821116 0.00182641488452268 0.000809687584178279 0.00179862434961679 0.00122642845919443 0.00219097246985599 0.000208030018842198 0.000854980757709003 0.000616079421024945 0.00157523872053424 0.000138244150152092 4.48192937775336e-05 8.00484062837288e-52 0.000179199028873188 4.08373024098771e-12 7.49175201115582e-05 0 0 0 0.00130902998101821 0.00221363966828439 0.000468915565164288 0 0 1.09768318493243e-30 0.00113404232167927 0.00099266169571942 0.00161128470264854 4.38392756756947e-06 3.31049224057965e-60 0.000162283167178756 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 5e-97 360 95.54 0.101780009128252 0 noncoding AACATGGAAAACAAGAAAAAAAAAGGAATACGAAATCGAAAGCATTCATCATTCTGTCAGCTGAAGACGACCAGTGTTAACTTTAACGTGGCCCTGCACTGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCTGACTCTGTGCAGCCCCATAGATGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACATTGGAGTGGCTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGGAAGTGAAGTCGCTCAGTCGTGTCCGACCCTCAGCGCCCCCATGGACTGCAGCCCACCAGGCTCCTTGTCCACAGGGGGCCCTGCACTACTTTTGTCTTTATGTAGCTTGTGCTCTGGCTTCACTAACCCAAAGCCCCATGTCCCAGCGTGCTCTTCTGTGTGACACGTATTTATTTTGACTGCCCTGGGTCTTTGTGTGCCTGGGCTTTCCCTAGTCGCTGTGAGTAGGGTCTGCTCTCTAGCTGCGGTGCTTGGGCTTCTCCCTGCAGCGGCTTCAGCTGTTGCAGAGCATGGGTTCGGTACTTGTGGCACACGGGCTTAGTTGCCTGGAGCATGTGGGATCTTCCCAGACCAGGGATCGAACCCCTGTCCCGTGCATTGGCAGGCGGATCCTTAACCACTGGACGAACGGGGAAGTCCTCTTCTACATGATTTTGAATGGCTTCAGGGTATTCTTTCATAGGAATGAGCCACAAAAATTCACTCGGTACAAGATTCCTAGGTTTTCAGAACCGTAAGCTTTATACACATATTCCTTATGATGAACCCATAGCTGTAGAACTTCTGGATCAAAGAGGGCCTATGAGACCCATCCAGCATCCATCTCCCAGAATTTCACATCACGTCTGAACCAAAATCCTACTTTAGGGGCCCTGAGTGTTCATCATTGCAGAAAGAACTGGCTGCGACGCCGAGTGGTGCTCCTCAGAGTTAAGGGGTGCTTGGCCGAGCATCACAACCAGAGGGAGCAGAGTGGCTCAGGACTGTTTTTGATCAGTTCCTTACCTCCTGAGTGATTTAGACTCGGATGTCTCTGGAAGACATGCCACAGGCCATGTTTCAGGTCTGGTGCATATGTAGTCAATAGAACATCACCACAGGCTCAGATTAGGAAGAAAGAATAATTTACTCATCTTCATTGCCCAAATGCCACCACTTGCCATGATCATTATCATCCCAACTTTGCTTTTCCTTCTTCCATATCCTGTCCTGTTTGTTCCCATGGATGCTTTGCCTTCTCCTGCACATCTCATTCAGTTGAGTTGGGTTCCTCTGGATTCCTCAGAACAGAGTAAGAGGCAACTACATTCATCAGGTCTTTAGAAAAATCCTGGCACCCATCGGGATCACATGAGGTGTAATCTGCAGGAGGCTGCCTAATTGACACTCTCATCAGTCACCAATAAAAGGGAAGGCGTGGCAGAAGACTCGAGGATGTCAGAAAGAAGCACAACCTGAGTAGAGGTGAGGCAGAGACCAGGGTTGCCCAAGGTCATGGCAAGAGACGAGGTGGAGGGAGCCCTCCCTTTCTGACTGCTGGCTCAGTGGTCAGTCCACGCTGACCAAAAGAGGCTGCTTGTACTATGCAAGTAAAATATGAACGCCCAGGTTGTTGGGGAGCAAGAAGACACTCCGAATACGAGGTGGAAAGGGGGAGCCGGGAGCAGGAGAAACCGGACTTCCCTTTTATGTGTTGCTTCATGCCTCTGCTGGTGAACAGCAGGAGGAGAGAGAAATGGCTGACTCCAAACCCACAGTTCCTGCCCTGGAGTGAAATAAAATACTCCGAGGCTGGTGTTTCAATTGGTGCAAGATTCTGAAGAGAGCCGAACACTCCCTCTTCCTTTTTGGGACATGAATTCCCCAGCTGAAAAAATGCATCACTTGGCCTTACCTGCCCTACTCCATCACCACCTCCTTCTCAGGGATGTCGTGACAAAGAGGTATTTGCAGTGTTCTTCCAAACTTGTCTGATGCCAAGAATTACCTGGGAAACTTGTCAAAATACAGACTCCCAGGCCAAACCCTGGACCTAGTGAATCGGCATTGCTAGGACGGCCCTGGGCGACTGTAGTTTTAGAAAACTCCCAGCTGATCCATGTGATTGGGTAATCAGGCAAGTTTGCAAAATATTCAGGGAGTCCCCATGAAAC TCONS_00085717 TCONS_00085718 TCONS_00085719 TCONS_00085720 s 3' 33896 TCONS_00085717 TCONS_00085718 TCONS_00085719 TCONS_00085720 s 3' 31303 EMBV3_28876 TCTCTGTTTACTAGCATTGTGGATGCCCTACTCCACAGTCTGATGCTCTTGCAGCTGTCC Gene GeneID:504337|LOC504337:XM_002688791:182_cdna Constitutive 0 NULL GeneID:504337 7 GENE LOC504337 NULL similar to Olfactory receptor 7G1 (Olfactory receptor 19-15) (OR19-15) EMBV3_16759 GTTTCGGTCTACAGTCCATCTAAAGGACCAACCTGCCTTATACATCTCAAGGAATTCAAC Gene GeneID:615480|SLC35F5:NM_001101242:17_cdna Constitutive 2 NULL GeneID:615480 2 GENE SLC35F5 NULL solute carrier family 35, member F5 EMBV3_08396 TTCGGGGAAACGCTGCACTGGTTAGTTCAGATCCTGGCTCGAGCGTTCAGCCGTGCGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02342 AGAAATGAAGGCTAAATCACGTTCTAGGTCTGCATCTCACACCAAAACTAGAGGCACCTC Gene GeneID:782389|FUSIP1:XM_002695830:212_cdna Constitutive 0 NULL GeneID:782389 19 GENE FUSIP1 NULL FUS interacting protein (serine/arginine-rich) 1 EMBV3_16337 TGACAGAAGGGCTGGTTTCTGTGATGGCCCCATTTGTCTGCATCGTCATCTCTTACCTGA Gene GeneID:505295|LOC505295:XM_002691590:136_cdna Constitutive 0 NULL GeneID:505295 11 GENE LOC505295 NULL similar to Olfactory receptor 1L3 (Olfactory receptor 9-D) (OR9-D) (Olfactory receptor OR9-28) EMBV3_04846 CCCTGTCAGACGACCCCTTGTCACCTGCTGAGGATAAACTGCCCCACATTGTTGAGTATT Gene GeneID:513640|LOC513640:XR_084664:80_cdna Constitutive 0 NULL GeneID:513640 28 PSEUDO LOC513640 NULL similar to CXXC-type zinc finger protein 6 (Leukemia-associated protein with a CXXC domain) EMBV3_22492 CTCTTTTCTTGGGGCCGCGGTTCCCGGCGGAAAAATTGATGTTTTGAAAGCAACTGCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40488 CTCTTGACCTTCAGCGTGGATGACCGGCAGAGCTTTGAGAACCTGGGTAATTGGCAGAAA Gene GeneID:511866|RAB9B:NM_001075541:42_cdna Constitutive 0 NULL GeneID:511866 X GENE RAB9B MGC142439 RAB9B, member RAS oncogene family EMBV3_01051 ACCTGAAAGAGAAGTACCACGCAGCTCTCAAGGTGGACCTGCTGCAGGGTGCAGGCAATA Gene GeneID:538720|WNT8B:XM_002698491:570_cdna Constitutive 0 NULL GeneID:538720 26 GENE WNT8B NULL wingless-type MMTV integration site family, member 8B EMBV3_04539 TTAAGAAAGTACCCGGTTTTCATGATTCCTATTTGGAACTGGGGAAGAGGTCCTTATGGC Gene GeneID:539668|CUL4B:XM_002699510:100_cdna Constitutive 2 NULL GeneID:539668 X GENE CUL4B NULL cullin 4B EMBV3_37162 TACAGCAGCTAAACCATCAAATTAGCCAACAGACCCAGCTACGTGGACTAGAGAGGGAGG Gene GeneID:100336754|LOC100336754:XM_002694096:372_cdna Constitutive 0 NULL GeneID:100336754 16 GENE LOC100336754 NULL hypothetical protein LOC100336754 EMBV3_36652 GAGAGCCTGGCACCAGAACCCACGGCCATGGGCCTGAGAGCTGGCAGCACCGTCCTGCTG Variant GeneID:281871|ISG15:NM_174366:19_cdna 63^248 1 EMBV3_29175 GeneID:281871 16 GENE ISG15 NULL ISG15 ubiquitin-like modifier EMBV3_08820 CTGCTAATACAGGGGATCTGGGTTCAGTCATTGTTTGCGGAAGATTCCAGTGACTCCGAG Gene BVT0102_147506 + 0 NULL GK000019.2:26668467-26675244 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092903 TCONS_00092913 TCONS_00092907 TCONS_00092910 TCONS_00092916 TCONS_00092911 TCONS_00092906 TCONS_00092915 TCONS_00092904 TCONS_00092917 TCONS_00092914 TCONS_00092905 TCONS_00092912 TCONS_00092908 TCONS_00092909 1 XLOC_057019 Coding TCONS_00092910 XLOC_057019 Coding Coding NLRP1 19:26655740-26672125 j TSS69817 5075 1 TCONS_00092910_3 296 0.312512315270936 8 0.69073486328125 0.00190596966608566 0.000367546855090502 0.00347902623549021 0.00323150305723637 0.00589899562224598 0.00115530951749747 0.000542384404684146 0.00475034477891821 0.00454796740519582 0.000161287740707296 9.7995445212214e-37 6.14689488058124e-06 0.00114645007334905 0.00187013853148898 0.00397980779285116 2.18185848893822e-12 2.52390687112153e-06 0 0.00339756785252485 0.00512864292210991 0.00422614508105263 1.0724766020834e-13 5.46398533526929e-17 5.36068814178236e-11 0.00488075560695966 0.00279538906157412 0.00384890319989371 1.73098042432669e-11 1.32759574338771e-22 2.26567727878444e-09 XM_003583564.2 NLRP1 PREDICTED: Bos taurus NLR family, pyrin domain containing 1 (NLRP1), mRNA. 0.0 2232 100.00 0.243546798029557 XM_005256530.1 NLRP1 PREDICTED: Homo sapiens NLR family, pyrin domain containing 1 (NLRP1), transcript variant X1, mRNA. 0.0 726 80.43 0.153694581280788 TCONS_00092910_3 sp|Q9C000|NALP1_HUMAN NALP1_HUMAN NACHT, LRR and PYD domains-containing protein 1; 3e-121 382 64.36 0.922297297297297 1 coding 1 0 1 1 -1.26576493077625 0.0259018922934231 -0.0808106615061356 0.21362556167843 GCAGCTGAGCTGAGCTCTGAAGGATGGGAGGGGCATGCTGGGCCCGGAAGGGGTTGATTCCAGGCAGAGGTGGTGTAGCTTGCTGAATAAGAGCCAAATGCCTGAAGTGCATAGAAGCCAAGACTAGGGCACTGGTTTTTGAGAAAAGAAAGAGCTTTATTGCAAGGTCCACTAGCAAGAGCACAGGAGGAAGCCAAGTCTGAGGATCCTTCACGAGGGCCCAGGTGGAGCAGAGATGAGTGATACATCCTCCCTCAAGCGGCAGAGACAAGCATCAGAGGGCAGCTCTCCTCAAGCAGCACAGGTGAGGCTCTTCTGTCCGTCTTCTCCTGCCCCTCCGGAGGACGAGCACATGGAGTCTCTGGGGACCGAGGATGACCTCTGGGGCCCCACAGGGCCTGTGGCTACCGAGGCGGTTGACGAAGAGAGGAGCCTGTACCGCGTTCACTTGCCCATGGCCGGCTTCTACCACTGGCCCAACACAGGTCTCCGCTTTGAGGTGAGAGGGCCAGTGACCGTTGAAATTGAATTCTGTGCCTGGGACCAGTTCCTGAACAGGAATTTCCCACAGCGCAGCTGGCTGGCTGCAGGGCCTCTGTTTGACATCAAGGCTGAACCAGGCGCTGTGGCAGCCGTGTTCCTCCCTCACTTTGTGGCCTTCCGAGGGAACGATGTGGACATCTCCCAGTTTCAAGTGGCCCACTTCAAAGAGGAGGGGATGCTCCTGGAGAAGCCAGCCAGGGTGACGCCATGTTACGCCGTCCTGGAAAACCCCAGCTTCTCGCCCATGGGAGTTCTACTGAGGATGGTCCAAACTGCCCTGCGCTTCATTCCCATCACCTCCACTGTGTTGCTCTACCATTACCTCCAGCCTGAAGAAGTTACCTTCCACCTCTACCTGATCCCCAGCGATTGCTCCATTCAGAAGGCCATAGACAATGAAGAAAAGATGTTCCAGTTTGTGCGAATTCACAAGCCACCCCCGCTGACCCCACTCTACATGGGCTCCCGCTACATTGTGTCTGGTTCAGAGAAGCTGGAAATACTGCCCGAGGAGATCTCAGACGGGCAGTTACTCCAGTCTCTCCAGGCCTCAGAGCCTCACCTGACTCCCCAGCTGCCCTGAGATTGAGGCACTTTGTGGACCGACATCGGGAGCAGCTGGTGGCTCGAGTGACATCCGTGGACCCTATCCTGGACAAGTTGCATGGACAGGTGCTGAGCGAAGAACAGTATGAGGGGGTGCGGGCAGAGACCACTGCACCAGGCCAGATGCGGAGGCTGTTTGGTTTCAGCCGATCCTGGGACTGGGCCTGCAAAGATCGCCTCTACCAAGCCCTGAAGGAGACCCATCCTCACCTAATCATGGAACTCTGGGAGAAGTGGGGCAGTGAAGAGACCAGGCCGGGCTCCTGACAAGCTGGGCTGTGAGTCCTGGCTCTGCCTGAGAGCACCTGGGTCTGTTGTTCATCAGGAAACAAGTTACCATCTGAGTTGCCTTCTAGGACTAAAGAAAACTTTGATGATGATGCCTTTGCTGGGCATTACCTTGCCCTGCCCAGGAAAGCCACACAGGAACCCAGATGGCCTCCCTTGGCTTTCATGGACCAGCTGTCCAGGTGAAACGACAGCATCTCAGAGAATGTCCATCTGGAGCTGGCAGGACTTCTGCAGACCTTGTAGAAGCCTAGCCTAAGAGCCTGGTCTGCTGGCCACAGCCGCCAAACCCAGAGTCCTCCCTGTGCTCTCCAGAGGCAGAGAGGAGCAGAGAGAACGTGGGCCTGGGGGCATCTGGCTGGAGACGGACAATGGAAATGGACACCTTAGGGGTTTTGAATGGCTTGTGAACAGGAACAAAAACAGATTGGTTTTTCACTTGTCCATCCAGGGCTGGGGCACCCACGGTCCCCTCAGGGCCCTCCTCGGGTTCATTCCCAGGAGAACTCAAGCCCAACCTGTAGACAGGCCAAGAACAGAAAGGGACACAGAGGCTCCTACATGCAGAAGGCGTGACCAAGGGTGTCTCTACTTTCCAGGCTCCCCCAAACCCACAGCCCCAGGCCCACCCATCAAAGGGGCCATGAAGAGGGAGGTTTACCCCCAAGGCTCCAAGGCAACCCCTCCTCAAAGACAGTGGCTGGAGGGCTGTGGTCCCACTCCCGGGACATCCTGTTCCACACAGACCAGCAAACTTATGGGATAATGCAGAGATGTCTCCCCAAATCACAAAATATTTGAGTGCAGAAAGTGACTTGGCAACAACTCCCAAATAAAGTCAGGGGAAATGTCGCGGTGCAAATCAAAACTTCTGGTTGATGTCAGCTGTCAGTCATGGGTTGTTCGTTTCTACAGGGAGAACAGATAACAAAGGTCAAACAGGCAGGCATGCACACGTATCTACACACACCGTTCCCCCAAACCACGAGATGACAGAGTATCGAACACTCCAAAACACAAACCCTCTATTTTCACTCACACCCACCCGCCCTTTCTTTCCGCTCCCAACTGGCCCCAAGGCCTCAGAGAGCTGAAGTGTGCATGAGTTCCAGAATGAGAGAGAGGAAGTGGAGAACACAGCTGGGAATAGGGTGGCCCCAGGATACGCAAAGGTGCCCAGGCCTCCCGGTATTCCCACAAGCTCTTGGAGAAGCTCAGGCCTCTAACGAGAGGCCTCCTGGGGGCGCATCCAGATGAATGTTCTCCCTAGCTAGGAGGGTGGTGACCCCGAGACCTCTGCAGACTAAGTGTGGGGAAAGCCCAGGTGCGGCGCCACCACGGGGTATGCTCCCGGCCCAATACCTGGGCTCACGGGACCACAGAGAGAGGAGGTGGAGGTCAGGGGTGAGGGTGTGTGAGGAAGGGTCTGCCTGCTCTGCCCTCTCCCGCGGGGCTCCCCTACTCACTTCCCTCCCTTCCAGTCCATTGTGTCTCTTGTTCCTAGAGGCCCAGTAATCTATCCCCAGATCGGGACCCATCTTCATGGCAGCCAACTTAAAAGTGGGGCAGGTCTTGGGGGAGGAGAATGGCCAGAAACAAAGGCAGGTCCGGAACTGGGGGAAAGATGCTTGACTACTTTGGATCCGCATCCTAATCACCAACAATTGGGGTACTGAGGGAAAGCAGTGAGCTGGGAACCAAATCCTGGCTTCACCCACTAGATGTGGCCCTGGAAAAGTCTAAACCACTGTGAACTTCAGTTGTTGGGTCTGTTAAAGGGAGATAATGATACTTACTGAAACGGTTGAGGATGGCAAGGACTGATGCGTAAGATGAGTCCACAGCTACTGATTCAGTGGACAACTGTCAGTCAGTCAACAAACCTTACTTTCATTGTGCCTGAGGATGTTCCAGGTGAGCAGTTTATATTCCAGTGGTAAGGAAATATTAATAGAAATCATAAATCCATTTTGGACTTCCTGGCGATAGAGTGGATAAGAGTCCACCTGCTAATACAGGGGATCTGGGTTCAGTCATTGTTTGCGGAAGATTCCAGTGACTCCGAGCAACTAAGCCTGCAAGCCACAGCTACTGAAGCCCCTATGCTAGGACCTGTGCTCCACAACCAGAGAAGCCACCTCAGTGAGAAGCCAGTGCACTGCAGCTAGAGAGTAGCCCCTGCTTGCTGTAACTAGAGAAAGCCTGAGAATACCAAGGAAGACCCAGCACAGCCAAAAATGAGATAAATTCATTAAGAAGATAATTTCACATACTCTTAGGTACTTTTGAGAAAACAAACATTGGAGAGGGTGATAGTTGGGGGTGAGGGAACAGCATACAACTTTAGAATACTCAGGGAGAAAGGACTTTTCTGAGGAAGCGACGTTCATGAAGGACTTTCCTGAGAAGGTGACATTCGAGTCAGACCTCTGCCCACAGACATCCTTGCTGTTGGGAGTACTGCTACCGCTGTGTGCCCTAGAAATGGAGAATTCTCATAACAGCCTTAGGTATCTCCTTTCGCACCTTTTTTCTATCTCTGCTGTTTGTCGTTTAGTCGAGGAGTTGTGTCCGACCCTTTTGCGACCCCATGGGCTGTAGCCCACCCAGCTCCTCTGTCCACGGGATTTCCCAGGCAAGAATACTGGAGTGGGTTGTCATTTCCTACTCCAGGGAATCTTCCCAACCCAGGGAATGAACCCACACATCCTGCGTCTCCTGCATTGGCAGGCGGGTTCTTTACCCCTGAGCCACCTGGGAAGCCCTATCTCTGTAATCATATATATGTTTATGTACCCACTGACAAAATCTTTCCTGGACCGAACTTTACTTAGGCTCTTCTGAATCCTCTTCCCAACTGGGCCTTGACTCTTGGACTTCTGTGTCGTTTTTTTGCATTGTTCAGTTTTAGTTAGAACCCTACTAATTTAGTTTATCCAGAATCGCCCACCCTTGATACCTGATTAAATTCCTCATCCTCCACATGATATCTGATCACTCTGGCCTGCCTTCAGCAACAATCCTGTTGGCACCAACTCTCCCAGTAGGTTTCCACTGAAAACACACCACCAGCACCACTACCACTGCCCCATCTCTCAGCCAGCCCACTCTGTCCTTGGCTATGAACCCCCAACTTTTCCTTGTATTCAGAGTTGAGCCCAGTCTCTCCCCTCTGCTGCCAAACGCTATCACAGAAGTTCCTATACCTATCACAATGTTGTTGTTTAGTCACTAAGTCGACTTCAACACTTTTGCAACCTCATGGACTATAGCCAGCCAGGCTTCTCTGTCCATGGGATTTTCCAGACAAGAATATTGGAGTGGATTGCCATTTCCTTCTCCAGGGGATCTCCCCGAGCCAGGGATCAAACCCGCATCTCCTGCTTGGCAGGCAGATTCTTTACCACTGAGCCACCTGGGAAGTCCATCTATCACAGTAGTTCTCAGTAAATTCTGCCTTACTATTTGAACAATTGTCATGAATAATCTTTTTCTTTAAGAATGCATGCACACTCACACACACACACACACACAGGGCTTGTGACTGTCTTATGAAACCCCTTATCAAATCCTCCCAGGTTAGGACACATAGTATTTCGAGGCGATGCTGATGTGTCCTCATTTGCCTGGCAAAGCAA EMBV3_13466 AGCCAAGCACCTGCTGCAGGTGAGGGGCGTGGAGGCCTGCCCGCGCCCCCCCAGCGGCAC Variant GeneID:514901|DDX59:XM_002694276:291_cdna 429^924 1 EMBV3_00296 GeneID:514901 16 GENE DDX59 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 EMBV3_18166 CTCTGACTTCCACAGCCCGTGTTCTTATCGCTTCTCTAATGTACCTGGAGTCAAGACAGC Gene BVV0102_185599 + 0 NULL GK000019.2:31333612-31777541 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23732 CGCGCTGGTTTCCGGGCCACATGGCCAAGGGAAAAGCCACCAGGGTGGGCGGCGAGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18241 AGGGGACGGGTCCTTTTTCTCAAAGCTTCAACCACCTGTGTATTAGGGGATCATAGGAGC Gene GeneID:518121|CDC42BPG:NM_001102502:30_cdna UTR3_Alt 2 NULL GeneID:518121 29 GENE CDC42BPG MGC155045 CDC42 binding protein kinase gamma (DMPK-like) EMBV3_17781 ATGGTTTGGGAGAGAACGGGGTGGTCTCAAGAGGCTGGGAAGTTCAAGATCAAGGTGTGA Gene BVV0102_414572 + 0 NULL GK000019.2:11123129-11287809 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092212 TCONS_00092214 TCONS_00092211 TCONS_00092215 TCONS_00092216 TCONS_00092213 1 XLOC_056845 NonCoding TCONS_00092215 XLOC_056845 NonCoding NonCoding - 19:11123406-11168484 - TSS69466 978 1 TCONS_00092215_2 99 0.554192229038855 5 0.978414712602879 0.000375614250242828 6.75552963472792e-05 0.000290161142153703 0.000176302514059712 0.000132179413572125 0.000216467171037215 0.00152449249021327 3.02921248570652e-05 0.000443694705001997 6.45011026797061e-05 8.68127611614319e-29 0 0.000146304775049343 2.40909148506855e-06 4.2859568195511e-05 0 0 0 0.000267769737679253 0.000103590721517668 5.79679629544693e-06 3.4390041167006e-35 0 0 0.000282644176804412 3.51718988532608e-05 7.49397231010239e-05 0 1.24305630118963e-05 0 XR_226270.1 LOC101907104 PREDICTED: Bos taurus uncharacterized LOC101907104 (LOC101907104), 0.0 1764 100.00 0.998977505112474 XM_005260651.1 POLR3F PREDICTED: Homo sapiens polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa (POLR3F), transcript variant X2, mRNA. 1e-24 118 71.89 0.270961145194274 0 noncoding 1 1 1 1 -0.0476305485524263 0.643915249718092 0.065176254469647 0.359677695575517 CGGCTCTCCCTGCCTCTGGAGGCTGCCCTGCCCTTTGGTCGCTTGGCTCGCGTCCGGCGACGCGTGAGGGGGAAGAGCCACTTGCTCTGTGAGAACGAGGCCCTGACGAAACCTGAGGAGATCAGGAGCAGAGAGAAGTAGGGGATGGTTTGGGAGAGAACGGGGTGGTCTCAAGAGGCTGGGAAGTTCAAGATCAAGGTGTGAGCAGATTTGATGTCTGCAGCAGAGCTTCTCAAACTTTCACATTTGTATGAATAACCCCAGTCATCAGGGGATCTTGTTAAAAATGCATCTTCTGATTTGTCTGTGAAGGCCAAGATCAAGATGCTGGCAAATTTGTTATCTGATGGGGACCTGTTTCCTGGTTCACAGACTGCTGTCTCTCACTGTATCCTCAGGTGGCAGAAAGGGCAAGGGAGCTGTCTGGGGTCTCATAAGGGCACTAATCTCATTTATGAGGGCTTCACCTTCATCACCTGGTCACTTCCCAGAGGTTCACTTCTAAATACCACTTTGGATATTGAGATTTGGCATATGAATTTCGAGGGATACAAACATTGTCTATTACAGTTTTCTTTTGTGAATTTTACAGTTTCAACTGTCATGAGTAAATTTTGCACCTAGAAATTTTAATAAATATTGCTGAATAAATAACATTGTTGCATTTAAACTACTCTTTATAGCCACTGTTGGTGAGGATATCTGAGAAATGAAAACTCTAACACAGTATCTTTGAGAATGTAAGTTATGATAACCTTTTTGGAGAACTGTTTGACAGTATGTGTAAGTTTCTAGTGCATATACCCTCTGATCCAGTAATTTCACTTCTAAGAATTTATCTTACAAATATATGGTAGAGGTGCTGTTAATCAGTTCCACTTAACTTTAACAGCTCACCAGAATAATCAACACTGTAGTTCTGTCTTGAAAGTACACACTAACACTAATTAAGTGTACACTAATTCCCATCCTAAAGCC TCONS_00095134 r 5' 218 TCONS_00095134 r 5' 218 EMBV3_17614 GTGTTAATTCCTGTAAAACAGTTTCCTAAGGAAGAAGAGTTGAGGAAAAGTGGAGAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07031 CCCTTGGCCTTAGCTTTGAAATCTGGAGATTATATGCAAACGTGTGTGAAGGCTCGTGAA Gene BVV0102_095853 + 0 NULL GK000003.2:120869392-120904276 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20848 AAAGCACAGCTTCTTCTGGTCATTCTTCCACAGACGGATGTTGAGCCGTGGAGAGGGGGT Gene BVV0102_135137 + 0 NULL GK000018.2:25977512-25984645 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085852 TCONS_00085853 TCONS_00085854 1 XLOC_051976 Coding TCONS_00085853 XLOC_051976 Coding Coding ZNF319 18:25982587-25988991 o TSS64012 4156 1 TCONS_00085853_3 584 0.0459576515880654 3 0.351397782289552 0.000698029213520264 0.000318179375725997 0.000365979330565701 0.000583729398694308 0.000304408032550024 0.000188469333257456 0.000293727262136916 0.00028459658170403 0.000199713514586488 2.45742693788887e-10 0.000731466478904701 6.85950811774205e-06 1.44798296493767e-05 3.36551194112065e-06 3.67330711890645e-05 3.31402235289772e-15 2.32042771113661e-11 0.000281270470475167 0.000201831172530771 7.12803919097073e-09 5.7482055466143e-05 0 9.92764758743497e-05 4.0234552284593e-05 0.00166539005661279 0.000637367657159969 1.18936602657259e-05 0.00013398492997395 4.20495893500897e-05 6.21664615754927e-05 XM_871105.5 ZNF319 PREDICTED: Bos taurus zinc finger protein 319 (ZNF319), transcript 0.0 7124 100.00 0.950192492781521 XM_005256069.1 ZNF319 PREDICTED: Homo sapiens zinc finger protein 319 (ZNF319), 0.0 2805 88.61 0.51660250240616 TCONS_00085853_3 sp|Q9P2F9|ZN319_HUMAN ZN319_HUMAN Zinc finger protein 319; 0.0 1034 96.72 0.991438356164384 6 coding 1 0 1 1 -0.00220186776116027 0.996135614481413 0.0135432549502628 0.806917831631688 CTCGATTCCGGCCGCCGCTAGCCCGTTCCCCGCCCCCGGGCCGGCAGCCGCCGCTACGCGAGGCCGGGGATTGGCAGCGCGCGTAGGCCGCGCTGCCGCGGATGGAGTCGGAATAAAGGGGCGGCTGAGAGAGCAGCCAGTCGCCACTCGCCCCGCGCCTGACCCCGCGGGCGGCCCGGAGCAGAGCCTCCCTGCCACTCCTGGCACCCTGCCCGAAGACCCCAGTCCTGTAGGCACAGCCTTGTAGTCTGTCTTGGTGAATGACTTGGACCGCCTGACCAGTCCCGCTCCGTGCCTTGTCCGAGGTCCTCGTCCATCCCTGATCCTGGGCAGCTTCTCTCTTTGGTGTGGGTCACCTTAAGCAGGGAAACTGAAGCCATTACTCTCCAAACCCTGTTTCATCTTCCCAAGCATGTCGGAGAGCTGGCAGCAGCCGCCGCAGACGCAGCCGCAGCAGCCTCAGCCCCCACAGCCGCAGCACCATGCTGAACCCCCGCCGGCCCTGGCGGAGCACACGCTGCCCCCAGGCACGGCTGAGAACCCCCTGGGCTGCGCGGTCTATGGCATCCTCCTGCAGCCTGAGCCCGGCCTGCAGCCCCCGCAGCACGTGCCCCTGCAGGCCGCGGGGGAGCCGGGCCCCAAGTGTGGCGTGTGTGGTCATGACCTGGCGCACCTGTCCAGCCCACATGAGCACCAGTGCCTGGCGGGCCATGATCGCTCATTCCAGTGCACGCAGTGTCTTAAAATCTTCCACCAGGCTACCGACCTGCTGGAGCACCAGTGCGTGCAGGCCGAGCAGAAACCTTTCGTCTGCGGCGTCTGCAAGATGGGCTTCTCACTGCTCACGTCGCTGGCGCAGCACCACAGCGCCCACAGCGGCACCGGCGGCCTTGTGAAATGTTCCATCTGCGAGAAGACCTACAAGCCCGCCGAGGCGGCCGAGCCCGAGGCCACCGCCGCCCCCTCCCTGCCCCCGGCACCCCCGCCTCCGCCTGCCGTAGCCCCGGCGGAATCGGCCGACAAGCCCTACAGCTGCCCCATCTGCCAGAAGCCCTTCAAGCACCTGTCGGAGCTCTCGCGGCACGAGCGCATCCACACGGGCGAGAAGCCCTACAAGTGCACGCTGTGCGACAAGAGCTTCAGCCAGTCGTCGCACCTGGTGCATCACAAGCGCACGCACAGCTCGGAGCGGCCGTACAAGTGCGCGGTGTGCGAGAAGACCTTCAAGCACCGCTCGCACCTGGTGCGCCACATGTACGCGCATTCAGGCGAGCACCACCTGTTCCGCTGCAACGTGTGTGAGCTGCACTTCAAGGAGTCGTCGGAGCTGCTGCAGCACCCATGCACGCCGAGCGGGGAGCGGCCCTTTCGCTGCGGTGAGTGCCAGAAGGCCTTCAAGCGGCCGTCGGACCTGCGGCAGCACGAGCGCACGCACAGCGCCGAGCGGCCCTTCAAGTGCGACCTGTGCCCGATGGGCTTCAAGCAGCAGTACGCGCTCATGCGGCATCGGCGCACGCACAAGGCCGAGGAGCCCTTCAAGTGCGGCCTGTGTGAGAAGGGCTTCGGGCAGCCCAGCCACCTGCTCTACCACCAGCATGTGCACACCCTCGAGACCCTCTTCAAGTGCCCCGTGTGCCAGAAGGGCTTCGACCAGTCGGCCGAGCTGCTGCGGCATAAGTGCCTGCCGGGTGCGGCCGAGCGGCCTTTCAAGTGCCCAGTGTGCCACAAGGCCTACAAGCGGGCCTCGGCCCTGCAGAAGCACCAGCTGGCCCACTGCTCGGCGGCCGAGAAGCCCCTGCGCTGCACCCTGTGTGAGCGCCGCTTCTTCTCGTCCTCCGAGTTCGTGCAGCATCGCTGCGACCCGGCCCGCGAGAAGCCGCTCAAGTGCCCGGACTGCGACAAGCGCTTCAAGTACGCCTCCGACCTGCAGCGGCACCGGAGGGTGCACACGGGCGAGAAGCCCTACAAGTGCCCCAACTGCGACAAGGCCTTCAAGCAGCGCGAGCACCTCAACAAGCACCAGGGCGTGCACGCCCGTGAGCAGCAGTTCAAGTGTGTGTGGTGCGGTGAGCGTTTCCTGGACGTGGCCCTGCTGCAGGAGCACAGCGCGCAGCACAGCGCCGCAGCCGCTGCGGCCGAGGGCGCCTACCAGGATTCGCTCTCTTGAGAGACCTCAGCCTCCCTTTTCTCAATGGAACCAGGCTGGAAGTCGAACTGGCCTCTCTCCACCCCAAGGAGGGGGTGGTGCTAGCCCAACCTTCCCAAACGTTTCAGCCTCACTAGAGAAAACAGATAGGTTAGGAAAGAGAAGGGTCACGGGAGGGCCTGGGTGCAGGGTGGCCCCCTTCAGGTTGCTGTTTGAGGGGGAGGGCTAACTCCAGGAGGGAATCCTGGGGCCAGGAAGCAACTTCAGCCAGGGGCAACCCGCCCCCCAGGGTTCTGACAGGCGAGACACACAGGAGTGCTGCACACCTGTGGGCCGGGTCTCTTGGAGAGCAATTGGCCCAGCCAGAAGGGAGGAGGCAGGGAAGTTCTTCCACAACAGGCTCAGTCAGAAACAGTGCTGTCCCCAGGGAAAGGAGGAAAGGCAGCCTTTGCACGGAGGGCTCATCCCAGCGTTTTGGAAGCGCCCCTCCCACCTTTGCCACAGAGTTCCAAGCGCAGGTGGGGAACGTGCCCTCAGCCAGACAGAACTGCTGATGTGAAAGAAGGGGACTGTTAGACCCCCTGGTGCCCAGGAGGAGGAAGGGCCAAGCCCTTCATCTTCCTAGTGGATGGGAACAAGTGTCACTCCCTCACTCAAATCAAATCGTGTGAACCAAAGCCTCAAGGGTGTGGCCCTAATCAGCTCACCCCAGCCCTGCCTCAGGGCCAAGACCATGCCTGGGTGCCCGGAGCAGAAGAGGTAAAAAGAGGGTGGGAATGCCTCTGACCCCACAGTGCCCTCCCAGCCCCTGGGCCCCCTCCCCCATCAGTCTGGCTGCTGGCCTGTACTCCAGGGGTCTTGTGCTGCCAAGATGCTCTGGACAACATCCAGCTATTTCCAAGACCAGAGTGTTCTCCCTCGGGTCCTTTTAGGGTACCCCTAGGTCTCCGGCTACCCACAGGGCTCATGGAGCCTTGGGTGTCCTGGATAGGGAGTGGGCAGGGGAAGAGTGTTGTTAAGGAAACCAGCAGGTAGATGGAGTCAGCTGTTACCACTTGATGGCTGGGGCTCTTCTCAAGAAGGCCAGAAGACGTTGACTGTCAAAATGATTCTTCTGAACCCAGCTCTGCCCCCGCCCTCTCCCTACCCACCTCCAAGCTTGTGGTAAAAGGAGACTTTAATCAGTGCCCACCCCCAAATCCCAGAGGAGCAGGGAGACCCGCCTTGTCCCACTGTCACCTTCCGAAGTCTGAAAAGCCCACATCCACCTCCTCTGACTGGATTCCCTTCCTGTGCCTGCAGAGAGGGGCAGTCCTTCCCCTCGGTGCTGGCTTTAGTCACAATGCCTCAAAAGACATGGAACCCAGGCTGACAACAGTCCCAAGTGCTCATTTTCTTTTTTTTTCCTTTCATTTTGCTTTCTAAAAGCAGTTGTTATACTGTTCATAACATTGTATAGTTTAATTTCATGTCATTTTGGATCTTATCTAAAAATGTGAGGATTTGAGTTTTTAAAAAGAAAGACTCCATTTTAGATAGCCCTTTTTGATGTTAATATATAGTGAGTCCAATGTATGCTTTAGAAGTAAAGACATTGACCTTCACAGACCAAAGCACAGCTTCTTCTGGTCATTCTTCCACAGACGGATGTTGAGCCGTGGAGAGGGGGTGGTGTGCAGGCTAGGGGGGCCAGGCTGGGGACTGGGATCTAAAGCTGGGTTCCAATCCTGAGTCTGGAACACTCTGGTCATGTGACTTCGGTCAAGCCCTCAGTTGCCTCGTCTATAAAATACGGAGATTAACACTTGCCTTGTTTGGTTCTTGTGAGAGTTAAGTGGAGTTGCATATGGAGCTTCCCCAGGGGGGATGTTGTGACGATGCTGGAACCCTCAGGCTGCAACCTCTTGACCTCTATGGGGTTTTGCTGCAGCCACTGTAGAGGGAGCTGGACTGAGGGACCAGCAGCTCATAGATGGTCAGAAGCTGGGGCCTGAGCCTGGTAAGCAGGAG TCONS_00085855 s 3' 55 TCONS_00085855 s 5' 0 EMBV3_40963 GGACAGCCTTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTTGAAG Gene GeneID:523186|PHIP:XM_002690042:14_cdna Constitutive 0 NULL GeneID:523186 9 GENE PHIP NULL pleckstrin homology domain interacting protein EMBV3_06938 TACAAGCTGTTCCAGAAGCAGAAGCAGCCAGCAGCATGCCAGAGGAGACGCTCAATCCTT Gene GeneID:505251|ELF1:NM_001077853:38_cdna UTR3_Alt 2 NULL GeneID:505251 12 GENE ELF1 MGC139879 E74-like factor 1 (ets domain transcription factor) EMBV3_17177 GGAGGTAAAAGGATTTAACAGAGGAACTCACTCAAAGCTAGAGACCATGCAGACAGCTGA Gene GeneID:534898|ANKRD46:NM_001034619:36_cdna UTR3_Alt 3 NULL GeneID:534898 14 GENE ANKRD46 MGC129030 ankyrin repeat domain 46 EMBV3_22369 CTGCACACGAGGAGTCTCAAATACGGAAAACCGGTCTCCCTTACTGATCGAGAGGTGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34542 CTGGAACTTGCCTTAGTATGGTTCCCGTGCCCTCCAATAAACTCTGACCAATCTTGGCTG Gene GeneID:506329|ALDH16A1:NM_001101869:139_cdna Constitutive 0 NULL GeneID:506329 18 GENE ALDH16A1 MGC166224 aldehyde dehydrogenase 16 family, member A1 EMBV3_20358 GTTCCTGTAGGAAAGAGTGGTTATTTGTGACCAAGGGATCCACTTACTACTGGATTCTAC Gene BVV0102_239317 + 0 NULL GK000012.2:61067202-61427921 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26448 CCCTGAAGATACTGTACGTTCTCCGTGGGCGAGTTCAGAAAAGGCTCCGTGAACCCTTAA Gene GeneID:515834|TGFB1I1:NM_001035313:338_cdna Constitutive 0 NULL GeneID:515834 25 GENE TGFB1I1 MGC128848 transforming growth factor beta 1 induced transcript 1 EMBV3_12029 ATTCTCAGATCTGGATTCACCATTGTTCAGTCTGAGGGCGATTTATGGCACAGATGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12904 CAAGCTCAGAGGGTGTCCTATAACGTCCCCCTGGAGGCACGGATGAAAGGAGTTTTATTG Gene GeneID:281450|RELN:XM_002686760:52_cdna UTR3_Alt 2 NULL GeneID:281450 4 GENE RELN MGC152334 reelin EMBV3_39952 GCCTGGTAAAATGCTAAGGATAGGTTGTTTTTACATAGATTCTGCTGAGGCTGACATTCC Gene GeneID:507031|STX7:NM_001077864:5_cdna UTR3_Alt 3 NULL GeneID:507031 9 GENE STX7 NULL syntaxin 7 EMBV3_20638 GTCCCTGTGGAACAAGGTGATGGATTTCGGCTACAGATAAATGCTCAGAACTGTGTGCAC Gene GeneID:768074|ETFDH:NM_001077130:3_cdna Constitutive 0 NULL GeneID:768074 17 GENE ETFDH MGC137231 electron-transferring-flavoprotein dehydrogenase EMBV3_08672 AACTGTTAAAGAAAACTTCCACACCAGTAGCTTCAATGTTGCTTTGTGGCACGTATGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40732 TTTGCCAGGGTGACGTCCAGACAAGAGTATGAGAATCCTTAGTTGCCACACGAATGCCTC Gene BVV0101_070065 + 0 NULL GK000005.2:44886803-45081461 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191713 1 XLOC_117003 NonCoding TCONS_00191713 XLOC_117003 NonCoding NonCoding - 5:45006284-45014807 - TSS143623 747 3 0.912696550105609 0 2.69029765263558e-05 0 0 7.93120625120645e-05 9.57715416381378e-06 1.38702998490932e-30 5.70788333232103e-18 4.96090347165121e-26 0 0 0 0 0 0 0.000106069345151048 8.89004571476292e-05 0 0.000182270590277902 0 4.06379820007416e-06 0 0.00014737431212522 0 0 0 2.35307504298154e-05 0 0 0 NM_001083650.1 ARFIP1 Bos taurus ADP-ribosylation factor interacting protein 1 (ARFIP1), 1e-93 347 90.80 0.327978580990629 XM_005262928.1 ARFIP1 PREDICTED: Homo sapiens ADP-ribosylation factor interacting protein 1 (ARFIP1), transcript variant X1, mRNA. 6e-78 295 89.38 0.301204819277108 0 noncoding 0 0 0 0 -0.0597748439868962 0.690172750727734 0.0306824308543833 0.562260714332903 CACAGATCCACCTTTCTTTTGTTTGCATGACTGAATAATAGACCAATCAGTTCAGGCAAGAGAGACTCTAGGAATGGCTTATACAAGGATATAATTGACAGGAGAAAGAAGAGTTGGGAGGAGCTGTTACAACAAAGAATCCATTGGAGGACCCTGAGAGTTCGAAATGTAGTGGCTCTTCATTGGCTGAGCTGTGATAATCTCTCATTGACTGAGCTTTTGCCAGGGTGACGTCCAGACAAGAGTATGAGAATCCTTAGTTGCCACACGAATGCCTCATTGGAATGAAGAACATGAGATTTCATTTGTGAGGAGGAACCCAAGAAGAGCGATCATTCTCTTCTAACAGCTTATAAAGATGTGAATAGAATTGTTTTTGTTTTCACTTCTTTCCTCAGGACTCTCTCAACAGTCCTAATAGGAGACTGTGGTAAGCAACACAGTCCCCGCTGTACGGGAACAGAATTTACTGCCCTATAATATGTCTCTCTGGCATATTAGTTGTTTTTTGTTTTGTTTTGTTTACTACAGCAAACACTTTTAATAAGAACACAAAATTTGCACAACAGGCATGTTCTGGGGAATGTAAACGAACTATCACAAGTAGTAATTCTGCTGGAAGAATAAAATAAGGCTCTCTCAGAGTACAAATGTACAGGAGGGAATGATTTAAAATAGGTTCATGATTTATAGTCACATTATACTGTGTTAAACACTGAAAACAAGCATATTAATTAAAAAGCCAGC TCONS_00191714 TCONS_00191715 s 5' 65447 TCONS_00191714 TCONS_00191715 s 5' 73969 EMBV3_08043 ACTTATCCGAAAAGCTAGAGAGGCACCATTTGTCTCTATTGGAATGGCAGGTTTTGCAGC Gene GeneID:100295503|LOC100295503:XM_002685369:273_cdna Constitutive 0 NULL GeneID:100295503 2 GENE LOC100295503 NULL similar to HIG1 domain family, member 1A EMBV3_26001 GCCAGTGAGGCAGAATACCGACAGCAGCAGGGAGAGGAGGCCCGGAGCAGCCAGAGTGAA Variant GeneID:508203|ZFAND2B:NM_001098906:65_cdna 766^878 2 EMBV3_30150 GeneID:508203 2 GENE ZFAND2B MGC165690 zinc finger, AN1-type domain 2B EMBV3_31620 TCCCAGTGGGGAGGGGCAGCTGTCCATTTGTCCAAAGTATTAATGCAACTGAAGCTGTGA Gene GeneID:789464|FBXL16:NM_001099212:345_cdna Constitutive 0 NULL GeneID:789464 25 GENE FBXL16 MGC148684 F-box and leucine-rich repeat protein 16 EMBV3_34656 CTGCCTGCCCGTCGTCACGCCCGAAACCGGTGCTAGAAGAGGAACCAGTGGCATCTAAGA Variant GeneID:508271|DSN1:NM_001100323:943_cdna 261^303 1 EMBV3_18581 GeneID:508271 13 GENE DSN1 NULL DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) EMBV3_03536 TCATGTGATGGAAAGGCCCCCATCTGCCCACCCCCAGAAAGGAAGAAGAATCACTGAGAA Gene GeneID:780850|VTI1A:NM_001079792:84_cdna UTR3_Alt 1 NULL GeneID:780850 26 GENE VTI1A MGC152091 vesicle transport through interaction with t-SNAREs homolog 1A (yeast) EMBV3_00740 ACAGCATGCACACAGGTTGAACAAGATGGCCTCATCCTCTCAAAACCCTGCAACAAGTAG Gene BVV0102_176546 + 0 NULL GK000016.2:56734281-56755281 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073340 1 XLOC_045105 NonCoding TCONS_00073340 XLOC_045105 NonCoding NonCoding - 16:56745477-56751245 - TSS55184 5768 2 TCONS_00073340_8 62 0.066747572815534 1 0 0.00050242820156651 0.000261315592286692 0.000125140803448728 4.03114199423998e-05 8.47400263322254e-05 4.96124421519643e-05 9.80713521955456e-05 0.00011074708712699 0.000175777026575049 0.000712260963319062 0.000222250883231417 0.000382488203358194 5.17347994973109e-05 0.000185126106939764 0.000113128620193656 0.00223378449485764 0.00196446866476219 0.00378669087542956 8.32962714436993e-05 8.85214264649686e-05 4.26307153204407e-05 0.000797645089682 0.00107120650205961 0.00140238069749577 0.00023062795552483 0.000113597165251052 0.000136117625327387 0.000457944411457273 0.000297100688144067 0.000337720115966411 NM_172071.2 RC3H1 Homo sapiens ring finger and CCCH-type domains 1 (RC3H1), mRNA. 0.0 2495 77.07 0.548023578363384 0 noncoding 0 0 0 0 -0.0226059440386142 0.877771905410874 -0.020609034408664 0.740028018575821 GTGTTTTGTAGATGATTGTTACCTATCCATAAATGTACACGTCAAGTTCCGTAACTGGAGTTTGAGCTCCTTGAGGGTAGAGAATATTCTTTGTTCTCTACAGTACTGTGCCATATGGGGAGTACTCAGTAAATTACTTTAGTAAATACTGTAGTAAGTATTCAGTGAGTAGTTGCAAGTTCTGATGTGCTAGGTGGTCCCAATAAGGGTGGCAAGTCATTCTAACTGAGCTACCATGTTGGAAAGCAGAGTTTATAAATTGATCATGCAGACTAGCTGGTTACTGGGACTGAAATGCTAATACACACAGACACAAACTCTTATTAATCAATGAGTCTCAGTGTAAAGGATCAGAAAGTAACCTGTTGCTTGTAAGCAGGGTGGGCCTGGGTAAGTGGTTAAGACAGTAGGTCTGGTTTTGGAATTCCCATTCTCGATTTTATTTTAGGCAATAGTTACCATCCCTCATACCCCCTGAGCTTTTTTTTTTTTTGACTGTGGCCACTTCTCTTGAGGTCCAAAATGGTAACAATGGATACATAATGCTAACTGATAGTAGAAGGCCTGATGTTTGTTCACTGGTAATATACATCATTTTTCTTTTAAAAATATTTAGTTATTTTAAAGGAAACTCTACCCACTGTCAGTTATGTGTCTTCTAAAAATATGGACATTTTATTCTATAACAATGTGCTATTATCACACTGAACAAAATGTTATTCCTTTGTTTTTTCTAATAGTCAATGTGTAAGTCAAATTCCCCTAACTAAATCTTTGAATGTTTGGTTTGTTGAAATTAGGATTCAAAGTCCACACAGTGCATGTGACTTTTGTATCTCTTAAGTTCCTTTTAATCTAAAGTAGTCCCCTCCCTTCCCCCGCTTTTTTCTTTAAGCCACTGAGTTCTTGAAGAGGGTATATTTTCCAGTAGTCTCTAAAAACTCTCTAAATGTCAGGACTCATTAATTGGTGGGGATTGCAGGACAATTAGGAAAAGTGAGTAAGAAAGACAAAAAATATTTGCATCAGGAAGGTATTCGGAGTAAGGCCGTGTTGCTTAAGCATAAAGAGGTCCTGCTTTTAAGAGAAGGCATAAAAACCAGAACTTTGCATGTGAACCATGGAGTCTCACTGAACGCTGACTCTAGGATCTGAGAACCATTACCTTTATTCCTAATGTGCAGTCACTGTATAACAAATGAAGGATTCTGGACTGTGGTGTTGGATTAATTCCTGTGAAATCTATAAAACTGGCACTATGAGTATGCGTTTGTGTATATTATCTACTTCTCTATATTTCACCTAAAAAACAAACACAACTCCATAAAAAAGGTACAAATAAGTACATAATCCCAAGGGTTAGAATAAGATGGCACAGGCTCATTTACAAAAAAGACTACGCATTTCTCCTCATTAATTTATCATTTAATATAAATGCTGACAGAAAGCAGATAAAGACCTTGTAGACACTTTCATATATTTACAAACCAAAAGGCGGATCACCTCCGATCACCTCCTTCTACTGGTTAAAATAATCTTTTTATCTGCAACTTGTGGGAGCCTTAAACACTAATTTGGAGCAACATGAGGCTGAGTCAGTTTCCAAGATAATAAAGAAAATAACACCATTTTAACAAAAGTGGCAACTTTGATATAAACAGCATGCACACAGGTTGAACAAGATGGCCTCATCCTCTCAAAACCCTGCAACAAGTAGACTATATACTTACTCAGACCCAGCATTTAGCTGTCCTAAACATCTTTCTATTACTACTTTACCCCACCTCACTTTTTTTTAAAGGCCATTTAAAAACTGAACATATAAACAGATTTTTAAAGAGAGAAAAATGGTCTACTTCAAACACAGGGTTCTTCTTTCCTATTCCCAAAGAACTTCTAGGAGATAACGTCTTCAAATAATAAGATTTCACAGCTTGCCAGATGCTAATTTCACAGCTTGTGAAATTTCAACTCATTATCTGTCTTCACTTTTTAAAGAAAAGTTGGAAACACTTGGAAAAAGTGAAATTTCACAAACTTTAGCAATTTAAAAACGAGCTGTCCCTTTAAGGCTCAATATTTTTAATTCTTAACAGGTGGGTGAGGCAGGCGAGAAAGAACAGGGAGCTAAGGTAAGGGGAAAATAACAGAAATGCACAAAAACTTTTAAAAATGATATTCTGTCTAGCACTAATTTAAGAACAGGAGACATAAATTTTCACTATTCAAACTGTAAATGATTTCATGGTCATTTATAACCTGACTCAAATATAATGGGCTCCTTTATTAACCTACATTATTTTTGTCTTGTTAAATATACCTCTGCAGGGCACAATGACATACAATCAATACGATTGGTAAATTACACAAGCTCTATCCCAAGCAAATATGCATCAATATTAAAAAGTTATTAAAAAAAAAAAACAAAATAAAATCCACCCAAAAAGGTGATAATGACTGCAGAATGTCTCGGGGAGACTGGTATGAGCCTAAAGACCACACTGACTATAGTCAGGGGAAAAGGGGTAACACGGGGAAGAGACCACACACAAGAAGAGAAATCTCACAACTGGAAAATGTTTAAGTGGGTGAAAGGTTTTGTTCATTATCTTAATTCATTTTTTCCATTTCTGTTGTTCTAAAAAGTCATAGATTTACTATAAAGTAAAATAATGAAGCCTATGGATTAGTGGTGGGGTGGGGGTGGGGGGAAAATCAACTTTTTTCTTCTAAGTTCCTTTCATTCCCAGAATGTAGGAAGAAGAGAAAGGATGAAGAAGAAATAAAGGAAATTTAGGCAACAATACACTTGGAAAAAGTAGCTCTCAGAACAGTGTCTTAGTATGAACAGAGGATGTAAACATGATAAGCAAAAGCTTAAAATGCCTTGAAATCAGAGGAACATTTTACAGGGTGGCTCAGATATTACTGTGAGAATGGCAGTCAATTAGTGGAGAAAGATAACGCTAATAAATGGTGATTTCTTAAAAAAAAAAAAAAAAACAGGCTACCGATTATCCACCCAATAGTTTGCTTCCATTCTTTTCCTGATCCTTTCATACACCAGCTGGAGTTGGAGGAGGGGGCCACCTGACAGTTTCCAGTTATAAGATGACTCTTGAGTGTACAACCTAGAATGGATGCCAAAGACTTGTGAGCTCTGTCTACTTAAGAGTTTAAATTAAAACAAAACCAAACCAAAAAGAAAAAGAAAAAGAAAAAACCACACAAAAAACCCCAACTAGAAACAATGAGACCTCAATACAAGAAAATAAATCACCTTATCTAGTATATAACATACATTAGGACAACAAACTCCACAGGATTTTATTTTTCTAAATACATATTTTGGACACAATATTTTGTCGTGAGGCTTATTTTAAATTCTCTCTCTCTTGGGTTATTGTGCCTTATTTTCTTTTGAAAATAAAAGTTATTAATCTAGGGATGTTCTGCTCAGGAATAAAGTTTAGGGGAAGGTCAGTGTTTGGCTGAAAACTCACAAGCTCTGTAATTCCAGTGGTGAGGTTAGTCCCTTTATCACAATAGAATTTCAAAGGGATCTTTACCCACTTTGTTCAGTGCAGTATTGAAAACTCACCCATTGGGAACATATTTATTATTAAAAGGTGTTACTTCTTGGTGGTGGCAGTTTTTTTATAAAGTAAACTTGCTGCTAGTGTTACTCAGTTAGAATCTAAAACATGTGAAAACATCTTTAGCAAAGAAAATCTTAAGAATCAAATTGTAAGCTGGCATTTACTATAATTAATAGTGTCTTTTGACAAAAACATCTTTCTTTTTCCAAGTGGCTCAGGAAAGTTGAAATAAGAATTTAAAAAAATATATTAACTGCAATCCACCTGTAATTCCCAATAAGTAATTTCAGCAGGAAATTTTCATAAAGCTGAGTTGAAGCCACAAATAAATATAAAAACCATAGTTGTCCAAGGCAGAAAAGTGTGCATATAGGCCAGCAAAATGCACAGTCAGGTAAAATAATGACAGCAGTAGACTGCTTACTTTTTCAATCCCTAATGTAGAACATAGAATATGCTTTAGTTTAGAAGCCCTAATTTTTACCTAAAAGGATAGGCAGATTTTTCATGGAAGATATCACCTTGCAAACACAATAATCATCTATCATCAATAACAACAAAACACAATTGGACTTTTAGGGTAAAAATCTAAGTAAACACTGCAGTTAATTTCCACCTGTAATTTCCACCTGTAGGTTCTTAATTTCCCCTAAAAAGTAACTGGGCCTTTTAATGACATATAAAACATTACAAGTGCTTTTCACAGACACAGTTTATACATGAAACCTTTACTCAACTCTTTAAAATGAGCAAAAAGAAAGCAGAAAAGAGATGGTTAGATCTCCATCTATCACCATTTATATATAAGCAATAGCAACCGAGTACTCTTTATCTTTAGTGAAAAGAATCTCTTTTTCTCTGAATCTGAATATAATCTAACAGGTACGAACTACAGTTAATTATTTTTCACCAATCACATGTTCATGGATTCTTTTACTCAGTCCCAAGACTTGATCATACTGACAGTAGATTGTCTTATAGGCACAAGTAAAACAAAAATATAACAAGCTATCATGACAAGACAATCTCAGTATATGGGGGCAGGAACTGCTTACACACAATACTGTAAAAGATGACATTCATGGTTTTAGAAAAACTGATGGGTTTTCATTACTTTTATATTTTATAAGGCCAGCTAACTTTCAGAGTCAACTTTAGACCTATCTCCCTACACAATATAATCAACTCATGAATACTAAAAGGTTTCACAATCAAAATGGCTATTTCCTCCCAAACCAAAACAGAGTAAAGCACAAGTCTTTGGCTCTCCTTTAAAGAAAACAGCAGGTTACCATTCCTAACCAGACCTTTGTTTTGCCTACCAGTAGGGCAAATACCACATTTGTGCATCACTGAGTAATAACACCATTAGAAAAGGCAACTTCACAGAAGTTATTGGCTAAGCGAATTCATTTGAATGCTCTGTTTTGAGGCAGCAAACTGTCACTGTTGCAGATTGGGGAGGGCAGTGGGTAAATCAAAGGGAATTTGCAAGATAGAGAAGGGCCAGAGAAAAAAGAAAAACAAAAGCAAACTTTGAGCTCCAACTTTGAAGACCTACGGAAAATCTGATGGAGTTACATATTCAAGATAGCAAATGCGAATCATACCAATTTTAGGTCTTTCAGACCGAAAAAAAAAAAAAAAAAGGGAAAGACTAGGAGAAGGAAAGGGAAATAAAATGGGAAAAGGAAATTAGCCATATTAATGCTGTATGAAATATATTTTTATACTTTGAGTAGTTAAGTATGTTGTAGCTGGTATTAAAAATAGTGTCTTACTATTTGAATATTACTAGAAACCTATAACTAATTTTTCTTTTGATTAGAAAAGTAACAAGGAATGGATCTTTGGTCACATCAGCCTCTGTAAATTACCCAAGACATTGCAGCTACTGAACTTATGACAGTATCTACAAGCAAGGAGAAAAAACTACATATAGGTCAGAAAATTGAGTCTAGATATCTTATTCTCAGTTCTTCTACCCTTTTCCTAAGACCCACTGAATAAAGAAAAGGTCAAAGTACTTTTATACTCTGGTTATAATAAAATTATGGTGTTATCCAAACAGAACTGAAAGAAATGCTTATTACTCCTACCTTAACCCTTCAAAAGTGTTCATTTTCATCAGATGTCTGAGTATTGCCTTATAATTCAGAAGAAATTANN TCONS_00069746 TCONS_00069747 TCONS_00069748 . 3' 1266 TCONS_00069746 TCONS_00069747 TCONS_00069748 . 3' 7033 EMBV3_29613 TTGTTTGCTGCCTGGGCGGCCAACCGGGTTTTGAAACCCATGCACCCTACTAAGTTTCTA Gene BVV0102_203716 + 1 EMBV3_16013 GK000007.2:88995994-89281001 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17984 TTAAAGGCCAAAAACTCCTAAAGTGTCTCCCGAATGCCATGGAAGCAAAGGTGGCCCTGG Gene GeneID:515150|LOC515150:XM_002693873:144_cdna Constitutive 0 NULL GeneID:515150 16 GENE LOC515150 NULL similar to C4b-binding protein alpha chain precursor (C4bp) (Proline-rich protein) (PRP) EMBV3_18069 TGACTTGACGTCCTGCCCGGCTGTTGATCTGTTAGTTTCTTCCTGCACTGAGAGCTGCTT Gene GeneID:516073|C14H8ORF55:NM_001099375:98_cdna Constitutive 0 NULL GeneID:516073 14 GENE C14H8ORF55 NULL chromosome 8 open reading frame 55 ortholog EMBV3_43688 TGGAGACGGCAGACAAGCAGGCTCTGCACTCCGTGTCGACCAGTTAAAGTACGACGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36508 TTTATAAGCAATGATACTATTTATTATTAGGTAATTTGTCTTGTTAAAATATAATTTCAG Gene GeneID:781265|CDH19:NM_001099181:127_cdna Constitutive 1 NULL GeneID:781265 24 GENE CDH19 MGC159825 cadherin 19, type 2 EMBV3_41996 CCAGAAACATATCCATTTAATCCCCCTAAGGGCAGCAGCAATGACTCTGCGCACGGTATT Variant GeneID:281225|UBE2K:NM_174080:2_cdna 243^325 2 EMBV3_32020 GeneID:281225 6 GENE UBE2K E2-25K HIP2 HYPG LIG ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) EMBV3_28124 TGCAGCAACTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACT Gene BVT0102_445382 + 0 NULL GK000004.2:61192414-61199755 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23201 ACCATCAAGTGCCTGCTGATCCACCCCAACCCCAGCAGGGGCTGAGGGGCCCATGGCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05749 ACTTCCTCCCAGGGTTTCTGTCTCTTCCACATTTATGTTTCGGCCAGGGCTTGGTGGTCT Gene BVT0102_229252 + 0 NULL GK000021.2:61183401-61304010 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31613 TGGTGCATATACCATCCACAGGGCTCAGTTAGAGGATGCGGGAGTATACCAGTGTGAATC Gene GeneID:282118|VCAM1:NM_174484:29_cdna Constitutive 0 NULL GeneID:282118 3 GENE VCAM1 NULL vascular cell adhesion molecule 1 EMBV3_38239 CCCACTGGCATTTGACATGTGAGGACTCTTCTGTGCAACTCATCCTTCTCACAAAAAGCT Gene BVV0101_036212 + 0 NULL GK000004.2:88194753-88250495 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07735 GTACAGGCACAAGCAGAGGGTCCAAAACATTCACAGCATCAAGGTCTCCTCCATATCCTC Gene GeneID:100140561|BOSTAUV1R411:XM_002695267:3_cdna Constitutive 0 NULL GeneID:100140561 18 GENE BOSTAUV1R411 NULL vomeronasal 1 receptor bosTauV1R411 EMBV3_08353 CCTTAACCGGAGCCATCCTGGCGGCAAGAAGTCCTCCGTTTGCTGAAGACCCCTCCCAGT Variant GeneID:509797|TIMM17A:XM_002694116:448_cdna 494^604 4 EMBV3_41583 GeneID:509797 16 GENE TIMM17A NULL translocase of inner mitochondrial membrane 17 homolog A (yeast) EMBV3_23366 CGGATCTGTCCTCTGGTGCTGATGGCTGTGTTCACTCCGGTTTTCTGCTCAGGGTCTGAA Gene GeneID:506002|UBTD1:NM_001034261:81_cdna Constitutive 0 NULL GeneID:506002 26 GENE UBTD1 MGC128484 ubiquitin domain containing 1 EMBV3_12176 CCCCTGCCCTGAATCTGAGCCAGCACCATGCGCCAGGCTGGAGAACTGGATGAGTCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22059 CCAGCCTCATTTAGTGAACATACAATTCAGCAACTTGAATTGGTGGAACCAAGTGGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17281 GAGATAAGCTCAAGGGCACTCGGCAGCTCCATCAGCCACTTCTAGTTACACAGCTGGAAT Gene GeneID:510757|TTC5:NM_001075464:43_cdna Constitutive 0 NULL GeneID:510757 10 GENE TTC5 MGC140562 tetratricopeptide repeat domain 5 EMBV3_19966 TTTCAGTATCGCCCAAGCTTCTCATCGGAGCTGAAACCCAAGACGGTGATAGGGGACCAT Gene GeneID:512098|CES1:NM_001075554:198_cdna Constitutive 0 NULL GeneID:512098 18 GENE CES1 CES MGC142628 carboxylesterase 1 (monocyte/macrophage serine esterase 1) EMBV3_15586 CCCTAGGGAAGTTAACCTGAATTGGAGTTACCGAGGTAGCTGGCTAGAAAACTGAGACCC Gene BVV0102_202293 - 1 EMBV3_33808 GK000007.2:21196341-21204176 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215988 TCONS_00215989 TCONS_00215990 TCONS_00215987 TCONS_00215991 1 XLOC_131141 Coding TCONS_00215989 XLOC_131141 Coding Coding PIAS4 7:21202908-21227532 j TSS161200 2653 1 TCONS_00215989_4 358 7 0.892539495593551 0.00185423527243091 0.000602865442368597 0.000748023734601758 0.00143950206288055 0.000513478134091948 0.000239504095809321 0.000319935088061605 0.000119472215759939 0.000101503160373593 0.000482707366308538 0.000338394905491502 2.97241500074023e-05 0.000312663159129119 0.000361012886020867 0.000194586779058006 0.000766021524491954 1.51049131856071e-06 0.000566678092239577 0.000799280130754178 0.00117988898059068 0.000188081181882513 0.000806531588550795 1.59309958165686e-08 0.000348683617453843 0.000768858912848819 0.000621257230175395 0.000137078157734109 0.000448703395386099 0.000300904828125262 0.000184374714578465 NM_001083482.2 PIAS4 Bos taurus protein inhibitor of activated STAT, 4 (PIAS4), mRNA. 0.0 1258 94.64 0.279306445533358 NM_015897.2 PIAS4 Homo sapiens protein inhibitor of activated STAT, 4 (PIAS4), mRNA. 0.0 928 85.40 0.278175650207312 TCONS_00215989_4 sp|Q8N2W9|PIAS4_HUMAN PIAS4_HUMAN E3 SUMO-protein ligase PIAS4; 4e-166 479 90.11 0.692737430167598 1 coding 1 0 1 1 -0.0457685794673692 0.7420966807449 -0.0204018528776709 0.778669246149673 CCGCCCGCGAATGGAGGGCGATCACGTGACGCGACGGCTGGGGGCTCCCGGCGCGGGGGACGCTGGTGGCCAAGATGGCGGCGGAACTGGTGGAGGCCAAAAACATGGTGATGAGTTTCCGAGTCTCCGACCTTCAGATGCTCCTGGGTTTTGTCGGCCGGAGTAAGAGTGGACTTAAACATGAACTTGTCACGCGGGCCCTCCAGCTGGTCCAGTTTGACTGTAGCCCCGAGCTGTTCAAGAAAATCAAGGAGCTCTATGAGACACGCTACGCCAAGAAGAGCTCAGAGCCTGTACCCCAACCCCACCGGCCCCTGGACCCCCTGACCATGCACTCCACCTATGAGCGGGCCAGCTCGGTACCCAGGACTCCCCTCACAGGCCCCAACATTGACTATCCCGTGCTCTACGGGAAGTACTTAAACGGACTTGGACGGTTGCCTGCCAAGACTCTCAAGCCAGAAGTGCGCCTGGTGAAGCTGCCCTTCTTCAACATGTTGGATGAGTTGCTAAAGCCTACCGAGCTGGTTCCACAGAATAACGAGAAGCTTCAGGAGAGCCCCTGCATCTTCGCCTTGACCCCCAGACAGGTGGAGCTGATCCGGAACTCCAGAATCTGCTATTCAGACACCAGCAGCCCTCAGGAAGACCAGTACCCACCCAATATCGCCGTGAAGGTCAACCACAGCTACTGCTCGGTGCCGGGCTACTACCCCTCAAACAAGCCTGGAGTGGAGCCCAAGAGGCCGTGCCGCCCCATCAACCTCACCCACCTCATGTACCTGTCCTCGGCCACCAACCGCCTGGTGGACGGCTCGTGGTGCCCGATTCGCGCCGAGAAGGAGCGCAGCTGCAGCCCCCAGTGCCCTATCCTTGTGCTCGGCACCTCGGACGCCAATGGGCTCCTCTCTACCCCCAGCGTCAACGGCGGGGGCGGCAGCGTGCTTGGGGGTGCGGGCAGCGGAGGCGGCCCAGTGGGCAGCGTGGAGAATGGGAAGCCGGGAGCTGATGTGGTGGACCTAACGCTGGACAGCTCGTCGTCCTCAGAGGAGGAAGAGGAAGAAGAGGAGGATGAGGAGGACGAGGACGAGGAGGGCCCCCGGCCAAAGCGCCGCTGCCCCTTCCAAAAGGGTCTGGTGTCGGCCTGCTGACTGCTGGCCGCTGCCATGCCAGCCGGACTCTCGACTTTCCTGGTGCTCACCACTTGGAGGGGCACAGGCGGGCCTTGGGCACAGAGGGAGGAGTGATTTTTTTTTCTTTTCATTGTTGTTCATTTTGTTTTTTCCACCCCTTTCCCTGGCTCCTGGCACCTGTACCTCTGGACTCTCCCATCGGAGGATTAAAAAAAAGGAAAATGACAAAAAAAAAGTATAAAAAAAGAAAAAGAAAACAAAAAGCAAACTGAAAAACAAGGCAAGCCACCCACACAGCCGCTTCCCTGGCCAGTGTCGGAGCCCAAAGTCGGAGCCGACCCTGAGGGGAGGCCCAGGACGCCTTGACCCCGGACGACCATTCCAGCTGGTGCGAGGGACCGGGTGGTGGGAGTTCAGGGAGGACTGGCAGCCAAGTGGCCTCTCCCTGGCAGCGGTGGCAGCAGTGGCCACAAGTCTTGACATTCATCTGTTCCTTTGCTTTCTCTCTCCCTGCTAACATGCTCTCATGAGAGCCCAGAGCAGGGAGCCTCTTAGCCAAGAAGCCATGGAGTGGGTGGGGGTTGGGATGGGGCCTTGGGGGGGCAGGGGTGGGCAATGGGGGGACGTGGGGGGCCTGGGAGGGTTTAGCCACAGATGTGTTGTATTTTTTGAAAGTGCAATAACTTGGTATTTTGAAGACTCGGCATGTGGCCAGGGCCCCCCCCACCCCCCTGGCAGCAGGCGGGGGCCCCAGGGCGCGGCACCGTGTGGCGTGGTGGGGGGGTGGGTCTCAGTTTTCTAGCCAGCTACCTCGGTAACTCCAATTCAGGTTAACTTCCCTAGGGAACAGTGCAGGTGTCCACGGACACCGCCTCCTCGGTGGGGTGGGGGCTGCCACTTCGGAGGGGTGGCACGGACCTGCCTGGCCTCTCCATTTGGGGTGGTTCCTCCCCCATCTTCTTGCTCTTGGGTTTTCCGACGGGTACAAGGCCTGCCCGGCTCCCCCCTCCCCCGGGAGCCTCACTCTGGTCTTCCAACAGGACTGGGCGTCAGCTCCCCGCCCGGCTCCACCCGCCCCCCAGTGGCTCCCAGCCTGGGGGGTGGTTCAACGACCATGGGGGCTCCCGCAGCGGCCCCAGACGCCTCCACTGGGTGCCCAGCCCCCCGCCCAACACCCTTGTCCCCTGGAGGCCGCACCTGGTTCTCCAAGACCGCCTGTGCCCGCCGCTCTTTTTTTGCTTTTATTCTTCCCTGCACCCCTCACCCTCAGACCCCAGAATAATTTTTCTTTGTATGAACAGAACTCTCCTAGTCAGGAAGCAATATCATTTCAGGTCTAGAGAAGAAAGGGACGTAAATCTGGTCGAGGGCAAATTCAGTTTGCTGTATAAACTCGGTTGCGCAGTTCGGCCCCCCCTCTGTCTGCACCGGCAGCTGAGGGCCACTGTTTTCTAATATTTGTATTCTAATTTAATTGTTTTTTAAAAACGCAAATAAAAAAGTCAAGGTGAAGCTACCAT EMBV3_25236 GGTCTGACGGGAGCTTTAACACAGGATGATCGAAAACCTTACCCATGACACCTCTGAGCT Gene BVV0102_261556 - 1 EMBV3_38503 GK000030.2:147827072-147944472 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246052 TCONS_00246050 TCONS_00246051 TCONS_00246053 1 XLOC_150889 Coding TCONS_00246053 XLOC_150889 Coding Coding NLGN4Y X:147497063-147828950 j TSS184573 5812 1 TCONS_00246053_5 835 9 0.982515080479442 0.000183043956562874 1.21252314948958e-21 8.61904989171114e-05 5.31168547690144e-24 0.000295981872970088 2.1570323363502e-05 2.3527567631474e-10 3.30105998985192e-05 2.83551050840417e-12 2.76637723524924e-33 4.95277320546498e-79 6.11174505933202e-30 1.12559349365124e-40 2.40958999303609e-100 3.35399291290217e-07 9.13423368023226e-23 1.28794903378076e-20 8.0680174980585e-70 7.94471664970491e-32 1.28044490420026e-46 2.50218524268093e-10 3.23035562278663e-21 2.45035019951281e-71 1.19290472815325e-28 3.62003547540138e-06 0.000448543424599193 0.000354354196629536 1.90087831291481e-12 2.86918178119214e-13 1.06153012358898e-85 XM_005228540.1 NLGN4Y PREDICTED: Bos taurus neuroligin 4, Y-linked-like (NLGN4Y), 0.0 1.041e+04 100.00 0.992601514108741 XM_005274564.1 NLGN4X PREDICTED: Homo sapiens neuroligin 4, X-linked (NLGN4X), transcript 0.0 3355 77.16 0.737783895388851 TCONS_00246053_5 sp|Q8N0W4|NLGNX_HUMAN NLGNX_HUMAN Neuroligin-4, X-linked; 0.0 1661 95.22 0.998802395209581 2 coding 0 0 1 1 -0.177630550781281 0.25878869357487 0.0137366074168948 0.791568080840896 CTTAGACACTAAAAGCCAAAATCCAGAAGCCCGACCATCTCATTTAGAAGATAAACCCGGCCCGGTATCTGCTGGACCTGCTGCCCAGGGCCATTTGGAATGGCTGTGAACACCTCTAGGAAACCCCAGGTCTTCGGTCGTAGAGATGACATTATTTGGAGAAGCTTCCTTGAATCGTTGTCATAGAGTGGAGTAGACCGTTCTTAGCTTCTGCATCGAATATTCTGCTAGAGGGGAGAAATGTGCTGAGATGGAAAAGCAATCAAGTAGATTTTCATGGAGGCATTTTTAAAAGCATCTTCTTAGAAGGACGATGTAATGGCCGCCTGCTGTGCGTCGGCGTTCTTATAAAGGATCACTGTTGCTGGGAGGTGCTGGACTGGCCTGGCATCTTTGGAGCCCTGCAGCGGCGGGAATCCAGTCCGAGGATTAAGGCAGCGCAGCGGTCTTGCGATGGGCGGTCAGGACCACCGCCGGGCTGGCTGTTGATCTTGGGCTCTGTCTATGCCTCATCGGGAGTGGGTCTGCAGGAAGCCCTTCGCCTTTCCCGGCTCTCGGTCTTTGGAAGCCCCTCTGTCTCCCCGAGGGCACCCCCTCCCAACTCCCCTGTCTGGTCTGCTCAGAGTCTCCGCCCCGGACGCCCCACCCACCCAACCCCGGATGTGCACGTGAGCCATGTCGAGACCCCAGGGACTGTTATGGCTTCCGCTGGCCTTCACCCCCGTCTGCGTCATGGTCAACTCCAACGTCCTGCTGTGGATCACCGCCCTGGCCGTCAAGTTCACGGTCATCGACAGCCAGGCCCAGTACCCCGTGGTCAGCACCAACTACGGCAAGATCCGGGGCTTGAGAACGCCGCTGCCCAATGAGATCCTGGGGCCCGTGGAGCAGTACCTGGGGGTCCCTTACGCCTCGCCCCCCACCGGGGAGAGGCGCTTCCAGCCTCCCGAGCCCCCCTCCTCGTGGACCGGGGTCCGCAATGCCACCCAGTTCGCCGCCGTGTGCCCGCAGCACCTGGACGAGAGGTCGCTCCTGCACGACATGCTGCCCGTGTGGTTCACGGCCAACCTGGACACACTGATGACCTACATGCAGGACCAGAATGAAGACTGCCTCTACCTGAACATCTACGTGCCCACGGAGGACGGAGCCAAGTCAAAGAAAAACGCTGATGGTATAACGAGTAATGACGGTGGTGAAGATGAAGACATCCATGATCAGAACAGCAAGAAGCCGGTGATGGTGTACATCCACGGCGGGTCCTACATGGAGGGCACGGGCAACATGATCGACGGCAGCATCCTGGCCAGCTACGGCAACGTCATCGTCATCACGATTAACTACCGGCTGGGGATCCTAGGCTTTCTGAGCACCGGCGATCAGGCGGCCAAGGGCAACTATGGGCTCCTGGACCAGATCCAAGCCTTACGCTGGATCGAGGAGAACGTCGGGGCCTTCGGTGGGGACCCCAAGAGAGTCACCATCTTCGGCTCGGGCGCAGGCGCCTCCTGCGTCAGCCTCTTGACCTTGTCTCACTATTCAGAAGGTCTCTTCCAGAAGGCCATTATCCAGAGTGGGACCGCCTTGTCCAGCTGGGCCGTCAACTACCAGCCCGCCAAGTACACTCGGATCCTGGCAGACAAGGTGGGCTGCAACATGCTGGACACCACAGACATGGTGGAGTGCCTTCGGAACAAGAACTACCGGGAGCTCATCCAGCAGACCATCACGCCGGCCACCTACCACATCTCCTTCGGGCCCGTCATCGACGGGGACGTCATCCCCGACGACCCTCAGATCCTCATGGAGCAGGGCGAGTTCCTCAACTACGACATCATGCTCGGCGTCAACCAGGGCGAGGGGCTCAAGTTCGTGGACGGCATCGTGGACCACGAAGACGGCGTCACGCCCAACGACTTCGACTTCTCCGTGTCCAACTTTGTGGACAACTTGTACGGCTACCCGGAGGGCAAAGACACCCTGCGGGAGACCATCAAGTTCATGTACACGGACTGGGCGGACAAGGAGAACCCCGAGACGCGCCGCAAAACCCTGGTGGCCCTGTTCACGGACCACCAGTGGGTGGCCCCCGCCGTGGCCACCGCTGACCTGCACGCCCAGTACGGCTCGCCCACCTATTTCTATGCCTTCTACCACCACTGCCAAAGCGAGATGAAGCCCAGCTGGGCGGACTCGGCCCACGGCGACGAGGTCCCCTACGTCTTCGGCATCCCCATGATCGGTCCCACCGAGCTCTTCAGCTGCAACTTCTCCAAGAACGACGTGATGCTCAGTGCGGTGGTCATGACGTACTGGACCAACTTCGCCAAGACCGGTGACCCCAATCAGCCTGTTCCACAGGACACCAAGTTCATTCACACAAAACCCAACCGCTTTGAGGAAGTGGCCTGGTCCAAGTATAACCCCAAAGACCAGCTGTATCTGCACATTGGCTTGAAGCCCCGCGTGAGGGATCACTATCGAGCCACGAAAGTCGCCTTCTGGCTGGAACTGGTCCCACACCTGCACAATTTGAATGAGATATTCCAGTACGTGTCTACCACCACCAAGGTGCCCCCTCCGGACATGACGTCCTTCCCCTACGGGACCCGGCGGTCGCCCTCCAAGATCTGGCCCACGACCAAACGCCCGGCCATCACCCCAGCCAACAGCAACCCCAAGCACTCCAAGGACCCTCACAAGACGGGGCCCGAGGACACCACTGTCCTCATCGAGACCAAACGGGATTACTCCACCGAGCTGAGCGTCACCATCGCCGTGGGGGCGTCCCTGCTGTTCCTGAACATCCTGGCCTTTGCCGCCCTCTACTACAAGAAGGACAAGAGACGCCACGAGACCCACCGGCGCCCCAGCCCGCAGAGGAACGCTGCCAATGACATCGCGCACATCCAGAACGAGGAGATCATGTCCCTGCAGATGAAGCAGCTGGACCACGAGTGCGAGTCGCTGCAGGCCCACGACACGCTGAGGCTCACCTGCCCGCCGGACTACACGCTCACGCTCCGCAGGTCTCCCGACGACATCCCACTCATGACCCCCAACACCATCACCATGATCCCCAACACGCTCACGGGCATGCAGCCGCTGCACACATTCAACACCTTCAGCGGAGGCCAGAACAGCACAAACATACCACACGGACACTCCACCACCAGAGTATAGCTCTGCAGTCCCCTCCTTCCCCTCCCCGCCCTCTTGCCACCCCGCCCCCTGCCACGGGAAGAGGGACAAAGAAGCACCATCTCCAAACAAGGAATGTGTTTCATCCCACTGGCTTAAGACACACACACACACACACAAACCCCAAAAGGGCAACCATTGTGTCTTTACAGACCTCCCATGCTGGCATTTCCCGGTACCACGAGATCAACTTTCAACCCGACGAAATGTGAAACGGTATCCATTCGCTGTCACAGTTCTGCTTTTAAGACCCACCACCATCCAAGCCGACTTGAGCGCGACAAGGACGTCCACGAATCAAGGACCTGGGCGTTTCCAACCGTGACCGTAGAAGCTGACACCTTTCTGGAACTCAGCCAGGGACACTAATTCTTTTTTTTTTTTTTTTTAAATCACAGTTGAAAAAAAAAAAATAAAGTTCTTTATGTGCCACACGACAGATGGCTCTCCTTAAGTGAAAAACAAACGAAAAGAGTCTGTGGGCTTTTACCCAGCATACAGAGCAGTAATCCAGAAAAGAAGGAAAAGTAGAATTTTATTATTAAACGAACAGACTATTCAGTTACATACCTAGAGTTTTGTGCAAAGAGATGTTTTGCCAGCCTGAACTATATTTAAGAAACTTTGTAAAAAAAAAAAAACAGAAAGAAAGAAAATGTATATAGCTGTGAGTTTAAACAAAACGGAGAGAAAAAACAAAACAAAAAAAAAACAAGCAAAAAAAAAAAAAAACGCTTTTATTGGTGTTTTCAGTTTGAAAGAGCTTTTAGCAAGGTTGTGCTTTCTTCATTGTGGTCTGTATGTATATAAATCGGTATATACATTAGTCATATCACGTCTGTTCCCTCCAAGACACAGAGGGGCTTTTTCTTCTTAAATCCTTGTGGCCAACAGACACGGGGTTTTCTAAGGCATTTCATTTGTAAGAGGATATGGTTGTCACGCGGCGGACTCTGACCGTCCCTGTGACCGGGCTCTCTCCCCATTTTTTTTTTTTTTTGTTTTTGGGCTGGAAAGTGCATGCGACGGCATTCTTAGAAGACTGTTTTTTTTTTTTTTTTTTTTTTTTAGGCAAACTTTTATTTTTGGGTTGTTAAAGACTTCATGAAGTTGCAACCGCTCCCCCACCCCCCGCAAGAAGGATCCCCAGCGTGGAGTCTATTTAAAAGCTTGTTGACTTAGATACGCATACTCATGCAGAGAAATCGCAGGGCCTGGGAGGGGAGGGTGTGGGGAGCAGAATACAAGTCTCGTTCTGTAGCTGTGGCTCTTTGAATCTGTTAAGGAAGAGTCGCTTCCCACACCCAGGGTCCTGCCAAAAGAGAGAAAGAAAGCTTGTGTTTGGTGGGCCGGCGGTCTGCTGAGTCAATACATCTCTGTGTTCCCCGGCAGCTGCAGAAATACCTGTTCAGCTTAGCTAATCAGATCGAGGGAGGGGGCATGTGTCTTTCCTTTCTGGTAAAAGCAGTCAAGTCCATTATTTATCAGTAAGCGGGGTTTTTTTTGTGGTTGTTGTTGTTTTTGAATTCTTTGGATCATTTATGGGGTAAAACATTACGCTTGTCTGAAATGGTTATCTTTTGTGCATTTTGCGTATCCGTCACTGATCCGGGACTATCACAGACAGGAGACCAAGGAAGGGAGAGAACACTCCAAGGGCTTTGTGTGGGTTTTCCAGGAAGTTAGAGAATGGCTTGACTGTCAAGATAACACACGGAAATATTCAGCCATTCTTCACTGATGAGGTGGGGATGAGAATCTCGGCGCCTCCGACACCAAGTCATTTTCTTATGGTCGTTTTAGCTTTCCTTAAGGGATATCACGCAGGTATCGTTAAGTCGAAGGAAAATCGATAGCAACCACGGTGACTTGAAGTTTTGGCTTTCAAAAACCCATCGCCAAGCCAGGAAATAGTAGCCAAAGATGGGATGTCTTGGGGCGTGGTTATCAGAGCAACTCAGCTAAGGTGCACGTTCTCAAGAAAGACAGTCCAAATTCCTCGTCCCTTGGTACAATCTTTGATTACCGGAACCCCTAGACTAAAACTGTAACAGCACTTCTCCAAAGTCTTTGAAAATGACGGCCCTCCACCCCGCAACCCCCAGAAAAACAGAGTTCTTAGGAAGTCAGTGCAGACCGATCTCCCAGCAAATTCTGCTGTTCATCTTGGTTCAGATTTTAAGAGTGAGTCTGTGTACGTGAAATGTAATCCCAACTTTGCACAGAGTGAAGTGCACACTCCTGCAGCTCAGAGGTGTCATGGGTAAGGTTTTCGATCATCCTGTGTTAAAGCTCCCGTCAGACCATTTCTGCAAGCCATGTATTTATTACCCCAGCTAAGTGACCACAAATAGGCTGTCCAGGAAGTTACAGGGGAAGTGGCACTCGACAGCCGTGTGGGACCGGTCTGTTTGTGATGTGAATTTCAGTATTTGTTTAGTATTTCCAATCGTCTTCTGCTAGCAATATGCACAGTAATGTATCAGGCTTGTGACATTTGGATAAGGAAAAAAAAAAAAGAGTTCTTGTTAAGTGAATAACTTTAGCTTTTACAAAGGGTTATGATCAAAAGCAATTTAATACACCTTAAATGATATCTTATTTCTACATG EMBV3_02152 GAAATACTGGTCTATTCCAACTGGGCCGATGGGGAGCCCAACAACAGTGATGAGGGACAA Gene GeneID:281068|CGN1:NM_175699:206_cdna Constitutive 0 NULL GeneID:281068 28 GENE CGN1 BC conglutinin EMBV3_27862 CATGCTCTATGTACCCAAGACCTACGTCATCCTCTTCCACCCGGAGCAGAACGTGCAGAA Gene GeneID:529656|GRM6:XM_002688502:120_cdna Constitutive 0 NULL GeneID:529656 7 GENE GRM6 NULL glutamate receptor, metabotropic 6 EMBV3_17342 AAGCCACAGACATCGCCATCCAGGCAGAGGAGATCATGAAGCTCAAGAAGCAGCTCTACA Gene GeneID:535981|CLPP:NM_001046414:75_cdna Constitutive 0 NULL GeneID:535981 7 GENE CLPP MGC137504 ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) EMBV3_30423 TGATCATTGCTCTCCACCCCAAGTACCACAACTGGCTTGCTGCTTAAAAGGAGACTTAGC Gene GeneID:520949|LRRTM2:NM_001099377:13_cdna Constitutive 0 NULL GeneID:520949 7 GENE LRRTM2 NULL leucine rich repeat transmembrane neuronal 2 EMBV3_34848 ACAGGCCAAAGCCCGACTCCTCCGACCTTCGCTGTGCAACTGATTATATTGCGAAAGGCG Gene BVT0102_315556 + 0 NULL GK000002.2:20859016-20918859 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11157 AGACCTACCTGAGCCCCGAGGGACCATGGAGCATACCAACAACAGGATTGAGAACATCTA Gene GeneID:614780|TNFRSF8:XM_002694054:152_cdna Constitutive 0 NULL GeneID:614780 16 GENE TNFRSF8 NULL tumor necrosis factor receptor superfamily, member 8 EMBV3_43011 GACACTTCAAAGAAAGTATTAAATTCATCCATGAGTGCCGTCTCCAGGGCGAGGGCTGCC Gene GeneID:787471|LOC787471:XM_002697612:109_cdna Constitutive 1 NULL GeneID:787471 23 GENE LOC787471 NULL similar to dual specificity phosphatase 22 (predicted) EMBV3_02590 CCCGCGAGAGGAAGACCGTAGGGCTTTCAGGTAGCATGGCTCAGGGCCTGATTGAAGTGG Variant GeneID:282090|THTPA:NM_174470:35_cdna 80^223 1 EMBV3_12785 GeneID:282090 10 GENE THTPA MGC128756 thiamine triphosphatase EMBV3_15704 CTTCTGATGGTCCAGATCCTTGTGATATGGTGAAGCAACCCAGATACCGAAAAGGGCCTG Gene GeneID:282608|CACNA2D1:XM_002686733:5_cdna Constitutive 0 NULL GeneID:282608 4 GENE CACNA2D1 NULL calcium channel, voltage-dependent, alpha 2/delta subunit 1 EMBV3_07311 CATCCTTTCCTGGCGCACATCCGTTCTCCATGAAGCCTGTACTCTGGTTGCCTTGAATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26371 CTGCTGTGGAGGCTCATTGTCTTAACCACTGGACTGCTGGGGAAGTCCCAAAGGAATTGT Gene GeneID:505918|ZNF627:XM_002688782:153_cdna Constitutive 0 NULL GeneID:505918 7 GENE ZNF627 NULL zinc finger protein 627 EMBV3_08684 AGATCCCAAGTTCCCTGAAGCACAGAACAACAGGAAGAAGTTCTAGAGATCATTTGGTCC Gene BVV0101_014359 + 1 EMBV3_04267 GK000006.2:59866461-59889489 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29838 GTGATGCAGAACTCATCCAGACATTCCTGCCCTTTGGAGCCGTTGTCTCTGCCAAAGTCT Gene GeneID:539205|BRUNOL6:XM_002690490:438_cdna UTR3_Alt 2 NULL GeneID:539205 10 GENE BRUNOL6 BRUNOL6 bruno-like 6, RNA binding protein (Drosophila) EMBV3_24319 TGTCCTACATCAAGGCCGTGGACATTTACCTCTGGGTCAGCTTCGTGTTCGTGTTCCTCT Gene GeneID:521180|GABRR1:XM_002690205:71_cdna Constitutive 0 NULL GeneID:521180 9 GENE GABRR1 NULL gamma-aminobutyric acid (GABA) receptor, rho 1 EMBV3_23124 GTGTGACATGAAATGGAGTTAGTTTGTCCTGATTGTGGGAGCCAGTGTTGTGGGGTGACC Gene GeneID:520750|CILP2:XM_002688517:81_cdna Constitutive 0 NULL GeneID:520750 7 GENE CILP2 NULL cartilage intermediate layer protein 2 EMBV3_20511 CCAGTAATTTTTAGGGAAGAAAATCTTCAGAGTTGATGATGCCGCCAGCTTGGTCCAGCT Variant GeneID:532044|MRPS22:NM_001046319:48_cdna 654^883 1 EMBV3_24090 GeneID:532044 1 GENE MRPS22 MGC134364 mitochondrial ribosomal protein S22 EMBV3_42493 GTGAAAGAGCAGCCAAAGCATGGAGACCCCATTCAGGCCACATGAAGTCATTGGGAAGCA Gene GeneID:507948|PTCH2:XM_002686431:410_cdna Constitutive 0 NULL GeneID:507948 3 GENE PTCH2 NULL patched homolog 2 (Drosophila) EMBV3_40541 CAAAAAGATGTGGAAATTAAAGCAGCTAGAGTGCCCCGAGTGTGATGTTCTCTCCCTGGG Gene GeneID:539918|MGAT2:XM_002690883:317_cdna Constitutive 0 NULL GeneID:539918 10 GENE MGAT2 NULL mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase EMBV3_14606 ATGGGCTCCCAGAGCTACACCACCAGAACCCTCCAGGACACACTAAATCCCAAATGGAAT Gene GeneID:521706|LOC521706:XM_002691466:326_cdna UTR3_Alt 2 NULL GeneID:521706 11 GENE LOC521706 NULL similar to Intersectin-2 (SH3 domain-containing protein 1B) (SH3P18) (SH3P18-like WASP-associated protein) EMBV3_27196 GGAGAGCCTGGTTGTGGCAAGAGCACCCAGGTTCTGCTGGGACAGGCTGCTTCTGCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30960 AAGGGAGCGTTACCAGCAGGGAAACGGTGGAGTAACTGAAAGGACCAGAATCCTGTCTGA Gene GeneID:531436|IFT57:NM_001105403:92_cdna Constitutive 0 NULL GeneID:531436 1 GENE IFT57 ESRRBL1 MGC179556 intraflagellar transport 57 homolog (Chlamydomonas) EMBV3_26181 GTATCTGCTGGCTCCTTGTCAGATTACCCAGAGGACCATGAGTACTGCTTCACACAGGCA Gene GeneID:100295754|LOC100295754:XM_002698007:120_cdna Constitutive 0 NULL GeneID:100295754 25 GENE LOC100295754 NULL similar to cytochrome c oxidase, subunit VIIa 2 EMBV3_38467 GGTGAAGCTCCTTGTGGTCCATCTGACTGGGTCATTTGACATCATCTCTGGACGCTTACT Gene GeneID:100297815|LOC100297815:XM_002689806:109_cdna Constitutive 0 NULL GeneID:100297815 8 GENE LOC100297815 NULL hypothetical protein LOC100297815 EMBV3_33657 ACTTGGTGGGTGCAGCCTGATGCTATGTGTGGCAGAGGTTCCCTTCCTCATCCCTTTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30702 CATCTCCCAGCTCATTCACCACCAGCGTGTCCACAAGGAAGAGAAGCCATTCATGTGCAA Gene GeneID:100139623|LOC100139623:XM_002699721:124_cdna Constitutive 0 NULL GeneID:100139623 X GENE LOC100139623 NULL similar to hCG1794302 EMBV3_40733 CTCTTCTTCTGGACCTTCGGTTTCTGGTCGAAAGATAAAGACTGCTGTTAGACGCAAGAA Gene GeneID:513270|NUP153:XM_002697577:431_cdna Constitutive 2 NULL GeneID:513270 23 GENE NUP153 NULL nucleoporin 153kDa EMBV3_00706 AAGCTGTACATGGTGCCCTGGCCGCTGGTGTTCTTTTCGTGTTTAGTGATGATTGCCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35077 GGATGACCTGCAGTACCCAGAGTATGGGTTCCTCTGATTCCCTAGTTCTAATCTCATGTC Gene GeneID:510678|POLE3:NM_001034390:17_cdna UTR3_Alt 1 NULL GeneID:510678 8 GENE POLE3 MGC127045 polymerase (DNA directed), epsilon 3 (p17 subunit) EMBV3_38736 CCCTGCACGTGAAGCAGGTTGTAGAAAGTGGCATTCTTGGGCAAGTAGGAAGACTTTATC Gene GeneID:511513|CDK12:XM_002695957:267_cdna UTR3_Alt 2 NULL GeneID:511513 19 GENE CDK12 CRKRS cyclin-dependent kinase 12 EMBV3_31139 GCCATCCATAGTTATACTGGTGGAGTCATATTCAAACTCAATCTGGACTCTAAAGCCCAC Gene BVV0102_242116 + 0 NULL GK000008.2:70066836-70094805 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225758 TCONS_00225762 TCONS_00225763 TCONS_00225759 TCONS_00225761 TCONS_00225766 TCONS_00225765 TCONS_00225760 1 XLOC_137837 Coding TCONS_00225760 XLOC_137837 Coding Coding POLR3D 8:70060509-70069825 j TSS168946 5006 1 TCONS_00225760_3 398 0.152017578905314 9 0.463553408480945 0.000678192745854941 0.00216888492007005 0.000961870778681943 0.000383966622632929 0.00114524736254136 0.000201248904371072 0.000419999272736796 0.000302492776949823 0.000666725615647442 7.4741020655143e-05 3.83595531238135e-14 4.93204549123376e-05 1.32746850598311e-05 0.000131427393025608 0.000301351201046248 0.000157462036606573 3.29026457745843e-17 1.68615630958265e-09 0.000489629705642882 0.000647345256566711 0.000215017885732873 2.47501466176537e-05 0.000617674508210096 7.77073821451017e-05 0.000934808352567054 0.000487199763431681 0.000617940985968005 7.94070577230437e-23 7.41130009387903e-28 3.74114200746214e-05 XM_005210241.1 POLR3D PREDICTED: Bos taurus polymerase (RNA) III (DNA directed) polypeptide D, 44kDa (POLR3D), transcript variant X2, mRNA. 0.0 3645 100.00 0.403515781062725 NM_001722.2 POLR3D Homo sapiens polymerase (RNA) III (DNA directed) polypeptide D, 44kDa (POLR3D), mRNA. 0.0 1862 82.79 0.365161805833 TCONS_00225760_3 sp|Q5E9Z7|RPC4_BOVIN RPC4_BOVIN DNA-directed RNA polymerase III subunit RPC4; 0.0 797 100.00 0.99748743718593 1 coding 0 0 0 0 -2.63542464133205 0.0128181374046396 -0.411151050915523 0.026048908531526 TCGCGACAAGATGGCGGCGCCCTGGCCCTGCCACGCAGACTTCCGCCCGGCGCCGAGACTCGGAACCCAGTGCGCGTCGCGTCGGAGGTGAAATCGGGACGCGCATGGTGTGGAACTACAGCCTGGGTGCGAAGGGGTGCGTCTTTGCCTCGTGCCTGGCCGGGGGCCTGGAGAGAAGGCATCATGTCGGAAGGAAACGCCGCGGGCGAGCCCAGCGCTCCGGGAGGGCCCCGACCCCTCCTTTCTGGGGCGCGGGGGCTTATTGGGCGAAGGCCGGCACCTCCCCTCACCCCGGGCCGCCTTCCCTCCATCCGCTCCAGGGACCTCACCCTCGGGGGAGTCAAGAAGAAAACCTTCACCCCAAATATCATCAGTCGGAAGATCAAGGAAGAGCCCAAGGAAGAAGTAACCGTCAAGAAAGAGAAGCGTGAAAGGGACAGAGACCGACAGCGAGACAGCCATGGACGGGGCCGGGGGCGCCCAGAAGTGATCCAGTCCCACTCCATCTTCGAGCAGGGCCCCGCCGAAATGATGAAGAAAAAGGGGAACTGGGATAAGACTGTGGATATGTCAGACGTGGGGCCCTCTCACATCATCAACATCAAAAAGGAGAAGAGGGAGACAGATGAAGAAACAAAACAGATCCTGCGCATGCTGGAGAAGGATGATTTCATCGATGACCCTGGGCTTAGGAATGATATTCGAAATATGCCTGTGCAACTGCCGCTGGCTCACTCGGGCTGGCTTTTTAAGGAAGAGAATGAGGAAACAGATGTTAAACCACGGCTGGCTGGCCCCAAGGAAGAGGATATGGAGGTGGACATGCCTGCTGTGAAAGTAAAAGAGGAGCCCCGAGATGAGGATGAGGAAGCCAAGATGAAGGCTCCTCTCAGAGCAGCCAGGAAGATCCCAGGCCTCCCGAAGGACGTGTCTGTGGCTGAGCTGCTCAGGGAGCTGAGCCTCACGCAGGAGGAAGAGCTGCTGTTCCTGCAGCTGCCAGACTCACTGCCCGGCCAGCCACCCACTCAGGACATCAAGCCCATCAAGACGGAGGTGCAGAGCGAGGACGGGCAGATGGTGGTAATAAAGCAAGAGAAAGACCGGGAAGCCAGGCTGGCAGAGAACACTTGCACCCTGGCTGACCTGACAGAGGGACAGGTTGGCAAGCTGCTCATCCGCAAGTCGGGGAAGGTGCAGCTCCTCCTCGGCAAGGTGACTCTGGACGTGACGATGGGGACCACTTGCTCTTTCCTGCAGGAGCTGGTGTCCGTGGGCCTTGGAGACAGCAGGACAGGCGACATGACAGTCCTGGGACACATAAAGCACAAACTTGTCTGTTCTCCCAACTTCGAATCCCTGCTGGATCACAGACACCGGTAAAGCGAGCAGATGGAGGACGGTGGTGACTGTGCCCACGACTGCTGCCTGCTCCAGACGTTTTGTTCTCAAATCTGTTCGACCCAGAAGGGGCCTGTTTAGCCCACCCACTCCAGCCATTGTCCCAGTTTTCCCCACAGGGCCCACACGTGGCTCCCTTCCACGGCGGCTGTGAACAGCACGATGACCTTCCCACAGTGAGGAAACCGCACACCCTCGCTGCTAGGGGGTTGGTCCCTGCTATTTATTTTTATATTTATGTCTTAGCTGTTCAGCGGACTGCACCCTCCCCAGGCGGAGAAGTGTCGGTCTGGGCAAGGACAGGCTCCTTCTCTGGGGATGTCTTGGTTCTCAGGGTAGGAGACGCTATTGCTCCCTCCTTCCTCCCAAGAGGCAGCGCTTGAGAGAGAACAGAGATGTCTGGAGTCTGAGACTCAACCTCAGTTCTGTCCATTACTAATTGTGTGACTGAACAAACTACCTAACCTTTCTGAGCCTCAGAGTCCTCATCTGACAAATCGAGGACGATACCTACCTCACAGGGTTGGCGTGAGGATGCTGTGGAATACTGTCGATGAAGTGTCCTTGCACAAGGCTGGACACACGCTGTAGGAGCTCAATAAATGTTAGTTTAGTTTTCCTTCGCCTGAGTGTTTTCAAACAATAGATTCCAAGGATCTCTCAGAAAAGGTGAATGGAACTGCTCCCCACATTCTTACTCCATGTCCCACCCCTCTGGACTGATGCTCTAACGGTTTGAGTTTGGGCCTCTCTGTGCCCTTTTTTCTCCTAAGCATCTTAGGCAAGCACTTCCTGTTCATTGCTGTGAGCCCCTAGCCATAGGTGCCATCAGAAGAGAGGAAAGCAAAGACTTAACTCCTCCCAGCCCTACAGGTGCCTTTGGGTGTCACGGTGGTCCCAGGACTCATTCCTCCCACCCTCACCTCTTCCAGCTCCACTTAAATTATTTCTCAGAAGAAACCTGTGACTGCTCATAGATAATTATCACCCCACCAACTCAAATACTGCTGAAAAACAGCCCTGGGTGAAAAAGAAAGTGTAGATGATTGAATAATGACCTCATCAACACTTGACGGATGACCTCTCACTTCAAAAGCTTTAAGTTTGAGAAGCCTGCCTCTGTCTCCTGTCCCGGCATCAGCTTGGATCCCGCTCTCCCTGGCCGCACTGGCCTTGTAGTTCATTGTGTCGTCTTGTTCCTTTCAGCAGCTCAGCACTCTTGACCCATCCAGTGTGTGGTCCCTGAGGAGCAGCGTCTCTTTGTTTATTCCTTGTCTGCAGAGCAGGATCATGGAGACACCTTGGAGGTTAGGGAAAGCCGCCTGCTGCAGTGTCTGTGGTCATTAGACACAGCATTGCAGCTCCCTTTGCTTCGAGCTTAGCAAACTGCCTCTGGAACAGTTGGGAACCACACAAGCTCCATGAGAAATGCTCCCTCCTGATATAGCTGGCCCTAGAGGTTTGGGAAGGATACTCCTTTCTTTAGTCTCCTTTCTGTTCTTGTGTTAGTTCCTGTGTTGTGTCTGACTCTTTGCAACACCATGGACTAAAGCCCAGACTCCTCTGTCCATGGAGTTCTCCAGGCAGGCATACTGGAGTGGGTTGCCATTCTCTTCTCCAAGGGATCTTCTTAACCCAGGGATTGAACCTAGGTCTGTCAGCATTGCAGGCAGATTCGTTTTCTGTCTGAGCCACCAGGGAAGCCCTTCTGTTCCTTGAGCCTGTTTTGAAATTCATCACTGCTGGGCTTTTCACTAAGCCCTTCAAGCTGCCTCACCAGCAGCTAGGAGGCGGGATTGTCTATGTAGTCCCCACATTGCCCCTTCTTAGGTAAGAGCTCATTGAGCTCTGCTAGATGGTGCTGTTCTGGTTTCTCTCGTCACTGTAGAGGGCAGCTGAGCAGAAAGGGTCTTGAAGACGTGTGCCATGGAAGTCCTATTTGGTCTAAGACAGTTTTGATGAACCAGCTGCTTTTTTGTTCTCTGAGCTTTAATGTTTGCTCCTTTTCTACAGCTAATGCCTTGCCAGTAAGTCTCCATTGTAATCCTTTCTCTTGGTTTCGCGGGGCCATGCTGTGGCGTGTGGAAATCTTAGGTCTGTGACCAGGGATCCAGCCTGTGCCCCCTTCAGTGGAAGCATGGAGTATTAACTGCAGGACCACTAGGGAGGTGGTCCCTCTCTGGGTTTGTTTGGTTCAAGAACTCTTCTGCTTTTCTGGGCTAACTCAAAAGTCCCTGCCTCAATAGACATTTGATGTTTCACAGCCTTTAATTCTCTGATTATTCCACAAAAACTTGAGGAAGAGCTTGTATTACTTTATAGCTCACTGTTGTGCCATTTCATGTGTATTGGGGATTGAACATTATGACCCTGAATCAGAGTCCCCATAGCCTGTCTTATATTCCTGATATACAGGTTGGACAGTAGAAGTGTGGGGAGAAGACAGGACACATCTGCTTTCTTGGACAAGCCTCCAAAGCATACATTTGTACTGACAAATAAATACAAGTAACAGGAGTAAAAAGCCCAAAGCCAGGTTCACGTATGAGTGAAAATGATGAAAATTTATTACAACCCGTGTATGTATGTTAAGACACGGAAAGTAAACTATAGGCTTGTTCGTTTCTTAACTATGTAAGTGACAGAATGTGGGCTTTAGAGTCCAGATTGAGTTTGAATATAACTCCACCGGTATAACTATGGATGGCTTTAGAGTCTGGATTGAGTTTGAATATAACTCCACCAGTATAACTTTGGAGGAAAATTACTTAAGTTCCCTAAGCTCAGTTTTACTCATTTTCTAAAAAATTGAGAGAATAGTACTTTTAAAAATAAAGTTTCTTTTAAATTACAATGGACACAAAGTTTTTCTTATGCAAGACAAAAGAGTGCTGCTATCAGTATGGGATCAGCACAAGTAGCAGAAAACTAGACTGACGGTGATGTAAGCAATGGGATGTTTAATTATCTCATGTAGCCAGCAGTCTGGAGATAAGATGGTTCCAGGGTCGGGTGGCAGCCAAAGCTTGCCAAAGCCAAGATTTTCTAGGATGCGTGTGTTCCACCATCTTTGGCGTTCTAAAGTGGCTAGAACAACTCAGCATCATTTCTTAAAATGAGAGTGTTCAGAGCCAAAGCAGGAAGCAAAGTACATAGCAGTAAAGGAACTTTCTCCTCATTCTGCTTATGTCAGGGAGGAATATGCTTCAGAGGCCCAAAGAGCTTTGGCCTTGTGTGTCTGATACAGCAGACCACATAGCCACCCTTGGCTGGGCACTGGCAAAAAAGGATGGGTGGACCCGTTTGTCCCTTAGCACTAATGCCTTGTTGCCTGTGAGGCAGGGTTTTGTTAGGAGGGAGGAAACAGGAAAGGCAGGTATAGATGGTTCATGATAAGTACCACCATGATAAAAAAAATGCTGTCTATTGTTAAATCATGAAGTCTATCTAGGTAGAATTTTTTTACTGTTCAGTTATCTTTTACTCTAAATACCAGTTTTAAAAATAACCAGTTTTAACATTTTAGCGCATATTCTTTCAGACTACAAAATTGTGTGTTACATATATAAACATGCTGTTTTATTACTGATTTCATCTCACTCAAATAC EMBV3_33477 GCTCAGGTGACTTTCGCAATCCTCCCAACTTCAACTAGCTGTTCTTTCTTAGGCGATGGT Gene BVT0102_411991 + 0 NULL GK000009.2:10731013-10768280 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08654 GTGCCAGCACACCAACGAGCCACTGTTCAAGCTATATATGTCAAAAACAATGTTCTTTTG Variant GeneID:100135054|GTF3A:NM_001113572:2_cdna 594^667 1 EMBV3_16788 GeneID:100135054 12 GENE GTF3A NULL general transcription factor IIIA EMBV3_24074 ACTTATGTACAGATTGCCCTACTCCAAGTCAGTGTGTGGTGGCCCGAACCTTAGGCAAAC Gene GeneID:537833|PIWIL1:XM_002694459:71_cdna Constitutive 0 NULL GeneID:537833 17 GENE PIWIL1 NULL piwi-like 1 (Drosophila) EMBV3_32304 GTGGATAGTGGGTATAAGAAGGGTGCAGTGCCTTTCCCATTAATTCCTGGTGGAGTCGTC Gene GeneID:539640|RCAN1:NM_001034679:49_cdna UTR3_Alt 2 NULL GeneID:539640 1 GENE RCAN1 DSCR1 MGC128596 regulator of calcineurin 1 EMBV3_21828 CACCAAGATGGAAAAGTGAGCAGCCAGATGCCTGAGTATCCCTAGCCCATCACTGTCTCT Gene GeneID:100297336|LOC100297336:XM_002698648:90_cdna Constitutive 0 NULL GeneID:100297336 27 GENE LOC100297336 NULL hypothetical protein LOC100297336 EMBV3_19950 TGGTAGATGTTGCACTCAAACAGGCTGCAGAGATGGAGCTTCAGGCAAAACTTATGGCTT Gene GeneID:510050|TGIF1:NM_001128499:77_cdna Constitutive 0 NULL GeneID:510050 24 GENE TGIF1 NULL TGFB-induced factor homeobox 1 EMBV3_33811 CTGATGCTAAGAGCACTCCGACGGCGGAAGCTGAAGAAGCAGGCATTGGCGACACGTCCA Variant GeneID:281296|MAPT:NM_174106:179_cdna 208^294 4 EMBV3_19839 GeneID:281296 19 GENE MAPT MGC134287 tau microtubule-associated protein tau EMBV3_07444 TGAATCACATATCCCAACTGTCGGAGGAGCAGGTGCTAGAGGTAGTGCGAGCCAACTATG Gene GeneID:100336729|LOC100336729:XM_002698448:445_cdna UTR3_Alt 2 NULL GeneID:100336729 26 GENE LOC100336729 NULL CG8379-like EMBV3_25902 CCTGAGGCTAGGGCAGATCCAGCATCCACTAAGAAGAGGAAAAAGCAGGGCCAAAAAAGC Gene GeneID:617937|CD3EAP:NM_001076485:427_cdna Constitutive 0 NULL GeneID:617937 18 GENE CD3EAP MGC139726 CD3e molecule, epsilon associated protein EMBV3_22976 TCCCTAAATTTCAGTGTTTATTTTTCTTACTCCTCCAGCCCTGACTCTGCCCCTAGACTT Gene BVT0102_142127 + 0 NULL GK000015.2:79239892-79260538 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060209 1 XLOC_036605 Coding TCONS_00060209 XLOC_036605 NonCoding Coding LOC510902 15:79195501-79243456 o TSS45030 1230 2 TCONS_00060209_2 91 0.478048780487805 2 0.974392125787213 0.000247066841834879 0.000620424062031422 0.000282368561706357 0.000610100149717756 6.75421740097244e-05 0.000262582781532726 0.000173479856804932 0.000413379594949338 0.000414932074403017 3.97645233155364e-05 2.11194546409636e-06 8.41571706488421e-05 1.11941915035845e-05 3.19837068483602e-05 6.3002230838646e-05 0.000153000390544551 0.000148475782653541 0.00208650870700192 0.000177269902478854 0.000146787488203573 1.08543620944022e-05 0.000244757476440847 0.000173435457895222 2.79179317635782e-05 0.000370715590226984 0.000439636397696313 0.000624887338600509 0 2.07400373390997e-290 7.82080908130851e-05 XM_005205829.1 LOC512867 PREDICTED: Bos taurus GTPase, IMAP family member 1-like (LOC512867), transcript variant X1, mRNA. 3e-47 194 68.74 0.416260162601626 0 noncoding 0 0 0 0 -0.518151837921972 0.0391450697288257 NA NA AACTGATTACCTAGCCTCCAGAGCGAAGCCTGCCGCCATGTCCTGTTGTGTCTGCTGCACATAGTAATGAGTTGCTCCAGGACCTTGCTTCAGACATGCGGGTTCTTTACCACCAGCACCACCTGGGAAGTGCAGCTGCAAGACCTCACACCCCAGCAAGGTCCCAGACCAGGGAGGAGACTGCCATCAAACCTGGGAGGAGCCCGGTGTTCTCAGGGCTCCTGCTTCACCTCCTTGGGCCAGAGTCCACCTCCAACAGGGCGGTGACGGCCACTGCACACAGGGGAAGCTCTGCCTCCAAGCCACGGGGCACACAGACTGCACAGAGCTGCTTCCTCAAAAGGACATGCTTTCACGACTGGCATAGGTGACAGCTTCACTTAATTTCAAAGAGAAAGGTAAACAAAATGAGAAGACAAAGGGACAGGTTTCACATGAAAGAACAAGAAAATAAACCATGAAAAAATCTGAGTGAAACAGAGAAATAACTTGCCTGATAAAGAGTTTGAATCAATCGTAACTGAACTTGGGAAAAGAACAGTTGAACACAGTGGGAATTTTAACAAAGATTAAGGAAGTATAAAAACCAATCAGAGCTGAAGAATACAATAAATGAAGTGAAAACTACACTAAAGGGAATTAACAGCAGATTAGATGGTTCAGAAGAATATATAAGCGATCTGGTAGATAGAATAATAGAAAACACTCAACCAGAACAGCAAAAAGACAGATTTAGAAAAACGAGAATAATTTTCGGAACTCTGTGACAACATCAAGCATACCAACATTCGCATTTTAGGAGTCCCAGGATAAAAGAGAGAGAAAAATGTATTCAATACTTTGAATTCCCACAGCACTTAGCTAGAATCTTTTCAAGTCTTTGCTCCCTAAATTTCAGTGTTTATTTTTCTTACTCCTCCAGCCCTGACTCTGCCCCTAGACTTTAACTCTTGGGTATATGGCATGAATCTTACTCATTTTTATACCTTGCTCTTAATGATATCTAGTAAACCGTAATAAATATATGGTCTATTAAATTTCCAGAAGTCAGTAGTGCTTCAGATTGTAAGTGGACAGTGGTTGTTACATCTGTATCTTCGCCTCAACTATCTAATTAATAAACTGATATTATACTGCTTGAGACCAAATCAATAATCACTGCTTAATTTTTTCTGAGAATAACATACATTGGCTGGAGAATCCAAAGGACAGGATCCTGGCAGGCTACAG TCONS_00060208 s 5' 0 TCONS_00060208 s 5' 0 EMBV3_24700 AAGCTTTTGCTACTTGTTCCTCCCACCTGGCTGTGGTGGGGTTTTTCTATGGCACCATCA Gene GeneID:518816|LOC518816:XM_002683644:2_cdna Constitutive 0 NULL GeneID:518816 7 GENE LOC518816 NULL similar to olfactory receptor Olr1455 EMBV3_39801 ATTTCTGTTTGAAATTCACCATTTTTAGCCTGCCCTGTCCCTCCAGGCATCACCCACAGC Gene BVV0102_358731 - 1 EMBV3_08374 GK000011.2:48905319-48954368 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09056 AAAGGCCTGAGTACTGACCTAAGAAGCAGTTGTATGAATTCTCTGGGGGGAAGGGAGGAG Gene GeneID:506322|NRAS:NM_001097989:26_cdna UTR3_Alt 2 NULL GeneID:506322 3 GENE NRAS MGC148418 neuroblastoma RAS viral (v-ras) oncogene homolog EMBV3_27878 CAAGTGCTCCTGACCTGCTGCCCTCCAGGGTAGCCACCGAGGAACAGGGCTACTGAAAAA Gene GeneID:281557|TXN2:NM_174208:161_cdna Constitutive 5 NULL GeneID:281557 5 GENE TXN2 MGC137598 thioredoxin 2 EMBV3_12125 TGTGGAAAGGTGTGGCATGTGCGAGCGTTTATAGTTGTTGTCGCTCAGTTGTCTCCACTC Gene BVV0101_024315 + 1 EMBV3_42202 GK000014.2:66434636-66447886 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43759 CCTTTGAAATAAGAGGAACTCTTTTACCAGGGTAAAGCTGACATTAGAGGGTCTGGAGGA Variant GeneID:518469|GPCPD1:XM_002692364:238_cdna 242^665 2 EMBV3_17258 GeneID:518469 13 GENE GPCPD1 NULL glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) EMBV3_20721 AGGGTGTCATTATCTCTCTTGGATGTGGGTGGAGGCAGAGATGTAAGGTGGCTTGTCTAG Gene GeneID:281157|FDX1:NM_181011:2_cdna Constitutive 0 NULL GeneID:281157 15 GENE FDX1 MGC134346 ferredoxin 1 EMBV3_02780 CTGAGATAACTATTTCTAGACTGACACTGATGCTGAACTTCCAGAATGCACCCTATACAT Gene BVT0102_106285 + 0 NULL GK000009.2:57276856-57504329 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09963 CCAATGCTGATTTGGATGACTGTACTTGGCATGAAAGCAAGGTTCGCAAAGGCCTCCGTG Gene GeneID:521171|LOC521171:XM_002695048:380_cdna Constitutive 0 NULL GeneID:521171 18 GENE LOC521171 NULL similar to FLJ16165 protein EMBV3_42980 TTTTTGTCTTTGAATTTGATCCATATGTGCATGTGGCTTCATGTAGAAATCAAGAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_01223 TGGAGGATCTGGAGGCTCTGAAAGTGGCAGGGTGAAATACAACCTGAACGCCCTCTCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31985 AGCTGTTCTCAAGCTGTCATGAGATGGTTCTTTCTTGGCCCTGGCTGTCCTCGAAAGCCT Gene GeneID:505079|COPS7A:NM_001105331:15_cdna Constitutive 0 NULL GeneID:505079 5 GENE COPS7A NULL COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) EMBV3_19935 TCATCCTAGGCATGGGCTACAAAGAAAACGCCAGTCAGGCAAGGGATTTGTTATCCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15870 CATCCACCTGGTTTACGTTCCTTCAGGGACAAAGCAGTTTGGAAGATTAACGGCCACGAC Gene GeneID:787025|LOC787025:XM_002690583:19_cdna Constitutive 0 NULL GeneID:787025 10 GENE LOC787025 NULL similar to TCRA protein EMBV3_40933 GCCTTCCTAGCAGTAGGACTACTGTGCAGCTACCTCAGACACAATTGGGTAGTTGAGACT Gene GeneID:408016|CASP3:NM_001077840:13_cdna Constitutive 2 NULL GeneID:408016 27 GENE CASP3 NULL caspase 3, apoptosis-related cysteine peptidase EMBV3_12002 TCCTTGTCTGCCCCCTCTTAAGCCTGCCTTGGACCATAACTTCTTCCATCTGAGTGAATC Gene GeneID:784765|GAPT:NM_001099397:30_cdna Constitutive 0 NULL GeneID:784765 20 GENE GAPT NULL GRB2-binding adaptor protein, transmembrane EMBV3_35936 CAGTGCTGGGGGCTTTTACCTAAACTCATTTCACCCTCACCCCTCACAAGAAGTTGTTTG Gene BVT0102_389325 - 0 NULL GK000024.2:46323391-46371949 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27322 CGCCTCCAACCTGAGGTATACAATTGTGGAGGATAAAACAGCTGACATCTGACTCCAAAC Gene BVT0102_298602 - 0 NULL GK000011.2:63425655-63429722 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025151 TCONS_00025165 TCONS_00028077 TCONS_00025163 TCONS_00025152 TCONS_00025164 TCONS_00028076 TCONS_00025160 TCONS_00028079 TCONS_00025161 TCONS_00025154 TCONS_00025162 TCONS_00028078 2 XLOC_014685 XLOC_015398 Coding TCONS_00028078 XLOC_015398 Coding Coding RAB1A 11:63425639-63458791 j TSS19762 5733 1 TCONS_00028078_3 205 6 0.827245030315828 0.00480052082096301 0.00194962206049145 0.00467646810084406 0.00700123152273688 0.00644746540076949 0.00278885392899816 0.00692584905782049 0.0092195630504374 0.0105830734512008 0.00133627842290156 0.000492654947545786 0.000195718528553706 0.00187428043654547 0.00321884713474776 0.00212393701993355 0.0123038156534452 0.00686212851690638 0.00526265490104916 0.000921688043064836 0.0113834003355618 0.0041137109626174 0.00195058306885246 0.00363088021836448 0.0038287966440987 0.00341074985273522 0.00269354652657422 0.00460821614669126 0.000537156388324783 0.000481267151126436 0.000907856171010084 XM_002691446.3 CEP68 PREDICTED: Bos taurus centrosomal protein 68kDa (CEP68), transcript 0.0 6594 100.00 0.637537066108495 NM_004161.4 RAB1A Homo sapiens RAB1A, member RAS oncogene family (RAB1A), transcript 0.0 3606 90.42 0.457701029129601 TCONS_00028078_3 sp|P62820|RAB1A_HUMAN RAB1A_HUMAN Ras-related protein Rab-1A; 3e-152 425 100.00 0.995121951219512 6 coding 0 0 0 0 -1.70812536359129 0.072103459974009 0.0128184011380737 0.828493154853835 GGGGGGAATGGGGCGAGCGACAGCCCCTCAAGTACGCGTGCGCCAGAAGCGCGGGGCTTGGTGGGAAGCTGAGTCCAGGTCTTGGCCCTGTACCGTGGTTCCCCAGGGCCCGCAGCCGCGCTCGCAACTCTCTTTCCCGGCATGCCATGCGGTGCGGCCGCCCTTTGGGCTGTGTAAAGGCCCCTCGGTCTAAGGCTTTCCTATTTCCTGGTTCGCCGGCGGCCATTTTGGGTGGAAGCGATAGCTGAGTGGTGGCGGCTGCTGATTGTGTTCTAAGGGGACGGAGTGGGGTAAAGACGTTTGCTCTCCTGGAACAGCCTATCTCATTCCTCTCCTTCGACTACCCGTGGCGCGGAGAGTCAGGGCGGCGGCTGCAGCAGCAAGGGCGGCGGTGGCGGCGGCGGCAGCTGCAGTGACATGTCCAGCATGAATCCCGAATATGATTATTTATTCAAGTTACTTCTGATTGGCGACTCTGGGGTTGGAAAGTCTTGCCTTCTTCTTAGGTTTGCAGATGATACATATACAGAAAGCTACATCAGCACAATTGGTGTGGATTTCAAAATAAGAACTATAGAGTTAGATGGGAAAACAATCAAACTTCAAATATGGGACACAGCGGGCCAAGAAAGATTTCGAACAATCACCTCCAGTTATTACAGAGGAGCCCATGGCATCATAGTTGTGTATGATGTGACAGATCAGGAGTCCTTCAATAATGTTAAACAGTGGCTGCAGGAAATAGATCGTTATGCCAGTGAAAATGTCAACAAGTTGTTGGTAGGGAACAAATGTGATCTGACCACAAAGAAAGTAGTAGACTACACAACAGCAAAGGAATTTGCTGATTCCCTTGGAATTCCATTTTTGGAAACCAGTGCTAAGAATGCAACGAATGTAGAACAGTCTTTCATGACGATGGCAGCTGAGATTAAAAAGCGAATGGGTCCTGGAGCAACAGCTGGTGGTGCCGAGAAGTCCAATGTTAAAATTCAGAGCACTCCGGTCAAGCAGTCAGGTGGAGGTTGCTGCTAAAATTTGCCTCCACCCTTTTCTCACAGCAATGAATTTGCAATCTGAACCCAAGTGAAAAAAACAAAATTGCCTGAATTGTACTGTATGTAGCTGCACTACAACAGATTCTTACCGTCTCCACAAAGGTCAGAGATTGTAAATGGTCAATACTGACTTTTTTTTTATTCCCTTGACTCAAGACAGCTAACTTCATTTTCAGAACTGTTTTAAACCTTTGTGTGCTGGTTTATAAAATAATGTGTGTAATCTTTGTTGCTTTCCTGATACCAGACTGTTTCCGTGGTTGGTTAGAATATATTTTGTTTTGATGTTTATATTGGCATGTTTAGATGTCAGGTTTAGTCTTCTGAAGATGAAGTTCAGCCATTTTGTATCAAACAGCACAACCAGTGTCTGTCACTTTCCATGCATAAAGTTTAGTGAGATGTTATATGTAAGATCTGATTTGCTAGTTCTTCCTTGTAGAGTTATAAACGGAAAGATTACACTATCTGATTAATAGTTTCTTCATACTCTGCATATAATTTGTGGCTGCAGAATATTGTAATTTGTTGCACACTATGTAACAAAACAACTGAAGATATGTTTAATAAATATTGTACTTATTGGAAGTAATATCAAACTGTATGGTGATAAGTATTGTTTTAATTCTTATGGCTAAAGGGAAATAGAGCCTTGCATTATACTCAAAACAGCCATTTGTGTGTGCAACCAGGGCATTGTAGACAACTATCTTAGAGCAGCATCCAATATACTTTCCAGATAATATACCCAGTAAATGACCTAGGGAGGCTTATGTGCTGCACAGGGATTTAACCAAGCTTAGTGGTTCAGGGAGATTAAATTTTATGAAAGTAAGTTTTAGAATGTATGCTACCTAGCCTATTATCTCTGATCTTTCTCTAGAACCATTTGAAATGGCTTCACTGATCAACATTTGATTCTTCTGTGGTAGAGGTGGAAAACACCACCTTTCCTTAATTGGCAGACTAACACGTGTGCTAATATTGTTTCTTCCATGTTTGGAGTCAGATGTCAGCTGTTTTATCCTCCACAATTGTATACCTTAGGTTGGAGGCGAGTTAAAGCATTAAAGTAGGAAGCAGGAAATTTACTATTTGCCCTAATTTTAGAAAATATGTCCCTTAAAATTAGCTGAAAACCTGAATGCTGGGTGGGAGTAATAAATAAGAGAAATATTTATTTCAGTTGAATTTTGCACATGTGAAAATTTTGTTAACTAGGACCTTAAAGGTCCTAGGGTTTGTTTTTATTGTGGGGGAACAAAAATCTTTTGCTAACTCTGGCATTTTAAGGTGATAGAAGTCAAAGATAGTTTCCTTCGGGTTGAAATAGTAACCAAAATATTCTTTACTTAGGGGCGTGGGATGTGGCTGTTGGCTACACATTTTATGGTGGGGTCTTTAATTCAGTGATAAAATTTAAACTAAAAACAAGCCAAAAATTATAGGTTTCTTTATTTTCACTAAACAGGCAACTGAAATACATGGTACAAAAATAAGTGGTAAGATTATTGTAAAATGAATGGACAGAATAAATATTCAATTTAATTTTCCATCTATGAGAATTTCACAATAAAATCACAGTTTACTTTGTATTATAGATGTGCTTGTTGGGTCTATTCATCTTCACATAAGGCAACTGAAAAACTCCTCAAGCTACCAATAGTTATTTGGGTGAAATTTTTTTAGTGCTTCAAAAGGTTTATTTTTTTGCCTTATCAATACAGTACAAATAATTCAGAAACATTTTTAAAGTAGATGATACAAATTTCAGACAATGTAATGCACTTTTGTTTTATACAACAAGTTGTTCAAACTGTCAGCTTTTTCTTGGTGAGTTAGCAAAAAAATTATGTGAATTTGAGGTGTAAGCATATTTACATATTTATTTTTGAAAATTCTAGTGTTCTTTTCCTTGTGGTAGTCAAGACTGGGACAAGATGTTTCAGCACGCTTCACTACTTGCTTAATGAATGCAGTTTGGGGGATACTCCATTCCTACCCCCACTTTCAAGTACAAATATTTCAAGCTACATTATGGGCTTTTAATAAATCCATTCACACTCAGTAAAGGGAATTATTGCTTGCCGTATTTTGTAAGGTTGCTATGAATTAGCTCACATGTTCTAAACCTAAGCAGTCACAGTCTCTGGAAATCCTTGCAAAATGATAAGCCATTCTGGTCTAAGCAATGACGTTTTATGACTTTGGACCAAAATTTCCTTTAGCATGTATGTTGTCATTGCAGCATATTTTACATCTGCCCTTCTTTGTGTTCCCATTTAAGCTTCAAAATATCATTGTATTGACATTGTCTATTGGCAGATGAGCTTAAGCCATGGAGCTGCAACAAGAACCCAGGTTTTGAAACTGCCAATCTAGCTCCCAGTACTGCCACTTGCCTGGGGACTTAAGTTCTACTACTTTAAGGGACTACTAGGAAATTATACCACAGGTAAACTTGGGGTTTTGTAACCACATGATGTGTCACTGTGAGCCACTGCTGTCCTTAAGGCTAATGCTAGAATCAAACCTGGCCGTGTCTGCTCATGAAATGCTGCTGGCAGCATCTAGTCAGAAACAATTTCCACTTGAGTTTTAAGGGAGGTCTTAAACCTATAGCACTGCCGAAGATACCATTAATAGCTGTGCTGATGCTCTTCAGTGATATTTATGAGTAGGTCCAGAGTAGGCAAAGGAAGTGAACAAAAATATCTTTAGATCATCGCCTGGTAAAGTAATAGTTTTTTACAAAATAGGGCACTCTGAAATAAAATATTCTGTGAAAATTTCTGTCAGCTGAAGCCTATTATTAGATCGAATGGCACTTTTAGCTTTCAACTACTGTAAAATACCATTGGTCACTTTGAAGATGACAATCCTATAGAAACAATTTTTTTGCTAACTAGTTAAGGCATTTTCATGCCTAGCAAAATGTCAGTAAATGGGTTTAACTCCCAAGGGCTTATCCTGTAACACACTCATTGGAAAGGCATGTACCAATTTATAGTCACATCAAAGAGAAGGTGAAATATATCAGTTTAAGTACAGAGGCTATAAGATATGCCTTCTGAACCAATTAAGGCCTTTAAGACTATTTTACATATATAATAATCTGCTAGGAAGGTGTTCTGTCTTTTTAAATCTATGTACAGAACCAAGATTAAAACTGAGACAGCAGAATCAAAATTATGCCTTTAAGCATTTTGATAAATACTAGAATGGCAGAGGCACTTGAAATACTCCATTTTATATAACTGTTACTGAATTTTATAGTTTCCCTTTAGAATTAAAATCTTTAAACATTAAAACTTATTAACAGCTTATTTTCCAGTTTAAACTCTTGAGGATTTTAGTTCACAGAGATGGATGAGATGGTGTTAAGTTGCTCAGCTTTAAGTTCTAAACTTCTCTTAAAGAGGGTAATTTTCTATTTATTTTATTCTGAGGGGTATCAGAAGACTGCTTTATGAGAGTAACTGTTCTAATGTTACCTGCTCTGGGTTCAGGTGATTTGTCCATTTCTTTATAAATCAAAGTATCTTCCTTTCTTAAGCACCCTCCCTCAAGTGAGAACCTAGAGTTTGAGAAAGGATTTTGACTTTCTTGAAGTGTTATCACATATTTAAGTGTGGAGGACCCTTTCCTCAGGTCATAGCCTACTGGAACACAAGTAAACAGGCAAAGTGCTTTCCTCCTTCCATGCACATTCACAGCCAATAAAACATTTTGAAAGCGCTGCTTTGTTTTTGCAGAATGTGTGGTTACCAGCAATGGCCAATCATTTTACTTTAAAAAGCTAGAGTTGGCTTTAAATGGTTGCTCCTTGGTCCCTCCCCCCCCCCCCCACTAAGGTATTCACATGTCAACTCCCAAAGAAACAAAAGAATTCCCTTTTCCCCTCACCATGAACAGCCTTAGCTTCTACAGCTATTTAACCAGGCTGTGTGAGCCTATCCATGCCCTTCTGACTCTTCCCAGGGAGGAGTGCAGGATGCCGCCTCCTGGAGGTACCCTGAAGGCAGATCATTAGTGGGCTGAAGCTCAATGGCAGCTTCTTAAGCCCCTCTCATTCTCCTTTAAAATGTTAGGCAGGCAGATGGAGCCCTGAGCACTTAAGATGATAAAAGGTATCTTTGCAGCCCAAAATAATTTACAGAAGTTCTATTTGTTCAAAACTTTCTATTAATTTGGAGAGTCTGAATATCTTCTACAGTCTTCAGAGAGTGATTTATAAGCCTAGTCACTTTTTGTCTTTTGGATCCTCTTGTATGCCTGAGAACACCAAGTACTGGGTACCTTCTTTCTCCTACCAGCTTTCTTTAAATGATCTCAGTACACAGAGTAGTTTAGGAGTTCTGTCTCCTCTTTTTAACTGGACGGAGGGAGAGGAAATCTTGTAAGCCTTGTCTGCATTATTTGAACAACTGCAAAGCTACATGCTCTTTGTAGAGAAGCACCAAAGGAAAACCTTAACTGGAAAGGATTCATTTAAATAAAAACAGTAACTCAACAGCCCTTACTTTCAGGGAAAAGAAAGGCATTTTAAAGCTAGTACATTAGAGTCACATTTCCCACTTGGTTTCAGAATTAAATGGCTCTCACAAGGACTTCCGAAAGTTTCCAAATAGCCACATTTTGACTGACAGATAATTACATCTCATTCAGAGAAGAT EMBV3_25573 CTGAGGGTCAGCCTTTGGCTCCTTTTTCCTGAGACAGTGGAAACAATGCCAGCTCTGTGG Gene GeneID:327696|SDHC:NM_175814:206_cdna Constitutive 0 NULL GeneID:327696 3 GENE SDHC NULL succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa EMBV3_26574 TTTGAGTTTTTCATGTCTCCTTGCCGGACTTGCCCTGGTCCCGCTGGAGCGGAGCTGATG Gene GeneID:616055|CHADL:NM_001110089:207_cdna Constitutive 2 NULL GeneID:616055 5 GENE CHADL MGC179327 RANGAP1 chondroadherin-like EMBV3_03987 GACTTTTGGAGCTGCACTGAAACATCTGTAATAGTTAAACCAACCTGGTTTTCTTTTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12305 GAGGACGCAGATCACAATCAAGCTACAGAAAGCTGTGAGAAAGTGAAGGATGTTGGAAGC Gene BVV0102_048861 + 0 NULL GK000007.2:24114860-24318562 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212601 TCONS_00212603 1 XLOC_130220 Coding TCONS_00212601 XLOC_130220 Coding Coding RAPGEF6 7:24071500-24289474 j TSS159486 4617 1 TCONS_00212601_7 1410 25 0.97893317062205 0.000664376939356406 0.000188571384921867 0.000130028713031867 0.000142963937619048 0.00027098006945722 0.000371681106749764 0.000100332561694365 0.000142836609496656 0.000107277710212707 8.71809386112972e-05 3.56287352658227e-05 1.25147527944238e-05 0.000112360423806744 1.15860776303545e-05 7.91477747736872e-05 6.47644536371896e-05 0.00251251231439405 3.62686764510099e-05 0.00031610317628423 0.000590774440187646 0.00036121371621559 0.000106956325851915 9.03615569985233e-05 7.50100046963854e-06 0.000244860749481351 0.000180749080909864 0.000213444000822 0.00010606995966805 3.53119064394321e-116 5.95103598761259e-125 XM_005209081.1 RAPGEF6 PREDICTED: Bos taurus Rap guanine nucleotide exchange factor (GEF) 6 (RAPGEF6), transcript variant X10, mRNA. 0.0 8294 100.00 0.995884773662551 NM_001164389.1 RAPGEF6 Homo sapiens Rap guanine nucleotide exchange factor (GEF) 6 (RAPGEF6), transcript variant 5, mRNA. 0.0 6343 90.71 0.987654320987654 TCONS_00212601_7 sp|Q8TEU7|RPGF6_HUMAN RPGF6_HUMAN Rap guanine nucleotide exchange factor 6; 0.0 2427 95.20 0.885815602836879 5 coding 0 0 0 0 -0.169613752663823 0.24192062131103 0.0100212493660124 0.894555645182239 CATTAGCCTTCCCTCCGCCCCCGCGCGGGCTGCCCTCTGGCCAGTCGCGCGTGGGCTGAGGCCCTGGGCGGGCGTTGCGAAGGCTTGTTTGCCAAAGCGCGGTCCCCGCCGCAGTTCGGAGTTCCCTTCTTCAGGGGAGTTGCGAGGGGGAGGGTGTAGCCCCCCTACCTAGGGTAAATGGCCTGTCGCATGGGCTGCTAAGGGCAGGCTGGGGAGCACGGGGGCCGGGGCCGCGACCATGAACTCACCTGTGGATCCTGGCGCTAGGCAGGCGCTGAAGAAGAAGCCGCCAGAGCGGACGCCCGAGGACTTAAATACTATTTATTCTTATCTTCATGGAATGGAAATATTATCAAATCTCAGGGAACATCAGCTTCGATTGATGTCTGCAAGAGCACGCTATGAGAGATACAGTGGCAATCAAGTTCTTTTTTGTTCAGAAACTATTGCCAGATGTTGGTATATCCTGCTTTCTGGATCTGTGCTTATGAAAGACTCCATGGTTTTGCCTCCTTGCAGTTTTGGTAAGCAGTTTGGAGGAAAAAGAGGATGTGATTGTCTTGTATTAGAGCCTTCAGAAATGATTGTGGTAGAGAATTCCAAAGATAATGAAGATAATATTCTACAAAGAGAAATTCCTGCCAGACAGTCTCGAAGAAGATTTCGGAAAATTAATTGTAAAGGAGAACGCCAGACTATTACTGATGATGTGGATATTAACAGCTATCTTTCTCTTCCAGCCGATCTTACCAAGATGCACATTGCAGACAACCCTCATCCACAGGTGACTCACGTGTCTTCTAGTCAGTCTGGCTGTAGCATCGCCAGTGACTCTGGAAGCAGCAGTTTATCTGATATCTATCAGGCTACCGAAAGTGAGGTAGGAGATGTCGATTTAACACGTCTTCCAGAAGGACCTGTTGATTCTGAAGATGAAGAAGAGGAAGATGAAGACATTGATCGAACAGATCCTCTGCAAGGGCGGGATCTTGTCCGAGAATGTCTTGAAAAAGAACCTGCAGATAAAACTGATGATGACATTGAACAATTGCTGGAGTTTATGCACCAGCTTCCCGCTTTTGCAAATATGACCATGTCTGTAAGGAGAGAACTCTGCTCAGTGATGATTTTTGAAGTGGTAGAGCAGGCTGGAGCTGTCATTCTTGAAGATGGGCAAGAGCTTGATTCATGGTATGTTATTTTAAATGGCACTGTGGAAATCAGTCATCCAGATGGAAAAGTTGACAATCTCTTTATGGGAAATAGTTTTGGAATCACACCCACTCTGGATAAACAGTACATGCATGGAGTTGTTAGGACTAAAGTAGATGACTGTCAGTTTGTCTGCATAGCCCAGCAGGATTATTGGAGAATTTTAAACCATGTTGAAAAAAATACCCATAAAGTTGAGGAAGAGGGAGAAATTGTTATGGTACATGAGCATCGTGAACTGGATCGAAGTGGAACCAGGAAAGGACACATTGTAATTAAGGGAACACCTGAGCGTCTCATCATGCATTTAATAGAAGAGCATTCCATTGTGGACCCAACTTATATAGAAGATTTCCTATTAACTTACAGAACATTTCTTGCAAGTCCTTTGGATGTTGGGACCAAACTGTTGGAATGGTTTAAAATTGACAGCTTAAGGGATAAGGTAACACGGATTGTATTATTATGGGTAAATAATCATTTCAATGATTTTGAAGGTGATCCTGCTATGACTCAATTTCTAGAGGAATTTGAAAAAAATCTGGAAGATACAAAAATGAATGGTCATCTCCGGTTATTGAATATTGCGTGTGCTGCAAAGGCTAAGTGGAGACAGGTTGTGCTGCAGAAAGCTTCCCGGGAGTCACCTCTGCATTTCAGCCTAAGTGGAGGAAGTGAGAAGGGATTTGGTATTTTTGTTGAAAGCGTAGAACCTAGTAGCAAAGCTGCTGATGCAGGACTGAAACGTGGTGATCAAGTAATGGAAGTAAATGGACAAAATTTTGAGAATATAACGTTTGTGAAGGCCCTTGAAATTTTGAGGAATAATACTCATCTTGCACTTACTGTAAAGACCAACATTTTTGTGTTCAAAGAGTTACTTAGTAGGACTGAACAAGAGAAATCTGGTGTTCCTCATATTCCCAAAATTGCTGAAAAAAAAAGTAATCGCCACTCAATCCAGGATGTACCAGGAGATCTTGAACAGACATCACAGGAGAAAGGAAATAAGAAAATAAAAGCAAATACCGTTTCAGGTGGAAGAAACAAAATCAGGAAAATTTTGGATAAAACACGATTTAGTATCTTGCCTCCAAAACTTTTTAGTGATGGAGGCCTGAGCCAGTCACAGGATGACAGCATTGTGGGAACGAGACACTGCAGGCACAGTCTGGCCATCATGCCTATCCCTGGAACACTCTCGTCCAGCAGCCCCGACCTCCTCCAGCCTACCACCAGCATGTTGGATTTTTCTAATCCCTCAGATATTCCTGATCAAGTTATAAGAGTTTTCAAAGCAGATCAGCAAAGTTGCTACATTATCATCAGTAAAGACACTACAGCTAAGGAAGTTGTCTGTCAAGCTATTCATGAATTTGGTTTGACTGGTGCATCTGACACATACTCTCTCTGTGAAGTTTCTGTTACTCCTGAGGGTGTTATAAAACAGAGAAGACTTCCAGACCAATTCTCCAAATTAGCTGATAGAATTCAGCTCAATGGAAGGTATTATTTGAAAAATAACATGGAAACAGAAACCCTATGTTCAGATGAAGATGCTCAAGAACTAGTTAAGGAAAGCCAGCTGTCCATGCTACAACTAAGTACTATTGAGGTGGCCACTCAGCTGTCAATGAGGGACTTTGATTTATTTCGTAATATTGAGCCTACTGAATATATTGATGACCTTTTTAAGTTAGAGTCCAAAACAGGAAATACTCACTTGAAAGAATTTGAAGACATTGTAAACCAAGAGACATTCTGGGTTGCATCAGAGATTTTAACTGAATCAAATCAGCTCAAACGAATGAAGATTATTAAACATTTTATTAAAATTGCACTTCATTGTCGAGAATGTAAGAACTTCAATTCCATGTTTGCAATAATAAGTGGTTTGAACTTGGCATCTGTAGCACGACTCAGAGGTACTTGGGAAAAGTTACCAAGCAAGTATGATAAACACTTCCAAGATCTGCAAGACCTTTTTGATCCATCCAGAAACATGGCAAAATACAGAAATATTCTTAGTAGTCAAAGCATGCAGCCTCCAATTATTCCACTCTTTCCTGTTGTCAAGAAAGATATGACATTTCTACATGAAGGAAATGATTCCAAAGTTGATGGTTTGGTAAATTTCGAGAAACTCAGAATGATTGCCAAGGAAATTCGTCAGGTTGTTCGAATGACTTCTGCTAACATGGATCCAGCTATGATGTTCCGACAGAGGTCACTGAGTCAAGGCAGCACAAATTCAAACATGCTGGATGTTCAGGGAGGTGCTCACAAAAAAAGGGCACGCCGTAGCTCTCTGCTAAATGCCAAGAAGCTATATGAAGATGCCCAAATGGCAAGAAAAGTGAAGCAGTATCTTTCCAGTCTGGATGTCGAGACAGATGAAGAGAAGTTCCAGATGATGTCATTGCAATGGGAGCCTGCATATGGTACCTTGACCAAGAATTTAAATGAGAAAAAATCAATGAAGTCATCAGAAATGTCTCCGGTGCCACTGAGGTCAGCTGGCCAAACAACTAAAGCTCATTTGCATCAGCCTCACAGAGGAAGCCAGGTGCTTCAGGTGCCAGCTGTAAATTTGCACCCTATCAGGAAGAAGGGCCAAGGAAAAGACCCTGCCACCCTGAGTACAGGTTTACCTCAGAAAATTTTAGGAACAGCTGAAGAAGTAAGTGGTGGTAAGAAACACACAGAAGACACCGTTTCTGTGGCATCATCCTTACATTCCAGCCCTCCTGTGTCTCCTCAAGGTTCCCCCCGCAAAGTTGGCAGTATCCTATCTGATCACAGCATCCTGCTGCGCCTCTCAGGGTCTTCCTCATCCCCTCCCCGTGAGTCCAGCACCAACATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGTTTACTTGCAAAAGAAAATCCTTCAGATTACCAGGAGCACAGCCAAAAGAACAGACAGGACCGAGAAGGCCACTGAGGAGAATAGAGACAGGACAAGCTGTGACAACACAGCCAGAAAAAGAATGACATCCCCGTTTAGAAGATTTAGGGAAAGAACTCTTTCAAGGGAGAGACTAGCCAACAGCAAAAAAGAGGACGCAGATCACAATCAAGCTACAGAAAGCTGTGAGAAAGTGAAGGATGTTGGAAGCAACATCAAAGATGAGAAAGGGAGTGACATCTTCAATTCAAATAGCCGAGGCAACAGTAACACTTTACACTGCTTCTATACGCGATTCACGTCTAAAAGGAGAAAGACACTCTGATGAAGTTCTTTACTTAATTTTAGTGTGAAATTTGTTTTCATTTATTAATGTAAATGTAACTTAAATTAAGTCATTTGTCAAGGCTGAGGCAGCCAACTACTAAAATACTTTCTCTGAGCATTTTATGGATTAGTATCCTCCAGCAA EMBV3_27768 CCACATGCCAGCAACAGATGCAAGAGCTACTCCCTGCAAAGGACATTGAAGCTCTGTTTG Gene GeneID:514076|CFB:NM_001040526:111_cdna Constitutive 0 NULL GeneID:514076 23 GENE CFB BF MGC137125 complement factor B EMBV3_38970 CAGTCAACCATATAAAGCTATACCTTGACCTTGTCTGGCCAATGAGCCATCACTTGAACC Gene BVV0102_051458 - 0 NULL GK000014.2:73176008-74642805 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25206 ATTAAAGATGGTCCCAACTAAGACCCAGAAGCTGGACACCAGGGTAGGACTGGGTAGTGC Gene BVT0102_031994 - 1 EMBV3_29874 GK000019.2:43365354-43366277 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097099 TCONS_00097100 TCONS_00097098 TCONS_00097097 1 XLOC_058170 Coding TCONS_00097098 XLOC_058170 Coding Coding PLEKHH3 19:43365353-43374706 j TSS72033 2688 1 TCONS_00097098_1 506 8 0.713430282292558 0.00184875324901065 0.0011507169696608 0.000603226111980975 0.00133459398789894 0.00120783036626151 0.000144428810031619 0.000287342404053077 0.000629318375372996 0.0012063882440395 8.11257404755609e-05 1.36257279633235e-05 1.39849322745e-05 0.000113646554051499 2.05022218330808e-05 0.000118155941943939 9.93188388957677e-10 9.03330950788745e-08 0.000147735229940323 0.000985735485655708 0.00186235163179194 0.000898841618485344 7.07931043286017e-08 4.8937818754363e-08 0.000570929358309791 0.0012475366232468 0.00146254882042365 0.000651743102993486 5.36793675176303e-08 5.56600347908252e-05 3.31482336926901e-08 NM_001192826.1 PLEKHH3 Bos taurus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (PLEKHH3), mRNA. 0.0 2731 99.93 0.563988095238095 NM_024927.4 PLEKHH3 Homo sapiens pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (PLEKHH3), transcript variant 1, mRNA. 0.0 2224 92.39 0.563616071428571 TCONS_00097098_1 sp|Q7Z736|PKHH3_HUMAN PKHH3_HUMAN Pleckstrin homology domain-containing family H member 3; 0.0 665 94.27 0.857707509881423 1 coding 1 0 1 1 -0.103582118871431 0.376497624567573 -0.00349800014411306 0.9654696041862 TGCCCGCACCCCCATCCCGCGGCTGCTCGCCCGGATGCCTCTCCCCGGGGGATTGTGGTGGCTCCTCTGCTGCCGTCGAGGCTTTACTCTTCTGCATCGGGACTACGGGGACGGCGAGCTTAGCGGGGACGGGGACGAAGACGAGGACGAGGAGACCTTTGAGCTACGGACCCCGAGTCCAGCGGGCGGCGGGAGGGGCCCCCTAGATGTGACGTTGACTCAGCCTATGAGGAGTGGGCCAGTCTCAGACAGGACTGAGCAGGCGCTCCCGGACTCGGAACTGGCGGAATATGCGCGCTTCATACGGAGAGCGCTGGGCCGGACGCGCGGCCGGGAGCTAGTGCCATCGCTGGCCGAGATTTCCGCGCTGAGCCGACGGCAGGAGTTGTTGTGCACCGTGCACTGTCCGGGGGCTGGTGCCTGCCCTGTGGCCATAGACTCCCACACCACGGCGGGAGAGGTGGCTCGAGAGCTGGTGGGGCGGCTGGGCTTGACCCGGAGCCGTAATACATTCGCGCTGTACGAGCAACGAGGGGCGCAGGAACGAGCCCTGGCCGGGGGGACTCTCGTGGCCGACGTGCTCACCAGGTTTGAGAACTTGGCGGCGGAGGAAGCCGGGCTGGAGGACCCGCCGGACACCGGTTGGAGACTATGTCTGCGTCTTCACGGACCTCTGCACCCTGAGGGGCTGTCCCCAGACGGTCACGAACTGCCCTTCCTCTTTGAGCAGGCTCACGCTCTGCTGCTGCGCGGCCGGCCGCCCCCGCCCGACGACACGCTGCGCGCCCTGGCGGCGCTGCGCCTGCAGAGCCTGCACCGGGACTTCCCCCCGCGGGCGCCCCTGCCGCGCCTGGACCGCTTGCTGCCCACCCCGGCCCGGCCGCGTGAAGACCCTCCCCGCCCGGTGCCCAGGCCTCCCCCCTCCGCCGCCCTGCTGGCCGGGGCGATCTGGAGCCCGAGCCTGGCCAAGAGGCGGGCGGAGCGGGCCCGGCACGGCGGGGCCGGCCGCACGGCTGGAAGCGTGGCCCGCGAGGGAGGTGGCGGCGCCGGCAGGGCGGCTGCTGTGCTGGGAGGCTGGAAGCGGCTACGGGGCATGGGCCGAGCTGAGGCCATGGCTGCCTACCTGGCTCTGGCGGCGCAGTGTCCAGGGTTCGGCGCTGCTCGGTATGACGTTCTGGAGCTGAGCACGGAGCCTGGTGGGGGCGCTCCACAGAAGCTATGCCTGGGCCTGGGAGCCAAGGCCATGTCCCTCTCGCGGCCGGGTGAGACAGAGCCCATCCACAGTGTCAGCTATGGCCGTGTGGCCGCCTGCCAGCTAATGGGTCCCCACACCCTGGCCTTGAGGGTGGGAGAGAGCCAGCTCCTCCTGCAGAGTCCCCAGGTGGAAGAGATCGTGCAGCTGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGAGGCCCAGCAGCAGCCCTCCTCCATGCCAAGACCTGCCAGACACCTCCCCTCCCAGCCAGCACCCGGGTCTGGACGAGCCCCAGGGACAGTCGGGCTGTTTGGGGCAGCTGCAGGACTGAGCTTGCCAAGAGGTCACGACCTCCCTCTTGCCTCCAGCCTGGATCTGGACTACTCTGAGATTTCAGGGAACCATGGACCCTTTTGGCCCTGCAGGGACAGGGCATACCCCACACGCAAGGGCTGCAATGGGTGCAGACAATTTTCTAGTTTGTTTCTTAATTTATTTGTAGAAGAGAAGCAAAAAAAAAAAATCCTTATTTACACAAACCCTTCCTGTAGGAGTGTTGTCAGTGGGACAAGTTGGAGCCCCAGAGCTCAGAGCTCCACCCCCAGGGACGCCCACACTCCCAGGCTTTTACCAGCACTGAGAGGAGTCTGAACACCGCAGGGCTCCACCCTCCTTGACCTTCTAGATTTAACCTCCTCATGGCCAGTATGCTGCCCTAGGGTAGTGGGTGGGGCAGGCAAGAGGGCAGTTTTGGAAGCTGGCAATTACTCATCCTTCTTCCATTGAGTGGCATGGGGGTGGCCTCTTGGCGTCCCTGAGGCCCAAGGACAGTGAGTCACCAGGACTGGCACTACCCAGTCCTACCCTGGTGTCCAGCTTCTGGGTCTTAGTTGGGACCATCTTTAATGTGCCTACTGCTTTGGGCCTGGAACAGAAGAAGCCTGGAGCAGGATCAGACCCAAGAACTTCTCTGGCACAGACAATGCATTGATCGGGATGGGCTCAGCTTTACTCCTGAGCTCTGTTACTGCTTTATCAGATCAAGCTGAATTGGGTTAACTCCTGAGGATCTAAATGCCTTGGGCCTGGGAATCCAGAGTCTTGGCTTTCTTGACTTGCTCAGAATGCTGCAAGCCTTCTTTTAGCAGCCTCCACAGCCTCTGCCCTGAGTGGAGGAGGCTGGGGCAATATGGGCAATGTAGATCCACCCTCGGGCAGGACCTTAGGCACAGAGGAGACAGCAGACATCAGTAACGCTGGCTCCAGTCACACAGCCTGGTTCTAGGCAGGGATGCTCATGGAAACAATGGACACACGGACTGGGACTACCTGGTAAGACTAGAGCAGGTAAAGCCTACCCTACCAACACATGCCTGGGAACTGTGAGGCACCACGGAGATCCTTTCATTGTCCCCTGTATTCGCCTACCAAGGCCTGACAGCTATTCACAGACCAAGGCCTGAC EMBV3_00965 GGGTTGACATAAGTTACTGCACAGATTGCATCAGTACTGCAGTGTTACTTCCTTTGGAGG Gene GeneID:337870|MAD2L1:XM_002688039:2_cdna Constitutive 0 NULL GeneID:337870 6 GENE MAD2L1 MAD2 MAD2 mitotic arrest deficient-like 1 (yeast) EMBV3_00070 GAGGATGAAGAAGACGAAGTCGTCAATGAGGAAAGAACTAGCAGAGGCGCACAGAGCTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40638 GGTCGTGGTGGGGCGGGCGTGGGTCTGATGGTTAAGTTGTGGTTGAAGTGTTTTAGAAAT Gene BVV0102_379967 + 0 NULL GK000019.2:50803097-50814369 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094316 TCONS_00094317 1 XLOC_057412 Coding TCONS_00094316 XLOC_057412 Coding Coding C19H17orf101 19:50788112-50804573 = TSS70566 3005 1 TCONS_00094316_2 315 9 0.817982989064399 0.000859897407348063 0.00031525630128994 0.00125631514057345 0.000185580235468548 7.19764385457213e-06 5.15769349023383e-06 0.000246465038148325 3.49964430507268e-05 5.77631867326378e-05 2.19072625384274e-05 0 0 9.54835029239764e-07 1.56539026454347e-06 5.72466908291862e-06 0.000870130782131012 0.000419890984905699 0.0016532432482998 0.000426281958962328 0.00113195769651373 1.75940239642266e-05 0.000256074431605974 0.000720491576485562 0.000129770886186461 0.000140487460539449 0.000216700147209615 0.000752761082163994 1.52253473296171e-20 2.12332965166869e-05 4.60172318228659e-05 XM_582598.6 OGFOD3 PREDICTED: Bos taurus 2-oxoglutarate and iron-dependent oxygenase domain containing 3 (OGFOD3), mRNA. 0.0 5420 100.00 0.999667221297837 NM_024648.2 OGFOD3 Homo sapiens 2-oxoglutarate and iron-dependent oxygenase domain containing 3 (OGFOD3), transcript variant 1, mRNA. 0.0 1045 78.67 0.415640599001664 TCONS_00094316_2 sp|Q6PK18|OGFD3_HUMAN OGFD3_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3; 0.0 531 83.65 0.993650793650794 2 coding 0 0 0 0 -2.65244087052308 0.0226036297918406 -0.231909751102737 0.0223573352325289 GGCTGAGGGTGTCGCTTCGCGTGCCCGGCCGCGCCGGCCTCGCGCTACCTCTCGCAGCGCTCGTCCCGGGCTTGTGGCGGCTCCAGCATTCGGCCTAGTTTCGCGGCAGCGTAGCTAATGGCACCTCAGCGGAGGGGTGCTCCCAAGGCCCCCGAGGGCAGCGGGGCAGCGGAGCGTCGGCGCCAGAGCAGCACCAAGAGTGTCCGGGCGCCTCGGGATGTGCGCAAGAGGTGGTTAAGAGTCGTTGTCCTGGGGTCCTGCACTGCTCTCGCCGCCTGCCTGTTCTGGGGCAGCCTGGGGGGTGATGACGGCATCACTGAGGTCCTGGCTCACCGCAGCGAGATCCTGCCAGGCAGGTTCATCGAGGTGCCCTGCTCTGAGGACTATGACAGTCACCGAAGGTTTGAAGGCTGCTCCCCGAGGAAGTGTGGCCGGGGCATCAGCGATGCCGTCATCACCAGGGACGAAGCCCGAAGGATTCGCAGCATAGCCGAGAAGGGGTTGTCCCTGGGAGGATCCGATGGAGGGGCATCCATCCTGGACCTGCACTCAGGGGCCTTATCTGTTGGGAAGCACTTTGTAAACCTGTACAGATACTTTGGGGATAAAATACAAACTATCTTCTCAGAAGAGGACTTCCAATTGTACCGGGACGTGCGGCAGAAGGTCCAGCTGGCGATCGCCCAGGCGTTTGGCATCAGTGCGTCTTCGCTGCACCTGACGAAGCCCACCTTCTTCTCCCGCATCAACAGCACGGAGGCCCGGACAGCTCACGATGAGTATTGGCATGCTCACGTGGACAAGGTGACCTATGGTTCCTTTGACTACACATCACTACTGTACCTTTCCGACTACCTGGACGACTTCGGTGGGGGGCGGTTTGTGTTCATGGAGGAGGGGGCCAACAAGACAGTGGAGCCAAGAGCAGGTCGGGTATCCTTCTTCACCTCCGGGTCTGAGAACCTGCATCGGGTGGAGAAGGTCCACTGGGGCACCCGCTATGCCATCACCATTGCCTTCAGCTGCAACCCCGACCACGGCATCTCGGACCCAACGCTCACGTAGCCCCCTCAGGCGGCCCGCCCAGCAGCCCTGCCCGGAAGCAGCCACGCTGGACGTGCACCCCTCCCCTCCTGCTCAACTCATTTCTACCATTTCCACTGAACAAGGTGCCTTATGAATCATCCCAAATTTTGATTTGCTAACGTTTGATCATTTTTCAACTGTGAGTAAGTAGAGGGGACCAGCTTCCCCTCACAAGGATCAGTGTTGACTGTACTGTGCTGACGTGGGGCTTGGGAGCTGGCAGGGCAGCCACTCCCTCCTTTCTCAGGAAGGAGTCCTGTGCCCAGGGTGGAGTCCCTATTTGTCAGCAGACAGAGGGTCATTCCCTGGCCACTGGAGACCAACTTAAGTGCAGATGAAGCCAAGTGGGGCCAGCAGCCTCTGCTCGGGGAAGCAGAATCAGTGATCATGACACCTTGAGAAGGTTCTGGGAGCAGGCAGCTCCAGGGGCAGCAATAGTGGGGCTGGGAGGGCTAACAGTGCTGGATTCTGGATGCAGGTGAGCATCTGATATTCTGGTAGCTCTGTGCAGAGCACCCCAATGCTGCCGGCCCCTGAGAGTCACCCTGACGCTGTGTTCATGCCAGGCTGGGCTCTGCTCCATCACCGGCCAGGGTCCCTGACACAAGCCTGAAGTGTGCTCCCAGTGTGGCCATCCTCAGCTCACCCGGGATTTCCTGTCCAGCTGAGGGTCTGTCTGTGCAAGTTCAGGTCTTTACAACCCCCTCCTCGTCTCAGAACCATCCATGCCTTTTTCGTAAAAGTAATGGTCATGGGAGCCAGGAATGGTAAATAGACCAGCCGTGGGGGAGGCCTAGGCAGCACAGCCCAGGGGGAAGGTCGTGTTCATCAGTTGGCTTCTGCCAGGGTTGGGCAAGGTTTCACGGCTGCCCTACAAAGCATCTGGCCTTGGGTTTGGGTACCTGCTGGGAGAAGAGTTAGTCATCCTGCTCCACCTGCCTTGAGAGAGCCCCAGAAATGGCTGTGGGGGCAGGACTCTCCTGGCCACCCTGACCCGGGAGGAACCGCAGCACCTTCTCCTCCGCCCACCCAGTGTGAACACTTGCCCCCTGTGTTACAGAAAGCTGCACCCTTGGCCACCACAACCCCACGGGTTCCCCAAGCTCTGCAGCCACTGGGCTCCAGGGAGGGGCAGAGGTTCTGGACCCTGGGATGAGCCCTTGTGAGGCCCGTAAGGCTTTAGTGAGGGTCTGGAAGCTGGGACCCTTGGGTCTGCACCTCGGTCTGCCGGGAGTCCCTCCTGCTGGTGGGTGATGATATGCATGTCTCAGCACTGTGGGCCTAGCTTCCACGTGCAGACGATGACGTGGGGTGTGCTCCCCTCTAGATCGGGACGACAGGTTGTGGGGAGGTGGGCCCTCCATCCCCACAGGAGCCTGGATCGTGGTTCCTATTTCTAAAGGACTTCAGGCAGATCTGGGAAGGATGAAGGCAGGCTCTGGGTGGAAGACCGGGGTGACCTTAGGGTCGCAGTGCTTGGACACACTGTCTCTAGGTTGGACCAGCAGCCTCAGTCTGTGCAGGAAAAGCTGTCTCCTCCCGTCCGGGTTGTCCTCTGGCTTCTCCCAGTTTGGCTTTTCAGAGGTTGGTTGCTTTGGCCTCGGAATGGGATGCTGTGAACTCTGATAGGGAAGCCCAGCATGGGCCTCTCTTTGTTCTGTAACTTTTGAGTTATCTGAGTGACGCTGTACCCTCAGTTTGAGGATGGGCAGACGTCCCTGGGTGTTCCATGGCCCACATGGCCACTTGCTACATCTCAGGGCGGTCGTGGTGGGGCGGGCGTGGGTCTGATGGTTAAGTTGTGGTTGAAGTGTTTTAGAAATAACTAAGATACTGGTTTTCATTGACAGTCTTTGCTACTTATCCTATTCATACTCATCACAGAGGTTCTTGGACAAAGAAATAAAGATTTGGGCAAA EMBV3_18900 TGAAGTGTTTGGGTGCCTTGCCCGAAGATTCACCGCGAAGTGTCGAGATCAAAACCCAGA Gene BVT0102_242804 + 0 NULL GK000003.2:26438342-26584421 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176313 1 XLOC_106091 NonCoding TCONS_00176313 XLOC_106091 NonCoding NonCoding - 3:26447545-26448278 - TSS131072 733 1 TCONS_00176313_1 40 1 0 0.0011136989829137 2.74171874813252e-05 0.000517617707025429 0.00082701617240799 0.000229009370143918 5.36802468149583e-05 0.000278458433667436 0.000104899541150109 0.000635086028328114 4.49057889476939e-05 3.12303630132303e-06 0 2.74010775488482e-05 0.00114872225598114 3.34665767476119e-05 0 0 0 0.00073372445475662 0.000304139724012009 4.14150922370229e-06 1.01236972433681e-05 0 0 0.00028356544502871 0.000124953821959734 0.000327729314747567 0 0 0.000336292091682912 0 noncoding 0 0 0 0 0.0222448572848792 0.926301206717863 -0.0349561373230199 0.521427332623934 CCCCCACCTCGGGGCCCCCGCCCCGCCACAAACTTTCCTCCGACCTTTAAAAGTTGGCCTTGGAAAGACTCGTCTGGAAATCCCATCGATTGAGCGCCATTCCGAGCCACCCCGCGTCCCAGCACTCTGGAGTCCCCACGTGGGCCTCCGGGTCCCTCAGCTAACTCCCCGCACGGTCACCCACTCGTCCCGAACGAAGCACCCAGCAACCAGCCGCTAGGACTTGGCTAAATATTATCCAGATAGGACTGAAAGAGATGGAAGGACTGTAAACTCCGGGGATGCCAGCCTCCAAGGTGCAGAGGCGTGAAGTGTTTGGGTGCCTTGCCCGAAGATTCACCGCGAAGTGTCGAGATCAAAACCCAGATCTCACAGGCTCTGCTCACTGCCCTGTGGTTGGGTAGGCCTCACCTCCCTTCGCCCACCTCCTTCCTTCTCCGGAGTGCCTATGGCATTGATTAACACTTACCACAAATAGACCCACGGTGGGGGGGACGCGGACGCTCAGAACCCAAGTGTATTAATAGCTTCAGTACTTCATATGGAATGTACTCTTTAAACTTTTTATTTATTGCTTTAAGTGGACAGAACTGGTTGCCAATAAAGATTCTTTTCTTCTCCCACAATGGGGCTTTGTGCTTTTAATTTGAATACAAAAGACCCAGTATTAGGGGGAAATTTTTAGTGTTCATTGTTTAAAACTTCTCAAGGATAATTCAAACACAGCACTGGT TCONS_00172657 . 5' 391 TCONS_00172657 . 5' 391 EMBV3_24418 CCCTCTTTATCGGCTGGTTTGCTGGATTTTCTCTCCTGCTGGGAGGGTGTCTGCTGAACT Gene GeneID:616036|CLDN22:XM_002698670:152_cdna Constitutive 0 NULL GeneID:616036 27 GENE CLDN22 NULL claudin 22 EMBV3_19925 GGGGATCTTAAACCCCTGACACACATACTCCTACATCCAGGGACCTAGCGACTTTAGCAG Gene BVV0102_247199 + 0 NULL GK000001.2:1408235-1467703 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002859 TCONS_00002860 1 XLOC_000706 Coding TCONS_00002860 XLOC_000706 Coding Coding IFNAR1 1:1465624-1496190 = TSS1461 5410 1 TCONS_00002860_2 560 0.102772643253235 11 0.823360052347456 2.12655440828253e-11 4.50213982292123e-11 1.07148481059935e-08 7.09439584620252e-09 8.12873371097737e-06 3.42019311065698e-12 4.71789580075477e-05 3.57518630803167e-11 5.72008015220235e-08 3.63314259941339e-09 9.65762337396304e-06 3.0930948112137e-09 4.43676679525471e-12 7.61016619751486e-12 4.52288069302988e-09 0.00284153710933059 0.00136325669506145 0.00179595397669742 1.50582917379394e-11 1.32976540359559e-05 2.93814399530181e-12 6.27078321541069e-09 0.0017062553966252 0.00272803151525261 8.31692606181446e-12 6.37521635018663e-09 3.62589515863228e-11 0.000200518285074786 0.000142376509289104 7.57959383729948e-05 NM_174552.2 IFNAR1 Bos taurus interferon (alpha, beta and omega) receptor 1 (IFNAR1), 0.0 5817 99.30 0.608317929759704 NM_000629.2 IFNAR1 Homo sapiens interferon (alpha, beta and omega) receptor 1 (IFNAR1), mRNA. 0.0 1563 78.60 0.350092421441774 TCONS_00002860_2 sp|Q04790|INAR1_BOVIN INAR1_BOVIN Interferon alpha/beta receptor 1; 0.0 1153 100.00 0.998214285714286 2 noncoding 0 0 0 0 -0.108219208612353 0.525598223100763 0.0138695834718371 0.801206188954036 ACACACGAGGTGAAGGCACGGCGCGTGCGCAGGTCGGAGGGCTGAGGGAAGGGCCGACGCGGAGTGGGCGGGGCCGGAGCGGCTGGAGGGACATGGCGAACTAGGGGCGCTGGCCTTGGCGGGACGGCCTGGGTGCCTCAGTCTCTGTCGCGGCGCCGCGCGGTGCCTGCCGCGGTAGTGGGTGGCCGAAAGATGTGACTGGAGGGCTACCGGCGGCCCGCGGACGATGCTCGCTCTCCTGGGCGCGACGACCCTGATGCTGGTCGCTGGGAGATGGGTGCTGCCCGCCGCCTCAGGGGAAGCAAATCTGAAGCCTGAAAATGTCGAGATCCACATCATTGATGACAATTTTTTCCTGAAGTGGAACAGCAGCAGTGAGTCTGTCAAGAATGTGACTTTTTCAGCAGATTATCAAATACTAGGAACGGATAACTGGAAGAAATTGTCTGGGTGTCAACATATTACTAGTACCAAATGCAACTTTTCTTCAGTCGAGCTTGAAAATGTTTTTGAAAAAATTGAATTGCGCATAAGAGCAGAAGAAGGAAACAACACTTCCACATGGTATGAGGTTGAGCCATTTGTACCATTTCTAGAAGCTCAGATTGGTCCCCCAGATGTGCATTTAGAAGCTGAAGATAAGGCAATAATACTGAGTATCTCTCCCCCTGGAACAAAAGATAGTATCATGTGGGCTATGGATCGTTCAAGCTTTAGGTATAGCGTCGTTATCTGGAAAAACTCTTCAAGTCTAGAAGAAAGAACGGAAACTGTTTATCCCGAAGATAAAATTTATAAACTGTCACCAGAGATTACTTATTGTTTAAAAGTTAAAGCAGAACTGCGTTTACAAAGTAGAGTTGGTTGCTATAGTCCAGTGTATTGTATAAATACCACAGAGAGACATAAAGTACCTTCACCAGAAAATATACAAATCAATGCTGACAACCAGATCTATGTTCTTAAGTGGGATTACCCATATGAAAACGCAACTTTTCAAGCTCAGTGGCTCCGTGCCTTTTTTAAAAAGATTCCTGGGAATCATTCAGACAAATGGAAACAAATACCGAACTGTGAAAATGTCACAAGTACCCACTGTGTCTTTCCTCGAGAGGTTTCCTCAAGGGGAATTTACTATGTCCGTGTACGAGCATCTAATGGAAATGGTACCTCTTTTTGGTCTGAAGAGAAGGAATTTAATACTGAAATGAAAACTATCATATTTCCTCCAGTCATCAGCGTGAAATCCGTTACTGATGATTCACTGCATGTCAGTGTTGGTGCTTCAGAAGAGTCTGAAAACATGTCTGTGAATCAGCTCTACCCGCTAATTTATGAAGTAATTTTTTGGGAAAACACTTCAAATGCTGAGAGAAAAGTTCTAGAGAAAAGAACCAATTTTATCTTTCCTGACTTGAAACCGCTGACTGTGTATTGTGTCAAAGCCAGAGCACTCATTGAAAATGACAGGCGGAATAAAGGGAGCAGTTTTAGTGATACTGTGTGTGAGAAAACAAAACCAGGAAATACTTCCAAAACCTGGCTTATAGTTGGAACTTGCACTGCATTGTTTTCTATTCCTGTGGTCATTTATGTTGTGAGCGTCTTCTTGAGATGTGTCAAGTATGTGTTCTTTCCATCAAGTAAACCTCCTTCCTCTGTTGACGAGTATTTCTCCGATCAGCCACTAAGGAATCTACTCCTTTCCACTTCTGAGGAACAAACGGAAAGATGTTTTATAATTGAAAATGCAAGCATTATTACTGAAATAGAAGAGACTGATGAAATTGATGAAGTTCACAAAAAGTACAGTTCCCAAACTAGTCAAGATTCAGGAAACTATTCAAACGAAGATGAAAACAGTGGAAGCAAAATAAGCGAAGAGTTTCCGCAACAGGACAGTGTGTGACCAGGAATGACCCTGAAACATTAGGGAGTCTTGCAAGAGTCAGAGTGGGAGCCTGGGCTTTTTGCTCTTCTCAGTAACTGTCAAAAGAAGATTGTCCGTGTCGGGGAAGAAAAAGCGTCTTCAGATCGCAGGTCCAAAAAATACAGGCAAGCACTTCACTATTTAAAATGAATTTCAAGAAGTTTTCTGCGTCCTTTGCCACGTGTCAAGTCTTGAAAGGCCTGTCATTGGACCTGCCTTGGATGAGAGGCGTTAAGTCCAGAAGATACCCTCTGTCTCCCTCACGCTACTGTAAGCAGCCCTGTGCTGGCGTGGGGTTTGGGGGTGCTTGTGTTCCCATCAGCTGGTGCTGTCGCTGTGTAACGCTGCGCTGCTCCCTCTCCCCCACAGCATTATAGTTCACTATTTTTCAGGAGATATTCAGAACATTTGGTCTTCTTCAAAGAAGAACCTGAATACCACCATCACTTGATTTTCTGAAAAAGTAGCTTACTCTGGAAAACAGCTGCAGATGCCAGAAACGAGGTTCTTATAGATTTTTCAGGGGGATTCTCTCTGTTTATACCAATCACATTTATACCAGTTGCAAGAAATGTGGGTTCAGTCCTTGGGTCGGGAAGATCCTCTAGAGGAGGGCATGGCAACTCACTCCAGTATTCATGCCTGGAAAATCCCATAGGCGGAGAAGCCTGGCGGGCTACAGTCCACGAGGTCACAGAGAGTCGGACACTGAAGCGACTGAACGTGCATACACGCGTACCAATTACATTGGCCTCTGCATCACAGTTACCCATCCCTTCTACAGTTTAGAATTAAAACCATGTCATCTTTTACTATATGTACATTAAGGCTTCCTGTTTCAGAACATTAGGACACTAGCTTCTGATTAGAAGGCATAATCCCTAAAATTACAGAGAAATGGGGAACAGGCTGAGTAGAGAAGTTACTGTTATCTCTTAGGATATGGGAGTGTGGAACGTTAGTGGCAGTGTATGTAAAGTCTTGGGATCAGAAAATGCTACTGAGAAACAGTAAGTAGTGTGAGTCAGTGGGAAAGAAGCAGGTAGCTTTAGTGAAAAATAAGAATAATGTGCATCGTCAGCTTCTGATTACTAACATCCTGAGGGGTGGCATTTGTTTTCACGGCTCATCTGTGTCACTTCTTAACATAAGCTGGCCGGCTTCTGTCCACTGTGGGGCAATATTCACAGGCATGCAGGTATCGCTTCCGCTCAGCCTGCATGCACTCAAGGAAATGCAAGTTATTTATCATCAGAGTGTGGGAGGAAATGAACTAGGAAGGAAACCTGAGTTTTTAAAATTATGTAAAACCTCTCAAAGGCATCTATAATTTATGTTTAAATGATTTTGCTGTTTGGGCTTATTCATGGAGTTCCTGCAGAGAAAGGAAGTGTAGGAATTCTGGCTACCTCTGAGGCCAAGTTCTCAGCTTCAGTCGTTGCAGCAGGACTGAGGAAAGAGAGATGGCACCACCCAGCACATCAGGTCTGGCTGGGCTCATTTAGACTGGTCCGCAGGGTCTTCTGGGTGGAAGAAGAGGTTGAAAGCAGCTGCGCTGAGAAGGGCTGTGGCGCCCCGCCTGTCCTCTCCAGAGCACCTTGGGCTCCGCTGGGCCTCCATCCAGCTCCTCAGGGAGTGCATGGTCAGGAGGCCCCAACCAGGGCGTTTCTCTGCTGCAGAATCCTTCCAGAGTCCCAAACGCACCTCAGATCCTCTGACCAGAGGCATTTGGTTTAAAGCAGATCAGGACTCGCCCTTCGCTGGGAAAGGCCCCGTCCGTCCTTGGGAACTTGTCACTGTCGAGAGGACCCTGCCCCCGCCGGCTTCCGCGCTGGGTCAAGGCGGCCGGCCTGCCCTGCAGTCGGGCCTGGGATTTTCCACAGGAAAAACACTGCTTCGGACTGGGAACAGTGCCTTTGTGGGACGTGGCAGAGGGAAAACTAGGGCATTATAAGGCAGAGATGCTGCTAAAGTCGCTAGGTCCCTGGATGTAGGAGTATGTGTGTCTGGGGTTTAAGATCCCCTGTGGTTTTCAATAAACAAGCATCTGAGCGGCCTCGAACAAAAACCCCTCCGTTTTGCCGCATCTTGCAGACCTGAAAATGCAGTTCCATCCCATTCTTCATTGTGGTCCACATGTAGCTTAATGAAGATGTGCTTACTTGTAAGATGGTAAGTATTTTTTCTGAAAAAATAGTTTGCTTGCAAACACTATATACTTGAGAGCAGCAATAAACTTCCTCAAATCTGTGATACTGATAACTCTTGGAGAGGCTGGATATAATGTAAGCATTTATGTAGAAGATTTGTGTCATTGCAGCCAGAAATCAGGTATTCATATGTAATGTAGATTAATATATACATAGTAACACGGGTCTGTAAACATACATGTTCACATATGATGCTGGCTACTGTGCCACTGCTGCTGCTCCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGCGACCCCATAGACGGCAACCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCAGGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCCAACTCTTAGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGTGCCATCGCCTTCGACTGTGCCACTAGTACATCCATAAACACTTAGCATAGGTTCTAGTTAGAAAAGGGTAAATGCTGCTCTAGAACTATGAGCTTCTAAATCTTGACCAGAAATTTGCAACATATAAAGTTATTTCTATATATTTAGGGACTTCTTGGTGGTCCAGTGGCTAAGACTCTGAGCTCCCAATGCAGGGGCCCTGGGTTTGATCCCTGTTCAGGGAAACTAGATTCTACATGCCACGACTAAGACTCGGCACTGTCCAATAAATTTTTTAAGTGTATATGTGTATATATATATATATATATATAGTTTGTATAACATCTTTTCCCCAAACCTACCTTCAAAGCAGCCTCAGATTGCTTCTAAGAATTTGGAAGTGTCCAGCTTTTCCTACCTCCTCCCCATCCCTGTAACCCTTGGACTACCTGACACGTTTGTGTTTGTTTCAGCTGGTGTCTGTCTGCCCCTCGCAGGGGACCAGAAGCTCTGTGAGCTCAGGAATATACACTTAGCACTGTATCCCCAGTACCTACCAGGGTGCGGTGCTCACGCGGAAGAATTGCATAGGAAATAATTGTCAAGTGAGGGAAACCTAGAATTTGAACCAAGTGGGTGTTTCCGTTTGTCTGTCTTATTGAGGCAGAGGACACGGCCATATTTCCAGTGTTTCTATGAAAACACAGCGAGTGTTGCCAGTGTTTGTGTCTTATTTCGTGGGTACTTTGTCTTAATGCCCACTGCCATTGTTTTTTAAACATTTGTAACAGTTTCTGTAATAAACACTGAGGCCAAAAGTCTT EMBV3_12255 AGAAACGAAAATGGAGAGAACACAACAGACAACACAGAAATACAAAGGATCATAAGAGAC Gene BVT0102_120558 + 0 NULL GK000007.2:10293739-10311588 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209635 TCONS_00010779 TCONS_00136862 TCONS_00238892 TCONS_00233446 TCONS_00208375 TCONS_00031937 TCONS_00179125 TCONS_00224115 TCONS_00023028 TCONS_00031916 TCONS_00253241 TCONS_00251858 TCONS_00250504 TCONS_00177939 TCONS_00124128 TCONS_00130261 TCONS_00251853 TCONS_00124121 TCONS_00135549 TCONS_00207136 TCONS_00165811 TCONS_00200329 TCONS_00135527 TCONS_00249014 TCONS_00166941 TCONS_00152669 TCONS_00012569 TCONS_00079688 TCONS_00141271 TCONS_00111488 TCONS_00012572 TCONS_00238434 TCONS_00055354 TCONS_00249620 TCONS_00223458 TCONS_00071045 TCONS_00039852 TCONS_00070842 TCONS_00251280 TCONS_00139971 TCONS_00109885 TCONS_00056147 TCONS_00207067 TCONS_00190575 TCONS_00254568 TCONS_00233374 TCONS_00048373 TCONS_00012578 TCONS_00122496 TCONS_00162777 TCONS_00152746 TCONS_00007508 TCONS_00208725 TCONS_00122326 TCONS_00011865 TCONS_00177025 TCONS_00239075 TCONS_00188739 TCONS_00197542 TCONS_00252355 TCONS_00187395 TCONS_00251295 61 XLOC_128146 XLOC_006330 XLOC_083073 XLOC_145558 XLOC_142928 XLOC_126888 XLOC_018182 XLOC_108898 XLOC_137411 XLOC_013698 XLOC_018161 XLOC_156182 XLOC_154799 XLOC_153447 XLOC_107712 XLOC_075680 XLOC_078972 XLOC_154794 XLOC_075673 XLOC_081772 XLOC_125654 XLOC_100651 XLOC_121981 XLOC_081750 XLOC_151957 XLOC_101777 XLOC_092434 XLOC_007888 XLOC_048572 XLOC_085699 XLOC_067388 XLOC_145101 XLOC_033162 XLOC_152563 XLOC_136758 XLOC_042818 XLOC_023669 XLOC_042619 XLOC_154223 XLOC_085033 XLOC_065789 XLOC_033950 XLOC_125586 XLOC_116610 XLOC_157500 XLOC_142856 XLOC_028505 XLOC_074051 XLOC_099658 XLOC_092511 XLOC_003069 XLOC_127237 XLOC_073881 XLOC_007415 XLOC_106799 XLOC_145741 XLOC_114780 XLOC_119203 XLOC_155296 XLOC_113441 XLOC_154237 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_24740 GAGTGCTAAGTACAGTGGCTCTCACAGTTCAGTCCCTCAATCAACAGTATCACTAGTCAA Gene GeneID:515180|MFN1:XM_002684903:32_cdna UTR3_Alt 3 NULL GeneID:515180 1 GENE MFN1 NULL mitofusin 1 EMBV3_34940 GGCTGCCATGTCCTATGACCGCTACATTGCTATCTGCAAACTGCTGCATTACATGACCAT Gene GeneID:787659|LOC787659:XM_002687456:266_cdna Constitutive 0 NULL GeneID:787659 5 GENE LOC787659 NULL similar to olfactory receptor, family 6, subfamily C, member 1 EMBV3_36558 GCCTTGGGCAACTATATGAATCCACTTAGGCCGCCATGACAGAATGCCATACACCAGATG Gene BVT0102_109956 + 1 EMBV3_37485 GK000011.2:98394705-98400783 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033979 1 XLOC_020212 NonCoding TCONS_00033979 XLOC_020212 NonCoding NonCoding - 11:98398165-98398976 - TSS24978 811 1 TCONS_00033979_2 76 0.361282367447596 1 0 0 0 0 0 0 0 0 0 0 0 1.41133671930776e-05 9.69974786275615e-05 3.5379560891394e-06 0.000284211619845243 7.25947975210791e-05 0 0 0 0 0 0 0 0 0 0 0 0 0.000793522695207358 0 0 XM_001790527.4 FYCO1 PREDICTED: Bos taurus FYVE and coiled-coil domain containing 1 (FYCO1), transcript variant X1, mRNA. 3e-44 183 86.08 0.186189889025894 XM_005265483.1 FYCO1 PREDICTED: Homo sapiens FYVE and coiled-coil domain containing 1 (FYCO1), transcript variant X1, mRNA. 1e-43 181 86.45 0.18249075215783 0 noncoding 0 0 0 0 0.00520758897002241 0.959443435320445 -0.00794183347084328 0.91358430605872 GAGGCCTCAGGAAACAGCCTGCCGACACTTTGGCCCCCGACTTCCAGACAGAACTTGACAAATTAGATTTCTGTTGTTGAAGTCATCTGGTGTATGGCATTCTGTCATGGCGGCCTAAGTGGATTCATATAGTTGCCCAAGGCAAGAAAAGCTTCATAGAGTTGCTGAAATCAGGAGGACTGCTGACAGATACGCCCAGAAACTCTGACAAGGCTCAACACTGACCACTCCCCGAGCACTTGGTGTTATTCAAGGACTACCTGCCCTGAGCACTGTCCGCAGGCACCTTCCCTTAATCAAAGACAGGCTTTGATCCTGCTTCCAAGCTTTCCTAATCCTTTGATGAGAAAGCGCAAGGCCAGGGACTTCCCTGGAGGTCCAGTGGCTAAGACTCAAGCTCCCAAACAGGGGGCCTGGCTTCAATCCCTGGCCAGGGAACTAGATTTCACACACAACTAAGAGTTCACATGCCACAATGAAAAGATCCTGTGTGCTGCAACTAAGACCCCGTGAACCCAAATCAAATTTTTTTTTAAAGAGAGAAGGCACGATACCAGGCACTTTATGATAACTCAGGAAATGGAGGTGATGTCTACTCACTGTTCAGCCACATTTGGGTCAAGAGAATCAGTCTCAGTGGGTGTTTCGGGCAAGGAGGAGCTGGACTCCTGTATCTGGCACAAGCCCTCATCTGTGATGATGGCAAACACAGGTCATCTGGTGGCGTCTGTGTTTGTACCTTGGCCTCAGGCAAAACGCAAATATGCATGTGTGTGTGTATGTGTATATATATAATATGTAATAATATATA TCONS_00026101 . 5' 1808 TCONS_00026101 . 5' 1808 EMBV3_04551 CGGATTAACGAGTGCATCGCCCAGCTGAAGGATCTCCTCCCCGAACATCTCAAACTTACA Gene GeneID:506945|BHLHB2:NM_001024929:14_cdna UTR3_Alt 2 NULL GeneID:506945 22 GENE BHLHB2 NULL basic helix-loop-helix domain containing, class B, 2 EMBV3_03537 CAAGCAACTTCCCAGTGCTATTGAAGTCTGGGTGTAGGTTGTTGGCGCAGTTTGGTGATG Gene BVT0101_032478 + 0 NULL GK000029.2:45130555-45154872 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165498 1 XLOC_100540 Coding TCONS_00165498 XLOC_100540 NonCoding Coding - 29:45150486-45153415 - TSS123609 1398 2 TCONS_00165498_3 55 3 0.523565573770492 9.73225279018046e-06 0 3.76227463691861e-46 0 1.05948115090113e-05 0.000332040603754661 3.03416703441224e-39 4.23084340705196e-07 0 4.14531638297184e-71 1.63747153926148e-06 0 6.55796358113904e-05 0.000553510326812643 0.000292311399155599 0.000259653244461972 0.000290762092316657 0.00112522214048912 9.84930835358842e-191 0 2.17148396263772e-07 9.28802764204431e-20 0.000225270598174026 0.000225480128239276 4.95178241522003e-06 0 5.65726370945473e-32 0.000398497578110215 6.94507842701076e-05 4.58369980266905e-05 XM_005227083.1 MRPL11 PREDICTED: Bos taurus mitochondrial ribosomal protein L11 (MRPL11), 1e-89 334 100.00 0.131616595135908 XR_247672.1 LOC101928090 PREDICTED: Homo sapiens uncharacterized LOC101928090 (LOC101928090), misc_RNA. 4e-08 64.4 79.75 0.0550786838340486 0 noncoding 0 0 0 0 0.0680769385852649 0.568425577942846 0.0869866855891196 0.259524703007063 GAAGCCACGCCCACCACTCTGCTTTAGGAACGCTCTCTCCCAACTTCGCGTCAGCCGGGACTCTCAGGGATCAAAAGTGGATTTCAGCTGTGTGACTCCAGTCTGGACTCATGGCTTCTATATACCTTGTTGCTATGACTCGGGACCACAGGATGGCAAGAGGGCAGTCAGAGGTACAGAGCAGGAGAGACCCAGAAATGCATCAGGAGCCTCCAAACTGAAGTTTGAAGTCTCACCTGTGGAGTGGACACACCGCCCTGGATCCTTTCTTAACTGGGACTCCAGATTACTGTTAACAAGCAACTTCCCAGTGCTATTGAAGTCTGGGTGTAGGTTGTTGGCGCAGTTTGGTGATGTATATACTATTGCTTCTCTTCATTGTTTCTATTTCTTTTAATGACTGTATATTGAAATTAAGTAAAATAATCCTCTGTTAAGTATTGAAATTGTTTATTAGTGTGTAATAAGTGGTTTCTTTTGTGAAAAAAAAAAAAAAATCCCTCAAACCTAAAACTAAAGTAAAACTTTGGGCAAAACAATAACCAAGAGTTAGGGGAAGCCCAGAGGGTGGACCTTTAATTTGCATCTTTAGAGTGCATGTTTTATTGAAGAAATCAAGGAAAGCTGCACAGAGGAGGCATTCTTTGACCCCCACATCGAGAAAAACAAGTGAAAGTTGGCCCACACACTGTGGAGGAGCACACTTCCTCTCCCTCTCGCAACTTGTTGTTTATGAAGCTGCCAATCTTCAAGACTCCTCCTGGGTCTTACCACATCCACACACCCCACTAACTCCTCCATCTAAAAATAGTCCAAGATACCAACTGCTTTGCCAACTGTTCTCGGGCTCCAGGAGCCAGATGAAACGAGAAAGCAGCCGACAGCACACCCTTTGAGGACAAAAGCACCCACTAATCGAAGAGAAAGTCCCTGAGCAGGCTGGACCGCTGGGCTCCTGGCAGCAGGTCGTACAAATCCTGCACCACAGGATTGCTCCCATCCCTGCTTCCCTACCTGCATACCAGGTATGCATATCTGCAATAGGCCATGGGGACACTGGGACAGTCTTACTCCTCTTTGCACTCCCAGCTTCCAGGACATTGCCTGCCAAAGCAGGCCCTCTGTGAACATATACTGAATTATGATACAGCCAGGTCACAGAGCCAGACGGGTGTGGAACTGAGGTTTGACCAGAGCTCCAGTGCTACCACCTGACACCAGATGGCGGGAAGGGCTAAGAGAGGTTCAAAGGCTTTGTTCCAAGAGGCAGAGATTTCTCCTGTGGTCAAGCACTGGGCTGGGAGTTGTATGGTGGGCACAGCCAGACCAGCAGGGACCTCTGGAATCATGGGATGGGCCTGAATGCAGCATTGCATTTTCCAGGATAGGGAGAGGAAG TCONS_00165494 TCONS_00165495 TCONS_00165496 s 3' 930 TCONS_00165496 TCONS_00165496 s 5' 0 EMBV3_40186 GTCCAGGTCCATCATGTCAGAACCGTGTTAAAATTGTAGAACTCCTAGCTGGTGTGTGAG Gene BVV0102_032076 - 0 NULL GK000018.2:49580563-49650518 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083758 TCONS_00083753 1 XLOC_051339 Coding TCONS_00083758 XLOC_051339 Coding Coding - 18:49601414-49612077 - TSS62858 6440 2 TCONS_00083758_1 208 0.638043478260869 3 0.396267116863628 0.000943889657822851 0.000751524656545171 0.000883820996793107 0.000518961698659881 0.000224103825109003 0.000326759283448257 0.000440871278651746 0.00067582255638532 0.000982738241441573 0.00144215544788365 0.000210247514762654 0.00031216395971232 0.00345814868531405 0.00643750615328137 0.00400541017997065 1.40169471972148e-07 0 1.31695658504018e-07 0.00092455679629714 0.000843497537987365 0.000557104671610273 3.5271367645083e-08 0.00010612841680718 0.000428633752735716 0.000757879132994471 0.000498892210316821 0.000524413691707609 0.000123791928041601 0.000149510958225322 1.13607017503458e-10 XR_228506.1 LOC101904931 PREDICTED: Bos taurus uncharacterized LOC101904931 (LOC101904931), 2e-133 482 100.00 0.041304347826087 TCONS_00083758_1 sp|A8MZ59|LEUTX_HUMAN LEUTX_HUMAN Leucine-twenty homeobox; 1e-25 100 38.85 0.725961538461538 1 noncoding 0 0 1 1 0.0441274395763978 0.791115734030412 -0.0192560600354996 0.802294799857477 GGGGTAGGGTGGGGGCATGATTTTGTTAAAATTTTGCTTAAATATTAGGCCTCTAAACCCAGCAGACTACAGTTCATAGTCAGGCAACACCTGGTCGAATCACTGTGCTTCTCAAGGATTTCTCATGGCAGAAAAACAAAATTCAACTCGGCGATTCCGCACACGCTTTAATGGAGAACAGCTAGGAGCACTAAGAGATGTATTTGAAAGGACCAGGTACCCACATTGTTTCCTCATAAGAACACTTGCTTCAACTATTCATCTTGATGCGTCAGTTATAAAGACTTGGTTTAAAAACCAACGTGTCAAAAGGAGGAGGGAGGAGAATCAGACTCAGCAAAATCTGTCACCAGGAGACCCGCGCCGGGTTGTCTCAGTGAAGGAGGAAGAGATGCCCTTACCGGGCACTTCCGGAAGCACTCATCCCACGAGTCTCAGCCTTGCAGGTGATTCTCATCACGAGCTACCTGAGCTTTCTTGTGCTGAGCAGTGTGAAGGGGCTGCTGCCACTCCATGCCCTTCATCCTGCAATTTCCTGACTGCTCTAAGTCTCAGAGACACTGATCTTCCTTGGGCCTCCAGTCCTTATGACATGGATCAACTTATACAGTTATACGACTTACCTGGGGATGATGACCCCAGCAGTCTGGATCAGTACCTCTTCCCAGAGTGCTCCAGCTGGGGGACTGTGGCCGGCACTGATCACCATCATGAGGACGAACACAGCTACAATCCTGAGAAAGTTCCGTGATCCAAATTTTTTTTTAAATGGTTTTATTTATGTTTGGCTGTGCTGGGTCTCTGCTGCTGCGTGGGCTTTTCTCCAGTTGCAGGGGACGGGAGCCGCTCTCTAGTTGCGGTGCTCGGGCTTCTCTTGCTCTGGAGCACAGGCTCTAGGTGTGCAGGGCCCGTTGCGGCTCCCTTCTGTCCTCTAAGTGCCTCCTCAACCAAATTTCAGTATAAAGGGCAGTCATCAGGCATCTTTGGAGAAATAGCAGAAACTAGCTAGTTCTCCTAGTTTGTCCCAGTTGAGCTATCTCCATTAATATTATGTAAAAATACCTATTTTTCATGAGCCTCTTTGTCTTAAAAAAAAAAACAAAACAACAATTAGGGACCTCTGTAGTGATCCGAGGGTTAGGACTCCACACTTCCAATGCAGGGGACATGGGTTCAGTCTCTGGTTGGAGCACTAAGATCCCACATGCTGCATGGCACAGCTGAAAAAATAAACACCCAAATAACAACCCCCCCCCCAAAAATGCATTTAAGAGTGTGACATTAGCAATAGATTGGATGAGGAGGTCCCAGCACTTGTACCTGACAAAAAAAACCAATGATTTAATAATTATCCACTGATGAGAATAGCTCTGGGAGAGCTCTGGAGTTCAGTTACTACTCAGCAGGGTAGCAGGCACATGAAAGATGCTCAACATGGCTTATCATCTGGGGAATGCAAATCGAAACTGCAGTGAGGTGTCACCTCACCCCCAGTCAGCATGGCTGTCATCTGAAAGACCACAAGAAATGTTGGCGAGGACAGGGAGAAAAGGGGAGCCTTCAGACACAAACAAGAGCACATCCCCATGGGAAATGGAAGCCTTTTACCCATGTCACCACATAGCTTGCAGCCAAGACTGATCCCTGTGGCTGTGACCTCGCACTAGAGCAAACAAGAGCAGGCAGGCCTTGTCCACTTTCACCAAGGAGTACCAAGGAGCCCTGGGGCTGTCAGTGACACCAGAAGCTTTTGCCACTGAGGACTCCCCAAGTCTTCCCGCATGCGAATCCCAGCTGACGGAACTGTGAGGCATCCGTGCCTGAGCCTTCAAGAGCAGGAGCTGATGCTGCAGCTTCATCGAACACTGGCACTCACGTATGGTGCGAAAACCCATGTCGCTGATCAGAGGATGTGACTGCCTGTTGACCTGTGGGATGGACGTAGCCAGCGAGGGACTCCTCGCCCCATCTTCTGTCCTTTGCACGTCCATTCTGCCTGCATTTCCCATAGCAGGAGCTGTCACAAGAACGCAGTCTTGAGAGAGGAACATGTTGCTGAGACCACCTGGACTGAATACATGACTGAACCCAGTTAAGGCCGCCATATAAACATTTTAAGATTTGGTGGGTGGATGTGGAGACCTACTTGTCTTGTGTCCACCCAGGATGAGCTTTGTAATTAAGTTTCTTTGTTCATTTAAGCTGCCACCCACCAATCTGTTGTGATCTGCCTCTTTCTTCACTCTCTTCTGGGGACCAGTTTATGAATCATTAGGTCAGTACTAAGAAATGGAATGAATGAAATGGAACTCGATTAAAACTAAGGTGGTTAACAAAAAAACAACTAAGGTGTAATCCAGTACTACAAAGGTTGGGTGGGCCAAAAGGACTCCTCTACTGTCCCGTCAGCTCTGTTTTCTCTAGTTCAGAAAAAATTTAAAAGTCAAAGATGATAATGAGAAATCTGACCTGCCATCATTTTGAGCATAGGTTAGGCAGAGTGATCCAAATGAAGATTGACAAAGAGTCAGGGTCTCTTTGCTGAGGACCCAAAGCCTTTTTACACAACAGTGAGTAAAAAGGGTCAGTGGTGGAAAGAGAAGTTTCCAGGTCTCTGTGATGTGTGAGCCCCACCAGCTGGGATACCAGAACCCAGTGGTGAAATCCTGACATGAACTGTAATTAGACTGAGAACATAAACGTGAAGGGCTGATGGGATTACAGAAGGTGGAACATTTAAACAGGCAGTAGGTAAAGAAGTTGTGTCCCCTTTGCCTGAATGCTTTATGGGAAAGGATATGACCTCAGGACATGAAACACATACCCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCATGTCCGACTCTGTGCGACCCCATGGACTGCAGCCTGCCAGGCTTCTCCGTCCATGGGATTCTCCAGGCAAGAACTCTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGGAAAGTGAAAGTGAAGTTGCTCAGTTGTGTCCGACTCTCAGCGACCCCACCTAGTGTTAAAAAAGTAAAACTGGCAATCGAATCCTATTGGAGGCTACAGTTAAGAATGTAAGGTTTGGTTGAAATAGTGTGAAAGTTTGGAGATGAACAGTTACATTTCAACAGTCTTTATGTAAAGTGGTTCTGTTTCCTTTACCTGATTGTGTTATAGAGTGGACATTGTATCTGACTGGGAAATGGTACTCCTACCAAGTACCGTAAAACAGAGGGCACATACATTCGCCCTTCTACACTATTAGTTAAAAATGCTAAATAAGAATGAGTAACATTGCACGTCCCAGGGTGATTCATTGGAATAGAGAATTTCCGCTTGACAGGCAAGCTTGCTATTCCTTTAAAAAAATTTTTATTTGGCCACATTGGGTCATGTTGTGGCACAGGGGATATTTCGTGTGGTGCATGGACTCTAGTTTCAGCACTCTGGCTTAGTTGCTCCAGAGCATGTGGGATCTTAGTTCCTCAACCACGTACTGCAGCTGTGTCCCGTGCATTGCAAGGTGGAATCTTCACCACTGAACCACCAGGGAAGTCTCAAGCTTGCTATTCATATTAGCTGACTAATGGATACACTGGAAACTGTCCCTTTGACTAAAGGATTTGAAATAATCTTGGGACCCGAAATAGCCATGATATTTTGGATGATGTTTAAGAATTGCTCTAAGGGGAATGGCTGTACTTAGAAGAATGTGTAACAAAATGAAAATGGTTTATACAAGAACATGCTGCCTGGGGGATGCAAGGAGGAGGTATAATCAGGCAGCCTCTTTAACCCTGGGACTCACTTTGGAACCATGCGAGGACCCACTGAGTTAGGGACATCCCTGCATTTTGGTTTTACTGACTCATTGATGGTACCCAGAGAGAAGGCAATTGGCTTGGCTGTGTGGTCAGGCAGAGGGGCAATGGTTACCTGGCCTCTGAAAGGATACTGAGATGAGGCGTCATAGAAATCACTATGGGAATTTGAAGGGTGTATTAAAATAAGGCCCATCTATGCTCCCCAACTCTTACAGGTTTGCAAGATGTTTGGATTCAACGCGCCGATATCCGTGTGCTTGCTTCACCTCAGTCTGTGAAATGAGTGGGTCTGGAAGCACTGCTGTGCTGCAGAGATGGGCTGAACCTAGACCTGTTCGTCTTGCTCCATGTAAGACAAGCAAAGCCAACAAGAGCTGTCCATCTGCCAGCAAAGAGACTGAGACTGCAGGTGAAAATGTGGCCTTTCCCTGGGGGAAAAGCCCTGATCATAGCTGGAGCGCGAGAGGTGACTACACATGCTGGGAACAGGGATGGTTGCTAAGCAGAAAACCGTACTATAATTTATTATTATTTTTGATATTTACTTCCTTGACTGCACTGGGTCATAGTTGCAGCAACATGAGATCTTTGTCGAGGCGCATGGGCTTAATTGCCCCAAGGCATGTGGGATCTTAGTTCCTTGATCAGGGATTGAAACCACATCCCCTGCATTGCAAAGCGGGTTCTTTTTTTTGGCTGTGCTGGGTCTCGTTGCTTTGCGTAGGCTTTTCTCTAGTTGGGGCGAGTGGGAGCTGCTCTTCGTTGCAGTGCTTGGGTGTCTCATCGAGTCGGCTTTTCTGGTTGTGCAGCACAGGATCTAGACCCCCGGGCCTCCGTAGTTGAGGAGCATAGGCTCAGTGGTCGTGGCGCATGGGCTTAGTTGCTCCACAACGAGTGGGATCTTCCCGGACCAGGGATCAAACCCATGTCCCCTGCATTGCAAGGTGGACTCTCAGCCCCCGGACCACCAGGAAGTACAGGACTGAACTCTTAACCTGTGGGATCTGATGCTGTGTCCAGGTCCATCATGTCAGAACCGTGTTAAAATTGTAGAACTCCTAGCTGGTGTGTGAGAATTTCTTGGCATTGGGAAAACCCACACACATCTGGAGCCAGAAGTGAAGTATTGAAGTTCGAGGAAAAACAGGAGTTTTCTTTACATTCCTGTGTGTAGGAAACCCCAAAGAGTCAGAACCTCAGAAGGAATAAATTTAGTAAAGTTGCAGGATACAAAATCTACAGATATTAGGCACATCTCTATACACAAACCACAGATTATCCAGAAAGAATTTTAGAGAGCACTCCCATTCCCAACAGCAACAGAAATAAAATTCTTAAGAATGTACTTAACCAAACAGGTGAAAGACTTGTACACTGAAATTTATAAAAATCAGGAAATAGATTAAAATTGAATAAGGCCCAGTTAAATGGAAAGATGACCAGTATTCATGGATTGGAAGAATTAATATTGTTTATACTTGAATTATAAATATAAACAAGAATTAACTTGTTTATACTTCCCAAAGTGATCCACTCTCCAGAAGTCACCTCATGAACATAAAAGTCACTTTTATGGCTCATCTCAGGAAATGCCAAGGGTTTTATGCCAAGATCTTCGTGCCAGGAACAGGAACAAAGACCTCATATGTATTTCTTATTATAGATAACAGTATCACAATTTAAGTGCTCAGGTGCTTGGAAAAGAGTACAGAAGTTCAGACAAATCAGAAAATTGCAGAACAGGAATTCTGGGCTATAAGGAGAAGTTTTGAAGGAGACTACAGAGGAGGTAAGCTACAATTTTGGATCTTCCCTGTACAACATGTCTGTCCCGTCTTCCCCTTCAGAAACCAGCTGTTAATTGAGTTAGACTCACCCTACCTAAAGTTTGAGAGGCATGCTGAATTTGACCAGAACAAGAGTGAGCAAAAGCACATTGAAACGTCCGTGCATAATAGATGAAGAGAGGGAAAGACAGGGGAGAGTCAGAGTGGAGAGAGGGTCTCTTTCGGAATGTTGAGGAGGGGTGCGGGCAGGAGGGACTGAGACATGGAAAAGGACCCACCTGTTGGCCCAGTGGTTAAGACTTTGCCTTCCAGTGCAGGGGTGCAGGTTTGATCCCTGGTCAGAGACCTAAGATCCACATGCTTTTTGGCCAAAAAACCAAAACATAAAACAGAAGCAATACTGTAACAAACTCAGCACAGACTTTAAAATGGTCCCTATAAAAAAAAATCTTAAAAAAATAAAAGGAGAGAAATAGTAATAAAGGAGAGTATAAAAGACGGACGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTAGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTTGCTAGAGTTGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATACATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGTCTGGTGGCCTGCCGTCTATGGGGTCGCACAGAGTCGGACACAACTGAAGCAACTTAGCAGCAGCAGCAGCAGCAGCATAAAAGACGGAATAGAAACAGCTGGATTTATGGAGCAG TCONS_00083752 TCONS_00083754 s 3' 20738 TCONS_00083752 TCONS_00083754 s 3' 20738 EMBV3_30467 CTTAGATCTCCAGACGTGCCATGTGTTTTCATTGCCAAAAGAAGTCCAAGCAACTCCCTC Gene GeneID:514646|LPCAT2:XM_002694785:597_cdna Constitutive 0 NULL GeneID:514646 18 GENE LPCAT2 NULL lysophosphatidylcholine acyltransferase 2 EMBV3_21237 AGGGGAAATAAGAGGGTCTCCAAGCACTTTGCAGAGAACAGGCAGCTTGTAAATGGGACG Gene GeneID:514427|SLC27A4:NM_001075667:91_cdna Constitutive 0 NULL GeneID:514427 11 GENE SLC27A4 MGC140535 solute carrier family 27 (fatty acid transporter), member 4 EMBV3_30638 GTGGCTCATAGACTGCTTTTTTTTCCCCTTTACTCAAAGAAGAGTTCCAGATAATGTCTC Gene GeneID:100336882|LOC100336882:XM_002689868:8_cdna Constitutive 0 NULL GeneID:100336882 8 GENE LOC100336882 NULL hypothetical protein LOC100336882 EMBV3_18330 CAGACGAGATTAAAAAAACGTACCCTCCAGATGACCCAGACGGCCTTCATCAACTTGATG Variant GeneID:525941|SCG3:NM_001102097:77_cdna 478^693 1 EMBV3_08941 GeneID:525941 10 GENE SCG3 MGC166329 secretogranin III EMBV3_09500 TCTTCATACGTTGTAGGTGTGCTCCTTGCCCGAGTTGCTTCAGCTTAAAAGATTCCTCCT Gene GeneID:530360|ZNF407:XM_002697658:70_cdna Constitutive 0 NULL GeneID:530360 24 GENE ZNF407 NULL zinc finger protein 407 EMBV3_17970 CGTGAACCTGGAAGGGCTCCGGGATTCTCGATGTTGGCTGCATATTTATGCTCAAAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09153 CATGGGCGTCTTTGTCTCTATCAGCATCCCTGCTCTATCTCTCCCAGTCAAGTGCGTTCA Gene GeneID:505818|PPP1R13L:NM_001075224:133_cdna Constitutive 0 NULL GeneID:505818 18 GENE PPP1R13L MGC139923 protein phosphatase 1, regulatory (inhibitor) subunit 13 like EMBV3_14693 AAGCAGAATCTTATCCATCATGACTGCCATCCGGCTACGAGAATTTATTGACCGCCGCCC Gene GeneID:767994|C16H1orf100:NM_001077054:119_cdna Constitutive 0 NULL GeneID:767994 16 GENE C16H1orf100 C1orf100 MGC133669 chromosome 1 open reading frame 100 ortholog EMBV3_34047 AGTCTATCTGCACCATTACTAGCTTCCTCCATTGATTTGCCTCCAGGCTGTGGTCATGCC Gene BVV0102_202834 + 0 NULL GK000021.2:35267999-35415156 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121130 TCONS_00121138 TCONS_00121131 TCONS_00121139 TCONS_00121142 TCONS_00121135 TCONS_00121137 TCONS_00119317 TCONS_00121132 TCONS_00121136 TCONS_00121140 TCONS_00121134 TCONS_00121141 TCONS_00121133 2 XLOC_073359 XLOC_072870 Coding TCONS_00121142 XLOC_073359 Coding Coding STXBP6 21:35412323-35694647 j TSS90334 4069 1 TCONS_00121142_2 210 6 0.985608682254014 0.000718535202870521 0.000245477733489261 0.000275927735013799 0.000258951799847656 0.000362800494630715 0.000492810906039061 0.000203570029900188 0.000150531359400661 0.000514640561774869 5.67751315683525e-05 4.14304397017948e-05 6.50920268815541e-05 3.58490634640853e-05 0.000472711591086036 0.000157211612338484 0.00477088061104881 0.000887585745128959 0.000860715433753885 0.000208641546057868 0.000500942990388623 7.03377844391706e-05 0.00248586246105409 0.000158001511368998 0.00107024035361548 0.000182025227328427 0.000195643872440805 6.2702950017615e-05 0.000120426211438593 4.54981941603938e-18 2.46872191478834e-05 XM_005221969.1 STXBP6 PREDICTED: Bos taurus syntaxin binding protein 6 (amisyn) (STXBP6), 0.0 7220 100.00 0.983534037847137 XM_005267556.1 STXBP6 PREDICTED: Homo sapiens syntaxin binding protein 6 (amisyn) (STXBP6), transcript variant X1, mRNA. 0.0 3034 77.95 0.910788891619563 TCONS_00121142_2 sp|Q8R3T5|STXB6_MOUSE STXB6_MOUSE Syntaxin-binding protein 6; 2e-157 439 99.52 0.995238095238095 2 coding 0 0 0 0 -1.48169981533467 0.0226518507030075 -0.0632327737787473 0.361980446112216 CTGCCCCAGGGCCAGGGCGCTGGAGCTCGCCCACGCCGCACTGGGCATGCTCAGAGGCGGCCGCGGGGGCAGCCTCGCTTCGCAGGCGCTCGCACTCAGCGGCGGGCGGGCTCGCGGCTGCAGCTGGAGCTCCAGCGCCCGGAGTTGGAGTTGCCGGGAGTTTCCCCTCCAACCCCTCCCTCCTCGCGCGCGGCAGCAGGAGCCGGCGCGGGAGGCGCGAGCGGCGGCCAGCCAGCACCCGCGCAGGCAGAGCTCGTCCGGAGCCCGGAGCCCCGTACGGGGCAGTTCCCGGGGAGGAGCCTCGCGGGCTGGGACGCGTGCGGCGCTCTGGCACTGCCTGGGCACAAACCGCGCTGCAAGAAAACTCACTGCGAGCCCTGGTTACTTGGCTGACAATGAGTGCCAAGTCTGCGATCAGCAAGGAAATTTTTGCACCTCTTGATGAAAGGATGTTGGGAGCTGTCCAGGTCAAGAGGAGGACAAAGAAAAAGATTCCTTTCTTGGCAACTGGAGGCCAAGGCGAATATTTAACTTACATCTGCCTGTCAGTGACCAACAAGAAACCCACACAGGCATCCATTACGAAGGTCAAACAGTTTGAAGGCTCCACGTCATTTGTGCGGCGGTCACAGTGGATGCTCGAGCAGCTGCGCCAGGTTAACGGCATCGATCCTAATCGGGATTCTGCAGAGTTTGATTTGTTGTTTGAAAATGCCTTTGACCAGTGGGTAGCCAGCACAGCCTCAGAAAAATGTACCTTCTTCCAGATCCTCCACCACACCTGCCAGCGCTACCTCACAGACAGGAAGCCGGAGTTTATTAACTGCCAGTCCAAAATCATGGGAGGAAACAGCATCCTCCATTCAGCGGCTGACAGCGTGACCAGCGCCGTACAGAAAGCGAGCCAGGCCTTGAACGAGCGTGGGGAGCGGTTAGGCCGTGCGGAAGAGAAGACGGAGGACTTGAAGAACAGCGCCCAGCAGTTTGCGGAAACTGCACACAAGCTTGCCATGAAGCACAAATGTTGAGAAACTGCCTCTCCCAGAGACCTCTTAAGAGAAACTGAAGTTTGTTCAGCAGTTTTTACAAGAAACTCCGGACCTCCGCTTGCTTCTCCAGCCCTCAACCCCCACCAAAATATGGACATTTAGATTGTTTTTCCTTTTCAGATGTTAATATGAGAGAAAAGATGGTGTGTTTATATTAATACATTTCCCTAATAATCTTGCTAAGAAATGCTGCATAGTATCAGCTTCATTTTTTTCTGACTGTGTGTATGCGTGTGTTCGTATGTGTGTTTTTTTTAAGGGTTTTTTTTGGTAGTTTGAATATGAAATTTGGACCAAATAATATATTGAGCTAGGTCTAAGCTGTATTTTTTTTTTTCCTGATATTAAGCAGGAAGACATTTTAATGTGACATCAGATGCTATTGTTCCTGGCTGGAAATAAAAGTCAAGCAGGTTGGTTTCACTCAGGCTCTTAGCTACTCTTAATTTGAAGGTTAAGATTCTATATCCTGAGACATAAATCTGTATTATGGAAAACAATTGGATTTATCAGGAGAAACAGCAGTCTTTGATTTTGCTTTTTGTGTGGTAATTTTCTGCATGAGCCATCACCAGCATTCAAAAAAACAAATAATCACAGATAGAAATCTACTTTCTGAGCTACAGTTTAAATTCTTCCACTACTTGTTTCCAGGCTGATTATTTAGAATTACCGTATGAATGATAAAAAATTGAGATTAAAGACCTAAGTAAAAGCCTATTTAAAAACTAATGTGAATTCATGAACATTTCTTTGTCATTGTCCCAAATTATGGTAGCGGGTTTTGAAAAGAGCTTGGATTTTTATCAAGAATTGATTTGTCCAGATAAAGTTCTGTGTAAATGATAATGTGAAAAGATAATACATTTAAAGTCTTTTTTCTTTTCACAAAGACATACCTGTTTAGAGACACCCTCATGATGTCCTTAGGAAATGGCCTTCAGTTCTCAGTATCTGATTTTTGGAGGCTTTGATGTTGTTACTGCTATTTATTTAATGTAATTTGAAAGTGCAAGCTTCTTGACAAATTGCATTTCATGGCAATTGCAACTTGCCTCATCTGACATAGAACAGTATAGTCTTGAAGCCTTTACATTGCAGTCAGAATGAATGAAGTTGGTTCATTACAGCCCCTGATTTTGTATCACTCAACATGGACCCAGATTTTCAATCTGAGAGTTCGGTTTCTTAGAGGGTTAAAATGCTAAATATAAAAGCTGTGCTTTGTCTTTCTGAAACAAGGAAGCAAGCTGCACATCCCAGATACATTCTCAGCCTCCCGCTGTGATGCATTGATTTTTAAGCTGCCTGGATCATCAGGACCCTTTCTATTCCTTCCTACCTATTGAGCCGACTGAGGCCATGTGTATTATAGCTTCTACATAGCAGCACAGGATGACTTTGGGATTATTTATGCTGATTTAAATAGCTTAAATTCTCCTGCTAAAGCTTTCCCAGGGAGATAGAAAATTAGGCTATTGGTGGGGGAAATGATCTTAGTCAGTATGTGTCAAAAGGGAGATGAGATTTGCCAGAGAAGAATTTCTGAATCCTCTTAGAGAGATGATCCAGTTCAAGGAAACTCTCTGTAGAATTTATAGGGTAAACTATATAAGTTTACTATAATATTTTGTACTTTTCTTTTGGTGTCTTAAAACTTAAAAGCAGCAAGGAACTTATTATCTGGTGAGTACTATTAGAAGCATTTATAATTTCTAAGAAAAGCTGAAAATATCACACCAAATAGGTTTTCTTTGCAGACCTCCATTTAGTAAAAGCATGCGTGGGCACACATATACATCTTCCCAAATTGAATCCTAGCTTCAGAGATAGATAGTTGATATAAATAATTAGAAGAGTAAATCTCAAACCCCTGACAATCAGCCAAACGCAAAAATAAAATTTGTTGCCAAGTATTTTTTGTGAAGCTGCTTCTAAAGTAGCAGAGGGTGAGGTCATAAGCATACTGTGAAATGTGAGATTTTTTTTTTCCCTCTCTGGTAAACTTGTGAGAGTTATCCTTCATAAACATAAGTAGTCCACATCTTCCCCTCTTTGCTCACTCTCTGTTTATCCTTTTAAACTTCAGTCTTTTGGAAGACATCCTGATTGGAAGAAAGTCTATCTGCACCATTACTAGCTTCCTCCATTGATTTGCCTCCAGGCTGTGGTCATGCCCTTGACCTCCCTGTGTCCAAGTCCTGCCTAGGCCTCCACCCGCAGAGAGGGCCCCAGTCCCTTCTAGACCTCCTGACTTTGCAGAAAAGCAAGCCTTGTGATGATACACATGAGGTTCTTTGGGATACTTTTGTAGAAGGTGCTTCAATACAAAGTATTAATACAATCTAACCTAGAGGAAATTGCTAAAATGACTCACATTATGTGGTACCGATTCATTTGGGACCAATTCAGCGGCTTGCTAAAAGACATTTAATTTCTTTGTTTCGTTTCTGCACCTCACCACTGAGTTTTGGAAATACATTTCTGTGAAGGATTTCTTAGACTGTACTGACAACCAATAAAGAAGAGAGTCTTCCCAGTGTTCTCACTTCTTCCTGGATGTAGCTGGAGTATTCCTCCCTAGTACCGTTAGATACCTATGTACAGGAAGTAGTGATTCAGGTTAATGTTTCATATTAACGAATGTATTTGTAAAATGTAACAAGAGCAGTAGTTAACTTTTTCTAAGCTCTGAAAAAAAAAAATAAAGATTATGTGTTAGACTTAAAATTTCAGTGAAATCTGTCTTAATACTACTTTTGTGGCTAACAATTGTGCATTTATGTAAAAATACTTATACAGAATGCCCTCAATAAACAATATTAAAGATAGGTTTCGCTTTCAGTTTTTAGAATTGTAACACTGCTGATGTCTGTTGTACAGTTACTAATTCTTCAGAAGTTCTCTAAGATGTCACACATAATTTTTGTTCCTTTCAGAGATGAGTAACACACCTGCTCTGTGATTCATTATTACAGCAAACTCTAATTTTGTCATTAAATATTTTAACTGTGATGAAA EMBV3_31105 TATTTGACTCGAAACCAACACACTTTGAGCCAGCCTTTGACAGACGAACACCTCCACGCC Gene GeneID:540067|EPM2AIP1:XM_002696939:504_cdna Constitutive 0 NULL GeneID:540067 22 GENE EPM2AIP1 NULL EPM2A (laforin) interacting protein 1 EMBV3_33978 ACACAGTGCTTCTTCTTTGACATATTGTTGACTCGCTGAAGGGTAGTTTGTCAACAAGGG Gene BVV0102_221761 + 0 NULL GK000030.2:140517281-140973701 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248544 TCONS_00248545 TCONS_00248547 TCONS_00248546 TCONS_00248543 1 XLOC_151630 NonCoding TCONS_00248543 XLOC_151630 NonCoding NonCoding - X:140720548-140865498 - TSS185859 3993 1 TCONS_00248543_9 146 0.383420986726772 4 0.972479975715597 0.000454753727001243 0.000146244500512006 2.7584574994879e-15 0.000426465497304654 0.00057827920269322 0.000363977651268071 0.000164430487327695 0.000184867765117008 5.62796204431511e-06 1.73509611445036e-11 1.7994059349081e-10 0 9.26602901915869e-05 0.0002775504247017 1.28892904484363e-08 6.59760186133906e-06 0 1.88341045436625e-05 1.55566112780685e-101 0.000284974816391025 1.50917308020591e-07 0 6.88633835732122e-06 0.00115457737296566 0.000619078530575888 0.000875822112097805 0.000227009495111142 0 1.37010561802506e-11 0 XM_870951.6 CREG2 PREDICTED: Bos taurus cellular repressor of E1A-stimulated genes 2 (CREG2), transcript variant X2, mRNA. 8e-60 237 87.13 0.0500876533934385 0 noncoding 0 0 0 0 0.00688196714004732 0.964548476037379 0.0066127355075266 0.914260067003975 GGAGAGAGAGACAGTAAAGTCTTCAGCAATTAGAATGTCAGCTTTAAGAGGAGGAAGGGAGAAGGACCTGGCAGTGAGCTGACACCTACCAATGCAACCCAGATCTGGAAGCTGGCAGAGGAGAGGCCGAGACCCGGGTGGTGAGGAACCTAAGACCTCGTGACAGGTGTGTAAATGGTGGAGCCAGATGAAACCCAGGTCATTCGATCCCTAAGCATAAACTTGACCCAGGGTGAATATTCAAAAGATGGAACAACCACCCAGCAGGAGAGGCCGGACCATCTCAGAGCAGCAGTAAGACTGCCTCACCCACCGTGTCCCTCCCTGCTGCATACGCTCCAAGTCTTCCAGTCGTTGCCCTATTGGAATTATTGGCTAAAAGCTGGGAGGTTGGCAACAGAGGCGCTGAACTAGAATGATTTCATCCCCCTCCCCCCAAATTGGCAACTTTTGGAGACATTTTTGCTTGTCACCAGGATGGGGCGGTACTGGCAGCTAGCAGGTAGAGATCCATGTGCGTGTGCACATGTGCTCTGTTGTGCCCAGCTCTTGGTGACCCAGAGACTGCAGCCCGCCAGGTTCCTCTGTCCATGGAATTCTTCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGAATCTTCCCGGCCCAGGGATTGAACACATATCTCTAAGGTCTTCTACATCGGCAGGCTGATTTTTTACCACCGCACCACCTGGAAAGCCAGGTAGAGACCAGGGATGCGGCTAAACTTCTTGCAGTGCACACAGGACAGCTCACCAACAATGCCAAAGAGAGTCTAGTCCCAAATGCCGATACGGAGGAGTCTGAGAAAACCCCAGCATAAAGTATCACGTGTTTAAGATGAAAACGTCCGGGACGCTGCCTCCAACTCAACTGGAAAGTTCTGGAGCTGACAGCTGGCCCCTCTGCATTAATGGACGCCTTTGCTTCATTCAGCTGCCCCAAGGGAGGACCAGCTACTGCCTGCATGTGAACAGACAGATGAAGCAAAGACAATCTGGGCTGAAAACCTGCGTGCCGCCACCAAGTAAGCCAGCATAACTGACTGCTTTGAGTTTAGACAACGTTGAGCAGATCAGACCTGTAGTAAAGAATAAAACAGCTAAAAACCAAAGCTGTTCGTGCTGGGGGCTTGTGTTTCCCAATGTCCCAGGGAACAGCCTGTGAAAGCCTTGCACCGCCTGGCCTGTACTCAGCTGCCCAGAGAATTTGCAGACAACAAAGGCCTCTGATTTCTGTCCCCAGGCTGTTAGCTTTAAGTGAAACCCGGGTAAGAAGGTTCTCTTTGGTGACTCTTGACAACTAAAGGACGCTGTAAGCAATGTGTTTTGATCCCTCAGCAAAACTATGAAATGTTTTCTCTTCTGTGGAAATATCTTTTCCAATGACATTTCAACAAATGAACAAGGGCAACTGCAGAATGTGTATTTTCTTTCCACCTTAAAACAAATGCAGAAACAACTGTTGTTCTTTTCCACTTCATTAGGCTAAACAGACTTGATAGAAGACTGGCCTTTCCTGCTACTGAGTAATCCCCAGTAATATGAATACCGCCACCAAAGAACTAATAGTTGTTGCTAATTATCTCCCTCAATTAGCTTTCCTGTCAACCGTCTTTAACTTGGGTTTCCCCTGGTGGGTAGGAAACACTACACAGTGTGGCTAACCAGAGGGGCCCTCTGCGACCCCCCGCCCCCACCAATCACTTGATAGGCAAAGTCCAGTCCTATCTTTGGCCAACAGGTTTTAGGAACCCCACAGTGAGAAGGTAGGGTGCAGGGCAAAGAGGGGGCAGAGTTTTGGCAGAAGACTCCATGACAGACACAAAATGGATGCTCGTAGGAGTCAGTTCTTGGGGAGAGGGCAGGTTAGGGTGTTGAATACAGCACCCTCTCTTTAGGCTAGTAGTTCTCAACTCAAGGAAAATACAGCAGTTATTGCAAGGAGTCCAAGACAGTGCTCACAAGACCCAAAGTCCCCGATGGCTTTCAATAAGGCATTTTTAGAGGCCAGGTGAGGGAGGGATATCCCACAGTGTGTAATCAGCTTGTGAGCAGTTCTCTGATCAGTTGATAGTGAGGTAACAGGGCGGTGTCACAGGGGTTAACATTATCAGACCTTAGGCTCCAGGGGGCTTCCATGGTGGCTCAGTGGTAAAGAATCCACCTGCGTTGCAGGAGACATGGGTTTGATCCCTGGGTCAAGAAGATCCCCTGGGGAAGGAAATGGCAACCCACTCCGGTATTCTTGCCTAAAATAATTCCATGGACAGAGGAGCCTGGAGGGCTATAGTCCATGGGGTTGCAAAGAATTGGACGTGACTGAAGCGACTTAGCATGCGCACAGGTTCTTGCCTGAAAAACAGCTCAGAAAATGTGCATCAGATACAGTAATCTAAGTACTCCAGAGAGGAGCTAAAGCAGAGGATACGGGGGAGGGGTCTGTCTCGTGAATGCCCCATGGGGTCCTGCTGGGTTACAGACAGAGACATTTTCATCACGCCAGAAAGCTGTTTTGGACAGCACTATTTAACCATAGAATTTATAGAGCCATTCTCATGCTTAAAAACCACTGTTCTTGCCCCACTGCCTCTAGGATCAATTTCCACCTTGTTAGCCTGAGGTGCTTTGCTATCCAAGCCCAGCTGTCTCTTCGGAACCTCTTCTCCCCCTCAGCCTCCTCTGTCATAGGAGAGACTGCTGCACTTGTCTCCCTCCAGACCTTTGCCCCTGTTGTTTTCTTTGCCATAACTGCCCTTTCTCTACCTTCTTCAGTTACAAAACTCATAGTTGATCCTTGGGTTCGGTACAAACATCCCTCCAACACCCCCTTACCAGTCCAGCCCTCTGGAGCCCAAATAACTGCTCCATTCCCTGTTGCCCCTCAACAGTGATTACCTGTCTGTCACATACTTGCCACCTATCATAAGTGGCTATTTCCATGGGTTTCTCCTGTGCCTAACTCTGAGCTCCTTAAGGTTGAGGGTGGCCTCGTTCCTCTTTGCATCACCAGAGGCTCGCACAAGGTGGGCAGTCCCATTGCAAATAAGACAGTTCATCAGCTAGCTAATGAGTGAAGTAGCCCAGATAGACACATTTCACACCACAGAATTCCAACAACCCACACGTCCATGAAATCGATGGCATCTCCTTGGGGTAAGATCATTTGCCTTTTATTTGCAGAGCAGAATGCATATATCTGGTGCCTAGAAGGCTCTTTATTAGGATCAAAGATAAATGCATTTAAAGGTTATATCTGATGGGTTGATAGTCACAAAGAATGAGAAAGAATATAAAGAGGAAATTTATTGTTCTCTTACATGGATTTCATCTCTTGTGTCATTTAAACAGAAATATCTTGAGAGAAAGAACATTTAAACAGAGGAAAAAACAGCAAAGAACCAGCTTAGCATTATTGCTACACAGTGCTTCTTCTTTGACATATTGTTGACTCGCTGAAGGGTAGTTTGTCAACAAGGGTAGAGTTGAATCTTACACTTTCCTTTTCTTTCCCTTGGCACATAACACAGTGTGCAGCCCAGAGCTGCGCTCAGCTCACCCACCTCCTCTCAGAAGCCTTCCTTGATCCCCCCCGACTGGTTTTACCCTCCTTTAGTGATCCGTCAGCACCATGCACACTACTTCATAATGCACTTACCACATTGTATTACTTACTGTCTCCTCAACGAGATCATGTTTTTCCTGAGATTAGAAACTATATCTTATTCTTCTTTGCATCTTCATGGCCCATTAGAGTGACTGGCACCACAATTAAAACTTTGTTCAATAAATAAACCTTGGGCAGTGGGAAGTCCAGGCTTTAATGGAGAACAACAGCCTTTCTTGGCAATGGTAAACCGCAAGAACTTTTAGAATTTGGAATGAAAAGTGGGGAAATGTGTCTATGTATGAATCTATTTGGATGAAAAAAAGAAACCTTTGGTGTTATGGGGCCTGAGTA TCONS_00248555 TCONS_00248556 s 3' 249431 TCONS_00248555 TCONS_00248556 s 3' 108204 EMBV3_21602 ATTGCAAGACACACTCCTTCTCAATCGTAGGAACCCTGACCTCAGACCCGTACGACTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09494 CCGCAGGTGGCTACCCACCAGGTGCACCAGGCGGCCAACATGTCCGGGACGTTTGGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34203 CCAGACACAGCGCTTTCGGCTGGACAACTTGCCTTTCGGGGGGTGCAGCGGGCGCCGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00540 TACCCAGGCCATGAATCCTTTTAGGCCAAGGATCATGTTAGAATCTGACACGTGGCACAG Gene BVV0102_165350 + 0 NULL GK000011.2:67590532-67684389 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15768 ACTTCATGTCATTTACTGTTGGTCCTGCCCTCTCCAGCTGCTTCCTTGAGAAGATACGTC Gene GeneID:518976|SLC31A1:NM_001100381:32_cdna UTR3_Alt 2 NULL GeneID:518976 8 GENE SLC31A1 NULL solute carrier family 31 (copper transporters), member 1 EMBV3_35621 GTTTGGCCGTTGGAACAGTTCTTCTAATTGTATTTCCTGGCAGAAGGAATTGTCAGTGGC Variant GeneID:614139|ELP4:NM_001038684:53_cdna 295^335 1 EMBV3_38733 GeneID:614139 15 GENE ELP4 MGC133896 elongation protein 4 homolog (S. cerevisiae) EMBV3_03258 CTGTCCCTGCGATGGGAAGCTACCTTTGCTGTGGTCGCCCCGACAAATTTCCTAGCTTGC Gene GeneID:617229|DNHD1:XM_002693171:125_cdna Constitutive 0 NULL GeneID:617229 15 GENE DNHD1 CCDC35 DNHD1L dynein heavy chain domain 1 EMBV3_38475 GACGTCCCACCAACAAATCCCAGTCTCTGACCAATGCCTTCAACCTTCCAGAGCCAGCCC Gene GeneID:100336477|LOC100336477:XM_002700088:191_cdna Constitutive 0 NULL GeneID:100336477 X GENE LOC100336477 NULL synapsin-1-like EMBV3_33109 CCTGAGGCGTGGCTGAGAATTGGACTTGAGAAGACTGGCTTGAGTTAGATCCAGAATCAT Gene GeneID:510194|HP1BP3:NM_001075436:120_cdna UTR3_Alt 2 NULL GeneID:510194 2 GENE HP1BP3 MGC142335 heterochromatin protein 1, binding protein 3 EMBV3_02623 GCACTGACTCCAAGAGCCTAGACTACCAGAGAACTAACCCTCGGGAGGATCAAATAGTGA Gene BVT0102_215187 + 0 NULL GK000005.2:6603201-7104608 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00197120 TCONS_00079987 TCONS_00107386 TCONS_00161781 TCONS_00021091 TCONS_00062807 TCONS_00079953 TCONS_00073490 TCONS_00032631 TCONS_00177001 TCONS_00238367 TCONS_00110708 TCONS_00109886 TCONS_00253822 TCONS_00254256 15 XLOC_118783 XLOC_048871 XLOC_063296 XLOC_098667 XLOC_011764 XLOC_037534 XLOC_048837 XLOC_045255 XLOC_018871 XLOC_106775 XLOC_145034 XLOC_066610 XLOC_065790 XLOC_156760 XLOC_157190 NonCoding TCONS_00197120 XLOC_118783 NonCoding NonCoding - 5:6727392-6728576 - TSS146688 1184 1 TCONS_00197120_2 126 0.776182432432432 1 0 0.000436669090511541 0.00169737021799165 0.000132869995443372 2.10409717675044e-05 0.00011675756750973 3.62539778513894e-05 2.95526260475656e-05 0.000809277820680692 0.000113287410944695 0 0 0 2.42338001102919e-05 3.972967414088e-06 5.01393447798173e-05 0 0 0 0.000709623817845661 0.000280071177135137 2.56396015545742e-06 0 0 7.07966115196088e-06 0.00124154723677618 0.000652577905893721 0.000250729232814868 0 0 0 NM_001046525.1 RNF41 Bos taurus ring finger protein 41 (RNF41), mRNA. 7e-80 302 88.79 0.195101351351351 NM_005785.3 RNF41 Homo sapiens ring finger protein 41 (RNF41), transcript variant 1, 2e-67 260 87.26 0.178209459459459 0 noncoding 0 0 0 0 -0.810992041684444 0.0432395895262488 0.007885846425618 0.869762618703437 TTGATTATTTCCTTTTCCATGTTGGGGAAATTTTCAACTATAATCTCTTCAAAAATTTTCTCATACCCTTTCTTTTTCTCTTCTTCAGGGACCCCTATAATTTGAATGTTGGTGCATTTGATATGGTCCCAGACGTCTCTGGGACTATCCTCAGTTCTTTTCATTCTTTTTACTTTATTCTGCTCTTCAGAAGTTATTTCCTCTATTTTATCTTTCAGCTCAGTGATTCATTCTTCTCCTTCAGATATTCTGCTCTTGATTCCTTCTAGAGTATTTTTAATTTCAATAATTGTGTTGTTCGTCTCTGTGTGTTTATTCTTTAATTCATCTAGGTCTTTGTTAATTGAGTCTTGCTTTTTTCCCATTTTGTTTTCAAGGGTTTTGATCATCTTTACTATCATTATTCTGAATTCTTTTTCAGGTAGCTTACCTATTTCTTCTTCATTTATTTGGACTTCTGTGTTTCTAGTTCCTTCATTTGTGTAGTATTTCTCTGCCTTTTCATTATTTTTTTTTAACTTATTGTGTTTGAGGAGTCATTTTCCAAGGTTTCAAGTTTGAATTCCTTCTTCCTTTTGGTTTCTGCCCTCCTAAGGTTAGTCCTGTAGTTTATGGAAGCTTCATATAGGGTGAGATTTATGTGGGGTTTTTGTTGCTGTTGTTTTTCCTCTGATGGGCAAGGCTGAGGGAGGTGGTAGTCCTGTCTGCTAATGACTGGGTTTGTGTTTTTTGTCTCTTTGTTGTTTAGATGAGGCGTCCTGCGCAGGGTGCTAGTGCTGGTTGGGTGATGCCGGGTCTTGTATCCAAGTGGTTTCCTTTGTGTGAGTTCTCACTATTTGATCCTCCCGAGGGTTAGTTCTCTGGTAGTCTAGGCTCTTGGAGTCAGTGCTCCCACTCCAAAGGCTCACGGCTTGACCTCTCCCAAGTATTGGGAAGCCGGTTCCTTGTTCACAAGGCTCCAACCCCCTGGTGCTGCCACTCAGTGTTACTCAGGAGACACTCCCAGTAACCCATTTTGTTGGCTCTTCTCTGACTGAGTCTTCCTTCCTAGTGACAAGCTCCATTGCCAAGGGGATGGATGTGATGTCACAATCAGGAGCACTCGCCCTGGAAGTGGTCTGGACTCTCCGTACCCACTGCAACCAAGAGACAGCCTGGGTGCCGTGTCCCAGCCTTTCCTGGGA TCONS_00190817 . 5' 48405 TCONS_00190817 . 5' 48405 EMBV3_18203 ACTAGACAAGAATTTGCTGGAAATCAGTGGACCGGAAACAGTCCCTCTACCGAGTGTTCC Gene GeneID:616164|CHMP4B:NM_001128506:1306_cdna UTR3_Alt 2 NULL GeneID:616164 13 GENE CHMP4B NULL chromatin modifying protein 4B EMBV3_38565 CTGTTGCTGTTTTACAGATGAAGCACCAGGGCTCTTTGAAGGGACTGCTGAGGTCCAGGA Gene GeneID:768207|SS18L1:NM_001078095:1378_cdna UTR3_Alt 2 NULL GeneID:768207 13 GENE SS18L1 KIAA0693 MGC139314 synovial sarcoma translocation gene on chromosome 18-like 1 EMBV3_06931 GCTCAGAGTCCTAACTATGGACCACCGGGGAATTCACTGAGCTGTTCTCTCATGTAAAAA Gene BVT0102_245600 + 0 NULL GK000023.2:16571559-16579596 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08548 ATCTCACAGGACATGACTTGCAAAGTAGAGTGGTACACTAAAACAGCTGGCGTACCGGGG Gene GeneID:514745|DHCR7:NM_001014927:278_cdna Constitutive 0 NULL GeneID:514745 29 GENE DHCR7 NULL 7-dehydrocholesterol reductase EMBV3_03080 CTCGAACTTTCTTACTGGCCTGAGAGCTTTAGGGCTCCTGGGGTCACGATGTCAGAGAAA Gene GeneID:767981|SHFM1:NM_001113317:71_cdna Constitutive 0 NULL GeneID:767981 4 GENE SHFM1 MGC128587 split hand/foot malformation (ectrodactyly) type 1 EMBV3_09458 AGCCTCCTCTGCCCCCACCCCCAATCAAGACCACCGTTCCTCACGGTCACTATTTATTCT Gene GeneID:515682|TP53I11:NM_001075725:66_cdna Constitutive 0 NULL GeneID:515682 15 GENE TP53I11 MGC140699 tumor protein p53 inducible protein 11 EMBV3_40460 TAAACGTCAACATTCCGACAAGTGGGGCTGAGATTGGAGGTGCATTTGGAGGAGAGAAGC Gene GeneID:507477|ALDH7A1:NM_001045969:31_cdna UTR3_Alt 2 NULL GeneID:507477 7 GENE ALDH7A1 MGC128050 aldehyde dehydrogenase 7 family, member A1 EMBV3_20432 AGGCCTGATGGATGGCAAAGGCGGTGGCAAAGACGTGTCTGCTCAGGCCACGGGCAAGAA Gene GeneID:510933|AARS:NM_001101075:94_cdna Constitutive 1 NULL GeneID:510933 18 GENE AARS NULL alanyl-tRNA synthetase EMBV3_11640 GGGGCACTTTAGAAAAGATAATTCTGGTCGCTTTATGGAGAAGGCTTGGGGAAATACAAG Gene BVT0102_079195 + 0 NULL GK000005.2:7675750-8422547 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07718 ACCAGCCCTGCTTACTCCACACATTAGGGAACTAAAACCGAGCACAATGTCCCTGCAGCT Gene BVT0102_024027 - 1 EMBV3_04194 GK000002.2:69917271-69928636 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105508 TCONS_00105504 TCONS_00105509 TCONS_00105507 TCONS_00105503 TCONS_00105505 TCONS_00105506 1 XLOC_062583 Coding TCONS_00105509 XLOC_062583 Coding Coding CCDC93 2:69924502-70029582 = TSS77838 6891 1 TCONS_00105509_5 631 0.0789435495573937 24 0.934649168720677 0.000251923894449239 0.000570112484091296 0.000225788868671294 0.000172680890774482 0.000133981688435238 1.13276580396052e-06 2.61361152226466e-09 5.93324030104713e-08 0.00068242661995488 2.54201313041302e-09 2.79455640874179e-12 4.28078602477944e-24 2.32203126452622e-09 1.8861095980715e-08 3.7986477692936e-08 0.0003070071768539 6.79394951632214e-09 0.00031487242087952 5.34898087440715e-10 1.04932734834094e-09 8.37128759413644e-09 1.36963077994095e-05 1.26734122377631e-08 1.97337620484566e-10 4.63589942952905e-07 0.000420639872898794 0.000342265738801542 2.36010801420754e-18 2.75304460940136e-05 4.33989135104578e-09 XM_005202544.1 CCDC93 PREDICTED: Bos taurus coiled-coil domain containing 93 (CCDC93), 0.0 1.211e+04 99.94 0.975910608039472 NM_019044.4 CCDC93 Homo sapiens coiled-coil domain containing 93 (CCDC93), mRNA. 0.0 3048 85.68 0.381657234073429 TCONS_00105509_5 sp|Q567U6|CCD93_HUMAN CCD93_HUMAN Coiled-coil domain-containing protein 93; 0.0 1207 93.66 0.998415213946117 1 coding 1 1 1 1 -0.196378610231296 0.275002424049716 0.0236917570226449 0.618956526338214 AGGCGCAGTCGCGCAACACTCCGGCCCCAGCGCGCATGCTCCACCGAGCTGCAGCGCTCCAGGCTCCCGGCGGCGGCGGAGGAAGTTTCCGCTCTGCACTCCACCCCGGTAGCAGCTTCGGGGCCGGGGACAGCTTCCTCCGGACGCTCGGCGGGCTTCGCTGCCGCCTCAGGGCGGTCCGACGGGATCATGGGGTTGTCAAAGGGGCCGGAAGGCCAGGGTCTCCCGGAGGTAGAAACAAGAGAAGATGAAGAGCAGAATGTCAAGTTGACTGAAATTCTGGAGCTCTTGGTTGCAGCTGGGTATTTCAGGGCAAGAATTAAAGGCTTATCACCTTTTGACAAGGTGGTGGGAGGAATGACCTGGTGCATCACCACTTGCAACTTTGATGTGGATGTTGATTTACTCTTTCAGGAGAACTCTACAATAGGTCAGAAAATAGCTCTATCGGAAAAAATCGTCTCCGTCCTGCCAAGAATGAAATGTCCACACCAGCTGGAGCCCCACCAGATCCAGGGGATGGATTTTATTCACATATTTCCTGTTGTCCAGTGGCTGGTGAAGCGAGCTATAGAAACAAAAGAAGAGATGGGTGACTACATCCGCTCCTACTCCATATCCCAGTTCCAGAAAACCTACAGTCTGCCTGAGGATGATGACTTCATGAAGAGGAAAGAAAAGGCCATCAGGACAGTTGTTGACCTCTCTGATGCTTACAAACCTCGTCGGAAATACAAACGCCAGCAGGGAGCAGAGGAGCTGCTAGATGAAGAGTCGCGGATCCATGCCACGCTTTTGGAATATGGCCGGAGATATGGATTTAGCCGCCAGAGCAAAACAGAAAAGGCTGAGGACAAGAAAACGGCACTTCCGACGGGGCTGTTGACTGCAGAAAAAGCTGATGCCCACGAGGAGGATGAGCTTCAAGCTGCTGAAGAACAGCGTATTCAGTCCTTGATGACCAAGATGACCGCCATGGCACATGAGGAGAGCCGGCCGACCGCAAGCTCCGTGGGCCAGATCGTGGGCCTATGCTCTGCCGAGATCAAGCAGATTGTGTCTGAGTATGCAGAAAAGCAGTCTGAACTGTCAGCTGAAGAAAGTCCAGAAAAGTTAGGAATCTCCCAACTACATCGGCGAAAAGTCATTTCCTTGAACAAGCAGATTCTGCAGAAGACCAAACAACTGGAAGAGCTTCAGGCAAGTCATACTGACCTACAAGCCAAATACGAAGGAAAAAAGAAAACCCTGACAGAGCTCAAGGGTCACAGTGAGAAACTGGACAAAGAGCAGACAGCTCTCGAGAAGATAGAGGCCAAAGCTGATCCGAGCATCCTGCAGAACTTGAGAGCCCTTGTAGCCATGAATGAAAATCTGAAAAGTCAGGAACAGGAGTTTAAAGCACATTGTCGAGAGGAGATGGCACGGCTGCAGCAGGAAATCGAAAGCCTGAAGGCTGAGAGGGCGCCAGGCAGAGATAAAAAGACCCTCTCTGGGGGAGAGTCACATGGTGCCTTAACCTCTGCGATGACGCACAATGAAGACCTAGACAGACGGTATAACATGGAGAAAGAGAAACTTTACAAGATCCGTCTACTACAGGCTCGAAGAAATCGAGAAATAGCAATTTTGCATCGCAAGATTGATGAAGTGCCCAGCCGAGCCGAGCTAATACAGTATCAGAAGAGATTTATTGAACTCTACCGCCAGATTTCGGCAGTGCACAAAGAAACCAAGCAGTTCTTCACTTTATATAATACCCTGGATGACAAAAAGGTTTATTTGGAAAAAGAGATCAGCCTGCTGAACTCCATTCATGAGAACTTCTCACAAGCCATGGCCTCCCCTGCTTCCCGGGACCAGTTTTTACGTCAGATGGAACAGATTGTAGAAGGAATTAAGCAAAGTCGAATGAAGATGGAGAAGAAGAAACAAGAAAACAAGATGAGGAGAGACCAGCTGAACGACCAGTACTTGGAATTGTTAGAAAAACAGAGGCTGTACTTTAAGACCGTGAAAGAGTTCAAGGAGGAAGGCCGCAAGAACGAGATGTTGCTGTCCAAAGTGAAAGCCAAGGCCTCTTGAACATTCCCAGACATCATTGCACATCATTGATGTCTTCGTCTAAACGCCATGTATCAGCTCCGAGATGGTGAAATGGTTCTGGACACTGCAGCAGAGATGTAGGTGTGATGATCTCAACACGGGATATTTCCTTCCTCCTCTTTGCTCACATTGCATCTCCATGGTGGCTGTTGTCTATGGGATCGGACGGTGCAGACATTGTGGCTTGGATAACACCCATCCTCCAGTGAAGAAATGTGGGCAGTGTCTGTTCTCTGTGTCGATTCTACTTTTATTTCTCCAGTAACATTGCACATATGAAGGTACCTGTATTTGAATGGACTCTGAATAAAGAGGAATTCATTTGTTCAGTAATGTTAATTGAGCAGCTGCTGAGGAGGAAGCACTGAGCAGGAGGACACAGACCCTGCACCCAGGCTTCCAGCACGTGGCCCCAGAGCTTGATCACGGGGACTTTTCTTTTCTTAGTAAACAAGGCTTTTAGCTGAACGACCAGCCCATGTGAATATTGGTCACTTGGGCCTCTCACTTGCCGTGATGCCTTTTGTTCCTGGTCCCTCGGGGGCTGCTCAGCAACCTTAATGGTGTAGCAACTAGAATGAAAACTCAGTGTCTGCCCTTGGCTTCATCACACTCACCCAAGTTCATCTCACCAAAAAAAAAAAAAAAAAAGACCTCAGCTTGGCACGTAAGAATGACACCTCACCGCTCCCTGCTCTCCTGTGAGTCTCAGCCAGTCTGTGGGTGGTCTTGTGCATCCTCACTAGGAGTACATCACATGCTCCCTGCTGTGCATAGGTCAGGGCTGGACCCAGAGGCAGGCTCGCCCACAGTCACCCCCGTCCAGGCCAGTGTGTAAATCCTGGAGGGACCGGCCTTGAGCAGGTGCTGAGGGTGTCCGAGCAGGAAGAGCAGCCAGGTGTGCAGAGATCCAGGAGTTTTCACGGAGCCAGCTGGGTTGGGCTGGATCCGAAGGAGGAATCACAGTTGAATAGAGATTAGTGGAAAAGCCATTTTGGATAAAGTACAGATGTGATTAAAACTCAAAGAGTGCAGGGAGAGTATAAGGCATGCTTGTTGGGAGAGGGGTGGGTGGCCAGTCTCTGCAGGGGGCTTTAGAGACTAGTCCGGGAAGGTGGGCAGAGACTCACCCTTTGCAGAGCCTTGAAGGAAAGACAGAGGGCTTTACGGTTTCTCCCGGAAGGAGTCCATCCAAACAGCCCCTTCTGCCCCGGCCCTCAGGAATCGCTCAGGGTCAGTGAACCCAGCATGAGCAAGGCTTGCACATCATTCCACACAAGCCTTGCAGGTACCAGTCAGCAGGTTTGGGCTATGAAACATAAAAGCTTAAACGTGCAGTGAGCATGCTGCGTGCAGCTGCAGGGACATTGTGCTCGGTTTTAGTTCCCTAATGTGTGGAGTAAGCAGGGCTGGTGTGTACAGACTTAAAGAATCTCATGCTGGATCAATGACCCTTGGCTTCTGTGCTGGTCCAGCAAGGCCCGCCCAGTGAGGAGGCTGCTCCCCGTGCCCCCACGTGCTGATGGCACTGTTCCTGATCATGTACTTCTCCGCCTGGGTGGGTGCTGGTAGCCTGTGGATTTTGAAAGGACTCAGTGAGGCTGAAGCCAGTGGTTGCCAGAGTGCAGGTAGAGCTCCAGGGGCAAGGGAAGGTGGGGACGGTAAAACTGTAAACTATCTCAGGTTCAGGAAAACACTTTGGTGATCTTGCTGAGAAGCTCACAGGCCTAACAACTTGTGAGCAGGTAGACTATTTGTGTGTTGTCCCCAGGTTGTGGGAGGAGAAATGGGTTATCCTGGGGATCATGGTGGCACCCCCTCTCTGGATGACTGAAGAAAGTTGGGCATGGCTAATCCAGAGGAACTGATGCGTCTTCTGGAAGTGGGGGTATTGACTTTGGGCTGTGTTTCCACAGAGTTTCATTCGGTTTTGGTATAGGGAGGTATCAGGAGATGATGTTTCCATTTTTTAGTCCCTTAGGACTAAGGGATAAGGCCTGAAAAAGATAATAAATCCGTTTCTGTTCCTTGAACATATCTTGAATTAAACTGCAGAAGCCAGTCTTGAGAATTCTGTTTGCTACAGATAACCCACAGCACGGATAGTGCCTTTGTGAGTAAAGAGGACGTTAAATGTGCTTTATATAGTCAGGCCTCAGAGGTCAGGGGGCCTCCCAGGACCCATTCTGTATGCGCAGAGGATGGCTGGCTGCTCTGCTGAGCCCACAGGCTTTTCTGGAGATGAAAAATACATCACAGTTGTAAAACATATGCTACCAGGAGAAGGAGATTTCCCCAGGAGCAGTCTGTCCTCCCTGTTCAGTCAGGGCAGTGAGCTTGCTGGCAGCTGGTGCCTGGGATTCTCAGGAAGCCCCTGGGCTGGGCCCCCATTCCATGTGCACCTTAGGGAGTCAGAGCCGCTGTGAGCAGGACAGACTGACGACCTCCAGGCACCTGAGAAGACACTCGGGTTGCGTTTGTTACTGTCCTTGGCCTGGATTCAGGCTCCTAGGTCACTGCTCAGCTAATTGCACCAAGGGAGGTGCCGAGGTTACTCGTCAGGAGCCTGAGTGGGCACAGCCCAAGTGCGTCAGGCCTAAGCTCTCATTAGAGTCTGCAGGATGTGGTTTTAACTGGGTTCATTGCCCGTGTTCTGTGGAGAGCTGGCTGTCCTGCCAGCAAAACCAGAAGGCAGAGGGGCTGGTAGACAGGAGACCTTTCCCAGGCTGAGGATTCACTCCCTGACAATCCCTGCAGCTCCTGGGCCTCCTGAAACCAGGCGCAGGAGACAGGGGGGACCTCGAGCTGTCACATTGACCAGAGCAGTCTTGCCTGAGGGCACTTTGGGCCCATGGCCTGCAAACCTATGCCACCTGATCCCTGTCACCTCAGCACAGCCTCGTGTTGCCCTCTCTGCAGGTGATCAGGGAAGTGGCCTTTTAGCAACAAGTTACCATGGCTTGAGCCTGAGATGCAGTTAACTGACTTGAATGAAACTGAGGAAGGAAGTGCTCTGAGTCGTTCATGGCCATTGGTGGCCTTAAGCATGACTCGCTACACAGCCAGACAGTGAAGAGCCCCCGTAGGGCGAGGGCCCAACTTCTGTCCAAGTGGCTGGCACTGGCCAAGAGAAGGGCCTTGTGTGATGTGTCCTCAGAGTCCCCAGGCCTTCTCTTGGTCCTTTGCCCCAGCCATGACAGTTCTGTCTCATAGCACACGGTGATAGGCTAAAAATGCTATATAAAAAAATAATGTTATAGTCTCCCTGTCCTCACAGTAAATGTGTAGAAATGTTAGCGGGGATTTAGCAGCTGGTCTGCAGCCTCTTTGAGGACGTGGGGAATACGATGGACTCTCCACGTCAGCCTTTCGTCAGTTCCTCAGAGATGCCAGGCTCACACTGCCTTGCCTCTGCCTGGACCTGTCTCCCTCCAAGACTGTGGACAAGGGCTTTCCCAGACACCTGATGCTCGCACAGATGCCTCGGTGTCAGCCTGCATCCCTGACCACACCCTGCCCTCTCCCCTGCTTTCCGTCTTGACGGCACACTCCCTTAGTCCTGTGCGACCCCTGTTGGCTGCCTCCACTCTGGGGTGTAAGCGGCAAAGGCAGGGACGTCACCTGTGGTGTTCTCTGCAGTCTCCCTGGCGTCTGACTAAAGTGGGTGATCAGGAAACTCTGGCTGGGTAAAATAGCTTCTACAAACCGCAGCTATGTGTCCTTGTATTAGCAGAGTTTAGATTGAACCTTTCATCTGATTTGTGCTTAGCTTGAGAATGAGGGGGCGATTTTATTCAGCCACTTTAGAGAGTCTCAGAGTGTTTGTTACACTGTAACCTTGATGGCTGAGATGAGAAGGGTGTCCGAGGTTTCAGACCTTTCAAAGGCATTACTTTTTGCAGATGGTTTTTGCCCCCCATGCAGATGGGGGGAGTGGGGGGAAAAGGGAACATACTATTGTCAGAGATTAGGTCAGGAGGATGTCTTGGCTCAGAGTAAACCATGCATAAAGGTAGCCTGGCTGGTTAAATGACTGAGCCACATGAAACCAAGCAGTGGGAAGCACCCTGGAAGCATACTGTGTTGGCAGAAGTATGCACGGTACAACCGCATGGAGGTCAGTCAGACAGTGTCTATCAAAAGTGCAAATGCACAAACCTTTCAGGTCAGCAATGCTACGTCTAAGGATTTTTTCCTATATACAAGGATTTGCATTTCAGCATTATTTGTAATAGCAAGAAGATGGAAACTGCCACCAACATAGGGCAGTGGTTAAATAAATTGTGGCAAATCCATACAATGGTATATTAAGCTATTCTCTATCTTCTACCATGGAATGATCCCTAAGATGCATGGTTAAGTGGAGATAAAGACTTGGCTTACTAGTGTTTGTTTCTGAAAATAAAAGGAAGAGGGTGGGGAAAATGTGGCTGTATATATACTTCCTGTATGTGCGCATAGTTAGAGAATCTCTAGGGGGATCCACAGGAACCTGACAGCTTCAGCTGCCTCTGGGATGAGCGGTGGGGGTTACTTTTCACAGTTTATGTTTTGTATCTTTTGAATTTTGTACCATGTACATGTAATATCTATTAAAAAAATAAAGTTTTTAAATTTTCACTTTGTTTACATTTTTAAAAAAAGAAACAAGGTGTCAGATTTTTGGTGAGTAAATCCGCTTTCCTTAGAAATGTAAAGTCCTTGAGCCCAAAGTAGTTGATCTCATTTTCTCAGGTGTTAGGGAAAACAGGGAAGTGAAGGGGGGGCCTCCTCTTCTGGAAGAAC EMBV3_15035 TACTGTCTCTTATGTTTATATCACCCGTGCTGTTCTGAGAGTCCCGTCTGGGAGAGGCAG Gene GeneID:786610|LOC786610:XM_002691591:139_cdna Constitutive 0 NULL GeneID:786610 11 GENE LOC786610 NULL similar to olfactory receptor 366 EMBV3_05746 AGGGGTCTGGGCCTGTTCCAGTGACATCGAGGTCTTTCTCCAACTGGACCTCTGAGATGT Gene GeneID:509537|GRIP2:XM_002697138:94_cdna Constitutive 0 NULL GeneID:509537 22 GENE GRIP2 NULL glutamate receptor interacting protein 2 EMBV3_21831 GCAGCTGTTGCCTGGACGATGGCGGGGACGGCACTCAAGAGGCTGATGGCCGAGTACAAA Gene BVT0102_250225 + 0 NULL GK000001.2:144890447-145031788 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005530 1 XLOC_001290 Coding TCONS_00005530 XLOC_001290 Coding Coding - 1:145018484-145029042 - TSS2740 293 1 TCONS_00005530_1 60 4 0.972624798711755 0.00148594548874133 0.00102884957852444 0.000631672929903464 2.83418546230255e-05 6.74018157344859e-05 0.000561585432695791 0.00141314264971281 0.000524855902567319 5.3857531563518e-05 0.000379151540141767 0.000252617733551458 0.00210717400846893 3.9171120289027e-05 0.00279349756290177 0 0.0199364240319987 0.0102371459956436 0.00824944722998875 0.00489483935661565 0.00225806771373235 0.000535310331295449 0.00952487125984795 0.00259878397833815 0.00347117087913345 0.000331053050049399 0.00132252767276823 0.000559919140635491 0.00213083627059352 0.0029740668152885 0.00256495221182186 NM_001076328.1 UBE2G2 Bos taurus ubiquitin-conjugating enzyme E2G 2 (UBE2G2), mRNA. 2e-86 322 100.00 0.604095563139932 NM_003343.5 UBE2G2 Homo sapiens ubiquitin-conjugating enzyme E2G 2 (UBE2G2), 3e-58 228 85.05 0.716723549488055 TCONS_00005530_1 sp|P60604|UB2G2_HUMAN UB2G2_HUMAN Ubiquitin-conjugating enzyme E2 G2; 4e-23 88.6 78.95 0.933333333333333 0 noncoding 0 0 0 0 0.0895444614200184 0.420790422765452 0.0217216690413725 0.670974160126901 GCGCCCCGGAAGCGCTCCTGTACCCGCGCGGCGACCCGGAAGTGGCCCCGGCCTCGGGCGGGAGGGAAGAGAGCAGAGGAGGCGAGGCTGAAGGCGCAGCTGTTGCCTGGACGATGGCGGGGACGGCACTCAAGAGGCTGATGGCCGAGTACAAACAACTAACGCTGAATCCTCCAGAAGGAATTGTGGCAGGCCCCATGAATGAAGAGAATTTTTTTGAATGGGAGGCATTGATCATGTCCAAACTGGAGGGCACGTCTCCTGGTCAGCCTGTCTGCTTTGAGGCACTCAGG TCONS_00005531 s 3' 13250 TCONS_00005531 s 3' 2747 EMBV3_00179 CCAAAACCGAAGACCAGCGTCCTCAGCTAGATCCTTACCAGATTCTTGGACCCACAAGTA Gene GeneID:535231|ERG:NM_001102183:66_cdna UTR3_Alt 2 NULL GeneID:535231 1 GENE ERG MGC143243 v-ets erythroblastosis virus E26 oncogene homolog (avian) EMBV3_36081 GTGCGAATCTGTACTTCCATGATGTGGGAAAGTGAGGCTGCCAAGAGATACACTCACCAG Gene GeneID:614280|C4H7orf23:NM_001078044:44_cdna Constitutive 0 NULL GeneID:614280 4 GENE C4H7orf23 C7orf23 MGC155321 transmembrane protein C7orf23 homolog EMBV3_07198 GGAGTGTTCCCTATCCAATCATTCTTGCATGTAACGCAAGTTCCAGTTGGAGCTCTAGCC Gene GeneID:527403|MAT2A:NM_001101131:98_cdna Constitutive 4 NULL GeneID:527403 11 GENE MAT2A NULL methionine adenosyltransferase II, alpha EMBV3_05677 ATTGCACCTTTGGACATCGGTGGCGCTGACCAAGAAATCAGATTGAACATTGGCCCAGTC Gene GeneID:282188|COL1A2:NM_174520:15_cdna Constitutive 0 NULL GeneID:282188 4 GENE COL1A2 NULL collagen, type I, alpha 2 EMBV3_00511 CCCGCTGTGGCTTCTCCATCAACGTGCGAGGTTGACAGGCGCTGCTCTCGATGTGGGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41312 TCCTCGTGGATTAAGCTCCCTTGTCTGTGAAACCATGGGGAGGTTTTGTGGGCTAAGATG Gene BVT0102_051767 + 0 NULL GK000008.2:9481184-9488278 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39698 GACATTCAGGTAGGAATGATGGACAAAAAGGGACAGCTGGAGGTGGAAATAATTCGGGCC Gene GeneID:535674|RIMS2:NM_001102190:35_cdna UTR3_Alt 2 NULL GeneID:535674 14 GENE RIMS2 MGC159469 regulating synaptic membrane exocytosis 2 EMBV3_08058 CTTCAAGGACGGGCCCCTCAACATGATTCTGGATCCTGAAGGTGCCGGCCATCAATGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12074 ACTGCTGCTTTGGTTTACTCAGTTATCAGATAGACCTAAGAAGAATACCTTCCTTATAAG Gene GeneID:100124518|ZNF420:NM_001102552:474_cdna Constitutive 1 NULL GeneID:100124518 18 GENE ZNF420 MGC152124 Zinc finger protein 420 EMBV3_28938 CTTGATGTTGCGTGGCTTCTGGAAGTTGCTGGACTTGCCCAGGTGGTTGTCGAACAGTTT Gene GeneID:785010|LOC785010:XM_002690444:302_cdna Constitutive 0 NULL GeneID:785010 10 GENE LOC785010 NULL similar to myosin heavy chain 6 EMBV3_08669 TCCTACACCCAGAATACTCTTCGAGAAAGAGGGACTGTCAACCTCTCACTGGAGACACTC Gene GeneID:518758|SLC25A20:NM_001077936:196_cdna Constitutive 0 NULL GeneID:518758 22 GENE SLC25A20 CAC solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 EMBV3_09846 GAGGGCTCCCGCCAAGCTCTGGCCCTCCAGTCCCTAGGTTGTGTGCTATATGCCATGATG Variant GeneID:521237|STK16:NM_001046255:89_cdna 711^806 2 EMBV3_10630 GeneID:521237 2 GENE STK16 MGC137500 serine/threonine kinase 16 EMBV3_34077 AGTGCCAACCGACTAATTCATCAAACCAACTTGATACTTCAGACCTTCAAAACTGTGGCC Gene GeneID:506411|PDCD10:NM_001075259:112_cdna Constitutive 0 NULL GeneID:506411 1 GENE PDCD10 MGC140705 programmed cell death 10 EMBV3_21207 ATCAGTAGTGGTCCAGAGTTTAACCGTGTTCTCTTCAATTTTGGAGGTCAGAGTCCACTG Gene GeneID:616894|LOC616894:XM_002690974:370_cdna Constitutive 0 NULL GeneID:616894 10 GENE LOC616894 NULL similar to Uncharacterized protein C15orf33 EMBV3_26585 AAAGGGGACGTCCTGCACATGCACTATACGGATGTGTGAGGGGGAAAAGCGGAAGCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24683 TCAGAAGGGACACGAGTGCCCAGGAAGAACACAAGAACTGAGCGAGGAGCTGAGAGCACT Gene GeneID:614077|PTPN7:NM_001040576:108_cdna Constitutive 0 NULL GeneID:614077 16 GENE PTPN7 NULL protein tyrosine phosphatase, non-receptor type 7 EMBV3_02222 TGTTAGTAAGAGGCAGCACAGGGACTGAACCAGATGCTTTTCAGCTGTGAGGATGCTCCC Gene GeneID:515014|MRPL10:XM_002695917:280_cdna Constitutive 0 NULL GeneID:515014 19 GENE MRPL10 NULL mitochondrial ribosomal protein L10 EMBV3_19996 AGATGAACGAATGGCGAACGGTCCTCTATGGCTCCAGAAGTGGGGCTTAGTAGAAGTCAG Gene BVT0102_443781 - 1 EMBV3_22875 GK000025.2:9290513-9330657 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33980 TTTGCTGATTTTGAGTTCCCGGAAAGCCTTTGTGAGTGTGGCCCGCAGCGTGGTGGCACT Gene GeneID:614300|TMEM181:XM_002707841:1_cdna Constitutive 0 NULL GeneID:614300 9 GENE TMEM181 NULL transmembrane protein 181 EMBV3_33240 GACTGAGGAGACTTAGCAGCAGGAGCAACAGCAAGACTTCATAGCAATGAATTTCTTTTC Gene BVV0102_427323 + 1 EMBV3_36966 GK000009.2:53352400-53359608 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19821 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:505903|LOC505903:XM_002689354:22_cdna Constitutive 0 NULL GeneID:505903 7 GENE LOC505903 NULL similar to histone H2B EMBV3_01134 GCTGATGTTAACTGTATCTCAGTGCCAATGTCAAATGTGCCCCTCCTTCTCCCACACCTC Gene GeneID:539225|MAB21L2:XM_002694319:50_cdna Constitutive 0 NULL GeneID:539225 17 GENE MAB21L2 NULL mab-21-like 2 (C. elegans) EMBV3_11150 CTTGTCTTCTCTTCACCATGGCTTCTTCTGTCCCATGAAGCTGAGGTCTTGAAGCAGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10083 CAGTCGACGGCTCCACCATGATGAAGGCAGTGGTCCACGCCATGGACGGCACGGCAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16195 GGATCGCTTCCTTGGCTTCTTTATGGTGCCTGCCCAGTCCTCGTGGAACTACAACTTCAT Gene GeneID:507371|PRPF8:NM_001105638:70_cdna Constitutive 0 NULL GeneID:507371 19 GENE PRPF8 MGC159991 PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) EMBV3_32377 CTGACTCTATGTACATTATTTACACACCAGGGGCTACCATCTAACTCTTCAAACCAAAGG Gene BVT0102_405529 + 0 NULL GK000010.2:86011538-86023729 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42687 CATTGTAAGGGGACCCAAGGACCAGTTGCTGCTATTTTGAGAAAGACCTCCGCTCCCACT Gene BVV0102_091494 + 0 NULL GK000004.2:102366714-102401897 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185062 TCONS_00185065 TCONS_00185063 TCONS_00185061 TCONS_00185064 1 XLOC_111491 Coding TCONS_00185065 XLOC_111491 Coding Coding CREB3L2 4:102397451-102529709 = TSS137664 7656 1 TCONS_00185065_5 514 0.0441483803552769 12 0.942203437247178 2.49025570313137e-08 4.74798874046586e-11 2.44683426702335e-10 5.62409708175162e-11 9.10426258276545e-16 4.89517551017726e-05 4.53156126249538e-15 7.50489876831721e-14 0.000184775536775104 2.37397920799894e-12 9.65300463840138e-06 3.89950551411316e-13 1.57129385818407e-05 5.21519283431931e-06 6.56149081748158e-05 0.00431276348656766 0.000742564114051979 0.00211616337998847 0.000271353735619883 0.000195283854067034 7.14263323271406e-09 1.93121494113508e-05 0.000758176926293702 0.00186778730297678 0.000135426200369237 1.47408334129988e-13 4.28929247685028e-12 5.6210843879136e-05 2.63248213645498e-24 7.21631009188334e-05 NM_001102533.1 CREB3L2 Bos taurus cAMP responsive element binding protein 3-like 2 (CREB3L2), mRNA. 0.0 5761 99.32 0.421368861024033 NM_194071.3 CREB3L2 Homo sapiens cAMP responsive element binding protein 3-like 2 (CREB3L2), transcript variant 1, mRNA. 0.0 2821 78.08 0.442528735632184 TCONS_00185065_5 sp|Q70SY1|CR3L2_HUMAN CR3L2_HUMAN Cyclic AMP-responsive element-binding protein 3-like protein 2; 0.0 906 92.12 0.998054474708171 3 coding 0 0 0 0 -0.0193625811968525 0.946970873704911 0.0111997450591221 0.844436347496013 GAGCAGAGCTGAGGAGCCCTGGGGAGTCTCAAAGTTTTGAGTCTGGAGCAGTAGCGGAGAGTGGGTTTATTGAGAGGGGCTTTTCTTGGGATGAGGATTGATCTCCTGCCTTTATTTTGGAGGCACACTCTGGTTTATTCTCCTCAGCCTACGATCTGATCTCCGGACAGTCTGTTTCCTTAGGAGATTCTCAGGTCTCCGAGGACACTGGACCCTTGGCAGTTCTCTCTGAGGCAGAGGAGCGAACGGTTTGCTTCCTAAGTGCATAAGCTACACGCATACGCACGCACACACGGGCACACACACAGGCACATACCCTCTCGCGGAGGCGGATCTCGCCCACCGAGGCCGCCCAGTCCGCTCCCCTCCTGCGCTCAGCATCCTCGGCCCAGCGCGCCTCGGACCACCATGGAGGTGCTGGAGAGCGGGGAGCAGAGCGTCCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTCAGAGCCCGGGGAGACCGAGGCTCTCATGTACCACACGCACTTCTCGGAGCTTCTGGATGAGTTTTCCCAGAATGTCTTGGGCCAGCTCCTCAACGACCCTTTCCTCTCAGAGAAGAGCGTGTCGATGGAGGTGGAGCCATCCCCGACGTCCCCGGCACCCCTCATCCAGGCCGAGCACAGCTACTCCCTATGTGAGGAGCCTCGGGCCCAGTCGCCATTCACCCACATCACGGCCAGCGACAGCTTCAATGACGATGAAGTGGAGAGTGAGAAATGGTACCTGTCTCCAGACTTTCCACCAACAACCATCAAGACAGAGCCCATCACGGACGAGCCACCCTCAGGACTCGTCCCCTCTGTCACGCTGACCATCACTGCAATCTCCACCCCGTTTGAAAAGGAGGAAACCCCTGTTGATTCCTCATGCCAGACCATTATTCCTAAGATTAAGCTGGAGCCTCATGAAGTGGATCAGTTCCTAAACTTCTCTCCCAAGGAAGCCTCCGTGGACCACCTGCACTTACCGCCCACTCCTCCCAGCAGCAACAGCAGCGACTCCGAGGGCAGCCTGAGCCCCAGCCCGCGCCTGCACCCCTTTGGCCTTCCGCAGACCCACAGCCCCGCCAGGGCCCCAGCGCGGGCCCCCTCGGCGCTGGCCAGCTCCCCGCTCCTCACTGCTCCTCATAAGCTGCAGGGATCAGGCCCCCTGGTCCTGACGGAGGAGGAGAAGAGGACCCTGATCGCTGAGGGCTATCCCATCCCCACCAAGTTGCCCCTGACGAAATCAGAGGAGAAGGCCCTAAAGAAAATCCGGAGGAAAATCAAGAATAAGATTTCAGCCCAGGAAAGTAGGAGGAAGAAGAAAGAATACATGGACAGCTTGGAGAAAAAGGTAGAGTCTTGTTCAACGGAGAACTTGGAGCTTCGGAAGAAGGTGGAGGTTCTGGAGAACACCAACAGAACTCTCCTGCAGCAGCTGCAGAAGCTTCAGACTTTGGTGATGGGCAAGGTTTCTCGCACCTGCAAGCTGGCCGGCACGCAGACTGGCACATGCCTTATGGTCGTGGTGCTGTGCTTTGCCGTAGCATTTGGCAGCTTCTTTCAGGGCTATGGGCCCTATCCTTCTGCCACCAAGATGGCCCTGCCCAGCCAGCATTCCCTGCAGGAACCCTACACATCCTCTGTGGTGAGATCCAGGAACCTGCTGATCTATGAGGAACATTCTCCCCTGGAGGAGCCACCCAGTTCCGCCTCAGCTGGGGAGCTGGGACGCTGGGACCGAGGCTCTGCTCTGCTCAGGGCAAAAGGGCTGGAGTCCAGGCCGGACGTGGATCTTCCCCATTTCATTATCTCAAATGAGACCAGCCTGGAGAAATCAGTGCTGTTGGAGCTGCAGCAGCACATGGTCAGCACCAACCTGGAGGGGAATGAGACACTAAAAGTCGTAGAACTCGACAGAAGAGTGAACGCCACCTTTTAAAGAGGCTATCACCACCTCCCTCTGTCTCTTCACTTAGCCTTTACCTCTCCAAACCACCTTTTGTCATAAGCTTTTCCTTTTTGCCCACCCAATCTGGACGAAAACCTGGACCGCCGGTCCTGGCTCTGGATGGGAGGACGGACGGACGGCCTGGAATTTCCGCCTGCGGTGAGAGAGCACCTCCCCCGGTCCCATGTCCCTCCCTGCAGAGGAGCCCGCCCCGTCCCTCGCTTACTGCCATAGGCAATTATCTTCGGTCGGGGTGGGACAAGCAGGCTTGTTTCTACCGACAGTGCCAAAAAGATACGGCCCGATTCTCACCGGGGTGGGTGTGACCGCCTCCTTGAAGAAGAGCTGACTGTTGTTCACTCGAGACCCCACAAAAATACCAGGATGCTCTGGCGAAGCACTGACTGACGTCCTGCCTTCCTCAGCCTGGCTCTGCGGTGCCCCGCGGGCGCCCCCTGCCGCTCTGCCCGGGGCCCCGGCCCAGGGCCCCTTCGCTGGAGCAAGGCGCCCCTTTCGTACTCTCAGGCCGCAAGTGCAATGCCTGAAGGAATCAGGCTTCTCTACTCCAGGCAAACCTGCCCCACCACGTTGCTTGTAGGATTTCACAGTCTGTGTCCCCACACGCCCCTAGTTCTGCCTCCCTGGCTTCTCCTCCCCATTTGTAAATAGTATTTATTAGCTTGCAGAGGCTTCCCTGGGCGACCACTGAAGACATCCGGACGCCTCCCCTCCAGGCTCACAAGGTCCTCTGTTGGCCTGTGGAGCGAAGAGGGCGGCCTGGACTCTGGGATTCCCCATTCTTCCAGGCCATGTTTTGTTTTGTGTTTTCTTCTTTTTTTTTTTTTTTGCTGGAGGCTTCTAATTATAGTTGGGGAACCTCCCTAAGCACGTGTCCTCCTGAAGCATGAACTCAGAGAAGACGGAGCAGGGCTCAGGTCTGAGGCTCTGTGGACAGGTGCTTTTTCTGCCCTGTGCCCATGCCAGGGAAGCCCTGACCCCAGGCGTTTCAGACAGCCATGCTAGCCCAGTTTTCCCCACCTCCCCTGACACGTCTGCTTTCCCTTCCTCTTCTGCCTCCATACAGAGGGCTGGGCCTGAGGCCTGCTCCTGGGGTCAGAGCAGGCGACATTTGTGTATCTGTCTTACCTTTTCTAGTCAGGTTTGGCCACTTTGCAGCTCACCCAAAGAGACACGACCTAATCCCCCAACCTACTTCTTTTTTTTAATGATTAAGAGTAACTTTTGTAGTTAAAAAAAAAAAAAAACTTTCCTCTTTCATACAAATAAGAAATAGAAATAGACGTTTTATTGTATAATGTAGAAGGCTCCCCTTAAATGTTTTTCCCTAGCTTGTAAAAGATTTTGTGTAAGAAATTTGCTCACATTTTGTTTTTTATTTTTAGAAGTAGCTGAAGCACATTTAGTTTGAACTCTGTTGTCTCTGATTTTCTCATCTCTTTTGTCATTGGAACCTGTACGTAGGAGAGATTAAGCCACTCCTGGGCCCTCTGTTCCATACCAGCCACAGAATTTGGCGTCATTAACATTTGCCATGAGACCTCATAAGCAGTGGACTCATTGGACACGAGTCTGAGCAAACTCCGGGAGATACTGAAGGACAGGGAAGCTTGGTGTGCTGCAGTCCCATGGAGTTGCAAAGCATCAGATACGACTTAGAGACTGAACAACAATGAACTCATAAGCAGATCTGGTACCTTCAGGGCTCACCGTCAGTGATTCCTCTCTCTCCCTACTGTGATGGAGAAAGTTCCGACAGGGAGATGGCCAAGTTCCTCTTCTTGGCGCTGTGTAAATCTGGATCAGGATCACAGTGGTCGCCTCTCGCTGTCCCATCCATTGGCCAGCAAAGGGTGAGACCAGACAGGCTGTGCCGTGTGGAAGGAGGGTTGCTAGTACATGCCCTGTTCCCTTCTGTTTCTGTCTGCTTTACTCTCTCCTCTTCCGCTCTAGACCTTCCTGGGTCCGGCTGGTGTCTGCCAACCAAGGGCCAGTACTGACCCACCCCTCTCTTTAATGTGTCATGTAATTATCAGGCATAGGCAGCCCATGGGGTGGGGTCAAGGGTGGCTAAGAAGGTGAGAAGGTACTATTAACTCTAGTATTTGGATGATTAGAAAGTGATGCTTTTCCTGTGTCGGTGAGAATGGGTCAGCTTACCCACTGACACACTGGAAGCAGATCGGGTTTTTAAGGCTCCTGGATCAGCCCGAGTGGAAAACCTCTTATTCTGAGTAAAGAGGAAGAAGGCAAAGGACAACCAACTCCTAGGGCCCATCCTTAGTGCCTTGAGGATTTTATTTCCTCACTTGACCTCACTCTCTCCAGCCCTCCAAACAGCAGGGCTTGATCTCTGGGCAGCCATTCTTCCAGAACTGAATCTATGTCTAGAGACTGAGGACATCAGCCTGAGGGCTCAAATGGCCATTGTAAGGGGACCCAAGGACCAGTTGCTGCTATTTTGAGAAAGACCTCCGCTCCCCACTCCTTGCTCAGGCGAAGAAGAGGAGCTAAACAGTTACCCCTTAAGGAGAATGTAATGGAGTCCAGAGGATGCAGAAGAGTTGGATAACACCAGATTGGTTCTAAATAGTTAATGTGCACATTTTCTCTTCCAGGGTTAAGCTCACAACGTCAGTGGATTTGTTTTCCCCCCAGAACCATCCCATAGCATAGATGAGTCAGCAATACCTGGTTAGCCCTGAAGATGTTAAATAGTGGCAGGCTTTCGGCTTTGGAACCTCAGGTTTGGAAAATTTGAGACTGTTAGCACAACCATCAATCATAAAGAATCAATGTTCATGATAAATATACTAATATATTTTCCATCATGTCAGCAGGTTTTCCTCTTCCCTTTCTTTGATTAGCCTAGTGGAGGAGATGTCTTGCAAAAAGTTCAGAGAACACATACTTTTTTCACTGGGTGAGACCTGAGTAACCCAGACTCCCCAGCGTGGTTCTATTCACAGCTCTGGACTTTGCACTTAGAAATGGCTACTGTAAATGAAAGGCCTCAGTGCCAAGTTTAAGAAAGGATTTCTGTGAAGTGTTAGGACTCTGGAGCCTAGCTCACATAAAGAGAGTGTTATATAAAAACCTGACAGCTGAACTAGGTTGCTTCTTTTGGGCAGGAGGTGGGGATGAGTTTTGACACCAGTATAGGCAAAATTAGATAACCTTTTTATTAGTATAAATGATTTTGATTTAGAGACCTCATTTGCAGATTGTGAAAGCAACTTTTAGTGCAATTTATTTACAAACCAACTATAAATACCGTGGGGTTTTTTCCTTCCTCATGCCTGAATGCCAAGAGAGGGCTGTGATTCTCATGTGTCCTTGGAGCAAGAGTGTTGAACTGGTTCACCTTTGTTCTGGCAGTGAGTCAGTGTCCAGAATTTTTGACACAAGTGTTTTATTAAAAATTTGTGTTTTTTTTGCACTTTGTGTCTCCTTCCTCTGTGTTCTCACACTGAGCAAAAGACAAGGATCAGAGGCCCCTCAGGGCCAGCTCCTCTGAACACACATGTCGTCTGTGCACAGGGTGCACGCTCAGAGACCTCCCGCTTCCCATCGGGGAGATGGAGCATCCGTGCGGCCTTGCTAACATGGGGAAATGGGAGATGGAGGAGAAGGCTGTAGCCTCCCCCTTCTCTGCCAAGTGCTCTTGTCAGTAATTCAGTTCTGTGGAGTCCAGTCTTTATTCCAGACACTAGCTCTCCTACTTGCAGTGCAGACAGACCATTAGCAGGTAGTGCTCTGGTCAAGGTCATTTTCTTTGAATGCTTTTTAGCTGAGACAGTTAGGAGACATGTGATCGGATAAGACCCTCTGGGAGGACAGCTCTGGGAAAGAGTAGAGGCCTGTGAAGCAGCCAGAGACAGAATTCAGATTCTTCTTTTATTCACTCACCCATTCATTCATTGAGTTGTCATTCATTCCCAAGAAAGAGTGTTGCAAGAGGCCCTAGTGGATATTGGGGAGTAAGGGGCCTGAGGAAGCTTCATTAATCAGTAACTATTCAAAAGGCCCCAGTGCCAGCTCTCTCTTTCCCTCCCTTCCCCCACCCCTTGTGTGGGCACACACATAGATGCACATAGATACACACAAGAATACATTCCTCCCTTGTCTTGGATACTCATTTGTGTGTTACATGTGCCTTATATTTGATCCAGGATGACTGAGGGCCACCTTGTCATTGGGAGTTTTTGTATACACCCTGGTAGTACTAAATTGAAGTGGGTTTGGATGACAAAACTTCCAAAGGCTCAAAAACTGGTTTCCTAAAAGTGAGCCTTGATCACATCTATACATCAGGAGAAAAGAAACAGAGTAACGTCCATTAGGAAAATCCCATTTTTCCAAGGTGCAGTTACATCAGAAAATGGCCAGCCAGGATTCAAGGTATTATAAATCCTCAGAGCAGAACATTTTCTTGGCAGAGAAGAATCCAGTACCTTTAAGGATTCAGGCTCCATGTCTCCATGGCCAAAGGGTCAGTACCACCTACCACAGGACATATTTCATGTTGTCATTTTGGGTAACAGAAAATTCAGGAATGCTGTGTCTGAGTTTCTGGAAGGAAGGAAAATGATAATTCTTGAACACTTACTAAATGCTGGGTGCTAAGTAAGGGATTCCTTGGTGACTCAGCAGTAAAAAAATCCACCAGCAATGCAGGAGCTGCCAGAGACATAGGTTCATTTCCTGGGTCAGGAAGATCCCCTGGAGGGTTGGTGGGGGGGATGGCAATCCACTCTAGTATTCTTGCCTGGAGAATCTGGTGGGTAGAAGAGCCTGGTGGGCTACAGTCCATAGGATCACAGAGTCGGACATGACTGTAGTGACTTAGCATACACACATATACTAAATAAGTCTTTTAATGTTATAGAAAGAGAAAACAAGGGCAACTAATTATTATGAGATGATAAACAGCTAAGTGATAGGGGAGGTGCAGCAATTTGTGGATTAGGGTGAACAGATCTCTTTCTGCGTGAGCACACTGTAAGCTTTGAAGTTCCTCTGGGCAGAGAATGCAGTGCCTCCTACTCCCTGGGCTGGCCCTGCTGTGCAAAGTTGAGGGGTTTTTGCCTCATAGTGCAGATGTTCATCTGTTCAGTTCATCCCATCCTCTATAGTTACAGCTAGCAGCCTCTGCATCCTGGGAAAGCAACACCAGCAATTTTAGCTGTTTCTCTGTTCCTCTCGCTTGCTCACCAGCTGACTGAGAACATGAACTTTTTGCACCATGGACCCATGGCCTACACTGTTCAGCAAATCTCCCTTTCAGACGGAATATTTTCTGAGTCTACGAAAAACACCAGCACTCTTTGACAAATTGTGGGTGACCGTTTTTAAACAATACTGAACAGATTCTGGACTATAATCAACCATGAGCTTTAATGTTTGTGCTGACAGGCTGAGCTTTCTCTCTTTGGTAACAGGTTATATAGACCAGTAATGTTTAAGTCTAAATATATTGTGAGTCTATTATCTGTCATTATCACGCTGTTTTTTTTTAATGGCTTTTTATTCTTTATCATAGTTAAGTAAATACAAAAAAAAAAAAGCAAATGCTTTGTAGGATACTTGTATTTAGTTTGGAAAAAAATGAATTTAAATTGTTATGCTTTTGTATTTCCATTTCTTGCAAATAAAAATATTTTTTCTTAAATAGTA EMBV3_38731 ATGTTAGAAGAAATATCCAAAAAGATACAGCTGTTATGGAGGACTTGGGAGATCTTGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28236 CAACCTGTTGCCCAAGCTCCATGTGGTCAAGATTGTGGCCAAGAAATACCGCAACTACGA Gene GeneID:281696|CLIC5:NM_174276:204_cdna Constitutive 0 NULL GeneID:281696 23 GENE CLIC5 NULL chloride intracellular channel 5 EMBV3_20028 ATGTGCAACATCCAGAGGCTACTTTCTCACCAAAGCCTTGACTGGGCATCACATGTCACC Gene GeneID:617063|FSIP1:XM_002690818:59_cdna Constitutive 0 NULL GeneID:617063 10 GENE FSIP1 NULL fibrous sheath interacting protein 1 EMBV3_21700 GCTGACACTGACTGCGTAGCCAGCTTCCATGTTGTACAGAAATGAGCTGTCATATAATGG Gene GeneID:514391|ANUBL1:NM_001076851:23_cdna Constitutive 0 NULL GeneID:514391 28 GENE ANUBL1 MGC139301 AN1, ubiquitin-like, homolog (Xenopus laevis) EMBV3_09872 TTCCATCAAAAGACTTGTTAAAATCGGTAGTGCTCTCACCATTGGACCAGATATCTTGTG Gene BVV0102_334967 + 1 EMBV3_20136 GK000002.2:37235997-37237433 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105046 TCONS_00105049 TCONS_00102246 TCONS_00105045 TCONS_00102247 TCONS_00102240 TCONS_00105044 TCONS_00102261 TCONS_00102252 TCONS_00105048 TCONS_00105047 2 XLOC_062497 XLOC_061832 Coding TCONS_00102246 XLOC_061832 Coding Coding WDSUB1 2:37167344-37237340 j TSS76191 3151 1 TCONS_00102246_3 451 0.0434782608695652 12 0.955153939567112 0.000231814080712548 0.000830923750215797 0.000403224545708698 0.00029499024913409 5.96835095160527e-05 1.6633530905307e-05 4.47373955266586e-05 2.84453302977319e-05 0.000214578658050521 4.61833179550756e-05 1.3305279326628e-06 0 1.25901516095144e-05 2.9666115089861e-05 3.61498303027327e-96 9.63216116087082e-44 1.195185413833e-191 0 0.000114096302335979 0.000108405102011553 3.08434791974602e-05 7.3934846704878e-139 1.5792256646033e-05 1.17027874966525e-65 0.000487060565431479 7.84521138193068e-05 0.000396049131680326 2.35919306212128e-28 1.50333416635215e-05 2.5924918420057e-77 XM_002685348.2 WDSUB1 PREDICTED: Bos taurus WD repeat, sterile alpha motif and U-box domain containing 1 (WDSUB1), transcript variant X1, mRNA. 0.0 2502 100.00 0.439860361789908 NM_001128212.1 WDSUB1 Homo sapiens WD repeat, sterile alpha motif and U-box domain containing 1 (WDSUB1), transcript variant 2, mRNA. 0.0 1732 89.49 0.411298000634719 TCONS_00102246_3 sp|Q8N9V3|WSDU1_HUMAN WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1; 0.0 783 83.63 0.997782705099778 5 coding 0 0 0 0 -0.043801953541578 0.821698241301216 0.0139000032018992 0.785165793014857 GGCGTTTTGGGTCTTCGACGTGAAAGGACCAGTGCCCAAGGGCCAGTTTAGCAGCAGCGGTGGCAGGATGAAGTAACGTTTATCTAAAAACTGCAGGATATTTTCCAGTAAAGAACATGGTGGAACTAATTCACACATTAGCAGATCATAATGATGATGTCAACTGCTGTGCCTTCTCCTCTTCCCTCTTGGCTACTTGTGCCTTGGACAAAACAATTCGCCTATATTTCCTGAGTGACTTTACCGAAGTACCATACTCTCCATTGAAGTTTCACACCTATGCTGTCCACTGCTGCTGTTTCTCCCCTTCAGGACATATTTTGGCTTCATGTTCAACAGATGGTACCACTGTCCTATGGGATACTCAAAACGGGCAGATTTTGGCAGTGATGGAACAGCCCAGTGGTAGCCCTGTGAGAGTTTGCCGATTTTCCCCAGACTCCACTTGTTTGGTGTCAGGGGCATCTGATGGAACTGTTGTTTTGTGGAATGCACAGTCATACAAGTTACATAGATGTGCTAGTGTTAAGGATGGCTCCTTAGTGGCCTGTGCGTTTTTTCCTCCTGGAAACCTCTTTGTCACTGGCTCCTCATGTGGTGATTTAACAGTGTGGGATGATAAAATGAGGTGTCTGCACAGTGAAAAAGCACATGATCTTGGAATTACCTGCTGTGACTTTTCTTCACAACCAGTTCCTGGTGGAGAACGAGGTCTTCAGTTCTTTCAGTTGGCATCATGTGGTCAAGATTGCCAGATCAAAATTTGGGTTATTTCTTTTATCCATATCTTAGGTTTTGAATTAAAATATAAAAGTACGCTGACCGGACACTGTGCTCCTGTTCTGGCTTGTGCTTTTTCTCATGATGGGCAGATGTTAGTTTCAGGATCAGTGGATAAGTCAGTTATAGTGTATGATACTAATACTGAGAATATACTTCACACCCTGACTCAGCACACCAGGTATGTCACAACTTGTGCCTTTGCACCCAATATCCTTTTACTTGCTACTGGTTCAATGGACAAAACAGTGAACATCTGGCAATTTGACACGGAAACACTTTGCCAAGCAAAGATCCCAGATCAACCAAAGCAATTTACTGAAAATTGGTCAGAGGATGATGTCTCAAACTGGCTTTGTGCCGAAGGTTTAGAAGACCTCGTTGATATTTTCAAAATGAATAACATTGATGGAAGAGAACTATTGAATCTTACAAAAGAAAGTCTAGCTGATGATTTGAAAATAGAATCTCTAGGGCTGCGTAGTAAAGTTCTAAGGAAAATTGAAGAACTGAGGACAAAGGTGAAAACCCTTTCTTCTGAAATTCCTGATGAATTTATATGTCCAATAACTAGGGAGCTTATGAAAGATCCTATCATCGCATCAGAATATGAACACTTCAAGAAAAATATCAATCGCTGTCAAACTCGTCCAAACAACAGAAGAGAGAAAACTTACAAACTCATTTTATGAGCCAGCATTACCCTGATAACAAAATCAGATGAGAGCACACAGGAAAAGGAAATTTCAGATGGCTACTCATATGAAAAGGAAGCAATGGAAAATTGGATCAGCAGAAAGAAACGTACCAGTCCCATGACAAATCTTGTTCTTTCTTCAGTGATACTTACACCAAATAGGACTCTGAAAATGGCCATCGATCGATGGCTAAGTGAGACACATCAAAAATAAAACTCTATATTGTGTTATTTATATTTTCTGTGATCTCACTTGAGTGATTTAAAGGTAAACTTTGTAAACTGAGTTACCTACCTTTTCATATAATAGTGAATAAAATCTTAACCTATAGAGAAAGTTTTACTTTGACTTCAAATTGCAATGCTCAAGTTTATTCTGGTTATAGATCATATTCCATTATAACCAAAGATCAGAATAATCTAGACTAGAACATAATCCTAGTTAATAACATTTCATTTGATAACTCTCTGGAATCCTTCTAAAGAGTTTTTTAGCAAAATAATTATAGATTTGTTTACGAATACATTGAGAAAGTCACTTTGATATATTTACTAGCAGTTTTTTAGCTTCTAAGTTTGCAAGGTAGTAATGATTTTTTTCCCCATTGTCCAAACCTAGGTACAAGTTAGATAGCATAAATTATCACAGATACATTAAGTTGACTTTGCTGAAACATATAAAGTGGCAAACTAGCCTCCTTTTAGAATATAGAGTTCTTAAAGTTCTCACATCATAGTTTAAGCTAAGGTGACTATACATTTGTACACAGTAGGCTGATAGCTAATACAAGCACCCTGACCAACATTTGCTCAGAAGACTTCAGGTCCCGTAAGTGGAGGTTACACTGCCTCTCCCTCCCTCTCGCAAGTTGTTCACCAGAATGGAAGCCATTAGTGCAAAGCTTGCTAAAACTAAATAAACTCTAAGGGCACGGAGGGACCAGGACTCTGTACTTACCCCCAAACCCTCACTGTAATTGTTCTGAAATTTGAAAACACAAATAAAAAGCAATATAAGGATATATTCCATCAAAAGACTTGTTAAAATCGGTAGTGCTCTCACCATTGGACCAGATATCTTGTGTTTTGATAAAATAATACTTATTTTTCAAAAGGGCTAGCTGGTTTTCACATAAAAATTACTAAAAATTATTGAAGTCACTGACAGAAAACACAATAAAAGATGTTATTTTTTAAATGTTTTAAAGAAGGTGATTTTCTTTTCCTACATTTCACTAGGATAGTTTCTAGTTAAGTGACTGAAAACTAAGATGCCAGTTTACCAAAGTGAAGTGTTCTGTTTTTCTCTACAAACAAACCAAAGCTAACTACTCCTCCCCACAAAGCACAGGCAAACAAAAAATCAAATCTAAAACCATCCATAGGAAAGGATACCGCCTGGCCCTCCACACCGCACTAGGGGCCATTGTCCCTGCAGGACTCGCTCCTTGGGCCTCAGCTCCCACCAACAGCTTCCCAAGGAGACAGCACTTCCTGGAACTACTGGACCAAATACATTTACTCAGAATCCATCACAGTAAATTCTAATAGTCATACTGGCAGCATCACAGGAAAAGTCATCCAATAAGCATTTATCTGCTACTAGAGTTTCCCCTCCTACCCAGTTTTGTTTTTTGACCTTGAGTTTAAATATATGACTTTAAATAAGGACTG EMBV3_28712 GCATAAGAAAAACATGGATGGAACTTCCCAGGTGGTCCAGTGGTTAAGACGCCACTCTTC Gene BVV0102_116737 + 0 NULL GK000010.2:67908835-67984894 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42021 GGAAGTTAGCCTGAAGTGGAAGTCAACAGCACCCCTGGCCAAGAATGGTAACAATGTAGG Gene BVT0101_050002 + 1 EMBV3_25587 GK000017.2:64891608-64899651 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075913 TCONS_00075917 TCONS_00075921 TCONS_00075918 TCONS_00075919 TCONS_00075922 TCONS_00075916 TCONS_00075920 1 XLOC_046679 Coding TCONS_00075919 XLOC_046679 Coding Coding SIRT4 17:64882719-64893638 j TSS57105 2949 4 TCONS_00075919_8 62 0.114276025771448 4 0.730261952738597 4.5794276450054e-10 2.11808918901422e-05 0.00044353520242875 1.63836158372827e-05 6.17276420494548e-10 9.13808816206255e-06 9.89719842354059e-10 2.15012244657596e-09 2.25342534098264e-07 3.74113842985361e-12 1.37943690683766e-33 6.97796637005385e-12 6.06638792245063e-12 2.78509817393936e-12 4.1302202748657e-06 0.000216801741002834 3.54910621595644e-08 0.0027314405960559 7.31574833432142e-09 1.69285170351666e-09 1.25271141363917e-07 1.49711530723587e-05 3.47531103433261e-10 0.00012296445063785 1.39865661638682e-05 2.91410993877695e-08 5.73857716598049e-09 1.43219410673079e-05 6.56040102899743e-13 2.31366922060459e-12 XM_005217844.1 SIRT4 PREDICTED: Bos taurus sirtuin 4 (SIRT4), transcript variant X1, 0.0 1600 100.00 0.300440827399118 XM_005253864.1 SIRT4 PREDICTED: Homo sapiens sirtuin 4 (SIRT4), transcript variant X1, 3e-178 630 87.04 0.174974567650051 0 coding 1 1 1 1 -0.0242818712173581 0.872878205032643 -0.00123059204823411 0.981470342799049 TCCCTGTTGGGCGTAAAGTGTCCCTTAAGCTGTGGAAGGGTCCTCTGCTTGGATTGTGGGGAGCAGACTCCCCGTGGGGTGCTGCAGGAGCGGTTCCAAGTCCTGAACCCAACCTGGAGTGCTGAGGCCCACGGCCTGGCTCCCGACGGCGATGTCTTTCTCACCGAGGAGGAGGTACAGAGCTTCCAGGTCCCATCCTGCTCTCGATGTGGGGGCCCCCTGAAACCAGACGTCGTCTTCTTCGGGGACACGGTGAAGCCTGACAAGGTTGATTTTGTGCACAAGAGGGTGAAAGAAGCTGACTCCCTCCTGGTGGTGGGATCATCCTTGCAGGTGTACTCAGGTTACAGGTTCATCCTCACTGCCCGAGAGAAGAAGCTGCCCATCGTGATACTGAACATTGGGCCCACGCGGTCCGATGACCTGGCATCTCTGAAACTGGATTCTCGTTGTGGAGAGTTGCTGCCATTAATAGACCCACGCTGACCACAGCCTGATGTTCTGGAGCCGGAAACTGGGGCTTTCACTTTAATTCTGCTGCTAAGGATACCTAAGGATTCATCCCCGCTTCCTCTATCTGACCGAGGCTTACCAACTGTAGCCTGCAGAGGGCGGCAAAGCAACATCTCTCTGCAGGACCATCTCTGAACCCAGCAGGTTTCAGAGCTCAGGAGTTAAAATCTTCAGGCTAATGAGATTTACCCCATAAGATGGACTTGCAGTTTCTTTTGATAGGAAAACTGCTTTTTAAAAATCTCATTAGGCAGAAGAAAGAGCCCAGGAAATATGTAAACCAGAATGACCTCCAGAGTGCTAACCTAGGGATCTCACTAATATCCTAAGTAAGGGGGTCGGGGGAAGGAAATGACTTAATTTCTAATTCTAAATGGTTAAATATATTTAAGTGAATCATTTTGATATACTTTTTTTTTTTTTTTCAAAAAAATGATGAGCAATAATATGAATTAATTTTTTACTAACCAAGGGATAAAGGAAACATTTTTTAAATAGCACATTAGGTATGTGGGTTGTACTTTTATTTTTTTTAATCAGCTGAAAATGAATGTAGCTTTATGACCCAGTTCTCTAAGGATTTCTGCTTGATTTCAGCTGCTGGAATGAGACGGGCCTTGAACCTGGTCTGTAGAGAGGAAACAGTGAATTCCCAAGTGGGTTCTTAAATTGATTTGTTTCTGCTGAGGGAAGCAGCAAGCCTTGTTTGATTACTGTGTTAGCCAGAGAGAATCATCGTCCTACGCTAAAGCTTTCTGCACAATCTCATCAAAAAGTGAGGCAGGTGAAAGATTCACAGCCTATTCTGGATAGTCTTTTGTCTGAAATTGGGGCAAGCAATATACATTTATCCTGCATCTGCCTAGGAAGCAAATTTCAGTTAACTGGGATAACCCAAGATATTGAAAACACATAGCTTTCTTTTCACCTGCACAATATGTTTGCTCATAACCATCCATTAATGCTGGAGAGGCGTAAGGTTGTTGTAAATCTCACTCCAGCTTTTTTGCATCTAGAGATACTAAGATGCTCTGAACGAGATTTGCTCAGTTACTGAAAGTCGGTACTACCAATAATTGCATTCAAATCTGGGTCTTTTGAATTCCAAGCCATTCCCCGCCATGAATCTCATAAATGGTTACTGACCAACAGTGTATTTATCTACTAAGGCTACAAAGATACAGCTCCTTGTTCTCAAGTGGCTCACAAAAGATGTGTTATCTCGCCCACCCTCATTCCTTACCAAAAGATGTCACAGAGTCAGGCATGAAATGATAGGAGAGAAAATTTAGTCCATCCCCGATTCACTTTGTCTAAGATCCAGACTTAACTAAGGCCACAGTTTTTAAAGAGCCAGGACTAGAATCCAGGTAGATCTTCCTCCCTGTTCTTTTAGACAGCAGTGATTCCTACCTCTCTGAAGATTCCAGTTAGTAGGAAGTTAGCCTGAAGTGGAAGTCAACAGCACCCCTGGCCAAGAATGGTAACAATGTGGGCAGTGGAGACCAGGTTAGGCTGCCAGGGAGAGAGGTCAGGCTCTTTTATCACCTAATGCTGGCATGATTCATGAAACCAAGTCTTGAGGGCCTTAGGAATGTTTGTTTTGGTTGTATTTCCTCTGGAAATGAATTCTTTGCAAAAAAAATTTGCCTCAAGAGGAACCTGGCATTTCCTGAAGCTGATGCTTCTCATGTCTCTTACTTTGCATCTTTTGCTTTCTTCTAGCTTTGCAGTTCCCAACCCGCTCTAAGTGCCCTGAGTTGGACTAACAGACTTCTACTAGCGGGTGCTGTCAGCTTGTCGCTGCCCTGGTTACATGGTTCTAACTGCATTCATCCAGCTTTGGCTGTGACTTTCACTCATATCCTTCCTAGTTGCTTCCACAACTCTGCTATCACAGTTGTATTATATTGTTTGCTTTTTAATTAATTTATTTACTGTGGCTGTGCTGGGTCTTCATTGCTACACACAGGCATTCTCTAGTTGCAGTGAGTGGAGGCTACTCTTCTCTGTGGTGTTCAGGTTTCTCATTGCTGTGGCTCTTCTTGCTGCAGGGCACAAGCTTTTCAGCTCAGACTCAGTACCTGGGCCCCATGGGCTTTAGTTGCCCCAAGGCATGTGAGGTCATTCCCAGACTATGGATTGGACTTGTGTCCCCGGCATTGCAAGGCAGATTCTTATCCACTGTATCATCAGGGAAGTCCTCACGGTTTTCATAAGTAGAAGTCATGAAGGCAAACAAGCACAGAATACTCAAATCTCCTTCCCACTAACTCATACTCCTTTCACGATGTTAAAACTGAGTATCCTCTCGGCTCTCCCTTAAATAATAGCATTTGTTGAACACGCTATATCCCAAGCATTGTGCAAAGTATTTTACAACGTATCAGCTCGGTTGACCCCACCAGAGATGCTTGTGCATGCATCAAGGTCAAT EMBV3_01369 CTGCCCCTGGACACCTACGTGCAGAGCCCGTTCTCCCTGGGGATGGTGGAGAGGTTTGCA Variant GeneID:613571|MGC152007:NM_001076278:219_cdna 240^338 2 EMBV3_06563 GeneID:613571 26 GENE MGC152007 NULL protein fucU homolog EMBV3_20900 CCTACACGTGCTTGGGTTTGCTTCCAGAGCTATTTCACCTGTTGTGAGACGAATCTTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23755 GCATTGCCAGCCTCATCCCGTACCACCATGAGACAACTCAGGAAGAGCATAAGTGCGTTT Gene GeneID:616608|DNAJC5G:NM_001076429:228_cdna Constitutive 0 NULL GeneID:616608 11 GENE DNAJC5G NULL DnaJ (Hsp40) homolog, subfamily C, member 5 gamma EMBV3_02403 CCGTCTGTGTGCCTTGATGGCTTCTGCTTCGTGGGTCACTGGTTTTGCCAACTCCTTTTT Gene GeneID:526989|LOC526989:XM_002697454:63_cdna Constitutive 0 NULL GeneID:526989 23 GENE LOC526989 NULL similar to hCG1805526 EMBV3_00750 GTGGCCTTCTCCTGCTCGTTGCCTCATTTCCACTCACTCCTACACACACTTCTGCTGAAT Gene GeneID:511741|LOC511741:XM_002691545:29_cdna Constitutive 0 NULL GeneID:511741 11 GENE LOC511741 NULL similar to olfactory receptor 355 EMBV3_34002 AAGCCTTCTCCACCTGTGGCTCTCATCTGGCAGGTGTTTGCTTATTTTATGGAACAGGCC Gene GeneID:530825|LOC530825:XM_002688813:243_cdna Constitutive 0 NULL GeneID:530825 7 GENE LOC530825 NULL similar to Olfactory receptor 18 (Olfactory receptor 145-1) (Olfactory receptor TPCR34) EMBV3_38765 GAAGTTAGCCGCCGAGAGTGCCAAGGAGCTGGTGGAGATTGCGGTGCCTGAGAACCTGGT Gene GeneID:537783|NOVA2:XM_002695174:814_cdna Constitutive 0 NULL GeneID:537783 18 GENE NOVA2 NULL neuro-oncological ventral antigen 2 EMBV3_13559 TCCATACAACAAGGTTTGCACGTCCCACACCCCAGCAGCCAGTCAGGGCCTCCATTACAT Gene GeneID:616740|ZMIZ1:XM_002698888:24_cdna Constitutive 0 NULL GeneID:616740 28 GENE ZMIZ1 NULL zinc finger, MIZ-type containing 1 EMBV3_34654 AGCAATGTTGGAAATGGATATGTGAGCTGGTTCCAACAGATCCCAGGATCGGCCCCCAGA Gene GeneID:100336586|LOC100336586:XM_002694642:2_cdna Constitutive 0 NULL GeneID:100336586 17 GENE LOC100336586 NULL immunoglobulin iota chain-like EMBV3_22858 GCGGAGCTCTGCGGACCTTCCTCGAGCGCCAGGTGGCCTTAGACATGCATCTGCCAGCAT Variant GeneID:534354|MTRF1L:NM_001046378:12_cdna 190^562 5 EMBV3_16937 GeneID:534354 9 GENE MTRF1L MGC137648 mitochondrial translational release factor 1-like EMBV3_20919 AGTGCATGGGAAGCTCAGGATGCAGAAAAGCTGCCAGGCCGCAAGTACCGCGCCGGGTAC Variant GeneID:338060|NDUFA10:NM_176655:2_cdna 799^918 2 EMBV3_35270 GeneID:338060 3 GENE NDUFA10 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa EMBV3_11261 ACGGCTACAGGACGTCTCACAGCCTTCGCATTTAATTCAGTCCAGACTACAGGTGCCAAG Gene BVT0102_269405 + 1 EMBV3_16124 GK000012.2:24926478-25129698 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16389 CCTGTGGATAGCCAACGGAGGACTTTGTCACCACTGGATTTCTTCATTTGTCCCCAGCTT Gene GeneID:781555|ASTN2:XM_002689954:11_cdna Constitutive 1 NULL GeneID:781555 8 GENE ASTN2 NULL astrotactin 2 EMBV3_42103 AAGGGCCATATACGACAAACCCACAGCAAACATCATTCTCAATGGTAGAAACCTGGAAGC Gene BVV0101_001919 + 0 NULL GK000011.2:4321376-4335799 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24142 CCCATGAGCATGATAACTCTTGGCACTTTTCCTTGAAGAAAGCACTTCGACCTGAATTTG Gene GeneID:514023|ZNF180:NM_001075644:211_cdna Constitutive 0 NULL GeneID:514023 18 GENE ZNF180 MGC151525 zinc finger protein 180 EMBV3_36103 AGCCAAGCTCATCAATGGCGGCATCGCCGGCCTGTTTAAGGAGATGCTGGCGGGCTGCGG Variant GeneID:504371|SLC25A22:NM_001075159:233_cdna 174^422 1 EMBV3_27315 GeneID:504371 29 GENE SLC25A22 MGC142774 solute carrier family 25 (mitochondrial carrier: glutamate), member 22 EMBV3_37367 CTGGTCTCCGCCGTCTGGAAGGAAAGCCAGAGCACGTTCGAATAGCTGAATGGACTTTTT Gene BVT0102_405167 + 0 NULL GK000013.2:54794455-54805021 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35801 GGGAGTTCCCGTCCATGCTGGCCCTCTCTGGTATCTGCGGGATGGTGGCCGTCTCCTGGT Variant GeneID:514998|CLDN15:NM_001046186:182_cdna 460^624 1 EMBV3_33965 GeneID:514998 25 GENE CLDN15 MGC137177 claudin 15 EMBV3_09999 ATCCACAAATAAGAACATTCACCGTGGGTCAAACAGAGCAGCAGACCCGGGATAGTAGCC Gene GeneID:282467|S100A12:NM_174651:37_cdna Constitutive 0 NULL GeneID:282467 3 GENE S100A12 NULL S100 calcium binding protein A12 (calgranulin C) EMBV3_16272 TGAACTTCCTAACTGGGAAAACCCTTTAGAACAGGGAACTGGGAGACAACTTGGCCCAGG Gene BVV0102_085831 + 0 NULL GK000002.2:135810605-135812787 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104234 TCONS_00104237 TCONS_00104235 TCONS_00104232 TCONS_00104231 TCONS_00104233 TCONS_00104236 1 XLOC_062326 Coding TCONS_00104232 XLOC_062326 Coding Coding RCC2 2:135779972-135811680 = TSS77232 3621 1 TCONS_00104232_3 520 13 0.886208092850159 0.000245756492251505 1.47946096983237e-05 0.000266525447802247 4.04188069511345e-05 0.000148908783235081 4.51884453750537e-05 6.3107796824729e-05 5.85371378492629e-05 0.000118060488507738 0.000170668989052856 0.00103933001547888 0.000299633402544397 7.49895798210538e-06 5.85201324831765e-06 3.44943120898374e-10 0.0301123149745245 0.0203506469253105 0.0193732890901457 0.000106390706763625 3.8699825247864e-35 9.77013098589543e-05 0.0128860412723694 0.0101812906387737 0.0115190134361625 0.000636806657323852 0.000292467124062323 2.55557888243758e-05 0.00348723095389279 0.00258147244557364 0.00620566316059483 NM_001101911.2 RCC2 Bos taurus regulator of chromosome condensation 2 (RCC2), mRNA. 0.0 6493 99.70 0.99972383319525 NM_001136204.2 RCC2 Homo sapiens regulator of chromosome condensation 2 (RCC2), 0.0 2572 88.69 0.551228942281138 TCONS_00104232_3 sp|Q9P258|RCC2_HUMAN RCC2_HUMAN Protein RCC2; 0.0 1005 97.32 0.998076923076923 2 coding 1 1 1 1 -0.0362106498653015 0.80208669870982 0.00233372119013524 0.96267176804658 GCCTCTTGCTTTTTCTGTCCCGTGTCTCCTCCAGCGCGACCATGCCCAGGAAGAAGGCGGCGGCGGCCTGGGAGGAGCCGAGCTCGGGCAACGGCACGGCCCGTGCGGGGCCCAGGAAGCGCGGCGGCCCGGCCGGCAGGAAGCGCGAGCGGCCGGAGCGCTGCAGCAGCAGCAGCGGCGGGGGCAGCAGCGGCGACGAGGACGGCCTGGAGCTCGACGGGGCCCCCGGCGGGGGAAAGCGCGCGGCGCGGCCCGCGGCGACCAAGGCTGGCGGCGCGGCCGCGGTCATCACCGAGCCCGAGCACACCAAGGAGCGCGTCAAACTTGAAGGGTCTAAGTGCAAAGGGCAGCTTCTGATTTTTGGGGCGACCAACTGGGACTTGATTGGTCGAAAAGAAGTGCCTAAACAACAAGCTGCTTACCGCAACCTGGGTCAGAACCTGTGGGGGCCCCACAGGTATGGGTGCCTGTCGGGGGTCCGGGTGCGGACGGTGGTTTCGGGGTCGTGCGCCGCGCACAGCCTCCTCATCACCACGGAAGGGAAGCTGTGGAGCTGGGGGCGAAATGAGAAGGGGCAGCTGGGCCATGGCGATACCAAGAGAGTTGAAGCCCCCAGACTCGTTGAGGGGCTCAGCCACGAGGTGATCGTGTCTGCGGCGTGTGGGAGGAACCACACCTTGGCCTTGACAGAAACGGGCTCCGTGTTTGCCTTTGGAGAGAACAAGATGGGGCAGCTGGGCCTCGGCAACCAGACCGACGCCGTCCCCAGCCCCGCGCAGATAATGTACAACGGCCAGCCAATTACCAAGATGGCCTGTGGGGCTGAATTCAGTATGATAATGGACTGCAAAGGAAACCTCTATTCCTTTGGGTGCCCTGAATATGGTCAGCTGGGACACAACTCGGACGGCAAGTTCATTGCCCGGGCGCAGCGGATAGAGTATGACTGTGAGCTAGTGCCCCGGCGTGTGGCCATCTTCATCGAGAAGACAAAAGACGGCCAGATCTTGCCCGTCCCGAATGTGGTGGTGCGGGATGTGGCCTGCGGCGCTAACCACACGCTGGTCCTGGACTCCCAGAAGCGGGTCTTCTCCTGGGGCTTCGGAGGCTACGGCCGGCTGGGCCATGCCGAGCAGAAGGACGAGATGGTCCCTCGACTGGTGAAGCTGTTCGACTTCCCGGGGCGTGGGGCGTCCCAGATCTACGCTGGCTACACCTGCTCCTTCGCCGTCAGTGAAGTAGGTGGTCTGTTTTTCTGGGGGGCCACCAACACGTCCCGGGAGTCCACCATGTACCCGAAGGCCGTGCAGGACCTCTGTGGCTGGAGAATCCGGAGCCTAGCTTGTGGGAAGAGCAGCATCATCGTGGCTGCGGACGAGAGCACGATCAGCTGGGGCCCCTCGCCGACCTTCGGGGAGCTGGGCTACGGGGACCACAAGCCAAAGTCTTCCACAGCAGCTCAGGAGGTGAAGACGCTTGACGGCATCTTCACAGAGCAAGTGGCCATGGGCTACTCACACTCCTTGGTGATTGCAAGAGACGAAAGTGAGGCGGAGAAGGAGAAGATCAGGAAACTGCCAGAGTACAACCCCCGGACCCTCTGACGCCCCGGAGCCCCCACTCCACACCTCTCGCGGCAGCTGGCATGTCCACTTGCACTGGGACTGGAAGTCAAGCGAGGAATTTCAGAAGCAAAAGTTGACCGAAGGTGCATTTCTGTTAGACTCCCTGAGGCTCCGTTTTATAAGTGATTCAACGCCAACTACCTTTTCTGTATGCTTTCCAAAGTGGGTTTTTTTTCCCCCTCCTCAATGTTTAATTAAAATATTTGCTCATAGTTGACTTACCATTCCTACGAAAGAGGCAGAAACTTTGAGCAATCTAGGCTTTTTTTTTTAGGCCCCCCCCCTCCCCCACCCTGTACACTTCTCAAAAACACCCCTTTCCATTGTGGTGAGCATTGTGAGCCCAGCGGGTGCCGCCTGGCACAGGTCTCCACGTGCTCAGAAAACACATCAGCCGTGGGGGGCAGCCCGGTTCCCGCGGTCCCCGCCGCCTTCCTGCTTCTCCTTCTAGACTGGCCGCGTGCGCTCTGCTCTTCCCCCGGCCGCCTGTAAGCCCGTTGCCTTTTGGCTGTGACATTAATAGAACCTGCCGTTTCCCCCCCGGTGGGGGCTCGTGGGTCTGTGTTTAGCCATTTATATCTACTTTAGGTGTCAGAGAAGTCCAAGTGAAAACCAGGTGATCATGGAACCAGTGGGGACTTGGGGGTGGACAGACGTGGTTCCAGAGCCGGGGTCGCCTCGCCAGTGCCTGCCGTCGGCAGCTGACCAGCAGGACAGTGCGTTCTGGAGTCCCCGCGGAGGAGGCTCATCCTCTGTGTCCCGGCCTTTATCGCCTTCGTGTTTCTGTGTTTATCCCGAGCCCCTGGCTGGATCCTGCTGGAACAGCCCAGTCTGTTTACGAGGCCCGGGTTCCTGCTCCATGAACCCAACTCTCTAGTCACATTTGCTTGGCTGTGCTACCAAATAGTTGGGATCGTGGAAGAAGTCCCCTTCCCCGAGTCAGCGCAGAGGCTGCGACCAGCTCCCCACAAGTGCCCTGCGCACCAGCATGTCCCTGGCGCTGCCTGAGTTACGAGGTGCCTTTCCCGGAACCCTCCTCTTGCTCGGACCCGAGAGAGGCGGCGGCTGTGGCCAGGTTCTTGGTTTCGAGAGGGTCTGGACTGGTTTGGGTGCTTTAAAATAGCCGTTTAGGTCAGTGGTGCTTGTGGGGAGACGGGAGAGAGGTGCAGTGTGAGATTGGGTGGAAGGGAAAGTTCAATATTGGTCTTTTTTATTGTTTTTTTTCTTTGCTTTGCTCTTGTTACCATTTTTGTCTCGATGTTAAAATGCCAAAAATGACTAGTCGTTGCTTTTCCTCTTCTCTTCCCTCCCGCCCCATCGCTCCTGACGGTGGCTCCCTCCTCCACGGGGATGTGGTCGCTCCTGTCCTGGCCAGTCCTGAGGCCTCGTGGCAGGAGGCCGGCCTGCACCTTTGCTAAGGTTTAGTCTGACTTCACGCTCGTCTCTGCTGTCTGTGTTTATAGTCCAGGGGAGAAGCTTCTGCAACTCCAGAGCTTCTGCTAAACTAACCTGATTGGTCCAAATCACCCTCTAACCACCATCTCTGACTCAAGCCTCCCCGCGTAGAGCCCCTCAGTTTCCCCCGACAGAGCTCTTCCTGAAGCGGGCCTGGCGCCCGCGCTCCTGGACAGTGTGCGGCTCCCTGGGGCTGTGCGCCCACCCGGGTCCTGGCCCCTTGCCGGGGCTGGAGCAGGAAAGGGACGTCCCCTCCACATGAGGCTGCCCCGTTCTCTCCCAGTCACTGCTTGGAGCTCAGAATTGTAAAATGAACTTCCTAACTGGGAAAACCCTTTAGAACAGGGAACTGGGAGACAACTTGGCCCAGGGAGCGGGTGCGGCTCAGGAAGGAGACGTCGCGGAGCCTGGGCGTGAGGGGGAGCCCAGGAGGAGGAGGTGGTCCGGCTGAGGTGCCTGGTTTAGTGCTGTAACTGTCTTTTTTATATATATATTTCTCGGAGTAAACATTTTAAATAAACGGCATCGTTGTTTGCTCTGT EMBV3_03613 ACATCCTGGAGCCCGATGCACCGGAGCCAGGCGCCTGCGGCAGCCTGAGCCCAAAACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08519 TGTGAAGACATTGGTGTTGAACCTGAAAATGTGTGACTGCACAGAAAAGTTACAGAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38861 GGTGACCTAAGCTGCAATTTCTAGGGAGTGATTTCATATTTAACCTGGGCCTAAAGCAGC Gene BVT0102_006569 - 0 NULL GK000010.2:58646810-58662506 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017398 TCONS_00017399 TCONS_00017400 TCONS_00017401 1 XLOC_009021 Coding TCONS_00017399 XLOC_009021 Coding Coding TMOD2 10:58655904-58711813 j TSS11896 7722 1 TCONS_00017399_2 351 0.135716135716136 11 0.862076983615941 0.000614912878633285 0.000911805562803263 0.000200531469741239 1.18339193260982e-10 0.000780726196695926 0.000572771607512464 0.000668383393495842 0.000440481107246456 0.000339425400165095 1.25773240713117e-09 3.96146277128008e-05 3.04308366045009e-30 0.000112773576889533 2.34872499194336e-234 0.000353857070090893 0.000493605123765933 0.000112414050958699 0.000143242184409639 0.000481105077135505 0.00105045035331652 0.000253754686111697 5.48669787483959e-16 0.000235722123307856 0.000326908556163459 0.00089318211659624 0.000953557241836632 0.000429332909823478 2.2893081503902e-32 1.5375223161335e-05 0.000116112572353546 XM_005211827.1 TMOD2 PREDICTED: Bos taurus tropomodulin 2 (neuronal) (TMOD2), transcript 0.0 1.077e+04 100.00 0.772856772856773 NM_014548.3 TMOD2 Homo sapiens tropomodulin 2 (neuronal) (TMOD2), transcript variant 0.0 2765 73.91 0.571872571872572 TCONS_00017399_2 sp|Q9NZR1|TMOD2_HUMAN TMOD2_HUMAN Tropomodulin-2; 0.0 686 97.15 0.997150997150997 1 coding 0 0 1 1 -0.0713095666893074 0.699725252517879 0.00915569732153364 0.865830891432803 CCGGGCCACGGCGCCGCCCTGCTCGCCGGCCCCGCTACTTCGGGGTAGACGGACTGACTGCCCGCACCGCCCGCTCCGGGATGGGCGCACGCACGGTATTCTGAAGTCTTAGGAAGCTGGCACAGTTAAATGTTCGTGGCCCATGAGAAAGGCATATAAGAAACCATGGCACTCCCTTTTCAAAAAGAGCTGGAGAAATACAAGAACATTGATGAAGATGAGCTTCTTGGCAAACTCTCAGAAGAGGAACTGAAACAGTTGGAAAATGTTCTTGATGACCTAGATCCTGAGAGTGCACTGCTGCCAGCTGGATTTCGACAGAAAGACCAGACACAGAAAGCAGCCACGGGCCCGTTTGACCGCGAACACCTCCTTATGTACCTGGAGAAGGAAGCTTTGGAGCAGAAAGACAGGGAAGACTTTGTGCCCTTCACTGGAGAAAAGAAAGGGAGAGTCTTTATCCCCAAAGAAAAGCCCATAGAAACTCATAAAGAAGAAAAGGTGACCCTGGACCCAGAACTGGAAGAAGCTTTGGCCAGCGCCTCCGACACTGAACTCTATGACCTTGCAGCTGTTCTTGGAGTACACAATTTGCTCAACAATCCCAAGTTTGATGAAGAAACAACCAACACAAAAGGTGGCAAAGGGCCTGTGAGAAATGTGGTCAAAGGTGAAAAGGTCAAGCCAGTATTTGAGGAACCACCCAATCCCACAAATGTGGAAGTAAGTCTACAGCAGATGAAAGCCAATGACCCCAGCTTGCAAGAAGTCAACCTCAACAACATTAAGAACATTCCAATTCCAACCCTGAAGGAATTTGCAAAGGCTCTGGAGACCAACACTCACGTGAAAAAGTTCAGTCTGGCCGCAACCCGCAGCAATGACCCTGTGGCAATTGCCTTTGCAGATATGCTAAAAGTAAACAAGACCTTGAAAAGTCTAAACATAGAATCCAATTTCATCACTGGTGCTGGGATCCTGGCTCTTGTAGAAGCACTGAAGGAAAATGACACGTTGATTGAGATCAAGATCGACAACCAGAGACAGCAGTTGGGAACAGCCGTGGAGATGGAAATTGCCCAGATGCTGGAGGAGAATTCCAGGATCCTCAAGTTTGGATATCAGTTTACCAAGCAAGGACCACGAACAAGAGTGGCAGCTGCCATCACAAAGAACAATGACCTGGTTCGTAAAAAGCGAGTTGAAGGAGACAGAAGGTAAACTTCCACAAAAAGAGGCGAAGTTTCCCCACGGCAGCAATTTAAAAACAGAAGCTCTTCTCCTTCTTCACTGGGACCATTTTATCAAAGGTGTGGTATGTTGGAGCCAACTCATACAGGTTTCACCATTATTAAATTATCAAGAATTTTGAAAACTGGTTGCTAAGCACAACCATTATTAAAAATTAAATGGCATGCACTTACAATTAAATAATTATATATAAAAAAGTAATACTCAAAAATACATTTTGCCATTTTCGTACTCTTGAGATTATTTGCACCTATTGTGTTTTTGGCACACATTTTTTTTGGCAGAAATACTATATCGTGGTATGCTATTATACATCTCTCCCCAACTCGCTAGTTCTTCCCAACTAAGAAGTTCCATACTTCTTGTTGGTAGTTTGAAATTGATCATGGCATGGAAATTGATAAATGTTATAAATCAAGACTTTCCCCTATCTCACCTGTCCCCAGGTTGCTGGTTCATGCATCTACCATCAGCATAGCACTGGGTAAAATGTATAGTTTTTCTTCTTTTTTTTTTGTTTTTTGTATACATGTTTTGGTTACCATGTTGCCAAAGGGAAGAACATTTCTGTTTCTCAGTTGTCTTTCTCCTTTCCCTTCAGATTTGTTGCAAATATATTCAAGTGCAGAGTCCCTGACATGCCCCACTAAGTAAGGCTTTTTCCTTTCTGCTCTCATTTACTCTCTTTCTTGCTTTCTCCCCTAAGAAATCTTGGATCCTACACAGAGTATTCCCTGCAGCCCCAAGATACTGTTGTCCCGAGGCTAAAGGCAAACCCTGGCAGGAAGAAGGAAAAAGGTCAGGACTTGATGGTGACTGTGCTGCAGTTGTTGATAGTATTAAAGCAAAATAATGGGATATTGTCAAAACTTAGCACTGTTTTTAGCTTACAAAATAGTTAGGTCAAATGTATATAGAATCTATTAAATCAAATATTTATTACTAATCAACTTATCATTACCTGTGTTTTTGAAGTAGCTTTAAAGGTGGCATTTCCATGAGTATTCACTTAACTATTAGAAGATAAACTTAAATTTAGAGGGCCTATATATCATTTAATTAACCTAGGACTTCATTTCCCCATCTCTGCAGTGTATGTAAGTAGAAGTTCCTTCGTGATCCTGAGCATGGTTATCCCTTACCATCCATCATGGTGGAGCATAATGTATATACAATATCTTTATGCATATGCATTTTGTCAAATATTATGTCAAGATATTTGGCAGCATCTGGACAATTGATTGAAGGGAGGTCATCTTTCCCCAGACCACCTCCTTTCCCCTGTTAGACTTGTACAGGCCCACCCTAAGTGTAAAATCATTCACCTGGACTTACAGGCTCCTGTCACCAACACCCATCCCAGCATATGTGGAAGATAACTTTTTGGAGATATTCTGGAAGTCTAGAGAGATCATGTCATTAGTCCAGCACATCTCCCCATCTGCCAGAAGTGTGTAATGAAAGCTGCTTTATCCTCATCAGCACGATTAAATTCCTGCCTTTCATCTTAGTAGGGCATAATGTAAATAAATGTCATGTGAGTGTGTGTGTGTTGCCAAATATCTACCTGGGTATTTGGCTGCATCTGGACCACTGATTGAAGGGAGATACTCTCTCCCCAGCCCCATTTCCCTTGTTCTTTTTAGAGCTGCTTTAGGCCCAGGTTAAATATGAAATCACTCCCTAGAAATTGCAGCTTAGGTCACCAACCACCAAATTTCGTAGCATTATGGAAGATAACTCTTAGGGAAGCTTGGAAATCATTTCATTGTTCCAGCACCAAGTCTCTCCATATGCCTAAAGTGTATGAGTGAAAGTGTTTTCATCTCCATCAACATGCTTAGGCCCCTTCCTTCGATTTTTGTAGGATATATTGTATATAAATATTTTGTACATTAAAGATTGCCAAATACTATAAAGGAGGTATTTGGCCAAAGCTGGACTCCTGAGTGAAGGGAGATGCTGTCTCCCAGCTCCTCTCCCCTCTCCTCTGTCAGAGTTGATGCGGGCCTAGGTTAGGTAGAGAATCGCTAACCTGAAGGGGCTCGTGCAACTCACCCATCTTAAAGCACGCACTTCATCTTACAATACAAGCCCATCTCCATTTAAAAACTCACAAAGCATCCCAATGCCTATACTCCTCAAAACAATTTCCGTAAGGGAAGCCTGGCACATCAAATCAAAAGAACGGCTGCTTCCCTTCCAGACAGAAATGTGGCCCCTGGCAGGGCACCAGCATTAAGGAAACCAGTGTGTTCTGAATAACTGCCATGAGAACATTTCAGTCAATCCTGAAACCGATTTAAGCATCAACATGCTTTAAGTGTAAGATAGCCCTCTAAAAGTTCCAAGAGTTTGAGGATATTTTCCTTTTTTGTGGTCATGATGTACTTAGCCCTCTTCTAGGCACTGTGAAGGAGACAGGAAGTGTAAGACTATTATAATTTGACCTGTGCTTCTGGGTTTTGGGGTAGAGTGCTCTTTTGGAAAGTAGATACCATTTTTTAGCTCAAGTATTGATTGCATATGTAAAAACTAGCAGGGAGCTGTGAACACTGGGTTCTGTGCTGTGTTACCTATCCCCAGGAGAACTATTTCTGGAGTTGGGTTTGAAATCATGATTCTGTAGCTTCCTTCTTCTCTTCCACTAATGAAGCAATGATAGCTATATTCATTGTAATGAACAGAGAACTAAGAAATATTTTAGCTTTGCCTTCCAGTAACAGTAACAATTTCCCCTTATTGCTCCTAATTTAAAACATCCCTGCCACTCACTGTGCCATCCTCAATACTCAAGGATGGAGACACATGCAAAGGAAAGGTGTGCGAATTCTTGGGAGCATCAGGCGTGCCCTCTGGATGAAAATCACATGATCAGGCCCCTGGTAACAAGCTGGAGAGAGAAAAGGACCCAGAATTTCAAGGATGTAGTCACTGTTCTTGCTCCCAACTCTAGGTCAGATCAAATTTTGTTTTGTGGTTCAGGAGTTTAGTAGTGTGGAGGGGCTAGGTGCTGTGGAGAAGGTAGATGGAAATTAATGTTTTTCCCTTGCCTAAGGGTAGAAGTAAGCTCTGCTCAGCTTACCTCTTTCTCCTCTGCCCGTAACAGCTATGATTAAACATTCAGAAGATGGATGGAGGAGGAGTGGCAAGGTTTGAATTTATAACCTGCCTGTTCTAGGAAGGTTGTACACATATCAGAGGTTATCCCAGTTCTGTGATGCATCGTTGACCTGGAGGAGGGTGAAGGAGACTAGACTTTTCTCTGACATCTTCCATGGTAGTCATTCTGAGCACATTGGCTCTGCTAGTTGGTATGGTGGAAGGGCACCATACTAACAGATTTGGAGACTGACTCCTAATCCCATCACCAACACTTAGCAGGTATATGATCATGGGCAATTCATTCAATTGCCTGACAATTATAGACTATATAGGGGGAAGAGCACTGGATTTGGAGTCAAGACACTTGACACTTGGCTCCATACTTTCTTAGCTGGGAGACTATGGGGCAAGTCACTCAGTCTCTCAAACCTAAGGTTCTTCAGTTATACTATAATGGGAATAACCTTCACTAACTACCTCACAGAGTTGTGGTGAGAATATATCAGCTATTGGGATGAAAACACGATACTGGAAAGGGCTATACAAAAGTGGGAGATCATTTTTTATTATCGATTCACTACTGTTTTCCACTGCCTCTTGAATCTGTTTTCTTCTAAGCAACAACTACATCTTTCACATCTTTTTGAATACGGGGAATTGAAGCGTGGGTATGATGTCGGGGACTGGAGTTATTTTAGTTTCAACATAGAAGTCGGAGAAGTAGTAGATAGGTGCTGTGGGTGTTAGACATACCAGTGAAGTGTGCATGTGGGGGGGTGGCGCATTGTCCTGGGCCATTTTGACAGCACCCTGGGATATGGTCAGGACCCTTGCAGAGAGCCTAAGGCTGGACACAGGGGGAAACAAACAGTAATTAAGAACTGAGGGGAGGGTCTGGAGCACCGCTGCTCTCCAGTGAGCTCTGTCACTACTCAGGGGGTGGGTTCGGCTAAGGCTTGAGGTGTGATTGGAGGCCTAGAAAAGAAGACTGTCGTTAGGGCCCCAGCAGCTGTGTAACAGGCTTGAGCCCTAAGAACAAAGGGGAGAAACTATCACTTGTGAGGTCAGCTCTCCCAGGCATCAGCTGCTTTGTTATCACCAGCAACCTTAGCCCTGATCAGTATTATTTTCTGCTAAGATATTGAAACATAGCCTCAAGGGACTTTCATAAGCACTGGGAGGCAGGGACTGTCTCATGAATCTTTGCATCTTCAGTAGCATCTAGTAAGGTGCCTTGTACATAATAGGTGCTTAATAAATGTTGCTTGAATCGAAATGTCCTCCAGCCCCGCAAGAATCATGCTCCATTTGCCACCATGTGATACTTTTGGAAAATAAAACTGATTTCGACGTCAGCTCTGTGTGGCTTCCCTAGTGGCTCAGGCGGTAAAGAACCTGCCTGCAAAGCAGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGAGAAGGGAATGGCTGCCCATTCCATTATTCTTGCCTGAAGAATTCCATGGACAGAGGAGCCTGGTGGGGCTATAGTCCATGGGGTCACAAAGAGTGAGACAATTGAGCAACTAACACTCTCACTTTTTTCACTATGTCTGACTTTGGGCGGGTCTTTCATCTAATCTTCATTTCCTTTGTAAAATGAGTGAGTGGATTAGATGCTGTCTAAGGTCCCTTCCAGCTCCCAAATGTTACAATCCTGTGGTTCTCAATGTTTCTGTCACCTGTGAACGTGGGTGCTCTATGCCTCCCTTGTGGCTCCTCCTCTCCTCCGTAGGCTTTGTTCAGAGGAAGGGGTCTGAACATTCCACAGAGCTATTTCTTCCTCTTCAGTGGTTTTTACTGTCTTCAGAATAGTTCTAGAGAAGCAGCCTTTTCAAAAAGGACATTTTAAAATATATTTTCTCCTCAAAATTAGTAGCAAAAGAAAGAAGGAAATGTAAAGAAACTGAGCATAGTAAACATGGCATGTTTTTCATAGATTTTTATTTAAAGACGGAGAGAGTCTGAGCACATATCGACTGAATAATAGAAGCCAATCACACAGTACACTGTGCGACTGAGAGAAGCTTGTCCAGGATTAACGCTTTCCCATGGATAATCTAAATGTGGATAGATAAGAATTGGCCATATGGTGAGATGGATAGAAGGTGTACTTTTAAAGGACATTTTATTTTAGTACCAAATTTTGCCAGTGACAATCTTTAGTTAAGAAAGAAATTCTTCAGAACTAAAATTCTCATCTCTGCCACTTTGCTTTTTAAAAAACCCCATTATATTCATGGAATAATATTTATATTTTAATTGAAACTTTATCTTAATTCTGTTTCATCTATTTAAAGAAAACAAGAGCATTTTTCATTGCATTAAAAAATGTAAAATACTTGCATGCCACCAGTGTGTAATACTTTCCCAGTTCAGATGCTTGTAATATGTGACTTGATGTGTCCCTGTATTATTTTGAAGAGAACAAAGGAAATAATACTTTGTAAGCTGTTTAAACTTATAATGGCAATATTTATTTGGCTAAGTGGTTATTGGAAAATGCACATAGTTTTGTTTTTCACTTTGAAACTTTCCAAAGGTAGATATTGATTATATTCATTAGGGAATTGAAAACTAATTTGCCTTTTAAATGTGAAATTGAACATTTTGTGGGAAATGTGTGAAAAAGCAAAATGTATGAAGCGTGAAGTACTTTTCCCATGATAATTAATAAGGATCCCAGGTGGCATAAATAGATGCAGTGTTTGACTCTTTGGAATTTGCCAGCCTGATCTAACGCTAAGGTAAATGTATACTGTTTTAATTAATCAATATCTTTCTGCTTTTAGAGATAATAATGTATTCATTTGTGTCTGGAATGAAATTTCCAAGTGAAAATGTACAGAATACTAGGAATTAATAAACTTTTCTTTTTAAAAATGAAAGCAAGGACTGATTTAATCTGGATAATTTTAAGACATCTGGTCTTTTTAAAATAAATGATTGGCACCGTGTTCTCATATTAGAAAAGTACATTTGCTAGAAAGGACCTTAGAGTGTCCCTATTATGAAGAAGATAAGAAGTAGACAGACAACCAGAAGTAGCCAGAGGAGAAACAAGACGTTATTATCAAAATGAAAATACACACACACATACAACATTCAGCTAAACAGTTCACATTTGTTACAATAAATGGGAACAAGAATACAGGTAACTCAAAGAGGTTTTAAGTGTTTTACCTTGAATTTTTTATATTAATTTTGGAATTGCTTTCTTTGTAAACTAGGCTGGAATTCAAAACAGGGAACACTAAAAATAACAGTTACATTGTAAAGGTTTGTCCTAGAAAAACAGGAAAACCTATTCTTTCTGCTGCCCTGTTGAACTAT EMBV3_17347 CAAGCTTTAAGTGTTCCAGATCTTACTCGTGCAACGCAATTTCTTCAGACTTCTCCCTGG Gene BVT0102_057630 + 0 NULL GK000005.2:49740886-49812075 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194958 TCONS_00194956 TCONS_00194957 TCONS_00194955 TCONS_00194954 1 XLOC_117887 Coding TCONS_00194956 XLOC_117887 Coding Coding SRGAP1 5:49806917-50077354 j TSS145370 8659 1 TCONS_00194956_6 1022 0.011433190899642 22 0.968062683962194 0.00182043449533694 0.000182713939143721 0.00162501597537031 0.00224299775627262 0.00202165655710145 0.000599328692472438 0.00108606254746832 0.0023581495121666 0.00225541961477914 0.000201934019145014 4.11735463932826e-10 1.10799467823916e-10 0.00021052062313838 0.000402078655572847 0.000456979166933268 6.84882434527011e-08 2.47251208398682e-07 5.92249045780101e-33 0.0020257557123536 0.000219285960211288 0.000910112010200512 0.000251673520628716 2.84763394593633e-09 3.15759436132425e-10 0.00432349120240117 0.00533359561762804 0.00197211889981881 4.16291217730523e-08 8.71984005875404e-06 6.65082655638286e-37 XM_005206653.1 SRGAP1 PREDICTED: Bos taurus SLIT-ROBO Rho GTPase activating protein 1 (SRGAP1), transcript variant X2, mRNA. 0.0 1.412e+04 100.00 0.903915001732302 XM_005269042.1 SRGAP1 PREDICTED: Homo sapiens SLIT-ROBO Rho GTPase activating protein 1 (SRGAP1), transcript variant X1, mRNA. 0.0 5169 88.63 0.463332948377411 TCONS_00194956_6 sp|Q91Z69|SRGP1_MOUSE SRGP1_MOUSE SLIT-ROBO Rho GTPase-activating protein 1; 0.0 2028 96.97 0.999021526418787 5 coding 0 0 0 0 -0.152450214585662 0.303262519696322 -0.0551645583941715 0.253224215100802 CCTGGGTTACTGCAGGGCCACGTGGTCAGTTAGTTTTCTTCTCAGCCAGAAGGCAGGATGCTGCCCTCCTAGCCTGACTCTCTGCTCTCATCCTCTGCTCCTGGGCCCTGTGGAAACCTGGCTGCAGTTGCACTAAATTCGAGCTCAACTGGTAGAACAACAGAAATGCCTGGAGCAGCAGACAGAGATGAGAGTTCAGCTTCTGCAGGACCTGCAAGATTTCTTCCGGAAAAAAGCCGAAATTGAGACGGATTATTCTCGGAACTTAGAAAAGTTAGCAGAAAGATTCATGGCTAAAACAAGAAGCACTAAGGATCATCAACAGTACAAGAAAGACCAGAACTTATTGTCTCCAGTGAACTGCTGGTATTTGCTCCTGAACCAAGTGAGGCGAGAAAGCAAAGACCACGCCACCTTGAGTGACATCTATCTGAACAACGTGATTATGCGGTTCATGCAGATAAGTGAGGATTCCACCAGGATGTTTAAAAAGAGCAAAGAGATTGCGTTCCAGCTTCATGAGGATTTGATGAAGGTTCTCAATGAGCTCTATACGGTGATGAAAACATACCATATGTATCACGCCGAAAGCATCAGCGCAGAGAGCAAACTGAAGGAGGCTGAGAAACAAGAAGAGAAGCAAATTGGCAGGTCTGGTGATCCAGTCTTCCACATTAGACTGGAAGAGAGACATCAGCGGCGAAGCTCGGTGAAAAAAATTGAAAAAATGAAGGAAAAAAGACAAGCAAAATATTCGGAAAACAAGCTTAAATCGATTAAGGCACGGAATGAATATCTCCTAACCCTTGAAGCAACCAATGCCTCAGTTTTCAAGTATTATATTCATGATCTTTCAGATTTAATTGATTGCTGTGATCTTGGCTACCATGCAAGCCTAAACAGAGCCCTGAGAACATATCTCTCTGCGGAGTATAACCTTGAAACCTCCAGACATGAGGGCTTAGACATTATTGAGAATGCCGTTGACAATTTGGAGCCCAGGAGTGATAAGCAGAGATTCATGGAGATGTACCCTGCTGCGTTCTGTCCACCAATGAAGTTTGAGTTTCAGTCTCACATGGGTGATGAGGTGTGTCAGGTCAGTGCCCAGCAGCCAGTCCAAGCAGAGCTCATGCTCAGGTACCAACAGCTGCAGTCCCGCCTGGCCACACTCAAGATCGAGAACGAGGAGGTTAAGAAAACGACTGAGGCCACCCTGCAGACAATACAGGATATGGTGACTATCGAGGACTACGATGTTTCTGAGTGCTTCCAGCACAGTCGCTCCACAGAGTCTGTGAAGTCCACGGTCTCTGAAACCTATCTGAGTAAGCCCAGCATCGCCAAGAGAAGAGCCAACCAGCAGGAGACCGAGCAGTTCTACTTCATGAAACTCAGAGAATATTTGGAGGGTAGTAATCTCATCACAAAACTTCAAGCCAAGCATGACTTGTTGCAGAGGACGCTTGGAGAAGGTCATAGAGCTGAATATATGACTACAAGCCGAGGACGAAGGAATTCACACGCGAGACATCAGGACTCAGGACAGATCATCCCCCTCATTGTGGAAAGCTGTATTCGGTTCATAAATCTCTATGGTCTTCAGCATCAGGGGATTTTCAGAGTGTCTGGTTCCCAGGTGGAAGTCAATGATATTAAAAATTCATTTGAGAGAGGTGAAAACCCTTTGGCTGATGATCAGAGTAACCGTGATATTAACTCAGTTGCTGGCGTTCTAAAGCTCTACTTCCGTGGGCTGGAAAACCCCCTCTTTCCTAAGGAAAGATTTAATGATCTGATTTCTTGTGTCAGAATAGATAATCTCTATGAGAGGGCGCTTCACATCCGCAAACTGCTCCTGACCTTGCCCAGGTCGGTCCTTATAGTGATGAGGTACCTCTTTGCCTTCCTCAATCATCTTTCACAGTACAGTGATGAAAACATGATGGACCCTTATAACCTGGCCATCTGTTTTGGCCCTACGTTGATGCCTGTCCCAGAGATACAGGATCAAGTGTCCTGCCAGGCTCATGTGAATGAGATTGTCAAAACCATCATCATCCACCATGAGACTATTTTCCCAGATGCTAAAGAGCTGGATGGCCCTGTTTATGAAAAATGTATGGCTGGAGACGAGTATTGCGACAGCCCGTACAGTGAGCACGGTACGCTGGAGGAAGTGGATCAGGACGCTGGTACAGAGCCGCACACCAGTGAAGACGAATGTGAGCCAATAGAAGCGATAGCCAAGTTTGACTACGTTGGGCGGTCTGCCAGAGAATTGTCCTTCAAGAAGGGTGCTTCTCTCCTGCTGTACCACCGCGCGTCGGAGGACTGGTGGGAAGGAAGGCACAACGGGGTTGACGGGCTTGTGCCCCACCAGTACATCGTGGTGCAGGATATGGATGATACATTTTCAGACACTCTGAGCCAGAAAGCTGACAGCGAGGCCAGCAGTGGGCCGGTAACTGAAGACAAGTCTTCATCCAAGGACATGAACTCCCCAACAGACCGACATCCTGATGGCTATTTAGCCAGACAAAGAAAAAGGGGAGAGCCACCCCCTCCAGCAAGGCGTCCTGGCAGGACCAGTGATGGCCATTGCCCCCTCCATCCCCCACATGGTCTTTCCAACTCCTCAATTGACCTGGGGTCCCCAAGCCTGGGCAGTCATCCCCGGGGCCTGCTGCAGAACCGTGGCCTCAACAACGACAGTCCTGAGAGGAGGCGTCGGCCAGGCCACGGCAGCCTGACCAACATCAGCCGCCATGACTCCCTCAAGAAGATCGACAGCCCTCCTATTAGAAGGTCCACATCATCAGGGCAATACTCAGGCTTCAACGACCACAAGCCGCTGGACCCAGAAACAATCGCTCAGGATATCGAAGAGACGATGAACACTGCTTTGAATGAACTCCGAGAACTGGAGAGACAGAGTACAGCAAAGCATGCCCCCGACGTGGTGCTGGATACCTTAGAACAAGTGAAAAACTCTCCCACCCCCGCCACCTCCACGGAATCGCTCAGCCCTTTGCACAGCGTTGCTCTCAGGAGCTCAGAGCCTCAGATTCGTCGGAGCACTAGCTCCTCCAGTGACACGTTGAGTACTTTCAAGCCTGCAGTGGCACCCAGAATGGGCGTGCAGCTGAAGCCCCCAGCCCTTCGGCCGAAACCTGCTGTTCTTCCAAAAACAAACCCGACCGTGGGGCCCGCCCCGCCTTCCCAAGGTCCAGCAGACAAGTCCTGCACAATGTAACACCCACCTGAGCATGGTCATCTGGGGTGATGATTAAAAAGAGAAGACGGATTAGTGACAAAAGTCATAGATCCATAACTTGCGTTAGTCGTGTGCTTATAACTGGAGATCTTTTGGCTTTTCTATGTTCTCGAATGTAATGTCTGAGATTAGCTAAATAACACGGGCATTTGTATTTTGTAATTTTTTTTAAATAACTGGACATATGCCATTTTAAAGACAATAGAAACACTTAGACTTACTTGAAAATCCAATGCTGCACCGTTTGTATTGAACACAGCACCGCTCTGCCCTGCACATTGCACAGCGCTTCAGGCTTAGTGTAGCCCGGTGAGTCAGAAACGCCAGCATCTCAAGGCAGGAGAATCTCAGTGCCAGGCCCTGGAGTGTAACCAGTGTTGGTCGGTGGCACTTGGGGTGATGCTGAAAGGTGACAATGGTATTGTTTAGTAGCTGACAGTGAGTACCTCTGATCTCATGAAGCAGGGCTGAGACCAGCCCAGGCTGCGTACTTGCTGTTGTCACAGTGGGCTGTTCCCAGTGGGATTTGCAGCACACTGCCCAAATGAGTAGGATTGTCTTTTTCCTAACAGTCTTTTCCCTGGGCCCAGGTCAAATCTTAGCAAGGGGCGCTAGAACCTCTGCAGTTACTGCACCAACTAAATCTGGGAAAGGAGAGGGGGACAGTCCTCCAGAGCTCCTGCTGGACTCTTCCCCTGAGCCTGATCAGGCCCCGGGAGGGTTTCCAAGTCCATCCGCTGCATTCAGCACAGACCAGAACAGTCTAATTTTCAAGACTTTCTGGTTACCCTATTCTGTCCACTCCTTCAGAGATCTGTTGTTGCCTAGAAAATAACTTCCAGCTCCCGTGAAGCCCTGTGTTTTTCCTCTTCAGCAATGGAGAAAGTGCTTGGTTCACCTGGCCTTCTCTTCCCCTGACTAGAGGATCTGGGTTCCCCTAAACATGCTGCAGAGGCCTCTTGATCCTAAATTGAATCCCCAGCTTCCCTTGCCAGCTGTCTCTTCAAGCTGTGGTCTGGTAAGAGCCAGACCAACGCGGGAAGACGACCCCATGGTTCCAGCATGATCTCCTCCCAGTTGTTCAGCCTGGAACCAGGGCTTGCTTTGTTTTTTCCCAACTGGTCTCTACATCACTCACATAGTCAGCTCCAGTCCATCGGGATCCCCTTTCTCTGACATCCTCACCCATAGTCTTTCTTTAGCCCATATTTATGCTCGGTTTCCCCTCTATCTTAAAAAGAATACCTTGAACTCTGTTTTTTTTTTCTAAGGTACAGATCACCGCTGTTCTATCAGCAGCCACTTATGCCATCTGTAAGCATTGTATCTACTCTGTCACTGAACTTACTGATGAAGAGGGTTGGTTTGTTTGCTTTTGGGGTTCCCCCCCCTAAAAATGGATAGCCAGAACTAATCCCTCTGGAACACTTTGATTTCAAACTGGCAGCCAATCGCATGCCCACCTAAGAGTTACAGTATGGACTTTGATTTCTCAGCTCAATGGGGAATGCATCAGTGTGGAAAAAAATGGGGATCTGTACTAAAACCAAGATCGTTACTTTGATCTCTACCTCAGTTTGCCAGTCTGATCATTCTAATGCAAAGAGAGGTTTCATTTATGAGGTATTGTTACCTTTGAAAATCACACTGCTGGTTGCTTGACTGCAGCCTGATTTCACAAATGGACTAGTGAAAAAAAATTACTTCAGGTATTTCCAGGTATTGTAAACCTCTGAATTTTTGCAACCATCCTTTTTACCCATTTTGATAAAGAGGCCCAGCCCAGCATCTTGTGCAACCCTCCCAACCTTTTCCTTGAGCTTTATTAGTCTTTCAGCACCTTTGGAAACCATGGAAACCCAGCCAGGACTGAGCTCTGAGTAGCACCAAGCCTTCTGGACAATCTTCCCAAATGTCTGGAACATTGAAACTTTTAAGAATAATCTCCCAGTTCTTTCTCGATTCCACTTTGCTCTCTTAATTCTCTGTTGTCCAATAGGGAAACAGAAACAGAGAAAGAGGTGGAAGTAATGGTGGAGGAAACTTTAAATCTTTTAGAAATTAAAATAAAGAAGGTTCTTATAAAGCCACTTCCTTATTTGATGGAAGAGGCATCAAAAGAGAAGAGGTGTTTTGAACTTACTCATTTGGGGAGGGTGCTTGTACAAGCTTTAAGTGTTCCAGATCTTACTCGTGCAACGCAATTTCTTCAGACTTCTCCCTGGTAACCTTCCCCAGTGTCTCGTCCCTTTGGTGTTGACACCTGTGATGGGATGAGGACTGCCTTTCCACCCTCCACATCAGGACTCTCCTGCCTTGGAAGGCAGAGGACACGCTGCTCCAGACCTCAGAGCCTCAGAGGCTGTGCCTTCTTCCAGGAAACAGCTCCTAACCCTCTCCCATCACTCCCTTTCTTTACCTGTCTCCGTCTTCGCTATTACTCTGTTGTCACCTGAGGCTTTTTTTCCCCTTCAATTCCCAGGAAAGGATGTGACCTCAGAGTGAGTAAGGACTCAATAAGGACTCACTTATCCTTACTTTGTTTAGTAAAAGTCTAAGATTCCAAGGATAAGACAAGATGGCCCCTTCACAAAGGATCAAAAAAAAAACACCCAATGAGTTCCTTCGAGGGTTTACCTGCAAGTGGTCCTCTTGACAGCCAAAGTGTAGCCCTCAAGGAATGGGAAGAGAAGAAAGAAAATAAGTTCCTAAAAGATTATACCCCGGTTTTAAGAATCTTATCATAGATCCTCATGTGCAGTTTGGGAAGTGAGTCATTTTGGTGATGGGTAAATGATAGTTCTACAAAGATTACCTGACTCCACTTACACAAGAATATGTATTCACAGCTGATATAACTGAATGTTCACATCCCATCCATAGAACTCACTTAAGTAGATTTACCAAATTGGCCTTTGGGTTTGGGTGAGGATGCTTGCAGTGAATCATTAGCATAGAGTGAACTGTTCTTAAAACATATTTTCTGATGAGTGTTCTGAAAATTATTTCAGTTTGTTGAATGGCCCTTTGTAGAGCTCCATGTTCAAGTTGGGCATAAATGCCATTGTTTAACAATTTTGCACGTTTTCACACAATGTAATCTTTTGATGCCCCTTGAGCAATCCATAGAATAATGTATAGCAGGGTCCCACTTAATCTACTGAAATGAATATAAGCAGTGATCAATGGATATAGAGCACCAAGGGTCAAATTGTATGAGTTTTCTGTCTTTGTTCTTTTGCCATTCCCAAAAATGGGTTCATAATTTAAGAAAAAGGAAATTAAAAAAAAAAAACCAGGGACATGGAGGCCTCCTTAGTATTTGGGAATGAGACATAGCCTCTAGGGTCTATAAACTAAAGAAACTTTAGTTTGGTAATTACAGTCTCTGAAATCCAAAGTTTAAGAGCCTATGGTTCTGTTGGGTTTGGAAGACTTCAGATTTGGGATGTCATTCCTGACCACAGTAATGAGAGGCCATGAATGCAGGAAGTGCGCTGGGGGCTGAGTCTCGGCTCTGAGTTACTTCCCATGGAGACTTGGAACTGTGGGGCAGCTTAGAAGTGGAGACTCTTCCCACAGAGCTCCCTAATGGAGGCTAGCACCTGAACTAAAAGCCAACCTCCAGCTGGGCTGGGGTGTCAGGCATGGAGCAGGGTGACTCTGGCACAGCTTTGTTCAAATCAATAAAACAAACTGGAAATTGAGCTTTCACTTACCCACCCTAGTATACTTTCTTTTTAAAAAAAAATAGAGTCTGTATTATAATCAAAATGGTACCTGTATCTTAAAATTACGTAGGGAATTTTGTATGTTTAAATAATTGTACTGGGTTCCATAATGCTTATCTTAGAAACTGTTTAGTAAAAGAAAATATATAAACCGTGCATTTGTGAATGCCCCCCTTTAGAACATTCTTCCAAGTTCAATGTATAGTGTGATGGTTATTATAGACGTTTAAAGTATAGTAAGTGGCTGTGTGACAGGAGAGACTGCTATTTACCTACTGACTTAAGAGTTAACTCCTGCCCACGTAATTAAATCAGTATTGTCCTTTCCTGTTGGTTTGATCAGTTGCAGTACTGGTGGCTTCCTGCTTGTGACTGTTACCTAATCGTGTCAATGTACATCTGTAGTATGTACATGTGAAAGTGCCTTTCTATTTTAGGAGTCTTAGCCTTGCTCTTTACTGTTGCCCCACACACTTCTGCCCGACACCCAATTCCTCGCCCACTTGAGTGTTTTGCAACTTAACTCCACTCTCTCCCAGCTTCCTTTCTATGCCTCGGTGCTCAGTATTGTCCCGTCTTGCATCCTCGTCCGTCATGGTCAGGTCATGGTCATCAGACATCGTTTTCCCCTTAGCCGTGACTGTGCCTTTCCCTCCCTACAGTCACTCTCTGGGTCCCCGACACCTCTCCCGCTCACGAGCTGCTGATGGCCATCCTGTCCTCCTCGGCTCTGTACTGCCTCTTACCATGACATTTCCTTGTCTCTGAGGTGAAAGTAAAGGGGGATGCTTTTCTAGTTCTGGAAGGGAAAACAAATGTTTTGTTAATCTGTTGTGACAATGCACTTTTCTGTATAGTACTGTACATTTTCGCATGTACCATTCCAGGCTTCGGTATCCAGTCAGGTCTGTTCTCCACGGTGTACCTTTATAATAAATAAGATAGTGCTGGCTGCCTTTGTCTGCTTCCAGTCGGGTCTGATTCTCTGCACTTTTCCATTTCTTTTTTTCTTGTCACTATTAACCCTTTAGAGAGCTGAGTTGCCTTGAATTGTTAAATCACGTGAAACTACCTTTCTTTTTAATGTTTTTCACCTCACTTTCATTTTTGTTTGTGAATTTGAAAATGGCGCCTCATTCACAGGGCTTTGTCTGTGAAGCCAGGGTTTTTTAGAATAGTTTGGAGACCCCTGTGTAGTGAGAGAACAGGTCAGGAGGATCTTAAGCGGCTGAGAAAGCAGTCCTAAACATTCTAGATTGAATTTTCTCCTTTAGAAGGAAGTTTTGACATGGTCAACCTTGTCAAGCTGACTTTGGGATTCATTTGAATATGCAGAAATGCAATCCTCAGGTTTAGACTATGTTTAGAGTTCCCCCACGTATAGATATTTTACCTTCAGTCTTACCTTTTTTTGCCCCGAATTCTTGAGGACTACCAATACATAATATAGCTTTGTAAAACTGTATCAGTAATGTGCAGATTGTATCAGCAAAATGTCAGATTGGAACAGTTATGAGATGTAAAAAAAAAAATGACATAAATGGAGGGGAATAAACTTTTATTGAAGCATAAAATACATAGAGAAAATTATAGAAATCATTAGCATAAGAGTTTTCACAAAGTGATGCCCTATTGCATCCACCCCCAGATC EMBV3_17219 TTCTTGACTCCCTGAGGCTATGACTCTGCACCCTTCCGTGCAAACAGGAGCAAAGCACTT Gene GeneID:615205|HAL:NM_001105440:67_cdna UTR3_Alt 2 NULL GeneID:615205 5 GENE HAL NULL histidine ammonia-lyase EMBV3_28770 AGAGGGACCTACGAATTCGGCAGAGAGGGAAGTGCATCCAGCCTTCAATCCACCAGATCT Gene GeneID:785964|LOC785964:XM_002691042:432_cdna Constitutive 0 NULL GeneID:785964 10 GENE LOC785964 NULL hypothetical LOC785964 EMBV3_34703 ACTGTTGCAGCAGCTGCAGCTGCAGCCACAGCCTGTTTCCCGTAAGGCTGTACATAGTCC Variant GeneID:613304|SNRPB:NM_001034731:1261_cdna 558^833 1 EMBV3_43411 GeneID:613304 13 GENE SNRPB NULL small nuclear ribonucleoprotein polypeptides B and B1 EMBV3_36035 CAGTGCAGATCTCATCACAGATGTGGACACCTTCTATGCCCACACTGCTGGCCCAACTGT Gene GeneID:100139581|CRTAC1:XM_002698483:545_cdna Constitutive 0 NULL GeneID:100139581 26 GENE CRTAC1 NULL cartilage acidic protein 1 EMBV3_42400 TGGGGGGGAGAGACCAAATGGCAGATGAGAAGGCGACTGCAGCTTCATCCTGAAAGTTTC Gene GeneID:534811|ZWILCH:NM_001102179:215_cdna Constitutive 0 NULL GeneID:534811 10 GENE ZWILCH MGC157120 Zwilch, kinetochore associated, homolog (Drosophila) EMBV3_25308 TGAAAAACAGTTTACCGATCTCAAGGATCAAGTGAAAAGCTTTTGTTATATGATACAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31742 CCTCCTTCACCACCTCTAGGACAAAGACCATGTCTGTCGGTTTCTTGTGTTCCCAGCAGA Gene GeneID:100337404|LOC100337404:XM_002684816:233_cdna Constitutive 0 NULL GeneID:100337404 1 GENE LOC100337404 NULL hypothetical protein LOC100337404 EMBV3_14368 GAGGGTGTTAGTGATTTCTAATCCTTCTGTTGGAAGGGCCGTTTTGATGTCAGGTGGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01199 CACTCATAGTTTTGAGCTGATTGTGGGGCCAAACCACTGGCCTGAGTCCTTTTCACCCCA Gene BVV0102_020003 + 0 NULL GK000007.2:59525877-59633828 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213766 1 XLOC_130529 Coding TCONS_00213766 XLOC_130529 Coding Coding POU4F3 7:59524415-59527586 = TSS160058 2856 1 TCONS_00213766_4 338 0.0497198879551821 2 0.0996845425867507 0.000763091115903327 0.000211096810360409 0.000635078309554947 0.000162825372776593 0.000542782392819215 0.000410810398099667 0.000220651451154292 0.000282688927799827 0.000411635453109839 0.000201733206985923 8.76475689856762e-05 3.12997789512261e-07 5.59267730910133e-05 0.000912469924355912 0.000133993023383564 0 0.000110449353147204 0 0.000361560087257899 0.00189480021181323 0.000438990390864718 0 1.12359859433144e-11 0 0.000593998546236506 0.00041937251667724 0.00122885458107117 1.52935330446165e-05 7.79004111229339e-06 9.11809345875417e-12 NM_001192035.1 POU4F3 Bos taurus POU class 4 homeobox 3 (POU4F3), mRNA. 0.0 1835 100.00 0.355742296918768 NM_002700.2 POU4F3 Homo sapiens POU class 4 homeobox 3 (POU4F3), mRNA. 0.0 1651 91.03 0.413165266106443 TCONS_00213766_4 sp|Q15319|PO4F3_HUMAN PO4F3_HUMAN POU domain, class 4, transcription factor 3; 0.0 693 99.41 0.997041420118343 2 coding 0 0 0 0 -0.322526683421836 0.356124756050745 -0.0272640983797631 0.633039863161208 GAGAGGGGAGGCAGCGAGCGAGAGGGCGAGGGGAGCGCGGGCGCTGAGCGGCGCTCACTTGGAGCGCGGCGAGCCAGCGAGAAGAGCCTGATCCATGTCCCTCGCTGCCTCCCTGCCCGGCGCGCGAAGATGATGGCCATGAACGCCAAGCAGCCTTTCGGCATGCACCCGGTGCTTCAAGAACCCAAATTCTCCAGCCTGCACTCCGGCTCCGAGGCCATGCGCCGAGTCTGTCTCCCAGCCCCGCAGCTGCAGGGTAATATATTTGGAAGCTTTGATGAGAGCCTGCTGGCACGCGCCGAAGCTCTGGCGGCGGTGGATATCGTCTCCCACGGCAAGAACCATCCGTTCAAGCCCGACGCCACCTACCATACCATGAGCAGCGTGCCCTGCACGTCCACTTCGTCCACCGTGCCCATCTCCCACCCGGCCGCGCTCACCTCGCACCCGCATCACGCCGTGCACCAGGGCCTCGAGGGCGACTTACTAGAGCACATCTCGCCCACGCTGAGCGTGAGCGGCTTGGGCGCCCCCGAGCACTCGGTGATGCCGGCCCAGATCCACCCGCACCACCTGGGCGCCATGGGCCACCTGCATCAGGCCATGGGCATGAGCCACCCACATGCCGTGGCGCCTCACAGCGCTATGCCTGCCTGCCTCAGCGACGTGGAGTCGGACCCACGAGAGCTCGAGGCCTTCGCTGAGCGCTTCAAGCAGCGGCGCATCAAGCTAGGGGTGACCCAGGCGGACGTGGGTGCGGCCCTGGCCAACCTCAAGATCCCCGGCGTCGGCTCGCTCAGCCAGAGCACCATCTGCAGGTTCGAGTCTCTCACTCTCTCGCACAACAACATGATTGCGCTCAAGCCGGTACTCCAGGCCTGGCTGGAGGAAGCCGAGGCCGCCTATCGAGAGAAAAATAGCAAGCCGGAGCTCTTCAATGGCAGTGAGCGGAAGCGCAAACGCACGTCCATCGCGGCGCCGGAGAAGCGCTCGCTGGAGGCCTACTTTGCGATCCAGCCGCGGCCCTCATCCGAAAAGATCGCGGCCATCGCCGAGAAACTGGACCTTAAAAAGAACGTGGTGAGGGTCTGGTTCTGCAACCAGAGACAGAAACAGAAACGAATGAAGTACTCGGCTGTCCACTGACTGCGACGGGGCACGGCGTCCGGGGCCGGGAGAGCTGAGTGTATGTCCCCCTGGAGTTGGGGGGAACGGTATGGGGGCTCCAAGACGTTTCCTGGCAGGTCAGGCTCTCACCCCCGAAGTCACAGACTTTCCCCTTTATCCTAATTAATTGCCTCACGGCCTTCCCTTTCCCTTCTTTCCTTTCTGTTCCCACCAGAAAAGTTTGGGCGCTAAGAAAAAAATTCAGGAAAGGCAGGCCTGGAGGGACTTGTGCTCTCCGTGGTGCTGAAAATCTCCTTCGCGCCCAGGACTGCGCGACCTCAGGGCAGGAGCCCAAAAGTAAGGGATAGTCAATTAGCCCGACTGCAAGACTCTGGCTTGAAGGCATCAGTTTGCTTAGCGTGATTAGACAAGGGGTGAAGGGATGGGAAGGAAGTGATAAGTAATAATACAAAGTCTAAGTGGGGTACAAACGTACTGGAGATTTATTTAGAGTATATAAAATACACGTATGTTTCCAAAGGATAGCCTTATATTCCCTTCTCCACCTAAATTCTATCCATCTCATCCTTTGGTTTGCTGTACGTTCTCTAAGGTAGCATGAATTAGGTTCAGGGAAAATGTGCAGAGAGTTGCCGGCTCCAAGCTGTTCTCCGCCATAGGGTGGGCTCCGGAAAAAGTGGGCCCTTTTCAGCGACTGAAAATGCTGGAATCCTGTAACTGGGTTGCAAGCAGCAGCCAGCCCCTGCTGTGGCCCATCCTCCACGATCTGCTGGCCGTTCGAGGGGTAAAGACTGCCTGAAGGAAGGCGGGGGATTGGTAGCTTTCCGGTCGGACTGAGGACTCTCTGACCCTTGCTCACTGTTCCAGCCAGACTCTCAGAGCAGCGTAGAGGCGGCTGCCCGAACGAAAGTAACTGTAACTCTCCGGAGCATATGCAAGTCCTTCTAACAAGGCTCACCTCGTTACGCTTTTATTACTGTTCGCATCATTGTTTACTATTATTTATTTACCGCCACTTTTTTCCCATCCCCCAACCTCTTGGTGGAGGTTCACTCATAGTTTTGAGCTGATTGTGGGGCCAAACCACTGGCCTGAGTCCTTTTCACCCCAGTGCCTCTGGCCCCGTCACATTTTATCTTTCGTTGCTTCATGTAATTTGTGTGTTGCCGTGTGACCTTTGGTTTTGTTGTCCGAATAGATGCAAATAAAATATTGTTTCCTTCTCTCTTTACCCCTTGAATTAACTTCTAAAATAAATGCTTTATTTTTCAACCCGAATCGCGGTGCTTTACTTTCTCGGAGGTTAAGGAGTACTAGTCTCGGAAAGCATTTAGAAGTGAGAACCCAGAAGGGCTGAACTATCGTTTCTAGCAGGTCAATCTCCTGCAATTATTTCTCCTTGCTCCTTTTCCCTGGGTGCCTTATCTTCTCACCCAGACCCTCCCTAGACCTCAGAGTTTCCAGATCCTTCCTCTACACTTCTCCAAGTGCAAATCTGTCAGCTTCTATTTGTTCAACTTGACTCAGACCGAAAACTTTTAGGCCTGACTAATGATGGGCTGTCGTCTCTGGGTCCCACAGAGTCGGACACAACTGAAGCGACTTAGCAGCAGCAGCAGCAATGGGAGTAGGAGCCCCCAGTACCTCCACTCATTGGCTGAATGATCCTGAATCCAGTTTCTTAAACTTCTCTGAGTCTCCGTTGATTGTCTGCAGCATGAAGATGCT EMBV3_20693 GGTCCAAGTTCTCAGTTATCCCTCAAGATCCAGTCCTGCTGTCGGGGACCATCAGATTCA Gene GeneID:100299784|LOC100299784:XM_002694876:874_cdna Constitutive 0 NULL GeneID:100299784 18 GENE LOC100299784 NULL similar to ATP-binding cassette, sub-family C, member 11 EMBV3_04661 CGTGCCGGTGTCACGAGTCATGTGCTCCATCTAACATGATGATTTTCCAGGGTGTGACTC Gene GeneID:514610|MESDC2:NM_001034469:36_cdna UTR3_Alt 1 NULL GeneID:514610 21 GENE MESDC2 MGC127121 mesoderm development candidate 2 EMBV3_16396 ATGGATTCCTGGTGGGATTCATACAAGCAGTGGCTACATTCCACATGGCTTTCTGTGGCC Gene GeneID:100300575|LOC100300575:XM_002693687:340_cdna Constitutive 0 NULL GeneID:100300575 15 GENE LOC100300575 NULL similar to olfactory receptor 154 EMBV3_41804 ATCAACTCTCCCTCCAGTGAATTTTTCAATACTTGCCTTTCTGGGTGAAGGAAAAGGCCA Variant GeneID:511533|SPATS1:XM_002697259:478_cdna 752^813 2 EMBV3_37666 GeneID:511533 23 GENE SPATS1 NULL spermatogenesis associated, serine-rich 1 EMBV3_03884 CTGCCTCCCAGCCTCAACTGCTAATGTGTTATTGGAGACAAGATTTTGTAACAGTGCTCC Gene BVV0102_122441 + 0 NULL GK000003.2:19048708-19054164 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05784 GCCAGCGTCCAGGAAAAGAGAAACTTGCCAGAGAGAGAAACATGCTGAAGGAAGGGAAAC Gene BVV0102_202214 + 0 NULL GK000005.2:106250352-106253890 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41763 TGAACTACTATGCTGGGGTGAGCGCGTCCATTGACACTGATGTGTATTTCATCGTCATGA Gene GeneID:507306|CAPSL:NM_001098899:15_cdna Constitutive 0 NULL GeneID:507306 20 GENE CAPSL MGC165794 calcyphosine-like EMBV3_13603 TGTTCCAGAGGAAACTTGATGAGACCACCAAACTGCTCAGAGAGCTCCAGGAAGCCCAGA Gene GeneID:526153|BRD7:NM_001103260:309_cdna Constitutive 1 NULL GeneID:526153 18 GENE BRD7 MGC165911 bromodomain containing 7 EMBV3_24383 GGCACAAGGGAGAAGCCACAAGGAAAGTATAGCCAAACTGAAAGAGAAGTTCATGTTGGA Gene GeneID:510382|LOC510382:XR_083633:89_cdna Constitutive 0 NULL GeneID:510382 3 PSEUDO LOC510382 NULL similar to guanylate binding protein 4 EMBV3_01565 TGCCTGGTCATACTGCAGGTGGTCACTAGGGTACAGACACTGAGACAGAACTGGGACCTA Gene BVT0102_218773 + 1 EMBV3_03322 GK000005.2:104236942-104237712 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24553 GGCTCAGCCAGTGAGGCTCAGAAGGGCACAAAAGGGATGGAAGAAAAAGAACAAAGAGAA Gene BVT0102_114251 + 0 NULL GK000019.2:21425399-21426527 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25819 TTGTGGCATAGCATGTGGTCAACGCACTAGTTGATGTCAGGGGCTCTCTCTAGTTGCCCT Gene BVV0102_202744 + 0 NULL GK000019.2:248590-626244 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20189 GCCTGCCAACCAAGGACAGGAACTGGCAGAATGGGAACAGTCGTACCATTATTCAAACAC Gene GeneID:785150|LOC785150:XM_002691582:112_cdna Constitutive 0 NULL GeneID:785150 11 GENE LOC785150 NULL similar to aquarius EMBV3_11375 GTGAATCAGAAGGACAATGAGATAGTTGCCTCTCACAACCTTGGGAATGGCCATCCTCCC Gene GeneID:615239|GPC3:NM_001035463:20_cdna Constitutive 0 NULL GeneID:615239 X GENE GPC3 MGC128119 glypican 3 EMBV3_36985 TGCTGCAGTATGTCCGGATGCCCCTGCTGACCCCCCGCTACATCACAGACGTCATAGACA Gene GeneID:768068|KLHL12:NM_001077125:237_cdna Constitutive 0 NULL GeneID:768068 16 GENE KLHL12 MGC134560 kelch-like 12 (Drosophila) EMBV3_12771 ATCTTTCCAGTGTGGCTGAATCATGGAATGGGTCCTATGGATCTACTCTGAGACAGGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20241 ACAGCTCGTTGTTGAGGCCAGTTGCTGCTTGGTGGAATGAGAGTCTTCAGTGGCAATAAT Gene BVT0102_113139 + 0 NULL GK000012.2:56444763-56692810 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035446 TCONS_00037096 TCONS_00035443 TCONS_00035444 TCONS_00037099 TCONS_00035445 2 XLOC_020906 XLOC_021294 NonCoding TCONS_00035443 XLOC_020906 NonCoding NonCoding - 12:56621833-56623634 - TSS25981 566 2 TCONS_00035443_2 45 0.814487632508834 2 0.686666666666667 0.00058605800421186 0.00285654372874006 0.000459034378986968 0.000656002719432686 0.00107407965501011 0.000538992038027126 0.000189396687194915 0.000668075953227838 0.000753049924618057 0 0 1.19056880232548e-68 2.35930302828187e-32 8.64974342603811e-06 1.61287018827914e-05 0 0 0 0.00222240913514802 0.00114350540903148 4.18737500549877e-69 0 0 0 4.48239282590226e-18 2.68493955908828e-70 1.37475703779553e-13 0 5.25519083340657e-47 0 XM_005217757.1 FICD PREDICTED: Bos taurus FIC domain containing (FICD), transcript 5e-08 62.6 74.49 0.171378091872792 0 noncoding 0 0 0 0 -0.722104317710888 0.177268627222011 -0.0113141780963684 0.83359430549788 CTACCTGATGCGTAGCAAGTCAAAATGAGGCTATGTCCAGGTTTGCAGCCAAGAGGTGGTTTATTTTCAAGGCAGCCAAGCCATGAGACAGGAGAACAAATCTCAATTATTCCTCGCCACAGAAGGCAAGGCATTCAGGGTATCACAGAGAAAGAATAAAGAAGCAGGGCTCTGCAAGGAGGCCTGGGGAACATGGAGAAAAGTGGAAAAACGTGGGTAATCACTGTTCTGCGCAGGCGCAGGCCCGATAATTGAGCTACAGGACTCTGCTGGTTCAAAAGGTCAAAGCGAGCAGATGTCAGCATGTGTGCTGTTGAAGGGTTAGTGGTCGCATTCTAGGTACCTGCTTAGCTGCAACCAGGCACAGCCTGACTCCCAGTCCTGGGGAAACAGCTCGTTGTTGAGGCCAGTTGCTGCTTGGTGGAATGAGAGTCTTCAGTGGCAATAATTAAAACAACCTTGACAGGGAATGATGATGGTGTTTTCTGCAGAAGAGTTATACAACCTGCCTTCTTTTCAAAAGATCTTTCAGAATGTGAAGATGACTGGGGATGCTTATTAAGGGA TCONS_00037101 r 3' 910899 TCONS_00037101 r 3' 912699 EMBV3_07410 ACACAGACAGGTTCCTGCAAGCAGACAGTGCTGATACCTGTTCAGTTGCATGTCCCCGAA Gene BVT0101_001444 + 0 NULL GK000003.2:102444535-102474612 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171041 1 XLOC_103710 Coding TCONS_00171041 XLOC_103710 NonCoding Coding - 3:102470038-102470427 - TSS127653 389 1 TCONS_00171041_1 83 1 0 0 0 0 0.000234821981997136 0.000228456019690043 0 1.49915017734324e-05 1.5204874934449e-05 0.00225143106718613 1.07482731655765e-05 0 0 0.000302418110323411 0.00102856302418395 0.000643230672440155 0 0 0 0 0 0 0 0 0 0 0 0 4.93839942412662e-05 0 0 0 noncoding 0 0 0 0 TGGAAACTCTTGGCCCACGACGCTGAGGTCCCTGAGCACATGCTGGATGCACCGATGGTGAGTCTGCACCGTTTAAACCAGACACCAAAGTCTGTGCGCTGGGGTGGAAGGTCAGCAGCTTCCAGGTGGACAGTCATGAGGCCTAGCAGGAGTACACTCTTGAGGAAGAGGAACCCAAACATTCGAAATGGTTCATTTCTTCAAGGTGTTGTTGACTGGGCACTCCTGTGTGCATGCACTGTCCAGGGGATGCCCTCACACAGACAGGTTCCTGCAAGCAGACAGTGCTGATACCTGTTCAGTTGCATGTCCCCGAAGGTCCCTTGAGGGCAAGGATGCTGCCTGGATGGCCCCCTGAGTCCCCAGATCACTGTGTGGAATAGGGTGGC TCONS_00174330 r 5' 39002 TCONS_00174330 r 5' 39002 EMBV3_36340 ATAGCTGCGATGTGCTCAATGGCATCCCCTTCACCTGGAGCCTCACATTATCAAACGCTT Gene BVT0102_064325 + 0 NULL GK000019.2:55976415-55978696 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097901 TCONS_00094642 TCONS_00094639 TCONS_00094643 2 XLOC_058368 XLOC_057505 Coding TCONS_00094643 XLOC_057505 Coding Coding UBE2O 19:55928560-55978203 = TSS70740 5732 1 TCONS_00094643_7 1287 18 0.884895854316909 1.33133380249875e-07 0.000226714782951125 0.0015210749100244 0.000497670682909422 0.00101338674722229 0.000144330887800989 0.000494859354741784 0.000347392236222989 0.00113719734820755 0.0005884167842917 0.000689199322810248 1.01414875569497e-07 5.85001812279758e-05 0.000225387679676192 7.40643128492388e-05 0.00245487157443502 0.000171178573709044 1.97816610347481e-06 0.000141652853963984 0.000663089696841776 0.000108509446439938 0.000734544768587384 5.75584292756219e-06 0.000365653853013486 0.000427278715968423 0.000159677013540162 0.00076316761441511 0.000752460952650651 0.000572164455875009 0.000245391364325361 XM_002696167.2 UBE2O PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2O (UBE2O), 0.0 9633 100.00 0.931612002791347 NM_022066.3 UBE2O Homo sapiens ubiquitin-conjugating enzyme E2O (UBE2O), mRNA. 0.0 5782 84.28 0.916782972784368 TCONS_00094643_7 sp|Q9C0C9|UBE2O_HUMAN UBE2O_HUMAN Ubiquitin-conjugating enzyme E2 O; 0.0 2274 95.37 0.97047397047397 1 coding 0 0 0 0 -0.0255209632845826 0.829817017288877 -0.0751267155742766 0.160445593994983 ATGGCGGATCCCGCAGCGTCAGCGCCCGCAGCCCCGGCTCCCGCCCAGATCCCGGACGTGCCCCCGAGCCCGGACGCAGCCCCCGCCTCGGCCCCGGCGCCGGCGTCCGCGGCGGACTCGGGCTCCGGGCCATCCTCGGACTCTGGCCCCGAAGCCGGCTCGCAGCGGTTGCTCTTCTCCCACGACCTGGTGTCGGGCCGTTACCGCGGCTCGGTGCACTTCGGGCTGGTGCGCCTCATCCACGGCGAGGACTCGGACTCGGAGGGCGAAGAGGAGGGCCGTGGGAGCTCGGGCTGCTCGGAGGCTGGGGGCGCGGGCCACGAGGAGGGCCGGGCCAGCCCGCTGCGCCGCGGCTACGTGCGCGTCCAGTGGTACCCGGAGGGCGTCAAGCAGCACGTGAAGGAGACCAAGCTGAAGCTCGAGGACCGCTCCGTGGTGCCCCGCGATGTGGTCCGGCACATGCGCTCCACTGACAGCCAGTGCGGCACCGTGATCGACGTGAACATTGACTGCGCCGTCAAGCTCATCGGCACCAACTGCATCGTCTACCCCGTCAACAGCAAGGACCTGCAGCACATCTGGCCCTTCATGTACGGGGACTACATCGCCTACGACTGCTGGCTGGGCAAGGTCTACGACCTGAAGAACCAGATCATCCTGAAACTGTCCAACGGCGCCAGGTGCTCCATGAACACGGAGGATGGCGCCAAGCTCTACGACGTCTGCCCGCACGTCAGCGACTCTGGTCTCTTCTTCGATGATTCCTATGGCTTCTACCCGGGCCAGGTGCTCATTGGCCCTGCCAAGATCTTCTCCAGCGTCCAGTGGCTGTCGGGCGTCAAGCCGGTGCTCAGCACCAAGAGCAAGTTCCGCGTGGTGGTCGAAGAGGTGCAGGTTGTAGAGCTGAAGGTCACCTGGATCACCAAGAGCTTCTGTCCAGGGGGCACGGACAGCGTCAGCCCCCCACCCTCTGTCATCACCCAGGAAAACCTAGGCAGGGTGAAGCGTCTCGGATGCTTTGACCATGCTCAGCGGCAGCTTGGGGAGCGCTGTCTGTATGTCTTCCCAGCCAAGGTAGAGCCGGCCAAGATTGCCTGTGAATGTCCAGAAAAACACTGCGCCCAGGGGGAGGGCTCTGTGGCCAAGAAGGTGAAGCGCCTCCTGAAGAAACAGCTTGTGAGGATCACATCTTGCTCCCCGGACGTCCAGTGCTCCAGGGACCATTCCATGGAGGACGCAGGCAAGAAGGGGGCGGCCAAAGCCAAGAGCGAAACGGGCTCCGCCAGCCCCGAGGAGACGCCCGATGGGTCCTCCAGCCCAGTGGAGATGCAGGACGAGGGCCCAGAGGAGGCCCACGAGGCGGGTGAGCAGCTGCCCCCCTTCCTGCTGAAGGAGGGTGGGGACGACAGGCTGCACTCGGCCGAGCAGGACGCGGACGATGAGGCCGCCGACGACACAGACGACACCAGCTCGGTGACCTCCTCCGCCAGCTCCACCACCTCCTCCCAGAGCGGCAGCGGCACGAGTCGCAAGAAGAGCATCCCCTTGTCAATAAAGAATTTAAAGAGGAAACACAAGAGGAAGAAGAATAAAATCACACGCGACTTCAAGCCGGGGGACAGGGTGGCTGTGGAGGTGGTGACCACGATGACCTCGGCGGACGTGATGTGGCAGGACGGCTCCGTGGAGTGCAACATCCGCTCCAATGACCTCTTCCCTGTGCACCACCTGGACAACAACGAGTTCTGCCCCGGAGACTTCGTGGTGGACAAGCGAGTCCAGAGCTGTCCGGACCCCGCTGTCTATGGCGTGGTGCAGTCTGGGGACCACGTGGGCCGCACGTGCATGGTGAAGTGGTTCAAGCTGCGGCCGAGCGGTGACGACGTGGAGCTGATCGGAGAGGAGGAAGACGTGAGCGTCTACGACATCGCCGATCACCCTGATTTCCGGTTCCGCACAACTGACATCGTCATCCGAATCGGTAACGCTGAGGACGGAGCCCCGCACAAGGAGGACGAGCCATCGGTAGGCCAGGTAGCCCGCGTGGATGTCAGCAGCAAAGTGGAGGTGGTGTGGGCTGACAACTCAAAGACCATCATCCTGCCCCAGCACCTGTACAACATCGAGTCTGAGATCGAGGAGTCGGACTACGACTCAGTGGAAGGCAGCACCAGTGGAGCGTCCTCAGACGAGTGGGAAGACGACAGTGACAGCTGGGAGACAGACAATGGGCTGGTGGAGGATGAGCACCCCAAGATAGAGGAGCCCCCCATCCCCACCGCCGAGCAGCCAGCAGCCCCAGAGGAGGACAAGGGTGTGGTGATCAGCGAGGAGGCTGCCACGGCCGCCATCCAGGGGGCCGTGGCCATGGCCGCCCCCGTGGCCGGGCTGATGGAGAAGGCGGGCAAGGACGGGCCCCCGAAGAGCTTCCGGGAGCTGAAGGAAGCCATCAAGATCCTGGAGAGCCTCAAGAACATGACGGTGGAGCAGCTGCTGACAGGCTCGCCCACCTCCCCCACGGCAGAGCCTGAGAAACCCACGCGGGAGAAGAAGTTCTTAGATGACATCAAGAAGCTGCAGGAGAACCTCAAGAAGACCCTGGACAATGTGGCCATCGCCGAGGAAGAGAAGATGGAGGCGGTGCCGGAGACGGAGCGCAAGGAGGACAAGCCCGAGGGGCAGTCGCCAGTGAAGGCCGAGTGGCCCAGTGAGACCCCGGTGCTCTGCCAGCAGTGCGGTGGCAAGCCTGGAGTCACATTCACCAGCGCCAAGGGCGAGGTCTTCTCGGTGCTGGAGTTCGCACCCTCGAATCACTCTTTTAAGAAAATTGAGTTCCAGCCTCCAGAAGCCAAGAAGTTCTTCAGCACAGTGCGGAAGGAGATGGCACTGCTGGCCACCTCACTGCCTGATGGCATCATGGTCAAGACATTCGAGGACAGAATGGACCTCTTCTCGGCCCTGATCAAGGGCCCCACTCGCACCCCCTACGAGGACGGCCTCTACTTGTTCGACATCCAGCTCCCCAACATCTACCCGGCCGTGCCCCCCCACTTCTGCTACCTCTCCCAGTGCAGTGGCCGCCTGAACCCCAACCTGTATGACAACGGGAAGGTGTGCGTCAGCCTCCTGGGCACCTGGATTGGAAAGGGGACAGAGAGGTGGACGAGCAAATCCAGCCTTCTCCAGGTGCTTATCTCCATCCAAGGTCTAATCCTGGTGAACGAACCGTACTACAACGAGGCAGGCTTTGACAGCGACCGAGGCCTGCAAGAGGGCTACGAGAACAGCCGCTGCTACAACGAGATGGCCCTCATCCGCGTGGTACAGTCCATGACCCAGCTGGTCCGGCGGCCACCCGAGGTCTTTGAGCAGGAGATCCGGCAGCACTTTAGCACCGGTGGCTGGCGGCTGGTGAACCGCATTGAGTCCTGGCTGGAAACCCACGCCCTGCTGGAGAGGGCCCAGGCGCTGCCCAACGGGCTCCCCAAGGACAGCAGCTCGCCGGAGCCGCCGGCTGTGGCCGAGCTCTCAGACTTCGGCCGAGAGGAACCTGAGGACGGGGGGCTGGCCCCCGGGGAGGCCTCCCAGGGCTCAGACTCGGAGGGCCCGGCCTCAGCCCCCAGGGACCGCACGGAGCAGGCCTCGGAGGCCCCGCCCGACGCCTCGGTGCCGCCCAGCGTCAAGCCAAAGAAGAGGAGAAAGAGCTACCGGAGCTTCCTGCCCGAGAAGAGCGGCTACCCTGACCTCGGCTTCCCCCTCTTCCCGCTCTCCAAGGGCTTCGTCAAGAGCATCCGGGGAGTCCTGATGCAGTTCCGGGCTGCCCTGACGGAGGCGGGCATGCCCGAGAGCGCGGGGGACAAGTAGCCAGCAGCCCCGGAGGAAGGCACATAGGTGGCCACAGGGAGAGGCCTCCCCCCTTCCCTCTCCTCCCCTGTCCCAGTGCAGGCCCCGCCCCCTGCCCTTTGCCCCCTCCTCCCAAGGTGAGTTTGCTGCTGACGTGCAGGAAGTTTCTTGAGATGCTGCCATTTGTATTCCGAAGCAATCTTCCAACAGGCAGGTGCCCTGTGGCAAAGGAAATCAGAACCGCGCAGCTGATTTTCCCCTTGTAGTCCCAGGCAGAGTGCCCCTGCGCTTCCTCCCGCGCCGTCTCACCCTCAGGGCAGGGGTGGGCTCTCCCTGGGGTCTGACACAGGAGAACACAGGCCACGTGGACGTGCCTTGCATGAAATGTGGGTTGCCGCGGCGGTTGCCCCGTCCCGCCTGCCCTCTCGAGTCCCGCTGACGCTTCCTGGTGTCCCGGGCCCGCCCGTCGCCACCACCTGCCAGGTCTTCCCTCGCCCCCAGCTCGGCCACCCTCCCCAGAGCGGTGCCGCCGCCACTGACTCCCGGCTGGGCCCTGGCCTGTTGAACTTGCTCTCTGCGAGAGGTGGGCACCAGGCCGGGTGCATGGCGACGCCCGGGAGATGGTGGCCCTCGCACGCTGCCACGGGGTAAGGACAGGGAGCTGCTACTGGGAAGACACGGCTATAGGTGCCTTGCCCTTCCTGCCCCTCGGGGTGAGGGGGATCGCAGCTCTGGCTTTGAGGTCCCCGGAGGCGGGAGCAGCAGCACAGACGAGGGCCTCTCCCGTGGACTCGGGCCCTCTCCCCTCCTGTGTCCAGTGCTCACGCCGGCAGGGGTGGCACGCAGCTCATGGAACTCAGAGTGGGCCAGCCCTCTCCCCGCCCCAGACAAGAACACAGCCTGTCAGCCCTGCGCTTAAAACCGCAGGCTCGATGTGGCAGAGTGGCGGCCAGCAGGGTTTTCCCTCGCAGAGCTGGGCCCAGAGGTTTACAAGTTTTCTAAGCGTTTGATAATGTGAAGCTCCAGGTGAAGGGGATGCCATTGAGCACATCGCAGCTATGTAATTTTTGGTGTATGTAATGTAATATTTAAGATTGAAAGAATAAATCAAAAAATATTAACTCTTACTAGGAAAAAAAAAGACAAAATAAGAAGCCAAAGCATGATGTGTCTTGTCCGCCTTACGCTGGCTCCACACCTGGGCCGCCGTGAGCACGCGGCCGGCGGCAGCGCGGGGGAGGACGGGGGCCAGACCAGGGCTGCGGCGATTGGAGGCCGGAGTCGGGGTCTTGTTTGAGGATCACCCAGAGTGACTGGCGGGGCTGTGCTTCCCGGTGCGTTGTTCACGTGGAGATGTGAATGCCTATTGCTTAAGATATCTGTATAAAGTGCTGTGTGATTAAACTTTTTTTTTTTTTACTTGCATTTTTTTTGGTTTGGCTCATTACAGTGTACAAAACAGACAAGGTGGCACCATTAAACCTGCCTCTGCCATTCATCTGGCTCTGTCGCCTTTCTTTCCCTCGGGGGCACCTCACACACCCTCCCCAGGGGAAGGAAAGATCCCTGTGGCTGGGGCGGGGTGGGGGGCGTCTCAAGGCAGCAGCCCCTTCCCCACCCAGCCCGCTCCCAAGCCTCTTCATCTCCTGTCAAGGACTTGGCGGGGCCGGGAGGTGAGGGTCTAGAAGCTCAGTGGGTGGGTGCTCTTGCCTCTGAGCAGGGCCTGGGTCCTGGAGCCCCCTTTCAGCAGGGCAGCAGCAGCAGCTCTGTTCCCCGGGGGCCTCTGACCAGGTCCACCCGTTCAGCTCCTTCCAGATGCTGGGGGGGGCTGGCCTGGGCTCGAAGCCACTCTGGATGGCTGGAATCTGCCTCTCCTCACCACTGCTTCC EMBV3_28841 AGTTCTCCGGTCATCTTTGCAGGTGGTCAGTTGACCAAGCTGCACCAGTTGGCAATGCAA Variant GeneID:540653|PCBP2:NM_001034711:54_cdna 614^748 2 EMBV3_35322 GeneID:540653 5 GENE PCBP2 MGC127996 poly(rC) binding protein 2 EMBV3_27711 CACACTGGGGAGAAACCCTACAAATGCAATGAGTGTGGGAGGGCCTTCAGTCAAAAGTCA Gene GeneID:511794|ZNF192:NM_001100344:7_cdna Constitutive 0 NULL GeneID:511794 23 GENE ZNF192 NULL zinc finger protein 192 EMBV3_23444 TTTTCCGGCCAACCCGCCCCTAGTCACGTCTTCCCTCCCGAGACCCCGTTTCCAATCACT Gene BVV0101_086548 + 0 NULL GK000026.2:47651857-47801388 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152563 TCONS_00152562 1 XLOC_092367 NonCoding TCONS_00152562 XLOC_092367 NonCoding NonCoding - 26:47762745-47764128 - TSS113764 690 1 TCONS_00152562_2 172 0.504347826086956 2 0.502170767004342 0.000400363899596097 0.00135027681473494 8.80093675788783e-17 2.35130235760526e-05 0.000808218077251232 1.83008008850629e-05 5.00024111307473e-05 0 0 0 0 0 0 0 1.38066579098022e-83 0 0 0 8.51479389263662e-05 0.000781676337788241 0.00339457147721069 0 0 0 0.00393841022874618 8.60635552265392e-05 0.00053996691622397 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 1e-22 111 71.54 0.359420289855072 0 noncoding 0 0 0 0 0.0676446330751249 0.764243028766249 0.00170050305467126 0.988912750536706 GCATGCGTGTTTGAAGCAAGACAAAACACATCACACGTGAGACGTGATCGCCCCCAAACATCGCAGAGCCAACAGAGGTTGCTTCGTTAGCCAGCTCGTGTTCGTTTATGTGGAGACGGCTGCGTGAACACCTGCTGTGTGCCGGGCAGGGTGTCGGGAGCAGGGAAGACAGGGATGACCGAGGGCAGCCTCATCGCCGCCTTCCCAGGCTCTGAGACCGCAGGCTTTTCCGGCCAACCCGCCCCTAGTCACGTCTTCCCTCCCGAGACCCCGTTTCCAATCACTGGGACCCGGAGGCAGAGTAGCCACTGCCACGTGCCCCTGGAGAGCACCGTCTCCCTGACCTGGTCCCCTCCGGAGCCCTCCTGCACCGCCACCTTTCCACACACTTCCAGCGACACCCTCCTCACCTGTCCGCGGCGTGGGCTCCAGCATAGGGACACAGGTTCAATCCCTGGGCCAGGAAAGACCCCACGTGCTGCAGGGCAACTAACCCACCAGCCGCAGCTACTGAGCCTGGGCTGTGGAGCCTGGGAGCCGCGACGACGGAGCCCTCGCACCCGAGAACCCGCGTGCCCAAGGAGCGGAGCCTCTGCAGAGAGAAGCCCACGCGCCGAAACTAGAGAGCGGCCCCCCTCGCCGCAACCGGAGAAGAAACCCGCGCAGCAAGGAAGACCCAACACAGCCCAA TCONS_00151229 r 5' 608 TCONS_00151229 r 5' 0 EMBV3_20229 AGACAGCCACAGGCAATACTTACACGATGGGCACAGATGGGTTGGCCCCTGTATTAGACA Gene BVT0102_303719 - 1 EMBV3_29011 GK000020.2:9919738-9930158 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114434 TCONS_00114429 TCONS_00114427 TCONS_00114428 TCONS_00114435 TCONS_00114431 TCONS_00114432 TCONS_00114433 TCONS_00114425 TCONS_00114430 TCONS_00114426 1 XLOC_069292 Coding TCONS_00114425 XLOC_069292 Coding Coding BDP1 20:9927543-9976686 j TSS85362 7048 1 TCONS_00114425_5 1470 24 0.857067274429205 3.92760046174331e-16 7.46414823869857e-05 4.53409403673038e-16 9.33290600117555e-05 4.61369930115237e-05 3.54117026646912e-22 3.0201194403314e-05 3.63444911851774e-11 0.000195724966993478 0.000841252732770994 1.20572664407722e-08 0.000346682351510894 0.000258883251872004 0.000491474302286744 4.97513606530836e-44 0.00137561877958119 1.13388081524136e-38 0.0030529571712257 4.72215051874963e-05 6.16995040424083e-05 1.47327186433698e-06 0.00128071086568698 3.81872138703869e-06 5.83055680069542e-06 9.01297506661394e-05 7.59268769367352e-05 6.99687156074002e-05 0.000362047629759702 0.00038226075184567 0.000343293752241368 XM_005221444.1 BDP1 PREDICTED: Bos taurus B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB (BDP1), transcript variant 0.0 6536 99.73 0.517593643586833 XR_241785.1 BDP1 PREDICTED: Homo sapiens B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB (BDP1), transcript variant 0.0 2524 79.87 0.399545970488082 TCONS_00114425_5 sp|A6H8Y1|BDP1_HUMAN BDP1_HUMAN Transcription factor TFIIIB component B'' homolog; 0.0 1539 59.14 0.999319727891156 0 coding 0 0 0 0 0.047702353196713 0.699904892852446 0.0383494390250654 0.415537762558189 CGAGTGATGTCACTGTGGAAATGGAGACTGATTTGAAAGAAACTGAAGAAAATGACATCTCTCCCAGGGAGAAAATGCCAGAAATGAGTGATGTCACTGCAGAAATGGAGACAGATTTGAAAGAAACCAGAAGAGAGATTTTCCCAAGGGAGGAGATAACAGTGGTGACTGATGCCACTGAGGAAAGAAAGACAGATTTGGAAGAAACTGAAAGAAGAGAAATGTCCCTACAGGAAAATGCCCCAGAGGAAGTTGATACTATCGGGGAAGTAGAAACAGATTTGAAAAAAACTGAAAGAGAAATTTCCCCAAATGAGGAGATAACAGAGATGCCTGATGCTGCTGAGGAAGTAGAGACAGATCTAGAAGAAACTGATAGAAGAGAAATATCTACACAAGAAAATGCCTCAGAGGTCAAAACTGTAGGTGACGAAATGGAGATAGATTTGAAAGAAATTGGAATAGAAACTTCCCCAAGGGAAAAGGTATTAGTGGGGATCAGTGCCACAGGGGAAAGAGAGACTGATTTGGAAGAAACTGGGCAGAGAGACATTTTCCTGATGCGGAAAGCATCAGCAAAGGTGGCTGCCGTTGAGGAAATAGAGGCAGATTTGAAAGACACTGGAAAAGAAATTTCCTTGACGAAAAGCAGATCAGAAGAGATTGAGAAAAGCATGGCAGATTTGGAAAACATAGAAGAAATAGACATTTCTCTAAGGGAAAAAGATCCAGAGGACACTGGGACCTCAAGTCGAGCTGAGGCAGATCCCTTGCAGACCAGTAGTGATGACTCCAGCACTGTGTCTTCACTGACTAATAGATCTTCGGAACTTGATAAAGTAGAAGACCAGAGGATGCGACCTCCAAGTGTTCCAGAGCAGTTTTCAGATATTAATTTAAGCAAATCTCTTCCTCAAGAACAGACGCCATGTGAAATTAAGCTGACACCTTTTGTGAGAAGTAGATTCAAAAGACCTAAACCAAACTTAGCAAGAGCAGCTTCAAAAAGAGAGACTACGAAAGCAGAAAAGCATGCACCTGGGAAGGAGGCGGAAGCTGGTAAAACAGAGACGGTTGTGATACAGCAGAACTGTGAACAAATGAGTACTTTCCCTTCTCAACATGATGTGGCTTCTCTAATGACATCAAGAGAAAAAGACAAATTAGATCACGGTCCAGAGGAGACTGTGATATTACCATGTGTGCAGACCGAAAAGGACCTTTCACCTTTGAGTTCTTGTGAATCTAAAGAGGAGTCTCAGTCCACACAAGCCCAGGAAAAGGAATTACTTGTTTCTATGGGGACTCATAATATAAACACTTTTGAACAAGGAATAAAGGAAAGGGTTATCCAAACTGCTCCACTAGTAAGGGGTCGACTTCAGAGACCCAGACCAAACTTAAGAAAGGCTGGCCAGAGACAAGTAATAGAAATTAGTGAAACCAAAGAAACAACTAAGGAAGAAAAGATGCTACAAAAAGATGAAACTGGAGAGAAATTCCTGACTGTGCCGAATTCTCAAATTGCAACCGAAACTGAAGTTGTATCCTCTGAAGTGTCAGAAGGCAGAGTGTCTGAAAACCAGAGCCACGTTCTTTTAGAAAACCTTCATATTAACAAGGTAGATGTTTTAGGTGAAAAGATGAGACATGGACATGAAACGTATGTTCCTAGTCCACCGCAAATGATAAGAAGACAGTTCCAAAGGGCTACGCCAGACTTGGGAAGAGCACAAAGTAAGAAAGAAGCATCAGACATAGAAGAAGACAGAGCAGATCAGAGGAAGGCAAGGAAGCCAGAAGACAGTTTGTCGCAGCATGAAGATTCTGACAGCCAGCTTCTTCAAAAAGGAAAACCTGAGTTTCTGACATCTCTGGAGGTTTCAGCAAGAAAAGATTCTGTAGGTTCCAAGGAGACTGAATTGGCAAAAAAAGATGATCAATCAGAAGTTGAACCATCTGGAAGTGTTGGAGAGAAGACTGGAGAGGATAATTCTGTGTGTGCAGTTGTTGAAAAGCAGTGTGTCAGTAAACCAAGCTCCCCTCAATTGTTAAAAGAACCAGATAACTCTAAAATTGCTCTGGATCGAAGAAGAGCGCTCTCTTCTGCCTCTGAGCGTGAGATAGATCGTAGTAGAAGGAGAGTACGTCGAAAGGTTAAACCCAGCGTCCCCAAAGGGCGTGGCTCAAAACGAAGCCGGACTAAGACTTCTAAGAAGGAGCCCAGAGCTTCCAGGTCTGTGCTGGTGACTCTTCGAGCTTCCCAGGAAGAAGACGAAGATGATGGTGAAGACTTTGACTATGAAGAAGAAAGCTATCATCTTGCTCCTGAAGAAGTAAACAAGGCTCCAGTGTTTGTACCTATTGGTCTCAGATCTCCCGAACCCGTTCCTGTTCAGATTGAGGAAACTATGGAAGAGCTTGTAATCCCCACGAATGTCACAGATGTAGGATGCATAACTGTTGTTGAACATCAGCTTTCATCGAACATAGATGTGATTCCTCAAGAAATGAGACAAGAAGAAAATTTGAATACATTATCAGTTGAAATGACCGTAGGTGGACATTCCCAAGCTGAAACAGAAAGTACCAACGATGGGAGCACTGAAGCTGCCATAACCCTACTGACTATGGGAGATCTGGTGCTGCAGTCAGAGATTAGCCCAGAACAGAGTGATGGAATATGTATACTTCCTGATGCTCATTCAATCGATCAAAGCCATATTCCTTTTAGCCCAGATAATGTAAATCTCAAAACTGTTCATGAATGTCAGGAACCTTCTTCATCTGTCCATAGTACATCTCCATCAGTAGAAGAAAACAAGATTGTATTGGATGTGGATAAACAGAACACTAAAGAAGAAATTGGTTTGACAGAAGAAGTAAAGGAAAATACTATATCATCCAGGACTACAACTTCTGAAGTGACCAATAATTTGAGAAAGAGAAGTAGATTTGCCAAGCCCAAGCCAAATCTTAAGAAGATTTTAGGGACCAAGAGATTTGGTGCTCATCAGAAAGTTCCTAGTTTGTTTGTAACTAAAGGAGAAGAAGTGGAAATTCAAAGAGAAACTGAGAAAAATGCTTCTCAAGAAACAGCATTAGAAGATAAAAACCTTGGGTCAGTTACAGCAACAGAGAGTACAGAGCAGAGCAAGGTGGCATCTGTACATGGTATTGAAGAGACCAGTATTTCACAAGAAACACACCTAACTGAAAGAGGTGAAGATCAAGAATGGAGATCTGAAGAAGTTCCGATATCATCAGTTGCTCCAGCTGTTTATTCTGAGTCAGGGCCCCATACAAGTGGTTTGGGCATGGGTCTTGGTGAGAGTTCTGTTGAAGAGCCTCTGGGAAAGGACTTTAATGGAGACCCTGTGCTTACACTAAATGTGCCAAAGTGTATACCAACTGGTATTCCAGAAGTCCAGCAAGAGAATGTAAACGATCTTCAAGACCTAACAGTCAATCTAGTTAATGTACATCAGGATGGTGAGGATGAACAAGCTTTCATTTTAACTCTGGTGGAAATCCCAACTCATGCAGTAGAAGAATATGCTGATAGCACTGTGCAGTTAATGCCAAATCCTTTACTGCCGGCGCCCATATTGGTCAAATCAGCGAATACAAAAGAAAGAGAAGACACGAGGAAGAGATATCATTGTAGCCTTGATGAAAGTGACCATGTGCCTCCTGCCAAAAAAACTTCACTCACTTCAATAGATGATTGTCAAAAATATACCTCTGAGGTGTGTTCAAAGGAATTAACAGATGTTTTGGAGGAAACAGGGGAGTCTTACAAGGGACAGGATATTTTCCCTACCTCAGGAAACATACAGACAATTTCAGAACCTCAGAAAGAGCAACTTGAACCAGCTTCTCAGAGTATCAGATCTGGATCTCTTGATAAAATAACAGATACACAAGAACAGAATGCATCTCAGTTACCTCAGGATGAGACAATGGTGTCTGATAAGGAAGAAAGAACTTGTACTGCTTCTGAGTCTGAACAAATGGGTAGCATCACATCGTCTTCAAACCGCCCCCTAACCAGACCTGGCAGAAGACCCCTGGGATTTTTGTCTTTAATATGTTCAAAGAATAGCTTGGACTCTGATGAAGCTACACAGGTTCATAGTAAGAAACGCCTAAAACCTGTTATACCTGTATCAAGACAAAATTTGAAAAGATCTAATCTGCCTAGTGTAAGCCAGAAAAAAACTCAAGAGTCCTCTGATGTTCCATCTCCAAGTGTTGTTGACAATACTCAACCTACGAATAATGATGGTTCAGCAACTCAGGTTTCTCATAATCGTCCCTTACCAAAAGGAGAATGTAAAGGTGGCCAAAACCGGGTGCCTGAAGAGGAGCCAACCACAGTCTCTGAATATTTCTTTAACGATATCTTTATTGAAGTGGATGAAACAGAATAGAAAATCGCCTTTTTTATTTTCTTTTTAAGTCTAGGATTTCCAGAATCAGTTATATCAACAAAGCAGTATTTAGAAAGAAGCATCACTGGCAGTTTTTCTTTAGGTTGATTTTGAGTATTTATTCAGCTTGATTTGAAGCTTTTATAATCAGTGAAAAACATTGCTGGGGTCCTTGTCATTCTGATTGGCTCAGCATTTTGGAAATATCAACCAGTTAAGACTGCTTTCTCAGACAGAAATAACAGGTCTTGTTTACATTTTGACTCTTTCTGTATTGAACACACATGAACATCCTCGAATGTTGTGGATAATGTCTGTGTAAGTCACAGTGCTGATGTATTTGGAAGTGGATTGTATTTAACGTTTAGCGAACCTTTTGTGAAGGTTTTTTTATGTTTGCGTAGGGTTTTTGTTTTTGTTTTAGGATTTTGGGGGGTTTGGGTGTTTTTTTTTAATTTTTATTTTTTAGTATGGTGAAAGTCTTTTCATTTGCCTCTAAATATATGAAAGGAAATTGTGAAACTCCAGTTTAGTATGGTAACTGTTAAAAACTTTTCTATTATCATCTATTTGACTGAAAAATGTGTATTTTTCTAATTCATATTGATGTAACATTAGTCCTAATTGAAGAACTAGTATTTAAACTTACTATTTATAAAGATAAAACATCAAAAAGCTTATTTATTTTTAAATTTTTTATTTAAAAGAATATTCAGTTTTAATTTTTTACCCCTGAGATTATGGGTAAAGAAAGCATTAACAAATTTATGTTTGTCTCCTTTCCCGCTTTAATTTTAAAGATATTTAAAGTGATATAACTAAAGTATTTGAATAGTATATATGTTTGAATACATTTTTTTCTCATAGTTCAGTATATTGACTTTGTACTGTGAATTTTTTGTTTTTCTTATTTCTTAGATAATCTCAGGATTTGTATGGGAAAAAAAAACCTTAACCTTATTTATGAGGCAAATTTCCATACAAAACTCAGTCTCCATTACATAAACATATGCTCACATACACACATTCCTTTTTTAAAAAACAATTTCTTGTTTTCTTTCCCCCATTAAATTCTCCTTAAGGACCTAAGTATGTAGGTCTTTATGGACAGAGCATAATTGAGATGTTAAAAACAGAAAATAAGATCACAATAAGCGTTTATTAAGTCAGTGATTATCATCAATATGAATTTATGGGTTGGGTTTAAATTTTGAGATTTTGTGATTTACGTAGGTAATTCCTTTATCCACCCAAGCAAATCTTTGTGGTTCAAATTAAACTTCTGAAAAAACAGAATTATTCTTTTATATGAAAAGCCCTCTGGGTTGATAATGCCTTGGATCAGGAATCAGAAACATTTTCTGCAAAAATATTTTCGAATCCGTGGGCCAGATGCCTTCTGTGGTAACTACTCGACTCTGCCACTTCAGTATGAAAACAGCCACAGGCAATACTTACACGATGGGCATAGATGGGTTGGCCCCTGTATTAGACAGTAGTTTTCCTATCTTAAGGTGCTGATGTCATTACCTATGAGATATTTGTCCCGAAATGATGAGTTGTGCCTAACAAAGAAAACTGTTGATTGCATTATGAAATCAGTATTTCAGTTGGGAAGATATTCTAATGTCTAATTATGTTTGTAAATTGAAAATTATAAAAAATGGTGACCAGTTTTCAGGTTCACTAGTAAAACTGGATTTAGCTTGGCAAGTATAACGGTAATCCTAATGTATTAAAACAATTGATATTAGAACATTTCTTATTCATTGCCTTATAGTGAAATTTACAGTTTAAACTTTTTTGTCATAAAGGAGGATTTAGAAGGAAATTCTCTATAGATACGCATTTATTTATTTCATGTGATTAATATGTTACAAAAACCATGGTCGTAAATCACATTGCTATTTTAAATGCCGTTTTTATACATTTTAAAAGTCTCATTCTGAAAAAGTTTCTTTAGTTCATGTTAGTTTAGGTGTTAGGTTGTCATAGCTAAACTATGATTTTATCCCTTGTTTAATATAACTTTAAATGTGTTAACATCTGTCTCTTGTTCATCTACAATGAGTCAATTTTGTGGAAGATGTAACTTCTTACTGTATAAAGGATAATTTTATCTTTGGGCATTCATTGCATTAGAGAATCAAGTCAGCTAAATTCTCCTACTGTTATATCCTTAAAACTACTCTTAGAAAAAGAAAATCAGTGTAATTTACCTTACAAGGGGGAAAGACTTGTTCACACCTGTGTTTAATCTGACTCATATAAAGATCATGTGAAGAATTTGTATTTTATAAATTTTCAAAGAGATATGATTAAAGGTCTTTATTTTTTTCTTGTCTTTTCCTCCTGAACACTTATATCTTAGCAAGTGATCAACATGATGACTTAAAAGCCTAATTGTTGGTAAATGATTGAGGCACAGATAAAAATATGATATCCACTGCTTACCACCATGTTTTTTGAAATATAGGTCACCATGTATATTATCTTGCTTAAAGAAGTCTTTGACAAAAAGCAATATCTGTCATTGTAAATTTTCTTGTTCTAAAGAAAGCAGTTATATATTCTGTAGGTGTAAATTATGTAAATAAAAGTTATTTTATATTATT EMBV3_39769 AAGTCAGGCTGGAAGATTTGCCGGGAAGGCACCCTGCTCTTCAGCAGAACCACTACCCCC Variant GeneID:512369|STARD4:NM_001080265:27_cdna 128^310 2 EMBV3_08488 GeneID:512369 21 GENE STARD4 MGC155130 STARD5 StAR-related lipid transfer (START) domain containing 4 EMBV3_36749 GCTGAAGCCAGGGTGCCCACAGAGATTTGGAGCTTTGTTGTTGAAGCTCTACCTCAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02641 AAGCCATCAAGGCAGCTAAGGGTTAGACCTGGTTGACTCTATAAACTTGATAAATGCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02610 ACCAGTCGGAGCTTTGGACTCAACTGCGTGACCCGTCCCCAACGATGATATTGTGTTTCA Gene GeneID:511854|FBLN2:XM_002697131:65_cdna Constitutive 0 NULL GeneID:511854 22 GENE FBLN2 NULL fibulin 2 EMBV3_17798 TGGGGTTTGAGGATCTTTTGACTGAGAATCTACGTGCTCTCGTTTTGACAGCCATTCCTG Gene GeneID:782902|VSTM2A:NM_001083528:2_cdna UTR3_Alt 3 NULL GeneID:782902 4 GENE VSTM2A MGC142894 V-set and transmembrane domain containing 2A EMBV3_02896 CAGCGGGCCTCTCAGATATGCCATCTATGGGGGCAGGACACCGCCGCTTTCGCTGCCAAG Variant GeneID:508609|PXMP2:NM_001046008:102_cdna 257^419 2 EMBV3_31083 GeneID:508609 17 GENE PXMP2 MGC137246 peroxisomal membrane protein 2, 22kDa EMBV3_29498 CCCAAGCTCAACCAAGCCAATGCAGATTTCAGACTCTCAGACTTCCACCAAAGAAGAAGC Gene GeneID:286855|MTFMT:NM_001166523:53_cdna Constitutive 2 NULL GeneID:286855 10 GENE MTFMT NULL mitochondrial methionyl-tRNA formyltransferase EMBV3_21052 CCTCGGCCAGGGGATTTGATTGAAGTGTTTCGTCCTTGTTATCAACATTGGGCACTGTAC Gene GeneID:540539|HRASLS:NM_001076225:114_cdna UTR3_Alt 2 NULL GeneID:540539 1 GENE HRASLS NULL HRAS-like suppressor EMBV3_05160 GTTCAGCCTGTCATATTTTTTGCATTGGTCATTATGGATACCAGACCATTTGTAAGTGTG Gene GeneID:537932|UBR3:XM_002685283:73_cdna UTR3_Alt 2 NULL GeneID:537932 2 GENE UBR3 NULL ubiquitin protein ligase E3 component n-recognin 3 (putative) EMBV3_29591 TGCTGCCACAAAGAGTGTAAAGTGCTTCAATTCAACAGCTGAGGGAAGCCAAGTGATCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13652 TGCTTCCTGGACAGAGAGGAGGTCAAAGGACTAGTATGTCTCCCTGCTACCACTGTCTCT Gene GeneID:527362|LOC527362:XM_002690737:451_cdna Constitutive 0 NULL GeneID:527362 10 GENE LOC527362 NULL similar to Protein SOLO EMBV3_02055 GTCCAGAAACTTAGCAAAACCCACAGTAAGAATGTCTTCCCTCCTGAGCAGCAGTCCGAG Gene GeneID:540683|VPS13D:XM_002694053:149_cdna Constitutive 0 NULL GeneID:540683 16 GENE VPS13D NULL vacuolar protein sorting 13 homolog D (S. cerevisiae) EMBV3_38017 GAACTATGGACAGAGGTTCGTGACATTGTACAGGAGGCAGGGATAAAGACCATCCCCAAG Gene BVV0102_449658 - 1 EMBV3_39757 GK000015.2:83515103-83568479 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229800 TCONS_00060488 TCONS_00178770 TCONS_00060490 TCONS_00180221 TCONS_00109778 TCONS_00011186 TCONS_00031400 TCONS_00251947 TCONS_00167835 TCONS_00188878 TCONS_00058086 TCONS_00188502 TCONS_00208722 TCONS_00069870 TCONS_00238934 TCONS_00030069 TCONS_00198560 TCONS_00126152 TCONS_00207975 TCONS_00057947 TCONS_00185761 TCONS_00141164 TCONS_00232261 TCONS_00072630 TCONS_00156644 TCONS_00251769 TCONS_00238479 TCONS_00066197 TCONS_00023656 TCONS_00102592 TCONS_00024385 TCONS_00038157 TCONS_00147918 TCONS_00126150 TCONS_00029761 TCONS_00100623 TCONS_00060492 TCONS_00126154 TCONS_00008986 TCONS_00170142 TCONS_00116551 TCONS_00248101 TCONS_00080543 TCONS_00069871 TCONS_00252153 TCONS_00238718 TCONS_00021773 TCONS_00060495 TCONS_00047023 TCONS_00148150 TCONS_00179595 TCONS_00107388 TCONS_00008556 TCONS_00060491 TCONS_00049685 TCONS_00081014 TCONS_00222370 TCONS_00060497 TCONS_00147917 TCONS_00240565 TCONS_00123871 TCONS_00122398 TCONS_00190425 TCONS_00188337 TCONS_00060493 TCONS_00188712 TCONS_00089257 TCONS_00060496 TCONS_00176206 TCONS_00198269 TCONS_00109156 TCONS_00023639 TCONS_00028149 TCONS_00063565 TCONS_00248828 TCONS_00060489 TCONS_00072495 TCONS_00177914 TCONS_00231294 TCONS_00149641 TCONS_00079587 TCONS_00201666 TCONS_00111187 72 XLOC_139294 XLOC_036754 XLOC_108543 XLOC_109990 XLOC_065682 XLOC_006737 XLOC_017648 XLOC_154888 XLOC_102671 XLOC_114919 XLOC_035883 XLOC_114545 XLOC_127234 XLOC_042073 XLOC_145600 XLOC_016324 XLOC_120214 XLOC_077380 XLOC_126489 XLOC_035744 XLOC_111814 XLOC_085592 XLOC_141747 XLOC_044398 XLOC_095104 XLOC_154710 XLOC_145146 XLOC_040914 XLOC_014323 XLOC_061901 XLOC_014494 XLOC_021983 XLOC_089803 XLOC_016019 XLOC_060865 XLOC_004543 XLOC_103517 XLOC_070718 XLOC_151488 XLOC_049427 XLOC_155094 XLOC_145385 XLOC_012446 XLOC_027160 XLOC_090033 XLOC_109367 XLOC_063298 XLOC_004113 XLOC_029816 XLOC_049896 XLOC_135679 XLOC_147229 XLOC_075423 XLOC_073953 XLOC_116460 XLOC_114380 XLOC_114753 XLOC_054042 XLOC_105985 XLOC_119926 XLOC_065061 XLOC_014306 XLOC_015421 XLOC_038292 XLOC_151771 XLOC_044263 XLOC_107687 XLOC_140783 XLOC_091515 XLOC_048472 XLOC_123311 XLOC_067087 Coding TCONS_00122398 XLOC_073953 Coding Coding - 21:7014236-7017701 - TSS91157 3465 2 TCONS_00122398_6 162 0.999134199134199 1 0 0.000585063789679719 0.00133028532566571 0.000609788916453181 0.000624308497602406 0.00073401160528929 0.000200252401671131 0.000626425269143257 0.000349032436503999 0.00159392940138531 7.83712933799993e-05 3.93092567665752e-05 1.24693152206138e-06 0.000143947124633393 0.000278438333232553 0.000169534072105345 4.57343504794127e-05 0 0 0.000637588180278657 0.000974569220305688 0.000302463247050511 5.35402974725164e-06 0 4.83829113148253e-06 0.000540658716267424 0.000418807931195365 0.00054565641174357 1.38603259552188e-05 4.20312405404202e-06 2.31351667898023e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1353 84.88 0.333621933621934 NR_047679.1 UGDH-AS1 Homo sapiens UGDH antisense RNA 1 (UGDH-AS1), non-coding RNA. 3e-58 232 68.22 0.192784992784993 TCONS_00122398_6 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-06 47.8 22.86 0.777777777777778 1 coding 0 0 0 0 -0.771351067419945 0.0405011737901622 0.0376261617141226 0.472326582819497 NNATTTTTTCATTTGTAATTTTTTTGATTTGGGTCCTTTCTTTTTTCCTTGGTTAGTCTAGCCAAAGATTTGTCTAATTTTGTTTATCTTTTCGAAGATCCAGTTTTTAGTTTCTTATCTTTTTAGTCTCTATTTCATTTTATCTCCTCTAATCTTTCTTTCCTTTCTTCAACTAACTTTGAACTTAATTTATTCTTCTTTCTGTAGTTCTTTGAGGTGTAAAGTTAGGTGGTTTATTTGAATTATTTCTTAATGTAGGTGTCTATTGCTGTGTGTTTTCCTCTTAGATCTGCTTTCTCTGCAACACATACATTTTGATACGTTGTGTTTTCATTTTGGTTTGTGTCAAGAAACTTATCTGTCTCTCTTTAAAAAGATCATATACCATGATCAAGTCAGATTTGTTCCAGGAATGCAATAATTCTTCCATATATGCAAATCAATCAATGTGATACACCATGTTAACAAATTTAAAGCTAACCATATGATAATCTCAATAGATGCAGAAAAAGCTTTTGACACAATTCAACCCCATTTATGATTAAAAAAAACTCCTTAAAAAATGGGTACAGAAGGAACCTACCTTAACATAATAAAGGTCATATACAACAAACACAGCAAACCTTATTCTAAATAGTGAAAACCTGAAAGCATTCCCTCTGAAATCAGGAACAAGACAAGGGTGCCCACTCTCACCATTATTACTCAACATAATTTTGGGAATCCTAACTATGGCAGTCTGAGAAGAAAAAGAATAAATGGAATCCAGATTGGAAAGAAAGAAGTAAAACTCTCACTATTTGCAGATGACAGATTCAAATAGATGACTGTTTACAGATACTGTACATAGAAAACCCTAAAGATACTGTCAGAAAATTATAGAGCTAATCGGTGAATTTAGTAGCATTGCAGGATACAAAATCAATACACAGAAATCACTTGCATTCCTATACACTAAAAATGAAAAATCAGAGAAATTAAGGAATCAATCCTACTTACTATTGCAACAAAAAGAATAGAATATCTAGGAATAAACTTATCTAAGGAGACATGTAAAGATGCTGTAAAGAACAATATCGCATAGGAACCTGGAATGTTAGGTCCATCAATCAAGGTAAATTGGAAGTGGTCAAACAGGAGATGGCAAACGTGAAAATGGACATTTTAGGAATCAGTGAATTAAAATGGACTGGAATGGGCAAATTAACTCAGTTGACCATTATATCTACTACTGTGGGCAAGAATCCCTTTGAAGAAATGGGGTAGCCCTCATAGTCAAAAAGAGTCTGAAATGCAGTTCTTGTTTGCAATCTCAAAAACGACAGGATGATCTCTGTTCATTTCCAAGGCAAACCATTCAATATCATAGTAATCCAAGTCTATGCCCAAGCAGTAATGCTGAAGAGCAAGTTGAACAGTTTTATGAAGACATGCAAAACCTAGGACTAACACCCTAAAACGATGTCCTTTTCATCATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAGATACTGGAGTAACAGGCAAATTTGGCCTTGGAATACAAAATGAAGCAGGGCAAAGAGTTTTGCCAAGCAAATGCACTGGTCATAGTAAACACCCTCTTCCAACAACACCAGAGACGACTCTACACATGGACATCACCAGATGGTCAATACTGAAATCAGATTGATTATATTCTTCACAGCCAAAGATGGAGAAGCTCTGTACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGTCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTTAAATTGAAGAAGTAGGGAAAACCACTAGTCCATTCAGGTATGACCTATATCAATCCCTTATGGTTATACAGTGGAAGTGACAAATAGATAAGGGATTAGATCTGATAGACAGAGCACCTGAAGAACTATGGACAGAGGTTCGTGACATTGTACAGGAGGCAGGGATCAAGACCATCCTCAAGAAGAAGAACTGCAAAAAGGCAAAATGGTTATCTGAGGAGGCCTTACAAATAGCTGAGAAAAGAAGAGAAGTGAAAGGCAAAGGAGAAAAGGAAAGATATACCCATTTGAATGAAGAGTTCCAAAGAATAGCAAGGAGAAATCAGAAAGCCTTCCTCAGTGATCAATGCAAGGAAATGGAAACAATAGAATGGGAAAGACTAGAGATCTTTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGCAAAGATGGGCACAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACAAAGAAGAACTATACAAAAAAGATCTTCATGACCCAGATAATCACGATGGTGTGATCAGTCACCTAGAGCCAGACACCCTGGAGTCTGAAGTCAAGTGGACCTTAGGAAGCACCACCACAAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTTCAAACCCTAAAAGATGATGCTGTTAAAGTGCTGCACTCAATATGCCAGCATATCTGGAAAACTCAGCAGTGGCCACAGGACCAGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAGGTTCAAACTACCACACAGTTGCACTCATCTCATATGCTAGCAAAGTAATGCGCAAAATTCTCCAAGTCAGTCTTCAACAGTATGTAAACTGTGAACTTCCAGATGTTCAAGCTGGATTTAGAATAGGCAGAGAAACCAGAAATAAAATTGCCAACATCTGTTGGGTCATTGAAACAGCAAGAGCATTCCAGAAAAATACCTGTTTCTGCTTTATTAACTACGCCAAAGCCTTTGACTGTGTAGATCACAACAAACTGGAAAATTCTGTAAGAGATGGTAACCAGATCACCTGACCTGCCTCCTGAGAAACCTATATGCGGGTTAGGAAGCAACAGTTAGAACTGGGCATAGAACAACAGACTGGTTCCAAATCGGGAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATGCAAAATGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAACCTCAGATACACAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAGAGTCTCGAGGATAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAACATTCAGAAAACTAAGATGGCATCTTGTCCCATCACTTCATGGCAAATAGATGGGGAAACAATGTAAACAGTGACAGACTTTATTTGGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGTCTGCTCTTTGGAAGAAAAGCTATGACCAACCTAGACAGCATGTTAAAAAACAGAGACGTTACTTTGCTGACCAAAGTCCATCTAGTCAAAGCTATGGTTTTACCAGTAGTCATGTATGAATGTGAGAGTTGGACTATAAAGAAAGCTGAGCACCAAAGAAT TCONS_00120438 . 5' 2125 TCONS_00120438 . 5' 2125 EMBV3_42210 TTTCATTCTCTCCACCTTTTGAAATGTCATGCTCAGCTGGGCGATCCAGGAAGGGCGCTG Gene GeneID:100125921|TMEM9:NM_001105491:398_cdna Constitutive 0 NULL GeneID:100125921 16 GENE TMEM9 MGC165854 transmembrane protein 9 EMBV3_41864 GCCTGAGACCATCCCGAAACCCTCCTGATGTTGGCCAGTTGAAGATGAACTTAGTGGACA Gene GeneID:523970|TRAK2:XM_002685509:37_cdna Constitutive 1 NULL GeneID:523970 2 GENE TRAK2 NULL trafficking protein, kinesin binding 2 EMBV3_41385 GTCACGGGGAACGCCAAAAAGCTGGAGGAGGTCTCCACCAGCTCCTGGAGGGGTTCCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15055 CTTCACTACCAATAGAGGGCACTCCAGCGCCACAAATGCCACATTCCAGAAAATAACAGC Gene GeneID:540728|THEX1:NM_001038192:13_cdna Constitutive 0 NULL GeneID:540728 27 GENE THEX1 MGC134299 three prime histone mRNA exonuclease 1 EMBV3_37443 TGCTTCTTTGTGCCACTAGGTGCTGCCCTGCAGCGTGGTCCAGAGAATGTGCCCTAAGAA Gene GeneID:525506|DAPK3:NM_001101124:39_cdna Constitutive 0 NULL GeneID:525506 7 GENE DAPK3 NULL death-associated protein kinase 3 EMBV3_29728 CCGCCCTCCAGCGCCGGGCTGTTCCCTAGGAACATCCCAGGGAGCTCCACAGGGTCCCCT Variant GeneID:510184|TADA3:NM_001024511:74_cdna 118^161 1 EMBV3_27427 GeneID:510184 22 GENE TADA3 MGC133915 TADA3L transcriptional adaptor 3 EMBV3_26719 TGAGCAGATCAACCAGGTGGTGCTGGAGGCGTGGCTTCCCGGATCGCCTTCTTCCTCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08156 TCCACTTCCTCACAGAGTGTGATTTGGTATCTTCAGAACTCTGGGGGCCACCTCATACAG Gene GeneID:100297248|LOC100297248:XM_002690621:32_cdna Constitutive 0 NULL GeneID:100297248 10 GENE LOC100297248 NULL hypothetical protein LOC100297248 EMBV3_01371 CGTTCAATCTCAGGGTCTGTGGACAAAATGGGAAACTTTGAACATTGCTGACAAGTTGTC Gene BVV0102_028753 + 0 NULL GK000019.2:47027389-47043849 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18618 GGCTCGAGTAGAAGTACTCATTGAAACAATAACAAAGTCTACCTGTGAGGAAAATATGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07740 GGGACGCGATGTCCAGTTATTAGAATGGATAAAGCAGCACTGCCGTGAATGGGTGACAAG Gene GeneID:524181|LOC524181:XM_002684720:35_cdna Constitutive 0 NULL GeneID:524181 1 GENE LOC524181 NULL similar to CG10038 CG10038-PB EMBV3_32616 AGAGCCTTTGGCCCTCTCTTTGGGAGCTGGTGAATATTGTGTACCTAGAGGAAATCGCAG Gene GeneID:767968|BEX2:NM_001077034:11_cdna Constitutive 0 NULL GeneID:767968 X GENE BEX2 BEX1 MGC133543 brain expressed X-linked 2 EMBV3_23708 GATGTACTCACTGTTAATTAGGGAATCAATTTAATCTCTGAAGGAAGACAATATACAGTC Gene GeneID:787125|C6orf173:NM_001111261:2_cdna Constitutive 0 NULL GeneID:787125 9 GENE C6orf173 CUG2 MGC148833 chromosome 6 open reading frame 173 EMBV3_39994 TGGCCCCTCTCAGAGATGAAATAGACAAGGGCCAAACAGGAGACCTAACAGGATGGTCAT Gene BVT0102_083013 + 1 EMBV3_28034 GK000007.2:22580778-22629691 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091375 TCONS_00212497 TCONS_00236492 TCONS_00073006 TCONS_00212496 TCONS_00227591 TCONS_00049203 TCONS_00236493 TCONS_00227592 TCONS_00110223 TCONS_00194097 8 XLOC_056150 XLOC_130205 XLOC_144487 XLOC_044774 XLOC_138276 XLOC_029334 XLOC_066127 XLOC_117668 Coding TCONS_00236493 XLOC_144487 Coding Coding - 9:102856484-102863499 - TSS177028 7015 5 TCONS_00236493_4 76 0.567925873129009 1 0 3.97645540875307e-15 0 0 2.17435036003478e-39 4.88687722887301e-55 0 1.03915038046126e-07 2.07140102044331e-23 9.3295249672518e-11 1.77299743298113e-06 3.09042650140296e-06 8.90300615628516e-08 1.32449227359043e-39 8.96038913629766e-07 1.25378282811598e-06 0.000756992824332693 0.000769003880254607 0.000384330000503998 0 2.39667605693256e-07 0 0.000324188999165058 0.00108171441641392 0.000940257489823256 5.65407226928089e-12 1.3924612576666e-24 2.87873794668579e-20 0.000126891872848127 0.000127231725590383 9.00267811896369e-06 XM_586393.5 LOC539314 PREDICTED: Bos taurus baculoviral IAP repeat-containing protein 2-like (LOC539314), mRNA. 0.0 901 82.67 0.125588025659301 TCONS_00236493_15 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 8e-17 75.1 82.93 0.625 0 noncoding 0 0 1 0 -0.0634763098661241 0.542062392107212 -0.00898073873661262 0.84383565110183 GGTCAAAAGGAGACACCGCGTGTCCGTCCACTTCCCAGAATCCCTCTCGCCAGCATCCATCTTGGCTGAGCGATGCGTGCACCACCAGGAAAGACTCTGAATTAGAATGATTGGCCAAAGACCACCCGGAAACTAATCCCATCACCATAAAACCGGAGATTGCGAGCCACGCGGCAGAGCAGTTCTCCTGTGTTCCCTTACCTATTGCTCTCCACCCGGGCGTCCTTTCCCAGTAGAGTTTCTTGCTTTGTCAGCACATTTGTCTCCTCGGACAATTCATTCCCGAGTGTTAGACAAGAGCCCAGTTTCAGGCCCTGGAAGGGGTCCGTCTTCCTGCAACAAATGGCGACTCTGGCGAGGACTCTTCTTTGCTGAGACTGACATCCCGACCACTCGGGGTACTCAGGGGCCAGCTTGCCTGCCAATGGACCAGACCCAACAGCCGTAACTGGGACCCTTTTGTCCCTGGTCTCCTCCTGACGCAGACAACTGGCCAGAGTGCCCCGACTGGTAAGGAACAAGAGACTTTATTGACCTCTCTCCCCTTCCCTCACTCTTTCTTCTCCAAGAGACTTTATTGACCTCTCTCCCGTTCCCTCACTCTTTCTCTCCTTAACCCTTCCTATCCTTCCCCGTTTTTCTAGTCCCCCGGTCCTGGACACAGGAATCTGGTCAAAGGACCTTCAGCCTGAGCTGAGGATTGGAGACTGATCACCTCCTCTTGGCAGAGAACTCGAATTCTGGTTCTGGCCTGGTCTGGTTTCTGGCAGGGCCGAGTTCCAGCCCTCTCTTCTCTGGAGGCCCAGGGGAAAGTCCCATAACGCCTGGGTATCTGCAGGTGGCAGGAGCCGTCTGTAAGGCCACCCCTTTCGCCCCCCTCTCCCGCCTCCTCCCGCTTCTTCTTTCAACCTGGCTTCCTTTCCTGCCTTTGAAATCTTTGATGTTAGTACTTGGGTCTGAAGTTGTGTCTCTATAGGAGGTTTTCTGAGAGACTGTATTCTTGTATTTAAGGGAGTGTCTGACGACATGCCAGGTTTACATGTGTGTGTTTTAACTCTGTGTTCTGTGTTGTGATTTTTCATGACCATTTTGCTTTGTCTGGCCGCCATTTGGTTTAGACCTGCCGCCATTTCGTTAGAACTTGATTTTCTTTCCCTGTGCCTTGAGACCAGGGCTCTCAGGAACACTTATCTAGACCATCTCTAACTCCTGAGATTGAGAGAAAAGGGGAAAAAGACTTTAAAATTTTTACTTATTTCAATTTTTTTTTATAAACTAGTAAATTTTATATTGTAATATCTAATTCGTGACTAAACTTAGAAAATGAAGCCAGATCTTGCACTGTGTCTGTCTAAATATGTCTTGGTATGTCTTTGTCTCTGGGTAATATTTTGAGGTTAATTTGTAAATGAGCTCTATTTATTTGGCTTAAAAAAAGTAAGCACTTACAAATCAAATAATTCTAAATTAAACAATAAATTCCAGGTTCATGTGAACTGGGAAATATTCAGTATTAAATACCTGATATTAATGTTTGTTTGTTGACCTATCTAATATAGACATGTCTTAGAGTAATTAAGTAGAATATTTTCATTGTACCTAGGTTTAATATAAGTTAAATATTATATCTGTTACAAGTTTATCAACAAGGAAATTACCTCGAGTGAAGAGACTTCTAAAAAAATGTAAATGAGATATGAGCTTTTATATAAACTCTATTAAGAATAATTATTCTTTAGAAATATCTGTCTAAAATAGTCTCTCCAGATTGGCGTAACTTAAATTTCTGAGGGTTGTGCCAAGTGTGCTAAGTGTTGGAAGTCTATTGAATAGTTAGGTCATTTCCAAATAAGATTTTGAAACATTTGCTACTAAACACTAATTTCCTTTTACAGAGAAACTAAAGAGATGTGGGACTATAAATGAATAATGCTTGGTGCCATCCTAAATGTTGTAAGAAAGCAAGGGTTTTAGAAATTATCACTGGTATTTATGCTCACCAATCTATAAAATGCTAATATAAAATTCTTGGTTGCTGAATGAAAGTACAAAGTGTGTTTTCAGTAAAAAAAAAAGAAAGAAAAAGGTATGAAAAATACTACAAAGAGTTATGCATGATCAGGATTTTCTAAAATTGGATTACAATTAGATAAATGAATTTTGTTAGATATGACACAGCCATAAGAAAACTGGTTAGAGTCAGCTGGGCCCAAGATGGCGGAGCTGACTCTCACTAGACTTTGAGCCGTGGTATTTACGCCCATTGTGACATATCAGCAAGCCCGTCAACACGGACTAAATCTGACCAATGTTCTAAACCCCTTTAATTGATCTTTTCCATAAGACTTCCTAAATAGAATTCTTTTGAAGTTCTTTCGACCTCTAGCTAACTTTGGGGTGCTTCAGAGGGCCCCTGAAACATCCCAAAGAGCGATATTAAACTGTGTTTATTTGGTTGGTTAAATTACATGAAAAAGATTATCAAATGAGTAATAAATCCGCTCATGTTATAATGTATGGTAAAATTACTAATACAGATATCCTAGAAATTATATGGTGTTCTTAACATTCTGATATGTCCTGGTATTCTAATGAAAAACCTGATGACTTCACAAAAGTTAACAGAAGGACTGAATGAACCAGTGAATATGCTTATAACTTTTATGGTTTCTATCTGAAAAATGATTGGTTTTCAGGGAGTAGGGAAAACCTTCCTCTCAAACGAATTATGACAATACTTTGGTAAAATTAAACGTTATAAACAAAGCCATTATATTTTCTCTCTATCTGACTCCTCCAGAAATTTGAAATTCTTAGGTTTCCAGTAAGTTTATCAAATGAGTTAGGAATGTTATGGGTACAAAAATCTCAAGAAATTTTTGAGAACTTAAAAAGGGAAGCATTCAACTAGATTTGTTAGGCAAAATCTGTTATAAGCCTTTGGTGTGAGTTTCCCAGCCCTCTTTTATTTTAAAAGTCCAGTCTGAGACTCTATAAATGTTTCGGCAAAATAAAAAGTCTATAGTCAATTATGGTTATATAAATCATCAGACCAAAATTAGTGAGAACAGACCTATTTTGCAAACAAACTAGCCTTAATTTGGTTATATTTGATTTAAATGAGGGTAATTTTAGGGAGAAAAAGATATTTCAAAAAATGTTAAATCCCAGTTTGTTAATGGGGGTCTGCATCTAGTAAGACTCATCTCTTAGATAGTTCTTTGCTGTTACGTGATATTAATGTAAAATTTAATTGAATTCTTAAAGAACACCCTAAGTTTGTTTCTGAAGCTTATTTCAGTTTGTTTCTGAAGGTTATCTATCTTTGGATGAAGATCAGATGCCTCATGACCTGCAACCAGGACTGGAAAAAGACATAATTTAAGGGACTGTCTCCAACCTGGATGGAAGGACTTTTTTACCAGGTACTCTTAACTAGCTCATGCACAATGAAACTGAAGGGAAATTAACTCTTAGATTATTTCCCACTTCCAAAGGCCCCTACAGTGGATTGGTCTATAGAGAAGACAGCTGACCTGATCTCACCTTAAAATGATGCTCAAGCAGGAGAAACTACACTACACCAGGATGAGAAGACGATGACATCAGAGGTAGGCAGCTTGCCCGAGATGCTGGACCTGATTCGTATGATCATTTATGTTTTCTTGACTTCTTAGACCTTTGCATATAAATCAAATCCTTTTCTATCATAGGCCTGATTCTATGCTAGTTTTAAAAATCAATTCAATTGTTGGGTTTGTGGCCAATTACCTGTGTCTAGTTCTGGGTTACCTTGTTAAATTTCTCTACTACAAGACTCTAACTGGTTGGCCCTGAGAAAATTTACTTAAAAAAACAATTATAGTCATATTCAGGTTACTGTGATGTTACTATATGGGATCCCCTCACCGGGCCAATTAATAATGCCTGCTCTGACTCTGGCCATAAATTTGAGCCTTTATCTATTACTCAAGCACAATCAGAGCAACAAGTAAAGTTTCAGCAAAGGAGGAAAAATCTACCACAATTATGGGATGGATTTATATAGATAACACCAGGCTATGGTAATTTAGGTTTAAAGTCTCCTCTGTGTTGGAAACAATTAAATCATACTAAGGATAATCACTCTAGTAACACTAGAAAACTGGGCTATGTGCCTTATAGACAGTGGTGCCAATATATAATTTCCCTAGAAGATAAAGATTCTACAGAGCAGACTAAGTCAGATGACCTGAGATCTACTGGGCTATATCTAATGGAAGCTCTTAAGTCTTCCTTGTGACTTTACTAATACTGCTGGCTATGTTCTTTGTATTTCACCTGTTTTACAAATTTACTGTTTCTTACACCGTCAAATGCGTGTGTGAGGCCTCTAACAGAATAATATATAGTGCCAATAAGATCGATGATGGTAACAGTGTAACTCTAGATATGGGGAGAAGCAACAAGACGGGATATTTTCCTGGACCAAGAGGCTGGCAAGACAGGTGGTCCAGAGAATTTTGGATACTGTTTCATGGCCTAGTCCAGTAACAGCACATTGAGTGGCCTGTCAACAAAATCTTTGCCAAACCTGAGAATGGACGTTCTCAGCACCGTGGGATAAAATGGTCATGAAATGCCCCCCTCAAAATCATGGTCAAGTTTATGAGCAAGAGAGGGCTCTGCCAACTGAAGACTGACACTTGCCGGCTTCATCTACAAAGATTAAATCATGGCCACTGAAACTGCTGACTTTCAACGCCCCTGAAAGGAGTTCAGGGTGAAAACCAGGAATGGGGCACTCTGTGCTCTGGGAAAAACTGGCATAACAGGCCTTCAGATAGTTATATCTTTTCAGGAGAAGATTTTATGAGTCCCAATTCTTGCATCTTCTCATACCTAGAGGAACACTGGCGTCATTAATGGTGAAATCTGCTTTGGCTAACTAGGTGATGCCATGGGTGTACTTTCCGATTAGACCTTGTGTTGCTAAACACTTGCGTTTTCTGAGTCGTGTCAGGCTTGGATGCCACCATTCTCAAAACAATGTCTGCTGGAAGCTGGTAACTGCAATCTTTTTATAAAACTAGGCAACTGGCTACAAGTCTCCCTGAAGTGCCAGGTCCAGACTGGGTTTCAGGCCTATTCTTCTAAAAAGAAATGAGATTTATTTTGTCTACTAAATTCCAGTTTTCACTCCTCCAACTACTTCTAATTGGGTCTGTTACACCAAAATGGCAGACCAAGGGACTGAGATTTTAATCATATAAGACTCAGATCTAGAACTTGGAACTCAGAAATACTTCCAATTCAGTGTTTATACTCCAAGCTGAGGCAGTCTTATGCTCCATTTTGACAGGAAGTTATTACAGTCATAGTTGCCTGCTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCCAACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCAGGAAAGTGAAAATTGAAAGTGAAGTCACTCAGTCGTGTCCGACTCTAGCGACCCCATGGACTGCAGCCCACCAGCCTCCTCCGTCCGTGGGATTTTCCAGGCAAGAGCACTGGAGTGGGGTGACAAACGCAGTAGAACTCTGTGGGGCTCTGGAGTGAGATCTGTTCTGTGTCCTCCATTTCTTGTCTGTAGGATATAGGCTTCATTCAGCCTCCTTGACCTTCCCTGAGCTCCAAAGGGTGGATTCAAACAATTGCTAATCAGGGAAGGGAGGGGATACAGAAACCGGAGAAACAATCAAAGGTTGGTGCAGCCTCCAGACAGAGTCCTGGTTCCTACTCAAAGGAATATGCAGAACAATGTCTTTGCGCCCCCACCCAGGTCGGGACGGTAACTTCAGACTGAACTCAAGATTCCTGGAGCACAGCTCTGTTGCCTCACCACCAACCAATCCAAAAGGGTCACAAACCCTGCAGCCCTCACCCCAAATGTTGCCTCCTGTTTCCGGGGACCAGAGATAACCATCCTGTTAGGTCTCCTGTTTGGCCCTTGTCTATTTCATCTCTGAGAGGGGCAAACAGTTTCAGACTAAATTGCTGTTATTATAACGGTGAATGCTGGTTTCAGGCAAAAAATAATCTTGACTTAGATCTGGTAGAGAAAGACTTCTGCTCTGCGAGGCAGGCTATGCCCATGCACAGCAGGAAGAAGTTACGGAAGAAAGAGACCTCCGCCCCAATTCCCAAGAAGTATCTTGAGTATGAAGTCTCTCGGGGGGAGTTGTTAGGGGAAGCACACTGATTGAAACCGCCCACCCTGGCCAGGCACCATAGTAACCATTTGCATGAGTTGTTTTATGACAGGAGATCCTGATAAGGAATACAGAACTAATGAGCCACCACCAACAGGAAGAGTTCGGGAAAGGTCAAAAGGAGACACCGCGTGTCTGTCCACTTCCCAGAATCCCTCTCGCCAGCATCCATCTTGGCTGAGAGATGCGTGCACCACCAGGAAAGACTCTGAATTAGAATGATTGGCCAAAGACCACCCGGAAACTGATCTCATCATCATAAAACCCGAGACTTCGAGCCACATGGCAGAGCAGCTCTCCTGGGTTCCCTTACCCTACTGCTCTCCACCTGGGCGCCCTTTCCCAATAAATCTCTTGCTTTGTCAGCACATGTGTCTCCTCGGACAATTCATTCCGAGTGTTAGACAAGAGCCCGGTTTCGGGCCCTGGAAGGGGTCCTCCTTCCTGCAACAATTCTAGGAATCAGCAAACAACTAAAATGGACTGGAATGAGTGAATTTAGCTCAGATGACCATTATATCCACTACTGCGGGCTGGAATCCCTTAGAAGAAATGGAGTGGCCATCATGGTCAACAAGAGTCCAAAATGCAGTACTTGGATACAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATATCACAGTAATCCAAGTCTATGCCCCAACCAGTAACGCTGAAG TCONS_00238213 TCONS_00238214 TCONS_00238215 TCONS_00238216 TCONS_00238217 r 5' 13987 TCONS_00238213 TCONS_00238214 TCONS_00238215 TCONS_00238216 TCONS_00238217 r 5' 13987 EMBV3_18026 CTCCATATTTGGGGATGTGGTAGAGACTGAAGGTGCCTTTCGGGCAACAGTACCCTAGCT Gene GeneID:514643|SSH3:NM_001102006:625_cdna Constitutive 0 NULL GeneID:514643 29 GENE SSH3 MGC143164 slingshot homolog 3 (Drosophila) EMBV3_40531 GAATCCCCGTACCTGTGGCGTGTTGGTCCTGGCATCATTTTTCATCAGCTTTTTGACCTC Gene GeneID:514861|LOC514861:XM_002688809:232_cdna Constitutive 0 NULL GeneID:514861 7 GENE LOC514861 NULL similar to olfactory receptor, family 7, subfamily E, member 24 EMBV3_00788 TGTCTCCTATGGCAAAATTATCTCCAACATTCTGAAACTGCGATCTGCCAGGGGGAGGGC Gene GeneID:787522|LOC787522:XM_002693623:156_cdna Constitutive 0 NULL GeneID:787522 15 GENE LOC787522 NULL similar to olfactory receptor 1123 EMBV3_42546 CCACAATCACAATCGCCGGTTGGCTGCTGAACAGTTCAAGAAAACAAGTCTCCATGTGGC Gene GeneID:522905|AKAP8:NM_001102072:74_cdna UTR3_Alt 2 NULL GeneID:522905 7 GENE AKAP8 MGC165917 A kinase (PRKA) anchor protein 8 EMBV3_37921 TGAGGAGACACCAGGAGAACGTCCACACCGATTCATGAAATATTTGATTGTCAAGAATGT Variant GeneID:537500|PRDM5:XM_002688026:8_cdna 866^945 2 EMBV3_25178 GeneID:537500 6 GENE PRDM5 NULL PR domain containing 5 EMBV3_25425 CTGCAGGTCTTCAAGGAGCACACTCAGGAGTGGGATCCAACTGTTGGAAAGTCTCTGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32332 ATCCTATATAATAGATTGATCAGGCACCGCATCCACAGACGGTTGGAAAACCACGCCATG Gene GeneID:506564|EIF6:XM_002698538:29_cdna Constitutive 0 NULL GeneID:506564 26 GENE EIF6 EIF3S10 EIF6 eukaryotic translation initiation factor 6 EMBV3_42218 GACAGCAACCACAACTATGCAAGCCATCTCGAACTTCCGCAAACACCTGCGCATGGTCGG Variant GeneID:615854|NELF:XM_002691691:18_cdna 899^967 2 EMBV3_30417 GeneID:615854 11 GENE NELF NULL nasal embryonic LHRH factor EMBV3_36020 CTTGAGGAGAGGGACAGGAAGGCTCTGCTAAGCTCAACTGTGAATGTGTGAAGGTTCCAG Gene GeneID:781854|FBXO10:NM_001144076:19_cdna Constitutive 0 NULL GeneID:781854 8 GENE FBXO10 NULL F-box protein 10 EMBV3_08376 ACCACACAGTCACGCCATGTGGTACTCCAGCTGTCCGGTTTTTCAGTTTAGAACAGACTT Gene BVT0102_430845 + 1 EMBV3_39850 GK000009.2:13235994-13276981 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23857 ACGGACTGTCCATTGACGTTCCCAGTGTGGTAGCAGAAAACAAAATGGTGTCTTAAGTGC Gene BVV0102_148980 + 0 NULL GK000008.2:55992438-56028969 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225418 TCONS_00225409 TCONS_00225411 TCONS_00225414 TCONS_00225410 TCONS_00225420 TCONS_00225419 TCONS_00225417 TCONS_00225412 TCONS_00225416 TCONS_00225408 TCONS_00225415 1 XLOC_137738 Coding TCONS_00225420 XLOC_137738 Coding Coding TLE4 8:55922187-55993693 j TSS168771 3575 1 TCONS_00225420_5 410 14 0.950199286763163 1.49217002681217e-05 4.31727402490867e-33 6.13940160232676e-06 3.29404272774378e-31 2.22190413848553e-05 1.13801472352885e-66 6.54962276796188e-05 1.1736315290276e-31 4.47404054263496e-06 5.07699783525785e-39 1.32005752634409e-05 8.46939229563594e-17 9.42566677975844e-81 6.44266994336016e-51 9.48152018408342e-21 3.19136002620311e-05 0.00233773927597188 1.24254320195714e-05 9.53772987752425e-68 3.27825733337442e-06 4.28601341623286e-06 2.10551207063479e-86 3.38669320553653e-92 1.65036743527342e-21 4.96741882875402e-35 2.79647480288542e-05 3.88674652537345e-110 2.63465899380443e-66 0.000184375855280951 2.69539876859806e-79 XM_005210075.1 TLE4 PREDICTED: Bos taurus transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (TLE4), transcript variant X1, mRNA. 0.0 5961 100.00 0.924195804195804 NR_104239.1 TLE4 Homo sapiens transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (TLE4), transcript variant 6, non-coding RNA. 0.0 4567 90.69 0.924475524475525 TCONS_00225420_5 sp|Q04727|TLE4_HUMAN TLE4_HUMAN Transducin-like enhancer protein 4; 0.0 864 99.76 0.997560975609756 1 coding 0 0 0 0 -0.0369462760162756 0.772276081831957 -0.0169842970966752 0.80334278965114 CATCGATCGTCCTCATCCTCCCATAAGTGGTTCCTGGTTAAGAGGGGCTTTTTATGATTGTCTGCTGTGTGACTGGAGATGGTTTTTATCAGCCGGAGCATGCCAGTTGCCTGCAGCTGGAGTCAGGCTTGTATGAAATAATTTATTCATGCAGGATAATGCTCCTTAACATTTAACAGACTTGTACCTGACGTTTTTCAACAAGGATGGAGAATGTAAATATGAACCTAAAAGAGAAAGCACTGTAGGAACCCAAGGATCATTTTATTTGAGCTCTTCGGTATCCCCATCAGCCAGTTTCCGAGGTGCTGAGAAGCACAGAAACTCCACAGACTATTCCTCTGATAGCAAAAAGCAGAAAACTGAAGAAAAGGAGATTGCAGCTCGTTATGACAGCGATGCTGAGAAGAGTGATGACAACTTGGTGGTTGACGTTTCCAATGAGGATCCATCATCACCTCGAGGGAGCCCAGCACATTCCCCGAGAGAGAACGGCCTGGACAAGACACGCCTGCTCAAGAAAGATGCCCCAATCAGTCCAGCTTCGATTGCATCCTCCAGCAGTACTCCTTCCTCCAAATCCAAAGAACTTAGCCTTAACGAAAAATCTACTACTCCTGTGTCGAAGTCCAATACCCCTACTCCACGAACTGATGCACCCACCCCAGGCAGTAATTCCACTCCCGGATTGAGGCCGGTTCCCGGAAAACCGCCAGGAGTCGACCCGTTGGCTTCAAGCCTAAGGACTCCCATGGCAGTACCTTGTCCATACCCAACCCCGTTTGGGATTGTGCCACACGCGGGGATGAATGGGGAGCTGACCAGCCCCGGAGCTGCCTACGCAGGGCTACATAACATCTCCCCACAGATGAGCGCGGCTGCTGCTGCTGCCGCCGCGGCTGCTGCCTACGGGAGATCACCAGTGGTTGGATTTGATCCACACCATCACATGCGTGTGCCAGCGATACCTCCAAACCTGACAGGCATTCCAGGAGGAAAGCCGGCATACTCCTTCCACGTTACCGCAGATGGTCAGATGCAGCCTGTCCCCTTCCCCCCGGACGCCCTTATCGGCCCCGGCATTCCTCGACACGCTCGCCAGATCAACACCCTAAACCATGGGGAGGTGGTGTGTGCGGTGACCATCAGCAACCCCACGCGACACGTGTACACGGGTGGGAAGGGCTGCGTCAAGGTCTGGGACATCAGCCACCCTGGCAACAAGAGCCCCGTCTCTCAGCTCGACTGTCTGAACAGGGATAACTACATCCGTTCCTGCCGATTGCTCCCTGATGGTCGTACCCTAATTGTGGGAGGGGAAGCCAGTACGCTGTCCATCTGGGACCTGGCAGCTCCCACCCCGCGCATCAAGGCAGAGCTGACGTCCTCAGCCCCCGCCTGCTACGCCCTGGCCATCAGCCCGGACTCCAAGGTCTGCTTCTCGTGCTGCAGTGACGGCAACATTGCTGTGTGGGACCTGCACAACCAGACGCTGGTGAGGCAATTCCAGGGCCACACGGACGGGGCCAGCTGTATTGACATCTCTAATGATGGCACCAAGCTCTGGACGGGTGGCTTGGACAACACGGTCCGGTCCTGGGACCTTCGTGAGGGGCGGCAGCTGCAGCAGCACGACTTCACCTCCCAGATCTTTTCTCTGGGCTACTGCCCGACCGGAGAGTGGCTGGCTGTGGGGATGGAAAACAGCAACGTGGAGGTGTTGCATGTCACCAAGCCCGACAAGTACCAGCTCCACCTGCACGAGAGCTGCGTGCTGTCGCTCAAGTTTGCCCACTGTGGCAAATGGTTTGTCAGCACGGGAAAGGACAACCTTCTGAATGCCTGGAGAACACCTTATGGGGCCAGTATATTCCAGTCCAAAGAATCCTCATCGGTGCTCAGCTGTGACATTTCTGTGGATGACAAATACATTGTCACTGGCTCTGGGGATAAGAAGGCCACAGTTTATGAAGTTATTTATTAAGGACAAATCTTCATGTGAAATGGACTCCTTCTCCTTGTAGCACTTTTTTCTCTCATCCTTCTGTTCCCCCGCATCCAAAACCAAGGATTTCCTATTACTCATTGCAGTTGTGGAATCAGCCCCTCCTCCCCCACTTCCTCCCTGCTATTGAATTGTGAATACTCATTAAGAACCTGTGATATCAAAATCTTCAGCTATCTACTTGGAAGATCATGGATAACCCTACTTAACAGTGAAAGGAATCTTTAATTATGTATTATATCTGTAATATATTTATTTTGTTTAAAGAAGGCTTTCTAACAATGACTGACTAAATAAAGCTGTCTGTTCCTGCATTGGTAATGAAGATGCGTTGTACTTGATACCCATCCCCCCCTTTTTTTGGCAAAGGAGGGGAAAGGAAGGTTTAAAATAACTGATTAAAAATGTCACTAAATGTAGACTAATGACTGTATAGAGATGTGAAATGTATAATTACATATGGAAGCAATATGTTGCTGTGTTGTTAGATTTTTTTGTTTTTGTTTTTACATATTTTAAAAGATGTTTGGAAATTTAAACCATTAGAATGTGACAGACCACATCATATTCATTTGAGTCTATTCAGACAACTTTAACAAATATATCTATAGCTTTAGATTATATTCGATAAAAGTACTTGGACTTTTTCTTTTTTTTTTCTCTTTTTTTGACTTGTTGACAAGTGTCTTTGTAATATGTTTTTAATTCCTTTTTTATTGTATTATAGACAGATGAACAAATTAAATTTGGCCTCAAAGGGAGAACTTAATCCCTTCTTGATATTTTTGCCACATTTCTTTGCAAAGGGAGATGTATGCCTTTGGGCAGTTTTGTCTACGATAAATTAGGGGCTATTTTTTGGCATGTTCTTTGGGAATGGCGCAGATCCAGGGGAGGAGTCCTCCCACTGTGCAGGTCACGTCTTTTACAAGACAAGGACAGCAGAGGAGGATTTGCAAGGGCCTCCCTCTGAAAGCCAGGAAGAATGGACTCTCACCTGGGATGAGGACTTGCTTTCTTTACCTCCAGTTCTTTCCATGTCTTAGTTGGATGTCCCTGAAATGGACACAGACTGTGCCATTGTGCCGGAAACATTGTTGTTATCTTTTATGTTGTTGTTGTTGTGTTAAACTATGATATGTGACTTCTTTTTTTAATTATTATTATTTTGTTCGAATGCTTTAAAAAAATCTTTTAAGTCTGTGGATCTGCTGATGTACAGTGCCTTTGCTGCTATGGATCAAAATCAAGAGAACTGTGTAGATAAACTTTATTGTATAAGTAGAAAATTACTTAATTTCATACTAGAAATGGATGGATGCTGCAAGTTGAAACGGACTGTCCATTGACGTTCCTAGTGTGGTAGCAGAAAACAAAATGGTGTCTTAAGTGCTTAGTGTTTGATGTCATTAACAGTTTCGTAAAACTCTACAGTGTAGAAAGATTTTGATACTAAACTGTGCATTGTACATAGTTCTAATGCATTGTATTGACCACCAGTACTTCTATAATGGTAGATTGTTTGTGCATTCAGACTTTTAAGCATTAAACATAAATAACTTCTAGTATG EMBV3_42383 AGACCATGGATGTTAGTAAGCTGTCTGCTGAAAAAGTGGAAATTGCCACACTAACAAGAG Gene GeneID:510423|PSMA4:NM_001034381:55_cdna Constitutive 0 NULL GeneID:510423 21 GENE PSMA4 MGC126903 proteasome (prosome, macropain) subunit, alpha type, 4 EMBV3_28701 TGCATCACCAGGTCCTTTTACCGGAATGTGGTGGGTGTCCTGCTGGTCTTTGATGTGACA Gene GeneID:514286|RAB42:XM_002685683:327_cdna Constitutive 0 NULL GeneID:514286 2 GENE RAB42 RAB42P similar to RAB42, member RAS homolog family EMBV3_27819 CCAATGCCCCGCAGGCCAACAGCGACTCCATGGTGATGTACATCCAGAAGAGAAAACGGG Variant GeneID:100126544|LOC100126544:NM_001110447:33_cdna 151^210 1 EMBV3_06328 GeneID:100126544 23 GENE LOC100126544 MGC140329 hypothetical LOC100126544 EMBV3_11402 GAAGCGACTTTACATCATGACACTAGGCTGTCTGGCACCATACCGAAGGCTAGGAATTGG Gene GeneID:517211|NAA50:NM_001075750:83_cdna UTR3_Alt 2 NULL GeneID:517211 1 GENE NAA50 MGC140022 NAT13 N(alpha)-acetyltransferase 50, NatE catalytic subunit EMBV3_05791 ACTTTCCCTCTTCTTCCTTCTCTGGAGCTACCCGGTTTTGCACCTCCTGTTTCCTTCCCT Gene BVT0102_181581 - 0 NULL GK000019.2:25135096-25140753 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095937 TCONS_00095936 TCONS_00095938 1 XLOC_057839 Coding TCONS_00095936 XLOC_057839 Coding Coding P2RX1 19:25138451-25150511 j TSS71405 3445 1 TCONS_00095936_3 373 0.130914368650218 12 0.715316361223982 0.00543475418250443 0.00575615691173119 0.00149482369213557 0.00239054377855409 0.00201848567247812 0.000885425769651592 0.0017643438304387 0.00117490466285637 0.00427508138378888 0.000290919104791923 1.30525848686263e-05 5.68763618746175e-05 0.000677004883030391 0.000296064822499711 0.00012370888378641 0 0 0 0.00342262085331374 0.00411554478807056 0.00108676721644137 4.23089346477688e-06 7.94320247803408e-09 0 0.00559298967138203 0.00494343941260032 0.0045847762202426 7.83861236867977e-09 9.91985221114241e-06 6.18753417523734e-05 XM_005220225.1 P2RX1 PREDICTED: Bos taurus purinergic receptor P2X, ligand-gated ion channel, 1 (P2RX1), transcript variant X1, mRNA. 0.0 5882 98.48 0.961973875181422 NM_002558.3 P2RX1 Homo sapiens purinergic receptor P2X, ligand-gated ion channel, 1 (P2RX1), mRNA. 0.0 1301 75.83 0.458345428156749 TCONS_00095936_3 sp|P51575|P2RX1_HUMAN P2RX1_HUMAN P2X purinoceptor 1; 0.0 603 85.55 0.898123324396783 1 coding 0 0 0 0 -0.301308279185275 0.513724066500627 -0.301308279185275 0.513724066500627 GTGGAGGGTGAGGAGGAAAGAATGGGAAAGAGAATTTCTGGAAGAGGAGGGGCTTCTGAAGATGCTGGTGTCTTTGGCATCAGGCCCCCTCGGTGGCCTTCCTGGGGTGGTGACTACGAGACCCAGTCCAGGTGGGTGTTTGTCTACGAGAAGGGCTACCAGACCTCGGGCAGCCTCATCAGCAGTGTGTCTGTTAAACTCAAAGGTCTGGCTGTGACACAGCTCCCAAGCCTGGGCCCCCAGGTCTGGGATGTGGCCGACTACGTCTTCCCAGTGCAGGGGGACAGTTCCTTCGTAGTCATGACCAATTTTATCGCCACCCCCCGGCAGGCTCAAGGTCACTGTGCAGAGAACCCGGAAGGGGGCACGTGCACAAATAATAGCGGCTGCACCCCGGGAAAGGCAGAGAGAAAGGCCCAAGGCATCCGCACGGGCAAGTGTGTGGCCTTCAACGACACGGTGCAGACATGCGAGATCTTCGGCTGGTGCCCCGTGGAGGTGGACGACAACATCCCGTGCATCAGCTTTCCACGCTTCAAGGTCACCAGGCGCAACCTGGTGGAGGAGGTGGATGCCCGCTACATGAAGACCTGCCTCTTTCACAAGACCCTGCACCCTCTGTGTCCAGTCTTCAAGCTCGGCTACGTGGTACAGGAGTCAGGCCAGAATTTCAGCACCTTGGCCGAGAAGGGCGGGGTGGTGGGCATCACCATCGACTGGCACTGTGACCTGGACTGGCACGTGCGGCACTGCAAACCCATCTACGAGTTCCACGGGCTGTACGAGGAGAAAAAACTGTCTCAAGGCTTCAACTTCAGATTTGCCAGGCACTTTGTGGAGAATGGGACCAACTACCGGCACCTCTTCAAGGTGTTTGGGATTCGCTTTGACATCCTGGTGGACGGCAAGGCTGGGAAGTTTGACATCATTCCCACAATGACCACCATTGGCTCTGGGATTGGCATCTTCGGGGTGGCCACGGTTCTCTGTGACCTCCTTCTGCTCCACATCCTGCCCAAGAGGCACTATTACAAGCAGAAGAAGTTCAAGTACGCGGAAGACATGGGCCCAGGGGCGGGACAGCATGACCCTGCGGCCACCGGCTCCACCCTGGTTCTGCAGGAGAACATGAAGACATCCTGACCTCCATCCCCGGCTCCTACTGGATGCAGCAGGAGGGGAGCCCTGCTCCCTGGGGAGCTGGTGGGGTCCCAGCCAGCGCAGAGGGGTCCCTCCACCAGGGTGGAAGGATCTCCCCAGGAGCTCTCCCACCCTCTCAGCCAGGCAGACACCAAGTTGCCGGAAGCTCACAATTCTGGGCTCCAGCTCCGACTCCGCAACCCTCCCAAGGAAGCCTTCCCCAGCCTCAGCCACTCCTGGCCCCAAGCTTTGTGCCTGTCCCTCTGGGCCCTCATCCATCCATCCTGCTCCCTCGTGTCTCCAGACCTCTGCTCTCCCTAATGGCAGCCACTAGCTGCTGGTGATCTTTTAAATTTAAATTAATTAGGATTGAATAAAATTAAAACTTCAGATCCTCCAACTAGCCACATTACAACTGGTAAAGACACATGTGGCTAGCAGTTGCCCTACTGAACCACAAGAGATGTTTGCAGCATCACAGAGAGTTCTGTTGGATGGCTAACCTTGAATCCTGTTCCCTACTGGCCCCAGATCTCCCTGGGATGTTTGTCAACAGTGCTGGCACTTGGGAATTCCCTGGTGTTCCTGTGGTTAGGATTTTTACCACCAATGGCCAGGGCACGATTCCCTGGTTAGGGAGCTAGGATCCCACAAGCTGCCAGGCCAAAAACAAACAAAGAAATGCAAAAACAGTGCCGGACCCGGGCACACCCCAGATCTCCCAAACCAGAATGGCCAGGGCTGGTCACATGGTCTCCAAAGATAGCATAACCCTTCAGGACCTAAATTTTAGAACTGTTCCTGATGGGGTATCAGACTTCATTGCAGCCAGCATCACCCAGCAGGTGCAGGCCTTGAGCAGGTGTGTAATGTGCTCACAAGCCACACAGTGTCTCATGCACACATACACACGTGCACTCACCCACATGCACAACCTCCTCCCATCCACACTGTGTGTTTGAACAGCTTGGGCCCTGCAAACACAACCATCTGAACACACCTACACCCCCAGGCACAGACTCATGGTCCACGCCTTGTCGCCTCCATGGGGATGTGTTATCTTGAAGTGTGTGAGGCCAGGACGGCCCTTCTTAGTGATGGATCCTTACTCAGCTACCTCTGGTCAGGGTGGGAACCTCAGCCAAATCCTGGGCTCTCTGCCTGTGACCCAGCCCCGGCTCCTGAGGCCTGCCCAGCTCTGTTAACACAAGGTCTGAGAAATCAAGGGGTAGAGGATAATAAAAGGAATGGTGAATGAGTTCAAACCTCTGCCTTCTGCCTTTTCTTTCCCACCTTCTCTGAAACTCAGCATCCCAGCTGTGAAACTCAGGGCTGAGCTGAGTGACCGTTGAGGTCCTCCTGGATCTCTCCGTGGAGGTGGTGAGCTGACCCTTAAGCCCTGAGCCCCGCAGAGGCAGTACTGGGGATTGGTTCACCTTTATCCATGGGCCACTGTCCTGGCACAGCGCCTGAACATCGGCGCTTTTCCCAGTCTTCCACATGCCCCTCCCCTGGTTTTGAAAGGCCTAGCACTGGGACAATTAGAGACCCCAGGCATGGCCTCATGAAAGCTGGGCTGGGGAAGGGGCTGGCTGTCCTAGGAGAGAGTTGTGCTGGAGTCCCAAAGAGGAGAGGCAGGTCTTGAATGGAGACAGTGTGGGAGGGGTCTCCAGGGACCCTGCTGTGGGCATGACCCTCCGGCCACATGGGGTCTCTGGGCACCCCCATCACCATGCTCTGTCTAGAGCAGCATTGTCCGACACCAGTGACAGAACGTTCTCTATCTGTGCTGCCCAATGTAGTATTCACGTGTGGCCATTAAGTATTTAAAATGTGGCTCACGCAACCAAGGAACTGGATGTTTAATTGCATTTGTGTTAATTTAAATCGCCACATGTGGCTACTGGCTACCATATTGGATGGCATAGGCTAGCCCCACCCCTTGCCCCCAGGCCCTTGGCCTTCTGCCCTCTTCCCTAGCCAAGAGCTGTGTCTCGGATTTTACAAAACAGGAACTTTCCCTCTTCTTCCTTCTCTGGAGCTACCCGGTTTTGCACCTCCTGTTTCCTTCCCTCCTGAGCAAGCAGAGGATTCCTTCTTGATTTCCAAACCTCACCCAGCCTGGAGACCTCCCACCAGAGGCTGTCTCTCCTCTCCCACTCCTGCGTTTGCTCCCCTCTTCCACCTCCTTCTCACCCTGCTTCTCCACCCTGCTACCTTCTTGCCCTTCTGTTTCCCTGCTACTCGGCCTGCCCTCCCTTCACTGCCAACACCATTCTGGAAAGACCAGTCTACACGTATTCCC EMBV3_17045 TGCCACCCGCCCCAAGGCTTTTGCCTAGTTCCCCAGTATTCTCGCTGGGGATTGAATAAA Gene GeneID:510967|CTSW:NM_001110070:580_cdna Constitutive 0 NULL GeneID:510967 29 GENE CTSW MGC137843 cathepsin W EMBV3_33188 GCAGTTTTCTGTACCCTTGAGGAGTGGGAAAGAACTGGAAATGAGGGTCGTGTTACCCAG Gene GeneID:538956|SLAIN1:XM_002691900:16_cdna Constitutive 0 NULL GeneID:538956 12 GENE SLAIN1 NULL SLAIN motif family, member 1 EMBV3_22400 GCGAGTCCCCAAAGAAGAGGAGGAGATGGACCCGAAGCGAATAAAGAAGGACCTCACCAA Gene GeneID:616267|LOC616267:XM_002686977:799_cdna Constitutive 0 NULL GeneID:616267 4 GENE LOC616267 NULL similar to RIKEN cDNA 4931409K22 EMBV3_19258 CTTGAGGACATGGAGTCTTTCTTAAGGACATGGAACTCTTCTGGGGACCTGGCAACTTCC Gene GeneID:100125302|TMEM8B:NM_001103335:2_cdna Constitutive 0 NULL GeneID:100125302 8 GENE TMEM8B MGC166240 transmembrane protein 8B EMBV3_11111 GGAATGGGTGACGGTTTAGGTGCTGAAGATGAGGGAAAGGGCAGAAGTTAAGAAACGGCA Gene BVT0102_055494 + 0 NULL GK000021.2:63343903-65841341 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125192 1 XLOC_076734 NonCoding TCONS_00125192 XLOC_076734 NonCoding NonCoding - 21:63688815-63691946 - TSS93951 3131 7 TCONS_00125192_10 67 0.294793995528585 1 0 0.00111678734046038 0.000742961198311176 0.00078027985859358 0.000697538121876511 0.000649670737374354 0.000503826436968533 0.000516863098276634 0.000433545052314365 0.000277200589411895 1.31411793148692e-06 0 0 9.16411792540415e-07 0 4.70092524538374e-06 0 0 0 0.00114629626107621 0.00230374851373475 0.000140587614496779 0 0 0 0.00118277581052687 0.00104410609312391 0.00139445697337052 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 1e-62 246 86.41 0.0654742893644203 0 noncoding 0 0 0 0 -0.626256965746132 0.00420152286501159 0.0423962641686401 0.513342143361228 GTTTCTGATTTTCAAGCGTGGGGGGCGAGTCTTATTTTGTTGTTTCTTTTAATTACGCCATGCACTGTGGTGTTCCACCCTCCAAGGAGATGTTGCCTCTGTTGGTGGGTGAGCTTGAAGGTGGGAACCAACCTGATGTGCATTCATAGCATCTGTGGTAACCCCTCTTCCCAGAGCTTCTGTCTGTCCTGGTCTGACTGTCAGCAAGCTGAGGCACAAAGGTCCCCCAGAGTGCTCAGCACCCAGTCGGCAGTTCCATCTCCCCAGAGATTAGAGGTTTATTGACTGACTGACTGAGGCAACAGAAGAACCCACAGAGTGATGGAAGGTCAGTGGCACATCTTATCCACTGCTTCCCTCAACTCCTGACATAACCTGCACACATGGGCACAGTGGTATCTGCTCAGTTGCCTGTCCAATAGGATGTGCTACAAGCTCTAGGAATTAAAAATTGACTCTAGGCAAATGGAAGACGGAGGGTGGGAGATGTTCTTCAGAAGCATTTTCCTACAGCATGTTATCAGCTGGCCCTCATTGGGGGGATCATGACCTATGACCCAGAAGCTCCAGGTCACAGTCAGTGGCAGGAAAAAGAAATGCATCCACTTCATGATATTTCAAAATAGCGTGATTGGGGGGGAAGAGTGCCTATGCTGAGCTTTCATTTCATGTTATACCCTCGAGTTTTAAAAATGATTTTGATATTAAAAAAATCCAGCTACAGAACATTTTTATATTTTTTGGAAACAGTTGTGGATGACTTTGCTTACTGTTGTGAAGAGTTGAGTTAAATGCATCCTGAGATATTTTCAAGGTCATGTCTGTTCTTCCAGTTAACTTGTAGGCTTATTGGTGAGTCCATGGGCATAAGTAGTATGGTGGCTTTCCTTTATCACCTTGGCCGGTAGGGAGCTCACAGTTACATGTTGTCATTTATGAAAGGAGCTTCCTGGCATAGTAGTTTTTCTTAAAGGCAGAATCTTTATCGTCTCTTAACTTTTGTCCTAGTTCATGTGTTTACTTTTCTTACAAACAGCTTCAAATCCTTTTGAAAGTTAAATATATATATTTTTATATTTAGAAGTAAATGTTAACTATATATAATATATGGGTACATGCATATTTATACAGCTATTACATACACATACATACATGTATATATATAAATATATAATCTATATTTATATCTATATCCACGAACACACACAGATCATTCATAAATCTACTCAACAACATTTATTGAGCATCTGCTAGTTGCCAGGTACTATTTGGTGCATTGACGGATCTGACCATGACAAGATAGCTTCCTTCTTTCACCCAGCTCACCTTTTAAAGGGGCTGGACTATAGTGATGATGACATAATAGGCTAATATGCTTTTGGAACAGGACAGAGGGAAGGACTCTGGGATTTGCCGTTTCTTAACTTCTGCCCTTTCCCTCATCTTCAGCACCTAAACCGTCACCCATTCCTGTCGTTTTGGCCCCCCTTTTCCCATCCATGGCCATCCTCATTAAGTTGCACCTTAATTGCTCCAGAAGCTTCTCATGTGACATCTCTTCCTCCATTCTTCTTTTGTACTTGTCTGATGAGTTTTTTCTAAAACTGCATTTTTATCTCTGAGGCTTCCTCCTGTGGACCTCCTGCTGTGGTAATAATAGTAGCAGTTGATCAGAGGCAGTGCTTACTCTGAGCTCCTAGCTCTGCGTGTATTATCTTATTTAAACCCTACACAATCTATGAGGTCATGGGGGTTATTAGTCCCATGTCACGAGGGAGGAGATTGGGGCTCAGAAAGCTGAAACCACTTGCCTAAGACCTCACAGATGCTCTGGGGCAGCTCCAGCTTCGAGCCTGTGGTCTGAATTCTCCTGATACTTGTTCTCTTGCTGCTGCTGTCCCAGCCTTGAAGGTAGAACTCTGATGCTTAATATCAACCCTGACTCTGAGCTCATTCCTGTACTTTGCTATTTTCCTCAAAGAAAATGGTCTCACCTGTCTTCTCTTTTTAAGGAATCCTTCCAGTGGCCCCAGGCAGATCTTCTTGGGGCTGGTAGACCGAGCCATGACTGAGGCTGCCAACATGGCAGCATTACTGGGAGCCCCAGGTTACTGATGACCCATCTTCACCTGGAATTCTGCATTTCCATTCTGGGTTCTAGATTTCTGCAGGGGTGTCCTGGAGTAGGTTCAGAGGAGTAGATCATGAGGCAAACAATATTCGCTGATGAAGTGGAGAAGAAGTTTCAAGTGTTCAACAAGAGACGTGTGCTTCCCCAGGCTGCTTTGGGGCTTGAGAATCCACAGCTCAGACACGAAGACTTGGCTTGTGTTTATGTTCATGCATGAATGCTCAGTCGCTTCAGTCATGTCTGACTCTTTGTGACCCTATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGTAAGATTACTGGAGTGGGTTGCCATGCCCTCCTCCAGGAGATATTTCCGACCCAGGCATCGAACCTGGGTCTCCTGCAGCTCCTGCACGGGCAGGCATATTCTTTACCACTAAACCGTTGGGGAAGCTCTGCGTTTATGTTCCCGCCTCCCCAAATTCTCATTTCCACAGCATTCCATGAGAAGCAGCACAGACAGGTGGCTCTTATCAGTTAGACGCCTTTTGGTTGCAAGCAACAGAAACCATCCTGAGCCAATATAACTACACAGGACACTTTCCTCTTTTCATTTGGCTTGCAGTTTTCTTGAACATGACAGCAGGAGCTAATGTTGTCTTCTTCCTCCAGCTTTGAGCTTCTCATCCATTACCCAGCAAGGACTCACTGCTTGATGCCCACAGAAGCCAATACGATGGCACTAGCCTCAGAGAGAAAAAAAAAAGAGCTTTATTGTGAGGTCAACTGGCAAAGCGACAGTAGGCAGAGCTCAAATCTGTCTCTTTGATCCTGGAATCTAAGCCAAATTTAAGTGGTTAGGAGAATAAGCTGATTGGCTCATCTCAGAATCAGTCTGTAAATGATAATCAGCTGCTGGAAGCCAGATTTTCCTTACTGAAGTACTCCTCACTTTCTGGAGAGCTTCTGTGACAACACTTCTATTCTTTGAGCTCCTTAGACTGAAGATTCTTGGTTCTGAGG TCONS_00119984 . 3' 302427 TCONS_00119984 . 3' 305557 EMBV3_21114 GGAGTCCCAGTCACAGAACAGCGGCAGGAGTCTTTTGAAGATTTCATTGCTAGAGCATGT Gene GeneID:537926|CEP78:XM_002689658:59_cdna Constitutive 0 NULL GeneID:537926 8 GENE CEP78 NULL centrosomal protein 78kDa EMBV3_35061 CCAAAGAAATTTCAAAATACGGTCAATTGGGAACTGAAGTCAAAGCAATAACGTACTCAG Variant GeneID:613795|ZBTB8OS:NM_001076288:172_cdna 816^957 3 EMBV3_38386 GeneID:613795 2 GENE ZBTB8OS NULL zinc finger and BTB domain containing 8 opposite strand EMBV3_38551 AAGTGCCACCTCAGCAGACATAGGAGGAATGTGTGCCCACCACAGACCACTGTTTCAGTC Gene GeneID:616189|ZNF133:NM_001110090:76_cdna Constitutive 0 NULL GeneID:616189 13 GENE ZNF133 MGC139200 zinc finger protein 133 EMBV3_18657 TAATACTTTATTTTTCTTATTATACCACTTTGAATTTTTCTACAAGGGCAGTTGAAGTCC Gene GeneID:540412|SOCS4:NM_001076218:110_cdna Constitutive 0 NULL GeneID:540412 10 GENE SOCS4 MGC142549 SOCS6 suppressor of cytokine signaling 4 EMBV3_09144 GAATATCACTGCAAGCATCCCCCAAAATTCTGTTCTCCTCTGTGGGCACATGCATCTTAC Gene BVV0101_018175 + 0 NULL GK000019.2:5747139-5818423 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092066 TCONS_00092064 TCONS_00092065 1 XLOC_056801 Coding TCONS_00092064 XLOC_056801 Coding Coding HLF 19:5696490-5751173 = TSS69388 5262 1 TCONS_00092064_3 295 0.0210946408209806 4 0.903844043743828 0.0043093285021091 0.0029923890237877 0.00381858437912987 0.00415835760552202 0.00393618695330102 0.000316278004688839 0.00160867609635417 0.00243123530838198 0.00433829119238245 0.000476131163397837 0.000393993411957117 0.00022279470051069 0.000241774123654743 0.00324530568026992 0.000640886357474996 2.48488776732029e-08 1.60056481864197e-08 2.35867238769845e-08 0.000881927822961007 0.000956623511313563 0.000175178507932823 7.32036501072525e-09 8.07049029918047e-06 1.21350714736918e-07 0.00049148173849796 0.00160416304669401 0.00122195409913621 3.82461953569925e-05 9.28546910036146e-05 0.00012905725459735 NM_001192437.1 HLF Bos taurus hepatic leukemia factor (HLF), mRNA. 0.0 2214 100.00 0.232991258076777 NM_002126.4 HLF Homo sapiens hepatic leukemia factor (HLF), mRNA. 0.0 4394 80.70 0.897947548460661 TCONS_00092064_3 sp|Q8BW74|HLF_MOUSE HLF_MOUSE Hepatic leukemia factor; 0.0 572 95.59 0.996610169491525 1 coding 0 0 0 0 -0.0590442635624126 0.701539040284092 0.0134865470305325 0.776221493459827 CTTTTTCGCAATTTTGAGCGTTGTGCATGACGAGAGGTTCGAGGCACGTGAGAGCATCCCGCCCGCCGCGGAGGAGCCCGCGGGCACTCGGCGCGCTCCCCGGGGGTCGTCTGCGCTGGGAGCCCGAAAGTTCTTTGGGTTTTGTGTTTTTATGCAGATGTATTTAAAAAGACATAAGTAATTTTTTTTTTTCTTCTCTTGTCTCCACCGCCTTGAAAGCTAATACTTTTGGCAAAGGACGGAGGAAAAAGCTCAGCAACATTTTGGGGGGAGGTTGGAGTTTTTTGGTTTGTTTTTTTTTTTTTTTAATTTAAGAAAAAAAAAATTGAGTGCATCGCGATGGAGAAAATGTCCCGACCGCTTCCCCTGAACCCCACCTTTATCCCGCCTCCCTACGGCGTGCTCAGGTCCTTGCTGGAGAACCCGCTGAAGCTCCCCCTTCATCACGAAGACGCATATAGTAAGGATAAAGACAAGGAAAAGAAGCTGGATGATGAGAGTAATAGCCCGACGGTCCCCCAGTCAGCATTCTTGGGGCCCACCTTATGGGACAAAACCCTTCCCTATGACGGAGATACCTTCCAGTTGGAATACATGGACCTGGAGGAGTTTTTGTCGGAAAATGGCATTCCCCCCAGCCCGTCTCAGCATGACCACAGCCCCCACCCTCCGGGGCTGCAGCCGACCTCCTCAGCGGCCCCTTCCGTCATGGACCTCAGCAGTCGGGCCTCCGCACCCATTCACCCTGGCATCCCACCCCCAAACTGTGTGCAGAGCCCCATGCGACCAGGCCAGCTGCTGCCAGCCAACCGCAATACTCCGAGCCCCATTGACCCCGACACCATCCAGGTGCCGGTGGGCTACGAGCCGGACCCGGCCGACCTCGCCCTCTCCAGCATCCCCGGCCAGGAGATGTTTGACCCTCGCAAACGCAAGTTCTCCGAGGAAGAGCTGAAGCCACAACCCATGATTAAGAAAGCGCGCAAAGTCTTCATCCCGGACGACCTGAAGGACGACAAGTACTGGGCGCGGCGCCGGAAGAACAACATGGCGGCCAAGCGCTCGCGGGATGCGCGGCGCCTCAAGGAGAACCAGATCGCCATTCGTGCGTCCTTCCTGGAGAAGGAGAACTCGGCGCTGCGCCAGGAGGTGGCGGACCTGCGCAAGGAGCTGGGCAAGTGCAAGAACATCCTGGCTAAGTACGAGGCCCGGCATGGGCCCCTGTAGGTGGGCGGCGGGCGGCCGCGGCCCGGACAGGCCTTCACCGCAGCGACTGACCTTTCTGACATCAGCACTTTACCAGACGCAGCAACACGACGGACTCACGTTTTGGGGGGGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGCTCTTGTGTGGTCAGCGCGGTGTGTGTGTGTGTGTGTTTGTGCCCCTGTGTGGTCAGCGAGTATGTGTGCGCGCTTGTACATCCCTTTGCGCCCGCCATTTTGAAACGAAAGGTGCCATGTTTTTACTGGACTGAGGAGACCGCGCGGGTTTCCTGGTCCCCGCCCCCTCACCCCACTCCTTTCCTGTGGCTTCATGTGTGCTCCTGCCCACTCTTTCAGGACCTTCTCGGGTTCACTAAAAAGGGCCCTGCTGAAATAGTAGATCTCGGTTTTCAAGACCACAGGCTCTTGTTTCTGTTTAATCTGTAAGTTACCATGCTAATAAGGTGCACAGAGTAATTTAGCACTACACTGCAGCTCCATTCAGTTATAGGTTGCTTTCCTCTCTTCTTAAGTTTTGGTGATAATCGTCTTCAAATTCAAAGTGCTGTTTAGATTTACTAGATCCCATATTTACTTAACTGCTCTCTACTAAGTTTCCTTTTAACTCTACCAACTCCAGCGAGTAAGAGTACTCTTATAGAACACAGAGTGTGTTTTTGCACTGTCTGTACCTAAAGCAATAATCCTATTGTACGCTAGAGCATGCTGCCTGAGTATTACTAGTGGAAGTAGGATATTTTCCCTACCTGAGAATTTCACTGTCTTTTAAAAAGCAAAAATTACAGTAATGTATTTGAGCATGCCCAGAACATCCCCAGGACCGGGAAGCAGAGGGAAACGCCAGGTCTAAGAACAAGGGGTTAACTTATCAGTGTACAGCCAAAAAATGCATCTTGGAACAGCTTTTGACATTGATGTGTTTGCTTTTGTTTTCTCTCTTTTCCCATGCTCCCAACCCCAATTTTCTAGTTAACTTTTTCGACATCCCTCTTGATATTCAATACAATTCAATTACTTAAGATTCAGTTTTCCCCATTTTTTGGTAATGTATATATTTTTGTGAATTATACCTTGTTGTTTTAAAAAATCAGTTAAGTTAATAAGTTGATGTTTCGTAAAACCCCTTTTTCTTAGTGGTGTCATATTTGAATGCTTCATAAATTAATGATTCTGGAGCTTATGTTTCTTATTCTCTGTTTTCTTTTGAACGTATGTGCTCTTATTAAGTGGACTTCTGAAAAATGAATGTAAAAGACACTGGTGTATCTCCAAAGGGGATGGTGTTGTCACAAACTGTGGTTAATCCGATCAATTTAAGTGTTTACTGTAGACCAAAAGGAGAGATTATTAAATTGTTTAATGTTTATACAGAGTAATTATAGGAAGTTCTTTTTGTACAGTATTTTTCAGATATAAATACTGACGATGTATTTTGGAAGACATATATTATATATAGCAAAGAGAAAAGGAAAACTATTCCATGTTTTAAAATTATATAGCAAAGATATATATTCATCAATGTTGTACAGAGAAGTGCTTGGGGGTTTTTGAAGTCTTAAATATTTTAATTTTGTCACTGACACATCAGCATGTTTTCTGCTTTAAATTAAAATTTTACAACAGTATCGAAGCTTGCTGTGACGAATTCTGCTCTAAAATATCTAAGGAGTTTTCTTATTTCCTATTAGGTCTCAGAAAGAAAACCCAAAACCACAAAATGGATGTTAGTCAAATATTTATTGGATGATACAGTGATTTTTAGGAAAAGCATCTGCCACAGAAATGTTCACTTCAAAATTATGAGTTTCTAAAAATGAATATCACTGCAAGCATCCCCCAAAATTCTGTTCTCCTCTGTGGGCACATGCATCTTACACAGTATAAGGTTAATATCGGTGCTATGTGTATGATTTATAATTTGATCGCTGTCTTGACTTTAAAGGTGATTGTTCTTTTGTTTCACTAACTTGTGTTAAGAGATTTTGCTGTTGTTATAAAGAAACATTTTCTGCAAGATTAAAATACCCTTTTATCAGTGGGATTTTGTAGTTTCCTGTGTCCAGAGTATGTGATTCTTTAATGACCTTTATTGGTTCTTTAATGGTGATCTCCTTATCAATCTGTTAGCAATGCTTCTCTCTTACTGTTATAGTCTTGGGGAATCTGAATAGTGGAATATTCCTACAGATATCCCTTTTTATCTGAAGCTACAGGTTATGATGGGAGATGGACGCATATTGGAATTGAAATAACCTTGTTCGGGTAAATAACTAATAAAATAAACAAAACCTCTATCAAACTTAAGCAGAACTGAATTAATGGTATTCAGAGACACAAGTAAGCATGGAGTTGGCCTTTTTATAGGTAAAGAGACTAACTGCAGCAGAATTGTTAAATAGTTCAATGTCTAGCAAGAAAGCTGGAGAAGTATTGAAGGATTGTACTGAAGACAATCCAAATTCATTGAAGTTTAAAATGGTAACTGAAAAAACTGTATTTGAGTACTAGTCTTTCTGAAATTAGGTTGCTTGTATCTGATGAGCATCACAGATGTTTTCTGCAGAAGAAATTTAAAGATCATAATAAAACTTATTCTTTGGCGTGCCAGGGGAGGTTTCAGAAACCTACCTCGTTTTAAATTTTTTAAAGCTTTGGAGTCTGTACAGGTGCCTTATATGTAGGTCATTGTCACCACACACAAGCACTCAACCCCTGAACTCACTGCCTTCTGTCCAGGGCAGTCAGCTAGTAAATAAAGCAGTCCTGCTAAATGACATGAGAAGGCATGGCCCGATTTGGAATGACTTGGATCATCCAGGGTCAGATGAGTTCCGCAGACTGCAGCTATTAAAAGAGTCCTGTTGTCATTTTTCACCTTTTCATCATAAGCATCTTTCAGAGATTAATTACTTGGCCATTAAAAATGAATCCAAATCATATTATGCCAACATCATTTAGACATGATTTGGAATGAGCAGCCTAGGACTTCTTGACAAGGTCACATCCTCCTTTTGACTAGACTTGCAAAGAAAGGCAAAAATTGATCAGCCTATGGTTCTGCTTGTGACACCTGGAGGACATAGGTAGGGAATGGGAGGGCTGTAAGCAATCACGTCCTCCTCTTGAGAAAGTGGACGCTTTTGACCATTCCAAAACCCACAGTGAGCAGGATAGTGACAGGCCTTTCATCTTCACATATGACAGGCCGCTGTGAAACCATCGTTTGAAGCAGAAAGACCGTTTGCTTCATGAGCATGCAGATGGAATTCTAGCACTGGGTGGAGAGGAAGCAGTGCTAGAAAGCCCAGAGGTTCCTTCCAACTTACCGGTTTTGTGAGGAACTCAATTCTAAATATATGTTTGAAAGGTCTTGAGTCTGTTTGGAGAAGAGTCAATAAGAATTTTAAGTAGAGTCACTCCCACCCCCATCCCAAATTAAAACAAAGGTCATTCTGTAAAATGCAAAGGAGTTTGCCTCCCTTATTCCTAAAGTTCCTTTTAGGAAAACTTAATTCGTGTTAATCAGAGCAGTTCCAGAAGGTGATAGACACCTGCTCTCAGTCTGCCAGCTTCCTTCTAAGGGCTCCTAGGCCCCCACTGAGGAGGCTAAGATCTCCTCTAGGTTTTCTCTACAATTAATGCCATTTTTTAAATGAGCAAAGCCATGTTTTTAATCATGATGCATTGGATTTGGCAACTAAAGGCAGTACATTTTGCTGAGGGCTAAGTGTATGTAGAGGAGTGTATGTGTGTGTGTGTGTGTATGTGTGTGTGAGAGTAGTTAAGGCATAAAATCTTTCATGTGGAGCACCTTACCAAACGTAACAATAATCACCATTATCCTTTTGGCAACACCACAAAGATTGCATCTGTTAAACAGGTACAAGTTCACTTGATGTCAGTGTGTTTGTACACCATGGTTTTGGTTGCTGTTTATGCTGTTAAGTCCAAAACTTTGTCTGTTATTCTTAATGTTTAATAAAATTTGAATTGTTTCCTGTCT EMBV3_04063 CTTCTGGGTCACAAGTGCAACAGATACATAACCACCATGTAAGAGAGTGTGGGAGGGGCT Gene GeneID:506030|IL17F:XM_002697281:57_cdna Constitutive 0 NULL GeneID:506030 23 GENE IL17F NULL interleukin 17F EMBV3_13811 CCAACCCCTTCCTCATAAGATGTTCCTTATCTCAAATGAGCAGACCCTAATAGGCCAATA Gene GeneID:505628|SNF8:NM_001075211:59_cdna Constitutive 4 NULL GeneID:505628 19 GENE SNF8 MGC142498 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) EMBV3_23416 CCACGAATGCACGCTCTCATTGTCATGTAAGATTGTTGTCCGTTCCAGAGAGATGCTCTG Gene BVV0102_215500 + 0 NULL GK000010.2:54625060-54693718 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014048 TCONS_00014051 TCONS_00014032 TCONS_00014040 TCONS_00014049 TCONS_00014050 TCONS_00014042 TCONS_00014047 TCONS_00014038 1 XLOC_008236 Coding TCONS_00014042 XLOC_008236 Coding Coding NEDD4 10:54482901-54627481 = TSS10261 5665 1 TCONS_00014042_4 901 0.0527802294792586 29 0.96101785183187 3.35291929217772e-13 2.35514265829025e-33 3.16814286824647e-07 3.09023680929747e-08 7.12567720846422e-06 1.85304861172024e-19 1.85212996473904e-19 2.43683000152019e-06 1.08564276934121e-05 1.90549392802853e-05 5.17157148843564e-12 2.36435664014789e-14 3.91221539977335e-09 5.04254917877039e-07 9.79146329947697e-59 0.00202184532690792 0.000155577447981432 2.61487807593358e-09 1.70210165103718e-06 3.03643096313648e-15 3.80431478788318e-128 0.000127123620554874 0.000265085725463266 0.000889187424093184 2.30291909795371e-236 3.80339129498465e-08 1.99221026534624e-10 1.7766953517792e-07 4.70113233530842e-06 1.44458091672889e-09 XM_003582720.2 NEDD4 PREDICTED: Bos taurus neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase (NEDD4), transcript variant X2, mRNA. 0.0 1.022e+04 100.00 0.99982347749338 NM_006154.3 NEDD4 Homo sapiens neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase (NEDD4), transcript 0.0 6271 84.47 0.997352162400706 TCONS_00014042_4 sp|P46934|NEDD4_HUMAN NEDD4_HUMAN E3 ubiquitin-protein ligase NEDD4; 0.0 1615 95.77 0.891231964483907 3 coding 0 0 0 0 -0.0596977432854954 0.648607345677757 -0.0507201196670279 0.401110999359193 CTCCTCACTACAGTTCCCACTCTGGGTGGGGGCGAGCGCGTCCGGTTTGCAGGAACCTTTCGGAAATGGCAACTTGCGCGGTGGAGGTGTTCGGGCTCCCGGAGGACGAGGAAAATTCCCGAATTGTGAGGGTAAAAGTTATAGCTGGAATAGGCCTTGCCAAAAAGGATATCTTGGGAGCTAGTGATCCTTATGTGCGAGTGACGTTATATGACCCAATGAATGGAATTTTTACAAGTGTGCAAACAAAAACCATTAAAAAGACTTTGAATCCAAAATGGAATGAAGAAATATTATTCAGAGTTCATCCTCAGCAACACCGGCTTCTATTTGAAGTGTTTGATGAAAATCGATTGACAAGAGATGATTTCTTAGGTCAAGTGGATGTTCCTCTTTATCCATTACCGACAGAAAATCCAAGAATGGAGAGACCATATACATTTAAGGATTTTGTTCTTCATCCAAGAAGTCACAAATCAAGAGTTAAAGGTTATCTGAGATTAAAAATGACTTACTTACCTAAAACCAGTGGCTCAGAAGACGATAACACAGAACAGGCTGAGGAATTAGAGCCTGGCTGGGTAGTTTTGGACCAACCAGATGCTGCTTGCCATTTGCAGCAGCAACAGGAACCTTCTCCTCTACCTCCAGGATGGGAAGAGAGACAGGATATCCTTGGAAGGACCTACTATGTAAACCATGAATCTAGAAGAACACAGTGGAAAAGACCAACCCTTCAGGACAACCTAACAGATGCTGAGAATGGTAACATTCAACTGCAAGCCCAGCGTGCATTTACCACCAGGAGGCAGATATCTGAGGAAACAGAAAGTGTTGACAACCGAGAATCTTCTGAGAACTGGGAAATTATAAGAGAAGATGAAGCCACCATGTATGGCCATCAAGCCTTCCCTTCATCTCCACCATCAAATAACTTGGATGTCCAGACTCATCTTGCAGAAGAATTGAATGCCAGACTCACTGTTGGTGGAAATTCAGCCACTGGCCAGCCAGTATCCAACTCAAATCATTCCAGCAGAAGAGGCAGCTTACAAGCCTATACTTTTGAGGAACAGCCTACACTTCCTGTGCTTTTGCCTACTTCATCTGGATTACCACCAGGTTGGGAAGAAAAACAAGATGAAAGAGGAAGATCATACTATGTGGATCACAATTGCAGAACTACTACCTGGATAAAGCCCACTGTACAGGCCACAGTGGAGACCAGTCAGCTGCCGTCAAGCCAGGGTTCTTCTGCAGGCCCTCAGCCACAGGCCTCCGCGAGTGATGCAGCACAACAGGTGACCCAACCATCTGAAATGGAGCAAGGATTCCTTCCCAAAGGCTGGGAGGTCCGGCACGCACCAAACGGGAGGCCTTTCTTCATTGACCACAACACCAAAACCACCACCTGGGAAGATCCAAGACTGAAAATTCCAGCTCATCTGAGAGGAAAGACATCACTTGATTCTTCCAGTGATCTGGGGCCTTTACCTCCAGGATGGGAAGAAAGAACTCACACCGATGGAAGAATCTTTTACATAAATCACAATAGTAAAAAAACACAATGGGAAGACCCTCGTTTGCAGCATGTAGCAATAACTGGACCAGCAGTGCCCTACTCCAGGGATTACAAAAGAAAGTATGAGTTCTTCCGAAGAAAGTTGAAGAAGCAGAATGACATTCCAAACAAATTTGAAATGAAACTTCGCCGTGCAACTGTTCTTGAGGACTCTTACAGGAGGATTATGGGGGTGAAGAGAGCAGACTTCCTCAAGGCTAGACTGTGGATTGAGTTTGATGGTGAAAAGGGACTAGATTATGGAGGAGTTGCCAGAGAATGGTTCTTTCTGATTTCAAAGGAAATGTTTAACCCTTATTATGGGTTGTTTGAATATTCTGCTACGGATAATTATACCCTACAGATAAATCCCAATTCTGGACTGTGTAATGAAGATCACCTCTCTTACTTCAAGTTTATTGGTCGGGTAGCTGGGATGGCAGTGTATCATGGCAAACTGTTGGATGGTTTTTTCATCCGTCCATTTTATAAGATGATGCTGCACAAGCCAATAACACTTCATGATATGGAATCAGTGGATAGTGAGTATTACAATTCATTAAGATGGATTCTTGAAAATGATCCAACAGAATTGGACCTCAGGTTTGTCATAGATGAAGAACTTTTTGGACAGACACATCAACATGAGTTGAAAAGTGGTGGATCAGAAATAGTTGTCACCAATAAGAACAAAAAGGAATATATTTATCTTGTAATACAGTGGCGATTTGTAAACCGAATCCAGAAGCAAATGGCTGCTTTTAAAGAGGGGTTTTTTGAACTGATACCACAGGATCTCATCAAAATTTTTGATGAAAATGAACTAGAGCTTCTGATGTGTGGCTTGGGAGATGTGGATGTGAATGACTGGAGAGAACACACAAAGTACAAAAATGGCTACAGCATAAATCATCAAGTCATCCAGTGGTTTTGGAAGGCTGTTTTAATGATGGACTCAGAAAAAAGAATACGATTACTTCAGTTTGTCACTGGCACATCCCGTGTGCCTATGAATGGATTTGCTGAACTGTATGGCTCAAACGGACCACAGTCATTTACAGTTGAGCAGTGGGGCACACCTGAGAAGCTGCCAAGAGCTCATACCTGCTTTAATCGCCTGGACTTGCCACCCTATGAGTCATTTGAAGAATTATGGGATAAACTTCAGATGGCCATTGAGAACACTCAGGGTTTTGATGGCGTTGATTAGATTTTAAGTAATCATTTATGGTGTTTTACTGCCACTTTTTTTTAAAGCAAGATCTTGACTTAAAATTTTCCAAGGAACTACTAATCCTTGGCCATTGATGCTTCTCAGATATTGGAGAAAATCATGTCAACGAATTAGAAGAACTAGTATGACAACTTTTCCATTATTTCATTCATTTTAGTAATGTGTTGCATTTACATAGTGGTTTTGTTCTATTTTGAGTTCACACCCAAGGATTGAGTTCACACCCAAGTCCTGTGTGCCTGAAATCGTGAGTTTTGTCCTTGGATTTACCTCTTTTACAGTATTTGCCAGGCAGTTCTTTCTTAAACTACTGAAATGATAACTGTGAATACCTGTGATAAGTGTCATGTGTGAAAAGTGTGATTTTTTTGAGAAGGAGAACTGAAATTTGGGGAAAAAAACTTCAATACTGAGTACACGACAATATATTCAGTGCTGCCTGCAGCTAGTTATTATTTTTTAGACCTGCCTACTGCACATGCAGTAGCAGGTTTTTGGAAAAATATTGGAAAGTGTGTAACCTATATTTTCAGTCAACTGATTCACTTACAAAAAGCTGTTTACTTCTTCATTTTAAAAGTATTTGGCTTTTGTTAGTACGCGGTTTTACTAAACAAGGTAGTTCGTAGGACATGTGAAGCAAATTCAGATTTGCGAAGGTTGAAAGGTATCAGTGCCTCCCTCTTGCCTGTATATCCTATGGCTCATTGATAGAGCCATTACTCTTTACTGTTTTCATTTAGTTAAAAGAATTCCTTCTTCAAACTAAAGCTCGACAAAGCAGTATTCCTAAATATGCCTTGAAGAACTAAGTTAAATGTATAATACTTGCCTTTACTAGTCATTCTTTACACTTGCACAATTATGTAGTACTTATATGTTTACAGGGTTTATTATGTTTACAGATTAAGCTAATTTCTGTAGTTGCATTTTTATATTTTTAGTATTTCACTTTAGTCAAAAAAACCAAATAATTTGTTAAAAATTACCAAAGAATAGTTACAGTGCATCATTTTAAATTTATTACCATGTTTCTTATGCTTTTTAAAAAACTGTTTACTATGAAAATATTTTGCTATAAATCCAAAACTCTTTAGGCAAAATGCTAGAGATAGACTTCTACTTTAGCTAAATAGAAGTACATAAAAATCCTGTGCGTGCATTCAACAAAGGTTTACTGAATGCCTGTGATACGCATAGCTCTGTCTAGGCCAAGGGGTGAGAGTTGTCAGCTTCAAAGAAATCCATCCCCATCCTCAAGGAACTTAGAGATGTGTAAAGGAATTTTGAAACAATCAAAAGTCAGGGTGAGCAGAATAAGGCAAAAGGGAAAGTGTTCCAGTGCATCTGCAAAGGTAAAGTGTGCCAAGGCTGTATTTATATATTTTATACCTGTATTGGAATGATTGTAGAGAAAAATGCTCTTGAAAAAAGTTAAAGCTATTTCTCAATATGGTATTTTGGTGATTTAGGGATAATTGTAAATATATGTTATGAATCTTCTTAAATACACACACACACACACTCCAAGAGGTGTAAAAAGTGTATCCGGCTGTTGGTTACAGTTTGCTGGGGTCTAATACCATGTGTACTTTTCAGCACCTGGTAGGGATCTCATAAGTGACAGAAGCAAAGCCACTTTCCAAACATCATATCAGCAGCCCAGGTTAGAGAAAGTAATTCACAGATCCATGCACCCTCTGTCTTATCTTCTTCTGTGTTAACCAGCATTCAGGGGAAACGCCCTGCTTTTATCACTTACCAAATGTTTAAACTGAAGCAACATACTTCACCTCTCTGGGTTCCTGGTTCTTCATCTGTCAAAGGAAAATAACCACGAATGCACGCTCTCATTGTCATGTAAGATTGTTGTCCGTTCCAGAGAGATGCTCTGTAAAGTTTCATACAATCAGAAGGTACTTTGTGCCGGCCATCAGATTTTGTCAAATCAGGTGTGAACATGAACCACACTCCCAAAGAGAAATCTCTTCATTTAAACATGAATTGACTGCTAACAGACAGGGAAGGATCATCTCTGGTATTGAATATATACAAATATATGTATACATATTTTTATCTGTATATGGATCTTACCATCAGAATTCATTTTCTCTACATGAGCAAAGTAGTGTTAAGATGAGCCAATGCATTTTGGAATGTTCTCATTATGTAGAACTGAACATGAAAACTGCTTTTGTTAAAAAATGATTTTACCACATGATTGTTTAAATATCACTTCTGTCAAATATGGCAGATTTCAGAGCTTGAGAAAATATATAGCTTGCTTTTCATCTGACTCATTCACTTGGGTGATTCTGTGACTCAGATAAAACAGCATGTTAATAAGACCAGACACTCCCACCAGCACCCAGCCACAGACCAGCATCTGCTTCATTTTCCAGGTATGCAGTGATGGTCTGAAAGGAGCCTGAATCAAGCAACACAGCCCCTCATCCCAAACAGCAAAGTATCTCAAAACTCATTCTGCAGCTGGAAGTAAATAGGGTCATTTTCTTAAAGCAAGGATGTCATTTTTTTAGAACTTATAAGCACATAATTTTAGCCTATATTTTCTCTGTAATCAAACAAATTTTAACGGACATAAAATTGTATTACAAATGTGTTTCATCCTAATTTAAATGGTTTTATTTGTTTTTGTTTTTTATTTATAATCTGAAATTCCAGAGAATTATCAAGTCAAACAACTCTTTTGAATTATAAGCCACTTGACATTGTTTTCTAAAATCTTCTCATATGGGAAAATATTACCAAGATCAATGTATCAAAATTTATTGCATACTTTAAAATATAAAACCGTTTTAAAAAATCTTGATACCATAAATAAAGTTCTATTCTAGCAAAACCAAAAA EMBV3_37332 CACCTTACAGCAAGAGGAAGTGGGTGGAGTTGTGGGGCAGGAGTAAAGATATGTATTAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11675 CATGGAGATTGAGGTCTTGGTGGACGCTGACCCCGTGGTGAACAACTTTGTGAAGCGCTA Gene GeneID:514788|ACOT7:NM_001075682:121_cdna Constitutive 1 NULL GeneID:514788 16 GENE ACOT7 MGC139763 acyl-CoA thioesterase 7 EMBV3_36292 CTAAAATGTCTGAGCTGATGTATAACATCAGACAAAAGGACCATGGCAGTATGAAGCATC Gene GeneID:617379|RNF170:XM_002698710:124_cdna Constitutive 1 NULL GeneID:617379 27 GENE RNF170 NULL ring finger protein 170 EMBV3_30532 GAGCGTGCCTGTCATCCGACACCTCTTCGCCCCCCTGAAGGACTACTTTGCCTGTGAATA Gene GeneID:353354|DNMT3B:NM_181813:791_cdna Constitutive 0 NULL GeneID:353354 13 GENE DNMT3B NULL DNA (cytosine-5-)-methyltransferase 3 beta EMBV3_18052 TGCAGAAATATCACCAAGACCAAGAGGCTAGAGTAGGAGGAAATTTGCAACTGTCTCTGC Gene GeneID:614299|KCNIP4:NM_001076935:198_cdna Constitutive 1 NULL GeneID:614299 6 GENE KCNIP4 NULL Kv channel interacting protein 4 EMBV3_09592 CAGAAGCGGCCCTGGCCATCGCGGGCACCCGAGGAGTGTGGGGACACGGCGCTGTCCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39422 TCAGACTACAGTCCATGGAGATGCAAAGAGTCGGACACGACTGAGCGTTAAACACTTTTC Gene BVV0102_219667 + 0 NULL GK000001.2:26796053-28611802 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28722 CTTCCTGGACAGATTCCACAAAGCCTGCAGATCACACGGACTTGGCCCAGAAAAGGTTAT Gene GeneID:788658|LCN9:XM_002691612:251_cdna Constitutive 0 NULL GeneID:788658 11 GENE LCN9 NULL lipocalin 9 EMBV3_40545 ATGCTGCAAACAAATAATACTGGCATGTGGTCGCAGTGCCTCAGCCACACGGGTCTGCCC Gene BVT0102_020085 - 0 NULL GK000016.2:4614187-4685887 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070839 1 XLOC_042616 NonCoding TCONS_00070839 XLOC_042616 NonCoding NonCoding - 16:4659949-4661491 - TSS52683 1542 1 TCONS_00070839_1 35 0.998702983138781 1 0 8.82341485786291e-06 0 7.50161345199195e-07 0 0 0 1.47838466125439e-06 0 0 2.52004238277075e-06 0 0 9.31618121281943e-05 0.000382084723750437 0.00016057138583855 0.000188409333802914 0.00131114621676039 3.25433320105762e-05 3.02478542030535e-06 3.58746400214673e-07 9.84351623676981e-07 0.000112890117834148 0.000169559349632267 0.000287435018517446 2.24658686077469e-06 0 4.74963550724162e-07 6.85194546652137e-06 3.67296218218409e-06 3.89898738676892e-06 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-23 113 80.33 0.0784695201037613 0 noncoding AGGAAACCTTCTCACTGCCGAATCTGTGCCGAGCCTTGGGAGCACAGAGAGCAACATAACAGGGAGGAAAAATAAACAATTAAAACCCACAGATTATGAGCCCTACGGTAACTCCCCCAGCGGAGAAGCAGTGCAGACGCCTGCATACGCCACTAGTAAGCGGGGGCTGGGCAGGGAGGCGCGGCGCAGGCTGCATTGCTTAGAGTAAGGATCTGGCCTGAATACCTGGAGTGCTATCTGAGCGAAATAATTTGGGCTAGCAAACCAGAGTGTGGGATATCTACCACGCGAAAAGCCAGCCCTAACCTAAGACACCGCCAGGCTCGCGCACGGAACAAAGGGTTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCTGGTGACAGGCAGTCAGAGCCGGAAGGAGGCAATTGCAGCCCCAGAGAGACATTATCTATAAAACTGTAAGCAGGCTTCTTTGCTAACTAAAACTTCTTGGGGGGTCTGGATGGTCAACATCCGCCTGAGAAGGTGCGCGGGTTGTACAACTGGATAACTGAGTGGCGGGGAGGCAATAAGTTGCAGCAATCGCGTTCGCCAAACACCTCATCACCTGAGCTGCTTGGACCTGGGAAGGGCACAAAACTCAGGCCCAACCGAGTCTGCGCCTCTGAAGACTACCCGAGTGCCTGAACCTGAGCAGCTTGGACCTGGGAGGTGCAAGCAGCCCAGGGCCGGCCACGGATGGTTCCTGGCGGAGCAACCTAGAGCCTGAGCAGTGTGGGCAGGGAGGCTACACGCGCCGTGAGCGGGGGCAGACCCGTGTGGCTGAGGCACTGCGACCACACGCCAGTATTATTTGTTTGCAGCATCCCTCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAATGTCCTCCACCGTCCGTCCCTTCTGTGTCAGGGTGGAAACCAGACACTGAAGAGAGCAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCTACAGGCAATAGATTAAAACCCTGTGGTTAGTACCGACTACATAGGAAGGGGCCTATAGAGCTTGAGAAATATAAGTTGGACCAAGGAACTAGCCGAAAATGAACTGAACCCACAATACCCACAAAAAAACCAGAGAAAGTCCTAGATATATTTTTACTATTTTTATGATCATTCATTCTTTCTTTCTTTTTTTTTAAATTAAAAAAAATTTTTAAAGTCCTCTATTATTCCTTTAATTTTCACTTTTATAACCTACTATTACTTTGCAAAAAAAAAAAAAGACCCTATTTTTTTTTTAAAGCAAACTTCATATATACATTTTTTATAATTTTTTTGACCTTTTTTTTTTCTTCTTTTCTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTTGATTTTTAATTTTAGCTTTTTGGTACTTGTTATCAATTTTGTACCTATATTATTTTTTATAATTTCTGTGACTTTTTTTCCCCTCTCTTTCTTTCTCTTCTTCTTTTATATAACATTGTATATCTGAAAATCCAAACTC TCONS_00068597 . 3' 24397 TCONS_00068597 . 3' 25938 EMBV3_29589 CTATGTGCCAGGCTTTGAGTGGATACAGGAGGGAGAAGGGCACGATTAAAGGCCACACAA Gene BVT0102_338494 - 1 EMBV3_42986 GK000017.2:72597380-72602053 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39929 CGGCTGCGAAACCATCGGGCTGCTCATGAACAACATGGACGACCTGATCCGTCACTGTAA Gene GeneID:100336408|LOC100336408:XM_002698802:11_cdna Constitutive 0 NULL GeneID:100336408 28 GENE LOC100336408 NULL egl nine homolog 1-like EMBV3_17401 AGCTGAACCAGAAGTAGCTGGGCATTGGAGTCATGGGAAGATTAAGGAGGAACCGCCTGT Gene GeneID:526819|KLHDC9:XM_002685884:66_cdna Constitutive 0 NULL GeneID:526819 3 GENE KLHDC9 NULL kelch domain containing 9 EMBV3_42342 CCTGGGCTCTTTTCCCTTTCAATCTTCACACCTGATTATTCCAATGCCCACTTGACCTGG Gene BVV0102_234092 + 0 NULL GK000027.2:25457513-25462499 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18780 GAGTGCGCCTGCGCAGCTTTGGAAGCCGCAGAATGAAGAAGAATGGAGGAGAGCAGTGTG Variant GeneID:281108|CTSL2:NM_174032:75_cdna 64^199 2 EMBV3_25858 GeneID:281108 8 GENE CTSL2 CTSL CTSL1 cathepsin L2 EMBV3_41337 GCTGTTTGCTCTTGCCAAAGTTCAGTGAGAGAGTACATATGCTGCAGTGGTGGCAGACTC Gene BVT0102_075556 + 0 NULL GK000030.2:132986306-132997905 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248384 TCONS_00248392 TCONS_00248387 TCONS_00248383 TCONS_00248391 TCONS_00248388 TCONS_00248381 TCONS_00248382 TCONS_00248385 TCONS_00248390 TCONS_00248386 TCONS_00248389 TCONS_00248393 1 XLOC_151581 Coding TCONS_00248389 XLOC_151581 Coding Coding NHS X:132994512-133326968 j TSS185780 7986 1 TCONS_00248389_5 1349 0.00463310793889306 10 0.976008783143583 0.000232849322325383 0.00101899706261988 0.00136217785585775 0.00094525514735241 0.000923638277540417 0.000522055812226548 0.00073314280220851 0.00156959798272406 0.00196952745991674 0.000128354546616391 0.000172237229658586 5.75003364321064e-08 0.000288566770673769 1.35857529869168e-05 3.18994021934036e-08 4.14380319011962e-07 6.94851369628384e-12 2.76575147252297e-07 2.51367699381545e-07 0.00106374968514875 0.0012894130323669 7.32553716819202e-08 1.09646236638488e-07 2.76434132471722e-07 0.000415661135035715 0.00116632897957445 0.000340833044014693 2.31299887405216e-05 4.8524506512862e-08 3.85904494912691e-09 XM_005228397.1 NHS PREDICTED: Bos taurus Nance-Horan syndrome (congenital cataracts and dental anomalies) (NHS), transcript variant X1, mRNA. 0.0 1.415e+04 100.00 0.982218883045329 NM_001136024.2 NHS Homo sapiens Nance-Horan syndrome (congenital cataracts and dental anomalies) (NHS), transcript variant 2, mRNA. 0.0 9892 87.91 0.981968444778362 TCONS_00248389_5 sp|Q6T4R5|NHS_HUMAN NHS_HUMAN Nance-Horan syndrome protein; 0.0 2309 89.66 0.999258710155671 1 coding 1 0 1 1 -0.261794524736537 0.0801479947300915 -0.0169539248338654 0.722451008403935 GGGAATTAATGAGTTCGTGAGTGGAGAGGAAGCATTTCAGCAGAGGAAACCAGAGCTCCTGCCATGGCGCTGAGCTGTCTGCTCCATCAAGGACTGCTTCCATCCCCATTTTCTAGATGAGGAAACCCAAGCTCCAAGAACTGTCTCCAACCTGGACGTCGAGAGCAAGCTGAGCGTTTACTACCGTGCACCGTGGCACCAGCAGAGAAACATCTTCCTCCCGGCCACCAGGCCGCCCTGTGTGGAGGAGCTGCACCGCCAGGCCCGGCAGAGCCTGCAAGCCCTGCGCAGAGAACACCGGAGCCGGAGCGATCGTCGGGAGCAGAGAGCTGCTGCACCCATCTCAGTAGCAGCTCCTCCACTGCCCGCCTACCCCCCGGCTCACAGCCAGAGGAGGCGCGAAGCCAAGGACCGGCACTTCTTAACGTTTAACAGCACCCGTTCGCCCTCCCCCACTGAATGTTGCCACATGACCCCATGGAGTAGAAAGTCCCATCCCCCAGAGGATGAAGATACAGATGTCATGTTAGGGCAAAGGCCGAAAAACCCAGTACACAATATCCCCTCCACACTGGACAAGCAGACCAACTGGAGCAAAGCGCTGCCTCTCCCGACGCCAGAGGAAAAGATGAAACAAGATGCCCAAGTGATTTCTTCCTGCATTATTCCCATCAACGTCACTGGAGTCGGTTTTGACAGAGAGGCTAGTATACGCTGCTCTCTTGTTCATTCACAATCTGTGCTACAGCGGAGACGAAAACTGAGGAGGAGGAAAACCATTTCGGGTATCCCCAGAAGAGTCCAACAAGAAATAGATTCTGATGAATCACCCGTGGCCAGGGAAAGGAATGTGATTGTGCACACAAATCCAGACCCTTCCAACACTGTCAACAGGAGATCTGGAACCAGGGACTCGGAGTGCCAAACTGAGGATATTCTGATTGCTGCTCCATCCAGAAGAAGAATCAGAGCTCAAAGAGGTCAAAGCATTGCAGCTTCCCTTTCTCATTCTGCTGGCAACATTTCTGCACTGGCAGACAAAGGTGACACCGTGTTTACTACTGCAGTGAGCAGCCGCACGAGATCTCGGAGCCTTCCCAGGGAGGGCAACAGAGGTGGGGATGCTGAGCCCAAAGTTGGTGCTAAACCCTCAGCATATGAAGAGGGGGAGCCTTTCGTGGGAGACCAAGAAAGAACCCTTACCGATTGCAGTGAGGCCCCCAACAGCCCCAGTGCACAGGAGCACCAGCCTGCTTTGAGCCTGGCCTGTTCTCAACATCTTCACAGCCCCCAGCACAAGTTAAATGAGAGAGGGAGGTCACGTCTGTCCCGGATGGCTGCCGATTCTGGCAGCTGCGACATCTCCTCCAACTCAGACACCTTTGGGAGCCCCATCCACTGCATTTCCACAGCTGGCGTCCTCCTCAGCAGCCACATGGACCAGAAAGATGACCACCAGTCATCCAGTGGCAACTGGAGCGGGAGCAGCTCCACATGCCCCTCACAGACCTCAGAGACAATCCCTCCTGCAGCTTCGCCTCCCCTCACTGGCTCTTCACACTGTGACTCGGAGTTGTCACTCAACACGGCCCCTCATGCTAATGAGGACACCAGTGTCTTCGTGACAGAGCAGTACAACGACCAATTGGAGAAAGTGAGAGGCCACCGGACAAACTCCTTTACCTCCACGGTGGCAGACCTGTTGGATGACCCCAACAATAGCAACACGAGTGACAGCGAGTGGAATTACCTACACCATCATCACGACGCCTCCTGCCGCCAGGATTTTAGTCCTGAGCGTCCCAAGGCAGACAGCCTGGGCTGCCCAAGCTTCACAAGCATGGCCACTTATGACAGCTTTCTGGAAAAGTCTCCGTCGGACAAAGCTGACACCAGTTCTCACTTTTCAGTGGACACAGAAGGATACTACACCTCCATGCACTTTGACTGTGGTCTCAAAGGCAGTAAGAATTATGTCTGTCACTATGCAGCCCTGGGCCCGGAGAACAGCCAGGGCATTGGGGTTCCTCCTGCACTTTCAGACTGTGCCTGGCAGGACTACTTAGACCACAGGAGGCAGGGGAGACCAAGCATCTCTTTCAGGAAACCAAAGGCAAAGCCAACTCCACCTAAACGTAGCTCATCATTGAGGAAGTCTGATGGAAATGCGGACACTTCTGAGAAGAAAGAACCAAAGACAAGCAGTGGCCAGCTCCTGCCTCACAGTTCCAGGGAAATGAAGCTGCCTCTCGATTTCTCCAACACACCTTCTCTAATGGAAAATGCCAATCTTCCCACCAAGCCAGAACCTTCGTGGATGAACCAGAATGAACATGGTATTAAGGAACCTCAGTTAGACACTCCAGATGTTCCACCATTCAAAGATGAAGGTGCTGAATCAACTCACTATGCAGACCTCTGGCTTCTAAATGACTTGAAAACAAATGACCCTTACAGATCTTTATCGAATTCAAGCACTGCTACAGGTACCACTGTTATCGAATGCATTAAATCTCCAGAGAGTTCTGAATCCCAAACATCCCAGTCAGAATCTAGAGCCACCACCCCCTCCCTTCCTTCTGTCGACAATGAGTTTAAACTGGCTTCACCAGAAAAGCTGGCTGGCCTGGCATCTCCATCAAGTGGCTACTCCAGCCAGTCTGAAACGCCAACATCCTCTTTCCCTACTGCTTTCTTTTCTGGCCCACTGTCTCCTGGAGGCAGCAAAAGAAAGCCGAAAGTCCCAGAAAGGAAATCTTCCCTCCAGCAACCCTCTTTGAAAGATGGCGCTCTGTCACTAAGTAAAGATCTGGAACTTCCAATTATACCTCCTACCCATCTTGACCTAAGTGCTCTTCATAATGTCTTGAACAAACCATTCCACCACCGCCACCCACTACACGTCTTCAGTCATAATAAGCAGAACACAGTAGGAGAAACTCTGAGGTCCAATCCTCCACCGTCTCTTGCAATTACACCCACGGTCCTGAAATCAGTTAACCTTAGGTCCATCAGTAAATCTGAAGAAGTTAAGCAAAAAGAAGGCAACAACACAGATCTCCCCTACCTGGAGGAAAGCACTCTCACCACAGGTAAGATTAGGCCACACGTGATTAAGAAATCATTACCATGTCAGTACACCACTGAAGACACCATCCTGTCCTTTTTAGACTCCTCTGCAGTTGAGATGGGACCAGATAAACTACAGTTAGAAAAAAAACATACTTTTGATGTGAAGCATCATTGTGATCCAGAAACAGTAACCTCAGCTGGTAGCAATCTTCTAGATTCAAGTGTCACAAGAGACCAAATGCATATGGAGAGTGAGCCTGTTTCAGAAAACAAACCAAGTAAAAGTTGTGACTTTCTCACGGAAGGCTTTCAGAGGGTCTCTGCTGCTCGCCCAAATGATTCAGATGGTAAGACACTGCAATATGGAGCTGGTCCGGATGGAGCCCTAGCGCAGGTCCAGAAGTTGTCTTTTGTAGATCGCGAGGAAGCTGCACCCCCAGAGTCTGTGGATGTGCTCACACCTCAGTCAGACTCTCCAACTCGAGTCACAGACATAGGCTATCAACTTAAGCCTCAACTTGGGATGAGCCACCACCATGACAAAGTGCCTGGGAATATCAGCTCTGAAGCAGAGATATCAACTATAAATCCATGCCCTGAAAAGTGTTCTGAGCAGGAAAATATTGCTTCAGGGATTTCAGCCAAAAGTGCCTCTGATAACAGCGGAGCAGAGGAGACCCAAGGAAGTGTGGATGAGGTTTCACTGAAAGAATCGTCACCGAGTGATGACTCTGTGATCTCACCATTAAGTGAAGACTCTCAGGCTGAAGCAGAAAGTGTGTTCGTGTCTCCCAACAAACCTCGAACAACTGAGGATTTGTTTGCAGTTATTCACAGGTCCAAGAGGAAAGTACTTGGAAGAAAAGATTCTGGGGACATGTCTGTCCGCAGTAAATCGAGAGCTTCCCTGGGCAGCAGTAGCAGCAACAGTGCCGGTTCTGTCACCTCGCCCAACAGCAATGTGACCACCCCAAACAGCCAGAGGTCTCCTGGCCTCATCTACCGAAATGCCAAAAAGTCCAACACATCCAATGAAGAGTTTAAGCTATTACTCCTGAAGAAAGGCAGTCGCTCAGATTCCAGTTACCGTATGTCTGCTACTGAGATCCTGAAGAGTCCCATCCTGCCCAAACCTCCTGGGGACCTCACCGCGGAGTCCCCCCAAAGCCCCCATGAGGCCCATCAGGGGTCACCGGGAACTGAAGCACTATCTCCCCTCTCTCCGTGCTCCCCACGGGTTAACGCAGAAGGGTTTTCCTCGAAGAACTTTGCCACCTCAGCATCAGCCAGGGTTGGACGTTCCCGGGCTCCTCCTGTGGCCAGCAGCAGCCGCTACAGTGTCCGCTGCAGGCTGTACAACGCGCCCATGCAGGCAATCTCTGAGGGTGAGACCGAAAACTCTGACGGGAGCCCACACGACGACCGATCCTCCCAGAGCTCCACGTAGGTGAACCCGCCAGGCTGGCTATCCAAGGCCAAAACCTTACTCATATGAGGATGGAGGAACAAAACGGAAGACGTGGGATAAGTCAGCATGTGGTGGGGTCCCATCACGTTTACCAATGAGTTCCTAAATATTTTCTGGGGAAATGGAAGGTGGTTCGGTCTTTCTTATGTTTTTCAGTAGCTGCACTGTCTTTCATATTTTTCTTTAGCATAGTTTGATTTACTCAGTCTCATTCCTTTTGATAATAGAGAATTTTAAAATGTGTGCTTTTCACAAAACCTAGAAAATTTTTTTCCCAGAGCTGCCTATTCAGAAAACAAAGCCCTCACTGTCATAATTCATATGAAGATGAAATTACTCTGGAGGTTTGGTATATTTTTACATTCAAATGGACTAAAGCAAAATTTAGAAGAACTACACACATGTAAATACCATATTTTTGATAAAAATGTGTAAATAGATTTATCAACGACGAGTGGACATGTGGCCAATTATCTACCACACACCAACTGTTTATAGAACACAACAAATACAGTGTAATAATTGTATTCTGTGAATACCATTTTCATATCGAAGACCATATTTAAATGTCCACCAATATGATTTCTGAGTGATAAACCTCAAATATGACTTTTAAACTGGTGAAATAAAGGAAATCTTGAGGTCATATAGTGAAATGTGATTAATTTAAAACAATGAATTCAGACTTAACCATTTTGTGACAAATTGCAGCACCACACAAACTACTGGTAACACGTGGCTGATTGGCCATGTGGTAATCTGAACAGAAGTAAAAGCATGCTTTTGATTTAAAAAACAAAATTAGTGAGAGAAGTCATCATTTTCAATACAAAGCCCTGAACAACAGCACTTGACAGTGTCCTTTTAACTTCAATTTTTCAATGGATTGCTTTAAAGAGAATGAGTAGGGGAAACAGTAGTTAATTTTAGGTTCCATTTTATATTACACTGCTGGGGACATAAACGTCATAATCTGATAACAATTATCTTTAAACTCCTTCAACAGTTTAGCAATTAGCTCCAGGTTGTTTAATGAACAAAAATAAAACATAAGCATGCCACAGAGCTGTGGATTTATCAGTAAGTACCTGCAATGAGTTTTCAGTGATGCTTTCTCTCTGTGCTGATGAGATTCATGCTACCTAAAAATTAACAGAAATGACACTGTGAACAATGTAGTTGGGAAATAGGTATGTGTATATGCATTATTTATATTCACTGTTAAATGGGATTGGGGAGCATCTCTGGTTCACAATGCTACATACAACTGAGTTTTTGTCTGATTTTACTCTATCTGCTTGATGGCAAAAGGGGAGGGTGGTGGGTGGGACAAGAAATGTCAGGGCAAGTGCTCTGATAAAATGAAGGCAGGGAAACAAGCTGAATTACTTGAAATTACTTGACTTTTCTTGTCTTAAAACTGAAAAAAAAATGTAGTTACAAGTTGAAATCTGCCAATGGGTTATACACCCGTGATTTTAACATGAACTGATACTAATGTTTGAGATGATATGTCAGAAATATAAGCAGCTATGAACTTGGAATATGTTTTGAATGAGAGAAGGTAGAAAGTAGAGAACTAAGAAGGAATATGGCCTATAAAAGAATAGAATGTGATTAGAATGATAGAACATACCAGAGTTACCAAGAAATTGATAAGCAGCTGGTTTTAAGCTTATGCAAGTGGCATTTGGGAAAGTAGAATGTGGGAAAGGGGGTTCGTGGTTTTGGTTTAATTCATGCAATATGAAGGAGAAAGCCTGGTCTAAGAAGATGCTGTCTTTCAATAGAAACACTTTATAAGACATTACAGAGTGAGAATAACAGGATCTGATTGCTGTTGGGTTTCTGTTTGTTTCTTTGGGGAAAAAAAAACCAGTTTATTCTGTTTTCGCTATCAAAATGTGTTTCTTAATTTCTTGTCATCCTTGTGTGTAAAAGGGGTGCTGGGGGTGGTAGGGTATAGGAGGGAGAATGTGTGTGTGTGTGTATGTGTGTGTGTATGCTTGTGCAGGGATAGATAAGCTACCTGGTAAAGGATACATTTGAACATCCATAAAAGTTATACTTTTTATTAAAAGAAAAATGTTTGGGCTTTTGGAACAAATGGACCATCATTTCTCATTGGAACCCATTAGTTAAGAAAACCAGCATGGTTTAACACCACATGGAAACATGAATAACTTTTTTCTCATGCTTTGAAAAGTACACTTGGCAAACTTTTAAAAATAAGGTTTTTAGACAAATGCGATAAGAAGTCATTTCCAGTCACAATAGGTGATCTTTTGTAATTTTCATAAAAGCAGTTCGTTTGCAGTATGGCTTTTGTGTAATTAGGGGTTTTTTAGTGTAAAGAAAGGTATGTGGGCTTTAAAAGTGATTCTAAATCTTGAACAGAAAACACAAATTGGCTTTAACAAATATGTCACCTTATTATTGATATTAATTTAAGTAATGGTACCATATATATATTTTAAAATACATATTGACTTGAATTGTGAGGCAATAAGAGCATCTATATGTAATGATCACAGAACTAACCCTTAGAATATAGTTTTACTTATTTTGTTTACTCTAAAAATCTATAGCAGAGTTTCTCTATTTTATATTTCATAGATTTAAAAAAAAACCCAGATAAAGATGGATTTAAAATTCACTGTGCAAAAGAGTATTGAGTAACAAACTGAGTTTTAAAAAAGCAAGAAATTCCTTTGTAATTTGGAATAATCTACATGGCTTTATCACATAGCATATAAGACCAAGATTTAGAGGGCTGTTTTCAACATCACTGCCGTCTTGAAGCAGGATACACACATTAGGTATTGTGAAGAACATCAACCCAAACTTTTCTTCTGTTGTTTGCACTGATGCTATTTTTTCTTCTTTTATGTTATACAACATGTCTATGTTGTGTGGGGGAGATATTTTTTCCTTATTTTTTGATTTTTTTTTCTTTTTTTTTTTGGCTAAGTAGAGGACATGGACTAGTTGTAGCAAACAAAAACATGCTGTTTGCTCTTGCCAAAGTTCAGTGAGAGAGTACATATGCTGCAGTGGTGGCAGACTCAGAGAATTAGATCATGACAAAGATTTACAACTATGAGGAAGGTTATAGTGTAACTCTTTTGGTACTAGAACCAGTTCATGCTGGCCGAAAGACAATGGTTTATGGACTTGCCTCCATTTTGTATTTTTGTAATATTTGTAAATATGGACTTTTTAAATTGTTGCAAAAATGGTTTCTTTTGTAAGATGTTTTCAACGTTTACATTCAATTCAAGCCTTTGTATATTTTAGAGCTGTGCAACACTTTAAGTCTTGTATTTATTTTTAGTAAAAATGGTGACAATTTCATTGTGAACCCCTCTCAAAAAAATGTACCAGAAAAGTTTGATTACCTAGAAAGTGTGTATAGAAACTGCAAATAAACGTGACTGCAATTAAAC EMBV3_20681 GTCGTTCAGGTAAGGAAGAATCAAGTAGCAAGTAGCTGGACCAACAGAGGGAACACAAAG Gene GeneID:539217|SMC2:XM_002689875:2_cdna UTR3_Alt 2 NULL GeneID:539217 8 GENE SMC2 NULL structural maintenance of chromosomes 2 EMBV3_01758 ACAAGGAGCTCTTCTACGGCCACGGGAATCACCTCATAGATCAAGGGTTAGACGTCGGAA Gene GeneID:504711|GALNT5:NM_001143859:70_cdna Constitutive 0 NULL GeneID:504711 2 GENE GALNT5 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5) EMBV3_10538 TGCAGTAGATGTCACTGGAGTGCCCGCTTTTCCAGAATGTCTCCTGTCCTCATTGCCTTT Gene GeneID:508561|FAM83D:NM_001083393:958_cdna Constitutive 1 NULL GeneID:508561 13 GENE FAM83D MGC140374 Protein FAM83D EMBV3_27809 GAAGAGGACAGGGATGGGAGAGACAGCGTAGCCTCATCATTATAAAATCTTTCCAAGTGC Gene BVV0101_066561 + 0 NULL GK000021.2:22937022-22949799 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09224 GATCTTATAGATTAGGAGTACATACAAAAGGCTGTTGAAGAGGCATTTGTACCAGTTATC Variant GeneID:338051|PAPOLA:NM_176647:151_cdna 378^487 2 EMBV3_06943 GeneID:338051 21 GENE PAPOLA MGC127552 PAPOLB poly(A) polymerase alpha EMBV3_33991 GTTGTCTCTGCCTACAGCGTTGCCCTCAAACCCGATGACCCTCTCAACTACCTCATCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31618 GGGACAATACGCCTTACCATCCTTGACCAGTCTGAAGCAGCTGTGAGGCAAAACCACGAA Gene GeneID:539124|TRAF6:NM_001034661:57_cdna Constitutive 1 NULL GeneID:539124 15 GENE TRAF6 MGC128039 TNF receptor-associated factor 6 EMBV3_29512 GAGACTCTACCTAGGGCCCGCCGGTGTAATAAACTGCACTCCACTATCTACATTGTCCTT Gene BVV0102_132038 + 0 NULL GK000012.2:36922471-37655977 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002737 TCONS_00173459 TCONS_00093074 TCONS_00039571 TCONS_00252563 TCONS_00005729 TCONS_00153229 TCONS_00031562 TCONS_00232332 TCONS_00099410 TCONS_00086731 TCONS_00238685 TCONS_00005730 TCONS_00153225 TCONS_00086732 TCONS_00168787 14 XLOC_000673 XLOC_104361 XLOC_057071 XLOC_023388 XLOC_155504 XLOC_001354 XLOC_092994 XLOC_017810 XLOC_141817 XLOC_059653 XLOC_052235 XLOC_145352 XLOC_092990 XLOC_103183 Coding TCONS_00093074 XLOC_057071 Coding Coding - 19:27886901-27891732 - TSS69915 2319 1 TCONS_00093074_5 124 0.134109529969815 2 0.520289855072464 2.75193548498967e-06 3.0725567105295e-05 3.89075123269535e-05 9.54911375707921e-07 4.56217242602327e-06 0.000157352384425572 1.92688808839989e-05 6.87017400898967e-05 6.80477434087688e-06 5.72196854150328e-05 9.87142120768925e-06 3.08381719667613e-07 9.89834451040077e-06 1.01422856866466e-06 1.19912327392835e-05 0.00475755402373939 0.00191636982378832 0.00195530013699725 9.04115957717096e-05 5.97955408258542e-05 6.90896955768733e-07 0.00176735366917894 0.000225626284026267 0.00192027055274531 6.82902072893928e-06 9.70259891354643e-06 9.16939953816003e-06 0.00019090584202574 0.000158052329126496 0.00016558041305931 XR_238659.1 LOC101902384 PREDICTED: Bos taurus uncharacterized LOC101902384 (LOC101902384), 0.0 2259 100.00 0.539456662354463 TCONS_00093074_5 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 3e-23 95.5 43.75 0.879032258064516 1 noncoding 0 0 0 0 -0.182001319589134 0.303682127220271 0.0228346842140227 0.654576793358075 ATCCTCACCTGATCAAGCCCACCAAGGCAGAACGGACTTTAAGGTAGAAACAGTCTTGGACCACGTTGTGTTCTGGTTCGGCCTTGCTGACCGGCAGGTGAAGACACGCCGATCCCCCTTCTCCCTCTGGGATCTGGCAGGATTTGGACAAGGATAACCTGCCCCTCCCCCATACTGGATGACTCGCCCACCGGCCCAGTGCTCCACCAGGACGGAGGCCGCCTTAATTCCAGATCCAGGGCCAGGTGAAGTTCCTGCAGCAGCTGCTGCTCCACCACCAGCTCTCCCACAGTCGTAGAGACGCCACCTTGGCAGGCTCCGATCTGGTGGCAGAAGCCTCTGGCCAACACTTCCAGGATCTGGCTCCAGCCGAACAGCCCAAGCTATACCCGCTTTTCCCGTTAAAGTTGCAGGTATTGTCCCTTGGATCCATCATACGAGGGTGAAGAGAACATATCACGCAGACCCAGAAAACGCTGAGTTGACTGCACAGATGGAACCCGCTGACCCTCAAGAGACTAAGACCATCCTTAAGAAGAAGGAAAAGATGATCCCAGACGAGCCCCTTGAGGATGAAGCCACATAATCAACTCCTGCTGCTTGGTCTCATCAACGTGCACATTCCTATGCCAACTTCCACAATTCTTCCAACTGTTGGGTATGTGGGGCTATGCCTCTGTCTGTGATGGATGGACTTCCCTGGTGGCTGTCACCGCTCCGCCAAGGAGATTTTAAACCACTCTGCTCTTTTCTGGGACACAATCATAATCTTTCCCTGCTCTCTGGGTGTAAGCCAGACCTACAGTCAATAGATTCAGGTCATAGGGTTACATTTGATATAAATGCCAGTGTAACAAAAGCCTAACCTACAACAAGCCCTGGTAAATCTACCTTATTTACATGCTAGGTGGCCAAGATCTGTGTTTCAGTGGTATAAGTATATTGCTGCCTTATTCATACCCTCTATAGGGACAATAGATATTATGATTAAAGTAGAAGCCTTGACTAATTTCACAAAACAGGCCCTCCTAGATAAAACAAAAGCCATCCAAGCCTTAAATGAAGAGCACATCCAAATGAGAAAAGCAGTAATTCAAAATAGAATGGCTTTGGACATACTCACAGCTGCTCAAGGAGGGACCTGTGCTATAATTAAGGTTGAATGTTGTGTATGCATTCCTGACTTATGGGGCAATGTATCAACTGCTTTAGATGTCATGAAAAACCAGGTAAAAGCAATGTCAAATGAAAACGTTCCTTTCTGGACTTTGGTCCTATCTTGGGTGAAGGGCGATTGGTGGAAAACTATATTTACCATTGTTATAGTTGCCTTGATAGTTCTGCTTTGTGAACCCTGAATTTTACAATGTATTCAATGTATCCCTATGAATGATGCTCATAATATGAATTAAGAGCATCAAGATGGGAGAATGAAGGAGGAAACAGACAGAGCTGGACTCCATCTTAGGCCTGGCTGCGAACATTAGGCTACACGCATGGTCACCCTCCCAAAGGACTCTGAACTTTGTGCCCGGTGTCTATAGAAATGGCATACCCATGGAAAACCAGACCCCTGGATAAAAGAGCCTCAAGACTTGTACTTGGATTCTCCTTTGCCTAAAAGAGTATGCTAATTATCTCTGTAACAGAACAAAGTGGTAAATTCCATTATGTTTATCCGGATATGACCCCAGACCTATTGATAAACATCCACTGTTTATCTAGTCTTGTGACACAGGAATCATGGGTTAACTTTGATCCCATCTCTCTTTTACCTTGTCCAGACTAGTTTCAAGGAATTTGGGGAGGTGGGTTTGAGCAAGTACACTTAGGGTATATGAGGCTTCCCTGGTGGCTCAGACGGTAGAGCATCTGCCTGCAACGCGAGAGACTCAAGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAACATTCCATGGACTGAGAAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAAGAGTCGGACATGACTGAGCAACTTTGCTTCACTTAGGGTATACAAGGTTTTCACAAAAAACTGGTCAGGTTCCTTGGCTAAGAGGAGACTCTGCCTTGGGCCCGCCGGTGTAATAAACTGCACTCCACTATCTGCATTGTCCTTCCAAGTGAGTTTGTTTTCCGGAAGGCATGGCTACAACACTGACAGGTTGCATCCTAGACTATTTGAATCCCTTACCTGAAAACCCTCATTTTTCTGTTGTTGATTCTAAGTTATTATATTACAACCCTTCCCAACCCTACCAACCCCTGTTCCTACCC TCONS_00093075 s 5' 1023 TCONS_00093075 s 5' 5853 EMBV3_33133 GCGCGGCTTTGGGAGCAGCTCGTCCACTTCCACCTGCGCAACCTCGCCGTGGCCATGTGC Variant GeneID:789063|PSMG4:XM_002697605:88_cdna 160^210 1 EMBV3_13937 GeneID:789063 23 GENE PSMG4 NULL proteasome (prosome, macropain) assembly chaperone 4 EMBV3_08315 ACCCCAACGTGTGGTCTGAGATGCTGAACAAGTCACCTATCAAGTACACCCCTCAGGTGA Gene GeneID:514666|APEH:NM_001083431:166_cdna Constitutive 1 NULL GeneID:514666 22 GENE APEH AARE APH MGC139504 N-acylaminoacyl-peptide hydrolase EMBV3_12563 ACTAAACTCTTCCAGTGTGAGTGTGGCATTGTGTCAAGGGCACGGCTTTCCACCCAGCAT Gene BVT0102_127674 + 0 NULL GK000009.2:10768348-10869582 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26024 TTACGAAGGTGCCTATCACATCCTCCACAAAGAGCTTCCTGAGGTGACCAGCTCTGTCTT Gene GeneID:505290|MGLL:XM_002697155:100_cdna Constitutive 1 NULL GeneID:505290 22 GENE MGLL NULL monoglyceride lipase EMBV3_23198 CTGCACGTGTCCTACTCCCCGGACTTCAGCACCATGACGCACCTGCTGGAGAACCTCAAA Gene GeneID:100139180|MATN4:XM_002692475:547_cdna Constitutive 0 NULL GeneID:100139180 13 GENE MATN4 NULL matrilin 4 EMBV3_10857 CAAACAAAACTCCTGGCTGGGGGCAAGAACAAAACTTTCAACCCTGCAAGTCAACAACAT Gene GeneID:782902|VSTM2A:NM_001083528:2_cdna Constitutive 3 NULL GeneID:782902 4 GENE VSTM2A MGC142894 V-set and transmembrane domain containing 2A EMBV3_31971 GCAACCCCTAAAAAGGGCTCTAAAAAAGCTGTGACCAAGGCCCAGAAGAAGGACTGCAAG Gene GeneID:782350|LOC782350:XM_002688173:99_cdna Constitutive 0 NULL GeneID:782350 6 GENE LOC782350 NULL similar to histone cluster 1, H2bd EMBV3_07114 CCCTTATTCAACTTCTTCCTCAAACACCGGATGCTCTAGTGGTACTTAAGATGCATGACC Gene BVV0102_101631 - 0 NULL GK000017.2:71941972-72041476 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076261 TCONS_00076260 TCONS_00076259 TCONS_00076263 TCONS_00076258 TCONS_00076264 TCONS_00076262 TCONS_00076257 1 XLOC_046766 NonCoding TCONS_00076263 XLOC_046766 NonCoding NonCoding LOC100848149 17:71963318-71972979 j TSS57273 6902 4 TCONS_00076263_6 91 0.151260504201681 3 0.285817805383023 0.000726066063326637 0.00184540205042245 0.00156660261636906 0.000540662763602571 0.000851466456545111 1.17468515886697e-05 0.00035069138900521 8.23476060218052e-05 0.000135706516719663 0.000472307826384595 0.000326036543297751 0.000244301694532523 0.000119307898933157 0.000938917182905214 0.000358019463004031 0.00827929922317819 0.00261260549080426 0.00587483116192977 0.0012220247381699 0.00121818076578368 0.000690912244362665 0.00276676095993531 0.00196039727568355 0.00550317918770218 0.0006128079629847 1.56921599499594e-05 0.000292152001726855 0.000724044065771721 0.000625775360362443 1.0705030912931e-07 XR_139546.2 LOC100848149 PREDICTED: Bos taurus uncharacterized LOC100848149 (LOC100848149), 0.0 1.147e+04 100.00 0.921616922631121 NR_002323.1 TUG1 Homo sapiens taurine up-regulated 1 (non-protein coding) (TUG1), 0.0 4684 76.83 0.872935381048971 0 noncoding CTTTCTACTTTGCCTTTTCCTCCTTATGCCGCCTTAGTGAGGGGCGGGAGCTCTGGCGGCAACTCCGGGGTGGAGAAGCGAGCTCCGGAGTCGGAAGAGCTGTGTTTGCTTCCGGGCCTAGCCACCAGCTGGCCGAGTGACCTTAAGCAAGTCACTCAGTAATTTGTCTGCGCCTCAGTTTCCTCCTCTATCAACGTTTGTGGGATTGAAAGCGCTTTGTAAACCATAAAGCGTCGGTGGATGAAAGGAATGATTATTGTTCGTTATGGTTGGCTTTTTTTTTTTTTTTTTTTTTGGAGTTGTAAGAAAACTTAGAAATTCCCAGTCCTTGGATATTGAACCTGGAAACCTTGGATTGGAGATGGAGATCCCCAAACTCCCTGAAATTGTGTGCAGAAGTTAGTGGGAATATGCAATTAAGGGAAATGAGGATCCATCGCCATCAAGTTTTCAGAGGGGGCTGTGACCCGGAAGAGTTAAGAACCACAGTTCCTTTGCCACAAGGAGGAAACTGAGGCTTAGATGTCATTCGGGACCCGTAACAATCAAGTTGAAGCCCCTGTTGAATCCTTGGGATATGTGAGCTGTTCTATGCATAGTGGCTACTCGGGGTAACAACACTCCACTGCTTGGCTTCTGTTCTGAGTCCTTTCACTATGGGTTGCCTGAAGGGCGGCTGATGCTTATGGTACAGTGACACCCAATATAAAGCAGCTGAAACTAGGAGTGGATGTGTTCTCTAGTGTCAAGAAGCCTATTCAATCTTTGGCCCAACAACTTTTTATTTTCTGGTGCCTGACTACCTTTCTGACTCTTTCATTGACCATTTTCCATGACCATGGTTGCCATCCGTTACTTGCTCTTGTTTTATATTCTTAGCTCCGTGTGGTTGGTAGTGAGCAGGCTTATTTTTAAATGGTGCTGCCAAGTCCAGCTAATTAATGGTGCAGGTGGGTTTTTAGCAAGCTGTCTCACTGGAATAGACTGAACTAGACATGGAATTCCTGAAGATGTTTGTTTTTATTAATTGAAGGTTGACATTCTCTGAAAAGTTTTGTTAGAACTTCCTCTGAACCTCAAAGTCAGTAGTCTGGAAGTGTTTCAAACCTTAACTTTCCTCCCTGCCTGCTTTGTATTCTCTTTGCTTGCAAGTGTGTTATTAAGATGGCCAAAATGCCAGTTTTTGCTTCTTTGTTAATTGTCAGCTGCTTTTTATCAGATTCCAGGCCATTGTCCAGCAAACACTATAGAAATGTTTGAACACTTGGATTTCAAACATTTTCGTTTTGTGGAGTGGTGCTTACCGTGGTACAGCTCTAAGTAAGCAAATGCAAACACACTTAAGTGTTTTGTCTGTTAGGTGTTAGCCGGTTCTGCTATTTCATACAAATGTCTGGAAAAAATCAATTGACTGTTCCCTTTACCTGGAGGGCAGAGACAAATGATCTCAATTCCAGAGAAATGACTGTTTTGGAGACAAATGTGTTGGTCTTTTAGCTCTTTTGTAATTAAATCTGGATGTACCTCAAAAGAATCTTGAGACTGTGGTGATACTATGCTTTCCTCAGGAGAAAGGAGGAGAAAACCAACTGGAACTCAAAGCTTGAAATTCTGTGACAAAACATGAACTGTCCAGAATAGGAGGTTGAAAGGGTTTCACTACAGCGTTCTGCACTCGCTGGAACCGATGTCTTTCAGTGTAATCACCGCGTGGGCTCCAGATTTCCAGAATTTCAAGAACTGGATCTGGGACCTGGAAGAAAATACCAGGGTGTGACAGGAACTCGGGAGCTGGACTTGTTTTTGAATTTGAGGAGTGTTGTCCTTGTTTTGAAAAAGAGACAATGACTGAGCAAGCACTGCCACCAGCGCTATTACTGGAAATTCGGAGACCTGAGTTTTCACCAAACGCTCAGTGCATACTCTGGCGATGCTTCATCCAAAGTGAACTACGTCCTGTGCCTCCTGGTTGCCGAGTGTTCATCTGGATCTTCTGATCACCTTTGTGCTATTCCATCAGCCTACAGATCTGGTACCTGGATTTTTGCCCATGGTGATGGATTCTGCCACCTCAGTGCTGAAGAAGACATCATTCCAGTGGACCACTGTGATCTAGGAGGCGTATCCAGCGAATCATGATGTGGCCTTCACCTCCACTCCTGTCCTGTTCTACCCAGATTCAACACAGCCTTTTGTAGTGAAGTTCAACTTCTCAAGCCAAATAGCTGAAGCTGTTTTATCACAACAAAGGTTCAGCTTGTTCCATAAATGTGCATTTCGTTTCTCCAGTTAAAGCTTTCAGAGACACATAATAAATTTGGACCAGGGGATTTTTAGTTATCAGCACTGTCTGAAGAATGGCAGCATCTTTTTGAGAACCATATCGGACCATGCCCCACTGTCTCAAATGATTGAAATTCAGGAATTGTCTAATCTGGACCCCATTCTTTTTCCATTTCAAATCTGTAGTAGCCTACTGAATGAGCAAGCAGATATTCTGACCCGTTGGGATCAAAACAAAGGCACAGTGAACTCACAGCATCTTCTTTGGGATTACTCAGGAACCAGAACTTTTCACACAAATGTAAGAAATTCTACCAAGGAATCCCTTTACCTAACAGCATCTCATAAAGCTCCAATCAGATTCCAGAAAAGGCCTCTTGATACATCCAGCATTTTGTGAACCAACTTACTCTTAGATCATTGGTTTTCCAAAGGCTTTGTGGCCATGAAGCACTTTGAATGAAAACTTTATGGAAGCCCAGAGTAAAAGTGAAGCTGCTCTGGAGGAAGCAGAAGTGGGGGGCCTGAAACCTGCCACAAGCATCTTACTTTACCATCATGGTGACACCTAAGGAGACTTCCTTACAACAACTAGAAATCTTCAGAACACAGTTTGGAAACCACTGCCCTAGACAACAGTACGACCTGAATGGCATTCTGTTCTGTACCTCTACCCAACACGTCGGTGTTCAGTTGATAATGAGCATTCTTAGGAATACTCAGAGAGTGCAAGAAGATGGACATATCTTTGCCCCCAAGATTAGTTATATGGGCTGAAAGTAATATCAAAGAGACCTAGAATAATAGCCCTCTAACCACAAATAGACTTCCAGTGATTCCTGAATGATACAGCCACAGAGCAATTTGTATGTTACACTGACAAACCCCCTTATTCAACTTCTTCCACAAACACCGGATGCTCTAGTGGTACTTAAGATGCATGACCTTGAAGTCTTGATCCTCCTTGAATACAGTGAACACCAAGTATTGAAGCTGATGTTAAAGTCGATGCCTCATTGAGGCAGTATTAGACCAGCTGTACATTGGACCTCCCATTCTCAGCTATGGTACTCTACTTCGTGTGCAAGGGATAACCATAAACTATGAAAGCAGAATTCAGAGACTGGCAACATTACCGAAAAGGGCACCTGATGATGATTCATCTTCTCAAACTACGTCACTATCACTCAGCCATTGGCAGTTACACTACTGCTTGGTTTTTATTCCGTTTAACTGCTGTTTCCAGAATAAAGAAGCAAATAACCTCTGAAAAACTGCTAAAACAATTCCTCCATCACTGGCACATCTGCCTGTTCTGCTCAGAAATTAGTACTCAGCTCTACATGTAATACCTGATCCACAAGAGACAATCTCTGAACACCCTTTTCTTGTGTGTGTAATTTAAAATGTGGCCATTGTAAAAATTTTCTTCCAGCCAATGAGAGAGTTTAAGATGAATCTTTTGATGTCTGATACCATCAGTTGTTGATGTTAATGATATTTAGAGGTAGGCCTTTGGATCAGGCCTTGATAGCTTACTTGGTGGGCATCTCAAATTCCGTATCTACCTTTTTGCTGGAAATGTAGACTAACGTGAAAGGAAATCTATAAAGCCTGCAGCTAAAGAGTTTTAGCAATAGGCTCAAGCTTCTTGAGTCTTCCCAATGTCACAAGACCACAGTCCCTTGTCCTTGTGGATGTTTCCATGGAATTTCATCTGTTGTTTTAACTGAATCACAGTGGCTGACTTCATTTCTTGTCATGAAGTACTCTCAGGCATTAAGACAACTTGTCTGTTCAGGAGGGATTTGATTCATGAATTCCCAGACCAGATCATGTAGAACAAGTAGACTTTAATCCATGCCCTGAGAAAAAAATCTTATTTCTTCAGAATTGACTCAAGGGCCAGCTGTCCTCAACTACTTTAATGAATGCACTGGTTAAAAGTTGGGAATGTTTATATCTTTGTCTCTTATCCTCTACACTAATTGTGATTATGTGACTCAGTGTACAAATCATCAAACAAAGCCTAAGTGGTTATTCTATACTGCTCATTTTCAACAAAATCTGATGACTAGCCTGCTTGTGTATATACAACTATTATTTGTAAAGAAGAAATTGTCTACAAACTCGGTTTTTTCACTACCTTCATAATGTCAACTCGATTTTCTTTTTCTCCTGGACTTGACCGGAAGATACATTGATCTATCACTGCCAGTCATTTCCTTTAACCCTGTTAAAATGAGAGACTTAAAAAGGTAAAGATGATCATCTGTTCAAGAGTCTAATGTATGCTGTGTATAAGAATTGATGGTGGAAAAAGCCTAAAACTCAAACCTAGTAACTGTCTCCATGCCTCAGATCTCATCTTGCAGCAGTACCATTCAACCAGTCTGAGGCCTTGACTTGTTGATAAGATGTTTCTCAGAGATGAGCTGAATTACAGAAGATGGAGACTTGATTACCAAAGAAAGTAGGGCCAACCTTGATGAACCTGGCTCTCCCAACCCTATCACTCCCAGATGTAGCATAGACTCCTAAACAGAACCTCAAGTCTGGATTTAAGAGATACCCTTCTCCTGAGCTGAAAGTTCTTGGACAGATCAGCAGGAAAGTGAAAGTTGCTATACCTGACTGGCCCTTTAAGATCAGAAAATTGTATCTAGAGTAAACCGTATGGATTAACCCTGGAATACTCAGGGTTAAAGCTAATTTACAGAACTTCAACGTTAAACTGCCTGTTTTTCCAGATCTTAGCCTGGCTACTGATATGACTGGCCCTGCTGAAGTTACCTTACTTACTTGTCTATTTACCTGATTCAGCCATTGCCTGCCTTTCTGACATATTGCTGCAATCTGACACTGTCCTTCAGAAGACTACAGCTGATCTCGGCTATCTTATATCCGTTTCCACCAAGAAGTTTTGAACAGAAGCAACCTGTACTTCTGTAGTCTCCAGGACTTGATGTTCACAACAGGAAGGAGCATGCTACATACTCCTTGACCAGCAGCTTTTTTTTTTTTTAACTGCAGAGTAAGTCTCTATGCCTATATATATTAGATCATCATTTTCAGCACTTGGGACCTTCTCTGCCAGATCTGAAGGAGCAGAGCAGATTGAAAGCACTGTCCATTCCTCCATTCTATGGTCATACGGAGATGAATCTGATTTACAGTATTCACAGAAACGTACCAGTTCAACTTGGCAAAAGACTTAAAGGAACATAAAACTTTTACACTGAACTTAAAATTTACCACTGACTTGAGGAAGTCTCACAGAACTCTTTGCCAGTGGGAGGCTGGTTGTCCTGTTTCATGTCAGCAAGACAGTTGGGCTCTCAGGCTCATGCCGACTGAGTTTACTTACATTGAAACTCTTGTATCATCCAGATATGCTATTGGACATGATTATTCCATTCAGATGGATTACAAGCCTCCTGAGTAGAAGACAAACTTACTACTCATGATTTTTTCGAGAATACTTTTATCATCAAGGAAGGAACAATGCCAGTGGTTACCATTCAACTTTATGAGCACAGATTAAACTTTTTCAGTATCTGGTCTTACCACTGACATCAGTTGTTTTTGATTGACCAGCCTCCATTCCATTCCTTTGTAACGACTCCCTGATGTTTCTTCGAACCCCTTCTCCCTTTCTTCAGTCCACATGGTTCAGTCTGACCTAATCTTAGGTTTCATGGATGGACACGTAATTCAGACCTGATCAATCAGCACAGTCCATCTCCTTGACCATAGTGATTGATGCAGGATTGGTCATGTGATTCAAGTTGGTCCAGTGATTCTCAACCCTAAGAGTTTTAGTGAACTACGGAAGAGAAGCTCTTTACTGAGAATGCTTAGCTCTGTAGGATGAAAAGCTCAAACCAACAGGGCCCAACATATCAAATGAGCCAGTCGGAGAATGAAGCCAGTATAGAGGAAAATGGAGCCAAATGATGGAGAGACTTGAGTCCTGATGACAACGTTTGTGCCCCTGGATCAAACCGTGCCTGAAGCTAGTATATCCCCTGGACTTTTCAGTTATGTGAATCAATAAATACCCTTCTTTGCTTAAGTTACTTTGAGTTGGGTTTCTGTTACTTGAAATTGAGTCCTAAGATACTTGTCTACCAATATCAGAATCTTTATTAAACTAGAGGTCAAGGCCACACTGATATTATTTTCCAGTCCAGAAGATAGAGTGGAACAAGAGCTGACATGTTTAAGTTACTGCAGAAGCATAAAAATTAATTACATGGTAGAAAAATATAGTAAAAAATCTAAATGCTTATCAGCAAAGAATTTGTTATAACCACTATAAAACACCTGGTTCAACCATATAAGGACATTTACATGTCTGTTGTAAAGAATAAAATACACTTATTACATATGGGCATGGAAAAATGGCCATAATTTATTAAGTGAAACAAACCATTGCTAGAAAAATGTGTAGTATGAACTCATCTAGGAATTTATGTTCATAATGCAAAGTCTCAGTGTAGATTACATGACTTTCAACTTTATACATTTCTGTACTTGAATATTTTACACTACTCACATTTAAACTTATTTCAAAATAAAGAATTTTAAAAATTAAATATAATGCTTACTGTTCAACC EMBV3_11159 GTGCCAAACAAAGAGAAGTTAGTGTGCTGGGTTGTAAGTAACTGGAACCCTGAGCATGCC Gene GeneID:282853|FUT9:NM_174735:2_cdna Constitutive 0 NULL GeneID:282853 9 GENE FUT9 NULL fucosyltransferase 9 (alpha (1,3) fucosyltransferase) EMBV3_25823 TGCTCGCCTACATATCCCAGGTACCCACACAGATGTCCTTCCTCTTCCGCCTCATCAATA Gene GeneID:532834|TRPC4AP:XM_002692447:466_cdna Constitutive 0 NULL GeneID:532834 13 GENE TRPC4AP NULL transient receptor potential cation channel, subfamily C, member 4 associated protein EMBV3_30462 GATGCAGTTGCTGTCCGAGATAGAGGAACACCTGAACTGTACCATTTCTCAGGTTGAGCC Gene GeneID:510816|DDX1:NM_001075468:105_cdna Constitutive 0 NULL GeneID:510816 11 GENE DDX1 MGC139331 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 EMBV3_29146 AGCCAGGCCGAGGGCAGATCATTAAGGTGGATGCGCCATGGTTGAAACACTTCGTTATCA Gene GeneID:615334|DAO:XM_002694540:492_cdna Constitutive 0 NULL GeneID:615334 17 GENE DAO NULL D-amino-acid oxidase EMBV3_22742 AGGCAAGCCCATGCCAGCTGTGTCCAACGGGACGTTGCCACAATGCAGTTCTGCGCCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13568 CATATGTTGAAGGATGACTGGGCGGTGTGTCCACATTGTGACTTCCCTGCTCTGTACTCA Gene GeneID:533633|WDR19:XM_002688203:70_cdna Constitutive 1 NULL GeneID:533633 6 GENE WDR19 NULL WD repeat domain 19 EMBV3_24403 GCCTCTCCAGCGCCTTCCTGTACCTCACCACCACTTCGCCATTGTACAGGAATGACTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38350 GGATGCCTCCGGGCCCCACGACTCCTCTGGGTGCCACGTACTGGGGCCTCTTCCACAATA Variant GeneID:613919|GGT6:NM_001105434:174_cdna 148^464 1 EMBV3_09463 GeneID:613919 19 GENE GGT6 MGC151749 gamma-glutamyltransferase 6 EMBV3_40894 AGGTGTTCAGTTTTAGAGATAGGAAGAGTTCACCAAGAAGTCAGCGGACCTGTAACTGAC Gene GeneID:785266|THAP10:NM_001080741:284_cdna Constitutive 0 NULL GeneID:785266 10 GENE THAP10 NULL THAP domain containing 10 EMBV3_11356 CATCTGATAGAATGCCTGATGAACTATGGACAGAGGTTCGTTACATTGTACAGGAGACAG Gene BVV0102_057907 + 1 EMBV3_25754 GK000001.2:109793740-109821735 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029913 TCONS_00056175 TCONS_00187209 TCONS_00250571 TCONS_00011179 TCONS_00063565 TCONS_00131163 TCONS_00187531 TCONS_00031707 TCONS_00220694 10 XLOC_016168 XLOC_033978 XLOC_113257 XLOC_153514 XLOC_006730 XLOC_038292 XLOC_079868 XLOC_113576 XLOC_017954 XLOC_134011 Coding TCONS_00250571 XLOC_153514 NonCoding NonCoding - X:42149252-42150324 - TSS187792 1072 2 TCONS_00250571_2 72 0.998134328358209 1 0 0 2.93515809090232e-06 0 0 4.60558556696914e-06 0 0 0 0 3.83814493347743e-06 0 1.66776396838784e-06 0 1.31641845509755e-05 6.53810936032908e-07 1.23188112013123e-05 0 0.0059866563766667 0 8.856862846693e-06 2.57440136578403e-07 0.000107006674287432 1.7115755026956e-05 2.64435297952886e-05 0 1.64306614491543e-06 0 3.13602006021184e-05 4.11686306176024e-05 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 690 88.80 0.472014925373134 0 noncoding ATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCAGAAATAGATGTTTATCTGGAACTCTCTTGCTTTGTGATGATCCAGCGGATGTTGCCAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAAACCAGCTTGAATATCAGGAAGTTCACTGTTCACATATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCGGTAGTTTGAGCATTCTTTGGCATTGGAATGAAAACTGACATTTTCCAGTCTTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCTTCTTTCAGGATTTGAAATAACTCATCTGGAATTCCATCACCTCCACTAGCTTTGTTCGTAGTGGTGCTTTCTAAGGACCTCTTGACTTCACATTCCAGGATGTCTGGCTCTAGGTCAGTGATCACACCATCGTGATCATCTGGGTCGTGAAGATCTTTTTTTTGCATAGTTCTTCTGTATATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTGTCCTTTATCGAGTCCATCTTTGCATGAAATGTTCCTTTGATATCTCTGATTTTCTTGAAGAGATCTCTAGTCTTTCCCATTCTGTTATTTTCCTCTATTTCTTTGCATTTTTCGCTGAAGAAGGCTTTCTTATCTCTTCTTGCTATTTTTTGGAACTCTGCATTCAGATGTTTATATCTTTCCTTTTCTCCTTTGCTTTTCGCTTCTCTTCTTCTCACAGCTATTTGTAAGGCCTCCCCAGACAGCCATTTTGTTTTTTTGTTTTTCTTTTCCATGGGGATGGTCTTGATTCCTGTCTCCTGTACAATGTCACGAACCTCATTCCATAGCTCATCAGGCATTCTATCAGATCTAGGCTTCTGCTGTGTTACTGGTTGGGGCATAGAGTTGCATTACTGTGATATTGAATGGTTTGCCTTGGAAACAAACAGAGATCATTCTGTCGTTTTTGAGATTGCATCCAAGTACTGCATTTCGGACTCTTTTGTT TCONS_00246921 . 5' 18228 TCONS_00246921 . 5' 18228 EMBV3_17252 TCAATTCCTGGCTTTCTCATCCCAGGCCGAATGGAGGTGTAAATTGAGAATCAGGATGGC Gene GeneID:788201|LOC788201:XM_002690894:36_cdna Constitutive 0 NULL GeneID:788201 10 GENE LOC788201 NULL hypothetical LOC788201 EMBV3_13028 GCAAGTGCACATTCTGGAACTGCCCGTTGAGGGCCACTACATCCTTTACTGCGAAGGCCA Gene GeneID:618559|OBP2B:XM_002691611:248_cdna Constitutive 0 NULL GeneID:618559 11 GENE OBP2B NULL odorant binding protein 2B EMBV3_21182 GGCTTGTTTTTTTGGTGGTTGGGCAGGTTTCCAAGAGACAGCAAAATGCTCTTTAGGCCT Gene BVV0102_110533 - 1 EMBV3_30525 GK000013.2:51809476-51837800 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03120 GTTTGGAAGACCTTAAATGTAGTCTAATGGACCGGCTTTGGTTTATCCAACCACGGGAGG Gene GeneID:538709|CLDN12:NM_001076123:13_cdna UTR3_Alt 1 NULL GeneID:538709 4 GENE CLDN12 MGC139567 claudin 12 EMBV3_31578 AGGAAAGTTAAGAAAGATGAATTCCAACTCTGCTTCATCACTATCCATGTGACTTGGACA Gene GeneID:504970|TMEM220:XM_002695809:149_cdna Constitutive 1 NULL GeneID:504970 19 GENE TMEM220 NULL transmembrane protein 220 EMBV3_09885 GACGTGTGCACCAGAGATGCTACTAGGGAAGACACGACTTCAGCCTTTCTCTCTGCTTGT Gene GeneID:528151|DHX33:NM_001034563:129_cdna UTR3_Alt 2 NULL GeneID:528151 19 GENE DHX33 MGC127095 DEAH (Asp-Glu-Ala-His) box polypeptide 33 EMBV3_42440 GGTCTCTGACATTTTAGACTCCTCTAGGAGACCGCAAAGAATGTGCAACAGACAGTGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02125 CAGTGAGCTCTCTGAGGAGCAGGCCTTTCATGTCAGCTACCTGGATATTGAGGAGTTGAG Gene GeneID:514674|TARBP2:NM_001075678:36_cdna Constitutive 1 NULL GeneID:514674 5 GENE TARBP2 MGC139801 TAR (HIV-1) RNA binding protein 2 EMBV3_12357 CAGTGGCTGGAGGGCCAGGTGGACGTGGCCAGTGCCAGAGAGTTCCAGATTGTGTTTGAA Gene GeneID:515379|MAMDC4:NM_001143873:35_cdna Constitutive 0 NULL GeneID:515379 11 GENE MAMDC4 NULL MAM domain containing 4 EMBV3_31427 CTCTGGATGATGGTGAATACAACCCCACAGATGATAGGCCTTCCAGGGCTGACCAATTTG Gene GeneID:505599|POLR2H:XM_002684872:70_cdna Constitutive 0 NULL GeneID:505599 1 GENE POLR2H MGC140013 polymerase (RNA) II (DNA directed) polypeptide H EMBV3_19696 TCCTGGGAAAATGTGAAACCTGGAGCCTTGTGTAAAAGCATGAGTTGGGCTTGGCTGCAG Gene BVV0102_130444 + 0 NULL GK000022.2:53071260-53073617 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35630 TTCAAGAAGGCTGTGCGTTTTCCGATGAGATCACTGTCCACTCACTGACTGTGTCCACTG Gene BVT0102_060907 - 0 NULL GK000021.2:28046519-28220542 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118979 TCONS_00118978 1 XLOC_072791 NonCoding TCONS_00118979 XLOC_072791 NonCoding NonCoding - 21:28109908-28111308 - TSS89225 1051 1 TCONS_00118979_3 68 0.104662226450999 2 0.250178699070765 2.32314208377197e-05 0.000583210843175708 0.000179091375423446 3.95059456899683e-05 9.39520679050798e-06 0 0.000359710170979207 0 0.000157652546067077 4.54221291882539e-06 1.30686168433032e-05 0.000483106896338207 0 1.41091863528278e-05 3.62028858519442e-11 4.28230181924785e-05 0 1.60121876166558e-10 5.79186894964103e-05 0.000122679121628364 0 1.4121157052565e-06 1.74577556491502e-06 3.36587363439591e-11 0.000125251558650367 2.68142570538989e-05 0.0001194884271488 9.13908605185008e-05 1.31862641348453e-05 0 XR_231032.1 LOC101902570 PREDICTED: Bos taurus uncharacterized LOC101902570 (LOC101902570), 1e-138 497 86.67 0.366317792578497 0 noncoding 0 0 0 0 -0.0442991470163434 0.746620907415723 -0.0663969214619319 0.184437821949585 AGGAGAGGGAGGAGGTTTGGGAGGGACAAGAAAGGGGAGAAGAAGCAAGGGGACAGGAGCGGAGAGGCGGGAGGAGAAGAAAGAAACTTAAAGGGAAATGAGAGAGAGCGAGGGTTGGGAAGGGCAGGAGGGGGAGGGGAGAAGCGGGAGGAAGCTGGAGGTCGCTGGCCGCACCCCTGCCTCTTCCCCGAGCCCTAGGCTAGCCCTGCAGGGAAGTATGAAATGAATGAACGGTGTACCTGCCTTCCAGGTCTAAGGGGTGCAGGGTACAGGCTGTACCACCCTCCTCGTGTCTTGACCCCCGTCCCCCGCCTGGGGTCAGCCAGCAGCTGTCCCGAACAGTTCCTACACCGCTCCTCCCACTAAGTTGGGACCCTGGACCTTCAAGAAGGCTGTGCGTTTTCCGATGAGATCACTGTCCACTCACTGACTGTGTCCACTGGGGGGACTTGAGCCCTGGGACCTCATGGATCGAAGAGCGGGACAGAAAGGAGATCCTGGTAAGGAATACTGAACTAATAAGCCACCACCAACCGGAAGAGTTCGGGAAAGGTCAAAAGGAGACACCGCGAGTCCGTCCACTTCCCAGAATCCCTCTGGCTAGCATCCATCTTGGCTGAGTGATGCGTGTGCCACCAGGAAAGACTCTGAATTACAACAATTGGTCAAAGACAACCCGGAAACTAATCCCATCACCATAAAACCCGAGACTGTGAGTCACATGGCAGAGCAGTTCTCCTGAGTTCCCTTACCCTACTGCTCTCAATACAATCTCTTGCTATGTCAGCACATGTGTCTCCTTGGACAATTCATTTCCGAGTGTTAGACAAGAGCCCAGTTTCGGGCCCTGGAAGGGGTCCCCCTTCCTGCAACATATTGACCCCCTTTCTCCCTCCTCACTCCCACTTCCAAGGTAGCCACTGTTCATGGCCAAGGAGGTACAGCTGGATCAATCGGCATTCATGTGTTTTAATGTGCTTGGTGTAGAAATGAGATCAGGATAGTATAAGACCTACTGGGCAGTGACTGGTCCCCAAAAGCCAAGCAGCTC TCONS_00120879 r 5' 42691 TCONS_00120879 r 5' 42691 EMBV3_24340 CCTTTGACATCCACACCTATGGGGACCAGGTGGTCTCCCGGTTCAGCCAGCTCAACCAGT Gene GeneID:767978|NCAPH2:NM_001077043:71_cdna Constitutive 0 NULL GeneID:767978 5 GENE NCAPH2 MGC127230 non-SMC condensin II complex, subunit H2 EMBV3_18387 ATTCATGAAATTAACCAACAGCCAATCTATTAACAAGCTTGGCACTGACACGGGCTGCTG Gene GeneID:512704|REEP3:NM_001101961:13_cdna UTR3_Alt 2 NULL GeneID:512704 28 GENE REEP3 MGC165949 receptor accessory protein 3 EMBV3_20771 AAGAATTCAGGACTGCCCAGCACGAGAAATGCTTCGCAATGTCCATGACTCCCATGACTC Gene GeneID:512171|ADAMTS1:NM_001101080:16_cdna Constitutive 0 NULL GeneID:512171 1 GENE ADAMTS1 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 1 EMBV3_20665 AGGCTACAACATTGAGCAAATGGCAAAGCGGATGTAGCCCAGCGGATGCTGGCCACTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32004 GAGCACTGCCTGGTAGCCAATCACGCCAAGATCTGTTCCACTGGGCCTGCCTCAATGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20944 GGTTGGAAATGTTATTCTGTGCTTCTGGTTTTGTGAAGCCGCAGCCAACTGGGTTCCTGG Gene GeneID:613634|LSM4:NM_001035436:113_cdna Constitutive 0 NULL GeneID:613634 7 GENE LSM4 MGC128718 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_27180 AGGTCATTCCAAATGCTCTGTGTGGGATTTGTCTGAAGGGTAAGGAGTCCAGCAGGAGAG Gene GeneID:507648|PHF10:NM_001038052:9_cdna Constitutive 0 NULL GeneID:507648 9 GENE PHF10 MGC134457 PHD finger protein 10 EMBV3_27983 GGGCTACCGAACTTTTGGATAATCAATCTTCCATCACACAGCAGCCCTGAACACCAGGAG Gene GeneID:100295394|LOC100295394:XM_002692589:317_cdna Constitutive 0 NULL GeneID:100295394 14 GENE LOC100295394 NULL similar to zinc finger protein 582 EMBV3_32050 CATGACTGAAAACAGAGAGGCAGGGATTGTTTTTGGTTCTCTGCCCATATACAGGGTACC Gene GeneID:783230|WDR64:XM_002693956:140_cdna Constitutive 0 NULL GeneID:783230 16 GENE WDR64 NULL WD repeat domain 64 EMBV3_07438 GCAGACTAACTGAATGCCAGTACTTCCCTGGTGGTCCAGTGTTTAAGATTTCACCCTCCG Gene BVV0102_118145 + 0 NULL GK000017.2:71593892-71606574 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22020 GCCTGCTGTGATACTTAAACCAGTTGGGAACTCACTCAAATTGTTGGGCTTCTTACACTG Gene BVT0102_078498 + 0 NULL GK000008.2:46907761-47013618 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00231275 1 XLOC_140764 NonCoding TCONS_00231275 XLOC_140764 NonCoding NonCoding - 8:47007351-47010163 - TSS172779 2812 3 TCONS_00231275_6 77 1 0 4.35458414081263e-05 0.00017509720198139 0.000115181417722259 0 4.91611465032636e-05 3.81620213158708e-06 2.07386670582313e-06 1.68270630326724e-05 1.12235128040592e-05 0 0 0 4.0814933989715e-06 0 3.48947581013859e-06 0 0 0 0.00010455478243894 0.000156001945363703 4.31824536955808e-06 0.000139863376736413 3.26246341519294e-07 0 0.000202039608049393 0.000112747523323082 0.0001333519280697 0 0 0 NM_001192435.1 L1CAM Bos taurus L1 cell adhesion molecule (L1CAM), mRNA. 2e-08 66.2 85.71 0.0195590327169275 XM_005252217.1 TRPM3 PREDICTED: Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant X1, 0.0 2102 76.86 0.996088193456614 0 noncoding 0 0 0 0 -0.795577155380928 0.182561177786266 -0.105304479068993 0.0806420143875754 AATATGGTCCTGGTTGGCTCTGACTCAGAGGTCCCAAACTATTGCCTCCAGGTTTGAAAGCTGCTGGCAGACACGTTTGGCTAGCACAATGTTTGCAAATCTGAATGTGAATGTCTTTGTAGCAGACACGTGCTCTCTCAAGCCCTGTAAACCCTACTTCTTCCTGTTGTTTTTCCCAGCCCAACTGCCGCATTTGTGTTCTGGATCCAGCCGCTTCACGTATTTGTGTTTGCAACCCCACAATCTAGAGGCAGATGGCTGCTGCTGCTGATACGTGATAAGCTGGGGTAAAGATGTGACTGATTCTTTTGGGATTCAGACAGGCAAAGTATTGATGAGGTTGATGCAAACACCAGTGAAGTTAGGAGCATGGGGTGAAGTTGCGGGGAGGAAGCTAAGTCAGTGGGAAGATGAGGGCTGGACAAAGTCTGAAGGCTTGCAGCCGCTGGTTCAGTTTCCTCTGCCAGGGTCCAGAGGGTATGGAGGTGATAGGAGATAAAGTCAACTGGTCTGGCAGAAAAAAAAATAAAACCTTGTGCTGGGCCAAGAGCAAGGAAGAAAGTTAAGGGGGTGAAGAAGGCTGTGTATCCAGGCCCAAGGCTGAACCTCTCTCTGCATCCCCCAGCCCTCAGCAGCCCCCCAGCTCCAGAGGAAGGCCTAGGTCAAGGTTGGCACTGACGCTCTTCAGAAAACTATGGCCTTCTAGCCATACATATTCTTTTCACTTCCCAGCACACAAACTTTGTGTAAACGGGCAATGGCTTGAAGGTTTAATGGGGCTGGGAGAGCAGGTCAGTTAGGGAAGGGAAAATTTACCTCACTCTTACTGCCACCTGGATTACTTGGCCACTGAATTCCTCTTAGACACATGTAGAAATGGTCACGTCTTGATTTCATTAACAGTGATCAGTGCAAGGAATTCATCAGAGAAAAGGTAACGCAACCAACTTCTCAAATGAAGTACAAAAAAAAAAAAAAAAAAAAAATCCTGTTTTCCTTAAAATCAGAACCAACTGCTCCTTTGATTGACTCCAATCTGAGAAAGAGACTGTTTGACAGGTAAAAAGAAAGCCTAGGCCAGTGCAGGCTGACAGAAAAGTTCTCTTTACTCTTTGAGGAGCCATCATTTATAAGACTATGCAAGTTTCATCCTCCCTTGTTCAGATGTTGAATGGCTCTTCACAATGAAATGGTGACTTCCTTGAAGGGCAGACTCTTCAGAGTCACCCTGTGCTCAATGAGACACGCAGTCACCCATCTCTCACCCTCCCCCAGGCCAGGCTCACACACAATGTGAGAAAAGCCCCAAGGTAGGAGCTTTTCCTACCTATTGTCCACTGGATTCATCCATACTGATATGTGGATTTCTACACTGTCTTGAATGGACTCCTCACTCTCGTCTCTGGTTTAGCAACTTGCACCCAATGGCCCTAAAGACTCAGAAATATGTCCTTCATATATCACAGATGCACCAACACTAGAGCTTGGTAAACCCAAGTGGTGTTGGCTAGCTATCTCCAGGTTACATAGCTATAAGGCCCTGCAGTTAATACTTTATTCCATATTATTTGTTCAGAGCTTAAAAAAATAGTAAAAAATCCTTGGTTACTTTTTTGTTTTTAATTTTTTTAAATTGGACATAATCCCCAAACAGTGTAAGAAGCCCAACAATTTGAGTGAGTTCCCAACTGGTTTAAGTATCACAGCAGGCAACAGTAAAACATTAAGTGCCTTTAAAAAGTTAAAATAAATGCATAAAGCAGTGCATGCATTTTATCACCACAAAAATTAAGACTGGATTTGGAGAGGGATTACTTCATTTAAGTCACATTAATATTGTTAAAGAATAGTGAGCTATAATGCAGTATTGCAAGTATATAGCCACCTACACACTAGCATCACTTTATCGAGAAACAAACATATTAGTGTTACTACATGAACATACTTAAAATACTGTACACTGCTTCCACACTGGGTTAGCAGATGTAAACAAACAGCTAATTCAACTGGAGCTTAAGATATTATTTTCAATTTGTCATATAGTTTTTGCATAACATGCCAGTTCATCTTTCACAAAACCGTAACTTGCCTACCACAGCTTGCAGGGCTGGTCAGAGGATGCACATCAGCTCATACAAATATTTTACAATGGTCTATGGGAATGTGGAAAACATGAAGCAGATCAGGAACAAAAGTACCCATTTCATGAGGATGCTAAATAACATGGAGTTGGGAACATCATTAATCCTTGCAACATGTGCTTCTTTATTGAATGTTACAGATTTGTAAAGGATTATAAAGTTCTCCTGTAACGTTCATTAATACAACCACATGCTACAACTATGCTGAGTTAAATACGGGTTACATATATGTTTACATGTGTTTTATAATACAGCATTGCCCCACACACATTGAACAGTATAGCTTATAGATATAGCATGATTGATGACTGGATAATATATAATTACAGAAGTTAAACAGCCCAAACGTTCAGAAAGATTAGACTGTATAGCCTTAGAAAGTGGAAAAAATGTACTATCCAGTTATCTACCATAATATTATCTATAGAAACCATCTTTTAGAATACATTTGAAACATTCAGAAGAAACACATTTTGTGTTTCTTACAAGTACATTTTTATTTGATAATTCTGATATCTATATATATATATATATATTTTTTTTTTTTTTAAGGGGGAACTTTCAAGTGCTACATAATATCCTAGACCTGGAAGCTTAGACTTAAAAAAAAAATCCAGTTCTGTAAAGTGCTGCATTCTGACCCCTAATATACCTTCTGGCTGGAGAAACAA TCONS_00227548 TCONS_00227549 . 3' 93 TCONS_00227548 TCONS_00227549 . 3' 2904 EMBV3_15989 AGGCTACCTGGCCTTTTATAGAGGACTCTTTGCCCAGCTCATCCGGCAGATACCAAACAC Gene GeneID:533794|SLC25A33:NM_001076002:82_cdna Constitutive 1 NULL GeneID:533794 16 GENE SLC25A33 MGC139420 solute carrier family 25, member 33 EMBV3_37379 ATGCATGAGGAGTACGTCCCTCCTTAAAAGGACCCTGGAACAAATCATACTGTAGGAGGG Gene GeneID:615093|LOC615093:NM_001145428:201_cdna Constitutive 0 NULL GeneID:615093 6 GENE LOC615093 NULL hypothetical protein LOC615093 EMBV3_29075 TCATTTGTCCACTCAGGAAATACAGGAAGCTACTCTCCCAACCCTCCCTCATGACTCCTG Gene BVT0102_107459 + 0 NULL GK000019.2:15308219-15378385 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08131 TTCCCGGTCCAATTCTGGGGGCGTACAAGACACTGAGATGGGTCCCTGCCGCAAACATCT Gene GeneID:404186|IGFBP6:NM_001040495:157_cdna Constitutive 0 NULL GeneID:404186 5 GENE IGFBP6 MGC134265 insulin-like growth factor binding protein 6 EMBV3_01025 GGCCGAACAGCAAAGAATGCAAACGACAGCTGCTACAGACAAATAAACACTCAAGGTGAC Gene GeneID:784116|LOC784116:XM_002707891:9_cdna Constitutive 0 NULL GeneID:784116 8 GENE LOC784116 NULL similar to ADAM 29 precursor (A disintegrin and metalloproteinase domain 29) (Cancer/testis antigen 73) (CT73) EMBV3_29271 TCTTCAGTGTTGCAGGTCGGCTTTCTCTAGTTGTGGCGACTGAGGACTACTCTCTAGCTG Gene BVV0101_025081 + 0 NULL GK000023.2:17168155-17256016 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05083 CCGGCCCCTAAAATGATTGAAGATGGTAAAATCCACACAATGGAGCACATGATCAGCCCC Gene GeneID:540831|RBM47:XM_002688207:82_cdna UTR3_Alt 2 NULL GeneID:540831 6 GENE RBM47 NULL RNA binding motif protein 47 EMBV3_09756 GGCCACACCAAACTAGATTCTCTAAAACCATCATGATTAGGGCTGGCATCTGAAAGTTGC Gene BVT0102_020975 - 1 EMBV3_05175 GK000008.2:39618683-39631341 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23597 GCCTTGTATGCTTCTGTTTGCATGTAATCCTAGTCTGGTTGTTATGGCAGATTGAAACCC Gene GeneID:523885|TMEM135:NM_001035348:20_cdna Constitutive 0 NULL GeneID:523885 29 GENE TMEM135 MGC127525 transmembrane protein 135 EMBV3_40410 ATGGAGAGTGGGCGCGTGAGCAGCATCCGCTTTGAGAACATGAACGTCATCTGTGGGACT Gene GeneID:100140272|LOC100140272:XM_002695133:654_cdna Constitutive 0 NULL GeneID:100140272 18 GENE LOC100140272 NULL hypothetical protein LOC100140272 EMBV3_01966 CTGTTCTACAGACTGAAAATCATGTTGGACTGCTACAGTTGGTGTGGATAGAAACTATGG Gene GeneID:510670|C10orf107:NM_001105618:10_cdna Constitutive 1 NULL GeneID:510670 28 GENE C10orf107 MGC140402 chromosome 10 open reading frame 107 EMBV3_34997 TGCCTGGATGACATTGGCCATGGGATCAAGGAGAGCACCCCGGATCCCCGAACCCGTGCA Variant GeneID:529835|ABI3:NM_001083454:117_cdna 471^556 1 EMBV3_38990 GeneID:529835 19 GENE ABI3 MGC138093 ABI family, member 3 EMBV3_19225 TATAGAATGTACTCTTACGTAACGAAGGAGGGTTATGATCACAGCTACTACTTTATTGCA Variant GeneID:535653|ESD:NM_001076065:163_cdna 498^884 3 EMBV3_42754 GeneID:535653 12 GENE ESD MGC139609 esterase D/formylglutathione hydrolase EMBV3_25388 CAGAAGATACCAGAAATGCCTGCCGATGTTGTGGGCGCCCTTCTGTTTCTGGAGGATTAT Gene GeneID:508040|LOC508040:XM_002692622:67_cdna Constitutive 0 NULL GeneID:508040 14 GENE LOC508040 NULL similar to Strumpellin EMBV3_27940 GGAGTATACCTTAGCTCTGCTGCTACCCAAAGCTCACATTCAAGTGCAACGGCCTTGGTG Gene GeneID:100336881|LOC100336881:XM_002688583:296_cdna Constitutive 0 NULL GeneID:100336881 7 GENE LOC100336881 NULL olfactory receptor, family 7, subfamily A, member 17-like EMBV3_34521 TGTGGATAGTGGCTACCCTGGTTTAGATAATCCCGAGCCGGGGGAAGGTGGAGAAGAAAA Gene GeneID:286843|ADAM1:XM_002694593:683_cdna Constitutive 0 NULL GeneID:286843 17 GENE ADAM1 NULL a disintegrin and metalloproteinase domain 1 EMBV3_28200 GACTCTGGCAAATTCACCTGCAAAGTCCCTGGCCTCTACTACTTTGTCTTCCACACGTCG Gene GeneID:509968|C1QC:XM_002685719:423_cdna Constitutive 0 NULL GeneID:509968 2 GENE C1QC NULL complement component 1, q subcomponent, C chain EMBV3_21840 CACTCTCCTTCGAGTTCCGTCACAAGGAGTCCAATAACTTCAGGTGAGGTCAGTTGAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04527 TCCACTGTGCACGGCTCCCAGCTCAGCCGCGTTGTTTTAGTTGTTGTTTTAACACGTATT Gene GeneID:508144|ZZEF1:XM_002695756:216_cdna Constitutive 0 NULL GeneID:508144 19 GENE ZZEF1 NULL zinc finger, ZZ-type with EF-hand domain 1 EMBV3_12444 TTCTTGTGGGCAGGAGTCCAATACCTCAGGATGAGGAGCTTACTCCCTCTTTAAGCTGCT Gene BVV0102_146880 - 0 NULL GK000013.2:53109441-53134601 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048995 1 XLOC_029126 NonCoding TCONS_00048995 XLOC_029126 NonCoding NonCoding - 13:53117092-53119187 - TSS36171 2095 3 TCONS_00048995_1 43 0.612410501193317 1 0 1.84006960309702e-06 0 2.20859766592077e-06 2.10158813449028e-06 5.72329130958856e-07 0 6.95907614930363e-07 5.38984549580277e-07 2.52308584129262e-06 2.65782798547295e-05 5.80430008901511e-06 2.86584730301857e-05 5.26467966726518e-06 1.71885547205838e-05 2.07983922158894e-05 0.00310121105894234 0.00074586006021282 0.00161053116862661 3.42287352128136e-06 2.60199358015585e-06 0 0.000508546661507214 0.000427055086019303 0.000925178515455501 3.89225537651647e-06 8.88391048332432e-06 6.03838804517514e-07 5.37089945375662e-05 2.28300207275483e-05 8.99112015742509e-05 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 3e-113 414 92.31 0.136038186157518 XM_005254272.1 PLA2G4F PREDICTED: Homo sapiens phospholipase A2, group IVF (PLA2G4F), 2e-06 59.0 79.10 0.0315035799522673 0 noncoding 1 1 1 1 0.0526185613197439 0.614408631063479 0.00875049430459632 0.853150459251676 CGTCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCTTACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTCGGAGAAGGAGTTAACCTAGAGCTCCAGTCAATAAAAACTCTTGGGTGTGACAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGACAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCTTCTAAAAACAGGTTCCTTAGAAAAGTTAGAAAACTATTAGTATAAGTATAATGGGCTAATTAGAAATTGTGTTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAACTAAAACCCACTACACCCTCACCCTGTAGGAATGTAACTTTATTTGGGTGGCATCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTTAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCTCTCTCTCTCACTCTGGCTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTCATCCTATTACTCTTTATATCTTTGATAAAATATTTAAATAAATAGGTCGCCGACGCCATCCCCGCTTCGAATACCCTGGATCAGCCGGGGCAGGACCCCGGCACTTTGCTTTGCTTCCTCTCAGCTGAGGATACAACTCTGAAGGATGCTGCCATCAGGACTCGTGGCAGAGCCCTGGGCACACCAGCCATTCAACATTTAAAAGTAAGTCTTGGAATGATGTTTCCTCACAGAGTTTTTGAGTGCTGAACAAGGGCAGCATATAAAGGTGATTTAGAGCACAAGCTGGAGTATCAGGCAGAGTTCAGTCCTGTATGACCTTATGCATGTTATTTATCCTTCCTGAGCCTCTGTTTCTTTATCTCAAAAATGGGGTTAAGAGGGCTCCTTCTGGGACTTGTGAGGGACAGATGGACAAAGGTAGGTAAAGGAACCTGCACAAGTTCCAGTAAATAAAGAGCACGCCCCACTATCCACTTATGGGAGGTGCTTGCTTCATGCTCTGAGTCCTGTGGGGCCTGATTTATCTCCCCTCACTCCATGTTCTCTATTCATGCCCCTCTGTGCCCTTGGCAGCAGGGCATAGAGGGCTGTCTCTTACTTGTCACAGGAAGATCCCAAGGCTGGTTCTGGATCAGCCAAGAAACTGCTTGCTGTCAATAGGGAAGCACCTGAATTCAACCCGAGCCAGAGTCCAAGAACAGCTCCTCCTAAAAGCTGTAGCCAAGCCCAGCTAAAGTGGATTCTCCACTTTGAAGTGATGTTTCTTAGACTTTGAGTAACATTCTTTCCAACCAGAGAAGAACCTTGTTAGAACAGGAGAAGCCACATCAGGGAGTCTCAGGATCACCTGCAGTCTTTCTCTTGCTGTTCCTGCTGGAAGGGGTTCACGTCCTTCCTTATTGGTTTCTACTTGTCTTCCTCCTGCTGGAGGACAGTGGGGTTCTTGTGGGCAGGAGTCCAATACCTCAGGATGAGGAGCTTACTCCCTCTTTAAGCTGCTCTTTTCACCAACACCCATACTGGTTTGGGGA TCONS_00045508 . 5' 7653 TCONS_00045508 . 5' 7653 EMBV3_19005 GTTCTGCCTTAGTGTTGGAGCCATTGAAAGATGGAAGATGTTTTGAAAGCCTTGCAAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22840 CCACCTGCTGCATCTCTAGCTGCTACCGCCCCTCCTGCTGTGTTTCCAGCTGTGGTTCCA Gene GeneID:787051|LOC787051:XM_002695981:337_cdna Constitutive 0 NULL GeneID:787051 19 GENE LOC787051 NULL similar to hair keratin cysteine rich protein EMBV3_25608 AGACCATGTTCAACGCCTGCCTCTACTTCAAGTCCTGCCACAGCTGCTACACCTACTACT Gene GeneID:521846|LOC521846:XM_002691707:69_cdna Constitutive 0 NULL GeneID:521846 11 GENE LOC521846 NULL similar to CG15216 CG15216-PA EMBV3_34214 AAAGCCAAAGCAGAAAGGTCGCAGCTCAACCGCGAGTCTGGTAAAGAGGAAGAGGAAGGT Gene GeneID:509913|WDR46:NM_001015564:98_cdna Constitutive 0 NULL GeneID:509913 23 GENE WDR46 C6orf11 WD repeat domain 46 EMBV3_36792 TGAGCAAGGCGGGCCCGGATACGCCCCCAGATATCAGTGAATGCTCCAGTCAGCCTTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04971 TCCTGTAGATGAGAAACCATACAAGCAGTGGGATTCGATAAACAAGTGGATGTGTCATAT Variant GeneID:537631|MAPK10:NM_001083728:25_cdna 572^670 1 EMBV3_37799 GeneID:537631 6 GENE MAPK10 NULL mitogen-activated protein kinase 10 EMBV3_03817 TTTGCACCCGTGCGACGTTATGCTCATGAAACGTTCTGGCGGCTTCGTGCAATGGATTCA Gene GeneID:788824|WRNIP1:NM_001103106:21_cdna Constitutive 0 NULL GeneID:788824 23 GENE WRNIP1 MGC148461 MGC159472 Werner helicase interacting protein 1 EMBV3_00288 CCAGGATATGGAGACTGTTCAATCACCAGGGACCTAAGGAAAGCTGGATTGCTGATTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06834 ATAAGAGGGGCTCCCAGTACTTCTCCCGTTCTCCTTCAGCAAACGAAAACAGCTTCCATG Gene GeneID:539601|FCHSD2:XM_002693439:82_cdna UTR3_Alt 2 NULL GeneID:539601 15 GENE FCHSD2 NULL FCH and double SH3 domains 2 EMBV3_18410 TTTCTCTACTACTGCCATTGCTGCGGAACTGTCCATCTGCACCCTGACACCATTCTCAGA Gene BVT0102_252889 - 1 EMBV3_40035 GK000029.2:102742-146960 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193797 TCONS_00047022 TCONS_00193796 2 XLOC_117595 XLOC_027159 NonCoding TCONS_00047022 XLOC_027159 NonCoding NonCoding - 13:11388788-11389433 - TSS34198 645 1 TCONS_00047022_3 108 1 0 0 0 0 0 0 0 0 0 0 9.56862032077527e-06 1.77456400843264e-05 0.000839499246189952 0 0 0 0 2.57399897477362e-05 0 0 0 0 4.02673055875444e-05 0.000106674958482574 0.00172065079037736 0 0 0 0.000236778707636003 0 0 XM_005214286.1 LOC101903895 PREDICTED: Bos taurus ankyrin repeat domain-containing protein 26-like (LOC101903895), transcript variant X1, mRNA. 1e-150 536 84.35 0.761240310077519 XM_005263936.1 ANKRD36 PREDICTED: Homo sapiens ankyrin repeat domain 36 (ANKRD36), 9e-25 118 70.93 0.441860465116279 0 noncoding GCTATGTTAAATATTTTTGTCTTATACATAGCTAATGAGAAATGTGAAAGCATGAGCAGTCATAGTGAAAAATATTCTTCTTCCTCATTTATTCATCATGTTCCATAGTTTAAAAAAAACGTCAAAAGGTCTATGCATTTCTATTTATTTCTGGCTGTATCCTTTCTCTACTACTGCCATCGCTGTGGAACTGTCCATCTGCACCCTGACACCATTTTCAGAAAGCATGGAGTTCATCAGCGTCTCGAGTGTCTGGTAGTGGTCAAGGCTAGAACACCCAGACTCAAGCAGTCATGTTTGCGTAGCTGTCACTTGGTGGGCGACTTAGTAATTTCTGTGTCATTGACTTTGTCACTAGTTTCTCTCTTGCCCTCAGGAAAAGCTCCAAACACCTGCATCAATGTGGGTCCTTCCAAAGTAGTTGGCCTTATCTCTTTACCACCTTACTCTGGCCCTTAGCTGTGCATCTAACCAGCCAGACTGTGTAGGATCCCACAGATTCGTTTCCTCACCTCTGGTCTTTGTATGTGCTTCTCCCCTCTGTCTCTTGTACTTCTTCCTGTCCTTCAGGTAGCTACTTCCATAGCACCTCCACCAAAAAGCTGGCAGCATTGACACAAAGCCGGCTGTCCCTTCTGAATGTTC TCONS_00041954 . 5' 2905 TCONS_00041954 . 5' 2905 EMBV3_25410 AGCTGGCCGAGCAGGCTGAGCGATACGACGGTTGAGACTGAGCTAAAGTTAATCTGTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20014 CTTCAGGTTGTCCTCTGCTGTTCAGTCTGCAATCTCAGTCTCTTGGAGGAGGAACATTGG Gene GeneID:282690|ATP5J:NM_174717:7_cdna Constitutive 0 NULL GeneID:282690 1 GENE ATP5J NULL ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 EMBV3_27231 TTGCAGCTCCCGGGGTCTTTCTTGTATGAGTTCTTTTGTTGTGTCACACGGGCTCCAGAA Gene BVT0102_033145 - 1 EMBV3_02915 GK000009.2:54751379-55015377 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00161 TAACGTCAGGATGACACTTGTCCCCGATTACACACACAAGGAAGTGGGTTCAGAGAGACC Gene GeneID:513034|CLDN19:NM_001101084:146_cdna UTR3_Alt 3 NULL GeneID:513034 3 GENE CLDN19 NULL claudin 19 EMBV3_43600 AAATGTAACAGATCGACTTGCCTGAGAATGAGAAGCGAACAAGCCTGAGCTCTCCTGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15361 TAAGAGGAGCCTTTAAAACAAATCATGGCAGTCACGCCCCTCCTAGCTCACACCCCTCTT Gene BVV0102_070649 + 0 NULL GK000022.2:10482652-10492109 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125946 TCONS_00125981 TCONS_00125975 TCONS_00127929 TCONS_00125952 TCONS_00127931 TCONS_00125970 TCONS_00127939 TCONS_00125948 TCONS_00127935 TCONS_00125960 TCONS_00127938 TCONS_00127934 TCONS_00183014 TCONS_00125976 TCONS_00127942 TCONS_00125943 TCONS_00127933 TCONS_00125978 TCONS_00127936 TCONS_00125966 TCONS_00125962 TCONS_00125964 TCONS_00125947 TCONS_00125980 TCONS_00127937 TCONS_00125967 TCONS_00125942 TCONS_00127930 TCONS_00125973 TCONS_00125972 TCONS_00125974 TCONS_00127940 TCONS_00125945 TCONS_00125959 TCONS_00125961 TCONS_00127941 TCONS_00125971 TCONS_00125963 TCONS_00125958 TCONS_00125968 TCONS_00127932 TCONS_00125965 TCONS_00125949 3 XLOC_077347 XLOC_077783 XLOC_111052 Coding TCONS_00127932 XLOC_077783 Coding Coding MLH1 22:10490165-10564380 j TSS95586 3438 1 TCONS_00127932_1 376 9 0.953795779772011 0.0043887901547159 0.00238390942258159 0.0035762285284195 0.00362297099935795 0.00290463911983412 0.00208590191602714 0.00350059247271572 0.00700523808870211 0.00570958853788161 0.000565826997592079 0.000109583890907793 0.000107843975430649 0.002714010251822 0.00108988891000138 0.000983507989632873 1.29170018011621e-34 1.01721687713299e-40 4.32024599557364e-15 0.00455511755615868 0.00351880857844088 0.000688448082752423 1.22974222898677e-68 8.7015724289671e-05 5.7796521075656e-23 0.00320418460025992 0.00205641378435251 0.0021683078732453 1.77676070549965e-27 3.25863526642827e-31 1.45859127822846e-24 XM_005222490.1 MLH1 PREDICTED: Bos taurus mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) (MLH1), transcript variant X1, mRNA. 0.0 2518 100.00 0.405759162303665 XM_005265161.1 MLH1 PREDICTED: Homo sapiens mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) (MLH1), transcript variant X1, mRNA. 0.0 1544 86.53 0.375509016870273 TCONS_00127932_1 sp|P40692|MLH1_HUMAN MLH1_HUMAN DNA mismatch repair protein Mlh1; 0.0 702 88.83 0.997340425531915 0 coding 1 1 1 0 -3.67000959507096 0.025004179331911 -0.300754754382983 0.0176908271753154 GCGTCGGTGGTTTTTAAAAGCTTGGCCAGGCATGGGCATGCGTAGGTGGGGTTAAGCAACACTGGGCATGTGTGAAGGCCTACGCTCACTGCAGAGTTCAGACTTTACTGCCAGGTCTTCCTGGCCCCTCTGGGGAAGCAGTTAAATCCACAGCGAGTGTGACATCCTCATCCACTGCTGGAAGTGGTGACAGAGTGTATGCCCACCAGATGGTCCGCACAGACTGCCGGGAACAGAAGCTCGATGCCTTCCTGCAGCCTGTGAGCAAGGCCCTGTCCAGTCAGCCCCAGGCTGTCGTCCCAGAGCACAGGACAGATGCTTCTAGCAGTGGGACCAGGCAGCAGGACGAGGAGATGCTTGAACTCCCAGCTCCTGCTGCAGTGGCTGCGAAGAGTCAGGCCTTAGAGGACGATGCAACAATGAGGGCTGCAGACCTGGCCGAGAAGAGAGGGCCCTCTTCCAGCCCCGAGAACCCCAGAAAGAGACCTCGGGAAGACTCTGATGTGGAAATGGTGGAGGATGCATCCCGAAAGGAGATGACAGCCGCTTGTACCCCCCGGAGAAGGATCATCAACCTTACCAGTGTTCTGAGTCTCCAGGAGGAGATCAACGAGCGGGGCCATGAGACTCTCCGGGAGATGCTGCATAACCACTCCTTTGTGGGCTGCGTGAATCCTCAGTGGGCCTTGGCACAGCATCAGACCAAGTTATACCTTCTCAACACCACCAGACTTAGTGAAGAACTGTTCTACCAGATTCTCGTTTATGATTTTGCCAATTTTGGTGTTCTGAGGTTATCGGAGCCAGCACCACTCTTTGACCTGGCCATGCTCGCCTTAGACAGTCCCGAGAGTGGCTGGACAGAGGAGGATGGTCCCAAGGAAGGACTTGCTGAGTACATTGTTGAGTTTCTGAAAAAGAAGGCTGAGATGCTTGCAGACTACTTCTCTCTGGAGATTGATGAGGAAGGGAACCTGGTTGGATTACCCCTTCTGATCGACAACTATGTGCCCCCGCTGGAGGGTCTGCCTATCTTCATCCTCCGACTGGCCACAGAGGTGAACTGGGATGAAGAAAAGGAATGTTTTGAAAGCCTCAGTAAAGAATGTGCGATGTTTTACTCCATCCGGAAGCAGTATGTGTCTGCAGAGTCAACCCTTTCAGGCCAGCAGAGTGAAGTGCCTGGCTCCACTGCAAACCCCTGGAAGTGGACTGTGGAACACGTCATTTATAAAGCCTTCCGCTCCCACCTGCTGCCTCCAAAACACTTCACAGAAGATGGGAACATCCTGCAGCTTGCTAACCTGCCTGATCTCTACAAAGTCTTCGAGAGGTGCTGACTGTGGTCGTCTGGGGACTCTGGGATGGTCTGTTCTTCCTTTTGTGTCTTGATGTCGGTAGGTGGAACTCTGACCTCACGCACGCCTTCTCACTAGGAGCACTGCTTCATGTGTGGCAGATTGACTATAAATAAATAGCCACATTTGTCCTGAGCGTGATTTATTTAATTTCATTGCAAATGAAATCCATTTTCACCTAGTGTATACCTGATTGTGTTGAAGACTTCCAAAAGTAGTTTGAAAGCCTCCTGGACATCTGATAAGAAGTCTGAATGGCCTTAAAAATTTTATATAGATCATGCATTGATTTGATTCTTTTTATATTCTGATGAATTTCTAGTATCAGGTGATAGACATTATGTTTTTTATGCTTTTAAAAGGCACCTGAACCTATGAGAGACTCTGATGGTATTGTCAGTTCAGCTTTCTACATGGTCAGTCTATTAGTACCTTTAATAACTAGTGTAAAAAAAAATTGAACAGTCCTTATGCAGTGCATAACAGGCATGAGTTTTTAAGTTAGCCTACTTTGTTAACGGCTATCAATAATACCAGCATATGATAAAGGCATTTCTAGGCATTTTTCTTTGAGGGGTGTTATAAAAATACAAACTTGAATTAATATCAGCCTGCATTTAAGAAATGTGCAGTCAGCACTGGGAGGAAGAATGCCTGTAGTACGGAGGTAAAGTCCAGAAGAATCTTATGAGAAGTGGAGCCATTCCATTTGGAAAAGACAGGGACAAGGACAGGCCGCTCTGGGAGGAGCAGAGGCTGAGCGAGCACGGAGAGGAAGAGGGACTCCAAGGCCGCCTCCTGGACCACACAGGATGTCGGTTCCAGGCATGGGAGTCGAGGATGAATCTGCATCCCAGAACATGCCTCGCCACTGCCCACTCCCACATGAAATCACCTCAATTCAGGACATTGGTTTCCATGTTTTAAAAACAGAGCTAGATGATAATTATTCTAAAGAAGAGAATAATTATTAGAGATCTTATTCATATTTAAGTTAACTTTATTACCTAGTTTCATGTCTAATTTTATCTTACGTGGCCTTAATTCATTAGACTTCCCCCGTATTTTTTGTGTAAACACGTTGAAGATACAATAATCATTTCCATAAAACCACTTCGATTCTGAGAACGACAGAGAATCACAAATACTGCAACATGGCTACACACTCCACGGCAAAATCCTCTCGAACTGGGTACCTTTAAAGATGAAACCAAGGTTCTTAAAAGAAATTTTGTATTTCAGATTATTTTTCCTTAAGGAGAGAAGAGGGGTGTGAGCTAGGAGGGGCGTGACTGCCATGATTTGTTTTAAAGGCTCCTCTTAACGAATGTGTCAGTAGCCGACTGTAGGCAGAAGGGTGTGTTTAACAGACTCTTGAGGCCGACCTCCGCCTGCCTGGCCTGCCCTCCCTCCTCCTCCATCAGGCTGGTCTGAGGTTTCATTCCACAAATAAGCAGCAGATGAAATACTTTACAAGATACAGCACAGCTGATGTGAAGACTAAGGCCCCTACTCTTACTTTAAGAGCAACAGGCCCTGGGCGCCCCTGCCCCATGCAATAAAACAAGTTTTATATACACTTCCCATATCCTTTTCTAACATTTTCTTATATAAATTTAAATATCTTACAAAAAAGGCTTTTTCCTCCAAACATACAAATTTGAGTGAAACATATATTCCCCACCAGTGAACTTGTTTCTTCACTAAATATAAACACTACCTGATATTAAGGGTAAGTGTCTCTTGGCCCCTGGAGATCACTGTAGTCTGAATTGCACCGTGGAGAAGGCACTTGTGTTTCTGAGGTCTCCAGGAAGTATCTCAGCGGGCGCTGAGCCGCTGTCCTCCAGAGCCGGGCCCAGTCACTGAGGCGGCTGGGGAAAATGGTGAGTAAACTTGATTCTAAAATTACGGAAATAAAAAATAACGGCATGGACTAGTTCTTAGTCTAGAATCAAACTACACACAAAGTGTTCATTCATGAAGATTCAAACCTGTTTCATTCTCTCATAAATTAGAAAATACAAAGGTGGCTATCTGAATGCCAAAGCTCAAACAGTCCTGAAAGGGGTCTGCGTCA EMBV3_30239 CGGATGGGGATGAGGGTGGGAGGGGTGCTGGGGAATAAATCTTGTATGAGAACAACCTTT Gene GeneID:789163|LOC789163:XM_002695994:377_cdna UTR3_Alt 2 NULL GeneID:789163 19 GENE LOC789163 NULL hypothetical LOC789163 EMBV3_23548 TACTCTCCAGTTGCAGTGTCTGACTTCTCATCGCGGTGGCTTCTCTTGTTGTGGCGCACA Gene BVV0102_225782 - 1 EMBV3_36412 GK000029.2:1019331-1032161 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162875 TCONS_00162876 1 XLOC_099751 NonCoding TCONS_00162876 XLOC_099751 NonCoding NonCoding - 29:1029657-1030261 - TSS122203 604 1 TCONS_00162876_1 46 0.986754966887417 1 0 0 8.31819433479847e-05 9.57573561494018e-07 1.37485909808991e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0010712810850911 0.000291699423874237 1.75911461112512e-05 0 0 0 0.000772379391919336 0.000582733154375375 4.85029110790147e-06 0 0 0 NM_001192140.1 TBX21 Bos taurus T-box 21 (TBX21), mRNA. 9e-56 221 75.69 0.516556291390728 0 noncoding ACAATGGCCTCTTTGCTGTTTCTTGAAACTACCAAGCTCTCTTCTGGCTGAACCTTTAAATCTGCCAGAAAGGATGTTTCTCCAAATAACCTCATGGCTCACTCTCTCATTTTTTCAGGACTTGGCTCAAACGTCTCTTTATCGGCAGCTTTCCCTGATCTCTCTCTATAAAATGTGTAACAGTCTGATTCCACTTCTGGTGTTTGACTGCTGACAGATATTAAGCCTTACCCCTATCCTTCCTCCCCTTCTGCCCCCACGTTTGTGTGATAAGAAAGCCTGGCTGTGGGCTTCCCCGAGTGGCTCAGTGATAAAGAATCCTCCTGCCAATGCAGGAGACACGAGTTCGATCCCTGGTCTGGGAAGATCCCACATGCCGCAGAACAACTAAGCCTGTGCACTGCAACTATTGAGCCTGTGCTCTAGGGCCCTGCAGCTGCAACTTCTGAGCTCACGTGCGGCAACTACGGAAGCCTGTGTGCCCCAGAGCCTGTGCGCCACAACAAGAGAAGCCACCGCGATGAGAAGCCAGACACTGCAACTGGAGAGTAGCCCCCGCTCGCTAGCGCAGCAATGAAGATCCAGCACAGCCAAAACTAAATAA TCONS_00164346 TCONS_00164347 TCONS_00164348 TCONS_00164349 r 3' 1901 TCONS_00164346 TCONS_00164347 TCONS_00164348 TCONS_00164349 r 3' 2504 EMBV3_32266 GCCCTACCTGTTATCTTAGTCCACTTTCAGTTTCCCTTCCAAGGCCCAGAGTTCTAGGAG Gene BVV0102_338520 - 1 EMBV3_37566 GK000019.2:27087302-27089298 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099355 1 XLOC_059598 NonCoding TCONS_00099355 XLOC_059598 NonCoding NonCoding - 19:27087913-27088621 - TSS73731 708 0.675141242937853 1 0 0 0 0 0 0 0 0 0 0 0 3.87996690000612e-05 6.06049266885727e-05 2.02632842199473e-05 3.98643653502214e-05 6.92967165200959e-06 0.000111913216817716 0.000117247791428298 0.00131124605679615 0 0 0 5.24058556777027e-05 0 7.10365521286909e-05 0 0 0 1.3566669904678e-05 1.37135765444958e-05 2.547562466644e-05 XM_586141.6 FRK PREDICTED: Bos taurus fyn-related kinase (FRK), transcript variant 3e-12 77.0 75.45 0.148305084745763 0 noncoding 0 0 0 0 -0.0157821720562648 0.893448117284208 0.0505648896604859 0.433043582308228 CCCCCTGTTACCAAACTCAATTATAATTTTAGCTTCCCCCAAGAATGGAATCTTAAACCAGTCTATCTGGAGTTACATGGTCAGCATTAGTGAGGTAATCTGCCTGATAGACCCTTTCTGTCCCCTAAAGCAAGGTGATTTTGCCACAAAGAAATCTTTGCTGGTATAATTTCCTTGTCCCACCCCTTTCTGCCTGTAAATCTTTCATTTTGTATAGTTCTTCAGAGATCTATCTGCTGGGTGGAATGCTGCCCGATTCATGGGTCATTAAAAGCCAGTAAGAGCTTTAAAATTCAGTCCTGCTGAATTTTCTCTCTTAACACCTCCCTTTAATTTTCCAATTACCCACCTTACAAACAATACCGGTATATATGGCCCAACTGAGTTCTTGCTATATGGTAGTCTGTGAAAAAGTCCTACAAAACTGCTTTTCTAATTTAATCCTCCCAATAATCCTGTGATAACTTCTATTATTTTCCCATTTTACAGTAAAACAAACTAAGGCTCAGAGAGATAATTACTTGTCAAGATCATAAGGGCAGTAATTGGCTCTAGAGACCCTACTGATAAGCACCACTAGCCCTACCTGTTATCTTAGTCCACTTTCAGTTTCCCTTCCAAGGCCCAGAGTTCTAGGAGTAGACTTTGTCTTTTACCTCCGGATTCGGGATTCCACCACACTAAACGTGCTCTTGCACTTAGTTCCTA TCONS_00092970 . 5' 179 TCONS_00092970 . 5' 179 EMBV3_26793 GAATGCAACAGTAGAAAACACTTATGGGATTTGGCATAGGTTATGGAATAAGCCAGGGTG Gene GeneID:508189|LONRF3:XM_002699466:38_cdna Constitutive 0 NULL GeneID:508189 X GENE LONRF3 NULL LON peptidase N-terminal domain and ring finger 3 EMBV3_33449 CGGTCTAAACCTGACTGGAGGAAACCATCTTTTTCTTCTGGACATGCACTGGAATCCATC Gene GeneID:531369|TTF2:NM_001080735:62_cdna Constitutive 0 NULL GeneID:531369 3 GENE TTF2 NULL transcription termination factor, RNA polymerase II EMBV3_23776 CCATCAGCAGTGATTGGATTATCTGTACCTGCCCCACCAACTCAGCATTTCGGTGCTTCC Gene GeneID:282857|SNCA:NM_001034041:153_cdna Constitutive 0 NULL GeneID:282857 6 GENE SNCA MGC127560 synuclein, alpha (non A4 component of amyloid precursor) EMBV3_36466 TGTCAGAAGACCAATGGGAAACTTGGAGCGGAGGTCCTGAGGCTGGAGAAGGCACGATCT Gene GeneID:781739|LOC781739:XM_002694232:169_cdna Constitutive 0 NULL GeneID:781739 16 GENE LOC781739 NULL similar to F45E12.5a EMBV3_41733 CTGAGCTTAAGACCTTATCTTCAAATCCAAAACGGGAAAAGTCACTTCCAGTAGTTCACC Gene GeneID:100125777|BTBD6:NM_001105050:2_cdna Constitutive 0 NULL GeneID:100125777 21 GENE BTBD6 MGC155278 BTB (POZ) domain containing 6 EMBV3_06394 ACTCCAAGCGTTTCTTCTTCGACGTGGGCTGTAACAAGTACGGAGTGTTCCTGCGCGTGA Gene GeneID:504276|LOC504276:XM_002686882:76_cdna Constitutive 0 NULL GeneID:504276 4 GENE LOC504276 NULL similar to purine-rich element binding protein B EMBV3_15211 AGGACATCTACGACCATAATAGTGGAGGGAACTCGTGTTCAGAAAAGGTCCAAGGTGGGC Gene BVT0102_177732 + 0 NULL GK000003.2:34078943-34082110 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42868 CTAGTGAGGTGTTTGGAGGAGGCACCAGCCATAAAACAGGGGGTGTATGTGTGAATTATG Gene GeneID:536676|NAA15:XM_002694340:79_cdna UTR3_Alt 2 NULL GeneID:536676 17 GENE NAA15 NARG1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit EMBV3_19281 GCCAGGAGGTGGAATCACTAAAACGCAGCATCAAAGTTCTGTCCCTGATCAAGTGGAAGG Gene GeneID:523444|IL1RAPL2:XM_002699804:50_cdna Constitutive 0 NULL GeneID:523444 X GENE IL1RAPL2 NULL interleukin 1 receptor accessory protein-like 2 EMBV3_10410 GACTACCGAGGTCGTGTATGCATCAGCATGAGGAAGCACGTGTGAAATATGAAAAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39442 TTGATCACAAGCTGCCTTGGACTCCTTGCTTGGTGCCCTGCAAACAATGCTGCACTTTCC Gene BVT0102_253634 + 0 NULL GK000012.2:79483268-79605250 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035760 TCONS_00035759 TCONS_00035758 TCONS_00035761 1 XLOC_020991 NonCoding TCONS_00035761 XLOC_020991 NonCoding NonCoding - 12:79582312-79585006 - TSS26169 1666 1 TCONS_00035761_2 75 0.446578631452581 2 0.382101745265503 1.59720690438375e-09 7.50739925036802e-05 4.11497038731708e-13 0.000351660194491171 1.61732213697075e-05 7.26921358983314e-05 5.71339441548031e-11 6.05467243333254e-05 5.96211562505292e-10 0 1.82757258756058e-06 2.57483436617969e-05 1.77659268541499e-11 1.31696399211862e-11 3.38002714751524e-05 0 0 0 0.000884435066639647 0.00104835646356127 0.000551334576394464 7.29033903463496e-07 0 0 4.70420586759857e-19 4.61864483451283e-09 7.39663468989874e-15 0.000109524121639397 1.5453691306216e-11 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 3e-67 260 87.92 0.123649459783914 0 noncoding CCCAGTGCAGGTGCTAATATGGAAGACGTTAACTACTTGATGACCAGGAGCATGAAGCCCCCAGACCTACTGGCTCCTAAGGATTGATCATGATAACCCCTGTGACCCCGCCCCATGACCTCACCATCAACCAATCAGAGAACAGTACATGAACTGGAACTCCCCTTCCTCACCTTCCCTGTGAAAAGGCTTGCCTGAACCTCTTGGGGGGAGTTTGGGGGGGTTGATCACAAGCTGCCTTGGACTCCTTGCTTGGTGCCCTGCAAACACTGCTGCACTTTCCTTCACCAACACTGTGTCAGTAGATTGGCTTGACTGCTGGAGGGCAAGCAGATCCAGGTTTGGTTCAATAACCCATCACTGTGTAATAAAGTATCCTTCTCAGAGCACTGAGAAGGTCTCAGTCTGCAGGACTGCTTCAGTGAACTTGCATCATTTCCACGGATCAATCTCTAGGTTCAGGTGTTAAAAGAATAAATAAATCTTGACCTCTGTCACCTGCCACTGGAGAAGAAAGGAAGCTTAATACTTGGTGACAGCATTATCAGCATCAGTACCTTGTCCTGCAAAGGCGGTGCTAGTGGTAAAGAACCTGCCTGCCAATGCGGGAGATGTAAGAAATGCGGGTTCAATTCCTGGGTGGGAAAGATCCACTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGAAGCCTGGCGGGCTATGGTTCACAGGGTCACAAAGAGTCGGACGTGACTGAATCGACTGAGCACACAGAACCTGCAAAACTCAGCCAAAGAAATCTTGCTCCCCCCACCAAGTTCCGTTGAAAGTGGGTGACTTAATATCAGGAAAATGTAGTTTTGTGACCACAAGAGAAATTGTTTCAACAGTGAAATGTCAAATTCAAAAAATTAACTTCTAAATTTTTTAATGTAACCTTATAAGATAATCAAATTGTTTTTGAGGATATGTCAGATTTTTTTTGTAACCCATGAACTTGGTCTTTGATATCCTGCTTCAGCATTAACCAGGTATCAATTTTAACACCCAGTCACACCCGTTCAGTGAAAATGAATATTCCATGCATCTGTAGTCACTGAGGACTCTGAGTCTGTCAGACTGAGTCTTCACAGTTCTGAATGGCTGGCCATGGGGAAGTTGGGAGGGGTGAGGAAGGGACGATGAGGCAAATATCAAAGGGTAACCAAAAGAGCTGAAGGAAGTGTGAGCTCAAGAGCTCTGACAAAGTTGGTCTTGCAGCTCACCGGACACCCATGCCCCAGGCACTTCTGCTTTGAGACCATGGCTGTCCAGGTGGTGCTAGTGGTAAGGAATCCCCCTGCCAATGCAGAGAATGTAAGAGACACGGGTTTGATTCCTGGGTGGGGAAGATACCCTGGAGGAGGAAATGACAACCCACTCCAGTATTCTTGCCTGGAGAATCCCACGAACAGAGGAACCCAGGGGATTGCAGTTTGTGGGCCTGCAGAGTGGGACGTGACTGAGCACAGCACAGCCCTATTCGGATAAGCAGTTTAGCACCCAGACCCTCATCTTGTCCTCACTTCTGCTCTGAGTTCTTTTGTCCAGAGATCCTCCAGGGCTGGGACCTTGCCTTGTCTCCTTGTCTCCTAAGTCTTGAGGGTCTCCAAAGCCAAC TCONS_00037383 r 5' 6812 TCONS_00037383 r 5' 6812 EMBV3_14857 TTCTCAGGTTCTTGCCTCCTTGGGGCAGTCAATTCATTTATTCTTTGAGAGCCTGCCCTT Gene BVV0102_026716 + 0 NULL GK000006.2:67962723-68316336 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22885 CCGTCCCGGAGGAGTGAGAATGAGGACATCTACTATAAGAGCATGCCAAACCTTGGAGCT Gene GeneID:281278|LPHN2:NM_181013:5_cdna Constitutive 0 NULL GeneID:281278 3 GENE LPHN2 LEC2 latrophilin 2 EMBV3_32811 GAGGGGAGCTTTATTTTCTTCACCAGAATTGTTGCTAAGCAGTTCTCAGTAGAAAGCTGC Gene GeneID:539359|LMO7:NM_001109801:5_cdna Constitutive 0 NULL GeneID:539359 12 GENE LMO7 NULL LIM domain 7 EMBV3_21909 TGTGTGAGACGTCCTTGGAAGGCCAAAGAGGCTGCCAATCTGCAGGGGAAAAGGCAAATT Gene GeneID:767832|GOLGA7B:NM_001076954:255_cdna UTR3_Alt 3 NULL GeneID:767832 26 GENE GOLGA7B C10orf132 MGC142751 golgi autoantigen, golgin subfamily a, 7B EMBV3_24959 AGGAAAATTAACTTCACCGCATCCCTATGATGTGTCACAGATGGCACCAGGCAACGCATG Gene BVT0102_236501 + 0 NULL GK000002.2:133698221-133789484 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112856 1 XLOC_068751 NonCoding TCONS_00112856 XLOC_068751 NonCoding NonCoding - 2:133699896-133700527 - TSS84477 631 2 TCONS_00112856_2 44 0.359746434231379 1 0 0.000495929310624769 0 7.33280420350211e-05 0.000447449693030157 3.912187708897e-05 0 8.317807029363e-05 0.00114357438128234 0 0 0 0 0 0 0 0.000251140290760732 0 0 0.000284109580784933 0.000125365609029092 0 0 0 0 0.000153722175819225 0.0023112668812412 0.000733555021099306 3.04442682100569e-05 7.69349399317921e-06 0 0 noncoding 0 0 0 0 -0.179042025172632 0.36078648389938 0.0133285900894059 0.808106917202764 GAGGAAACAAAGTCTCTGTTCTGGGGGAACTTTACAGTGCGGTATTTGTGTTGAGAAAGAAAAGGAAAATTAACTTCACCGCATCCCTATGATGTGTCACAGATGGCACCAGGCAACGCATGTAATTTCATTTATCCTCACAGCAAGTGATTTTAGTATGTTAAGTTTCAAAGATTTGGAAACTGAGTCTCAGAGACGTTAGGTAACGTGGAAGATGCACAAGGCTCTGCATTGTGTAGATTTAGAAACTGACAGACGCATTTATTGGATTCAAGAGGGTTGTAAACTTTTGTAGAAGGCAGAGAGCAAATTACGAAAGCAATCAGAGGCAGATGGTAGAGCGTGAATTCTGGAGCCAGGCTGTCTGGGTTCAGATTCCAGCTTTTTCCTGGTTTGTATCTGTTATCCTCTTTCCAGGTTCCTCTCCCAATATGATGCTTTGCTCACTGCCCTATCCGCAGCGCTAGAACCGTATGTGACACATTGTGTGTGTTTGATGAATAGATGTTGGTTGAATGAATAAAATAAATGAAGGCTCTGGAGTTTTTATAGTTTTTGGAGAAAAAAGATCAATACAAGTGGGGAAAAAATTTTTTTAGGAACATCACTACACAAAAACCTCAGCAATACA TCONS_00106950 . 5' 392 TCONS_00106950 . 5' 392 EMBV3_42203 TTCTCAACCGTGGAATACCGGACCACAGAATACTCTTGAGAGAAGCTATTGCTAGTCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11985 GCAAGAATGGGGAGGAACTGGAACCCTCATATGCTGTTGGTAGGAATGCACACACTTTGG Gene BVT0102_166602 - 1 EMBV3_08700 GK000006.2:99518775-99526728 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205956 TCONS_00203930 TCONS_00203932 TCONS_00205953 TCONS_00205954 TCONS_00205955 TCONS_00203931 2 XLOC_124792 XLOC_124305 Coding TCONS_00203931 XLOC_124305 Coding Coding THAP9 6:99498239-99524188 j TSS152660 7913 1 TCONS_00203931_3 799 0.403639580437255 5 0.695236627100354 0.000629702763673437 0.00114064658485418 0.000553899097745634 0.000573895386772935 0.000833002271035048 0.000275321311711445 0.000522218177084709 0.000477724024276073 0.00114361023907666 0.000162499729053305 3.28347437933314e-06 2.62141626608972e-05 9.49628535298325e-05 0.000260936941247815 8.18980263828123e-05 0.000126175927868466 1.9170729589693e-177 9.58657910654439e-05 0.00111070506243803 0.000633938545772669 0.000277943040370487 4.38489102050214e-52 3.08524944576251e-05 5.37761628249831e-05 0.00047323011194016 0.00108253343924346 0.00058832686362895 1.66301255506204e-05 1.13373517252022e-05 2.81182322990359e-182 NM_001244183.1 THAP9 Bos taurus THAP domain containing 9 (THAP9), mRNA. 0.0 3011 100.00 0.210792366991027 NM_024672.4 THAP9 Homo sapiens THAP domain containing 9 (THAP9), mRNA. 0.0 2228 80.05 0.312650069505876 TCONS_00203931_3 sp|Q9H5L6|THAP9_HUMAN THAP9_HUMAN THAP domain-containing protein 9; 0.0 930 81.98 0.692115143929912 1 coding 1 1 1 1 0.0724440576808387 0.619490348817666 -0.00563343423735781 0.914588112472796 AATAAAGGTAGTAGCTGCGGAGTCAGCGGGCGGAGCTAACTTGACCGCGACTCATGCTGTCGCGGGAACACCGGAGGTGGAGCCCCACGTAGCAAGAAGATGACCCGAAGTTGCTCGGCAGTGGGCTGCAGCACACGAGACACCGTGCTGAGCCGGGAGCGCGGCCTCTCTTTCCACCAATTTCCAACTGATACTATACAGCGCTCAAAATGGATCAGGGCTGTTAATCGTATGGACCCCAGAAGCAAAAAGATTTGGATCCCAGGACCAGGTGCTATGCTATGTTCCAAACATTTTCAAGAAAGTGACTTTGAGTCATATGGCATAAGAAGAAAGCTGAAAAAAGGAGCTGTGCCTTCTGTTTCTCTGTACAAGGTTCTCCAAGGTGTACACCTTAAAGGTAAAGCAAGACAGAAAATCCTCAAACAGCCACTTCCTGATAATTCTCAAGAGGTTGCTACTGAAGACCATAACTACAGTTTAAAGAGACCTCTGACAATAGGAGCAGAGAAGCTAGCTGAGGTGCAGCAGATGCTGCAAGTGTCCAAAAAAAGACTTGCTTCTGCAAAAAACTACAGGATGATCAAGAAGAGAAAGGGCTTACGACTAATTGATGCGCTTATAGAAGAGAAGCTACTTACAGAGGAAACAGAATGTCTGCTACGAGCACAATTTTCTGATTTTAAGTGGGAGTTGTATAACTGGAGAGAAACAGCTGAGTACTCGGCAGAAATGAAGCAGTTTGCGTGTACACTCTACTTGTGCAGTAGCAAAGTCTACGATTATGTAAGAAAGATTCTTAAGCTGCCTCATTCTTCCATCCTCAGAACGGCCTCTGGATATTTGCAAGCTCAGCTGCTTCGTCTGACAATTGGCAGACTAAGTGACATAGGGATCACAGTGCTGGCTGTCACATCTGATGCCTCAGCTCACAGTGTTCAGATGGCAAAGGCCCTGGGGATACATCTTGACGGAGACAACACGAAGTGTACATTTCAACATCCTTCATCTTCCAGCCAACAGATTGCCTACTTCTTTGATTCTTGCCACTTGCTTAAATTAATAAGAAATGCATTTCAGAATTTCCAAAGCATTCAGTTTATCAACGGCACAGCTCATTGGCAGCACCTCGTGGAGTTAGCAGCACTAGAGGAACAGGAATTATCACATATGGAGAGAATCCCAAGAAAACTTGCAAATCTGAAGAACCACATACTGAAAACGAATTGTGCCGCCCAAGTCTTCAGTGAGAGCGTGGTCAGGGCGTTAGAATGTTTGCTATCGTTAGGCCTGCCTTCTTTTCAGAACTGTGTTGGTACCATCCACTTCTTACGCTTAATTAACAATCTGTTTGACATTTTTAATAGTAGGAACTTTTATGGAAAGGGATTTAAAGGACCTCTATTACCTGAAACTTTTAATAAAATCAACCATGTGTTAACTGAAGCCAAGACTATTTTTGTTACATTATCTGACACTAGCAATAATCAAATCCTTAAAGGTAAGCGAAAACTGGGATTCCTGGGATTTTTGCTTAATGCTGAGAGCTTAAAATGGCTCTACCAAAATTATGTTTTCCCCAAAGTCATGCCTTTCCCCTATCTCCTGATGTACAAATTCAGTCAGGATCATCTGGAATTATTTCTAAAGATGCTCAGACAGGTATCAGTAACCACTTCTAACCCTACCTGCGTGGCATTCCAGAAAGCTTACCATAATTTGGAGACCAGACACAGATTACAAGATGAGGTCTTTCTAAGTGAAGTAAGCAGCCTTGACATTTCAATTGCTCGAAGGACAGACCTGGCCCTTGGGACAGTTCAGCGTGAGTATGGTGTCAGCGTTATAGAGAGTCTTTTTTACAAAGAGGATATTTGCCCAGACTGGTCTGACTGTTTGCTGAGCGAGGCCTTACTAGACCTGTCAGTTCGTAGGCGAAATCTCACCTCTTGCGCTGGTTATATTGCCAATAAGTTATCAGCTCTTTTAACATGCGAGGACTGCCTCAGTGCGCTGTATGCATCGGATCTCAAAGCCTCTAAAATTGGATCCCTGTTATGTGTTAAAAAGGAGAATGGTGTGCATTTCCCTTCTGAAAGTTTGTGCCGAGTCATAAATACTTGTGAGCGAGTTGTGAGAACCCATTCAAAACCAACAGTTCATGAACCACTGCTTCCCAAACAGAGGGAATATTACCTTCAACAGAAAATATTATATGAGCTTTCTGGGCATATTTATCTTTTTGTAGAGTTAGATGAGCATCTCTTTGATGGAGAAGTATATGCCATCAATCACTTTGTAAAGTTACTGAAGAATATCATAATCTGTTTCTTAAAGATCAGAGCTAAAGATGTAACTCAGTACTCCTTAAAACACCACTCAGAAAGAATTGAGTTGAAAACTTTGTCAAGCAAACACTGGTCATCTTCACAGAATTACAGATGTTCGAGTTTTGCCAATACCAATAAATTCAGGCATTTGCTAAGGAACAATAGATAGACATTCAAATGAAGGACCTAAAATATATTAACATTTTTATTAAAAATAATTGGTCAACATTTATTTTAAAATTCAGCTGACAATATTTTACAAATTCTGCACAGTGGACAAGTTTGTGTCTGTGTCTTAGGAATTTCTGTTATGCACGTTATCAAATCTGCATGGAATTTGGTAGGGCTTGCAAGCATTTCAGAGTTACCTAAAACGTAAAAAGCGAGAAGTCAGTAAGAACACTAGCCAACAGGTGCTGTGTTTGAATTTACGACTATCCAACTGAGTAATTCAACTGGACATACTTTAAAAACAAGTGAGAATGGCAGAAACAAGCACAATATTGTAACACAATTATCCTCCAATAAAAGTTTTAAAAAGAATAATGACAAAGGAGTCACTAAAACATTGACTCCTTTTATAAAGACTACATTCCCAGAAAGAGATTTGGTCTACAACTCTTAAGAATAACACTTGAAAAAAAAAAGAAGACTGTTAACAGAATACCTATCAAACTGTGAATATAGTTTACTTACACATGAAAATTAGGCCAAGTTAAATACCAAACACTACAAAAATCCTTTTGCTGGGGTACCTTTAAATAGAAATAATTAAACTCTATTAGGCAGAAGGTAAACAAACACATGAGCCCTGAAACGGACGATTCCTTGTGCTACAGCCAAGCTCGGAAATGTTGTCTGGGGAGTATGCAGGTGACGCAGTTTTCACAGCCCATTTGTCTGGACTTCATACTACTATGAATAATAGAGTGGGTACTTGACTCCTATTGGAGGAGCACAGTGCTCACCAGAGAACGCAAAGAAGCCTTTTCTCAACTTCTTCTGAAGAGGATAATGATGAAACATTTTCAGTTTGCAATAAGGTTGTTTCATATCATGTGATAAATCAGTTGGGGAAAAAATGGTCAGTTGGGAGAGTATGAAAAAGTTTGTCTTAATCACATAATGAGATTTTTCAGAAATTTGGGAGAAGCTTAAATAATCTGAAGATGGAAACATACTAAGAACAATTTTCTCTCTCGTATCCAGATCTGAAAAGACAAAATAGGATAACATATAGTTATATGTACTTCCAGAAATGGGGGTATTTTAATGGGGAAAAAAAAAAATGAACACAGACATTATTCACCTATGTAAAGTATCTCTTATTGTCATTAATATTCATAGACTACAGTTAATATGAAGACAAAGTTGTAAAAGATTAAGGACAGATAAAACTTGTTTTATTCATCGAAGTTCCCCATAAATAGTATATTTTGATATATTTCTGGTGGGTCTACCTCAAAGGCTTCAGTTTTGAACTGTAACCAGAACTGTCCTGTACTGCATTTTATAAGGAGATATTACTAAGGAGTCTGAATACTGTGGGTTTTGTTTTGTTTGCACTAGAATGAGTTTAGATGCACCAGGATAAATCTTATTTAAAGGAAGCCTGTTTATGTCACCACCTTTAACTTATTGCTTATATAAAGTCAAGTTTTGTACTTATTTTAACTTAAAGCTAGGTTCATATCTGTAGTGTCTTATGTTCTCTGCTGTTACATCTGACCCATGTCTTGTGTAATTTATTAAAATAGTGCTTTGCATTTATTTAAGTGCTGGGTATAAACTGGACAAACGCTGAAGACAAGAATTTTTCCATCACTGCCATTAGCTCAGTTAGTTGTTCTTGCCTTAGTGCAGTGATCCAAGTCTGATGTCAGATTTACGTGATATGATATGCTTCACAGTGAACTTGCTGTCCATACTTGATTAGGGTAATTGATAGTTTACAGTTTCTACTCAGCACCCTTGTTCTTTCTCTTCAGAGAAAACAAATGTTCAGAAATGTATCCTTCCTACTTTCAACAAATAGTGCTGGAATAACTGGATATACACATGCAACATGTTAACTCTAAATGGAGCAAAGATACAAATGGAAGAGGTAAAACAACTCTTAGAATAAAATAGTGGAGACTCGGATTCGGCAATAGCTTCTTAGGACACCAAAAGTACAAGCAAAAACTTCATCAAAACTGAAAACTTTGTGCTTTAAAGGACACCCGTCAAGAAAGTAAAGGACAAGCTATAGAAACATTTTCCAAATCATGTGTCTGGTAAAGCACTTGTATCTGAGTATACAAAGAACTCAATAATAAAGGATAAAACAACACAATTTTTTAAATGGGTAAAGAATACGAAGTTATTCTTCAAAGGAGATATACATGAATATGTGCTCAACATCATTAGCCTTTTGGGAAATGCAAATCAAAACCACAACGAGATATCACTTCACACTCACTAGGATGGCTGTAATAAAATAGACAAGATAACAGGCGTTGGCAAGAATGGGGAGGAACTGGAACCCTCATATGCTGTTGGTAGGAATGCACACACTTTGGAAAACAGCCTAGCAGTTCTTTGCCAAATGACCCAGCAATTCTACCAATGGGCATATACCCAAGAGAAATGTACAAATTTCATAGCAGCATTAAAATAGCTAAAAAGTGACAAAGTCCAAATGTCCAACTCATGAATGGATATTTTACATTGTAACAAACTATCTTTTGCTGTGATGTACCATGCAGTACATTAACCAGAAATACATGAAAAGTTCTAGTTCCTCTACTTTCTCCCCAACACTTGGTATTGTCAGGGTTCTGTTTTGAATCAGCTGTTCTAATGGGTGTGCCGTATTTCATTGTGGCTTTCATTTCTTTTTCTAATGACTAATGATGCTGAACATCTTTTCATAGGTTTATCTGCCAGTCACTGTCGTCTTAGGTGAAATGTCTGTTCAAGTCTTTTGCCTCTATTTTAAGGAAGGTTGATTGTTCTCTTACTGAAAACAGTTAAATAAAAACAGTAAGTTAGTTAAGTATTCTGGATAAAAGTACATTATTAGATGTATCTTGCAAATACCTTCTCCCAGTTTATGGCTTTTAAAATTTGAGGTAAAGTTGTACAGTGTAAGTTGCAAGTGTATAACATAATGAGTGGTTCACAATTTTTAAAGGTTACGATGTGGCTTTTACTTTTTTAGTATGTTTTGAAGAACAGACATTAATTTTATAAGTCTAATTTATTGATTTTTCTAGGGATCACACTTCTTAGTTTCTTATCTAAGAAATTTGTCTAAACCAGTCACAGATTTTTCTTCCTATGTTTTCTTGTAGATATTTTCCAGTTTTAGGTTTTGCATTTAGGTTATGATCCGTTTTCGTTGTCTTTCGTGTGTGGTAGTTCGTATTTTTACATACTGATGGTATCCCAGCACCATTTGTTAAAAGGACTGTTCTTTTCCAGTAAATTACCTTTGATCCCTTGTCAAAAATTGACCACATAAATATTAATCTATTTCTGGGCTCTGTATTCTGTTGCCTTGATCCATGGGTCTTTCATCAATACCACATTACCTTGATTAGCCTTATATAATTCTTGAAGTCAGGTAGGAGTCTTCCAACTTCGTTCTTTCATAAAAAATGTTTGGCTATTCCAGTTGTACCTTCCCATGTAAATTTTATAATCAGCTTGTTTTTACAAAAACTCCTTATGGGATTCTGACTGGAGTTATGTTGAATCTATAGGCTGAGGAGAAATGATATCTTAATATTGACTTCCAAACCATGAAAATTATATATATATAGAAGATCTTCAATTTTTTAATCAATGTTTTTGTTTCACATACAGATCTTGTACATATTTTTGTTACGTTTCATGTTTTGTGGTGCTGCTATAAATGGTAATTTTAGAATTTCAGTTTCTAAATGTTCATTGCTACTATGTAGAAATATACTTTTTTGCAAACTAATATTGCTAAATGCACTTGTTAATCCTAGTACCTTTTTATTAAGACCCTTTGACTTTTCTTATATAGGCAATCACATCACACCATCCACAAATAGACACTGGCATATTTATTCATTCCCAATCTATGGCCGTTTTGTAAAAAAAAGAAAATCTTATTGTACAGTGACCCAAACACAACACTGAACAGGAGTGTTTTGTTCCCAATCTTAGGGGGAAACACAGTCTTCACCATTCATGTGATGTTAGTTGTAGGCTTTTTGGTTGAGGATCTTTTCTATTCCTAAATTGCGGAAGAATTTTTTTAAACCATAAATGGGTGTTGGAACTTTCTCAGATGATTTTTCTGCTGGTTTCAGGGGGAACATTTTTGAGCTCTAATTTACATACCATAGTATTCACCCTTTTAAAGCATGTAATCTAGTAGTAGTTGGTATAGTCAAAAGGTGGTTTTCCGCAGTTTTTGAGATGATTGTTTTTCTTTTGTATGCTGATACACTGAACTACACTGATTTCTTTGAATGTTGGGTCAACCTTTTATTTCTGGGGTAAACCCAACCTGTTCACAATGTATTCTTTTTATTTACTGTCAGATTTTTCTGTTGTTCAGTCGCTAAGTCGTGTCCAACCCATGGACTGCAGCACGCCAGGCTTTCCTGTCTTTCACCATCTCCCGGAGCTTGTTCAGACTCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTGTCATCCCCTCTCCTGCCTTTGATCTTTCCCAGCAACAAGGTCTTTCCTAAGTTGACTCTTTGCACCAGGAGGCCAAAGTACTGTAGCTTCAACTTCAGTCCTTCCAATGAATATTCAGGGTTGACTTCCTTTGGGATTGACTGGTTTGATCTCCTTGCTGTCCAAAGGATTCTCAAGAGTTTTCTCTGGCACCACAGTTTGAAAGTATCAATTTTTCGGCACTCAGCCTTCTTTATGGTCCAACTCTCACATCTGTACATGACTACTGGAAAAACCATAGCTTTGACTATACAGACCTTTGTCGGCAAAGTGATGTCTCTGCTTTCGAATGCGCTGTCTAGGTTTGTCATAGCTTTTCTTCCAAGGAGCAAGCATCTTTTAAATTCATGGCTGCAGTCACCATCCGCAATGATTTTGAAGCCCAAGAAAATAAAATGTCACTGTTTCACTAAATTATAGTTACATTGAAGTCTGTGGCCTTATAATAAACATTACTCTGAATATACTTTTTGAAACTAAAAATGCCTTAAATGCAAAATAAAGTTTTAATTAAAGCCTTTAAAACTTAGTATTTTATAAAATTACTTGGATTAAAAAAGTTCACATTTGGTCTATAGGTAAGGGGGAAAATGTGCATTAAAGAAGCCCTAACAAGAAAAAAAAAATCCTAAGTATTAACATAATGAAAAGTAACTATAGTAATAAAGGCTTCTTAGCTGATTGACTTCCCTCTCCTTTAAGCTGCTGCTCCAGAATTCCTATATAAAATATTAATACTTAAGGATTAATACTTAAGGATGCAGTACGATCACAGGGCTGGAGGTCCTGGTTTGAAGCTGTATTTACATAACAAGTATTCATCATCTTAGTTATTTGTGTTATA EMBV3_37094 CAAGCATCCATGTCCCCTCACCGGCAGTCCCTAAACTTAGCATGGCCAAATGCAGAAGAA Gene GeneID:505325|LRCH1:XM_002691830:525_cdna Constitutive 0 NULL GeneID:505325 12 GENE LRCH1 NULL leucine-rich repeats and calponin homology (CH) domain containing 1 EMBV3_25923 AAGGAGCCACAGCCCTAGTGACCCTCCTTCCTTTGTGTCTGGGTTGGAGTTACCACCTCG Gene BVV0102_028140 + 0 NULL GK000005.2:63121577-63125176 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192235 TCONS_00192238 TCONS_00192231 TCONS_00192236 TCONS_00192230 TCONS_00192229 TCONS_00192239 TCONS_00192234 TCONS_00192240 TCONS_00192237 TCONS_00192233 TCONS_00192232 1 XLOC_117143 Coding TCONS_00192236 XLOC_117143 Coding Coding APAF1 5:63122171-63227727 j TSS143911 4201 1 TCONS_00192236_9 647 0.0473696738871697 27 0.960456633982284 0.00532705180318719 0.00336956447396674 0.00353883534023234 0.00111889951035479 0.00134353645636396 0.000724898112894562 0.00111332394294907 0.00120060750186893 0.000664188552548063 3.98304592764348e-05 1.09318218184577e-13 4.44934115912619e-05 8.98198627474146e-05 0.00052094458839766 4.23304316308752e-05 0.000635208897931553 5.40255799703249e-71 4.82427525163893e-82 0.00834995719776417 0.00534536946002527 0.000998300217317442 0.00014023320888094 7.60298028510113e-28 1.24144308971231e-106 0.00779525507227413 0.00691473107814695 0.00323911343688055 1.36000003021059e-68 4.51417415490192e-06 1.093976900489e-34 XM_005206645.1 APAF1 PREDICTED: Bos taurus apoptotic peptidase activating factor 1 (APAF1), transcript variant X1, mRNA. 0.0 4580 97.93 0.619138300404666 NM_013229.2 APAF1 Homo sapiens apoptotic peptidase activating factor 1 (APAF1), 0.0 3415 88.22 0.619852416091407 TCONS_00192236_9 sp|O14727|APAF_HUMAN APAF_HUMAN Apoptotic protease-activating factor 1; 0.0 1067 87.22 0.905718701700155 1 coding 1 1 1 1 -0.201347578549058 0.154745567448934 -0.0588835035185605 0.410460442604969 CGGGCACAAGATGGGGTAGAGCGCGCGCGGCGGCGGCGGCGTTGTCGTGAATTTCCGGGTGTGTTTATTTGCGTGCGCGGGGCCGCGGCGTCCCAGCTGGGCCGGCAGGCGGGTTTTGAATGCTCCGCGGCCCTAAGGCGGAGAGGCTGCCTTTATTTCTGTGCGGAAGGAGTATGAGAGCTGGTGGTGAGGAGTCTGAGCGGTCAGCTACCCGCGAGGACTTGAAGTAGCCGCAACAGCGGAATCTAGAGTGGCGCCCGGCTCCCGCCCGGCTGCAAGTGCAGCCTGAGGGAAGGAGCCACAGCCCTAGTGACCCTCCTTCCTTTGTGTCTGGGTTGGAGTTACCACCTCGGCGCCGCGGGACTGCGCCGGTCGCCTGTGGGGGTGACGCCCCCTTCTCGGCGGGTCGGAGGTTCGCGGGGGGTCTTCAGGTACCCCTTGCTGCGGACGCTCAGCTCATGGTTGACAGCTCAGAGAAAGAAAAATTTGAGGGAAGATGGATGCAAAAGCTCGAAATTGTTTGCTTCAACATAGAGAAGCCTTGGAAAGGGACATCAAAACATCCTACATTATGGATCACATGATTAGTAATGGAGTTTTAACAGTGTCAGAGGAGGAAAAAGTGAAAAATGAGCCCACCCAACGGCAACGAGCAGCTATGCTAATTAAAATGATACTTAAAAAAGATAATCATTCCTATATATCGTTCTACAATGCTCTACTTCATGAAGGTTACAAAGATCTTGCTGCCCTTCTGCATGGTGGCATTCCTGTTATCTCTTCTTCCGATGGCAAAGATTCAGTTAGTGGAATAACTTCGTATGTAAGGACAGTCCTGTGTGAAGGTGGAGTACCACAGAGGCCCGTTGTTTTTGTTACTAGGAAGAAGCTAGTGAATGCAATTCAGCAGAAGCTCTCCAAACTGAATGGTGAACCAGGATGGGTCACCATATATGGGATGGCAGGTTGTGGGAAGTCTGTATTAGCTGCAGAAGCTGTTCGAGATCATTCTTTCCTAGAAGGTGACACAGTTTGATGCCTGGTCCAGGAAGATTCCACATGCTGAGGAGTAACTAAGCCTGTGTGCTTTGGAACCCGTGCTCTGCAAAAAGAGAAGCCACCACAATAGAAGCCTACGCACCACACCTAGAGAGTAGCTCCTGCTCACTGCAACTAGAGAAAGCCTGAGAGAAGACCCAGGGCAGCAAAAAAAAAAAAAAAGGCAAAAAAGTTTATGATGAGATGACACAATGAGTGGAATACGTGATTGTTTCCCAGGAGGCGTGCATTGGGTGTCAGTTGGGAAACAGGACAAATCCGGGCTTCTGATGAAACTACAGAACCTTTGTGCACGATTGGATCAGGATGAGAGCTTCTCCCAGAGGCTTCCACTTAATATTGAAGAGGCTAAAGACCGTCTCCGCATTCTGATGCTGCGCAAACATCCAAGGTCTTTATTGATCTTGGATGATATTTGGGATCCTTGGGTGTTAAAAGCTTTTGACAATCAGTGTCAAATTCTTCTCACAACTAGAGATAAGAGTGTTACAGATTCAGTGATGGGTTCCCCTCTTGTAGTATCTTTAATTGGTGCACTTTTACGAGATTTTCCCAACCGCTGGGAGTACTACCTCAGGCAACTTCAGAATAAGCAATTTAAGAGGATAAGAAAATCTTCATCTTATGACTATGAGGCTCTAGATGAAGCCATGTCTATAAGTGTTGAAATGCTCAGAGAAGACATCAAAGATTATTACACAGATCTTTCCATCTTACAGAAAGATGTTAAGGTGCCTACAAAGGTGTTATGTATCCTCTGGGACTTGGAAACGGAAGAAGTTGAAGACATATTACAGGAATTTGTTAATAAGTCTCTCTTGTTCTGTGACCGGAATGGAAAATCATTTCTTTATTATTTACATGATCTGCAAGTAGATTTCCTTGCTGAAAAGAATCGCAGCCAGCTTCAGGATCTCCACAAGAAGATGGTCACTCAGTTCCAGAGACATCACCAGCTATATTCTCTTTCACCAGATCAGGAGGATTGCATGTATTGGTACAGTTTTCTGGCCTATCACATGGCCAGTGCTAATATGCACAAAGAACTGTGTGCTTTAATGTTTTCCCTGGATTGGATTAAAGCAAAAACGGAACTTGTAGGCCCTGCTCATCTGATTCATGAATTTGTGGAATACAGGCATATATTGGATGAAAAGGATGGTATAGACTGTGAGAATTTCCAGGAGTTTTTATCTTTAAATGGACATCTTCTTGGACGACAGCCATTTCCTAATATTGTGCAACTGGGCCTCTGTGAACTGGAAACTTCAGAGGTTTATCGGCAAGCTAAGCTGCAGGCCAAGCAGGAGGTCGATAACGGAATGCTTTACCTGGAGTGGGTATGCTGTTTACCATGCTTGCTTTTCTGAAGATGGTCAAAGAATAGCGTCTTGTGGAGCTGATAAAACTTTACAGGTATTCAAAGCTGAAACAGGAGAGAAACTTCTAGAAATCAAGGCTCATGAGGATGAAGTGCTTTGCTGTGCATTCTCTGCAGATGACAAATTTATAGCAACCTGCTCAGTGGATAAAAAAGTGAAGATTTGGAATTCAATGACTGGGGAACTAGTGCGTATCTATGATGAGCACTCAGAGCAAGTCAATTGCTGCCACTTCACCAACAATAGTAATCACCTTCTCTTAGCCACTGGTTCAAATGACTACTTCCTTAAACTCTGGGATCTGAATCAAGAAGAATGTCGAAATACCATGTTTGGCCATACAAATTCGGTCAGTCACTGCAGATTTTCACCAGATGATCAGGTTTTGGCCAGTTGTTCAGCTGATGGAACATTAAAGCTTTGGGATGTGAAATCTGCAAATGAGAGGAAAAGCATTAATGTGAAGCAATTCTTCCTGAATTCAGAGGAGCCTCAGGAGGATCTGGAAGTGATAGTGAAATGCTGTTCGTGGTCTGCTGATGGTGCTAAGATAATGGTGGCTGCGAAAAATAAAGTCTTTCTTTTTGACATTCACTCCAGTGGCCTGTTGGCAGAAATGCACATGGGCCATCATAGCGCTGTCCAGTACTGTGACTTCTCCCCCCACAACCATTTGGCAGTGGTGGCTTTGTCCCAGTACTGTGTGGAGTTGTGGAGTATGGACTCAGGTTTAAAAGTAGCTGATTGCAGAGGACATTTAAGTTGGGTCCATTGTGTGATGTTTTCTCCTGATGGATCATCGTTTTTGACATCTTCTGATGACCAGACAATCAGGCTCTGGGAGACAAAGAAAGTATGTAAGAACTCTGCTACAGTGTTAAAGCAAGAAATAGATGTTGTGTTTCAAGAAAATGAAGTGACGGTTCTTGCAGTTGACAATATAAGACGTCTGCAACTCATTAATGGAAACACAGGTCAGATTGATTACCTAACTGAAGCTCAAGTGAGTTGCTGTTGTTTAAGTCCACATCTTCAGTACCTTGCATTCGGAGGTGAAGATGGAGCCATTCAGATTTTAGAACTCCTGAACAACAGAATCTTCCAATCCAGAAATGGGCACAAGACCACTGTTCGGCACATCCAGTTCACAGCTGATGGAAAGACTCTTATCTCAAGCTCTGATGATTCTGCAGTTCAGATATGGAACTGGCAATCAGAGGACCCTTTCTTTCTCCAAGCCCACCAGGAAACAGTGAAAGACTTCAGACTCTTGAAAAATTCAAGACTTCTTTCCTGGTCATTTGATGGAACAGTAAAGGTATGGAATATTATTACCAGAAGAATAGAAAAAGATTTCGTGTGTCACCAGGATACAGTTCTTTCTTGTGATATTTCCTCTGATGCTACTAAGTTTTCTTCTACCTCTGCTGACAAGACTGCAAAGATTTGGAGTTTTGAACTCCTTTCTCCTCTTCATGAATTGAGAGGCCACAAAGGCTGTGTGCGCTGCTCTTCCTTCTCTGTGAACAATACCTTGTTGGCGACTGGAGACGACAATGGAGAAATCAGGATATGGAATGTCTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGATTTCAGTAGAAGAAGGAGCTGCTACTCATGGAGGCTGGGTGACCGACCTTTGCTTTTCTCCAGACACCAAAATGCTTGTTTCTGCTGGAGGATATCTCAAGAGCTGGTACATGTGTCTGTGTCCCCTCAGTCTATACGCTGGTG EMBV3_27646 AGGGGACATAAAATTAGTGATTACTTTGAGCGGCGAGTAGAACAGCCTCTCTATGGTTTA Variant GeneID:534705|TLK2:XM_002696061:381_cdna 411^506 3 EMBV3_06773 GeneID:534705 19 GENE TLK2 NULL tousled-like kinase 2 EMBV3_21137 AAGTATAAACCTTATATAACATAATGCTATTTGATTTCCAGTTTTTCAATGGTAAAAAAC Gene GeneID:522265|SLC30A1:XM_002694265:259_cdna Constitutive 2 NULL GeneID:522265 16 GENE SLC30A1 NULL solute carrier family 30 (zinc transporter), member 1 EMBV3_24200 GAGATGCAGAAAGCCTTCGGGGAGGACCAGCTCTACAGGGTGTACTCGTTCCTGGACTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18742 TGGACCAGTACGTGCACACGGTCAACAGCCGAAGCGACATCATTGACTTCCTGGATGAGG Gene GeneID:510644|MICALL2:NM_001098932:131_cdna Constitutive 0 NULL GeneID:510644 25 GENE MICALL2 MGC160023 MICAL-like 2 EMBV3_03153 TGAGCGCCGGGCTGCGGAGCAGGAAGAGGACTGGAAGGAGCCAGTCTGGAGACAGTCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34753 TCTCCCTAGGCCCAGGGGCCTCTCCCAAGACTTGTTGGAGCGCAGGGACCTGTGGCGGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28763 CCTCCATTAGCTTTCTCTCTCCATCACTACCAAATATGCTTCCGAGTGCCTTACTGGGGG Gene GeneID:100301161|LOC100301161:XM_002687246:78_cdna Constitutive 0 NULL GeneID:100301161 5 GENE LOC100301161 NULL similar to keratin 6A EMBV3_11886 TGGTCTTCGAATTTGCACAGCACCTGTCCCAGGAAATCTTGAGTGATGCCTTGCAGCAGT Gene GeneID:767914|MGC128040:NM_001076991:54_cdna Constitutive 0 NULL GeneID:767914 2 GENE MGC128040 NULL hypothetical protein MGC128040 EMBV3_43565 TCCTGCCTTTGCACCCGTCCGTAGGGTACTTCTCTGTAAACGCCTGCCGTTCCTTCCCCA Gene GeneID:100336523|LOC100336523:XM_002688482:16_cdna Constitutive 0 NULL GeneID:100336523 6 GENE LOC100336523 NULL HtrA serine peptidase 3-like EMBV3_31389 AGCCCACGTGCCATTGACCCCTCTCTTGCCTGCTGGAGAAGATTGATTCTGGTATCTCAT Gene GeneID:280719|AMT:NM_177485:19_cdna Constitutive 0 NULL GeneID:280719 22 GENE AMT NULL aminomethyltransferase EMBV3_06690 GATGTAAGGATTGTTTTTATACATAACAAGCTAATCCGACATTATTACAATCTGAAATGT Variant GeneID:529491|PMS1:NM_001077981:36_cdna 683^922 3 EMBV3_09785 GeneID:529491 2 GENE PMS1 MGC152061 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) EMBV3_11530 TTCTGCTAATTTAGTGCTGAAGCCTATCCACGTTGGTGATAGCTTATTATTTTCGTAAGT Gene GeneID:519736|RANBP10:NM_001098125:273_cdna Constitutive 2 NULL GeneID:519736 18 GENE RANBP10 MGC143268 RAN binding protein 10 EMBV3_30098 ATGGGGTCACACAAAGTCAGATACGACTGGAGCAATTTAGCAGAATGGGAATGTAGAGGG Gene BVV0102_351953 + 0 NULL GK000015.2:25263458-25293298 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12684 TGCGCTGGGTCCTGAGGAGAATTTTCTTTCCATGGATTCCTCCCAGAACGCTTACAATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04239 TTATTGCAAACACCAGAGTGTAAATACAAGTTTCTGTACTTCAAGGAAAATGTGAACTTG Gene BVV0102_192824 + 0 NULL GK000028.2:33588127-33719656 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35671 CTGATCCCATTCGGTACCCATTCCTTTGCTTCTCCCATCCTCAAACTGCCACCTGGAAGA Gene BVV0102_160090 + 0 NULL GK000027.2:7084945-7338935 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22836 TCTGCATGAACAAGCTCGGACACTGGGCTCCTATCCTGGAGTATTACAGTGGCTACAGGA Gene GeneID:100301478|LOC100301478:XR_084146:250_cdna Constitutive 0 NULL GeneID:100301478 X PSEUDO LOC100301478 NULL similar to cyclin B3 EMBV3_04684 GGAGCCTCTGCCTCTGCCCAAAATCGAAAAACCAAGCCAGGAGATGGTGGACAAATACCA Gene GeneID:529893|AWAT1:XM_002700029:122_cdna Constitutive 0 NULL GeneID:529893 X GENE AWAT1 DGAT2L3 acyl-CoA wax alcohol acyltransferase 1 EMBV3_19742 CGCGCTGCAGACTCGCTTAGGGAGGCACGGCTTTCTCAGGCGCCTTCCGTTCGGGAGTAA Gene GeneID:512154|PASK:XM_002686621:147_cdna Constitutive 0 NULL GeneID:512154 3 GENE PASK NULL PAS domain containing serine/threonine kinase EMBV3_36444 GGGAAGAAAAAGAAGAGGCTCCGTGTTGACAAATGGTGGGGAAACAGAAAGGAACTGGCC Gene GeneID:789606|RPL9:XM_002691661:406_cdna Constitutive 0 NULL GeneID:789606 11 GENE RPL9 NULL ribosomal protein L9 EMBV3_35359 ACGGCGTTCGGTTTAAGCGGATATCAGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA Gene GeneID:535197|MARK2:NM_001102182:63_cdna Constitutive 0 NULL GeneID:535197 29 GENE MARK2 MGC140219 MAP/microtubule affinity-regulating kinase 2 EMBV3_34399 GGCATACTGTCACTTAGGTTTCAAGCAGCAAAATAAACAGTGCAGCTCAGAAATTGTAGT Gene GeneID:782101|COPS2:XM_002691476:354_cdna UTR3_Alt 1 NULL GeneID:782101 11 GENE COPS2 NULL COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) EMBV3_24202 AGATATCGTAGGCCCAAGTACACTGGTCAATAACATCTGGAAGCTCATCCGTGCCAGGCC Gene GeneID:337900|PAG6:NM_176617:16_cdna Constitutive 0 NULL GeneID:337900 29 GENE PAG6 NULL pregnancy-associated glycoprotein 6 EMBV3_35502 CAACTCTGACCCTACACCATGTCTCCATTCCTCCCCAAATTATTGCTGATTTGTGCTGCC Gene GeneID:539519|MLLT11:NM_001076169:142_cdna UTR3_Alt 1 NULL GeneID:539519 3 GENE MLLT11 MGC140745 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 EMBV3_40984 GCCACTGCACCATTTTAGATCTTTATCCTCCAGGGCTACAATTCCAGGCAAAGGAAAGAG Gene BVT0102_079043 + 0 NULL GK000019.2:14593420-14626319 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092363 1 XLOC_056873 Coding TCONS_00092363 XLOC_056873 Coding Coding EXPI 19:14614440-14616384 = TSS69527 402 1 TCONS_00092363_1 83 3 0.794647452393206 0 0 0 0 0 0 0 0 0 2.047011158254e-05 5.69448106247873e-06 0 0 0 0 0 0.000123897755182336 0.00533650534149828 0 0 0 0.000738375826817197 2.28209344087357e-05 0.00248133167698232 0 0 0 4.77869671592819e-05 1.20761611498377e-05 0.000815093262438143 NM_001205278.1 WFDC18 Bos taurus extracellular proteinase inhibitor (WFDC18), mRNA. 5e-127 457 100.00 0.626865671641791 NM_007969.4 Wfdc18 Mus musculus WAP four-disulfide core domain 18 (Wfdc18), mRNA. 3e-22 109 70.25 0.597014925373134 TCONS_00092363_1 sp|P62811|WFD18_BOVIN WFD18_BOVIN WAP four-disulfide core domain protein 18; 1e-22 85.9 54.55 0.91566265060241 1 noncoding 0 0 0 0 -0.0595590280518571 0.677835097472288 -0.010106221920437 0.826417616568774 ACCACACCAGAGGCCAACATGAAGACAGGCACCGTCTTTGTTCTGCTGGCTTTCCTCGTCATGGGGCTGGAGGTGGCCTGGGCTCAGAAGTCTCCTGTCAAAGGACAAAGGAAACCTGGATTCTGCCCAGAGGTGCCCAAAGGTACTGTGGGAATTTGTGCTGAACTGTGCTCAGGAGATTATTCCTGTCCTGGGAGAGCGAAATGCTGCAGCAATGGGTGTGGTCATGTCTGCAAAGCTGCTGTCTTCAAAATTCGATGCTTGGCATAACAAGGCTTCCATATCCATTCCTTGCTCTTTCCTTTGCCTGGAATTGTAGCCCTGGAGGATAAAGATCTAAAATGGTGCAGTGGCTGCTTTCTAAAAACACTTGTGTTCAAAATAAACTAAATCTGTGGCATA EMBV3_14530 CCTTGGATTCAACTATATCATTGGAGGCTCGTACCGTTGGCTACCCAGCAGGAGAGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18320 TGCAGGTCATCAAGAGCCGCTGCCACTGGTCCTCCATATACTGACCCCGACTATGTTCTA Gene GeneID:510688|LRRC33:NM_001034391:69_cdna Constitutive 0 NULL GeneID:510688 1 GENE LRRC33 MGC128655 UNQ3030 leucine rich repeat containing 33 EMBV3_35456 AGCCTCGTTGCGCCTTCCACACTGTGCGCTGGTTCAACTGCACCAGTAACTGTTTTCAAA Variant GeneID:613523|EAF2:NM_001046507:95_cdna 152^246 1 EMBV3_39680 GeneID:613523 1 GENE EAF2 MGC137120 ELL associated factor 2 EMBV3_28580 CCCTTGGATTATATGGGACTTTTCCTGAGTCAGTATTCAAATCTGGAGAGAAGAACTGGG Gene BVT0102_331528 - 1 EMBV3_33813 GK000008.2:29504030-29522479 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224806 TCONS_00224811 TCONS_00224809 TCONS_00224805 TCONS_00224807 TCONS_00224804 TCONS_00224810 TCONS_00224814 TCONS_00224808 1 XLOC_137639 Coding TCONS_00224806 XLOC_137639 Coding Coding FREM1 8:29300061-29506995 j TSS168499 11403 1 TCONS_00224806_15 1347 0.00666491274226081 36 0.945069176979989 6.41374087181126e-07 0.000501457554979977 0.000349034417373295 0.00020074632062736 0.000391753469081085 0.000287159101371648 0.000432080203646317 0.000629379780541586 0.000938264201628392 6.10026228167413e-05 7.98480133053912e-06 2.66532931424848e-26 7.32933568867158e-05 0.000150896480610501 1.84511160107752e-05 3.86154807867801e-37 1.82889541267962e-24 9.16651894623782e-43 0.000370434563720434 0.000351455816120266 5.97467458920236e-05 2.40406913899107e-05 4.21112529707476e-42 2.56033768505552e-18 0.000782387610991236 1.28759838774617e-08 0.000262660201247935 3.16306560819006e-13 5.00389309156467e-09 5.89263601342215e-09 XM_005209921.1 FREM1 PREDICTED: Bos taurus FRAS1 related extracellular matrix 1 (FREM1), 0.0 9097 100.00 0.442252038937122 XM_005251382.1 FREM1 PREDICTED: Homo sapiens FRAS1 related extracellular matrix 1 (FREM1), transcript variant X1, mRNA. 0.0 5021 86.23 0.372884328685434 TCONS_00224806_15 sp|Q5H8C1|FREM1_HUMAN FREM1_HUMAN FRAS1-related extracellular matrix protein 1; 0.0 2306 84.50 0.985894580549369 0 coding 1 0 1 1 -0.0511723400364681 0.698515805073813 -0.0110705220533555 0.912110227756853 CTGAAAATTTGTCATTATTTTATAGGTGGATTTGAAAAAAATCCTATATATTTTAGTGTTTTCTTCCTTCTGTCTATTTCTCTGATAATTGTTGTTGGACATCTCTCTGGGTTTTCTATTTTTTAATTTTCCCCTTTTACAATTCACTTTGAGTATGTTTCTCTTGAGCTGAAATCCGCAGAACCTGGAGACAGGTGAGCTGACGTTAGTTTAGCCTTTTATTAAGGCTAAACTAGGAACTGGGAAGCAGAGCTCATTTCCCCAGCCTCCACCAAGAATGGAAAGGGCTCCTGAGGGCAGGTGGAAGCTATTTTCCACCAGAAGACTCAAGGTCACTGGGATTTCTCCTTACCCTCTGAACCCAGGGCCTCACGACCCCAAACATCGGGTTCAATTTTAAGAGGATATGAGGTTTCTGGAAGGCTGAATAGGTAATCCTTGGTCCTTTGACATCTGTGTAACCTTTGATGTTTGTGTAACTAAAGGCTTGGCCTTCAGTGAATTTTCTCATTGCTTAAACCTCTGGATGCTTATAAAGTGAGTGTTTGTGTGTATATATATGTTTTTATGATAGCAGTATTATACTTGCAAATTTTGAAAATTGAGTATCTTCATGGGTACAAAGGAAGGAACCCAGAATGGTGGTAGGTGAGCATTGCCACAGTCGAACTCCCTTCCTAAACTTGGTCACCTTTGAGAAGCCAAAGTTGGCTCTCAATAAGAGTTGAAGCAAAGGCCTTTGTTTTACTCTAAGCCCATTCCAGAAATTCCCTAAACATTCCCCCCAATACTCTGCATATGGAAAAAAACAAGGTGGGTTGGGAATAAATACTGCTGGTTAGGAGAAACAGAGACCATCCTCTTCCTCATGAGGATGTGGTCATGTGAGAACTAATTCATTTTCTCTAACTGCATTTCTTTGAAGAATCTTTTGCTAGAGGTAGGGGTTGGAGGAGAATTTGCTAGTTCACCCAAGAGACGGAGTCTGGGGCTCTGGTGAACATGGCATTTGGCCTGGGCAGCCCTGGTTTAGGCTGTCGAGGCTTAGCTAGGGACACAGACTCCAGGGGAGCATGGAACAGGGTTGCTTCAAACATAGATGGTCATTCTGTGTGGTCTCTGTGACCAGCATTATCATGCTTGGAGCATTTAGACCCTTAGGCTGCAGGATGTGGTCCTCAGCCCTACCTTTGCTCCAAGAAGAAAGGAGTCCTGTCATTGCAGCAACTGGCATATTTGGCTCTGCTGGATCCTCCAGTTCACTCAAGGAGGAACTCTCTTTCCTTGAGTTAGTTTTACACCCAAGTGCCACTTTCTTCCTTAGAATGTGACCATAGATGGATGTTACCTTGGCCCATAGAAGCAACTCTAATATCTGGTAGGCCTGGGCTGGGCACAGAGGTGGCCATTGTTAAATTTTTGAGCTGTAGCTCTTCGTGTCCCTTCTCTTTCTTCCAAGGATGAAACCTCAAACAAATGCCTCCTGCTATTTTAAAATTTATTCTTTGATGGAAACTCTGGAGGATCTGACTGTCAGGTCGTGCTTTCCTTCCTACAAGTCTCTCCTTGAAGCTTTCCTTCCTACATGTCTCTCCTTGAAGGGCTCTATTTTTTAAGAACAGACTCTAGAAACTGATGTTGTCAGCCATGGTAGCCCTGGGACCTCATGGAAAGAAGAGATGAAAGACAACCCTGTAACAGCTGGAGATTGAATAGTAGAAACTTACCTTTTGAAGCTCCACTTCGTTCTTCCCGCCTCTGCATTGATGCCAAAAAACAAAATGAAAAACTGCGACCCAGTATTCAGTCTTCTCTTTGTAAGATTAAAAAAGCACTTGGGAGGTATACATTAATCTTGCTGGCGTTGTCAGAAGTGATCAGCGAGTTTTATTAAAAGCTCTGGGACTGCCTGAAAGACCTCCTTGTCTGAGTTTGAAATGAAAGGGACATGTTAAGATCTTGGGGCACGTTGTCAGGACCCTTCTCCCTGCCCCTTGGACTATGAGCTGACACCCCTGGAGGAAGCTGAGAAGCCCTCCTTTGTTGAAGGGATTTCCCTGGTGAACGGAAACGACTTGGCCCCTGTTGGCATGAGCTCTCCAAGCTGGGGTGGGCTTGGTGCCCTGCTCCTGCTGCTGCTGCTCCCAGGCTGGGCCAGCCCCACCTTTGTCCGTGTTAACCAAGGGGTCAGGGTGATGAAGGGCAGTTCCGCCTTCCTGTCTCAAGATGACCTGAAGTTCACCATCCCCAAAGAGAAAGATGCCTGCAAAGTGGAAGTCGTGATGAATGAGCCAATAACCCAGAGGGTTGGGAAACTCACTCCACAGGTCTTTGACTGCCATTTCCTTCCCAATGAAGTAAAATATACTCATAACGGTTGCCCAATTCTTGATGAAGACACAGTGAAACTTAGACTTTACAGGTTTACTGAGACAGACACCTTCACGGAAACCTTTATCCTGCGGGTCTACCTCCTGGAACCAGACTGTAACATCATCCGCATGAGTGATAATGCACTGGAGGTGTCTGAGTTCTATGGCCTGTCCCGAGTCATTGATAAGAACCTGCTTAGATTTGATTATGAGAGGATGGCCAGCCTGGAATGCACAGTCAGACTGGACCCTGTGGGAACTCACCTGCCAGCCCACGGCCAGTTGGTTCTGGTGGAGCCCCAGCTGGAAGAACCTCGCGGAGATCAGCCACATAGTTTCTTCCCTGAGTCTCAATTGGGAACAGAGCTGAAGTGTCCAGGCGGCAGGTGTACCCTGGGACTGAAGAAAGTCGGAAGTCTCAAAGTGAGCTGTGAGGAGTTCCTGCTGATGGGGCTTCGATACCAGCACCTGGGTTCCCCTTCTCCCAACATTGATTACTTCTCCATCCAACTGGACCTCACAGATAGCAGGAGTAAAATCTCATACAAGTCAGAGAGTGCGTGGTTGCCTGTCTATATCAGACCTGGAATTCCCAATCAGATTCCAAGAGCTGCATTTATGGCCATGTTTATTCTGGAAGTGGATCAGTTCATCCTGACCTCATTGACCACATCGGTTCTGGACTGTGAAGAGGATGAGACCCCCAAACCCTTGCTGGTGTTCAACATTACTAAAGCCCCACTCCAGGGCTATGTGACTCACCTGTGGGATCACACCAGACCAGTGTCCTCCTTCACCTGGAAGGATCTAAGGGATATGCAGATTGCCTATCAGCCACCAAACAGCAGCCATTCTGAGAGGAGACTTTATGAGGTGGAGTTGGAGGTCTATGACTTCTTCTTTGAGAAGAGTGCACCTATTACAGTCCACATTTCCATCAGAACAACAGATACAAATGCCCCGCGAGTGTCCTGGAACACAGGTCTGAATCTCCTGGAGGGACAGTCTAGGGCCATCACATGGGAACAGTTTCAGATTGTGGACAATGATGACATTCATGCTGTCCAGGTAGTCACTGTGGATGGCCTGCAGCATGGACGGCTTACTGTGAGAGGGGGGAAGGGGTTTCTCTTCACCGTGGCTGACCTTCAGGCTGGAGTCGTTCGATATCATCATGATGACAGTGACTCCACCAAAGACTTTGTGGTCTTCAGGATATTTGACAGCCAGCACAGCATCCAACATAAGTTTCCCATCAACATCTTGCCCAAAGATGACAGTCCGCCATTTCTCATAACAAATGTTGTGATTGAACTGGAGGAGGGGCAGACCATACTAATCCAGGGTTCCATGCTGAGAGCTTCAGACATGGACTCCAGTGATGACTACATCTTCTTTAATATCACGAAACCCCCACAAGCTGGAGAGATCATGAAGAAACCAGCACCAGGACTGATAGGCTATCCAGTCCCTGGCTTCATTCAGAGGGATCTATTCAATGGTATTATTTACTATCGTCACTTTGGTGGAGAAATCTTTGAAGATTCATTTGAATTTGTCCTGTGGGACAGCCACGAACCTCCAAATCTCTCAGTGCCACAGGTGGTGACAATCCATGTCACTCCAGTAAATGACCAGCTTCCAAAAGAGGCTCCTGGAGTTTCTCGGCATTTAGTTGTCAAGGAAACGGAGGTGGCCTACATCACTAAGAAACATCTACATTTTATAGATACAGAATCACAAGACAGGGAGCTGCTCTATACAATAACCACTCCTCCATTTTTCTCCTCCAGCCGCAGACACTTAGATGCTGGGAAATTGTTCATGGTGGACAGCATACCAAGGCTAACCAAGACTCCTGCAGCTCCAGGGTTAAAGTATTTCACGCAGCACGCTGTGAACCATATGAAAGTGGCCTACATGCCACCCATGCAAGATGTAGGTCCGCATCCAAGACACGTCCAGTTTGCCTTTTCCGTCAGTAACCAGCACGGTGGGACGCTGTATGGGATCTGCTTTAACATCACGATTCTTCCGGTGGACAATCAGGCCCCAAAGGTGTTTACCAAACCTCTGAGAGTGGCTGAGGGAGGTCAATGTGTCATCAGCACACAGCATGTCCTGGTTTCTGATGAGGACACCAAACTGGACAACATCTACCTCTCCTTGCAGAGTCCACCTCAGCATGGAATGGTGGAGCTAAATGGATTCCCTCTAAACAAAGGGACCACGTTTCCTTGGGGAGTCCTCCAGGCCTTAAAACTTAGATATCAGCATGATGGATCCGAGGAACTTCAGGATGACATAGTACTGCAGGTCACAGATGGCACAAACACAGCTGAATATGTCCTACACGTTGAGGTGTTCCCTGTAAATGACGAGCCACCAGTGCTAAAGGCGGACCTCATTCCCATGATGCATTGCTCCGAGGGGGAAGAGGTTGTCATCACTTCTGAATACATTTTTGCTACTGATGTGGACAGTGATGATTTAAAGCTGATATTCATGATTGTTGGAGAACCTCAGCATGGGACCGTAAGGAGAGCTGGGGTCACAGTACATCAGTTCTCTCAGGAAGATGTTGTCGCAGGGGCTGTGACGTACAAGCACACAGGTGGTGAGATTGGCCTGATGCCTTGTTTCGACACCATTACATTGGTGGTTTCGGACAGAGAAGCTGGTCCTTTTGTGAATGGCTGCTGTTACAATGGACCTCATCCATCTGTTCCTCTTCATGAGTCTTTTCCAATGTATGATCTCAACATCACAGTGTATCCAGTGGATAACCAACCACCTTCAGTTGCCATAGGTACCACATTCGTTGTAGATGAGGGCTTCTCAGCAGCCCTTACTGTTAACCATCTGTCTGCCACTGATCCTGACACTGCAGCAGATGACTTGGAATTTGTTTTGGTTTCTCCTCCCCAGTTTGGCTACCTTGAAAACACACTCCCTTCTGCAGGTTTTGAAAAGAGCAATATGGGCATCAGCATAGCTTCGTTTCAGTGGAAAGACATGAAGGCTTTACATATTAACTATGTGCAGTCCAGGCATCTGGGGATGGAACCAACGGCTGACAAGTTTGTGTTGTATGTCACTGATGGGAAGCGACGCTCCATGGAGATACCATTTTACATTATAATCAACGCTACAAATGATGAAGCTCCTGATTTTATAGTGCAGAATATTACTGTGTGTGAGGGTCAGATGAGAGAGCTGGATTCTTCCATCATCAGTGCTACTGACCGGGACATTCCCAAGAACCCCTTGCTGTTCAGTATCACCCACAAACCGCGTCATGGCCTCCTCATCAACAGGGCATTTAGCAGAAACTTTTTTCAATATAAGCAACTAGCCAACCCTGGCCAGAAGCATGAACTTGTCTACAACTTTTCCATGGAACTTCTCAAGAATGGAATGAGGTTGGTGTATGTGCATGATGATTCAGAGAGTCTTGCTGATGACTTTACAATCCAGGTGTCAGATGGGAAACATAAGATACTTAAAACCATTTTTGTAGAGGTCACCCCAGTTAATGATGAGAAACCAATGCTGAGCAAGAAGGCTGAAATTACAATAAATATGGGCGAAACTCGTATTATTTCTAGTGCTGTTCTCTCAGCCATAGATGAAGACTCACCCAGGGAGAAGATTTACTATATATTTGAAAGAATTCCCCAAAATGGGCAACTTCAACTTAAGGTGATATTGTCATCCTGGCAAAACCACTTGTGGTGTCTAAAGGTGACAGAGGTTTCCTGACGACCACCACTCTCCTTGCTGTGGATGGAACAGACAAGCCCGAGGAACTTCTCTACGTCATCACCTCCCCGCCGCAATTTGGCCAGGTTGAGTACGTCCGCTATCCTGGGGTCCCCATTACAAGCTTCAGCCAAATGGATATAGCAGGACAGACAGTCTGCTATGTAGATAAGAGCACGACAGCTGTCCACAGAGACACGTTCAGATTCATCGTCAGCAATGGACTTCAGACCAAGCCTGGGGTTTTTGAGATCACACTGGAGACTGTGGACACAGCCTTACCCGTGGTGACCAGGAACAAGGGGTTGAGACTGGTTGAAGGGGCCACGGGCCTGCTCTCCCCTGACCTCCTGCAGTTGACTGACCCTGACACTCCAGCCGAGAAGCTCACCTTTCTTCTGGCCCAGCTCCCACGGCATGGCCAGCTCTACCTGCGGGGGATGGCGCTGATCCCACACAATTTCACTCAGCTGGACGTGGACAGTGGGCATGTGGCCTATCGGCACTTGGGAGGGGATTCTTGGACTGACCACTTCACTTTTGTGGCCACGGATGGGACGAACCATGGCTTTCTTGTGGATGGGAGAGTGTGGCAAGAACCTGTATCATTCACCATCCAGGTGGACCAGTTGGACAAAGCGGCCCCCCGTGTCACACACTTGCATTCCCCTTCTCAAGTAGGGCTCTTGAAAAATGGTTGTTATGGGATTTACATCACCTCCCGTGTGTTGAAGGCATCAGACCCCGACACTGATGATAATCAGATCATCTTTAAGATTTTACGAGGCCCCCAACATGGGCATCTGGAGAACTCAACGACAGGTGAATTTATCCATGAGAAATTTAGCCAGAAGGATTTAAACAGTAAGACCGTTCTTTACATCATAAACCCATCTTTGGAAGTAAATTCAGATACCATGGAATTTCAAGTCATGGATCCCACAGGGAACTCTGCCACTCCTCAAAGTTTGGAACTGAATTGGTCTTATATTGAGTGGTCGCGGACTGAATATGAGGTCTGTGAGAATATGGGCATGCTACCCTTGGAGATTACCAGAAGGGGATATTCCATGGATTCAGCCTTTGTGACTGTACAGGTCAACCAAGTGTCAGCTACAGTTGGAAAGGATTTCACCATGACTCCATCTAAGCTGGTGCAGTTTGACCCAGGAATGTCAACTAAGATGTGGAATATAGCAATTACCTATGACGGATTAGAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCCGTGAATGCGGTTCTTGGCACAAAGACAAAAACTGCAGTGAAAATTTTGGACTCAAAAGGAGGGCAGTGCCATCCTTCAAATGCCTTCAATTCAAACATGCCCAGTGCATGGGAGAAGGGCATTTGGCACCTGCTCTCCCCAGGGGCTTCCTCACCCACCACTTCTGATTCCTTTCATCTGGAAAGAAGACCCCTTCCAACTTCCAAGCAGCTAGCGGTCACCAGGGGTGACGCCCTGCGGGACTTTGGTTCTGAAGATCTTTCTCCAGTGAAGCTTAGGACCCGAGGGGATGGCAAAACAGTTCCTCCATCCTCTGTTTATAAAAATAGAACAGACATCATCTATAACTATCATGGGGTGATTTCCCTGAAACTGGAAGATGACGGCTCCCCAGCTCGCAGAAGGAAGGCCAATGTATCCTTTATTAGTGAGCCCCAAAAGACAACCAAAGTGGCAGAACCGCCTCAAGCCGATAAGGAGGAATCCACAACCGGCTCACACTTCCCCAGACAGGACCCGTTGCCCTCATTCCCAAAGAACTGCACACCGGAATTAAAGGGACTCTTCCACTTTGAAGAAAGCCTCCAAAAACTGTACAAGTGCGATGGAATTGCCTGGAGATCCTGGAGCCCCCACACCAAGGAGGTGGAAGATAAATCCTGCCCAGCTGGGTGGCACCATCATTCAGGCTACTGCCACTCCTTGATCACAGAGCAGAAAGGCACGTGGACTACAGCTGCCCAAGCTTGCAGGGAACATTACCAAGGCAGCCTTGTAACTGTCATCTCCAGGCAGCACATGAGATGGCTTTGGGACATCAGTGGAAGAAAGCCGTTTTGGATAGGTTTGAATGACCAAGTGCGTGCTGGCCACTGGGAGTGGATTGGCGGTGAACCTGTGACCTTCACCAACTGGAGGAGAGGGCCCCCGCAACGTTCAAGGCATGGCAAGGACTGTGTTTTGGTTCAAAGGCCAGGAAAATGGCACACAAAGGACTGTAGGAAGGGAAAATCTCACAGTTATGTGTGCTCCAGGAAACTCTAACTGGCCCTACAAGTATCCACTTGGGATGTTTTTATCTATTTATTTCCAGGATTTGTGCATAGTACTCAATAGAAAACAGAGTGTCACGACTGATGAAGTACATTTCTTCTATCAAAGTGTTTGAAGGATTCTATCTAGTAAAGAAAAACAATAGTTCCAGGAAGATTGATAAATGAATGTTTCTTAGAGGAAAAGTTAAATTTTTTGCATCTCAGTACATTTTGAAATAAATCCTCAAGGTATTATGTGGTATAAATTTGGTTATTCTGGAGACTTCATATTTCAGTCAACAGTAATTTCATGGTCCTTGGATTTTTTTTCCCCAATACTTCAAATGAACACATTCTGAAATCTATATTGCAGGTGCTTCCACCACTTCCATCTGAGTGAGGCTTACCCTGCCAGTTCATTAAATCAAGGTTGAACTGCAAAGGGTTGCTTTGTCCCTTTGGAGTCCTTTCAAATGTGAAAGCTGAGAGGCTGTGGATAAAAAGGAGAATTCTCTGTGGTGAAAAAGGAAGGCTTTAGATGGAAGAATCTGGCAGATGGAAGTTCATCTGCAAAGCTGTAGTTCAGGTAAGAATTCAGGGGTTACCTGTCCTTCAGAAGTCTATCCATCACTTCCCACGAGACAGAGCTCCTTTTCCAGTAAGATGGTTGTGCCATTCTAAAGCGAATAATTGGGTTTCCCCAGCTTTACAGATTCAGGAGACATTTGAAGCAACATGAGCCTCTGTTCATCCGTGCTTGTAGCACTGAGTAGCATTTCTCAAGGACATTTGGAATAAAAAGCATATATGGATGATGGTTAACATATGGAAGAAAAATATGGCTTCCTCAAAAGTGTCCCAATGAACTTTGCAGATGAATAAAGAAAAATAGTACTAAAAACAGAGTCCTTGAAAGCCTATATTCTCAGAAAGGATTTTGATATAATTTTGAGTCCTTAAATATTTAATATGTGTAGAATTGCCATGTTAACCTGATCCTCTAATGAAAAGGTACCTTATTAATTTATAATGGCAGCTGAATGAAACATTTTTGTAGCAGTAAAGCATGTTGCAGCCTTACAAGAACTCCCTTCTGAAATCAAAACTTAATTACAGGAAATTAGAAATTTATTTCTGAAACATTTACTCACAATTTTCCTCTTTTCATAATCCCTGAAAAATATGGTTGTGTCCCATGTAACTTGCTATTATGAGTACCAGAGTCACTTCAGAATCAAAACAGAGCTACCAAGCAGATCGAAGTTTTGGTGTGTATTTTATTATAATAATACCTTGAGAGAAACTAAAAGTGACTAAAGAAATTCAGTCTCATTTTTTGGATATAAAAAACAAGCGTGTTTTATTTGTACTTGTTTATCAAGATTTTGGTTAAAATAAACATTTACAAAGACAGATTGGAATGAGATTTAGACATTCTACTTCTTATAAAATTCCAACATCAGTGTGGAGTCAGGAGGCTCCTTACCTTAGGTATCACAAGTAGAATCTGAATTGCTCTGATATAGAGGTCTTCCATATGACACAAGCAGTTTCTGGTGTTGAATCAGAAGGTGTAAACCCATTTTCTGTATTAGTTGATGGCCCTTCTGATCCATGGGCCTCTGCAATGTTGAAAGATGGGATGCTGAATAAAGAAATAAGGAGTTGTTTACCTGAAGGATTGTGTCCTAGGACGCAAAGTAAATGGTCAAGGAATGAGGAATTCCTAGATCTGTATTGACTGGAAATCCAGAACCATGGCAACTGTGTAAACCTAGTCAGCGTGGTAGGTTTTATTATACATTTCTGCCGTGTCAGTGATATTAAAATGTAATTGCAAATGTTAGCACAAAGAGAGAATGCTTTGATTTTTATAGCAACTGAAAGAAATACTAGAAGAATGTTTAAATCATTCCTGGTCATGAAAACATTAATCAAGTGGTAAAATCCAACTAACTGGAAGAAGGTACAAATAAAAATTCAAGCAAGTGTGGGTGCTAAGCAATATGTGGGTGCATGACCTTCATCTCCTTCTCATGACTGGGCTTTGACTGGTGGGGGAGTAGTAGTAAATGATCATCATGGTTCTCTCCACCTTGATTGATTATTGTCATCCTTTAGGTTACGGTGGGAGTGGGAAGGAAGGAAATGGAGTAATGGTAATGATAGAATGGGAAAGGGAGATGATAGATAAGGGCAGAGTGGAGAGAAGGATTGAGTAGGAAGAGATGGGAGTTGATAGGTAGCTAAGAAAGACAGAATCAGAAAGAAAGACTTGAATGTCACCCAGTTCTTCTCTCCAGATTTGAATACTGACTCAGGAAAAGTCCCATATAATCCAAGGGCATTAACCTAGCTCAATAATGTATAGCTCTTCAGAATCTTGTGACTGTTGGTCTTTAACAAAACATACATATATGTAGTATAAATCTGCTAAACATAAACTCAAAAACATATGACAATTATTCCATCTTCTTCCAAGGGGTGGTAAAAATGAACCAGGTGGTATTTATTTACATTTTTGGGGTTTATTTTTAAGACAGCCAAAAAGAATATGCACATATTTAACAGTATGGTTCTGTATAATTTAAACCATATACTAGTGCTGATTAATTTCTGTGACAAAGCAGCATATTAATTGTACTGTACCTACTGTTATACCAAAATTAATAAAATAAGCTATTTCTAGTTCTGAATTACTACTCCTTTAGTGTTTAACATTTTATATTTATTTTACCCATTGAAGAAGAAATGGAGAAAAAAACTGAACATGTATTTTTCATCCTTACTATTTGGATCAGCCTTTCATTTTATAGCTTCCATCCATTTATCCATCCATCCAGTCATCCATCCACCATCCATTCAACAAATATTGACTGTGAAGTGCCTGATACTGTTGTAGATACTGGATATATGTAGTGGATGAGATAGAAAGTATAAAATCATGGTATGTATATATAAATTTCTAATAGTTGT EMBV3_41615 GCCTTGCCTGGTCTCCTCTGAACCCACCTCAGTCCCAGATTTGGCTGCATCTTGAATTAT Gene GeneID:530776|LASS5:NM_001102132:86_cdna Constitutive 0 NULL GeneID:530776 5 GENE LASS5 MGC159488 LAG1 homolog, ceramide synthase 5 EMBV3_18450 TGGCTGATTTGCCACCAAAGCTTCAAAAGATGGCAGGAGGAGCAACCAGGATGGAAGGGA Gene GeneID:526088|KCNJ3:XM_002685350:222_cdna Constitutive 0 NULL GeneID:526088 2 GENE KCNJ3 NULL potassium inwardly-rectifying channel, subfamily J, member 3 EMBV3_41420 CAGTTCCCAGGTTGAAAGTGTTCAGGGGAGAGATAGATTGGGAGTTTGGGACCGACTTAC Gene BVT0102_049616 + 0 NULL GK000007.2:65848442-66383162 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217517 TCONS_00217520 TCONS_00217521 TCONS_00217522 TCONS_00213986 TCONS_00213991 TCONS_00214000 TCONS_00213987 TCONS_00217518 TCONS_00213988 TCONS_00217519 2 XLOC_131529 XLOC_130585 Coding TCONS_00217521 XLOC_131529 Coding Coding - 7:65953194-66432973 - TSS161966 2310 2 TCONS_00217521_2 92 0.775324675324675 5 0.995195694675454 0 1.43538286325692e-51 0 2.71872650618238e-05 0.000415284852567644 7.76249682663171e-21 7.17335860256095e-05 5.3237735343997e-63 2.8147180363867e-97 1.8681776527959e-17 8.57974027652318e-175 0 0 1.91403545006413e-298 1.00411945357654e-182 0 0 0 0.000189421093761404 3.82642693340312e-207 6.92710902472331e-308 0 0 0 0.000401275177379373 6.28780430425146e-05 6.37884036240016e-06 0 0 0 XM_001788594.4 LOC538808 PREDICTED: Bos taurus kinesin family member 7-like (LOC538808), 5e-161 572 73.53 0.43030303030303 NR_034022.1 LOC100131257 Homo sapiens zinc finger protein 655 pseudogene (LOC100131257), 5e-60 237 67.15 0.343290043290043 0 coding TTTTTTCCAGTCTGCTCCTTGGGACTTGGAGTCTGCTTGTCTGTCCAGCTTCTCCCTCGGTGCCCACAGCGTGCTTGCCTCTTCAGTGTCAACACCAGGGGGTTTGGAGGAAGAACCTACAGAGTGTTTTTGATGATGCTCCTCACCTTATTTTGTGACTTCACTTTCTGAAGAGAAAGCTCTGGCTTTTGAGGAATCCACTTGTAGACTCGGACTGTGTGTTGTCAGCCACTTTCTGCTAGCTTGGAGCAAATGTGTGGACCTTCTGTTTTGGAGACAAGCTGTTGATGGAGTCAAAGAACTTAGGACGAAGGGTGGCAGCTGAGGAAAGAAGCACAGATCACAGATGTGAAAAAAGGCTCATCAGAACCTTAATAGATGAAGCCAAAGAAGATGCAGATGCTGGGAAAGCATTCACTATCATCTTTTTTAACTATGGAGAAGGAAATGGCAACCCACTCCAGCTGGAGAATCCCATGGACGGAGGAGCCTGGTGGGCTACAGTCTACGGGGTCGCAAAGAGTCGGACACAACTGAGTGACTTCACTCACTCACTCACTCTTTAACTATGGTTGACAACTTTTTGTAATTTTTTTAAAAATCACTTTATATTGTAGTTGATTAACAAAGATGTGTTACAAAAAAATGATTCAGTTACTTTTTAAATCATTTTATATTGTAGTTGATTAACACAGATGTGTTACAACAAAGGGATTCAGTTACACATACACATGTATCTATTCTTTTCCCATTTAGGCTATTAAACAGTATTGAGCACAGTTCTCTGTGCAATACACTAGGTCTTGTTGGTTATTTTAAATATACCAGTGTGTGTAAGTCAGTCCCAAACTCCCAATCTATCTCTCCCCTGAACACTTTCAACCTGGGAACTGTAAATTCATTTTCTAAGTCTGTGAGTCTGTTTCTCTTTTGTAAATAAGTTCAATTGTATCATTTTGTTTAGATTCCACATATAAATGATATTATGTGATATCTGCCTTTTTTCTGTCTTTCTTCACTGGGTGTGATAATCTCTACATCCATTCATGTAGCTGCAAATGGCATTACTTCATTCTTGTTTGTGGCTGAGTAATATTCCATTGTGTATGTATACGACTTTTTTATTAATTTATCTGTTGATGGACACTTAGTTCGCTTCCGTGTGCTAGCTATTATAAATACCACTGCAATGAACACTGGGATGCATGTGTTCTTTAGAACTATGTTTCTCTCTCTGATTATATGCCCAGGAGTGGGATTCCTGGATCATATTATAGTTCTATTTTTAGTTTTTAAAGGAATCTCCATACTGTTTTCCATAGTGGCTGCACCAATTTACATTTCCACCAATCGTAGGGGATACCCTTTTCTCCACACCCTCTCCAGCATTTACTGTCTGTAGACTTTTTGATGATGGCCATTCTGACTGCTGTGAGGTGATATCTCATTGTAGTTTTGATTGGCATTTCTCTAATAATTGCAGTGTTGAGCATCTTTTCTTGGTCACTTGTATGTCTTCTTTGGAGAAATGTCTACTTAACTCTTCTCATTTTTTAAATTTTGTTTGTTTTTTTGTGTGTTTGATATTCAGCCTGAAGAACTGTGTGTAAATTTTGGAGATTAATCAGTTGTCAGTCACATCATTTTCAAATATTTTCTCCCATTCTGGGGTTGTATTTTTGTTTTGTTTCTGGGTTTCTTTGCTTTGCAAAAAGTTTATGAGTTTAATTGGGTCTCATTTGTATTTTTTGTTTGTTTCCAGTACTCAAAAACACAGAGCAAAAAAGATATTGCTGTGAATTATGTTGAAGAGAGTTGAGCTTGTTTTCCACAGAGTTTTACAGTATCCAGTTTTATATTCAGGTCTCTAATCCATTTTGAGTTCACTTTTGTGTATGCGGTTAAATAATATTTTAATTTCATTTTTTTACATGCAGATATCAAGTTTTCCCAGGACCATTTATTAAAGACTATCTTTTCTCCATTAAAAAAAAAAAATTGTTCTAGTGAAAAAAATTGTTCTATGAAAGAAAAATGCAATTAGTAATCTGATAGGGATTCCAATGAACCTGTAGATTGCCTTGGGTAGTATATTCATTTTGACTATATTGATTCTTCTGATCCAAGAACATGGTATATCTTTCCATCTGTTTCTTCCACCTTCATTTCTTTCATCAATATTTTTTAGTTTTTGGAATACAGGTCTTTTGGCTCTTTAGGTAGGTTTATTCCTAGGTGTTTTATTCTTTTTGATGTAATGGTAAATGAAATTGTTTAATTTATCTTTCTGATCTTTTGTTGTTAATGTAT TCONS_00217513 TCONS_00217514 s 5' 303567 TCONS_00217513 TCONS_00217514 s 5' 305454 EMBV3_36598 CGAGAGCTGGCGAAGGACTCTGAGTTAAGATCACAAAGTTGGGAAAGGTTTTTGCCACAG Gene GeneID:513714|KRR1:NM_001037819:5_cdna UTR3_Alt 2 NULL GeneID:513714 5 GENE KRR1 MGC128669 KRR1, small subunit (SSU) processome component, homolog (yeast) EMBV3_02876 GCATGCCACCTGCAGGCTGTGGAGCTGCGGAGACAAAATTCCAGATGGGTCTTCGCGAAT Gene GeneID:618665|LCN6:XM_002691717:99_cdna Constitutive 0 NULL GeneID:618665 11 GENE LCN6 NULL lipocalin 6 EMBV3_01396 AAATTTCAGATCAGCCTGACTTGCTGCGGCTTCTGAGGCAGTGATTCCAAGCTGCCAGTG Gene BVV0102_446877 + 0 NULL GK000008.2:35706508-36423539 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224975 TCONS_00224947 TCONS_00224964 TCONS_00224966 TCONS_00224963 TCONS_00224954 TCONS_00224946 TCONS_00224956 TCONS_00224950 TCONS_00224969 TCONS_00224955 TCONS_00224972 TCONS_00224961 TCONS_00224953 TCONS_00224968 TCONS_00224944 TCONS_00224971 TCONS_00224962 TCONS_00224970 TCONS_00224967 TCONS_00224951 TCONS_00224958 TCONS_00224960 TCONS_00224974 TCONS_00224973 TCONS_00224948 TCONS_00224965 TCONS_00224957 TCONS_00224952 TCONS_00224959 TCONS_00224949 1 XLOC_137662 Coding TCONS_00224946 XLOC_137662 Coding Coding PTPRD 8:36223410-36656174 j TSS168560 4209 1 TCONS_00224946_6 1300 21 0.990322647730975 0.000664618571242699 0.0010597970491411 0.00122429297396226 0.000511348547573353 0.000152526544980571 0.00012295360083478 0.000682682484825547 0.000219603986708843 0.00020216213597837 0.000487945875624034 6.02065540441596e-06 9.0335786099819e-65 0.000241173904037247 0.000317901352639856 0.000245188200655955 1.90198760686459e-07 0 0 0.000689536714420278 0.000998210488397034 0.00019663470052303 0 0 4.1818821794936e-302 0.000618991661611811 0.000857540202490632 0.000145242530288922 2.07371711892304e-30 1.41529226019069e-46 0.000171602287030484 XM_005199148.1 PTPRD PREDICTED: Bos taurus protein tyrosine phosphatase, receptor type, D (PTPRD), transcript variant X31, mRNA. 0.0 7034 99.39 0.933951057258256 XM_005251530.1 PTPRD PREDICTED: Homo sapiens protein tyrosine phosphatase, receptor type, D (PTPRD), transcript variant X2, mRNA. 0.0 5804 92.25 0.934188643383226 TCONS_00224946_6 sp|P23468|PTPRD_HUMAN PTPRD_HUMAN Receptor-type tyrosine-protein phosphatase delta; 0.0 2542 96.98 0.98 7 coding 0 1 1 1 0.075713090651328 0.561861195716844 0.0254400452614123 0.650778623148169 CACAACTGAGCGCATGTCTAGGCAGAGGGTTACATGGTGTCCTTCAGACAAGCTGGGGAGTACTGCGTTATCAACATCATAAAAGCAAGTAGCATGGAAGCAAACGAGTTATTCCACTAAGACTGATTCGATACTTCCCTTTCTCTCTGATTCCAAAGTGGATCCACCAAACATCCCTGAATGGAAGCTACAAAGGCTCTGAAAGTGTTCCAGCTGAAATTTCAGATCAGCCTGACTTGCTGCGGCTTCTGAGGCAGTGATTCCAAGCTGCCAGTGTGTGCTGGTGCCAAGCTGCAGGATGGTGCACATAGCCAGGCCATTGCTGCTGCTCCTTGCCTTCTTCCTCCACGCGGATGCTGAGACACCTCCAAGATTTACGCGAACTCCTGTTGACCAGACAGGGGTCTCTGGCGGAGTTGCCTCCTTCATTTGCCAAGCTACAGGAGACCCAAGACCTAAAATTGTCTGGAACAAAAAAGGAAAGAAAGTCAGCAATCAGAGATTTGAGGTAATAGAGTTTGACGATGGATCTGGATCAGTTCTCAGAATACAGCCCTTACGGACTCCACGTGATGAGGCCATTTATGAATGTGTGGCCTCGAATAACGTGGGAGAAATAAGTGTGTCCACCAGACTCACAGTTTTACGTGAGGATCAAATTCCCCGGGGCTTCCCTACTATTGATATGGGCCCACAGCTGAAGGTGGTTGAGCGTACACGCACCGCCACCATGCTTTGTGCAGCCAGTGGGAATCCAGATCCAGAAATCACGTGGTTCAAAGATTTCTTACCGGTCGACACAAGCAACAACAACGGGCGTATTAAGCAGTTACGATCAGGTGGTACACCAATAAGAGGAGCCCTTCAGATCGAACAGAGCGAAGAATCTGACCAAGGAAAATATGAGTGTGTTGCCACCAACAGCGCGGGCACTCGCTATTCTGCCCCTGCCAATTTATATGTCAGAGTTCGCCGTGTCCCACCAAGATTCTCTATCCCACCCACTAATCATGAGATCATGCCAGGTGGAAGTGTTAATATCACCTGTGTGGCTGTGGGGTCACCAATGCCTTATGTGAAGTGGATGTTGGGGGCAGAAGATCTGACACCTGAAGATGATATGCCAATAGGAAGAAATGTCCTAGAACTGAATGATGTAAGACAGTCAGCAAATTACACCTGTGTTGCTATGTCGACACTGGGTGTCATTGAAGCAATAGCACAGATCACTGTCAAAGCCTTACCCAAACCTCCAGGAACTCCTGTCGTGACTGAGAGCACTGCTACAAGCATCACACTGACGTGGGACTCCGGGAACCCTGAGCCGGTCTCTTACTACATCATTCAGCATAAACCTAAAAATTCTGAGGAACCTTACAAAGAAATTGATGGGGTGGCAACGACACGCTACAGTGTCGCCGGACTGAGTCCCTACTCGGATTACGAATTCAGGGTCGTTGCTGTCAATAACATCGGGCGGGGGCCTCCCAGCGAGCCTGTGCTGACGCAGACCTCAGAGCAAGCACCGTCCAGTGCCCCGCGGGATGTCCAGGCACGGATGTTGAGTTCAACCACCATCTTGGTCCAGTGGAAGGAGCCTGAAGAGCCAAATGGACAGATCCAAGGATACAGAGTTTATTATACAATGGATCCCACTCAGCATGTCAACAACTGGATGAAGCACAATGTAGCTGACAGCCAGATCACTACTATAGGCAACTTAGTGCCCCAGAAAACGTATTCCGTCAAAGTCCTGGCTTTCACCTCAATTGGAGATGGTCCTCTTTCAAGTGACATTCAAGTCATTACTCAGACAGGAGTCCCAGGGCAGCCACTAAATTTCAAGGCAGAACCTGAATCGGAAACAAGTATTTTGCTGTCTTGGACGCCTCCACGTTCAGACACCATCGCCAGCTATGAACTGGTCTACAAAGATGGGGAGCATGGAGAGGAGCAACGGATCACCATTGAGCCAGGGACATCTTACAGACTGCAAGGGCTGAGACCAAACAGCTTGTACTACTTCCGTCTGGCGGCACGCTCTCCCCAAGGCCTGGGTGCTTCCACAGCTGAAATATCAGCCAGAACCATGCAGTCAAAGCCGTCAGCTCCTCCTCAAGACATTAGTTGCACCAGTCCAAGTTCCACTAGTATTTTGGTAAGTTGGCAACCTCCACCAGTGGACAAACAGAACGGCATTATTACTGAATACTCCATCAAGTATACTGCAGTGGATGGAGAAGATGACAAACCTCATGAGATTTTGGGAATCCCTTCGGACACTACCAAATACCTTTTGGAACAGCTGGAAAAATGGACTGAATACCGGATCACTGTGACAGCCCACACCGATGTCGGCCCTGGCCCTGAGAGCTTGTCCGTGTTGATTCGAACCGATGAAGATGTTCCTAGTGGTCCTCCTCGCAAAGTCGAGGTAGAGGCTGTCAACTCAACATCTGTTAAAGTCTCATGGCGCTCACCTGTGCCCAATAAACAGCATGGCCAGATAAGAGGATACCAGGTGCATTATGTGAGGATGGAAAATGGTGAGCCCAGGGGCCAGCCCATGCTGAAGGATGTCATGCTGGCTGATGCACAGGACATGATTATCTCTGGGCTACAGCCTGAAACTTCCTACTCCCTCACTGTCACAGCTTACACCACTAAAGGAGACGGAGCTCGCAGCAAACCCAAGTTGGTGTCCACCACAGGGGCAGTTCCAGGGAGACCCCGGCTTGTGATTAACCACACTCAGATGAATACAGCCCTCATTCAGTGGCACCCTCCTGTGGACACATTTGGACCCCTCCAGGGCTACCGTCTAAAATTTGGCCGAAAGGATGTGGAACCGCTTACTACTCTTGAGTTCTCCGAAAAGGAAGATCACTTCACGGCGACAGACATCCACAAAGGAGCGTCGTATATCTTCAGGCTCTCGGCCAGAAACAAAGTGGGCTTTGGGGAGGAGATGGTGAAGGAGATTTCTGTTCCAGAAGAAGTTCCAACTGGATTCCCTCAAAACCTCCAGTCGGAAGGCACCACATCAACCTCCACCCAGTTATCTTGGCAGCCACCTGTCCTGGCCGAGAGAAATGGCATTATCACCAAGTACACCCTTCTGTATAGGGATATCAACATCCCTCTTCTTCCAGTGGAGCAGCTTATTGTTCCAGCTGACACCACTCTGACACTCAGTGGCTTAAAACCAGATACCACATATGATGTAAAAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCCAGTGTCCAGTTCAGGACACTGCCTGTGAATCAAGTGTTTGCAAAAAATTTTCATGTCAAAGCAGTAATGAAGACTTCGGTGCTGCTGTCTTGGGAGATTCCAGAGAATTATAATTCTGCCATGCCTTTCAAAATTCTTTATGATGATGGGAAAATGGTAGAAGAAGTGGATGGCCGCGCTACCCAGAAGCTGATTGTCAACCTGAAGCCTGAGAAGTCCTATTCCTTTGTGCTGACGAATCGCGGCAACAGCGCCGGGGGCCTGCAGCACAGGGTGACTGCGAAGACGGCGCCCGACGTTCTGCGCACCAAGCCTGCCTTCATCGGGAAGACGAACTTGGATGGCATGATTACCGTGCAACTGCCCGAAGTACCTGCAAATGAGAACATAAAAGGTTACTACATAATAATTGTGCCTTTGAAGAAATCTCGTGGGAAATTTATCAAGCCATGGGAGAGTCCAGATGAAATGGAATTAGATGAGTTGCTTAAAGAGATATCTAGGAAACGCAGAAGCCTCCGTCATGGAAGAGAAGTTGAATTAAAGCCATATATTGCCGCTCATTTTGATGTCCTTCCCACCGAGTTCACCCTGGGGGATGACAAACATTATGGTGGATTTACAAACAAGCAACTCCAAAGTGGTCAAGAATATGTCTTCTTCGTGTTAGCAGTGATGGAACACGCAGAGTCTAAGATGTATGCAACCAGCCCTTACTCTGATCCTGTTGTGTCAATGGATTTGGATCCACAGCCAATCACAGATGAAGAAGAAGGCTTGATTTGGGTTGTAGGTCCTGTGCTCGCAGTGGTCTTTATCATCTGCATTGTCATAGCTATTCTTCTTTATAAAAGTGCATGTGTACGTTTTCTAAATGACTCCATGTTGCCCTTCATCTATCTTCCCCTACAAAGAAAAAAGAATTCATAAAGTAATTG EMBV3_16476 AGGTCTGTAGTCAGACACTGCATCCTCTCTCATCCTGGGACGTCACTCCGCAGAGCTGCA Gene GeneID:507319|EFNA1:NM_001034292:108_cdna Constitutive 1 NULL GeneID:507319 3 GENE EFNA1 MGC128366 ephrin-A1 EMBV3_38543 GCTCAGCAGTTGGGCTCTGGAGAAGGTTTTGATTCCATTAGCCCTTTGGTGAAGAGTGAA Gene GeneID:539067|LOC539067:NM_001102224:161_cdna UTR3_Alt 2 NULL GeneID:539067 3 GENE LOC539067 MGC148531 chromosome 1 open reading frame 103 ortholog EMBV3_00946 GATGGAAGGTAAGAGGCGACAGGTGCGCTTTGGAAACTAACAGGACGGATTGGCAAAGCA Gene BVV0102_216098 + 0 NULL GK000008.2:10246575-10251631 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224372 TCONS_00224373 TCONS_00224371 1 XLOC_137520 Coding TCONS_00224373 XLOC_137520 NonCoding Coding ZNF395 8:10245404-10249763 j TSS168279 3846 4 TCONS_00224373_5 105 0.0748829953198128 3 0.118173474070675 2.95130696116911e-24 0.000619627226695161 0.000818488898159369 0.000306934724030863 0.00129195673315781 0.000406002848585575 7.16857788909151e-30 0.0011145529340473 0.00219545266879381 3.93057386859284e-05 6.4877966094046e-05 3.58453627810475e-05 3.40007772423319e-50 0.000213699078709118 2.04192918090237e-21 0.000364334717149344 0.000125578059925096 0.000202240003653969 0.000715606217878882 0.000681878778096433 2.24659592529738e-09 0.000381169696779078 9.80124898091918e-10 2.4209857117658e-05 0.00154325229311954 0.00150475652038164 0.00151945615322079 0.000218921892752597 2.41375353177653e-06 1.05351464792703e-18 XM_005209848.1 ZNF395 PREDICTED: Bos taurus zinc finger protein 395 (ZNF395), transcript 0.0 6387 100.00 0.920436817472699 NM_018660.2 ZNF395 Homo sapiens zinc finger protein 395 (ZNF395), mRNA. 2e-138 499 76.75 0.162246489859594 0 noncoding 1 1 1 1 0.339785222888942 0.245155345870257 -0.170222755469789 0.0991667403198344 GACCCTTAGGGTGTTGCAGTCTGAAACGCCTCCTGCAGGAAGGCATCACCGCACACTGTAAAACCCACGTACCCAAAGGTCCGGAGCCGGTCGCTAAGCTTCAGCGAGCCCCAGCAGCCGCCCCCTGCCATGAAGTCTCACCTGATCGTCACGTCTCCACCTCGGGCCCAGAGCACCACCAGGAAAGCCCGCGGGGAAGCTAAGAAGTGCCGCAAGGTGTACGGCATTGAGCACCGGGACCAGTGGTGCACCGCCTGCCGCTGGAAGAAGGCCTGCCAGCGCTTCCTGGACTGAACCATGGCCCCTCCCGGTGGCCTGGGGACACAGGCAGATGGGTCCCAAGCCCACAGCAGAAGCCTAAAAGCTACAGAGTGGACACGGGGAGTTTGGGCTCTATTGGCTAAGGTTGAATACTCAAAACAAATGTTTTAGTTTTTTTTTTTTAAATAGAAACAAAAAAATTATTTTTTTTTCCCCTAAAATGAGAGAGAGCCAAAACTGACCAAGGGTATTCTGCAGCAAACCAGAGACCAAAGAAATGACTCCCCCTCCTCTCCTCCCCACAGCCTATCTCCCTAGGGGATTAATGTGTACCGTATGGAAGGAAGGGACAGCTCATTGTGTTTCCTGCTGAGCTGGTGGATTCTTTGCTTTCTCCACTCTTTCAGAAGGGACTTTGAGCAACATGGATTTACTTTTTTTTTTTTTTTTTTTTAGAAAAAAGATTTCTGGCTGATGACCCAGAGAACAGGACCTGCTGAGGCTGGGGTGGGAAGACGGGGCTGATGTGTGAGCTTTTTGAGGTGCAGCCGGCCCCCTTTCTCCACCCAGATCTAGGAGAAGGGAGAGATTGTCCTCCCCCAGCAGCTTCCATCAGAATGCAAGGAAAGCTCTTTTTCTGGTGCCAGCTGCTCCGATGTGGGGTCCCTCAGGTCAGGTTGCAGCCCAACAGATACGGTGTGGCCTCTTCTCCAAGCCCAGATGCGTAGGTTTGTAAAAAGACTGTCCCCAGGAAGCTGAGCCAAAAGGCTAAAAAGAATTCACGTCGTACAGTGTGGCAGATCAAGACTCCCTTGCCCACTCTTTCCATGAGAAGAGACCAGACGGTATAAAACTCGGCAAGAGTTCTTCGCTGTTCCCTGAGTGAACCCACACCCACCCCTCCCCACCAGCTCTGGAAGACACCCCCTCAGAAACACTTTGTTTTCACTTACGGTGTATTCAGGAGCCTCTTTCTGATTAAAGATTCCCCCTTTGGCCGAGAGATCCTGCCCTGAGGTAGATCCCTCTTCGTCTCATGGGAACCAGGGATTTTCCCGTGTTCCTCCAAGGCCATAGGGCCGGGCTGGTGAAGAGAACAGAGAGAAAGGTAGGTGGCAGCTCCTGCCACGGTGAGAGGGCACAGAGCTGTCCCGTGGCTCCACAGGCTCACCTGGCCCTTTGGGGACCGTCTGGTTTTCTTCCTAAGGTGACAGGCAGGACAGGACTCTTCAGGGGGCTTCTGCAGGGTCCAATCAGTGTGATGGGGAGGGTCAGTTGGATGTGGTGTCGTGGTTCCAGACACCTGTTGGGCGTCTTTTCTGGGGAGGTTAGGGGGCCTGAGGAGGTCATGTGACGGGAACTGGGGTTGATTTAGCATCCACTGGAGACCTCAGGAATGGAGGGGACCCCGAACTGCGTGACCTGAGAGCTGAATACGTAAATCCATTTTTGTTGAGGAGGGATGAGTAGAGGCAGGGGGTTCTGTCCCTGGGCGAGCAGGGCTGGGGGAGGGTATGTTTTTGGCTCAAAGCCTCACCTTTCTGCCAAGCGGGACTGGTCTGGGGGACTCCTCAGGGCCCACGTCCCAAATGTCAGGGGCTCAGGGAACTCTACCATGAGGCCAACTCTCTGGGGCTTGCACAGCGGCATCCAGCCTTTGGCTGTGAGCAAGGCTGTCCTTCCCGTCCAGGCAGGCTCACCTGGCTGCAGGAACCCGATAGATGCCTTTCCATCTGTGACACGCATGTTGGAAACTGGCAGACGGGAATAGGGGGTATGATGGTGTGAAGGGTGATGGTGACCTGGGTTTGGTGACAGAAGGGAAAGGCACTCTTACACATGAGTGTCTTTGGTGGTGATGGGGTATATTTTTATAACTTAGTAAAAAAAAAAAAATGTATGTGGAATTCTGTCCCTCGGTAAAGCTGGAAATCAAGCCAGCAAGAGGTGCTGGGTTCTTCCTCCCGCTCCTTCAAGCTCCCAGCTTGCCAAAGCTGACTCCCGGCTTCGCGCCCTGTGCACCTGTAGGTCCTACCCGTGTGAGGAGGGGGCCTTTGAGACGGGGGTGGGGGGAGCTCTGCCCAGCAGCGTCTCCCCTTTCCTCCTTACTCAAAGCCTTTGCTGGGTCTCCCCTTTGGAGACACTATTTTCATTTCCTCCTCAGTTTGGACCATGTAGGTACAACTGGATATCAAGATTTTCTCTAAGTAAGGCAGGCTTGTCGCCTCACTGCTGCACAGGGCAGAAAAGGAAGAGAGAAGAAATTGATGCAACAATTTCAAAACTGAGGTTCTTGTTTTTTTTTAACATTCTGATGCAGCTTTCCCTGTCGGCCTTTGCTCCGGCCTCCTTCCTGGTGGTGGTGGCCTCCTCCAGCCTCTCTCCTCCCACTGCTCCGTCTGTGGCTGTCGTGCGGGTTCTTGACGTGTGGTCTGTCCTGGGGTTGTCCCATTCGTCTCTTCTCAGAGGGCAGGGGGTGGTTTGTAAACTGACCCCACCATCACGCCTGTTTTCTTCATCTCTGTATTTCTCCCTACTTCCTGGCCCATCCTGGGAGGCAGAACCTGATGGAAGGTAAGAGGCGACAGGTGCGCTTTGGAAACTAACAGGACGGATTGGCAAAGCAAGTGTCTTGGGAAACTCTTTACTCTGGGGATGTTATGCTTATTCCCAATATTTTGGAAGTACCTTTGGAGTCTGTGGTGCCTGCTTTGAGCAGCCTTAATGATACTGAATCTGCACCCATGCTTGCGCTTCAGTGCGAAGAGAGTCCAGTGAATAGTGGTGGTGTAGTGGTGGAGTCACTGAGTCCTGTCTGACTCTTTGCAACCTCATGGTAGCCCTACAGGCTCTTCTTGTTCGTGGGATTTCCCGGGCAAGAAGACTGGAGTGACTTGCCATTTCCTGGTGGTCAAGTGAGGTCACAGGTGCAGAACACAAGGACCAACGGGTGAGTAAAATGGCTTAGATTTAATAATCTGACTTCGAAGCTGGCTGTGAAAGCAATCCTGTAATTTCAGAACACATTCTGAGCAACATCCACAAGGTTGCAGTTGGCCCGAGGCTAGATTCTTTGAAGGACATAATGGATTTGGATGTGGAAACTCTGACTTTTCGGAAGAAATCTGTCCTGTTACTTTCTGGTCCTCACAGGTTCTGACTTTACCAGGGGCAAAAAGAAAAAAAGGAGAGGGAGATAAATCCCATCTGTGAACTTGTCTTTATTGGCGCCTTTTCCCCCAGCTGTCTTCCAAGTATTATTTTTACTGTTAAAAATTTTTTTAAAAATGTGAAATATAATGTTTTTACAGCAATATGAAATATATTTTATAAGGAATAAAATGGTACATTGTCTGATTTGATGTGTGCCTGTCCCTCCGCCCTCTCACCCTGCAAAGGATAAGATTATCTTTGTCCTTGGTGTTAAGCAAGCAGTAGCCCCGGGGGAGAAGTGTGCACACTCCTTTGCTTATAGTAACAGCAGGCAACATTATCAGGGACCTGGCCAAGCGCTTACATGGATAAACCCACAAAGGAATTACTGTTGTCAGTCCCATTTTTATTTTATTTTTAAAATAAAATATT EMBV3_32196 AATTTTCCCGCTTTGTGGATCTGGAGAGTGAGGAGCCTGTGTCTGGAGCGTGCAAAGAGG Gene GeneID:513236|LOC513236:XM_002699341:210_cdna Constitutive 0 NULL GeneID:513236 29 GENE LOC513236 NULL similar to tigger transposable element derived 3 EMBV3_34987 CTCTTACAGTTCAACCCTGTGGAGCGGCTTGGTGCTGGAGTTGCTGGTGTTGAAGATATC Gene GeneID:533192|RPS6KC1:XM_002694259:244_cdna Constitutive 0 NULL GeneID:533192 16 GENE RPS6KC1 NULL ribosomal protein S6 kinase, 52kDa, polypeptide 1 EMBV3_40636 CTATTCCTAAATGGCTTCAAAGAGGAGTCATGGATCCACTGGACAAGGTTCTGTCAGTTC Gene GeneID:100297914|LOC100297914:XM_002694408:104_cdna Constitutive 0 NULL GeneID:100297914 17 GENE LOC100297914 NULL hypothetical protein LOC100297914 EMBV3_22440 GTGAATTAACCAGGCAGCCCCTCTTGCCCCCAGGGAATCCACACTGTTCTCTCTGCGCTA Gene GeneID:282035|RGS16:NM_174450:14_cdna Constitutive 0 NULL GeneID:282035 16 GENE RGS16 NULL regulator of G-protein signaling 16 EMBV3_42091 AGAAGTGTTGTCTGGAGAGTGAAGGGCTCTATACACCATGCTGAGGAGTTGGGGCTTTCA Gene BVV0101_063840 + 0 NULL GK000026.2:39356980-39507503 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152340 TCONS_00152338 TCONS_00152339 TCONS_00152337 TCONS_00152336 1 XLOC_092314 NonCoding TCONS_00152339 XLOC_092314 NonCoding NonCoding - 26:39385270-39390651 - TSS113641 1778 2 TCONS_00152339_5 88 0.0208098987626547 2 0.669888475836431 0.000275480486363939 5.80624658615995e-05 0.000226238786710979 9.80668486681456e-05 1.09514427678234e-05 0 4.60711239549951e-05 0.00010830343432896 1.60971191079573e-08 1.19575734748104e-08 0 0 8.05985154690612e-09 1.36084209907235e-08 0 0 0 0 0.000325920298625944 0.000266357988887602 8.71074833917373e-05 0 1.6269461268402e-51 0 0.000214035068975839 0.000558369119349812 8.12019907307139e-05 0 1.51019338314333e-08 0 0 noncoding 0 1 1 1 0.0625145850779156 0.586868883635377 0.0441042389789522 0.448917448738923 AGGGACCACTCTCCACCTTGTTTCCTAGTTATTTCTTCTTCCTTCTACTAGACTGTCAACTCTCTGAAGACAAGGGCCATTTGCAAACAGCAGAGAGACCTGAGGGAGTTTACTGGTCGTCTTTTGATAGAAAATGAACAGAATTGCTTGAATCATTATTGATACCATGCAAAAGACTTGATCCATTTTCTTCAGGGACTTGCATCTCTGAACTCTTGTAGTCTTTTGGGTATGAGCAACCCTTCATAGAACAATTTACTTCCATTTTTTCTTCCATCCAGCAGCTGATGGGAAAAACTTTGCTGACACCAACAGGGCTTGTGGATGGCAGAAGATTATTAAATATCAGATCTCACTTAGGATTGAGTCATGCCTTCTCTAAAGGATTGCTTTCAGGAGCTGGTAGACTCCAGCAGTTTCTCTGATGGGGGCTCTGTGTGTTTTCTTTAGTAGGTTCCTTCTCAGCTGTGCTGAGAAGCCGGGGTTAAGCTTTGGTTTGAACCAAATGAGAGAAAAGGTCGGGTGTGGGGAAAAGAAATAGAATCCACCGTGGCAGTCAATGTGACAGGCATCCGGGTGTCGGCACAAACAGTGGGATGTGATGGGCACGTCTTCTTAATGAAGGAATAGTTTTGGGATCTACTTAGGAAAGCTGTGAGACCCGGCTCAGTGTGCCACACAACCGAGCCTCATTAGCCCAGATGCCTCCCCACAGACGAGAGAGCTGAGTATTTCCCTAATGTTGGAAACCTGGTAATTGCCTTTTGCAGGAAAAGCAATGACTGTTTCTGCACACTCCCCCAATTTCCTGAAAACTTTGATTGTTTTTAGGACATTCTGGGATGAGTAAAAACCCAAGGCAGCTCCTTCTAAGCTATATTTTATACCACGGGCCCTGAGGTCATGTGTTTCTTCTTCTCCCTCAGTAGAACACCGCTCATTTTGGCTTAATGCCTTTGCTTTAGACATTGTCCATCTCATCCCCACTTCCTCCCTTCTGAGAGTCAGGAAAAAAGGATATCTCTTCAGGAAATGGAGCTCTGGCTCTCGGGGTGAGGAAACAAATTTACGATGCACAGATCAATTTCACATGGTTTTCAGACGAGGATTGCTTTGAAAAGTGAATCTCTCATTAAACTCCACCAGGAGGATTGTGTTCCATATTGCCTTTCTCAGCAGCCTTCTAGATCTCGCTGGGCCCAGGAACAGCCTCTCTCAGGCCTCATCTTCCTCTTTTCTAAAACAAGCAGGAACTCAGCGTCCTACACAGCTGGGCTAGTCAAGTGCGGTTCTGGGACCAGCAGTATCTGCAACACTTGTTTGGTCTCTTAGGACCCATCCGAGAAAGCCCCAACTCCTCAGCATGGTGTATAGAGCCCTTCACTCTCCAGACAACACTTCTGGCCCCCACTTCTGATGCCAGCTTCCTCAGACACACACAGCTCCCACATCAGCAACTTGGCCTCATCAAGACCTCCACTCCATGCTCCCAGAGCCCAGCATATCTTCCTGAAGCCATGCCTTCCATGGCTTTACACTTGTCCATGGAGTCAGCTCAAGAGCCTTCCACCCCTGTGCTTTTTTTTGAACTTTTTCCCACCTCATTCAGCTCTTCCTCATATAGAATTGCTGCTTCTATGTAGTCTGAATAATCTGAATGAAGATTTATTGGGATGGAGATGAATCTCATTGTGCAAAGGCCATCTGTTACCTGTCTCCTCCCCTATGTTGTGAATACCTTGAAGGAAAGCAGTATGTGTGCATTCAGTCGTGTCCAG TCONS_00152333 s 5' 28076 TCONS_00152333 s 5' 28535 EMBV3_41064 CCGACACACACATTGGGTTCGCTGTGCCAAGTCTTATTATGGAGGACTAACTTTGATGAA Variant GeneID:525136|WDR51B:NM_001099031:38_cdna 487^913 4 EMBV3_02674 GeneID:525136 5 GENE WDR51B MGC139093 WD repeat domain 51B EMBV3_14345 AATGAAACGCCCTACTTCCTCTGGACAATCAAACGGGACGTCATCGACTATCACAGCCTG Gene GeneID:100336501|LOC100336501:XM_002687997:126_cdna Constitutive 0 NULL GeneID:100336501 5 GENE LOC100336501 NULL RGD1306462 protein-like EMBV3_23252 AGCCAAAGCCAAGCAGGCCCATCTTACCACCCTGAAACATATACAAGCACCCTGGTGGAA Gene GeneID:534598|IQCB1:NM_001046381:77_cdna Constitutive 1 NULL GeneID:534598 1 GENE IQCB1 MGC137218 IQ motif containing B1 EMBV3_08584 ACGTGTTCCTCATGATCCGGCGCCACAAGACCACCATTTTCACGGACGCCAAGGAGTTGA Gene GeneID:530932|TCEB2:XM_002695449:100_cdna Constitutive 0 NULL GeneID:530932 18 GENE TCEB2 NULL transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) EMBV3_43482 CCTGTGGCCTCATGACCCCAACGCTGGAGGAGTACATCCACCTCTACAGCTGCCTCAACA Gene GeneID:100300760|LOC100300760:XM_002694284:329_cdna Constitutive 0 NULL GeneID:100300760 16 GENE LOC100300760 NULL similar to protein tyrosine phosphatase, receptor type, V EMBV3_13035 TAGCAGGAGTCTATCAGGGCAACATGTGTGTTTTACAGAACTGTTAGCTGGCTGTACATG Gene GeneID:510267|TMPO:NM_001098005:977_cdna UTR3_Alt 3 NULL GeneID:510267 5 GENE TMPO LAP2beta thymopoietin EMBV3_38412 TGTTCACTGCTATGTGATCTAAACCCAGATGACCCCCTAGTACCAGAGATTGCACGGATG Gene GeneID:100337264|LOC100337264:XM_002692375:268_cdna Constitutive 0 NULL GeneID:100337264 13 GENE LOC100337264 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_16766 GAGGCAGAGGTCACGGAGCTCAGAGAACAGGCTGCAGCCACAATGGTCAGGCCTATGGCA Variant GeneID:515624|KCP:XM_002686948:94_cdna 247^436 1 EMBV3_29514 GeneID:515624 4 GENE KCP CRIM2 kielin/chordin-like protein EMBV3_12709 CAGACTCGTATCAACAAGCCCGAGTCCCTGAATCTCTCCAGGCCTCACTTCCTCCTCAAA Gene BVV0102_135048 + 0 NULL GK000029.2:28537748-28587899 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29323 AGCAGACGGCAAAGAACCCCATCAAGTCAGACATCCCAGAGCTTCAGAACTGTCCAGGAA Gene GeneID:100335985|LOC100335985:XM_002696247:43_cdna Constitutive 0 NULL GeneID:100335985 20 GENE LOC100335985 NULL hypothetical protein LOC100335985 EMBV3_00490 AATAAACAGAAAACGCTGGTAACTGGTCTGTGTGTCTGTGGATGGAGAGCAGGTCTGCGC Gene BVV0102_056053 + 0 NULL GK000011.2:106015054-106125017 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26863 CTCCCACTTGGCAGTCGTCAACCTCTTCTATGGGCCCCTTGTCTACACTTACATGTTACC Gene GeneID:100299275|LOC100299275:XM_002689134:126_cdna Constitutive 0 NULL GeneID:100299275 7 GENE LOC100299275 NULL similar to olfactory receptor, family 2, subfamily B, member 2 EMBV3_05712 ACTTGTGAGGTCTGCCCCCAACCGGAAGGTCACTGAATTGACTCCAGGCCCCATTTTCAT Gene GeneID:615408|SEPT5:NM_001076371:103_cdna Constitutive 0 NULL GeneID:615408 17 GENE SEPT5 NULL septin 5 EMBV3_20066 ACTGGTTGTTCTCCCACGTCGGCGACCCCTTCCCGGGATATCCGATTTGCTAACCACGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22224 GTAAGCAGATGCTTTACCATCTGAGCCACCAGGGAAGTCCTAACTATTAACTAAAGGAAG Gene GeneID:512219|MGC138914:NM_001083673:3_cdna Constitutive 0 NULL GeneID:512219 18 GENE MGC138914 NULL hypothetical LOC512219 EMBV3_06831 GAGAACATCACCGTGGTGAAGGGCATCCGGTTTCTGATGAAGAATTGAAAAGAAGAGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17000 TCATTTCTGTGTCTACATTTCATGAGTCAGTTTCGCATAGCAGCTGTTGTGGAGGACGGG Gene BVV0102_086390 + 0 NULL GK000017.2:40671718-40790742 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080193 1 XLOC_049077 NonCoding TCONS_00080193 XLOC_049077 NonCoding NonCoding - 17:40718465-40719873 - TSS60133 1408 2 TCONS_00080193_3 95 0.260653409090909 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000534609444907598 0 0 0 0 0 0 0 0 0 0 0 2.98904139550501e-05 0 noncoding 0 0 0 0 -0.0351894693950449 0.766523672467397 -0.012545192475192 0.858028392026339 CTTTTTATTTATTAACATTAGCAACAAACTCGCTTGGTTTACCCTTTTATTGCCAAATGAGTTTCATGCTATTTTTCTCTTTTCTTTTTTTTTGTATACACCATGAAGTATTCTGGTAAATCAACCCGTCCTCCACAACAGCTGCTATGCGAAACTGACTCATGAAATGTAGACACAGAAATGAAGTATTTGATCATCTGGGTCCATCCATTTGCCAATGCACCAACAGGATTTTTCCATGCTACAATCTATTTTCAAATATTGCAAATAAATTGCTGGTGAGTGTTGTTAGAAATCATTCACTACATATGAGAAAAATGTCCCTCATTTTGTAAAAGCTATAAATCCATTAACTTCTGATTATAATAAAAAGGAAAGAACAAAAGATGTTATCCTAAATTTCAATGTCCTGAAGGGCATGAAGGCCATCTCTTTTTGCCTTTCAAAAAGAAAATTATTCAAATTAAGTCATATATTTCAATTGTTCTAGACAACATTTTTTGCTATAAAGAATACAATTGCTAGTCCTATAATCGTAGATGGAGATACAATGTAGAAAAATGTTTGGTGTACATATTCAAACGTTTATAGGAAATTCCTTCTGTCTTCCATTCTGCCCACAATGTCCCCAAACAACAGTGGTACAGGCACTTCTGTCATATTGTTATGTTATTAATATGTTACATTGTTATTTTATGTTAGCATTTCTCCTATGTGGCTATGGGCTTTCAGAATCCCACTGTTTGTTGAGCTTGCTTCACCTAGAAGGAAGCATTATTGACATACGGGTAAAACTGGTTAAAATTACCTTCAGTACTAGCCTGTAAACCTATGGAAAAAAGTTCAACTTCATAAAATTAATGAAATGTTATCTGAACCCTGAAATACAATTTTTCACTTCTCAGACCGGCAAAATTGGAAACATTTAATGGAAATCCTTTGCTGGCATGGATTTTTATACACTGTAGTGGAAATACAAATTGGTGCAACTTTTTCAAGGAGCCATTTGGCAATATCTATCAAAATGTTAACTAACATATACTTGGACTCAGTAAAGCACTACCAGGAATCCAATCTAATATATCTTCTCAAAAAAGCATCCACACACACATACACACACAGATACAATGATGCTCACCACAGCCTTATTTATAAGGGGATGTGGGAACTGGCAACACCATGAATGTCCATCCTGGTGGGACTACGGATATAACTAAGGATGCACTGGACACCAGCATGTCCCCTAAGCAGGATGAGGCTGGCCTCAGGGTCATGCACAGAAATCACTTAATTTTTTTAATCAAAATGTGCTGTGGGATCATATAACTTTTTTCTAAGTACATAAAAAATTATTAGAGACTTTGGGATGGTGATACCTAGGAAGGAGACCTAATTTTACCTACATTGT TCONS_00077050 TCONS_00077051 . 5' 47909 TCONS_00077050 TCONS_00077051 . 5' 47909 EMBV3_42988 TAGAATCCGAGCAAGATAACCTTCCCAGCCACTTACCAAAGGCCTCATTTTGGGGAGACC Gene GeneID:100336793|LOC100336793:XM_002689973:15_cdna Constitutive 0 NULL GeneID:100336793 9 GENE LOC100336793 NULL chromosome 9 open reading frame 79-like EMBV3_03457 CCGTCTGCAAATGAAGGCGACGAGCGAACTGTCTCATAGTCGTGGAATGCATCACCATTA Gene GeneID:528382|RORB:XM_002689651:41_cdna Constitutive 0 NULL GeneID:528382 8 GENE RORB NULL RAR-related orphan receptor B EMBV3_07143 AGGCCATCGTGAACGAGCTCCTGCATCTGGGCATAGCGGAGCTGCCAGAGAAGGTGTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43687 TGGTGACTGTTCGTGAAGCCGCGTTACAGGGTACTGTGCATGCCTGCTGAGGAGTTCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40103 AGGAATTATTTTGAAAACACTGATATTCTTGACGGCATGAACTGGGTCTGCAAAAATGTC Variant GeneID:540040|ARL3:NM_001038567:210_cdna 296^532 1 EMBV3_41084 GeneID:540040 26 GENE ARL3 MGC133651 ADP-ribosylation factor-like 3 EMBV3_22480 TGATTCAGAAGATGCAGGGAGCGCGGAGTGCTCTGATACAGACTCTGAGGAGCAGGGGGA Gene GeneID:516289|RIOK1:XM_002697599:72_cdna Constitutive 0 NULL GeneID:516289 23 GENE RIOK1 NULL RIO kinase 1 (yeast) EMBV3_36059 ATGCCGCCCTGTGGGGGTCGAGAATTCAGGCTCCTCAGATCACTACAGGCATTCAGCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09421 CTCTTCATTGTCTGAGGGCATCTTGGCCTTTGCCTCCTTCCTCAGGGAAATCACCGGTCA Gene GeneID:534311|TOR2A:NM_001083476:160_cdna Constitutive 2 NULL GeneID:534311 11 GENE TOR2A MGC140387 Torsin-2A torsin family 2, member A EMBV3_37271 TGTGTTTACAGCCGCTGACGTGTCTGAGAAGCATGTGGTCACTTTTGTGTCCCTCCCTAA Gene GeneID:282148|ATP6V0D1:NM_174505:45_cdna Constitutive 0 NULL GeneID:282148 18 GENE ATP6V0D1 ATP6D ATP6DV ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 EMBV3_28065 GCCTTTCTTCTGCCTCCTGGGCTGGGAGAGCTGGAGAGAAAGGCCAAGCAGACATCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13385 CTACAGTATTTGTACCTTCAGAAATGTCAAATCCCCCAGGAGGAACTGAGGTATAGCCAC Gene GeneID:509032|ANKMY2:NM_001075384:20_cdna UTR3_Alt 2 NULL GeneID:509032 4 GENE ANKMY2 MGC140747 ankyrin repeat and MYND domain containing 2 EMBV3_33555 AGCAAAGAGGGCTCTATCTGGAACCACCTGGGCCTGTGTTTGGAAGCAAAGACAACTTCC Variant GeneID:790870|LMAN2:NM_001101309:52_cdna 331^448 2 EMBV3_18206 GeneID:790870 7 GENE LMAN2 NULL lectin, mannose-binding 2 EMBV3_04310 ATTCGCCAGCAAATCCCCATTTTTAGCCAGAAGCGATCAGACCTCTATGCAGTGGAAGCC Gene GeneID:520620|NIT2:NM_001038133:75_cdna Constitutive 3 NULL GeneID:520620 1 GENE NIT2 MGC134308 nitrilase family, member 2 EMBV3_32505 GCACATGACGTGGACGAAAGACAAGTATATGGCGTCTCGGGGACAAAAGGCCAAGTCAAT Gene GeneID:521217|SLC12A6:XM_002690775:556_cdna Constitutive 0 NULL GeneID:521217 10 GENE SLC12A6 NULL solute carrier family 12 (potassium/chloride transporters), member 6 EMBV3_34621 GTACAGACAACGGTACATTCAACCTTTCACGGGGCCAAACACCTCTAACAGAAGGCTCTG Gene GeneID:789163|LOC789163:XM_002695994:377_cdna UTR3_Alt 2 NULL GeneID:789163 19 GENE LOC789163 NULL hypothetical LOC789163 EMBV3_31272 AGTTAGGGTGCGTGGGCTAGATGTTCTGCAGCATGTGGGATTTTAGTTTGCTAAACAGCC Gene BVT0101_065615 + 0 NULL GK000023.2:8737238-8774673 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135868 1 XLOC_082091 NonCoding TCONS_00135868 XLOC_082091 NonCoding NonCoding - 23:8748110-8751018 - TSS101158 2908 2 TCONS_00135868_1 63 0.955295735900963 1 0 0 0 0 0 0 0 0 0 5.15518042245331e-05 2.82977537319214e-06 1.18080455772838e-05 2.64364675749272e-05 3.9467595880843e-06 7.92626727798517e-05 5.73627344199616e-05 0.000354213036053501 0.000616589912788314 0.000198449205205592 0 9.89192892666885e-06 0 0.000181604060632412 7.25594800938748e-05 0.000343018854201829 0 0 0 1.65151030026341e-05 4.00655433539391e-05 6.20245978648312e-05 XM_005225438.1 PDE6C PREDICTED: Bos taurus phosphodiesterase 6C, cGMP-specific, cone, alpha prime (PDE6C), transcript variant X1, mRNA. 3e-26 125 72.47 0.077716643741403 NM_016557.3 ACKR4 Homo sapiens atypical chemokine receptor 4 (ACKR4), transcript 1e-23 116 71.48 0.0849381017881706 0 noncoding 0 0 0 0 -0.0367688235938879 0.775273852665883 0.0423187325510467 0.468374966883914 CTCGCTAATCATGAATTAATTTTTTAAAAATATTTTAATTTATTTGTTTATTTGGCTGCATGAGGTCTTAGCTGCAGCATGTGGGATCTTTCATGTGGTGCACATACTCAAGCGCACAGGCTTGGTAGTTGTGCTGCACAGGCTCCAGACCACATAGGCTTAGGCATGTGGGATGTTAGTTCCCTGACCAGGGATCGACCCTGTGTTCTTTCCATTGCAAGACAGAGTCTTAGCCACTGGACCACCACCAGGGAAGACCCCCAATCATGAATTTAGAGATGTGGCTATCCTGCCAGGCAGGTGAGGAAAGCTACTGTCTCTGAAATACAGTGATTACCTAGGTGGTTTTAAAATGTATGGGTTGTAGAATATGGCTCAGCAATAAAAATGAAGGAACTTTGATAGAACAGTTTGGATGTATCTCAAGGACAGTATGCTGAGTGAAAAAAGCCAGTCTCAAAGGGGCATCTGCTGCATGATTCCATCTGTATAAATAACAAAAATTATTGAAATGAAGAACAAATCGGTAGTTGCAAAGGGTTAGGGACGGTGTTGGGAGTGGAGATGGGGCAGCTGGGAATGACTGTAAAGGGTATCACGAGGGAGAGCTTTGTGGTGAAATAATCCTGTATCTTTATTGTGGTAGTGGTTACACAGGCTGCACATCATGAGTGACAGAGTTATACACATGCATCCCCAGGATCAGTTTCCTGGGGTTTATATCGAACTGTAGTTGTGTAAGATATAACCATTGTAGGAAAGTGGGTGAAGGGTACATGGGGCTTCTCTGTATTAATGACTTCCTGTAAATCTATAATTATTTCAAAATAAAGAGTTAAAAAAAATATATGGACTTCTGCTTCCAGAAATATAGAATAGGTGTATATTTCTCTATTCCCAGTGAGTACAACTAAAACCCTGCACATTATATACATAAAAAGCAAGCATAAGAGGGACTTCCCTGGTGGTCCAGTGGTTAAGAATCTGCCTTCCAATGTAGGGGATGTGGGTTCGATGGCTGTTTAGCAAACTAAAATCCCACATGCTGCAGAACATCTAGCCCACGCACCCTAACTAGTGAGCCGTTGTGCTACAGCTACTCAGCCTGCATACTCTAGAGCCTGTACTCAGAACTGGAGAAGCCCCCACACACCATAGCTAGGAAAAGCCTGTTTGCTGCAGTGAAGAGCCCGTGTGCTACAACAAAGACCCAGTGCAGCCAAAAAATTAAAACAACAACAACAGACAAGCATAGGAAACTCTGAAAGGCGGAGAGAAGAAGGCTGACCTGCTAGGGCATTGTGACCCAAAGAACAACATAATGAGCTCTCCGGATTTTCTGTTTGCCTCAAAGGTGCCAGACTTGGAGCTGAAGAAGTTGGAACCAGGAATCTCCAATGGGCAACAGACAAAAATACACTCCATGAAAAGTCTGCTTCCTGTATCCGAACAAACAGAAAAGAGGTAGCTTAGTAAGTCAGAAAACTTTTAGACAATAACCACTCTATTCCAGCCAAACACCACAGAAACTCACCCTACCCCAATCCATGCCACAAAGACCAAGTGGGGAGTTAGATTTCCACCCTTGTGAGGTTACAATGAAGTGCCCCAAACCCCTGCCAGGATGGTGAGAAAAGAGCTTGGATTATCATTCCCATCTGGCAGTAACAGGGCATTGCCCCCTCTTGAGATGTCAGAAGACGCTGAGTCAGAACTTTTAAGGACTTTTATCAATGTCCAGTGGTGATGAGGCTGTGGGGAGCAATAACAAGGCACTCTGCCACTTCCCAGCTAGAGAAGTATTAGCTGAAGCTTGCTGAAGAGCCAGAACTTTCACATTAGCCCAGCAGTAATGAGGAACTCTTTCCTTGGGTATCCAAGGAGGCTAATTGGGCAACCTGGACTTCTGTTTCTACCTGATAGTAACAAGAAAGTACCTCCCCATTTCTGCATTGCAAGGATAAGTTAGCAGAACAGAGCATTTAAATAAGATCCAGAATCTCGGAACATAATATGAAACTATCCAGATTTCTATCTAAGATCACTCATTGGACCAAGATCAAGGAAGATCTCAAACTACATTTCAAATGCAATTGATACCTGTCAACAGTAAGCTGATAGTGCTCCTGGAGTAATTAGACAAAAGATTTTAGAGCAGGCATCATGAAAAGGCTCTAGTGAGCAAAAAGATATAAAGAACCAAATGGAAATTCTGGAACCGCCAAATAAGTTAAAAAAATTCATGAATAGTCTCAACAAGAAACAGTAATCAGAAATAATCAGAACTTGAAGATAGAACAATAAAAAATACCCAATCTGAACAACAGGAAATAGACTTAAAAAAATGAACTGAATTTTAAGGACCTGTGGGTCCCTGAAAATCTAATATTCATGTTATCAGACTTCCAGGAGGGGAAAAAAGGAGAGAGCCAAAAAAGGTACTGCAACAAATAATGGTTGAAAACTTCCCAAGGGCTTGTAAGAGACATAAACACAAATTTTCAAGAAGCTGAATAACAATCAGGATAACTCAAAGAAATCTACATAGTTATGAAAACTGAAAACAAAAAGTTTGAAAACAGCCAGAGAAAATGACACCCTACTTTTGAGGGGAAACAATTTGAAGGACAGCAGATTTATCATCAAAAACCATGGATGCCAGAAGGAAGTGGCAAACAGATTTCAAGTGCTGAAAGAAAAGAATTATCAGTCCAGAATTCTATACCCTGTGAAAATAATGTTTCAGGGGCAAATGGGAAATAAAGATGTTCTCCAGTGAGAGAAAATGAAGAGAATTTGTTGCCAGCAGATATACTGTAAAAGAATGACTAGAAGTTCTCCAAACAGAAAAACAATAAATGAATGAATAAATGAGTGAATCTCATCAGGATTGATGAGAATATGGTAA TCONS_00132192 . 5' 5156 TCONS_00132192 . 5' 5156 EMBV3_36672 TCTATTGACAGAGGATCCAGCAGTATTTCCAGATTCTGATTTCAGATCCCTAGATGATGG Gene GeneID:540218|ZBTB6:NM_001076207:44_cdna Constitutive 0 NULL GeneID:540218 11 GENE ZBTB6 ZNF482 zinc finger and BTB domain containing 6 EMBV3_01283 CACCCCTCTCGCTGCTCAGTCCCGCCTCAGTGTCGAGCCAGAAGAGAAGTAAAACTCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33642 ATGGTGAACATGCCAGGAGAGCAATGCAAAAGGCTGGAAGACTTGGAAGCACAGTATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20533 GCAACACAGCCAACTATTTTTGGTGCCAACACATGAGGAGAGAGGGAATATGGAGGTGCC Gene BVT0102_140151 + 0 NULL GK000018.2:45853126-45886298 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086303 1 XLOC_052114 Coding TCONS_00086303 XLOC_052114 Coding Coding ZNF792 18:45884734-45900972 = TSS64248 3839 1 TCONS_00086303_3 579 0.194321437874446 4 0.763811048839071 0.00118169570591569 0.0018085801886686 0.00187944562663009 0.00139277509356585 0.00103507000236712 0.000786941926228284 0.00139774693974841 0.00148148838859361 0.00252166383736815 0.00178729146383295 0.000204656554450945 0.000343654919398633 0.000333464269200078 0.000494456884862312 0.00131090391301704 0.00562290379855882 0.00207863396178101 0.00454163511311125 0.00215275052007634 0.00176003514062106 0.000679913450022057 0.00456365085224088 0.00236943166812804 0.00346239109744774 0.00122242463455223 0.0017779428528304 0.000482252404565048 0.000963512079004109 0.000368953007797395 0.00305699282217506 XM_005195512.1 ZNF17 PREDICTED: Bos taurus zinc finger protein 17 (ZNF17), transcript 3e-115 421 67.10 0.373274290179734 NM_175872.4 ZNF792 Homo sapiens zinc finger protein 792 (ZNF792), mRNA. 0.0 1290 78.36 0.40505339932274 TCONS_00086303_3 sp|Q3KQV3|ZN792_HUMAN ZN792_HUMAN Zinc finger protein 792; 0.0 754 62.34 0.989637305699482 7 coding 0 0 0 0 0.019562213539444 0.878403970451285 -0.0195565979393571 0.769683175442866 ATGGCGGCGGCTGCGGCGCTGATGGACACAGCGCAGGGCTGTGTGACCTTTGAGGACGTGACCATTTACTTCTCCCCGGAGGAGTGGGGACTCCTTGATGAGGCTCAGAGACTCCTGTACTGTGATGTGATGCTGGAGAACTTTGCACTGATCGCCTCCCTTGGACTTGCATCTTTCAGGTCTCACATAGTTGCCCAGCTGGAGATGGGGGCAGAGCCCTGGGTGCCTGACCAAGCGGACATGACTTCAGCCATGGCAAGAGGGGTGTATAGAGGGCTTGGCTCAGATTTTTACTGTGGAACAGAGAGTGAGGAATCACCTGCTGAGCTCAGTGTTTCTGTAGAAGTGTCACAGAACATGAACTCCAAGGCAGTTTCATCCACCCAGAAGGGCTACCCCTGTAACCTGTGTGGCCTCCACTTGAAAGACATTCTATATCTGGCTAAACATCGGGCAACACATTCCAAGCAGAAACCACATGTGCATGAGGCACATAGGAAAGAATTGAAGTTCAACGCCCACTTTCACCAGCCACAGATGCAGCAGAATGTGGACAAGTCTATTGGAAGGAATGAAGGCAGGGCCTTGCTTGTGAAAAGCTTCAGATATGACACATCAAAGAAATCTTTCACATTCAGGGAGAATGGGAAGGCCTCTGTGGCCAGATGTGGTTTTCTCCAGCATCAGGTCACTACCAGTGTGGGGGAGCCAGAACAGAGCTCTGAAAGTGTGGTGGATTTTCCCACTGTGCAACTCCATAAGAAGTGCAGTGAATTTGAGAATGCTGTCAGTGACAAACTTTCGCTTGTTCAGCAGAGAACCCACACTGGAGAAAGGTCTTATGAGTGCAACAAATGTGGGATATTCTTCAGCTGTGCTGCTGGCCTCTTTCAACACCAGAGAGATCATAATCGAGGAAAGCCTTATGAGTGTGGCGAATGTGGGAAATTCTTCAGCCAGCACTCCAGTCTCATTAAACATCAGAGAGTTCACACTGGTGAAAGCCCTCACGTGTGCAGCGAGTGTGGCAAATTCTTTAGTCGAAGTTCTAATCTTATTCAACATAAGAGGGTTCACACTGGAGAAAAGCCTTATGAATGCAGTGAGTGTGGGAAGTTCTTCAGGCAACGCTCGAACCTTATTCATCATAAGAGGATTCATACTGGTAAAAGTGCTCATGAGTGCAGTGAGTGTGGAAAATCCTTCAACTGCAACTCCAGCCTAATTAAACACTGGAGAGTTCATACTGGAGAAAAACCTTACAAGTGCAATGAATGTGGGAAATTCTTTAGCCGCTTTGATGGACTTGTTCAACATCAGATAGTTCATACAGGTGAACGACCGTACAGATGCAGCGTATGTGGGAAAGCCTTCCGCCGGAGCTCTGACCTCATGAATCATCAGCGAGTCCACACTGGTGAAAGACCTTATGAGTGCAGTGAATGTGGGAAAACCTTCAGACGAAGTTCTAATCTGAGGCAGCATCGGAAAGTTCACAAACCAGATAAGACATATAAATGCAATGAATGTGGAAAAGCCTTCAGCCAAAGGTCTACTCTCATCCAGCATCAGAAAATTCACGCTAGAGAAAAGAGTACAAAGGATGTTCTCCCTCCTTCAGCACAACAGCACCTCCTAGAGATGAACTCTGAGAGTGGTCTTTATGAAGGAGCTGTCAGCCAGAAGTTAAATCTTGTTCATCCAAATATCTATGCTGGAGAGATTCCCAATGGATGCTAAATAAATTGGAAGCTTTCTGGAGAAAGCATACATTTTCTGATCCCAAATTTTGTCAGAGTTTTTGTCACTGCTAGTATCTGTGGAAGAAGTCATCTCAGCTCTACCCACTGGCAGGTCTCCAGAGTGTGTGCCAGCCACTTCCTGTTCTCAGAGAAGACAGGCCTCTGTTTCCTCTTTTGAGACGGAATTGTGAGTAGCCTGAGGCCATAGGAAGATGTCTTCCCTTCCACTGTGACTGCTTTAGCTGTGATCATGACCCATCTTTGCCATGAAGACCTGATCTGGGTCCTACTGGCAGCTTGCAGAGGTTTCCCTTTTCCAAGGACATTGTTGATCTTGTATGATGCTCATGATGGATTCATCCAGCTTCCACATTATCCATCCTTGACTTTACATTGCTCTGGTTTGGGTGATAAGGGCCTTATTGATAAAATCACCTTTAATCTCCTGTATTCTGACAACTGTGTGGAGTGGGTTGAGAACAGGATGAAGGTCTTGCAAACCAAACAAGTCTCCAAATTTATTGCCTCAGTGAAGAGTGGGATGGCAGAGAACAGTTCTCAGTCCAGAGTTGGCCTCATTTGTGTTGCTACCTGAGGTCTCCTAGGGAAGATTATAGGGCTTGGTCGGCCTAATGTTGTGACCTGAAGGGCATGACTTTTTGTAGATCAGAGATTACCTTGAGGAAGGGAAGGTTGTGCAACTGCCAGTGTATCTGGAAGCAGCCTGATTTAGCCCCCCCCCCCTTTTTTTTTTCCTGAGGATGGCTTCTATTCCTTAGCACTGTCTAGTAGACATTGTTTACCTGGCCTCTGCCAAGGAGTCATATGCCTTTGATGTCTAAAATCCAGTATAAGTCACCTATTGTAAGACTTACTGGGTCCAATTGGCAGATTAGAGGGAATGTATCTTACAAAATTGCATCCACAAATGTTCCCTTAAATGTAACTATGCAGGATTCAGGACTTGAAGAAATTCTCAGGACCTCCAGACCTCTGTCCTATGACTAAGGCCACTGGCAGAGGAAATCAGCTAAAGGTTTTGTGGATTATTGCAGGCTGTCTGCATTATTCATGTCAAAACCAGTGTTGTGTTGGCAGAGAAATAGGGACTAAGAGAAGGTATATCTTGTAACCCAGGGAGGAGGCATTTGCAACACAGCCAACTATTTTTGGTGCCAACACATGAGGAGAGAGGGAATATGGAGGTGCCAAATCTTAAATTTTCTAAAATGAGTGGGAGAGCAGATTTTTACTTGCAACAATTTCTTTTAATGCTTTGTTGAGATATAATTTCTATGCAATAATTGGCTGTACATATTTAATGTGTACACTTTGATAAGTTTTAATATATGTGTACACTCAGGAAACGAACACCACAACCATAATAATGAACCCATCCGTCACCCACATGGCTACCTCGTGCCCCTTGACAATCCATCCTTGCCTTCCCCAGAGAACTGTTAGCTACATCCCAAGGAAACCACTGATTTACCTTTTATTCACTGTGAATTTGGTTGCCTTTCCTAGAATTTTGTACAATTGGAAACATAAAGTATTTATACTCTGTTTTTGGTCTGTTTTCTTTCATACAGCATAATCATCTTGAGAATCATCCATTCTGTGAATATGAAGAGTTCATTCCTTTTACTGCTGAGTAATCCTCTCCTGGGAACTTCCCAGGTGGCAGAATTGGTAAAGAATTCACCTGCAATGCAAGAGATGTGGGTTTGATCCCAGGGTCAGGAAGATCCCCTAGAGTAGGAAAAAGCAACCCACTCCAGTATTCTTGCCTGGAAAATTACATGGATAGTGGAGCTTGGCAGCCTGCCATCCATGGGATTGCAAAGAATTGTACATGACTGAGTATTTACACACACACACACACACACACACACACTTCTCTGATGAATGAATACCTTAACTTTTGGTTTTTTAATTAAAAATATCTTATAAAATCTTAAACATTGTTAGGTATACAGTTTAATGGTATCAAGTATAGTCACGTTGTGCAACTATCACTACTATTCATCTCCAGAATTCTTTTCATTTTGTAAAACTGAAACTATATTCATTAAACAATAACTTCTTATCCCCCCA EMBV3_03182 GGGTCAGTGCTTTCACGGTTCTGAGCCTCCGTTCCCCCTACTTCGTAAAACAAGGCTTAA Gene BVT0102_107702 + 1 EMBV3_29986 GK000017.2:62365248-62526416 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081269 1 XLOC_050149 NonCoding TCONS_00081269 XLOC_050149 NonCoding NonCoding - 17:62368134-62369022 - TSS61209 888 2 TCONS_00081269_3 109 1 0 7.66086344493827e-05 0 0 0 5.55988194662257e-06 6.44514761793366e-05 0.000157614005587016 0 4.44263506571782e-05 0 0 0 0 0 0 0 0 0 0.000104979847704459 4.8590769867383e-05 3.41861054284637e-06 0 0 0 2.34070709732751e-05 0 0 0 0 0 0 noncoding 0 0 0 0 0.063298889228798 0.636460398768342 -0.0089900039837327 0.874545543257577 CCTTCCTCCCGGGTCCCACCAAGCTCGAGGGAGCCGCGTGTGCGCTCACGGGCGTGCGTGTGCTAGTGTGTGTGTCTGTGTGTAGAGCCTCCCTCTGAATCTGAGCTGTCCTAGAACCCACCCTTCTTTTGTGGGGCAAGTTCCCGGCGGGTAGGCCCTTCCAAAAATTCCATCCAAGAAGGAAAACCCTGGTGCTGACCTTTCCCATAAGCCAGCAGACAGGCAGCCGCCTTTGGGCTCTGCGAGAAGCTTGAAACGCTTCGCGTCCGTGCGCTTTTCTGCCTCGCTGGTTTCCAATTTTGACCTCACGGCAGCCAGCCAAAAGAGTGGCTGTTGGGGTGCAGATGCCAGGCCTCGATCGCGACCTGGCTCTTAGATACAGAACTCTAGAAAGTTCGTACCTATGGGTAATTCTTTGGGCATTCTGGAGCCAGGAGCTACAGGTGTTAGAAGTAGATGCGTGTGCGTCCGCGTGGACTTGTACGTGCCCTACCAGGAGACGTCTCTTCCAATTTGTATTTCGAAGTTGCTGCGCAAGACAGTTCCGGATGTAGATGCCTCTGGTTGTTTTATAATCAAGATGCGTATAATCAAGATGTATATGTTGCAGATGTCGGCGTTCAAAGTACACGAAACAACAATAATAAAATGAGCTGGCAGACCGGGGCACGTGCAAGAGACAGGCACTGGGTTCAGCGCCCCACAAAAGAGATCGCCTTTAACGCCGCCTCACAATTAACCCTATGGTGTGCGCGGACGACCTTTAAGCCTTGTTTTACGAAGTAGGGGGAACGGAGGCTCAGAACCGTGAAAGCACTGACCCGGGAGCGCCCGGGGAAACTGGGAGCCGGCATTTGAGACCAAGTGGGCCCCGGAATCCACTTGAAC TCONS_00075790 TCONS_00075795 TCONS_00075791 TCONS_00075792 . 3' 2823 TCONS_00075790 TCONS_00075795 TCONS_00075791 TCONS_00075792 . 3' 3710 EMBV3_21424 TGGCCGGCCTCAACCTGCACCCGCACCCGGGCTTCTCCCACCTGCCCAGTGGGCTGTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08434 GCTGAACTTCTCATGTGTGCGCACGACTGTGACTTACTCCCCTTTTACAGCTTGGTAAAG Gene GeneID:533438|TFB1M:NM_001076896:5_cdna Constitutive 3 NULL GeneID:533438 9 GENE TFB1M NULL transcription factor B1, mitochondrial EMBV3_43270 AGGTCCAGAGGACCATTGTCTGCCCCATCTGCCGCTACGTCACCTTCCTCAGCAGGAAGA Gene GeneID:524368|RNF222:XM_002695873:372_cdna Constitutive 0 NULL GeneID:524368 19 GENE RNF222 NULL ring finger protein 222 EMBV3_19386 GTTCCCCGCAGGAGGTGCTGACCCAATTCGCTGCCAAAAGAGAGTCAATCTGAATACACA Gene GeneID:539299|SPATS2L:XM_002685501:14_cdna Constitutive 1 NULL GeneID:539299 2 GENE SPATS2L NULL spermatogenesis associated, serine-rich 2-like EMBV3_30938 GTGAAACTGGCCTGGGTGGGGACCTGTATCCATTCTTCAGCACAGATTCTCTTGGCTTTG Gene GeneID:788089|LOC788089:XM_002692020:22_cdna Constitutive 0 NULL GeneID:788089 13 GENE LOC788089 NULL similar to olfactory receptor 1183 EMBV3_09705 GCAGCGGGGAGGAGTCCTGGCTGGGCTGAGCGGAAGATGCTTCAGAAAGAGCTCAACCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13002 ACACAAGACTACATTTCTTTGATGACCCAGCATGGCTGAGAGGTTCTGATTCACCTGCTG Gene GeneID:281427|PRNP:NM_181015:8_cdna UTR3_Alt 1 NULL GeneID:281427 13 GENE PRNP MGC140197 PrP prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) EMBV3_02005 AGCTGAGACTCTATGACCATGACGAGCTGACCAAAGTGTCCAAGATTGTCCAACACCCCG Gene GeneID:789799|LOC789799:XM_002697910:530_cdna Constitutive 0 NULL GeneID:789799 25 GENE LOC789799 NULL similar to mast cell protease-11 EMBV3_41153 TGGCTGTGGCCTACCTGCGGATTGTGCTGGCAACCATCGCCTTTGTCACTCTGATCCTCA Gene GeneID:515742|TMEM150A:XM_002691366:221_cdna UTR3_Alt 7 NULL GeneID:515742 11 GENE TMEM150A TMEM150 transmembrane protein 150A EMBV3_27443 CACCTTCTTCATGGGAAAAGTGGCCCTGGAGAGGATTTGGAACAAGCTGAGACCGAAACA Gene GeneID:617441|C14orf153:NM_001076459:309_cdna Constitutive 2 NULL GeneID:617441 21 GENE C14orf153 NULL hypothetical protein LOC617441 EMBV3_08143 ACCGACAAAGACGCTCTCCTTGACCACAACTTGGGCAGGCTCTTGCGAGATCTTTTCTCA Gene GeneID:541294|PLA2G2F:NM_001102522:263_cdna UTR3_Alt 2 NULL GeneID:541294 2 GENE PLA2G2F MGC159947 phospholipase A2, group IIF EMBV3_05018 CTTGTTCCTCAGATAAGAGGGGCAGAGATGAGGTCCTTCTGGACCGAAAGCCAAAAAAGA Gene GeneID:509799|BAZ2A:XM_002687418:157_cdna Constitutive 2 NULL GeneID:509799 5 GENE BAZ2A NULL bromodomain adjacent to zinc finger domain, 2A EMBV3_07589 AACTTGGAACACCTCAAGATTCACCTGAATTGAGGTGCACGTCCAGCAAGCAAACCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00224 GTGGGTTATAATTCATCTATACAGATCAAGAACTTGAATGGAAGCTAGCAGAAGTTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17104 CCCTGCCAATGCCGTCTACTTCTGTAACAGCCTGGCACTATCCAGCCTGAACAAGCACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28025 GGCCCTCAAGCTGCCACCAACAAAGACATCAACAGGAAACTAGACTCTGTAAAACGACAG Gene GeneID:100298036|LOC100298036:XM_002698952:67_cdna Constitutive 0 NULL GeneID:100298036 28 GENE LOC100298036 NULL similar to excision repair cross-complementing rodent repair deficiency, complementation group 6 EMBV3_37699 CTGCTGGGCAAGAATTTTGTGTTTGGAAGAAAATCCAGAGTGGTGGACCTGAACCTGCTC Gene GeneID:613787|PDGFC:XM_002694441:13_cdna UTR3_Alt 2 NULL GeneID:613787 17 GENE PDGFC NULL platelet derived growth factor C EMBV3_23993 TGCAAGACGAGGCCAGTTACGAGAAGGACTTGACAGATCCCATTTCCAAGGAGCGACTGA Gene GeneID:510502|EVPL:XM_002696172:142_cdna Constitutive 0 NULL GeneID:510502 19 GENE EVPL NULL envoplakin EMBV3_41099 ACTGGCCTACATCATCATTTCTGTTAGTTTTGAGGCGGTGGTATCAGGACTGTTCTATCC Gene BVT0101_011607 - 0 NULL GK000002.2:28017776-28309803 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26425 CATGCACCTACTTATTCAGCTAGAGCAACTTCACCCAGGTTCTTGGTTTTAACTGCTACC Gene BVV0101_047876 + 0 NULL GK000001.2:57169465-57178553 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24062 CAGTGCCATCGGCCTTTTTGGGGTCATCGTAGCAATGCTTCAGAGCTCCAGTGTGAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30566 TTCTGAAAAACACGGTGATCCTTCTCTACCCGTTTGCACCTCTCATCCTGCTCTACGGGT Gene GeneID:513629|UNC50:NM_001014921:59_cdna Constitutive 0 NULL GeneID:513629 11 GENE UNC50 NULL unc-50 homolog (C. elegans) EMBV3_36967 ACTGCGTACCCCTGCCATCACCCTGAGAAAGTAGCCGGGAAGTGCTGCAAGATTTGTCCA Gene GeneID:533631|CHRDL2:NM_001046356:28_cdna Constitutive 0 NULL GeneID:533631 15 GENE CHRDL2 MGC128960 chordin-like 2 EMBV3_05155 AAAGAACGAAGCCATAAGTAGTCAGTGAGACACGATCACAGAAGCATTCGAGGTAGTGGC Gene BVT0102_012902 - 1 EMBV3_21759 GK000004.2:47228659-47306856 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183884 TCONS_00183885 1 XLOC_111227 NonCoding TCONS_00183885 XLOC_111227 NonCoding NonCoding - 4:47292177-47294901 - TSS137060 1444 2 TCONS_00183885_4 71 0.263850415512465 2 0.470437017994859 1.10569996067789e-05 0.000180926002033523 0.000165290089565213 1.82777276829347e-12 2.05577465390639e-05 2.14690170557841e-05 2.52030830867612e-05 6.37464794405964e-06 8.0151771447763e-11 0 6.58074389116202e-11 0 0 1.30268597146358e-05 4.92355496682497e-11 0 0 0 3.4214352574657e-09 1.99153075990841e-05 3.04154885002652e-40 0 0 0 0.000625483973663934 2.97356908113394e-10 7.35929594209206e-05 0 1.93971743067252e-10 0 0 noncoding AGGCGGGGGCTCCACCGTGGGGAAGGAAAGGAAGGTGTTTCTGGGATCTGGGTGCTTATGACTCTCAGTGTTCTCAGCTCAGGGTGTTTTCATCTCCCTAATGAGCACCAGCACCTGCTAGCAAAGCAGTCAGCTTGCCTGTGGGGAAAAAAAGGATGGGATGAATGAATGCTCTGTGCTTTGTTTGGGGGAGAGAAGAGCCCCAACCCTTGATGGATCCCTAGGGCAAAGGCCTGAGAAGAGGGGCTGTGATACTGAGGGGGCCAGCACCAGTGTCTCTGCAGTGAGAGCCCCCCCTAAAGACAATGGGTAACCGGAGACCAACAGGGCCCGTTTCCCAGTGAAGAGCTCTATGGTAAAGCTGGCCCATGGAACCACCCACCAACTTAGACTGAGGCCTGAGGCAGCAACCTGAGAGCTCAGAGGCCCTGGCCTCTCGTGGCTGGAGGTCTCCTGGGCTTCATGGCAGGGGGCCCCATCACACAGGTCTGGACCCCTTGAGTCTTACCAGTGCAGCTAGACTCTGGTAAAACTGAAAAGAAGAAAGGTTTTATTCAATGCCCTCAGTTTTGGATGTTTCTCCAACAGATTTCCAGGAGAGATTTTTTTTTCCTTTTTTTTTATGTGTGTTCCCCATCATGAACCCTCCTCCCACCTCCCTCCCCATCCCATCCCTCTGGGTCATCCCAGTGCACCCAGAAGAGAATATTCCAGCAAACAGTTATTCCCGGAAGTTGAACATTGACATAAGAGACATGGAGATGGTCCAATGACGATGGTTATGTTAAATCAAGATGGGGGAAGTGTGCCAATGAGTAGGTGGAAAGGCAGAGAGAAGCTGGAGACAGGAGCTGACACACCGAGGAGAGCCGGAGGCCCCAGGAGAGAGGCAGGGACAGCCTGAGACGCCAGCACCCCAGCTCCACGCCAAGGGATCTAGAGTCTTCATTGCCAGCCTCAGTGTCTGGAAGTTGTGTGTTGAATCCTTATGTCCTGACAGTAGCCCCTGTTAAACTCAACTAGTCTGAGTACTTCTGTTCCTTGCAACTAAATAGTCCCTAAGACAATGTGATTGGGCAAGATGAGGGAATAGATGTCTAAGACCCCCAAAGATAAGCATATTGCAAAGAGAGTTGTCAGGATGTCTGTGATTTACTTTGAAATACTTCAGCAAGTAGGGTCAGTCCTATCGTGTGTGTGCTGGTTCATTTAAGCTTTAAGCTTCTACTCTAAGGACCATCGGTTGCTCTAATGGAAAATTCCACTCCAGAATAATCAGCTAGGATTTTATCAGAAAAGCCGCATTCCAGAAGCCACTACCTCGAATGCTTCTGTGATCGTGTCTCACTGACTACTTATGGCTTTGTTCTTTAGCATAGTGAATGTGAGGAATGGATTTTTATTGTTGAAATTAGTTCATTGTTAGTAAGACGAACATTAGAAG TCONS_00181485 r 5' 26627 TCONS_00181485 r 5' 24610 EMBV3_41357 ATTTTCATATGTCCAAATCCTCAGAGCAGTCTTCCACCTCCCGTCCTGGGATGCACGGCT Gene GeneID:513532|LOC513532:XM_002693184:163_cdna Constitutive 0 NULL GeneID:513532 15 GENE LOC513532 NULL similar to Olfactory receptor 678 EMBV3_30431 CAACACCCACCTGAAGCACCCTGCAATCAGGCAGTTGCAGTTCTGGAGCATGGAGTTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09362 AGCCAGAGCTACGTTCATTGTGGTACACAGGCTTCTCATCGCGGTGGCTTCTCTTGCTGT Gene BVV0102_167348 + 0 NULL GK000018.2:52867683-52922245 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07128 AGTATAATGCTGTGGTGGGGCCAGGGTATCCAGTACAGTGGGTAGGAATTTCAGGAACAC Gene GeneID:100337119|LOC100337119:XM_002700124:55_cdna Constitutive 0 NULL GeneID:100337119 X GENE LOC100337119 NULL WNK lysine deficient protein kinase 3-like EMBV3_43776 ACATTCTTTTGAATTATGTCCATAAAAGATTTAAATATACAAATCACAACCCCCAAACCC Gene BVT0102_142466 + 0 NULL GK000003.2:43386389-43404022 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34107 GGTGGGCACAATGGAGAATGTCCTACTTGGGAGGGCAGGAAGAAAAACTGGACAGTAAGT Gene GeneID:100138178|UBE2Z:XM_002695907:252_cdna UTR3_Alt 4 NULL GeneID:100138178 19 GENE UBE2Z NULL ubiquitin-conjugating enzyme E2Z EMBV3_16078 ATGTTTTAACTGTGGGTCAGTGGGCACTTCCCTTGCATTCTGCTCTTCCAAGCACGTGGA Gene GeneID:523427|GINS1:NM_001083701:1144_cdna UTR3_Alt 2 NULL GeneID:523427 13 GENE GINS1 MGC152152 GINS complex subunit 1 (Psf1 homolog) EMBV3_11637 TTGAGAAGAGAGAAAACCTCCTGACTGATTCTGGCTGGTCATCCCAAACTCCTCTCTGCG Gene GeneID:512570|LZTFL1:NM_001034425:113_cdna Constitutive 2 NULL GeneID:512570 22 GENE LZTFL1 MGC128583 leucine zipper transcription factor-like 1 EMBV3_04765 CACTGCACACTTACAGCACTCCGTTATATTCCACTGGAGGCCTATTAGGAAGCACTTACC Gene GeneID:509181|JKAMP:NM_001080247:76_cdna Constitutive 1 NULL GeneID:509181 10 GENE JKAMP JAMP MGC139345 JNK1/MAPK8-associated membrane protein EMBV3_13517 CCGCACCGTGGGCAGGCGGAACACGTTCATCGGAACCCACCGCCCAGGCTCAAGTCCAAG Variant GeneID:519558|MINK1:NM_001099376:120_cdna 769^940 1 EMBV3_00009 GeneID:519558 19 GENE MINK1 MINK misshapen-like kinase 1 (zebrafish) EMBV3_37854 TGGTAGAGAGCGAGGGAAGCCTGACGGAGAACATCTGGGCCTTTGCTGGCATCTCCAGGA Gene GeneID:789769|SH2D5:XM_002685723:434_cdna Constitutive 0 NULL GeneID:789769 2 GENE SH2D5 NULL SH2 domain containing 5 EMBV3_30409 GGTGAGAATGAATGTGGACTGCCTTGCTACCCCTGAGCGGGTTACTCTGGATGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_01638 ACTTTGCATCTGTCTTAACCACTCACTCTGGACGCTGGCCAGGACCCCCAGGAATACTCT Gene BVT0102_128385 + 0 NULL GK000019.2:55855310-55893570 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32414 GAGTCTTGAATTCTCTTCTGGCCTGTGAGTTTCTCCTCCAGAACGGGGCAAACGTGAACC Gene GeneID:508582|ACAP1:NM_001103234:51_cdna Constitutive 0 NULL GeneID:508582 19 GENE ACAP1 CENTB1 MGC157219 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 EMBV3_34487 ATGGAGAGTGACTTTTACCTGCGTTACTACGTGGGGCACAAAGGCAAATTCGGCCACGAA Gene GeneID:505417|MAGOH:NM_001034245:16_cdna Constitutive 0 NULL GeneID:505417 3 GENE MAGOH MGC128400 mago-nashi homolog, proliferation-associated (Drosophila) EMBV3_08288 CCAGCGAGGGAACCAGGTCTCTTTGGATTTGCAGTGTTAGTTAGGACGTTCTTTATTTCC Gene GeneID:516550|FEM1A:NM_001046226:36_cdna Constitutive 0 NULL GeneID:516550 7 GENE FEM1A MGC137753 fem-1 homolog a (C. elegans) EMBV3_34311 AAGACTTGGAGTTACCCTGAGGCCTAGACATTATGGAGCAGATGAAGAGCCTGGAGGGGT Gene GeneID:782400|LOC782400:XM_002686817:63_cdna Constitutive 0 NULL GeneID:782400 4 GENE LOC782400 NULL hypothetical LOC782400 EMBV3_08943 CCATTGGCTTTAGTGGTAAACACTTGGAACTCATATGTCCTTTGACTGCAGCATGGAGTG Gene BVT0102_326649 + 0 NULL GK000003.2:49474287-49541294 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34615 CATCATGACAGTGAGTTGGAGCAAAGCAGAATACTGATGGATGATTTGGGGCTGAGCCAG Gene GeneID:537689|LACE1:XM_002690118:135_cdna UTR3_Alt 2 NULL GeneID:537689 9 GENE LACE1 NULL lactation elevated 1 EMBV3_08164 TATAGCGCGGAAGCCGCTAAGGCCGGACTCGCTGGTCATATACCGTCAGAAGTGCGAGTT Gene GeneID:100337320|LOC100337320:XM_002683940:15_cdna Constitutive 0 NULL GeneID:100337320 Un GENE LOC100337320 NULL hypothetical protein LOC100337320 EMBV3_37536 TGTTACCACAAGAGGCAGAAGAAGAAAACAGATCTGAAAATGAAGCTGAAGAAAAGCAGG Variant GeneID:510042|STARD3NL:NM_001075427:39_cdna 669^764 1 EMBV3_37939 GeneID:510042 4 GENE STARD3NL MGC140610 STARD3 N-terminal like EMBV3_37523 AACTGCAGCTCCCAGGCCGTCTTCCCAGCCCCCTACGTGGCCACCCTGCTGCTCTCTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00594 GTGCGTTACTTTGGCAGCAAGGGGCAAGGCCGGCAGGAATTTCCCTCCAAAAACTCTTAA Gene GeneID:618089|LSM10:NM_001083781:316_cdna Constitutive 0 NULL GeneID:618089 3 GENE LSM10 MGC155164 LSM10, U7 small nuclear RNA associated EMBV3_19808 ACAATTTTTTTAATGCCCTATGCTGCCTCCTTCGTGCTGACATGAGCCTGAGCTGGAGGC Gene GeneID:100300550|LOC100300550:XM_002699981:62_cdna UTR3_Alt 1 NULL GeneID:100300550 X GENE LOC100300550 NULL similar to cytochrome c oxidase subunit VIIb EMBV3_36316 CTGTATATAATAGTTTGCATCTGCTAATCCCAGACTCCTAATGCCTTCTTTCTCCATCCC Gene BVT0102_110289 + 0 NULL GK000005.2:82812861-82875250 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35152 GCAGCACATCCATGAAAGAATTGAAAAAGCCATACACAGGTCCAAGGAATATGGATGCCC Gene BVT0102_229416 + 1 EMBV3_37221 GK000003.2:54190131-54201290 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01455 CCTGATGGTGTTCCCTTATTAGACCCTATTGATGACATGGGCATTCAGGATCAAGGACTG Gene GeneID:520256|SKIV2L2:NM_001099012:70_cdna Constitutive 0 NULL GeneID:520256 20 GENE SKIV2L2 MGC157091 superkiller viralicidic activity 2-like 2 (S. cerevisiae) EMBV3_23432 AAGCTCACAACCACCATTACAGACATTTGGCTAATTACTACAAAACTGGGAGTTTCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36425 TGGCTGTGGTCTACTCGGTGCTCACACCCTTCCTCAACCCCTTTATCTATAGCTTGCACA Gene GeneID:517209|LOC517209:XM_002685907:150_cdna Constitutive 0 NULL GeneID:517209 3 GENE LOC517209 NULL similar to olfactory receptor OR1-22 EMBV3_37414 ATACCAGGGGTTGGACTTCCAATATAGTTCAACCCATTACACTGTTAACACTATTTTTTC Gene GeneID:790881|ZNF829:XM_002694955:92_cdna Constitutive 1 NULL GeneID:790881 18 GENE ZNF829 NULL zinc finger protein 829 EMBV3_42419 AAGAGAGTCTTCAGTGAGCTCCAAGAGAGGGGTGTCTACAAAGCCATGAGTGAGTTTGAC Gene GeneID:281246|IL10:NM_174088:7_cdna Constitutive 0 NULL GeneID:281246 16 GENE IL10 NULL interleukin 10 EMBV3_30018 TGAGTGGATGGAACTCAAGTCTGAATGGCAGAAGAGCGCCTATCTCAAGGACAAGATGCG Gene GeneID:767855|TBRG4:NM_001076967:64_cdna Constitutive 0 NULL GeneID:767855 4 GENE TBRG4 MGC127551 TBFG4 transforming growth factor beta regulator 4 EMBV3_08864 GACCTGGAGCTCCTGCTAGGCATCGCCAAGCCTGGCTCTGGCCCTTCAAGGAGACTGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22626 GCCCGGGCCTGGACTTTGGACATTTTCCCCTATTTCTCAGGTGTTTAAAAGCTGTTTCTG Gene BVT0102_034059 + 0 NULL GK000011.2:13397286-13405925 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024107 TCONS_00024108 1 XLOC_014443 Coding TCONS_00024107 XLOC_014443 Coding Coding PAIP2B 11:13357540-13403123 j TSS17773 6387 4 TCONS_00024107_2 124 0.0829810552685142 4 0.859966653503576 0.000831407497754891 8.3427651054204e-05 0.000760653433884651 3.33711223031239e-08 0.00131801394385658 8.7664156955096e-05 0.000416904270557049 4.88438543915415e-05 3.14585419416284e-08 6.75794582066831e-05 1.88610074654155e-05 2.95123937671936e-05 0.000112752919235393 0.000123706163015251 0.000119716762170741 0.00321557877715151 0.000315817561131732 0.000407051414762852 0.000570007273340679 0.000410118285192877 1.22565959566979e-08 0.00114949826559854 7.51104416756159e-05 0.00123519200542307 0.00090245652152422 0.000679304908827693 0.000322928181737208 5.23747983346454e-05 0.000326058887498721 0.000282964713201234 XM_001256216.5 PAIP2B PREDICTED: Bos taurus poly(A) binding protein interacting protein 2B (PAIP2B), transcript variant X1, mRNA. 0.0 1.116e+04 99.97 0.968999530295914 NM_020459.1 PAIP2B Homo sapiens poly(A) binding protein interacting protein 2B (PAIP2B), mRNA. 0.0 1600 76.80 0.344762799436355 TCONS_00024107_2 sp|Q9ULR5|PAI2B_HUMAN PAI2B_HUMAN Polyadenylate-binding protein-interacting protein 2B; 6e-80 235 93.50 0.983870967741935 1 coding 0 0 0 0 -0.156872338226213 0.313116165836747 0.0035976197161538 0.939474368770444 AAGAGGTAACCTGACTAGGGGTAGAGGCGCTCCCCCGGTTCTGTGGCTCACGCTTTGGTACTAGGGACCGAGACTGTTCTGGCGACGGCGACCTCTGCGGCGACGGCTGAGATTCTCGAAAGAGTAGAGGAGGACGGTCCGGAGGAGGGGCTTCTAGTTAACGCAGGTTCTGTCATGATGAATGGATCCAGTGTGGCGAATACATCACCCAGTGTAAAATCCAAAGAGGACCAGGTGTTAAATGGGCATGATGAGAAGGAAAACCCATTTGCAGAGTACATGTGGATGGAGAATGAAGAGGATTTCAACAGACAGGTGGAGGAGGAGCTGCAGGAGCAAGAATTCTTGGACCGCTGCTTTCAGGAGATGTTGGACGAGGAAGACCAAGACTGGTTTATTCCATCACGAGACCTGCCTCAGGCCATGGGACAGTTGCAACAACAGTTAAATGGACTGTCCGTCAGTGATGGTCGTGATTCTGAAGATATTTTGAGCAAAAGTAACCTGAATCCGGATGCCAAGGAATTTATACCAGGAGTGAAGTACTGAGCTGACAGAAAGCTTTGAGGAGGACTTGTGTGTCCCCACATCTGGGGACAGCGCTGCACAAGAAGGCGGAGCTGAAGAGGGGGGTGGGATGGGCAGGGGGTGCGCAGCGGGGAAGGGAACAGTGGTTCAACTTGACACTGTGACTAGAGTAACTGATGTGCTCAGTCTTTCTCTACAAGCCTCTGAGTATTTCTCTTTTGTTCTACTGACTTTCATTTGAAGCAATTTCCTATTATTTTTATTAGCTTTCGATTTAGGGAAATTGCAGTCTTTCCTCATGCCCTCATCAAGAATGTTCTGCTGTGTGTGTTTAAAAGAATAAGCTGACCAAGAAAATCTGGGTGTTTACAAATGCCCTACCCACCCTGCTGTCTACTTACCAAGGGCAATGAACACCTGGAGCACTACATATTCAATCTGTTGCGCTGGATGGGAAGAGGGACAGTTGGAAGAAGCAGGTTTTGTAAACCAGAGTACTCAGCTCCCCAACCCCTGGGGGTTTCCTGCAATGTGCTGGGATTACCACTGGCCTGCTGAGCCCGTGTCTCCTTGCCTGAACCCTATTCAAGAAAACACAGGCTTAACAGTACTGGTTTACCAGTACTTTAGATGGTTGATAAACCGACTTTCATCAGCCATCTTTTGGAGGACTGGGATGGTGGTGTCACTTGAGTCATTGATTTACTGTTGACCTACTCTTAAGCCTCTGTTTATGGCTGCCATCAGACTCATTATTTACAAGGCATAAGAGTTCTAGGGTGGATTTGCCACCTCGTCTCTCATGGTGTCTAATCCCCTGTCTCCTTTCTGCCCTGAACTCTATTCTGTTTTTAAGAAGAGACTGTTACCAAAGGTGTGTGAGAGGCATGCGGTGCTGGCCATCAGCTTCAGTCTGGAGAGATCATCCTTGAATCCTGATAGTTATCATCTTAAATTTATTTTGACAGTTTTTCCTAGCCCTGTGAAGACTTGGTCCACCTGTATCTTCCTTTCCTTAGAAAGATTGTGTACTTTTATAAGTCCATGTATTTTTCAGAACACTAGCAAGAAGCTCCATTCACAGTTTGATGCTTCTCCCCACCTTACAGAATTATGCAAAAGAACTCCAGAAAAGCCTAGGAGAGTGAGTCCCGCTTGACCCTGTGACTGTGTGACGCACCGGGACAGTTTCAGCAGTTATAAAGTTTTGCTGTTTCCACACACCCAGCTTTTTGAGTTTTCTGGGTTGAACTTTCTGGGTATATTCTTTTCCTGCCCACAGGTCACAGGTGTTTTGGTTATTGTTGTTGTTGATACTCATAAGGAACTAAATTGGGCACCAGGATATGCCTTTGTGTGCTGGAGAGGTTGGTGGCAGAGTCAGGTCTTAAAAAGAGCGTGTCTGGTCCTGGCCATTCTCCCAGGATGGGCAAGGACTGGCAGGGGCCTGAGGAGAACAGTGGCCCGTCTGTATGACCGCCACTGTCTTGTATGACAAGCGTGTCAGGAAAAGATCATGGAACTTGAATAAAGTCTGTAAATTCAGTATGTGTTTATGGGACAGAGGTTGGAAGGAAAGGAGTAGGGTCTGGAAAACTTAAGAATTTCTCCTTTCTCTTACGAGGTCCCTTGCTGACTTTTCTAACAGCCACAGGTTAATGTCAGATTGAAAATATGAACCCATATTTCCAGATGGGCTCCTGAATTCACAAAGCCTCTACCTTGACAGAATGGAACTCTTTTAACTTGTGTTCAGGGAGGGCTACAAATAAAGAAACGTCTTAATTCCAGCTTCAGCTTTCAGCTGGAATGGTTGCCTCTGATAAGGCGAGGACCTTGGAAGTGTAGAAACAAAGGTCTCTTTCTTCCAGGACTGCTGTTCCTCCTTCAATCTGCATTAACTTGTCCAAGCTCGGAATTCTAAAGGCTGCTCAAAGTGTGTTGGGATTGCAGCAGGAGCCGTTTTCTAGACCATGGTGTCTCCATCACGGAGAGAACCTCGGATTCTTTCTTATGTGGCTCCTGGTCTAGGAAGTCCTTCAGGGATCTGCATCAAGGGTCCTCATCCTGACGAAGGCGTGCCCTTCTGACACCTAGGCTAAGCTGTTAGGTGTGGTCCAAGTGGCTTGCTTCCCCTTCTGCTGTGGGTTTCATCTTAGATGTCAGCATGGTTTCACAAGGCGTATTTGGTCAGGACTAAGAAAGCTTCCTGCCAGATAAGCAGTGGAACCTGAGGACTGGCCTTTCCAGTCCTGTTGAGACACAGTGTGCTGACCCCGGGATCAGGAAGCGGCTAGCAGGGTGACCACCTTTTTAATGTGTGTGTTTGTGCTTCTAGTGGTTCCCCTTCATTCTGACTTTTCTCCATCTATTTTATGTTGCGAGGTGGGAGCACTGTCGTCACCCAGACCACGGGTCCAGCTGTAGTCCGTTTGCCACCTCCTTAGCAGGAAACGCATGTGGGTCTTCCTGGGTCTTCAGTGAAGAAAGGCTGGACTCAGACTTTTCCTCATAGGAGAGATTACGGATGCAAGCCAGACTAGATACCATTACCTTTTCAGGATGAGGCTGGTATTATTTTAAGTGATGATTTTGATGTTGAATTTAAGCCACTATTCTTTTTTTGGCACCTGGAAGTTTAAGTATAGAAACAGAACATGTATTTTTAACAATTGCTAATTCTGACTAGTCCCAGTCTTATTTTATTAGTGATTGATTTTGTGGTTATTGGACTCTTAAACTCCAAAACGAAAAGTATTTTATCTCTTGCTCTTCAAGGAGAAAAAAACAAAAGAAATGCCTTTTAGTTTCTCTAGCCCTTTGAACTGCAACAGAGAATTTGATGGACATAGCCTAGGCCTGAGCAGCTGCAGCTTTGGGTCTTTGGGCCAGTTTCTGACTGCAGCAGTTGATTTTAGGGTATTACATAAGGTCAAACCCCTAAAAATTGTAAGGAAAAGGCTGGACCTTTGCAGCACCTTTAGTTTCCAAAGTCAAAACAGCTTGGGTCTCTCTTATTAAAGTTACAATGCTAATTATGACTTTAAAGTGTTTTTAGAGGTAATCAGCATTTTTCAAATTGTGTATTACTATAATGGCAAAGTTCTGTCTTGCGTTGGGAGATGCTGGGAGGTAAGGTCAGTCAAACACTTTGACCTCAGAGTGTAAATTCATGTATGTCAGGGAGGAAAGTTGTGTGAAGAAGTAGCCAAAGGAAACTGCATTAGTGCTGCTGCAAAGCCAGTATGTAAACACCAGGAGCCCAGGACTCTACACTGCTGAGATGGGAGGGGGCACGTGTTCTTCGCTAAGGGTCCTGGCATCACGTTTAATGGTGTTGTTTGATTTGGATTATGTTGATGTATGAGCTCAGCCAGAGACCTGACAGTTTTGACCAAGATTTGGAGAGCATTTGGGAAAGACTGTATATCCCTGGCCACTCTCTTCCGGAGTAGATGTAGAGCTCATGAGTTTGGGAAGTGGGTGGAGAGCAGGAGGACTGACTGAGGTCTGGTGAGCATCAGGAGTGTTGGTTTTCCCCTCCCTTTGCCCACAGTCACCTGTGTGAACCATGTGAATCGTTTCCCCTCTCATTGCCCACACAGATTGTTAGTTCTCCTGGTCCCCGTGTGGTACAGTGTACTTTCTGCAGCCACTGCCCTGCTGCCTTGCAGATTTCATCCACAGGCTTGGTTAGTCACAATTTAGTAAAGTTTTTTCCCCTCTGTTTTTAATCTTCTATTTCTCCCATCTTGAAGCTGCCATTAGTGACAAAGGACGGAGGAATAGGAGGCTGACCCAGGGACACATTCAGGCTTCCTACACAGCCTCTGTACCTGGCTCACTACATCCTGTGTTCACACTACTTGTGTGTATGTGCTAAGTCACCTCAGTTGTGTCCGACTCTTTGCAGTCCTATGGACTATAGCCCACCAGGCTCCTCTGTCTATGGGATTTGCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCAGGGGATCTTCCCAGCCTAGGATCGGACCCAAGTCTCTTTACCACACTAGCTCCACCTGGTCTCACTGCCCAATCCTCCATAGCTATCCACAGTCCAGATTTTGCTGGGGGAGGTGGGGTGTCATACACTGGGAGAGCTAACTACACTGATCTCTACAGGGTGTTACAGGTTCATCACCACACCCCCAGGGGACAGAAGAGAACTCTACAAAGGAACAGATGCACCATCTTCAAAGAAAAAGGCCCTTTATGTTTTGTTAAGAGGAGTCTCATTTATGAGGTCTGCTGAGCTTTCTTTCCCAGTCCTACCTTACTGGCTCCCTTTTAATATTGTAAATAGTAAGGAAAATGTTTTCACTCTGTAACTCAACACTAATTGAGAATCCTCTCTTGTTGATTGTGGGCCTTCGGAAATGTTTAATGCTTGTTGGGTGGTTTGCAAGACAGGGACTTTTTTTTTTTTAACACCTTTATTGAGGCATGTTATCATAAAGTTTGTCTATTTCAAGTGTACAAGTCAGTGATTTTAATAACTTCCTGAGTGGAACAGACATACAATTCTGTTTTAGAACCTTTGCATCCCCCTTAATAAGATCCTTCATGTCTATTTACATGGTACCCACGGTACTTGCCTAGCTCTAGGCAACCACTAATCTATTACTATAAATTTGCCTTTTCTGGACATAATCTCAATGGAATCATACAATCTGGTCTCTTGTATCTGGCTTTCTTCATTTAGTGTATTTTTGAGGTTAATCCATGACATATAATTTATGTTACTGGTTTGTTCTTTACTGCTAAATAATATTCCATTGATGGATATACCACATTTTGTCAGCAGGGAGTCTTACTAAACTTGGATTTCAACCTCTTGGGGTCCAAATGGAACCCTGAGAACACAGGACTCATGGGGGAGCTGCTGTGCATGTCAAAGGAACTGCGTGTCAGAACCAGCTCCGTCAGCAGCAGCTCCACAAGGAGCCTGAACTGCTGCAGAAATTTTTACAATTTTGCATCTTATTTTTTGTATGAAACTTTCATGCCGTCTATGTCAGCACAGATAATTAACAGCATCTGATAATTAACAAGTTCATGAGCATGTGTTTGAGCGGAAAGAAATGAAACCATCAATACCGCGTTGGATATTTTTTTCTCCTCAGCTAGACAGAGAAATCTCTGAACTTTCTAAACAATGTTATTTCCATTACAAAGCTGAACATGTGTTACGATCACGCCGCCTTTGTTGGATCGAGTTAGAAGAGGACAGCCAGCAGAGGAGGCCAAGAGGAGAACGGGAGTGAACTCTGTGGTGCATCCCAGCGGGTCTGTGCACGGCCCACGGGTCTGCTGCTGTGGGTGGTGAAGTGCTGACGGTGCCAGGGCAGCTCAGCACCTCCAGCAGGCCCGGGCCTGGACTTTGGACCTTTTCCCCTATTTCTCAGGTGTTTAAAAGCTGTTTCTGTTCCTTCTTTTCCTATGTATACATTACATGGTAGTTGTTAGTACTTCTTTGTGGGAGGGGCAGAGCTTTAAAATTGAAGAAAATAATTTTCATAAAAATATCAAAAATGGAAAAAAGTTACTTTTTAAAAAATTTGCTATACAAAGTGGCAGCTGTTGAAAATCTCTCTCATTAAAATGAGAATAAAATGCATTTGCTGGCAGTCGTACTGTTTTTCCTTCAGTGGGGTCATTATATTAGAGGAGGATATGTGTATGTGATTTTTGTCTCAATATGAATCAGTTTTAGTCGCACAATCTTCCACTCTAAAATGTGTTACAAAGTATTCAAAGCATTGTCTTGGAAGTTAGACCTGAGTGAATCCCATCTCCATCACTTCGTGCCTCTGGCCTGAACCTG EMBV3_35752 AAGGTGACGTTCCAGCCTCTCAGCAAATACCCTGCTGTGATCAACGACATCTCCTTCTGG Gene GeneID:505390|FARS2:NM_001076805:202_cdna Constitutive 0 NULL GeneID:505390 23 GENE FARS2 MGC151783 phenylalanyl-tRNA synthetase 2, mitochondrial EMBV3_12434 GTTTTTTAAAGTCAGACCTTGGCAAGAACTAAAATAATTTGGGGTTACATGCCCTTGACT Gene GeneID:777786|LOC777786:NM_001078161:26_cdna Constitutive 1 NULL GeneID:777786 5 GENE LOC777786 MGC148371 hypothetical protein LOC777786 EMBV3_06311 TGGTGGGGCTGTTTGAAGACACGAACCTGTGCGCCATCCACGCCAAGCGCGTGACCATTA Gene GeneID:531990|LOC531990:XM_002685500:11_cdna Constitutive 0 NULL GeneID:531990 2 GENE LOC531990 NULL similar to His3:CG31613 CG31613-PA EMBV3_26416 TGCCCCAACAGGGCTACCTCTGGGAAAAGAGGGCTTTTGATTGTTTTATGCTTTCAGCCC Gene GeneID:511940|MAL2:NM_001081719:19_cdna UTR3_Alt 2 NULL GeneID:511940 14 GENE MAL2 MGC151721 mal, T-cell differentiation protein 2 EMBV3_36602 CATAGGGTAACCCATCTTTGTGTCAATGATGAGAGTGCTGGGCAGAACCAAGGACTCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32985 GTAGCATTTGTTAGGAGTTAAAAGAGAATTCTTTCTTTCATCAGAGTGAATTTATAGTGG Gene GeneID:521261|PCMTD1:NM_001081526:32_cdna Constitutive 3 NULL GeneID:521261 14 GENE PCMTD1 MGC143031 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 EMBV3_04736 TCATATTTGTGAAGCCCTGTGATACACTTTTCTCAAGTTTTTTTCTTATGTGGCGATCTC Gene GeneID:506221|METTL2B:NM_001075246:212_cdna Constitutive 0 NULL GeneID:506221 19 GENE METTL2B METTL2 METTL2A MGC142587 methyltransferase like 2B EMBV3_10201 GGATCTGAGGTTTAAGAACCGTAACTTCAGACCTCCAATGGCCGACCAGAGAATGGACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42027 TGTGTGTGGTAGTTGGGGAAGAGGAGCAACTGGCTGGAGTGATGGTCCCACTGTTTTTGA Gene BVV0102_219499 + 1 EMBV3_38378 GK000009.2:45966695-46185781 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00240466 1 XLOC_147130 NonCoding TCONS_00240466 XLOC_147130 NonCoding NonCoding - 9:46128356-46128663 - TSS180144 307 1 TCONS_00240466_1 55 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00025809345651229 0 0 0 0 0 0 0.0020021534934469 5.46078366654857e-05 0 0 0 0 0 0 0 noncoding TGTTGAGGGGAACTGGGAGGTACCTGCTTACTTTTGGCATCTTTCTGTGTGTGTGGTAGTTGGGGAAGAGGAGCAACTGGCTGGAGTGATGGCCCCACTGTTTTTGAGGCCATTTCAGACATTTTCTGGCTGGCTGCAGGTTGTGTCTTTCTTCCAAGGAAAAGTTGGTGCCATTTTGCCAGAGTTGCCCCAGCACAGTGTGTCTTGGAACCCCCACCTGCTAGCACCCAATCTAGCTCCAGCTGGCCTACTATAACCACTTGGCACATGCAGTCTACACAGGGATTGCCTCAGTACAAGGCCACAC TCONS_00235410 TCONS_00235411 TCONS_00235413 TCONS_00235414 TCONS_00235415 TCONS_00235417 TCONS_00235419 TCONS_00235420 TCONS_00235421 TCONS_00235422 TCONS_00235423 TCONS_00235424 TCONS_00235425 . 3' 272812 TCONS_00235410 TCONS_00235411 TCONS_00235413 TCONS_00235414 TCONS_00235415 TCONS_00235417 TCONS_00235419 TCONS_00235420 TCONS_00235421 TCONS_00235422 TCONS_00235423 TCONS_00235424 TCONS_00235425 . 3' 273118 EMBV3_42308 CCACCAGGTTGCTTTTATCAGTGTTAGAGGTCTGGATGGCTTGCTGCCACCTGTGAGAAG Gene BVT0102_199636 + 0 NULL GK000022.2:37556711-37587701 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128519 TCONS_00128521 TCONS_00128525 TCONS_00128516 TCONS_00128524 TCONS_00128518 TCONS_00128522 TCONS_00128517 TCONS_00128520 TCONS_00128523 1 XLOC_077906 Coding TCONS_00128525 XLOC_077906 Coding Coding ATXN7 22:37587030-37675105 = TSS95856 3596 1 TCONS_00128525_3 974 13 0.959318300520017 0.00262590935429525 0.000789702147022993 0.00260612524942919 0.00335742830392747 0.00262953379165616 0.000958471433603153 0.00212103943304298 0.00178263298095305 0.00248236797282137 0.000909932072378178 2.9321909113425e-157 0.000184655094359664 0.00079259975990656 0.000985606686679623 0.00114975076691213 0.000404261147631243 7.4541432273202e-67 0 0.00142280053603594 0.00150991150852177 0.00253091880598285 1.39340668433134e-05 0.00122937609668195 1.76238482112999e-178 0.00310394238776498 0.00327874135261358 0.00267103542817395 0.000354759600701213 0.000826689429535255 0.000214504032185216 XM_002696986.3 ATXN7 PREDICTED: Bos taurus ataxin 7 (ATXN7), transcript variant X1, 0.0 4522 99.88 0.699110122358176 XM_005265365.1 ATXN7 PREDICTED: Homo sapiens ataxin 7 (ATXN7), transcript variant X1, 0.0 3494 88.91 0.734705228031146 TCONS_00128525_3 sp|O15265|ATX7_HUMAN ATX7_HUMAN Ataxin-7; 0.0 1296 88.12 0.903490759753593 1 coding 0 0 0 0 0.0266342243041733 0.852446591488883 -0.0222678673213045 0.62854486121945 ATGTCGGAGCGGGCCGCGGATGACGTCAGGGGGGAGCCGCGCCGAGCGGCGGCGGCGGCGGGCGGAGCAGCGGCCGCGGCCGCCCGGCAGCAGCAGCAGCAGCCTCCGCAGCCCCAGCGGCAGCCGCCGCCGCCGCGGCGCCTACGGCCGGAGGACGGTGGCCCTGGCGCCGCCTCCACCTCGGCCGCCGCCGCAATGGCGACCGTCGGGGAACGCCGGCCCCTGCCGAGTCCCGAAGCGATGCTGGGACAGTCGTGGAATCTGTGGGTCGAAGCTTCCAAACTTCCTGGGAAGGACGGGACGGAATTGGACGAAAGTTTCAAGGAGTTTGGGAAAAACCGCGAAGTCATGGGGCTCTGTCATGAGGACATGCCAATATTTGGTCTCTGTCCAGCCCACGATGATTTCTACTTGGTGGTGTGTAACGACTGTAATCAGGTTGTCAAACCACAGGCATTTCAATCACATTACGAAAGAAGACATAGCTCATCCAGCAAGCCTTCTTTGGCCGTTCCTCCCACTTCAGTGTTTTCCTTCTTCCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGGAAGTGGAAGCAGCCGTTCTTCCAGCGGAGGTGTCCTGAGCACATCCTCGTTAAGTTCCAAGTTGTTGAAATCGCCCAAAGAGAAACTGCAGCTCAGGGGGAACAGGCCAATGCATCCCATTCAGCAAAATAGAGTCCCCCATGGTAGAATCATGACACCCTCTATCAAAGTGGAAAAGATTCATCCGAAGATGGATGGCACACTACTGAAATCCGCGGTGGGGCCCACCTGTCCTGCTCCTGTGAGCTCCTCAGTCAAGCCTGGCCTTAACTGCCCCTCAATACCAAAGCCAACCTTGCCTTCACCTGGACACATTCTGAATGGCAAAGGGCTTCCTGCACCGCCTGTTCTGGAAAAGAAGTCAGAAGATTACTCCAATAACAGGAAGTTTTTAAATAAGAGATTATCAGAAAGAGAGTTTGATCCTGACATCCACTGTGGGGTCATCGACCTCGACACCAAGAAGCCCTGCACCCGGTCTTTGACATGCAAGACACATTCCTTAACCCAGCGGAGGGCTGTCCAGGGTAGAAGAAAACGATTCGACGTGTTGTTAGCCGAGCACAAAAACAAAACCAGGGAAAAGGAATCGATTCGCCATCCGGACTCTCAGCAACCAGCGCAGCCTCTCAGGGACCCACATCCCACCCCTCCTAGAACGTCACAGGAGCCACACCAAAACTCTCACGGAGTGATTCCCTCCGAATCAAAGCCTTTCATAGCTAGTAAACCTAAACCTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGCCCTGCTCAGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAGTCTATGAGTCTCCACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTCGGTTATCCAGTGAGGAGGGAGAAGGCGATGACAAAGAAGAGTCTGTTGAAAAACTGGACTGTCATTATTCAGGTCATCATCCTCAGCCAGCATCTTTTTGCACATTTGGGAGCCGGCAGATTGGAAGAGGCTATTACGTGTTTGACTCCAGGTGGAACCGGCTTCGCTGCGCCCTCAACCTCATGGTGGAGAAGCATCTGAACGCGCAGCTGTGGAAGAAGATCCCGCCCGTTCCCAGTACCACATCGCCTGTGTCCACACGTGTTCCTCACCGGACAAACTCTGTGCCGACGTCACACTGTGGGGTTAGCTACCTGGCAGCAGCCACCGTGTCACCTTCCCCTGTCCCGCTCTCGTCCACCTGCGTCTCCCCCAGCAGTAAGTTGGTCCCAGCTCACGGAACCACACTGAACGCCCAGCCCGCCGCCTCCGGGGCTGTGGACCCTGTGAGCAGTATGCAGTCCAGACAAGTGTCTTCTTCCTCCTCCTCCCCCTCCACGCCCTCCGGCCTGTCCTCCGTGCCCTCCTCCCCCATGGCCCGGAAACCTCAGAAGCTGAAATCCAGCAAGTCTTTGCGGCCCAAGGATTCTTCTGGTAACAGCACGAACTGTCACAACGCCAGTAGCAGTGCCGGCGGCGGCTCAGGAAAGAAACGCAAAAACAGCTCCCCACTGTTAGTTCCCTCGTCCTCCTCCTCATCATCCTCGTCCTCTTCTTCTCATTCCATGGAGTCTTTTAGGAAAAACTGTGTGGCTCACTCTGGACCTCCCCACCCCTCAGCAGTAGCTTCTGCCCCGGGCATCAGCCTCAATTGCGTGGCCAGCCGAGCGAACTCGGTGGGTGGCCGGCACGAGCAGCCGGGGTGCCGGGGCACCTCCAGCGGGAACCCCTGCGAGTCCATCAAGAGGATGAGCGTGATGGTCAACAGCGGCGATTCCACACTCTCCCTTGGCCCCTTCGTGCACCAGGCCGGCGGCGAGCTACCCGTCAACTCCCACGGCGCCTACCCGCACTCACACACTCCTCTGGACAAACTCCTAGGAAAGAAAAGAAAGTGCTCACCCGGCTCGAGTGGTGTCAACAGCAGCGGCGGCAGCAGCAAGCCCACCAAGGTGGCCAAACTGCCGGCCGTGAACAACGTCCACGCGAAACACGTGGGCCCCAGCCCGGGGGCACCGGGGCTGACGAACAGCTCCCTCCTCCATCAGATGCTCCTGGCTAAGGAGGCCACACCAAGCGCATTTCAGCAGCTGGGGCGGTGGACACCGTCCTGCATGACGGTGGGGCCCTCCGTGTCCTGGAGCGCAGTCCTTTCGGCAGGGCTGGGGACAGCCGCTTACTTACCTTTCGATGTCTCCCCACCCCCCTCTTTTTTGAAAGCCAAAGGCCCATCCCTGACAGCTGGAAATAGCATGGGGAGGAATAATGTGGACACTTTGGACGACAAGTTACACCTCCACTCAGCACTCTGGATTCCACGACACCTTTGAGTCTGTTTTCCCAGCCTCCTGTGGGCCTCGAGGGTAGAAATCTGCCGGGCCGTTGTTTTAATGAGGATGCCCCTGAAGCTTTGTCTGTAGCAGTGAGTACTCGTTACAGGACACTGGATCAAGTCCAGCCACCAGGTTGCTTTTATCAGTGTTAGAGGTCTGGACGGCTTGCTGCCACCTGTGAGAAGTTCCTGTCTCGTTGTTGCACCTGCAGTGTATCACCGAGCCGCTCTTGGAGGAGGCTGGCTGGCGCCAGTGTCTCGGCAAGAGTGTGACTGTAGTCTTTGCTCCCTCTCTCCCTCCCTCACTCTCCCTGCCTAGGTCTTCCCTCACCCTGGCATCTGTAGGCCCCAGGTCCCTCTCCAGCAGTCAGATACCGTAACTGGAGAGACCTCTGGGGGCAAGCAGAGCTGCACCCCGAGCAGCCCTCTGGAGAAGGGAGTCTGTGGCTAGGTGTTTACATCTGGAGTCCGGAATGGAGTGTGGACGTTAGTGTGAGGCGCCGTGATAAAAGAGCCTGTGTTTTCGCCCAGCCTTTTGCAAGTAATTCGGGATCAGAAGCCGTCAGAAGTTTTTCATGTGTGAACTGGTTTAAAAGCCATTGATGGCCAGAGAGCAAGGATACACCAGTGTAGAGGCTTACTTTTCATGGTACAAAAGCAATTCTGTGT EMBV3_01325 CCCCAAGAAGAACATCAAAGCTAGGAGTGCTCCAAAGAGCACAAACCCAAAACAAGCGTG Gene GeneID:518004|SFRP4:NM_001075764:54_cdna Constitutive 0 NULL GeneID:518004 4 GENE SFRP4 MGC139918 secreted frizzled-related protein 4 EMBV3_01952 AAAGCTATGCCCGAGGATGCTAAGGGGCAGGATTGGATAGCTTTAGTCAAAGCAGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43243 CCGGGTGTATGTGTGAGGCGACAAAACCCCATCCCAGGTGGTTTCCTGTTTTCAAGTCCT Gene GeneID:514026|PVRIG:XM_002698134:507_cdna Constitutive 0 NULL GeneID:514026 25 GENE PVRIG NULL poliovirus receptor related immunoglobulin domain containing EMBV3_38751 GCTGGCCTGAGGACAACTCATACATCATGGATTTTAGAACAGAGACAGAGAAGGGACTCA Gene BVT0102_087259 + 1 EMBV3_18644 GK000010.2:73510169-73628026 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022127 1 XLOC_012798 NonCoding TCONS_00022127 XLOC_012798 NonCoding NonCoding - 10:73514900-73516083 - TSS16017 1183 2 TCONS_00022127_4 80 0.345731191885038 1 0 2.30020215656708e-05 0 9.38698999820296e-05 0 0 0 9.859190618588e-06 0 0 0 0 0 0 0 0 0 0.00421021023589416 8.48383173510927e-05 0 0 0 0 0 2.83425785332607e-05 0.000374828149868452 0 7.92446880662042e-05 0 0 0 NM_000554.4 CRX Homo sapiens cone-rod homeobox (CRX), mRNA. 4e-07 60.8 77.17 0.0760777683854607 0 noncoding 0 0 0 0 -0.207376078586999 0.132015354762262 0.00107936748274466 0.984937162327223 GAAGTTTTCAATTTTGGCAGGAAAATGAGGTCAACTGACAAAAACAAGTGTTTCCTACCCAGGCAGGTTCTTTTGGAATATTTTTAAAGTCACTTGGATTCTCCTATTTATGAGTTTTTTTAGTCTTACTCAGACCCCCAGTGCTGTGTTTTCCAAAGAGAATGAGCAAGCATCAGAGCCCTCCTCAGATCATATTGATTTTTGTTCTGAGTCCACCTCCCTATTTTTCTTCCTAGCTAAAAGAACCCCAGTTTTGTTCTGGCATTCAGCCTGAAGGAAGGGGACCATTTTGCAATAATGTTTATCCCTTTTGCTAGATGTTTATCTTCAAGATGGCTCTTTAGGGAAAAGAAAAACCCTGTATCATGTTTGCCAGTTCCTGTGGTGTAAATATGCCCACCACGGACAGTCTCAGGCTACCAACAGGAGATCACCAAATGGAGGGTGTGGGGAGAGACGTGTGCTGTCAGCTCTTTTGAGCTGATATGAGCTGCCCTATGGCCACCCAGGGACCATGGGTCAAAGTCAATCATGGTGATGCCATCTCTCTGTAGTAATTGGCTTGTGACCAAAAAATATTCTGGGGCAGTACTGAGTGCTTTAAGAAAAGTTTTCTTTATCAATAAAGGAAGGGGTTGCTTCTCTTATTTCACTGCAGTAATTCATACTCCACTGCAGTTAGTACTGACAGGCATCTTGTGGTCGTGAAGGCAGCTGGCCTGAGGACAACTCATACATCATGGATTTTAGAACAGAGACAGAGAAGGGACTCAGGTCCTCGGTGATGTGATGAAGCTGCTGAAAGCACTGTGTTTCAGGACTTCTAGTTGTGCATTCCAAAATATTCCAGGTTGTTGAATCTCTGTGGGCTGCGATTTCTGTTACTAGCAGTAGAAAGCTTCCGAACTGATGTATCTTCTCTGCACTGATCACTCAGAATCTCGGCAGAGAAGACACACGAGTTATTACTCAGCCTGTAGCACCGCACCAGGGGTGACTGCGGAGCAGAACTTCAAGGATTCCGCAGCAGTGGAGCTCAAAGTCAGCGTCTCACAGCTCATTCTCTCTCCCCTGCACCACCATCCAAAGCCCATTTACCATGTGAAATGTCACCAACTTTCTGTCTCGCATATCTTGCTCCAGCAGCGTTAGCTCAGGTGATGTAGGACATTACTAGGGCTCC TCONS_00014690 TCONS_00014691 TCONS_00014692 TCONS_00014693 TCONS_00014694 TCONS_00014695 TCONS_00014699 TCONS_00014700 TCONS_00014701 TCONS_00014703 TCONS_00014704 TCONS_00014705 TCONS_00014706 TCONS_00014709 TCONS_00014710 . 3' 63058 TCONS_00014690 TCONS_00014691 TCONS_00014692 TCONS_00014693 TCONS_00014694 TCONS_00014695 TCONS_00014699 TCONS_00014700 TCONS_00014701 TCONS_00014703 TCONS_00014704 TCONS_00014705 TCONS_00014706 TCONS_00014709 TCONS_00014710 . 3' 64240 EMBV3_31830 ATCAGAGGTCAGAGCTCACGTAGGGGAAGGAGATGCAGGTATGATTTGAATCACAAGAGG Gene BVT0102_082193 + 1 EMBV3_27401 GK000028.2:25221187-25228152 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10969 ATCGATCAGCAAATCTTTCACAGGAATGGCACAAGGAAACCAGCATAGCAAGCTGCTCTT Gene GeneID:281530|THBS1:NM_174196:109_cdna Constitutive 0 NULL GeneID:281530 10 GENE THBS1 THBS thrombospondin 1 EMBV3_35202 CCAAACATCCCCGGGTACACAGATCAGGATGCAGATGGGTTGGAGAGCAATGTGTGTGTT Gene GeneID:534248|MGAT1:NM_001015653:40_cdna Constitutive 0 NULL GeneID:534248 7 GENE MGAT1 GNT-1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase EMBV3_26789 GGAGCACTACGACATCCTGTGTGCCATCGAGACGTCGGCCAAGGACTCAAGCAATGTGGA Gene GeneID:100336474|LOC100336474:XM_002697164:128_cdna Constitutive 0 NULL GeneID:100336474 22 GENE LOC100336474 NULL RAB11B, member RAS oncogene family-like EMBV3_00136 TGTGACACATGGGCTTAGTTGCTCTGCAACATGTGGGATCTTTCCAGGTGAGGGACAGAA Gene BVV0102_450195 - 1 EMBV3_34539 GK000019.2:40974703-40981689 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15164 GGACCAGATACTTTCCAGGAAGAATGTAAGTTTCATCTCTCGAACATCTTCAAATCAAGA Variant GeneID:510390|LOC510390:XM_002689372:20_cdna 116^181 2 EMBV3_23507 GeneID:510390 7 GENE LOC510390 NULL similar to Vacuolar ATP synthase subunit S1 precursor (V-ATPase subunit S1) (V-ATPase S1 accessory protein) (V-ATPase Ac45 subunit) (C7-1 protein) EMBV3_06920 AGAGTGCTCGCTAAAATGTTTTGGACTCTCACGCTGGCAATGTCTCTCATTCCTGTTAGG Gene GeneID:281373|P4HB:NM_174135:18_cdna Constitutive 0 NULL GeneID:281373 19 GENE P4HB PDI prolyl 4-hydroxylase, beta polypeptide EMBV3_05765 ATAGCCCTGCTGCAGTTACGTAGTCCCCGTGTACAATACATACCCATGACTGATCCCCAT Gene BVV0102_237678 - 1 EMBV3_39056 GK000007.2:39134101-39191686 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220377 1 XLOC_133694 NonCoding TCONS_00220377 XLOC_133694 NonCoding NonCoding - 7:39145527-39146117 - TSS164375 590 1 TCONS_00220377_2 78 1 0 0 0.000476874680530162 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000179061899822882 2.81394699427914e-06 0.000212634882510209 0 0 0 0.000150928818580479 3.10984382115526e-05 2.84146208514764e-05 0 0.000525425753889872 0 0 0 0 XM_005202962.1 ARMC9 PREDICTED: Bos taurus armadillo repeat containing 9 (ARMC9), 4e-136 488 86.18 0.711864406779661 0 noncoding 0 0 0 0 -0.225898126990027 0.218593646189441 0.0833647255699397 0.211107020027576 GAGGTGAAGCACAGTTTATTATGCCAGAGGGTCCAAGGGGAATCAGTTCCCAACAAGGACCCTGATGTTTCTGAGCGGCCCAGTTTTATACCCCCCGCTATGTGACAGGTTACATGTTAGCAACCTCTCTGTTGTATATGACTGAGTTTTACAACAAGTAGGTGCCAGGAGAACAAACAATTAAGGTTAAAGGGGGGAAACAATGATTATACATCAAGGGGGCTGTCTCCTTGGTTAATCTAATGGGGGCAGCCTGAGCTCAACCACAATCTCCATTTGTCATCTGTAGAGAGGGATATCTCCAGGAGACCTGGTTTTCATTAGCAACTGTTTCCTCACTATTGGGCAAAGTTCATGCCCATTTCACATCTTGTCTTTAGGATGGATGACAGGCTTCAAGATGGAGTCTCTCTTGCTTCTCCCACACTGGCCCCAACATTCCCCCCTCCTGATGCTCATCTTATCTTTAATGATGGGGATCAGTCATGGGTATGTATTGTACACGGGGACTACGTAACTGCAGCAGGGCTATCAGTCTGGAGGTTACACATTGAGTTATACACTGGAGAATACAAGGCCCCCAAATTAAC TCONS_00216535 TCONS_00216536 . 5' 11366 TCONS_00216535 TCONS_00216536 . 5' 11366 EMBV3_21794 CATGGAGAACCAAACCCATAATACATTGGGTTTTCCAAACTAACTAACAGCTTTGAAAAA Variant GeneID:537776|LOC537776:XM_002698993:27_cdna 131^398 2 EMBV3_37374 GeneID:537776 29 GENE LOC537776 NULL hypothetical LOC537776 EMBV3_33544 TGGGCCCCCAAAGGATACTACACCCTAAGCAACAACCTGGTAACCCTCGAAAACGGGAAA Gene GeneID:282387|CD40LG:NM_174624:11_cdna Constitutive 0 NULL GeneID:282387 X GENE CD40LG TNFSF5 CD40 ligand EMBV3_42123 GTACCACTTGCCTCCTTCCCACTGTCTACCAGGGGCTCCAGAGTTGAGCTTGAACTTTTT Gene GeneID:525256|PREB:NM_001076875:147_cdna Constitutive 1 NULL GeneID:525256 11 GENE PREB MGC142362 prolactin regulatory element binding EMBV3_05439 AGTCTTTGGTTACAACTTTGCTCTTACTCAACATCGGCGAATGCATGCTGGAGAGCGACC Gene GeneID:785286|LOC785286:XM_002707875:13_cdna Constitutive 0 NULL GeneID:785286 18 GENE LOC785286 NULL similar to Zfp273 protein EMBV3_00868 GCCCTCCCCCCGGGCCCGCCCCAGTTGAAGATATTTTCCAAGTATGGCAAAGTTGTAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15728 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27543 TAGTTCAGGTGCTGACATCTAGGAAGAGTCAGAAAACATCAAGTCACGCGTCCGTCTCGC Gene BVT0101_080884 - 1 EMBV3_41304 GK000021.2:22183355-22192639 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22313 GAGAGACATGAACCTGATGATCACACACGTAACATCCCTGCAGAATGCCAGCTTGGGAGA Gene GeneID:508731|ZMYM2:NM_001101907:31_cdna UTR3_Alt 2 NULL GeneID:508731 12 GENE ZMYM2 MGC165807 zinc finger, MYM-type 2 EMBV3_00403 AGTCGCAAAGAGTCAGACACGACTGAGTGACTGAACTGAATGGTCTAGTGGTTTTCCCTA Gene GeneID:520684|ZNF33B:NM_001075810:11_cdna UTR3_Alt 1 NULL GeneID:520684 28 GENE ZNF33B NULL zinc finger protein 33B EMBV3_15395 GCTCTGCAGATATTAAACCCTTTCACCATCTACAGTCACGGAAATGCTCTTTTAAGGCAG Gene BVV0102_129615 + 0 NULL GK000019.2:11107335-11112587 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40382 GAGACGGCCGTGCTGACAGATCCGCTTCAGGGTGTTGTCATACAGCAGAAGATGAACAGA Variant GeneID:512684|ZNF547:NM_001105360:37_cdna 235^400 1 EMBV3_00881 GeneID:512684 18 GENE ZNF547 MGC151585 ZNF551 zinc finger protein 547 EMBV3_27079 ACTGAGTCATGCAGGTTGTGGAATCTTAGTTTCTTGACCAGGGATTGAACCCGGGACCTC Gene BVT0102_165899 + 0 NULL GK000011.2:20133741-20389865 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024308 TCONS_00024309 TCONS_00024310 TCONS_00024311 TCONS_00024307 1 XLOC_014475 Coding TCONS_00024307 XLOC_014475 NonCoding Coding - 11:20255182-20258839 - TSS17867 869 0.289988492520138 3 0.763129102844639 0.00194170349826997 0.000149002962888723 0.00050336830279967 0.000275568828302055 7.43964141683004e-05 3.50852472281644e-05 0.000579277465074195 0.000160683680607577 4.1787319471508e-05 0 0 0 0 9.31973813440425e-31 0 0 0 0 0.00226522663765998 0.00105414374219036 1.61657095593408e-05 0 0 0 4.77228370313105e-05 0.000123459249692853 0.000108981132265396 0 0 0 NM_001035485.2 CCDC8 Bos taurus coiled-coil domain containing 8 (CCDC8), mRNA. 3e-20 104 84.38 0.107019562715765 0 noncoding 0 0 0 0 -0.0563544589925838 0.619885414912305 0.0548102231767357 0.264964218751243 GTTTGGGTATGGCAGGGGAGAGGGGATATTGAGTCCCAGAAGCTCCCAATTCAGAGCTAAACACCACCTTCTTAAGGATGCCAGCCTGCTGACCCACCATCCTGAGTAGCTCCGTCAGTGAACTCCCAGCAGCCCCCAGAGATGCGGTTGCCGGGAGAAGTGTAGGAAATGCCAGTGTGGCAAATATCATCTCTGGAAAAGGCTGGAATCACGGACTAAGTCAGAAGCCGAAGGTACTCCACTCAGGAGGGGGAGAGAAGGGCAGGCTCCCCACTTTCTGGAGAATGCAGAGGCGACATCTGGCAGAGACCTGAGAGGTGCGGCACTGGGTGGCTGGAGGCAAGCGCTGTCCTAGAGCTCTAGCTTCCTTCCTCCAAGAGCTTGGCCAGAGGATGTGCACACTTGTTCCTGAGTACAGTCAGTATCTCAGTGGTCACCAGGGTACCTTGTGAGAAGGAGCTGTGTAGATTTGGAGTTTACTCACAAGATCTACTTCTCTATGGCTATGAGTATGAGAGACTTCTTTATTTAAGATCTGGTTTTCGCTTAACCAGCTCTTTCACTTAACTAGCTACGTTGTCTCAAGATTCTTATTGTCTCTATGCCTCAATTTAATCACTTATAAATAAGAACAAGGGAATTTCCTGGTGGTCCAGTGGTTAGGACTCTGCACTCTCTCCACTGAGGTCCCGGGTTCAATCCCTGGTCAAGAAACTAAGATTCCACAACCTGCATGACTCAGTTTAAAAAAAAAAAATGAGAACATTATTACCGACCTCATAGAGTTTCTGGGAAGATGAAATGAAGTCATGTCACCAATAACATTTGAAGCAAATATCTTTTGAATGAATAAATGACTAAAGCAATAA TCONS_00027128 r 5' 120770 TCONS_00027128 r 5' 120770 EMBV3_23997 AGGCGGTACTCGTGTGGCGGAAGGGAAACTGCATTAAAAAGAGAACGAAAGCTTCGCGGA Gene GeneID:539430|OSR1:NM_001076916:195_cdna UTR3_Alt 2 NULL GeneID:539430 11 GENE OSR1 MGC142539 odd-skipped related 1 EMBV3_03450 AGGCTGTGATCAAGAATGCTGATATGACAGAGGAGATGCAACGGGACTCAGTGGAGTGTG Gene GeneID:782505|LOC782505:XM_002707814:49_cdna Constitutive 0 NULL GeneID:782505 4 GENE LOC782505 NULL similar to dynein light chain 1 EMBV3_05909 TCTCCATTTCACTGTCAACTGCATCGCACAGCCCCTGGTGAATGTATGTTTCCGCATAGC Gene GeneID:532616|EPB41L3:XM_002697741:236_cdna UTR3_Alt 2 NULL GeneID:532616 24 GENE EPB41L3 NULL erythrocyte membrane protein band 4.1-like 3 EMBV3_40799 TCCCTAGAAAGAATTTTGAAGTGAGACCTGGGACACAGTGCTGGATAACTGGATGGGGCC Gene GeneID:788394|LOC788394:XM_002697113:28_cdna Constitutive 0 NULL GeneID:788394 22 GENE LOC788394 NULL similar to testis specific serine protease 4 EMBV3_23692 GCACGGAGAAGTTCAGGACCAGCAGAGACCGGAAGGGACCCCTTGTGGGTGACCAGGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18112 TTTGCTCCCAGTTTCCTGGCTACCGAGGTTTTCAGTACGTGCTGGAGTGTGACCACCACT Gene GeneID:282204|CRYBA4:NM_174525:11_cdna Constitutive 0 NULL GeneID:282204 17 GENE CRYBA4 NULL crystallin, beta A4 EMBV3_12983 ACATGTGCATGGTGTTCGTAGCCTTTGCTACCTGGGCTGTGAGAACATCAGACCTGCATG Gene GeneID:520080|C16H1orf170:NM_001098048:145_cdna UTR3_Alt 2 NULL GeneID:520080 16 GENE C16H1orf170 C1orf170 MGC155319 chromosome 1 open reading frame 170 ortholog EMBV3_18493 CACTTGGTGGTGGAGAGGGTGGTGTTGAATAATAGTAACACTCCAGTCCCAGAGTAAATA Gene BVV0101_029762 + 0 NULL GK000004.2:59920827-59970935 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184149 TCONS_00184150 1 XLOC_111286 Coding TCONS_00184150 XLOC_111286 Coding Coding DNAJB9 4:59963733-59975606 j TSS137197 9075 2 TCONS_00184150_1 223 0.454545454545455 3 0.235849056603774 7.46461304729011e-06 0 0 1.27816060938353e-12 3.20004432702222e-13 1.37598014428775e-07 1.22650223642102e-10 8.5006040453971e-13 8.95754955042549e-09 9.64499218915393e-05 2.72416840563678e-05 4.2882781924052e-05 1.15180576145928e-05 4.70433503732512e-05 7.4921838586494e-05 0.00121578129760957 0.00065395338626687 0.0010600066675602 1.52637691036028e-10 3.95492375769976e-05 6.78893610873876e-16 0.000277053709259911 0.00029579399364544 0.000756459375136895 0 4.00997825539829e-06 0 7.1110402912326e-05 0.000152025824491795 0.00013754091570639 XM_005205458.1 DNAJB9 PREDICTED: Bos taurus DnaJ (Hsp40) homolog, subfamily B, member 9 (DNAJB9), transcript variant X1, mRNA. 0.0 4001 100.00 0.244297520661157 NM_012328.2 DNAJB9 Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 9 (DNAJB9), 0.0 1929 83.99 0.19702479338843 TCONS_00184150_1 sp|Q9QYI6|DNJB9_MOUSE DNJB9_MOUSE DnaJ homolog subfamily B member 9; 4e-157 439 94.62 0.995515695067265 1 coding 0 0 0 0 -0.0587547063739225 0.713958455866752 0.0445638398113834 0.379364266696143 CAGTGGGGAGCGGGCTGTGCGGGAAGGCGGTTGCGAGAGGCGTGTGAGGTCGGCGGACAGGAGGCAGTGGGCCCGTATCGGCTCACGGAAGCTGCTGAGGCCGGGGTGAAGGCCGAGCCGAGCGGCCGTGTGGAGTCGCTGGATATTAGAAATGGCTACTCCCCAATCAGTTTTCATCTTTGCAATCTGCATTTTAATGATAACTGAATTAATTTTGGCTTCCAAAAGTTACTATGATATCTTAGGTGTGCCAAAGTCGGCCTCGGAGCGCCAAGTCAAGAAGGCCTTTCACAAGTTGGCCATGAAATACCATCCTGATAAAAATAAGAGCCCTGATGCTGAAGCAAAATTCAGAGAGATTGCAGAAGCATATGAAACTCTCTCAGATGCTAATAGGCGGAAAGAATATGATACACTTGGACATAATGCTTTTACTAATGGTAAAGGACAAAGAGCTAGTGGAAGTCCTTTTGAGCACTCATTTAACTTCAATTTTGATGACTTATTTAAGGACTTTGATTTTTTTGGTCAAAACCAAAATACTCGGTCCAAGAAGCATTTTGAAAATCACTTCCAGACACGCCAGGATGGTTCCAGTAGACAAAGGCACCATTTCCAGGAGTTTTCTTTTGGAGGTGGTTTGTTTGATGACATGTTTGAAGATATGGAGAAAATGTTTTCTTTTAGTGGTTTTGACACCACCAACAATGGACATACAGTACAGACTGAAAATAGATTCCATGGATCTAGCAAGCACTGTAGGACTGTCACTCAGCGAAGAGGAAATATGGTTACTACATACACTGACTGTTCAGGACAGTAGTTGGTTCTTTTTCTGTTCTCATTAAACCCAATTAGGTGACTCCTCTTCAATATCTTTGATGCAGAAAGAATTTTTTTGTGAACTATTTTGACAAGTGCATGATTTCACTTAACTTAATATAGCTGTTAAATATATTTAAATTGTTTTTGACAATTCAACATCTAATTAGGAGACCAATAGCTAATTAATTTCCCTGATTAGACAAGGTTCTTTAAAAAAAAGATACTATAATTCTGCCTGGTCTTTTTTTCTCTACTTGTCCTTGGGCTTATTAACATGACCAATTTAAGGAAAGAATTGACTTTGCCTGATAAATATTTAAAGGTTAAACTTTAAAAGTTATTCTAGATTTAAATTATGTGAACATGAATGATTTTTTTTGAGTGAAACCTTTGCTAATTTAAAATTGCATGCTCTGTAGCATCTCTGACTTAGGTTGCAAAATGTATGTGAAACTGTATAATTCAGTTCAGCAAAGGATGGCAAGCAGTATCTTGTTTAATTTCCACTGAAAGCTTGAGAAAAGTATGGTTTAATATTTACCACAGAACCATGCAGAAGAATTGGAGTAAAGGAAATGATTGTGTTGCTCATAGTTTTTAAGACCAAAAGAAAGTTGAAAACTTAAATATTGTCAAGAGATTGTTACCTGTTTGATCCCTGGCTAATGATTTTGTAGTGTTAAAGTCATAGCTGTTTTACACATCTTTTCACATTTCTTAATTAGTTGTTGGCCCTCTAGGTCTTAGTGTGAATTTATGTATTTTTGTGTGTGTGTGGTTTTTCTTCTTTGCACTCATCTTTAGAGATTGACTAATACCTCATTCTGTTTATAAAAACAGCCAGTAATTTCTGTGCAACCTTATTATGTGCAATATTTTTAAATCCTAAGAAATGTGTGCTTTTGTTTTCAGATGGACTTATTTCTTTAGTTCTGCACTTGTTCCATGTTGTACTCCATATGAGTACTAATCCTATGGATACATATTAAAACTAGTAAATATCTCATACAGCTTTGTGAGTGAGAGAAATATAATATTTACAATATGATCTCTGTTTTCATTTTATTCTTAAAAGTCTATTCTGCAGTTCTGGAGGGTATATAAGCAATTGAGCTGCTAATACTGACCATAGACTATTCTAGAAGTTTGAAGATTTTGTTAATTATAATTTTGGTATATTTGCTTGCTAGGAGCGAGTATTCTTGCCACTGGTTCTTTCCTCTTCAGGCCTGGTTGGGAAAAAGCAGACTGCATGAACCTATATTTGTTAGTAATCATCTTTAATTTGAAATCTGTGAAGAAAATGAATGTATTATATTTATGTATCTTTATTAGTTCCTAAAAGTTATACATACTACTTTCATTTGATAATAAGAAAATCGCCTGCCTTGAATTTTGGTCTAAAAATTCTCTGTGGCCTATTAAACAGAAAAAGTAAGGCAAAAAAATAAGCAAAAAAAAAATTTCAAATCACAAACATGAAGGATTATTTTATCTAGTTTTAAACATTCATTTGACTGCCCCCCCCCCGCCCCCCCTTTTTTAAACCTCCCATTTTGCTCTTTGGCATCCTTTTTGCAAGGGAAAATGTACCATGAGTCATACACACTTAGGATACAAGCTAAATATAAAGAAAGATGCTTAGATAATCTAGGTATATGTGTGAGTAATTAGCTGTGTAAGCAACTAGAAATTAGACCAGTAATCAGTATAACAATTTCCTCCGTAATTTAGAATTTTTTTTCTTTATAGTTTGTATAGGTTGAATGTACAAAGAGAATGGTGAACTCCTGTAGTTATGCAATGACCAATATGATAGCTTAATCTGTACTCCCTATATAAGTCAACACAAAATCTGTCACCTTTTTTTCTTCTATATAAAATAGTAACATAACATGACTTTATGTTTTTCTGGAGCTAACTTGTGTAATTCTTCAAGTTTTGGGTACTGTAGTGCATGTGGTAAATTTGAAGTTCTTTTGGTGCTGTAGATTGGTAGGCAGTTTTGTGCTCTAAATTTCAGATCCAATTCTGAGATCAGTTCCATGAAAATTTAGGTTGCCTAGTGGCTCAGAGGTTAAAGCATCTGCCTCCAATGCGGGAGACCCGGGTTCGACCCTGGGTCAGGAAGATCCCCTGGAGAAGGAAATGGTAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACGGAGAGGCCTGGTAGGCTACAGTCCACGGGGTCGCAAAGAGTTGGACACGACTGGGCAACTTCACTTCACTTCACTTCACTTCAAGGTCAGTTAAGAATTTATGCATTCATGAAGTAGTTATTTTAATTTTTCTAAATAAAACCACACTAGGGGAAATGGTGCAGTGGCACCCTACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTAGTGGGCTGCAGTCCATGGGGTTGCGAAGAGTCGGACACAACTGAGCGACTTCACTTTCACTTTTCCCTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTGTATAGGGTCGCACAGAGTTGGACACGGCTGAAGCGACTTAGCAGCAGCAGCAGGGGAAAATGAGACCACTGTTGAACAGAATACAGAAATTTATATCAGGAATAGGTCTCTAAAATTTATATTGTTCATGTTAATGCTGGCACCTTCAGTTCCGTGTGACATACTGAATAGTCAGTCATGGTGGTTTCCCGCCTAGTTCCAATGACAGAATACGATGAAGCCATGGTTCAGTTGCTCAGTCGTGTCCGACTCTGCGACACCATGACTGCAGCATGCCAGGCTTCTGTGTCCATCACCAACTCCCAGAGCTTGCTCAAACTCACGTCCCTCGAGTTGTTGATGCCATCCAACTGTCTCATCCTCTGTCGTCCCTTTCTTCTGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAGTTCTTTGCATCAGGTGGCCAAAGTACTGGAGTTTCAGCATCCGTCCTTCCAATGAATATTAAGGACTGATTTAATTTAGGATGGACTGGTTGGATCTCCTTGTGGTCCAAGGGACTCTCAAAGAGTCTTTTCCAACACCACAGTTCAAAATTATCAATTCTTCTCTGCTCAGCTTTCTTTATAGTCCAACTCTCACATCCATACATGACTACTGGAAAAACCAAGCTTTAACTAGACGGACCTTTATTGGCAAAATAATGTCTCTGCTTTTCAATATGCTGTCTATGTTGGTTATAGCTTTTCTTCCAAAGAGTGTCTTTTAATTTCAAGGCTGCAGTCACCATCTGCAGTGATTTTAGAGCTCCCCAAAATAGTCTCTTGTTTCCATTGTTTCCCCATGTATTTGCATGAAGTGATGGGACCAGATGCCATGAACTTAGTTTTCTGAATGTTGAGTTGTAAGCCAACTTTTTCACTCTCTTTCATTTTCATCTTGAGTTCTTTGCTTTCTGCTGTAAGAGTGGTGTATCTGCATATCTGAGGTTACTGATATTTCTCCCAGCAATCTTTATTCCAGCTTGTGTTTCATCCAGCCTGGCATTTCGCATGATGTACTCTATAAATAAGGTAAATAAGCAGGTAACAATATACAGCCTTTCCCGATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTACTTCTTGACCTGCATACAGATTTCTCAGGAGGCATGTAAGGTGGTCTGGCTTTCCCATCTCATTCAGAATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCAGAAGTAAGTATTTTCTGGAACTCTCTTGCTTTTTCAATGATCCAACTGATGTTGACAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAATCCAGCTTGAATATCAAAGTTCACGGTTCACGTACTGTTGAATCCTGACTTGGAGAATTTTGAGCATTAGTTTGCTAGCGTGTGAGATGAGTGCATAGTTAAGATGTTGGAGTGCAGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTGGGATGAAAACTGACCTTTTCCCGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCATCTTTTAGGATTTGAAATAGCACAATTGGAATTCTATCACCTCCACTAGCTTTGTTCATAGTGATGCTTCCTAAGGCCCACTTGACTTTGCATTTCAGGATGTCTGGTTCTAGGTGAGTGATCACACCATCGTGGTTATCTGGGTCATGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACTGTTTCTGTCCTTTATTGAGCCCATCTTTGCATGAAATGTTCCCTTGGTATCTCTAATTTTCTTGAAGAGATCTCTAGCCTTTCTCAATTTATTGTTTTCCTCTATTTCTTTGCATTGATCACTGAGGAAGGCTTTTGTATCTCTCCTTGCTCTTCTTTGGAACTCTGCTCAAATGGGTATATCTTTTCATTTTCTCCTTTGCCTTTAGTTTCCCTTCTTTTCTCAGCTATTTATAAGGACTCCTCAGAGAACCATTTTGCCTTATGCATTTTTTTTCTTGAGGATGGTCACTGCCTCCTGTACAATGTCACAAACCTCAGTCCATAGTTCTTCAGGCACTCTCTCTATCAGATCTAATCTAAACGAAGCCATGAACATGCTTATAACATAAAATAACATCCAGGAGTTTTGAGGCATGATATAAAAGGGTATAAAGCAAAGAGCTTGAATTGAGAGGTAAATCTGAGAACCATAGTTAAGATGTTGGAGAAGCTTTTACGTCTCAGATTTTTAGTGAAGAAATGGGCCAGAGCTCAATTATGTTAATTCATTGAAGAACTTCATTGGGAACTCTTGCCCTTTTGCTTTCAGGTAAACTGTTGACAGCTTTTTCTTAAGGTCAGAGACTCAGTGTAACTCTTCAAAGAAAAAGATTATTTCTGGGCAGGCTCCCCAATTGTGGGCATTGAGATGACATGATAGATTGAGCAGAGGTGAATTTTCACTTGGTGGTGGAGAGGGTGGTGTTGAATAATAGTAACACTCCAGTCCCAGAGTAAATAAAACCATATTTTGACATGTAGGGAGCAATAATTTCTGCATCCTGATTACATACTTACCTGCAGTTGCTTGCAGGTTGAAATACCCTGACAACTTACAAGAAACCATAGCTCCTATTGAAAAAGGAGCTCTAATGCAGGCATACGTTACTGTTGAAGAAACTGTTTTTCTCATCTATGCAAATTGAATTCCTTCATAAACACATACATATGCTCAAGGAATTCAGACATTTAAGGAAAACCAACAGTAGGGAATAGAAGCCTGGACATCAAACCCCGTATTTACTGGTTGACTATGTAGGTCTCATTGAGAAGGTGAATATACAGACTTGAGTTATATGTATGAAAGATGGAAATGTGTAACAAGTCCTAGGAAAAGTGAAGAAGCCGATATAGCTGGAGGTCACTGATAAGGCGGAATAGTTGGAGATGAGTCTATAAAGATAGTGAGGTAGGTGGGCAGGACAGATCCTGTAGGGCTTTGTCAGCTTTTGTAAAGATTTGACAATGGAATGTGATAGCTGAGTTTTGAGCAAATAGATGACTCACTTTCATAGACTTTAGAAGGATCATACAGGCTGCTGTGTTGCTAGTAGACTGTAGAGGGGCAGTGGTGGGCTAGAGAGATCAGTTAGACTACCTTCATATTCCCGGATGAGAGATTAATGCAGCTCACACTGCACCAGTGGGAATGGTTGCCAGTAGTTGCCAGGATTATTTGCTTAACAATTGGATGTAGGCGTGAAAGAGGATAAAAAGATTATTCCAAGCTTAGTGTTTAGAGAACCAGAAGGACAGTTGTTGTTAACTTAAGATGGGGAAAGCTGCAAGAAGACATTTAAGGGGAAAGATGGGAAGTTCAGTTGGACATACAATTTTGAAATAATGTATACACAGGGTTAGAGATAGGCCTGGAATTTGGAGAGAGCCGAGCTGAAGATGTGTATTTCTGAATTGTCAAAATATAGGGAATATTTTAAACCACGAGTCTAAATCACCAAGGGAATATTTATAGATATAAAAAGAAACAATCCAAGAACTAAGCCCTCAAGTGCTCTAAAATTAAAGGCAAAAGAGCCCCTCCCCTCCCCCCAAAAGAAACATGAGGAGAAAATGAGGAATACACAACGATATCTCAGAAGAGGCAGCCAGTGTGTTAGGAGTTTTGTGTCTTGGGAGAAAGTGAAAAAAAGTTTATCAAGAAGTAGAAAGTGGGGCTTCCCTAGTAGCTCAGAGGTGAAGAATCTGTCTGCCAATGCAGGAGACACAGGTTTGATCCCTGATCTAGGAAGATCCTGCATGCCACAGAGCAACAAAGCCCATGTGCCACAACTATTGAGCCTGTGCTCTAGAGCCTGAGAGTCACATGCCAGTTTCAGTAGTTGCAGTGCCCAGGCTCTAGGGCACACAGTCTCAGTAGTGGCTTGAGGGCCCTAAAGCTCATGGGCTCCAGGAGTTGTGGCACTCGGGCTTAGTTGTTCCATATCGAATCCATGTCCCCTGCATCGGCAAGTGGATTCTTAACCACTGGACTACCAGGGAAGCCCCACCATTAGAGATTTTTAAAGAAGACTGGGCTTTTCTCTTTGTACCCTGAACTGACAGCTGAATTTTTCAGTTAGGAATCAACCTCATCTTAAATGTTACAGAATCTTGGCATTGGTAGGTTTAATGTTTGTGGTTTCAACTATTTGGGACAGACTCCAAATTTCTATAATATAAGAATTTGTGATTTTTTGAGGTATAAAATGGAATTCCATGCCATATTAGTGTATTACTAGGTAGTAAGTAGACCTAGCCACCTATCCAATATCTACAAATCAAAGTATCTTTGAGTACCTCGTATTTATCATTGTGTAGGCATTTAAAGAAGGAAATCATATGCTAATGGTGTTGACTAAATTAGAGATATAAGTCTCTTTCTTCAAAGTTGAGGCTATTGTATTCTTTTTCATGTGAAGATTGGTTGCTACCATGATCCATTTACCGGATCAAATCTTTTGGTTTGATCCACTGCTTTCTATTCTGCCCCATTCTGCCACTGTCAAACCTCAATTTCCCTCATTTATTTGAATACCTGTTTTGAATTTTAACTACTGGCCTGGAGGGAGTCAAATCTACACCTGTTTTCAAATCTACATTGTTTTCACCTTCCCTCCACCAATCTATGCTGCTGACATCTCAAAGATGCTTCATGGTAGTCTTTTTTGGGTTATGACACATTATATAATTATCACTCACTAAATTAGCAGCTTAAAATAAAAAACTTTGCACTATTTAATTTTTTAAGCTTAATTTATTATTATTCAAATATAATTTCAAGTAATAATGATCACTTGAAAAATTACATGAGTGATTACACATATTAGGGAAAAGTCATTAAAATCATTCGCTGGTATTTTACAGTTTATTTTTAGTGACAATGAAATGTATTAACATGTTGGTATTATTAAAAGAGCAATAACATTTTCTTGTTTTAAATGAATTTTACTATTTTCTACATTATGTTTCATAATTAGAAATGGAATGAGTTGATGTTTTCTAATGCATAATTATTTGGTTATTTGTATTCATTCTTATTTAGATAATACTGATTCTCATTCCCTGACACACATCAGGAATATAGACCCACATACATTAGAGATATAAGATACAGAGAAAAACATTTTCTTTCCTTTTCAGAGAGCGTTTTTGTTCCTTCACTCCGTTTCCTTCCCTGTTGTAGGTAGAGGTGCTATGTTAGTTGGAATAGGCTAATCTACTCTGTAATAATGTATCAGTCACATTCATATTCTTAAATATTGGAATAATATCAAAATAAATATGCCTAATGACTGTATTACTTAATGCTATATTTAAAAAAAAGAATAGCTGTAAACTGTGTTATTTGTGTGTTCAATGAAAATAAGTATGGGAAACACTAGTTTTCTTTATTCCCCTGAAGTGAAAGTGAAGTCGCTCAGCCATGTCCGACTCTTTGCGCCCTGTGGACTGGAGGAGGACTTTGTGCCCTGGAGGAGCCCACCAGGCTCCTCCATCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGG EMBV3_03688 TCCCTGGTCAGTAATAGATCAGCAAGCAATTCATCCAGAGCTCAATGGTGCCACATACAG Gene GeneID:281730|CTBP2:NM_175712:9_cdna UTR3_Alt 2 NULL GeneID:281730 26 GENE CTBP2 NULL C-terminal binding protein 2 EMBV3_04865 AGACGGGTCTTTAGGTGGAGTCATAGACTTGTTTCCCTCTGTCTGCTCCTCTAATTAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36452 GGTGCCCATTTTCATCCCCATCTTGGTGACTCTCTTATCCGTGTTTTTGGTTTTGGCCCC Gene GeneID:508174|SLC7A9:NM_001035054:565_cdna Constitutive 0 NULL GeneID:508174 18 GENE SLC7A9 MGC126952 solute carrier family 7 (cationic amino acid transporter, y+ system), member 9 EMBV3_36611 ATGCGCATGGTCCCCATGGAGATGTTCAACTACTGTTCCCAGCTGGAGGATCAGAATAGC Gene GeneID:100297677|LOC100297677:XM_002687911:73_cdna Constitutive 0 NULL GeneID:100297677 5 GENE LOC100297677 NULL similar to leucine-rich repeats and transmembrane domains 1 EMBV3_26504 AGGGAAGGAAGACCCCTGGAACTCCATCACGGTCGGGTCGGCTGCCGTGGGTGGCGTTCT Variant GeneID:509797|TIMM17A:XM_002694116:448_cdna 456^509 4 EMBV3_17871 GeneID:509797 16 GENE TIMM17A NULL translocase of inner mitochondrial membrane 17 homolog A (yeast) EMBV3_17178 CTGTTTGTTAGTCTCTTCAGTATCTGGTTTCCGCCCTGACTCAAAGGGCACGGTGGAGGA Gene BVV0101_009349 - 1 EMBV3_19509 GK000002.2:44973220-45516361 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071418 TCONS_00115686 TCONS_00130084 TCONS_00039226 TCONS_00129783 TCONS_00178325 TCONS_00233372 TCONS_00064812 TCONS_00079609 TCONS_00116100 TCONS_00080603 TCONS_00078719 TCONS_00020157 TCONS_00063486 TCONS_00129573 TCONS_00063080 TCONS_00200574 TCONS_00209711 TCONS_00175855 TCONS_00218945 TCONS_00252107 TCONS_00021595 TCONS_00008224 TCONS_00135686 TCONS_00115865 TCONS_00056146 TCONS_00161097 TCONS_00089437 TCONS_00208264 TCONS_00010053 TCONS_00107179 TCONS_00170823 TCONS_00116665 TCONS_00238307 TCONS_00239419 TCONS_00090421 TCONS_00131137 TCONS_00021878 TCONS_00122313 TCONS_00238933 TCONS_00251907 TCONS_00063181 TCONS_00199037 TCONS_00111497 TCONS_00122282 TCONS_00079498 TCONS_00209636 TCONS_00251929 48 XLOC_043189 XLOC_069855 XLOC_078795 XLOC_023044 XLOC_078496 XLOC_108098 XLOC_142854 XLOC_039536 XLOC_048494 XLOC_070269 XLOC_049487 XLOC_047607 XLOC_010835 XLOC_038213 XLOC_078286 XLOC_037807 XLOC_122226 XLOC_128222 XLOC_105634 XLOC_132264 XLOC_155048 XLOC_012268 XLOC_003782 XLOC_081909 XLOC_070034 XLOC_033949 XLOC_097989 XLOC_054222 XLOC_126777 XLOC_005605 XLOC_063090 XLOC_103665 XLOC_070831 XLOC_144974 XLOC_146085 XLOC_055202 XLOC_079842 XLOC_012551 XLOC_073868 XLOC_145599 XLOC_154848 XLOC_037908 XLOC_120690 XLOC_067397 XLOC_073837 XLOC_048383 XLOC_128147 XLOC_154870 NonCoding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_38329 TGTGCGCCCCTGCGCCCTGCGCCCGGGCAGATGCTGTACCCAAAAATGTTAATACACTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35179 GTATGTTAGACAGCAAGAAATGAATACTTTGAGAAATGAGATATGATGGAGTTTTTGGAG Gene GeneID:407190|CSNK1G3:NM_001105329:5_cdna Constitutive 2 NULL GeneID:407190 7 GENE CSNK1G3 MGC127453 casein kinase 1, gamma 3 EMBV3_39236 GAGAATAGAGAAGAAGTAGAGGAAAAGGACCTTCATTATTTATTTTTCATGTTTCCTGAC Gene GeneID:515467|ALS2CR4:NM_001046200:110_cdna Constitutive 2 NULL GeneID:515467 2 GENE ALS2CR4 MGC137548 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 EMBV3_32451 ACAAAACAACACCACCCTCGTGTGGAAAACGGGCTGCTACGAGAAGGTCACACAGTGGTT Gene GeneID:540132|LOC540132:XM_002687893:92_cdna Constitutive 0 NULL GeneID:540132 5 GENE LOC540132 NULL similar to tetraspanin 9 EMBV3_09801 GGATTTTAGCACATCCCACCCTTTAAAAACTCTTCTGGAGGAGATCAAATAACTGTAACC Gene GeneID:615954|CHMP2B:NM_001035472:102_cdna UTR3_Alt 2 NULL GeneID:615954 1 GENE CHMP2B MGC128858 chromatin modifying protein 2B EMBV3_20268 AATGACCTTTTTGATTCTCGGCTTCTCCTCACCCCGCTGCATCACTGGTCCCTGCATCAA Gene BVV0102_275364 - 1 EMBV3_06541 GK000019.2:20978427-20993572 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099133 1 XLOC_059376 NonCoding TCONS_00099133 XLOC_059376 NonCoding NonCoding - 19:20986676-20987620 - TSS73509 944 1 TCONS_00099133_3 92 1 0 0 0 0 0 0 0 0 0 0 0 0.000152774030687213 3.78779394011112e-06 0 0 0.00152279297036789 0 0 0 0 7.61804518668689e-06 0 0 0 0 0 0 0 4.06999007911666e-05 0 1.91066598299744e-05 0 noncoding CCTGATGGCCTCTAGGGGCTGGGGAAGGGAGAGAGTTGGAGGGGGTCTATTTAAGAGATTTTTGGAATCTGTGCCTGCGCATCACCCGCTGCCATGAGTTATTTCAGCGCCGATGTTTGTCTCGAGCTGATTATTCCAGCCCGAGAACAGGTGGAGCAGCCTGCGGTGGCTTATTCGTCAGCCAAGGCCATCTGTTCCCAACAAGCTGAGATTTGTAGCTGATTTTTACTGGGGAGCAAGGAGTGGGGGCAGGGAGGGAGATGATCACCTCCGAGCCCCAGGAGACTTATCCCAGACCTTCTGCGAGGTCTGAACCCCCCAGTCCTCCCCTTCTAAAACCAATACCTGCTCGTTTTTCTCAGAGAACTCACCGGTCACTTGACTCTGAAATAGCGAAAATACTTTTTCCTTAAGGGGCTAAACCTTCTTCGATGGAGTCAGGTATGAGAAGCAGGAATCCATTAACCAGGCACAGTCTGGCCATTGAGTCATGTCCACCCTTACAGATTTTTTTTTTAATATGTAACTGTGACACAAATATCCTAAATGACCTTTTTGATTCTCGGCTTCTCCTCACCCCACTGCATCACTGGTCCCTGCATCAACACGTGTCTCCTTGTCTAAACCTGTCACCTGCAGGGCTTCAGGCAGCATGGGAGGCTATGTCTGGAGGCTCTTCTCACCCATCCCTCGCTGCGCCTCTTCCCTAAATACCCTGTTCAAGTTCCACCCTCCAATCTGTTCCTCTTCCAGCTTCCACTCGCAGCCATGCCAAGAGATGCCTGCTGCTTTAAGAATGGCTTTCCCTGAGCAAGGGAGCTAAGCGGTTTCTAAGCAGCTTTGCCACATGGTTTACCCTCCACAGCTACTATTTCTATCTATGCAGTGCTGGGAAAGACACTCCTCTTAGAGTCACACTAATATGACTAATTGGGGGCCTTCTT TCONS_00095650 TCONS_00095651 TCONS_00095652 TCONS_00095653 TCONS_00095654 TCONS_00095655 TCONS_00095656 TCONS_00095657 TCONS_00095658 TCONS_00095659 . 3' 5630 TCONS_00095650 TCONS_00095651 TCONS_00095652 TCONS_00095653 TCONS_00095654 TCONS_00095655 TCONS_00095656 TCONS_00095657 TCONS_00095658 TCONS_00095659 . 3' 6573 EMBV3_14302 TTGCCTGCTGTTTCATTGTTACGAAACCGTCTCACTTAATCCCCACAGCCGCCCAGTGAG Gene BVT0102_216739 - 0 NULL GK000010.2:9527329-9789128 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39352 CAATTCGAGGAAGCGGCGAGAATCGGCCTCCAGCTCCTCTTCTGTGAAGAAAGCCAAGAA Gene GeneID:508127|DMAP1:NM_001075346:104_cdna Constitutive 0 NULL GeneID:508127 3 GENE DMAP1 MGC139005 DNA methyltransferase 1 associated protein 1 EMBV3_28250 CCAGAGAACCGCCATCACAGGATGACTTTCCCTCAGTCTTCTGAGACCAATGCTGTGAAG Gene BVT0102_270984 - 1 EMBV3_20099 GK000027.2:14319980-14445324 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32597 GCTGAGCACTGTCATCTTGAGACCAGCCTAGCAGCCAAAGGGCCAAAACTAAGCAAACAA Gene BVT0102_110139 + 1 EMBV3_16156 GK000007.2:67338607-67406283 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09610 GCCAACAGGTGTAAGAGGAGGGGTTGACTGGATGAGGAAGTTGGCTTTTCGTTACAGAAG Gene GeneID:538786|EYA4:XM_002690259:31_cdna Constitutive 0 NULL GeneID:538786 9 GENE EYA4 NULL eyes absent homolog 4 (Drosophila) EMBV3_36393 GATGCCTCCTTAGCCGGAGCTTGGAATAGACTCACGGCCGGCGAAGTGAGTTCAATGGCT Gene GeneID:100313270|MIR685:NR_030991:8_cdna Constitutive 0 NULL GeneID:100313270 10 GENE MIR685 bta-mir-685 microRNA mir-685 EMBV3_17553 CCATCTCACTTATCCTGTCTTCTGCATCAGTTATTCTACTGGTGGTTCCCTCTAGGGTGC Gene BVT0102_064070 + 0 NULL GK000030.2:69947477-70346239 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39216 TAAAGACTTTTCTTTTAAGGCCGGCCAGTGTGCACCCTGGACTCTGAGGTGGCTGTGAGA Variant GeneID:510462|OXNAD1:NM_001035090:2_cdna 339^480 2 EMBV3_31287 GeneID:510462 1 GENE OXNAD1 MGC15763 oxidoreductase NAD-binding domain containing 1 EMBV3_02234 CGGCACACCATGTTCATGAATGTAGAACTTTCTAGAAATGCTGAAGGCAAAGCTGACTGG Gene BVV0102_228599 - 1 EMBV3_11068 GK000005.2:44116240-44127710 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194790 1 XLOC_117843 Coding TCONS_00194790 XLOC_117843 Coding Coding FRS2 5:44126999-44232760 j TSS145274 2646 1 TCONS_00194790_5 508 9 0.975066187594554 0.000321365374771353 3.3958701265866e-09 0.000138991680273113 0.000684387872956429 0.000954726936045911 6.68861396400149e-05 0.000888394772823063 0.000717545321603419 0.00105495696514195 0.000124754949134735 1.5535861403333e-05 0.000348517000717561 3.18319913420967e-16 3.35864569930367e-05 2.03232365879513e-12 0.00337990237490761 0.00103724995179821 0.00189685905847646 0.000179830595150643 0.000512423591055238 1.31210310442034e-11 0.0003383231781539 0.000715095561849129 0.00042851949530282 0.000127029629183516 0.000736489916656287 0.000205763717028677 0.000367878270852228 4.97482641836462e-05 1.37714578478746e-05 XM_581582.6 FRS2 PREDICTED: Bos taurus fibroblast growth factor receptor substrate 2 (FRS2), transcript variant 1, mRNA. 0.0 4329 100.00 0.906651549508692 NM_001278356.1 FRS2 Homo sapiens fibroblast growth factor receptor substrate 2 (FRS2), 0.0 3680 90.79 0.999622071050642 TCONS_00194790_5 sp|Q8WU20|FRS2_HUMAN FRS2_HUMAN Fibroblast growth factor receptor substrate 2; 0.0 1036 98.23 0.998031496062992 1 coding 0 0 0 0 0.0269081458287381 0.847224434955701 -0.00347512359333869 0.949990235444212 GTGCTTTTCTAGGGTTCGGGCCGTAGAGAGGCCTTGTAGGCACAGCCGCTGAGGCTTGGTCGGCTCTGAGGAGGGGCGCCTACCCGTGTGGGAGCCCGGGGTTTAGCGCCGGTCGACCCGCGCCCTGGCCCCTCTCACCTCCCGGGCAGCCGAAATGACCTTTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCAATTTGTCATAAAGATGCAGCTGTGGCTTTTCAACCAGATTAGGACAAAATTGTATCTGTTTTTCTCAGAAGAGAATTCCACAAGGTTAAGTCAGCAAACAAAGAAAACATGGTGTTTTGAAGTATGATTAAACTCCTGATGCTGCAGCAGAGGCTAAGAATATTAATGGCCAGATCTAGTGCTCACATGGTCTTCTGAAGAAGCCATGGGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTCCCAGATAACCATCGGAACAAGTTTAAGGTCATTAATGTGGATGATGATGGAAATGAGTTAGGTTCTGGCATAATGGAACTTACAGACACAGAACTGATTTTATACACTCGCAAACGTGACTCGGTAAAATGGCACTACCTCTGCCTCCGACGCTATGGTTATGATTCGAATCTCTTTTCTTTTGAAAGTGGTCGAAGGTGTCAAACTGGACAAGGAATCTTTGCCTTTAAGTGTGCTCGTGCAGAAGAATTATTTAATATGTTACAAGAGATTATGCAGAATAATAGTATAAATGTAGTGGAGGAACCCGTGGTTGAAAGGAATAACCATCAGACAGAATTGGAAGTCCCTAGGACACCTCGAACACCTACAACTCCAGGGTTTGCTGCTCAGAACTTACCCAATGGATATCCCCGATATCCCTCGTTCGGAGATGCTTCATCCCATCCTTCCAGCAGACATCCTTCCGTGGGAAGTGCCCGCCTGCCCTCAGTAGGTGAAGAATCTACGCATCCTTTGCTGGTGGCCGAGGAACAAGTACATACCTATGTCAACACTACAGGTGTGCAAGAAGAACGGAAAAACCGCACAAGTGTGCATGTCCCATTGGAGGCAAGAGTTTCTAATGCTGAAAGCAACACACCAAAAGAAGAGTCAAGTAATATTGAGGACAGGGACCCTCAGATTCTTCTTGAACCCGAAGGAGTCAAATTTGTCTTAGGACCAACACCAGTTCAAAAGCAATTAATGGAAAAAGAGAAACTGGAACAACTTGGAAGAGATCAAATCAGTGGAAGTGGTGCAAATAACACAGAATGGGACACTGGCTATGACAGTGATGAGCGAAGAGATGTGCCCTCTGTTAACAAACTGGTGTATGAAAATCTAAATGGCCTATCTCTCCCCAGTGCTTCAGGGTTCAGGAGAGGTCGTCTGCCGTCCACCAGTACCTCAGATACCCAGAATATCAACAACTCAGCTCAGAGAAGAACTGCATTGTTAAACTACGAAAATCTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGAAGATGACAACTTAGGACCAAAGACCCCATCTCTGAATGGCTACCATAATAATCTAGATCCAATGCATAACTATGTAAATACAGAGAATGTAACAGTGCCGGCGAGTGCTCACAAAATAGAGTATTCAAGGCGTCGGGACTGTACGCCGACAGTCTTTAACTTTGATATCAGACGCCCAAGTTTAGAACACAGGCAGCTCAATTACATACAGGTTGACTTGGAAGGTGGCAGTGACTCTGACAACCCTCAGACTCCAAAAACGCCTACCACTCCCCTTCCACAGACCCCTACCAGGCGCACAGAGCTGTATGCTGTGATAGACATCGAGAGAACTGCTGCTATGTCCAATTTGCAGAAAGCACTGCCGCGAGATGATGGTACATCTAGGAAAACTAGACACAATAGTACTGATCTGCCGATGTGAGCCCTGGAAAGCATTTACATTATTTGCACCTTTGTGAAGTTTTTTTTTAAAAAAATGAAGACGCAAGTGCTTCATTTTTATTTCTGAACACTAACTCCTTTTGTAGACTGATAGAAAAAATTTTTTCTGAATATTTCATGTGCTTCTTTAAAGGGAATTAATGTAGAGCAGGTACTCATAAAAGAACACTAATTTCATTATATACTACTCATTACTGTACAGCAGCATTCCCATTTTCACAGTGCCTATTTAAAATGAGAGTTGAAGTGAGTGACATGCTGGTCGATTTTTATCAAAATTCTGAACTCATGTATCATTCATGTGTAAGTCATGGTTGGCATTTAAAACAGAGCCTCTTGATAACATGCATTGCTAACAGATAACTGTAGCTTTGAAAGTACTATTTGTAGATTCACTATTCATGGTATGTGGCCTCCAGCATGTAACATCAGGAATCCTTTATTTCATTAATTGTAGGCTTTTTGACTTGAGCCAAAACATATGTAATGGAAATAGAAGTACCACACCTCCTACGTACCAGTCAGCTTTGCCTTCAGCATTTCTAGAAAGTTCTACATTCATGAACATGGTGTGCCGTTGATGTGTTGAAAGGCAAGAAAGAGATGAGATTTTCTGTTTCGTCATCTCATGATGTCATTTGAAGGGCATGCCCAAGTATCTTAATCAGAATTATAAACAGGCTCAAGAATC EMBV3_29007 GGGCTGACGTTTATGGGGTGACATAGCCGTTTTGCTATCAGCTTGTGCCCAAAGAAAATC Gene GeneID:513850|CA13:XM_002692829:180_cdna Constitutive 0 NULL GeneID:513850 14 GENE CA13 MGC179400 carbonic anhydrase XIII EMBV3_04802 TCGCTCCCACAGTGCAAAGAAGACGCCGAGATATTTAGTCTTGGATATTGCAGATAATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03620 GTAAAGGTTTTTACATCCCAGCATTTCTAGTTATTCGTTATCTCTGGGCCCAGAATGAGG Gene BVV0102_313240 + 1 EMBV3_28154 GK000002.2:35567323-35960129 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33703 GAGAAGGACATTGCGGCCCATATCAAGAAGGAGTTTGACAAGAAGTACAACCCCACCTGG Gene GeneID:783613|LOC783613:XR_084631:36_cdna Constitutive 0 NULL GeneID:783613 20 PSEUDO LOC783613 NULL similar to dynein light chain 1 EMBV3_31862 CAGATCTCGGCTCCGGTGTCGGAGCAGATGGGGGCTATCTTCACTTTGGTGTCTCTGAAA Variant GeneID:618247|LOC618247:XM_002686553:822_cdna 295^474 2 EMBV3_18991 GeneID:618247 3 GENE LOC618247 NULL similar to ZMYM6 protein EMBV3_08510 ATGATATTACTATGCAAAGCTTGCCAAAAGAGATGGGCTTCATGGGATTGTGAGCTGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21257 CCTGTTGAGAAGGACCTTGAATTTGCTGAGAACATGATTGTGGCCCTGGCCTTGACACTC Gene GeneID:616443|OPALIN:NM_001076423:237_cdna Constitutive 0 NULL GeneID:616443 26 GENE OPALIN MGC140651 TMEM10 oligodendrocytic myelin paranodal and inner loop protein EMBV3_10701 CGAATTCAGACTTGATCCATCTTTCCCAGTGTCCGAATATCAGTCAGCTAAAGGGCCTGG Gene GeneID:530538|LOC530538:XM_002694089:346_cdna Constitutive 0 NULL GeneID:530538 16 GENE LOC530538 NULL similar to PRAME family member 15 EMBV3_38982 CTTGTAGGTCACCCTGTTGCTGCCATTGAGCCTGTTCAGTTCTCAGCCATCAGTCTCCAT Gene GeneID:517933|NAA40:NM_001099004:27_cdna Constitutive 0 NULL GeneID:517933 29 GENE NAA40 MGC148821 NAT11 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) EMBV3_28010 GGAAAAAGCCAAAGCTGAACACAGAGACAAGCTGGGAGAAAGAGATGACACCATCCCACC Gene GeneID:281039|CAST:NM_001030318:2_cdna Constitutive 1 NULL GeneID:281039 7 GENE CAST NULL calpastatin EMBV3_38758 AAAGCTGCCGTGTGGGAGATCACAGGGGCTGAATTCTCGAAATCTGAGGCTCACACAGCT Gene GeneID:514719|LIG3:NM_001038107:253_cdna Constitutive 0 NULL GeneID:514719 19 GENE LIG3 MGC134139 ligase III, DNA, ATP-dependent EMBV3_23384 CCAAAGAGTGCCATCCCACCATTGTCTGGTGTGACAGTTGCTGGCAGTTGTGATTCAAAC Gene BVT0102_002554 - 1 EMBV3_42161 GK000007.2:19353053-19374777 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09850 CCTGGGCCCTGAACTGCACCCTCTATCGAGCACTACCTTTTCCAGACTGTGCTTCTCTAA Variant GeneID:100124518|ZNF420:NM_001102552:474_cdna 316^366 1 EMBV3_36969 GeneID:100124518 18 GENE ZNF420 MGC152124 Zinc finger protein 420 EMBV3_43624 GACCCTGACGGAGATGGGACCAAGATCAGCCAAAGAGCAAATCGCCTGTAAAATCTACGG Variant GeneID:782902|VSTM2A:NM_001083528:2_cdna 307^643 3 EMBV3_41197 GeneID:782902 4 GENE VSTM2A MGC142894 V-set and transmembrane domain containing 2A EMBV3_26134 ATTACAACAAGCGTTCGACCATCACATCCAGGGAGATCCAGACCGCCGTTCGCCTGCTGT Gene GeneID:616776|LOC616776:XM_002697461:83_cdna Constitutive 0 NULL GeneID:616776 23 GENE LOC616776 NULL similar to histone cluster 1, H2bd EMBV3_35131 TACGCTTAGGGTCCCAGCATGCCATCACCATCTTCTCCCTCACCACCCTTATTGTTTCCA Gene GeneID:614000|TMEM63C:XM_002691098:239_cdna Constitutive 0 NULL GeneID:614000 10 GENE TMEM63C NULL transmembrane protein 63C EMBV3_08188 ACAAGATCCACTGTGCCAAGATCCTGTCCATGTTTGGGAGCACCTACATTTGTGAACAGC Gene GeneID:539745|GTF2IRD2:NM_001083745:269_cdna Constitutive 0 NULL GeneID:539745 25 GENE GTF2IRD2 MGC139206 GTF2I repeat domain containing 2 EMBV3_11564 GGACTCCGCACCGACTCTTAACCTGAACTCAAGACTGGCTTGAGTTAGATCCAGAATCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17086 GAGAAGCCAGGCCTAAAGTGTTTGAATGCCTCTCTCTCAGTGTACAAAACAGCGAGCCCC Gene BVV0101_032404 + 0 NULL GK000016.2:4406413-4478918 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09121 TTGTTGGCACGAGAGCAGCTGGTCTGGGGCTGCTGCCCAACCACCCCCGGCGGAGAAATA Gene GeneID:510283|TRMT61A:NM_001098927:199_cdna Constitutive 0 NULL GeneID:510283 21 GENE TRMT61A GCD14 MGC165793 TRM61 tRNA methyltransferase 61 homolog A (S. cerevisiae) EMBV3_39950 GGCTGGAGAAGGGGAGTCGGGATGGGTGGAGGGAGCTTTCTGGAACACGTGCAGATTAAA Gene GeneID:539388|TMUB1:NM_001034675:703_cdna Constitutive 0 NULL GeneID:539388 4 GENE TMUB1 MGC128523 transmembrane and ubiquitin-like domain containing 1 EMBV3_39564 GGTAAGGGATATGGAGACTTAGCAGCAAACATTGGCCCAATAAGTGAAAAACCCTTCACC Gene BVV0102_217434 - 1 EMBV3_12759 GK000004.2:107204171-107215636 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023551 TCONS_00156814 TCONS_00218607 TCONS_00204180 TCONS_00011558 TCONS_00141021 TCONS_00134878 TCONS_00099337 TCONS_00138407 TCONS_00250272 TCONS_00132405 TCONS_00199292 TCONS_00138406 TCONS_00229177 TCONS_00208740 TCONS_00180616 TCONS_00122163 TCONS_00066112 TCONS_00174930 TCONS_00206558 TCONS_00025023 TCONS_00151311 TCONS_00110358 TCONS_00201274 TCONS_00022175 TCONS_00058128 TCONS_00167486 TCONS_00196907 TCONS_00220245 TCONS_00134877 TCONS_00056822 TCONS_00068428 TCONS_00048752 TCONS_00229178 TCONS_00219194 TCONS_00091564 TCONS_00229179 TCONS_00057018 TCONS_00254829 TCONS_00233406 TCONS_00206611 TCONS_00025022 TCONS_00161056 TCONS_00009827 TCONS_00120346 TCONS_00118479 TCONS_00091893 TCONS_00064874 TCONS_00109280 TCONS_00116161 TCONS_00235856 TCONS_00089192 TCONS_00098489 TCONS_00252994 TCONS_00134876 TCONS_00174931 TCONS_00218367 TCONS_00002801 TCONS_00161103 TCONS_00100335 TCONS_00202228 TCONS_00103962 56 XLOC_014218 XLOC_095274 XLOC_131927 XLOC_124364 XLOC_007109 XLOC_085449 XLOC_081568 XLOC_059580 XLOC_084615 XLOC_153215 XLOC_080770 XLOC_120945 XLOC_084614 XLOC_138675 XLOC_127252 XLOC_110383 XLOC_073718 XLOC_040830 XLOC_104738 XLOC_125080 XLOC_014641 XLOC_092080 XLOC_066262 XLOC_122922 XLOC_012846 XLOC_035925 XLOC_102322 XLOC_118572 XLOC_133562 XLOC_034625 XLOC_041687 XLOC_028883 XLOC_132513 XLOC_056338 XLOC_034820 XLOC_157761 XLOC_142888 XLOC_125133 XLOC_097948 XLOC_005380 XLOC_073143 XLOC_072637 XLOC_056664 XLOC_039598 XLOC_065185 XLOC_070330 XLOC_144309 XLOC_053977 XLOC_058734 XLOC_155935 XLOC_131688 XLOC_000688 XLOC_097995 XLOC_060578 XLOC_123873 XLOC_062257 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_04165 GCCACAGGGGATATCAAAGTGACAGACTCGGAGATTAAAAGGCGAAGTCACCTACAGCTG Gene GeneID:539919|VTCN1:XM_002686121:154_cdna Constitutive 0 NULL GeneID:539919 3 GENE VTCN1 NULL V-set domain containing T cell activation inhibitor 1 EMBV3_10944 ATTCGACAAGTCGTCCACCATCCCTCGCAACAGCAACATCGCCCAGAACTACCGCCGCCT Gene GeneID:521855|MTSS1L:XM_002694720:20_cdna Constitutive 1 NULL GeneID:521855 18 GENE MTSS1L NULL metastasis suppressor 1-like EMBV3_12055 TTCCAATCTGAATAGACAATTTTTATTTAGAATTTCATATAATTGTATGTGGACTGGACT Variant GeneID:512647|UBA3:NM_001075574:41_cdna 355^479 2 EMBV3_36726 GeneID:512647 22 GENE UBA3 MGC140052 UBE1C ubiquitin-like modifier activating enzyme 3 EMBV3_37037 ATGTCCGTCATGCTTTTCATGTACTACCAGATTTACAAAGCCGCCAGGAAGAGCGCCGCC Gene GeneID:538510|HTR7:XM_002698382:21_cdna Constitutive 0 NULL GeneID:538510 26 GENE HTR7 NULL 5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled) EMBV3_20563 TCTATTATTACACAATCACCCCCAGCTATGCAGAGTCCAGATCTGAATGACGCTGTATCC Variant GeneID:614807|C3H1orf54:NM_001076346:163_cdna 152^318 1 EMBV3_38160 GeneID:614807 3 GENE C3H1orf54 C1orf54 MGC142459 chromosome 1 open reading frame 54 ortholog EMBV3_15820 TCTGCCGTTTTTACGTCCGGATTTGGCCAGGAGGAACAACACAGCATGCTGGGCTCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21058 TGGCCTGCAGATCATGCGGAGAAGCAGGCATCAAGATTGCGAGAAGAAGCCCATAACATG Gene GeneID:532597|WAC:XM_002692128:87_cdna UTR3_Alt 3 NULL GeneID:532597 13 GENE WAC NULL WW domain containing adaptor with coiled-coil EMBV3_21013 GTCTATATACAGGTGGATTTGTTCTTGAACTCTCTATTTAGTTTTCCCCACACCATAGCC Gene BVV0102_051843 - 1 EMBV3_06880 GK000030.2:54704984-54753131 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15129 AAGATGCACTGCATTTGGCACAAACAAATGATTTTGACCGACTACAGTTTTGTTCCAAAG Variant GeneID:509365|TATDN1:NM_001075402:20_cdna 241^384 1 EMBV3_07423 GeneID:509365 14 GENE TATDN1 MGC140755 TatD DNase domain containing 1 EMBV3_11291 GCAAGCTCAACCGATGGCTAAAGTTACAAATGACATATAGTCATGGTTTCAAACTGTCCC Gene GeneID:532777|CLIC2:NM_001081727:11_cdna Constitutive 3 NULL GeneID:532777 X GENE CLIC2 MGC148419 chloride intracellular channel 2 EMBV3_02669 CGGCAACCACTGCGAGTTCTGCTTCGCCAGAGAGAAGATTGGCCCATGCACAAGCTGGAA Variant GeneID:615229|SMYD2:NM_001076364:114_cdna 190^253 1 EMBV3_36713 GeneID:615229 16 GENE SMYD2 MGC143150 SET and MYND domain containing 2 EMBV3_12159 CAGGGTCCTGGTTCCAGCTTCTTGTATGCAAAGACCACTTCTAGGCTTTAGCTTCTATAA Gene GeneID:524528|NUP133:NM_001076872:8_cdna Constitutive 0 NULL GeneID:524528 28 GENE NUP133 NULL nucleoporin 133kDa EMBV3_11074 CTCACCAACCAGACCTTTCATCTCTCTGCGGCTCCCATCTGTCTGACCCAGCCTTAAATA Gene GeneID:504400|RBCK1:NM_001075161:838_cdna Constitutive 0 NULL GeneID:504400 13 GENE RBCK1 C20ORF18 MGC142317 RanBP-type and C3HC4-type zinc finger containing 1 EMBV3_40169 GGCCAAGATCAATAGTACCGTCCCCAGTGCTTTCTCGTTGCATTACGCTGAAGCTTTGAG Gene GeneID:781486|LOC781486:XM_002700263:2_cdna Constitutive 0 NULL GeneID:781486 X GENE LOC781486 NULL similar to melanoma antigen family B, 2 EMBV3_27268 TCAACCCGGTCGTACGTTCCCCACGTGTGAAGTTTAGTGGCGTCCGTTTCTAATTTATGC Gene GeneID:280817|HK1:NM_001012668:200_cdna Constitutive 0 NULL GeneID:280817 28 GENE HK1 NULL hexokinase 1 EMBV3_06411 TTCAGTATGCCTCTTGTGTTGGCCCAGGGAAGTCCAATCTTCCATTCGAGTTGCGAAGGA Gene BVV0102_047960 - 1 EMBV3_14771 GK000004.2:27641805-27853325 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178735 TCONS_00073626 TCONS_00240375 TCONS_00107095 TCONS_00178732 TCONS_00206816 TCONS_00098202 TCONS_00107075 TCONS_00117596 TCONS_00185576 TCONS_00162301 TCONS_00230834 TCONS_00088420 TCONS_00158397 TCONS_00206815 TCONS_00098199 TCONS_00240374 TCONS_00201119 TCONS_00050935 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00233533 TCONS_00222179 TCONS_00088422 TCONS_00106013 TCONS_00238290 TCONS_00080098 TCONS_00106012 TCONS_00185604 TCONS_00107098 TCONS_00240373 TCONS_00217532 TCONS_00207410 TCONS_00056187 TCONS_00157046 TCONS_00063809 TCONS_00178734 TCONS_00220551 TCONS_00162571 TCONS_00218947 TCONS_00142474 TCONS_00054133 TCONS_00142473 TCONS_00217533 TCONS_00062718 TCONS_00142472 TCONS_00231774 TCONS_00157807 TCONS_00011613 TCONS_00066112 TCONS_00230353 TCONS_00176791 TCONS_00186558 TCONS_00131532 TCONS_00238284 TCONS_00230829 TCONS_00186489 TCONS_00157808 TCONS_00185581 TCONS_00238280 TCONS_00054140 TCONS_00232767 TCONS_00107108 TCONS_00178886 TCONS_00185579 TCONS_00162567 TCONS_00106011 TCONS_00106016 TCONS_00107100 TCONS_00098201 TCONS_00107076 TCONS_00162570 TCONS_00158314 TCONS_00186834 TCONS_00071397 TCONS_00012044 TCONS_00111146 TCONS_00212984 TCONS_00222175 76 XLOC_108508 XLOC_045388 XLOC_147039 XLOC_063006 XLOC_108505 XLOC_125336 XLOC_058448 XLOC_062986 XLOC_071762 XLOC_111629 XLOC_099183 XLOC_140324 XLOC_053207 XLOC_096851 XLOC_125335 XLOC_058445 XLOC_147038 XLOC_122767 XLOC_031050 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_143015 XLOC_135488 XLOC_053209 XLOC_062697 XLOC_144957 XLOC_048982 XLOC_111657 XLOC_063009 XLOC_147037 XLOC_131531 XLOC_125926 XLOC_033990 XLOC_095506 XLOC_038535 XLOC_108507 XLOC_133868 XLOC_099452 XLOC_132266 XLOC_086899 XLOC_031942 XLOC_086898 XLOC_037445 XLOC_086897 XLOC_141262 XLOC_096262 XLOC_007164 XLOC_040830 XLOC_139843 XLOC_106565 XLOC_112610 XLOC_080237 XLOC_144951 XLOC_140319 XLOC_112541 XLOC_096263 XLOC_111634 XLOC_144947 XLOC_031949 XLOC_142251 XLOC_063019 XLOC_108659 XLOC_111632 XLOC_099448 XLOC_063011 XLOC_058447 XLOC_062987 XLOC_099451 XLOC_096768 XLOC_112885 XLOC_043168 XLOC_007594 XLOC_067046 XLOC_130301 XLOC_135484 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_00692 AGGACCGCCAGAGCCTGGACATCAGCTCCGGAGATCGACATCCTGGAGGACTGGACGGCC Variant GeneID:615952|BRMS1L:NM_001076404:116_cdna 802^920 1 EMBV3_31244 GeneID:615952 29 GENE BRMS1L BRMS1L MGC139052 breast cancer metastasis-suppressor 1-like EMBV3_36062 AGAAATCTCAAGGACAGAGGAGCTTGGCAGGCTGCAGTTCACAGAGTTGCAAAGAGTCAG Gene GeneID:509493|MGC143392:NM_001075407:25_cdna Constitutive 0 NULL GeneID:509493 5 GENE MGC143392 NULL spexin EMBV3_11966 AGTATTGTGGGGACTATGAGCTCTTCGTGGAGGCTGTGGAACAAAACACACTGCAGGAGT Gene GeneID:614672|SH3BGRL3:NM_001034763:275_cdna Constitutive 1 NULL GeneID:614672 2 GENE SH3BGRL3 MGC126914 SH3 domain binding glutamic acid-rich protein like 3 EMBV3_12313 AACCTCATGCCAATTTATAAAAGGTGGAATCAGAGAGGTGGGCATCAAAAATGGCAGACC Gene BVT0101_071265 + 0 NULL GK000030.2:3129073-3237204 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43326 ACAGTCGGTCTGGGTGTCGAACGTTTCTACAAGAGGAGGCGATGTTTGTGTCAGGTGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42874 TGCAGGGGGCTCCATGTCTGGTAGAACTAAGATCCTGCATACCTCAGTGATATTCCACAG Gene BVT0102_014556 + 0 NULL GK000001.2:73559863-73677700 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001193 1 XLOC_000273 NonCoding TCONS_00001193 XLOC_000273 NonCoding NonCoding - 1:73563089-73564976 - TSS587 1420 1 TCONS_00001193_2 64 0.192253521126761 3 0.248674443266172 0.000143722142566998 0 9.12365796866461e-05 0 0 6.92739300329431e-05 2.46410660364786e-05 6.66446669421245e-05 0 0 3.22420569580757e-07 0 0 0 0 9.29987487842855e-05 0 0 0.000136348770243822 6.58369496645643e-05 2.13784006269642e-06 0 0 0 8.78256656952467e-05 0.000218310992500562 0 0 0 0 XR_232744.1 LOC100336241 PREDICTED: Bos taurus uncharacterized LOC100336241 (LOC100336241), 0.0 1745 100.00 0.680281690140845 0 noncoding 0 0 0 0 -0.103878698974583 0.5889760531142 0.00432284579474497 0.934006670389287 CTGCAGAGCAGACTCTGTTTTTAAATATATTTAAAATACGTTTTTTGTTTTTAATATCGCAGGTACACGGTTTTTAAAAAGAGAATCAGACTGTAACAAAAAGCTTGTAAAGGAAAACATCAGCGCCCTGCTCCTCCCTTCTACCCATAAAGGTCCACCCACCCACTCTTTTTTTTTTTTTAAAGACTGCTTTGTTCTAGCAGTTTTCTCCTTTAGGTTTGATTTCAGACGTGCTTTCCCGCCGTGTCCTAGTGCTTGGAGCATCACCAGTGCAAGTCTCAGAGATTTTCTAAACCCACAACCGGAAAAGGGCTCTTCTACACTGCAGCTGCCACTGTCTTTCCCAAGGACAGCCTGACCATGTGTGAGAAGAGCTATGCCACAGGCCTTTCCTTCTGACCAGCAAGTGCACTGTGGAATATCACTGAGGTATGCAGGATCTTAGTTCTACCAGACATGGAGCCCCCTGCATGGAAGTGCAGAATCTTAACCACTGGACCACCAGGGAAGTCCCAGGGTCTGGGAATCTTTAACAAGCTCCTCAAGTGATCCTTTGAGAACATTGCCCTAAGGAAATTACTTTTAAAGTCTTTCTATTTGTGTGAGATGTTTTCATAAATGTATTTAGAACAGGCACAAAAGTGATAAAGCCTCAAAACCCCACTTGTTTGGAAAGATTAAACATTATACTTTCATGAACAAATGCTATTTGGGTATTAGACCTAGAAGATCACAGAGGAACAGATCTGAATTACTTGAAATCATCTAGTTCAGTGCCTGAGTGGCTTGCTCATTCTCACAACTTGAATTCCCAGTTCCAACATGGAAAGAAAAATCTGCAGAAGACAATGAGACTTTCTATAGTAAGGGGATTATATGGATTCTTATAGTAGTGGTTTCTTTACTGTAGAAGCAGTTGAATACATTCCCCAGTTTAAAAATATTTCCCCCTAAATTCTCTTCCCTTTCAAGTTTGCAGCATAAACCTTTGGTTCCAAGAGAAACCCCTTGGCTCTAGCAGCTGCTGTAGTTCCAACTCGTTACTGATCTCATCCCTCAAGACTAAAGAACAATAAAGGGAGACCAGATAGCAGTGATTCTCAAACCAGGGAAAACAGACAGGAGAGAGCCCCTGAGAAAATATGAAAGCCTAGTTGTTTAAAAGCAAGGTGGGAAGACTAAAAGGACAGATTTTTTTTTTTTTTTTTTGAGAGTTCTGTAGTATGAGCCCCCTGGTGGCTCAGATGGTAAAGAATCTACCTGCAATGCAGGAGACGTGGGTTGGATCCCTGAGTTGGGAAGATCCCCTGGAGAAGAGAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATTCCATGGACAGAGGAGCCTGGTGGGCCACAGTATATGGGGTTGCAAAGAGTCAGACACGACTGAGT TCONS_00001191 s 3' 3228 TCONS_00001191 s 3' 3228 EMBV3_04792 TCCATCATTGTCAACTGCGTGGAAGAGAAGACCAGCACCAAAAAACGAGGATGAAATGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13552 CAGTGGTAAAGGCGTGGTGAACAAGGATGAGTGGAGCAAATGTTCGCCCTGACACCCATG Variant GeneID:508257|MYL7:XM_002686892:107_cdna 558^606 2 EMBV3_12669 GeneID:508257 4 GENE MYL7 NULL myosin, light chain 7, regulatory EMBV3_18287 CTCATCACATAAGAGGAAGAGAACAATAAACCACGAGGAGGTGGAAGGAGCAGAGTCCGC Gene BVT0102_002167 + 0 NULL GK000003.2:106169325-106190339 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171155 TCONS_00171154 1 XLOC_103750 NonCoding TCONS_00171154 XLOC_103750 NonCoding NonCoding - 3:106173205-106175010 - TSS127723 1805 1 TCONS_00171154_3 106 0.0537396121883656 1 0 0 1.10698180487564e-05 8.1145817892589e-13 0 0 0.000253643057889329 6.78127212583688e-05 0 0 0.000131981815064852 0.000128092805672211 6.14104278945067e-05 2.86126489641261e-05 0.000276245838756473 8.15432945130844e-05 0.000746257517888986 0.000119572846020045 2.78015421669066e-05 0 3.18304798723819e-05 0 0.000127446308255234 0.000426935801129832 0.00117027273611615 7.63475323101371e-06 0 0 4.25714134990273e-05 4.30324919104175e-05 6.66177435142399e-06 XM_005204746.1 RIMS3 PREDICTED: Bos taurus regulating synaptic membrane exocytosis 3 (RIMS3), transcript variant X1, mRNA. 0.0 3254 100.00 0.998891966759003 NM_014747.2 RIMS3 Homo sapiens regulating synaptic membrane exocytosis 3 (RIMS3), 0.0 1409 76.49 0.997229916897507 0 noncoding 0 0 0 0 0.0240743433040848 0.824913139787191 0.0682222762878883 0.257519235850958 CTTTCTTCCTCTCCCCAGAGTTTTCTTCTCCAATATCCTGACCCAGAAAGAGGTTCCTTAAAATGCTGCTTCCTGTACGGGACTACTGTCCACCTGCATGATCAGGGAGGAGATAGGAACGTAGACTCGTCCCCTACCTTCTCCCTTGAGTCTGCTTTTCACTCAGGTCAGAAGAGATTGGGGCAAAACAAAAACAGTCGAGACTGAGGGGCAAGCGTGCCTCGCCTGATCCAGTGAGGCCTGATGGGGACTGGATCGGCCTGGGCTTGCTGGGCAAGGGTTATTTTGAAAGAGTGCCTGAGCATCTCAGAGTGATGTCAGTGATGCCAAAGAGAGCAACTTGGTCTCCTCGGGCAGCAGCTCTGCCAGCTGAGCCGCACACGTGCGGCTCAGGTGTCGGCATGCCCCATGGCGGGACCTTGTTCTCTGACAAAGGGCTTAATCTTTCCATGTAGCAAAGCAACTTCCTCTCCCCCCAACCCTGAGCTCAGGCCTCTGTGGGCCCAGTAAGGCTGTGCTTGTGAGGGAAACTTGCATTCTTCCAGGGCACAGACTGGCTTGGGGAGGATGCTCGCCACAAAGCATGCGTGTTACTGCTCCAGGAGAACCTCCCTACATTCTGGTTGGAAACTTGGCCAGCAAGGGTAGGAGCCTTCAGCCTCCCAGGCAGTTCACATTGATGCCAGGAAGGTCCTTGGGCCTGGGTTCCAGGGAGCTTGGCAAACAGAAATGGGCCCTGGGAATCCCAAAGGCAATAGAGCATCCGCCCCAAAGGTCAATGGCCTGGACAGCTGGCTACAGAGAATCCAAGGCTGTTACATACAGAGAAACTGTGACCTTATGCAAGTCTCCTCCTTTTTCTGGGTCTCAGCTTCCTCATCTGCAAAACCAGAGCATTTGCTAGTTATTTCATGGTTCCCTCCAGGTTTTTAAAGTCTGATCTGGAGCTGATGAGGATTGTGAGCCTGATATACCTGGCACCTGGTCTCACAGGCTGGTTCCTTCCAGCCCTGGGGACAGGTCCTCACCCATCCACGCCCAGATGCTGCTTCTGACAAGAACTCTGGGAATCCTAGCGGACTCTGCTCCTTCCACCTCCTCGTGGTTTATTGTTCTCTTCCTCTTATGTGATGAGATAATTAAGGGTTCTCTGCAATGGACAATTTCCAAGGTGCTGATGTGAGGTTACAGCCTCAGCTGCATCCTGCGTAGGTCAGTATCCCCACCAGCAGACGATGCTGGGTCGGTCCTCATCTCTGCTTCTAGAACGGGATCTGTGGGAAAATCTTAAAAGAAGAGGCTCTCTGATGGGAGGAGAGAGGGAACTTATTTCCCTTCAAAGTATTTTGCTTCTTGAATAAAAAATATATATATATATCACTCTTTTTCCAGAATGCCTTTTGCAGACACCATCTCAACAGGCAGAGTGGCTGCTGCTTCCTTAGGAAAAGCTGGCCTGATTGTTTCATTCACTCCTTGAGAATGTAAATTCACAGCAGGCAAGAACCCCTTTTTTAGAGTTTCCAAATGCATCCTGCGGAGAGAGAGCGGATAGGGACTGACAAGCACACTGTTTAGATAAGAAGCAGTTAGCCTTTTACATTTTCTATATGCAGCATCTTCCCAAACTCGTTGTGGCTCCCAGGTGGCAGGTGGATGGCTGGGAAGGACTACCGGCTGTTTCTTACAACATTCTTGCCAATTCCCTTGAGGAGAAAATCCTTCACATGGCTTCTGCATGTACAGTATTTGGGCAGCACCAAAAAAAAAAAAAAAAAAATTATTAAAGTCAGTTTGAAAATGGT TCONS_00171147 TCONS_00171148 TCONS_00171149 TCONS_00171150 TCONS_00171151 TCONS_00171152 s 3' 1812 TCONS_00171147 TCONS_00171148 TCONS_00171149 TCONS_00171150 TCONS_00171151 TCONS_00171152 s 3' 1812 EMBV3_05347 GCCATGATAATGCCCATTTATGCCCAGTGTAGTAATATGAAAGAGTCCTAGCCAGGTTTC Gene BVV0102_169059 + 1 EMBV3_38382 GK000010.2:47957475-48071763 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43083 GCTTTGCTGAGTCTGCCATCCACACTGGATTCACTTTCTGCCTCTCCTTCTGTCATTCCA Gene GeneID:526857|LOC526857:XM_002693792:98_cdna Constitutive 0 NULL GeneID:526857 15 GENE LOC526857 NULL similar to olfactory receptor Olr344 EMBV3_01119 CTATACAAACCTTTTTTTCTACTTTTAGATAGAAATGTCTACTTTTTCAGCAGTTCTGTG Gene GeneID:534669|GTF2I:NM_001102177:257_cdna Constitutive 0 NULL GeneID:534669 25 GENE GTF2I GTFII-I MGC166157 TFII-I general transcription factor IIi EMBV3_26064 ACCAAGGAGAGTGAGCTGAAGAGCAAGGAGATCCTGGAACTGCTTTCGCAAATTCTGCAG Variant GeneID:515913|SPATIAL:NM_001038121:317_cdna 573^743 1 EMBV3_35480 GeneID:515913 28 GENE SPATIAL C28H10ORF27 MGC133891 chromosome 10 open reading frame 27 ortholog EMBV3_22553 TACTGTGACTTTCCTCGGTTCATCAAACTTGCCTGCACAGACACCTTCAGGCTAGAGTCC Gene GeneID:515694|LOC515694:XM_002690713:371_cdna Constitutive 0 NULL GeneID:515694 10 GENE LOC515694 NULL similar to olfactory receptor Olr791 EMBV3_19682 CTCTGCCACCTTTGCTTATGTCCCTCCTCAGCTGGAACACGACGCCAGCCCACTGCTGGT Gene GeneID:524523|TIFAB:XM_002689202:89_cdna Constitutive 0 NULL GeneID:524523 7 GENE TIFAB NULL TRAF-interacting protein with forkhead-associated domain, family member B EMBV3_03321 CTGGTTCATCCCTAAGGGTCCCAACCGGGGTTGGCTGATTGCAATTCTGGCCCAACTCAA Variant GeneID:338075|ATP6V0E1:NM_001034050:109_cdna 159^206 2 EMBV3_01125 GeneID:338075 20 GENE ATP6V0E1 ATP6V0E MGC128729 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 EMBV3_10896 GAGAAGCCCTACCAGTGTAATGAATGGAGGAAATCCTTCAGCTTAAGCTCAGCCCTTACT Gene GeneID:100336123|LOC100336123:XM_002689947:119_cdna Constitutive 0 NULL GeneID:100336123 8 GENE LOC100336123 NULL zinc finger protein 345-like EMBV3_39311 CTCTGGAGAGTCTTGAAAGTCCCTCTTGAACAGAGCTGCCCCTTATTTGAGAATCACTGT Gene GeneID:522919|GNPDA1:NM_001080287:241_cdna Constitutive 2 NULL GeneID:522919 7 GENE GNPDA1 GNPI glucosamine-6-phosphate deaminase 1 EMBV3_34100 TGGTCCTTCTTCTAAGAGGCTTAATGTTTACCTGATGCGTTAACTGTTTGTTAATAGGCC Gene GeneID:281289|LYZ3:NM_174104:13_cdna Constitutive 0 NULL GeneID:281289 5 GENE LYZ3 NULL lysozyme 3 EMBV3_14544 TGCCATCACTCTTACCCTGCCTGCAAAAGCCCTCCGCTGACTCCAAACCTCTTCAACATT Gene GeneID:100297485|LOC100297485:XM_002687934:169_cdna Constitutive 0 NULL GeneID:100297485 5 GENE LOC100297485 NULL hypothetical protein LOC100297485 EMBV3_24248 CGCGTCTTAGCAGTCACAAACCAACCAGAAAGGTGGAGAAGGCATTTGGTCTCATCAGCT Gene GeneID:529700|RPRD1B:NM_001101134:1177_cdna UTR3_Alt 2 NULL GeneID:529700 13 GENE RPRD1B C13H20ORF77 Regulation of nuclear pre-mRNA domain containing 1B EMBV3_41226 CTCCGTCTGGAAGTGAGGGGTTCCCTTCAAAAGTGCTGAGGCTCAAAGGGTCTTCTGTAG Gene GeneID:618906|MAPK11:NM_001080335:62_cdna Constitutive 0 NULL GeneID:618906 5 GENE MAPK11 MGC139500 mitogen-activated protein kinase 11 EMBV3_27864 GTCTTTCCCCCTTAGCTGTATCAGTTAGCCAGGATGCACAGAAAAAGGACACTTGAGCTG Gene GeneID:282855|PCK1:NM_174737:761_cdna Constitutive 0 NULL GeneID:282855 13 GENE PCK1 MGC137419 PPCK1 phosphoenolpyruvate carboxykinase 1 (soluble) EMBV3_15810 CCTAAGAACAGTTTCTAGTTCTAACCCAGCAGTGGTCCTAAGGAAAACTGAATACAAGTG Gene GeneID:100336829|LOC100336829:XM_002697124:46_cdna Constitutive 0 NULL GeneID:100336829 22 GENE LOC100336829 NULL makorin ring finger protein 2-like EMBV3_41458 AGGTCCAGGCCGCTCAGGTTCAGGCACTCAGAGGCACAGACTCAGTTGGGCCTGCGTTTT Gene BVT0102_230509 + 0 NULL GK000009.2:299547-319813 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238307 1 XLOC_144974 NonCoding TCONS_00238307 XLOC_144974 NonCoding NonCoding - 9:307618-308187 - TSS177985 569 0.998242530755712 1 0 2.39115894276449e-05 2.04899650479412e-05 2.6063452093597e-06 3.89181129318748e-06 0 6.98507351723378e-07 1.28112925146764e-06 0 9.61777556764745e-06 1.40604878919987e-05 1.89983098771122e-05 1.64589503930309e-05 0 4.54065511938111e-06 1.08865668507013e-05 0.00014636344889864 9.13516993923914e-05 0.000284352342860835 1.14569957595269e-06 0 9.56562355882639e-06 0.000121986935849489 0.000101178527657369 1.48478436081036e-05 1.92795835861377e-05 0 1.28715929570525e-05 4.72059725845102e-05 0.000347245286616576 3.42271723358107e-05 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-16 91.5 85.19 0.135325131810193 0 noncoding ACATCTGCTTGAGAAGGTGCGCCGGTTTTACACCCAGATAACCGAGTGGCGGGGAGGCGATAAGTCGCAGCATTGGCGCTCGCCAAACACATCACCTGAGCTGCTAGGACCTGGGAAGAGCACAAAACGCAGGCCCAACTGAGTCTGCGCCTCTGAGTGCCTGAACCTGAGCAGCCTGGACCTGGGAGGTGCATGCAACCCAGGGCCGGCCTCGGATTGTTCCCGGCGGAACACCCTAGAGCCCGAGCACTGTTGGCAGGGTGGCTACATGTGCCGTGAGCGGGGGCACACCCAGGGTGGCTGAGGCACTGCGAGCGCACGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCTTCCCCACAGCGCGACTGAACAAGTAAGCCTAAAAAAAAAAAAAAAAAAAAGTGTCCTCCACCGTCCCCTTTGTGTCAGGGCGGAAACCAGATACTGAAGAGACTAGCAAACAGAAGAAGCTATAACAGGGAAACGCCTTGGAAGCTACAGGCAATAGATCAAAACCCTGTGGTTACTACGGACTACATAGGAAGGGGCCTATAGATCTTGAGAA TCONS_00234582 . 3' 31247 TCONS_00234582 . 3' 31815 EMBV3_23352 TGCAATACACTGTGTTTGCTGGTGCTATTTTTATACAGTGAAGCAACAGCCTTGCAGGAG Gene GeneID:317723|GCSH:NM_174844:5_cdna Constitutive 0 NULL GeneID:317723 18 GENE GCSH MGC140601 glycine cleavage system protein H (aminomethyl carrier) EMBV3_38653 TTCTTAACATACTCTCTCCCCCCTTCACACACTCCTGCTGAAAGATACTCGTCCAAATAA Gene GeneID:512205|RCSD1:NM_001034418:14_cdna Constitutive 1 NULL GeneID:512205 3 GENE RCSD1 MGC128398 RCSD domain containing 1 EMBV3_21436 CCAGAGAGCATCCTTTTCTGCATCTCTAGCTTCCACAACTGCAAGGAGACATCATCAACC Gene GeneID:524732|CHAT:XM_002698953:70_cdna Constitutive 0 NULL GeneID:524732 28 GENE CHAT NULL choline acetyltransferase EMBV3_34256 AAGTATAATGATTTATATAAATTCCAGCAGGAAAATTCTGTTTGAACATTTCCGGTCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16262 TCGACTGAGTGGCGGCAGCCATTACAACAGCTTTTCCCCAGATCTGGCTCTGGACTCACC Variant GeneID:535402|FAM76A:NM_001015660:233_cdna 558^644 1 EMBV3_37617 GeneID:535402 2 GENE FAM76A NULL family with sequence similarity 76, member A EMBV3_41821 CCCCCAGAGAGACTTGTTGACCACAAATATCATACACTGCCTTCCTGCTGGCTGCCTGCA Variant GeneID:511439|SLC28A1:NM_001037458:108_cdna 77^372 2 EMBV3_11344 GeneID:511439 21 GENE SLC28A1 MGC128078 solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 EMBV3_28943 TGGCTCGGTTACCTAAACAGCTGCATCAACCCCATTATATACCCATGCTCCAGTCAAGAG Gene GeneID:100335438|LOC100335438:XM_002689792:31_cdna Constitutive 0 NULL GeneID:100335438 8 GENE LOC100335438 NULL alpha-1A adrenergic receptor-like EMBV3_27252 TCCTACCTCAGGAGGCTGAGGAGGAGCGATGGTCTGACAATGAATCTGATGATGAAATTG Variant GeneID:511267|STARD3:XM_002695960:275_cdna 746^844 1 EMBV3_36773 GeneID:511267 19 GENE STARD3 NULL StAR-related lipid transfer (START) domain containing 3 EMBV3_05232 CCTGAGCCATGTCCACCATTGCACCAGCTTCTTCTGAAGCCAGACATACACATTATCACC Gene BVT0101_014599 - 1 EMBV3_24824 GK000014.2:68343023-68377529 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05311 TGGGTCCCTGAAAGATGTGTTTAAAGGCTTCGACCCCACCGCCTCCCCTTTCTGCCAGTA Gene GeneID:521686|ZC3H4:XM_002695106:574_cdna Constitutive 0 NULL GeneID:521686 18 GENE ZC3H4 NULL zinc finger CCCH-type containing 4 EMBV3_34534 GACTTCCCTCTACTCGGTCCCCCTACAAACTACGGACTCTACGAACAGCTGAAGCAGAAA Gene GeneID:615316|C1orf158:NM_001038207:195_cdna Constitutive 0 NULL GeneID:615316 16 GENE C1orf158 MGC133902 chromosome 1 open reading frame 158 ortholog EMBV3_06907 GAAAGTAACTCTACGCATATCACCAAATTGGGCTGACCAACATCCCGACTTGACCGCTGC Gene BVV0102_092420 + 0 NULL GK000002.2:133956671-133974309 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09936 TGGGGTTTAAGTCCATCTATATGTTGAAGTTCCCTGAGACAGACCAGCTCTCCGGCTACC Gene GeneID:520739|SNX12:NM_001103257:59_cdna Constitutive 0 NULL GeneID:520739 X GENE SNX12 MGC143193 sorting nexin 12 EMBV3_22362 TGGGGAGGACTTTAGAGACAAGCTGGACAAAAGTGGCAGCAACGCCTCATCGGACTCTGA Gene GeneID:615585|BARHL1:XM_002691650:374_cdna Constitutive 0 NULL GeneID:615585 11 GENE BARHL1 NULL BarH-like homeobox 1 EMBV3_17678 TTATCCTGGCCCTACCACATACAACCTAGAGATAAAGCCACCCAAGAGAGTCAGATGGCC Gene GeneID:615099|LOC615099:XM_002686144:255_cdna Constitutive 0 NULL GeneID:615099 3 GENE LOC615099 NULL similar to Uncharacterized protein C1orf88 EMBV3_19689 ATTGTCTCATCCTTACCAACATCCTCCACATCAAGTCCACAGAAGGCAGGTCCAAAGCCC Gene GeneID:516940|LOC516940:XM_002699139:97_cdna Constitutive 0 NULL GeneID:516940 29 GENE LOC516940 NULL similar to olfactory receptor MOR167-2 EMBV3_18967 CGGGTTTGCTGCTGAGGGTGTGGAATCGGGGACAGTCTTCAGTGACATTAATCTACAGGA Gene GeneID:517857|C3H1orf123:NM_001038130:55_cdna Constitutive 5 NULL GeneID:517857 3 GENE C3H1orf123 C1orf123 MGC133492 chromosome 1 open reading frame 123 ortholog EMBV3_05837 TCAGCTTTTGACCTTCAGGCACCTCCCCATCCTTCCTCCAGTCCTCACCTTTAGCATGAT Gene BVV0102_212720 + 0 NULL GK000021.2:31079937-31081076 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119114 TCONS_00119116 TCONS_00119110 TCONS_00119109 TCONS_00119115 TCONS_00119113 TCONS_00119112 TCONS_00119108 1 XLOC_072817 Coding TCONS_00119109 XLOC_072817 Coding Coding IDH3A 21:31063673-31080794 j TSS89280 2538 1 TCONS_00119109_2 231 10 0.852336448598131 0.000380248045062249 4.22304572476499e-10 0.000224243150250509 0.000229016775076354 0.000417938136906871 0.000297361733783611 0.000896952476507471 0.000231737648022269 0.000395917107291127 9.05417751793891e-05 9.15143285922581e-05 4.25529029017237e-06 8.4758737483253e-05 2.32354563667752e-05 0.000141990838964699 0.000203024032399832 0.0113345705073497 0.0104134368803585 0.000281755881486613 0.00097431195820969 1.84560308632841e-07 0.00502099773195755 0.00209235022041634 0.00350214065699743 0.00049123713378332 0.000755833878673422 0.000339080783368237 0.00152891761299201 0.00144172533953229 1.08625125391335e-08 NM_174644.2 IDH3A Bos taurus isocitrate dehydrogenase 3 (NAD+) alpha (IDH3A), mRNA. 0.0 1802 99.90 0.395193065405831 XM_005254333.1 IDH3A PREDICTED: Homo sapiens isocitrate dehydrogenase 3 (NAD+) alpha (IDH3A), transcript variant X1, mRNA. 0.0 1404 76.56 0.732072498029945 TCONS_00119109_2 sp|P41563|IDH3A_BOVIN IDH3A_BOVIN Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; 6e-147 419 98.53 0.878787878787879 1 coding 1 1 1 0 1.40607330291888 0.0312294190750523 -0.206019238884146 0.0474927224795319 CCAGACGCTGGCTGGGCGGCTGCGCACTACTGCCGCCGCTGTCGCCGGGGTGAGAGGAGTGGACGCGATGGCAGGGCCCGCGTGGATCTCCAAGGTCTCTCAGCTGCTGGGGGCATTCCACAACCAAAAACAGGTGACCAGAGGTTTTGCTGGTGGTGTTAAGACAGTAACTTTAATTCCAGGAGATGGAATTGGCCCAGAAATTTCTGCTGCAGTTATGAAGATTTTTGATGCTGCCAAAGCACCTATTCAGTGGGAGGAGCGAAACGTCACCGCCATTCAAGGTCCGGGAGGCAAGTGGATGATCCCTCCAGAAGCCAAAGAGTCCATGGATAAGAACAAGATGGGCTTGAAAGGCCCTTTAAAAACACCAATAGCTGCTGGTCACCCATCTATGAATTTATTGCTGCGTAAAACATTTGACCTTTATGCAAATGTCCGACCATGTGTCTCAATCGAAGGCTATAAAACCCCTTACCATGATGTAAATATTGTCACCATTCGAGAGAACACGGAAGGAGAATACAGTGGAATCGAGCATGTGATCGTGGATGGAGTTGTGCAGAGTATCAAGCTCATCACCGAGGCAGCGAGCAAGCGCATCGCGGAGTTTGCATTTGAATACGCACGGAACAACCACCGGAGCAACGTCACAGCCGTGCACAAAGCCAACATCATATGGTCCAAGACCCGTCCCAGTTTGATGTTCTTGTTATGCCAAATTTGTATGGAGACATCCTTAGTGACCTGTGTGCGGGATTGATTGGAGGTCTTGGTGTGACACCAAGCGGCAACATTGGAGCCAACGGAGTTGCAATCTTCGAGTCGGTTCACGGGACCGCCCCGGACATTGCGGGCAAGGACATGGCCAATCCCACAGCCCTCCTGCTCAGCGCCGTGATGATGCTGCGCCACATGGGGCTTTTTGACCACGCTGCGAAGATTGAGACGGCGTGTTTTGCTACAATTAAGGATGGAAAGAGCTTAACCAAAGATTTGGGAGGCAATTCAAAGTGCTCGGACTTCACAGAAGAAATCTGTCGCCGAGTAAAAGATTTAGATTAAGGCTTCTACGGATGGTATCTGCATCAGTCACTCCTAGTGGACGCCACATCAGCCTGTGTTAGAATACTTCCCATTATGTATGCATTTATGCATTTGTTGCTTGTTTCTTGACAGAGTACATTTTTAGACCTGGCCTTTTTTCTTAAAAATCTGTGCAGAGGGTGCAGGTAATGTCCCCAGGCCTGCTTTCAAAGGACTTCTTCCAAGTGCTTGTTTTATTTATTAAACGTCTATCTGGTATACATTTTTTTGTAAACTCTCAAGTGAACGGTTATCATTTGCTGTTGTTAACCATTTTATGCTTCAGTTAAAATAGTTTTTCTTTCACTGTAAATATCATGATACAGAAATACTAAGAGAAAACATCTAACTTTTTAAAGAAAAACACTGATATTCTTGGTTTACGAAAAATATAATGGAGATAAAGTAGAATGTTGGCATAATAGCATGAGAGGATATTCTTATAAAACTAAATGGGCACAAGAGAAATTTCCTGGGAAAGTTTACATCAAAAACAGTGAATATGGTATATTTCTTAGTGATATGGAAAGTAAAGACTAATTTGTACTTTACATGAATTACTGAGTATAAATAAAGACTTTGGATCGGAGAATATATAATGAGAGATGTAATTTTTGTTCAGAGGATACGGGTAATATATTGGGTATAAAGACACAAGTGGATCGTGTGTTCAGTTATTTTTGTTATCTTGAGATTTACTGTTCTTGGTAAGAGCTTTTAATGAAGTGAAGGGGTGGTCCTTCCTTTTCACTGGACATATATCAAGCATGGTGCCTAACACAGCCCTCGATCTCCTGTCCCTTGGTCCCTTGGGGGACCCTGACTCGGACCTGGGAGCAGTCCCTCTTCCGCAGCCTGTATGGCGCTGTCCAGAAGTGGACCATGCTCCCACTGATAGGGCTAACAGGCCTCACCATATAAATTTTGACTGCAATTGAGGAACCTGGAGTACTGGCTATTAATTTTACATTTCACTGGCTTCTCCTTCCCCAAAGCACCAAATCACCACCCTCTGCCTCAGCACCACCAGGGAAAGAGGAGCTGCAAACTCAGCCTGAATTGATTCACAAAATCGTGCCACCCTGGGGCTTGGCTCAGCTTTTGACCTTCAGGCACCTCCCCATCCTTCCTCCAGTCCTCACCTTTAGCATGATTTGTCTTTAATCTTCAGAAACTGAGTCACTATTTTCATGAACTCTTTGGTCCAAACCAAAGGCAGCTCATGTCCTCCTTGGCCCTCGTGTAACATCTCCAACCTGCGGCTTTACGTTGTCACGGGGGGGTTTTAACCACAACCAATACTCCTGTCTGGGTCCTTTTTTGAAGCTCGAAACCAGACAAATATCTTATATGTATTTTATTCTGTTTAAACTGCTGCTGCTTCTGTTTTATTGAATTGTGCTAATCATCGGTGACCCTTCGGTTTACACAAATAAAGAATTCCCAAACGAA EMBV3_19888 CAGATGCGCTTATGGCCACCGGAAGGTCACTGCTTCTAGGCCGTTTGTGTGTCCTATGTA Gene BVV0102_356481 + 0 NULL GK000016.2:2683563-2690257 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06266 CACTGAAGCAGCTCTCATGGGAAATCTGTTCGGAGATAACTGGTACTACATACATTTACA Gene GeneID:541067|MINPP1:NM_001038575:43_cdna Constitutive 0 NULL GeneID:541067 26 GENE MINPP1 MGC134477 multiple inositol polyphosphate histidine phosphatase, 1 EMBV3_14164 TCTGGAGCCCTGATAGTGTCAGTATTGGGGAAGAATGGATATATTTGAGAGACATCCATG Gene BVV0102_210677 + 0 NULL GK000006.2:38812057-38840863 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16520 CAGATTTGAGTTAAAAGTGGAAGCGGGCTAGCAGCCATCAGGAGGAGGGCAAGTTCAGAA Gene BVT0102_008547 - 1 EMBV3_38794 GK000006.2:13272315-13381577 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202472 TCONS_00202470 TCONS_00202481 TCONS_00202474 TCONS_00202479 1 XLOC_123983 Coding TCONS_00202481 XLOC_123983 Coding Coding CAMK2D 6:13265947-13274174 j TSS151946 5274 4 TCONS_00202481_4 109 0.0599165718619644 2 0.359105275954291 0.00049022579130874 0.000247773426179552 0.000197345650093122 0.000281640710571631 0.000340441094970621 0.000102446813698216 0.000145790236278813 0.000453428045903877 0.000474422128828315 8.82846148872456e-06 1.3773565672665e-06 1.02327354492277e-05 2.01975622758518e-05 1.69586767068755e-05 0.000198200108729303 1.23699466469676e-81 1.27322714092901e-34 4.29204638617475e-170 0.000423242168951946 0.000556567529666756 0.000128946699211019 1.07010793704884e-57 1.68979625069438e-123 0.000170919197256769 0.000350593994916142 0.000535562629587187 0.000110942869097336 2.17219428334959e-59 2.49939390255478e-06 4.00522676115515e-156 NM_001046333.1 CAMK2D Bos taurus calcium/calmodulin-dependent protein kinase II delta (CAMK2D), mRNA. 0.0 3119 99.83 0.329351535836177 XM_005263256.1 CAMK2D PREDICTED: Homo sapiens calcium/calmodulin-dependent protein kinase II delta (CAMK2D), transcript variant X6, mRNA. 0.0 2233 73.62 0.67993932499052 TCONS_00202481_4 sp|Q2HJF7|KCC2D_BOVIN KCC2D_BOVIN Calcium/calmodulin-dependent protein kinase type II subunit delta; 2e-50 169 100.00 0.697247706422018 1 noncoding 0 0 0 0 -0.0490207525303791 0.665530165579257 -0.00525278275064811 0.911466991801363 CAGTGCTCATTTCCAAGGTAAAAATGTGTATTAAGATGAGTAATGAGGTAAATATTTATTCAGATTACAAGAATTTTAATGGTATCAGATAAAATAAAAGAAACACCTGCAGAAATCCTCCAGGTCACCAAAAAAACTATAAAAGAGAAGTTCCTCTTATCCTTCTCCTAAAGACATTAGGTATAAGGTATTTGCATGATGCAGGGAGTAAATTTACCTTTTGCAATAAAATTTTTATGAATTAAAGAGGAATCATAGTAATGATTCAGATAATCAGGTTTATGTCCAGTAATTATAAGCATTAACAAGAATATTTGCGTTGGCACGCATTTTCACATTCAATGAATTGCTTTTTCTTATATGCACTAGATATTTGCAAGGAAACAAAGATAATTATGTGGTAAACTGGCCTTAACAAAACTTCAATAAATGTTCTCATATTCTCTGTTTCGTGCTGTGATTGACAGCATGTCGTAATGTTTCCTTCAGTAGGCTGTAGCTTGATACCACCTCATCTGTAGTAAACGAATAATGAACCCATTAATATTGTAACCTACCTCAACATAACACTGCACTTCATTACTCTCCATAAATACATATTCATAATAATGGGATATTGTTTTTTATCAGACTGTAGCAGTAAGTAATTAATTCAGATTGTTCCTAAGAATGAAGGATATGTTTGGATAACAGGTAAAACAGTTCTGCCTGTTTTAGTGATCAAAGAGAGTAGCATCAATCAATATCTGCACTAAATCTTCATCTCTCTTAGTCATTGAACAGTCAGAATAAATAGATGTTGTCAAAACAACAAAGGCTGGAGCCTATTGAAGTGAAGTCGCTCAGTCGTGTCCGACTCTGCGACCCCATGGACTGTAGCCTACCAAGCTCCTCTGTCCTTGGAATTTTCGAGGCAGTAGTACCGGGGTGGGTTGCCATTTCCTTCTCCAGAGGATCTTCCCGACCCAGGGATCAAACCCGGGTCTCCCGCATTGTAGACAGACGCTTTACCATCTGAGCCACCAGGCAAGCACGGAGCCTACTGAGGGCTGCTCAATCCAAGGAGAGAGCTAGAGGATCAGAATCAGGCTATATGGCCAACACCAAATTTTGGATTTTTACTGGCTAACCATAATTGGACTACTGGAATGGACTGTACTAAATAAAGGAGCCACTGGATGAGATGGGGAAACTGATTCACACCATGGCCAGCCTATTTAGAAGACAGCAGTCTCCATGCTTAATACATGATGTATTTCCCTTGCCCCAAGTACTTTACCAACTGGCGGAAAAAAAAAACAACAGCCCACAGGAAATCCTGTCAACTGTCCCAGCGGTTCTTTATTGGAAAAATAAGCTGCTCTGTGCACCTGGGCCAGCCCTCCTCCACCTCTGTTCATTTTATGGCTTGTTCCTAACCACTTCCCATTATAAATAATTATGTCTCTCCAGCTTTTTCACCCAAAGTTTGAGTGGCGTACAATTTACCCACAAAGAAAATAATGACTGTATCTACTTCAGCTATTTTTCTTTATACTTTGCACTCAATTCTTTGCGTTAGTGAATAGTTGAATGAATGAATGACATTCTATTTATTGGTCCCAAGGGAAGTTGTTATTGGTTTCGGTTTACTCTGCATAGAAACTAAGCTCTCTTTTCCATGTTCTTCTCTTCCAGCTTTGTCCAAAAGCAATAAACCCATCCACACCATCATCCTGAACCCTCATGTGCACCTGGTGGGCGACGATGCTGCCTGCATAGCGTACATTAGGCTCACCCAGTACATGGATGGCAGTGGAATGCCAAAAACAATGCAGTCGGAAGAGACACGTGTGTGGCACCGCCGGGATGGAAAGTGGCAGAACGTTCATTTTCATCGCTCGGGGTCGCCAACAGTACCCATCAACTAAACATCAGCAGTGCCACTTCTGCAGTCCTCTGTTCTCAAGGCACCTGGATGGTAGCGCTGAGCCGTCCTCCCTCCTCTTCATGCATGTTTCCGAGTGCATGAAGTTGTGAAGGTCCTCTGTGTAATGCCTATGTGATGCATCACCTTGTCATAGATTCCTTCCTATACATTGTTTACACTTCAACTACGGGGATGTTCCATGCAAACTTCAATCATTGTCGGCAAACAATAGGGGGAGGTGAGCAAAAAAAAAAAAAAACTCCGCAATATTCCTGAGTACAATCTAGTCATCCAGTTTCTCTGTTTATGCCAAGACTTAACAGACTTCAGAATTACCATTCTCTGAATGAGAGTTTGTAAGAGAAAAGTAAATTTTTAAAAACTCTTTGCTGTTCATATGTTTTAGCTTGTTTAACAAAAAAAGTCAAAAAAACAAAAACTGACCTTCAGTTTCCTGGTGTGATCCTGGCTGCAATGGATGATTTTTCACTGAAAGCTGTGTTGCTGTTACACAAAGTGGGTTGAATCATTTATGAATGTGGGAGTGAGAATTAGTGGGTTTGCTATGATCTAAAGTCATGTCTTTTTTGGTCAAACTACATAAACTGGAAAAACTCCCATCGCTGACAAGTTTGATCACTTTAGGGTATACGCTTACTGTTCTGGTGAAATTTGCCGAATTGAATTTTTTTGTTCTTTTCTCAAACCTGTGCTTTTTAATTTTTTCTTCATTTTCTCCTATTTCTTTATCACTTTTGTTTGCTTCTTTTTGTATCTTTTTTTTTTCATTCTTTATCTTTTTTTTCCTGTTTAGTAGTGTGAATAAAGTGAAATTTGCATAATGAAGGTAAAATAAAAACTGAGGCCTCTTGGAGGTGGCTGGACTCATACTTCGAGCATCTTCAGGGCCCACAGAGATGAGGTCAAGAAGCGCTCAAAGGTTTGTAATTCTGCTCTAATTCGGACATAGGGATCCTAAGTTGGAGATATTAGAACAGTTTAAACGTATAGGAAAGCAAGTAGGATCCTCCTGCACCTGCAGCATGTCTTACTGAGTGGAGCAGTTGCCAGGACAGCGCCCAGCTGGTCATGGATCTGGATTTTGTGCAGAGGCACTTTCTTCTGCCTCGCCCCTCCTGCGTGATCACTGCCAGGCTTTGGAAGTTCAGAGGATGGGGAACACTGCAGGCCTCTCTGAGTGTTTTGAACACGATCTATGTGACTCGTGGTTTTGTAGCTACTCTCAAAGTCTGAGTAAAATTACGCTTCCCTTCTAGGAGTTGTTAGGATTTTCCTGCTTAAAAAAAAAAAAAAAAAAAAAGGGAAATGTCCCTGTTTCCTTTGTGCTTCTCATTTTTCCCTTGTTTATTCCATTCCTGTGGGGCTTTTTCTCCTCCCTGAAATGCTTTATAGTGCATGGTATCTTCATCAACCTTATTTTAACAGCAGTAATTCACAATCCTCAGAAGCCTATTTTTAAAGCAGAAGCAAAAAAAAAAAAAAAAACAAACAAAAAAAAAAATCAACCCTCCCTCTTTTCCCTCATTTCACGTTTCTGTGTTGATTACTAATCACCTTAGATGTTGTTACTAGTGGATGTATGGTAGATGGATTGAAGCTTTTCTGATAATTATTACACAATTTAAAACAATATATATTTAAATATATACAGTAAATGTATTGAGCCATGTTAACCTGCCAATGAGATCTGTGAAAAAGTAATCGCCTCATTTTTCCCTTTTTAATTTCTTTTACCTTTTTGTGAAATGGCTATACGTGGCATACATGTATTTTAGAAAAATATTAGGTATAGAGTTTTGTTTTTTTTTTTTTACACTTTAAGCATGTGGTGTTGAAGTATTACTGTAGATCAAGTTTGTCTTCCACACTAAGATGTGAGGAAATTGTGATTTGTTCTCTCCACCACAACAGAATTACACAATTATCTTCTCTCATTTTGAAACACTGCAGTTTACCATGGGACACTGTATATATTTCTTGCCATAATGGTAAATGACTGATTGATATATTTAAGACTTAATAAATTTGTGATTTCTGCTGACAATGTGTCCACTTTTATTTCTTCAGGGATACTCTATTTCTGCATGTGTGAGGCTGGCTAGTGCCAATGGCCACACATCCTATATGGTCTTATTATTACAGAATTCACCTTTGACATTAAGATGAAGTTACTGAACTGAGCTTCCCTCTAAGAATGAACTTGGCGATAATGACAATTTACTGTGTTATTTGTGTGCACAAAAGAACAGTCTCTCCTAGGAAAGTTTTTCTGAGAACAAAGCACTTGACACAAGAGTCCTAAAAATTTCTGAACTTGCCCTCCTCCTGATGGCTGCTAGCCCGCTTCCACTTTTAACTCAAATCTGACATCTGACTATGTAACACTTCTGGATCATCGCCAATATTCAGGCAAGCACCTCATCTCCTGTTACTCCAGCTTAAATCTGAGTGTACATAAGTAGTGAACTTTGTTCAGTTTATTAAACGCCCTACCACACGAGGTTTGTTTCTAACCTAGAATATGCTTCCCCTACTTCTTCAACATAACTCATACTCATTCTTTCAAATTCAATTTAGAATAACATCCCCTCCAGCAAACCTCCCTAGACCATGCTGTAAGCTCACTCGTTCTCAATACTTGCATAATGGTTGGTGTTCACCTCTCCCGCCCAGCACCTTGGTTTTGGAAATACATCTTTATTTGTGTCTTCTCTGTAGGCAAGAACCGTGTGTGTGTATCTGTGAACCCACATGAGATGTTAGTAACTATTGAACCGTGGGCAAACCAAAACCGGGGAACTCACAGTGTAGAGTCCTGGATTTAACGTTTGGCTCTGTTGTCTTTGACACTCTCAGCGATTGCCTCTTCCCTCTGAACCTTCATTTTCCTATTTATAAAATGAAAAAATACCAATTAATAAGGATATGTGAGGGTTTAGAGATAATGGATAAAGAGTACCTAGAATAATATTTGGTGGATAATATTAAGTAGCAGCAGCTATAATTGTTCCAATCACTGATACTAATATTCCCAATGTTCTGGTTATTCCTTACTTAGACGTGTATATAACTCTTATTTTGCTATGAGCTGCCCTGTTTATGTTGGTTTACTGATATTGCTAAGGATATGCTCAAGTGTTACAGCAGAAAAATGAGAAACAATGATGTAGTCATCTAGCTGAAAATAGGGAAAATGAAAGGGAGTAAATCAGTATATTCTGGGGAAATTCTCAAGGAATTTTGGCCTTAAGTAACTGAAGTTTTGAATCTCTGTATAAATAAAAACTATATATAATGTAAGAGTAAACACAGAAAGCACAACCTTTTGAATGAGTGATCTCGTT EMBV3_32516 GGATGTGACCCACACTCGTGTTACTATAACTCTTCGTCGATTCACCTGCAAGCTCTCCAC Gene BVT0102_063867 + 0 NULL GK000001.2:150386587-150439866 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002652 TCONS_00002661 TCONS_00002653 TCONS_00002656 TCONS_00002660 TCONS_00002659 TCONS_00002654 TCONS_00002658 TCONS_00002655 1 XLOC_000657 Coding TCONS_00002656 XLOC_000657 Coding Coding CHAF1B 1:150360954-150388342 j TSS1350 2516 1 TCONS_00002656_1 565 0.0941971383147854 13 0.908606273049257 0.00110913818105993 0.00151594795901453 0.00114221392607358 0.000537449755771138 0.000939576635838269 0.000278207857465824 0.00094571462102534 0.000671535111058421 0.000756650022358529 0.000875983749105098 0.000371202051385568 0.000114813927790556 9.03420423381614e-05 0.00114128225971096 0.000457255549329161 0.00242526948454524 0.000646096478418695 0.00248307793909327 0.00180874113856892 0.000234159959777199 0.00107520184479622 0.000741195339206162 1.68736934539768e-10 0.000807806064125558 5.33688624912873e-15 0.000368877649401364 0.000225865785718865 0.000575936196809223 0.000352780151086307 0.00158816952114288 NM_001098014.1 CHAF1B Bos taurus chromatin assembly factor 1, subunit B (p60) (CHAF1B), 0.0 2904 98.03 0.653815580286168 NM_005441.2 CHAF1B Homo sapiens chromatin assembly factor 1, subunit B (p60) (CHAF1B), 0.0 1714 83.46 0.643481717011129 TCONS_00002656_1 sp|Q13112|CAF1B_HUMAN CAF1B_HUMAN Chromatin assembly factor 1 subunit B; 0.0 964 85.56 0.966371681415929 3 coding 0 0 0 0 -0.0950315542268018 0.60748438929844 -0.00501622805601505 0.917448790463677 CTCTCCTCCGTCTTTGGAGAACCAACGGGGGCACTCCCCACCACCCCCTGAGGAACTGTGTTTCGCTCCTTGAAGACCCCGGAGGATGAAAGTCATCACTTGCGAAATCGCCTGGCACAACAAGGAGCCGGTGTACAGCCTGGATTTCCAGTATGGAGCCGCCGGGAGGATCCACCGGCTGGCCTCCGCTGGGGTGGACACGGCTGTCAGGGTCTGGAAGGTAGAAAAAGGACCAGATGGAAAGGCCATCGTTGAATTTTTGTCCAATCTTGCTCGCCATACCAAAGCGGTCAATGTCGTACGTTTTTCTCCAAATGGGGAAATTTTAGCATCAGGAGGGGATGATGCTGTCATTCTGCTCTGGAAGGTGAATGATAACAAGGAGCCGGAACAGGTTGCTTTTCAGGACGAGGATGAGGCTCAGCTGAACAAGGAGAACTGGACTGTCGTAAAAACCCTGAGGGGCCACTTAGAAGACGTGTATGATATTTGCTGGGCAACTGACGGGAATTTAATGGCTTCTGCCTCTGTGGACAACACGGCCATCATGTGGGACGTTAGTAAAGGCCAGAAGATCTCAATTTTTAATGAACATAAAAGTTACGTACAAGGAGTAACCTGGGATCCTTTGGGTCAATATGTTGCTACCCTGAGCTGTGACAGGATCCTGAGGGTGTACAGCACGCAGAAGAAACGTGTGGCTTTTAACGTCTCAAAGATGCTGTCTGGAGTGGGGGCCGAAGGAGAGGCGAGAAGTTACCGGATGTTCCACGACGACAGCATGAAGTCGTTCTTCCGAAGACTGAGTTTCACTCCTGATGGATCTTTGCTCCTCACGCCAGCTGGGTGCGTGGAATCCGGTGAAAATGTGACAAACACGACTTACGTTTTCTCCAGGAAAAATCTTAAAAGGCCCATCGCCCACCTTCCGTGTCCTGCGAAGGCGACGCTCGCTGTCCGCTGCTGCCCCGTCTACTTTGAGCTCAGGCCGGTGGCAGAAGCAGAACCAGGCATGGAGCTGGTCAGCCTGCCGTACCGCCTGGTGTTCGCCGTCGCTTCCGAGGACTCGGTGCTTCTGTACGACACCCAGCAGCTGTTCCCGTTCGGTTACGTGTCCAACATCCATTACCACACCCTGAGTGATATTTCCTGGTCCAGCGATGGGGCCTTCCTGGCCATCTCTTCCACAGACGGTTATTGCTCCTTCGTGACGTTCGAGAAAGATGAGCTTGGAATCCCCCTGAAAGAGAAGCCGGTTCTGAGCCTGCGAACTCCCGATACAGCGAAGAAAACCAAGGGTCAGACCCCCTCTGGATCTTCGCCAGGACCCAGGCTTGGGGAAGGGACCCCCACCGGCAGAGTCCAGGACCCCAGCAGCCCTTCCACCACCCCTCCACAGGCGAAACAGTCTCAGGCCCCCCCGGCGGCCAAGGACACCCCCATGGCCGCTCTTGGTGCCAGAGGCTCCCCAGCAGGGCCTCCCAAGGAGAAGCCCCTGCAGCCCAGCGGTCAGAACGCCAAGGCCCAGCCGTCCCGGAGGGTCACCCTGAACACCCTGCAGGCCTGGAGCAAGCCCACATCCCGGAGAATAAACTTAATACCCTTAAAGACAGATTCTCCACTGAACTCCATATCAACCCCTTTAACTTCCAGCCCTTCCACAGAGGAAATTCAATCAGGCAGATTCTTCACCGCTGAGTCACCTGGGAACCTCCGTCCACAACCCAGTTATCAGGAAAAAGAGCCCGCCTCCCTCTCCACGGGAAAGAGGCAAAGGGGGTGATTTACAACGTGGAGAGCTTGCAGGTGAATCGACGAAGAGTTATAGTAACACGAGTGTGGGTCACATCCAATACAAAGATGTTTTGAGAGGTCGAAGAGCAGCTGTTTTGACCAGGGTTCCACCTTGAGGTCCCCCAAAGACCTGTCAGACGTCGATGGCCGGGTCCTGCGGCCCAAGTCTGGCCTTCTTGGTCTGGGGTGCCAGCCGAACCTCAGGATTCTTGAAGGCCCCTTTGGCGATCTGAGGCGCAGCCAGGATTGAGAAGTCAAGAGAGGGAAGCTTCCCCTGGAGGCAGTCTCTGCTGGTTAAATGCATCTGCATGGAAAGCTTTCTCTTGTTTCTCTGGTCCATCACTGAGGGACAGCAGCACTTCTATCCAAACCGAAAGGATAACAATGTGTGGGAGATGCCATCAGCTCTTCAGAGGAAAAATGACCTTAAATTTCCTGCAGCTAGGGACTTCCTTGGCGGTCTGATGGCTAAGACTCCGGCGTGCTTCCAATGCAGGGGCAGGGCACGGGTTCAACCTCTATTCGGGGAACTAAGATCACATGTGATAGGCAGCTCAGCCAAAAAATAAAAATATCCTGCAGCTGGAGCGACGTATCTTTTGTAGGGATTGGTCCCATGCAAACAGGAGTCACTGTGGGTCCTGCGTGCCTCGGTGAGCAGGTCTGCTTCTCTGACCACCCGCAGCAGAGGAGCGACAGCAGGAATGGGGAGGAGGCAGGGT EMBV3_39913 TCCAGTGGGATCTGGGTCAGAAGAAAGCAAAAGTGAGGGACCTTCGTGTCCTGATTCTCC Gene GeneID:522921|HBEGF:NM_001144090:244_cdna Constitutive 0 NULL GeneID:522921 7 GENE HBEGF DTR HB-EGF heparin-binding EGF-like growth factor EMBV3_34454 TACTTAGCTCTGAACTGGAAGATTGAGCAGAAACAGTGCTGTGCAAGCCGGAGCCTAAGC Gene GeneID:100337141|LOC100337141:XM_002698644:31_cdna Constitutive 0 NULL GeneID:100337141 27 GENE LOC100337141 NULL signal peptidase complex subunit 3-like EMBV3_04611 CAGGTCCTTCATGCACGTCAACACCAATGCCAACTTCTACAAGGACTCCGGGATCACCTA Gene GeneID:615432|DUSP3:NM_001076374:290_cdna Constitutive 1 NULL GeneID:615432 19 GENE DUSP3 MGC152292 dual specificity phosphatase 3 EMBV3_20595 CCTCTGTCCCTTTACCCTCACCATTAGCTTTCCAAGAGGAATCAGAAAGGCAGAAACGTG Gene BVT0102_144553 + 1 EMBV3_07831 GK000002.2:107556746-107564020 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25624 TTGCTGTACGAGCTTCCGATGAGACCCTCTACACTCAACCCGAGTAGCTTATTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_04290 GATAAAGAACAAGGTAATCAAGATGCTTCCTATCACCTGCTTCAGACTCTGAGGAGGCTG Gene GeneID:615352|FANCG:NM_001102287:65_cdna Constitutive 0 NULL GeneID:615352 8 GENE FANCG MGC159566 Fanconi anemia, complementation group G EMBV3_38452 GCATGCTAATTGACGAAGGTAGTTGACACTGGCTCCCTGCCACCAGACTGTGAGATGTTA Gene GeneID:509536|SLC38A10:NM_001105349:60_cdna Constitutive 0 NULL GeneID:509536 19 GENE SLC38A10 MGC159599 solute carrier family 38, member 10 EMBV3_20280 TTTTATGCCCCGGATTACCTGTGTTTGACCCTCGTGGCCGTAATTTTATTCCCTCCCCTG Gene GeneID:100297622|LOC100297622:XM_002694934:30_cdna Constitutive 0 NULL GeneID:100297622 18 GENE LOC100297622 NULL hypothetical protein LOC100297622 EMBV3_05897 CCCATGGTCCCAGCACCTGTCAAAGACCAAGTTCCTATAATCCCGGTGCCTCTGAAAGAT Gene GeneID:518794|MAP6:XM_002693462:43_cdna Constitutive 0 NULL GeneID:518794 15 GENE MAP6 NULL microtubule-associated protein 6 EMBV3_20762 TTTTGGCAGTGTGGACTATAGATTCCACAGGAGACTAGACGGCTCCTTTGACGTGAAGGT Variant GeneID:512242|LBP:NM_001038674:997_cdna 278^406 1 EMBV3_12948 GeneID:512242 13 GENE LBP MGC134541 lipopolysaccharide binding protein EMBV3_15634 ATAAATCACTGTCATTGCTACTGGTGACAAGTGTGGTTGAACGGGAAGAGGGGGACGACC Gene GeneID:513746|LOC513746:XR_084016:607_cdna Constitutive 0 NULL GeneID:513746 21 PSEUDO LOC513746 NULL similar to corticosteroid binding protein EMBV3_13750 GCCTAAGTTTACAGGACTTTTCAGAGTCTTACAATTACTTGTGCACCCCAGAAGATGAAC Gene GeneID:521442|SPAST:NM_001081591:26_cdna Constitutive 2 NULL GeneID:521442 11 GENE SPAST MGC143109 SPG4 spastin EMBV3_02217 TGCTTATGTGGACGCAGCAGGGCTTATTCCTTCAGAAACTCTGGACCCACAGGACCTAGA Gene GeneID:535236|MLST8:NM_001035411:243_cdna Constitutive 0 NULL GeneID:535236 25 GENE MLST8 GBL MGC139583 MTOR associated protein, LST8 homolog (S. cerevisiae) EMBV3_21504 TCAAGTGCTGGAAGCCTCGACCCTTATCCAGTGCCATCTGCCTCATCCAAGAAATAGCCT Variant GeneID:513111|LOC513111:NM_001098021:167_cdna 612^896 2 EMBV3_20534 GeneID:513111 25 GENE LOC513111 NULL hypothetical LOC513111 EMBV3_31947 CTGCTCTAAGTTTTGGCCGCACTTTGGATTCTGATTATCCCCCCTTGCAGCAGTTCTTCG Gene GeneID:100336655|LOC100336655:XM_002698901:72_cdna Constitutive 0 NULL GeneID:100336655 28 GENE LOC100336655 NULL RUN and FYVE domain containing 3-like EMBV3_33647 ACTGTTGTTTTCTGTGAAAAGTTTTCTACTTTACATCTAACTGACATAAAGTTATCTTTG Gene BVV0102_197412 + 1 EMBV3_19761 GK000011.2:95649616-95709410 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01716 GCAGAATCTCAGGGGGAAGCTGGCCTTGGGGAAATCTACCATTGTCGAAGACAAATAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37181 ACCAGAGATTAAAGCCAGACTGTCAGCAGTGGAAGCATGGAGTCCTAACCACTGGACTGC Gene BVV0102_153289 - 0 NULL GK000005.2:68127879-68192523 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36563 ACCTCCTTCCTGGACACCCGATTCTGAGGGTAGGTCCCACTTCTGAGGGTACCACGGATT Gene GeneID:520599|TBC1D10C:NM_001102060:36_cdna Constitutive 0 NULL GeneID:520599 29 GENE TBC1D10C MGC152584 TBC1 domain family, member 10C EMBV3_04474 CTTCAGTGATATACTTGGTAGATATTTCAAGCCTTTTCTGTCTCTTACACAATGGTGCTC Gene BVV0101_070641 + 0 NULL GK000001.2:88259659-88262568 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004493 TCONS_00001486 TCONS_00001490 TCONS_00001488 TCONS_00004495 TCONS_00004494 TCONS_00001489 TCONS_00004496 TCONS_00004497 TCONS_00001487 2 XLOC_001048 XLOC_000369 Coding TCONS_00004497 XLOC_001048 Coding Coding MFN1 1:88259761-88389981 = TSS2241 7270 1 TCONS_00004497_3 742 0.0236588720770289 18 0.944309202190157 0.000351612149537776 0.000608164901680895 0.000371918248689544 7.29940610493371e-08 2.80512929944906e-07 1.39817824995189e-07 1.21839088370982e-07 0.000679707456718127 0.000950486498774274 6.86821857637695e-43 6.02825150670332e-11 7.48888747277188e-15 1.55346706776004e-08 3.5162682751516e-08 1.47401271134288e-07 0.00209172834454088 9.67281723298081e-17 2.0367216788025e-13 9.69104102587395e-08 1.62853617951721e-08 9.60420477527873e-09 0.00257777124152557 1.16567145925594e-08 0.00316402885886104 1.5417458024004e-09 0.000533389172889476 2.65270243938599e-07 2.02634656388587e-08 5.9404271305158e-05 2.17775463329338e-07 NM_001206508.1 MFN1 Bos taurus mitofusin 1 (MFN1), mRNA. 0.0 5791 99.91 0.442640990371389 NM_033540.2 MFN1 Homo sapiens mitofusin 1 (MFN1), mRNA. 0.0 3878 86.17 0.451581843191197 TCONS_00004497_3 sp|Q811U4|MFN1_MOUSE MFN1_MOUSE Mitofusin-1; 0.0 1469 94.05 0.995956873315364 3 coding 0 0 0 0 -0.023245623196122 0.874367222607614 0.0148460873726063 0.796045479628847 GGGCAAGAGACCGGAAGTAACCGCCCTCGTGCCTCTCCTCCCGCCCCCTCTTAGTTTCCCAGCGTCTTTTGGGAGAATGAGGTTGCTTGAGGGCTGTGGCTGAGGTGCGGTTACTGGGTGACAAGTCGGAGCCCGGACTGGCATAATGGCAGAAACTGCTTCTCCACTGAAGCACTTCGTGCTGGCTAAGAAGACAATTACAGCAATCTTCGACCAGTTACTGGAGTTTGTTACTGAAGGATCACATTTTGTTGAAGCAACATATAAGAATCCAGAGCTTGACCGAGTAGCTACGGAGGATGATCTGATAGAAATACAGAGGTATAAAAACAAGCTTTCCGTCATTGGTGAGGTGCTGTCTCGGAGACACATGAAAGTGGCCTTTTTTGGCAGGACAAGCAGTGGGAAGAGCTCTGTTATCAATGCCATGTTGTGGGATAAAGTCCTCCCTAGTGGGATTGGCCATACAACCAATTGCTTCCTGAGTGTTGAAGGAACCGATGGAGATAAAGCCTATCTCATGACAGAAGGGTCAGATGAAAAAAGGAGTGTAAAGACAGTTAATCAGCTGGCCCACGCCCTTCATATGGACAAAGACTTGAAAGCTGGGTGTCTTGTGCATGTGTTTTGGCCAAAGGCAAAATGTGCCCTCTTGAGAGATGACCTGGTTTTAGTAGACAGTCCGGGCACAGATGTCACTACAGAGCTGGATAGCTGGATTGATAAGTTTTGCTTAGATGCTGATGTCTTCGTTTTGGTTGCAAATTCCGAATCAACTCTAATGAACACGGAAAAACAGTTTTTTCACAAGGTAAATGAGCGACTTTCCAAGCCTAATATTTTTATCCTGAATAATCGTTGGGATGCCTCTGCATCAGAGCCAGAATATATGGAAGATGTACGCAGACAGCACATGGAAAGATGCCTGCATTTTTTGGTGGAGGAGCTCAGAGTTGTGGATCCTTTAGAAGCACGCAATCGTATCTTTTTTGTTTCTGCAAAGGAAGTTCTTAGTGCTAGAAAGCACAAAGCACAGGGGATGCCAGAAGGTGGTGGGGCACTTGCAGAAGGATTTCAGGCAAGATTACAAGAGTTTCAGAATTTTGAACAAATCTTTGAGGAGTGTATCTCGCAGTCAGCAGTGAAAACAAAGTTTGAACAGCACACTATCAGAGCTAAACAGATACTAGAAACTGTGAAAAACATAATGGATTCAATAAACGTGGCAGCAGCAGAGAAAAGGGTTTATTCAATAGAAGAGAGGGAAGACCAAATTGATAGACTGGACTTTATCCGAAACCAGATGAACCTTTTAACACTGGATGTTAAAAAAAAAATCAGGGAGGTTACAGAGGAGGTTGCAAATAAGGTTTCATGTGCAATGACAGATGAAATTTGTCGACTCTCTGTTTTGGTTGATGAATTTTGTTCTGAGTTTCATCCTACTCCAAGTGTACTGAAAGTATATAAAAATGAGTTAAATAAGCACATAGAAGACGGAATGGGAAGAAATTTGGCTGATCGGTGCACCAATGAAGTCAACGCTTCAATGCTTCAATCCCAGCAAGAAATTATTGAAAATTTGAAGCCATTACTTCCAGCTGGTATTCAGAATAAACTACACACACTGGTTCCTTGCAAGAAATTTGATCTTAGCTATGATCTAAATTGCCACAAGTTATGTTCAGATTTTCAAGAGGATATTGTATTTCGTTTTTCTCTGGGCTGGGCTTCTCTTGTCCATCGTTTCTTGGGCCCTACAAATGCTCAGCGGGTGCTTCTAGGATTATCGGAGCCTATCTTTCAGCTCCCCAGATCTTTAGCTTCTACTCCCACTGCTCCTTCCAACCCAGCAACACCAGATAATGCATCACAGGAAGAACTCATGGTTACCCTAATAACAACATTAGCCTCTCTTACATCTAGAACGTCTATGGGCATCATTGTTGTTGGAGGAGTGATTTGGAAAACTGTAGGTTGGAAACTCATATCTGTTTCATTAAGTATGTATGGAGCTTTGTATCTTTATGAAAGGCTCACTTGGACCACCCGTGCCAAGGAGAGAGCCTTTAAACAGCAGTTTGTGAATTATGCAACTGAAAAACTGCAGATGATTGTTAGCTTCACAAGCGCAAACTGCAGCCATCAAGTACAACAGGAAATGGCAACCACTTTTGCTCGCCTGTGCCAACAAGTTGATATTACACAAAGACATCTGGAAGAAGAAATTGCTAGATTATCCAAAGAAATAGATCAATTGGAGAAAATACAAAACAATTCAAAGCTCTTAAGAAATAAAGCTGTTCAACTTGAAAACCAGCTGGAGAATTTTACTAAGCGGTTTCTACATTCAAGCAGAGAAGAAGAATCTTAACAATAGAGATTGCTTTGGTGATCATCATAGGAGAAAATGGAGTTTGGAAGATTTGGACGGTTATTTTTATGAAGTGATTTTAAGTATGAATTATACTAACTATACCTAAATACCAATTCCTTGAGTAGATCCCGGTATTGATCTATCTCAGGGTGTTTGCACTTCTGAAGAATGTTATGGTGTCTCTTTAATTTTGGGTAAAGAAAATTCCTTTGATATATGAAAATGATGAATTAGTTTAAAGCAAAAGAAACAACTCTGTGACCCCTGAGGGGTGGGGCCTTGCTCTTAATTAGGGCTCTCTGTTTTTGATTCTGAAAAACTCTGCTTCCTGGCATCCAGGAGTTAGAGAATGCTCCTTTCACCTTCTTTCTCAAAACTAATTTTTGATGCCGACTTTAATGGGAATAATCATATTTTTGTTTTATAAACTATATTGCTGTAACCACAAAGGAGTGCGGAATGTTCTTGAGTGTATTATTTATGCAGGTTACAATCACTTTTGCCATCCTGACAGGTATGTAAACCACTAATAAATAACGCTGTTTTTACTTTTATTCCCATTGAAACTGATGTAAAGCAGTGTATAGGTTTGTTATTAGAAAGTCCTTTATGAAAGTATTTGGGTCTAAATAGTCTGCTCATGTTTCTCAAGAAACAAGTTCAGTCTCAGCTGTTGATTCCAGTAAGGAAAGCTTTCTGTTTTAAGAGTTAAGTTTGAAGTGATAAAAATAGCCAAAGAGATGGAAGATCTGAATTTTGGGTGGCTACAGTCAAAAATGCTGTTCTTCGAAAAGTATTTGCCAAGGATACTGCTGGGCTGTCCCCCACGGTGACTTTTTATGTTATTTAATTGTATGAATTTGACAGGGCACGGTTAAAAATTTTATTTTTTACCTTAATGAAAATGTTTGAGTTAAAATATTGTGTTTGTTTCTGTGTTAAAAAAAAAAAAAAAAAACTAATAGAAACATATATGGAAACATTAAAAACTGGTCTAAGGCTTTGCTATGCAAAACTAGTTTTGAGGACCACTGAATCAGCATCACCAAGTGCATGTTAGGAATCCACAATCCCAGAAGACACAGTGCATTTGGCTGGTAGAGTTGATGCTCTTCCACGGGAGGGATAATGTTTCAGGCTTTTTTTCTTCTTTTAATACTTAGTACTTTTTCTGTACGTTTAAGTCTCTTGGATGCTATTCAGTCTTCACAACAGGTGCAACACTTTTTCAGGTTATTTTAAGGAGAAAATAAAATTATTTAGGCCATAGAAGCCTTTAATGTTTGTTTATGCAAATCAGATACTAGAATGCAATATTCAAATCCAGATATTCATTTATAGCTAACATTGTGGCTTTATAACCAAAAAACTATACAAGTCACCAAGAAGTGGGACTAAGTAACAACTGCAACAGAACAAACTGATGTTTAAGATTGGGTACTGCTAATTAAGGTTACAAGTTGAAGGCCTTAATCTTTATACACAAGTACTTGAAACTTCTGAAATAGTATAGTGGTTTGGTATTATCCCATGAGTGCTAAGTACAGTGGCTCTCACAGTTCAGTCCCTCAATCAACAGTATCACTAGTCAAGTTGTAAGAATTATTCTTGGGGCTCATCCCAGACCTACTGAATCAAATACTAGGTTTGGGCACCAGCAGTTTCTGGTTTAACAAGCCCTCAAGGTGATCCTTGATGCATGCCAAAATTTGGGAACTGTGGAATAGTGGTTCTGCTGTAGTAAGTTTATACTAAATTTTCCATTAGTAGCTTGAATCCAGTTCTGCCTGATCAAGTTTGAAAATATATGAATGTTGGAAGTGGGACACTAAAATAATGAAGCCCACCTTTATGCTTGTGGTAAGTGCACCTATGACCAAGCCCACGAATGATCAAGAATTGTGATTTATGGCCGATGTTCAAGTTTCTGCACATTGACTTGTCTACTATGTGTGTTTGCAGGATTATTTATAAACTTTGTATAACCTTTAGCTTTTTACAAATCTAGACTTTTTATAATATGCAAGGTGAAAATAAAACTTGTTTGCCTGAAAGTTGATAAATAGAACATTTATACTGGCATTTAGTGAGTGTTAATCTTTTATTTTTGAAGATTTTTACGGCAAGCATATAAGCTATCTTGGGAAAACTGGCTCATTTTTATCATAAGGGAGCTTTAAGGGAAGAATGACTTAAATTTTGCTTTCTAATGAAAATCTGTGGCCTTTTAACAGTAGGCCAGCATTCACAGTACTTACTATAGGATAGGTCATTGGACCTCCAATCTCTTCCTTGCTTCTGGCAGCCCATGCGTTTTTCACGATGAGAATGCTTAGAGAATCAGAGCTGAGCATGAACTGCTGGGCTTGGAGTTTAATTCTGAGACTTAAAAAAGTAATCCTACTAAAAACTGATTTAAAACATGCTACATGAAATCTGGTTAAAAGCACTTTATTGATTACAATATCAATTCACAGCAACATTATTTCACAGAGCTACTATACAAATAAAGGAATGAATTACTGCAAGAATGATTCAAGAATACTGTTAAGTCATGATACAAGTACATAGTTTGGTTTAAAGCTTTTTTCTAAGAGCTTTAATCTAATACATTCACCTTTCCCACACACTACTGACATTCAGGTTCAGTTGGCCACAAGTGTTGTAGAAGCCACTCTAGGTGAAGAAAAACATTTTAATCAGCTTAAAAAACCCATTTAGATGTGAATGCCTTTGGATAAGAATATGCAAATGCAAGTGTTCAGATGCTTCTTTGAGAAGAGAAAACAATAGGATAGAGCACCATTGTGTAAGAGACAGAAAAGGCTTGAAATATCTACCAAGTATATCACTGAAGTTATATTAATTAAAAAATACTGTATGATGTAAGATTTTGTCGGGCACACTTAACATCAATTGAAACTAAAATTTAACCAGTTTTTCCATATGCTGCATTAGTCAATTATTTTATAGGCTCAATACTGGTTTTAAGAAAAAAGACTTAGGAAATTTTATCAACATGCAAACAAATTTGCTAAACACAAGTTGTACCATCATTCTGATTAATAAATTACTTTTTAAACAATGCTAGCTTAGACATTCAACTACAGACCATTTTATTGAGTACCTATTATAACCAATACTTTTAAATATAGCACTGAATTTAAGGCAACTTACAATGAACAATGGGAGTAGTAAATATGAAGGGTGCATCACATTCTGTTTAGTCTAATTTAAAATACCAATATTATCCACTGTGCTATCATTTCTCACAAGATAGTCTGGTGGGTGTTTTCAAAATTCAAATGAGGTAAGAAATAGTTTAAAATTTTGCTTTCCACGATGGCAAAAGGGAAATTAGAAACTGAACATAATAATTTGAAAATGTTTTTAAGCCTAACTCACACCCTAAAGATTTTAGAAAGAATCTATTACTAAAATCATGGGCCTGTTTGGGAGATTGTTTTTAATCAGTTTCCATTACATTTAAACACATCAACAGGTAAGCCACAAGTATTCGACTGTTATAATTTAAACTGTGAGACACTCACCAATAAGCATAAATTTCCCTGAACATCTTCATTTTTAAAACAGAATGTAATTTCTAAATCTAAAACATCAAGTGTTGGAGAAGGTTAGTTATATATGTATTTTTTAGCAACTTCAAAAATTTCATTTTGTCACCTGAAGAAGCCGAGGTTTATTTCTCTTTCAATAGGTTAACTTTAAAATTACTTAACATATTTCAGAAGCACCTACTTCTGTTATGTCTAAGAGACTAATTTACTATCATCATGCAGTATTAATCAGTTCAGATGAGTCTAAATTAAGGAGACGGCCTACCAGGTAAGCCCTCTTGCAGAATTAAGAAGTATAAGTATCTCTTGATACTTAAGTGTCTCTTGGATATTAAGCCTAAATCTTTGCCTCTCTAAAGATGGAACTCAATATGCTGTTGTAACCATGGATTTACAACTATAGAAATTTGAGCTAGGGAAGAAACTTGAATATTTAATCTAAAGCTCTAATAGCACAGCTGTCAAAAATGAGGCCGGTCCATCAAAGTGGAGGCAGTGTCCTTAGTGACAGCATGAAGTGCTTTTTTTGAGGTTTATGGGTTGATTTGCTGAACACAAGGCCATCACCCCACTTTTAGAAAAGAATATTTGCCTTTAAAATACTGCCATATCTTAAGTGTTCTTTATGCAATGATTAAAGAATTTACAAATAAACCCAACTGAGGCACATTATGTTTAAATGTTTCTTAGGTAAAAAGAAAAAAAAATCAGGCACCAGAACTGCAATATTGATGCAAATTCCTTAAACTACATTTGGCCTCTTTTAAGTTTGGAAAAACTAAGATTCAAGCTGTACTGTGCATCTACAAAATATACCAATTTCAGGAAGTTTTAAATATACAATCAGATGAACTCAGACTGCAAGTACACAAATTTAGCAAGTGGGACCCATATCACTAGATAACAAAAGTTTTAACCTGTAAGTTAATTAATATGGTATCACCATTTGGTCATATGTATAATCAGCCATGATAGTGGTTAATTTTCAGTTGCCTAGTACATGTTTAATTATGATAACTGCCTTTTAACCACCTACAAAAAGTTTAATAATATTAAATCATTTTTATCAACATGTTTAAGACCACAGAATTCTTAAAGTCTGTGCCTCTAAATTATCTTGTTACTAGAATCATTTTCAAACTAGTGGCGATACTATTCATATATATAAGGCAATTTTGCACATGCTACAAGTGCTTGCTTCAACAGGATTTTGGAATAAATTGCTGAACTACATGGTAATCCTCACTCCTATTTTTGGAAATGACTGTCCCTTAAAAATTGTCTTGCCTTATCTCAAAGAGCTGCTCTTTATATC EMBV3_26403 TGAATGGATCATCTCACCCAAGTCCTTCGACGCCTACTACTGCTCGGGAGCCTGTGAGTT Gene GeneID:539510|GDF10:NM_001076167:32_cdna UTR3_Alt 2 NULL GeneID:539510 28 GENE GDF10 MGC140700 growth differentiation factor 10 EMBV3_37719 CTGGACGAGTGGTATGCGAGGCAGGATGAGCAGCAAGCAGGCCAAAGATGTCTCCCGCAT Variant GeneID:281078|CLTA:NM_174022:8_cdna 544^758 7 EMBV3_01165 GeneID:281078 8 GENE CLTA CLTA2 MGC140767 clathrin, light chain (Lca) EMBV3_30683 ATGAGGAGGACCGCGTGCTCATCCATTTCAACGTCCGCGACATAAAGATCGGCCAAGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14266 TCTGAGTGCACAGACAGCCCGGCCTCATTACCAGAGTATGGAGAAGTCATAGTCCATCTG Gene BVT0102_002066 - 1 EMBV3_02378 GK000026.2:20777488-20829319 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42595 GGAGTTTGACTGTATCTGGCAGAGTGTCTTTGAATTTGTTTTGCTCGGAGTTCGGTGAGC Gene BVV0101_060810 + 0 NULL GK000012.2:33648611-34141657 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28588 CGGGGAGAGACCCCTTCCTGGAGCCTGCTTGACTTAAATGATGACTTCACTCCCTTTGAT Gene GeneID:614416|LOC614416:XM_002698525:149_cdna Constitutive 0 NULL GeneID:614416 26 GENE LOC614416 NULL similar to Chondroitin sulfate proteoglycan 5 (neuroglycan C) EMBV3_02324 CAGAACAGAGGAACTTGGTGGGCTGCAGTCCATAGGGCCACAAAGAATGAGATCCAACTT Gene BVT0102_248907 + 0 NULL GK000008.2:94938602-95320834 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01296 TACCTGCTCAGCCCACTTCATGGTGGTTGCCCTCTTCTTTGGGCCATGTATCTTCCTCTA Gene GeneID:513435|LOC513435:XM_002690648:180_cdna Constitutive 0 NULL GeneID:513435 10 GENE LOC513435 NULL similar to olfactory receptor Olr1643 EMBV3_36918 GGGCTCTTGAACCGCTACTTGAATTAACCGTAGGCGCTGCTTGTAGAGTCCACTTGTTAT Gene GeneID:613652|UBAC1:NM_001076281:193_cdna Constitutive 0 NULL GeneID:613652 11 GENE UBAC1 MGC143416 UBA domain containing 1 EMBV3_35392 CACAGAGAGGAGTCTGTGCGCAAGTTCACAGGGAAGGTGGCCCCAGCCGACGTCCTAGAT Gene GeneID:511836|HAGHL:NM_001075540:138_cdna Constitutive 0 NULL GeneID:511836 25 GENE HAGHL MGC142973 hydroxyacylglutathione hydrolase-like EMBV3_11325 CAAACATGGTGGACCTGTGCCCTAAAGTTCCTAAACAGGATAATAGCAGTGATTGTGGTG Gene GeneID:507820|SENP7:NM_001101888:8_cdna UTR3_Alt 2 NULL GeneID:507820 1 GENE SENP7 MGC152178 SUMO1/sentrin specific peptidase 7 EMBV3_15441 CTGAGAAAGCGGTTGTGTCTTCAGTGGCCACAGGCAGCTCCCCTGGCGTGATCCTGACGA Gene GeneID:506648|SLC47A2:XM_002695820:182_cdna Constitutive 0 NULL GeneID:506648 19 GENE SLC47A2 NULL solute carrier family 47, member 2 EMBV3_26624 GAAAGTCCAACGGGGAGGGGATATATATGTCCATAGAGCTGACTCCTTCGTGTACAGCAG Gene GeneID:504826|NUDT7:NM_001109788:8_cdna Constitutive 1 NULL GeneID:504826 18 GENE NUDT7 MGC166186 nudix (nucleoside diphosphate linked moiety X)-type motif 7 EMBV3_42990 GGTGCATCTCTGCGTGACCTGGAGAAGACGATAGAGAAGGATTACATTGATTACATCCAG Gene GeneID:533660|DNAJC18:NM_001015649:5_cdna UTR3_Alt 2 NULL GeneID:533660 7 GENE DNAJC18 MGC129069 DnaJ (Hsp40) homolog, subfamily C, member 18 EMBV3_02675 TGGCCAAGAGGGCGACAAGTTCAAGCTGAGTAAGGGGGAGATGAAGGAACTTCTGCACAA Gene GeneID:509860|S100A2:NM_001034367:117_cdna Constitutive 0 NULL GeneID:509860 3 GENE S100A2 MGC127936 S100 calcium binding protein A2 EMBV3_06039 TATCATAACTGCTCTTCCTACTATTTATCAGATGAGTAGTATGTCAGCACTCTTTCAGCT Variant GeneID:509037|TMX1:NM_001075385:40_cdna 326^454 3 EMBV3_37358 GeneID:509037 10 GENE TMX1 TXNDC1 thioredoxin-related transmembrane protein 1 EMBV3_29909 GCCACCATTTTTAAGAGAATTGAATAGACCTGTTGCAAGAGGGTTCTGACGAATCAATCC Gene GeneID:507151|RPL15:NM_001077866:2_cdna Constitutive 1 NULL GeneID:507151 27 GENE RPL15 NULL ribosomal protein L15 EMBV3_26965 GCATCACCTCTTCAGAACACAAGGAATTTGGAGGCACTGATGTCATGGGCAAGCATGTTC Gene BVT0101_057564 + 0 NULL GK000022.2:28904486-28952975 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21538 GGTACATAGGCTTCTATTACCTATTAGGTGGAGATTTTATATGTAAATGTGTTAGCACTG Gene GeneID:100138017|PTPRA:XM_002692389:308_cdna Constitutive 1 NULL GeneID:100138017 13 GENE PTPRA NULL protein tyrosine phosphatase, receptor type, A EMBV3_15662 ATCTCAGGATGTGAACCTTTGCTCTGATTTAAGAGGCTTTCCTGCCAAAGTCATGGCCAG Gene BVV0101_060632 + 0 NULL GK000005.2:85615476-86571272 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00334 TCCCGCGCCCCGCCATGCCGCTCTACTCCGGGAATGACTGTACTAATGATGGGGTCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14804 CAAGACTCTGGATTGGTCAGTTGGCATTTGAAAGGTACGCTCCCCAGCGAGTTGTATGCT Gene BVV0102_261939 + 0 NULL GK000010.2:8698220-8737156 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16535 ATGAGTCCCAGCCATGTGCAAAGCCACGATTAAAACACGAACGGGCAAGCTGGATGAGCA Gene BVT0101_016786 - 1 EMBV3_17823 GK000009.2:23388200-23400883 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05243 CTCCAAACTACTCTCCACCAGCGCCAAGAGCGCTGGCCCCAAAGGCGACAACATCTACGA Variant GeneID:615599|UBE2E1:XM_002698757:22_cdna 612^662 1 EMBV3_31702 GeneID:615599 27 GENE UBE2E1 NULL ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast) EMBV3_33960 TGCTCGCAGACCCCATCTCAGCCTAACCACAGAGGAGCATCTGGACTTTCTGGACAGGAT Gene GeneID:512943|MAPK12:NM_001098953:34_cdna Constitutive 0 NULL GeneID:512943 5 GENE MAPK12 MGC160082 mitogen-activated protein kinase 12 EMBV3_01664 AGACCACTTGATCTGGTCCGTGTTCAGCACCCTCTACCTGAACCTGTGCTGTCTCGGCTT Gene GeneID:526461|IFITM5:NM_001081724:3_cdna Constitutive 0 NULL GeneID:526461 11 GENE IFITM5 NULL interferon induced transmembrane protein 5 EMBV3_16948 CGTGTGTGGCACCAGCTGGTGACGGACCTGGCTGGACAAAAGCGTTTTTAGAATGGTAAT Gene GeneID:513454|PDDC1:NM_001046147:275_cdna Constitutive 2 NULL GeneID:513454 29 GENE PDDC1 MGC138028 Parkinson disease 7 domain containing 1 EMBV3_08369 CAAGCATGAGGCCAAGAGGAGGCGAACAGAGAGAGTTAGGCGAGAGAAGATAAATTCTAC Gene GeneID:614339|LOC614339:NM_001078045:418_cdna Constitutive 0 NULL GeneID:614339 18 GENE LOC614339 NULL hypothetical protein LOC614339 EMBV3_15620 TCCTAGAGGGGATGACTTCACCACCATTAGTCCTCTTCCTCCTCCCTGCCATGGCGTATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29924 GGGCCCATACACACAGACAAATCCCCCTGCCCCAAAGAACTGCTAAGGACTACTCAAAAG Gene BVV0102_064626 + 0 NULL GK000003.2:34405908-34418711 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176863 1 XLOC_106637 Coding TCONS_00176863 XLOC_106637 Coding Coding - 3:34406165-34407409 - TSS131622 1244 2 TCONS_00176863_2 56 0.163987138263666 1 0 2.18741040564481e-05 0 7.43890487543851e-05 8.01044000669299e-05 1.19063764331119e-05 0 2.34393170202726e-05 0.000128374054822497 1.90276264151202e-05 0 0 0 0 0 2.366333018081e-05 0 0 0 0 0 0.000136656647198103 0.000155094465049956 0 2.69527872008054e-05 0.000289614268158963 0.000373795070503996 6.12291245052949e-05 2.31636459065516e-05 3.9024194438105e-06 0 XM_005226615.1 CXCL12 PREDICTED: Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), 5e-63 246 90.50 0.143086816720257 0 coding 0 0 0 0 0.0460151310828585 0.758073824991123 -0.0467094227970493 0.527902080856679 GTGTTTGAAAAGGTAAAGTGAAAGAAACTGAAGTTGTGTCCGTCTCTTTGCGACCCTATGGACTGTAGCCTACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCGAGAGTACTGAAGTGGGTTGCCATTTCCTTCTCCAGGGCATCCTCCCGACCCAGGGATCGAACCCGGGTCTCAGGCATTGCAGGCAGACGCTTTACCGTCTGAGCCGGAAAAGGTAAAGGCTTGCAGTTTTGCACTTTATTTTTCGCTGTGGCAGCTGCTCTGGTTGTGTGTGTGCAGCAGCCCCCCTGCAATGGAGAAGTCTCTCAAGCTTCCACGTAAGAGAACGCAGACAACTGGGGTCCTGAGGCGACGCCTGCAGCCTCTGGGACAGCGCTTGCTGCGCGGATCGTTCTTACTCCGTATGGAAATCTGGATAATGAGGCTGCATCTGAACTTTCAAATGAAATTAGGAACCTTATAACAAAAACAAGTTGCGTATTTCATGTGCTAAAGCTCCACGTTGTCGGGAAACGTTTTGGTAATTGCCAGTTTGTATGAATTTTTCTTTAAAATGTCAGGATGGTCTCGGTTATCTCCCGTATTTAGATAAAGTGGGGCCGTCTCGGCCACTTTAGCCAGGAAACGGCGATATTGGGGTAGCCTTTCTCACATTTTCACAACTTGACGAAAAACACCTTCAGTTTAACGGTGGCGCAGAACGGAGGAGACAAAGCTACAGATCCCGTTTCTGCATTGAAATCCTTAATTCCACACAACTCGATCTTCTTTATTAGAGCCAGGGCGAAAGTGCGACTGAATCATTCGAGGTTGAAACTGTAAGGTTACAGCTGGTCCGCGGTTGTCAAAGTCCTGAAGGGACCCTCTGCCCCTCTTGCTGCAGTGCCATCTGGTGGCGGCGACCTGCTTGGTTACGCCGAAGAAAAGGTACCAAAGCCTCCTAGGAGCTGGAGTAGAGGGGCAAATCAAAAAAGGCCTGTTGGAGGACAGACTTCTTGTGAAAATGTGCTTAAACGGAGAACAAAAAACGAAGACGACATACAGAACAAATAAGACAAAGCAAATGATTTTGTGCCCATACACACAGACAAATCCCCCTGCCCCAAAGAACTGCTAAGGACTACTCAAAAGCAAAACAAAACCGAAAAGTCCCTAATTGTCTTGGCCTTTGAACTTTTCATCAACAGTTATCTAAAACAGTATCAGCACCATCATCACTGGCCACGAACTGTTAGTTCCCT TCONS_00173008 . 5' 192 TCONS_00173008 . 5' 192 EMBV3_25245 GGCTGGCAAAGGTTTCCCGCGCCCTAGCTTAGGTCCCATCCGACAAGATCAAAGCTGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32095 AAGAGCTGATCCACTGGCTGTATAACGTTGCAGACACTACTGACCACCTCACTGCACCCA Gene GeneID:540684|CEP68:XM_002691446:145_cdna Constitutive 0 NULL GeneID:540684 11 GENE CEP68 NULL centrosomal protein 68kDa EMBV3_18435 TTATAGGAACAATGGTTGTAAATGCAGAAGATAAGGAATATCTTCTGATCGTCATTCAGA Variant GeneID:768062|DYNLRB2:NM_001077119:80_cdna 141^308 1 EMBV3_12910 GeneID:768062 18 GENE DYNLRB2 MGC133479 dynein, light chain, roadblock-type 2 EMBV3_21959 GTAAGAGAGAGACCAAGAACTTGCCCGACTTTAGAAATACACTAACGTGCAGTTGTTGCC Gene GeneID:508404|KIF3B:NM_001110788:952_cdna Constitutive 2 NULL GeneID:508404 13 GENE KIF3B NULL kinesin family member 3B EMBV3_24172 TTGCTGGCGATTCTTGGGTGTGAAAGGGCTGTGGCTTTTGTGCAGCGACTATGTTGGTGT Gene BVT0102_074402 + 0 NULL GK000025.2:3964311-3965952 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146079 TCONS_00144377 TCONS_00144382 TCONS_00144379 TCONS_00144381 TCONS_00144378 2 XLOC_089013 XLOC_088547 Coding TCONS_00144382 XLOC_088547 Coding Coding UBN1 25:3944556-3965816 j TSS108420 4596 1 TCONS_00144382_6 678 12 0.784373677030905 0.00010058405496699 0.000801497327304305 7.00428404910272e-05 0.000169618425478659 0.000108946310849888 0.000752813148788126 0.000608595020495005 3.31134876698904e-05 0.000282278183912909 0.0016527631292231 0.000138887286907603 0.000640923257088032 0.000172698753703979 0.000802941139821123 0.000259548980592522 0.00256110781564183 6.08048703737221e-49 0.00139427532459825 0.000202000265709098 9.11369990096698e-05 0.000262670634361312 0.000879161495349676 0.00107753944528243 0.00122813510555445 0.000449480594366389 0.0003059066274211 0.000409143686807943 0.000750839091154897 0.00045420157752211 0.000933060740943994 XM_005224483.1 UBN1 PREDICTED: Bos taurus ubinuclein 1 (UBN1), transcript variant X1, 0.0 7707 100.00 0.929503916449086 NM_016936.3 UBN1 Homo sapiens ubinuclein 1 (UBN1), transcript variant 1, mRNA. 0.0 2917 78.79 0.734116623150566 TCONS_00144382_6 sp|Q9NPG3|UBN1_HUMAN UBN1_HUMAN Ubinuclein-1; 0.0 947 79.21 0.998525073746313 1 coding 1 1 1 1 -0.111772677537734 0.398238735099194 0.0175081011524274 0.808782881603242 GTGTGTGGCAGAGGCCAGTCATTCCTTAGAGGAAAGTTAAAGTGGCTCTGTATGCGTCTCTGCTTCTACCACAGGGGGTGTCCTAGTCTAATAACTGAGAATCATTATTGCATTTTCTTGGGAAGGATGGACAAGTCTGGTGGAAACAAAGCGGCGTCATGTGGAACAGCGTTGGGTCGTGATGTGAGAAAACCTTACTTTGTGGAGTCCGTCAGGTGGACGCCGAGCAGGCTCTCCTTCCTCAGGAATTGCCGAGTCTCGGTCGTCTTTCAGGCGTGATGGAGACAGGTCAGGAGCCCATAGGCTGCAAGAGCTGCGGAGGGAGAGAGCAGGCAGAAGTTCTTCACCCACGATGTTAACGGCATCCTCCTAGACATAGAGGCGCAGACCCGGGAGCTGAGCAGCCAGACCCGTTCTGGAGTGTATGCCTACCTTGCTTCCTTCCTGCCCTGCAGCAAAGACACCTTGGTCAAGCGCGCGCGAAAACTGCACCTCTGTGAGCAGGGTGGGCGTCTGAAGGAGCCGCTCCAGAAACTTAAGGAAGCCATCGGCAGGGCCATGCCCGAGCAGATGGCCAAGTACCAGGACGAGTGCCAGGCCCACACGCAAGCCAAGGTCGCCAAGATGCTGGAAGAGGAGAAAGACAAGGAGCAGAGAGAACGGGTCTGTTCTGATGAGGAGGAAGATGAAGAGAAAGGGGGCCGGAGGATAATGGGACCCCGGAAGAAGTTCCAGTGGAGTGATGAAATCAGGGAGCTGCTCTGTCAAGTGGTGAAGATAAAACTGGAGAGCTTTGACCTGGAGAAGAACAAGGCCCAGTCCTGGGAGGACTACGTGAAGGCATTTCTGGATGCTGAGGTCAAACCTCTCTGGCCCAAAGGCTGGATGCAGGCCAGGACTCTGTTTAAGGAGAGCAGACGAGGCCACGGGCACCTGACGTCAATTCTGGCCAAGAAGAAAGTAATGGCCTCTTGCAAAATGAAGGTGAAGGAATCATCTGCTAAGCCAGATAAGAAGGTGTCCGTCTCATCAGGCCAGACGGGCAGCCCCCTGGCTTTGCCTTCAGAGCACCTGGGAGGAGGCCTGGGCGTGGGGGCCGCAAGCAGGGAGCCCTCGTCCCAGGCATCTGGCAGCCTCGCTCACCCTGCTCCTATCAACCTGGAGGACTCGTTGGATGGAGACTTGGTCCATAATTCTGCCTCCTCGTTGGAGGCAGTGTCCAAGGAACTGGCTGTATTGCACAGCAGGGCTGGTGGGAGCTCAGAGTTCCCACTGCCCACACCTGTGAAAGTGCCTGCAGAGAAGCTCGCGGGTGTTCTATGTCCAGAAGAAAAAAGGAACTTTCCAAAGCCCAGCCCTTCTTCTGCCCCTCCACCCTCTAGCTCTCTGCAGTCACCCCTCAATTTTCTGGCTGAACAGGCTCTGGCTCTGGGGCAGTCCTCTCAGGAGAAAAAAACAGAGAGTTCTGGCTACAAAGAGCTGTCCTGTCAGGCTGCTCTTGGCAAGGGCCCGCCGGAAGGGCAGCAGCCGAAAGCCAAGCACCACGGCTTGCCGCGGACGTCTCACGTGCCCCCGGCAGGCACCGCTGTGCCCGACCCCCAGGTCAAGGTCTTTCATGCTGGCACGCAGCCGCAGAAGAGCTTCACCCCTCCGGCTCCATTCGTCAATAAGCTTCAGGGCCCGAAGCCTGGCTCCCCTCAGTGTCACCGATCCCTCCTGCAGCTTGTCAAGACAGCAACCAAAAGCCAGAGCTTCCATGCTTCCATGCCAGCCTCCTCGGGCACGCCAGCCTCCAGCAGCAGCTCTCATAAGACCCCAGCTTCATGCTCTGCTGCCGTGAGCCATCCAGCAAAACCACACTCAGCCAGCTCTTCAGGACCACCCTACAAGACCAGTCCCTTCCTGGGCTCTGCCTCCAAACATGGGGTGTCGTCCGGCAGCCCCTCGTCTGGAGGAACGCCAGTTCAGAGCCCTGCTTCTGGGAACCTGCTCCCCACGACGCAGCCTCCCTCCACAGGACAGTCCACCAGCCGACCCGTCCCTGGCCCTGCAGTGAAGAAGCCACCTGTACCCCAGAAGTTGACCCTGGTGGCCCCTCCCGGTGGTCCCAATGGAGATTCTAGTGGGGGGACCCAGGGTGTGGCCAAGTTATTGACCTCCTCCCTGAAGCCCAGCGCGGTGAGCAGCGTGACATCGTCTACCTCCCTGCCAAAAGGAGCGAGTGGGGCTGTGCTGTTGACTGGCTCCTCATCCTTGAACCTGCTGTCTTCATCCTACAAGGCTGGCAGTCCCAAGCTCCCTGGGGCCTTGAACTCGAGCCCCTTGGGGATTATCTCCCAGCTTCCCCTCCACGTGATCTCCTTCAGTGCTGACTCCTCTGCTAAAGCGGGGGTCTCCAAGGATGCCATCGTCACCGGCCCTGCCCCCGGGACGTTCCACCACGGCCTCGGCCACAGTCTCCTGGCCGGCGTGCACTCCAGCCCGCCTCGTGCCGCGCCTCTCCCGCACACTGCCGTGTCTACCCACCTCCCGCAGAGCCTGCCAGATGCTTCTCAGCTTCATGGGAAAGGGCCCAGTGTACCAAGGAAATTGTGATTTTCAGGGCAAAGGCTGGAAGCTGCACAAGGAGGTCTCAGAAGTTGGATGATAACTACGCTCTGCCATTGGTTTTCTTCTGGAGAAGGCGTGAGTGCTAAGTGGAGCGTCTCTTGGCACGTGTGATGTGCCTTCAGTTCAGGGAGCAGCCCTGTGCTTCTCTGGGGGCCCTAGCCAGCCTGGTGCTCGGCGCCTCGCGGCTCTGTTGCAGACAATCGTTGGAGGGGCAGCGCTAGGCCAAGGAGCATGCCAGCTCGTGCTGGGCGCTCTGGTGGCGGGGCAGAGGAGGTGGCCCAGCTCCTCGCGTTTGGCCAGAGTACCTCAGCGCAGCGTACTGGTCGGGGGCTCCTTCTGGCCACAGTGGGCTCCCTGGTTGGTTAGAGTGTCCGTCCATCCTCCGGGCTCACACCCCAGCTGGGAGAGGTACCTTGTTCTCTGAAAAATACTCAGAACACCCAATGTGTGCTCATCGTGGGGGCCAGTCTCTCCACTGAACATGACAATGAAGCTCTTTTAGAGAAAAGACCTTTGTAGATTCAACAATTATGGTAGGATTTTTAAAGACACTTATTTTTGGCTCAGTTTTGATCCTTACCATTAAACGCATTGGATAGAATCGGACTGTTCTCCGCACTTCATGTTGTTCCTAGAAAGACATAATTCCAGTGCCTTTATGGTGGAGCAGGACTGGACACGTCCACTCGGCCCTCTGAGTGGGTCTCAGATGAAGACCTTTTTAAAGACATGTCTGTATTTAAGACAGAGCCAGCTTATTTGAGTTTTCTATGGTTGCACATCACAACCTGGGCCATCCTGACTGGAAGGTCACCTGGGCCCTGCCTCCCAGGTCCCAGCTCAGCCAGGGCCCCCCACTTTGTTTCTCCCAAGTTCATGCAGGTGGGCTGCAGAGCCCCGAATTCCTTCTTCGTCTCTTTGAGGGCTGAGGATGTGAGGAGTTCCAGGCTGTAGGTAGACATTCCAGTTTATCGTAAAACCATGCTCAGGCAGAGCTCCGGGAACAGGCCCCTGGGAAGTGTGTGCTGTGCAGAAGCAGGCCTTGAGGTCCGCGCTCTCCAGACAGCAGGCTCTGCCTTCACTGGGAGGTGGACGAGGCCGCGCCCCACTCAGCCAGCGGCTGCTTCTCAAGGATTTTCGGGCGCTTGCCTGTCCTGTGAAGTCTGAACCGACTGTTCCAGCTAAGTCATTTCCCTTATGTTGAGAGTAAATAGCCTCCTCAGAATGTGCGCCTGCCTACGTGGAGACATGGGCAGTTCTTTTGGGTCCTGACTCCCAGGATATGACTCTTGGTGTCTCGCGATTTCTCAGAGGCTGTCCGGCTGCCCAGGGAGCAAGACTGCGGTTGGCCAGCCAGCCGGCCAGGCCTCTGCTTGACTTTTTTTTTTTAACAGAAAAACCAACATGTGTGTCACATGGGGCCAAGTGGAATCCTTGTCCCTTTACTATATCTATTTTTTGCAACTTGGGTTTCCAGTTTACAGACTAGTCTTAGGTAGTAGCAAAAGAGCCAAAGAAGAGATTGGTATTGCTGAGCTCAGAGCGGCGCAGAGGCCGTCCGTCCAAGAGCGCTGAGCGGCGGGAGGACACGAGGTGCCCCTCCCCACCGCGCCCCCACCTCCCGGCACCACCCAGCTTTCGCCGGAGCAGGATGCCCTCCTCCTAGGAATCTAGCGATGCCTCTTGCCTCAGGGAAACGTTTCTTTGATGGGGAGTTGATGAGGTTTCTTTTCCTTGTTGATGCTTTATTTGTGGTAACGGAAGAGTGAGTGACTTGAGCCACGGCAAGGAGGGCTGCAGGCGGAGGCGTCCCGGCCACCATGCTGCGGGCTCCCCTTGCTGGCGATTCTTGGGTGTGAAAGGGCTGTGGCTTTTGTGCAGCGACTATGTTGGTGTTGGGGGTGGTGTGGAAATTGTTAATCTTGTATAAAGCAACACAATAAATTGTTTCAAGGTTTCCAGAACATCGTTTCTTTCGCGTTTCTT EMBV3_39753 GAACAAGTGTCGCAATGAGGACCCTCTACAGGACTCGATACGGCATTCCGGGATCCATTT Gene GeneID:767910|PLAC8:NM_001076987:31_cdna Constitutive 1 NULL GeneID:767910 6 GENE PLAC8 MGC128002 placenta-specific 8 EMBV3_25633 GATCTTTCGGACCCTGGGAACCCCAGATGAGCAAATGCTGCACTACGACCCTAACAAGCG Variant GeneID:519217|CDK2:NM_001014934:1037_cdna 877^996 2 EMBV3_14367 GeneID:519217 5 GENE CDK2 NULL cyclin-dependent kinase 2 EMBV3_24990 TGTGTCTGCTGATAGAAGGACTCGGTGGGCTTGATAGAATTGAGGCTCTGCAACTTCACG Gene GeneID:789280|KPNA7:NM_001163947:353_cdna Constitutive 2 NULL GeneID:789280 25 GENE KPNA7 NULL karyopherin alpha 7 (importin alpha 8) EMBV3_22610 GTTCCCAGACACAGCAATTTTGCAACTGTCTTCTGAAGGAGAGCCATCTCAGGGCCCTTT Gene BVT0101_077142 + 0 NULL GK000014.2:1949075-1957553 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11220 TTCATTTCTGGTCGGTTCTCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGT Gene BVV0102_273841 + 1 EMBV3_23147 GK000030.2:91236074-91245525 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220566 TCONS_00232830 TCONS_00238581 TCONS_00118040 TCONS_00230720 TCONS_00219592 TCONS_00145751 TCONS_00250203 TCONS_00196822 TCONS_00137167 TCONS_00174809 TCONS_00251626 TCONS_00174808 TCONS_00132066 TCONS_00232829 TCONS_00174807 TCONS_00080713 TCONS_00055559 TCONS_00174805 TCONS_00206300 TCONS_00171428 TCONS_00180327 TCONS_00174806 TCONS_00036107 TCONS_00118487 TCONS_00056149 TCONS_00232824 TCONS_00125692 TCONS_00197394 TCONS_00007238 TCONS_00206299 TCONS_00238378 TCONS_00218430 TCONS_00117924 TCONS_00246741 29 XLOC_133883 XLOC_142312 XLOC_145248 XLOC_072206 XLOC_140210 XLOC_132911 XLOC_088920 XLOC_153146 XLOC_118487 XLOC_083377 XLOC_104695 XLOC_154567 XLOC_080699 XLOC_049597 XLOC_033367 XLOC_124877 XLOC_103815 XLOC_110095 XLOC_021081 XLOC_072644 XLOC_033952 XLOC_142307 XLOC_077234 XLOC_119055 XLOC_002800 XLOC_145045 XLOC_131750 XLOC_072090 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_16326 TGGGCGTACAAGGAATGAAGCATCCAGAATGTCCTCACATGGAAACAGGAAAAGTCATGC Gene GeneID:616069|N4BP2L1:NM_001046574:214_cdna UTR3_Alt 2 NULL GeneID:616069 12 GENE N4BP2L1 MGC137817 NEDD4 binding protein 2-like 1 EMBV3_06661 AGCTGCTGCTTTGTGTCTCTCTTCACTCCGCCCCTTCCAGTTGGCTACAAGCTGATGACA Gene BVT0102_022735 + 1 EMBV3_19763 GK000008.2:38927500-38931040 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225005 TCONS_00225006 1 XLOC_137672 Coding TCONS_00225006 XLOC_137672 Coding Coding KIAA2026 8:38929764-39039556 j TSS168576 6872 1 TCONS_00225006_7 1859 8 0.937481214307184 9.37770833702257e-05 1.6798398405939e-45 7.99164418445962e-71 1.76210754799912e-29 4.01152655020924e-71 6.0470721499307e-05 1.28527555746247e-35 1.35749907217624e-124 7.79981291626507e-05 1.6534351384169e-61 5.53374143065922e-06 5.20496912981998e-82 1.45258120572945e-10 2.27522798706952e-05 9.88881406303012e-07 2.97662880017773e-41 7.51729983375459e-45 1.29990610221297e-27 3.96132839626619e-28 2.66272980542837e-33 2.42987918667236e-77 5.55427920669524e-31 1.83736684068318e-51 4.15842933800437e-28 0.00020115743085893 1.52132493279208e-40 1.94358732594196e-59 5.31211378221475e-42 3.52726723669916e-05 7.08024296294776e-05 XM_869083.5 KIAA2026 PREDICTED: Bos taurus KIAA2026 ortholog (KIAA2026), transcript 0.0 1.151e+04 100.00 0.92884167636787 NM_001017969.2 KIAA2026 Homo sapiens KIAA2026 (KIAA2026), mRNA. 0.0 8792 90.36 0.92884167636787 TCONS_00225006_7 sp|Q5HYC2|K2026_HUMAN K2026_HUMAN Uncharacterized protein KIAA2026; 0.0 3132 86.80 0.999462076385153 0 coding 0 0 0 0 -0.0973396560385942 0.447231121325586 -0.0168921434157546 0.779946907564826 TACATCATCTCTTTTTCTTTTGCATGTGAACATATGTTCCAATTGGTCGAGTCCTTGAACCTTTCTAAACTTCACAAATTCCAATTCTACGTTGAAAAACCAGCAGTCACGGGGATGGAGGGTGTTGAGTGTGCAAAGGAAAATTTTTTACAATAGGATAGGATTTACATTCTATGTCTACTTACACTTATGTCTACTTTCACTTTCCATCAACGAAAGTTGTCTAGCAAGCGCCTGCAGGATTAATTTTAGCTTTTATCGCTAAGAGGGGTCTAGCGGAACAAATATCTTCTTAGCACAGCCCACTTCTAAAACCCTTTCAGCCTCCCACTCAGGAGGTGGCGAGCAAAGCCCAGCTGCTGCTTTGCGTCTCTCTTCACTCCGCCCCTTCCAGTTGGCTACAAGCTGATGACATCATTGCTCCGCGCAACCTACCAGGCCTCAGGGCCTGAAGCTGAGACGAAGTCCCGGCTTTCACGTAGCGGCACTTGAGAGAAAAGACAACGATAGCAGTTACATCTAGAGGCTATTATGGATTGGAGGATGAGAAGGGAACTGCATGTACTTCAACAAGGCGTCGGTCAACACCACGAAGTTTGGCAGGCTTGACAAGTGGAGTTTTTGAATCTGTAATGGTTCAAGTTTTGAGACAGGAAGAACAGCTGAGAGCAAAAGAAGAAAAAAGGCTTCGGGAGCAGGAAAGAAAAGAAGCAGAAGAAGCTAGTCAAAAGGAAATAGAAGAATGGGAAAGAAAACTTCTAGCTCAAGCAGCTCCAACTTGTATGGAGACCATGTGGGAAATTCCAGCTATTGGGCATTTCCTTTGTTTGGCCCAGCAAATTTTAAATTTGCCAGAAATAGTCTTTTACGAATTGGAACGTTGTCTTCTGATGCCTCAATGTAATGCTTTTCTATCTAAAATAATGACTTCTCTATTAAGTCCTCCCCATCGCAGACCTACCTTACATCGAAGACCTACTTTGCCTTATAGGACCTGGGAAGCAGCACTGAGACAGAAAGTGCAGCAGTGGTACACGGCTGTAGGGCAGACAGAAAATCCTGACAACTGTGCTGAAAAACTTGGGTTGTGTCCTCAGTTTTTTAAAGTTCTTGGAGAAGTTAATCCATTGGAAGAAAAACCTTTTCATGAGCTACCTTTCTACCAAAAAGTATGGATACTTAAGGGTCTTTGTGACTTTGTGTATGAAACACAAAAGGAAGTTCAAGATGCTGTACTTGGTCAACCTATTCATGAATGCAGGGAAGTTATTCTTGGTTATGATTATTTGGAGAATGCTTATGTACATTTTCCACAGTTCTGTGGTGCAGATGTACGGATTTACAAACAAAGACCTTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTACCTCGGATTAAACTGGAGAAATTGAAGTGTGACTATGTTAGTGCAAGTAATGGAGAGCATAGGTGTAGTAGAGAAGGCCTGCCCTCTGCCTTCAGGAAAGAGCAGGAAATTAATTTTGATCCAACCTGCTGCCCTGCTAAAATGAACTTAGATAATCATGACATCTCTGTTGAAACGGAAGTGAACTCTAACTGTGAAATTAGAATTCGCAGGCCCTGTGAAATGAATATAACTGATTGTTGTAAAGAAAATTTAGAGAAACCAGGAAGTCCAGGGGAGGTTACTAGCTTTGGAGAGCCTCTCAGTCCAGGTGAAATAAGGTTTATAGAAAATCAGGAAAAATATGGTGAAGCTTCCAGAGTAAAGCCTGAACCCAGTCCGTTAAAAGAAAATGCTCTGAAATCTTGCCAGATACATGTAAATGGAAGCCACAGTGATCATCCAGACATTAACTGCCACAAAGTTGTAAGGGATATTCTATTAGAACAGTCACTGCAGAGCCACAAGAAACTCAAACTAACTAAAATGAGGGCAAAAAAGAAGAAAAAGAAAAAAAAGAAATTGAAAGATATTTTGAATGAAAACTTACAGAGAAAGCGTGAAAGTCTTCATTCCCTTGCATTCAAGTCTTACAAACCTGAGATCCAGAATAAGTTACTGATCATCAAAAAGAAAGCAAAACACAAGAAGCACAAATCTGGAAAAAAATCCATATCTAAAAAAGCAATCACAAAGAAGAGGAAAACTGTCACAAAGTCACCTACTGTACCAGAATTTCAGCTTATTTGCACTAATCTTGATGAACTCAGGGAATTAATCACAAAAATCGAGAATGAACTCAAAGATCTGGAAAACAATAGAAAAAAATCGGGCAAATGGTATCATCGGAGGCAAGCTGTAAAAGAATTGCATAGTACATTGATACGTCTTTTAAACGAATTGCTGCCATGGGAACCAAAGTTAATGAAAGCTTTTCAAAGAAACAGGAGTCGCCTAAAGAAAGACTACGATGATTTTAGAAGACAGCCTGATCATGATAAATTTGCTAGAGAACTGTGGACTAGTGAAGAAGGTGAAGGAGATCCTGGAAGAGAAACCCCTAAAGTAGAAATCAGTAGCAAGTCTGTAGACACCACAGAACCTCTAGATATCCTGGAGAAGGATCATTTTGATTTAGATGATATGAAATTGTCAGAAATAGATTTTCCTATGGCCAGAAGTAAGTTGTTGAAAAAGGAATTGCCTTCTAAAGATGTACTGAAGACACTGCCTAAAACACTTAAACGACAGTCCAAGCAAATTAGTTACCTGGATGATAGCACAAAAGAGCTTTCCCCAAGGAAGAAAGCAAAGTTAAGCACAAATGAGACAGTGGTTGAGAATGCAGAAGGTGATGTGCAGATGGACTGTTTGAATGAATCAAAGCATACAGAGCCACTGTGTCCAGAGTCGTTTGCCTCATTGGATTCAACACCAGTGTCTACTCTCCAGAAAGGGACCAAACCTATTCAGGCCTTGCTTGCAAAGAATATTGGGAACAAAGTGACCTTAACAAATCAACTGCCCCCTTCCACAGGTAGAAGTGCCCCTGCTGTGGAAAAGCCAGTTATATCTCCTCCAGAAGCAAGCCCCATAAAGCCAGCATTGACCTGCCACACCAGTACAAAAGGTCCTTTACAGATGGTATACAAAATGCCCTGTGGTCAGTGGTTGCCCTTAGATCTTCATAACAGCTCTGTAAAGATTCAGATGCAACCTATGCTAGATCCTAAATCAGGAGAAAAAATTATGCAACAGGTTCTCATTCTGCCTAAGAATTTTGTGATTCAGCACAAGGAAGGGAAAGCAGTTGCAAAAGAAATACCACCACTTCAACAAAAAGGTACAGAACAACATGGTTCATCTTTCCCACAGACAGCAAATGTAAACTCTTCTTTACCATCAGTTCTTGTCAACCCAACAGGAACTGTTTCTACCCAACTACCTAATACAGCTTTCAACAAGACAGTTACCCCTTTGTCAAATGTGAGTAGTGCTAGACCACAGTCTTTGACATCTGTAACCTCCATAAGTAATTTGTTAGCACCACCAGTTAAGACTAGCCAGAGTGAGGCAGGAAAATTCAAGAACACAGTTTCAGCCACCGCGTTCCCACAGCCCATTGCTTCACCCACCATTTCCTCAACAGTTCAGCCTCAGTTATCAGCAACAACACTAAATGGATCTACAAATTCCAGTAGTTCCCTCAACTGTTTTGCACAACAGACTGCTGATTCTTCTGAAGCAAAGCAAGAACTGAAAACTGTGTGTATAAGAGATTCACAGTCAATTCTTGTTAGGACACGAGGTGGAAACACTGGAGTTGTAAAAGTACAGACCAATCCAGATCAGAATTCACCCAACAGTTTATCTTCAAGTTCAGTTTTCACTATTGCTCCTCAGCTTCAGGCATTTCTGGTACCAAAATCAACAGCTTCATCATCATCTGCTTTTTCGTCAGTAGCTGGAACAACTGCTACATCTAGTCTCCCATCTTTTGGCCAAGCACTTACTTCTGTTTCCATTCCAGCTGGCTTTAATCCATCCACAGGCAAAAATCTTAAATTTACATTAAGCCAACCTTCCTGCAGTGGTAATTTGGGCCATATGATAGATAAAACTTCACCCATGCCCTCCTCTCCCTTAAAGTCCTCTGTTTCTTCTAGCCCTCTATTATCAACAGCAAATAGTTCGGTAAGTGTAATTAACGTATCAACAGGAAATTGTGGACAAACCAGTTCAAATGTTATTCGTACACCAGCTAAACATCAACAAGTAGATTATGTCACAAAAAGTTACCCTGTTACAAGATCAGAAGCAACAGCAAATGGAGATACTATCAGTGGGACTCCAGTGCAGAAACTTATGCTGGTGTCAGCTCCATCTGTTCTTTCTTCTGGCAGTGGAACTTCGATTAATGTGGCACCTGCACCAACATCTCCAGGTGTTTCTGCCCAGAAATTAGTTTTTATAAATGCTGCAATTCCCAGTGGCACTTCAACCCCAACTATTGTAGCAGAACCATTAAAACAAGCTCTTCCTTCTCCATTGAGTAAAACATATGTTAAGCCTCCAGAGCAGCCCCAGATAGTACTAATTCCATCTACAGTGGGAACACCAATAAAAATAAATTCATCGCCAACTGTGTCTCAGATAAAAGATGTGAAAATTGGGCTAAACATAGGCCAAGCAATTGTTAATACTTCAGGCAGTGTGCCAGCTCTACCGTCAATTAACATATTGCAAAATGTAACCTCAAAAGGAGAAGAGAAAAGTAGCAAGGGCTATGTTTTACCATTGTCAACAAGTGGCAGTTCAATTCCAGTAAGCTCAAATTTTATGAGTCAAAATATTACTCCTGTTAATGAATCAGTGGTTTCTGCTTCAAGAACAGTAAACATGTTTTCAGGAACAGGAGCAAATGTATCTTTGGGTTCTGTTTCAGTGACCTCAACCCCTGCCTCAGTTGGGACACGACCTCCTGTTTTAGTCAGTGGAAATGATACCTCTTCAAGAATTATGCCTAGTTTGTCAAACAGACTTTGCACATCAAATCTCGGAAACACTGTGGCTATATCAACTGTGAAAACAGGACATCTTGCATCATCTGTTCTGATTTCAGCTACACAACCAACAGTGTCTCCGAAATGTCTAACATCAGCTTTGCAAATCCCTGTTACTGTTGCCTTGCCTACACCTGTGACTATATCCCCTAAAATAATCAATACAGTTGCACAAGCAGCAACAGTTCCAGGAACTACACGTTCTGTATCTCTTTCTAAAAGACAATCTCGGACTTCGGTCCAGTTTCAGTCACCGGGGGTTTCAACTACAGTGCCAACAAATATAAACACAAATAAACCTCAAACTGAATTGCCATCCCTTTCACCAAATCCAGGTAAAATAATTAACATTTCCAATTTTGCTTCTCTGCCAAACCAGCAAATGTCCCCTGCTTTCTTAAAATCGATCCCTAGTTACAGTTCTACTCCAGGTGTCACTGCCATTCACACTGCTACAGCACCATCAAATGTAACTAGTCTAATAGGGAGTCAGTTCAGTGAACCTTGTATTCAGCAAAAAATAGTCATCAACACCAGTACACCTTTGGCACCTGGTACTCAGATCATGATTAATGGAGCCCGGTTTATAGTTCCACCACAAGGTCTTGGAGCAGGCAGCCATGTTCTTCTTATATCTACTAATCCAAAATATGGACCTCCCTTAGTTGTTAATAGTGGCCAAGGTGCTCAGCCTACGCCAGTAGATAACCTGGCCCAGAAGATCACACTAGCATCAAATAATTCTTTAAGTGGGCAACCTGTAAAACATTGTCTAAAAAGCTCTACAAAAATTGTAAACTCTCTTGGGAATGCAAGTTCTCTATCCACAATACCTGCAGCACCACAAATCATAAACCCAACTGCTAAAGTTTCTGTTCCACCTCCTGTACCAACAGTGTCACTGACTTCAGTAATTAAGTCTCCTCCAGCAACTCTTTTGGCTAAGACATCTTTGGTTTCTGCCATTTGTTCTAGTAATCCTCCACTGCCAAGTAACACTTCAGTATTTCATTTGGACACGTCAGTCAAAAAATTACTGGTCAGCCCAGAAGGAGCCATTTTGAATACCATAAATACTCCAGCATCTAAGGTTTCTTCAGTCTCTCCATCACTCTCTCAAATTGTATCTGCCAGTCGAAATCCTGCCTCTGTCTTCCCTGCTTTTCAGTCATCTGGCTTAGAGAAGCCTGACACAGCTGCATCTTGAATTTAGACTAAACGAGCCAGGTTTTAAATAATGGGGCATTGTTTTGACTCCCATAAAAATTTTAACTGTTTATTATACTGTTGAAAACATACTATACATAGTTTGTGTGTGTGTTAATGTATCTTTTCATTAGCTTGCAACAAGGCTTTGATTTTCTTGGGGAGGAAAAAATCTGTTCCGTTTCACTCATTGATGTGAGTATGTTTTCAAAGGTTATTTGTTTAAAATAGACAGGATTTACCTGTCTATATGACATAAATTGAACAGTCAAGTTTGACTAGTTTGGAATAAGCTAGGGTTTTGCACACCTGCATCGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCGTGTATCTCTGATACAATATTCTGTGTCTTTAGTGGAATAATATTTTTGTTTCTGTAAAAAAATATATATATATATTTATGCATTGTGAAAATGCAGTCCATTGTGTAAAATTGTACATATCCCTAAATCCTTAACAACCTGTACTAAACTATATGTACAAAGAACTATGCTGTCTTATTTATGTTTTGTTTACATAATGTATAGTTTTTTAAGTATTTTAGTAATTTTGGACCAGTGAACTGTTAGCATCAATGCAGAAGAATCTGCATGTAATAAACTGAGTTGCTGTATTTCCTTGTTTGAATACCAT EMBV3_34400 CAATAAGCAGAACCATGACTTAACACATAGGAAAAGTCCCTTGGGCCCTGTGAGGTCGCC Gene GeneID:540024|LOC540024:NM_001081539:54_cdna UTR3_Alt 2 NULL GeneID:540024 11 GENE LOC540024 MGC142879 ashwin EMBV3_17238 GGTAAATGCTGTGAATGAGTGAAACCCTGGTGTTGGCGGCCTTCAGTTTTATCTGGGGTG Gene GeneID:326584|RPL21:XM_002691838:99_cdna UTR3_Alt 2 NULL GeneID:326584 12 GENE RPL21 RPL21P16 ribosomal protein L21 EMBV3_18635 GGATTCTTTACGGACTGAGCCACCAGGGAAGCCCAAGAATACTGGAGTGGGTAGCCTATC Gene GeneID:616094|HTR3E:XM_002684893:128_cdna UTR3_Alt 2 NULL GeneID:616094 1 GENE HTR3E NULL 5-hydroxytryptamine (serotonin) receptor 3, family member E EMBV3_06369 GACACACAGCCACCATTTAGGAGCCAAACTTCATGGCAGGACAGACAACAGAGGCTCACA Gene GeneID:535416|SIRT6:NM_001098084:60_cdna Constitutive 2 NULL GeneID:535416 7 GENE SIRT6 NULL sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) EMBV3_26649 CCTCAGCTGGCTTCTTAGATGAAGTCTGTGTGTATTTATCTAGATTCCAGATTCTATGGG Gene GeneID:506751|LAMA5:XM_002707725:371_cdna Constitutive 0 NULL GeneID:506751 13 GENE LAMA5 NULL laminin, alpha 5 EMBV3_04929 CAGGCGGAATGAGTAAAAGGATGTTGCAGACAGAGGGGACGGCATGTGCAAAAAGCCTGA Gene BVT0102_174610 + 1 EMBV3_38721 GK000018.2:53829838-53834506 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13119 TGTTGACGAGCCCGCTGGAAACTCCTGGAACGGATCACACCCACACTCCAGTTTGTAAAA Gene GeneID:513030|CHST12:NM_001077913:161_cdna Constitutive 0 NULL GeneID:513030 25 GENE CHST12 NULL carbohydrate (chondroitin 4) sulfotransferase 12 EMBV3_17446 TCTGGAGGCTAGAAGGGAGAGTGGAAGAGGTAGGAGTCTTCAGAGTGATATGAGTTGCAC Gene GeneID:445420|WNT2B:NM_001099363:47_cdna Constitutive 0 NULL GeneID:445420 3 GENE WNT2B NULL wingless-type MMTV integration site family, member 2B EMBV3_42665 GTTAAGATTCGGCACTTCCACGGCAGGGGTTGCTGGTTTGATCCCTGGTCATGGTACTAT Gene BVV0102_046044 + 0 NULL GK000030.2:144489540-145222492 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06600 GGGAAGGTGATGTGGCTGGAGATGACGATGCTGAAGAGCTCCAAGCTGCTGAGCACCCTG Variant GeneID:616182|SMAP:NM_001035474:234_cdna 487^558 3 EMBV3_38561 GeneID:616182 15 GENE SMAP MGC128249 small acidic protein EMBV3_21994 TCTGTCCCTGGCTAAACCTTGGAAGCTCACCACAAAACTGTATCTGTAATAAGAGAAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02954 CTGAAACACTAAGACGAATTCCACTGCACTCTCCTCCACACACACTGGTAGTGACACATC Gene BVT0102_100700 - 0 NULL GK000012.2:17961051-17973729 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034667 TCONS_00034674 TCONS_00034670 TCONS_00034668 TCONS_00034673 TCONS_00034671 TCONS_00034672 TCONS_00034669 1 XLOC_020730 Coding TCONS_00034669 XLOC_020730 Coding Coding LOC100847590 12:17960582-17968647 = TSS25563 2440 1 TCONS_00034669_3 346 0.528688524590164 3 0.697792658730159 0.0096073844789412 0.00502857564406217 0.00763590898774862 0.0062139944231906 0.00511311362932673 0.00334431778224677 0.00566508881777007 0.00461588110529866 0.0119463763600027 0.00287363780857152 0.000564791199317932 0.000423639213601186 0.000981146759826992 0.00323430088174133 0.00192299221192004 0.00273065789514404 0.00142211601550138 0.000436967045055122 0.01023206145253 0.00883807152837664 0.00292842224821907 0.000816438787521439 0.000246698501955358 0.000473984933271876 0.00920385818504785 0.00819272756455101 0.00327198743679224 0.000206472009007487 0.000243942027847899 0.000293126332178314 XM_003582852.2 NUDT15 PREDICTED: Bos taurus nudix (nucleoside diphosphate linked moiety X)-type motif 15 (NUDT15), transcript variant X1, mRNA. 0.0 4401 100.00 0.999590163934426 NM_018283.1 NUDT15 Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 15 (NUDT15), mRNA. 0.0 695 90.20 0.208606557377049 TCONS_00034669_3 sp|Q53H47|SETMR_HUMAN SETMR_HUMAN Histone-lysine N-methyltransferase SETMAR; 1e-88 284 42.56 0.968208092485549 3 coding 0 0 0 0 -0.521033392247538 0.103938345570541 -0.0463690002719079 0.43875523186663 ATGACGGCCAGCGTGGAGCCGCGGGGGCGGCGCCCGGGGGTCGGAGTGGGCGTCGTGGTGACCAGCGGCAGGCATCCTCGCTGCGTCCTCCTGGGGAAGAGGAAAGGGTCGTTCGGAGCCGGCAGTTTCCAGCTTCCTGGGGGCCACTTGGAGTTCGGTGAAACCTGGGAAGAATGTGCTCAAAGGGAAACCTGGGAAGAAGCAGCTCTTCACCTGAAAAATGTTCGCTTTGCCTCGGTTGTGAATTCTTTCATTGAGAAAGAGAATTACCATTATGTCACTATTTTAATGAAAGGAGAGGTGGACCTGACTCATGATTCAGAACCAAAGAATGTAGAGCCTGAAAAGAATGAAAGTTGGGAGTGGGTTCCTTGGGAAGAATTTCCTCCCCTGGACCAGCTTTTCTGGGGACTACGTTGTTTAAAAGAACAAGGCTACGATCCTTTTAAAGAAGATTTGGATCATCTGGTAGGATATAAAGGAAGTCACCTAGAGGTGAACAAGGAGATTCACTGAGTTGGTTTTTTTTTTTTAATGGGTTGGCCAAAAAGTTCAGTTAGATTTTTTTTGTACGATGCCTATAGTCTTGCTTGGTTGTCTCTAACTTCATTTAAAACAATTTTGTGAGATTGTATTATGACACCTGTCACAGCAATGTGCATTTTTTAAAAGAAACTTATCAAAATTGGTGAATTTGGGGGGTAGCCATTTTAATATTGAAGATGGAAGAAAAAAGGCAACAATTTCGGCATATTATGCTTGATTATTTCAAGAAAGGTAAAAATGCAACGGATACAAAAAAAAAGATTTGTGCAGAGTATGGAGAAGGTGCTGTGACTGAGCGAACATGTCAAAAGTGGTTTGCAAAGTTTCGTGCTGGAGATTTCTCTCTGTATGATGCTCCACGGTCAGGTAGACCAGTTGAAGTGGATAGCAATCAAATTGAGACATTAATTGAGAGCAATCAACATTATACCACACGAGAGATAGCCGACATACTCAAAATATCCAAATCGAGCGTTGAAAACCATTTGCACCAGCTTGGTTATGTTAATCGCTTTGATGTTTGGGTTCCACTTAAGTTAAGCCAGAAAAACCTTCTTGATCGTATTTCCACTTGTGATTCTCTACTGAAACGTAATGAAAGTGTTCCGTTTTTAAAACAAATTGTGACAGGCAATGAGAAATGGATACTGTTCAATAATGTGGAACGGAAGAGATCATGGGACAAGCGAAATGAACCACCGCCAGCCATGCCAAAGGCCGGTCTTCATCCAAAGAGGGTGATGTTGTGTATATGGTGGGATTGGATGGGAGTCCTTTATTATGAGCTCCTTCCAGAAAACCAATCCATCAATTCCAAGAAGTACTGCTCCCAGTTGGACCAGCTGAAAGCAGCACTCAATGAAAAGCGTCCAGAATCAGCCGACAGAAAGTGCATAATCTTTCATCAGGATAATGCAAGACCACATGTTTCTTTGATGACCAGACAAAAATTGTTACAGCTTGGCTGGGAAGTTCTGATTCCTCCACCATATTCCCCAGACATTGCACCTTCAGATTACCATTTATTTCGGTCTTTACAAAATTCTCTCAATGGAAAAAATTTCAGTTCCCTGGAAGACTGCAAAAGGCACCTGGAACAGTTCTTTGCTCAAAAAGATAAAAAGTTTTGGGAAGATGGAATTATGAAGTTGCCTGAAAAATGGCAGAAGGTAGTGAAACAAAACGGTGAATACATTGTTCAGTTCAGTTCTTGGTGAAAGTGAAAAATGTGGTTTTTATTTTTGCTTAAAAATCAAAAGAACTTTTGGGCCAACCCAATACATAAAAGGCAAAATAAGGTCCTGTTAAAGAATAAAAAATATCTACATTTCAGAACAACTCCATTTTACCTGAGAAGTCCCACGTGATGGACAGTTTATTTGTAGTCTCTTAATATACCCAACACCTTTTCATTCAGTACTTGTGAAGAATTTTCAGAGATTGTGTCATGAACTGTGCTTCAGATTCAGAACACGTGACAATTGGTGATGTTATAAGTGGTAATTCCGCTTTCTGTATTGCTCTGGTATTGATGTGTCACTACCAGTGTGTGTGGAGGAGAGTGCAGTGGAATTCGTCTTAGTGTTTCAGTTCTAGTAGAGATCCTAATTCAAGTGCTACCACAGAATTTATCACACTTGTTGGTTTTCCTTTCCTGTTCTGTTGTTGTTAATATATTTTGACAGTTCCTACCACTAGAGCAGACAGGACAGGTCGTTAGGCTGTATTTCTGATTGGGAATGTAAACCTAGGGAAGCGAGTTAAACCATCCAGGATCTGTATCCCATTGTTAACAGGCCTTACCATTTTGGATCTCAGTTGATCTCTCTCGAGATTCAACTTCCTTGTATGTGAAATGTAATTAGACTAGGGCGGCAGTTCTCAGTATGGTCCG EMBV3_15871 GGCCAGATGAAGTTCCTGACGCTGGGCCAATGAAAACCAACTCTACCAACAATCACAAAG Gene GeneID:540039|NPTN:NM_001076199:240_cdna UTR3_Alt 2 NULL GeneID:540039 10 GENE NPTN MGC139829 neuroplastin EMBV3_38813 GAGAAGCCCATTTTGGAACCCCCCTACATCGAAGCCCATCATCGGGTCTGTACCTACAAT Gene GeneID:539408|LOC539408:XM_002691028:388_cdna Constitutive 0 NULL GeneID:539408 10 GENE LOC539408 NULL similar to Glycoprotein hormone beta-5 precursor (Thyrostimulin subunit beta) EMBV3_11142 AGAGTGGCAGAGCATTCCTTGCTAACTGCCAACCCCGTGATGTGCTCAGAAGAGCATCTA Gene GeneID:100295780|LOC100295780:XM_002685307:138_cdna Constitutive 0 NULL GeneID:100295780 2 GENE LOC100295780 NULL similar to homeobox D1 EMBV3_28713 CTGACTCCAGTCTCATCGGTGCTGTGCCTGCTTATGCTGGTGACCCTTGTTCTATGGAAA Gene GeneID:100297408|LOC100297408:XM_002693894:217_cdna Constitutive 0 NULL GeneID:100297408 16 GENE LOC100297408 NULL similar to Fas apoptotic inhibitory molecule 3 EMBV3_29173 ACGCCGCCGGACTAGCGTCTCTCCGGTCTTGTTTGCGTCTGATAATGTCTGTTGGCATAT Gene BVV0102_224999 + 0 NULL GK000021.2:23262119-23301655 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120761 1 XLOC_073261 NonCoding TCONS_00120761 XLOC_073261 NonCoding NonCoding LOC100848639 21:23245494-23296943 j TSS90134 3346 1 TCONS_00120761_10 72 0.139270771069934 6 0.935080080858342 0.000427079325024308 0.000680660778843457 0.000258852845498817 0.000133193010188787 0.00059667655092936 2.18615699979861e-05 0.000161267512918525 0.000179997652968153 0.000713003172633115 0.000305714375442422 3.96501270852995e-05 6.06272913680526e-06 8.60081430095381e-05 7.27165107012693e-05 1.85262574746584e-57 0.000136221690081803 0 3.74938876988229e-05 0.00079543763404668 0.000713334102720999 0.000103295136580016 8.25927179051189e-275 2.51142406292195e-05 0.000247092823703966 0.000642818904048177 0.00114356197131406 0.000422222951703042 0.000152180494975005 8.88363016859838e-06 1.79684646327727e-06 XR_229227.1 LOC100848639 PREDICTED: Bos taurus uncharacterized LOC100848639 (LOC100848639), 0.0 1516 100.00 0.250747160789002 XM_005254933.1 PDE8A PREDICTED: Homo sapiens phosphodiesterase 8A (PDE8A), transcript 2e-66 259 85.97 0.0657501494321578 0 noncoding GCGGCTTCAGGCGTGGTGGGGCGGGGTCGCGGCTCAGGTGTGTCCGCTCGAGGTGCCCGTGGGGCTAAGTGTGCTCGCGGGCAGTTGCATCCCCGCTGGGCTGGACGCCGCCGGACTAGCGTCTCTCCGGTGTTGTTTGCGTCTGATAATGTCTGTTGGCATATGGCATGAAATATGATAGACTTCTGCCTTTTGTGTCACCTACTCTGCTGCTTCAAGATTTCAAAGAGTCCCAGGAACGTTTTGAAGTTGGCGCTTTTCCTCATTAGACGCTGGAGGAAACAAACAGCCGGATTCAATTGTGAGGAATAAGCTGCATCTTACCTGAGAGAAATACTCTTCTGAGATGCGCGCAGCCCACTCGATGCACTGCTCCAGGGGCCGGCAGGGGTTGGACACGTCAGCACACTTGATCAGCATCCTTTTGATCAGAGTCCGGTTCTCTGGAGCCCTGAGCATGATGAGGATGACAGGACTCTGAGAGGTGAAGAGACTCAGCCAGAGGTACTGAGCTGGCCCAGGATCAATGCGTGAGCCCTGCCTCTAGTCTGGACTCTTGTCTCTCCACAGTAGTGCCTGTGTCTGACTCACAGGGAGCCCCTCTGGATATGGAGCCTCAGCCCCTGGGGTGAGGGGCCTCTGAAACAAATTCAGGTTGGAAGAGTGAGTACCGGGTCAAAGACATGAGCAAGCATCTCCTCTGATTCTGAGCCACCAAGCAGCTTCCAGAGGAGTCAGCCACGTGGTTTCTGTGTGTGACTACTGTTCTGTACTGCCCGCTGGGTGACTATTTTCTTCCACCTGCTATGACCCACTGGATCCTGGTTTCCAGTCTCTCAGTAAAAATCTAAGTAGTGACAGCAGAGAGGAGGAACATGACTGTCAAGGAGAATGAAAACTCTGCTGAGTCTGGAAACTTCCCAGAATGAATGGAGGAAGCCAAGTCTGCGAGGACAGAACGGAACTGAACCTTGAAAACATCATGCTTGTGAAAGAAGCCAGACACAGAAGACCACATCCTGGGGTGCTTCCAATCGTCTGAAATGCCCAGAACTCACAAAGCTACGGAGGCAGAAGGTAGATCTGCGACTGCCAACCCGGGGGCAGGACAGTGACTGCTCATGAGTTCGAGGTTCCTTTGGGGGTGATGGAAATGTAAATGTCGACTATACAGAAGACTGCACAACTTGGAATATACCAAAAACCCCACACGCTTTAAATGGGTGAACTGTATAGTACCTAATTATATCTTAACAAATTGTTTTTTAAAGAGCAAAAGTAAACATACTTTCCAGCTCACTGTTCTTACCGCTCCATGTTTTTAAAGATGTTGCATTTGTCGTCGCCGGTGGTCAGCTGGAAGGCCAAGGCCGCGTGGTGGTGCTCCAGCACAGCCATGTCGTTGTAGAGAATGGCCAGCTCGCTCCCGGCATTGCACAGGAAGGAGTTAGTCCTCCCGGGGTGGTCCACATCGTGGATAGTGGCTGCGATGAGGGCAGCAACCTCATCAAGTGGGTCTAAAGTTTGCTGAAAACAAGAGTTCTTTTAAAAATTGCGGCATGGCACTGAAAGCAAGGTAGCCTTCTGTGTAGTTCTCTTTCTGCCCTTCTGACTTTAAGGTAAGAATATTTCAAACTTCTGAGAAAAGCATAGTGTTGAGCAAATCCAGTTTTCCTAACTCTACTCAGAAATAGTTTCATTTTTGCATGTTTCAGAGGAAACATTATCTGATTCTCAGTCTCGCACAAGTTAGGGATTTACCAAGACACAGGGTGTCCTTACCAGACCGGAGTCACCTCCTCAGCCAGTCTGTCTTTAGACCCATCACATAAAAAGGTCCTTAGTCTGAGGTATTGACTTTCTACTTGGAACATTGATTTAAAATTATCAATTGGGAAAGTAAGATCCCACATGCCATACAGCATGGCCAAAAGTTCTCATTTAAAACTTTAAGTACAGAAGTGCAGGGTACTTTCTTCTAGTAGTCTCCATTTCTAATGTGTATATTCCTGTTTTCTGTATTTTGATTAGTCTGACTTGCAGTGAATTCTCTTGGTTGTTTCAAAGAACAATCCCAGATGATCACATTGCTCTTCTCATTCTATAGGTTTTGATACATAGGTTTCTCATTTTGTTGTTTTCTGTTATTTTTGATTTCTTTGTTTAACCCCAATTTGTTCGAAATATTTTCTCATTTGTAGTGGCTGACATTTTTAAAGTTTTTTGAAGTATATCAAAACTGTGTCTTAGTATCAAGATCATTTTTGGAAATATCCTACGAACACTTGAAGAAAAGGTGTATATCTAATTAACCAGGCTTGTAAATTTATTTAAATTGAAATTCAATAGTTTTAACTTAAAAAAAAGGTTTTTTGGCCGTGCTGCATGGCATGTGGGGTCTTAGTTTCCAGCCAGGGGCTGGACCTGCAGCAGCTGCACTGGAGGCATGGAGTTCAACCACTGGACCACCAGGGAAGTCCCCAGGGAGTTTTAACTTTAAATGGGTGAATTTTATGATGTGAATTACATCAGTAAATTATGTTAAAAATTAACTTATTAATAGCTTTCTGAATGTATATTTGTATGTTATCTATCAAGGAGTTTCAAAAGCATTAAATTACAGCAAAAATTAGGTTCCCTTTATGCTGAACCACATTGACGCAGATGTCTCTCCTCTGCCCTCTGTGTTCATACTTCATGAGAACAGACCTCTCCCTGGACTCTTGTTCTACCTACAGTCTTAGTCGTGACCTTTAGTAAAACAACAACAAAAAACCACCAAAGAACACAGCTAGAGGGAGGCTGGACTTGCCTGCCCTGCACTCGTGCCGGGAGGCTGACCTGTCTCATTCCTCACGAGGCCCCGATTCTCACTGATTCTTCCGCTTTCAGGTGCTTCTGAAAGTGAAACGGCCGTGCACCAGCGCTCCCTGGTCTTCTGTGCCAGTTTATGGCGGATGCTGATGGAAATACTAATAACACAAATACTCTGGCAAAGCAGTGCAGGTCTAGTTGCTGCTTCGAACATTTCCCTAATGAAACAATTTACAATGTGAAAAGCTTTCTTAGGAAGCTTGGTTTGGAAGTGGGCAGTGAGCAGAGTGCCTTGGATGGCACTTTCTTCTCTGACACTCTTACTGTGACACACTCACATTCCCTTTGCTCCTGAGCCCTCAAAGCTGGAGCTAAAGTGGCTCCTATTTGAAGGCGGAATGCCCAGGGCCACATTTGGAATTAATTATCCACTCCCCAGAGCCAGGGTGTGGTCCTGCTCCTCAGGAGGCCGCACCCTTCCCGGGCCAGACTGCACCCTATACCCTGCACCCTCACCCCTGCTGTGAAGCAC EMBV3_28831 CAGGTGAGCTGTGGCACCAAGTCACATCAGTTTCACAGAAAAAGGCAACTTGTAGCTTAT Gene GeneID:789618|CDC42SE2:NM_001102537:78_cdna Constitutive 3 NULL GeneID:789618 7 GENE CDC42SE2 MGC166112 CDC42 small effector 2 EMBV3_18258 TGTCTTTGAGTAGAGGCACAGGCATTCCTCACACCCACCAGAATCCTCCCAAGCATACCT Gene GeneID:506009|LOC506009:XM_002688507:29_cdna Constitutive 0 NULL GeneID:506009 7 GENE LOC506009 NULL similar to CG8043 CG8043-PA EMBV3_40394 CTAAGTAATTTTATTATTATATAGTGTTTGGGAAAAGCACCCAGTTAAGCAGGGACATTT Gene GeneID:280737|BTC:NM_173896:5_cdna Constitutive 2 NULL GeneID:280737 6 GENE BTC NULL betacellulin EMBV3_13635 TGTAGGAATTTTCTTTCCAGCTCCCCGCGCACATCTGGTAGATCCTTGCACACTTTAGTG Gene GeneID:511008|EDEM1:NM_001103092:29_cdna Constitutive 2 NULL GeneID:511008 22 GENE EDEM1 MGC165902 ER degradation enhancer, mannosidase alpha-like 1 EMBV3_39824 ATTTAGCAGCCTGATGCCATGCTTGCAGAAGTCCCACAACAGACTGAGGGCTCCACGGAT Gene BVV0102_166813 + 1 EMBV3_37905 GK000012.2:20887978-20888725 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036450 TCONS_00036454 TCONS_00036452 TCONS_00036455 TCONS_00036451 TCONS_00036453 1 XLOC_021156 Coding TCONS_00036450 XLOC_021156 Coding Coding INTS6 12:20886165-20907709 j TSS26538 4943 1 TCONS_00036450_3 571 12 0.771108944900896 0.000953403913345617 0.000442211334750483 0.000553381192091063 0.000206620346992992 0.000305308004215174 0.000274668256835111 0.000306759804258366 0.000126005862153868 0.000498984645396743 0.000501873068515943 1.78056454752598e-08 0.000481545096221195 3.38577421148739e-05 0.000194318405744883 0.000384715041207275 0.00164306029750229 0.00130824264514251 3.74878289094579e-10 0.000816514029745264 1.78291580773294e-05 0.000327799145183268 0.000969102109705487 0.00150365109626683 0.0016694363994689 0.000663473143270337 0.000447838679784404 0.000583241332293773 0.000109213691467275 0.000187237190247655 0.000612461662217141 XM_002691744.3 INTS6 PREDICTED: Bos taurus integrator complex subunit 6 (INTS6), mRNA. 0.0 3283 100.00 0.367995144648999 NM_001039937.1 INTS6 Homo sapiens integrator complex subunit 6 (INTS6), transcript 0.0 5366 84.17 0.993728504956504 TCONS_00036450_3 sp|Q9UL03|INT6_HUMAN INT6_HUMAN Integrator complex subunit 6; 0.0 1130 97.37 0.998248686514886 1 coding 0 0 0 0 -0.127508826803875 0.270462750928702 -0.0269571573062203 0.575784520872705 GTCAAAGTGGTGGAGCAGAGGCCAGATGAGCCACCTCGTACATCTCATCCTATAGTGAAGTTCTCCTGTACAGACTGTGAACCCATGGTTATTGACAAATTGCCTTTTGACAAATATGAGTTGGAACCTTCACCACTGACTCAGTTTATCCTGGAAAGAAAATCTCCTCAGACATGTTGGCAGGTATATGTGAGCAATAGTGCAAAATACAGTGAACTTGGCCATCCCTTTGGTTACTTGAAAGCCAGTACAGCACTGAACTGTGTCAACTTATTCGTGATGCCTTACAATTACCCAGTGCTCCTTCCCCTTTTAGATGATCTGTTTAAAGTCCATAAGGCAAAACCAACTTTGAAATGGAGACAGTCATTTGAAAGTTATTTGAAGACAATGCCTCCCTACTATCTTGGGCCTTTGAAGAAAGCTGTTAGAATGATGGGAGCACCTAACCTAATAGCAGACAGTATGGAATATGGACTTAGTTACAGTGTCATTTCATACCTCAAAAAACTGAGTCAGCAGGCCAAAATAGAATCTGATCGAGTCATCGGTTCTGTAGGCAAAAAAGTAGTACAGGAAACTGGAATTAAAGTCCGAAGCAGATCACATGGTTTATCAATGGCTTATAGGAAAGATTTTCAACAGCTGCTCCAGGGTATTTCAGAGGATGTTCCTCACAGACTGCTGGACCTTAATATGAAAGAATACACTGGGTTCCAAGTTGCTTTGCTCAATAAGGATTTGAAGCCACAGACGTTTAGAAATGCATATGACATACCAAGACGGAATCTTTTGGATCACTTAACAAGAATGAGATCTAATCTTTTGAAGAGCACCCGCAGATTTCTTAAAGGACAGGATGAAGACCAAGTGCACAGTGTTCCTATAGCACAAATGGGGAATTACCAGGAGTACCTCAAGCAAGTACCTTCTCCATTAAGAGAACTTGATCCTGATCAGCCGCGGAGGTTGCATACATTTGGCAACCCCTTTAAGCTGGATAAAAAGGGTATGATGATAGATGAGGCAGATGAATTTGTGGCTGGACCTCAAAATAAACATAAACGACCTGGAGAACCAAATATGCAAGGTGTCCCTAAGAGACGACGCTGCATGTCTCCACTGCTGAGGGGCCGGCAGCAGAGCCCAGTTGTGAACAACCACATCGGAGGGAAAGGACCACCGGCACCTATGACCCAAGCACAGCCAGACCTCATTAAACCCCTTCCTCTTCATAAAATTTCTGAAGCCACTAATGATTCGACAATGGATGATGTGGTTGAAAATCATGTTGCAGACCAACTTTCATCAGATACTACACCAAATGCTATGGAAGCTGAATTTTCAGGATCTTCTCCAGCCAACTTACTGGAACGACCAACCAATCATACAGAGGCTCTCGGTCACGACCACTTAGGAACTAATGACCTCACTGTTGGTGGATTTTTAGAAAATCACGAGGAGCCCAGAGATAAAGAACAATGTCCTGAAGAGAATATACCAGCATCTTCACTCAACAGAGGAAAGAAATTGATGCATTGCAGAAGCCACGAAGAGGTCAACACTGAACTAAAAGCACAAATAATGAAGGAGATCCGAAAGCCAGGAAGAAAATATGAAAGAATCTTCACTTTACTGAAGCATGTGCAAGGCAGTTTACAAACAAGACTAATATTTTTACAAAATGTCATTAAAGAAGCATCAAGGTTTAAAAAAAGAATGCTAATAGAACAACTGGAGAACTTCTTGGATGAAATTCATCGAAGAGCCAATCAGATCAACCATATTAATAGCAATTAAAAGAAAAGAGAATGTGGCCACTTATTTCACTACCTTCTCCAAATACAAAGTAAATACAAGACTGTTGTGATCTTGCATTCATTTTTTGACATGCATTGTTGGCTTTTTGAAATACTAAGAGCAAGTCTACAGATCCTTTTTCCATCATTTTACAGTGACCTTTTCTTCATTTTGGTTTATTTTTGTAATGTGAAAAGTATCACTCTAAAAAAAACATTTTTATTTAACAAACTAAAAATATTCCTCCAAATCTCTTGCTTGTCATTGACTCTTGCGTGTCAATTTCCCTCAGGTTCTATTTTCTTAAACCAACCTTCAAAATTGTCACCTCTGTTAAGGTTGAACTTTGCCAAAAAAATAAAAAAGTTACTTTGTAATTTTTGGGGAAAAAAAAGCACATACATTAAAACTAGGCAATGTTTTGTATATACAGTTATTTTGGATATATTATTGTAAGTTGTACAAATGTATTTTGAAGAATATTTAAGAAAAGCACTTTTGTTATTCCATCAATAAATGCTCTATTTTACTCTTGTGTGGTTTAGGAAATAATCACATTTAAAGTAATCATTTAAAACCATCTTAAGATAATGGAATTTTAAAGGCATTGCTTTTTAGCATTGGAAAAATACACCACTTGAAGTTCACATTTGTTAAACCTAACTGTAATGACATGTTACATAATCTGCATTGTCTTTTTACTCTATGTTCTTAGATTTTGTTGGCCACTCCGACACACTCCGTTTCTGCCTAGACAATGGAAACGTATCTGCGGATAGGCAGACTCTTAAAAGCTGTTTCAAAAGCAGACACCTTTGAACTCTATTGGTTTCCTTACTTCCTTTCCTTCAACCCCTCCCTTTTCCTTTCTCACCAGGACTGTGGTGAAGCTGTCAGGGAGTTGTAAATTTGGGGGACACCACATACTCTGAAATGTGTAGCATTTAGCAGCCTGATGCCATGCTTGCAGAAGTCCCACAACAGACTGAGGGTTCCACGGATCTCTTTGTTCTGCTCTGCTGTTACACTTAAACTGTCCATTTCCTTTAGAAGCTAAATGGAAAGGAAACACATTTTAAATGACTTTGTCCATTCTGCATTCTCCCTGAGTTGTCCAGGATAAGGAAAAGGCAACGCTATTCACTATCCACCCTCAGTCCACTGTGGCCTCACGTGTCCTTACTGAGGACTGTGAGCCTGTGGCCTGACTCACTCACCATTCATAGGTCACTGCTGTGCCTTTTAGTGCTTCGGGGATAACGAGTAGAAAAGAAGGCTAAAACACATTTAGATTAAAAGAGGGTAAAATAAATTTATAAAATTATGGCAAAGTGGAAGTATTTTTAGGTTCATAATATTTGAAAAACACATACCCTTATCTTTGTACACCTCAGCAGATCATTTTTTAAATTTCAGGGGTATAGGAAAATGAAATTGTAATTTTTGAAGAAAAGCATAGATAAAGTGGAGAACATGCTTGAGCTCTGTTATTTCAGTGTAGGGGGTTCAAAACTCTCCCAATACTGAAGACAAATGCTGTCAAGAAAAAAACATAATGTAGTGTTACATAGTATTTTCATATGCAGTTCTTTAAACATTTTTTTTAAACCTCTTAAAAAATACCTCTGAGCAGGATATTACTTAGTAAGTGGAATTGTTAAGGTATTAATAGTTAGCTGCAGTCACATGGCTAAATTCAACATCAGATACACAAAATCCAGAATATATTGTCTGGTTTTAAATTATATATGTTTAGATTCTGAGATTAACAGAAGAGCTTTACAAGTCATTCAGATAAAAGTTAATATTTAACAAGAATGTTTAGTAAAGCAACTAAATATTCTGTCTGTTCCAACATTTGCCCACTTTTCCTTATCAGAATGTTCTTTCTTGCATTTCACAGGTTGCTCATGAGGTGATCCTTTAGACCCTTGATCCTTAATATATTTCAGGGTATGAACCCTAGGTGGAGTTGGCAAGAAGCAGTTTGTGTTGTCTCCTCTTGTCCTTAATCTCTCTGCCACCATACTCCGTCTACGCTCTTACCCCAAAATACAGTCACAAGCTTTGAAACCCATAAAAATTCAAGCTTAATATTTTATTTCTTGCAGAGCTTTTTTTATTTGTTTTTACAGATTAAGAAACTGGGCGTGTTAGTTAAATTACTGAACTACTACAGCAAAGGGGAAGTGGGAGTACATGGAGGGGAATATCATGTCTTTTAGGTCCTTTAGATCACTGGATGGCTGACTGTAGGCTGGACAAGTGATGTTCTCCAACAGTTTAATCTTGAGGTGAAGATCATTTTTGGTAATGTTCTTACATGTGTCCCATTTGTCAACTGATTGAGTTATGATTTGCCCTTATCAGTAAGCTTCGTCAGTTTTGTATACTGGAGGCTGAGGCTCATTTCTGTCCTTTCATTACCCCGTCATCAGAAGAGTAGCGACTCGGCCTTGTGTGATGTGAGCAGGTACCTCCCAGGGAGAAAGGCAGAGAAACTCACGGGGACTATTGCGGATCATGGAACTGGTGTTGGATTATATTTTCATTCTGTTTATTAAGGCAGTTCTGAAAACTCTTTATCACAGAAACAGTGATGTATCCTTTACTAGTCAGTTCAAAGATTTTACATCATTTTATGCAGTTGAATTCCAGAAGAGAAACTGTTCTCTTAACTGTCGTCAACCTTTATTGGCTATGAGCTTTTGACAGTGACCCTTCTGTTCAGGTTTAGTCCAGTCTCTTGTTTCTTGAGGGAGTAGAACCTGTCGTTCTTCATCTTAACTGTTTTTGACCTGTATCCTTTCTAAGAGAGGGCTCTCTGATACCTGTTCTGAGTGATAAGTGACATTTTCATCTGGTGAAATACTATGAGGATATATTCTGTTGATGGACTTTCTCTCCCCGCAATAATCCCTTAATAGATAATTCCCTAGTGAATGATTATCTTCATCCTTTTTGTCACAAGTGTCTTTGCTTTCTAGCACAAATTACAGCCGTACGCAAATGATTCTCAGATAAAATGATGTTGACAGTATTTCCTTAACGATTTGTGTAAAACCTATGCATAATTTTCATTATTCTAACTTGACATTTTTTCTCTCCATAAATAAAAATAATGCCTGATGTTTAGTTAAAGT EMBV3_31565 GACAGAGACCCTCCCAACCTAGCATGGAGAATTGTACCAAGCATCTTCCTCATTACCCAC Gene GeneID:100139116|SGIP1:XM_002686324:100_cdna UTR3_Alt 3 NULL GeneID:100139116 3 GENE SGIP1 NULL SH3-domain GRB2-like (endophilin) interacting protein 1 EMBV3_29731 TATGGCCGGCGCCGTGGACCGCCCCGCAATGCCGGTGAGATTGGTGAGATGAAGGATGGG Variant GeneID:533297|CSDA:NM_001098074:101_cdna 611^814 1 EMBV3_35409 GeneID:533297 5 GENE CSDA MGC148333 cold shock domain protein A EMBV3_09561 CCAGAGCCCCTGTCACTGCCACCCAACGGGGCAAAGAAGCCAAAAAGATTTCTTACTCTT Gene GeneID:509200|HNF4A:NM_001015557:967_cdna UTR3_Alt 2 NULL GeneID:509200 13 GENE HNF4A NULL hepatocyte nuclear factor 4, alpha EMBV3_24046 AGAAGACAAAGAAGGCTGCTCGGTGGAAGGAGGAGGTCTGAGCTTCGTGGGTAACATGAA Gene GeneID:785684|LOC785684:XM_002699483:84_cdna Constitutive 0 NULL GeneID:785684 X GENE LOC785684 NULL similar to Homeobox protein ESX1 (Extraembryonic, spermatogenesis, homeobox 1) EMBV3_39587 AAGGGAAGACACCTGAATTTTGTCCCTGCTTGTCCCATGGCTTTGGTTCACCTGGCCTGA Gene BVV0102_196221 - 0 NULL GK000022.2:6942333-6986563 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125861 1 XLOC_077322 NonCoding TCONS_00125861 XLOC_077322 NonCoding NonCoding - 22:6946654-6948948 - TSS94567 675 2 0.706498037505451 5.89380442648381e-05 0.00026126919427977 0 0 5.25759094586518e-294 6.27645497518145e-228 0 1.2284240432403e-187 1.19158379586492e-103 0 6.24662990462292e-36 0 0 0 1.58860652838976e-79 0 0 0 0 2.77617120445488e-180 4.14399137189363e-229 0 0 0 0 0 0 1.25425771052771e-61 0 0 0 noncoding 0 0 0 0 -0.0354545411079519 0.765643914828168 0.0267457194075985 0.566371331252616 CCCTGCAAGCAGTGGGTGGGCGTAAAGCCACCAAGATTCTCAAACGAGCAAGTCGTTTGAACAAGAAGTGAGTCACCTTCCAAATAAAATTCCTGGGTAAGCAGGCCACTGAATGCCAGGAAGAAGGCAACCCAGGAAAACTGCTACACAGATGAATCTATTTTACAATAGCCAAGACAGGTGATTGACAGAGTTAAAATGGGCGGGCAGAGCGGACCAGAGGAGTCGTGAGCCTGCCTGCGACACGAGAGCCTGGAGTGAGTCCTCGAGTCCTGCGTGCGAAGACCTACTCGGTGCGAGCTGACTCCCCTCAGACCAGGTGAACCAAAGCCATGGGACAAGCAGGGACAAAATTCAGGTGTCTTCCCTTATGGAGTACTAGTCTCATGAAAGCCAGCTGACAAGAATCAGTGAAGAAGCCCACCCTGCTCCAAGGTGAGCAGGTCCTCTATAATGCTAGAGCCTTTCAGTGAAGGCAAACGGTTGATGGCCTGCAGCAGTGGGTGGCCCATGTGATGAGCTGAATTTCACGTGGAACTTTCTAGTCAGTGCACTGCCCACCCCTGGTCTCCCAGGAATCAGTGAACAATATCTGTGTATCAGCTCATGGACTGTCACTTATGACCCAGCTTTAATGGTCAGGTCTTTGGGCCCCCCAGGACTGGACTCCTAAAG TCONS_00125853 TCONS_00125857 TCONS_00125858 s 3' 4320 TCONS_00125853 TCONS_00125857 TCONS_00125858 s 3' 4320 EMBV3_22957 AACTGTTTCTCAAAGTGAAGAATGAAGGGGGAACTCCAGCCAAGGTCCTGCCTTCCTCTG Gene GeneID:538835|ARHGAP30:XM_002685852:394_cdna Constitutive 0 NULL GeneID:538835 3 GENE ARHGAP30 NULL Rho GTPase activating protein 30 EMBV3_38866 CCAGAGGCTGGGAAATGGGAGATACCCTGTGCTGTTCGTCTTGACCGTTTCTTCTCTTGA Gene BVT0101_021665 + 1 EMBV3_32358 GK000020.2:6239994-6355833 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33829 CTGGCCCTTAATGCGGCTGGAGAAGTGCAAGAAGGAACAAGCCATAAATCGAGCTGTTAT Gene GeneID:100335673|LOC100335673:XM_002695811:155_cdna Constitutive 0 NULL GeneID:100335673 19 GENE LOC100335673 NULL hypothetical protein LOC100335673 EMBV3_21468 AAGTAGTTGGTTGGAGGTAGAAGCAGTGTTGAGGTGAACTGTTTTCCAGACTGGGAGAAG Gene BVV0101_002936 - 1 EMBV3_40098 GK000020.2:34852642-35018907 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05360 CGACTCGGGCTCAGCCCTCTTGTGTTGAAGAGAACTGGGGTGCTCGTTTCTGATTCACGG Variant GeneID:616873|FAM19A4:NM_001076435:65_cdna 518^844 1 EMBV3_20328 GeneID:616873 22 GENE FAM19A4 NULL family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 EMBV3_00667 ACATACTTCGGTTATTAAATCTCCTCCATGAGGCCCAACGCAGACCAACCTGCTGAGCTG Gene BVT0102_184324 - 1 EMBV3_33874 GK000024.2:47255146-47271787 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140432 TCONS_00140433 TCONS_00140431 1 XLOC_085128 Coding TCONS_00140431 XLOC_085128 Coding Coding HDHD2 24:47255726-47297264 j TSS104818 2390 1 TCONS_00140431_1 144 0.0539748953974895 6 0.942605387967354 0.000433560596974341 0.000244588102139157 0.00089410312372671 0.000661324756501083 0.000413225331917688 0.000366895157727723 0.000101824098982012 0.000203020497511578 0.00026551934741776 1.87394111988162e-09 1.28869974730355e-08 3.29360534509063e-05 9.94807589999571e-06 2.82437683945678e-05 6.00859647144883e-09 0.00108717722035845 8.25546621392911e-05 1.10237048611242e-06 0.000108603689439981 0.00031993337964457 0.000158702799648281 0.000168993837244067 0.00015816438946353 0.000173032659087895 0.000383935674944389 0.000354064189765015 2.02600167920895e-12 0.000136179725752287 3.2783332532794e-05 0.000189960084824527 XR_239887.1 LOC100847542 PREDICTED: Bos taurus uncharacterized LOC100847542 (LOC100847542), 0.0 3314 100.00 0.768200836820084 NM_032124.4 HDHD2 Homo sapiens haloacid dehalogenase-like hydrolase domain containing 2 (HDHD2), mRNA. 2e-167 594 92.38 0.169874476987448 TCONS_00140431_1 sp|Q3ZCH9|HDHD2_BOVIN HDHD2_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 2; 9e-90 266 100.00 0.909722222222222 1 coding 0 0 0 0 0.0337215691108439 0.836683409270802 0.0173276092624488 0.719432983809395 GGCGCTGAACCTCGCGCTGGCGGACGGGAATGAAGGATGGCAACACGCCGTGCATTAAAAGCTGTTTTGGTCGATCTCAGTGGCACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCTCTTAAAAGGTTACGTGCTACTTCTGTAATGGTTAGGTTTGTGACCAATACGACCAAAGAGAGCAAGCAAGACCTCTTGGAAAGATTGAAAAAACTGGAGTTTGATATCTCTGAAGATGAAATATTCACGTCTCTGACTGCAGCCAGAAACTTGGTAGAGCAGAAGCAAGTCCGACCCATGCTGCTGGTTGATGATCGGGCTCTACCTGATTTTAAAGGAATACAGACAAGCGATCCTAATGCTGTGGTCATAGGACTGGCACCAGAACATTTTCATTATCAAATTCTAAATCAAGCCTTCCGGAAGCGCAGCTTTTGTGATTTATGTCAAAGAAAACTGTGATACAAACTTGCTCCATGCAGATAACTGCTAACAGGACAAGGGACTCTGCCACCGAGGCAAGTGTTTTAATGAAACACATTAGTGCAGTTTTAAAAATTCTTTATTATAAGTACCCAAGGACTTGAGTTTCATCCTACATGAACCACCAGTGATCCAAAATCAACTGAACATCATCAACACAGGTGTATTTTGACTTTCCTGTACAATTCACTCCTGTAATTTTTCAATGTGGAATTAGGGTTAGGTGATGACACCTGTCACTCCAGGGGAGTCTGTGACATCCACAGCCATAGGTGTTTGATGGAGCCGTTGCTGAAGGAGGTGGGCAAGCCCCCTTCTTTCGGGGCATCACTATCTGCCCTGAGAGGGGTGGAATGGTGGGTAGGCAGAGTCACTGCAGAACTCGCTGATTCTGGATGGTGAGTGTGAAGTGGGCACAACTGTATCTCCCCCAGGACTTGCCCTTCGCCCATCACACCGAGCACACACCTGGCTCACAGCAGACACGCAATGACCACCTTCCGACAGTGGATGTTCTCTAATGCCCTTTCCAGCCCTAAGATGTCACTTGGTCCCTTTCTGGGGCCAGGACAGGATTACAGTAAAGCTGATACAAACACTTTCCTTGGGGGTCAGTACCACAGGACAGTCCTTGAAATGTAATGGCTGGAAAATAAAGTCCTTTACATACTTCGGTTATTAAATCTCCTCCATGAGGCCCAACGCAGACCAACCTGCTGAGCTGGGAATGTTTCCAGTAATTTCAACACTGTGGACAGGTCGGTTAGAAAGCCCTATTTAACGTTTGTTAAATAAAACGGTAAACTAAGGTTTTAATGGCTTCTAGGGCCACGTGAGAGTGGAGGAAAGTGGAACAGCCACTTCTCCTGGCAGGGCTGGGTGCACACGGTGCCTTACCCTCTCCTGCCACGCACCTGTCAGTCATGTCTACTGCGTGGCTTTAGCTCTAACCTGTCCCCAGAGCATCAGAGCCATTACTTAAATGTCTAATGGGCCTCTTCTATGGACAGCAAGTCTAAAATGAAACTTATTTTCTCCTCCCTACCCACAGCTAAACGTTCTAGCATTAAATTCTTCTGATATTTACAGCTAAGTTTGATTGGTCCGGTGACTGCCTTAGTACCTGTTCTGTGCTGTAGCAGACACAGTCTTGTCTGGTGGGGAGAGGAGACGCGTGAAGGTCCAAGTGTAATCTAACAAGTGCAGCACAGAGGTGGGGACACTTCCTCCATTCTGCGGGCAGGACATCACAGGACAGGGACACAGGATCTTCACACTACCTTGGGCATCCTCCTGGGCCCCTCCTGGCCAGATCCTTCTCTTATACGCTTGCTTCCTAGCAGGCACTTCACACACAGCAGCGAGCAACACTTGAGAACGCCTGGGCCAAGGAATCGCTGCCCCAGGTGCTGGGGAACAGGCCACAGGTGAACATACCAGCAGCCTCTCTGCTTGCACGCAGGGCTTCCCCTCTTTGCAGCTCTGGTCTGAAGGAGTTCAAATATCGTAGAATGTCTCTTTTTTTAAATTCTCAGGAAGACCTTCCCCACTGAACTGGCTATAGAGATGAATTCTACCAAACTTTCCCAGATGGTTAAATGTGGACACTCCTGTATCTGCATGTCGTCATCGCAGACGTGGGAGACTTAGCATCTGCCTGATTCCATTCAAAGTCCTTAACACGTGGGCAGCGCATTTAACTCTCACAACACGCCTGCGTGGTGGGCACCGTGGTTATCTCTATGGAGAAGGGAGCAGAGGCAGGAGGGGCTAGGGGAGGGGCTAGGGTCCTGGAGGGGCGAGCTGGCAGTGCTGGCCAGGCTCTGCGCCCCTGCCACTGCCCCTCCTTCCCGTCCGGGTGGTGTCCCAGCACTGCTGTCTTTGGCACTCTGCCACAT EMBV3_13809 TCCACCTGCTCCTCTCACCTCATTGTCCTCTCCCTGATGTACGGCAGCTGTGTGTTTATT Gene GeneID:100298658|LOC100298658:XM_002698957:81_cdna Constitutive 0 NULL GeneID:100298658 28 GENE LOC100298658 NULL similar to olfactory receptor 49 EMBV3_15946 TCGATTTATAGCCGCAGTCATCGAGCGTCATGCACACAGTCCAGAAAGGAGGCGTCGCTA Gene GeneID:536020|CACHD1:XM_002686328:111_cdna UTR3_Alt 2 NULL GeneID:536020 3 GENE CACHD1 NULL cache domain containing 1 EMBV3_36775 ACACACATTTCATCTGAAGGAGGGGCAAGGGTAAGATTCTGGGGCAACAGCCTTGGTAAC Gene BVV0102_176607 + 0 NULL GK000018.2:11121016-11172007 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082262 1 XLOC_050951 NonCoding TCONS_00082262 XLOC_050951 NonCoding NonCoding - 18:11133052-11138491 - TSS62077 4526 5 TCONS_00082262_13 82 0.60362350861688 2 0.168076498712762 4.36973647368222e-308 0 2.50566355025684e-249 1.90421970161431e-05 2.32357451260904e-139 0 0 4.00530904561661e-06 0 2.69913678591586e-05 6.70167078586736e-06 1.39850068234316e-05 2.21884245660823e-06 3.85705960873092e-06 2.19329789665269e-05 0.000788157211887277 0.000106377760989846 0.000466781536501299 1.5750057761274e-195 3.57507068030475e-06 2.29530358690714e-05 0.000788207046587767 0.000279449794971744 0.000579501672551559 1.53929289717789e-06 9.32142475027582e-189 6.74126474375221e-06 9.00883608699967e-05 1.58481907141112e-05 0.000123163280911222 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 0.0 857 94.74 0.120857269111799 XR_243417.1 ZDHHC7 PREDICTED: Homo sapiens zinc finger, DHHC-type containing 7 (ZDHHC7), transcript variant X1, misc_RNA. 3e-47 196 81.68 0.0388864339372514 0 noncoding 0 0 0 0 0.0286611180843483 0.77922187647768 0.0858246498221872 0.114729998990977 CGGGCGGGGTCGCCCGGCGCTGCGGCTCCTCCCGATCGGCGGCGACGGCGGCGGCGGCGGCGACTGCAGCGGCCGAGGCAGGGACGCATCATGCGGCCGCGCTCATGGCCGGGCCACGGCGGGCCCCGCGGCTCGGCCCGGTCCCGCCGGGCCGGTCGGAGGGGGTCGGCCGCCCAGGGGTACACGAGACCCGGAGGCCGGGCCGGGAAGCGCGGAGGCTCGGCTCCCGGAAGTGAACCGCGCGGGTCGGCGGCGCCGCGCTTGCGCAGATCCGGCCGCGCCGCGGCGGGGGCGGGGTTTCTGTGACTCTGGGACCGCGGGTCCTAAAAACTGGCTGTTCCCAGGGAAAGGTAGCCCTCCTTAGTCTCAAGGTCCGCTTTCTAAAATAGAGCGACCCGTGCAAGCTGAAGTCTGGGGAAGAGAAAGGATGGGGGTTACGGGCTGCCACAGGCTTTCGGACCCGCCTGTCCAGGGGCCCGCGGCGGCGCGGGTGAAGCCAGCGAGAGGTGCGAGCTGTGCGTGCGGCGCGCGGGGATGAGAAATCCGATCACGGGCAGATTCTTTACCGATGAGATATCAGGGAAGCCCTCCTAATCTCCTGGCTTATTTATTTCCACAAGGAAGAAAAGAGAGGTAGGCTTCCAATCTGTGGGCAATTCCTTTTGTATAGGCTGAAAGAAAGGATGACTGTCTTTGGATAATGTCGAGACTGCAAGTGGCTGCTATGCTTAAGATACACTTGCTATGAACAACGTTAAAAGATATCTTCTTTTATATTAAAGAAATTAAAAGACGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGATAGCATGTTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTTCGTCTAGTCAAGGCTATGGTTTTTACTGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAGGCTGAGCGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGACTGCAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGACGCTAAAGCTGAAACTCCAGGACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAGAAGACTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGACGTGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAAGGAGGCCTGGCGTGCTGTGATTCATGGGGTTGCAAAGAGTCGGACACGACTGAGTGAGTGATCTGATCTGATCTGATCTGATGGTTGATTTACAATATAGTTTCAGGTATACAGCCCAGTGATTGAATTATACATATATGTGTATATGTTCTTTTTCAGACTCTTTCCCCTTATAGGTTATTACAAAATATTGAGTATAGTTCCTTGTCCTATACAGTATGTCCTTGTTGGTTATTTGTTTTATATATAGCAGTGTGTATATGTTAATCCCAACCTAATTTATCCTTCCCCACAGAAGTATCTTTAAAAAAAAGTTAATAAACACAACAAAACAGATCTGAGAAATTTTGGAAGTTAAATCATGACTCTCATACAAATATGCCAAAGATTTATGTCTCATACACATGTCAAAGATTTAACTCACTAATTTATGAGGGGAAAAGTAGGTACGATGAATGATAAAAGTGGTTCAAAGATGAATCCAAAAGACAGGTACATGTAGGCAGTCAGGAATGCTGCCAGTGGTTAAGACTCTGCATCCCAATGCAGGGGCCACGAGTTCAGTCCCTGGTTGGGGAACTAAGATCCCACATCCCAGTGTGGCCCAAAAATTAAAATAAAAAAGTATTTGCTTAATTGAACCAAATCAAAACTGGCTTCTATAGTAGGGAAGTCAGTTGATCTTCTGCCAGACAAGGTTCATTTAAATGTCAGATATCAGTGGGCAGGAATTGTTACCAAGCAGGTCAGCTGGACTTGCATGGAGATCTCTTGTCTTTTTCCTGAAACTGGTGCTGAGAGTGGAATCACACAAGCTATATTCAATAGCCAAAGAATGGAAAGGGGGAACCTAGTTTGCATATCAGCTCTCAACCCAAATCTGGTGGAGCCACCAAATATATTAGAAGGTCAAGGTTAAAAGGAAGGAATTGGCAGGAGGGGAAAGAATATTCATGACTTACTGGAGAACTGGGGTGTGGTTTGGACCCAGAACTGTTGCGCCTCTCCTTTGCAGTGCTTTATGGGCTTTTTCAGTTGCTGTCCTGGCAGTTGTCAGCTGTCCTGGCGCTGATGAGTGTGTCATTTAGCCTGTGCTAATATATTACAGTGAGCTGATAATGAGACTCAAGGTCCACTGGAAGCCACATCTTCCCCACTCTTTGGCCTAGTTTGTTCTCATCAGTTCTTGTTACTTTTTCTCTTTGCATCTTCCTCCTGAAACTTGCATGCTTGTGGGTGCTCATTTGCTCAGTCATGTCCAACTCTTTGCAACCCCATGGACTGTAACCCACCAGACTCCTCTGTCCCGGGATTTCCTTAGATAAAATAATTGGTTTTGGAGTTCTGTGGTGGTCCCAGTGGTTAGGGCTCTGAGCTTTCACTGTAGGAGGTACAGATTTGATCCCTAGTCGGGGACTAAGATCCTGCATGCTACATGGTACAGCCAAAAATTTAAACTAAGTAAATTAAAGAAAAAAACACACATTTCATCTGAAGGAGGGGCAAGGGTAAGATTCTGGGGCAACAGCCTTGGTAACAGAATCACTGGCCTTGCTGTCTATTCTCGAATCTATAGCGTTGGGACACCCCTGTTGGCTCCAGTGGCTGGGAGTGCACACTTCCAGTGCAGGATACCCAGGTTTGATCCCTGGTCAGGGAACTAGATCCCACACACTGCAACTAAAGATCCCAAGTGTTGCCAACTAATACCCAGTACAGCCAAATAAATAAATAAATTTTAAACCTATAGAATGGAACTTCCCTCATGGTCCAGTGGTTAAGAATCCGCCTTCCAGTGCAGGGGACATGGGTTCGATCCTTGGCCTGGGAACTAAGATCCCGTGTGCTGGGAGGCAGTTAAGCCTGCACATGCCACAGCTACTGAGTCCCTTCACCACAAGGAAAGATCCCTAGGGCTGCAGCCAAGACCTGATGCTGCCAAAAAAAAAAAAAACCTATGGAGTTAGAAATAGCTTAAAGCAAAGAAAAAGATCCATAGACCCAGATAATCCAAGGGTGTGCAGGACAACACCTAGTTGCCCGTTGAAGACACACGCTGACTTTGTGACCCATTTCAAAGTCTTTCACAAAAAGACTTGTAATTCTCCTCAGCCCCCACACCTGTACGGGCTTGTTTACTGTAACTTGAAAATTGCCCTGTTGCTAAAGGAAGTAGCATGATGAAATCATTCATTAAAATATCTAACAGGATGACAGCAGTTGACAAAAACAATTCAACTCTTATCAAGGATTTTCATCTTTCTCAACAGACTTGGTATGTGGTCTTCTGCAAGTCATTTCCCTTCTCTAAGCCTCGGCTTTTTTTTTACTCTCTAAAAAAATACAAGATTAGACTTGATTTCCAAGGTTTCTTCCTATTTTGAGACAGTGGTTCAACACACTTTTTTTGGGTCTCTCTTTTATTTCATAAGGCCCACGGAACCAAACACCTACCCTTGGATGTCCTCACAGGAATGAGGACATCTCAGCTCCAGGATCAGTTCTGTGTATCCATCAGGAGCTAGTGTGCAGCTAACCACTCATCCCACGAAATAGTTCTTTTAAAGTGGAGCCTCCGTTCAACCACATGAAAAGATGCTCAGCCTCATTCAAAGTAAAAGGAATGAATCCAGATTTAAGAGTATCAAGAGCTCCCATTTTTCACCTAGTCAGTTGATGAACATTAAAGTTTGGCGATTCTGTGTGTTGGCAGGAAGACCAAATTGGTACAGTTGTCACTTTATTCAGCTCTTTGCAGAGCAAGATAGAGGTATGAATCAAAACAATTTAATTGTATTTACCCTTTGACCCAACTTAGCAATTTATCCTCCAGATAGAGTCCCTCATGCACACAAAGATGTTTGCACTTCAGTATTTATAGTAGAATGTTTGTAGAAGCATAAAAATGCATCGCCCTATATGCTGTCAGTATATGAAGTAGAGCATGTTATACATACGAATGGAATACTGTGCAGTGATATCTGAGGTATATTAACTCTATGGTGTCAGTTCAGTTCAGTTGAGTTGCTCAGTCGTGTCCGACTCTTTGCGATCCCATGGACTGCAGCACGCCAGGCTTCCCTGTCCATCACCAGCTAACTACGGTGTAAAACTGTATTTGAAAAAGAAGATCTGGGGCATATATATGTTTGTATATACAATCCCTGGGAAAATGTACAAGGAATAGGTTTGTAACTTGTTAAGTTTGTAAACCAGGTATCCATTTTTAAATACATAAACATTTAAAATAAATGAGACAACCCAATGGA TCONS_00085417 r 5' 0 TCONS_00085417 r 5' 0 EMBV3_07230 TTTCAGTAAAGTGTTTTCTGTAATCTTTTTAGTGGGGGTGGCAGAGATGTGGTGGGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31724 CATCAACTCTGCTGTTACTGACACATAGACATCGCACGCAATGCCACTTTCAATTTTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27601 AGGAGGATCTTCCAGGAGCCCTCCGAGCCGGTGGACCTTTCCAAGGACATTCAGCACTGG Variant GeneID:508167|RRM2:XM_002691481:368_cdna 220^363 3 EMBV3_36408 GeneID:508167 11 GENE RRM2 NULL ribonucleotide reductase M2 polypeptide EMBV3_42393 AGGTCGAGCTCTTATCCTCTCCCAGTCGAAGGAGACGGCGACCGTGATGCTGCAGATGAA Gene GeneID:100138046|LOC100138046:NM_001162915:5_cdna Constitutive 0 NULL GeneID:100138046 14 GENE LOC100138046 NULL coiled-coil domain containing 121-like EMBV3_34817 CCGGGCCAGAAGCCGAGCAGCTGCGCCACGGTTTTGAATGAGGAATGTGATCAGAACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20570 TGCAGGGCTGGGTCTGCTACGTCACCTTTATCTGCCAAAGACTTCTTCCCTTCCAGACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07848 TGGAAAAGAGATTGTTTTATTCAGAGGCACAGGAAGGCTCCAGTGACAGGCATGTACCAG Gene GeneID:100300457|LOC100300457:XM_002691967:21_cdna Constitutive 0 NULL GeneID:100300457 12 GENE LOC100300457 NULL hypothetical protein LOC100300457 EMBV3_02136 CCAGAAAGCCTTCTACCATCCGAGTCATGAAATCCCAGAGCTGTTATCCTGGCTAAAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42733 CTTATGCTGTATCAACCCTGCCCCGACTTTGGAACCGGCTGTATTCTGAGAAGCTGGATT Gene BVT0101_041207 + 1 EMBV3_25738 GK000008.2:86491829-86579158 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233239 1 XLOC_142721 NonCoding TCONS_00233239 XLOC_142721 NonCoding NonCoding - 8:86570463-86570801 - TSS174743 338 0.603550295857988 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000381364392370935 0 0 0 0 noncoding 0 0 0 0 -0.0306413390919612 0.765082906420189 0.0330030076104743 0.57517094127943 GCCCCCGCAAGCTGGCTCCGTAAACTTTGACATGCCATCATCATTTTTTCTTTTTTTTTTTTTTTGAGCATTTTCTTTACCATGTAATACATGGTCCAGGCTTATGCTGTATCAACCCTGCCCCGACTTTGGAACCGGCTGTATTCTGAGAAGCTGGATTCCTTTTCCCAGGCCATGACTTAGAGATCACGGTCTGGGAGCTGGGGGTGCTCTGAGATCCCAGTGGCCAGCTGCAAAACTGAACAGACAGAGCCAGAAACACATGATGGGCAATGTGTTCAAAACCTGACATATACAAACAGGCACCTCACTGTGCTCCCTCATATTCCCCGCTGTGG TCONS_00228552 TCONS_00228553 . 3' 114926 TCONS_00228552 TCONS_00228553 . 3' 115263 EMBV3_14176 CTCCCCTGGTGGCCTAGTGGTTAAGAATCCTCCTGCCAATGGAGAGAACACAGATTCGAT Gene BVV0102_112470 + 1 EMBV3_08456 GK000002.2:90090702-90139394 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27694 GACGCCAGAGAGGATCATTCATGTCTTCACAGAGTCCCAAAGATACCTGGGTCTTCTCGA Gene GeneID:539517|MYOCD:XM_002695810:152_cdna Constitutive 0 NULL GeneID:539517 19 GENE MYOCD NULL myocardin EMBV3_22425 AGTGTTTGGAAGCCCACAGTTGTGTTTGGTACTGATGGAGGGGGGAGGGAGATGGAATGA Gene GeneID:504250|CRMP1:XM_002688401:67_cdna Constitutive 0 NULL GeneID:504250 6 GENE CRMP1 NULL collapsin response mediator protein 1 EMBV3_07540 TGGACAGCACACTCTGGATTCCTGTAGGGGAGGACCAGTAGCAACCGACAACTGCAAATA Gene GeneID:281128|DSC2:NM_001166526:58_cdna Constitutive 0 NULL GeneID:281128 24 GENE DSC2 NULL desmocollin 2 EMBV3_10276 TGTGGTGCAAACGGCCTTGAAAGAAAAGGGGAAGCACCGGCCCAGCCCTGACAGCAATCT Gene GeneID:100296479|LOC100296479:XM_002691517:525_cdna Constitutive 0 NULL GeneID:100296479 11 GENE LOC100296479 NULL hypothetical protein LOC100296479 EMBV3_36003 GCTGAGTATGGTTAAAGCGGAACCTGATGTTAAAAAACTAGAAGAGCGACTGCAGGGTGG Gene GeneID:327714|NDUFA5:NM_175829:16_cdna Constitutive 1 NULL GeneID:327714 4 GENE NDUFA5 B13 MGC133631 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa EMBV3_34460 TATTTCATTTTAAATCATGTGATGCAGAATAGTTTTGCAATGTATATACAGTGGCAGGCA Gene GeneID:613824|LOC613824:XM_002684666:8_cdna Constitutive 1 NULL GeneID:613824 1 GENE LOC613824 NULL similar to CGG triplet repeat-binding protein 1 (CGG-binding protein 1) (p20-CGGBP DNA-binding protein) (20 kDa CGG-binding protein) EMBV3_19706 GACTTGGGTGGTAACTAACCCCGAGCCAGTGTGTTTCTTGTGTTGATTCTCATAAGCCTC Gene BVT0101_066696 + 0 NULL GK000029.2:12325430-12460187 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163108 TCONS_00163103 TCONS_00163104 TCONS_00163105 1 XLOC_099806 NonCoding TCONS_00163104 XLOC_099806 NonCoding NonCoding - 29:12335556-12359310 - TSS122311 2083 1 TCONS_00163104_3 108 0.241478636581853 4 0.912474213783522 2.70758596585974e-05 6.02117022343906e-05 0.000147517727106932 2.64629404047779e-05 0.00141599738742787 3.43370781851672e-06 1.0822209836354e-14 0.000333738455847129 4.16607264392081e-05 7.44504755037025e-09 1.02171392901849e-13 0 0 7.32991066165348e-15 2.85934862450369e-15 0 0 0 4.28587068266876e-25 0.000248215418465496 2.4463548949569e-15 0 0 0 9.70760673568373e-05 2.4044234857507e-09 1.3114860556399e-09 0 0 0 NM_001099035.1 GSTCD Bos taurus glutathione S-transferase, C-terminal domain containing (GSTCD), mRNA. 1e-35 156 93.40 0.0504080652904465 0 noncoding TCCCAGGAGCGAAGCCCAAGGCCAGGTCCTGCCCACTGGCTGCTGCACACAGTAGGGTGTCGCTCCAGGACCTTCCCCCAGACTGACTGGGATCTTGAGTTTTTGGAAGGATGCTCATAGAGCTAAAGTGCCATTCTCATCACACCTTATCAAGGGTGCATGACTTAATCACCGATGTTGATGTTGATCATGTCCACCTGGCTGAGACTCCATAAGTGGCCTCAACCCACTGAACCTGAATCTCCACGAAAACTCCCACCTCCCCGCTTCGGCCCACCCTGGCTCCTCCACCGCTGTTTTCTCTCCCTCCCCTCCTCAGTACCACTTTGTATGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGCAACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTCGGATTTTCCAGATCCTCAATTAGAAAGGCCAAGAACTGGTATGGCAAGTAGAAGTCCTCTCCATGGCAGAGGAGACAAGTGACAACTTTCATCCTATACCAGATGCGCCTCATCGCTGCAAGCAGCGTAGTGCTGTCCAGTTTCAGCGAGAGCTGAGGGCGCTAGGCACCTTGAATAGATGTTCTCAGCGCAGCAGCAAATATGAAACAGGAACGCCTATGTGCCCTTGGAGCTGTCTGGTTGAGAGACTAGGATTTCACATTGCCCGTCAGGAGAGACCTGCTCTCCACTTCCTGCTCTGGCTCCAGTTCAGTAGGGTGGACGGGGGTGGGGTTGGAGACAAGGAGGCCCAAGCAGGTGGAGGGCTCCCAGCGAAGCCACGCAGATGACTTGGGTGGTAACTAACCCCTAGCCAGTGTGTTTCTTGTGTTGATTCTCATAAGCCTCCTTTGTTCTTTCCCCTCTGCAAACAAAGAGGTTGGAATTTCTGAAAACCATAATGGAAGAGGACTAATGGGTCTTGGCAGAGATGGGAGACTAAGTCTTTTGAACAGTGGTCCTCCAAAGGGCAGACACAAAATCATATATATAGCCACTTAAACGGGTGTTTTGAAGATGACCGCATAACATGGGGAAACAAAATAAGCAGGCTACAAATTGCCTAGAATGTTGCAGCCTAATCCTGCTTTATCTCTAGAGCCTGATGATTTTTAATTTTAATTTGTTCCTCTCTGCACTTCCTAACATATCATTATTTTAAGTAAAGGCTTTTAAAATTAAGAAAAAATAGTAAAACATAATCCAGATAGTGAGCAAACAACTATCCCAGGACATCACCATTCAGGCTCCCCTGTGCCCTGAGCCGCTGCTCGGGTTCCCAAAGCTCCACCGTGGGGTCCCCACCAGCCCACCGCAACAGGCTCACCCTCCCCCCGAGTCAGCACGTGTTCCCACAGTAACTCTGGCTACACCTGCTCCTCCAGGGAAGGTGCCAGCAGGGAGGGGGGTGGCTGAGATGGGCAACAACTCTGTGGAGGACAAGGAGAGGAAAGCAAGGAAAAGCAAGTGCCTGCATGCGTTTTAGGCAGAAAATGACAGCAAGATGTTCTAGGTCACATCTGTCCCTGGGAGGAGGTGGCACAGAGAGCATCTGGAGAAACCTCCTCAGACATAGGCTCAAGGGCGTCTCTGTGCAGTGCTAAATCTGGCTGCGGTATCTCCATGGGAACAAATACAGTCCTCATCTTAAAACCTTTTCTAATGAAGGACGATCCATGGCTAATGTGATTATCTTCAATATGTCTGTGAAAGTTTTCAGAAAACAAGGCTGGTGGCCAGGAGAGCTTGGTGACTCTGGTCTTACCGGTTTCTGGCCTAATTTTGTCAACTCACCAGATAACGTGATCTCTCTGGCAGGAACTCACACAAACAAACTTCCAACAGACTGAGAGCTAATGGGAGAAAGTCAATTCATTCATTAAAAAGTAAAATGACATTAAATAGAGACATGATCATATGACCCAGCAATTCCACTCATAAGTATATTACCCCAAGAGAAGCCAAAGCATACATCCAGACTAAAATTTGTATGTGAAAGTTCATAGCAGCATTATCCATAAGTCAGAAAGCAAAAGCAACTCAAATGCCCATCAACTGATGAATGGATAAA TCONS_00163096 TCONS_00163097 TCONS_00163098 TCONS_00163099 TCONS_00163100 TCONS_00163101 s 3' 11411 TCONS_00163096 TCONS_00163097 TCONS_00163098 TCONS_00163099 TCONS_00163100 TCONS_00163101 s 3' 11411 EMBV3_34175 GCGAGCACCTGAAACCTAGACAGAGAAAGACCTATAACCTGCATGAGACTTCCCCTTTCC Gene BVT0102_134060 - 1 EMBV3_35728 GK000022.2:56217922-56220080 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129210 TCONS_00129214 TCONS_00127536 TCONS_00129215 TCONS_00129209 TCONS_00129213 TCONS_00129212 TCONS_00129216 TCONS_00129211 2 XLOC_078067 XLOC_077669 Coding TCONS_00127536 XLOC_077669 NonCoding Coding ATG7 22:56039459-56220179 j TSS95363 2598 3 TCONS_00127536_5 127 0.0904541955350269 5 0.985651757701183 0.00445866204183548 0.0013905200251731 0.002850700695802 0.000526811416588081 0.00097109274202583 0.000760488523630153 0.00177441504909827 0.000974748375319702 0.000759410790953343 7.77472735486197e-06 1.18838920860526e-10 3.33432024408377e-74 6.5252556287516e-06 5.2765845608117e-92 0.000469333706799652 0.00101965333494222 0.000105746194925502 0.00123401318984324 0.00359219993157835 0.00260275418113532 0.00139085734975207 0.00086635926133679 0.000673820821275999 0.000558493338771399 0.00361397750816965 0.00287831995700629 0.00279002401762177 2.65370960331466e-38 0.000128801628158875 0.000205260009748561 XM_005223080.1 VGLL4 PREDICTED: Bos taurus vestigial like 4 (Drosophila) (VGLL4), 0.0 3238 100.00 0.690531177829099 NM_001284390.1 VGLL4 Homo sapiens vestigial like 4 (Drosophila) (VGLL4), transcript 0.0 845 81.28 0.342956120092379 0 noncoding 1 1 1 1 -0.246463405197153 0.317126650206674 -0.0219399853616304 0.648799774930568 TGTGCTCTGCGGCTTTTTGCTTTGTACGTCATCTCTGCGCGCACCTTTACTCCTCCTGAGGACGGGAGCATAAGGCTCTGTTCAGTTCAGTCGCTCAGTCGTGTCTGACTGTTTGCGACCCCACGGACTGCAGCACGCTAGGCCTCCCTGTCCATCACCAACTCCTGGAGCTTGCTCAAACTCACGTCCATTGAGTCGGTGAGGCCATCCAACCATCTCATCCTCTTTCGTCCCCCTCTCCTCCCACCTTTAGTCATTCTCAGCATCAGGGTCTTTTCAAATGAGTCAGTTCTTCGCATTAGGACCTGTTAGCCAAACCCAAATATGACCTAGTGCCTCGTCTCACTGGTGTTTGACAAGAGGATTTCAACTCAAGCTGCTTCTGCCCTTCATGGGGCCAGGGGTGACGGCACGGAGCCAGGAAGCTGCAGATACGGGGATTTCTGTCACGGTTTGATAACGTCCTTCCTGTCAGCCTGGCCTTTGACAAATGCACGGCTTGTTCTTCCAAAGTTCTCGATCAGTATGAACGAGAAGGATTTAATTTCCTGGCGAAGGTGTTTAATTCTTCGCACTCCTTCTTAGAGGACTTGACCGGTCTTACATTGCTGCATCAAGAGACCCAGGCTGCTGAGATCTGGGACATGAGTGACGACGAGACCATCTGACACGCGCGCCTTGCGCTCCGAGGCCGCCGCCCCAGGACTGCGACTTGGCCCCGCGTCCCCACCGCTAGAGGCCCGGCCTGCCTCCGCGCCAGGAGCCCCTGGTGTCCTCCATTTCTGACAGCTCCTCATCCCACCGGAAAAACAGGCCACAGAGAATGGTATATTACAGATTTACAAACACGGAGAGAATGGTCTGAACGCACTGCGGATGGCCTGGCTCTGTGGAGAACCTCTCTGTGCCCTGAGGCCGGGGAGTGTCCCCCTGCCCGGGGCCCCTCCCAGGCGGCCGCTCCCAGCAGGGACCCGGCCCTCAGCGCTCCAGTTCCCCCTCCCCAGCGATGTCCTCGCTGGCGGGCGCCCGCCGAGCCCCGTTCTGCACAGAGCCGCCGGCAGTGGGTCGTTTTCCTGGGCGACGCTCAGTAGCCTGTAGCAATAACAAACTAGTGGCTATTAAGGCAGATGCAGTGTTCTCATAGAATAACTGTGTTCCTGCACTTTTACAGACAAATCTAAGACGAAAAAAAAAAAAAGATCAACTTTTTTTTCCAAACAAAAAAAAAAAATGAATGATTACAATAGGAAAAGGGAAAAATTAAATAGCTACATATCATTAACAAATTAATTGTTCTTCAAAAAATACCTACAAATTTCTCTGTACATTCTTTACGCACAGCGTAATGATGGTCTTAAAGTTACCTATATAAAAAAAGTGTTCTCGATGATTTTTTTTTCCTACAGAAAATATAGGGGCCTGGATGCAAAAGCCTGGAAGCCCAGTGAAGTGGGAGGGAAATGCGTGCGGGGTTGTGGGGGTGGGGGGGGGGGGGAGACGCCTTCCTCCTGCCTCTTCAAAGACCTGCAGCCCCAGGAACCCAACGCCCGCCTGGTCACCCAGTGCCAACTGTGTAAAAGTCACCAGCCAACCTGTATCTCTCTCCTACTGACGACCAGGCCAGGGGGCACCCAGAGCCCTGGTGGGCGGGGCGGGAGGCGGCGCCCGGAAGGGGCGGGGCCCAAGAAAAGGTTCCCGGACACAAAAGCAGCTGTCGAACATCCACAGCTGGGTCTGTCATGCTTGCTTCTTCGCCTAATTCCTAGTTAGTAGCTATGACTATAGCAAACAATAATAAATGCAGTAATAACTGTATAAAGTCAGAGGAATGTATACTGCCTTGGCCCCAGCGTACGAGAGGAAGCACACAAAAACACCGCGTCAGATTGTCGGGCATCTGCTGTCCGGCCAAGGGAGCAGAGCAGTTTCTGTATCGAGAGGGAAGCTGGGAGACACCAGTCCCAACTCCCCTGGGAGCGCGGGAGCAGGCAGGGAGGCAGAAAATAGCCGATGCTGTCAGCCTGCGGCCACCGCTCCAGCATACTACTCGGCCGCTGACCAGCCACTCGCCCGCCCGCGTCCAGGGCCTGCCAGGGAGTAACGTGGATATCAAATACAAATCTTAGAGTACAACTGTACCAGCAGTAAGTATATCTAGGACTGTAACTGACAAAAATAAAACGCATTCTGAAAAGAAGCTAGTTAAGTATTAAGGATTTTTTGTTTACTGTCTATACAGTTAATAGAAACCAGCTATTTTTATCCATTAAAACATGCATCACTGTTGAAAGCACTACAGGCTCCTCCAACTTCAGCTCTAGCCTAACAAACTGCAGTGTTCAGAAAAGGTAAAATGCCCGTGATTGGTAAGAGTCTGCAGTCCAGTTGCAAGCACCTGAAACCTAGACAGAGAAAGACCTATAACCTGCATGAGACTTCCCCTTTCCAAAGCGGTTTTGTCTAAATTAAAAAACAACAAAAAACACAAATGGTCACAAATGTCATCCTGAAACCCTCTGTTTCTCAGCAGTTTGCCCTCAGAGCACCAGCGTCTCGCACAAAGCTGTCAGGCAGGCCACTCGAGTCCTCCTCCCATAG EMBV3_21698 CAGAAAGCAAACTAAATAGTCAAAGCCGGGAAAACACCATGCTCCGGGCTAAAATGGCAC Gene GeneID:509483|CEP135:XM_002688263:191_cdna Constitutive 0 NULL GeneID:509483 6 GENE CEP135 NULL centrosomal protein 135kDa EMBV3_12952 AGCTCAAGGAAAACATACACTTTTGATATGATATGGCCAAACCGGCACTGGAAAAACCTT Variant GeneID:508467|KIF11:XM_002698376:4_cdna 234^331 1 EMBV3_35354 GeneID:508467 26 GENE KIF11 NULL kinesin family member 11 EMBV3_34725 CTTTTCACAGATTGGGGTAGTGGCTTCCACGTTGTCGCTGTCTGGAGTTAGGCTTGAGAA Gene GeneID:507149|CDK8:XM_002691842:112_cdna Constitutive 3 NULL GeneID:507149 12 GENE CDK8 NULL cyclin-dependent kinase 8 EMBV3_13343 GTCAATTTCCTGCTGATAGGAAGCAGGGAGAACATGGGCAGCTGGGACTCACCAAGGATT Gene GeneID:504235|STEAP3:XM_002685438:46_cdna UTR3_Alt 2 NULL GeneID:504235 2 GENE STEAP3 NULL STEAP family member 3 EMBV3_08418 TCAGAGCCAGAAGGGGGTCTTGATGAGAGTGGAGAGCACTTTTTTGATGCCCGTGAAGCA Gene GeneID:100337015|LOC100337015:XM_002693083:427_cdna Constitutive 1 NULL GeneID:100337015 15 GENE LOC100337015 NULL Rho guanine nucleotide exchange factor (GEF) 12-like EMBV3_18923 TCCAGTATAAGCAGTGAGTGTGGCCTAATGGTCTGGACCCTCATCCATCCTTTGCAGAAG Gene GeneID:408016|CASP3:NM_001077840:13_cdna UTR3_Alt 2 NULL GeneID:408016 27 GENE CASP3 NULL caspase 3, apoptosis-related cysteine peptidase EMBV3_17391 AGTTTACTTACATACACACACGAAGATCTAAAAATGGCCTTTAAATATATGAAAATATGC Gene BVV0102_102080 + 0 NULL GK000019.2:38255682-38314467 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06130 CTGTCCTGCTATCGCCCCATCTTTTCATATAAACGGACGGCTAGAAATCATTATTTAGGG Gene GeneID:100302527|LOC100302527:NM_001163442:2_cdna Constitutive 1 NULL GeneID:100302527 X GENE LOC100302527 NULL hypothetical protein LOC100302527 EMBV3_29259 TATTGGGGTCTAATAGGGGGCGGGAGGGTATGGAGCACAGGGTCAAGGAGGTCTTCATTA Gene GeneID:504977|GP1BA:XM_002695795:355_cdna Constitutive 0 NULL GeneID:504977 19 GENE GP1BA NULL glycoprotein Ib (platelet), alpha polypeptide EMBV3_35583 CTGTCCTGACACTGCCCATGAGGCCCCCAGCTGAACAGCTCTGCCACCCTGGGTCCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21407 GCAAAGACCCCAGTGTTTGGTGAAAAGTATGGCTGGCCCCCGCTCTAAGTGTCTTGTGAT Gene GeneID:528174|GPR133:NM_001034564:111_cdna UTR3_Alt 3 NULL GeneID:528174 17 GENE GPR133 NULL G protein-coupled receptor 133 EMBV3_17850 GAAGTCATCACCTTACTGTTGCACTTCCACATTGTGTTCTGGAGTCATTGTGAATGAGTC Gene GeneID:506860|PTS:NM_001113537:47_cdna Constitutive 1 NULL GeneID:506860 15 GENE PTS NULL 6-pyruvoyltetrahydropterin synthase EMBV3_01461 ACAGCATCATGAGTGAGCGACAAGGAGCTGGGACAACCAATGGAAAAGACAAGCCATCTG Gene GeneID:768324|PCP4:NM_001078136:48_cdna Constitutive 0 NULL GeneID:768324 1 GENE PCP4 MGC142709 Purkinje cell protein 4 EMBV3_32069 TAAAGTGTCTCTTCTGCTGCTAATGGACGATTGATGTCGTGTCTCTGTGACCCTCGCACC Gene GeneID:527458|KLHL26:XM_002688529:115_cdna Constitutive 0 NULL GeneID:527458 7 GENE KLHL26 NULL kelch-like 26 (Drosophila) EMBV3_41924 CCTTCATCCCCTCACTGAAGTATGTGCAGTGGTCTTTACCCTTCATTGTCTTCGGAGCCA Gene GeneID:512417|SLC22A15:XM_002686101:97_cdna Constitutive 0 NULL GeneID:512417 3 GENE SLC22A15 NULL solute carrier family 22, member 15 EMBV3_23439 GAAAGAAATCGGTTCTTCCACCTCCAGCTCCTCAGAAACGGTAGTCAAACTGCGTGGCCA Gene GeneID:530910|FRMD6:NM_001102133:88_cdna UTR3_Alt 2 NULL GeneID:530910 10 GENE FRMD6 MGC143214 FERM domain containing 6 EMBV3_16021 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02581 CAGGCGTGGGAGAGAGAAGCCAATTTTGAATGGTGAATTGAACATAGTCTTAGATATTTG Gene GeneID:338038|ATP6V0A2:NM_176637:36_cdna Constitutive 2 NULL GeneID:338038 17 GENE ATP6V0A2 NULL ATPase, H+ transporting, lysosomal V0 subunit a2 EMBV3_05571 GTCAGTAACCACTGCTGCTTTAAGAGATCAACTAACTCGGGCGCTAACTATGATAGGAGC Gene GeneID:784825|LOC784825:XM_002686641:22_cdna Constitutive 0 NULL GeneID:784825 4 GENE LOC784825 NULL similar to Leucine-rich repeat protein SHOC-2 (Ras-binding protein Sur-8) EMBV3_40661 GAGGCACCGGAAGCAGCCCTACATCCTCGACGACGAGGAGAACATTCACGAGAACATCGT Gene GeneID:538924|CDH20:XM_002697782:353_cdna Constitutive 0 NULL GeneID:538924 24 GENE CDH20 NULL cadherin 20, type 2 EMBV3_10284 GCTCCCAGGATGTTTGACAAGACGGAGTTTTTTGGAAGAACCTCATCTCACCATAGTTTT Gene GeneID:516420|USP46:XM_002688272:23_cdna Constitutive 2 NULL GeneID:516420 6 GENE USP46 NULL ubiquitin specific peptidase 46 EMBV3_17215 AGGAGTAGCTCTTGGAGCCGCTGCGGCCAGATCTTGAGTGAATGCTATGTGTTGGTGGGA Variant GeneID:616849|WIPF2:XM_002695964:288_cdna 95^324 2 EMBV3_07970 GeneID:616849 19 GENE WIPF2 NULL WAS/WASL interacting protein family, member 2 EMBV3_10967 GCATTAAGTCACCGTAGAACATAGGACTGTAACCTCAGTTCGCTCTGTGATGTCAAGTGC Gene GeneID:100139484|RAPGEF2:XM_002694421:41_cdna UTR3_Alt 2 NULL GeneID:100139484 17 GENE RAPGEF2 NULL Rap guanine nucleotide exchange factor (GEF) 2 EMBV3_16853 ACTTCAGCTAATTCAGGACAAAAGGAGGAGGAAAGCGTTATAATGTTGCAGACGTGTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18527 AGATTGAAGCCATAAAGCTGGCGGAACAGAAGCTCAAGGCGGAGAGGAGGCGGAGGGCCA Gene GeneID:512069|C1H21ORF70:NM_001046108:23_cdna Constitutive 1 NULL GeneID:512069 1 GENE C1H21ORF70 MGC137476 chromosome 21 open reading frame 70 ortholog EMBV3_12858 GAGAAGAACCGGAAAGAGAATGAAGACAGTTGGGACTGGGTCCAGAAAAACCAGTGACCC Gene GeneID:532127|ITGA9:XM_002696941:510_cdna Constitutive 0 NULL GeneID:532127 22 GENE ITGA9 NULL integrin, alpha 9 EMBV3_27967 TGCTTAAGAGAAGCAGAGTGAAGTCAGAACAGGGATTACACGAGCCCTCAAGGGTCTGCT Gene BVV0102_332503 + 0 NULL GK000014.2:16153298-16353387 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39350 TGTAACAGTAATGAGTGCTAAGTCGCTTCAGTTGTGTCCAACCCTCTGAGACCCTATGGA Gene BVT0102_306262 + 1 EMBV3_07351 GK000015.2:28940118-29000629 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22541 AAAGTTCGGTGACAGCAGCATCTTTGCGCCTCCTCCCTGTCAACATCTGTAAAAGTCCAG Gene GeneID:517505|C25H7ORF26:NM_001075754:200_cdna Constitutive 0 NULL GeneID:517505 25 GENE C25H7ORF26 MGC140552 chromosome 7 open reading frame 26 ortholog EMBV3_23367 TTGGGTGCATTCAGGCCATCTTTCTAACTACACTCACCTTCCAATTGCCCTACTGTGGCC Gene GeneID:100301320|LOC100301320:XM_002699128:202_cdna Constitutive 0 NULL GeneID:100301320 29 GENE LOC100301320 NULL similar to odorant receptor MOR83 EMBV3_08334 ATGTTGCCTTGCAGGACCATTTCAAGTGGGTGATGCCTGGGATTCAAATTTGCAACCAGA Variant GeneID:509439|NECAP2:NM_001015562:108_cdna 395^996 4 EMBV3_06729 GeneID:509439 2 GENE NECAP2 FLJ10420 MGC134076 NECAP endocytosis associated 2 EMBV3_19576 ATGTTGGTTCCGAGTCCAGGTGCTAGAGTGTGTTTAAGGCTGGGTCCTTGGGCCCTTTTT Gene BVV0101_019216 + 0 NULL GK000014.2:1523304-1531490 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00050962 TCONS_00050951 TCONS_00050958 TCONS_00050952 TCONS_00050957 TCONS_00050968 TCONS_00050967 TCONS_00050969 TCONS_00050950 TCONS_00050959 TCONS_00050954 TCONS_00050966 TCONS_00050970 TCONS_00050956 TCONS_00050955 TCONS_00050963 TCONS_00050953 TCONS_00050964 TCONS_00050961 TCONS_00050960 1 XLOC_031058 Coding TCONS_00050961 XLOC_031058 Coding Coding ZNF7 14:1515985-1526636 j TSS38118 4941 1 TCONS_00050961_8 695 0.0809552722121028 7 0.536713615023474 0.00305473044249992 0.0018299313410711 0.00168876636214009 0.00253315774062131 0.00164581346792448 0.00081228650356781 0.00148824063452078 0.00169300872599737 0.00198138905362813 0.000461861641116611 0.000249607921162722 0.000332711508984466 0.000621125928583219 0.0012434763930555 0.000599422828841237 0.00150341974799256 0.000383070557794596 0.00156795266856146 0.00241323175868978 0.0016211404535227 0.000410420505450781 0.00147132775399003 0.00101540286194892 0.000667209286172177 0.00179695310270848 0.000980894233980044 0.00160932755288636 0.000295795295656787 0.000253822322184078 0.000534538706901911 XR_237201.1 ZNF7 PREDICTED: Bos taurus zinc finger protein 7 (ZNF7), transcript 0.0 4511 100.00 0.505970451325643 XM_005272334.1 ZNF7 PREDICTED: Homo sapiens zinc finger protein 7 (ZNF7), transcript 0.0 1952 79.82 0.428860554543615 TCONS_00050961_8 sp|P17097|ZNF7_HUMAN ZNF7_HUMAN Zinc finger protein 7; 0.0 1111 79.83 0.966906474820144 6 coding 0 0 0 0 -0.0897507952574692 0.65838072801079 -0.0334580193230763 0.497899151779657 TCCGGCGTCGTCGCGCTGCTAAAGTCTCCGGCTGGCCCCAGGAGGGGACCCAGGATCCAGCACCGGGAGGCACATGCCTGCTGCTGGCCAGGCCCAGGTCTCTCAGCCAGGACACGTGGATTCCCACCCACCGAGCCTCATGGAGGCTGTGACATTTGGTGATGTGGCCGTGCACTTCTCGCGGGAGGAATGGCAGTGTCTGGACCCTGGCCAGAGGGCTCTCTACAAGGAGGTGATGCTTGAGAACCACAGCAGTGTGGCTGGACTAGCAGGATTCCTGGTCTTCAAGCCTGAGCTGATCTCCCGGCTAGAACAGGGGCAGGATCCATGGGTCCTTGACCTGCAAGGAGCAGAGGGGAGAGAGGAAGCCAGGACCACCCGGACAGATTCTACAGTTGGGACTGATGGTGAGCAGGACATGGACAGTTTTAAATCAGAATCCGGGGGGGTCATGGTCAAAACCTTGCCCCAGAACTTTCCTCAGAGTCCTGGCTTTGGAAACACCTCAGATCCTGAAGTCTGTTCACAGAGACAGCCAACCTCCCTCTTCCATAAAAACTTCTTGAACATGGGGACCATGGGTCCCAGGAAGGCCTTCACCGAGGACGAGTTCCAGGGTCATGGTGAGTGGGGAAGCAGTGGCCGCCTGGGTTGTCAGCCTGATCAAAGTCAGTGGTCCTTCGGAAGGTGCGATGTATGTGGCAGGAGTCTGCGATCTCCTTCAGATGCTGCTCTACACCAGGAAGTGAATACCCAGCAGAAACCCAACAGATGCCAAGAGTGCCAAAAACAGTTATCCGATTGCTTCCAGGGGAGACCTCTGAGTACCTTTCCTGGAGAGAAACCATATGAGTGTAGGGAGTGTGGGAAGGTCTTCAGGTTGTGCTCACAGCTTACTCAGCATCAGAGGATCCACACTGGAGAGAAGCCGTTTAAGTGCACCGACTGTGGGAAGGCCTTTCGCCTGAGCTCAAAACTTATTCAGCATCAAAGGATTCACACTGGGGAGAAGCCCTACAGGTGTGAAGAATGTGGAAAAGCCTTTGGGCAGAGCTCCAGCCTCATCCATCATCAGAGGGTCCACACGGGAGAGAGGCCCTATGGCTGCCGGGAGTGCGGGAAGGCCTTCAGCCAGCAGTCTCAGCTGGCCAGGCACCAGAGGACCCACACGGGAGAGCGGCCCTACCCGTGCCGGGAGTGCGGCAAGGCCTTCAGCCAGAGCTCAACCCTAGCTCAGCACCAGCGGATGCACGCTGCAGAGAAGCTTGAGCTCCCGAGAACCCCGGAGAGTCCCAGCCTGGGTGCACGTCAGAGGATGCATGTTCCTGAGAAGCCATTTAAGTGTGACGAGTGTGGGAAGGCTTTCCGGTGGGTCTCCCGCCTGAGTCAGCATCAACTGACACACACTGGAGAGAAACCTTATAAATGCAACAAGTGTTCAAAAGCCTTTGGTTGCAGTTCACGACTTATTCGCCACCAGAGAACTCACACTGGAGAAAAACCGTTTAAGTGCGATGAGTGTGGGAAGGGCTTTGTCCAGGGCTCACACCTCATTCAGCATCAGAGAATTCATACCGGGGAGAAGCCGTACGAGTGCAGTGACTGCGGGAAGGCCTTTAGCCAGAGCTCGAGCCTCATTTACCATCAGAGGATTCATAAGGGGGAGAAGCCCTACGAGTGCCTCGAATGTGGAAAAGCCTTCAGCATGAGCACACAGCTCACAATACACCAGAGGGTGCACACGGGCGAGAGGCCATATAAGTGCAGTGAGTGTGGGAAGGCCTTCAGCCAGAATTCCACCCTTTTCCAGCACCAGATTATCCATGCCGGGGTGAAGCCCTATGGATGCAGCGAGTGCGGGAAGGCCTTCAGCCGGAGCTCATACCTGATCGAGCACCAGAGGATCCACACTCGTGCCCAGTGGTACCGTGAGTACGGGAGCACCCTGGAGGCTTCCACCCACACGAGTCGTAGGAGAGTTAATACTGTAAAGAAACTTCACAAATGTAATGAATGTGAGAAAATATTCAGGTGGCGGTCGCATCTCATTATCCACCAGAGAATTCACACTGGAGAGAAACCTTACAAATGTAATGAATGTGACAAAGCTTTTAATAGGAGCTCAAGGCTTACTCAGCATCAGAAAATTCACATGGGCTAGACCACTTACCTTTACAAATGTGTATAAATGTGAATAAACCTACAGCCTTAATTTATTTGACATGGGATCTTTTACACTGAAGATCTAGAAAACTGGGGAAGATTCAGAATTGCTCTCTTAGGGAGTGTTGAGATTCCTACGTGGTGTATGTTTCTGCTGGCACGTTTGACCTTATCTCCTCCAATAAAGCTCGTGTCTCCATCAGGGTGACACGTGTAGCATTTGAGCTCTCAGAGGGATGACCCTGGACCTTGCGGACGAGGCGTGAGACGAGCCCTGGCAGCCCCACCGGCTGAGGGGGTGGAAGAAGTCACCCAGGACGCCTTCCTTAGGCCCCAGCCCAGAAGCAGCCTGTGGTTTTCTCTCCGAGAACAAGTGCCAGCCGTTCCAGGTGCCTGGAGAGGTTGGGACAGCAGAGTCCAGGATGTTCTCAGCAAGTAGACGGGACTCAACCCCCCAGCAGCTCAGCCTGATTGGCTGCTTCCCTGGCACAAGGTGTGTAGGTCGCAGCGCTGTCTTGGGACAGGATTGCCCCACCTGCAACTTCGGTGTGCTCCTGCCCTGGGTGGGGCACCATGCAGTGTGCATCTGCAGCAGCTGTAACCCCCCGCTTCACCCACAACTTGTGTCTGCAAGTCAGTGCAAGACGGCAGGGACCTCTACAGACACCAGAGGTTACGTCCCCACCTCAGCTGCTGTGCTGAACCAGGTGGTCACTGCCTTCAGAGCCTGGCAAGGTGGGCACCTCTAAGTGGGCCATATCTTAGGCCTTTTGAGCCACCTAACAGTGGGACAAGATCAAGGTCCTGGGTGGACATGCCACACCCCCACCCTCTGCTGGTGCTAAGAAAGTGGTTTGTCATCGGATGGGCCCTCCCCACAAGGGAGTCCTCCTGGCCACTTCCTGGTAATGACGTGCAAAGGGGTGCAGGGCCTCTGGACTCCAGGGTCTGCACCACAGGATGCTTGTCTTTCCTGACAGCACTTGCAGGCCAGCCAAAAAGGGCCCAAGGACCCAGCCTTAAACACACTCTAGCACCTGGACTCGGAATCAACATGGTCCTGTTGGGGCTGGCCCACTGTGTGCCCCGTGGGCCAAATGCAGGCCTGTGCCCACGTCTGTGAAGCCTGGTGATCAGCCTGAGGACGCTGGCCTGGGACCTCCACAAAACCTGAGCTGGAGTCAGTCTGTAAATGCATGCAGGTCTGAGAAATGTAATCACAGACAGCCAAGGAGGCTTCGCCAATGCAGCAGCTGCTTCTGATCTGACAGCCTCCTGGTTTTGCTTCCTGGCCGGTCGGCAGGGCTCCTGACCACGTGGGCTTGGTGCTGCTCACAATCCATGTGTGCTTGAATCACCTTCAGAATCTTCATGTCCCCGTTTACCTTGTAACAGGCCTAAGAACTAAGAATGGTTTTTACATTTTTAAATGGTTGGAGGCGGGTGGGGAAAGACTATTTTGTGACATTTGAGAATTATATTGAAATCAGATTTCAGTGTGACCAAATAAAGGTTCTTGGAACACAGCTGGCCCTTTGCTTGCAGGGTGCCTCTGACCGCGTGGCAGTCCTGCCTCCAGCCTTTGAGGTATTATTTTTCCTCTGTTCTTATGTTTTGTTCACTTAAATGTCCCAGGATAACCAAAAATTCAATAGAAATAAATCTTAAGCCCTACATTCCAGCCTAGAATACTGGCTGCAGAAGCATTGGGTGAGGAGTCTCCTTGGCTGCATCCACATGAAAAAAGTTTGTGGTATTTGTGTGTCACCTGACGACGTTGCATTCAAACTGCTGCTGCCTGGGTTTCAGATCCCAGAGCACGGAGAAGTGTCTTTCTTTCTTCTCTGTGTGCGCTGGGAGGAGAGGAGAGGGCTGCCTGCCAGGTGTGGGAGTTCTGGACTATTCTATCCTACTTCCAAGCTGTATTTCCCAGTTGGGGTTTCAGGAACAGTAAACTCATTTTAAGAATTTCTGGGAATTTCTTGGCACTCCAGTGGTCAGGACTCAGCTTTCCCCTAGATCCCACAAGATGCCCAGCATGGCCAAAGAGAATTTCTAGAATGCTCATAGAATAGATTTAAAATACTTGGGATTTCTTTCTCTTTTGGAGACAAATTAAACTCATAATTTTGACCTGAAATTTGTCTTCATTATCAGATAAGCTTTATGATACTTTGAGCATTCTGGAAGCTTCACTAATAAACTGGGGTGTCTGTGCAGAGCCCAGTGGGTTTTCACATTCGTGTGTCCCTTTGTGGATGTGGCTTGCACTCAGAGCCCAGGAGAAGTTTGTTGAATGAATGCTGTGTTTGAGGTACATCAGGCTTTGAGGTGAAGCTTTAGAGGCCCACAGATAAGAGAAAATGCTCCAGCGCCAAGTTTCCACAGAGGTCTACATAAGGTCAAACATCTGCTCTCTGCAAGGTCTTATTCTTGTCTGGGGACATGGGGGCAGGGCTAGCTCTGCAGTCTGAGGGAGCCCTACAGGCGTGCAGGGAGGTGCAGCATTTAAAGTCACCCTCACCCCACCTGGTTTTGCAAGGCCCTGGAAGTGAGAATGGTTTTTCTGGTTTTGGCTGTGCTGGGTCACAGTGGTGGCACACAGGATCTTTTAGTTATGGCATGCAGGATTTGATCCCCGACCTGGGATTAAACCTGGGGCCCCTGCATTGGGAGTGTGGAGTCTTAGACACTGGACAACCAGGGAAGTCCTAAGAATGGGTTTTAAATGGTTGAAACAAATTTTGTGATGTGAAATTAAAATTTAGTGTCCACAGG EMBV3_26469 AATCAGGAACTGGCCTACTTCTACCCTGAGAAGAGTCAAGTGAATTCTGAGGGACTCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21229 TGAGTCTAGGGATTCTAACGCCAGTCATGCTGTGAAGAGGTAGACACACTGGTGATGTGC Gene GeneID:505168|ANKS4B:NM_001075192:323_cdna UTR3_Alt 1 NULL GeneID:505168 25 GENE ANKS4B MGC138951 ankyrin repeat and sterile alpha motif domain containing 4B EMBV3_27445 TTCTCACCATTCATTCCCTCTGGTTGCTGAGGCTTTGGGTACAAAACTCGCAGAGCCTTG Gene GeneID:282358|SLC2A3:NM_174603:16_cdna Constitutive 0 NULL GeneID:282358 5 GENE SLC2A3 NULL solute carrier family 2 (facilitated glucose transporter), member 3 EMBV3_37710 TTATACAGGGCATTGGAACAAGCCAGTCTGTCGCCTCTGGGAGAACATCGCATTTCAACC Gene GeneID:534112|CNKSR2:XM_002700350:12_cdna UTR3_Alt 2 NULL GeneID:534112 X GENE CNKSR2 NULL connector enhancer of kinase suppressor of Ras 2 EMBV3_37823 GGGTGGTGGAGAGAGGTATAACATTCCAGCCCCTCAAACTAGAAATGTTAGTAAGAACCA Gene GeneID:783022|LOC783022:XR_083851:29_cdna Constitutive 0 NULL GeneID:783022 15 PSEUDO LOC783022 NULL similar to proline-rich nuclear receptor coactivator 2 EMBV3_32086 TGCTCTTGGCAGACCTGTTGGCACTGAGTGGGAGTCCCGGAGGAAAACCCCAGTGACTGT Variant GeneID:282295|ORP150:XM_002693131:570_cdna 208^301 1 EMBV3_04906 GeneID:282295 15 GENE ORP150 GRP170 oxygen regulated protein, 150 kDa EMBV3_21651 TGACAGCAGTTCCTGGAGGATGGACCTGGGGTGACTGTACCCAGTTACAGCAACTGTTTA Gene GeneID:515416|GLRXL:NM_001037604:8_cdna Constitutive 1 NULL GeneID:515416 7 GENE GLRXL GLRX MGC133817 glutaredoxin (thioltransferase)-like EMBV3_01053 GGTATGATCGTCATCACGTCCATCCTGGGCTCCCTGCCCTTCTTCCTGCTCATCGGCTTT Gene GeneID:100336102|LOC100336102:XM_002687982:36_cdna Constitutive 0 NULL GeneID:100336102 5 GENE LOC100336102 NULL uroplakin-3a-like EMBV3_29577 AGAGCTCTTTATACGTTTGAACCCAGAACTAGTGATACCAATTGGTGGAAAGGTACCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18516 GCTGCTCGCGGAGGTGCTTCCCTCGCTCGAGGCTTGGAGATTCCGGAAATCTGCTGGCGT Variant GeneID:617018|RNF4:NM_001046589:34_cdna 91^131 3 EMBV3_13731 GeneID:617018 6 GENE RNF4 MGC137906 ring finger protein 4 EMBV3_20710 GTGCGTAGTGAGTAGAATCCTGATGCTCATTTCTACCTAAACCTCCACCTGTTCTACCTG Gene GeneID:539171|PDZD3:NM_001034664:187_cdna UTR3_Alt 2 NULL GeneID:539171 15 GENE PDZD3 MGC129076 PDZ domain containing 3 EMBV3_23888 GGCTACATCATCCCAGTGAAGTATCCTTTCATGATCGGGGCATGCAATAGCTTGAGGATT Gene GeneID:281717|HAPLN1:NM_174288:12_cdna Constitutive 0 NULL GeneID:281717 7 GENE HAPLN1 CRTL1 MGC179334 hyaluronan and proteoglycan link protein 1 EMBV3_40956 CTTAGTTGGAGAGGTGGCAGATGGAGCCAGTTCTTCTGGTGGGAAGTGAGAGACACTGAT Gene GeneID:506310|GCDH:NM_001045939:29_cdna Constitutive 1 NULL GeneID:506310 7 GENE GCDH MGC137369 glutaryl-Coenzyme A dehydrogenase EMBV3_00494 CTCTGTATTTAGAAATACAAAAATGAATACTGACCTTTTGAGTCTACCCTCATCTTCTCG Gene GeneID:506322|NRAS:NM_001097989:26_cdna Constitutive 2 NULL GeneID:506322 3 GENE NRAS MGC148418 neuroblastoma RAS viral (v-ras) oncogene homolog EMBV3_34777 CCATCAGAACCACCGGAGACGGACTTCGACACGCAAACTCTGCTCTCAGAAAATGTCATT Gene GeneID:536342|LOC536342:XR_084162:15_cdna Constitutive 0 NULL GeneID:536342 26 PSEUDO LOC536342 NULL similar to kinase non-catalytic C-lobe domain (KIND) containing 1 EMBV3_34518 AATTGCATTTATCAAACTGGCTGAAGCGTGGCTGCCTGTCAGGAGGTAAGTGCCTTTCCG Gene GeneID:509245|MED19:NM_001105348:13_cdna Constitutive 0 NULL GeneID:509245 15 GENE MED19 NULL mediator complex subunit 19 EMBV3_31594 CTAGAAAACTTGGTTTGTGGTGCACAAGCGTTGGATCCCTAAATAACTCTGCAGGTACCG Gene GeneID:505734|APPBP2:XM_002695642:74_cdna Constitutive 0 NULL GeneID:505734 19 GENE APPBP2 NULL amyloid beta precursor protein (cytoplasmic tail) binding protein 2 EMBV3_39337 CTCAGTGTCCTCGTCTGGACAGAGAAACAGTAGGGTGGGAGGGGTAGAGGAATTAAACAT Gene BVV0102_343842 + 1 EMBV3_12073 GK000005.2:114475164-114494261 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29707 CACTGACTCATAAGGTACATGCATCTCCAGCTTTCGCTGTTCTCAGCAGAGGTCGTACTG Gene BVV0102_159748 - 1 EMBV3_34559 GK000018.2:7549286-7719671 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088239 1 XLOC_053026 NonCoding TCONS_00088239 XLOC_053026 NonCoding NonCoding - 18:7704891-7705475 - TSS65585 584 3 TCONS_00088239_3 52 0.63527397260274 1 0 0 0 0 0 0 0 0 0 0 0 7.8396737883454e-06 1.83682603546947e-05 0 0 0 0 0 0 0 0.00060339146820006 0 1.27066177567079e-05 0 0 0 0 0 0 0.000340819965206998 0.00201780887315877 XR_228412.1 LOC101902820 PREDICTED: Bos taurus uncharacterized LOC101902820 (LOC101902820), 0.0 1054 100.00 0.998287671232877 0 noncoding 0 0 0 0 -0.0855231595766904 0.57081037937142 -0.000922341930180121 0.984422274505248 CCGTAACGTGCTTTTATTATTCATGATCAGATTAGGGAGACACATCCACAGGCATATGTGAAGTTTCAGCTCACACATTTTCACAGATGTATCCCAACACATGATGAACGTACTCCTTCATCCTCCTGGTCACCACTTCCGATGCTTTTTTTTTCCTTTCACCACTGCAGAGAAAGCTGCTGTGAACATGCCATTGATACCTGACTGGGTGTATTCCTAGGAGGGTTTCTTTGGGGTGCATGAGCAGGAGTGGCGTCACTGACTCATAAGGTACATGCATCTCCAGCTTTCGCTGTTCTCAGCAGAGGTCGTACTGAGCTGTATCTCCACCAGCTGTGCACGACGATTCGGTCCCTCCACACTCTTGCCAACCACACGTCGGATCCAACTTTGAAATGAGTTGGTCCTATAAATCTTTTTTCAATGGCCTGTCGCTCCTGCTGGTCTCCAAACTCTGTGTAGGCCAAGGCAGTGTTTCTGTCATTCACTCCCAGCCCCCAGACAACGCGTGGCACTTGGTAGGTTTCATGAGGGAGAGCTGGGCTAGATGCTGAGTTTTTTGAGGGCAGGGTCCCGGCCTTCTT TCONS_00085319 TCONS_00085320 TCONS_00085321 TCONS_00085322 TCONS_00085323 TCONS_00085324 TCONS_00085325 TCONS_00085326 TCONS_00085327 TCONS_00085328 TCONS_00085329 TCONS_00085330 . 3' 14192 TCONS_00085319 TCONS_00085320 TCONS_00085321 TCONS_00085322 TCONS_00085323 TCONS_00085324 TCONS_00085325 TCONS_00085326 TCONS_00085327 TCONS_00085328 TCONS_00085329 TCONS_00085330 . 3' 14775 EMBV3_07007 GTGGTGCTGGCCGTGTTTCTCAACGAGCAGGTGGAATTCTCAAGACTTCCAAGGAAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18807 GGTGACAGAATTCTCACCAAAACTTCGTCAGGTCATGCTGAATGAGATGCTGCTTTTGGA Gene BVT0102_319603 + 0 NULL GK000014.2:71818066-71868731 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053836 TCONS_00053835 TCONS_00053834 TCONS_00053833 1 XLOC_031839 Coding TCONS_00053834 XLOC_031839 Coding Coding INTS8 14:71792872-71848531 = TSS39642 2147 1 TCONS_00053834_2 714 21 0.961802436307449 0.000174516867975565 7.18818096274792e-05 0.000332081505637961 3.03787668167411e-20 0.000264571462936639 5.28820366320436e-24 1.07237860481489e-07 0.000102398031037673 0.000101641198803334 0.000539921438470304 1.67684912277727e-29 0.00057971112935158 5.615553748315e-05 1.24333530589487e-17 9.40551502521303e-05 0.00486755483763247 2.59062309940963e-07 0.00625290915970712 0.000277097072883744 0.000547379917247078 0.000251671840020704 0.0019292238893669 0.00228925053424182 0.00260510855810355 0.000413429974274141 0.000797184830033044 1.97737873980468e-07 0.000456598124816069 0.000444518802725315 0.000367915143811351 NM_001102556.1 INTS8 Bos taurus integrator complex subunit 8 (INTS8), mRNA. 0.0 3732 99.71 0.970190964136004 NM_017864.3 INTS8 Homo sapiens integrator complex subunit 8 (INTS8), transcript 0.0 2984 91.75 0.970190964136004 TCONS_00053834_2 sp|Q75QN2|INT8_HUMAN INT8_HUMAN Integrator complex subunit 8; 0.0 1367 95.95 0.967787114845938 0 coding 0 0 0 0 -0.074223093142381 0.569483873353867 0.0174398170022382 0.7245899012404 CAGGATGAGCGCGGAGGCGGCGGACCGGGAGGCGGCCACCTCCAGCCGCCCCTGCACCCCGCCGCAGACCTCCTGGTTCGAGTTCCTGCTGCAGGAGTCGCTGTTGGAGAAACACCTGCGCAAGCCCTGCCCGGATCCTGCACCAGTTCAGCTTATAGTCCAGTTTTTGGAACAGGCTTCCAAACCTTCAGTTAATGAGCAAAACCAAGTTCAACCTCCACCTGATAACAAGAGAAATCGTGTTTTAAAGCTCCTTGCTCTTAAAGTTGCTGCACATTTGAAATGGGACTTAGACATATTAGAGAAAAGTTTGTCTGTTCCAGTATTGAATATGTTGTTGAATGAACTGTTGTGCATCAGTAAAGTTCCTCCCGGGACAAAGCACATAGATATGGATCTGGCCACTTTACCTCCAACCACTGCCATGGCCATACTTCTCTACAATAGATGGGCAATTAGGACAATTGTTCAAAGTAGTTTTCCTGTTAAACAGGCAAAACCTGGACCTCCTCAGTTAAGTGTTATGAATCAGATGCAACAGGAGAAAGAGCTAACGGAAAATATTTTGAAAGTGCTAAAAGAACAAGCTTCTGATTCTATCCTGGTACTAGAGGCAGCCCTTAAGTTAAACAAGGATCTTTATGTCCACACAATGAGAACACTGGACTTACTGGCCGTGGAGCCAGGCATGGTCAACGGAGAAACTGAGAGTTCCACTGCTGGATTGAAGATCAAAACCGAGGAGATGCAGTGCCAGGTGTGTTACGATTTGGGTGCAGCATACTTCCAGCAAGGCTCTACAAATCCAGCTGTCTATGAAAATGCCAGAGAAAAATTTTTTAGAACCAAAGAACTAATTGCAGAGATAGGTTCATTATCTCTTCATTGTACCATAGATGAGAAGCGCTTAGCTGGCTATTGTCAAGCATGTGATGTTCTCGTACCATCCTCTGATAGTACATCTCAGCAATTGACTCCATATAGTCAGGTCCATATTTGTCTGAGATCTGGCAACTATCAGGAGGTAATAAAGATCTTTGTTGAAGACAACTTAACCTTCAGCTTACCTATCCAGTTCCGGCAGTCGGTCCTGAGGGAACTCTTTCAGAAAGCTCAACAGGGAAATGAAGCCCTGGATGAAATCTGTTTTAAAGTCTGTGCCTGTAACACAGTCCGTGATGTATTAGAAGGTAGAACTATTAGTGTTCAATTTAACCAGCTATTTCTTAGACCTAATAAAGAGAAAATAGACTTTCTTCTTGAGGTTTGTTCAAGATCAATAAATTTAGAAAAAGCTTCAGATACTTTGAAAGGAAACATGGCTGCTTTTTTGAAGAATGTGTGTCTGGGTTTGGAAGACCTGCAGTATGTTTTCATGATTTCTTCACACGAGCTTTTCATCACATTACTGAAGGATGAAGAACGAAAGCTACTTGTTGATCAGATGAGGAAGAGGTCCCCTAGAATCAATCTGTGCATTAAACCCGTAACTTCATTTTATGATATCCCAGCCTCAGCAAGTGTCAACATTGGCCAGTTGGAACATCAGCTGATACTGTCAGTGGATCCATGGAGGATTCGACAGATTTTAATTGAATTACATGGTATGACTTCAGAGCGTGAATTCTGGACAGTGTCTAATAAGTGGGAATTACCTCTTGTCTATAGTAGTGTCATCCTGGGAATTAAAGACAATTTAACAAGAGATTTGGTTTACATTCTAATGGCCAAAGGTCTACACTGCAGTACTGTTAAGGACTTTTCCCATGCTAAACAGCTGTTTGCTGCTTGTTTGGAGTTGGTGACAGAATTCTCACCAAAACTTCGTCAGGTCATGCTGAATGAGATGCTGCTTTTGGATATTTATACGCATGAAGCTGGAACAGGGCAGTCAGGAGAGAGACCTCCTTCTGATCTTATTAGTAGGGTGCGAGGATATCTGGAAATGAGGCTTCCTGATATTCCTTTTCGCCAAGTTATTTCTGAGGAGTGTGTGGCTTTTATGTTAAACTGGAGGGAAAATGAATACCTTACTCTGCAAGTTCCTGCGTTTCTACTCCAGAGTAATCCGTTTGTGAAGCCTGAAGAAAACAGTTTAAGAGGAATAATCTGTTTTGACTTCTGTCTGGTCAGATTTCCAGACAGAA EMBV3_02186 ACTCTGCATGCCCTCACCCCGCTCCTCTGACCACTGGACCTGAACGCCAGACATAGACAA Gene GeneID:528818|FUZ:XM_002695122:619_cdna Constitutive 0 NULL GeneID:528818 18 GENE FUZ NULL fuzzy homolog (Drosophila) EMBV3_32434 GTTTATCATGAGCTTTTGTATGTGCTAGACCCTAAATCTCAGCAATCTTAGGAAGAAGGG Gene BVT0102_238997 + 0 NULL GK000022.2:17916169-17961209 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126381 TCONS_00126380 TCONS_00126376 1 XLOC_077427 Coding TCONS_00126381 XLOC_077427 Coding Coding C22H3orf32 22:17909090-17921952 j TSS94806 1598 3 TCONS_00126381_4 70 0.323529411764706 5 0.876137158852344 0.00127743478986263 0.00117580820488211 0.00121549057747029 4.56598377979899e-05 6.84628185991352e-05 3.83697460477587e-81 1.31763033866801e-07 0.000352301920591603 0.000166157343441162 7.60296971091514e-209 2.44267746740601e-70 2.77250831320926e-247 0.00024430812922918 0.000198432507348647 1.78096990978081e-81 0 0 1.40385966147566e-07 0.000433228384471986 0.00165627574465089 3.31954045416596e-09 2.50089833475174e-18 0 0 3.90775462852823e-76 0.000148416889104429 0.00016834546001291 0 5.40766404505178e-06 0 XM_005196420.1 C22H3orf32 PREDICTED: Bos taurus chromosome 22 open reading frame, human C3orf32 (C22H3orf32), transcript variant X1, mRNA. 8e-106 389 100.00 0.133917396745932 NM_001256748.1 SSUH2 Homo sapiens ssu-2 homolog (C. elegans) (SSUH2), transcript variant 5e-58 230 83.72 0.133917396745932 0 coding 0 0 1 1 -0.211234152702517 0.495677001662972 0.0233541879134119 0.636082779038947 AACAAGCCAGATGGTGAGCTTTGGAGGATCTGCCACCTGTGATTGGTAAAGAAGGTCTTAGATTTGGAAGGAAACTCAGGTTTCTTTCATTTAAAAAGCAAAACAACTCCAATTCAAACTGGCTTTAGCAAAATAGAAAACCTGTAGGCCCATGCAGTGGAAAAGTCTAGGAATAGATTTCTGGAATGACTTGAGGTATAGCTGGATCCAGGTGCTAAAGCGATATCACCAGGAATCTGTCTCTGTCCTGCACTCTGCTTTCCTTTGTTTTGGCCTCATTCTCAGGCAGGTTATCTCCTGTGGTGGCAGAGGTGGCCACCAGCAGCTCCAAGCTTGGCAATCTCAGTAGAAAAGGATGACCCTTTCCTGATAGTCCCAACAAAAGTTCTGGTGTAGATCTCAACACACCCACCTGGCTCATGTATTAGTCTTTGTATCAGCCCTGTGCCACCTGTAAGGGCGAGAAGAAGCTGCTGCACTTCATCCAGCTGGTCATCGCGTGGTACGTGTGCCTCTCCGTGCCGTGGCCAGGTCGGGTGGTGGCTGGGGTGGGGCATGGCCTGCAGTGGCGCCTGCAGAGGAGGTCCACTTGGTTGGGGCTCTAACAGTGCAGGCGCCTGCTGGGAGATAGGAGTCCCGGGTCCTGAGTTCCCATGTCAGGAAAGCTTACACACATTCAGGGTTTTTCCCGTCAGGCACCTTGCTAGATCAGCACCTGACTAGTTTCCCCCCTTACAGGTGAGGCTGCTGAGGCCCAGAGAGGCTAAAGCGTGTTCCCAAGGTCCCAAGGGTAGCATGGCAAGCCCTCCTGCCCTGGGCTGCCTGATGCCAAGGCCATGTTCTTAACGCAATCCCCTGGCTCCGTCTCTCATCCTCCTCACTTCCAGGAAGAACAGTCTGTTTGAGTTTGTGTCTGAGCACCAGCTGGACTTCCCTGGGGAGCTGCTTGCTAAAGCCAGAGGAGAGACCCTGTTTAAGGACGAAAACACAACGGTGTATCCAATTGTGGACTTCCCCCTGCGGGAGATCTCTCTGGCCTCCAGGCGCGGCATCTCAGAACACAGCGCCGCCCTGGCCTCCCGGGCCCGCGTCCTGCAGCAGGGGGCAGCAGGCGCACACACATGAAACCTTGGAGGGTCTCTCCTGCACCAGAACCCTGTGGGGTCTCTCAGCAGTCCTCAGGCTATCGGGGAACTCGATGTGGCTCCAGAAATTTTCTTCAGAGGTGTAGAATATCTCCCGTTATTCATTGACTCCAGATGTCCCCAGGGATCTGGTAGAACTCCAAGCATCTACCTTGGGAGCTCATGGCCAAACATGCAGGAGACCCAGCCCAGCGTCGGAACTTTGTTACATTAACAGAACTGTTGTCTCTTCCCACCTCAGTCATATTACAGAGCCCAGTGGGATTCGTCTCGTCAGGCCTTGGCAGGTGCTGTGATTCTGCCCAATCCCCTTTTGCCTTTTCACTGATTGCCACTGAGAATAATGATGACAAATCTTTGTTAAGCTTTTACTAAGTTTATCATGAGCTTTTGTATGTGCTAGACCCTAAATCTCAGCAATCTTAGGAAGAAGGGACTTTTTTTCTTTAACAC EMBV3_29892 ATGTGTTGCTGCCTCAGCTCTCTCTGGCAGCTGATCTAGCATCTTTGATGGATAAAACGT Variant GeneID:514740|MRPS27:NM_001038108:118_cdna 84^161 1 EMBV3_02130 GeneID:514740 20 GENE MRPS27 MGC128369 mitochondrial ribosomal protein S27 EMBV3_01916 CCACCTCCTCAAGTGTAATAGTGGGCAATAATCCCAGGTTGTAGTGGGAAATGCTCAGGC Gene BVT0102_125542 - 0 NULL GK000023.2:31675127-31693731 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134942 1 XLOC_081596 NonCoding TCONS_00134942 XLOC_081596 NonCoding NonCoding LOC100848369 23:31681029-31687728 j TSS100505 3687 2 TCONS_00134942_3 117 0.30295633306211 3 0.4499850701702 0.000249249079807958 4.10166450404898e-05 5.63773298989923e-05 0.000189753848051012 0.000255968106863047 6.99812741459644e-05 0.000199493961875764 0.000856686704510246 0.000133475878124494 7.65939476522347e-05 2.76730586892798e-06 0.000179204449225757 2.14418798984322e-05 0.000166489433602546 0.000262341183101024 4.69290376214035e-11 1.9459266133602e-11 0.000229211634798877 0.000136823591662963 0.000180862412083908 1.11869339788794e-07 4.89505798620691e-12 1.81309345008392e-05 0.000100468364810399 0.000225123892240359 0.000262968519671869 0.000147055034451495 3.89488567746627e-06 1.1715175303133e-05 5.22435115706926e-05 XM_003583916.2 LOC100848369 PREDICTED: Bos taurus uncharacterized LOC100848369 (LOC100848369), 0.0 2361 100.00 0.354759967453214 0 noncoding 0 0 0 0 -0.196060573751286 0.216066343797389 0.0219344162648565 0.781755842815211 GTCGTGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCATCTCTTCTTACCACTCCTGAATTCCTGCCTTAGTTTGCTGGACATCCTGGATCCATTAAAGATATTAGGTAAAGTTTAAAAATAAAATGATCCACTTTCCTAGGGTCCAGTCCAATTTCTGATTTTAATGAACAAGTGACACTACCTCTCTGGGTCTCCACCTCCTCAAGTGTAATAGTGGGCAATAATCCCAGGTTGTAGTGGGAAATGCTCAGGCACAAAGCACTAGCTATACAAAATAAACAGGCGTTTTTGTTTTTTATATAATGATTGCAAAGCCCTTTCATACTTTTAAGACTTGCCGAAAAGAATTCTTGGGCCACCATCACTTAATCTTTGTGGCATCCTGGGTAATTCAATTATTTCTCTGGGCCTTCTGCTACTTCAAAAATATTAACTCAAGTGATCGACAAAGAAGAACATTCACTACTGTGTGGGGCTCTGCCCACTGTGTGGGGCTCAGCCCACGTATGTGGTTCTCAACCGTTGAAGCAAATTCCTAGAGATACTTTAAATAACTTAGGGAAGCTTGGTCTGCCCCAAGTTAAAAAGGGATGTAGATATAACGGAGGGGATCTCAGGCAGAGGTCTGACATTCTGAGGTTCTGCAGGTAACACAGAAGGGTCTTCTCCCCTGGAGGTGTCGTCAGGCATCACTTCTTTGGCCTTACGCAGGCCCACCACACCCCCAGATGAGCCACAGATGACTTTACCACTTTCCCCAAATCCACGGAGCACTCTCATTTCTCTCCAGATGAGGGTCCTGGGAGGGAGGAGGGGTTCAAGGTCCTCCCCCAGCTAAAGCAGGGCGTGCGGCAGGACCCGTGGGGGTTGCCCTTATGCTGCGGCCGCCCTTTCACATTTTCTGGTGGCCGGCCGCTGCATGGGGTCCAGGACTCCGCGAATTTCGCGAACGGGTGGGGGCTGTTCTATGAGGATGAGGAGAGGAGGGGGGTTTAAGTTACATATCCTTTCCCTGCCACTGTCCGTGACGTATTTCAGGAAAGTTCTGAAAGAACTAGATCACGAGTTTATTTCTTAAAAAGATGTTTTCCATGTTTTGTTTGTTGGTAAGGACGACTCGTCTTTCCTCATTTGTGATTCTTAAACCCGAAATTCGGTTGTTCACGAGACGCATGCACAGAGACCAGCAAGTAAGGAGCCGCTGTGAAGGCAAACCCGTCGCAGTAGCGACGCGACTCCGCCACAAACCTAAGGAGAGGAAATCTCGCGATGCGGGATTCCAGCGTCTCCAGCGTAAGCAACGCAGCTCAGAGCCAGGGCCCGCACGCCGTGTGGGGTCCCGCGACCTTTGCTCACCGCAGAAGCCCCGCCCACAAAGCTGGTCCCGCCCTGGCCGCCGCGAGTACCGTTACCGCCCCAGCTGCCCCGGCTACTAACTTTACAAGCCCTACGTGTACCCCACGCGTAACTTGTTTCTCGGCTTCTCTGATTGGCCAGCATTCCTTGCTCAGATCCAGCATCCTTTCACCTGAGAGTTCACTCCGCGTCCCTAGTCAAAGGCGAGAACTCTAGAAATGGAGCTGATCCAGGTGGGCTCGTCAGGTGACGAAGATGGAAACCCCAGGTCTGCCAGCAAGAAAAGAGAGTCTGTGGGTCAGAGACTATCCCCAGGGCATCCTTGGAGCCATGACCTGAAGAGAGACAAGCCACAGACTGGAAGGAGCTACATTTGCATCACCACTGGAGAACAATCACCCCCAAAGGATTTGGAGAGAAGTCTTCTCTAGTACCCACTTTTAAGTCCCAGTTGTATCTTCTTTTATTCTCCCAGCACTCAGTGTAGTTGAGGGAAAATTCTAGATTTCCCATAATATCTTGGTCATGAAAGTGAAATGAAAGTTACTCTGTCATGTCTGACTCTTTGTGACCCCATGGAGTGTAGCCAGCCAGGCTCCTTTGTCCATTGGAATTCTCCAGGCAAGAATACTGGAGTAGGTAGCCATTCCCTTCTCCGGGGGATCTTCCTGACCCAGGGATAAAACCTGGGTCTCCTGCATTGCAGGCAGATTCTTTACTGCTTGAGCCACCAGGGAAAAGGTCTTTATATATATGCAAGGCAAAGCAGATCAGGACCAGGAGAGCAGGCTGAGAGCTGTAAGACTCCACAGGTAAGGGAGACCTTGTAGAAGTGCAGAGCAGTAGAAGGTGCAGAGGTGAGCATTGCCATCAGGATGGGTCTTTGGGGCATGCCAGCATCTACCAGAGACCGGAAGGACTATTTAGAGAAACTGATAAAAAAAACTTTAGGTTACTTACTGCTGTTGCAAAGGGTTGGGCTTAGAATGATGGGTAAATCAGGCATTAACATCTTCATTTTACTAATGAAGAAATTAAGTTTAATAGAGAATAGGAGTGTTTGTTTTTGTTCCTGTTACAGTACTTAGTTCATAGTAGATATACAGCAAATATTTGTTGAGGGAATTCCCTAGTGATCCAGTGGTTAGGACTCGATGCTTTCACTACCTTGGGCCTGGGTGAGATCCCTGGTTGGGGAACTAAGATCAAGCCAATAAATAAATAAGTAAATAAATAGATAAATATTTGTTGAATGAGTGAATGATTCTCTAGTCTAAGACCTTTAATGGTTATGCCTTCTACCAAGAATTGAGAACTTTCCTAGTTGGTAGTATATAGAGGGGTAGGGGACTGGGAAGGAGGACAGACACCTTGCAGTTGGGTACAGAATGTATGTGCTCTCTGGCCCTACCACTCCCCATTGCCTTAGGACTCATTCCATTTACACATTAATGTCATCAGTCTCTCATGGGCTTTCAGTTTAGTTCAGTTGCTCAGTTGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCATGCCAGGCCTCCCTGTCCATCAACAACTCCCGGAGTTCACCCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCGCTGTCATCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGGTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTGAAAAGCACCAATTCTTCTGCGCTCAGCCTTCTTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATGGCCTTGACTAGACGGGCCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTGTCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCCCAAAAATAAAGTCTGACACTGTTCATCTGCATATCTGAGGTTATTTTGGGCTTAGTTGTGTGGAATCTCTTCCTATACTCCTGGAGTTGTCCCCACCCCTATCAGTTTGCCCTCTCCCATCTCCTTCCCATTGCCTTCTCCGCCTCTCCCTCCCATCCTGCCGTATCTATCCACGTATGTCTTCTGTATTTTTTTTTTTTAATGTTATAAGCATAAATCCTTAGGCAGTTGTGCATAATATGATGAACCTGGAGCCCTA EMBV3_00055 GCAATTGTACTGAAGGCTACGCACCTCCAAATTGTACCACGAGAGCCAGAATATCGCCTG Gene GeneID:520297|ADAM32:NM_001046250:79_cdna Constitutive 1 NULL GeneID:520297 27 GENE ADAM32 MGC133811 ADAM metallopeptidase domain 32 EMBV3_07298 AAGGAAATCAAGACTGTTCAGGGTGGCTGCATAACACTTCCTCTTGGCTGGCCTCATCTG Gene GeneID:516376|BBS12:NM_001100375:20_cdna Constitutive 0 NULL GeneID:516376 17 GENE BBS12 NULL Bardet-Biedl syndrome 12 EMBV3_17232 GAAGCCAGACGGGTTCTGATCTGCATAAAATCGGAGGTCACATATGGGGAGCTGAGTTGG Gene BVT0102_354405 + 0 NULL GK000011.2:46639762-46699165 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25029 AAGGAGAAAGACCTGGGAAACATAGGGCTCAGAGGGGTCCGCACCACAACCTTATTTCGA Gene GeneID:533179|MGC148355:NM_001081531:26_cdna Constitutive 1 NULL GeneID:533179 9 GENE MGC148355 NULL UPF0708 protein C6orf162 homolog EMBV3_32649 AACATTGCTTTGGGAGGCTGAGAAGCCCCATTTTCCACTTCAATAATGTAGGGTAACCAG Gene BVV0102_390145 + 0 NULL GK000026.2:11161386-11278860 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05468 AGGGGTATTGATGGAGGCCAAGTGAGCAAAATGCAGGACCCCGAAGAATTGACCCAGGAA Gene GeneID:768083|USHBP1:NM_001077137:128_cdna Constitutive 0 NULL GeneID:768083 7 GENE USHBP1 MGC139874 Usher syndrome 1C binding protein 1 EMBV3_03637 CTGCATTTCCCCACTTGAAAAATAAGTGAAACTGTAGACGTGTGATTCCTGGCCATGCTC Gene GeneID:511607|HGSNAT:XM_002698729:184_cdna Constitutive 0 NULL GeneID:511607 27 GENE HGSNAT NULL heparan-alpha-glucosaminide N-acetyltransferase EMBV3_35997 GAGACTCAATCAGAAATGACTGGAGTGGGGAGAGGGGCACCAAAAGAGTCAATAATCCCA Gene BVV0101_005186 + 0 NULL GK000003.2:104096451-104112926 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41715 CGCGTGTTAGATCCACGTGCCCAGTCCAACGTACAGAACCTACAAGAAGATAACAAGAGC Gene BVT0102_274010 + 0 NULL GK000006.2:16006083-16067020 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204497 1 XLOC_124458 NonCoding TCONS_00204497 XLOC_124458 NonCoding NonCoding - 6:16008206-16015461 - TSS152968 5713 3 TCONS_00204497_10 91 0.064064414493261 2 0.212710228839261 0 0 0 0 0 0 0 2.07062322164116e-06 4.14325121508429e-06 0.000534387245109532 0.000195941267645666 0.000145518396248493 1.15514541554515e-05 0.0004816800315963 0.000111211834247144 0.000564014554146198 0.000820960547734827 0.0010079392446234 0 0 5.31372169364335e-07 0.000261081812374689 0.00116582544520416 9.39030725806896e-05 0 0 0 0.000171491430138352 0.000112166813180813 0.000162066088713311 NM_001099095.1 GZMA Bos taurus granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) (GZMA), mRNA. 2e-43 183 80.48 0.0364081918431647 NR_027898.1 COL6A4P2 Homo sapiens collagen, type VI, alpha 4 pseudogene 2 (COL6A4P2), 2e-19 104 76.62 0.026080868195344 0 noncoding 0 0 0 0 -0.0593985110073968 0.677881850971487 -0.013855009072375 0.769861647410362 ATAGAATTCTTTTACATATTTGATTTGTCAAGAAAAGATTAGAGATCAATTAGAATTAATCTGAGATTTAATTTATGACAATTTAACATTTTAATATTTTTGAACCCTAATTTTGTGAACAAAGTTTTAATTATACTGTTTGATCAATTCGCATTTATTGAACATCTACTATATAGCAAGTACTATGCCAGGCTCCCACAAAAAGCTTAAAAGAAAATGACCCCCGAAATCTTAACTCACATTAAAACATCCCACATGGTAATTGACAAAGGCATAATATGGGGGGAAAAATAGTTTTCTACAATGGAATATTACTCAGCCATAAAAATAATGAAATAATGCCATTTGCAGCAACATGGATGGATTAGAGATTGTCACACTAAGTGAAGTAAGCCAGACAGAGAAAGACAAAAGTCATGTGATATTGCTTATATGTGGGATCTAAAAAAAAGTGATACAAATGAACTAATTTACAAAACAGAAGTAGAACCATAGGTATAGAAAACAAGGGGACAAGCAGAGGATGCTTTCTCCTGGTTACCACAGGAGAAAGTCAGTGGATAAATTAAGAGTTTGGGAGTAACATATACAAACTACTATTTTTAAAAAAATACTGCTAAGCATCTTTTGCAGCACAAATACTGCCAAGATAATAACAATAGGATATAACACAAGAAAATTAAATGCTTTTTTAAGTGGAAAAATTCAGAGAACTCACATTAGTATATAAACTCTACACAGGACTATTATGTTTTCTCCTGCAATGTATAATTTTTACAATGTGTACAAACCCACAAGTGATAGTTTCAGGCAGAGAAGGTACTTCCAAAATAAGAAGAGTAAACTGAATTGAGATTTACTACTTTGGTAGTCATAATGCTAAGGTTAATGCTGCCTGGGATGAAAGGAGTGTGCTCACCGAACCTTCCAGGATACCCAGGATGCAATGCGGCTTTTTAAAAGAATGTGCGCAGTGCCTGATGCTAGGAAAAGGCAGACTCCTGTATCGCGTGCTTTACCTATTGGCTCTGACACATTTACTGTTTATTCAAGCACTCCATATTTATAAATACAAATGGTTTACAAGAAGACCCTCAATTAAATAAAACATTGCCTATCTGGAAGAGTAAATACTACAAACACTCTGAAGCCTTAATTCAAATGGGGACAAGCAGAGGATGCTTACTCCAGTAGCAGCTAGAATTCTGGGGAGAGGCTCCAGAGATGGGCGAAGGGCAAAATAGGAATACATGAAGAAGGCAGGAAATAATGGGGAGGTGAAGAAAAGGGATGTGGAGAGATACTGAAATTCCACGGATGAGGCTGTACAGTTAGCTCTTCCTGCTTCCCTGTTCCCTGACAAGGCACTGCACGTGATGCAAGGCCTGGCAGAGATTTGGCGTTGCGAGGCTGCTCCAGCCACTGCGGCCTCATCTTCTCTCTGCCATCACTGTGGCCCTCACTCAGATTCCTTTCTTGTCAAACTTGTATCCAATCACCCAAGCCCTGTAGTCTATGACCTCTTGGTCAAACTGTCTGTTACCCAGGACACAAATAGATTGAGGGTGTCAGATAACATGGTAATTTGGTGAGGGAGGAGATAGTGGGAGGAGATAGTTGGAGCACTGCAATACCCTTTATAATACCCCTTTCCCCAACCATACACATCTTTTAAAGTATTAATAAATGTCCTTTATCCATCTATGTTTCTCTGTATCTCTAAGTCACCAGAGGGCAATTGAGCATGACTCCTACCGTTTAAAAAATTCATTTCCTTTCATCTGTTCATTCTCTCTGGGAAGCTAAGGGTTAGAACATTTGAGTCAATTCTCTTTTTCTTGGGGGAAGAGGGGTAACACAAAGCTGGGTGATGACAAAGTGGGCTGTATTGCTCGATGGGAATCACAAAGAATTTTGTGTGCACTGAAGTTAGAGCTGTGACACTGCCTGAAGCAGTGGACATCCTGCAACCACATCTTAAATTCAAAGCCATTTCTTCTGGAACTGATTAGTACCCAACTAATACATATACATAATACTCCCACATACTTGATGCCTGCTGATTCTCTGAAAAACCTTGTTCACCATTGTCTCAGTTACCACCCTCCCCCATCCCTGGAAACTCTCAGTTTCAACATGAACACACTGAAGGAGAAGCAGTGGCCTTTGAAGAAGCTAGGACATGACCACGAGAGTAATGGAATGATGCAGAGTTCATCCCAGACATCCACGCCACCACAGCCACTTCATCACACACCCAAACACAAAGATTTGGGTGAATGCTCTCAGTAAAAATTATGAGCTGGTACGGTGGAGGTGGGGAGGGGAGGGAAGTTCACCTGTTCAAAAAATATTTTCTGAGAGGTTATTATGGGTCAGGCAATCTATTCTGAGTAAAGCAGCTATTTTGCATAGAAATAAACCAATCTTCTTAAGAGGTTCAAGAACTGTTGTGCACTTTGGTTGGCGAGTCCTGAAAGCTTTTGTAACATCACATCTTTCTCGTGTTTGTAGACACTTTCTTTCTTTCCTTGAATCGGGGAGAGGGAAAGGAGACAGGCAGAGACAGACATACAGAAAGGGAATCACCTTCGTAACGTTTTCAGGTGAGGGCACAAGAACTCAGGAGGCGCACTGCTTTTCCAGCTCTTGTTATCTTCTTGTAGGTTCTGTACGTTGGACTGGGCACGTGGATCTAACACGCGAGTCAGCACCCTTGTAACTTTCTATCATTTACGTTTAAAGAAACAAGAGGTCTGAGTAGGAAGAAGGCAGGACCGGGCGAGTGCGGCTTGGCGTGGGACCTGAACTTGGGATTTCAGCCTGAAATCTCCGGCCAGGGCTTTCGCGGTCTCAAGACTCGGGACCCGGACACCCGCCCCTTGCACCGCCCACTGCACGCCTCCACTCGGGACCGGCTCCGGCTCAGCTCCCTGCCCACCCAGCCCTGCCTCCCGGGGTCCACCTGGAGCGCCAGAGCTAGGGCTCGATCCCCGGAATCAACCGCTCAGCCTGGGCTCTCCAGATCCCCTGGGCTGCATCTCGTCCTGGAACAGTAGCTGCTCCCACTAACCTTTGGAAGAGAGAAAAAACTGTTCCAGACCTTTCTGTGTACCTCAGGTGTGGGAGGAAAGGACATAAGCTTGTGTTAGAAGGTGTAGACATTAGGTTCCTCAAGGAGAAAGACTGATCCGAGAACTCTGAGCCCTTCAGCCCCCACTAAACCCCAGCCGCCGGCATTGGTCCTTGGGGAAGTGGCCGCCAGGAGGGTCGGTGCGTCGGACTGGTAACATGGCCGAGGCAGCGCTAGACGCCGAGCTCGCTATAGGCTCTCTCTCCCAGGATCGGATAGATGATTCATTTTTATATGTAATGTTTTACTCCACTCTATAGCTCCGACTGGTTAATGTTCAACCCCGGGGCTTGGAGGGGCAGCTTGGAGGGAGGCAGCCAGGGAAGACCCATTCAAGGAAGGAAGATAAAGGTTCCTGCCCAGGACTGCCTGCAGGGGGGACTGCTGCAAATTATTGGAGGAGCCAGAAAGACTTCGCAGCTCCTGGACGGAGGAAGCATTGATAGAGGGAGTCTCGGAGCTCAAAGGAAACTACCCCAAGCCTTAGTCCTGGTACAAGTGAGCGGGTCATTTTCTAAGTTGTTAGAGAACAAGCAAGCAAGCATATAAACAAAAAGCCCACTTTGGAGTGGATAAAGAAAACAGAAGAGGGGGAAAGATAGGGGGAGAAAAAGATAGAAAGCAAGGGGTGGGGCAAACACCTTAAACATTTTTGCAGGAACAACAGAATAGGAGAAATGGCTCAGGAAAGATCCATCAATGTCAGGGGATGGTGATACACACCCTGCTCAGGGAGGGCCCAGTGAGTCTGAACTTCTCTTAGCCCTTCTGAGAGGAGAAAAAAAATGCAGCTCCCCACACAGCCCCCTAAAAGTAAACACCTTTACCGTATACTCATTAATGTTTTTAAATTTTTTCTTTTAACAGGAGATGGTTCTTTCAATCAGTCGTTGACTGAGTAACTTTAGTTTCCACTATCTCCTGTTTTCTACAACTGCCATTGAATTGTTAACAGCGCACTGTTACAACAGGAGTAGCAATGATTTTTTTTAAAGGTAACTAAGTAGAATTAAATACATCTTTAACAGGCTATTTTATTTCTTCCAGGCCTTCTCTAATCTTCAAACAAAATCTAAAATCAACATTTATATAAAGTGCATAAAATGCTCAGCACGGAAGTGAATGGAGTTATGCATCCCATGCACAATAAATTCTGTTTTCTATCTTTTCAGATAGAAAGACAATGAGAAGTTCTCCTTTTAGGGGTGGGGTGGGGCCAGTGATAAATAAACTTAAGATCAAAGTAAAAACCTGAAAAAGTAAATTAGCAACGTGTCTAAAATCGGATTTCCTCATAACCCATTTTTAAAAAAATCTCATCTTCAATTATTATTTGTTTTCAATTTCAGTTAAAATGCAACTTTCAGATTAGGAAGGCTGGGAGAGAAAGGAGAGCTTTTAAAATTTCCTTCTGAAAATCTGCTATAAGAAATTTCTCCCGTTTACTTCCAGACCTCTCTTTCCTCCATCAGCCACGATTCTGGCTTCTCCTTGTGCTCAGATTAACTGCAGCTTGCAAAGGGGTTTTATAAGACAATCAATAGGGACTCTATATTCATAAATGCCTCTGATCTGATTACACATTCCCCCCCCCCCTCCTTTTTTCCCCATTCCTCTCAAAAATTTAAGCAGCGAGCCGGGGACTTCCAGCTTTGCAGCTTCTGAGAGCGGCCGGAGGCTGGGGAGCCCTGGCGACGGCGGCGAGGGCGCCCGTGGATTAGGGTGTGGATTGCAGGACAGACCTTTGTTTGGTCACATTCTCGACGGGGGTGCGGGGGAGGGTCGTTCTCCTTCGAGATCGCGCTAGATTTTTATAGACTCTTCTTAAAAGAACTCGCCGCTCTTCATAGGGTTAATTTATGGGGCTTTCGAGGAATATTGGGACTTTTAAGACTCTATTTTTTTTCCCATTAATTTTTTTTTTTTTGGTTCTACTCCTAAAGTGACTCCGGGGTTTCAGCACCTCGCAGGAAGAGGGTGGGGGTGGGAGAAAGAACAGGGCCAGGAGGAAAAGGGGAGGATGAGCTTCCTAACCAAACCGCCTACAGGGCCAGGCTGCACAACGTATTTTTAAAAATTAAATTTCTAATCGTGTTGTGGGCCGTAAAACTCAGATTTAGGAAGTGGGGGGAAACTGAAACAAATGTGGGCTCTATCTACCTTTTCCCAGATCTCCACCAATTTGAATTCAGTATTAGGGAGAAGACGAGTTTGGGCCTTAAAAATGTTAAGTTTAAAAAAGGACGACAGGCCAGAGAAAGGATTAGAGTAACAGGTGAGGGGGGCGGGAAGGAAAAGCCCCTGGACCGCGAACGGTCTGCGCGGGGTTCCTGCTCCAGCCCTTCCCAGCTTCAGGGGCCCAGAGGTGGGCGACCAGGACTGAAGGCTCGGGATGCCTGGGTTCCTGGGGGCCCCGACCTCCAGCTCGCCATCTTTGATCCCAAGAGGAGGAGGCTGGTGTTCACGCTATAGATTACGTTAAAAGTTCCTTTAAGCACTTTAATACACAACTAGCTCAGAAATCATTAAGAGACCTAGAGAAGGAGAAAAAATACCCTCACACTCACCGGTAATAAATGT TCONS_00202540 TCONS_00202541 TCONS_00202543 TCONS_00202544 r 3' 1707 TCONS_00202540 TCONS_00202541 TCONS_00202543 TCONS_00202544 r 3' 3949 EMBV3_20421 TTTCCCGAAGGCCAGCCCAGTGTTGCAGACCAAATGATGTCCACATCTAGCATTTCAGCT Gene GeneID:525275|LOC525275:XR_084583:37_cdna Constitutive 0 NULL GeneID:525275 14 PSEUDO LOC525275 NULL similar to Class B basic helix-loop-helix protein 5 (bHLHB5) (Protein BETA3) EMBV3_07019 GCCCATACCTTTATATATAACCTCACAACTAAGAAAAACAGGAAGGATAAATTCTAGGAG Gene GeneID:505694|FXN:NM_001080727:23_cdna Constitutive 0 NULL GeneID:505694 8 GENE FXN NULL frataxin EMBV3_13189 GATCCCACCACCCTATGACAAGAAAAAGCGAATGGTGGTTCCTGCTGCCCTCAAGGTTGT Gene GeneID:767925|RPL13A:NM_001076998:448_cdna Constitutive 1 NULL GeneID:767925 18 GENE RPL13A MGC128198 ribosomal protein L13a EMBV3_06649 GGCATTGGTGGTGTCCGTGTATTTCTTTGTCTTCATGGCATTCGGGTACTTGGTGTTCGG Gene GeneID:100336691|LOC100336691:XM_002688013:171_cdna Constitutive 0 NULL GeneID:100336691 5 GENE LOC100336691 NULL receptor for egg jelly-like protein-like EMBV3_26238 CGGGAAGTTCCTGATTTCCCTTGGTATAATTTAAAATAGGATATTTCTCTGCTACTGAAC Gene GeneID:537203|DOCK1:XM_002698580:156_cdna Constitutive 0 NULL GeneID:537203 26 GENE DOCK1 DOCK180 dedicator of cytokinesis 1 EMBV3_38945 CTCTTGCCTAACCACTTTGAATCTTCATTTGTCCCTCCATGTACTGCCCATCTGGCAGCC Gene BVV0102_100194 + 0 NULL GK000017.2:67248094-67284514 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081608 1 XLOC_050487 NonCoding TCONS_00081608 XLOC_050487 NonCoding NonCoding - 17:67268449-67268725 - TSS61548 276 0.271739130434783 1 0 0 0 0.000100586876369168 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00120306429465558 9.09090334668236e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.32666974109569 0.0628838047291756 -0.00954430870286931 0.83348348184314 GGAGGAGGACACGGAACACGCGGCCGGTCGTGCAGGGCCTGTGGGAAGCTTCGGCTTTTACTCTGAGTGAGATGGAAGCTGGGTTGGGTGGGGGGGCAGGGAGGGGTTGATCACGAGAGGAGTGTGAATTCACCTACGCGTGGCTGCCAGATGGGCAGTACATGGAGGGACAAATGAAGATTCAAAGTGGTTAGGCAAGAGAGGAAACTCCTGTCTTATATTTTCTGAGCTTTCCATTCTTGGGCCGGAAATCACAGCCCCACACTCCCCCGCCGG TCONS_00076053 . 5' 15790 TCONS_00076053 . 5' 15790 EMBV3_42147 GCCTGGCATGGTTTATATTTGACTACATTCAACTCAGGGGTGTCCAGGGCGGAACACTGT Gene GeneID:514357|UGCG:NM_001076850:29_cdna Constitutive 0 NULL GeneID:514357 8 GENE UGCG MGC142606 UDP-glucose ceramide glucosyltransferase EMBV3_34773 GCATTTGCGGGGAACTTAATCCCCGAAGACGAGATACGAAAGCAGGTGCAATCTCAGATC Gene GeneID:617881|F13A1:NM_001167894:14_cdna Constitutive 2 NULL GeneID:617881 23 GENE F13A1 NULL coagulation factor XIII, A1 polypeptide EMBV3_00200 ATCCTGGATGACAGTGGCTACGTGAGTGCCTACAAGAATGCAGGTACCTATGATGCCAAG Gene GeneID:614988|TPPP3:NM_001034774:438_cdna Constitutive 0 NULL GeneID:614988 18 GENE TPPP3 MGC127860 tubulin polymerization-promoting protein family member 3 EMBV3_11912 GTTTCTTTTATCACTTGGTGGAGAGTGGGTAATGGATGCTGGGGAAGGAGCCTACTGCAG Gene BVT0102_093087 - 1 EMBV3_19084 GK000007.2:51880522-51888628 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33837 CTTCTCAGGTCTGGAGACAGATCACTGCTTGGACTCTGCGTTCAGTAGGGAAGGTAACTA Gene GeneID:512693|POLDIP3:NM_001103183:165_cdna UTR3_Alt 3 NULL GeneID:512693 5 GENE POLDIP3 NULL polymerase (DNA-directed), delta interacting protein 3 EMBV3_08534 TTCCAGCCTCGCCTGCTGCCTGCTCGGCCTCCTGGCGTTGACCTCCGCCTGCTACATTCA Gene GeneID:280888|OXT:NM_176855:703_cdna Constitutive 0 NULL GeneID:280888 13 GENE OXT NULL oxytocin, prepropeptide EMBV3_13270 GCCCACGGCCTGAAGGGGCACATCATCTCGAGCCCCTGAGGGCAAGACTGTGGAAGTGCC Variant GeneID:533000|GMPR:NM_001075977:119_cdna 724^926 1 EMBV3_22778 GeneID:533000 23 GENE GMPR MGC143402 guanosine monophosphate reductase EMBV3_12938 CTCAAAAGGCATCTGGTTCTCTGGAATGCAGCCTTGAATGTAGGTAAAAGAATTGTGAGG Gene GeneID:786080|CCDC14:NM_001101298:113_cdna Constitutive 1 NULL GeneID:786080 1 GENE CCDC14 NULL coiled-coil domain containing 14 EMBV3_34491 AGTAGAGAATCCAAGCTCGTCCTCCCATGGTTTAGGTGGTGCCACTCTTGGCATGGAGTT Gene BVT0102_059326 - 0 NULL GK000011.2:96772638-97118398 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09609 GTGGTTGGCTGTCAGGTTGCCTGGTCTTGTGAGCCTGTTTAGAATGAACGTTTCTTTGTC Gene GeneID:282020|PTGFR:NM_181025:11_cdna Constitutive 0 NULL GeneID:282020 3 GENE PTGFR NULL prostaglandin F receptor (FP) EMBV3_03838 GTAGTACGGACATTTCAGGCCACCAGTGAAAATGGAGTAAGAACATGAAGCTCTGGTGAC Gene BVV0102_330577 + 1 EMBV3_16514 GK000002.2:66295954-66585179 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25744 CTTCTGTGACCTTGATGCTCTGATGAAGCTCTCCTGCTCGGACACATCCCTTAATGAGCT Gene GeneID:539172|LOC539172:XM_002691559:11_cdna Constitutive 0 NULL GeneID:539172 11 GENE LOC539172 NULL similar to Olfactory receptor 1J4 (Olfactory receptor OR9-21) (HTPCRX01) EMBV3_29091 TGTGTTTGGAATTGCTCTCTACAAGAAAACTGCCCACTACTACTAACTTGAGCAACAGTG Gene GeneID:509292|UBA5:NM_001101067:22_cdna Constitutive 2 NULL GeneID:509292 1 GENE UBA5 NULL ubiquitin-like modifier activating enzyme 5 EMBV3_06622 GAAAAACCTGATGAGGAGGTGAAAGAGACGACTCAAGACCCAGATGTGAGAGACCCGCCT Gene GeneID:508668|RIPK4:NM_001100327:9_cdna UTR3_Alt 2 NULL GeneID:508668 1 GENE RIPK4 NULL receptor-interacting serine-threonine kinase 4 EMBV3_28622 CGGCACTACCACGGGCTGCGGGCTGCCCAGGTCAGGGCCCCAGCAAGAAAGCAGCCAAGC Variant GeneID:514674|TARBP2:NM_001075678:36_cdna 166^335 1 EMBV3_17502 GeneID:514674 5 GENE TARBP2 MGC139801 TAR (HIV-1) RNA binding protein 2 EMBV3_34804 ATCTCTGACCTGAACGAGATATTTAGGGACCTGGGAGCCATGATCGTAGAACAGGGTACC Gene GeneID:519624|STX16:XM_002692416:382_cdna UTR3_Alt 2 NULL GeneID:519624 13 GENE STX16 NULL syntaxin 16 EMBV3_43367 ACGCGTTGTTACCATCTTCTTGGGAAGCGCCGGCTATCAAGTGGGGATTCAGTTCTTTCT Gene BVT0102_068100 + 0 NULL GK000003.2:88759032-89407946 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170554 TCONS_00170558 1 XLOC_103608 Coding TCONS_00170558 XLOC_103608 NonCoding Coding - 3:89253388-89256769 - TSS127415 499 2 0.852958579881657 5.22430791153658e-201 5.47407720269479e-24 0.000452659540273563 0.00020479089675073 0.000976030928520103 2.72925817143018e-225 0.000426380732209164 0 1.62164287055221e-14 0 0 0 0 0 1.33276773469209e-109 0 0 0 1.04870811758434e-145 6.76793936842494e-30 3.9291776338562e-37 0 0 0 8.26274726053442e-292 0.0010578239410734 7.356100283496e-05 1.62878899012142e-15 1.94573476090238e-05 0 0 noncoding 1 0 0 0 -1.36586938110801 0.229974544922246 -0.0139761709730477 0.779457273391051 TCCTGCGAAGGGGAGTTGGGGCCACACGCCCGCCCCGGACCTGCCCTGTACTTTTGAGCAGGGGCGCTCTTTTCAGTTTGGGTCTGCGCGGGTTTAGAGGCCTGGGATGTTAAAAGAGTCGACTAAATGAGGGAGGCCAGGCGGAGGCGGCCGGTGGCGATGAGGCCCTCTTAAAGGTTTAGGAAGTTCAAAATGCGGTGATTTGAAAGACAGACATTGTAACTATTTGGCGACGCTGGGAGGATCTGATCTGCAGGGATTGGAGAAGAGGCCGAGTTGGGGAGTACAAACGCGTTGTTACCATCTTCTTGGGAAGCGCCGGCTATCAAGTGGGGATTCAGTTCTTTCTACACATCAAGCTGACAATTAAATATCTTCCTAAAGCAGATTTAGAAGATGATTTTTAGTGATTTTTGTTTTGTTTTCTCTTTCGGGCGGTGGTTTACTTAAAGCCTAAACAGGCGTATCTGGAACATTTAATCATGTTCATTGTATTCAA TCONS_00170559 s 5' 0 TCONS_00170559 s 5' 0 EMBV3_00632 ATCTACTATGGTGGCCTTGGCTATGGTCTTGGTGGCTTTGGTGGCCTGGACTATGGCTAT Gene GeneID:783140|LOC783140:XM_002684599:44_cdna Constitutive 0 NULL GeneID:783140 1 GENE LOC783140 NULL hypothetical LOC783140 EMBV3_41534 TGTGTAAGCTCTCTCAGGAAAACCATAACAGAACTTTTTCAGTTTGATTCAGTGACTGAC Gene BVV0102_109247 + 0 NULL GK000026.2:9599153-9932076 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152938 1 XLOC_092703 NonCoding TCONS_00152938 XLOC_092703 NonCoding NonCoding - 26:9811057-9811355 - TSS114108 298 1 TCONS_00152938_1 52 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00321229884295794 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 ATTGCCTCAGCAGTTGAAAGCTGGAGGCAACACGACCTTCTCTCTCTGCCCAGAGAATTTTTTTATGCTAAGTGTCATCAGATCCCTTTCTGCCACTATTGCCTATAAACTAATACTTTGCTTCTGTCAGGGAAAGGAAGAGAGGCCATTTTTCTTTTCTCATAGAAAATTTTATCCAATTGTTTTTAAACGAAGAGAAATGCAAAGGATATTTTATTTCTAAATTTGTCAGTCACTGAATCAAACTGAAAAAGTTCTGTTATGGTTTTCCTGAGAGAGCTTACACAAAACAATAATT TCONS_00151404 TCONS_00151405 TCONS_00151406 . 3' 120722 TCONS_00151404 TCONS_00151405 TCONS_00151406 . 3' 121019 EMBV3_00209 CTCTGGAGACCCTGTCGATCACCAACTGCCTGATTTCGGAGTCAGACCTGACGTACCTGT Gene GeneID:100298541|LOC100298541:XR_083910:271_cdna Constitutive 0 NULL GeneID:100298541 17 PSEUDO LOC100298541 NULL similar to preferentially expressed antigen in melanoma EMBV3_31720 AAAGAATCCACCCACGCCGTATTTCTCGTGCTCCGTAGGTATCCACATGGCTAAACAGGG Gene BVT0102_034765 - 1 EMBV3_07089 GK000004.2:56128666-56366862 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21301 CTTCCCAGAGGGACCTAAGCGAGCTGTGCAGGAGATGAGAGGAGATGTACACTCACTGTA Gene GeneID:784484|DENND5A:XM_002693106:499_cdna Constitutive 2 NULL GeneID:784484 15 GENE DENND5A RAB6IP1 DENN/MADD domain containing 5A EMBV3_38611 GCATCAAGACCTAACTCCCAGTTTAAAGAAAATTCAGGGAACAGAAGAACAAATTACATG Gene GeneID:100124429|ZFP30:NM_001102539:471_cdna Constitutive 2 NULL GeneID:100124429 18 GENE ZFP30 MGC159771 zinc finger protein 30 homolog (mouse) EMBV3_27658 TCGGGCAGAGATTGAGTGCCAGAATCAGGAATACAGCCTTCTACTCAGCACCAAGATGCG Gene GeneID:788727|LOC788727:XM_002696022:466_cdna Constitutive 0 NULL GeneID:788727 19 GENE LOC788727 NULL similar to keratin EMBV3_39664 AGTTATCTTCATGCCACCGTCTTGATAGCCTTTGTCTTTCAGCTACCCTACTGTGGCCCC Gene GeneID:782329|LOC782329:XM_002699127:199_cdna Constitutive 0 NULL GeneID:782329 29 GENE LOC782329 NULL similar to odorant receptor M30 EMBV3_23837 CCATGACCTGCACTTTGGAGAGTTCCTCAACACCACCTGCAAGCACCTGATGCGCCACTT Gene GeneID:515055|HEATR7A:NM_001102018:92_cdna Constitutive 0 NULL GeneID:515055 14 GENE HEATR7A MGC152033 HEAT repeat containing 7A EMBV3_13495 TTTATTATTCCTAGGGAGACCCTTGTCCTGTATGCCCTTGGAGTGGTGCTTCAGGATCCC Gene GeneID:532945|CYP20A1:NM_001015644:128_cdna Constitutive 0 NULL GeneID:532945 2 GENE CYP20A1 MGC134038 cytochrome P450, family 20, subfamily A, polypeptide 1 EMBV3_05511 CTGCGATTTTCTGACTGAATGGTTATACAACCCACGGCCGGCAATCCCACTCTCCCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10710 GTTCACTCTCAGCAGAGGATCCAATCAGTCAAGCCCCAACTCTACAAGGGGCTCTTATCC Gene BVT0102_238780 + 1 EMBV3_29775 GK000028.2:35360794-35366023 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43186 TGGCTGCTCTGATTTGCTCCCCGGTCACCCAGAAGTGGCATTTTCACCTTGTCTGTGTTT Gene GeneID:535315|FAM73B:NM_001076053:166_cdna Constitutive 0 NULL GeneID:535315 11 GENE FAM73B NULL hypothetical protein LOC535315 EMBV3_19802 CAGAGGGTTCCCCAGGACCAGAAGGAGCTTTATAAGAAGCAGGCAGAGGAACTACAGACA Gene GeneID:100139585|LOC100139585:XM_002699010:35_cdna Constitutive 0 NULL GeneID:100139585 29 GENE LOC100139585 NULL similar to Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) EMBV3_06918 ATGTCTCACACCATCCTACTAGCACAAGCCTACCAAGAGCCCAGAAGGCAGAACTTACGC Gene GeneID:100296637|LOC100296637:XM_002695860:332_cdna Constitutive 0 NULL GeneID:100296637 19 GENE LOC100296637 NULL similar to enhancer of rudimentary homolog EMBV3_29334 TGGCTGGTTGGTTTTAGTACTGTAAACTGCTTCTGAGCAAACACGGAAATTTAGCAAAAT Gene GeneID:508405|ANKRD17:XM_002688348:134_cdna Constitutive 2 NULL GeneID:508405 6 GENE ANKRD17 NULL ankyrin repeat domain 17 EMBV3_34298 CCTTCAGGAGACCACAAGAAAGGGGACTTGGCAGAGACTGAGTGATTATGTAGCTGTTAG Gene GeneID:616612|LYPD6B:XM_002685362:253_cdna Constitutive 0 NULL GeneID:616612 2 GENE LYPD6B NULL LY6/PLAUR domain containing 6B EMBV3_02297 AGCCGCCAGGTGATAAAGGAGAACAAAAGGATGCCTCAAGAAACGAACTATCTGAGCCCC Gene GeneID:100295268|LOC100295268:XM_002692154:172_cdna Constitutive 0 NULL GeneID:100295268 13 GENE LOC100295268 NULL hypothetical protein LOC100295268 EMBV3_15494 ATTGAAACACAGTCCTGCATATTTGTTTACAGTTGCCCTTGGCTGCTCTGGACACTGCAG Gene BVV0102_100705 + 0 NULL GK000013.2:72243310-72804659 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043811 TCONS_00043809 TCONS_00043810 1 XLOC_026036 NonCoding TCONS_00043809 XLOC_026036 NonCoding NonCoding - 13:72558089-72565269 - TSS32326 686 1 TCONS_00043809_1 42 0.763848396501458 2 0.904722106142917 0.00595740898655267 0.00682944367705856 0.00133046963205648 0.00442802946764349 0.00541074156446157 0.00287833036723631 4.31376691071785e-26 4.21741614352024e-09 0.00463444952191903 0.000620764144485414 3.33653639837667e-05 0.0015454589912055 0.00073968173588604 0.0110596344050169 0.00121397882770756 0 0 0 0.00160637936330616 0.00427155747133045 0.000195649935207988 0 0 0 4.9972285995849e-06 0.0033978570448387 1.62157502913253e-06 0.000350022545197496 6.36795439581624e-05 0 XR_231576.1 LOC101907840 PREDICTED: Bos taurus uncharacterized LOC101907840 (LOC101907840), 7e-39 165 72.58 0.428571428571429 XM_005270922.1 HOOK1 PREDICTED: Homo sapiens hook homolog 1 (Drosophila) (HOOK1), 3e-11 73.4 73.91 0.196793002915452 0 noncoding CCGGCAGCTTCCCAAGCCCGGACGGTTTTTACCGCACGCTGCCCAAGAACGCTGCGAGACCCGTGGAGGAATATTTTTGATACTGATTCTCGCGGAGGGAACAGACTGAAACCCCCACCAGGAGGAAGAAGTTAACTCTGTGCCGCCCACAAGCACGTAGCCCCAGTCGGGTCGGAACCAGAAGGTTGATGACATTGACTCCTGATGACATTGACAACTGATCAGAAGGATGTCCACGAGCTGATCACACACCCCAGAATCCCCCTCCCTTATCCTGTCTTTAAAAACCTTCTCCTGAGAGCCTTCAGGGAGTTTGGGCCTTTAAAACACTAGCTGCCCTTTAAAACACTAACTCCTTACTTGGTTCCCTGCAGTAAACACTGCACTTTCCTTCACCAGAACCCAGTGTAAGTAGATTGGCTTGCCTGCATGTGGGAAAGCAGACCCAAATTTGGTTCAGTAACAGCAGCACTAGTGTTTATTAATATTTCTGCCATAAAAACATTATTCACATAAGCCAGAATCTAGCCCACCTCCTGTTTTTATAAATAAAGTTTTATTGAAACACAGTCCTGCATATTTGTTTACAATTGCCCTTGGCTGCTCTGGACACTGCAGAGGCAGAATTGAGTAACTGTGACAGAGATTATTTGGCCCCTTTCACTGAAAATATTTACTGTCCTTGC TCONS_00046175 TCONS_00046176 r 3' 42667 TCONS_00046175 TCONS_00046176 r 3' 49846 EMBV3_33381 GAGGGAGCATTCTCCCACGTCCAGTGCACTGATCATTTTAGTATGTTTGTGCTTTGTACG Gene GeneID:535408|ELAVL4:NM_001081606:91_cdna UTR3_Alt 3 NULL GeneID:535408 3 GENE ELAVL4 MGC140771 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) EMBV3_40257 AATGAAGGAAGGCAGTGAAAATGGGTTCCATCTCTGGGGATACTGGACCTGGGTCACACT Gene BVT0102_074946 - 1 EMBV3_17474 GK000016.2:43449542-43463115 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38535 CCAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACCAAGGCCCAGAAGA Gene GeneID:618012|LOC618012:XM_002695902:237_cdna Constitutive 0 NULL GeneID:618012 19 GENE LOC618012 NULL similar to histone cluster 1, H2bd EMBV3_34307 CTGATCTGCCCCAAGGAGGAGGCGTCACTGCTGTTTTCTCTGAGCGCATCACCTCCGTCT Gene GeneID:100126182|COX19:NM_001109966:2_cdna Constitutive 0 NULL GeneID:100126182 25 GENE COX19 MGC139246 COX19 cytochrome c oxidase assembly homolog (S. cerevisiae) EMBV3_12374 AAAGATATCAGGCCTACTGCTGAGGTCACTGCCACTTCTCATGTGCTGCTGAAGGGAGCA Gene GeneID:506085|ZDHHC16:NM_001024482:87_cdna Constitutive 2 NULL GeneID:506085 26 GENE ZDHHC16 MGC137909 zinc finger, DHHC-type containing 16 EMBV3_39688 CGTCACAACCAGTGAACATCACTGTCCAAGCCGGTCTCACTGATGCTGAAAATGATGCTG Variant GeneID:282229|FCGR2:NM_174539:197_cdna 723^842 1 EMBV3_34935 GeneID:282229 3 GENE FCGR2 CD32 FCGR2B MGC137852 Fc fragment of IgG, low affinity IIb, receptor (CD32) EMBV3_09039 CCAGCCAATCAGGAATCATCTGATAGACCCCTGCCATCCCTCTATTGGAAAGTAACTTTG Gene BVV0102_137700 + 1 EMBV3_25273 GK000007.2:17814126-17832595 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21681 AGACAGGACTGAGGACTGGGGGACCCTGCAATTTTTGCTGAGTTTGAGGACCCTAATGTG Gene BVV0102_449708 + 0 NULL GK000028.2:41568267-41644489 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159711 TCONS_00159712 1 XLOC_097484 NonCoding TCONS_00159712 XLOC_097484 NonCoding NonCoding - 28:41636644-41639894 - TSS119619 926 2 TCONS_00159712_2 61 0.41036717062635 2 0.715604801477378 0 0.000184474239180231 6.4493651371338e-07 0 5.33153162308664e-06 3.86277999261248e-06 0 0.000172458462824576 8.52042207574294e-06 0 0 0 0 0 0 0 0 0 7.74376787146104e-06 0.0012736442366191 3.27824326396803e-06 0 0 0 7.22941807257639e-11 8.87028936505529e-11 8.73185424445163e-06 0 0 0 XM_617702.5 DGKH PREDICTED: Bos taurus diacylglycerol kinase, eta (DGKH), transcript 4e-88 329 94.39 0.228941684665227 0 noncoding GCAGTCCATGGAGTCGCTAGGAGTCGGACATGACTGAGTGACTTCACTTTATTTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGCAAGACCTACATGAAGCAGGCACTGGTCAGGCAGGGAATGTACAGAGAGCAAGAGCTCCACCATGTTGAGTGGCTTGACCATACAGAGAGTTTGCAAAGCAGCAGCAATGAACAAAGGAGATGGAGCAGAGAGCAGGTGGGAGGGCAGGAGTGTGTCCAGATGTGTAAGTCCAGATGTGTACGTGGATGGCACTGACATAAAGATGGGGGTTGGTGCCTATCACTTTGTGTTCAGCAGCGTTTTTTAAAAATCCCAATGCCTAGGCCACACCCTCGGCCAACTAAAGCCGTCTCTGGGGTTGGGCTCCAGGTGTCGTAATTTATTAAACTCCCAAGTGACTCCAGCGTGCACTGGGGGCTGGGTGTGAAGGCAGAAGACAGAGAACTGGGTGGGAAGAGAGAGAAGAGAGGCCCTAGAAGTCTCACAGAGGCACATCTGCGTGCTCAGCCCAGAGCCCGAACCGGACCAAGCAGGGAAGGGAAGACAGGACAGAGGACTGGGGGACCCTGCAATTTTTGCTGAGTTTGAGGACCCTAATGTGGAAGGCGCCAGCCAACACCAGCCCCTAACTCTGGCTGCCTGAAATTGCTAGCATCTCCTGGGATTAGCTGGTTTTGCGAAAGGAGAGAATGAGCACCTTCCCCACCAACGCACTCACTGCTCTGCAAAGAACTAACCCCCGTGGCTCCTAAAGAAGCCTCCAGCTAAAGCGGGGGAAGG TCONS_00159713 s 5' 106 TCONS_00159713 s 5' 3355 EMBV3_00452 TGGGACCAGCTACAAGTATGGCAGCATCATCACAACAATTTACCAAGCCAGTGGAGGCAG Gene GeneID:286762|CPA1:NM_174750:143_cdna Constitutive 0 NULL GeneID:286762 4 GENE CPA1 NULL carboxypeptidase A1 (pancreatic) EMBV3_30672 TCAGCAGCATAGAGACCCGGACCTCCCGTGGAGGAGCAGGGCCTTTTACCCTTGCAAAGT Gene BVV0102_091932 + 0 NULL GK000019.2:57269370-57270434 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097998 TCONS_00094779 TCONS_00094781 TCONS_00097999 TCONS_00098000 TCONS_00094777 TCONS_00097997 TCONS_00094778 2 XLOC_058400 XLOC_057543 Coding TCONS_00097997 XLOC_058400 Coding Coding SLC9A3R1 19:57269556-57278641 j TSS72494 2238 2 TCONS_00097997_3 204 6 0.754293262879789 0.00067936315030417 0.000333750950309791 0.000721756519627077 3.11164252412267e-05 0.000146840713631484 0.000169892190077424 1.01201473360494e-05 1.56186093148169e-05 0.000188571593592972 0.000397095766814545 1.07379112676044e-05 4.79625461232504e-05 6.43669550035754e-06 2.88772497457647e-10 1.37074563712766e-09 0.00126044167824447 2.86437497054e-24 0.000180396398247999 0.000756991287374449 0.000865950926313712 0.000502775304078753 0.00338137804368586 0.00039170338241245 0.00303837575042067 0.000244197802123915 2.08014216719219e-09 8.64213116004148e-10 0.000564637627772651 0.000286869607740677 0.00253193281713191 NM_001077852.2 sodium/hydrogen exchanger Bos taurus solute carrier family 9 (sodium/hydrogen exchanger), 0.0 2352 100.00 0.582216264521895 NM_004252.4 SLC9A3R1 Homo sapiens solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 (SLC9A3R1), mRNA. 0.0 1141 79.72 0.581769436997319 TCONS_00097997_3 sp|Q3SZK8|NHRF1_BOVIN NHRF1_BOVIN Na(+)/H(+) exchange regulatory cofactor NHE-RF1; 3e-133 383 100.00 0.995098039215686 2 coding 0 0 0 0 -0.432859861778508 0.0637222078591755 -0.0198059572848391 0.710145712146944 CAGGGTGACAGAGGAGTGCTGCCCACAGAAAGCCGAGCCTCCCCGTGGTGGCAACTGCGCGAGCTTCGGCCTCGGCTCTGCGCCATGAAGAAGGGCCCCAATGGTTACGGCTTCAACCTGCACAGCGACAAGTCCAAGCCAGGCCAGTTCATCCGGGCCGTGGACCCAGACTCTCCTGCCGAGGCCTCGGGGCTCCGGGCCCAAGACCGCATCGTGGAGGTGAACGGGGTCTGCGTGGAGGGCAAGCCGCACGGGGAGGTGGTGTCCGCCATCAAGGCTGGCGGGGACGAGGCCAAGCTGCTGGTGGTGGACAGGGAGACGGACGAGTTCTTCAAGAAATGCAAAGTGATCCCTTCGCAGGAGCACCTGCAAGGTCCCTTGCCTGAGCCCATTACCAATGGGGAGATCGAGAAGGAGAACAGTCCTGAAGCCCTGGCCGAGACGGCCTCCGAGAGCCCCATGCCACCCCTGGCAAGAACCGCCTCCAGTGACACCAGTGAGGAGCTGAATTCCCAAGACAGCCCCAAGAAACAGGACTCCACGGCACCCTCGTCTACCTCCTCCTCCTCCTCCGACCCCGTGCTGGACTTCAGCATCTCCCTGGCCGTGGCCAAAGAGAGGGCTCACCAGAAGCGCGTCAGCAAACGGGCCCCGCAGATGGACTGGAGCAAGAAGAACGAACTCTTCAGCAACCTCTGAGCCGCACCCCGCACCAGCAAAGCCCAGCCCCACACCCAGCCAACTCCCTCTCCCCCTTACCCCAGATCAACACACAAATCAGCACCAGCATCTCCTCTCTCGGCAAATCTCATCTTTCTAGAGAACTATGTTCTTCCCTTACCTCCGACAAGGTGACTGTTTTTCTGTCCTGCCCCAGTCAAAAAGTAGACTCTGTGCCCTTCCTTGTTGGGTGCTTCAGCCCACCCGCAGTCCCCCTGCCACCCTCCTGGGACATCACTGGGACCTCCATCAAGCCAAGATCCTGAGACTGGGCAAGAGGTCACCTTCCCTCCTGACCCCAAGTGATGACCAGGTCTGGGATCCACCAAGGAAGAGCAACATCCCGGAGTGGGCTGGGGCCACCATCCTCAGAGCTGTGACTTGGGCATCTTATTTTTAATTTTTTAAGTGCAGTGCTACAGAGTTTAGGACTTTTGGTTCTTGATTAACATGATTTCCCAGGTTGTTGCATCCGGGACGTAGCAGTGGCCTTACCCTTCCTTCAACTTTTTTTTTTCTGCTCCCACACCCCAGAGACCTGGGCAACATGGGGAGGGTTTGGCCACCCCCTGCCCAACCCTGAGCCAGACACAATTGTAAGGAAATTCTTACCCGAAATTCAACTAGTTTCTCCAAACCACCTTGGCCTCTGTGTGTTCCTTTGCAGCTCTTTCCATGTGTCCCCAGAGTGGCCTCTGGCTGAGAGGATTGTCCAGGGCTCCCTGGGACCTCAAGCCCGGAGCCAGAAGTGGGGTGGCTTTAACCAGAGGGCCTCGAGCCTGTAGCCACTGGGTGGCTACGCCATGCGTGGGTCCTGTGGGAGGACCCGCCGGGGCTCCCGTGTGCTTGGCTCACCGAGGCTGCCCTACACGGATGGGCATCAAAGAAACGAGGAAACAGGGAGCTTAGAGCCCATGTGCGCAGAGGGAGGGCTCTAAGAGCCACCTCGGATCCCAGGAGTGTTCAAAGGGCGAATCCACCATGGAGCCAGATGGTTCGGCTGTAATCTTTCTGCCCGCAGCCAGAGAGGCACAGATTCCAAGGCATGACCCAAGCTGGTGTCCCTGCCCCCCCAGATACTCTTATCTTACCTGACCATGGACCTGACTGTGGGGATGGGGAGGACAGACCTGGCCCGCTGGGCCCTGGAACATGCTTGTGGCAGGTGGGGTGGAGGGGACTTTGCAAGGGTAAAAGGCCCTGCTCCTCCACGGGAGGTCCGGGTCTCTATGCTGCTGACCCGAGGGCATCCTGGACAGCTGTCAGCATGGCCTGCAGGGCCCAGTTCATGGGCAGGCCGGAGGAAGGGAAGCGGGCCCTGGGCTGTCCTCCACCCCACCCGGAGGCCACTCAAGCCAGGCTCCTGGGACTGAGGAGAACAAGCAGGGAAGGTCACTATCTGATCATCACTAGAGCTGTTAAGGTTAGAATTCCACCACTGGTAAAAAACCTTCCCAAACCCTTACCACAGCACCACCTGCAGCAGTCAGCCTGGGCCTGGCCTGACCCCACTCACCC EMBV3_25367 GCTATCATCAGGAAAGAAACACTAGCCCCATCTTATTCTCCTGTTCTGGGCCTGAGAGGG Gene BVT0101_038505 + 0 NULL GK000013.2:51727823-51736105 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042909 TCONS_00042911 TCONS_00042906 TCONS_00042908 TCONS_00042903 TCONS_00042913 TCONS_00042905 TCONS_00042904 TCONS_00042914 TCONS_00042910 TCONS_00042916 1 XLOC_025800 Coding TCONS_00042903 XLOC_025800 Coding Coding RNF24 13:51620612-51735331 j TSS31848 8818 5 TCONS_00042903_21 167 0.0614651848491721 6 0.923185550654649 8.01062560034662e-07 0.000550252119824233 0.00040535615739894 0.000411396906359379 0.000349202995275379 2.98238713760871e-09 2.80077305598204e-05 0.000419788929990855 0.000262125613661447 9.92233433643377e-12 0 9.95712804910385e-10 8.20476116520275e-11 6.86483094537608e-05 6.87094039288247e-19 6.7113546993428e-08 1.36662797713454e-11 0.000548735488458623 5.31502618675921e-12 0.000165210809869572 3.77033813619159e-07 6.38651596014284e-09 0.00012609996052888 5.49509096416295e-12 0.000350269379313536 0.000568634309929372 0.000214768134957978 1.94692000896956e-11 3.35923531379593e-05 5.03375626440794e-05 XM_005214885.1 RNF24 PREDICTED: Bos taurus ring finger protein 24 (RNF24), transcript 0.0 1.149e+04 99.66 0.727716035382173 NM_001134337.1 RNF24 Homo sapiens ring finger protein 24 (RNF24), transcript variant 2, 0.0 1873 74.96 0.307779541846224 TCONS_00042903_1 sp|Q9Y225|RNF24_HUMAN RNF24_HUMAN RING finger protein 24; 5e-105 301 99.32 0.993243243243243 6 noncoding 0 0 0 0 -0.0891129944169923 0.640037981226592 0.0226772695408911 0.747767437019935 CCCCGCTGGGCCCGCCCCTCGCCGGGGCTGTGGCGCGCCGTCTGCCGCTGCCACCTCAGCCGCGCTTGGTTCAGCCAGACGCCCGCTGGTTACTGCCCGGAGCTGACGGTCCCAGCACGCTCGCCGCCTCTGCCAGCACGACAGATTCATCCATGAGCTCGGATTTCCCACATTACAACTTCAGGATGCCTAATATTGGATTCCAGAACCTGCCACTCAACATATATATTGTGGTTTTTGGCACTGCTATATTTGTCTTCATCCTTAGTTTACTCTTCTGTTGCTACTTGATTAGGCTAAGACATCAAGCACACAAAGAATTTTATGCCTACAAACAGGTTATATTAAAAGAAAAAGTAAAAGAACTGAATTTGCATGAGCTCTGTGCAGTGTGTCTAGAAGACTTCAAGCCTCGAGATGAGTTGGGGATTTGTCCATGTAAGCATGCCTTCCACAGAAAGTGCCTTATCAAATGGCTGGAAGTTCGCAAAGTATGTCCACTGTGCAACATGCCAGTTCTGCAGCTGGCCCAGTTGCACAGTAAGCAGGACCGTGGACCCCTACAGGGACCCCTCCCCGGGGCAGAGAACATTGTATAGCTCACCACAAGGATCAAACTGTTGCAGGATCTGGGAGGAGCAGAGCTGGGAGGAACACAAGTGGTCTCTGTGTTGGCTGCTCTACCTAGGGCACCAGCTGCTGCTCCCTTTGTCTCATGAAGAACTCTCGGGCCAGCTAGGCTGGGAACCCAGACTTCTGGGTCTTGTGACAACCAAAGTACTCTGACACTACCCCGTGCCAAGAGGAATGGATGAGCCTGCAATTTGGTTCAAGAAACCTCAAGAGGATCTCTTGCTAACTCCATTACATTCTGTCTCCCAGACACTCATCTCCACGCCAGGATGAATCTTTATCAACCAGAAGGGAAGATAAACCCAAGTGTTTCAGAAAGGAACTGAAGGCAGGTCTTTAAAGCCCCTACCCTCCCCCCCACACACACACCCTGGGGACACACGAGCTTCTCTGCAGGCCCTGCACACCTTTGCAGCAGCAAACCCTCCCAACAGCCTCTAAGCCAAGTGAAAACAGCGGTTACCTCAGCCCAGGCGCAGCCGGCTGCAGTGCCAGAGGCAGTGTCAACAAGGCCACTCACATTACGTTCCTTTGGTAAGGCCATCTTGGAAACCAGGGGCTTGGTTACAACAAAGCAGCAGTGGCTGCCACCACTGATTCTTCCTCAAGTCCACATTTGCTTATCCAATCATCTGAGCTAAAAACAGTACACATGCTTGGAAAGGTCTGGTCAAAAGCCATTTCCTCTTATTTCCCCTCCTACTCACCAGTGAGGCACAGCCAAGCCACCATCAGGAGCCCCAGCAGGGGGTGGGTCTCTGAGCCCATGCTGTCCCTGTATGACCCGAGCACCCCAGGGTGCTGCCCACATCCCCACATATACAACGTGGCTCCAGTGTAGCTGCTAGTCTTGGCCCACTGCCCCAGTAGGAAGCTGCTGTGAGCCCTTCCCATGGCTCTGGAAAGGAGCATCTCTCTGATAATGGCCAGTCCTCCTGGCCTTGCTGAGCTGGGGAGGCTGCTAACCCCTTGCCTCTCCTTGTCCTGCCGTCTGTTCTCTTCCCTCCCTTCCCTTCCCTGTCTGTCTCTCCTCAAGAGAAAATGCCTGTCGTTGACATTTTAACTATTTAAAGCATTGCAAATAAGATCCCAATGTAATTCTGAAGCCAGGGATGCACTTGCAATTGTAGTTTCAGGAAGCTCCTGCAGGGCTATTCATCGTTGGCGTGTGCCTCAGTATTCAGACGACGATAACTGAGTGTCGTTACAGGAGAAAAACGCATGCTGCTCTTTGGTTCTTTGTCCTACTTTTCATGTTCTTTGTCCTACTTTTCTAGAAATGACTGAGTCCAGCAGGATTCATGACTACTTTATAGGTTCACTATGTGAAGCAGCATTGGCTCAGACAGCAAGTTCTCTTCCACAGCCCTGCTCTCCACCTCCTTCCATTTTAGGGGTGGCCTCCTCAACAGCGCTGCCTCTGCTCCACCCGACAGGTGCGAATAGGGGCAGCTTCTCATGGGAAATGCAGCGTGTATGACACGGAGTGGGGGTGGAGGAAACTTTGCTACTCTGTTCAGGGAATGTCTCCAGGAATATTTTTGGAATCCAGCCTCTACTCTCTTAGGATGGGAGAGGGAACCTATCCTTGGCTCAGATGGCTGGGATCAGATGAAGAGGAAAATTCCCATTAGCCTAGAAAAGTGCTGGGCAGAATCCAGTTTGGAAAATTACAAATCCATTGGTCAGAATTGGCTGTACCCTATGTGACCTATTTGTGGTATGCCAACTGGACTGCTTCTTTAAACAGGGCAAGGGAAGTGTGGAATAGTTTTATATGAAAGCCTTATTAGCCTGTCTGGCGCCCATGCAAAGAGCTATTTGCACACTCGTACTTTCACCCTGTTTCTGCACTCACTGTAGCACAGTAGAGGTGAATGCTGGGAAGCACTCAGTTTCCAGTGACATGTTTTCAGTGACCGATGTCAGAGGCAGGCTTGCTTCTGGACTTGCCTCATTAATAGCCAACACTCACCGTTTTCATGTAACAGCCTTGGGACAAATGTCACATCTTCGTTATAAAGTTCCAATAGGAAAAAGAATTTTTCCCTTCAGAGGAGGAATTCTTGTGTTCTGTGCTTGCAAATTATTTTCATCTCACAGCTTTCACAGGATTTCAGTGTATCAGTACCAAGGAGACAGACTCACGAAGTCCCTGTATTTGTAGTAATCTCAGCATTTGTGAATGTGCAGGGCTTTTAAAAACCCAGCTCTTCCACTAAGGTGGGGCTTGACACTGACGTGCTTGAGTGTTCACTCTGCTAGTAGTCAGCGTCCCTTTCCTGGCTTAGTGTCCTACTGTGTCACCTGGCCAGTGTCACTCATGAGTTCTTATGCCTCCAAACAACGCAACACAAATGTTTGCTCCCCACATCTAGGTCCTCCTCCAGGACTTAACTGGGCTGCACTGCTGTAACAGAGTGGCCAGGGTTTAATTTACATCTTCAATTCTGATTAAAATCAGTTTTATGTGAAGGACAAGGTCAAATCTCCATTATTAAGGAAGTTAAAGATTCCTTAATACTCTTTGATCAGGCTCAGTGAGACAGTGAGGCTGTGCTGTCCAGATCTATCTCCATGAGTTATTCACCTTTTGTTAATCTGTGAGGACTCTGGTCTGCTTTGGGGCCGCTGGCAGGTGACGTGGTTTTATAACTTAGTCTTAACATGTCTTAAGCAGCTCAGAGTTGGGTGTGGCTTGTGTACCATGGGCTAGAGGAGCAGAACTTAGCCTCAACTCAACTCCACAGGTGGGTCAATCATTATCTAGTTGTTACTAGGGGTACAGCTGAATTCAGCTGGCTGCAGGAACAGGAAACAAAACCAGCCTGACCTGATTCCTGACTGAGTAGGTACAGAGATTTGGTCAGGCCAAGAAAGTAATGGTCAGATAGGAGCAGGTGGCCCATGCAGAGTTCTGTGCTGAGGGATACTGAGGACCTCCCACCGTGGCTAAAGGCCCTGTTCTTAACAAAGATCCTTTCTTTCCACATCCCTATTCCAAAGCCTATCATCTTCTAGGCCTGATTCCACTCTAAGTTACTTAACAACTACAGTAACTGTTTCTGAGAGGTTTTCTGGGAAGTATGAAATGCACACGAGGAGACATCCCCAGAGTTCTGGACAGAAAAGCTGCTCAGGTTTTCAGCCACCCCCTTGCCACTCACTAGCCATGTGCCTTTCTACAAGTTAGCCTCTCAAAGCCTGTTTCCTTAGCTGCTCACCCAGGAGTGTGTACTAAGGGTGTCCCCACCAGCCCTTAAGGGGACTACCATGTCTGGAGCCCAGCAGGCAGGCCTGGGGGGTCATAGGAGCTGGTGCTACTAAGTGACATCATGCTGGCCACATGGGACTCCCCTGTTGTCCTGATAGAAACCACAGCTGAAAGCCTCCTGAGATTTAGGGGCTCTCCACTGAGCCCCAGTTCACCTGGCTCCCTTCCCTTTCCCCTCCTGATCTGCCTCAGTCATTTCCATTTACCTTTGCCCACTGTGCTCAATGTGGTTTCGCTCAGCGCTGAATATTCCTTCTAAATTCTTTGAATAGGTAATCCCTTCACGTGGTTCACAAATCATAAAGTCGTCCTTGCATTCCTGAACTCCAGTAAGCCAAGTTTCCCACCCCTTGAGTACACACTATTAGTTGGTTCCTTGTGAACCTTCCAGAGTTCGTTCATGCATATACAAGCAAGTACACACACACGTACATGTGTGTAGGTATGTGTGTGTATATGTATCTATATATACACAGCTGACTCTTGAACAACAGAGGTTAGGTGTGCTGACACTCTGTATGGCCTGCATGTAACCTGACAGTCAGCTATCTGTATCGGTGGTTCTGCATCTGTGGATTCAACCAACCTTGGACCGTGTAGAATGTATTTATTGAAAAAAATCCATGTGTAAGTAGACCTCAGTTCAAATCCATCTTGTTCCAGAATCAACTGTATGTGTATAATTTTTTATTTTTCCACTTATGTAATACCAGACAAGTACTACTCAAGAACCATTCCCAGTCATGGGAAGACCCATCCCAGAAGTCAGAATATCTGTAAAAGGTGAGCCAGAATTGGGGGATGTTTTTGTAATCACATTCCTTTTTAATAAGGCATATTTTCCACTGATTGCAGCATGATGAAATCTTCATTTCCTACACAAATCGAACTACAGTCCCTCCCTGACCCTAACTACAGATGCCCAAATAACAAGAGAGCACAACCATTTTTTTTTTTCCTTTCCCCCCATGTGGGATGTGGGATCTAGTTCCCCGACCAGGAATTGAACCCGGGCCCCCTGCACTGGGGAGAGCAAAGTCAGCGGCAGCACAGGCTGCAGGCCCACCCCAGCCCCCAATCCAGTTTCCAGCGAGGACTGACAGCCCAGCAGTGACATCTGGCTACAACTGCCATGGTTTCTTATGCAAACCCATGTTTCTGAGGCGGGAGTTGGAGCAGCAGGCTGAGCAATTCGTTTTGTGGGGCAGATATCTCAAATGTTGCTAAGCAAATAGGTGGTCAGCTGCCGTATAGCTGAATGTTCAAGTTCGTGAACCTATTCCCTTTCCCTCCCAACTCTATGCACACACTAAAAAGCAAATGTTCCCACAGAACTTTCTCCTCGCCCAACATTTTTTCCAGTCAATGAGAAATTACCCCACCAATTTTTTTTAAGTTCATTCTTCCCTCTGCAGATCAAAGTTAAAGATTCTTCCTCCAGGCAGCCCTTGGCGGGAGGGGCAGGGACCTGTGCCTCTCATTCTTTACCCACCTCCCCTATCCTGCCACCCACAGCAGCAGCCCAGGGATTCACTGGATTAAAAGTGTAACTTAAGCCTGTGACCAGAAATTTGGAAAGGAACTATGTGTGAAACCACCCTTCTTCTATCCGTGAACCTCTTTCATTATTAGTATTTAGGAATTTGAGCAAAGGAGATGAATGTGTCTCAATTCTGATGAAATCTGCAGTTGCTAACTGGAAAATGCTGGGCCACGTTCCTTTAGTGTCTTAATGAAGGCTCCAGTGTGCCACAGAATGTGCTTCCATTTGATTGGAACATGAGGAGGAAAATAGAGAGGCTTATTCAGTAAATCTGTTATTGTTCCAGTTCAGCTTCAGAGCCTGAATTGTTATTGCAAGATGCAGAGTTTTATTCCACTTTTAGACCAAGCATCAGCACATGTGGCTTACCAACCCAGAAATCACTTCTGTGGCTATACAGTCAGGGGCTCCCTGCTCCAGAGACACATACCTACCAGCATCAAGGGCCTTGGCTATACTTCGATGAAGCCCCTCGCAGTTCCCTGAGCTAGTACAAGCCTGGAAAATCTGCATCTCAGGCCAGGTGCACACCATCCCTCCATCCATCCTTCCCTCTCAGGCCCAGAACAGGAGAATAAGATGGGGCTAGTGTTTCTTTCCTGATGATAGCTCAGTCTTCCAAGAAAGTGTTCCTCAACTGTCCTCTCTCGGTCTCTTGACAGATCTTTGCCAGAAAGAGGGGATATTAGTCTTGTAGTTTTAAGCCTACTGGGGTTTACTCACTAGATATTGTATAACTCCTTCAAAAAAAAAGAAGTTTATGAAACGCTGAGCCTCAGGTTTCATAGACATGTTTGTACACTATGAATTCTGCAGCAGAATATTTTTAAACATTTGCGGTTTTTTTATAAGCTATATATTTTTGTATATTTAATTGCTATTTTAAAACTTTAATGCATTTTGCTAATTACTCATTTAAAAAATAAAACATGCATGTAATTGACTTAAATGTAAATAAAAAGCAGATTTAAAAAATACTTTGTGCTAAGCACATACATACCCTTGGTCACCCACATCCCCTTTAAGCCCATGTGGCAAGAGCTGTAAAGTCAAGGTAAGTGCTTCTGAACAAATGGAACTGATCACCAGCAACAGGTGACTGAGGGAGCCGCCAGCCTGTCTCCTTGTGGTGTGGGGTGCCAGTCAGGGATGAGTAGTACAGCATCAGGCCACAGCAAGGGAGAAGGCAGAGAGGCCAAGGGCTCCCTGCCACCCTGGCCTCAGCACCGGAGATGTGGGGGGACACAGTCAAGCAGTCTCCCGAATGTGGACGCCAGTACTCAGGAGGGTTGCAGTGGTGGAACCAGCCCACACCTCACTCCTCTAGCTATATCCCAGGCCTGGACATGCCAACTATTCTGTTGGAGGAGAAACAAAATCTCAGTCCAAAGCCATCCTGTGGCAGCTACTGTTTCTACTCACCATCCTCACTCCCTAGGACCTCTGCACAGCTCAGCTTTGGCTCCACAGCTTCAGGGAAACTGCTCCCCTCACGGTCATCCATGACCTGCAACCAAATCTGTGCCAACTCTGAAACCTCCCCTAGTGGAAGTGCCTGCAGGGTTCCTCTCTCCTCCAGTCTCCTGAGCCATGGGCCACCTGCGCTAGTCCCCTCTTCAATGTTCTTTGCAGCCCTGTCCTCCTCCGCCCATCTCTGGTTCCATCACTCTACCTTAGGACTCACTAAATCCCCACCTACATGCACATCATTCTCAGGTCTATTGTCCCCAACCTAAATATCCGGCTGCCTATTTGGCATCAAAATTCAGGCAGCCCAAGATCAAGCCCCCCCAGCAAGCCTAAGTACCCTCACAGAACCTCCTTCCCCCGCTTCCAATCTCCACATCTCTAAACCCACCAAAGCACCTCTCTCTACCTGACCATACACTGCTCCCATCTTACGCTGCCCACCTTCCTTTCACACCTGGACCATTATTACAGCCACTACCACCCCCACTGCCTCTAGTGGGGGAGTGTGGGGTGAGACCCTCAGGCTACCCAGGCTGGCAGACTGGAAGGGATAACTGCTGAGATGAGACAGGGCAGGGGTTTAGATCAGGGTGGTGCCTGTGGTGAAGAGAGATTGAGCATCCACGCATCTTACAAACTGGAGTTAGTGAAGTAGCAGTAACTGGGAGAAGATGCTGCCGGAGGTTCAGGGGAGAGGATGGAGACATTTCTGTGTAAAGATGACCTGGAAATACAGAAGAAAAGGGGGAAAGGGGCAAAGGAAAAGGGCAGTCACTGCCTTGAGATGAGCTTAGAGGCAAGGACTAGGCCAGACACGCTACCCTGGAAATCAAAGTGAGTGATGTCTGCTTAAGTAGATCCAGGATTTAGCCTGAGAGCTGGCGATCTCTGTCTTCAGTGGAGAATAAACTGGCAGAGATAAAGTGGCGTAGGAGATAGAAGGAAAAGCAAGTGTGGACTGCAATGATAGAACTAAAGATGAGAACATGAAATGTCCATCAGATTTAGCAATGAGATTCGCTGTAGTAAAAGGATCGGCTAATCAGAAGTACAAAGTGTAGCCACAGAAGCAGTTTCTCCAGAGCAGGAAGTGGTGAATCCATGGAGGTGGAAGGCAACTGCAAGGCGTAAGAGGAAAGGGGGCTCTGCCGGATCCTAAATGTGTGACTTTCGGCAGGTGCCTTCTTCTGTTAGATGGTGGGGATGACAAGGGCTGCATGACATGACCCACAAAAAGCACTGGCACAGCCTCACGAACACGTTAAGTCCAAGGAGAAAAGGCAGGACCCCACGAGGCCTCAGAGGCCAACCTGGGTGTCCACGGGCAGCAACCAGGCTTACTCAGGCTCCCTTCCTCTGCCCGGTGGAAGTAGCAAAGAGGGTCTGGCGTGCAAGGGGCTTGAAAAGCATGACTATGGTACCAATGAGTGGGTGGTGGCACTGACTCTGGTGGCCGCGGGGGGGAGTTGGGGCTACAAGCCCATGGTTGGAATGGGCAGAAGGCAGAAGGACAAGACTGGAGGTGACTCAGGCTGAGGCCCAGGAGGGGCAGCAGCAACAGAGGAAGCTGATCACACGGCCCTGGGCGGCAGTTCCCATCCCCCAGTGTCCCTCCAGCTCCACAGCCTGCCCTAGCCAGCAGCACCACCACCTGCACGTGCCCAGGAAAGTGTGCAAGGTGGCCACCCTTGGGAAACGGCGCTGGGCTGACCCCGCGCAGGCTGTGCCCTCCCTGCAGGTGGGCAGACCATGACTCTCGACAACAGCCGAGAGGGAGGGGACTGTGGGGTCAAACTCCCTCCTCCCTCAGTGATCCAACCCCACTCTCCTGTGCCCCTCTGTCCCTTGGAACATTGCCTCCCATATGTGGTCCCTCCCAGGCCAGTCTCCTCGCCTGA EMBV3_20490 CAATTGTTGCTAGAATGGGGATGGAAGACTCCCTGATGCACACAGCCTGCACTTCCTGAG Gene GeneID:614564|ZNF79:XM_002691625:302_cdna Constitutive 1 NULL GeneID:614564 11 GENE ZNF79 NULL zinc finger protein 79 EMBV3_18547 TTTGTGGCAATGTGACAGAGAGACCGCATGTCCCGCAAGTGTTTCTGTACGTTTGGGTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06387 TGTGGGGTTAGCTCAAATTCATGCCCATTGAGTTGGTGATGCTATCCAACCCTCTCGTCC Gene GeneID:533620|ANKRD26:NM_001113767:112_cdna Constitutive 0 NULL GeneID:533620 13 GENE ANKRD26 NULL ankyrin repeat domain 26 EMBV3_31294 GGCACGAGTGATCCTCTCATGACATCCAGCACAGTTCAGAGCAACTGTCTTCTATCAAAG Gene GeneID:534328|CADPS:NM_001076020:2_cdna Constitutive 0 NULL GeneID:534328 22 GENE CADPS NULL Ca++-dependent secretion activator EMBV3_05042 AACAATCTGTGTACGGGAAGGGGTCACTGGATGGGCACAGGGCGATAGTGACAAGTTAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21817 CTGGAGACGAGGAGGATGGGAGCCCCATCGACAAATCTGACCGCCCCGTCTGCCGACACT Variant GeneID:525344|PRR3:NM_001034554:147_cdna 129^482 2 EMBV3_13980 GeneID:525344 23 GENE PRR3 MGC128443 proline rich 3 EMBV3_19561 TCATCAACACCTACATCTCCGTGCCCAAAGAGAACAGCACGCTCAACTGTGCCAGCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34427 AAACTGCTGACACAGCCATTCCATTTCACTGAGTTTGACAATTATGCGGAGTGGGACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08268 GCCGAAACTAAAAAAGATCCAGAAGACACGGGCGAGGAAAAGTCAGCCGCCCCTTCAGCC Variant GeneID:504895|BCAS1:NM_001077850:859_cdna 223^357 1 EMBV3_19214 GeneID:504895 13 GENE BCAS1 MGC152145 breast carcinoma amplified sequence 1 EMBV3_14331 TATAAAGTGTCCAACCTCCACCCAGGCTCTGACCCCACAAAAACAGATGCCACAATGGTG Gene GeneID:508356|ITIH1:NM_001075353:121_cdna Constitutive 0 NULL GeneID:508356 22 GENE ITIH1 MGC140532 inter-alpha (globulin) inhibitor H1 EMBV3_07277 GTGGAGAGGAACCTTATCAGTGTAACGAATGCGGCAAAACCTTCAAAAGGAGCTCAGCCC Gene GeneID:506448|ZNF397:NM_001075262:76_cdna Constitutive 0 NULL GeneID:506448 24 GENE ZNF397 MGC139244 zinc finger protein 397 EMBV3_32889 AGGAAGGCGCACCCCTCCATCAGTCCACGCGCCAAGATAAAACGCCCTGCAAGAATTTCT Gene GeneID:781658|CORT:XM_002694046:127_cdna Constitutive 0 NULL GeneID:781658 16 GENE CORT NULL cortistatin EMBV3_20974 GGATATTTATCCGCCTTCTCTCTACTGTCTTCTTTGCCTTAAGGGACACTTTTAGCCATC Gene GeneID:787049|FAM122B:NM_001083794:26_cdna Constitutive 0 NULL GeneID:787049 X GENE FAM122B NULL family with sequence similarity 122B EMBV3_05635 ACTCAAGAGTCTGATGTAATGGTTGGGCCCTTCAAGCTGAGGTCCAGAAAGCAGCGGACT Gene GeneID:614497|PALM2-AKAP2:XM_002689920:51_cdna Constitutive 0 NULL GeneID:614497 8 GENE PALM2-AKAP2 AKAP2 PALM2-AKAP2 readthrough transcript EMBV3_27489 TTCTTCAATACATCAACATGGATGAGCCATAGGGCCTGCTGTCCACATCTCTTCCCTGAG Variant GeneID:540065|ERAS:XM_002700076:153_cdna 292^838 1 EMBV3_01232 GeneID:540065 X GENE ERAS NULL ES cell expressed Ras EMBV3_07677 GCTCCCCTGGCCACATGAGGACGGAATCAATAAGCAGGGGGCTTTTTTAGCCTTTAGGAA Gene GeneID:281291|M6PR:NM_175779:7_cdna UTR3_Alt 2 NULL GeneID:281291 5 GENE M6PR CD-MPR CDMPR MGC140730 mannose-6-phosphate receptor (cation dependent) EMBV3_10911 CCAGAGACTCGTCACCCAGGCTCAGAACAGATGTCAAACGCCTCACCTTTTGGCTACATA Gene GeneID:511062|WDR67:NM_001046073:26_cdna Constitutive 0 NULL GeneID:511062 14 GENE WDR67 MGC137686 WD repeat domain 67 EMBV3_28222 CCCGCCCCGCGCCCATGGCCGATCCGGATCGACTCAGATTCAGACACTGAGGCAGGAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21545 CCCTGAATAGCTGGTCTCCAGATGCCAGGAAGGGAGCTAAAGACTTCATAGTAAGTGACC Gene GeneID:512633|MFSD2A:NM_001101959:140_cdna Constitutive 0 NULL GeneID:512633 3 GENE MFSD2A MFSD2 MGC152452 major facilitator superfamily domain containing 2A EMBV3_11800 TGCTTTTGTATGGTGAACCATCTTTGCATTCCAGATACAAATCCCACTTAATCATGTGTG Gene BVV0102_094591 + 0 NULL GK000004.2:31977782-31983328 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186734 1 XLOC_112786 NonCoding TCONS_00186734 XLOC_112786 NonCoding NonCoding - 4:31979982-31985561 - TSS139102 5579 1 TCONS_00186734_13 119 0.7443986377487 1 0 0 1.80111817877283e-06 0 1.33961924111142e-05 0 0 1.04529620287162e-06 9.57103258985478e-07 8.48553095505974e-06 8.56234584797656e-05 0.000107367661265561 0.00024226725418917 8.80739084234816e-05 0.000390477528645359 0.000225347276025836 0.000985169849135901 7.43964106421251e-05 0.000388273938431601 0 4.654788511899e-07 0 0.000106408672187403 0.000361971081507766 0.000611758349922899 6.20941641252818e-07 4.20951776766403e-07 0 0.000126111985117462 4.00272267219821e-05 0.000203796783551746 XM_005206391.1 VDR PREDICTED: Bos taurus vitamin D (1,25- dihydroxyvitamin D3) receptor (VDR), transcript variant X1, mRNA. 4e-122 444 94.20 0.0521598852841011 0 noncoding 0 0 0 0 -0.22019411945425 0.13304775624626 -0.0105615894212613 0.820071515743757 TTAGCTACAGAGTATGTATATTGTTCATAAAAGTAAAAGAATCCAATCTGTTGTCCAACAACAGGAAATTGGTTAATCTGGTAGATTCATATATTGGAGTACAGCTTTTTTAAATGACCTGGGTTTTCATTCTGTAGTCAATGGGCAAAAGCTCATTATTTATTATTTTATTATTATTACTCTAATTGCACTGACTGGGACACTCAGTACTGTGTTGAATAGTAGTGGTGAGAGGGGGCATCTTTGCCTTGTTTATGATCTTAAAGGAAAAACTATCTTTCATGATTGAATATGGTATTAGCTGTGGCCTTTTCATGTATGGCTTTTATTATGTTGAGGTAGTTTCCTTATTTTCCCCAGTTTGTTGAGTGTTTTTATCATGAAAAAATTTTTACTTTGTCAAATGTGTTTTTATGCATCAGTTGAGATGATCATATGGGTTTTGTTCTCCATTTTGTTAATGTTGTATATTTATACTGATTGCTTTTGTATGGTGAACCATCTTTGCATTCCAGATACAAATCCCACTTAATCATGTGTGAATACTTTTAATGTGCTGTTGAATTCAGTTCACTAGTATTTTGTTGAGGATTTTTGTATCGTTACTCATCAGGAATATTTGTCTATAGTTTTCTTGTGTCTTTTTTTTCTGGTTTTGGTTTCAGAACAATGCTGGCTTCATACAGTGAGTTTGGGGATGTTCCCTCCTCTTCAATTCTCTGGAAAGATTGGTATTAATTCCTTAATTGTTTGATAAAATCCTTCAGTGAAGTCATCTTGTCCTGGTTGGGCAGTGTTTGATTACTGCTTCAATCTCATTATAGGTCTGTTCAGATTCTTTACTACTTGATGATTTAGTTTTGGTAGTTTGTATGTTTCCAGGAATCAATCCATTTCTTCTAGGTTATCTAATTTGTTGATATTTAATTCTTCACAGTAATCTTTTATAATCCGTTTTTATTTCTGTGACATCAGTCATAATATCCCCTCTTTTGATTCTAATTTAGTTATTAGAATCTTTTAGCTCTTTTTCTTAGTTAATGTAGCTAAGGATTTGCCAATTTTTGTGGTCTTTTTAAAAGACCATGTCTTAGTCTGCTCATGCCACCATAATAAAACACCATAGACAGGGTGGCTTAAAAAACAGACATTTATTTCTCTCAGTTTTGGAGCGTTGAAGTCCATGTCAGGGTGCCAGCATGGTCAGTTCTGGTAAGAACCCTTTTCTTAGCTTGCAGTTGCCTTCTTGGGTACTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCACAGACGGCAGCCCACCAGGCTCCCCCGCCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCGATGCCTGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCAGACTCCTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCATGGGAGTTTCCAGGCAAGAGTACTGAAGTGGGGTGCCATTGCCTTCTCCATTCTTGGGTACTGAGATGGCCTTTTCTTGGTATATGTGCATGAAGAAATAGATTTCTCTCTCTTCCTCTTCTTACAAGGCTACTAATCCCATCATGAGGTTGCCATCCTCATGACCTAATTTAAACTATCTCTCAAAAGACCCCCACCTCCAAATACCATCACTTTGGTGGTAGGGCATCAACATATGAATTTGGGTAAGGGACACAAACACTCAGTTGGTTTTATTAGTTACTGGTTTTTTTCCACTTTTTCTATTCTCTATTTCATTTACTCTCCTTTCATCTTTATTATTTCTTCTGCTAAATTTAGTTTTTTTTTTTCAAGGTATAAAATTAGATTATTGATTTGAGATCTTCTTTTTAATGCAAGCATTTATCTCTGTAAACTTCTCTCTTATCACTACTTTTGCCTAGGTTTTGATGTGTTGTATTTTGTTTTCATTTGTGTCTAAGTATTTTCTAAGTTCCCTTGTAGTTTATTCTTTGACCCATTGGTTGTTTAAGAGTGTGTTGTTTAGTTTTCACATATTTTGTATTTTTACCTTCTGCTGTTGACTTCTAGTTTCACTCCATTGTGGTCAGAGAAGATACTTGGTATGATTTCAGTCTTCTTAAATTTATTAAGACTTGCTTTGTGGCCTAATATGTGGACCGCCTTGCAGAACGACCATGTGTACTTGAGAAGAATTTGCATCCTGCTGTTCTTGGGTGAAGTGCTCAGTATAGGTTTGGTTCAATTATTCTGTAGTGTTAAGTCCTCTGTTTTTTTATGGATCTCTTTGTTCTATCCTTAACTGAAAGTGGAGTATTGAACTATCCTATTGTTACTATGTTTCTGTCTATTTCTCCCTTCAGTTCTGTCACTGTTTGCTTTATATATTTGGGAGTTCTAATGTTAGGTGCATGTACATTATAATTGTTATATCTTCCTGGTGAATTGACCCTGTTACCATTATATAATGTCCTTCTTTGTCTCATATGATAGTTTTGGTTTTAAAGTCTATTTTATCTTAGTATGTCCACTTCTACTCTCTTTGGATTCCTGTTTTCATGGAATATTTTTCCATCCTTTTAGCCTATGTGTATCTTAGATGTATAGCATGCCTCTTGTAGATAACCTATTAGTTGGTTCTTATTTTTTATCCATTCAGCCAATCTGTGTCTTTTAATTAGTATATTTAACCTATTACATATAAAGTAATTACTGACAGGAAAAGACTTAATATTGCCATTTTGTTCATTGTTTTCTGTATATAACTTTTTTGTTCTTTTATTCCTGCTGCCTTATTTTGTGCTTTGCTGAGTTTTTTATTTTTTTTATTTTTTTGTAGTGACACATTTTGATTCCCTTCTCATTTCCCTTTGTGTACATTCTATAATTTCTCTGTGGTTACTGATGTAATTACATCAAGTGTTTTAAAGTTATAGTATATTTTAAACGTAATTTAACTTCAGTCACATAAAAACTATTTCAGTTCTGCCTCACCCACTTTATGTTTTTGAGACAGATTACCTATTTTAATATTGCATGTTTGTTAACATAGATATATAATTACTTTTTATGCTTCTTTTGTTTTTTAAATTCTGTACCAGATTTAAAAGTGATTTATGCACTTACATTCGAACACTACATAATTCTAAATTTATATTTTTACCTTTACGAAGGAGTTTTATGTTTTTGTCTTGTTTTTGTTGCTCTTTATCATCCTTCTGTTTTAACTTGAAGGACGCCCTTCAGCCTTTCTTTTTTTTTTCCAGCCAGTTTGTTTTCTGTTGATACCACAATGGTCAGATCTTGACCATGTACTTCCACGGTGGTCACAACCATTCCTTTCGTTGCTGCTGTGTGGTTTTCAAATTCTCCTCATACATGTTGAGCTGGCAATGCATAGCACATATTTTCTTGGGCTGCAGTTCCAGGGGCTTGTGCTTTGTGCCCTTGTAGAATTTCCTGATTCTCTTTCTGAGTCTGGTTAATGGCAGTGAGAACAAAGGCAATAGATTTGCAAACAACTCGAGTCTTAGAGAGTTTGGATGCTGTGCTGCCTGGCAGTTCAGAGACATGCAGCTGGTACAGCTCCACCTTCAGGTCATCCATCTGTTTCAGCAACTTGTCTTTCTAGCCTGAAAGTCTCAAGACTTTAATCTTGGCTATGGCTGTACAAGGTTGTTTTTAAAGTACAAAACAGAAGAAAGAAGACGTTTTCTTTACCCAGACATTAGTTTATGTTAAAAATTATTGCAGAAGAAACTCAGGAGGTCAGACTTCAATATTATTCATCAGATTAATATAATTTGATCAAATCAATAATACTCGGCAAATTAATATAACAAAATACCACTTCCTGTCCATTAAATTGGCAAAAATCAGAGTCTTGCAATGATGGTGTTAATGAAGATGTGGTATTTTGGAGACTGTTGTGAGCTGCTGACAGGAGTGTGGATGGGTGCAGGCACTTCAGAGGCAGTTGGACAATATCTAGTAACATTAAAGATGATCATCCACTACAACCTAGAAGTTTTTACTCCTCTGCAAGGCCCTTGCTCCTTGAAGTGTAGTCCTAGGACCAGCAGCATCAACATCATCTGGGAACTTAATACATATGTAGAATTTCAAGCCTCATCCCACTGCTATCAAATCAGAGTCTCCATTTTTGTGAGATTTATGGGAGGATGGTATGCACATGAATATATGAGAAACTACTACACGTGGGAAAAGGAGACTTATAAAACTAAATAGTAGTATTCACAATAACAAAATATTCAAAACAACCAGAAGTTCATGCACAAGGTAGCAGATACACTTTGGTATACTGTGATACATCTGTGCAACTCGAGTTACACATATACACAGCCAAAAAGCACAGGTGGTATAATACACCCCTGAAAGTACAGAGTGTAAAACAATGCTATATATTGTTTATAAACTTATAAACATAGTAAAGGAATAACAGCCTGAGAAAATGAGCACCAGATTTAGAATAGAGTTTGTCCAGGAAAGAGGGAAAAAAAGAATGAGATTAGAAGGCATATATAGGGAGCATTATACCTGTGATTCTTTAAAAATTTAAACATTTTGACAATAGTAGAGTTTTATAGAGTGGGTGATGAGTACATAGCTATCCATTATATTATTTTCTATGTTTTTCCATATACTTTAAATAAATTTACAAATTTTTAAAGATTTAATTTAGAAGAAAGTCTTCTTTCCCACCCTAAATTGTATTATAAAGTAGCTTTTAGATTTCTGAAGTAATCACTATGAATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCAATGGACGTGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCACAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTGAACTGATGATACTTGTCATTCTAGTACTAAAGTACAAGGAGTACAACTGTTCTAAAGAGCAACCAACTGTGGATGTAGACCATGTTATTTTTGCTGCTAATGAAATCCTGAAAGTAATTAAAATGTTTGTGGAGCAAAATGGAAATCATTTTTTATTTACTTGTTTGGGAAAGAGTATGTGTTTGTCTCTCTACTTATACCTGATGAGGAAGATAATCTAGAATCAATATGATAACCAGTTACCTTAAGGTTCTTTTCTCAACCACATGTTATCAACCAACTGGAAATCTATTCTTATTTACTTGGTCATGTATAATGTAAACAGCATTTAACCCTGTCAGGATTGAAACAGAGAAATAGAGGAATTATAATATTTGTGTGTGTGTGTGTGTATTTGTGTGTGTGTAAACACAGTAAGTATCAAGCTTTTTCATTTGGAAACCTTCTAGTGATTCTATATGACTCACACCTCCCCTACACTAAGAAAAAAAATCAAAAGAAGACATGACTTTACTGGAATTATTCAGAAGCTACTCAACTGAGGGACATTTATATACATAATTCAGTAGAGAAAAC TCONS_00181170 TCONS_00181171 TCONS_00181173 TCONS_00181174 TCONS_00181175 TCONS_00181176 . 3' 234 TCONS_00181170 TCONS_00181171 TCONS_00181173 TCONS_00181174 TCONS_00181175 TCONS_00181176 . 3' 5812 EMBV3_26817 CCTTATATACCCAGAAGGAGAGGCTAAAGCCCAGCATTGGTAAAAGGCGAAGGATGCACC Gene BVT0102_084186 + 0 NULL GK000026.2:24183817-24211953 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150605 1 XLOC_091909 Coding TCONS_00150605 XLOC_091909 Coding Coding TAF5 26:24209578-24220357 j TSS112766 3676 1 TCONS_00150605_11 431 0.438520130576714 5 0.659398775282984 3.01564145089448e-11 3.72366195896395e-11 4.2507656498727e-06 8.09984793546057e-06 4.95436733198329e-06 5.32974860958193e-06 2.83495175867711e-06 1.1362603434236e-05 6.99896458412261e-06 9.24455376954948e-05 7.33733858180426e-06 3.69452577178683e-05 2.37095164992161e-05 3.18702727712194e-07 9.89387284795494e-06 0.000226154821841895 0.000735721102022806 9.26269626403204e-06 6.55525662379563e-06 9.20311525728899e-06 1.66111472401996e-06 0.000593003873522146 6.86658044199248e-05 0.000324157357450299 2.12082803309461e-11 1.00814041866833e-11 3.74090828762566e-06 0.000323972552227413 7.9236636203575e-05 0.00121451294526977 NM_001191478.1 TAF5 Bos taurus TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (TAF5), mRNA. 0.0 2325 100.00 0.35038084874864 NM_006951.3 TAF5 Homo sapiens TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (TAF5), mRNA. 0.0 1952 93.31 0.353373231773667 TCONS_00150605_11 sp|Q15542|TAF5_HUMAN TAF5_HUMAN Transcription initiation factor TFIID subunit 5; 0.0 648 93.68 0.988399071925754 0 coding GAATACCAGACCACTTTACCTGCCTCCTGAGAAATCTGTATGCAGGTCAAGAAGCAACATTTAGAACTGGACAGGGAACAACAGACTGGTTACAAATTGGGAAAGGAGTATGTCAAGGCTGCATATTGTCACCCTGTGTATTTAACTTATATGCAGAGTACGCCATGCAAAATGCCAGGCTGGATGAAGCACAAGCTGGAATCAAGATTGCTGGGAGAAATATCAATAACCTCAGATGACAGGTTACAGATGACACCACCCTTAAGGCAGAAAGGAAGAGGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGACAGTGAAAAAGCTGGCTTAATACTCAACATTCGAAAAACTAAGATCATGGCATCCAGTCCCATCACTCCATAGAAAATAGATGGAGAAACAATGGAAACAGTGACAGACTTAATTTTCTTGGGCTCCAAAATCACTGCAGAAGGTGACTGCAACCCTGAAATTAAAAGACACTTGCTCCTTGGAAGAAAAGCTATGACCAACCTGGACAGCATATTAAAAAGCAGAGACATGGCCAACAAAGGTTCATCTAGTCAAAGCTATGGTTTTTCCAGTAGTCATGTATGGATATGAGAGTTGGACTATAAAGAAAGCTGAGCACTGAAGAATTGATGCTTTTGAACTGTGATGTTGGAGAAGATTCTTGAGAGTCCCTTGGAATGCAAGATCAAAGCAGTCCATCTTAAAGGAAATCAATGCTAAATAGTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCATCTGATGCGAAGAACTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGACTGAAGGCAGGAAGAGAAGGGGACGAGATAGGATGAGATAGTATCCTCTGGGTGGTATCATTGGATGCCATCATTGACTCTATGGACATGAGTTTGGGTAAGCTCTGGGAGTTGGTGATGGACAGGGAAGCCTGGAGTGCTGCAGTCCATGGGGTCACAAAGAGTTGCATACAACTGAGTGAATGAACTGAAATGAACTGAGTCTAATTTTTAAAATGAAATTTTAAAATAAATTTAATCAGTCATACTGAACATTTTATTTAAAGAACACAATATCAAATATCAGAGTGTATTTCATGTGATATTTATACATATCATTGTTAAAAGTTGTCACACTTATAAATATCCACATATATATGTGAGTCTTGGGTTCTGGTGTTAAACATATTTTTATTGTGAATCATGGCCAAAAAAATTGAAAACTCCTGGTCTAGATCAGTGCTGTCCAACAGAAATATAAGGTGAGCCACATACGTAAATAAAAATTTCCAGAAGCCACAAAAAAAAGTAATAGGAAATTAATTTTAATATTTAACTCATATAAAAATACCTTTCAACATGTTACCAATAAAAAAATTATTGAGCCATTTTATATTCTTTTTGTCTTTAAAATCCAGCGCATATCTCACACTTAGAGAACACCTTAGCTCAGACTAGGTACATTCAGTGGCAGTAGTCAATAGCCACTCCTGTAGTAGTGCAGGTCAGTTTTGCAATTACCTACCTTAGGAGGCAAACTCTAAATTCACTCTTAGCTGTGTGAATTTAAACTTAGGAACTGAACAAGATTGTAAACTCACACTAGTGGCTACCTCTCCCATCACACTCAACCCTAGAGATGGCACTGAAATTGATAGATCAGTAAAAACTGAAAACTCTGAGGATGTGTGTGTGTGCACATGTGCACGTATGTTGATAAATAGGGAGTGATGGGGCTAATGGGGCCAACACCTCACAGGTTTTCTTGTTTTGGGTGCATCCTTCGCCTTTTACCAATGCTGGGCTTTAGCCTCTCCCTCTGGGTATATAAGGTAGCTGATACCTTCCGGGAAATACAAATTCATAGAGAAAAGTAATGGGATGCAGAGGGAGGTGCAATTGCTAGTAAAGCAAGAAACTGAACAACTTAAACTAGATGAAATAGATTAAATGCATCAGATGCTACCCAGTTCTCGCTCATCTCCTCCCCACTCTCTGCCCTTGCCCCTCCCTACCCATGTTTCATAATCTTACATTAAGTCAAATTCCATTAGTTTTATATTTCAGTGTTGGGATCACCATGAACGTCATGAAAAATAGCTGGTCTGCAATAAACGTAACTATTATCCAATGCAAATGCAAGAGGCTGTCTCCACGTCCCACTTCCTGCCTTTTTGCCACTCACTTTTGAAAGTTGCTCTTGCTGCGATTCCTTTTTCTCATTCTTTATCGCCCCTCCTACTGCCGTAAATTGCCCCCCAGAGATGTCGTAAAATGCTCCTCCCCGCCCTCCATGTGGCGAAAACGCAATCACGCTTGACGGCGCGAGGTGGCTCAGCCGCAAGATGGCGGCGCTGGCAGAGGAGCAGACGGAGGTGGCGGTGAAGTTAGAGCCTGAGGGACCGCCGACGCTACTACCTCCGCAGGCGGGGGACGGCGCTGGCGAGGGTGGCGGCGGCACAACCAACAGCGGCCCCAACGGCGGCGGCGGGAACGTTGCGGCGGCGTCGTCGGCCGGCGGAGATGGTGGGACCCCCAAACCCTCGGTGGCTGTCTCCGCCGTTGCACCGGCGGGGGCGGCCCCGGTCCCCGCCGCTGCTCCGGAGGCCAGCGCTCCCCACGACCGACAGACTCTGCTCGCCGTGCTGCAGTTTCTACGTCAGAGCAACCTCCGCGAGGCCGAAGAAGCGCTGCGCCGTGAGGCCCGGCTGCTGGAGGAGGCAGTGGCGGGCTCCGGAGCCCCGGGAGAGGCAGACAGCGCCGGCGCTGAGACGGCTAGCGCGCTTCTTAGTCGGGTCACCGCCTCGGCGCCCGGCCCTTCGGCCCCGGATCCTCCGGTCAGCGGCGCTTCGGGGTCCGCCGCCGTCTCGGGCTTAGCGACAGGTTCTGTGGCTCCGGGTAAAGTTGGAAGTGTATCTGTGGAAGACCAGCCAGATGTCAGTGCCGTGCTGTCAGCCTACAGCCAACAGGGAGACCCCACGATGTATGAAGAATACTATAGCGGACTGAAACACTTCATTGAATGTTCCTTGGACTGCCATCGGGCAGAACTATCCCAACTCTTTTATCCCCTATTTGTACACATGTATTTGGAACTAGTCTACAATCAACATGAGAATGAAGCAAAATCATTCTTTGAGAAGTTCCATGGAGATCAGGAATGTTATTACCAGGATGACCTACGAGTATTATCTAGTCTTACCAAAAAGGAACACATGAAAGGGAATGAGACCATGTTGGATTTTCGAACAAGTAAATTTGTTCTGCGTATTTCCCGAGACTCGTACCAACTCTTGAAGAGGCATCTTCAGGAGAAACAGAACAATCAGATATGGAACATAGTTCAGGAGCACCTCTACATTGACATCTTTGATGGGATGCCGCGTAGTAAGCAACAGATAGATGCGATGGTGGGAAGTTTGGCAGGAGAGGCTAAACGAGAGGCAAACAAATCAAAGGTATTTTTTGGCTTATTAAAAGAGCCAGAAATTGAGGTGCCTTTGGATGATGAGGATGAAGAAGGAGAAAATGAAGAAGGAAAACCTAAAAAAAAGAAGCCTAAAAAAGATAGTATTGGATCCAAAAGTAAAAAACAAGATCCCAATGCTCCACCTCAAAACAGTTTGTTTTTCTTTCACAG EMBV3_17556 CGGCGTCCCCCCGGGCAGGAGACGGCGAAGGTGCTTGGAACCCAGGCCGTCGGGGGCTTC Variant GeneID:613974|ZFAND2A:NM_001083762:287_cdna 525^676 1 EMBV3_17385 GeneID:613974 25 GENE ZFAND2A MGC157341 zinc finger, AN1-type domain 2A EMBV3_10194 CTTCCACGCAGGGATCAGCTGTCGTGACAGGTTTTATCCTTTTAGGTCCCTTGTGGACAT Gene GeneID:505368|TMEM41A:NM_001075200:57_cdna Constitutive 0 NULL GeneID:505368 1 GENE TMEM41A MGC142889 transmembrane protein 41A EMBV3_02544 GCCACGTCCCTGGCATTGAGAAGAACTGGACCACTGACCTCAACATCCAGGAGATCATGA Gene GeneID:513765|TRABD:NM_001034452:37_cdna Constitutive 0 NULL GeneID:513765 5 GENE TRABD PP2447 TraB domain containing EMBV3_03270 AAGGTGGCTTTGGAGCGGCTCCTGCCGCAGTCCAGAGCACAAGAAAGCAACCAACAAATT Variant GeneID:785267|CCDC84:XM_002693130:567_cdna 173^336 3 EMBV3_09641 GeneID:785267 15 GENE CCDC84 NULL coiled-coil domain containing 84 EMBV3_37021 CAAGCCAGCAACTGCACGAAACAGCCCTGGGAGTGGACTGTGTGAAGGACATTAGTTCAA Gene GeneID:536011|CDON:XM_002699219:49_cdna Constitutive 0 NULL GeneID:536011 29 GENE CDON NULL Cdon homolog (mouse) EMBV3_18769 GTTGGGTTGTCCTGTGGACTGAGTAGGCTTGGGTTCTAAAGAGTGGTCTCAGAAGCGTAT Gene GeneID:515657|HEATR6:XM_002695621:15_cdna Constitutive 2 NULL GeneID:515657 19 GENE HEATR6 NULL HEAT repeat containing 6 EMBV3_08240 TGAAGAACATGGTCAAATCCCTACCAGGAGGTCTAGATGCAGTTGTCACTGAAGGTGGGG Gene GeneID:100336551|LOC100336551:XM_002687738:72_cdna Constitutive 0 NULL GeneID:100336551 5 GENE LOC100336551 NULL sulphonylurea receptor 2B-like EMBV3_29189 CCCCTGGATACTGCTAAAGTCCGGCTACAGATGCTGGCATCGGGAGTCGCCTCCTGGCAG Variant GeneID:281562|UCP2:NM_001033611:46_cdna 463^673 1 EMBV3_11123 GeneID:281562 15 GENE UCP2 MGC127535 uncoupling protein 2 (mitochondrial, proton carrier) EMBV3_36696 GATGCCCTCAGCTGCCTGTGTTTGAGCCAGACTCTTCTAAGCCCATCTTTGGTAAGAATG Gene GeneID:519195|CCDC81:XM_002699049:107_cdna Constitutive 0 NULL GeneID:519195 29 GENE CCDC81 NULL coiled-coil domain containing 81 EMBV3_18159 AACCGTGGAAAGGGCGGAGCGATTAGGATGGATCAAATGGCTATCGCTTGTGGATCTCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05605 GCCTAGCCCTACCGGACTACGAGTATCTGGTTTTAACAGTGTATGTCAGGGAACTCATAT Variant GeneID:505437|C15H11orf49:NM_001038037:33_cdna 99^201 2 EMBV3_16829 GeneID:505437 15 GENE C15H11orf49 C11orf49 MGC133722 chromosome 11 open reading frame 49 ortholog EMBV3_15022 GCCTGGACCAGCCGCTCTTTCAGCACTGGGGTGATGGCCCTTCTGAGAGAAGCAAGTGTG Variant GeneID:525727|LOC525727:XM_002697176:212_cdna 643^778 1 EMBV3_37463 GeneID:525727 23 GENE LOC525727 NULL similar to MHC class II antigen EMBV3_07549 CTCTATTTAACTGTAACTGAGGGGGAACTGTAACTGAGGTCTGGGGATGGGGGGCACCTT Gene GeneID:512106|MAP7D1:XM_002686551:816_cdna Constitutive 0 NULL GeneID:512106 3 GENE MAP7D1 NULL MAP7 domain containing 1 EMBV3_29948 ACTTTTGGGCAGCGAGCAGCCAGACCCCACTTCCAGTCATAGGACACACAGACACTAAAT Gene BVT0101_061774 + 0 NULL GK000024.2:41542377-41576969 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142696 1 XLOC_087121 NonCoding TCONS_00142696 XLOC_087121 NonCoding NonCoding - 24:41548970-41550278 - TSS106907 1308 2 TCONS_00142696_1 62 0.65519877675841 1 0 2.08038258201014e-05 0 0 0.000120626006063809 9.81396562696442e-05 0 0.000325470293277651 0 0 0 0 0 2.19364011855812e-06 0 0 0 0 0 0.000712706367050563 0.000219921509441487 2.32088949851714e-06 0.000102119214337858 0 0 6.88610278243981e-05 0.000113115293516346 9.85484537166763e-05 0 0 0 XR_228539.1 LOC101904248 PREDICTED: Bos taurus uncharacterized LOC101904248 (LOC101904248), 1e-58 232 74.86 0.270642201834862 0 noncoding 0 0 0 0 -1.20891698619138 0.0151134871244583 0.0831111540151437 0.138953584716706 CAGAAACGAGTCCTGTGTAAGGTGCTGTGCTGTGCGGACCTCTTCCACTCGGTGGCAATGTGAGTTTCTCCGTGTCATTGCCATCGGTCGGGCACATTCGTGCTAGTAGCATACAAGGATTCATCGTGTGAACCGACCACGATTCATCCACTCTGTGCAGAAAGCCGCTCGGATGGCCTGGGGTTGCTCAATGCGGGGTTGATGCAGACATCATTCTTGCTGTTTCTTCTGGTGAACACAGGTGTGCACCCCTGGTGGGTACACCTGAAGGTGGCTGCTGGGTCCTAGGGTGTGCTTTATACTCAGAGGTACCAACCAAGACGTTTCCCACAGGGCTGGGACCGATTTAGTGTCTGTGTGTCCTATGACTGGAAGTGGGGTCTGGCTGCTCGCTGCCCAAAAGTCAATAAAGAGCCCAGGTTGGTGGAAAGGAAACTTTGCTTTATTTTGGAGGCCGACAACCAGAGGGGAGGGTGGAATCCTGCCTAGAGGCCAACTCCCCCCTGACTTCAATGGACAAGAGCTTTTAGAGGGGAGGTTCAAGGATGTATAGATGGAGGAAGTGGGTTACAACAGCTCTGATGGTCATCTTGAAATTGGTCACCGGTGGTCTGACCGTCATTATCTTGATTTAAGTATCATTTAACGGTACTTGTTTTAAGTACGTTAGTCTTCAGTTCCAGGGCTCCCATTAGCTTGAGGCCAGTTCTTGGAATTGCTGCAGCTTCTCTCATGGCTACAGTCCGGTCATCATGTGACTAACTTCTTCCATCTGGTGGGGTTTTTCAGGGTCTAAAAGACAGCTCAGAGGAGATGGCTCAGAGTATTATCTATAGCCCTGGAGGAGGAACTAAAGGTCCTTGACTGTGCTCAGTGACTCAGCGATTATTTCTTCTGTTGGACTGCTTTCCTTTGTTTCTGCGTTTTCTCACTTCTCTGATTAAACTTATTCTCTGACTAAAGTTTTCCTACAGACAAAAGGCAGCTGGAGGACATGCGGGGAAAGGACCATAGGGCCCTGCCTTGCTTCAATACCGGCAGCTCTATAATCAAGCTACTGGCATGTTCATATTACTGTAATAATAATTACTACTTTATAACAAAATGCTATAATTATTCAAATAATCAGATAAATATTCAAATGATTAAATAATGATTAATGATAGTTATATTAGTATAATCTCTTAACAACTTGTGTATGGTCAGGCCACTCAAGATGGCTGCCCTCTTGTCCGAGCAGCGCCTGCTTCACCTACATCCTGTGCATAGACTGACCTTCCTATGTACTTGGCCCAGGCCTCAGCTGGT TCONS_00138998 TCONS_00138999 TCONS_00139000 . 3' 6595 TCONS_00138998 TCONS_00138999 TCONS_00139000 . 3' 7902 EMBV3_27230 CTTTCAGCATTAAAGGCAGCACAGGCACTCCCATACTTGGCATCAGTTGACTGTCACAAC Gene BVV0101_031643 + 0 NULL GK000011.2:2897043-2916016 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026665 TCONS_00026664 1 XLOC_015090 Coding TCONS_00026665 XLOC_015090 Coding Coding COX5B 11:2915076-2932794 j TSS19084 1462 2 TCONS_00026665_1 129 0.3406292749658 5 0.917762600891799 0.00279379317529221 0.00165511575481867 0.00348950432672554 0.00122317100547154 0.00246954401014671 0.00124022825191291 0.00268370221950511 0.00269638282635453 0.00147052200470647 6.01973976827489e-05 0.000275326262253843 0.000345636430000551 0.000258190455360031 3.72385451748146e-08 5.35756786712457e-05 0.0385305896727045 0.0313622774888247 0.0264988070394232 0.00825312705817514 0.00796226187113195 0.0018486158386621 0.0185132570536071 0.0161295292489717 0.0183199465873476 0.00202503442597061 0.0033450307948562 0.00112201866842792 0.00221202737596189 0.00270734527990674 0.0063836675022603 NM_001034046.2 COX5B Bos taurus cytochrome c oxidase subunit Vb (COX5B), mRNA. 0.0 847 100.00 0.320109439124487 NM_001862.2 COX5B Homo sapiens cytochrome c oxidase subunit Vb (COX5B), mRNA. 8e-156 554 84.36 0.344733242134063 TCONS_00026665_1 sp|P00428|COX5B_BOVIN COX5B_BOVIN Cytochrome c oxidase subunit 5B, mitochondrial; 7e-93 268 100.00 0.992248062015504 1 coding 1 1 0 0 -0.626955264296809 0.0636893882112041 -0.00183924443983965 0.970825305532244 CTAAAGGGTTGTTTTGTTTTTTAAATCAGGAGCCTGCTCCCGGAAGTGCTGGTGTTTGTAGCGGGCGTGATGGCGTCAAGGTTACTCCGTGGAGTTGGAGCTTTGGCCTCCCAGGCCCTGAGGGCCCGGGGTCCAAATGGAGTCTCCGTGGTGCGCTCTATGGCGTCTGGAGGTGGTGTTCCTACTGATGAAGAGCAGGCGACTGGGCTAGAGAGGGAGGTCATGCTGGCTGCTCGCAAGGGACAGGACCCATACAATATACTTGCCCCAAAGGCAACCTCAGGTACCAAGGAGGACCCTAATTTAGTCCCCTCCATCACCAACAAGCGGATAGTGGGCTGCATCTGTGAAGAAGACAACAGTACTGTCATCTGGTTCTGGCTGCACAAAGGCGAGGCCCAGCGATGCCCCAGCTGTGGAACCCATTACAAGCTGGTGCCACACCAGCTGGCCCACTGAGCCACTGCACTAATGCACTCAGAATATGATGTGGAATTTCTTCTTTCCAGTAAAGACTAGCCATTACATTGGCTTCTCCTCCCATAGTTGGCTGGTCTTATTTTTTTCCTGTGTTTTTGGGGGAAGTGTGGATAATTTTTATGTCAGAAATAGCTATCTGTTGATATTAGCTTCCTATCCCCTTGCTTTTGGACACTGAGATTGTCGATCCCTAATGCAGTGATGACAGTCGGTATGGGGAAAACAGTCGGGCTGACTGGACTTGTAATGTTGGCTTCATCTTCTAGCTTTGTCACTGGGAACCTGTTCTCTGAGGGTGGGTGGTTGTTTAGGAGCTAAATTGTATCTTCTTTGTGACCCCATGGCCTGTAACCTATCAGGCTCCTCTATCCATGGAATTCTCCAGGCAAGAATACTGGAATGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCTGACCCAGGGATCGAACCCGGGTCTCCTGCATTGCAGGCAGATTCTTTACCACTGAGCCACCTGAGAAGCCTAGCTGACGCTCTAGTGGGAGAGAAAGGTGAATACACAGCCACCCTTTCAGCATTAAAGGCAGCACAGGCACTCCCATACTTGGCATCAGTTGACTGTCACAACTACCCTGTGAAATGGACCTTTCTCTTTCTTTGTGTACTTAATTTCTAAAAATTCAGATATAATTTATATACTGTAAAATTCATTCTCGAAGTGTACAATTCAGTGGTTTCTAGTAAATGCACAAAGTTTTGCAATCATTATCACTAATTCCAGAACATTCTCAAAAGCCAGTACCCATTAGCATTCACCCCCTCTTCTCTTTCCCACCTGCTCCTGACAACCACTAATCTACTTTCTGTCTACGAATTTGCCTATTCTGGACATTTCCTATTTGTTGAAAACTATTTTTCCCGTTGTCTTTGTGCCCTGTTGAATATTGACCACTAACGTATAGGGTTATTTCTGGACTCAGATTATCACCTTACAGAGGTTCA EMBV3_10103 AAAAGTGTCCCCAGAGGTACCCATTCTTCTCAATGTCTTGCACCATCTCATCCCACCAGC Gene GeneID:522054|LOC522054:XM_002693181:154_cdna Constitutive 0 NULL GeneID:522054 15 GENE LOC522054 NULL similar to rCG39546 EMBV3_35342 CTCACTTTTCAGTGGGCGGCTGGTGCGTTCAGATGTAGCCATGACTGGTGAAATCACACT Gene GeneID:541085|LONP2:NM_001034723:393_cdna Constitutive 0 NULL GeneID:541085 18 GENE LONP2 MGC128838 lon peptidase 2, peroxisomal EMBV3_33450 GCTCCATCTCCCAGCAAAATATCCGCTCCCAGACCTGAGGCAGGCCCTGAGAAGCCTCAC Variant GeneID:509212|PIH1D1:NM_001075395:169_cdna 754^806 3 EMBV3_33189 GeneID:509212 18 GENE PIH1D1 MGC142550 PIH1 domain containing 1 EMBV3_02758 GTCAAAGCTGTCTGTAAGAGTCCTGCTGTTGCCTGTGATCTCAAGGGAGGCAAATGCCAC Gene GeneID:100140137|RNASE10:XM_002690744:472_cdna Constitutive 0 NULL GeneID:100140137 10 GENE RNASE10 NULL ribonuclease, RNase A family, 10 (non-active) EMBV3_31245 CTGGCAGCCTCAAGAAGCTAGAAAAGGCAAGACCATGGATTCCCCCCAGAGTTTCCAGAA Gene BVV0102_046261 + 0 NULL GK000013.2:32751888-33005027 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042491 TCONS_00042490 TCONS_00042488 TCONS_00042487 TCONS_00042489 1 XLOC_025675 NonCoding TCONS_00042488 XLOC_025675 NonCoding NonCoding LOC100847741 13:32753345-32792502 = TSS31606 443 1 TCONS_00042488_1 61 0.487584650112867 3 0.988762897129431 0.010243304229689 0.0064856949649095 0.00862630856941806 0.003653337579398 0.00589859148989202 0.00159714038223119 0.0042462818156053 0.00469191434960637 0.00686956222699637 0.000539150604395054 1.37663894554287e-05 0.000251384215779146 0.00155728490828433 0.000789017718229782 0.00124465233825168 0 0 0 0.0043165406867377 0.00440983025527501 0.00228908922313824 0 0 0 0.00260051388068097 0.00412891628086338 0.00413258288378285 0.00012995151619371 8.7658739841897e-05 0 XR_227492.1 LOC100847741 PREDICTED: Bos taurus uncharacterized LOC100847741 (LOC100847741), 0.0 800 100.00 0.997742663656885 XM_005254900.1 ISG20 PREDICTED: Homo sapiens interferon stimulated exonuclease gene 20kDa (ISG20), transcript variant X2, mRNA. 3e-16 89.7 80.00 0.243792325056433 0 noncoding 1 1 1 1 -0.468666105894699 0.0450643311632392 -0.729756023486608 0.000694187174436598 CGAGACCTGAGTTCCTAGGTTGAAACCCCAAGCTCTTTCCCACTTGCTTGTGAGCAGACTATCCATCTCGGGAGTTACTGGATGAAGGATGTGCAGGTAGCCCTTTTATTCATCTTTGCCTTGAAAGAAAAAAACAAGCAGTTATGTGTACAAGGCACTGTGATGTCTCAGATGATTTGTAAGAACTGGCTGAAGAAGCTGGTGTCCAAGGCTGTGGACACAGGAAGGAGTAAGAGCCAAGTATTGCTGGCAGCCTCAAGAAGCTAGAAAAGGCAAGACCATGGATTCCCCCCAGAGTTTCCAGAAAGGAAAACAGCCCTGCTGACTCTTTGATTTTAGCCCTGTGAGAACTGTGTCAGCTTTCCAACCTTCATAATTGTAATATAATAAATGTATGCTGTTTAATAAATGTAAGATAATAAATGTGTGCTGTTTTAAAGCCA EMBV3_25714 TTCCTAGAGAGTTGTATTTAAGCTTTTTGCTGTGAAGCATTTTGTACAATCAAGAAAAAT Gene GeneID:514035|LOC514035:XM_002696700:83_cdna Constitutive 1 NULL GeneID:514035 21 GENE LOC514035 NULL hypothetical LOC514035 EMBV3_18676 CTGACGTTGGTTTTTGAGTTCTGCGACCAGCTGCTGAAAGGCCTGGGCTTCTGTCACAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14744 AAGGCTCGACTGGAGATTGAACCAGAATGGGCTTATGGAAAGAAAGGACAGCCTGATGCC Gene GeneID:515069|FKBP3:NM_001038112:244_cdna Constitutive 2 NULL GeneID:515069 21 GENE FKBP3 MGC134043 FK506 binding protein 3, 25kDa EMBV3_31532 GAAGTTCCAAGGCATAAAACACGAGTGTCAAGCAAATGGGCCAGAAGACCTCAATCGGGC Gene GeneID:513267|DSTN:NM_001015586:40_cdna Constitutive 1 NULL GeneID:513267 13 GENE DSTN NULL destrin (actin depolymerizing factor) EMBV3_26358 GTGTACACCAGCAGGACACTGATCCAGTCATAGGCATATAGCTGTCCACACCGAAGAGTA Gene GeneID:508924|BEST1:NM_001080245:64_cdna Constitutive 0 NULL GeneID:508924 29 GENE BEST1 MGC142465 bestrophin 1 EMBV3_03131 TGCAGTATGTGTGACTTGGTGAGGGGGATGCAGAAGGACTCACGTCTTGTGAGTAGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13073 GGATCAGACACCTCTCCGGACATTGAAGAGTAAGTCATAAGACGGTCTCCATCTTCTTGG Gene BVV0102_299163 + 0 NULL GK000019.2:14349580-14446414 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092357 TCONS_00092358 1 XLOC_056870 NonCoding TCONS_00092358 XLOC_056870 NonCoding NonCoding - 19:14351407-14354018 - TSS69521 2611 5 TCONS_00092358_2 65 0.189199540405975 1 0 0 0 0 0 0 0 1.5634632350827e-05 0 0 0 0 0 0 0 0 0.00140360210321586 0 0.000148950327303527 0 0 0 0 0.00139490448457657 0.000659785559808471 0 0 0 0 0 0 XR_226279.1 LOC101906072 PREDICTED: Bos taurus uncharacterized LOC101906072 (LOC101906072), 0.0 4709 100.00 0.999617004978935 0 noncoding TGGGAATGCGGAGGGTCATCAGATCTGTCTGCTTGGTTCAGGTACCAGGGCTGAAGCCCAGATGTTGTTGATCCAAGTCAGGCTGCTAAGGAGCCTGTCGTTGTTATTTAGTCCCTAAGTCATGCCCTACTCTTTTGCGATCCCATGGACAGTGGCCCTGCCAGGCTCCTCTGTCCATGGGATTTCCCAGGCAAGAATACTGGAGTGGGTAGCCATTTCCTTCTCCAGGGGATTTTTTCCCGACTCAGGGATGGAACCCATGTCTGCTGCATTGGCAGGAGGATTCTTTACCACTGAGCCACCAGGGAAGCCCCGCTAAGGACCTAGGTTGACTTTTTAAATTACAGGGTTTGCTCTGTACTCCTGGACCACCCACGAGAAAGGGGTGGTTGTGTGCACGGAGCTCTGGTGACCTTTACAGCATCTCAGTGTCTTTCCCCGAGAAAGGGGTAAGAAGTTCATAGAAACGAGGGCTCTTCATTTCACCTTATTGTCTTGGAGTTTGTTGTGACATATGGCACCTCCTTGCCCCTCACAGTTCAGCCCAATGGGAGAACATTTTTTGCCTCCCCAGCTTCCCTCAGCAGGGATAATGAAGTGTTCAGAGTAAATGTCCCTGGAGAACAATCGCTTTTTCTCTGTCCCTCACTTGCTATCATGATAGAAGCAGTCAAGTGTAATGAAGATCAGTTTCTGTGTTTAGCTGGGAAAACCCATTAAAAAACCAGCCATCACTTCCCTTTTAACAACAAAGCTTTGATTTGTAGTTCCGACTGCTGTGTGCCCAGTCTGACTCTCAAGCTTCCTTATCTCTCAAAATTCAGGTGTCAGCAAACCCATTCTTCCCCCCTACCCCAGCCAATGGAAACACACAGAACGTTGCCCAGAGCACAGGGAAATTTCCTATGCATGTCCAGGTAATCTGGCTAGTCAAAGTCAGCAGCTTCCTGTAACTCTCTTGCTCAGGTATCGGTATATACTACCTGATGCAATATGGGTGCTCACCAAGTAACTGCAGCTATAGATCTGTGGGCAGACCCATTATCTATCTCTTCATATGGAAATTTAGAAAGAAAAAGTGGAAGGATCCCAGCAGGGGGTCCTTAGGGATGTGGGTCACAAACACTCACCAAATGAATTATCTCAAAAAGCACTTTGGTTAGGCTTCCTCCGAACAGAGGAAGCCAGAACATAAGTGAAATACTCTTGTTTATGCTTCACAAAGGATAAAGTAATGATGGACTGAGACAGTAGCCCCATTTTAAAGAACTGGGAAAAGACGATGTAGGACGTTTTAAAGAGGTGGCTTGGAGCTCCTGTAATAAGTTAAAGAAGGGTTGAGATTGGGGCTCAGGATTTTTGAGTAGGGCTTTAGGATGAAAGAGAAAGGGCTCCAGTTTTACTGTGTTGGGAGACGGGAAGTTGAAAGAGGGCATTCTGCTGTGATTCCACAGCAGAGAATAGAGAACAGATGTTGGCATCAAACAGACCTAAATGTGGGTTCTGCAATCAACTTAACCAGCTGTGCAACTTGGATAAGCTTGCGTTGCATAAGCGTCTGAGCCTCAGTTTCCTTAGGTGGAAAATGATCCTAATACTCTACTGGGTTTTTGTGACGGTGAAAAAATAATGAGTTGGTAACTGCAGGTTCAAGTGTCTGACATGTTTAGAAAGAGACAGCCCATCATGAAAACATGCAAAGAAGTAAGGCAGCTGGTCTTCTGGGGCTCTTTTATTCCCGGCTTTTGTTTTTCTTTTTTGAGTTACTGAATTTAAGGAGAACAGATTAGGTTCTTCTACTCAAACAATGAATCCACTCGTTCACATCCCAAGATTTTTCTATGGGGAAATGTAGTCCCTGATCCAAGATAATTTAAAATCCAGTTGGCTCACTAGTCTATGAAAGTTTTCTGGGCACCGTCTTGGAAGTTTCACAGAAGGGCACTTGTGGTTCCCATGGCCTCGGTCTCCCCCGTAACTTCACAGCCCAGGTGACCCTGCTTTCTGAGCTTGTGCACAGTCTTCTTCCTACTTTCCATGGTTCCCCTGATTTGCTTACATCTGGGGGAACCCAGTCCTCTCTGTTCTCTGATGCTCCCCTCTCCACATTGATTGGGGAGAGTCTCTAGAAAGCCTCACAATGAAAGCATCTCTAGAGTTAAGCATGAATACCACCCTATCCTAGTCTGAAAGTGGTTGGAAGCCTTATTGTTAAGAGAGCAGCGTTGCAGCCTAGAGAGCATTCTAGACTGTGTCATTAGAGCTGAGTTCCCATCTCTGGATATAAAACTCTTTTCCGGGTAACTCTTCACCTCCCCCAAAAGGCTTGGCTGGGCACCTTCTCTGATTCTGCTTTTGAAAGATGGCCATTTAAGTTCCCTGTTTTTTCCATGATTTGAAATTCCAGAATGACCACGTTGTCCATTTCCAGACTTTTGGGCAGATGATACATGAGCTCAGGCTGGAATTCTGAGTAGTACTAGAAATGGGACACCATGGAAAGTAAACTCCAAGAAGATGGAGACCGTCTCATGACTTACTCTTCAATGTCCGGAGAGGTGTCTGATCCATAAAACATGCTCAATAAAACCTTGTTGAATAAATGAGCAAG TCONS_00095288 TCONS_00095289 TCONS_00095290 TCONS_00095291 TCONS_00095292 r 5' 1829 TCONS_00095288 TCONS_00095289 TCONS_00095290 TCONS_00095291 TCONS_00095292 r 5' 1829 EMBV3_14953 GAATCACCTGTAGAGCTTGTGGGAAATGGAGATTGTAGACCCCTCCCCCAAACCATCAAG Gene BVT0102_286986 + 0 NULL GK000023.2:15624463-15685882 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01959 TGCCGTATTCTTTATCTCGGGCCTGCTTCTGCTGATCGCCCTGACAGTCTACACAGTGAA Gene GeneID:618259|CLDND2:XM_002695228:47_cdna Constitutive 0 NULL GeneID:618259 18 GENE CLDND2 NULL claudin domain containing 2 EMBV3_18346 GTGGTTCCAGCCCTTGCTATCCGGTGCAGGACACAATGCGTAAAGAAGCTGATGGCTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35436 AGAAACAAAGGCCTAATAAGTGGTGTGAAGTCACTCAGTAAAGAAGAATTGAGTGCAGAG Gene GeneID:506599|C16H1ORF26:NM_001101873:39_cdna Constitutive 2 NULL GeneID:506599 16 GENE C16H1ORF26 MGC152609 chromosome 1 open reading frame 26 ortholog EMBV3_36095 ATGAAAACTTGCCTACAGAAAGAACGCAGAGCAACTCGAAGATGGATTAAAGCCGCGTGC Gene GeneID:781850|LOC781850:XR_083666:106_cdna Constitutive 0 NULL GeneID:781850 5 PSEUDO LOC781850 NULL similar to THAP domain containing, apoptosis associated protein 2 EMBV3_16377 CTAAGGAAGATGTCACCCCCACCATAGACATTACCCAAGTACCTGCCTGCTGATGAACAC Gene GeneID:407213|SFTPA1B:NM_001077838:257_cdna Constitutive 0 NULL GeneID:407213 28 GENE SFTPA1B SFTPA1 SP-A surfactant protein A1B EMBV3_18691 CGGTGTATGAACACCATACCCAGGACCAAGTTGCCGAGCTTCTTAAAGGAGTGGGATTCG Variant GeneID:404075|TKDP4:NM_205775:805_cdna 107^190 1 EMBV3_13519 GeneID:404075 13 GENE TKDP4 NULL trophoblast Kunitz domain protein 4 EMBV3_24444 CGAGGCATGTGTTTCTGGGCAGACTAAGTACTCTGTAGAAGAAGCAATTCACAAGTTTGC Gene GeneID:508836|SNX10:NM_001075375:127_cdna UTR3_Alt 3 NULL GeneID:508836 4 GENE SNX10 MGC139527 sorting nexin 10 EMBV3_18787 TTAGCATGACAGAAGTTCACTCAGAGATTTTCAGAGCCATGTGCAGGGGCTCACTGGAGC Gene BVV0102_081337 + 1 EMBV3_33239 GK000022.2:17096798-17129451 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128206 TCONS_00128207 TCONS_00128204 TCONS_00128202 TCONS_00128203 TCONS_00128205 1 XLOC_077845 NonCoding TCONS_00128203 XLOC_077845 NonCoding NonCoding - 22:17124746-17129333 - TSS95714 1335 3 TCONS_00128203_3 55 0.6 4 0.709768861753162 0 2.31477639226852e-35 2.98807567058584e-10 1.12091104537822e-47 2.57505364163278e-33 0 1.7747888963601e-09 0 5.4930797696263e-05 0 0 0 7.3507201861974e-06 0.0017946380889343 1.04087584453026e-09 1.73206734438156e-08 0 0 7.66458561761004e-05 5.33091804141531e-15 1.09058037163386e-13 3.16865590362549e-09 3.62463402778855e-09 5.53390842360217e-09 4.59011034135861e-17 0 1.49932503308882e-185 4.04026502860012e-09 0 2.59252704391902e-09 XR_229383.1 LOC101907007 PREDICTED: Bos taurus uncharacterized LOC101907007 (LOC101907007), 0.0 2316 100.00 0.961048689138577 XR_243060.1 LOC101927437 PREDICTED: Homo sapiens uncharacterized LOC101927437 (LOC101927437), misc_RNA. 3e-09 68.0 82.09 0.049438202247191 0 noncoding 1 0 1 1 -0.737159316279487 0.113799956515644 -0.0150296758252686 0.814410739113488 GTGTTCTGGCAGTCCAGTCAGGGAGCTGGGCGTTGAAAGTTCCCAGAGGCTCCTAGGAAACCGCCAACACCTCTGGGAGAGGGAACCCCCTCGCAAAACTGTTAACAGCCACTTCCGCGGTGGGGATTCGTTGGCCGCCAGTGCATTAGGAGTTAGGCCTGGAGAGCAGGACCCAGGATGGAGAACAGAGGCCAAGAGGAGGATTGACTTATACGAAAAGGAAGCAGATGGAGTAGAATAAGCATGACAGAAGTTCACTCAGAGATTTTCAGAGCCATGTGCAGGGGCTCACTGGAGCTGGAGTCTTGAATGAGTCACTTCAACTTTTGGAATCTCAGTGGTTTCATGAATGATTAAATAATGTGCTTTATACTTGAAGCAAGCTAGAAGTGTAAAGAATTGTTCATTCAATTATAAAATGCTTTCATAGCTGTACTGTGTCTCTCCTAGGAAGTACGTGTTTTCTTCAGGACTCTTGGGTTGCAAATGACAGAGACCCAGTAAAAACTGGCATAAGCAGGAATAGGTTCCAGCATAATCCAGCAGTTCATGTGATGGGAATCATATCTCCCCATGAACCCTGCTTTCCCTTCTGTGGTTAGGTCCATGCCCAGGCAAGATATTCCTAAGCCATGGCAAGATATGTCCGTTGTCTTTGTGATCAGAGAATATGGTCTCTGTGAAACTCAGACTTTGGAATTTGTGGAAGATCCATTTGAGGCCTAGTACATGGTTCATTTTCATAAATGTGCTTGCAAAGAATGTGATTTCCTTGTTAATGGAAGGAAGTTCTTTCTATGTCTGTTAGCTCAAGCCTATTAATTGCATTGTTCACATTTTCTAGATCATTACTCTTTTTTTTCCTGTCTACTTGATCCATTCATTTCTAGAAAAATATGTTACGATTGACTATGAAGGGAGATGAGAAAATTTTATGGATTGATGGTAATGTTCTGTGTCTTACCTGGAGTTTAGCTTACACAGATATATACATTTGTCAAAATTCAGCAAACATGCACTTAAGATTTGTGTGTTTCATTGGATATAAAATTCATTACAAATGAAAAAATTGCAATCAGATAATCAACCTTACTTAATGAAGTCTTTGAAAAGTGACTGAATTTACTTTGAAATGCATACAAAATAAGATGGTGTAATAAATGGATAGAAAGGTGCAGAGGTTGATATGTGAAGAAGCAAATGCAGAGTAAAAGTGTTATTGGTAGAACTAGACGGTAAGCATTTGGATGTATGCTCTAAGATTCTTCTAGCTTGTGGTACATTTGAAATTTTTCATTAAAAAATATTGAGGAGGAAAATCTGCCATTATGATTG TCONS_00126344 TCONS_00126345 r 5' 3591 TCONS_00126344 TCONS_00126345 r 5' 119 EMBV3_30910 CCCATAGCCAGTCTCTTCCAGACTCATAGCACCAGCAGTTCCAGAAACATTGAGCACTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42425 GAGCTGCTGTCCGGAGCTGCTACCATGTCGGGGAAATTTGAGATTGTGAACATGGACATG Variant GeneID:511098|LGALS3:NM_001075494:46_cdna 57^171 1 EMBV3_15969 GeneID:511098 5 GENE LGALS3 LGALS2 MGC151898 lectin, galactoside-binding, soluble, 3 EMBV3_10352 AGAAACTGCCTCCGAGCCCTGTGGCATAAGCCCGTGGGTGCCGGCTGCCAAGTCTTCAAA Variant GeneID:517724|GSTT1:NM_001046232:64_cdna 395^571 1 EMBV3_18055 GeneID:517724 17 GENE GSTT1 MGC134566 glutathione S-transferase theta 1 EMBV3_19899 GCGGGATAGTTAGCACAGTTTAAAGAATGCAGGACCAGGAAATCAGAAGACCCAGGATCC Gene GeneID:281795|GNAT2:NM_174326:20_cdna Constitutive 0 NULL GeneID:281795 3 GENE GNAT2 NULL guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 EMBV3_43728 CAGCTTATGAATACTCCTGTTTCAGACAGCCTGGGCAGTTAGGGAGGGAACTCTGCTTCA Gene BVV0102_088314 + 0 NULL GK000019.2:20561594-20567268 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092605 TCONS_00092606 TCONS_00092608 TCONS_00092603 TCONS_00092601 TCONS_00092604 TCONS_00092602 TCONS_00092600 1 XLOC_056930 Coding TCONS_00092600 XLOC_056930 Coding Coding FOXN1 19:20535085-20562864 j TSS69639 3425 1 TCONS_00092600_4 644 9 0.87702498380013 4.54864474949127e-20 4.28015561937145e-07 0.000426032390867134 7.50711179192153e-05 0.00056789300119661 0.000268872844817899 0.000683652221965322 0.000527344858734176 8.62977764583649e-09 0.000420020767512018 5.22810328485565e-05 2.4570619640386e-09 5.73892584942551e-19 4.4294314077567e-06 0.0002892162864766 2.85439312505424e-10 0 1.40166513934345e-08 0.000569408644617407 0.000651363019387685 0.000929609464109292 1.46743948162895e-08 1.57533697720654e-11 1.75049603455968e-10 0.00203053231698658 0.00229841565226563 2.94080100047257e-08 5.39339202587705e-07 2.21499814609426e-10 3.24159165560163e-07 XM_005220109.1 FOXN1 PREDICTED: Bos taurus forkhead box N1 (FOXN1), transcript variant 0.0 5876 99.91 0.952700729927007 NM_003593.2 FOXN1 Homo sapiens forkhead box N1 (FOXN1), mRNA. 0.0 3103 85.37 0.788321167883212 TCONS_00092600_4 sp|Q61575|FOXN1_MOUSE FOXN1_MOUSE Forkhead box protein N1; 0.0 1101 87.19 0.998447204968944 1 coding 0 0 0 0 -1.0716918729666 0.0111059774720937 -0.0311658018455455 0.508072747354877 GCAGCTACCTCCCCTCACCTGATGTCAGCACAGACCCGGGACGGCCGAGCTGACGGACTGACAGACAGAAGGAGCTCCTGGCCCCCTAGACCCCGGCCCCCACGCCGACCTGCTTCACTGAGCAGCCGGCTTTCTTCGAGGCCAGGACTGGGTGATGGTGTCGCTACTCCCGCCACAGTCTGACGTCACGCTGCCGGGCCCTGCCAGGCTGGAGGGCGAGCCCCAAGGGGACTTCATGCAGGCACCGGGCCTCCCAGGCTCCCCCGCCCCGCAGAACAAGCACGCCGGCTTCAGCTGCTCGTCTTTTGTGCCTGATGGCCCTCCGGAGCGGGAGTCCTCACTGCCCCCCCACAGCCCCAGCATCGCGTCACCAGGCCCTGAGCAAGTCCACTGTCCAGCAGGCCCTGGCCCGGGCCCCTTCCGGCTCTCACCCTCAGACAAGTACCCCGGCTTCAGCTTTGAGGAGGGGCCCGCGAGCGGTCCCGGGCGCTTCCTCAAGGGCAGCCACGTGCCTTTCCACCCATACAAGCGACATTTCCACGAGGATGTCTTCCCCGAGGCCCAGACTGCCCTGGCCCTCGATGGACACTCCTTTAAGACCCCGGGGGCACTGGAAGCCTTTGAGGAGATCCCTGCGGATGTGGGGGAGGCTGAGGCCTTCCTGCCTGGCTTCCCTGCCGAGGTCTGGTGCAACGGGCTCCCCTACCCCAGCCAGGAGCACAGCCCCCAAGTCCTGGGATCAGAAGTCAAGGTCAAGCCCCCAGCTCTGGAGAGTGGTCCGGGGATGTACTGTTACCAGCCCCCCTTGCAGCACATGTACTGTCCTACCCAACCCCCCTTCCACCAGTACTCACCAGGTGGCAGCAGCTACCCTGTACCCTACCTGGGCTCCTCACACTATCCCTACCAGCGGATCGCACCCCAGGCCAGCACCGATGGGCACCAGCCCCTCTTCCCAAAACCCATTTACTCCTACAGCATCCTCATCTTCATGGCCCTTAAGAACAGTAAAACTGGGAGCCTTCCTGTCAGCGAGATCTACAATTTTATGACGGAGCACTTTCCTTACTTCAAGACGGCGCCTGATGGCTGGAAGAATTCTGTCCGCCACAACCTGTCTCTTAACAAGTGCTTCGAGAAGGTAGAGAACAAATCGGGAAGTTCCTCTCGCAAGGGCTGCCTGTGGGCCCTGAATCCAGCCAAGATCGACAAGATGCAGGAGGAGCTGCAGAAGTGGAAGAGGAAAGACCCCATCGCCGTGCGCAAGAGCATGGCCAAGCCAGAGGAGCTGGACAGCCTCATTGGAGACAAGAGGGAGAAGCTGGGCTCCCCACTGCTCGGCTGCCCACCCCCTGGGCTGGCAGGCTCTGGCCCCATCCAGCCCCTGGCACCTCCAGCTGGGCTCTCCCAGCCACTGCACTCAATCCACCCGGCTCCGGGCCCCATTCCTGGCAAGAATCCCCTGCAGGACCTACTTGGGGGGCACGCACCCTCCTGCTACGGGCAGACATACTCGCACCTCTCGCCGGGCCTGGCCCCTCCTGGACCTCCGCAGCCGTTGTTTCCACAGCCAGATGGGCATCTAGAGCTGCGGGCCCAGCCAGGCACCCCCCAGGACTCGCCTCTGCCTGCCCACACCCCACCTAGCCACAGTGCCAAGCTGCTGGCTGAACCTTCCCCAGCCAGGACCATGCATGACACCCTGCTGCCAGACGGAGACCTTGGCACTGACCTGGACGCCATCAACCCCTCTCTCACCGACTTTGACTTCCAGGGAAACCTGTGGGAACAGCTGAAGGATGACAGCTTGGCCCTTGACCCCTTGGTACTGGTGACCTCATCGCCGACATCGTCTTCGGTGCCACCAGCTCCCCCTCCCTGCTATCCCCCTGGGCCCTGTCTGGCCGAGACTGGCAGTGGGACAGGCGACTTGGCACCCCCAGGCAACGGGGGCTCCGGGGCACTGGGTGACCTGCATCTCACCACCCTCTACTCTGCCTTCATGGAGCTGGAGCCCACACCCTCCGCGGCCCCTACTGGCCCCTCTGTGTACCTCAGCCCCAGCTCCAAGCCCATGGCCCTGGCCTGAGCTATGCCCCACAGCAGCTCCAGCCTTTGCTTGGCCCGGAAGTCCCAGCCGGCCGCCCATATCGGGCTCACCTTAAAGGTCAAGGAAGGAAACACACTCCCTGTCCCCTATGTCATGAAGCCAACTTGGTTATTAGCTGGCAGCTGGGGGTGGAGAAGTCACCACCCAGGATACTGCCCCTCGCACATTTCCACCGCCTGGTACACCAGCTCCTGGCCCAGGGACCCCGGAGAGCAAGTGTCTGGGGAAGAAGAAAATGCACTCTCCATGGCTCACACTCATCCACACTTAGGCTCTCGCGTACATGTGCACAGGCACACACACACATACACACACAGTTATGCAGACATACACCCACTCACATACCTTATATCCAGAGGAATCAGAACTATATCACAGACTTCACTGGGGGGCAGCTGAGAGCTGAAGGGTTTGGTTATCAAAAGCTCAGGGCCCCCAGCCAGGTCCAAGACCACCCTGGAACCCTCTTCTGACGTCCACATTCTCTGCAGGCCTGCCCCCCTCCAGGAGTGATCTTTCCCAGAAGCCCCCTGTATTTATTCTCCCATCTTCATCCCAGCAGCCCATCGAGAAGGAGGAGATATGGAACCTCTCCCAAAGTTGTCTGTGGGCCCCCAAGGGGGTGCTGATATTCACAGCACCCACCCTGCCAGGCTCTCAACCTGTCCTCAACTTAAGCTCTATCTGGCTTCCCCTGGGGGAAGACACACAGGAGGGCAAAGTCCGCTCCAGGACCAAACTGAGCCCACTTCCGACACAAAGTGTTTGGAAAAACCCTTGCCCTCGGAAACTTGAAAGTGTCCTTTTGCCCCAGCCCTGGGTGCCGGAATGGCCCCTGCAGGTCACTACAGTCACCCCTGAGAGCTTCATGTAGCTTAGGTCCCAGCTTATGAATACTCCTGTTTCAGACAGCCTGGGCAGTTAGGGAGGGAACTCTGCTTCAGGCTGGTGTGGGAGCACCCATGCCTGCTCTCTTTGACCACTTGGCAGGTCCAGGATGCCCCTGGAGCAAGGGGGTGCCCACCGTGTCCTACCTGAGAGCCCGACCCACACCAAGTAGGCTAAGTGGGAGCTTCAGCCTGCCCGGGGCCTGAGGGTGACAAGAACACCCCCTCCCCCCGAGGTTGGGCCCAGGCTCAGATGAGACACAAGCAGAACCCTTGATGGCCTGCCACTGTTCCCTGTCCTGGAACAATAAAGCAAATGCCTTGTGGTCTCAGCTACCAAGACTTCGTTTCTGGACCTCCCCTCCCTGGAGCAAAAAGGTAGATTCCCTGAGCCTGTGATCTTACCCCAACCCTCACCCAGACCTAGA EMBV3_00442 TCTCTGGAGAAGGACAGTCGTTGCGTAAAAAGGGAAGAAAGCCATAAGCTGGGACTGTTG Gene GeneID:507124|UFD1L:NM_001075300:40_cdna Constitutive 0 NULL GeneID:507124 17 GENE UFD1L MGC142939 ubiquitin fusion degradation 1 like EMBV3_39879 ACGAAGACTCAAGGGCTCCCAACACCAGAGCCTCAGACTGCAAGTAAACGTGGAACATGT Gene BVT0102_186761 + 0 NULL GK000003.2:17178920-17186634 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11856 AACCTTCGGGCGGTCATCCAGGTGTCGCAGATCCGTGTGAATGCAGTCAACCCCACGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33287 ATGCACCTTGTCTTACAAAACATTTACAAGAATTCCTGGCGCGGCTCTTTCTGGACACAG Variant GeneID:535332|METTL6:XM_002685190:75_cdna 739^880 1 EMBV3_28583 GeneID:535332 1 GENE METTL6 MGC134616 methyltransferase like 6 EMBV3_25669 CTGGAAGGAATTCAGAGGATTTTGGCCCCCAACAGTAATTATCAGGATATTGAGACCCTC Gene GeneID:506599|C16H1ORF26:NM_001101873:39_cdna UTR3_Alt 2 NULL GeneID:506599 16 GENE C16H1ORF26 MGC152609 chromosome 1 open reading frame 26 ortholog EMBV3_36952 GCTGGGTAGGTAGGGACCGAGCAGGAAGCTGGTTAGTAAGGTGGCCAGGTTAGCAATAAA Gene GeneID:520080|C16H1orf170:NM_001098048:145_cdna Constitutive 2 NULL GeneID:520080 16 GENE C16H1orf170 C1orf170 MGC155319 chromosome 1 open reading frame 170 ortholog EMBV3_20064 GGCAGTAGCTTATTGTCCTTGTGCCAGTTAATCTCTGCCTAGGGTTGCCAGCCATAGAGA Gene BVV0102_209142 + 0 NULL GK000020.2:26234419-26278614 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114872 1 XLOC_069379 Coding TCONS_00114872 XLOC_069379 Coding Coding PELO 20:26275330-26280607 = TSS85564 4978 1 TCONS_00114872_4 386 0.232422659702692 2 0.0568612585291888 0.000213417336369719 8.59740947123363e-05 0.000114062021639523 0.000142974977404993 2.30666312795128e-05 0.000121481887309723 7.07215928165439e-05 9.28575782217765e-05 6.64778163931378e-05 4.92122610413314e-12 2.00470682205558e-06 8.34769116479956e-06 5.01215897286813e-06 1.37299440650734e-06 1.84773353228855e-05 0.00129883404535671 0.000408003605752268 0.000994380914406575 0.000198612571343308 0.000132601832524084 3.80517814377582e-05 0.000600521810370972 0.000445290492395157 0.000751585393591505 0.000173053034954422 5.39419972354967e-05 0.000161946497704517 0.000128665137129582 4.40391399891412e-05 6.61479153111888e-12 XM_005221522.1 PELO PREDICTED: Bos taurus pelota homolog (Drosophila) (PELO), 0.0 3067 100.00 0.341301727601446 NM_015946.4 PELO Homo sapiens pelota homolog (Drosophila) (PELO), mRNA. 0.0 2228 82.21 0.449377259943752 TCONS_00114872_4 sp|Q58DV0|PELO_BOVIN PELO_BOVIN Protein pelota homolog; 0.0 802 100.00 0.994818652849741 3 coding 0 0 0 0 -0.114138393143244 0.408881193933556 -0.0103950773547926 0.841975643623659 GCTGGGAGGCAGGAGGAGGGCTGCGCATGCGCCCTCGTTGCATCAGCCTTGGTCTGTACAGCAGCAGGAACCGCGGAGAGAAAGGTGTTCGCAGCGGTGCCTCTCGAGCCGATTTTGCGCGGCGCGCCTCGAGACTACGAAAAGGAAGGGCTAGAGTAAGTGCCCCACCCCACGGCCGCTAGAGTCGGATATAACGTGTTTCCTTCTCGCGAGGCAGGTGCCGGGAGGAACCGGGCCCCGCCCCCTTCCCGGCCTAGGATTTCTTTCCCTTCCCGACTCCTTTTTCCGCGGGGACCCCCTCGGTTCCTCTTGTTTTGGCAGTGAGCCCCCGCCAGGGTCATGAAGCTCGTGAGGAAGGACATTGAGAAAGACAATGCGGGCCAGGTGACCCTGGTTCCCGAGGAACCCGAGGACATGTGGCACACCTACAATCTAGTGCAGGTGGGCGACAGCCTGCGCGCTTCCACCATCCGCAAGGTGCAGACCGAGTCCTCCACCGGCAGCGTGGGAAGCAACCGGGTCCGCACGACCCTCACTCTCTGCGTGGAGGCCATCGACTTCGACTCCCAAGCCTGCCAGCTGCGGGTCAAGGGGACCAACATCCAGGAGAATGAATATGTCAAGATGGGGGCTTACCACACCATCGAGCTGGAGCCCAACCGCCAGTTCACCCTGGCCAAAAAACAGTGGGACAGTGTGGTTCTGGAGCGCATCGAGCAAGCCTGTGACCCAGCCTGGAGCGCCGATGTGGCGGCTGTGGTTATGCAGGAAGGCCTCGCCCACATCTGCTTAGTCACTCCCAGCATGACCCTCACTCGGGCCAAGGTGGAAGTGAACATCCCTCGGAAACGGAAAGGCAACTGCTCGCAGCACGACCGGGCCTTGGAGCGGTTCTATGAACAGGTGGTCCAGGCCATCCAGCGCCACATACACTTCGATGTTGTAAAGTGCGTCCTAGTGGCCAGCCCAGGATTTGTGAGGGAGCAGTTCTGCGACTACATGTTTCAACAGGCAGTGAAGACCGACAACAAAGTGCTCCTGGAAAACCGGTCCAAATTCCTTCAGGTACATGCCTCCTCTGGACACAAGTACTCCCTGAAAGAGGCTCTTTGTGACCCTACAGTAGCTAGCCGCCTTTCAGACACGAAAGCCGCTGGGGAAGTAAAGGCCTTGGATGATTTCTATAAAATGTTGCAACACGAACCGGACCGAGCATTTTATGGACTCAAGCAGGTGGAAAAGGCCAATGAGGCCATGGCAATTGACACATTGCTCATCAGCGATGAGCTCTTCCGGCACCAGGATGTAGCCACACGCAGCCGATATGTGCGGCTGGTCGACAGCGTGAAAGAGAACGCAGGCACCGTTAGGATATTCTCTAGTCTTCACGTGTCTGGGGAACAGCTCAGCCAGTTGACTGGAATAGCTGCCATCCTCCGCTTTCCTGTCCCTGAACTCTCTGACCAAGAGAATGATTCCAGTTCTGAAGAAGATGAATGATTGCAACTAACAATTGAGACAACCTGTTTCTCACTCCTTCACTGTTACATTTTCTCAGCATCCTGTGAAGAAAGCTGCAAAAATGGCACTTTGTGGTTCTCACAGGGGTTTTTCATGTATTTTGGTCACTCTAGGTGATTTGTGGTTGGCAGGACATGTTTTCAAACTGAACAATAAAAGGAAATAATCTCCATATATTATTAATTGGGATAATTTTATTTTGGAATTATGAGTTATTCGCAGCTCTTAGAAACATTTTGTATATTTAAAAAGAATGCCTATATATTCTTTGGGATGGAACATAAAAATCCCATACAGCATGCTTTGAAGTAGTTTTCCTTAGGAAAAGCTTTTTAATATCTCATTATCTTCAGTTTACATTGTTTAATTTGGCACGATGTATTCTTACACTTTGTTATATGATCCTTTTTCTTGCCGTTTCCCCCACATTCCAATTTTTCTTAATTTTTAAGTTTATTTGCTATTTTAAATGATTGCTTAGTAATTAGAAGACTTCCCTGAGGCTAAAGTTAAAATCTATTTTTCTTAAGAAACTTGTTAAACCAACCTTGTTAAAAGTAATAAGCTGGGTTTTTCTTGCTAGTTTAGAACAAATTGTATTTACTTTAGAGGAGCACCTAATTAGTTACTTTTAGGTTGTAGAGCTTTGATCTACTAAAGATTCTCAGGATAGTCTACTCAAGGTGCTTTTATTTTTAAAATGAGGCTAAGTATGGGATTTGCTTTATTAAGAGCTAATTAGTGGCAAACCTAGATACAGTGCACAGTCTGTACTTAAGTTCTTTGCTCTCCCACACTATTTATGTATTTGGGAGGTTGTCATAGTTACAGTTAATGCTACCATGAATTTGTATGTACATTTGCATTCTTAATGGAGGGGTGAGAAAGCCTGTTCAGAAAGTTTGTCACATCATTGTGTTTAGTTGCTCAGTCGTGTCCAACTCTGCAACCTCGTGGACTATAGCCCACCACGCTCCTCTCTCCATGGGGTTCTCCAGGCCAGAATACTGGAGTGAGTTGCCATGCCCCCCTCCAGGGATCCTCGCAACCCAGGGATCAAACCCAGGTCTCCCACATTGCAGGCGGATTCTTTACTGTCTGAGCCACCAGGGAAGCCCATCACATCATTAGTAAATGGCAGTTGATTTGTACTCCAGCTGTTTACTATAATTAGGGACTTTATGCAAATACCTGAGAGTTTAAAATATTTTCCATTATTTTTTGTGTGCAATTTAAGAATTGAGGGGGCCTTGCAATATAATCACATCTTAACATTTTTCACATCTCAACTTAGTAAAATAATAGGAAAGGCCTATGAACAAAGAGTGGTAAGTCAGTCAGTCTGTAACTCTGGGGTCAGTGGTGCCTGCTTCAAACAAGGACACTAAGTTAAATTTGCTTGTCCTTTCTGCCTTCTGAGCCTTTCTGCTGGTGCGCCAAGTTCGTATATTGTTTATAAAAAACTTCCTAACTAATCTGGACCTTTTTACCTGTAGTTAGCTGTGGTTGTTGTTCAGTTGCTAAGTAGTGTCCAACTCTTGTGACCCCATAGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTTCCAAGGGAAAAATGCTAGAGTGGGTTGCGTTTTCCTTTTCCAGGAGATCCTCTCAACCCAGGGATCAAACTCAGGTCTCCTGCGTTGGCAGGTGGATTCTTTACCACTGAGCCACAAGAGAAGCCTGTAGTTAGGGATAGACACCTCCATATACTTTAAAAGCACATTTTAAAATATCTACTTCCTAATCAAAGTGATTTAAATTGTCATTTCATTATATAATTTTATGGATATTTATGTTATTAATAATTTGGTAGGAGTGTAAATATTGAAGTCACTAAGATTCTTAATATTAGAACTTTATTGATAATGCATTGTTTTTTCAGTCAGAAATTGGAGATCTGGGGCCTCTTGCTCAGTGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGGCGGAGGAGCCTGGTAGGCTTCAGTACATGGGGTTGCTAAGAGTCGGACATGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGAACCTGGTGGGCTGCCGTCTTTGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGCAGCAGCAGCTCATTATCTATCTAGTACAGGTTAGTCCTAGCTGTTAACCATGGCTATAGAAACCAGGGGAAAGAAAACCTAATAGTAAATCTAACCAATACGTTTTAGAATGTTAAATTCTCAAATTTAGCTTCATCTTAGCTTAATTAAGTGAGTGAAGTCATTCAGTTGTTTCCTACTTTTTATGACCCCATGGGTGTAGTCTGCCAGGCTCCTCCATCTGTGGGATTCTCCAGGCAAGAATACTAAAGTGGGTTGCCATTTCCTTTTCCAGAGGATCTTCCTGACCAGGGATCTTTGCAGGCAGACTCTTTACAATGTGAGCCACCAGGGAAGCCCAGGTGGGCTTGGGAACTCATCTTAGCTTGGAAACTGTAAAAACTCAACACCCAGACTGGACCCCAGACTAAATAACTTTGCAGTCTTAGAAATGATAGACTATTTTTTTAATCATTATTAAAGCTCCCAGGTGATTTCCAATAGATAACAAGGCTGAGACCCTGGATTCAGGCTTTGCTGTTCAAAAGTGTGGTTTCCATGAACCAGCAGCATCTTCTGAGAGCTTGTTAGAAACTAGAATCCAGGAGTCTACCCTAGACCTGTTGAATTGCAGCCTGTATATTAGCATCTCCAGTTGATTGCCATGTGTAATAAAAACTGATAAAACATTTAGGCAGTAGCTTATTGTCCTTGTGCCAGTTAATCTCTGCCTAGGGTTGCCAGCCATAGAGAAAAATATTTGAGTTTTAAGATCTTAAAGGAAAACTAACTACCAATATTCAATTAAATTATAAAACTAAATGAAAGCCTGTTTCTATGTCTAATTAAAGTATCTTTAAGAATTTGTATTTTTTAAAGTTAAATGTTTTACCAGTACCATTATCAAGTATATATCTTCCTAGATACATAGGTGTAAATATCAAAATAGTGATAAGAACATAATAAAATAAATTGGTTCAAATAATTATTTTTTACTGTTCTCTAAAAAACAAAATGAACCATAGGTTTTTGGAAAGCATATACAGCAGTTTAATTCCAATTGCTATTCGTTAATAAGGAATGACTGTGGTAACAAATGAAAACACTGTCAATAACATACCTCAAATTAATGCAGCGTTGTACTATAAGCTTCCGTTCATCCCCAGGTGCTTGTTGGAAACAGATTGCTACCCTTGCTAGGCTCAATAAATGAGAAGTTTGCAGTTTGTTTTCTTTTGTTGCAGGTATGATGCATATCAAATTATATTTTGCTATTCCTG EMBV3_39357 CCAAACCTAAAGAACTTGAAGATCTTGAAGCAATGATCAAAGCTGAAGAAAGCAGTAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42050 TTGAGCTTAAGCCAGTTACTGAAGAGGCACCTGAAACAGAGGCAGCACCTTCTCTTTGGG Gene GeneID:534185|MRPS31:NM_001076015:154_cdna Constitutive 1 NULL GeneID:534185 12 GENE MRPS31 MGC140733 mitochondrial ribosomal protein S31 EMBV3_42709 GGTCTCTCTGTCTCTGGCTCATCTTCAGGTGTGTCCCTAATATCATCGGACCCAACCCTT Gene BVV0101_069854 + 1 EMBV3_04214 GK000020.2:3868636-3892886 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115469 1 XLOC_069639 NonCoding TCONS_00115469 XLOC_069639 NonCoding NonCoding STK10 20:3879336-3880486 i TSS85937 1150 2 TCONS_00115469_1 64 0.175652173913043 1 0 0.000106479369592763 0 5.63287387507063e-05 0.000158862519743982 0 3.11048525563357e-05 0 0 8.91927683504387e-05 0 0 0 0 0 0 0 0 0 0.000187067783183034 0.00035019187625732 0.00317827384623279 0 0 0.000276981064762349 3.61484619781042e-05 0.000343084383995109 0.000127372835546226 0 0 0 XM_590179.5 DENND2A PREDICTED: Bos taurus DENN/MADD domain containing 2A (DENND2A), 5e-18 96.9 100.00 0.0452173913043478 XM_005248399.1 CWC27 PREDICTED: Homo sapiens CWC27 spliceosome-associated protein homolog (S. cerevisiae) (CWC27), transcript variant X1, mRNA. 9e-15 86.0 75.81 0.106086956521739 0 noncoding 0 0 0 0 0.0024560167187177 0.983470371822426 0.0404729586570836 0.492198289706305 GTCTATGGGGTCGCACAGAGTCGGACACAACTGAAGCGACTTAGCAGCAGCAGAGGGAATAGGGAGCTTTGAGAAGGGTAAAGAAAAGATGTGCCAGTGTAGAATGTGCTGGCTGCCCTTGCCTACACGCAGAGCCCTCAGGCAGAGAAGCGCAGCAAGTCAAACAGCTGAGAGCCACGGGTGTGAGTGTCACAGCCTCTCCAACCACAGAACCTTTGCTCCAGTGGGGGTTCCACCCTGTAACAGGAAGTGCCTGCTTAGAAGGGAGGTGGTAACAAAATAGACACGGGGATGGGCCTGGGTGGCCTCAGAATTGCCTCCAGCTGGGTTTCTCAAAACTTAAAGTGCTTAGCGATCACCTGGGGATTTCTTACAACGCAGACCGTACTTGATCAGGTCTAGAGTGGGGCCTCAGACCCTGCATTTCTAATAAGCTCCCAGGTGATACTAATGCCACTCCTTCAGGGACCACAATTTGGTAATTCAGCTCACCACCACTTTCAGGTCAAAAAGAGCAAGTCTTGACCAGGAGGACTGAGAGAAGCCCTATCTGTGGTCCAAGCTCCTAAAAGGGAAGTCCTGGGATCAGAGTGGTCCACAAGCTAAAGGAATCCCATGAAGGTGACGGTGGCTCATGAAGGGGGTGTCCTCCTCGAGAACATGCGGGTTTCTCTAGGAGATAGGGGAAGGGTGGCGTCAAGCCCTAAGTGTTTTTTGGGTCCCCAGCAACACAGAATTTCTTCTCAGGACTAAGAACCAGACAATGCCTACAGCAAACGTGTCTAGAATTAATCAGCTCTGCCCCACCCACCCCTCCACAAAAGCTCTCTGGCCTCCTATTCCTCTAGGGGAAAGGTAACTACAGACTGGGAGACTCCCCAGCAGTGACTCATCCACACGCTCAAATCTGACCCCCGAAGCGCAGGATTCCAGAGGCCTTAACCTCCCGCTCTGCCGGCCCCAGCCTCCATCTCCAAGCCTAACCTCTCACTCCGAAACCCCCTACCCCCACCCCCGGTCTCTCTGTCTCTGGCTCATCTTCAGGTGTGTCCCTAATATCATCGGACCCAACCCTTCCAGACGCAGCCCAGTTGCTCTGTGCCCATCGCCTCGGCACCCTAACAGCATCTGGGTGGACTCCCCTAAAAAG TCONS_00114260 TCONS_00114261 TCONS_00114262 TCONS_00114267 TCONS_00114263 TCONS_00114264 TCONS_00114268 TCONS_00114265 . 3' 333 TCONS_00114260 TCONS_00114261 TCONS_00114262 TCONS_00114267 TCONS_00114263 TCONS_00114264 TCONS_00114268 TCONS_00114265 . 3' 1482 EMBV3_14965 GGGTGAAGTAGGTGAGAAGTTGCCCCTAAACCTGGGTCCAAAAAGACAGTTCTAGCCTTG Gene GeneID:615077|TMEM55B:NM_001076359:91_cdna Constitutive 0 NULL GeneID:615077 10 GENE TMEM55B MGC139957 transmembrane protein 55B EMBV3_40138 CCAAGGTTCAGTAGCGTAAGAACTACTAGATAGCCAAAGGGTTTCAATCAACACTGCAGC Gene BVT0102_291823 + 0 NULL GK000010.2:93571381-93617615 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018481 TCONS_00018482 TCONS_00018480 TCONS_00018479 1 XLOC_009264 Coding TCONS_00018482 XLOC_009264 Coding Coding GTF2A1 10:93614166-93647863 = TSS12427 5142 1 TCONS_00018482_5 337 8 0.847637701804368 0.00206711044725576 0.00196409823865097 0.00159080220799693 0.00178055976164952 0.00210019812573715 0.000905449425782621 0.0026511548503162 0.00268041748252107 0.00411097866260346 0.000862274761551413 0.000437138509521969 0.000280738975830472 0.000534704249941741 0.00114853413976698 0.00113857208607827 0.00221668078628631 0.00089208392688942 0.0016936415383336 0.00189838773347868 0.00251852880796734 0.00120883314905386 0.00131258371393465 0.00156870039971961 0.00125265535200889 0.00300152845116811 0.00190170156971766 0.00184742705364213 0.000383828935555937 9.37964166763604e-05 0.000234397806796925 XM_005212232.1 GTF2A1 PREDICTED: Bos taurus general transcription factor IIA, 1, 19/37kDa (GTF2A1), transcript variant X1, mRNA. 0.0 9274 100.00 0.999805523142746 NM_201595.2 GTF2A1 Homo sapiens general transcription factor IIA, 1, 19/37kDa (GTF2A1), transcript variant 2, mRNA. 0.0 5790 85.16 0.99902761571373 TCONS_00018482_5 sp|P52655|TF2AA_HUMAN TF2AA_HUMAN Transcription initiation factor IIA subunit 1; 0.0 667 99.11 0.997032640949555 1 coding 0 0 0 0 0.18532412056065 0.40235974883031 -0.045496957325361 0.625134090249204 ATGGAACTAAAAACTTTATGGGAGAATAAACTAATGCAGTCTAGAGCGGTAGATGGATTTCATTCAGAAGAGCAGCAGCTTTTATTGCAAGTTCAACAGCAACATCAACCCCAGCAGCAGCAGCATCATCACCATCACCACCATCAGCAAGCTCAGCCTCAGCAGACAGTGCCTCAGCAAGCGCAGGCCCAGCAGGTCCTTATTCCTGCTTCACAGCAAGCTGCAGCACCACAAGTTATTGTTCCTGATTCTAAGCTGATACAACATATGAATGCATCAAACATGAGTGCTGCTGCTACAGCTGCAACCTTGGCACTCCCTGCTGGTGTGACTCCTGTTCAACAGATATTAACAAATTCAGGCCAGCTTCTGCAAGTGGTCAGAGCAGCCAATGGTGCCCAGTATATCTTTCAGCCTCAGCAGTCAGTGGTTCTGCAGCAACAGGTTATACCACAAATGCAGCCTGGTGGAGTACAAGCTCCTGTTATACAGCAGGTCTTGGCCCCTCTTCCTGGAGGGATTTCACCACAAACAGGTGTCATCATCCAGCCCCAGCAAATCTTATTTACAGGAAACAAGACTCAAGTCATACCTACAACAGTGGCAGCACCTACACCAGCACAAGCGCAGATAACTGCCACTGGCCAGCAGCAGCCACAGGCCCAGCCTGCTCAACAGCAGGCTCCGCTGGTGTTGCAAGTTGATGGAACTGGGGATACATCATCTGAAGAAGATGAAGATGAAGAAGAAGACTATGATGATGATGAGGAGGAAGACAAAGAGAAAGATGGAGCTGAAGATGGGCAAGTAGAAGAGGAACCCCTCAATAGTGAAGATGATGTGAGTGATGAGGAAGGACAGGAACTCTTTGATACAGAAAATGTTGTTGTGTGCCAGTATGATAAGATACACAGAAGTAAAAACAAATGGAAATTTCATCTCAAGGATGGCATTATGAATCTTAATGGAAGAGATTATATATTTTCCAAAGCCATTGGAGATGCAGAATGGTGAAAAGAGTTGGTTCATTTTCTTTTATAAATAAAACAAAAGAAACTTAAAAAAAAAATTTAAAGTGGACAGTTTGAAACTTGGGACATATACCAACCAAAACTTAACTTCTGCATGTCAGAAAAGTGCAGTAGAAGCAGAGCTACTGGAACAAAGAGACCTTGACAACACAGACACTACTTCTAACTGGCAAGCCATGGAACTGTAGCACCTGGGGTTGTTGGGGTGGGGAGGGTGGGGATTTGTGTAAGAAAACCAGAGTTGTCGATTTTAAATACAGGTACCTGCCACTGGTGATTAGCATGTAAAGCTTTGTTTATATTCCTTCCTCCAACTTGAGTTCAGCCAGAAGATACTTGTTGGAATGAACTGAAGAAACTTCCCTTTTGATAGATTGAACTGAAACTGCTTATTGTACGTGGTTATATTTGGTAAAAATTGCGTGTTGAGCTTTTTACAAAAGGGTAAGAATTATGGTGTTGAATTTTAATTCACTTGTATAAGGAAACAGTTTAGAACTCTTATAGGTCTTAAATATTTTTACTTGCTGTTCTCCCTCAGTAATATATACCTCTTCCTTCCCTGCTTGATGAAACATCTATTTACAAGTTAAAGGAAGTGTATAATCAGTAATTACATTTTGGAGACAAAATTTACCTAGGCGTGGATGTTTATTTTAATTAGGTTTTCAGACTCATTATAAAGACTTGGGTCTTGTCTGAGTTGAGCAGAATTAAAATGACAACTTCAGTTTCCTAACAGAATTGTATTTGTTTCTTTTAGTCCCACACCTTAAAAAGAAACCCCAAGTGGCTCCTCAGGAATGCAGTTTTGTTGCACACAGGTACCATCTAGCTGGAATTATATACATATGAATAGATAATTTTCCTGTTGGGCTGAAGTGTATGCTTATATATATGTTTAGTCTTTAAGCTAAACAAACATTTAGATAACATTCTGTGCATTGATTGATGCATTGGGCAGGTGGTGAGGACCTGGATTTTTATCAAACAGTTTAGTAATTTTAAAAGTTTCTTGTGTTTACTAGTAAAGAATTTTAAAACTCTTATTCTAATTGAACACATTTTTTAAAATGCAACTTTGTAATTTGAGGAAGAAATTTTTGGGGTTAGAGGAGGGTGGGCCACTAAGTACATACTTACCTCTCTTGCACTGGCCCTTCCAGGCCGCTGATAATACAGACATGGGCTCCAGTTTGCACATCGGGAAGACAGCATAGAAATTTGACTTGTATATTAAAAACAGTAGAAATGTAATATGTATATGAAGAATGCATAGCTTTGTATTCTGTAAGGGGCTCTAAAGAACGATGTGGCAGTGCTCTATGTTCAGTGTGAACGAGTTGCTTGGGAGAATTGCAGGAACACGTGTCCTCACCTTTGTTCTTAACACCTAATTCTTTTCATGGTTTATTTTGACAAAATTCACATGTGTTTAACTTGTATATTGATTTTTTTTTAAGTCTTCCACTTTTGTCTTCCTTTTATTTGCCTTTGTGTTTCCAGAAGTAACAGAGAAACACTTTAAAGTACGTTGCAGAGAAAAACTGTGAGCTGTTTTATATTGTTTTTTTTTGTTTTTTTTGTTTTTTTTAGCACAAATCTTTAAACTTCTTGAAAAGGCTAATTTTTTTTTTTTTCTTTTGCCTACTTCCCTCCCAAAATACCACCTTGGTCCCTTTAACTTATGTTCTGAACTTTGATATAAATGGTGGTTTCTAGCATGCTAGTAGTTAGATTTATTTCGATGCCATATCTGGTGATACGGTTTTAATTTTTACTATATTAGTTTTTTGGAGGTTTATTTGTTTACCCCACTATGCTCAAAGCACACGCAGGTTTTTTGCTTTGTTTTTTTTGAGCCTGGGAGGAGAGAGGAAGGGAGTAAAATCACAGAAGTCCTGTTGTTCGTTTGTCCTTCAGTATAGTTGCTAGTAGGTTTATATTTACCTGGTGAAGAAGTCAGTGACCTGAACTACCTATAAAAGTTTAGCATTGCTGCAGTGTTGATTGAAACCCTTTGGCTATCTAGTAGTTCTTACGCTACTGAACCTTGGATTACTATATGATACTCAGCTTATATTTTGGACTCTATGTAGACAAAAACATTGTATTCATAATAGAATTGTATACTAGCCTGTTTTTATAACATTGAAATATGAACAACCACTGCTTTCAGTGTGACTTAGTAGGGTTGTTTTGAAGCAGGAAATAACCATTTATATTTGCACCTGTGTATATTGCATATCAATTATAACATACTTGGTAAGCGCTTTTCTTTTACCTGTGAAAATTCTGAAAACTGGTCCAAACAACACTGCATACCAAATTGTGCTCTTATATATCACTGCATTGTGTTCCTTTACAGTCAAATAGCATGTTTTAGTTTTATTATAGTGGCTTGCTGTAAGAATGCCACTTGCTTATCTTTTATTGTACTTGAATTGTTAATCATGCTTTTAACATTTTATTTAACATCATTTCATTAGGTTCCATTAAAAATGTCATTCCTTTGAAAATGCAAGGATTCCCACTTTCAAAATTTTGAAGTAAAGATAACGTTTATTCAAAGAAGGAAAATAGTTCAGACTTGGTATTATGAAATAAGTGAAGGTTTCAGAAAAGGATTTGTTTAGATTTGCACAGATGATGATGGCACCTTTTATTAAAAAACAATCAACAGTGCTAAGGAAAATTTACACAAAAGTACTAGGTTTAAGTGTGAAAATGTGTGCCTTTCAGTGTATGTACTCTTTTTTTTTTTTTTTGGTGGTCATTTGGATAATCAGACCATTTGAATGGCTGAGAGCACATTTAAATTCTGTGGAGTGCCACATTTGGCTAAAACAACTCTAATGTGCAATTAGTTTCTGGACTAAAATGTCTGTTATATGAGGGGGATCTTTATATTGGGCTTTTATATTTTTTTAAATGTTCACATTTCTTTCTATTAAATGCCATCATAGCACCACATTTATATTGTTGCCTCTTAAAATCAAAGCCACCTTGATGATGTTCTTTTTGGCATGCATCAAGATTTGAGCAGTGTGTATAGCGATTAAAATGTGTTCTTGAAGAGCATAGTCTAATAGACTCTGGTTTAGACTGCAAGAACATAAAAATAAAAGTATAATAGCTTTTGTATAAAGATTTTCTTTTGCTATATGAAAATCAAGGATTTGGTTTGCTTTTTTTCTGGCTTTTATGGAGGAATGAAAAGTGTTATCTCCTTCTAAGAGTAATTTTTGATTATCTTATAGCAATAATGTCACCATTCTTTTCAGAAATAAATAAACCTTGTATAAGAAATCAGACATAATTTTCTTGGGAGCTCCCTTTATATCTTAGCTTTTTCTTCCTCTTAAGAAAATTCCTGTATTTTCAGATTATTTCATCTTGAACTTTTTGAGCTTTTGTGCAATGTAATATTTTATTGATCCACCTTTGTACATTTTCATTTTATTTCATACATCTATCTATCTCCCACCTATCCGTCTGAATCGGCTGTTTCAGGTTTTTAATTCATTGGTTAAAAAATAGTTGCTTTATATATTTCCTCATGGGTTTATGTTAAATAGTTTTGCATTTTAATCTATTATGCTATGGAAATTATTCTGAAGTTTGTATTCCCTTTTTAAGTCTGCCTTAGTCTATTTTTTGTCATTTTTTATGGTTTAAGGAAGAACACACAGAACTTGAAATTTTTATTTTGAGGAACAAGAAAAATTGTTTTTTTCTTTTAGGAGAAGAACTACACTGAGTTATTAACTACTATTTCAAGTTAAGTTTCCTTAAATCATCCGGTATGCTTCAGGGCTACAATTTGGGGGGAGGAGCTAATTCTTTTTGCTGTTCTGAGCTACTATTGTCAACTGCTGTTGTACATACTGTTATGTGTAAGGGCGTAAATATATTTATTATGTTTGTAAAATTCATTCTGTACAATTGCAGATCAAGGTTGCTCTTCTGTGATATACGGGATATTATGTTTTAAAGACCATCTTGGAATACAATTAGAGAACTTAGTATTTTGATGTACTAAGACCTATTTTAAGTTTAATATTTTACCTTTGCAAAAACTTTAATTAAAGATGTTATTTAAAAAAAGTAA EMBV3_37554 AAATCCCACCCTCCCTGCTAATGATTTCCCAGTGCAGAAGCAGAGAGAAACCTGGAGAGA Gene BVV0102_140098 + 0 NULL GK000007.2:75393343-75522539 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217754 1 XLOC_131570 Coding TCONS_00217754 XLOC_131570 Coding Coding GABRB2 7:75098722-75394459 j TSS162082 6648 1 TCONS_00217754_3 519 0.0111311672683514 12 0.977561067979549 1.67156911739025e-26 1.33217352281695e-45 1.30798772752235e-05 1.49868678545152e-05 0.00030238426206984 8.100256520665e-33 7.59020962820495e-06 4.58880824874688e-31 7.58888811463997e-22 1.93190784234045e-37 3.08533444087465e-23 1.94646887661962e-57 3.57512073913284e-68 1.70882887784344e-22 4.32397790673602e-23 1.75028787618315e-19 4.1502554057303e-15 9.28158823717019e-13 6.82743833290939e-75 1.30131892696335e-05 8.09305317115219e-55 0 3.7751498701392e-19 2.48616657045856e-17 1.64068498043417e-23 1.35279024422682e-43 3.87249602866754e-24 4.42503505773049e-28 1.4165658834501e-33 3.09357934408099e-16 XM_005209699.1 GABRB2 PREDICTED: Bos taurus gamma-aminobutyric acid (GABA) A receptor, beta 2 (GABRB2), transcript variant X1, mRNA. 0.0 1.155e+04 100.00 0.962845968712395 NM_021911.2 GABRB2 Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 2 (GABRB2), transcript variant 1, mRNA. 0.0 6549 82.36 0.960890493381468 TCONS_00217754_3 sp|P47870|GBRB2_HUMAN GBRB2_HUMAN Gamma-aminobutyric acid receptor subunit beta-2; 0.0 1000 95.95 0.998073217726397 2 coding 0 0 0 0 -0.108766560537735 0.582455320673935 -0.00320273213414848 0.965867420275671 ATTATCCCCCCTCCTCCAAATCCCACCCTCCCTGCTAATGATTTCCCAGTGCAGAAGCAGAGAGAAACCTGGAGAGACTGCGCTTTCTACTCCCCTCGCGCCCCCCTCCCGGCCCCCGCCCTTCCTGCTATAAATAATCTGGACTGGCGGGTCAGGCAAGTCACTCGGCCAGAAACCTGGACCCCGAGGTTTTCTTCTCTGGGAATAGGGGGCAAAGGGTGAGGAGGAGGAGGAGACAAATCGCTCGCAACCGCTGCTGCCCCTTTGATGTTTTGGTACACCGTGCGCATGCGCCTCACATTAGAATTACTGCACTGGGCAGACTAAGTTGGATCTCCTCTCTTCAGTGAAACCCTCAACCCATCCAAAACTAAAGGGATGTGGAGAGTCCGGAAAAAGGACTACTTTGGGATTTGGTCATTCCCCTTAATAATCGCCGCCGTCTGTGCGCAAAGTGTCAATGACCCTAGTAATATGTCGCTGGTTAAAGAGAGGGTGGGAAGAATAAGAAAGGGGTTTCATGCACGAAGTTCTGAAAAATCACGTGGCTGGTCCTTTTGGTTTTCAGGTCCCCCTGTGGCAGTGGGAATGAACATTGACATTGCCAGCATCGACATGGTTTCTGAAGTCAACATGGATTATACCTTGACAATGTACTTTCAGCAAGCTTGGAGAGATAAGAGGCTGTCCTATAACGTAATACCTTTAAACTTGACTCTGGACAACAGAGTGGCAGACCAACTCTGGGTGCCTGATACTTACTTCTTGAACGATAAGAAGTCATTTGTGCATGGAGTGACCGTCAAGAACCGTATGATCCGCCTGCATCCAGATGGGACAGTCCTTTATGGCCTCAGAATCACAACCACAGCTGCCTGTATGATGGACCTGAGGCGGTACCCACTGGATGAACAAAACTGCACCTTGGAAATTGAAAGTTATGGATATACAACCGATGACATTGAGTTTTATTGGCGTGGGGATGATAACGCAGTGACAGGAGTAACCAAGATTGAGCTTCCACAATTCTCTATTGTAGATTACAAACTGATCACCAAGAAGGTTGTTTTTTCCACAGGTTCCTATCCCAGGTTATCCCTCAGCTTTAAGCTTAAGAGAAACATTGGTTACTTTATCCTGCAGACATATATGCCATCTATCTTGATCACTATCCTTTCCTGGGTCTCCTTCTGGATTAATTACGATGCTTCTGCTGCAAGAGTGGCATTAGGAATTACAACTGTGCTAACAATGACCACTATCAATACCCACCTCCGGGAGACTCTCCCTAAGATCCCTTATGTGAAGGCCATTGACATGTACCTGATGGGGTGCTTTGTCTTTGTTTTCATGGCCCTTCTGGAATATGCTTTGGTCAACTACATCTTTTTTGGGAGGGGACCTCAACGCCAAAAGAAAGCAGCTGAAAAGGCTGCCAGTGCCAACAATGAGAAGATGCGCCTGGATGTCAACAAGATTTTTTATAAAGATATTAAACAAAATGGGACCCAATATCGATCCCTGTGGGACCCAACTGGAAACCTCTCCCCAACTAGACGGACTACCAATTACGATTTCTCTCTCTATACGATGGACCCCCATGAGAACATCTTACTGAGCACTCTTGAGATAAAAAATGAAATGGCCACCTCCGAGGCTGTGATGGGACTTGGAGACCCAAGGAGCACAATGCTGGCCTATGATGCCTCCAGCATCCAGTATCGGAAAGCCGGGTTGCCCAGGCATAGTTTTGGCCGAAATGCCCTGGAACGGCACGTGGCACAGAAGAAAAGCCGCCTGCGGAGACGCGCCTCCCAGCTGAAAATCACCATTCCCGACTTGACTGATGTGAATGCCATAGATCGGTGGTCCCGCATATTCTTCCCAGTGGTTTTCTCCTTCTTCAACATCGTCTACTGGCTTTATTATGTGAACTAAAACATTGCTTCCCATGGGAAGCAAGGACTAGATTCCTCCTCAAACCAGATGTACAGCCTGACATAGAACTTGGAAAACACATCAATCCAGGACAAAAGTGATGCTAAAATACCTTAGTTGCTGGCCTATCCTGTGGTCCAATTCATACCATTTGGGTTGCTTCTGCTAAGTCATGAAAATGCTAAGGTCCTCGGGGTTTTCCAGTTAAAATGCAAGTGATTTGTACACGTGCTGGCAAGACTGAATCTGTGTTCCACCTTATCTGCTTAGTACACAGCCTATACGGAAGGGAATAATTTAGATGGTATTCCAGAAGGCTCAGTAGTGTCATCAGTCATCTTGCTGAGATGTGGTCATATCCAGATACTCCCCATTTTCATTCCTAAGGTTGTCATGCGGTCTTCCATGCCATGCAAACATCCTTACTGAAGACAATATCTGCCTGTCTTATTGAGGTGATGATGGTGCCATAGGAAGTTAATTCCCACCGGATTCTAGAAGATTCTTATGTAATTCAAACAAGATAGGGAGAGTCAAGACAGAGACTCAGGAAACCAATTTGGCCAGGCCATGTTTGCTTGAGCTTGGGAATCAACACTGACGTCTTCCATTTTGACGTTTAGAGACGGGGAGACTTCTAAACATTATCATGCCTGGTGGCCAAAAGAAATTTTTCTATAATGCTATTTCTGAGGCAGTTAAAAATAAGAGTTAATATCCCGGAACGGAGTGGAAAATTCAGAGACAACGGTTGTAACAAAATTAAAGCACGCAAGCAGCATGACCCTTCACCCATTATAAGCATGTGGTCCACACATTCTGTGTTCAGTGGCAGAAGGTAGAGTGAAAGAGATTTCTTTCCCTCCAAACTCACAAGCTTTTGACAGCATACCTGAAGAAGTTTTTATAGTGTACCTGATCAAAAGACAACCCCTAAACAGAAATGTTAGCAGAATTAGAAGCATCTTAGGTTACACTGGGAGTGATCCCAATATATGAATATAAAGCACAGACAGAGCTAGCAGACAAGATGCTTTTCTCTGACTCTACAACATTTTCCTGCAGTTTATTTCTGAATTTAATAGGGTATTTCAAAAGAAGGATTTGTTCATTTCTTTAGCGGGCTTAATGGTCTTTTCCAACTTTTCTTGTTTCTGAAATTCTGATTATATTCTTAAGAGACAGACAGAGTAAGTCTTTGGAGAGATTTTAAGAGAACTGTATTTCTTTATGTACAATGAAGTTCACCTTTGTCTTTCATGGCAAACAATACTCAAGAGATTATGTGCACAAATAGGTTTAGTTGTTGATTTGGAGAGTTTGATTTTTTTAGGGTGCTTTCGTTGTATATGTTGCAGTCTGCCTAATCAAATAGGAAGTCATGGAAAACAGAAGAACAACAAAGCCATAGTACATGGTGAATGTTATGAGCCTCAGTTGATACTGCAGAAAAATATATAGCTGATAATCAGGCAGGCATGATATATTACTTTTATTCAATTTTTAAATTATGTCATTGTGCTTCTTTCTATACTAATTGGATATATGCATTCATATGTTGGACAAAGAGAAAAGAATAAGCTCAGATATTTTATTTCTATCAATGTGAAGTTCATATTTTGCCTTTCTCAGAGGAAATAGTGAATTCCTCATTTTTCCTTAAAGTTAGATTTGATTGAAACTTTTCTTAGAGGATGACTTTGCTATTTCTATTTAAAAAAACAGCACTTCTTTTTAGAGTAACATCCCTAATTGTGCGTAGCAGCTAAGGCCAGTATCCGCCTGTGGATAAATGTATGTTTTCTTTCCCTGATGATTCAGCAGCTTAGAATATGATGGAGTCCTGCTGCCCTTCTATTCTTCACTGTCAGAGGGAAAAAAAAAAAGTTTAGCATCCTTCTGAAGTTGTCCCCCAGATAGGATTTTTTTTTTTTTTCCACCAGCATAGGGAGCTCTGGCCCTTATATTTTTGTTTATACACCTGAACACCTCTGAGTATGATCTTTGGGCAGAATCCAATCGATGCGTTGCCCATGGGCTCAGAGCAGAGATTCCTCGAGTTTCTCCAGGGACACACTTTCCCCTGGGCAGTCATTTTGAGACATCACACTAATAAAAGTGCCTGCCCCTTGTCACTAGGGGTTAAAGTTTGAGTAGCATATATCAAGAAGGAGCATATTGATAACTCAGGTTCACAACTCCAAAATGCCATTCTGGAAAGGTTTTTCTAGAGACAACTCGGAGCTCCAGCCTAGAAGTGGTTCTTATCTGCAATTACCGTAAAAGCCATAAAAATCCTTGATATTGTTATATGGTTCCAACAAAATTTTGATGTCCAGGAAAGTCAACAGAGAAATCTAGATCAAAGTGGACAGAAGAAGCAACTTAGCTGCATGAGCTTCAAAAGCATATGACCAGGGATTCATTTCTGACTGCAGTGTTAGGAAAAATCTTGGGGAAAGGAAAAAGATGGGACAGTGGAATAGAAACCCTAGAGTAAAATCCATTGATTGGCATTTAGTAACCATATAGGTAGAAAAACCTGACTCATCCCACCCAGAGATAACAGTAGATATAGAATTTATTCTTAAACAATTGTTTGTTTTGTAGTTGAACTGAATTTTAGTTACCAGATTGGGGGAGGGGAAGGGAGGGGAGCTAGATCTTTAAGTCTTTAAAAGAGACCAGTCAGCTTGGCATCCAGGACCACAAAAGTATGTTTTGGCAATTCTGATATAGCATTACTATCAGCTTATACATATATGTATAGTTTTTCTTTTGTTTATGAAGTAGCCAGATAGCCAGCAATTAAGGTGTTTTTCATCTCTGTGAAATTCATAGGTAAATTCTGACTCTAAAAGGCACACTCTCAATGAAATCTTTGATCTCAATCTGTATATATATATACTGTACATGACTGCTAGTAGGTATGAAATGCATTTTCAGAATTGAAAACTCATGCAACATAATCATGTGTTTGCATAAGGAATGTTACAATTCTTTCTACTGCAATTTAATAACAGGGAAAAAGACGTAAGCAGTGCCATCTAGACCTTTCCTTATTTCTTCAAAAGCAGTGCTAAGTGAAAAATAGTAATAATAAAAAATGGTTTAGGAACCAAAAGACTTTGCATTCTAGTATTAGGAACACAAAAAAAATCTGTCAGCTTACAAAAGCACAACGCATAGAGAAAGTTCAGTGGGGATGCATAATGGAGAAATGAATCACGTTTGTTTTAAGCAAGACCTGCATTAAATTGTCTACTAAGACAATTTCCATTTTCTATAGGTAACTGTGTTCCAATTTTATGATTGAATTCATACAAAAACAGCCAACAAACAGGTCTTACCACATATTTACATGTATATATGTGTATATATAGATCCATATAAACATACATACATATATATGCATTCATATGTTGGAAAACAAAAGGAATAAGCTAATATGTTTTATTTCCTTCATTAAACCAATGTATGAATATTTTTAATTTGGCAGCCGACAAATCAACATATTGAAACAAGTAATACAGGGTACTGAGCATTTCTCTATCAGCGAATCAATGCCTACAGTTCTTATGAACCACTGCACAGTTTGACACTCTAATAGTACTGTACCTCAGAACATGGAAATCAACTAGTTCTCACATTGCTTGTCTACTTATTCTCTTTTTCAAGGAAACAACTAGCATTGTTCAATGGTGATTTAAAAGCAAAAATGTCTTAAGAAAACAGAAAATGATAAAAAAAAAATATATATATATATATATTCCTCCCAAGAGGAGGAAAAAAAATAACTAAACCCCACCATGTTGGTTAGGGCAGATACTCTCAACTGTAGCAATCATACCATTTTGCTAAATGTACAGAGTCCATGTAATGTGAGCAACCATAACTTTCACTGAGCGTGTGTAAATATTAAAACAGATTTCTTAAATATTTTTAACTTCTAATTTGTATTTTATGGTAAGGCAATGTGCAAATTCTGTTTATGGCTTAAGTTGCTGTGTTATTATGTAAATAATTAAACATGCTGTAAATGAATAGTCAATAGATACAAATCATTGTTTAGTTTTTTTTCTTTTTTAGTTTTTATTTAATTTTTACTAAGTAAAAATAGTTACTGCAGCCCCAGCAGAGAAATTAAAACACTCTTTTGCATAAATGCTTTGGGATCCCAGACAGAAGGGTTTTAATTCGCTCTCTCTCACACACACACACACACACTTTTTCTTGCCACTCCCACTCATACCCCATCTATGGGAAACACTGTAGTGTTTATAACAACCAAGAGATAGCCTTAGAAATGGCAACTTAGAAATGGGAAAAGCAGAAATGATCATTGATTACTTGATAGATCTTTTTATACATAAGAGTTTAAGAAACCAAAGTTCATAACTTAAATCTCAATTTTCAAAGACTAAAAGTTTATATTGATGGCACTACAGGAAAAACAAATGCTTATTATATACCTGCTCCAGATATATGTTACACAATAGCACATAGAGAAGACTTTTTTTTTTTAATAATAGCATTTGTCGTTAGATAGCATTTTTCCTTTTAACCAAAGACTCCATAATTATTTTAAAAAAAGAAAGAAAAATGGAAAAGTGAGGGAAAATAGGAGAAAAAAAGACACTGCTTCACACCAAAGGTTTAAAAAATATTTTCCAAATATACGAGGGACATTGTAAAAAAAGTAGTAAGGAC EMBV3_25965 GACTTTACCCTGGGCCTCCAGAGAAGGGAGGACTGGAACTTGGCCTTACCAGAAATCAAA Gene BVT0102_184900 - 0 NULL GK000002.2:15949683-16837425 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101667 TCONS_00186757 TCONS_00109145 TCONS_00035588 TCONS_00070837 TCONS_00006825 TCONS_00073009 TCONS_00035587 TCONS_00029637 8 XLOC_061734 XLOC_112809 XLOC_065050 XLOC_020952 XLOC_042614 XLOC_002387 XLOC_044777 XLOC_015896 Coding TCONS_00186757 XLOC_112809 NonCoding NonCoding - 4:32324771-32326538 - TSS139125 1767 3 TCONS_00186757_2 55 0.0967741935483871 1 0 0 0 0 0 2.79410892102778e-07 0 1.65017314241717e-06 0 4.83737988684683e-06 0.000201555322199326 0.00116978448370647 3.26441943836938e-05 0.000152951949092433 0.000804430079656231 0.000228864365398564 0.000576959664756751 9.39573802572616e-05 0.00114781140635001 5.79750538891859e-07 0 0 0.000544424498943754 0.000798857411235649 0.000132826671161526 0 0 1.98951918442323e-06 0.00130248875621743 0.000859188409485259 7.7407247285157e-05 XR_226444.1 LOC101908820 PREDICTED: Bos taurus uncharacterized LOC101908820 (LOC101908820), 2e-176 623 79.23 0.370684776457272 0 noncoding GGGAAGCACACTGATTGAAACCATCCACCCTGGCCAGGCACCATAGTAACCATTTGCATGAGTTGTTTTAGGACAGGAGATCCTGCTAAGGAACACAGAACTAATAAGCCACCACCAACCGGAAGAATTCAGGAGAGGTCAAAAGGAGACACCACATGTCCGACCACCTCCCAGAATCCTTCTCTCTGACATCCATCTTGGCTGAACAAGGCGTGCACCACCGGGAAGGACTCTGAGTCAGAATGATTGGCTAAGGACAATCCGGAAACTAATCCCATCACCATAAAACCTGAGACTGCAAGCCATGTGGCAGAGCAGTTCTCCTGGTTTCCCTTACCCTACTTCTCTCAGCACATGTGTCTCCTTGGACAATTCATTTCCGAGTGTTAGACAAGAGCCCAGTTTCGGGCCCTGGAAGGGGTCCCCCTTCTTGCAACAAATGGTGACTCTGGTGGGACCTCTTCTTCACTGAGACTGACATCCTGACCACTCGGGGTACTCAGGGGCCAGCTTGCCTGCCAATGGACCAGACTCAGTGGCTGCAACTGGGACCCTTTTGTCCCTGGTCTCCTCCTGACGCGGACAACTGGCCAGAGTGTCCCGACCGGTGAGGAACAAGAGACTTTATTGACCTCCCTCCCCTTCCCTCTCTCTTTCTTCTCCTTAACCCTTCCTATCCTTCCCCGTTTTTCTAGTCCTCCGGTCCTGGATGCAGGAATCTGGTTGAAGGGCCTCAGCCTGAGCTGAGGATTGGAGACTGATCACCTCCTCTTGGCAGAGAACTCGAATTCTGGTTCTGTTCTGGTCTGATTTCTGGTAGGGCCGAGTTCCAGTCCTCCCTTCTCTGGAGGCCCAGGGTAAAGTCCTATAACGCCTGGGTATCTGCAGGTGGCAGGAGATGTCTGCAAGGCCACCCCTTTCACCCCCCTCTCCCTCTTCCTTCCCCTTCTTCTTTCAATCTGGCTTCCAATTCCTCCCTTTGAAATGTTTGAAGACCTGAGATATTTTCATTTACTCTGTTAGTACTTGGATCTGAAGTTCTGTGTCTTTATAGGAGGTTTTCTGAGAGACTGTATTCTTGTATTTAAGGGAGTGTCTGATGAGGACTGCCAGGTCTATATGTGTGTTTTAACTCTGTGTTCTGTGTTGTGATTTTTGATGGCCATTTTGTTTTGTCTGGCTACCATTTGGCTTAGACCTGCCACCATTTTGTTAGAACTTGATTTTCTTTCCCTGTGCATTGAGACCAGGGCTTTGACTCTGTTCTCAGGAACACTTATCTAGACCATCTCTAACCCCTGAGACTGAGGAAAAATGGGAAAAAGTCTTTAAAAGTTGTATTTATTCCAACTGTTTTTTATAAACTAGTAAATTTTATATTGTAATATGTAATTCATGGCTAAAAACTTAAAAAATGAAGCTAGATCTTGCACTATCTGTCTAAATATGTCTTGGTATGTCTTTGTCTCTGGGTAGTATTTTTGAGGTTAACTTATAAATGAGCTCTATTTAATTGGCTTAAACAAAGGTAAGCACTTACAAATCAAATAATTCTGAATTAAGCAATAAATTCCAGGTTCATGTGAACTGAGAAATATTCAGTATTAAATACCTGATATTAATGTTTGTTGATCTATCTAATATAGACATGTCTTAGAGTGATTAACATTAAGTAGAATATTTTCATTGTACCTAGGTTTAATATATGTTAAATATTACCATATTTACAAGTTTATCAGTTACAAGTTTGTCAACAAAGACATCACC TCONS_00181192 . 5' 30172 TCONS_00181192 . 5' 30172 EMBV3_32562 GATGCCACATCATCGAGAAGCATGATGGACAGGATGTTTGCCCTTGAGCGTCTTGCTCGT Gene GeneID:540524|ISOC1:NM_001101213:43_cdna Constitutive 0 NULL GeneID:540524 7 GENE ISOC1 NULL isochorismatase domain containing 1 EMBV3_04723 CGTGTTTTATAAATCCTCTCTTGAAGCAGAAGGGTGATTATGAGTGGGTCACAGCAGCTC Gene GeneID:517097|CTCF:NM_001075748:258_cdna Constitutive 0 NULL GeneID:517097 18 GENE CTCF NULL CCCTC-binding factor (zinc finger protein) EMBV3_41066 CCCCGAGTGTGGGTCCCGTCTTAAGGCATGTAGAATAAGCATGGAGTTGTATTGAGGGGA Gene GeneID:510773|PID1:NM_001079584:91_cdna UTR3_Alt 1 NULL GeneID:510773 2 GENE PID1 NULL phosphotyrosine interaction domain containing 1 EMBV3_29965 GACAGAGGCTTCTGGAGGGCTGAAGTTTATGGTGTCACAAAGAGTTGCACATGACTGAGC Gene BVT0102_298229 + 0 NULL GK000027.2:19283328-19976284 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00157566 1 XLOC_096021 NonCoding TCONS_00157566 XLOC_096021 NonCoding NonCoding - 27:19896591-19897419 - TSS117891 828 1 TCONS_00157566_1 46 0.229468599033816 1 0 3.28639501348283e-05 0.000497568191617163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.59816527498637e-05 4.34265129229402e-05 0 0 0 0 0 0 0 0 0 0 XR_138822.2 LOC100847572 PREDICTED: Bos taurus uncharacterized LOC100847572 (LOC100847572), 4e-49 199 83.68 0.228260869565217 0 noncoding 0 0 0 0 -0.751724630294465 0.0523267581972934 0.0050473666903387 0.930159770058671 GGGTGTTAGAATGTTTTTCTTAAATGGACTCACATTTGCTAACTTCAAAATCAACATCTTGAGTTCTCCTTTCGATTCTTGTTAAAAAAAAAATTCAGAGATAATCTTAATCTCATTTAGAGCTGAGTTTTTTCCCACCAGATGGCTTCCCCCAAACCAATCACAAACATAAGAGCTGGTAATGGCATAATGTGTGATAAATCATCTGACGAATTTCCCTTTATCTAGAAGACTGTTCAATCAACTTAGATAAGGACAAATTTAATTATTTCCCAGAAGACTTTAGGGCAAAATTACAATTTCAGAATTTCATTTTAAGCAATACCAAATCCTCATGTTTATATCAGCCAATATTTCAATTTCATCTTAAGAGATTTGTTATTGCAACAATGAGTTTGCTACTATCAAAGGATAATTCTTGGTCAAATATGCAAACATGTTTTATGAATGTCAATATAATGCAAATGAAGCATGAAAAAGGTTTTGCAAATTGCACCAGTAATTCAATGCAATACCATGAATTTGATTAGTCAATGTAGATAGTTCTGAAAACAGAATAACTGAATCTGCCTTTGATAAAATCATTTGGTTGGTTGGATGATTTGTATACTGAACAAAGTATTTTTTGTCTCCCACTGGCTTCCCTAGTGGCTCAGATGGTAAAGAATCCACCTGCAGTGTGGAAGACCTGGGTTCGAACCCTGAGTTAGGAAGATCCACTGAAGGAGAGCATGGCAACCCACTCCAATATTCTTGCATGGAGAATCCTGACAGACAGAGGCTTCTGGAGGGCTGAAGTTTATGGTGTCACAAAGAGTTGCACATGAC TCONS_00155190 TCONS_00155191 . 5' 78866 TCONS_00155190 TCONS_00155191 . 5' 78866 EMBV3_35053 TGACGCGGTTGCTCTGGTGGATGCATTTGATTTTCAGGATGTGACACTGGGCTCTGTGCT Gene GeneID:513996|ACOX1:NM_001035289:398_cdna Constitutive 0 NULL GeneID:513996 19 GENE ACOX1 MGC127142 acyl-Coenzyme A oxidase 1, palmitoyl EMBV3_15510 CCACTCTGCGGTCTTACAGGTAGCCAGCATCCAGACACTTTGGACGATCATCTTGAACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36046 CTGAGCTTTCACCTAAAGATGGACAAAATTTGTATCTTGGTACTGTAAAAAATAGATCTG Gene GeneID:782045|CYSLTR1:NM_001099726:2_cdna Constitutive 1 NULL GeneID:782045 X GENE CYSLTR1 NULL cysteinyl leukotriene receptor 1 EMBV3_21946 AGTACTGTCCAGGCTGTTGCAATATATCTCCCTCCTCCCCTTCTCTGCCTCCTCCCGTCT Gene GeneID:533847|ZNF532:XM_002697837:536_cdna Constitutive 2 NULL GeneID:533847 24 GENE ZNF532 NULL zinc finger protein 532 EMBV3_39160 GGTGGTTTTGGACCAGACAGGCGTGTCTAAGAGCCGTGTGAAGCCAGTGGAATACAGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16793 TAAAGGTGACCCCTGCCAGTTGCCAGCAGCCATAGCACATTCCTGCTCCACACGGATAGA Gene GeneID:513258|PGAP3:NM_001105363:127_cdna Constitutive 1 NULL GeneID:513258 19 GENE PGAP3 PERLD1 post-GPI attachment to proteins 3 EMBV3_09415 CTCTGTGCAAAGACAGGAGTAGAAGCTGATGAGTGGATCAAGATATTACGCTGGAAGTTG Gene GeneID:533156|DAPP1:NM_001076891:14_cdna UTR3_Alt 2 NULL GeneID:533156 6 GENE DAPP1 MGC142363 dual adaptor of phosphotyrosine and 3-phosphoinositides EMBV3_12800 TCATGGCAACTGGAACTGTGTTTCCAAGAGGTTAAATAACGCGCCCAGATGGGGAGGGAG Gene BVT0102_181362 + 0 NULL GK000007.2:55234080-55472446 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213674 TCONS_00213680 TCONS_00213687 1 XLOC_130517 Coding TCONS_00213680 XLOC_130517 NonCoding Coding LOC100847454 7:55300924-55343394 j TSS160023 793 1 TCONS_00213680_1 91 4 0.981421742918364 0.0022514076175289 0.00174670542048177 0.000993884946750202 0.00147243503471812 0.0008805888557131 0.000345408428268458 0.000647655262133171 0.000287579508338212 0.00101261939951772 1.40692635414708e-47 9.35095460121597e-11 2.83572207975916e-05 0.0001553444114811 1.52219878177144e-05 8.55674962282758e-38 0 0 0 4.0524054805926e-05 0.000877941577048914 4.85752803728873e-08 0 0 0 7.00845086026715e-52 4.41760502516238e-42 2.2744679576113e-244 4.05316149610161e-23 0 0 XM_003582448.2 LOC100847454 PREDICTED: Bos taurus uncharacterized LOC100847454 (LOC100847454), 3e-95 352 99.49 0.248423707440101 XR_249875.1 LOC101926961 PREDICTED: Homo sapiens uncharacterized LOC101926961 (LOC101926961), misc_RNA. 9e-07 59.0 74.47 0.117276166456494 0 noncoding 0 0 1 1 0.378293441814271 0.10613065698774 -0.0476602955656731 0.415624670609575 GACCCATTCAGTAGCTCCCAGATTCCATGCGCGAGAGGGGGATGAGTGTCCAGGAGTGATGGCTGTGTGGAATCCGCGTTTTCCAGTCCTGGCCGGTTTTCTGCTCTCGTGAAGCCTTCTTTCTTGGCGGGAAAAGGGGTCCGCAGCCCATAGTGGACGACTGAGGGGATGAGGGTTGGTTCCCTCTTTCACCCAGGTTTAATGGCTGCTCCAGTGACATCTGCATTAATGAGGGGGAAAAGAAAAAGGATCCCTCATTGATGGAGAAAGAGTCCCCCTGGGTAGTGAAAGGGTTAAAAGCACACACCCGTGAAGTGGGGAGACCGTGGCTGGAACCCAGGGAACCCGAGTGTACTGGCCCCCTCTCCACTGCTGACTGCTGTGGCTGTCTCATGAGGAAGGTGTTGGCCACCACTCATGGCAACTGGAACTGTGTTTCCAAGAGGTTAAATAACGCGCCCAGATGGGGAGGGAGCTGGGAATCAAACCTGCATTATTGGACTGCTTTTTCCACCATGTTGAGTTGCAGTTACTGAAATGGACACCAGAAGCGTACAGTTTCTGTTTGGACTCTTCCTGGGAAGGAATGAACAAGTGAAAAACAGCCCTGTAGTCAAATCCACAGAGCCCCCAAAACTTCTATCCTGCATATCTGCCCCTTCTGCCACCCGTGAAGGCCATTCTGCTTATCCCACCCTGGCAAGACTTTAAAGCTGATCCCTCAGCTGAAATGACCAGATGGAGTGAGCAGTATGTTATTATTATTTAATAAAGCTTGTGTTGTTCCCTATTT EMBV3_20072 AGTGGGAAGCCCTCTGGATCAGCAGTTAACATGGGCTCTGTGCAGGGACACTACGTTCAA Gene GeneID:505073|BAT2L1:XM_002691647:365_cdna Constitutive 0 NULL GeneID:505073 11 GENE BAT2L1 BAT2L HLA-B associated transcript 2-like 1 EMBV3_12648 CTCCTGTCCCTTCTGTTGGTGTTTCGTCCCACCCAGCTTTGGGGGTAACTCTGATGTTTT Gene GeneID:540413|SLC35C1:NM_001101210:90_cdna Constitutive 0 NULL GeneID:540413 15 GENE SLC35C1 FUCT1 solute carrier family 35, member C1 EMBV3_16340 AGGCCAAAAACAACCAGTGAGAAGAAGAGAGAAGACCCTCCTCAGCCTCGGGAAGCATCT Gene GeneID:534353|YY1:NM_001098081:268_cdna Constitutive 1 NULL GeneID:534353 21 GENE YY1 MGC148794 YY1 transcription factor EMBV3_23882 ACCTGAATGTGGGCACCATGGCTACACTGCCCGAGAGAAGGATGTTTTGTTCTTCAGGGA Gene GeneID:511799|LEPREL1:NM_001100345:78_cdna Constitutive 0 NULL GeneID:511799 1 GENE LEPREL1 NULL leprecan-like 1 EMBV3_13021 ATGTCATGTTGATGGGCGATTTCAATGCTGACTGCAGCTACGTGACCTCCTCGCAGTGGT Gene GeneID:282217|DNASE1:NM_174534:39_cdna Constitutive 1 NULL GeneID:282217 25 GENE DNASE1 NULL deoxyribonuclease I EMBV3_06758 CCGGGGGCCCGGGCCCCGGCCTGGCGGCAGGGACCAGCGCATCAGCCAGGACGTGGAGCG Variant GeneID:528646|ABCD4:NM_001015636:139_cdna 115^501 4 EMBV3_33224 GeneID:528646 10 GENE ABCD4 NULL ATP-binding cassette, sub-family D (ALD), member 4 EMBV3_41515 TTCTTAAAACACAAGCGGACCGAGGAAGAGGACGAAGAGTCACCAGATGCCCAGACTGCA Gene GeneID:614550|RGS10:NM_001046540:23_cdna Constitutive 0 NULL GeneID:614550 26 GENE RGS10 MGC137274 regulator of G-protein signaling 10 EMBV3_28502 GATAATCTGAAAAGCAAGCTGGATAAAATGTGATAAGAAATTTAAATCCTCCTTCATCAA Variant GeneID:767932|AZI2:NM_001077005:241_cdna 740^839 2 EMBV3_36445 GeneID:767932 22 GENE AZI2 MGC127476 5-azacytidine induced 2 EMBV3_00970 ATGGCATCTCCTCCTTTGCATGAAGTCAGTGTGGGCGGAGAAGGCCGACGTGAAAGAATA Gene BVT0102_237035 + 1 EMBV3_31324 GK000019.2:27500095-27529096 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13304 TTCAATTTCCTGGATGCTCCTGCAGTTCGCGTCACTGGTGCCGATGTGCCTATGCCTTAT Gene GeneID:613610|PDHB:NM_001035435:268_cdna Constitutive 1 NULL GeneID:613610 22 GENE PDHB NULL pyruvate dehydrogenase (lipoamide) beta EMBV3_11535 GTGCTTTGCAAGAAAGGATCTGCGCCGACCGCACCCAATGGCTGTACTGGTGATGCCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35283 GTTCTGGCCCTAACCCCAAAATAGTTCTTACTCCTCCTGTAGTAGCCTTCTCACCTGCAG Gene BVT0102_062557 + 1 EMBV3_01875 GK000022.2:60494235-60502718 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21479 ACGAGACATTTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGC Gene BVT0101_016301 + 0 NULL GK000002.2:37150520-37167344 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102230 TCONS_00102235 TCONS_00102224 TCONS_00102229 TCONS_00102237 TCONS_00102234 TCONS_00102226 TCONS_00102217 TCONS_00102232 TCONS_00102221 TCONS_00102227 TCONS_00102236 TCONS_00102220 TCONS_00102231 TCONS_00102233 TCONS_00102225 1 XLOC_061831 Coding TCONS_00102236 XLOC_061831 Coding Coding BAZ2B 2:36951449-37151789 j TSS76188 8044 1 TCONS_00102236_11 2165 36 0.960027752958735 0.00014314449133883 3.48221076555361e-23 2.02361136435958e-08 2.35416983447401e-05 6.74518659721678e-11 6.39739613017351e-29 8.9753024045757e-08 3.73683200294716e-09 0.000347705971798408 7.93808883688145e-05 1.61711474855871e-06 1.92154344133928e-05 6.00713105900251e-19 6.29296706012853e-36 4.66470557917205e-51 4.51810837802858e-09 6.72831310277626e-51 1.29342272052238e-13 3.31030022371017e-09 1.34064647172545e-06 2.76680382377502e-05 4.07071678287451e-35 1.65779536807357e-24 9.21747785694064e-23 0.000209603151590117 0.000110813521936391 8.7113959133438e-09 5.79924952213825e-14 2.21008714115329e-22 4.67804093035464e-10 XM_005202458.1 BAZ2B PREDICTED: Bos taurus bromodomain adjacent to zinc finger domain, 2B (BAZ2B), transcript variant X3, mRNA. 0.0 1.443e+04 99.52 0.999875683739433 NM_013450.2 BAZ2B Homo sapiens bromodomain adjacent to zinc finger domain, 2B (BAZ2B), mRNA. 0.0 1.213e+04 94.40 0.971780208851318 TCONS_00102236_11 sp|Q9UIF8|BAZ2B_HUMAN BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B; 0.0 3773 92.17 0.999538106235566 0 coding 1 1 1 1 -0.0245291845828553 0.863453531163246 -0.0129056237130039 0.808066229598237 GTTTCAACAAATAAAGCATTGTAAATGCTTGCTTGGATTATGTTTTCATGATAGCTTTAGATAAAAGACATATGGTGACCTTTGGGGTCAGCAAAGCTAGGACACAATAGTAGGTATTCTTTCATGCCTTTTAACTGAAAAATATCACGGCTTGTTGTTTTGGAGTGCTGTCACTGCTCTGAATCGAAAGGATAATGGCTACTTCCTGATTAAATCCACTCTCCACAACATGGAGTCTGGAGAACGGTTACCATCCTCTACAGCCTCCTCTGCTACACCGACTTCATCCTCGATCCCTTCTGTGGCTTCATCAGTTTCAAAAGGCGGCCTTTCCACGGGAGCTGCTTCACTTAGCTCTACAATCAACCCATGTGGACATTTATTCAGAGCAGCTGGGGATCAACCGTTTAACCTGTCCACAGTGTCGAGTGCCTTCCCAATGGTCAGCCACCCAGTCTTTGGTCTACATTCAGCCAGCTCAGGGCATTCAGAATTTGGTGGTTTGGGGACACTTGGTACACCCACAGCCTTAGCCGCCCATCCCCAACTAGCGTCTTTTCCAGAATGGTGGCGAACAACAGATGTTCATACACGTGCAGGGGCAGCCTTCTTTCCACCATTACTGGGAATTCCACCACTGTTTGCTCCTCCAGCCCAGAATCATGATTCTTCTTCATTCCATTCAAGGACTTCTGGAAAAAGTAATCGAAATGGTCCTGAAAAAGGTGTAAATGGATCAATAAATGGAAACAGTACATCATCTGTATCTGGTATCAACACATCTGTACTGTCCACTACTGCTTCAAGTTCTGTGGGACAAACGAAAAGTGTAAGCTCAGGTGGAGGAAATAGAAAATGTAATCAGGAACAAAACAAAACCCAGCCTTTGGATGCTAGAGCTGACAAAATCAAAGATAAGAAGCCAAGGAAAAAAGCTATGGAAAGTTCTAGCAACAGTGATAGTGATTCAGGCACATCATCAGACACGTCAAGTGAAGGCATTAGTAGTAGTGATTCGGATGACCTAGAGGAAGATGAAGAAGAAGATCAAAGTATTGAAGAAAGTGAAGATGATGATTCTGATTCAGAGACTGAAGCACAGCAGAAAAGTAACAACCAGGTGCTATTACATGGTGTTTCAGACCCAAAAGCAGAAGGACAGAAAGCAACTGAAAAAGCCCAGGAAAAAAGAATTCACCAGCCATTACCTCTTCTGTCTGAATCCCAGACTCACTCATCATTCCAATCCCAGCAGAAGCAGCCTCAGGTTTTGTCACAGCAGCTTCCATTTATTTTCCAAAGCTCTCAGGCAAAGGAGGAATCTGTGAACAAACACACAAGTGTAATACAGTCTACGGGATTGGTGTCCAATGTGAAACCTTTATCTTTGGTAAATCAAGCCAAAAAGGAAACTTACATGAAACTCATAGTTCCTTCTCCTGATGTACTTAAAGCAGGGAATAAAAATACCTCTGAAGAATCTAGTTCTTTGACCAGTGAATTGCGTTCCAAACGGGAACAATATAAACAGACATTCCCAGCTCAGTTAAAGAAACAGGAGTCATCTAAGAGCCTGAAGAAGGTTATTGCAGCTTTGTCAAATCCAAAACCAACCTCTAGTTCACCAGCACATCCAAAACAGACATTAGAAAACAGCAACCCTAATCCATTCTTGACAAATGCACTTTTAGGTAATCACCAACCAAATGGAGTTATTCAAAGTGTCATTCAAGAAGCTCCTCTGGCACTTACTACCAAAACTAAAATGCAGAGTAAGATTAATGAGAACATTGCTACTGCAAGTAGCACCCCTTTTTCCTCACCCGTAAATCTGAGTACAAGTGGAAGAAGAACCCCTGGCAGTCAGACAACTGTCATACCCTCTCCCTCTCCCATACTGCATAGTCAAGGGAAGGAAAAAGCAGTTAGCAACAATGTAAACACAGTGAAAACACAGCCTCACTCTCATCCTGCACAATCTCTAGTGGAGCAGTTTAGAGGAACAGATTCAGACATTCTTAGTAGCAAAGATTCTGAAGACTCCAATGAGGATGAAGAGGAAGATGATGAGGAAGATGAGGAAGATGAGGAAGACGATGACTCTGATGACAGCCAATCAGAATCAGATAGTAATTCAGAATCAGATACAGAAGGATCAGAAGAAGATGATGATGATGATAAAGACCAAGATGAATCAGATAGTGATACTGAAGGAGAGAAAACTTCAATGAAACTGAATAAAACAGCTTCCTCTGTCAAAAGCCCTTCCATCAGTCTCACAGCTCACTCAACACCTCGTAACCTCCACATAGCAAAAGCCCCAGGCTCTGCTCCTGCTGCCTTATGTTCTGAATCCCAGTCACCTGCTTTTCTTGGCACACCTTCTTCCACACTTACTTCAAGTCCACACTCTGGCACTTCCAAAAGGAGAAGAGTAACAGATGAACGTGAACTGCATATTCCTTTGGAATATGGCTGGCAGAGAGAGACAAGAATAAGAAACTTTGGAGGGCGCCTTCAAGGAGAAGTAGCATATTATGCTCCATGTGGAAAGAAACTTAGGCAGTACCCTGAAGTAATAAAGTATCTCAGCAGAAATGGAATAATGGATATCTCAAGGGACAATTTCAGCTTCAGTGCAAAAATAAGAGTGGGTGACTTCTATGAAGCCAGAGATGGACCGCAGGGAATGCAGTGGTGTCTTTTGAAAGAAGAGGATGTCATTCCCCGTATCAGGGCAATGGAAGGTCGTAGAGGAAGACCACCAAATCCAGATAGACAGCGAGCAAGAGAGGAATCCAGGATAAGACGTCGGAAAGGTCGGCCTCCAAATGTTGGCAGCACTGAATTTCTAGATAACACAGATGCCAAATTGCTAAGAAAACTGCAAGCTCAGGAAATAGCCAGGCAAGCAGCACAAATAAAGCTTTTGAGAAAACTGCAAAAGCAGGAACAGGCTCGGGTTGCCAAAGAAGCTAAAAAACAACAAGCAATAATTGCTGCTGAGGAGAAGCGAAAGCAAAAAGAACAGATAAAGATTATGAAACAACAGGAAAAAATTAAGAGAATACAACAAATCAGAATGGAAAAAGAGCTTCGAGCCCAGCAAATTCTAGAGGCAAAAAAGAAAAAGAAGGAAGAAGCAGCAAATGCCAAATTATTGGAGGCCGAGAAACGAATAAAGGAAAAAGAAATGAGAAGACAGCAAGCTGTTCTTCTAAAGCATCAGGAACGAGAGAGAAGGCGACAACATATGATGCTTATGAAAGCTATGGAAGCTCGTAAAAAGGCAGAAGAAAAAGAACGATTGAAGCAAGAAAAACGTGATGAGAAAAGATTAAATAAAGAACGTAAACTAGAGCAACGAAGATTAGAATTAGAAATGGCAAAGGAACTAAAGAAGCCTAATGAAGACATGTGCTTAGCAGACCAAAAGCCTTTGCCAGAGTTGCCTCGTATTCCAGGACTTGTTCTCTCTGGAAGTACATTTTCAGACTGTCTCATGGTGGTGCAGTTCTTACGAAACTTTGGTAAAGTTTTGGGCTTTGATGTGAATATTGATGTTCCAAACCTGAGTGTTCTTCAAGAGGGATTGCTAAATATAGGGGACAGCATGGGTGAAGTACAAGACTTGCTTGTGAGGCTCCTCTCAGCTGCTGTATGTGATCCAGGTCTAATTACAGGATACAAGGCCAAAACAGCTCTTGGAGAACATTTGCTGAATGTTGGTGTGAATCGAGACAATGTTTCCGAGATTTTGCAGATTTTTATGGAAGCACACTGTGGACAGACTGAACTTACTGAAAGCCTGAAGACTAAAGCTTTTCAGGCTCACACTCCAGCACAGAAAGCCTCAGTTCTGGCTTTCCTGATCAATGAACTGGCATGCAGCAAGAGTGTGGTGAGTGAAATCGACAAGAACATTGATTATATGTCAAACTTAAGGAGAGATAAATGGGTGGTAGAAGGTAAACTCCGCAAGCTCAGAATCATTCACGCTAAGAAAACAGGCAAAAGAGACACTTCAGGTGGCATTGATCTTGGAGAAGAACAGCATCCACTGGGTACACCCACTCCAGGACGCAAAAGGAGAAGGAAGGGCGGAGACAGTGACTATGATGATGATGATGACGATGATAGTGATGACCAAGCTGATGAAGATGATGAAGATGAAGAAGATAAAGAAGACAAAAAAGGAAAGAAGACTGAGATCTGTGAAGATGAGGATGAAGGTGACCAAGCAGCAAGTGTGGAAGAGCTAGAAAAACAGATTGAAAAACTGAGTAAACAACAGAGTCAGTACAGAAGGAAGCTCTTTGACGCTTCTCACTCTTTACGTTCGATGATGTTTGGCCAGGATCGTTACAGACGCCGGTACTGGATTCTTCCCCAGTGTGGGGGGATTTTTGTAGAAGGCATGGAGAGTGGTGAAGGACTAGAAGAAATTGCAAAAGAAAGAGAAAAACTAAAAAAGGCAAAAAGTATCCAAATCAAAGAAGAAATATTTGAGACTTCTGAGCACACTTTAAATTGTTCAAATCCAGATCACTGTGAGCAAAAGGAAGATACTAAAGAAAAAGATAACCCAAATCTGTTTCTTCAGAAACCTGGCTCTTTTTCAAAATTAAGCAAGCTTTTAGAAGTAGCTAAGATGCCTGCTGAGTCAGATGTAATGACCCCCAAACCAAATAGTAGTGCAAATGGGTGCACATTGTCATATCAAAACAGTGGAAAACAGTCACTGGGCAGCATTCAATCAACAGCAACACAAAGCAACACGGAAAAGACAGACTCTAATAATCTGTTCAGTACCAGTTCAAGTGGTCCAGGGAAGTTCTATAGTCCTCTCCCCAATGACCAGTTGTTAAAGACATTGACTGAAAAGAATAGACAGTGGTTTAGCCTTTTGCCAAGGACACCTTGTGATGACACCTCTCTTACCCATGCCAGTATGTCAACTGCTTCTTCAGTGACCCCTCAGTCTCAGCCACTGTCTAAGTCACCTTCACCCGCCCCAGCTCCTCTTCTTGGATCGTCTGCTCAGAATCCTGTTGGCCTAAATCCATTTGCTTTATCGCCTCTTCAGGTGAAAAGTGGAGTGTCTGTGATGGGACTCCAGTTTTGTGGGTGGCCTGCTGGCGTGCTTACTTCCAATATTCCATTTACATCACCTTTACCTAATCTGGGATCAGGGTTGGGATTGTCAGAAGGAAATAGTAATACATTCGTGACTCCTAATGTTGCACCAAGTAAAAGTGAATCTCCAGTACCACAGAATGAAAAAGTCTCTTCAACTCAACCTGCAGCTGTTGAAGTAGCAAAACCAGTAGATTTTCCTAGTCCAAAACCCATTCCAGAAGAAATGCAGTTTGGTTGGTGGAGAATTATTGACCCAGAGGACCTAAAAGCTTTGCTCAAAGTGCTCCATCTCAGAGGAATAAGAGAAAAGGCATTACAAAAGCAAATTCAGAAACACTTGGATTATATTACTCAAGCTTGCATTAAGAATAAGGATGTTGCCATTATTGAATTAAATGAAAATGAAGAAAACCAGGTAACTCGAGACATTGTGGAGAACTGGTCAATAGAAGAACAAGCAATGGAAATGGATTTGAATATTCTTCAACAGGTAGAAGATCTAGAAAGGAGAGTTGCATCAGCAAGTTTGCAAGTGAAGGGTTGGATGTGTCCAGAACCTGCATCAGAAAGGGAGGACTTGGTATATTTTGAACATAAGTCATTTTCTAAATTGTGCAAGGAGCATGATGGAGAATTTACTGGCGAAGAAGAAGGCAGTGCACATGCACTGGAACGGAAGAGTGACAACCCCCTAGATATAGCTGTAACCAGGCTGGCTGATTTGGAGCGGAACATTGAAAGAAGAATTGAAGAGGATATTGCTCCAGGGCTCAGGGTATGGAGAAGGGCATTATCAGAAGCTCGCAGTGCTGCACAGGTAGCTCTGTGCATTCAGCAGTTACAGAAATCAATAGCATGGGAAAAATCAATTATGAAAGTTTACTGCCAGATATGTCGAAAGGGAGATAATGAAGAACTGCTCCTCCTTTGTGATGGCTGTGACAAAGGCTGTCATACATACTGCCACAGACCCAAGATTACAACTATACCAGATGGGGATTGGTTTTGTCCAGCTTGCATTGCTAAGGCAAGTGGTCAAACCCTAAAAATCAAAAAACTTCATGTCAAAGGAAAAAAGAGCGAGTCAAAAAAAGGCAAGAAAGTGACTTTAACAGGGGATACTGAAGATGAAGACTCTGCATCAACGAGCAGTTCGCTGAAAAGAGGGGTCAAAGACCTGAAAAAAAGAAAAATGGAGGAAAACAGTTCTATTAACATATCGAAGCAAGAAAGTTTCACTTCTGTTAAGAAACCTAAAAGAGATGACTCCAAGGACCTAGCTCTTTGCAGTATGATCCTTACTGAAATGGAAACTCATGAGGATGCATGGCCTTTTCTACTTCCTGTAAACTTGAAACTTGTTCCTGGTTATAAGAAAGTTATTAAGAAGCCTATGGATTTTTCCACAATTAGAGAGAAATTAAGTAGTGGACAGTACCCAAACCTTGAAACTTTTGCTCTAGATGTCAGGCTTGTTTTTGACAACTGTGAAACATTTAATGAAGATGATTCTGATATAGGCAGAGCTGGCCACAGTATGAGAAAGTATTTTGAAAAAAAGTGGACAGATACTTTCAAAGTGAGCTGAAGTTATAATAATCTTTTCTTTTTTTCCCTTTTAAATAAGGATGAATGAGACCAGCAATGTGAACTGTATTTACACACATGTGCAAGGCACATACATAATGACTTTTTTTCCCTTAAGTATCACAAAAAAAAAAGTATCAGAAGAATGATACCGTTTTTAAAGGCTTCACTCCTACAACAACCAAGGCCCTTGGTTATGGGTTTGTGTGATTTATCAGCTAATTTAGGTAGAACAGGGAAGCACACCCAAAGAATTTTCAAAGGAAAGGGTGTTATAGTGCAATAGCAATTAAAATATATCAAATCGCACTGAATATTCAACACCAGAGCTCTAACATGGGAAATGGTTCTTTCCCTCTCAATAAATATCTATTTTTCATTTTTTTACTTTGTAGTTTATTTTTTAGTGAATGTATTTAATTTTATGAATTATTTATGATTAAACCACATCCAGAATCTTCGTTTTCTGTGAAAAGGAAGAACTAGAAAAATTGCTTTAAATCTTGAAAATACAACAAGGAATGTTTTAAAATATAAAACAAAGCCAAGTTAAACTGTTTACACTGATGTGCTATAAAAGCACCAAAAATAAACTTTACTGTAGAGTTACAAGTACATTTATATATATATACATATATATATATATATGTTGCTGCATCACTTGTGTAGTTAAATTGTATTTCAAAACAGTGAAGAAAAATTGACATGTATATACTGTTCATTATTGTTTATATTAAGTCTTGTTTTAAATATGTATTATGTGTATATATTGTTTGCAGACATTATTGTTTATGCCTTAGAAGGATTGTAGCATTTTATTTTAGTCTGAAGGTAATTATAGCTATACAGCTTGTACAGTAATTATCCTCTACCAACACTGTGGCGTCTCCTTGATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATTAGTTTTCCATTTTTTCTATTTTGTTATATAATTTTAAGCCACCAGGGCCTAAATTAAAGTATAATCATTTGTATCCATGTGGAATAAAATTGTGACAATTTCCTACACACACAGTATTTTTTCATAGAAACATTTCCCTCCCATTTGCCTTGCCTCAGAAATAAATTTACAAGACATTTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGAATTTTTTTGTACCTATGTAAGAGTACTTGAAGTTTTATTTAAAATAAAATGTTGTGGAAAAGGTAGCATTCTTTTTTTTAGGAGTGTTATTTTTCACTACTATGTGTGGCACGGATACAATAAAAACTTTTACAAACTAGTT EMBV3_30783 AAGCACAGATACTCTGTGAATTCCCACCTCCTTTCAAATAAAGTTCATGCATGCATACTG Gene GeneID:767936|P2RY14:NM_001077009:65_cdna Constitutive 0 NULL GeneID:767936 1 GENE P2RY14 MGC129078 purinergic receptor P2Y, G-protein coupled, 14 EMBV3_00115 CTCCGCAGGCGACCTCTGTTCCAGACGGATAGTGCCAGTGGTTTATTGATTCCGAAACTA Gene GeneID:281768|FGFR1:NM_001110207:26_cdna Constitutive 1 NULL GeneID:281768 27 GENE FGFR1 MGC151817 fibroblast growth factor receptor 1 EMBV3_42676 GTTGGGGGTCGGTGGTGAGCAAGCAGAGACTACATAGGTTGCCTTGTATCCCACTTCTGA Gene GeneID:100313447|MIR2478:NR_030930:2_cdna Constitutive 0 NULL GeneID:100313447 9 GENE MIR2478 bta-mir-2478 microRNA mir-2478 EMBV3_39024 GAATAGTAGAGAGAGTTCCCATTACCTTCACCAGACGATCTACCCGAGCCAGGCATTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29437 GGAGGAAGCTCCCAGGTGACCCCTCTTGCTTGTCCCCCGTGATTTATAAAGGAGTTTTAA Gene GeneID:618893|MAPK8IP2:XM_002688007:156_cdna Constitutive 0 NULL GeneID:618893 5 GENE MAPK8IP2 NULL mitogen-activated protein kinase 8 interacting protein 2 EMBV3_38107 GTGGTCTCCTCTGAACCTCAGTGGTAGCTGTAATCTACTGGTTTTCACAGTGTCTGGCAC Gene GeneID:526460|TSPAN13:NM_001035362:35_cdna UTR3_Alt 3 NULL GeneID:526460 4 GENE TSPAN13 MGC128160 tetraspanin 13 EMBV3_32772 GCCGGCCGAGCAGAGGGCCGCGGACACCAGGAGGAATGCAGTGGACGCTTTTCGGGTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15555 CCAAAGAGGAATCAGAATAGGGGTAAACAACTCTCCTTCAAACCCCAACCCTGCTGCTGG Gene BVT0102_174543 + 0 NULL GK000010.2:73096807-73129111 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41219 ACCAGTACCCTGCCAGCTCCTCCCTTTATTGCTCCCATTACAAACCCAAGCTCTGGCTAT Gene GeneID:507461|SIAE:NM_001045968:11_cdna Constitutive 1 NULL GeneID:507461 29 GENE SIAE MGC137441 sialic acid acetylesterase EMBV3_13439 GTTGACGAGAACCCCTGCCTCCCGCCTAAGAAATCGTGAAGGACACAGACTTTTCGGTTA Gene BVT0102_134076 + 0 NULL GK000005.2:107934879-107937355 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193236 TCONS_00193233 TCONS_00193234 TCONS_00193232 TCONS_00193237 1 XLOC_117425 Coding TCONS_00193237 XLOC_117425 Coding Coding B4GALNT3 5:107917666-107936882 j TSS144466 5252 1 TCONS_00193237_6 712 0.0314166031987814 18 0.727608639084049 1.2512177301999e-25 1.3181673766406e-21 8.36897544707551e-17 1.97004263313643e-23 4.86085732269922e-17 2.24820081313233e-06 5.39037905255533e-15 3.87697224326305e-09 1.14050437440749e-05 2.99286014554359e-22 2.02270462219875e-41 5.71611387933281e-09 3.28363741373391e-23 4.0591622634179e-13 4.07556688992797e-44 0.00160451107319479 5.23835709829576e-116 0.0011153372494936 1.21437667315017e-35 8.10639575674185e-12 2.0560550784499e-22 3.49605804840265e-18 1.77883482982786e-28 4.28648786608466e-36 1.10885260812211e-32 2.21485305279779e-27 5.97459719511394e-12 1.49011928762011e-08 2.31577088814115e-24 5.84266103048522e-17 NM_001206695.1 B4GALNT3 Bos taurus beta-1,4-N-acetyl-galactosaminyl transferase 3 (B4GALNT3), mRNA. 0.0 5579 100.00 0.588728103579589 NM_173593.3 B4GALNT3 Homo sapiens beta-1,4-N-acetyl-galactosaminyl transferase 3 (B4GALNT3), mRNA. 0.0 2834 83.81 0.505331302361005 TCONS_00193237_6 sp|Q6L9W6|B4GN3_HUMAN B4GN3_HUMAN Beta-1,4-N-acetylgalactosaminyltransferase 3; 0.0 1108 77.98 0.997191011235955 2 coding 1 1 1 1 -0.0460795216030529 0.729160998027645 0.0465659250084627 0.326066922121377 TGAGGCCAGTCCCCGGATCTGTCTTTAGAAAGACACTTCTGCAGGCAGTGTGAGGAAATCCGTGGTGGGAGACGCCTCCATCCTGTTGGGAGGCTCTGTGAGGCCAGCGAGGCCTGGCAGAGGCCCTGTCGTGGTGCAAGGCCGTGGACGTTCCCAGTTCCGCGGCCGTGTCAACCTGCACGTGTTTGAGGACTGGTGTGGCAGCTCCGTCCAGCAGCTGCGGAGGAACCTCCACTTCCCCCTGTACCCCCACATCCGCACAACCCTAAGGAAGCTGGCTGTGTCTCCCAAGTGGACCAACTACGGCCTCCGCATCTTCGGCTACCTGCACCCCTTCACGGACGGGGAGATCCAGTTTGCCATCGCTGCCGACGACAACGCAGAATTCTGGCTGAGCCGGGATGACCAGGTCTCCGGCCTGCGGCTGCTGGCCAGCGTGGGCAAGACTGGAAAAGAGTGGACTGCCCCTGGAGAGTTCGCAAAATTCCGGAGTCAGATTTCGAAGCCAGTCAGCCTGGCAGCTGCCCGCCGGTACTACTTCGAGGTGCTGCACAAGCAGAACGACCAGGGCACCGACCACGTGGAAGTCGCGTGGCGGCGGAATGACCCCGGGGCCAAGTTCAGCATTATCGACTCTGCTTCCCTGTCCCTCTTCACAAATGAGACCCTCCTGAGGATGGACGAGGTGGACCACATCCCGCAGACAGCAGCCAGCCACGTGCGCTCCCCAGACCCCCTTCCCACTGACGAACAACCACCCGTCGACATGCTGCGGCCCGACCCTCGGGACGCTCTCTACAGAGTGCCTCTGATCCCCAAGGCTCAGCTCCGCCATGTCCTGCCTGACTGCCCCTACAAGCCCAGCTACCTGGTGGACGGGCTCCCTCTGCAGCGCTACCAGGGACTCCGGTTTATTCACCTGTCCTTTGTTTACCCTAATGACTACACCCGCCTGAGCCACATGGAGACCCAGAATAAGTGCTTCTACCAGGAAAATGCCTACTACCAAGACAGGCTCAGCTTTCAAGACTACATCAAGATTGACCAGCCTCAGAAGCAGGGCCCAGAGCAGCCAGGTTTCGAGGACGGCCTTCTAGAAGAATCCCAGTATGGAGAAGCGGCAGAGGACACCCCTGCCCCTGATGGCCAGAATGCCAGGATGCCAGTGGGGAAGTCAGGCCCCCCCACAGCCCCCAGGAAGGACGCCCCTGACCGCCGCCTCCGAAACCTGCGGAGACTCCTGGCTCGGGCCCAGGAGGGCCTGGCAGCGCCCCCTCCCTGGCAGAACTCCACAGCCTCCCTCCCCGTGAGGCCCAGCACCACCCCTGCCCAGCCAGCAGACAAGAAGGCAAGGAAGCCCAGCCTCAAGCCCCACCAAGCTCCACAGCATCCTGACAAGTGGCCCCCGGGGCCCCTGGCTGGGCACTCACCACCAGCAAAGAGGCCCAGGCCCGCTGGTGCCAGTCCCGGGAAGATGCTCGGGCGGTCCCAGTGGCTGAACCAGGTCGAGTCGTACATCGCAGAGCAGAGAAGGGGCGATAGGATGGAGCCTCCAGACCCCAGGAGGGGCTGGCCCGAGGACCAGGATGTGGTGGTGGCAGGAGCTGGCCAAGAAGGACAAACGGAGGGTGAGGCCGAGGGAGAGGATGAGGGGGAGGACGAGGAGGATGTGAGCGAGGTGCTGGAGTATCTGTCTATGTTCGACCCCGTGGTGAACTGGGAGCAGACCTTCAGCGCCCACGATCTGGACTTCCAAGCGCTGCGGACGGACTGGATCGACCTGAGCTGTAACACGTCGGGCAACCTGCTGCTTCCGGAGCAGGAGGCGCTCGAGGTCACGCGGGTCTTCCTGAAGAAGCTCAACCAGAGGATCCGGGGGAGGTACCAGCTTCAGCGCATCGTGAATATAGAGAAGCGGCAGGACCACCTCCGTGGGGGCCGCTACCTCCTGGAGCTCGAGCTGCTGGAGCAAGGCCAGCGCCTGGTGCGGCTCTCGGAGTTCGTGTCCACGCGCGGCTGGCAGGGCGCTGATGCCGTGGGCGGGAAGGAGGCCGAGGCCCTGAACCTGCAGGGCCTGGTGTGGAGCCCGCATGACTTCCAGAGGCACGGCCCGGGTGCCCGGGCCCCGGAGCCCAAGCTGTGCTGGCCCCAGGGCTTCTCCTGGAACCACCGCGCCGTGGTCCACTTCATCGTGCCGGTGAAGAACCAGGCACGCTGGGTGCAGCAATTCATCAGAGACATGGAGACCCTGTCCCAGGTCACCAGTGACCCGCACTTCAACATCATCATCACTGACTATAGCAGCGAGGACATGGACATCGAGACGGCCCTGAAACAGTCCAAGCTGCGGAGCTACCAGTACATGAAGCTAAGTGGAAATTTTGAACGCTCGGCTGGACTCCAGGCTGGTGTGGATCTGGTGAAGGACCCGCACAGCATCATCTTCCTCTGCGACCTCCACATCCACTTCCCAGCTGGCATCATCGACACCATCCGGAAGCACTGCGTGGAGGGCAAGATGGCTTTCGCCCCCATGGTCATGAGGCTGCACTGCGGGGCCACCCCCCAGTGGCCTGAGGGCTACTGGGAGGTGAACGGATTCGGGCTGCTAGGCATCTACAAGTCAGACCTGGACAGGATCGGCGGCATGAACACCAAGGAGTTCCGAGACCGCTGGGGCGGAGAGGACTGGGAGCTGCTGGACAGGATCCTCCAAGCTGGCCTGGAAGTGGAGCGTCTCTCCCTCCGAAACTTCTTCCATTACTTCCATTCCAAGCGGGGCATGTGGAACCGCCGCCAGATGAAGACGCCTTAACCCCGGCATTGGGGGGCACCTGCTGGACCGATGGCTTCTGGCACCTGGACCACAGTGGCCCGGCCAGTGCCCGCTCACTGCCGGAGCGGAAAGGGAGGGGAGCAGGGGCCGTGGTGGGCCCAAGCAGCCTCCGAGTCGGTACCCCCTGCCCCAGCAGCCGTCCTCCACCTCTGGGCCTCTGGGGCCAGGAGACGAGACAGAGATGGCAGAGTTCTCAGGAAGGGCAGCGGGACCAGGTCAAGGGAGGCAAGCCCAGCCTGGCCACACCACACTGATGGGAGGTGCCTTCCAGTGCCCACCCGGGGCTCCTAGCGGGGCAGTGACCATGGACTGGAAGCTTTTCTATTGGATGAATTTTACTGGGGTTTTACTTTTTTTTTTTAACAGAAAACCAAAACCACACATGTCCAGACCCAGCATAGACTGTGAGGGGGTGGAGTTGTACATTTATAGGAAGGGCACTCCCTCCCTGCATACCTCAGACCCACGGGTACGTCCCTGGGCCCTGGACCGGGCAACTGGGGAGCTGGCCCCACGTGGAGCCATTAGTAGCTGCCCCGTGGGTCCTTGCCTCTGGGACACATACACCTTCCAGGTAGCCGACCGACAGCTGGCCGCCGATCAGGGCATTAACCTCACCCTCCAGCCGCACTGTCTCCAGACTGACTGGAAGCACAGAGTGGACCAACTCCTCCCAGTGCCTCAGGGGGTTGGGGGCCAGGGAACCTACTGGGGTGGTGGGCTCCTGGCTCCCCGGTGCAGGGCGGACGTGCATCACAGGCGAGGGAGGGTGGGGGGATGGCAGGGAGAGAAGACCCCTTCTGTCCCAGCCACCTGTGAGCTGGGCCTTGGGGACCACATGAAGCAGCGCGGGGAGAGGGGGAGGGGAGGGGTGAGGTCCAAGGGGAGGGATGAAAGGGAAGCGGGAAGCCTGAGTCCTCACAGCCCAGCCCCCTCCTGCCGCCCCGCAGGGAGGAAGAGGAGAAAGACCCTCTGAACTGGGGAACGGGGCCCCAGGGGGGAAGGTCTGGGGAGGTGAGGCGAGGATGTCGTTCTGTCCACAGAGCGGGAGCAGGACTGAAAAGTGAAGCCGTTTCAGGGAGCACAGCCCTCCGCCTCTGGGGCCTGGGGCACCCTTTCTGTCACCTAGATCGCATCACACACTTCTCTTGCACTAATGGTCCCAGGCGCCTCTAGACTGGGGATGTTTCTACTGCTGCTGCCTTCTGCACTGCTCTAACTCACCACCGCTGCCCTGGACATGCGGCCTCGCAAACCTCAGCATTTGCGAGGAAGGGCCCAGAGCAGGTGCGGCGGGGCCCGGGAGGCCAGTCCGCTGGGCCAGGCTCGGTGTCGTGATGGAGTCCAGGTCTCGGTGTGTGGAACTGCAGGGTCTGCCCGGTGGGCCCCGCGGTCAGCCAGAGCACAAATTTGGCCTGCAGGAGAATGGAGCCTGGCGAGAACCTTCTGGAGGTTGACGAGAACCCCTGCCTCCCGCCTAAGAAATCGTGAAGGACACAGACTTTTCGGTTAATAGATTGTGGCTTGTGGATGCTCGATCTGCCCTCAGGCTATGGCCTTTTATGGTCCTGGCTCACATGCTGTGCCTTCGGGGAAGGACTGTAGGGAGTAGATGAGAGCCGCAGCTGCCTGGGCGGCCAGGTTTCTTTCTGGGGCTACTTTTATCCCTGGGCGTTGCCCAGCAAGGCCTGAGTCCACCCAGATGGTCCTCCTGCTTCACTCCTCCTGAGGACAGACGTCTGCCCAGCCTCCCCTCCCCGGCCTGCCACCCCCCTGCCCCAGCCAGTGCCTTGCATTCTGCGTTTGTTACCTCCACACCGTCTGCCTTAATGGAGGGGGCCTGGCACGGCCCCTACTCGGTAGGGAAATGTGTAGGGTACGGGGAGGGAAAGCGTTAAATACAGCAAAGTCTCAGAAAACAAAGTGCCCTCGTGTTTTCCTATTGCCCATCAGGGTGGGAGAGGGCTGGGCAGAGGGCCCAGGCTCACGTGGCCATCTCTAAGCTCTGAGGCCTCCAGTGGACATGCCAGGGACTCTCCGTATCGCCCTTCATCACCTGTATGTGTGTGTGTGTGGTGGGGGGGCAGGCAGCCTTCCCTGCGGTGTGGTTTACTCAGGAGGGGGACCACGAGGTTCCTGTCTGAGGAATATTTCCTGTGCAGTAGATTCATGCAGGTTGGAGCTTTCAGTTGAGAAAGGCTGATGGACACAGGAAGGTCGGGTGAGGAGCTGAGGTGTGGCTTATTCTAAGAGAGTGGACAATCGAAAAGCATCTGTGTTTAAGCTGGGCATGCCCTGTTGATGCGTTACAGTACAAAGGTACCATCCTGGTCATATCTGATCTAGGCAGAGATTGAAATTAGTTTGTATTCCTTAAGCACATGCCCAAGAGAGGGTGCTTCTGTGAAAGCTGCGG EMBV3_01932 CAGGAGAGTAAACCTAGCCCCTGTCACTTCATTATGGCTAGAAGCTGAAGTCTCATCCTG Gene BVV0101_009079 + 1 EMBV3_24489 GK000023.2:15437408-15465649 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01073 GGACTCTTAAAGCGTTGTCTGTGGTGAGCAACAACATAGAGGGAAAAGGACTTGTTGCAC Gene GeneID:512714|LRRC34:XM_002684932:90_cdna UTR3_Alt 4 NULL GeneID:512714 1 GENE LRRC34 NULL leucine rich repeat containing 34 EMBV3_42288 CAAAAAAGAGAGCTTGCTATCCAAATATCCAAAGATGGGCTACCAGGCAGAGTGCCACTG Gene GeneID:535951|ITGA1:XM_002696339:43_cdna Constitutive 0 NULL GeneID:535951 20 GENE ITGA1 NULL integrin, alpha 1 EMBV3_29694 CCTCATGACTTGTGAGATGTTAAACCGAAGGAACGGCAGCCTGAGAATTGCCCTCAGTGA Gene GeneID:281749|EDNRA:NM_174308:56_cdna UTR3_Alt 2 NULL GeneID:281749 17 GENE EDNRA NULL endothelin receptor type A EMBV3_11051 GGTCACATTGAGCGTCCAGCAACTTCAGGGGCATCTTTAGGAGTCAGCACTATGGCAGAA Gene GeneID:614114|LOC614114:XM_002697101:222_cdna Constitutive 1 NULL GeneID:614114 22 GENE LOC614114 NULL similar to cytochrome c oxidase subunit VIb EMBV3_43163 CATGGAAAATACATGGCCTGCTGCCTGTTGTACCGTGGTGACGTGGTTCCCAAAGATGTC Gene GeneID:782966|TUBA3D:XM_002684678:41_cdna Constitutive 0 NULL GeneID:782966 1 GENE TUBA3D NULL similar to mCG18413 EMBV3_41025 CTCATCTTCACTGTGTTCCACATCATTGCCATGTGCTCCACCTTTGCCAATCCCCTTCTC Gene GeneID:281943|NPY2R:NM_174401:2_cdna Constitutive 0 NULL GeneID:281943 17 GENE NPY2R NULL neuropeptide Y receptor Y2 EMBV3_36761 CGACGCCTCCATCACCATGTGCCCCTCCTGCTTCCAGATGTTCCACTCGGAGGACTACGA Gene GeneID:536731|IFT122:XM_002697103:228_cdna Constitutive 0 NULL GeneID:536731 22 GENE IFT122 NULL intraflagellar transport 122 homolog (Chlamydomonas) EMBV3_21026 TGTCCCGAGAAGAGCAAGCAAAGTATTATGAGCTGGCCCGGAAGGAGCGACAGCTTCACA Gene GeneID:540481|TCF7L2:NM_001143739:72_cdna Constitutive 1 NULL GeneID:540481 26 GENE TCF7L2 TCFL2 transcription factor 7-like 2 (T-cell specific, HMG-box) EMBV3_12781 GTTTGAGGAGCTGCTGCGCCTCAGAGCCAAAATTCTCAGAAAATCGACCGATTAGATGGT Variant GeneID:511528|GLRX3:NM_001035101:30_cdna 94^277 2 EMBV3_25697 GeneID:511528 26 GENE GLRX3 TXNL2 glutaredoxin 3 EMBV3_13619 GTCCGCATTGGGGCCCACACCCCTTAATCCAGAGAAAGCTGGTGGAAATTGACTTTTCAT Gene BVV0102_027416 + 0 NULL GK000007.2:21926376-21937771 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216042 TCONS_00216041 TCONS_00216039 TCONS_00216040 1 XLOC_131158 Coding TCONS_00216040 XLOC_131158 Coding Coding GNA11 7:21935671-21949101 j TSS161227 3313 1 TCONS_00216040_1 316 7 0.753816367562737 0.00647935903093256 0.00227483376022303 0.00342765559353683 0.0023948736686259 0.00395891162643488 0.00113926755206779 0.00254034878765113 0.00294171694326198 0.00634602200163571 0.00080498004828639 0.000341587177020608 0.000406019573617615 0.000784554751266702 0.00111007377978117 0.000838012399795263 0.00649238205475755 0.00111464190665109 0.00396460937194828 0.0024803442580878 0.00364309972673339 0.00160278424152349 2.00692983389202e-07 0.000973249750826045 0.00248518034840619 0.00665199092425039 0.00612707510867689 0.00244593262505769 0.000525868711574951 0.000215662194780147 0.000309062238336248 NM_174322.3 G protein Bos taurus guanine nucleotide binding protein (G protein), alpha 11 0.0 2082 99.91 0.348928463628132 NM_002067.3 G protein Homo sapiens guanine nucleotide binding protein (G protein), alpha 0.0 1368 91.98 0.285843646242077 TCONS_00216040_1 sp|P38409|GNA11_BOVIN GNA11_BOVIN Guanine nucleotide-binding protein subunit alpha-11; 0.0 657 100.00 0.990506329113924 2 coding 1 1 1 1 -0.857124525443484 0.157121551582061 -1.06537140887529 0.00127661835984224 GACCTTGATCAGGCCCAGAGCTGGAAGGTCAGAGCCCTCACGGAGGCCGAGGAGGGGGAAGTTTGAATGGGAGGCACGGGCGAGAGCGGGAAGAGCACGTTCATCAAGCAGATGCGCATCATCCACGGGGCGGGCTACTCAGAGGAGGACAAGCGGGGCTTCACCAAACTGGTGTACCAGAACATCTTCACCGCCATGCAGGCCATGATCCGCGCCATGGAAACGCTGAAGATCCTCTACAAGTACGAGCAGAACAAGGCCAACGCACTCCTGATCCGGGAGGTGGATGTGGAAAAGGTGACGACCTTCGAGCACCGGTACGTGAGCGCCATCAAGACCCTGTGGAACGACCCCGGCATCCAGGAGTGCTATGACCGCCGGCGCGAGTACCAGCTCTCGGACTCCGCCAAGTACTACCTGACGGACGTGGACCGCATTGCCACCTCAGGCTACCTGCCCACCCAGCAGGACGTGCTGCGGGTGCGCGTGCCCACCACGGGCATCATCGAATACCCCTTCGACCTGGAGAACATCATCTTCAGGATGGTGGATGTGGGGGGCCAGAGGTCCGAGCGGAGGAAGTGGATTCACTGCTTTGAGAACGTGACGTCCATCATGTTCCTTGTGGCCCTTAGTGAGTACGACCAAGTGCTGGTGGAATCGGACAACGAGAACCGCATGGAGGAGAGCAAGGCGCTGTTCCGGACCATCGTCACCTACCCCTGGTTCCAGAACTCATCCGTCATCCTCTTCCTCAACAAGAAGGACCTGCTGGAGGACAAGATCCTCCACTCCCACCTGGTGGACTACTTCCCGGAGTTCGACGGCCCCCAGCGGGACGCGCAGGCTGCCCGGGAGTTCATCCTGAAGATGTTCGTGGACCTAAACCCCGACAGCGACAAGATCATCTACTCGCACTTCACCTGCGCCACCGACACAGAGAACATCCGTTTCGTCTTCGCTGCTGTCAAGGACACCATCCTGCAGCTCAACCTGAAGGAGTACAACCTGGTGTGACCGGGACTCCCGCCAGCCGCCTGCCGGTCGCCAGTCGCCCCACGAGTCGGGGTTTCATATTTTTAAACAAATGGTTTTTATTTCACAGTTATCAGGGGACGTACACCTCTCTTCCTACACACCTCGTGCACCTTCTCGTCTTTGTCAGTGGCAGAGGCCGCCTTTTTCTGGCCTTGACTTGTGGCTTGCTTTTTTCTAAAAAAAAAAAAAAACACAAAAAAAACAGAAAAAAAAAAAGAACCCACAGCAGACAGGCAGAGAGGAGACCGGGCACCAGCGGTGCCGGGTCACAGGACACGGCCGGTTTCCCCTTGATCTCGGAGCCGCGGAGACGCAGTGGCTGGGCTTCTCTTTCTTCCCGTGTTAAGTTATTGACACCCTCACCACAGTCGCCCTGTTTCTGCGCCGGACTCCAAGAAGTGGGGGTGGGTGGCGCCCCCCGCTGCCCGCCCTGGGAAGTGCCTAACCATTTTTTTTTCTTTCTTTTTTTTTTTTGAAGAAACAAAACTGCAGCCCAGGGCCTCTGGCCGTCCTGCCTTTGGTGGGAGCCCGGGGTGGGAGCCCAGGTGCGTTGGGTTCTCTGGTCAGGGTGGGGGTGGGGGGCTTCCAGCACCTGTGCTCCCCCTGGGAGCACTCCTGGGCTCCAGTGCCAATCCCAACACCGAGGGGCCCACAGGGACCCAGAGTCGCTCTTTATTTTGTTGTATTTTGTGGCCATTTCGGAAACAGTGGGGGTGCGGTGGGGACTTTTTCAGAATCTTCTCAGGTCTGTCCCCGGGAAGCAGAGAGAGAGGGAGGGTCGCCCTGGCAGGTCCATGGCCATCAGGGCGGTGCCCACTGCCCTGTGCATTGCCCAGAACCAAGACCTTGGGCTCGTGGCAGCCGGAGGTGGGCCCTCGGCCTGGTCACAGCCACGGCCATGGCCAGGCACAGAGGCGCCTCCCAGAGGGCCTGAGGGTCGGTTTCTGGGGAAAGGCATGGACCAGGGGCTGCGGTGGTTGGTTTTGTGTGCTTGACTTCTTGCACCAAGGTGCGGAGAGTGGCCCACTGGTGGGGCTCGCACCTGCCCAGCACACCTGAGCCCTAAACCTGAGCACTTGGGCGGCCCTGGATCCCTGCAGAGGAATGAATGATGGGAGAAAGCAAACCAGCTCTGCCCAGCCGGGTCCCGGTCCAGCCCCACCGTGGCAGCCCACCCCCACCCCACCCCTGCACTCCTGATAGGCGGGGCCCGGGGTGGGGTGGGGGTACACTTCCTGGCCTGTTCTACCCTGGTGTCTTCACCGGAAGGGCCCTCTTTTGTGCCATGTGTCCACGTGTGGGGTTTGTACCCTAACCCTGATGTGTACCGAGGGGTGGGGTGGGGGTGGGGGACAGGTGGTGCCGCTGGCTGTGGGCTCCCGCGGTCCCACATCACACAGGGAACTGGATTGGGCTCTTGAGGGGGAGGCGGGGTGGGCGACGTGCACCCAGAGTATTAACTTCCCGAGAGGTCAGCGTGCCAATATCCCAGGGCAGGCCTGGCCCCGCAGTGCCAAACCTCCCCATCCGGCCCACTGGCACCCCACCAACTTGGCCCCACCTCCGCGCCGGGAGAATGGGGTGGCAGGTTTCAGGCCCTCCTCGCCCCCAGTATGAACTTCACCTCTGCGGCGCATCCTTGAGTGCCAGCCCCCACCCCCATGTCACATCACCCAGCAGAACTGCCCTCCGAGTGCCAACGCCCCAGTGGCGTGAGGAGCCCTGCAGCCGGCGGGGGCAACTTCACCTGCTTGTATATTAAACAATCCTGATTTCAGACAATTTAAATCTTAATCTATTTAAAAAAGAATATTATATAAAGATGCTGTTTTTAAACCTTTTGTCATTTGAGATGCATGTATCTTCCGTGCGGGCTGAGGGGCGGGTGGTCAGCTCAGTGCCGGCCTCTGGGGGCTGCTGGAGCCGCCCATGTTCAGGCAGTGCGTCCGCATTGGGGCCCACACCCCTTAATCCAGAGAAAGCTGGTGGAAATTGACTTTTCATACCTTTCTCCTGAAATGAATTCTGTTTTAAATTGGAATAAATTTTGTTCCTAAACACGTGGCCCCCCTCTGGCTTATTTTCTGTTGCTGGCTGGGGGCGGGGTGCGGGGAGGTACAGCAGAGGAACCCTGAGGCCCCCAGGGTGTCACTGGATTCCCATGCGGCTGGGAGGGGTCTTGTCACCTTCAGGTTGGGGTCTCAGCTCGGGAACCACAGCCCGGCTGCCTGGGGTGTGCCTCCTTCCCTGGGCCCAGCTGGCCATTCACTGTCAC EMBV3_20949 GAAGAGTGGTGCTTCGGGTCAGAAGGCGGAGTAGTAACATGATGATTCCTTCTCTTCTGG Variant GeneID:282101|TRPC2:NM_174477:128_cdna 183^271 1 EMBV3_37807 GeneID:282101 15 GENE TRPC2 NULL transient receptor potential channel 2 EMBV3_10253 TTACGGTATTGAGAAGTTTCCACAACAGAGTGAGACCAAGACAGGAGGGAAGGGGACAGG Gene BVT0102_164108 + 1 EMBV3_35679 GK000018.2:52293314-52303107 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10733 ATAATCCCCGGAACATTGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCA Gene GeneID:784484|DENND5A:XM_002693106:499_cdna UTR3_Alt 2 NULL GeneID:784484 15 GENE DENND5A RAB6IP1 DENN/MADD domain containing 5A EMBV3_40784 GGTGAATATGCATGAAAAAGCACTTTCTTCTCTGGTTAATAGTCTGCCCAGGCAGGGAAG Gene BVV0101_010144 - 1 EMBV3_36265 GK000010.2:81624745-81675808 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014973 TCONS_00014971 1 XLOC_008398 Coding TCONS_00014973 XLOC_008398 Coding Coding PLEKHD1 10:81623559-81626684 j TSS10682 2670 2 TCONS_00014973_5 111 0.0764044943820225 3 0.14628681177977 0.00123981572556548 0.000960015109299379 0.000825715581694578 0.00130828918884347 0.000847666058062738 0.000409954298598056 0.000363096320874983 0.00043988479483148 0.000620073482018252 0.000126363027605565 4.45833947215743e-05 8.03518204353393e-06 2.29988549419044e-09 0.000223748246869754 0.00014265958565476 0.00073135608433913 0.000465045447309213 0.00185736243079698 0.00181214243813297 0.000690802417235 0.000534357941826381 0.000221791037579654 0.000606129899725478 0.000237466935659912 0.00109045010388986 0.000842404968611116 0.000607179720322494 0.000214185926477554 0.000149091633957285 9.00699622033039e-06 XM_005211919.1 PLEKHD1 PREDICTED: Bos taurus pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 (PLEKHD1), transcript variant 0.0 4042 100.00 0.838951310861423 NM_001161498.1 PLEKHD1 Homo sapiens pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 (PLEKHD1), mRNA. 1e-138 499 88.00 0.146816479400749 TCONS_00014973_1 sp|A6NEE1|PLHD1_HUMAN PLHD1_HUMAN Pleckstrin homology domain-containing family D member 1; 2e-58 190 96.70 0.989010989010989 0 coding 0 0 0 0 -0.121774368314304 0.382234847975933 0.0244373130426675 0.621288381535591 CGCCCCGCCTTCGGGCGTGCTCTTGGCGTGGCTGCCTTTGGCTCTTGGATCTGGGGCGGGGGGTTCTTTGAAGAGTGTATCCGGAATGCGGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCGGTGTACATCCACAAGGCGGCCACTCGCCGCATCAAGAGCTGCCGCTTCCACCGGCGCAGGTCCAGCACCTCCTGGAACGACGTGAAGCCGTCCCAGTCCTTTATGACCTCCCAGCTGGAAGCCAACAATATGGAGGAGCTGAAGGAGGTAGCCAAGCGGCTCAGCAGGGACCAGCGCTTCCGAGAGTCCATCTACCACATCATGGCCACGCAGCCTGGAGCCCCCTCTGCGCTTCCCCGGGGGGGAAAGTGATGGGCACCCCTCCCCTGGCCCCCCAAGGCCTTCCTCACTGGGGGCAGAGGCGTGGCAGGGGGAGGCCTAACTCCACCCAGTTCCTCTCTGCCAGTGCTCCACCTGGGGGTGGGCAGCCTCACCCTCAGAGGACAGGAGTGCCACCCCGTCCCCCTCACCCCAGATCCTACCCTTGCGTCCAGGCCAGGCCTGTGCAGGCTCAAGCTGGGTGCTGCCTGGTAAAGTGAAGGAGGGGCCTGATTGTGTGGAGAGACTTTTCTGACTAGGGGAATGGGGTGGGCAGGGCCCACGACCCTCTGTCAAGCGCCCTGTACCTCTCTGTGACTCTGCCACCCTCCTTGACCCTGGCTTCCCCAGGGTTTCCCAGCCCTCCTTTGGCTTTTGAAACCCTCTGTCAAGGCCCCTTCTGTCAACCACACTATGGGGGAGAGAAGAAAGGGGCCCGATGCGCTTCTGGGCTGGCGGCCCGCCACAGTCCCCATGGGCCCCTTTCCTGGGGGGCCCTGGCTGTGGGGCTGCTCGCTCACTCCCCTCCTCAGGTGAGCTCCCCCACCTGCAGCCTCAGCACCCTCGAGGAAGACTTGACTACTCCCCCACCCCCAAATCCCTCGCATATGTGTCCTGAGGGCCCTGGGCCGGAGCTGCGGCCAACAGCCATGCTGAAGTCTACCCCAGAGGACAGGAAGCAAGTCAGGGAGTGGAGGAAGGCAGCCGGGCTCCTGCAACATCCACTCCCAGTCAGGCGGGGAGGCGGCTCCCTTGGCCGCCGTGGTCCAGCTGGTCAGTGGGGTCCCGGAGGTCTCCCTCTCAGCTGCCCCCACTCGGATCACCTTGCCTCCTCCCTGCAGAAGCTTTACCCCATGCAACTGCCACTGCGAGCCCTGGAAGATGGGGTTTGGGCCTGTAAGAAGGCTTGCAGCCATTGGTTGGCCCAGTGTCATCAGGGGTGAAGCTGGAACATCCGTCTGCAGCTTTTGTGGGAGACACTGCCCTCCAGGGGGGCGCTGAGAAGTGCGTGTCCCTCATTCATGGACAGACCGTCTGCCCGGCATCCTCTCTGGCAGGGCCTTTTGTCCCAAACTGCCTGAGTCTGTTAGCCTCTCCCCAAAAGGAGTCCCCATGGGTCAGGGTGCTCAGGGATGCTGGTGGTATTGAAGGTGCTGATCCTCTGATGTTCGGAAAATGGAGCCGTTGGAGAGGTGGACAAATGGCTGCAGGGCAGGGGCCTGTGGCCTGCTTTGTGGGGAAAGGAATGTTACTGACTCAAAACACGGGCGTGTCTACTGCTAGGCCAGCCAAGGCCAGGAGGGCTGCCCTGCTCTGCGGTCAGGGCTGCCGGAGAAACGAACCTTAATGGTCCCTTCTCCGTGGTAGGCGGGCTTCAACCAGTCTCTTCCAAGCCTAGGTGCAAGAGGTGCAAGAGTTTCAGAGTCAACGCATCTGAAAGGCCTGAGTCTCCATGTAAAGCTTTAAACATGTAGGAACCTGCATAAACCTGGAACCCATTGATCCATCACGTATGCGAGATGGACTTTGAAATGAGGACGATTTATCAACCGAGATTACTATTTTATTCTTTGTTTTTAAAGACTCCAAATTAATAATGGTTTGCTCTTGGAGAGAGATTTTTCAAATGCACTTCCCTGCCTGGGCAAACTATTAACCAGAGAAGAAAGTGCTTTTTCATGCATATTCACCAACCTCTAATTTCTTTCCTCCTTGCTCACTCTGTACTTTCCATGCCTCAGGCAAGTTTGGGTTTTCTTCAAACAACTGATCAATCCACAAGTATTTATTTGTTAAAAACTTACTCTGTACCTAGCACTGTATATAGAAAGAGAGTAACATCTCTTTGTGACAATATGTAGGGGTAAAAATTACTTACTGGAAATATATTGATCTGATTTTTTTTTTTTTTTTTTTTTTTACAAAAAAAAAACCCTAATTCCTTGGTCAATTAAAAGCGTTTCCTGCAGTCACTCGCATTGTGGTAATTGCTAGAGAGATGTTGCCCCCTGCAGGCTGAATGTGGAATTACGGAACTGGCTGCTTGTGGCCATTTAAACCCACGTGTCCCTACTTATGGAGAAGGCAATGGCACCCTACTCCAGTACTCTTAACCTGGAAAATCCCATGGACGGGGGAGCCTGGTGGGCTGCAGTCCATGGGGTCGCTAAGAGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGGCAACCCACTCCAGTTCTTGCGTGGAGAATCCCAGGGATGGGGGAGCC EMBV3_00057 ACGCGGTCCCGTCGAGGGAGAGCGTCTTTGGGACTTCTTTCACCCTAAAAGAATACAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25696 TGTTCCAGTTGCTGGTGGAAGACATCATTGAGGAGGTTCAAGTGCTGGTGGAGAAGGAGC Gene GeneID:100299152|LOC100299152:XM_002700452:38_cdna Constitutive 0 NULL GeneID:100299152 X GENE LOC100299152 NULL hypothetical protein LOC100299152 EMBV3_43124 ACACTACTGTAAACGTGTATGTGACGTCTCTCCTTGTCCTAGGTTTACCCTTTCCTCATC Gene GeneID:282147|ATP6V1A:NM_174504:35_cdna Constitutive 2 NULL GeneID:282147 1 GENE ATP6V1A ATP6A1 MGC126942 ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A EMBV3_38873 CAAATCGACAATCTAAGGACAAATCATCAGTATTTAGCATTTACATGTGGCTTAATCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32120 GGCAAATATTGTGAAAGGCCTGTATACTCTCAGACCAGAGTGGGTTCAGATGGCTCCGAC Gene GeneID:100337346|LOC100337346:XM_002698541:38_cdna Constitutive 0 NULL GeneID:100337346 26 GENE LOC100337346 NULL chromosome 10 open reading frame 46-like EMBV3_24874 TGCACATGAAGCGTTTTGTCAAGGATCTGGGAAATCCCTCAAAGGTGTATGAAGTGGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06777 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22105 CCTCCGACTGGCCACAGAGGTGAACTGGGATGAAGAAAAGGAATGTTTTGAAAGCCTCAG Gene GeneID:533652|MLH1:XM_002696937:499_cdna Constitutive 1 NULL GeneID:533652 22 GENE MLH1 MGC140127 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) EMBV3_09274 TGATGGGCAGGGGAGCAGAAGGGTTTGGAGGCAGAAGCGTGGAGGGAAATGAAGACTTAA Gene GeneID:509388|PCDH1:NM_001083655:217_cdna Constitutive 0 NULL GeneID:509388 7 GENE PCDH1 MGC151820 protocadherin 1 EMBV3_05269 AGTGCTGCATGGAAAGGCAATATCTCTGGTGGAAGAAAAACTCGTCTACATCGACCTCCG Gene GeneID:525624|NBEA:XM_002691752:276_cdna Constitutive 0 NULL GeneID:525624 12 GENE NBEA NULL neurobeachin EMBV3_15669 AGTCACTTAAAGACCTGGTTAAAGAAAAAGGGATGTGCTGTTGTTGAATTCAAGATGGAA Variant GeneID:515290|HNRNPM:XM_002688877:104_cdna 360^412 4 EMBV3_22601 GeneID:515290 7 GENE HNRNPM HNRPM heterogeneous nuclear ribonucleoprotein M EMBV3_19109 TGCCCAAGCACAGTAGCCGCTCAGCCCGTAGCCTGGCCCAGGGCCTTGAGCAGGAAATAA Gene GeneID:617922|MYADML2:NM_001076948:138_cdna Constitutive 1 NULL GeneID:617922 19 GENE MYADML2 NULL myeloid-associated differentiation marker-like 2 EMBV3_16092 CTCAGCTGCATTGGTGAGGTTTTATTTCTCGAGCTGACAATGGTGGATGCTGCGGTGATC Gene BVT0102_022074 - 0 NULL GK000019.2:35263547-35385544 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093454 TCONS_00093456 TCONS_00093453 TCONS_00093455 1 XLOC_057153 NonCoding TCONS_00093456 XLOC_057153 NonCoding NonCoding - 19:35361679-35364524 - TSS70098 2619 3 TCONS_00093456_6 97 0.455517373043146 2 0.079817158931083 0.00118843874574254 0.000110037109754165 0.000457452667123008 0.00119432992312566 0.000643886981647193 0.000403106942617974 0.000328533575083667 0.000475375617717323 0.00195045179751539 7.99809530489325e-05 9.53726904978187e-06 3.65236835096724e-13 1.96347177103823e-07 0.000321546104289281 0.000159079661210721 4.95391413505572e-05 0 0 0.00209510335146513 0.000913662978343635 0.000690459881848084 0 1.36819334459976e-06 5.69970197228372e-14 0.00127454601299885 0.00179565228065525 4.08472445600443e-09 0 0 0 XR_232761.1 LOC786451 PREDICTED: Bos taurus F-box only protein 16-like (LOC786451), 1e-42 179 81.35 0.0725467735777014 0 noncoding 1 0 1 1 -0.53029606364123 0.0355676611273415 0.0391886864401541 0.553127482997825 AAATACCTACATTTTATCTTCCAGCAAACAAAATTTAGATGTTGCTGGTGGAGCCAGAAAGAGCCTCAGCTTGTCAGCGACTGTCTGCGGGATTCCTGAGTTCTCCAGCATCATCTCCCAGCAAGTTCAGAACATTCTACAGCTTCAGCAAGATGTGAAGACTTCCTTTGTCATCAACTTGTATATGTGACTCGGACAGAAAAGATCCTGAGGGCAGAGGCGAGGAGACCTGCTGAGCAGGGCGGATGTTTGAGTGGAACTGAGTTTATAAGTGGCCAGGACAGCAGCAGCAAATGTGGTCGTGTTTTCACAGCTTTTACATCCAATGTGTATAATACTCAGCTGCTGGAGCCCGCTGTCAGAATGAGTTGCATCACCCCAGGACTGATCGCATCTAAGGAACGTCAGGGAAGATAAAGTTCCACCTTGGCTCAGCCACTGTGGATCTCTGTGACAGAACCTTGGTCTTAACTCACACACCTTGTCTCTTGGTGGTAATAACACCTTGATTTCCTGGGAGGAGCATTCCTTCCCACTTTATGCCCACGTGGTTCAGCCGGGGCTGATACTGCCTCTGGGATGCACTGATGCTCCTGTGATGCAGGTTTAACCAATCAGAGTGCTCTGTTTCCCTGGCCACAGTAGCTGGCTCAAGGATGGCCACATGACCCAAGCCTGCTGGCAGTTTTGCAGGGAACATCAAGCCTTGCTAGAACCTCCAGGGGATGTGAAGCTGGATGGCTGCGGGCCTGAGGATAAAGCCAACATGTAGGAGAGCAGTGTGGAAACACATACAGAGACACCAGCTGGGCACCTGGATCCAACTATGCCTGAAGCTTGTGATACACCTGAAGCCAATATAGTTTACCTGTCTGCATAAACAGCCTAAGTTTCTCTTCTGTCACTTGTCTCTGAGAGCACTGAGGCTGCTTTGCCTGGAGAAAGAAAAATTGGGGTGAGGAAGGTAGGGGCTTGATGTCTTCAAAGACCTGAAGGGCTTCCCTGGCTGGCTGTACGTATATGCACACTGATTTCCAGTGGGAGGAAGGACTCTTCATGAGGCAGGACCTTCCCACAGTGAGAACTGTTCAAAGAGGGCTGTGCACTGGCTCAGGAGGGAGGGAGCCCCCCTCCTCAGGGCTGGGCAGACAAGGAGCATGTGGTGAAAGGGGCTTAGGTTGGCTGCAAGGACCATGGTCCTGTCATCGGATGAGTATGGCCTGGGACCTCAGACCCGCTTTAGTGGACAGCTGGGGAGCATCAGTGACTCCCGTGCTAAACTGTAAAAATGTTTAGGATCGTCAAGAAGGTCCAAGAAGTGTTCAGTGATCACCGCAGCATCCACCATTGTCAGCTCGAGAAATAAAACCTCACCAATGCAGCTGAGCTCCTGGTCACGGAGCCGCCTCTGGCTGGAAACTCTCACTGCATGTGCACCATCCTAAGGGTGATGGAGCCCACAGGTCTTTCCTAAACAGTGAGAATTGTCCTACTTTCAGGCTCTGCAGATTTTTCGTTTATTAACAGTGGTGAAAATAAAAGTGCTTGTTGTTATTGTTCAGTCGCTAAATCTTATCCAATTCTTTGCAATCCCATGACTGCCGCACACCAGGCTTCCCTGTCCTTCACCATCTCCCAGTTTGCTCAGATTCACATCCACTGAATCACTGATGCGATCTGACCATCTCGTCCTCTGCTGCCCTGTTCTCCATTTCCCTTCAGTCTTTCCCAGCATCAGGGTTTTTGTGCTTAGCTGCTAATAGAACATGTATTTTTCCTTTCTTCCTTCCTTCTTCCACCTTCTCTCCCTCCCTTCTTTTTTTAAGGATGGTTTTATTTATTTATTTAATATTGGCTGCACTGGGTCTTCATTGAGGCATGCAGGCTTCTCTAGTTGTGGTGTGTGGGCGTCTCTCATTGCAGAGCCTGGGCTCTAGAGTGCACAGGCTCAGTAGCTGCAGTGCTCAGGCCTAGTTGCCCTGTGGCATGTGGGATCTTCGTTCCTCAACCAGGGATCGAACCCATTTCTCTGCGCTGAAAGGCAGACTCTTAACCACTGGACCACCAAGGAGTCCTTTCTTTCTTCCTCCCTCTCTCCCTTCCTCCTTTCTTTCTGGTAATAAAAAACTATTACAAAAGCAGTCCTCAAACCCTTTTTTTTATCTAGTTTGCATAAAAGCTATTCCACCCCCCAGGCCCTGGCCCCCTTGCACCCCTGCTCCGTGTCTGGGCTCCGTCTCGCCTCCCCACCCCTCTGCACGGTGTGGACAATCAGTGTAAGGGCTGTGAGGACTGAGACTGAGATGAGCTCCCCCCGACCCCTTGGCACGTCCCCGGGCGTGTGCGTGGTGTGGGCTCGGCTCTGGCATTAGAGGTAATGACGGTCATCTGGGCAAGTTGCCCCAAGCTCCCCCGAGCCCTCCCTGCTCACCCGCCTCATCCAGGTGGTCGTGAAATCCTGTCAGTTCCACCCTCTGCTCACCCCGGGCTCACAGCCTCTGTAACTTCTGTCCTGTTTCAACACCCCGTCCACCCTCCTTGCAGTGGCCTTGTTCCTTCCGCTGTGTCCGTCTCTGGCTTGCAAGGCCCCCCGCACCCCAGGGCTGACCTGTTCACATC TCONS_00093457 TCONS_00093458 s 5' 21078 TCONS_00093457 TCONS_00093458 s 5' 23922 EMBV3_06751 ATGCAAGTTAACTGCTTTCTTGTTAAGCCATAACTACATATAACACGTATAACTCTTACC Gene GeneID:507517|TKTL1:NM_001045972:43_cdna Constitutive 2 NULL GeneID:507517 X GENE TKTL1 MGC134374 transketolase-like 1 EMBV3_05831 TGCAACAAATCAGTATTCAGCGGCTCTTCACTATTACCTTCAGGCGGGAGCTGTGTGCTC Gene GeneID:100124522|INTS8:NM_001102556:290_cdna Constitutive 1 NULL GeneID:100124522 14 GENE INTS8 MGC143405 integrator complex subunit 8 EMBV3_11619 ATATCAAGATGGCAAGAACGGCCATTTGCAACCTCATTCAGGGAAATCCTCCATCAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20804 ACTTTCTTTTGGGGTGGAGGATGGAGGGTCTTGAATATTGGTATAGTGGGGGGAGATGGC Gene GeneID:540006|ZCCHC12:NM_001076197:23_cdna Constitutive 0 NULL GeneID:540006 X GENE ZCCHC12 MGC143376 zinc finger, CCHC domain containing 12 EMBV3_10461 GCTGAGACCCGAGCAGAGTTTGCTGAAAGGTCGGTGGCAAAGTTGGAGAAAACCATCGAT Gene GeneID:497015|TPM2:NM_001010995:23_cdna UTR3_Alt 3 NULL GeneID:497015 8 GENE TPM2 MGC129100 tropomyosin 2 (beta) EMBV3_17329 ACCTGTAGCAGTGTCTCTAGAAACATCCCTTTCCGTTAAGAGCCCCCCTAAACGTCACAC Gene GeneID:784749|ANKRD27:NM_001102532:799_cdna UTR3_Alt 2 NULL GeneID:784749 18 GENE ANKRD27 MGC166150 ankyrin repeat domain 27 (VPS9 domain) EMBV3_26748 CCTTCGTCACCAATGTGGCCCTCAAAAAGGTGATTACAGCCTGCCAAGTGTTTGTGGTGG Gene GeneID:100337006|LOC100337006:XM_002691930:5_cdna Constitutive 0 NULL GeneID:100337006 12 GENE LOC100337006 NULL ABCC4 protein-like EMBV3_15656 GAATCTGCAGCACAGAGTCCAGTGTTTTCTCACTTAGCATCTTCTCTCCGGGGACTTGGG Gene GeneID:100337292|LOC100337292:XM_002691951:1_cdna Constitutive 0 NULL GeneID:100337292 12 GENE LOC100337292 NULL ATP-binding cassette, sub-family C, member 4-like EMBV3_03940 GCATCCTGTCTTTGCCTACCTGAAGGATAAGCTCCCCTACCCTTATGATGACCCGTTTTC Gene GeneID:533088|GPX2:NM_001163139:154_cdna Constitutive 0 NULL GeneID:533088 10 GENE GPX2 NULL glutathione peroxidase 2 EMBV3_38371 TTCGAGAGGAATTTAAAGCCGCATTTTCTTGCTGTTGCCTTGGGGTTCATCACCGCCAGG Gene GeneID:529603|HCRTR2:XM_002697173:203_cdna Constitutive 0 NULL GeneID:529603 23 GENE HCRTR2 NULL hypocretin (orexin) receptor 2 EMBV3_16151 CGTCACTGGGACCAGAACCTGCAGCTCCACCTGCTGTGCTACAGCCCCGCAAACATGTGA Gene GeneID:506558|VWA5B2:XM_002684876:81_cdna Constitutive 0 NULL GeneID:506558 1 GENE VWA5B2 NULL von Willebrand factor A domain containing 5B2 EMBV3_42174 ATACATGTTTCAATGCTACTCTCTCATATCATCCCACCCGCGCCTTCTCCCACAGAGTCC Gene GeneID:100140899|LOC100140899:XR_084144:163_cdna Constitutive 0 NULL GeneID:100140899 X PSEUDO LOC100140899 NULL similar to Sprouty-related, EVH1 domain-containing protein 2 (Spred-2) EMBV3_31956 AACTGAAGCCTGGAACAACCCAGCCCTGACCATGGAAACCACAGCAGTGCCCTATGAAAT Gene BVT0102_034642 + 1 EMBV3_19151 GK000001.2:43054435-43541935 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003154 TCONS_00003155 TCONS_00003157 TCONS_00003160 TCONS_00003162 TCONS_00003156 TCONS_00003152 TCONS_00003158 TCONS_00003153 TCONS_00003159 TCONS_00003161 1 XLOC_000804 NonCoding TCONS_00003153 XLOC_000804 NonCoding NonCoding - 1:43055268-43155368 - TSS1646 865 2 TCONS_00003153_1 62 0.234682080924855 5 0.991408505579476 0.00447826946260859 0.00571072721104107 0.0046124997537795 0.00368155355178648 0.00414728393403354 0.00280954000021874 0.000729322762914915 2.73506808256637e-104 0.00220993283070756 6.31446718869808e-05 7.34092669042241e-62 0 0.000195838386733352 1.71946684975441e-58 8.37080843059108e-05 0 0 0 0.0019132698767712 0.00388365097179985 0.00370563141069635 0 0 0 0.00217057880323206 0.00145767285489836 0.00367881465337385 0 0 0 XR_229214.1 LOC101903020 PREDICTED: Bos taurus uncharacterized LOC101903020 (LOC101903020), 2e-10 71.6 77.78 0.113294797687861 NR_104234.1 ZNF385B Homo sapiens zinc finger protein 385B (ZNF385B), transcript variant 5e-17 93.3 79.34 0.138728323699422 0 noncoding 1 0 1 1 -1.14643968050083 0.000498142001457178 -0.0347404073723385 0.638267801160178 GTCTTCTACTGGCTTGAAGCAGGCAAGAATTTTCAGTGTTTTTTGTCCAGAAGAACTTGGCTTGAGATAAATTTTGGCTGTGCTCAAAGTTGAGTAACTAGGACATGAAAGCCGGGCTGCTCAGAAGACAGCCAGTGAGCCCAGCCTCCTGCCTCAGGCAATGTATGTCCCAGTCAGAGTCCTACTCAAGAATTCATGTCATCAGAAGTAAGTGGCTTGTTCTTATTGAAGAAGACATCGCTTGGAAGGATATGCCAAATAGTGTCCAAAGACATGAAGCAAGGAATCCTTGAAATCAGAAGAGGAGGCAGAACTGAGAGTCATAAGCTACCACCTGAAAAAAATTCTACCAGCTGTTGCTGGTTTTCAAGATGGTGAAGAGGGGCATGCGCTGAGTAGTACAAGTCCGGAGTCACTGGATAAAGGCAACAAAAACGGGTTCTCTCCTAGAGCCTCCAGCTAGGAACGCAGCCCAGCAGAGACATCTTGATTTTAGCCCAGTGAAACCCAGGACAGACTTCTGACCTCCAGAACTAAGACAAGGAAATATTGCTTCAAGAGATCTAATTTGAACACTGTGCCAGCCAAGTAGTCTTCAGAAATATTCACAATCCATGCCTTCAAGCAATGTTATTGAGTACCTACTGCAGGAGGTGGAAAATACACAAATAAGTGGGTGAACAACTGAAGCCTGGAACAACCCAGCCCTGACCATGGAAACCACAGCAGTGCCCTATGAAATGGGGAGGCAATGACTGGGAAGAAACCTGGGTCCCTGGAGCAAAGCTTCCCACCACCAAATTCCTCAGTGGTCACCATGCCGGGCAGGGGATGGCAGCATCTGCTGGATCACAGTTTTGGGAGC TCONS_00003150 s 5' 222389 TCONS_00003150 s 5' 222452 EMBV3_30570 AACAGACAAGGTGGCTATTATTACCAGAGAGAAGGAGGTCACGATGGAGGGAGAGATACA Gene GeneID:788654|HRNR:XM_002686069:318_cdna Constitutive 0 NULL GeneID:788654 3 GENE HRNR NULL hornerin EMBV3_01213 AATGGAGCTAGAACGGCAGGAAAATGTATTGGTGATCTGCCATCAGGCTGTCATGCGGTG Gene GeneID:282304|PFKFB1:NM_174572:8_cdna Constitutive 1 NULL GeneID:282304 X GENE PFKFB1 NULL 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 EMBV3_10130 TGGGAACCAGGATGGAAGGAGGAGATGGTCAACTTGCCTTGGTGGGGGTTTAAGGAATCA Gene BVV0102_185723 + 0 NULL GK000005.2:30735853-30821250 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26266 TCCACACAGAAGGGAGGCCCTATAAATGTGAACAGTGCGGCAAGGGCTTCAGTGGGTTTT Gene GeneID:538686|ZFP112:XM_002695086:519_cdna Constitutive 0 NULL GeneID:538686 18 GENE ZFP112 NULL zinc finger protein 112 homolog (mouse) EMBV3_35681 CGCAGCGGGAGCCGAGAGCGGCGGGAGGAGCAAATCGATACCGGCTGCATTTTGAGCGAG Variant GeneID:532528|GNL1:NM_001103272:150_cdna 364^457 1 EMBV3_06618 GeneID:532528 23 GENE GNL1 MGC142905 guanine nucleotide binding protein-like 1 EMBV3_36152 TTGGTGGTTCTTGTGGAGAGCAGAAAGCCCAAGAAGAGGAGATGGACAGGGCAGCTGGAA Gene GeneID:522099|GABRR2:NM_001077946:2_cdna Constitutive 0 NULL GeneID:522099 9 GENE GABRR2 NULL gamma-aminobutyric acid (GABA) receptor, rho 2 EMBV3_20343 TGGGAGTGTGCCTTCCAGTGCAGGGGATGCGTGTTTGATCTCTGTTGGGGAAACTTAAGA Gene BVT0102_243117 + 0 NULL GK000026.2:13763564-13831821 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23623 CGTCAAGCTGCCCTGCACCAGCTGTTTGAAAAGGAGCATCAGCAGTACCAGCAAGAACTA Gene GeneID:504348|C3H1orf189:NM_001038026:70_cdna Constitutive 0 NULL GeneID:504348 3 GENE C3H1orf189 C1orf189 MGC133676 chromosome 1 open reading frame 189 ortholog EMBV3_01279 CCACTCTTACTAACACCTGACGGTACGATGCCCTGTGCGCGTTACTCAGCATGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_09073 GTCTTCCTGTACAGAGCATACCTGGCCCAGATGCACTTCCGGAGGAGCCGTGGGAATGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36181 ATGAAAGCAGTTTTGACTTGAAACCCTCTGTAAGAACTCCTCATCCGGAATTCCAGAAAG Gene GeneID:100125925|LOC100125925:NM_001105495:2_cdna Constitutive 0 NULL GeneID:100125925 11 GENE LOC100125925 MGC152381 UPF0638 protein B EMBV3_28190 CGCTGCTGGTCCTGCGACTGCTTCTCGCTGGACTTAAGGATGCTGTGACCAGAAGATGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34011 CAGGAAAAAATATATGAAGACAAATCTAAGGTTTCTGTAGCTGGATCCAGCACCGGAAGA Variant GeneID:540605|CREM:NM_001034710:148_cdna 198^321 2 EMBV3_02218 GeneID:540605 13 GENE CREM MGC127769 MGC140070 cAMP responsive element modulator EMBV3_05729 CTGACAGTAACACAATAATAGTAGGAGATTTTAACAAACACCCCACTCACAGTAGTGAAC Gene BVV0102_136053 + 0 NULL GK000012.2:37656790-37744733 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27800 CCCCCAGCGCGCCCAGCTTCTGCGGATCAGCCCAGAAGGCTCTTTGTTCTGGATAAACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26959 CGAGGGATAAAAGAGTGGTAGTCTACACCTTAGAGCGTAGGGCTATAAGGTTCCAGGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01493 GCTCATTTGGAAAAAGAATCCATTGCTCAGGGCATTTGATGTAGAACTGCTTTACATAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08907 GTGGCCAATGGTTTCTACATTCCTTGCTGTTTGTGCCTGATTGTCCCATCCGTTTAAAGG Gene BVV0102_156133 + 0 NULL GK000011.2:10430854-10460093 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00110 CCTTTTCCTTCATGGCTTTCCAGGCCTCAAATGATGCTACGGCTTCTTCTCTCTTAGCAG Gene BVT0102_425244 + 0 NULL GK000017.2:1931372-2059568 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17919 GGCACACTTCTGGATATGCCTGCTCCTAACGCCCAATGAGTCTTCTGAGCCTGTGTACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16824 AAACAGTTGGGCTAGGGCCAGGCAGCGTGCCAAGGTGTAATTGTCTTTTTTTTCCTGCAG Gene BVV0102_348988 + 1 EMBV3_22552 GK000025.2:36045874-36050525 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26431 GTGGCGATCTGTTCCCAACTAGTCCCTTTAGACCAGTAAGATAACTTCCACAGCAAACTC Gene BVV0102_048303 + 0 NULL GK000021.2:69254559-69266380 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120197 TCONS_00120199 TCONS_00120202 TCONS_00120194 TCONS_00120196 TCONS_00120195 TCONS_00120200 TCONS_00120198 1 XLOC_073109 Coding TCONS_00120200 XLOC_073109 Coding Coding TRAF3 21:69173217-69258702 j TSS89836 6278 1 TCONS_00120200_1 485 9 0.926664638996771 0.000533661639868627 1.51522374664562e-07 0.000733902307062842 0.000498770360288587 0.000352537087195498 2.74375210159623e-05 0.00016842385580632 7.40194276898095e-10 0.000669227995724274 1.90339884054196e-11 3.3291998613936e-10 4.75268076180506e-20 6.67888736768488e-05 0.00023820591850932 0.000347979625703245 2.74163162452455e-08 6.89672025661349e-09 3.86516412445719e-10 0.000261351971301835 0.000309213379957427 0.000592716303523553 5.55640757237847e-05 0.000148182846794216 0.000556713328237858 8.97043213446957e-10 9.12486609142837e-08 0.000320460338208953 1.1322205298801e-06 8.1437953693048e-05 3.33034741304116e-08 XM_005222153.1 TRAF3 PREDICTED: Bos taurus TNF receptor-associated factor 3 (TRAF3), 0.0 2554 100.00 0.225390251672507 NM_001199427.1 TRAF3 Homo sapiens TNF receptor-associated factor 3 (TRAF3), transcript 0.0 3406 82.40 0.528830837846448 TCONS_00120200_1 sp|Q60803|TRAF3_MOUSE TRAF3_MOUSE TNF receptor-associated factor 3; 0.0 854 76.76 0.997938144329897 2 coding 0 0 0 0 -0.142978143029996 0.505156280362979 -0.0247872004503937 0.602976666379347 CCTGACCGCAATTGGCGTCTGTTTGCCAGGTGAGGGACTCCACTACATTATCTGAAGAAGGATAAAGTTGACTCTGCTTTGCTTCTTTACTGAAGTCTCTTCCTGCCTGGTCAAGCTCAGATATATTCTCTTGCAGCAAACGACACACAGGATGGAGCCCAGTAAGAAGCTGGACGCGGCCGGCGCCCTGCCTGCCAACCCCCCGCTGAAGCTGCACCCCGAGCGCGGAGCCGGGCCGGCCGTGCTGGTCCCCGAGCAGGGTGGCTACAAGGAGCGCTTCGTCAAGGCCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCGCCTGGTGCTCTGCAGCCCCAAGCAGACGGAGTGCGGGCACCGCTTCTGCGAGACCTGCATGGGCGCCCTGCTCAGCTCCTCCAGCCCAAAATGTACTGCTTGTCAAGAAGTCATCATCAAAGACAAGGTGTTTAAGGATAATTGCTGCAAGAGGGAGATTCTGGCCCTTCAGATCTTCTGTCGGAACGAGGGCCGGGGCTGCACGGAGCAGCTGGCCCTGGGGCACCTGCTGGTGCATTTGAAGAATGACTGCCAGTTTGAGGAGCTCCCGTGTGTCCGTGCCGACTGCAAAGAGAAAGTGCTGAGGAAGGACCTGCGTGACCACGTGGAGAAGGCCTGTAAATACCGCGAGGCCACGTGCAGCCACTGCAAGAGCCAGGTCCCCATGGTCACGCTGCAGGTTTCCTTGCTGCAAAACGAAAGTGTAGAAAAAAACAAGAGCATACAGAGTTTGCACAACCAGATATGCAGCTTCGAAATTGAAATTGAGAGACAGAAGGAAATGCTTCGAAATAATGAATCCAAAATACTCCATTTACAGCGAGTCATCGACAGCCAAGCAGAGAAACTGAAGGAGCTCGACAAGGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAGGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCCAGAACCGGGTGACCGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCAGGCAGCGCGCAACACAGGCCTGCTGGAGTCGCAGCTGAGCCGGCACGACCAGATGCTGAGCGTGCACGACATCCGCCTGGCCGACATGGACCTGCGCTTCCAGGTCCTGGAGACCGCCAGCTACAACGGCGTGCTCATCTGGAAGATCCGCGACTACAAGCGGCGGAAGCAGGAGGCCGTGATGGGCAAGACGCTGTCTCTGTACAGCCAGCCCTTCTACACCGGCTACTTCGGCTACAAGATGTGCGCCAGGGTCTACCTGAACGGGGACGGCATGGGCAAGGGCACGCACCTGTCGCTCTTCTTCGTCATCATGCGCGGCGAGTACGACGCGCTGCTGCCCTGGCCCTTCAAGCAGAAAGTGACGCTCATGCTGATGGACCAGGGGTCCTCGCGGCGGCACCTGGGGGATGCGTTCAAGCCGGACCCCAACAGCAGCAGCTTCAAGAAGCCCACTGGGGAGATGAACATCGCCTCCGGGTGCCCCGTCTTTGTGGCCCAGACTGTGCTGGAGAACGGGACGTACATCAAAGACGACACCATTTTTATCAAAGTCATAGTGGATACTTCGGACCTGCCGGACCCCTGACGCGTCCCCGGGGCGGCGGATCGAGCAGAAGGCAACTCCTCCGGGGGGTTTGAACCGGCCGTCTCCACCGAGGTCCTCGCGCTCAGAAAAGGACCTTGGGAGACGGAGGAAGCAGCAGAAGGCGGCCGCGGGCCGGCGGGAGGAGCCACGCGTGAGGACTCACCCAACACGTTTTGTAATAGACTAGCGACACTTCACTCTGGAGAATTATTTATCCTTCGACGAGATAAATACTGCTGTCAGAGAAGGTTTTCATTTTCATTTTTAAAGATCTAGTTAATTAAGGTGGAAAACATATATGCTAAAGAAAAGAACCATGAATTTTTTTCTTCCTTAAACTTGAACACCAAAAAAAAGAACACACACACACCACACACACACACACACACACACACCTGGGGATAGCTGGACATGTCAGCATGTTAAGAAGAATTTATGAAATAATGCAATTCTGATATATTCATTCTAAAATTCAAGAGTGCAATCTTGTTTCAAATATAGTATATTGTCTATTTTTAAGGCCTCATCTGGTCTCTGTTTTAATAATTTGTTTGTCAGAAGACCCTGAAGTACACCTAGGTCTTTTTTGAAAGTCTCTAAATTCAGAATCATTTTTTAATTTAAAGTTCTAAGATAATTGTTACTGCAAACATTTTATTTTAAAACGTTGATAGACTGATATTTCTTGGAAGAAAATGTAAAATATCAAACACTGGTTATCACTTGTGATAGGAAAGAGAATATTCAATCTGTTGTTATTTCTCGTTAGAAATGTAAACCTTCAATATCTGTCGTAGTTAATGACACTACTTCAAAATTACTATGAAAGGAAAATTGCTCATGGATGCTGTGCATCATTTTCAGATTTATAATTGTTTTCACCCTAAAATAGGGCATTAGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTTTTTAAAATTCTGCCCCATGTGTTCAGACACGCTCTCTCTTGCTGACAACACCGACTTCCGTGTCCAGTGTTGGGGGTGGGCAGGCGACTTCGCGCTGACGGCGGCCACAGCAGAAACCGTGTTCCCCATCCAGTCATAACTGCTGCATTCGCTCCAGCCTTTGCGTAGAGATGGTGGCATCCTGTACACGTGCCTTAGATGTGACTTGCTGCTTCTCGACCCCAGCTTTGTGTTCCCCGTGATTCCAGAAGGCGATGGTTCAGCCAGACTCTCTCTTGACCACTAACTAGACCTTTGCCTGCTCGGGGGGCCTCCCACAGCCCCGTCCGCCGGCTCCCCACCCCCGCCCCGGAGCCTCCGCCGCTTCGTCATCCCAGATTCCAAATCTCTCGGGCCCACGGGCGCAGGCAGGGCCGGGCAGGAGCTGCGCCTTCGAGTCCCGGGCGCGGGGCCCAGACGCCCGCCGCGGGGCCCTCTGAGCATTCCAGAGACCGCCAACCCGGGCCGCAGGGCTGGGCCACGGGCGTCCTGGGGCCGCCCTCTCACGGGTAGGGCGGCCCCGGGGCCCGTCGTCCGGCCGCGCCCGCCCGGGGCGCCTCTCACCCCGTTCCCCTTCTCTCAATGGTCCAACTGTGAAGAGCGGGCCTGCCCTGTGCCCCTGCTATGCACCCCGCTCCATGGGTGCTCTTACACTGATGGGTGCTACACGTGACGGGTGCTTCTTAGGCGAAACCAATGTGTGTGAACCGCGCATCTGTGCCGCTCGTCCAAGAGACGCGCCCACGACGGGCCAGCCGGCCACGCGCCCCAGACTGCCTGCCGCGGGCTGCCGGCGGCCGCGGGGGCGGCCAGGGGTGCCCGGCGGCCCCGCTTCTCTGGTGCTGCCGACCGCCCTGGGTGTGCCTTCGCCCCAGTGCCTGCTGGAAGCACCTCCTCTCCACCGCGTCCCTGGGCTTCCATAAGTGACCTCATGGGTTCCCAGCACCCGCCCGCCCGCAGTTACAGCTCCGTCGTCTTCATCTCCGTTTCTTTCCCTCCCCGCCCCCACCCCAGTTGCTTCGAGGGCGGATCGCGTCCTCGGTCCCGCCGCCCCCCCCACCCCCGTCCGCTCACAGAGGAGGGGCTCCTGCAGGTGCTGCGGGACCACAGCTCCCTCGAAGGTGCCTGGACTCCCGGGGCTCCGGGCGGCCCCCACCTCCAGACGGTGTTCCCGGGAGGCCAGAGGTGACCGACGGGGACCGCCTGCCACTTCCTCCTGCTTCACTAGAAGGACGGACAATACTGACGGAAGCAGCATCTCGGTCTGTTATAAAACAGTTCTTTCCCCGCCCTGGGTGGGGAGCCTGTCGGCAGCACTCCGGAAGCATCTGGCCAGTGGTGAGGGGGCTTTCCAGGAGCCCCTCTAGTGGGAGATGGACCCCCACCCCACCCCCGGAGCCGTGGGACCCGGCTCACTGTGCCCGGGGTGGACGCTGGGTCGTGGCGGGAGCTTCAGGCCGCGGTGAGCCGCGGGGAAGCCAGCCACGCAGGGGGGCGCCGCTCTGTGGTCCATCTGACGTTGGGCCCCCTCCAGCCCCACCCCCACCAGGCCCCGGCCAAGGGACGGGTTTCAGACACGGCGCACAGATGCGTTTTCCGCATTAACTCAGTATCAAGTTCCCCACGGAACAGGCCGTTCCAGTGCTTTAGAGGAACCGCGGTGAGTCCCACGCGGGGTCAGCCCGCCTGCGTCCCAGCCCCATCGCCTGTCGTGGAAACGGAGACCTGCAGGGCCCCTGCGGCCGGCTGAGGGTCTTGCCTGTGGGTGGGGGCCGGGGGGCTGGGCTCTGGCCCACCTGGGCCTCTGTCACAGGTCAGGGGTTTTCAGTCGGCGGTTGTATCGGTGACACGGAGACAGCAGAGACGCGTGTGAATTGTTCACAAGCCCGTCCCACGGGAGGGTGGCACGGTCACTGTGCAGGTGGGTGAGGAGGGCCGCCGTCTGCCCCCTGCCCAGCCCCAGAGCCCCGCCGCGGGGTGAGCAGGCAGCTCCCAGCCGGCGGCCCCCCTGTCCTGGAGGCGGGCCCCACCAGGCCCTCAGACGGCGGCAGGGGCCCACGTGGCCATCCTGGCCAGAAAGGGGCGGGCGGTCTCCTGACAGCTCGTCTCCGCAGGGTCCCCAGCCACCTGCGGTCCCGCGTCCCCGTCGCCCCCCGGCACTCAGTGTCGAGGGATGGTCTCCCATGCCGGGCCTGGCATCCAGCCTGCAGCCTGCGGGCAGCCGGCCGAACCCTGAAACAGCAGGTGCGGGCCCCCGAGTGTACCCCAGGGGCGCACACCTCCAGCCACCCAGGCCCGCTGTGCCTCCCGGCCCACGCTCGGAGGGGCGACTGTCACCCTGAGCTGGGCGTGGACGGCTCCAGCCCCAGCATCTCCGCCCGCCCTCACGGGCGCTGGCCAGGGACCAGGAGCCACGTGGGGCTCAGCCACACCTCCGCCCTCCGAAACCCGCCCCTCTGCTGGTGCTGACCAGCAGGGCTGGAAAGGGCTCAGGCAGAGCTGGTAACCCCGCTTTGTAACTTCTAGTCCAGACTGTCACTGACCTGGCCGCAGAGGAGAGCTGGGGGAAATCCAGGCGCTCCTTTGCTCCGTGACCTGATGGCGGGGCAGGGGGCGGCGGGGGGTCCGTCACCCAGTCTGCTGCTCAGCCCAAGACCATGGTTCTGCTTTCTGTTCGCAAATCTCGATAGCTCTGTTTCTTCCAAAGTAGATCATGTCCCCGAGGGTCCAGGCCGGATGGGGTCAGCTGGGGGCTGCAGCCAGGGCAGGTGGCCGGCCGTCTCTGCGCTGGTTGCCCCCCGGGGAGCTGGGGCGGCGGGGGTGGAGGCGTTTCTGCTGGCCTCAGTGCCCGGGGCGTGGGGGTCGGCCCACGGGCAGAGGCCCGGATGAGTGGCTCGAAGCAGTGCCCGCATTTCATTTCTGCTGCTGCTGCTGCTGCGTCTAGTCTGTCTTGTGAACTCGCAACAAAAGAGGTGGAGTCCAGGGTGGCTGCACCACTCCTGCAGTCAGTGGCGATCTGTTCCCAACTAGTCCCTTTAGACCAGTAAGATAACTTCCACAGCAAACTCAACGACTTAATTGGTAAACACAAAAAGCTGGCATTATTTTCCAGGATTTCTATGAGAATTACCTGTAGAGTTAACAGAGTCTGTGGTCAAGGAAGTGTACATCCACGTAGACACTTTTGAGAATCGGTTCTTTCTTTGATGGCACACCTCTGCGTTCAGTTCTCTTACCCAAAACAAAGACCAAAGAAGGCCAATCTCTTGTGTGACTCTGTATTTTTAATCTGCCTGTTTTAAAAAAATAAAACCTTGCGTCTGTACAGCCGCTCGCTGTGAGGACCCATCTTGACAGTCCAAGTGATTGTGACCAGTGACCACGTCCCGTGTTCTTCTGCTCTTCTGAGAAAAAAACACAAAAGGACCGTGTGAGTTATTGCCCAGCAATAATCATGTTGTTAACTGTGGGTCAACAACATGTCTGACTTCCTGATAGCATTATTATGTTTGATATTTTTGTTTACTGTATATCTTGTGTGGTTTTATTTGGTATTTATTTGTGTTTTGAGGTCTTGCAACGTTTTTGTGTTCCTGATGCTAATAACTGAAGTTTGTAAGAGTGTAGAATGCCCAACTTTGAAATGCTGAAACTGTCTCATTAGAGGAAAATAAACCTGACTGAGGAGTCTCGG EMBV3_12187 AGAACCTTGGGGAAGTTGGCCCATATCTTACAGAGTTGTTCAGATTTCTTGGTGGGCTGG Gene GeneID:538782|LOC538782:NM_001076128:8_cdna UTR3_Alt 1 NULL GeneID:538782 7 GENE LOC538782 NULL hypothetical LOC538782 EMBV3_26859 GGTGGGTGTGTGATCGAGGCAGATGGCCCTGAGAAGAGCTGGAATCACCTGGAGGGATCT Gene GeneID:514453|ARHGEF16:NM_001101998:112_cdna Constitutive 0 NULL GeneID:514453 16 GENE ARHGEF16 NULL Rho guanine exchange factor (GEF) 16 EMBV3_33558 GTGACCCGTCCCAGTGAGGAGTTAAGAGTGTGGGGACTTCAAAAACAAGCCAATTAAGTG Gene BVT0102_093908 - 1 EMBV3_16147 GK000001.2:71280649-71396748 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40338 ATGACCTGCTTCAAACTGGCCCCTCCGCTGGACTGTGCTGAGGTCAAAGACTGTTCCAGT Gene GeneID:527631|PLA2G3:NM_001080910:68_cdna Constitutive 0 NULL GeneID:527631 17 GENE PLA2G3 NULL phospholipase A2, group III EMBV3_25618 GCTCCCGAGCCAAGTAGCACAGTTTGTCTGCGGTTCGTGATGATCCAAGGTTATCAAAAA Gene GeneID:523016|PAPD7:NM_001160157:26_cdna Constitutive 0 NULL GeneID:523016 20 GENE PAPD7 POLS PAP associated domain containing 7 EMBV3_14000 CAGGTTAATCTTCTCTATTTTTTAACGGATGTTACACCAAGTCTTCAGAGGAAGTCATGC Gene GeneID:537211|MGC159911:NM_001102197:70_cdna Constitutive 2 NULL GeneID:537211 27 GENE MGC159911 NULL UPF0636 protein C4orf41 homolog EMBV3_37450 CTGACCGAGATTTGCCAATCGCATAAAAGCCATTTACCTTGCAAGTGAGCTAGCTTCTCC Gene GeneID:404101|BMPR1A:NM_001076800:11_cdna Constitutive 2 NULL GeneID:404101 28 GENE BMPR1A BMPR-IA bone morphogenetic protein receptor, type IA EMBV3_36940 CCTGAGGGGTGGCATTTGTTTTCACGGCTCATCTGTGTCACTTCTTAACATAAGCTGGCC Gene GeneID:282257|IFNAR1:NM_174552:16_cdna UTR3_Alt 2 NULL GeneID:282257 1 GENE IFNAR1 NULL interferon, alpha; receptor EMBV3_03591 CTGTTACCGTGAAAAAGCAGCAGACAGCAGTGCATATCACACCATGAGCTGGTCCAATGC Gene GeneID:528971|PCNXL2:XM_002698790:155_cdna Constitutive 0 NULL GeneID:528971 28 GENE PCNXL2 NULL pecanex-like 2 (Drosophila) EMBV3_24098 AGTTTGTGAGTCCCCTTCCATACCCACCTCTCCCACAACCCTTGCAGTAATCCCTTTGAG Gene BVV0102_061894 - 0 NULL GK000015.2:55238660-55255744 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20206 GAAATGAGAGAATCAAGCCTGGCCGAGAAAGGTTTCAAGAGTGCCCAGATCCCTTTGACG Gene GeneID:785109|LOC785109:XM_002693391:33_cdna Constitutive 0 NULL GeneID:785109 15 GENE LOC785109 NULL similar to hCG1991759 EMBV3_18317 AAAGATCTTGATATGAAAATCCAAAAAGAGCAAGAAAGGCAGAGAGTTGTGCAGCGATGC Variant GeneID:533664|AP1AR:NM_001081532:65_cdna 412^510 3 EMBV3_05103 GeneID:533664 6 GENE AP1AR MGC155012 adaptor-related protein complex 1 associated regulatory protein EMBV3_16830 AAGAGCTTTACACCTCCTTCCCGTCATCAGAAAGACAGACCTGTTTCCACCGAGGGCCGT Gene GeneID:530282|LOC530282:XM_002696205:246_cdna Constitutive 0 NULL GeneID:530282 19 GENE LOC530282 NULL similar to glutamine rich 2 EMBV3_10858 GACCATCGTCACCTACCCCTGGTTCCAGAACTCATCCGTCATCCTCTTCCTCAACAAGAA Gene GeneID:281788|GNA11:NM_174322:5_cdna Constitutive 1 NULL GeneID:281788 7 GENE GNA11 MGC128352 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) EMBV3_32975 CATCTTTGCTGATAAACCTCTGGTAGTTCAGAAAATTTCTATGATAAAACATCCTATACC Variant GeneID:504256|CLGN:NM_001034205:11_cdna 528^609 2 EMBV3_11868 GeneID:504256 17 GENE CLGN MGC127998 calmegin EMBV3_31157 GTCAGCTCCTGACAACCTGTTAATGCCACAGCTGAACTTTCTTCTAAGTGCCACAGTGAA Gene GeneID:509305|COG6:NM_001035069:73_cdna UTR3_Alt 2 NULL GeneID:509305 12 GENE COG6 MGC127384 component of oligomeric golgi complex 6 EMBV3_17588 CTCACCACCTTCAGTGGGAATAGGGAAAAGGAATATGGGGTGTTTGCTAAGGTCTAGTCG Gene BVV0102_015287 + 0 NULL GK000021.2:34145565-34156311 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119243 TCONS_00119244 1 XLOC_072844 Coding TCONS_00119244 XLOC_072844 Coding Coding RPP25 21:34143656-34150372 o TSS89345 3929 2 TCONS_00119244_5 210 0.149147365741919 2 0.415189873417722 4.30872442239337e-05 9.03651617412967e-05 8.14791571691024e-05 0.000369867238869291 2.88797643200957e-05 6.37296597366413e-05 2.02459816819605e-12 2.57671097556871e-11 0.000197192058847255 0.00157814639073885 0.000773481703968518 0.00058381132058956 0.000120746666289053 0.0018211530693207 0.000579995243954974 0.00154610372796716 0.000214010492717886 0.00102177427545689 5.29286914959913e-05 0.000369598386542372 6.13806469188443e-05 0.000373654048495503 0.0010290880919955 0.000613333899787048 1.35327444073233e-05 4.72400122321112e-05 7.52481270908932e-05 0.000482992314047172 0.00035431551471895 0.00151480873379335 XM_005222015.1 RPP25 PREDICTED: Bos taurus ribonuclease P/MRP 25kDa subunit (RPP25), 0.0 4255 100.00 0.600152710613388 NM_017793.2 RPP25 Homo sapiens ribonuclease P/MRP 25kDa subunit (RPP25), mRNA. 0.0 1508 75.63 0.531432934588954 TCONS_00119244_5 sp|Q91WE3|RPP25_MOUSE RPP25_MOUSE Ribonuclease P protein subunit p25; 3e-112 324 86.93 0.942857142857143 1 coding 1 1 1 1 0.0154362052972693 0.881654175727134 0.00325052539298841 0.944825728339961 AAGGGACGGGGTCGGGGTGGGGGTGTCGTTCCTCTAGGAGTGGGAGAAAGAGGTCCCAGTCCCCAGAAGGCCGCTTTGAAATCTCTCATTGGGAGCGGGCAAGGGGTGGGTGGACTTCAGCTAAACCGCGAAAGGGCTCGGGGACCCGGCTTGAAGCGGCGTTTGCCCAGCAAACGCAGTTTTTATTTAGGTTGTAGGTTTATGAAGGTAGGCTCAGGTAGGGCTGATGGTGATTACAGGGAAACTTCAGCTGGCAGGTCACCCCTGGCACTGCCATGGCACCCCGCGGTGCGCGCACCTCCCAAACCCGGGTATCCGAGGACCACAGTGGATGCAGGCGAAAGGCTGGGGAGGCTGGGGCGGCTGGGGCGCGAGCCGGCAGGGCTGGGTAAGGGGCGGGGCCCGGCGGCAGGGGCGGGGTTCCCAGGCTCTGAGGCGGGGCACAGCTAAAGGCGCGTAGCACAGGGCGCCGAGATCGCCGAGTAGAGCAGCGCCCAGTGGAGAGAAGAGGAAGGCTAGGATCGCACCGTCCCAATCCGCCAGCCAGCGTCCACGCCGCTCCCGCACCCTTACCCCTGCCGGCCCTTGCCGGACGCGACCCACCGACATGCATCCCCGGGGCTGAGGCGGCCAATGGCGAAGCCCACGTCCCCGCAACGACGGCGCATGGAGAACTTCCGTAAGGTGCGCTCCGAGGAGGCGCCGGTGGGGAGCGGGGATGAGGAGGGCGGCCCGGGCTCAGGCCCCTTCGCCGACCTGGCGCCGGGCGCCGTGCATATGCGGGTCAAGGAGGGCAGCAAGATCCGGAACCTGCTGGCCTTCGCCACTGCCAGCATGGCGCAGCCAGCCACGCGCGCCATCGTCTTCAGCGGCTGCGGTCGAGCCACCACCAAAACCGTCACGTGTGCCGAGATCCTTAAGCGCCGCCTGGCGGGTCTGCATCAGGTCACGCGGCTGCGCTACCAGAGCGTGCGCGAGCTGTGGCAGAGCCTCCCTCCGGAGCCCACGCCGGGGCAGAAGCCTGGCGAGCCAGCCGCCAGTCTCAGTGTACTTAAGAACGTGCCCAGCCTCGCCATCCTACTTTCCAAGGATGCCCTGGATCCGCGCCAACCCGGCTACCAGCCGCCGAACCCCCATCCCGGCCCCTCGTCCCAGCCAACTGCTCCGACGTCCAAGAGGAGTCTAGGGGAACCTGCTGCTGGAGAGAGCTCCGCGAAGAGGTCACAACCCGAGCCAGGTGCTGCTGAAGAGGAACAGACCGCCTGAGAACTCCGGCCTCTGGGCCACCTGGACGGGCTGGATCCTACCCCCGAGCTTCGACCTTGAGACGCATCTCTAGCCTTTCATGCCTTGGTACTCTGGAACCTACAATATGGCAGTATAGACCCCAAGGCGACAAGAGGGGAACCCCAGGGAAGCTTCGTCGTGGGGTTGCTCCTCCACCTGTGTTGCCTGACGACACCTTCAGCTTTTCTGAACCATACGGGGACCTTCTTCAGGGAGGGAATGGTGGGCAATGGGACTCTTGAGCCTTTAACCCCAAGGGTTAAAGGTTCCTGTAGGATTCTTGAAGTGGGGTGGGAAGGTGGAAGCTGAGGAAAGCTCTTGGAATCACCCCACCATTGTCAGCAGAGGGCAAAGGGTTGGAAGCCACTGCTTGAGGGCGGGCGATTTTGAGTGGCAAGGGGTAAGGGGCTATTCTGCCCCTCACCCCAGGACAGTTTCTAGTTTTCCTTTCCCTGCTTTTAAGGAGCATCCTGAGATCATGGTGGCAGGGACGTCTCCATAGGCTCTTTTAACATCCCACTTTCCCCATGCTGGCCCAGAGGGAGAGACCCAGGACAGAACTCTCCATGCCACCTCCCCTGAGCCCCACAGCTGGAGTCTTGCTTCCAATAACACAAACACAAAAATGGTTCTGTCCCTGGGTTTTTTCCTAACCACTTGCCTGTGTAGAGACTGCTCTGGTCTGCCCCCTTGTGTCTCAGTCCCCTCCAGCCTGGAATCCTTAGCTTTTGGAGTCTTAAGGGTCAGGCACAGAAACTGGACAGCTTTGAAATGGTGCCGGGAGCACCTTACCCAGTGGCTGGTTCCTCCCTCTTTCTCAGCCCTTCCTGGCTAGCTCCAGTAGCTTCAGGGCTTGTGGCCAGAAGGGGACCTTTGTCACCTTATGTGTTACCACTAAGGGAAAGGGAGCAGCATACTGCTTTTCTGGAAGGGGGAGGAAAGTGAGCATCAGTGAACTATCCTGGGGTCACTGCCAAGGGTGGTAGACCCAACTGGGCTCCCTAAGCCTGCAGCCTCCTGCCAATAAACAGCCCTACCAGACGGCTGGCACAGAGCCCCCCAGACCCATGGATAGAATCTACCCTTCACTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGAAAGGACAGCACACCCTTGGGAGAGGGGGAGGAGAGACTGAGCACAAATCCACTGCTGGAAATTACTATTCAGCAGAGAAGCTGGGACTTGGGCTGTGAATCACTGCAGGCTCCCTGATAAGCTGCTGCCTCTGGCCCTGCACAGCTGTCTGTTGAGAGATAACAGCCTTATAAGCCTTTCTGCCCAACTCCAAGTCAGGTGGGAGGGTGGAAGGAGTGCTGTGTACTGGAAGCACTCTAGCAAATATGAGGGGGAGGGGCATATAGCTCCAAGATCATAGAAGCAGACCCTGTCCCCTTGCAACTTAACAGCATCCATGGAAAGGAAGAGATGGGGAAATATGTAAGTCACTTTGTAGGCAAAAAGCTGAAATAAATCCTTCTGCTGGTAACAAGAGGTAGGTTTCTGCAGTTGATAGAAGGGGCTCTTCAGGGAGTTCACCCTCACCCCCCAGCTCTGCTTGTGCTTTGGATAGGTGGGCCCTGTCAAAGAGACTGGCACGGGCTGCTCTCCCTAATGTCTTGTTCTTGATGAGTCCCTGGAGAGAGCCAAGGGATTGGGGTGTGTGAGTCTGACTCTCTCAGGAGCAGCCCAGGAAGTGTGGAGAGAATGTAAACTGTCCTAACAACAAGGTTGCCCTGGGCTGGCACTGGGCGTCCGCATCTGAATTTAAATGATACAACGCAGAAGAGGTCCTGCATGGTAGAGTCTTAGGAGAGACTGCTCTTGGTTCTGGAAGAGGGTCAACTTTCCAAGATCACTAGCGTCTAAAGTCCTGATTGCTGGGTCACCAGGACAATGCAAGCAGAGACTTTCTCATTGAAGATGTCTTGGGTCAGGAAGAGGAGAAGATACAGACTGACACATAGAGAGAAGAACAGCATGTGAAGATGGAGGCAAAGACTGGAGTTATGCAGCTGCAAGCCAAGTAATGCCAAAGACTGCCAGTGAACAACAGAAGCTAAGAGAAAGGTATAGAATGTAGTCCTCCCTGGAGCCATCAGAGACAGCATGGTCCTGCAGACATCCTGATTTTGGATATCTAGCTTCCAGAACTGTGAGAAAATAAATTTCTGCTCTTTTAAATCATCCAGCCTGGGGTACTTTATGAAAGCAGCCATAAGAAACTAATACAATATTCTCACCACCTTCAGTGGGAATAGGGAAAAGGAATATGGGGTGTTTGCTAAGGTCTAGTCGTGCATGGTGAAAGGCTCTTTTCAGAGTTCTGCTAGCAAATGTGAACAGATCATATTGAACAGTGTCATATTGAATAGATGATAGGCTTTGCAGGAAATGAGGCTGATTCTGATTTAGAGCAAGTTATTCTTCTCTGAGCCTCAGCTCTCTCATCTGCAAAATGGGCCAGATTGCTGTGGGGATAATACCAGCCTTCCCAATCTTTACTCATTGGAATCACCTAGGGCACTTGTCAAAAATATAGATTGCTGTTATAAATTAATTGGTATAAACTGATTGATTTCTAAATAAAATAGACCTTGCATTACAACTG TCONS_00119245 s 5' 0 TCONS_00119245 s 5' 0 EMBV3_35234 TCATTTATGTATTAATCAAGGCATTTTTTTTTTAAGCACACACCTCAGACAGTGTCAGCC Gene GeneID:515665|TMEM9B:NM_001034507:122_cdna Constitutive 2 NULL GeneID:515665 15 GENE TMEM9B MGC127949 TMEM9 domain family, member B EMBV3_27824 CTAAATGTCCCTGACAACTTTCACCACAGGGCTGGACTTAGTAACTGACCAACTTCGGGG Gene GeneID:100337258|LOC100337258:XM_002687180:59_cdna UTR3_Alt 2 NULL GeneID:100337258 5 GENE LOC100337258 NULL transmembrane and tetratricopeptide repeat containing 2-like EMBV3_42229 TAAACTCCGTGGCACGCTGGGTGCAGTGCCCACGTTGCTGCTGCGTAAGACTCTGTATTT Gene BVV0101_013082 + 0 NULL GK000013.2:59076380-59097200 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049308 1 XLOC_029439 NonCoding TCONS_00049308 XLOC_029439 NonCoding NonCoding - 13:59078593-59079797 - TSS36484 1204 2 TCONS_00049308_5 93 1 0 0 0 0 0 0 0 0 0 5.89793469182802e-05 0 1.90131585393724e-06 2.96983933515346e-06 0 0 0 0.0012065079002257 1.37892656480899e-05 0.000145877519248405 0 0 0 0.000462251275049104 0.000388601975286204 0.00391268565404094 0.000345272127853698 0 9.73281402594892e-06 0.00122058965221088 4.0320645775433e-05 0 XM_005214856.1 PMEPA1 PREDICTED: Bos taurus prostate transmembrane protein, androgen induced 1 (PMEPA1), transcript variant X1, mRNA. 0.0 2172 100.00 0.999169435215947 NM_199171.2 PMEPA1 Homo sapiens prostate transmembrane protein, androgen induced 1 (PMEPA1), transcript variant 4, mRNA. 3e-147 526 73.43 0.723421926910299 0 noncoding 0 0 0 0 -0.03649250453871 0.810361439627188 0.0444822240943522 0.477804171829435 CTTCCTCTTGAGCTAAAACTTGCATCTTGTTACTGGGGTTGTAGGGGGGAAGGTGTGGTCTGCATTTGCCAGATGGGCAACGAATTAGAAAAGGAAGCAGGGGCGGGGGTTACTGACCTCAGCTGGCTTGAGGGCAGAGCATCCTTTCCTTGTTGTGCCCCAGTATTGTAGTCCAGTCCTCGATGCCACAGTATCATGCCAGGGCTCCGTGCCCAGCAAATGACAGTTGCAGAAGTTCATGGTGGAGCAACTTGTCAGGGCCAGGGCACCTCCCAAGAAGACCATGGGTGCGTTTCTGCAGAGCTCTTGGTTTCCCTGCCGAACCCAGAGCCCTGAGGATACAGCCTTCCTCTGGGTGTTGGCTGTCATGCTCTTATTCTTGAAAGGCCTTTGAGCATCCCTTGGGAGGGCCCACTTTTCCAGGAGAAGGTTGAAGAGGAGGGGTCCTCGGCAGTGGCTGGTTGGAGGGGGACCAGGCTGCGCTCAGAGAAGGTGGCAGAGCTCAGCTTTTTCTACTCACGTTATTTCCCTGTATTTCCATCATCACATTTCCTCTGGAGGAAACGTTTCCCCCGCAAAGCCCAGGTCTACACAGACGGCCTTAGCAGAGTGCACTCAGAGCCGTCCGCGTCCTCACGTTTTTGCCAGGAGCTGAAAGCGACTCCCCTCCACGTCTAGCGAACACCGGGGCAGGCCAAGGACCGAACCCATTCCCCTCCTTGTCTGTCTGCTCTGTGAATTGTACGTTTCAGAGAATTTGTTTTTTTTTTCTACATGCAACACCAAGCTTCCAGATCCATAAAACATCCTGGTGATAAAGGAGAGAAAAATGTTCAGTTTGGTTTTCCGGAAACTGCGCTTCACATTTTGCTGTACTATAGAGCTCAGAAGGACCCGCTGCGCTCTCATTTGCCTGCCTGATTCCACGGTGGTTGTGCTGATGGCGACGCTTTTACGTTGCTCCCTTGGTGTTGGAACCGCTCTCTTTTGCAGCCCCGTTTCCCAAGTTCTGTTCAAGTTACATGTGTGTAAACTCCGTGGCACGCTGGGTGCAGTGCCCACGTTGCTGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGATGAAATCGCTTGTTGTGTATCAGTAATCATTAGTGGCAATGATGACATTCTGAAAAGCTGCAATACTTATACAATAAATTTTACAATTCTTTG TCONS_00043248 . 3' 2215 TCONS_00043248 . 3' 3418 EMBV3_37579 CCCCGGAGACATTCCTGAGAAGGGTCACAGAATCCCAGCCACCCAGGGACCAGGACTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34793 AGGATCCATTTGTGCCCCAGCAGCCCAGCATTTTCCAGAGCTTCCACTGTTGGCCAGACT Gene GeneID:524013|ETV3L:XM_002685963:4_cdna Constitutive 0 NULL GeneID:524013 3 GENE ETV3L NULL ets variant 3-like EMBV3_30743 AGTAGTGGAACGACATCCTCTCACCTTGGACTCTTCGGTCTCCCCCAGGGCTGATTCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41328 TGCCACTCAGCCAGGAGTCTCTCTGGAGACACCCTTTGCTTCTAGCCCAGTTCAGCTTCT Gene GeneID:614322|RUNDC3A:NM_001076322:284_cdna Constitutive 0 NULL GeneID:614322 19 GENE RUNDC3A MGC139845 RUN domain containing 3A EMBV3_42161 GTTTGAATCACAACTGCCAGCAACTGTCACACCAGACAATGGTGGGATGGCACTCTTTGG Gene BVT0102_002554 + 1 EMBV3_23384 GK000007.2:19353053-19374777 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31549 GTGTTACATCACCTGCCATTTCTGCCTGGTTTGCCTGGAACGCTATCTAAAGCATCCTGG Gene BVV0102_356939 - 1 EMBV3_02496 GK000030.2:91228024-91232234 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29930 GATCATGATGGGGATGGAGAAATAAACAAGGAAGAATTTTTGAAAATGATGCAAAAGACC Gene GeneID:505789|CETN4:NM_001038039:14_cdna Constitutive 1 NULL GeneID:505789 17 GENE CETN4 MGC133758 centrin 4 EMBV3_28333 GGCAAGATGAAGCAGAAAAGGAGAGACATGGATGTGGCAGTAACACTCCTCTCGCCCAGC Gene GeneID:504512|ETV6:NM_001015514:77_cdna Constitutive 0 NULL GeneID:504512 5 GENE ETV6 MGC143391 TEL ets variant 6 EMBV3_17508 TCCTGACAAGGTACACACGGTCCAAAGACACCCCATGGAGCAAACACCCTGTAGTCACAT Gene GeneID:506392|XPO4:NM_001098889:17_cdna Constitutive 1 NULL GeneID:506392 12 GENE XPO4 MGC157258 exportin 4 EMBV3_06497 ACAAGTCTTGATTCAAAATGACAGCCTTAAATCCTTTCGAGAGCAAGTTGGCGGGTCAAC Gene GeneID:510583|PAH:NM_001046058:983_cdna Constitutive 1 NULL GeneID:510583 5 GENE PAH MGC137073 phenylalanine hydroxylase EMBV3_03809 TCTGGGAGGCGAGGAAGCCTCGTTTGAAGTCCCGCGCCTGCCGCTCCAGCCAGAGCTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01255 AGGCCTTTGAGGCTGGAGCAGAGTTAAAAAGTGCTAGGAAGCCGAATCAGACAGTATGCC Gene BVV0102_015762 + 0 NULL GK000003.2:87804654-87841041 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14620 TAAGGAGCATCATGTATGGGGCAGGCTTTATCTGCCCACAGTGCCTTGTACTTATCAGCC Gene GeneID:100300196|LOC100300196:XM_002698020:205_cdna Constitutive 0 NULL GeneID:100300196 25 GENE LOC100300196 NULL hypothetical protein LOC100300196 EMBV3_34246 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41748 ATTGGGAGGCGGGTTCTTTACCGCTGAGCCACTGGGGTAGCCTGATGATATGTAAGATAT Gene GeneID:507986|MOCS2:NM_001014867:64_cdna UTR3_Alt 5 NULL GeneID:507986 20 GENE MOCS2 NULL molybdenum cofactor synthesis 2 EMBV3_06868 ATTATCTGGCTTGGGTACACTCCTTGTGAATAGAGTAAAGCTCAGTTGTGCAGAGAGGGG Gene BVV0102_275904 + 0 NULL GK000007.2:53437237-53447568 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00953 AATACGGGCTGCAGGCGTACACCGAAGTGAAGACCGTCACAGTCAGAGTTCCTCAGAAGA Gene GeneID:508629|ALDH2:NM_001075367:99_cdna Constitutive 0 NULL GeneID:508629 17 GENE ALDH2 MGC138997 aldehyde dehydrogenase 2 family (mitochondrial) EMBV3_21397 TATGGACCAAATCATGTTTCCCGACCACAGTGCAAAGTACAGCAGGCAGAGTCAGAGCCG Gene GeneID:100139484|RAPGEF2:XM_002694421:41_cdna UTR3_Alt 2 NULL GeneID:100139484 17 GENE RAPGEF2 NULL Rap guanine nucleotide exchange factor (GEF) 2 EMBV3_10822 ATCAACCATGTCAGATAAAGAAAATCTTTACATCTGTGGATTGATTCAAAAACCTAATGA Gene GeneID:615777|ANKS1B:NM_001102291:73_cdna Constitutive 0 NULL GeneID:615777 5 GENE ANKS1B MGC151558 ankyrin repeat and sterile alpha motif domain containing 1B EMBV3_06179 CGGGCTCCCGCGTTTGCACGATGAATTATTTCTGTTTCTTGCTGCGGAACATTAGTGCAG Gene GeneID:510657|GPR45:XM_002691187:98_cdna Constitutive 0 NULL GeneID:510657 11 GENE GPR45 NULL G protein-coupled receptor 45 EMBV3_40996 GAAAATGTTCGTGCAAAGTGGTACCCTGAAGTGCGACACCATTGTCCCAACACACCCATC Gene GeneID:281440|RAC1:NM_174163:47_cdna Constitutive 0 NULL GeneID:281440 25 GENE RAC1 NULL ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) EMBV3_36489 CTGGTGGCTGGCACGGCCCTGGGAACCGTCATGGTAGTGGGCGATGTGTTTGAACGTGAT Gene GeneID:505636|MBLAC1:NM_001075212:86_cdna Constitutive 0 NULL GeneID:505636 25 GENE MBLAC1 NULL metallo-beta-lactamase domain containing 1 EMBV3_23186 CTTCTCCTGGGAAAGGTTGAGGTCAAGAGAAGGCGGCTTTCAAAGGATGAGATGGTTGGA Gene BVV0102_383818 + 0 NULL GK000002.2:111578409-111598715 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21074 CACATGCTTGCAAGGTAATGCTCAAAATCCTCCAAACTGGGCTTCAACAGTACATGAACC Gene BVV0101_025860 + 0 NULL GK000005.2:99153975-99192314 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166025 1 XLOC_100865 Coding TCONS_00166025 XLOC_100865 Coding Coding - 29:5069177-5072550 - TSS124003 3373 2 TCONS_00166025_3 114 0.610139341832197 1 0 0 0 0 0 0 0 0 0 5.84800848087031e-07 5.68964885227637e-05 1.35735858742555e-06 5.43737542408181e-05 0 0 2.08162213481244e-05 0.000203587463445212 8.36759116332456e-05 0.000126458860798526 2.12598715150667e-06 0 0 0.000409204621101182 0.000145511949678152 6.51655241425539e-05 0 2.7850449079901e-06 7.96159349117186e-07 5.69533710662788e-06 1.65514358282402e-05 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1817 85.05 0.470797509635339 TCONS_00166025_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 9e-08 50.8 27.72 0.868421052631579 0 coding CAGAGATCAGTGCAAAGAAACAGAGGAAAACAATAGAATGGGAAAGATTAGCGATCTCTTCAAGAAAATTAGGGATACCAACTGAACATTTCATGCAAAGATGGGCTCATTAAAGGACAAATGGTATGGACCTAACAAACAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTATATGAAAAAGATCTTAATGACCCAAATCACACCCATGGTGTGATCACTCACCTAGAGCCAGACATCCCAGAATGTGAAGTCAAGTGGGCCTTAGGAAGCATCATGATGAACAAAGCTAGTGGAGGTGATAGAATTCCAGTTGAGCTATTTCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGCAGTGGCCAAAGGACTGGAAAAAATCAGTTTTCATTTCAATCCCAAAGAAAGGCAATGCCAAAGAACGCTCAAACTACCGCACAATTGCACTCATCTCACATGCTACCAAAGTAATGCTCAAAATCCTCCAAGCTAGGCTTCAACAGTACATGAACCGTAAACTTCCAGGTGTTCAAGCTGGATTTAGAAAAGGCAGAGGAAGCAGAGATCAAATTGCCAACATCTGTTGAATCATCGAAAAAGCAAAGAGAGTTCCAGAAAATCATCTGTTTCTGCTTCATTGACTATGCCAAAGCCTTTGACTGTGTGGATCACAATGAACTGTGGAAAATTCTTCAAGAGGTAGAATACCAGACTACCTTATCTCTCTCTTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGTTAGAACTGGACATGGAAGAACAGACTGGTTCCACATTGGGAAAGTACTACGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTAAATGCAGAATACATCATGCGAGATGCCAGGCTGGATGAAACACAAACTGGAATAAAGATTGCCAGTAGCAATATCAATAACCTTATATATGCAGATAATACCACCTTTATGGCAGAAAGTGAAGAACTAAAGAGACTCTTAACGAAAGTGAAAAAGAAAAGTGAAAAAGTTGGCTTAAAACTCAACATTTAGAAACCTAAGATCATGGCATCTTGTCCCATCACTTCATGGCTAGTGGATGGGGAAACAGTGGAAACAGTTACAGACATTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTAGCCATGAAATATTTAAAAGACGCTTGCTCCTTGGAAGAAAAGTTATGACCAAACTAGAGAGCATACTAAAAAGCAGAGACATTATTTTGCCAAGAAAGGTCCGTCTAGTCAAAACTATGGTTTTTCCAGTAGTCACGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAAGAATTGATTCTTTTGAACTGTGGTGTTAGAGAAGACTCCTGAGAGTCTCTTGGACTGCAAGGAGATCTAACCAGTCCATCCTAAAGGAAATTAGTCCTTTTTGTTCATTGGAAGGACTGATGCTGAAGCTGAAACTTCTTTGGAAAATACTTTGAAACTTCTTTGAAAATACTTTGGCCACCTGATGCGAAGAAGTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTGGGAGGAGAAGGGGGCGACAGAGGATCAGATGGTTGGATGGCATCACCAACTCGATGGACATGAGTTTGAGAAAGCTCCAGAAGTTAGTGATGGACAGAGAGGCCTGGCGTGCTGCAGTCCATGGGGTCGCAAAGAGTCAGACCTGACTGAGTGACTAAACTGTAATGGGATGAAAGAAACCATAAGTTAAAAAGAATTATTAGTGCATTAGGCAAATAAATTCACTCATTTCAGTCATGTAAAGCTAAGATTCTTTGTGAAAAGAGTGCCTGTCTCATCAAATACAGGGAGAAACACTTAAACCTGAGCTTTAGTGTTTTAATGAATCAAGGACCACATGTAAAATTATTGTGTTATAAATTATAGGTCGCTTCTTCCAAACAGAGATCTGTTGCCATGCATGCGTGATCTTTTGTATATTACTATGCTTTGTCAGGTCATCTTAAGGCTAGGTGTCTTAATATTTCTTTCTCCCAAGGAATTGTTCTGTGTTGGTAGTTAATGAAATTTGTAGATTTTATTAAAATTTTTGATAAGATACAAAAGTTTGTGACCACCTTTAAGTATTGTAGCCATTCCTTTGCTTATTTTATTTCATTTAAGGAGGCATTTTTTTAGCCACTTCTTATGTGCTGGGGATAATTGACTAAACACGTGGGCCTCTGCTTCCAGAGAAATTTCCATCAAGGAAAGCAAACGGTCATCAAATAAAAACTATGCTAAAGATAATACTGTAAAGAGTGCTTGTGAGAGCATATTTGGTAGATTTTATACATAGATTTTTGGGGGGGCAGACACCAGCGTCCTGAAAAAATGGGCAGGATTTAACCAAATAGAAGAGGGAGGAGAAAGAGATGAAAAGACCTGGAATTGAGGGATAACGATGGTCTCAAGAAAACTCTTGTTAGTCTGCTGAGCCCTCAAGTTTTCTGTCTTGTCCTCACCCCTGAGCAAACATCCCAGCCTTTGGTTTTAGGTTACTCTAGATTCTAGTACATTGTGGTGGTACTAGAATACGATCATTAGAAGCTCTGCTGATGTTCCCTTGTAAAGTGCTTTAATCTAGGCCAAATCTGATCATTAGCTCATAACTAGAATTGGCAAATGCCCCCAGGGAAGTAATCAGTAGTTGTCAGCAGTACTTGGAGAGTTTTAGTATTGAATACATTTAGTCTTCACTGCTTCCACAGCATTTTGATATTTCTAAAAACGTGCATTCAATGAATTTTTTTCTAGTTGTTCGAACTGCAGTGATTGCCTACCAATACCTACTACCTATATCATTCCTGGGAGTGTGGAAGTCCATATTGAAAGGTTTGCTGAGTGCAGCATGATCACATTTAGGAAGTTCACTTGGGCTGAAGTTACTGTAATTGTAGTACAATAGGGGAAAGGAAGTGGGTGATTTGAAAGGAAGTTGTTACATCATTTAAGGGAAAGATATTGTTGGCCTGAATTCAGAATAACTGCCCTTGGTATTGACAGAAGTGGATGAATATAGGAGTTACTGAAATGAGAGGAAACAGAGCAGATGACGCACTCACATTAAAAAGCAACGACAGCACAATGATTAAAATCTATTATAGTACTGTAATTATTTCTGACGTTATTGTTTTACTAAACCCATTTCTATACTTTGAAAGTTGACTAGAGGAGAAATAATTGTTTTCTTGTATCTCATTTCCATGTATAAACTTGAAAGTTTGAAAGTCAATTGATAGTTTTAAAATTCTGAGCTAATAAACACCAAAATAGCCCA TCONS_00164399 TCONS_00164404 TCONS_00164405 TCONS_00164406 TCONS_00164407 TCONS_00164398 TCONS_00164400 TCONS_00164401 TCONS_00164402 TCONS_00164403 . 3' 8726 TCONS_00164399 TCONS_00164404 TCONS_00164405 TCONS_00164406 TCONS_00164407 TCONS_00164398 TCONS_00164400 TCONS_00164401 TCONS_00164402 TCONS_00164403 . 3' 12098 EMBV3_12710 CACTGCTCATTTTAGAGAGCATCATGATAGAGATGCCATTATGAATCTAAAGTAGTGCTG Gene BVT0102_075720 + 0 NULL GK000009.2:34313247-34316832 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236972 TCONS_00236977 TCONS_00236971 TCONS_00236976 TCONS_00236979 TCONS_00236973 TCONS_00236975 TCONS_00236974 TCONS_00236978 TCONS_00236970 1 XLOC_144623 Coding TCONS_00236973 XLOC_144623 Coding Coding KPNA5 9:34313325-34329226 j TSS177275 4621 1 TCONS_00236973_1 233 7 0.709811320754717 6.0616127375163e-05 4.16089256853664e-19 0.000291808841996817 2.39723933704262e-05 0.000353308047378425 7.88151553783125e-05 0.000297691175982792 0.00023691751513268 0.000700172188441517 7.18022849206678e-08 6.69216611516609e-06 3.68889360000448e-28 7.33970277065637e-05 2.06614622083706e-05 3.27759292203764e-06 7.10901906077012e-51 9.0540268837556e-128 3.60970743616718e-08 0.000359155854366056 0.000379063394613386 2.71216059040336e-45 8.90050488812906e-09 0.000549103047293662 4.83212724365523e-43 0.000536491292017064 8.63663783486362e-10 0.000256005892056508 1.00228208443048e-05 3.4780978234935e-20 5.32837281091661e-05 XM_001252155.4 KPNA5 PREDICTED: Bos taurus karyopherin alpha 5 (importin alpha 6) (KPNA5), transcript variant X1, mRNA. 0.0 1755 100.00 0.210344081367669 NM_002269.2 KPNA5 Homo sapiens karyopherin alpha 5 (importin alpha 6) (KPNA5), mRNA. 0.0 1375 93.63 0.195845055182861 TCONS_00236973_1 sp|O35345|IMA7_MOUSE IMA7_MOUSE Importin subunit alpha-7; 5e-161 461 93.99 0.995708154506438 4 coding 0 0 0 0 -0.0428565526083712 0.714434003268369 0.000471198293830966 0.991784049683166 ATATAGGCTCATCGTCTTATGAGCTTCACTATAGACTAATTGGGTAGCAAAACCATGTTTTCTTTGAGGAACTCCAAACTTCAGTATGTTTTCTGAAACCGTTTTGTTTCTCTAGGAACAGATTTTCTACTCTCCTGTTGGAAGGTTTCACCTTGCTTAAATGTCCTGTCACGATTGTTATTTAGCAGTGACCCAGATGTATTAGCAGATGTGTGTTGGGCCCTTTCTTATCTTTCTGATGGATCCAATGATAAAATTCAAGCAGTCATTGATTCTGGAGTCTGTCGAAGATTGGTGGAACTTTTGATGCACAATGATTATAAAGTTGTATCACCTGCGTTAAGAGCAGTTGGTAATATTGTGACTGGTGATGATATTCAAACACAGGTAATTTTAAATTGCTCTGCTTTACCCTGTCTTTTACACTTATTGAGTAGCTCAAAGGAGTCAATCAGAAAAGAAGCCTGCTGGACTGTTTCAAACATCACTGCTGGAAACAGAGCTCAGATTCAGGCTGTTATAGATGCAAATATTTTTCCTGTTTTAATTGAGATTCTTCAGAAAGCAGAGTTTCGCACCAGGAAAGAAGCAGCTTGGGCTATAACTAATGCAACATCAGGAGGCACTCCAGAACAGATCAGGTATTTGGTAGCCTTAGGCTGCATTAAACCACTTTGTGATCTGTTGACTGTTATGGACTCAAAAATAGTTCAAGTGGCTTTAAATGGACTTGAAAATATTTTACGGCTTGGAGAACAAGAATCTAAGCAGAATGGAATAGGCATTAATCCATACTGTGCCCTCATTGAAGAAGCATATGGTCTAGATAAAATTGAATTTCTGCAAAGCCATGAAAATCAGGAAATTTACCAAAAGGCTTTTGATCTGATTGAACATTACTTTGGTGTAGAAGATGACGACCCCAGTATTGTACCCCAAGTGGATGAAAATCAGCAACAGTTTGTATTTCAGCAGCAGGAAGCACCAATGGAAGGGTTCCAGCTTTAACTTGGTAGGAGGTAAATTAATGGCTAAGAAGGGTAGCTTTATATACCTCCCCTTTCTTGCATTGTCAGTAGGAATATTTGATGTGTTTTTGTGTAGAACAAAAAAAGAAAGAAGATGCACTTTTAGAAAGCAAAACAAGTTTCCATTCATATGCAACCTTTTATTATAGTTTTGTTGTTATGTTGGTGTGCCTGTATATATGTCTTTCATTGTTTTATCTTTTTTTGTATCTATTTGAGAACAGTTAAATACACTATTTAATAATTTAAGGCTGAGAAGGAGAATTTTGCTAAAGTATTACAATAATGGTTCTGAATTTTTCTAGCACTTGTGGAAACTGCACATCAACAGCACAGCTGTCGATAATTGCATTTTGGCAGTGTCTGACATTCCCGCTCTCTACTAAATCTACCTCTCAAAGCAAAAGCAAAACAAAAAAGCTTCAGAAGCATGAAATAGAGAAAAGGCTAAATTAGAATGTAAAGACAGATGTTACCAGAAATTATAAATCACTGTGCTGTAGGTTATACTTTGCAAAAAAATAAAAAGGTTTAACAAAACCAGTAAGAGTTACTTATAAAACATAGGAAAAATATTGTACTGATAATCAATTAAAATGTAGCAATTGTGAAGAGAGAAGCTGTTCTTCATATTGAACATATTAAAATAATTACACAACATTTAAATATTTGTGTTTTTAACATATAAATGCTATATTTTATATTTTGACCAAATATGCTAACATTTTTGAAATAGTTTTTTTTTTTATTTTTCACTGCTCATTTTAGAGAGCATCATGATAGAGATGCCATTATGAATCTAAAGTAGTGCTGCATAGCAAAAATAATACTGTATTCCTTTCTCTGATTTTTCAGAGCAGTAATTGAAAAGTTTCACTTTCTGTGTAATAATGAACTTAGGTATTTGAATGGCAAAATTGTCCTGAAGAAATCACCTTGTTATGTATTAAATTTTATTAAATGTACTTAATGTTTGGACACAAAAGGATGATATTAATGAAAATTACTAAGGATTCTTTAATTGGTTGAAACCTATATTAGGATTTTTTTTTCCCTTTGGTAATACTCAGAGGGTCATACTGCTGCTTGTCAATGTACCATTGTATTAGATTACATTTGTATCAGATTGGTTAATATAATGTAAGTGTTTATGTATTAACAGCAAAAACCTCTTCATATTGTGAAACTTTAAAAAAAATTTCAATAGAAAATTATATATATATTTATTTATAGATCCATATATATGCATGTGTCTTATGTGTTTTTTTTCACGGTACTATATTCGGTAGTTTTCTAAGCAGATATGGTACTGTTGAGCTCAGTCTTTTCATTTATAGTTATATACAGGCTATTTACATTTCCAGTTATATATCTAAAATACTTATTTAAAAATTAGTTTATTGCTGTTTTAAGATAGAAACTAAAAGCATTTTTGATATGACTCATAGTCTATTCTGTAAAGAAAGATTTCATTTATGGTATCATTTATAATGTTTCTGCTGGAAATCAGAGGCATGTTAACAAGAAGAAAATGTATACAGAGGTACTTTTAAATAGTATGACACTTTGTAAAATTATATATCATGAAACTAAGCTTTTGGCAAGACACTTAAAACCTACAGGCTATAGACTACAGGTTTAAATGGTGTCTGTAATGCTGACTGCATCTGCCAAACCTCTTTATATTGTTAAGTAGAGTATTGTATCTGTGCCCTTTTTATTGTAGTAGAAGTTATGAAGTTCAGTATATGTATATTCAAAAGAACAGGGTAGTTATATTAAAGATTACCAAACTGATGGTGAATTTATCAGATCAACACTTTTTTGTGATGCTGATAGTCTAAGTATCAGGTGACAGGGTATTCCACTCTTTCTAATCAATTGAACTTGATAATGCAGCATAATTCATAAACTAACCAGCTGTGCCTGCTTTTATTTTGAGGACCCTGTAGTCAGTTTAGGAGGTTTAGGTTAATAAATCTCTAAGCCACGTCTTTCAAACAAAATAGTTCTTACAGAAGGAAAAATAATGGAAATAATAGAATGGCCTTTAATTTTAAATTTTTGCCAGTAAAGCAAGCATTATACCTCTAAGTATAGAATTTGACCATATTTTAGGCATTTATATACAAAAATTTAATTCATTGGATCTGTTACTAGGATAATTGATTTGATTAGATTTGAATGCAAGGGGCAATATATAATTAATTGTTGGGATCAGCTATTGGTGTGGTAATAACTTTATTGAACCAATACTAGCAAATACTTTGTTTCTAAAATTTTTCTTAATATGACTACTCTTTTCAAATGTACTATTTTAAATGCTCCAAAATGTATTTTCCTTAATCTTCATTGGCCCTTGTGGGAAATTTTTTTCTTTTTTCAACTTGCTTTCCTAAGATTTATTATATTTAAATCCGAGAGAAACTGTGCCAAAAAAAAGAAAAGAAAACATGTTCTAAAGGGCAATGCATGCAACATTAATGCAGAAATAAAAAAAAAATACTTGAAAGAGTCCTTTACGTTTAATTAAATTTGGTGTTTTAGTTTTGTCTGAATTTGAATTTTTACTAGCTAACCTATGCAATTATGCTTACTTGTTTTATATTTGTAAGTACTTGACTCAATGACCTGGGTGTTTTTACTATCAGTTTTATTTTGAAAACTGTTTTTAGAATTTAATTTTTAGTGTCGTTTTGTTCACTTAATGGTAGCACTAGAACAGGAAAGCAAAAAATAAAAACAAAAAAAAATGTAATAAAATCTGCTGGCACAGAAACAGCATATCATTCGGTAACTGTAAAACCTATTTGCAGATAAAGATTGATTTGTTGATAAAGGACTTTTGTTGGACAAAACATTACCTTTGCCTTCATATTTTTTCTTCTCTTAAGAAGGAGCATTATGGAAAAAGTAATTACAATACAAAGTCTTAGTGGATTTTTGTTGCTGTTCTAAATTCAGCAGTCTACTTGCTGCTTTGTGAAACTGTGAAATCAAAGTAATTGTTAACCTTTACTCATTTTAGTTCATAGCATTACTGTTTTATAGAATGTAACATATTAGGAGCCCATATGATAGAGCTCTAGAAGGATAATGTGTCTTTAAGTTGGGAAGTGGGATGGGGAAGATGTTCTTGACTAACTAAAAAAACAACAACATTTGAGTAATATGCAATATTATGAAATGTTACAGCACTATATTAAAAACAATAAAATCCTATTTTACAATTGCATTTATATAAGTGTGTCTGTTTCATTTGTTCTCACTTAGGATTGTGTATTCCTAACAGCAAAAATAGATGCCCTCAATGATTAAAATTCCATCCCCTTTCTAGAACCAGTACGATTTCGTTGGTAGGACTATCTGATAAAGTAGTATGTTGCTTTTATTTTAGAACATATATTCAACTGTAATGGAGGATGTATCTAATTTATGTTTGTATCTCATGCCTTGGCAATTAATGGAACATTCACATGTTCAGCTGAGATTATTTTTCCTTTTCTATTATTTTAATGCAATACAGTGCATTTATTTAAGGCTTAGAGTTTTGGAAATAGAAGGGAATATCTGATTTAACTTTCTTAGTGTGC EMBV3_35665 CTGGCAGTAGGCATTTGGGTTGCTTCCACTCTTTACTTTTGTAAATTATGCTGCTGTGCA Gene BVV0102_192375 + 0 NULL GK000016.2:1459011-1668261 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36842 GCATTTTGCAATAAATCACAGGGGGATGTGCTGTTCAGAGTCCTGTCTCAAAGGGCCACC Gene BVV0102_376051 + 0 NULL GK000007.2:21272003-21289455 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29847 AGGGCGACTGGGCGCGCCTCCTCGAGCAGATGGGTGCGCTGGCCGTGCGGGGCAGCCTGC Gene GeneID:615651|ZBED3:XM_002690439:183_cdna Constitutive 0 NULL GeneID:615651 10 GENE ZBED3 NULL zinc finger, BED-type containing 3 EMBV3_03179 CCCTGCAGGACTTCACCATTAAGGAGAAAGATTTGGAACTCTCAGACACTGAGGAAGCCC Gene GeneID:407112|SLC9A3:XM_002696453:56_cdna Constitutive 0 NULL GeneID:407112 20 GENE SLC9A3 NULL solute carrier family 9 (sodium/hydrogen exchanger), member 3 EMBV3_02398 CCCAGCTGCTCAGGGCTGTTCCCAGGGCAGATGCAGTGTAGAAATGTGCTCAAGATTCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42638 TTGGAGAACCCAGACAGGCATCAGGAACAAACACTCCAAGAAGGCAGACAGCAGGAACTT Gene BVT0102_017790 + 0 NULL GK000014.2:1772414-1782900 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23234 CCAGGACAGAGCATTTGTGTCATCGATGAGGTGGAAGAGATCAGAACCCGAAAGGACGTG Variant GeneID:521103|C28H1orf57:NM_001075816:84_cdna 466^585 5 EMBV3_28129 GeneID:521103 28 GENE C28H1orf57 C1orf57 MGC140669 chromosome 1 open reading frame 57 ortholog EMBV3_09289 GTATACTGGCCCTAGAGATGCACCAGCGCTTTGTGACCTGCCCCTGGTGTCTTATTTATT Gene GeneID:100297183|LOC100297183:XM_002699422:89_cdna Constitutive 0 NULL GeneID:100297183 29 GENE LOC100297183 NULL hypothetical protein LOC100297183 EMBV3_05380 ACCAGAATAATGAGAGTGAACTGTGGCCTTAAAGAGATATTGTCTGGCAGCATCTTGCCC Gene BVV0102_311485 + 1 EMBV3_37139 GK000005.2:74881405-74920046 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01670 GTTCACAGCTCGAAAGGGACGGATACGTGCTGGCCGACTCGCGCTTTCTCTTTCACAGGT Gene GeneID:520178|PTPN21:XM_002691087:205_cdna Constitutive 0 NULL GeneID:520178 10 GENE PTPN21 NULL protein tyrosine phosphatase, non-receptor type 21 EMBV3_14154 TAACCATCAGCCTTGTTCAAAACTTTTTAGAAAGTGATCGGTTGGTACAGATTCCGGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18755 CCCTTGAGTCTTACTTGGGTTAGCAGACAAGAAGTAGCTGGAGGCTCGGGGAATTAAGCT Gene GeneID:533343|KCNJ10:NM_001081601:308_cdna Constitutive 1 NULL GeneID:533343 3 GENE KCNJ10 MGC152173 potassium inwardly-rectifying channel, subfamily J, member 10 EMBV3_01096 CAACACCAACCATGGGCATATTCTGGTGGAGCCGCCCGGGAGCGCATGTTTACTGGTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26161 GAGCCGTCATTCCTGGGTCAACACCACAACGCCCTGTGTGAGTGGGTGTTCGTCATTGAC Variant GeneID:515742|TMEM150A:XM_002691366:221_cdna 525^804 7 EMBV3_23058 GeneID:515742 11 GENE TMEM150A TMEM150 transmembrane protein 150A EMBV3_16256 CAAGCCCCATTTGCTGTTGTTAAATTGCTAAGTCGTGTCCCACTCTCTGTGACCCCACAG Gene BVV0102_321330 - 1 EMBV3_36318 GK000013.2:66853782-66863224 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23329 CTTAGGATTCACTTAGGTGCTGGTGCTGGCCCACTAATCTCTCTTAGACCTAGAAGTATC Gene GeneID:540709|RAB11FIP2:XM_002698519:130_cdna Constitutive 0 NULL GeneID:540709 26 GENE RAB11FIP2 NULL RAB11 family interacting protein 2 (class I) EMBV3_08882 TTTCAAAGGTTGACTGTGATGCAGACAGGGATGCTGGTGAGTGTGGTGCTGGTTGCAGTG Gene BVT0102_191444 - 0 NULL GK000011.2:12387042-12894975 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024100 TCONS_00026953 2 XLOC_014438 XLOC_015153 NonCoding TCONS_00024100 XLOC_014438 NonCoding NonCoding - 11:12875839-12880002 - TSS17766 1263 1 TCONS_00024100_5 203 2 0.69702066314272 0.00309251059472127 0.00147185976591583 0.00318477983753616 0.000398810116644007 0.000485851024633588 0.000634410771628435 0.000347765184528532 0.00169837144405425 0.00191162415377301 0 0 0 2.97636245939283e-05 0.000137805473266835 0.000761846840427253 0 0 0 0.000309333618351902 0.00191730505255878 1.87618027419274e-05 0 0 0 0.00098620277494587 0.00116322968164947 0.00432563735954334 0 0 0 0 noncoding 1 1 1 1 -0.215895247190494 0.19667045750073 0.0268845797520201 0.859296463937867 CCAAGCCATGCGAGGCAGGAAGTGCAGGCCCGGGGGCCTGCCTGGCCTGGCTAAGAAGGAGGAGTGCCTAAGGAGCAGGGGCCAAGGGCGTCCACAACTGCAGTCCTGACTCACCCTCCCTGGCCCCACCTCTTCCTCCAGACCCTAAACCGCTTGGATTCTTAAGTGGTTGGGACTCAGCACCGTCCACTCGTCTCTGCAGACTCAGCTCTGGGCCGAGGGCTGGGGGCTGCAGAGGCGGTTAGGGATGAAGACCAGGACTCAGCTCAGCTAAGACCAAGGTGTTTCCAAGGACTGGAGATGAGAGGGCGGGGTCTTACCAAACAGAAAGGGACGTTTCACCAAGTGGCTCCCATAAAAGCAGGCGGGCAACTGAGTGGAGTCACTGGGCACAGAGGACATCAGGCTCCACATTCACGGCCCCATCGCCACCACCACACCGCCTCTGTCAGCACTGCAACCAGCACCACACTCACCAGCATCCCTGTCTGCATCACAGTCAACCTTTGAAATGTGGCTCATTGGCCCTCAATGCTCTTGAGAACTTCCCCTCGACTGACGCCACCTCATTCCTGTCAGCTGCCGCTGGGCCCAGCCTCCTGCTCCCAGTCCAGCAGCCTCTGGCTTCCTCGAGCACAGTCTACATGTAACACATGCTCCCACCTCTCACCCCACCCCTGTCAGGGCCCCTGGACACAGATCCTCAGACCCCAGAGGGACTCAGGAGAGGGTCAGGTGATGTGGATCCCCAGGGTCCATACCAAACAGACATGGCCTTAGCATTGACCTTTCTGAAGCCTCTCCATCCCTCAAATCTGGATTTACCTGTCACCTGGACCAAGGAATGTCCCGTGGAGAACATCCAGATAACTGGCTCAGGACCCCAGTGGTCTGGCCCCCTCCCTCCTACATTCCTGGTGGAAGAGTCTACTTGTCTCCCCACTGAGAGGGTCCTCCAGGATCCCAGAGACCCCGCTGAGAACTCAGAGTTTCATGCCCCAGCCACACAGAAGCCTGGGATTCTGTGTGCTGAGAAGACCGTGAGAACTTCCCAAGTCCCGGCTGCCTCTGGTCCAGGTGCCCTTGCCATTCCAAAGGAGGAAGCAAGAGGCAAGCCAGCATCCCAGCCCCAGGCTCTCCATGCAGGGAGTGGTCTCCAGGGCAGAGTGTCGACTTCACATGGAAGGGACAGATTCCAGGGCTCACCTTCTCTGCCGTTTGTCTCTGCTCAGGGGGCCTGCTTACTCCTCAGAGGACCAGGGG TCONS_00026959 TCONS_00026960 TCONS_00026961 r 3' 14974 TCONS_00026959 TCONS_00026960 TCONS_00026961 r 3' 19136 EMBV3_24279 TCTAGCCCTCCTTAGCAAGGACCACTTCTGCCTGTGCTTCCTGGAGATGGAGGAGGGCAT Gene GeneID:514669|WDR8:XM_002694120:460_cdna Constitutive 0 NULL GeneID:514669 16 GENE WDR8 NULL WD repeat domain 8 EMBV3_21729 CTAGAAAGGATTAAGAAAGCTGTTTAAGAAGGCCATGACTCAGTCCTTAGCTGTGTACAC Gene BVV0102_294499 + 0 NULL GK000009.2:75254524-75262827 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237725 TCONS_00237727 TCONS_00237729 TCONS_00237730 TCONS_00237726 TCONS_00237728 1 XLOC_144800 Coding TCONS_00237725 XLOC_144800 Coding Coding BCLAF1 9:75257812-75290935 j TSS177657 8184 1 TCONS_00237725_6 870 0.0758797653958944 12 0.753275768371475 4.34902157343027e-33 1.90140646208139e-05 4.53559376352933e-10 2.93348618626732e-39 9.88642966673874e-14 7.28562996379169e-23 4.39031496975352e-06 0.000155557031309945 2.32624234682197e-31 0.000359786606973373 0.000155297921557768 0.000125551583153508 7.07922505392412e-07 1.14738663086058e-06 1.15057744639985e-11 0.00445062213833921 0.0021781213118969 0.00319979932607222 1.65730556397882e-07 7.16906690262812e-05 5.65007076015091e-08 0.00274556884571305 0.00172249115449028 0.00473843614868031 2.07435770936378e-05 2.59231595485887e-15 5.66489353548074e-09 0.000423488840809061 0.000125677473477198 0.000703798893299803 XM_005210976.1 BCLAF1 PREDICTED: Bos taurus BCL2-associated transcription factor 1 (BCLAF1), transcript variant X3, mRNA. 0.0 9575 100.00 0.648582600195503 NM_001077440.1 BCLAF1 Homo sapiens BCL2-associated transcription factor 1 (BCLAF1), 0.0 6414 86.78 0.651026392961877 TCONS_00237725_6 sp|Q9NYF8|BCLF1_HUMAN BCLF1_HUMAN Bcl-2-associated transcription factor 1; 0.0 1247 92.49 0.937931034482759 1 coding 0 0 0 0 -0.00533936473956737 0.97096778871173 0.00416792518569721 0.928737040435191 TTCTTTCCGGCCTGAGAGGCTTGGACAAAATAACTAACCTGCAACAAAGTGCTTTGGGAATTTAATGTCTCAGAGCATTCTCTCCAGGAAGAATCTTACAGTATCTCAAAGACTTCAGTTGACTGCTTGATCCTGCATAAAACCCAAGGAGAAAAGAAATGGGTCGCTCCAATTCTAGATCACATTCTTCAAGATCAAAGTCTAGATCACAGTCTAGTTCTCGATCAAGATCAAGATCACACTCAAGGAAGAAGAGATACAGGTCTCGTTCCAGGACGTATTCAAGATCTCGTAGTAGAGATCGAATTTATTCTAGAGATTATCGTCGAGATTACAGAAATAATAGAGGAATGAGACGACCTTATGGATACAGAGGAAGGGGTAGAGGGTATTATCAAGGAGGAGGAGGTAGATACCATCGAGGTGGTTATAGACCTGTTTGGAATAGAAGACACTCTAGGAGTCCTCGACGAGGTCGTTCACGTTCTAGGAGTCCAAAAAGAAGATCCGTTTCTTCTCAAAGATCCCGAAGCAGATCTCGCCGATCATATAGATCCTCTAGGTCTCCAAGATCATCCTCTTCTCGTTCTTCGTCCCCTTATAGCAAGTCTCCTGTCTCTAAAAGACGAGGGTCTCAGGAAAAACAAACCAAAAAAGCTGAAGGGGAACCTCAAGAAGAGAGTCCTTTGAAAAATAAATCACAGGAGGAACCGAAAGATACGTTTGAACACGACCCGTCTGAATCTATTGATGAGTTTAATAAATCATCGGCCACATCTGGTGATATTTGGCCTGGCCTTTCAGCTTATGATAATAGCCCCAGATCGCCCCATAGTCCTTCACCAATTGCTACACCACCTAGTCAGAGTTCATCTTGCTCTGATGCCCCCATGCTCAGTACAGTACACTCTGCAAAAAACACACCCTCTCAGCATTCACATTCCATTCAGCATAGTCCTGAAAGATCTGGGTCTGGTTCTGTTGGAAATGGATCAAGTAGATACAGCCCTTCTCAGAATAGTCCAATTCATCATATCCCTTCACGAAGAAGCCCTGCAAAGACAATCACACCACAGAACGCTCCAAGAGATGAGGCTAGGGGACGTTCCTCATTTTATCCTGATGGTGGAGATCAGGAAACTGCAAAGACAGGAAAATTCTTAAAAAGGTTCACAGATGAAGAGTCTAGAGTATTCCTGCTTGATAGGGGTAATACCAGGGATAAAGAGGCTCCAAAGGAGAAAGGATCAGAGAAAGGGAGGGCAGAGGGAGAATGGGAAGATCAGGAAGTTCTAGATTACTTCAGTGATAAGGAATCTGGAAAACAAAAGTTTAATGATTCAGAAGGGGATGACACAGAGGAGACAGAGGATTATAGACAGTTCAGGAAGTCAGTTCTTGCAGATCAGGGTAAAAATTTTGCTACTACGTCTCATCGGAATACTGAGGAGGAAGGACCCAAGTACAAGTCCAAAGTTTCATTGAAAGGCAATAGAGAAAGTGATGGATTTAGAGAAGAAAAAAATTACAAACTTAAAGAGACTGGATATGTAGTAGAAAGGCCTAGCACTGCAAAAGATAAGCACAAGGAAGACGACAAAAATTCTGAGAGAATAACAGTAAAGAAAGAAACTCAGTCACCTGAGCAGGTAAAGTCTGAAAAGCTCAAAGACCTCTTTGATTACAGTCCCCCTCTACACAAGAATCTGGATGCACGAGAAAAGTCTACCTTCAGAGAAGAGAGCCCACTTAGGATCAAAATGATAGCCAGTGATTCTCATCGTCCTGAAGTCAAACTCAAAATGGCACCTGTTCCTCTTGATGATTCTAACAGACCTGCTTCCTTGACTAAAGACAGACTGCTTGCTAGTACACTTGTCCATTCTGTCAAGAAGGAGCAAGAATTCCGATCCATCTTTGACCACATTAAGTTGCCACAGGCCAGCAAAAGCACATCTGAGTCATTTATTCAACACATTGTGTCCTTGGTTCATCATGTTAAAGAGCAATACTTCAAATCATCTTCAATGACCCTAAACGAGAGGTTCACTTCGTATCAGAAAGCCACTGAAGAACATAGTGCCAGGCAAAAGAGCCCTGAGATACACAGGAGAATTGACATCTCTCCAAGTGCCCTGAGGAAGCATACCCGTTTAGCAGGGGAAGAGAGAGTTTTTAAAGAAGAAAATCAAAAGGGAGATAAAAAATTAAGATGTGATTCTGCTGATCTTCGGCATGACATAGATCGTCGGAGAAAAGAAAGAAGTAAAGAACGGGGGGATTCCAAGGGCTCCAGGGAATCCAGTGGATCAAGAAAGCAGGAAAAAACTCCAAAAGATTACAAGGAATACAAATCTTACAAAGATGACAGTAAACATAAAAGTAGAGAGCAAGATCATTCTCGATCTTCATCCTCTTCAGCATCACCTTCTTCTCCTAGTTCTCGAGAAGAAAAGGAGAGTAAGAAGGAAAGAGAAGAAGAATTTAAAACTCACCATGAACTGAAAGAATACTCAGGCTTTGCAGGAGTTAGCCGACCACGAGGAACCTTTCATGATGACAGAGATGATGGTGTGGATTATTGGGCCAAAAGAGGAAGAGGTCGTGGTACTTTCCAACGTGGCAGAGGGCGCTTTAACTTCAAAAAGTCAGGTAGCAGTCCAAAGTGGACTCATGACAAATACCAAGGGGACGGGATTGTTGAAGATGAAGAAGAGACCATGGAAAATAATGAAGAAAAGAAGGACAGACGCAAAGAAGAAAAGGAATAGGAAATCTGAAGTAAGATTGCAACAGAGAACAGAACTTGCACCCACCATTTTTTTTTACATGATTTTTGTTTTCAAATAAGAATGTAAGCATTTTACTTAAAATTTTACTGTTTGCAAGTAGTCTAGAGAAATTTTGTTTTGAATCTTCAAATATCTTGAAAAATAGTAGACTGTATGTTGAAAATTGTACTGAAATAAAGTAGAAAATTGTTACGTACCATATTTGTAACTATCAACTTTTAAAAAAATATATACTTTTACTGTTTTTGTTACATGCATTGTAATTCTGCTTTGTCTATAAGATATGGTCAAGTACAGCTCTGTGAAAGTTCTGATTCTCTCCCCTCCCTGTTTGTGTTAATGTTTATTCTGAAGTAAACGTTAGCTCTACATACAGATCCCTGAAGAGCAATTGTCTATAGAGACCACACTAATTATTTTAACTGTATACATCTGTTTAACATTCTCCTTAATTCAAACACACTACATTGTAGGGTGACTAATTTTTGAAGTATACCATGGAAAAAGTTGTTATTTTGGTAAACTAAGCTAATTTAACATCTCATCAAATGTTTAAGATGGTAAAAGAAGCTTTGCCAATAGCTCAAAAGTACTAGCTGTTAAAAGTTAAATTGAAAAGTATGAAAAAAATTTTTTCTTAAACTGAAAGCAAGCAGTGGGCTATAAAAAACATTTTTAGGAGCCTTTACCATTTGCATTCAAAATTCAGTGTTCTCTGTTTTCTTTGAAAGTTTGAGTCATGGTCTTAGATATCAGTTCTTTGAGAGAGGAATCTGGTTTGTAATAATACAAACAAAACCCCCATTCCTACGGAACGTCTTACTTAAAAAAGAAAAACAGAACAAAGCCTGTAATTCTGATATTGGTATGGTTATTCTGCAGAATAACTTGATAATGTTAAAAAGATGTGTACCTGACGTCATATCTCACATACTTATTTGAGCTTTTAGACAGCTGAATCACTAGTTCATAGTCTAACTATAAGGAATAATAGGCAAACAGAATATACTGCTCATTAGTAGTATTTTAAGAAACTTGTTTTCCAAATGTCACCAATAAAAAGATTTGACAGGAAGTTTGTCACAGCATTGATCTACCTTGTTTTTTTTCCCCACTATTTCTGTTTCAGTTTGTAAAATGGGTTTTTCTTTTTCTTTCCAAGGGTTCTGTTCTTCAGGAAGATAATCTTTCAAATGTGAATTGCCTTTAATTTATGTTTATGATGATATCTCTTAGAAGGAATGAATATCGGAAATAGTAAAATTTCAGTGCTAAGTCTGCTCTGTGAGCATAATATAAAAGTAGTCAAATTCATTTTGTTAATTCAGCAACTGAATTAGTTGTATTTGTTTGCATTAAAAGATAATGATTATTGTGTTAGTGTAAACAAGCATTTTAAGTGTATGGCTCGTTCATGCTCACTGATGATTTAGGATGCTTCTGGCACCTTGATTGCAGTCAGAGGCATTTACCTAACAGCTATATGAGGGGAAAAATAGAAAAACAAAACTCAACAAATGTGATGTTCATGGCCCTAAGATCCTTAAGCATTGCATGATTTCTCTTACTTTGTTTTTCCGAAATTGAGCAGAAAGGAAACACTGTAAAAACAAATATATGTTGCATTAATCAGGACATAACTAATATTCTCCTAGTCAGCATAGCACGTAATTACCTGCTAAAGCAACATGGATCTGATCTCCAACACAGGAAAATTTTCACCTCCATTTTATTTTATACAAATAAATTTAGCTTTTAACAATTATTATTTGGTTAGATACTGAATCTCTGTACATGACTGTAAATGCGGAGTTTTGCTTTTCCACATAAGAGAAGTGGAAAGGGGAATTTACTGAAAAATTATTTAATAGGGAGTAGGAATAAAGCTACCTAAGGCCTATCAGCAGGTTACAAGTTCAAGTGCATTGCTTTAACCCACATGTACTCATATTTGGTTACTTGTATTAAAATTGAGGGGAAGAGTATCCTATTAGAAAATAGTGGGAAGGGGGATTGTGAAAACACTTCAATAGAATGCCATTGTGGCTGTTATCTTTGTTTTAGAGCCAAGCATATAAAGAAGCCTGTCTTTAAACCACAATTCAACTCTACACTTCATGACATGTTATAAAAGCTGAATGGTTGGTCTTGGTAAGGATATTTGTTTACAAGTGCCAGAAAATAGTAGCTGTTTGATAACCTGCATTAATAGATTTCCTTTTGCCTACAGAAGGAAAATAAAAATAACCAAAGGATATTTCTAGAAAGGATTAAGAAAGCTGTTTAAGAAGGCCATGACTCAGTCCTTAGCTGTGTACACTTTTCAACATCTTAGAAATTTTAATATAAAAAGCATAATTTGTTTTTCCTATTGCAGCCTACTTTTGGAAAGTACTATTTTTCCCTTTTGTCACAGTTAAAATCAAGTGTTGGGAATTCAATTACAATTTGAGTAAAAATATACCCAATAAGAATGAATGTAGATGGCTAAACGATTCTTACTCAGTGTGATGTATAATGCAACAGGGACCCTTGTAAATTGTCATATGCCAATAAAATGTCATAAGTGGTAATAGCTGTTGTTTGTTTACCTGATTTTGAGACTATGTCTGTGTCTTTGCTGTACAGCTAATGTTAGTGGTTTATGTCTAATTTTAGGATACCAGCTCATCTGTTAGTAGAGTTACTAGTATGATGGGGCTTTTGGGGAGATGAGTAAATATTCTATAAAACTGTTCAAATTCACATCTATTTTTTTCTTTTTTCCTCTGAAAACATGGGAAATGTTACAGTGGTGATTGTAAGCCATTTGTTAACACAGCAATTCCAGATTCTAGTCTAGCCTTCCAGTTCATGTGTTCATATAAGAGCTGTCAGCTATAAATTATGATGGAGACAGCAGCATTACTTCTGTTTCTAAAAATGTGGTAGTTATCAACTAAAAAGTGTTTTTTTGGGTTTTTTTTTGTAACTTAGTCTTTTTTCACTTTGAGTTAGAACTGGTAATTCTTAACTTCACTTAACCCTTTTGTAAGTTACTTGAAATATAAAGTGACCATTCTGTAACTTTAAACAAGAATTTTCACAGAAATTTGTGTGCTAAGGTAACGTTTTGATTAATAACAAATGTTACTCCTTTCTCTGTATGTTTAACTACACTGGATAATTTTAACATGTATCAGCTACCTACATAAAAGTATGCCATCTTATTTATTAAGGACTTATTTTCATAAGATAGTTGCTTTTTTTCGTTTTTGACCGCAGCATGAGGGAATCTTAGTTCCCTGACCAGGGATTGAACCTGTGCTCCCTGCGGTGGGGGAGAGGAGCCCTAACCACTGGACGGCCAGGAAATTCCTCTCTTTGACTTTTCAGCTGGAATCTCTGGGATATACTTTGTTCCATGTGGAATGATATTCCTTTCACATTCAGAACAAGAAGTACAGAGACCTGTCTGAATTTGTAACTTGCTTAAATAGGGAAGGAACGTGGAGAAATTAACTTCACCCTTGGATTGTATTTGATTGGTTTCAATCTATATAAGTAGTAGATTGTGATTGATCTTTGACAAAATTTTAGAATATTATCTGTTACATAACATCTTGGATTCTCAAAATATGGTTGAAATCATTATTTATAAATGTGAGTGTCAAGGGTTTAATTGTTCAGTTTATTGAGGTGGATGTTAAAAATTTGAAGTTTATGTTAATGAAGTTTAAAGTGAAAATTTTATTTTAGAATCCAGGAATATATAGAAATAACTGTATTCCATTGTTTGACTTGAGAGCTTTAGTAGAGATTGTGTAAATTTATGAACTGGATCAAGTTTCAGAATCATTCAGTAAGTTGTACATCGTGTGCTAGTTCTCTTTATTGTTGTGTTACCTCCTCACATGTTAGTTTTTTCAAAAATGGATCCCAGTGGTTAAAAAGAACAGGCGTTAGGGTAGCACTTTCCTGTGGCTACTAGGAGAAAAATTTCTAAATAATGTGTCTTAATTATAATGATCTGTATGTAAGATATTTTTCTCAAGGACGTTTTAGGTGTTTGACAGCAGTGAACTGATTTGCAGTGCTTTTAAAGTGCAGAAAAGATGATTCTTGAAAGTAGAAAACGATAAGTGGTTTTAATACTATTCTCCTAAGAATTGGAATCAGATTTTTCTTAGTAATCTCTTAGGGTTGCCCAGCTTCTTGATTGAATAATATCGAGCCCCAGAAGTAGATGATATATTTTTAAAATATGTAACCAACAAAAACCTTCTGTATAGCATAGGGAAGAACTGTGCTCAATATTCTGTAATGGCTTAAATGGGAAAAGATTTGTAAAAGATACATGTATAACTGAGCCACTTGGCTGTATACCTGAAACTAACACAACATTGTAAATCAACTGTAGTCCAGTATAAAAAACCCTTCCCACAAATGCCACCCCAATAAAATAAATTGGGACAAGCAAAAAAATGATAGTAAGTACACCAAACACTTAGGTGAAGAAAGGATGTGCATTCACAGTATGAAGTCTGTATTTGACAATGATAACTTCTTGGTACTGTCATAGTAATTGCAAATTCCATGGCTTGTGAAAAGCCACGTAAAATTACCACTTTGACCCTCCAGAATGGTGGTTTACTTGCAGTCTTACTTAGTCCTTGATTGTGGGAGGTCATAATTTTTCTGGCTTATTTGTACTAGAAAAGGAAACTTTTTTGGCTGTGCCACACAGCTTGCAGAGTCTTAGTTCCCTAAGCAGGGATTGAGCCTGGGCCCTGACAATGAAAGCGTCAAATCCTAACCACTGGACACTCGGGGAATTCCCTAGAAACTTAATTTCTAGGGTACTTCTGAGACTGCTATGAGGGAAATGTTAAATGCACTTGGGAATTTTTTTGAAAGCAGTTGAATATCACCACCAAATAACAATACTTGAAATACATAATTTAGAGACTTCTTTAGTGGTCCAGTGGTTAAGAATCCGTCTTGCAATGCAGGACACAGATTTGATAGCCAGTTGGGGAACCAAGATTCCACATGCCACAGAGCAACTGAGCCCACGTGCCTGAACTGCTGAATCTAGGGCCCACAACTAGAGTGTCCCCTCACCACAGTGAAAGATCTTGTATGATGCAACTAATACCTGAGGCAACCAAACATAATATTTCACTGGTTGATGTCAGTATACAGTGATTTTATGTTTACATTTGGTGATGATACTCAACTTTAAAAGTCAACGTGTGGCTCTTTTCACCCCTGTGATAACTGGTAAAGATGCTCGTAACATTTACCTCAGTTACTGTAGCAGTCTTCTAATTTGGAAATCTTGACCTTTAAATTTCACCTTTTAATTGCCATCAGTGAAATGTTTTTCAATTGAAAAAATTTTTTAAATTTC EMBV3_32741 AGACCTCCTGGCCTTCCGTTTCAATGCCTTCAACCCCATTCTGGATCCCTGGGTCTTTAT Gene GeneID:520278|PTGIR:NM_001015622:253_cdna Constitutive 0 NULL GeneID:520278 18 GENE PTGIR NULL prostaglandin I2 (prostacyclin) receptor (IP) EMBV3_00317 GCTGGGCTTGGCAGACTGGCTAAACAAAAACCAAAGAAAAGGAGAAGACCTGATTCCAGG Gene GeneID:280961|ZFX:NM_177490:2_cdna UTR3_Alt 2 NULL GeneID:280961 X GENE ZFX NULL zinc finger protein, X-linked EMBV3_00553 CTAAAGAAACATCTGCGAACACACACGGGTGAGAAGCCATTTACGTGTGAAATCTGTGGC Gene GeneID:539966|ZBTB24:XM_002690116:129_cdna UTR3_Alt 2 NULL GeneID:539966 9 GENE ZBTB24 NULL zinc finger and BTB domain containing 24 EMBV3_35336 AGAACCCAATCTTCAGTACCCATTTTTCGCTAGGGAGCGAGATTACTGGCTTAACTGCTC Gene BVT0102_295085 + 0 NULL GK000025.2:14703187-14873190 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00200933 TCONS_00010779 TCONS_00253025 TCONS_00062753 TCONS_00152859 TCONS_00210177 TCONS_00199063 TCONS_00176249 TCONS_00186108 TCONS_00098302 TCONS_00248863 TCONS_00249283 TCONS_00009883 TCONS_00010052 TCONS_00239219 TCONS_00040583 TCONS_00055867 TCONS_00137302 TCONS_00208127 TCONS_00117484 TCONS_00065249 TCONS_00021596 TCONS_00123618 TCONS_00190323 TCONS_00207068 TCONS_00249989 TCONS_00238357 TCONS_00066192 TCONS_00152628 TCONS_00020652 TCONS_00166617 TCONS_00250580 TCONS_00218553 TCONS_00185582 TCONS_00062743 TCONS_00253665 TCONS_00019962 TCONS_00125001 TCONS_00048558 TCONS_00063180 TCONS_00162783 TCONS_00124845 TCONS_00056728 TCONS_00142124 TCONS_00157440 TCONS_00189890 TCONS_00064461 TCONS_00020016 TCONS_00007719 TCONS_00038667 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00056147 TCONS_00054954 TCONS_00207359 TCONS_00070810 TCONS_00251915 TCONS_00175199 TCONS_00250938 TCONS_00047158 TCONS_00050046 TCONS_00124110 TCONS_00249570 TCONS_00048821 65 XLOC_122583 XLOC_006330 XLOC_155966 XLOC_037480 XLOC_092624 XLOC_128687 XLOC_120716 XLOC_106028 XLOC_112161 XLOC_058548 XLOC_151806 XLOC_152226 XLOC_005436 XLOC_005604 XLOC_145885 XLOC_024399 XLOC_033675 XLOC_083512 XLOC_126640 XLOC_071650 XLOC_039971 XLOC_012269 XLOC_075170 XLOC_116358 XLOC_125587 XLOC_152932 XLOC_145024 XLOC_040909 XLOC_092393 XLOC_011327 XLOC_101454 XLOC_153523 XLOC_131873 XLOC_111635 XLOC_037470 XLOC_156604 XLOC_010640 XLOC_076544 XLOC_028690 XLOC_037907 XLOC_099664 XLOC_076388 XLOC_034531 XLOC_086549 XLOC_095895 XLOC_115927 XLOC_039185 XLOC_010694 XLOC_003279 XLOC_022490 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_033950 XLOC_032763 XLOC_125876 XLOC_042587 XLOC_154856 XLOC_104982 XLOC_153881 XLOC_027294 XLOC_030177 XLOC_075662 XLOC_152513 XLOC_028952 Coding TCONS_00208127 XLOC_126640 NonCoding NonCoding - 6:43190918-43192041 - TSS155634 1123 3 TCONS_00208127_1 47 0.996438112199466 1 0 0.00143440238699656 0.000464609468265689 0.00145264937491336 0.00131940783040205 0.000109910477385109 0.000433796921723655 0.000143845097646813 0.000148760161426659 0.000626064974163403 1.07472453868095e-05 0.000244365465443393 3.18404823521182e-07 0.000114443403932471 0.000272290695353677 0.000357074333918077 9.89750079237541e-05 1.68958361595175e-05 3.36833862582589e-05 0.000570287151704806 0.00257734116017415 0.000509334110875651 9.22706026376343e-06 6.62614548114244e-06 2.58759710312493e-05 0.000497706585581739 0.000675329121553226 0.000110362757675639 4.35432233220708e-05 1.44096440360187e-05 0.000173423399346007 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 3e-34 150 68.54 0.38913624220837 0 noncoding CCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTATATTGCTGAGTTTGGGGTGTCCTTTCTGTATTTTGTCAGTTTGTGGAGTTCTCTTTATTGTGGAGTTTTCTTACTGCGGGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCTTAGTTAGAGAAGCTTTTGTCAGTGTTCTGGTGGGTGGAGCTGGATTTCTTCTCTCTGGAATGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTGTGGTTTTGGAGTAACTTTGGGCAGCCTGTATCTTGGAGCTCAGGGCTGTGTTCCTGTGTTGCTGGAGAATCTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTTTGTGGTGCTTGATTTCAGTGTAGGTATGGAGGTGTTTGATGAGCTCCTGTCAATTAATGTTCCCTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGCCTCCTGCTTCCAGTTATCGGTCTTATTTTTACAGTAGTCTCAAAACTTCTCCTTCTATACAGCACCATTAATAAAACATCTAGGTTAAAGATGAAAAGTTTCTCCACCGTGAGGGTCACCCAGAGAGGTTCACAGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGGTGAGGTGGAATCAATAGAGGAGAGAGCGGGCTAGCCAGTAATCATTTCCTCATGTGCACTCCACAACTGGACCGCTCATAGATGTTCACGGAGTTATACAGAGAAGAGAAGAGGGAGGAAGGAGACAGAGGTGGCCAGGAGGATAAAAGGGAGGAATGAAAAGGAGAGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAATTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACGTGGTGGAGAAAAAGGAGAGTCCAAAGGGGGAGAGAGCAGTCAAGCCAGTAATCTCGCTCCCAAGTAAAAAATGGGTACTGAAGTTTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACCTAAAAGCAAAAATTAAAAATCTAGAGTCGAGTTTGGAATTTCAAAAATACAACGTTAAAAAAAAGAAGGAAA TCONS_00204998 . 5' 167907 TCONS_00204998 . 5' 167907 EMBV3_30133 CTTCTCCGAGAACTTTCTGCTCAGCCAGAGGAATTGACTCCGAAGGCCATGCAGCTAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35360 ATCTTACTGTTTCTGTCTGTTCGTTGATTAAGTGCCGCGTAGCTTCGGCGTGTGCTGAGG Gene BVV0102_038030 + 0 NULL GK000003.2:118184676-118191440 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174886 TCONS_00174884 TCONS_00174885 TCONS_00174887 1 XLOC_104719 Coding TCONS_00174886 XLOC_104719 Coding Coding PER2 3:118189374-118206601 = TSS129678 4323 1 TCONS_00174886_4 748 9 0.749564611633577 0.00252835048020467 0.00102588414069076 0.000726855590743508 0.000477467874630653 0.00138891119358172 0.000274353609667572 0.000350666465854421 0.000425971748188238 0.000607327471231896 8.91242310799799e-05 2.09908934726026e-16 5.46682225206366e-05 0.000136817173562082 0.000862219380647381 0.000305020670891711 2.0171019653232e-06 4.88597336875676e-11 0.000558367532338906 0.000807979683239133 0.00034632623363224 0.00015046674416412 2.34479529899576e-09 1.90983349544488e-05 4.55691716910277e-12 0.000660206413015942 0.000699730664005906 0.000787838404581398 3.76620420190658e-16 8.58956351010026e-13 2.45987450057504e-13 NM_001192317.1 PER2 Bos taurus period circadian clock 2 (PER2), mRNA. 0.0 4066 99.96 0.521859819569743 XM_005246111.1 PER2 PREDICTED: Homo sapiens period circadian clock 2 (PER2), transcript 0.0 1350 72.16 0.563960212815175 TCONS_00174886_4 sp|O54943|PER2_MOUSE PER2_MOUSE Period circadian protein homolog 2; 0.0 782 61.07 0.978609625668449 1 coding 1 1 1 1 -0.0122551101773554 0.935459412976901 -0.00156170872107589 0.978640058852107 TGCTCCAGAAATGCAGAGCGGTTCCCCGACTCCGATGAAAGCTGCTGCGGCTGTGGAGAAGGACAGCTCTGGGGCCAGCCTGCCCGAGGCCACCCCTCCCGAGGAGCTGGCCTGCAGGGACCCGCCGGCCGGCTCCTACCAGCAGATCAGCTGCCTGGACAGCGTCATCAGGTACCTGGAGAGCTGCAGCGAGGCAGCCACCCTGAAGAGGAAGTGTGAGTTCCCTGCGAGCCTCCCCACGCCCCAGGCCAGCGACAAACGCCAGGCCCTCGCGGGCCCTGGGCCACACGCCACAGAGGCAGCATCGCCCTCGCCAGTGAAGAGCCGCACGGACGCGAGCGCACGCCTGCTGTCGCCGCCGCTGCCCGGCAGGGCGCAGAGCGTGGCGTCCCTCGGCAGCCAGTGCAGCTACAGCAGCACCATCGTCCACGTGGGCGACAAGAAGCTGCCGCCGGAGCTCGAGCCGCTGGGAGATGCTGCTGCAAGCAGGCCCGAGTCTCTGGAGTGCCCGGCGGGCCCCGCGCTGCCCTGCGGCCTCAGCCAGGACCAGGAGGCCTTCCGGAAGCTGGGCCTCACCAAGGAGGTGCTGGCCGCCCACACCCAGAAGGAGGAACAGAGCTTCCTGCTGCGGTTCCGGGAAATCAGGAAACTCCACGTTTTCCAGTCTCGCTGCCATCATTATCTGCAAGAAAGGTCCAAGGGGCACTTGAGCAACAGAACTGCTCCCGGACTAAGAAATACCCCTGGAATAGACTCCTCTTGGAAAAAAAACGGAAAAAACCGAAAACTGAAGTCCAAACGTGTCAAGCCTCGCGACTCCTCTGGCAGCACCGGGTCTGGGGGGCCGGCGCCCCAGCGCCCCCCACTGGTTGGCCTGAACACCACGGCCTGGTCCCTGTCAGACACGTCACAGTCCAGCTGCCCAGCGATGCCCTTCCCTGGCCCGGTGCCAGCCTACTCCCTGCCCTTGTTTCCAGCCCCGGGAATAGTGACCGCACCAGGGACCGTGGCCACAGGGTCCGGGGCTGCCCACACCGACCTCGCGGTGCCCGTGGATGCCCAGCAGGTGCTCAGGGTCCATCCCCCACCGTTCGCCAGCCCCTTGGCCCCGGTCATGGCGTTGGTCTTACCCAGCTGCTCCTTCTCCCCAGTGACCCCAGCCTTGCCCCCAGCCTTCTTCCCAGGCCAGCTGAACTTTGTGTCTGAGATGCCTCCTGCCTCACAGCCTGAGTTCTTCCCCGATCGGACCTCAACCCCCAAACAGCCATGCCCGTGTGCCCCGGCGGAGCGAGGGCCGCCCGCGTTGCGCATGGCCACCCCAGGAACCCCGCCCCTGGCCGCCGGGCCCCCAGACAGGACCTCCCCGGCGCTCTTCCAGTCCCGTGGAAGCTCACCGCTGCAGCTCAACCTGATGCAGCTGGAGGAGGCCCCTGAGGGCACCGCGGCAGCCACAGGAGCTGTGGGGACCGTGGGTGCAGGCGCCGACTGCAAGCCTGGCTCGTCCTGGGACTGGCAGCCCAAGTCACCTCCGACCTGCAAGGAGCCAGCAGATGCCCCAAACAGCGACGCCCTGTCCTCGTCCAGCGGCCTGCTCCGCCTGCTGCTGCATGGGGACCTCTGCTCGGCCACGGGCTCCGCACTTTCCAGGAGCCAGGCCTCTGCCACCTCCTGTTCCCTGGGCTCAGGTTCCCTGGGCTGCGATGCGTCCGGAAGCAGGCCAGGCAGCAGCCACACGAGTCACACCAGCAGGTATTTCGGAAGCTCGGACTCTTCGGAGAATAACCCCGGAGCAGCAGTGAGGGCAGCAGTGGGCGGGCCTGAGCGCCTGCTCAGGTGTGTCCTGCAGGACCCCGTCTGGCTGCTGGCGGCTGACACGGACGACAGCGTCAGGATGACCTACCAGATGCCCGCACGAGACTTAGATACAGTCCTGCAGGAGGACAGGGAGAAGCTGAAGGCGCTGCAGAGGCTCCAGCCCAGGTTCACGGACGCGCAGAAGCAGGAGCTGCAGGACGTCCACCCATGGATGCGGTTGGGCGGCATGCCCACGGCCATCGACGTGGCGGGATGTGTTTACTGTGAAAACGAGGGAGAGGACAACCTCTGTGTGTCATATGAGGAAGACATCCCGACACCAGGGCTCAGCGAAGTGACAGAGACCAAAGAAGAGGAGAGTAGACCCCCCCAAGGCCCAGAAACGAACGGCAGGTGCAACCCACTTCCCCAGGGCAGCAGCGCTGCCAGTGAGGTCCGCTAGCCCGTGCTCTGAGGAGGGGAAGGCTCTCGCGCGTGTCTCCGGTGAGACGGACAGATACACTTTCGTGGCTTTTTTTGTTTTAGAAAAAAAACCATAGTTTTCTGAAGGGGTGATTTAAAACTATGGAGACATTTGCAAAGAAACGCTATTTTATATTTATGAATAAAATACAAATATAGGGTGTAAGGGGACAGGGGAACGAGACCTTCACTATTTAACTCGAGAAACACTGCCTGCCTCTTTGTGTTGGGAAAGCAGCTGAGCGCCCCCAGGAGTCCTCGGACGGGCTGTCCTGGGTCTGCTGGCTCCCGTGGCCTGTCCCAGGCGTGGCCCAGGCTGCGCCCACCTGCCCGAGGGTCCCAGGGGCTCCGCGCTGAGGAGCAGTGGTCCAGGGCTCGCCCAGCGTTTGTGTTTGTGTTTGGATCAAATCAAATACTGTCCTCTCTGGGGGCGGCTTTTTCTCTGAAATATTTAGTCAGACTAGATGTTTTTGAAACCCACCAAGTGGAGATCACAGCCTCTGCTTATTTTCTTTCAAAAACCTCCTTTTCAAAACGTTTCGCATTAAATGATGTGTAGTTTGACAAACCCGCCGCTTCAGCTCCCAGTGCAGTTGCAGCAAACGTTTCATCTGACAGAGTGTATGTCCAGGGCGAATAAAGTGGAACTGCTCACTCTGGATGAAAGAAGCCGACAGGTTCCTGTGACCAGCTCCACCACGGAAATTACACATCCTCAGAAACATGACACAGACCCTTCTGGGTGTTGCTGCATCATCCGTGCATCCTGCTCAGACCAGGATGGCCCACCTATCAGTGAAAACGTGCTGCCGCTCATCCTCTTCTTGGCACGTGGCCCTCCTAGCCAGGCCGTGACCGCCACGTTTGGAACTCAACGCATGTTGATCCGTCGTTGGCACTTCCCAGGCGTCAGCTCTGGCCCAGCCGAGCCAGCCACTCCTCCTGGATGAGCTGGGCACCGAGTCTGTGTTTCCCAGGGCGCCCGCACCTTTTCATGAGCCTTGGCTCACTGATGTCGCTTCTGGTCTCTGCGGTGATGTCCCCTGCTGCCGCTGGCGCTTTCAGGTAAACAGGACACCCGGGAAAGAGTGAGACCAGACTGCTCACCTTTTTGCAAAACCTCATATCGCATCGTATATCCCAAAGATAGCTTAGAAAAAATGTTATACTGGTCCCTGGAGTGAATGAGAAGCTGCCCGTGATGAAATGATTGACTTACAGTTGCAGAGTCTGTAGCAACTTCAAAGAAAGCAGCTTTTCCCCCTCTGCCCATCCTTTGATGGAGAAGCAGCTCCTAGAATAGGTGAAGCCTCCTTGTAATCCAGTTGGTTTTCTTAGTGAAATTATTTTATGCCTGAATATCAATCTTACTTTTCATAAACGCAAAAAGTTTAATTATTTTTTTAAACATAAAAGCTTCAGATCCCCAAGGCGAGGTGTAGTCTGTGTGTGTGGAGATCAGATGCTACAAACTGCTTCTTGCCTGAGTCAGATCATCAAGGGACAGTCAAGGTTGCATTGACTTTACCTGAACTGCCAAAAGGTTCTCTCCTGTTACTGAATGTTTACCATCAGCATTATCTTACTGTTTCTGTCTGTTCGTTGATTAAGTGCCGCGTAGCTTCGGCGTGTGCTGAGGAGTGGACAGCACGAGCCGCGTAGCTTCGGCGTGTGCTGAGGAGTGGACAGCACGAGCAGCTTGTGAAACCGTTTACATGGCGCCAACACGCACCCGGTCTTGTTTTCTCTAGTGTGTGTGCTTCCGTGGGTGTTATCAAGACTTCTTCTCAATTTTAAACTGAGCCTTCTTTTTAATATATTCCTGAAAAGGTATGTAAATAAGCTCTCAGAGTCTGTGTAACAATATGTCAAGCCTTGCCGGACAAGTGGTTTGTTTATGCTCAAGCCAGACTTTCTTCACCCAGTGCTGTATGTTTGTTGGACTGCTTGTGTCTTTTTATGACTTTTTTGCTTTTTAGAAAATTGGTAAATAAAGCAAGTATATTTTTATTTTGTATATTCTTAATATAGCACAGAGAAATAGGA EMBV3_14826 TAAAGAGCTCTGTTGAATGTCATGAATTGAGTGGGGGGAGAAAATATTCTAGAAACCTGC Gene BVV0102_143267 + 0 NULL GK000008.2:53797123-53970330 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14487 TGCCAACACGCTGGGCGGGAAAAGGACTGCTGGGCTGCAACATTATTCCATTGCAAAGAT Gene GeneID:513315|PSMD9:NM_001034441:147_cdna Constitutive 0 NULL GeneID:513315 17 GENE PSMD9 MGC128752 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 EMBV3_11993 GACCCATTAGGGGTCTTCTGTATAATTGACTCAATGGCAGACTTCCAAGCAGTTGGCCAG Gene BVT0102_216506 + 0 NULL GK000011.2:30736476-30763318 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024599 TCONS_00024600 TCONS_00024597 1 XLOC_014541 Coding TCONS_00024597 XLOC_014541 Coding Coding STON1 11:30683134-30739322 j TSS18009 5293 1 TCONS_00024597_3 732 4 0.905867905387367 0.000116701908582224 0.00020563596667621 9.59319243487996e-05 1.48682976859924e-09 4.09093855776114e-05 4.17467669749703e-05 0.000119091877431786 4.83695335781646e-05 9.59726055981037e-09 0.000260826533093198 7.00394985126244e-05 9.72524359736322e-05 2.60314368244886e-06 0.000111948899630007 3.62690819034604e-10 0.00202158180681988 0.000307386844751937 0.000896987068039073 4.54955886087116e-09 7.39664318980948e-05 7.63200313790147e-13 0.000207939954112334 0.000525014006069041 0.00107053802429593 0.000221919113273502 5.75798228508838e-05 0.000128652933812554 0.000111692775929556 0.000233626219117506 0.000233312414469697 XM_005212542.1 STON1 PREDICTED: Bos taurus stonin 1 (STON1), transcript variant X1, 0.0 9546 100.00 0.999811071226148 NM_006873.3 STON1 Homo sapiens stonin 1 (STON1), transcript variant 2, mRNA. 0.0 4091 83.60 0.71717362554317 TCONS_00024597_3 sp|Q9Y6Q2|STON1_HUMAN STON1_HUMAN Stonin-1; 0.0 1287 86.68 0.998633879781421 1 coding 0 0 0 0 -1.42890540536875 0.00317740306811084 0.0352235112187772 0.504290800747117 CTTCTCCTCTGTCTACTCCCTCCTCCTCCTGCTCCTCCCTCCGAGGTGGATGGCCGCTGCCAGAGTCGGAACCCCAGCCGCGCTGCGGAGACAACATATCTGATTCATTGGCAAGACCACAGTCTGATCCCAAAGATGTGTTCCACGAACCCAGGCAACTGGGTCACATTTGATGATGACCCCACTTTTCAGTCTTCTCAAAAGTCAAAGAATTTCCCTCTGGAGAATCAAGGCATTTGTCGGCCAAATGGACTTAAACTGAACCTTTCTGGCGCTAAGGAATTTCCCAGTGGATCTTCCTCTACCAGCAGCACCCCTCTCTCCTCTCCCATCATAGACTTTTACTTCAGTCCAGGACCTCCAAGTAACTCTCCTCTTTCTACACCTACCAAAGACTTCCCAGGTTTTCCTGGCATCCCCAAAGCAGGGACTCATGTGCTTTATCCTATTCCAGAATCATCTTCAAACAGTCCACTTACAACAGCAACAGGTTCTTCCTCATTGGCTACTAAGCCAACCTGTTTCTCCCAAGCTTCCTTACCCAGCGACCACTCATGTATACATCCAGCCTCCAAAGTGGGTCTTGCAGATGAAATGAGCCCTCACCAGGCTGAAGGGTTCCAAAGTGATACTCCCCAATTTCAGTATTTTCGGGAGGACTGTGCCTTTTCAAGTCCGTTTTGGAAAGATGAAGGCAGTGCTTCCCAGCTCACCTTTGACCCTCCAGGAAGCAGAAAGATCTTCCCATCAAGAGACAAAGAGGTGCCTGTGGATCAAAAAGGCTTAAATCAATGTTCACTCAACTACATCTGTGAGAAGCTTGAATATCTCCAATCAGCTGAGAACCAAGACTCATTTGGAAATTTGTCTATGCAGTGTCTGTATGCTGAAGACCCTGCCTCTTCCTTTGTCCCCCACATGCTCTTCAGGAGTCAGCCAAAAGCTGGATGGTCTTTCATGATGAGAATTCCAGAGAAGAAGAACATGATGTCTTCCCGTCAGTGGGGGCCAATTTTTCTAAAAGTCTTACCTGGAGGAATTTTACAAATGTATTATGAGAAGGGGTTAGAAAAACCATTTAAAGAGTTACAGCTCGATCCATACTGCAGGCTTTCTGAACCCAAAGTTGAGAACTTTAGTATGGCAGGAAAAATCCATACTGTGAAGATTGAACATGTGTCTTACACAGAAAAAAGGAAATATCATTCTAAGACAGAAGTAGTTCATGAACCAGACATAGAACAAATGCTGAAGTTGGGGTCCACAGAGTACCATGACTTCCTTGACTTTCTGACCACTGTGGAGGAGGAGCTGATAAGGCTGCCAGCTGTTTCAAAACCAAAGAAAAACTATGAGGAGCAAGAAATTTTCCTGGAAATTGTGGACAATTTTTGGGGTAAAATCACTAAAGAAGAAGGAAAATTGGTTGAAAGCGCTGTGATAACTCAAATCTCTTGCCTCTGCTTTGTGAATGGCAACACTGAATGCTTTTTAACCTTGAATGACCATGAGCTACAGAAGCGAAATGAACGCTATTTTGAGAAAGATCCAGAAAAGAAGGGGATTGATATTCTTGACTATCATTTTCATAAGTGTGTGAAAGCACAAGAATTTGAGCAATCAAGAATCATTAAGTTTGTACCTCTGGATGCCTGCAGGTTTGAGCTGATGCGTTTCAAAACTTCGCACAGCGGGGAAGATCTTCCCTTTTCCCTGAAGTCGGTAGTGGTTGTCCAGGGGGCGTATGTGGAGCTTCAGGCCTTTGTCAACATGGCCCCGTTGGTCCAGAGACCATCCCATGCCGGTTCCTGGAGGTCCTGTGACAACATAATGATACACTTTCCTGTCCCGTCTCAGTGGATCAAGGCCCTCTGGACCATGAACCTCCAGAGGCAGAAGTCCCTGAAAGCCAAAATGAACCGCCGGGCGTGTCTGGGGAGTTTACACGAACTTGAATCTGAACCTGTCATACAGGTCACGGTGGGGTCTGCAAAATATGAGAGTGCCTACCGGGCTGTGGTATGGAAGATAGACCGGCTTCCTGATAAAAATTCAAGTCCTGATCATCCCCATTGTTTGTCTTACAAACTAGAACTTGGATCAGACCAAGAAATTCCCTCCGATTGGTATCCATTTGCTACTATTCAGTTTGGGATCCTTGATACCACTGCTTCAAGGACAGAGGTCAGGTCTCTGGGGGTGGAGAGTGATGTCCAGCCTCAAAAACACATTCATCATCGGGCTTGCTACAACATCCAGGTTGAAATAGAAAAGAAGTGGATTAAAATCGATGGAGAAGACCCGGATAAAGCTGGTGACTGTGTAACTCAGTAGGAGTAGCAGGAGTCAGTGATGATGACCCACTTTGCAAATACATAATTGACAGAAGCCACACCAAGTCCTCTACTGCTGTGCAGTGGGAATGACAGACCCACTGGCCGTGTTTAGGGGAGTTTAGACCTGCAAGCGAACCAGCTATCCTTTATGCTTTTGATATGTTTGTGCCCCAGGGGTTTGATCTAAAATGTGTCTTGAATTTTTGTGATATTTTTATTTCCTAGTAGAACTCAAAGGCACTCTTCTCCAGTGTGTGACCTCACAGCCACTGGCCAAAGCATTTTTGATTACTTGGGGGCTGATTGTTTTCCACTCTGGGTTGATGCCATGTTTATTATCCTCCAGCCCCATCTCTTCTTATTAAGTTAGCACCTGTTCTAGAGGAGAAGGCAGTTGAAGGAGACATAAACCAAAGTACTTAATTTTCCCTCTTGCTCTTCTCTGAAACGTGGCTATTGTAGAATGATGTGGAAACCACAGGCTAAAATGGAGATGTGGAACTCTCTCTGATTCTGAATTATTTATCTTCCTGTCTTGTTATCACATTGGTGAGTAATCATCAGCTGTATTTGGTACCTCTCTTTCCCCCGTGGTATTATTATTTTCAAAATGTATTTGTGTGCTGATATGTGCGGCAAAGACACTAGTTCTGTTACTATGCATATTTTAGTACAAGTCACTGAGACATACTGCCTTTTGCTTGGAGAGATTCCTTTCAGAATGAAATCCTAGTATGGACACTAGTTAAAATATTAATGTATGTTAAAAATGAATTTTCATAGTCCATGAATATTGCTTCTCAAAAGTGTAGACTCTAAGAATGTATTTTGATAAAGTATTATTTGTAATTAACACAAGCCCCTCTTAAGTAGAAGTCTGAATCATGATTATTTTATGCTAGTCCTGCTAACATGCTATTTATGCTAATTCTGCTTAATTTAGAGTGATTTTCTTTAAAAGATGAGCAAAGTGAAAGATACTAGATTATTTTGTCTACATTTCTAACAAGTGATATTTCTATTTTTCAAAGTCAGATAAATGTTTGTTTGTTTTTTAATGAAAAAAGTCAATGGCATTAGCAATTATAATTCTGTTTATAACTTCCTTTAAGTGTTTACAGTGAAAAGTCAGACTTTTAAATTTAGGAAATCTATGTTCTAGATATTTTTTTAGTAGGAAAAACATGGAAAAAAACATGATATTAATACACCTTCAATTTATGTTGATCCTTAAATATGATTAGGAGATATTTTTCTCTATTTACCGGATTTGTTTTGAGTCAAAACTGATATGACAGTATTCTTCCAAACAACATTATCTGTTGGCCCTCATACATTTTATTTAATGTTATATTACATTCATTTTAATCTGTTCAAAATGCAAATTAAAACAAACATTTATGATGGTTTGTATCAATCAGCAGATTTACTGCTTTTCATTATTTTACTGTAAAGGCAAAGAATGCAAAAGTTGACTGTTAAAATGAATTGGTATTGCTCTTTTTAACTTCACTTGATGTGTTGCTCATAATATCACATGCTTGAGACTCGCTATAGATATATACGAGAGCAAATCTGTGTGTGCATCATATAAAAAAAATTCTACCATCCTGACTCACCTGGTGTGGCACATTCTGGAATGACTTCAATCTGCTCAGAGCAAATATGGAGGCAGGCTGAACTTGGTGCTGCTCCATGGTCCCAGGGACGGTAACTGAGTTAATGACTGCTGGTCCTTTCAGATCTGTTTTATGGCATCCTGCCCATAAAGAACTCAGAGTCTTATTCGGATGAACTTAATGAATATTTACACCTCAAAGTAATTTCAGCATAGGGTCCAATTAATCACCCCTCAGGCTTTCCAGGTTGCCAGCATGTGCCGGCACCTCACTGCTGGAGTCATTTATTCACCAGCCCTCCAGCCTTCAGACGCATCTCAAGATTCAGTGCTGAAAATAATAACAAAAAGCTGACTGAAGCCCAAGTTGAGTTTTTGTGGCAATGCAAAGGGTGATGGTAGGAACAGCAGGGTTCTGCAGCATAATTGTTCATTTGCACATCTATTAGGGTCCTTAAATATTCATTACTTAGCATTAAATTAACATTCTTTGTTGGGTGGAGAGAATTTTTAATACAGTTCTTCTGACCTGAGCTGTGGCAGAAGGTCAAATGTGATCTTGGTGCTCTAAGTGAAAAATCAGGTAGAGTCCACTTAGACTTACAAATTAAAAAGTAGAATCTCCTTTTCCAGAAAGTAAATGATGATCTTCAAAACAACAATGACAAAAACTCCTTCTTTTAAGGTCAGGAAGGGAGGAAGGAAGTGAATGAAGGAGGAACTACTCCTTACTAGCATTTTAATTTAGGTAATTTATTTAGATCAATGCTTTATGAGCTTGACCCATTAGGGGTCTTTTGTATAATTGACTCAATGGCAGACTTCCAAGCAGTTGGCCAGTTTGGGATGGGTTGCTCTGCTCTAATTGGTCTGGTCTAGTTGCCTTACCAGTCAAAGGATCGTATTAACTCTGTAAATGAATTCCATGGCTTGATGGTTACCTGATCAGTTGTACAAATCTGAATTTAAGGACATTTCCTTTTTTTTTAATGGGACTAGAAATAGTTTATCCATTTAAAAAGAATGGAAAAAAAAAAAGCCCTCCTTAACATAAATAAAGGCTGGCATTTTGACCTGATTTCTGTGTTAGGTAATTGTAGGGTTTTAGTTCCCTTCATTCTGGGTTTGTGTTTTGATATAGACCTTTTTCTCTTATAAATTCGGTCAGGAGGCCTTCCTTAATAATGACTAAGTATTATTATATCTTACTCAAAATATGATTTTATGTCGTCAATACAAATATAAAACATATTGAGCCTTAATAATCATGTAACAAAGTATTTTGTAGATTGCATATTGATTTTTTAAAAATTAAAGATGTATTTCAAATGATTCTTGA EMBV3_28183 ATCAGGCGTGTTCTGTGAAAGTCGCCCAGGCTTCCATCTCAGGCATCCTTTTCTGGGCAA Gene GeneID:616298|LOC616298:XM_002700210:146_cdna Constitutive 0 NULL GeneID:616298 X GENE LOC616298 NULL similar to Chromosome X open reading frame 38 EMBV3_41800 TCTCCTGCATTCTCAGGCAGATTCTCTACCACTAGTACCACCTGGGAAGCCCCATTTAGT Gene BVT0102_308837 + 0 NULL GK000002.2:125558652-125600539 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37039 CTTCTGAAGATGCCTTTGGTTTGAAATAGGAAGGTTGAAGGAGACCCTAAGTATTTTAGG Gene GeneID:508541|STAT3:NM_001012671:91_cdna Constitutive 2 NULL GeneID:508541 19 GENE STAT3 MGC128731 signal transducer and activator of transcription 3 (acute-phase response factor) EMBV3_38445 GCCTGTGCAACATCAGGTTCAGCAGCCTGTCCACCTTCATCGCCCACAAAAAGTATTACT Gene GeneID:528338|ZFPM1:XM_002694855:793_cdna Constitutive 0 NULL GeneID:528338 18 GENE ZFPM1 NULL zinc finger protein, multitype 1 EMBV3_28757 GAGAAGGGGCCCAACTTATTGATTGTGGCCAGGAGCTGGATGTTTCTCTTAGAGGTCAGA Gene GeneID:509497|SUMF2:NM_001014881:278_cdna Constitutive 0 NULL GeneID:509497 25 GENE SUMF2 NULL sulfatase modifying factor 2 EMBV3_08992 TCTTCAGAGTCATCTACAACGGCAAGAGGAACAGTGGCCCCCGCTCTCCCCTCAACAGCA Gene GeneID:783157|LOC783157:XM_002690061:5_cdna Constitutive 0 NULL GeneID:783157 9 GENE LOC783157 NULL hypothetical LOC783157 EMBV3_38138 TAACTTAGATTATTCTTGGTAAAATATAAAGTCATTTATTTCTAATTCTTAAAGTTTATA Gene GeneID:513237|SBDS:NM_001034439:314_cdna Constitutive 2 NULL GeneID:513237 25 GENE SBDS MGC129036 Shwachman-Bodian-Diamond syndrome EMBV3_28159 TGGCAGGCGCTTTCTGGGCACAAACGGAGCAACACTCTGGCTGTGGAGCTGCCTCCCCAA Gene BVV0102_057248 + 0 NULL GK000014.2:4030388-4130181 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048812 1 XLOC_028943 NonCoding TCONS_00048812 XLOC_028943 NonCoding NonCoding - 13:49018692-49019337 - TSS35988 645 1 TCONS_00048812_1 97 1 0 1.05470556467492e-05 0 7.41276963642213e-05 0 0 5.77690039552415e-05 0 4.58505571066637e-06 0.000272178487746958 0 8.87282004216321e-07 8.31556057528012e-06 5.93134807224284e-06 3.16030536889996e-05 3.9436128036391e-05 2.04741304973556e-05 1.28699791788864e-05 2.91754561426782e-05 0 0.000111866731292832 1.68651177652844e-05 5.75244607176062e-06 7.11165666945104e-06 0.000356952247466072 0 0.000255784860341289 3.91475823134471e-05 0 1.75618616030724e-05 5.20440340619046e-05 XR_236255.1 LOC101905928 PREDICTED: Bos taurus uncharacterized LOC101905928 (LOC101905928), 6e-08 62.6 72.52 0.178294573643411 0 noncoding 0 0 0 0 0.0425495311291958 0.704658756308425 -0.00959511421808806 0.842321262614134 CCTGGGCGTTTGGGCTCCCTAGCAGAGCCGCAGCGCAGGGGAACCAGCCCATGATCAGTGAGCTCCGGGCAGTTACTTTGGTCCCAGGTTTGGAGCCCAATGCCCGGAACGCGGGAGAGAAGAGGCTGGCTGCCGGCGGGTGCTTGCAAGGCTGTACTGGGAAGGACCGAGTGAGCTTCCACACCGGCGGAGCTCCAGCTCTGCGCCCAGGCGCGATAGCACAGAGCCCCGGCCGAGAGGCTGCTCTGTGCCGAGCGAGCCTCCCCAAGGCCTGCCCAGCTTCTGGCGTTCGCGCCCGGGAAGGAGCAGGCTGCGGGAGTGTGGGAGCCGTGAGTGGTGCCTGACTGCTGCCTCAGCTCAGCTCTCGCCTTCCCTTCGGACCTAGGAGCCAGGCGTCCTTGCAGAGGGCTTAGGGGCTGGGGGTGTGCACACTGCCAAAGCCTCCCTCGGGGAGAGCTCTTTCCGAGGGAAAGGAAGCGCCCCAGGCTGCATTCCCAAGCTGGTGCTTCCCCGCCCAGACTAAGCGCCGCACGGAGGGAATCAGGGTCCCGGTGCCCCTGGCTTGGGGAGGCAGCTCCACAGCCAGAGTGTTGCTCCGTTTGTGCCCAGAAAGCGCCTGCCAGACCGGGCCTTCCCTGGAGCTGT TCONS_00045373 . 5' 339981 TCONS_00045373 . 5' 339981 EMBV3_29746 AGGCTTTCATGGGGCTAAAGATCCAAGTGAACCTGTCTGCCAACCCGTGGCGCTGTGACT Gene GeneID:618432|LOC618432:XM_002696007:414_cdna Constitutive 0 NULL GeneID:618432 19 GENE LOC618432 NULL similar to hCG2044133 EMBV3_04548 CAGCCTGCCTGGCCGCAATGATAACTCCTACATGTACATCCTCTTCGTCATGTTCCTCTT Gene GeneID:527762|KCNE3:XM_002683752:1_cdna Constitutive 0 NULL GeneID:527762 15 GENE KCNE3 NULL potassium voltage-gated channel, Isk-related family, member 3 EMBV3_14785 ACCCCCCGGGATCGAAGCCTCACGTACCAGTACAAGATACAGGACAAGAGTGTATCCTTT Gene GeneID:512966|TMEM103:XM_002697056:536_cdna Constitutive 0 NULL GeneID:512966 22 GENE TMEM103 NULL transmembrane protein 103 EMBV3_31481 GATACTGTGGAGCATTGCCTGAGAAAGTGAAGCATGGCTCTGTGTACTTTGAGGGTGGAC Gene BVV0101_075498 + 0 NULL GK000020.2:54776611-55351894 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36272 GTAGTGGGATTGTAACCATAAAATGCAGGTGTATTTAAGTCCTTGAAATGGTCAAATGTT Gene GeneID:532021|PRMT10:NM_001099051:13_cdna Constitutive 2 NULL GeneID:532021 17 GENE PRMT10 MGC151858 protein arginine methyltransferase 10 (putative) EMBV3_41989 AGCAGTGGACACCACCTAACCAAAAGCAGCAGTACCTGGGCTCCTAACAGACCACCAGGA Gene GeneID:783134|LOC783134:XM_002695426:94_cdna Constitutive 0 NULL GeneID:783134 18 GENE LOC783134 NULL similar to Leukocyte immunoglobulin-like receptor subfamily B member 3 precursor (Leukocyte immunoglobulin-like receptor 3) (LIR-3) (Immunoglobulin-like transcript 5) (ILT-5) (Monocyte inhibitory receptor HL9) (CD85a antigen) EMBV3_35471 CATGCAGATGGGACCCATTGTCTGTTACTGCTTTAAGGAACTGAATCTTTTATTCTCATA Gene GeneID:541218|POLK:NM_001102258:45_cdna UTR3_Alt 2 NULL GeneID:541218 10 GENE POLK MGC152198 polymerase (DNA directed) kappa EMBV3_00739 CACCAAGAGCTTCACCTTCTTCAACTCCATGAGCCCGCTGTCGTCGCAGTCCATGTTCTC Gene GeneID:508754|PITX1:XM_002689193:63_cdna Constitutive 0 NULL GeneID:508754 7 GENE PITX1 NULL paired-like homeodomain 1 EMBV3_36353 CTTCCACACCCCGCCCTCCCCAGGTTCTTCAGTCTGCCAAGAAACAAATTAAATGGTCGT Gene BVT0102_027622 + 0 NULL GK000019.2:39081251-39126673 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10816 AATCATTCCTCATACCTATTGTGAGCACATGGGAGTGGCTCGTCTGGCTTGTGCCAGCAT Gene GeneID:787584|LOC787584:XM_002693185:166_cdna Constitutive 0 NULL GeneID:787584 15 GENE LOC787584 NULL similar to olfactory receptor Olr185 EMBV3_16459 GAGCTTCTCAGCGGGAGTGTCACAGAGTAGGGTACAAAGGCTCCGTAAGGGTTGAGAAAA Gene BVV0102_344038 + 0 NULL GK000002.2:92589914-92720587 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105865 TCONS_00105868 TCONS_00105873 TCONS_00105867 TCONS_00105866 TCONS_00105864 TCONS_00105872 TCONS_00105870 TCONS_00105869 1 XLOC_062660 NonCoding TCONS_00105865 XLOC_062660 NonCoding NonCoding - 2:92647032-92693194 - TSS78016 2664 3 TCONS_00105865_4 76 0.201201201201201 6 0.942418925066615 0.000138289955723285 0.000120991275727408 2.4880467594585e-05 1.43683530939261e-11 2.30879259458558e-18 2.08342505960532e-05 1.65069426284275e-07 8.05899171848929e-05 0.000139691249180192 0 0 6.71566595422057e-67 2.04848566880502e-19 4.38830920334047e-05 1.00801841951859e-05 0 0 0 5.08346571243892e-06 0.000118526016574277 1.8639673856281e-05 0 0 0 0.000353666413014049 2.71648527936931e-05 3.51545380916151e-99 1.07611980701992e-05 1.76600277348044e-114 0 NM_001015563.1 PIGM Bos taurus phosphatidylinositol glycan anchor biosynthesis, class M (PIGM), mRNA. 2e-21 109 81.74 0.0427927927927928 0 noncoding CACTTGACTGCCATCTTAGGCAGGGAGCTTCTCAGTGGGAGTGTCACAGAGTAGGGTACAAAGGCTCCGTAAGGGTTGAGAAAATGTGGTAGCAAATAGGAGGGAATGCTTAGCTCTTCTCAAGTGTTTTCTCAGGTTCCCCTGTTCCTTTAGGAAACAAAGTATCAGGAAGCTGAGCATTCAGAGTTCTGAGTTAATGCTAAAACTGGCCTGGGGCAAAGAGGAGATGCCAACCTGTAAGATCAGACCAAAATTGTAAATAAGCAGTTGAAAAATTGGACACAAATTCAGCATATCTAGAGACTTCCCTGGTAGTCTAGTGCTTGAGAATCTGCCTTGCAATGCAGGGGATGTGGGTTTGATCTCTGATCTGGGAAATAAGATCCTACGTGCCAGGGGCTGGCAGGGGCAGCTAAGCCTGTGCTCCACAGCTACTGAGCCTGTGTGCTGCAATGGCAATCCGGATGATGCAACTAGGGCTCAATGCAGCCAAATAAATAAAATATTTTTAAAATCTTAGCATATCCAGCTGTGGAAGATGCTAGCACAGATTTCTCCTTTCTTGCCTCTAAAGCAGGGGGTGGTTCTGAGTTCTCTTATAAACTTAGAGGGCAATCTCAAGAATGATCACATAGCTTTGGGGGGCTGGCTTAGCCTATTTAGATTGACGAAGGTATTTGGCTTTGCATTAAGCTGTTATCTGCATGTGAAAGCAGTGGTATTTATTTAAGTCAGTCTCTGAGCTTCTGTTTCCCCAACTTTAAAATAGCAGCAGTAATACCTACCCCTTACTTTCCTCAAAGGGAATTTGTGATGATAAACAAATAATGTTCCACATAAAACTCAGTTTGAGCTCCTAGAAAGAAATGAGCACAACTTAAATCAAGTCTCCTTCTCCACTTTGAAGTGAATGCCTCATTGAGATAAAACATCATCAGTCCTTCTACTAGGGTACAACCACGCAGCCCTAGTAGTCCCTATTTCCTCATCAAAGAACAAGATCCTCAGATAATACACAGTCTGCTGTCGGGTTCAGTTATGACTCCTCAAGGTCTAAGAACATATGACCTAAAAATGAACTAACTGGAAGCCATCTGCACCCAGAGACTTAGATGGCATGGTAACATCTTTAATGTGGTCTTTGTTCTAAGGTTGAATTGTTTCAGTGAACTGAGAATTCTTACCCTCTTGAAGTCTAGGAATATTTCATCCTCAAACAGTCCATCAGAAATGTAAATCTTTATGTGTGGATTCTTTATCACTGAGCCACTGAGGAAGCCCAAGAATTATTGTATGCTTGGATGAAATTCCTGCTATGAAAGATGTGGTATTCTCAGCTGTAACTCCAACCCACTGATAAGGAGGAAGGGAAGACAATGGAAACTCGAGTCAACTATATGCCAAACACAGTTCTAATGAGGCAACCCTTTAAAGGAGTTTATATGTTGCCTTGGCTTGAAAATATCCAAAGGCCTCTATCATTCTGGCAGAATGGAAGCTAACCTGATCTTCAGATGGCTGTGAACATTCTGCAGCACAGTGGAGTGGAAGAAGCATTTGTCTCAGGAGACCAGGTCTGAGTCCAGGCTTTGCCTTGTAGTACCTGTGGGACTTTTGGACAAATCACTTCCTCTCTCTAAGCCTCTATTTCCTCAGCGGTTCAAGAGGGGGCTGGATCAGGAGAAATCTCAGGCTTATTCTGCTCTAACGACCTCTGAGTCTATGCAAGCTGGCTGAATGTTACCTTGAGCCCTGCCCAGAATATCCAGTTGGCTAAAATTTCTGCTCTGGTCTTAAAATATGACTTAGTAGGATTTTCTTTTCATCACCTGACTTATGTCATTTGAAGGTCATCTGTGACCACTAGAATGAATGCGATTTTAAGCCCTTAAAAACAAAAATGATAATTATTCAGTGACATCATCAGTATGTCACCCATGAGTTTTGCCACATTGGCTATATGATTTGGTAATAATTATCTGCAAGACTCTTTCACAGGAAACACCTGCTGAGGTGTAGGTCAGCCCGGCTGCTCTAAATATGAAACACTTCTTCTGTTCCTGTCCCTGCAGAAATAGAGATAAGCAGGGCAGACTCTCAAGAAACCTCAAAGCCCCCAGCTTCCTCTTCATTCTCCCTTTCTTCCGTCAGGGTCTGCCATCTATTCTAGCCACTGCACCTTTTATTGTATTCCTAGATAGAAATGCAAAGGAACCACCATTAGGACATGTCCTTCTACCCAGTTCTATCTAATTTAATTGTCCTGGTCATATTTGATTTTTAATATTTTTTTCTTTCCTATTAAAAGAAATAAGAAGTTAGTTGCTTTTAATTTAGTTGAGATTTTCCTCAGTGGGAAAACAGTGAGTATGAAGAAATGGGTAAGAACATAATGATGGTTTTAGGTCTCTGTCTCATGCTGTCTCCTACCGTGCACTTTCCATCAACTCTGGATCAAGAATTGTGTCCCTGTGACCCTGACTTCTCTTCTCTCCCCACCTCCTTGAAGTCAACTGTTTTCCTTTCAACTTTCTGCTCTAAGATGCCCAACTATTCATCCCCCATCCCCACGTTTCCCCCATTCTCCTGGGGTTCCTCGTTGGCTTAGGTTCTGCTTTGTCCACACGGTGGTAATATCACGATCCACTCACCTGTTCAGGGAAT TCONS_00103014 TCONS_00103015 TCONS_00103016 TCONS_00103017 TCONS_00103018 TCONS_00103019 TCONS_00103020 TCONS_00103022 r 3' 57042 TCONS_00103014 TCONS_00103015 TCONS_00103016 TCONS_00103017 TCONS_00103018 TCONS_00103019 TCONS_00103020 TCONS_00103022 r 3' 58268 EMBV3_33230 GACACCAGTGGTTGTGGATTTCCATGCACAGTGTCAGCTGTGCCCACCGTACTGGCTATG Variant GeneID:281557|TXN2:NM_174208:161_cdna 330^453 5 EMBV3_32744 GeneID:281557 5 GENE TXN2 MGC137598 thioredoxin 2 EMBV3_42902 CTTCTCCTCCCTCACTTTCTCATCACCCTTTCATGACTTCCTGGGGTTCCACTCATCCAA Gene BVV0102_127342 - 1 EMBV3_12356 GK000008.2:43197990-43377721 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21378 TTCGAGGATTTGCTCAAAGTGCTGGGGGTGAATGTGATGCTGAGGAAGATCGCAGTGGCT Gene GeneID:493998|CRABP2:NM_001008670:58_cdna Constitutive 0 NULL GeneID:493998 3 GENE CRABP2 MGC159737 cellular retinoic acid binding protein 2 EMBV3_22877 CGGACGTGAGGCTGATGAAAAGGAAAACAGAAAAAGTTGGTGATTCAAGGAAAGCATATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01543 TCCTGGAAAGGGTTGCGAAAATATCTTGGGAGGAGAAAAGAATGAGTACGTGGCCTCCCC Gene GeneID:522636|IL31RA:XM_002696326:72_cdna Constitutive 0 NULL GeneID:522636 20 GENE IL31RA NULL interleukin 31 receptor A EMBV3_24835 GGTCCAAGAAATTCTGCAAAGAAGACAAGAGCCTTGAAGATATGAGCACAGGGGCTGGCC Gene BVV0102_338232 + 0 NULL GK000003.2:96749213-97746194 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170824 1 XLOC_103664 Coding TCONS_00170824 XLOC_103664 Coding Coding AGBL4 3:97092525-97094414 j TSS127545 1179 2 TCONS_00170824_1 79 2 0.376588983050847 0 0 0 1.02097517528702e-32 6.00312187759736e-22 0 0 0 0 3.48981489735991e-06 0 0 0 0 0 0.00136151418058326 8.49487746505987e-05 0.000105691048307367 8.53599856591877e-145 0 2.57483304373035e-07 6.92343625362927e-05 0.000529121743899187 0.000540335427264546 1.4586533522347e-63 5.5517506581948e-42 0 0 8.23510768095443e-06 4.07956146810642e-05 XM_005201968.1 LOC534913 PREDICTED: Bos taurus mariner-like transposase (LOC534913), 0.0 818 75.86 0.893977947413062 NM_001243723.1 SETMAR Homo sapiens SET domain and mariner transposase fusion gene (SETMAR), transcript variant 2, mRNA. 0.0 928 78.80 0.864291772688719 TCONS_00170824_2 sp|Q53H47|SETMR_HUMAN SETMR_HUMAN Histone-lysine N-methyltransferase SETMAR; 1e-18 80.1 69.39 0.786885245901639 1 noncoding 0 0 0 0 0.203723801719259 0.258565365154732 0.0297935666755219 0.604699284084191 GTAACCTTGGACGAGTGGACCAGGTCTCTGAGTTTGAGTATGATTTATTTATTAGGCCAGACACCTGTAATCCTCGCTTCCGAGTCTGGTTCAACTTTACCGTTGAAAATGTGAAAGAATCACAGACTAGGGAAATGATATTAGGCAAAAAGCAAAGTTGAGTAATTTTCTTATTCAAGCTCAAAATGGTCATCAAGCAATGGAGACAATTTGCAACATCAAGAACGCATTTGGTCTAGGAATTGCTAACAAATGTACGGTGCAGTGGTGGTCCAAGAAATTCTGCAAAGAAGACAAGAGCCTTGAAGATATGAGCACAGGGGCTGGCCATTGGAAGTTGACAACCACCAACCCGAGAAGTTGCCAAAGAACTCAATGTGGACCATTCTATGGTCATTCAGCATTTGAAGCAAATTGGAAAGATGAAAAATCTCAGTAGGTGGATACCCATGAGCTGACTGCCAATCAAAAAAAAAAAAAAAACAAGAATCATCATTTTGAACTGTTGTCTCCTTTTATTCTATGCAACCAACTATTTCTTGCTTGGATTGTGTCCTGCAATGACAAGTGGATTTTATACGACAACCAGTGATGACCATCTCAGTGACCGGACCAAGAAGAGGCTCCAAAGCACTTCCTAAAGCCAAACTTGCACCAAAAAAAGTCATGGTCACTGTTTGGTGGTCTGCTGCCCATCTGGTCCACTACAGCTTTCTGAATCCAGGTGAAGCCATTGCATCTGAGAAATATGTTCAGCAAATCAATGAGATACACTGAAAACTGCAATGCCTGCAGCCAGCATTGGTCAACAGAAAGAGCCCAATTCTTTTCCATGAAAACATCCAATTGCACGTTGCACAACCAATGCTTGAAAAGTTGAGTTAGTCTACAAAGTTTTGCCTCATCCACCATATTCACTTGACCTCTAGCCAATGGACTACCACTTCTTCAAGCATCTTGACAGCTTTTTGCAGGGAAAAGGCTTACACAAACAGCTGGAGGTAGACAATGCCTTTCAAGAGTTTATCGAATCCTAAAGCATGGATTTTTATGCTACAGGAATAAACAAACTTATTTCTCATTGGCAAAAATGTGTTGATTATAATGGTTTCTATTTTTATTAATAAAGCTGTGATTGAGCCTTGTTATAATGATTTAAAATTCATAGTCTGAAACCAC EMBV3_30770 TTCCAGATCCCAAATCCCAGCAAGCAGCCAACGGCCTTCCTCCACAAACCCGGACACTGT Gene GeneID:100297709|LOC100297709:XM_002687974:107_cdna Constitutive 0 NULL GeneID:100297709 5 GENE LOC100297709 NULL similar to patatin-like phospholipase domain containing 3 EMBV3_41480 TGTGTGCAGCCCAGAAACACAGGGAGTATGATATGGTGGTACTCAGAAACGCATCTGCTC Gene BVT0102_112225 + 1 EMBV3_29212 GK000001.2:105228020-105900096 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009852 1 XLOC_005405 NonCoding TCONS_00009852 XLOC_005405 NonCoding NonCoding - 1:105843802-105843950 - TSS6929 148 1 0 0 0 0.000125054019257962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000826043982570192 0 0 0 0 0 0 3.95888584238897e-05 0 0 0 0 noncoding 0 0 0 0 -0.0195446506471039 0.90945756553377 -0.0558158440108215 0.297242590596457 CTCCAAGAGCAGATGCGTTTCTGAGTACCACCATATCATACTCCCTGTGTTTCTGGGCTGCACACAAGGTAGTAATACTCAGTACAAGGAGAAGGAATACATGATTTTGATTTTGATTGACTTTTCCAATCAGGTCTCATGGCTGCCT TCONS_00004749 . 3' 855177 TCONS_00004749 . 3' 855324 EMBV3_05534 TAAACTATATCATGCCAGTTCAGTATGAAAAAAGAAGAACCCAAGTTGCCGGAAATCAGA Variant GeneID:613455|IQCG:NM_001038195:92_cdna 383^495 1 EMBV3_35099 GeneID:613455 1 GENE IQCG MGC134361 IQ motif containing G EMBV3_02704 CCTTTATCTGGGTGGGCTCCTTCTCCATAGACTTTCAGGATGTGGGAAATGGAAGATGAA Gene BVT0102_077501 - 0 NULL GK000023.2:10918350-11044100 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134061 TCONS_00134059 1 XLOC_081288 NonCoding TCONS_00134061 XLOC_081288 NonCoding NonCoding - 23:11012821-11014145 - TSS100014 418 1 TCONS_00134061_1 48 0.27511961722488 2 0.685563114134543 0 0 0 0 0 0 0 0 0 0 1.09528924137473e-05 0 0 0 0 0.0004964994527329 4.79550749413255e-18 0 0 0 0 6.18754809723968e-05 0.00103013996783901 0.000979120050880729 0 0 0 3.87761051069484e-12 0.000443853388539358 2.43837786551037e-05 XR_229533.1 LOC101907794 PREDICTED: Bos taurus uncharacterized LOC101907794 (LOC101907794), 1e-64 250 100.00 0.327751196172249 0 noncoding 0 0 1 1 -0.104002654273169 0.472566375286216 0.00658735911532298 0.908677520443279 TTCCTTTATCTGGGTGGGCTCCTTCTCCATAGACTTTCAGGATGTGGGAAATGGAAGATGAAAGAAGCTGAGTTTTCAACCTATCAGGTTACGGCGTGTAAAATGGAGAGGGAAAGCGGGGGAGGAGGGGAGAGGGAGACCAGAGAAGGCCGCTCCGGAGAGGGACCAGGGAAACCCAGTTTGGGAACTGGCCGGGGAGAGTGAGAAAGAAAGTGCTGGGCGTGCAGATCATATTTCACATCACATCAGAGCTGTGGAATTTCCTCTCTTCTAGGGGGAGGCCTGTGAAGAGAGAAGTTGGTTTAAGAAAGCTGTTTGGGATTTTTCAGTCTATCAGGGTCATCATTTTCAGACATCTATTAGTGCCAATACTGTAGTCGCCTGAGAGGCTCAGTTAATAAAGATTTCTGGTTGATAG TCONS_00134062 TCONS_00134063 TCONS_00134064 TCONS_00134065 TCONS_00134066 TCONS_00134067 TCONS_00134068 TCONS_00134069 TCONS_00134070 s 3' 31169 TCONS_00134062 TCONS_00134063 TCONS_00134064 TCONS_00134065 TCONS_00134066 TCONS_00134067 TCONS_00134068 TCONS_00134069 TCONS_00134070 s 3' 29956 EMBV3_33262 CCTACAAGGACTCCATTAAAGCATTTGCAGAAATCTGCAGACAGAATAAGCTCATTCAAG Variant GeneID:505011|SPC25:NM_001034230:205_cdna 265^330 1 EMBV3_25924 GeneID:505011 2 GENE SPC25 MGC128692 SPBC25 SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) EMBV3_15691 TTGAGGAGGCGCTATGCTTCATTTCCGGTTCCTTCTGGTTTCCAGTTTTGCCTTGAGCTC Gene GeneID:513889|CHCHD4:NM_001046159:22_cdna Constitutive 0 NULL GeneID:513889 22 GENE CHCHD4 MGC137699 coiled-coil-helix-coiled-coil-helix domain containing 4 EMBV3_29601 CGAGCTGCAAGCCAGGATCCGAGAGACCTACCCTGAATTACGGCGTGTGTACTTTAACAA Gene GeneID:511375|SFXN1:NM_001015574:230_cdna Constitutive 0 NULL GeneID:511375 10 GENE SFXN1 NULL sideroflexin 1 EMBV3_25929 TCCTTCAGCAAGTGTTTGTGGTGGATTATGTGAAGTATGGGATGCACCAGAATACACTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06103 GGCCACTCATGTGCCTTACTTTTTAAAGGGGGTTTACTGTATTCACTTGAACGTGCAGCG Gene GeneID:100125927|PDCD6:NM_001105497:5_cdna Constitutive 1 NULL GeneID:100125927 20 GENE PDCD6 MGC140796 programmed cell death 6 EMBV3_09091 AAGTGAAACTGCCTGTAGGTGAAGTCATAGGTCTGTGAGACATCCTTCCTCTGGGGGTTG Gene GeneID:540024|LOC540024:NM_001081539:54_cdna UTR3_Alt 2 NULL GeneID:540024 11 GENE LOC540024 MGC142879 ashwin EMBV3_31096 GCAATTTCGTGCCATTCAGGAATTCTGGGCGGGGGCCATTACGTCACTTATGCCAAAAAC Gene GeneID:537257|USP32:XM_002695643:77_cdna UTR3_Alt 2 NULL GeneID:537257 19 GENE USP32 NULL ubiquitin specific peptidase 32 EMBV3_04503 TGATTGAGTATGACCCTGAAAGACGATTAGGTGAACGCCATCTGCTACGGGGCAAAGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11109 AGCTTCGCGCGCCTCCAGAGGTGGATACAGAGACCTGGTTTGAGTTTTGGTTTTTGCTGA Gene GeneID:100296567|LOC100296567:XM_002694313:34_cdna Constitutive 0 NULL GeneID:100296567 17 GENE LOC100296567 NULL hypothetical protein LOC100296567 EMBV3_41170 GTTAATTTTTTGTTGTTGCTGCCGCCGGTGGAATCAGAGACACGGACGCAGGCAGGATCA Gene GeneID:515527|TMEM150B:NM_001102025:166_cdna Constitutive 0 NULL GeneID:515527 18 GENE TMEM150B MGC179377 TMEM224 transmembrane protein 150B EMBV3_36258 GGCACTGCTGCCCTGGGAGGAATTTATTTGGGAGTTTCAGCCACATTCAACATGTCCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19037 GGTTCTGGCTGCAGATTTCTCACTGGTCACATGGCCCCTCTTTGTCACCTGCTTGTAGTA Gene GeneID:617809|BCL2L13:NM_001078082:100_cdna Constitutive 1 NULL GeneID:617809 5 GENE BCL2L13 Mil1 BCL2-like 13 (apoptosis facilitator) EMBV3_13681 CACCTGCCAATCACAGCTTTACTCTTTCAGGTCACTCTGGGGCTGCCTCTTGCATGTATT Gene GeneID:523226|PCDHA13:NM_001102506:247_cdna UTR3_Alt 2 NULL GeneID:523226 7 GENE PCDHA13 MGC165970 protocadherin alpha 13 EMBV3_38905 TACCTCAGCAACGACCGCACCATCCGGCTGTGGATTTTGGCTTAAATAGGGTCTTACCTG Gene BVV0101_017571 + 1 EMBV3_33593 GK000010.2:11555271-11563977 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24609 AACCTATGTTGCTCCACTCGGTGACAGGGGCACAGGGACTCAGAATATAAACAGAGGACA Gene BVV0102_177654 + 0 NULL GK000023.2:51056199-51115435 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17884 GACGTCAGCAGTTATGTTGAGGGTTGCACGCTGTAACTGTGGAGTTATCATTCTTCAGCT Gene GeneID:781349|LYZ1:NM_001080339:61_cdna Constitutive 0 NULL GeneID:781349 5 GENE LYZ1 LYSOZYME LYZ lysozyme (renal amyloidosis) EMBV3_43769 ATGTGGGGCACAGACATGTGTCCTGTGTGGGGAAACAACCTGAATTCAAAAGAAACCTGA Gene BVT0102_043788 + 0 NULL GK000007.2:81396511-81533589 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00222604 TCONS_00222603 1 XLOC_135912 NonCoding TCONS_00222604 XLOC_135912 NonCoding NonCoding - 7:81424360-81424818 - TSS166602 458 1 TCONS_00222604_1 46 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.57016900258957e-05 0 0 0 0 0 0 0.00037099455667786 0 0 0 0 noncoding 0 0 0 0 -0.0848063489530842 0.576986524461899 0.0268232735671805 0.568457259132498 GTCACTGCAAAAAGCGTGGGTCTTCACAGGCTGCTGAGCTGAATGTGGGGCACAGACATGTGTCCTGTGTGGGGAAACAACCTGAATTCAAAAGAAACCTGAAATCCAAATGGATGATCCCACCATTCTGTAACCTGAGACAAGGTTACAGAATCAAACAAGTTAGGACTGAAAAGTGCAGTGGTGTGGCTAGAAATCAGTTGTGAATAGAAGCCATAAAGAGAGGCCAACCCGCCTTTCAGAAAAGAGATTGTTTCTTTGAGCGTCAGTCTCCTTCTTTTACATCAAATCATATTTGAAAAAATCCAGCAGAATTAACCATGCCTCTTCAAAAGGGAAAAGAAACTCTCCCTCTGTGTTGTAATGTGAATAACCCCTCTTCACCACCAAGCATGGCTTTAAACTTTGTTGTCATTCAGTTAGGTCTTCTTATTGTCTTAGATTTGCCAGGGAGGCTT TCONS_00214291 . 5' 108698 TCONS_00214291 . 5' 108698 EMBV3_03290 CACTCAAGACACCTTCCAATCCACTTGGGAAGAGAAACACCTGAGACAAGTCCAGATCGG Gene GeneID:100138192|IFNK:XM_002689492:20_cdna Constitutive 0 NULL GeneID:100138192 8 GENE IFNK NULL interferon kappa EMBV3_12556 GGCAGATAAAACAGATCACAAAGGAGAACTTCCTCGGGGATGGAACTGGGTTGATGTGGT Gene GeneID:509865|RWDD4A:NM_001076824:28_cdna UTR3_Alt 2 NULL GeneID:509865 27 GENE RWDD4A MGC139956 RWD domain containing 4A EMBV3_35070 AGCCTGAGGGTCATTTGAGAGGAGGTGAGAGTGACATGCAGCAATGGACAGGACTCAGAA Gene BVV0102_192346 + 0 NULL GK000019.2:34105533-34124208 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01405 TGCTGCCAAGATAAGGACTTTCAGACTTCGGATGAGCAGGCCAAGGAGGCCGGGTCAGAA Gene GeneID:788653|LOC788653:XM_002699318:335_cdna Constitutive 0 NULL GeneID:788653 29 GENE LOC788653 NULL hypothetical LOC788653 EMBV3_09667 TGTCCACCGCCTCCTCAGCAAAGACAACAGGTTCTAACGTTCCCATGGACCAGCCCTGCT Variant GeneID:520311|SH3GL3:XM_002696595:60_cdna 805^855 2 EMBV3_05522 GeneID:520311 21 GENE SH3GL3 NULL SH3-domain GRB2-like 3 EMBV3_35897 TCACCAGTCTTCAAGTCAGAACCTGTTTGTATGGCGGGTCTGGTTACCTCTTCCTCATGC Gene GeneID:530159|CDKAL1:XM_002697545:318_cdna Constitutive 0 NULL GeneID:530159 23 GENE CDKAL1 NULL CDK5 regulatory subunit associated protein 1-like 1 EMBV3_30876 TTCAGGCCGTACATTTTTCGCAGGCACACTACAGAAATGATGTTATGCTCTTCTCAGTAC Gene BVT0101_048383 + 0 NULL GK000005.2:85366361-85480246 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20913 GGGGGGAAGCCTTTAGAAGGCACTCATTCTTCACGTGAATCTAAGAACATTGACACTGGG Gene GeneID:516885|ZKSCAN5:XM_002698214:790_cdna Constitutive 2 NULL GeneID:516885 25 GENE ZKSCAN5 NULL zinc finger with KRAB and SCAN domains 5 EMBV3_09408 CATCCCCCTCATCAGCAAGTGTGGCTCGTACCCCCCAGGACCTGGCTGTGGCCTACCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14852 GAATCGATAGACCTCTCCTACAACAAGCTCTACCATGTCCCCTCCTATCTACCCAAGTCG Gene GeneID:533916|ECM2:NM_001034597:102_cdna Constitutive 0 NULL GeneID:533916 8 GENE ECM2 MGC128563 extracellular matrix protein 2, female organ and adipocyte specific EMBV3_30264 ATTCAACGGTCAGTCTACAGGAAGACCGGCTAGGTCAAGCTACAGAAGGTAAAGAGCTCC Gene GeneID:533324|LOC533324:XM_002685507:32_cdna Constitutive 0 NULL GeneID:533324 2 GENE LOC533324 NULL similar to Protein FAM126B EMBV3_29503 GGCCATGAAGAAACTTATGTATCTAATTAGAAGTTAGAACATGTTTACTTGATCCTTCAA Variant GeneID:515069|FKBP3:NM_001038112:244_cdna 754^795 2 EMBV3_04221 GeneID:515069 21 GENE FKBP3 MGC134043 FK506 binding protein 3, 25kDa EMBV3_27790 AGGCTTTCTGTGCTGGAGGTGATATCAGAGATTCTTGCCAGAAACCATATATTGCACTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06302 AAGCAGGAGAAGAGGGAGCCGCTGAGGGGACCAGTGAAACCAACAAGAGACTTAGTTCAT Gene GeneID:614460|PAG1:XM_002692713:137_cdna Constitutive 0 NULL GeneID:614460 14 GENE PAG1 NULL phosphoprotein associated with glycosphingolipid microdomains 1 EMBV3_13279 CACCATTTATTGCAGGGCACCAAAGGAGTCCAAGAAGCTGGTGCTCATCAGACCCAAACT Gene GeneID:784717|ZNF239:XR_084665:151_cdna Constitutive 0 NULL GeneID:784717 28 PSEUDO ZNF239 NULL similar to zinc finger protein 239 EMBV3_41998 CAGGCATCAGATCCTGGTCCCTGCTGGTTGATAGTCTGGGCTGGAAGCTCTTCTACGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28150 TAAGTAGCTGTTCCCTTCTCTGGGGAATCTTCCCAACCCAGGAATCAAACCGAGGTCTCC Gene BVV0102_177964 + 0 NULL GK000004.2:107094173-107163765 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35795 CTGGGAGGATTCGAGATGTCGGTGCCCTACAGCAGGTTAATGGCAGAGCTAAGATATGGA Gene GeneID:785886|LOC785886:XR_084096:31_cdna Constitutive 0 NULL GeneID:785886 27 PSEUDO LOC785886 NULL similar to testis expressed sequence 15 EMBV3_18039 TTGACCGTGCTTCCTTTGCGCATGCATTTTATTGGATGGGGAGTGGGAATAAGTCATCTG Gene BVT0102_045297 + 0 NULL GK000014.2:68730664-68799570 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052202 TCONS_00053773 TCONS_00053770 TCONS_00053768 TCONS_00053771 TCONS_00053772 TCONS_00053769 2 XLOC_031394 XLOC_031823 Coding TCONS_00053769 XLOC_031823 Coding Coding MTDH 14:68796899-68853910 j TSS39604 6110 1 TCONS_00053769_4 533 0.0945990180032733 12 0.8930363094194 1.22889698470363e-11 1.64577361699026e-09 2.2366525552398e-09 8.49682143317015e-15 6.57215577551629e-05 3.97295690239925e-11 6.19718675840147e-07 8.45158907526909e-18 0.000113512503761031 4.42726772272215e-29 3.24702453976428e-09 1.28639772645022e-36 9.24299956028473e-05 9.2220117611461e-11 1.78617058745351e-07 0.00231794779154723 0.00278812874935256 0.000956348891715332 3.61130551712954e-09 1.39026226326575e-09 8.87903079191409e-05 0.000885104899305962 0.000411031872139092 0.00316015011969167 5.33887509120104e-05 4.24637374999488e-05 0.000217171759509661 1.52035627561348e-08 0.000119877630609003 2.67022940057747e-22 XM_005215618.1 MTDH PREDICTED: Bos taurus metadherin (MTDH), transcript variant X1, 0.0 9043 100.00 0.820458265139116 XM_005251098.1 MTDH PREDICTED: Homo sapiens metadherin (MTDH), transcript variant X1, 0.0 3606 88.46 0.464648117839607 TCONS_00053769_4 sp|Q86UE4|LYRIC_HUMAN LYRIC_HUMAN Protein LYRIC; 0.0 815 84.91 0.99812382739212 0 coding 0 0 0 0 0.0087850230583105 0.953662668872621 0.00720254713162503 0.892813007038708 CCCCTCGTCCTCTTGGCAGCGGCAGCGGCCGGTCCCCGGCTCCGGCGCGAGGGGCGGCCGCAATGCGCTCGGCCTGAGACGGTCGGGCCCCGGCGCGTCCTCGCTTCCCTCGACTGTTCCACGGCGTCTCAGCGGCCCGGCGTCATCCTGTGAGTCCCCCGGCTCCCCCTGACGGGGAGGGAAGATGGCTACACGGAGCTGGCTGGACGAACTGGCCCAGGAGGCCGAGGACGGCTCGGCCCGGCTGCAGGAAATGCTCTCGGTCGGCCTGGGCTTTTTGCGCACCGAGCTGGGCCTCGACCTGGGGCTGGAGCCGAAGCGGTACCCGGGCTGGGTGATCCTAGTGGGCACGGGCGCGCTCGGGCTGCTGCTGCTCTTCCTGCTCGGCTACGGCTGGGCCGCGGCTTGCGCCGGCGCCCGCAAGAAGCGGAGGAACCCCCCCCGCAAGCGGGAGGAGGCGGCGGCGGCCGCGCCGGCCCCGGCCGCTGACGACCAAGGCGTGCTGAAGAATCTCAGGAGCGAGGAGCAAAAGAAGAAGAACCGGAAGAAATTGCCGGAGAAGCCCAAACCAAATGGACGGACCATTGAAGTGGCTGAGGAAGAAGTTGTCCGAACTCCTCGAAGTGTAACAGCAAAGCAGCCAATAGAGACAGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAATCAAAGTCAGATGCTAAAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATGAAGGAGCCTGGGAAACTAAAATTAGTCACAGAGAGAAACGACAGCAGCGTAAACGTGATAAGGTGCAGTCTGATTCTGGTTCATTGGATTCAACTATCCCTGGGATAGAAAATACCATCACAGTTACCACCGAGCAAGTTACAACTGCATCATTTCCTGTTGGTTCCAAGAAGAATAAAGGTGATTCTCATCTAAATGTTCAAGTTAGCAACTTTAAGTCTGGAAAAGGAGATTCTACACTTCAGGTTTCTCCAGGATTGAATGAAAACCTCACTATAAATGGAGGAGGCTGGAATGAAAAGTCTATGAAACTCTCCTCACAGATCAGTGCAGGGTCTACCGCTGAGCCAGTTTCTCAGTCTACCACTTCTGATTATCAGTGGGATGTTAGCCGTAATCAACCCTATATCGATGATGAATGGTCTGGGTTAAATGGTCTGTCTTCTGCTGATCCCAGTTCTGATTGGAATGCGCCAGCAGAAGAGTGGGGGAACTGGGTAGATGAAGAAAGAGCCTCACTTCTGAAGTCCCAGGAACCAATTCCTGATGATCAAAAAGTTTCAGATGATGATAAAGAAAAGGGAGAGGGAGCTCTTCCAACCGGAAAATCTAAAAAGAAAAAAAAGAAAAAGAAGAAGCAAGGTGAAGATAACGCTCTTGCACAGGACACAGAAGAATTAGAAAAAGAGATTAGAGAAGAGCTTCCAGTGAATACCTCTAAAGTCCGTCCAAAACAGGAAAAAGCTTTTTCTTTGAAGACCATAAGCACTAGTGATCCAGCTGATGCACTAATCAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTATTTCTACCGAGCCATCTGTTATTTTATCAAAAAATGATTCTGACAAAAGCTCTTCCCAAGTGCCACCGATGCTACAAGAAACAGATAAATCCAAGTCAAATACTAAGCAAAATAGCGTGCCTCCTTCACAGACCAAGTCTGAAACTAGTTGGGAATCTCCCAAACAAATAAAAAAGAAGAAGAAAGCCAGACGGGAAACGTGAATTTTTTTTCTTCCTGAATTGGACATGTGTTTGCAAACACTGTCTTGAAGATTATGCTGTTTATGCAATAATTTGTGAACATGTACAGAGTTTTATATAAATTTAAACCAGTTTTTAAAACAAAACTGTGAACACAACCACCGTAAAAATGGAATCAAAGGAAAGTTAATTTATGAAATTAAGAGGTCAGCAGAACACGCTGCAGTGCTGGAAGACGCTGGGAAGGTCACTCTGATGAGAGCGATCTTAGGGTTATCATCCTGGCTGTACAGCAGTGCCCTGTTTACAACAGCTGTGCCCTGTCTCATCTGCAGCTAAGGAATAAAGGATTCTGATTAGAGAGAAGGCTGCCTGCAAACTAGGAGGCAGCTTCTTGGATCTTATGCACGGAACTGAAACCATTTGAATCTGTTTTATGCTTAAATCAAAGTGCTTTGATCAAATGCATAATCTGCCATATCTTTACATATTTGTTGGTAGCAATTTGTATTAAAGAAATCACAAGTGCAAATAAAAAGTCATTTATTATTTAACTAAACTGTCATGGTTTAGTTTACAATTCTTAAAATGTTCTTAAAACATTCAAAACGCAGTTGACACTTGTATGGCTTATGAAGTTATTTTTTGATAGTCTTACTTTACTTGAATTGTTCAAAGTACAGTATATTTTAAGTTAAGAAAGGTAAACTCTATGTATTTGTTTTATACTTTTAAGGTTCCAGCTCACAAATAATGCTCTTGTGTATGATTTGAAAACTTTCAGGCAAAATCCAACTTACATTTTTTTCCTTTCCCTAGCAATTACTTTTTCCAGCATCAATTCTTCTTCGTTACTAATACTTTTTTGACTTTACAAGTGAAATCTTTCACAAACTAGTTATACAGACAGAACTTTGAGTATATGATGGAGAATGAAAAACTAGAGTCAGACAGCTTTAATTGACATTGTCAAGACCTCCAGTTATCAGGAATACATTTTTTTACTGCCTTAACCTGTAGTGCGTAGAATATGCATCAATTTCTTGAAGGGGATTCGTGTTTTTATAAGAATTTTCATGTAATTATTGCAATCGTGATCAAATAAGGAACGTTTCCTGCTTGAAACTGTATTGATTGAAATGATGTGTGAGACGTTTCACCGTTTTCAGGCACTGTGTAATTCTATTGTAATAAACTGGCAGGTATCTTTGTAACTATAAATAGTGCATGCTCAGCCATGTACACTGTAAATAGCCTTTACCAAACGTGTTTGACAAGGACCATAATTAACATCACTTAGTGAATTGTGATAAAGAAAAAAAGCCATGACTTACTTGATGTGATTGGCTTAATTGTTTTTCTGTGGCGCCAGAATGAAACTGTTTAACAGCTGTAACCAATGGTACTGATCTATCCATCCAGTTCTGTCTCTTCTATTTGATTGTGGTTTGATAGTATTGCATTGTCACACCGGAAAGCTAAAGAAACAGAATGGTTTCAGTTTTGCTGAAGACTGGCCTTATTAATGGACAGCTTTCCTAACAAGCGATTATTAACTTTTATCAGGTGTTAACATCTGTTTCAGGAACACGGCAGTATGTTTACATGTCAGAAGTTTTGTTTAATTCTCTGATATTTCTAAATTGATTTGTTTAAATAAATTCAACAAATGGATAGCACTGGTTTTATTTGCTTCAGTATCGGGATAAATAAGCTAAAGTGCCAGGAGTGAATTTCTTGAAATGACTGTATTAGCTTTATATAGCTGCTTCCTAAAGAGATCCAAGGATTCCTGCGTTGCAGCACTTTGTAAAGGCATCAGCAAAGGAGAATTCAATAGGAAGTCTGTGTAATTTTAGAATGTGCCAAAAGATGTATGCTCAAAAAATTGAACTCTCTCAACTCTACCTCACCATTTCTTTATCTTAGAATTGTGTTGGCTGTGTCGAATGTCGGACTTCTTATTTCTCCATCTTAGTATCTCTCATTGAACCACCAACGCCAGGTGTTACAAACACCTTCTTTTGAGGGGAGATGGGTGCAGAGACAGAGAAGTGCCCTTCTAAATTGGGGTGGATCCGAGATGGAAATAAATACCCATCCCTTCTCTCTGGCTCAAGAACTAGGGCATGGCTTTTATATTTCAAGAGATGGCAGCTATGAGTGTTAAAATGACTATCAGTTCATTCTCTTACACATGCATGAGGTGCAAGCTGTTGCACAGTTAAAACATCATTCATTGTTCATCACTCTCCACTTGTTCCATAAATGTTTATGACATGAAAGCAGTTTCTGGCATCTGAACCAGAGGGATTGTTTTCCAGCATCAACTCAAAAGACATTAAAATCCAGGGAGGAGGGGAAGAGGAGAATTGTCGTCCTTTGGAGGCTTGGATTAGACGTTCCCCCAGCCACTAGTAGGGACATAAGTGACCCCTTTAAAACTTTTATCAGGCCTGAAGGGGATCCTTGTTCTGATTAATAAACAAAGCCTCCTAGAGAAACTATTTAAATAAAACGCCTTCATCCTGACCTGTCTCCCCATACTTAGTGAAAATCCTTCCTGTCCTGGAGCAGGGAATAATGGGTTAGGACTTCCCCAGACTGGAATCCTACCTCTCTGTACCCTACATTGAGCAAAACAACAGTTGAGAGAGTCCAAAAGACAAGTATTGAAATAAAATGTCACTAGTGTAATTGACCGTGTTTCCTTTGCGCATGCATTTTATTGGATGGGGAGTGGGAATAAGTCATCTGAATCTGTTGGTATTATTTCAGAGACTAATCCAGTTTGTACTTGGGTTAAAGATACTGAAGGGCAATATTTAACTACAGAGTTTAGTTTTTCTTAAAAACAATCCTCTTAATATAGTGTGAAATGTCTTTCAAATTTTAGAATTTAGGCTTGAGATGTCTAATAGATGTCTTAAGACTTTCCTATAAACTCATTGCACAAACTGGAATTACCTTCCAACAGACTTAGGGAATGCAAATATGTTATTTGTAAAATGCATTGAGTACTGTAAATAAAACAAGCCATTTTTGTTTTGTTTAAATTGCTCGTTACAATTCTCTTATGGGAGGGGACTGACTGCGCATCCTAAGCTAGTCTAAGAGGCAGTGACTTTTTGATGTTGTTAATGTTTCTAAACTCTAGGTTCTATGTGTTTCAAATGTTCTTGATGCTCTGAAGCCATAGGTGCACTTGGAGGTTTTAAGCACTGGAAAAGGCAGAAGTGTTGAGAGTGAAGCATCTCTTGCGCTCTCCCCGTTTGTGACACAGCGTTGTCTGTGGGAAACAGCCCCCATCGTCTTAGCAGTAGACGTAACTCACCAGGGGCAGTGTATCACTCGCGTCAACCCTTTGAGACCCAAATTGGCATCATTGTTTTAGAAGTTTATTTCTCTTTCATGTCCGTCTGAGAAAGCAGTCCAGAGCTGCTCTGACCCTCGGCGGGACCAGGCGCCCGGGTCCATCCTCCTGTGTTGCTCTTCCACGTTCTCAGCCTGCAGCATCCGTGTCACGCCTGCAGACAGCCGCACCAGTTAGAAACCCCCTCTCAGCATTTCTGCCCCCTTCCTTGAAGAGCTCTTAGCAGGTTATTCACACCACACAGGCTTATCCACGCAATCACTTGATCCTACTAGCTTCAAAGGGGCATGGGAAATACTAAGTCTCTATCCTGGGCTGTCACGGGCCAAATTAACATTCAGGTTTCGTGACTGAGGAAGCAGGAGAGCACGCTATCAGGAACAGCTCGCCGTCTTCTGGCACAGGGTTGGCATATATCGTGTATATTATGCAGCCAAGCATCACTTTCAAGGGCAGGTTAGCTTTTCCCATTGAGCAGAAATTTAAAATCTCTTGGATGCTAACATATGTAATACATTCTGAAAGAAATTTCTGCCACTCGATGCTTTAAATTCTAAAGACCTAGAGGCTTAAAGAAACTTAATAGCCTGCTATCACACATTCACTGCAAGTATAGATTATAACAATTTGCAGGGAAGTTACCCTGGTGTATAATCTTTTAAAAGTTAAAAGACATTATTACTATTCAAAATAATAAAAGATTTCTAATCCTAGCATCAAGACAGGTATATGAGGTGCTTGTAAAATGTTTGCTACCTACCTAATAATTAACAATACTGAGGTTCATGAACAGGCTCATCTGAAGAAAAATTTAAGCAGATTCAAGGTCATCCCCATGATAATGGCATTCTTATTTGTATGTGTGCTTTCCTTTTTTATTTATTGTATCAAAGCCTTCAAAATGAATATATGTAACATGTACATAAATTATAAAGCATAATAAAATGAACACCTCTGAAACCACCATTCTGC EMBV3_17297 TGGAAGACTGTAAAGATTGGGAGAAGGATCCGCAGCTCATTCTTCTGAAGCGCGAGGACT Gene BVT0102_412748 + 1 EMBV3_25097 GK000008.2:5672189-5746599 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19901 CCTCAGCAATGTGAAGCTGAACGAACACTTCCTGAACACCTCGGACTTCCTGGACACCAT Gene GeneID:327669|IDH2:NM_175790:77_cdna Constitutive 0 NULL GeneID:327669 21 GENE IDH2 NULL isocitrate dehydrogenase 2 (NADP+), mitochondrial EMBV3_32130 GAAGCCAGTCTCTACATTTGGCCTGCACTTAAGGGGACGAGGTTCAGGTTCTACCTTTTG Gene BVV0102_067905 - 0 NULL GK000007.2:84016325-84242449 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214413 1 XLOC_130679 NonCoding TCONS_00214413 XLOC_130679 NonCoding NonCoding - 7:84100825-84117209 - TSS160379 1270 2 TCONS_00214413_5 102 0.459055118110236 3 0.922663736800342 3.2139557875714e-05 1.58243025101913e-05 5.10063083230184e-05 0 0 0 2.75514103262912e-05 0 0 0 0 0 4.51855580368085e-06 0.000266682951009451 0 0 0 0 0.000129867253794575 0.000215176701566606 2.39033568813135e-06 0 0 0 2.72775405280111e-05 7.21188860467408e-05 2.76809782419229e-05 0 0 0 XR_229311.1 LOC100296203 PREDICTED: Bos taurus uncharacterized LOC100296203 (LOC100296203), 4e-13 80.6 70.05 0.159842519685039 NR_045161.1 A830009L08Rik Mus musculus RIKEN cDNA A830009L08 gene (A830009L08Rik), non-coding 0.0 684 96.62 0.325196850393701 0 noncoding 0 0 0 0 0.0624712170693782 0.668827285302924 -0.0567642044222818 0.281275746063495 CTGTTACTCAGAAGGTTCTGTCTTGATCCCTTTATCTTCCCACACAAAACAGCCCTTGAGATGGTTTGAAAATGTGTCCATGAATTCTCTGACATTCCTTCCTTCAAAAGGTAGAACCTGAACCTCGTCCCCTTAAGTGCAGGCCAAATGTAGAGACTGGCTTCTAATGAATGGAATTTGGTGGAAATGATAGTCAGTGGCTTCCACGACCAGGTCCTAAAAGTCCTAAAAGATACTGCAACTTCTTTTTTGTCCCTGCTTGTGAATCATAGAGTGCTCACTCTGGGGAAAACTAGCTGCTACACCACAAGAACACTCAAACAGCCCCATGGAGTGGACCTAATGGCAAGAAACTGTGGATTCCTGCCAATGGGCAACAAAAAACTAGGCCTTCTGAAGCAAATAACCCTTCAGTGAGTGAAACTGGGAGTGAATCTTCCAACCCCAGTGAACCCTCAAAATGACTGCAGCCCCAGTTGACAACTTGAATGCCAACTCATGAGAGACCCTGTGCTGGAACCATCATGCTAAATTGCTTCCAGATTCCTGACTCTCAGAAGCTGTGAGATAATAAATGCTCGTTGCTTTGTGCTGATAAATTGTGGGGTGGTTTGTTATGTAGCAAGAGATAACTAATACAGGCATCTCCCTCCGCACTCCACGCCAGACCCTCCCAACCTTGACTTGGAGCAGGGGAAGTTGCCAGGGCTGCAACAGAAGTGTCTGACATCCCAAGGCTAATCATCACCTGGAAGGAAGAAATGTTCAGCATGGTGCTAATTGATGTGTATATTTACTGTGAAGTACTACCCCAGGAGAAAAGAGGCAACCGGCTGCATGAATGGAATTTGGAGAAAGGGCACAACCATCAGACGAAGTGGGAGGAAGAAACATTAACTTCAACAGCTGTTTCTTGACCCCGGCTGTCAGTCTTCCCAAGAATAAATTTTGGAGAGTCCTATTTGAAACAAAGAGGGAGTTTTGGGGGAGAGAAAAGTTGGTTGGTTCCAGGGCGGCCGCCCAAAGGAGCAGGGACCAAGATGCTGGCAGTTACCACGCAGCCTGCCAGCCTCTGCCGGGTGCAGGGGTGGAGCAAAGTAACTCGAAAGCTCCCCTCTCGGCGCCCTGTGCCTGCAGCTTCCCCCCCTAACGCGCGCCCAGATCCAGCGCCGGTGGTAAGAGCCGTAGCTCGACTACAGTAATTCCCCAGCTCGGGCGGCTTGAAACTGCTCGGGCTGAATAGCATTTGCTGTTCCGTCCGGCGGCCGCC TCONS_00217842 r 5' 84376 TCONS_00217842 r 5' 84376 EMBV3_30215 AAAGTACTATAATATGTCCTCCCCCAAGCCTACAACCTGACGATTCCCAGAACCCTGGTG Gene BVV0102_239484 + 0 NULL GK000003.2:101683719-101762641 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28878 CATCAAGGAGTAGACAGAGTCGTCAGAAAGTGTCATCTGCCCTTCGGTTTACCTTTGGCC Gene GeneID:528003|ANKRA2:NM_001046289:130_cdna Constitutive 0 NULL GeneID:528003 20 GENE ANKRA2 MGC137517 ankyrin repeat, family A (RFXANK-like), 2 EMBV3_11634 GATCAGGTAAGAGATGATGGTGCTTCAACAAGAAGGGGGCTGTGAAGATGAGAGAGGTGG Gene BVV0102_089959 + 0 NULL GK000010.2:86887171-86950023 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10874 GCCTGCCGAGACCAAGCCTTCCAGTAAGACTAGAAAAACAGAACTGAATCCAGAGAAGCA Gene GeneID:532427|LOC532427:XM_002688182:123_cdna Constitutive 0 NULL GeneID:532427 6 GENE LOC532427 NULL similar to tigger transposable element derived 2 EMBV3_25135 ATTGCTGCTTCCCCTGTCTCCACATACCAGGGTGCTGTGATTACGCCAGCGATGGACCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02478 GACACCACCGTCTGCTTTCTATCGCTGTGGGCCAAGGCGGTGACTTTGCAGGAGACAATT Gene GeneID:100336403|LOC100336403:XM_002694657:184_cdna Constitutive 0 NULL GeneID:100336403 17 GENE LOC100336403 NULL transport and golgi organization 2-like EMBV3_42784 TGTCTCCTTGTACCTCAGGGTGATGTCCCTGCGGGAAGAAGCGCCAGACAGTCCAGGTGA Gene GeneID:100297813|LOC100297813:XM_002699433:120_cdna Constitutive 0 NULL GeneID:100297813 29 GENE LOC100297813 NULL hypothetical protein LOC100297813 EMBV3_13358 TGCAAAACAGCTCATCCTTTTCTACTTTTATTTATTGTTCCCTTGAAATGACTGACCAGG Gene GeneID:513789|WWP1:NM_001037463:45_cdna Constitutive 0 NULL GeneID:513789 14 GENE WWP1 MGC129005 WW domain containing E3 ubiquitin protein ligase 1 EMBV3_38076 ACGGCACTGCTGGAGGCGAACTCCACGCCGGTGCGTGTCTACAGCCCGTACCAGGACTAC Variant GeneID:511885|PLEKHB1:NM_001113278:57_cdna 665^769 5 EMBV3_28742 GeneID:511885 15 GENE PLEKHB1 MGC128483 pleckstrin homology domain containing, family B (evectins) member 1 EMBV3_06139 GACCACGCCCCGGACCTTCACCGCCCCGAGGGCCATACAAAGAAACTTAATTTTTACAAA Variant GeneID:522329|GTPBP8:NM_001075828:86_cdna 383^481 1 EMBV3_18366 GeneID:522329 1 GENE GTPBP8 MGC142510 GTP-binding protein 8 (putative) EMBV3_09264 TGTTCAGGAGGGCTCCACCCTTCACAAACACCGAGACACAAGAGACGGGTTTTACCTTAC Gene BVT0102_022176 + 1 EMBV3_12915 GK000006.2:108222168-108307671 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210763 1 XLOC_129273 NonCoding TCONS_00210763 XLOC_129273 NonCoding NonCoding - 6:108287567-108288316 - TSS158270 749 1 TCONS_00210763_2 176 1 0 0.00116256903191635 0 0.000247102985937975 0 0 4.77577519028482e-06 0 0 0 0 0 0 0 0 0 0.00179838656653818 0 0.000770482408517788 0 0 0 0.000267501237903138 0 0 0 5.64390048439746e-05 5.47584510063972e-05 0.000115415759537674 9.72217077049667e-05 0.000128433007334555 0 noncoding 0 0 0 0 0.12404454585652 0.346384138624485 0.0194332597358783 0.69535287768554 GAGCCCGCGTTCTGACCCGCCGGGAACGGCTCTGTGACCTTGGCCCGATTCGAATCCGCTTCCTCCACCGTTGGCCCTGTGACCTTGGGCCGGGGCCCTCGCCTGAGTCCAGGTGACTCAGTGGGAGTCGAAGGACCCGTCTCGGGGGCTGGGCGCGCGTTTCCGGACGGAGAGCGCTGGGTCTGGCTGCCGGCTGGTCAGGGGCCTCCCGCCCCGGGCGATGGGGCCGCCGCGAGCCTTCAGACCTGGCCGCTCGCTTAGAATCGCTGGGCTGGAGGCGCCCTTCCCACCTCGTCGTCTTCCTGCTGCCCCTTTGCAGCCACCGCCCGGGGACCCGGTACCTTGCGACCCTGCGCTGTCGCAGGGCGGTCCAGCCGCTCCTCACGACCTCGGATGCACCCGCCGAACAGGCCACGAACCCCGTCAGGCCCTCCCCGGCCCTGCAGTGGGGCCACTCCGCCGGGACCCTCCTACCTGGGCCGCTTGCCCGTCATCGGGAAGCCCCAGGTACAAGTCTGCCCTCAGCCCCGTACCACAGAGATCCCTCGTCGGGCCCCGTGTTCAGGAGGGCTCCACCCTTCACAAACACCGAGACACAAGAGACGGGTTTTACCTTACTTGGCTCCATGGCTGGTTACAGGGCCGAGATGCAGAGGACCTTGGCGCTAGAGTGTATGGTACAAGGGCCTTCATTTGCATTTCTTCCTGGGCCCCACAACCTTCATCTCTGCTGTCAGGACCCACCGCCT TCONS_00206185 TCONS_00206186 . 5' 562 TCONS_00206185 TCONS_00206186 . 5' 562 EMBV3_05204 ACCCCAGCCACAAAAGGCCCAGAAGCAGGAGCTGCCTGCCCACTCTGTGGATCAAAAGTA Gene GeneID:508291|HIP1R:XM_002694568:613_cdna Constitutive 0 NULL GeneID:508291 17 GENE HIP1R NULL huntingtin interacting protein 1 related EMBV3_00250 TCCAGGGAAGTAGGTGTGGGCAGGATGTGTGGTTTGCCTGCCTCATTTAAAGACTGATAC Gene BVT0102_045495 + 1 EMBV3_27320 GK000003.2:48699218-48763974 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10405 GACATGTGAAGATGTATTCTGGTGGAGTCATGAACACAGTGACAGTATGCTTACTTAGGC Gene GeneID:523911|TXNDC15:XM_002689199:80_cdna Constitutive 1 NULL GeneID:523911 7 GENE TXNDC15 NULL thioredoxin domain containing 15 EMBV3_17124 CTTTTGGCTGTGCTAGGGCTTCTTTGCTGTGCATGGGTTTGTTCTAGTTGTGGCAAGCAG Gene BVV0101_055614 + 0 NULL GK000030.2:99936413-100070404 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252983 1 XLOC_155924 NonCoding TCONS_00252983 XLOC_155924 NonCoding NonCoding - X:100065519-100066023 - TSS190204 504 1 TCONS_00252983_1 40 0.964285714285714 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.82265829958062e-06 0 0 0 0 0 0 0 0 0 0 0 0.000362099912736059 0 0 XM_005220735.1 TNS4 PREDICTED: Bos taurus tensin 4 (TNS4), transcript variant X1, mRNA. 9e-55 217 77.82 0.553571428571429 0 noncoding 0 0 0 0 -0.385454612079754 0.0678953788180987 0.0272423158192326 0.6660749392243 CCCCTGTAATTGATTACTAATCCCTGAGGACACTAGTCAGAAAAGATGCTTGATATGATTCCAATTTCCTTACATTTACCAGTGCTTCAACTTCCCTGTTGGTCCAGTGGTTAAGAATCCACCTGCCAATGCAGGGGATACAGGTTTGTTCCCTGGTCCATGAAGATCCCACATGCCATGGAGCAACTAAACCCATGCACCACCAAAACTACTAAGCCTGCTTGCCTAGAACTTGTGCTCTGCAACAAGAGAAGCCACTGCAACGAGAAGCCCACACACTGAAACTAGAGGACCTGCTGCTTGCCACAACTAGAACAAACCCATGCACAGCAAAGAAGCCCTAGCACAGCCAAAAGTAAATTAATTAATTAACTTACCAAGGCATGATATGTTACCCAAGATGAGACCTATCCTGGAGAATGTTCCACATGCACTTTCATGAAGAAAGTATATTCTGCTGCTTTCAGATGGAATGTCCTATAAATATCAATTGTCTCTCTGGTC TCONS_00247820 TCONS_00247821 TCONS_00247822 . 3' 4380 TCONS_00247820 TCONS_00247821 TCONS_00247822 . 3' 4883 EMBV3_30854 GCTGTAACTAAAACGAATCGTGCATTCCTTCCGGGACCATAGTCATTGTATTCTATTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42838 GCTTTAGGAGGACAGAACGAAGGCCTTCGCGTCTGCGATATTAGCACTGTCTCATCAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07920 GACCCTGCTGGCTGCAGAATTTCTGAAACAGGCAGTTAACAAGATCAAAGAGATCGCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10155 TGGGAGAAGAGTCTCACAGTCTAGGAACAGCCAAGGGCACCTGACAAAGTTCATCTCCTC Gene GeneID:280936|SV2A:NM_173962:10_cdna UTR3_Alt 2 NULL GeneID:280936 3 GENE SV2A KIAA0736 SV2 synaptic vesicle glycoprotein 2A EMBV3_12695 CTAAAGCCTTTAGTGCATTCTCCTCATGCTATTGTGAGGATGAAGTTTTTGCTGCTGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38380 TTACTGCAGAGCTTAAAAGGAGTCTGCCTGCATCCAGTCCTACCTATCTCTGCCTCACTC Gene BVT0102_060858 + 0 NULL GK000020.2:9793745-9843461 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114420 TCONS_00114414 TCONS_00114419 TCONS_00114418 TCONS_00114415 TCONS_00114413 TCONS_00114416 TCONS_00114417 1 XLOC_069291 Coding TCONS_00114414 XLOC_069291 Coding Coding LOC783065 20:9840982-9851337 j TSS85358 3075 1 TCONS_00114414_2 166 0.356422764227642 5 0.703496233339772 0.000114488208123951 0.000805277756216085 0.000122822025853978 0.000221442334927554 6.10092190725416e-05 0.000189612719303342 4.50011277768215e-12 3.46215986104661e-05 8.22188795916183e-17 0.000248320046696904 1.36619907631878e-05 3.02698481867115e-18 2.99200489416619e-09 4.43618477984519e-05 0.000224679763185757 0.0022440115839887 0.00104243243476159 0.000563290895035515 0.000152340903354068 0.000205538768625847 0 0.00101359410674598 3.30685908223787e-13 6.03357421830475e-34 0.000170180644076431 1.3748130261702e-09 0.000236928268944963 4.11841718596772e-30 0.00034665596602366 1.74302273781785e-08 XM_005193489.1 MCCC2 PREDICTED: Bos taurus methylcrotonoyl-CoA carboxylase 2 (beta) (MCCC2), transcript variant X4, mRNA. 0.0 5324 99.97 0.960650406504065 XM_005248567.1 MCCC2 PREDICTED: Homo sapiens methylcrotonoyl-CoA carboxylase 2 (beta) (MCCC2), transcript variant X1, mRNA. 0.0 883 81.93 0.292357723577236 TCONS_00114414_2 sp|Q3ULD5|MCCB_MOUSE MCCB_MOUSE Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; 2e-102 309 92.50 0.957831325301205 1 coding GCTGCGGCTGGAGAGGACCCTGTGCGGCAGACTTTCTAAGAGGTCATGTAAAAGTCTTCTGAAGATTTGCTAGTCCAGAGATCTTGTTTCTAATAATGAGTCATGGTTTATTAATCACCAGATTTATGGTTGGTCGAGACTATGAAGCTGAAGGAATTGCCAAGGATGGTGCCAAGATGGTGACTGCCGTAGCCTGTGCCAATGTGCCGAAGATAACTGTCATCATTGGGGGATCTTACGGGGCTGGAAACTACGGGATGTGTGGCAGAGCCTATAGCCCAAGATTTCTCTACTTGTGGCCAAATGCTCGCATCTCAGTGATGGGAGGAGAGCAGGCAGCTAACGTGTTGGCGACAGTAGCAAAGGACCAACGAGCGCGGGAAGGGAAGCAGTTCTCCAGTGCTGATGAAGCAGCTTTAAAAGAGCCCATCATTAAGAGGTTTGAAGAGGAAGGAAACCCTTACTATTCCAGCGCAAGGCTGTGGGATGACGGGATTATCGATCCAGTGGACACCAGGCTGGTCCTGGGCCTCAGTCTTAGTGCCGCCCTCAACGCACCCATCCATAAAACTAACTTCGGCATCTTGAGGATGTGATTGGAATATAAAGCATCTTCTATTGGACGTGTACTGAAATTTAATATATTTGTAGCCTTAAAATTTTAGACTTTTTCAACATGTCGCTATTAATAGTAAAAGTGTTTTCTTAACACAGTGCATTGTACTTTTCTACCTTTAAACAAAAATCAGTGAAGATATTTATCTGATGAAGTGTCATTCCTTGTAAATTCTCTTAGAAAAAGCTTTCTGTGGCTCAACTCTGCCATGCTTAGAAGGAAGGAAATAATTTAGAGTTATCCTTTCTAAGCCCTAAGAAGTATGAGAAGTTCTGTTATCTGTAAATTCCAGGTATTATTGAGATATTTTAAACAGAAAATTGTATTTTCCCTGAAGTGGTTGCTTTGCCAATTATGCATGGTGATAGGTTAATGTACGTTTTTAAAAACAGCATCTATTACTTTCCCCTGCAGCCACCGTCCTCCTCTCCACGGCATCGACCTTCTGGCTGTCTGCACCCTGGCTTCTGTTTCCTACCCATTCTCGCCTCTCTGGTTTCTACTGTCAGCAGCCCTCCTCTCCAGGGTCACCACTGACCTCCATGTTCCCGAAACCAGTGGGTCTTTTCCCAGCTTTACCTGATTCAGTTCCCTGGAGCATTCACGTCGGTCAGACACTTCCTTCCAGCAGTGCTGTTCTGAGCTTCCACGCTGTAACCTCCCAGCCTCCGAGCCGGTCCTCCTTCTGTTTCCTTTGCAGGCCCGGCTTCCTCTGCTCCTTCCTCCTTCCCTTCACCATTCGTCCTGATTTTTCATTAGCAGTTTGTGAATACATTCTTACTCTAAAAGATACAAATAGCACAAAAGTGTCTCTTTTTTTTCTTTTAACTGTGGCAAAATACACCTTAAAGTTTACCATTTTAACCATTTTCAAGTGTGCACTTCTGTGATGTTAAGCACCTCAACGTTGTTGGTAATCATCAGCACCATCCATCTCCAGCACATTTCATCATCCCAAATTGAAGCTCTGTTATTAAATCATAACTCCCCATTCCCTCTTCTCCCTGCTCCTGGCACATTTCCTTTTTCTTTTTTTAAACTGAGATATAATTGAATGTAACATTATATTAATTTCAGGTGTACAACATAATGATGGGATATTTCTGTACACTACAAAAATGATCACCAAAATAAGTCTAATCATCATCCATCATCATGAACAGTTACGAAATTTTTTCTTTTTTTTTTTCTTGTGATGAGGACTTTTAAGATTTACTTGTTTAGCAAATTTCAAATATGCAATACAGCATTATTAACTGTAGTCCCCATGCTGTACATTACATCCCCAGGACTTATGTATTTTATAGCTGGACCTATGCTGCCTTTTGACCCTCTTCAGTCATTTTGTCCACCCTCACCCCTCTCCCTTCTCACAAATACTAATCAGTTCTGTATAAGCTTGTTTTGTTGTTTAGATTCCACATATCAGTTAGATATGGTGTTCCTCTTTCTCTGACTTATTTCACTTAGCATAGTGGACCTCAGGGTCTACTCATGTTGTTGCAAATGGCAAGATTTTATTCTTTTTATGGCTGAATATTATTCCTCCTCATTCTTAAATGTATGTGTTTTTCATGGCTTCATTTATGCTGTCTGGCCATTCCAGCCCTTCTTTTGGCTTTAGTTACCGTCTAAATGGGGATGATTCCTGTGCCGACAGTTCTTAACACAGCTCTCCCCTGAGCTCCAGACCTCTGTGTCAAACAGCTTCAGGGAACCTCAGAATTCGATCCTCATGTTCAATTGATTTTGCCTCCTGACCATCTCTTGAATTCCTCCACTACTTTTGTCATTTACTGCAGAGCTTAAAAGGAGTCTGCCTGCATCCAGTCTTACCTATCTCTGCCTCACTCTGGAATTAGAATGGCCATTCTAAGGCGCACATCTGGCACGTTGCTGCCTTACTTACATCTTTCACTTGTTCCCCTTAGAAGTGCCAAACCCCTAATGCCCTCCATGGGTCTTGATCATCACTTCTTAAGTCTCATCTCCTTGACTCCTCTTTTCACATTGGGTACTCCTCCCATTCTAGACTTCTTCCAATTCCTTGAACCTAAAAAGTCCTTCCCCTCTTAGAGTCTATGAGGTTCTCTCTACCTGAACTCTTCTCCCTTCTACTTAAACACTTATCTTTTTATCTCTGTGGTTTCCCTGGGCTGGGTTAGACACCTGTTATGTGCTCATGTAGAACACCATTTTCTTCCTCTGACTTACATGTTTATAAGAAATATAAGCATTAAAAAAAAAAAAAAATTGCCCTCCTGTTAGAATGTAAGCTCTGTGAGAGCAGGGATCCTCCTGCTTGACCTGTGTCCCCAACGCCTGGCACTGGTAGGTGCCCAGATACATGTCAAATGAATGAAAAGTTTGTATTTTAATTGTATTTAAAATGAAGTGACTGATTATATGATCTGATACTACTATGAAATGCTTTCCTAATAAAATTAATATTTCAAACA EMBV3_09648 AGGAGGCGCGTGGAGACCATCCTGGAGGAGAAAGTCCACGGCAGCATCTTCCCACGTTGA Gene GeneID:613917|LOC613917:XM_002692243:1512_cdna Constitutive 0 NULL GeneID:613917 13 GENE LOC613917 NULL similar to bA299N6.3 EMBV3_09214 CAAGGAAAGCTTACATCAGCGTATGGTCCTAGAACGGGGAACGTTTTCCTCTGTGTCTGG Gene GeneID:533317|FLVCR1:XM_002694262:251_cdna Constitutive 0 NULL GeneID:533317 16 GENE FLVCR1 NULL feline leukemia virus subgroup C cellular receptor 1 EMBV3_21106 GTACCGGTCCCTTTAGTGCCACAGTTAATGCAACCACCAAGAAAACTCCTCCCAGTCAGC Gene GeneID:526697|CNTN3:XM_002696970:134_cdna Constitutive 0 NULL GeneID:526697 22 GENE CNTN3 NULL contactin 3 (plasmacytoma associated) EMBV3_05183 GGCAGTTCTTTGTGGATTGAGGTAGGAGTTAAATGATTTTCTCCAGTTTAACAGGAGTGC Gene GeneID:541068|SPIN1:XM_002683680:4_cdna Constitutive 2 NULL GeneID:541068 8 GENE SPIN1 NULL spindlin 1 EMBV3_43267 TTCCAGGAAGCCCTGGACCTTTACCACCTGATGGTCTCCAGTGATGAGGTGAACGCCGAA Gene GeneID:530449|WDR62:XM_002694947:68_cdna Constitutive 0 NULL GeneID:530449 18 GENE WDR62 NULL WD repeat domain 62 EMBV3_04140 ACAAAGAATGCCCTGATGGGTTCTTGACAAGGATGGAATTCATGTTCTGGTACTGACCTC Gene BVV0102_235983 + 1 EMBV3_10016 GK000006.2:7208211-7225023 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41366 TGCCATCTTGCCCTTGCATAAGCCAAACAGCATCAGAGTGGCAGAGACAGAACTGCCAGA Gene BVV0102_072446 + 1 EMBV3_06906 GK000010.2:67569960-67575879 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017677 TCONS_00017674 TCONS_00017673 TCONS_00017676 TCONS_00017678 TCONS_00017672 TCONS_00017675 1 XLOC_009082 Coding TCONS_00017678 XLOC_009082 Coding Coding GCH1 10:67574383-67631337 = TSS12035 3173 1 TCONS_00017678_2 249 0.0293098014497321 6 0.944392744894913 0.000130658163614666 4.28973781645307e-07 0.000602206297757689 0.00119302378741195 0.000466796184144669 2.87091419829889e-05 5.83307085408514e-07 2.1822032357661e-07 9.63496100531994e-08 9.91893476051216e-05 6.7959922368828e-08 1.30607864439252e-10 6.24492361109645e-08 1.18171783994549e-06 3.54450551932073e-10 0.00342399806963956 0.000154392790761335 0.00535096056336914 4.96066908017808e-10 3.25396284326541e-10 9.36723156933022e-06 0.00133521533569966 0.0024417616874709 0.00700761883374525 1.02048172537601e-07 0.000350155521044337 0.000112837481808526 1.9860995643774e-09 0.000348295486134721 0.000203448284609922 XM_002690949.3 GCH1 PREDICTED: Bos taurus GTP cyclohydrolase 1 (GCH1), mRNA. 0.0 5573 100.00 0.973526630948629 NM_000161.2 GCH1 Homo sapiens GTP cyclohydrolase 1 (GCH1), transcript variant 1, 0.0 1245 85.05 0.346990230066183 TCONS_00017678_2 sp|P30793|GCH1_HUMAN GCH1_HUMAN GTP cyclohydrolase 1; 2e-168 470 91.20 0.995983935742972 1 coding 0 0 0 0 -0.0108138749740304 0.92808963910346 -1.27136711466384 0.00204311844827325 AGTGAGCGCCGTGACGCCAGGAGACTCGGCCAATAGAAACGCCCCGCGGCGCCGACCGAGCCGCCAGCCCATAAAAAGGAGGCGACACAGCACTCTTCTGGCTCGCCTGTTCCAGACTCGGAACGTGTTGCTGACTCCAGGCCTATCTTCCTCAGGTGACTCGGGTCAGAGCCCACTCCCGGCCCGGGAAGTTCACCTGAAGTCCCTCACGCACCCGAGGGTCCTTCCGGAGCGGCAGCGACGGGTCCATGGAGAAGGGTCCGGGGCGGGTGACGCTGACGTCGCGGGGCGCCAGGTGCAGCAATGGGTTCCTCGAAGGGGAGCCGCCGCGGCCCGGGCCAAGCCCGCCCGCCGAGAAGCCGCCGCGACCGGAGAGCAAGAGCGCCCAGCCGGCGGACGGCTGGAATGGCGAGCGGCCTCGCAGCGAGGAGGACAACGAGCTGAACCTCCCCAACCTGGCGGCCGCCTACTCGTCCATCCTGCGCTCGCTGGGAGAGGACCCCGAGCGGCAGGGGCTGATCAAGACGCCCTGGAGGGCGGCCACGGCCATGCAGTTCTTCACCAAAGGCTACCAGGAAACCATCTCAGATGTCCTAAATGATGCTATATTTGATGAAGACCATGATGAGATGGTGATTGTGAAGGACATAGACATGTTTTCCATGTGTGAACATCATCTAGTTCCTTTTGTTGGAAAGGTCCATATCGGTTATCTTCCTAACAAGCAAGTTCTTGGCCTCAGCAAACTTGCTCGGATTGTAGAAATCTACAGTAGAAGATTACAAGTTCAGGAGCGCCTTACGAAACAAATTGCCGTAGCAATCATAGAGGCCTTGCGACCTGCTGGAGTGGGGGTCGTGGTTGAAGCAACACACATGTGCATGGTAATGCGAGGAGTGCAGAAAATGAACAGCAGAACCGTGACGAGCACAATGTTGGGGGTGTTCCGGGAGGACCCGAAGACTCGGGAAGAGTTTCTGAGCCTCATCAAGAGCTGAGCCTCAGCTTGTGCCACGTGATTTTCAGATCGTGCAGCTAGAAGCGTTGTTTTGTCTGGTCTTAATTGTTTGTACATTCCACTTCCAGTTGTTACAGATGTGAACTCTCATCTTTGTCATTAATTGTATTTAATAATTATTTATAGCAAGTCAAATAAAAGTAATTAATTAAGGGGTGAGCCCTGAATTTTCTTCTTGCCACCTTTTAGTGGCAACATTCAAGAAAACTGCCAATAGTGTAAGTTGCAACCCCATGGACTATAGCCCGCCAGGCTCCTCTGTCCCTGGAATTCTCCAGGCAAGAATACTGGAGTGGGTAGCCATTCCCTTCTCCAGGATAGTGTAAGTTACTTATATAAAACCCCTGCCTTTCAGGTAACCTGAGGGTGCTGGGAAGGGAGAAGGATTCGTGTGTTTTGTTCAGAGTATGGTAATTTGATTCAGAAGCATAGCAATGTTGGGAATGGGAGAAAATTATGGTCAGTATGTTTATTTTACCCTCTCCAAACAAAAATGGTGTCATGCTTGAAATAATTTATATACAGTGTGCAGCATTGCTCTGCAAATTCAAAATCCAAAAGGCTCCACTTTAATCATGATTATTTAACCACCAGTGACACTTTATTTTTTATATATTTTTTAAACTATCCAGTTGTAACATGTCACCAAGGGAAGGTAAGTGGAATATCTATGTATTTTAATTTCACTATGAGTTAAAAAGGCAATTTCTACCTTCTGTTCTTTTTAAAATTCAAGTACAGGAAATTAGTTCCTGGAGTTGTTTACGAGTATATTCTCATGTCAATATACAGGGATTTAGACATTTAACTCTCTGTGCCTTGAGGAGAATATCACACCATTTAGAGTGTAGATACCTTTGCCTTTTTTTTTAAAAAAGCCATTATTTTATAAGACTTAGTCCTGACATTGCAAATAACTAGTTCTCACAGTTCTACCTTTTCATTTTTCTTGGGAGCTTACTTTGTGAGTTCCTTGTAGATGCCGCAAAAAAAAATTTTTTTAACCTATCAAATATTTTTCTAAGTATTTACAGAAACTTTTGAAAGTGTCCATCATTTTCAGGTTTGCAGAACCATAGCTTCCGGGAGCGTGAGAGAATGCAGATTGCACACTGAACTGTTTTGAGCTCTGTCCCATGTCTAATGAAAACGATTTTGTTGGTGTCTGTGAAAATGCACCATCATTTTCTGGAATGAGTGTGAAATACTGGAAACTGGTATACTAGTTTCCCGTGTGGTCCAAGTGGATCTTATCTTTGGTGTGACTGTTCAAGTGGGATAGGTCTTTTAGTCCAGGAAGCTGCTGCCTTATTAATGATTATCTTAAAATTTCCTCCACTGGGGCAGTGTGGGCCAAATCGAAACAAACAACAACAGCTAAAAACCCCAACTCTCTGCAAAAACAAACACGGTTATTCCATGGAGAAGTCTCTGACATGGAGAAGGCTGACACTGTGCTCTTCAAATTTATCCTGCTACCTTAACAAGGATTAACTCCATACTTGCTGTAACTCTGGCAGTTCTGTCTCTGCCACTCTGATGCTGTTTGGCTTATGCAAGGGCAAGATGGCAGAGGTGGGTTTTTGTGTGTGTTTTTTTTAAATTTTAACTCTTCCCTACTTCTAGTTCCTTTTATTTTTTTCTATATTTGGAGTTTCTAAAGTAGTTTGGTGGTTGATTCTGAGTTCCTTTTAAAATCTAACCTGATATAGACATTATCCTGTTTAAAATTTAGACAGAGATAGAATTAACATTCATCTCATGCTTAATATTTTAAAGTTTTTACAGCTGTGACTTGGAGGACCAAAGAAATTGTTAGCTGTTAATTCATCTTCCTGAAATCAATTGTATTCCTTTTTAACTCTTTAAGATTCCCTAGAAGTGTTCTCATAAAAGTTTAAAATATCCATGGTATCAGTCTAGAGTATTGGTAAATGCAGAGTAACTACCTTGTCTGTTTTACTCTGGTCTGTAAGTTATTCAAAATTACCTTTTCATATCTGTGGCCTTGAGTTCATTTCAGAAGTTTTTAAGAATTTGATGCATTTAAATACACTATTCAATTTAATTGTTCAACTTTTATGTATGGTGTATATTGTTCCTGAAGTTGGTTTTATTTAAATTATTAAACTGTTATGACTTTGTTCTTGTGAAA EMBV3_23934 GTTAGCCTCCAGCAACACCGACTTCGCCTTCAGCCTCTACAAGCAGTTGGCTTTGAAGAA Gene GeneID:786621|LOC786621:XM_002707715:92_cdna Constitutive 0 NULL GeneID:786621 11 GENE LOC786621 NULL similar to Endopin 1b EMBV3_34389 GCTGAGAATGGTTTTAAGCCTCCTGATCTGCTGGGCATCCGCGTCAACTGGGAAAATCGA Gene GeneID:537960|ATP1A4:NM_001144103:323_cdna Constitutive 0 NULL GeneID:537960 3 GENE ATP1A4 NULL ATPase, Na+/K+ transporting, alpha 4 polypeptide EMBV3_31342 AGTACTCCAACGAGGATACGCTCTCCGTGGCGCTGCCGTACTTTTGGGATCACTTTGATA Gene GeneID:782525|LOC782525:XR_083733:105_cdna Constitutive 0 NULL GeneID:782525 8 PSEUDO LOC782525 NULL similar to Eukaryotic translation elongation factor 1 gamma EMBV3_02631 CGGCCGTCCGCCAGTACCTGTTTTCACTCTACGAATGCCGTTACTCTGTTTTCTTCCAGT Gene GeneID:538625|PSMD6:NM_001034649:5_cdna Constitutive 0 NULL GeneID:538625 22 GENE PSMD6 MGC127495 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 EMBV3_02091 TGACTTGGGAAACTAGGAGCACTCTCTTTGGTTCTTAACTTTAGTGAAGCATGCGATGGG Gene BVV0102_057077 + 0 NULL GK000001.2:71721213-71789636 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001073 TCONS_00001075 TCONS_00001074 1 XLOC_000252 Coding TCONS_00001075 XLOC_000252 Coding Coding FBXO45 1:71710247-71725229 = TSS520 5235 1 TCONS_00001075_3 281 0.058261700095511 3 0.65075762632668 0.00181150921753701 0.00170899997929176 0.00159763496329294 0.00147302286747622 0.000300815917665458 0.000605134904735675 0.00213500772618949 0.000403683036549292 0.00275050242013925 0.000259653284100714 3.02797432576299e-05 1.4893199182644e-07 0.000186972427616027 0.000587963811436762 0.00108279589765723 0.000689738733292311 7.30654761924142e-10 1.88823363235682e-07 0.00170580420856262 0.0027561271315841 0.000711140852793025 5.60252216218176e-08 0.000216129254889822 1.25411363766559e-07 0.00194371364546702 0.000932807738340142 0.00156937417531926 6.55607828177209e-06 5.96314727425368e-05 1.36058915155806e-07 NM_001206758.1 FBXO45 Bos taurus F-box protein 45 (FBXO45), mRNA. 0.0 2035 100.00 0.215281757402101 NM_001105573.1 FBXO45 Homo sapiens F-box protein 45 (FBXO45), mRNA. 0.0 4360 82.75 0.81127029608405 TCONS_00001075_3 sp|P0C2W1|FBSP1_HUMAN FBSP1_HUMAN F-box/SPRY domain-containing protein 1; 0.0 516 99.20 0.882562277580071 3 coding 1 0 1 1 0.134525210350516 0.309360488326558 -0.113170078598635 0.118423902520206 TTTGGAGGGGCCGGGCGGTTAGCTGTGAAAGGGGCGGTGAGCGAGCTGCTCCGGTCTCAAGGCGAGGCTTGGCCTCTGGAGCAGAGACGGGGGGAGGCGGCGGCGGCGGCGGCCCTCGGGCCGGCTGGTGAGGCGATGGCGGCGCCGGCCCCGGGGGCTGGGGCAGCTTCGGGCGGCGCTGGCTGTAGCGGCGGCGGCGCGGGCGCCGGCTCGGGCTCTGGGGCCGGGGGCCGGTTGCCCAGCCGGGTGCAAGGGTTGGTGTTCTCCTACCTGGAGCTGTCCGAGCTGCGGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTGCACGGCGATGAGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAGCCTGGCAGAGGAGGCTCTGCGCACGGACATCCTCTGCAACCTGCCCAGCTACAAGGCCAAGATACGTGCTTTCCAGCATGCTTTCAGCACTAATGACTGCTCCAGGAATGTCTACATTAAGAAGAACGGCTTTACTTTACATCGAAACCCCATCGCTCAGAGCACTGATGGTGCAAGGACCAAGATCGGTTTCAGTGAGGGCCGCCATGCATGGGAAGTGTGGTGGGAGGGCCCTCTGGGCACTGTGGCAGTGATTGGAATTGCTACAAAACGAGCCCCCATGCAGTGCCAAGGCTATGTGGCATTGCTGGGCAGTGACGACCAGAGCTGGGGCTGGAATCTAGTGGACAATAACCTACTACATAATGGAGAAGTCAATGGCAGTTTTCCGCAATGCAACAATGCACCAAAATATCAGATAGGAGAAAGAATTCGAGTCATCTTGGACATGGAAGATAAGACTCTAGCTTTTGAACGTGGATATGAATTCCTGGGGGTTGCCTTTAGAGGACTTCCAAAGGTCTGCTTATATCCAGCAGTTTCTGCTGTATATGGCAACACAGAAGTGACTTTGGTTTACCTTGGAAAACCTTTGGATGGATGACAGTGGCTTTCTTGGGATGAAAGACAGAGTGGAGGAGATATCTGCTTGTGGGAAGTAGAATCATGAAGTGACAGTGTCATACATGCATGCCCACGAAACATCCTGAAAAACACATGATATTGTTAACTGGAGAAGCAACTCTACAGCAGAGATGATCTTAGTGTTTCCTCTTTCTACTGGGCCAGAAAAATCCTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTTCAACAGATTTTGTCTCTAAGTTAACAATGTGTTATTTCCAACTTTTAAGGTGAGATCATAGAGATGGTGTCAAAGGGATAAGATAAGGAACTAGCAAGAGTTTTTAAGTAGTGTGTTTGTGAAGAAAGATTGATCCTGTTTTACAACTGCCTGTTTTTTCTCCAGACCCTTTTTTCCAACCAGCTTGACTATTGGAAAAGTATGAAACTGGTTGGGTTTTATTTAATATTTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAACAGTGAGATATAAAATTGTGCAGCTATTTTAAAAGTTGTATATACAGTATGTGTGTTAAAAAAAAAAAAAAAAACTGTTAAAAAAAAACAGGGCAAAGGAGTTGCTTTGTTCTAGTTCAGTTTCTTAAAAACCACTACATGGTACAAAATTAGAAAAACATTAGGGACAGTTTGGTAACTACAAAGAAGAGGATTTTAAGAGAAGATGTGTTGTATTGGCTCGTTTTGTATTATATTTGGCTTACAGTTTCCATGACTGTTACAGTCTGATTTATTTTTTAACCATCAAAATTATTGTAAAGGTCCCTCGTCTCCAGGCTAAGATTGAGGAAAGGCAAATCTATTTCTAATCATACATATATCAGTAATAATAATAATGTGCATCTTATAGTATCTGGTTTTATTTTTTTGACCTTCTGAGAAAGTGTCTTGTAAAAGAATAAAGAACGTTGCCATTTGTTCTTATAGGCCTCAAATATTAAAATTGTTAGTCACAGACCTTAAGAAAATAATTGATCAATGATCCTTTATTTTGTAACTTTATAATGCTGTAGATATTATAATCTTTTTAAGTTCATATTGTTTACATCAGGCAACAGTCTAAGCCTCAAACTTGTCATTGGGGTTGTCAAGAAAATGTTTACTCACCCACCTGAAACAGTGCCAGCCTGAACCCAGCTTAAGAATGTTCTTAATCTCATTATAGATAATTGCCCCCATGGGACTTGAAATAAAAGACCTTATGCTGGAAACTTTAGGTTGGCAACATTTTGAAGGTTTCATTGTAGTAGAAGAGTTTAACATTAATTCCTATTCAGAATTTTTGACTAATCTGATTTCACTAATACTTTTTCAAATTAATAATTCAACATACATGAACTGAAATTTTCTTTTGTTAGAAAAGAAACAAATATCTTTCTGTATGAAAGTATAAATTGTATGGTTTCAGATACATCTTTGTGATAAGAATTGACTAAGGCAAGTGGAATCTTTGTACTTTTTAGGTTTTGCTATATGCATATTTTGTTTTGCATCTAATAAAGTTAGGGACAGCAAGCAGTTGGCTGGGGTTCTTGGGTTGCTCCTTGAGAGTTAATATTATTAGTACTCCCACGAAGCAAGGGATTTCAGTCATGAGCAAAGATTTCATTTTTGCCACCTAAAAAGTGTACACAAGTATTTATTGTATATTTGGTATGTTGCTTAAAGGTGAAATCTGTAAAAGGTCCTTTTTGATACCCACATCAAGGAAGAAACTTCCTAGAAACCATATTTAATACTACAGAGTGAAATTATATGTTAAATGTATTAGAGAATATAGCTGCTACAGAAATGCATTTTTTTCTTGGTGTGGAACAACTCAGTTTGGCAAAGTTTAAAATTTAACTAAAGAAGAGACCTAATTCAGGATAAATATTGAACTAATTAGAAAACTAGATTGGGATATGATCAATTCCAAGAGCTTTTGCTCAGAGCTTTTTTTATATCTTATGTTTTGTCTTATTAGTGAACATTCATTTGTAACAAAGTTTTGAAGGTGCTGAGTGAAAAACAGAAACACGTGGTTATTGCATATTGAACCTAGAATCAAATAATTGCCTAAATATTTAACAAAAAGCCATTCTTCTCTCAGAGATTTAAATTCTTTAATATCTGATTTGCAAATTTTATAAAATGGAGGTTCTTATTTAGCATGAGCGTCAGGGGAGTAAGGAGCTTTCCTTTATAACCGGGTAAATTGTTACTGGATACCAATAGTAGTTGTATAGAATACTAAGACAAACTGTTACAGTGTTTGAGGAAATGGAGTCTCTTTTTCACTGCTACTGAGAGAGCACTTAAGTAGAAGACAGTTATGTCTGAATATTAAATATAAATAATCTAAACCAGTGGTTCTCAACCTTAGCTATACTTTGGAGTCATATGCATTTTGGAAAATATTGATATTTGGGTGCCATACCCCTAAGATTCTCTTGTTGGTCTGGGGTATGACATGACCATAAGGATTTTAAAAAACTTCCTAGATGATTTCAGTATGTTGTCAAGGCTGAGAACCACTGATCAAAATACAACTTAAGTTTTCTCATCTGCAAAAAAAATCCTTGCTCCCTCCCTTCACTACCTCACAAGGATATTGAGGGTAAAGAAGAAAATAATGGGAAAGTGCTTGTGCTGTGGATAAAAAGTGCTATTGAAAGGCAAAGTTGTATTTGTTGTATTTCAACTGAAACTGTGATCAGGAAGAAATGTGTAATTGGATCTGCTCTGTTGACTTGGGAAACTAGGAGCACTCTCTTTGGTTCTTAACTTTAGTGAAGCATGCGATGGGTAAGAAAACATTACTCTTATTCATACTATGGTCTTCTGTCATACTTGAGATAGACTGGTTTAATTATCTGGTTTCACACAGGAAAGAAGAAATATTAAGGTTTAAAGTCTGTAATGGTCAATGGTTCACAATTCATTAAAACTTTTCATACAAAGAGTTCTGTGGTTAATATATATCATTTCTTAGTTGCCATTATTTTTTCATTATCTGACTTTTGAATGTTAAACCACTGATTTCATCTCCTTCATTCTTATTCCTGTAATTTTGGATATACATTTGACAAGGCATGTAAAGCAAGTAGGTATTGCTCAGTTGAATACTTAAAAATCGTGGTTCTATGATTAGGCATCTTCTGCCTTTTAGATATGATTTGATCAGAGAGAGTTTTGAAAATAATAGGGCCCTAACCCACATAGTAGGTATTATAATTAACTTTTTATTTATGTCCTCAAACTGCTGTTTATATAGACTGTAATATTTATATTTTTGATCGCTTTAAAAAATGAACAGTTTGATAGAAACTTGAGTTTTAAAGATCAGTATTGAGATTACTTTCTAGAAATCAAGATCACCACAGTCAGAACCACTATAAAGCCTTCTGAGAAGGAACAGCCCATACCCAACCCAAATGTTATTCTAATAAAGCATTCCTCAGTTTCTCTAGCTGAATGTAATCTCTTCTTCCTTAAAGTTTCCTAGTCTTTGTATTTATCTATACTTAACTCATGCTGTATTACTTTATAACTTGTATAAATTTATTTATATTTATTATTTGTTCATGTCTTATCTTCCTTAAACACATTAAGAAGGAATCTCTGATGTATTCATCTGTATACCCATGTCATCAAACCCAGTAGGCAGGGAATTGCATATTGCATATATGCTATAGGAAGAAAACACCTTCTCTGAATTTATAGGCTATAATAACAAAAGATAGATGAGAAAAATTTTTGTATCCTGTCCAAATTTTTGTATCCTGTCCAAATCTGAGGCTTGTAAGGAAAAAATAGTGACTGTGAATGCATTTTAGCCATTCCCCTTTATTCTTGAATATCGCTAAACTCTGCTATTTAGTTCTTGGTGTAGATTTCTTATTTGTTAAAATTAGAATTCTGTATATTAATTTTTTGAAATTCTTTTTTGCTTTAGTTTCTTAATAAAAGTTTAAACAAACATTAACTATTTGTGATTGCTTACATTTAAAACAAGGAATTTTTTTATACTTTGGTCAGAAAGAAAAGCAGGATACCTTCATAGCCAAATGTGTTGATGGAATTTACCTATAAATTCCATGGCTTTTAACAATGGAATCCGATTCACTAGGATCCTGTTTTGTTGTCACCTCCACCCCCAGCTAACAGTTGTTTGATAATGCAGTTGTTTGCCAAGAGTTATAAGAAGTACAAGAAGC EMBV3_24883 AGACATACATTCCAGACGGCATGACAGGCGCTCTGAGGGGCGTACTCACAGGAGTAGAAG Gene GeneID:534630|LOC534630:XM_002699903:154_cdna Constitutive 1 NULL GeneID:534630 X GENE LOC534630 NULL similar to RNA binding motif protein, X-linked 2 EMBV3_18804 ATGGCCCAACTAGTGCTTCTGGCGATGAAATTTCTAAGCTACAGCGTACTCCAGGAGAAG Gene GeneID:536793|FXR1:NM_001038562:43_cdna Constitutive 0 NULL GeneID:536793 1 GENE FXR1 MGC133793 fragile X mental retardation, autosomal homolog 1 EMBV3_00313 TCACAGGATACATGTGACTAAAACTGACTCATGAGTCTCTACAGAGTATCACTGATGAGC Gene GeneID:511378|TMEM97:NM_001034403:100_cdna Constitutive 1 NULL GeneID:511378 19 GENE TMEM97 MGC128928 transmembrane protein 97 EMBV3_34383 GAGATCTTCCAGCTCCTGAGGAACATGCAGAAACTCAAACAGAAGAATCAACAGCTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19540 GCAGCTACCTGAAGTTCCCCACCTACGCCAAGTCCACGAGAACTACTGATGAAATGACCA Gene GeneID:528860|CHST11:XM_002687643:810_cdna Constitutive 0 NULL GeneID:528860 5 GENE CHST11 NULL carbohydrate (chondroitin 4) sulfotransferase 11 EMBV3_00993 GAGATGCTCCAGACATGGCCACTGCAAGCAGACAATACACAGAAAAGTCATGAGACTGGC Gene BVV0102_191948 + 0 NULL GK000014.2:14953754-15083192 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08593 ATGCCGCCCTGTGGGGGTCGAGAATTCAGGGAGTACTGTCAAGCCCAACAGCCCAAAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28796 AAGAAAAGGGCTACAGTTCTTAGCAGGAGAGAGGGCGAGGAGTTATCAGGAAAGCTGCAG Gene GeneID:615271|LOC615271:XR_083727:29_cdna Constitutive 0 NULL GeneID:615271 7 PSEUDO LOC615271 NULL similar to heterogeneous nuclear ribonucleoprotein A3 EMBV3_14806 GTGACTTTCGTGGCCCGCAATCGCAGTGCTTGTACTTACCTCGCTTCCCACCTTCAGCAG Gene GeneID:504282|PLK3:NM_001075153:53_cdna Constitutive 1 NULL GeneID:504282 3 GENE PLK3 MGC142543 polo-like kinase 3 (Drosophila) EMBV3_39646 TTTGTCGCCCTGTGCACTAAAGAGCCAGATATTCAGCAGCCAAGGACATCCATACCCAAG Gene GeneID:533945|CNOT2:NM_001103277:7_cdna UTR3_Alt 3 NULL GeneID:533945 5 GENE CNOT2 MGC140232 CCR4-NOT transcription complex, subunit 2 EMBV3_32586 AAACCATTATCTCTGAGGGACTTCTCACTTCGGTGGCAGATTTCCGTGCTCAACTAGTAG Gene GeneID:538915|WDR43:XM_002691448:273_cdna UTR3_Alt 2 NULL GeneID:538915 11 GENE WDR43 NULL WD repeat domain 43 EMBV3_41834 GTTTTTACTTTGTCTTTTGCTATCTGTGTTATGACTCTGTGGATTTGTGTTTATACAGAC Gene GeneID:534770|HNRPDL:NM_001083725:22_cdna Constitutive 2 NULL GeneID:534770 6 GENE HNRPDL NULL heterogeneous nuclear ribonucleoprotein D-like EMBV3_04070 GATAAGACAGACTTGTTCTCCTGTCTGGTGATTAGGATGAGGACACCTGGGCAGCCATTG Gene GeneID:516085|CYP4A22:NM_001098990:179_cdna Constitutive 0 NULL GeneID:516085 3 GENE CYP4A22 MGC159729 cytochrome P450, family 4, subfamily A, polypeptide 22 EMBV3_20841 TGGTCTGGAACTGAAGACACTGAACAATGGTCCCCAGGCCCCAAGGAGACCTGCATCTCT Gene GeneID:539523|LOC539523:XM_002692277:1619_cdna Constitutive 0 NULL GeneID:539523 13 GENE LOC539523 NULL similar to mCG50094 EMBV3_39205 CGGAGGCCTCAAAAAGTGTAAAATCTCCAGGTGTGACTGCACAGAAAAGTTACAGAACAA Variant GeneID:508759|DCUN1D5:NM_001046012:8_cdna 385^639 3 EMBV3_03988 GeneID:508759 15 GENE DCUN1D5 MGC137775 DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) EMBV3_43669 TGCTGTTGCAGCCTTTTCCAGGCTCACCAGGTGCTGACTGTAGACGCCATGTCCAAAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10981 GAGCTCTTCAGCAGTCTGAAGAAGGGGAAGAGCCGTCTGCAACTCCTGTAGCATAAAGAT Variant GeneID:518761|SPIRE2:XM_002694865:830_cdna 160^227 1 EMBV3_28657 GeneID:518761 18 GENE SPIRE2 NULL spire homolog 2 (Drosophila) EMBV3_11643 ATGGCCGGGATCTACTACATGTTAATGCAGGTTTTTAAGGAGGAGAAGTACCTGAAGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35190 TGTAGCTGAAGAGCAGGCACAAAGACGTGCCCAAGAGGATGCTGTGTTCTAACAAAAGGC Gene GeneID:100296495|LOC100296495:XM_002691962:6_cdna Constitutive 0 NULL GeneID:100296495 12 GENE LOC100296495 NULL hypothetical protein LOC100296495 EMBV3_22153 AAAAAGGGTGGTTAGGCAAAATCAGCCATCATCCTACAATGTTAAAGGTAACCAGTGTTA Gene BVT0101_010539 + 0 NULL GK000005.2:68097173-68109726 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195431 TCONS_00195436 TCONS_00195430 TCONS_00195432 TCONS_00195433 TCONS_00195434 TCONS_00195437 TCONS_00195435 1 XLOC_118044 Coding TCONS_00195433 XLOC_118044 Coding Coding NFYB 5:68108133-68127955 j TSS145636 2921 3 TCONS_00195433_3 86 0.148236905169463 9 0.853085111750164 0.00112580826421529 0.0010136774302611 0.0012830942622955 0.000658756930965119 0.000901477835346885 2.51187081943161e-09 0.0013237025244965 0.00085837057068892 0.00172759603613381 8.7724870758756e-06 9.18918434245295e-06 6.99227976492098e-06 0.000140035559567175 0.00076787345575776 4.4128151054157e-09 2.64377783183252e-08 1.58721780618873e-07 0.000573834142670694 0.000791643727332955 0.000547321753642766 0.00049947746443468 9.56872017005297e-05 0.000265163802845465 0.000136829590119809 0.00075483414720101 0.00198098437434387 5.68235498101524e-08 3.88508261939926e-05 1.83077407161394e-09 1.39229434148424e-05 XM_005206682.1 NFYB PREDICTED: Bos taurus nuclear transcription factor Y, beta (NFYB), 0.0 3871 100.00 0.734337555631633 NM_006166.3 NFYB Homo sapiens nuclear transcription factor Y, beta (NFYB), mRNA. 0.0 2803 85.92 0.816501198219788 TCONS_00195433_3 sp|Q32KW0|NFYB_BOVIN NFYB_BOVIN Nuclear transcription factor Y subunit beta; 3e-56 176 100.00 0.988372093023256 0 coding 0 0 0 0 0.667624507089031 0.173706642712709 -0.042107837165311 0.40800164120029 AGGGAAGCGGCCCGCGGCGGAGGGAGGGGAGGCCGAGTCCTGGAAGCGGAGCTCCGCGCTGGGACTGGTTCCTTCGCAGCCATTTTCTGTCCAACCAAACAGCCGATTGGAGACGGGAGCTGACCAGGGCTGCATTGGAGGGTGAAATTGGGCAGAGATTAGACACCTTTTTTAGGCAGGTGTTCTTGAGTACCACTGACAACACGGTTCTCGCGTATTTCATGACAATGGATGGTGACAGTTCTACCACAGATGCTTCTCAACTAGGGATTTCTGCAGACTATATTGGAGGGAGTCATTATGTTATACAGCCTCATGATGATACTGAGGACAGCATGAATGATCATGAAGACACAAACGGTTCAAAAGAAAGTTTTAGAGAACAAGATATATACCTTCCAATTGCAAATGTTGCAAGGATAATGAAAAACGCCATACCTCAAACGGGAAAGAGAAGCAGGACTTGAGTCTAGCCCACAGTACACTCCAGACATAACAGGATTGATTTTCTTGAGCATTTGATTGCAAAAGATGCCAAAGAATGTGTTCAAGAATGTGTAAGCGAGTTCATCAGCTTTATAACATCTGAAGCAAGTGAAAGATGCCATCAAGAGAAACGGAAGACAATCAATGGAGAAGATATTCTTTTTGCCATGTCCACCTTAGGCTTCGACAGTTATGTAGAACCTCTGAAATTATACCTTCAAAAGTTCAGAGAGGCTATGAAAGGAGAGAAAGGAATTGGTGGAGCAGTCACAGCTACAGACGGACTAAGCGAAGAGCTTACAGATGAGGCATTTACTAACCAGTTACCAGCTGGCTTAATAACTGCAGATGGTCAGCAACAAAATGTTATGGTTTACACAACATCATATCAACAGATTTCTGGTGTTCAGCAAATTCAGTTTTCATGATCTGAAGAAATGATGGAACGGAGAGTATGGAAAAACAAGTCTGTATACAGATTCTGGAACAGAGACATTAGAAGGAACTGACTGGTGAAAAGATGTCTCTTTGTATATTAAATAGCTGTAATGTAGCTTCCCAATGCTTGACTAATTGAGGTGTTAATTCTGACTTGAGAATCTTTTTCATGAATGATTTTAAAGAAAAATTTGGATTTTAAAGGTATTAAAATATTTTTGTTTTGTACGAGAGTTTGTTGCTCTGTATGACTCCTGTATGCATTGTATATTGCAATTTATTACTGTCAGAGATTTGTAGACAGTTTCTTATTTTCATATTGAATCATGTTACTTTTGTAATTCAAGTAAGCAGCTGGGTTAATTCATGATGTTTGCCCTTTTAATAAAATATAAGGGTAGAGTTCATTTTGAATGCAAGTTGCCTTTATTATAAATTTGAGTTTGTCTTGGTTATATAATATCTTGCATGATAACCTAGCTAGCTTTTTAGCATTTGCCATATTTATTAAAAATTAACTTTTTTTGTAAAACATTCATAGCTTAAACAGTACCATTTTTTTTTTAATGTAAGTGAGAGATTAAGTGTGAATGCAGAAGCAACTATTGTCTGCCCTATTCAACTTGGTGCCCGTTAACAGTGTTTACACTGTTCCTTGTGCCTGTTAAGATAGTTTTAGTTTATTGGAGCTTTTGTTAAGACAAGATTTGTTTTCGAGTTATATTATTATGAGTGTTGGAATTCATAAGTTTATTGTAGTCCTAGTGCTCTAGAAATGGTGCCCCTTTCATTTTGTGTATGATTTTTCCAAAGCATATCTTCAAATACTACATAATACCCTCTTCCAGAAGAGGAATTTTAGTCTGATGGTAAATGTCCTCATTTTACCTTTTTAATTGAAATGTCAAGTTTCCTAATATACTATGGGAACCAGGAAATGTCAGACATCATTGTGTGTGTACAGACCTTTTTTGCATGGGTGAGTGAATGAAATGAAGAGCAGAGTGAGTGCTGTGAATGGTATGAAAGAGAAGCTGCCAACTTCTAGTGTGCTGTCTTGATCTTTGCAATAAACTAAATTTAGATAATGTAACTTTGTATAATTTAATAGCACTGCACTTGGGTTGTTGCTTTTTTAAAGTGAGGAGATTTGTATTTTCTCACCTGTTCTTTTTGGTGATAATTTTTTAATCAACAATTGCTCTTGTATAGTTTGCCTAAAAGACACTTTGAGTGACTGTCATCTTGAAAGAACACTCAAATTTACAATGGAGAAGCAATTTCCCAGATATGGGCTGGACAGAAACATTTTCTTTGCCAGAAGGAGGTTTTGAGGGCACAACTGGGATAATCTGAAGTTAATAACTCCCGCTTTACCTTCCCATTTAAAGAATAATCTTCATTACAGAAAATTCAAATAGGCAAAAAAGGGTGGTTAAGCAAAATCAGCCATCATCCTACAATGTTAAAGGTAACCAGTGTTAATATTTTGGTAAATATTTGTCCTTTTACTTTGCTAAATATGTATATTTTTTATAAAATGGGCTCATACTTGCATACTGTTTTGTAACATGCTTTTTTCACTTAACAATATATTGTGAACATCTTTCCCAGGTCATTACGTAAGTTCTACTTTAATTTCTTTATTATTTTGTTGTATAGCTGAAACATAATTTATTTAATCCTCTGTTGGACATTTTGACTATATACATCTTTTCAGTTATAAACAACACTTCACTGAATCTTGTGTACATACATGACTGTTTTCTTCAAGTTAATTCTATTAGCAGAATTGTTGGTTTAATAGATATGCAAAATTAAGGCTTTTGATGCATATATAATTGTATTTTTGAAATATCTTCTATTTGATCCAGGCAGTATATCATTATATAACTGATAAAAGCACTTGATCTTTGGTTATCAGCTTCTTTCTCTAAAGTTTAAAGATTGGGCTGTTTAAGAATCAAGATAAAAAAGGAATTGAACAACTTTAAAAT EMBV3_17193 AGCCTCAGCGGTTAAAATGAAGGGGAAGGAACCCTCATTTCGGACTCCCAGTTCTCAGAT Gene GeneID:504742|CITED4:NM_001080726:62_cdna Constitutive 0 NULL GeneID:504742 3 GENE CITED4 NULL Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 EMBV3_20400 AAACGGCGACAGCGAAGGGAATCCAAGGAGGTTGGCAAATAAACAGGATAAGGAAGGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08759 GTGCAAATCCTGTCTTCCTATAAACTTTCACCCAATGGATTTAGCATCAAAAATGCTCAG Gene BVT0102_112062 - 1 EMBV3_41774 GK000005.2:93898655-93926898 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00719 GGCTCCAGCTCCGAGCCGCAGCAGCTTCAGCACACAGATCCACGTGGTCTCGGCCGCTCA Variant GeneID:509816|MRPS11:NM_001035078:17_cdna 219^317 3 EMBV3_15379 GeneID:509816 21 GENE MRPS11 MGC127419 mitochondrial ribosomal protein S11 EMBV3_37702 CCAGTCAAGACCATGGATTGGGTGACTGTTCAATAGATGACCATTTGACATCAGAGGGCC Gene BVV0101_074614 + 0 NULL GK000004.2:71189110-71278462 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184480 TCONS_00184483 TCONS_00184482 TCONS_00184484 TCONS_00184481 TCONS_00184479 1 XLOC_111355 NonCoding TCONS_00184479 XLOC_111355 NonCoding NonCoding - 4:71195937-71204997 - TSS137373 1012 2 TCONS_00184479_1 50 0.839920948616601 3 0.888619052875593 0 0 7.31530739084769e-05 0 0 0 0 5.83844436633685e-07 0 0.00026666906008407 0.000594805346195082 0.000455512609306606 0 0 0 0.00415302639320101 0.00980195554255888 0.000757339129225969 7.16511935362793e-08 0 3.05532657114656e-08 0.00473348527950156 0.00718361799004462 0.00262136919486942 0 0 0 0.00146604733392221 0.00268021602513944 0.00481433100474122 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 2e-36 158 89.52 0.121541501976285 NR_003572.2 RPL23AP53 Homo sapiens ribosomal protein L23a pseudogene 53 (RPL23AP53), 1e-06 59.0 75.29 0.08300395256917 0 noncoding 0 0 0 0 0.0396299870546889 0.832287783741594 0.0293416504686473 0.559271107170074 AGTAGAAGCTTGAAAGGTGAAGGTCTCAGTTAGGAGGAAGGGGCAAAGTTTGTGCCCAACACCTAGCCCTTAAGGCATCTACCACGTTTTCAACAAGGCAGGAGTCTAGGAAAGCCAAGCAGAAAGACTCTGAAGAACAGACTCAAGTTTGCATTTGTCTTGCACTGCTGAGGAGACAAGGGTAGGAGTCGAGATTCACCTTGGGATGAATCCAGTCAACTCCCCAGGCACTGCTGAGGGAAACCTTGGACCACTGGACAAAACCTCGAGAGGGATTGTCAAAAGATCCTCTGACCAGTCCTGAGGAAATCTGGTACACTGATGGAAGCAGCATTGTCTTAGATGGAAAAAGAAGAGCCAGGAACATGGAGCTGGTCATACCCAAATTAAACCAGTCAAGACCATGGATTGGGTGACTGTTCAATAGATGACCATTTGACATCAGAGGGCCAAAAACTTCACCCTCAGATCATGTTAATGACACCATTTTCTGAACATACATCCCATGAAGAAGCATGTAACCCAGATACATCTGTGCAGAACCCCAATTACTTTAAGTTTTTCTTCAGTCATCTTTCCCCACACCTCAGACCACCCTGCTTCCTTATCCCACGAGTATCTTGAGGCCCTCACCTTCATGAAATTGGATTAAAGACTTGTTCTCTTGTCTCCGTGCTTGGCTGCCTTGTGTATAAAGCCTTTCTCTGCTGCATACCTTGGCGTCTCAGGATTTGGCTTGATGTGAGTCAGGCAAATGAACCTGGTATGGTTCATAATATAAGGGATGGAAATATCAGCTAGGATTAGAATCAGATGCATGTAACAGAAGCTGAAACAACAGTGGCTTAAATAAGAAGTTTGTTACATTGTTCAAGAAGTCTGGATTAGTATGACAGCTTCAGCAGATCACCAGTACTCTAGTCCTTCCACCTGTCTTTCTGCTCTGCCATCCTCAGGTGCATGGCTCCATCCTCAGTGATGCAAGCCTGAGATGGCTGCCAGCAGTTGTGCA TCONS_00181974 TCONS_00181977 TCONS_00181976 r 3' 491 TCONS_00181974 TCONS_00181977 TCONS_00181976 r 3' 1141 EMBV3_30011 GCCAGCGTGCCCCTGACCAACTACCTGGATGTCTCCAACATTGTGGACATCCAGCAGACA Variant GeneID:529879|CYM:NM_180994:140_cdna 239^475 1 EMBV3_28776 GeneID:529879 3 GENE CYM CPC Chy chymosin EMBV3_40910 AGAGAGACTGGCTGATGCCTAATGGTCCCAGGTGGCTCAGAAGATACTTTGGACATGCAT Gene GeneID:617951|NRSN2:NM_001101269:1336_cdna Constitutive 0 NULL GeneID:617951 13 GENE NRSN2 NULL neurensin 2 EMBV3_34286 GAGCCTTACCAGGGTGACCGAGTAGAAGTTGTATTTTCCATCCAGCCAGACACACAAAGC Gene GeneID:615884|LOC615884:XM_002699569:94_cdna Constitutive 1 NULL GeneID:615884 X GENE LOC615884 NULL similar to Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) EMBV3_41288 CATTCTCTGCAGCCCTTAAACTGGGCTCTGTGCTTCACGAGGGAATGTTTCATGTCCTTG Gene GeneID:521837|MPZL3:NM_001098051:92_cdna UTR3_Alt 2 NULL GeneID:521837 15 GENE MPZL3 MGC139235 myelin protein zero-like 3 EMBV3_00620 TGGATGACCACAGCGTGATTGGCCGCTCACTGTTCAAGAAGGAAACCAACATCCAGCTGT Gene GeneID:532824|EEFSEC:NM_001083464:38_cdna Constitutive 1 NULL GeneID:532824 22 GENE EEFSEC MGC148713 eukaryotic elongation factor, selenocysteine-tRNA-specific EMBV3_16308 CAGAAGTGATATAGGCCAGGAGGTGGCGCTTACCTGCCAGAAGCCAGGAGGCCATAATTA Gene BVV0102_147283 + 0 NULL GK000010.2:65093068-65111920 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00021629 1 XLOC_012302 NonCoding TCONS_00021629 XLOC_012302 NonCoding NonCoding - 10:65104599-65105474 - TSS15519 875 2 TCONS_00021629_3 63 0.973714285714286 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000211292916305245 0 0.000229402462810374 9.83442037949665e-05 2.46564466927701e-05 0 1.6961541156618e-05 0.000576653519129113 0.000287393825706112 0 0 0 0 5.54814037319834e-06 0 XR_233175.1 LOC101902481 PREDICTED: Bos taurus uncharacterized LOC101902481 (LOC101902481), 0.0 830 100.00 0.524571428571429 NM_012262.3 HS2ST1 Homo sapiens heparan sulfate 2-O-sulfotransferase 1 (HS2ST1), 5e-23 113 76.97 0.165714285714286 0 noncoding 0 0 0 0 0.127033128646867 0.269719199682024 0.0351833993072412 0.480704928103554 TTTTTTATTAAAGTGACTGCTCTCAGCCTCTTAATCCAATTTTAGTTTGGGTTTTTTTTGTTTTTTTTTTTTTAATAGGCAAAAGATTAGCAAATACAGCTCCACTGGCTAAATCCAGACAACCACTTGTTCTTGTAAATAAAGTTTTATTGAAAGACAGCTTTACAATTGTTTACATATTGTTTAAGGCTGCTTTTGTGCTACAGCAGCTGAGTTGAGCGGCTGTGACAGAGAGCATGTGACCTGCAAAGCCTAAAATACTATCTGGACCTTTAAAGTCTGCTCATCCCGTTAAGAGATGCTAAGCAGCATCTTTGCCAACCATTTTGCCTCTAGGTGCAAATCTACACGTCACCCCATTAACCTTCTCCATAACCCTCTGCAGATAAAGCCCACTGACTGCCCTCCGACCTTACCTTTTGAAGAGTGAGGTAATTATGGCCTCCTGGCTTCTGGCAGGTAAGCGCCACCTCCTGGCCTATATCACTTCTGCAGATGCTAACAAGCTCAGTTTGTAAGCATTTCTCCTTCCATCATCCCCAGCCTGCACAACTTCTTAGTGATGCTGGTGTCCCTCTCATCAGTGCATTTCAATGGTTTGGGGACTGGTATATCCTCTCGTGGGATGCATTCTCTAGTTGGGTCTTTTGGCTTACATAGAGCCCTTCCAGCATGTCCACTTTCCTCAACCACTTTATTCCTTCCTGGACGGTCTTCTGGAGTGAAGGAGAGAAGGATGGGGGAAGCATCCTAAACTACTGAGCTTCGTCCAAGCCAACGTGGAGTCCCTGAGCCAAAGCTGACATCAGAGATACCCCATGTCTCCCAGGAGTGGACATTGGCTGGAAGCAGCCTGTAGGAAACATGCCCCAGTA TCONS_00017568 . 5' 900 TCONS_00017568 . 5' 900 EMBV3_37253 TGCCAGACAACGTCGGCTCAAAGGAAACGAGAATACCATGGAGCGCCTCTCAACATCGCT Gene GeneID:618267|AP4S1:NM_001040603:56_cdna Constitutive 0 NULL GeneID:618267 21 GENE AP4S1 MGC128561 adaptor-related protein complex 4, sigma 1 subunit EMBV3_31085 ACTCCCTCATCCTGGGTGGTGTTATTGGCGTCTGTACCATCCTGTTGCTGCTGTATGCAT Gene GeneID:511030|GOSR1:NM_001038525:91_cdna Constitutive 0 NULL GeneID:511030 19 GENE GOSR1 MGC133734 golgi SNAP receptor complex member 1 EMBV3_04819 CTGGGAGCCCTTTCTGCTAGTCTTCAGCCAGTTCCATTCAATCCTCATAGGGTTTAGGGT Gene BVV0102_212599 + 0 NULL GK000026.2:21300159-21470762 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150406 TCONS_00150404 1 XLOC_091867 Coding TCONS_00150404 XLOC_091867 Coding Coding HIF1AN 26:21291064-21306410 = TSS112675 7597 1 TCONS_00150404_2 349 0.0596288008424378 8 0.505441511893125 0.000164525892877135 0.000141304323157652 0.000142355867428519 0.000138674622344931 0.00019612232266333 0.00035025053856983 4.59545515815339e-05 0.000550426379327587 7.99492225960832e-05 0.000262604590360109 8.28246166037254e-05 9.12467740439664e-05 4.10348997513849e-06 3.23025638313681e-13 6.72331024257658e-07 0.00126583756576147 0.000423673475499806 0.00192198156618997 0.000178187475921246 0.000558444424436688 0.000274069630131321 0.000425824181952375 0.000563924737014474 0.000809850670819491 0.000386708623718764 0.00029299222804197 0.000268571405139034 0.000322236321720877 0.000163505163623587 0.000324776372440295 NM_001083443.2 HIF1AN Bos taurus hypoxia inducible factor 1, alpha subunit inhibitor (HIF1AN), mRNA. 0.0 2401 99.93 0.175463998946953 NM_017902.2 HIF1AN Homo sapiens hypoxia inducible factor 1, alpha subunit inhibitor (HIF1AN), mRNA. 0.0 2509 88.99 0.256548637620113 TCONS_00150404_2 sp|Q9NWT6|HIF1N_HUMAN HIF1N_HUMAN Hypoxia-inducible factor 1-alpha inhibitor; 0.0 697 97.13 0.997134670487106 2 coding 0 0 0 0 -0.0633114884632344 0.644364272569711 -0.0063437011073026 0.898300750157324 CCGGTGGGGCCGTCCCTAGCGGTAGAGATGGCGGCGACTGCAACGGAGGCCGCGTCCTCGGCCTCTGCAGAACCCCGGGAAGAGGCTGAAGGCCCTGGCCCCGCCTGGGATGAGTCCCAACTGCGCAGTTACACCTTCCCGACCCGGCCCATCCCGCGTCTGAGTCAAAGCGACCCCCGGGCGGAGGAGCTTATCGAGAATGAGGAGCCTGTGGTGCTGACGGACACAAATCTTGTGTATCCTGCACTAAAATGGGACCTCGAATACCTGCAAGAAAATATTGGCAACGGTGACTTCTCCGTGTACAGTGCCAGCACCCACAAGTTCTTGTACTATGATGAGAAGAAGATGGCTAATTTCCAGAACTTTAAGCCAAGGTCCAACAGGGAAGAAATGAAATTTCATGAGTTTGTTGAGAAACTGCAGGATATACAGCAGCGAGGTGGTGAAGAGAGGTTGTATCTACAGCAAACACTCAATGATACTGTGGGCAGGAAGATTGTCATGGACTTCTTGGGTTTTAACTGGAACTGGATTAATAAGCAACAGGGAAAGCGTGGCTGGGGGCAGCTGACCTCTAACCTGCTGCTTATCGGCATGGAAGGAAATGTGACACCTGCTCACTATGATGAGCAACAGAACTTCTTTGCTCAGATAAAAGGCCACAAGCGATGCATTTTGTTCCCTCCGGATCAGTTTGAGTGCCTCTACCCGTATCCTGTTCACCATCCCTGTGACAGACAGAGCCAGGTGGACTTTGACAATCCTGACTACGAGAGGTTTCCCAATTTCCAGAACGTGGTTGGTTACGAAACAGTGGTTGGCCCCGGTGATGTTCTTTACATCCCAATGTACTGGTGGCATCACATAGAGTCATTACTAAATGGGGGGATAACCATCACTGTGAACTTCTGGTATAAGGGGGCCCCAACTCCTAAGAGAATTGAATATCCTCTCAAAGCCCATCAGAAAGTGGCCATAATGAGAAACATTGAGAAGATGCTTGGAGAGGCCTTGGGGAACCCACAAGAGGTGGGGCCCTTGTTGAACACAATGATCAAGGGCCGATACAACTAGCCTGCCAGGAGTCAAGGCCTCCTGCCAGGTGACTGCTAGCCCGTCCACACCGCTTCATTGATGAGGACAGGAGACTCCAAGCGCTAGTATTGCACGCTGCACTTAATGGACTGGACTCTTGCCATGGCCCTGGAGGCAGGTGTTTGGGGCAAGGCAGGGTGGTTGGCACTCCACTCCCATTCGGAGGGACTTCTTACCCTTGCCTCTGTGCCCCAGCACCTTCCCTCTCTGCCCCCTAAAGTCCTGCATTCAGTGTGTGGAGTCCCCAGCTGCTGGTTGTCATCATGTCTGTGTGTTGGTCTGTCAACCTCGGGGTGTGTGTGCGTGTGTGTGCCTGCACACGCGTGTATGTGTTTCTTCCTCACTCCCTCCTTCTGGGTCAGGATGCCACTTCTGGCTCTCAGCTCTGTCTCCTGCAACCTCAGTGCCTCAGCCTGAGAGAGAGGAGATGCTCTCGGATGCCCCCACATCTGGGCTCCAGGGCCACAGCTGTCCTGTCCGTGAGGTCAGTCTGCCCCCTCCCAGTTTTTACAGAGTGAGGCTCTAGGCTGGTAGGAACACTACGGGACTCTAATGGGAGAGAGAGGGAGGGGGAGGCTTCCCTCTGAGAGCCTCAGTAGCTTCCTCGGAGAGCGAATTAGGCAGGGTTCCAACTTGGACCTTCAAGCTCAAGCCATACACAGAAAAGCACCTTGGGACAAAGGAACCAAGGATTGTGCGAAACGTCCAAATTACAGGAGTTTTTACATACAGCTGCTTTCTTTCAGCACCAGCTCTTGCTCTCTGTCCTGGGTGCCAGGGGAGTCCTCCAGCAGTGGCTTCTGTAGGTTCTAAGGGTGCAGGCCTCTTGGGGATATGTGTGTGTGCATGTGTCTACACTGGCCTGCCTCTCTGCTGACCAAGTTTCTACTGCTTAACCTTGTCCAGTGGAGCATGCAGCGGGAACTCCAAGGCAATACTGCCTGAGCTGGTCTAAAGCTTTTAAACTCATTTTTAGCCATTGGATGTTTGTCAGGCCTCACTGCAACAACCTGCCTGAGACCGACTGGCTAGAGCCTTCAGATCCTACGACCCTCCCTGCCCAGGCCAAGTCCTCGGCTACGTCTATGGAGCTTCCTGGCACAAGTAGACTAAGTGGGGTCAAGCTGAGGCAGCTAACTCACCACCTGTCATCCACCTCATGGCAAGGGCAGAAATGTAGCCTTGCCTCTTGAAGCCAGCACCTCTGCCAGACCCCACTGTAATGTTCCACAAACACCTTCAGAAGTCAGGGCAACTGGTGGAGCATGGAGTGGAATTTCTTTTCTGTTCATAGTTACTTGTGGGAACCACTCTCAGGGCTGCAGCTCACAGCTGGGTCACTGGGCACTGCACAACTCAAAGGGCTCGTGTGGTGAAAGTGGGGCCCTTGGAATCGGCAGTGTGGGAGCCCTGCGTCCTGTCGCCTCCACTCCCATCTCCACGCGCCTTCTCTCTGGAAGGAAAAAGGACTTGGAAGTCTCTGGGTTCATTTTTTTCCTTTTTTTTTTTTTTGCCAAAGGTTTACTTCCAGTGTCTGAGCTGTGGCTCTCACCCCCAGAGCTCAATTTATAGTTAACAGCGCACTGATGGACTGAGAGGATGCGCGTGTGTGTGCATGAGCGCACCTGTGTGTATTCTGGGGTGGGGTGTTTATTTTTAGTACCCCATGCTGGGGTTCTCTGATGCAGTGTGGGTGTTCAAACACGGTACCTTCTAAAGTGTAGTTCTTTTAAATATAGCCAATGCTGGAAAATGTGACCGCAGTGGTCTCCATCCCTCCATCTCTTTTGGGAAAAAGGAACGCAGCAAAGAAAACAGGACAGAGGAAGGATAAATTGATCACATTCACATTTTGAAATACAGCACATTCTTTTCATTCTCCTCAGCATGTCTGCAGCCTTCCTGGCTCATTCCTCAAAGATGTGGGTGATGGCTTGGTCCTCTCAGCTGATCGTCTCTGGGTGCTGTGCCCACCCATGTCTGACCAAGGTGGAGGGGCCTTCACAGGTTGGGTTCTGATTCTTGGGTAATACAACAGGGACCCCTGACTATTAAGACACCTAATGTCAAGTGCTTTTGTCTTTGTTCCTCACTGTCCTGCAAGGTAGGTATTTTCATTTTACAGCTCAAGAGTAAGTGATTGGTGGCAATCAGGATTCCAACCTAGTACTATTTGGCTACAAAGCCCCTGCTGTGCTTCTCTAGAAAACTGTTGATTCTCCTACTGTACTTCCTCTAAACTACAGGCCTTGCTCAGATCTCACCCACTGGGCAGTATCTAGTACAGACAGGCTTAGCCCAAAAGAATACAGCTCAGGGTAAAAGCTATTCTGGGCTCCAGCAAACACTTCTTGGGGAAAATGCCAGGAAGCCATACTATGGAGTTAAAAGAGTTCTGAAATGAGTTACAGGGAAACAGTTCTGGATCCCATTGATTACGTGTATGTCCTTGAATAGGTCCGGTCACTTCTCCCAGCGTGCTTGTGCACGTGGAGCATTGAAGATCTAGGTCTGGAAGTTCACTGAGAACTGTAATTCATGTTCTGCTGCCTGCATTTTCCCTGATGAAAAGATTGAGGCCCTTCTTTTCACATAGCTAGGCTAGGGCTGTTCAGGCAAAAATTCTGCTTGTTGCAGAGGAAGCGTCTCTGCCCTATTGCTTAACACCTATCCTAACTAGCAGCATGAGGGCAGACATAAGAAGGAAAGGTGGGCGTTTGGGCCTGTATAGAGGTCAGCCATGTTGCATGCTCCTATTTTTAAACCAGCAGGTACAGAGGAAACTACTCTCTCGTGAAGTCTAATATTTGTTGGGGGGTTGGAGTTGGGGGATGGAGGAGGGGCTGTTCTGGGCATCAGTTGAGCAGATGCCCAGGATGCCTGGGGGAGACCAGCTTCTCCTACAAATCAGAGCTCTAAATTACAAGGTTTTTACCAACACGAACAGTTGGGGGAAGTCGTCTGCTCTCATTTGCGTAATGGTTTCTGTCACTGGTGATTAGACACAGGATGAAGGAAAAGAAATTTGACAATTAGGAATGAGCAATCATTAATCTGAATCTGTTAGGAGACAGAGAGGGGAAGGATCCTTATCAATGGCCAACCCAATGTGACGAGACCCTCCCTCTGTCCCCCAGAGACTCTTGGGCCACATACCCTTTCATTGTTTCCTCCACAGGCTGAGCTGTTATCTCTTAACAAGGCTGGGTGGGCCCCTTCCCCAGGCTGAGGTAGATACAGGAACAGACATCTAGAGCTGACAAGGAGTGTCAAAGAGTGTCAAACGCAAGCGATAGGGCAAAGAATAGCAATAGAATGGTTTTGACATGTGTTTCTTGTTTGTGGAAAATGTTTTTGTAATCAACACTACAGATACCCCACCTATGACAAGAATTTGTTAGATTCCAACACCGAAGGATGTGGAGAAAACCTGCTCTTTTATCCTCCCGGAGCCTCTCTAGTTGGAGAGGAAAGCACACGAAATACCCAGAGGTTATGAAGCCATGTGTCATGCACCCTGTGAGGACAAGATTAGAGGCTGTTGAGAGAGGAAGAAGATGAGTGGAGAGCAAAGCTCAACCTCCGGGCTCCTCCTGGTGCTTGGGCTCATCAGGGAGCACGCTTCACCCTGGGCCTTCCCCCTCACATATCATTGCGGCTGTAGTTACGTGGAAGGCCCTGATGTGTGAGCAGGTGACGAGATGAACTAACAGGCTGAGTATTAAAGTGTGAAGAGCCCCTACTTGGATCTTATGTCTCCATGTCACCTTGTCTCATCCTTCTGATTCTTCGAAGATCATGGACAGTATTTGCATCAGTTGTTATTTCTCAGTTTTGTGACTTACATGTTGGTGGTTCCTTAGGTCAGAGGCTTCCTCAGGGATTGGAGGCAGGGATGGCAGAGTTGGTGGTTCGTTGTCTCCTTAGAGTGGGAGCTTCCTGTGGATAGGACTGTCTCTCCCCTTGGTAACTTCCCTACCTCTGGGTCTTCTACCGTTCAAAATCCAATGCAGAGGTCAGTAGGACTGCAAAGAGGGGTCCTCAGTGGTAAGTTTTACCCAAACAAGTTGGATATAGGGATACACCTAAGAAATGCTTGTAGACTTCCAGACGCCCTGGCCTTTCTGCCCGTGTCATCTTCCCTTTTTCTGGTACCTCTGGTGCTTCCATCCAGCCCCAGCCCGCTTCTCTGGTATCCTCTCAAATTGCCTGCTCTAAAGAGATATTCCAGCTTCCTTTTCCAGAGTACCCCTTCCCCCAGTTTCTCCTACTTGTCCTCTCCCTGCCTAGTCTCTGCAGCAGCCCCGTCACCAAGGTCCTTTTTGTAAACAGTCACTTTCGCAGAAGGTCCCTGGCTGAGGTGTTTGGATTGACTTTCTCTAGGGTCCCTTCATCTTCCGTTTCTGGTCTGCAGTAGTTTTGTGTACCTGTTGTGTACCTGCTCTGTTCTCTTGCCATCCAGTCCTTAGTCATGTCTGCACATCCTGGTTTGGCTTTGCTCACTCTGGGAGCCCTTTCTGCTAGTCTTCAGCCAGTTCCATTCAATCCTCATAGGGTTTAGGGTCCTCTTCAGAGCCCTGCCGAGCACTTCTGGTGTTATTCTGGGGGACAAAGCCTCACACGTGGGCAGCCTTGAGTCCCAAGGGCCTGTGGTTAGTGAGACCTCCAGTGAGGAGTGAGAGGAGGGAATCCAGAGTCATGGACAGTGGAGGACCAGTGAGAGAGATTGAGCAGGAGACTCCCCAGGAGTAGAGTCAGCTGAGCCTGGCAAGCCTGGAGGGAGGAACTGAAGTTTGTGCTTCTGTCTACATGCATTGGTGTGCCTCGGGGTCCGGCAGTTGAGGTTTGGTGGGTGTTCTGCGAATGTCCCCCGATTTCTCTCAGGTATCTTTGGTGATGCTCTGAGTCGCCAGATTGGCTCACTTCTGCGTTTCAGTGTTTGCTGAAAGGGAGAAGCACACTGAGTAGTCATGTGTTAGGAATGGAGGGTCTTAAACAAGAAAGACCCTGGAAGCCAGGGTAGCAGGAGACAGGGTTCCAGTGGTCAGCTTATATAACCAGACTGTCACTTCACTCCTCCAGGTGTTTAGTACAATAGCTGGTTAGAGGAGTTTAAAAAAAAAATTGGGCCTTGCCTTCCCCATCTAAATCTGGTCTTCAGGTGATGTTTTAGGAAGGAGCATGTATCCTTTAACTTCCAGTGAGAAACAGCGTAACAATCTAGTGTAGCGTATAAAAGCATGGATTTGGGAATCAGATGTATTTGGTTCAGATCTCTAGTTCTGCTACCTTCCGGCTGGGCTGGATCTTATTGATTGAGTAGACCTTTGTGAGCCTCAAGTTTCCTCAACTATAATGATACCTGTGTAGGGAGAGGGAGTGGGTGTTGAAAATATCTACCTCAGGGCTGATGAATCGATGGAAACAATGTTTGTAAAGCTTTAGCACAGGGCCTGGCAAGCACTTAATAAATGGCTGTGGTAGTTGTGGTTGTACTTATTCAGAAACTCAAGTTTAGTGATACCTTCACTCAAGAAAAGTGTAAGGAAGAATAAATTGTGCTGGAGAAGTTCATATTGAGATTGGACAGACAGATGAGCCTTGGTAATCTTAAACCCACCTTGGAGGGAAACAGTAGAATCTGATGCCTTCTGCTTGGTCAGCCAGATTTTTCCTCTCTACACCAGCCCAGGGCCGGCGTGAGAAGCTGTTAGGTGCAGGCTCCCCTTAGACTCTGAGGGCTGAAGGCAGCTGGATGAGTGTCCATTATACCCGAAGAAGCTATTGCCAACCTTATACCATGAAACATGGCAGCAGCTAAGTCAGGCCCCCTCGGTGCAATGTTATTTCATGTATTTAACTTGATTATTCCAGGACAGAAGGGCATTCAGAAGAGAATTCAGAAAAAAAGACTAGGATCTTTACTAGCTACCATTTGTGGAGCCTCTGGAGCATTTCTGTTCCATACCCAGGGCCCATCTCTACCCACTTGTGCTCAGTTCATCGCAGCCATCAAGCAGGCAGTTGGTGTCACAGGTCTGCAGAGGAGAAGCACCTGACAGGCTCAGGTGTTCACAGGCTTCCTGCAAGAAGTCACACAGTCTAAGCTGATTCATGGAAGACAACCAGGGTTTGGGAGAAGTGAAAGGCTTAAGTTTCTCCTCTGGCTTCTCACTCTCCCAGTTCCCAAAGCAAACACTCTCTTCTTCCATGTTTAAGTGTTTTAGGAATCACTTCTAGGAAGGAGCTAGACAGTGGACCCCCAAAAGAAGAAAACCCTTTGGTTGGCCAGAGAAACCTTTGAAAATCGTTTTGGTTGTCAGCCCAGGTTTGTCCTGGAGTGCAAATGGATTTGACTTGCTCAGTTGTAACCCCATCACTGCCTTCTCAGAAAGACTGCATTCTGGCCTTTGGAGTTACACTCTGCCTCTCTGCCCAGAAGAGATGCTGGATCCAGTACTTGAGCATCAGCCCGAGATGTACTCTGATTGCCTGGAAT EMBV3_01536 GACTCATTGCCAGAGAATGTGAAGGCTTATAGTCACATGAGAAGAAGGAAATGGCAACCC Gene GeneID:616008|IL13RA2:NM_001102296:135_cdna Constitutive 0 NULL GeneID:616008 X GENE IL13RA2 MGC179381 interleukin 13 receptor, alpha 2 EMBV3_23049 AAGACAGAAGAGGTAGGGAGATTCTTGGCGGGACATGTAGCCCTGTAGTCTTGGTCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42909 GCCATAGGAAAGAGGGGTGAAGGCAATTCCCAGTTTAGACTCAGTTACAGTACATGTTTC Gene GeneID:539871|RNF12:XM_002699992:91_cdna Constitutive 0 NULL GeneID:539871 X GENE RNF12 NULL ring finger protein 12 EMBV3_42332 ACAGCTTAAAAAGAACAATCTTCGTGATTGGCTTCGTGTGGTTGCATCTGACAAGGAGAC Gene GeneID:100335322|LOC100335322:XM_002690209:83_cdna Constitutive 0 NULL GeneID:100335322 9 GENE LOC100335322 NULL hCG15121-like EMBV3_05005 GGACACTGCTCCAGACCTTTAGGGGAATCCAGACCTTCTTTTGTTACTGAGTGCGATAAC Gene GeneID:539784|PSMD2:XM_002684875:78_cdna Constitutive 2 NULL GeneID:539784 1 GENE PSMD2 NULL proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 EMBV3_27285 TCCTACATTTGCAGGCCGGTCCTTTCCCACCTAAGGCCACCTGGGAAGCTCAGTGTTAAT Gene BVV0102_047214 + 0 NULL GK000015.2:78794201-79012764 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25587 CCTACATTGTTACCATTCTTGGCCAGGGGTGCTGTTGACTTCCACTTCAGGCTAACTTCC Gene BVT0101_050002 - 1 EMBV3_42021 GK000017.2:64891608-64899651 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075913 TCONS_00075917 TCONS_00075921 TCONS_00075918 TCONS_00075919 TCONS_00075922 TCONS_00075916 TCONS_00075920 1 XLOC_046679 Coding TCONS_00075919 XLOC_046679 Coding Coding SIRT4 17:64882719-64893638 j TSS57105 2949 4 TCONS_00075919_8 62 0.114276025771448 4 0.730261952738597 4.5794276450054e-10 2.11808918901422e-05 0.00044353520242875 1.63836158372827e-05 6.17276420494548e-10 9.13808816206255e-06 9.89719842354059e-10 2.15012244657596e-09 2.25342534098264e-07 3.74113842985361e-12 1.37943690683766e-33 6.97796637005385e-12 6.06638792245063e-12 2.78509817393936e-12 4.1302202748657e-06 0.000216801741002834 3.54910621595644e-08 0.0027314405960559 7.31574833432142e-09 1.69285170351666e-09 1.25271141363917e-07 1.49711530723587e-05 3.47531103433261e-10 0.00012296445063785 1.39865661638682e-05 2.91410993877695e-08 5.73857716598049e-09 1.43219410673079e-05 6.56040102899743e-13 2.31366922060459e-12 XM_005217844.1 SIRT4 PREDICTED: Bos taurus sirtuin 4 (SIRT4), transcript variant X1, 0.0 1600 100.00 0.300440827399118 XM_005253864.1 SIRT4 PREDICTED: Homo sapiens sirtuin 4 (SIRT4), transcript variant X1, 3e-178 630 87.04 0.174974567650051 0 coding 1 1 1 1 -0.0242818712173581 0.872878205032643 -0.00123059204823411 0.981470342799049 TCCCTGTTGGGCGTAAAGTGTCCCTTAAGCTGTGGAAGGGTCCTCTGCTTGGATTGTGGGGAGCAGACTCCCCGTGGGGTGCTGCAGGAGCGGTTCCAAGTCCTGAACCCAACCTGGAGTGCTGAGGCCCACGGCCTGGCTCCCGACGGCGATGTCTTTCTCACCGAGGAGGAGGTACAGAGCTTCCAGGTCCCATCCTGCTCTCGATGTGGGGGCCCCCTGAAACCAGACGTCGTCTTCTTCGGGGACACGGTGAAGCCTGACAAGGTTGATTTTGTGCACAAGAGGGTGAAAGAAGCTGACTCCCTCCTGGTGGTGGGATCATCCTTGCAGGTGTACTCAGGTTACAGGTTCATCCTCACTGCCCGAGAGAAGAAGCTGCCCATCGTGATACTGAACATTGGGCCCACGCGGTCCGATGACCTGGCATCTCTGAAACTGGATTCTCGTTGTGGAGAGTTGCTGCCATTAATAGACCCACGCTGACCACAGCCTGATGTTCTGGAGCCGGAAACTGGGGCTTTCACTTTAATTCTGCTGCTAAGGATACCTAAGGATTCATCCCCGCTTCCTCTATCTGACCGAGGCTTACCAACTGTAGCCTGCAGAGGGCGGCAAAGCAACATCTCTCTGCAGGACCATCTCTGAACCCAGCAGGTTTCAGAGCTCAGGAGTTAAAATCTTCAGGCTAATGAGATTTACCCCATAAGATGGACTTGCAGTTTCTTTTGATAGGAAAACTGCTTTTTAAAAATCTCATTAGGCAGAAGAAAGAGCCCAGGAAATATGTAAACCAGAATGACCTCCAGAGTGCTAACCTAGGGATCTCACTAATATCCTAAGTAAGGGGGTCGGGGGAAGGAAATGACTTAATTTCTAATTCTAAATGGTTAAATATATTTAAGTGAATCATTTTGATATACTTTTTTTTTTTTTTTCAAAAAAATGATGAGCAATAATATGAATTAATTTTTTACTAACCAAGGGATAAAGGAAACATTTTTTAAATAGCACATTAGGTATGTGGGTTGTACTTTTATTTTTTTTAATCAGCTGAAAATGAATGTAGCTTTATGACCCAGTTCTCTAAGGATTTCTGCTTGATTTCAGCTGCTGGAATGAGACGGGCCTTGAACCTGGTCTGTAGAGAGGAAACAGTGAATTCCCAAGTGGGTTCTTAAATTGATTTGTTTCTGCTGAGGGAAGCAGCAAGCCTTGTTTGATTACTGTGTTAGCCAGAGAGAATCATCGTCCTACGCTAAAGCTTTCTGCACAATCTCATCAAAAAGTGAGGCAGGTGAAAGATTCACAGCCTATTCTGGATAGTCTTTTGTCTGAAATTGGGGCAAGCAATATACATTTATCCTGCATCTGCCTAGGAAGCAAATTTCAGTTAACTGGGATAACCCAAGATATTGAAAACACATAGCTTTCTTTTCACCTGCACAATATGTTTGCTCATAACCATCCATTAATGCTGGAGAGGCGTAAGGTTGTTGTAAATCTCACTCCAGCTTTTTTGCATCTAGAGATACTAAGATGCTCTGAACGAGATTTGCTCAGTTACTGAAAGTCGGTACTACCAATAATTGCATTCAAATCTGGGTCTTTTGAATTCCAAGCCATTCCCCGCCATGAATCTCATAAATGGTTACTGACCAACAGTGTATTTATCTACTAAGGCTACAAAGATACAGCTCCTTGTTCTCAAGTGGCTCACAAAAGATGTGTTATCTCGCCCACCCTCATTCCTTACCAAAAGATGTCACAGAGTCAGGCATGAAATGATAGGAGAGAAAATTTAGTCCATCCCCGATTCACTTTGTCTAAGATCCAGACTTAACTAAGGCCACAGTTTTTAAAGAGCCAGGACTAGAATCCAGGTAGATCTTCCTCCCTGTTCTTTTAGACAGCAGTGATTCCTACCTCTCTGAAGATTCCAGTTAGTAGGAAGTTAGCCTGAAGTGGAAGTCAACAGCACCCCTGGCCAAGAATGGTAACAATGTGGGCAGTGGAGACCAGGTTAGGCTGCCAGGGAGAGAGGTCAGGCTCTTTTATCACCTAATGCTGGCATGATTCATGAAACCAAGTCTTGAGGGCCTTAGGAATGTTTGTTTTGGTTGTATTTCCTCTGGAAATGAATTCTTTGCAAAAAAAATTTGCCTCAAGAGGAACCTGGCATTTCCTGAAGCTGATGCTTCTCATGTCTCTTACTTTGCATCTTTTGCTTTCTTCTAGCTTTGCAGTTCCCAACCCGCTCTAAGTGCCCTGAGTTGGACTAACAGACTTCTACTAGCGGGTGCTGTCAGCTTGTCGCTGCCCTGGTTACATGGTTCTAACTGCATTCATCCAGCTTTGGCTGTGACTTTCACTCATATCCTTCCTAGTTGCTTCCACAACTCTGCTATCACAGTTGTATTATATTGTTTGCTTTTTAATTAATTTATTTACTGTGGCTGTGCTGGGTCTTCATTGCTACACACAGGCATTCTCTAGTTGCAGTGAGTGGAGGCTACTCTTCTCTGTGGTGTTCAGGTTTCTCATTGCTGTGGCTCTTCTTGCTGCAGGGCACAAGCTTTTCAGCTCAGACTCAGTACCTGGGCCCCATGGGCTTTAGTTGCCCCAAGGCATGTGAGGTCATTCCCAGACTATGGATTGGACTTGTGTCCCCGGCATTGCAAGGCAGATTCTTATCCACTGTATCATCAGGGAAGTCCTCACGGTTTTCATAAGTAGAAGTCATGAAGGCAAACAAGCACAGAATACTCAAATCTCCTTCCCACTAACTCATACTCCTTTCACGATGTTAAAACTGAGTATCCTCTCGGCTCTCCCTTAAATAATAGCATTTGTTGAACACGCTATATCCCAAGCATTGTGCAAAGTATTTTACAACGTATCAGCTCGGTTGACCCCACCAGAGATGCTTGTGCATGCATCAAGGTCAAT EMBV3_20550 AAAGGCTTACTCTGAGCGTCGGATCATGGGGCTGTTTGCACTGATGGCAAGCTCTTCAAC Variant GeneID:538821|COQ10A:NM_001076130:16_cdna 445^637 1 EMBV3_03555 GeneID:538821 5 GENE COQ10A MGC140271 coenzyme Q10 homolog A (S. cerevisiae) EMBV3_14355 GCCTCAATATGTGCCGCCAGTGTTTCCGCCAGTATGCGAAGGACATCGGCTTCATTAAGT Gene GeneID:784384|LOC784384:XM_002690747:480_cdna Constitutive 0 NULL GeneID:784384 10 GENE LOC784384 NULL similar to mCG7602 EMBV3_24328 GACACCAATGAGATACAAGATTACTTGCAACAGCTCACAGGAGCCAGAACGGTACCTCGG Gene GeneID:786206|GLRX:XM_002695243:203_cdna Constitutive 0 NULL GeneID:786206 18 GENE GLRX NULL glutaredoxin (thioltransferase) EMBV3_37922 ATCGAGGCTGATGACAACCCCTTCTTTGACCTCAGTGTCTACTTTCTGCCCGTTGCTCGA Gene GeneID:616048|DUSP13:NM_001163944:405_cdna Constitutive 1 NULL GeneID:616048 28 GENE DUSP13 NULL dual specificity phosphatase 13 EMBV3_35464 ACTGGCCGACCTAGTGTAAACGGCCTAGCATTAGCTGAGTATGTTATCTACAGAGGCGAG Gene GeneID:533901|TNKS2:XM_002698379:11_cdna Constitutive 0 NULL GeneID:533901 26 GENE TNKS2 NULL tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 EMBV3_33331 CAACTACGAGTACCGCCTGATCCTGCGCTGCCTCCCTGCTGCTCTGTCCTGCACAGCGAA Gene GeneID:533737|PICK1:NM_001035401:76_cdna Constitutive 0 NULL GeneID:533737 5 GENE PICK1 MGC133796 protein interacting with PRKCA 1 EMBV3_42036 GCGGAGCACTAAAAACTCATTTCTACAACATCGCTCCAGAAGCTCCAACATTATCGCACT Gene GeneID:768233|ELMOD1:NM_001078108:26_cdna UTR3_Alt 2 NULL GeneID:768233 15 GENE ELMOD1 MGC143134 ELMO/CED-12 domain containing 1 EMBV3_04005 GAGAACACCACTGATTTTACTGTGTTCTTCCTAAAAAGAAGGAAGGCTCTTACGTAGAGA Gene GeneID:768207|SS18L1:NM_001078095:1378_cdna Constitutive 2 NULL GeneID:768207 13 GENE SS18L1 KIAA0693 MGC139314 synovial sarcoma translocation gene on chromosome 18-like 1 EMBV3_18335 TGAGGCTCAGTGGTAAAGAACCCACTTGACAATGCAGAAGATGTGGATTCTATCCCTGGG Gene BVV0101_058617 + 0 NULL GK000005.2:92443953-93623042 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04716 TCACAGATCCATTTGAGCTTGCAGGGAGGTCTGACAGTGCGGAGTCCAGAAGTTTCCCTG Gene GeneID:505482|AS3MT:NM_001035023:72_cdna Constitutive 0 NULL GeneID:505482 26 GENE AS3MT NULL arsenic (+3 oxidation state) methyltransferase EMBV3_33619 CGAGGTTATCCTGAGGTGACGTTAATGGACTGCATGAGGCTCTTCACCAAAGAGGACGTG Gene GeneID:522980|USP2:NM_001046263:134_cdna Constitutive 0 NULL GeneID:522980 15 GENE USP2 MGC137635 ubiquitin specific peptidase 2 EMBV3_16519 AGGCCTCATTGACTCTGTTTTGGCTGAGGACCGGAGGATGGTGTCAAGATGGTCTTAGAG Gene GeneID:522392|MXRA8:NM_001075830:148_cdna Constitutive 0 NULL GeneID:522392 16 GENE MXRA8 MGC140440 matrix-remodelling associated 8 EMBV3_40072 AGTTTGCTTTTAATACAAAGTACCTTTTGCTCTTTATCCATTCTCTGTGGATTCTATTCC Gene BVV0102_377223 + 0 NULL GK000013.2:55057944-55085431 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38428 CTGTGCGTTTCCATGGCGGCTGACACCGTTGTCACGTGGTTTGTTAGTGTTTGCCAAGAA Gene GeneID:100337332|LOC100337332:XM_002696301:51_cdna Constitutive 2 NULL GeneID:100337332 20 GENE LOC100337332 NULL splicing factor, arginine/serine-rich 12-like EMBV3_27581 GCCTGCTCAGTGGCATCAAATGTCGTATTGCCACCTTGAAAAAGCAACTGCAGAGTGAGC Gene GeneID:521737|LOC521737:XM_002689852:47_cdna Constitutive 0 NULL GeneID:521737 8 GENE LOC521737 NULL similar to ring finger protein 30 EMBV3_26560 CTTGTTACCAGAGGAACTCCCCAGGCATCTCGGAACAGGACTTATTTAGTTCCATTGTGA Gene BVV0102_207706 + 0 NULL GK000014.2:3741098-3749436 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054367 1 XLOC_032176 NonCoding TCONS_00054367 XLOC_032176 NonCoding NonCoding - 14:3743368-3743880 - TSS40044 512 1 0 0 0 0 0 0 0 0 0 0 0 0 6.98374391225282e-06 0 0 0 0.00051585123862672 0 0 0 0 0 0.00140587021068711 0.000501705738666413 3.27434741709691e-05 0 0 0 9.38005611142407e-05 0 0 XM_005194496.1 SLC45A4 PREDICTED: Bos taurus solute carrier family 45, member 4 (SLC45A4), 0.0 922 100.00 0.99609375 XM_005251001.1 SLC45A4 PREDICTED: Homo sapiens solute carrier family 45, member 4 (SLC45A4), transcript variant X1, mRNA. 1e-58 230 79.58 0.5390625 0 noncoding 0 0 0 0 0.0123108171378444 0.922910846358056 -0.0198619686289576 0.763626773991513 GGCTCCGTGTGCTGTGGACCAGGACTGTGTCTCCGTAGTGGAATGACCTGATTATTGGAAATGCCTCTTGTTACCAGAGGAACTCCCCAGGCATCTCGGAACAGGACTTATTTAGTTCCATTGTGAACTGGCCACAGGACAACGTTTTTTTATCAACTTATTAAGTTGGAGCACTATAATAGCTCTTGCTGATTTTAGCAGTGATATAAGTGTGTGTTAAACACATAACGTTTTATGAGGAAAAGGGATTATAAAGAGTAATATCGCACATTACTGAATTTTATATCAGGTGGGCACAAGTGGCCTGGTGTTTGTGTGTCTCAGCGCCGAGCCCCCGGTCTCGCGGCTGCTCCCGGGGGCTGTGGCTGCATGGCACTGTCTGCCCCCCTCCCCCCCACGCACAAGGTCCTATCTGTAACGTGCTGACCTCCCGGTGTAGACCGGGCTCCCCCTGCGTCTGTTTCGCTCTGTTACTCTGTGGTTGAAGCTTAATAAACCTTTCCCTGCCAGAT TCONS_00051155 TCONS_00051146 TCONS_00051148 TCONS_00051151 TCONS_00051152 TCONS_00051154 . 3' 2206 TCONS_00051155 TCONS_00051146 TCONS_00051148 TCONS_00051151 TCONS_00051152 TCONS_00051154 . 3' 2717 EMBV3_34329 GTTTCTTTAGACTCGATCTAACAACCCCACATAAATCAGCAAGGAAAGGGCAACAACCAC Gene GeneID:613313|GBP4:NM_001102261:189_cdna Constitutive 0 NULL GeneID:613313 3 GENE GBP4 MGC157238 guanylate binding protein 4 EMBV3_02681 CTTCCACTTTCCCATGCACCCCAAGTCTTGGCTCCACCCGGATGGCTTTCCGATCCTGGG Gene GeneID:618217|LOC618217:XM_002698154:599_cdna Constitutive 0 NULL GeneID:618217 25 GENE LOC618217 NULL similar to zinc finger protein 316 EMBV3_27680 GTGTCCTGTGTGAGATCAAAGAGAAAACAGGCATGTAATGAATTCACTACACACGTGATG Variant GeneID:539222|PBX3:NM_001046453:38_cdna 75^316 1 EMBV3_19792 GeneID:539222 11 GENE PBX3 MGC134053 pre-B-cell leukemia homeobox 3 EMBV3_10622 ATATTCCGTACATAGAAACCAGTGCCAAGGACCCACCTCTCAACGTCGACAAAGCCTTCC Gene GeneID:540803|MRAS:NM_001098118:69_cdna UTR3_Alt 2 NULL GeneID:540803 1 GENE MRAS NULL muscle RAS oncogene homolog EMBV3_26836 GAAACTTACGGAAGGTGGTGCCACAAGGTGAATACTGGGTTGCCCACAGAAATCCGTTCT Gene GeneID:783725|CD72:XM_002689678:93_cdna Constitutive 0 NULL GeneID:783725 8 GENE CD72 NULL CD72 molecule EMBV3_25992 CTTAACACTACTGAACTATACAATGAAAAAGGTTAAGATGGTGAATTTCATTTTAATGTG Gene GeneID:514494|CA5B:NM_001080908:26_cdna Constitutive 2 NULL GeneID:514494 X GENE CA5B NULL carbonic anhydrase VB, mitochondrial EMBV3_25006 ATGTACACTCCGGAAGAGGATCTGCAAGTTCAGTTATGTGAAGGGAGGACCTTTGGGGAC Gene GeneID:787067|METTL9:NM_001080367:28_cdna Constitutive 0 NULL GeneID:787067 25 GENE METTL9 MGC142473 methyltransferase like 9 EMBV3_31322 TCATTTCTTGTTTCCTCGAAAGCCCCATGAACAGGTGAGTGGCAGTGGGTGAGATTGAGG Gene BVV0101_040364 + 1 EMBV3_25224 GK000009.2:47224632-47461005 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24654 AGACCATCCCTATAAGAAGCCCTACATGGAGACATCACCTAGCGAGGAGGACCCCTTCTA Gene GeneID:532970|TBX5:XM_002694513:418_cdna Constitutive 0 NULL GeneID:532970 17 GENE TBX5 NULL T-box 5 EMBV3_05984 CATCATGCCCCACCAAAGATTGGAAGCTACATGGGGGAAAATGCTACTGGGTTGCTGAAC Gene GeneID:618591|LOC618591:NM_001101276:73_cdna Constitutive 0 NULL GeneID:618591 5 GENE LOC618591 NULL similar to NKp80 NK receptor EMBV3_36112 TGAAGAGCAATCTGGTCTCAGGGAAGCTGGCGATGGCTTGAGTAACCTGCCCAGCCCTTT Gene GeneID:532150|MCTP2:NM_001075957:41_cdna Constitutive 0 NULL GeneID:532150 21 GENE MCTP2 MGC139502 multiple C2 domains, transmembrane 2 EMBV3_15650 CTTCCAGTTATAAGCCAAATAAGACATGGGGATGCAACAGACAGCATAAGGAATATAGTC Gene BVV0102_135296 + 0 NULL GK000002.2:73834530-74044203 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33929 CCTTTACCACTTCCGCCTCCAACGTCCTCTGCTAAGAGAACAAAGTGAATTCGATGACGC Gene BVT0102_025481 + 0 NULL GK000018.2:60344821-60352180 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084588 TCONS_00084587 1 XLOC_051613 NonCoding TCONS_00084588 XLOC_051613 NonCoding NonCoding - 18:60349006-60354512 - TSS63337 5338 3 TCONS_00084588_9 107 0.0623829149494193 2 0.0306993642143506 0.000192287383013087 3.09696609677952e-05 0.00044694858062316 7.97336353078007e-05 0.000468095625098151 2.51605411472543e-05 1.33506521551512e-05 2.14219435703132e-210 8.30764173241153e-32 2.15211339616558e-05 6.01676192485158e-06 2.37803264164984e-06 1.06619508701735e-267 6.52420891638951e-127 2.31644229407249e-05 1.73927022678797e-224 4.73175447839286e-108 1.34512279953705e-50 0.000299730291982786 0.00156885808443083 1.23266536900694e-14 1.69610376722629e-224 4.61797352281768e-67 8.51169766684233e-128 8.26270154002701e-05 0.000533819521263773 0.000497640494570224 6.28148373302824e-06 3.58090512473026e-311 1.64436350876556e-164 XM_005219628.1 MGC137725 PREDICTED: Bos taurus uncharacterized protein MGC137725 (MGC137725), transcript variant X2, mRNA. 0.0 2401 89.89 0.33402023229674 NM_032584.2 ZNF347 Homo sapiens zinc finger protein 347 (ZNF347), transcript variant 0.0 733 69.20 0.335518920944174 0 noncoding 0 0 0 0 -0.0293680376961123 0.845802248981393 0.0144901566881532 0.781321627125753 ATTAAGTCCTGAGACCAGGTGTGCAGTATTAATTAAGACCCTGGATTCCAGTCCGAATTGGAGGAGTGTGGTTTCGCTTCTTTCTCCCTAACACTCCCTCCTCACTCTCTGGCACCCCAGGGTGATACGTCTTTCCTGCTCTTCCTCAGCGCTTCTTGCCACTAGTCCTCTTTCTCTCCCAGCACCAGAAGACTCTGAAGGCCACGGTTCCAACTCTTATCTTCTCTCCTGACTCCCTGTGTGAAGTTCCTCGTCACTGCTGCTCTCTAACCTCTGGAGATCGGGCTCTTTATTTCTGTTTGATATACCTGCTACATTCAATCAGGACTTAACTGCTTTCACTTTATCTTCTCTTTCTTTACAAGTCCCTGAGCCATCTTCTATGTTCTCATCGGTTCTCCCTCATGTTGTTCTCTTTCTCAGTCGCTCTGTATCTGCTTCTCTTGATTCCCTTTGCCCCCAAATTTTCAGGGGTGGCGACTGAATAAGATACCCTGGGACCCAAAGAGACCGTTTTCCAACTGAGTTGAATTTGACACGGAACACTGATGTCACACGGGCAGGTCATGGTAGCACCCTGCCGTAGGGTGATGGGACGGGCTGACAGGAAGGGGAGGCCTGTGGAGCCGAAGGACCGGCGAGGACAGAGGGGCTGGGAGGGAGGGGGTCTCAGAACTGGGGCGGTCTCTCCAGGATCCCAGACACCCGGAGAGGACACTGCCTCTCCAGGAACGGGGCGCCCCGGCTCTACCTCCAGGGCCTGACAGGGCGAGACGGGTGATGGCGTCATCGAATTCACTTTGTTCTCTTAGCAGAGGACGTTGGAGGCGGAAGTGGTAAAGGATTTAAAGCAGGAAAATGCCTTGAAAGGCGGTGTTTACGTGGGTCAAGGGCAAAAAAGCCAAGGGCTCAGGGACCCGCCTCAGGGTGATTTTAACCCAAAGGAAAACAGTCGACTTTGAAAGGCCGACGTCTGGATTTACTGGGGGCAGAGGGCCGGATGCTAGGATTTAAAGTCCTGAAAGTGAAGTCAGGGGTACCGCGCAGCACCGATTTACACAAGAAACGAGAGGCTTGGTACAGCGTACCCGACTTCGCATTCTCCGGTTCCGCAAGGCGCTGCATGGGCGGTGTTTTAGTGGCCTCCGGGGCGGGGCCTGAGCGGAGTGCTACCGGCGAGGGGCGGGGCGAGGAGGGAACCCCGGGCGGCTGGGGACGGGAGGTGCCTCCCCGTACCTTGAAATTGCTGATTTTAACCGTCTGTCTGTAAAGAGGACTGTGAGGCGCAGGTCCAAGCTAGAAAAGTGTTAACTCTTGCTGCCCAGCGTGACTTGTGCTCTGCACTACCAGCTTCCCGGTCTTGAAGAAACGGCGCGTGCGCTTAAGGACTGTGGGCGGGGCCTGAGCAGAGCAGGACCAGCAAGGGGCGGGGCGTAAAGAACCCGGGCTTGCGCTACGACTGAGATGGAGGGAGGAGAGCCGGTAGAGGTGTGGTGTGTGCGTCCCTTGAATTCCCTCCCAAGTTTACCTTTTCTAGGTTTAGACATGCTTAAGGGTCTTTGTATCTTATGAGAGGATGGCTTCCTGCTTAGCTTAAGTTACTGTCTCTAACAAGTTTTAAATTAAATGCTTACAGTTGTGTGGGCCACTTATTTTGGAAATTTCTTTTTAACAAGTTGAAAACAGTTTAAGTCAAAAGCTATTTTTGCCAGCGGTTGACCGTTGGTCCTGAACTGAGAAAACTGTGATCTCAGTGAGGAGTAGCTGTGGGGCGGTAGTTGGATCCAGAAACATTGCCTGCAATCAATTAATTTAAGCAATTTAAATTAAAAAGAACTGGAGTTATCTGTGTAGGGATTACAAGTTAAAATATGAAATACAAAATTCCCAATGGGTAGAACGGACGATAGAATATTAAACGCTACAGAACAGCATTTTGTTTCAGAATTTTTCGCCATGGAAGGGTCTAGGCAGCCAGGAGGCTTCGTCCTTTTCTCTCCTGATTTTAGGCTCTTTTTATTTCTGAAGTGGGTCTACTCAGCCTCAAGTAGCTACCCCTTGGATGAGCTCACTGCGGTCCCAGTTGAAGTTACACTCGCCCTTTGTGCTTGGTGAGGGTGAGGAGGACTGTCCGGGTGGAGGGTCCTGCTTCTGCCCTCCTCTGCTGTTCCTGGCCAGATAGATTCTTTTCCACTCTTCCAGGTCAAAGGACCCCTGCACACATCAACCCCCTAAAGTGAAGGCCATACCAGAGGGTGTACTAGTTTCATTTTGTGTTCTTCTCATTAATTTGCTGACCATGTGCAGAGTATGTAACTACAGTCCAGGCTTGTCTGCATCAAGAATAAAATGGTAAGCCAATGGAATACACTCTACCACCTCATCCAGGTTATTTTTAAATCATGGAGACAAACACCGTCCTCTATCACTTACAGTCATGCAAGTCAAATGCCCCAAAGCAAAGGTCTGGCATGTGGACACCCCCATCACACCAGCTCTACCTTGTCCCCGTGTGGCTCATCACAGCTGGAGAAAAACACAGGCCCGAACTGACTGTTCTTGATTCAGATTCCTGGCTGTTCCCTCACATTCCCTGTGTGTTTGCTCCATACCTTTCCTATGGAGCTCCTCAAAAGTCCACCTCTACCTCTCCCATCTTTTTTTTTTTCAAAGACCCTGTTTATTCTCCATTGAGCTCCTGGAGCAAAGGAAGAGATCTCCTCTAACTGCCTCAACAGTCTGCCTCAGGGCCTGTGTTCTCTCCTCACTATTGACTGTGAATAGCCTGAACCCACCTCTGGCTGTTGGTGATCCTGAAATTGTGTCTTTATGCCAACTCCACTCTGTGTCAGGACAGCATGGCATTCTTCCTCCTCTGCTACACACACACACACACACAGGCCTTCTAAACCTTTTTATGCACTCTACCATCTTTAAAAGGGCTTCCCTGGTGTCTCGGATGGTAAAGAATGGGCCTGCAATGCAGGAGACCTGGATTCAACCCCTAGGTTGGGAAGATCCCCTAGAGGAGTGTACGGCAACCTACTCCAGTATTCTTGCCTGGGGAATCCAAAAGAGCCTGGCGGTCTACAGTCCACGGGGCTGCAAATAGTTGGACACAACTGAGCGACTGAGCACAACCACAAAAGTATACATTTTTGACAAAGCTGATCACAGGCATCATATTTATAAGGTTTCTCTCTAGTAAGAATTTTGTTACATTCCAGAAGGCTTAAACTTTGGCTACCCTTTGCCAAAATTTTGTGTGGTTTCTCTTAAAGATGTACATTCTGCCACCAAATGTATGTTAGGCACAGTTACAGGCTTTGCCACATACGTATGTTTTAAATGATTTCTCTCCTTGAGGGGGTCTCTGATTTTAAGGTCTGACTACCTACATACATTTTATCTCAATCATTATATTTGTGAGATTTCTATTATTAATTTTTCGATGATGCCCAAAGCTTCAGCTTTTAATAAAAGCACTGCCACATAGACTAGGTTTATGTTTCCTTTCAGTATGTATTTTCTGATGCCTACCCAGGTTTGTAAACTGAGTAAAAGCTCTGCCACACTCATGACATTTGTAAGGTTTCTCGCCAGTATGAATGATCTTATGTCGATTGAGATGCGAACCATCTGTAAAGGCTTTGCCACACTCGTTACACTGATAAGGCTTCTCTCCAATATGAGTTCTCTCGTGACGCCAAAGTTGTGAATTTTGGGTAAAAGCCTTATCACATTTATTACATTTATAAGGTCTTTCTCCTGTATGAATTCTCTGATGTGCCACAAGGCTTGAGTGCTGGATAAAAGCCTTGCCACATAAACTGCATTTGAGTTCTCCAGTGAGAGTTTTCTCATGACTGCAAAGTTGTGAATGCTGGACCAATGCCTTACAGCACACATCATATTTGTAAGGTTTCTCTCCAGTATGAGTTCTCTCAAGATCCCAAAGCTGCGAATGTTGGATCAAAGGCTTAACACACACATTGCATTTACTCGGTTTCTTTCCACTGTGCCTTCTCTGATGCCTACTAAGACTTGAAACTTGGGTAAAAGTTTTGTCACACTCATCACATTTGTAAGGTTTCTCACCAGTATGGATTTTCTCATGAATCCAAAGGAGTGAACGTTGCATAAATGACTTACCACATTCTTTACACTTATAAGGTTTCTCTCCAGTGTGCAGCCTCTGATGACTTGCAAGGATTGAATTTCGACTGAAGACCTTGCCACAGACATCACATTTGTATGGTTTCTCTCCTGTATGGATTATCTGATGGTTCCTTAGGGCTGAATGCACACTAAATGCTTTGCCACACTCATTACATCTGTAAGGTTTCTCTCCAGTATGGACTACCTTATGTTGAGTAAGATTTGAATGCTTCCTAAAGGCCTTCCCACACTCATTACATCTGTAAGGTTTCTCTCCTGTATGGATTCTCTTATGCTGAGTAAGGCTTGAGCGCTTCCTAAAGGCTTTGCCACATTCATTACATTTGTAAGATTTCTCTCCAAAGTGCACTGTCTGATGACTTACAAGGACTGATTTTCGACTGAAGACCTTGCCACAGACATCACATTCATAGGCTTTCTTTCTTGTATGGGTCAACTGATGTCTAGTGAGGTTTGAGCACTGATTAAAGGTTTTGCCACACTCTTTACATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGACACGCGAGGTGTGAATTTCGACTAAACACCTTACCACATACATCACAATTATAAGGTTTTTCTCCCGTATGGATTAACTGATGTCTGCTGAGGTTTGAGCTGTAAGGAAAGGTTTTGTCACACTCATTACATTTATAAGGTTTTTCCTTGTATGCTTTCTGGTCTTGTGTCAGTACTGAAGGGTGAATAAAATCATTCCCATACGGATTAGAAATGTTGGTTTGGACAATAGGAGAAATTGTCTGCAATGGTAAAAATGAGGTGCTACTGTTGCTAGTCTTGTCAGCTTCATTAAATTCATCAATTTTCTCTTCTCTTTTAAATATACACCATTCATCCTGAAAGCTTAATGCAAGCTTATTTTCAATAGGTTTGTTTCCTGGATCCCTTCTACCATGTTGATTTTTTCCATCAGTGAGATTTTCATTATTGTTTACAGGCATTCCTTTGTCATTTCCTTCATCATCTGTCCACTGACACTCAAAGACATGCATGTTTTCCTGGATTTCTGTGAAGTAAAAATCTCTGACTTCCTGACTTTTGTATCTTCCCAACATCACTCTCTGGAATACTCCTGTATCACTGTTTGCTTTTGGTTTCAATTTCTTGATCACGTGTATATGACAGACAGC TCONS_00087357 TCONS_00087357 r 5' 0 TCONS_00087357 TCONS_00087357 r 5' 0 EMBV3_00897 GTTGCAGAGACCAGAGGTTGAAATCAAGGCATCGACAGAGTTGGTTCCTCCTGGAAGTTC Gene BVV0102_189415 + 0 NULL GK000026.2:47184732-47299958 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151223 1 XLOC_092054 Coding TCONS_00151223 XLOC_092054 NonCoding Coding DOCK1 26:47185715-47193282 j TSS113094 623 1 TCONS_00151223_1 178 0.584269662921348 3 0.918054454136928 0 0 0 0 0.000808348643088663 0 0 0 0 0 0 0 1.21294476672899e-304 0 0 0 0.00226515940251383 0 0 4.55063091894557e-311 0 0 0 0 0 1.35620934231986e-05 0 0 0 0 XM_617359.5 DOCK1 PREDICTED: Bos taurus dedicator of cytokinesis 1 (DOCK1), mRNA. 6e-46 188 100.00 0.165329052969502 NM_001033420.2 Dock1 Mus musculus dedicator of cytokinesis 1 (Dock1), mRNA. 2e-39 167 90.83 0.191011235955056 TCONS_00151223_1 sp|Q14185|DOCK1_HUMAN DOCK1_HUMAN Dedicator of cytokinesis protein 1; 2e-17 81.6 65.08 0.337078651685393 0 noncoding 0 0 0 0 -0.0434034696662405 0.789504883767759 -0.000450472723804524 0.992225346890238 AACCAAGGCACAGAAAGATTGGGTTATTTGCCTCAGTATGTGGCCAAGCGGGTGGGATTTGAGCACGTGCAGTCAGAGCCCACACTCAGCCCTGAGCCGCACCATGGGTGGCTGGTCAGCCAGGTGCACGCAGAGGACACCGCTTTGTAACATCTCACAGCTGTGGAACAACTATTTTCACCTGGCCGTCGCTTTCCTCACTCAAGAGTCCTTGCAGCTGGAGAATTTTTCAAGTGCTAAGAGAGCGAAAATCCTTAACAATTGCAGAGACCAGAGGTTGAAATCAAGGCATCGACAGAGTTGGTTCCTCCTGGAAGTTCAGAGGGAGCACTTCCTGCCTCTCTCCTACCTTCTGGGGCGGCCCCATCCTTCGCTGTGGTCATGCTCCTTAGCTGCGCCTTCATCCTCACATGGCCCTCCTCCCTGTGTCTCTGTCCTTAAACGTCTCCTTTTCCTGATAAGCATACCAGTGGTTGGATTTAAGGCCTGCCCCGTCCAGCATGACCTCATGCTAACAGGATTCCTTCTGCAAAGATGCTCTTCCAGACACACTCGCATTCATAGACAGCAGTGATTAGGGTCTTAACAGATTTTTATGGAGGACACAATTCAACCCACACCAG EMBV3_40442 TTTGATTGGACCTTTGAACAGACAGTGGAAGATTCTTACAGAAGCAGAGATTGACGCTCA Variant GeneID:507213|PSMA6:NM_001045962:11_cdna 652^745 1 EMBV3_06712 GeneID:507213 21 GENE PSMA6 MGC134228 proteasome (prosome, macropain) subunit, alpha type, 6 EMBV3_22439 TGCTGTTTTATGGAGGGGTTGGAATTTGTACGGGCCTCTGGGTGTGGGGGAGACGAGTGA Gene GeneID:518905|SLC20A2:NM_001080280:76_cdna UTR3_Alt 2 NULL GeneID:518905 27 GENE SLC20A2 MGC139607 solute carrier family 20 (phosphate transporter), member 2 EMBV3_27469 AGCTCCGGGAACTAGCCGCCAAGGGTTACAAGCTGGTGATCTTCACCAACCAGATGGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30200 ACCAATGAACAGTTGCAGATACATTATAAGGACAGCAGCGTTCTCGGATGCTAGCTACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14990 TTTGTTCTTCTGCCTCCTTGGAGGAACCCAGCCCCGGTCCATGCTCCTACAAACTCGATT Gene GeneID:782382|PLXNA3:NM_001105013:85_cdna Constitutive 0 NULL GeneID:782382 X GENE PLXNA3 MGC151546 plexin A3 EMBV3_04898 GTGGCAAAGCCTTTTTTACGAGTTCGGACCTTTGTCATCATCAGCGAATTCATAGGGCGG Gene GeneID:540020|ZNF679:XM_002695351:32_cdna Constitutive 0 NULL GeneID:540020 18 GENE ZNF679 NULL zinc finger protein 679 EMBV3_19894 CCATGAGACCTCCCTCAGTGTTGGCATCCTTCATTGCCACTCGCTCAGTCATTCAACAAA Gene GeneID:532775|TMEM38A:NM_001083463:92_cdna Constitutive 1 NULL GeneID:532775 7 GENE TMEM38A MGC143431 transmembrane protein 38A EMBV3_14226 TGGAGGTGATGATTGTCATTGTTTAAAACATCCCTCTATGTCACCGCTAGGTAAGTGTTC Gene BVT0102_185350 + 0 NULL GK000008.2:12564521-13051740 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084379 TCONS_00084386 TCONS_00084384 TCONS_00084385 TCONS_00087383 TCONS_00229767 TCONS_00087384 TCONS_00084381 TCONS_00084380 TCONS_00253987 4 XLOC_051548 XLOC_052457 XLOC_139261 XLOC_156925 Coding TCONS_00084380 XLOC_051548 Coding Coding - 18:57656172-57683001 - TSS63215 4282 1 TCONS_00084380_8 469 4 0.840539734605636 0.0405501094178628 0.0281793251776275 0.0418107834461481 0.0173855122552235 0.0226084073643376 0.0033422009340258 0.0210385378770376 0 0 0.00156778954316369 4.26282572383648e-07 0.000577195102910093 0.00449514379565615 0.0152713683239324 0.00584679555410355 1.55070278093223e-08 2.82340479026258e-44 6.26431113339403e-34 0.0315628937945015 0.0290554048281621 0.00819353520644869 2.26155102656374e-16 5.70752170324558e-13 0.000128077771437412 0.0185408544876716 0.0139623963742992 0.0121952753923576 0.000122207100320767 5.07099037115923e-05 0.000585098041599878 XM_001787818.3 LOC788860 PREDICTED: Bos taurus zinc finger protein 479-like (LOC788860), 0.0 1205 73.10 0.489957963568426 NM_001256651.1 ZNF43 Homo sapiens zinc finger protein 43 (ZNF43), transcript variant 6, 0.0 801 73.49 0.310368986454928 TCONS_00084380_8 sp|A2VDQ7|ZN420_BOVIN ZN420_BOVIN Zinc finger protein 420; 3e-137 416 51.90 0.889125799573561 8 noncoding 0 0 0 0 -0.692510824680467 0.0240612736429091 -0.440208055814473 0.00123403644784711 TCCTGTGGGAGCATCAGTGTGGTGTGTAGGAAGTGCTCCAGGGGCTTCTAAGGGGAGGCCTGGGTTAAGGACGTGGCTCCTGGTCCATTTGTGAGAGCTGAGGCCTGGCTTCAGTCCAAGCAGAGGCAACAACTTCTGCTCTGCATGAGCTTTAAAGGGGCAAGTCAGTGCAGCCCACACACCCCATGTTAGCAGAATTTGGGGGACTTTATATGAAGAAAGAAGAGTAGACAACAACAACAAGTTGATAGATTGGTCTCCACGGAGGAGCTGATTGTCCTGAATCTCTCTCTGAGACAAAGGACAGGAGAGGTTGGCGTTTCCCGCTCTTTAGGTCCTTCTGCCTGTGAGGGTGTTGGGAGCAGGCGAAGGAGCTGTGCTGGCGCCTCTGAAGGTGTAATCTCATGACGCTGAGGTGATTCCTCCACAGTCTTGATGCGAAAACGACCCAGGGCAGCAGGAAGAAGAGGAGGAAATGGCAGCTTCTCAGGTCCCCTTTGGAGGAAAGGAAGAATCCCGGTGCTAGGTGTGAATGAATGAAGCGGATGACACAGGTGAGAGGTCCAAAGACCACAGAGGAAGCCAGACGTGTTCAGATGGTTTGGGGAGGCCTGCTTCACTAGAATGAGAAGCCTGGGTTTATGTCTGCCAAAGAGGGACATGACCGGCCCCGTTCTTCTGCTGTTTCATCTCCATCTTCTTCAGCTCCAGTGGGTTTTCCCTCAGTTTCACTGAGAGCCAAAACCGTCCTCCTGGTCTATGAGGACCTGCATACTCTCGCTGCTTTGGGGGACCTAGGAAAAGCTGCTAACAGTTCTGACAAACTCTGCCTTAAGGCCTTTCCAAATTTCCGTCTCTGCCTCAAGTCAGAAAAGAGTTGTGGAGCTCTGGGATTAGTTGACAAAATTCCAGAAATACTGGGAACAGATATATGCTTCCTGCTTTCTAATTTCCAATGGAAACTTCAAACATGGCTCTCTGAAGTTCATTCTCAGTCCCTGAAATCATAAAAGCGATATCTTCTCATGACACCCAGGGTTTGTTCCCAAAGAAGCCGTGCATAGGAGATTCATGTGTAATGTGCTCAGAAATTCTGAGAGCTCTCAGCTTGGAAATGTGTACTTAATGAAAGACTGGGAAAGTAAGGGGGGCTGTGAAGGGCCAAAAGGATGTTGTTTTAGATGTAACCAAATCGGGACAATTATTCATGATGAAAACATGATTGCCAAAAGAAATTGAGGATATGCATCAAATTGGGAAAAATTCCATTTGAAGTCAATAAGTTCTGCAGAAAAATATGTTTTTGTAAGCAAGAACCCACATGATTTAAAAAAAAAAAACAAACATATTCTCTGGTGTGAAATTTTGAAAACATGGAAAGTCATCTAGTCTATGCTACAAATAATCACTCAAACCAGTATGAATATAGGTTTGAATTAAACAGCCAGTCATACATGTCTGAGAGCCAGAGATTTGAAAATGAAGGAAGAAAATCTCACTATGATCAGTTTGAGAGATCCTTTAGTGAAGGCTCATTATTTTTCCACCAAGAAACATTTTCTCCCTATTCCAATATCTGTAATGTCAATAATAATGAGACAGTCTTTATCCAGCTGCCGTCATTCAATGGGTATCATAGTACAGATAATGCGGAACAACCTTCCATGTGTAATCCCATGAGTGAGGCCTTAAGCCAGAGCTCCACCTTCAATAATTACAACAGTATTTATGATGGAGCCAGAATCTACCCATGCCTTGAACCTGGGAATCACTTTGACCAAGACTCAGGTCTCATGAATCATCAGAGAACTCTATATTCAGAGAACCATAGTGATGAATGTAGAAATGTCTTTTATCAAAGCTCAAATCTTATTACAGATGGGAATATACATATTGAAGAGAATAATTACAAATTTAGTGAATGTGGTCAAGTTTCTAACCAGTCATCAGAACTTACTCAACATCTGAGTATTCATGCTAAGGAGAAACACAGCAAGTGGAATAAATGTGGGAAAGTCTTTCCTCAATTATCAAATCTAAATAGACACAGGAAAATCCACACCGGAGGGAAACGTAACCAATGTGCAGAATGTGGCAAAACCTTCAGCAAGCCCTCAAGCCTTACTCAACATCTCACTGTTCATACTGCAGAGAAGACTTACAAATGTCCAGAATGTGGCAAAGCCTTTAATCAGAGCTCAAACCTTAATCGACATAGGCGAATCCATACTAGGGAGAAACCATATAAATGTCAGAATTGTGGGAAAGCCTTTAACCAAAGTATAACACTTATTCAACATCAGCAAATCCATACTGGGGAGAAACCATACAAGTGTAAAGAATGTGGCAAAGCTTTTATCAGTTGCTCAAAGCTTAATCAACATCAGAGAATTCATACTGGGGAGAAGCCTCACACATGCAGAGAATGTGGGAAAGCCTTTAATAGTTGCTCACATCTCACTGTGCATCAGCGAATTCATACTGGGGAGAAGCCTTATAAATGTACAGAATGTAACAAAGCCTTTAATCATCACTCAAACCTTACCCGTCACCAGAGAATTCATGCTGGGAAGAAACTATACAAATGTACAGAATGTGGCAAAGCCTTTAATCAAAACTCAACCCTTACTCAACACCAGCGAATTCATACAGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCGAAACTCAACACTTACTCAACATCAGCGAATTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATTGAAACTCAACACTTACTCAACATCAGCGAATTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCAAAACTCAACACTTATTCAACATCAGCGAACTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCAGAGTTCAAACCTTAGTCGACAGGTGAATTCATACTGGGGAGAAACCATACAAATGTAAAGAATGAGGCAAAGCTTTTAATTGCCACTCAAATCTTACTTGCCATAAAATAATTCATACTGCCAAGTAGTCTTACAAATATAAATAATAGGACAAAGCCTTGAAGTGAGCCGTCACCTCACTCAGCATCAGAGAGCGTGTGCTGGAGAGAGACCCTACAAACGTAGTAAGTGATGAAAGAGGTTTGTCCTAAGCACACACATCAGAAAATGCCAGAGAGTTCATACTGGGAAGAATGCTTAATGCTGTAAAAAATGTACAAAATGAATTTAAAAACTCAGGTCTAAATAAATATCAGAGAATTCATCAAAGATAGCATTCATTCAATAACCCTTTTCTGGTATTACTTTAAATCAGGATATTATAGAAAATAATCCAAAGTGAAAACACTTAGAAAAATTATTTGTTACTTGGACCATAGGATCAAGGCAAGAGATGTTGGACAACATAATTATTATCATTGTATCCTTATTCATATTGACAGTATGTGAAAGTGAAATTTAATATAACTCAACTTTCAAATTACTATGTGCTATACCTTTAGTGTGTATGTGAATATGCTTTTTTAAAACTAATATTCTTGATCTTTGCTGCCTCAAAGTTAAAACCCTTCTATAATAGGTGGAAATAATTTTTATCTACTTTTTTATGTACTATTAAGGATCCTCTAATGTGAAATGTACAGTGGAAGTCTAAATGGAGGTGATGATTGTCATTGTTTAAAACATCCCTCTACGTCACCGCTAGGTAAGTGTTCAGAGAATAATTCTTTGTATTAAAGTAAGACAGAGAGTCGAAATTTTAAATAGTTGTGCCAATGGTTTTTTATGGATATAAAGATGGCAGCTCACTGAAATCCTGATGTATTTTTATAACAGCAATAACTAGAAGTCATGAATTTTAGTTGACATGGTAACAATCAGGAAATCTTCACAGATACCCAAGAAAAATACATGTAACCTTTTCCTGAAAGGTGATGTAATGAATGTACATCCTTGTTTACTAAATAACTGCTCTCTCTGTTTTGTAAACCATAAATATCACATTTCTCTGACCACTGTATCACAAGAACAAGAATGTTTCCAAATGCTTGTAATCTGTATTTTGATCAAAGATTATAGAGTAAACTTTGGAAAGTTTTATTTAGATTATGTGTGAATTTACTATATGTTAATCAATAAAAGTGAACGGCTTTTCATATATTAAACTTGATGTATATTTGAAGAAGTGTTCTCATCAGTAACAAGCTTCCAGGTGGTTCAGTGGTAAAGAAC TCONS_00084375 s 3' 7780 TCONS_00084375 s 3' 7780 EMBV3_15932 AATTACCAGGTTTTGCCAGATCGAAGTCATCCCAAACTACTGATGAGCGGAGGTGGAGGG Gene GeneID:505816|TRMT6:NM_001038040:892_cdna Constitutive 1 NULL GeneID:505816 13 GENE TRMT6 MGC134456 tRNA methyltransferase 6 homolog (S. cerevisiae) EMBV3_27853 TTGGCAGGAGGACACAAAAAGGAATCCAAGGTTCCTCCTGAATTTGATTTCTCTGCTCAC Gene GeneID:506175|NAA35:XM_002689817:13_cdna Constitutive 1 NULL GeneID:506175 8 GENE NAA35 MAK10 N(alpha)-acetyltransferase 35, NatC auxiliary subunit EMBV3_07316 TAACGCTAAAAATGTGATGAATGACAAACACCTCCGCCCCCCAACGAGCCCCTGATTAGG Gene GeneID:533382|PKNOX1:NM_001046350:41_cdna Constitutive 0 NULL GeneID:533382 1 GENE PKNOX1 MGC137943 PBX/knotted 1 homeobox 1 EMBV3_14669 CCTCTCAGACTTTCTGTAAAAGAAAACCAGGTTGTTGGTGACCAGTGGCCCTCCCGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18365 TATGCAGGGCGAAAGGCAGTGTGGTGATGTTTGGTGGGGTAGATAAATCCTACTGTCAGG Gene GeneID:100300337|LOC100300337:XM_002707847:78_cdna Constitutive 0 NULL GeneID:100300337 29 GENE LOC100300337 NULL hypothetical LOC100300337 EMBV3_25646 TGCCTGCCTGAATTGGATGAAAAGTTATAGAGACAATCTTTTAAGAACAGTTGCTACTCA Variant GeneID:540298|COQ3:NM_001076210:8_cdna 254^406 3 EMBV3_04021 GeneID:540298 9 GENE COQ3 MGC127187 coenzyme Q3 homolog, methyltransferase (S. cerevisiae) EMBV3_15223 CTTATCAGGCACCGGAGGACCCACATGGGAGAAAAACCTTACAAATGTACTGACTGTGAG Gene GeneID:768004|ZNF572:NM_001077064:59_cdna Constitutive 0 NULL GeneID:768004 14 GENE ZNF572 MGC134362 zinc finger protein 572 EMBV3_13715 AGCTTTGAGGAGTTGCCCCGGATAAACACTTGAACATATGCGCCACGGATTCTTTCCCAG Gene BVV0102_215061 + 0 NULL GK000004.2:44862358-44891362 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187157 1 XLOC_113205 NonCoding TCONS_00187157 XLOC_113205 NonCoding NonCoding - 4:44886540-44886648 - TSS139525 108 1 0 0 0 0 0 0 0 0 0 0 3.80971499158409e-05 4.23923581824055e-05 0.00231757345812255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.00892948454624193 0.944844698671248 -0.0980060837315705 0.248245369282513 AGGTTTTTTGTTTTTTGTTTTTTTTTTAAGCTTTGAGGAGTTGCCCCGGATAAACACTTGAACATATGCGCCACGGATTCTTTCCCAGGCATTCGAGTTAGAATGTAC TCONS_00183828 TCONS_00183829 TCONS_00183830 . 3' 4715 TCONS_00183828 TCONS_00183829 TCONS_00183830 . 3' 4822 EMBV3_37427 GAATTTGCCCCAAACAGGAACACATAGCAGGTAAAGATGAGCCCAGCAGCTACACATGTA Variant GeneID:538680|BCL11A:NM_001076121:149_cdna 612^713 1 EMBV3_13306 GeneID:538680 11 GENE BCL11A MGC139389 B-cell CLL/lymphoma 11A (zinc finger protein) EMBV3_14495 ACACCTTTGTTGGAATGGAGGAAAATGGACAATTCAGTCAGGATACTTAAGATGGCAGGC Gene BVT0102_330095 + 0 NULL GK000003.2:106246151-106259850 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20640 ACTTTAGTGCATCCATTGGGACCCCTGACCTCCACCTCCAAGACCTGGAACCTGAAGATT Gene GeneID:541098|IGDCC4:XM_002690523:539_cdna Constitutive 0 NULL GeneID:541098 10 GENE IGDCC4 NULL immunoglobulin superfamily, DCC subclass, member 4 EMBV3_35737 TCTCCACCACACAAAGTGCCTTTCTTTCCACCCAAACTCCAGTGTACCACCTAAGACAGC Gene GeneID:100139115|SURF1:XM_002691662:409_cdna Constitutive 4 NULL GeneID:100139115 11 GENE SURF1 NULL surfeit 1 EMBV3_26480 GACCATGCTCACTACTTCCATCGCTCCAGTGCTGAACCCTTTCATTTACACACTGAGAAA Gene GeneID:782296|LOC782296:XM_002687441:225_cdna Constitutive 0 NULL GeneID:782296 5 GENE LOC782296 NULL similar to olfactory receptor 772 EMBV3_17171 GCCTTGTGCTGACAGTATGTGGGTACGTGAGGAGAAAAAAGGTTTGAAATATACGGAGCC Gene GeneID:782714|LOC782714:XR_083763:8_cdna Constitutive 0 NULL GeneID:782714 9 PSEUDO LOC782714 NULL similar to ribosomal protein S15a EMBV3_31767 GCAGATGGGGTGGCCCCAGCGCAGCCTTCGATTCGATATCGCAAGGACCGTGCGGTGGCC Variant GeneID:616206|LOC616206:XM_002688855:201_cdna 622^702 1 EMBV3_29435 GeneID:616206 7 GENE LOC616206 NULL similar to Uncharacterized protein KIAA1543 EMBV3_25847 TAGGAGCAGTAAATTCTGGTTACACTTAGCTCAGATATGGCAAGTGTGATCTGGTGAAGG Gene BVT0101_015190 + 1 EMBV3_35305 GK000021.2:45794112-45794780 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32621 CCCGTACGCCTCTTCAGGGGCCGGACAATGGTATGCAGAGATGCCCAAGGCTGAGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10472 CCTTAACTGTTCATTCCTTCCTGAGGTTTTTCCCCCTAAGCAATACGTGAAATGAACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37032 TGCTGGCTGTGGTCATCGGTGTCTTCGTGCTCTGCTGGTTCCCTTTCTTCTTCAGCTACA Gene GeneID:516422|ADRA2B:XM_002691129:122_cdna Constitutive 0 NULL GeneID:516422 11 GENE ADRA2B NULL adrenergic, alpha-2B-, receptor EMBV3_14050 TCTACGATGCGGAAAAGCAGAGGCCTCGAGGTGGAAGTTAAACGGGCCGAACCTCGGGAC Variant GeneID:614783|DAZAP1:XM_002689174:223_cdna 578^660 3 EMBV3_17704 GeneID:614783 7 GENE DAZAP1 NULL DAZ associated protein 1 EMBV3_41463 CACCTCACAGAGGCGTTATGAGTGCAGTGAATGTGGGAAAGGGTTCAAGAGGAAAATCAC Gene GeneID:100299025|LOC100299025:XM_002695491:246_cdna Constitutive 0 NULL GeneID:100299025 18 GENE LOC100299025 NULL similar to zinc finger protein 587 EMBV3_19983 GAGAAGCATATGGGAAGGGCAAAGTGAGCTTTAATACTTTCTTCCTCGCTCCCTGCGGTG Gene BVV0101_039282 + 0 NULL GK000006.2:7070188-7104682 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202390 TCONS_00202392 TCONS_00202396 TCONS_00206685 TCONS_00202403 TCONS_00202391 TCONS_00202397 TCONS_00202388 2 XLOC_123964 XLOC_125206 Coding TCONS_00202391 XLOC_123964 Coding Coding PDE5A 6:6874054-7074480 j TSS151909 6760 1 TCONS_00202391_7 865 22 0.966381439441187 0.00138367479286804 0.000666017164398093 0.00136690099545658 0.000799990202920034 0.000614553190170983 6.18984420222203e-05 0.000503589254740732 0.000197715090945383 0.00138143866129217 3.30499655708166e-05 3.69715658304815e-43 3.57516920484925e-09 0.00026631962481305 0.000281709674196863 3.63776607018467e-09 8.06666360928151e-07 1.76269084079554e-10 1.08724736620132e-05 0.000988746121669827 0.00122972624123972 7.0990427534263e-05 4.92995860628136e-05 3.02786256984611e-17 4.32232861871948e-38 0.00234687936582777 0.00153196717171792 0.000713579861339009 3.07535002306375e-20 5.20632363588959e-09 0.000331871904767593 NM_174417.2 PDE5A Bos taurus phosphodiesterase 5A, cGMP-specific (PDE5A), mRNA. 0.0 5227 99.86 0.430621301775148 NM_001083.3 PDE5A Homo sapiens phosphodiesterase 5A, cGMP-specific (PDE5A), 0.0 4424 87.71 0.516568047337278 TCONS_00202391_7 sp|Q28156|PDE5A_BOVIN PDE5A_BOVIN cGMP-specific 3',5'-cyclic phosphodiesterase; 0.0 1810 100.00 0.998843930635838 4 coding 1 1 1 1 0.0374235439265285 0.800239508252851 0.0562218407746473 0.420420218195674 GGGAGGGTCTCGAGGCGAGTTCTGCTCCTCGGAGGGAGGGACCCCAGCTGGAGTGGAAAACCAGCACCAGCTGACCGCAGAGACACGCCGCGCTGATCATGGAGAGGGCCGGCCCCGGCTCCGCGCGGCCGCAACAGCAATGGGACCAGGACTCGGTCGAAGCGTGGCTGGACGATCACTGGGACTTTACCTTCTCTTACTTTGTTAGGAAAGGCACCAGAGAAATGGTCAACGCATGGTTTGCTGAGAGAGTTCACACCATTCCTGTGTGCAAGGAAGGAATCAAGGGCCACACGGAATCCTGCTCTTGCCCCTTGCAGCCAAGTCCCCGTGCAGAGAGCAGTGTCCCTGGAACACCAACCAGGAAGATCTCTGCCTCTGAATTTGATCGGCCGCTTAGACCCATCGTTATCAAGGATTCTGAGGGAACTGTGAGCTTCCTCTCTGACTCAGACAAGAAGGAACAGATGCCTCTAACCTCCCCACGGTTTGATAATGATGAAGGGGACCAGTGCTCGAGACTCTTGGAATTAGTGAAAGATATTTCTAGTCACTTGGATGTCACAGCCTTATGTCACAAAATTTTCTTGCACATCCATGGACTCATCTCCGCCGACCGCTACTCCTTATTCCTCGTCTGTGAGGACAGCTCCAACGACAAGTTTCTTATCAGCCGCCTCTTTGATGTTGCAGAAGGTTCAACACTGGAAGAAGCTTCAAACAACTGCATCCGCTTAGAGTGGAACAAAGGCATCGTGGGACACGTGGCCGCTTTTGGCGAGCCCTTGAACATCAAAGACGCCTATGAGGATCCTCGATTCAATGCAGAAGTTGACCAAATTACAGGCTACAAGACACAAAGTATTCTTTGTATGCCAATTAAGAATCATAGGGAAGAGGTTGTTGGTGTAGCCCAGGCCATCAACAAGAAATCAGGAAATGGTGGGACATTCACTGAAAAAGACGAAAAGGACTTTGCTGCTTACTTGGCATTTTGTGGAATTGTTCTTCATAATGCTCAACTCTATGAGACTTCACTGCTGGAGAACAAGAGAAATCAGGTGCTGCTTGACCTTGCTAGCTTAATTTTTGAAGAACAACAATCATTAGAAGTAATTCTAAAGAAAATAGCTGCCACTATTATCTCTTTCATGCAGGTGCAGAAATGCACCATTTTCATAGTGGATGAAGATTGCTCCGATTCTTTTTCTAGTGTGTTTCACATGGAGTGTGAGGAATTAGAAAAATCGTCAGATACTTTAACACGGGAACGTGATGCAAACAGAATCAATTACATGTATGCTCAGTATGTCAAAAATACCATGGAACCACTTAATATCCCAGACGTCAGTAAGGACAAAAGATTTCCCTGGACAAATGAAAACATGGGAAATATAAACCAGCAGTGCATTAGAAGTTTGCTTTGTACACCTATAAAAAATGGAAAGAAGAACAAAGTGATAGGGGTTTGCCAACTTGTTAATAAGATGGAGGAAACCACTGGCAAAGTTAAGGCTTTCAACCGCAACGATGAACAGTTTCTGGAAGCTTTCGTCATCTTTTGTGGCTTGGGGATCCAGAACACACAGATGTACGAAGCAGTGGAGAGAGCCATGGCCAAGCAAATGGTCACGTTAGAGGTTCTGTCTTATCATGCTTCAGCTGCAGAGGAAGAAACCAGAGAGCTGCAGTCCTTAGCGGCTGCTGTGGTACCATCTGCCCAGACCCTTAAAATCACTGACTTCAGCTTCAGCGACTTTGAGCTGTCTGACCTGGAAACAGCACTGTGCACAATCCGGATGTTCACTGACCTCAACCTTGTGCAGAACTTCCAGATGAAACATGAGGTCCTTTGCAAGTGGATTTTAAGTGTGAAGAAGAACTATCGGAAGAACGTCGCCTATCATAATTGGAGACATGCCTTTAATACAGCTCAGTGCATGTTTGCGGCACTAAAAGCAGGCAAAATTCAGAAGAGGCTGACGGACCTGGAGATACTTGCACTGCTGATTGCTGCCTTAAGCCATGATCTGGATCACCGTGGTGTCAATAACTCATACATACAGCGAAGTGAACACCCACTTGCTCAGCTCTACTGCCATTCAATCATGGAGCATCATCATTTTGATCAGTGCCTGATGATCCTTAATAGTCCTGGCAATCAGATTCTCAGTGGCCTCTCCATTGAAGAGTATAAGACCACCCTGAAGATCATCAAGCAAGCTATTTTAGCCACAGACCTAGCACTGTACATAAAGAGACGAGGAGAATTTTTTGAACTTATAATGAAAAATCAATTCAATTTGGAAGATCCTCATCAAAAGGAGTTGTTTTTAGCGATGCTGATGACAGCTTGTGATCTTTCTGCAATTACAAAACCCTGGCCTATTCAACAACGGATAGCAGAACTTGTTGCCACTGAATTTTTTGACCAAGGAGATAGAGAGAGGAAAGAACTCAACATAGAGCCCGCTGATCTAATGAACCGGGAGAAGAAAAACAAAATCCCAAGTATGCAAGTTGGATTCATAGATGCCATCTGCTTGCAACTGTATGAGGCCTTGACCCATGTGTCGGAGGACTGTTTCCCTTTGCTGGACGGCTGCAGAAAGAACAGGCAGAAATGGCAGGCTCTTGCAGAACAGCAGGAGAAGACACTGATCAATGGTGAAAGCAGCCAGACCAAGCGGAACTGAGAGACCTATTCATGCAGAGCTGAAGTTGACAGATGGTGTCTTCTGCAGTATGCCTAGTTTTGCTATATACTGTACAGATTTGGTTGTATACTTTGCCACTGCTGTATTTTTATTTTTGCACAATTTTTGACAGCGTAGCATGAAATGTTTTTAGAGGACTATTGCATATTTTCTGTACATTTGTTTTATGCCACTGAACTGAGATTATCAACGACACCCACTCTTAGCACGTGAATAAGAGCACTGTTTGTAATACTTTGTGTACTGCAAGGTACAAGTTGCATTCTTGCACAGAGGCTAATTTGGGGTTTGTTTTTTTTTTTTTCTGGGGATTTTAAATAATTGGTTTTGTGTTTTCTGAATTATCAATCTTTCAAGAATGTTTAGAATCTTTTCTTTCTTAAAAATAGTCTAGGAGCAAACTGAATATATTCTGTGACATTTAAAACCTTCATAGAATAGAAAAAAGTGTTGACTTTTAAAGCTTGTTGGATTTTAAAAGGAATTGGCTATATTTTTCAACACTGTATTACCTTAACGAAAGAAAGTTAAAACTCTAAACAAATGGAAAGTACTATAAGGCAGTATTGTAAAGAAAAGGCATTACTTAATTAATTTGGTTTTTTGTTGTTAGAGAACAGGCAAGAGAGAGGTTTCTTATTTCAGTGCAATACATCTCCCCAAAGGCTACCCATAAATGCTCACTTCGACCTAACAGACCTGGTAGAGAGCAGGAGGAGCCTGGGAAGAAGACCCAGCCCCTGAGTCTCGAGGGATGAGCCTGCTGCAGAAATGGAGCAGCCAGGACAGCCGTCAGGGAAGAGAACGCTCCACCGGAGGACACCCTGACAGTCAGGAGGTCACACACTGAGCTTCCTTTTCGTTCACCTCACGAGTCATCGTTGTAAGTCAACACTTCAAAACACAAGCGATCATGGGCGCACAGGCCTGAAATGAGCTGTGACCACTCAGGATAAGAGGGTATGCACCCTAAACTGGCCCCTGAGCTCGTACTTGGTGGGATTTACTTCTCATAACTTTTAGTCCATTTAGAAAATGCTAATGTTTTCTTAGAACTTGAGCTCATTTAATTGTATTCCCACTGTACATATGTGCCCCTAAAGACACTGGTATTCCATATAAGAGAAGTAGATAACGAATTGAGAAACTGGTTCCGGAAAAGAAAATCTGCTCTAAACGTGCAGTAATGTTTGGACTTGGGGAAGAATAGGAAGACAGGCGTTTCACCTGTTCACGTCCCTCCACATCCCTGAAAAAAGTTTCTGAGTTTCTAGCACTGGTTTGGATAGGAAAGCTCTTGGGGATATGATAATGCAGCATTCTAAAAGAATTTTCACTAAAACATATTTTCCATTTATATATATTTTTTCCCTAAACATCCTAAAATTCAACATATAAGTTTTGAAAATTCTAAGTGTGTATATGTATCTTGACATTAATTTTATTCTTACTCTTCAGTAAAAAACAAAACAAAACATATTGTATTGCCATCATTTTGTAGTGGTAAGGGAGAGTCTAGAAGGCTATCAGTTGTTTAATGCAGTATGTATTACTGTTGTAACACTTGTAGCTTCAGCATGTTATTCTGTTTTTAAGTCATACACATGAGATCTGAGAGTTTGCCTCTTGGTGGCACTGGTGTGTAACTTACACAGACTGTCACTAACATAACATATCTTCATACCAGGATATGCCTATGCATGCATACACAATTCCTTAGTACCAAAAATTCGTTTGAAGAATAGCAGTCTTTTCAGTAACCTATCTTTTTACCATACACATTGTGATTTAACAGTTATGTGAAAATCTGTAATCAAATATTTCAGCAGTTTGTTCAGGGCACTCTCATGTATGTCATTACAACTTTTACATACACAGTAGACTATGTATAGAGAATTTGTATGTATGTCATTTTAACAAGTAATATGATATATTTAGAAATTCTTGGCGTACTTTTAGATAATGGCTTATTTTACCTTACTAGTTTAGAAACTGAAAGAAGTTGGGCAATGCCATACCTATTTTATCTTTGGGTATTTTAGTTCATACAGAAGAGTGCTTCTTGAAGCCTGGTTAGTTGGTTCAAATACTTTTTAACTTTTAGGAAAATCATTCCATACATGGATTAATACGTGGTACATGGACACAAATTCTTATGTGAATATTTCCTTTCCAGTATCCTCTCAAGTTGGGGGAAAAAATGCATATATATATATATGTATTTTTTTTCTCTCACCCTACCCTATATTTATATTACCTGTAACTAGCAAGAAATTGTTCTAGATTAGTTTGCTGTTGTTCTAGCTGAGTAACATGATACCATTTCATTTCAATTTTCAGCCCCAGAAGTCCGCACTACTTTGCTAAGTTGTGAATGATGTCTGTAAGATTGCCTGCCCGGCCTTATACACTCACAGGAGTGGCCTTTGCCAGTCACTAACCCGTGTGAACTCGAGTTTCAGTGTCATAACTGCTGTGAGTGTGAACCAGTTGTGCCGCTGAAGGAGTTGTGTTTGGGCTAAGCCTTCCCTGCAAGGGGGATGTCGCAGAGGACAGCTCCTGTGTCAGAGCTGGTGGGTCCTGGAGACCACTGTCGGAAAGGAGATGGCGGGCCCCAAAGCAAGGTGTCGAATCCCATATGTTATTTCCTATGTTGAGTTTCCAAGACTGGGGAGGAAAAAAAAAAGGTACATTTCTTTGGCTCCTAGTGCAGATCATTAGTTGTATGAGATTTAGAGCTCTCTCAGCACCTCGCCTCAAGGTACAAATGCCACCGATCTCCTTACTACAAGTAACAGTTTCCTCCCACGGGAGTGTTGGAGATGAGAAAGTGTATGACAGCGTACTGGAAATAATGGGTTGCAAGAGGAAACGGGTCACAGATATATTCTCACCTAGCTGTGAAGTGCCTTTATTTTCAGCACAGAGCACAAATGTCAGACCAACTCCAATTTGATGTTCTGTTTCCCTGTGTTTTCCATCAGATTGTACTCCTAAAACTTTACAGGCCATCAGAAGAAATGCTGTTTGTTTTGTTTTACAAGCTTGATTTAAGATGGGATAGGAGGGAAGAGTATAATTGCTCTCCTCGCCTAGGAATAATTATAGTTAAAACAAGGTAGTATAACGCAGTGCTCAGCATCCGACATGCCTCAGTCCACCTTTTACTGAGTTCCTGCCACATGTCAGGTACTGCACTCCACAGTGGAGACCACACAGCGACCTCATAAGAGACTCACCAGCTTCTGCTTCTGGCGATTTAATGTGAAAATATAGGGTACAGTTATCACTTTCACTTATATGTATTATACAGTTTTTCAAGGACCTTCTTTACCTGGAACTTATTAAGAATCCGTCAGTGAACATCCTGTCTTCCTATAAGTATGCATCACTTAGCCTGTTGATAGCTTAAAGAACACCTTATGTTAAGTATGGAGTCATATATTCCACCGTATAGATTATTTTTCCATATACTAGCCAGGTAGAGATTACTCAAGAGTTCTCTCAGACTGTTAAACTGCACACGGTTTTGGACCCCTTCTGCTCCACCGCAGGGAGCGAGGAAGAAAGTATTAAAGCTCACTTTGCCCTTCCCATATGCTTCTCAAAAGCCTATGTAAACATGTCTTAATGAATGTTGTTGAAAGCCATGTAAATAGTTAAAAACATAAATTTCTAATACAGTTTAAGGGAAGAAAAAGCTTATGAATCATCACTAGCCACTTAATATCTATTTCTTATACCTTTTCAATACATTTGAACAAATATATAGTTTCTAGCACTATTTTTATACTAGAATAAACAGTTATTACTATGTATATTATGTTTAGCATTTAAGTCATTTTAAATAATTGTGAATGTTGGTTTCTTGTATTTCCTCTCCCCCACCATGAAAACCATTTCATATGACTTTGACAAAATCACTTTAAAAGAAGACTTACCCACCTATGATGCCAATGATCAGGGTGGTTTTTCCATTGTGCAGACTCATCACTTGTCAGCTGTTTCCTCATTTTGCCATGCTGTGTAAAAATAAAAAAAAG EMBV3_40752 CATGGGTGCATTGTAAATGTGTGCCCGATAATGTTGTGGAAGTGGTGATTCCCTGGGGTC Gene GeneID:512694|RBM17:NM_001101083:13_cdna UTR3_Alt 2 NULL GeneID:512694 13 GENE RBM17 NULL RNA binding motif protein 17 EMBV3_30474 GTGTGAAGGATAGCTGTTTCCCAAAGGCCCATCCCTGTTCTGAGTATTTGCTCCAGCTCA Gene BVV0102_166010 - 1 EMBV3_29926 GK000023.2:10734956-10748953 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134035 TCONS_00134040 TCONS_00134038 TCONS_00134039 TCONS_00134036 TCONS_00134037 1 XLOC_081285 Coding TCONS_00134038 XLOC_081285 Coding Coding PPIL1 23:10746605-10769743 = TSS99999 4260 1 TCONS_00134038_2 166 0.073943661971831 4 0.816052210744695 4.78209638963321e-05 1.76067525517445e-05 3.41805734202355e-05 2.49163667556183e-30 1.75934357228133e-26 5.82000057732938e-13 6.88547355354298e-24 1.46934381080576e-12 2.24747720261567e-12 2.37075356386866e-06 2.24149145375892e-05 1.23428802326208e-13 5.55706198316834e-28 0.000115381079957427 5.62660268637611e-13 0.000360182393476378 0.000393196959999235 0.000137310295672272 3.93306845588834e-07 8.15247922785102e-06 3.16825532056195e-13 0.000205689379044713 0.000135680922851189 0.000534526338834137 1.06911691513267e-08 1.09118778453208e-12 1.123440660052e-07 0.000180651843287641 0.000185120061414313 9.98785059898287e-05 NM_001014869.1 PPIL1 Bos taurus peptidylprolyl isomerase (cyclophilin)-like 1 (PPIL1), 0.0 2643 100.00 0.343661971830986 NM_016059.4 PPIL1 Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 1 (PPIL1), 0.0 1633 81.35 0.406338028169014 TCONS_00134038_2 sp|Q5E992|PPIL1_BOVIN PPIL1_BOVIN Peptidyl-prolyl cis-trans isomerase-like 1; 4e-123 348 100.00 0.993975903614458 1 coding 0 0 0 0 0.0254640119009211 0.839347603750227 -0.00798454646182613 0.864978514952084 TCATCTCTATCCCCTTCCGTTCTCTTCCTCTTCTTGGGTCTCAGCACTATTGTGGGACTAAGAAATTCTTCCAAACGTAAGGTTAGGCTTTAACTCTATTAGAAGTGCAGATTTGCCGGTCGGTCACACCCCACCCCATGCCTAAACGAACCAATCAGAGAGTCCATAGAATGGCGCGGTCCCTCTCCACTCGGAGATCACCTCCAATGGAGCTTGGCACTTTTCTCCGTCCTAGGAGACAGCTTGCTTTAGCCTCACGCTCTAGATTCTCGGCCTTGGAGGTGCGGGTGGGGGTGGGGGTCTTTCCTCTGCCTGGTCTCAAATCCCCCCAATTTTGGCATCTCTCGAGTTGAACGGCGGGAACCGGAAGCCGGTTGCAGCAGCCGCGGGTCCCGGCGAATCGACGCCGGAAGTAGCGATCGCCTCAGGAGTTTTCCGCCAGCTTCGCCATGGCGGCGATTCCTCCAGACTCTTGGCAGCCGCCCAACGTGTACCTGGAGACCAGCATGGGGATCATCGTGCTGGAGCTGTACTGGAAGCACGCTCCAAAGACCTGTAAGAACTTCGCTGAATTGGCTCGTCGAGGTTACTACAATGGCACCAAATTCCACAGAATCATCAAAGACTTTATGATCCAGGGAGGTGACCCAACAGGGACAGGTCGAGGTGGTGCGTCTATCTATGGCAAGCAGTTTGAAGATGAACTTCATCCAGACTTGAAATTCACAGGGGCTGGAATTCTCGCGATGGCCAATGCAGGGCCTGACACCAACGGCAGCCAGTTCTTTGTGACCCTGGCTCCCACCCAGTGGCTTGATGGCAAGCATACCATTTTTGGCCGTGTGTGTCAGGGTATAGGCATGGTGAATCGAGTTGGAATGGTGGAAACAAACTCCCAGGACCGCCCCGTGGACGATGTGAAGATCATTAAGGCATACCCTTCCGGGTAGACTTGCTGCCCTCTCGGCCACACCCTGGTCTTCGGAGATGGCCCCAACAAACCAGTTTGCAGATGACCTAGAATGACTCATAACTCTAAACTTCATTTTGGCCTTGCAAATCTGAGGCACTGAGGAGGCCTGGGGTCTTGGGTGAGTTAGAGATGGAAGTATATTTTGATCAGATGCTTCTTTTCTCTTCCCCAGTGCCTGCGTTGACTGAGCATTTGCAGAATGCTCTTACACGATCTTTCACAGATAGCTGCTCACTGCACATGACCCACACTGCTCCTTCTCGTGTGTGTCTGCTTTATGTACTTCAAACAAAGTGAAGCCAACTCTGTCATTTCGCAGTGCCTAACAACCTCTTGTAGAAATTTATATTCTGGCCTACACTGCAGTCTTTAGTGGCTGACAGCCATAGAATTCAAAACCAAGTAGTGTCTATCAGCCTTCTTAACTGTGTGCGCCCCCTATTTCGTCTCTTGCATTTGTTCTTCCAGGGATTGTATGCATCTCTGTATATATTTTTCCTCTCAGAACATCAACACTGCTGTTTCTGACACTTAGACATCCCACGCAAAGCCACTTTGAATTTTTGCCAAATGAAAAATGCATCCAACAATCAAGTTTCTAAGAAGGTGTCAAGTGGGGAATGATAATGTGTAATAATCGAGAAATGAATTTATTAAAAAGAAGCAGGCGCATTGACCATTTTTTCTCCAGGAAGGAGTAGAAATCTGTAGTGAGCATAAAGGCAGACTGTGAGTTCTCTTTAAAAAAGCAGTATTCTCATAAAGGAGAAGCACCACTTAAGTTTTTTTAAACTAAGACTTAAGAGAAATTAGGTAAGAGAGTTTATATATATATTTTTAATCTTTGTAGTTTTTTTTAAGGAGGGAGTGGTGAGGGAAAGGAAGTTAATACCTATGGAATGCATAGAAACTTCCAAAATAAAATGCCATTGATGGTTGAAATCACTGCTGTAGTCTGATCTTAAACATTGTACGAGGTTCTAACAGCCATTCGGACCTCTGAATCATCTCAAGTAGTATTTATTGTAGGACTGATCTTTAGGCTTTCATATCATTTTAGGTTTGGGGATCTCTAGTAGATTTCTGCCATCCAAGAGGAGGTTTGACTTTTAAATGGAGGTACCAGAGAAGGAAGTTAAGTGATGTCGACCAGCATTTCTGAGTGAGGGGGACGCCCCTGTGGATTAACCACGTGGATGTGCTGAGATACCTGAACCATTAGGTGAACTTGCAGGAGATACACCCACGTGTCATCATGAACTCAGGGGCAATGTGTGATGTGGTATTTGCTTTCTTAAATGGATAGCTCCTTGACTGAAAGAGGATTATAGCTTAAATGTTCCTCCTGATCCCTCTCTGATTTTGGAAATGGTGATTTACTTTATGGAATGGCCAAACAAGGTTCTGTTCCTCAGGCTTTCCCCATGCACATCTTTCTCTTTTCTCTCAATGACAAGAAAGCAAAACCCAATAACAAACTATGTAAATGACTCTGTAACCTCCCAGAGATGGTTTTAGGGTACAGAATTCTATTGTAGAAAAGTAGCAATACATTTCTTTCAGCTTGGACTGGGTGGACATAATTGGATCCTCCTCTGGGAGCAAGGAATAAGACACTCAACCACTCACCTTCCAGAATTATAATCCTGAAAATCCCTGTTTTCACCCAGGTCATGGGAGTGGTGGAAATGTGTTTTGGCTACTTTGAGAAGTAAACAAGGTTGTGATTACGTTGGGAAGAGAGCCACACAGGCACAGTTCCTTGTTTCTGGATGAGTATACCACACGTATGCCATGGTGATCATATATGCAAGCACATGCCAGTTTTCAGAAAGGATGTGACCTCAAAGAGTAAAACTTGAACTGAGTCACAGTTTCTAGTAATTCTGCCAAGTAGCCAGAGATGTAGAAATTCCTGATTCTATGTAAAGGGAGCTTGTGTAAAAGGAATCCTGGTTGACCCTTTTGTCATATGAATGTTCACATCCTCTCTGGAGAAGTACAGTTAGGACAAGTCTCATGGAAGTGGGATGTGCTGGGACACAGCTCATTTCAGTCACAGCTCAAATAGATCAAGATGAGGGTAGGTTATGTGGAGAACGCAGAATGAGTTTGTAACTTAGATGGAGATTAATGAAATAGGTCATGTACCCAGACTGAAAAGTGCATAGTCCCCACGGGGTCTAGCCCAAGCTTCTCACACTTTACCACACAGAAGAATCACTGGGGAGCCTGCCCTTAGAAAGCGGATCCAGATTCAGCATCTGGCCAGAGATTTCTGCGTCTCTGACCAGTTTCCAGGTGATGGTGATTGCTGGTCCAGAGACCACACTTTTGAGTAGTGAGAGGCTAACTCTCACGTTTGCCCATCATGATATTGGGGCAAGGGGGCGGTTCTTAAGGGCATGGGCAGTCAGGACGTTAACCTTTTCTTCTGCCTCCTAGACCAGTAGTGTTCTCAGAAGATTAAGAAGATTGAAGGGATTCAAAGCACAGGGTGAGCTTTACCGGCTCTTGGCTTTGGCAGCTAAGGTGCAGCTTTAAGAACCAGTGCCCTTCCACCTTCCATTCCCATTTAGTGTACCATGGACATCAGACCACGTGTGACCCTGAGATCCTGTGGGCACCAGAATGACTAAGATGGTATGATTTAGTAGACATCACAGAAAGGCAGGGATATGTCGTCATCGGTCATGACACTGAGGGTCAAGGGCTCTGAAACCAGACTGCCAGGCCTCAGAGCCCAGCGTCACCACTCAGCAGAAGTATGATGAACATGTTCCTTAATCTCTCTGTGCCTTGGTTTAGTGGTCCTTACCTCTTAAGGCTGTTGTGAAGATTAAATGAGCTGGAGCAAATACTCAGAACAGGGATGGGCCTTTGGGAAACAGCTATCCTTCACACCGGTGGTCCTCGAAGCCACCGCACACCTCTCCTGCCTCTTCACCCCAACATTTCAGCGGCCTGAGGTTGCACATCGCTCCCTCCCACCAGGCTAAACTCCAAGAGCAAAAACCCTTGTCTTATTCCTCTCTGGGAGCCCCCTCAGCACCTTATGCAATTCTTTGAGAGCTTATTACTGAATAAATCAAATTAAAAATTGTTCTCTGTCAGGAAAAGGTTGAGATCCATTTGCAGAAATAGCTTTACCAACCCAAGCTTTAGCGTGTACGGCAGCAAAGCCTTTCCACTAAGCCCTGTGGAAGTCCTCAGCTTGATTTATTTTTGGATTGCGTCTCCAGAATATGTCAAAATAGCTTTCCCTGCACACGGGAAACGATTCCTAC EMBV3_30076 TCGGTGACATGCAGTTTGTGCCCACTTCTCTTCAGACACTTCCCCAGTCAAGTACAGATG Gene GeneID:540046|LOC540046:XM_002698895:49_cdna Constitutive 0 NULL GeneID:540046 28 GENE LOC540046 NULL similar to Protein GCAP14 homolog EMBV3_00010 GCCAGCCTGGTATCACCGCTTGGGATTCTGTTTTGCACGTGCTGGTGTTTGCAATCAAAA Gene BVV0102_081716 + 0 NULL GK000023.2:7820914-7841999 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132161 TCONS_00133883 TCONS_00132160 2 XLOC_080719 XLOC_081245 Coding TCONS_00132161 XLOC_080719 NonCoding NonCoding - 23:7837462-7841668 - TSS98935 3389 2 TCONS_00132161_8 90 0.325169666568309 3 0.194768133174792 6.11995677006067e-07 8.97644084168953e-05 5.42359199936645e-05 7.25863058386011e-05 7.8522605502168e-10 0.000352052019606861 6.44100314534326e-05 1.3059446571872e-05 0.000156193778138712 7.31532605799374e-11 3.73378201091109e-07 2.57576995527127e-05 4.28653974376293e-05 3.41093260103052e-06 0 0 0 0 0.000231494391928759 7.77741346250327e-11 9.63595109091434e-05 0 0 0 0.000154608467855354 2.62773086235835e-05 1.85103554851616e-07 0 0 0 XM_005199626.1 KIAA2018 PREDICTED: Bos taurus KIAA2018 ortholog (KIAA2018), transcript 2e-168 598 90.95 0.126881085866037 0 noncoding GGGTACACAATTCTGTGGGGTCGCTGGAGGAGCTGGGTTGAAGGGTACAGGAGAAATTGCAGTACTGGTTTTGTATCTCTTTATGAGCCAAACGATTTCAAATGAAGAAGTTATAATAATAACACAAGGACTTCCCTGCTCGTCCAGGGGTTGAGACTCCACCCTTCTGCTGTAGGGGGCGCAGATTTGATCTTTGGTTGGGAACTAAGCTCCCCGTTATGCTACATGGCGCAGCCAAAAAATTCAAAAAGCGAAAACAACAGACTTAGTAGCTTAAAACAACACCAGGCATTTACTCCTGATCCTGCGATTTGGGCGCTGCTGGAGAGGGACGGCTGATCTCTGCTCACCTGGGACTGGGGCCCCAGCTGGGATGCTGCACCAGCTGGGGTTGGCAGGCATCTGTCTCCCCACAAGGTCCTTCAGCAAGGCAGCTGCGCCTCGTTATGTGGTGGCTCCAGGCCCAAGAGGGTGAAAGCAGGAGTGACAAGGCCCCCAACGCCTCCGGCCAAAATTAGCCAGTGTCCCTCTGGCCACATTCCACTGGTCAAAGCTGACCCAGGGCCAACCCAGATTCAAGGAAGAAGAAATACCACTTGGATGCGTGTTTTCTGGGTCCAGCGTGGAATGGTCTTCCATGAGATGGAGGAAGTGGCAGAGAACCTGCGGCATCTTTAACTCACGGCCATCACTGATGTGATGGACAGGGAGGCCTGGCGTCCTGTGATTCATGGGGTCGCAGAGAGTCAGACACGACTGAGCGACTGATCTGATCTGATCACTGATGTATCAGAAGCTTCTGAATTTGCCCCAGGGTGTCTGGTCCAGCCTCCTCACTGGGGATGTGGGGATGGAGGCTGGAGAGCCGGCGGGGGTGGGGGGGTGGTCAGCCACGCAGAGGGGCGTGGGTTTAGGAGCAGAGCTGGACTGCTGACCCAGGGCTCACCCTACATCACCCCGGGGACGCCCCAGTCCCACACAGGGCAGCTTCGCCAGCCTGGCATCACCGCTTGGGATTCTGTTTTGCACGTGCTGGTGTTTGCAATCAAAAAGTTCAGCGGCCCTTCCAGTGTGCTTAAATTAGTCCCCATGAAAACCAAATCATTTCATTTGCAGAGAAGGGCTTAATTGCAAGGGGAACGAGGCAAAGGGAATTCTGTTGCCTGTTTTCATTGAAGAAAATTACTGTACTTTCCCCTGTCTTCTTTACTAAACAGAAGCAGCTTAGAAATTGGGCTGTAATCACCAGTGATACCTCTCCTACCCTTTCTGTTCAGAGCCTGCTCAGCATTCCCGGCTCCTGACACCCTGCTCTGGGCCATTCTTGCCCACCCACCTGGCAGGGCAGCCTGATCCCAAGTCCTGGTGCTGGGCAGCATCTCCCCGGTTTGGCTGGAGTCTCACCTCGCCCCTGCGATGTTGAGAGGATTGCCTGAGATGTTACTGGGGCCTCAGCCAGGGACTGGCCCACGCTCTTGGCAGGAAGAAACACCTCATCCCTTTCTTCAGAAAACACATGAAGTGGACTTCTCTGGTGGTCCAGTGGTTAAGATTCCATGTTTCCAATGCAGGAGATGTGAGTTCGATCCCTGGTCGGGGAATTAAGATCCCATACGCCACAGTGGGGGAAAAAGAAAAAAAAAGAAAACACATGAAATCTGCTCCAAGCCCCTACTCACCAGGGCTGCAGAGAAGTTCCATTTTGAACGAAGAGCATCCCCACTAGCATCTTATGCAAAGCCTAGGGCTGGTCATGTATGGATGTGAGAGTTGGACTGTAAAGAAAGCTGAGCGCCGAAGAATGGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCTGCTGGACTGCAAGGAGATCCAACTAGTCCATCCTAAAGAAAATCAGTCCTGAATATTCATCAGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTGATGTCAAGAACTGACTCATTTGAAAAGACCCTGATGCTGGGAAAAGATTGAAGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATAATTGCATGGCATCACCGACTCAATGGACATGAGTTTGAGTAAGCTCGGGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCATGGGGTCGCAAAGAGTCGGACACAATTGAGCAACTGAACTGAACTGAGGGCTGGTATGCTTTAGTGCCTGGCAGAAGGGATACGCTGATTAGCCCCAGTTGGTCCTGAGAAGGCTGGGTCTCCACCTCCACCCCCTGGAAACACAGCACCCGGCGGAATGCTGCCCCTCACTCACCAGCCCCTCCTTTTCAGAGGACCCTCTGTCCAGATCCTTTTCTCTCAAGCTTGCTCAGGGATGGGAGTGCAGAGCTGACCCGGCTGCCCAAGAGAGACTCTGGAAGGTGGCCTGGAGGTCCTGGGTGGATGTCCACAGGCGAGATTTGTGGGGCGCACCTCCCGCTTCCTCAGCCATCAAGCTTCTTTACTGGTGACCCCAAGCCCGAGAGGGCCGTTCGTCCCCGAGGAGGACAGGGCTGTGGCCTGGGGAGCCGGGGAAGGGACCAGCGGAAACTTCTCAACAGTGGGCCCCCCCCAAAGATGCCCTCAGACCCCTTCCTCACGCAAATCCCACTGCCTCGTGCTGTTCCTAGGGAAATGAGAGCTGCTGAAAGGGGGGGCTTGGCCCTTCAAAGCTGAGAAAGGCTGCAGAGCTGAGTGGAGCTGCCTGCAGGACTGAGGATGTTGCTTGCCCGCCTGGGGCCTTTGTGCCAGGTGCTCTCCACCATAAAGGAAGGGGCTGGGCGGCGGGAGCCTTTTGTTATTTCCTTTATTTTGATCTTGCTCCTGCTCTCCAAACAGCTTCACAGAAATAGAACCTGGCGTTAGCTCCCTTCTCAACTTAAGACAAAACACGGCAGCGGGGAAAATCTTGCGCTGAAAATCAGAAATGGGAAGATGGGTTTGTTTTTTCCAGGGTTGTGTTTCTGGGTCCTTGACTATCAATTTACCCACCATGTTTCCAGCTGATGGGAGGATGGCAGGATGGCGCTAACCTGCCAATCGCACCCATGTGGCCGGGCAGTGGAGTGGCCTTCATCCCAGGCTGACCCAGGAAGGCCCACCGCACATGGCGCTGACCCCCACTGCTAGCAGCTCACCCGCTGTGCCCCCAGGGTACAGGCAATGCTGGTAGAGAGCAGTAGGACCCTCAAAGCCCTCCCAGCAACCCTCTGACTCCACTGGAGGGACTCCCACACATCCCGAGCTGTGTTCTCCCCAGTGGCCAGCCCCGAAGAGACAAGTTTGCCATCAATGTCCACTTCCTGCTTCCCTAGGAGTCACCATCAGTGGCCAAGACACCCTGTCCAACTTCACCCGG TCONS_00133883 TCONS_00133883 r 5' 0 TCONS_00133883 TCONS_00133883 r 5' 0 EMBV3_15335 TTTCTGTCCCTTACCTTCTTGTCGTCAACTCCGGACCACCAAGTTCCGGTCCATTAAAGG Gene BVV0102_020198 + 0 NULL GK000014.2:537386-727105 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107391 TCONS_00052473 2 XLOC_063301 XLOC_031474 Coding TCONS_00052473 XLOC_031474 Coding Coding LOC781635 14:500369-621823 x TSS38923 449 1 TCONS_00052473_1 48 0.347438752783964 2 0.996319563946547 0 0 0 0 1.06562862574685e-123 0 0 0 0 0 0 4.43308949203747e-05 0 0 0 7.11560706297111e-05 0.00128313067439325 6.59267843417655e-16 8.47382280988799e-09 0 0 4.45913207723757e-05 6.08433182500354e-13 6.32802764997658e-43 0 0 8.87033788035871e-12 2.22970555734275e-10 2.06797021355392e-30 1.72224187499059e-86 XR_232406.1 LOC101909605 PREDICTED: Bos taurus uncharacterized LOC101909605 (LOC101909605), 1e-108 396 97.84 0.514476614699332 TCONS_00052473_1 sp|P61568|ENK13_HUMAN ENK13_HUMAN HERV-K_1p13.3 provirus ancestral Env polyprotein; 4e-07 45.1 43.59 0.791666666666667 0 noncoding GAGGGCACCTGAGGCCTCTGTGAACAGAGCAAGCCCTGTGTTGGGGGCTTTATTGGCTTTCTGCATAAGCCAAGGAATATCAGCCTCTTTCTGTCCCTTACCTTCTTATCGTCAACTCCGGACCACCAAGTTCCGGTCCATTAAAGGACCTCAACAAGTGGCACCCAGAACAGAGACTTGGTACACGTAGGCAGATTCTTGGACAGAGTGACCCCAGGGCCTATTGAGGCCGGTGGTCGAATGGACGGAGAGAGGACCAAACATTTCAACTAATGACTCTATACATATGCTTTCTCCCTAGTACATGAAAGGGCCTTCATACCCTGGGCAGGAAAGAAAACTAATTAATATTTCTTTAGGCTATGAAGTCCTTCCCTTGTGCACGGGCCCAGCAAAATTGTGCATAAACGTCAGCCGACAAATTTGGGCTGACAAATTTGGGCTTTCAN TCONS_00052462 TCONS_00052472 s 3' 15881 TCONS_00052462 TCONS_00052472 s 3' 15881 EMBV3_32387 ACCGGCAGGTAGACATGGATTCCGTGGAAGTACCTCTTCAAGACCAGAGTGGGGCCCATT Gene GeneID:100140687|LOC100140687:XM_002689548:28_cdna Constitutive 0 NULL GeneID:100140687 8 GENE LOC100140687 NULL hypothetical protein LOC100140687 EMBV3_42110 TTTGATGACGAAGATGATGAGCTCTCACAGGTATCTCATGGTCCATCAAAGAGACTGCTG Variant GeneID:508872|MGC139126:NM_001098000:94_cdna 188^290 1 EMBV3_16405 GeneID:508872 10 GENE MGC139126 MGC139126 hypothetical LOC508872 EMBV3_22379 TCGTGGCCTTATGGTTTGCATCAGAACTTCATGCATCAGGGAAATGCCAGATTCCAGCCC Gene GeneID:528986|ZCCHC11:XM_002686402:266_cdna UTR3_Alt 1 NULL GeneID:528986 3 GENE ZCCHC11 NULL zinc finger, CCHC domain containing 11 EMBV3_01129 CTTCTGGTATGTCCAGTACCCCAACCAAGGCCTCCAGTTTCTACTGAAGTATCTACCAGG Gene GeneID:100296830|LOC100296830:XM_002690614:5_cdna Constitutive 0 NULL GeneID:100296830 10 GENE LOC100296830 NULL hypothetical protein LOC100296830 EMBV3_38898 GCTTTGTGTTTTGCCCTGTCGTGTGGTCGTTACCTTTACAATACTTGGCTGCTCAGGTGC Gene BVT0102_149177 + 0 NULL GK000016.2:56648155-56660855 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06861 GGGTTCACAGATCCCACCTTGCTTACTCAACCAGCCCTCTTTGGTCCAGTTCAAAGGGAT Gene BVV0102_077472 + 0 NULL GK000010.2:77196982-77201410 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12805 CTCCCTTCAGAGAGAGCTCGGAACATTCACACAAGTGGGGTTTAAAGCTGCAGAGTCGGA Gene GeneID:618918|MLC1:NM_001076952:65_cdna Constitutive 0 NULL GeneID:618918 5 GENE MLC1 MGC139600 megalencephalic leukoencephalopathy with subcortical cysts 1 EMBV3_15170 CTACGGCCGCTGTGTGGTGGGGAGAGGCCGGCACAATACAACGGCATTGGGAATATATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02245 TGTGCTCCTATGTTCAAGCTTTCCCCACAGGGGACATCTTGGAGAAGGTCAGTGTCCATT Variant GeneID:513958|EIF2B2:NM_001015593:109_cdna 861^927 2 EMBV3_06725 GeneID:513958 10 GENE EIF2B2 NULL eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa EMBV3_03734 CATAATGTATATTTTTTCATGTCGTCGTGAGCGCAGCCCCTGTGTTCCTTGTGCAGCTCA Gene GeneID:509969|CLSTN3:NM_001075425:28_cdna Constitutive 0 NULL GeneID:509969 5 GENE CLSTN3 MGC140714 calsyntenin 3 EMBV3_35134 TGATGGGTAGAGTATTCGGTGTGGGGAGGGCAGGAGCTTAAGAAGCAGAAGGGAAACACA Gene GeneID:281299|MC2R:NM_174109:17_cdna UTR3_Alt 1 NULL GeneID:281299 24 GENE MC2R NULL melanocortin 2 receptor (adrenocorticotropic hormone) EMBV3_24115 TGTTCCGCTTCACAGGGCCGCTCTACTACGCCAACAAAGACTTCTTCCTACAGTCGCTGT Gene GeneID:100140312|SLC26A1:XM_002688445:2_cdna Constitutive 0 NULL GeneID:100140312 6 GENE SLC26A1 NULL solute carrier family 26 (sulfate transporter), member 1 EMBV3_40398 GCCCTTGCCAACATCACCTTCTTTGACACGATGGCCTGTGAGATGCTCCTGCAGCTGAAT Gene GeneID:784497|INSC:XM_002693044:319_cdna Constitutive 0 NULL GeneID:784497 15 GENE INSC NULL inscuteable homolog (Drosophila) EMBV3_33668 CAAAATGTATAGATTTGGGGTAAAAAGTTGTCTCAGTTCCTCTCCCATTTACAGTAAGGG Gene GeneID:504422|SEC24D:XM_002688058:5_cdna Constitutive 0 NULL GeneID:504422 6 GENE SEC24D NULL SEC24 family, member D (S. cerevisiae) EMBV3_00354 CACCATCATGACTTATCAACTCTGCGCCCGATTAGTGGTTTTCTGCTGGGCAGGTGGCTT Gene GeneID:526667|LOC526667:XM_002690671:250_cdna Constitutive 0 NULL GeneID:526667 10 GENE LOC526667 NULL similar to Olfr736 protein EMBV3_21667 ACCTGGCTTTGCAGCCTGGAGACCGGATCATGCTGGTGGATGACTCTAATGAAGACTGGT Gene GeneID:536456|STAC2:XM_002695927:309_cdna Constitutive 0 NULL GeneID:536456 19 GENE STAC2 NULL SH3 and cysteine rich domain 2 EMBV3_36800 AGGCATCAGACAGTTCATACTGGTGAGAAACCGTACAAATGTGATGAGTGTGGCAAGGCC Gene GeneID:616954|ZNF813:XM_002683968:2_cdna Constitutive 0 NULL GeneID:616954 Un GENE ZNF813 NULL zinc finger protein 813 EMBV3_01582 TCTGTTTCTCAGCTTCAACAATATATCTACGAAGAAGAAAGGCGTATGGCATCTGTTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20588 TGGGTGTGGAAGATTACACGACAACCCCAGCTGCCAGTAAAGAATCCTTGGCAACTCCGA Gene GeneID:509732|PDPN:NM_001033120:88_cdna Constitutive 0 NULL GeneID:509732 16 GENE PDPN NULL podoplanin EMBV3_04225 AGTCTAACGATGTTTCACAGATGATCCAAGAGCTTGTGAGGTTTGCTGCTCACTGGACAG Gene BVV0101_058181 + 0 NULL GK000002.2:4565804-4608386 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101503 TCONS_00101502 TCONS_00101504 TCONS_00101507 TCONS_00101505 TCONS_00101508 1 XLOC_061696 Coding TCONS_00101503 XLOC_061696 NonCoding Coding POLR2D 2:4554256-4569544 j TSS75847 4448 1 TCONS_00101503_13 125 0.162320143884892 3 0.709230064760908 0.000942935715271759 0.00104160903042786 0.00113403541592997 0.000171500924042992 0.000297780261945182 3.26753523317043e-17 0.000922473782914983 0.000143696281856919 3.83547407299416e-07 0.000420362306302283 0.000290666190023804 3.23130480295282e-05 5.44906835791718e-05 0.000799059361741852 1.5679272026971e-08 0.00112781578250684 0.000211883822695058 1.6785565840248e-08 0.00163576853513927 0.000568039182086554 7.75700088323272e-05 0.000181591702380058 0.000107800140312711 2.99097394964148e-10 0.00018842152631499 0.000776648526648591 0.000618583175733722 0.000214191372620925 7.35879011797177e-12 0.000224008548780406 NM_001076458.2 POLR2D Bos taurus polymerase (RNA) II (DNA directed) polypeptide D (POLR2D), mRNA. 0.0 967 100.00 0.120278776978417 NM_004805.3 POLR2D Homo sapiens polymerase (RNA) II (DNA directed) polypeptide D (POLR2D), mRNA. 7e-118 430 76.62 0.139613309352518 0 noncoding 0 0 1 1 -1.9527335505936 0.0359960552220471 0.0219011158119635 0.859020832107742 GTGGGGCCCCGCCCCGTCTCCAAGAACACGCCCCTTCCGTGGCGGCGGCCGGAAAGAGCTTCCGTTTCCGACATCGTGAGTACTGGTTCTCGGCGAGAGGATGGCGGCGGGAGGTAGCGATCCGCGCTCTGGAGATGTAGAGGAGGACGCGTCACAACTCATCTTTCCCAAAGCTTGCTGCTCCAGAAGAAGCTTCATAAGTTTGAGTTGGCCTGTTTAGCCAACCTTTGTCCAGAGACTGCTGAGGAGTCCAAGGCTCTGATCCCAAGCCTGGAGGGGCGGTTTGAAGATGAGGAGCTACAGCAGATTCTTGATGACATCCAGACCAAGCGTAGCTTTCAGTATTAATCTCCAGATATCACTGCTGCTGGGGACCCATGTCACATCCCCAGCACAGCGCCGCTGGCTCAGTCTAGGGCTGACTCACACAGAAATTCTGCTGCAGAAGACACTTGGCCTTCCTTTGGATAGAACAACCCAGTGCTTCGTCTTGGTTTAGGTTGCTATTTCAAGCTTGACTGTTGGCCAGTGGTGACCTGAACAACCCTGGAGAGGTCTTGCAGTAGCTGCTCATGGCTGCCTGAGCTTGCCTCTGGGAAGGACGAGGTGGGGTGATGTGCATACAAGCCGCACTACCGACTGCCTCATATCATGGTCTTTGGCCCTTGTGTCATTTTGATTCCTAACACTTCATGTTTTAATATCAATGTGTTCGTAGTTTTTTAAGCTCTTCTAGAACATGTAAAACTAGTATGGGAAACAGTCTTACCTAAATGCAAAAGGAAGAATTAAAGCAGACCTATATCACTGTTTGAAATTCTTAAAGAGAAGACGTAGAGCCTTGGCATCATTGTGCTTAGCCCAGGAGACAGGAAAGGGGTTTCTGAGAAAAGCAGCTCCTCTGTCATCCTGAGGGTAACCACTGGGTGTTGTGGAGCACACAGCCTTGTGATGGACAAGCACCATACCTTTTTCTTGGATTCTTGTGGAACGTATATGTGGAGTATGTGTTCTTAAAGCACTTACTTCGTCACTCCCAAATTCAGACTTTTCCCTACCAGGCCGGATGTGAAGCAGGGAGCACTTTGCAGTCTCCTCACGTGGGGCGTCAGGTCCAGACGTCTGGCCGCCTGCTCAGCAGCAGGCGTTCTGTGGGGATTTGCAAGGAGGGAGCCTGCCACTTGCTGAGCCACTAGAGTGATATCACTCGATCTGAGACTAGTTGCACGGAAAATACTTTAATAGCTAAATATTGTGGCTCTCAATTTTCAGAGGGGAAATACACCTGTTTTCTTCACAGTTTGGGGATTTTTCTTTGAAGTACTTGTTGACGCCACCTGAATTCATGATCCAAAAACAAGGATGGGGAAAGAACAAAGTTGGCTTTAGAAAGTCAAGGCCATTTTATGTCAGCTTCCAAGGCAAAAATCAAATTTTCTTATTTTTATAAATTATTTTCAATTTCTGAAATGACATGGTTTTTAAGTCACCATTATTTGAAGGAAATGTCAGTTATACCTCAATTAAAGGAATATTTGAGGAAGTACTCTTCATCATTGGCAACTTCTTTGAGACTCATCAGCATTCTCAATTGTAAAATGTGGATAATAATAGATACTGAAAGTTGAATGAGAAAATTATTAATAATTTAGAGCCTGTTGGTATCTGACATACACTATACCCCAGTACATGTTAGCTGTCATTAGCTTGCTTCATAGAAGTTGGTGCAAGGATTTGGTAGCCTACCCACTGGCACCAGTATCAGACTGAAGACAATGCAAACTGACTACTTTTTGAAGCCTGTAGACTTGGTTTGTAAAAGAGGCGGTTACATGCTTGGCACCAAGCAATGGAACAGAAAACAGACCAAGATACCAGCTTGAATCCAGGCACGTGCACTGTGGGGCAGGAGCAGGGCCCTACCACCGTCGCCACGGTGTTCCCACCTAATACTCGGGTGAGCCACCAGAGAATTTTACACTGTGTAAAGCTCCTAGCATATAGTTAGGCACTAATGAATGGCAGGCAGTAAGGCACCTCGAAGCAGATGTAAAAACTAACTCACATTGGGATGATGGGTAAAAGCAGCCTTGTGCTGTGTTACAGATGCACAGGCTGGTCTGTGCCTTCTGCACTGGTTCTCTCCAGTCCTGGACAGCTGCTTGCTGTCCAGTGAGCAGCAAACCTCACAAGCTCTTGGATCATCTGTGAAACATCGTTAGACTTATACTGTTTGCAAAAGCAGAATTCAGACACATTGAAATAAAGCTGTCATGTCAAAGCCTCACCTCACCGGAAAGCTAAATGAACCTGAAAAGCTTTTCTGGAAAGTTCTAGTCATTTTGCTTTTATAAAAATTTATTAAACTTGAGTCTTGAAAAACAGCATTACTGAGTGAGGCCTAAGCACAAGCTGCATAAAATGACTATTTTATGCTTATAAAATAAAAATGACTATTTTATGCTTATCTCTCAAACCCATACATTGAAGCCCACACACAGACTTGAGTATGAATAATTACAGCGTTATTCATAATAGCCCCAAACAGGAAACAGTGAATGTCCACCAGCAGGTGGGTCAATCAGCAAGATCTAATCTAGCCACGGAGTAGAATACCATTTAGCAATAAAAAGGTGAACTAAAGAAATACCTGGACCATTGAAACAGGGTATGTCGGTTGTGTGACATTCTTTCAGCTTTTTTTTAACTCTAAGCCCAGAAGAGCTAAAAGGCTAGTGCATTGATCACACCTGTATGTTCATCACCTGCATTTAACACATTTGTCATACTTTATTATATTTTTCCAGGAAGCATTTTAAAGCAACATGAGACTTCATTAAAAATTCAAGCATGCATTTTAAAAATACACTCCTCTGTAAGTTTGCCTATTGCACTTGTAAGAACACCAAGAATTTCCTGGTACTTAGTTCAGAATCTCCTGGGGAAAGTTCTGGGCCAAAGGTCAGTCCCAGTGCTGGTACAATTCAGTATATAAAATCAATTGTTATTAAATATCTAAACACTGTGAGAAATATCGAAGAAACATCGGGCTACTGCCCTCAAGTTGTTGGATGAAACTACCCCTGGGTGAAAAAAATGGGCCTAAACAGAGTGCAGGCCCTTAACAGTGATATATCTGCATGTGGCTCTCCTGTCTCAGCATCGCAGGAGGACAGTCTGGGACTGACGGGTGGCATGTTTGGTGACAGCAGGCTGAAGGCACTTCTATCTGCTGCAGTCTTGCAGTTCTGTGTGCCTCACTCCTTTTGCACGACGCTGAGGGAGTGCTTGATGGGCTTCCCTGTGGCTCAGATGTTAAAAAGAATCCACCTGCAATGCGGGAGACTGGGTTGGGAAGATCTCCTGGAGAAGGGAACAGCTCCCCACTCCAGTATTCTTGCCTGGACGGAGGAACCTGGTGGCTCCAGTCCATGCGGTCACAGCAGGACACGACCGAGCGACTTTGACAAATGACAAGGGGGTGCTTAAGTAGTAAGTGTTGAGTAAATACATCGTCCCTGTTTTTTTGTAAATACACTGCCCCTGTTTTCAGCAGTGAGGAGTGCAGGGAGAGCAAGAATATACTTGAAATAATACAGTTGGAAGCGAGGGCTTGGTGAGACATGGTGGAGGAGAAGCAGCAGCCCAGGAGACACCTGAGAATTGTGGAAGACAGGGCAGCTCTGTCCAGCGGAACAGATAGGACTGTTCTGTGTCTGCTCCGTCCGGTGTGGGGGCTGCCTGCTACTCGTAGTCCTTGAGCACTTGAGGCGAGTGTCCCTCGAGGAACTGCACTGTAAATGTCTTAAATTTAAAAATGTAACTAGTCACAGAATCTCCCCAGTGGTCCAGTAGCTATGACACTCAGAATGCAGTGGGCCTGGGGGTGATCCCTGGTCAAGGAACTGGATCCCACGTGCTGCAGCTAAGGTCCAGCGCAGCAAAAAGTTTTTTTTTTTTTTTTAATTTGTAGTCACATGTAGCCAGTGGACAGCACAGCTCTTAGCTCCCAACACAAATGTCCTGCAAAGCATTGACAGCATTTCAGCAAGATTGACAGTGCTCACATGAGCAGTAGTAGTAATGGCGGGCCATTCATCCGAATTGCATCTCCAGAGTTTTGAAGGCTAAATGTGTATATCACTCTCTGTGCATCACTGAGTCCAGCTTTTGTGTATGGTACAAATTCTGGTTTTTAAAACCTGTCTCTTTACTACTAATGCTCATGGACAAAATTATAAAGGCTGTTTTAAGGTAACATTTGGAAATAGTGAAAAGTTGAATACTTCATCTTGTGTTGAAAACCTCTTTCCTAATTCTGCATTTTAAGTAGGCTGAAAACTTGTATGTTGAATTTAAAAAGCAAAACTCCCAAGATTTATTACCTTTAAAGGCTTCTGATATTTATATTTAATAATTCTACTAATAAATGTGGTTCAGGCACTGGA EMBV3_38848 CAGGGAGAAGTGATTGCTGGGAACTTAATGCCTGCAGTGCCCTGGAGCCCTTCGAAAAAT Variant GeneID:617456|HJURP:XM_002686557:44_cdna 736^822 2 EMBV3_36577 GeneID:617456 3 GENE HJURP NULL Holliday junction recognition protein EMBV3_02764 GGGCTACTAGGCCAAAGAAGTCAATAAATGATAATGTAAGTGAGTGCTCACCAAGTAAAT Gene BVV0102_300120 + 0 NULL GK000030.2:117876459-117926586 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07203 GCAGCTTATTTTACCTGAAACTGTTAAGCCGACCAAGATCCCTCCCTGCAAGACAGATGG Gene GeneID:530659|LEMD3:XM_002687649:828_cdna UTR3_Alt 3 NULL GeneID:530659 5 GENE LEMD3 NULL LEM domain containing 3 EMBV3_07093 TAAGAGTTTTAAAGCCACTTGGACTGAGGTGGTGCACATTAACCGGGAGAGATGGAGGGC Gene GeneID:526211|PDE1C:XM_002686835:31_cdna Constitutive 0 NULL GeneID:526211 4 GENE PDE1C NULL phosphodiesterase 1C, calmodulin-dependent 70kDa EMBV3_35004 CAGTGCTCTACCGATTGATGCTGCTTCAGTATCAGGGAAAACATCTCCGATCTGTACACA Gene GeneID:100295835|LRRC70:XM_002696306:24_cdna Constitutive 0 NULL GeneID:100295835 20 GENE LRRC70 NULL leucine rich repeat containing 70 EMBV3_21932 TCACATGCACTCAACCAAAGGGAGGAAGAAAGCTTATTCGACCTGCAGCACCCACCTTAC Gene GeneID:788055|LOC788055:XM_002689115:69_cdna Constitutive 0 NULL GeneID:788055 7 GENE LOC788055 NULL similar to Olfactory receptor 2L2 (HTPCRH07) EMBV3_26035 GCAGCCTCTTCTCCAAAATCAAGAGCTGGGAGTTTAACGAAGTTGCCTCCATGTCTGAGC Gene GeneID:613597|FBXO40:XM_002684806:182_cdna Constitutive 0 NULL GeneID:613597 1 GENE FBXO40 NULL F-box protein 40 EMBV3_33360 ATCTTTTTGCTTCTTACCAAGGCCCCAAGATGCAGGGAGTGAAACCCCTGGAAATGTGCC Gene GeneID:533046|SLC7A14:NM_001077992:28_cdna Constitutive 0 NULL GeneID:533046 1 GENE SLC7A14 MGC152122 solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 EMBV3_00273 CAGGGTCTCTCTCTACCTGTGCACTTAAGAGTAACTGAAGATCAAACTAAGCCTACAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05813 GGTCTCTGTGAGTCTTTGCACCTGCTTTCAGTGTTATTGTGAAAGGTGTAGTTTCTGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32465 GCGAAGCAGCGCCCCGGTGGGGCCCAGGAGGAGCAGCACTATGGATTCCTTCAAGGTGGT Variant GeneID:533851|PDLIM7:NM_001017947:37_cdna 66^239 2 EMBV3_41082 GeneID:533851 7 GENE PDLIM7 NULL PDZ and LIM domain 7 (enigma) EMBV3_12292 CTAGTGGGTGGGGAAGGGCCTGGGGGACAGCTCCTTTGCTTCTGATCTTCACTGGGGAGA Gene GeneID:515424|CPNE7:XM_002694766:542_cdna Constitutive 1 NULL GeneID:515424 18 GENE CPNE7 NULL copine VII EMBV3_26482 TGGAGCCAGTAGTGCTTCAGCAAGTGGTTCTTCAGTGACCATTCCACAGAGGATTCACCA Gene GeneID:541306|AFF4:XM_002689151:155_cdna Constitutive 1 NULL GeneID:541306 7 GENE AFF4 NULL AF4/FMR2 family, member 4 EMBV3_30813 AACTTCAAAAGAGCTAACCCCCTTCCCACACCCCAGCGACCCACATTCCCTCTGTGAAAT Gene GeneID:785603|TBKBP1:XM_002695919:286_cdna Constitutive 1 NULL GeneID:785603 19 GENE TBKBP1 NULL TBK1 binding protein 1 EMBV3_23261 CCACGAGCCTGATCCTGGTTCTTCAGACATCTCCACGTCTACTAAGTCAGGTTCTAATGC Gene GeneID:539366|LRFN5:NM_001081610:29_cdna Constitutive 0 NULL GeneID:539366 21 GENE LRFN5 MGC148598 leucine rich repeat and fibronectin type III domain containing 5 EMBV3_02063 AGGTTGCCAGCTTGCTTGTGAAAAGGACCCCTCGAAGTGTTAGCTATAGACCGGACTTTG Gene GeneID:510369|LOC510369:XM_002686440:435_cdna Constitutive 0 NULL GeneID:510369 3 GENE LOC510369 NULL similar to hypoxanthine phosphoribosyltransferase 1 EMBV3_30306 ACGAGCAGCGGTTTCAGCTGGGCCTGATGGACGACGCCGCAGAGTGCTTTGAAAATATAT Gene GeneID:100336459|LOC100336459:XM_002688062:16_cdna Constitutive 0 NULL GeneID:100336459 6 GENE LOC100336459 NULL hypothetical protein LOC100336459 EMBV3_02515 CCGTCATGTCCAAACATTCCTTCCTGCTTTTCATCAATTCTTACTCTACAGTCTCGCTGC Gene BVT0102_002898 + 0 NULL GK000015.2:40719287-40748260 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059081 1 XLOC_036258 NonCoding TCONS_00059081 XLOC_036258 NonCoding NonCoding PARVA 15:40718714-40720939 o TSS44385 2225 4 TCONS_00059081_4 66 0.070561797752809 1 0 2.38708392168212e-05 7.04126066517857e-05 9.68455579147201e-05 1.35910661391144e-11 5.71673193061284e-06 2.3264881964882e-12 4.67522056938177e-05 5.05076615484759e-05 6.02841222265325e-05 0.000287520319469357 3.05636237235149e-05 2.28282620110396e-05 8.22224366139112e-06 6.51730505132969e-05 0 0.00465774892753831 0.00130937582282257 0.00743537493294489 0.000151463756786495 0.000331290941917447 0 0.000904669843634914 0.000592449007311243 0.00269500209682195 0.000261660749928905 0.000249428338482408 0.000399286073904189 0.000139587922273586 0.000212414455468637 0.000282083491971236 NM_001099144.1 PARVA Bos taurus parvin, alpha (PARVA), mRNA. 0.0 1027 100.00 0.255280898876404 NM_018222.4 PARVA Homo sapiens parvin, alpha (PARVA), mRNA. 0.0 1274 78.34 0.715955056179775 0 noncoding 0 0 0 0 0.126692775805731 0.548079773209051 -0.0730002266591759 0.451189926359064 TGCAGACATCGTCAACTGTGACCTGAAATCTACCCTGCGAGTGTTATACAACCTCTTCACCAAGTACCGGAACGTGGAGTGAGGGTCAGACTGGACCATCCCCGGAAGCGCCTTATCCTGCTTACTCCTGTCTCCTGCTCTGTGCTCTCCTCCAAGTCCAGCTGCTCTTTTCTCAGAGATAGTGGGAACTGAGATCAGGAAGGAAATGACCTCAATGGGCTGACCTGACCTCCTAGGCTCTGAGGCTGACCCATCCTGGTACCAGGTCCAGATTTCCTTCTGTGTAATCTGGAACCAGCTTAGGCACCACAGCCCATCCACCCACCTACCCACCCTCACAAGATGAAAACAAAGATAAGAGTTACCATTTAATGGGTGTAACCTATGGGCTGGGCACCACGCTAAGTGCTCTGACCTACTCCAACTCGTGAATACTCATGACTCCCACTGAAGAAGATGTTATCAGCCCCTTTTACAGATAAGGAAACTGAGGCTCAGAGAGGTTACGTGACTTGGCAGAAGCTGCCATTTGTTTTGCTTCTTTGAAGAACATGTTCGTTAATACTAGCCCATTATGTTACATTCTCTGTACATCCTGTACTTGCGTTTGCATGTGCACCTGCGCCCTCCAAGAAGATAGGACCCCTGATCTCAGCACAAGGCAGGCTAGGTCAGGACTCAGTGGTTCACACTGAAATTGGCAAATCAAATTTAGCCCAATTAATAGTGTGTGTGTGGCAGGAGCCGTATCCCTCAACTCCTTTGTACAAATGAAAATTACTCTTAATTCCTTCAGATTTGTAATAACCCCTTATTCTAGTTTCAGGGTGACATTTGGAAAGGATTCTGTTTGAAATTAATGGAGTGGCACATTTTGCAGCCTTTTTGCCTGATTGCATGTAATGGAAGTGCCCTATATTTTCCTACAAAATAAGTCCTTGATTCATTATCGTTAGGCAAATGTACAATATACCCAGGCACCGCAGAGAGCTGGGCACAGGCCCATGCGAGCAGGGCTTGGGAAGCAGGGCTCTTCAACAGGGACTCTTGAGCTTTAAAGAAAGGAACTCCTTTTTGCCCTCTAATTGATCATTTAGACCATTTCTGGCGAAGTCTACCCACATGCAATTACTGGCTAATTCAGGCAAGCAAAAATGCAAGTTATTTAGACCCAATCTGAGTAGGTTTCCTTGCGTGGGTTACCCGCGGGCTTGTGGTTACATGGATCCCCTCTACATGAACCGAAGTTTGGAATACAGGGCTCAAGTTGTCTTAGCCTGAAGGGCCTGGGATAGGAAAGGGGCTGAAGCGGGGTGATTAGGAGGACAAGAAGCGTGGGGCAGATACTTGCACACTTAGCATACAGGGGGACATCCTCAGACCGAGGGATGTGGCTTGTGGTATTTCACATTTGTACTCTACGTTGACCAAAGCCTTGGGATAGGTAGTAACTTGTACTGATAGATCTTCATTATAGAATTTACTGAAGTATGCTAGGTGGACACTTGCCCGTATTCCCACCTCTGGATGTCTGTGCCTACTTTCGTACTACTTGAGGCCCAGTTGCACAAAGCCCCTCTCTGATTTGAGGAATTCATCGTGATCTCTATCTACACCACCCAGAGGGAGGCCTTCCGTCATGTCCAAACATTCCTTCCTGCTTTTCATCAATTCTTACTCTACAGTCTCGCTGCAGTTGCTCAAAACCCATATAATTTCAATATACTACTTATTTCTGGAGAGATTTCACTCGAAAAGTATTATTCAGCATTTAAGATACAAAGAAAATGTACTCTCTTGTGTCGATCTGTGTAAAAGAATACAATCCTTTTTTACATAATTAGTGAAATAATTCATTTGTCATTAAGAAACACTAAATACAGTACTATCTCAGTTTGCTCTTTTTTAAATTCCTGATAGCGATTCAGCATAAATAATTGCTTTGTCTCCTTGAGCAATACTAAAGCAGATGAAATAAGAGAAATGAACTCATTTAAATGTGCTTTGCTATATGAATTTTGTCTCCATGTTGTGCTTTTTTCTTATATTCAAGCTGCAAATGGACAGTGGACAAGTGACTTATGAAGAGCACTCCTTTTTATATTTTACATATGTACTATATGAAAACACATCAGAACACTTGGAAATTCTTTTAATAGCAGGTCCAATCTGTCAGAAAATGGTGTTTTGAGACCAAGGTCTTTACCTTACTCTGAAATTCCAGG TCONS_00059082 s 5' 0 TCONS_00059082 s 5' 0 EMBV3_39050 CTGTACAGACTGACAGGAACCTGAGAGAACAGTACTGTGATGGACCAAAAGAGATGAGTG Gene BVT0102_359514 + 0 NULL GK000023.2:30269256-30278928 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134810 TCONS_00134814 TCONS_00134813 TCONS_00134809 TCONS_00134811 TCONS_00134815 1 XLOC_081544 Coding TCONS_00134814 XLOC_081544 Coding Coding ZNF192 23:30264927-30294463 j TSS100421 9669 1 TCONS_00134814_6 578 0.145516599441514 10 0.67296427966819 3.93046984039303e-121 2.39930145705165e-17 2.15294780350105e-05 1.05263068617957e-41 1.66954847194323e-98 9.38771784852885e-65 6.59561730987173e-64 1.12297772317788e-105 3.30140755029021e-53 0.000378704851677647 5.58989151339645e-05 6.29845285852328e-05 7.93479622953239e-27 0.000188000522692188 0.000139120903907352 0.000598827440062567 0.000357296258816823 0.000507306727162743 1.31511150463872e-45 5.04466362572941e-77 1.37694472927381e-67 7.86312114560118e-05 3.69698573529313e-09 0.000237788961214207 3.93889029407397e-15 4.87029992972096e-82 4.12440260938622e-05 0.000120075479805528 1.12782577646488e-10 9.87059302572888e-05 NM_001100344.1 ZNF192 Bos taurus zinc finger protein 192 (ZNF192), mRNA. 0.0 3467 99.90 0.199193298169407 NM_006298.3 ZKSCAN8 Homo sapiens zinc finger with KRAB and SCAN domains 8 (ZKSCAN8), 0.0 4410 79.78 0.503464680939084 TCONS_00134814_6 sp|Q15776|ZKSC8_HUMAN ZN192_HUMAN Zinc finger protein 192; 0.0 1095 92.91 0.998269896193772 10 coding 0 0 0 0 -0.0258693816098509 0.894855894862987 -0.0132744466647851 0.797065156947642 CCTCCAGGATTCCTAGAGAGCTCCCGGAAGTGGCTTGGGGCAACATGCATGTTGGCCGGCGGTGTGCCTCTTCACGTCTGGAAGTTAGGGGCTGGAGGGTCCTGGGCCGGCTGCTGCTTTCGCACCTCTCTTCTTGCAGCCGTTCCTGTGGGTCTGTCCACCGTTTGTAGCATCCTTCCCCACCGCGGGCCGCCCCTGGAACTCACGGAGAGAAAGCAGAAGGAATTCCCAGATGGAATTGGCATGGCAGAAGGCTAAGAAGGCAAGGAGTTATTTCTGGAGAGGATCACTTAAATGACATCCATGTCATGAAGTACCCTTAAAGAAGAGGCCCTCAGAAGGTTCTTCTCTTAAGAAGATAAAGAAACATAGTAGAAACGAGTCTCCTGAGCTTTTCTGGCCCTAAATGGCAGCAGAATCAAGAAAGTCTTTAGCCCCATCCCCACCAGACCAGGTTCCTGAAGAGGACCTTGTAATTGTCAAGGTAGAGGAAGATCATGGTTGGGACCAGGAATCAAGTCTACATGAAAATAACCCTCCTGGCCAAGAGCTGTTCCGCCTACGCTTCAGGAAGTTATGCTACCAAGAGACACTAGGACCCCGAGAAGCTCTGATCCAACTCCGCGCACTTTGCCATCAGTGGCTGAGGCCAGATTTGAACACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTAGAGCAGTTCTTGACTATCCTGCCTGAGGAGCTCCAGACTCTGGTGAAGGAACATCAGCTAGAGAATGGAGAGGAAGTGGTGACCCTACTGGAGGATTTGGAAAGGCAAATTGATATATTGGGACGGCCGGTCCCAGCTCGTCCACATGGACATAGGGTACTCTGGGAGGAGTTGATGCATTCAGAATCTGCACCGGAGCCTCCAGATACTCAGCTCCAACCTGTGGCAATGCAGCACAAATCTGCAGTTCTCCAAGGGCCACATGATAGAGCCATATCAGTTTCACAGAGTCCTACCCCTTCCCAGAAAGGAAGTCCTCGAGACCAGGAGATGACAGCTACACTGCTTACAGCAGGGTTCCAGACTTTAGAGAAGATTGAAGACATGGCTGTGTCCCTAATTCGAGAAGAATGGCTTCTTGATTCATCCCAGAAAGATCCGAGTAGAGATAACAGGCCAGAGAATTATAGAAACATGTTCTCCCTGGGTGGTGAGACCAGGAATGAGAACAGGGAATTAACTTCAAAACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCGGGGGTCTTGAGCCTGGAGAAGCCCGAGACCTTCTGGGCTCATTAGAGAGGCAGCGGGGAAATCCCACCCAAGAGAGACGACATAAATGTGATGAATGTGGGAAGAGCTTTGCTCAGAGTTCAGGCCTTGTTCGTCACTGGAGAATCCACACTGGGGAGAAACCCTATCAGTGTAATGTATGTGGTAAAGCCTTCAGTTACAGGTCAGCCCTTCTTTCCCACCAGGATATCCACAACAAAGTAAAACGCTACCACTGTAAGGAGTGTGGTAAAGCCTTCAGTCAAAACACAGGCCTGATCCTGCACCAGAGAATCCATACTGGGGAGAAGCCATATCAGTGCAATCAGTGTGGGAAAGCTTTCAGTCAGAGTGCAGGCCTTATTCTGCACCAGAGAATCCACAGTGGGGAGAGACCCTATGAATGTAATGAGTGTGGGAAAGCTTTCAGTCATAGCTCACACCTCATTGGACATCAGAGAATCCACACTGGGGAGAAGCCCTATGAGTGTGATGAGTGTGGGAAAACTTTCAGGAGGAGCTCACATCTTATTGGCCATCAGAGAAGCCACACTGGGGAGAAACCCTACAAATGCAATGAGTGTGGGAGGGCCTTCAGTCAAAAGTCAGGCCTTATTGAACATCAGAGAATCCACACTGGAGAAAGACCCTATAAATGTAAAGAATGTGGGAAAGCTTTCAATGGGAACACTGGCCTCATTCAGCATCTGAGAATTCACACAGGGGAGAAACCCTATCAATGTAATGAGTGTGGGAAAGCCTTTATTCAGAGGTCAAGTCTTATTCGACATCAAAGAATCCACAGTGGAGAAAAATCTGAATCCACAGGAGTTTAGGGAAAAACTTGAGTCATAGATTGGGCGTTAATTCAACATTAGAGGAACCGTGTGCTGGTGAGAGGTCTTTCACTGTAAAAAAAAAAAAAATGGCAGAAAGTTCAACATATTACAACCTTATCTAGGGTCCGATTGATAGGGGTGGCAAAGTTAGAATAGCTCTTCAGTAGTTTGGGTCCAGTGCCTTGATACAAATTAATTAGCTTGACTATCTTAGGAGGTGTCTGATAGAATGGAGCTCCTGATGGTCTGATCCTTTAGAAGCTTAAAATAGCATTAGAGAAAACTGCTTGTGTGGCTTGAGGCACTTAACTTTGTCTTTTGGTGAGTAGCTGTAGGTTTGAGAGTAGCTACTCCTAGTTCCTCTGCTTCTTCCGATCTCCTGTGATCCCTGTCTCCCATTTATTCCCCTAAAGGTGCATTTTGTGCTCCTAATCTGATCTAAGAAGCTGTTTTAGAGTTTGAAGCAGCCTCTGTATGAGACTTACACTTATATTTAACTTTCTGAGCTCCTAGTTCTAGGGAAATTTTTATAAACACTTAATGTATTTATGCTTAAGTGTACATTTTATTTTATTCTAATGCTCCTGATAGTGGAAATCCATATTCCCATGCAAACTCAGAATGCTATATTTTTAACAGCACTCCAGCATTTTCCTTCATATATCACCTTCACTGACTCCCCTGAGTCCCTGAGCATCCATACGTATCCTTCACCACCCCCAGCCCCAGTACCTGTGTCAGCAAAGGAAGTGGACGCATTAGTGATGGTTGTGGGAATGATGCAGAGAAAGAGGTGAGTGGAGACTCAGCAGCAGCAGCTCAGCTGCTCTTGAGCTTGGATGGCTATACCTTTTGGTAATTTGACTCTCCTTTCCACCTTCCCACTGTACACTGTGGTACAAATAGGTATTTATACTATCCTCAATAAGACATCACATGGGGGAAAAAGACAGGTGCTTGAAGAAGTCTTAAAAATCCTGCAAAGAATGTACACTCATCTCTTTTGGTCCATCACAGTACTGTTCTCTCAGGTTCCTGTCAGTCTGTACAGACCCCCTGACTGGATGGTCTGCCACTCTTGCTTGACCTTGAACCCACCTCCTTAGATGGCCTCAGCACCTCACTCACTCTTTATCTGTTTCTTGCCGTTAGCTTTACATATCTTCAGTGTTCATTGGTTGAGTATCTCACCTAACAATTCCTCTTTCTTCTGAATTCTGGTACATTCCCTCTATAATCCAGCAAAGACACAATATTAAACTCATCATCACCAGGCACTATATTTCATATTTGAAGCTTTCAGTATACCAAGGGATACTGTATAAAGTAATGAGGCTGGTTTAAAATTACCACCAATAACTTACAGAAGAATCCAAATTTGGGTTGTCTTTTTAAATTGGGCAGTTCTAGCTATTCTAGTAGTACTGTTATTCCCAGTACTACCATTCCTCTAGATATTTGGAACACACTCAAGATTCCCATTTAATACACCATTCAAGAAAAACACTCTGTTACTCTTCGAATTTCATCTCATCTCTGACCATCTGGTTATGCACTTATTCACCGTATTTGGAATTGAGTAACTTTTAGCTATTTCCAAAATCATCTTTCAGAATGGGAATTTATTCCATTAATCTTATTCAGAAGAATATGAAATGAAATGAAAGTAATTTCATACTTGTAATGAAAGTTCCAAGAGAAATTATACATTTTCACACTGTGACTATCCTGAACAAGGACTGCACTTACTAATAATGTTTTATGATTGATGTTTGTAAAAGTCAGTCATAAAATAATACATCATAGAGGTCTGCCTTTTGGATCATAAATTCCTTCTCTGTAACATCCCTTCTGTACCCCACTATGGCACATATTGATTACTAATCACATCAGAGTTATCTACACCTATTTCATTGAACCATTGATATCCACTTGTCATTTGTCATCCTGGTTTCTTTGGTTAACTTTTTCAAAACAATGCTTTTCTTATCTTTTATTTTCTTCTCTTCTCTTTTCCCTCTGCTTCTCCCTCTTTTTAGCCTATAGATTACTATTCCTAACTCCTTTGTACTTGAAATTACAAGAAACCAGAAACAAATCTAGTTGTCTCTAGATCTTTGCTCTCTGCTTCAGTTGTGCCTTACTTTCCGTAAAATACTAATTCTGCCTGAGGCCAATGTTACCTGTGTATAAATATTATACAAGATGGGTACGTTGTCAGAGGGAGAGTGTGTGTATGCATGTGCATGTATGCACACAGTCCTCGCAAATAGTTCAGAGGAACAGTAGTCTTCCAGTGAAAGCTGTTAGCAGAGCACCGTGGTATTGAAATGACTGTAGATGTACCAGCTAACATCACTTTACATTACTCAAAGTAATGTAATTACTCAAAGTAAAGTAAAGCCAGATTACTTAACTCTTAGAATTACTGAGCATCTGGCAGAAATTTAGAGAAAAGAAAATATGACCAGAAAGATGAGTATTATACTGGAATGCATGTGAGAAAAGACTATGACTTGACAGAACAATATATGTCAAGGCTGATTCAGCACACCTATAGATGTAGCCAAATAGTTTAAGACAGCAGAAAAGGGCTGTTGTTTCTTTGTGGGCATAAGTAGAAGTCCTTTCTTGGTCTACAGTTTTCACTCTTAGCATTGATCCGTCTGTATGACCTTACTTTGAGCTCCTAACTATGAGTGACAGCACTAAATTCCTTTATCCTGCAGATTCTATTTTTATACTTGTAATCTGAAATTAACTGTTCACCAGTACTTTCTTCTCCCATCCTCAACTTTTTAAGACCTGGCATAATAAAGTGGTTCTTCTGTAACAGTTGCCATCCAACATGGTCCTAGGAGAGACATCTTAGGTTTCAAAGACTTTTTGCATTGAGTAAGGTGGTCGTGGTTGATTACCATATAGAACAGTTAGTTTTATTCTTGGTTCTGAGGGTCTAGCTATTGCTTTTATTTATTGAGCACTTACTGTGTGCCAAACCCTAAGTTATGTATTTCTCGTGCTTATGATAGATATTTTGATATCTTATGATATCCTCCATTTTATAGATGAGGAAACTGAGGCTTAGCTGAAAAGTTACTGGGGAAGGAAATATGCAGTATAGTGCAAATCCATTACAATTACTGGAAAATTGGTTGAAAATGTCATTTTGGTTTAGTATATCATCTTTAAATGTTGATAATTTTGGTGCTTTGTAGTATTAGAAAGCTAAATTCTACAAGTAAAACATGTTTAAAACTTGGGAGGAAAAGCAGTAACTTATAACTCAAAATATACTTCTCCTTAAACTGCCCCAGGGAAAGTGGCATTATGGGGGAAAATGAAATATCCTTGTCTTAGCCCAAGCAAATGGACATTTAGGATGACAACAGTAAGTTCACCTACAGCATAAGATGTGTAAAAGCTTCAATTTTAGTGCTCATTTCCAACTACCATTTTCTTCTTATTCTATCATTCATGGTTTTTCAAACATGTCGTCTGTTGTTAAACCCCATTTCCTTATTAATGCATTCTTAAAACTCGTTTTTGGCTTTTGTACTCACTCCACTGAAATGTCCTCAGAATCACCAGTGGATAAATATTAATGCCTTTTCTTAGCTCTTATCCTTTTTTTTTTTTTTTGGTCAACCCAGGTAACGTGGGACCTTAGTTCCCTAACCAGTGGTTGAACCTGTGCCCCCTGGGATGCAGAGTGGATACAGAGTCTTAACCATTGGATTGCCAGAAATGCCGCAGTTCTTGTCCTTCTTATATTTCATAATTTTTTAATTGACCCTGCATCTTGGGAATTCTCCTTTGAGAATTGGTCGCTTTTCTTCACTTTTAGCTTTTCTCTATGCATCTTTTTTTCCTCCTGTCCACTGAAAAAAATATCCTTGTCTTAATTTTATTCACTACTTTTTCTATACTCCTCTTTATCCATTTGGATTATTTATACTTCTATATTTCAGTAACTTAATATTTTCTACCCTATGGGTTGTCTCTTAACTTGTGAACTTTTCCACGGGTACTTATATAACTTGGTATTTGGAGACAGAACTCATTACTGTATCCCCATTTTCCTTTTAAATAGGCATCTTTGGTTAACATCTTTATCCTTAACAGACTTACCACCCTTCCTATTTCTTATCCCAGAGTTGGAGTGGTCTTTTAGTCTTTTTCTGGTTTTCACTGTTCATGTCCAATATCTTGTTAAGTTATTCCAATTCTTAGTTTTCTCCTTGAGGCTGAATTTTTTTTTTTTTTTCCTTCCCATGTTTCTGCCATTTCTTCGTATCCTTCTCTGCAGATCCATATCATCTGAGGCCCAGGGTATTGTAATTCTTAATTTTCAGTTTCCTTGCTCCCAAGATCCCCACCTTGTTTGCTTCCAAGATTGTCCTCCTCAAACTCCATTTTTCTGATGTCTCATTTCACAAGATAATCAAGATAATTTTCACATCAGGTAATTCCTATCAGAGCAGTGATAGAACCTTGTCCTCTATTACCTTGTCCTCATGTTTAATCCACCTGAGCCTCATTTCTCTCTAGCATATTCACCTTGATTCATCATACTCACACTTCTGTGACCTTCCACTGATGTCTCTTATAAAGCTCTTGCCTCTGTGCCTTTTTCATGCTGTTCCTTTTGCTTAGATTTCTCTTTGGCCCCAGCTCATGTTCATTACTCCCTTCAAAGCCTAGCTTCCATTATATCTTCTGAGTGAGCTCTCCCTGGTGATTTCACCTCACTGAGACCTCCCTTACTCTGTGCTGCCTCAGCACTGATCCTTTAAGTTTGTAGTGTGGTCCATGCACTTACTAATATGTTGTTTTGTAATTATTTTCTAGCACTCTGTATTGTAGTTTCATGTTTGTATTTATTTCCAAAATTAAATTGTAAGCTCCTTGAGGGCAGGAATAATAACTTTTACATTTGTATCTCTGCACCCCTTAGTGCCTAGTACAGTGCTGAGCACATAGTAGGCGTTTAATAAATGCTTGTCAAATTATTGTGTGCATTATTTATGGTGTTCTATCTACAGAAATATTTACACTGCTTTCAAGGACATATGTCTCTTCATTTTATGCACAGACCCATTTCCATTATACATCAATAACTGCATTGAAGATGGAAGACAAAAAAATTTAATGTTAGGGTATGTGTGAAAAGTTGAAATGTGAAACTTTTCATTTGTTCAGATTTGTTTGTTGGTTAAGAAGGAAAATAGGAAACTCTAAAGATTACTGCTTATCATTGCAAAAGTGCTTGAAAATAGGCTTTTTGTGTCTCAGGTAGACCATTGGTTCCTAACTGGAGAAATTTAACAATGTCTGGAGACAGTTTTGGTTGTACTATCAAGGGATGGCTGGGATACCACTGGCATCTAATGGATAGAGGCTAGAGATGTTGCTAAACGTTCTGTGTGCACAAGACAGCCCCCACAAAAGAAAACATACCCAAGTTCTATATGTTTCATAGTGCCCGAGAAACCCTGGTCTAGGTATATTTAAGGTATATAGCAAAAGGGAGAGAAAATACTAGATTTTTTTTACAATTAGAAAAATCAGCTATGCCAAGCTTTATGAGAATCTGTTTATATATTTTATAATCTGTAATATTATGAAAGCCTTAATGTTTGGAGTTCACAGCAACATACATGTATGTTTTAAGGTTGCTCTCAGCATCAGATCTGCCTTCCAAAGTGGAAGGTGTTGTAGGAGTACAAGTCTAGTTTTAGCCTTCTGTATCTTGTTTTTTCCCATAAAATGAAAGATAAAACACTGGGGTCTATCTCTTTAGCAGGGAGCCTACAAATCAAAGATTTAGCTTTGGGGACAACACGTGACCATAAACCACCCCTTGGGCAGCCACTAGACAGGAATGACTGCTAACTCCTAAGGAAACCCCAAGCAGACCCACATAAAGTTTTTAACATACTCTTAATCCTGCTTAAGAAGACACATGTAGGGGGAAATATGGCTAGTCAGAAATACAATTAAGAAATTAAGTAGTGTAAAAGACAACTTTTTAAAAACTAGTCTCTTTTTGCAACTCAATGGTACTTTTGATAGATGTTAAAAGGATCAATCCCAGAGTTAGAAAAATAAGTATGTAATACATCAAAGAAATAATTGTGCTCTGATGTGTTTAATTAGTCTGTAGAATGCTAGGTTTGGAAGTGACTTGAAATCATTTTCCAGTCCATTATTCTGTAAGGGAAGGTCCTAAAGAGGTCATGTGGCTTGCACCAGGTGATCCATTAAGTTAATGGTACAGGTGGAAACAGAATCCAGGCTTCCGGAGGCTTTGCTTCTTTGACCAGTTATGACCCTTGTTTTATGTTCTTGATTCATACAGTGCCATAGAATGTATTCATACTTAGTGCCGCCTCTTGTAGTGTTTTTAATCAGCTTGTATGTCCAAACCAGTACACTGGTGTCCTGAGTTCTTTAATGAACGCCTGAGTAGTCCAAGGGATTTTGCATTATTGCAGCCCATTTTTGAAGGTCTTGCTCTCTCAGGTCGGCCCGTAATCTTGGAGAAAGCACATAGGATGTGCAGCATTGGCATTCAGAACACTAACGATGAAAACCGGAGCTCCTGCCGTCCAGTGTGTCGGTTTTAGGAATCCTGTAACACTGGAGATGTCCTTTCCCAGCTGAAGTCTTTAAATTCCAATATTCAAGGCTGGTTCTACCCTGGGTAAAATCAGGAAGTAAAAAATCACCTTTGTGACGGGTGAGGCAGGGATTGCGAATCTTGGTAAAACTCGGTTTAGGTGCTCTCACAAAAATAAGCAGGAACGAAACCTGCAGCCAGGCCCCGAACCCACGACTGGCAGTCAGGATGCAAGTGAGGCCCCGCCCCGGAAGTGCTGAGAGACTTCCGCCCACGAGGAATTCTCGGAGCTGGTTGCTTCTCTGGCTGCAGTAGGGTCCTTTGCTCTTGGACTGTTGTGTGGTGGGCACTGCTCAGAAGTATTGCAGAAAAGGGAGGCCCTCGCGAGGAATCTTACTGAATTGCAGACTGTCCAGTTACAAGAAAGCTGCCTGTCTGAATTTTTAGAAGAGCTGCTTTTGTTGGTTCCAAGGATTCTGTTACTAGAAAACTCTGCTCTGAGCTGGCTCCTGCAGCTCCTTTGACAATGACTGAGCCCAGTTCCTGACTCTTCTGCTGAGTAATACCAGAGATTCCTCTCACGAACCACTGAGAGGGAAGCCTCCAGGATCCTAGAGCGGACGACTTGATGTCTGGGGCGGGGTTCTGCGGAAGTCGACCTCTGGAGGCCACTGCAGGCATCAAAGGCCCCTTGGTTCGTCAAACCACGGTTTTCCGGTGAGACAATCCCCACACCTGTCCTGATTTCACATGACCCTTGCCTGCCGCTATTCCATGGATGAGAATAAAAAGCACTGCAGGAGCCAGCACTTTTTTCTTGTTGGGCCTCTTGCTAATGCTATTGCAGTAAGTAATTAAAGGCTTGACTGTGTTTCGTTTTTGCTTGTGTTATAATGCAACA EMBV3_14885 ATACTGTCAGCCCTGCCATTTGCTTCTGCCTGTATCTGTGTTGTCCCTGGAGGTCTACTG Gene GeneID:512725|SLC17A4:XM_002697561:367_cdna Constitutive 0 NULL GeneID:512725 23 GENE SLC17A4 NULL solute carrier family 17 (sodium phosphate), member 4 EMBV3_36344 TTCAAATGTCTAAGCTTATTGCTTGGGTTTCTAGTTAGAACTATTGAATGTGGTGATGTC Gene GeneID:539513|TANK:XM_002685342:199_cdna Constitutive 0 NULL GeneID:539513 2 GENE TANK NULL TRAF family member-associated NFKB activator EMBV3_07807 GGGAAGTGAGAGCAGATGTGTCCAGACATGAGGGATCAGCGGAGATAGATGAGACTAAAG Gene BVT0102_060255 - 1 EMBV3_31661 GK000010.2:90134652-90228804 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023067 1 XLOC_013737 NonCoding TCONS_00023067 XLOC_013737 NonCoding NonCoding - 10:90219678-90219984 - TSS16957 306 0.584967320261438 1 0 0 0 0 0 0.000233950665348606 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000679597145294258 2.35014517348252e-05 0 0 0 0 0 0.000161170796176999 0 0 0 0 0 noncoding 0 0 0 0 0.0452848669849751 0.711496525984946 0.0455929177579963 0.520774520417708 ACTCATAGAGTGTGATGTACAATGTGCTTCATGATTTTTTTTCTTGCTTATTTCTTTAGTCTCATCTATCTCCGCTGATCCCTCATGTCTGGACACATCTGCTCTCACTTCCCTCTTGGTCTAGAATGCTCTTACTCCCCTTCTTCTTCTGACCACTTCTTTGGCATCCACTGAGGCTTCGTTTAGGGATCACTCCTCACAAAGTCTTTCTGGATGTCTAACGCCTCCTCCCAGGATGGTCTAGATGCTCATCCACAGCACCCTGGGAATATCTCTATCCTAGCAATTTGCCAATTTGCATGTCTG TCONS_00015384 TCONS_00015385 TCONS_00015386 TCONS_00015387 TCONS_00015388 TCONS_00015390 . 3' 84140 TCONS_00015384 TCONS_00015385 TCONS_00015386 TCONS_00015387 TCONS_00015388 TCONS_00015390 . 3' 84445 EMBV3_12447 TCTTCTAACCTCTAGGGTCAAATACCACCCCCACCCCCATCATCTGCCCAGAATGGTTCT Gene GeneID:504506|RNPS1:NM_001101841:57_cdna Constitutive 1 NULL GeneID:504506 25 GENE RNPS1 MGC166060 RNA binding protein S1, serine-rich domain EMBV3_33757 CACCCTCCTGGGTGGGATTTGGAGTGATGGGAAGGTTTTTAAGGGCCAGAGATGGATCTT Gene GeneID:513091|NUMA1:XM_002693433:64_cdna Constitutive 0 NULL GeneID:513091 15 GENE NUMA1 NuMA SP-H nuclear mitotic apparatus protein 1 EMBV3_23763 GAGCCAGTTTAGCGTGGAGAAGCTGCCCGAGGCCTTCAGCCCGCAGGCTCCTGGCCTTTA Gene GeneID:618510|SHISA8:XM_002687951:42_cdna Constitutive 0 NULL GeneID:618510 5 GENE SHISA8 NULL shisa homolog 8 (Xenopus laevis) EMBV3_09235 ATGAGAGCCTCTTCTCTGGGGGGTAGTGGCATTTAAGGTCCAAATCAGCTAGTGCATCAG Gene GeneID:512062|YRDC:NM_001075550:131_cdna Constitutive 0 NULL GeneID:512062 3 GENE YRDC MGC142740 yrdC domain containing (E. coli) EMBV3_33690 TCTCGAAGACCGTGGGTCCTTGGGAAAGTGATGGAAAAGGAGTACTGCCAGGCCAAAAAG Gene GeneID:539858|RB1CC1:NM_001114155:44_cdna UTR3_Alt 2 NULL GeneID:539858 14 GENE RB1CC1 KIAA0203 RB1-inducible coiled-coil 1 EMBV3_32545 AGGTTTCCAAATACGGTGACCTGGCTAACTGGATGATACCCGGCAAGAAGGTGACAGGCA Gene GeneID:100297708|LOC100297708:XM_002686464:501_cdna Constitutive 0 NULL GeneID:100297708 3 GENE LOC100297708 NULL similar to 3-oxoacid CoA transferase 2 EMBV3_14361 TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCCCCTCCCAGGTACCCCTTTATA Gene GeneID:540181|ARID1A:XM_002685761:549_cdna Constitutive 1 NULL GeneID:540181 2 GENE ARID1A NULL AT rich interactive domain 1A (SWI-like) EMBV3_33744 TGGAAGGAGTGGGGTTGTGAGGGGATGGGAATGGAGGAGAATATGCAAGCTCTCTGTTGT Gene BVT0102_152207 + 1 EMBV3_03632 GK000006.2:23178028-23187623 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202755 TCONS_00204709 TCONS_00202759 TCONS_00202754 2 XLOC_124027 XLOC_124509 Coding TCONS_00202759 XLOC_124027 Coding Coding SLC9B2 6:23147355-23182222 j TSS152050 5233 1 TCONS_00202759_3 326 0.289126695967896 7 0.850111856823266 0.000230182813780193 0.000180325450439587 5.60215947022813e-05 0.000105087435659747 3.30350220963438e-55 6.40435148861384e-05 4.1893664021681e-05 0.000274014424316982 0.000241340078248486 2.26055196207465e-05 8.74765612557899e-07 0 6.21148881532263e-05 7.1904695179045e-06 0.000101756224912675 0.000321473802258491 3.775992871676e-05 2.62175265504774e-13 0.000255408443263633 6.79796073649703e-05 1.35495613388314e-05 1.13729563568135e-08 1.46540402307009e-07 0.000200458652467363 0.000419700541865329 1.40931196281797e-05 0.000212515883708214 1.30718333180285e-05 2.79685509084177e-18 1.78426764625253e-09 NM_001193108.1 SLC9B2 Bos taurus solute carrier family 9, subfamily B (cation proton antiporter 2), member 2 (SLC9B2), mRNA. 0.0 1474 99.88 0.156506783871584 XM_005262758.1 SLC9B2 PREDICTED: Homo sapiens solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 (SLC9B2), transcript variant 0.0 1335 82.03 0.253200840817886 TCONS_00202759_3 sp|Q86UD5|SL9B2_HUMAN SL9B2_HUMAN Mitochondrial sodium/hydrogen exchanger 9B2; 4e-163 471 86.19 0.819018404907976 1 coding 1 1 1 1 -0.107481117621183 0.532361036412834 0.00972539010359431 0.903581444091254 TTCTAGGCATGCTGCTTGCTGGCTTTCTCATCAGAAATGTCCCTGTCATCAGTGATAACATACAGATCAAGCACAAGTGGTCTTCTGCTTTGAGAAGCATAGCCCTGTCTGTCATACTGGTCCGCGCTGGCCTTGGGCTTGATTCAAATGCCCTGAAGAAGTTGAAGGGTGTTTGTGTAAGGTTATCCTTGGGTCCTTGTCTCATAGAAGCGTGTACATCTGCTGTCCTGGCCTACTTCCTCATGGGTTTACCATGGCAGTGGGGATTCATGCTGGGTTTTGTTTTAGGTGCTGTGTCTCCAGCTGTCGTGGTGCCTTCGATGCTCCTTTTGCAGGAAGGAGGTTATGGTGTTGAGAAAGGCATCCCCACCTTACTCATGGCTGCTGGTAGCTTCGATGACATTCTGGCCATCACTGGCTTCAACACCTGCCTGGGCATGGCATTCTCCACAGGCTCCACAGTTTTTAATGTTCTCAAAGGCGTTTTGGAGGTGATCATTGGTGTGGTGACTGGGTTGGTTCTTGGATTTTTTATTCAGTATTTTCCAAGCAGTGACCAGGACAAGCTTGTGTGGAAGAGAGCATTCCTGGTCTTGGGGCTCTCTGTGCTGGCTGTGTTCAGCAGCACATATTTTGGTTTCCCTGGCTCAGGAGGACTGTGCACGCTGGTCACAGCTTTCCTTGCAGGCAGAGGATGGGCCAGCACAAAGACAGATGTTGAAAAAGTTATAGCAGTTGCCTGGGACATCTTTCAGCCCCTTCTCTTTGGACTGATTGGAGCAGAGGTGTTAATTACAGCTCTCAGACCAGAAACTATAGGCTGCAATAGGATCTGTGGCTTTGGACACAGCAAGATCACATGGAGAGAAACAGTTAGAAGGATATGGAATGGATGTGTTGACAGTGGCATTTTTGTCCATCATCATCACAGCCCCAGTTGGAAGCCTACTTATTGGTTTGCTCGGCCCCAGACTTCTCCAGAAAGCTGAACAAAATAAAGATGAAGAAGATCAAGGAGAGACGTCTATACAAGTTTAGAGGTGAAAAGAGAGAATGCTGAATACAGCCCTCAGAAGCATGCTGTCAGTGCCTGCTTTTGTCAGCTAGCAGAGACTAGTTTTATCCGGATGGATATTGACATATTTAGTGTTTAAGTGTAAATTAATAGAACCAGAATGTGGCTTTTTTTAAAAAAACAGCATTTTTAGCTATTACCGGGACGGTGGTAATGTTCTACGTCTGCAACCTGCTCCCTTCCTTATTTTTTTTTTCTTCAAATAACTATTCATCATTATCTCTTAGCTTGTATAGGGACATGTATACTTTGGGCTTCCCTGGTGGCTCAGCGGTAAAGAATCTGCCTACAACACAGTAGATGTAGGAATCACAGATTTGATCCCTGGGTCGGGAAGATCCCCTGGAGGAGGACATGGCAAGCTACTCCAGTATTCTTCCCTGGGAAATCCCATGGACAGAGGAGCCTGGCAAATTACGGTCCAGGCGTTGCATGGACCTAAGTGACTGAGCACACGATACTTAAGTGTACTACCACAATTTAATTTCAGTGTCCTGTTTTGCTAGCCAACAGCTTGCTCTGACTTAGTGTTACCATCACAATTTCATAATTCATGGTCACCTAACCTTTCATGCCTTGAATTGTTTTGGGCCCTTTTTTCTTTTTGTTTTTAAATACCATAACACAATCCTTCATCCATTTCTACCTTCCTTCTTCATCTGCCTCTTTTCCATTTCTACCTCTCTTACTTGTCTTTCTATGAAGTAGTATTTCTGATTGTTCCCACCAAAAATTTTTAAAAGTACACAAAATAATTTAATTGGTTCTTTCTCTTGCACCTGTCCATGTGTCAAAGACTAAATCCTATCCCCATAGTTAGCTTCACAGAGCCCCCCATTTCAGTGGCTCATCTGAGTTTCCTTCTACCTAAGCAGTGTCCTGACCTAGCCCTTTGTTTTTTGTGACCCACATTTTCAGGCTCTTCCTGTTCTCTAGGTAAGAGATAGCTAATTTTTAAATCTATGTCAGCCTCATGAATACCATATTAATCAGGGTAAGATAAGCTGCTATAATAAAGAAATGAAAAATTAAATACTTAAATAGAAAAATTTATTTTCCTCTTACAAAACCAGTTGACAGGGTTACTCTGCTCATGAGGTTTATTCAGAGACCCATGTCCTTCCATCCTGAGACTCTGCTGTGCCCTAGCTTAGGACAAAAGTCCCCTTTCTAGTCTTCAGGAAGAAGGAAAAAAAAGGAAGCCCAAGACAAGCAATTTATTTTTAAGGAAGTGATGTGGCAGCAGATACATCTCTCCTCTTACATTCTGTTGGTGATAATCACACCCACCCAGCTGAAAAGTATTATCTCTCACTAAGCATTCACATTCCCGGGAAATGGAAAGACCAGATTTGAGAGCCAGAAGTACTATCGTGTTGGGTGTTACCATCACCTAGTAGCATATCCTTGCAGGTTAACAAGGACTATCTAAAGATGTAACTTTAACCAAAAGAATGACTTCCATGGCAAGAATTTCAGGAATTGTGACATGCCAGTAGAGAAGATAAGAAAGTCTTACCTCAGAAGTCTCATTTTCTCCCACTTAATCAACTGACCATTTCTGCTTTTTTGTATCACTTGTTAAGTTCCTGTACTCTAGGTCAGCTCCTGCCTAGTTGTTAGAATAATCATGTTTAGATAATGTTGTCATTAGACTACCTAAGGTTCTGATTTAATAGAGACAAACATATGAACAATCTGTAAAAAGGGCTATAAGTACTCTGACAGAAGTGAGTATAGGGTACATTCACCCTTCAGACTACTCTTCCAACCCTTCCCATCATGACTTTCAAGCTGTTCTAAACCAGCTTAATTTTTATTAATCTAACATAATAGGAAGCCAGAGAGTTTTCGTTTTTACGTCAGCCTGACTCTGGTTCCTCTATAGGACTGTATTCCCTTAGTGTTTATGTTCTCAACATGGACCAGACTAGTTTATACCAAAGTTCAGAGAGGTGAACTTCCTTGGCCAGATGCGCCTTGGTTGTAGCACCATAAACTTAATGCTCATCTGGTCCTCTACTTTCACAGGCTCTGAAACTAGAGTCACCCAACAAATATTTACTAAAGCCTTTGGTGGCCCAGGCACATCATAAAGACTAATGTTGTTACCATCTTTAAGGATCTGACAGTCTGATTGAGGATAGCGACCATTAAACAAGAAGTTGCAAAACAGTGTGATAAGTGCCATGATGCAGAGAGTACAGGGGTGCCAGGGAGCTCATAGCAGGAGTAACCCATAAATCAGGGGGAGGTGCACTTTAGGCGCCCACTCCAGCGTTCTTGCCTGGAGAATCCCAGGGACAGAGGAGCCTGTTGGGCTGCCTTCTATGGGGTCGCACAGAGTCGGACACGACTGATGCGACTTAGCAGCAGCAGCAGCACTTTAGGCACAGCCTCCAGAGAAAGTAGGACCTCGGCTAGGATGTGGGGATAATTAGGACTTAGCAAAAGGCATGGGAGACCCAAGGGTGCTGCAGTTAGTGCAGGTTCCCATGTTCACCAGTAACTCTTCTCCATGTAACATAACAGGCTTTCAATACTAATACAAAATACAGTTAGTATAAGCAAATAAGAATGTTGTTGTAAATATTCAAGGCCCCAAGAAAGAATTAGAAATGGAAATTCAGAGTGTAGAAATAGTTGAAAATCCCCAAAAGTGACTGCCCATAGCCTATGCCATTTTCAGAGCATGTGGTGACTTTTTACCTACCCCTCCTCGGTGAGCAGCCACCAACCAAATCTCTGTGGCTCTCTGTCCAGTGGGCTTCCCTGGCAGCTCAGTGAAGAATCTGCCTGCAATGCAGGAGACCCAGGTTCCATCCCTGGGTCAGGAAGATTCCCTGGAATAGGAAATGGCCCACTCCAGTATTCTTGCCTGGAGAATCCCCATGGATAGAGGGGCCTGGCAGGCTACAGTCCATGCAGTCACAAATAGTTGGACAGGACTGAATGACTAACACTTCCACTTTCTCTGTGCGGTGTTGGTCTCTGCAGGACTCACTGTGAAGTCTCAGGTTTGTTTTGTCACCACAAAGTAAACCACAGCTCTTTTCTTGGTTGGTAAACTCAGAGTTAACTTGATACAGAATGCTGACTCAAGCCAATCAAACTTACCCCACCCCACCACAGATAGAAACCATTGCTCTAACCTCTGGGTGACTGAAAGAAAGGTGTATCATATACATACTTCTATCAGAGTACTTGTAGTCCTTTTTTCAGTTTGTTTCTGGGTTTGTTGCCTATTAAATTAACCCTTGAGGGGTGGGAGCCTTATCTTGGTCATCTTTGAAACCTCAGCAATTTTTACAGGGTATGGAGCAGGGTGGGCATTTAGTAAATTGTAATGAACTGAATCAGTGAGGAGATTCTCTTTCAGTATCAGAAACCTACCTGCCGCATAACAGTTTAGATTTTAGTCCACTTAGTGCATCTAAGCTGCTCGGGCTACTACAACAAAATACCATAGACTGAGTGACTTAAACAACCAGTAATTATCTTCTCACAATTCTGAAGCTGGAAGTCAAATGTGAGAGTTGCCAGCAATGATCAGGCTCTGATGAGAGCTCTCTTCCTGGCGTGCTAATAGCCTCCTTCTCACTGGGTTCTCACGGGGTGGTGGAAGGAGTGGGGTTGTGAGGGGATGGGAATGGAGGAGAATATGCAAGCTCTCTGTTGTCTCCTCTAATAAAGTCACTAATCCCACCATGAAGGCTCTAGCCTCATGACTTAATCTAATATAATTACCTCTCAGATTCTCCCTGTCCAAACACCATCACGTTGAGGGGTTATGGCTTCAGCTTATGAATTTAGTTGGGGGACAGAATTCAGTACACATCAAGGGCTTCATACTTTCAAGGACAGCGCCAAGCAAACACTGTAAACTTGCTCTCTTCAACACCCTTTTTTTCCTAAGGTGGGTGCTGTCAACCTCTCCTCTGAGAAGTGTTTGTTTCTCTTTAGGCAGACTGATTAGGTTTCTGCTTTTTAAGTTATTTTCGCCTTCCCGTGTTTTCCTTTCTGGTATTAACTTCATATAACATGGACTGGACTTGAGTGTTCTCAAAATGTCCTCAGTCATGTGTTTGCAAATGATCTCACCCATTACATTCTTTAAAAATAGTAATGATTATTTTGTCTGATTACAAAATAATACAT EMBV3_04727 GCCGCGGCTCCTGGGCAGCTCCGGCGGGCGGTGGCACAAGATCTCTGCAAAGTAGCAGGT Variant GeneID:521892|ETFA:NM_001075822:103_cdna 164^310 1 EMBV3_10505 GeneID:521892 21 GENE ETFA NULL electron-transfer-flavoprotein, alpha polypeptide EMBV3_03511 CAGAAGCATCTGAATAACTTCGAAGCCACACACTGCACCCCACTCCCAACCCAGAACTTC Gene GeneID:513252|BAT5:NM_001075605:99_cdna Constitutive 1 NULL GeneID:513252 23 GENE BAT5 NULL HLA-B associated transcript 5 EMBV3_43194 AGGCTACTGTGGAGTCTTTACATAAGTCATACACACAAGGTGGGGAGTGAGGGGACAGAG Gene BVV0102_117985 + 0 NULL GK000005.2:5338407-5557937 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193870 TCONS_00193868 TCONS_00193871 TCONS_00193872 TCONS_00193874 TCONS_00193873 TCONS_00193869 1 XLOC_117612 NonCoding TCONS_00193872 XLOC_117612 NonCoding NonCoding - 5:5343574-5428894 - TSS144796 2641 2 TCONS_00193872_6 82 0.32222642938281 3 0.969080744031224 0.000545096365487655 0.000795080281216593 6.41435151546764e-08 2.57883664714047e-06 0.000107995978076013 3.4126257382752e-07 8.44114263965179e-09 9.03593430516661e-19 0.000515989731351982 2.5761195734964e-06 0 0 2.06430790167923e-06 4.91374600693237e-20 1.24899549018714e-05 0 0 1.14547853390947e-06 0.000469935209367177 0.000602921685242151 1.05798868668671e-50 0 0 0 0.000182303665218549 1.02036783990867e-49 0.000132222438593664 0 0 0 XM_005201266.1 CD80 PREDICTED: Bos taurus CD80 molecule (CD80), transcript variant X1, 3e-165 587 95.38 0.138962514199167 0 noncoding 0 0 1 0 -0.00585430602849504 0.967321483718981 -0.0371088050290101 0.583711285120271 AAAAAACATATTAGTAACAGAAGAGGAGACCCAGAGGGAAGCAGAAGCTAAATATAAAACCCTATTCCAATGGCTGTATTTAAAGAACAGTTTTTGAAGCTCATGGATGCTCGAGATATGCCACCTGCAAGATGAGAACAGAAGGACCAAGGAAAACACCTTCCTGTTTTCATCTCCCAGACATGCAGAGGGTCCCAGATGCCCTCCTTTGAAGAAGAATCCCTAACACTTCCCCCACTCTTTTCAGCTGTGAAGAGAGGAATCAGCATACCAGCTATAACTTCATATGACTAATGGTAACCATGGCGACCACTAAATATTCCTTCCAGACCTTGCATCTGCACAGCTCAGTGAAGCAGAGGAAATAAACGTTGCTGCTTTGAAAAATGATAAAAATAATCAGAACCAGCGACAGGCTTGGAAGGAAAGGAGAGATCTCAAATGTGAAGGTCAAGTCATTTCATCTCATTATCTCTCAGGCCTTTGTCTAATCTCAGGAGGCATTTGATGCCAACTGAATGGATAGGTCACAGGCCCAAGGGATGGAGAATGAGACTTCTGAGGCCCTTGACTAATTTTCAAAGAAGCTTCTGGGGTTCTGACAATTATTTGCTGGATTGGTGTGATGACCCCTATGCTGAAATGCTGAAAATGAACATTAAGGCCACTACAAGAGGCCCCTGGGGCTTATGGTAGTTCTTGATGTCAGGGCATCTTAGTGGTTTAAGGACAAAGTAACGAGAAGACTGGCCAAGGTCAAATGACAGTCAGAGAGCAAGAATATAGGCAGGACAACTGGGCCTCCCAAGCCCTACAGATTAGATGAGAAGAATGGATGATGGGTCGACATCATCTTGGTAAAACAGGGGACAAGCTCCAGAAAGACTAATGCCATGATGCATCCCAGGAGAGTCTCCCAGGAAACGTAAATGATTGGATTACTGTAGAAGAGGGTAGGGTCTCTGAGAAACTGGAGAGCCTATGGCCTGTGTCAAGAGGGCAGCCTATTGTTGCCATGGCAGATCCAGAGCTCTCATTTTTCAAGAGAGGCTATAAATCTGGATTTTTAAAAAATAATTAAATTTCTTAATTGTGTGTATGGGCTGCCATTTTGCATGCTCTGAAATTGCAGTCCCATTTTGAAAATGAAAATAGGAAATGCTAGAGAAATGGGATTCTGTATAATGACCTGTACAATGACCACGAGACCATGAACATTCCAAATACAATCAAGTTGGCCTGGGTCTGTAGTGTCAGGGAGGTCTGTGTGTGTGATGCTCTTAGAAGTTGGCATTTTCGGAATTACAGTGTGCTTGGTTTGGAGACAGAATGTGTCAACAGATGGAAGCGATCTGAATGGCAGGTTTAATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCTTTGAACTGCAAGGAGATCCAACCAGTCCATTGTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAAAGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGGAAGAGGATGAGATGGCTGGATGGCATCACTGACTTGATGGATGTGAGTCTGAATGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCGATTCATGGGGTCGCAAGGAGCCGGACACGACTGAGCGACTGAACTGAACTGGACTGAGGAGGACGCATGCTGCAGTCTGTCTCTGGCAGCAGGGGCGGGGAGCGCCTTTCCCAGCGAGTGGCGAGTCGGTCTTCCTGAAGTGATTCCCCACGGTTCCTTGCCCCTACTGTATTCACCTGAATTCCAGTAGACACATTAGCTCCAAGAACTCTGCCTTGAGCCCTGAGCCTGTCCTGTGCTTTAGGCTACTGTGGAGTCTTTACATAAGTCATACACACAAGGTGGGGAGTGAGGGGACAGAGAGCGCAAGTAGACCACCTGACAGAGGAGAAGAGCCAGCATACATAGAACTGAGTACCGCTCCGTCCGCTGCGTCACCCCACGGGGCACTAGTCTGGGTACTGGGTAACAAAACTTAGCACTTGGGCTCTGGTAGGGAGCAGTGGATTCTTTAGCCCTTTTGAAAAGCATAATTACTTTCCAGATTACAGAATTATTATAGGAAAATCTGAAAACTGGAAAGAAAAAGCTTCTAATCATATCATGAAATAGAGATGAAGAGGTAGTTCACAGATAAGAGAGACCTGTCAATAAAATGTCTTGTTGGAAATTACTTTGGTGCAGTGCTAGCCTCCACGGACCATCCCAGACAAGTTATTATAGAAGTCATGAAACGGAAAGGCTCACAGATTCACTTAATATGCTGGAATAACGTAGCTCATTGAATCAGTTTAAAACCCAGAGTGAGAAGCAGTCAGAGGAAACAGTGCACCCGGGCAGGCGCTTGTGGGCAGAAGGCCCACAGACCCTGCAGCGTGTGCGACACTCTCCGTGTGTCCTGACTGTCTGCCACACCAGCCTTCCTTCCTGGCCATGGGCACCTGCAGGCCAGAGTTTCAGGGAAGCAAGGGGGTTCGGAGGGCTCCCCTGGGGGCTCAGACAGCAAAGAATCT TCONS_00193879 s 3' 211970 TCONS_00193879 s 3' 129044 EMBV3_30054 GTTAAAGGAACATAAGCATGCGCCTATAGAAAAAGAAAGGGGGAGATGCGGGGAGCTGCC Gene GeneID:100337347|LOC100337347:XR_083696:17_cdna Constitutive 0 NULL GeneID:100337347 6 PSEUDO LOC100337347 NULL envelope glycoprotein-like EMBV3_14733 AAGATAATCCGATATTGAGCTTCAGTGGAGAATAAAGCCCGCTGGGAAGAACGCACTGCC Gene GeneID:534830|SCLT1:XM_002694387:232_cdna Constitutive 0 NULL GeneID:534830 17 GENE SCLT1 NULL sodium channel and clathrin linker 1 EMBV3_12849 CAATACTTCGTGCTGTTGCTGCTGACTGATGGTGCTGTGACAGATGTGGAGGCCACACGT Gene GeneID:615677|CPNE1:NM_001076940:1300_cdna Constitutive 1 NULL GeneID:615677 13 GENE CPNE1 MGC143186 copine I EMBV3_25335 TTTGAAGGAATCTGTTTCTCAGGTATCATGACAGTGCTGTCGATGATCTTTTCTGCTCTT Variant GeneID:507280|TM4SF18:NM_001034287:17_cdna 218^307 2 EMBV3_40634 GeneID:507280 1 GENE TM4SF18 MGC126972 transmembrane 4 L six family member 18 EMBV3_06567 GACAGAATCAACCTCCCTCGAAATATAGTTAAATATGCGCTGTATCACGAATTTCTAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29276 CTGCACTTTTCTGAGAGCAGGAAGCTAGGCATGGGTAGACAGGTGTGATAAAGGTGGTGC Gene GeneID:784035|RNF43:XM_002695579:106_cdna Constitutive 0 NULL GeneID:784035 19 GENE RNF43 NULL ring finger protein 43 EMBV3_07338 TCCAATTCCAAACTGAGAGGTCACAACAAACTGGATCAAGCCAATGCACACGGACGTCTG Gene BVV0102_033499 + 0 NULL GK000012.2:19328178-19338814 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036415 TCONS_00036410 TCONS_00036414 TCONS_00034741 TCONS_00036411 TCONS_00036413 TCONS_00036416 TCONS_00036409 TCONS_00036412 2 XLOC_021145 XLOC_020742 Coding TCONS_00036409 XLOC_021145 Coding Coding KPNA3 12:19335886-19343070 j TSS26510 3986 1 TCONS_00036409_1 150 6 0.44591396352499 3.36404442694244e-09 0.000434206669904196 0.000358566680907423 0.000376754918308026 0.000283798836853591 0.000261616519521656 0.000539745949312027 0.000233597542350902 0.000731900217468343 0.000297570414612519 0.000144333577733537 0.000248556574803572 0.00015679542040982 0.000524000536296753 0.000262008660530966 0.00374586903431645 0.00192648994800028 0.00225167989235267 0.000333581968843928 0.000309924765579403 0.000148670784041618 0.000486768674580753 0.00162458862366102 0.00391445965102538 0.000591527352811033 0.000288667029472774 0.000328853146837571 0.000441448043187834 0.000343665649718396 0.000458770108681591 NM_001192773.1 KPNA3 Bos taurus karyopherin alpha 3 (importin alpha 4) (KPNA3), mRNA. 0.0 1819 99.70 0.254641244355243 NM_002267.3 KPNA3 Homo sapiens karyopherin alpha 3 (importin alpha 4) (KPNA3), mRNA. 0.0 4374 92.33 0.757400903161064 TCONS_00036409_1 sp|O35344|IMA4_MOUSE IMA3_MOUSE Importin subunit alpha-3; 4e-103 309 100.00 0.993333333333333 1 coding 0 0 0 0 -0.0673050721508816 0.658358599143442 0.041386541624522 0.465898984992137 CAAAAAAGTTGGGGATCACTATTGAGAGGGAGCTCATGAAGCAAAAATGAAGCAGTGTGGTTCCTTTCCAACATTACAGCAGGCAACCAGCAACAAGTTCAAGCTGTAATAGATGCTGGATTAATTCCTATGATTATTCATCAGCTTGCCAAGGGGGACTTTGGAACACAAAAGGAAGCTGCTTGGGCTATTAGCAACTTGACGATAAGTGGCAGAAAAGATCAAGTTGAATACCTTGTACAGCAGAATGTAATACCACCATTCTGTAATTTATTGTCAGTAAAAGATTCTCAAGTTGTTCAGGTGGTCCTAGATGGTCTGAAAAACATTCTGATAATGGCTGGTGATGAAGCAAGCACAATAGCTGAAATAATAGAAGAATGTGGAGGTTTGGAGAAAATTGAAGTTTTACAGCAACATGAAAATGAAGACATATATAAATTAGCATTTGAAATCATAGATCAGTATTTCTCTGGTGATGATATTGATGAAGATCCTAGCCTCATTCCTGAAGCAACCCAAGGAGGTACCTACAACTTTGACCCAACGGCCAACCTTCAAACAAAAGAATTCAATTTTTAAATTCAGTTGAGTGCAGCATCTATCCCACATTGAATACGAAGCACCACCAGATGGCCACCAAAATGACAAGAGCAACAGCAACCGAAGGCTCCAAAACATACATGCCTCTTTGTTTTGATGCTTCTGAAGCAAGCCATGTCTCAGTCACTTTGCAGTTGCCGAAAGTCACTATCCACATGGACTGTAAATGCATATGCATGATTTCCTAAACTATTTTAGAATTCTCCTTAACAATCTTGACTACCCTATTTTCCCCCGTTCCCTGGTGCCACACGCTGACATCTGCAATCTCCATTTTAGAATATTCCATAGTGGTGGCATGTCAGCTGCCCACTTGATACTCCTTTGGAAAATGGTGCGCTGTGGATCAAGACACTTTGGTATGACACATACACGCGTTGGAAGACTTTAAAGAGGTGCAGTCTGATCTGAGCCTCCATCATTGTCCTCCACAAACATATTTTCATACTCTTTATGTGGAAGAATAGATTTTAAAAGTACAAGCCAAATGATTTTCATTGGTGGAACTGACACAAACAAAAAGTAACTTAAAAAAAAAGAAACTTGGTTATTGATTAAACAGATAAGTTTTAAAAAACTGTGCTTCATCTACCAGTAATTGATGTGTTTATTATCTGCCTCAGAAGCCAGGGTTGGAGGAAGGACTTTAGCTATGGATGGTAACGCTTTCGCCATTATACCTAATTTTTGAGAACAGCAAGCCCTATTTGACCACTCACTTCAGCCTGTGTGTTCCTGCTGTTTTGAAGTAATCAAATGCTGTGCATGGTATTTTACCTGAGCTGCAACCTGTTACGGACTTGAACTTCTGTTTAAGTTGAAAGCAAGAATCCCTGACCATAAAGAAAAAATAAATAAATGAAACCAAAAACCACAAAGGTCTAAAGTACCCATTGGTGATATTTAAAAAGAAAATCTTGCTTTCAGCTTTCAGGAGTTAACATTTTTCATTTTAAATTGATAATTGGATATGGTTGATTTATATTGGGTTTAAACTGTGGAGCTTTCATGTTTACTGTAATTTAGTCTTAAAATATTTTTTACTTAGTAACCAGTGCTTTTGATAATGTGGTTGGCAACAAACCAGCAACTATTAGAAGTGTCATAAAACTTCATTCTTTGAGTATTGGAAAGTTTACTCAGATCCTACTCTAAAAGCATATTCACATATAAAAAGATGCAGACAAGGATCTGCCTAGAGGAGTAATCTGCAGTTATTTAGCATAAACCTGATTTGCAGTGATCTTCAAGTAATTCTGAAAAATCTGGTATTACTGTGTAAAGTCATTGCTTTTGGTAAATTGTCCGACCCAGTTATTAACGAAAGAATATGGATTTGAAAATTTTTAAACTGAACAGTTTGTGCTGTCACAGGAATGGTTTTGTTGCTATTGTTTACTGGGTATAATTTCCCAACGCGTTGATGTGAAGGGATAGGAAATCTAAACTAATTTAGTTGTCCGATGGGAGGGGGGTGTATTTACTGTGATGAAGATGAGACACGTGCCATCAGAGCTTTGTGAATCAGCGGGGTGTTTTCACTGGTAAACAACACATAGCAGGTGTGCATTCATTACAAATATATGTATCTGCCAAGGTAGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAGTGGATACAAGCGTATGTTTAAAATGCAAGATTTTTACTTGCTAGAGAATCTGTTTTAATATAGTGGTTTGGCCTCTGATTATTTATAGGTTTTATAAATTTTAGAATCAATTTCTCTTTAAGGTGGCTCAGACTTTTCAACTCTTGTGCACATAAAATTGAGTTGAAGTTCATTGTGCCTTTTTTTCTTTATCCAAATTTTGAGTTAAAGCTTCATATGGTAACTGCATCCTGTTCAGACACCATGGGCTAAATTTTTGAAACTGTGTGGTGTTCACTAAAAGTAGGAGTAATAAAGTCAAAGCTAATTAAGGTCACAAACTTCGGTGAAACCCTTAAAGTCCAAATCTTCTTGATATTGTGAATTATACCCCTTCCAGTTTACTTCCTTGGACTCCCCATAGTTACTGACAGTTACCTTTTAAATTTTGCACACATTGAGACTGAATTGGGCCTCTACTGTGTCGACTCCTATTTCCTCTTGTGTTTTAAGTGCAAACTAACATAAGTGAACATTAGCATCAAGTAGTGCAGACGTCCGTGTGCATTGGCTTGATCCAGTTTGTTGTGACCTCTCAGTTTGGAATTGGAATTGCACCATTTCATAGACAAAGGAAACTAAGTATATTGCTGCACTTTTACGTTTTCAAAACAGTGTTGAAAATTTGCATTGTTTTTATTTTTTTTAAACTCAGTTAAAAAAGACTAAAACGTTCTTTCAAAAGAGGCATCTAAATGTGTTCCTAATTTTGTATATGGGCTTAGGTTTTGTAACCAATAAAAAAGCTGCTATCAAATATGATAAAACATCGAAGAACTTATTTTTGAAAGTATCTGAATTTCCTAGTTTTGTTTTCTATGTGGTTAAATTTAAATTTGGAATTATTTTCCAAATATTAGCCCCAGTGGAGGTGAATCATGAATTACTCTTTCACTGTATTTTAATATCTCCTTTCCACTAGAGCAAACTAGGTTGACCAGCAACAATGCTAGATTTAAGAATATTGTGTAACATAAGAAGTACCAAAATCTACACTGATTTCCAAAGCTGCTGTAGACAGTGACAGAAACAATAGAAACTTCTTGTTGCACAGGCTTGAGGCCAGAAGTCAGGGTGGTGGCTGGGGCTTTCTGTCTCGAGGGAAGGATCTTCATCTCTTCCTGCTTTCGGTGGTCCTCAGCTGGTAGCTGCCTCTCTCTAGTCTCTGCTCTCGTCGGCACAGGGTGTTCTCTGTGCGTCTCTGGTTTAAATGCCGTAACTCACAGAAAGCCATTTCAGATGATTGTGTAATTGTGACTTTCATGAAACAAAAGCTGAAACTTAAGGCTTGTCTAATCTTTGAAAACCAGAACTTTGCAAGATAGTAATTGAAGTAAACCTAACAGTTTTAACCTGTTAGAGGTTGTGGCTCTAAATGAAATCTTGGATTATTTAAAAGAACAAAGGATCAGCCAAACTTTACTTTTGTATAATGACACTCCAGATTATTTTTGAACAAACTCAGTGTATGAGAAAATAAATTACACTACTCCTATTTAATCTTGCCATCATGTACTTCACAAGGGTTGTCCTTTTGAGAAGATTATTGCTGGTAAAAATTTATGGATGTCAGTTGTCTAACAATGATGGTTATGAATCTTCTTAACCCTAGTTGACCTGGGGGTTTAAATCTATTTGGAGAAGGGGAGTATAATTTCTGTACGTTTTAAGGCATATATAGGCCAAGGAGTGCTGTCTTTAATCT EMBV3_34037 ACTTAAACCCTGGAACCCCCATTGGAGAGCTGTGTCCTGGCCATCCCCAGTCTAGAATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14289 GGGCTGGACGCAGGGTCGGTGGCTCAAAAAGAGTGCTGAATTTTTACTACGCATGCTCAA Gene GeneID:786131|LOC786131:XM_002687971:98_cdna Constitutive 0 NULL GeneID:786131 5 GENE LOC786131 NULL similar to ribosomal protein L17 EMBV3_24724 CTCCAGCTTCGAGCAGAAGACCGACACCTCGGACAAGAAGTTACAGCTGATCAAGGACTA Gene GeneID:506261|LOC506261:XM_002699222:22_cdna Constitutive 0 NULL GeneID:506261 29 GENE LOC506261 NULL similar to 14-3-3 protein theta (14-3-3 protein tau) (14-3-3 protein T-cell) (Protein HS1) EMBV3_21999 TCACGTTGGTACTCTTCCTGCATGATACCGGAGGAGGCCAAGGAAGAGCAGACAGCCATG Variant GeneID:505354|LOC505354:XM_002691635:330_cdna 143^279 3 EMBV3_40196 GeneID:505354 11 GENE LOC505354 NULL similar to zinc finger, DHHC domain containing 12 EMBV3_29550 TTTTTTCTGTTGTCCATCCCGAAAGCAAGAGAAACGTCCAGCCACTGCTGCCCACCCTCC Gene GeneID:535046|CDH24:XM_002690508:490_cdna Constitutive 0 NULL GeneID:535046 10 GENE CDH24 NULL cadherin 24, type 2 EMBV3_30478 AGCTGGACTCAGTAACTCCCCTTTCTCCAGGTAGGGATGAGAGATGCATTATTGGAAAGG Gene GeneID:338325|XIST:NR_001464:8_cdna Constitutive 0 NULL GeneID:338325 X GENE XIST NULL X (inactive)-specific transcript EMBV3_06014 CCTTCTACCTCCTACAGTGGCAGCATCACCTCGTAAGCTCCTCGATGTCTCAGAACACAT Gene BVV0101_040005 - 0 NULL GK000007.2:95464059-95599618 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24360 TTCCCGCGAGCAGTTCACCGCGGCGTCCGGGACGATTTATTCTGCTATTGGCATTGATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25828 TCAGAAGGTTCACACTGGCATCAAGCCTTTCAAGTGTGCCGAGTGCGGGAAGACGTTCAA Gene GeneID:531064|ZNF584:XM_002695511:322_cdna Constitutive 0 NULL GeneID:531064 18 GENE ZNF584 NULL zinc finger protein 584 EMBV3_24377 GCATTGTCAACTGCATGGTCGATGAGAACTGCCAGGCTGGGGAGAAGTGCTGCAAGTCAG Gene GeneID:505523|WFDC3:XM_002692483:569_cdna Constitutive 2 NULL GeneID:505523 13 GENE WFDC3 NULL WAP four-disulfide core domain 3 EMBV3_42380 TGGATATAATTTGATGGACAGCAGGGGAATTCTGGTCCCTCTCCCTGCCCTAGTATCAGG Gene GeneID:613916|C1H3ORF34:NM_001099129:117_cdna Constitutive 0 NULL GeneID:613916 1 GENE C1H3ORF34 MGC166280 chromosome 3 open reading frame 34 ortholog EMBV3_25878 TGGCACAGATACTGCTTCCTGGTAATTCCCCACACTGTTTCTAGATCTGGGAGAAGAGGG Gene BVT0101_037594 + 0 NULL GK000006.2:6988859-7036102 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28732 TTCTGCTGACCTCAGTGAAGATACCATCTCAGAAGACTGACGTGGAACATCTGGGACAGG Gene GeneID:618600|MGC134232:NM_001110183:2_cdna UTR3_Alt 2 NULL GeneID:618600 X GENE MGC134232 NULL hypothetical LOC618600 EMBV3_22353 GATTCTTAACCATTGAACCTCCAGGGAAGTCCCCACTAGCCTTCTGTTCCGATGTCAGTG Gene BVT0102_253049 - 1 EMBV3_30515 GK000019.2:3675431-3876961 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39176 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23737 TGAATGTGACTATTAACTGCCAAGCTGCAGGTGTGCCCGAAGCTGAAGTCACCTGGTTCA Gene GeneID:530624|ADAMTSL1:XM_002689568:2_cdna Constitutive 0 NULL GeneID:530624 8 GENE ADAMTSL1 NULL ADAMTS-like 1 EMBV3_09051 CCCCCTGCTGTTGTGGTACTCCAGCAAGAGGAAATCCAGGTGCTTTCCAGACTCCAAAGG Variant GeneID:506530|SSR2:NM_001015533:94_cdna 584^644 2 EMBV3_32963 GeneID:506530 3 GENE SSR2 NULL signal sequence receptor, beta (translocon-associated protein beta) EMBV3_05720 CCTGGGGGAGAAAGCGGGGAGGAAACTGGGGGTGCCTCAGAAACGTTTGCGTTTACTCCA Gene BVT0102_277367 + 0 NULL GK000002.2:94837165-94893216 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103065 TCONS_00103064 1 XLOC_062006 NonCoding TCONS_00103064 XLOC_062006 NonCoding NonCoding LOC100847622 2:94856148-94856986 j TSS76613 731 1 TCONS_00103064_1 58 2 0.129032258064516 0.000999107577838311 6.26516322070683e-05 0.00046064008647971 0.00054467723121882 0.000181119686200401 7.58436476885333e-05 3.98885965407392e-05 2.29604841833236e-05 0.0001145847294031 0.000548901062497683 1.25263162141748e-05 9.78298174488713e-06 1.64320544753835e-05 4.50450858882952e-05 5.03164639446849e-286 0.000341599207839341 0.000958828406144611 0.00696822796080157 0.000264864056051682 5.90268864242468e-05 5.39869929603452e-05 0.000772779828232232 0.000155264248478065 0.00196031778297544 0.000673431069784087 0.000555453410410195 0.000821154292212835 0.000157677832093253 0.000278595373921456 0.000318315647949787 XR_230389.1 LOC100847622 PREDICTED: Bos taurus uncharacterized LOC100847622 (LOC100847622), 0.0 1319 100.00 0.998632010943912 XM_005246660.1 INO80D PREDICTED: Homo sapiens INO80 complex subunit D (INO80D), 2e-108 396 99.11 0.305061559507524 0 noncoding CAGAGTGAGAGGCGCTGGCAATGGACTAGGAAGCTCGGCTGCCGCTGCTACTGCTCCCCCCTGGGCTCCAGCGAGAGCCTTTCCCTGTCAAGCAAGAGGGGTGAGGATCATATTTTTATTTTGGAAACTAAAAAGTGCTCCCAGGGTCGGTGATTATTAAGGGGAAATCCCTGAATATACTCTCCAGCCAAGAAGGCAGGGCTGCCGGGGCTGCACAAGAAGAGGCAGCAGCCTCCTACAGCACCACTACAGGCACTGCGAGGACATAACACCAGAGAGCCGCTCCTCTGCCCTCCGAAACGACAACTTTCCTACCATCTTGGAGGCAGAGCAAAGGGGGGCCAGGGGGAAAAGTGCACCCGCTCCCGATAAAGTACAAATTTATGCTTCTCATCTCTGGAAAAAAGTCCACACCGGCCGTCTCCACCGGCGCCTGGGGGAGAAAGCGGGGAAGAAACTGGGGGTGCCTCAGAAACGTTTGCGTTTACTCCAGGGGGGAAAATGTTTCTGCATCTTCTGATGGAAAGAAATCTTTACAAGACACAGGTTTTCCGATTTAAGTTCTGGGTTTGATGGTCATTTTATAAATTTGAACTTCAAGATACTTCCTAGCCACTTTATTTGTCTGCTTATTTATACGTTTTTGTGTATAGAGATATTTCTTTCCTTATATATATAAATTTATGCTATATATTCCCTTCCAAACTGAGATTGCTGGACGACAATTTTAA EMBV3_36609 TCATTCTTACCCGGGAGTGGGAGGCCGGAAAGGTCGCAGCAAGAGAGAAGCCGCCATCAA Gene GeneID:614673|NUPR1:NM_001114515:398_cdna Constitutive 0 NULL GeneID:614673 25 GENE NUPR1 MGC128797 nuclear protein, transcriptional regulator, 1 EMBV3_23206 GAACCGGCAGATTCCTAAGCCTGTGGCACCGAGACTGACTAGTGTTTCCATTTGCACACT Gene GeneID:506728|ZDHHC3:NM_001075278:89_cdna Constitutive 1 NULL GeneID:506728 22 GENE ZDHHC3 MGC140627 zinc finger, DHHC-type containing 3 EMBV3_28982 AGACAAACTGTGGCTTCTGAAAGACCGAAATTTAGCACGGGAGAAAGAGCAAGAGCGGAG Gene GeneID:523971|BRDT:NM_001075852:150_cdna Constitutive 0 NULL GeneID:523971 3 GENE BRDT MGC151933 bromodomain, testis-specific EMBV3_01644 TCAGAATGAAGGCGGAATTCACTAGGACGCCCCTGTGCAAATGGACCCTCGAATGTCAGA Gene BVV0102_133008 - 0 NULL GK000011.2:96208796-96278652 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028925 TCONS_00028922 TCONS_00028926 TCONS_00028929 TCONS_00028934 TCONS_00028932 TCONS_00028923 TCONS_00028924 TCONS_00028933 TCONS_00028930 TCONS_00028928 TCONS_00028931 TCONS_00028927 1 XLOC_015622 Coding TCONS_00028929 XLOC_015622 Coding Coding MAPKAP1 11:96277610-96511558 = TSS20230 3335 1 TCONS_00028929_2 522 12 0.98579592813757 0.000802416705397426 0.00202438538807922 0.00298299659582673 0.00101687898458002 0.00126661297149929 0.000711513728003526 1.52240800851095e-08 6.60901100417897e-08 0.00051664350632701 7.60082718748547e-05 6.10837320871927e-09 5.25596059903413e-97 2.0808990583464e-10 1.35519861264744e-07 4.87173326759516e-05 3.81598420059841e-59 1.27976567031285e-08 5.14830121515991e-30 0.000212954393905079 0.000661684822091458 2.03680044338592e-14 4.00322699362889e-22 4.73775724000826e-70 3.96347007618877e-54 0.000759685093037139 0.00126411281614521 0.000545905642533599 1.57696348980713e-14 3.26748586873946e-20 7.85637474772829e-05 XM_005213140.1 MAPKAP1 PREDICTED: Bos taurus mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant X1, mRNA. 0.0 5519 100.00 0.917241379310345 NM_001006617.1 MAPKAP1 Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 1, mRNA. 0.0 3404 89.93 0.760419790104948 TCONS_00028929_2 sp|A2VDU2|SIN1_BOVIN SIN1_BOVIN Target of rapamycin complex 2 subunit MAPKAP1; 0.0 1087 100.00 0.998084291187739 1 coding 1 1 1 0 -0.0796723525672937 0.62628079911404 -0.014647050485933 0.816113122232706 GCGGCTCGGGGCAACAGGGCTGCTGCTCGGCCGGCCAGCGGCAGCGAGCGGCGGGGGTATGAGGGCGAGCCCGGAAAGCGGCTGCTGAGCCGGCCGGGAGGAGCGTCAGTCCTTGAGGATTCCGAGAGTGCGGAGCTGGGGCAGGGACCGGGGGGCGCGGGGGAGCCGGGCCCTCCCCCCAGGAACGTGTCCCAGGGCCATCCCGGCCCGTAGTGTGGCAGCAGCTTCAGGTAGTTGAGCCCGTGAAACAATATGAAGAGGAGAAAATAGCCTTTTAAGGAAATTGGCCCACAGAAAGGATGGCCTTCTTGGACAATCCAACTATCATTCTAGCTCATATTCGACAGTCACATGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCTCATTGATCATGATGTTGACCTAGAGAAGATTCATCCTCCTTCAATGCCTGGAGACAGTGGGTCAGAAATTCAGGGAAGCAATGGTGAGACTCAGGGCTATGTGTACGCCCAGTCGGTCGATATTACCTCAAGTTGGGACTTTGGTATTAGAAGACGCTCAAATACAGCTCAAAGATTAGAACGACTCCGAAAAGAGAGACAAAACCAGATCAAATGCAAAAATATTCAGTGGAAAGAAAGAAATTCTAAGCAATCAGCCCAGGAGTTAAAGTCACTGTTTGAAAAAAAGTCCCTCAAAGAGAAACCTCCAAATTCTGGGAAGCAGTCTATATTATCTGTACGCCTGGAGCAGTGCCCCCTGCAGCTGAATAATCCCTTTAACGAGTACTCCAAATTTGATGGCAAGGGTCACGTAGGCACAACAGCGACCAAGAAGATCGATGTCTACCTCCCCCTGCACTCGAGCCAGGACAGACTGCTGCCAATGACGGTGGTGACCATGGCCAGCGCCAGGGTGCAGGACCTCATCGGGCTCATCTGCTGGCAGTACACCAGCGAAGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGCCTACTGCCTGCATATTGCCGAGGATGACGGGGAGGTTGACACAGACTTTCCCCCACTGGATTCCAACGAGCCCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGGTTGAAAAGTATTCATCTCCTGGTCTGACATCCAAAGAGTCGCTCTTTGTTCGAATAAATGCTGCTCATGGATTCTCCCTTATTCAGGTGGACAACACAAAGGTCACCATGAAAGAAATCTTGCTAAAGGCAGTGAAGCGAAGAAAAGGATCCCAGAAAATTTCAGGCCCTCAGTACCGCCTGGAGAAGCAGAGCGAGCCCAACGTCGCCGTGGACCTGGAGAGCACCTTGGAGAGCCAGAGCGCCTGGGAGTTCTGCCTGGTCCGCGAGAACAGTTCAAGGGCAGACGGGGTTTTTGAGGAGGATTCGCAGATTGACATAGCTACAGTACAGGATATGTTGAGCAGCCACCACTACAAGTCATTTAAAGTCAGCATGATCCACAGACTCCGCTTCACAACCGACGTCCAGTTAGGTATCTCTGGAGACAAAGTGGAGATAGACCCTGTCACGAGTCAGAAAGCCAGCACCAAGTTCTGGATTAAGCAGAAGCCCATCTCGATCGATTCTGACCTGCTCTGTGCCTGTGACCTTGCAGAAGAAAAAAGCCCCAGTCACGCAATATTTAAACTCACGTATCTAAGCAATCACGACTATAAACACCTCTACTTCGAATCTGACGCCGCTACCGTCAATGAAATCGTGCTCAAGGTTAACTACATACTGGAATCGCGAGCAAGCACTGCCCGGGCTGACTATTTCGCTCAAAAACAAAGAAAACTGAACAGACGTACAAGCTTCAGCTTCCAGAAGGAAAAGAAATCAGGGCAGCAGTGACGGCGTTCTCCAGCTTCAGTCTGCTGCCGGAGCTCAGAGCTGCCTGCTGGGCCAGGTGGCTCTCGCCCATCCTGTGCCCTGCGGTCCTCGGGGGGGCCAGGCTCCCGGCTCACGGGGACAGGGCTGGTGGGCTCCAGGGGAAGGGGGGGCACCCCCTCGGACAGAGCTGGGGACGTTTCCACGGGACCGAAGCCTGAGTGACAGCGGCTTCGACGAGCAGTGCCCGGGGCCGGACGACACGGCACGGAGCCATGAGAGGCTCCGCCATCTTCACTGCCTGATGGCCCCGCGCGAGGATGTACATAGCTGCGCCCAGACGTGTCCTTGCAGCTTGATCAAATTTCCTAAAACAAGCAAAGAACAAAAGTGTACATTTCTGTTTTTTTTTCTTCTTCCTTTTAATAAACTCTTTATCATGGTTGGTATGACGGACCATTCTTTGGGGCAGGATTGATTATGTTATTCTCTTTAAAATCTGCTCCCCATATTGAACAGGCAGATTGGAAAAGCTATGGCTCGATTTTTCAGAAGAAATGTTTAGGGTTTAGTCAATAGTTTTAACTATGCCATTTGTTTAAATGAGCGTGTTGCTCTGAGGATAGCATCTTACTGAAGTTCGGGAGGGGACGTAGTGATGTGTGTCCAGGGCTGCGCCACCCACCCCTTCAGAAGCCTTCTCTCCTCAGCTTCTCCAGCACCTCTGACTTCAGGAAGGCAGGGCTGCACGTCAAGCTCGGGGCGCGGGGAAACGGGGGTCACGCCGAGCTGCTGTTTCCTCAGTAGCCAGGCTGAGTTTGAGCCGACGGTCAGACCCGCACGTGGGCTTGCCCTGGACTCTGAAGACTCTTCTCTCTTCACAATGCCTGCCCCCTGGTCTCAGCGGCAGGAAAGCCACTGCTTTCACTTCATTGGAGGCCTCGGTGTGGGGGAGCTGCTGCCAGAGGTCCCACTCCCGGGGGTGGGGGCAAGGGAACGGGCGTCTGCTGACACCCACCTCTCAGGCCAGCCTGCTGCCTCGGTGGTCCCTCCCAGGGTGACGTCCGTTCGCTCAGTCCCCAGCCAGGGTGGCAGGACCGAGGTTTCACCGAGGAACTGCATTTCAAAAATATTTTTTTTTAACTGTCGAACAGGAAGCGACATGGCTGAAACAGCCTCTGACATTCGAGGGTCCATTTGCACAGGGGCGTCCTAGTGAATTCCGCCTTCATTCTGATATTTGTTCAGCCAACAGAAGCACCCTTTTCTAATGTCTTCCATTGCTACCCACCCCAGAAACAAAAGAAATATTATTTGTAGCTTGCTATCTGTATTTGAATTTTTAGCAATTTTATATTTAGATATCTTTGAAAAATATAAATGACTAATTTGGTCATTAAATCTTGTGACATATTCAATATTAAAATAAAAGTCATAAACACCTTCTTCTGCGTATTGCTTTGAATTCTTGAAGTCTCGAGCACATGTTGG EMBV3_15388 CATTGAGCTGGAGCAGCAGTTTGACTTCTTGAAGGACCTGGTGGCATCTGTGCCTGACAT Gene GeneID:540345|DRAP1:NM_001076214:89_cdna Constitutive 1 NULL GeneID:540345 29 GENE DRAP1 MGC134551 DR1-associated protein 1 (negative cofactor 2 alpha) EMBV3_40960 TGCCTAGGGGTAGGACTGCTGGATCATATGGTAGTTCTATTTTTAGTTTAAGGGACCTCC Gene GeneID:538808|KIF7:XM_002696575:193_cdna Constitutive 0 NULL GeneID:538808 21 GENE KIF7 NULL kinesin family member 7 EMBV3_04699 CACTTGTTTTCCCATAGCCTTGTCATTACAGCATACAGTCCAGTTTTTTGGGTTTTTGCC Gene BVV0102_438917 + 1 EMBV3_11004 GK000012.2:28488432-28544048 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00039021 1 XLOC_022841 NonCoding TCONS_00039021 XLOC_022841 NonCoding NonCoding - 12:28504237-28505847 - TSS28522 1610 5 TCONS_00039021_2 57 0.717391304347826 1 0 0 0 0 1.03157193605548e-05 0 0 0 0 0 4.25931286021323e-07 1.4218529312684e-06 1.33255469745013e-05 0 0.000154851624013297 0 0.00104990167647648 9.37451841044303e-07 0.000677921281541434 0 0 0 0 1.13963265229251e-06 1.04128210792539e-05 0 0 0 7.15914062948142e-05 8.14125891620342e-05 0 XR_083420.2 LOC510382 PREDICTED: Bos taurus guanylate-binding protein 6-like (LOC510382), 9e-61 239 92.12 0.101863354037267 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 1e-15 89.7 76.61 0.0763975155279503 0 noncoding 0 0 0 0 -0.054027769137025 0.747267887071388 -0.00465931471113454 0.921038468472955 CTTTGGCCCGTTTTTTGATTGGGTCATTTATTTTTCTGGAATTGAGCTGTAGGAGTTGCTTGTATATTTTTGAGATTAGTTGTTTGTCAGTTGCTTCATTTGCTATTATTTTCTCCCATTCTGAAGGCTGTCTTTTCACCTTGCTAATAGTTTCCTTTGTTGTGCATTAAACCAACAATTCCAATCCTAGGTATTGACTCAAGAAAAATAAAAACATGTTTGCAAAAAGATCCATACAGGCCTTATTCTTAAAAATGAAAAAACTGAAAATAACTCAAATACCCATCAACAGAAGAAAAAATAAGCTTGACACATTCATCCAATGGCATACTACTCAGCAATAAAAAGGACTCTGACACATCCACCCTCACAGATGCGTCTGGAAATATATGTTAAACAAACAAAGCTAGATACCAGAAAAGAAGACACTGTACGAAGACCAAACAAAATACCTACAATGTTAGAATTCAGAGTTTTTGGGGGAGAGGGGAACTGAATGCAAAGGGTAACCAGTGAACTTTCTGGGGAGAGATGAGAATGCTTTATCATCCTTTGGTTACCAGTTAAATGAGTACAACTGTCACACCTAAAAGTCACATCTAAAACAACTAAGGTCTGTACATTTTATTGTATTTAATAAATATCTCAATGTAAAAATTAAATTTTTAAATAAATGAGTTCATAGTATTAATTTTCCTTTTTTTTCCTTTGTCCTGGGTTGTCTACATGTAGTGTATGTATACATGTATCAATGGGTTCTCGGTAATTATCTCTCATCATCTATGTGCCAAACACTAGGCTAGGTTCCATAAGTCCGTAAGTTCATGCCCTCAAGAGGGTAACAATCTAGGGCAAAGAAATACACACCTAGTAACAGTACACAATGCGAGGGTTTCCATTATAAGGGTATACACAGGGGCCTGAGCGAAGACTCAGGCGACAGAAAAGCCTCTTCATTGGAGAATGACAAGCGCCAACTGTGGACATGTAGACAAGCAGGAACGGACCATCATAAACAGAGAAATACCCCACGCAAAGACACAGACAAAGGGTCGAACTCGACAAGGAGCTAGGAGCAGTCCAGTGTTCTGGGAGCTGGAGAAGCTATGAGGTGCCATCCTAACGCTACGGCCCTTGGGCTATGGAGCCAGTGAAGAGCCACTTGACAGTTTTAAGCAAGGGAATGATGCTTTCAAATTTGCAATTAGAAGTATCACTTTGCTAACAGTGAGAATGACAGAAAGCCTAGAAGGGAGTAAAAATGGAAGCAATCTGTCAGAGGACAACTGCAACAAGCAAGTTGTTTCCTTTTAAAAATTCAACCAAGGCACATGAACTGAAGAGAAATTGAAGAATCCCCAAAATGGACAGGAAAATGACTAAAGATTCAGATCAGACAGTTCACAGAGAAAAAAAATGAAGCTCAAAATGGCCCAAACAAATGAACGGATGCTCAACTTCACTCACAAGAAATGTAAAAAATGAAAGCTACACTGAGGTATCGTTTTTCACCTATTATACTGGCAAAAACCCAAAAAACTGGACTGTATGCTGTAATGACAAGGCTATGGGAAAACAAGTGTTCTCACACATACATTATTGTTTCAACC TCONS_00036611 . 5' 29859 TCONS_00036611 . 5' 29859 EMBV3_22817 GTATTTTTCACTCCTGAGAGAGCAAGTTGGCATTCTTAAGTCCGTGTGCCAGAACTGCAC Gene GeneID:504256|CLGN:NM_001034205:11_cdna Constitutive 2 NULL GeneID:504256 17 GENE CLGN MGC127998 calmegin EMBV3_29627 AGGACAAAATTGGAGTCCGGAAGTGCCAGAAGTAAAACCCACCAGCTGCCCAGAGAAAAG Gene GeneID:512099|TBC1D16:XM_002696151:78_cdna Constitutive 1 NULL GeneID:512099 19 GENE TBC1D16 NULL TBC1 domain family, member 16 EMBV3_22499 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTATGACC Gene GeneID:100296541|LOC100296541:XM_002700110:255_cdna Constitutive 0 NULL GeneID:100296541 X GENE LOC100296541 NULL similar to histone cluster 1, H2bd EMBV3_41029 GAACTGATGCTCTAATGAGAAGCAGAGCTGATCTATCTTTGGCCACTGGATCCTCAATTA Gene BVV0102_087381 + 0 NULL GK000007.2:8805449-8873865 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218822 1 XLOC_132141 NonCoding TCONS_00218822 XLOC_132141 NonCoding NonCoding - 7:8827043-8831546 - TSS162820 4503 2 TCONS_00218822_14 111 0.24206084832334 1 0 0 0 0 1.84413172382968e-06 0 0 1.17733565713808e-07 0 7.00877987950367e-06 9.95957155176126e-05 5.03285673611265e-05 0 4.84268969909461e-05 0 7.14485508881148e-05 0.00169508041773886 0.000549352611107168 0.00036218250148972 0 3.19405433082348e-07 0 4.83395329401097e-05 0.000162985450932712 0.000174980748318776 0 6.25846954809525e-06 0 6.39918578355287e-06 6.36066883903569e-05 0.000186923333102508 XM_005199626.1 KIAA2018 PREDICTED: Bos taurus KIAA2018 ortholog (KIAA2018), transcript 8e-143 513 87.08 0.0926049300466356 0 noncoding 0 0 0 0 AGAAAGTAATTCTTGTTTCGGGTCTTGTTTTTCAAACTCTGGATTATGAAATGAATTTAGTAGGTTGCAATCATTGTTTAAGGGGGGAGAAAAAGGAAATGTCAAAGGGTGTTACACATTCAAGGGTATTTCATAAAACATTTGCTGTGATTCTGTGTATTGTGTACACGGCGAAATCTGTTTCCTATTGTGAATCTTTTCAGACTAGTATGAAATAGCCTTGTTTTAGATACCACTTATTGTTAACTGTGGGTACCTTGAATTTTTTTTTCTTTCTTTTTTTGGTGGTTATTTTACAATCTATTTCTTTATCATTTGCCCAAGGTGATTATTCTGGATATGCTTTCTAGTAGCATGTGAACTGCATTGATCTTTAGTTTCTTTTCTTCCTTGTGCTGTGCCTGCTAGAAGCTCTTTGGAGGGTAGAGTGGGATGGGGAAGTTGAGGAGGAAGCATGTGGGGAAGGCTGTCAGCAGATTGCAACAAGCAAAACAGTAAGTATGTAAAGAGTATTTTGTGTATGTGTTGGGGGGGGCAAGTTATTTTTGCTCTTGAGATAGTGTCCTCCCAACTTTTTAATCAAGAAAGATGTTAGTTCTAAAGGAAATGGCTATATTGGTTACTTACTTATGGTATCAATAACAAACATGAAACAAAAGGGGATTTGTTGAAACAAAATGGAATTTGCTGGTTGATGTAGTAGGTCTAGAGTGGACCTCAGGCACAGCTGAAATCAGGGACTCAAATAGGGACATCAGAGCTGTTTTTTATCTCTAATATCCTGACTTCAAGGTCAAGAATGATTCTTCCCCAGTAGTGCTCTGATGACAGAAGACACTGGCTTGGATCATTGCCCATCCCTGACCATGTTCAGAGTGGGAATGCCAAGCCACCTCACTCTAACATAACACATTGATTCATCTCTGCCCTCCACTTGCTTACCTCCAGTGGTGACCCCAGCAGCATCTTGCTCCTCATTGTGAGCCATGCTAGATGGGATATTTTTCTTGAACAGTCTACATTTTATGTTTGAAGTAGAGTGTATCCCCTATTTTGAAGCAATAAATTTTGGTTGGCTGAAGGGAAGTTAATTTTCCATACTTGGTAATAAAAAACCAGAATTAGCTGCAATTAGCTTATAACGAGTTACTCAAGAAAAAGGATAAAGTGAAGATAGTTAAGGATGTGGGTATTCCAAATCCTTGGTCCAGAATTAAATGAAAGACATGATTTATACCAGGTTCAGGTACAGAGGAATTTGCTATGGGGACTCAGGGAGGAGTCAAGCCAAGTCTCAGTAGTCTCTTGGGTGGGCAAGAAGACTCCAGCCGCTGGTGATAGAGCCTAATTTGATCAGTAAACAGCCCTCAGAAAGCACAGGGGTGAGATAGGCTTATAACATGGAAGGAAGTGCAGGGGAAGACTGGGTTAATAGACCAGGTAGGTAAACATCAGCATATGCATTCATGAATGAAATTGTAATGGAGAATATTTCAGTAGACTGGATCATCTTTGTCCACACAAAAACTACATTTGTAATTTTGCCATTTGTTAAGCTGTTTCTATACTTAAATTCTTGTAAAGTCTGCTGCTTGGCATTCCTCTAGTATTACAGAAAGCTTACTCAGATTTCCATAATCAAAAACAAGTGTTAAACATTGCTAGAGTAATCATCTTCCTACAGTTCTTTCTGTTGGATTTATTCAGTTCTTTAAGGAACTCAAAATAATTGAGGATCCAGTGGCCAAAGATAGATCAGCTCTGCTTCTCATTAGAGCATCAGTTCTTAACTTAAGGGGAGGTTGGAGGTCCCTTTGAAAAGGTGACAAAGCTGTGGATCCTTTCTCCAGAAAAATGCGTATGTGTGAACATTGAATAGTTAGGGGTAGAGGCATTTCTTAGAACCCTAGAGCCCATCCAAGAAGCATGTACTAAAATGAATTTCCTGGAGTTTACTTTGAGAATGAGAAATTATTATGTTATTAAATGACCCTTGATGATTTTGAAGACTTTTGTTTTTGCATGTATCCTGCTTTTCCAAACATTTGCAATTTTTATGACCCTAGGAAACAATGTGGAGCACCCATTTTGGTTTATCCTTGTGGAAAACCCTCCAGAGACTTTCTCAGAGCTGTCAACCTGTGTCAGCTTTGGTGCAGATCTGCCCAGGAGCCTTCTACACCCCTCTTTTTCAACTTGCTCTCTTTGTTGGGTATGAGGAATGTCTCAAAATGCCAGACTGGGCCTATTGCAGTGGCTGCAGATGAAGGAAGGTTTTTGTTCTAGGGCTCTTCGCTGAAGCAACTTCTGCTGTTCATAAAACTGTTTTCCAGGATTTGGTGTTGGCTTGGAGGCTTTGCTGCAGAAGGGAATCCAGTGGCCTGCTAGCTAGCCTGATCATTTGGTCGTGCTGCGTATGGATAGACTTAGAAAGACTCGTGGCTGTGGTCCCTTCTGTGTCTTAGTGCTTGCTCTTAGCTGTGAGACCTTTTTTCCATGCTTGCATTTGAACCTTCAGACTGAGGGAGAACTTGTGGGATGAGAAAATAACCATTCTTCAGCGTGATATGTTTGTGCTTAGGGATTGAAGCATGCTGCACAGGTGGTGTGCATGATACCATTCTTCTCTCTTCCAAATCCTTTGTCTGGTACAAGGAAGGGGAAACTCAGTGTTATTAACTTGAATAATTCATGCTTTGTAATTGGGGCAGAGTTGTCAAAGGATGGAAAATAACTTGTATTACTTCTAGGAATAGTGCATGTTGTTTTAAAAATTCAGTGGAGTAAATTTTAAGATCTTAGTGACTTTCTTCAGTGATTTGTGAATGGAACAGCATTCTATCTAGCAGATACACGGAGCTGTACAGAGGAAAGACAGAGTGCGGTGGGGGAAACTAAGCTGTCAAAAAACAGATTGCTTGTGGCAAGGTCACTTTCTTTTTAGGGATGGCAGGGGTCTGTCAGGCAGATTACCTCACTAGTGCTGACCAGGTGATTCCTGATTGACTGGTTTTAAGATTCCATTTCTGGGAGAGCTGAAATGAATTAACCTGTGGTTTGTTGACATGGGGCTCATTTTGGGCCTGTTGTCCTATTTTTAACAATATCAAAACCTCTTTGCTCTCCCCTAATCTCTAAAGTTTGAATTAAATTTATATGTGCTAATGGATATTTCCCCCGTTCATTTTCTGCTGGTCTTTGGCTATAATGCATTCCTTTGCTCTGCCCAGTTGAGTTACAGTCTTATGTATTGTACACACATGGCTTTGTTGCTTAAACAGGTTGCTCTTTTTATTCTGTAAATAAAAGAAATAAACATAACTTATATGAAGGAGTTTTATAAGAGGTAGTATCATCCATGTGTAGGTTGTTTTCATTCATAATCTTCATTTAAAGTTATTTAGCTTTGAAATGCTTTCAGTTATATATATTAAAAAAAAATGGCTAAGTAGTGAAGTTTGCATATTTGTGTCTTCATTTTCCTTTTGATTCCAGGAAACTATTGAGCTCACAGATGAGTTGTTTGGAAATAACACCACCTTCATGTTCGTCCACCTTCATGTTCGTCTGTTTCAAGATAATAGCTCGCATATATTTGTAATCCCAGGAGTGCAGTTTTGAGTTCTTCACATTGGAGCTGATAGCCTGCATCTTAGCTTGCCTGTCCTCAGTGTCATTTCTCAGGACGCCTGTGGGCCTCTTTGCTCTGGGAGCCCATCTGAGTACCCTTCCCTTACACTTGGGAGAGCTGGGTTCCTCCTTTGGCCTGTGCCTCTTTAAACACCCCCGCCCCCCAATTGTTCACCTTGAGACAGTTGCTTGTCTTTGATCATTGACTCTTTGTGAAAAGGATTTCTAGCAAGTAGTTGCCTATGAACAGATTTCCCTTCAAAGGGTAGAAATACCTTTTCTGAATAGGTCCTTTTTTGTTTCTTGTTGTTTAGTTACCAAGTCGTGTCCAACTCTTGCGACCCAATAGACTGTAGCCCACCAGGCTCCTCTGTCCGTGGGGTTTTCCAGGCAAAAATAATGGAGTGGGTTGCCTTTTTTTTGTTTCTTCAGTTCAGTCATGTCTGACTCTTTGCGACCCCATGGACGGCAGCATGCCAGGCTTCCTTGTCCATCACCAACTCCCAGATCGTACTCAAACTCGTGTCCATCGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTTGGCCCCTTCTCCTCCTGCCTTCAATCTTTTCCAGCATCAGAGTCTTTTCTAGCGAGTCCATTCTTCGCATCAGGTGGCCAAAGTATTGGAGTTTCAACTTCAGCATCAGTCCTTCCAATGAACATTCAGGACTAGTTTCCTTTAGGATACAGTGGTTGGATCTTCTTGCGGTCCAAGCGACTCTCAAGAGTCTTTTCCAACACTACAGTTCAAAAGCATCAGTTCTTCGGCGCTCAGCTTTCATCATAGTCCAACTCTCACATCCATACTGGAAAAATGACTACTGGAAAAACCACATGACTACT TCONS_00211709 TCONS_00211710 . 3' 2270 TCONS_00211709 TCONS_00211710 . 3' 6772 EMBV3_24049 AGACTTCAGTGGGTGCTCCTGGATCTTGGATGCCCTGAGAGTGCTGGAGGATTGGCAGCT Gene GeneID:100139041|LOC100139041:XM_002695657:124_cdna Constitutive 0 NULL GeneID:100139041 19 GENE LOC100139041 NULL similar to myosin ID EMBV3_18532 GAAACAATTTTCCATCTTCTAAACAAGAAATGGTCTCAAGTATGCCAAAAGAGACCACCC Gene BVV0102_084576 + 0 NULL GK000028.2:19676099-19709520 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07336 AGGGACTGACTGCTGTCAGCTCTGAGCTGGGGTTCTGCAAGCACTTGTGTGTCTGAAGGC Gene BVV0102_371830 + 0 NULL GJ060143.1:1-18302 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17964 TTGGCAATGGCCTGGATTTGATGAGTGGATTGTATATTGCTGACTCCTGTCCTAAAGTTT Gene BVV0102_175060 + 0 NULL GK000004.2:103719751-103731804 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12302 TGCTGAAACTGCGCTTTGGCGAGGCCCCGATGCACTTCTGTGAGGTCATGCTCAAGGACA Gene GeneID:100336564|LOC100336564:XM_002691701:50_cdna Constitutive 0 NULL GeneID:100336564 11 GENE LOC100336564 NULL anaphase-promoting complex subunit 2-like EMBV3_38359 GGATGGAAGAGGTTTCTAAGGTTTACTACATTTAGTCAGTTAACTGTGTTCACTCAATGA Gene GeneID:539923|ZNF644:NM_001082613:183_cdna Constitutive 2 NULL GeneID:539923 3 GENE ZNF644 MGC152168 zinc finger protein 644 EMBV3_06493 CCATAGTGTATCTGGGAGGCAGTGGGGCAGAGAAAGGAGGTGAGTGCTAATTTAAGAAGG Gene BVT0102_084429 + 0 NULL GK000020.2:41443325-41491222 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115102 TCONS_00113957 TCONS_00113961 TCONS_00113967 TCONS_00113962 TCONS_00113966 TCONS_00113963 TCONS_00113968 TCONS_00113955 TCONS_00113956 TCONS_00113958 TCONS_00113964 TCONS_00113954 TCONS_00113959 TCONS_00113965 2 XLOC_069434 XLOC_069147 Coding TCONS_00115102 XLOC_069434 NonCoding NonCoding - 20:41443513-41445387 - TSS85682 1419 1 TCONS_00115102_1 99 2 0.243459690336359 0.00974297520513469 0.00627121513465312 0.00628665477762635 0.0075247037625113 0.0127312727417398 0.00341736344619833 0.00566964295714144 0.00840047268381599 0.0113123360248044 0.00211613323333004 4.454713192171e-05 0.000213659474432472 0.000976108587511875 0.00235275067892647 0.00264080294650177 0.0301642660775952 0.0129523150529805 0.0145341769606129 0.00931341903027475 0.00820549759024361 0.00411381888210398 0.00244608719699546 0.00388495703293767 0.00653471333253679 0.00442953991933708 0.00612983881383292 0.00220587597453973 0.000277567053795508 0.000560232332881077 1.75895747057867e-66 XM_614802.5 MTMR12 PREDICTED: Bos taurus myotubularin related protein 12 (MTMR12), 0.0 1472 100.00 0.574348132487667 XM_005248313.1 MTMR12 PREDICTED: Homo sapiens myotubularin related protein 12 (MTMR12), 0.0 942 85.61 0.569415081042988 0 noncoding 0 0 0 0 -0.0450723455954399 0.714297248994561 -0.0158128180452875 0.859716203750867 ATACAGTATTGTAAATTGTGCTTTAATTTCTGCAATCAGATACGATGCAGTGAAATACAAGTATAAACTTTCATTGTACATCCAGAAAATAAAAAGCACATTTATACAGATTTAGCCCAACAGCTTATTCCCTTTAAAAAAAAAAGTTTCTAATGTAATTAAAGCTAATTTATCTTCAGTGTAAAAACTTGGAGGTATAAACAAACTCAAGATATTATATACAGGAAATTAATATACATTTCCAAACGTGCACAGTGCAGCATTTTAGACAAAGTAAATGATCTCATTTTAGCTTTTACTGTTAACCATAATCCATATCTCAATCTTGAATAAAAATGTCACAATATATAAATCCACTGAGAATTCTGTACACAAATACAAGTTTATAGAAATCTCATTTCAGATATAAATACATAAACTGTCATGACCTTACATGTTAAAACAGCTTATTTTTCTATTGTAATTTTATTTTAAAAAAATCATAGAAAAATATTTCAATGCACATTCAACTGCTATGAGAGGGGCCATGACCTTGTGCCTTTAAACCATACTTTATGGATGTAAAGCATCACACTGGGCATTTTTGGAATGAAAATTACTAAGATCTTAAGACTGAAGAGGCTACTGTAGAAATATTCCCATTATAATATGATCACAAAACTAGTTAACTCCATAGTGTATCTGGGAGGCAGTGGGGCAGAGAAAGGAGGTGAGTGCTAATTTAAGAAGGCCCACAGAACATAGCCAATGAATTAGGGTCATTTTAAAGTCCCCACTGCAAGCCTACACTGACCTTACTAGTGAGACTCTTAAGGCATAGTCAAGTTTCTTCTATGGCTTTTTAAATCGCTGAGGTACTATGTGGTCACCATCACTTCTGAGACTTATGCTTAACCGCTTCCCTATGATAGCCGCGTTCGACAGTGACCTTCTTCCCCGGTCTGCAAGGTAGCGAAACTGGGGAAACGCCTGAGGACTGCGGTCACAGATGCTCCGAAGCCTCGGCGTGCTGTTGGAAAAAGGTGAAGCAGCCTCTTTCAAACACTGCGTGCCTCCGGGAGAATGGAGGCTCCTCAGGGCAAACCTAAGAGATTCCCCCAGTTTGACCCACAGGCTTAGCAGCAAAAAGATCCCAGGACGAGGTACACCAAGGCAGGGATTGCAAAGGGACAGTGGAAAGCGGTGCACAGCCGGTGGCGAGCGGCGGGGAGCCTGGAGCTGTCGGCCGCGAGCCAGCCCCCTGCCCCGACATAAAGTGACACAGTCTGAGGATGGTCGGAAACATTAGGATGGTGACACGCATGGCAAGAGGACACAGGAAAACTGCTACGGTTTGGAAATGAAGGCCACACATCTTAACACCGCTATCTGAATCTGTTAATCCAACACACACACACACACACACACACACACACACAC TCONS_00113968 TCONS_00113968 r 5' 0 TCONS_00113968 TCONS_00113968 r 5' 0 EMBV3_34022 AGAATCAGTCGCAGGTGGACCAAGAGCTGCGAACCTACATGAACCCGGATGAAAGCCTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18581 CTGCCTGCCCGTCGTCACGCCCGAAACCGGTGCTAGAAGAGGAACCAGTGGCATCTAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10780 GCTGCATCTACTCAGACCCCAAGAGTTTTTCTGTTTCCATTTTTCCAGAGCAGACTGTGG Gene GeneID:282495|BOLA-DQB:NM_001012676:17_cdna Constitutive 0 NULL GeneID:282495 23 GENE BOLA-DQB NULL major histocompatibility complex, class II, DQ beta EMBV3_13783 CCAAGGAGTGGCTAGCGAGCACATGAAGAGGTGGTGGTGAATGGGACTCCCTTCTATGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30557 GCACCCTGGAGGCTTCCACCCACACGAGTCGTAGGAGAGTTAATACTGTAAAGAAACTTC Gene GeneID:785799|ZNF7:XM_002692579:289_cdna Constitutive 0 NULL GeneID:785799 14 GENE ZNF7 NULL zinc finger protein 7 EMBV3_38084 GGGTCCCCAAAGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTTT Gene BVT0102_076879 + 0 NULL GK000029.2:26159883-26201522 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00118490 TCONS_00012285 TCONS_00059696 TCONS_00165977 TCONS_00118456 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00233473 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00173459 TCONS_00072261 TCONS_00055707 TCONS_00082022 TCONS_00205117 TCONS_00204211 TCONS_00174806 TCONS_00031972 TCONS_00059695 TCONS_00161822 TCONS_00118487 TCONS_00232824 TCONS_00251680 TCONS_00036106 TCONS_00229794 TCONS_00031759 TCONS_00000529 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00220566 TCONS_00061487 TCONS_00118040 TCONS_00239997 TCONS_00019195 TCONS_00010963 TCONS_00124524 TCONS_00216950 TCONS_00061490 TCONS_00123823 TCONS_00110449 TCONS_00174809 TCONS_00061485 TCONS_00242064 TCONS_00162767 TCONS_00018601 TCONS_00022895 TCONS_00107436 TCONS_00065412 TCONS_00010280 TCONS_00061489 TCONS_00125692 TCONS_00027918 TCONS_00118489 TCONS_00173458 TCONS_00092545 TCONS_00006385 TCONS_00006741 TCONS_00007850 TCONS_00197281 TCONS_00001865 TCONS_00166913 TCONS_00238581 TCONS_00036105 TCONS_00129710 TCONS_00198907 TCONS_00040981 TCONS_00061482 TCONS_00125637 TCONS_00219592 TCONS_00031886 TCONS_00246739 TCONS_00234240 TCONS_00087729 TCONS_00196823 TCONS_00174808 TCONS_00223565 TCONS_00118491 TCONS_00251851 TCONS_00132067 TCONS_00082029 TCONS_00145750 TCONS_00174805 TCONS_00056184 TCONS_00023655 TCONS_00171428 TCONS_00207933 TCONS_00188145 TCONS_00238985 TCONS_00188520 TCONS_00160961 TCONS_00089291 TCONS_00002600 TCONS_00207485 TCONS_00099018 TCONS_00070976 TCONS_00209974 TCONS_00246740 TCONS_00251625 TCONS_00118459 TCONS_00210913 TCONS_00056144 TCONS_00204210 TCONS_00205113 TCONS_00037569 TCONS_00241019 TCONS_00001867 TCONS_00090382 TCONS_00132066 TCONS_00080713 TCONS_00092544 TCONS_00118488 TCONS_00198905 TCONS_00078426 TCONS_00087730 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00092546 TCONS_00205125 TCONS_00004603 TCONS_00228562 TCONS_00221350 TCONS_00056149 TCONS_00168038 TCONS_00001866 TCONS_00218901 TCONS_00009619 101 XLOC_105290 XLOC_072622 XLOC_072644 XLOC_007831 XLOC_036486 XLOC_100817 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_142955 XLOC_104695 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_104361 XLOC_044030 XLOC_033515 XLOC_050894 XLOC_124587 XLOC_124371 XLOC_018217 XLOC_098707 XLOC_142307 XLOC_154621 XLOC_021081 XLOC_139288 XLOC_018004 XLOC_000141 XLOC_120473 XLOC_151107 XLOC_103679 XLOC_133883 XLOC_036985 XLOC_072206 XLOC_146662 XLOC_009875 XLOC_006514 XLOC_076070 XLOC_131385 XLOC_075375 XLOC_066353 XLOC_148728 XLOC_099648 XLOC_009288 XLOC_013565 XLOC_063346 XLOC_040131 XLOC_005831 XLOC_077234 XLOC_015372 XLOC_056919 XLOC_001948 XLOC_002303 XLOC_003410 XLOC_118943 XLOC_000454 XLOC_101749 XLOC_145248 XLOC_078423 XLOC_120560 XLOC_024793 XLOC_077179 XLOC_132911 XLOC_018131 XLOC_143719 XLOC_052579 XLOC_118488 XLOC_136865 XLOC_154792 XLOC_080699 XLOC_033987 XLOC_014322 XLOC_103815 XLOC_126448 XLOC_114188 XLOC_145651 XLOC_114563 XLOC_097854 XLOC_054076 XLOC_000643 XLOC_126001 XLOC_059261 XLOC_042752 XLOC_128485 XLOC_154566 XLOC_129423 XLOC_033947 XLOC_021418 XLOC_147683 XLOC_055163 XLOC_049597 XLOC_120558 XLOC_047314 XLOC_148229 XLOC_001070 XLOC_138526 XLOC_134666 XLOC_033952 XLOC_102874 XLOC_132220 XLOC_005172 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_06063 CTTGAAGGAAGTGGGCATGACCTTTGGAGATCATATAAAGCATCCAACAAGGTGCCAAGC Gene BVT0102_396587 + 0 NULL GK000029.2:5721556-5740405 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22251 AGCTGCTTCAGCCAGGACTTCTGCATCCAGTGCAAGAGGCGGTTTTACCTGTACAAGGGA Gene GeneID:517783|RSPO4:XM_002692278:1622_cdna Constitutive 0 NULL GeneID:517783 13 GENE RSPO4 NULL R-spondin family, member 4 EMBV3_35856 CACTATTATCCCTCTGTCGTGAGTTTGAGATTTCCCCCCAGGTGTTGAAGATGCAAACCA Gene BVT0101_038361 - 1 EMBV3_39499 GK000017.2:30319496-30324841 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076941 TCONS_00076938 TCONS_00076940 TCONS_00076937 TCONS_00076939 TCONS_00076942 1 XLOC_046942 Coding TCONS_00076942 XLOC_046942 Coding Coding INTU 17:30321960-30404795 = TSS57644 5776 1 TCONS_00076942_5 933 0.0195637119113573 16 0.930463336311177 0.00038313000870605 5.94816396820036e-05 0.000102005018030255 3.38208860499871e-16 1.2607825851159e-08 1.28828934672579e-12 0.000111793585871545 9.38082666874833e-17 0.000141990386744893 9.84572528833966e-05 6.04645924937202e-06 1.2746711795096e-05 3.08016334595198e-05 5.97149526174385e-15 2.03097259306521e-19 1.45441128590501e-12 5.05532222149709e-15 1.08676075477201e-13 2.9595776486632e-07 0.000405630739413994 0.000124799892939184 0.000267906313952527 9.34519031622905e-05 0.000228492916338277 0.000313436938544589 2.87632614114373e-08 0.00011137176011944 0.000182858620581394 1.48160701701992e-05 5.496438479056e-11 NM_001205855.1 INTU Bos taurus inturned planar cell polarity effector homolog (Drosophila) (INTU), mRNA. 0.0 5054 100.00 0.484937673130194 NM_015693.3 INTU Homo sapiens inturned planar cell polarity protein (INTU), mRNA. 0.0 3878 86.40 0.557652354570637 TCONS_00076942_5 sp|F1MDL2|INTU_BOVIN INTU_BOVIN Protein inturned; 0.0 1926 100.00 0.9989281886388 0 coding 1 1 1 1 -0.0208896802781706 0.902121389711525 -0.00288202735159488 0.96760858841848 GCTCGCTTCCCGAGAGGAGGCAACATGGCGGCGCCGGCAAGCAGTAGATGCGGGGTTTGAATTACTCTGCTTTTAGCAGCGGCATCCCTGCTGATGGCGTCTCTGCCGTTGTGCGGTTCGGTTCGGAGCCCAGAGGGACTCCCTGGAGACCCTTCATCACAAGAAGATCGTCAGGATTATGATCCTGAAGATCCGGTCAGCGGCTCGGGTTCATACTCCCCTACGAGTACAGACTCTAATGACCTTGAGCCTGAATGGCTGGACAGTGTGCAGAAAAATGGAGAGCTGTTTTATTTGGAGTTGAGTGAGGATGAGGAGGAAAGCCTCCTTCCTGAAACACCTACCGTGAACCATGTCAGATTTAGTGAAAACGAGATTATTATCGAAGAAGATGATTACAGAGAAGGAAAAAAGTATGAACCCAAACTCAAGCGGTTTACCAAGATTTTAAAAAGTAAAAAACTTTTACCCAAGCGCTATAATAAAAAAAATAGTAATGCCAGCGGGCCAGTATCCATTCTAAAGCATCAGTCCAATCAGAAAATGGGAGTTATTGTCCAGCAGCGGCACAAAGATGTGAATATCTACGTAAACCCCAAAAAGCTAACGGTCACCAAAGCCAAAGAGCAGCTCAAGCTTCTGGAAGTACTTGTTGGGATTATCCATCAGACCAAGTGGAGCTGGAGAAGAACTGGAAAACAGGGCGGTGGAGAGAGGCTTGTGGTCCATGGCCTGCTGCCAGGAGGATCTGCAATGAAGAGTGGTCAGGTTTTAATTGGTGATGTCCTCGTTGCTGTGAACGACGTAGAGGTGACCTCTGAGAACATAGAGAGAGTTCTGTCTTGCATTCCTGGACCTATGCAGGTGAAACTGACATTCGAAAATGCATATGCTATGAAAAAGGAAACAACTCAACCAAGACAGAAAAAGGCACAGTTGAACACAAGTGATCTAGTCAAACTTCTGTGGGGAGAAGAGGTAGAAGGTATCCAGCAGAATATTCTAAACACTCCTCACATCGTTATGTACCTCACGCTACAGCTTGACTCGGAAACATCAAAGGAAGAGCAGGAAATCCTTTATCATTATCCAGTTTCTGAGGCATCTCAGAAACTCCAGAGTGTGAGAGGGATATTTCTCACACTCTGTGACATGTTGGAAAATGTAACTGGGACACAAGTTACGAGCTCATCCCTTCTTTTAAATAGAAAACAAATTCATATAGCTTATTGGAAAGAAACTGACAAGCTGTTGTTAATTGGCCTGCCTGCCGAGGAAGTACCTCTTCCTCAGCTAAGGAATATGATAGAAGATGTTGCCCAAACCTTAAAATTTATGTATGGTTCTTTAGACAGTGCCTTTTGCCAGGTTGAGAATGTTCCTCGTTTGGATCATTTTTTCAGCTTGTTTTTTCAAAGAGCACTTCAGCCCACTAAACTGCATTCGAGTGCCAGTCCCAGCACACAGCAGTACGATGCTTCCAGTGCAGTGCTCTTAGACAATCTCCCTGGAGTTCGGTGGCTCACACTTCCCCAGGAAATTAAGTTGGAATTAGACACAGCATTGAGTGACTTGGAGGCCGCAGACTTTGCAGAACTGTCTGAGGATTACTATGACATGAGACGGCTATATACAATTTTGGGGTCTTCTCTATTTTACAAGGGGTATTTGATATGCAGTCATTTGCCTAAGGATGATCTTATTGATATTGCTGTATACTGTCGCCACTATTGCCTACTGCCTTTGGCAGCAAAACAGAGAATTGGTCAGTTGGTAATATGGAGGGAAGTATTTCCTCGACATCACCTCCAGCCTTCTGCAGACTCAAACACTGAAGTCTTTCAGGAACCCGAAGGGAGATATTTTTTGCTAATCGTTGGCTTGAGACATTACATGTTATGTGTACTATTAGAAGCTGGAGGCTGTGCATCCAGAGCCATTGGGAATCCTGGACCAGATTGTATATATGTGGATCAGGTCAAAACAACTCTTCACCAGCTGGAAGGGGTAGATTCCCGCATAAATGAACGGCTAGCTTCTTCTCCAACCCCCTGCTTGTCTTGTGCTGACTGGTTCCTCGCTGGGTCACATGAAAAATTAGATAATTTAACCACCTCACCTATCCTCAGTAGGCTGCACGGTGCTTCCAGGGTCGCAACCTCTCCAACATGCAGAAGAACTCTTTTCAGTGACTATTCCTTAAAGACACGTAAGCCCAGTCCATCCCGAAGTGGAGGGCCTGACAGTGGTCTTGAAGGTGAAGGTGTCGGTCTGAGCCCCCACACTACGGAATCTCAGGGTTCTCATGGTTCAGAAGAAACTGGGGCCTTGCTTAAGGTCACTAAAAAGAAGTCTGCTCTTCCAAATCCGTTTCATTTGGGGAACCTGAAAAAGGACCTTTCAGAAAAAGAACTGGATATATATAACACAGTAAAACTGACATCTGGTCCTGAGAACACACTTTTCCATTATGTTGCCTTAGAAACAGTGCAAGGGATCTTCATTACTCCTACCCATGAAGAGGTGGCACAGCTGAGTGGCTCGATCCACCCTCAACTGATAAAGAATTTCCATCAGTGTTGTCTCTCCATTCGTGCAGTTTTCCAGCAGACGGTGGCTAAAGAGAAAAAGAAAGCACTAAATGGTAAAGATCATTCAGGTTCAACAAATTCAGTGTCTTCTCTGAACCCTGTGAAAGAACATGGTGTATTGTTTGAATGCTCACCTGAAAACTGGACTGATCAGAGGAAAGCACCACCAGTTATGGCTTACTGGGTAGTAGGGAGACTCTTTCTTCATCCCAAACTTCAAGAACTTTATGTCTGTTTTCATGACTCAGTTACAGAAATTGCCATTGAAATGGCTTTTAAACTGTTCTTTGGATTAACCTTGTAGCTGTATTTTCTTGATGCATAGCAACACTGTGCATAGACCATCAAGCAGGGTTAGAACTGCTGAGATCTGTTCACAAAGAGATAAGGTTTAACTTATTTTCACTAATCAATACTGAGCATAAGGCTGATGAAGACTGAGATGATACGCTGCTGGATTTGATGCACTAAATCTTATTCTGAGACTTTTGAAGAAAATACTTGATCAAAATATGAAAAAGAGATTGTTAACTTATTTTCCATTTTGGTATATAACATTAATTTATTTACTGATTTGAAATAATGTGATGTGTTTTATGTAAAATTAATATAAGAATGTTTATCTTGGAAAAATACCCAATTTTTTGTGTATTTTTATCAAGACTAATATTGATATCTGGCAAAATAATCATGAAATTGGGAAGAGATGACCAGGTTCTGTTACTAATTAGTCTTGTGACCATGAGCAAGTTTTTGTACCTCTCTGAGCTCAGATTTTTCATGTACAAATGAAATGATTGCTTTGAGGTGTCTAAAGATCCTCTTCAGTAAAATGTGCAGTTTTCCCCCTCTAACCTATTGTTTGGTACCTAAATTATTTGTAATGTTGAGCACTGATTCCTTCTTAGATCAGATATGTTTCTTCTGGGTGTTTTAGTAGATACCTCACTGTGGGGGAAGAGAGGAGTGAAAATTAAACTGACTTTTTTATTTATTTGATTTTCTTTACTCATTCAGGTCAGTTCTATTTTGACTAGGATATATATTTTTAAACTATTTGTTCATATACTTTCATTGTTTTTCTCTTTTTTGAAATATGTTCAGGTATACACACATTTTATACAAGTTCACGAATTTTAGGAAAGTTGTATTAAATCTTTTTTAAAAAACCCTATCATGTTGAAAACACTGAAAAAGTTAATTAAAGAAATTCTTTGGTGACTTCCAATCAATACAAAGTTTTGCCTTACAAATCTGGATGTATTGGGTTTCCCCAAAGGGGTACAATGAACAATAATTTTTAATTATTTAATGAACAATAATTTATTTAACCATGAGTAGAGAAAGAAAGTTACTAAGATCAGAATTTTCTTTAGCTGTCAGAATTTGGCAGATTGAAAGGAAGGAAGAACATGACAATTCTTAATTGACATTTACCCAGTGGATTCTCCTGAATTCTCAGATGCCCCCATGACTTTATAGCACTGGGTTCTCTCTTCGTCAGGATTTACCTTTCGAAAGCAATTTACACCAGCACATCTAAAGCCAGTCTCTGCCTTTCCCTACCTCAAGCATGAGACCTCCAGCTTAATCAGAATTAACTGAAAAACATAGTGGATGCACCATTTTAAATATTTGGTCTTAGAAGAAACACTATTATCCCTCTGTCGTGAGTTTGAGATTTCCCCCCAGGTGTTGAAGATGCAAACCACTATACCTGTCCTATTAGTGATTTGTGGGCCTTAATTTTGGCATTCAAAACAGAGCAAGAAACTTGGTAGAAAATGGCTTGCAATATCCTCCCTTTCAGATTATAATTTTGGTCAAATGATAGACTCTTTACTACTGTCTTAAGACTGCTTGTGCACATATATAAGTATCAAAGTATTGTTTAAGAGTATTTAGTAAATGTCTTAAATTTCTTGATAATGTTCCCTCAAACACCATGAAGCTATTTTTAATATGGAGAATTATTTATAAATGCAGCCATTGATCACCTCAGATTTTCAAACAGACTGAACTTGGGACTTACCATTAGGAACTTTTTGTTTCACTTAGTGAAATTTTGATCTGTTGAACTGTTTTCCTGGTCTCAAAGAATCAGAAGACCACTATTTAATAACTGAAATAAAAAGACAGACTACTGATCTTATATAAAGCCAAGTCCTGTGAAGTACTGCAGATGTGCTCTGTAATGTGCATGTTGCAGAGACATTGTATTTTTAAGAAAGAAAACCAAACATTATCTTGGCTCTTATCTCTAAATAGATATCAAAATAAGTGTGGCAAGTACTGTAAACTTAGCTGCTCATTTTTCCATATATGTTCAGATTCACACCTGAGAGTAGATGCGACTCACTGGACAATAAGTGCCTGTCTGCAACTTTAAATAAAGAGGGACATAGAATGCTTTTGCAGGTATAGAAACATTCTTAGGTTGGATTTTATCATCCTGCAAACGTTCTTTTTCACCAAAGACTGTAATGCAAAAGACTATATTTCCAGCATTAAAAAAAAAAAAAAAAAGCAAGTGCTGTCTTACCACCATCATATATTTTTTAGTCCCATCCCCCCACAAAATTACATTTTAGATTTCAACCCCCATTTCTCCATTTCTCTTTTTTGTCTCTTTGTTTGTCATGTTAGAGAATTTCTCTTTTTGTGCCAAGGGACCTCAAGGATGATGCATACTGGCAAGTTAGTAAATTGCAGTCCCTGCTTTTTTATATTTCTGATACAAATGGGAAGAGCTATGAAACCAATTTACTAGGTTTGTCCACTTTGAACATTCTTGAAAATAACATTGTGAATAATTATTGTTGTCTGTGTGATTTCCCTCTAACTAGTGCCTGGCACACATTATGTGCTATAAAAGTGTTAGCAGCTGCTACTACTACTACTACCACTACTTATTATTCAATATCCATTGGTTGAAAACAGTGGAGTCATCTAAATCATACCCTCTACTGTACAAAATGTTGGAAAGCTAAGAAAAATTATTCAGCACTAAACACTTTTAAAATGAGGATTTATACTTCGAATATTTTAAAATACTTTAATAAATATTACTAAAACTTTATATACTGTACTGCGTGGAAATTAATTTTTTAGAGTTGTACTTCTATATCACTGAAGTTATTTTTGCACTATATTGACAGTTTTTAATAAAGATGTGCAGAGGTTTG EMBV3_04584 ATTTTGTCCCGGATACTCCAGGCAGACATTTTTTGGCCACGAGGGGAACCAACTTAAATA Gene GeneID:526613|SIRPD:NM_001075887:1165_cdna Constitutive 0 NULL GeneID:526613 13 GENE SIRPD NULL signal-regulatory protein delta EMBV3_09201 TTGGGATCCTGATCTGAGCAACGTGAGGAGCGTGTGTGTTTCTCGGCACAGCTGGGTCTT Gene GeneID:618161|ZFP36L1:XM_002696853:703_cdna Constitutive 0 NULL GeneID:618161 21 GENE ZFP36L1 ZFP36L1 zinc finger protein 36, C3H type-like 1 EMBV3_06155 AGCAGCTCTGTACCTCATCTGGTGATCCCACCTTTGAAGAGGAGACACGATGCTCACGTT Gene GeneID:534652|NEK9:XM_002691010:336_cdna Constitutive 0 NULL GeneID:534652 10 GENE NEK9 NULL NIMA (never in mitosis gene a)- related kinase 9 EMBV3_39429 AGATCGATATGAAAGGCTGGATAAAGGTTTTGAAGGAACTGGCCCCGGACAGTGTGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23743 TTCCCAGCTATCAATCCCTGGGAGAGGGGCCAAGGCAATCATGTTTTGAGAGCTCTTCAA Gene BVV0102_198464 + 0 NULL GK000021.2:58407262-58409209 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119867 TCONS_00119868 1 XLOC_072989 Coding TCONS_00119868 XLOC_072989 Coding Coding C21H14orf109 21:58404663-58409854 j TSS89649 4757 1 TCONS_00119868_1 163 0.192768551608156 2 0.0838150289017341 0.000749924695099203 0.000769535152449319 0.000936933321468998 0.000384075586753941 0.000409148258208377 0.000163867092828073 0.000391287803028345 0.000425831198580132 0.000632434511254326 1.54233225370414e-05 7.01188949586431e-06 9.72397626552602e-06 6.88534914433401e-05 8.44955015092489e-05 0.000100908569975273 0.000302381771880025 3.93024315200334e-05 0.000236605266104307 0.00046459808445125 0.000284283564324388 0.000601955110903853 5.02543754854407e-06 0.000157557771580166 0.000112449760036845 0.000437702991657748 0.00051632526762607 0.000410613078152833 1.90497381272948e-05 9.93593440314689e-06 6.13812242291346e-06 NM_001077132.1 TMEM251 Bos taurus transmembrane protein 251 (TMEM251), mRNA. 0.0 3377 99.95 0.393945764137061 NM_001098621.1 TMEM251 Homo sapiens transmembrane protein 251 (TMEM251), transcript 0.0 1566 88.28 0.261929787681312 TCONS_00119868_1 sp|Q2HJ69|TM251_BOVIN TM251_BOVIN Transmembrane protein 251; 9e-121 342 100.00 0.993865030674847 1 noncoding 0 0 0 0 0.0988275907857864 0.601416889526584 -4.63840445923125e-05 0.999332749404654 ACCTGCCCAGCTCTGCAGCCTCGGCCGGTGGCCGCTGCCCGGCACTGGGCTCTCGGCGCTGCAAGGCGGAGAGGCCCGGGTCTGGCGCCGCCTGCGCAGCCCTGGTCGCGGCCGGCGGCCCCTGCTGCGCGACAGGGGGCGGGGCCGGCTGCAGGGAAGGCCCAGGTGTCGGGGGAAGCCTCCCGGCTGGGCCGACCGACACAGGCTGGGGCTCGGGCAGCAGCGACGGGGGCCAGCCCCCCGCGTGACCGGCTGCAGTCACGCTGTGCTTAATCACACTTAGTCTTTGCTCCAGGCTGGCCGTGCTCACCATTCTCCCAGCCGGTGACCCCGGGGGATTTCTTTTATGGTGGCTTTTTCTCTGAAATGCCAAAGCCACCCGATTATTCAGAACTGAGTGACTCTTTAACGCTTGCCGTGGGAACAGGAAGATTTTCGGGACCACTGCACAGAGCATGGAGAATGATGAATTTCCGTCAGCGGATGGGATGGATCGGAGTGGGACTGTATCTATTAGCAAGTGCAGCAGCATTTTACTACGTTTTTGAAATAAATGAGACTTACAACAGGCTGGCCTTGGAACACATTCAACAGCACCCAGAGGAGCCCCTTGAAGGAACCACGTGGACACACTCCTTGAAAACTCGGTTGCTCTCCCTGCCTTTTTGGTTCTGGACAGTTGTTTTTCTGATACCTTACTTACAGATGTTTTTATTCCTTTACTCTTGTACAAGAGCTGACCCCAAAACGGTGGGCTACTGTATTATTCCCATATGCTTGGCAGTTATATGCAATCGCCACCAAGCATTTGTCAAGGCTTCTAATCAGATCAGCAGACTACAACTGATTGACACATAAAATCCGTCATCATCTTTTCCTTACAAGTACAAAACTGCCAGTATGATATGGAGCCTGATCACAAGACTGCAGTTTCTTCACAGATCTCAGGAAGTTGTGGTGGGGCAGAAGCTTTTTAAAGAATGTGGCTAGGGGGCTAACTTTATCTGAATAATGAGTTTTTAGGTAAAGACTGAGAATCAGTACTACAAAATCATGTGGATGACTTCAGATTTTGGAAGTAAAATTTTATCTGTTATTTGCATTCCTTAGAAACTTGAATAAGTACCTGGACTCATATTTTTATTTTACTGTGCAACATAGTGATAATTCAGAAAATTTTCCTTTGGGGAAAAATGAATATGAACATTTCCATTGTGCTTAATGTAAAAAGGTCCAAACATGGTCATAAAATTTAAATTTTATACAATTACTTGGCTTGCTTTAAAATTCTTCAAACTAAAACACCAGTTCATCCCATTGTAGCTAAGGCAGTATGCTCGTTTGCTATCAGCTTGTGAGAAATTGGTATGAAATTATTGAGGTGATGGGTGTCTTGAGAAGCAAAATGTGATCTTCCTTTTGGTAATAATACGGGTGCTGTTCATTAGCTAGAATTATTAATGCAATTAAAAAAAAACCTACTTGGGAAAAGACTAAATGTTTGAAAGCTGAGTAATCTAACACATAGAAAATGGAAACAAGGTGTTCAATGAAAGCAGTCCAGTCCCTGTCAGATGTGTGCTATCTAAACGATGCTCTCAAGTCACCATCCCTCTGATTTTCTTTTCTGCCTAAAGTCTAGTCTTCAGGCGATAGGTTAACTGCATGGAGATGTGATCCCTGTACTGCCTCTTGGATTTGTGCTCACTACCTCATGTCTGGTAACAATACAGATAACTGAAAAATGGAAAACTAGATTTTAGGAATTTTTTTTTCTTTTTTTTCTGGGTGAGATCAAGATATATTTTTATAGTTATGTCATCAATACCAGAGAAATGTTGTACACTGATTTTTAATAAGAATCGTAACATTTTTTGGTGCTTCTCTTGGGCTCTAAGAGCTTTAACGTCAATCAACTCTTGTAGTCCTCCAACAGCCCTATGAGATAACAGTTATTATCATCCAGATTTTACAGGTAAGGACAGTGAGCTGAAGTTCTGTAACTTGCTGAAGGTCACATAGCCAAGAAGCAAAGCCAAAGCCTAACCCGGCATCTGATGCCTTTATTCCTAATCCCTGAGCTGTAGGGCTTCTCACAGATGACAGATGTTTCAGCACTGGGTACTGTCTGCCTAACCATGCTAATAAATGGAAAAGAACTGAAGAAAGGTTTTTCTCAATTTGTATGAGCTACTGAAAACCAAAGTCTTCAAGCAGCTTTAAGTCAGGTTTGACCAGAATGGAAGGCTGGGCATTCCATAGGAAGCTTTTACTTTAAAGATTAAGCAGGTGTCCTTGGCACAATCAGATTCTTCTCCAGTAGTCTCATTTCTCTCCTTTACTACTTCCAAAGGTCTAGTTACTGAAATGTTTTTTTGCTACAGGACACTGATACACTGAGTCTTCAAATTAAGTAACAGTTTGAAATACATGTTTTTGCAAGGGACAGGTAACCAAATCACTTGCATCTTTTGAGTGCTTACTAGAAGTATGCATGGCTGCAGGCAGATTCCTGAGACATACAGATTCTGCTGCATGAGAGTTCTATGATGCAAGTATGTGTTGGGACTAGTACCACCTTACAGAAGAGGAAAATGAGGCAGCCTGAGGCACACAGAATTAATAACTTGTTGGTCACACTGCTAGTGGAAGAGCCAGGATTTGAACCCAGGATATCTGGCTTCAAATCTCCAGCTATATCATTCTACTATACTGCTTATCAAAAAAAGGACATAATTTAAGAAAAGTCATTGCATAGTTTCTTGTTTTATTTGATTTGTCCTGAGGCAGTGCTAGTTTGGAAATCGTTTAAGAACATTATTTCCATCACTTTTTGTTTTACAAATGATGTAATGAAAGGTTTGTGAGTTTGCTATTTGTCTTGTAAAGTAGTAAGTCCGTATTTTATTGAGGGAGACTTTCTTAGACTTAAAATTCTAGTAAACTCTCCCACATACTGCAACTAGAGAGTAGCCCGTTTGCTGCAACTAGAGAAAAGTCCATGCAGCAACTGAAGACCCTGCACAGCCAAAAATAAAGAAATAAAGTCATTAAAAAAAACAACACTACAGTTTTAAAGGGAAAAATGTGATTCCCTTAGAATTTGATTCTACTTCAAACAAAGCTTTCGAAAACTAATACAATTATGTAAAGTTTAAAAAAAAAAAAAAAACACTTTACATGAATAAACATATTTAACCCTTGCAAAAAAAAAAAAAAAAAGCTTTTCTTTGGGGAAGTGGAATCAAAGTGCTCTGAAGTGACAGCACCCAGAGAATAATCAAACCTGCATGTTTGTTCACCATGAGTTGTGTTAAAGTCTTTGTTAAAATTATCTACTGTTGATTTCCTTCTTGATGGATTTAATGTTCTCAATCTCTCTAAAACACTGGCAGAAAAGGTTATCACAATACCACGTCTTGTTTTTGCATCAAATAAGTGCCATACTTTATAAGTTCTCCAATATGTTTATAATGTTCTACATAATTCTAGACCATGGTTGGGAATCATCATGCATTGATATTTTTGTTTTGATCTACGGCAGTGAGTGGGTCTTGAACTCTGTCTGATATTATAATCACTCAAGGAAATAAAAAAAACTGCAAACCTCATATAAACAATGCCAGGGTCCCTTCCCAGCTATCAATCCCTGGGAGAGGGGCCAAGGCAATCATGTTTTGAGAGCTCTTCAAGCAAGTCTGTTAGGGTTGAGAGTCACTGGGCTGGAGTGTTGTTGTTTTCTTTCTTTCTTTTGGGCCAGGGGTTTTTATGCACCATGAAGCCTCAACTGTTAAGTCACTGAGAGCTCTCTCTGGAACAGCGTTTGTAACAAACATTTCATGGTAGGCTCACGCCAGCTGTTTGAATTCTGCAAATCTTTAAAAAGGTGTCTATATATTCTTTTTCAACATATTTTTTCCCAAGGTTTAAATACACTTGTTACAAGGGGCCCTACTGAGCAGTCTTATGAACTAATATGTGTGGTCCTGGGATATCAGCCATGGAGAGAGGTCATGAAGGTCAGATGCAGAAGGTCACTGTAACTGAAGGCCAAGTTCTAGGGGAGGTCAGCCAGTAATGCAGCAGACATGATCAGTTCAGGCTGGGGGTGGTCAGGTCACAGATAAAGGAGAGGACTCCTGCTTCTTGTAGTTCTCCAGGTGTGGCCAAGGCCCAGCGCCAGGCAGGAGGAAACAGGAAGCAGGAGGTGAGCCCAGTGGTAACATCCACGGTCCTGAGCTGCTCCTGTAGTGGTTTGGAATGGATCTGGGCGTGGGGCACTGGGAGCTGCAGGCCGGGCATGTCAGGACCCTCAGTGGCAGGGACGTCAGTGTAGACAGGACCACACCAGGTAGACTGCAGACAGCTGCCAGCCCCAGCTCACGGTGGGGAACGAGGTGTCTGTATTTCCTGATTCCTGTTGTCCAATTTATCCTGAATATACTTGTCAGGTTTTTGTCTCTGACTCTATCAAAGTCGCTCTCTTGTCAACAGGTTGCCAGTCATTTACATATAACTAAACCCAGTGGTCAAGTCTGTCTTCAAATTACGTTTTTTGGCCATGCCATTCCTTGGGGGAATCTTGGTTCCCTAACCAGAGACTGAACCCACACCCTTGGCATTGAAAGCATGGAATCCTAACCACTGGACCACCAGGGAACTCCCCCTCAAATTACTTTTGGACACAGTCCCTTGTCCTTGAAGTATTTTCTTCTGTTGGCTTCTGGAACAGTACTGCTCAATAGAATTTTAGTGAT EMBV3_25583 AACCAGTATATGTTTCAAAAGTACATTATGCTGGACAGCACGAAGTTGTAGCTATAGGCA Variant GeneID:537320|ADAD1:XM_002694396:31_cdna 599^724 2 EMBV3_07289 GeneID:537320 17 GENE ADAD1 NULL adenosine deaminase domain containing 1 (testis-specific) EMBV3_06323 CTTGCCCGCTGGGCGGCCTGGTTGACTCTCCTTCCTATTGTTTACAGTGAAGGTGTCATT Gene BVV0102_078744 + 0 NULL GK000010.2:45858891-45875013 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013744 TCONS_00013741 TCONS_00013758 TCONS_00013755 TCONS_00013743 TCONS_00013759 TCONS_00013756 TCONS_00013760 TCONS_00013746 TCONS_00013757 TCONS_00013745 1 XLOC_008193 Coding TCONS_00013760 XLOC_008193 Coding Coding CSNK1G1 10:45762476-45871582 j TSS10132 6159 1 TCONS_00013760_3 420 12 0.943659777278768 6.41527624108875e-06 0.00177673501748324 0.000445400862566644 0.000659417884383365 0.000612826301535434 0.000774860051007907 0.00049902831814642 3.35725254190848e-10 0.000677787765689098 6.04002653993738e-05 1.75229864931597e-32 2.00765863967659e-09 6.31550392940619e-13 2.08186333053045e-07 0.000380216424174134 0.000838031525692669 2.69146649594597e-10 4.07354831301131e-07 0.00160204124866219 0.00104872110461907 0.000837903081729855 7.9481184590153e-08 0.00016597516402609 0.000718934828754128 6.47160066226692e-07 4.51311077905451e-05 6.86517678807052e-08 7.52321531380365e-07 7.87557894560583e-05 0.000249979347027484 XM_005211682.1 CSNK1G1 PREDICTED: Bos taurus casein kinase 1, gamma 1 (CSNK1G1), 0.0 1.107e+04 100.00 0.996752719597337 NM_022048.3 CSNK1G1 Homo sapiens casein kinase 1, gamma 1 (CSNK1G1), mRNA. 0.0 4017 83.08 0.628511121935379 TCONS_00013760_3 sp|A7E3X2|KC1G1_BOVIN KC1G1_BOVIN Casein kinase I isoform gamma-1; 0.0 863 91.90 0.997619047619048 3 coding 0 0 0 0 -0.494639398939832 0.0689070038121933 -0.00320646128510124 0.947940799330515 ATATCAATTCCTGAATTCCGGTTACACAATGTTCTCCTGTGCTTGAGATCTACAGACTACGTATCCTACAAGAACTGATCAATGGTTTTTCATCTCCTGGAAATAACATAAATATGGTGCCAAAAGAACTCTTTACCTTACTCTGACGACAGTTTATTCGGCCATACTTTTATATTGAAGAGACGTATACAGATTCAATTACTTGTGCGGAGACTCTGTCGTGTAGGATCATGGACCATCCTAGTAGGGAAAAGGATGAAAGACAACGGACAACAAAACCCATGGCACAAAGGAGAGAACATTGTTCCCGACCATCCGGCTCGACATCCTCTGGGGTCCTTATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATCTCTACACCAATGAATATGTAGCTATCAAACTGGAACCAATAAAATCACGTGCTCCACAGCTTCATTTAGAGTACAGGTTTTATAAGCAGCTCGGCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCGTGTGGGAAGTACAACGCCATGGTGCTGGAGCTTCTTGGCCCTAGCTTGGAGGACTTGTTTGACCTCTGTGACCGGACCTTTACTTTGAAGACTGTGTTAATGATAGCCATTCAGTTGCTTTCCCGAATGGAGTATGTCCACTCAAAGAATCTCATCTACCGAGATGTCAAGCCAGAGAACTTCCTGATCGGTCGACAAGGCAATAAGAAAGAGCATGTTATACACATTATAGACTTTGGACTGGCCAAGGAATACATTGACCCTGAAACCAAAAAACATATACCTTATAGGGAACACAAAAGTTTAACTGGAACAGCAAGATACATGTCTATCAACACGCATCTTGGCAAAGAGCAGAGCCGGCGCGATGATTTGGAAGCCCTGGGCCATATGTTCATGTATTTCCTTCGAGGCAGCCTTCCCTGGCAAGGACTCAAGGCTGATACCTTAAAAGAAAGATATCAAAAAATTGGTGACACCAAAAGGAATACTCCCATTGAAGTTCTCTGTGAAAACTTCCCAGAGGAGATGGCAACCTACCTGCGATATGTCAGGCGATTAGACTTCTTTGAAAAACCTGACTATGAGTATTTACGGACGCTCTTCACAGACCTCTTTGAAAGGAAAGGCTACACCTTTGACTACGCGTATGATTGGGTTGGGAGGCCTATTCCCACTCCAGTAGGGTCAGTTCATGTAGATTCTGGTGCATCTGCCATAACTCGAGAAAGCCACACACACAGGGATCGACCATCACAACAGCCTCTACGAAATCAGGTGGTTAGCTCAACCAACGGAGAGCTGAATGTCGACGACCCCACAGGAGCCCACTCCAATGCACCCATCACAGCTCACGCCGAGGTGGAGGTAGTGGAGGAAGCTAAGTGCTGCTGCTTCTTTAAGAGGAAAAGGAAGAAGACCACCCAGCGCCACAAGTGACCAGTGCCTCCCAGGAGTCCTCAGGCCTTGGGGACTCTGACTCGATTGCACCCGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGTGGGGGGAGGGTGGAGATCCAAACCAAAAAGAAGAAAACAGATGCCCCCAGAAGGAGCCAGTGTGGGCAGCCAGGGCCCAGTGGGTCAGTGGCCACCCCTACCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCCGCAGGTCCTCCACTGCTTGCCCGCTGGGCGGCCTGGTTGACTCTCCTTCCTATTGTTTACAGTGAAGGTGTCATTCACAAAAACTCAAGGACTACTGTTCTCTTCCCATCCCTTAGTTTACTCCTGGTTCTTGCCCCACCCTCCACCCTCTCCAGCACACAAGCTAATGAGCTGAAGGCTTTGTCTGCTGAAGGAGTTTAAGAGGCTGGGGGTGTGGCCAAGAAGGTGGGAGGTAGGTGCAGGCCCAGCTGGAGGAGGACCTCCGCCCACCAGGTGTGTTGGCGCAGCTCCCTCTCCGTGCCTGTGCAGCCTCCACCCCCAGCTGGCCGCGGGGTGCAGGTTACTCCCTCCATCCCTCTTGTGAAGTTACACTGTAGCACGCAAGCTGTGAGAAATCTGCAGTCTACTGTCCCTGCGTGTTGGCGCTCTTAGCTTTCTTGACAAGCGAACTCTGTTCTCCAGACAGTAGTAGTAGAACGTTGCAAGTTGTTCTGAGCAAAGGAAAAGACTGACTTTATTGCACTTTTAGTTTTTTTTTCCCCTCTTTTTCGTTGTCGTTTTAACACAAAAAAGAACCATGGCAGATGCATATTGTGTCTGGTTATATTGGGATTTTTTACTTTTTTTCTGTTCGGAGGGGGATGGGGCCAGCAGCCAAGCCATGCAGAGAGAACATGGGTCCAGAGGACGTTCTCCGTGGAAAGGGCGGGGTCCGCAGCACCCGGAAGAGGAGGAGCCAAACTCTGCCCTTCTGAGTGAACGCTCAGGTTGGCAGGGAAACATACTTGAATTTTCATTCGTCTTCTCGGCTGCTGAAGAATGTCCCTCCCAGAGCCTCTTGACCTCATCAGCCTGCAGTTTGGACAGCCTCGCTCTCCAGTACGTGGGAGGAGCCGGCCAAGCCAGACTGCGACCAGGAGTCAGTTCATCCCAGAGAAGGAGATGGTTAACAAAACCGGAAATATCTGTTTCCTCCACTGCCAGGGACTTCCAACTAGATAGCCATGTGACTTCTTTAGTGACTCGGGGGACAGAATTAGTGATGAAACAGCCACCACCATATTGCCACTTAGTGGACAAGAAGGAGGAAAGTGATCCTGCCTTCCAACTGCCAGAGGAAACCTCAGGATTTGGCTCATCGCAGGGGCCAGGAAATAAAATTGGTGTGTACTCTCTGCCCCAGTAGATGGGTTACAGCATTTGGGCTGGCCTGCCTGCCTTACCAGAAATCAAGCACCTGCAGATCTCCCAACAGGCCCATAGCAGCAGGCTTAGGACTCAGTACCTAGGGCTCTGAGTGAACAGGAGGGTGGGGCTGGTTAGTGCTGGAAAATTCCAGGGGAAAGGAGACGGAAATGAAAGGTGTGAAGTCATCTCTAGATAAGACAGCCACATGTCTAGAGCCTGTACTCCCCCGGCCACTCTCCACGTCCCCCATGCTGTAGATACACGTGCTGCTGTGAAGGGTCTCAGTTCCTCATTCACTGCTTGAAAAGTCATCAATGTGTGGAGTTAATCTCCTCATCTTGATTTTCATTTGAGTTGAGTGACTTAATCCAAGTAGTGATTTCTCATTCCAGAGATGATCGAGGAGACAGGATTCAGTCCGTCAGAGAATGAGGTCTTGTATCTGGGGGTAGAGAGAGCTAACCATGGGGGAGAGTGACTGGTGACTTAGTTCAGAGGTTTGGGGAACATAGTAGTGCCTCTGGCTTGAAGAGTAGAGCTGTCTTTTGGACTGGAGGGTGTGGGCCTACTTCCTGGTAGTTGCTATTTTCCACAACAGGTCCCTTGATGTATCTTAGTGGAACAGTTACTGGGCTTCACTTGTGTTCCACTGGGCCTTGGCTAGGAAAGACCACTTCATTGACTTCAAATTTGCCTAGCTTATGTAAAGATTGTGATCTTTAATTTTTTAAAAGAAGTTTTCCTGTAAATAAAACAGAATGGCTGGGAGATGCAGGGACATACCCCTTCCCCACAAGAATTTTGAATATTGGGGTTTGCTTCCTTGACATTAGCTGGTGGTTCAGGCACTGTCACTGAAACTTAGATAGTTTCTCATTTGGCATTTGGGTAACTTCTCAATTTGCGTAACTCTAACGTCCTGTACAGAATCTTTTCCTTCCACATTCCAGTATAGAAAAGGCCTGCTTCTCAAGGGAGGGCAAGGGCAAGTGGCGAAGTCTGGAGCATCCCTGGCCCTCCATACTCCACTAGGTGCCTCCCCACTTCCACAAGGAAAGCAAGGGTAGTTCCCAGCTTGGCTGCAGGGCGGGCCCTCTTGAAGCTGGATTTATGACTTTTGGGGGGTCTTAAGTTTGTTTTAAAGGCTGGCTCTTGGGGGACTGAGCCTGAGCAGTTGTGGGGGGGTCTTCCTAATGCACTATTCTCACCCTCAGCCTCCCACAAATCTCTTATGAGATACTTGATTTTTCATAACAAAGTGAAACACCCAAATTTTTCTGGCATGCCAAGTAATGGCAAGTAATGATCCTCCCAGGGCCATTGGCACTCCAGGGTGGTTCCAGACCCCTGAGAGATTCTATTGTGATCTTTTAAAAAGAGTACCTAAGGAGTAATGTGGCCATCAGTTCTCTCCCCATCAGCACATCTCATCAGGGCTGCCTCCTCAGCCCTGTTGCTATCGTTGCTTACCTCCATTTCTCGGCCAGGTCCTCTGGCATGGGCGCTCCCTGCACCTACTGCCCACCCAAATCCGCTTGCTCCATAGTCCGTGCACTTCCCCCACTTCACAGCCGTGATACCTAGGGGTCTTCTTCGGGGCTGATGGAGTTGTTGCTGAGTTAGCATTAAGCAGTAACAACAGCCGGGGTTCTCCCAAGCCCTGCTGTCCTTCAGATTGCATCCTGAACAGATTGAGGCAAGCAGGCCAGGAATCCGCCAAGATGTAAACGGTCCTCCCCTGTGACCAGAGCGTGACCGTGTCTGTGCAGTCTGAGCACATAAGTGTCAACCACTTGCTGGGCATCCCTTGGCGTTCCCCAGTGATCTCACTCCAGATGGCTCCGCAAGGATGGAGCGTGTGCCAGCAGCTGAGTACTCTCATAACTGCCTTCATTAACATGCTCCTGCCATTTGGGGTCTGTCCAGGAGGAAACGGTCTGGGAAGGTACAAAGTCAGGTGACTAGGTTGGCCTTCAATTAAAGCCCCGCTGTACTTTGGAATGCAGGGGCAACAGCAGATAGCAGGATTCTGAGTTTTCCAGAAGGGTTGATTGCCTGTTCATTCTCAGTGAACTCCAAGTTCATAGAAATAGCCCCTACCATTAGCCAGAAGAGGTGTCCATTGCCTCGAAAGTACCTTCCAACTTAGTTCACTGGAAATGTACGTTGCGAGTACATATTCAGTGTTGGTTCTCAGTGTTAGTAACCACTTTTGTTGTCAGAAATAAGTGAGAGTGACATTATGTCAGAGTGGTTACTAAAGATCATAGCCTTAACCTTTTTTTATGCAAAAGACAACCTGTCTCTCTTCCAGTGAGCCGCATGGCCTGCAGTTTTCAAAAATAAGTGCTTTCATGGCAGCCTAGAAAGTACCTCCTCTGAGGACATTGACCTTTCATTTAATGCATGTCTATATGCCTCCTGTGTCCCAGTCACCTCTTCTGTTTCCATATTGACACCAGATTTCATTCTCAGTGAACTGCTCTGCCAATGTTGTCTCCAGTGTCAGAGCCATGTTAGGGCTAGAATTTCTCAGATCAGGAGCTTGCAGTGCCATACAGCCAGCATTGCCTTTGCTAGGCCACTGCCACCATCCCCACCATTGATCCAAGGTGGGCAGATGAATTCTAGAAACCTTTAGGGGGCCAGGATGACTCGGCACCCCATCTGGTTTGATGTGAACAACAGGCACTTTTCTCTGGAGTTCTTGCTTTTGCCAACTCCAGGGCTCCAGAAAGGTCCTGCCTAGAGGCTGACAGCCAGTGAGTCCCAGTCTTCCTCCTTATGGTTTGCTAGGAATCAAAATGGGATGCCTGTGGGTTGTTGTTGTTGTTTTTTTGGTGGGGAAAGGGAGTGATTTTGTTTATGAATAAGGAAACCATGGCCCTTTTGAGGGTTTGCAGTGTCTTAAGCAGTGTTTTAGCCACAAGTAAGGAATCTTGGAAATCTTTGATCAATTAAGCAGTCTTAAAAATCTGTTTTTCCTAATTCCTTTTGCAGGTGACTGAGTGCAAAAGGTTTCTCCATTGTATTCAAAATAGTAAGTAGGTTCCCTGGATATAGACAGTAGTAGTTGACATATTTCCTTAAAAAAGCAAGCAGGAAGTCCACTCCAATGTGTATTTGTAGCTCAGCTTGTATTACAAAGGAAAAAAGTGAACGTGTACTCTGTATATTTCTAGTTTGGTTACCAAACTCCATGTTATAAAAGAACCTCAGTTCTGTGGACGGAATTTATTTTACTGTTGTTCTAG EMBV3_01589 CAATCGCAGGAAGCAGCTCACCTTCCACCGCTGGTGAGGGAGAACACGGACCCTACCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25080 CAACCATTTTGGCACCAGGGGCTGATTTCATGGAAGACATGTTTGGCGATGGAGGGGTGA Gene GeneID:539728|MOCS3:NM_001081734:1240_cdna UTR3_Alt 1 NULL GeneID:539728 13 GENE MOCS3 NULL molybdenum cofactor synthesis 3 EMBV3_19412 GTTCCGATTATGGCACTTTTTGTGAAGCAGTAAAAGATAAGAAGAAAAGAACTCCTAAAA Variant GeneID:280867|PRG4:XM_002694252:225_cdna 317^589 1 EMBV3_28985 GeneID:280867 16 GENE PRG4 MSF lubricin proteoglycan 4 EMBV3_06632 TCGAGATCGAGTCGCGCCTGGGGGGCACAGCTCATTGAGGCCATTCGAAGAGCCAGTAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33737 GTGAGCTTACTGCAGGGAAACAGCGTAGACACAGACTAGAGAACGGATTTGTGGACATGG Gene BVV0102_048512 + 1 EMBV3_15939 GK000004.2:107742119-107804448 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03315 GTAACCAGCTGTCACCTAAGCCCTCTGGGAAATCAAAGGGGAGAAGGGATGGTGAATCCT Gene BVV0102_165853 + 0 NULL GK000010.2:70196040-70578791 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31828 CATAGCCTCAGGCAGAAACTGAGCCGCTGTATTTCCTGTGCTTCATCAGCTAGAGAGATG Gene GeneID:782075|IL26:XM_002687395:110_cdna Constitutive 0 NULL GeneID:782075 5 GENE IL26 NULL interleukin 26 EMBV3_18218 GACTGTTTTGTGCTGATAGAACTGAAAGGGTCGGAAGAAGTGGCAACATCCCGGCTGGAA Gene GeneID:406231|EIF2C3:NM_001001133:47_cdna Constitutive 0 NULL GeneID:406231 3 GENE EIF2C3 NULL eukaryotic translation initiation factor 2C, 3 EMBV3_43617 CGCCAAGGCCCTCGAGGGGTCGCCGCCGAGGCCGCCTGGGCTCCACTTCCAGTAACAGCT Variant GeneID:506990|PPDPF:NM_001075294:907_cdna 126^206 1 EMBV3_43613 GeneID:506990 13 GENE PPDPF C13H20orf149 C20orf149 pancreatic progenitor cell differentiation and proliferation factor EMBV3_17815 CTTAAGCTGAGGATGCAGAAGGCACTCAACAGGCAATTCAAAGCAGATAAGAAGGCGGCG Gene GeneID:509208|SFRS16:NM_001077887:166_cdna Constitutive 0 NULL GeneID:509208 18 GENE SFRS16 MGC152223 splicing factor, arginine/serine-rich 16 EMBV3_01822 TCTGGGCACTGAAAATGATCTCAAAGCACAAACTCTTTCCTGCCTGGGTGTCCCAGTACC Gene GeneID:100297097|LOC100297097:XM_002692113:9_cdna Constitutive 0 NULL GeneID:100297097 13 GENE LOC100297097 NULL hypothetical protein LOC100297097 EMBV3_24135 AATACTCACAGCCATCCCGTGCCCCATCAGCATACCATCACTCTTCTGAGAGCAAGAAGA Gene GeneID:522724|LOC522724:XM_002697076:596_cdna Constitutive 0 NULL GeneID:522724 22 GENE LOC522724 NULL similar to Protein bassoon (Zinc finger protein 231) EMBV3_04535 GGAGACACTCCGACACATGAAGACTTGACCAAGAACAAGGAGCGGACATCAGAAAACAGG Gene BVV0101_026941 + 0 NULL GK000002.2:125109544-125213836 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106550 TCONS_00106537 TCONS_00106546 TCONS_00106545 TCONS_00106544 TCONS_00103737 TCONS_00106541 TCONS_00106548 TCONS_00106549 TCONS_00106542 TCONS_00106553 TCONS_00106551 TCONS_00106547 TCONS_00106540 TCONS_00106543 TCONS_00106538 TCONS_00106539 2 XLOC_062833 XLOC_062200 Coding TCONS_00103737 XLOC_062200 NonCoding NonCoding - 2:125112749-125113232 - TSS76976 483 2 TCONS_00103737_2 57 1 0 0.0207253709670208 0.015915262776804 0.0164351860479789 0.0141429550746581 0.0180224377600873 0.00562859141710382 0.0178054387845128 0.0195860654853959 0.0177906564159491 0.00549720913714129 0.0036706542020526 0.00317342501245888 0.00705676941877625 0.0100539651240967 0.0101846295961336 0.0101576327649973 0.00139961568971004 3.38134832550966e-47 0.01184316959403 0.0365768536904561 0.00454139588793381 0.00955903953904215 0.00501636336548902 0.00441256192296202 0.00648966026269361 0.0157187112602085 0.00619999051264803 0.0021562806524208 0.00159480837926357 0.00315786977176623 NM_001166005.1 EPB41 Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) (EPB41), transcript variant 1, mRNA. 0.0 652 90.21 0.991718426501035 0 noncoding 0 1 1 1 0.0179166527211148 0.87881608747675 -0.0695141321057341 0.524865963589323 CCTGTGTTTCTGCACTGCTTAATGAATGGAGATCCAAGGATGGGTCTGTTTTGAGCTCAGGTTCAGGAGCTGCAATTGGGGCCTTTAAAATGATTTCTTCATCAAGACTGGCTCCAAATTCTATCTCCTTCTGGCCTCCTTCACCTTTCTCTTTAGCTGACTCTACTTCTTTGCCTTCCTCCTCAGACACCTGAGATTTAGGCCTTTTGAGAAATGAGGAGAACAGCCGTGACAGGCCCCTGTTTTCTGATGTCCGCTCCTTGTTCTTGGTCAAGTCTTCATGTGTCGGAGTGTCTCCATTAGATGTTTTCAGCTTCTGCTCACACTGATTATCTCCCTCAGCTGCTGCTTGAGAAGCCTCTTCCAACTGAGTTTCCTGTTGACCGGAGCTTGTGGCTCCCTCACCCTCTTCCTTCTGCGGTTGGTGCTGTGGATTTTCAGCCTCAGCCACTAAACTCTTCTCTGTTGTCATGATGTTGCTAT TCONS_00106553 r 5' 0 TCONS_00106553 r 5' 0 EMBV3_38635 CTAAGTCTGCTCCTGCCCCTAAACAGGGCTCTAAAAAAGCTGTGACCAAGGCCCAGAAGA Gene GeneID:617043|LOC617043:XM_002691912:39_cdna Constitutive 0 NULL GeneID:617043 12 GENE LOC617043 NULL similar to histone 1, H2bn (predicted) EMBV3_22913 AGCAGGTACAGACACATTGAAGCTGCTGGTTACTCAGGTAAGGAAGTAACCTCCGTCTCT Gene BVV0102_241428 + 0 NULL GK000023.2:27067758-27083668 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34273 GAGTAGAGGATTCCCAGGCAGATAGTTTCAGCTCCAAGACTTCAAAATGCCCCCTTTCCC Gene GeneID:404089|CLDN2:NM_205781:10_cdna UTR3_Alt 1 NULL GeneID:404089 X GENE CLDN2 NULL claudin 2 EMBV3_26675 TCTTTCGATATGGGAGGAGGGGCTTGAATAGATGAGGTCTGGAGGAGGGGCTGTTAGTTA Gene BVT0102_039749 + 0 NULL GK000020.2:33405558-33455666 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23230 CGTTTTTGGTAATCTGTGCAGCTTGTGTTTGCAGTTATGCCCGAGCCGGCAAAATCCGCT Gene GeneID:615043|H2B:NM_001037469:166_cdna Constitutive 0 NULL GeneID:615043 3 GENE H2B MGC133641 MGC152559 histone H2B-like EMBV3_36861 ACTCCATATCCCTGAAGGAACAAGAAGAAAGCTTAGGGAGCCCCATCCACCATTCTCCAC Gene GeneID:509823|PALMD:NM_001035079:71_cdna Constitutive 0 NULL GeneID:509823 3 GENE PALMD MGC128581 palmdelphin EMBV3_07457 TTTTTGCTGCCGCTGCCGCTGGTGCTCTCCGGTAATGGGACAACCGAGGAACAAAGCTCA Gene GeneID:100335669|LOC100335669:XM_002686961:11_cdna Constitutive 0 NULL GeneID:100335669 4 GENE LOC100335669 NULL hypothetical protein LOC100335669 EMBV3_20294 CACCTCTCCTTGGAATAGTCACATTCGAATGCGGCAAAACCATCAAAAGGAGCTCAGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26475 TTTTCGGCTCCATCTCCTGGATCGCCGTCTTCTCTTACTTGATGGTCTGGTGGGCACATC Gene GeneID:525618|SLC24A2:NM_001144094:8_cdna Constitutive 0 NULL GeneID:525618 8 GENE SLC24A2 NULL solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 EMBV3_17268 GCTTCTTTAAGCAACTGTCATCCAGGCCCCTCCAGCCAGGCACCCCATGGACTTGATTAA Gene GeneID:537616|POLD3:NM_001167904:31_cdna Constitutive 2 NULL GeneID:537616 15 GENE POLD3 P68 polymerase (DNA-directed), delta 3, accessory subunit EMBV3_10333 GAAAGCTGGGAGGAGGCGGCAGACAGCGGGCAGGAAATCCAAATCTCCTCCCAAAGTGCC Variant GeneID:512452|C2H1orf144:NM_001114608:143_cdna 69^118 1 EMBV3_19459 GeneID:512452 2 GENE C2H1orf144 C1orf144 MGC137449 chromosome 1 open reading frame 144 ortholog EMBV3_43640 GGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGTCTGGATTTCCATCAGCATT Gene BVT0102_348325 - 1 EMBV3_21500 GK000028.2:24715402-24745779 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187309 1 XLOC_113357 NonCoding TCONS_00187309 XLOC_113357 NonCoding NonCoding - 4:49210972-49216751 - TSS139677 5779 4 TCONS_00187309_8 100 0.871950164388303 1 0 3.47157061634258e-06 3.13797790028885e-06 7.20590731995359e-07 7.18476437972114e-07 7.11942870053001e-07 1.09807541372704e-06 3.34131088176685e-06 2.37960038439411e-06 2.44005468531293e-06 0.000976959059967646 0.000498025659062529 0.000328809245159884 6.22005791629898e-05 0.000416887163951829 4.62749266372512e-05 0.000584874678829654 0.000386466951838433 0.00148283383403347 6.71193019971437e-07 7.85318274242888e-06 1.89653209070361e-06 0.000429936733708034 0.000891396459671061 0.000724398138111298 3.32717276519099e-07 1.91052963361608e-06 3.01807783561383e-06 0.000974681029828462 0.000458936649758598 0.000967082216766332 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 863 91.95 0.104862432946877 0 noncoding 0 0 0 0 -0.84139902853958 0.108893530161815 -0.0404406565693177 0.457258585355567 CTTTACACAGTCTTCAGTGATAGTATCATTCTCTTCACTTTACAAATGAGGAAAAGATTTAAAGAGATTAGCCAGTTTCTCCAAGGACTTGAACAAATGAATTGCCAAAGGAGAGTTGGTGACTACAAAGTCTATACCTTTTTCCCTCTAGCACACTATAAACTATTATGCTTTTTTGTCCTTTAATCCTCTTTGCCTAGAAGTCTTCATGACCCAGAAATTACATTTCATTTTTTTTTTAACTCTTCTCTGTTAAAATCCTATCCACTTTTCAAAGATCAATTTATTATTATTTTTGTTTTGACCGTGTTGTGTGATTTGTGGGATCTTAGTTCCCTGAAACCGAACCCTCTGATGGGAAGCACAGGGAAAACACTAATGTAAATAATTGTGGGTTTTTTTGCATAAAGATTTCCCTCAGGTCCCCAGCTCATTATAACCTCTCCCCATTAATATTCCTACAGCATTTACTATCTTTTCTGTCTACTTTCATAGATTTGTCCATTGAAAAAAGTGCAAGCAACCTAAAAATTAAGGGTTACATTTTATTAGGCGGATATTTTTGAGACTTCAAGCTTGGGAGATAGTATCTCAAGTAACCTTGAGAGAACTGCTCTGGAGGAGGCAAGAGGAGGAGCCAGGTTATATAGAAGTTTTGCAACAAAGTCTAAACATTGAAAGATTGTTGTTAATTAGAGAAAACCAGATGACCCAAGTTAAGGAATTTAGCTAGCCCTTTTCTGCCTGTGGGAAGATGCGAGAGTCTGGGCTCTCTGAAATCATTCCTTGGATACGCATCTCAGCCATCTGGGGACTGTGTCTGTGTTTTTCAAATCCTGAGCTTCCTCAGGGCTCACCGTAGGGAGTAGCTGTAGTCTGATGGTTGCTAAATGTCAGGTATTTGCCTTCCTGTGAACCCTCAGGGCTCATGGCTCACACCAAAGGGCTGTAGTCACGGATGACTGTGACATCCTTGTTTCTTGATATGACAGGAAATATTCCATTTCTCAGATTCAACAGTTTTCTGTTTTGCTTTTTCTTTTTGGAGTGTCAATTATGTGCAAGGCACTCTTCTAGGCTTTTGGGAACCATCAGTAAACAAAGCAGAAATCAGCCCTCATGGAGCTTAGATCCTGGCAGCAGAGAACTTTATAAAATAAACACAACAGAGGAATTACAGCACATGTTAGAAGATGGTAAGTGCTGTGGACAAAAATAATGTGGAATCAGGGAGAATGAGAATGAAGGGCCTAGATGGTGTTTATTAGGGTCAGGACAACCCTCACTGAGAACATGACTTTTTTTTTTGATTGAAATTTAGTTAATTTACAATGTTGTTAATTTCTGCCGTACGGCAAGATTATTCACACACACATATATATGTACATTCTTTTTTAGAATATTCTTTTCCATTTCGGTTCATCCTAGGATATTGAATAAAGCTCCCTGTCCTTCCTCACTGGCTCAGTGGTAAAGAATCTGCCTGTAATGCAGGAGATGCAGGTTCAGTCCCTGGGTCAGGAAGATCCCCTAGGGGAAGGCCTGGCAACGCACTCCAGTATTCTTGCCTGGAAAATCCCCATGGAAAGAGGAGCCTGGCAGGTTAAAGTTCACTGGGTTGCAAAGAGTCGGACGCGACTGAAGCAATTTAGCATGCACACACTGCTATGCAGCAGTACCTTGTTGTATATCCATTCTGTATATTAAAGCTTGTTGTTGTTGAGTCACTTACTTGTGTCCAACTCTTTGTGACCCCCACAGACTATAGCACTCCAGGCTTCCCTGACCATAAACTGATGTCATCATGAAGGGATTTAGTGCTTTTTTAGATATGAAGAGATATAGGGACTGGGATCATGAACTCTGTTCCTGAAAATACCTAACTATCTAAAGACCTGCTTCACTAGATTCCCTGAAGCACAGCGTGCCTCACTCCACCCTGAACTCCCTTAGGGAGTGTTGAAACTCAACAGCTGCAGCAGCACAGGGTTCAATCTCTGTAGAAGTAAAGTGAAGTAAAAGTCGCTTAGTCAGTGTCTGACTCTGCGACCCCACGGAAGATCAGTTCAGTTCAGTCACTCAGTCTTGTCTGACTCTTTGTGACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCTATCACCAACTCCTGGAGTTTGCTCAAACTCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAATCTTTCCTAGCATCCAGGGTTCTTCACATCAGGTGGCCAAAGTGTTGGAGCTTCAGCTCCCTGGAATTCTCTATACAGTCCATGGAATTCTCTAGGCCAGAATACTGGAGTGGGTAGCTGTTCCCTTCTCCAGGGGATCTCCCCAACCCAGGGATGGAACTCAGGTATCCCACTTTGCAGGCAGATTCTTTACCAACTGAGCTACCGGGAAGCCCAGTCTCTGCAAAAGGAAATGGCAAATGCCCTTGTTGTTCAGTTATTGGCAATGCTCTTGGCAAGCACCAATTTGTAGTTGAAGTTGTCACACGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGCGACGGACATTAAAGCCCTTGGTGCGTCACAGCTCTTAGGTCTTGGACAAACCGTGCTACAGCTCTTAGGCAAATCAGTGTTACAGCTCCATTTGATTTAGAAGATAGCAGGAGAATCCAAGACTCAAAAAAAAGAGTGGAGGAGTACATGGGGCGGGTGGGAGGGGGGGAGAGAGAGAGAGAGAGAGCGCACGCGCACACGCACGCGGAGAGAGTCAGAGAAAGCGCTTTGGCTCCTCCTTTTATGTTTTTTTCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAGTGCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTCGGACCTTCCTTTGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACATTCCCCCCTCAAGAGGTGGGAGGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGACAGCAAGGGGTATTGGGCCTCCCCCTCTTACTAGTCTCAAGCCTCAGAGTCCTTATAGTGGTGTCCAAGGGTGTGTGATATTTTCCGTGGTCGGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTGGTTGACCTGGGCAGAGACAAAACAAGTTAGCCAATATTGACAGTACATGGAATAATCATAAGCATCATCAATATAGCATAACAAAGACTAGTAGGGGCATTAGCCAATTTTAAATTCACATCGCCAGGGTGGCTCAAGTCCCTCCTTGTTCAGGGATTAGAAGATATATCTCCTGTCTGTTTTGGAGTACAATCTCTGTCAAGCTGTGTTGGCTCTTTAGAGTTATCCTGAGAAATTTTATCCCCAGAAACCAGATTTTGGGGGTGTTCATTAGAATGACACTCATTGGTAGTCCTGAATAGGTATCTGAGAGCTCCCAGGGGCTCACAGGTGTATTGAGTGTCCTCTTCTGTTTTCTTCCACGGCTTGACTTGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCTGTGGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAGTTGAGCCTTTGGGGATCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCCTGGAGCATATAGTGGTGACTCTTCAGAATCTTTTGGGTCCTGGTTCATACCCCACAAGCATATATCCTGTTGGAATTGCCCAATGGCTATGGTATAAGACGAGGGGGGTCTGAACCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTCATAAGGACTAAGACCAACCTGTTCCTTAGGGGCAATGAGGGTGCGGAGGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATTGCTGATTTTAAGAATTGATTGGCTCTTTCTACTCTTCCTGAATATTGAGGCCTCCAGGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACCCCTTGGGTGACCTTAGAAGTAAGTGATGTCCCATTGTCACTTTGTAATGACCTGGGCAGACCAAATCTTGGAATGATTTCATGGAGCAGTTTTTTTACCACCTCCTCAGCCTTCTCAGTCCAGGTGGGAAAGCCTTCAATCCATCCTGTGAATTTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGTATCTGGGCGAAGTCCATCTGCCAGTCCTCTCCTGGGTAGGCCCCACATCGTTGGACGGGCTGGGCCAGCTGGGGTCTTCAAGCTCCTTAGGGGTTGTTTAATTGGCAAGTGGGACAAGAGGAGACCACCTGTCTTACAGTTGTTTGGAAGCCGGTTCCTCTGAAGGACCTTTCTAGTAATCCTTGGAGGGCCTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTCCAGGAAGAAAAAAGAGTCCCTCCTTTTGGAACCACCTCATATGATCTTCTTGAAAGCCCTCGCTCTTAGCTTTAAGAGTCTCGCCTTCAGTATATGAAGGAGTTTCTGGTAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGATGCTTGGTTCCCTCGTGCCACTTCAGTGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGTAGATGGACTGCCTCCAAGAGTTGAAGAATCTGATCACCATATTTGATTGGGGACCCTCAGGTGGTCAAGTGGCCCCTTTCTTTCCAAACAGCCGAATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCACACCCAGCTCTTCTTTTTCCATCCAGGACAAAGCTGCTTCCATCAGAGTACCAGATTTCCTCAGGATTGGTCAGAGGATCTTCTGACAATCCCTCTCGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAACAGTGACACGGGAGAGAGCCCTCGGGGGTAGGGAGGAAGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGATTTTCCATCAGCATTACTTGATATCTGAGGATTCTTTGATCAGATATCCATAAATGGCCTCTCCCATTTAGGAGTTGTTTACTTGGTGGCTGGTAAAAACAGTTAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCGAAGGCAGGGGGGCCAACCTCGGGTAGTTTGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATTCCAACCTTTGAGTTAACACTCCCAAGGATATTCCCTCTCTTTCATGGACATTAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGCAGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCCTCTGCCTTCTTTTGCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCATGGTAGGCTGCAGTC TCONS_00181574 TCONS_00181575 TCONS_00181576 TCONS_00181577 TCONS_00181578 TCONS_00181579 TCONS_00181580 . 5' 14202 TCONS_00181574 TCONS_00181575 TCONS_00181576 TCONS_00181577 TCONS_00181578 TCONS_00181579 TCONS_00181580 . 5' 14202 EMBV3_27174 ACCATTGGGTGGTTGATTTCTATGCTCCTTGGTGTGGACCTTGCCAGAACTTTGCTCCAG Gene GeneID:613403|DNAJC10:NM_001099121:44_cdna Constitutive 0 NULL GeneID:613403 2 GENE DNAJC10 MGC152508 DnaJ (Hsp40) homolog, subfamily C, member 10 EMBV3_42584 CACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATA Gene BVT0101_018090 + 0 NULL GK000023.2:7086846-7102159 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117923 TCONS_00175509 TCONS_00118040 TCONS_00210913 TCONS_00226167 TCONS_00219592 TCONS_00040258 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00174808 TCONS_00174809 TCONS_00174807 TCONS_00132066 TCONS_00232829 TCONS_00022895 TCONS_00030963 TCONS_00078426 TCONS_00207934 TCONS_00174805 TCONS_00171428 TCONS_00175564 TCONS_00242416 TCONS_00207933 TCONS_00174806 TCONS_00118487 TCONS_00056149 TCONS_00125692 TCONS_00242415 TCONS_00001866 TCONS_00031759 TCONS_00110426 TCONS_00246741 TCONS_00001865 28 XLOC_072089 XLOC_105290 XLOC_072206 XLOC_129423 XLOC_137940 XLOC_132911 XLOC_024074 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_013565 XLOC_017212 XLOC_047314 XLOC_126448 XLOC_103815 XLOC_105345 XLOC_149080 XLOC_072644 XLOC_033952 XLOC_077234 XLOC_149079 XLOC_018004 XLOC_066330 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_28566 TCCCCCTTCCTGATGATGAGTGAGAAGTATTGAGAACTTTCGGGGTCAGTGCCCTTCTAA Gene BVT0102_043953 + 0 NULL GK000005.2:101542294-101581507 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196095 TCONS_00196089 TCONS_00196096 TCONS_00196093 TCONS_00196102 TCONS_00196091 TCONS_00196099 TCONS_00196092 TCONS_00196098 TCONS_00196097 TCONS_00196088 TCONS_00196100 TCONS_00196101 TCONS_00196090 TCONS_00196103 TCONS_00196094 TCONS_00196104 1 XLOC_118230 Coding TCONS_00196100 XLOC_118230 Coding Coding RIMKLB 5:101571342-101708466 j TSS145984 10099 1 TCONS_00196100_3 386 0.0547578968214675 7 0.926401843600271 4.00368933593728e-31 4.15038241131659e-19 3.15766477701114e-11 2.60143236486621e-71 3.75659675262481e-108 8.89162654776368e-104 1.6676873201986e-29 9.92347096637658e-24 1.2590734894409e-32 0.000255203002039601 5.97725455868365e-05 0.000158295710380011 6.1209011764297e-35 8.63770398833162e-34 1.24750253170932e-16 0.0291040996662608 0.00787542792660248 0.0236872425320402 6.11674164800124e-26 2.23041315694344e-29 6.30237211020243e-26 0.00433005699709335 0.00844120604749454 0.0107933885340349 6.64572721473532e-90 4.19001390556287e-31 5.2662771737608e-12 0.000566268203097798 0.000475859109311774 0.00229900175672313 XM_005207065.1 RIMKLB PREDICTED: Bos taurus ribosomal modification protein rimK-like family member B (RIMKLB), transcript variant X1, mRNA. 0.0 1.634e+04 100.00 0.896821467472027 XM_005253438.1 RIMKLB PREDICTED: Homo sapiens ribosomal modification protein rimK-like family member B (RIMKLB), transcript variant X4, mRNA. 0.0 7728 80.19 0.820675314387563 TCONS_00196100_3 sp|Q0VCE9|RIMKB_BOVIN RIMKB_BOVIN Beta-citryl-glutamate synthase B; 0.0 800 100.00 0.99740932642487 4 coding 1 1 1 1 0.00417654014020996 0.970188909604212 0.0102559267943043 0.84582673514511 GGGGAGTTCTGGTCTTTGGGATTGAGCCGCCCCATCTCCTCCCTCCATACTCTGCAATAAACGCTGTCCTTTCCCCTCACACAACTTGGAGGCAGTAAATCGACTTTGCTGCGGGACCGGCGAGCGGATCCAAGTTCAATTGGGAGGAGTCTATATTTAGGACGAAGTAATCCCAGGAAAGGAAGAACAGCAGATCAAGATGTGTAGCTCTGTGGCTGCCAAGTTGTGGTTCTTGACAGATCGTCGAATCAGGGAAGATTATCCCCAAAAAGAGATCTTACGAGCGTTAAAGGCCAAATGTTGTGAGGAGGAACTGGACTTTAGGGCTGTGGTGATGGATGAGTTGGTGCTAACAGTTGAACAAGGAAACCTGGGTCTGCGTATCAATGGAGAACTAATCACTGCCTACCCGCAGGTGGTGGTAGTGAGAGTACCAACCCCTTGGGTGCAGAGTGACAGTGACATCACTGTTTTGCGCCATCTGGAGAAGATGGGATGCAGGCTGATGAACCGACCTCAAGCCATCCTGAACTGTGTTAATAAGTTCTGGACGTTTCAAGAATTGGCAGGTCATGGTGTTCCTCTGCCAGATACTTTTTCTTATGGTGGTCATGAAAATTTTGCTAAAATGATTGATGAAGCAGAAGTACTGGAGTTCCCAATGGTAGTGAAGAATACACGTGGTCATAGAGGCAAAGCGGTTTTCTTGGCTCGAGATAAGCACCATTTGGCTGATCTAAGTCACCTTATTCGCCATGAAGCTCCATACCTGTTCCAGAAGTATGTTAAAGAATCTCATGGAAGGGATGTACGTGTCATTGTCGTGGGAGGCCGTGTGGTTGGCACCATGTTACGCTGTTCTACAGATGGGAGGATGCAAAGCAACTGCTCATTAGGTGGTGTCGGGATGATGTGCTCATTGAGTGAACAAGGGAAGCAGCTAGCTATCCAGGTGTCTAATATCCTAGGAATGGATGTGTGTGGCATTGACCTGTTGATGAAAGACGACGGCTCCTTCTGTGTCTGCGAGGCCAATGCAAATGTAGGTTTCATCGCCTTTGATAAGGCTTGTAATCTAGATGTAGCTGGTATCATTGCGGACTATGCCGCCTCCCTTCTGCCCTCTGGCCGGCTCACCCGGCGTATGTCCCTGCTCTCCGTGGTGTCCACGGCCAGTGAGACTAGTGAGCCGGAGCTGGGTCCCCAAGCCAACACTGCTGTCGACAACATGAGCGCAAGTTCCAGCTCTGTTGACAGCGACCCTGAAACCACCGAGCGAGAGCTGCTCACCAAGCTCCCAGGGGGCCTGTTCAACATGAACCAACTGCTAGCCAATGAAATCAAACTCCTGGTGGAGTGATTCCACCGGTAAATAATTAACCAACAAAAACCCTTGTAAAACTTTCTTTTTCTTCTTTCCTTTTTTTCTTTCTTTTTTCTTTTCTTTTTTAAACCAACTTGCAATGCTGTTCATGAAAGATGCTCAGGAAGATGAGAAAATTGAGTAGGAGTAGTTAGGAGGGAAGAAGTGGGAGATAGACATGATCTCTGCTATTTGTTACTTTTATTTACAAATGCTACAGATAGAGAGGCAGAAGAGGTGAGACACAGAAAAATGTCAGGCTCTTGTAGTTACTCTTTTAAGTTACTCAGAAATGTGTAGGCTCTCAGGCCATGAAGATCATAATTTTTTTCATGGTCCCTTTTGTTTTTGTACAGTTGGTACAAATTTCACAGGAGTGTAATTTCATATTGCATTTTAATGGATGAGGTAAACATCCACCTAAATTATAATTTTTTCTTTTTTAAAAATCTGAAAATTCAGCCTATACACTATTAACTAGCAGCTTTATCTTCATATTTACGAAATCCTGAGGGACTCTTTTAGCGACTTTTTTCAACCCTTGATATGGGTGGGAGGGCAACGTGAGTGTGACCCAATAAAAATTTCCTTTAATGACAAAATTGGCATGTTTGCATGATAAAAGGGAAATGAACAGTATTGCAATGTCTGGCACACAAAATAACATTTACTCCATTGTAGATAAAATTGCACTAGTTAAAAATATGTGCATTGACTTGTATTTGTTAGTGTTTTAGCCTTTTTTTGAAAGACATATGCTCTGTTAATGTTGCATTTTTTTTAATACATGCTAGTCTTAACATTCCCTGATCTATGCCTGCATCTTTAACAATGGCCAAAGTGAAGAAAATGCTACCTTTTTTGTTAACAAGACACTGACTTGAAACATGTGCATTTAAGCCTTTTATTTTTTCCTTTTTTCTTTTGGTGGTTGGGCATTTAAAGAATAAGGACAAGGAAAAATATTTTGGGGGGGGGGGCAAATCAAGGGCCTATAAGTTCCTGACTATAAAACTGAAGTGATTCCATCATTATTTATTTGCATTTTTCACATTTTAAGAGGGTGTTGTGTGTGTGTGCATGTGTGTGCATGTGCTTGCACACGCATGCATGTTTATGTGTTTGCTTTTTGTTTACACCAACCAATCAAAAAGAATAGATACTAGAAAATGGAGCATGATGGGAAACACAGTTTTTTACTTAAAAAAAAAAAAACAGTCAAGTTGTTTTCATAACTGTACTCTGCTGGGTAGAGGTACTCACCTGAAGATATGAGGAGAATAGATGCTTTTTAGGCTTTTGTGTATATGTGTGTTGTTTGCTTTTTTTCTTTGATTCTAGACTGTCCAGTGTATGATTTATTCAAGGCTACATGCTTTCCCTCTGCTTCTTGCTGTGCATTTTTTCCTGTTACACATAGATTTTGCGGTGGGGTAGACTGAACATTTTTTGTTTGGGGACTTAGCAGTCTCTTATAGCCCTAGTCTGAAGCCTTCAATATTCTCTTTATATTTCTTTATTTCTGAATTCATAAAAGCCCCCAAACTGCATATAATATGAGCCTTTAAACATGGGAAACTATTCCAACGAATGGTTTGGAAGGTGTGTTAAGAAGTAGAGATGATCCAGAGTTCAACGTAATTTTTTTAAGCAGCAAGTTCCACCTCCCTACAATCCTCTGAAGCTTTTTACCCAAGTCCTTTCTTGCCTCTCCAGTGCTTTTTTTCCTTCAGATGGACCTTAAACATAATTTCTTGGACACTTACTAGAGAGACTTCGAGGCAATAAGATCAGTATTAACCAGTTCTAACAGAGGTTTGATCATGCTTATTGTACAGTTTTTCCCCCATTTAAAAAAAAAAAAGGAATGTAATAAAATTTGTTTTCTTTTCCATAGAATTAAATAATATTAAAATGGAGTGAAAGGTTGATTGTTGACAAATAGAATAGTACCTCTAATCTGTGCAGTGTCTCATTTCACCTTAGTAAAAGATGTATAAGAGGAGTTTCTGGTTTACTTTAGGATATTCTAATCTCATCTAAAAGAATTTGACTTGTACCAGGTTATCGTGGGACATATTGTGGCATATATAAGTACCTCTGGCTCACTTGGTACTTGTTTTACTGAATGACCGTACTTTGAAAGATGCACACTATTTGGGATAGAGAACTGAAAAGGGAGAACATTTAATTAAATCATAATTCATACGTGTATAGAGACCATCTGGTTGCCACATAGATTATGACACATATACTTGGAATAGTTACATATCACATGTATGTAGGTCAGTGAATTTTAAAACACAAGTAGAATACCCTCTCTATTTGATGAAAAACTCAAGGTTTCTGTTGGATGGGATAAGGCACCAGGAAAGATACAGGTTTAGCCTTGTAAAAAATTATCAAATTGACCAACTGCATTAGAAAAAATATCTGAGATTATTTCACTGTTACTTTTGCTCACTGTCCATCTTTTGTGCATTCACACTCTATTAAAACATAGCCTTACCAACCTACTTCTAGATCATACACTCATATGTTAGAATGAGAAGGGCAAGGATGGTCATCTTAGAGTTAAAGAACACAAATGTCCTCTTGAATTCTCTCAAAAAAGTAAAGACTATGAACAAACCATACTGGAAGAACCCAAATAAACCAGCCCAGATATTTAAGTGAAAGTTAAATATATTTTCATATTGTTTAGTAAATTTCTTAAAATCTTTATTGCTATTATGAGAGTTAAAAATGTGTATTAACTAAATATGTATAGTTGTTATCATGCAAAAATCTGAATTATTGTAAAACTATTATATATTGTTAAAATTGTAATTCTGAATTGTATTTAAACATAATTCTTTCTGATATTGCTTTTATGTCACCCATGATGAAAAGCGGACTATATATATATATACACAAACATACAGATATGAACTATTCCATTTAAAAGTTTTCATAGTTATTTTCTTTTGATTGGTCATTTCTGCTGGCTTTAACTCCACTGAACTTTGAAATATTTCTGTATATGCTATCAAATAAGAAAACATCCTGGAATATTTAGGAAAAAAATCCATTGAGAGACTTGTTTTCATCAACCACTTTATCAGACTTTTGAGAAGGTATTGAAGACATTGAAAGAAGTCATTGACTTTCACCATCATCTCTTCTTTTTCTCAAGAAGAAAACAAGGAAAAAGAAATTCTCTTCCTTCAATGAATCCCCAGTTTGGGGTCTGGGGCGCTTAGAGACATTGTGAAATCCAATCTTGTGTTACATTTTTCTCCTGGCTCACTCACTCTTTTTGAGAAGGTTTATGGGCTATATGGCTGGTGAGACACGATCCCCTCCTAAGAAAATGTAGGTGCTCAGACAGGTAACCTCTGCTGCTACTGTTTTTATTTGTTTGTTTGTTTGTTTAATTTCTTTTAAAATTTGTTTTTGTTGTACTAGGATATTTTTTAATGTAATATATTGCAGGATTTATAACGAGGTACTGCTTTCTTTCTTTCTTTCTTTTTTTTTTTTCTTAAAAAACAAAACAAAACAAAATTTCATTTAAGATACATTTAGGCGCCTTTGAAGCTTGGATTTTGGAATGTTTCAGTAGTGGACAGAAATCTGCTGTTGGAATCTCCTAGTCTTCCAGGTTTAATTTGAAATGTTTTTAGTTTTGTTTTGGATTTTTGTGTGATATTTTATTTCCTTTATACCAATTGCCCTTTTGCCATGCTGTTTTGGGGTGGCTGCCTAACTCTAGTGACAGTTCTTTCTACATTAACGAAAATGTGGTGTTTTAAATTCCATAATGTTTTGCATTTTTTAAATTGTTTTTAAAGAAATATTCTAACTGCTTGCACTATTACTGTTCTTTGCCAGCCTTTTCAGGAGCCAAAAAAACAAAAACAAACAAACAAAAAAATACCCAGAGAAAAAACTTTCCTTCTTCCCCCTTCCTGATGATGAGTGAGAAGTATTGAGAACTTTCGGGGTCAGTGCCCTTCTAAACTCCCCTTCCCCCAATAATGCAGCTGTAGAGTGAATGGTAAATGCAGCGGTTTGGATTCAGGCACAACCCCAGCCTGCTGGCAGGTAATTTGATTCTCCTTTTTTTTTCCATCACAAGGCTAACCTTACTTTCTTTTTAAAAGTTCCTTTCTTTATGTACTTTGAAGGCACCCATGGGTTTGTAATTACTTTTGTTTCAAAAAACAATGTGTAAATTCATCTAGCAAATAATTTACTTATAGAAAAACCTTTGGGGGTAAAGTTTGAATTAGTTGGGATGAACTCAGAACTTTGGGGATTTGCTTTAGCCATTTAGATCTTTCCGTTTCTTGCATATACGTCTATGATTATTTCAGAGTGTGACTTTTTTGGCTTTGTTTTTGTTTTGGGTTTGTATGTTTCTTCCATTGTGCTACTCTGGCTTAAGCTTTTTCAGAGGTTGGTGTTCCGAATACACAGTGAGCTCACAGTATAAAGACATCAATTAGGAGTTGACAGGTATGGAAAACTAGAGTTTTGAAAAGGTAAAATTAGGTTCTAGGTTATATATATGGTAAAAACTCACCATAGCCCTCAGTTGACCTTAGTAGTGCTTCTCTTTCTCTGACTTCATTATAAAAGTGAAAGGTAATGAGACCAAGATAATAGAGAGTGTTTATTTCAGGAGCAGCATGATTTCAGAACAAATGATTTTAGTGTTTCTGAAACACTAGTTCTCACAAAGAGGTAGATGTCAGCAGACATCATAAAGTAATAGTTTAAACATTCAAAAAGTTATAGGTTGAATAGATTGGAGGGCACTTCTGAAGCACAAGATCTTGAAGCAATTTATTAATTCCATGAAGTAAAGTTAGTGGCAGAAACAGGAATATAACTTAGCCATTTTAACATCCTTCCTGTTAGTTAATATACTATCCCCTCCTCTGTCTATCCCAGTCCACCTATCCTTTTCCTTCTTTTCCCTGTCCTTCCTGAAGTTTCAGCTCTAATATGAGTTTTGGGAGATAATCCTCTATCTGATAGGTAGGATTTTAGTGGCAGAAGTCAGGACCTTTCCAAACTTCTCTTTGGATGTCCTATCCAAGAAGACTGTTAAGTCTGATAACCCTCCAAGTTAGTGAATAGGGAATCCTGGCTTGTAATGTGGTTTCTACTGCTAAAGGCATATAATAAGTTACTAACTTGTGCTTCAGTTCACTCCTGTGAGGTAGGGATAATCATTCCCGTAGCATCTTAAGATTTAAAATATTTATCTCTTGAACTGAAATTTACTAACCAAGGAATCCCACTGCACTCCTGCAGTAATTTATGATGTATACTAAATAGGCTTGAATGGAAGGACCTTGTTCTGTTGCTGATAAGAATGGCCAGCATTAGAGTGTATGCACTGTGTGATTACTTCGAACGTGGAGGATTTGTGAACCTCCATTCTGCTGCCTTCCCAACTTCCCCCTCCCTGAAGATCACTTACATGTTAAGAATGATTATTTTCAGATTTACCATATTCAAACTATATTAGATGGTCCTTATATAGCGTATATACCTGGCTGCTGTTGTGTGGTTTGGGAACATGAGGGGTGGGGTGAATTGTTGTTGTTTTAGGTTTCAGTCAGACAGCCATCCCTGTGCCCCAGTTCCCAGAAGCACAGCAGGCCTCTAGAAGCATCCGTGGGAACGGCGCAGTCCTGACATCAGCAACTCTCCTGCTCAGGCTCATCCCATATACAGAGGTCAAAGGGTGGGGCTTGAGATGGGGGAAGGAATGAAAAAGCAGAAACAATGTCACTGCAGTGCCACTGTTGACCAGCCTTTCTTTAGTGCTTATGTCAGTGTTTGCTTTATTTTTTTTAAGTTGACCAAAAAAGATTTTACTTCGGGAGTAAAGGTAGTGGGAGGGTGGAACAAAAACATGCCATTTTTACTAGTTCATTATTATCACTAGCTCATTCTTGCATATTGTTCTTCAGTAGCTAATAAAGAATAAATGAAACCTAGACCTCAGTAATAAGGAGAATGCGAATACAAGTGAATCTCAGGATACTAAAAAAGAGAAAAAGCATTTTTGTGGTATTAATTTCCAGTTCTACAACAGTTATTACATTTGTCACTGTGTCTCCCTTTTTTTGCCCTAATTCTTCTATGTATGTTTACAGTATGAGAAAATGTGCCTTTTTTTTTTTTTGGTGGTCCTTTTAAAAAGACCTAATGAAATTACTACTCTTTTGCAAAAAAATATACACCCATTGCTTATATGGGCATACAAATGCTACCCTATTTTAAATGTAGGTGGCGTATGTGTTCGTGTTTTAATGTATTCAGAGCCATTGGGCAATAAGCAGTCCAGAACATTGAAAACTCAAGCAGGTAAAGCACCTAACACCCTTAGTTTCTAGAATTACTTTTAAAAACTCCTTTATTGCTGCATCTTCCATGAGTCTTTTGGTAGTCTCTGAACTTAAAATTTGCAGGAGTTGTAGACTACCTAGTCAAAATGTTAAGTTATGCATTTATTATTTGTAGGGACAGGTGAAGAAGAAAAGTTAACAGACAAGAAATGGCTCCTTGAGATGGCAACTGCTGAGTGTCTGAATCTCTCCCCCTCCCCCTCCCCCAGCTCAGCATGAACATTGATCATACCTGTTTTGATTTTCTGTGATTGGGATTTTTGTTGTTTTAACTTCTGGCGGGGAGGTTTCAGGGAAACAGGAAGTTCATGCACATGTGAAAATATGAAATGTTAAACAAAGGAAGCTTTCTCTTTAATGTGACTAGTAAGCGAGAACCTTTTCTATATACTCTTCTGCTGCAGCAGAGAAATAAACTGGTAGGTGGCAGCAGAAGAAAGAATTCTTCAGATTGATGGCTACTGGCAGTCTGCATAGGAGAAGAGAGAGAAGGTGACATACCATGTCCAGCAACAGGGCAGAAATGGAAACAGGACTGCAATTGCTGATCTTGACTCTAAAATGGTTCTTTTGGTCTCACAGAATGGATGAAGATTGATCTTGACTGGATACTTTTTCAAATGGAGGATAGAAGTAACACAAAACAAGGCAACAGTAGCTCTCCAGTGTTTAGTTCAATGTGCTTTATTTCTAAAATAAAAACACCAGAACTGGGAATGAAACAGCATGGGGTGTAATTCATTCTTCTGTCAGTTATCCCTGCCCACTGCATTTTGTGTGAATTCACTTGAGTCCGTATTTCTAGGTTTGTTCCACATGGGTCATTCCTTGTTTCTCTTCTTCACTTTTTGCAAGCTGAAACTCCTTGGTTCTTGACAGACTGGTCTCTGTATAATATATTCTGATATGATTATTACTTTTGGCAGAAAGACAGACACTAAAATATGTATTATGTGGAATTTCTCCTACCCCTTTCATCTCAGTATATCTGTCCATGCTGAATAATTGTTGCCATGTTTTTGTCTCTGAAGAAGTGCAGCCTTTTTCCTATTATTCTGACAAGGCTCTGGCACACACCTGTCATAGCACTGCTCACTACGTTTTAATCTTGTGACTGGAGACCATGTCTGACCTAGTTTATTTAAACTGTAGGGGATCTGATAACATACATGTATACACAGAGGCAGCTATCATACTTTTGGTAAAGAATGGCCTTTGTATTTGATACAAATTCTGATTTCATTACTTACTGTTTACATGGCCTTTGATAAGTTACCTGCAAGCCATAAAGGAGTGTTTATAAGAAAAATGGAAATAATTGTACTTGCTTTACTAGATTAATGTCTAAGTAGTAGCTAAACTATAATACATGTATAATTCTTAGCATATAGTTGAGTATTTAATAAATACTGTCCTTGAATTCTGTAAATTTTGGTTATTGAAATCTTATTCAAGACCTGCTGAATCTGAATTTTTCTTGATTTCCTTTCAGTTTTATTATTTAAGCTCCTTGCACATGATCTTTTGGTTGGATCACTATGTGTGTGCATATGTGTGTGTGTGAGAGATTTCTCAATACAGACAGGATTATTCCGTATTTCCACATTTCATTGGCTAAGGAATTTCATATTAAAAAACAACAACAACAACTTTTATCTTGGGACTTCCCTGGTGATCCAGTGGATAAGACTCCCAGTGCAGGGAACCTGGGTTTGATCCCTGGTCAGGAAACGTAAGATCCCACATGCCAAGACTAGGCCCAAGTGCCATAATTACCGAGCCTGCATACTGCAATGAAGACCCATTGCAGCTCAGATAAATTAAAACACAAAACCCTTTTATCTCCCCCCCCCATTAGCTCATAACAAAAATATTCTTTTCTTTGGATTTGCCTGGTCATCCAGTGGCTAAGACTCTGCACCCCCAAAACAGGGGGCCTAGGTTCCATCCCTGGTCAGAGAACTAGATCCTACATGCTACAAGTAAGAGTTTGCATGCCACAACTAAAACAAAGCCTACATGCTGCAGCTGGGACCTGGCACAGCCAAAAAAAAATTTTTTTTAATGTTTTTGTTACATGCAACCAAAGAATTCTACTAATGATACAGGGAAGGAGACTGAAGGAAGAAAAACCTTGATAGATTTTTCTTAGGGTAACCAATTGAAAAGAATTTGAGCATAAATTCAACCTTGCTAGAAGAGCTAGTATTTTCAGGGGGGAATATGTATACTAATGGTAAAAAATGAAGCACAAGCTGGAATCAAGATTGCCGGGAAAGAGATCAGTAACTTCAGATATACAGATGACACCACCCTTATGGCAGAAAGC EMBV3_23910 GATGGAAGCTATTTACCTGTGTCAGCGTGCCTGCTTTTTGTCTAGCTTGGTTCCTACTAG Gene GeneID:506005|LOC506005:XM_002689601:2_cdna UTR3_Alt 3 NULL GeneID:506005 8 GENE LOC506005 NULL similar to KIAA1432 EMBV3_01830 GCCATGACTCAGTGGTTTGTCTTGGAGTTCCTTAATTACCAGCAGCAGATTATCCCCTAG Gene BVV0102_327328 - 1 EMBV3_28043 GK000001.2:84827426-84946742 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30994 TTCCGACCTGGGGCGCCGGTTGGAGACATGATTGCAATGCGGGCCTTAGGATTTGAGCCG Variant GeneID:505789|CETN4:NM_001038039:14_cdna 119^259 1 EMBV3_10968 GeneID:505789 17 GENE CETN4 MGC133758 centrin 4 EMBV3_32203 CAGAAGAAATGGCTAAAGCTGAAGGAGGGGGGAGGTGGAAAGTCAAGGATTCTCGGAGCT Variant GeneID:509038|IL20RA:XM_002690260:44_cdna 82^219 1 EMBV3_08121 GeneID:509038 9 GENE IL20RA NULL interleukin 20 receptor, alpha EMBV3_11331 GCCCAAGTGAAGCCCTGCTCCTTTGCTTACTCAGCTGCCCATCAAGGATGTGATTTTTAG Gene BVV0102_280075 + 0 NULL GK000030.2:108326176-108331466 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245421 TCONS_00245426 TCONS_00245422 TCONS_00245424 TCONS_00245425 1 XLOC_150715 Coding TCONS_00245422 XLOC_150715 Coding Coding CXHXorf38 X:108305448-108327530 = TSS184226 2876 1 TCONS_00245422_2 311 0.113004172461752 7 0.870069290340111 0.00150349652148213 0.00106385384878976 5.44272851332105e-05 9.75436775134424e-05 8.87414029429295e-13 4.54362750205158e-05 1.04066276256593e-07 0.00103760679956655 6.12375585163744e-11 4.53450457807289e-11 2.23169668065873e-11 2.8552091704793e-11 4.37242202810188e-05 5.13836617245477e-09 9.20994980311956e-17 0.00273101552954924 4.23654641521744e-31 2.20149689602939e-08 0.000594286721428718 0.00202166621812742 0.000553273529836684 0.000708677115557772 1.85102170730335e-05 0.000922977556484974 0.000234838814257228 0.00104614531271404 0.000473673055099721 9.12864034886534e-11 6.40362664049733e-12 1.01723672946117e-11 XM_002700210.3 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), transcript variant X1, mRNA. 0.0 5187 100.00 0.999652294853964 NM_144970.2 CXorf38 Homo sapiens chromosome X open reading frame 38 (CXorf38), mRNA. 0.0 1393 87.31 0.39221140472879 TCONS_00245422_2 sp|Q8TB03|CX038_HUMAN CX038_HUMAN Uncharacterized protein CXorf38; 0.0 563 87.82 0.993569131832797 1 coding 1 0 0 0 -1.91474452713663 0.0197142264431848 -0.004306203625864 0.93083812780767 TCCCAGGCTTCTGCGCCTGCGCACCGCAGTTCGCCCCGCCCCTCACCCGGTAGCCGCGCTGGCCAGGTCTGGACATGGTGCTCTCTGAGCTGGCCGTGCGCCTCAACTGCGCCGAGTATAAGAACTGGGTGAAAGCGGGCCACTGTCTTTTGCTGCTGCGCGGCTGTTTGCAGGGCTTCGTCGGCCGCGAGATGCTCGCCTTCCACAGCAGGCTGCTCGCCGCCGCCCCCGGCCTGGGCCCCCGCGCCGCCTGCAGCAGCGGCTCGCGGTGCAGCCCTCGCGCCCGCCAGTTTCAGCCTCAGTGTCAGGTGTGCGCAGAGTGGAAACGGGAGATTTTGAAACATCACACCAACAGAAATGGAGACGTCCACTGGGGAAACTGCCGGCCGGCCTTCTGGCCGGTCGACGCCTGGGAGGTGGCCAAGGCCTTCATGCCCCGAGGACTGGCAGACAAAACGGGACCCGAGGAATGTGACGCAGTTGCTCTTCTGAATCTCATCAACTCCTGTGATCACTTTGTGGTTGATCGAAGAAAAGTCACAGAGGTGATTAAGTGTCGTAACGAGATCATGCACTCTTCAGAGATGAAAGTATCTTCTGTATGGCTACGAGATTTTCAGATGAAGATCCAAAATTTTCTAAATGAATTCAAAAATATCCCAGAGATTGTGGCGGTATACTCCCAAATAGAACAGCTGTTGACATCTGACTGGGCTGTTTACATCCCTGAGGAAGATCAGCGAGATGGGTGTGACAAAGGAGTTTACCTGAGTGAGAGCCAAGTAAACGAGATAGAAATGGAATTACTAAAGGAAAAACTTCAAGAGCTCTATCTTCAAGTAAAAGAACAAGAGGTGTTGCCTGAAGAGATCTTAAACCAACTGGAAGTGGTGAAAGAATTTCTAAGAAACAATGAGGATCTTAGAAATGGTCTGACAGAAGATATTCAGAAGCTAGACAGCCTCCGTCAACAGCATCTAAAACCAGATTCAAAGGAACCTGGGGTGTAGACACCTGGAGGGAAGGCCTGAGGTCGACCTTCCACAAAGATCAGGCGTGTTCTGTGAAAGTCGCCCAGGCTTCCATCTCAGGCATCCTTTTCTGGGCAAAAGGAAAAACTATTCTGAGTACTCCACTCAAACAAAAAGGGATTTGTGTTGTCTTTTCCTGGACTTTCCTTTGACTCTTCGGGAGTATTTTTTTTTTTTTTTTTTTTTAACATTCACAAGCTTCGTGGTGTTATCTGTACCAACCAAAAAATATTAGATATTCTTGTACCAAACTTGCTATCATCCAGGGTTTTTTTTTGTTGTAGTTTGTTTTTCAGGTTTTGTTTTTCACTTTGTGTTGCTGTTTAAAAGGTGACATTCTTTTCTGGTCCTAAAACTCTAACTGTTTCAACAGTAACTAGACTTGTGTTCAGCCAGGCCTGTTGTGAAGGGCCATGCCGAGTTCTCTGCCCATTGGCACACACACTCTTGCCTCAAAGTCTCAATCATGAGGATGCCCATGGGTGGGCTGTGATGTATTGATGTTGAGATAGAAATCCTTCCTTCTTGCCAGCATTTCCAGTTAGTACAGAACTGTGAGTACCCGTTTCTGGTAGCCTGAGACGGTAAGACAGAGAGCTGGGCTGAGAACACAGTAACTTGACTGACAGCTTAGGGGGAGGGCCCAGGCTGGTATCACAGCTCTTTCTGTTCAGTTATTTCAAGTGCTGAGCGCAGGGTGTGGTCCGTGTGTGCTTGATGAATATTCCTTAACAGAAGGGTCAGCTGATAGTGTAGAGGTATTCATAATGTAAATATTCATTACATTGTTGACCAAGCCTGGTCCTTTGTTATGAAATTTAAGGAGGAAATTTGAACATTCTTATGGAAGTTCAAAGACATCATTTTCTTTCAGCAACTTCACAAGTTCACTCTGTTCCTCTTACCCCAAAAGTCATCCACTTTCAGCTTTGTCCTATTTGTTTCTTGAACTGCAAACCCCTAGCCTGTTGTGTGCAGTGGTCTGTGGGATCAGCTTTACCCTCACCTTCCCCCACGTCTGCTCATCTCCAAAGCCAGTGGGCTTCCCTTGTAGCTCGGCTGGTAAAGAATCTGCCTGCAATGCAGGAGACCCCGGTTTGATTTCTGGGTTGGGAAGATCCCCTGGAGAAGGGATAGGCTACCCACTCTAATATTCTTGGGCTTCCCTGGTAGCTCAGATGGTAAAGAATCCACCTGCAGTGCAGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCATGTCTGGAGAATCCCCATGGAAAGAGGAGCCTGGTGGGCTACAGTCCATGGGGTCGCAAAGAGTTGGAGATGACTGAGCGACTAAGCACAAAAGCACAGCGGTGCCGAGCTAGGCCATGTTGCCCCCGGATCTTCAGGAACAGACTTGCCACGTTCCCCACTGCCTGGAGAAAGTGCTTCCAGTCCGAGCCCAAGTGAAGCCCTGCTCCTTTGCTTACTCAGCTGCCCATCAAGGATGTGATTTTTAGGGAATGGGGGTGGGGGATATATTTGGTGAATTTTTACATTAAAATGCATCGAATGTAATTGTGTAAAACCTGGATGAATGCACATATGCCTGTAACTTCCTGCTTTCATCTTTCATGCTACTATTTGGTCTTCAGTCTTGCTTTTTCTTTCTCCCTTCATTTCATGGAATACCTTTAGAAGACTTCAGTAATACAGCTGCAATTTTCTTTCATCTTGCAACACCCCACAACCAAACTAAGAAACTTCATGAAATGTTTCATAGTTTCTAGATATAAAGTAGTAAAACTTGAGATCAAATAAAATCTTGATTCACTAACCAA EMBV3_15100 TGCTGCCGCTGCCGCGGGGCTGCGGAATCGTGAGATACATGTTTATTCAAACACAAGATA Variant GeneID:615964|NFU1:NM_001046566:74_cdna 64^164 1 EMBV3_37511 GeneID:615964 11 GENE NFU1 MGC127922 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) EMBV3_38523 TTTAGAGCACCAGAGGACCCCCAGGGTCTCGCAAGGATCAAAAGAACCAGCTGAGGGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15787 CTAGCGAGCGAGCGGGCGGAGGCGCCGGCGCCAGTTTGAGCCAATAGTTTCTCTTCCCGA Variant GeneID:100336744|LOC100336744:XM_002694685:265_cdna 268^430 1 EMBV3_41060 GeneID:100336744 17 GENE LOC100336744 NULL RAN binding protein 1-like EMBV3_36149 GGGACGAGAGAAACTGGGAGACGGGCCTGATGCACAGACGCTGCTACATATAAAAGAGAT Gene BVV0102_029097 + 1 EMBV3_43537 GK000010.2:101070358-101186185 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08014 TCTATGCTCATCATCACCGGTCTGGCCTACTTCCTGCTGAGCAAGCGGAAAAAGAGCAAA Gene GeneID:513137|TMEM72:XR_084104:147_cdna Constitutive 0 NULL GeneID:513137 28 PSEUDO TMEM72 NULL transmembrane protein 72 EMBV3_24308 TATTTTACCTACGGACCTTCCTTGGATTGCTTACCACGAGAGGACGTGCCAAAGGCGGAC Gene BVV0102_049265 - 0 NULL GK000027.2:27833471-28120634 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155385 1 XLOC_094705 NonCoding TCONS_00155385 XLOC_094705 NonCoding NonCoding LOC100847523 27:27855001-27857056 = TSS116264 2013 2 TCONS_00155385_5 99 2 0.0209347614410905 9.65558500625891e-07 6.15651119232451e-06 2.29856127750047e-06 1.30224024638885e-05 4.49651646205786e-06 3.40304952013271e-06 5.06978803247979e-06 1.26829100780768e-05 8.92794759068085e-06 7.38096949724302e-07 1.46888387412397e-06 9.4302162005577e-07 1.78171884403477e-06 2.92101213867277e-07 9.02012198344083e-06 8.52832570637558e-05 0.000144675399780274 4.11771545627217e-06 1.18743643700317e-06 7.50223250225379e-05 1.69656627536148e-06 6.94121840562786e-06 6.07654577494534e-06 6.39288377701795e-05 0 5.83331299134145e-07 0 1.51667468269498e-06 1.80872311975813e-05 1.13671202325404e-05 0 noncoding 0 0 0 0 0.0928067186094821 0.417322194334633 0.0324004608656697 0.490588591752522 TTTGCTTTACTGTCAACAAAAATAGGATTAAGATGGGTCCGCCTTTGGCACGTCCTCTCGTGGTAAGCAATCCAAGGAAGGTCCGTAGGTAAAATACTTGAAATAACTGCTAATCCAGGAAAAGAAGAGAATTTTATAAAATATTGTAGTCCCATGTCTGTCAAGTTGGGCTGGAGGTTTACTTAGGTTCCAAGCGGCCTCCTAGGAGCCATGGGACAAAGTGGGGAGATAGGTTAGCAGGGGGTTCAAAATACCAGCCGTGAATTTAAGGAGAGGGACTCTGTTGATTGCAAGTAAATGGAGTCTATTTCTTCACCACATCTCTATGTTAAAATCCAAAGGAAGAAGGGACATGCAAAGAGATCTTAGAAGAAAAGTGCAGGCTGAGCGTGAGTCATGTCATCGAGCTCCTAAGTGTTTCTACAGTTCACAGACAGCGTCTATGGGCCCTTGGCATTTCGTATCCCAAGCGTCCTTCATGCTTCCATGCCACTTTCTCTGTGCTCAGAAGTGTCCTCGTGTGCTTGTTCACCTTTCCAAAGGAGCCCTTGACAACTCCCCAAGTTGCACTGATTTCCCAATTCTGTAAAATCAGTAAGCTCACAGCAGGGGAAAGAAAAGTCAACCCCAAGAAGTTCTCCAAATTATTCTCAATTGCCTTTGAAGACCTGGACTCCTTCTTAGGCTATTTCAATTTAAAAAAAAAAAAAAAATCCTACCATAATTAAAACTCTAGAATTTTAGTTTCAAATTCTTCAGGCATGGGAGTGTTGTTCTGAAGAATTTCAGGAATAAATAAAATCTTTGATCGAGAGCAAGAAACAACATGTTCCTCAGTATGAAAAATCTCTGTCAATTTTCAGGTTGCAAAAACAGATGACAATTGAGGACAAGAGGAAGTTTTCTTTCCAACTTGGTTCTGGTCACTCATCAAGGTGACATATATCAGTTAGGACAGGCTTTCTGTCCATAGAATGATAGATTTCCTTCATAGGAAAGGCCAGCAGGCTACTCGGGGCTCCCTGCTGTGGCCACCAGATTTGTGTCCACAGGGGCATCTCTGGGATTGGCAATGCAAAGAAAGCATGTGAACCAACATTCCCAGCCTAAGGGAAGCCTCTCTGGGTCTTCAGATGGTGGAAATTGCTGAGACGTTTGACAGTGACTTTGTTTCCTGGGTCTGAGATCATGTCCCATTGAGGAAGATGCAGGGGAGAGTAGAATATGAAAAATGCCTTTTTATTACTCTGGGTTCCTTTCACGTCCTGCTCTCCCTCCTTGCCTGGTAGGACTTTTATTTCTGAGAGTGTCTGGACAGTCTCCTGCTTTCTACAAAATGGCACTCTGCCTGGGAATTTGTGAATGTGTCCCAAAGACCAATATGCCATATCTTCCTTAAGTGTGACTGTCATGATAGAGTTTATCCAGGGTCATTTGCTCTGTAACTTTTTTTTTTTTTTAGCCTGGGTTGAAAGGTATATGGCTCACATTGGTAAAAATATAAAATACCTAGTTTTTTTAGTCCTGGCTGCATCCCACCAGCCACAAAGATGTCTATCCACAAAGGCCCATGAAACATTGCAGAGAAATGCAGACAAAAGGAAATGGCCACATATCACAAGTTCTCTTATATATTCTTTTGTAAATACACATTGTACATGACTTGGATGTGTTCCTAAATCATTTACTGTCTTTATGAGTTCATGTCAGTTTCTTTTTTTTTTTAACTCTTAACTTACTGTGTAACATTGTAAATAACATAATGTCCTTTATTATTTATATTTAAACATCTAACATAGAGTTGTTTTCATATAAGTTTAAGATAAATGTCAAAAATATATGTTTTTTGGTTTTTCTTTGCTTTAAAGTTATGTATCTTTTCCTTTTGCTTTTTTTTTTTTAAGAATAATTTATTGTTCAGGAGAAAGAATGTATATGTAACTGAATCTATTTGAAGAATGCACATTTGAAGGCCGTGAGGTACTGATAAACTAAAGAATTTATTATCCAAAA EMBV3_20977 GAAGCTGATGTCCTTGGCTTACACGTTGCTCACACCTCTGCTGAATCCACTGATCTACAG Gene GeneID:785565|LOC785565:XM_002693067:381_cdna Constitutive 0 NULL GeneID:785565 15 GENE LOC785565 NULL similar to Olfactory receptor 10A3 (Olfactory receptor OR11-97) (HTPCRX12) EMBV3_42538 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27954 ACAGTGTACGTGGTAGAAGACCAAAGAAGGGATGACCTGGGCACATCTACCTGCCTCACA Gene GeneID:777789|C7H5orf32:NM_001078164:41_cdna Constitutive 2 NULL GeneID:777789 7 GENE C7H5orf32 C5orf32 MGC134074 chromosome 5 open reading frame 32 ortholog EMBV3_21034 AGCCCCTGGTTGCCTTGGTGGGCAATAAAAGTCTTCCTGTGTTTTCAGAAAGTTGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13498 TGGGACTTTGCACCCAAACAGAAGTGAAGAGACAAAACTGGATGAAGTTGATGGAAAACC Gene GeneID:100300765|LOC100300765:XM_002692698:95_cdna Constitutive 0 NULL GeneID:100300765 14 GENE LOC100300765 NULL hypothetical protein LOC100300765 EMBV3_25049 GTTTGGCCAAGCCATCAACCTATTGCCTGAGAGGGCCTCAGCCTACAATAACCGAGCCCA Gene GeneID:510592|TTC36:NM_001040515:101_cdna Constitutive 0 NULL GeneID:510592 15 GENE TTC36 MGC127992 tetratricopeptide repeat domain 36 EMBV3_24831 CATAGAGAACTAAAACCAGTAAGAAAAAGGCAAATGATGCAATAGAAAAACGGACAAAAG Gene BVT0101_062401 + 0 NULL GK000015.2:32165577-32206558 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18185 CACTTGGCTATATTGCAAGACATAATGCAGCTTTCTCAGCTGATAGTGAACGCTGGGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35096 AAGCCATTTGAGTGCTTAACATGTGGAGTTGCTTGGGCTGATGCCCGATCTCTGAAACGC Gene GeneID:538545|ZBTB11:XM_002684723:42_cdna Constitutive 0 NULL GeneID:538545 1 GENE ZBTB11 NULL zinc finger and BTB domain containing 11 EMBV3_19133 TTCAAGAACCCCAAGTTCAGCATTCTCACAGTCCGCAATGACATCACCCTGCTGAAGCTG Gene GeneID:504241|CTRB1:NM_001105330:76_cdna Constitutive 0 NULL GeneID:504241 18 GENE CTRB1 CTRB2 MGC157376 chymotrypsinogen B1 EMBV3_02148 CAAGGCATTCCTCTTGAATATTTGGAGAAACTTCACTATAAGCATGAAAGCTGGCTCCTG Gene GeneID:530642|DCK:NM_001034573:80_cdna UTR3_Alt 2 NULL GeneID:530642 6 GENE DCK MGC127248 deoxycytidine kinase EMBV3_02988 AAGGCAAAGACCGTTACCCGAATAATGAAAACCAATACTTGGCTTCAGTGTAAAGAACCG Gene GeneID:518487|MMP27:NM_001099007:23_cdna Constitutive 0 NULL GeneID:518487 15 GENE MMP27 MGC159975 matrix metallopeptidase 27 EMBV3_14456 GAGAGGGTCCTCCCAGGAGCGCCTGAACAGAAGCATCAGGTCCATGCTGCTGCTGGCTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26378 TTCGGCCTGGGCCTGTCTCCTCTGCTTCACGTCTTATGAGGAGCGTCTCCAGATTTGCCA Gene GeneID:100337253|LOC100337253:XM_002695249:220_cdna Constitutive 0 NULL GeneID:100337253 18 GENE LOC100337253 NULL NCRNA00085 protein-like EMBV3_25301 GCCCAGGTGGATGCTGAAGAAAAAGAAGATCTGGAGAAGATGAGGAACATAATTCCATTT Variant GeneID:282710|ATP5H:NM_174724:332_cdna 350^412 1 EMBV3_07734 GeneID:282710 19 GENE ATP5H MGC128531 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d EMBV3_08347 AGATTCATGTTCCAGCTTCTGGCCACCCCATCATGGAGGACTCTCTGTGCTCCTCAGAAA Gene GeneID:509874|GTF3C1:XM_002698045:17_cdna Constitutive 0 NULL GeneID:509874 25 GENE GTF3C1 NULL general transcription factor IIIC, polypeptide 1, alpha 220kDa EMBV3_10511 GTGTCAGTCCCCTCTCGGATTTGACAGGTTCAGGCTGCACAAGGATGACAGAACCAATGT Gene GeneID:100336717|LOC100336717:XM_002699684:8_cdna Constitutive 0 NULL GeneID:100336717 X GENE LOC100336717 NULL killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 5A-like EMBV3_28115 CCAGCAGCTCTACTATAAATCCTACTTCCTCTTTGTCTTTGGCATCGAGTTCCTGGGCCC Gene GeneID:282431|PROKR2:NM_174640:17_cdna Constitutive 0 NULL GeneID:282431 13 GENE PROKR2 GPR73L1 prokineticin receptor 2 EMBV3_37161 CCAGTAGCTCTGTTTTTGCATGTTAGGGTCAAATATGCATCTGTAATGCATGTGACAGTC Gene GeneID:785666|LOC785666:XM_002692177:100_cdna UTR3_Alt 2 NULL GeneID:785666 13 GENE LOC785666 NULL similar to Uncharacterized protein C10orf18 homolog (Peripheral benzodiazepine receptor-associated protein 20) EMBV3_23791 TTTAATTTCATGGCTGAGGTCACTGTCCTCTGTGATCATTGTACTTAGTTTAATATAAGT Gene BVV0102_267352 + 0 NULL GK000030.2:130933030-131063458 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23452 TCATGAGCCCTGCTTTTCACTTCCGACCCCACAAGTCCCACCTTTAATTCCGTGATCCCT Gene GeneID:540236|TUBB4:NM_001034697:87_cdna Constitutive 0 NULL GeneID:540236 7 GENE TUBB4 MGC128386 tubulin, beta 4 EMBV3_19836 AGGTGCTGGAAGCTGACGTCCACCAGCGCTCCATCTCTCCCTGGAGATACCGTGTGGACA Gene GeneID:617538|IL17C:XM_002694857:806_cdna Constitutive 0 NULL GeneID:617538 18 GENE IL17C NULL interleukin 17C EMBV3_32719 TTGAATCTGCTAGAGCACTGCTTGTGTCTACGGGGGCTGGGACTGCCTGCTTTCTGGACA Gene GeneID:789553|LOC789553:XM_002686594:63_cdna Constitutive 0 NULL GeneID:789553 3 GENE LOC789553 NULL similar to Uncharacterized protein C2orf54 homolog EMBV3_00680 ATTACCTTGTCTGGGAAATCGTCGTGTCCATTGGGGCTTCCTTGGTGGTCCAGTGGTTAG Gene BVV0102_440847 - 1 EMBV3_00335 GK000028.2:46079447-46147259 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41663 TGCCTGACGCACAGCCCAAGCCTGTATTTATGGGTGGGTTGATGAGACTTGAAGGAATGA Gene BVV0102_031030 + 0 NULL GK000029.2:45964334-45965778 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164097 TCONS_00164096 TCONS_00164098 TCONS_00164099 1 XLOC_100120 Coding TCONS_00164096 XLOC_100120 Coding Coding RPS6KB2 29:45949394-45972120 j TSS122858 7613 1 TCONS_00164096_6 1088 0.0781557861552607 27 0.666182618261826 1.77601198324136e-32 5.43352937925467e-09 3.30705756254391e-16 4.30025469837205e-09 2.02192079748673e-43 4.35881369206551e-08 1.61069260582707e-88 3.16895700382484e-35 5.80458533664033e-28 1.20536312595723e-24 1.19719152613021e-28 3.21436728569339e-117 2.2002276149337e-30 2.95893636744821e-220 2.07289264619218e-80 0.00329821114761534 0.000794913156075156 0.00025089494467519 1.21259244857886e-07 2.26932013410513e-28 1.15615045302174e-16 1.11070021890199e-06 7.16748199772345e-10 6.93142716665075e-09 2.72619955554919e-53 1.20706204542419e-07 3.05359704575097e-37 9.03908396727978e-06 3.91705531787633e-44 2.7671754698484e-06 XM_002699396.3 CARNS1 PREDICTED: Bos taurus carnosine synthase 1 (CARNS1), mRNA. 0.0 6421 100.00 0.46748982004466 NM_001166222.1 CARNS1 Homo sapiens carnosine synthase 1 (CARNS1), transcript variant 1, 0.0 3683 82.68 0.456850124786549 TCONS_00164096_6 sp|A5YM72|CRNS1_HUMAN CRNS1_HUMAN Carnosine synthase 1; 0.0 1308 88.04 0.741727941176471 2 coding 0 0 0 0 0.0101827193084549 0.941070241657008 0.0152407150083889 0.847173060407746 ATGGCAGACTCAAGGCTCACCCCCCCACATTTCGCTCCAGCCCTGGTTCTGAGTGTGGGGCAGCAGCTGGGCCCCTGGCTGCGCTACCCCTATGGCACCTGCGTGCCAACAGAGCAAGACCGCCCTGCCAGCCTGCTTGCCCCCAGCCCCGCCGAGTCCCAGGGCTGCCATAGCTTGACCCTGATTTTCCTCTCTGTGTCCACAAGGGCAGAGGGCGTCCCAGAGAACTGGGACTGCCCTCGTGGGGCCATCTTACCCAGTGATCACTACTCTGGAGGGTCCAGGAGAGGTACCCCGGCTGCTGCCCGCGCCCCGGGGAGAGCCAGGGAGGGGGCTGCGGGGCAGGGGCTGCAGGGACAGGACCTTGAGCGCCCGGACCCCCGGGGGGACCCGCGATACTACCTGCACCCCGCCACCCCGCCTTTCCCAGACACCTCTCCCATCAGTCTCAGCCTCTCCTCCTGTACGATGCTCTCCCTGGATCCGCTGGGTCCCGAGTGGGACTGCCCCCTGGGCTCCAAGGACTTGGAGGAAGAGGAGGGCCCGTGGGGCGGGGGCTCTGGCCTGCCGCCCCCGGGCTGCTTCCCTGGCTCCTGGCGCCACGACGTGGGCCTGGACTGCAAGGGCGCCTCCGAGGGGGCGGACGCCCAGGCCTGGACTGTGCACTACTACAGCCTTCTGCAGAGCTGTCTGCAGCAAGCGGGCCTCCCGGAGACCCAGGACCGCAGCCAGGCGCCCCGCACAGGCTGCCCTGGGGCGGAGGTGACCTTGTGCATTCTGGGGTCCCCCAGCACCTTTCTGTCCGTGCTGCTGGAGGCTGGGGTCCAGAGCCCGGGAAACATGCTCCTTTGCCTGTCCCCCGCTTGGCTGACAAAGGTGCCAGCCCCAGGGCAGCCGGGTGAGGCAGCCCTGCTGGTCTCCAAGGCCGTGAGCTTCCACCCAGGGGGCCTGACATTCCTGGATGACTTTGTTCCCCCTCGTCGGGCCACCTACTTCCTGGCTGGCCTGGGGCTGGGGCCTGGCTGGGGTCGAGAGGCGGCTGAGCTCGCCCGCGACCTGACCTGCCCCACCGGAGCCTCAGCCGAGCTGGCCCGGCTGCTGGAGGACCGGCTGCTGACGAGGCGGCTGCTGGCTCAGCAGGGCAACGTGGCCGTGCCAGCTACCCTGGCTTTCACCTACAAGCCACCAGCACCGCTGCGGGGAGGGGATGCCAGCCCGGGACTACGGCTGGTGGAGCTGAATGGCAAAGAGGGCCAGGAGACACTGGTGAAGGAGGAAGTGGGGGCCTTTCTGCATTCCGAGGCCCTGGGTGATGCCCTGCAGGTGGCCGTGAAGCTCAGTGGCTGGCGCTGGCGGGGGCGGCAGGCCTTGCGTCTGTATCCACGAGCTGAGCAGGGCCCAGTGGTGGACACAGTGCTGGCGTTGCTGGAGAAACTGGAAGAGGAGGAGAGTGTCTTGGTGGAGGCTGTCTGCCCACCTGCCCGGCTCCCCTTCGCAGGTGAGGGCCGCCTGGGCCAGCCCAGGGTGGTATGCAGCGTGGGCCGTGGGGACCGGCCTCTGCGACACCAGAGCTCCTTGCCCCGGACCCTGGAGGCGGCGCTGGCCCAGTGCGGCCTGGCGGAGGCCTCGCAGGTGGCAATCGTGCGGCAGCGCGTCAAGGCGGCGGCCGAGGCCGCGCTAGCCGCCGTGCTGACCCTGGAGGCCGGCCTGAGCGCTGAGCAGCGAGGCGGACGCCAGGTCCGCACTGACTTCCTCGGTGAGGTGGACTTCGCCCTGACGGTGGCCGGTCGTGCGCTGACCCCCGTGGCCCTGGAGTTGAACGGAGGCCTGTGTCTGGAAGCGTGCGGCGCGCTCGAGGGGCTGTGGGCCGCGCAGCGCCCAGGCCTGGCGGCCGAGGAGGCGGCAGCCGCGCCGCTGGTGGAGACGATGCTGCGGCGCTCGGCGCGCTGCCTCATGGAGGGAAAGCAGCTGCTGCTGCTCGGCGCCGGCGGCGTCAGCAAGAAGTTCGTGTGGGAGGCGGCGCGAGACTACGGGCTCAAGCTACACCTGGTGGAGTCAGACCCCAACCACTTTGCATCCCAGCTGGTGCAGACCTTCATCCACTTCGACGTCACAGAACACCGGCGGGATGAGGAGAACGCCCGGGTGCTGGCGGAGCTGGTGCGGGCACGCGGCCTGCAGCTCGATGGCTGCTTTTCCTACTGGGATGACTGCCTGGTGCTCACAGCCTTGCTCTGCCAGGAGTTGGGCCTGCCTTGCAACCCGCCGGCCGCCATGCGCCTGGCCAAGCAGAAGAGCCGCACCCAGCTGCACCTGTTGTGCCGCCGTGGCCCACCCTGGCCTGCGCCCTCCCTCTATGCTGTGCCCTGCTGTCCACTGGAGAGTGAGGCCGATGTGGACAGGGCTGTCTGCCAGGTGCCCCTACCAGGCGTCATGAAGCTGGAGTTCGGGGCCGGCGCGGTGGGTGTGCGGCTGGTGAAGAATGCCTCGCAGTGCCGTGAGCACTTTTCCCGGATCGCCCGAGACTTGCAGGCCGAGGCTGACCACCCGGGCATTGGGCTGGGCTGGGGCAATGCTATGCTGCTGATGGAGTTCATCGAGGGCACGGAACATGATGTGGATCTGGTGTTGTTCGGCGGGCGGCTGCTGGCTGCCTTCGTCTCTGACAATGGCCCCACGCGGCTGCCTGGCTTCACTGAGACCGCAGCCTGCATGCCCACTGGGCTGGCCCCGGAGCAGGAGGCGCAGCTGGTGCAGGCCGCCTTCCGCTGTTGCCTGGGCTGCGGGCTGCTGGATGGGGTCTTCAACGTGGAGCTCAAGCTGACCGGGGCTGGGCCGCGGCTCATTGAGATCAACCCCCGCATGGGCGGCTTCTACCTGCGAGACTGGATCCTGGAGCTTTATGGTGTGGACCTGCTGCTGGCTGCGGCTATGGTGGCCTGTGGCTTGCGACCTGCCCTGCCAGCCCACCCCCGTGCCCGGGGCCACCTGGTGGGTGTCATGTGCCTGGTGTCCCAACACCTGCAGGCACTGAGTTCCACCGCCAGCCCCGAGACCCTGCAGGCTCTTCACGACCAGGGCCTGCTGCGCCTCAATCTGCTGGAGGAGGCCCTGGTCCCTGGCGAATACGAGGAGCCCTACTGCAGTGTGGCCTGTGCTGGGTCCAGCCCAGCCGAGGCCCGTCACCGCCTGCTGGGCCTCTGCCAGGGCCTGGGCATTGACGGGCCCCACTACCCCGTTGCCTACTTCTTGTCCCACTTCAAATAGCGCTGGGGCCAGAGGGCAGGGGGAAAGTGATGGAGGGGGCGCTGTGGTACCCTCTGCTCCCTGGAGCTCTCCCTGCTTCTCTTCCCACGGCCCCGCCCCACCCTGGGCTGGTCCACTCCAAGGCCCCAGGTCTTTCCAGAGCCCAGGGCTCTTTCGACACCAAGGCCTCCTGGACTTGAGGGCAACAAAAGAAAGTACCTGGTGAGCCGCTGCAGGGCCTTCTTGCCCTCTCGAAGGCCTCCGTCCAGCCCCACAGCTGCCCAGGACTCTAGCCATGGAGAAGCAGCACCTGTACACACAGACACACACCCCCCTGCCCCCAGGTTAGTGGGAGTAGGCCCGAACCCAGCCCATCCTTCCCACCACCCCCCAGGTCTGTTTCTCTTCCTGCTGCCTATAGAAGAGAGCCTTGAACAAATCCCAAGAAAACCTGAGACTAAACCCCTCATCCTCCTACTCTCACTCCCTCATTTAACAAATTCCAGATAGTTCTAGAGCCTGCTGACAACTTTCGGCAGTGCCCCGTCTGCCTCATTTGGCCTGAGCAGTAGAAGCAGGTGGCCTGGGGTCAGCAGTAACCATCTCCCCTCCAGGCAGACACTATTGCTCCATTCACAGATAAGGAAACAGGCTCAGAGAGGAGCAGCCACTGCTTCAGTGTCTTGCCACTGTGATTGAAAGGTTGAGGACAAGATGCACATCCAGATTTCCACTTTTACTGAGCCCTACCCACCCACTCCCATGGACCCATGGACCCATGGACCAGGGAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAAGAGTCGGACAGGACTGAGCGACTTCACTTCACTTCACTTCACCCGCCCACTCAGCTTCTGGGCCCCACCCACCTCCTTACCCTCATTCACATGTGGTCCTGACACCTCCTTACCTTCATTCACATGTGGTCCTGAGACAGGTGAACACCCCTCCATGCACTCTGCACCTTATCCACCTAGCTCTGGTGCTTTGGCCTCAGGCACACTTAACTTGCATTGGCAGAGGAGACGACACTCCTGTCCTCATTCAGGGGAGGCTGCTCTAAGGACTCTTTCTCCGTGCAGCACAGGAGCTGTGGACAGCTCCACAGGCATCCCTCTCCAAATAAAGGCTTATGGACTAGTGACATGTGCAGAGTCTGGGCCAGGTTCTTGCCACTTGGACACCACTTCTCAAGCGTAGGTAGACAGGGGATGTGGGAGGGGGAAGGAGAGGTAGTTAAGGGCTACCTGTTGCATCTAAAAAGTGAAAGTGCTAGTCGCTCAGTAGCCTGCCAGGCTCCTCTGTCCATGGAATTCTCCAGGCAAGACTACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGAGGATTGAACCTGGGTCTCCTGCTTTGCAGACAGATTCTTTACTGTCTGAGCCACCAGGGAAGGATAAACTACTACACTGTCAGACCTCTGGGTTCACCATTGGCAAGGGGCGTGCCAAGGGCACCCACACCAGGACCCAAACCTGAGGGTTTCCTGAAGATGGAATTACAGCAAGGGCCAACCCCAACCAGATAACCCTTCTCCAGGCTGGAGACTCTGAATTCTGTCCATTTGAGTTCATATATAGCCCCCACGGTCCAACTGGAATGCACATCCAGACAGCTTCCAAACTGTTGGAAATCATCCAAGGTCTGGTCTGGCCCAACTCACACCCCCAAAGCCCCATCCAGCATCTGTGCCCACTTCTAAACTGACAGGCCGGGTTTGGCATGTTCGTTATTGTAGTGTTGCCAAATACAAGTTCTTGTGCCTGACGCACAGCCCAAGCCTGTATTTATGGGTGGGTTGATGAGACTTGAAGGAATGAATCCTTTTGGGGAGGAACCTGTGGTTCAGAGAGTAAAGAATCTGCCTGCAGTGTGGGAGACTCAGGTTCAATCCCTGGATCGGGAAGATCACCTGGAGGAGGGCATGCAACCCACTTCAGTATCCTTGCCTGGAGAATTCCATGCACAGAGGGACCTGGTGGGCTACAGTCCCGTTGGCTTGCAAAGAGCTGGACAGAACTGAGCGACTAACACTTTCACTGGCAACAAAACCCAGCAGTGAGTTGAATACGGAGCAGTAAATGCTCTGACTTTCAAGTCTTCCAGCTGAGAGGCACATTAGGGAAGCCGTGTTGCAGCCGCCGGCTCCCTTTCAGCGTCGAACAGAGATACTGTACCTGCCTCTCGCCGCCACCCAGACAACCCGGCAGCGCAGGGCTCCAACGGGGCTGGGAATTGTGTTTACTCTCAAACCTGCATTCACTTTCGACTATGTCCCATCCATGCTCAAACTCGCCCCAGAACCAAAACAGTCGCCTTCCAGGAGGCTCTTGTCCGGTGCCGCCCCCGGGGAGCTGCGTTGGGAAGACTGAGCGGCCGGCCGAAGCCTGGGTCCGGCTGGATTCGGCACCTAAGCACTCTGGAACTACCATTCCCAAGATGCCTTACTCCCGCCGCCGACTCGAGGGCGGGGGAATCTCTTGTGTCATAGGTGCGCGAGGCTGTCGCGGAGTGATGACGTAAGGCCCCGGGCTCCCGGCCTGTCAGTCAGAGCGCAGCTGGGTACTCGCCGGTGGGCCCGCTGGGCCGGCGTAGCCATGGCGGCGGTGTTTGACCTGGACCTGGAGACAGAGGAAGGCAGCGAAGGCGAGGGCGAGCCAGAGCTCAGCCCCGCGGACGCGTGTCCCCTCGCGGAGTTGAGGGCGGCTGGCCTGGAGCCTGTGGGACACTATGAGGAGGTGGAGCTGACTGAGAGCAGTGTGAACCCGGGCCCCGAGCGCATCGGTCCCCACTGCTTTGAGCTGCTGCGTGTGCTGGGCAAGGGGAACTATGGCAAGGTGTTCCAGGTGCGAAAGGTACAGGGCAGCAATCTGGGCAAAATATATGCCATGAAAGTCCTGAGGAAGGCCAAAATTGTGCGCAACGCCAAGGACACGGCACACACGCGGGCCGAGCGGAACATTCTGGAGTCGGTGAAGCACCCCTTCATTGTGGAACTGGCCTATGCCTTCCAGACTGGCGGCAAACTGTACCTCATCCTCGAGTGCCTCAGCGGTGGTGAGCTTTTCACGCACCTGGAGCGAGAAGGCATCTTCCTAGAAGACACGGCCTGTTTCTACCTGTCGGAGATCACACTGGCCCTGGGCCATCTCCACTCCCAAGGCATCATCTACCGGGACCTCAAACCTGAAAACATCATGCTCAGCAGCCAGGGAGTCGATCCACGAGGGCGCCGTGACCCACACCTTCTGCGGCACCATCGAGTACATCCGCCCTTCACTGCAGAGAACCGGAAGAAAACCATGGACAAGATCATCAGAGGGAAGCTGGAACTGCCCCCCTACCTCACCCCGGATGCCCGGGATCTTGTCAAAAAGTTCCTGAAGCGGAATCCTAACCAGCGGATTGGAGGGGGCCCCGGGGATGCTGCTGACGTGCAGAGGCACCCCTTCTTCCGGCACGTTAATTGGGATGACCTCCTGGCCCGCCGTGTGGACCCCCCTTTCCGGCCTTCCCTGCAGTCGGAGGAGGACGTGAGCCAGTTTGACTCCCACTTCACGAAGCAGACGCCGGTGGACAGTCCAGACGACACGACGCTCAGTGAGAGTGCCAACCAGGCCTTCCTGGGCTTCACGTACGTGGCGCCCTCCGTCCTGGATAGCATCAAGGAGGCCTTCTCCTTCCAGCCCAAGCTGCGCTCGCCCAGGCGCCTCAACAGCAGCCCCCGGACCCCTGTCAGCCCCCTGAAGTTCTCGCCCTTCGAGGGGTTCCGGCCCAGCCCTGGCCCACAGGAGCTCGTGGAGCCCCCACTACCTCCTCTGCTGCCACCGCCGCCACCACCACCGCCCTCGAGCACTGCCCCTCTCCCCATCCGACCCCCCTCGGGGACCAAGAAGTCCAAGAGGGGCCGCGGGCGCCCTGGGCGCTAAGAGTATGGGTGGGGATACGGGCGGCAGGACCCTAGGCCAGTTCCAGAGACCTGGAGCCGTGCCTAGGGGTGCAGGAGTGACTGGTGTGAGTCAGTCTCTATTGGGGTGGCCATACCCCGGAATCATGACCACCAAGGGCTGTAGGCTATGGCTGCCAGTTGAGGGGGCACCCACCTGGCCTCCTGCAGTTGAGCCATGCCCTTGGAGAATTAAAAGGATCGAATCATGGCACTGACCTGGCTCTTCCTTGGCTTCCAGGGCAGAGGTGGTGCCCGGACGAATCCCAGCTCAGGGATGGGAAGGGTCATGACAGGACCACAAATCCACGGAGCTGGACGGATTTTATTTCCGTTGACTGCTCAGAGCAC EMBV3_22192 CCCGCCGCGGGCCACCAACCGTGGTTACAGGGGAGCTCTTTGCTCAGGCCCCAGTGGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43127 ATCCAAGGGCGAGCTTCCCACTCCAGCCCCAAGCTAGAGACACTGTAAGGCCAAACACAT Gene BVV0102_173576 + 0 NULL GK000016.2:24887154-24908217 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066851 1 XLOC_041300 Coding TCONS_00066851 XLOC_041300 Coding Coding C16H1orf115 16:24876775-24889309 = TSS50415 2797 2 TCONS_00066851_11 150 2 0.77698874970079 0.0002170732771493 3.61652290906819e-05 1.83624149700593e-05 8.01616062304614e-06 5.61072490546037e-07 4.45479907857495e-06 6.4576676702569e-05 2.3190821793502e-05 4.38811335427251e-07 7.42874539792752e-06 7.77520234732351e-06 1.83414972882504e-05 0 7.45946629834816e-07 2.56880780007178e-05 0.0100023441416883 0.0082031077549169 0.00960709311778026 2.56380243139074e-05 0.000154395958766166 4.56390609417628e-05 0.00753516974516383 0.00154701223799762 0.00651715376916537 2.98490904672482e-05 3.53910211906322e-05 4.58411874024437e-05 0.000206046120595909 0.000388338525213271 0.000561408327335646 NM_001205383.2 C16H1orf115 Bos taurus chromosome 16 open reading frame, human C1orf115 (C16H1orf115), mRNA. 0.0 5045 100.00 0.999642474079371 NM_024709.4 C1orf115 Homo sapiens chromosome 1 open reading frame 115 (C1orf115), mRNA. 0.0 838 76.14 0.4168752234537 TCONS_00066851_1 sp|Q9H7X2|CA115_HUMAN CA115_HUMAN Uncharacterized protein C1orf115; 2e-51 164 75.00 0.992753623188406 0 coding 0 0 0 0 -0.074389785082179 0.613049247784092 0.0265063174204317 0.633494630589859 GTCCCCGACCTCAGCCGGAGGGCCCGCGGCATCATGACGGTGGGAGCCAGGCTCCGAAGCAAGGCGGCGAGCAGCCTCCCGCGTTGTGGGCCCCTGACCCGGGGGCGAGGGCGGACGGAGGGGGACGAGGAGGCAGCCGCTATCCTGGAGCATCTGGAGAACGGGGCGGAGGCGGCGGAGAGCGAGGCGAGCGCCCGGCGCCCGGGGTCCCGGGGCGCACGGAGGGTGCACCTCGCCGTCCTCCCAGAGCGCTACGAGCCGCTGGAGGAGCAGGTGCCAAGCGAGAAGCCCAAGAAGAGGTACCGGAAGAAGCTGAAGAAGTATGGCAAGAATGTTGGGAAGGTTATCACCAAAGGATGCCGCTACATCGTGGTCGGCCTGCAGGGATTTGCCGCCGCCTACTCTGCCCCATTTGGCGTGGCCACCAGCGTGGTGTCGTTCGTCCGCTAGTGGGAGCTGCCTGGGTGGACCCTGCAAAAATAATCGGAAGCCTCTGTTCTGGGAACAGTCCAAACCCAGGAGCATTTCAGACTTGAACCCACAGAATACTCGGAAGAGAAAAAACTGTCTTGGTTGAACTGGATGAATGTCATGGATGAGTCATCCCCATCCATCTGCTGAGCTTCCACATCTCTTGGACACAGGTGGCCCTACTGGACAATCCTGCAGAGAATTAGGCTGAGGTCGGGTTTGGGATTAGCAAGAGTTTGCTAAAACCGGAGCTCCCCATGAAAGATGGCAGGGGGTGGCTGAGAGGCAAACACTTGGCCGGAGCCAGTGCTCTGGGTGGGCAGCAGAGTGGTGAATAGGGATGGGGTGGGAGGTGGGGGATTTTGATTTGGAGTGAGCCAATTTGCTCGATTCTGAAAGTTCTCAGGCTGACAGAGCTCCCAGGCCGTGCCTGCCTCGGTTCTGAGAGTACCCAAGGAACTGTTTGTTCCTAAAGTCATCCCCCCATCTCCTTTCTGCACTCCTTTGCCACCAGAAGTTTAATTACAGGCTTGAGAAGGAGGAAAGAAAAATCTCTTTGAAGGCGCCGATGCTTTGAAAACCATGCTGACACTGTGTCATGACTGTTTCAAGTAGATGAAAGCTTGTCACTTTCACCTTCTCTGACATGAGTGTGCAGGTGGTGATGGGGGAAGGAGGATCAGCAAGTTCAAGTGCAGGTTGTTTGAGGGAGGGAGGGCTCCTAAGGGCGGCCAGGCCCAGTCCAGACCATTCCAGCCTGGCCGCGTGTGGGGCTGGCCAGACCCGCCTGCAGGCAGATAGCCAGCTGAGGTCATGGGCTTCCTGACCCAGCTGCCAGGTACCATTAGCCCCGTCATCCTTGGCATCAAACCGACAGCGGGTGCTCTGTCTTGAGAGAAAAACACCTAGAAAGGAAGTGTATGATTTAGAAAAGGAACCAGAAAGTAGGAGAAGGTATGAAGGAAGCAGAAGGAGGATGCTGGATGAGAGAAGTGGAAGCACAGGGACCAGCTCTGGGTTATCAGTGTTGAAAAGTCTTAGGCTCTGGATGTGGGCGAGGGGAGGCTACGTGGTCAGTGGTGCCACGCTGATGCTTCCAGACCCTCTGAGGCCCGTGAGCTCACATTGGCTGCCCTTGCAGTAGACTTTCCTCTCCTGTGCTGCCCAATTTGACATCATCTCAGCTGGATTCAAAAAGTTGGGGTGGGTGAGAGTCCTGACCTGGAGGATGATCTGTGGACTGCCACTGAGTCATTGGATAGGGAGGTGCCCACTGCCAACCCCCATAACACGCCCCTGTTCTGACCTGGTTTCCAGAATAATAATTTCCAGTTCGAAATAGTTATTATGAACCAGTCTGCAGGTTCGGTGATGACACCTACTTGTTGCCCTGTGAAGTTTTCCTGGGGAATGAAGGCTCAGTTGCTCACGCTTCACCCATCAAACCTAGCCAGGAAGTGGAGAAAGTTGGAAGACAGACAGACAGATGGATAGAAAGAGGAATGAGTGGAGGGGAGAGTGTTGTAGCTGTGAAGCTAGATTCTGCTTCACGTCCTGGAGGCTCATCATTGAAGGTGAGCTGGGACCTAATTCCTGCATCATTCATATTTGTGAGGAAAAGAGAATAGAAATGGCCCTGTGTTAGCACCAATGGCACATTTTCACACATGTAAGATAATTATAGCATGCCCGGCCACACTGGGAGTCAGGGAAAAGGAGACATCAGGGGAAAGAAAAGCAGAGCTTCGTTTAGTGGGGAAGAGAGTCAGGACTGCTGATCACAGGAAAGGCAGATGGGGGAAGGAGCCTGCGTGGGTTGGGAGCACACCTTCCTGGTGGCCCAGCGCTGCAGACTTGACCCAGAGAACCCTGTTGAGTTTCTCGGGGGACCTCAAGTGTGGCCTGGGAGGGACAAGAGCGGCCAAGGCCCATCCAAGGGCGAGCTTCCCACTCCAGCCCCAAGTTAGAGACACTGTAAGGCCAAACACATTTGGCCCCTACGTTTTGGAATTCTGGTTAAGAATTAACCCAGAAATTGCAAAAGTCGAAACTTTCCAGGACTATCCCTGTGAAGGTCTGTGCACAGAAAATGAACCGTTCTAAGCACTCAGCTGAGTTGTCATTTCCTCCAAGACAGGGTACCCATGCTGCAGCTTACTTTTCTGCCTTTTCTTTCTCTTCAGTTTTTTTTTTTTTTTTTAATATCAGCATCCACACTCTACTAAAAATTGAATTTTAGAGCTTTCCCTTTACATGATTGACCAAGAGGCTTCTTTTGTATGTTTTCTTCATCATAGTCTGTAAATAAAAGACCTGATTTGTCTAA EMBV3_16291 AATCCCGGGTGGAGCCCACACAATCACACAGACCACCATCTGAGCCTATCTCATTTGTCT Gene GeneID:536930|LOC536930:NM_001101168:127_cdna Constitutive 0 NULL GeneID:536930 21 GENE LOC536930 NULL hypothetical LOC536930 EMBV3_24324 ATTAAGACTCTGTGCTTCCACTGCAAGGGGCGTGGGTTCAGTGCCTGGTCGGGGAACTAA Gene GeneID:514104|WDR81:NM_001105366:112_cdna Constitutive 2 NULL GeneID:514104 19 GENE WDR81 MGC166345 WD repeat domain 81 EMBV3_09810 AAGCTTTCTCCCCAGAACACATCCTTGCATGATGGTACCCGCCGATCACTAGACTGTCAC Gene BVV0102_154825 + 0 NULL GK000016.2:2121275-2184533 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06070 AGGAACTAAGCCTCCAGGTCTTGGACTTACAGAGTGTCAAGAATGGCACGCCAGCAGGGG Gene GeneID:506628|CBX2:XM_002696153:84_cdna Constitutive 0 NULL GeneID:506628 19 GENE CBX2 NULL chromobox homolog 2 (Pc class homolog, Drosophila) EMBV3_41994 GATGTCTTTGCTCAGATGAAGACCCAGGTGAAGGAAGGGATACTAAGGTGAAGGGAGGGA Gene BVT0102_394311 - 1 EMBV3_18585 GK000014.2:83783775-83892852 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054085 1 XLOC_031898 NonCoding TCONS_00054085 XLOC_031898 NonCoding NonCoding - 14:83819359-83825488 - TSS39765 5600 2 TCONS_00054085_5 100 0.146607142857143 2 0.0864882506527415 0.000119049765077366 7.00910482907731e-05 0.000183021259527415 6.9695459033372e-05 0.000118139700160252 7.65543038770024e-05 0.000168702541946956 0.000115261458665812 0.000100035721689591 3.71039203273926e-05 0 1.27703065319473e-06 2.56185897810205e-06 1.00800192197584e-05 1.2265517590207e-05 0 0 0 0.000443061055611707 0.00102349823390277 1.084186142054e-05 0 0 7.48422266765009e-06 0.000442926559629263 0.000196446333973611 9.64069037503359e-05 0 1.73378981909294e-06 5.36808056913652e-06 NM_001098464.1 C16H1orf116 Bos taurus chromosome 16 open reading frame, human C1orf116 (C16H1orf116), mRNA. 3e-41 176 79.50 0.0348214285714286 NM_022783.3 DEPTOR Homo sapiens DEP domain containing MTOR-interacting protein (DEPTOR), transcript variant 1, mRNA. 1e-161 576 73.26 0.177142857142857 0 noncoding 0 0 0 0 0.0264274356248042 0.896814961901195 0.0291312688332423 0.681824011230892 GAAAAAACCTTTTTAATGCACTTTTTTTTCCAGGCAAAAGAGCTTCAGAAAACATCCGTCACTAAGCAGTTTTACAAATGGCACTTTTGGTTACATTAGATAATTGGATACCAGCCCCACGTGTCCTCTCTGACAGACTAGTTGTAGATCAGCTTTACAATGCAACTCTTTCTTAGGATAAAAAATGGTTAATTTTTTCTAAAGAAAGGAAAAGCTGAAACCCTAAAGGCATTGTTTTAAAAATGTAACATTTATTTCATGCTATACTGTCTATTGTTATATTATAATTTTAATTATTTTGCTATAACTTTTAAGAAACAGAGAAAATAAATTTCAACCTAATTTAAAAATAAACATATATATTAAGTACATATATTAATGCATTTTACAATACCATATAGTGACTTTGATTATAAACTTCCTTTTGGTGCACGGTAGATTTGTCCTCTTGGTATTGAACTGAGGAAAAACATATTATACCTGAAATTCTTCTTTGCATGAGTAAAACCATGGTCATGACACCAACAGACTCCAACCAATTTGCAAAACTGAAATCTTGGGTTATTCTGATCACGGATAATCAAAGTGAAACACGATTAGTATTCACCAGGAGAGAATACTTAACACTTTTCAAACAGATCTTGAAAGCAGAGTATTTTCATGACATATTTGAAAGGAATGAGTACTTGGGAGAGTGAGACTCTGTTTTGGATTGAAAGCAGTGGTTTTTAACTATCAATTATTGCCGCCCCGATGCATTCACCCTTCTTAGGGTAGTGTGAATTTGGTCGTGTCTAATCTACTCAAACATGGGTCTCTTCATGTTACCCACCATTTCTCAACCAGAAATTTATCAGTTTATATAATTATCTGACAGAGATTAATAAGAGAACATCAGATAGCAGAACCAACCCAAAGGGCGGCTGCATTTTCTCTCCAGAGCAGAATCATTCAACATGGCTTTCACACCAGTGCTGACAGCACATTCTGTGCGAATGGCTGGGCGTAACGTGGTCTCTGTCTCCATCACACACAGAGACACCCGGAAAGCCAGACGCGTCTTCTCTGGGAGCAAACCACATCATTTCAGAGACTCCACGAGTGACCTCAACTCTCACACGCAGTTCCCCAAAACGCAGACACACACATACGTAGGAAATGAAAGTTCTTCAAAATACTGCTTCCTCCTAATTCAGGGTAATTCTTGGTGTTCCGTTTAGGAATGGAGTTTCTAAATTTTAAAGCAGTTCAACTGTCAAAATGCCATACAAAATATTTACTTTTTAATATGCTACGATTTAACAACTCAAGACCTAAGTACGTATCCTTCACTTTCACGGGTACACGGCCCAACCGCGTGTCACGAACAAGCCAAAGCCAAACGCCCGTCGTCCCCGCCCCGCCCTGTGCCGCAGGGCCACACTGAGGATTCGGGCCGGCAGGGAGGGAGGCGCTGGGCCCAGGCCGGCCCAACAAGACCGCTCCACGCCTCAGCGAAAGGCAAAGGGCAAGACGCGCGCTCCCGCGGCTCCACGCAGCACTGTGGTTTTGGGATTTCCTGACTCGTTTTCACTGGGCGTGGGGCTCTGTTCACAACTGTTGCACTTCTACCCGGCGGGTGGTCAGTGATTGACATCTGGATTGCTGAAGTCTTGCAACAGCTAGGTAACTCCTTAGGCCTCCACTCAAAAAGTAGTATCTACTCTGGGTGGATTAAAACCAGCCAGGCTCTTGGCAGCTCCTCCATCACAAGGGGCAGCCTGCTTGCAGACCTCTTGGCTCTGGGCTAGCTTTGTGACTTGCACTGGCCAAGAAAAGGCTACGAAGGTGACCTTTTGCGACTTTGAGCAGGTCCACAGAAGGGCTTGCAGTCTCTCTTCTTCCTCTCTTTGATCTCATGAGACCTAACGAGGAAGCCTGGGTCAGCTATGGGGAGAGACCCCGTGAGTCCACTGGAGGAGTCTCAGCCATAGCCCCAGGCCACAGCCAGACGGAGTCACAGAGCCAGCCCCCATCAGCCAGTCCCGAGCATCAGCCTCTCTGAGCTCAGGTGCGCGTGTGAACTCAGCCAGAATATCAGGCTGTGCTCGTTCACCTTAGCACAGCTCTGCTCAAAGGCCAACCACAGGCTCCCTAGAGAATCAGTAGTGTCAGAAGCTATGCTCCAGGTTGATTGCTCGGACAGCAGTGGAGAGCGGACAGCCTGCTCTGTGTCAGGAAACGTGCTAGGCGAGGGCAGCGCCGGGGAGCAGGACACAGCCCCGTCCTGCAGACACTTAGAACTCCGGGAGACAGACAGGGGTGGGAGCATTTCTGAGGAGACGTCAGCAGTGCTGGGATCACACAGGCTGGTGTATAGGGGTCCCTGGGAATTCAGAGAAGGGCATCCATCCCAGAACCAGGCTGCTGGCAAAGATTTCTCAGAGGGAATATCTAAGACAATGCCTAAGGGGAGTTCATAAGACAGACTGTTCCAGGCAGAGACGGAGAAAGAATAATATTCCAGGGAGGAAAAACTGCATGTGCAAAAGCTGGAGAGAGCTCAACCTGGCCGTCTGGGTGAGGAGCATTCACAGGGTGAGGATGCAGCCTGGGCTGGGACCACAGTTCAGAGGACGCTCTCCTGAAGCAGAACTCTCTGCTTTTGGGCTTTAAGCCAGGGTGGTGGGAGCCAAAAGCTTCCCTCCCTTCACCTTAGTATCCCTTCCTTCACCTGGGTCTTCATCTGAGCAAAGACATCAACGCCACCCTCTGAATCAAGGAAAACCCTTCTTTGCTACTTAGACTGGCTGAAGGGACGCGGAGTTGTGCCAACCCCCGAATAGTCATCAGGTCGGGAGCGAAGGAGCAGCAGCCGGCGAGAGGATGCCGTTCCCGGAGGCCCGCCTCCTCCTGTGTCAGACGCGAACACCCAGGCCCAGAGGGCTTTTAGGAGACCTTTAAAGGGAGCCTGATGGGTAACACCTCCTACATACTGTTAACAGCCTCGGGCCTTGATGAGCCGGTTTCCTCTGCTGTAACATGGAGATGAGGCCGCCGCTGACCGCCCAGATCAGCAGGAGAGACTGAGCGCAGCACGGGGGCAGAAGAAGGCGCCACAGACAGTCTCCAGCTGGGGAAGGGCTGTGGGTGGGGGACAGGGCGTCCGCACTAGACGGGCCGTGTCTGAATCCAGGCTCTGTCACCCAGGAGTTCCCGCCACTGTGGGGACTTAGAGACCACTTCTAAACGTGCTCAGATTGAGCTTCCAAGTCCGAAACACGAGGGCGATGCTAACTGCCTCTCAGGTCGTGATGAGGATGAAGAGCGACCACAGCGCCTGGCACGTGGTGTAAACGCAGGGCACACAGAGACACCAGGACTTCCCAAGGCAGGCTGACAGGACTCAAGTTAGCATCCTGCATTATTTCAAAACCCTGCTCTCGGCCTAAGGCTACAGACGAGAAAAGCCGGGATACCAGAAACACAGACGTCTGACGTCTTCAGCATGGCGTGTCCACCCCACCCGTACCACCATATTATAACCCATCACTAAAAAAAGGCCGAGGCACAACATTCATATTTTGTTACTACATGGTAAGAAAGTAGCCTTGTCATTCAGAACGCGTTATATGAAAATAAAAGCAATTGAGCATTCCCTGACTCCCTAATTTGGCACTCTGAGAAACTTCCTCTACACACCAAGCTCCAAAATGCATTCTCTTTGAGACAAAAAAAAAAAAAAAAGACACATGCATATATGTACAAGTGGGCTCAAAAGTTACAACACAAGAAGCTGCTTTTGGTGAAAAATAATCCCACCAAATAAGCAGCATGTCATGTTCTTAGAATGTGTCCCTAGAAAGCTAGTGAAAATTCAGGCCACTAAGGCAATTTAGTTTCAAGTTTTATCACATAAGGGCCAAGTTCTAGAATACTTCACAAGGGACAGCTTCAGAGTGAAATCTTGACAGAGGCATGATTTTGAATTGTATATGTACATACTAACTTGTCTGTTTTGACATTCAACATATTCAGAATTATTTCTAGAAAGCTGCTGTTGCTGATTGACAGAATGATCCAGGCTCAGAAAGAGAAAACAGAGCCCACATAGTTTAAGTAATTCTCTCTCTCTCTGCCCCACCCACGTCATCACAAAGTGTTTGCTTTTGACCACTGCCGTAATTGAAAACACACATTAAGTTAGAAGTTGATACTAAAGGCAGGAATTAAGAAAAAGTCAAAAAACGCCTTAGAACCTTCAAAACGCCCGTTAACAAGCACTATTCCTTTGGATGTTGCTTCAGTTTGAAATTCAGTGAACTCGAGATCCTCTGATAAACAGATCCATGCTCGTTTTGGTGAGAGTACAACTGTAAAGTCTAGAAAAACTACTGTATTGATTCCCACGAAGGCAAATTTAGCACGGTGCTGTTTCGGCGAGAGAAGCATCTCAACTTATTGTGAAGCAAGACCAAAAACAATGGACGAGAACCACAAACGGAAGTTGAGTAAGGCAACGCAACTACGTAGGGGAAAAAATTCTGTGTCCCAAACTTTTTCTGCACCGACAGACGTTGTCTTTTTCACTTTTTTCTTTTTTAAAGACACACTCCCTGGTTCTCCCACATTCAACAGGGAAGCAGTGCAGGAAACTCGGATGAGACGCGTACGTGCGCAGTGAAGGCCCGCGGGCCCGCCGCGCGCAGTGAAGGCCCGCGGGTCCGCCGTGCGCAGTGAAGGCCCGCGGGCCCGACGCCGCCGCCGCCCCGCTCAGCACTCCAGCTCCTCCATGACCTCCATCACGATGGTCCGCGGCCCGGTCAGAATCAGGTTGCTCACCGTCCGGTAGTCGACGTGCAGCACGTTAAGCCCGTTCACAGAGACGACGAGCTGACAGACCTGGAGGGCAGAGAGAAAGCACCTCTTGAATCCCGCGGCGGCCCAGGCGAGGGCGCGGCGCTTCCGTTACCGCGACGCGGACGGACCGGAGACTGTCACACGGGGCCAAGCAAGTCAGATGGGAGAGGCAAACGGATGCGGTGTCGCCCACGTGCGGGGCCTAAAAAAGGCGCACAAGAGCTTACCTCCAAAGCAGCAGCGGGGTCACAGCACATGGGATCTTAGCTCCCCAACCAGGGATCGAAACCAGAGCCCTTTGCGTGAGAACACGGAGTCTTAACCACCGGACCGTCAGGGACACCTGAGATTGAGGAATAAAAGAATTTGTTACCGTGGGTGTTAACCTCAGGCTCGAACCCCCCCTTCCTGAGGGAATACAAGCTGCAGCTGCTGAGAGGCGTTATCCTGTCTAATGCAAAAGTCTAATCATGTCTAACTTTCACCAGAACTTGTTAAGCTGAAGCTGAAAGTCGCTCAGTCATTTCCAACTCTTCTCGACCCCGTGGACTGCAGCCCGCCAGGCTCCTCTGCCCATGGGAGTCTCCAGGCAAGAACACTGGAGTGGGCTGCCGTGCCCTCCTCCAGGGGGTCTTCCTGACCTGGGGACTGAACTCGTACCTCCTGCAGGTGGGCGCTTTACCACTAGGGCCACCTGGGAAGCCCATGAAGGTGCACACCTGCTCTCAATTACCATTATGCGTGTTGATGCCACAAAGAAC TCONS_00052433 TCONS_00052437 r 5' 9855 TCONS_00052433 TCONS_00052437 r 5' 4235 EMBV3_23699 CCTCAAAGCCAGATGAAAAAGCTAATGACAACAAAAGGTCAGACAGTGAGTGTTTTGGGG Gene BVT0102_348611 - 0 NULL GK000006.2:80162862-80888908 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42967 AGCCGAGAAACTCGACATCATCCGTCAGAAGGCTTCACCCCCATGACGGTGCCAGACCTT Variant GeneID:282060|SARS2:NM_174457:508_cdna 662^767 1 EMBV3_07243 GeneID:282060 18 GENE SARS2 NULL seryl-tRNA synthetase 2, mitochondrial EMBV3_07977 GAGGGCGCAAAAGAGTTTGGTCAGAAACTACAAGACTTAGCAGAGCATAGTGATCCTGAG Gene GeneID:783344|LOC783344:XR_084131:4_cdna Constitutive 0 NULL GeneID:783344 X PSEUDO LOC783344 NULL similar to armadillo repeat containing, X-linked 5 EMBV3_02095 TGCCTGCTGGGTCACTGGCATTCCGATTGAGATAGGGCAGACAAGCCAGATTTTCTCTCT Gene GeneID:618326|LOC618326:XM_002693624:159_cdna Constitutive 0 NULL GeneID:618326 15 GENE LOC618326 NULL similar to olfactory receptor Olr555 EMBV3_35944 CAGCTAACCTGGAAGAAGCTCACCGCTGGTTTAAGTGCAGATTTGACGGTCTACAACTCG Gene GeneID:509158|LOC509158:XM_002685477:182_cdna Constitutive 0 NULL GeneID:509158 2 GENE LOC509158 NULL hypothetical LOC509158 EMBV3_31005 CTCCTGCTCATGCTTCCTCAGAACCCTCAGGGAAAGTCTCTTTTTACAGAGAACGCCCTT Gene GeneID:783335|IL17RE:XM_002696936:496_cdna Constitutive 0 NULL GeneID:783335 22 GENE IL17RE NULL interleukin 17 receptor E EMBV3_03053 AAATGTTGCCATCTATTCTGCCTGCATTGCTGTGACCTGGGGTCCTTGCGACCTTCAGCA Gene GeneID:100296832|LOC100296832:XM_002700180:5_cdna Constitutive 0 NULL GeneID:100296832 X GENE LOC100296832 NULL similar to short coiled-coil protein EMBV3_03794 TGGGCTCCCATTCACTTCCTACAGGTCCTTCCTCAGGACATCTGCATGTCTAGTCACTTC Gene GeneID:524306|FAM120B:NM_001102507:11_cdna UTR3_Alt 2 NULL GeneID:524306 9 GENE FAM120B CCPG MGC143258 family with sequence similarity 120B EMBV3_09857 AAGTATCATAAACAGTAGCTGTGAGTGCGTGCTGAGTCGCCTGTTGTTACTGACTCTGCG Gene BVV0102_082954 + 0 NULL GK000019.2:21799578-21851878 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31950 TTTTCTCACACCTCGTGACTTCCCAAATCCATTAACAGATCAGACAGCCTCTGGGCTCCG Gene GeneID:528926|LY9:NM_001075918:299_cdna Constitutive 0 NULL GeneID:528926 3 GENE LY9 MGC139478 lymphocyte antigen 9 EMBV3_23271 TAAGCGCAAGCGGTTTAGTCGCTGAGATGTATCTGACTCTTGCGACCCCGTGGACTATAG Gene BVT0102_207912 + 1 EMBV3_25334 GK000008.2:107174443-107410242 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29639 CAATACCCTCCCTGGCGAGGGGTCCTAGGCCCAAACGGCTGTTGGATGAGTTGCAGCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43512 CTGTGTCAACATCCCCATGATGCGCCAGCAAGAGCTGCAGCCATAGGCATCACTCAAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23010 GCTGGGAGAAGCGTATGAGCCGCAGCTCAGGCTACATCCAGAAGATTAAGTCTGGAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03524 GGAGGTTGCCGGTGAGGCTTAAAGCGGGCCCCTCTGGTGACTGTCCTCGCCGTGCCTTCC Gene BVT0102_185138 + 0 NULL GK000002.2:68167785-69013141 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00109864 1 XLOC_065768 NonCoding TCONS_00109864 XLOC_065768 NonCoding NonCoding - 2:68464586-68464973 - TSS81485 387 0.868217054263566 1 0 0 0 0 0 0 0 0 0 0 5.31588524467084e-05 7.88692994227381e-06 0 0 0 0 0.000204741304973556 0.000128699791788864 9.72516794989369e-05 0 0 0 0.00069349019655357 0.00020149711970246 0.000187717745989612 1.79030305490579e-05 0 0 2.48196002598054e-05 0.000150530396503727 0.000186425812727649 XM_005196391.1 LOC101910009 PREDICTED: Bos taurus collagen alpha-1(I) chain-like (LOC101910009), mRNA. 7e-74 280 90.05 0.534883720930233 NR_046235.1 RNA45S5 Homo sapiens RNA, 45S pre-ribosomal 5 (RNA45S5), ribosomal RNA. 4e-13 78.8 71.43 0.475452196382429 0 noncoding ACCCCCGCCCTGTGGGCTCCGTGCCACGTGTCAGGTGTTCTCCTCCTGGGGTCGTTGGCTGCTCTCACCTGAGGCGAGGTGGGGGGGCCAGGGGAGGTTGCCGGTGAGGCTTAAAGCGGGCCCCTCTTGTGACTGTCCTCACCGTGCCTTCCCCTGTGCTCCATCTTGGCTCAACTGATCGATCGATGTGGTGTGGTCGTGCTCTCCTGGACCGAGCCTAAGTCGTGCCAGACGAGGGACCGGCGGTCCCCGTGAACGTGTCTGCTCTTCTCGGTCTGTCCACGGGGCCCCTCGCCTGTCTTTCCCCCTGCCCGTCGGGGATGGTGAGGAAGGCAGGGGTTGGGTGCGGCCTCTGGCCCTGACCTTCGGTCTCCTGTCCCCTGCTTC TCONS_00102598 TCONS_00102600 TCONS_00102601 . 3' 353298 TCONS_00102598 TCONS_00102600 TCONS_00102601 . 3' 353684 EMBV3_28347 GGGTACTCGTACTATTGAGAACCGTCTTTTCCTTGAAGAAAGCACTTCGACCTGAATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42241 CGCTGTCTTTCTGGAGCAGACTCTCTCCAGACCGTGTTCCTGGGCTTGAATCGCTCAGAC Variant GeneID:525059|GSS:NM_001015630:1153_cdna 358^433 2 EMBV3_25320 GeneID:525059 13 GENE GSS MGC134298 PRNP glutathione synthetase EMBV3_01687 TCCCAGAACAGGCGCTTCCATCATATTCAGCTGCACCCTTATGCCTAGAATAGGACCTGG Gene BVT0102_355969 - 1 EMBV3_42946 GK000018.2:55063462-55071167 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39398 CCCCGGAGACATTCCTGAGAAGGGTCACAGAATCCCAGCCACCCAGGGACCAGGACTCTG Variant GeneID:515848|ACBD4:NM_001046214:251_cdna 614^700 2 EMBV3_37579 GeneID:515848 19 GENE ACBD4 MGC137561 acyl-Coenzyme A binding domain containing 4 EMBV3_05538 TTAGAAAAGCATAAAGCTGATGTTGTCAAGATGTTCAGTGGTTATGGAATCAAGATGCTT Variant GeneID:525169|WDR11:NM_001101122:20_cdna 232^385 1 EMBV3_19517 GeneID:525169 26 GENE WDR11 BRWD2 PHIP WD repeat domain 11 EMBV3_39107 GCTCGCTCCGGAACTTGTGATCTCCAACGACCAAATTCTGCCTTGGCCAAGGCAGCGGTA Variant GeneID:538690|ID3:NM_001014950:239_cdna 386^724 4 EMBV3_34390 GeneID:538690 2 GENE ID3 NULL inhibitor of DNA binding 3, dominant negative helix-loop-helix protein EMBV3_36556 CTCGAGCCCATCTGCCCTCCGGGCCGACTTCCCAGGCTCTGACTTAAACAAAGACGAATT Gene GeneID:510136|ZNF295:NM_001083659:12_cdna UTR3_Alt 2 NULL GeneID:510136 1 GENE ZNF295 NULL zinc finger protein 295 EMBV3_02796 TCGCTACAGTCGAGCGGTGGTGGACTACGACATCAGCATAGTGGAGCTAAGCCAAGATAT Gene GeneID:527107|CORIN:XM_002688245:67_cdna Constitutive 0 NULL GeneID:527107 6 GENE CORIN NULL corin, serine peptidase EMBV3_20621 ATCCTCAAAGCTACTGAAGTGCAGTTCCCGCCAAAGCCAGTAGTAACACCTGAAGCAAAG Gene GeneID:534705|TLK2:XM_002696061:381_cdna UTR3_Alt 3 NULL GeneID:534705 19 GENE TLK2 NULL tousled-like kinase 2 EMBV3_15732 CTATGACTTTCCAGGATCAGTCAAAAGCATGGTCAGATCTGATGATATATAATTCAGGCC Gene BVT0102_364226 + 0 NULL GK000001.2:68896351-68906810 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13858 CTGGCCGTGGGTGGCCGCGAGATCCTCAAGAATCCTGGTTTTGACTTCAGTGGAGCAGAA Variant GeneID:532693|NUDCD2:NM_001040553:11_cdna 405^605 1 EMBV3_17592 GeneID:532693 7 GENE NUDCD2 MGC133489 NudC domain containing 2 EMBV3_04399 TTTGACATTTCAGTGGACAGTCTGGCTCAGGAAGAAGTTCTAAAGGATTTTGAGGAATTG Variant GeneID:508940|THUMPD3:NM_001038062:71_cdna 333^410 1 EMBV3_26520 GeneID:508940 22 GENE THUMPD3 MGC133599 THUMP domain containing 3 EMBV3_11576 AAGAAGACCCGAGTTTACTACAGGCTACCCCAGAGCTACCGCCAAGACTTGCTGGCGGAT Gene GeneID:615989|LOC615989:XM_002686393:239_cdna Constitutive 0 NULL GeneID:615989 3 GENE LOC615989 NULL similar to Protein FAM151A EMBV3_16505 CTCCACTGTGTAAGAGGAGGGAAGTCTCCGAAATTTGTTCTCTTCGGTGGGGCTGGCAAA Gene BVT0102_161962 + 1 EMBV3_21972 GK000007.2:98924530-98947943 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214712 TCONS_00214713 TCONS_00214709 TCONS_00214710 TCONS_00214708 TCONS_00214711 1 XLOC_130751 Coding TCONS_00214708 XLOC_130751 Coding Coding LOC100296257 7:98913674-98944000 j TSS160528 1661 1 TCONS_00214708_3 495 0.0638169777242625 10 0.94555647155812 2.31292055158204e-11 0.000234888901387909 0.000136564922348839 1.19749275011189e-10 4.14897818120973e-05 4.67479288994764e-12 9.71524809407901e-12 6.18310475483723e-05 0.000269520034068661 6.81539074775312e-12 0 0 3.3906517131592e-13 3.11036991985015e-11 3.41553734998748e-05 0 0 0 0.000303559183492026 0.000326959990457866 2.29434130481847e-11 0 0 0 0.000139364336274939 0.000325317707992025 0.000374921088388243 0 0 0 XM_002704677.3 LOC100296257 PREDICTED: Bos taurus 2'-5'-oligoadenylate synthase 1-like (LOC100296257), mRNA. 0.0 2462 100.00 0.821192052980132 TCONS_00214708_3 sp|P00973|OAS1_HUMAN OAS1_HUMAN 2'-5'-oligoadenylate synthase 1; 1e-30 123 28.76 0.563636363636364 1 coding 0 0 0 0 0.0644198033906366 0.571833936828168 -0.0172844571200799 0.733247228089669 GAAATCAGGAGGACACTTGCTGGAACAAATGGACCAGGTAGTTGCTTGGACTCTGAATACCCACAAGGGGCCAAGGAACCACAGAGGAAAGGCGTGTCTGGACTTACCTTCTGGCTAGCTCGCCAAACCTGTCACTGAACCAGGATCTAAATCTGATCCTTCACTGGGAAAGGATGTGGACTCTGAAATCCTACAACTGTGAGCACTGCGGGAGTGACTTTATCAGCGGCAGGGCTCTGAAGTATCACTTTCAACAGAAGCATCTTGGAAAAGTTCACCGTGAAAAATGTGACCAAGAAGTCCTGAAGGGGAAGCAGCGAGGTCACAGTGAGTCTACACGTGACAGGTCAACCATGGAGACACACAAGCTACACTGGGAAAATCTAGAAGAAAGGAATGGAAAATATATGGATACAAACATATCAAAAACATGTAGGATGTGTTCTAGACGCTTTGGGACAGTCCTTAGTCGGGAGAACCATGAAATACAAGACCATCACTTTACAGCCCGCAAAAGAGCCCAAATGTCCACAGGATTTTCACCTCATAATATGTTGGAGTGTAAAGGTCCCCAAGAGCTACAGAGATTTGCAGACCGAAAAATCTGCCCTGCCTCTGGTTCTCAAAGAGCTGCTTGTGCAGCTGAGATCGGTACCCTGCTCCAGCTGATCCAGACTTCCTTTCCGGTGCCGGCCTCCCGAGTGATCCAGGGTGGTTCTTATGTGAAAGGGACCGACACCCAAGGATGCTCGGAGATTGACATCATCCTGCTCAGTGAGGTGTTTGCCGATGTGAACCATTTCAAGAAACAACTGAGAGAAGGGTTGGAGACTCTGAGAGAAAGCTTGACGCGAACTGCATATGGGAACAGGATACTAATGGGAAAGAGAACACCACTGTCTCTAAGATTCAGTTTTTTATGTACTGAAAGTCTTCACAGCCATTCCTTTGAGATCATGGCTTACTATGATATCCTGGGACCTACACCTTCCACAGATTTAAAACTTCACCTTTACTGCAAGCTATACCCTTGTAAGGACAGTGACGAGGCCCAGCTGTGTGCCTTGGCCCTCGTACGATACCAAGTGGATTTCGTCAAGGCCTCTGTCGTAAGGGTGAAGGAGCTCATTCGTTTAATGATACATTGGCTCAAGACATCATTTGCCAGCCCCACCGAAGAGAACAAATTTCGGAGACTTCCCTCCTCTTACACAGTGGAGCTCCTCACCATATATATCTGGGAACGGGCGGAGAAGCCCCTGTCCTTCAGCCTGGTGCAGGGAATGAGGGCAGTCCTCAAACTTCTGGTTCAATACGCAGATATCGACGTGGTTTGGCACCGACACTATCCTCGCAAGTTCCCCGTTCTTGTAAAAGTTACCCAGAAGCGCACGAGGCCATTCATTTTAGACCCTGTAAATCCTACTGTCAACGTGTGTGACACCTGCAATGCCTGGGATGAAGTTGCCCATGTGGCGAAACTTAGCTTACGGAAGCCTCTCTTCAGCGGATTCTGGATTCACCACTGCCGGGAAGAGAATGTCTCACTCTGCTACGATGTAAGAATGAAACTGCTGGCCGCCATCTTGCTGCTCCAAGGGGAGAGAGCCTTACTAAAAATGGAGCCAACACAAAAGAAAGGAGATTTGAGAAATGAGTAG EMBV3_40504 TTTAGACGGGGGCGAGGAGGGACGGGAGTGTTCCTGAATGAAATGCTTCTGAGGTTGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15794 AGCCTGCCACCCGTCTTCACCCATCAGAAGCCAGACCTTACCCTGATTTGACATCCAGTG Gene GeneID:280714|AHR:XM_002686683:91_cdna Constitutive 0 NULL GeneID:280714 4 GENE AHR NULL aryl hydrocarbon receptor EMBV3_02851 CACACACATATGTATACACAGGGAGAGAAACAGAGAGAGGAATAGAGTGTGTGTGTGTGT Gene GeneID:521137|LRRTM4:XM_002691372:238_cdna Constitutive 0 NULL GeneID:521137 11 GENE LRRTM4 NULL leucine rich repeat transmembrane neuronal 4 EMBV3_12250 TTGTCAACTCCATGAAACAGAGGCCCCTCAAAACCTACAAGCCAGGTTCACTGACGTTCC Gene GeneID:534217|AIFM2:NM_001040556:371_cdna Constitutive 0 NULL GeneID:534217 28 GENE AIFM2 AMID apoptosis-inducing factor, mitochondrion-associated, 2 EMBV3_11160 TAGTGGCTGCTGCCTGTACCTGTGGCTTTACTGTCGCGCAGATCATCACATCCTTGGTAT Gene GeneID:532341|LOC532341:XM_002685942:110_cdna Constitutive 0 NULL GeneID:532341 3 GENE LOC532341 NULL similar to putative olfactory receptor 10K3 EMBV3_15346 GCTATCAGATGTTTTAGAGTAATTGTATCTGCAGCGCTTGTTCTCCCGTGCACTGCTATG Gene BVT0101_003170 + 0 NULL GK000002.2:89925168-89936308 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105753 TCONS_00105756 TCONS_00105755 TCONS_00105759 TCONS_00105760 TCONS_00105752 TCONS_00105757 TCONS_00105751 TCONS_00105761 TCONS_00105762 TCONS_00105764 TCONS_00105758 TCONS_00105754 1 XLOC_062636 Coding TCONS_00105764 XLOC_062636 Coding Coding CLK1 2:89923538-89927919 j TSS77958 725 1 TCONS_00105764_3 184 6 0.835844748858448 0.00102659068790526 0.00128944701035617 0.00114223992133809 3.66816243480943e-05 0.00156724081218463 1.27834592021844e-102 0.000285878735379492 0.000403588881957453 0.000387450981487183 0.00164186076830237 0.000585915234523089 3.94173748386435e-49 0.00142613558293947 1.53118133099776e-279 9.65111286406289e-05 4.70016311313705e-08 0.0126836169659634 0.00830073225807842 0.0032025859255162 0.000458792273755661 0.000847219231408871 6.07211286599013e-63 2.93223946481383e-187 2.29300235304926e-16 0.00100626264757171 0.00185854828778128 0.000681578933704039 0.000337805756388646 0.000187214524071005 0.00248218077964598 XM_005202667.1 CLK1 PREDICTED: Bos taurus CDC-like kinase 1 (CLK1), transcript variant 0.0 1308 100.00 0.998620689655172 NM_004071.3 CLK1 Homo sapiens CDC-like kinase 1 (CLK1), transcript variant 1, mRNA. 0.0 919 88.29 0.995862068965517 TCONS_00105764_3 sp|P49759|CLK1_HUMAN CLK1_HUMAN Dual specificity protein kinase CLK1; 2e-102 308 89.13 0.994565217391304 0 coding 1 1 1 1 0.00787457467288854 0.950189767553032 0.0145761426489167 0.827516001678459 GCCCCGCCCGGAGGCGGAGACGCGCTTGCCTAGTCATCTTGTTTTCCAAACGTCCAGACGCTGCGGTTGTTAGCTCCATACTGCCGTGGGAGCTTGTCGCAGCGAGCTGGTTTTTTTCCGTGGTTGTGTTGCAAGCATTGCCTCCTTAGGCTTGGACTCTTTGGCCAACACGATGAGACACTCAAAAAGAAGTTACTGTCCTGATTGGGATGAAAAAGATTGGGATTATGGAAAATGGAAGAGCAGCAGCGGCAGTCATAAAAGAAAGAAGAGATCGCATAGCAGTGCACGGGAGAACAAGCGCTGCAGATACAATTACTCTAAAACATCTGATAGCTATTACCTGGAAAGCAGATCCTTAAATGAGAAAGATTATCATAGTCGACGCTACATTGATGAATACAGAAATGACTACAGTCAAGGATGTGAACCTGGACATCGACATAAAGATTATGAAAGCAGATATCAGAACCATAGTAGCAAGTCCTCTGGTAGAAGTGGAAGAAGTAGTTATAAAAGCAAACACAGAATTCACGACAGCACTTCATATCATTGTTCACATGGGAAGAGTCACCGAAGGAAAAGAACCAGGAGTGTAGAGGATGATGAGGAGGGTCACCTGATCTGTCAGAGTGGAGACGTACTAAGTGCAAGATATGAAATTGTTGATACTTTAGGTGAAGGAGCTTTTGGAAAAGTTGTGGAGTGCATTGATCATAAAGCGG EMBV3_18800 GGGAGGTCCCAGGAGAAAAACACCAACAGATGACTTGGACAGTATTACCTCAGGGGTTCA Gene BVT0102_105450 + 0 NULL GK000008.2:28924567-29022126 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00169477 TCONS_00013240 TCONS_00013237 TCONS_00243948 TCONS_00232026 TCONS_00098385 TCONS_00088693 TCONS_00154811 TCONS_00169479 TCONS_00025106 TCONS_00137852 TCONS_00025108 TCONS_00230483 TCONS_00029929 TCONS_00252175 TCONS_00172905 TCONS_00243949 TCONS_00202431 TCONS_00056222 TCONS_00000314 TCONS_00207060 TCONS_00132257 TCONS_00222044 TCONS_00135546 TCONS_00169478 TCONS_00013239 TCONS_00252807 TCONS_00154809 TCONS_00164253 TCONS_00042246 TCONS_00117782 TCONS_00154810 TCONS_00013238 TCONS_00154253 TCONS_00202430 TCONS_00110376 TCONS_00238548 TCONS_00130398 TCONS_00154812 29 XLOC_085141 XLOC_103372 XLOC_008038 XLOC_150314 XLOC_141513 XLOC_058631 XLOC_053479 XLOC_094549 XLOC_014669 XLOC_084061 XLOC_139973 XLOC_016184 XLOC_155116 XLOC_104243 XLOC_123974 XLOC_034025 XLOC_000088 XLOC_125579 XLOC_080738 XLOC_135353 XLOC_081769 XLOC_155748 XLOC_100173 XLOC_025624 XLOC_071948 XLOC_094013 XLOC_066280 XLOC_145215 XLOC_079107 Coding TCONS_00088693 XLOC_053479 Coding Coding - 18:16253891-16262851 - TSS66039 8960 3 TCONS_00088693_16 322 0.833816964285714 1 0 1.16138100847541e-05 7.96429858026615e-06 3.07256028026004e-06 4.42709753766115e-06 5.69941641360114e-06 9.36986144176691e-06 4.17213544200926e-06 7.63046551528769e-06 8.58928521701181e-06 0.00301046678642136 0.00239831088605626 0.0015763669782467 0.000227177578259478 0.00108690726800688 0.000384144385590756 0.000790121063971953 0.000515956829006995 0.000826027671964117 4.3811848144521e-06 3.31201459449274e-06 1.09063433137715e-06 0.000992635426179298 0.00198119839159111 0.00142769773920594 7.68687460946034e-06 8.69637334773621e-07 3.2494649242946e-06 0.00389999415994786 0.00174588384334866 0.00262377460897209 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2360 89.00 0.197767857142857 TCONS_00088693_12 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 4e-25 107 34.00 0.878228782287823 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 TTAAGTAGGCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATACAAAAGGAGGAGCCAAAGCGTTTTCTCTCGGACTCTCTCTCCCGCGTGCGTGCGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACATGGTTTGTCCAAGACCCGAGAGCTGTGATGTGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAAACAAAGAACCGAGGAACATACACTCGCGTGACATCTATGGTGCCGTGACTCGGATATAACCTGGCTGAAACAACCTCTGCATGGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGTGAAGCTCCCGCGCTAGAAGCGAAAGGTGAAGAAACTCAGTGCAGGGGAAGGCCCATCGTGCTGGAAACCGGGACAACGAAAACCGAACTCAGCACAAAGCTCACGCGGCCCAGTCTCAGATTCCAGAAGACCTCCAGTTAAGGTAAGAGGTCCTCGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCTTTCTTGTTTCCTCAAACCTCCCGCGAACAGGCGGGCAGCAGGGGCACAACTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACCCAAGCTGGTGGGGGTTCTTCTGTCCTTTCTCTTCTCTGTGCCAAAGATCAGACCAATGAAACTGTGAGCACCGGTCAGATATTTAGCAAATTTTCCGGCGGGCTATGAAGGGGATTCCTTGGCATGTTTTTCCCACTGCTTTTTCCTCTTGTCCTTCAGCTCTCTCCCGGGACTCAAGCCCAGCCAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAGATTTGTTAGGATCCAGAGAGAAGTCACCCTTCGGGGTATGAACCATTGCCGAGGGCAAGGGCTTCGGCCATGGTATTAGGCCTGGCTAGGTTTTGTGAGGGAATGGAATTCATATGCTAATGAGTGAGAGGATAATCCCAGCCATTGGGGAACCACCCATCCTCCCTCTTTTACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTGGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTCACTTGAAGTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACATTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCCCTTCCCTCCTGTTTTGTGCTCTTTTCCTAAGCCCCATCCAGACCCACAAGGTTGCCTCTACAATCTTCTGAAGAGACAATCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCTAATCCTACCCAATACTGGTCACATTGGAGATCTTGGGGACGCCCAAACTCCAGTCCCGGGGGTCCCAGGAGGTCATCACGCCTTGACTTGCCTAGGGATCGGTCTTCGAGAGGTTGTCACGCCTCAACCTGTTTGGGGATCCTCTAGTCCCAGGGGTCCCAGGAGGTCATCACGCCTCGACCTGCCCAGGGACCCAATCCTCAGGAGGCTGTCACACCTCAACCTGCCCGGGGATTCGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTGCACCCTGACCCAGGGACGCCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAGAAAGACTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAGCCTATTACTTGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCCATTGCCTTTCTGGAGAGGCTAAAAGAGGCGCTCCAAAAGTTTACCAACCTGGACTTAGACTCTTACGAGGGACGGGTGATTTTAAAGGACAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAGAAAGAAAGAGACAAGGCATGCCCAGATGCTGGCTGCCCTCCAGAGAAGCCCTATGGCAAACCCCGAGTCCTTGAGGGACAAGGCACGAGACAGATGCCTGATCTGTAGACAGGCGGGGTATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATCGGGCGACACTCTGCCCCCGGGACCCAAGAGCCTCAAGGTCAAGTGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGCAGCCCGCTCCAGCCAGCCCGCCTGTCACAGATAACCATCACGGGGCTGGAGCCAAGGGTGCAACTGGATGTGGCAGGTAGGTCTGAGAATTTCTTGATTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCAAAACCTGTACCATTTTGGGTGCTACACGAAAAGCAACTACTAAAAGATTCACCCGAGCACTTCTTTGTTGCTGGGATGGACAAATATTTTCCCACCAGTTTATGGTGGTCCCTGAGTGTCCTACCCCCTTATTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAACCCATTACACCTTCAATAGAGAGGGACCAAAAACTATGGGAAGACAAAATCAACCCCCAGGTGCTGGACGAGCCCACCGAGCTGAACCGGTCATCATTGTCCTCCGAGATCCCACTCGATTTCCTAATTGGAAACAATATCCTCTCAAAAGAGAGGCTCGGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGCTTGCGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCCCAGTAAAGAAAAAAGACGGAACCTGGCGAATGGTCCAAGATCTCCAGATCATAAATGAAAATGTAGTCCCCCTCCATCCCACAGTACCCAATCCCTATGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACCACTGACTAAAGAATCCCAATACCTTTTTGCCTTTGAGTGGGAGGCCCCAGGAGAAAAAAACCAACAGATGACTTGGACAGTATTACCTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGACAGGCCCTTAGCCGGGATCTCCTAGATCTGGACCTGGGACCTAATGAGAAAATATTACAATATGTAGATGATCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGATCGGGTACAAGAAATCCTCCAGTTGCCCTCCCCCACGACTTGAAAACAATTGTGAGCTTTCCTGGGACTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCGGCCCTTATATGAAAGCTTATAGGGACGAGATGATTCAATCCCACTGATGTGAGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTATGTCAATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCGATCCAACTTCCCGAGGTTGGCCCCCCTGCATTCGAAATATTGCAGCATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATGGGAGAGGCCATTTATGGATGTCTGATCAAAGAATCCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTCCCTACCCCTGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCCGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTAGATGGAAAAAGAAGAGCTGGGTATGCAGTAGTCTCCAATTTTGAGACCATAGAGGCTAAGCCTCTGCAACCAGGTACTTCAGCCCAATTAGCTGAGCTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAAAATAGCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGACCCCTTGACCACCCGAGGGTCCCCAATCAAATATGGTGGTCAGATTCTTCGACTCTTGGAGGCAGTCCATCTGCCCACTGAGGTTTCAGTCTCCCACTGTAAAGGACACCAAAAAGGGAACACAGAAGTGGCACGAGGGAACCAAGCATCTGATCAGGCAGCTAGGAGAGCAGCATTACAGAACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATTTGGGGTTAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGATAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCCTCCAAATACTACTAGAAAGGTCCTTCAGAGGAACAGGCCTCCAAACAACTATAAGACAGGTGGTCTCCTTTTGTCTCACTTGCCAATTAAACAACTCCCAAGGAGCTCAAAGACCCCAGCTGGCCCAGCCCATCCAACGATGTGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAGTACCTATTAGTTATGATAGATACATTCACAGGATGGATTGAAGGCTTTCCCACCCGGACTGAGAAGGCTGAGGAGGTGGTAAAAAAAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCCAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGCATTGGGCATTACTTATTATCTCCATTGTGCCTGGAGGTCTCAATCTTCAGGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCCGCACCTGCATTGCCCCTAAGGAACAGGTTGGTCTTAGTCCTTATGAGATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGACCATTGGGCAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGAACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCAAGAGTCAAGCCATGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGATACCTATTCAGAACTACCAATGAGTGCCATTCTAATGAACACCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGGATAACTCTAAGGAGCCAACAGAGCTTGACAGAGACTGTACTCCAAAACAGACAGGAGATAGATCTTCTGATCCCTAAACAAGGAGTGACTTGAGCTATCCTGGCGATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCGTGTTATGCTATATTGATGATGCTTATGATTATTCTATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTACAGCTGACCACGGAAAATATCACACAGCCTTGGACACCGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCACTGCCCCATTTCAGCAGGAAGTAGCCAGAAAGACCTCAACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGAATGTTAGGTAGTCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAAACATATAAAAGGAGGAGCCAAAGAGCTTTCTCTTGGACTCTATCTCCCACGTGCGTGTGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACACGGTTTGTCCAAGACCCGAGAGCTGTGATGCGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAGACAAAGAACTGAGGAACGTACACTCATGTGACAGAAAGCTAATTGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCTTAAAGGAAATCAGTCCTGAACATTCATTGGAAGGACTGATTTTGAAGCTGAAACTCTAATACTTTGGCCACCTGATGCGAAGAACTGACTCATTTGAAAAGACCCTGATACTGGGAAAGATTGAAGGCAGAAGGAGTAGGGAATGACGGAGGATGAGATGGTAGAATAGCATCACCAATTCAATGGACATGAGTTTGAGTAAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCGTGGGGTTGCAAAGAGTTGGACATGCCTGAGCAACTGAACTGAACACAGAAGCCACGTTTTTGGCCTCATGTTCTTCACCGTGAGTGTGCTTTCCAGTTCACTGCATCCCTCTCAGCCCTTCCTTTTCCACTTGACCTGCTTCACGCATTCATTCATCCTTTGTGGTCTTTTTGTGGCCTCTAACTCCTTGTTCATTTGTTTTAATATTTTGAGGGCTGTGGATCTTTTTGAGGATCAGTGGAAACTCTAAAATGACTCACATATCACACATAAGATAAAATGTTATATATGATTTCAGGATACTTAGAACTGCCCTGGATCCATCCAGGGATGAGCCCCCTTCTTGAGATGCACGGACCCCTTTACCTCAGTTATATTGAAGATATTTTGGCACACTGGAGTTGAAGGATTCTTTGCAATCTTCTGCTTCTCTGGAGTGGAGAAATCTCTGTCAGAGCTATCCACATGTAACTGTGCACGTATTTGTCATATACAAGGTCAAGTGCCCATATCCTCAAAACAAAGGGTTGTCCTAGCACACACAGAACATGATTAAGGGGAGTTGGCATGACTATCTGAGGGAGTATCCCTAAGGTCTTTGACAGTTTTCCACAGGAATCTGAAAAGAGATTGTCTTTGACCAGATTCTGGATAAAACCTAGACATAGGCATTGCTATTGAGCTGTTTCTTATCCTCATAGAAAAATGCATTTATTGAGAGAAAAGCCTCTTCCTGAGAGAAAAGGGGAAGAGGGTTCTTCCAAGAGGCTTAGAAGTGACTTTGCTCAGCAAATGGCTATTTATCCTCTCAAGTGATTGATAATATGCATTAAAAATCACCTTTGTGATTAGAGAAGAAGTTCTCTTAGTGGCTCCCTCCCAGGGGAAGGGTGGGGAGCTGGCTTTTATCAGAGCTCATCTTCCCAGGGAGGGTAGAGAATGAGGAACCCAAGAACAGTGAGCTTGGTCACCAAGAGAATTGAATTATAGTCCCATGAGATCATGCTGTCAGCTAGACTGCTTATCACATGTAAATCTGCTGCAAGCCTATGAGTTAGATTCTATTATTCCTGTTTTACATATACGGACACTGAGGCACAGAAAGGTAAGGTGATTTACCGCAGGTCACAAATCTTGGAGGCAATGGGTCAGGCCAACCTGACTCTGTCAAATACAGTCTTATCTACAATGCTGAGAGCTGCTCGGTGTGTGAGTGGGTGAGAGACTCAGGCTCCCCATATCAGCGTGAGTCATACTTGGTGGTGAAGGGAGGAGGAGGAGCGCAGGGCAAGATGCCAGCCAACTCCTGCAGCATCTCCTCCCTGAACGCAGCACCACAGAGCAGCAACTTCTCCTGTGAGAGGAGCCATAGAAGTTGCTTAAGGGAGCCCAAAGGGGATTCTATTCAGAATAGGAAGCAGACAGCCAACCTAAACTATCTCCCTGAAGGTGTGAAAACTCTTGGCTCTGACTTAATAACTAGTTACATTAACTTAGTACCTAAACTCTGCAAGGTCCCTTCTCTGGCATCATTTCATTTTCCTCTGAAATAACCTTGGAGCATTGCACATTTATTTCACCCACTTTTCTGCTTATACATTATCTTTCATAATAAAAAGGCAAAAGAATTCACATATACAACTCA TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 97374 TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 106333 EMBV3_02558 GTCACCTACTTCAAGACAATGCCTGATCTGCACTCCCAGCCCGTCCTCTTCATACCTGAT Gene GeneID:519918|GRHL2:XM_002692794:84_cdna Constitutive 0 NULL GeneID:519918 14 GENE GRHL2 NULL grainyhead-like 2 (Drosophila) EMBV3_20238 CGAGCAGTAGACAGAAACTCCTTAAAGTCTGCTATCTCTAACATTGCCCAGGCATCTCTG Gene GeneID:534256|CLCA2:XM_002686307:202_cdna Constitutive 0 NULL GeneID:534256 3 GENE CLCA2 NULL chloride channel accessory 2 EMBV3_37173 CACAGCCCTGCAGCTGGGGGCAGAGTTCAGATTTATTATCTAGGATAGATTTGGATGAAC Variant GeneID:617002|LOC617002:XM_002689392:5_cdna 136^259 1 EMBV3_09798 GeneID:617002 7 GENE LOC617002 NULL similar to CG10038 CG10038-PB EMBV3_33661 GCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGG Gene BVT0102_062677 + 1 EMBV3_10676 GK000026.2:40060835-40118555 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00179596 TCONS_00171161 TCONS_00132043 TCONS_00098385 TCONS_00088693 TCONS_00031871 TCONS_00099834 TCONS_00140493 TCONS_00174545 TCONS_00199297 TCONS_00025106 TCONS_00137852 TCONS_00025108 TCONS_00178137 TCONS_00226267 TCONS_00230483 TCONS_00252175 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00056222 TCONS_00000314 TCONS_00132257 TCONS_00222044 TCONS_00135546 TCONS_00174540 TCONS_00174543 TCONS_00226268 TCONS_00187309 TCONS_00164253 TCONS_00042246 TCONS_00117782 TCONS_00171162 TCONS_00132044 TCONS_00221594 TCONS_00071868 TCONS_00174544 TCONS_00174546 TCONS_00031828 TCONS_00202430 TCONS_00110376 TCONS_00238548 TCONS_00233207 32 XLOC_085141 XLOC_109368 XLOC_103753 XLOC_080693 XLOC_058631 XLOC_053479 XLOC_018116 XLOC_060077 XLOC_104638 XLOC_120950 XLOC_014669 XLOC_084061 XLOC_107910 XLOC_137960 XLOC_139973 XLOC_155116 XLOC_123974 XLOC_034025 XLOC_000088 XLOC_080738 XLOC_135353 XLOC_081769 XLOC_113357 XLOC_100173 XLOC_025624 XLOC_071948 XLOC_134908 XLOC_043638 XLOC_018073 XLOC_066280 XLOC_145215 XLOC_142689 Coding TCONS_00179596 XLOC_109368 Coding Coding - 3:99968921-99976242 - TSS134355 7321 2 TCONS_00179596_16 405 0.995082638983745 1 0 2.2899730733807e-05 2.87794733106343e-05 1.46660483268652e-06 6.61670287463767e-07 1.53646147036544e-06 6.28636240086872e-07 5.72528955562941e-06 1.21959670911563e-05 5.74881503638329e-06 0.000780002652451121 0.000524875399509416 0.000765542978596544 0.000139250951259028 0.000374871407518322 4.26007064693583e-05 0.00240846066750101 0.00195592431671475 0.00489058798563395 1.09503770484616e-05 4.87551939026511e-06 1.22570456212253e-06 0.0026724491859505 0.0033515583835469 0.00270820785064512 1.27136386568317e-06 4.52394845141639e-06 5.25248538403041e-06 0.00182989328022288 0.0018967866127545 0.0033944148952754 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2479 90.46 0.246414424258981 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 6e-08 66.2 69.48 0.0208987843190821 TCONS_00179596_12 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 2e-25 110 28.41 0.723287671232877 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACACATAAAAGGAAGAGCCAAAGCGCTCTCATGGACTCTCTCTCCTGCGTTCATGCGCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCTTAAGAGCTGTAGCATGGTTCCAAGACCCAAGAGCTGTGATGCGCTGAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACATACACTCGTGTGACATCTATGGTGCCGTGACTCGGGTTTAACCTGGCTGAAACAACCTTTGCGCAGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGCAAAACTCCCGCACTAGAAGTGGAAAGCGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACTGGGACAGTGAAAATAGAACTCAGCAGAAAGCTCACGTGGCCCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGTAAGAGGTCCTTGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCATTTCTTGTTTCCTCAAACCTCCCACAAACAGGCAGGCAGCAGGGGAACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGGTGGGGGTTCTTCTGTCCTTTATCCTGTGCCAAGGATCAGACCAATAAAATTATGAGGACCGGTCAGATATTTAGCAAATCTTCCAGTGGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCTGGCTAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAAATTTGTTAGGATCCAGAGAGAAGCCACCCTTCAGGGTGTGAACTGTTGGCAAGGTCAAGGGCTGGGGCCATGGAATTAGGCCGGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATAAGTGAGAGGACCATCCCAGCCATTGGGGAACCACCCACTCATCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTAGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACACTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCTCTTCCCTCCTGTTTCATGCTCTTTTCCTGATCCCCATCCAGACCCACAAGCCTGCCTCTACAATCTTCTGGAGAGACAACCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGGATGCCCAAACTCCAGTCCGGGGGGGTCCCAGGAGGTCATCACACCTTGACCTGCCTAGAGATCAGTCTTCGAAAGGTTGTCACACCTTAACCTGTTGGGGATCCTCTAGTCCGAGGGGTCCCATGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGCCATCACGCCTCGACCTGCCCGGGGATTTGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTACACCCTGACCCAGGGACACCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAAAAGATTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAACCTATTACTCGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCATTGCCTTTCTGGAGAGGTTAAAAGAGGCACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGATAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGACAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAAAAAGAGACAAGGCATGCTCAGATGCTGGCCGCCCTCCAGAAAAGCCCTATGGCAAACCCAGAGTCCTTGAAGGACAAGGCACAAGACAAATGCCTAATCTATAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGCAGCACTCTGCCCTGGGGACCCAAGAGCCTCAAGGTCAAGAGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGTGGCCTGCTCCAGCCAGCCCGCCAGTCACAGATAACCATCACGGGGCTGGAGCCAAGAGTGCACCTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTCCAGGAAAAGCAACTACTAAAAGATTGACCTGAGCACTTCTTTGTTGCTGGGATGGACAAATTTTCCCATCAGTTTCTGGTGGTCCCTGAGTGTCCTACTCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAATCCATTACACCTTCAATAGAGAGGGGCCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGCCCACCAAGCTGAACCAGTCATCATTATCCTCCGAGACCCTACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGGCTCAGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGTTTGTGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGAAAACAGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCTATCCCACAGTACCCAATCCCTACGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACTACTGGCTAAAGAATCCCAATATCGTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACACCAACAGATGACTTGGACGGTATTACTTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGAAAGGCCCTTAGCCAGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGTACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCAAAAACAATTGCGAGCTTTCCTGGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGATGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGTCTGTAGCTTACTTATTCAAGAGGCTCGATCCAACTTCCCAAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATTGGAGAGGCCATTTATGGATGTCTGATCAAAGAATTCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCAGGTATGCAGTAGTCTCCAATTTTGAGACCACAGAGGCTAGGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAACTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATATCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCAACTCTTGGAGGCAGTCCATCTGCCCACTGAGATTTTCAGTCTCCCACTGCAAAAGACACCAAAAAGGGAGCAGGGAAGTGACACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTAAGAGACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATATCGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCTTCCAAATATTACTAGAAAGGTCCTTCAGAGGAACAGGCGTCCAAACAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACATGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGACATATACATTCACAGGATGGATTGAAGGCTTTCCCACCCAGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCTAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGTATCGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAAGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGCATTGCCTCTGAGGAACAGGTTGGTCTTAGTCCTTATGATATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACACTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAGCCCACATGGAAGGGCCCCTACCCTGTAATACCTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGACACCTATTCAGAACTACCAGTGAGTGCCTTCTAATGAACACCCCCAAAATCTGGTTTCTGGGTATAAAATTTCTCAGGATAACCCTAAAGAGCCAACACAGCTTGACAGATACTGTACTCCAAAACAGAGAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCCATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATACAAAACTACAACTGACCACGGAAAATATCACACACCCTTGGACACTGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAAGGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGAAAGTAGCCAGAAAGACCTCGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATTTCTTGAGGGGGGAATATTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCAAGGACCAGAGTGAAGACTTCAGGTAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATTAAAAGGAAGAGCCAAAGTGCTTTCTCATGGACTCTCTCTCCTGCGTGTGTGCGCTCTTCCTCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATACAGCTGTAACACTGATTTACTTAAGAGCTGTAGCATGGTTTGTCCAAGACCCAAGAGCTGTGACGTGCCAAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGTAGGAAAGTAGGATACATGTTTTGAGTAAAAAAGGATTTTTATGCATGGCTGGGCTGAGATTAGGTTAAACTTATTCAGGTAAATGGATTTTGTTATTAAAAGTAGACTGGTGCAGGACTAGATTTGGTTCCTCTATTCTAAGAGAACATGTTTACTTAGAATGCTGCTTTTGATAAGATTGTATGAACTTGCCTTTAAGTGATCTGTATTTGTTTTTAAATAGTCACAGTGACCTATGATTCTATCTGACCAAATATTTTTAAAACTTTTTGATATTTTTTATGCACTTCCTATCAAATTCTAATTAAAGTTCTTTTGACTTCAGCTAGCTTGGAGATGCTTCAGAGGGCCCTTCAGAAAAAAATTTAATATAATTTAAAACTACATATATTCATATTAAACTGGCTAGAATTGGTTGATATGTTAAATTACACAGAAGTCAGTGAATGATCAGCCTCCTCAGATTATATGTTATGAATAAATTTTATTAATACAGACATTCTAGAAACTA TCONS_00174208 . 5' 11514 TCONS_00174208 . 5' 11514 EMBV3_41881 GGCCAAGCCCGCCTGTTTTGCCAAGTTGAGACATTCTTAGGTATTAGCAACAGAAATATC Gene GeneID:280916|RP1:NM_173958:5_cdna Constitutive 0 NULL GeneID:280916 14 GENE RP1 NULL retinitis pigmentosa 1 (autosomal dominant) EMBV3_01067 TAGATTCCGTGAAAACCCCGGACCAAGCGATTCTCTGGCTTTGGAAGAAGCATAACCTGG Gene GeneID:788063|QSOX2:XM_002691616:263_cdna UTR3_Alt 2 NULL GeneID:788063 11 GENE QSOX2 NULL quiescin Q6 sulfhydryl oxidase 2 EMBV3_19206 GAGACATGATTTATTGCAGCCATCCATCTTGGGGGCTCATCCATCACACCCGGGTTGCTA Gene BVV0102_045721 + 1 EMBV3_38453 GK000018.2:42046249-42253544 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090162 1 XLOC_054943 NonCoding TCONS_00090162 XLOC_054943 NonCoding NonCoding - 18:42047203-42047975 - TSS67508 772 1 TCONS_00090162_1 68 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000140144698389963 0 0 0 0.000520020643428694 0 0 0 0 0 0 0 0 0 6.22096618789452e-05 0 0 0 noncoding 0 0 0 0 0.0771059383321297 0.610727376281655 0.00707518485566211 0.879732159614765 ACTGCAGAGTGCATATTTTATCAGCCCTCAGCTGCTTAAGTGTCTAGAAAAGACCAGGCAGTTTTTCTTTCTTTCTTTCTTTCCTTTTTTTTTTTCCAGGCAACCCAGAGCAAGTACTTGCAAGGGTCATATCTTTTTAATTATCTTTTCTCTCTTTGATTAATTATTCCGTCTGACAATAGCGTGTTTCTAATGCTATTCACCTGCCTTTGATGATTGACAACTTTTCTGTCTGATTCAGAGCAAACAGCTGCTGCCACAATCTCCTAGCAACCCGGGTGTGATGGATGAGCCCCCAAGATGGATGGCTGCAATAAATCATGTCTCCAGCCATAAAACTGAGAAAAGGGGATAAGAAGAAAAGCGAACAAAAAACAAAACAAGGTTTCTTCCCGTGAGTGCACTCAGTTCCTTACCAATTACACCTGAAATGGACTTTGCACCTCTTAATAGCAAAGTTTTTCTAATCAGTAAAAATGGGATGATGCCATTTGTATCAAAGGTGTTTACAATTGTTCCTGCAAACTGGCACTTGTACTCCAATTACCTCCAACACTGCCCAAGTGCAAGGGCAGAGGATCAAAGTTTTGCTTTCTTCCTTGAAGTCTCGGCAAGAAACAATATCATCTTTCTATAGTCAGATGTGATTCCAGACACCAACAAAGGCCATATATCTGATTCCACCCAATTTTTGGCAGCAGCTGGACAACACCAAAAGTGACTCCTAAGTCAGCCTGTGCATAGTGTCAGGCTGCTAATAAAGTTATTTCAA TCONS_00086232 . 5' 52615 TCONS_00086232 . 5' 52615 EMBV3_36712 GAGGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCTCAAGACG Gene BVT0102_239240 + 0 NULL GK000001.2:128536372-128686422 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005187 TCONS_00005190 TCONS_00005185 TCONS_00005186 TCONS_00005191 TCONS_00005193 TCONS_00005192 TCONS_00005189 TCONS_00005188 1 XLOC_001199 Coding TCONS_00005192 XLOC_001199 Coding Coding ZBTB38 1:128532441-128593134 = TSS2569 4151 1 TCONS_00005192_6 1204 4 0.931671389969024 0.00129556976632865 0.00202341708184781 0.00207002290969776 0.0018158870766725 0.000755370000195744 0.00020793281662797 0.000304685518390461 0.00117631425261534 0.000370411212509396 0.00155876880798564 0.00022689023133195 0.000269210729047906 0.000194706041247191 0.00195480023367345 0.000810614760952453 0.00107625995956824 0.0040089064003754 0 0.000875257388615974 0.000649157276547217 0.000196035747372511 0.000449643569082535 2.62945103901305e-100 0.000189401840415012 0.0034857086246328 0.00142314825527415 0.00156267705347679 0.000201775254964712 2.97659787168116e-06 1.25825718954986e-65 XM_589799.6 ZBTB38 PREDICTED: Bos taurus zinc finger and BTB domain containing 38 (ZBTB38), transcript variant X1, mRNA. 0.0 7487 100.00 0.99975909419417 XM_005247257.1 ZBTB38 PREDICTED: Homo sapiens zinc finger and BTB domain containing 38 (ZBTB38), transcript variant X3, mRNA. 0.0 4792 86.03 0.986991086485184 TCONS_00005192_6 sp|Q8NAP3|ZBT38_HUMAN ZBT38_HUMAN Zinc finger and BTB domain-containing protein 38; 0.0 2212 88.79 0.999169435215947 5 coding 0 0 0 0 -0.0717193819467479 0.560532280900529 0.0201134976894952 0.684162644436256 TTGGAATCAACTGGACTTGGTTTGAATCCTAACTCTGCTGTGTGTGACTGTTGAACCAAGACTCTGAGGCTGATATGCAATGTCACTTACAACATTAATCAGATACCGCATTTAAGATCTAGATGTGGAGGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCTCAAGACGCTAACTCTTTTAAAGCTGGTCTGTTCTAACTGAGATGACAGTCATGTCCCTTTCCAGGGACCTCAAGGACAACTTACACAGCGACACAGTGCTCTCCATCTTAAACGAGCAGCGCATTCGGGGCATTTTGTGTGATGTCACTATCATTGTGGAAGACACCAAGTTTAAAGCCCACAGCAATGTCCTGGCTGCTTCAAGCCTTTATTTCAAAAACATCTTTTGGAGCCATACCATCTGTATTTCCAGCCACGTCCTGGAGCTGGACGATCTCAAAGCTGAAGTGTTTACAGAAATCCTCAATTATATCTACAGCTCCACAGTCGTCGTCAAGAGACAGGAAACTGTCACTGATCTCGCAGCTGCTGGGAAAAAGCTGGGAATATCCTTCTTGGAAGATCTTACTGATCGCAACTTCTCCAATTCCCCGGGTCCCTATGTATTCTGCATTACTGAGAAGGGAGTGGTTAAGGAAGAAAAAAATGAAAAAAGGCATGAAGAACCAGCCATCACTAATGGGCCAAGGATCACAAATGCATTTTCCATCATCGAAACAGAAAACAGTAATAACATGTTCTCCCCTCTGGACTTGAGAGCAAGTTTCAAAAAGGTCTCCGACTCCATGAGGAACACCAGCCTCTGCCTGGAGAGGACTGACGTCTGCCACGAGGTGGAGCCCGTGCGCACCCTCGCCGAGCACTCCTACGCCGTGTCTGCCGTGTCTTCCGTGGCTGAGGCTTACAGAAGTCAGCCTGCCCGGGAACAGGACAGCAGCTCACCTGCGAAAACAGGGAAGGAGAACTCTGAAGCTGTTGCAGCAAAACCGAAAACATGCCGAAAGCCAAAGACACTCTCCGTACCCCAGGAATCAGATTCCACTCCAGAAAATATACCACCCCCTCCAGCAAGCAACTTGGAGGTGCGTCAAGAAGAAAGTCCGCAGCCAGCTGCAGTTCTTTCCCTTTCAAAATCCCCCAGCCACAACGAAGGAGAGGTCCAATTTCCCAGGGCGGAGGGAAATAAATCCTCTGATGTCCCTGGGCCGCCAGCCGCCGAGGTGCCGCCTCTCGTTTACAACTGCAGCTGTTGTTCCAAATCTTTCGAGAGCAGCACTTTGCTCAGCGCCCACATGCAGCTTCACAAGCCGACCCAGGAGCCCTTGGTGTGCAAGCACTGCAACAAGCAGTTCAGCACCCTCAACAGGCTGGATCGGCATGAGCAGATCTGCATGAGGTCCAGCCACATGCCCGTTCCTGGAGGGAATCAGCGCTTCTTAGAAAACTATCCCACCATCGGGCAGAATGGAAGTTCATTCACAGGTCCAGAACCTTTATTAGCTGAGAATAGGATTGGTGACTTTTCCAGTCCCGGGAGTACGCTGCCAGAAACAGAACACATAGTTAAATTTGTTAATGGGCAAATGCTCTACAGCTGCGTGGTGTGCAAACGCAGTTATGTGACTTTATCCAGCCTCCGAAGACATGCAAATGTTCACTCCTGGAGGAGAACATATCCTTGCCATTACTGCAACAAAGTGTTTGCCTTGGCTGAGTACAGGACAAGACACGAGATTTGGCACACAGGGGAAAGGCGGTATCAGTGCATTTTCTGCCTGGAGACATTCATGACCTACTATATACTCAAAAACCACCAGAAGTCTTTCCATGCCATCGATCACAGACTTTCCATCAGTAAGAAAACAGCAAATGGAGGCTTGAAGCCTAGTGTCTATCCATATAAACTTTACAGGCTCCTGCCCATGAAATGCAAGAGGGCTCCTTACAAGAGCTACCGACATTCTTCCTATGAAAATGCTCGAGAAAACAGTCAGCTAAATGAGCCTGCACCTGGTCCCTATGTTATTCAGAATCCACACAGCTCTGAATTACCTACTCTGAATTTCCAGGACAGTGTAAACACCTTGACCAACAGTCCAGCCATCCCATTGGAAACACCAGCACGTCAGGACGTGCCCACTTCGGCCAGTATGCAAAACGCAGAAGGTACCAAATGGGGTGAGAGGGGAGAGTTAAAAGTGGATCTGGACAATAACTTTTATTCCACAGAGGTGTCGGTTTCTTCCACTGAAAACGCTGTCAGTTCGGACCCCCGAGCAGGGGATGTGCCAGTTTTGGCTGTGAGTAACGGCAGTGAGAACTCCACCTCTGTGATCAGCTACAGTGGCTCAGCCCCCTCGGTCATCGTGCACAGCAGCCAGTTTTCATCGGTGATAATGCACAGCAATGCCATTGCTGCCATGACCAGCCGCAACCCCAGAGGAGCTCCTTCAGACCAGACTGTCAGTCAGACCCCAAAAGAGGATGGCAAGCCCGCCGAGCCAGACAAAGTTGGGAGGGCCGTCAGCAGACCCAAGAGCATGAAGGAGAAAAAGAAAGCCGGCCCGTGTAGCAGGGGAGAAGTACCAGAGGAGTCCAAATTCACTGCTGATCCTGGAGGCTCACTGGGCAAAACTACAAATACCATTAAAGAAACGAGTAAAATTGAAACCTACATCGCAAAGCCCGCTCTCCCTGGAACCTCCACAAACAGCAACGTCGCACCCCTTTGTCAAATAACGGTGAAAATCGGAAATGAAGCCATTGTGAAGAGGCACATCCTCGGCTCTAAACTGTTCTATAAGAGAGGGCGGAGACCCAAGTATCAAACGCCGGAGGAGACGCTGCCCCAGGAGAGCGACCAGGAAGCCAACGGGGACAACCCTCTCGGGCTCTGCCAGTCCGAGTGCATGGAGATGAGCGAGATGTTTGACGATGCCAGTGACCAGGATTCCACGGACAAACCGTGGCGCCCGTACTACAACTACAAACCCAAGAAGAAATCCAGACAGTTGAGAAAAATGAGGAAGGCCAACTGGAGGAAGGAGCATGAAAACAGGAGCCCGAGCAGTAAGTGTAGATACCCGGCCGACCTGGACTGTGCAGTGGTGGGCAAGGCTCCGCAGGAGAAGGCCTTCGAGGAAGAGGAAAACAAAGAGATGCCTAAGCTGCAGTGTGAACTCTGCGACGACGGAGACAAAGCCTCAGGGGCCGGGAGCCAAGGGAGGCCCCACCGGCATCTCACGGCCCGGCCTTACGCATGTGAGCTCTGTGCCAAGCAGTTTCAGAGCCCCTCCACCCTCAAAATGCACATGCGGTGCCACACGGGAGAGAAGCCATACCAGTGCAAGACCTGCGGCCGGTGCTTCTCCGTGCACGGCAACCTCCAGAAGCATGAGCGCATCCACCTGGGCGTGAAGGAGTTCGTCTGTCAGTACTGCAACAAGGCCTTCACTTTGAACGAGACCCTCAAAATCCACGAAAGGATCCACACGGGAGAAAAACGATACCACTGTCAGTTCTGCTTTCAGAGTTTTTTGTATCTGTCCACGAAAAGGAATCACGAGCAGAGGCATATCAGGGAGCATAACGGGAAGGGCTATGCCTGCTTCCAGTGCCCCAAAATTTGCAAAACAGCTGCTGCTCTGGGAATGCACCAGAAGAAACACTTGTTCAAAAGCCCCAGTCAGCAGGAGAAAACGGAAGGTGACATGGGCCACGAAAACTCCAGTCCCCTGGAGAATCCACATTTCATTGATTCGGAAGGTACTGAGCAAAAGGATAATGTACAAACCATTGTTGATAATGTCCTTTGAATGGAGATCCTTAGGGGAAAAAAAACCTTTGAGAATACAAGTTGGTGGGGGTTTTTTTGTTGTTTTTTTTTTTTTAGTTAGATGTTTCTTTTGTTTCTGTTTAGTTTTGTTCACTTAACAGCTATGAAGGAGTGAAATGTAACAAAGAAAATCTCATTTGTTCAAATTCCAGAAGAAGGATCCTAATATCCTCTCTGGGTTTTAGCATTAACCTCATGCGAAGTACACAAAAACAAAATAGCCGAATCTTCCAGTATCCCAAGTGTCTTGTGAAAGTTTATGAAGTTCTAAGTTGTGATATTTTTGCCAGTGGGA EMBV3_26002 AGATGGAAACCCCAGGCGGTGCAGAAGCCTGACCTGGGTATGAGACCTGAAGTGCATGGA Variant GeneID:751575|SECTM1A:NM_001076529:159_cdna 105^275 1 EMBV3_32716 GeneID:751575 19 GENE SECTM1A NULL secreted and transmembrane protein 1A EMBV3_34910 CAGAACTCCCTGCTACTATATCAGAATTTTTATCTGGAGACTACAGTGGGTCTTGGTATC Gene BVV0102_160239 + 0 NULL GK000010.2:73384165-73433148 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014708 TCONS_00014696 TCONS_00014704 TCONS_00014697 TCONS_00014689 TCONS_00014694 TCONS_00014701 TCONS_00014703 TCONS_00014710 TCONS_00014706 TCONS_00014693 TCONS_00014707 TCONS_00014690 1 XLOC_008341 Coding TCONS_00014708 XLOC_008341 Coding Coding SLC38A6 10:73380218-73450191 = TSS10531 1423 1 TCONS_00014708_4 456 16 0.979891956782713 0.000176307712632826 0.000101265869141347 0.000241324038672686 0.000937594682897547 0.000174819884544345 0.000459014776176484 0.000308802369752539 0.000234681002436694 0.000703134118567108 0.000288310918520896 8.32540444968552e-06 8.43666531466371e-05 3.85253773225943e-05 2.64453773871609e-05 0.000325908517231271 0.000702544554713472 3.50013787299538e-05 0.000462443061659927 0.000324759969574666 0.000368383662036921 2.98666279781005e-05 0.000356505829071379 3.5953983857873e-05 0.00146764273910138 0.00024417265584484 0.000106308682532053 7.15093594358199e-05 5.13142163746617e-05 5.6258529788576e-06 5.67207255855822e-05 XM_598478.7 SLC38A6 PREDICTED: Bos taurus solute carrier family 38, member 6 (SLC38A6), 0.0 2567 100.00 0.999297259311314 NM_153811.2 SLC38A6 Homo sapiens solute carrier family 38, member 6 (SLC38A6), 0.0 1943 90.35 0.997189037245257 TCONS_00014708_4 sp|Q8IZM9|S38A6_HUMAN S38A6_HUMAN Probable sodium-coupled neutral amino acid transporter 6; 0.0 790 88.82 0.99780701754386 1 noncoding 0 0 0 0 -0.689895874078838 0.00229975017931422 -0.0573631448944916 0.251436826379648 GGATGGACTGGGTAGTCGACCAGCGAGCCGCATGGAGGTCCCAGCGGGGGTCATCAACGCCGAACCCGGCTGGTTTGTCTCTACTCAGGAGCCTGAAGAGGCGGAGGCGGAAGAGTCTAGCCCGTTGCTTAGCAACGAAGTTCACACACAGAGATCCCGAGGTGCTTCATTTGGTTTCTCAGTGTTTAATTTGATGAATGCCATCATGGGAAGTGGCATCCTTGGCTTAGCTTATGTTATGGCTCATACTGGTATCCTTGGATTTAGTTTCTTGCTGCTGATAGTCGCTCTCCTGGCTTCTTACTCAGTTCATCTCCTGCTTAGCTTGTGTATTCAGACAGCTGTGACATCTTATGAGGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGGTGATGGTGGCGAGCACCATAATAATTCAGAACATTGGAGCTATGTCATCTTATCTTTTAATCATTAAAACAGAACTTCCTGCTACTATATCAGAATTTTTATCTGGAGACTACAGTGGGTCTTGGTATCTTGATGGAGACACACTACTAATAATCATTTGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCTAAAATAGGCTTTCTTGGCTACACAAGTAGTTTATCATTTTTCTTTATGGTGTTCTTTGCTCTTGTGGTAATAATTAAAAAATGGTCCATCCCTTGTCCTCTGACATTAAATTATGTAGAACAGTATTTTCAGATTTCAAGTGCTACAGATGATTGTAAACCAAAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATGCCATACCAACCATGGCCTTTTCATTTCTATGCCACACCTCAATACTGCCCATATACTGTGAACTTCAAAGCCCTTCTAAGAAAAGGATGCAGAATGTAACCAATACAGCAATTGCTCTAAGTTTTCTCATTTATTTTATATCTGCACTCTTTGGGTACCTCACTTTTTATGACAGTGTGGCGTCAGAATTACTGCAAGGTTACAGTAAATACTTGCCACATGATGTTGTCATCATGACTGTGAAGTTATGCATACTATTTTCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCAAGGAAAGCTTTAATGATGATGTTTTTTTCCAATTTTCCGTTCTCATGGATTCGCCATTCTTTGATCACTCTAGCTCTCAATATTGTCATTGTTTTACTTGCAATATATGTTCCTGACATTAGGAATGTATTTGGTATAGTTGGTTCCAGTACATCAACGTGTTTGATTTTTGTGTTCCCAGGACTGTTTTATCTTAAAATGAGCAGAGAGGATTTTCTTTCATGGAAAAAGTTGGGGGCATTTGTTTTGCTCATCTTTGGTATTTTGGTTGGTAATTTTAGTTTAGCACTCATTATTTTTAATTGGATTAATAAATGAAGAAATTATTTTCCCACTTTG EMBV3_16807 TGTGGGAGCTGGAGGATCTAATACCCCCTCAGATCATCAACACAGACTGCAGGGGCTCTG Gene GeneID:100139766|LOC100139766:XM_002695435:1_cdna Constitutive 0 NULL GeneID:100139766 18 GENE LOC100139766 NULL similar to immunoglobulin-like transcript 5 protein EMBV3_02831 GAGTTCCTGCTCCTCAAGTATGGCACCAAGGAGCCGATTTTCCAGGCTGAAATGCTGAAT Gene GeneID:785841|LOC785841:XM_002683620:13_cdna Constitutive 0 NULL GeneID:785841 4 GENE LOC785841 NULL similar to melanoma antigen family A, 10 EMBV3_20628 TTGGAAAGCTCCATCCAAGTTCCTCTCTCTGCCTTGCCCTCACACTACTGTCTTCAGTAC Gene GeneID:511108|LOC511108:NM_001101940:5_cdna Constitutive 0 NULL GeneID:511108 20 GENE LOC511108 MGC152044 MGC166419 hypothetical protein LOC511108 EMBV3_03111 TCCTCCTACTGAACCAGCTTGAAGGACTCCCCAGTCATCATGCCTTGAACTCTGAGAGCA Gene GeneID:617403|TMEM52:XM_002694183:642_cdna UTR3_Alt 3 NULL GeneID:617403 16 GENE TMEM52 NULL transmembrane protein 52 EMBV3_26354 TTCCTGTCCCCCATCTGTCTCTGCTGCATTCTGGATGATTGCTCAAGACCCATTTTTCAG Gene GeneID:616110|ZNF511:XM_002698473:515_cdna Constitutive 2 NULL GeneID:616110 26 GENE ZNF511 NULL zinc finger protein 511 EMBV3_09310 AAAGTCATGAGTGGAGACCCAATTTGTCTGGACTGGCTGAGGACGGGCGTGTACTTTCAA Gene BVV0102_385695 - 1 EMBV3_22524 GK000027.2:33024354-33042467 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07177 TATTTCTTGGACTTTTCCGGTGGTCTAGTGGCTAAGACTCTGCACTCTCAATGCAGGGGG Gene BVT0102_120909 + 1 EMBV3_43178 GK000021.2:43044976-43132860 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43004 CCTTCAATTCTGGTCCCATTAACTCCAAGTGCCTTTTTTACAGTGACGACAGACAGTCCC Gene GeneID:534850|C13H10ORF38:NM_001102180:124_cdna Constitutive 0 NULL GeneID:534850 13 GENE C13H10ORF38 MGC159848 chromosome 10 open reading frame 38 ortholog EMBV3_24016 CAGTTCCTGGAGAGCTAACAACCATGAGCCAGAGACTACCCATCACTCCCTCTCCCTCCT Gene GeneID:781763|LOC781763:XM_002689777:6_cdna Constitutive 0 NULL GeneID:781763 8 GENE LOC781763 NULL similar to Tumor necrosis factor receptor superfamily member 10A precursor (Death receptor 4) (TNF-related apoptosis-inducing ligand receptor 1) (TRAIL receptor 1) (TRAIL-R1) (CD261 antigen) EMBV3_16488 CTCAGTCAGATTGCATTGTCAGCAGTTACTGCCACACTCTTGTCAGCTTAAACACAAATG Gene GeneID:532887|PLEKHA5:XM_002687754:64_cdna Constitutive 0 NULL GeneID:532887 5 GENE PLEKHA5 NULL pleckstrin homology domain containing, family A member 5 EMBV3_27381 ACACCTGTGACCAACCTCAAGAAGCTCGCTTGCCATGGATGACCTCCCAAGACACATTGA Gene GeneID:615787|LOC615787:XM_002686496:602_cdna Constitutive 0 NULL GeneID:615787 3 GENE LOC615787 NULL similar to Cytosolic carboxypeptidase 6 (ATP/GTP-binding protein-like 4) EMBV3_19908 CAGATGGTGTCTTATGCTTCAGTATCAACCTGTTAGTTTCCAGCCCAGTGCCTGACACAG Gene BVT0102_300646 - 1 EMBV3_29929 GK000003.2:14715263-14744311 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10641 TTCCAGGCCCTGGTGGATGAAGGAGATGAGAGCCCCACCCAGAAGGGAGAACCGGATTCC Variant GeneID:528582|CCBL1:NM_001077978:145_cdna 567^653 2 EMBV3_41280 GeneID:528582 11 GENE CCBL1 MGC139706 cysteine conjugate-beta lyase, cytoplasmic EMBV3_26534 CTGGAGCATCGCCTGGGCACAGATCCACACACTGTAAGCCATCTCACCTGGGAAGAGTTT Gene BVV0102_069102 + 0 NULL GK000019.2:56167977-56171931 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26708 TAAACAAAGGAGCGGGCAAGCAGGGATCGCGGACTGGGGTGATCTCACTTGGGAGAAATT Gene GeneID:514212|MYH14:XM_002695126:631_cdna Constitutive 0 NULL GeneID:514212 18 GENE MYH14 NULL myosin, heavy chain 14, non-muscle EMBV3_11362 AGCTCCAGGCTCTGCCTCTAGAACTGTCTGCTGACTTCAGAGGTTTCCCTAGCTGCAAAA Gene GeneID:508887|SLC24A6:XM_002694518:433_cdna Constitutive 0 NULL GeneID:508887 17 GENE SLC24A6 NULL solute carrier family 24 (sodium/potassium/calcium exchanger), member 6 EMBV3_26971 CCGGGCTCGATTGGCAGTTTAGAAAAAGAGCTGCTGTATCTTGGACGAGACTATCCAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23721 GACCCTGTGTCACCTGTCTTTAGAGGTTGGGATGGCTTTATGTTCGTCCATACTCATGTC Gene GeneID:768051|ZNF22:NM_001077108:47_cdna Constitutive 0 NULL GeneID:768051 28 GENE ZNF22 MGC139023 zinc finger protein 22 (KOX 15) EMBV3_17786 GTGATGCTCATCCCAATTGCAAAGTAACAGCGATGCAGTGCTTTCTCCTGGAGTTACGAG Gene GeneID:281248|IL15:NM_174090:2_cdna Constitutive 0 NULL GeneID:281248 17 GENE IL15 NULL interleukin 15 EMBV3_19296 TTGGCACCCTCTTGCCTGCGATCCATCCTGCTGCACGCACATCCCCTAATATTCTTGAAT Gene BVT0102_064425 + 0 NULL GK000025.2:38756719-38823757 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147324 TCONS_00147325 TCONS_00147326 1 XLOC_089343 Coding TCONS_00147326 XLOC_089343 Coding Coding C25H7orf70 25:38785380-38794249 = TSS109951 2126 1 TCONS_00147326_3 198 0.142991533396049 2 0.760487144790257 0.00783710370200284 0.0092644514263933 0.00634358440691451 0.00408324404894515 0.00539732747902072 0.00115184623860533 0.00397347527281442 0.00454638410004755 0.00463379054449062 0.00581370174945334 0.00104337618051637 0.00207376117732598 0.000704498690493376 0.00449158500491646 0.0015820301079875 0.018830518062526 0.00908987422200016 0.0121757335665283 0.00641854381731847 0.00711580246344805 0.00467050356704564 0.00465972482146879 0.00848362809182277 0.0116627071919023 0.00714259482900609 0.00499192269733762 0.00277277663534252 0.00126321117022892 0.00122620777654601 0.00398742632698861 XM_001790498.2 C25H7orf70 PREDICTED: Bos taurus chromosome 25 open reading frame, human C7orf70 (C25H7orf70), partial mRNA. 0.0 2695 100.00 0.702257761053622 NM_001037163.1 FAM220A Homo sapiens family with sequence similarity 220, member A (FAM220A), mRNA. 1e-149 535 67.46 0.855126999059266 TCONS_00147326_3 sp|Q3ZN08|F220A_MOUSE F220A_MOUSE Protein FAM220A; 3e-14 69.7 30.77 0.98989898989899 1 noncoding 1 0 1 0 -1.73681477823103 0.00241818940062986 -0.180869072219355 0.0461936313293508 TGGTCTTGGGAAGCAGTTTAGCAGGTCCTCAAAAAGTTGAGTACAGGATCGCTGTATGGTTCAGTGGTTTCACTGTAGGCGCACACCGCAGAGATCTGAAGGCAGGGACGCAGGCGCTTGTGCCCCAGTGTTCCCGGCAGCACTGTGGACGATTCAGGCGTCTGTCAGCACATGAGCGGGCAGACAGACGTGTGTACCTTCAGTGGACACTTACTCAGCTTTGAAAAGGAATGAAGTTCTCACACCTGCTACGACTTGGATGGACTTAAGGGACGCCATTCAAAGAGGCGGAACATAGAAGGTTCATATTGAGATCCACTGAAGGCCTTCCGCGGACTGACAGGCGTGTCCTGGGGCTCAGGGTGTCAGAGACACAGCATGAGGGACGGACACAGGCCTCTCCGCACCCATCTCGCGGAGGAGCAGGGAGTGGGCGCCACCTCAGACAGAGCCTCGTGCAGAGAACTGTGGAGCGAGAGAAGGCAGGAGGTGAGCCCTGGCCCAGCAGATGCCGCTTCCTGGGCGAGGAGGCCTGCGGCCGATGCCTGGGGAGATCCAGGAAAGGAAGAGTCATCACTGGAAACAAAGCATGACCTGCGTGGCGCCAGCCCCTTGCTTTGCAGTGGCCTTGAAGCGCTTCCACGGTGGCAAGAAGCAGTAGGAAGAAATTCAGCCTCAGTGGCTGCGCAGAGCAACCCTGCAGGTCTGTCCTGGGCTCCTGCAGGGGAGCGGGGTGCGGGGCTGGCCCGTGGCGTCGGGGAGGCTCCGGGCATGGACTGGCCGCAGGCAGCGCCCAGGGCCACAGAGGACGGAGCCACGGCGGAGAGTCCCGGGGGTCAGGACTGCTGGGCCAGCAGAGAGGGTCGGCAAAGGGGGTTTCTGAGGATGACCCGCCCCGTGCTTTCCTGGAGAAGCTGGACTCTGCGTTGGCACCCTCTTGCCTGCGATCCATCCTGCTGCACGCACATCCCCTAATATTCTTGAATAATGAGACAAAAAGTGTTTTCCCTGGCCATCCAGAGCCCATGTTTTCAGAGCCAAGAGTAGAGTACAAGAAAATGCTTTCATGGGAAAAAAGTACCTCAGATGATCTGCAGATAACAGTGGCATCACTGGCTGCACAAGCTTTTGAATGAGCAAATCTGTTGTGCCGTGGTTAAGGTACAGGCAGAACAATAAAAGTAGTGAGACTAAGCGCTGTCCTCGAATGCGTTCTTTTGCGTTAACTCTGGACGCACACGGCGCGGCAGTGAAGCTCCGGCTTTGATTTGTGTGACCAGACAGACTTAGTCAGTGAAACTTAAACCCACAGAAAGCTGGTTGATACAGAAGGCAGTCTCTGTGCTTGAAAGACATTTAGGATTGGGAAGCCGAGTCAAGGAGGTTATTGACATTGCCTTATACAGCTGTCATCCGAGAATCGAAAGCTGTAACAGCAAGCTTTAAGTTCACCTTCAGCACCATCTGGCAGGGCCGCCGTCCCAGGCACTCTCTCTCCAGCCTGTTCTCTCACCATCTGATGAGAGTAGATATTTGTAAAAGTCAACCCTGCTGGGCTTGTTGTGAGCCAAGCCAAGTTGATGGTAAGCTGTTGTCATTTCTGCGTTTGTAGAATAATTTGAGTAAAAGCTGATACCTTTTCTCACACCCCTTTCCTTCCACTTGACATGCAATTTACATGGAGGCCCTACGGTGAAAGTTGCAATATTAACATTACCTTTACCTTTAGATAACCCTTCCTCAAACTAGGAACCTTAGCAGTGTTAACCCAAAATAAAAAATGAGCTTGAGCCTGTCTGCTGGAGCTCAGTCATAGAGGAAAAAAAAAAAGCAAGTATTTCCCCTTACGGAAGGTCTCCAGCTCCTAGGAGTTGCGATGTCTCCTGCACTAAACCTTTTTCTGCGCTGACCCCTTTTGTCGTGTGCTGGTAATTCGATGACAGGCACTGAAGAGCGGAAGTTTTTCAGGAGCCCAAAGAAGACGCCCCATTTCCGGAGTTATTGATTGCATATATCAGTTTATATTGCGTGCTAAATTACCATGCCGTGTGCTATTTTAGTGTTCTGGGGAAATGAAAAATAAAACCCGTTCTTTAGCGTAATAAATGTCTTATTTTACATGTGTA EMBV3_41573 GTCCATTGTGGTTCAGATTGGGATTGCCGATTATTTCAAAGAGCCCAGCAGTCCTGAGGC Gene GeneID:536077|FBXO41:XM_002691213:42_cdna Constitutive 0 NULL GeneID:536077 11 GENE FBXO41 NULL F-box protein 41 EMBV3_35743 GCTAAGTGATTGCCTTATGCAGGTTTCACCCAAAGAGGAGGAACTCTTTCAGTCACCCAA Gene GeneID:533444|LOC533444:XR_083725:1_cdna Constitutive 0 NULL GeneID:533444 7 PSEUDO LOC533444 NULL similar to gemin 5 EMBV3_26832 TGGTCTCATTGGGGACATACAAATGTGATGAATGTAGTGAATACTGAGAAATTTTGGCAC Gene GeneID:781914|FTSJD1:XM_002694847:770_cdna Constitutive 0 NULL GeneID:781914 18 GENE FTSJD1 NULL FtsJ methyltransferase domain containing 1 EMBV3_42188 CCATTGGAGATGGAGAGATTGTCAAGACAGGAGGGAGCAGAGATAATTGATGCGGCAAGC Gene BVT0102_020018 - 0 NULL GK000008.2:42141156-42534257 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39683 GTTATCCGTCCACACAAGTCATTTGATGAGGCATGCCAGATTTCCTGGAGAAGCTGCACA Variant GeneID:524966|STARD7:NM_001102086:71_cdna 766^850 2 EMBV3_18747 GeneID:524966 11 GENE STARD7 MGC140163 StAR-related lipid transfer (START) domain containing 7 EMBV3_16957 CTTCAAGGTCAACAAGGAGATCGTCAGTGGACTGAAGTGTCTGCATCACACCTACCGCCA Gene GeneID:613745|ARHGDIG:NM_001076286:264_cdna Constitutive 0 NULL GeneID:613745 25 GENE ARHGDIG MGC152089 Rho GDP dissociation inhibitor (GDI) gamma EMBV3_29026 TCCACAGAATGTGCATCTCAGCTGGTTGGAGAACTGCCATACGTTCAAGGGAGCTGTGCA Gene GeneID:519798|LOC519798:XM_002692239:1501_cdna Constitutive 0 NULL GeneID:519798 13 GENE LOC519798 NULL similar to Signal regulatory protein beta-1 precursor (SIRP-beta-1) (CD172b antigen) EMBV3_04812 TCATCGAGTTTTAACTGTCTCTGTGAACTTGAAGTTTACTTATGTAAAAGGCTTAGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00589 CCTGGAGAGATGAGAGCCAGGATGCATGGGAGCCTCTGCTGTGTTCAGTGTTTTAAGCTT Gene BVV0101_049227 + 1 EMBV3_11350 GK000010.2:82386495-82412751 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022651 1 XLOC_013321 NonCoding TCONS_00022651 XLOC_013321 NonCoding NonCoding - 10:82404611-82405145 - TSS16541 534 1 TCONS_00022651_1 110 0.316479400749064 1 0 0 0 0 4.66525582899507e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000174573157824502 0 0 0 0 0 0 0 0 0 0 0 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 2e-64 250 91.57 0.331460674157303 0 noncoding 0 0 0 0 -0.0107981341233313 0.934025667736878 -0.007401043877338 0.900311049231524 GAGCCTATGAAGCTTAAAACACTGAACACAGCAGAGGCTCCCATGCATCCTGGCTCTCATCTCTCCAGGCCTCCAGCCTCCCTCTCTCCCAGCAGCAGCAGAACCCAACACTCAGGAGATCCTACACATGGCAGAAGAGCCCACCATCCTGGTGCCCCAGGCAGAAACTCCAGTGATACTGGCAATACCAAGGCACCACTGACTCTAGAGGCACAAGAAGCCATAACAAGGCCTCAGGGTGACACCTCTGACAGAGGAAGTGAAGGGTATAAATTGGCAACACTCAATTCTAGCCAGAGGCAGCTCAAGCAAGAGAAACCAAAACCTTGTGCTATATAGTGCCACCTACTAGAAAACAGACTTTATTTTCTTGGGCTCCAAAATCACTGCAGATGGTGACTGAAGCCATGAAATTAAAAGACGTTTGCTCCTTGGAAGAAAAGCTATGACCAACCTAGACAGCATATTAAAAAGCAGAGACATTAATTTGCCAACAAAGGTCCATATAGTCAAAGCTATGGTTTTTTCCAGTAG TCONS_00018096 . 5' 255 TCONS_00018096 . 5' 255 EMBV3_21564 GAGCTCCTGCCGCTGCCGCAGCCTCAATCTCGCCGCCGCCTCGCCGCAGAAGTATCTCCG Variant GeneID:614292|AKIRIN2:NM_001110087:32_cdna 87^691 1 EMBV3_25315 GeneID:614292 9 GENE AKIRIN2 Akirin-2 C9H6ORF166 MGC128934 akirin 2 EMBV3_20361 GGACCTGCAGTTGGTCCACAATAAATGGAGATAGTTTTGCATGGCGCAGAGATTACAGTA Gene BVV0102_096217 + 0 NULL GK000007.2:6401789-6408551 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211632 TCONS_00211630 TCONS_00211629 TCONS_00211633 TCONS_00211631 1 XLOC_129936 Coding TCONS_00211631 XLOC_129936 Coding Coding SLC35E1 7:6384994-6403716 = TSS158978 4065 1 TCONS_00211631_3 412 0.0120541205412054 6 0.783184658939159 0.00147268845597984 0.00122509499206066 0.000901491777756205 0.000656778371925682 0.000653579940721253 0.000528156511198076 0.000430382030781222 0.000790082564979391 0.000603588641401232 0.00177107627728589 0.000460419227034844 0.000578328246670407 0.000155220465556263 0.000578594683390329 0.000150643828886096 0.00460365201803647 0.00015485328152495 0.00536732406535496 0.000694075019838592 0.000954576599854102 0.000691719841853905 0.00248945550849782 0.00120833641099545 0.00227363271139879 0.000337719100029678 0.000669703007485582 0.000438008587753662 0.000557410595519912 0.000695338935844931 0.00323654604802641 XM_002688579.3 SLC35E1 PREDICTED: Bos taurus solute carrier family 35, member E1 (SLC35E1), mRNA. 0.0 7306 100.00 0.996309963099631 NM_024881.4 SLC35E1 Homo sapiens solute carrier family 35, member E1 (SLC35E1), mRNA. 0.0 1770 84.55 0.392619926199262 TCONS_00211631_3 sp|Q96K37|S35E1_HUMAN S35E1_HUMAN Solute carrier family 35 member E1; 0.0 734 96.37 0.934466019417476 2 coding 0 0 0 0 -0.0064064005269312 0.95443528449886 0.0432944960340544 0.377241844651934 CGCTCGGGAAGGATGGCGGCGGCGGCGGCGGTGGGAGTGGGCGCGGGCGCCGGGGGTTCGGGAGCCGCCGGAGGCGGCGGCGGGGGGGCGCGCGAGGGCGCGCGGGTGGCAGCGCTGTGCCTGCTGTGGTACGCGCTGAGCGCGGGCGGCAATGTGGTCAACAAGGTGATCCTGAGCGCCTTCCCATTCCCAGTGACCGTGTCGCTGTGCCACATCCTGGCGCTGTGCGCGGGGCTCCCGCCTCTGCTCCGGGCCTGGCGCGTGCCCCCGGCGCCGCCCGTCTCGGGCCCTGGGCCGGGTCCGCATCAGTCGTCCGGCCCGCTGCTACCGCCGCGCTTCTACCCGCGCTACGTGTTGCCGCTCGCCTTCGGCAAGTACTTCGCATCAGTGTCCGCGCACGTCAGCATATGGAAGGTGCCCGTGTCCTACGCGCACACCGTCAAGGCCACCATGCCCATCTGGGTGGTCCTCCTGTCCCGGATCATCATGAAGGAGAAACAGAGCACCAAGGTGTACCTGTCCCTCATCCCCATCATCAGCGGCGTCCTGCTGGCCACCGTCACCGAGCTGTCCTTCGACATGTGGGGGCTGGTCAGCGCCCTTGCAGCCACGCTGTGCTTCTCGCTTCAGAACATTTTCTCCAAAAAGGTATTAAGAGATTCAAGGATCCACCATCTCCGGCTGCTGAACATCTTGGGCTGCCATGCCATCTTTTTTATGATCCCCACGTGGGTCCTGGTAGATCTCTCGGCTTTCCTGGTCAGCAGCGACCTGACCTATGTGTCCCAGTGGCCTTGGACGCTCCTGCTCCTGGCCGTCAGCGGCTTCTGTAACTTTGCCCAGAACGTCATCGCCTTCAGCATCCTCAACCTCATCAGCCCTCTGAGCTACTCAGTTGCCAACGCCACCAAGCGGATCATGGTCATCACAGTGTCCCTGATCATGCTGCGGAACCCCGTCACCAGCACCAATGTCCTGGGCATGCTGACGGCCATCCTCGGAGTCTTTCTGTACAACAAGACCAAGTATGACGCGAACCAGCAAGCCCGGAAGCACCTCCTCCCCGTCACGACAGGGGACCTGAGCAGTAAGGAGCACCACCGGAGCCCCCTGGAGAAGCCCCACAACGGCACGCTCTTTCCCCCGCACAGTGACTACCAGTACGGCCGCAACAACATCTTGACAGATCACTTCCAGTACGGCCGGCCGAGCTACCCAAACTCATATACTTTGAACCGATATGACGTGTAGAGCCTAGTGAGCTGGGCAGGACGTTCTTCCAGTCCTCCCCTCCATCCCCGCCCCCAGCAGCATCAGAAACTCCTGACCACCAGTGAATGTACAACCCAGCCACGGGGGGATGGTGCGGAACCAGCAGAAGACCCTGGGGTCCCTGGCCCCCAGCCCGCCCAGGGGCAGCAGGAAGCAGACCCTGCCGTGGGGACCACCCCTGAGCTCCGGTGTTTCACGCCCTTTCTTCCTGGAGCCTTGTCTTCTGAGGGCGGCATCACTCTGGAAACCTTGTCTAGGTTTTTACCTTTCTGTGTAGACTTATTTCCCCAAGTCTGTTCTTCAGAGTTCTTTTTCTGCTTTCCAGCCAGGACCCTCTCTGGAAAGGACACAGACCTCAGAGTGGGCGAAGTGTGCTTTACAGGGAGGGTGGCAAGGAAAGGACCCTAGGGTGGTGCTTTGTGACTGGCCACTTTCTCAGGCAGGCACAGGACTGAAGCAGGTGTGGAGCAGAGGAGTGCAAGGGTTACGAAAACCTCTCCAGCCACAAAGGTAGACTCAGCTTTGGGTCAGCCCCATGACGGTTTGCAATTCTGGCCAACGTCCCTCAATGCAGAGCAATTGCAATTAGCACTGAATCCTTACAGCCTAATTCTCTGACCTGCAAGTCAGAGATGGTGTGCCGACCGAAAGGGAAGGGCTGCTGCTGACTCCTGACTCTCTTCCTTTGCTGGAGTGGAACGACCCTCCTCTCGGAGCAGCGAGAAGGATCGTTCGAAATCATGTTCAGCGTTTCAAGCTCAACCACAATACTCAATTTGTTCTCATGAGCCTTCAACACTCTGTGCTTAACAGGGTGTCTGGTGAGATGTTGGTTTTATGAGGATCTTGCATTTTTTCTAGGGCATATTTTGTAGTTGTCTGTGTTTTTTTCGCCTCGGTCCCCCACCCCTCACCCCCCTCTTAGGGGATGCAGGATGCATGCAGATTGGCTTATGGTTGGAAACCCCTTTGGTTTTTAAACGTTTAAAAACAAGAAAGGTTGCTGGCGATGCCTGTCTCAGCACATGTCTGCATTTAGTAGGAAGGAATGAAGTGTTCTGAAGCGCTTTTCTAGTGACCACAACCTCTGAAAGTGAGATTAATCAAGAAGGTCATCTCCATACTTTTGTGTCACAGAGCTTGGCGCTCTGATTCTGTTAGCTGCTCTAGCGATGTTTCCGTCAGGATATGAATCATGTCCCAGGGAAGGGGCAAGCACCAGGCTAGGATTTGGTTTGCCAAATCGGTCTTTGGTCAAGAAGTTTGCGTTTTAGCAGAATCACATCACCAGGAAGATTATGTGAGCTCCGAGGGTAACCCGTGTGCTGAGGTCCAGGTTGGGACACTGGCATAAGAGATTGTGGCCTCAGAGAGGACCCTCCCTTGACTGCTGGCTGCCTTCTTCCTTCTGCCCTGCACCTAGCCTCTTCAACAGGCACTTGGCTTGATCAGCAGATGGGACCTCGGGTCACCTTTTACCTTCTGGCATGTGAGATGGTTCTCTGCTCCGAGAGGAAGTGCCAACCATTGCTTATGCTCGACTCCTGTTTGTTTTTGATGATGGGAACTTTGTACCTAGAGGTTACATTTTGTCACTCCTGGATGGGCCGCTCCTGGAGAGGTCATGAGGTCGCCTTCTGGCTTGTTTAGTACCACTGGCCTCAGGAGAACCCATTTGGCGTTGGCTTGCTTTTTCCTTACTTTGGCCTCAAGTTCTGAGACTACGTTGTGCGAAACAGGAAGGGGCCGTCCTCAAGGATGTTTTCGTGAACTTGCCGAGTGCCTTCAGCAGGGGCAGGAGTTGGACCTGCAGTTGGTCCACAATAAATGGAGATAGTTTTGCATGGCACAGAGATTACAGTAATTGTCTTTATGATAGGAACTGATTCCTTGAACATAAAATTGAACTCCAAAATGAATTATGCTTCTCTGCAGGTTTAATGAAATTTCTGAGGTTGCTGGAATTTGTGTATTTGTTTTTCTAAAGCAAGATCTGCTGGTGAGGGGAGATACCTGACTGGTTTCTTTACGGTTTATAAATGAATAAACAAATATTTAGTTCTGTACATAAATCTACAGTGAGTACATACACTGGAATGAGACAATCATATTCGATCAGATCAGAAGACAAAGACATACTTTTGAGACTTGAAAGTTCAGAGCGGACGTTGACCTCCTGAAGGTTGGTTTTCCAGCCACTTGCTGCCCTGGCTCAGCCCCCACTACTCCTCCTCTCACATCCACATTTGCAGTTGGGTTGCTTCACCCTCCTCCCTGCTGGGGTTTGTAACAGCAAATTTAGTTCACCCATCCACGGTGTGGTCTGCAAAACTAATTCAAACCCAACCCCTTCATTTTACAGAAGGGGAAACTGAGGCTCAGAGGGCATTTTTAAATAGTGTTTGTTCACTATCTTGAGACTCAGTGTAGAATTTTTAAGCACCTTATTTTAAGTCATTCATTATTTGGAAAAATCAAACCCCTATTACAAAGGAGAGAAGTCAAACAGGTTCAAATGAAGAAGCACCTGGAATTTCTGAACTCTGCTGTGTATGTAGCACGCATCGCACAGCAGGTCCTGTGTTATCACTGGGACATAACCAGACCTGGATCCCTTAAGGTCTAACAGCCTTAAGGCAGAGAACATTATTGAAGAATCTGAAAATCGTGAACTCTTTATGTCACCGTGTTTTCAGGACTTTTCATGCTATAGACTGTTCTGCAGGAATGATACTGTGTATATTCTTGGATGGCATTTACCAAAAATAAATGATGGTCTCCAGGGAATTAAGA EMBV3_34228 ATAGCCGACCTACAGCTGATAGACTTTGAGGATTTACTAACCAGACATAAAGTGTTGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03061 TGACTGCATCGTCTGCTACTCGGCCTATGACCTCGCCGGGCACCTGCCCCGCCGCCTCTA Gene GeneID:100336542|LOC100336542:XM_002691699:44_cdna Constitutive 0 NULL GeneID:100336542 11 GENE LOC100336542 NULL hypothetical protein LOC100336542 EMBV3_02950 TGGAATCAAGCCAGGAGCAGTGTTTCCCACGCCAGTTACAGTTCATTATCTATCAGCAAA Gene BVV0101_064359 + 1 EMBV3_25706 GK000020.2:56022294-56295178 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13762 GCCTGCCCGCCGCCATGGCCCTGCTCCGAGAGTTCTTCAGATGCTATATACTTGGCAAGA Variant GeneID:522006|ACAA2:NM_001035342:119_cdna 65^231 2 EMBV3_19644 GeneID:522006 24 GENE ACAA2 MGC127380 acetyl-Coenzyme A acyltransferase 2 EMBV3_43698 TCTTCCTGCTTCCTCAAACCACAAAGAAGTACAATTTTAAAGCCTCAAAAGTGCATTGCC Gene GeneID:100298177|LOC100298177:XM_002696226:43_cdna Constitutive 0 NULL GeneID:100298177 19 GENE LOC100298177 NULL similar to arylsulfatase A EMBV3_24842 GTCCGGCAGCTCCAACAACAGCTCTCTAACACCCAGCCACAGCCCAGTACCAACATATTT Gene GeneID:520974|MED12:XM_002700024:107_cdna Constitutive 0 NULL GeneID:520974 X GENE MED12 NULL mediator complex subunit 12 EMBV3_19249 AGTGAGGGAGTGGTAATTGCCTCCAGGACCATAGATTGCAACCGCTTCCTGATTGATTCA Gene BVT0102_178898 - 1 EMBV3_01322 GK000007.2:57035181-57200806 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217241 TCONS_00217240 1 XLOC_131467 NonCoding TCONS_00217240 XLOC_131467 NonCoding NonCoding - 7:57101385-57143294 - TSS161832 888 2 TCONS_00217240_1 45 0.676801801801802 3 0.978882313639401 0.000508607433658677 0.000488441905386164 0.000764474737768376 0.00179548497875136 0.0019726011067523 0.000323264323834448 0.00139507336539109 0.000631725457981732 0.00259448084320748 0.00118152656455334 0.00019365174897634 0.00105094238088597 0.000224023843060858 0.00122632019432375 3.31283784676383e-05 0 0 0 0.00250852645447561 0.000954053127415289 0.0033810095950638 0 0 0 0.00262264260626708 0.00359933115071367 0.0011150631416559 7.51572142052575e-55 1.09038341132155e-05 0 XR_231742.1 LOC101906285 PREDICTED: Bos taurus uncharacterized LOC101906285 (LOC101906285), 0.0 699 100.00 0.434684684684685 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 3e-13 80.6 69.84 0.207207207207207 0 noncoding CAATTCCTGCCCAGAACCTGCTGTATCTCAGAACCAGCCATGGCATCAAAGCTTCCTCCTCACATCTCTGTCTCTTCTGGTCTTCAGGGCTCCTGTAATCACATTGGGCCCATCTGATAATACAGAAGTGTCTCCCTATGCTGGGCGTGGAGAAGGAGCAGCTTGGAATGGCAGCGGACAGCCAGAACAGATGGACAGCAGCTGAATCAATCAAGAAGCGATTGCAATCTATGGTCCTGGAGGCAATTACCACTCCCTCACTGAGAAGTCAATGAAAAGGATACATCAAAGAGTTATTAACACACTCATAAATTTGTAAAGCATCTCCTAACGACACCACTATAACTATCCCCATGTATAATGGCTTCATAATTTTATTTGTTGAAGTATAATGTACACAAGTGAAATGTTTATATCTTAGGTGTGCTGTCCAATCAGTTTTGATAAATGCATATACTTTTGCAGACTATGCCCCTATCAAGACACAGAGCATTTCCTTCAAACCCAGAAAGTTACTTGTGTCCCTACCCAGGCAATGCCCCTCTCAGAAACAACAACTAATCCTGTTATTTGTCACTATATTCCAAAGTTTCATATAAATTGAATCCTGTAGTTTGTCATCTTTTGCATCTTGCTTTTTTATTTAGCATAATATTTTCTGAGAATGACTCATATTATTTCAAGTACCAGTAGCTGATCCCTTTTTATTGCAAAGTAAGATTCCATTATAAGAAAATACACAGTTTAATAATCCATTCTTCTATTGATGGACATCTGGGATGCTTACAGGTTGGAATTGTTATGAAAAGAAGATTCTATGAACAATTTTATTTTCCTTTTTGGTGTAACTATGTTTTTGTTTCTCTTGAATAAATATCTTGGAGTAGA TCONS_00217242 TCONS_00217243 TCONS_00217244 TCONS_00217245 s 3' 95856 TCONS_00217242 TCONS_00217243 TCONS_00217244 TCONS_00217245 s 3' 54602 EMBV3_30677 GGAGAGGATCTAGTGAATCATAATGAAGAGGAGGAGAAGGATGCCTCTGGAGAGTCTGAT Gene GeneID:100298428|LOC100298428:XM_002692026:54_cdna Constitutive 0 NULL GeneID:100298428 13 GENE LOC100298428 NULL similar to XAGE-3 protein EMBV3_03965 GAAGGAACCTAAGTGAGCTATATTATGGGTGTGCTGTCTTTGCTCACACATTTGGGTAGC Gene GeneID:615728|SYPL1:NM_001110088:15_cdna UTR3_Alt 3 NULL GeneID:615728 4 GENE SYPL1 MGC137623 synaptophysin-like 1 EMBV3_08673 TTGGACACGTACTTAGGGGAAAACGAGTGGCTTATTGGTGACTCTGTAACTTGGGCAGAC Gene GeneID:100139892|HPGDS:XM_002688135:19_cdna Constitutive 0 NULL GeneID:100139892 6 GENE HPGDS NULL hematopoietic prostaglandin D synthase EMBV3_21045 AGAGTGTTCTCCCACAACAATGTGTTCTCCTTTGAGGATGTGCTGGGCATGGCGTCTGTG Gene GeneID:617324|CIB4:NM_001076455:243_cdna Constitutive 0 NULL GeneID:617324 11 GENE CIB4 MGC133617 calcium and integrin binding family member 4 EMBV3_41474 CCTCCGCGGCTATCTACGAGTCTTGTTCAGGGCAAATGATGTGAGGGTTGGCACATTAGT Gene GeneID:281742|NDUFA12:NM_174306:7_cdna Constitutive 0 NULL GeneID:281742 5 GENE NDUFA12 DAP13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 EMBV3_01772 GGGTGCGGAAAGGGGTTGAAACTGAAAGCTCTGAGGTATTTCGCTCTGCTACTCAGACCA Gene GeneID:518134|EMR4P:XM_002688899:168_cdna Constitutive 0 NULL GeneID:518134 7 GENE EMR4P EMR4 similar to EMR4 EMBV3_23396 CGCACATCCACGTGGACGGCGCCCCGGGAGAAGCATCGGCTGCGCCTGGTGGCCACTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10144 GTTGACAGGCATTGGCAACCATTCATAAAGTCCTGTGCATTGACTCCCAGATGCGAGCTG Gene GeneID:100124430|ARHGAP4:NM_001102540:2_cdna Constitutive 0 NULL GeneID:100124430 X GENE ARHGAP4 MGC152590 Rho GTPase activating protein 4 EMBV3_37683 GGAAACAACAGAGGACACTGCAGAAGACACAGAGCAAGATGAAGAGGAAGAGATGGACGC Gene GeneID:282646|HSP90B1:NM_174700:920_cdna Constitutive 1 NULL GeneID:282646 5 GENE HSP90B1 MGC128904 TRA1 tumor rejection antigen (gp96) 1 EMBV3_15868 GCCTATCCTTCTTTGACCTGAGTGAACTTGGCATAGGAAAATCTGGGTATTGCAGGTACC Gene GeneID:100139986|ANO3:XM_002693509:213_cdna Constitutive 0 NULL GeneID:100139986 15 GENE ANO3 NULL anoctamin 3 EMBV3_36011 ACATGGAGGCCTTAAGCACATCCCCCTCACGAATGCCCCATCTGGACACACAGGAGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05644 CTGATTTGTAGATTCTCAGGAGCAGTTTCCTAGCACTGGAAGGGTCGGCTCAAATAGGAG Gene GeneID:613695|C9H6ORF203:NM_001102267:62_cdna UTR3_Alt 3 NULL GeneID:613695 9 GENE C9H6ORF203 MGC151851 chromosome 6 open reading frame 203 ortholog EMBV3_04096 AGAAGAAAGCATGGCAGCGAGGATGCCCATCACAGAAACGAAAGCCTACCAGAGGCTGAA Gene GeneID:513688|PLK1S1:NM_001163458:43_cdna Constitutive 0 NULL GeneID:513688 13 GENE PLK1S1 C13H20orf19 KIZ NCRNA00153 polo-like kinase 1 substrate 1 EMBV3_28231 AGGTCACCAAGGTTGACTTTGAGTTCCATCACCCGGTCAGACTCTTCTGGCCTAAATCCT Gene GeneID:100137821|RIPPLY1:XM_002699880:113_cdna Constitutive 0 NULL GeneID:100137821 X GENE RIPPLY1 NULL ripply1 homolog (zebrafish) EMBV3_17366 AGGCGTTGGAGGCATTAAAAGGATGGAGGTTCGTTGGGGAGAAAAGGGCTCCACAGAAGA Gene GeneID:616010|ANTXR1:XM_002691440:128_cdna Constitutive 0 NULL GeneID:616010 11 GENE ANTXR1 NULL anthrax toxin receptor 1 EMBV3_10490 CCGGGGGCCCGGGCCCCGGCCTGGCGGCAGCTCAAGAGCTTTGACCAGTTCACCTGCAAC Variant GeneID:528646|ABCD4:NM_001015636:139_cdna 115^361 4 EMBV3_18731 GeneID:528646 10 GENE ABCD4 NULL ATP-binding cassette, sub-family D (ALD), member 4 EMBV3_29452 GCTTTCTGAGTATAACATCCTGAATAACAAGGACAAGCTCCTTCAGGCCTTGCGACTGGC Gene GeneID:526364|PLA2G4E:XM_002690826:96_cdna Constitutive 0 NULL GeneID:526364 10 GENE PLA2G4E NULL phospholipase A2, group IVE EMBV3_23191 AAACAACCTCATGCTGCTTCGGAGGGAAGGATTACTCTGAAATGTACGTGACCTGTGCCC Gene GeneID:280910|RGN:NM_173957:2_cdna Constitutive 0 NULL GeneID:280910 X GENE RGN NULL regucalcin (senescence marker protein-30) EMBV3_25566 TTCCAGATTGGCCCTGACTTCAGCTGTACCTCGTTGTCCGGTGGTTTTATCTGAGTTTGC Gene BVV0102_199465 + 0 NULL GK000009.2:33668761-33690644 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236958 TCONS_00236961 TCONS_00236959 TCONS_00236957 TCONS_00236960 TCONS_00236962 1 XLOC_144620 Coding TCONS_00236957 XLOC_144620 Coding Coding DCBLD1 9:33688232-33761883 j TSS177269 4492 1 TCONS_00236957_4 658 0.0928317008014247 15 0.939212491513917 0.000670800320333681 0.000385508935683079 0.000515990003539635 0.000109374313578526 0.000523603203913696 0.000517907797736405 0.00018987362567137 0.000523734234821071 0.000927692816355789 2.53980735905922e-05 9.59250301968043e-06 5.97133214666412e-13 7.38725363009214e-05 6.91068427257853e-05 1.53862326563262e-05 0.016830526080062 0.00246184891340742 0.0102020471506233 0.000611324316844965 0.000603369097583017 0.000170452533749675 0.00314359611412941 0.00299895225027069 0.00542413108478528 0.00158694966807599 0.000517657768326301 0.000748881950174414 0.000327564828394637 0.000127770317121272 0.000107064272554925 XM_005193541.1 DCBLD1 PREDICTED: Bos taurus discoidin, CUB and LCCL domain containing 1 (DCBLD1), transcript variant X2, mRNA. 0.0 6433 100.00 0.793855743544078 XM_005266941.1 DCBLD1 PREDICTED: Homo sapiens discoidin, CUB and LCCL domain containing 1 (DCBLD1), transcript variant X1, mRNA. 0.0 2792 82.93 0.608192341941229 TCONS_00236957_4 sp|Q8N8Z6|DCBD1_HUMAN DCBD1_HUMAN Discoidin, CUB and LCCL domain-containing protein 1; 0.0 1108 81.86 0.998480243161094 3 coding 0 0 0 0 -0.0499021761745517 0.671843629110938 0.0180361020554782 0.709982928100708 GAATCAGAACATCCAATGGGTGGGGCCTGGGAAGATGCGATTCTAAAAAGTTCCCACAGGTGACGGCTGTGGGCACATAGTGACCTATAAGGACAGTGGCACCATGACATCTAAGAATTATCCATGGACATACCCCAATCACACTGTTTGTGAAAAGACAATCACAGTACCGAAGGGGAAGAGGTTGATTCTGAGGTTGGGAGATTTGGATATTGAATCCCAGACCTGTGCCTCTGACTACCTTCTCTTCACTAGCTCTTCTGATCAATATGGTCCGTATTGTGGAAGCATGACTATGCCCAAAGAGCTTTTGCTGAACACCAATGAAGTAACTGTGCGCTTTGAGAGTGGATCCCACACTTCTGGGCGAGGTTTTTTGCTAACCTATGCCAGCAGTGACCATCCAGATTTAATAACGTGTTTGGATCGAGCTAACCATTATTTGAAGACAGAATACAGCAAGTTCTGCCCAGCTGGTTGTAGAGACGTACCAGGAGATATTTCTGGGAATGTGGTGGATGGCTATAGAGATACCTCTTTATTGTGCAAAGCCGCCATCCATGCAGGAGTGATCGCAGATGAAGTGGGTGGTCAGATCAGCGTGTTTCTGCGCAAAGGGCTAAGTCGATATGAAGGAATCCTGGCCAATGGTGTTCTCTCAAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAATGGCTGCAGTGGATCCTTGAGTTTGGAACCTGACAGGCAAATCAGAGCTTCTTCTTCTTGGGAGTGGATCAATGAGACTGGAGATCAGGTCCGCTGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCGTCGTGGGCTTCAGGGGACAGGAGCAAGAATCACAAACAGAGAGAGTGGCTGAGAATAGATTTGGGAGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCCACACAGTCAGATTTCGACTTCTATGTAAAGAGTTTTGTAATGAACTTCAGAAACAACAACTCCAAGTGGAAAACCTATAAAGGAATTGTGAATAATGAAGAAAAGGTGTTTCAGGGCAACTCTAATTTTCGGGACCCTGTGCGGAACAATTTCATCCCTCCCATTGTGGCCAGATACGTGCGCGTCATCCCGCAGACATGGCACCAGCGGATAGCCTTGAAAGTGGAGCTCCTTGGTTGCCAGGTTGCACCAAGCAGGACGCAAGGTAATGACTCACTGGTGTGGCACAAAACAAGTGTGAATACTGTTGGTTCAACGAAAGGAGAAGATAAGACAATCTCAAAACCCATCCCCTCTGAAGAAATGCCCAAAGGATTAAACATCACAACTATTGTTATTCTACTGGTGCTCTTCTTCGTGCTGGCTGCTGGAGTGGCAATCTTTGCAGTCCTTAGAAAGAAGAAGAAGAAAGGAAATCCTTATGGATCATCTAAGACTCAGAAAACAGACTGTTGGAAGCAGATCAAGTATCCCTTTGCCAGGCATCAGTCAGCTGAGTTTACCATCAGCTACAATAATGAAAAGGAGATGACACAAAAGTTGGATCTCATCACCAGTGATATAGCAGATTACCAGCAGCCTCTCATGATTGGCACCGAGACGGTCACCAGGAAGGGCTCCACCTTCCGGCCGATGGACACCGAGGCGGACGCGGCGGGGCCGGGTACCGAGGCCGGCGGCCACTACGACTGCCCCCTGCCGGCCGGCCGCCACGAGTATGCGCTGCCCTTGACCAATCCCGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACCTGGCCCGCGCGCACACCTTCTCGGCGCGGAGCGGCTACCGCGTCCCGGGGCCCCGGCCGGCGCACAAGCACTCCCTCTCCTCTGGTGCCTTCTCCCCAGCTGCCGGCTACCAGCGGCCGCCGAGCCCCGCGCCGGCGGAGCCGGGCTACGACCAGCCCAAGGGCGGCGGCTTAGCCGCAGGGTGCGCCCCTCCCGACCATCCGAAGCCCCAGGTCAGCCCCGCGAGCAGTGCTGCCTACTTGGCCCCCCGAGACTGCCTCAGACCCCTCAACCCGACGGCCATGACCGCTCTTCTGTGAACACACACACTGTGAACCAAACTGCTGCTGCGGTACTGAGCGCCAGGCTGCGCGCCGCCCTGGAAGCCGATGCGCTCGGGAGAGTGTGCGTGTGAGTGTGGTGTGTGCGCGTGCGTGTGTGCGCAGTGGACCAGGATCCTGCGGGGAGCGCCCCCTCCACACTGTTTACAGAATTGTGCAGCTGGTTTTGTTTTGACCCTGAGGGCCAGTGTCTGTTGGGTTTTGTGGGCTCGAAAAATGAACATTTTCGGATGGCGTTTTCATTTCTCTAACTGTGATACTGAGCTGCTTCGATGTAAAAATGTGCAATCTGTACAGAGTTGTATTTAACAAGAATTAAAGTAACTTAAGTTTGCTTTAGCAGATTTTCGTTCTGCAGGGAGGTTAAGTGGGAGAATGCAGCTGTTGCAAAAACATATAATAGTTATGTTCACTTTTTAAATATATTTTATCTGATACCGTGTTAGCAGCAGGTCTGTTTAAACTTAATCTTGTTGTTATTATGGCTCATTTCCTTTCCTTTGATATGGAAAACTGAAAGCATTGTTAACATTCTTCTCCTGGAAGGAATGAAATTACTTGAAACAAGAAAAGCACACCAGGGTGGTTGTTTGCAATTACTATCAGTAGGTTAAAAAGAACAAACAAAATACAGGCACCTCGGCAGCTGCCGATTCCTTAGGCCCCACTTCAGGTGGGCATGCGCAGTGGCCTGTCAAGGGGTGCAAGGACCAGGTCTCTGTGGCCTGCAGGGGACCTCCCTTCCCTCAGCCTGCAGGACTTGGCCCTCTGAGCAGCTGGCCTTCCTGACACGTAGCTTCTTGTTCACCTCGGGCCTGGCAGATAACTCGCTTTCACATGCAAATCTGCCTTTTCAAACTGTCTGCAAAGCCAAATGCCCAGACTTAGAGCAACCAAAACTGCTCTCTCAACAGACAGAGTGAAGGTGGCACAGCAATTACGCTCTAAATTACTGTGTCAGATGCTTTTGTACCTCAGATGAAAAATATTGCTGAGGTCAGACGCCCACACTTTTCATGACTCTCGGAAACAGCACATTGTACTATTTGAAACACAAAAAAGTTATTTGAAGTGTGTTCTTGTTAAAGTGACTGAAGGCAAATCTACATAGGGCTTTTTCTACTGAGATGGCTGGAAAGCGCTAATTTTGTAAGAAAAAATTTTCCCTTAAGTAGGTTCTATAATTCCAGATTGGCCCTGACTTCAGCTGTACCTCGTTGTCCGGTGGTTTTATCTGAGTTTGCTTTGTAAGTTCACTGTGGGCGGGGGACGGGGGCAGGGTGCGAATTTAACCTCTTTTGTCAAAGAGGAAAGTGTATGTTTTTGTTTTAATGGAAAATGTGGACCAAAAAATTCTTTCCCTAAAAATGTATAATACTAGTTGTATGACACTTTCTGTGATTCTGAGGTGCTGGAAGGTCACAGCAGACTATCTGTGGTTACTATGGAGGACAAACCATTTACCTTGTGAGTTTACATGGTTTTCTACGCATACTAATTGTAATAAACTATGCCAAACCAATGTACAGACCCGTCTCTCATTGGTATCCTGCTTGCTGGCCTATTGAAGGCACTGGAGGCTCAGCCTCCAGACAAGGGCAAGCGGTACAATGGGAAGAGCAGACGTGGCTTCCTCTGGTTGGTCCTAAGTTGGAAATAGGGACAGAAATGAGGGAAGCTGTCAGTTATTAATAAAGTCCTAGCGCTCTGGGGTCAGTTTCAGGCATTTTAATTTGGCTTCCTTCATTGTTTCCAGAAGTAGTGGTCCAACTTCCTACAAGCCTGACTTACAGCAGGCTGGCCTCTCTACTGGCTACTATGGATAATGAGTTGGTTTCCTACGCTTATTGCTGTAGGCAGCCAGCCAGAGTTCTGTTTTATTTATGGTCTGCCCATGACCCATCTGTATATCCAGTTTGTCATTGCCTAACCCTGAGCCTCAGTTTCCTCATGCATAAAAACGATATGAGTGTGCCTTCCTCCAAGGCTCACAGATAAGAACTGTGACATTTGGGCTACATGTATTTTTAACATTAAAATACTAGTCAAAAAACCCCACACTTCTCTATGGTGGGGCAGTGTCCATCTATCCCATTTCTTTCCCGTATATATGATCCAATCATGACAGAAAGAGCAAGGACAGGACTTTGTTTTGGAACACCACTTCCTCAGGATGGCCTCACTGCGTAGCCCAGGATGGTCAGTGGAAAAGTCTGTCTGATACACCCAGCACAGCCAAGCCTAAACTACAGGATAAGGGCAGGAAAATACTATGCTTTTCTTTTCCGTTTTGCAAAATTAGCACCTATGATAAGGCAACTGTCTGTTTTTTTTTCTATGTTATCAAATCCTACTGGGAGGCAAAGATTGCAGTCTGTCACTTCTTACAAT EMBV3_40886 AAGTGGTCCTTTAGGTAGGGTACTCTCTGATTGAATGGGACCAGTGTTGACTCAGTAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10288 ACCTGGTCCGGCAGCATTTCTATGAAGTATCCCTGGAGTATGTCTTCAAGGTGCAGGAAG Gene GeneID:100337291|LOC100337291:XM_002689266:10_cdna Constitutive 0 NULL GeneID:100337291 7 GENE LOC100337291 NULL GTPase regulator associated with the focal adhesion kinase pp125-like EMBV3_39936 CATGGGCCACGAGTATTCTCACCAAGAAAATGCTAAGCGACTGGAGACCCCAAAGGAGCT Gene GeneID:535967|ATP10A:XM_002689359:35_cdna Constitutive 0 NULL GeneID:535967 7 GENE ATP10A NULL ATPase, class V, type 10A EMBV3_03785 TGGGCTTAGTCTAGCTCATGTGTTCCCCAACTAGTAAGGTTTTCTGGAACCATGTGGCTC Gene BVV0101_075421 + 1 EMBV3_14942 GK000007.2:105360592-105587468 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04184 CAAGAAGTCCACCACGAATTCTGACCAAAGGCACTCTAGAAGCTCTACATCTCCGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32654 CTTCCTCATCATTCGATACTTCTTTGAGCTGCAGATGTGGAGCTTCTGTCACGGCAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10629 CAGCCGATGTTTCACAGTGCAGAGAGGAAATGAGGACATTTGAGAACTTTCGCCAAGGCC Gene BVT0102_059595 + 0 NULL GK000002.2:60616791-61582124 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105393 TCONS_00105388 TCONS_00105389 TCONS_00105391 TCONS_00105390 TCONS_00105387 TCONS_00105392 1 XLOC_062559 NonCoding TCONS_00105392 XLOC_062559 NonCoding NonCoding - 2:61043620-61073153 - TSS77784 506 3 0.982967628335365 0.00545038474514897 0.00151249433345585 0.0020935386259053 2.14047112083051e-05 0.00160249358829106 1.6779118221729e-07 0.000335927820774444 0.000397430625827506 0.000250564028095102 0 0 0 0.000300536351050969 0.00139446787235415 0 0 0 0 0.0038069482680535 0.00235314283616632 1.25947436813151e-27 0 0 0 0.00382266876423949 0.00284943923812573 0.00203167435547279 0 0 0 0 noncoding GTAGAGAGCAGTGTGCATGTAATGACCCTTGACCCTGCGTCTATTACTGACACCAGTCTGTGAGCCCAACGCATCCAGCCAGCATCTCCTCAGGCCCACTGTGGGGGACACAGCCGATGTTTCACAGTGCAGAGAGGAAATGAGGACATTTGAGAACTTTCACCAAGGCCAAGAGAAAGGATAAGGTAAACCTCATTCCATAACTCAAATTGAAGGCAGCCCACAGTAGAGGATCTACTCCTGCTTCTGATTTTCTCTGGCCTCTCAAGAAAGTGGGCTCATTACTCTAAACTGTGCAACAGGTTGTTTCTGCATCTTGCCCATCGTAGTCACACAGGACCTAGGCTGACAGAAGGATGTAGGTCTTTGAACCCGCGAGTCTGGGCTGCAGGGGAATGATTTTCCAGATACTCAGCCTCCATCTGGCCTTGTTCTTAAAACTGGTCTGCTTGAGAACTCACCCCTCCCTTTTATAAGAACCTTTGTCCCCTCTTCAAAATAAACCA TCONS_00105381 s 5' 272644 TCONS_00105381 s 5' 272847 EMBV3_39859 ACCCAGTATTTCCATAGGTTTAAATTTTGGGGATGAGAAAGGAGGCATCATGCTCCCCTG Gene GeneID:514465|SMAP2:NM_001075670:167_cdna Constitutive 2 NULL GeneID:514465 3 GENE SMAP2 MGC143386 SMAP1L small ArfGAP2 EMBV3_12901 CCCTGGGAGGATGCCCACATTCCGAGAAGAACAGATGATTCCTGTATCGCAAGAGTTTTG Gene GeneID:282303|PECAM1:NM_174571:27_cdna Constitutive 0 NULL GeneID:282303 19 GENE PECAM1 MGC140603 platelet/endothelial cell adhesion molecule EMBV3_09386 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19506 AGGAGCCCTGATCCTCTGTTGTCCATTTTCGTCACCCAGATGTTTTCCACTGAAGCATGC Gene GeneID:780878|PHYHIPL:NM_001079798:16_cdna Constitutive 0 NULL GeneID:780878 28 GENE PHYHIPL MGC134205 phytanoyl-CoA 2-hydroxylase interacting protein-like EMBV3_33174 TACAGCCCTGCTGGGGGAATAAGCCTCAACATCAAGTGGCTGGAGGGCATGTTTTATGCA Gene GeneID:515802|LOC515802:XM_002691101:2_cdna Constitutive 0 NULL GeneID:515802 10 GENE LOC515802 NULL hypothetical LOC515802 EMBV3_20518 ACGGAGACTCATTCCACTACCACACCCTGGAGGAGGCCAAAGAGTACATCAGACAACACA Gene GeneID:508648|LOC508648:XM_002688580:287_cdna Constitutive 0 NULL GeneID:508648 7 GENE LOC508648 NULL hypothetical LOC508648 EMBV3_22823 CGTTCTATCAAGCAACTGGTACTTTGATGAGGAAACCTTTGAGGCCGTGTCAGACGAGGC Gene GeneID:533378|MYLK2:NM_001083719:1192_cdna Constitutive 0 NULL GeneID:533378 13 GENE MYLK2 MGC155182 myosin light chain kinase 2 EMBV3_04317 TCATCCCTAGTATTGTACTTTGTAAAAATGTGAAGTTTCTGCAGAACCTTTAGCCCCTCG Gene GeneID:782821|LOC782821:NM_001101286:19_cdna Constitutive 2 NULL GeneID:782821 25 GENE LOC782821 NULL hypothetical protein LOC782821 EMBV3_43599 GCTGCTGAGGTCTTCGTCTCCGGGCCAGCGTGGAAACTCCATGAGGCTCTGGAACATCTG Variant GeneID:538657|TRIM68:XM_002693386:18_cdna 66^547 1 EMBV3_38946 GeneID:538657 15 GENE TRIM68 NULL tripartite motif-containing 68 EMBV3_19532 CCGCGGAAAAGCCAAGGAGGAGGGCAGCTGGAAGAAATTTATCTGGAACTCGGAGAAGAA Gene GeneID:519758|ATP1B1:NM_001035334:102_cdna Constitutive 0 NULL GeneID:519758 16 GENE ATP1B1 MGC126939 ATPase, Na+/K+ transporting, beta 1 polypeptide EMBV3_10776 CGACACCATCTTGTGCCACGACACCACTCGGCCTGAGGAATTTGACCATTATGTGCACTT Gene GeneID:514653|P2RY4:XM_002700045:1_cdna Constitutive 0 NULL GeneID:514653 X GENE P2RY4 NULL pyrimidinergic receptor P2Y, G-protein coupled, 4 EMBV3_04749 CTACACTAGGATGACTGTCGATAACTGCAGGTGCTGAGCTGTTTCTCGCTCTACATCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25001 AACTGTGTGCAAAGAGGGAGCTTTTTAGACTTTAGGGGGAGAGGTATTTCATTAGGAGCC Gene GeneID:782022|LOC782022:XM_002698738:209_cdna Constitutive 0 NULL GeneID:782022 27 GENE LOC782022 NULL similar to mitochondria-associated granulocyte macrophage CSF signaling molecule EMBV3_24293 AATGAGGGTCAGACATTACAGGATCTGGATATGGGACCATGTGCTCGACCTACAGATGGC Gene BVT0102_071613 + 0 NULL GK000018.2:59093552-59123932 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08281 ATTGCTGCGGCTGCATGCACAGTCATTCTGGTGATCGTTGTGCCCATCTGCACGATGAAA Gene GeneID:541059|LOC541059:XM_002696611:114_cdna Constitutive 0 NULL GeneID:541059 21 GENE LOC541059 NULL similar to UPF0258 protein KIAA1024 EMBV3_32666 GGTATAACTTTGTTCCTGGACTCTGACTTGAAATCCCCTGGGTGAATCCTTTCTATCTGG Gene BVT0102_271374 + 1 EMBV3_28187 GK000009.2:25279439-25474383 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24749 TCAGATAAGAGTGAGAGAGCAAACCAAGTTGCCTCCTTATGTGAATTTGGAACATGTTGG Gene BVV0102_133917 + 0 NULL GK000005.2:102118595-102144409 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23479 AGTGTCAATTCAAGCTGCTGCGGATGGCTGTGGCCTTGATCTGTATGAGCATGGAGTTTG Gene GeneID:535623|RHBDL3:XM_002695658:127_cdna Constitutive 0 NULL GeneID:535623 19 GENE RHBDL3 NULL rhomboid, veinlet-like 3 (Drosophila) EMBV3_41377 TGCCTTCCCTCTTCAGCCTCTGCCTGCTTTACCTGAGTTCCAGCTACTATGCCACTATAA Gene GeneID:507535|SLC17A1:XM_002697531:276_cdna Constitutive 1 NULL GeneID:507535 23 GENE SLC17A1 NULL solute carrier family 17 (sodium phosphate), member 1 EMBV3_22471 CTTTTCCTACAGGCAATGGCATTCTTGGCAATGGTCATGGGAACCCACACCCTCTGTTTG Gene GeneID:526816|IL25:XM_002690445:305_cdna Constitutive 0 NULL GeneID:526816 10 GENE IL25 NULL interleukin 25 EMBV3_21270 TCTCTCTTTCTCAAAAGGCATTTATCAGTGGGTAGGTTAAGATACAGTGTGATCTAGGCG Gene GeneID:536490|LRP2BP:XM_002698655:109_cdna Constitutive 0 NULL GeneID:536490 27 GENE LRP2BP NULL LRP2 binding protein EMBV3_43743 TTTGGGAACACTTGGCTGAGATGTTACAACTTTGAAGCTATCAGAAAGGAAACTTCCCTC Gene GeneID:510838|TUBD1:NM_001075470:18_cdna Constitutive 0 NULL GeneID:510838 19 GENE TUBD1 MGC143408 tubulin, delta 1 EMBV3_02979 TGAACCAGAACACGACCATCGCAAACGCATGGGGCTTAAGATGCTGCTGATGATGGGCTT Gene GeneID:512500|CYC1:NM_001038090:68_cdna Constitutive 1 NULL GeneID:512500 14 GENE CYC1 MGC134266 cytochrome c-1 EMBV3_36655 GGCTGGAGTTATCTGAACACAGTGGAAAGGTGGGATCCTCAGAGTCAGCAGTGGACATTT Gene GeneID:614976|KLHL1:XM_002691882:7_cdna Constitutive 0 NULL GeneID:614976 12 GENE KLHL1 NULL kelch-like 1 (Drosophila) EMBV3_19142 CTCTTGCCCAACCTACTAACAATGGTTGAAATGCAGAATGGAACCTGTGCAGTCTATGGC Gene GeneID:404058|KLRK1:NM_001075139:5_cdna Constitutive 0 NULL GeneID:404058 5 GENE KLRK1 KLRC NKG2-D killer cell lectin-like receptor subfamily K, member 1 EMBV3_28699 GTCCTAGCGAGTGGCCTTCATGTTATAGTTTGAGAAGGCTTTGTGAGTACATACACTAGT Gene GeneID:512659|MPP7:NM_001100347:37_cdna Constitutive 1 NULL GeneID:512659 13 GENE MPP7 NULL membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) EMBV3_15415 AGTTTAAGCTGCCCTGCGCGAGCAAGAAGGTTCTGTCTTAACCAGAATCCCAGTCTGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21299 TGATTCTTGCTGTTTGGTGGGAATCTCTGGGGAAGTAGAAATGGTCCAAGGCCAGCTATA Gene GeneID:539873|ZEB2:NM_001076192:130_cdna Constitutive 0 NULL GeneID:539873 2 GENE ZEB2 NULL zinc finger E-box binding homeobox 2 EMBV3_08560 CCTGGACGATCTCTGCAGCCGATTTATTTTGCATATTCCCAGCGAGGAAAGAGACAATGC Gene GeneID:539770|DCP2:NM_001078023:36_cdna Constitutive 0 NULL GeneID:539770 10 GENE DCP2 NULL DCP2 decapping enzyme homolog (S. cerevisiae) EMBV3_24788 CATCCGACCCTGAAACAGAAAGTTACAAGGCTATGTGAGCGAGTGTTTAACAGTGGGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01035 CACCTTTGATTTTTGGCACTTTCACCCCTGATTCCTTCTACGGCAAAACCCACCTGCAGC Gene GeneID:281976|PDE6D:NM_174420:40_cdna Constitutive 0 NULL GeneID:281976 2 GENE PDE6D NULL phosphodiesterase 6D, cGMP-specific, rod, delta EMBV3_08974 ACGCGTGGTGCCTCTTGTCCAGACGGGTGAAACCGATGCAAACGTGGTCAAGTTCTTAAA Gene GeneID:617636|MMAB:NM_001079632:285_cdna Constitutive 1 NULL GeneID:617636 17 GENE MMAB ATR methylmalonic aciduria (cobalamin deficiency) cblB type EMBV3_14589 ACACCCTGAGTGGGGTCCTAAGCCGTCCGAAAACTGTACAATGGGGGAGACTTACCTTTG Gene BVV0102_429852 + 1 EMBV3_16206 GK000030.2:70346816-70399108 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21486 CAGTGAGACCATGGCAGTTCTGCAGTGAGGACCAATGAGTCCCTGGGTTCTAGATGAAGA Gene BVV0101_056550 - 1 EMBV3_05526 GK000003.2:100415214-100419920 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33042 GAGTCTCACGTTTGTACATTCACACATTTTGCCTTTCAGTTGTCTTATTTTGACCATTCT Gene BVT0101_011687 + 1 EMBV3_11194 GK000016.2:64426027-64648456 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35468 TGGCTAGGTGAATGAGTGGTTGGACGAACGAATGAATTTGCCAGTGATCAGGCCCAATCC Gene BVT0101_039432 + 0 NULL GK000019.2:39771623-39793131 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01175 ATATTAAGCGTCTCCTTGATTCCTTTGGTATCCACCGTGGCTGATCCACACGTTCCACCG Gene GeneID:513054|WHSC1L1:NM_001075595:59_cdna UTR3_Alt 2 NULL GeneID:513054 27 GENE WHSC1L1 MGC137890 Wolf-Hirschhorn syndrome candidate 1-like 1 EMBV3_11933 TAGCTCTGCTGCTAACTGGTCTTGGACACGTCACACCTCAGTTTTCTTCTACGGGCTGGA Gene BVV0102_046705 - 0 NULL GK000006.2:61411336-61796029 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38795 TGAGGCGGCCAAGATCAGAAACCTGCCCTGTTCAGAAGTTTATCAGTGAGGACCGCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23242 CCTGAGGAGGCAGCTATAGAGGAAAACCTAGCAAACAGGCTAGAATTCAGGAGCTGAGGA Gene BVV0102_266969 - 1 EMBV3_28936 GK000001.2:107688264-107774352 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31045 CATGATGCCTCTCAGCAAGATTGTGTCTCTGGGAGAAGACGACCAGGACAGGTTCAGCCA Gene GeneID:508574|KIF9:XM_002697090:190_cdna Constitutive 0 NULL GeneID:508574 22 GENE KIF9 NULL kinesin family member 9 EMBV3_41878 AATTCTGAGCTGGTTCAGCCGAAGGGAGGTAACTGACAAAGGCCAGCAGTTGCGAAAGAA Gene GeneID:783760|EIF2B5:XM_002684878:87_cdna UTR3_Alt 2 NULL GeneID:783760 1 GENE EIF2B5 NULL eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa EMBV3_35068 TGTCATACAGGGGTGTGGATGTTTTGGGTAAAGAGAGACGAGGTGAAGTACCAGAAAGAC Gene BVV0102_282838 + 0 NULL GK000014.2:17750056-17820790 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07186 GTGCATGACAGACACGTAATCAGTGCATGATATCCACGTGATCAGTGAATTATAGCCAGG Gene BVT0102_138128 + 1 EMBV3_38958 GK000017.2:188204-277494 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07396 GGAGAGAGTCCAGAGCTGACCACGTCTCGGCCCATTCCAAAGATACCATTCACTAGTACT Gene GeneID:615785|SDC2:NM_001034788:85_cdna Constitutive 0 NULL GeneID:615785 14 GENE SDC2 NULL syndecan 2 EMBV3_34978 CCCACACCATGTGCATTGAAGGCACACAGGGCCGGACGCACCAGCTACGTGTGCACTGCA Variant GeneID:525521|RPUSD1:NM_001075874:213_cdna 566^667 1 EMBV3_08242 GeneID:525521 25 GENE RPUSD1 MGC139358 RNA pseudouridylate synthase domain containing 1 EMBV3_38460 ACCATCGGACGGAGGAGCTCAGACCCCTGGTCGAATTCGCACTTCCCTCACGAGAATTGA Gene GeneID:540861|TMEM131:XM_002691141:157_cdna Constitutive 0 NULL GeneID:540861 11 GENE TMEM131 NULL transmembrane protein 131 EMBV3_41218 GAGAACTTTTCTTTGAAATGCCCCAAACATAAGAGGCTGCCGTTGTAATCCACTCCCGGC Gene GeneID:528972|RAI1:XM_002695826:200_cdna Constitutive 0 NULL GeneID:528972 19 GENE RAI1 NULL retinoic acid induced 1 EMBV3_25187 CTGCCGAGTTCTCACGCAGGAGGGACACAGGAAGAAGACAACCTTTTATGAACGTGGAAG Gene GeneID:100295849|LOC100295849:XM_002691753:279_cdna Constitutive 0 NULL GeneID:100295849 12 GENE LOC100295849 NULL hypothetical protein LOC100295849 EMBV3_24235 AAACCCAGGAACATAACGAGGAGGAAGACAGATAGAGAAGAAAAGACCTAGGGGCGGCTG Gene GeneID:520454|RAPGEF1:XM_002691648:368_cdna Constitutive 1 NULL GeneID:520454 11 GENE RAPGEF1 NULL Rap guanine nucleotide exchange factor (GEF) 1 EMBV3_13462 CTGGAGCCACTGGCCTGGAAGAGCAGAGTTGGCCTGTCTGCCATCGGCTATGCCGCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40221 GGATTACTCTCTGGGACACCTGGAATTGCCATTGCATCAAAATGAGACAGTGTTGAAAGG Gene BVV0102_175215 + 1 EMBV3_07836 GK000002.2:88908837-88915907 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102829 1 XLOC_061958 Coding TCONS_00102829 XLOC_061958 Coding Coding C2H2orf69 2:88897060-88912387 = TSS76486 4869 1 TCONS_00102829_1 390 0.0139659067570343 2 0.682435077645831 0.000224100234442543 0.000550074597015142 0.000189227728912191 8.34933276042606e-05 0.000225222960858413 8.98774873738945e-05 0.000108895136721881 7.81113316687313e-05 0.000336075020186968 0.000206188232641344 4.3062265695688e-05 4.11252908615909e-05 1.6012168527542e-05 4.97278628074771e-05 8.98168755651205e-05 0.0017173478651782 0.00111957013091063 0.001803615721359 0.000180940584968373 0.000156974172380404 0.000145925132437213 0.00072545458741127 0.000494602865702459 0.00154252645926667 0.00022338765597149 0.000169678072869809 0.000210778913294275 0.000156059238283521 0.000189761230918963 0.000184861674379329 XM_002685499.2 C2H2orf69 PREDICTED: Bos taurus chromosome 2 open reading frame, human C2orf69 (C2H2orf69), mRNA. 0.0 6237 100.00 0.710002053809817 NM_153689.5 C2orf69 Homo sapiens chromosome 2 open reading frame 69 (C2orf69), mRNA. 0.0 2122 84.12 0.394536865886219 TCONS_00102829_1 sp|Q8N8R5|CB069_HUMAN CB069_HUMAN UPF0565 protein C2orf69; 0.0 672 88.46 0.997435897435897 1 coding 0 0 0 0 -0.0658288700704657 0.663376739692111 -0.00901846465273361 0.906786714209647 AGCGCGCGGACGTCGGCTTCTGACGCAGTCGTTGCCCCTGGGCCGGCTGCCGCCCAGGCCGCTCCCGCCGACCGTTGGCGCCAGGCTGAAGTTCCTCCCTCAGGCCCACCCTCCACCCTCCGAACCGCTACGGCGGCGGCGACCCATGTGGGGGTTCAGGCTCCTGCGGTCGCCGCCGCTGCTTCTTCTGCTGCCGCAGCTCGGAATCGGAATCGCCGCGTCCAGCTCTCACGCCGGAACCATGAACCTGGGCAGCAACAGCAGCGGCGGCGCGCCCTGCTCCCCCTCGGCCGAGCGGCGCCGGCAGCAGTGCGTGCAGCTGTCCACGGTGCCGGGAGCCGACCCTCAGCGCAGCAACGAATTGCTTCTGCTGGCGGCGGCGACGGCCGGGGAGGGACCAGGACGGCGGGACCTCTCTGAGGACCCGGCGAAGGAGGAGGTGCAACCGCCGCCCCAGCATCACGTTCTCTACTTCCCCGGGGATGTGCAGAATTACCATGAAATTATGACTCGTCATCCTGAGAATTATCAGTGGGAAAACTGGAGTCTAGAAAATGTTGCCACCATCTTAGCCCATCGGTTCCCCAATAGTTATATTTGGGTGATAAAGTGTTCCCGAATGCATTTGCACAAATTCAGCTGCTATGACAATTTTGTGAAAAGCAATATGTTTGGTGCTCCAGAACACAGTACTGACTTTGGAGCTTTTAAGCACCTTTACATGTTATTAGTTAATGCTTTTAACTTAAGTCAGAAGAGTTTGCTATCAAAGAAGAATGTGAAAGATTCGAATAAGGACTCCAAAGCATCTAATTGTCGATCCACTTCTTCTCATACTACCAATGGTTGCCAGGGAGAAAAAGAGAGGACCTGTGAAAAATCTGATGAGTCTGCTGTGAGTTTTTTTCCACCATCATTAAATGGTGCTTCTTTTACTTTGATTGGATTCAGTAAAGGTTGTGTTGTTTTGAATCAGTTGCTTTTTGAATTGAAAGAAGCCAAGAAAGACAAGAACATCGATGCTTTTATCAAAAACATAAAAACAATGTACTGGTTGGATGGTGGTCATTCTGGAGGAAGCAACACTTGGATTACTTATCCGGAAGTCTTGAAAGAATTTGCACAAACAGGGATAATTGTTCACACCCATGTAACACCTTACCAAGTACATGATCCAATGAGATCTTGGATTGGAAAGGAGCACAAGAAATTTGTTCAGATACTTGGAGATTTTGGTATGCAGGTGACTAGCCAAATTCATTTTGCAAACGATGCTCCTTCCATAGAGAATCACTTCAGGGTTCATGAAGTATTTTAGACTATAATATTATTAATGTAGAAGAGCAGAAGCACTTTCAGAAAGTGTTATGAATTCAGATAATGAGGATGTAAATTCATAGATGCAGTGTCAATTTTTTTTCCTGGGCATGGGGGAAGGAAGCACACATTCCTAAAATATGGGTGTAATGTGCAATAATGTTCCTTGTTTGTAAATGTATTTAATTGGGACTGGGTTGGAATTACTTCATTTGAAATTTAAAAGGTGATTTGTGATAATCCTACAAGGAGATATAAGACGCTTAAAAATGAAAAGTTACAATACAGTCCTTATAAAAGGCAGTGAAGATTGTTATTGTTGGAAATAGTTTATTTTCTGAGTAATGTTTGAAACTAATTTTGGTGATACTTTAACAGTAAATAGCTCTTTCGGACTCAAAACTTTTGAGTGGAAATACTCTCTCTTCAAACAAAATGAAGGCACACTGATGTTTTCCATCATTTTGCAATAACTATACCCTCTTATGTTTATAAACTCATGAAGTTATTCTTCAATGTGCCATCAATTGTTTTTTCTTAAGAGTCAAAATGTATTTGTTTCCACATATCCAAGAATGTGCAGTAGTAAAGAGTTGGTTTTAAAAATATTACACTTAAGCACTGTGGCTTACTTTTTAATTGACAGCTTTTGGATAAGACATTTTGGAGTTTCTTAAAATTTGGCAACAGTTCTTTTAGAAAATTGTTTCAGATTGAACATAATTGTGTATATTGGGTAAAAATACAGATTTAAAATCATTTCATCCTATCAGTCTTTTGAAAGAGATCAGCTTAGGTAAAATGTAATCCTCTACTTTGGTACAGCTCTATTAAAAAGGAGACAGATTCTATAGATTGAAGTCACTGTTTCTCCTGCAGCATGATTTTGTCTGCCAAAAGAAAGCAGTTCTCCTTGGCCAAATGCAAAATTATATTGCTAAAAGAAAAGTTAAAAGGGAAAGTTTGAAGATACAAATGATTTTATTTTGGCTGAAAACTAAATTTGCTTAACACTGCTACATAAATTGGGTGAGGTTTCCTTCTGCCCATTTTTCTTTACCTAGATAAATATATTTTGAGAAACCAGGATCTAATAAATGTCAACCAACATTGAAACATAGCTGTGTGATTACAATAAAAAGTTAATGGTCTTTTAAAAATTGTTTATTAATAATTAGCTTTTATGGGTCGTGAAATAATTAAGCAGGGAAGTAACATGCTGTTTTCAGATTGAAAAAACAGACTGAAGCTTAATATCTTAATAAGCCAGAGGGTCTCAATATATAAAACAATAATTAAAATGTTAATTTCTTGGTTTCTTCCCAGAATTATATTTTAATAACTTGGTAAGTACATTCCAAATATTCAGACTTATAAGAAAGGATTTTTACTTAACAGATACTTAAAATTAATATCCCCTAATTCTATGAATTGCAGAATAGTATCTTTCAATGGTTTTCTAAACGGATAAAGTACAATAGTTTTATGTTGCTTTGGTTTCTTTTAAATACCTGCTGTTTCTTTTGAGACCAAAAATTCCCAGCAAGGAAACAAGTCAGTCTGATTCTAGCATTTTATTTATTACCTTGTCTTAAAACACCATTATTGATTGGATAGCTCCTTTCAATATGTTTTAATAATCCTTGGTTAAATTTATGTATATCTAATGTAAATAGCTAAGTTACTAAGTATTTTAATGCAGGAGGAAGGAAAGGCATTTCTTTTTACGAATTAACTAAAATGGAAAAGTATGACTTTCAGCAGAAGGAAGGATTCATTTAAAAATCTGAGGTATTTAAAGATCTGGTCCTTGTAGCTATCTCATCTTAACTATAATTGTTATATGTTGAATGGATATTAAGAATTACTCTCTGGGACACCTGGAATTGCCATTGCATCAAAATGAGACAGTGTTGAAAGGTAGAATTATTTTCTTGAATGAAAATATATTCAAGTTGATCTATACTCAAATATTTTAATACTTAAAAATTTGTTCTTTTTCCACATTTGTTTAAAACTGTTACAAATGTTAGTGTTTCCTTTTGGATTGTGCTTTTGTGTTTGTGTCATGAGTCAATTGAGAAAAGTAGTCAAATAATGTTAAAGTTGTTACCACCACAGCATGAATGTACAATTGTATTAAATTTAATCCACAGAAGTGTATTTGGATGTGTGCTGTATGTTAACTAGATTTGTTTATAACTTTAGATTGTTACTTAGAAAGCAGCTATTTCTCTCCACTTTGCCAGTTTGGATTTGTTAATGTTTTCATTAATGTCCCTAAGTTTTCGTACAAGCAACTTTGAAACCTTTCCTATATAAATACATCTTTCCTTTAAATTGCTCTACAAAAATTAGCATTATTTCCTTCTGTTGGATTTCCTAGAGAACAAAATCTCTCAAAAATAAGTACTTCCTTTTTTGAGCTAATCACCCAAGGTCTGTATTTCTTTAGCTGTCATCAAGGGACCTGGTTAAAATAAGGTGTGATCTGTTTTTCATTTCATTCGTGCAATATCTAAGCCCCATCGAGGGTAAAGAAGGTTTAGGCACAGGATACAGTGTAGACAAAACAGTCCCAGCATGTGAGTATGGAAATGTATAACATATTAAGATTGAAGAGTAATGTATGAAACAAAAGATACTATTCTTAAAAGAGCTATTATTCTGTTACACATCATTTAAGGGCTTTTAAGAGAAACCTGCTTTAGAGGATAAGACCTCTGTGAATCCAGGTTGCTCTTTATAAAAGCATAGAGGCCAAGGATCTCTTAGTGGTAGAGACAGCCAGAGTCACTTAGGATGCCATTTTAGTATTCCATTTAATGGAACTTGAAAAAATAGAATATAACTTCGGTGTATTTAAGACACCCAAGTAACCGTGGCCTGTATGTGTCAAAAAAGACTTAGGTAACCCCGGCAGAGACATGTATGAGTGCCAATCTGTGTTACTTCCTCCTGACTATCTGTTTTTCAGCACGGGGCAGGAGTCAGAACAGCACAGTTCCAACTCCATCTAGACGTGAATCCCTGCTTTCTGCATTTTGGGGGGTGGTCAGCTTATAAAAGATTCAACCTTGATGTCTCTTGGTAAATTTAGATCGGTGAGGAAAGCCTCATTACTAAGGTTCTTTTCAAATGTTCACATAGCTGCGGTTCAGAAGGAAGGAAAGATAGGGAAAAAGCCGTGTTGACCTATAGTTTCCCTTGTTCTGATATTTCATCAGTGACAAGTTTGAAGTTACTGAATAATTAGAATTCAGATGTAATTATGTGCCAAGACAAATACTATTGTTTGTGAAAAGATGATAATTACAATCTTCACCGGGGGCATTTTTAAATTTTATTTTGAAATAGTAATATACACCAGGGCAACAACAAAAAAATCAGATAATAGGTAACTGCAAATTTCAGTCTGCCCATCTGCTTGTATAACCTCAGAGGTGAGCACTAGTTTCCTATGTATCCTTGCACACTTGGGGCCTCCCAGGTGGCTCAGCGGTAAAGAACCTGTCTGCTAGTGCAAGAGACACAGGTTCCACCCCCGCCCCC EMBV3_31379 AAGCAATCAGGGATTTGCCTCCATTGTCATCTTCAGAGATGGAAGAATTCTTAACTCAGG Gene GeneID:518168|PLXNC1:XM_002687203:57_cdna Constitutive 0 NULL GeneID:518168 5 GENE PLXNC1 NULL plexin C1 EMBV3_38248 CAGTGCCATCGGCCTTTTTGGGGTCATCGTTGCAATCCTTCAGACCTCCAGAGTGAAGAT Gene GeneID:505684|ATP6V0B:NM_001038038:71_cdna Constitutive 0 NULL GeneID:505684 3 GENE ATP6V0B MGC134511 ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b EMBV3_23062 GCTGCTGGCTCCTGGGCTATTGGTGGTGTTGCTTCTCTGGTTCACACATCCTTGGTAATT Gene GeneID:509916|LOC509916:XM_002689710:183_cdna Constitutive 0 NULL GeneID:509916 8 GENE LOC509916 NULL similar to Olfactory receptor 2S2 (Olfactory receptor OR9-3) EMBV3_03377 TGCTCGGAGAGCCCAACATTGATAGCCCTTTGAACACACATGCTGCCGAGCTCTGGAAAA Gene GeneID:506962|UBE2C:NM_001037449:904_cdna Constitutive 0 NULL GeneID:506962 13 GENE UBE2C MGC134111 ubiquitin-conjugating enzyme E2C EMBV3_43328 GACAGTACCAGGCAAAGACAGCAGAACTGACTCACGCCAACAACCTCGTGGATCAAAATG Gene GeneID:526711|CCDC102B:XM_002697694:217_cdna Constitutive 0 NULL GeneID:526711 24 GENE CCDC102B NULL coiled-coil domain containing 102B EMBV3_40921 GACAGGAACAAGACCCAGACATTCCAAGCCCAGGTCCAGGGTAGTCGGATGGGATTGAAA Gene GeneID:506622|TMEM219:NM_001080231:263_cdna Constitutive 0 NULL GeneID:506622 25 GENE TMEM219 MGC138908 transmembrane protein 219 EMBV3_15099 AGAACAGTCTTCTTGATTGGCTTCATGTGGTTGCATCTGACAAGGAGACCTACGGGCTTT Gene GeneID:100299192|LOC100299192:XM_002692612:59_cdna Constitutive 0 NULL GeneID:100299192 14 GENE LOC100299192 NULL similar to ribosomal protein L22 like 1 EMBV3_24903 TGACGTATTCACCAATCCACCAGTTACCATTCTGGAGAAATTTACACATGCATCCAGGGC Gene BVT0102_054554 + 0 NULL GK000018.2:49933688-49964823 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086617 TCONS_00086616 1 XLOC_052193 Coding TCONS_00086616 XLOC_052193 Coding Coding C18H19orf47 18:49960075-49983273 j TSS64418 6256 1 TCONS_00086616_2 370 0.339993606138107 10 0.73074104410053 0.000599335172963868 0.000279701306855509 0.000264021903865866 5.86648490146695e-05 0.000200370375445466 0.000233064269112596 0.000220165449713915 5.47095490071394e-05 0.000187829376910447 1.78030256821735e-08 8.31780834739815e-06 1.58952486467403e-08 7.99680744686577e-05 1.1464930788433e-05 6.18461134058285e-05 0.000431283250373357 0 1.05217317768828e-07 0.000192962915587439 0.000318870775335014 0.000104076653528666 0.000101937731113471 3.89961823026173e-08 0.000134874585307463 7.45353999989688e-05 0.000246753466706388 3.00754286540957e-05 2.90569176478393e-05 1.27532861937313e-05 9.65378444161861e-05 NM_001080291.1 C18H19orf47 Bos taurus chromosome 18 open reading frame, human C19orf47 (C18H19orf47), mRNA. 0.0 2381 99.92 0.211317135549872 XM_005258521.1 C19orf47 PREDICTED: Homo sapiens chromosome 19 open reading frame 47 (C19orf47), transcript variant X2, mRNA. 0.0 1620 87.15 0.211317135549872 TCONS_00086616_2 sp|Q8R3Y5|CS047_MOUSE CS047_MOUSE Uncharacterized protein C19orf47 homolog; 0.0 545 87.94 0.913513513513514 0 coding 0 0 0 0 -0.189616470691183 0.459751633487197 -0.00661302774324991 0.903925250601934 ACAGATTGTAGCCTGCCAAGCTCCTCTGTCCGTGGGATTTCCCAAGCAAGAATACTAGAGTGGGTTGCCATTTCCTCCTCCAGAGGATCTTCCCAACCCAGGGATCGAACCTGAGTCTCCTGCATTGCAGGCAGATTCTTTACCACTGAGCCACCAGGGAGGATACCAGTACCTAAAGGCTTCTAGCTCCAGGGAGCGGCGTGAAGGCCCGGGAGACAATGGTCTCGGTGACTATGGCCACTTCTGAGTGGATCCAGTTCTTTAAGGAAGCTGGCATTCCTCCAGGACCTGCTGTCAATTATGCCGTGATGTTTGTGGATAATAGAATCCAGAAGAGCATGCTGCTGGACCTCAACAAGGAGATCATGAATGAGCTGGGCGTGACTGTGGTGGGCGACATCATTGCCATCCTCAAGCATGCCAAGGTGGTGCACCGCCAGGATATGTGCAAAGCTGCCACTGAGTCGGTGCCCTGCAGCCCCAGCCCCCTCCCAAGCGAGATTCGTCGAGGTGCCTCTAGCGCCGCCTCCCGAATGATCACCAACAGCCTGAACCGAGACTCCCCACCCGGCACCCCCCCGAGGCGGCCAGACACCAGCACCTCCAAGATCTCTGTCACCGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCTGCTGCCCTGGCCCACCGAGAGGAGGAGAGCCTGAGTGTTCCCACCAAGCGGCGCCGGGTCACCGCCGAGATGGAGGGAAAGTACATTATCAACATGCCCAAAGGCACCACCCCCAGGACCCGGAAGATCCTGGAGCAGCAGCAGGCAGCAAAAGGTCTCCACAGGACATCTGTGTTTGATCGCCTCGGCGCTGAGACCAAGGCAGACACCACAACGGGGAATAAACCCACCGGAGTCTTCAGCCGCCTGGGGGCCACGCCCGAGACAGACGAGGATCTGGCTTGGGACAGTGACAACGACAGCAGCAGCAGCTCTGTCCTGCAGTACGCCGGGGTCCTGAAGAAGCTAGGCCGCGCCCCCGCCAAGGCCAGCCCGCAGCCTGCACTGACTGTCAAGGCCAAGGCGACGAGCTCGGCGCCGACCGCTGCCGCCCCCACGCTGCGGCGCCTGGCCCTCTCTTCGCGCCCGGCGCCCGAGAGGAAGCCAGAGGCCCTGTCCAAAGTCAGCATCATCCAGAGACTGGGCAAGCCTGCCCTCGTGCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAAGAGCCCGACTGTCCGCTGCGTCCTGCCTGACCCTCCTGCACCTCCGGCCTCCCAGCGGCGCCCTCGTCGGCGGTGGCGTCGAGCCAGTAGAGACTGTTAGCCGCCCTCACTCCCAGGCTGGAGGGACCTCCCCAGATCCTGGGCTGTAGCCAGGGCACCCGCCCGGGCCTTTTTTCTCCCTGAAAGTCTGTGGCGGGCGGCGGGTAAGGGGCACGGAGATGGGAAGCCAACACCGAGAGAAGAAAACAGCTATTTTAATATATTTTTGTGACTTTCAGACTGTTTCCCTCCCCTTGTTCAGGATGAGTTGCAGGATTGTTTTTTACACGCAGCATAGGGTGGGTGGGGTGCCCGTGGAGAGTTGGGCAGCTCCCTGCACACCTGTAGGCCATGATTCTGCTGCCAGCTCTGAGGTGAAAGGAGTAAGTCATGGTCATCATCCACTTGGGCCACCTCCTCCTGCTCTAGGCACCCCTATGGGTTCTGTCTGTCTGCCCTCCTCGTCATAGGCTTCCCCTGTTTCTGCCAGTCTGCCTGTGAGAGGTTTTCCAGATTACAGCTCCGCTGTGAGGCTGTGGGTTCCTATGGACTGGGCTGTTCACCGTCTCACTGCTGTGCTGTACCTGCTGTCTGCCAGGCCCGTTCTAGGGGCTGGGGTTCCATCCGTGAGCCAAGCAGACCCGTCCCTGTCTGCATGGCTGACCTCGCCAGCCAGAGAGACAAGTGGTAAAGTGATCACGCTGCTCAGAGTAGGAAGGAAGGATGAGCGCCCATGATCAGGGTCTGTTTAGACGTTTGGGGCAAGAAGGCCTTTCAGAGGAGGTGACCTGTAGGGTGGTTTATGTGAAGTTCAGGAGGAGAGTGCTCAAGCAGGGTAAACAGGCAAGGGCAAGGCCCCGAGGTGGGACGGGGGGACACGGAGGAGACCAGCGTGGCCGGTGACCGAGTGAGTGAGTGATGGGCCTAAGGAATTTGAACCCCTTCCTGAGAGCGTTGAGGAGTTTGGGAGGATTTGAGACTAACAGGTGGTGATCGGAGTTGCCTTGTATGAAGGTTGCTGGGGCCACCGTGAGGAGTTGTCAGGAGGGTGGGATGGAGGCAGGGAGGCAGCCTGGGGGGAAGTGGTGGGCTGGGGAGGAGAGGCAGGGGCGGACTTTGGGGGTGCCTTGAGAGAGGCAGCAGGATTCTCCCTGCAGATGGGTTGGCATTTGGGAAAAGACAAGGGGCTGGATCACGCCTGGATGGGGGACTTGAGCATCCAGAGGAACGTGCTGTTCTGTAGCGCTGGGTGGGGCAGAAGGGCACTCAGGTTTCACCAGGTTGACTGAGAGGTAAGCAGCCTGCGGGGAACACTCAGGGCACAGGCTTGTTCACAGCCGCAGGCCTGGTGATACTAGCCGGAGAAGAACCCAGAGAGAAGAGGGGACCCAGAAGGGAGTGGGGGTGCTTTTCCCACCTAGAGAATAGTCTCTGATAAGGAGATTACCAAGGAGTGGTCAGGGAGTTAGGAGGAGAACTGAGAGCAGGTAAAGATGAGGTTAGACTGCATCCTTTTTTTTTTTTTGCATTGTTTTTTTTTTTCCATTTTCCATTTCAACACAACACTGACCATTTGAACCGTTCTTACGTGCCCTCTTCAGCGGCTCTAAGTGCATTCACACTGTTGTATAACCGTCACCCATTTCAGACCTGTTTTTGTCTTCATAAACCATCATCTGTTTATTTTTATTTTGTTGGCGCCGTCATGCCGGGAGGCTGCTGCATGTCAGGCAGAGTCCCACGCGCTGGGCCTGCGGTGTGCGGGGCCAGACTTCAGTATGAGGGGCAGTGATAGAGGAGCCATAGACCCCCACCTCTGGCCCAGGCCAGACCTCAGAAGGACAGCAAATGATGGTGATGTCAAGGTCCCAGAGGCCGCCCATTTGTGTCAGGGCCACAAGGAGGCGCTCACACACAGAGACACTTTCCTTGCGGTTCTTCACCTCTTCTTTTTGTCTTTAAAGACCCTCCTAGCGATTTCCTTGAGTTCCACTTCATGGATAACTTGAGCAACTGCCAGGGTTGCCTGGCGGGGTTTCAGTTACTAAATTTAAGAGCACAGTATAATTTCTTAATGCGTAATAGGAACTAAAATGATATAAAAACATGTCCCTTATCATGACAAGCTTACCTGCTGTGAGGTAAGTCGAGTCACGGTTGCTCCTGACAGAGGCGCGGAGGGGGACAGACAGCTGGCAGGTGGCGGCGCTGGGTGTGACGCTGGGAGGTGAGCGGGCACCTCGCCCCTCAGCCTCTGCCCTGCGCTGCCTCAGCTGCAGATTGGAAACAGGGCCCCTTTTGTAAAGGGGAGGGCAGGGTCCTGGGAGAGTGGTTTTGGGTATCCTCGAGTTGTTTGTGTGTATGCACTACCCCGTTACTTACCCCAGAGCACTTGCAGCTCTGGAAGGCCGGGGGCCTTGAGGGTGGTGCCCATCCTACCACCGCCTGCCTGACAGGGCGGAGCTGGACCCCTCAGCCTCCCAGCGTCCCACCCATTTGATTCGGTGATTCTCCCAATCCAGCCCCAACAGCTGTGGCCCACAGGGGTGTATTATTTTTTCCTCTGGTTCTCTGAAACATTTTCGAGCATAAGTATTGGGTTGGCCAAAAAGTTCATTTGGCCTTTCCATAAACATCTCACGGAAAATCCTGAATGAAATTTTTGGCCAACCCAAAAGACTACATATACCTAGTGTAAAATGCCAAGATACAAAGGCTTCACAGTGAAAAGTCTCTTCCCAAGCCCCCTCCTCAGAGGCCACCAGTGTTAGCAGTGTCTTGGCTCACCCTTCCAGAGATGTGTCTGTACACACACACACACACACACACGTGCATGCATACAGATAGCCAGAGGAACACAGTATGCACGGATGTGCACATACATGTTAATGGCCTAGCTTACTCAACCAGTCCTTCAGGGAAGGGGATTCGGGTTGTTTCCAGTTCCTTGTCATTACAAGTAGTGCTGCTTGGGGAAAGGTGGGTTGGGTTCAGGGGTGAATTGGGAGAACTCCAATGACACCACTTCAGTGCAAACACTGACGTTGGGTCAACAGCACATCCCAATGGGTTCTCCCCCAAAGTCTTGGCATTCTTCAAATGATTTACTTATACATGTATCACCCCATTCCAGAAAGGAATTAAGAGCAGTTTGGCTCGTCCAATTGGAGGCCGCTGGAGGAAGGGGATCAGGGGATGTGAAGAGGTAATGTGGACCACCACCCAGGTGTCAGGAAGTACAAAGGATGTGCTTTGCTAAGTTAATTAGGCTTAAGAGGTCTTTGCACATGTGGAGCCTGCCTGTTTATGCTGCTTCTGGGAACCCTGCAGCCACCCCTGTGGAGATGAGCCTGGGCTAGGCAGCTGCATAATGAGAGACATGTGGCGTGGCCAAAAAACAAAAAGTAATCTTAGTATGGAACCCCAATATAGAAAACATGTTTAAAACAGAAAAGCAGTCATTTATTAGCATATATTTATCAGATTATTTTGCATTAATTCATGCAAACAACACGAAATTCAAAGGTACAAAAGGATGTATACAATAAGACTCTTTCGTGCCCAGTGGGCTGGCGAAAAGATTAAAGTCTCAAGTGTTGGGGAAGATGTAGGATAGTAGTAGTGCATAGACTGCTGTTGGAATGTAAGTTGGCATCAGCATTTTGGACAACAGTTTGATATGTTGTAGCGTAATTGAAGATGACGTATTCACCAATCCACCAGTTACCATTCTGGAGAAATTTACACATGCATCCAGGGCAAGTATCAGAATGTTCGTAAGATCACTGTTGTAGTAGCATAAGCTTAGAAACAACTCAGATATCCGTCAGCTGGAGAATGGGCAGATTGTAGCATATATATTCTAGTTACCTAATGCATAGTGGAGCACCTCAAAACTTGGTGGCTTAAATCAGTAATCATTTCCTGTGGTTATGGGGAGTTGACTATGCTCAATTAGACTGTTGTAACTTGGGGCTCTCATGTGCTTGGTGTAAGATCTTGGCTGGGCCGGTGTCCTCTTGAAAGCCTCCTCAGTTGTCTGGTGGTTAGCCAATACTGGTACTGAGGTAATATCTCAGCATGGGCCGTCAGCCAGGATGCCTGCCTGTGGCTCCTCCATGTGACCTGGGCTTTATTACAACATGGCAGCTGGATTCAAAGTGCACTCTTCTTAAGAGTCAGGGAAAAGTGTGTTGCCTTTTCTAACCTAGCATTGGAAGTCACCTTGCTTCACTTCTGCCACAGTCACTAGCCTGCCCAGATTCAAGAGGGACCACAGGCCGTGGCTCTCAAGACAGGAAAGGCAGTGTCTCATTGTAAGAAGAGGGATGAGAGATCATCTTGAAAACTTACACGTCAATCCTGGATGTACTGTGTATTGAGTGTGGATATTATACTTCGATGAAAACTAAAGTTGTGCATATTAATATGAATAAAGCAAAACATTGAGTGGTAAAAGCAAACTACCGAAGAATATGTGTAGTTTAAAGATATGCGAAATAGGGAGTTCACTGGTGGCCTAGTGGTTAGGGTTCTGGGCTTTCACTGCTGTGGCCTGGGTTCAGTCCCTGGTCAAGGAACTGAGATCCCACAAGCTGCACAGCCAACAACAACCAAAAAAGCAAAATAATGTGTATTGGTTACAGATACTTAAGAGTGTAGTAAATGTAGCCAGTGCATGGGGATGATCAGTTCCAAGTGAAGGATAGTAGACGCCTTCTGGGGTGGGCTGGACTGTGACTGGAGGGGTGTGCATAGGGCCCAGCAGTGTGGCAGTCGTTTTAAAGCTGTGGGCACCCAGGTGTCCATTGTGTTAATACTCTCTGGGTACCTGAGAGCAATTAAAAAATAGCAGTTCTCTCTCCTACTCTAGATCCCTCAGCCATCCAGTTTTCGTCTCCAGAAGCCATCAGTATTACTGGGGTCTTATGTGTCCTTCCAGAAACATTTCATTTACAAACATAACTATATTTTTTTCCCACTCAG EMBV3_05662 TGGATACCGCCTGTCTAAACCACTTCACGCGTTAGTATTTATTTACCAGTCCTGAAGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33010 CCCTCTTCCTTGCTTTCTCTCTGCCACCCTTAATTTAGACATTCTGACTGACACCTCAGT Gene GeneID:512286|LOC512286:XR_083621:78_cdna Constitutive 0 NULL GeneID:512286 3 PSEUDO LOC512286 NULL similar to CD1D antigen, d polypeptide EMBV3_22085 GGGGGGCCAAAGACTGAATAACATCCTTCCTTAGGAGACAGACCCTTTGCTGATGAAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07750 GACTCCCAAATCTACACTTCTCCCGAGCTCACTACCCTGATATTCAACTGCCTCTTGGAC Gene BVT0102_260110 + 1 EMBV3_38135 GK000012.2:18717381-18844596 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32043 AGTGAAAGTGAGAATTCAGAAGTAGAAAATATTTTTTTTAGCAAATAATTTCATGGTTTA Variant GeneID:520297|ADAM32:NM_001046250:79_cdna 156^217 1 EMBV3_27093 GeneID:520297 27 GENE ADAM32 MGC133811 ADAM metallopeptidase domain 32 EMBV3_08325 TTGGTTTCACAGGAAAGCCCAGCAGAATCGGAGAGGATTTTCCGAGGAGCAGCTTCGCCA Gene GeneID:515562|TAGLN3:NM_001034499:71_cdna Constitutive 0 NULL GeneID:515562 1 GENE TAGLN3 MGC128242 transgelin 3 EMBV3_22389 TTTCTTCCATTGCCTGCATGCTCTGTCATATCGGATTCTCTGCGACCCATGGAGTAGTCA Gene BVT0102_443722 - 1 EMBV3_13290 GK000013.2:78747537-78766067 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17688 TCTCCCCTGGTGCTTTGCCTCAAGGTGGCATTTACTGAGACCCAGCTTCACCCACATAAT Gene GeneID:530151|DUOXA1:NM_001099046:80_cdna Constitutive 0 NULL GeneID:530151 10 GENE DUOXA1 MGC160003 dual oxidase maturation factor 1 EMBV3_16934 TATATGAACAGATCAGGAAGACTGGTGGAGCACTGGGAGCACCAATATGGAGAGGGAGAC Gene GeneID:786578|LOC786578:XM_002699585:71_cdna Constitutive 0 NULL GeneID:786578 X GENE LOC786578 NULL hypothetical LOC786578 EMBV3_42890 CGACTTCCCTAACTTAGTAAAGACGGTCTACAGAAACTCATAACAAACATTTTTAAGGGG Gene BVV0102_163426 + 1 EMBV3_24048 GK000001.2:151021273-151034216 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011949 1 XLOC_007499 NonCoding TCONS_00011949 XLOC_007499 NonCoding NonCoding - 1:151022839-151027510 - TSS9026 4671 2 TCONS_00011949_1 102 0.806465424962535 1 0 0.00037866485280727 0.000307866914361525 0.000292220766957595 0.000275560225871449 0.000195014067400372 0.000375242307872528 0.000414678180043433 0.000423818473609675 0.000654132210160297 7.92773198930629e-06 4.90086014460663e-07 2.29652083983881e-05 5.00634422577703e-05 0.000126386819067086 6.72226147009217e-05 0.00023182928773768 0.00012084727853557 3.76014192833012e-05 0.000401953920880516 0.000234788574116115 8.903762340922e-05 3.01848025186905e-05 7.85616788504371e-06 7.53708176423735e-05 0.000350056778954083 0.000180624121955309 0.000164478560209344 1.6450729587994e-05 2.07861791987099e-06 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 3e-54 219 81.09 0.0507385998715479 0 noncoding TTCTGCCCAGGGTCCTGGCGATAGAAACAAGGTAGACAGCTTACAGGTTTCAATCCTCCTTTGGGAGCAATTTCCTCATAATTACAGCTCTGGTTAGGTACATTTTGTATTGCAGGAAATTTGCGTTTTATCCTAAGGGATATGGGATTTATTACAAGGCTTCACAGGGAAGGAAACTTCAAACATATTAGAAACCCAGCTGCTCCTCTTGGTTGTCAAAGGTTCGTGCTCTGCGCTCAAGGGCTGCGTTTTTGGTCTCTGTTTCTCCCTGTTCATTTGCTCAGTTTTCTTACTCTTGCCTCATTTTCTGGCATTTTGTTTCTTTTCAATTTCTGGAAGGTTTCAGACGTAGAATACAGAGTGGGATCTAACCAGTTCATGACTGAGATTTACAGATGTAATTATTTTGCCGAATTTACTTCAGATCCTCTTTTTAGTTTAAAGAACTAAAATTGCAAAATATGGAGGTGCTCTCATTCCCGCCTCTCTTTTCCTAGCGGTAGTCACCGTGTTTAGGTTTGTGTATATTTCCTTGCATATTTTATACTTTGATCACGGTGAATCCATTAACAATATATAGTGTTGTTTTTTAGTGTGTATTTTAAACTTTAATGGTATTAAACAATATGTGTCTTTTTGCAACTTGCTTTTTTCGATCAGCATCCCATTTTCAGATTTACATGTGAATAAATTGGATAATTGTGTTTGGTTCATTTTAATTGCTGATATAGAATTCCATTGTATGAATATACCATAATTTACTGATCCGTTTACTAATCCGTTTTCCTACCGATGGACTCTGAAGGTTTTTGACTCTAAAAACAGTCCTGCTTTGAACATCCTTGTATTTGTCTGCTTTGTGCACGTTTGGAAATTTCTTGAGAAAATACACCTAATAGTGGGTTTTGCTGCATAGTAGGATGTATGCATCTTCAATGTAACCAAATATCACAGAAGCTCTCAAAGTGCTTACACTAACTCATCACTCTGAGTGGTACTGAGTGAAGACACCCATTTCCTCACACTATTGCTAAACCCTTTATGTTACCTGACTTACATTTTTGCCTCCTCTTTACTGACCAGCTTCCTTATAACTTTAACTTGCAGCTGAATTTGCCTACAGCCGCCTTGGCTTCTGCTCTAGCCCTGTGTAAAGCCTATGGGTTCCTCTCTCAGAGCTGACTCAATCTTTTATCTCATTCGGTTCTCATAAAACTAATTGCAGTGAACATTTATTTTGTACCTAATGTACTTCCTATGGTTGATGTAAGATAAAGATTTCCATGGTATGTTAGATGTACCTCTCTAGTGGCAGGTGAGGTGATTTAATTATTTTTTGCATATGATGAATGGGTTTTAAAAAATCTTTTTTCCTCTTTAATGTACTACTTATACTTAATGCTTTCAAAATATGTGTAACATATATACAAGTTGTGAAGCAAGGCAATAAAATGAACGCCTCTCAACCCACCACTCAATCCAAGAATCAAAATGACCGATTTTGAATGTTACCATCCCCAGGGTGACTTCTATTGAATTGTGTGTCATTCCTTGTATTTTAAAAATAATTTTATCAAATATGTGTATATCCCTCAACAGTGTATTGTATGGTTTCTATTGTTTTTGAATTTTACAGTTTGTTGGGCTGGCTTATTTCACTCAGTGTTATGTTTTTGAGAGTCACTGATATTCAGATAGACATCTCATTAATTTTCATGGCTGTGTAATATTCTGTTGGAGAATATAACACAGTGTATGTACTCTTCTGTTGATGAACATTTTGGTTGTTTCTAGGTTTTGCTATTTTGAAGATTCTTATATATTTCTTCTGGTACACAGTTGCAAGAATTTGTCTGCTTTTCACACTGGGATATATGCCTTCCAGGGAAGTAATAAAAATTTTCTGAGGGGTATTTGGGCACAAGTGATATTAATGAATCAATTTGTAGATACTAAATTCCACGTGTATCCTTTCCTAAAATTGGTAATGCCTGAAGCCTGTGATAGAAACTTCCTCTTGGCTCTACTTGCCCACCTCCCCCTTCAGAGTAGCATTTCTGCCTTAAATTAGGAAGGCATACCACTTACTTGCATGGAATCTTATCAGGGTAACGTCCCAATTGAAAAACTCTCCATGGAACAAAAGGATAATTTAAAATACATGCAGCTATAGTGTTAGGAAACACTTCTTTTAATGCAGACACTTTCCATCTCCTCAAGAGCTGCGTTTCCAATAAAGTGTAACTTTTATGTTTAATTATCAGCATTATGTAGGGTTTCCCAGGTGATGGTAGTGGTGAAGAATCTGTCTTCTAATGCTGGGGGTGTAAGAGACGCAGGTTCAAGCCCTGGGCAGGGAATATCCTCTGGGGGAGGGCATGGCAACCTACTCCAGTATTCTTGCCTGGAGAATCCCGTGGACACAGGAGCCTGGTGGGCTACCGTCCATAGGGTCACAAAGAGTGGGACACAGCTGAAGTGACTTAGAGTGCACACACACAAACACATCAGCATATATACTAGTTATCTTTTGATGAACTCGATGCTGTAATAATTACAACATTTTAAACCAGTGATATGTCAGTGTTATTTTAAAATGTCACTGTGATACTCTAGCAATTAAACTTAGGACTGAAATTTTTTAGATGTCATTTAAAGTATGAGTGTAATCTTTAATAGCATTTATTGTGGTTCATCAGTAAAAAGAATGTTGAAATACCACTGTGGTAAGCTATTTACTAGAAGTGGAATTGCTGGACTGTGGGGTATGAATATATGGTTCAACTATAAAATGACACCAAATTGTTTTCTGAAGTGGTTGTACCAGCTTATGCTTTGGTGAGCTATTTTGTCAATTTATATACTTTGATTAGCATTGTGTTAAGATTTACAGTTGATCTATATCCTTTGCAACACTTGTTACTTGTCAAACTTCTTAATATTTGCCAAATGGATATGAAATGTGCATTGTGGTTTTAATGTGCATTTATTGATTGTTAATGACTTTGAACATCTTTTCCTTTGTCTGTGAACCATCTATCTCCCTTTTATTCACAAAAAGGAAATTGATCGTTCACACACAGACACACACACAAATACCTGGTCATATCTCTCACCCACTTTTCTGTTGGGTTCTCTTTTAAAACTGTAACAGGTAACAGTAATCGTTTATTAGGAATATACATTGTAAATATCTTATTCCAGTTCGTGGTCTTTTTGCACTTTATGGTGTGTTTTGGTGAACAGAAGTTCTTAATTTCAAGGTAATCTAATCGGAAATTTACAATGCCCTGGGATCATCAAGACATTCTCCTGTGTTTCTCTTTAAAAATTTTTAAATGATGCCTTTCACATTTAAGTTGGTAATCCATCTGGTACTGATTTTTGTATATGGTGTGAGTTAATGATCCACACTCATTTTTCCCTCCATGTGGCTACAGTTGACCACATACCATGTATTGAATTGGCTCTCTGTTCACCAGTGATCTGCTGAACCACCTTTTTTTACATGTTTAGTTTCTATATGCATGGATCTGTTTCTGATTCTCCTTTCTGTACCACTTGTCCACCTGTCTATCTGTTGATAGCACACTGTCATGATTATTAATGCTGTAGTTTTACCTGACATCTTGATGTTTGGGGGGCACTTGAGTCTTAGCTGTTTTTGTAAGAATCTTGTCATATGGCAGAAGAAGCTTTTCAGGAATGAATTGGAATGATTAAAATCAGTTTGGAGAGATTTGAAATCTTTAAGATTTTGAGGTATGTATTTCCATTTATTTAGGTTTCTAATGACTTTGATACAGTTTTGTGAATTTTTCCTTACAGATCTAACAGTTTTTAAATGTTGATTCTGATGTTTCTAGGAGTTTTGTTGCTGTTACAAATGATGCTTTTTAGATTCTGTTTCCTGTTTGTTAATAGAAATTTATGGATTTTTTTACACTGAACTTTAGTCATTCACTTGATAAACACTTATTCTGATATATTTTCTATAATTCTTTTGGGTTTTCTATGTGGATAATTATATCACTTGCAAATAGTGACACTTTTGGTTCTCCTTTCCTTTCCAATTTTCCTTAATTTTTTTTTTCTTGGCTTATTATGCTGGCACACTTCTAGATCTATGTTTGATGGATGTGATTATGGTTATTAGAAGTGATTTATAGTGAGCATACATGTTTGTTCTTGATTTCAAAAAGAATGTTTTCCCCTTAAAAATGTTTGTTATGAGTTTCTGTAGACAGTCTTTACTAAGTTAGGGAAGTCGTCATTTGCCTATTTTGTCACATGCTTCTCTGCGTCTGTTGACAGTATCTTGTGGATTTTCTCCTTTAATACACTAAGTGTAGTGGTTCCAATTTATATATTTAAAAATTCTTAATTCTCTCTTACATTTGTTCTTAAGATAGATGTAAGTTGACTTTGATGGGTTGTCTTTTTGTGAACTGGATGAAGTTTGCTAGTATTTTATTTAGATTTTTGCATCTGTTGATGAATGAAATCACCTGTCATTTTTTTTCTTGACTATCTTGTCTGGTTTTGGTGTTCAGGTTACACTGCTTTATGCCAGGTACAGTGATTCATTTTTTTTCTCTTCTCTGGACAGTTTGGATTGGAGTAATTTGTTTCTTAAAAGCTTGGTGGCATTTACCTGTGAGATCGTTTGGA TCONS_00002679 . 3' 212 TCONS_00002679 . 3' 4882 EMBV3_33129 TAGCTAGAGAACTTTCTGGAACCATTAAAGAGATCCTGGGGACCGCCCAGTCTGTGGGCT Gene GeneID:404133|RPL12:NM_205797:16_cdna Constitutive 0 NULL GeneID:404133 11 GENE RPL12 NULL ribosomal protein L12 EMBV3_17715 AGATATTGAGCGTGGTGATATAGTGATTGGAAAGCTTGCAGTGTCTCTATATAGCTCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23092 TCCTCATGACTCTCCTCCAGTTCCACCAATTCCGGACACCCCTCCCTGCCAAGCCAGACT Gene GeneID:506075|GEFT:XM_002687559:581_cdna Constitutive 0 NULL GeneID:506075 5 GENE GEFT NULL RAC/CDC42 exchange factor EMBV3_04936 GGAGCGCCTGTACTCGGAGAGTCCCCTCAATCACTACTGTACGTAACGTTTCCACAAAGA Gene GeneID:511779|MAP3K4:XM_002690377:5_cdna Constitutive 0 NULL GeneID:511779 9 GENE MAP3K4 NULL mitogen-activated protein kinase kinase kinase 4 EMBV3_16353 CGCCTTCATGGAACATGAGGCTTCATTTAGCAAGGCTTGAGTTACATCTTACGAAAAGGC Gene GeneID:281641|ATP6V1G1:NM_174245:5_cdna Constitutive 0 NULL GeneID:281641 8 GENE ATP6V1G1 ATP6J MGC133844 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 EMBV3_30171 CCCTTTGAACCTCAGTCTCCGTATCTTTAAAATGGCGGATATCCAGTGATAGAGACACTG Gene GeneID:100137734|PILRA:XM_002698210:778_cdna UTR3_Alt 2 NULL GeneID:100137734 25 GENE PILRA NULL paired immunoglobin-like type 2 receptor alpha EMBV3_23360 AAGCCAGAAGACAATCAGGATCTCAGTATGGCTCTTTTCCAGGCGGCTTTCCTGGGGGAA Gene GeneID:510494|ST13:NM_001101926:153_cdna UTR3_Alt 2 NULL GeneID:510494 5 GENE ST13 MGC165934 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) EMBV3_21396 GCCTCAGCAGGGCTGAAAAGGGACTCCAAATTAAAATCTCTAGAAATAGCCATTGAACAG Gene GeneID:537173|ERC2:NM_001102195:247_cdna Constitutive 0 NULL GeneID:537173 22 GENE ERC2 MGC152187 ELKS/RAB6-interacting/CAST family member 2 EMBV3_05213 CCTCCACCGCACGAGGCTTTATTAGAGAGAACAAAACAGCAAGAGAAGATGGAGCACCAG Gene GeneID:788561|THNSL1:XM_002692072:192_cdna Constitutive 0 NULL GeneID:788561 13 GENE THNSL1 NULL threonine synthase-like 1 (S. cerevisiae) EMBV3_16035 GACTTCAACCTGTTCTGGTACCTTTCTATGTTGATGTCTTTCTTGCGGCCAGCAGCCTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36579 CAGGTTATGAGTAAACATGCAGTGATATGGCAGAAGACACCAGAGCAAGTGCGGAGAGCC Gene BVT0102_295166 + 1 EMBV3_10598 GK000007.2:17254007-17264356 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212126 TCONS_00212123 TCONS_00212124 1 XLOC_130092 Coding TCONS_00212126 XLOC_130092 Coding Coding LOC508834 7:17255213-17257196 j TSS159252 1669 2 TCONS_00212126_4 67 3 0.159434914228052 0 0 0 1.98974219922474e-05 0 0 0.000108518457283827 0.000931785225696081 0.000434527982142585 0.00011235598420945 0.000185741878041731 0.000250662209376603 0.00188548147567885 0.00463333057228895 0.0062092883402161 0.000587550662580817 0.000407843516938741 0.000902010615441717 0 3.01616318409527e-05 0 0.000902573517865196 0.000654110619903049 0.000328920088337343 1.24682338333121e-05 1.68852909473221e-05 0 5.61020299345922e-09 0.000229763794682066 0.000115273593419526 XM_005208736.1 LOC508834 PREDICTED: Bos taurus RNA-binding protein S1, serine-rich domain-like (LOC508834), transcript variant X1, mRNA. 0.0 2935 99.57 0.980826842420611 XR_242075.1 HNRNPA2B1 PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1 (HNRNPA2B1), transcript variant X2, misc_RNA. 0.0 886 71.44 0.929298981426004 TCONS_00212126_2 sp|P22626|ROA2_HUMAN ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1; 2e-20 83.6 65.00 0.983333333333333 0 noncoding TTGAGCCCCTTCTAAAGGCAAAGAAGATGGAAAAGTACTCAGGATTGATTCAAGGGCGGCAGGAGCTGAGAGGCCATGGCAGCATTGCCAGATCACCGTGGAAGTGCTCCTAGAGGAAATCTGATTGAAGCAACCCAGTCCAATGGAGAAAACCGAGAAATCAATTGCTTTGAAGAGGCAGAAGAGAGAAGCTGAACAAATTAATAAACTCTTTATTGGTGTTTTGAACTTTGAAACTGCAGAAGAAAGTCTGAGGAACTGTTACCAGCAGTGGGGAGAACTTAGAGCCTGTGTGGTCCTGAGGGATCCTTCCAGCCAAAGATGAAGACAGTGTGGTTTTGTCATCTTTTCTTCCCTGACCGAGGTGGATGAAATGTCCACCAGACCCCATTCCATTGATGGCAGAGTGCTTAAACCCAAGCTTGTGTCCCAAGAGCAGCATCTGGACAGCAGGGTGTCCTTTGGACACTGAAGAAACTGTTTGATGGTATTCAACAAGATACTAAGGAACATCATCTTAGAGATTACTTTGAGAAATATGGGAAAATGGTGCCATTGAGATCATTACTGATAGGCAGTCTGGCAAGAAAAGAGGCTTTGGGTTTGTGACTTTTGATGACCTTGATTCTGTGGACAAGACTGTGTTGCCGAAAAACTGTACCATCAATGGTCGTCATGTAAAAGTTGCAAAGGCTTTGTTCACATGGGAAATGCCACAAGTCCAGGGTTCTAGAAGTGGAGGAGGAGGCTGCTTTGGTTTGGGGGTTTATCCTGGTGGTGGTAGCGATTTGGGACTAGCATCAGGATGAGAAAGTAACTTCTGGGAAGGATCTGATACATATGGAAATGGTCCTAGATTTAGGGGTGCTAATCATGGGGCTGGAAAAGGGAGAGACAGAGGGTCTGTCTGGTGGTGAAAGTCCCATATCTGGCAACCATGATTGGGGCTGCAGAGGTGGTCATGGCAACAATGGAGGAGGAAATTGTAGAAGTGGAATTAACAATGACTTTGGAAATTATCAGCAGCAATTTAATTACAGTTGAGGAATGGAAACTTAGGTAGCAGGAACTTGAGGGCTCAATACAGTGAAGGAAACTCTGGTCCAGGAGGCAGTGGGGGATGTGGGGGTTGGGAGGGCAAAGCTGAAACTGAGCTGCTTCTTGTTTGCCCTGGGCTTCACTGTCTAGCGGAGGATGAGAGCCCAGAGTTAACTGGGCAGCTTCAGGTTATGAGTAAACATGCAGTGATATGGCAGAAGACACCAGAGCAAGTGCAGAGAGCCATTTGTGAATGAATTAAATTATTTAAGAACATTGCCTTCCTGCAGAGGAAAAACTGTATGGAAAATGCCTTTGAGGCAGTTTCTTAGCTTAATTGTTTTTTTCTAGTGATCTTTGTCAGAGTGTAGAAGCATCACTTCTTTGATAATGTTAAATTTTGTTTAACATTAAACATTTTGTTATATGTTTGTAAATTGTTAACATTTCTTTGTAAAATGTTACATTTTAAAAAATCTTTTGCAGATTTTTCTCAGTTTTTGAAAAGCTATTAGAAGTATGCTGTAATGAAACATATTAATAACATTATTCCTTAAATTTTAGCATGTAGAATTATTATATGAAGCAGTTGTACATTTATGATTTAATAAAATAATTCTAAAGGAAAAAA EMBV3_28969 GCCGCTCTTGTAGCAGAGAGTGCAGCCATAGGAAGTGCAGAAGCAAACGTGTTCAGTGTT Gene GeneID:613316|LOC613316:XM_002690040:2_cdna Constitutive 0 NULL GeneID:613316 9 GENE LOC613316 NULL similar to ubiquinol--cytochrome c reductase EMBV3_21961 CAACCGCCTACGGGAACTGGCCACCCCTAAGGTCCGAAACAACATCTGGAGCATAAACAT Gene GeneID:788788|THEG:XM_002689159:178_cdna Constitutive 1 NULL GeneID:788788 7 GENE THEG NULL Theg homolog (mouse) EMBV3_15472 GGGCAGAAGTGAAGATCGTGAACACAGGCAAAGCTTTAATTGAGGGGTGTACACAGTTGC Gene BVV0102_040582 - 1 EMBV3_30538 GK000016.2:23175860-23350278 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23137 CTGAAGAAGGAAAAAGAAGACAAAGCTCACCTTCAGGCGGAGGTTCAGCACTTGCGAGAG Gene GeneID:789626|LOC789626:XM_002685464:30_cdna Constitutive 0 NULL GeneID:789626 2 GENE LOC789626 NULL similar to Signal-induced proliferation-associated 1-like protein 1 (High-risk human papilloma viruses E6 oncoproteins targeted protein 1) (E6-targeted protein 1) EMBV3_07994 GCAACTCATTGGAGGACTTTTTGCATGTACAGGAAAGTTGTGGATGGAGAAGGTTTGTGG Gene GeneID:509083|PDZRN3:XM_002696955:93_cdna Constitutive 0 NULL GeneID:509083 22 GENE PDZRN3 NULL PDZ domain containing RING finger 3 EMBV3_03263 CCACGGTAGACGGCAAGACCGTCCTTGTGGCAGACATGAAGATGACCCAAAAAAGTTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42511 TGCTGACTGCCTATTTAAAGAAGAGAATAAACGCCGTGCATCAAAGTGTTTGTATGTTCG Gene GeneID:538617|TRIM2:NM_001083735:22_cdna UTR3_Alt 2 NULL GeneID:538617 17 GENE TRIM2 MGC137696 tripartite motif-containing 2 EMBV3_42952 TCTGAAGAGCACTGACTACACTTTACAGGTACCCACCATTTGTACACTTCCCAGAGAGAC Gene GeneID:536286|ITGB8:XM_002686704:2_cdna Constitutive 0 NULL GeneID:536286 4 GENE ITGB8 NULL integrin, beta 8 EMBV3_25770 TTTGCTATCGCCCTGTCTTTGCTGTTGGCTAAACCCAATGCCCGGTTTGATGCTACTGCT Gene GeneID:404162|B3GAT3:NM_205805:34_cdna Constitutive 1 NULL GeneID:404162 29 GENE B3GAT3 NULL beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) EMBV3_18683 TTTTTCAAAGCCCTCCATGGGCCTAAGCCAACTAGCATAATCATACATGCGCTTCACATG Gene BVV0102_355787 + 0 NULL GK000005.2:24922636-24928561 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194202 TCONS_00194203 TCONS_00194200 TCONS_00194201 TCONS_00194204 1 XLOC_117689 Coding TCONS_00194200 XLOC_117689 Coding Coding FGD6 5:24926229-25031195 j TSS144963 6905 1 TCONS_00194200_4 893 19 0.934397180012385 1.28385313684228e-06 2.61646430249089e-11 5.64665136526365e-05 2.47447482650236e-10 4.79949137910656e-53 1.31472114883187e-11 9.14296723715346e-07 1.35321844964585e-08 0.000121357456631143 6.1339497072602e-149 3.24615423256754e-08 6.56284064444134e-84 1.60791146289198e-06 3.74698340601291e-05 3.54340739283705e-08 0.000405157115930578 0.000553514920258858 0.00110430739042911 4.83692008403932e-08 4.4018663156076e-08 3.19397613153017e-05 1.25289335506371e-08 3.59023660329746e-05 1.32033784712717e-10 1.85144051741353e-05 6.23888672298963e-05 3.79849130328494e-05 0.000136487977467061 4.56756379433158e-05 1.17536841766292e-05 XM_587549.7 FGD6 PREDICTED: Bos taurus FYVE, RhoGEF and PH domain containing 6 (FGD6), transcript variant X2, mRNA. 0.0 6235 99.12 0.505430847212165 NM_018351.3 FGD6 Homo sapiens FYVE, RhoGEF and PH domain containing 6 (FGD6), mRNA. 0.0 3930 84.68 0.506154960173787 TCONS_00194200_4 sp|Q6ZV73|FGD6_HUMAN FGD6_HUMAN FYVE, RhoGEF and PH domain-containing protein 6; 0.0 1231 75.06 0.994400895856663 0 coding 0 0 0 0 0.981459452096201 0.0797032596556375 -0.135642434474697 0.0303846799483562 GCGCCGCCGGGTCCTTAGAGCCGGCAGGCAGCTCCCTTTGTGCGGCGCTCGCGCCGCGGTCCCTCCGGACGGAATGTGGGCTCTGTGGGAGTTTTTCTCTTCTTCCCAAATTCTTGAAACAATGGACTGTAAGGGGCGCGGGGATTAAGGGGGGCGAGCTGGGAAGCGACCTGCACTGGGGAATCATGACTTCTGCTGCAGAGATTAAGAAGCCACCAGTGGCCCCCAAACCAAAGTTTGTTCTGGCAGCTAATAAGCCAGCTCCACCTCCTGTCGCACCTAAACCTGAGATCTTGGTTTCTAGTGTTCCACAGTCAACAAAGAAAACCAAACCATCCATAGCTCCAAAACCAAAAGTTCTGAAGGCCTCACCTGTCCAGGACATCACACAGTCACCATCAAGGAAAATCGTCGTGAACCTGGAAGAGCATACACAGGAATTCCCTGAAAGTATTGACAACTCGAACTGCAGAAACAGAGGGCATCCGAGCAGTGATTATATTTTACCAGTGTGTTCCTGCCATCCTGGATGTAACCATAAGCTTGAGAGCAGAAAGAATTTGTATGTCAAGCAGCTTGTCTTAGGGCCCCTGGAAATGCATGAGAATTTAGAAAACAACAAAATTGGTGAGTCCCCTTCAGCTGTGAAAAATCAGCATAAATGTGATTCTGTTGGTGAAAGGGTCAAGAGCCAGAGTAAAGTAGTTTTAAAGGCAAGCATCCTCGAAGAGAAGCTCAAAGATGTTTTAACACAACCAATGTCACCCTTTCTTTTCCCCCAGAAGCACAGATCCACAGACAGTCCAGAAATGAGTGATGGCTGTAATTCCCACAGACAATTCAGCATTGAATTTGCAGATTTGTCACCTTCCCTGTCCAGCTTTGAAAACGTTTCTAATCATCACCCTTGCCACCTACAACTTCCTAGCACTGAATTTCAAAATTTTGAAACTAATCAGAATGACAGTGAAAAAAGCAACACTTGCTATCATTCATCTGAACAAGAAGCTCTAGAAAATGGAAAAAGGAGTCCTTTCTTATCTTCAGATGGAGATAGTAAGAAATCAGAAGCCAGAGACCTTGGTCCCTTGGAAATCCACTTAGTGCCATGTACTCCCAAATTTCCAACTCCCAAGCCCAGAAAAACACATGTTGCACGCCTCTTACGCCAGAGACATATAGATACTTCTAGTGAAAGTACTGAAGAACCAGAGGATGTAGACAGCTTGCCTCATGTTTTCGAAGATAGTTTGAAAAACAATAAAATCAGTGTCTTTCATCAGACTGCTTTGTGTAACCAGGAACAGGTGGACAAAGTGAAGCCAGAAAATAAAGGTGAATTGAATGTGGACCTCACTGGTGACAGACAAAACTCGGTCTATTCACAGAAAGCCTTGCGTCCTGAAACATTTTCCTCTGAAAAAACGGCACCTCCTTTAGAAACAGACTCTAACTTGAGTTCTGACGACAAGTCAGGAGATAGTTCTGGTATGTCACTTGCCGAGGACAAAGGAATCAGTTTTATAAGATGCAGTACTCTATCTATGAGCCTGCCCAAGCAGCTCAAATTAACCTGCAGCGAACATTTGCCTACTGCCTCTAACCCAGGAGTGTCTGCCCCTCAAATGCAAAAGGAATCTATGATAAAAGGTGAAAGTTCCTCAAAAGTTGTCCCCAAAAAACCTCAAAGACACAGTTTGCCTGCTGCCGGAGTGCTTAAAAAGGCTGCCTCTGAGGAGCTTTTGGAGAAAAGTTCTTATCCCTCAAATGAAGAAAAAGATGCAGAGAAGGGTCTAGAAAGAGATCACGTGCAGCATTTATGTGCCCCAAACAATGGTATGTCATCCTCCTTTGATATGCCTAAACGGGCTTCAGAGAAGCCAGTGTGGAAATTACCTCATCCCATTATCCCCTTTTCAGGGAACCCAGAATCCTTAAAGTCTGTCACCATATCCTCAAACAGTGAGACTCCCACACCCCTGACCAAGCCTAGAGCAAAATCATTATCTGCTATGGATGTGGAAAGGTGCACTAAGCCATGCAAAGACTCTCACAAGAAGAACTCTTTAAAGAAGTTGCTCAATATGAAGCTGTCCATCTGTTTCATGAAGAGTGACTTCCAGAAATTTTGGTCCAAGCATAGCCATCTTGGAGACACAACCTCAGGCAGCCTGGCAGGTGGGGAGCAAAGAGGGAGTGAGAGTGATTGGCATGGCCTGTTGGTAGGAGAAGAGAAGAGAAGTAAACCCATCAAGGCATATTCGGCAGATAACTATAGCCTGGAGTCCCACAAGAAGAGGAAGAAGTTGCGGGGCCACACCAATGCAGCTAATGGACCAAGAGCCGAGTCTCTGGATGACCAAATGCTGTCCAGGGAGTCGTCCTTGCAGGCACCTTGCAAATCTGTTACCAGCGACTGTGTACCAGAGTATGAAAATATACGGCATTATGAGGAAATACCAGAGTATGAGAACTTGCCCTTTGTTATGGCTATGGGGAAAACTCCCGAGTTGGAACGACGGAACTCCAGCAGCGTGGAGGACACTGATGCAAATGTGTATGAGGTACAGGAGCCGTATGAAGCTCCAGACGGCCAGCTCCAACTCGGACCCAGACACCAGCATTCCAGTTCTGGAGCATCCCAGGAGGGACAAAGTGATCTGGACCTTGGTCTTGGTGACCTTCCTTCAGATGAAGAGGAAGTCATCAACAGTTCAGATGAAGATGATGTCAGCTCTGCTTCTAGTAAAGGGGAGCCTGATCTGCTGGACGATAAACAGGGTGAAGATACTGGAATGAAATGTAAAGTCCATCATATTGCCAAAGAGATCATGAGCTCAGAAAAAGTGATTTCCGGGATGCAGTAGCCCATGCTTCCAGGCAACTTGGGAAACCAGTGATTGAGGACCGGATCCTAAACCAGATCCTGTACTACTTGCCTCAGCTGTATGAGCTCAATCGGGATCTCCTGAAGGAGCTGGAGGAAAGAATGTCAAACTGGACGGAACAACAAAGAATTGCTGATATCTTTGTAAAGAAGGGACCATATCTAAAAATGTATTCCACATACATCAAAGAATTTGATAAGAATATAGCTTTGTTGGATGAGCAGTGCAAGAAAAACCCAGGTTTTGCTGCTGTTGTTAGAGAATTTGAGATGAGCCCACGCTGTGCTAATCTGGCCCTCAAGCACTACCTGCTCAAGCCGGTTCAGAGGATTCCCCAGTACAGGCTGCTGCTAACAGATTATTTGAAAAATCTCTTAGAAGACTCTGGAGATTACAGAGACACTCAAGATGCCCTTGCTGTTGTTATAGAGGTAGCCAACCACGCCAATGACACCATGAAGCAAGGAGACAACTTCCAGAAACTTATGCAAATTCAGTACAGCTTAAATGGACACCATGAAATAGTTCAGCCTGGACGGGTTTTTCTCAAAGAAGGAATTCTGATGAAGCTATCTCGGAAAGTCATGCAGCCCCGAATGTTTTTCCTGGTCAGAAAACCCACCCAAGAAGCATATCAAAATGAACTTAAGATCGAAAGTGTAGAACGTTCCTTCATCCTCTCAGCCAGTTCTGCCCCAGAAAGGGATGAATGGCTCGAAGCCATTTCCAGGTCAATAGAAGAGTATGCCAAGAAAAGAATCACATTCTGTCCTAGTCGGAGTCTTGATGAGGCTGACTCAGAAGATAAAGACGAGGTTAGTCCTCTTGGATCTAAGGCTCCCATCTGGATTCCTGATACCAGGGCCACCATGTGTATGATCTGCACCAGTGAATTTACTCTCACCTGGAGACGACATCACTGCCGGGCCTGCGGAAAGATTGTATGCCAAGCTTGTTCATCAAATAAGTATGGCTTAGATTACCTGAAAAATCAACCAGCAAGAGTATGTGAACACTGTTTCCAAGAACTGCAGAAATTAGATCACCAGCACTCTCCTAAGTTTGGATCCCCTGGAAATCACAAATCTCCTTCCAGCGCCTTATCATCAGTCTTACATAGTATTCCATCAGGGAGGAAACAGAAAAAAATCCCAGCTGCTCTGAAAGAAGTATCAGCAAACACAGAAGATTCCTCTATGAGTGGCTACTTGTACAGATCAAAGGGCAATAAAAAACCTTGGAAACACTTGTGGTTTGTCATAAAAAATAAAGTACTGTATACATATGCTGCAAGTGAGGATGTGGCAGCTTTGGAGAGTCAACCTTTACTAGGATTCACAGTTACTCAAGTCAAAGATGAGAATTCAGAGTCTAGAGTGTTTCAGTTACTGCACAAAAACATGCTATTTTATGTATTCAAAGCAGATGACGCTCACTCAGCTCAGAAGTGGATAGAAGCATTTCAAGAAGGCACAATACTGTAGTTGCGTTGGTTTCGTCTCCTGTGGTTCCAAAAGGGTGGAATTTCATCAGAATAAATGCAGTACAAACATTTTATATAAATGAACAATGCCAAGATGAATCCAACTAAAATCTTCATCAGAGAGATTATTTTATTAGGTATAAGGTAATTTTTAAAAAATGTTTGTTTTTCATGTATGTTATTTATTAAAATTTTAATGTTTACTTAATGGTCAGAGTTATTTCTGAGACTCACACTGTATTCTGAAGTACCTTTTTTTTAGAAACCAGAACACTTACCTTAATACCGTATTAACTGTTTGTGACACGGTCCCTCCTGTTTTCTCAGTGTGTTTTACAATGTTACTTTGTAACATTCTCACCAGTGGTATGAATTTCTATACAGTCTTTGGGTTGGAAATTATGATTAAACAGCTGATGAGAAAAATGTATGTCTTTGAATCCATACATTTAGATGAATTTTTTTTATCTTTTAATGGAAAAACATATGGCCAATTTCTACCTCAGTAACTGAAACAAAATTCCAGTAAATTGTCTAAAGTATTTCTACTGTTACGTACCTCTTGTTCCATGAGATAATGTTATATATCATCAAGGAATTACTGCAAAGGGATAGAATCTGAATTTTCACTTAACTCAATTGTGAGTAGGAAAAAGAATGTTTCCATTTTCAGGGTTACACAAATAATTAACTCTATGGCCTTTACATTAAGTCTAATCTTTAAAAAAGAAAAAAAAAAAACTACCATTTCAACACAAACATAAATGTATTATTTCTTTGAAAAGCAAAATATGGCGAGTATATTATATAATGTTTCTTGCTCTTCTAGATGTTCTGAGCCCAAGGTAGTAGAGAGGTATTTGTATATAAAAAGAATGTTACATTTTCTATAATATTGTGATTTTTTTAAATGAACTGGAATTACCATATCAAAAAGCACATATTCTAAGCCAGTATTAGAAATTGTATAGTATTCATTTTTAAAAGATTTTTAAATACCACTTTGTGTTATGTCCTCTCTGGTAATTAAAGTATATATTTTTATATTTTCCTTTAAACAGCTGTCAGCATACCTCATTAGGAAGGACTTATATTCCTATTTTGGTTCATGTATTGTTTAACATATGAACTGCTTTATACATAAAATTGATGAGCAGAAGTAAAATTAAATTAACACTATGATTAAAGTCATTTCTGATGTTCATAATATAAATTTACTGACTGAGCTTAAATGAAATATAAAGTATCTTCAAAGGCAAGAAATTCCTTTGAATAAAAGGCTCAAGAAATTTCCCTTCTGCTGTTATATAAAGAATTTCCTAATGCAGTATTATCTCTGTGACTGCCAAGAGAATTGCCGAGCGCCTCCTGAAACCCTTAGAATGTTGGTTGCAGCACCAGGGTCTCTACATCTCGATTTTGACTGCTGTCATTTTCTGGCTATTACTTGCTGTGGAATCATTTTAAACCCTCTTGCAACCTCACATACAGTCCTTACATGTTAACTTCCAAGTCTTTCTGTTAGCTGTAGGTAAACTAACATTTCTTTGCATCTCATTAACTTTAACCAAGATAGCATAAATAAGGCTTCCACGTTAAAATCCCTGCAGTTTTTAGTGTGTCCTTTTTAGAGACCAAGGTCATGCCTTATGAAGTATTTCCCTTGGTTTCATAGGATCAGCATTTTGTAAAACAGGTTACTGGGGTTCCTCTCTCCTCCTCTTGAGCTTTCAACCTTCTGACTGCAAGGTTTGGTCTAATCGGAATCTGAAAATTATCAGCCAGTGGCTATTCTGTCTTTCCAACAGTTGGCTGAATCAAGAATCAGTTAAATATTTAAGAAACAGTGCACAGACTTCTGATAATTCTAATTACATGTGAAGCGCATGTATGATTATGCTAGTTGGCTTAGGCCCATGGAGGGCTTTGAAAAATATAAAATATGGTGCCTTTTGAGGAAGCTATCGGATTACCAGCCCCCCCCCCCCACCAGATGTTTTACATGTGAAATAGTATTACATTCCCTTTCTCCCTTATCAATCCTTCATAACTTCACTGAAGCTGATCAATTATTTAACCTTGCTCATTCAATGTCAAATGAAAAGCCTGATTATATATATTTTGTTATAAAGCTGTCAATACTTTTAAAACCACTCTTGAAGCTAACATTTTAGCAAAAAAAAAAAAAGATGTTGTATGCACTCTATAAATGAGAAGAAAGCATAAACAGTACTTAGATCCCAGTAGTGCTTAGTGTATTTTCTACATTGATATATGTGCTTCCATCAAATCCTTTTCAAGTGTCTCCTTTTATTCATAAGGAGAAAGAAGAGTAGTTATAAAGTTCAGTCCAAAAGGATGCTTAAGAAACCTAGACAAGAGATGCCAGGTCAAACTAGGGGAAGGCTGGCCTTAGTGTGTGTCTCTAGGCAGTGCTGCTCCCTTATCTGTGGCAGCTTTAAACATAGAGGACCCACCAGAGTCTAAGAAAATGAGAAAGTTTATCTTTGGTATTTCTGAACCTCTTCCCAACC EMBV3_16143 ATCACCCCATCCCCATCTCAACAAATCCCAGTCCCTGACTAACAGCCTCAGCACATCTGA Gene GeneID:100138309|SYN3:XM_002687672:52_cdna Constitutive 0 NULL GeneID:100138309 5 GENE SYN3 NULL synapsin III EMBV3_05905 GTGCCTGCTACCTCATGGGCATCATCACCAGCACCACTTACTCCATCCTCGTCTTTACTT Gene GeneID:520938|LOC520938:XM_002687423:171_cdna Constitutive 0 NULL GeneID:520938 5 GENE LOC520938 NULL similar to olfactory receptor Olr875 EMBV3_03416 GAGCAGCTGGAGAAGCTGCGCGGCTTCAAGACTATTTCACGGATCCAAGACTTCCCAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00189 TATACGCTGTCGACTGGAGTCCCGATGGCCAGAGAGTGGCCAGTGGTGGGAAGGACAAGT Gene GeneID:509793|NLE1:NM_001014887:227_cdna Constitutive 0 NULL GeneID:509793 19 GENE NLE1 FLJ10458 notchless homolog 1 (Drosophila) EMBV3_08798 AAGAACAATGCCGAAGGACTCCGGCCCGCTTCACATCTGGAACCTTGGCTGGCATCATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29410 CGGAGGTGCATTCTTAAAAGTCGAAATGCCTCATTTGGTTCTCCTAAAATCACAAGGAAG Variant GeneID:614469|ITGB3BP:NM_001079619:75_cdna 87^129 3 EMBV3_39310 GeneID:614469 3 GENE ITGB3BP NULL integrin beta 3 binding protein (beta3-endonexin) EMBV3_35352 ATCCAGCTCCACCCACCAGAACACAGATGCAAGCTTCCCTAACCAGAAAACCTTGAGAAG Gene BVV0102_004273 + 1 EMBV3_00543 GK000006.2:4152762-4364284 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023646 TCONS_00188225 TCONS_00071185 TCONS_00030202 TCONS_00167653 5 XLOC_014313 XLOC_114268 XLOC_042957 XLOC_016457 XLOC_102489 NonCoding TCONS_00023646 XLOC_014313 NonCoding NonCoding - 10:104108175-104109063 - TSS17536 888 3 TCONS_00023646_2 68 0.996621621621622 1 0 0 0 0 0 0 4.02821816122904e-07 0 0 0 0 0 4.29893868962395e-05 0 1.32431933609243e-06 2.02583360789158e-06 3.71784806495491e-06 0.00191013577704982 0.00122063614623734 0 3.50932343681453e-06 0 1.19380260028846e-06 0.000294436314721643 5.66374094866691e-05 0 9.91761517468598e-07 1.19499741920863e-05 4.44684141578623e-05 1.14804724406246e-05 1.12842431946245e-06 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 2e-22 111 68.22 0.402027027027027 0 noncoding GTTCCTCTTTATTGTGGAGGTTCCTCCTTGTGGGTGGGGTTGGATGAGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCAGTGTTCTGGTGGGTGGAGCTGGATCTCCTCTCTCTGGAGTGCAATTAAGTGTGCAGTAGTGAGTTTTGAGGTGTCTATGGGTTTGGTGTGATTTTTGGGCACCCCTATTTTAATGCTCAGGGTTATGTTCCTGCATTGTTGGAGAATTAGCTTGGTATGTCTTTCTCTGAAACTTGTTGGCTCTTGGGTAGAGCTTGGTTTCAGTGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCAACTGATGTTCCCTGGAGTCAGGAGTTTTCTGGAGTTCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGTCTCAAGACTTCTCTATCCATACAGCACTGATGATAAAACATCTAGGTTAATGGTGAAAAGATTCTCCACAGTGAGGGACACCCAGAGAGGTTCACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGGTGACCAGGAGGAGAAGAGGGGGAGTCAAAAGGAGAGAGACAGATCTAGCCAGTAATCAGTTCCCTAAATGTTCTCCACAGCCCAGAACACCCAAAAAGATTCACAGAGTTGGGTAGAGAAGAGAAGGGGGAGGGAGGAGATAAAGGTGACCTTGGGGAGAAAAAGGAGAGTCAAAAAGGGGGACAGAGCAATCAAGCCAGTAATCACACTCCTAAGTAAAAATGGGTACTGAAGATTGGATTCTTAAAGGTACAAAATTGATAACAAAAACCAAAAGGCAAAGATTAAAAATCTAGAGTAGAGGTTAGACTCTCAAAAATACAATATTAAA TCONS_00018597 . 5' 8990 TCONS_00018597 . 5' 8990 EMBV3_09711 TTCACGTAGAGCCCAACCCGAGGTGCCCCATGAAACGTGTCCTGTGTTTCCTGGTAGAAT Gene BVV0102_070868 + 0 NULL GK000018.2:12964268-12974879 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085450 TCONS_00085449 TCONS_00085451 TCONS_00085452 1 XLOC_051877 Coding TCONS_00085450 XLOC_051877 Coding Coding FBXO31 18:12970947-13009263 j TSS63814 3655 1 TCONS_00085450_4 354 9 0.904841445908913 0.00330132081645902 1.26188861154943e-10 0.000976542106047141 6.53182555932271e-06 0.000186774430445338 9.34444486278721e-05 0.00116332204917195 7.27701736488241e-21 6.4446952007845e-05 0.000355565598637207 0.0001239229654015 0.000783464541753094 0.0006111107918171 0.0012224732177441 2.90464942658042e-19 0.0009962000471067 0 0.00308823649985111 0.00184395722245519 0.00290545100034804 0.000498223799732243 3.65401482201176e-05 0.000275756301030488 0.000191552886928011 0.00138795573162767 0.00076004063273593 0.00067427784767714 0.000133651625999671 6.09072546854429e-05 0.000549997040435865 XM_591717.7 FBXO31 PREDICTED: Bos taurus F-box protein 31 (FBXO31), mRNA. 0.0 5568 100.00 0.844322845417237 NM_024735.4 FBXO31 Homo sapiens F-box protein 31 (FBXO31), transcript variant 1, mRNA. 0.0 1361 84.73 0.323666210670315 TCONS_00085450_4 sp|Q5XUX0|FBX31_HUMAN FBX31_HUMAN F-box only protein 31; 0.0 633 85.14 0.997175141242938 1 coding 0 0 1 0 -0.034188839120934 0.761404771071889 0.029718765990977 0.538405478057056 GCGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCCAGGTCTGCACCAAGTTCCGACGCATCCTGCACACTGACACCATCTGGAGGCGGCGCTGCCGGGAGGTGCTTCACCGATACAGACACATCCTGGGCTTGTGGCAGCCGGATATTGGGCCGTACGGAGGACTGCTGAACGTGGTGGTGGATGGCTTGTTCATCATTGGCTGGATGTACCTGCCGCCCCACGACCCTCACGTGGACGACCCCATGCGGTTCAAGCCCCTGTTCCGAATCCACCTGATGGAGAGGAAGTCGGCCACGGTGGAGTGCATGTACGGCCACAGAGGGCCCCACAACGGCCATGTCCAGATCGTGAAGAAGGACGAGTTCTCCACCAAGTGCAACCAGACGGACCACCACAGGATGTCTGGCGGGCGGCAGGAGGAATTCCGCACGTGGCTAAGGGAGGAGTGGGGCCGGACGCTGGAGGACATTTTCCACGAGCACATGCAGGAGCTCATCCTGATGAAGTTCATCTACACCAGTCAGTACGACAACTGCCTGACCTACCGCCGCATCTACCTCCCACCCAGCCGCCCGGATGACCTCATCAGGCCAGGCCTCTTCAAGGGCACCTATGGCAGCCACGGCCTGGAGATCGTCATGCTCAGCTTCCATGGGAAGCATGCCAGGGGCACGAAGATCACGGGTGACCCCAACATCCCTGCCGGGCAGCAGACAGTAGAGATTGACCTCAGGCACCGCATCCAGCTGCCTGATGCCGAGAGCCTGCACGACTTCAACGAGCTCTCCCGCGTTGTCCTGGAGGTGCGTGAGCAGGTGCGCAAGGAGCAGGAGCAGGAGCAGGAGGGCGGGCCCGAGGACGCCGAGGGCCTCGGCCAGCAGAGCCCCCAGCCCCGCGAGGAGCCGCCCGCTGAGCCGGCCCAGGCACCTGGAGACGGAGGGGCCGCGGCCGTGGCTGAGCCACCTGCCCAGTCGGGGCAGCCGTTCGTGTTGCCAGTGGGCGTGAGCTCGAGGAATGAGGACTATCCCCGGACCTGCAGGATGTGTTTCTACGGCACCGGCCTCATCGCCGGCCACGGCTTCACCAGCCCTGAGCGCACCCCCGGGGTCTTTGTCCTATTTGATGAGGACCGCTTCGGGTTCATCTGGCTGGAGCTGAAGTCCTTCAGCCTGTACAGCAGGGTCCAGGCTGCCTTCCGGAACGCAGACGCCCCGTCCCCACAGGCCTTCGAGGAGATGCTCAAGAACATCCAGTCCCTCACCTCCTGACAGTCCACCTCCCCACGGCGGGCGGCTCAGGGCTGGGAGGGCAGCAGCATGCGCTCGGGGGGACTCGGCCAACACCCGACACCCCCCTGCTCGCAGGAGCCTCTGCGCGGCCGCCCAGATGCTTTCCACGGAGCGCACGGCACACCTGCATATCCGCCAGTAGCAACAGGAGGGCTGAGCATGTCTTGAAAAAAACAACAGAACCAGAACAAACAGACCTGGAGGATGGGCCGCGGGGTATGTAGGGACTGAACTGGAGAGACTGGCCGTTTTCTAGGGAGAACACAGTCCTCCTCCAGGGAGGGTCACTCCGCATGCACGGGGGTCTGCTGCCTCCAGCTCATGGAAGGAGTCCTGGGGGAGGCATGTTGGCTCCACCATCCCCTCTGCGGGGAGCAAGCCGGAGGGCCACGGTGGCTTCCACGCAGCCTGGGCGGGTGGGGGTGCTGTGTGCGGAATAGGAGCTCCGGGGAGACGGGGTGGGGCTCAAGACCCACTTCTCCACCTATCTGCTTGGATTTGGGACAAGTGCACGTCACTCCGATCTCAGTTTCCAAGATCAGTGAATGGGGCCGGTGATCCGGGTCATGAGGAGATGCCCACTGCAGGCCATCCGGCAGCTCGGTGGCCCTGGTCCAGCACCACCTGGCCCTGCTCCCCGCAGCACAGGGTGCCTGCCCAGCCTCTCTCAGGTTTAGAACCGAGACCTGTGCTGCAGCTGTTCTGACAGGCAGTCACTGAGCGCCCTCCCTGCTCCCCCACCCCACACTCACTGATGTGAGACCGTGAGTTGCAGCTGCCGGTCTCAGAACCAGGACAGGGCCCCTTGGAGATGACCCACGTCTGCTCCCCTGCGTGGTTTACGAGATGCCACTCTTGAAAGGGGCGGAACATTGGGAGGGGTCGTGCCGGGTGTTTGATGCCCCTCTGCAGGGGAGAGGGCAGCTTTCTGGAAGTGTCAGGGGACCAGGCCCCTCCAGCGTGGAGAACCCGGGCGCTGACCCTTCTGCTGGCGCTGTCCCCATTGTTTTGTTGACCCCTGCATTTGGGAACCCCCACGAGGCCTGATCTTGCCATCCCCTGAAGAACGGAGCCCCGTGTGCCTGGGCACAGACCTGCTGGAGTTATGCTCAGCCCTCCCTCCAGTCCTCAGAGCATCACCGCACCTGCCTGCCAGGGCCAGTGGCTCCCCGGGGTGGACAGACTCTGTTGCGACCCAGCTTCTTGTCCTCATTGGGTGGACTGCGCTGAGCCCTCACTCTGGGTGCCCCAGGGAGTGGGCAGCTCTGTGGTGCCTTCACGTAGAGCCCAACCCGAGGTGCCCCATGAAACGTGTCCTGTGTTTCCTGGTAGAATTCTTCCTGACTGGCCCTTTTCTCAAATAACTTCAGTCTCCGCTTCAGTCCATTTGGCTACTTGGGCCTTCCTTCCTTTGCTGCCCAGAAGCAACAAGCTCTGGGCATGGCCCTGAAATGCAAACTAACCCTCCCAGGACCAGGACTCTGTGGGGTCCACCCTGGGCCATCACCGGGCACCGTCAGCCGAGTCTCATCAGTGACACCACCTCACACCTCCTAGATCCTTCCAGCAGGACCCGCAGTCGGGTAGGGACGTGGTTTCAGTTCCTGTATCTCTCGCAGGACTGAGCCTCAAAGCCTGTTGCCCTCCCCATCTCACAGCGCGGCTGTTCTTCTCTTGTGCCAAGCGTGGCTGTCCCCGATGGTGCAGCCACAAAGCCTTGAGGACAGTGAAAACGGAGGACAGCTGGGCGCTAGGCTGTTCCTCTCTAGGTTTCACCACTGTTTAAATAAAATCAAGAAAATGCGTGTTTTACCCAGAGCTAAGGGACTGTCTCCGTCTGAGGCCCCCAGCATTGTAAAGATGAGCATTTCTGATTAAAAACCAATCCCAAACTAAATGCTATCCTGCCTCTAGTGTCTGGCCTACGCATGGTTGCCACTAACACAGGCCAGCCTTCCGGGGCCCAGGGTCACCAGCAGTGACACCTGATGCTCCAGCAGAAAAGTAGCCTTCTTCTGGGTCCTTTCTGCGCCTGCAGGGAGACCTGCCAGAACACGCGAAGGGATGAGAACCCTTTGCTTTTTTTTTTTTCTTTTTAGTCTAATTCTAATTTTGGTTGTGGTTTGAGATCATGAAGCCTGCTTGGAGAAGAAAAACATTCATCCTGTTTGATCTTGAAACCCCACCCCCCGAGTGATGAAGACAACAGTTGAGATGGAGGCTGTGATCACTCTCAGGCATCTGCTCGGGCTTGCCGGGTGGGGCAGGGTCAGGACCCCAGGAAGGTCTGACTTGTGACCTGGACTCAACAACCTTGGGGTGTTGTTTCTCCATAAAGCAGCTTTTGAAA EMBV3_41815 AATTGCTTCGCGCTGGTGAATAGCTCTGTCTCTGAAGGCATGTCAGCCGCAATTCTGGAG Gene GeneID:516510|GLT1D1:XM_002694461:77_cdna Constitutive 0 NULL GeneID:516510 17 GENE GLT1D1 NULL glycosyltransferase 1 domain containing 1 EMBV3_39360 CCATCAGTAAGCAAAGGGAAGCTATTGTAGGCAGATGACTCACAGGGTCTTCAGATGGCC Gene GeneID:533823|ARHGEF6:XM_002699590:86_cdna Constitutive 0 NULL GeneID:533823 X GENE ARHGEF6 NULL Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 EMBV3_36042 GAAGATCAGCAATATCAGTGGCTGGAAAAGTTCTGAGTTACTGTCAAGTATGGAGAATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08395 CCCTAGTGAAAGGCCTTAGATGTGCCAGCAGATGCAGTTACTTCTAGTATAATTACACTG Gene GeneID:789989|ZNF211:XM_002695445:90_cdna Constitutive 1 NULL GeneID:789989 18 GENE ZNF211 NULL zinc finger protein 211 EMBV3_41074 CCTGCTCGACTGAAAACAATCTTCTCTTTGAAAACCCCTTTTACTCATGGCCCACGGTAG Gene GeneID:614310|SFRS4:NM_001101231:269_cdna Constitutive 0 NULL GeneID:614310 2 GENE SFRS4 NULL splicing factor, arginine/serine-rich 4 EMBV3_34925 CTGGGTTCCCTGTGCTCCATGTGTATCTGTCTCCCGATGTTCTACTCACTGGGTGGTTAA Gene GeneID:100138303|ARHGEF10:XR_084089:8_cdna Constitutive 0 NULL GeneID:100138303 27 PSEUDO ARHGEF10 NULL Rho guanine nucleotide exchange factor (GEF) 10 EMBV3_24067 CAAGCCTGAGTCACTGTTGAAGAAAGAAGATCAATACAGAAGGGGTGTCCCTGGTGACAG Gene BVT0101_009822 + 1 EMBV3_31542 GK000002.2:121712374-121714033 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106448 TCONS_00106450 TCONS_00106449 TCONS_00106447 TCONS_00106451 1 XLOC_062803 Coding TCONS_00106451 XLOC_062803 Coding Coding KIAA1522 2:121712725-121740860 = TSS78353 5384 1 TCONS_00106451_7 1077 7 0.808878936518092 6.46196656911713e-05 0.000231451414266418 0.000540039622487602 0.00014799334867299 0.000262426452750269 0.000253180087343042 0.000229624918308674 5.10444791778846e-05 2.40580520054687e-05 9.09347029080039e-05 6.73052834028568e-06 2.94557365791778e-81 4.39663738934311e-05 2.28763425139363e-05 3.27446511233413e-05 3.64354794870338e-07 1.49696852231223e-09 9.049350547179e-23 0.000266380063857371 0.0010283750284182 7.66401025896298e-05 6.01224399902962e-10 1.64812678557791e-15 0.000182781824888494 0.000452255829166135 0.000445359241444418 7.65048313014709e-05 1.19869615586121e-71 4.59752092447147e-05 2.69693591881284e-99 XM_002685609.3 KIAA1522 PREDICTED: Bos taurus KIAA1522 ortholog (KIAA1522), transcript 0.0 9708 100.00 0.99962852897474 NM_020888.2 KIAA1522 Homo sapiens KIAA1522 (KIAA1522), transcript variant 1, mRNA. 0.0 4466 84.59 0.742570579494799 TCONS_00106451_7 sp|Q9P206|K1522_HUMAN K1522_HUMAN Uncharacterized protein KIAA1522; 0.0 1197 83.87 0.929433611884865 1 coding 0 0 0 0 -0.322650500204188 0.132265544681546 0.0145724548964476 0.775095718695203 ATGGCGGCCCGCGCGTCCCCCGCCGCACCTGCGGCCGACAAGCCGGGGGGCCCCGGCGGCCCCCCGCGCAAGAAGAAGTCTCGCTCGGGCGCGTCCGGCCTCCGCCGCGCCTTCAGCTGGCTGCGGGGCAAGCGGCGCAAGAAGAAGGCGGCGGGGGCCGAGGGCGCCGAGCCGGCCGCCCCCCGGGCCAAGAAGGCGGACGACAAGGCCAGGAAGGCCAAGGGTAAGGGCCGAGGCTCTGCCAAGGCTGAGAGCGACAAACGACTGAGTGTGGGGCCTGGCCAGGGGCCAGGGTCTGTAGTGGACGACCACCAGGACAATGTCTTCTTCCCCACTGGGCGACCGCCTCACCTGGAAGAGTTACACACGCAGGCCCAGGAGGGGCTCCGTTCCCTCCAGCAGCAAGAAAAACAGAAACTGAACAAGAGTGCCTGGGACCATGGAGACACCCAGAGCTTACAGTCTTCCCGCACTGGGCCAGATGATGATAGCATCTCCTTCTGCAGCCAGACCACGTCCTACACAGCTGAGAGCTCCACGGCAGAGGACGCGCTCTCCATCCGCTCTGAGATGATCCAGCGCAAAGGCTCCACCTTCCGGCCCCACGACTCGTTTCCCAAACCATCTGGAAAGTCGGGGCGCCGGCGGCGGGAGCGGCGGAGCACGGTGCTGGGACTGCCGCAGCACGTGCAAAAGGAACTCGGCCTGCGGAATGAACGTGAGCCACCAGGTACGCCTCGGCCTCCGGGTCCACGGGACGCTGTACGCATTCCCACAGTGGATGGCCGTCCGGCAGGCCCGGCCGCGGGGCCGGGGGCCAGGGTGTCCCTGCAGGCGCTGGAGGCAGAGGCCGAAGCTGGGGCCGAGGCCCTGCTGCAGCGCCACATCGACCGCATCTACCGCGATGACACGCTCTTCGGCCGGTCCACGGGGGCGCGGCCCCCGCCGCTAATCCGGCCCATGTCCCTCGCAGTGCCCGGACTGACGGGAGGGGCCGGGCCTCCAGAACCCCTGAGCCCGGCCATGTCCATCTCGCCCCAGGCCACCTACTTGTCGAAGCTGATCCCACACGCCGTGCTGCCACCCACCGTGGACGTGGTGGCCCTGGGCCGCTGCAGCTTGCGCACCCTGAGCCGCTGCAGCCTGCTCTCAGCCAGCCCAGCCTCCGTCCGCTCTCTGGGCCGCTTCTCCTCGGTCTCCAGCCCGCGACCCCGAAGCCGCCACCCTTCCTCCTCCAGCGACACCTGGAGCCATTCTCAGTCCTCCGAGACCATTGTGTCTGATGGCTCCACCCTCTCCTCTAAGGGTGGCTCTGAGGGCCGGCCAGAGGGCTCCGTGGCCAACAGTAGCGTGGCGCCCCCTCCGCAGGGAGGCAGCGGGCGGGGCTCTCCCAGCGGGGGCAGCACCGCTGAAGCCTCGGACACTGTCAGCATTCGGAGCGGGGGCCAGTTGTCAGGCCGGAGCGTGTCCCTACGTAAGCTGAAGCGGCCCCCTCCGCCTCCCCGCCGGACCCACTCGCTCCATCAGCGCAGCTCGGCGGTCCCTGATGGGCCTTTGGGGCTGCCTCCCAAGCCAGAGCGGAAGCAGCAGCTGCAGCCGCCCCGGCCGCCCACCACTGGAGGGTCGGAAGGGATGGCGGCCCCGCACTGTCCACCCAGCTCGGCAGGCGGCTGGGTGTCTGGCTTGTCTCCGGGTGGCTCCCGGCGCCCCCCACGTTCCCCGGAACGGACACTCTCACCCTCCAGTGGATACTCAAGCCAAAGTGGTACCCCTACCCTCCCCCCCAAGGGTCTAGCAGGGGCCCCTGCTTCCCCAGGCAAGGCCCAGCCCCCCAAACCAGAACGTGTCACTTCCCTTCGATCTCCCGGGGCCTCCGTCTCCTCCTCCCTCACTTCTCTGTGTTCCTCTTCCTCTGATCCAGCACCTTCAGACCGCTCTGGTCCTCACATGTCGACTGCCCTGGGCGACAGGTTTGTCATACCTCCTCACCCCAAGGTGGCTGCCCCCTTCTCCCCACCTCCCTCTAAGCCCAAGAGTCCAAACCAAGCTGCCCTTGCTCCTGCTGTAGTCCCTGGGCCTGTCTCTACCACTGCTGCCAGTCCTGAGTCCCCACCCACTCCCCAGACATCCCTGACCCCACCTCAGGCATCTCCTGCTGCCTCCAAAGACCAGTCACCCCCTCCGTCCCCACCCCCATCATATCACCCACCCCCACCCCCCACTAAGAAGCCAGAGGTGGTTGAGGGGGCCCTGTCTGCCCCAGAGACCGCTGAGGAGCTCCTCCAAGATCCCAACTGGCCCCCTCCCCCGCCTCCTACCCCAGAGGAGCAGGACCTGTCCATGGCCGACTTCCCACCACCCGAGGAAGCCTTTTTCTCTGTGGCTAGCCCTGAGCCCGCAGGCCCTTCACCCCTCCCAGAGGCCTCCTTACCTGCTGTTTCCTTCCAGAACCAGCCCTCTGGTACCCCAGACCCTCCTCCCGCCCCGCCCGCCCCACCTGCTGCCGGCTCTGTCGCAGGGCTTCTGGCCAAGGCCCCTCGGAAGGAGCCAGTGGGCTGCAGCAAGGGTGGGGGCCTTCCCCGGGAGGATGCCAGTGCGCCCCTGGTCACACCCTCACTCCTGCAGACGGTTCGGCTGCGCTCTGTGGGCGCTCCCACAGTGACTCCAAATCCAGCATCGGGGCCATCACCCCCCCAGAAGCCACTCCGAAGGGCCCTGTCAGGGCGGGCTAGTCCTGCGTCTGCCGCCTCCTCAGGGCTCCATGCAGCTGTTCGGCTCAAGGCCTCTAACCTGGTTGTCAGCACAGGCCCTCTGGGTGCCCAGCCCAATGGACCACCTGAGGCAGAGCCACGGTCCCCTGCCTCTACGGCCAGCTTCATCTTCTCCAAGGGCACTAAGAAGCTGCAGCTGGAGCGGCCTGTGTCCCCGGAGACCCAGGCTGACCTCCAGCGGAACCTGGTAGCTGAACTAAGGAGCATCTCAGAGCAACGGCCACCCCAGGCCCCAAAGAAGACACCTAAGGCCCCCCCGCCTGTGGCTCGCAAGCCTTCTGGGGGCATTCCCCTTCCCACCTCCCCCAGCTTCCCTCGAGCTGAGCCCCTTACTGCGCCTCCCACCAACGGGCTCCCCCATGCCGAGGACAGGACTAAGGAGGAGCTGGCAGAGAATGGAAGTGTCTTGCAGCTGGTGGGCCCGGACGAGCAGAAGCTGGGCCCGCCTAGTACAGACGCATAGAAAGAGCTGGTCTGACCACCAGACACCTCGCTGGTACTGCTGACCCATCCCAGGAATACATTCTCAGGGACCTGAGCGGCTCCGAGGATGAGAGGATACGGCAGACACTTAACCTAATGGGGGGACGCCTGCAGCCTTAACCTCCACGGCCTTCGGTATTTATGCAAGCCTGTGTGGATCCTGTCCTCCAAGTCACCCAGCTCTCATGCCTTTTCCTGAATGGACTCACCTCTGGCAGCTGCTGCTTCAGTCTTGGCCTTAGCCTCATCTTGGAGGAGGTAGCTGGTGGGAGTGGATGTCAGCGCCCCCTGCTGGCCTCAAGGCCACAAAGATGGAGGACCACAGCACCTCTTTTTCTTTTTGTTCATATCCAAATCATGCACATGCTGTAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGTCCATTCCCCAGGGCCCGTGAAGCCACATTCCAAGGGCCTGTTTACATGGCAGCAGCATCAGTCCCCAGCAGCCAGCCCTTGGCTGGGACTAACCTGTCCCCCTCTCCTCTGATCCAGTTTGCTCCTTTTCTTAGTTCTTGGAGGTAGGCAAGTCGTATTCCCACAGGCTTCTCCAGGCTGGAGGCAGGCTTGGGGCTGTGGCATTCCAAAGCACAAAAGGTGCAGCGGGGGTTAGTCCCCCTGTGCCTCAACTTACCACCAACCAGCTTCCTGCCTTCTAGTTCTGCCAGGTGCTTCATGCAGGGGACAGGAAGTGGGAGCCTGTCAAGGTCCAAATGGGTGGTGGAGAACACCAGAGGGGAGGTTCACAGGCTCACCCTGCCCTCCGAGAACAGAGCAGGGAGTCATGTCATGGGTCACTTGGCCCCATTTCACTTGACCAGGTTGGGGTGCGCGAGCATGACTCTTTAGAGGCAGGAGCCCATGGGCCATGGCAGAGCTGGGTCCCTTTCAGCTTGGCAGGAAGTACTGAGGACGTGGATGAAAGGGTGGGGCTGGGGCTGGCAGGGAAGAGCTTCTTTGGGCAGTGGGCTGGGACCTGGCCCTGTGGATTTCATCCTGACCTTCCTTTGCTCTGTGCATGTCCTTTCTGCAGCTGCCTGTTAGTGCAGGTGGTTCCACTGGGGGAGGGTGCTGACGCTGAGTGACAGGATGGGAAGCCAAGGGTGCATTCTATTCCAGACTTTTCCCTAGTCAAAGAGGGGGCACTTGATGCTCCTAGGGGCAGGCTGGGTGGTTCCCCCCCGCCGTAGATGTCAGTCTCTTGCTACTGATCTCTCCAGGAATCTTAGCGATTTTTCCATTTTCAACCAGTGCCACCTATGTTGGTAAGCTAGTTTCCTCCAAGGTTCCATGGGGGTGACCCTAGTGCTTCCTCCCGCTGCAGGGTGGCTGTCACCAGGGTCACCCCTTCTGTATTGATCTTCTTTCTTCAACAGTGACTCAGGCTTGAGCTGGACAAGGAACCTTTTTAGCTGCTTCTCCTCCACCCAGGAGACAGGTTGACCCTCTCCCAGAACAAGAGCTGGGAACACAGGGGATGTCGTTGGAGAGCCCAGGTTCCTCTGGCCTTCTCCACCATCTTCTCTTCAGCTATAAACCAGTGTTCTTCCGTGCCCGCTGGGTATGTGTTGTCCCTGCCCGGTAAGATGGGGAAGACAGTCGGTAAACCAGCTCTGCTCAGAGCTCTTGACCAATCTCCTGGGAATGGGGGACTAGGACCAGGCCAAAGCTTCCATGACATCAAGCCTAGGCAGCAGCCACAGAGCTGCTGGAGCTGAGAGGGAGCCCACCTTCTGTCTCTTTGCCTCCCCTCTCTCTGTTACTCCTTATCTTCAGTTAGTCCTCTGAGCTTGTTTCCCCACTGGGTGGGACAGAGTTGAAAGGAGAAGGGAGGATCTCCCAAGAGGCAATCCTTCTTTGTCCTCTGGGGTAAATGAACTTGACCTAGTGCACATGGAGACCAAAAGCCTCTGATTTTTAATTTCCATAAAAATGTTAGAGAGAGAAGTATATATATATATATATATATTTCTTTAAATTTTTGAGTCTTTGATATGTCTATACAATCTGTTCCCTCTGCCCTGAAGCCGGAGTGAGACACATGGAAAAACTCTGTGTGGATTTCATTCGAAGGTGTTAATTAAATGATTAAAACTTGG EMBV3_00361 ATTCCCAGTTAAGCAGGCTTTGCAAAGACATTTTGAACAGCACCAGGAGACGTGCCAGGG Variant GeneID:537500|PRDM5:XM_002688026:8_cdna 651^743 2 EMBV3_28312 GeneID:537500 6 GENE PRDM5 NULL PR domain containing 5 EMBV3_07538 GCATTGATCCTATTAATGGTGAAATAAAGCTTTCTGGTGGTAGGAATTCAGGAACTCTGG Gene BVT0101_007399 + 0 NULL GK000007.2:33101647-33128489 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216384 TCONS_00216385 TCONS_00216382 TCONS_00216383 TCONS_00216381 TCONS_00216386 TCONS_00216380 1 XLOC_131227 Coding TCONS_00216385 XLOC_131227 Coding Coding SRFBP1 7:33125964-33188767 j TSS161408 3923 1 TCONS_00216385_3 374 0.267652306907979 6 0.937629374860673 0.000398098600662105 0.000352992002049684 0.000312307107884869 0.000141830280638989 0.00030265938294157 4.65220597542659e-27 0.000396591902664352 8.02706103082237e-05 0.000671893386007081 3.71541233671653e-21 4.41871759188466e-13 2.87418932846456e-13 8.53834402463955e-12 1.60298528994412e-11 0.00015171604452016 6.84029131384787e-32 2.11213646975687e-41 5.38764724857933e-19 0.000275715173460866 0.000223186053586614 1.14933353878611e-10 7.17284409465971e-12 4.93284225469761e-14 1.14098675200011e-45 0.000476499128219926 0.000340762871664039 1.48771057246886e-15 1.28967942700986e-11 3.56229727304182e-11 1.18954305475797e-15 NM_001105449.1 SRFBP1 Bos taurus serum response factor binding protein 1 (SRFBP1), mRNA. 0.0 2140 100.00 0.302064746367576 NM_152546.2 SRFBP1 Homo sapiens serum response factor binding protein 1 (SRFBP1), 0.0 1196 83.61 0.286770328829977 TCONS_00216385_3 sp|Q05B65|SRFB1_BOVIN SRFB1_BOVIN Serum response factor-binding protein 1; 0.0 737 100.00 0.96524064171123 1 coding 0 0 0 0 0.00777437522510382 0.986319204491189 0.0478059113881317 0.409856296411154 TTCGTCACTTCCGCTCCTCCCCTCAAAGTCAGTATACCTTTTACTTACGCGTCTGCTTGAGCAGAAGGCGGATGCATTTTGGGCCACTGAGGCCGCCGTTGGGGGCGTGAGGACGCATCCGCGTTCCGGCAGCTACAGTTCACATGCGGCAGCAGCGGATCTTCTGCTAAGAGCTACCATGGCCGAGCCGGAGACTTTGAACCTCAATAATGAGGAGTTGAAACCTGATGTAGTAACTAAATCTGCTCTTGGTGAAGATATCAACTTTGAAAAAATCTGCAAAAAGCCTGATTCGACTGCTGCTGAAAGAGCAATTGCTAGACTAGCAGTGCACCCTCTTCTGAAGAAAAAAATAGATGTGCTGAAAGCTGCTGTCAAATCCTTTAAAGATGCAAGACAAAATGTTGTTGAAGTTAAGTCATCAAACAGTGCTTCAGAAGAAAATCATTCCAAGGACACTTTGTGTTCAAATGATGATGCCAGCAAGTTACAGCATGAAGGAACTATTATCCGTGAACAAAAAGAGAAGGAAGCCAAAATATTGGCAAAGAAACCGATAAATAATTCAAAAGAAAAAATAGCCAAGATGGATCATGGACCCAAAGCAATGGATGTCCCAAATTCTCTATCAAAGCCTTCCGGAAAAGATTCTCCAGCTTCCTCAGCATCCCAGAAGACACCTTCTGACCCCAAAATGAAAGCATTAAGTAAAACCAAAAAAATGAAAGAGTCCAGTAGCTCACTTGATGTTGACAGTGATGGAGAAGAATTATATGAAGAAGAGAAGGAATATTTTGATGATAGCACAGAAGAAAGGTTTTACAAACAGTCTTCCATGTCTGAGGATAGTGATAGTGGTGATGACTTCTTCATTGGGAAAGTCAAACGGGCACGAAAGAAGGAAAGTAGTTGTCGTTTTTCAGATAAGGAACAAAACCCCCCCAAAAACTTGTTGCTTGAAGAAGGTATACTTGAAACCCATCAAAATTTACAAAATGATAAAAACAAGCCACGTACAGAGGCAAGGAGGTTTGAATCAGTGTTTTTCCAGTCTTTATCTGGATCTAAGAGCCTTGAAAGAAATCACAGAGAACAGGTTCCAAGAAGCAAAACCATGGATTTTCAGCACATTGAACCTCAGAACAAGAATCAGTTTAATAAGAAAGCACAAAGAGGATTTGAAAATACAAAACAGAAATCACAGCTGCCTCTTCATCCTTCATGGGAAGCAAGCCGGCGGCGAAAAGAACAGCAATCCAAAATTGCTGTGTTTCAGGGGAAAAAAATTACTTTTGATGATTGATCAGTACTATATTTTTGTTAACTTCTCTGTCTAAATTTGATTTTCTTCTTATTTTTTAAACTAGCTCATTATTAAAATATATATTTAAGTAAGTCTCTGAATGGGTTATAGAAATGAGTTGATTTTGTCTTTATTTTTTTACGTGTGTTCATGTACGTTTAAGCTTCTGTTGATCAAGTACATACTTAATTTTAAATATGTCTAGACTGCTGTCCCTCTATAAAAGAATTTTGAGATGATAGCTATCTCACATTTTCTCATTTGGTTTTATCACGAAGTGTATTTCACTAGGTCAGCTCTGTGTTTCGTTACTTTGAAAATAAATGTTGAGTGATATTTGAAATAATAATGCAAAAATATGAGGAAAGTGTAGCTATTTAAAACAGACTATTTTTACTGGAAGATACTCTTGTTAGCAAAACTAAGATGATAACTTTTATTATGGGTATACAGATAATAAGTTATATAAGTAAATATTAGTTTTTATTATAGTTTTAATTATTTGTAATTTTTTAGTTTTTGACTGTTTAAAATAGTTTCCAAGGAAATTTTTGGATTTCTGAATTATGTTTAGTTATTTGGGCAGCATTCATGTTCAAATGTTGGCAACCAACCAAAAATTGGTTTTACTGCATATAAAATTTGTGTAAAATCATAAATATATAACATACTAGACATGTGTTCTTTATAGAAACAGTTTTTGAGGAATCATAGGTTTGGAATTTACAAGAGCAAATTCTGAAGGAGATATAATTACAGAAGCATTTTCACTGATAGCTAAGCAGAGGTTATAACTCACTGAAGATGGGACTGCTTTATATTTCATAGTACTGTTATTTAAAGGGAAAACAGAATTTTAAAAATCCCTTCAAATGTTTCACTTCTTGCTACTGGGAGAAATTCAAGTTCTTGGTTAACTAAGTAATGCTAACTAAATTCTATGTTTTTATGCATTGATCCTATTAATGATGAAATAAAGCTTTCTGGTGGTAGGAATTCAGGAACTCTGGAAAGTCATTTTTATCTTTTTCAAATGCTTAAAGAGTTTAGATAACTAAAGCAGTAGAATTCAAGAGGTTATACGGAAATAAAATTATTTTTGCTGTGTTAAATGCAAAATTTGTTTTTTCTTTTAAGTTTGTTTACAGTTACATACAAAATTATGTCACATTGAAATTAATTTGAATTGAAAGTTTAATTATGAAAAACGACTCTAAGAAAGTTGAAAAATAATGTTTCTGTCCCTACCCAGATTTAGCTAAACCATGAGGTTGAGCGCACTATTCATCGACCCAACACTTCTAACCCTAACTTCAAGGAGTTAGGGTTTGACTACAAAGTTAGAAGAAAGAAGCCACACAAGACTGCTCACTTCTGACACCAACTGCAGGTTTGGAAATTGCAGGGGAGGGCTCCCCAAATACTGTCAGATTCAAACATGTGCTTGCAGAACTCACTAAAACCTATTATATTCCTAGTTACAGTTCATTATACAGTTCAGTGACTGAACAACAACAGATAGTTCATTACAAGTAAAGAGTACAGATTATAACCAGCCAAGGGAAGAGATGCATAGGGCAAAGTCCATGAGGGTTCTAAAAGCAATGTTTCTGTTGTCCTCAAGTTGCATTACCATGGTTGCATCAATATGTACAGTGTTGCCAATCTGAAAAGCTCACTGGAGTTTTAGTGTCCAGAGTTTTTATTGTATCTTTCATATATAGACATGCTCAGTTGATTGCCCATGTGATGGTTTCAGATAGATTGATAATATCATATGACCCGAAGGCTCATCCTAAATGAGGTCTTTTGTAGTGCAGCCAACCCCTGCTCTAAACAAGGACACTCCTATCAGGTATGACATAGAGTGCCTCAAGAAGCTGAAGGCAAAGGCCATTTCTCTCTTTGGGCAAGGCCAGGTTCTTTACTGCACAGCATCCGTCACCCGAATTCCCCCAATATTAACATTTTTCTGTATCTACTTTATCTTTGGCTCTCATACTCCCTTCTCTCCTCCTTTTTTCCTCCCTTTTCCCCTTTCTCTCCTTCCTTTTTTATAATCTTTATCCCTTCATCTCTCTTTTCCTCATTTTATCCCTGTCTCCCTCTCCATCTGCTCTCTTCCTCTCATCCTTTTACCATTTCTTCTTTTTCTCTATGCTGTTTACAGCCTCTCTCTAAAAACAAAGTCATTCTTTGTTCTTTTGTATTACCACACTTCAGTTATCAAATGTTAAGATTTTGCCAATTGTCCCAGTGTCTTTTTATGGCAACAGAAAAATCCAGCATCAAGCCTTACATCCAGTTGTCACCTTACATTCAGTTATCTCTCTTTGGTTGGAAAAAGTACCTCAGTCTGTCTTAAGATTTCATGACATTGACCTTTTTCAAAAATGCACATCAGTTATTTTGCAGTGTGCTTTTATTTGGGTTTGTCTAATATTCACATTTTCATGTTCAAGTTATGTACTTTTGGCAGGAATGTTGCAGAAAGAATGTTGCATTTGTCCTGTTGCATCATATCTGAGGTTAGGTGATGATGTTGATATGGCTGGGCCTTTACTGGTGATGTTAACTCTGCTTACTTGTTTTAAGTGGTATTTATATGGTTTTTCCACTG EMBV3_32392 CCGGCTCCAGCCTATTTCCCTGACTAAGGAGGTTGTGTTTTTGTTGAGGTCCCAGCGGGA Gene GeneID:523726|MIER2:NM_001099026:71_cdna Constitutive 0 NULL GeneID:523726 7 GENE MIER2 MGC157251 mesoderm induction early response 1, family member 2 EMBV3_28664 CCATGGAGTCCAACCTTCCCACATCCCCACTTCTAAGAAACTTTTGTCAAACCCAGTAGG Gene GeneID:509290|PPP2R2B:NM_001014879:34_cdna Constitutive 1 NULL GeneID:509290 7 GENE PPP2R2B MGC139491 protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform EMBV3_35567 AGTGCCCTGCAGATTCACGAGAGAACTCACACTGGAGAGAAACCCTTTGCTTGCACTATT Gene GeneID:514467|SALL1:XM_002694776:571_cdna Constitutive 0 NULL GeneID:514467 18 GENE SALL1 NULL sal-like 1 (Drosophila) EMBV3_23833 AATCCTCGGCCTCGGACTAACCCGGAACTCCATGGTATCTATGTAATCAATGTGCAGTGC Gene BVV0102_349086 + 0 NULL GK000010.2:86692506-86702094 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018303 TCONS_00018301 TCONS_00018302 TCONS_00018299 TCONS_00018305 TCONS_00018300 TCONS_00018304 1 XLOC_009218 Coding TCONS_00018305 XLOC_009218 Coding Coding MLH3 10:86670709-86694839 = TSS12330 4532 1 TCONS_00018305_5 1439 13 0.812714990260682 0.000689008289765345 0.00101314284452918 0.000680138101138341 0.000297636930283945 0.00056112067555747 0.000102641938143074 0.000204134199404402 0.000366793540378894 0.00114914218117305 4.24011711524187e-05 2.16317907459936e-05 0.00031167230950842 6.73722611317125e-05 3.42520121587485e-05 3.30048083919748e-09 0.000681437850519065 0.00104320462786213 0.000285273565086334 0.000460982988914606 0.00115456320503598 0.000332508931443428 0.00011066265727556 7.27600955898032e-05 0.000506524247450907 0.00170276199936917 0.000959769656212377 0.000589109723533824 5.81660093491686e-16 5.76071672992877e-05 0.00011643326178385 XM_003582742.2 MLH3 PREDICTED: Bos taurus mutL homolog 3 (E. coli) (MLH3), mRNA. 0.0 8143 99.96 0.997572815533981 XM_005267531.1 MLH3 PREDICTED: Homo sapiens mutL homolog 3 (E. coli) (MLH3), transcript 0.0 5148 86.02 0.965798764342454 TCONS_00018305_5 sp|Q9UHC1|MLH3_HUMAN MLH3_HUMAN DNA mismatch repair protein Mlh3; 0.0 2298 79.92 0.995830437804031 4 coding ATGATCAAATGCTTGTCAGCTGAAGTACAAGCTAGATTGCGTTCTGGTTTGGCTGTATGCTCCTTAGGCCAATGTGTTGAGGAGCTTGCCCTGAACAGTATTGATGCTGAAGCAAAGTGTGTGGCTGTCAGGGTGAACATGGAAACCTTTCAAGTTCAAGTGATAGACAATGGATTTGGGATGGGGAGTGATGATGTAGACAAGGTGGGAAATCGTTATTTCACCAGTAAATGCAACTCCATACAGGACTTGGAGAACCCAAGGTTTTATGGTTTCCGGGGGGAGGCGTTGGCCAGTATAGCTGATATGGCCAGTGCTGTGGAAATTTCATCCAAGAAAAACAAGTCGATGAAAACATTTGTGAAACTGTTTCAGAATGGGAAAGCCCTGAAAGCTTGTGAAGCTGACTTAACTCGACCAAGTGCCGGGACGACAGTCACTGTATATAATCTGTTTTATCAGTTACCTGTTAGGAGGAAATGCATGGATCCTAGACTGGAGTTTGAGAAGGTTAGGCAGAGGATAGAAGCTCTGTCACTCATGCACCCTACCATTTCTTTCTCTTTGAGAAATGATGTTTCTGGTTCCATGGTTCTTCAACTCCCTAAAACCAAAGACATATGTTCCCGATTTTGTCAAATTTATGGACTGGGTAAGTCCCAAAAGTTAAGAGAAATAAATTTTAAATATAAGGAGTTTGAGCTTACTGGCTTTATCAGCTCCGAAGCACATTATAATAAGAATATGCAGTTTTTGTTTGTGAACAAGAGGTTAGTTTTAAGGACAAAGTTGCATAAACTCATTGACTTTTTATTAAGGAAAGAAAGTATTATATGCAAACCAAAGAGTGGTTCTGCCAGTAGGCAAGTGAATTCAAATCCTCGGCCTCGGTCTAACCCGGAACTCCATGGTATCTATGTAATCAATGTGCAGTGCCAGTTCTGTGAGTATGACGTATGCCTGGAGCCAGCAAAAACCCTGATTGAGTTTCAGAACTGGGATACTCTTTTGATTTGCATTCAGGAAGGAGTAAAAACGTTTTTAAAGAAAGAAAAATTATTTGTGGAATTATCAAGTGAAGACATTAAGGAATTTAGTGAAGATAATGATTTTAGCTTGTTTAGTGCCAGTCTTCAGAAGCAAGTGTCCTCTGATGAGAAGTGTGGGCAGGTCAGTTTCCAAGAAGCATGTAATAATATTTTGGATTCCTACGAGATGTTCAATTTGCAGTCAAAAGCTGTGAAAAGAAAAGCTCCTGTAGAAAACATAAGCACACAAAATTCTAGGGATTCAGAAGCTATCAGAAAAAAGACAAATGATTCATTTTTGTACACTTACAAATCTGATGGGCCAGCCCATTGTAAAATGGCAGAGTCATCTTTGCAAAATGAAGACAGTGCTTGCTCACAGTCAAGGAACCTAGAACAAGAGACAGCTGGAGCATCAGAATTGGGAGAAAATAAGAAACATAAAAAATCTTGCTTGGAACATAACTCTTCAGAAAATCCATGTGGAACCACTTCAGAAATGTTTGGAAGCCCTTTTCAGACATTATATCACTTTGAGGGGAGTGGAGAAGATCTAGAAATACAGAAAGTAAGTACTACTGTTAATAGCATGGCTGCCAACATCCTGGAAAATAACAGAATTCAGAATCAACCAGAGAGATTTAAAGATGCTACTGAAATGGATTGCCAACCTCTGTCTTTTGAGACAGCATTATCAGGAGAACCTAGTGCTCAGAGAGAGGAAGAGAAAAGAAAAAAACCTAGTACTTGTGGAAGAATAAATGTTTTTCGTTATGGACAAGTTAAATTATGTTCCACTGGCTTCATAACTCATGTGGTACAGAATGAGCAAACTAAATTAACTGAAACAGAACATTTATTTAAAAGTTATGCTCAACCTGGTCCTGTGAGTGCCAAAGAAACATTTAGAAATAGAACACACCATTCAGTTGAGACTCCCAACAGCAAAGATTTAACCAGCACTTTAAGTAAAGAATTTGCTGAACTACCCAACAAAAGTCTGTACAGCACAAATCGAAGTTATGAGCTAGAGAACAAACATACAGCAGCCTGTAAAAATTTTGCTATTTTTCAGGAAAGTGGTAAAAAATCACACACAGGTGGCTTATTACCTAACACATCCTCTTTTTCTTGGGGTGGACATGTTTCAGATGGTAGTAAGAAAACAGACAAGTTGATTGGTCCTGCCGAACCCATACCTCATAAGAAGCTAAGCTTAAGCTCACAACTAGGATCTTTAGAGAAGTTTAAGAGGCAATATGGGAAGGTTAAAAATCCTCTGAATACTGAAGTGGAGGAAAATAATACTTTAGAAATCACTACCAATCTCAGTCCTCAGGTTGAAGCTGACATTCCATGGAAAGACAAAAACCACTTAGACAACTCTGACATCTGTGAAATCACTACTATGAAATATAATGATTCCTATGGTAGTTGTCAACCAGTAAATCACATGTTTTCTTCAGAAAAGCTTCCATTCTCCAAGGAAGATGATTGTTTGGAACAACAGATGCTTTGCTTAACAGAAAGCACTGTAACTCTACAGGAGTTACCTCATTTTAACAGTAAATTTTTGGATGTTGAGAAGTCACCTGAATCACTAGCCTCTAAATTATCCAGATTGAAGGGTTCCGAAAGAGAGACTCAAAGGATGGATGTGAATCATTTTAATGAATTGCTACAATTAGATTCCAGTAGGAAAGATGGTGACTTGTCCAGTGGGTTAACCCTAGATTCTTGTAAGTTATTTAAAAATGAGCATAAAAACCCAGAAAGTGACAGTATCCCAATGTCAGACTCTGTCACACAAGGTAATCTCTTCAGTAAAGACAGTGAAACATATTCTAACAACAATACCACTGAGAAGATACCAGAAAATCCTTTGGTACTGCCCTATGACCATGCTACAGTTATCAGTAAGGATTCAGATATTCTTATAGCTTCAAAACAACAGATTGGAAGTCCTGACTCTCTGAGTAGAATGTTAATGAGTCGCGTGGAAGATTCCACAGCTGACCAAAATGGAACTTGTTTTCAGAGTGAGGAATCCATAGCAAGAACTTGTTCTGAAAATGAAGAGTCCAACATATGTTCTTTGGATTGGCAGCAGCATTTTGATGTAACTCTGGGAAGAATGGTTTACATCAACAAACTAACAGGACTTAGCACATTCACTGCTCCTACTGAGGATGTTCAGGCTGCTTGTACTAAAGACCTGACAACTATGGCTGTGGATGTTCTACTGGAGAATGGATCTCAGTACAGGTGTCATCCCTTTAGAAGCGACCTTGTTCTTCCTTTCCTTCCTAGAGCTCGGGAAGAGAGGACTGTGATGAGACAGAATAACAGAGCTACTGGGGACGATGCCTTTGGTCCTGAATCACTTCAATCTTTGTTCTCAGAATGGGACAATCCAGTATTTGCCCGTTATCCAGAGGTTGCTGTTGACGTAAGCAGCGGCCAAGCTGAGAGCCTAGCAGTTAAAATTCACAACATCTTGTATCCTTATCGTTTCACCAAAGAAATGATTCACTCAATGCAGGTTCTCCAGCAAGTGGATAACAAGTTTATTGCCTGTTTAATGAGCACTAAGACTGAAGAGAATGGTGAGGCAGGTGGAAACCTGCTAGTCTTGGTGGACCAGCACGCTGCCCACGAGCGCATCCGATTGGAGCAGCTGATCATTGATTCCTATGAAAAGCAACAGCCACAAGGCTTTGGTCGAAAAAAATTACTGTCTTCCATTGTAAGTCCTCCACTAGAGATAACAGTGACAGAAGAACAAAGGAGACTCTTACGGTGTTACCACAAAAATCTGGAAGATCTGGGCCTTGAAATTGTATTTCCAGACACCAGTGATTCACTGGTCCTCATAGGAAAAGTACCACTCTGTTTTGTAGAAAGAGAAGCAAGTGAACTTCGAAGAGGAAGATCTACTGTGACCAAGGGCATTGTGGAGGAGTTTATTCGAGAACAAGTGGAGCTACTCCAGACCACAGGAGGCATCCAAGGGACTTTGCCACTGACTGTCCAGAAGGTGTTGGCATCCCAAGCCTGCCATGGGGCCATTAAGTTTAACGATGGCCTGAGCTTCGAGGAGAGCTGCCGCCTTATTGAAGCGCTGTCCTGGTGCCAGCTGCCGTTCCAGTGTGCTCATGGCAGGCCCTCTATGCTGCCATTAGCTAACATCGACCACTTGGAGCAGGAAAAACAGACTAAACCCAATCTTGCTAAACTTCGCAGAATGGCTCAAGCCTGGCATCTCTTTGGAAAGGAGAAGGATGTGATGTAGGGCAAGGCCTGCAGGCATCCATGCCTCCTTGTGAGCTGCCAAGAGAGCAGAATTACTGTCTGTGATCCCTCCAGTTGAGGAGCCAGATGGATTTCAAGCCTAAAGACGGGTCATTCATTAGCATCCATGGACACAGGAGGTTGCCCTCTAATGTCTACATTTTGTAATTTATAAAGGGGATAAAATTTAATGATTAATTGTATGATTGTCTG EMBV3_43450 ATAAGATTTCCACTCAGAGAAGTGGTGCTGGGATAGTTAAAACCACGTCCCACGCCGACT Gene BVT0102_067420 - 0 NULL GK000022.2:11928572-12015689 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35138 TCATCCGATCCTTCTCTGAGCGCTTCCTAGAGGATGGGCCCGAGTTGGAGAAGATCCTCA Gene GeneID:510200|DPP3:NM_001024513:569_cdna Constitutive 0 NULL GeneID:510200 29 GENE DPP3 NULL dipeptidyl-peptidase 3 EMBV3_16111 GCGAGAAGCAAGTCTCATTTTGGGTGTAAGGTGGGTCTCCTTACTTAGCAACCAAAATTA Variant GeneID:618047|DNAJC15:NM_001080332:220_cdna 331^401 4 EMBV3_02232 GeneID:618047 12 GENE DNAJC15 MGC148559 DnaJ (Hsp40) homolog, subfamily C, member 15 EMBV3_08182 AGCCCCGGGATAGCTTCGATGTGTTCGCCCAGTCTAGAGAGGCCAAGCCACTAGGGTGGT Gene GeneID:616315|TOM1L2:NM_001099154:108_cdna Constitutive 1 NULL GeneID:616315 19 GENE TOM1L2 MGC157155 target of myb1-like 2 (chicken) EMBV3_00462 CTGGTAACCTGTGCATGGTGACTGGTGGTGCTAACCTGGGAAGAATTGGCGTGATTACCA Gene GeneID:286873|RPS4Y1:NM_001082422:5_cdna Constitutive 0 NULL GeneID:286873 23 GENE RPS4Y1 RPS4 RPS4X ribosomal protein S4, Y-linked 1 EMBV3_01730 GAGGCCAGAGCAATTTTAACAGGGGTCCTCTTCCACCATTACGACCACTTAGTTCCACAG Gene GeneID:782848|KIAA1429:XM_002692817:148_cdna UTR3_Alt 3 NULL GeneID:782848 14 GENE KIAA1429 NULL hypothetical protein LOC782848 EMBV3_12856 ACAGGGGATGAGCTTGGTGTTGACCTGTTTGGTGGCCTCAGGTGATAAGAGCAGTTGTTC Gene BVV0102_089497 - 1 EMBV3_04017 GK000024.2:949139-1018252 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02650 AGACTTTTACTGCCCTGGCTGAAGCCTCCATTCACCTCCCTGCTCTGAAAATAGTCAACC Gene GeneID:784330|LRRC31:XM_002684941:114_cdna Constitutive 0 NULL GeneID:784330 1 GENE LRRC31 NULL leucine rich repeat containing 31 EMBV3_09979 GTTTCCTATGCCTTCATCCTGTCCAGTATCTTCCGCATCAGAACCACAGAGGGAATGTCC Gene GeneID:100337334|LOC100337334:XM_002699201:86_cdna Constitutive 0 NULL GeneID:100337334 29 GENE LOC100337334 NULL olfactory receptor, family 8, subfamily A, member 1-like EMBV3_13736 GGTTTTGAACCAAGAGGGACTGCAATAGGCCAGAGACTGGTCACATGGAATAACATGGTG Gene GeneID:534637|DISP1:NM_001038161:68_cdna Constitutive 1 NULL GeneID:534637 16 GENE DISP1 MGC133788 dispatched homolog 1 (Drosophila) EMBV3_36998 ATTAGGAGAGGGTCAAAGAGTGGACGTGAACCAGAGGAACTCGCTAGAATCCTTCAGGAG Gene GeneID:100298692|LOC100298692:XM_002696309:32_cdna Constitutive 0 NULL GeneID:100298692 20 GENE LOC100298692 NULL hypothetical protein LOC100298692 EMBV3_35819 CTTGGATTATAAGGAGCCTGGCGCTGCCGCCGCATCCTCTGCTTGGAAACTCAACTTCAA Gene GeneID:540628|OTX1:XM_002691382:264_cdna Constitutive 0 NULL GeneID:540628 11 GENE OTX1 NULL orthodenticle homeobox 1 EMBV3_09554 GTTTATGGGCTCCAATGAACTGTATGAGCATTTGGGGGCCCCAGGAGTAGGAAGTATTTC Gene GeneID:539292|PARD6G:NM_001098100:29_cdna Constitutive 0 NULL GeneID:539292 24 GENE PARD6G MGC155314 par-6 partitioning defective 6 homolog gamma (C. elegans) EMBV3_35860 ATAAGCAAATAGTAGAAGAGAGGGACCTAAGCAACCGCAGTACAGTGGAGGTCCTGGAGG Gene GeneID:100138338|LOC100138338:XM_002684804:176_cdna Constitutive 0 NULL GeneID:100138338 1 GENE LOC100138338 NULL similar to hCG1657343 EMBV3_13016 CCCAGAAACATCCTTCCCGAAGAAGTGAGCTGAAGAGGTTCTACACCATTGGCATCCTAG Gene GeneID:782927|LOC782927:XM_002692753:87_cdna Constitutive 0 NULL GeneID:782927 14 GENE LOC782927 NULL hypothetical LOC782927 EMBV3_09537 TCCTCGGCAGTTCTTCGCCTGCAGTGGGCCAGGCCTCAAAGGAAAGCCTCGCTCATTTAT Gene BVV0102_063559 - 1 EMBV3_34859 GK000011.2:60296936-60336074 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025065 1 XLOC_014661 NonCoding TCONS_00025065 XLOC_014661 NonCoding NonCoding - 11:60317246-60318296 - TSS18276 1050 2 TCONS_00025065_1 52 1 0 2.33424708254617e-11 0 1.76266689988516e-05 0 0.000235079127229261 0 7.91261324106512e-11 0 0 0 0 3.40541383270375e-06 2.73265187193709e-06 0 0.000132919573899518 0 0 7.16883590788722e-05 0 6.84898811397277e-06 0 0 0 0 0 0 0.00101558641792311 0 1.38702969659086e-05 0 XR_227070.1 LOC101902014 PREDICTED: Bos taurus uncharacterized LOC101902014 (LOC101902014), 2e-117 426 100.00 0.223809523809524 0 noncoding 0 0 0 0 0.0395517144119811 0.722213145821616 -0.000432797147407127 0.994291508999415 GGGGTGCGGGGGAGGTCGGCAGAGTTAAAGTTTTTCCTGAAAATGAAAGGCTCCCCCTCTCCCATCCACCCGCCTCTTCCCGTCATTCTGGAGGCGCTTAGAGGCCGCCGCGGGGGAAGGCCGTTTCTCTGGGTGACGATTTACAAGAACGCTGCCAGCGTCAACAACGCTGGCCGACTATTGTGTGTTACTGCTGCCTAGAAAGGTGGACGGGGCACAGCGCAGCGTGGGACGTGAAGGCGAGGTACACACTGATTGGCCCGCGGCTGCCCAGGCCGCTGCTGGGGGCGGGGCGGCGTGCAGGCGGGGTGGCGCGCGTGCGCAAAGGCTTCCCCTCGAGCCGGACAGTTTCCCGGGTGCCAATGTGGGTGTTCCAGTCGCGGAACTGGGCGGAGCGAGGGGTTTGATTTTGGCCTGGCCGCGGGAATGGGGGCCGTTAATCTTTCACACACGCACAACTAGCAGGGCGCATAAATGAGCGAGGCTTTCCTTTGAGGCCTGGCCCACTGCAGGCGAAGAACTGCCGAGGAGTGAGAGGCGAGGCCCGGGCCAAAAGATGGGATCACATGCGGGCCACTGCCTGCGTAGCGTAGGGCGGGGAAGCCCTGCGGAAAAGCCAGAGTGGAAGGACCGACAGCCCAAACACTACCGCTCCCTTTGGCTAGGTACCTAACTTTATGGTGATAAATTAGTAGCTTTGTTATAGAAGTCTAGTTTTAAGTCCCAGAGAGTGGACAAGAATCACATACTGTTTTGAGAGAGTAATACCTCCATGGGAGACCTCGAAGCCCAGTAAGGCTTCCAGATTTCCTGACCATTTGGTAAATGATGTTCAAAGGAAAAATTAAGATATGTCCATCTATGTAACTCTTCAGGCTTAAATACCTGTTTATCTTAAATTACAAAATTAAGTGAAGGAAACTTTGTAGTAGGTTATAGTGACCAATTGGCTACTATTCATTATCGTTTAAAATTTTTCTTAATTTGTAGGTATCAGAGAGCCTTTTGCTATTTTATTCTTGGAGTATTGTTGTAAATGAAAAATTTTAC TCONS_00027979 TCONS_00027980 TCONS_00027981 TCONS_00027982 TCONS_00027983 TCONS_00027984 TCONS_00027985 TCONS_00027986 TCONS_00027987 TCONS_00027988 TCONS_00027989 r 3' 34239 TCONS_00027979 TCONS_00027980 TCONS_00027981 TCONS_00027982 TCONS_00027983 TCONS_00027984 TCONS_00027985 TCONS_00027986 TCONS_00027987 TCONS_00027988 TCONS_00027989 r 3' 35288 EMBV3_34332 GCAGCCACTTTCTCCTTTACCCCCACGTATCCCTGTCCTCAATGTGGGTTCCATCTCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08498 CGTGGTTAAATTGAAAAGCCCATCCAGCAAAAGTGCTAAGGTTTTCCATCCGCCAGGTGG Gene GeneID:523361|MGC133696:NM_001038136:61_cdna Constitutive 0 NULL GeneID:523361 27 GENE MGC133696 NULL hypothetical LOC523361 EMBV3_12589 GGCAAGAGTCCTGGAGTGGGTTGCCATTGCTTTCTCCAGCTATCTGTATACTCATTTTTA Gene GeneID:513798|CDNF:XM_002692100:311_cdna Constitutive 1 NULL GeneID:513798 13 GENE CDNF ARMETL1 cerebral dopamine neurotrophic factor EMBV3_14255 TATTTCAAAGGGTGCTTTTTAGAACCAAAGAAAGTGAAATTATTATTGACGATGGACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16760 TGGAGAAATAAGAACTCTTGGTTGGGATAAAGCTCCTTAATAAGCATTTATACTCAGTTT Variant GeneID:614512|FANCL:NM_001076332:170_cdna 398^560 5 EMBV3_29659 GeneID:614512 11 GENE FANCL MGC133719 Fanconi anemia, complementation group L EMBV3_21986 GCGTTTGCATTCCAGTCACCCAAATATGGAAACTGTCAAGTGTCTGTAACCCTCCTGGGG Gene GeneID:520990|VPS39:XM_002690809:34_cdna Constitutive 0 NULL GeneID:520990 10 GENE VPS39 NULL vacuolar protein sorting 39 homolog (S. cerevisiae) EMBV3_31941 GAGGAGCTGGAGGAGGAAGACGACGAGGAGGTTTTCCAGGGCAGCCTTGTGGATTGGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03893 CTCTTTCTTTTTATTTATCCTTACAAACTGCTTGGTTAAGGTCAGTGGTTGTTGCTTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24655 TTCCACTAAGCATGAGTGCCAGCATCAAATCTTTAAATCTGATTTTGAGACAGTTGAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06672 CCCCCTCCATTTATGTGTATTGGTGACAGTGGGTATAAACAGCCTGAAAGTGTATGCATG Gene GeneID:508172|FBXO11:NM_001101894:71_cdna Constitutive 0 NULL GeneID:508172 11 GENE FBXO11 MGC165933 F-box protein 11 EMBV3_39193 CAATCTGCTGTGTCTTAAGTCGGGTAGAACTAAGTGACTGACATGGGGTGGAGAAGAGGG Gene GeneID:788567|LRRN4CL:XM_002699292:233_cdna Constitutive 0 NULL GeneID:788567 29 GENE LRRN4CL NULL LRRN4 C-terminal like EMBV3_39140 TGGCCACAAAGCCACAGAGTAGCCGGGAATGACTGAATTGTTCGACCCTGATTGGACCCT Gene GeneID:616416|KCTD12:XM_002691892:16_cdna Constitutive 0 NULL GeneID:616416 12 GENE KCTD12 NULL potassium channel tetramerisation domain containing 12 EMBV3_42560 AGAGAGGGTGAAGATGGTGATCTTTCCTCCTGGCTTCCGACACAACTCGCTTTGTAAAAG Gene GeneID:100138482|ABHD12B:XM_002690867:260_cdna Constitutive 0 NULL GeneID:100138482 10 GENE ABHD12B NULL abhydrolase domain containing 12B EMBV3_15239 GGATTGGTGGAAGTAGCATCCATTACTGTGAACGCATCTGATTCTGAACCATCACCCCCC Gene GeneID:768254|ZNF280B:NM_001078120:294_cdna Constitutive 0 NULL GeneID:768254 17 GENE ZNF280B MGC133706 zinc finger protein 280B EMBV3_12865 CTTAAGAGGACAGGAGAGAGTGATGCTCCTCCCAAGCAAAAGTGGGTGAAGAACTGTGGG Gene BVV0101_013421 + 0 NULL GK000022.2:21374043-21492895 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02960 GTCCATATGCCTTGGAATACAAACTCGTCTCCCTCCCGTTTGGAATAGCTGCCAATCAAG Gene GeneID:521326|HMCN1:XM_002694249:217_cdna Constitutive 0 NULL GeneID:521326 16 GENE HMCN1 NULL hemicentin 1 EMBV3_32818 CATCAGAGTTAGCCGGGGAGTACGTATGCATTGAGTATGCGGCTGCGGACTACATAGGAA Gene GeneID:532330|LOC532330:XM_002698132:498_cdna Constitutive 0 NULL GeneID:532330 25 GENE LOC532330 NULL similar to insulin receptor substrate-3 EMBV3_37313 GCGCGCGCAGGCCTTCCGCCGGCTGGAGGAGTGGCCCTGCTGCAGCTGATGGGGACACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16940 GCTATTCTCAATACCTCTGTGGCCCCCATGCTGAACCCCTTCATCTACACCCTGAGAAAC Gene GeneID:788144|LOC788144:XM_002687608:715_cdna Constitutive 0 NULL GeneID:788144 5 GENE LOC788144 NULL similar to olfactory receptor, family 6, subfamily C, member 3 EMBV3_23745 GAACCACACTAATGCAAGATGTTAATAATAGGGGACACTGTTTGGCAAGGTGAGGGTCTA Gene BVV0102_124024 - 1 EMBV3_27051 GK000004.2:58083704-58723589 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11177 AATGGTGAGGCTTCTCGCCACTGTGGCTGCTGCGGTGCTTGAGCAGTGTGGAGCGCCAAC Gene GeneID:100138869|LOC100138869:XM_002688854:198_cdna Constitutive 0 NULL GeneID:100138869 7 GENE LOC100138869 NULL hypothetical protein LOC100138869 EMBV3_06283 TAGGAAGGTCATGGAAAGGTCATGGGTTCTGTCTAGGGTGATCCAGGTCGTGTGGACAGA Gene BVT0102_232516 - 1 EMBV3_22906 GK000018.2:56545054-56546191 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084304 TCONS_00084301 TCONS_00084299 TCONS_00084302 TCONS_00084298 TCONS_00084303 TCONS_00084297 TCONS_00084306 TCONS_00084300 1 XLOC_051519 Coding TCONS_00084297 XLOC_051519 Coding Coding PRMT1 18:56534809-56546131 = TSS63175 2409 1 TCONS_00084297_3 353 10 0.788092924653299 0.00302656522575395 9.9553782685943e-05 0.00309859553748982 0.00246481142945468 0.00354927685504655 0.00113604187858821 0.00130025210534542 0.0006414370265341 0.00252558301891607 0.000497230670885307 2.49894969852174e-13 4.9630578467792e-06 0.000448550355705775 5.76250755361846e-14 1.45085951643699e-15 0.000406899485655544 3.34271720636095e-10 0.000626631482751475 0.00210423827029428 0.00187984545431979 5.91337632082494e-05 2.13104559313779e-06 0.000245076227458553 0.000164474476686511 0.00169793848583749 0.00131718977366686 0.00109667816607738 1.84857355198391e-09 1.07447931070503e-05 1.26708113582094e-09 NM_001015624.1 PRMT1 Bos taurus protein arginine methyltransferase 1 (PRMT1), mRNA. 0.0 2354 99.92 0.542548775425488 NM_198318.4 PRMT1 Homo sapiens protein arginine methyltransferase 1 (PRMT1), 0.0 1988 93.04 0.551266085512661 TCONS_00084297_3 sp|Q9JIF0|ANM1_MOUSE ANM1_MOUSE Protein arginine N-methyltransferase 1; 0.0 726 94.88 0.997167138810198 6 coding 0 0 0 0 0.051121666033404 0.797219144240379 0.051121666033404 0.797219144240379 GCGGAGAAAGGGGGGGGTCTCGGCGGCCGGAGGAGGAGTAGACGCGGGTGAAGATGGCGGCAGCCGAGGCCGCGAACTGCATCATGGAGGTCTCCTGTGGCCAGGCAGAAAGCAGCGAGAAGCCCAACGCTGAGGACATGACGTCCAAAGATTACTACTTTGACTCCTACGCTCACTTCGGCATCCACGAGGAAATGCTGAAAGATGAGGTCCGCACCCTCACATACCGCAACTCCATGTTTCACAACCGGCACCTTTTCAAAGACAAGGTGGTGCTGGACGTGGGCTCGGGTACAGGGATCCTCTGCATGTTTGCCGCCAAGGCTGGGGCCCGCAAGGTCATCGGGATCGAGTGTTCCAGTATCTCTGATTATGCGGTGAAGATCGTCAAAGCCAACAAGTTAGACCATGTGGTGACCATCATCAAGGGGAAGGTGGAGGAGGTGGAGCTCCCAGTGGAGAAGGTGGACATCATCATCAGCGAGTGGATGGGCTACTGCCTCTTCTACGAGTCGATGCTCAACACTGTGCTCTATGCCCGAGACAAGTGGCTGGCACCCGATGGCCTCATCTTCCCAGATCGAGCCACGCTGTACGTGACGGCCATCGAGGACCGGCAGTACAAAGACTACAAGATCCACTGGTGGGAGAATGTGTACGGCTTCGACATGTCTTGCATCAAAGACGTGGCCATCAAGGAGCCCCTGGTGGATGTGGTGGACCCCAAGCAGCTGGTCACCAATGCCTGCCTCATCAAGGAGGTGGACATCTACACAGTCAAGGTGGAAGACCTGACCTTCACCTCCCCCTTCTGCCTGCAAGTGAAGCGGAACGACTACGTGCACGCCCTGGTGGCCTACTTCAACATCGAGTTCACCCGCTGCCACAAGAGGACCGGCTTCTCCACCAGCCCCGAGTCCCCCTACACTCACTGGAAGCAGACAGTGTTCTACATGGAGGACTACCTGACGGTGAAGACAGGCGAGGAGATCTTTGGCACCATTGGCATGCGGCCCAACGCCAAGAACAACCGTGACCTGGACTTCACCATCGACCTGGACTTCAAGGGCCAGCTGTGTGAGCTCTCCTGCTCCACTGACTACCGGATGCGCTGAGGCGGCGCCCGGCTTCTCCCACCCCAGCCAGGCTGGCCCTGCAAGGGCCCAGGGGCTGTGGCGTTCTTAGGCGGTTTCGGGGCTCCCCCTTCCTCTCCCTCCCTCCCACAGAAGGGGGTTTTAGGGGCTGGGGGTGGGGGGGGCACATCGTGACTGTGTTTTTCATAACTTATGTTTTTATATGGTTGCATTTACGCCAATAAATCCTCAGCTGGGATGGCACCTCAGCTTCCTGGGGGGCACGGTGGGGTCGGGGTTCTGTCTGCAGGTGTCCAAACCACCCAGGACACAGAGACAGCACCCGCTGGTGGCTTCAGGTCTCTGTTACCACTTCTGTGTCTCTGGGTCTTGCTACCTTTCCCCAGCCTCCTGGATTCCACAGCCTCCACTCTCAAGTCCCACCTGGCCCTCAGCTCACTCACAGGGTGGTCTCCACTGGCTCTCAGAGTCTGCCCCCCGCCACCCCCATCTAATGTCTCCTCCTGTCACAGGGGCCTCTGCCGGGCTGGGGGAGGGCTGGGGTGTGGATTTCCAGCACAGCTGGCCTCTGAGGTTTCCCAGAAGCCCTCTCTCACGCCTTCCCCCATCACACACATTGTTCCTCTCGGGCTGTTTTTTCCTGTCCAGGACCCTCCAAGGCCAAACCAAGGCTGATTGGCAGTGCCTGCTGCCCTGCCCTCTCCACCTGGGGAAACTGAGTCGGGGGTGGGGGGGCGGTTCTTTGTTGGGGTGGCTGCCTGCTTCCTCCCTCAGCCTGGCTTGGAACTCAGGGGGTTCCCACCATCTGCCCCACCTTGGAGATGCACACTGAGACCCCACTGGCCTTCACCGCTCCCAGTGACTGGCTCTCCAGCCTCTGCTGCAGACGTGGTACCTGCGCCTGCCCACCCTGCCCTTCCCAAGGCCATGTCCCAAAGTCACTGGCCCCCTAGGTCTCTGTCCACACGACCTGGATCACCCTAGACAGAACCCATGACCTTTCCATGACCTTCCTACGGCTGCTTCAGTACAGCTGAAATGCTTGGCCTGCTGGCACCCCACACCCATCTGCACACATTCCTCTTCTACCAGCATGGTGTTAGGGTCCAAGCTGACTCCACGACTTGAGGTGCCTCAGTTTGCCGCCTGTCCCAATTGTCAGTGCCCCGCATTGCCCAGCCCCCGCCCTGGAAGTCGCCTGTCCCTTGACATTGCTGTGCCAAAACAGCAGAAGAGGGTGAAGTCGCGCCTTGCAGCATCCCCGCCCCCAGTCCTTTCCTGGAAGCCCTAAACTGCGTCGCCACTCGCAGGTGTC EMBV3_43048 CTGATGGGCTACAGGCCAAGAGGTCACAAAGAGTTGGGTACAACTGAGCAACTAAGCACA Gene BVV0102_238750 + 0 NULL GK000005.2:95893052-96152771 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27922 ACCCTCAGCGAGTTGTCATGTCCTGCTCTTTTAATGTAGTTCTAAATATCACATGCTGCC Gene BVT0102_110583 + 0 NULL GK000007.2:51498200-51506215 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12880 GTGAAGGAATGGCAGCTGAGTGGAATCCCCAGAACCCCCTCCAACCAGAGCAGTTCTGTT Gene BVV0102_209221 + 0 NULL GK000003.2:92621190-92645637 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170684 1 XLOC_103634 Coding TCONS_00170684 XLOC_103634 Coding Coding CYB5RL 3:92603825-92629819 j TSS127471 2815 2 TCONS_00170684_3 246 0.211722912966252 7 0.891970915246412 0.000202982614380107 0.000188477580255699 0.000348230563809058 5.47904576434596e-05 6.04277347894105e-05 4.69789101611389e-05 9.16904591584225e-05 6.77616951867456e-06 0.000374469126147501 2.79458580940815e-17 3.00887719021341e-05 0 2.65013602012456e-05 4.01273518176225e-06 3.67938383006613e-06 0.000394062920224112 0 0.00145286429482795 3.7183201194132e-05 1.71502098500656e-94 0 0.000204285344263357 0.000162949448584254 0.000899275152708102 0.00118387081667932 9.58877374262e-06 0.000105344656265862 2.38850420574166e-05 8.62275326876723e-06 2.13579395262128e-06 XM_005204552.1 CYB5RL PREDICTED: Bos taurus cytochrome b5 reductase-like (CYB5RL), 0.0 3727 100.00 0.733570159857904 NM_001031672.2 CYB5RL Homo sapiens cytochrome b5 reductase-like (CYB5RL), mRNA. 0.0 702 73.25 0.435168738898757 TCONS_00170684_3 sp|Q6IPT4|NB5R5_HUMAN NB5R5_HUMAN NADH-cytochrome b5 reductase-like; 7e-105 311 86.83 0.67479674796748 2 coding 0 0 0 0 -0.173747395982196 0.663262750714553 0.0483543760167272 0.345405480518332 GTGAAACCTGCAAGATCTTTACCTGAGGGAAAGCGCAGGAGGGTAGGTTTTATCTGTTTAGTGTCTGACTCCTCCAGGCCAGGAGCTCCTCCAGGACATGGACGAGTGTCATTCATCTCTGTCCCAGCACCTCATTCAGCAGCCCCTGCCCAGCTGGCAAGGGAGCAGGGCCTGGGCCTGCTCTGGGAAGAGTATCTGATCAAGCCCCACTGATGATGGACCAGGGGGAGGAAGGTGATGAAGAGGAAGCCTGGCTGCAGCTTCGACCGGTGGAGCCTTTGCCCTCGCAGTGCTGTGGCAGTGGCTGCTCGCCCTGTGTGTTCGACATCTACCAGCGAGACCTGGCAAGGTGGGAGGCTGCCCGAGCCAGCAAGGACAGGAGCCTGCTGAGTAGGGAAGAGACACAGAGCTGCCCTTCCAAGCTGAGCCCAGAGACCTTCCTGGCCTTCCTCATCAGTGCTGTGGACAGGCTCACTGAGGACACCTACCTTGTCCGGTTTGCACTACCCGGGAACAGCCAGCTTGGCCTGCGGCCTGGCCAGCACCTCATTCTACGAGGGACAGTAGATGACTTAGAAATTCAGAGAGCCTATACGCCCATCAGCCCTGCCAATGCAGAAGGATACTTCGAAGTTTTAATCAAGTGCTACCAGACTGGGCTGATGTCCCGGTATGTCAAGTCCTGGAAAGCAGGAGACACAGCTTTCTGGAGAGGACCCTTCGGAGGCTTCTTCTATAAACCAAACCAGGAGAACTCCCTGGAGCAGCTTCCCTGGAGTTACCGCGACAGGACCCGCTTTGGCCGCCTGGACCGGGACCTGCTTGAAGAGCTGGTCGGCTCCTGTCGGAGAAAGCCATTCGCCCTGGTCTGTGGATCAGCTGAGTTTACCAAGGACATGGCTGGGTACTTGCTGCACGCAGGCCTGGCTGAGGACTCCTACTTCCTCTTCTAGGCCTGGCCTCGCTTCTAAAGCTCAGGCTTGGGGCCCGGCACTGGGAAGCAGGAAGGAGCACAGACTGGAATCCGAAGACATGAATGGGAGACTGCTGTTGGTGCTCCAGGTGACCTGGGACAAATATCTTTGCCTCTGCAGACCTCCATTTCTCATCCATCCCACGAGGTCACTGACGCTCCGACAGGCATCCTGCTGGGAGGATAGAGGATGGGGCAGTAGGAGTCCTGAACAGGAAAGTATACAGTGGGCAGTCAGGGAGGACTTCCTGGAAGGAGCCAGGTCCTGGCTGAGTAGGAATTGGCAGGAGGAGGACTGGGAGGGGCTTTCCTGATTGTTCAGCCAAAGCCTGCTTTCCCTGGAGTCTGTGTATCTCTTGTGGCCTCCGGGCCATCTCAGAGGAGGTGCTCACCGACTGTTTAGGGAATGACCGCAGGGGAGGCTGGAGGAAGAACTTGCTGTCTGGGCCTCTAGTGCTGTGAGCCTGACACAATGAAGGTCGAGGCTTTTTTGACCTGACCACTTCTCAGAGCAAGGTGGGGCCCTAGTCTACCTTTCTTTTGGCCCCAGGCCCTTCCTGCTGCAAAGGGCTTCCCTCTCAGTCTCCCTTTCCTGGCTCAAGAGCCCAGCCCAGAGTCCTTTCCCTGGCAAAAGAGGTACGGAAGGAAGCTAATGCCCCTCCCTCCTGCAGGCAGCCAGCTCAGGCAGCCAGCTCAGCCCGCGCCTGCAGCTCAGCACCCTGGTGACGGTTGCTATGGAGATCTAAAGATAGAGCAGGAGTCGGGAGACCTGGGTCCCTCTCCCTGCTCTGCCCATTGAGCTGCTGCTGTTCCCACCCCTCCACACGCCACCCGCTCCATCCTGCACGGGGGATGCCCTCCCCAGGGAACCCAGTGCCCCTGGGCAGCACACTGCAGTTAATGAATTCTGCTTTTTTGCAGCCTGTGCTCCTGTCTGCTGCACCAGCTCCGGCTGGCTACAGGCAGTCCCAGAACTGGAATATTCAGCCATGGAATCTCGGAATCAAAGGACCATAAAATCGTAGAGTTAGAATTTTGCAGTCATAAAATCACAGTCCTCATCACATGAGTGTGTGCATGCTAAGTCACTTCAGTCTTGTCTGACTCTTTGCCCGCCAGGCTCCTCTATCCCTGGAATTCTGTGGGCAAGAATAGTAGAATGGGTTGCCGTACCCTCCTCCAGGGGATCTTCCCGACCCAGGGCTTGAACCCACCCATGCCACCTACATTGGCAGGCAAATTCTTTACCACTAGCACCACCTCGGAAGCCCAGTCCTCATCGTATCAGAGGTTAAAGCTCAGGACTCCAGAAAGTATCTCATCTATCAGACTCATTGTATCAATGCAGAAACCAGGGCCCAGAGAGGCCATGTGATCTGCCCAATATAAAACAGTTCACGGCGGGGCCATTGTCAGAAGCCAGATTTATGTCAGCCCTGTCCACAGATTCTGTACCAGTGGTTTTTTAGACTAGACTCTTTAGGATAGCATAGTTCCTGGCATGGCAGCCGTGAAGGAATGGCAGCTGAGTGGAATCCCCAGAACCCCCTCCAACCAGAGCAGTTCTGTTTTTATCCCATTTATATCTTGGGGCTTGGAGTCATTTTCATTTGTGAAATAGAGTTTTCCTGCACTGCCCAAAAAGTTGCAACAAAACTCTGTGCTGTGCCATGTTCAGTAAATAAGGACAGGCCATCGTGGGGTGGTCCCAAAGGTTTCAAACCAAGTTTCACAGACAGCATTCCATGGTCAAATAGATGTGGGGAATACAGCCTGTGGCCTTTGCCAGCAATTATGTGCATGTAAGCATGTGAGCATAATAAAGGATCTGAAAAGTCCAGT EMBV3_16683 TATATCGCCTGCTGGGCGCCTTTCTTCAGTGTCCAGATGTGGTCTGTGTGGGATGAGAAT Gene GeneID:282861|AVPR1B:XM_002693889:200_cdna Constitutive 0 NULL GeneID:282861 16 GENE AVPR1B AVPR3 arginine vasopressin receptor 1B EMBV3_05980 CCGAGGAAGATTATAACTTTGTCTTCAAGGGTACTATCGTGGTGCTGTGGGGGCCCTCCT Variant GeneID:506482|RAB25:NM_001017936:88_cdna 270^465 1 EMBV3_24459 GeneID:506482 3 GENE RAB25 MGC140813 RAB25, member RAS oncogene family EMBV3_41856 ACTGTGGATATATGTGAGACCTGAGTGACTGGTTCCCGCTTTCCTCATTGGATGTGACCC Gene GeneID:537885|UBE2R2:XM_002689798:85_cdna UTR3_Alt 2 NULL GeneID:537885 8 GENE UBE2R2 NULL ubiquitin-conjugating enzyme E2R 2 EMBV3_14713 TCCTGAAGGCCGTCGTCTACAAGAATTATCCAAAAGACATCCAGACGGCATCGATCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39668 CTCAATAACATAGTTGTTAAAGACACAAAGATGTTCAAACAGAAGCAATTTCTAGCCTCA Gene BVV0102_362951 - 1 EMBV3_42096 GK000022.2:44183680-44213142 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32861 CATGGCACCCTCCTCTATGACATCCGTCCATTTGTGGTGAACCAGTGAAGGTGGTGACTT Gene BVT0102_007421 + 0 NULL GK000005.2:111317966-111346361 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201714 1 XLOC_123359 NonCoding TCONS_00201714 XLOC_123359 NonCoding NonCoding - 5:111323227-111324230 - TSS151282 1003 3 TCONS_00201714_1 57 1 0 0 0 0 0 4.92240978891679e-06 0 0 0 0 0 0 0 0 0 0 0.00294924780817286 3.31051110387502e-05 0.000575365537462953 0 0 0 8.13832111700796e-05 0.000640262728643555 3.34290187683466e-05 0 0 0 0 5.32409601042445e-05 0 XM_005207334.1 SYNGR1 PREDICTED: Bos taurus synaptogyrin 1 (SYNGR1), transcript variant 0.0 1810 100.00 0.999002991026919 NM_004711.4 SYNGR1 Homo sapiens synaptogyrin 1 (SYNGR1), transcript variant 1a, mRNA. 0.0 796 79.85 0.928215353938185 0 noncoding 0 0 0 0 -0.286952060207659 0.0471932583601409 -0.0499179936090081 0.31629591022712 GCTTCTGTTGGCTGGGGACAATCCCCTGGAGGCCTCAAGCCTGGAGCCAGTGCTCACAGGTCAGTGGCACCCCCTTTCCCTCCCTGCTGCCCCTCCTCTGCCTCCCCCCTGCTTCCAAGCCTTTCCTTGGAGAAGGGCACCCCTGCAGTCTGACCTTGCTGAGTTTGGACCCCCTCCTCCCATCGAGTACTAGAGAGGGCCAAGGAAAACTGAGTTCCACACGAGTTTAGAGCTTCGAGGACCCTTACAGGGGTGAAGTCTGGGCCAGGAAGACAGTGACTTGTCCATGGTTAAGCACAGAGCTAGAGGTTCCAGATCCAGGTCTCCAGCCTCTGATTGTGCAGTCACAGGTCATCTGCCTGGGTGTGGCTCCTGCCACACCTGGGGGTGTAACTGTTGGGGCCAGCTCAGAGGGTCCCAGCATCTGCTCCCCACTCCTGCCTTCCCAGGTGATTCTTGATCTTCAAAGTCTGTTGGGGATCTCAGGCTTCCCCCATGTAACCAAGACCACCCCCCCGTACTACCCCTCGGGAGCCCCCAGTCTTGGCCCAAGACCCCTTTGATTCTCTATGGAGCACAAAGGGGGAGCACCCCTCCCAACAAGAGTTTGTGGGAGGATGGACGTGTCCACCCATCTCCTGGCGCTGCCCCTCAATGTGACACTCCCCGTACCCAGGTGCCCACAGCCCTTGTCTGGGTGCCCCCGCCCTGCCCGCAGCGTTACTGCCTGTGTATAGTATAAATATATATATTTTCTATATATAAGATGTATAATATAAGGCTCCACAAATATATCTGTGTGTGTGTGCGTGTGCGCAGTGAATGGCAGTCCCCATCCTGGGCCCCCACTCTGGACTCCCCCACCACCTGGTTAAGTCTCTCACGAGTGAATCCAGTGGCCCCATGGCACCCTCCTCTATGACATCCGTCCATTTGTGGTGAACCAGTGAAGGTGGTGACTTCTGGTGACATAGTAATAAAGTGAAGACTCAAAACCCACCAG TCONS_00193419 . 3' 2688 TCONS_00193419 . 3' 3690 EMBV3_06000 TGCCAACTTCCTGACTGCCAGAGCCTCAACTGCCTTTGCTTTGAGATCAAGCTCCGATGA Gene GeneID:785953|LOC785953:XM_002698058:20_cdna Constitutive 0 NULL GeneID:785953 25 GENE LOC785953 NULL similar to fructose-1,6-bisphosphate aldolase A EMBV3_25988 TGTAACTTCATTCTTCATATAAGCTTGCTATACAGGTATGTTCATCTTTGTGTACAAAGG Gene GeneID:539598|ZCCHC8:XM_002694484:337_cdna Constitutive 3 NULL GeneID:539598 17 GENE ZCCHC8 NULL zinc finger, CCHC domain containing 8 EMBV3_10957 AGAAAAGTGGGCTTGTGGTGGAAGATCACCTTTTTGACACCCTTCCCCTCGAAGTCAAAG Gene GeneID:539204|LRRC8D:NM_001083741:180_cdna Constitutive 0 NULL GeneID:539204 3 GENE LRRC8D MGC139620 leucine rich repeat containing 8 family, member D EMBV3_15340 GGACTGAATGAGTGGCTGCAGTTTTGGAAAGAAACTAGGTGAGATTTGGGATCACCTTTG Gene GeneID:281811|HADHB:NM_174336:30_cdna Constitutive 0 NULL GeneID:281811 11 GENE HADHB NULL hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit EMBV3_10020 CTCTTCACCAACTCAAATTCTCTGTTTCCCCCCTGTCTTAACCTAACTGGATTCCTCAAT Gene BVV0102_173961 - 1 EMBV3_34533 GK000002.2:81275828-81639830 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13369 CAGGAACCTTAGTTACTTGACGAACAGAGCTTTGCCTGGTGCTGAGTACTGTATTGTGGC Gene GeneID:281586|TAP2:NM_174222:41_cdna Constitutive 0 NULL GeneID:281586 23 GENE TAP2 ABCB3 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) EMBV3_28650 ATTCAGGAATTGTACATGGCCCAGGATGCCTCCCCACCTGAAGACCCTTTGGAAGTTGAT Gene GeneID:512222|PDE4A:NM_001101081:26_cdna Constitutive 0 NULL GeneID:512222 7 GENE PDE4A NULL phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila) EMBV3_21364 AGAAGTTCTCGTGACTTGTGTTTTTCTTGTATATGAGCAATTCCTCTGGCCAGGTTTCCG Gene GeneID:532711|LOC532711:XM_002690817:56_cdna Constitutive 0 NULL GeneID:532711 10 GENE LOC532711 NULL similar to family with sequence similarity 98, member B EMBV3_32292 GGGAACCCTCTTGCCCAGTTGGTGAGAATGTAAATTGATACAGCCACTATGGAGAAAACC Gene BVV0102_014263 - 1 EMBV3_25077 GK000005.2:22897833-23348067 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15545 CAGCTTCAGGGGGTTAACTCTCCTTCCCAGGACTGAGAACTGTAGAAAGCCACACAAGTA Gene GeneID:508692|OSR2:NM_001034328:24_cdna Constitutive 0 NULL GeneID:508692 14 GENE OSR2 MGC127149 odd-skipped related 2 (Drosophila) EMBV3_19305 CCTTACAGAAACACATGAGAAGGCACACCGCTGAGAAGCTTTATGAATGTGAGCAATGCC Gene GeneID:538773|ZNF555:NM_001082449:23_cdna Constitutive 0 NULL GeneID:538773 7 GENE ZNF555 MGC148507 ZNF14 zinc finger protein 555 EMBV3_13726 GTGGACATTTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAA Gene GeneID:538481|TET2:XM_002688092:151_cdna Constitutive 2 NULL GeneID:538481 6 GENE TET2 NULL tet oncogene family member 2 EMBV3_24269 CGCCTGTTTGCTGCTCCCTCCATGTCTTAGAGAACACTCTGGGGTCTGATTGTGGAGTTT Gene GeneID:527807|FBXO42:XM_002685743:491_cdna Constitutive 0 NULL GeneID:527807 2 GENE FBXO42 MGC137395 F-box protein 42 EMBV3_20617 CTGCCTGACGACTAGGAATAAATTAGCCCTCTAAACTCGGTTCAGTTTAACGTTTGCCCC Gene GeneID:518288|P4HA1:NM_001075770:323_cdna UTR3_Alt 2 NULL GeneID:518288 28 GENE P4HA1 MGC137838 MGC159694 prolyl 4-hydroxylase, alpha polypeptide I EMBV3_28836 AGGAGGGGGTGCGGGAGGTATTTGAGATGGCCTGACAGTGGTGGCCGTAGGCACGCCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15508 GACACGCCTGTGCCCAAGTTTGAATTTTATAGTATCAACCTTTTAATTATTGGCACTGAG Gene GeneID:505807|PCMTD2:NM_001024479:889_cdna Constitutive 2 NULL GeneID:505807 13 GENE PCMTD2 C20orf36 MGC139967 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 EMBV3_22734 ACCGTGTAACCAACAGAGATGCACATCAGCAAAACCTGGCATTCACTCCAGACTTAACGC Gene BVV0102_067012 + 1 EMBV3_28874 GK000013.2:79556311-79580467 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20154 TTCAAGGTCCTGCCGTTCTGTCCCATACCGAGTGTCTGCTTCAGCTACTACCTGGAACCG Gene GeneID:508098|LOC508098:NM_001130749:25_cdna Constitutive 0 NULL GeneID:508098 18 GENE LOC508098 NULL hypothetical LOC508098 EMBV3_00861 ATATGTGAAACAGATCGCCAGCCCAGGTTCGATACATGAGACAGGGTGCTCAGGGCTGGT Gene BVV0102_159123 + 0 NULL GK000019.2:51871278-51911292 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011114 TCONS_00023467 TCONS_00014522 TCONS_00045101 TCONS_00114219 TCONS_00114220 TCONS_00115481 TCONS_00014521 TCONS_00123391 TCONS_00116831 TCONS_00255143 TCONS_00175217 TCONS_00045103 TCONS_00239074 TCONS_00032578 TCONS_00130098 TCONS_00014520 TCONS_00045105 TCONS_00156987 TCONS_00114217 TCONS_00014523 TCONS_00254697 TCONS_00136860 16 XLOC_006665 XLOC_014134 XLOC_008320 XLOC_026347 XLOC_069232 XLOC_069651 XLOC_074945 XLOC_070997 XLOC_158075 XLOC_105000 XLOC_145740 XLOC_018818 XLOC_078809 XLOC_095447 XLOC_157629 XLOC_083071 Coding TCONS_00114217 XLOC_069232 Coding Coding PANK3 20:174956-204785 = TSS85234 10537 1 TCONS_00114217_1 370 0.222454208977887 7 0.64697599570873 0.000334277578695107 0.000208762788881791 0.000186521021985446 0.000346101590581102 2.76227572637789e-07 0.00010046460854436 2.43936471213774e-05 1.42667404143207e-09 0.000747348035711181 7.41930564525214e-07 1.28872646726134e-17 9.57543751931377e-05 5.70564407331198e-05 6.71618151294377e-08 8.94140235461078e-05 0.00751440079620431 0.004865067653108 0.0054877842476121 3.00750681851999e-08 0.000357795648990333 8.84003588409653e-05 0.0038094312881925 0.00586215829632341 0.00713113713225519 0.000411608012053879 0.00031219405665108 0.000305619638527887 0.000768717690611786 0.000461181680588754 0.000750398012749774 XM_005221378.1 PANK3 PREDICTED: Bos taurus pantothenate kinase 3 (PANK3), transcript 0.0 7705 100.00 0.405333586409794 NM_024594.3 PANK3 Homo sapiens pantothenate kinase 3 (PANK3), mRNA. 0.0 2608 86.42 0.208313561734839 TCONS_00114217_1 sp|Q08DA5|PANK3_BOVIN PANK3_BOVIN Pantothenate kinase 3; 0.0 764 100.00 0.997297297297297 1 coding 0 0 0 0 0.0339391441367436 0.81249793091872 0.0640156913591383 0.224603367186955 GGTTCTCCGTGCGGCGGCGGCGGCTCAGGGGACCGGGGCCTTTTGTTTGGAGCGGCGGCGGGGGCCCCGGATCGGCGAGGCCGGCGGCCTGCCCCTACTTGCTCGGTCCCGGCCGCCCCTCTAGGGGGTGGGGGGCCGCCCCTTGGGCCGGGCCTAGCTTTAGGCGCCGCCGCCCCGCCCTTGGCCCGCCCAGCCCGGCCCGAGGGGAGGAACTGGCCCGGCCTCCCCGCGCGGCCCAGAGCCACCTCTGGAGTCGTAGCTACTGCCCTCCGCGCGCCGGACTAGAGGCTACCCCTCGCCCCTCAGGCAGACGCCATGAAGATCAAGGATGCCAAGAAACCCTCTTTCCCGTGGTTTGGCATGGACATCGGGGGAACTCTGGTAAAGCTATCATATTTTGAACCTATTGATATCACAGCAGAGGAAGAACAAGAAGAAGTTGAGAGCTTAAAAAGTATCCGGAAATATTTGACTTCTAATGTAGCATATGGATCCACTGGTATTCGGGATGTACACCTTGAACTGAAAGATTTAACACTTTTTGGCCGGAGAGGGAACTTGCACTTTATCAGATTTCCAACCCAGGACCTGCCTACTTTTATCCAAATGGGGAGAGATAAAAACTTCTCAACATTACACACGGTGCTATGTGCTACAGGAGGTGGTGCTTACAAGTTTGAAAAAGATTTTCGCACAATTGGAAACCTCCACCTGCACAAACTGGATGAACTTGACTGCCTTGTGAAGGGCTTGCTGTACATAGACTCTGTCAGTTTCAATGGACAAGCAGAGTGCTATTATTTTGCTAATGCCTCAGAACCTGAGAGGTGCCAAAAGATGCCTTTTAACCTGGACGATCCCTATCCGCTCCTGGTAGTGAACATTGGTTCGGGAGTCAGTATTTTAGCAGTCCATTCCAAAGACAACTATAAACGAGTAACCGGAACAAGCCTTGGAGGGGGTACCTTTCTGGGTTTATGTAGCTTGTTGACTGGCTGTGAAAGTTTTGAAGAGGCTCTTGAAATGGCATCGAAAGGTGACAGCACGCAAGCTGACAAACTCGTCCGTGATATTTACGGGGGAGATTATGAAAGATTTGGTCTGCCTGGCTGGGCCGTGGCATCTAGTTTTGGGAATATGATTTATAAGGAGAAGCGAGAATCTGTTAGTAAAGAAGATCTAGCAAGAGCTACTTTAGTTACTATCACCAATAACATTGGTTCTATAGCACGAATGTGTGCTGTTAATGAGAAAATAAACAGAGTTGTCTTTGTTGGAAACTTTTTGCGTGTCAATACTCTCTCAATGAAACTTTTGGCATATGCACTGGACTATTGGTCAAAAGGTCAACTGAAAGCGTTATTTCTGGAGCATGAGGGATATTTTGGAGCAGTCGGTGCACTTCTTGGTCTGCCAAATTTCAGCTAAAGTATCAGGTTTATCTCTGCTAATGTCATTCAAGAGGATCTGAAAACCAGAGGCATTATTACTGAGTTATTTTTCACTGGGAACCAAAGGATAAAAGAGTAGCACTCTTCCTGTTGATTTTTAAATGTCAGAATGGTAAGCTGCTAAATGTTGCCATGTTAAAAAGAGAGCTCCAGTAACATGAAATATTTCTAATTGGATTGCTTTTCTTTCTGTATATAGCCAGTGTTAAATCCTTAAATGCAATACAGCCTCTGATGATTGAGCTTCCTCTCAAAAAGACTTTCTATTTATTTTATGTAGCCAGCATTGCAGTACTGTATGTTCAAACATGAATCTTAAAGTCTCAGAAATGTTTCACTCATGAAAATAATTGATTCTGAATATTTGTTACAAATCTGTTCTGTGTGTGTTTTGGTTACTAATACATGGATAGTAACATACCCTGTGTGGAATCTTACTGAAATGGCAATTAGAAATGATCGTTTTTATGTGATTTTAGAAATGTTAAAGAAATATTAATTATTCATTATTGTTTTCCAAACATATCTTCTCCCAAAAAGTGTGTTTATGTGATCTACCCCCAGAAGTATAAGCTCTTTCAAATGCCATAATTTAATAGAAATACTATTGTTAAACTTTACCTGGAATTTCAGAGTGAACCCTAGGAAATCACCACATAATTGGTGATACTGCATTTTTTGTATTTTGATTATCAGTACATATATATGTTTATCAGTACATTTAAAAATGATTTTTAATTGGAGGCTTAATTACTTACTTGAAAATCTGTTCGTTGAGGTTCCAGAATGCTTCAAATGGGGCGTAGTTAGTTTATGTGTATTGGTAGGGTTCTGTGCTCTTTCTACACCACATCTATCTTAGGCCCAGAGTTAGCCATTTCTGTTTACTTACGTCTGAAGCATCAAAGCTAAAGACTTTCTTCTTTTATGAGCAGCAACAAAATCATTTATTCTAAATGGATGTTAAGGAAATCTAAAGGTCAATGGTTTTGAAACTGGGAATCTGAGGCAGTATTGCAGAATTATGAAAGGATCATTGTATATTCTGGTAATAAAAACATAGTTCCAAAATTTGTATATCCATTTGCCTTGGAATTCTATATTTTGAAGTCATTTTTAAATAATGCTATAAATTTTTTCAGATGTTTACTTTTGCAGTAACGTTTTGGAGATCCAATAATAGTTCAGCGAAGTTTTCTGAGACTGTTAGTGATGATTTTAGGTAGTTGAAAGACTTGGGGAAATTAGGAAAAAATAATTCACTTCCTTAAATTACATCTGGATGTAATCTGGATGTATTTTGAAAATCTGGATGTACTTTGAAGAGTTTAAAACTTGTTTACAGAAAGGAAGAAATGTTACAGTGTGTTTTTACAGTACAGTTTTGCTCCATAAAGAACAATTTTCAGTTGACTCTCAAGAGCTGCTTGATAAAGATATTTCTCAAGTTTTGCATTCAAATACTTAAAATTCAGTTTTTCTTTCTCTGTAGACATGAACATATGAATAAGAGTAATGTTCAGAGGGGAAAGCATGTGAAGGTAATTTTTTAGAATTTAGAATGTTTGGAACTTTGAATTCATTTCAGTCAGTGGTCATTTTGAAAATCTATAATGATTAAACATTTTCTGCTTAAATGTTTCCATTTTGTGACTAGATATTTCAGCCAAAAGCTATCTGTTTATTTTAGAATTTTGTGATTTGGGTATCTGTACAAAAAGATTTTGCTTTAAAATGATAGCTTTAAGTTTTACACTTGTGACAAATCGTATGTTAGCAGTTACAGGTTTGGGGCTGTCTTTAAAAGAAACGGAATGGTAAAAGTATATAAAATTTAGTTTGATCAATACTTTGGTTAATTTGGGACTATGATTCATACTTTTTGTCTTTTGAACCTGAAGCTCTGCCTTCTAAAATGCATATAAAGTGAACGACTTGGCTTTTCTCTTGTATAGTCTAGAATGACTGGAATAACTAATAAGTATTTCTAATAAGAACATAGAGTTGTGATGAAGGCTGCCAAGATTCTAGTTTTTTATTACAATCCCAAGAAAATGCTTGTAAGCATACAGTGGTAAATAGGTTTGGTTCTAATCCCAGTCAACTTAATGCTGCAGAGCTCCTAAGTACTTGAACAGTGCTAATAGAAATCAATATGAGAAATCAATGTCTAGTAGACACATTTAAAAAATAAAACGAAACAGATGAGATTCTTTTAAATTAAATATTTTTATTTAATGCAGTGTATGTTACCATTTCAACATGTAATACATTTAAAAAGTTACCTAGGAGTTTTTTAAAGGATTGTTGCTACTTAGTCTTCAAAGTCAGCATATACTTCACACTTATAGCACAACTCAGTTTAACCTATTTCAAGTTTTCAGTAACCACATTTGAGTAGTGGTTATTGTACTAGTGTAGTTTCTGGAACTAGCTCTTAGAACTATGAATATGGGAACCTAATTTTTAAAAAACAAAAAGAGGGAAAAGAAGTACCTTGTTTGGCCTAGTTTATTTTACTCAGGCTGTATTTCTGACCATTCCAAAAATTATCTTACATTGTATCCTGCCATCTCATTATAGTATGTATCAGTCTTCTAATGATACTAATAAAATAACCCAAGACACATGCCTGCCATCGTCATCAGTCTGTCAAAATATGTATTTCCTTCACTGAAGTAAATGTGATGATTCCAGTGTCTTAAACTCCCCCCGCCCCCCCGCCACCCCTGACATCTTGTCTAACTGAACTTTGAGAAGCCAATTCTAAAGAACTAAAAACAGACCCTTTTAGTTCTTCATTGAGTTCTGTACACACAAAGAGAATCGTGTTTATAAGTTTGTCTTTGATTTTCGTTTTTAAACCCCGGCAGTAACATTTTCAAATGCAGGGGGCACTGCCAGCTTGTTTTGGGGCTGCGTGAAGAGCACAAGGTCTTGAACCTTCCACCACCACTACCACCATCCCTTCCCATAGAAGATTACCTTTTAACTCGACTTGGAGAATTAATGGCCTTCTGTTCTACACCCTAACTTCTCCCAAGACAGCGTACTTGTAGACCTCCTTGTTTCTTGACATGGGTGTCCCCTACTCAGCTGCTGTAGTTTAAATAGGTGGACTGTTAGTTTAGATAAAGTTAGTGCCATCGCCAGTGATACATGTGGTGTCTTGACAGTCCTTCTAGAGGTTCAGATTGTTTGCCAAATGTTAGACTTTATAAAGATTCCTGAATTTTTTTACCTTTGCGTGCAAATGTGTTTGTTGTACTTTAAGTACCAGTTCCTGAAAGACCATTTCTGTAAGAAAAATTATGTAGCTCAGAGGGAAGAGGTTTCTTCTATGTTCAGTGGTACTCTTGCCTTCTAAGAGCAGTCCACCACATCTTGCCTTGATTTCTAAGATTACATTCTTGGGTGGAAAGCTTAGTGAGGCAATAGTTTGCAAATGTCCTTTATAACCACTCTGCTGATTATATGCAAAGTTTTTTATATCTTGTTTATTTTTTTTCTGTTGAGCACTTTATGCTTTTTAGTCTGTTGCATTTGAGAGTGGTTTAGAAAGTTTTTCTCTTCTAAAAGCCATGTAAAAACCGATAAAGGATAATCACTAGAAAAATGAGTATGTATTATTTTGTATTTAACTTATTTGTTTTGTGGTATGTATAAGCAAAATATTAGAAATGTACTGCATTTTTGTAATAATACTTTTGACCTTAATTTAACATGATTTTCATGAAATGTCTCTGATGTCCTATTTTCCCAATAAGGTTGATTAGGGTGTTTTATTGTAATATGGAAGGAATTCAGCCAACTGTGTTTCTGTCATGAGATAATAATCTCAGAAAGTAATGTGCTTTATCTATATTACTGCCTGTTTTCAGTATTTGAGACAGTTGCTTTATATTTCTACTGAGCCTAGTAAAAGATTAGCAAAGGCCTCAAAAAATGAGTAATTTTTTTAAAGATATTTTAATAACCTATTGAAAATAATGGTTCCATGAAAAGTAAACCACTCCATCTTTTCAGACATATAATTTTGTTTTAATTTATTGTAATTGGAGGCTAATTACTTTACAATATTATGGTGTTTTTTGCCATACATTGACTTGAATCCACCACAGGTGTACATGTGTCCCCCATCGTGATGCCACCTCCCACCTCCCTCCCCATCCCATCCCTCGGGGTCATCCCAGTGCACCAGCCCTGAGCACCCTGTCTCATGCATTGAACCTGGACTGGCGATCTGTTTCACATATGGTAATATACATGTTTAAATGCTATTCTCCCAAATCATCCCACCCTCACCTTATCCCACAGAGTCCAAAAGACTCTTCTTTACATCTGTGTCTCTTTTGCTGTCTCACATACAGGGTGATCATTACCATCTTTCTAAATTCCATATATATGCGTTAGTATAGTGTATTGGTGTTTTTCTTTCTGGCTTACTTCACTCTGTATAATCGGCTCCAGTTTCATCCACCTCATTAGAACTGATTCAAATGTATTCTTTTTAATGGCTGAGTAATACTCCATTGTGTGTATGTACCACAGCTTTCTTATCCATTTGTCTGCTTATGGGCATCTAGGTTGCTCCCATGCCCTGGCTATTATAAACAGTGCTGCGATGAACATTGGGGTACACGTCAGACACATATACATGTTCAGTGAGTTCCACTTCCACAAGTTTAAATGCGTTATCTATCTCGTGTCTTCAGTGGGTGTGGGATCATAACTTGGCATTGTATTAGAAATAGCACCAGGAGCTGATGTAACGTCTTTGAATGTTATCTTATTTGTGAAATGAAGGTTTAATTTGTTAACACTGGGGAATGACTGGATAATCATCAGGATCCTGAGAAAGATAGTTGCTCCATTCATGGAAGCATTTGAGATGACAGCATTTGAGATTGTTCAGCTATGTGGCATCATGTTTTATAAAGTTTGTTTTATTTGTATCTGTTAAGAGATACTAACTTTTGGATTCTCACTAACAGAATGGTATTAGTTTTGTTATTGCCTGTAATGGCCAAGTAATAGATACACCTTAAAGTACTATCAAGGGGTTTTATATATATATATATATATATATATATATATATATATATAAACGTGTGTATATGTGTGTGTGTGTGTGCTTTAATCTGTAAAGCTATCTAGGATTTTATTGTGCTATAACTTCAAAATTATATGGGCATTATTAGAACTTTTACATTGTACAAAAAGAAACATACCACTAAATTTATGGATGTTTGAATGTTAAATACATTTGGGATTTTCTTCAGTAATCCTTTTCTTTAGTGTCAACCCCCTGGACTATAGCCCACTAGGCTCCTCTCTGTCCATGGGATTCATACTGGAGTGGGCTGTTATTCCCTTTTCCAGAGGATCTTCCCGACCCAGGAATCAAACCCAAGTCTCCTGCATTGTAGGCAGATTCTTTACCATCTGAGCCACCAGATTTTTGATCATTTTGAGTGGATACAGATGTGGGATAAACCCCTCCTAGAATTATTTATTGCTTTTGTCAAACACAATTCATAGTGGGATTTATAAAACGCAATGTTAATAACCTGTGAGTTGAAATATAATGGATTATAGTTATCTACATCAAATCTGATAAAGACCTAAAATACCTTTATCTTTTGGATTACCTGAGAATAATCAGACTGGGCGTGTATCTGACATTTCCAGCTTAATAAATTTAGCAGTGAGTTGATTTTGGGACTTCAGGTACTACAATTGGTACTGAATGATGTGTTTGAGAGGAAGTCAATTTTTTTTTTCCTTAAGAAAACCCCCTAAGTCTTAACATTCTGGCTCTTTCTGTAGTCAAGAGGTTATCTCTCTTTTTAGATTTTCAGTCTTTTTTTGCTGTAGCTGCCGTTAATTTTGTGTTTAAAGAACTAATGAGGAATATATTTTTCAAAGGAGTGAATAAAGTTAAAATTCAAGATTTTGAATTGTATAAATATGCAACTATGTTTCAAGATTTGCTGTTTTTTTTTTTTTTTTTCTATTTCTTAACATCTTCCATACATTGCAGTGCTTACAGTTTTCAGTAGCTTTCAGAGAAAACATTTCAGTTTTGTATAGTTTGTGGAATGTACATCAGTAATGCAGATCGTCTGAGATTATTTTAGCTATACATCGTATCTGAATCATGGATCTCATTCCTAGCAAAGTAGGTAGTCAGCACAGGTTTTAAGCCATTTTGAAATCTGCTGCTTTTTTCTGAGGTGCCCTTTTTAGTTAACATTTAGAAACAAAAGATAACTATATAGACCTAACATCATATTCTGGTCTCCTTGTCCCAAACGTAATTAATGGAATATGGATGTAAGTCAGGTTAAGATGTTTTGTCATTTTTTAAAAATACATTGTGTGCTCTGACTTTTTATTTGAACTAAAGTGAAATGATATAATGATTTGACTTTTTAACTGAAGTTGAATGGTACTTGTCTTAATTCTGTCCACTTACAGAGTCGAATCATACCTAGAATATGTTTAATTATACAAGCCATTTCCATTTCAGTTGCCTTATTCTGTCTATTGCATTGTTCTTGCCAAGTCTAACCTCTGTTATGTTGAAATTATTCTAACACTGAACCTGTGATGTAAAAATGTATGATGTGCTACAAATTTTATTCATAATAAACTAAGTTATAGCCTATTGTAACCTATAAAACATTTCTTGTAAATCATCTAATTTATTTTTTCATTTATGTACAGTTTATGTAAAAATTTAAAATATTTGTTGTGATCTGTTCTTTAAACATTCCCTTTTTCTTTTCCTTAAGTCTTATCTGCATGAAGGAAACTTGGGTTTTGCTTGTTGTATTAATTGGCCAACTTAAGTACTCTCTACCTTCTTTTCTATAGTTTAACTTTTTCTAGTATTGTTCATATTCTAAATAAATGTTAAAATCATGCTTTTTATTTCCTACTTGGCAAATAAATTCTCTAAGTTATTTACCATGTTATCTTTTTGTTTCTTTATTTTAGGTATTTTACTCCCACATTTCTACTTCAATTAAATACAAGGTTTTAACTGAAATTAACTACAAAGATCATCTGTAGTTGAAGGCTACATACATAGTTTTAAGTGTTTCATTCAAAATAAATTTATTCCAGGAGGGAAAGAAAGGTCTTATGTTGGCTTTTATATGTATAGCTGTATACATTTTGAAAGGAAGACATCTCTTTTCTGTTGACATGTTCTTTAAAGGCTTGTATTGTGTATTGAATATGGTTAATTTTTCTGCACCTAAAAGTCTTGATAATCTCCTATGCAAAAAGCTTAATAAACTTTTAAAATATTGCTATGCTTCTGGTTATAGGAGTTTTTAAGTTTTGTTTTCTAAAATAAACTTGGAAAACCTGACTCCTGTATTTTAACAATTTTAATAAAGAGTCCTGATCCCCTGTGTTTTCAGATTTCTTAGACACCTCTTCAGGTTTTCAGGACAACTGTTTAATACCTCAAAAAATGTATTTCAGTGAATTTTAAACTACTGGTTTTTGTTTAGTTTTTGATCTCTTTTTTGTAATCAAGTTTATTGAGATATGGTTTTAAGTACAATAATATATATGTGTGTGCATATATAAATGTTTATTTGGCTATACCAGCATGTGTGATCTTTAGTTGCAACATGTGGGATCTGGTTCCCTGACCAGGGATTACAACTGGGCCTCTCCCATTTAGAACGCAGAGTCTTCCCTGGACCACCAGGGAAGTTCCTGAAGTACAGTAATACTTCACTTCTTACGATTAAGTGAATATGATAAGTTTATGTACTCACGTAACCAGCCCTCCAAGATACTTCCATCATTCCAAAAAGTTCTCTTGGCCTCTGTCCTAGGCAGTCCCTTTGCCACCCCATCGCCTGCCAACCACTGATCTGCTCTGTTACTAGATTCAGTTGATTTTCTCTACAGTTGTCATGTAAGTGGGCTTGTACAGTATTTACCCTTTTTTCGTTTCCCAGTCCTCCATTCCTCCCACCTCTAAGGCTTTCTAGAGCTACTACAGGCAGACCTCAGAGACATTTTAGGTTCTTCCTAGGCAACTGCAACACAGCAAGTTACATGAATTTTGTTTCCCCAGTGCCGTGTGCAGTAGCATTATGTCAAAAAAAAAAAGTGTGAATACCTTAATTTTAGAATACTTAATTGCTGAAAAATGCTAACCATCGTCATCTGCATCTTTACTGAGTCATAATCTGCTGGTGGAGGGTCTTGCTGCAATGTTGATGGCTGCTGACTGATCAGTGTGGTGGTTGCTGAAGGTTGGGCTGGCCTTGGCAATTTCTTAAAATAAGACAACGGAAGTTTGGTAGCACTCTGAAAAGTGAAAGTTGCTCAGTCGAATCTGACTCTTTGCAATTCCATGTGCATGGAATTCTCCAGGCCAGAATACTGGACTATTCTGAAGGAAGGTAGCCTTTCCCTTCTCCAGGGGATCTTCCCGACCCAATGATTGAATCCAGGTCTCCCACACTGCAGGCGGATTTTTTACCAGCTGAGCCACAAGGGAGGCCCAAGAATACTGGAGTGGGTAGCCTATCCCTTCTTCAGCAGATCTTCCTGACACAGGAATCAAACCAGGATCTCCTGCTTTGCAGGTGGATTCTTTACCAACTGAAGTATCAGGGAAGCCCACGGTGAAATTTCTTTAAAGTTGGAATCAGTCTTCTCAAGCCCTGCCACTGCTTTATCAACTAGGTAATAATTCTGAATGCTTGGTTGTGGTTTGAGTAATCACTAGGAATAGATTCTATCTAAGGAAACCACTTTTTCCTCATCCATAAGAAGCAACTCTGCATCAACATTTTATCATGAGAGTTCAGTGATTTAGTCCCATCTCCAGGCTCCACTTCTGTTTCTCTTCTTTCCACACATGGTGTTTATACACACTGGCAGTTACTTCCCCTCCCCACCCCTTGAAGTTTTGAACCACTCAAAGTCATCCATGAGGATTGGAATCAACTTCCAAACTCCTGTTAATGTAGATATTTTGAGCCTTTGCCATGAATCACAAATGTTCCTAATGGCTTTTAGAAAAAAATAACCATTCACACTATGTCAAC EMBV3_40612 TGGAGATTTCTAAAAAGCATCACCGCCCACCAAGCTGTAAAGGCGACAGCACTTAGGAGG Gene BVT0102_020979 + 0 NULL GK000013.2:70481491-70491294 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049912 1 XLOC_030043 NonCoding TCONS_00049912 XLOC_030043 NonCoding NonCoding - 13:70488133-70489610 - TSS37088 1477 3 TCONS_00049912_3 76 0.201083276912661 1 0 0.000359256274940591 1.36065382984817e-05 8.14501624509893e-05 0 6.68542163948786e-06 0 0 7.60864621204864e-05 0 8.35710633419707e-06 0 0 1.94264196978097e-06 0.000697477546674417 5.31477178051061e-05 0.000321874729249579 0 0 2.42753665285629e-05 2.43448239973572e-05 9.04347310959032e-05 1.00483119040073e-05 0 0 0.000211091125503753 4.77011561781468e-06 0.000198346425234647 0 0 0 XR_248935.1 LOC101927117 PREDICTED: Homo sapiens uncharacterized LOC101927117 (LOC101927117), misc_RNA. 1e-14 86.0 74.68 0.0988490182802979 0 noncoding 0 0 0 0 -0.0601887872517797 0.710228621166506 0.0113992691996429 0.844907120692141 GGTCACACCCTCGGCTCGCCCTGCTTTTCCTGAGTCTCCTTGGGTGGAGGCAGGCACCTGAGGCCTGGGATGCCGGCTCAGAAGTCCCAGGAGGAAATGGGGCCCTGTTTCCTGATCGAGGGCCTGACAGCAGGCTGAAAACATGAGCTCCTGTTGGCAGGGATTGCTGGAGCCCCTGGAGGCCCGGCCCCAGAGGCAAAAGCAGAAGCCAGGAAGCCCGGGCTACATGTCGGGAAGCTCTCAGAAAATGGAGAAATGGAGATTTCTAAAAAGCATCACCGCCCACCAAGCTGTAAAGGCGACAGCACTTAGGAGGCCTCCTGGGAAAATGGATAAGGTCCGATGAGCAGGGAGGGGCCCAGCTAGCTCCCCTCCTGTCTTCCTGGCCTCACCAACCCCTCCACTCCACCTCCCCTCTCCGTGCTCCCTCTTAGTAAATTCTAGCCTTCTTTCCATTCCTAAACTTAACTAAGCTCTTTCTGGCCTCAGGGCCTTTGTATATGCTGTTACCTTGTTTAGAAAGGACTTTCCTCCAACCCACCCCTAATAATACAGCCAGCCATCTCCTCACATCCTTCCAGCCTCTGCTGAGTCCCACAGAGGTCTTCCTTGTCTACTAGATCTGAAGCAGGTCTCCCTAATGTGTTAGCTCATAGCCCTCTGTTTTTTTCCTCCATCACAATTGTTCCTACAAAACAGAGTGCTTACCTGTCTTAAATCTGTGAATTCCTTGGGGCCCAGTGCTGAGTTTCTCTTGTTCTTCCAACTCATGGCACTAACACTGAGCATAGGGAAGCTCAAGGCTGTAGACAGGGACAAGCACCACAGCAAGCCCCAGCAAGCCCAAGCCACACACTATGAGCGCTCAAGCTCTGCACTCACGCTTCCTGTGCCCAGGGCCAGCCATGCCAAGGGCCTCCCCTCACCCTTGCTGAGTAGCCAGCTAGCCTATGTGCCCACTGTCCACCGGCACCTAATGAAGCTAGAGGCTCCCCTGTGAGGAAGAAAATGCATGGTCAGATAGATTGGGGTTCAAATCCTCACTGGTTAATTATGTGGCCTTAAGGCAAGCCGCAGAACTTCTCTGAATCTGTTTCTCATCAGTAAACTGGGAACAATAATCCCTGATTAGAGTAATTATAAGGATCAGGTGTGACCACATGTTGCAACCCTTGTAATGCTGGGCCGGGCATTGGGTCAACTTTCATTCCCTCCCTCTTATTTCAAAGGCCTGCCACTAGGTGGCAGTCCATCTCAGCCACGCCACCTCCCCTTGGGTGACCACAGCCAACCAAGCACAAACAGCTGCCTCAACCTCAGGCTCAATCCTCAGGTCCTTGGGGGCTGCACTTGAGGTGATCAACACACATACACATGCTACCACTACAGCAAGACAAGTCAAAGGCAGTCCCCAGACATTAGTCATCAGCCAGCTGGGTGGCCTGCCTGAGCACATACTCTTATATACGTACTCACA TCONS_00043758 TCONS_00043759 TCONS_00043760 TCONS_00043761 TCONS_00043762 . 5' 1685 TCONS_00043758 TCONS_00043759 TCONS_00043760 TCONS_00043761 TCONS_00043762 . 5' 1685 EMBV3_02564 TGTCTCTGACCATAGAGAGTGCCTGGGTAGCTTGGAAAAGTAACATCACCTGGCCATCCC Gene GeneID:540561|TTN:XM_002685260:62_cdna Constitutive 0 NULL GeneID:540561 2 GENE TTN NULL titin EMBV3_02083 AAATAACCTTTGAGGATTTCAATGAAGTTGTAAATCAAGAGGAATTCATTGCTATTATGA Variant GeneID:532953|CETN3:NM_001075976:12_cdna 352^543 1 EMBV3_02446 GeneID:532953 7 GENE CETN3 MGC142353 centrin, EF-hand protein, 3 (CDC31 homolog, yeast) EMBV3_18290 AAACTGTGCAGAGCCCAGCATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGCCTGCTA Gene GeneID:767923|FMC1:NM_001076997:739_cdna Constitutive 0 NULL GeneID:767923 4 GENE FMC1 MGC128432 formation of mitochondrial complexes 1 homolog (S. cerevisiae) EMBV3_33150 ATAGAAAACGACAACAACAGCAACCGTGCCAATGGTCAAAGGGACACATTCCACGTGGCC Gene BVT0101_058179 + 0 NULL GK000021.2:62560509-62701849 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34628 ACAATTCCACCAGCTCCTTGGGCATCAGCACACCAATCAATGGCTCTCCGGTCTGCCTGG Gene GeneID:618180|FFAR1:XM_002694932:24_cdna Constitutive 0 NULL GeneID:618180 18 GENE FFAR1 NULL free fatty acid receptor 1 EMBV3_13910 CCACAGGAAAATATAAAATAAACCTGGAGCATCTGGTAGTGCCAGGAAGTAAGGAAGTGC Gene BVV0102_153639 + 0 NULL GK000001.2:78283421-78593536 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32234 ACCGCCATGGGCATACGTGCTTGATGATCTCATGTTACAAAGGACACAAAGAGATTGCTC Gene GeneID:541180|FEM1C:NM_001101219:42_cdna UTR3_Alt 2 NULL GeneID:541180 10 GENE FEM1C NULL fem-1 homolog c (C. elegans) EMBV3_05483 ATCGGACACATCTTTGGCCTCCGGCACTGCCAGAGACCGGTACAAAGCACTGGTCAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14139 CTTCTGCTTCTCCTCTTCTTGCACCTGTCGCTGCTAGGATGTCGTTCGCACCCGGTGGGT Gene GeneID:508734|NPPB:NM_001166570:52_cdna Constitutive 0 NULL GeneID:508734 16 GENE NPPB NULL natriuretic peptide precursor B EMBV3_39959 AAGCAGCCAGGTAAACAATTCCAGGACAGTCTGATAAGGGCCGTAGAGGAGTCCGAGCAA Gene BVT0102_216978 - 1 EMBV3_41517 GK000027.2:25556382-25637685 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155320 TCONS_00155319 TCONS_00155321 1 XLOC_094691 Coding TCONS_00155319 XLOC_094691 Coding Coding RBPMS 27:25636742-25816022 j TSS116228 1052 1 TCONS_00155319_1 115 8 0.994176674345573 0.00408128840942058 0.00353744456683672 0.0023947637525638 0.00356306940756979 0.00251835076366266 0.00100365246280927 0.000545243769801891 0.00246170591759574 0.00294139777624293 4.2733222754065e-05 0 3.62427085864735e-65 0.000737374964507136 0.000281803732303945 0.00112872596322461 3.1507089154791e-160 2.34388543081277e-276 2.03049114422714e-66 0.00275876492240189 0.000931000206552182 0.000322476915836766 1.84521294757587e-32 6.46539282645901e-05 2.80165840365605e-221 0.00403963543215041 0.0012450847061459 0.00111871292015772 8.94234956873182e-05 3.43997007634193e-05 9.45701748015597e-192 NM_001046535.2 RBPMS Bos taurus RNA binding protein with multiple splicing (RBPMS), 0.0 1155 92.24 0.733840304182509 NM_001008712.2 RBPMS Homo sapiens RNA binding protein with multiple splicing (RBPMS), 0.0 955 85.64 0.733840304182509 TCONS_00155319_1 sp|Q93062|RBPMS_HUMAN RBPMS_HUMAN RNA-binding protein with multiple splicing; 1e-42 142 97.26 0.626086956521739 0 coding 0 0 0 0 0.00309123603939998 0.97982223450493 0.000904148763697585 0.984089626232975 CGTTTTCAAACTGCCATAGGATTCAAAAGACAAACAGGGCCCGGTCTTGTCTTCCAAGAAGGATCTCCCGAAAGGGTGAGAGAGGCAGCCAGGTAAACAATTCCAGGACAGTCTGATAAGGGCCGTAGAGGAGTCCGAGCAAGGGTGGCCGGAGAAGTTTCGGAGGACCCGGCGTGGAGGTGGGGTTTGAAGATGCGCCCTGAAAACGCCGGCCCGGCCCGGGCTGCCCCCGGACGTCACCCCAGTTCCCGCATCCTGTCATTACCAGCTGCCCACTAGGTCCGGACTCTCTTTGTCAGCGGTCTCCCTCTGGACATCAAACCTCGGGAGCTATATCTGCTTTTCAGACCATTTAAGGGCTACGAAGGTTCTCTTATAAAGCTCACATCTAAGCAGTGTACCAAAAGGTGATTCGGTTCTCTTTGCATTTTAAACGATGAAGATGCTGAGCCCGTAGGTTTTGTCAGTTTTGACAGTCGCTCAGAAGCAGAAGCTGCCAAGAATGCTTTGAATGGCATCCGCTTCGATCCTGAAATCCCGCAAACACTACGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAAGAACAAACTAGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGAGAGCCATATGAGCTCACAGTGCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCAGCGGACTTAGCGCCTGCGCTGCCTCCTCCTGCTTTCACCTACCCCGCTTCACTGCATGCCCAGTGTTTCTCTCCTGAGGCAAAGCCCAACACACCTGTCTTTTGTCCACTTCTCCAGCAAATTAGATTTGTCTCTGGGAATGTGTTTGTAACATATCAACCTACTGCAGACCAGCAGAGGGAGCTCCCATGTTGAATTTGCTTGTTAGCTGTTTTTTGTTGTTGTTGTTTGTTTTTTCCCTTCCCTCCCTTTTGCAAAAACTATTTCTTGGTAACGTTTGAGAGATTTCAATAAAAATTTTAATTAGAGCAAAAATGATC EMBV3_34909 CTGTGTGGAAAAATCATTCAACTGGCATGCCAAGTCCCTGTGGAAGGAAGAATTGCTGCC Gene GeneID:407127|BMPR2:XM_002685492:236_cdna UTR3_Alt 2 NULL GeneID:407127 2 GENE BMPR2 bmprii bone morphogenetic protein receptor, type II (serine/threonine kinase) EMBV3_33371 AGTCACCCCTGGGTCCTTGCTTCCCCTTGCCTTTTTCCCACCACATACAATTCATCAGGA Gene BVV0102_131666 + 1 EMBV3_26474 GK000017.2:55873789-55899387 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080896 1 XLOC_049778 NonCoding TCONS_00080896 XLOC_049778 NonCoding NonCoding - 17:55885697-55886021 - TSS60836 324 2 TCONS_00080896_2 62 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000391999388817945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0147936398267981 0.895195512902845 0.0250841785132222 0.715375481443183 CTCCATGCCCAGCTGTCTCCTGACCTTGGAATTTCTCCTCAGCCTGGCCGCCTTTAATCCGCTGCCCTGGCTTGTAAAAGCCTTTTAGACTGAGGGCATTTATTTCCCAGAGAACTATTCCAGCCTAATCACATAAAAATGCCCAGCATCCCAGGAGCAGACTGTCAAGTGCAATGTGGTTCTGTGGTTCTCTCCAGAGGCCCTGGAGAAGGGGAAATTGGGGTGCTGATCATCCTAGGAGTCACCCCTGGGTCCTTGCTTCCCCTTGCCTTTTTCCCACCACATACAATTCATCAGGAAACCCACATTTTCTTAAAATCTCAG TCONS_00077458 . 5' 11865 TCONS_00077458 . 5' 11865 EMBV3_23036 ACCTGGATTGCAGTTTGAGCACCCTTGAAGTGCCCCGCTTTGCTCCCAAGAAAGACAAGA Gene GeneID:519277|IQCH:XR_083769:542_cdna Constitutive 0 NULL GeneID:519277 10 PSEUDO IQCH NULL similar to IQ motif containing H EMBV3_21575 AGATGCTCAGACAGCTTCCAAGACAGAGTGGCCAAGAGGGAGAGAAAGGCAGCAAGAACA Gene GeneID:100336507|LOC100336507:XM_002690250:77_cdna Constitutive 0 NULL GeneID:100336507 9 GENE LOC100336507 NULL trace amine associated receptor 8-like EMBV3_36640 AACACAGGTCTCGGTGTGTATGTGAGGCAGAGTCCGCAGAAGATGAATCGCTGGTTGCTT Gene GeneID:538365|SLC35F3:XM_002698792:161_cdna Constitutive 0 NULL GeneID:538365 28 GENE SLC35F3 NULL solute carrier family 35, member F3 EMBV3_11738 ATCAACCTGTCAACTTTGGAAGTAGGAAACACAGAAGTAAATGGGAAGGGGGTCCGTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40213 GCAGCAATTTAATCCATTGTGGTGTTGATGACGAGTGGCATCCTTCTCCTCCCACTTGTG Gene GeneID:506707|LOC506707:XM_002693872:141_cdna UTR3_Alt 2 NULL GeneID:506707 16 GENE LOC506707 NULL similar to complement component 4 binding protein, alpha chain EMBV3_33792 GAAGCCTTGCGGGCTTTAGTATTTACCACCATCACTTCAGTGGCTCCGTGCAGCTAATGT Gene BVV0102_395407 - 1 EMBV3_04341 GK000003.2:59280290-59303475 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31558 CTGGGTGTTTGTGAGTCTGAAATTTGAGGGCCAGGAACCCAACCTAGGAACATCCAAGAC Gene GeneID:100297147|LOC100297147:XM_002687785:53_cdna Constitutive 0 NULL GeneID:100297147 5 GENE LOC100297147 NULL hypothetical protein LOC100297147 EMBV3_36893 CAGAATGAATACCATCCCCCAGACCCGATCCATTCAGTCAAGGTTCCTGCAGAGTCGGAA Gene GeneID:511329|PARP6:NM_001103241:134_cdna Constitutive 0 NULL GeneID:511329 10 GENE PARP6 MGC166370 poly (ADP-ribose) polymerase family, member 6 EMBV3_43276 TTCGTCGTTTCAAGTACAGTTAGTCTCCAGTTTCAGTGTTTGTCCCAGCTTCCTGGGGAC Gene BVV0102_145436 - 1 EMBV3_06281 GK000021.2:59007721-59118851 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00124934 1 XLOC_076477 NonCoding TCONS_00124934 XLOC_076477 NonCoding NonCoding - 21:59063717-59065088 - TSS93693 1371 3 TCONS_00124934_1 62 0.450765864332604 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000616463208240225 0 0 0 0 0 0.000227329136630026 0.00366024598933607 4.89121036356079e-05 0 0 0 0 0 0.000306971244685307 XR_228014.1 LOC100848959 PREDICTED: Bos taurus uncharacterized LOC100848959 (LOC100848959), 2e-17 95.1 80.56 0.0780452224653538 0 noncoding TTTATCATATTGTTACTGAACCCAGGTCCGACTGCTCACCACTCGATAGCCAATTCTCGAGAGACAAGGGTTGGGAGGAAAGGGAAGGAAGCTTTAATTCAGATGCTGGCAACGGGGGGACAAGGTGGACTTGTGTCTGAGAGCCAACTCCCAGTTGCTGCTCGGGAGGCAGACATTTTTAAGGGGGCGTTTCAGGGTTATATGGACAGAGGGTGGGAGCAGGATGGCACAGTCAGCTTAGACAGTCATCTCGATATCGGTGATGATGGTCATAGTTGGCTCCTGCAGTGATCTCAATATTGGTGACGATGGTCACAGTCGGCTCCGATAGTCATCTTGATATCAGCGATGTGGCAGCCCATTCAGCATCATCTTCGTTGTTTCAAGTACTGTTAGTCTCCAGTTTCAGTGTTTGTCCCAGCTTCCTGGGGACAGTTCTTGGAAGTGGAGTGGCTTATGTCACAGCTTTTGTCTGGTCATCATGAGGTCATCTTCTCATCACATAGTCACCTTCTTCCACCTGGTGAGGGGGCTTCAGTATCTGAAAAACAGCTCACAGGATATGGCTCAAAATATTACCTATGACTCTTGAGAAGTAACCAGAGGTCCTTGGCTCTGCCTAGTGATTAGTGTGTTTGGCCTCATGTAAAGGCTTAGAGTGTGAGGCATAACTGAGTTCTAGGGTGAAGGCTGTGCTTACCATATGCTACCACTCCTTACGGAGGCTGTGTTCCAATAGTTCAGCCTATAGTCTAATACAAAACCCTGTGTACACCTGCCGGGGCAGTCAGCATCAGAGAACCCTGCAGTCCAAAGCCAGAGAGCTGGACCTTCTCACCATGCCCATCAAGTGTCCAAGAGACAAGCAGGGCCAGCCCAAGATGGCCGGAAAACAAGGGAGGAGGGAACACAGGCCAATCTATAACACAGGACGTGAAGCCAGTGCAGAAAATATCCAGGGTTCCTGGGGAGCACGGGAGACACTGGCCTCAGAGATGTAAGAGAAGAGAGGTCTAAACATCTCCCCAGGACTGCAAGGGGATCAGGCAGGCAGAGTGGTAAGTGGGAGCCATGGAAGGCATTTGAGCAGGAGAGAGCAGCCACGTGACGGTCATGAACCATCACCCCCTGCAGCAGCAGACTTCTTGGTACATCTTGCCTGGAGCATAAATTGAGACCAGTGGGGCTGTCGGGTACAAAGATCCACATAGATCAGCCGTGACGGGGACTTGTGTCCACAGAAATCCCTCAGGACTGCTCTCCATCAGAACAAGCACAGAGTCAAGGGATTAAAAGAGCCGATGGCCTGTTGGGCTGAGTGGGCATTAACACCCATGAAATAACAGTCTCTGAAGTCACCCAGTCCATCTC TCONS_00119891 . 5' 53764 TCONS_00119891 . 5' 53764 EMBV3_14416 CCTCCGGGGCAGTTCACTTGGCTCTTCGGGAAAGAAAAATAAAAAGGCTTCCCCCAACAA Gene GeneID:786597|LOC786597:XM_002694065:186_cdna Constitutive 0 NULL GeneID:786597 16 GENE LOC786597 NULL hypothetical LOC786597 EMBV3_35771 CGGGGTTTGCCTTGCATAAATGGAGGTGCTGGAATTGGAGGTCAGAGTGGAGGAGATAGA Gene BVV0102_148704 + 1 EMBV3_29201 GK000022.2:36932868-37320347 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126778 1 XLOC_077491 Coding TCONS_00126778 XLOC_077491 NonCoding Coding - 22:37100153-37231517 - TSS94986 1164 2 TCONS_00126778_3 100 3 0.991161894901913 0.00100611490254079 0 0.00016238881808175 1.47544588543031e-84 1.70430385438325e-53 5.56813884001784e-05 0.000161821486588326 3.41199866110491e-05 9.11350176131215e-05 0 0 0 1.77747254846166e-09 0 0.000268300678512452 0 0 3.39219689796323e-18 8.19895893311801e-34 1.45535628473831e-05 2.00881332319952e-48 0 0 0 9.37375559058088e-05 6.88719273034217e-66 2.73502505125788e-86 0 0 0 XM_005196446.1 PRICKLE2 PREDICTED: Bos taurus prickle homolog 2 (Drosophila) (PRICKLE2), 4e-102 376 100.00 0.177835051546392 NM_001081146.2 Prickle2 Mus musculus prickle homolog 2 (Drosophila) (Prickle2), transcript 4e-57 226 90.80 0.139175257731959 0 noncoding GGGCCAGGCGTGCGCTGCGGAACCAGCCGGGGGCAGCGAGGCGGAGACAGGCTACCGGCCGCCGAGGGTGCCCGCCCAGGCGACCCGCCCTCGCGGCCGCGGTGCGGACGGACGAACGGACGGCGCTGCGTGCAGGAGGCGCCCGGCCATGTTCAGCCGGAGCTCCCGGAAAAGACTCTCCAGCCGCTCGTTGACCGGACTGGGGCGGATCGAGAGAGGCCAGCCATGTAATGCCTGTGGTGACCAGTGCCCGGGGTTTGCCTTGCATAAATGGAGGTGCTGGAATTGGAGGTCAGAGTAGAGGAGATAGAGGCTTTAGACTCATGGGGCAAGGCTGCCAAGGGCAGATGGCATGTACACTGGAGGAACGCTGTCCGAGACCACTAACGGAGGCAGCCAGGAGGAGTGGCTCCATTCTTTCAAGAAGACCTCCAGTGACTAGGGCAGCTTGGTGCCCCTGGATCACACGGAATACCCATGAAGGAATCCTATCAGAGATACCTGTTATCTATATAATCCAACCATGTCAGTAAGCTTTTCCTACAGTGACACTACATAGCCGGCCACCCCTATCTACAGTGACCTGTGACAACAGTCGTTTCTCCTTGATCATGTCAGTTTCTGTAAGGTGGGCTGGTTTCATGCTTCAAGGCGTGAACTGCACTGTTTGTGAGCCTGTGGTTGACTTCAGATCTACTCCCGTGCGTTTAATCTGGTCCCCATGCTGAAGGGGCAGCAGCTCTCTGGGGAAAGTTTTCCTCATGGCTTTGAATAAAATACAGGAGAATAAACCACTGTATGTCATGCCTGCTAACATCCTAGTGGCTCAGGTGAGTCACATGACCAGGCCTAGCATCCTTGAGGCCGAGGAAGACACTATCTGAGGCAGTATATTCGAGAGGATGAATGTTTTTGAACCATCATCTCATCTGCCACAGGGACCAAGAAATAGGCACACCTCATCTTTACTGTCATTTTCCTTATCCCAAGGACCAGAACAGAACACTCAGCAAAGGGGGTGTCTGTCTGCAGGTCAAGTCCATACTCTTGTCCACCACAAACTGCGGTGACTCCTTTGATGAGGGAAAGAAGGCTGATCTAAGGACAGAAGAGAAGTTTTACAAAGAACAAAAGGCTAAGCCCTCGGAAACCAGAACGAGAGGC TCONS_00126777 TCONS_00126777 s 5' 0 TCONS_00126777 TCONS_00126777 s 5' 0 EMBV3_27545 CATCCTTATCTGCATCGTCATGCTGCTCACCATGGTCCTGCTCTTCGTCATGTGGATGAA Gene GeneID:525796|CDH4:XM_002692260:1571_cdna Constitutive 0 NULL GeneID:525796 13 GENE CDH4 NULL cadherin 4, type 1, R-cadherin (retinal) EMBV3_32077 CTGAAGCCTGTATTTGCAAGCATTAGGAAAATTTGTCTCTGTGTGGGCCAGAGCCTCAGC Gene BVT0101_019318 + 0 NULL GK000013.2:72810327-72816396 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21291 ATGAGAAGACCCAGAGTTCCCATCTTTCCTATTTAGGGACAGGCCTTGGATATTCTGAAG Variant GeneID:507217|LNP1:XM_002684709:38_cdna 317^380 3 EMBV3_33048 GeneID:507217 1 GENE LNP1 NULL leukemia NUP98 fusion partner 1 EMBV3_38857 GCGCAAGAAGAAGCCGGGGCTGGATGGGCGCACGTATAGCGAGCTGCTGAAGCGCATCTG Gene GeneID:505683|LOC505683:XM_002689137:113_cdna Constitutive 0 NULL GeneID:505683 7 GENE LOC505683 NULL similar to Tubulin polyglutamylase complex subunit 1 (PGs1) EMBV3_20199 TGCCCGCTGGATTGGGATGTGTGTTTTCATGGAGTGGTCACTTTCTATTACCTGCTAGCC Gene GeneID:509626|NSMAF:XM_002692667:23_cdna Constitutive 0 NULL GeneID:509626 14 GENE NSMAF NULL neutral sphingomyelinase (N-SMase) activation associated factor EMBV3_13130 CTCTGTCTGCTGTTCACACCTCAATGAAAACGGTCCACAAGAAGGAGGCCTTTAACTTCA Gene GeneID:786888|PNPLA1:NM_001099200:74_cdna Constitutive 2 NULL GeneID:786888 23 GENE PNPLA1 MGC151727 patatin-like phospholipase domain containing 1 EMBV3_41917 CATGGAAAGGCTCCTATTCTGATTGCTACTGATGTGGCCTCCAGAGGGCTAGATGTGGAA Gene GeneID:533700|DDX5:XM_002696101:171_cdna UTR3_Alt 2 NULL GeneID:533700 19 GENE DDX5 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 EMBV3_18373 ATCTGCAGCGCGCCGACTCTTGGAGCTGATGCTGTTGTACTTGCACATTGAGAACTGAAA Gene GeneID:513510|GTF2H1:NM_001046150:22_cdna Constitutive 2 NULL GeneID:513510 29 GENE GTF2H1 MGC128582 general transcription factor IIH, polypeptide 1, 62kDa EMBV3_18003 GGCCATTTCCCCTGGGTCACTCTGACCGCTTATGTTCCTTGTTGTTTATACTGTCCAACC Gene BVV0102_160419 - 1 EMBV3_13112 GK000010.2:97457684-98290771 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015479 TCONS_00015477 TCONS_00015478 1 XLOC_008491 NonCoding TCONS_00015478 XLOC_008491 NonCoding NonCoding - 10:98235616-98265948 - TSS10913 1158 2 TCONS_00015478_1 42 0.132987910189983 2 0.961887178134582 0 0 0 0 0 0 0 0 0 0 0 0 0 9.54877903095951e-05 2.31380185511173e-19 0 0 2.1667423444356e-05 0 0 0 0 0 0.000535626818319401 0 0 0 0 0 0 XM_003582749.2 FLRT2 PREDICTED: Bos taurus fibronectin leucine rich transmembrane protein 2 (FLRT2), transcript variant X1, mRNA. 2e-28 131 100.00 0.0613126079447323 XR_248023.1 LOC100506718 PREDICTED: Homo sapiens uncharacterized LOC100506718 (LOC100506718), transcript variant X2, misc_RNA. 3e-84 316 78.70 0.33160621761658 0 noncoding 0 0 1 1 0.0494712284353054 0.631711356795825 0.010588620311011 0.827604460558784 GATTTGGGGAAGGACGCGGCGCCGAGCGGAATTCCTACCGGGGCCGCCAGGAGACCTCCAAAACCTTCGCAGGTCATTGGAGCAGCTACTGAACAACTGGGGAAGAGTGTTCATGGGAAGAAAGGTATTGTCTCCTTCTGAAAGTTCTGCACAGCTGGCCAGCTTGTTGAGTCCCACTGACTCAGGTCTCCAAAGGGATATTTCTGAAATGCAAGCCAAAGGAAATTGGAATGTAACGTAAATAAGGTAAATATTTAATGTGATTCCTGGACTTGCCACGGAGGATGTGTGGCAGTTGGCATCAAGAGGACTGAGTTTGAGTGCAATCTCGACCATCTTTTGGCTGGGAGGCAGATTATTGGCTTTCTGGAAATCCAGTCTCCTCCTCTGTAAACTGACATTAATAATACCAAGTCACGCCTTGTTCTGAGAGTCAGATGAGGTGATACAAGGATCTGAGAGAGGGAGTAAATGGGTATATAATGTCAGCTACTTGAGGCTAGTTCCCAACTCCCGTCCTTTCTCCACCTTTTTTCTAAATCAAGATACAGGCTCTCTAATTTATTTCACAATTATCATAATGATTGTGATACTTATAGGCATCAATTATTTTCCTGTTCTTTAGGACATTCTTTGGGCAACAACAGGTCAATAACAGGAAAGAATGCCATCACATGATTGCGTCATGTTCTTCAAAATGAAATCTATTGAAGGTTGGACAGTATAAACAACAAGGAACATAAGCGGTCAGAGTGACCCAGGGGAAATGGCCCAATGAAATTAAACAAAGGAAATGTTATACTGTGAGGAAAAATCAATGGATTGTAATAGAACCCGGCAAGAAGAGACAAAGCTCTTGAGTCCCAGAGACCCAGAGGTGATTGAGAAGGGGTGTGTGGACTAGAACTCCGGCTTCTTGTTTTGCTTTTTGAAGGCTGTTTCCACTGTGTTAAGTATAAAGATAAATAATAAAGACATGTTAATTTGTTTTCTTTTTCTTAAGTGAGTTTCGATAGCTTGATGCATCTATAGGACATCAGGTCCTTAAGAGAAACACCTGCCATTGTTTTTGAGAATTATGGTTTTCTGGACACTGTTGCCTTACTTAATGTATCTACCACAGAAGCTTCATGAAATATGGATTATCACAGTTACACC TCONS_00015482 s 5' 66111 TCONS_00015482 s 5' 96442 EMBV3_01014 AATTCTTCCCTTTTCCAGTCTTAATTACTGTACTCAGTAGATTAGATGGCATGGACTCGA Gene GeneID:282704|TBC1D1:NM_001166524:8_cdna Constitutive 2 NULL GeneID:282704 6 GENE TBC1D1 NULL TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 EMBV3_30366 CCGTCCGGATCCGGCCCATGAACCGAAGAGAAGCCAACCAAAGGTATTTGCATATGATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17659 CTCCTGGTCGCTGGGACTTACATGTGGGGTGGAATGTGTTCCTTGACAATCACATGGTCT Gene GeneID:528722|LOC528722:XM_002693612:126_cdna Constitutive 0 NULL GeneID:528722 15 GENE LOC528722 NULL similar to olfactory receptor 1165 EMBV3_18991 CAGATCTCGGCTCCGGTGTCGGAGCAGATGGGGGCTATCTTCACTTTGGTGTCTCTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18861 GCTGCCCTATTACTACTGCTGCTGTCTCGCTTTAGCCACCTCTCTTGTCTACTCTGTTTT Gene GeneID:515589|C13H20ORF27:NM_001046205:1090_cdna Constitutive 2 NULL GeneID:515589 13 GENE C13H20ORF27 MGC137204 chromosome 20 open reading frame 27 ortholog EMBV3_09294 GCACGTAGACCCCCCGTTCCACAAGAACAGGTGAGGTTGAAGGAGCCAACCAGCTGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37393 TTCAGTGATAGTGTCTGTTGGCTGGACTTTGTGTCTATAGAAGCTGAGGTCCATCAATCT Variant GeneID:511554|C24H18orf19:NM_001080259:83_cdna 317^559 3 EMBV3_14259 GeneID:511554 24 GENE C24H18orf19 C18orf19 MGC143384 chromosome 18 open reading frame 19 ortholog EMBV3_11897 GAATTCACCCTGTGTTCTTTTTTGCCTATTTGGTGGGGAAGAAAGCAGCTTCACGAAGGT Gene BVT0102_359365 + 0 NULL GK000014.2:66033897-66242246 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41188 CTTGTTCCAGGCACAGGATACAGATTCAGGGTTGCTGCCATCAATGGTTGTGGAATAGGC Gene GeneID:505341|HCFC2:XM_002687642:807_cdna UTR3_Alt 2 NULL GeneID:505341 5 GENE HCFC2 NULL host cell factor C2 EMBV3_10664 ACGATGCACAGGAATAGTGCCTCCTCAGCTCCTTGATTAGTCCCTGCTTGGCTGCATGAT Gene BVT0102_062553 + 0 NULL GK000015.2:77828051-77949746 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066095 1 XLOC_040813 NonCoding TCONS_00066095 XLOC_040813 NonCoding NonCoding - 15:77921676-77923028 - TSS49838 1352 1 0 1.00633891543538e-05 0 0 0 0 0 0 1.45826358927348e-05 2.13982110062697e-06 0 1.69318265126352e-06 0 2.35805591805049e-07 0.000119687060099639 1.81442575203358e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_002707870.2 LOC100297422 PREDICTED: Bos taurus olfactory receptor, family 5, subfamily D, member 13-like (LOC100297422), mRNA. 7e-17 93.3 67.73 0.205621301775148 0 noncoding ACTGATCACGTTACTCAGCAAGCACTAAACCCATGACTGAGTAGGCACTAATCAGAGAATTGAGCAGGCAATATTTCATAAGAAGGCACTAAACCCGCATCTGAGGAGACACTAACCACACAGCTCAGTAGGCAAGAATCATGGAGCTGAGCAGGCTGTTTTGATGTGGCTAAGCAGACACTAATCATGTGACTCTGCAGGCACTAATGATATTTCTGAGAAGGCAATGATCACGTGACTAAGCAGGCACTAATCCCCTGACTGAGTAGACACTTATCTCAGAGCTAGCAGGAACTACTGACTTGGCTAGGCAGGCACAAATCATGCAGCTGAGCAGGCACGAATCATGCAGCCAAGCAGGGACTAATCAAGGAGCTGAGCAGGCACTATTGCTGTGCATCAGCAAGCACTGACCAAGTGGCTGAGCAAGCAATGATCACGTGACTAGCAGGCACTGATCACTTGACAGGACAGGCACTGATCATGTGACTGAAAAAGGACTGAGCACATGACTAAGCAGGCACTGATAATGTGTCTGATAAGGCACTGATCACGTGACTGAGCATGCCCTGATCACTTGGCTGTTTATGCAATGATCACATGACTGAGCATGCCCTGATCACGTGACTTATCATGCTCTGATCACGTAATTCAGCAGACATGGACCACGTGAATGAGCAGGCACTGATCACATGACTGAGCAGGCACTGATCACGTAACTGATCACGCACTGATCGTATGACAGCAGTCACTGATCACGTGGCTGATCAGGCTCTGATAGCGTGACTGAGCAGGCACTGATCACGTGGCTCATCAGGCACTAATCACCTGACTGAGCAGGCACAGATCACATGGCTCCTCAGGCTCTGATCACGTGACTTAGCAGGCACTGATCGAGGGACTAAGCACGCAATGATCATGTGGCTGGTCATGCACTGATCACCTGACTGATCATGCCCTGATTGCGTCACTAGTAGGCACTAATCACATGATAGAGCAGGCACTGATCATGTGACTGAGCATGCCCTGATCACGTGCCTGAAAGGCACTGATCACGAGACTAAACAGGCACTAAACCTGTGACTAAGCATGCACTGATCACGTGGTGGACAGGCACTGATCATATGACTGAACAGGCACTGATCACGTGGCTGATCATGCACTGATCACGTGACTTATCTTGCACTGTATCATGTGACTGAGCATGCACTCATCACGTGGCTGATCAGGCACTGATCTCGTGACTGATCATGCACTGACCACATGACTGATCAGCCCCTGATCACATGATTAAGCATGCACTGATCACGTGGCTGAGAGGCACTGATCATGTGACTGAACAGGCACTGATC TCONS_00062417 . 5' 109192 TCONS_00062417 . 5' 109192 EMBV3_41600 TTAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGTAGACTGCTCAGTTCCACTAAGCA Variant GeneID:510352|SPATA7:NM_001098928:100_cdna 204^299 3 EMBV3_38214 GeneID:510352 10 GENE SPATA7 MGC152639 spermatogenesis associated 7 EMBV3_06357 GTCAGCTCCTGTCTTTTCACTTGAGGGTTCTCAACCTCCTCTTCATTGGAACTTTAAGAG Gene GeneID:617568|LOC617568:XM_002689927:28_cdna Constitutive 0 NULL GeneID:617568 8 GENE LOC617568 NULL similar to chromosome 9 open reading frame 84 EMBV3_12916 CTGCTGGATGAACCGAATCCAAATAGTCCAGCCAATAGTCAGGCAGCACAGCTTTATCAG Gene GeneID:512207|UBE2B:NM_001037459:11_cdna Constitutive 0 NULL GeneID:512207 7 GENE UBE2B MGC133582 ubiquitin-conjugating enzyme E2B (RAD6 homolog) EMBV3_14323 TGCAAGTGTGAGTGATGATCATACATGCAGCTGATGGTTGCAGAGAAGAATGGAACAATT Variant GeneID:100139879|NUP37:XM_002687637:793_cdna 581^671 3 EMBV3_41943 GeneID:100139879 5 GENE NUP37 NULL nucleoporin 37kDa EMBV3_20146 GAGCAGTGCTCTTTTTCCTTTGTTACATGTGATTTAGACAAAATGAATATGGTTTACCTG Gene BVT0102_259653 + 0 NULL GK000005.2:28914617-28946679 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191323 TCONS_00191325 TCONS_00191319 TCONS_00191318 TCONS_00191330 1 XLOC_116888 Coding TCONS_00191323 XLOC_116888 Coding Coding SLC11A2 5:28887966-28923912 j TSS143398 7324 1 TCONS_00191323_3 529 0.0603495357728017 16 0.796689386562804 2.82930802857957e-05 6.73838254521344e-14 1.57293146346063e-10 9.42833563136751e-05 7.71238412509258e-05 2.08478589060452e-05 2.82375899823206e-05 8.83975161431738e-10 7.67134700074762e-05 4.03075858040385e-06 8.45213339236915e-14 7.69520164097384e-06 4.81155019822517e-06 6.68286613141534e-06 0 0.000495543251270585 0.000487542634104207 0.000216577866297755 0.000107021210522812 0.000410505296867726 3.00945179605952e-05 0.000322932576842377 0.000209133304563158 0.000572922849836375 2.32484208125648e-13 5.81489487055159e-05 1.89400110188911e-07 7.26785654344463e-05 1.91591254848064e-05 0.000127811106865981 XM_005206306.1 SLC11A2 PREDICTED: Bos taurus solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 (SLC11A2), transcript 0.0 8677 100.00 0.656744948115784 NM_001174128.1 SLC11A2 Homo sapiens solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 (SLC11A2), transcript variant 5, 0.0 1552 89.79 0.157700709994539 TCONS_00191323_3 sp|P49282|NRAM2_MOUSE NRAM2_MOUSE Natural resistance-associated macrophage protein 2; 0.0 931 85.41 0.998109640831758 1 coding 0 0 0 0 -0.122611647094105 0.426547092814908 0.0459176538180629 0.493888732137615 GCCGCTGGAGCGGGGACCGATTGTCAAGTGGTTGCGGAGCCGAATCCTTTTCTAAGAACTCAGGCACTCAGGTATCCACCATGGTGTTGGGTCCTGAACAGAAGATACCAGATGAAGATGCTTCTGGAGACCATGGAGACTCTGCCAGTCTTGGTGCCATCAACCCTGCATACAGTAACTCCTCAATTCCGCAGTCCCCCGGGGCGGGCTCAGAGGACCCCTTCACCACCTACTTTGATGAGAAGATTGCCATTCCTGAGGAGGAGTACTCTTGTTTTAGCTTTCGTAAACTCTGGGCCTTCACGGGACCAGGATTTCTTATGAGCATTGCTTACCTGGATCCAGGAAACATTGAGTCTGATTTGCAGTCTGGAGCAGTGGCTGGATTTAAGTTGCTCTGGGTTCTTCTGTTGGCCACCATCGTGGGGCTCCTGCTCCAGCGCCTTGCAGCTCGACTGGGAGTGGTCACTGGGCTGCATCTGGCTGAAGTGTGTCACCGCCAGTATCCCAGGGTTCCACGAATCATCCTGTGGCTGATGGTGGAGCTGGCTATCATTGGCTCAGACATGCAGGAAGTTATTGGCTCAGCTATTGCCATCAATCTCCTGTCTGTAGGAAGGATTCCTCTATGGGGTGGAGTTCTCATCACCATTGCAGATACATTTGTATTTCTCTTTTTGGACAAATATGGCTTGAGGAAGCTGGAAGCATTTTTTGGTTTTCTCATCACTATTATGGCCCTCACATTTGGCTATGAGTATGTTACAGTGAAACCCAGCCAGACCCAGGTCCTCAAAGGCATGTTCCTGCCATCCTGTTCAGGCTGTCGTACCCCACAGATTGAGCAGGCTGTGGGCATCGTGGGTGCTGTTATCATGCCACACAACATGTACCTGCATTCTGCCTTAGTTAAGTCCAGACAGGTAGACCGAGCCAATAAGCAGGAAGTTCGAGAAGCGAATAAGTACTTCTTCATTGAATCCTGCATTGCTCTCTTTGTTTCCTTTATCATCAACGTCTTTGTTGTCTCGGTGTTTGCTGAAGCATTTTTTGGGAAAACCAACGAGCAGGTGGTTGCGGTCTGTACAAACAGCAGCAGTCCCCACACTCACCTTTTCCCAGACGATAACTCAACACTGGCTGTGGACATCTACAAAGGGGGATTCCTGAACCTAAAGTGGTCACGCTTTGCCCGAGTGATTCTTACCCGTTCTATTGCCATCATCCCCACTCTGCTTGTGGCCGTCTTCCAAGACGTGGAGCATCTAACAGGAATGAATGACTTCCTGAATGTTCTTCAGAGCTTACAGCTTCCCTTTGCTCTCATACCCATCCTCACTTTTACGAGCTTGCGGCCTGTGATGAGCGAATTTGCCAATGGATTAGGCTGGAGGATTGCAGGCGGTATCTTGGTCCTTATCATCTGTTCCATCAACATGTACTTTGTCGTGGTTTATGTGCAGGATCTAGGGCACGTGGTATTGTACGTGGTGGCTGCAGTGGTCAGCGTAGCTTATCTGAGTTTTGTCTTTTACTTGGGTTGGCAATGTTTGATTGCACTGGGCATGTCCTTCCTGGACTGTGGGCACACGTACCATCTGGGATTGACAGTTCAACCTGAACTCTACCTTCTGAACACCGTGGACGCTGACTCACTTGTGTCTAGATGACGGGCAGCCTCAGGGACTATAGAAGACCCACTTTCTCGTAGTCCTTTTGTGCCAAGTGTCCTGTTAACATTTCTCTGTTAGTTCAGTCGTGAGTTTTGTTCAAACATTTTGAACAAAAGTTAAAAATTTCCTCATGGGAAGGGTGTTAAAGCTGACAGCTGTTAAGTGTAGGTCAGAGACCCACCACCTCACAACAGTCCTACAACTGCCAGAGTTAAATGATTAGCCTGTGGTGGCCACACACCCCTATGGGCTTGTGCCTGGACTTCTGGGATTAAATATATGTGTGTGTGTGTTTATGTAAACCTGAACTTACTGGTTTGGGTAGAGTTTTATATAAAAATGATATTTTGTATTTTTTAAACAAATTTGTTCAGATAAACCATATTTATTTTGTCTAAATCACATGTAACAAAGGAAAAAGAGCACTGCTCTTTTTCAGAATGAACTGGTCAAATAGACCGATTTTTAAAGTGATACTTGACTGTGGCCAGTTAAACTTGACTTGGATTTAATCAACCAACCCTTGGTAACTGCTGGTACTAGCACATCATTTCCAAAAGAAGACGTTTCTTTTCTTTGGCAGTCTTGTTTCATCCTGGTTGTCGGTGTGCTCTGTGGTTATTATTTTTCTCTGTTGTTGTTTTTCTTGAGTTTTTTTTCAGAGATATGATGGTATTTTCCAAAGAGCTTACTACCTAGTAACAATATCCAGAAATCATACTTTAACCAATAATCAGTTTTCCATGCTACATTGGAACTCAGCCCATTCTAGCATTTTAGGTATAAAAAAGAATTCTAACACTGAACTTTACAAAGCCCAACAGAAGATAATGGAGGCATTAATTTTCTTTCTAATGTGTGTATAGTCCCACCGTGTCTTGTCTTCCCCCTTTTCCCATTAATACTCCAGACACCATTTCTAGGCCAAAGTCTATATCCTGGAGTGGCTGATGTTTCTAATGCTGACTCTCCTAGGGAATGCTAAGCATTTTAAGTTTATTTATACCAAGTAGTATGAGATTAGACCCACACTGGGACTTGGAAGATTGGTCCACATGTTATAAACTGCCTGCCCACGTATGGGTTATAGATATTTTGATTCTTCTTCCTAACCAGAATTTTTTTCCATAACATTTTTATAATAAAACATTAAATACTTAAAACTTTCTGCAGAAAGTTTCTGCATATTGATCTGATTGAAAAGTCAGAACATTTTGAACACCAGGCTCACACCCCTTCATGATAGTGCATTTGACTTACACTGAATGGTAGCTATCCATTTTTAATGGAATGCAGTCTGTGCCTTCTCATTTCCTTCCAGCCCCAAAGGCTTTGAGTTTGCAAACCTTGCAGCCTTTGTATGTTTGAGCATCATTTTCCTCTTTGAGCATAAACCTCGCTGCCTTACTCTAAAACTTGGCACATTTCAGTAAGACTTAAAAGAAATCCAGACATCGCCTTTGTCATTTATAATGATTTGATCCTGTAAGTGGCACGGATTTGTCATTTATAATGATTTGATCCTGTAAGTGGCACAGATTTTTTTCTAAGATGATTCTTTAAATTCCCTCATTTCTAATTTGTGACCCTTGAAACTTCTGATAAGAGCAATAGCCTTGCAATTCAGGTTAGAGACCTTCTGATCTTAAAAGTAAAACAACATCATTTATGAGCTTTTATTTGAAAAAGAGACTTTAAAAATGGGTTTCAGTGTTTTGGTTTGTTTATATAGAGATAGCAACTCTATATGAATCAGTTTGTTGAATTTTTTTCTCCCTCCCTGGGCAGTTCCATTTCTCAGTAGTTTGATTACCAGAGGATGTTTGGGAAAAGAAAAAAAAAAAAAGGAAGAATCCTGTTTTATAACTCATAAAAAGATAAGGTGGTTGGTTAAATAGAGATTAAGTACTTGAGGGGTTTCTGTAGCTTTTCTCCATTCTTAAATTGTATCTTGCTAGGAACAGAGTAGAGTTTACAGCAAAAATTTATAAGTATACCTCTCAGTTCATACAACTCCTGTAATCAGAAAACTTTATAATAAAGCAAGCTGAATCATGCTAAAACCAGTGGAGGAGACTGATGTCTAACAGTAAGTCTTGGACAGACTTTTTTGCTAAGTTAATATTTAATCATTCCTTATGATTTACAGTCTGGATTTCGTGATACATGCTTATATAGAAAATAATATAATCAGTCTCCCCCCTTTTTTGACCCCACTGTGTGGAATGTGGGATTCTCCATCAGGGATTGAACTCATGCCCCCCCACCCCTGCAGTGGAAGTGCAGAGTCTTACCTACTGGACCACAAGGGGAGGTCCCAGTATAGTCAATCTTAAGATTAACCTAGATTCATATGCTCACTCAGTTTCTGAGGTTTAACACTATGGAGTCAATTTGTAAAAGGGTACTCTGATAGTCTATATCCAGGATATCAGAAAAACGCAATTAAATAGTTGTTACTGAACAGCTGCTGCTATATAACTGTGTGATGGCCTAATAAAAAAGTAGTCAGAGCATACCCAATAGTCAGGGAGGCATCAGAGATTATAGCAGCTGATAAAAATAGCCTTCTCAATTTTAAACATTATGATACTAAGCACCGAGCCTTTGCCCCAGAAGTATTGTGCAAATTCAGGTTTGTATCTGTTTATAGGGTCTTCCCTCCATGACCTCCCCTGTTTGTCCAAGTTAATGGGGGCAAATGGGCTTCCTGCGTACTTTTCTCCATCAATGATTTTACATTTTAATTTAAGCATAATTTTTGAGCTCTTATGTATAGCTACTTTTAATACATTGCTTTTTTTCAAGCAGTAAGTACATTAGTACTTTCAGAGTAAGATTATCACAAAATTCTGGAATCTTTTTAGTTTTGAGAAGACCCCGTTTCTGAGTTAATACTTCAGTTCATCTATTTTTAATGCTGAGCATGTTTTGGGAGAGGGGGATCTTTCTGGTAGCCTGATTAGAAGTATCTTCATTGTGTAATCAACATGAAGGATGACATTTCTATGCCAGAGGTCTTAAAATTTCCTGATTTCATGGAAGATATTATAGCCAACTGCTGGAATGTTTACTGTAGTGAAGTAGAGTAGTTGGATTCTTTCCTTGCCTGTTTCTAAAGTGTTGACTGGAACATGTCTGTCTGTTGGTGGCACTTGAAGAGCCTCATAGTAGGTGCAGATGGCAACTTTAAAAATAATTACCCTGAGCCAGTAGAGAACAGTGCATATAATACACAGAACAATGAGTTAATGTCTAGAATGCAGATATATTTTCAATATTGTTGCATCTTTCCCTTCTCCAAATACTAGACGACCTTCCAGTCAGAGTATTTCTCCACTACAGAAAACATAAAGAAGAGGAAATCATTACCACAGATCATATTACATGCATTTTAATGCACTTTTTGTTTTTCACCTTGCATTCTTGATTTTATCTCAGTGGGTACTTTTTTTTCCTCTGGTTTTCTTTCCCAGAAGTGCCTGGCAGGCTATACAGGCCATGGGGTTGCAATGAATCAAACACAACTGAGTGACTAAGCACATTTCTTTCCCAGGCCTGGAGTCAGAATAAATCTGAGGCATAGCAGTTATGACTTCAACAAGGTGGAACTAATTTTTAGAACCCTAGGCTTACAGAGGAGCTTGAGGCCTCAGGTATACTTCACATTTATTATCTTCTTTGTTTCTTGTGTTTTCTGCAGTGTCATGCCAGATTAGCAGTAGCACAAATGGACTAAATCTTTCCACTCCCACAATACTGCCATTTGACGGAAAAGGGATTTTTTTTTGGAATTTACCTTTGTATTCCCAGAAATACTTTCGAGAAGTATAAAAATGAATACACAAATATTTCAATATTAGACATTTATGTTTGTGGTAAATTAGTCAGGTTTCTGTATAAGAGTGAGGTGCACAGTGGTGAACCAATTATTTTTAAAAATTTCACTGAGCCCCAGGCAGCGCGCTAACCTGTGCTAACCTGCATGTGTTCCTGTGCTTGTCTGGTACACTCCCACACGCAGCCTCCCAGCTGAACCAAATTTAAATAACGACGTGGCCATTCATTCGCCTCTGATGTGATTTTTGCCCATTCTAAAAAGGAGTTTATGAAAGCCTTAATTACCTTGCCCTGTTTGGAGAGAATTAAGTGATGAATAGAGTGTCATGTCTAATATGGATAGTGAAAGTTTTTCTGTAGCCATTATATAACTCCTAATTTTCAGATTGATTTGGCATAATATAGATTGTTTTCTGGTGCTAACTAGAAAATAAAAATTGTAAAAGTCAGAAAATCATGTCCTAGGTTCTGCTGCTAAGTCACTTCAGTTGTGTCCGACTCTGTGCGACGCTATGGACGGCAGCCCATCAGGCTCCACCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGCGGGTTGCCATTTCCTTCTCCAGTGCATGAAAATGAAAAGTGAAAGTGAAGTCTCTCAGTCGTATCCAACTCTTAGCAACCCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTAATGGAGTGGGATGCCATTGCCTTCTCCTAGGTTCTAAAGGACATCAACAAAGGTATTTTTGAGTTGACTATTTATGGTAATTGATTTGGAAATCAACATCTTAAAAATTTGAAGGCTGTGAGAATTCTGACTGAAATTTCTGTGGTATAATATGCTACATATTGAAAATTCATTTTTCGTAAGTACTTTTCAGAAGACTTCTTATTTTTCTTGTATGTGGCTTCATTTTTTTGTAACCCTTATAGAGTAGAGAATATCTATAAGCAAAAAGTTGTATATCAATAGAGTATTGATAGGAAACAAACACTGAATTTCATCACTTGTATTTTTCTAAACAATTGAAAGCAAACACCCTCTATCTTATTATTTTTTGGCTTGGATCATACAGCTCACTCCAGAACTGGGGAAAAAAAAAAAATTAAGAGCCCTTTAGGATAAGTATAAATCTGAGTTTATGATGTTACTATGCCACCCTAAAGTTTTGAATTTTAAAATATTAAAAGGGAAAGTGGGACAATTTGGCAAGATCTTGAGATTAAAAACAATAAGCACTTTTACTTAGCAAACATCTATTCATTATTGTTCTCAGTATTGTACTTAGTATTCTGATAAAAAGGAAAGTAAATGGATTATAATCCCCACTTCTAGGAATTTACCATTCAGTGGATGAATTAGCTGTGTTTAGACAGATGAGACAGGTGTACATCTTCCCCAAGGATGAGATCCTAGGGCCCTGCAGAAATGGGGGAGGGCCTGGAAAGATAGCTTGAGAAAGAGCTGATTCAGTGAATTCAGGGAAGTCAGCAAATGTTCATACCCAAAGCAAGATAGGGAGCAGCAGATTTAAACTACATTCCATAACAGTTGTCAAGGCATCGGCTATCTTAGGTTGTCTAAACTAAACCTTTGCTTCATTTTCCTTCTGCTTTATTTATGACACTTCTTGTTAATAACTACAGAGTACACAATCTATAGTGTTAGTAAGTTCATTGTTCTCATCCTAATCAGCAAAATGAGGCAGATGACTGCATCATTTTCTAATGCAATAGTACTGTAACTATCAAAAATGCATAAAATTCAAGCCAAAACATGTTTAAACTTG EMBV3_40389 ACCAGTAAGTGGGCTCTCACCAGACAGTGAATCTGCTTGAGACTTGATCTTGAGCTTCCC Gene BVT0102_005994 + 0 NULL GK000005.2:18047086-18317747 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190989 TCONS_00190988 TCONS_00190990 TCONS_00190991 1 XLOC_116782 NonCoding TCONS_00190989 XLOC_116782 NonCoding NonCoding - 5:18167857-18175561 - TSS143205 3120 12 TCONS_00190989_8 47 0.424679487179487 3 0.595352460080488 0.00164061003195903 0.00165115376848851 0.00312899000061521 0.000696742397045433 0.000849257717795233 0.00104319576359014 0.00156791541610993 0.000959154191616391 0.00216841725271772 1.04457899684577e-11 1.41960845481364e-12 1.09138517627876e-10 0.000432938524864472 7.76776996174138e-12 0.000604614252639081 1.4315603296993e-07 0 0 0.0062686145325353 0.00333257319155552 0.00156619953557288 0 0 1.41461225636477e-08 0.000823824106856302 0.00296018485187828 0.00329853128044187 5.00928642623789e-08 3.34715747966638e-10 5.28553208241163e-10 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 6e-111 407 95.65 0.0807692307692308 NR_038864.1 LOC401324 Homo sapiens uncharacterized LOC401324 (LOC401324), non-coding RNA. 2e-46 192 75.00 0.100961538461538 0 noncoding 1 1 1 0 -0.203493665838488 0.156299921454155 -0.202435664755445 0.00530532271797981 GCACAGACCTTGTTAAGGAATGCTCTGGTGGGTGTTTTTCAAAATGGAGTCTTTTCCCTTTCTTCTGCCAGAAGCACAAGGGGGGTCCATGCTAAGCCTCCAGCAGTTCATCAGCTACAGTTCCAATTTCCCTGTCTGATTCCTGCAGAGCTTCTGCTCCTGTTTTCCCAGCACCATTTCTGAAAGAGACTGCTGCTGCTAAGTCACTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGATCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCCGACCCTCAGCGACACCATGGACTGCAGCTTTCCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGAAAGAGACTACTATAATATTATAAATCTATTATATTGCCTTTGCTCCTTTGTCAAGGACCAGTTGACTGTACTTACATGGGTGTGTTTCTGATTTTTCTATTCCCTTGGCCTATTTTTTTTTGCCAATACCACACTTTTTTTTTTATTACTGTAACTTCTTGAAATGCAAGTATAATGGATACTGGAGTTTTGACATCTCTCTGGGATTATGAATTAAGTTTTAAGATGCAAGCCATATTGATAGAGCAAAAAGAAGATCTTATGAAAGATGCTTAAATATACATTCTCTCAGTACTTCCTAAACTTCATTCATTGCCTACTAGCAAAATTTTTGCACCAGAACTATCATGGTGCTATTTTTCTATTTTAAAAAAACAAATAGAGCAAAACAAAATTCAACAATGTGTATGGAAACTGGGTATATGAAAATCTTCACTAATGGCACACATCATGTTTATTCTTCACATCTGAAGTTATTCTAAATGTTTCATTTTTTAAGGTTTGAGTTATTCATAGGCATATCCAAATTCTATGCCTGCAATTTGTGCTATCTAAACTAGATTCCCATAGGTCCACCCACTTTAGCTCCAACTAACATAATAATAACTAGCATGTTTTACATGTAAAACTGGCACTATATATATATATACATACATATATATATATATACACACTATGAATAAAACAGTTGAAAATATTCTCACAAAGTTATCTCAAGTGTACATAAGGTAACTAAAAATTTCAATCTACCTAGGTCTGGGGGATTTCTAGGACATAGAACTTTTGATGCTAAAATTGGAATAGTTTCAGACAAACCAGGATTGTTGGTCACACTACAAGTCTATAATATATTTAGGGAAACATGGCATTATCTCATATAATATTCTATCAGCTACCTAGTTAGATATAATTATCCCTCTTCTAAAGATGAGAATCCAGGTACAATGTGTATGTGGTAATATGGCCACTATTAAATACTGATATCTAGGTCTGGCTGGCTTTAAAATAGCTGAGAATAAACCAATTCTCACTTAATATCTTACAGGAAAATCAATTTTGACAATGTGTGTTACTCAAACTCTAGCAAGAAACTGTGGGGCTGTCCAGTCCCACCTTAGATTCCTCTTAAAGGGTTTAGAACACCACAGAGAGCCTTGCGTGAGTTCAGGGACATAGTCTTCTGGCCCACCATAAGGATGCCACCCTGTCTTCCCCCTTGCCCTGTGTTCCTTGTCCGTGTTGTCACTGTCGGCCACCTCACTTCGGCCCCCTTCTACTCTAGCCCTATTCAAGTGGCCCTCTCTCAACTGCTGAGTGTTTTCATCTTGCAGATATTTTAGTAAGATATGATTTTATTGTAAAACCTTCCCTAGCTGGGTTCTTTGTAGGAAAATTTGGGAAGATCAGAGCTAGATGGTAAAATAAACAGAAATATTCATCTTGCTATGGACTAAATATTTGTGTTTCCCCAAATTCAAGTGTTGAAACATAAAACCCAATGTATTGCTTTTAGGAGATGGGGCCTTTGGGAGGCACTTTAGGTCATGAGGGTGGAGCCTTCATAAAAGAGATGAATGCCTTTATGAAAGAGACCCTCAGAGAAAGCCTTGCCCCTTATGCCATGTGAGGTTATAGTGAGAAGGCACCATCTATAAACCAGTAAGTGGGCTCTCACCAGACAGTGAATCTGCTTGAGACTTGATCTTGAGCTTCCCAACTTCTAGAACTGGGAGATGTAAATTTCTGTTGTTAATAAGCCACCTAGTCTATGGTATTTGTTACAGCAGCCCAAACAAACCAAGACAACTTAAATATTTTCAGAATATTTCTTCCTCTTCTCATTTTTCTTGAACGAGTATCCTTTCAACTTTCTTGCCTAAAATGAAGTCTGCCTTTCCTTCCAAGATCTTTTTTCATATGCACAGACATATGGCAGATCTGTTTCACTGGCTTTCCAGATTTTGCCAGATAATGTGCTTTAGATAACTTGAAATGCTGCTGGTCCAAATTGAGATGTACTGGAAATGTAAAATACACATAGGATTTTTAAGATTTAGTGTGAAAAAAAGTAAACTAAAATATTTCATATTGATTATGTGATGAAATTATAATCTTTTGTATACTTTAGATTAAATTAAAATATATCAAGTTTTCATTTGTTTTTATTTTTTTTTTAATGTGGCTACAAGATGTGTAAAATGAAATGCTCACATTTCTGTTGGATAATTAACTCTACAGTATCATGATGGCCTCACATAGCTGGGATTAAAGAATATGTTTATCAGGAGAAAGTGCATTCATTTCTGTTTTCTTTGTCCATTCACTCCTCTATCCTCTCAACCATCCATATATTCACTCATTTAACAGCTGGGTTTTGTAGATGTAACTGTGGGGAAATAGACTTGGTCATTCTCTTCATGAATCATATGGTTTAGTGAAGGAAAAATTAATTAGTTAAATATTTCACCAGTAAACACATAATTAGAACCTGTGTTAGGTTGGAAAGTTGTGTGGGCCATGAAAGCCATACAGAAAAGAATTAGGCTTAGAAGGGGAGTAGGGCATCTAAAACAGTCTGTACTTTCAAGGGATTGAGCATTTGGCCTCATAGCTAAAGGATGAGTTGGAGTGCAGTAGGCCAGAGTGTGGTAGGAAGAGAGAGAAGACCATCCCAAATG TCONS_00190976 TCONS_00190977 TCONS_00190978 TCONS_00190979 TCONS_00190980 TCONS_00190981 TCONS_00190985 TCONS_00190986 TCONS_00190987 s 3' 116799 TCONS_00190976 TCONS_00190977 TCONS_00190978 TCONS_00190979 TCONS_00190980 TCONS_00190981 TCONS_00190985 TCONS_00190986 TCONS_00190987 s 3' 116799 EMBV3_10073 CCTGGGGTCAGAGCAGGCGACATTTGTGTATCTGTCTTACCTTTTCTAGTCAGGTTTGGC Gene GeneID:785086|CREB3L2:NM_001102533:757_cdna Constitutive 0 NULL GeneID:785086 4 GENE CREB3L2 MGC179367 cAMP responsive element binding protein 3-like 2 EMBV3_28601 TTCAAGTGTACAGTGTTGTGGCGATAAGTGCATTCACGTGGCTGTGCATCCGTCATCACC Gene BVT0102_041819 + 0 NULL GK000008.2:7899877-7983847 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226854 TCONS_00226853 1 XLOC_138099 Coding TCONS_00226854 XLOC_138099 NonCoding Coding - 8:7926559-7930669 - TSS169494 1931 1 TCONS_00226854_1 135 0.732263076126359 3 0.530786079338038 0.00027479082868848 6.22328397619853e-05 9.86680259208045e-05 0.000356936351929669 0.000327208869089051 0.000225800743652336 0.000516577614913056 0.00021163223126653 0.00017596951735019 2.13075931578351e-07 0 0 1.48567553275913e-06 0 0 8.71686805508007e-135 0 0.000513251019720857 0.000393860771517836 1.86210108088106e-05 1.41488742209721e-05 0 0 3.90682244366863e-05 1.89824688687382e-17 0.000189409940646345 0.000173576248556999 5.52688789217632e-07 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 967 86.50 0.413257379596064 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 1e-21 109 75.00 0.0880372863801139 0 noncoding 0 0 1 1 0.0695861030047038 0.548239109195306 -0.00528336050234671 0.919287240263166 ATCCAGAGAACTCCCTGCTGTGCCGAAGTTCCTGCTTGGTGGGTTCAGCTTCATGCGTTTTCAGTCCAGGGCCTATTTGGGAAGAATTCAGAGCAACTGACAAACAGCAGTTCAGGCCTGGAGCTGGAAGGATCGGTCAGAGGAAGACGAGTTGAAAGTCCCACGTGACTTCAGTTTTGGGGTGAGGAAACTGAAGTCCAGAGGGCAAGCCCAGCGTCTGACCCTCACCAGCTAATGCTGTGAAATGAACACCAGTTCCCACCTGCCCCTGGGCGGCAGACAGCCTAGGGGTATGTTTCCAGGAACCGTGTAGAAACGAGCTCCCCCCATTTTTTGCTTTTATAAACTATTTTAAATTGTGAAATACATATGACATAGAGTTTGCAAATGAACTGTTTTCAAGTGTACAGTGTTGTGGCGATAAGTGCATTCACGTGGCTGTGCATCCGTCATCACCGTCCACCTCCAGAATCTGAGCATGCAAAACTGAAGCCCTGTACCCATGTAACTCCCCATCCTTTCCTCCCCTCTGCCCCCAGATCTTATAGGGTGGATACTGTTATTCCCCCAGTCCCAACTTCACAGAGAAGAAAACGGAGCTCCCCAGCCATTCTGACCAGTGGCAGGTGGTACTCTATTGTAGTTCTGATTTGCATTTCTCTAGTGATTATAGGCCATGAGCATCTCTTCATGTGCCTGTTGGCCATCTGTATGTCATCTTTGAAGAAATGTCTATTTAGATCTTATGCCCATTTTTTGATTGGGCTGTTTGTCTTTTGTTATCGAGTTGTATGAACTATTGGTATAATTAAGCCCTGTTGGCCACATCATTTGCAAATATTGATAGTTCCTCTGAATCCATAAATTATCTTTTTGTTTTGTTTATAATCTTACCTAGTAACCATTTGGGGAAAAACCAAAGGTAGTGGGCATTCCAAAAAAAAAAAAGGTTCTCAACTGCAATTAAAACTAAACTAAAAAGTAGAGGAATGGAGTTTCTAGGGCACTGAAACTATTCTGTATAATACAATAATGATGGGCATATGCCCAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGACAAGAATACACAGAAGAACTATACAAAAAGGATCTCCATGACCCAGATAACCACGATGGTATGATCACTCACCTACAGCCAGACATCCTGGAATATGAAGTCAAGTGGGCCTTAGGAAGCATCACTACGAACCAAGCTAGTGGCGTGATGGAACTCCAGTTGAGCTATTTCAAATCCCAAAAGATGCTGCTGTGAAAGTGCAGCACTCAATATGCCAACAAATCTGGAAAACTCAGCAGTGGGCACAGGACGGGAAAAGGTCAGTTTTCATTCTAATCCCAAAGAAAGGCAATGCCAAAGAATGTTCAAACTATCACACAACTGTACTTATCACACACGGTAGCAAAGTAATACTCAAAATTCTCCAAGCTAGGCTTTCAACAGTACATGAACCAAGAACTTCCATATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGGTCAAATTGCCAACATATAAAAAGCAAGAGAGTTACCGAAAAACATCTACATCTGCTTTCTTGATTATGCCAAAGCCTTTGACTGTGTAGATCACAACAAACTGTGGAAAATTCTTCAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACGGGATATGGAACAACAGACTGGTTCCAAATTGGGAAAGGAGTACATCAAGGCTGTATATTGTCATCCTGCTTATTTAACTTCTATGCAGAGTACATCATTCGAAATGCCAGGTTGAATGAAGCACAGACTGGAATCAAGATTGCTGGGAGAAATATCAATAATATCAGATATGCAGATGACACCAC TCONS_00226849 s 3' 750 TCONS_00226849 TCONS_00226849 s 5' 0 EMBV3_03462 TCCACTGTTTATTTTGAGACTGAATGTCAACCAGAGAATATAAACAATCGCGGTGCATCC Gene BVV0101_012620 + 0 NULL GK000019.2:10382558-10390869 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092154 TCONS_00092156 TCONS_00092159 TCONS_00092155 TCONS_00092161 TCONS_00092162 TCONS_00092160 1 XLOC_056835 Coding TCONS_00092160 XLOC_056835 Coding Coding PRR11 19:10354878-10385123 j TSS69441 3953 1 TCONS_00092160_2 376 0.198330381988363 10 0.869627033461182 2.28021215197401e-18 9.19326074533848e-13 1.31771795499394e-59 1.57587926275823e-74 4.02288888677617e-06 3.88435168400714e-13 9.02276967812306e-19 3.66265455929018e-99 9.04828033741081e-09 4.5448377076765e-08 1.5027227921026e-25 1.43079527951211e-19 8.21245040313243e-75 6.89734683299431e-58 0.00012736909975701 0.00190625412257571 1.85285537177076e-161 0.00271902723390806 7.23660495246544e-71 1.04051108816419e-36 4.4283142525791e-78 6.32273364660349e-09 3.62571843587465e-09 0.000385110691125896 4.50950508679598e-136 3.77437239084628e-81 5.86788666237733e-39 1.21112425503284e-10 3.75302235613931e-11 9.1236201591447e-10 XM_005219924.1 PRR11 PREDICTED: Bos taurus proline rich 11 (PRR11), transcript variant 0.0 2437 100.00 0.341512775107513 XR_243671.1 PRR11 PREDICTED: Homo sapiens proline rich 11 (PRR11), transcript variant 0.0 1272 84.27 0.292436124462434 TCONS_00092160_2 sp|Q96HE9|PRR11_HUMAN PRR11_HUMAN Proline-rich protein 11; 0.0 515 78.85 0.965425531914894 0 noncoding 0 0 0 0 -0.045774248929075 0.722754301418711 0.0288739767998112 0.559349653718851 AGTGCAGGGTTATCTTCCTACGTTACCTGGGCTCGCTTCTCCTGCAGCTAGGTCTGTTGCTGCTGGCGTTCGTAACGGTTTGCAGAGGTGGGAACTTTGGCTGGACTCAGAGAGGAGATGAATCGGAAAAGAGGAGGGTTAAGGATGGAAACCATGCCCAAATTCAAGCAGCGAAGAAGAAAGTTAAAAGCCAAAGCGAAAAGATTATTCAAAAGAAAAGAAGCCTCTCACCTCCAGTCTAAGCTAGTTACACCTCCTCCTCCGCCACCCTCACCAGAAAGAGCGGTTATTCCTTCAACAGATATACCCATTAGCAGAAGCTGGCTAAGACTCTCCTGGAACTTCAGATTTCCAAGTTTTACAAATGCAATAAAGCTTTTGGCAAATAGAGTATGGTCTATATACAGCTGGTGCCAGAGCTGCATGACCCAGAGTTTCGAAGTTTTAAAAAACACCATCTTTCCATCCCGTCTCTGCCACCGAGAACTTCGTAGTCTAAAACAACGGTTTTGCGTTTTGGAAAATGAAGTATGCAAGCTCCAGGAAGCACTGAAGGCCATCTCAGAAAATTCCTCCTGTACCAGCTGTGGTCAAGCGTGTCACACGGGTGGTGAGCATCCAGACGTGCCCGCCTGTGCTCTAGCCAGCCCTGCAGACTCCGCAGCTCTCCGTCCTCCCTCCCCAGCGCAGCCGGCCAGTCGCCCTCCACCCCCTCTTCCCCCTCCTCCCCCTCCGCCTCCTCTGCCTCCTCCCCCACCACCGACAGCGCCATTGCTGCTCAGAAAACCTGCTCTCACGAAAGCACTTCAGGCTGGACCATTAAAAAAAAATGGACCCATGCAGATAACAGTTAAAGATCTACTGACTGTGAAATTAAAGAAGACACAGAGTTTGGATGAAAGGAGGAAGCTTGTACCATCACCAAAGGCACAGAAGGCCCTGGTTACTATCTCTGACCTGCAGCGCGTTACCCTGAAACCAAAGTCCAAAGCGTTATCAACTCGAGTTACAAATGTCTTAATTACTCCTGGTAAAAGTCAGTTAGATCTACGGAAACTACTTAGAAAAGTCGATGTGGAGAGGAGCCCAGGTGGAACCCCACTTACTAATAAAGAAAATGTGGAAACAGGAACTGGGCTGACCCCGGTGATGACCCAGGCCTTGAAGAGAAAATTTCAGCTGGCTCACCCTAGAAGCCCACCTCAAACTCTGCCAGTTTCTACAAGCAGCTTTGATGAACAAAACTGATGCCACCTCTGCCTAACTCCCAGCAATGATCCATAAAATGTACAGATAAAATGACCCCAATCCTTTTGAAGTATAATATGTGTAAATAATTATATTAATATATAATTCATTTGAAGAATTAAAATATGTATGGAGCCCATGCATACTGTAATGAAAAGTGGGAAATAGAATACTTTCTAGTTTACACGATTACTCACAGGACAGATGGGAAAATGCAATCCCCAAAGTGATGTTTATACTGGAATTACTCAATTTAAGTTAGGAAGGTTATTCCAATTTAACTAGATAACTCTGATTTGTGCTCTATAGGTATAGTTATGAGATTAAAATAACCTGGTACCCATTCATCTTGGGTATTCTCAGGAAATTAAAAAGCAAAATATTTCATCCTATAAAGCTCATCCATTCATTAAGTGCTACTTAATCCAGAAAGACCCTCTAGATTTTATTTCTGTTCCCTATAAGCAATTAAGTAAGATCATCTCCCATCCAAACCTAACTATTCCAAAAGGATTTGAAGTGAAAGGTCCAATGTGACCTTAAAAATTAGAATTTCATTTCTAGTATCATAGGTAGGTAACAGTATCAGGCTTACTGAAGTCTGGGATATTCTTTAATTTGATATCTGCTATCCACATTTGTACAGCTAAATATAGACTTCATGAAGACCTCTACATGAATCTTGGGTTTTCTACAGTGCCCCACTAGGGACTCTCTGAGGTCCATAGCAGATTCACCGTGAGACCTGATTCTTTGTCCTCAAGCACCTGTCAATTCAATAACAGTAATTCTGCACAATCACGGGATTTTACTTTTTCCTGCCAATTCAGGGTTGCCAGACTTAGCAAATATGAATACATGCCTGCTAAGTCACTTCAGTCGTGTCCAACTTTTTGCGAACCAATGGACATAGCCCACCAGACTCCTATGTCCATAGGATGCTCCAGGCAAAAATACTAGAGTAAGTTGCCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGGATCCAACCTGCATCTCCTGTCTTCTGCATTGGCAGGCTGTTCTTTACTGCTCAAGCCACCTTGGAAGCCCATAAATACATGACACCCCCATCAAATTTGAATTTCAGATAAACAACAAATAACTGGAGTGGTTGCCATTTCCTTCTCCAGGGGATCTTCCTTTTTTTTTGTTTGTTTTGTTTTGTTTTGTTTTTTCAGGGGATCTTCCTGACCCAGGGATTGAACCCAGGTCTTCCGCCTTCCAGGCAGACGCTTTAACCTCTGAGCCACCAGGGAAGACTTAAATATATATAGGGCCCATTAATCAATGAGTAATTTTTTAAGTATAACTATGTCCTAAATATTGCCATGGGCTTCCCTTGTAGCTCAGTCAGTAAAGAATCTGTCTGTAATGCAGGAGACCCAGGTTCGATCCCTGGGTCAGGAAGATCCCCTGGAGAAGAAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGGCTGGCAGGCTACAGTCCATGGTGTTGCAAGAGTCAAACACGACTTAGCGACTAAACCACCACCACCAAATATTGCCTAGGAAATATATTTATACTTAAAAAAATACGTCATTGTTTTTCTGAATTTCAAATTTACCTGAACATCTTATGTTTTCTTTGGCAACCCTACCAGTCAGTCTCCTACAAGGTTGCCAATATCTGGGAGCCCCCAGTTTTGTCAGACATGTCTGCTTAGCAGTAGGTACTACTGTAGCTTCAGCCAGGATCCCTATCACTAATGTGATATCACTATCGCTAAATATCACGAAAGAAGAGGAACTCTCATTAGGGTGGGCGAGACTCTGAAGGCACAGCATTAGCTCTGATGCTCATAACTTCCAATGCAGTTCCAAAATAAGGATAGTGGCTCCTCACAGAGGAGAATCAAGGAGTGTCAGTTTTACACTGAACTTTCCAACCTGGCAGGAAGCAGTTACATAGATGATGTCCCTGAAATATTCCCTGATTAGGCTAAAAAGATATTTTAGTAATTTCCCCAAAATGCCTATATTCCCCCAGATAAATGTAACTTTGAGATGCCAAATAGAGGGTTGTAAAAAGTCACCAGGCTGGAAAGCAGATATGGAAACAGTATTTTGTTTTGATGAGACCCACATTTATACATTTATACCTACATTTACATTTACGGATAAAAATTAAGCAGATACTGAAGTTAAGAAATACATCTGTTTCTAATAAAAACTTTTTAAACCTGTTACTACATTTATATTAAGTCAAATAAAGGGAGTGATCACTGAGAAGAAAGCAGGTGAGTATTTATAACAATATTTTATGGGACATCTAATAATGTTTATAATATTAATAAACCAATGTGTACTGTATCAATTTAAATGATTTTATCATTCTTGTGAGATAAAGGTTCATTTTTTTGAAAAGCTATAGAAATCCTATGGTTAAATATTTGTAAAGCTGCTATTACTATCGTATCAGTATTAAAATGTGTTCTATATGTATATTTTACTAATTTTTATGACAGGTTTCATATTGTACCCATTTGAGAATCCAATAACTGCTATGGCTTCATTAAATTGTTGCTGATCATGTGTTTCCACTGTTTATTTTGAGACTGAATGTCAACCAGAGAATATAAACAATCACGGTGCATCCAGTTATGTTTTTGAATAAAGAACAAAACAAAACTTTG EMBV3_12972 GTGGAGAGATGATTTACCTTATTGGTCAGGTTTCCTCTAGCCAGAAAGCAAGGGATGGCC Gene GeneID:781584|LOC781584:XM_002690617:8_cdna Constitutive 0 NULL GeneID:781584 10 GENE LOC781584 NULL similar to T-cell receptor alpha chain V region HPB-MLT EMBV3_31793 CTGCCCTAGATTTAATGCGCAGCGACTTGGGGTCATCTCTCCTTTGCTTCTCGTAGGAGT Gene BVV0102_388772 + 1 EMBV3_08176 GK000017.2:30231399-30287330 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076927 TCONS_00076929 TCONS_00076926 TCONS_00076928 1 XLOC_046940 Coding TCONS_00076926 XLOC_046940 Coding Coding HSPA4L 17:30202887-30285669 j TSS57635 4110 1 TCONS_00076926_3 793 20 0.95059252727075 0.00514265646996025 0.00171633086438536 0.00375081672417463 0.00291527770815076 0.00187099290683709 0.000985810456375364 0.0021809116384601 0.00175152102886734 0.00141108744311725 0.000234985803093649 0.000107861598771081 3.85708717203297e-15 7.92263116653917e-05 0.000190178908452206 0.000948849143647981 8.2295441208412e-08 8.66011423259001e-05 0.000132393134886037 0.0018768720842364 0.00200583453244588 0.00184115140750699 0.000138178306142261 0.000142267400684541 4.56097631474514e-05 0.00151344252228866 0.0020543607462366 0.00135192566260104 7.85692230269161e-05 5.01335891867067e-05 0.000130692970169411 XM_002707745.3 HSPA4L PREDICTED: Bos taurus heat shock 70kDa protein 4-like (HSPA4L), 0.0 4881 99.96 0.660097323600973 XM_005262838.1 HSPA4L PREDICTED: Homo sapiens heat shock 70kDa protein 4-like (HSPA4L), 0.0 4700 89.08 0.874452554744526 TCONS_00076926_3 sp|O95757|HS74L_HUMAN HS74L_HUMAN Heat shock 70 kDa protein 4L; 0.0 1569 95.17 0.991172761664565 2 coding 0 0 0 0 -0.0663139715751957 0.717741394170841 -0.0205496357597532 0.708655325376244 GCGGCGAAGGCTGCGGCGCGGGCGGCTTTCCCTTCCTCCAAGGTTCCCCGACGCGCTGCCCTAGATTTAATGCGCAGCGACTTGGGGTCATCTCTCCTTTGCTTCTCGTAGGAGTCGTAGTTCCAGGAGCAACAGCCCAGAAAAGGACGCGGTCCCCGCACCGAGGGCTTCTGCACCATCACCCCTACCTTTAGGCGGCGGGATGTCTGTGGTCGGCATTGACCTCGGCTTTCTCAACTGCTACATTGCAGTAGCGAGGAGTGGCGGCATCGAAACCATCGCCAATGAGTACAGCGACAGGTGTACGCCAGCGTGTATATCTTTGGGATCAAGAACACGAGCCATTGGAAATGCAGCTAAGAGCCAGATAGTCACGAATGTAAGAAATACAATTCACGGTTTCAAAAAACTTCATGGGCGATCTTTTGACGATCCTATTGTGCAAACTGAAAGGATCAGGCTTCCCTATGAGCTGCAGAAGATGCCGAATGGAAGTGCAGGGGTTAAGGTGCGATACCTAGAAGAAGAAAGACCTTTTGCAATTGAGCAGGTTACTGGGATGCTGTTGGCTAAGCTTAAAGAGACTTCAGAAAATGCTTTGAAGAAACCAGTGGCTGACTGTGTGATTTCAATTCCTAGCTTTTTCACTGATGCTGAGAGAAGATCTGTGATGGCTGCAGCCCAGGTTGCAGGTTTAAATTGTTTAAGGTTAATGAATGAAACTACTGCAGTTGCTCTAGCATATGGAATTTATAAACAGGATCTTCCTCCATTAGATGAGAAACCAAGAAATGTAATATTTATTGATATGGGACATTCTGCCTATCAGGTCTCAGTTTGTGCTTTTAACAAAGGAAAACTTAAAGTCTTGGCTACTACGTTTGATCCATATTTGGGTGGCAGGAACTTTGATGAGGTTTTAGTAGACTACTTCTGTGAAGAGTTCAAGACAAAATATAAGATAAATGTGAAAGAAAACTCTCGGGCCTTGTTGCGTTTATATCAGGAATGTGAAAAACTAAAGAAGCTAATGAGTGCAAATGCATCAGATCTTCCACTGAACATTGAGTGTTTCATGAATGACCTTGATGTTTCTAGTAAAATGAACAGGGCTCAGTTTGAACAATTATGTGCTTCCCTCTTAGCCAGAGTTGAACCACCATTAAAAGCAGTAATGGAACAAGCAAACTTACAACGTGAAGACATAAGTAGTATAGAAATTGTAGGGGGAGCAACACGAATTCCTGCTGTGAAAGAGCAAATCACTAAATTCTTTCTTAAAGACATAAGTACCACATTAAATGCTGATGAAGCTGTTGCAAGAGGATGTGCATTACAGTGTGCAATTCTCTCACCAGCATTTAAAGTGCGTGAATTTTCCATAACAGACATTGTTCCTTATTCAATCACATTAAGATGGAAGACCTCTTTTGAAGATGGAACTGGGGAATGCGAAGTATTCTGTAAGAACCATCCTGCCCCATTCTCAAAAGTCATTACTTTCCACAAGAAAGAACCATTTGAACTAGAAGCATTTTATACTAATTTACGTGAAGTGCCTTATCCGGATCCAAGAATTGGGAACTTTACTATTCAGAATGTTTTCCCACAATCTGATGGTGATAGTTCCAAAGTTAAGGTTAAAGTTCGTATTAATATCCATGGAATCTTCAGTGTGGCTAGTGCATCTGTAATTGAGAAGCAAAATATAGAAGGAGATCAGAGTGATGTTCCTATGGAGACAGAAACTTCTTTTAAGAATGAAAGCAAAGATGATGTGGATAAAATGCAGGTTGACCAAGAAGAAGGAGGTCATCAAAAATGTCATGCTGAACACACTCCAGAGGAAGAAATTGACCATACAGGAACCAAAACAAAGTCTGGTCTCTCAGAGAAACAAGAGCGACTGAACCAGAACATTAAAAAAGGGAAAGTCAAGAGTATTGATCTGCCTATCCAGAGTAGCCTGTGTAGGCAGCTGGGCCAAGATCTCCTCAACAGCTACATTGAAAATGAGGGGAAGATGATAATGCAGGATAAGTTAGAGAAAGAAAGAAATGATGCGAAGAATGCTGTTGAAGAATATGTATATGATTTTAGAGACAAGCTTGGCACTATCTATGAAAAATTCATCACTCAAGAAGACTTGAATAAACTATCTGCAATATTGGAGGACACAGAAAATTGGCTTTATGAAGAAGGAGAGGACCAACCTAAACAAGTATATATGGATAAGCTTCAAGAATTAAAGAAATATGGCCAGCCTATTCAAGTAAGGTACATGGAACATGAAGAAAGACCAAAAGCTTTAAACGACTTGGGAAAAAAGATCCAACTTGTCATGAAAGTGATAGAAGCATACAGAAACAAGGATGAAAGATACGATCATTTGGATCCTGCTGAAATTGAAAAGGTTGAAAAACATATCAGTGAAGCCATGAGTTGGCTGAACAGTAAGATGAATGCACAGAACAAACTAAGTCTCACTCAAGATCCTGTGGTGAAAGTTTCAGAAATAGTTGCAAAGTCAAAGGAACTCGATAATTTCTGTACCCCCATCATTATAAGCNCAANCCGAAAGTAGAGGTTGCTGAAGACAAGGCAAAAGATAATAGTGAACACAACGGACCAATGGATGGACAGAGTGGGGCTGAAACTAAACCAGATTCAACAAAAGACAACTCACAGCATACTAAGTCTTCTGGAGAGATGGAAGTGGACTAAGTCTTAACTTTACCTTCACGTAATTCCAATAGTGCAAGTAACCACAGAGTCCATTCTTCTTTTACATCTGGTACACACAACAGATGTTTAGTTGCTCTTAACCACCTTCTGTCATTTGTTTTTTGGAGTAGTTTTGAAAAGTGTTTTATACTGAGTGCACTTACAGTCATTTCCATTGCTGCTTATGTGAAGCTTTAGCTGAATATAGATTAACAAGTCAGTTTAAGCTTTCCTAATCTATTTTAGGTCAAACATGCAAGACTGATAAGTAGTTGGCAACAATCTACCTTACTTAAAGCTTCTACTTGGATAAACCTCAGCTCCTTTATTCAGGAAAGGATACTATATTGCACTATTGTTGCAGAAGCATAGATTTAATTGCATCATTATTTTTAAAAACATTGAAACTGATGTGGTTTAAAGCCACCAAGGCACTGACCTTTTTGTAGTTATTGTACTATTATAATTTAAACATTACAAATAGGTTCCTTGACAAACTAGTCCGTATCAGTGGTGTGCCATGAGAACTCCAAAACTTTATTATCACATAAATGAACTAAAACACACACTGAAGGGGAAAATGCACAATTTTATGTTAAGGTGACACCAGCAGTTTGCTTCTTTTCATTAGTCATGTGGATTGATGTTTCTCAGAGTAATTCAGTGTCTTTTGCACTTGAAACGTCTGATCTACTTGTCCTGAAGACCAGCTGCTGCTAAAGTAATGCTCGCCTAAAAACGATGAAGCATTTTTGATGAAAATACCTTCATGTTAAGGGGGAAATGCTGTTGACTTACTCAGACGTGCAACTGTGATGTTGATAGCCTTTGTTTTTAGTTTTAAATAGTTTTTGTTTTCTTAGTTCATTTTGTTAATGTTAACACAGGGTAGGGAGAAATGGCACAATGTGTATTGCATTATATACATTTATCAGTGATTTACTGTTAACATAAACACTATAAGCCGTAATACTTGAAAAGAAACACTTATACCACATAAGTCTTAGGAAATAATGCTTGTAATAAACTGTTACATATCAACAGGCAAATATAGAATGTTACATAGTGTAATATGATATGATGTGATTAAATTATAGTTCTTGCTGTTACATAACCTGTTCAGACCTTGGCTCCAGTTTTGGTGCTTCATATATTTATATGGGACGAGGGACTATGAAACTAAGATACTTTAAGTAGTCCAAGCTTCATCACCAGACTTGTTCACTGTTCAGTTCTGTCCAAAAGCTTGAAAATTTTCAGTATGGGAGGCAGACTGTTCAACCTTGAAGTAAGTAAATGTCCATATTCCAAGTTACTCTTTCTATCCTTCTGGAGCTGGTCTCCCAAAAGCCGAACTGCCAACACTTCCGGCCAAGACTGCAGGAC EMBV3_26413 TCTTTACTTGTGGATGGGGTGGCAGAGGAGGATCCAGGAACAGAAATGGGGATGTTCTTG Gene BVV0101_038187 - 1 EMBV3_30957 GK000021.2:59795814-59822519 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119912 1 XLOC_072999 Coding TCONS_00119912 XLOC_072999 Coding Coding PPP4R4 21:59398008-59808715 = TSS89670 2466 1 TCONS_00119912_1 821 23 0.994051706086592 0.00268790303512217 0.00229631805473235 0.0024705699431614 0.00198717580742721 0.00175547322781462 0.000595125956735767 0.00105774871530199 0.00213923326334597 0.00237982761665849 0.000157314980473313 9.41431907255779e-05 0.000157824561132301 0.000274682149248014 0.000678908595174299 0.00109966879615646 0.000171364603537003 0.000170718710744698 0 0.00363072207864087 0.00292379490632353 0.00250492819629818 3.51203223385312e-05 7.07934130848526e-05 2.03949217042344e-05 0.00469922233229095 0.00266247458431994 0.00180487433654713 5.41552515253502e-05 1.2189330131829e-05 0.000124341371610181 XM_001790303.4 PPP4R4 PREDICTED: Bos taurus protein phosphatase 4, regulatory subunit 4 (PPP4R4), transcript variant X1, mRNA. 0.0 4433 100.00 0.996350364963504 NM_058237.1 PPP4R4 Homo sapiens protein phosphatase 4, regulatory subunit 4 (PPP4R4), 0.0 3732 93.91 0.989862124898621 TCONS_00119912_1 sp|Q6NUP7|PP4R4_HUMAN PP4R4_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 4; 0.0 1573 96.21 0.995127892813642 2 coding 0 0 0 0 -0.038160200072176 0.813176611418035 -0.0197258245773152 0.681834026984272 ATGCATCCGCCGTCGCCCGCCGCCGCCGCCGCCGTGATGGATTTCAGTCAGAACAGCCTGTTCGGCTACATGGAGGACCTGCAGGAGCTCACCATCATCGAGAGGCCGGTCCGCCGGAGCCTCAAGACACCAGAAGAAATAGAAAGATTGACAGTTGATGAAGACCTCAGTGATATTGAAAGGGCTGTTTATCTGCTCAGTGCTGGTCAGGATATCCAGGGAACAAGCGTGATTGCGAATCTTCCATTTCTGATGCGACAGAACCCTGCTGAGACACTTCGGAGAGTCTTGCCAAAAGTTAGAGAAGCCCTGCATGTTGCAGGGGTGGAAATGCAGTTAACGGCTGCAGTGTCGTTTTTGACCATCCTGCAGGACGAATCGGTGTCCGTTCATACCTATGCCCACTCCTTCCTCCAAGTCATCCTACTGCACCTGGAGCACAGGGACGCAGGTGTCAGCAACGCATGGCTGGAGACTCTTCTGTCTGTGATAGAAGTATTGCCCAAAGATACCCTAAGGCATGAGATTTTGAATCCACTCGTTTCCAAGGCACAACTTTCCCAAACAGTCCAGTCTCGTTTAGTTAGTTGTAAAATTTTAGGAAAATTGACCAACAAATTTGATGCCCTTGCCATTAAAAGAGAAATACTTCCCTTGGTAAAATCACTCTGTCAAGATGTAGAATATGAAGTTCGATCTTGCATGTGTCGGCAATTAGAAAATATAGCTCAGGGCATTGGGACAGAACTTACCAAAAGTGTGGTGCTCCCTGAATTAATAGAACTTTCTAGGGATGAAGGCAGCAGTGTGCGGCTGGCAGCCTTTGAAACTTTGGTTAATCTGCTCGACATATTTGATACAGATGACAGAAGTCAAACTATACTTCCCGTAGTGAAATCATTTTGTGAAAAATCTTTCAAAGCAGATGAATCAATTCTTATTTCTTTATCTTTCCATTTAGGAAAACTATGCCATGGATTATATGGAATTTTTACTCCAGATCAACACTTGAGATTTTTGGAGTTTTATAAGAAACTTTGTACATTGGGTTTGCAACAGGAAAATGGACACAATGAAAACCAGATACCACCCCAAATCTTAGAGCAGGAGAAGAAATATATTTCAGTACGGAAGAACTGTGCTTATAACTTTCCGGCCATGATTGTTTTTGTTGATCCCAAAAACTTCCACATGGAACTCTATTCTACATTCTTCTGTCTTTGTCATGACCCTGAAGTACCAGTCAGATATACTATTGCTATTTGCTTTTATGAAGTGTCTAAACTTCTGAATTCTGGAGTATATTTAATACATAAAGAACTAATAACATTGTTGCAAGATGAATCATTGGAGGTACTAGATGCTCTCATAGATCATCTTCCAGAGATTCTGGAACTGATGTCTACTGGTGGGGAGAGCAGTGTTCAAGAAAATAAGTTATCATCTCTGCCTGACTTGGTTCCAGCTCTCACAGCTGCTGAGCAGCGAGCTGCAGCGTCCTTAAAGTGGAGAACTCATGAGAAGCTGCTCCAGAAATACGCCTGTCTGCCACAAGTCATATCAAGTGATCAGATCTATTATCGTTTCTTACAAAGAATGTTCACAATCATGATGACAAATAATGTCTTACCTGTCCAAAAGGCGGCTTCACGAACGCTATGCATTTTTCTACGTTATAATCGTAAACAGGAACAGAGACATGAAGTGATTCAAAAATTAATTGAACAACTGGGCCAAGGAAAAAGTTATTGGAACAGACTCCGATTTTTGGATACCTGTGAATTTATTATAGAGATCTTTTCCAAATCATTTTTCTGTAAATATTTCTTTCTACCTGCTATTGAACTGACACATGATCCAGTAGCAAATGTAAGAATGAAACTTTGCTACTTGTTGCCCAAAGTGAAATCTACTCTGAAGATTCCTGCAGATAAGCATCTACTTCAGCAGTTGGAAATGTGTGTGAGAAAACTCCTCTGTCAAGAAAAAGATAAAGATGTTCTGGCTATTGTAAAAAGAACCGTGTTAGAGTTGGACAGAATGGAAATGTCCATGGATGCTTTTCAGAAAAAGTTTTATGAGAAAGATTTGTTGGATCAAGAGAAAGAAAGAGAAGAACTACTTCTTTTGGAAATGGAGCAATTAGAAAAAGAGAAGCAACAAAATGATGGAAGGCCCATGAGTGATAAAACCTTTGAAAAGAAACGTAGAGACTCTAAGACACCAACAAGTCTGCCCAAGAACATCCCCATTTCTGTTCCTGGATCCTCCTCTGCCACCCCATCCACAAGTAAAGAAATCAAGAAATCTAAATTGATTCGAAGCCAGTCTTTTAATAATCAAGCTTTTCATGCAAAATATGGCAACTTAGACAAATGTACTACTAGTAAAAGTTCTACAGCAGCATATACACCTTCTGTCTCAGGTTTATCAAAGACTTCTATGATTTCACTAACTGGTAAGTAG EMBV3_14927 ATTTTAATGAAAACACAGCAGCACCTAGAAGATGTGGAGAATGAGCTGGCAGTACAAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01378 GACCTTTAAACGAGTTTCATTCTTTAAAAGGTACACAGCAGAGACGCGGACACCACCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39468 TTCTATGATGTCTGAGTCCCCTGATCCATTGCTCTTTGCTTCACAGCCTCCGGGGTTCCT Gene GeneID:537812|DPAGT1:NM_001015664:178_cdna Constitutive 1 NULL GeneID:537812 15 GENE DPAGT1 NULL dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) EMBV3_43034 GCTCAATTTGGTGGTAAAATCTTGAAGAAGATTCCAGTAGAGAGTGCCCACCTTGGGGAG Variant GeneID:100126170|LOC100126170:NM_001109963:192_cdna 632^750 1 EMBV3_42286 GeneID:100126170 29 GENE LOC100126170 MGC157123 hypothetical protein LOC100126170 EMBV3_31983 CTTCCTGGGACGGAGGCTGGCACTGAGCCAGGTGCTGGACAGCCTGCGCACCGTTGTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06941 CTTGAAGGAAGTCGATTCAACCACCCACTCCTATGACCTTGTCAGCAAACTGAACCTGCC Gene GeneID:100336504|LOC100336504:XM_002700419:33_cdna Constitutive 0 NULL GeneID:100336504 X GENE LOC100336504 NULL melanoma antigen family B, 4-like EMBV3_42489 CTGCTCTAATTTAGATGTAACTGCTACAAATACGTCTTTGAAAGCGCCTCAAAGTACTCC Gene BVV0102_452491 + 1 EMBV3_43043 GK000030.2:111203562-111213904 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253522 1 XLOC_156462 NonCoding TCONS_00253522 XLOC_156462 NonCoding NonCoding - X:111203882-111206383 - TSS190743 2501 3 TCONS_00253522_4 50 0.084766093562575 1 0 7.61613637598601e-05 0.000349546445709598 3.70012595837011e-05 6.64066064387607e-06 9.87040426454927e-06 1.43024778048321e-06 3.96398181810495e-05 4.49338461675769e-05 7.88698869343923e-05 1.00353109408987e-05 3.66123350836154e-05 0 6.7687864181065e-05 0.000139182483954515 2.74637115093279e-05 0.000918756512662122 0.000172594574959668 0.00373203296223669 0.000212175010404975 0.000186902478685596 6.91869130477008e-05 0.000735835519388826 0.000319128286842135 0.00109931887028758 0.000193919874536035 0.000132401809947738 9.83943281729043e-05 0.000165143405425622 4.07623663846837e-05 0.000235585284672769 XM_005216047.1 NLRX1 PREDICTED: Bos taurus NLR family member X1 (NLRX1), transcript 1e-54 219 89.16 0.0659736105557777 0 noncoding 0 0 0 0 -0.0250074812358964 0.843899383305906 -0.0250074812358964 0.843899383305906 CCGCGCCGAGCCGCACAGGAGGCGGCGGGCCCCGCCGGCCCCGCGCGCAGCCGCTGGGTCCTAAAGCCCTTTTCTCGACGCTTCTGTGGAAAACCTTCACATCCCTTCAAAAATCTGCAGCCCCGCGGGACCCGGAATTGGGATCAGGATGCCTTTCCAGCCCGGGCTCTGTTTTCTGGACCTAAATAACGCCGAATCCCTCAAAGGATCAGCGTTTCCGGTCACTTAAAAAAAACAAGCAGAGCCCGCAGATGCTTTTCAAAGTGCAAGTATATCGTCACGCACCCGGAATGTACCTTTTCATCCGACCAAGTCTGAAGCATTGCTTCCAAGGTGAAAGAGCATCATGGTAATCACGAAGAGCTAACGCTTTCCTTCCCAGAAAATCTGCTTTCAAAAATATTGATATATTCCTCCATAACTGACTAATTCAGCCTGCCGAAGACCAAGCCCTAATAAGGAAATGATTTTTTAGGCCACACCATACCTCTCTCTGCTTGCTGCTTTGTGCCAGCCCCAAGACTAACACAATGCCCTTTAACTCATTGGATCGGTGACAGCCTTCTGGACATCAGGATGGGCTCAGCCACTCCTCCCTTTGTCACTCAGAACTTGAGCCTTCATTAAATCTCTACAATTCGAGTTCTAACCTGTTCCATAAGAGATTGGACTTGAATAATTGTGAGATTCCTTTCCCCACTGAAGTTAGGTGATATCATCCATCTTCAGGCATCTCTGGCATTTTTCTCTTTAGGAATATGATGGCAACACAAATAGAATGTGAAGATTCAAGAGGAATGAAGACAAAAAATGTAGAGAACATGAAGGACTGTTTTTCTTCATTCTTCTGTGGCATGGGAAAATCTATTTATAAGGGTTAAGGGGAGGTATTCAGCCCATAGCTGAGAAGTGCCAGGCCCATTCTCTAAAAGGATTACTAATATCTATTTATAGCACCCAGCAGGTCATCATGTTCTGGATCAAGATACACACACTGTCACAAGTACAGAAGAGGCAGCCACACTCCATAAACTATTCATTTGATATTTTATTTGACACCATCTTAACTTTTAAAGGAAAAATTAACTTGTAGCTTAAAATTATGTTAGAGCACACTCAATATTTAGCATTAGATTTTATTTTTAAGGCAAAGGATTATCACAGGTTTTATATTAAGTAGACTGTACATAAACAGGCAGGGGGTGATAAGCCAATAAATAACATTGCTTTAAACACTATAGAGTCCAGTTTATGGCATATTATTTTCTAACAGTACAAAACTAATACAGAAAATACATTTGAAAGATCACAGTGTTCAGAACATTGTATAACAGCAGTTTTAAAGACAGTAAGGTGCATCTCTAAGCTTCTGACTCAACCCTGCTTCCAGAGAATTCATTATACCATGCACTGGCTGTAAGCAAATCCCCCACACGAAGGGGAGGCGACATCAACTGACCTGTAGCACTTCCCCCGCCAGGAACAACCAAGAACAAAAGCTAAAATCCGATGAGCATTGATTGGCAAGTTGATCCTGTTCAGCCAGGCAGCAGCTAACTTGCCCCAGTGACCATGTCTTTGTGTATTAAGTGTTTGCCATTTTGTCCTTGAGAATGTATGCATTCGAGCTTGTGATTGCTAGTTTCTTTGTCAAATACCTAAATGGATTGTGACTAAAGATCAATTGAATGTCATGTATTGCATTATACTTTCTTGCTCTGACTGAAATACCCATTATTTTCTTGAAATATTAAGTACAGAATAACAGAGTTCTAGAAAGTGATTTTTTTGGCATAATAATATGTAATATACCAGAATACTTGATAACTTGGTTTTATTATAAAATACAGTACTACAACATTTTGTGATATAGCAAAATATCTGACACAATGTTCTGCTCTAATTTAGATGTAACTGCTACAAATACGTCTTTGAAAGCGCCTCAAAGTACCCCTAAAGGAATATAATAATTAGCAATGAGTTGTAGAACCTTTTTTGGCAAAAAGAAAAAAAAAGGCATTTTTTAATAAGTCTCTCATTTTGTGTGCAAGGCTTTCAAAATTTTAGTTATATACAACATATAACTGGTGTTGGATTTAATGCTATTGGAAATTAGGCTTTTAAAATCATAATAACTAATCTGTGTTATTTGGTGTATTTTAAAATAAATTTATGTTTTTAACTCTGCATGTGTGCTGAGGCAAATGCATTGTAAAAAGAGTACAATTTTATTAATACTACTAATTTATTGAGCAGTTCTTCAAAATTCAGTAATACCTTAAATCATGCATGCATGCGAAATCACTTCAGTCATGTCTGACTCTTTGCAACCCCATGGACTGTAGCCCACCAGGCTCCTCTTTCCATGGGATTCTCCAGGCAAAAATACTGGAGTGGGTTGCCATGCTCCCCTCTAGGGGATCTTCCCTACCCAGGGATTGAACCCAAGTCTCTTGAATTATAGTATGTATTCATTCCTAAATACAGTTAGGAATAAGCAG TCONS_00248004 . 5' 170 TCONS_00248004 . 5' 170 EMBV3_17993 GATCATTGCCAACTTGAATGTCCTGTTGCACACCCTGCTGATGGCTCGACTCTCCTTCTG Gene GeneID:614886|LOC614886:XM_002697874:414_cdna Constitutive 0 NULL GeneID:614886 25 GENE LOC614886 NULL similar to olfactory receptor, family 1, subfamily F, member 1 EMBV3_25155 AGACTAAAGGAGCTTTGCGGTGACCCTTGTCGGTGCGAAGGAAGAGGATGATGAGGTCAA Gene GeneID:100125310|B3GALNT2:NM_001103343:58_cdna Constitutive 2 NULL GeneID:100125310 28 GENE B3GALNT2 MGC166416 beta-1,3-N-acetylgalactosaminyltransferase 2 EMBV3_21454 AGCTTGCAGGCTATGGCTTTTGCCATGTGCCCAGCAGTCCAGGCACCCACCAGCTGGACT Gene GeneID:616609|B9D2:NM_001040593:757_cdna Constitutive 0 NULL GeneID:616609 18 GENE B9D2 NULL B9 protein domain 2 EMBV3_28002 GGGACCACTGACCAGAGGGGGCTGTCTCGTGTGTTGGAAAGGCTTATTGAAGAGTATCTA Gene BVV0102_062288 + 0 NULL GK000003.2:121170614-121173762 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18984 AATTCTGCTGGTTGAATTTCGAGGGTGGCTTCCTCTGGAGTTTTGTGGGACCTGTGACCT Gene GeneID:338066|CD97:NM_176661:13_cdna Constitutive 0 NULL GeneID:338066 7 GENE CD97 NULL CD97 molecule EMBV3_14061 GCTATCAGGAACATGTGAAACAGCTGACTGAGAAGATGGAGAGGGATAGGGCCCAGTTAC Gene GeneID:511531|LOC511531:XM_002686268:94_cdna UTR3_Alt 2 NULL GeneID:511531 3 GENE LOC511531 NULL similar to guanylate binding protein 1 EMBV3_28618 TAACGTTCTCTCCCCATCCTCAGCTCTACTCCGCACTGGAGTCCCCGCTGACCTTTATTA Gene BVT0102_021970 + 0 NULL GK000004.2:49023150-49037767 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22557 GCTAGTTGTGATTTTGATGGTCTCGCAGGAGGAGATGAGTGCATGACTTGGTCTGACAGG Gene BVT0102_103257 + 0 NULL GK000003.2:14507433-14531697 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172054 TCONS_00172055 1 XLOC_104016 Coding TCONS_00172054 XLOC_104016 Coding Coding C3H1orf182 3:14530040-14538372 j TSS128227 2374 1 TCONS_00172054_2 129 0.0429654591406908 4 0.715520345696795 0.00151294030103806 0.00113925666195119 0.00104235611689227 0.00157821625640626 0.000671887136355357 0.000198252196107233 0.000568865252397019 0.000508658583652522 0.001431992634958 1.73376790804377e-05 5.95908498738322e-05 2.40241759717608e-234 0.000161165279358612 1.36130298379705e-05 5.3950769065671e-05 2.90959430921072e-05 0 3.03342592424904e-122 0.00241080225900118 0.00341236918254892 0.00140244970126887 0 0 1.00586230372755e-190 0.00145593298204385 0.00142286596253321 0.000924907693980647 2.00815644502819e-05 1.48553042426397e-05 9.30462839741309e-06 NM_001076989.2 TSACC Bos taurus chromosome 3 open reading frame, human C1orf182 (TSACC), 0.0 834 99.78 0.195450716090986 NM_144627.3 TSACC Homo sapiens TSSK6 activating co-chaperone (TSACC), mRNA. 2e-147 527 87.41 0.177759056444819 TCONS_00172054_2 sp|Q3T016|TSACC_BOVIN TSACC_BOVIN TSSK6-activating co-chaperone protein; 2e-83 244 99.20 0.961240310077519 0 noncoding 0 0 0 0 0.085568621376803 0.459422495011287 0.0122055055681132 0.830731559743055 CTTCTCTCGGGCCGCGAAGGTCAAGAAAGGCGTGGCAGTTTCCACGCTTTCGTTCCAGCCTTAGCAACGGCGAGCGATAGAGGGGCGGGACTTAAACCGGCTGTTGAGAGAAGACCTGGCCGGTTTGATGCTGGGAAATGGGAGTTGTAGTCCAATCCGGCTGGGCTGAGCGGTGACTATCCTTCCTGGCACGCTGGGAATTGTGGTTTATTGTCTCTGACTCGTTGCTGTGCGTGGACTTTCCCTTTCTTAGGCACCACACCTATGGGTGTTCAGATGGAGCAGCTTCCTAGTCATCCTACTAACAGAAGAGCCAAAGAGGAGGGTAATGCTGTGCCTCTTTGTCGAGCCAAACCCTCCCCCAGCTTTATTAATCTTCAAGCAAGTTCCCCACCAGTCACTTTACTGAAAATCCTGCCAACAAAGTTGCCGTCAGGTATTAACCACAAGCCCAAGGAATGCCTAGGACTCCTAGAATGTATGTATGCCAATCTCCAGCTTCAGACCCAGCTCGCCCAACAACAGATGGCTATTTTGGAAAATTTACAAGCATCCATGACACAACTGGCTCCTGGGAAAGAAAACAAGAACTCTTCTCTCCCAGCCTTATCTCGCAATCTATTGTTAAGTCACCTGCCCCAATTCAGTAAATGAATTGTGGAACAAAGTTATTGTGTATGTTTTCCCTGCTGTCTTCTCAGTAAACCATTGATGGAATCTGGGCTTATATATTCTATATGTGGTTGGTTGGTTTACAAGATCGTATTAAGTGCTCACTGAGTGCAAAGCGCTGTACAAGGCACTTGGGAATGCATATTACAAGAGAGAGAAATTGTGGGGAGGGAGTTTACTATCTAGCAAAGCAGAAAAGACAGTTCATTGTAAAATTTAGCAGTACTCTAAGAGGGAATGGAAGTTCAGAGATAAAGGTTAGTAGGATACTGGATCAGTTGTGGAATCTTGCCAGAGGAAGTGGTGCCACTTGATGAAGGAGCTACATTGGATGGCCTGGGCAGATGAAGTAAGGTAGTTCCATGTCAGTTGGAAAGCTTGGGCAAAAACCGAGAGGTAGGGGAATAAGTCATCAAAAATTAGGAAAAGAGGATTATTTTACCCCCAGAATGTAGAATGTGATGTGAAGCAGAATTGGAGCAGCTGAGAACAGAGCAGCTTTCCCTGGAGAATTGTTCTGCTAACAACTGTTAGAAGCTCTGGTTTTATTTGAAGCACCGGAAAGCCATTGAAGGCTTTCAGGTAGCAAAGGATACAAAATGGGCAAAACATTTTGGGGTGGAAGGAGGATGCAAGTGGAGAGGCCCCTGTGAAACTACCAGGGTCTGGATAAAGGGTTTAGATATAAAGACAGGCAATGGGTAAATCTTAGCTATATTGTAGAAAGGGACTAGTCTCGAGCTTGAAGAACCAAGCGACAGCATCCTGAAATTTCTAAGTTGGGAAATCAGTTCAGCTTTCATGGGGGTTCAAATCCAGCCACATGTTTTCAGTGTTTGAGAAGCGGACACCAGAGGTTGGCTTAGTCATTTGGACCACATTAGATCACTGCTTTCTTATACATTTGTGTTGGCAAGTTATTCTTGAGACTGAGACTAGGTCCTTTTTCCAGAAGCTTATTTTCCTATGGAATGTGGAGAAGATAAAAGGAGAGTTAAGCCTGAATTCAGAGATGAGAAAGTGAGAAAGCAGTGGTTGAGAAGAGAATTTCACATTGGCTTCAACTCTTTGAATGGTTTTTCAGAGACTTCTTTTTTAAAAAAAACTTTTTATTAATATTTTGTATTGGGGTATAACCAATTAACAGTTGTGAAAGTCCTGCAGTCAAATCCTGCTGGCCTTCAAAGTAAAATTCTCTGGGGACTCCTAGTCCTTTACCGTTGTTGGGTTCCAGTGTCCTCCTCTCGGTGGTTGTTCAACAGCTAGTTGTGATTTTGATGGTCTCGCAGGAGGAGATGAGTGCATGACTTGGTCTGACAGGAGAAGGTGAGTGCCATCTTGAATCTGCTTCCAGAGAGAGTTCTTTATTGTGTATGAATAAGGAAGACTGAGCAGAGATGTATGTCATCAACCATCACAATACTGTAGTTATCCTCCAATTAAAAATAAAGTTGAAAAAAGGAAGACAGCAGGGATAAGGCTGAAGTGAAGCTTGAGGAATTGGGGTTGGGGATTGAAAATTTTTGATTAAGCTATTATTTGTGGAGAAAAGAGAAATAAAGTAATTTTAGAAAGAGGCTCTGACATTTGTGCATAAGTTTTGACCCAACTGCTTGGAAAGAGGAAGGATATGTTATGTCTGGAAGTATGTCTATTTCATCATCTCATCATCTTCATTAAAATGCAATTTTTGAGTAAGATC EMBV3_06502 CAATCCAACACGGCTGTCCTTGAGCACTTCAAATTACTTGTCGTAATATCTGCCTCTTAC Gene BVV0102_129565 + 0 NULL GK000006.2:52615261-53117070 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23683 TGTGTCCCAGAGCTGCCGGCAGTGGGGTCCTTTTACTTGAAGTTCTCCTTCAGTGTAAAT Gene GeneID:506553|CAMSAP1:XM_002691656:391_cdna Constitutive 2 NULL GeneID:506553 11 GENE CAMSAP1 NULL calmodulin regulated spectrin-associated protein 1 EMBV3_38421 CCCGCTGTTCCGCAGCCTCACTATCAAGAGGGAAGATCCGCCTGCACATTCTCAGCCAGA Variant GeneID:514926|CDC123:NM_001080274:2_cdna 329^400 1 EMBV3_11454 GeneID:514926 13 GENE CDC123 MGC133958 cell division cycle 123 homolog (S. cerevisiae) EMBV3_29426 TAACACTGCCATGTCCCCTAAAGTGTGTTCCAGCCTTATGCTTGGTTCCTACCTGATGGC Gene GeneID:788607|LOC788607:XM_002699185:18_cdna Constitutive 0 NULL GeneID:788607 29 GENE LOC788607 NULL similar to olfactory receptor Olr1242 EMBV3_22758 TCTGGACATCATCTGGATCAACACCCCTGAACGGACTGCGCCCTATGGACTGTCCAGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26092 TCGTCGCTGTACTGGTACAGCAATCAGCTGGTGGTTAAACAAATTGGGATTAGCTGAAAT Variant GeneID:516875|IPCEF1:XM_002690351:10_cdna 363^508 1 EMBV3_29954 GeneID:516875 9 GENE IPCEF1 NULL interaction protein for cytohesin exchange factors 1 EMBV3_16632 GATGAAGCATAAATCGGAAACAGATACAAAGGAATTGATCCATTTTCCTTAGATGCTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00006 CAGGCGGGCTACCTGTGCGTTCCACCGTCCTACCAAGATGGGATAGACTTTATTTACTGA Gene GeneID:538310|EP400:XM_002694453:53_cdna Constitutive 0 NULL GeneID:538310 17 GENE EP400 NULL E1A binding protein p400 EMBV3_29396 GCGCATCTCATTTGCCATTACCTGTGCTCTGTATATTTGATGTACACGTCCCCACACATG Gene GeneID:504217|TNRC6C:XM_002696160:104_cdna UTR3_Alt 2 NULL GeneID:504217 19 GENE TNRC6C NULL trinucleotide repeat containing 6C EMBV3_42934 TCTGGGGATCAGCATGCCAATTCTTCTGTGGACCCTGTGAGAATGGAGGTCAGTGCAACA Gene GeneID:100337483|LOC100337483:XM_002684966:247_cdna Constitutive 0 NULL GeneID:100337483 1 GENE LOC100337483 NULL multiple epidermal growth factor-like domains 6-like EMBV3_26697 TTCCTGGTTGCCCTATTTCATACCATCCTCACCTTCCGCCTCTCCTACTGCCATTCCAAC Gene GeneID:100299725|LOC100299725:XM_002693748:508_cdna Constitutive 0 NULL GeneID:100299725 15 GENE LOC100299725 NULL similar to olfactory receptor 154 EMBV3_20263 GGACTGAAGCATACCTCTTTAACTGGTGCTTAGTGTGGGGTCTCAGGGTCTCAGTCTTCT Gene GeneID:507234|TRAF5:NM_001105340:45_cdna Constitutive 2 NULL GeneID:507234 16 GENE TRAF5 NULL TNF receptor-associated factor 5 EMBV3_18962 TGCCAAGGCCCCACTTCAGACGAATGAAATCAGAATTTCTAAGAGAGGAGGTTGGCATGC Gene BVV0101_042130 + 0 NULL GK000019.2:48987359-49006441 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05936 AACAGTGATGACAGCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACGTGTTGCCCA Gene GeneID:282028|RAB34:NM_001033612:28_cdna Constitutive 1 NULL GeneID:282028 19 GENE RAB34 MGC127952 RAB34, member RAS oncogene family EMBV3_01720 GAAGATGCCTTCAATGTGGCAAGTTTCCTGGACAAAAGTGAAGCTCCAGGCACATCTAGC Gene GeneID:785714|STRA8:XM_002686968:58_cdna Constitutive 0 NULL GeneID:785714 4 GENE STRA8 NULL stimulated by retinoic acid gene 8 homolog (mouse) EMBV3_05964 ACAAGACACACGACCCAAGCGTCACCTCATCACTCCCGTGCCTGGTCAGTCAGAGTCCCA Gene GeneID:511930|PDZD7:NM_001075544:117_cdna Constitutive 1 NULL GeneID:511930 26 GENE PDZD7 MGC139520 PDZ domain containing 7 EMBV3_18195 GCTGCATCGCTGAGAGTAAGAATCTGGCCTGAATACCCTGAGCGCTATCTGAGCGAAATA Gene BVV0102_176178 + 0 NULL GK000027.2:16850316-17502163 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177648 TCONS_00165814 TCONS_00115686 TCONS_00252353 TCONS_00020158 TCONS_00224113 TCONS_00197928 TCONS_00231338 TCONS_00252235 TCONS_00250720 TCONS_00116100 TCONS_00010366 TCONS_00071860 TCONS_00220662 TCONS_00038381 TCONS_00222766 TCONS_00129573 TCONS_00209846 TCONS_00012329 TCONS_00230723 TCONS_00177370 TCONS_00230710 TCONS_00218945 TCONS_00252107 TCONS_00057309 TCONS_00250930 TCONS_00008224 TCONS_00056146 TCONS_00249011 TCONS_00123620 TCONS_00031939 TCONS_00107179 TCONS_00177940 TCONS_00089345 TCONS_00039951 TCONS_00070930 TCONS_00238306 TCONS_00039227 TCONS_00063181 TCONS_00018773 TCONS_00234065 TCONS_00009259 TCONS_00111497 TCONS_00209636 TCONS_00032589 TCONS_00222777 TCONS_00124585 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00064462 TCONS_00178325 TCONS_00233372 TCONS_00161667 TCONS_00012336 TCONS_00153218 TCONS_00010470 TCONS_00029865 TCONS_00240534 TCONS_00123168 TCONS_00065823 TCONS_00122281 TCONS_00209032 TCONS_00140840 TCONS_00040744 TCONS_00012332 TCONS_00110323 TCONS_00085967 TCONS_00039904 TCONS_00109025 TCONS_00199802 TCONS_00109451 TCONS_00209558 TCONS_00178426 TCONS_00020756 TCONS_00238327 TCONS_00040740 TCONS_00179741 TCONS_00177996 TCONS_00088088 TCONS_00157613 TCONS_00021595 TCONS_00117619 TCONS_00040502 TCONS_00135546 TCONS_00161835 TCONS_00059708 TCONS_00115148 TCONS_00177281 TCONS_00170823 TCONS_00116665 TCONS_00072814 TCONS_00142649 TCONS_00122313 TCONS_00249087 TCONS_00020023 TCONS_00223554 TCONS_00011864 TCONS_00251907 TCONS_00107832 TCONS_00199037 TCONS_00019199 TCONS_00122686 TCONS_00166449 TCONS_00157036 TCONS_00031910 TCONS_00022066 TCONS_00152645 TCONS_00251929 110 XLOC_131641 XLOC_107421 XLOC_100654 XLOC_069855 XLOC_155294 XLOC_010836 XLOC_137409 XLOC_119588 XLOC_140827 XLOC_155176 XLOC_153663 XLOC_070269 XLOC_005917 XLOC_043630 XLOC_133979 XLOC_022206 XLOC_136073 XLOC_078286 XLOC_128357 XLOC_007841 XLOC_140213 XLOC_107144 XLOC_140200 XLOC_132264 XLOC_155048 XLOC_035108 XLOC_153873 XLOC_003782 XLOC_033949 XLOC_151954 XLOC_075172 XLOC_018184 XLOC_063090 XLOC_107713 XLOC_054130 XLOC_023768 XLOC_042707 XLOC_144973 XLOC_023045 XLOC_037908 XLOC_009455 XLOC_143544 XLOC_004815 XLOC_067397 XLOC_128147 XLOC_018829 XLOC_136084 XLOC_076129 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_039186 XLOC_108098 XLOC_142854 XLOC_098554 XLOC_092983 XLOC_006021 XLOC_016120 XLOC_147198 XLOC_074722 XLOC_040542 XLOC_073836 XLOC_127543 XLOC_085269 XLOC_024558 XLOC_066227 XLOC_052005 XLOC_023721 XLOC_064930 XLOC_121454 XLOC_065355 XLOC_128069 XLOC_108199 XLOC_011431 XLOC_144994 XLOC_024554 XLOC_109511 XLOC_107769 XLOC_052875 XLOC_096068 XLOC_012268 XLOC_071785 XLOC_024318 XLOC_081769 XLOC_098720 XLOC_036490 XLOC_069449 XLOC_107055 XLOC_103665 XLOC_070831 XLOC_044582 XLOC_087074 XLOC_073868 XLOC_152030 XLOC_010701 XLOC_136854 XLOC_007414 XLOC_154848 XLOC_063742 XLOC_120690 XLOC_009879 XLOC_074241 XLOC_101287 XLOC_095496 XLOC_018155 XLOC_012737 XLOC_092410 XLOC_154870 Coding TCONS_00218178 XLOC_131641 NonCoding NonCoding - 7:99213677-99241810 - TSS162275 5729 2 TCONS_00218178_2 157 0.905568161982894 3 0.796459547845869 0.000886771403701653 0.00102376193620026 0.000637427881539969 0.00060712227498956 0.000861658363640783 0.000240511398755287 0.0006507876490391 0.000334216051602831 0.000730185142003349 0.000214057065001311 4.3941352307135e-05 8.08315428101829e-05 0.000233250163478171 0.000763452724724909 0.000798732785629046 7.35735537230835e-05 3.13399592248213e-05 3.72164237701071e-05 0.000220143769383598 0.000283865233785678 0.000112882883633591 4.31142807595197e-05 6.58079553498174e-05 3.90706298563263e-05 0.000459456809083102 0.000383679264587045 0.000370165826075435 3.40174828754841e-05 6.31436507816371e-05 7.1976296098839e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 3e-131 475 97.51 0.0488741490661546 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-83 315 68.10 0.168964915342992 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 -0.0148602594801673 0.803029043356466 CTGCTCTAATTTTTAAGATTTCTTTCCTTCTACTAACCCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTATAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTAAGGTATGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGCCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGGTTTTTTCCTGTAATTGAGATCTAATCTTACTGCATTGTGGTCAGAAAAGATGCTTGGAATGATTTCTATTTTTTTTTAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGATGAAATGTCCTATAGATAGCAATTAGGTCTAACTGGTCTATTGTATCGTTTAAAGTTTGTGTTTCCTTGTTAATTTTCTGTTTAATTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGTGGCACTCCCGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGATCATCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAACACATGCAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCGTTGCCATTTACTTTATTGTTTTGGGTTTGAATTTATACACCCTTTTTGTGTTTCCTGTCCAGAGAATATCCTTTAGTATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGAAAAGCTTTTGATTTCTCCTTCATACTTGAATGAGATCCTTGCTGAGTACAATAATCTGGGCTGTAGGTTATTTTCTTTCACCATTTTAAGTATGTCTTGCCATTCCCTCCTGGCTTGAAAGGTTTTTATCGAAAGATCAGCTGTTATCCTTATGCGAATTCCCTTGTGTGTTATTTGTTGTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTTGTGTTTGATCTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCTCCTTGGGTTTATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCAACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACCCCTATGATTCGAATGTTGGAGCATTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTTTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCCTTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTCATTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTGATTTCAAGATTTTGGATCAATTTCACTATCATTATTCAGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGAGCATTTATCCTGTTCCTTTATCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTAAATTTCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCGCTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGGACGCTTGTGTTGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTAGAGTGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATTAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTCCAGTTATTGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATCGATAAAACATCTACGTTAAAGATGAAAAGTTTCTCTACCGTGAGGGTCACCCAGAGAGGTTCACCGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAATCACTTCCTCATGTGCACTCCACAACTGGACCTCTCAGAGATGTTCACGGAGTTATACAGAGAAGAGAAGAAGGAGGAAGGAGACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAACTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGAGTCCAAAGGGAGAGAGAGCAGTTAAGCCAGTAATCTCATTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTTTGGAATTTCAAAAATATGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAAAATGAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAATATAGGTACAAAATTGATAACTAATACCAAAAAGCAAAAGTTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTAAAAAAAAGAAGATGAAAAAGAAAGAGAGAAAAACAAAAAACAAAACCAATGTCACAAAAATTATAAAGAAAATACAGGTACAAAATTGATATCAAATACCTAAAAGCATAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGGGGAAAAAAAGTCACAGAAATTATAAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGCTAAAGAAAAGAAAAAAAAAAACAAGGTCAAAAAATTATAAAAATATATATATATATGAAGTTTGCTGAAGAAAAAAAAATAGGGTCTTTTTTTTGTGCAAAGTAATAGGTTATAAAAGTGAAAATTAAAGGAATAATAGAGGACTTAAATTTTTTTTTAATTAAAAAAGAAAGAAAGAAAAAATGATCATAAAAGTAGTAAAAATATATCGAGGACTTTCTCTGGTTTTGTTGTGAGTATTGTGGGTTCAGCTCATTTTTGGCTAATTCCTTGGTCCGATTTATATTTCTCGAGATCTATAGGCCCCTTCCTATGTAGTCGGTAGTAACCACAGGGTTTTAATCTATTGCCTGTAGCTTCCAAGGCAGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGGTTTCCACCCTGACACAAAGAGGATGGTGGAGGACACTTTTTTTTTTTTAGGCTCACTTGTTCAGTTGCGCAGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCACAGTGCCTCAGCCACACTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGTTCCGCCGGGAACCATCCATGGCCAGCCCTGGGCTGCCTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCCCTCGGGTAGTCCTCAGAGGCACAGACTCAGCTGGGCCTGCATTTTGTGCCCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTAAGCGAGCACGATTGCTGCGACTTATCACCTCCCCGCCACTTGGTTATCTAGGTGTACAACCGGCGCACCTTCTCAGGCAGATGTTAACCATCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGAGATTGCCCCCTTCCAGCTCTGGCTGCGTGTCACCCGAAGGGGAAGGTCTGCAGCCGGCTATCTCTGTTTAGTCCTTTGTTCTGTGCGTGGGCCTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGTGTGGTAGATATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCACTCAGATAGCGCTCAGGGTATTCAGGCCAGGTCCTTACTCTAAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCCGCTTGCTAACGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGCAATCTGCGAGTTTTAATTGTTTATTTATTTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTTGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGACTCCCTTCCCGGGACAGAACTCCATCCCTCCCTCTTTTGTCTCTTATTTTGTCTTTTATATTTTTTTCCTACCTCCTTTCGAAGACTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCTGGCATTCAGAAGTTGTTTTGTGGAATTTACTCAGCATTTAAATGCTTTTTTTGATGAATTTGTGGGGGAGAAAGTGTTCTCCCCATCCTACTCCTCCGCCATCTTGGCTTCTCCCCCTTTAACAGTTTTATTTCAAGCCAACACCTGAGGCAAATATAAGGGATAAGGGATGAGGTCTTAAAAGTTGATCATGTGCTGTAGTAGGTACATATGTTGCCTTCAGCCTACCTCCTTCTTTGGAAACAGCCTCTCCTGACCTTCTTTTTCTACATTATTGTTTCCAGCCTGTCTTCTTTCACAGTACTAATTGGACCAGGTGTGGATCACTGAGCCAAGAAATTCAATCAGTGTTCACCTGGAGAAACAGAACTGAAGGAAGCGGACCTGGACCTGGGGCACAGAGGTGTCAGCATGTTCAAACACAAGCAAGTCAAAGTTACTGTCAATAGGAGAACGATCTAATCTCTGTCCTGCCCATGCACTACCAACAATCCTAAACCTACTATATCTACCAGAACAAAGAGGAATCGGATACCAAGACGGTCTTAACGCTGGATCCACTGCTTTGATTTTAGCAACTTCGGGGAAGAACTTAACCCTGATTCCTCTCTCTAAAGAAAAAGAAAAAAAAGAAAATGAAGAAGAAAATCCTGACTT TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178422 TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178503 EMBV3_21795 CTGAATGTACGGTGACTGAGAGGACAAGTGTATATGCCCAGAGGCTCCCACTCATAACTG Gene GeneID:513730|NOTCH2:XM_002686114:132_cdna Constitutive 0 NULL GeneID:513730 3 GENE NOTCH2 NULL Notch homolog 2 (Drosophila) EMBV3_36981 ATGGTCGCCAACAGCCACAACCTCATTGTCACTGTCAAGCCAGCCAATCAGCGCAATAAT Gene GeneID:524653|PARD6A:NM_001046274:300_cdna Constitutive 0 NULL GeneID:524653 18 GENE PARD6A MGC137799 par-6 partitioning defective 6 homolog alpha (C. elegans) EMBV3_15430 TGCTGCGTGCCCACCAAATTGACTCCCATCAGCATCTTGTACATCGACGCGGGCAATAAT Gene GeneID:407175|GDF6:NM_001001140:15_cdna Constitutive 0 NULL GeneID:407175 14 GENE GDF6 CDMP-2 growth differentiation factor 6 EMBV3_43498 CAGGGCAGGCGGCCTTGCCTCTCTTTCTCCGCGCTCAGGAGCTCTATTTATGAAGTCTCT Gene GeneID:517259|MICALL1:XM_002687921:130_cdna Constitutive 2 NULL GeneID:517259 5 GENE MICALL1 NULL MICAL-like 1 EMBV3_01988 CTGGAAAAGCTACCGGGGATGAGACAGGTGCTAAAGTTGAACGAGCTGATGGATATGAGC Gene GeneID:789997|LOC789997:XR_084001:65_cdna Constitutive 0 NULL GeneID:789997 21 PSEUDO LOC789997 NULL similar to Ribosomal protein S3A EMBV3_18703 GAAGAGAACCACGATCCCCTTTCTCCTCAGAGTGACAAAGGAAAAGGCCAGACCTCCGGG Variant GeneID:532940|CCDC28A:XM_002690280:37_cdna 424^623 2 EMBV3_22475 GeneID:532940 9 GENE CCDC28A NULL coiled-coil domain containing 28A EMBV3_28611 GCAGCATTCCCAGAGGATTCAGTACTCAAGTGAAAAATTAGATAATTTTCAAAGCTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24485 TGCAGTATCTGCGATGTGAGAAAAGGCACCTCCACCAGAAAACCTCGGATCAATTCCCAG Gene GeneID:616217|RYBP:XM_002696972:140_cdna UTR3_Alt 2 NULL GeneID:616217 22 GENE RYBP NULL RING1 and YY1 binding protein EMBV3_02656 AGATACCTGTTGCTGCACCCAGACCTGCTCCGATACATGAAGAACAGATTCCTGAGGTCT Gene GeneID:618655|ST6GALNAC1:XM_002696203:240_cdna Constitutive 0 NULL GeneID:618655 19 GENE ST6GALNAC1 NULL ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 EMBV3_34860 GTAGAGAGAGCGCATTTTCAGCCTCCACACGTTTACCTGTGCCTTTCATACAAAAGCCTC Gene GeneID:785926|LOC785926:XM_002707843:2_cdna Constitutive 0 NULL GeneID:785926 Un GENE LOC785926 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_33513 GCCACATTTCTAACTACACTCACCTTCCAGTTGCCCTACTGTGGCCCCAATGAAGTGGAT Gene GeneID:523680|LOC523680:XM_002699131:215_cdna Constitutive 0 NULL GeneID:523680 29 GENE LOC523680 NULL similar to olfactory receptor Olr1307 EMBV3_26017 GGAAGGTGCACGAGGCCCGGGCCGGTGTCCTGGCAAGCGGAGGAGGCGGCCCGGGAAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23435 ACAGCAGCAGTGGAAAAGCCAGGATATAGTCAGCTCCTGGGTGGCTTATCAGCTCCACTG Gene GeneID:100337044|LOC100337044:XM_002688895:157_cdna Constitutive 0 NULL GeneID:100337044 7 GENE LOC100337044 NULL CD97 antigen-like EMBV3_37866 GAGCGAATGTGACTGGCATGATGGGGTTAGCTGGCCTGAAGAAGGACATTGAGCGTATAA Gene GeneID:100299814|LOC100299814:XM_002688736:4_cdna Constitutive 0 NULL GeneID:100299814 7 GENE LOC100299814 NULL similar to asialoglycoprotein receptor 1 EMBV3_00248 GACAGTCTGCCAAATGGGGTTATTAGGTTTCTGACTTGCAGATATGCTTTGTGCTTGGAA Gene BVT0102_072714 + 0 NULL GK000011.2:14769813-14781532 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024155 TCONS_00024153 TCONS_00024156 TCONS_00024164 TCONS_00024157 TCONS_00024163 TCONS_00024152 TCONS_00024162 TCONS_00024158 TCONS_00024161 TCONS_00024154 1 XLOC_014455 Coding TCONS_00024152 XLOC_014455 Coding Coding SPAST 11:14714213-14771329 j TSS17797 4090 1 TCONS_00024152_3 614 19 0.928722752341767 0.00172332616403434 0.0021111093149295 0.000777524360554976 0.00102028411336165 0.000829963506604358 0.000507139232432713 0.00059871185833684 0.00141684921445764 0.00199517555509092 1.18286267695044e-08 1.49037817160143e-14 1.69730770998077e-11 3.16532643788755e-07 0.000255762804777237 4.01188172312447e-09 2.5794977532143e-07 6.67319232698163e-10 7.31396061063027e-10 0.00107832274698856 0.000346455983211091 6.74531864957936e-07 5.74583211818586e-120 5.08242550609422e-08 9.6568277541722e-33 0.000608270202624325 0.000840213745237402 0.000992089917614136 6.43565315956217e-12 8.94029561022492e-08 3.28562924915935e-05 XM_005212529.1 SPAST PREDICTED: Bos taurus spastin (SPAST), transcript variant X1, mRNA. 0.0 3883 99.86 0.528361858190709 XM_005264516.1 SPAST PREDICTED: Homo sapiens spastin (SPAST), transcript variant X1, 0.0 3030 92.43 0.505378973105134 TCONS_00024152_3 sp|A2VDN5|SPAST_BOVIN SPAST_BOVIN Spastin; 0.0 1260 100.00 0.998371335504886 4 coding 0 0 0 0 0.318129908716656 0.524337797461536 -0.105884007804274 0.340739065533225 GGAATGGCGAGCGGCGCACACGCGCACAAGGAGCTCAGGGCAACAAAGACGGCGACGTGCGCGCACGCGCCGGATAAAGAGTCGGGAGGGCTGCGCTTGCGCTCCCGGCCGCCGCTCTGAGCTACCGAACAGCCAAGAGGACAGAGAGAGGGAGGGGCAGGAGCCACCGACCGCCGGAGGAGAAGGGGTTGTGCTCCTGGACGAGCGAGGAGAAAGGGGCGGGGCCGGCGAGCAGCGCGCGGAGGTGCACCGCTCCTGGGACCGGGGCCGCCCGGGGGTCTGTGGCCCTTGCCGTCCCAGTGGCTGCCGCCGTCGCTTGGCCGCCGTCGGTCTGCGGGAGGCGGGTTATGGCGGCGGCGGCAGTGGGAGCTGTGAATGAATTCTCCGGGTGGACGAGGGAAGAAGAAAGGCTCCGGCGGCCCCAGCAGCCCGGTGCCTCCCAGGCCTCCGCCCCCTTGCCAGGCCCGCTCCCGTCCCGCCCCCAAGCCGGCCCCTCCGCCCCAATCGCCGCATAAGCGGAACCTGTACTACTTCTCCTACCCGCTGTTCTTAGGCTTCGCGCTGCTGCGCCTGGTCGCCTTCCACCTGGGGCTCCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGCCCTCATGGCCGCCAAGAGGAGCTCCGGGGCCGCGCCGGCCTCGGCGTCGCCCCCGGCACCGGTGCCAGGCGGGGAGGCCGAGCGCGTCCGAGCGTTCCACAAACAGGCCTTCGAGTACATCTCCGTCGCCCTGCGCATCGATGAGGACGAGAAAGTAGGACAAAAGGACCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTAGAAAAAGGAATAGCCGTCGTAGTTACAGGACAAGGTGAACAGTGTGAAAGAGCTAGACGTCTTCAGGCTAAAATGATGACTAATTTAGTTATGGCCAAGGACCGTTTACAACTATTAGAGAAGCTGCAACCAAGTTTGCAATTTTCCAAGTCACAAACGGACGTCTATAATGACAGTACTAACTTGACATGCCGTAATGGACATCTCCAGTCAGAAAGTGGAGCTGTTCCAAAAAGAAAAGATCCGTTAACACATGCTAGTAATTCACTGCCTCGTTCAAAAACAGTTATGAAAACTGGACCCACAGGTCTTTCAGGCCACCATAGAGCACCTAGTTGCAGTGGTTTATCCATGGTTTCTGGCGTGAGACAAGGACCTGGTTCTGCAGCTGCCACTCATAAGAGTACACCAAAAACAAATAGAACAAATAAGCCTTCTACCCCTACAACTGCTGCTCGTAAAAAGAAAGACTTGAAGAATTTTAGGAATGTGGACAGCAACCTTGCTAACCTTATAATGAATGAAATTGTGGACAATGGAACAGCTGTTAAATTTGATGATATAGCTGGTCAAGAGCTGGCAAAACAAGCATTGCAAGAAATTGTTATTCTTCCTTCTCTGAGACCTGAGTTGTTCACAGGGCTTAGGGCTCCTGCCAGAGGACTGTTACTCTTTGGCCCACCTGGAAATGGGAAAACAATGCTGGCTAAAGCAGTAGCTGCAGAATCTAATGCAACCTTCTTTAATATAAGTGCTGCAAGTTTAACTTCAAAATATGTAGGAGAAGGAGAGAAATTGGTGAGAGCTCTATTTGCTGTGGCTCGAGAACTTCAACCTTCCATAATTTTTATAGATGAAGTTGATAGTCTTTTGTGTGAAAGAAGAGAAGGAGAACATGATGCTAGCAGACGTCTAAAAACTGAATTTCTAATAGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTGCTTGTAATGGGTGCAACCAACAGGCCACAAGAGCTTGATGAAGCTGTTCTCAGGCGTTTTACCAAACGGGTTTATGTGTCTTTGCCAAATGAGGAGACACGACTACTTTTATTAAAAAATCTATTATGTAAACAAGGAAGCCCATTGACCCAAAAAGAACTAGCTCAACTTGCTAGAATGACCAACGGATACTCAGGCAGTGATCTAACAGCTTTGGCAAAGGATGCAGCACTGGGTCCTATCCGAGAACTGAAACCAGAACAAGTGAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACCGAATCCTTAAAAAAGATAAAACGCAGTGTGAGCCCTCAAACCTTAGAAGCATACATACGTTGGAACAAGGACTTTGGAGATACCACTGTATGAAAGTGTTCCAGAGACGGGGAATGGTAGAAGACACAGAGCCTTTGGTGGATAATTACAAGCCAGTGGATCTACCATGTTTTATTAATCCCTCCAATGAAACTTTAAAAAATTACTGAATTTTTATACATTGCATACATTTTATAGGTTTCTTGTGCTCACTTTGTTAACTAAAAAGTTTTAGTCTGTTAATCTGCCTTTTGTTCCCCAAAAATGTACAGTAATTCCATTTCTTGTTTGTATGTGTAGGTTTTTGTTATAAAAATGTCCTTGTAGGAAGTAGAGACTCATATCAAGGCCTTCTAAATATTGTAATAAAGGCAAATGGATATTTGCCATTAGTTTACTGGTTAAAAGTTTGTTTACAGAAATCGTCTTTGGTGCTTTTATGTAAAATGTCATGGGTGGAAAGAATAATTTTATAGTAGTAACAAAATTTTTTTTTTTTTTAGGAAAAATATCTTTGGTTTTGAGAAAATATATTAAAGTTAACTTTCCCCCACTAGATAAGAATTTTATAATGAAGAAACCCATACTTCTTAACTTTACTCTTTCTTATCTTAAAGATTTATCTAAATGTAGAAGATGTATGATTATATGCTGTTTGTAGCTATAACTTAAATCATGTCTCCTCTAATCATAGAACTCCCTGGATAATAAAAATGAGGGTTGAGATAAATAGAAAAAAAAATTTTAAGCCAAAACCATGATATTTTAGGTCATGAGTAGTATCTTTTTAAGGTCTCAAACATTATAGCATCCATTATAAAATACTGATAATGAAAGATGATGAAAATATACACAATAAGTATGATGAACATCCCAAATTAAAACATTTTCAATAAAGCTCATGAAATTTCATTTTTAAATTTTCATTTGGAAAAAGATTATTGATGAGTAGTAAGTTGTATTAAAAGTCCATGTGCTTTAAACTTACAACTTTTAAACTACAAACTCCTTTAAAATTGTCATAATATTATATACATTAATTGTAGCTCATTTATTAGGAAAAGTTTTAGATAACAGACTTCACATGTTACGTAAATTAATATTGTCATAAACATTGAGTCAGAATTATAGTACTGTATGCACATCCATCTATGGAAGTTAATTTCCTGATCAAGTCTGAAATTGAACTTAGTGCTAGAGAACAATTTTCTTTGACTTACATGACCTAAGTTTTATTTTAAGCTGTGTTTCTCTCATAGAAGGGCCATAAAAGTAGAGTAATTATATGGTAGGACGTGTAAGGTTTTGGTTTGATCTTTTTCAATAAAGATAGCAGTTGCTGAGGATTTCAGAAATAATATTAGACTTAGATTGTGACCTTGTAGATTTTGCATTGAGCTCTGTGTCATATTATTTAGTAAAAGGTAATGTTTAAACCTTAGTGTGCTCTTCATGTTACTATGGCAGAGTTTTGTAAACTAAATTAAAACTTACTGATGTACTGGACTTTGAGCCAATGGAAAGAATCAGTATTCTCTTTCCAGATATCTTAAGGGTAAAAGCTTATTCTAAGACAGTCTGCCAAATGGGGTTATTAGGTTTCTGACTTGCAGATATGCTTTGTGCTTGGAAAGAATTGGAGGAAAAGCAGATACTAGAACTCTAATTTAATATACAGCAGTCTTTGTTTATAGTGTAAAATTCATTATATTTTGTACAAAAACTAATTCTTTTGGCAGAATGAACCATTTACAGTTTGTTTTTGGACTTTGAGTCAACGGATTTTCCTTCAAATACTTGTCTGAGTTTTACTCTGGACTTTTGTACTTTTCTTCAGAAGAAATGAATTAAAAGATTCAGCTGCATAAGTGAGTTTTTATCCTAATGGATTGGAAATAAATTATAAACTTTATTTTGCCTTTAA EMBV3_18500 CCATCTCCCAGAAGGGCTTTATACCACAACCCACCATTGTCCATGGGGCAGTATTTGCAA Gene GeneID:540396|HIVEP2:XM_002690289:11_cdna UTR3_Alt 2 NULL GeneID:540396 9 GENE HIVEP2 NULL human immunodeficiency virus type I enhancer binding protein 2 EMBV3_05028 GACTTTGTGGTATGATGTGCTTGTGAAAAAGAACTTTAAATATTTATAAGGGTTCCTGGG Gene GeneID:519014|ARL6:NM_001075782:93_cdna Constitutive 2 NULL GeneID:519014 1 GENE ARL6 MGC140307 ADP-ribosylation factor-like 6 EMBV3_43397 GGGATCCTGCAGACCCATCGAGCCGTGCTGGAAATGAAGGTGAACTACAAGGGCTATAAT Gene GeneID:532145|MGC148542:NM_001102143:308_cdna Constitutive 0 NULL GeneID:532145 23 GENE MGC148542 NULL hypothetical LOC532145 EMBV3_31685 GCAGCAGTAGAGATAGGAGATATTGGAGAAGTAGGTCTGTAGTCAGAGGTGAAGAAGAGC Gene BVV0102_284994 + 0 NULL GK000030.2:91349385-91377269 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28078 TGTGTTATCATCCTCGTTGCCTCCCCTTCCCACTGCTCTGTGCCCTTGTGAACTGTCTAT Gene BVV0102_085543 + 0 NULL GK000022.2:13302317-13336572 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126135 1 XLOC_077377 Coding TCONS_00126135 XLOC_077377 Coding Coding ENTPD3 22:13271525-13305747 j TSS94699 2710 1 TCONS_00126135_7 529 11 0.921130300108121 6.13865807126018e-11 1.1123538871553e-05 5.5066768640283e-11 1.27292746409806e-05 0 0 0 0 0.000107396846395159 0 0 0 0 0 1.860016508856e-11 0.000116362314304117 0 0.00121152887938868 0.000121720655438746 5.30733941105168e-06 0 6.57182108849882e-05 3.58030342522879e-05 0.000146667756447086 0.000188199553251518 2.85968468795417e-05 1.4794645500724e-05 0 0 0 XM_005222394.1 ENTPD3 PREDICTED: Bos taurus ectonucleoside triphosphate diphosphohydrolase 3 (ENTPD3), transcript variant X1, mRNA. 0.0 4888 100.00 0.999630996309963 NM_001248.2 ENTPD3 Homo sapiens ectonucleoside triphosphate diphosphohydrolase 3 (ENTPD3), mRNA. 0.0 2372 79.82 0.992250922509225 TCONS_00126135_7 sp|O75355|ENTP3_HUMAN ENTP3_HUMAN Ectonucleoside triphosphate diphosphohydrolase 3; 0.0 854 79.58 0.998109640831758 1 coding 0 0 0 0 -0.13922328554151 0.461462345061106 0.0128680521714869 0.857648658191058 CGGTCGTCTGCGCACAGCTGGAAGGAGAGATGTTCACGGTGCTGACCCGCCAACCTTGTGAGCAAGCAGGCCTCAAGGTCCTCTCCCGAACTCCAGCCATCATCGCCTTGGTGGTCTTGTTTTTGAGCATTGTGGTACTTATGGCTATCACACTCATCCAGACACACCAGAAAGAGGTCCTTTTTCCAGGACCAAAGTATGGAATTGTACTTGATGCCGGGTCTTCCAGAACCACAATCTACGTGTATCAATGGCCAGCAGAGAAGGCGAATAATACTGGAGTGGTCAGTCAAAGCTTCAAATGCAACGTGAAAGGCTCTGGGATCTCCAACTATGCGGAAAACCCCCAAGATGCCCCCAAAGCCTTTGAGGATTGCATGCAAAAAGTCAAGGGGCACATTCCAGTCAGTCTCCATGGATCCACCTGCGTTTACCTGGGGGCCACAGCTGGGATGCGATTACTGAGGTTGCAAAACGAAACAGCAGCTAATGAAGTCCTTGAGAGCATTGAAAACTACTTCAAGTCTCAGCCCTTTGATTTTAGGGATGCTCAAATCATTTCTGGGCAAGAGGAAGGGATATATGGATGGATTACAGCCAACTATTTAATGGGAAATTTCCTGGAGAAGAGCCTGTGGCATATGTGGGTGCATCCGAGTGGAAAGGAGACCACAGGGGCCCTGGATTTGGGTGGTGCCTCCACCCAAATATCCTTCGCAGCAGAAGAGAAGGTGCGGCTGAACACCAGTGACATCATGAAGGTGACCCTGTATGGCTACGAATACACGCTGTACACACACAGCTTCCAGTGCTATGGCCGGAACGAGGCTGAGAAGAGGTTTCTGGCAACCCTCCTTCAGGATTATACCACTGAAACCACGCTCACCAACCCTTGTTACCCTCAGAATTACATCACCACCTTCACTGAGGCACAGGTGTTTGGCAGCCTGTGTACAGAGGACCTGAGACCTGAAAGATATAATCCCAACAACACCATCACTTTTGAAGGAACCGGGGACCCATCACTGTGTAGGGAAAAGGTGGCTTCCCTATTCAACTTCAGCGCTTGCCATGATCACGAAGCTTGTTCCTTTGATGGGGTGTATCAGCCAAGAGTTAAAGGGTCATTTGTGGCTTTTGCAGGATTCTACTATACAGCCAATGCTTTCAACCTTTCAGGTAGCTTTTCTCTGCACGCCTTCAACTTGAGCACCTGGAATTTCTGCTCAAAGAATTGGAATCAGCTCCCACTGCTGCTGCCTCAGTTTGATGAGCAGTATGCACGCTCCTACTGCTTCTCGGCCCACTATATCTACCATTTGCTTGTAAGTGGATACAAATTCACCGAGGAGAGCTGGCCCCAAATACATTTTAAAAAGGAAGTGGGGAACAGCAGCATAGCCTGGTCTCTTGGCTACATGCTCAGCCTGACCAACCAGATCCCAGCCGAAAGCCCCCTCATCCGCCTGCCTATCAAGCCATCTGCCTTCGTGGGCACCCTCGCCTTCTTTGCAGCAGTGGCCTTGCTGTGTCTGACATATCTCGTATACTTGTGTGTGTTGTCCAGGAATCAGAGGCGCTCCCAGCATGCCTTGGACAACATGGTGGACTCTGAGTGAGCCTCACAGAGTGGTTCCTAGAGCCTGAGAGCTGCCCATAACCAGCTTGGGGGGCACCAGACAATGCAAGCAAAATGTCCATCTTCGGGAAACACAGCTAAAGTCCAATGCCTAGGTCCTGTGCCTCTCAGATACTGATTTATGTCAAAACACCTCTTGGGAAGTCCCTCAACTGTTCTGTGCACATTCCTCTGCCAGAGACCCCGCCACCCACTAGCTGACCTATTGGGGAACAGAGGAGAGACAGGCCATCAAGGTCAGCCTCCTTATTCCAAGTGTCCCACAGGAAGAGTAAGTTGAGAAGATGACAGATGAAATGTGGACGAGTTGACCTCAGGGCTCAGTTTGCATTTTCCCTCCTTCAAAAATGCCATAGTCCTCCCAGTAGGATTGGAAATTGGCAGGTGTCTAGTAAGCATCTGGTCCAATCAAATATCTCATTTTATGGCTTCCTCTCATTGGTCCTTAACTAAGAATTTCCTTGACAACCATTAATAACATTGAGCTCCCTCAGCTTGGCAGAATATTGTGTCTAGGGGAAAATCCTCCTTCACCCCCAAGGACAGTGGCCACAGCCAAGCTTCTGTCATGCAGGCAGAACCTGAAGGGCAGAGCCACACAGGACATCCACCAGAACACTACAGGCCATTCCTGAAGTAGGGTTCCCTCTCAGGGCTCTGGTCATTAGATCGCCACCTGCGTGTGTTATCATCCTCGTTGCCTCCCCTTCCCACTGCTCTGTGCCCTTGTGAACTGTCTATTCCTAGCAAGGCTATCATGCTCCAGATCATTTTGTCTTTGCTAGGCTTTTGCTTAGGGTTGTCTTTCCATCATTAGCACCCTGTGTATATTTCACCCACCATTCCCACAGGGCCACCTGATGCTGTCACAGGACATCCTCTTCTCTGATTTGCTTACCAATCACTTTCCTAGATGGTAGGCCTTTGCACACAGTAGCCATAGTTCCTGACTTTGAGGGCAGAAAGGAAGCTGCAGGGATATTTAACTCCAAAGTGGGAAGGGACTCTAGCAAGTCCAATGGCTGCAAAGTAAAAATCAACATTCTCTCAGATTATAGCTTGTTCACTGAG EMBV3_17290 AATACGAGGAAGTCTGGTGTGAAGACGGATCAAGCATGGGTACCTGGCTGAACATTGTCC Gene BVT0102_349791 + 0 NULL GK000003.2:84712072-84749639 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28160 GGTCAGCTGGACGGTCTGGTAAACAAATGGAACCTTGAGTTAGAGGATCAAGAGAAATAC Gene GeneID:516074|LOC516074:XM_002699882:119_cdna Constitutive 0 NULL GeneID:516074 X GENE LOC516074 NULL similar to nucleoporin 62 EMBV3_07900 TGCCTACGATCTTTCCTTTTGGTCCGTGGACGAGCGGTGCTCAGCGACCGGGACCAGCGG Variant GeneID:531074|KIF14:XM_002694237:183_cdna 237^824 1 EMBV3_19695 GeneID:531074 16 GENE KIF14 NULL kinesin family member 14 EMBV3_03627 AAACTCAACATCAGCTTCGCCGGTCACTCTTCCATCAGGGCCGATCTCAATGTGGACTCT Gene GeneID:100295417|LOC100295417:XM_002698833:79_cdna Constitutive 0 NULL GeneID:100295417 28 GENE LOC100295417 NULL hypothetical protein LOC100295417 EMBV3_42913 TGGGTGACGATGGAGGGAGACTTTGTGCTTATTTTGGCCATCTTACCCAGCCACCTGGGG Gene GeneID:533103|SPHK2:XM_002695198:889_cdna Constitutive 1 NULL GeneID:533103 18 GENE SPHK2 NULL sphingosine kinase 2 EMBV3_13802 ATGTAGGATTTCAGCGTCAATATTGAAGTAATCAGATTTCAGTGGTTGGCGCAGCCTCGC Gene BVV0102_049948 + 0 NULL GK000027.2:37017425-37055088 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158382 1 XLOC_096836 NonCoding TCONS_00158382 XLOC_096836 NonCoding NonCoding - 27:37054320-37054641 - TSS118707 321 1 TCONS_00158382_1 40 1 0 0 0 0 0 0 0 0 3.68518343336628e-05 0.000270378438876721 0 4.27885769851333e-05 0 0 0 0 0.000493674768360629 0 0 0 0 0 0 0 0 0 0 0 2.99226365980242e-05 1.51233587650768e-05 0 XM_005226114.1 SLC20A2 PREDICTED: Bos taurus solute carrier family 20 (phosphate transporter), member 2 (SLC20A2), transcript variant X2, mRNA. 4e-164 580 100.00 0.996884735202492 0 noncoding 0 0 0 0 0.0720100952458071 0.522666343863837 0.0456765401857978 0.359559106099716 GCTCAAAATGAACAGTTAAGACCTCAACCTCGTAGATAAGGGGCCATTTACTTGCGAGGCTGCGCCAACCACTGAAATCTGATTACTTCAATATTGACGCTGAAATCCTACATAAATTCATTACATGTCTCTTGCCGGAATTTTTTTTGCAAGTCCTTACACACACACAAAATTATACCCCAAAGCCACTTAAACTGACATGACTACATCATCCTGGGCGCATCCGGCTTTTAAAACATTTCAGTCGCTTCGGCCACGCATCATTTACGATGACAGGGAATCACTGACGATGACAGGGAAAGCGCAAAAGCCAGTTTGGAG TCONS_00155602 TCONS_00155603 TCONS_00155604 . 5' 448 TCONS_00155602 TCONS_00155603 TCONS_00155604 . 5' 448 EMBV3_14422 TGTCTTCAGGCCCTCAGCTTTGTCACCAGATGATGCTTACCCAGGCAGTATAACCCCTCT Gene BVT0102_183495 - 0 NULL GK000004.2:70414319-71118137 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188508 1 XLOC_114551 NonCoding TCONS_00188508 XLOC_114551 NonCoding NonCoding - 4:70931961-70932365 - TSS140876 404 0.292079207920792 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0145064635326888 0.000124212338033184 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0910379607986888 0.548515274765801 0.0197873209949957 0.805397323669355 GTGTGAGGAGGAGGGGGCTGAGCGGTGGGCTTCAGAAACTAGTGTGTGAGGCCCACCAAGGTTTTACCATACATGTCAGATGCTGGGTAGAGTACAGGGCACTTCCACTAAATTCTCTTCTTTGGTCCACACCAGTTCTGTTGGGTAACGAGGGAAGTATTGGCATGCCCATTTTACAAATGAGGATGCTAGAGGGTTGACTTGGCCAAGGGGAAGCCCGAGAGGGGTTATACTGCCTGGGTAAGCATCATCTGGTGACAAAGCTGAGGGCCTGAAGACAAGAGGGAGGTTCTGAGCCAAACTCTGCTTGTGGGTTTTCTTATCTGTGTTCATGCTCGAGAAGGCCCCGTGACAGAGTTGGTTGCTGAGGGTCTGACATCTGAGGACATATTAGGTAGCATTCT TCONS_00181955 . 5' 185773 TCONS_00181955 . 5' 185773 EMBV3_27093 AGTGAAAGTGAGAATTCAGAAGTAGAAAATATTTTTTTTAGCAAATAATTTCATGGTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07871 TGACATGGACTTGTGCTGGGGATTGGTCAGACTTTCCAGGAGACTCTTCTGCTTCAGACT Variant GeneID:616216|OOSP1:NM_001038687:20_cdna 110^291 1 EMBV3_10927 GeneID:616216 15 GENE OOSP1 NULL oocyte-secreted protein 1 EMBV3_38028 GCGGGCACCTTCCTCAGTCGTGCAGTGCAGATGCCAGGATAGAAGAATTTGTTTATGAGA Variant GeneID:533918|SH3GLB1:NM_001077993:65_cdna 229^370 1 EMBV3_35833 GeneID:533918 3 GENE SH3GLB1 NULL SH3-domain GRB2-like endophilin B1 EMBV3_02861 TGGGGGTCGGGACCTTCGGCAAAGTGAAGGTTGGCAAACATGAATTGACTGGGCATAAAG Variant GeneID:540404|PRKAA1:NM_001109802:83_cdna 116^247 3 EMBV3_28033 GeneID:540404 20 GENE PRKAA1 MGC165837 protein kinase, AMP-activated, alpha 1 catalytic subunit EMBV3_02693 GACCAAGTTCACCGCCATCAAGAATAAGTATGCAAGCAGCAAACTCCTGAAGATCAGCAC Gene GeneID:281668|CCNB2:NM_174264:19_cdna Constitutive 0 NULL GeneID:281668 10 GENE CCNB2 MGC140694 cyclin B2 EMBV3_41433 AGACTAGAGGTAGCCATTCAGCTGTTGCTGGGGTGTCAGAGTGATGCCGAGAGCTTCCTG Gene GeneID:512868|SMYD4:XM_002695685:225_cdna UTR3_Alt 2 NULL GeneID:512868 19 GENE SMYD4 NULL SET and MYND domain containing 4 EMBV3_07429 AATACTGGATTTGCAAGCACCCATCATGAGCAGCTTCATGGAGTTTGGCCACAAGATGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41248 ACTAGTGAAGAGAAGCACAGGACACATGCAGGGCTCCCCGATGAAGATGGATGGCAGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42412 GTGGAATACTCTATCTCTACTACATTCCAAAGACTGTGAACACAACAATACAATTCTCCT Variant GeneID:613753|LY96:NM_001046517:73_cdna 206^334 1 EMBV3_05560 GeneID:613753 14 GENE LY96 MD-2 MD2 lymphocyte antigen 96 EMBV3_04418 GCCAGTACAGGTTCACGGTTTCAGACTTGATGAGAATGGAGAAGATCGTATTGGAGAAGG Gene GeneID:789192|LOC789192:XM_002683813:41_cdna Constitutive 0 NULL GeneID:789192 25 GENE LOC789192 NULL similar to cyclin G1 EMBV3_19240 GAATACTCCCATTACTCTTAGACCGGATCAAACGCCCTCGGATCTCTCTGTCACCCCCAT Gene BVV0102_049340 + 0 NULL GK000029.2:45248116-45274393 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164012 TCONS_00164013 TCONS_00164010 TCONS_00164014 TCONS_00164009 TCONS_00164011 1 XLOC_100104 Coding TCONS_00164009 XLOC_100104 NonCoding Coding CCS 29:45269097-45276636 j TSS122818 5793 2 TCONS_00164009_5 125 0.262558259968928 3 0.231891748474396 0.00406988640478616 0.00257573492163238 0.00260110616374203 0.00135042246021443 0.00202173427486183 0.000482763797169863 0.00122914182466363 0.00134810817505984 0.00154481650730634 1.07135658672139e-14 2.75408712409324e-05 1.87890890735746e-62 3.54414955988972e-43 2.89539071030365e-05 0.00152627242731618 0.000251662938935344 2.32188106644373e-24 0.000381392680337039 0.00165284305895079 0.00199977656935056 0.00176385407524409 3.01081355827892e-06 0.00013608800964671 0.000247657495964438 0.0051763158271072 0.00167227653433961 0.00306156325689237 3.69432600170187e-05 3.30341175873069e-05 8.12468373101916e-17 XM_005197362.1 CCDC87 PREDICTED: Bos taurus coiled-coil domain containing 87 (CCDC87), 0.0 6138 100.00 0.587260486794407 NM_018219.2 CCDC87 Homo sapiens coiled-coil domain containing 87 (CCDC87), mRNA. 0.0 2298 78.18 0.488348006214397 0 noncoding GGTAAAATGGTGATTAAAATACATGCTTCACGAGAAGTCTAAGAGATTGTGCAGAGAGAGTGTTCTCACTGAACTCAGTAAGTGCTAACTCACTACTAACATGTCAGCTAAATTTCCTGAATAGGTAAAGAGCTCAGAAAAATCAAGAAAGCAAAATAGTCAAAAACAATAGAAAAGTAGGCAAAGGGCTTGAGTATTTTACAGAAAAAAACCAACCAACCAACCAACTAGGGCTTCCCTGGTGATTCAGTGGTAAAAAAATCTGCCAGCCAACGCAGGAGACATGGATTCGATCTCTGGCGCAGGAAGATCCTACACGCAAGGAACAACGAAGCCCGCGTGCTGCAACCATTGAGCCTGTGCTCTAGGGTCCGAGTGGCACAACTACTGAAGCCTTAGCACCCTAAAGCCTGTGCTCAAGAGAAGCCACCACAAGGAGAAGCCCGCACTCCACAATCAGATGAGCCCCTGCTTGCCGAAACTAGAGAAACCCAGCACAGCCAAACAATAAAGTACTTAGAAGAGAAAAAACGCCTTTAAACTTAAAAAAGATGCAACTTCACTCAGAGAGAGGTGAGAACACAACTCAAATGAGATCCTATTTTTTCACGTATTACATGACAAAGATGAAACTTTCTGATAATACTTCTAGTGAGAGTGGGGAATTATTACTATTGTCAGGCAGTGTGGCAGATAATGCAAATGCTTACAGCCTTTGTGTAGCCTCAGTAATACCTATCAAAACTACAAATGCTGGGACTTTCCCGGCAGTCCAGTGGTTAAGACGCTGCATTTCCAAAGCAGGGGGTGAGGTTGGCTCCCTGGTGGGGGAACTAAGATCCCACATGCCGCATGGCATGGCCAAATAGAAGGAAAAAAAAAAAAAAATATATATATATATATATATATATACTTATGCTTAGATATAATTCCACTTCGAGAAACTTTAAACCATAGAAACAGCTGCACATAGTGAATAAACGAACAAGGATTTTTTTAGAGCATTGTCTGTGTGTGTAAGATCTTAGTTCTCTGATCAGGAATAAAACCTGCGCCCCTTGCATTGGAAGCTCAGTCTGAATCACTGGACAGCCAAAGAAGCCCATGTCTTTGTTTGTAATAAGGGGCTGATTAAGCAAAATAAAAATACACACAGTAGGATATTCTATAGCAACCAAAACAAATAAAGCAGCTCTATGTGTATCAATGTGGAATGAGCTTGGGGCAAATTAGGATAAAATTGAAAGGGGCGAAACAGGAGACAATGCTACTGCTGGTGCCGCTGCGGACACAAGGATGAACAATATATTCACGCGTGTTCATACACACATCGGCTCTCTCTAAAATAATTTTCACATAATCCAACCTGCCCCCCTTCCTTGCCATGACCCCTCTGACTCATGTCTTTCTCCTCCTCGCTCTGCTCCACCCACACTGGCCACTTTGCCTTTCTGGAACACCCCAAGCATCCGCCTGCCTTAGCTGGCGGGAACACTGTTGTCCCGGATGTCCACAGGGCTCACTTCTTCCCCTCCTTCAAGCCTCTGCTCAAATCTCCCCTTCCCGGCGAGGCCTGCGTGGACTACCCCAGTAAAATCACATCCTTCACCCTGTTTCCTCTTGCCCTCCTCTGCCTTTTCTTTTTTCCAGAGTACGTATCATCATCCTCCATTCTATTATTCAATGTGCTTCCGTACTGTGTTTATGGTCTACAGTCTGTGTTCCCTCAGGAGAATGTAAACTTTACAAAGGGTAAGGGTCTTGGTTTTGTTCAGTGATAAAGACCCAGCATGAGTACCTAGCTGGTATTCAGTAAATATCTGCTTTTGAATAAGGGAATGGAAAGATACACAAGCAACTGGCAACAGTTGTCACCACAAGGAGAACGGGGTTACTGAAGGGAAGGATGGGAAGAAACACTTTTCAGTGCACACCCTTGTGTACTTTGTACCAGGTGCTTGTATGAATTGGTAAATAAATTTAATGGAAAATTTTAGCTCTGCCAACGGTGTGCTAGACCTGGAAGAAGTGACAGCCAACTCCTTTATCTGACACAGGAAGGTCCAGATGTACAGCAGTTAGGTACTTTGCCCAAGGTTACACAGGCAGGACTTAAACCCACATCTACTAACCCAGAGCATTAGCTCTTAGTTATCATGCCATTGAGCCTCTTGGCTTGGTGTTCTAATCAGTCAATCTAATGGCTCGTGATAGAAACGCTGAGCTGAGGTGTTCCACGGGGCATGGTTTCTGTCTGTCTAACATTTCCTATTACAATGAACTTCAAGGGATAGTCTTAGTTCTTTTGATACATGAGACTTTGGCTGTAATGTGCATGGTTTGACAGAAATGGGACTACTGGGCTTGGGGCTTCTTTTATGAGAACTTCTTGGTCAAAATACAGTGTTAATGTCAGTCCCTTGGTAGCTGGAATGCAGGTTTCCTGAACTCTACCCTCCCAGATACTTCTTCTTTCAAAGGAGTCAAGAGGTCTGGATGAGCTGCTGTGTGTATGGGGGTGACAGAGAGATCCGAGGGCGCTTGATCCGGTCAAAGAGTAATGGGAGTATTCCCTGGGGCTACTAAAGGCTGGCTGCTGAGCTTCCTGGACAGGACTGACTGATGGGAGGCCCTTTTGGCCCGGGTTAGGTGGCGGACCCGCCGCTGCTGCTGCAGCCAGTAGAGCATCTCCACTTTGTCGTGCTTCATCTTGTCCAGGTAGCGCCGCCCCTTGAAGGTCACCGGCTCACCAAAGACTAACTCGATCTCCTCCAGGAGGGGAACCAAAGGAGCCTCCACCATACTGAGCTTCCTTTGGAGACGGCCGCGGATCTGATTCTCCTCCAGGAAGCGACTCAGGCCCACATCAGTCTTTTGGAAGAAGCGGTTAGGGTCAGAGGCTTGCCGCTCAAACCACTCCAGTCTCCCCAGCAGTATCTCCCGCAGCTGGATGGGCTGCAAGGCCCGCTCCCAGGCACTCACCAGTGCCGGCAGCTGCCTCAGGCGGGCGTTGGAGCTGTATTTGATGGCCATGTCCAGCCGGTCCTTCTCTGGAACGTCAAGCATGGACCAAACCCGCTCCAGACGCTTCTGCAGGCTCAGGATTTTGTGAGAATCTTCCAGGAGGCTGCTCTTAGTTTCTAGCCTGTGTTCCAGCACCGTGTCCCAATCCCACTCTCCTGGCACAAAATCTGGTTCGTCATCTTCTAGCAAGGGGGGTGGGTGTTGGATCTTTATGGACTCTTTGATAGGGGCCACGGTCTCCACAGGACCCTCCTCTTCATACATTTGGAAGATGACATGGAGGAAATCTGTCTCCTGGGTGGTGAGGTACTTAAAGTAGTCACCCACAGACAAAGTGCTTTTCCACCAGTTCAGCCATCTGGCCCTGTTTGACCACCTGTCCCAGCTTTTACTTGCTTGGAGTGATGTGAAGGAGGATATCTTATCTGCATTGGACTGTAAAGTGCTTGATTTTTGGGGATAAAGTTCAGCCAGCTTGGTGTTGATGATACGATGCTGTTTTTCTTGACGTAGGAAGGCTGAGGACAGGAAGGCTGACCAGTCTTTATTGGCTGCAGGCTCAACCAGGGGCCCCTGGTCAAAAGTGAAGTGGTTGTTAGAGACACGGCTCATCAGCTCCTTGTAGACTTCCCTGATGCTACTGCCAAAAGTGCGATCTATATCCATTTGCTCGATAAGTTTGGGTTCCAGTTCACCAGCCAGGTGGTTGTATAGCACACCGGCCGGCTCAATGTGGAAGGAATCCAAAAAATTTCTTCCTGAGACCTGTACAGCAGCTATCTGGACCATCTGATTTTTTAGCTTCAAAGTAACAGTCACTGGCTGTGGTTCAAGTGGAGGGGGTTTAGGGGATTGGAGGCCCCGATGTTCCGAGGCCTCTTGCTCCTCGAGGCTGTTCAACTTTCTCTGCAGCTCTTCTAGGTGATGGGTAGTAGCTGGGCGGTAGGTCAGAGCCCCCAGGAGTGGGGGCAGCCCTGAGTCCAGCGGTGAGTACTGAGACCACCCCAGCTGCATATGCTTCATCATCTGCTTCAGGTCCTCAGCCACCGTGTCCCTTGCCAGCTCTGGTTTGCTCTCTGCCACCAGGACCAGTGGGGTTAAGGGGCGAGGACTGAGTGGAGGAAGGCCCAGCTCATCTGCTAGCCTCCAACCCTCACGCAGAGAGGGCATGGACTGGCCCCTCTGGAGCTGGGAGTAGAGGGGCAAGTGCGAGGTGGGGGGAGCCCGGCTGCGGGGAGCCACAGAGGTCCCAGACAGTGATGCAATCTGTGAAGTGAAGGTGCTTTCTCTCCTCTTTTGCATGGAGGACAGCCAGCGCAGAGGCTTCTTCTTCTTCAGCTGGGGAATGGACTTCAATTCCTTCATTGGATCCTTTTCAGGCTCACTGACAAGGTCTCGCGGGCGGCTGAGTTGGATGAGGTAGTTCAGGCTGAGGTTGAAATGTGGCACTTGGGTGACGCCAGTGATGTGATGCCATGGGACCTGGAAGAGCCTGTAAGCCCCAAGGCCAGCGGCGCGCAGTCTGGGCGCGGAGACTCGGGCCTGCTCTTCTTTGAGCAGGGCAAGGAAGTCAGAGAGCAGGCTCCGGTAGACGTCGGGGCCGGTGAGGAAAACTGTGCAGTCCCTGGCGAGGCTGGCGGCCAAGCGGGTAAGCGTGGCTGATTCAGTGAAGACAACTGCGGAGGTCGACATGAGCTTCTGGAGGTGCAGGTAGCGTACGAAGAGCTGCTCGCAGCTGAGCAGCACGTAGATCAGGAGCCGCTTTCGTAGCCTCTGATTGTTCAGGTGACTCATGCCAAGTTCGGTGGGGGGCTCCTGCCAGCCGCACTTTAGCTCGTCCAGGATGACCTCGGTGAAACGGAGCCGTACCTTGTGAGGCGCCCGCGCCTCCAGGCCGCTTTTGGTCAGCCGCTCGGCTACCTGGCGGCAGACCAACTCCGCCGTCAGCCGTGGAACCGGTAAAGGCAGTAGCATCGGGACCTCCTGCGAGAGGTGCTCCTGAGACGCTGTGCGTGTCGTCCTGCGGGGGAAGAGCGACAACGGACGCAGCAACCGGTGGTAAATCCGCTGGAATTCGGGGTCCAGCTTATACGGCTCCATCTTAAGACGAGGCGGTGCCGACAGCGCCGGCTGCTCTAGCGGTTACTAAGGTAACGAGGGGCCAGCGGGCCCAAGTGCGCCTGCGCAATCCCTGCCCACCGTCGCGTGGATGCGGGAAGGAGCAGAGCCTTGCGTGCGCGCGCACCGGAAGGCGGGGCAAGGAGTGGCTTCCGGGGCTCCGCCTCCCCCTCCCGCGGCGCGGCTCCGGGCTGGCTCTTCAGTTCCTGCCTTCGGGCGATAGCTGGATCCTGGATGGCTTCGGACTCGGAGGACCGCGGGACTGCCTGCACGCTGGAGTTCGCGGTGCAGATGACCTGTCAGAGCTGCGTGGACGCGGTGCGCACGTCCCTGCAAGGGATCGCAGGCTTCTTCACTCATTAGTTCATCTAGTTCTGAAGGGTTACTGAATGTCATCTTGATCAGCCAACCATCTTCATAACAGCATCTGTTGACAAGTCCTGGATTTTCTGCAGGAGCTTCATTCATTTAAGTAACTTCTCCTGATGGAGGAGAACTAGTAGCTTTCACACTTTCCACAGCACCAGACTCCTCTTGTTTGTTCAATTTTGTCCCCACTCCAGGCAGACTATAGGAAATGACGTCTCCCAAAGCTTCCTGTGCAAATATGCTGATTCTCATTGTTCCAACACCGTTTCCTGTTGTTCGTCA EMBV3_33499 AGACACTGATGTTGCTGGAGGCAGGGAGGTAGGCAGTCACTAATAACTACAGCTGAGCAG Gene BVV0102_318100 - 1 EMBV3_34406 GK000001.2:16871078-18058708 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10559 CAAGGTGAAGGAGTGGGTGGAGCCGCTGGTGAACAGGACCAGAGAGAAGTGGAAGTGGTT Gene GeneID:618041|APOC4:NM_001034807:439_cdna Constitutive 0 NULL GeneID:618041 18 GENE APOC4 MGC127723 apolipoprotein C-IV EMBV3_37904 AACCGGGGCTGCCGCGGGGAAGAACTACTGGCCCGCACCATCCGCGAATTTGATGAGCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42429 GGCGTTTACTTGATAAACAATGTTGTGTTAGTCTCAGATGTACAGCAAAGTGATTCGGCT Gene BVT0102_075725 + 0 NULL GK000010.2:58340849-58351195 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014204 1 XLOC_008258 Coding TCONS_00014204 XLOC_008258 Coding Coding BCL2L10 10:58335645-58345093 j TSS10325 5451 1 TCONS_00014204_3 230 0.426343790130251 4 0.423414840690166 0.00114895206832424 0.00101193044443527 0.0006969110456578 0.000834708179108409 0.000787071074652999 0.000127284499490952 0.000667823755473589 0.000847103404532266 0.00108437337071596 1.85444494727067e-05 9.73152314294964e-07 5.29845349004591e-06 9.97229126123693e-05 6.69823522611253e-05 0.000163405539246428 0 1.79618707077871e-42 0 0.00263602659813358 0.00180590161674491 0.00063946792443905 1.73521534736219e-40 2.83078224427834e-05 2.2490192549333e-24 0.00183348836017926 0.00135150906947949 0.000745424828602305 1.30496130530766e-13 7.680541892236e-14 1.22838249911609e-06 XM_601350.3 BCL2L10 PREDICTED: Bos taurus BCL2-like 10 (apoptosis facilitator) (BCL2L10), mRNA. 0.0 1384 99.87 0.141075032104201 XM_005264083.1 CCT4 PREDICTED: Homo sapiens chaperonin containing TCP1, subunit 4 (delta) (CCT4), transcript variant X1, mRNA. 0.0 704 73.04 0.198679141441937 TCONS_00014204_3 sp|Q9HD36|B2L10_HUMAN B2L10_HUMAN Bcl-2-like protein 10; 1e-50 167 51.41 0.726086956521739 1 coding 0 0 0 0 -0.158035778252097 0.186744419147605 -0.0219645758309564 0.695365242978149 GTGGAGTAATGAGGGATTGGCTAGTAAAAAGTGGAGAATTTTAAGTAATATAAGGATGTAGCTATAAGAAACAGCCAAAAGCTGAATAATTCTATTATAGCCACAGTTTAACTGTGCTGGGATTGGCCGTTTCTTTGTCCCATCACTTAGACTGTAGGGTCCTTAAGACCACATGCCGTGTTCTCCATTGTATCTCCAGTGCTAAGGGGGAGACCTAGCACCCCAAAGGCTAGGAGTAAATGAGTGAATGAATGAATGCACGAAAGTAGATAATATTGGTACTCTAGTAGCAACATGCAGGAGAATTATCCTGTTTCCTGTCCCGTATGGCCAGATTCCAACACACACCTGGATGCTTCCATCCAATCGGAGAAAATGCTGATAATACTTTCAAGGGAGTCACCAGTGGAGGGCTGTGTGTAGCCTTTGTCAACCTCTCCCTGGAGTTCTGCGCCCGGGAGCCGGGCACTCCAGCTCCTGCGCCGTCCACGCCTGAGGCTGCCGTGCTGCGCCACGTGGCCGCACGTATCCAGGAAGCAAATCGAAACGTCTTGCCCCTATACCGCCGCTGCCGCAGGCACCGCGTCGAGCTGGTGGCCAGGATGGCGCAGAGGCTACTCGACGAAGACCCTGGCCCCAGCTGGGGCCGCGTGGCCTCACTCGTAACCTTCGCGGGGTCGCTGCTGGAGAGGCCACCGCAGACGACCCGACGGCAGGAGAAGAGAGACGACGACGGCGTTAGCAGGGACTGTCGGCTCCTGGTGGCCCTTCTGTGTGCTCAGTTCTGCGAAAGGCACCGCGCCTGGCTGATGACTAACGGCGGCTGGGATGGATTTTGTCTCTTCTTCAGCCACTCATTCCAGCCATCTTGGGAAAGACAGCTGGTCTGGTTTTTCCTCTCATACTGGACAGCAATAATCATAATCTACTTCTGGATAAAATTATCAGCCAACATGGACCCAGCCAAGCTTGTCAGCAGCCAGGGGAATAACATCTGTGTGGATAAAAAGCCAGCCTAGATCTGCTTCAGCGATGTCTTCATAGATGAAGCTGTTGCTGATGCTGTTAGAACAAGACTTCGACCAAAAGGAATGGATAAAATGGTTCAAGATGGGAGAGGTAATGAGACCATTACAAACGGTGCTTCCATTCTGAAACAAACACGAATGTTATATCCAGCCGCCAGAATGCTGGGAGCTACGGCTCAAGAGAACCAGGGAAGTGGCGCCACATCAGCGGTCGTTGTTTCTGGCTCATACTCTCTCTCCAATTGCTAAAACAACTTTTTTCAGAAATGGATTTATTATTTCTGAGTCATCCTTGAAGGATTTGGAAAAGGGTATTAAAGTCTTGACGTGCCTTGACCTGTGGAACCAAGTGACAGAGGAAAGTTGTTAGCAGTGCAACCGCTTCGTTGAACTCAACCATTGTCTCTCAGTATCAAGTGTAAATGCAGGGAGGAGAGCAACAGACCCACCACAGCTGCTGGCGTAGATCTTAGAGATGTCAGAAGCGCTAAGAAACCTGCTAATCCCCTCGAGGGTGTAATGCTAAGTGAAATAAATCAGACAGACAGACAAATATCGTGTGATCTCTCTTACAGATGGAATCTAAAAAATAATAAAGAACCAAGCTTATAGATAGAATAAGTTGGTGGTTGCCGGAGGTAGGGGGTGGAGGGTGAGAGAAATAGGTAAACTGTCATTTTAAAAAAGAGGCGGGGGCGGGGGGAAAACTTGCTGGGACTGTTCATTGTGAGTTGGTGCAAGGGCCGGTTCTCAACCAAAATGTGGCCAATTCTGACATAAGCAGAATTGAAAAGCCTAAGATTGGGCTTAAAAGCAAATCAGGATAATCAGTGTCTGTTGTGCCCAGATGGACCAAGCCCTGAGGGAAGACAGTCTATGTTCTAAGTGAAGCAAATTTTAAAGATGGATAGAAGTCTCTTCTTAAGACATGATTGTAGTGATCTTAAATTAAGTTTCCTGATCAAAATGAACATTGCAGTAGTTAAGGATATTGAAAGAAACTGGAACCAAGCCACTTGCTCATACTGACCAACTTACTGCTGACATGCTGGGTTTGGGTGAGTGAGCCGAGGGGATCAGTTTACATGATCCTGGCAAACTGCTCCAGGTTACAGGCTGTATAAGCCTAGGAAAAGGTTCCGGTTGTGGTTCCTGGTCCTAACAAACCAGTGCTTGAAGAAGCTGAGCCCTTGATTCATGATGCCCTATGTGTGATTCGTTTTTGAGTGAAGCAGAGAGTTCTTCTTGCAGGAGGGCGTGCTCCAGAAATAGTGGGCCCCATGGTTAACTGGATATGCATGAACGTTGAGTGGTATGAGATCCTACTGCGTTTGTGCCTTTACAGATGTTGAGGCGGTCATTTCATCTACGCTAGCTAAAACTGCTGGGCTGAATCCCATCCCTACAGTAACAGAACAAAAAACAAGCGAAAAACTGGTGTGCCCAAGGAGAAAACGGTAGGCATTAGTGTCCAAAAGGGTGGTATTTCCAGGGCTTTGGAGGAACTGATGGTTCAGCCTTTGTTGGCTTCAGTCAGTGTACTGATACTAGCAACTGAAACTGTCTGGAGCATCCTGCACCTTGATGATGTAAATGCTCAGTGATCTGGATGGTGCTGGCTGGCCCCGTCACGGCCACTGACAGTGTGGCTGGAGTGGACCGCTGCCTTGGTGTCCCTTCTTGTTTGTGAGATTGTTTCCTCTTTACATTCCTGGGCTTGGTCTTCCACTTGGCATTTGCTTGAAATTGTCTTGACACAATGAAAATATTAACTAATTGGTTATAAAATTAAAAAACTGCAGTGTCCCCCCAGGCCTTCCTGGCCATTACTTTACTTGCATTTTACAAACAATTGGACCTGCTTTGTTGCCTCATCTTATGAGCCTTTTCTCTTCAGAACATGCAGTTCTGCTTTCTGTTCTGACTTGTTCAGTATGGCAGGATAAGCTGATTTAACTTTCCATTGCCTTGTGTTTTAGGGTGTTTCTCCCTTTATGGGCTATTGGAAACAATATTGCATGGATTTTGTATATGTGCATAGCCCTGCATTATTATGTCTACAGAAAATAATTCTAGAAAAAGATTGAGTCACAGTTGATGTGTATTAAAATTTAGCTGCTGCCAAATTACTTTTCAAAAGAGGTTCTACCAATCCAAACTTACACCAGGTCAGGGAATGCTTAGCTCTTCACACTCCTGCCAGTGTTAAATCATCCTAAGCTTTTGCCTGTATAGCTTGTGATATCTGTCACCTTTAGGAAAGTCATTCTTGTCCCAGGACTACAAAGAAAGTATTTTATGTCCTTGGTCATTGATCCATTCTGGAATCCTTTTTAATGTAGTATGTGATAGGGAAGAACAAATCTGACTCCATGCTTGATCTGTTCCTTTTACTAACATTTGTGCTTTGTTGCCAATGCTTAGTCATGCTGCCTCTGCACTTCTTGTAAAAGGGTGTTGCCTACTGTCTGAAATATACAGGATAGCCTATTCTCAGGGCTCTGACTTTTAAGAGTCTATTCATATATAGATAAAAAGTTGCAAGACAGAGAATAATATCTATCTTGTTGGAGGTTTACAGGACCATCATGACCTGACCTATGTGGGAAGCTGCAAGAACAAAGGCTTCCCACACCAAGAAGTTTGCAACAACTAACCTAGCCCCTCCCTCACCTTGCCTTCAAAAGTGCTTTGATGAAACTCTGAGAAGTTCCAGGCTTGAGGATAGGAGCCACCTGTCTCCTTGTAGAGCTCTGCAATAAGTCTTTCTGTGCTCCACACTCTGTCATTTCGATTTGTCTGGCTTCACTGTGTGTGGGGCACTTGAACTTGCATTTGGTAGCAGCATGAAGTAGGACATAGTCCTTCCAAAAGAAGAGTTGGGGTAGTATTTCAGCCTTGTTTATAGATGGTCCATTTTTTCCTAGCTAATTTGAATGTATTATCTAGTTTGTAGACTTATCTTTTTCTTTACTAACAGCGCTGTCTCAATTACTATGTGTTTATAGCATATTTGAACATCTGGTTTTATAGTTTAATCTCCTCCACCATTCTTCTTTAAAAAAAAATCTTTGGCTATTTTTGTGAATTAAGATAAATTCTAAAAACCAGTTAATAAAGAATCCACTAAGACTTCTCTTTAGGATTTTGAATAGAATGGGATTAGATTATAAATCAATTTGGAAATAAGTAATATGTTTACAATATTGCATTTTCCCTTCTAAGAACATGAACTTCTGTTCCATTTATTTAGGTCTTTTACAGTTTTCTTCACATAGGTCCTGTGTTCTTGCCAGACGTATTCCAGCTCTTTGACTTACATCACCATTGGGAATAGAATGTGGAGAGAATGTTTTGCCTTCCCACAGAGAAGAGGTCACAGAACAGAGGTCAGAGATTGGGGGCGGGATGGAGTGTGGAGAAATAGTTTTGATGACATGACTGAAATCGCATAATTTGAGTGTGCCTAAAGCTACTTGGGGCTTGATAAATTTCCTTTTTGGCTTAAACTGATTTTTTTCTAATTTTTTTAACTTTTTATTTCTTTTTGGCGTTTACTTGATAAACAATGTTGTGTTAGTCTCAGATGTACAGCAAAGTGATTCGGCTAGCATAAATATGTGTCTATTCTTCAAATTCTTTTCCCATCTAGCTTATTAAATATTATTGAGCAGAGTTCCTTATTATTGAGCAGTAGGTCCTTATTGTTTATTGATTTTATATATAGTAATATGTGTATGTTAATCACAAACTCCCTAACTATCCTTCCCATCCCCCCTACCCCCCACGGCCCACACCCTCACCCATTCCCCTCCGGTAACCAAAAGCTTGTTCTCTAAGACTGTGAATCTGTTTCTGTTTTGTAAATTCATTTGTGTCATTTTTTAGATTCCCCATATAAGCGACATTACATATTTGTCTTTGTCTGACTTCACTCAGTATGACAATCTGTAGGTCCGTCACTGTTGCTGCAGATGGCATTGTTTCATTCTTTTTTTAAAGATTTTTTAAAAAGTGAATCCTTTTTAAAGTATTTATTGAATTTGTTACAATATTGCTTCTGTTTTATGTTTTAGTTTTTTGGCCTCAAGGCGTATGGGGTCTTAGCTCCCTGACTAGGGATTGAACTTTGACCTCCTGCATTTGAAGGCAAAATCGTAACCACTGGACCACCAGAGAAGTCACTATTCCATTCTTTCTAATGGCTGAGTAATATTCCGTGGAATATATGTGCCACATAGTCTATCCATTCTTCTGTCAGTGGACGTTTAGGGTGCTTCCATGTTTGGGCTATTTTAAACAGTGCTGCAGTGAACACTGGGGTGCATGTGTCCTTTCAGATCATGTTTTTCTCCAGATGTGTGCCCATGAATGGGATTGCAGAATCGTACAGCAACTGTTTTTAGTTTTTTAAGCATAATTT EMBV3_05923 AGAGCGGAGGTTGGGATCCAGCGAGAGGGATGCTGAGGATGTGAAAAAACAGCCTTTCTT Gene GeneID:509080|PKN1:NM_001080246:16_cdna Constitutive 0 NULL GeneID:509080 7 GENE PKN1 MGC142408 protein kinase N1 EMBV3_07280 GGCGTTCAAGCCTTCTTAGACACCAGAAACTCCACAAGAGAAGGGAATCATGTCCAGTGT Gene GeneID:100336990|LOC100336990:XM_002699563:66_cdna Constitutive 0 NULL GeneID:100336990 X GENE LOC100336990 NULL zinc finger protein 75D-like EMBV3_24568 GTTAACCAGTTCCTAATAACCAAATCCATAGCCAGCGCAGAAATCCTCCCGGAACCTGGG Gene GeneID:768320|DEFB7:NM_001102362:5_cdna Constitutive 0 NULL GeneID:768320 27 GENE DEFB7 DEFB8 MGC133630 bnbd8 defb404 defensin beta 7 EMBV3_35182 CCAGCCCCTCACACCCAACCAGATTGTTTCTACCCTCTTCACCTCCAACTTCATTGGCAT Gene GeneID:614624|ALG3:NM_001083511:58_cdna Constitutive 0 NULL GeneID:614624 1 GENE ALG3 MGC142824 asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae) EMBV3_34339 TTCATCCCGACGTTATCACCAAGTTCGAGCTGACTATGCCCTGCTCCTGCGTGGAAATCA Gene GeneID:788792|FARSB:NM_001105021:205_cdna Constitutive 0 NULL GeneID:788792 2 GENE FARSB MGC179291 phenylalanyl-tRNA synthetase, beta subunit EMBV3_10176 GGTCCCCAAGGAGAGGAGGGTCTGGAATTCCCAAGGAGGAAGAAAGGACAAACTTTTCTT Gene BVV0102_064704 + 0 NULL GK000028.2:20405412-21867758 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251625 TCONS_00246740 TCONS_00175509 TCONS_00118457 TCONS_00118459 TCONS_00220566 TCONS_00166913 TCONS_00118040 TCONS_00238581 TCONS_00118490 TCONS_00059696 TCONS_00204210 TCONS_00165977 TCONS_00219592 TCONS_00118456 TCONS_00040258 TCONS_00111186 TCONS_00145751 TCONS_00233473 TCONS_00241019 TCONS_00123823 TCONS_00087729 TCONS_00242064 TCONS_00118491 TCONS_00162767 TCONS_00115210 TCONS_00251851 TCONS_00080713 TCONS_00118488 TCONS_00072261 TCONS_00055707 TCONS_00087730 TCONS_00241565 TCONS_00170890 TCONS_00204211 TCONS_00205125 TCONS_00059695 TCONS_00161822 TCONS_00228562 TCONS_00056149 TCONS_00118487 TCONS_00125692 TCONS_00027918 TCONS_00118489 TCONS_00002600 TCONS_00229794 TCONS_00031759 TCONS_00009619 TCONS_00007850 TCONS_00246741 TCONS_00170891 40 XLOC_154566 XLOC_151107 XLOC_105290 XLOC_072622 XLOC_133883 XLOC_101749 XLOC_072206 XLOC_145248 XLOC_072644 XLOC_036486 XLOC_124371 XLOC_100817 XLOC_132911 XLOC_024074 XLOC_067086 XLOC_088920 XLOC_142955 XLOC_147683 XLOC_075375 XLOC_052579 XLOC_148728 XLOC_099648 XLOC_069472 XLOC_154792 XLOC_049597 XLOC_044030 XLOC_033515 XLOC_148229 XLOC_103679 XLOC_124587 XLOC_098707 XLOC_138526 XLOC_033952 XLOC_077234 XLOC_015372 XLOC_000643 XLOC_139288 XLOC_018004 XLOC_005172 XLOC_003410 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_31868 TTGGAAGAATCTCGGAGTCTGGCAGTCCAGCTGGTGATGCGGTACTGGGAGCCCGTGCCC Variant GeneID:511167|NRM:NM_001037596:90_cdna 330^526 1 EMBV3_19779 GeneID:511167 23 GENE NRM MGC134557 nurim (nuclear envelope membrane protein) EMBV3_03019 ACAAAGGCAACCTTCCCAGGTCTGACATAGCCCCAGCCTCAGGGCTGGCCTGATGGGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40363 GAAATCATGCGGGAGGATGAAGCTGTGAAGACATTCTAAGAGCCGCCCTGGAGTTGGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29247 TATGGATGCTACTCGAGCCTACCCATTGCTTCTCAAGGTCTAGTCCCTTCTGTGCTGTTC Gene GeneID:508945|C12H13ORF26:NM_001098913:64_cdna Constitutive 0 NULL GeneID:508945 12 GENE C12H13ORF26 MGC165726 chromosome 13 open reading frame 26 ortholog EMBV3_09244 ATCAAGTGGTTGTACAGCATCAAACAGGCCAGGGAGTCGCAGAAGGTGTCCCACGTGTAA Gene GeneID:767946|FAM110B:NM_001077018:11_cdna Constitutive 0 NULL GeneID:767946 14 GENE FAM110B MGC128948 family with sequence similarity 110, member B EMBV3_23612 CTCCCTTCTCTAAGTTTCTAGTAATAATGCCAGGCCCAAGTCTTCCCAGGGTCTGTGGGG Gene GeneID:512581|F2RL2:NM_001038533:233_cdna UTR3_Alt 1 NULL GeneID:512581 10 GENE F2RL2 NULL coagulation factor II (thrombin) receptor-like 2 EMBV3_20637 CTGGGGCAAACGTAAATGTTACGATTCTGTGATTGTATTTATCAGTGAGTGTTTAAAGTG Gene GeneID:100124511|LOC100124511:NM_001102550:2_cdna Constitutive 2 NULL GeneID:100124511 7 GENE LOC100124511 MGC143377 hypothetical protein LOC100124511 EMBV3_18852 TGACTGAGCCTTCGGTTTCGCCCAGCAAGCGCCGCACCGCGCCAGCTCAGTGAAGAATTT Variant GeneID:533577|LOC533577:XM_002689652:44_cdna 323^519 1 EMBV3_24937 GeneID:533577 8 GENE LOC533577 NULL similar to Chromosome 9 open reading frame 40 EMBV3_00834 ACCCAGCACTGATTGGGGACAAGGGCTGAACTGCTGGCCACCAGCCACACCTAGGAAGGA Gene BVV0102_011786 + 0 NULL GK000022.2:16949785-16958693 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128151 TCONS_00128153 TCONS_00128150 TCONS_00128154 1 XLOC_077840 Coding TCONS_00128153 XLOC_077840 Coding Coding ARPC4 22:16957287-16967915 = TSS95698 2372 1 TCONS_00128153_1 168 0.143760539629005 6 0.777359555848311 0.00437250517237932 0.00254602002415611 0.00415438320759349 0.00136195401844211 0.00149362810391196 0.00068103471370354 0.000393096997201498 0.00186417904484086 0.001905103745534 2.69383186628003e-09 1.05748050109517e-09 4.25107827553699e-08 9.9963153479028e-07 2.91449391185199e-10 4.02679896940277e-08 0.00666868954223163 0.000718610432953528 0.00751418690169292 2.22890075831597e-07 4.40783927035815e-08 1.59674075027501e-07 0.000231264095722224 0.000990333515814461 0.00130066752802171 2.28077665621538e-12 0.00128216178488923 0.000205152107727994 4.0569193350273e-07 0.000582267094610712 1.33994909638407e-13 NM_001076163.1 ARPC4 Bos taurus actin related protein 2/3 complex, subunit 4, 20kDa (ARPC4), mRNA. 0.0 1588 99.66 0.374789207419899 NM_005718.4 ARPC4 Homo sapiens actin related protein 2/3 complex, subunit 4, 20kDa (ARPC4), transcript variant 1, mRNA. 0.0 1849 87.08 0.637015177065767 TCONS_00128153_1 sp|Q148J6|ARPC4_BOVIN ARPC4_BOVIN Actin-related protein 2/3 complex subunit 4; 3e-120 341 100.00 0.994047619047619 1 coding 1 0 1 1 -0.108468629629205 0.443439204725228 -0.0322779593141579 0.633618404408422 GGGCGGACACTGCGGCTGCGCTTCTGGAGAAAGGGCAGGCGTCGCGGGGCTGGCCACTTCCGCACTTCCGCTTTCCGGCCCAGCCAGCGCCCGCGATGACTGCCACTCTCCGCCCCTACCTGAGTGCCGTGCGGGCCACACTGCAGGCTGCCCTCTGCCTGGAGAATTTCTCCTCCCAGGTCGTGGAACGACACAACAAGCCGGAAGTAGAAGTCAGGAGTAGCAAAGAGCTCCTGCTACAACCCGTGACCATCAGCAGGAATGAAAAGGAAAAGGTTCTGATTGAAGGCTCCATCAACTCTGTCAGGGTCAGCATTGCTGTGAAACAGGCTGATGAAATCGAGAAGATTCTATGTCACAAGTTCATGCGCTTCATGATGATGCGAGCAGAGAACTTCTTTATCCTCCGAAGGAAACCAGTGGAGGGGTATGACATCAGCTTTCTGATCACCAACTTCCACACAGAACAGATGTATAAGCACAAGTTGGTGGACTTTGTGATCCACTTCATGGAGGAAATTGACAAAGAAATCAGTGAGATGAAGCTGTCTGTCAATGCCCGTGCACGCATTGTGGCTGAGGAGTTCCTTAAGAATTTTTAAACCACCTGGCTGGATCTCGTGGCCTTCCCCCTCAGGATCCCCCGTGTCTCTGTGAAGTCGTCCTGGAGTTAACTTCCCAGAGCAGTGCAGCGACGGCAGCGGCAGCAGCAGCGGAGGGGAGCTGGGTCAGGGTGGGCATTAGATGCGGGAGGGGGGTGGTGTGCTTGCTCGCTGGGCCACAAAGCAGCAGTGGACCTGCCCCGAGGCCACATGTGCCTGGTCAGGCTGGCTTCTGTTGTTCAGTCCCCTGGGCCGGGACAGATTTTTTTTTTTAATGTCTTGAAACTTAAAACTCTGTGCTTGTAGGAGACTGTAACCTTTTTGTCTTTTTTTTTTTTTTTAAAAAAAACAATCTCCACCTCCAGTGGCTGTGACTGGTCCCAGTGATTGTACCTTACTGGTCGCTGTGGGTCTGGGCGGGCCTGGAGCCAAAAGGCGACTACTGTTCCTCCCCGGAGCCATTCCAGGTGGGGAGGGAGGGGGGTTTCAGACTTGTGTTCCTCTCCCTCGTCCTCCTGTCTCCTTAGGCTCAGTAGAAGCGGTGGGGACCCTCTACCAGCTTCCTGAGCCCTGCCTGCAGTTGGCCACCCAGCACTGATTGGGGACAAGGGCTGAACTGCTGGCCACCAGCCACACCTAGGAAGGAGCTGGGGCCTAGAAGCTAGGCAGCCTTCGGCCTCAGGGGCCGCTTCGTGCCCTCCCAGCTGGGAGGGGTCGCTGTTTCGCCTTGTCTGTCAGTGCAGTGCCTGTGCTAGAGGTGGAGAGGTGAGTCCTCCAGAGCATCCCTGCCAGGACCTCCTGCCTGCTCTGGCTCCTCTGCTTCCCCGCTCGCTGTACCTTTTCTTACTCTGGTGGGTCCTCCCTCCCCCAATTAAAGTCTCTTTTTGCCCCTCTGGGGCTGCATGAGGTCTGTGCTCTGTGTGTATATGTGATGAAAGGAGGTGGAGCTGTTCCTTAAGACCATGTGGCAGGCACTTGGGCCTGGGGGTCCCCACCAGAGACAGCCTTGTGATTGGCCTCTGACAGTAGCCCTGCTGGAAGGCCCTAATCCGAGAGACCCATTACAGTCCAGGCTGCACCCATTTCTGAAACTGCTCTCTACCTGTATAGAGTTTTGACCCTTTTCACATAGTGAGCTCATGTGGGCTAGAATGTAACAGAGAAATAATCCCATTTCATGGCTAAGAAACCTGAGGTATCATGAGATACAGCAGCTTGCCCCAAATCTCCCAGCTAGTGAGCAAGAGGGTGGAATTCAGATGTAAGACATCTGCCTCTACCTGTGCTGTGATACTGATCACTAGCCACATGTGGCTATTTAAATTATTACAGTTAAAATTTAAAATTGATTGCCTCAGTCCCACCAGTGCTCAACACTTACATGGCTGCTAATGCTTACCACATCACACGGTCGTAGATAAAACATTTCCATCATTGCAGAAAATTCTGTTGGACAGGATTAAAGCCTCTTACACCTTGGAGTAAAAAAAAAACCAAAAACTTATGTTTGAGTCCTATTCTTAAGAATTTGAGCAAGTTATTTATATTCTGTGCCTCAGTTTCTTAAATCTGTAAAGTGGAGATAATGTCAGTCTGACACAGTACCTGCCATTACAAGTAGTGAATAAACAATGACTGATCTTTCCACCAGCCCAGTATCCAAGCTGTTGGTAACTTCCATTGTGCTGGTTGTGGGGGGTGACATCCCTGTTTCAGACTTGGGGGCCAGTGGAAGTGTTGCATATGTAAATAAAGAGGTGCATTGAAGTG EMBV3_33685 TTGCCAAAGAAGGCCGATCCGTAAAGAAGGACGTGTGTCCGCTCACCAAGAAGGTTTTGA Gene BVT0102_311383 + 1 EMBV3_09208 GK000015.2:76987499-77157185 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35784 AGCCCCTCGCAGGAGAGGGCGCTGGCCCAGCACATGAAGTTCCGGAAGCAACAAGATCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32682 TTCCTGTGTGTGTATGTTGTTAATCCAACAATTCTTCCTTCTCCCCACTGGCCTGTCCCC Gene GeneID:534923|AKT2:XM_002694989:182_cdna Constitutive 1 NULL GeneID:534923 18 GENE AKT2 NULL v-akt murine thymoma viral oncogene homolog 2 EMBV3_10922 ACAGAGATCTTATGTAAAAGCATTTCCCCCACCTGCCCAAGGGAATATTTATTGCAGACG Gene GeneID:781091|SHISA3:XM_002688218:112_cdna Constitutive 0 NULL GeneID:781091 6 GENE SHISA3 NULL shisa homolog 3 (Xenopus laevis) EMBV3_14014 ATGTAGGCCAGCACCCCACGACTCGAGCCAAAATCTCTTAAACCACCCGTGAAGACTGGA Gene BVV0102_335545 + 1 EMBV3_15075 GK000004.2:69396222-69401000 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06616 GACGCCACTTTCCGGAGCGCACAGCAAGTGAAATCAGGTATTATGATGAACTGTGCACAA Variant GeneID:534212|NCEH1:NM_001123034:31_cdna 219^447 3 EMBV3_02458 GeneID:534212 1 GENE NCEH1 AADACL1 neutral cholesterol ester hydrolase 1 EMBV3_22640 CCAAGGGTCAAAATTCAAAGACCGTCGGCTACAAATATCATGGCACAAGGCCAAGGTGCC Gene GeneID:516521|RBM27:XM_002689299:149_cdna Constitutive 0 NULL GeneID:516521 7 GENE RBM27 NULL RNA binding motif protein 27 EMBV3_07841 GGTTTCAAAGCCATTGTGCAAGTTTAGTGTTGAAATCTACTAGTGTTGGAGGGTCTCCTC Gene GeneID:512464|SLC11A2:NM_001046121:65_cdna Constitutive 0 NULL GeneID:512464 5 GENE SLC11A2 MGC138014 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 EMBV3_41089 GCACGTGACATCAGTTTCATATGTGATCAGTGACCTTAGCGCTGGTGAAGGATGCCAAGG Gene GeneID:782234|LOC782234:XM_002687758:75_cdna Constitutive 0 NULL GeneID:782234 5 GENE LOC782234 NULL hypothetical LOC782234 EMBV3_39383 ATCAACAATGAAATCGACGAGACAATCAGACATTTGGAGGAAGCCGTGGAGCACGTGTGC Gene GeneID:404149|CASK:NM_001102481:19_cdna Constitutive 0 NULL GeneID:404149 X GENE CASK MGC139144 calcium/calmodulin-dependent serine protein kinase (MAGUK family) EMBV3_30118 GGAGTCGCATCCTCAAGGCCGGGGGCAAGATCCTCGTAAGGGCCGAGAGGTGTACAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07502 CGGCTGATCCAGGGTATTCGAAGGAGAGACGGCGTAGGCGAAGATCAGGAAACAATTGCT Gene BVV0102_310397 - 1 EMBV3_17292 GK000009.2:50515679-50574573 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241430 TCONS_00204180 TCONS_00138407 TCONS_00132405 TCONS_00201377 TCONS_00138406 TCONS_00254827 TCONS_00018727 TCONS_00199818 TCONS_00148378 TCONS_00206254 TCONS_00184696 TCONS_00196654 TCONS_00220133 TCONS_00184697 TCONS_00251614 TCONS_00060246 TCONS_00056822 TCONS_00046799 TCONS_00156816 TCONS_00206255 TCONS_00160954 TCONS_00233185 TCONS_00137160 TCONS_00057018 TCONS_00166135 TCONS_00122090 TCONS_00057884 TCONS_00035886 TCONS_00203551 TCONS_00190111 TCONS_00184695 TCONS_00058348 TCONS_00197074 TCONS_00153262 TCONS_00087961 TCONS_00062828 TCONS_00208783 TCONS_00143669 TCONS_00060247 TCONS_00254911 37 XLOC_148094 XLOC_124364 XLOC_084615 XLOC_080770 XLOC_123023 XLOC_084614 XLOC_157759 XLOC_009409 XLOC_121470 XLOC_090260 XLOC_124865 XLOC_111408 XLOC_118400 XLOC_133450 XLOC_154555 XLOC_036632 XLOC_034625 XLOC_026938 XLOC_095276 XLOC_097847 XLOC_142667 XLOC_083370 XLOC_034820 XLOC_100973 XLOC_073646 XLOC_035681 XLOC_021016 XLOC_124202 XLOC_116146 XLOC_036077 XLOC_118739 XLOC_093026 XLOC_052749 XLOC_037555 XLOC_127295 XLOC_088090 XLOC_157843 Coding TCONS_00196654 XLOC_118400 Coding Coding PNPLA3 5:114959864-115014122 = TSS146286 8151 1 TCONS_00196654_3 531 0.568151147098516 13 0.850010136940856 5.89876291415044e-05 3.15153418752854e-05 3.29130043297627e-05 2.59624223173378e-05 2.20213274024594e-05 1.4496162216887e-06 9.48251118053323e-05 5.15896206190356e-06 5.54760148107161e-05 0.000235938474950753 0.00019441326777349 8.9349876479414e-05 7.67343864975346e-06 3.61392880773479e-05 3.63228777626609e-05 0.00744770511677906 0.00251913245768283 0.00257607319979578 4.42586817272491e-06 1.86109887723752e-05 3.89347427037933e-06 0.00220176912508276 0.00197643567127696 0.00261654031494228 1.4581504266532e-05 3.01650521480806e-05 2.37076584200379e-05 0.000388194564081781 0.000566336010450564 0.00064585302379113 XM_002687974.3 PNPLA3 PREDICTED: Bos taurus patatin-like phospholipase domain containing 3 (PNPLA3), mRNA. 0.0 3041 100.00 0.206723101459944 XM_005261754.1 PNPLA3 PREDICTED: Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), transcript variant X1, mRNA. 0.0 686 73.55 0.133480554533186 TCONS_00196654_3 sp|Q9NST1|PLPL3_HUMAN PLPL3_HUMAN Patatin-like phospholipase domain-containing protein 3; 2e-148 439 57.81 0.704331450094162 1 coding 0 0 1 1 -0.0266304558446969 0.849327696487349 0.0012879508776763 0.980163879338 ATGGCTGGCACCAAGGTGGGCTTGGCTGAAGGCTGTGGGGACTGGAGCCAGCTAGGGTGGCAATTGGAGGTGGAGTCATCGCTTCACAAGCCAGACCCTCCTGTTGTGAACATCAGCCTGAGGGAAGTGGTCACCTCCAGCACGGACCTGTCCTCACGTTGCTGCTCCACCCTCTGCCTTGTCCCGGAGGAGCTTGCCCTGCCATGGGGCTGGCACCTGATGTTCCAGAGCAAGGCTGGGCCTGCGCTGGGCACTGGGGACAAGATGTCCCAGCTCTGGAGCCTCGCCTCCTGGATGACATTTGGGGCCCGTGGGAGCCCCTCCACGCCCGAACCTGGGAACAGCCACTTGCATTACATCGCTTCAGGCACCTGGCCCTTCGGGAGAGACATGCTGATCGACTTCAGCGGTATTCTGCTCCATCTCATTGCTGTCATCGTACTCAACAACTGCCTCCAGCATGACCAGACGTTGCAGATCCTCATGGACCTCACCCGGAGCGCCAGAAGCCAGAAATTCGGGATCGTCCACCCAGGCTTCAGTTTGAGCAAGCACATCCGAGACGGTCTCCAGAGACACCTCCCTGACAACGTCCACCAGCTTGTCTCGGGCAAGATGGTCATCTCGCTTACCAGAGTGTCGGACGGAAAAAACGTGCTGGTGTCGGATTTTCATTCCAAAGACGAAGTCGTGGACGCCTTGTGTTGTTCCTCCTACGTCCCTTTCATCTGTGGCTGGATCCCCCCTTCCTTCAGAGGCGTGCGATATGTGGATGGAGGAATAAGTGATAACATACCCTTTGTTGATACCAAAAGGACCATCACTGTGTCCCCCTTCTATGGGGAGAGCGACATCTGCCCCAAAGTCAAGTCCACGTTCTTTCTTAACGAAGGATTCACCAAGCTCAATATGCAGTTCTGCACAGAGAACCTCTACCTGATGTTCCAGTCGCTGTTCCCACCAGATGTCAAGGTGCTTGGAGAGCTATGCCTTCAAGGATATGTGGACGCGCTCAGGTTCTTGGAGAAGAATGGCATCCGTGATGGGCCCCATCCGTGCCTGAGCGCGCCCCCCGCAGAGTCGGAGCCCAGGAGCCTGGAGCCTTTTCTGGGTGTGGCCCCCAGGGAGGCGGGGCCCAAGCCAGTGGAGCTGCTGGACCACTTGCATCTCAGCATGCTGACCTGGGACGAGAGCGTCCTGGAGACCCAGTCGCCCGAGCTCAGCATGGCACTGAGGAAGGCAGTCAGAAACCCAGATGGGTACAGAAACAGGATTTGCAACTTCTTACCAGTTAAGATCATGTCCTACGTGATGCTGCCCTGTACGCTGCCCGTGGAGTCTGCCATCGCTGTGGTCCAGAGACTGGTGACGTGGCTTCCAGACATGCCCAGCGACATCCAGTGGCTGTGGTCGGCCACCTCCCACGTGTGTTCTCAAGCCATGGTGCGTCTGCTCCCCGCTTCCAGATCCCAAATCCCAGCAAGCAGCCAACGGCCTTCCTCCACAAACCCGGACACTGTGGGCGTCGCTGGGCTCTCTGCTCCTCCGAGGACCTGGACACGCACCCTGTGGATGTCCTGCAGAGGCCAGAGCTGACAACTATGATGTCCGCAGAATGACCTGTGTGCTGAGTTTGTAGTGTCCTGAAACCAAAGGCAATCTTTCTAACAAAAAGCTAGGAAGCTACTCTTGGTGTGCGCGGTGGGTGCAGAGCTCAAGCATATCCAGGATATGAGTCTCTAAATATCGTTGGCTCGGTTGGGAAACTGCACAAGGGAGCCCGGCGTGGGGGCATCTGTGGCTGACTCCTCACCCTCTCAGCTGCCCCAGGGCACGTTCCTAGGGTGACTGGTGTTTGGATCAGGGACGTTGTGGCGGGGAGCTGGGCTGCCCTTTGTGCAGTCACAGTGGTTGGGGGGAAGGACTGTGGTCCCATCTCTCCATAGAGAAAGCAGCCAGTGTCGGGGAGGTGGGGTGCCATCCTCCCAAGGACACCCCTGGTTTCAGGGGGCATTCCGAGGTGGTAACTTACGTGAACTCTGGTACATCTTTCTGCTGCTGCTACTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACTAGGCTCTTCTGTCCCTGGATTCTCCAGGCAAGAATACTGGAATGTGCCGGGGTCCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACAGCGTAGGCGAAGATCAGGAAACAACTGCTTAATTAAACGTTAATTAAGGATATAAGGAGTAATAGAATAAGGATAGTTCAGTAGGAAATTCAGTGAAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTGAGAGAAAGAACGACATGGGGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAATAGTTTTTATACCTTAAGTTATGGATAATGGGGGAAGGGGTGGAGTCATGCAAGGACAGCAGCTCCTGGTCCTAAATGAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAAAAACTTATTTTTCTCTAAAGGTGATTGGTCAGGAGCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGTCACAGGAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTGTAACTACTCAAAAGAATCTGTGTTTAGACAGTTTAGAACATCTCCTGCCTCTCACAGTTGGGAGGCTTTGAACAATCACATGTGGCCAGAAAAACCTATTCAGGCAGGCTAGAGGATTTCCAAAGGAGTTTGTAGCTTAAACACTGTCACACCCAGGAATTATTAACTGGAGCTGCAAGCCAACTCCTCTCCCAGAGAGGTAGTGGGGGACAGCCCCCCGCAAAGTCAGAGGTGCAGGTGAAGGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATGGGGGACTCCTGAGGCTCAATCCCGCCTTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCATGGGCGGAGTTCCTCACGCTGGCTCCTGGCAGTGATAGAATTCCAGTTGAGCTATTCCAGATCCTGAAAGATGATGCTGTGGAAAGTGCTGCACTCAATATGCAATATGCCGGCTCCCGGCAGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAATCAGTCGTGCCCGACTCTTAGCGACCTCATGGACTGCAGCCTACCAGGATCCTCTGTCCATGGGATTTTCCAGGCAATAGTACTTACCTATCCTAAATATTTGGTGGAGTTATATTAAACATAACTCTCAGCAGGCACTGAGAGAGAGCATCAGAGGGCAGACAGATGGAAACCACAATCACAGACAACAGGCCAATCTGATCAAACGGACCACCCAAGACGGACGGGTCATGGTGGAGAGGTCTGACGGAATGTGGACGACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCTTGAACAGCATGAAAAGCCAAAAAGATAGGACACTGAAAGATGAACCCCCCAGGTTGGTAGGTCGCTGATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAAATGAAGTGATGGGGCCAAAGCAAAAACACCACCCAGTTGTGGATGGGACTGGTGACAGAAGCAAGGTCCGATGCTGGAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAGGAGATGACAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTCAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATAGCTTGGTAATCCAAGCCTATGTCCCAACCAGTAACAGTGAAGAAGCTGAAGTCGAACAATTCTATGAAGACCTACAAGACCTTCTAGAACTAACACCCCAAAATGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGCCAAAAGCTAATAGAGTTCTGCTAAGAGAACACACTGGTCATAGCAAACACTCTCTTCCAACAACACAAGAGAAGATTCTACACATAGACATCACCAGATGGTCAACACTGAAATCAGATTGATTCTATTCTTTGAAGCCAAAGATGGAGAAGGTATATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTCAAGAAAGTGGAGAAAACCATTCAGATATGACCTAAATCAAATCCCTTATGACTATACAGTGGAAGTGAGAAATAGATTTAAGGGACTAGATGTGATAGAGTGCCTGATGAACTATGGACGCAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATACAAAAAAGCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAACTGAAGTGAAAAGCAGAGGAGAAAAGGAAAGATATAAGCATCTGAATGCAGAGTTCCAAAGAATAGCACAGAGAGATAAGAAAACCTTCCTCAGAGATCATGCAAAGAAATAGAGGAAAACGATAGAATGGGAAAGACGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAATCTTCATGACCCAGATAATCACGATGGTGTGATCACTGACCTATAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTACGAACAAAGCTAGTGGAGGTGATAGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACCCAATATGCCAGCAAATTTGGAACACTCAGCAGTGGCCACAGGACTGGAAAGGTTCAGTTTTCACTCCAATCCCAAAGAAGAGCAATGCAAAGAATGCTCAAGCAAACCACACAGTTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCATGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAATATTCACTGGATCATGGAAAAAGCAAGAGAATTCCAGAAAAACATCTATTTCTGCTTTCTTGACTACGCCAAAGCCATTGACTGTGTGGATCACAATCAACTGTGGAAAATTCTGGAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCCGTATGCAGTTCAGGAAGCAATAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTACTTATTTAACTTATATGCAGAATACATCATGAAAAACGCTGGGCTGGAGGAAGCACAAGGTGGAATCAAGATTGCCAGGAGAAATATCAATAACTTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGGTCCCATCACTTCATTGCAAATACATGGGGAAATAGTGACTGACTTTATTCTTCTGGGCTTCAAAATCACTGCAGAATGGTGACTGCAGCCACCATCTGAAATTAAAAGATGAAATTCAAAGGTGCATACTCCTCGGAAGGAAAGTTATAACCAACCTAGACAGGATATTATAAAGCACAGAGACATTACTTTGCCAACAGAGGTTCATCTAGTCAAGACTATGGTTTTTCCAGTGGTCATGTGTGGATGTGAGAGTTAGAATATAAAGAATGCTGAGCACAGAAGAATTGATGCTTTTGAACTGTCCTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATCTATCCAGTCCATCCTAAAGGAGATCAGTCCTGAATTTTCATTGTAAGGACTAATGTTGAAGCTGAAACTCCCAATACTTTGGCCACCTGATGTGAAGAGTTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAAAAGTGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTAATTGACAGAGGCCTACATGCTACAGTTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTTATATTAAACAAAGGATTCTTAAAATCTCTTGAATTATCTATTATGAGGATCAAGAAAACATTCAGAGAATAAGTCTTGAAAATAGAAATCCAGTGCATAAGACAGTCACCCTGGCACCTGCCCCCGCACCCCTCCCCCGCGAGCTCTAATGGAGACGAGCAGGAGGCAGGCACGCACCGTCTCTCCAGGGTGGTAATCTGTTGGCAGGCACAGATTACATGGGCCCACTGCCCGTGTAATATGACCCAAGGAGCAATGTGGCGTGCGTTTTGCTTATTTATGCATTTGAGGATACCAAAAAGGAAAGGAACAATCAGCTCAAATCCTACTTCTGGGCGTGCAAAGTCACAGCTCTCACCCACATCGTGTAGGTGTCCTGGAGCCGAAGAACCAGCAGGGCCAGACAGAGCACCGCACCGTGAGGGCAGCAGGCAGGGACTGCCTGTGAAAACACAGGGTCGGCTCGCAGTGCAGGGAAGTGCCCCATGGGGGCTCCTGGCTGGCTCCTCACATTTCTGGGGTCTCCTGTGCTGGTAACCCTCACTTCCCGAGTGAGGCAAGGCTGAGTGGTGGGCTCTCTGGCCACCTGGGCCCCAGGTCAAAGCACTGTCCCCTTGCTGAGCTGACCTGGACTCCTGGTGACACCCTCACACCTTCCCTGAGCCCGGTGCTCGGGGTCCCAGTGGCCTTCTCTGCCAGAACCATCGCCCGGGTCTTAACACATGCAACCCCACCTTAGCAGCATCTTACAGTAACCAAGACACTTTCATTTATATAGTATTCTCTGCACTGGTTCTGACGTCATCGTAGGGAAAAAGATGTGTTAAGATAGGATTACATGGGACTTATTTTCTTACTGTCTGTGATTATTCCATCTTCTTACGATCAGCATGTGTTTTATTAATTCGTTTCAAACGTGCAGTAACACGAGGAAGTGTATTACTGTTTCTTAGGAATATCCCGGGTTCCGCCTCACTGGTGCCTTGTCTCCTCATTGGCTGACCCAGGCCTCCCCCCGACATCCTCACCGCCCCCCAGGCCCTCACCTCTCCAGCACTGCGGGTTTCTCATCAGCGTGTAAAACATTCTCAAGTTTCTCCCACCTTGTCAAATATTGATGATCCGCTCGGTATGCGGGGATGCTCCAGTATCAGGAATCATTGGTGTGCAGTGTGATTCATGCCAGGGAGCAACCGTCTGTTTGGTAAACAGATAGCAGAGCCTGCTGAGAAGCATGAGCCCAGTCTTGCTAAGGAAATAAAATGTGTGTGTAGAGTGGACACTGAAAGACTGTTTGCCCGGTTACCGACGGTGGTTACCATGATGCCGTCCCCTGTAATTACATTTTATATTAAATTTCTGCGTTCATCACGATATAATTCATAACAA EMBV3_04651 AACACGAGTTTGCAACGGGACCGGTTTGTCTGGACGACGAGAACGAGTTCCCTCCTATCA Gene GeneID:528410|WIPI1:NM_001099040:22_cdna Constitutive 0 NULL GeneID:528410 19 GENE WIPI1 MGC159964 WD repeat domain, phosphoinositide interacting 1 EMBV3_13448 AAATCAGTACTTTTTAATGAAAACAACTTGACCAAAAATCTGTCACAGAATTTGAGACCC Gene GeneID:282220|EEF1A1:NM_174535:33_cdna Constitutive 1 NULL GeneID:282220 9 GENE EEF1A1 MGC126913 eukaryotic translation elongation factor 1 alpha 1 EMBV3_40111 CTGCCCAGATCCCCCCATTCACCCCAACCTTATGCTTCTATTTCGACTCTGTTATAAAGT Gene GeneID:534876|PAQR3:XM_002688378:13_cdna UTR3_Alt 2 NULL GeneID:534876 6 GENE PAQR3 NULL progestin and adipoQ receptor family member III EMBV3_07621 ACTTGTACAGCCGAAGGTACTTCCTGACCATCCCCTACGAAGAGTGCAAGTGGAGGAGAA Gene GeneID:780788|ITGB1BP3:NM_001079643:78_cdna Constitutive 1 NULL GeneID:780788 7 GENE ITGB1BP3 MGC128315 integrin beta 1 binding protein 3 EMBV3_36410 ATATCTCCCATCCCTGCTTGAGCCCTCTCCATGAGACCCTTGTGCCTCTCTGTGAAGACA Gene BVT0102_207918 - 1 EMBV3_28181 GK000019.2:37985161-37985584 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093629 TCONS_00096672 TCONS_00093627 TCONS_00093628 2 XLOC_057198 XLOC_058029 Coding TCONS_00093628 XLOC_057198 Coding Coding PHOSPHO1 19:37978509-37985670 j TSS70179 2323 2 TCONS_00093628_2 249 3 0.675977653631285 6.55051458744806e-08 2.54624192766748e-09 8.73156939434705e-05 0 1.94110987024806e-45 2.16765257827515e-13 2.42906691938009e-05 1.02991887245906e-10 1.82467381624541e-09 0.000906564120418622 7.96060068305074e-06 3.77910898957977e-05 1.55498578788844e-24 0 6.20373601529862e-21 0.000379578726813652 3.49530381862614e-08 0.00299606179959803 1.76125899665483e-09 4.75462857576319e-15 3.32551199909006e-10 0.00195079590542079 0.00299847511071281 0.00490017055171949 8.01279324652767e-09 2.91649856966181e-05 0.000588253470512868 0.00237015070258286 0.00176512310995805 9.96430051897478e-08 NM_001193119.1 PHOSPHO1 Bos taurus phosphatase, orphan 1 (PHOSPHO1), mRNA. 0.0 2807 100.00 0.669393026259148 XM_005257107.1 PHOSPHO1 PREDICTED: Homo sapiens phosphatase, orphan 1 (PHOSPHO1), 0.0 1478 80.34 0.707705553164012 TCONS_00093628_2 sp|Q8TCT1|PHOP1_HUMAN PHOP1_HUMAN Phosphoethanolamine/phosphocholine phosphatase; 5e-174 485 92.37 0.995983935742972 2 coding 1 1 1 1 0.0354412042516176 0.788346315406266 -0.0220292313810743 0.745511275748605 TTTAAAGGGGACGCGGCGGCGGCCTGGGGGGATGGGGGGCAAGTGGAGGGGACGGCCCAGACGCATATCATCCACGGCCCCTCCGGACTGGAGGGACTCGTGAGAGCCGAAGCCCAGAAATCCGGGGGTGGATAAGACACCGCATCCCCTCCAATTCCCCCTGCTGGAAAAGCTCAGAGGTCCTGTCCCCCTTTCCTCTGAGGGACTGTATTTGGTGACCACAAGAGGATTCAATCACTCAGGAGAAAGTTTCCAGAGGACGGCGGGATGGCTGCGCAGGGCTCGCCGCGCTTCCTCCTGACCTTCGACTTTGATGAGACTATCGTGGACGAAAACAGCGACGACTCGATCGTGCGCGCAGCGCCGGGCCAGCGGCTCCCGGAAAGCCTGCGTGCCACCTACCGCGAGGGCTTCTACAACGAGTACATGCAGCGCGTCTTCCAGTACCTGGGCGACCAGGGCGTGCGGCCGCGAGACCTGCGCGCCGTCTACGAGTCCATCCCGCTGTCGCCCGGCATGGGCGAGCTGCTGCAGTTTGTGGCCAAGCAGGGTTCCTGCTTTGAGGTTATTCTCATTTCAGACGCCAACACCTTTGGCGTGGAGAGCGCGCTGCGCGCCGCCGGCCACCAAGGCCTGTTCCGCCGCATCTTCAGCAACCCTTCCGGGCCCGACGCTCGGGGGCTGCTGGCGCTGCGGCCCTTCCACTCACACAGCTGCGCGCGCTGCCCCGCCAACATGTGCAAGCACAAGGTGCTCAGCGACTACCTGCGCGAGCGGGCCCACGACGGCGTGCACTTCGAGCGCCTTTTCTACGTGGGCGACGGCGCCAACGACTTCTGTCCCGTGGGGCTGCTGGCCGGCGGCGATGTGGCCTTCCCTCGCCGCGGCTACCCCATGCACCGCCTTATCCAGGAGGCACAGAAGGCTGAGCCCAGCTCCTTCCGCGCCAGCGTGGTACCCTGGGAAAATGCCATCGAAGTGCGCCTCCATCTGCAACAGGTGCTGAAGACGTGCTGAGGACGCGGCCTGCAGGGGGCGCCTGGCGGGAAGGGGGCCAGGGGGCTGGGGACAGGGAAAGACAAACCTAGTTTTATTATTCCCTTTCCCTTTCGTTTTGATGGGTCCCTCCGGGAATTTCCGGAATCCGGAGCTCGTCCATTTGGGGGCTGGAGGAGAGAGTTCGGAGCTGTCCCCATCTATGCAGTTAACCCAGCTTGGCTGTCTCCCCCAGTTCCGCTGCAAGCGAATTCTGGAGTTTGGCCCCGCCAGGGTGGTGCGCAGACCCACGCAGGCAGCAGTGTTTTCCAAAAACCTTGCCCCCTCCCAACTGGGAGGAAAGGGTTGCCTGGCAGGGTAGAGAAGGAACATCTCCCACTGTGTTTCATTAACTGTTGCCTTGGGCCGCATGACTTCCTTCCCCTAGACTTCTGTCAGGGGTACACAGGTCCTGAAATTCCTCCCCCCGTCCCTTCAGCCCTGGACTCCCCGCGGAGAGATGGTGCTCTCCACGGACGCCATTCTCAGGCCTAGGTCTTGCTTTATCTTCTGTGACCCTACACTACACTCCTGCCTCCCCCCACGCACGCTGTCAGCGTTCCCACAGGAAGAAATGCCAGAGGGAACAATCGCCTCCTGGTGGTGGGATGAGGTAGCACACTGTCCAGGGCTCGGGTCCGGCCAGCCAGGGACCTCAGAGAACGCGACGACGTCTCCTCCTCGCACCCCAGCCTCTTCTATGCAGCAAGAAACCAGGGACTTAACCAAAGTCGCCCCGCCGACTGGACTCTCTGAACCCCTCCCCTCCCGTATGGAACAGAAAGCCATGATGTTTTAAAGCAGGGCCACTGAAACCCAACCCCCTCCTCTTTTGGTGTTTCAGAGCTATAAAGGAGGTAAAGGGGCAGAGGTGACTGAGATCTCTCGCGCCGCAGTCTGAGGGATGAGGATGAGATGATCTCTCAGAAAGCCCCACTTAAGTGAGGGAGCTGGACCCCACTCTTGGAGGAATGTCCAGTTTGGGGAACCAAGTGAATTCATAAAGCAAGGAACAGGCAAAAGAGCAGGGTGCAGCCTGTCTTCACAGAGAGGCACAAGGGTCTCATGGAGAGGGCTCAAGCAGGGATGGGAGATATTCCTGCTTAGGGCAGGCAAAGGGACTCAGTCAGCAGGAGCCTAAAAACCGGGTTACCTTTCAATCTTTCAGCACACCCCGCACCCCACCCTGCAGGGCAATCATCAAGAGGTCACCAGTTTTATTCCAAGTTGGCACTTGCAGCTGGAGACCCTGTCTTGCATGGTCCAAGGGTCTCCTGTGGATAAGATC EMBV3_22302 AGGAATTCAGCCTGCTCAAGTTGCAGACAACTTGCCTTTCTGGGTGAAGGAAAAGGCCAA Variant GeneID:511533|SPATS1:XM_002697259:478_cdna 469^814 2 EMBV3_27311 GeneID:511533 23 GENE SPATS1 NULL spermatogenesis associated, serine-rich 1 EMBV3_16416 GTTAGGTGGTGAGGTCCTTAGCTGAGCATCACTTACACAGGTCTGGCCATGTTATTAGCC Gene BVT0102_163778 + 0 NULL GK000011.2:103489545-103515899 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30803 CCCTCCTTGGCATCCCCGGGCAGCTTGGTGCAGTGCCGTTTATTTGTACAGAAACATTTT Gene GeneID:525110|CHERP:NM_001109798:83_cdna Constitutive 0 NULL GeneID:525110 7 GENE CHERP MGC165938 calcium homeostasis endoplasmic reticulum protein EMBV3_32254 TTGCCATCCCAAGCCCAGTGACCTTACTCCGTATACCGTGCCACTCTCCAGCAACTTTTT Gene GeneID:521962|MLLT3:XM_002689544:13_cdna UTR3_Alt 2 NULL GeneID:521962 8 GENE MLLT3 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 EMBV3_01955 TTTCTCTTCACGAGCCCACCGAGCAACACATCCATGGTGAAGGGCCGATGCGAACATCTT Gene BVV0102_250336 + 0 NULL GK000009.2:76776875-76937940 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235996 1 XLOC_144352 NonCoding TCONS_00235996 XLOC_144352 NonCoding NonCoding - 9:76888260-76889888 - TSS176742 641 1 TCONS_00235996_1 56 0.246489859594384 2 0.607252612169637 0 0 0 6.47750121004427e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000156619349485689 0.000347791509048575 0 0 0 0 3.24265840724486e-05 0 0 0 0 0 0 noncoding 0 0 0 0 -0.30692151058382 0.164332925804895 0.00957682454959806 0.900958645205794 ATGTGAATAAAGCCTAAACTGGAGCATAGAAGATTTTCCAATGCCATTTGGTGTGGATGTGGTAAATAGTTTAGGAAACTAGAAAGGTGTTTGAAAGGTAAATAATTAAACCAAAGAAAATAGAATCAGAGACAGTTAAAATCAAGACTACCCAGATTTCTAATCTCGTCTAGACTGACTTTCTCTTCACGAGCCCACCGAGCAACACATCCATGGTGAAGGGCCGATGCGAACATCTTCAGAAAGGGAGTAAACCGATCTCGACGCCTACGGCTGGCGGAGAGTAGGACAGAGGACAATGATGCCGTGTAAGCCCGGTTTCCAGCCACTCCTGTGAATGACTCATCTTAGCGCCCTGTGTGGATACACGCTGCCCAGGATCATCAACTTGAGTTTGTTTTTCTCTTGTTCATCTGTCTTTTGTTGTCTGATTTGCAAGGCTCTAGCCGGAGAACCTAATACTGGTCGTGTGTTCCTCCCTTATACAGCTGACTACAGAGAAAATTAGGCTCCTGAAATGTAACCAATACAATTCTTAGAGAAATTCAATGAAGACTGTCACACTACAAAATGATATGCTAAAATATACCACAAGATATGAGCTTTAGTGATGCTTTCATTACGTTATACAGAACAGAAAG TCONS_00237780 TCONS_00237777 TCONS_00237778 TCONS_00237779 r 3' 48053 TCONS_00237780 TCONS_00237777 TCONS_00237778 TCONS_00237779 r 3' 49680 EMBV3_27227 AGGAAGCTCATGAGTGGAACCAGAAAAGAGGTATTTCAGACCGAACAAAAGAATCTTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21947 CTTTTAACTACATCCCTTGCTCAGTGGCCCCAAACTCCTTTACCTCCACGTAGCTTGAGA Gene BVT0102_115723 + 0 NULL GK000014.2:59710795-59969093 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00057001 1 XLOC_034803 NonCoding TCONS_00057001 XLOC_034803 NonCoding NonCoding - 14:59729783-59731016 - TSS42678 1233 2 TCONS_00057001_3 92 0.822384428223844 1 0 6.62076402438997e-05 2.44487236906718e-05 2.25158983415734e-05 0.000168372506779187 0 8.70327025708129e-06 0 0 0.000108785381202864 0 0 0 0 0 0 0.000235626486720574 0.000242369127385392 0 5.81583353456942e-05 0 0 5.41655334990306e-05 0.000143848250792458 0.000203949217042344 0.000132051341114818 8.85682617279517e-05 1.90077467489417e-05 0 0 0 NM_001244318.1 MAGT1 Bos taurus magnesium transporter 1 (MAGT1), mRNA. 1e-70 271 92.15 0.154095701540957 0 noncoding 0 0 0 0 -1.14146892776653 0.0334158111628962 -0.0614844975462671 0.274122376063775 GAAAAACAGAAGTTTATTCATATTTGCATTATGAATGTACACATGGGTGCGCCTAACAAGTAACTCAGAGGAGTAATTAGAATTTGGGCTTATCTCAAGCTACGTGGAGGTAAAGGAGTTTGGGGCCACTGAGCAAGGGATGTAGTTAAAAGAATGTGACCAAGGAAGGTGTAGTAAACACGAATTGTTTAAGTAAAGTTTGTCATGCGTTTATAAGAAGTGCTTTCTCCATTGATAATGAGGCCAAAAAACTTGGCCTCTGTGCACCCAGGGCTGAATCAAGTCTCAGAGACAGAGTGCAGGGTGAAGTAGCAAAGAATAGTGTTATTGCTATTTTGATTATTTATTGCTAGTAAAGTGTCTGCCTACAATGCAGGAGACCTGGGTTCAATCCCTGGCTCAGGAAGATCTCTTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAAAATCCCAAGGACAGAGGAACCAGGTTAGGCTACAGTCCATGGGGTCGCAGAGAGTTGGAGATGACTGAGCGACTTCACTCATTCATTGCTAATTTTATTGCTATATTTATTCCAGACCAAGGGACACAACAGGCTCATGCTCCTGGAAACTGTGTCCCAGCCTGGGAGGATCTGGTGTAGAGTTTTATAGCAATGGTTCAAGGGCAGGATCACTGATAAGATTGTGGTATGTGTGAGGCTAATCACTTGGTGAGCATCTTTGGTTTCTTTAATCTGGCCTTAGGTGGTCTTCTCTGGAATGAAGAATTCTGACATTTTCCATTTGTCAGGAGGCTTTTAGTTCTGTAAAGATGCCATGATATTGTTATGTTTATTCCTTGAGGTAGAACCAAGACCCTGCCCCCAAGGCTGTATTGTCTTGCCTCAAGACTCCTCTCTTGTCTCTGTATCCTCTCCCTTCTCTGATGGGCAACTGTTTGAATCTGCCCTTTGGAACTCAGGGAAGATCAGGGAGGCTAGAGTCTTTTGCCTACACGCAAGAAATGGGAGACCCGGGAAAGCTCGCGTGCCCAGGAGACAACAGGGTCCTGCTTGGTTTCACTCTCCCCTTTTCTTTGATACTCCTCAATCATGAGGAGAACAGAAGTTACATAAGGAAAGGAATAATCATTTTGGGCAGAGACATTAATCATGAACTCAGTTTTAGGGGGACTTGGTTTTAATCCCCACTTAGGTTTTATCTTTCCCTAAATCTTTCAGGAAATAAGCAATAACCAG TCONS_00052039 . 5' 243370 TCONS_00052039 . 5' 243370 EMBV3_08238 TCCAGGCAGCCGATGCCACCATTAAAAAACTGGAAGACTTCATGAGCACCATGGAGGCAA Gene GeneID:100336865|LOC100336865:XM_002699394:403_cdna Constitutive 0 NULL GeneID:100336865 29 GENE LOC100336865 NULL spectrin, beta, non-erythrocytic 2-like EMBV3_27574 GCTTTTGTAGTAGGGGTTATATTATAATTTAATGTATATAGTGTTGCAGATGGTAAGTCC Gene GeneID:541283|IFRD1:NM_001034729:75_cdna Constitutive 0 NULL GeneID:541283 4 GENE IFRD1 MGC127247 interferon-related developmental regulator 1 EMBV3_39251 CAGCTGAGATGTTCCGGTCCCGGTCTGCCCCTCTATACTCTGCATAACAGCAACAATGAT Gene GeneID:100337357|LOC100337357:XM_002685377:301_cdna Constitutive 0 NULL GeneID:100337357 2 GENE LOC100337357 NULL dipeptidyl peptidase 4-like EMBV3_13095 CAAAGCCCACAGTGTGACAGCTTTACAATCATCTTTTGAACGGTGTCTGCATTGGTTTCC Gene BVV0102_170425 + 0 NULL GK000004.2:68122870-68444034 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181878 TCONS_00184378 TCONS_00184377 TCONS_00181881 TCONS_00181879 TCONS_00184380 TCONS_00181880 TCONS_00184376 TCONS_00184375 TCONS_00181882 TCONS_00184379 2 XLOC_110714 XLOC_111333 Coding TCONS_00184380 XLOC_111333 NonCoding NonCoding - 4:68232945-68238515 - TSS137318 3250 3 TCONS_00184380_1 62 0.366461538461539 3 0.416950978631711 0.001101604803605 0.000412778859925045 0.000482348131985583 0.000239805656795021 0.000542835240896271 9.27942738171451e-05 0.000240576377339276 7.83695062886706e-05 0.000256189614352373 2.09743556576115e-10 2.07327405089371e-10 1.07967726657104e-16 3.66808783374332e-25 0.000115958596734911 8.55138237540735e-06 0 0 0 0.000272339140693581 0.00085581032560799 0.00063316003044845 0 0 0 0.000224006025834201 0.000367343793039765 0.000259672489814101 0 1.09518108537926e-22 4.59640769337595e-18 XM_005205782.1 GIMAP7 PREDICTED: Bos taurus GTPase, IMAP family member 7 (GIMAP7), 3e-39 168 73.83 0.0864615384615385 NM_014660.3 PHF14 Homo sapiens PHD finger protein 14 (PHF14), transcript variant 2, 2e-10 73.4 86.96 0.02 0 noncoding CAAATTATATTTTATTCAGGGAGTTAACTGAGTACTACAGCCTGGGAAACAGGCTCTCAGATAGCCCCGAGATACTGTTCCAAAGAGGTAAGGGAGGATCCAGAATATACAGAAGTTTCTGTTGAAAACAAATAAACGTCTATTTGAACATCAAAAGAGTACAGCTCATCACAAAAAAAGACATCTTGAGTTAATGATTTTAGTGCTTTTCTATGTATGAAACGATGCAAAAAGTCTGAGCCCATTGAAATTATTCCTTAGATATGCATCTTAACTGTCTAGGGAAAAGCAGATGTCAGGATGCTTCCTCTGCTCAACCCTTAGGGCTTATCAAGTAGGACAAAGCTTGGCTTTCAAAGATCCCAAGCCAATGGCTCCCAAGCTGGAATCACCTGGAAGTTTTAAAACCCTGGTCTCCAGACCACATTCTCAGAAATTTGGATTACTGGCTTGGGTGTGGATGGGCGTCAGTGTTTTTTAAAGGTCTACAGGGGATTCTAATATATAGCCAATAATTCTGAAAGTGGAGTTCAGACCAGCAGCATCAGCATCACCTGGAACTTGTTAAAATGCAAATTTTCACTGCACGTCCCCCAATCCTGCTGCCTCCAATCTGCTCCAATCCACAGAATCAGAAACTGCAAAGGAGGAGCTCAGGAAACTGTTTTAACAAGCCCTCCAGGTGAGTTGGATATATACCAAGGTTTGAGAACTTAGGTTGAAAGCCTGTTCTAGGCTTTCCTTTCTCCTGGTTTAAAAAAGATTGCCCTGTCAAGTGCTATCGACCCTGAAAACGTCTGGTCTGAGGCCAATTACAGCTCTCTAAAGCTGCAGGAGCTGGCAGGATACTGCGCGCAGAGGCCTCGCACAAAACCCTTCAGACCATAGTTCCTGGCATCAAACAGCACCACTCGACACCTCAGCTTGGGGACTGTGTGCAGAAGCTTCTCACAAGATGTTGTGATTCAAGATGGCAGGGGTTTGGAGATACTGCTTTCAGCCTGTCTGTTTTGCGAGAACTCTACCCTCCTTCCCCAGAAGGGGAACTCTAAGAAGCAGCACCAACCACAACCTGTCCTGGAGGGGAGAGTGTGTGTGCTCTTGAGTGTGAGTCCATACCTCTTCATTCTCTGACCAAAAAACAAAACATTCTTTTGCTTCTGAACTGAACTCTGTCTCATTCTATTGGTGCAAGTGACACAGGGCAGGAAGATCTTTATTAGGGTCTGACTTGAAAGGGTAGGTAACATTATCACGTTATTTGCATGAACATTAATAGAATCTACATCACATAATGTTCTAGATAATAGCTCTCAGACTTCCCCAGTGGTTCAGTGGTGAAGACTCTACACTTCCATTACAGGGGGGCACAGGTTCAATCCCTGGTTTGGAACTAAGATCCCACATGCCACGTTGCAAAATGAAAAAAAAAAGAAAAGTCTGTACTCAAAATGACAACTCATTTTCCTATTATCTCCTACTCATCAAAGCCTTTCCTACCGTGCCCTCACCTGAAGATCTTTTAGCCCCTCTTGGCGTGCTCACAGAACTCATTTGCAATAGTACCTAAAACCCCAACTAGCTTTTGTATTTGTCTCCCCATCCCCCATCCCCACAAAGCTATATATTTGTCAAAGGGGTCAACGTCTGATTCAGTTCTGTTCCTTTCTTCTGAGTTACCAAGAAAAGAGGAAACTGAATTTTATGAATCCATGGAAATTGCCTGGCCGTCTGAAAGAAGGAAGGAATGTGGAGAGGCATGGGGAGCAAAGCTGGATAGTTAGGCCTTGAAAACTAAGTAGAAGGATTTACACTTCAGGTGGAAGCAACAGGGAGCTGTGTAGAGTGTGGAGTGAGTGGTGTGGAAGTGCAGGCAGAAAGAGATGCAGACTGGATAGAACGAATCCATGCTCCAACCTGTGAGCCAGCTGCTGCATACAGAGCTGTGTTAGGCGCATGCGTATTAATGCTGAGAAACAGGGTCCCCAAAGAAAACGAAGATGAGATGAGAATGTCTTCTAAGGGCTGAATCAGAGGGAGGAAAAATATCACTCCAAAGCTTCTAGATCAGATAATTAGCAGAAGAATGGAAAAGTTAATTGGAAAAGGGTAGCAATCTGGGGAATACAGAAGCTGGGGAAGGATGTTAGGTTACATTTCATTAGCTGGATTTCTCTTTCTTTGAAGTGTCAATTGGGCACACAGATCTCTTAAGATTTAAATTCTGCTTTTTCCTAGAAATATAACTTAAGGGTGAAATAACCTCATCACTCTTCACATTTTAAAGCATTCTTGTTTTATATGCTATCAATGTGGGTTTTAATTCTCTTTGGAAAATGAATACTTTTCTGGGTCCCATGGGAGCTTTCCTTGTGGCACTTGCACAGACAACCATCTGAGCAGAGTGCTTGTTAGATAGGATGAAATATCGTCTAGCGTTAGCAGGGAGACATCACAGGCCACCCACTGGACACCCTAGGAATGAAGAAGAGGCCAAAGGTCTCATGTCTTTAACTGGCAAAGTACAATTTCAAGATTAACAATGGCAACCCCAGTGTGCATTACTGCTAGTGGAAACAAGCGTATGATATCATAACAGAGGAAGAAAAGGCAGCAAATTTGCTTTCAAAGCCCACAGTGTGACAGCTTTACAATCATCTTTTGAACGGTGTCTGTATTGGTTTCCTATTGCTGCTATAACAGATTACCACAAATTTAGTGGTTTAAAATTACGCTGCCTATCCAAGTATTCCAGCATTATGCTTCCAATGAGAGTTTTCATCCTTACTCTACAGATAACCAGGCATGAACAAGCATTAGGATCTTCATACTAGAAAACAGATAATTTCATTTTAAAAAGAACCTGAACTCTTAGAGTAGTTACCTCTCCTAACCTCAAAAACAAAAGATTAATTGTTCATTTAATAATTATCTCCAGAACATAAGAATGAACATATGTTCTGTTTATTAGCTGCAGTGTGACAAGGAGTTACATTTAGAAATCATTGGAGAGACACAACATATTTAACGCAAACGGAAAAGCAGGACATCAAAACAAGGCCAGTTGAGAAGTATTTTCAGCTTTTTATTTTTCCTACTGAAGTAAATTAAAAGAATTAGTCTGAGTTTCTGTGAAACCCTTTGCCATTGAATGCTGTGATTGATTGAAACACAAATATTGTTGATTTCTTTGTTAAAACTAAAATAATTATGTACGAAAGATTCAAATTGTACCTCTTTTTATCTTCAT TCONS_00184374 s 5' 32045 TCONS_00184374 s 5' 34450 EMBV3_17897 CGAGGACTCCAGCGGCAGCACAGGTGGCAGGCGCAATCCCGGGGAGGCCGGTGTGTGCCC Variant GeneID:528832|DHRS1:NM_001046294:176_cdna 159^333 2 EMBV3_30144 GeneID:528832 10 GENE DHRS1 MGC137104 dehydrogenase/reductase (SDR family) member 1 EMBV3_00774 CATATGTTTCGAGGAAGCAACACAAGGGAGAAAGGATCTGATAATCTTCCTTGGTCATTC Gene BVT0102_140933 + 0 NULL GK000003.2:68073052-68612326 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170208 1 XLOC_103536 NonCoding TCONS_00170208 XLOC_103536 NonCoding NonCoding - 3:68186259-68191962 - TSS127243 559 1 TCONS_00170208_1 60 0.794275491949911 3 0.902490354261663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000850460889845202 0 0 0 0 0 0 0.000508758728858405 0.000929703711153102 0 0 0 0 0 0 XM_005194197.1 OXGR1 PREDICTED: Bos taurus oxoglutarate (alpha-ketoglutarate) receptor 1 (OXGR1), mRNA. 2e-26 123 89.25 0.164579606440072 0 noncoding 0 0 0 0 GCCCATGGGAATTCCCAGGCAAGAATACTGGCGTGGATTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCGGAAATCGAGCCTGCATCTCCTGTATTGACGGGGGAAAGAATGTTGTGGCTGAAGATAGAGAAAAAGTTAGAAATTAAGATCTGTGGCTGGTGCTGCTACTCACTAGAGCTATGACCTCAGGAAGTCATCTAATCTCATCTGTAAAGAAGAAGGCAGTGATTTCTAAGAAACATGAATGACCAAGGAAGATTATCAGATCCTTTCTCCCTTGTGTTGCTTCCTCGAAACATATGTTGAAAATTATTAACAAAAGGACACTCATGAGTAAGTCAAAGGTGGAATGTGCATGTACCGAAAAGTGACATAAAATCAGTTGGGTTAGTTTTGTACAGTGTTTTCATTCTCCTGGAGCAACAAAACACCTATATATGAGCTACTAAATATGAACTGTGTAATTCTGGTGATTTTATCTATCAGTTAAATGCTTTGATATTTGCATTTGAAACAAACATTGCACAATGTAAATATAAATAGTAAAATTCATAA TCONS_00173648 r 5' 113209 TCONS_00173648 r 5' 113209 EMBV3_24495 TCCAACTGCTGGCTGGGAGGGCAACATTGGAGATGACCACACAACCCTTCCAGAAAAGTC Gene BVV0102_003466 - 1 EMBV3_03720 GK000025.2:1048241-1060984 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00564 ACCCTGGAGATGTGGTTGCACAGCTTGAATGGAATTGCTCCAAAGCTGGAATTTTCTACA Variant GeneID:534169|SPATA6:NM_001046371:224_cdna 434^600 1 EMBV3_03722 GeneID:534169 3 GENE SPATA6 MGC127957 spermatogenesis associated 6 EMBV3_00945 AAGTCTCGGAGGTCCCCTGTTGGGGACAGGGAATGAGTGGGGTTTCTTGAAAGAGGGGCT Gene GeneID:511049|GSG1L:XM_002698047:431_cdna Constitutive 0 NULL GeneID:511049 25 GENE GSG1L NULL GSG1-like EMBV3_42166 AATATTCCGATGCTCTTTGTACGGGGAGACGGTGTTGTGCTAGTTGCCCCGCCACTGAGA Gene GeneID:614759|LSM3:NM_001037487:37_cdna Constitutive 0 NULL GeneID:614759 22 GENE LSM3 MGC133527 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_12208 AGGATATATGTCTGGGATGTTGGTGCCCGTAGGGGTTGGGATAGCAGGAGCCTTGTTCAT Gene GeneID:508562|C10H14orf37:NM_001038060:50_cdna Constitutive 0 NULL GeneID:508562 10 GENE C10H14orf37 C14orf37 MGC134370 chromosome 14 open reading frame 37 ortholog EMBV3_10012 AAGCCCAACAAGTACGGCGTCATCTACTCCACGCCATTGTCGGATAAGTTCTTCCAGACG Gene GeneID:100140787|LOC100140787:XM_002684920:51_cdna Constitutive 0 NULL GeneID:100140787 1 GENE LOC100140787 NULL similar to KLF3 protein EMBV3_40113 AGGGAACTGATGCCAGTTACATCTTGATCCGGGACATCCACAGCCTGAGGACAACAGCAT Gene GeneID:532272|ADAMTS13:XM_002691624:297_cdna Constitutive 0 NULL GeneID:532272 11 GENE ADAMTS13 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 13 EMBV3_38886 CACTACTCAGTCCACTGCCGACAAACCTGTTTGAATTCACCCTGCCAATATTAATCCTGG Gene GeneID:518458|SEMA6D:XM_002690938:268_cdna UTR3_Alt 2 NULL GeneID:518458 10 GENE SEMA6D NULL sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D EMBV3_25543 TCACAGTGTTTTATAGAAGCTCTTACTTTTCTTCCAATACCATATATATCATTGCTATTC Gene GeneID:522518|CWF19L2:XM_002692951:46_cdna Constitutive 2 NULL GeneID:522518 15 GENE CWF19L2 NULL CWF19-like 2, cell cycle control (S. pombe) EMBV3_22004 AGGGACCTATTCCGTCACTGTGGGTGCAGATGACTTGACCAAAAAGACTCACATTGTAGC Gene GeneID:504225|AKIP1:NM_001034203:71_cdna Constitutive 0 NULL GeneID:504225 15 GENE AKIP1 MGC128684 protein kinase A-interacting protein 1 EMBV3_23570 GTGATATTGGAAAGACAAGTGCTGGACCAGATCATGTCTATGAAGTGGCCAGGTTTCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24280 CAGCAGCCCGTGAGGCTGTGGACAAAACCTTAAGAAAGGAGACAGATATGTGGTGAGGAA Gene BVV0102_152653 + 0 NULL GK000004.2:95289801-95402318 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41551 TTTTTAAGAAATTACATTTTTGGTTTATAAGTTATGTGTCAACTTACTCCGTTAAGTATA Gene GeneID:510190|TM7SF3:NM_001076827:5_cdna Constitutive 2 NULL GeneID:510190 5 GENE TM7SF3 MGC140686 transmembrane 7 superfamily member 3 EMBV3_03737 GTTCCATTTTGCCCTTTCCCAGGTCCCACTCCAGGCCCAAGTAAACACTTTGTTAGTATG Gene BVV0102_095687 + 0 NULL GK000014.2:2254951-2265677 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052606 TCONS_00052607 1 XLOC_031519 Coding TCONS_00052607 XLOC_031519 Coding Coding ZNF623 14:2263899-2268579 = TSS38993 3804 1 TCONS_00052607_2 507 0.13459516298633 2 0.187433212224834 0.00143350885241704 0.000642457063405201 0.00100125960332957 0.000756410289468791 0.000994366102547942 0.000458494204318061 0.000842536175372065 0.00105523827030776 0.00079770258199736 0.000395873500680866 3.67087177885178e-05 5.82786272780065e-05 0.000221758386990233 0.000442699530278328 8.6622437962597e-05 0.00323578198390121 0.000130931932088838 8.41508594396767e-05 0.00135369195969377 0.00178084428859473 0.000519521710408799 0.00214387986706418 0.000700594856921803 0.000154533177992172 0.00116078196043762 0.00184316826858794 0.00111330782296294 0.000876182080828435 0.000159522932254423 0.000886269184367898 XM_005215274.1 ZNF623 PREDICTED: Bos taurus zinc finger protein 623 (ZNF623), transcript 0.0 6841 100.00 0.996845425867508 NM_014789.3 ZNF623 Homo sapiens zinc finger protein 623 (ZNF623), transcript variant 0.0 1260 78.78 0.390378548895899 TCONS_00052607_2 sp|O75123|ZN623_HUMAN ZN623_HUMAN Zinc finger protein 623; 0.0 822 80.28 0.986193293885602 8 coding 1 0 1 0 -0.0511352853278502 0.691367828655376 0.00358534720345302 0.953731484108819 ATGGACGTTCTGAAGGCAGTGTCTGAAGCCCTCCCAGTGATGGAGCTCACTGCCCCCACGTCTGGGAGGGGCCCTGACCCCAGACTCGGGAGGCTTTTAGGAAACCTGGATGCACAGAGCCTGCGGAGCTGCACCTCACAGGAAGGGGGTTTCCAGCAGGTGACGGTCACCCACTGGAAGATCCAAACGGCAGAGGCAGCACAGGCGGGGAGTAAGTCTGAGGGGAGCCCTCTCCTGAGCCCAGACCTCCTCCTGCTTCAGAGAGAGTTGATCGAGGGGGAGGCCCCCCAGCACGAGGCCTGTGGCAGCTTCCCGTTCAACCCGGTCCTGGCCAGACATCAAGCTTCTCATGCTGGGGAGAAAGCTCACAGGTGTGACGAGTGCGGGAAAGGCTTCAGCCAGAGCTCCCACCTGGTGGAGCATCAGCATGCTCATGGTGGGGAGAGGCTGTACGTGTGTAACGCGTGTGGCAAGGACTTCGTTCTCTACACGGATCTCCTGGAGCATCAGAAAGTACACACGGGAGAAAGGCCCTTCAAGTGCGCTCAGTGTGGGAAGGCATTCTGTCACAGCTCAGACCTGATCCGCCACCAGCGGGTCCACACCCGAGAGAGGCCCTTTGAGTGCAAGGAGTGCGGGAAGGGCTTCAGCCAGAGCTCATTGCTTATCCGGCACCAGAGGATCCACACAGGGGAGCGGCCGTACGAGTGCAACGAGTGCGGCAAGGCCTTCATCCGGAGCTCCAGCCTCATCCGGCACTTCCAGGTCCACACGGAGGTGAGGCAGTACGAGTGCCAGGACTGTGGCAAGGCCTTCCGCCACCGCTCAGACCTCATCGAGCACCAGAGGATCCACACTGGGGAGCGGCCCTTCGAGTGCAACGAGTGCGGCAAGGCCTTCATCCGGAGCTCGAAGCTCATCCAGCACCAGCGCATTCACACCGGGGAGCGGCCATACGTCTGCAACGAGTGTGGGAAGCGCTTCAGCCAGACGTCCAACTTCACGCAGCACCAGAGGATCCACACCGGGGAGAAGCTCTATGAGTGCAACGAGTGTGGGAAGGCCTTCTTCCTGAGTTCCTACCTTATTCGACACCAGAAGATCCACACCGGGGAGAGGGTGTACGAGTGCAAGGAGTGTGGGAAAGCCTTTCTCCAGAAAGCACACCTCACCGAGCACCAGAAGATCCACTCTGGGGACAGGCCCTTCGAGTGCAAGGACTGCGGGAAAGCCTTTATTCAGAGCTCCAAGCTCCTCTTGCACCAGATTATTCACACTGGAGAGAAACCCTACGTGTGCAGTTATTGTGGGAAAGGCTTCATTCAGAGGTCAAACTTCCTTCAGCACCAGAAGATCCACACTGAAGAGAAACTCTACGAGTGTAGTCAGTATGGGAAAGAGTTCACCCCACCCCCAGACTTTAAAAGCAGTCAAGAGGCTCCCCAGGAGGGCCTTCCCTTGAGTCAGACAGCCGTTCACTTCGGGGAGACGTGTGGAGGCCTGGGGGGGCACACAGACTTCTAATTATCCTCTGGCTCACTTAGTGATGCTGGAAACAGTGGCAGGGGCCCTGACTCATGAGGCTTTGGAGGAGTCAGCATTTTCTAGGGTCATGGATGGGCAGGGCTGCCACCTCTCACTTGGTCGCAGTGGGGCCTGCTGTCCTCCGTTGGGAGAACATGCTTGCAGAAGAGCCACACAATTGGACAGCTGACATGGAGCTGGACCAGTTATGGGAGAGCTGTGGGTGTGGGAGGGAGGAGCTTGGCCTCAGGAGGCGAAGATTCTATTCCACTGCACAATAACAATTCACCCTTCAGTTAAATCCCTTTTAAAGCAGAGTTATGTATCTAATTGTATAACTTTAAAAGAGTGTTCCTCAGCCATTTTTGATCTGTCAGAAAGGCAAGCTAGAGAAAGATACTTTCTTACCTAAAACCACAACTTGGTTCTCTGTGGTCCTTAGGAAAAATTCCGAACTCCCCGCCCTGCATCCAAAGGCTTTCTGGAGGTTCATCTGCCCCCAGTTCACTCCAGGTCACAGAGGTAGCACCAACTGCTAGACATGCCCCCTCATCTGGGCGCTCCTGCCTCCCAGCCAAGGACCAAGTTCTCCCTCTCATCTGGCTCATGACCAGTCATGAGTCAAGACCCATCCCAAGCTGCGTGTTGGGCTCAGCCTGCTACCCCTCTGCTGCTTCTGATCCTCGGTAGCCATTTGCCTCTTATTACTGTGCTTGCTCTGATTGTTGTCTGTGCTGTCTCGTTGTTAAGGACTGTGAGTGTATCTCACTGATTTGTGTGTCCCTGGAATCTGGAGGAGGGCAATAAAAAGCACAGCCAAGTGTGCACTTGGCACTTCTCTTGCTTTGTCCTCTCTACACTGTTATTTAAAACATTAAAAAAAAATTTTTTTTTTTTGGTCATTGCTTTTTTGTTTTGTGACAGTGTAGTCTGCTGGTCTACTGGAAATACCTCCTCTTGGCCTTGCTGACGTCTCTGTTCATAATGCCTTCGACACTTGCAGGCAGTAGCCAGAGTGAGACTGGCCTCTTGTATGTTTTGCCTCCAGAGTTTGTCTGTGAATGACTGTCCGCTCACTTGGGGGGCTGCAGGGGGGCGGGGGGCGCTCATCTTCACCTAGTATTCTGTGTATCTCTAATTCACTCAGAGGGCACACAGTCCTGATACACTTCATGACTTTCTTCTGTCCTAATAATTCCATGATTGAGCCCAACTTCTTCCCCCTCTCCCTGTTCTCCAGCTCACTTCGTCACTGATGTGAAAATGTATTGATCAAAGGACCAGTGCTAAATCCTTGGAAACCAGGGTGAATAAGACACCATCTGTCCTGAAGTGATCCATAGTCTGATGGGGCAGGCAAAAAGGTCATGGCAGGCTGAGTTCAGTGTTGGAGTTGAGGTATGTTTCCAATTGTGCAGGGGTGTAGGTCAGGAGGCAGCTAGTTTTGTGTGGAGATGTAAGGCGGCTTCAAGGAGGAGGTGACAGTGAACTGGACAAGTAGACACTTGTCACCTAGAGAAGAGGGTGGTCTGGGAGGGACTCTGGAGAAACAGGAGGCCTGGAGGATCCCTCTCTGATCTACAGCAGGTGAGTTATATCACACAGTGGATAACTGTCTAGCAGAACTGTTAGTTGTTGCATCTGAATTTCTTTTATCGGAACATGAACCGGTTTTGAAATGCTGTCAGAATGTACTGCCCATGAGGGCATATCTTGAGTTCCTGAATTCCAGCAACTCTAGAAGTCTTGAGTGAGTAGCATATAGTACTCCATTGTTGGAAAACTCACCCGTAACAGATGTTTCAAATGGTATAGAAACATATTACCAGACCATTTAAACCAACTTTGGTTGAGGTCTAGTTGCCATATAGTAACACACCCATTTTAAGTGTACAGAATTTTGGCAAATCCATATACATGTGTAACCATCATCACAAGAAAAACAACACTTCTGTCACCCAAAAAATGTTCCATTTTGCCCTTTCCCAGGTCCCACTCCAGGCCCAAGTAAACACTTTGTTAGTATGTATTCATTCTGCCTGTTGCAGGACTTCACATAAATGGATTCATATGGCATGTAATCCTGTGTGTCTGACTTCTTCCACTTTGCCATGTTTTAAAGACTAAACCAAGTAGCTCTGTATTTCCAGAGCTGTTCGTCAGTAGTGTTCCATTGTATGGGTGAAGGTGAACATCATTTATTATTCATCTGTTGGTAGAAATTTGGGTTTCCAGTTTTGGCTGTTATGAATAAAACAGTTATCAGCATTTGTGTAAAAG EMBV3_37628 CCGTGCCCTTTGAGTCAGGGCGGAAACCAGATACTGAAGAGACTAGCAAACAGAAGAAGA Gene BVT0102_363889 - 1 EMBV3_40557 GK000002.2:2740386-3114658 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071418 TCONS_00115686 TCONS_00251707 TCONS_00039226 TCONS_00129783 TCONS_00233372 TCONS_00064812 TCONS_00079609 TCONS_00071186 TCONS_00250720 TCONS_00116100 TCONS_00080603 TCONS_00020157 TCONS_00078719 TCONS_00129573 TCONS_00063486 TCONS_00063080 TCONS_00200574 TCONS_00209711 TCONS_00175855 TCONS_00218945 TCONS_00252107 TCONS_00021595 TCONS_00008224 TCONS_00115865 TCONS_00135686 TCONS_00208745 TCONS_00056146 TCONS_00161097 TCONS_00089437 TCONS_00161835 TCONS_00208264 TCONS_00165934 TCONS_00010053 TCONS_00107179 TCONS_00170823 TCONS_00238307 TCONS_00116665 TCONS_00039951 TCONS_00131137 TCONS_00090421 TCONS_00122313 TCONS_00238933 TCONS_00251907 TCONS_00063181 TCONS_00199037 TCONS_00111497 TCONS_00079498 TCONS_00122282 TCONS_00209636 TCONS_00031910 51 XLOC_043189 XLOC_069855 XLOC_154648 XLOC_023044 XLOC_078496 XLOC_142854 XLOC_039536 XLOC_048494 XLOC_042958 XLOC_153663 XLOC_070269 XLOC_049487 XLOC_010835 XLOC_047607 XLOC_078286 XLOC_038213 XLOC_037807 XLOC_122226 XLOC_128222 XLOC_105634 XLOC_132264 XLOC_155048 XLOC_012268 XLOC_003782 XLOC_070034 XLOC_081909 XLOC_127257 XLOC_033949 XLOC_097989 XLOC_054222 XLOC_098720 XLOC_126777 XLOC_100774 XLOC_005605 XLOC_063090 XLOC_103665 XLOC_144974 XLOC_070831 XLOC_023768 XLOC_079842 XLOC_055202 XLOC_073868 XLOC_145599 XLOC_154848 XLOC_037908 XLOC_120690 XLOC_067397 XLOC_048383 XLOC_073837 XLOC_128147 XLOC_018155 NonCoding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_38230 CTGTTTCATAGCCATCCTGGGGAAGGAAGAAATCTCAGCGCATCTAAGTACCAAGCCACC Gene GeneID:507347|SIRT5:NM_001034295:56_cdna Constitutive 2 NULL GeneID:507347 23 GENE SIRT5 MGC128489 sirtuin (silent mating type information regulation 2 homolog) 5 (S. cerevisiae) EMBV3_40626 TGACCGTACAGAACCCGGACACGGCGCTAGGTTGAACAGTGTTTAAAACGTTTGAAAAAC Variant GeneID:516064|LOC516064:XM_002684772:285_cdna 177^331 2 EMBV3_35668 GeneID:516064 1 GENE LOC516064 NULL similar to Uncharacterized protein C3orf17 EMBV3_34303 TTTGTGGATGAATATGATCCTACGATAGAGAGAACAAATAAAAAGAGTTAAAGACTCTGA Variant GeneID:541140|KRAS:NM_001110001:46_cdna 270^448 3 EMBV3_34029 GeneID:541140 5 GENE KRAS KRAS2 p21ras v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog EMBV3_24922 TTACTGTTTCTCATGGGCTGACGGCTTGAAAGGCAGCGGCACACAAGGGGTGGTCATACA Gene GeneID:100297087|LOC100297087:XM_002694641:35_cdna Constitutive 0 NULL GeneID:100297087 17 GENE LOC100297087 NULL similar to pre-B lymphocyte gene 2 EMBV3_32476 AATCACTTCTACTGTGATGATGTCCCCTTGGTTGCCCTGGCCTGTCATGAAACCCATCAC Gene GeneID:785406|LOC785406:XM_002693669:292_cdna Constitutive 0 NULL GeneID:785406 15 GENE LOC785406 NULL similar to olfactory receptor 1039 EMBV3_07738 GCAATGAGCCTACTCTGGTTAAGGTGTTCTTTTCCTCAAAGGTGCCCTTGTGCCATGATC Gene GeneID:514158|ZDHHC6:NM_001046167:39_cdna Constitutive 1 NULL GeneID:514158 26 GENE ZDHHC6 MGC137792 zinc finger, DHHC-type containing 6 EMBV3_22436 ATCCATTAGATTTTGAGAGTTTTGACCTGCCTGAGGAGCACCAGATTGCCCACCTCCCCT Gene GeneID:510673|PTTG1:XM_002691103:8_cdna Constitutive 0 NULL GeneID:510673 10 GENE PTTG1 NULL pituitary tumor-transforming 1 EMBV3_31486 TCCAACAGAAGCCCCACAACTGGAACTCAAAGCAAATTATGGTCTCGTAGAACCTGTACC Gene GeneID:522319|LOC522319:XM_002693971:188_cdna UTR3_Alt 2 NULL GeneID:522319 16 GENE LOC522319 NULL hypothetical LOC522319 EMBV3_22216 TTTCTGTTCATAAATAAGGGTCCAAGTGCTGAAGACACCGCTCCTCCACAAAGGGGGCCT Gene GeneID:506308|PDXP:NM_001035035:25_cdna Constitutive 0 NULL GeneID:506308 5 GENE PDXP MGC126941 pyridoxal (pyridoxine, vitamin B6) phosphatase EMBV3_08171 GACCATTAAGACTTCATCTTAACAGCTTATGATCCAAGGCGGATGTTCAAAACATGCCTG Gene BVV0102_082392 - 0 NULL GK000013.2:29835885-29840389 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042418 TCONS_00044890 TCONS_00042414 TCONS_00044893 TCONS_00042417 TCONS_00044895 TCONS_00042412 TCONS_00044894 TCONS_00044891 TCONS_00044892 TCONS_00042416 TCONS_00042413 2 XLOC_025662 XLOC_026307 Coding TCONS_00042417 XLOC_025662 Coding Coding SUV39H2 13:29813854-29840488 j TSS31575 6748 1 TCONS_00042417_3 430 0.0976585655008892 6 0.746855404948748 0.000453902981401588 0.000588871400020134 0.000314180766565691 0.000314228151446525 4.10452362227482e-05 0.000185605828027931 0.00084010956678165 0.000471689943042608 0.000199026790740039 7.32750128338745e-16 4.18197876582325e-17 4.66191743758252e-17 0.000180612165435986 1.17334666841519e-16 0.000110333949985191 0.000199709326149563 1.52696163237588e-14 1.91198694908784e-19 0.000448153286959022 0.00209937055642727 1.01832827536857e-05 6.36001437453876e-20 1.42235735968427e-05 3.00297699364468e-21 0.000839284496436764 0.00139051087145648 0.000421398808170372 9.25951117406e-21 9.31779538563222e-20 3.47628281167619e-23 XM_005214229.1 SUV39H2 PREDICTED: Bos taurus suppressor of variegation 3-9 homolog 2 (Drosophila) (SUV39H2), transcript variant X2, mRNA. 0.0 6062 100.00 0.49792531120332 NM_001193424.1 SUV39H2 Homo sapiens suppressor of variegation 3-9 homolog 2 (Drosophila) (SUV39H2), transcript variant 1, mRNA. 0.0 2475 83.49 0.348251333728512 TCONS_00042417_3 sp|Q32PH7|SUV92_BOVIN SUV92_BOVIN Histone-lysine N-methyltransferase SUV39H2; 0.0 839 100.00 0.927906976744186 3 coding 0 0 0 0 -0.173834428937504 0.29102256984094 -0.101932369978084 0.0815380178344377 ACGTTTGCGGTCGGGCTGGTTTTGGAACTGGGAGCAGGAGGATCCCGGTGGTGTGGGTGTGACCTCAGTGTCGGAGGAGCGGAGAGAGGTCGGGGCTGAGAGGTGTGAAGGCTAAGAAAGGAAATGAGTGAGGATGTACCCCGATTCGGACGTACGGGGAGGACCCTTTGGAGGAAGTCCCACTAAGTGGGTACTGGAGGCGTTAGCCTCTGGCTCACGGGAATCGTCATCCCCGCCGGGAGGGAACTTGCGTGCTATTTCTGTGGTCGCCAAAGAATTCGGTGCTGAACGTGTGTTTGTGCGCGCGCTCCAAGACTGGAACTTTCAATGCCTTCTGAATCGGAAAGGTGTTTTCCAGCACTGCGCCTCTCCGCTTGGATTATGGACTCATTATCGCCCAACTTTTCCTCCGCTAGGGCTTGGTGTGTGCCTTGCCTAGTTTCACTTGATACTCTTCAGGAATTATGTAGAAAAGAAAAGCTCACATGTAAATCGATTGGAATCACCAAAAGGAATCTAAACAATTATGAGGTGGAATACTTGTGTGACTACAAGGTAGTAAAGGATATGGAATATTATCTTGTAAAATGGAAAGGATGGCCAGATTCTACAAATACTTGGGAACCTTTGCAAAATCTCAAGTGCCCATTACTACTTCAGCAGTTCTTTAATGACAAGCATAATTATTTATCTCAGGTAAAGAAAGGCAAAGCAATAACTCTAAAAGAAAATCACAGAGCCTTGAAACCTGCTGTTGCTGAATACATTGTAAAGAAGGCTAAACAAAGGATAGCCCTGCAGAGATGGCAGGATGAACTCAACAGAAGGAAGACTCACAAAGGAATGATTTTTGTTGAAAATACTGTGGACTTAGAGGGGCCCCCTTCAGACTTCTACTACATTAATGAATACAAACCAGCTCCTGGAATCAGCTTAGTAAATGAAGCTACCTTTGGTTGTTCATGCACAGATTGCTTCTTTGAAAAATGTTGTCCTGCTGAAGCTGGAGTTCTTTTGGCTTATAATAAAAATCAACAAATTAAAATCCCACCTGGTACCCCCATTTATGAGTGCAACTCAAGATGTCAATGTGGACCCGACTGTCCCAACAGGATCGTACAAAAAGGCACACAGTATTCACTTTGCATCTTTCGAACTAGCAATGGCTGTGGCTGGGGTGTAAAAACCCTTGTGAAGATTAAAAGAATGAGTTTTGTCATGGAATATGTTGGAGAGGTGATCACCAGTGAGGAAGCTGAGAGACGTGGCCAGTTATATGACAACAAAGGAATCACGTATCTCTTTGATCTGGACTATGAATCTGATGAATTCACAGTGGATGCAGCTCGATATGGAAATGTGTCTCATTTTGTGAATCACAGTTGTGACCCAAACCTTCAGGTGTTCAATGTTTTCATTGATAACCTCGATACCCGTCTTCCCCGAATAGCATTATTTTCCACGAGAACTATCAATGCTGGAGAAGAGCTCACTTTTGATTATCAAATGAAAGGTTCTGGAGATGTATCTTCAGATTCTATTGACCACAGCCCAGCCAAAAAGAGGGCCAGAACTGTGTGCAAATGTGGAGCTGTGACTTGCAGAGGTTACCTCAACTGAATTTTCAGGAAATAGAACTTATGACGATTATAGTGTTTTTTCTAATGTTAACATTTTAAAAGTATTTTGGACTCTTTTCATATTATCAAGATTATACACTACGTTGATTTACAATTTACCTTTCAGACTATTGACCAAATGCGTTACTGATCCTTTTGAAGAGAGGAACGTGGGGGTCACATAGACTAATTCTACATATACATATTCAGTGGTTAGATACCAAACATGAAAGGAAAACTGTTTGCAAATCAACAACTATATACTTAACAGGAAGTCTATGTGAATATAGAGAAATGCCTCCTTCAGTGTTTAAGTGTTAAACTGATGATGTAACAGTTGCTAAGATTGAACATTCAATTTGCCATATACCTTGAATTTAGAATTGGACAAATACACAAGTTCTATTTTTGTTATTGTCATTCCTGTTTACCTACTTAACAACTCTTTGTACTTGTATTTGAGACAAATAGGTGATACTGAATTATACTCTATTTTCTACTTTCATTAAAACATTGGTATCTTAATGATATAGAAATTTAAGGTCTAAAATTAAATGTAAAAAAATTTAATTACAGCTTGATTTAATACTTTGAAGCAATCTAGACCAGTAGGAGGAGTGGATATCTGAACCAGTAAAAGATTTTTTAATCTTGTAGAGGAGAGGTATCTGAAGTTTACCTAAAATTCTAGAATGGCTGGCTGATGCACTTCTTAGAAAGGATGGGGCATGGGGCCATGAGGGTCTTTTGGAGCACCAAGCAGGGGAGATGGAGCACTTTATAGGACCCTCTTGATAATATGAATCAGGCGATCTCTGCTGAATACCTCTGGTCTCCACAGTAAAAACAAGATTATCTCTTTAGAGCAGCTGTATGTAATGATAATGTTCCACACAATAATTAACATTGCATCTTCTGAATTTCAGGTAGTTTTAACATTTCCTTGCCACTAAATTTAATAATTTTTATAATTAATAAAGGGCCTGCATGCCTTTCTTAAGACCTGATCTATATTTTGAACAGATACTTATTTTATACGTGAAATTTTTTAATGTGATAAAGCTAAACTTGGCTTGGCCAAAGTGTGTCTGAATTACGAGACCATTTATTACTTGAACTCTGAAGACTGAAGTGACTATATTTATTGTTTGGGGCGAGGGGGTTGTTTGTTTTTTCCTACATAGTGAAACCTAAGTTGGGAAAAAAACTATTTTCATCTCCCTCAGATCCTGGGACATGGTGTCCAACGTGACAGCAACAGCAGCTGAGTCTGGCTGTTGGTATTCCTGACCCGCAGAGCCCTTGGGTAAAACTGAGCTGACTTCAGGGATGCAGCACTTCACATCTTAATCCTTAACTTCTCTTCTTGGGAGAAGCTGCACTTTGTTAATATTGCTGTCACAGGACTTGGCTTTTTCATAGTACAGGGTGAATTGTTTACATGTTTGGAGCTTCGGAGTATATCTGCATACCAAAATTTGGAGGCGTCAAAGAAAAAAATATTTTTTTAGTGCCATTTCTTGATTTAAAAAAAAAGTCACAAGGTGTCAGTGATTTTTTTAAAAAAAGTCACAAATTTACAGCTGCCCCCAGGGGCCAGACTTACTTTGAATTATAATTCTCACAGGTTCAAGCTGTAACATTGGTCAGTGTTTTACTGTCTAGTTATTTGATCTTGTCTACTCTGTGTTAAAGAAATGTAAAGCTGGAGAACAAAGGGAAAAATGACTATTTTCGGTAAACTTGCATTTGGTCCTTATTATAATAGAAATGTAATGAGCTTTTGACATTTTAAATACCCGCATTAACCGTGAGTCGTTAAAAAAGCTGAACTTAAGCAGTAAAATACTAGAAACTAAATGAAGCTGTTAGGAGCTTTAACTATTTTAAGTCAACATCTAGCTACTTGTTTCCTAAGTTGTCAGAATTTCTTCTCTCAATATCAAGCAAATATGCAAGGATAATATTTAGATCAAGTTTACAATATTTAAATCAAGTTAACGCTGTAAATTAATCCACTGTTCATGTTGTATTGATAGCACTGTTTTCAGTATCTACAGAAAAGGATTCTGACACATAGTTGGTAAGCTCAGGGTTTTTTCCCCACATATGCACAAAATCTAGACTGCACTTACTCATAGTTAAGCAGTTTCTCTTAGCAAAATAAATGTAGTTTAGCGTTTGGTTTTCTTTTATTATGCCTTAGCTGTATTTCTGAATATTTTACTGTCATTTTCAGTAAAGCTAAAGGGGCAGAAAATTATTGATGCATTCCTGAGTACCTGTTACTGAGATTAACCAAAGGTTTATACCATTCTTTTAAATATTACTTTTAAGAAAGTTTTTTTATTGTCATGGCTCATGCATTTGAATATTAAAGTACCATTTTGTACTTAGCATAAGGTAGATGGATGCTTAAATTTTTTGAGCATTAGTCACCAAGTACTTAAACAATTTTGCTAAGTTCTGCCTGGAAGTGCAGAGGAATTTTAGAATTAGAGCTGATAACCTTTGAGCAAGTCTTAGGCCCTACGTGTGTCCTCCTGTGCTTCTCATGAGTCGAGGAGGTTGGTGCTGTCTTCCCTAAACACACTGAAGAAATGGGCTTAGACTGCTGTGGTTAACATTAACATCCCCCAATCAGAAACTACACTTGACTGCTTTTAATGTATTTGACCAGCTTCAGGCAGACTTTTTTTTTTTTTTAATCAGTTTCTACTGTTAGTTTAAACAAACTGCAAAGTCCTGGATTCCTAAAGAAATGTGGCTAGCCATGGGTTTCTTTTGTGATAATATAGCTTGGCATTTTTGAAACTTTTTTCACTTATACATCACAGTTCTTGAAGTAAAACTCAAACAGCCAGTGTAATTAATCTTACCCACTTTTATGCTTTTTTTGAGAGGCTTTAGTGCACAGTGGTTAAGAGCATGGCCTGGGGTGCCTGAGTGTCTTGTTTGAGTTCTGGCTTCACATCTTACTAATGAACTAACCCCTCTGCCTTAGCCTTCTCCTTTGTGAATGCAGATGGTAAGTGTGCCTACCTCATAGGGTGGTTGTGAGGAGTAAAAAGTATGTGAAAGAATTAAGCCTTGTTACAAAGGAAGTACCATATATCAGTATTAGCTGTAATTCTGTACTGTAAAATATTTGGTGATCACTGCAGGGTTTTTGATCAAAGTCTGTTGTAGTACTCTTAGCCATTAAATACATTCAGCCAGCATTTATTATGCTAGAATCACATATAAAACAATAAATATATGGCCATATGGAATATTAAATTGATGGTGATTATAAAATACTACAAATATATTCAGAAGAATGTTTACAGGCATGTTTTGAACATCCACCTTGGATCATAAGCTGTTAAGATGAAGTCTTAATGGTCAGTATGTACAAATGTATACAGTAGTTACATTTGATTATGTGACTTATGATAATGAAGTATAATTAATTTTTAGAGCTAAAAATTAAAAATGAAGTCTCTGGGTTCCTGTAATAGGCCAGTTGAGAGTTAAACATTTTATAGTTGCCACTGGTAGTCTCTAGTGACTTTATATTCACGTTGAATTTAGGTAATGGTACTCACAGGGGAGCTGTGCAAAATAGAATAATATATAATTCTTCCCCAGTCACACTGAGTCTGTAGAGTGTATTTCATAAAAAACTCAGGGTAGCATCTGAGCTAGAAAAAAGGTTCCGTGTCCCCTTAAAACTCTGCATTCTTCAGCTCCTTCGCCAGCAGCTATATTATGATGCTCAGCCCAGTTTCTGTTGGTGTACGTATTAATAAACTAATTGTTGAGTAATTTAGGACAGAGACACTTGCTGTAAATTATGATTCAACATATTCCTCAAAGAACAGAAAGGAGTAGCACCAGGCCCCCAACCCTCGGCCCTGAGCCTTATCATGTTGGGTTACCCCTCTCTGGTGCCAGTTTCTTAGTTGAAACTTAAAAGTCACTGTCCAGTTTTCCTCCCGTGTAAATGGACACGGGCTAATTTATCCTTCTCCCAACACTTGGGAATGGAAAATTCCCTTCTGGACAAGTGAGAGGGCTGGCTTCCCAGGTCCACTTGGTATTGGCTCCTCTGAACACCCAGTTTATTCTCCTCTCCCACTGATTCTGTCCTATAACCTTAATGAGTCTTGTGGATTCAGTACTTATTTTTGGTTTATCTACAATGCAGCATGGTGATAATGCATTTCAGTTTCATTGATCTGCAAATTGATTTTTAAAGACTCCACTTAAGTCAAAGCTCTGCTTTTGCTTTCTTAATATGAAGTATCAGCAAACCAAAGTGTTTATGAATATCTGTGAATGAGTATATTAAATGCACATACATAACCTACTGGTGGATTTTAAAGAGGTTGAATGCCTTTTAAGTATTTTCTTTAGGTTTTAATTTTACCACTGTCTTTCCCCCAATATTCTTAAAGATGATGGAACACCTGAGGTAGGTAAAGGGCTGACTTTCTTCTGTAGCCATCAGTTTATAGTAATAGATTCAAGCTTATTTAAGTTTGAAGTGTGTTTATGACCTAGGATATGATCCATCAGTGAACATCGTCCTGTGTGAACTTGAAAAGCTTGTATTCTGCTGTGAAGTGTACTTTTATCAGTTAAATCCAGTTGGTTGAGGGTGCCATTCTGTTCTTCCATATCCTTATTTTTCTAAACTTAATCTGTTATAGTTGTAATCGTGCGTTAGTTTGTCTTCTTTCAGTTGTTTTCGCTTTGTGTATTTAAATGTTGTTAGGTACTTACTCATTTAGGATTCGATTCTGTCTCAGTGAACTGGACCTTTTAACATGAGAATATAGACACTGCGTCTTTATGTAATGTTTACAGGGTAAAGTTTCCCATTCTTTCACTGGTACACCTACCCAAGTCTTTTGAAGTCAGTTTCCTATAGGTAGCATATAGTTGGTTTACTTTTCCCCCTATTCCCATGTAATTATTGACATGTTCTGGACATTAGTTTGAGCAAACTCTGGGAGGTAGTGAAAGACGGAAGCATGGGGTGCTGCTTTTTCGGTCATCCATTTCCTCTTTACTGCCACCTTTTAGGTAATAGGATCATTTCTAAGTATTCTACTTTTATCTATTATGATTTTGACTGGTATCTG EMBV3_24545 CAGCAGTCGGTGGGCGCTTGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGCATCCATACA Gene GeneID:509264|PHF17:NM_001015559:14_cdna UTR3_Alt 2 NULL GeneID:509264 17 GENE PHF17 JADE1 PHD finger protein 17 EMBV3_18915 TAACTGCGGGGGAGGGGGAGGCTGAGCTACACTACTGCTAATACTCTCTGCCTTGTTTTT Gene GeneID:511413|ZFYVE21:NM_001079587:217_cdna Constitutive 1 NULL GeneID:511413 21 GENE ZFYVE21 NULL zinc finger, FYVE domain containing 21 EMBV3_12353 TTTTTCCTGGTCAGAGTCCACCAGCGGAAGAAGCAGGCAGACTATGAGGTTCAGCAGCTA Gene GeneID:786607|MUC16:XM_002688785:165_cdna Constitutive 0 NULL GeneID:786607 7 GENE MUC16 NULL mucin 16 EMBV3_20549 ACACTGAACTATTAAACAACAGACTCCGTGGACCTGCTGAAACAAATGGTTGCACAGAAC Variant GeneID:509502|PTCD3:NM_001046034:65_cdna 897^982 1 EMBV3_12713 GeneID:509502 11 GENE PTCD3 MGC137113 Pentatricopeptide repeat domain 3 EMBV3_10522 CTGCTGAGAAGACTCCGTGGACTATTTCCCAAGAAACCCCCACGTACACCCCTTCACAAG Gene GeneID:517805|FOXP4:XM_002697234:407_cdna Constitutive 0 NULL GeneID:517805 23 GENE FOXP4 NULL forkhead box P4 EMBV3_21967 CCTGCTAGAATGTGACTTTGGGGTCATTCTGTTCGTGCTGCAAGTGATCTGTAATCCCTA Gene GeneID:540251|HOXD10:NM_001099105:37_cdna Constitutive 0 NULL GeneID:540251 2 GENE HOXD10 MGC159904 homeobox D10 EMBV3_08578 GCAGTTATGAATTTGAGTTTGTAAGTTGTTCTTAAAATGTATTTGCTCAATTCTAGATCC Gene GeneID:505341|HCFC2:XM_002687642:807_cdna Constitutive 2 NULL GeneID:505341 5 GENE HCFC2 NULL host cell factor C2 EMBV3_24503 GGAGCGGTGGAACCCCACGCAGAATGTCAGCCAACGTGGACGCCTCTGTGATGTACAGGA Variant GeneID:616156|CDC34:XM_002689138:116_cdna 485^540 1 EMBV3_12114 GeneID:616156 7 GENE CDC34 NULL cell division cycle 34 homolog (S. cerevisiae) EMBV3_19480 TGAGATGACGGACCGCTACACCATTCACAGCCAGCTAGAGCATCTGCAGTCCAAGTACAT Gene GeneID:574400|SF3B5:NM_001025350:11_cdna Constitutive 0 NULL GeneID:574400 9 GENE SF3B5 MGC137070 splicing factor 3b, subunit 5, 10kDa EMBV3_14844 GTCCTACTGGGGATGTACAATATAACCATCCTTCTGCTGGATTCTCTGCTCAACAGGTAG Gene BVT0102_108715 - 0 NULL GK000007.2:60703488-60809069 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20509 CTGGAAGATTTGCAGATGGGCGGTCAGGCGTCCGTGACTGTGGCATTTTGCAGAAAAACT Gene BVT0102_273967 + 1 EMBV3_37846 GK000016.2:55466948-55487724 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069659 TCONS_00069658 1 XLOC_042023 Coding TCONS_00069658 XLOC_042023 NonCoding Coding RABIF 16:55485586-55490536 j TSS51894 2456 1 TCONS_00069658_2 109 0.0557817589576547 2 0.50414225095979 0.000398853700306769 5.72710772478901e-05 0.000290121149439064 4.05673422529356e-05 4.82422117045811e-05 7.75824872986173e-05 0 0.000122799966529738 9.62537114958544e-05 5.96152005411957e-06 0.000393772018021104 5.18882928612867e-06 0 1.91494781370282e-05 7.59613571960445e-07 0.0053854847478108 2.57668281664744e-05 0.00149099173152494 6.71488447133572e-05 0.000367101825680341 0.00142639883399908 0.00050976188965538 0.000723534425575158 0.00040355424621499 3.10261649305011e-05 0.0003589046219383 0.000260030281255 0.000211296202805133 4.87296893786373e-05 4.84487453152798e-05 NM_001040596.2 RABIF Bos taurus RAB interacting factor (RABIF), mRNA. 8e-146 522 99.32 0.119706840390879 NM_145510.1 Rabif Mus musculus RAB interacting factor (Rabif), mRNA. 5e-73 280 81.67 0.118078175895765 0 noncoding 0 0 0 0 -0.0814822537303984 0.509942843794168 -9.34284586668749e-05 0.998953508951598 CTGAAGAGCTTGAGACTGCAAAGGGCACTCTTCCTCCCGTCCATGAGGAAGAAGCCGGCGCTGGCCGGCGGCGGCGGCCCGGAGGGCGACCTCCTGCAGGAGCACTGGCTGGTGGAGGACATGTTCACTTTCGAGAACGTGGGCTTCACCAAGGACGTGGGCAACGTCAAGTTCCTGGTCTGTGCAGACTGCGAGGTGGGCCCCATCGGCTGGCACTGCCTGGATGACAAGGACAGTTTCTACGTGGCTTTGGACCGGGTTTCCCATGAGTGACGCGGGGGTGCGGCTCCCCCCTACTATTAAAGCTTTCTCCAGGGACTGCCCTGTCGCCTGCTCTGCACTGACATCCACTGTGAGCGCCACCCGCCCGTCCGGCCCAGGCCCACGCGCCTCCTTGTGGCCTCCGCGCGGGCGCTCGCTTAGGTCTCCTCCCCTCCGCTCTCCCGGCTCTGGACACGGTACTCCCGCAGATCTCCCCTCCCGGCCTCCCTCCTGTGCCGGGCTCCCTGTCTCCACTCAGGAGTTAGGCACGGTCCGCCCTGAGGACACGTGACCCAGAGCACTCACGACGGTGCTGACCACTGAAACCTGCCTTTGGGTCTTGTTAAGGAAAGCGCGCGAGCACCTCAGAGCAACTTGTGTGGCTGACTTTGTCTACAGTAATTTATTCTCTAAGAGTAAAGCATTTCCAGACTGCAGGATTCCAACCACCCCTCAGAAGTACCTTACTTTGGATACACATCTGAGACCACCTAGGGGGTCTCTCCTGGGGCTGATGGAGACTTCACTGTGCAGGCGGCCATGGCCCCCCTTCCCTTCACACCCTGCTGTGGTTTCTCTGTGGGGAAGCTCATCACTGCTGTCAGTGAGCTGCACATCAGCTGTGCGCTCCTGTCTGCCGGCCACGCCAAGGAGACCCCGGCCCTGGCCGTGCACTCGGCATCTCCCAGGATGAGTGGAGAGGGTGGGGTGCTGGGGGTGGTCTTCGCCGTATCTCGCGCGGCTTTCTGTGTGTTTTTCCTGGACCTGTAACCCTTCCCTGGCACCTAGGGGAGACGACACAGTCCACACACAGCTGGCTCAGCAGGACTCTGCAGGGGTCAGACCTCCGTCCAGTGCCTCTCATTGTGGTGGGGCTGCTCTGACAGTTCGATGTTCAGCACCCTTCTCGGTTCTGCCGTCTCTCTCTGAGATGCCTCACCGGCTTGGGAGTCCGTGAGGCCAGGTTCCCAGCCTCCTCCCGCCTTCCCTGCCTCTGAGGCTCAGGAGACTAGAACGGGAGCGAGGACTCCATGGAGACCTTACAGACATTCCTTTCCCCATTTTCCAGCCGCTTTCTCCCTCCTCCCCCCAGAACTTACCCTAAGGGCCCCCCACTAAAGTGCAGGCCTTGGACACAGTTTTGCAACCAACCTCTCACCTGGGCAGGTGGCTTCAGTCCCCGGCTGTAGACTCACAGGCTCTGGAAGATTTGCAGATGGGCGGTCAGGCGTCCGTGACTGTGGCATTTTGCAGAAAAACTGCACATCCCCTCAGGTCAGAAGGGACAAACCACGTAGATGCCTCTGGGCACATACAGCCCCTCAAATTATGAGCCAAAACGTGGGCAGTGTTTTTTAAATTGGACCTTTCCTTAATCACAGAAACGGTGTACATTCATTGCAGATAAATACAGATGCGTGTATAAAGTTGTTTTTAATCACTCGTACTTGCACCGTCCAGAAGCGGCCGACGATAACGCGGTGTACGTTCCTCTCAGTGGTTTTCTGTGTGTACTCGTGTAGGATTTTCAAACCAAACACGAGGTCACATTGTGCTCTCATAACTTACTTTCTCCATTTAACAAAATACGGGCTTCCCACGTCAGTAAACGTCCGCTCTGCCTCCATCGTGTTGAGTCGTTACCTGTACTTCTGTGCTGTAATTTGTTTAAACGATCCACTGTTAGACTGCCTCCGCTTTCTTGTAAATCATGTGATGTCAGTTGACTGTCCACGATTTCCTATTATTTCCTCGTGCTCGTGAGCCGTGGGCTTGCGGTGGGGGGTGTCCCTGGGCTCCGCTTCCTGACGCGGTGCCCCGGAGCGGCGGAGCCCCTCAGCCTCCTGCCCGGCAGTTCCTGACACTGGGTATTTATTATCTTAAATGAACGTGTTGCTACTGTAATGGGAGGAAAAATAGTGTCTTGTTTTAATTTGTGCTTATTTCTAATGAGTATTTTACATACTTGTCATTTGTGTTTCTTTTTTCGAGAATTGCCAAACGTTCCTCCAGTAGCCAAAAATATAGTTGTTTCTCTGCCTTTTCAGCTTGATTTGAAAGAAATAAATGCATTTAAGCAGTGGCAATTAGATTCCTGCACATCCTTGGGCAGAATATAGAGGTTGAGACAGAAAGGAGGGCTGAAACCTGTGCCTCAGGACCATCCTGGGGTCTCTTGGCTGAATAACCAACCC EMBV3_15005 ATGCCATTGTGTGTTTACGCCACGTTCTGTTTATCCATCGACCCCTCAGTAGACACTGTG Gene GeneID:100337462|LOC100337462:XM_002687986:83_cdna Constitutive 0 NULL GeneID:100337462 5 GENE LOC100337462 NULL inositol oxygenase-like EMBV3_13308 ATCTCTGTTGCAATTGGACATTTATTTGCAATATATTGGGTTGGACCAATCATAGGAGCT Variant GeneID:281008|AQP4:NM_181003:4_cdna 683^763 3 EMBV3_11967 GeneID:281008 24 GENE AQP4 NULL aquaporin 4 EMBV3_37874 CCGTCTCTGTTGACACAAGACACATGTGAATCCACTTCTCCTGGGGAAGGAAGTAACCAG Gene BVT0102_078378 + 0 NULL GK000018.2:36696380-36788792 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083080 TCONS_00083081 1 XLOC_051174 Coding TCONS_00083080 XLOC_051174 Coding Coding CYB5B 18:36674530-36700958 = TSS62526 5561 1 TCONS_00083080_2 146 0.0240963855421687 5 0.789760472244296 0.00581401556403099 0.00497862718095883 0.00426488307814015 0.00338472668371796 0.0046897849885602 0.00310606435492719 0.00562447541068958 0.00615227936020494 0.0083743025017486 0.00161127249099833 0.00080132008285381 0.000154696487962381 0.000889304359719667 0.00198347855052273 0.00169976407323771 0.0198660265227653 0.0124469680316151 0.0119188313560512 0.00517162739713901 0.003174166852272 0.000901532411017404 0.00765081094728595 0.00537410959309334 0.008080315722168 0.00201441583812479 0.00344537303277139 0.0026287885157293 0.00209565418441967 0.000914790699492712 0.0041162653297234 NM_001163782.2 CYB5B Bos taurus cytochrome b5 type B (outer mitochondrial membrane) (CYB5B), mRNA. 0.0 1640 100.00 0.163279985614098 NM_030579.2 CYB5B Homo sapiens cytochrome b5 type B (outer mitochondrial membrane) (CYB5B), mRNA. 0.0 1220 74.94 0.344362524725769 TCONS_00083080_2 sp|O43169|CYB5B_HUMAN CYB5B_HUMAN Cytochrome b5 type B; 8e-86 252 80.82 0.993150684931507 1 coding 0 0 0 0 -1.79945111739258 0.0358681402548284 -0.146725429363557 0.0770661645055311 GTTACGGAAGCTGGTGAGGACAGAGCGGGAGGTCGACTTCCAGGAAGTTGGTAGTGGAAACCGGAATAGCGGTGGAAAAGAGGTTATCTCAGGCCCAATGGCCACTGTGGTAGCAAGCGGCGGCGATGGAAAAGAGCAAGGAGTCGAGACTTCCGTCACCTATTACCGACTGGAGGAGGTGGCGAAGCGCAATTCCCCGAAGGACATATGGCTGGTGATCCACGGGCGAGTCTACGATGTCAGCCGCTTTCTTGACGAGCATCCTGGTGGAGAAGAGGTTCTGATGGAACAAGCTGGAGGAGATGCAACTGAAAGCTTTGAAGATGTAGGCCACTCCTCAGACGCCAGAGAAATGCTCAAGCAGTACTATATTGGTGACGTGCACCCGAATGACCTTAAACCTGGAGGTGGTAGCAAGGAACCTCCGAAAAGCAATACGTGCAAAAGCTACTGGTCGTATTGGATCTTCCCCATCGTGGGTGCTATTCTCTTAGGTTTTCTGTATCGTTACTACATGGCGGAGAGCAAGTCCTCCTGAGGAGACCTTGTTGAAGTCTGGAAAGCATTTCCACTTGGGAGCAAGAACTAGAGACTTATTTGGAGCCTGCAGCGGTGCCCTCTTCTCGAGTCCTGCCATTTGTATTCTTACCCCTTGGAACCCAGACCGTTGGCCAGACGTCCACCTCAGCTCCACGGCCGTGTCCAAGTCATCTCTCAGAGCCTTACTCTCAAAGCACCTGCTCGTTTTTCCGTATCCTTGCCTTTGTTTCCTCTCTTTACTCTTTTCCAGGAGCGCCTTTATGTTTCAGGACTGTCTTCTGTGATTACAGTCCACATGTCATTGTGGCATTCCCTTTGGTAAAATGGCCTGCTTTCCAGTGCTTCAAACGCACACTAGACATATTTAACAGCTTGTCACGTTCTGGTTTTGAAGCTTTTATTTTTCCCTTTTTCTTTTAAGTAAATGTTCCTATTTTTTAAATTATGACTTAATTTTATTATTTATCATAAGAGGTTTTAATTCATGGCATCAGGTTGCACATCTGTGACTTAAAATGCAACTGCAGAATTATCCTGTTCCTTGTTTGTATTTGTTAAAACTGCCCAAGTGTAGCAAGGAGCCCTTGCCACCCTCTAAGGCATCAGATGGTGGTGCTGGGCAGAACGCTGCTTCCCTTTTGTTCATTGGGAGTGGAGAGAAACAGGGAGAGGGAGAGATGAATTAGGGTGACAGAGTGGATTCACAGTAATCTTTCTTTTGAAAAATATTGAAAAATACTACTTTAAGGGCAAGAGTTCAGAAGAAGCACTAAAACTTTCATCCTTTATTTTGATTTGGCACCAGTTCCTAACCATCTTTTTTCTTCTTTTTAAGTTACCATCTTTTATGGGTAAAATGCAAGTAAGTGTATCTTTAGAGCTTTACAGTTTTATGAAGGATTTTGCTGTTTTTTTTTTAATTAATTGGCAATGTTTTATCCCCCATTTTTTAAAAGTAAGAGACTCCAAATTGATAAAAGATACAGTATTTGATCTTCTGTTTGCCCCAGTAAAGTAACTCCCATGGTAAAGCAGCATTTGGAAGCAGGAGAGTGGGACAAGAGTGTTTTCCACTTCATCTGTATTTTACCTCCATGGCTCCAATTTGTGGTTTTGTTGTTTTTCCATTGAGAGGGGGGGAAAAAAGTGGTAGTTACTTTTTTTTTTCCCTTGGATAACTGTTTCCGTGAGGAGTAGGTTATTATTCAGAATTATATTACTGTTTCTTCTCAGTTCAGGCGTTTCTCTGGCGTATTTGGCTGCTCTCTTCCTCTCTGGAAGCACCTGAGGAGACCGTTCACTGGTAGTTTTCTGCTGACGACTGTGGTGATTCTTCCTCCCTGTCCTTTGAGGGTGACCAGTCTGCTCTGAGCCGTTGTCACGTACAGCAGGGAACCTCGTGGTTCAGGAAGGACCATGGTCACTGCTCAGCGTCTGCTCCCCTCTTCCTGCTTGCCAGAGACTTGACAGGACAGGAAGCTACACAGCAAACCAGGGTCTGCCCATGCAAACTGCTTAAGAAAAAGTTCAGCCCAGGTCTCGTATCCTGTGATTTAGCAGTTGAGCAAATTCAGGATTCATAAAAATAACATTAACCTGGTAATTGTGCACTTGGTTATGACATTATGGAGTAATTTTAGGGGATTTCTGGCCAGCTTTTATATGTCAGGGATGTGGGCTTAACTTTAAAATTTTTATCGTCTTTAGAAAATATTTTGTATGCATTATAAGATGCCAATTTAAGACAATTTACTGAAAGAAAAATCTTTGATAATTATGTAACAGGGGTGGTGTGACTTGATTACTCCTCAATTTGAAGGCAAAGAAGGGTTGCCTTGAATAAGAATTGATATTTAATTGCTGTAATCATTTAAGTCACCTGATGACATGGGCCCACACTGGGGTAGAAATGAAGAACAAAGGAGTATTGAGGAGCTGGAAAAGGGAACATTCAAGCTAAAACTAAGCCAGAAGATAACTTGGATCAATTAAAAATGTGTTGGCAGTCCTCAAAATTGAATGGAAAACATCTGGCTTAGAAGAAATATTAAAGAACAATATTCTTCAGTAAAATTTGTGTTTTTTGATATTTTTTAAGGTGAAGATCACTGCAAAAGGTATGTTTTTCTGTTTCATATTGATTGTCGTTTCCTGTTTACATCTGGACTTGTTTTCATTCAGAGCCAGAGGAAAAGATTTTCAGACTTTGTCTCAGCCAGCCATGAAATCCATCCAATACCCAGGGCTCTCTTTTGATCTGCTAATGTGATGTCACTTTATGTTATAAAAACCACTTTTGGGTCCACTTATTATTCTGCTGCCTACATAAACAGCCAGGTGAAAGGTAGAGCTTGTGTGAGAGCTTGCAGAGGTTTTTATCTAAACAATAAAGTAATACAGTATATTAGCCAAATCTATCAAAAAGGACTTTTGTTTGAAGACATAGATGGGAATTCTTGAAACAGCCTCGACGTTGATGGGTTGTAAAAAACCCCTCTGCAGAGCCAGTGGAGCCAGCCCCTGTTGTCCCGAGCCTCCTGGGGTGTCTGGAGTGTTCGGTTGTTTATTCCCAAGGAAGACTTAACCGCCGGCGCCCACCATACTGTCAGCATAATGGCTGGAGATCACAGGAGAGGAGATGAGGGGAAATTAGTGCCCCCAAATAAGGATGTTAGTGCCGGGTCCCAAGATTTCCTGCCTCTCTCTCTCAGGAGTTGGTTTTGGTTTCCAAATGACTTACATTTTGTAAAGACAGGAAAGTGGTGGGGACAAAGTTTACACTGTGTTTAGTTCTCATGTGACCACTTAAGCTGCAACAAAAATCCATTGGAACCTATAATTTGACCCTGTAAAGTTCTTTCAGCAATTGTCATGAATGCACATGTTGTGAAATAAGAACATTGTTGTGTTTACACTCACTCAGTTCCCATGTGGAGCAAAGAAAAATGCTTTTCAGGCCAGATATATCATTACTTACAGAGTATCTCAAGTTTAAAATCTCAAGTGATACCCGTCTGATTAAATTCCATTTTAGAAACACAGAACAGTAATACTGGTTACTTCCTTCCCCAGGAGAAATGGATTCACATGTGTCTTGTGTCAACAGAGACGGTTGTTGTTTTTTCTTTCTTTCTTTCAACCATCTTGTTCTTTTGCCAAATATCATGAAAGTAATGAGTTTAGTCCCATCTGGCGGCTGTGCTCTGAGAGAGCTGGGTTTGTAATTTGTTGGGGGTGATCTCAGAGGGGAGGTTCCAAGAAGCAGAGAGGTATTTTTCAGATGACCTACTCCACACCTAGCTTCTCACTCATGAACTTGAGGGCCCAGTTGGCACCTGCACCTGATTCTCCCTTTGCTGTTCAGGCAAAGCACGATGATTTCACTTTCTTTTGATTTTACCCTCCACTCTGAGCAAGTAATATTAACATTCCTTTTGTGTATTCAATAAATGGAGTTTGTTTACCTATTTTATCAGCATATTTTGAACAAAGATCTTTGTCTGCTGGAATGTGCACACAGTGAGTGTTTGTTTAGAACGACACACAATAAAGATACTGTTTTCCATTTCTTGCCCTGACTACAGTTATTTTGTTTGTTTGTTTTAATTTCTTTTTTTAGTCGAAATTTTGGTTCTGTAGTTCTCAGGTGTTCTGGAAGAAAAGAATTGGAGAGCATAAAAGCCGCCTGTATCTGTGCTAATAGTGGGGTTAGTGTAACTGAAGAGAGTTCTGTGGTTCTTCAGGATTCTTGCTGCTGTTGCTCTTCCCTTGATGTGTGTTGCTCATTTGATAATTACGAGAGGCACAAATCAAGACTTTTGCTGTGTTAACAGATATGATATGGCAACGAGGTAGACAGGTTTTTACTGAAACCATCTGATAAAGAGAAACCAGTTCAAGGTAATAGTATTTGTTATCTATAATGTCAGTCTTCAAATGGTTGTTTTTCTTGGAAATAGCTAAACTGTTGGGGGAAATTAAGCATTGAGATCGAAGTTCTAGTGACTTAATAAAACAAGGTAAATAAGCCATTTTTACAATTACCTTTTAAAACACACTGATAGCCTTCTAACAGTACCATGAGACATCATTCTAGGGTGTAGTTATTTCACTATCATATGAATTGAGGATTACTAATAGAAAAGTCCCATTCTTGTTGCTAGTGTTTGAGTCTAATGTTTCATCTTCAGTCCTAATAATTCACTGTTCCTGATGCTGAGTATTTGGCAAGTATTTGACAAATCCTGGTTGATTCCTGAAAACCTGAGATGGAAGATTGTGATTTCAGTTGTGTAAATTTAAGGGACCAAGCACCCACACAGACTGCTAAATGATTGGTAATTGCAGGTAACATAGGTAACCTAACATTAATTAGCTTAAAAGATATCTGTATACTCTGCAGGTTTTCCTCCATTTATGAGATGGTTACACCCCAGTAGTGAATATCGTACTGGATATCGCTGGCCCAGGTAAAGATCAAAATTCAAAAGTATGATTTTTACTGAATGCATATCACTTCCACTGTCATAAAATAGAGAAACTATAAGTTAAACCACGCGAAGCCTGGAACTGCATTTTCAGGGCCAGTCAGCTTAATCACAAACGTAACATTTTAGAAAACAATTCTTATATGAAGCATTCAGGAGAGACTAGGGTTGGATTTCAGGCAAAACGTGAGGACACAGTTGTAACACTCATGTATGTGCCACCTATCTGCCGTGCAGCATCTTAGATGACTTCCACACATTTCTGATTCCGCAGGGTCTTTACATGGAAATCGAGGATATCCAAATTTTACCAGTGACTTGAGGCCACACAACTGAGAGGTGAGCTGGATTTTAAACCCAAATCTAGCCCCACAGCTCTCAATCTCTAGTGTTGGTTGTTCCCATATGAAAACTAAGCTCTAGAGTCTTCCCTGTTGGTTCAGTGGTTCAGACTGTGCTTGCACTTTCCCCTGCAAGGGGGCACAAGTTCAGTCCCAGGTGAGGGAACTTAAGATTCCACAGGCCATGCATCAT EMBV3_10902 CTGATGTCGCAGAAATTCCAGCAGTTCCGGGGCCTCTGTGAGCAAAACTTGAACCCTGAT Gene GeneID:520521|DLGAP4:NM_001077942:1141_cdna Constitutive 0 NULL GeneID:520521 13 GENE DLGAP4 MGC155295 discs, large (Drosophila) homolog-associated protein 4 EMBV3_16181 AGTCGATGTCTGACTGCTGTGACCCTGATCTGGTCGATGAAGTGTAAGAAGCAGCCCCTT Gene GeneID:514858|TBC1D17:NM_001102012:220_cdna Constitutive 0 NULL GeneID:514858 18 GENE TBC1D17 MGC179414 TBC1 domain family, member 17 EMBV3_23802 CTTCTTCTCCATCGTCTCCCTGCTGGAGAGCCAGTCGGTCCCGAGCGAGAGGACCTTTGT Gene GeneID:524085|SLC41A3:XM_002697154:97_cdna Constitutive 0 NULL GeneID:524085 22 GENE SLC41A3 NULL solute carrier family 41, member 3 EMBV3_09409 TCAGGAGGCAGCCCAAATATCCTCTGAAGAGCGCCCCTAGGAGAAACAAACTTGTCCACT Gene GeneID:614643|LOC614643:XR_083624:359_cdna Constitutive 0 NULL GeneID:614643 3 PSEUDO LOC614643 NULL similar to ribosomal protein L23a EMBV3_40741 CCTTGAACACTTACATCATGGTGACCTACAGGGATGCTTGACATGAATGACAAACACCTC Gene BVV0102_091412 + 0 NULL GK000018.2:60443519-60459181 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087388 TCONS_00087390 TCONS_00087387 TCONS_00087389 1 XLOC_052457 Coding TCONS_00087388 XLOC_052457 Coding Coding LOC788860 18:60456808-60475736 j TSS64889 5249 1 TCONS_00087388_7 849 0.215850638216803 4 0.722882654409045 0.000195128067876313 0.000100281222742287 4.20517395518461e-05 4.61721125405919e-05 5.62926836308601e-05 5.34701460289449e-06 2.43161587798347e-05 2.7845742940431e-21 4.05241637903132e-05 0.000347423219005408 7.83963561697712e-05 8.4569426240588e-05 3.56246601322669e-05 9.89227923802278e-06 2.75020225512585e-05 0.00892925269746434 0.0077506528219421 0.00713291253472301 0.000136430595793334 8.67109724276554e-06 1.83142066713369e-05 0.00368459005376224 0.00420140900062331 0.00525178276758494 2.53479065128007e-05 7.67700044168371e-05 2.20430108059048e-05 0.000564280360767542 0.000537871070273498 0.000761496002621047 XM_001787818.3 LOC788860 PREDICTED: Bos taurus zinc finger protein 479-like (LOC788860), 0.0 4625 99.77 0.491141169746618 NM_021269.2 ZNF708 Homo sapiens zinc finger protein 708 (ZNF708), mRNA. 0.0 875 75.47 0.243665460087636 TCONS_00087388_7 sp|O43345|ZN208_HUMAN ZN208_HUMAN Zinc finger protein 208; 0.0 705 46.21 0.967020023557126 9 coding 0 0 0 0 -0.420119895028499 0.0633016903099102 NA NA CCAGTCTTCCTGCTGCTTTGTTTCAAAAACCCTCAGAGGCGGAGCCGGGTAGCCCAGAAGTTGGGCGCATTGTTTCTTGTGAATTGTTCTGGGCCCTGCTTTCTCTAATGAGAACTCTCGGAGAGAGTGGAGAAAGAGAGCACCAAACCCAGGATGTGATTAGCATATCAGCTTAATCTTGATTACCCACTACAGCTCAGGGACAGAGGAAGTCAGAAAAGAGCTCAGAAAAGGGAGAGAGAAACAAGAAGATGTTCTCTTCTTTTTCACTGCAGCAGTTTAAGGTGAAAGAGCTGTGTGGATGCCTCTAAAGGTATTTTCTCAGCATGTATGCGAGTTTGCGACATAATATCCCCAAAGAAGACTCAGAGCAGGAGGAAGAAGAGGAGGAAATGGCAGCTTCTCAGGGATGGCTGACATTCCGGGATGTGGCCATAGACTTCACTCAAGAGGAGTGGGAATGCCTGGACCTCGGTCAGCGGGAATTGTACAGGGACGTGATGATAGAGAACTATAGGAACCTGGCCTGCTTGGGTCTTGTGGTCTCTAAGCCAGATTTGGTCACCTTTCTGGAGCAAATGAAGGATCTCAGGAATATAAGGAGAATGGAGACAATAGGCATATACCCAGCTATATCTCCTCAAGACACCCAGGATTTGATGCCAAAGAAACCAAGGGTAGAAGATTTGTTCCCAAAAGCAAACCTAGGAATATATGAAAGATTTCACCTCAGAAACTTGGAATTAACGAAAGACTCAGAACATATAAAGGCATGTGAAAGACAGAGAGGATGTTTATATGGACATAAAGAAATTGAGACAGTTACAGATGATACAGACATTACTGCAGAAAGAAATGAGCTACATGAGTCAAATTGGGGGAAACACCCATTTCAGTCTTCAACATCTGCTGAGAAGTGTAAGTTTTTCAGAAAAAATTTACATTGTTTTGTGAAACATACTTGTTCTCTGAAAGGAAATGTGGAAAATCTGGGAGGTCCTCCAGTCTCTACTGTAAATACTCATTCAAACCACTCTGAGCATAGGCTTCGATTAAACATATATTTAAACATGTCTGAAAACCAGAAATTTAAAAATGATGGGAAAAACTCACAATGTAATCAATTTGAGGGATCTGTTAGCAGAAAGTCATTATTCTTCCACCAACAGATATTTTCTCTCCATTCCAAGGTGTGTAATGTTGATGATAATGGAAGAGATGTAATCCAAAGATCATTGTTCAATACATCCCATGATATGGTTAATACGGAAGAACTTTCTGTGTGTAATAAAATGAATCAGACCTTAAGTAAGAGCTCCAGCGCCAGTAATTACACAATTATTTATGATGGAGTGAAGGTCTATTCATGCAATGAAACTGGGCATAACTTTGAACAAGACTCAAACTTTATGGAACATCAGGGAGCTCAATCTTCACACAAGGATTCTAAAAGTAATAAATGCAGGAATATCTTTTATCAAGCATCAGGTCTTCCTCTAAATAAGAGTATTCATAGTGGAGAGAAAACTTACAATTCTGGTGAATATGGTAAAGTTTCTAATGAGTCTTCAAATCTCATTCAACAGCAGAGGATTCAGAATTCACAGAAACAGTACAAGTGTAATAAATGTGGGAAAGTCTTTAGTAACTCATCTAATATAAGTAAACATAGGAAAATACATTCAGGAAGGAAACCTTTCAAGTGTACAGAATGTGCCAAAGCCTTTAATCAGAGTTCAAATCTTAGTCAACATCGACAAATCCATACTGGCAGGAAACCTAATAAATGTAAGGAATGTGGCAAAGTGTTTATCTATTTCTCAAATCTTAGTCAACATCAGCGAATTCACATTGGGGAAAAACCTTATAAATGTGCAAAGTGTGGCAAAGCCTTTAATCAGAACTCAAACCTTACTCGACACCAGCGAACTCATACTGGAGAGAAACCTTATAAATGTAAGGATTGTGGCAAAGCCTTTAGCCGGCGCTATGGTCTTACTCAACACCAGCGAATTCATACTGGAGAGCGACCTTATAAATGTAAAGAATGTGGAAAAGCCTTCAATAAAAACTCAAATCTTACTCAACACAAGCGAATTCATACTGGAGTGAAACCTTATAAATGTAAGGATTGTGGCAAAGCCTTTAGCCAGCGCTATGGCTTTACTCAACATCAGTTAATTCATACTGGAGAGAAAGCTTACAAATGTACAGAATGTGGAAAAGAGTTTAGTCAATACTCAACTCTTACTAAACACCAACGAATTCATACAGGAGAGAAACCTTATAAATGTAAAGAATGTGGAAAAGCATTTAATAAAAACTCAACTCTTACTAAACACCAGCGAATTCATACTGGAGAGAAGCCTTATAAATGTAAAGATTGTGGCAAAGCCTTTAGCCAGCGCTATGGTTTTACTCAACATCAGTTAATTCATACTGGAGAGAAACTTTATAAATGTAAAGAATGTGGAAAAGCCTTTAGTCAATCCTCAACTCTTACTAAACACCGGCGAATTCATACAGGAGAGAAACCTTATAAATGTAAAGAATGTGGAAAAACCTTTAATCGAAATTCAAATTTTACTAAACATCAGATAATTCATACTGGAGAGAAACCTTATAAATGTAAAGATTGTGGCAAAGCCTTTAGCCAGCACTATGGTTTTACTCAACATCAGTTAATTCATACTGGAGAGAAACTTTATAAATGTAAAGAATGTGAAAAAGCCTTTAGTCAATCCTCAACTCTTACTAAACACCGGCGAATTCATACAGGAGAGAAACCTTATAAATGTAAAGATTGTGGCAAAGCCTTTAGGCACCGCAGTCATCTCACTAGGCATCTCAGTGTACATACTGAAGAGAAACTCTAGTAATGAAATAAGTGATGGAAGAAGTTTGTCCTAAACATGCATGTTAGAAAACACGAGACCATTTATATAAGAAAGATATGGAATGATGGAGAAATGTAAAAGAAAAAAAATGTAGAAAATGGTTTAATGAAAAATGAAATCTAAATAAATTCCAGAAAATCCATACTAGAAAGCTTTACATCAATCCTGTTTTCCAAAGTTCCTCTTAAAGAGAAGTACTATAGATAGTAATCCACAGTTAAAACAGATAGAAAATTGATGTTAGTGTGGATCACAAGTGAAAGTTTGATGTTTCAGATCAGATCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCTATGAATCGCAGCACGCCAGGCCCCCGTCCATCACCAACTCCCGGAGTTCACTCAGACTTAAGTCCATCAAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCACATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGATTCCCAAGAATCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGCGCTCAGCCTTCTTCACAGTCCAACTCTCACATGCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTCAGTATGCTATCTAGCTTGGTCATAACTTTCCTTCCAAGGAGTAAGTGTCTTAATTCATGGCTGCAGTCACCATCTGTAGTGATTTTGGAGCCCAGAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACCGGATGCCATGATCTTTGTTTTCTTAATGTTGAGCTTTAAGCCGACTTTTTCACTCTCCACTTTCACTTTCATCAAGAGGCTTTTGAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAAGTTATTGATATTTCTCCCGGCAATCTTGATTCCAATTTGTGTTTCTTCCAGTCCAGCGTTTCTCATGATGTACTCTGTTTAAAAAGGTACAATTATTAGCAATGTATCCTTGTTTACATTGACATGATTTGTGATTATTTGAAAATGAATGTAATTCAACTCTCTAATTACTCCATGATATGCTTCATTTCTAGTGTGTATGTAAACTTATGTTTTTGATGGTTGGTACCTCAAAGATGAGAGAAGCCCTTCTATCTAAGGAGAAATCATTTATATGTATTCTCCATTAGAAGATTAAGGGCACAGTAATGTAACATGTACAGTAAACATCTAAATGGAGGTGTTTGTCATTCATGTCAAACATCCCTGTAGGTCACCATGATGTAAGTGTTCAAGGAATAATTCCACATACTAAAGATGTAATTATCAAGTTATGCTTTTAAAGGTTAATATAATGACAGTTCACTGAAATCTTGATGTGTTTTATAATATCAACAGAAATTATGAATATCTGACATATTTCAAATAACCTCTGATACCCTAAAATGTATGGGAAACGCTTCCCAGAAAATTCCTGTAATTACTGTAAGCCTTCTTTCTTGAATGATTAGCCTCCATTTTGTAATCATAGAAATCACAACTCTCAGATCATTATATCAGAGGAATGAATATCATTGTTTATGCTTGTAATCTGTCTTTTAATCATAGTTACACAGGGGAGTGTAAAATGTTTTATTCTGACTGTGTGTGATATTCATACATGTTAATCAATAAAACTGAATGGCTTCTTGTGGTAAAGTTGGTGTGAATGAAGTGTTAACCTACCACCACCATTAACCTCTCCCATCTTATCTTTGGTAGCACAGTGGGATGGCATCTGTAACAGTTAGTTTCCTTACTACCCTTAAGCCTCAAATCATTTGATCATGTATTTCCCATCATTTCTCCATTGTACTTTTCGCCCACTCTAACTACGGGGACATTGTGACGGTTCTAATAAGAAGGATCATACAGAGTACTGTTGAGAGCTTCCCTGACTGCTCCGTGCTGTTGCTGCCTCAGCGTCTGTCTGGGGAGCAGGCAGCCTGCAGGTCCTTGAACTCACACCAGCCAGTCCTGTGAGCACCTCCACTAGATGACCCCCTTCCTTGAGATCAGCAGTCTGGCTGAACCCCAGGTCTACTTCACAGGCCCCCCTTCAATGACACCCTCAGAGCTCACCAGATTCCTGCTCCTCTTGGTTTGAATGGACCCATCCACACTCAGCCTGGGGAGCCCACAGCACTTCACCCAGGGTC EMBV3_33518 TCTACTTGATGCCATGAAGCATTCAGGTTGATTGTTCTGTGTCAGAATAATATCCGTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21143 TGAGCAAGGAGATGTAATAGATAGCATAGAAGCCAACGTGGAAAATGCTGAGGTGCACGT Gene GeneID:507031|STX7:NM_001077864:5_cdna UTR3_Alt 3 NULL GeneID:507031 9 GENE STX7 NULL syntaxin 7 EMBV3_20108 ATAATATTCTCTCACTGGTTAATGTCAATGAATGTATTTGTTGCAGTTGGAAGGGGTTTA Variant GeneID:514919|WDR41:NM_001075690:6_cdna 808^992 2 EMBV3_22898 GeneID:514919 10 GENE WDR41 MGC142930 WD repeat domain 41 EMBV3_04257 GACCTGGTCCGAGCCCACCCGCTTCTGGAGGTAATGGGGCTACCTGCTTGACACACTGCG Variant GeneID:505869|NTAN1:XM_002698033:244_cdna 82^250 2 EMBV3_05335 GeneID:505869 25 GENE NTAN1 NULL N-terminal asparagine amidase EMBV3_37083 TGGCCATTCCGTGACTGCTTACCATCCTGCATAGTCTCCATTACAAAACACCGTGCTTGT Gene BVV0101_017925 + 0 NULL GK000016.2:79137119-79153854 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068363 TCONS_00068361 TCONS_00068368 TCONS_00068365 TCONS_00068373 TCONS_00068369 TCONS_00068370 TCONS_00068364 TCONS_00068372 TCONS_00068371 TCONS_00068366 1 XLOC_041664 Coding TCONS_00068373 XLOC_041664 Coding Coding NEK7 16:79010835-79139230 j TSS51198 3749 1 TCONS_00068373_1 255 9 0.970870912971011 0.00318991844888293 0.00229619701645342 0.00069335369369069 0.00245038802080488 0.00272867056679143 0.000666920952197591 0.00192512081043489 0.00187621445788454 6.77574465100428e-08 0.000673170583814773 0.00013502854328836 0.000267011535565717 0.000264718656617243 0.000390897027802944 2.58956732601324e-13 0.00289311802942043 0.00672941175149654 0.00792303591632407 2.02274313273973e-07 0.00157419571365736 0.000315302967966362 0.00254074225576789 0.00265844811123536 0.0056882160935031 0.00298621208118599 0.00188516671658412 0.000151754181610965 0.0010456617056057 0.000658571159292395 0.00221405953989278 XM_003587112.2 NEK7 PREDICTED: Bos taurus NIMA-related kinase 7 (NEK7), transcript 0.0 6304 100.00 0.931981861829821 NM_133494.2 NEK7 Homo sapiens NIMA-related kinase 7 (NEK7), mRNA. 0.0 1914 78.30 0.622566017604695 TCONS_00068373_1 sp|Q8TDX7|NEK7_HUMAN NEK7_HUMAN Serine/threonine-protein kinase Nek7; 0.0 515 83.77 0.996078431372549 3 coding 0 0 0 0 -1.06612406731586 0.0120374045035762 -0.28347620679999 0.00164235924064377 CTTCACTGTTCGCCCCACTTCCCCCCTGGGTCCCACCACTTCACAGGTTGAAGACAGAGATTTGAGGGTATCGAGTTCAGAAGTTCCTGTTGCTTCAGACAATGGATGAGCAATCACAAGGAATGCAAGGGCCACCTGTTCCTCAGTTCCAGCCACAGATATTTGATTTAATGGATGCCAAAGCACGTGCTGATTGTATCAAAGAAATAGATCTCCTTAAGCAACTCAACCATCCAAATGTAATTAAATATTATGCATCATTCATTGAAGATAATGAACTGAACATAGTTTTGGAATTAGCCGATGCTGGTGATCTATCCAGAATGATAAAGCATTTTAAGAAACAAAAGAGGCTAATTCCTGAAAGGACCGTTTGGAAATACTTTGTGCAGCTGTGCAGTGCGTTGGAGCACATGCATTCTCGACGAGTCATGCACCGGGATATAAAACCAGCTAATGTGTTCATTACGGCCACTGGGGTGGTCAAGCTTGGAGACCTTGGGCTTGGCCGTTTTTTCAGCTCCAAAACCACAGCTGCACATTCTTTAGTGGGTACACCTTATTACATGTCTCCAGAGAGAATACACGAAAACGGGTACAACTTCAAGTCTGACATCTGGTCCCTTGGCTGTCTACTGTATGAGATGGCAGCGTTACAGAGTCCTTTCTATGGCGACAAGATGAACCTGTACTCGCTGTGTAAGAAGATAGAGCAGTGTGACTACCCGCCTCTCCCGTCAGACCACTATTCAGAGGAACTGCGACAGCTGGTGAACATGTGCATCAACCCAGACCCTGAGAAGCGGCCGGACATCACCTATGTGTACGACGTGGCGAAGCGCATGCACGCCTGCACCGCCAGCGCCTGAGCGCGGCCGGCGGAGTGCGCAGCTCGAGTGTTCTTGAGCAAAGCGCACCTCCTCCTCCTGGGTGTTAAAAGAGTCCTACTTCAGAGCTAACGTGCTTTGAATCCTTAACCAGTTTTCATCTAAGCTTCATTTTGTACCAATTTAAGTCACCTTCCCGCAAACCCCAGTGACTTTGGAGTAGTCAGATTGCATGTTAGGAGAGCAGACGCAACACAGTGGTTCTTAATGGCGAAAGAATTTGTAGAATGATTGCTCGTTTTTGTGCTGATCAGTCGTGTCCAGGTAAACTCTCAGTGCCAAACACCGGCGATCTGGCTTGGCCCCATCGGGATGAAGCCCGAGGATGGTATCTGAGCGCGCGCCTATGTGCTGTCCGGTCACACGTGGACATGTGAGATGAACACAGTTTTAAACTTCTGTGACTATCTTATTTTTAGAGGTTTGAAGTATGTGTTTTAGTTCTTAGCATTGTAACTTTCAAATACAATTCTTAAAGCTAAATATACACATGAACTGTATTTTTGTTCATGAACTATTTGAGAAATTTAAAATCCTTAGCTTATACATTCAAAATGCGACTATTAAATGTGAAGAGATTTGGGGACAAAAATGTGAGTCAGACACTGAAGAGTTTTTTGCTTTGTTTTAGTATCTTTGATATTCTCCTTGCATTAAAATGGTATAAATGAATCCATTTAAAAAGTGGTTAAGGATTTGTTTGGCTGGTGTGATAGTAATTTTCAAAGTTGCACACTGCCCAAGGCTTTTTTGTGTGTTCTTGCTCTTTGTACATTTGAAGACTATTATTTGAATAATCCTGCATTACTATACTTCAGTTCCTTTATGAATTTAAATGCTCTACTCATGATTGTGCACTATAGTATATAGCATATGTTTTTATTCATAGAGTTTATTGAAATTCTGATTGGTCCCCTTCTGAAAGTTTTTTATATTCAAGTTACTTTCCTATTTATATTGTACATGAGTTTTATCCACTAATGTTTCAGATGTTCTGACAACATTATAGCCTTAAAAGAATATTTGGTATGCCAACACTTTTCCTGGAAGGAAAACATTTTTTTAACTTTTTAAAATTTGGGCTACCCTGTGTGTGTGTGCCCTGTCTTGTTAGAAAGGAAGAGGGGTTTGTGTTGTCCTGCGCCTGTGAACGCTGATGCCGTTTCAGTTCATCCGACAAGGTTGCAGATTTAGGATATGTTTAAAGAAGTGAAAACTAGCCACTACCGCAGCCGGAAGTTTTATGAGCTAAACATCTCTGTTGAGAAGCTTCTAGCTAAGTACTGTGTTTGTGCCCGAAGCTGCCCAAGGCGGTGTAGTTTACTGGAGCGGGCAGAGTTCAGTACCCGCCGTCCTGGAGACGTTTGCCCTGGACGCCTGCGCGTTAGCGGTGATCCACTCCCACACGGCCGCGTGGCCGTCACCACCTAAGGACCTCCTGCCGCCACGGAACCTGCCCAGTGACCCTGCCGACGGGAACCCCTCGTGCTCAGAGAGCACCTGCCCTCAGCCCATATAGCTGCTGGTTTTGTTTTTTCCATAGAAGTATTTTTCTTACAATCATTTGAATACTTTTATTTGTAAACATTTAAAATGTACAAAGTGTAGACGTCTTGTTTTTCTAAATTTAATCAGCTACAGTATCAGTTGTGAATTAGGGTGATTTATCCCAGTGCAGGCGGGGGAGAGCTGGCGGCTCTGCACCCCAGGCTGCAGGGACACCCAGGGCCCCCGGCGTCCCCACGCGCGTCTCCAGAGAATTGTCTCTGTTGACCTTAGTGTCCTGTTCATTTTAATGTAATATGACTGATGGAGATGAGATGTCCTCTACTTGGAACAAATGTGCTCCTTTTTCTTGCAATCTTTAAAAATACATCCATCTAAAAGCCATTAGCTGGACCCCTCACAGGACTTCTAAGCAGAGATTTAAACTTTTAAGTGAACCTATCTGCTAGAAGGAAATTGGGAAGAATTTAATGATCAGGGTAATCTATTATTGTTTTCTACATGTGGAAACTTTCTGTCTTGGATATTTTATCTTTTTTTTTTTTTTTTAATCTCAGTGTTCACATTTTTCTGGAAGAAACCACTGTGCACAAAACAAATTTTAATTCTGAATATTTCAAAGAATTGTGAAGATGAGAAGTTTTAATGTTTTATAATCACCTATGAAATGTTCTCTTTGTATTTCTGTTTATAAGTAAATTTTGTATTGATTAAATAAAACATTTGACTTGAAATGAGGAACAGTAAATGAAAGGTACATCTGATTTCTAACTCTTATTCAGACTTTGGTACCAGTTCCCCAGGGCACACAGTGGGGTGACCTTGGCCCGCGTGCTGAGGCCTAGGAATGGGGGACGAAGGGTATCCCTGTATACATAAAGTGCTCAGCGGTGTGCACTGATGGTGAGTTCAGTGAGCTGTGATGGCCACTCCGTGACTGCTTACCATCCTGCATAGTCTCCATTACAAAACACCGTGCTTGTATGCGTATACACTGCAGGTGTTGCTGTTAACATTTGCATATTTATTTTAACCAAAATGTTATTCATATTAAATGTTTTTTCTTTAAAATGAATGTATTATGTTTATATCCCACCAATGAATAATCTTATGCCTCATATTTCAATAGTACTGTAATATGAACTTTTGTGAAATACTTTTATTTTGTTATGCTTCAAATACACATACTACGAAGACTCTGTTGTTAGCTTTGAAAATTGTATAATATCCTAATAAAAATATAAAACTAAAAATAACCATAAGTTTTTCACGTATCTGTGATTCCCTGCACCCGACCCCCACTAAATTCTACTGCTGTTTATTTCTGTCGACAGTCAACCTACAGAAACAGTTCTT EMBV3_21595 CCAGGTAATGTTCTCTTCATAGCAGTTCCCTTAAAAAGATCAACTTTTGTGTTACAGTTC Gene GeneID:507983|LOC507983:XM_002685349:219_cdna Constitutive 2 NULL GeneID:507983 2 GENE LOC507983 NULL similar to KIAA1728 protein EMBV3_14324 AGTACACAAGAAAGCCCAACCACCCAGCCCCTGATTTCTTCTTAATTTTCCGTCGTGTGT Gene GeneID:527722|SPADH2:NM_001025338:5_cdna Constitutive 0 NULL GeneID:527722 26 GENE SPADH2 NULL spermadhesin 2 EMBV3_06379 TCAAGTGAAGCAAAAGCCTTCCATGATTACCCTTTTATGTCACCTCGATACCCTGGAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05340 AAAGCTGCAGTGTTTACTCTTGGGGAAAAATAGCCTGATGAGCTTGTCGCCTCACGTGGG Gene GeneID:517584|LRRC8B:XM_002686261:74_cdna Constitutive 0 NULL GeneID:517584 3 GENE LRRC8B NULL leucine rich repeat containing 8 family, member B EMBV3_02114 ACGTGCTGATGGAACTGGGACCCAGCATCGGGCAAAAGCCCGAGTGTTTTGATGCCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09766 CAGACATCATCAGTTGTCCCTGAGTTTGTTTTGTGTGTGTGAAATCAGCATATTTTAAGC Gene BVT0102_185179 + 0 NULL GK000001.2:65014688-65029457 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19452 CCTGAGGAACATGCGCTTTGCCAAGAAGCACAACAAGAAGGGCCTGAAGAAGATGCAGGC Gene GeneID:507270|RPL29:NM_001014862:97_cdna Constitutive 0 NULL GeneID:507270 22 GENE RPL29 NULL ribosomal protein L29 EMBV3_33322 TAAGAAGTTGTTCGGCAAAAGGAAAAAGAAAGGCACGTCGGTATCCCAGGAGGCGTCTGC Gene GeneID:782369|LOC782369:XM_002688279:49_cdna Constitutive 0 NULL GeneID:782369 6 GENE LOC782369 NULL hypothetical LOC782369 EMBV3_30759 TTTCAGGTCCTCCGTCTACTAGCCAAGCTCCAGCAGACAGAAGCAGAGCTCAGGAAGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26336 AGGACAACCCCGCTTCCGGAGCATGTGGGAACGGTACTGCAGAGGAGTCAATGCTATTGT Gene GeneID:511009|ARL8B:NM_001046071:32_cdna Constitutive 0 NULL GeneID:511009 22 GENE ARL8B MGC137658 ADP-ribosylation factor-like 8B EMBV3_14129 GCCAGTTGCCTTGGCCAGAGAAGGAGAAGCAGATGGGATTGTAGAACTTAAAAAGCAAGC Gene GeneID:532568|ELAC1:NM_001046327:143_cdna Constitutive 0 NULL GeneID:532568 24 GENE ELAC1 MGC137913 elaC homolog 1 (E. coli) EMBV3_41543 TGTCCCCTCAGGTCTGTTCTCTGCTCATGTTTGGTTCATATGCAATGGGGTTTGCTGGTG Gene GeneID:525964|LOC525964:XM_002699191:56_cdna Constitutive 0 NULL GeneID:525964 29 GENE LOC525964 NULL similar to olfactory receptor 900 EMBV3_28026 TGTACAAGTTCAAAAGGAAACGCCCCGGCAGGACCGTGTATGCCCAGATGCACAACGAGA Gene GeneID:618257|SORCS2:XR_084702:2_cdna Constitutive 0 NULL GeneID:618257 6 PSEUDO SORCS2 NULL sortilin-related VPS10 domain containing receptor 2 EMBV3_34091 TGCCTCCTACAAAGACCAGTGGATCCAGAGGTGAAGGTGGTGAGTCTGAAGCCTGAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28315 GTTGAGGAGATAGACAGACATGAGCAGGATGAGGAAGCAGAGGCAGACTATGAGGATGTG Gene GeneID:508445|HCLS1:NM_001035057:47_cdna UTR3_Alt 2 NULL GeneID:508445 1 GENE HCLS1 MGC127454 hematopoietic cell-specific Lyn substrate 1 EMBV3_30795 TCAACACCCAGCGCCATCACCCACTTCTTTGGCCAGTCGTTGCCGAGGCTTGTCTGTCTT Gene BVT0102_097113 + 0 NULL GK000030.2:40343614-40355918 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246868 TCONS_00246869 1 XLOC_151142 NonCoding TCONS_00246869 XLOC_151142 NonCoding NonCoding - X:40349905-40352070 - TSS184991 696 2 TCONS_00246869_2 97 0.126436781609195 4 0.680221811460259 4.88587225079819e-05 9.70043130708375e-11 0.000800944094247383 0 0 0 0 0.000196870428737442 0 5.90802021630193e-06 0 0 0 0 0 0.00155323759320766 0 0.000576787206148601 4.388667673493e-08 0.000222143582832397 0 0.000231119916111425 2.63552372429521e-05 0.000168597365949335 0 5.40809721233431e-05 7.99691392828628e-05 6.89943583671269e-05 1.74331500999492e-05 0 XM_005200656.1 LOC101904339 PREDICTED: Bos taurus uncharacterized LOC101904339 (LOC101904339), 0.0 985 100.00 0.783045977011494 0 noncoding 0 0 0 0 -0.143007922552073 0.503085098582932 0.000405474186307139 0.995415342450069 CAGCTTCGCGTCCCCACCTCCATCTCGGTGCACAGCAGCCTGCCTTCTGGGTCCTGGGCGGGGCCAAAGCCCCGCAGTTTGCTGGGGTCTCGAATCTGGCCGCCTCCAGCCGCTCCCACCCATTGCCCGGCCCACCGTGTTCCACAGCCCGTGTGGCCCGCTGGGAGGGAATCTTGCCCAGGCACTCCTGTTCTCCAGGACCGCCTATGGTTGCAGCCCTCAGTGCCTGCTGCCTGCCTCTTCCCTGGAGGTCCAGGTGTGGTCAGCCTTCTCTCGCTGGTGGGAAGCCACTGCCTTTCCTGCCACACGTTCCTCACCAAGAGGATCTCCCAGCTCCTGGGTGATGCTGCCCAGACCTCCTCAACACCCAGCGCCATCACCCACTTCTTTGGCCAGTCGTTGCCGAGGCTTGTCTGTCTTTGGCTCCAGGATGGCCCGCCATCCAGTTGGAGCCACAGATGAAAAGCAATGCCAGTGTCCAGCTGCCCCATGTGCCCAGAACCAGCAGCTCTGGAACCCCAGCCCCCGAGTACATTCTTGGAGTCATTTCAGGGCGGTGGGGTGGCGCTTTGGTTGGCATTTTCCAAGGCCCTCTCCTGCACCCTTTTCCTTTGGGTCACTGGTCTTTTCTTATTGACTGGTTCAAGTTCTCTATACATTAATGATATGAGCCCTGAGTCACATCTTGGTACTATT TCONS_00244235 TCONS_00244236 TCONS_00244237 TCONS_00244234 r 3' 6293 TCONS_00244235 TCONS_00244236 TCONS_00244237 TCONS_00244234 r 3' 6732 EMBV3_14573 ACGTTAAAATCGTGTTGTACTTCAATATAATTGTTAACTAGTTGTAGTTGATACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_02102 CCACCGTCACCCATTTCATTGCTCGCTGCAAAAGAGACGTGAGACTGACACATGCCATTT Gene GeneID:510359|TSC22D1:NM_001034377:85_cdna Constitutive 1 NULL GeneID:510359 12 GENE TSC22D1 MGC128409 TSC22 domain family, member 1 EMBV3_33851 CGTGGGTGCTGCTGGGAGCTGGTAATGTTCTATTTCTTGGTCTGGACACTTACATGGGAA Gene BVT0102_101575 - 0 NULL GK000015.2:21976901-22105287 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058484 TCONS_00058486 TCONS_00058483 TCONS_00058485 1 XLOC_036110 Coding TCONS_00058486 XLOC_036110 Coding Coding - 15:22076718-22091384 - TSS44041 3064 1 TCONS_00058486_3 442 0.265992167101828 11 0.79181725196045 0.000968286927341944 0.000664151157597988 0.000663289170461067 0.0005607637764525 0.000549700827847862 8.41979979973551e-06 0.00024935499076931 0.000168218777073247 0.000777827475926282 4.43059614472913e-05 3.96558527905412e-46 6.2546553612085e-09 0.000317018481210183 0.000305811123555542 1.26457901545553e-06 1.58703718164264e-10 0 0 0.000444866659780278 0.00044041928597801 0.000105034438972063 7.95031548165605e-37 0 6.35857647940358e-15 9.39426123815396e-08 0.000147504668995427 0.000327429626190232 0 8.22420632932722e-16 1.89233752013117e-08 XR_247728.1 LOC101928644 PREDICTED: Homo sapiens uncharacterized LOC101928644 (LOC101928644), misc_RNA. 0.0 764 84.19 0.22878590078329 0 coding 1 1 1 1 -0.14793697785151 0.230321520698909 -0.0155306599472874 0.833034782567488 GCAGAAATGGAATCCATCTCAGGGCAAAAAATGTCCCCCGCTCCAAGCCCAGACTTTGGGGCTTTTGGTGGCTCAGACGCTGAGGGCCGCTGAGGAGGCCTGCGCAGCCCTGGAGGCCCGCTGCCTGCAGGAGACCCAGAGGAGAGCCGGAGCCCTGAGCTGCCAGAGCAGCCAGAGAGAGTGGGACCTGCTCGCTCAAGCAGACAGAGAGGAGTGGGAGCAGGAGGCGCAGGTGATGCTGGGCCTGCAGCAAGTCCTGCAGAGTTTAGGGCAGGCGGCAGAAAAGCTCAGGCAAGCGGCAGGCCGGCTGTGGGCCCAGGAGGAGGAGATGCGGCTACAGTGCAGCAGGGATCAAAGCCCACAGGTCTGGAGCCGCTCCAGGAAGGTGGTCCAGCATCTCTCCGATGAGCTTCAGAAGGTGGTGAGGGAGCGGCAGAGCGTCCTGGATAGGGCCCTTGGTCAGCTGCAGTACCAGCGGGAGCTGAGCCGCCTCCAACTCTTGCACATCCAGATTGTTGCCTCGGGGACCCCTGTATGTTTGGAGAATTACCCTGGAGACAGGTTTTATGGAACCATCACCACTTCTCCCAGGGACCAGGCTGCTGCCTGCCCCCTGCTGATCCCCTTCCTGAAGAGCCTCACTGCAGCGCTAGTGGGAGATCAAGGCCACGGCCTAGGACTGGAGGACAGGGGACCAGGAACAGATGCAGATAAAGTTGACTTTATATGGGCCTCACCACTCTTCTCTGCCCTGAGGAAAGTAGACATCAGGTCCCAAGCTCACAAGGATGAAGCTGAACTGCAAGGACAGGTGCATCACAAACCAGCCCTCAAAAGCTCTCTGCAAGATCTCCCCAAACCTCAGATAATGCAGAAGGAAGAGCTGATACCTGTGCCGTCCACAGACCTCTCTGCCAGGGAGTTCGTGGTTTACCAACATGGCCTGTCCATCCTCCACCTCCTCAGCCCCCAGCTTCAGGCTCCAAAAATCACCCTGCAGATTGCTTCTCGTCTACCTGCCATGGGAGCCTCAGACAATGCCTTCCAAGGTTCCTTCTTCTATCAGAGAGCTGAAAACACACTGTTTGTTGGGAGAGAGTGTTTGGCGTCGGTGGGAAGCTTTGTTCTGCTGTTGATCCACTGTCTGGCCCACATCGCTGCCGATGACCTCCACCAGGACTCCAACCCTGCCTTTCTGAGGTCATTTTACAAGGGGCTGAAGGCCTATTTCAGGGAAGCATTCTCTATCACTCTGCGAATGTCGACAGTTTCCCAGGACAGTAAAATTGGCCAAAGCATAAGTGCTCTTCTGCTGGGAGAGCAGCCCATCTCTGAAAGAGGAAGAGACCTTCTCTCTAAACTCATTGTAAGAAAGCATGAGCCCCACTTGGAGCCAGAGTCGTCGGAGGAGTATATTAAGAAAAACAAAGATCTTCTCCTTTTTACCCACATGGAACACTTCCTAAAAAGCATCCTTGCTGCAGAGCAAAAACTCCCAAAAGAAACAAGAGATCAGCTTGCAGATGAAGATAAGGTGAGATGTTCGGGTGACCTACAGCACTGAGACCATACTTTGCTATATACTTTGCAACATTTTTGTGTTTTTTGTTTGGGACTATGTTTATCATTGAACATGTCAGCAGAACACAAGATTGGAAATGAATTGTGGTATGAACAGGTAATATCATCAGTCACTTATAAAACTTTATCAACAGATGGTGGATCTTAGGTCCCAGAGTTAATCCCTCTGCTTTCGGGCAGGTCAGGTATTAACCTTAAAGAACTGGAGCTGAGACTTGGACTTGCCCTAGTTCACCCAGCTGGAAGAGAACAGACAGTCACCAGATCTACTGCCTTCTCATTTGGGATTCTCCCACTGTTCCATAATGATACCTACTACTGTTTTGGTTTTAATCTGAAGCATTTAAAACATTGTTATATCTTTAAAAATCACCAAATACTTTGGTTCCAAGGAACAAACATTAATATTTTGTCACATATAATTTGCAAAGAGAAAAATTCCCAAGCATTATTATACTCATTATTCTCATGCAGAACAGTGACCTAAACATGTTGAAATGAAGATCAGCAACTCCCTAGAGACGTAGCTGAGCACCAACTCTAATCCTGGGCTCCAGTCTATTGCAAAGTTATCACCAGTATCTGGGGTGAAAGGTACATTTTTATTACATTATTTTATTGCACTGTTTCAATATCGTACAACTTTACAAGTGCACATATCATTAATGGACACTTCATGAAACCATCCAAATGAACATTCCCATGTAAGTGTCCAGACCAAGAAATAGAACATTACCAGCTCCCAGCAGCACCCACGTCTCCCCTGCCAGTCACCCATCCCCTGCCAGTGGCCACCATCCGGACTCCAAACGTCATAAATTGTTTTTGCTTATTCATGAATTTTACATCAATAGAATCATAAAATATGAATTCTTTGTTCTTCAAGTTTGTGAGATTTATCCACATTGTTGTAGGTAGTTGTCGTTTGTTGCTTCTCTTTGTTGTAAAGTATTCTGTGGTACAGACATATCTTAATTTATTCACCATATAGTGACCTACAGGTGGGTATTTTCCAGCTTGGGGTTATGTAAATAGTTCTGTGCACCTTTTGATGACTATACCTGGTCAGGTATTAACTTAGGACAAGTCCTGCATCTGAGGATATGGAGATGCTCAACGTTAGTACCTACCATCAACCGGAGTTCCGAAGTGATCACACATGGCCACCAGCTATGGATCAAAATTCTGACTGCTCTCCATCCTTATAAGAACTAGCATTTCCCCTCTTTTTTACTGTATCCATTCTCCCGGGTGTGTGTTTTTAATTTGCATTTTCCTAATGGCCAGTGGAATTGAGCATCTTTCATGTGTTTATGCAGCATTTGAAAATCCTCTCTCTGGAGATGCCTATTCAAGTCTTTTGCTGATTTGTCATTGGATCAACTCTTTTTAATTGATTTGCAGGAATTTTTTATTTTGCAACTATTTTTCCTCATTCTGTAGACTGCTTTTTTATAGAAATAACTACATGTTTCTTTTACTG TCONS_00060663 TCONS_00060664 r 3' 9863 TCONS_00060663 TCONS_00060664 r 3' 24528 EMBV3_09397 TTCATATCCTGGAGCTGGGGGAGAAGCCTGACAATATGACACAGAAGCCACTGCCCAAGA Gene GeneID:525407|LOC525407:XR_083580:223_cdna Constitutive 0 NULL GeneID:525407 1 PSEUDO LOC525407 NULL similar to phosphatidylinositol glycan anchor biosynthesis, class Z EMBV3_12804 AAGAGGGATGGAAGGAGGAGTCACTGGAGCTGAAATCAGGGGTGGTCTGGACTCTGATGT Gene BVT0102_004059 + 1 EMBV3_33935 GK000002.2:127818514-127821033 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103883 TCONS_00103887 TCONS_00103888 TCONS_00103895 TCONS_00103880 TCONS_00103882 TCONS_00103885 TCONS_00103892 TCONS_00103889 TCONS_00103891 TCONS_00103886 TCONS_00103881 TCONS_00103893 1 XLOC_062241 Coding TCONS_00103882 XLOC_062241 Coding Coding PAQR7 2:127808526-127820187 j TSS77052 3080 1 TCONS_00103882_3 350 0.0948051948051948 3 0.736106346483705 0.00489339807725668 0.00202244877561641 0.00149689531475386 0.00192268625264905 0.00012528600366232 0.000584475474121952 0.000999960991587187 0.000537405754467857 0.002212239251707 0.000188429796745678 1.08368896255498e-75 5.55411905096683e-29 0.000457509656815878 9.97392167496992e-68 6.17591269821213e-05 1.25227255551524e-36 0 7.09355425735187e-33 0.00220553868931034 0.00679395639604628 0.000122803382437455 4.13305730030587e-07 5.31171275181916e-26 5.19612737066627e-23 2.48287501511679e-33 0.000713527474959856 0.00163501514351503 2.29377398795406e-117 3.44688326022037e-236 6.19422253876729e-23 XM_005203177.1 PAQR7 PREDICTED: Bos taurus progestin and adipoQ receptor family member VII (PAQR7), transcript variant X8, mRNA. 0.0 4176 100.00 0.751298701298701 XM_005245745.1 PAQR7 PREDICTED: Homo sapiens progestin and adipoQ receptor family member VII (PAQR7), transcript variant X1, mRNA. 0.0 1943 81.08 0.670779220779221 TCONS_00103882_3 sp|Q86WK9|MPRA_HUMAN MPRA_HUMAN Membrane progestin receptor alpha; 0.0 617 91.57 0.98 1 coding 1 1 1 1 -2.66769741696451 0.00503532178761517 -1.30936326404593 0.000390900188013333 AGTTCTCCCCCGACTCGGGGCGGGGCCTCCGCCCGGCCGCCCCCTTTTATCTGCGCTCCGGATGCCTGGATGCCGAGGGCAGCCTCTCGCAGATCGGCTCGGCCTCAGGGGACAGAAGCCAGTCAAGTTTGCCTGATATCCATCAACCAGGCCCTGGACATTTGGTCTCAGCCCAGCTTTGCCTGCCTTGCCGTGTGATCTTGGCCCCCTGCCCAGCCCACAGCCATGGCCACAATCGTGGCCCAGAAGCTCAGCCACCTCCTGCCCAGTCTGCGGCAGGTCCACCAGGAGCCTCAGCCGTCTGTGCCATCAGAGCCTGTGTTCACCGTGGATCGAGCCGAGGTGCCGCCCCTCTTCTGGAAGCCGTATATCTACGTGGGCTACCGGCCGCTGCATCGGACCTGGCGCTTCTACTTCCGCACGCTGTTCCAGCAGCACAACGAGGCGGTGAACGTCTGGACCCACCTGCTGGCCGCCCTGGTGCTGCTGCTGCGGCTTGCCATCTTTGTGGGCACCGTGGACTTCTGGGGAGACCCACATGCCCTGCCCCTCTTCATCATCGTCCTCGCCTCCTTCACCTACCTCTCCCTCAGTGCCTTGGCTCACCTCCTGCAGGCCAAGTCCGAGTTCTGGCATTACAGCTTCTTCTTCCTGGACTATGTGGGTGTGGCCGTGTACCAGTTTGGCAGCGCCCTGGCACACTTCTACTATGCCATTGAGCCTGCCTGGCATGCCCAAGTGCAGACCATCTTCCTGCCCACGGCTGCCTTTCTTGCTTGGCTTTCCTGCACTGGCTCCTGCTACAACAAGTACATCCAGAAGCCTGGCCTGCTGGGCCGCACTTGCCAGGAGGTACCCTCCGCGCTGGCCTACGCACTGGACATCAGCCCCGTGGCTCACCGCATCCTTGTGTCCCCCGACCCTGCCACAGATGACCCGGCTCTTCTCTACCACAAATGCCAGGTGGTCTTCTTTCTGTTGGCTGCGGCTTTCTTCTCTGCCTTCATGCCTGAGCGCTGGTTCCCTGGCTGCTGCCATGTCTTCGGGCAGGGCCACCAGCTCTTCCATGTCTTTTTGGTACTGTGCACGCTGGCCCAGCTGGAGGCCGTGGCGCTGGACTATGAGGCCCGGCGGTCCATCTATGAGCCTCTACACACCCGCTGGCCCCACAACTTCTCTGGCCTCTTCTTGCTCACAGTAGGCAGCAGCATCCTCACTGCATTCCTCCTGAGCCAGCTGGTACGGCGCAAACTTGATCTTCATCGGAAGACTCAGTGAAGGGGGTGGCAGCTGGTAGGGAGGGAAGTATAGTGGGGGCCCAAAGGTCCGGATGGGAACAGATGGGAATAGATGGGAACTTTGGCTCAAGGTGGGAACAAGTCCTGGTAAAGGTGTTTTTGTCTGGCCCGCGGTGATTCTCTGTGCATTCCTCGGCTGCCAAGGGCAGCACTGGCCAGTCCTTGGATTGAGGATTGGCTGGAGCTGCTGGGGTCTACTCTTGGGCCTGCCCCAGCTGCCTGCCCTGGGAGAGGGAAAGAGAAAGAGAAAGATGTGGGCCACCCTGGTTTTGCCTCCCCTCACTGCCTCTCTCACTTAGGGGTGAGGATGGGGGATCAGCTGGGGCCAAGACCCTGACTTGGGGCTTCCAGATTATCTGGGAGGGGGTGAAGTTGGGATTTAGGTTAGAGTCAGATCTGAGCTGAGGGACAGGGAAAGCATCAGCAGTGCCCTCTACCCAGATCCCCTTGGGAAAGGACAGCCCTCTGTTGTGTGCAGGACTTTAAGGTTCCTTGAACTCCAGCTTGGAGTTTGGGTGTTCCAGAGAACCCCCAAAGGTCAAAGATTGTGCCGGGTGGAAATGGATCCCATCCAGTGCCCCACAGCTCTCAGTCACTGTCCCAGTGAGCTCCACCCTCCTATCACTGGACTCTGTGTCCCACTCATCCTGTTCCCATCTTTCCTGGGTCCCTCATTCACAGCTCAGTGTTTATCCATTCAGTGTTTCTTGGGCCTCTACTCAGAGACAGGCTATTGATGGGGCCCTGTGGATTAATGCAGGATTAAAGGCTTTACTATCGAATGAACTGTCAGGGGAAACACTGAGGAGGGAATAATTAGTGCTGCCTGGGGCCCTCAGGATCTTGGGTTGAGAAGGGTGAATAGGAGTTTGCAGATGGAGAAGAGGAAATGTATTCCAGGCAGAGGGAAAAACCTGTTCAAAGGCCAAGAGGGATGGAAGGAGGAGTCACTGGAGCTGAAATCAGGGGTGGTCTGGACTCTGATGTCCTGGATGCAATAAAATGACTGTGCCAACAGTTGCTTCCTTCTTGTCTCCTATCCTGGAGAGAGGGCCCCGGTGCACCCCTTGGGCCTGCTCATTGTGTTGGAGGAGGTTTTCAGGGGGAGCTTGGGGGTGGGCAAAGGGAGGAGATCCTGTTTTATCTTTGCCTGGGGGTGGGCCTTATTTACTGTATATGGGAACTTTGTTTTGATAGGAAAGGTGAGGTAGTTTTATTACTAAATAAATATTAGACGTTAAAAGAATATGTTTAAAATATATAATTTGACAAATATTTCATTTCTTGGTCTTTTAATCAAGGAAGATCTTTATGTATTGCCTTTTCCCCAGTACATAAGCAATAAATGGCAATATATGTACAGTGAAGGAAAATTAGGAAGTACAGGTAAGAAAAGCAAAAAATCTTGAATGAATAAGGAATATCACTCCACTGCTAAAATATCCTGTCGTGCATATATTTTATCTGTGGAGATTGTGGTTATGTGTGCGAGCATTTTTATATTTCTGAGGACTTAGAACAATGCTAGGCACGTGTGTGTGTGTGTGTGTGTGCACGTGCTGCTCAGTCGTGTCCTACTCTTTGTGACCCCATGGACTGTACCCCACCAGGCTCCTCTGTCCATTGGATTTCCAGGCAAGAATACTGGACTGGGTTGCCATTTCTTTCTCCAGGGGATCTTCCTGACCCAGGGATTGAACCCCCATCTCTTGTGTCTCCTGCATTGGCAGGCAGGTTCTTTACCAACTGCACCAACTGGGAAGTCCAGGTGCATTTCTGAGG EMBV3_00111 ACATCAAAAGTCTAAATTGGTCACAGAGAATGCATGTGAGGCCCAGGCAAGGTGGCCTCC Gene BVV0102_169983 + 0 NULL GK000008.2:77338918-77345881 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228251 TCONS_00228250 TCONS_00228249 1 XLOC_138462 Coding TCONS_00228250 XLOC_138462 Coding Coding SIGMAR1 8:77344917-77348638 j TSS170226 2352 1 TCONS_00228250_1 156 0.0871598639455782 3 0.368548387096774 6.67565976855704e-05 0.000496890377255179 0.000421049298623155 9.32536453701075e-08 3.14007730311632e-05 1.18311655093078e-05 1.14384800544214e-11 0.000244810126135475 4.44279113931929e-11 4.04692633100782e-06 8.69784248997593e-08 6.4531046171267e-11 2.89538828065775e-09 3.50156699301469e-11 2.38956024398579e-07 2.16680019819311e-08 8.00513125552242e-05 0.00115199531050207 8.68046633540195e-06 3.66880356571612e-05 0.000288914854839451 0.000230188470054356 0.00028147763809275 0.000215591147422106 3.77150751644846e-05 9.8862866026672e-05 0.000275802156096355 8.51966348945558e-11 5.18334445013284e-06 1.96235412571573e-05 NM_001034655.1 SIGMAR1 Bos taurus sigma non-opioid intracellular receptor 1 (SIGMAR1), 0.0 2021 99.91 0.477040816326531 NM_005866.3 SIGMAR1 Homo sapiens sigma non-opioid intracellular receptor 1 (SIGMAR1), 0.0 973 76.98 0.476190476190476 TCONS_00228250_1 sp|Q58DH7|SGMR1_BOVIN SGMR1_BOVIN Sigma non-opioid intracellular receptor 1; 7e-72 219 98.15 0.685897435897436 1 coding 0 0 1 1 0.170865933572943 0.177929216951442 -0.0386532918591026 0.527687990491143 CCACGGCAGTGGCGGGGGAACGGGTAGTGGACCGCGCGCCGCAGACTCGGAGGCAGAAAGAGTCACAGCCTCCCGCCTCGGCAATCCCTAGCGCTGCACTGTGCCAGGCCACCCACTGGGATGTGTTGGGCCGTGGGCCGGCGGTGGGCGTGGGCCGCGCTGCTCCTGGCGGTCGCGGCAGTGCTGGCCCAGGTGGTCTGGCTCTGGCTGGGAACTCAGAGCTTCGTCTTCCAGCACGAAGAGATCGCGCAGCTGGCTCGGCAGTACGCGGGGCGCTACTGGGCTGAGATCTCGGATACCATCATCTCTGGCACCTTCCACCAGTGGAGAGAGGGTACTACTAAAAGTGAGGTCTTCTACCCAGGGGAGACAGTGGTGCACGGACCTGGTGAGGCAACGGCTGTGGAGTGGGGGCCAAACACATGGATGGTGGAGTATGGCCGGGGTGTCATCCCCTCTACCCTGGGCTTCGCACTGGCTGACACTGTCTTCAGCACCCAGGACTTCCTCACCCTCTTCTACACTCTTCGAGCCTATGCCCGGGGCCTCCGGCTGGAACTCACCACCTACCTCTTCGGCCAGGATGCCTGACCAGCCAGGCCTGAAGGAGGACCTGTGGATGGACAGGAGCGGGCAGGCCCGCACACATCCACTTGCTGGAGCCCATGTGAACAGACAAGAACATACCACATGCAGATACTGAGTTCCTGATGTATGAGCAGGGACATACATGCTTATACAACCAAACATAGAGAGTCATGGGAACACATGAGACACACATTCAGATACTGAATCCTGTGTGTACGGCAGCATTCACACCCATCCAGAGAGGGAGCCCCACATGTACCAAGGGAGCCAGTCATGTTCCAACACACATCCCACAGATTAACTCAGGCCTCTCCAGAACCTCTCTGCCCCTAGTCAGAGCTCTGGAGTTAGGGATGGGGGTGGCTATTTCAAACTGCCTGGGTCTGACCCTTCAGCCCAGCAGCCATTGATTAGGGGGGATGGGGGAGAAGAGGGGCTGCCTTTGGAGGCTCCCTTCACCTGCAGCTATGATTCCCTTCCCCTTCATTTCCCATCCTCACCATATGCCTTACCCCTTTTTGTTCCCCTGCTATGCAAGTACCTTCATGGTCTGTCCCCTACCCTCTGGAGAACGGAAAATGCTGAGGTCACACCTCCCTCCAGGGTATGATGGGGAAGCTGGCCTCAGCCCAGGGCCCACTGCTGGGACTAGTACCTGGACAGGTGGGCCCAGGTTCAAGGGGCCGTCGATGGCCTAGAGAAAGCCTTTTCTGCGCACACACCCATCACAGCTTCTGGACACTGCCCTTGCTGCATTCTCTGTCCATCTGTCTATCTCTGTTAATAAAGACCTATTGAACAATTTCATTTCTTTTTGTGTCTGAGCAGCAGGAAAACCTCTAACTCCTGGAGGCCTCAAGAAGGTCTCTCCCTCACTGTGTGATTCAGTTTATGACAGCGGCTTTTTACTCAATACTTCAGTGTTCCCAGTAATCACCCGCAGGCTCATTGACTCTATAGATGATTATGCCCAATCCCCAGAGATCAGTTCTGGGTTGAGGCCTTGAGATCAGCATGTTTAATAAGTTTCTCTCCACCAAGGTTGAAGGCCACAGTTCAAGAAATTCAAGGCTAACTGAGGTGTGTGTCTTCCTCTTGGTGTCTTGGTCTTCCCTCTGCTAGTGCTGTTCTGGGAACAGTCCTGGGATTCCTACTCTGAATGATCACTGGGTGGCAGTGTGCAGCCACTTTTGAGCTGTAAGGCAGCGTCATTCTCCATCTGCTTTGTACTAGGTTTCCAGGGTAGCATGTTCACCTCCACCCAGAGCAAGAGTTCTCCTCTCCAGTCTGCTTTTTCCAGGACCCCTTACTTCAGTGGAGGCTCCCAGGAGTGGGCAGCAGGCACACTGTCTGGTGATGTCTGAGGTAGTGAGGGCTGGGACTAGGGTGAGATCAGAGAGGTGCCTGAAGTGAACACTCCCACAGGCCCTGCACTTGCCTCACCCTCCTACCTTGCTCTGAGGTTAAGCAAGGCTCATGCCTCATTTCTTAGCACTCTAATATATTTAAAATGGAAGAAACATGGTTATAAAAAAAGTCTTATACTAAAAATTTGACATTCTAATGAACAAAAATACAAAAGACTACATATATAACCATTGAGAACATCAAAAGTCTAAATTGGTCACAGAGAATGCATGTGAGGCCCAGGCAAGGTGGCCTCCTGAGAGTCCACCACCACCGTGTCAGCCACACCAGGCCCTGGCTGCAGCCTCTCCGTTTGGTCACAGGTTGCAAAGTCAAGCCTCAAAATTTCTCTCACCC EMBV3_16456 GTCTCGTTTCCTGGAACTGAAAGGTTGGGATATTAACTTGTTTTTGCACTTTAGAATAGC Gene GeneID:538793|ZNF238:NM_001078016:83_cdna Constitutive 2 NULL GeneID:538793 16 GENE ZNF238 MGC142551 zinc finger protein 238 EMBV3_08421 TTCCCAAGGAGGGTCAGATGGAGTGGGTGGAAGGGGCCATGTCATCTAAAACACTGAAGA Gene GeneID:282518|SERPINA7:NM_174668:2_cdna Constitutive 1 NULL GeneID:282518 X GENE SERPINA7 NULL serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 EMBV3_40164 ATTCCAGGGACACACGAATGAGGTCAACGCTATCAAATGGGATCCGTCTGGCATGTTGCT Gene GeneID:515972|TBL1X:NM_001145232:11_cdna Constitutive 0 NULL GeneID:515972 X GENE TBL1X NULL transducin (beta)-like 1X-linked EMBV3_35274 GATGGCAGTGAAGAGCATGATGATGGAGGATGCAGAATCACTGATGACAGCCCTGAGAGT Gene GeneID:614311|CCDC76:XM_002686170:328_cdna UTR3_Alt 2 NULL GeneID:614311 3 GENE CCDC76 MGC137577 coiled-coil domain containing 76 EMBV3_02540 TACCAGCCACGGAAAGCATTGTGGAAATAGTAAAACAGGAGGTGTTACCGCTGACTCTTG Gene GeneID:534618|EIF4G3:NM_001078002:227_cdna Constitutive 0 NULL GeneID:534618 2 GENE EIF4G3 NULL eukaryotic translation initiation factor 4 gamma, 3 EMBV3_30842 TCCTATCCAGAGAGTCTCCTGGGCCAGCTCCCTGAGAGCATGCGGTCCCGTCCACACCAA Gene BVV0102_250623 + 0 NULL GK000018.2:62431738-62435431 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24123 GTGTCTCTCAGAAATGGCAGCAGTAGGGGAAGAGTAATTTGGTACTCAACTGTAGGCCTC Gene GeneID:515109|TIMM8A:NM_001034480:14_cdna Constitutive 0 NULL GeneID:515109 X GENE TIMM8A MGC128323 translocase of inner mitochondrial membrane 8 homolog A (yeast) EMBV3_05743 CCAAGGCACGCGCTGGACTCCTGATGGGGTGAAACCTTCTACTGGCTTCTGAAAAATTTA Gene GeneID:535644|SEMA3E:XR_083651:48_cdna Constitutive 0 NULL GeneID:535644 4 PSEUDO SEMA3E NULL similar to KIAA0331 EMBV3_05796 TGAACAAACAGCAGAGACGAAGTGACCTCGATCGTTTTTGGCTAGAGACACTGCTGTGCC Gene GeneID:281751|EIF4E:NM_174310:2_cdna UTR3_Alt 2 NULL GeneID:281751 6 GENE EIF4E MGC134278 eukaryotic translation initiation factor 4E EMBV3_15665 TGCATACTTCCTCAGCTGGGCTCCCTACAACCTGATCCTGTTCCTGCAGACACTGTTGAA Gene GeneID:617880|XCR1:XM_002697097:210_cdna Constitutive 0 NULL GeneID:617880 22 GENE XCR1 NULL chemokine (C motif) receptor 1 EMBV3_17417 GGAGGCAAGAAGGGACCCAAGACCTTTGCCAGCGTAGAACCTTCAGCCAGGAGAATTTTT Gene BVV0102_036531 + 0 NULL GK000007.2:56350497-56948984 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221389 1 XLOC_134704 NonCoding TCONS_00221389 XLOC_134704 NonCoding NonCoding - 7:56352135-56352879 - TSS165387 744 1 0 0.000237733810226832 0 0.00013681987590466 0 3.98158966891251e-05 4.80787352147221e-06 0 0 0 0 0 0 5.39918394866195e-05 1.26451719160973e-05 0 0 0 0 0 0 9.79270414517174e-05 0 0 0 0.000223499214009568 0 7.08768025165888e-05 0 0 0 XM_005268424.1 NR3C1 PREDICTED: Homo sapiens nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) (NR3C1), transcript variant X6, 6e-34 149 90.65 0.14247311827957 0 noncoding 0 0 0 0 GGGTTTGGGGAGGTAACTTTTGCGCCCCTACAGGTGACATCGCTTGCCTGCTGCTGCCAGGGGCGGAGGCTGCGGCAGCTCCACCTAGCCCTGCCCGGGCGCTCGGCTGCAGCTACTCTTTCCCCCAGCTGCACCCAGACTGGCAGCGGCTGCTCTGCCCTGACATTTGCAGAGGATTGGGTAAGCGCGTGCCGGAAACCTCCCGTCGCCATCTTGGTAAAGGCAGCTGACGCCGCTTGGCTGCGCGTCCACCATCTTGGCCGAGGTTCTCATTACCCGGCAGCCGAAGTCGCTCGCATTTGGTTCAGAGGTGGTGGACGCTGCCCCGTGTGTTGTCCAAGGATGACATGGGAGAACTAGGCTATTAGCAAGCCACCTGTGCGGAGGCGATCTGCACTGGCCGCCTCCAGATGATGCCAGGGCCACCATCTTGGCAAAGGAAAAGACGCTCACCGCCGGAGGCAAGAAGGGACCCAAGACCTTTGCCAGCGTAGAACCTTCAGCCAGGAGAATTTTTATGAAGAGCACTGAGCAACCCAGTTGCTAACAAAACCCCTTCTGTTAGCAACACCTCTTCTGATCCGGAAGAAATGACTTCTCTTTTCTTTTCCTTGTCAGTAGTCAACTGGAGGGAAGCCCTACTCTTGGGTGCTCACCGTGGCCTCTAAATGAGAATTGACTCCTAGCATGCTACTTTGCCTACTTTCCAGGCTTCTTACCTTCTAAGTTTCAAATACCAGAATC TCONS_00217232 . 5' 1640 TCONS_00217232 . 5' 1640 EMBV3_06877 CTCAACTCCACCACAATGAGTTCACCAAAGAGGGTGGCAACAAAGTCCAGGAGGGAATGC Gene GeneID:100126053|LOC100126053:NM_001105655:2_cdna Constitutive 0 NULL GeneID:100126053 X GENE LOC100126053 MGC152322 hypothetical LOC100126053 EMBV3_36547 CCAGTCTTGGCATCTTCGAAGTAAGGAGAGGAAATCATCGAGTTCCCCATCCTGAAGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07207 CAACTTCAGAATGTACAAAGGCAGCATGAGAAACCTAGCTGGCGTGAGGGCTCCTGAATG Gene BVT0102_050955 + 0 NULL GK000021.2:52095085-52763412 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119709 1 XLOC_072950 Coding TCONS_00119709 XLOC_072950 NonCoding Coding - 21:52692326-52694579 - TSS89576 2253 3 TCONS_00119709_3 71 0.0741233910341766 1 0 0.000122797324613833 0.000257393952049498 1.35707878474132e-05 3.55842409504241e-05 1.47982232095882e-05 5.15604465267396e-06 2.74925010607909e-05 0.000105650048766211 0.000178262065140607 0 0 0 2.30069267289848e-05 1.67030267718267e-05 4.76409836444485e-06 0 0 0 0.000207574509794633 0.000418068802490062 4.39726941360626e-05 0 0 0 0.000302374861776904 0.000134856967163853 2.84068055795081e-05 0 0 0 NM_001034363.1 RBM3 Bos taurus RNA binding motif (RNP1, RRM) protein 3 (RBM3), mRNA. 5e-47 194 89.80 0.0648024855747892 0 noncoding 0 0 0 0 -0.0961192708666142 0.394765236580756 -0.0107425352735448 0.821753171772973 TTCTATGAAAACTAAAGCACGACATGGGTTTATTAATTCTATTTCCCTGGTACTCAGAGTGGTACACATATTGCTTATATCTTCATTTATAAAACAAGTTGTTCCTTAACATTTTGTGTTGACACCTATAAGAATAGTCAGGAAGAAAACAGCTCTAAATAACTGGTCAGTGGAAAGCTTGGAGAGCTGCAAATGCTATCCAGTGCATCCCACTTATGAGGGTGATACTGCCCGAAATGACCTTGCAGAAGACGATTTGGAAGCACTTGAAATCTGCTTCAACAGCAGATCTGATCGTTGTGGTTTTATTTATTTTTTTCCAGAGCTTAGCAGTGGGACACAAGAGTGTTTGCTGCAGTAGTGAAAAATCAATATGATTACCTCTTTGCCACAGGGCTACATCTAACTACAATATCCTGGACACCACATATCAGCATCACTCACGGTTAATGCTGCATTGCAGATGGAAGCTGAATGAGAACAAATAGCAGTGACATTTCTACCCTCGAAAAAGTTGCTGCTGCTGCTGCTGCTGCTACTAACTCACTTCAGTCGTGTCTGACTCTTCGCGACCCCATGGACTGCAGCCTACCAGGCTTCTCCATCCATGGGAGTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTGCCTTCTCCATCGAAAAAGTTACACATGGCATTAAGATTTGACACAGATTGCATTAAAATGAAGGAAATGGTTGTCTTTGTGGTATGAAATTAGAAACTGACTTGTTATTGCTGCTTTTGAGATCAGATTGAGTATCTTTGACCAAAAATGGGAGGCCCAGCTTACATGAGAATTGATATCACAAATATTTTTATGATTTTCTGTCACATTGCTAAAAAAGAAATCAACTCACTTCATCTTGCTTATATATTTAGTGAAAAATACCTTTTCATTGAAATAGCATTTAAGATAAAATTGAAATATTAGCATCATCCTTCAGCATGTTAAAACTGGTGATGTGTTCTTGATGTTCATCTACAATGATTTTGGTAAAATGCTGCAAAGGAAAGAAACTTTTAATTAAAGCAATTTAAGGGTTTATTTGCCATTATAAATAACATTTATATTTCCATGTAAAACCAGAGGTTAGAAGTAGTCACGTGTTTATCATCCACATTTCTACTCTCATATTTTCTGTATATATGATGCTTGAAAATATATTTCCTAGTTAATAACTTATTTTTAAAATAAATAAATATCAGGATTTATTAGTGGCTAAAGACAGAATAGTAAAGCTGTAATTGATTTCTCCGTTCACAGTTGTGTCAAGCATCATTTCTGTATTCTGCTAGGGAAATGGAATAGCTACACCCCAATAAATTGTTGAAAGTAAATTTATACATATGAACACCATTAACTAACAAATAAAATGTAGTGCGCGCTTCACTTTTAGTGCACTGTTATACTGACTCAGCTGCTCTACAAGCTTTGATATAAATAGCAGATAACAGCCCTCTGACTCGGAGACATTAGCCTCCATCACAAGTGGTGACTTGCTTTTAGCGATTTGGACTGTGGTTCAGACTGTTCTGTGTATAAAGCTACTTAGAAATTATGTGACAGATTCAGGCCAGAATTCAGAGCCCAAATGGAAAACTGTAAATCTGTAGGCTTAACATTCTAAACAAAATATATGACTCAGAGCAGGTGGCTATGCATAATTACAGAACCCTGTCTTAAGCTTTTAAAAATATTTATTCACCTAAGATATTAAATTGTAGTAAAATAATGAAATTATTCAGTGGAAAAAAATGTGAAGCTCTTCTGCTTCAAAATATGTGCTTGTGTGTTAATATTTATTCAATTAATAACAGTATTTCACCACAAACAGGTAGAAATTTTATATCCTCTCATAAATGAGGTTTGGGCATCGATAGATTCAGCTATTTTAGAAAGACCAGGGTAATGACGCAAGCTGGTATGAATTAAATTCAACTTCAGAATGTACAAAGGCAGCATGAGAAACCTAGCTGGCGTGAGGGCTCCTGAATGTGAGTTTCACTCCAGTGTCAGGAATGAATTAGGACCAGAGGAAGGTGGAGAGGAAGAACAAAGGATGGGCTTTTCTGTTTGAATGTACTGCACCCTGCCATTTCATGTTGAGTGGGAATAAGATTGATAAGACGCATCTGGCCCAGATGAGGTGATTTCACAGTGGGAAATCTTAAAATAAAATATTTTCCACTGAATAAGATGTTTTCCACTTTTATGATACTAATGCTTTC TCONS_00119694 TCONS_00119695 TCONS_00119696 s 3' 597243 TCONS_00119694 TCONS_00119695 TCONS_00119696 s 3' 597243 EMBV3_39282 AACATGCTAGTTGGAAATAAAATTGATAAGAGGCAAGTGCAAAAACCTGTGATGGTGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01101 CATATGGGAAGGCTCACGCGAGGGAGAAATGTCGTGAATCTAGTGAATGTGGACAGTCTC Gene BVT0102_106296 + 0 NULL GK000018.2:64673378-64691261 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22464 ACTGGCCCCAGGAGAACATCAGTGGGGTCTTCAACAAGTCCTGTGCCATCAGCTACACTA Gene GeneID:615906|LSS:NM_001046564:78_cdna Constitutive 0 NULL GeneID:615906 1 GENE LSS NULL lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) EMBV3_03242 CGCGCCCGGCGCCTGGCGCTGACCTGCACGATTTCTGCGCAGTATCCAGTTGTGGACCAT Variant GeneID:281480|SDHA:NM_174178:11_cdna 75^164 1 EMBV3_32609 GeneID:281480 20 GENE SDHA MGC127962 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) EMBV3_22851 GCTCTGCAACTTTTCTATCTGAGCGCCTCCATCAACCCCATCCTCTACAACCTCATTTCC Gene GeneID:788867|LOC788867:XM_002691834:536_cdna Constitutive 0 NULL GeneID:788867 12 GENE LOC788867 NULL similar to Motilin receptor (G-protein coupled receptor 38) EMBV3_17464 GTGGAAAAACCTTCACCTGGAAGTCACGCCTCTCTATCCATCAGAAATCTCATACTGGAG Gene GeneID:531674|LOC531674:XM_002700087:188_cdna Constitutive 0 NULL GeneID:531674 X GENE LOC531674 NULL similar to Zinc finger protein 41 EMBV3_42018 TGGCCAAGGTGCAGGGTGGAGGTCAGTGGATGAAAAATTACTAAGAGGAAACCTCAGGGG Gene BVT0102_198782 - 1 EMBV3_29168 GK000007.2:40576683-40583482 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220475 1 XLOC_133792 NonCoding TCONS_00220475 XLOC_133792 NonCoding NonCoding - 7:40578762-40580321 - TSS164473 1559 1 TCONS_00220475_1 88 0.391276459268762 1 0 0 0 5.34226681414871e-05 0 0.000104507383248268 6.8833640003309e-05 2.24440902944648e-05 7.58783668269306e-06 4.55492135121667e-05 0 0 7.64525385680209e-07 3.68092618324183e-06 0 6.29405383395629e-06 0.000220237541007845 0 0 0 0 0 4.7598953224956e-06 0 0.000473152056721554 0.000168878752627951 0 7.5165559835301e-06 1.84833392167561e-05 0 0 XM_005209176.1 N4BP3 PREDICTED: Bos taurus NEDD4 binding protein 3 (N4BP3), transcript 0.0 2812 100.00 0.999358563181527 NM_015111.1 N4BP3 Homo sapiens NEDD4 binding protein 3 (N4BP3), mRNA. 2e-19 102 70.18 0.172546504169339 0 noncoding 0 0 0 0 -0.00909303004813556 0.930678647086624 0.00357963580596232 0.961715741602746 CTCCCTGCACTTGTCTCCCTGCCTTTGGTCCCTCTTGTTCTCAACTCGATAGTGTGTGTCCTCCAGTGGCTCCTTGGGTCCCTTAGCCTATCACTTGAGGCTTCTGACAGTCTTGCCTCCAGGGTCACTGATGGTGGTACCCCTCCTAATCCCAACAGCCCTCTGGGCCCTTGTTCTCCAGGCAGACTCCCCCCGACCATGATGCTCAGATTTTCCCTCCTTAGGGAAGCCTTCCCTGAACTCACACCCTGTCCAGGCAATTCCTTGCTCCCTATGCCCGCAGCCCCTGTTTCCCTCCACCAGCTCTGTCTGTTCCTTTGGAATGGTCAGTTTGCCTCTGTTTTCCACTGGGCTGTGGACATGGCTGGAGCAGGGCCACATCTTCTGTTTTCATCCCCAGAGCCTGCTGTGGTTCCAGCCCAGAAAGCAATGTGGGGGGGGGTGGCTTTGGAGTCGAGAGACTAGACCCCTTCCCTGACTGGCATGGGTTCAAGCTAGAGGTGGTAGGGGGAGGTGGCAAAGGCTCAAATGCCAAGCGTTCATTCACCTTTTGTGCCACCTGGTCAAACCAGGTCTGTGCCAAGCACCACCATTCACTGCACAGTGAAGCATTGAGTGCCTCCTTCGGGGAGGAAGCTGAGGTGGTCAAGGCCTTTGCCCCTGTGGTCCTTTCCAGCGGGTGAGGGAAAGAGACAACACATACGGGTCCATAGTAGTGACTGGGCCAGAAGAGTGCCAGCATTTCAGAGGTGGGGACAGCAAAGGCACCTGCACAGTGGTGAGCAAGCCAGCAGAGCACGCAGAAGGCAGAGGGAGTCCATCTGGGGGACTGAGAGTAGATTTCTTTGAAACTGGTTGGCTGTGGGTATTAGGGAAACATTTCCCAAAGAGGGTATAGACCCTACAGTGACTATTCAGATTGCAATAATCCACCATTCTAGTAGGTGGGGGCTTAGCCGTCTATATTGGGTTCAGAAAAAAATAACGTGCTATTTCTTGTAGAAAAAAACAAAAAATATGAAATAATGCAGTAAAAACAAAAAGTGAAATATGTTATGAGAGGTGAAGTTTGAACGACAGGAGTTCAGAGGAGAACTGGCTCACTTATCACTCCAGGTGGTGGGGTGGGGCGAGGGGACAAAGGTTGACCAAACTCTGGGCAGGCACTTCCAAGCTTTCTGACTGCACCTTCTGACTGTGTGCTTCCTTGTGCAGCCAGTTCTAGCAAGAATCCTGCTAAGTTAGGTTAGCCAGAGTCTCCCATCTTCTATGTCTGAACACCCTCCGTATTCTAATCTGGTTCCTCCACCTGCAGCATCTCCCACATTATGTCTGGCCACTCTGGCCTGCCTTCATTGAGAATTCTCTGCAGTCATTTAGCCAGTTCCCCCTGCCCCCTGAGGTTTCCTCTTAGTAATTTTTCATCCACTGACCTCCACCCTGCACCTTGGCCATGAAATATACTTTTCCTTGTATTTGGAATTGAGGCCACTCTCTGACCCTTACATAAAATCCCATTCCAGTAGCCTCCACTGAATAAAGTCTTCCTTACCACTCTA TCONS_00212938 . 3' 1028 TCONS_00212938 . 3' 2586 EMBV3_02739 TTCGGAACCTGTTTGTGTACCACGAGAATGGGAAGGAGATAGTGGACTGGTTCAACGCTC Gene GeneID:534106|ADAP2:XM_002695659:130_cdna Constitutive 0 NULL GeneID:534106 19 GENE ADAP2 CENTA2 ArfGAP with dual PH domains 2 EMBV3_21691 AGTGTTTAAAGCTGGGAGGATCCCTGGGCCTGAACCGTCTCCAAGCACATGCGCCATCAT Gene BVT0101_018105 + 0 NULL GK000019.2:45295628-45350721 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097293 TCONS_00097294 1 XLOC_058212 Coding TCONS_00097294 XLOC_058212 Coding Coding DCAKD 19:45347357-45367655 j TSS72121 1926 1 TCONS_00097294_2 231 0.200415368639668 5 0.905355471251909 0.00371551814154536 0.00306821950553466 0.00465101273797655 0.00235411248493664 0.000871545617115781 0.00106326982086929 0.000597452106351526 0.00142443616417678 0.00217422665899449 0.000250059364610289 2.21762289717456e-05 1.3545503597186e-09 0.000123072565125493 0.000275515947845517 3.34524491653218e-06 0.00270146990824976 0.00169931450461709 0.00104219287268701 0.00105450976284073 0.00281934649534843 0.000169077459624835 0.00139234250148973 0.000280859525483674 0.000550233729082821 0.0023602754744987 0.00171449015652294 0.00183958316436087 0.000861257469535741 0.00016707940381304 2.33418020209643e-09 XM_005220835.1 DCAKD PREDICTED: Bos taurus dephospho-CoA kinase domain containing (DCAKD), transcript variant X4, mRNA. 0.0 3369 100.00 0.969366562824507 NM_001128631.1 DCAKD Homo sapiens dephospho-CoA kinase domain containing (DCAKD), 0.0 991 83.37 0.491692627206646 TCONS_00097294_2 sp|Q3ZBS0|DCAKD_BOVIN DCAKD_BOVIN Dephospho-CoA kinase domain-containing protein; 4e-170 473 100.00 0.995670995670996 1 coding 0 0 0 0 -0.131247728107711 0.378365343809637 0.0152498010822633 0.747240760593917 GTCGCCGGCCCCGCCCACCTTCAGCTGGCCGGACGTCCGGTCCACGTGCGCGCGCTCCCGAGGCCCCGCCTGTCTTCAGAGAGCCACCCAGTAAGCGCCTCTGAGATTGGGCGAGCGGCGGCGGCCAAGCCGGGTCAGAGTCCCAGGGTCCTTCCGGCGTTCCTGTGGAGGACCCTCACCACTGGGGAGCTTGGCCCCTGTGACTCCAGACTCCTGGTTCTTGGTCTCACCGACCTCCCTCCTTCCTGGGAAGATGTTCCTGGTGGGCCTGACAGGGGGCATCGCTTCAGGCAAGAGCTCAGTGATCCAGGTGTTCCAGCAGCTGGGTTGTGCGGTGATCGATGTGGACATCATTGCCCGGCACATTGTCCAGCCGGGATACCCGGCCCACCGGCGCATTGTGGAGGCCTTTGGCACCGAGGTCCTGCTGGAGAACGGGGACATCGATCGCAAGGTCCTGGGCGACCTGATCTTTAACCAGCCCGACCGGCGGCACCTGCTCAACAGTATCACCCATCCTGAGATCTGCAAGGAAATGATGAAAGAGACCTTCAAGTACTTCCTTCGGGGATACCGCTACGTGATTCTGGACATCCCCCTGCTTTTTGAGACCAAGAAACTGCTCAAGTACATGAAGCACACCGTGGTGGTATACTGTGACCGAGACACGCAGCTGGCCCGGCTGATGCGGCGGAACAACCTGAGCCGTGAGGACGCGGAGGCCCGGATCAAGGCCCAGCTGCCCCTGAAGGACAAGGCCCGCATGGCCCGCCACGTTCTAGACAACTCGGGCGAGTGGAGCGTCACCAAACGCCAGGTGGTCCTCCTGCACGCGGAGCTGGAGCACTCCCTGGAGTACCTGCCACTGCGGCTCGGGGTCCTCACGGGGCTGGCTGGCATTGTCGGTCTGCTCTACCTGCTCACCCACTACCTCCTGCCTTCCCCCTAGCTGGACCCTCCAAGGCAGGAACTGCTGGGTCTCAATCTCCTCAGAGGCTGAAACCAGGTAACAAATGCATCGGGTTTCCTCCCAACCCCTCAACACATGCACTCTGGATCCGGGCTGGAGCCCTGCCCTGGGCCTTCCTTTCCTCTGGGCACATACGGCATGCTCTCCGAGGCAGGGAAACAGCCCTCTGTCAGCAGATGCTCCTTTCCACCTTCCCCAGAGCCCTTCCCTATGGAACCCCCCACAGAATAGTGTCCATGAGAGGCTGTGACAGTAACACTGAGAGACTATTGTTAATTTCTTGTGGGTGGGGGTGAGGAGCGCTCTCAGGGGCTGTCACCAGTGTTTAAAGCTGGGAGGATCCCTGGGCCTGAACCGTCTCCAAGCACATGCGCCATCATGGCCAAAATGTCCTCTTAGTGGACATCGGGGAATCAGTTTGGACCAAAGGCTGCCCCCTTCAAGCAGGATTCCCTCGTAGACTGAAGCCCTCAGCCAGGATACAGTAAGGATTCGCTTATGGGCGATGCTATATCCGGGCAGAGGCCAGGCCTCTTCTGAGATGACCCACCGCCCCCCGTGGTATTTCCCCGGCACTCCCTGCAGCCCACTCCCTGCCCCCTACCACTCTACCTCCCTGAGCTCTTGGTGGTCCACATGCACCTGGATTTTTCTTGCCTCTGTGCCTTTGCCTTGCTGCTCCCCAATCTAAAATAACCCTCCCCCCACCCCCCAACTGGGTACCTTCTAGCTCAGGCACCACCTGAAGCTCCAGGAGGGATTAGGTGCTCTGGGTCACCACCCTGCCACCACTACCATGTTTTACCTGAATCCACAGTATAATAATCAACTAAAAGCTGGTTGGTCTCTCCTAGACTGTAAGCCCTTTGCGGGCAGGAATTGTGTCTTATTCATCTCTGTTCCTGGTGCAGAGCCTGAGTTGCCACTGGTGCTGAATAAAGTGTGTTGATCTGAAA EMBV3_19939 GGTCAGAGGGAGCACCTTTACTTCTTTTGGTGAAGTTGAACCATAATTAGAAGTTTGCAG Gene GeneID:530784|C29H11orf54:NM_001046315:4_cdna Constitutive 1 NULL GeneID:530784 29 GENE C29H11orf54 C11orf54 MGC128152 ester hydrolase C11orf54 homolog EMBV3_08047 TCCCTGATGGTTTTGGCATTGGGTACTCCGTTCAGGACAACTGGATAGGCTGCAACGTCT Gene GeneID:504502|CPT2:NM_001045889:13_cdna Constitutive 0 NULL GeneID:504502 3 GENE CPT2 MGC128592 carnitine palmitoyltransferase 2 EMBV3_36448 CGTTGGCGGGGCAATTAAAACACCAAGTGGGTGCCAACACAGTTAATCACACCTGCACTT Gene BVT0102_006904 - 1 EMBV3_21676 GK000019.2:44609788-44614051 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26299 AGAAATGACCTTTGGTGACCACTGACCCCTGAGGACTCTGCATCCACTTTTGGCTCTCTT Gene BVV0102_161866 - 1 EMBV3_32075 GK000011.2:87307999-87466569 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38444 TTTCAAACTCTAAGACCCAGGCATTTTCATTTACTTTGTGCAAGAACTGAGGTGGAATGC Gene BVT0102_366491 + 0 NULL GK000009.2:88956381-89027669 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26617 GATGTGTGTGGGCTGAAATTCCGAGCTGCGGTTGTGCATGAGAATACACCCTTCGTGGTA Gene GeneID:767937|RBM4:NM_001077010:146_cdna Constitutive 0 NULL GeneID:767937 29 GENE RBM4 MGC128953 RNA binding motif protein 4 EMBV3_18812 CGCTGTGGACCTTTGTCGTGGACACCACTTCAGATGAAACCCGCTGAGACCACACCCAAC Gene BVT0102_004153 - 0 NULL GK000017.2:72453285-72467324 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078236 TCONS_00078238 TCONS_00078234 TCONS_00078237 TCONS_00078235 TCONS_00078239 TCONS_00078240 1 XLOC_047253 Coding TCONS_00078237 XLOC_047253 Coding Coding PRR14L 17:72459516-72504751 j TSS58256 15225 1 TCONS_00078237_11 1964 0.0927422003284072 10 0.663637971437414 0.00103037122012622 0.00123071520281211 0.000702687993287357 0.000515426099680714 0.00078204273555669 6.9130862773927e-05 0.000224974484945622 0.000370788970015164 0.000517893829289862 0.000192117941321107 5.35563382627313e-20 2.52085721225498e-05 2.42577859420427e-14 5.79143042154616e-05 3.56558584625743e-14 0.000125366544740916 1.19506613197194e-05 3.75695032983784e-28 0.000154882548748299 0.000716340713651617 0.000259576942412686 0.000428467474817031 5.97736581139066e-06 0.000145542320733058 0.000307196089283217 8.45851703755714e-05 0.00028567047216287 2.58652597869538e-27 0.000156638931111068 0.000817191296471748 XM_005195124.1 PRR14L PREDICTED: Bos taurus proline rich 14-like (PRR14L), transcript 0.0 1.235e+04 100.00 0.449655172413793 NM_173566.2 PRR14L Homo sapiens proline rich 14-like (PRR14L), mRNA. 0.0 2553 77.05 0.213924466338259 TCONS_00078237_11 sp|Q5THK1|PR14L_HUMAN PR14L_HUMAN Protein PRR14L; 0.0 2101 59.03 0.990835030549898 0 coding 0 0 0 0 0.0639095467719123 0.56291450927437 0.0243925462547322 0.662469597298969 GTGGTGGCCGGAGCGCCCCCGGGCTCTCTCGGCTCGGCTGGCTCAGGTAGATTCGGCGGCTACGGGGTTGCGGCAGCAGAGGCCGGGCTGGAGGGGCGAGCGCGGGCCGCGGAGCAGGCCTCAGGGGTGAACCGTTTGGTGTAAGAGGCTTGACTCCATATCTGCACCTGCCCCCATGCTGTCATCCGGCGTGGAGACCCAGCCCGTTCCACTTGATTCCTCCATGTCTGCTGAGGTGCAGGAATTATACTCTGAACTCCCAGGGAGTGCCTCCAAAGAGCTTCATGCTGACCCCGAGCCGAGTGCAACTCCAGATGTAAAACCCGGAGCCTCAAGCTCTCGTGTAAGTCAGAGTAGGGCTGTGCCCTCGGAGCTGCAGAGGACTCCTGCGGACAGTTGTCGTGAAGAAGCCCCCAAGACCTCGGACCATGGGGGTGAGCCTGGGCAGTGTGGGCTGGTGGACCCCTCAACAGAAGGTCCTGTGGCTCCTGGGAGCCTGGATAGGGAAGCGAAAGCCAAGAGCCTGGAGCAAAAGGTCTTCAGAGATGAAGGGGACCAGGCAGAGGTGGTGAGAGACCCCTGTGAGGGAGCGGAAGAAGACCTGCATCAGTATCCCACAGCTGCTGGAGAACAGCCCCGCCCCGGCCAGGAGGACCTCCGGATGCAGGCAAGTGAAGAACTTTTATGCACGGGCCTCCCTGAAGATGGTCTGAGGAACAAAGGTTTTGCAGTGGTAAAGAACTCTGCCTGCCAATGCAGGAGATGCAAGAGACTCAGGTTTGATCCCTGGCTTGGGAAGATCCCCTGGAGAAGGGAATGGCAAACTGCTCTTGCCTGGAGAATCCCACGGACAGGGGAGCCTGATGGGCTACAGTCCAGGGGGTCGCGAAGAGTCAGACGTGACTGAGCACGTACACATATTTGCTCCTCAAAACAATGAAGGAAATGTACAAATCACAGCTGAAACTCTTCTGACATCTACTGAGGAAGTCCAAGTTATGAAGGTCCATGGAACTAAGGTGGACGATAACAAAGGACTCGAGAATGGCCGTGTGAGTCAGGGTCTCTTGGCTGGGTGTCGTGGACACTCAGAGACAGACGAAATCATGACCAGTGCTGAGGTTTCAGAGTCCAGCACCTTAGTTTCTCTAGAGCCTTTAAACATTGTGGACCCTGGATTAACAGAAGCAAATCCAAAAGAAAAAGAATGTGAAGAAATAAGAACTTATCCTTCTTGGTTGTCATTGTTACCAGGGAACAGTGCTGTTTCCAAAGTGGACAGCAGGGAGGAAGAGTTACGTAAATTAAACCTCGTCTGTGAAGCCGATGACAATCACCAACAGGTCCCTGGGCACCACAGTGAGAGACACAGTTCTGCACATGACAGTCCCAAAGCCACGAGAAAGGTGGTTATAACAGAACCCTCAGAAGAAAATTCTAAAGTTTCCCATTTCACATCAGGTTTATCTGGTCCAGGATCCAGAACAACATCCTCAGAAAAGCGTGGTCTTGAAGGTGATGGCTTGCCAAAGGGATCTGCTGGAAAGACGCACAGTTCCTGTTTGGATGGGAATGGTCAAAGCCAGAACTTGTCTTCTAGAGAAGAACACAAACAGCCTTTGAACCCTAGAAGTGAAAGAGAACTCTTCCTTGTTAACACCAGGCAACCAGGAGAGAATTCTAGTCGCCACTGTTCTGGAAAAAAAGAGACTACTGTCTTCCCCAAAGAAAATGCCCACGATCACTACTGCCCTCGAGGCAGTCCCCATATAGGCTGCTCCAATTCCTTCCTACCCAGTTCTTTTACTAAAGCCATGGAAGGAATGCTTGAAAAAAATGATTTGAAAATCACTTTAGATGTTCACGGTAGCTTGGCAAACAATGAGGACCACAGAGGAACTTTTGCTGAAATGAGCCAACCAGGCACAGACTCTGAAGGGAGTCATTTTCCCTCCTCGGTGCAGATTGAAGAACCAGAACAGACAACTACCCTGGAGCCCAGTGTGCTGACTGAGAAGACTCACAGTAGAGACTGTGACTCCTTAGTCCGTACCCAGAGAAATCTAGAAGGCAGACCCCAGTTAAACCAAGCCTCACCTAATGGATTTTTAATTGAAGGGAAATCCCTTGTGAGTTTAACGCCAGAGGACCAGATAAATTCTATAAATGAGATGTCTAAGCCCAAGAAAGACATTACTCCATTGCCACCATCCCTAGAACTTGATGACAGGCCTGAGTCAGAAATAGCCATACAAAATGCCCAGGACCATGGTCCACATTTAGGTAAACAGAGCGCTGCCTGGGAGGTGAATAAATTTCCTCATGACAACAAACTGGTTGTAAACAAAACAGGAAGTGAATGTGTTTTAAATCAAGTGTCCCTTAATTCTGAAACCCACACAAAGTTGCCAAGCGACAAAGAGATGCCTGTGGCAGTGAGCGGGGGTTCCCGCCAGAGCCAGCGCCCTCCATCAGAGGATGGCACAGCTGTCACTGCCGGAACCCACCCCATTCCTGTGAAAACAAAGACGGAAGACATCTCTCCACCAAGTGACAGAACCTGTGGTGCCTCTTCAAACAGCAGATCAGAACGCCTAGAAAGAAAGACCGAAGCAGCTAACTCGGGAGTAGGTAGTCTGCATTCTGGACTTCCCTCAGATAAGAGCAAAGTGGCAGCCTTGCCTGTAGAGGTCTCAGTCCGGGAACGTCAGAGCGTTCCGTCTCAGGATCTCTCTAGCTGCCCTTGTGTGAAGAAAAACGTCCCAGAGGAGAGCAGGTGTGCTGCCCTGGAGCCCAGCAGAACGACCCTGGGCGTTGAGAACTGTCTGTTAACCAAGTATGAAGATACCTTTCAGCATATCGATCACCACTCCCAAGGGAGAGACAGCTCTGTGGAAAGCTGCAGCTGTAGAAAGAATTGTGCATCGGAGGAAAGTGAGCCAGGTGAGGGAGAAACTGAAGGCAGCCTTCCTGGAGGTGAGGCCAGAGATGAAATGATGGCAGGCACGTTAAACAGTGAAGCTCCAGACCAAACCACCCGACCATGCAAGGAAGGGCCAGAGGAAAAAGAACAGGACACACCCAAAGAGACTGTGTTCTGTCAACGTGATGTTTCTGCTCGTGTCGCACAAGAATTAAACCAACCCACAAACATTCCAAGTCCTGAAAAACTGTTTGGCCAGTTTCCTCCCATAATGTTCTCCGGTGTTAAGAACGTGAACCAAGCAGCTGAAACTCCCAAGCAGAAGGCAGATGACGCCCTCGGCTCCCAGGGTAACCCAGGCGGACCCAATGAATGCAGAGGTGAAGGTAACCCAGCTGAGGAGACGCTCGGCCGTGACCAGTGCAAGTCGCCCACAGAGCCTGACAGAGAGGCGAGCCACAGCCTGAAGGCTCCACCCGTTGGTTCAGGCAGTAACAGTTCAGCATCTGGCAGGAGCCCCAAGAAAGGGGGCTGTGGGAGGACTTCTGATTGTGCGGAGCCCACAGATGGGACAGCACATGTGGTCTCCACAGGCTGTAGTGATGAGCCCACAGAAGGCATTCTGGATGGAAGGGTTTCTGGTACTCTCACTGGGGGTGCAAGGCACGCCAGGGCAACGTCGCTGGAAGCCTCAGCGAGTACGCTGTCCCAGAGGGGAGCGCCTGTCGCTGCATTTATAGGAGTGATTGACCAGGAGTCGGATTTTCAAGATGCTGCTTCTTCTACATCAGACTCTCTCAATATTAAAAAATCATGTGAAGAGAAAGTATGGAGACCGGTAGAAGACTGTGAAATGGAAGTGTGTCCAGGCCCTTGTGTGCCTGACACGGGGTCTGTTGCAGATCATGAACCAGATGTAAGAGTATTGGGTAAAATAAATATGTCTTTAAATTACATTCATCATGAAGAGCAAGTTAAAGAAGCATCCCTGAGAGAAACACAAGGAACAATTGAAGGATCAAGACTAGAAATAAATCCTGAGCAAGACAAAGAAAATACCATTGGAATTTCTTCAGTAGAGTTGACATCTTCTGGACACCACGATGTAAACTCTGTCCCCTCGAGAAGCCCGAAATCCACTGAGATAATGCCTTTGCACCCATTGTCTCAAAAAAAATCAGAAACAATTATTAATAGTGAAGAAACTGACCCCCAAAACCTTTTTAAGCCAATAGACGGTGAAATGCCTTGTGAGAATAAGAACACCACAGTCCTGCCTGAGATGGAAGGAGGAGCACCAAGGAGTGAGAGTGAGCCTAGCAAAGAGAGCAGCACAGCCATTAGGGCGGAGAGCTCGCCTTTGATGCTAGATGCAGAAACTAATGTGAAAGGAGAAGACACTGCAGAGCAGCAGAGCGGGCCGTGGGGTCAGTTTCCTGCCGGGCAGGAGTCGCAAGAGATGGCAATCAGGGAAGGCGGTCTCGCTGATGTCCCAAGCCAGGCATCTCAGACCCACCTTAGAGCTCCGAGGGTGCCGGCTGACTCGGAGAGACGCCCAAGCCAGAAGGTTCTGAGCCACAAGGAAGAGGAGCAGGCACGCCAGAAAGAAGCACACACAGTGTTGGGACAGTGCACAACATCTCATACGTTGTCAGATGAGGGGCAGAGTCAGAGCCCACCTCAGGGTGGCGAAAATGAGCCCGCCTCAGAAACGGAAGTCACCTCAGCAAAGCCGGCCACGGGCGCCTCTGCCGTGGGGCCTCAGAAGCCCATTGACGTGGAGGAGGAAAGCTCGTGTCACCCGCTGAGAAAGGACACAGAGTCATGCACATGCCCCGGCCCCCGCACTGCCCCTCGGCGTGCTCAAGACCCCAGCTCCACGGGGCGGGAGGCCTTCCACGGTGCCTTTGGGAACACTTCTCACAGGAAGGGGGCGCTGCCCTTAAAGAAGCAGCCCCCCCGAACCTGCAAGAAAGTCTCCTGCCAGGAGCTGGTCTCCGTAGGGAGGAAAAGGAGTAGAATTGCACATTCTGCTTTCCTAAAGAGTTCCTCTGAGACCATCCCCACAAAAGCACACAGGTTTCTCACTTCCCGTGCCATGTCTGTACCTGCGTGCCCAGAGCCCGAAACAGCCCCTGCCAGAAGCCTTGTGAGCCACGTACCAAAGCTGAAGGCTGCCCCGGGCCCACCCTCGGGGGGCCTGAATGTGCGGATGCCTACCAAAGAATTGGCCTTACTCAGCAAGCTGTCTATCCTCGCCTCCAGACTGGTCCCCGCTGCCAGGACCCAGAAGCTGCGGTCCCGGCGGTGCTCCTCGGACCTTCTCCCCGTGGCTAAAAGCTACAAGCAGCTCCGATACCGGAGGCTCCTGGACGGCTTCTCCTGCAGCATGACGCAGCTGAACCCGTGTCTGGCAGCTGGTGACTGGGACAGAAGGCCTAGCAGTAAACCCCTGATGCTTTATTCGCTCGAAACTGTCAAAATGAGCTTCATAGATGTGAGTGACAAGATGCCATCGCTGCTGCTCGGTTCCGAAACCTTCCCGGTATCCTTCCGTGTGAAGCTGGGCCCTGAGCGCGTGGCCGAGTCCCCTAGGACTTTCCCCGAGCACTGTGCGCCCGCGAGACTCGCCTTAGGAGAGGCCCGCTGGGGCCGTTCTCCACCTCCCAAGTGGACCTTCTCCTTCTTCCTGGCCCAAGGCTGCCCTGGAATGGCCACATTCAGGGAAGACCCTGGCCTCTGCAGCCAGGCAGGCGCCCAGCCTCCAGTTCCCCTCCAGGACCGCAGGGCCACCGCCCTAGTCCAGACCAGAGGGGGCTGTTCCGTCCTCGGGCTCCACACGCTCCTAGCACTCTGCTCCCCGGGATGCTACCGGATCTGGACGAAGAAACGGAGCTGCGTCAGCCACACGCCTGCCATGCAGAGGCTCTTCATGACCCAGTTAACACAGGGCCTCAAAGGGCTGCGGTCTCCCGCCTCCATAGCTGACAAGGTCTTCTGCTCCCTGCCCTACTCGGTGGGCCGGGTGCTGTCCATCTGGAGCCAGCATGGGCCTTCCGCCTGCCCCTTGGAGATCTCTGCCCTTCCACCCTCTCACAGCAAGCGGCAGTCACCTCTGGGCGCCATGAGCAGCCGCACCGTGTTACCGTCCATGCCTCTTCCGGGCCTGGAAGCTGCTTACAGTGCCGGCGGCAGTCACATGAGGCTAGAGCCTCCATTCCCTGCCTTGGTACCAAAGTCTCACCTGGTAACAGACTCAGCCGTCAGCAAGCTCCTGTTCTCAGCCTCAGAGTTCCCGGTTCCCGGGTTTGACGAGCTGGACGGTGTGACGGCCGCCTGCCCCCGACCACAGGGCAGCCCTCCAGACCAGAAAGAGGCTGAGCTGGAGAAGAGGCCGAAGAAAGTCTCACAGATTCGCATCCGGAAAACCATTCCTAAGCCAGACCCTAACCTCACGCCCATGGGCCTTCCTCGACCCAAAAGGTTAAAGAAAAAAGAGTTTAGTTTAGAAGAAATATATACCAACAAGAATTATAAATCTCCTCCTGCAAACAGGTGTTTAGAGACCATTTTCGAGGAACCTAAGGAACGAAACGGTACGCTCATCTCCATCAGCCAACAGAAGAGGAAGCGAGTCCTAGAGTTTCAGGATTTCACAGTCCCTCGGAAGAGGCGTGCACGTGGAAAGGTCAAGGTAGCAGGCAGCTTTACACGGGCCCAGAAGGCAGCACTGCAGAGCCGCGAGCTGGACGCACTCTTGATACAGAAACTGATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGGAGCAGGAGCAGTCATCCGGCTGCTGAGTGGCGATTCAGGTTGGGGGTCTCGGCTTCAGACTTTTCTTGGCCTCCTGGAAGAGGATACCTGATTTTGCCCTCCCACCTAAACCCCTCAGAGCACAGGCTGTGGATTTTTACCTCCTTCCGGGTGCAGCCTCTGTTGGAGTTGGTGTAGGAAGGCCCTCCAGCTTGTACTGCTGAGCACAGAACCTCAGGAACGCTCCCTTTCTCTTGGAAATGGCCCCGGATGACGCCGGCCTCCTCACCCCATTCTCTGCCATCCGTGGAGGGGCACGCGGCACCCCTTCAGCAACACTAGGTTTCAACGACTCACAGCATTTGCACGTCCATGTGAAAGTCCCACGTCGTTTATGGTGGTGCTAGACCAAGATCATTCAGACATGTGGCCTGGGGAGAGAGACCTGGCGTCCTGTCCCATGAGGTCTCACTGGCTCACTTCAGTAGTTGAGGAAAGACGAGCTGTTGTGTTTTCTAATCCTTTGAGTCCGTCTGTCCAGAACCAGGGGTGTGTGTGTGAGTGTGTGTGTGTGTGGCTTTTCCCTATTGTCTTTTCCCCTCTGTGACTGTGGGTCACTAGTGCCAGAGGAGCCCGTCCAGGGTCCATTTGAAGTAAGTTGCACTTTTTAATGTTGTGGTGTTGATTAATTTGTTTTATTTCCCTCTTTTTTTTTTTTTTTTTAAATTTTTGCTGCATGTTTGGAGCCTTTAAATGTGATTTTAAAACGAATTTTTTAAGACATCAAGGAGAAAGACAATACACATCTCCAGAACACACGACAGGCATTTGACCCGGTTTGTTGGTGGGTGGCCAAGAGCCTTCCTTTCCCATCAACGCGTTTGGGCAGCCTCTTCCCCACATGCAACTCGGGGCATGACTGTTGTAACTCATCTGGGTTCTCATTCTCGGCCACTAACTAGATGTATTTATTGTAATGACGGAAGTAAGAGCAGATTTCTCTCCTGGTCATTTAACAAGTCGGAAAGTTGGGTGTGGTCTCAGCGGGTTTCATCTGAAGTGGTGTCCATGACAAAGGTCCACAGCGGCCCTGGTGGTGACGAAGGCCAACCCAGAGTGTCCACAGCTGCCAGACCTGCTTGGTCCAGGGGGAGAGGGGGCCAGCCGAGGTCACGGAGTTCACGGGCAGCCCCGTCCAAGGGCACCTTGCTGTCCTCTGGGCTCCTGCGTCAGTGCTGCTGGAAGCCTGGAGGAACGTCAGGAAGGTCTCTCAGCTTCTCTGTGTGCACCCGAGGAGTGTGTGGACGGGGGAGCGGCCGGCTGCTGTGTGAGGCCCCCAACCCAGAGGCTTCGTCCCATCCCACGTCAGGCCTGTGTGCCCTCACCCTGCTCCCCCTTCCCCTTCCCTTGAGTTTTATCTTTTCTTTTCATCTCTGTCTCTGTAAAAAGAGTGCAGAGAGTTAGCATTCCTTGGCTGGTGAGCCAGACCCTGAAAACCCAGCCCAGGCGCCGGCCGCCACCTCCACCCTCCTCCGGGGAGCAGTGCTGGCCAGTGGGGACGTTCCCAGGCAGCCTGTGAGAGGGCTGGGTGGTCCCATCCTGGATCATGTCTCTTGGGTTCCTTTTGTTGCCCCGTGAGTCAGCGGGCGGGGAGATGGGGTGGGGGGTGGGGGTCTCTATGTGCCTTTCCTCTGCAGGCTGATAGTCTGTGCCTCACTGGAGCAGAACAGACAGTGTGAGAAAAGTGCCACATCTGTCTCGTCGGCCCGCTGCCTCAGGCAGAGCTTTCAGGAACCGAAGTACCGGCCTGCTGACCCACGGAGGCTTCTCAGGCCATGGCCACGCAGCATCGGAGGAGAGTCAGGCATTCACACCGGCCGTGGACAGTGCAAACCAGAGGCTGCCACCGTGCATCCACTTTGCTCAGACTGTGTACACATGACCTGTGTGTCGCCTCAGCACCTCTCCCATCCTGGGACAGGGTCCTCAGACACAAATGCTTCTGTCCATCTTTTTGCTCAAGGGAGTAGGGATGAGTTTGTGCCCACGTACGAACATTTTTAGGGCGCTCCCTCTGGACAAACTCCCAGCAAATGAACAGAACCCTGTTTGCCAGCTCCGTCGCCAGTGTAGATGAGTCCACCGTGGGGCAAACGTGGCAGACTGAAGTGGGTGCGGCTGCAGTTTCACCAGTGTTCTGGAGATCCAATTTCAAGTTTGCCCTTTGCAGGCATGGCACCTGTCAGGGCTGGGAGCGGGGTTTGGAGCTGCAGCGTCTGGAGGGGAGGCATGGAGGAGGTGGAAGCCGGGTTCCTTCCTGTCCTGGGAGTGTAGGAAGTAGCTTCTCTGAGGCCAGCTTCCCCTTGTAATTTTCGGCCTGCCTCTGGTCCTGCCTCATTCCGAAGTTAAGAAGGGGCCCCCGCTGCAGACTTGAAGTTGCTTGCCTGAATCCACGTCAGGTTTTAGCTGTGTTCAGCCGCACCTGTCTTAATGTCTAACAGCTGCAGCACTGTCCGTGGTCCTAGGAGCTATGCCACGTGCCACCAGTTGGCTGCTGGCGCCACCTGCCCAGAGCCTTGGGAGGTCTGGTTCTGGGCTTGGAGTTGGTAGTTTCCATGGATGGGGACTTCCCACCCCACCAGATTTAGTGATTTTAATATGGGAAAGAGAGGAGAAATCTCAGGTCCAATCAGTGGTTCTGCCCGTTGGCTTTTCACTGACCCCTCAGCTGTGGTTTTCTCTGTCAGTTTCTGGCAGTATTGGCCACCCTCCCCCTTTTTCTTCTGGTTTCCTTTGCAGCTTCATTTCTCTATCAGTTTAAATGTACCTCATCACCCACTCAAGCAGATTATGTCCACTTTTTCACACTGACCTTACTCTTAAGAGCTACAGCCAAGGAGGGTGCAGTGCAGAGACATGTAGCGTTTGCCTTACTTGGAGCCGGAAGAGCTCAGAAACTCATGCTGTGAATCTGGAACTCAGCACTCCCCCTCGAGCTGTGAAAATCAGACACTTTGTCACAATATTGCCTGGAAAGGCCTTACCAAGGGCACCAGAGCCAACCTGAGGTTAACTGCAGATCCCACCTTCTGGGCTCAGTCCTCCCCGTGGGGCTGGTTCTCTGCCTGCCAGGCCGAGGGTGGCACAGAGGGTGCAGGGCAGGGCCATCAATCCAAGGCTCTTGCAGCTGGTGGAACACAGAGCCAGTGCTCGTTTCCAGGGCTAGAATTTCATCTCATAATGTACGTCGAGATCTGCAAAAGACCAACTTGTAGGCGGTGGTACTTTCCCCCGTTCCCTGGGGGCCGAGTATGCAGTCGGTGCTTTCCTTAATTACCTTGTGTTCTGTTTTCTGTGCGTGTCCCCCGACCCCAGTATCATGGAAAGGACCTCTGAGACAGCATCGTGGGTGGCTGTCCCCAAAGTCTGTGGTTGGCCAGAGGCTCGTAGCCCCCTACCTTGGATTCGTGCACGGGGAGGGCTCCTTGCCAGAGCCAAACTTCCTGTATCAAAAGTTGGCCAGGAAGAAGGCTTCATTTTACTAAAATCAAAGTGTGACACTATCATCTAGCCACACACTGAGCAGCAGAGGCTGTTTATTCTGATTGTGAAGCAAGGGTCCCTGCATAGTCCGCCCTCTGGCACTGCACCCTGTCAGATTGGATCCTTGTACATCGTGTGTCTTCTCGAGCCCCTCTCTGGTGCTGAATTGGATTTTAATCCTTGGCGAGAGACCTCAGCATCTCCTTGGGCTGGTCTGGGCCAGTAAATAGCCGCCTGAAGTGTTTATATAATTATCATGGTCAATAGTTAAGTGAAATTTGTACATTTTTGGTAACTTGGCACACACAATGCCCCTGCAGTTCTTTTCTGTTCGGTAGTTTGTGACTAAAAATCCCACTGTTATGTGTGTTAATTTATGAAAATAAAAAGATTCTTTTTTTTTTTTTTTTTTGAAAACCTTTCAGATAACTCTCAAGGCTCCTCTTATGGCTTCATAAGTTAAATTTTTACCTGTAATATAATGAGGTTGCTATTTATTTTAATAGACATTCCAAAGTTACATATATCACAACAAACATGTTTCCTCCCAAAGTGGTCACCACTTTTTGAGGACTGGCCTGTGCTCAGGGCATGTGTAGAGCTCCACCTGTGGGTGGCCTTCTGAGCCAGTTGTGCAGCATTTTAAGTTTACTCAGGCGGTGGATCATTTTGAGGGGCTTCAGTATCTGGAAACAGCTAAGACTCCTTGAGATTCATGTCACACCCCGTTAAGTTGGGTAGGGAAGCTGTGTGTGTGGTTTTTGAATAGTGCTGGTTTTGTCACATGGCTGGGAAATGAAAAAAGCAGTAACAAGTTCAGGTCAAAATAAACATCAAATATTAGTAAGATGTCTGGAAGAAGAGCTTAGCCTGCTGAGGAGGCTACCTGGGAGAGTATAAATATGGTGGAGTACATTCACTTACTTTTAAAAAGGCCTTGAAACAATAAAATGAAAAAAAGGTCTTGCCTTCTATCACATATCCTTCCCAATTGTACGTGAGTTTAGGCTGCGAGTCTTCTGATTCTCAGCTCTGTGTTTAACCAGTGGAAACTCAAGAGAATAACTGAATACAACGCTATTTACCATCATGCTGATATGTTCCAGAAAGAAGCAAAATTCCTGAGGATATTCTTCATCCAGAGGAAAAGCAGTGCCCAAGTCTTTCTTCCTGGCCTTTTTCCAATTCCTGGATTTCTGCAGCAAAGATCTCTGTCCATGTGGTCTGTCACCTTCAGGGAGCATCCTGCCTGGCGGATGTGCTTGTGCTGGTTAGGTTTCACGGTTACTTAGAGCAGAGTCCTCCCCACACCTTTTCTTCCTTTAGAAGGAAGAGGCCCGTCATCACCTGAGGCAGTGTTACTAGTTTGGTCCTTTATGTCTGGCTGTGCTGGGTCTTTGTTGCTTCGCGGGCTGTCTCTAGTTGTGGCAAGCAGGATCTACTCTCTAGTTGCGTGGGCTTCTCATTGCAGTGGCTTTTCTTATAGAGAACAGGCTCTAGGCACGTGGGCTTTAGTAGTTGGGGCACACAGGCTTAATTGCCCTGTGGCATGTGGAATCTTCCCTGGACCAGGGCTCAAACCCATGTGCCCTGCATTGGCATGTGGTTTCCTAACCACTGGACCACCAGGGAAATCCCCATGTTACTGCTTTAGTATCCCCACCACAGAAGCATGCCTTGATAGGGCCTCTTGAGAGCAAGAGGTCCAAACTGATGGAAGAATCCTCTACTGTGGCCTGCCCCCTGCGTGTGATGGAGACCTAATTTCTGCAGTTCCTTCTGGGACTTTTCTTGAGGAGGGTTTTAGAAAATCCCCAGTTCTTCAGGTAACTTCCAGGGTCACAGGTGAGTCTTTTCTAACGGCTTTTTCAGGCTTACTCCGTCCTCTTCCCTCCTCGCTGTCAGCCAGTACTTCTGCTTGGGCATTTCCCTGGGGTGGGAGCAGTTTGACCAGGACTTGCACGCAGACCCTTGGCCGGTGCAGGCATGGTCCTCCCTATGATGTATTCACCCAGCATCCTGGTGCCCAGAAGGGTTTTCTCCCACGTGATGCCCACAGACACTGTTCAGCTCTCTGCCTTCCCAGATCACTCTTAAAAGTGTACCCTCCCCCCACCCCCAGCTCCTGGTAAATCCTCTTTCCGATGCTTTATGTGTCTAGCATTTATAATTTCCTCCCTGTATCTGTTCATCCCTGTAAGGTAGGCTCCTCTCTGGTCCCTCTTGAGACCCCTCAGGCACCTAAAACACTGCCGCCTTGTTCAGTAGCCAAGTGGTGTCCGACTCTTTGTGACCCCATTGACTGCAGTATACCAGCTTGCCCTGTCTGTCCTTCACTCTCTCCCCGAGTTTGCTCAAGCTCATGCCCTTTGAGTCGGTCATGCCTGGTATATATTATAGGGGCTCAGTAAACACTTGATTGTGAATGAAAGGTCGCCTTCACTAACAGAACCTATTGTTTGACAGGCCGGCTGAGGTCCTCTCCATCCTGCCGATTCTGAGTATTTGAAGACCTCATGACTCTCCTCCCTTTTATTACCCTTCCAGGGACCTGGTTGGTGGCTGCACAGCAAGTGAACTGGGGCCCTTTCCCGGCGCGGCCACACCCACTCTGACCTCGCGACGTCTGATTGGCTGTAGCTCACAGGTGGGGCGGGGCCAGCGAGATGTTCTCACCTCCTGTGGGGTCGCCTACCTTCCACGTACCTCTCCGCAGCCCAAACTGGAGCCTGCATCCCTGGCCCTGGGCACGGACACGCCGGGATGCCGAGGGTGGAGGCTCCTGCAGGCAAGAATCGTCTTGAGAATTTTTCTCCCTTTTGCATTTTAATGTCAGACTTTGGGAGAGGGTAAAATGGTCCTTGGAAGAGTACAAACACGGGGCAAATATCCCCAGGTACTGCAGTGGTTGATGGGTTTCCCCCTACTGCCACCAGCCCGAAGTGATCTAATTTCGCCGTTGTCAGAACCACTCACTCCCTTGAAATCCTTCCCCAGTGTTCCTCTCTCCCACAGTAGCGTTTACTGACCCCCAGTGCCAGTAAACCAAGGTAATGGCACTGTTCATTACCTTCTTGAATCCTCACAACAACCTGATGAGGTAGATGTTTTTAATCCCCCTTTGTGGATGAGGAAGCTGAGCCTTAAAGACTGACTGACGGCGCAAGTGCTTGCGCCGAGGTCTCTTCCTACACCACCCGGTGCAATCCACCTCTGCTAGCAAACCCCACCCCTCGGCCCACACCTGCCTCTCCAGCCCCGCCCCCAGGCGCTCCGCCCTCTGGTTCTTCAAACCCTCCTTGCTGCCTCTGGCCTTGATGCTTTTGCACAAAAAGCTGTACCGTCGGGTGCACATACTCTTTCTTCCACCCCTACACTTGACTGCCTCCACGTCTTCGGGTCTCTGGAGGTTTTTGCCTACGGCTCCTTCCCTGTTAGGCGCCTCTCAGCTGCTTCCTCAGCCCACACACTCCCCCATGCGCTCAACTACCTGCACTGCGATCCACCCCCTCTCCACCCTGTGAGCTTCAGAGGAGCCCGACCGAGTACATTTATCTGCCTACAGGTCGTGCACCACATTTAGGTCCGCAACACACCTTCGGAAGAACTTTCATGATGTTCTCTAAGAGGCCAGGTGCTGGAGGTGAGGCCCGGTGAACCTGCCGCCCTCCTTACAGCCTCCTCCTCACGTCAGCAGCTCCTTATGGGTGTGTTTGTTTCCGTCACTGCCTCTTCTGTCAACTCCTTTCCCTCCCTCTCTCTTTGTCCAGTAAGTACCCCTCTCTTCTCCTCATTATATAGACACAATCTAGAACTGATTTATCATCTTAAACATTTATGGGGACATCCTTGGCAGTCCAGTGGTTAAGACTCCACACTTCCAATGCAGGGGGCACAGACTGGGTCCCTGGTTGGAGAACTAAGATTCCATATGCTGCATGGCTGCAAAAAAAAAAAAAAAAATATATATATATATATATATATAATTGAACAGAATCCCAAATTAGGCACATGCTGCCTTAAAATCATAGAACTTCATAGCTGGAAGGAGGCCTTGAAGCTCTGATATGTAAAGATTTTACATCCACACACAGACATATATATTCTTAAATTTTAAGGGGGTTGGAACATGTTCATATGTATATACATATACACATATATATGGAGAAGGGAATGGTAATCCACTCCAGTTTTCTTGCCTGAAGAATTCCATGCACAGAGGAGCCCGGCGGGCTATAGTCCATGGGGTTGCAAAAGAGTTGGATACGACTGAGCAACTAACACACACACACACATACATATATATATATATACATGTATGTATATATACACACACAAAGATACACACATACTGAAGATGTCAGAGGTTGTATACGAGTGTCTTTTACTTTGCTTTGTTGTTGTTTACTACTGAAAAGTGCTGATCACCTTCCCCTGTAGAACTGTGCTAGAATTTCCATGTTGTTGTTCAGTTGCTAAGTCATGTCCGACTCTTTGAGACCCCTTCAACTACGGTGCAATTTCCAGGCAAATTGGAACCTTCATCACTACTGATGGGAATGCAAAATGGTACAGCCACTTTGGAAAACCTTGTGTCAGTTCCTTAAACAATTAAACTATTGTTGCTGTTCAGTTGCTCGGTTGTGTCCAACTTTTTGTGACCCCATGAACTGCAACATGCCAGGCATCCCTGTCATTCACTATCTCCCAGAATTTGCTCAGACTCATGTCCATTGAGTCAGTGATACCATTCAACCATCTCACGCTCTGTCCTTCCTAAAGAATTTCTATAGCAAGTTTCTATGCTGACAACCAACGTGGATCCTCAGATGTGAGATGAGGTGCTGAAAGCCATGACTTCCACTCCTCTGGGCTGGCCGGGTATGTGCTTGTCCCTTTGCCCCTCTGAACTTGTCAGCAAGCCTTCCCTGGCCTTTTCTACAAGTATTTCCAGCTCTCCAGCAAGCCCTC EMBV3_04512 CTGGAGATCGCTCAGGCGAAAGGCAGCCTCGTGTCCTCTAACTTTTGCCCTCTGACTCTC Gene BVV0101_012844 + 0 NULL GK000013.2:3170171-3369181 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39749 GCCATTGTCCATGACTGAAGAGGAAAGAGACTGGAAATTAAGCCCTCTCAGATAACTGCC Gene BVV0102_139675 + 0 NULL GK000005.2:29336697-29347732 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198322 1 XLOC_119977 NonCoding TCONS_00198322 XLOC_119977 NonCoding NonCoding - 5:29344780-29345217 - TSS147890 437 0.405034324942792 1 0 0 0 0 0 0 0 0 0 0 0 0 8.18234163451159e-06 0 0 0 0 0 0 0 0 0 8.49046265214609e-05 4.19865460408461e-05 0.000421991787754985 0 0 0 2.19797632606584e-05 0 8.25480173660442e-05 0 noncoding 0 0 0 0 TCCACTGTGTGTATATAAACATATAATGTTTGTATGTATTTTTATATATATATAAACAATGGCTGATTTAATGCTGTTGACTACTAATTGTAACATCTCAGTGGAGTGAACTTGCAGTTGGTATCTATTGACTGATTTTCTTTTTCCTTAAGTGTGAGTCATATTTTTGTTTCTTCAGATTTCTAGTAGCTTTATCATTGGGATGGATTATATTCACTTACAGAGTGATTTTTATTCCAGAAGGCAGTTATCTGAGAGGGCTTAATTTCCAGTCTCTTTCCTCTTCAGTCATGGACAATGGCTATAATTTCTGCTCAACTCTTTCAGCTTCTAGCTGATGCTTTGCTTCACCAGGAACTCTGGATTTTTCTCCACATAATTTTGTTTAGCCATTAATCAAAGATTTTCACAGATTCTACATGCAGGTTTGGAGACAT TCONS_00194457 TCONS_00194458 TCONS_00194459 TCONS_00194460 TCONS_00194461 TCONS_00194462 TCONS_00194463 . 3' 2502 TCONS_00194457 TCONS_00194458 TCONS_00194459 TCONS_00194460 TCONS_00194461 TCONS_00194462 TCONS_00194463 . 3' 2938 EMBV3_20877 GGCCCAGTGGCCCAGCACCACATTAAATATCATGGCTGTCTTTTAAGCATGAGCATTGGG Gene GeneID:616182|SMAP:NM_001035474:234_cdna UTR3_Alt 3 NULL GeneID:616182 15 GENE SMAP MGC128249 small acidic protein EMBV3_16576 AGTCGAGAATGGCTCAACTTCTTGCCAAAGGAAACCACCACGCGGGAGCAAAGCCCTGGA Gene BVV0102_241504 + 0 NULL GK000013.2:28275521-28288105 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044863 TCONS_00044866 TCONS_00044861 TCONS_00044864 TCONS_00044865 TCONS_00044862 1 XLOC_026299 Coding TCONS_00044861 XLOC_026299 Coding Coding SEPHS1 13:28286603-28299333 j TSS32885 2236 1 TCONS_00044861_1 152 0.0152057245080501 4 0.824652368607118 7.71893060761293e-05 2.12799415483964e-05 3.61290184774317e-05 1.44429074925136e-10 0.000140058284683495 1.9816147404062e-47 7.15676204987673e-05 2.24916216071547e-14 0.000277044515810429 0.000673326331827926 0.000204427907954959 7.79312166262995e-05 8.93175757125057e-06 9.15814630643746e-31 1.6075708026079e-104 0.00541220066530776 0.000845551445091041 0.00280385028501823 5.65288213145533e-05 5.50382054054287e-05 3.20791573188008e-05 0.0020963555210664 0.00337461289945738 0.00202223027773246 5.91177590929351e-05 7.08663353885234e-06 4.41349503558641e-12 0.000597792659383972 0.000673050528805158 0.00128028185331426 XM_005214175.1 SEPHS1 PREDICTED: Bos taurus selenophosphate synthetase 1 (SEPHS1), 0.0 3961 100.00 0.981663685152057 NM_001195602.1 SEPHS1 Homo sapiens selenophosphate synthetase 1 (SEPHS1), transcript 0.0 2219 82.11 0.976296958855098 TCONS_00044861_1 sp|Q8BH69|SPS1_MOUSE SPS1_MOUSE Selenide, water dikinase 1; 3e-108 318 100.00 0.993421052631579 1 coding 0 0 0 0 -0.0130391997239743 0.973036540792416 0.0012392327264675 0.985085899327804 AGATCTCATGTACTGCAACTAAGACCTGGCCAGCCTGAGAAGTGGAATAAAATCAAGCTAGTGGTCACCCAGGAGGATGTGGAGCTGGCATACCAGGAGGCGATGATGAACATGGCTAGGCTCAACAGGACAGCGGCAGGACTCATGCACACATTCAACGCCCATGCGGCTACTGACATCACGGGCTTCGGGATTCTGGGCCACGCACAGAACCTGGCCAAACAGCAGAGGAACGAGGTATCCTTTGTGATTCACAACCTTCCCGTCCTGGCCAAGATGGCAGCCGTGAGCAAGGCCTGCGGAAACATGTTTGGGCTCATGCATGGGACCTGCCCAGAGACATCAGGCGGCCTCCTGATCTGTCTACCGCGTGAGCAAGCAGCTCGATTCTGTGCAGAGATCAAGTCCCCCAAGTATGGTGAAGGCCACCAAGCATGGATTATTGGGATCGTGGAGAAGGGTAACCGCACAGCCAGGATCATAGACAAGCCCCGGATCATTGAGGTCGCACCGCAGGTGGCCACCCAGAATGTGAACCCCACGCCCGGTGCCACCTCGTAATCTAGGCTAAGGCAGCTGTGTGGTTTTGTTTTTAAATAGCTCTATTTCCTTTATCATCATTTCAATTAAAGACTATAAACAACAACGAAAAATCTCATTGTGTCTACACATCTGGTGACCTTAGGTCGATTTGTGAGTGGATGCAATTAATCAAATAAAATCCATTGCCTTTTTTTCCCGTTACATTAACTGAAGATGCACCTAATCTTGAGGCAGCTTCTGAGTTGAGAATTATATTGTTATCCAATACTGTTGATTCATTTTGAATCTTTAGACACTTATCTCTTGCCGAGTAGGCTCTTTTTAAAGGTGCTTTCACGTAGCACAGACATTACCTGTCGTAGTGTATAGCAGTTTGTGTCTTTTCATTTTATGTATATTTATCATTATCCGCCCGATCCTTTTTGAAGTGTCTGGAATGGTATTCTGGAAAGACAGGATTGGTGAGGGAGTGACACAATGGTGTCCCAGTAGCAAGAGGGTTGCATGAATCCTTCTAGTCTTCTAATTCAAGAGCATCTCTTTGACCCAAGGGTGCATTCAGCTAAACCAGGCAAGTGCTTAACTGCATGGAAAGCACTTTGAAGACAAAAAAGAAATGTTCTTTCTTTCTTTTTTTTGTAGCCTTCCTAATACTTGCAGTAGTATCATTAACTGTTTTCTTTATTGATAGCAAAAAAGGACACTTTTTGCAATGTAATTAGATGTTCAATAGCACAGCAAGGATTTGCCTCTGAAAGGGGGTTCATGTATAATACTCATTTACAAGTCAGCATATAATTAACTACACAAATAATTTTTAAATATAATCAATAATAATAAAGACTGTTCTGTGGATAGTTGTGTTTAATACATTTTATATTTTGTATAGTGATTTCAGACCTTTTGTTTCCTTAAAAGCCAGCTGTTTAGCCTGAGTCTTAGCATTATTTTGTCCCTTGCGCCAGTACTTTTCCATGCACGCTTCCTGTGATCTGTGTGGAAACCTGCATTGGCCAACCATGCAGCTCGAACTTCAACTTGTTATTCAAATAAATATTTAATTTTTTTTATTGCTCTTGTATAATCAGATGCCCCGTTTAGTATTATTTTAGAAGCATCAAGAGGGTTTTGGCTAAAATACAATTTATTGGGGGAAAACTAGATTTTAGTTTTATAAAACTTTCAAGTCTTTCACGGGACCTATATTTTCTTGAATTAAATTTTGTAGTTCTAGAACAAATAGGTGATCTAAAAAGGTGTTTATCCGTGTTCCTTAAAAACAGAGGCTTCCTTTTATTTTCACCTACTGACCCAGTAGGAGAGGCTCCTCTCCTCACGTGTCACACTGTCCCCGCATGTCCCACCGCCCGCTTCTGAGCGCTTCCTGCCTACAGGCACCAAAGTCGAGAATGGCTCAACTTCTTGCCAAAGGAAACCACCACGCGGGAGCAAAGCCCTGGAAGAGGCTCTACCTTGGACTCGTCCTCCTTCAGGAGCCAAAGCGCAGCCTCTTTGCACACGTTACTGGAACTCAAGCCATTAACTTCAGTGTGTAGGACCAAGGGGCTGCAGCGAACTGAAGTTAACTGGACACTGGGTAGGGACTGATGACCGTGTTGGTCCTTAGAAGCTGCAAATTGGTGGTCAGCAAAATAAAATGTGTTGGAAACCTCTGAGTGAGATGAACATACTG EMBV3_03563 GTGCTTTGCAAGAAAGGATCTGCGCCGACCGCACCCAATGGCTGTACTGGTGATGCCAAT Gene GeneID:509394|ISYNA1:NM_001046032:41_cdna Constitutive 0 NULL GeneID:509394 7 GENE ISYNA1 MGC133800 inositol-3-phosphate synthase 1 EMBV3_08085 GTAGTCCCACAGGTCTTCCTTTCACGTAGGTCCCAATTCTTCGCCCCTCACTCTTTTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37515 TCGAGTGCCACTGCCCGTCGGGCTGGAGCGGGTGGACGGCTTTGAGTGCGTGTGTCCGGA Variant GeneID:517405|JAG2:XM_002696794:521_cdna 713^785 2 EMBV3_40235 GeneID:517405 21 GENE JAG2 NULL jagged 2 EMBV3_29230 CCTAGATAAGTTTGGGGAGCAAATAGCATAAGTAAGTAGCACTGTGAGTCCCTCTGTTAT Gene BVT0102_072000 - 1 EMBV3_21035 GK000010.2:8524195-8528497 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015849 TCONS_00015853 TCONS_00015857 TCONS_00015850 TCONS_00015856 TCONS_00015852 TCONS_00012505 TCONS_00015855 TCONS_00012503 TCONS_00015851 TCONS_00015858 TCONS_00015854 TCONS_00015859 TCONS_00012507 TCONS_00015860 2 XLOC_008575 XLOC_007878 Coding TCONS_00015857 XLOC_008575 Coding Coding WDR41 10:8526059-8687515 j TSS11103 3705 1 TCONS_00015857_2 149 11 0.977120559908334 0.000287076299907162 0.000787632392453363 0.000639785452067919 0.000267121241446721 0.000149267217545934 0.00046214252742543 0.000586323919524423 0.000118482910265985 0.00160361636958294 0.000217662196676328 5.12408630629755e-23 2.56337619539283e-11 0.000149411839251575 0.000407838774050545 0.000320751641232914 9.83325208519625e-20 2.23299724597672e-08 2.55907996537202e-15 0.00027886963585655 0.00161860362554999 0.00010976580912954 1.94805420425035e-21 1.60641394413799e-46 2.8882595242423e-06 0.000147813486044181 0.000356920676451289 0.0004234843958857 1.38432250650353e-11 1.10975219894037e-16 2.74303869128506e-16 XM_005211187.1 WDR41 PREDICTED: Bos taurus WD repeat domain 41 (WDR41), transcript 0.0 2262 100.00 0.338191632928475 XM_005248551.1 WDR41 PREDICTED: Homo sapiens WD repeat domain 41 (WDR41), transcript 0.0 812 84.81 0.186504723346829 TCONS_00015857_2 sp|Q9HAD4|WDR41_HUMAN WDR41_HUMAN WD repeat-containing protein 41; 1e-97 293 91.95 0.993288590604027 1 noncoding 0 0 0 0 -0.0112613964353784 0.917627996244397 -0.0194140428636719 0.76584004940243 GGTGCCCGCACTTAACGCAGGGCCCGAGAGTCGACAAGCTTCTCGCGTGAACGGTCTCTACCGGACAAAGCAGCGGACGGGAGCCCTCGGCGTCGGGCTGCGTCTGGAAGCACCACGGTGACGGAAGCGTGGAGAGCTCCGGAGCTCTTCCTTCTGGCGTCTGCCCCAAGAAATCTCCTTTACAGACAATAGGTGAAGAACAAACCCAGAACCCCTACACTGAACTGCTTGTACTGAAAGCTCATCATGACATTGTACGGTATCTGGTACAGTTAGATGACTCAAGATTTGCATCTGCTGGTGATGATGGAACTGTAGTTGTGTGGAATGCCCAGACAGGAGAAAAACTTTTGGAACTCAATGGACACACTCAAAAGATAACAGCTATTATTACATTGCCTTGTTTGGAAACTTGTGAAGAAAAAAATCAACTGATCTTGACAGCCTCTGCTGATAGAACAGTCATTGAATGGGATTGTGATACTGGTAGACAAGTTCAGAAAGTGTCATGCTTCCAGTCTACTGTAAAGTGTTTAGCTGTTATTCAGAGACTAGATGTTTGGCTCTCTGGTGGGAATGATCTGTGTGTGTGGAACCGAAAATTAGATCTTCTGTGTCAGACGAGCCACCTTTCTGATACAGGGATCACTGCTTTGATTGAAATACCTAAGAACTGTGTTGTGGCAGCAGTTGGCAAAGAACTGAAATGTATTTGTTGCAGTTGGAAGGGGTTTATATGTGTATAACCTTCCAATGAAGCGTGTGATTGCCTGCCAGAAAGCTGCGCATGACTCCAGTGTCCTGCACGTTGCCAAACTCCCAAACAGGCAGGTTATCTCATGCTCAGAAGATGGCAGTGTACGCATTTGGGAGCTACGAGAAAAACAGCAGCTTTCAGTGGAGCCGGCGCCAACGGGTTTTTTTAACATGTGGGGATTTGGAAGAGTAAATAAACAAGCCAGCCATCCTGCTAAAAAGCAACAAGAAAATGCCACTTCCTGTTCACTAGAGCTTATTGGAGATTTAATTGGACACTCATCATCTGTGGAGATGTTTCTGTACTTTGAAGACCATGGACTAGTGACTTGTTCTGCTGATCACCTCATTATTCTCTGGAAAAATGGAGAACGAGAATCTGGATTGCGCAGTTTAAAGTTATTTCAAAAATTAGAGGAGAATGGTGACTTGTATCTGTCTGTCTAGGTTAAGGAATTTAAATACCTGTACATGAACCTTGAACATCAAATATAGGGTAATGCTCTGAAAACCATTACCATATTGATTATTTATTTAACTTTGTTTAATTTTTAGGGGGGTCTGCAAACCAGCAACAGGTTTGCTTCTGAGGTATTAGTACATCCACCAAAGAATATGGCACAAATTTTTCATTTGACTTTCCTCATAAGTTACCTGAAACCATTGTAGGAATGGGTCTGATTTCAGCAGTGACTTTTCAGAAAGTGTTCAGACTTCAGCACAACTGTCTGATGAAGCAGATTTAAATTATACCACAGTATCCTCACAGAGATAAATTTTTTATGCTTTAAATTTTACACTAGAAATTGTATAATCTTATGCTTAATGAAAAGAATAGTACTCAGAACCTCTCTCTGTCTTTAGTGTTACTATATTGCCTCTAACTAAATTCATCACCAGGAATTAGATTTTTAAAGTTTTACATGTAGTTTCTTTCATTTAGCCTTTCTGGATTTTGAAATACCTGTTATCCAAAACTAATATTTTATCTATGTGACCACCTGTCATTCTTTTAAATACTTATTTAAAGAAACCTGCTTTAATGGAAATAAATATACATGATAATTACGGAAGATATTTTATGAGAAAAATGAAAACTCCACTGAAGAATAAATAGGATGTAGCATATCTTGAATTTAAACCTTGAGCTATCTAGAAAACTGATGCTTTCCTGGAGGAAATGAAGATTCCATAGTAACTGTCTGTTGTTGAACTGGTGAATGCTGTGTTTTAAGTGTCTTAATTTGAATCTAGACCCTGGAAGGAGGTAGAAATAATAGTATTTTTTTTATTCTTTGGTTTCCTTTAGAACCTGTTTGATTAAGAATTCTTGTGATAAATATCCTTTCTCCTACAAATTCCCCTGGTCTTTAGTAACTACTACGATGCCATGAAACAAACCTGAATCTCACTGTTCTAACATCAGCTTTTAAAAAAATTTTTGGTGCCAACTTTTAGTGACTGAACAATAACCACCGTTTGTTTATATCATTCATTTTTAATTCTAGCTGCTAAAATCCCTATCAACTCAAATCAGTAGGAATCTTATTAGGGTGTATTTCTTCCCTCTAGCCTGAACACCCATTTGGTACAAGACCAGCGGCTGCCCCTCATATATGTTAGAGATGAGAGCTAGATCAGTAGTGTTACCAAAGTGCCTGATTCATCTTACCATTGGCTCAAATATGAAATGCTTGAGACAGGCTTTACTTAACGTAGTTTCTTGCAGTTACCTGAGATTAAATCAGCTTCATCATCCCATCAGCCTTAGAGTACTGTTTCTCCCTTTTGGTACTAAAGGATAAAAATTAAAAAGTGTCCCATACATTAAAAAATGGGTGGTTTTAACTGTGGAGTTAAACTGCTGATGAAAGAATCCTATTGAAGTAACTACAAGGGGGCTGATGTGTTAGGACTGATACTTCTCAGAGAACACTTTCTGTGTTTATTCATCACACACACCCCTAACAGAATCCACAGACCCTAATGGAATCTTTGTAAAAAAATTTTTAGCTAGTTTTACCTTTGACAGTTGCTTCTGTTATTAACTACCTGCAAAGTCTGGATGAGCTATGGTCCTCTATGCCAGATGAGTGCCAAGCCCAGTCAGGTAAGCCCTTCTAGTTAGTTAGCTCAATTCCCATTATCAGTGAACAGCTTTAAAAAAAATATGAATGAGAGAGAAGGGCTTATATGATCACCCCTTCAGCAAAACCAAGTAATGTTCACAATCATTGTTTTAATTCACAATGAAAACAGATTTATGGAGAAATACAAAATTTACATAACCTCCATTTTATAATAGAAAAATCAGCACTGCCTTTTAGCCAAGATCATTATGGCATAACTGAGTGTTTACACAGAGGCACCTCTAATCTCACCCTGAAATTGGCACATGGGTAGGATTCCTAACCAAGCCAACGTGCATTTTGGTCTGAGTGCATCAGATTATTGATCAGTCAGTTTTAGGCTTTTAATTTTTCTCCATAGATGGACTTTGCCCTATTACTAATTAGCTTTTTCTTTGGAGGATCTGCATTTTAAGGTCATGAGTTTATAAACTCTTTTTGAATTGTATAAGATATTCAGTGAATTATAAAGGAATTCATAGATTCTTAACTGCTTTTCCTATTTTGTTCTGGATTAAACAAATTATTCACAAGGAATGTTAGAAATCCTAGGTAAGTTTGGGGAGCAAATAGCATAAGTAAGTAGCACTGTGAGTCCCTCTGTTATTAAAATTTAGAGAAACTTGATGGTTTTGATTTCATGAATGCCCTAAGGTCAGAGATGGGAGAAAACAATGAGATGGGAGAATCTAGCCGGGACTCATACTTGATGGCTGCTCACTAGTTGTATGGAGACTACTGCTAAAAGTTGAACTTTCAGATTAGAAGACTACTATAACTGACATCAATATATAGTATATGCATTTTTTTTTCATTTCCC EMBV3_26115 TCTTCCTGTGGCAGACATGGCTAATCAATCACAGCCGTCTTTCTCCATTGGGATTCCTGG Gene GeneID:539663|MUDENG:NM_001015670:101_cdna Constitutive 0 NULL GeneID:539663 10 GENE MUDENG C14orf108 MU-2/AP1M2 domain containing, death-inducing EMBV3_38771 AACCAGCAAGAACCTACTATATAGCACAGGAGCTCTGTTCAGTGTTACGTGGCAGCCTGG Gene BVV0102_251493 + 1 EMBV3_05379 GK000013.2:60119698-60185128 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16121 CAAGTAATGAGCAGTGGGCAACCTGTGAGGGAGGTGCTAACAGTTGTCAGAAGGTCAAAG Gene BVV0102_318512 + 0 NULL GK000013.2:1695917-2211088 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41136 GACAGGATCTCTGATATGGGAGAGTTGAAGCTTCAGCTTCTGGAGATGGTAAAGAGGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37589 GTGACCTGCTCCTTGCCTTAAGTGCTGAAGGTCACCAAGAAGAGACAGAGAGATGCCAAA Gene BVT0102_042390 + 0 NULL GK000010.2:80167192-80178530 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014939 TCONS_00014940 TCONS_00014941 1 XLOC_008389 Coding TCONS_00014940 XLOC_008389 Coding Coding RDH12 10:80159111-80168630 = TSS10666 2546 1 TCONS_00014940_2 316 0.096229379418696 7 0.733242277789452 0.000605773655934036 5.92837420959601e-99 0.00168276945458002 0.000648696388371114 6.6978409375959e-05 0 0.000386004095061165 0.000437925287673801 0.00082351542152864 5.0297595419284e-05 5.93011291886007e-76 1.41134919070435e-17 0.000277488912366922 6.56842563252873e-05 7.45084988426372e-05 6.94770712116304e-07 1.3150291552375e-146 0 0.00309001262794501 0.00173236492440022 0.000133534176719723 0.000244306629086442 0.000569145077540959 1.63483143117408e-06 0.00175604010665325 0.00286308009714587 0.000160600957243015 8.85533108995694e-05 8.38481238102302e-120 0.000647036981475642 XM_005211942.1 RDH12 PREDICTED: Bos taurus retinol dehydrogenase 12 (all-trans/9-cis/11-cis) (RDH12), transcript variant X1, mRNA. 0.0 3177 98.68 0.711311861743912 NM_152443.2 RDH12 Homo sapiens retinol dehydrogenase 12 (all-trans/9-cis/11-cis) (RDH12), mRNA. 0.0 1537 81.31 0.631578947368421 TCONS_00014940_2 sp|P59837|RDH12_BOVIN RDH12_BOVIN Retinol dehydrogenase 12; 0.0 641 99.37 0.996835443037975 2 coding 0 0 0 0 -0.0076103276123211 0.94354618686493 -0.000329363485566198 0.997100599465164 CAGGCTGTTGCTGAGCACCCAGGATCGAGAGGAGCTGGAGGAGAGAGAAGCAGCAAGAAGCAGCCAAGAGTTGGAGCCAGACCAGGAGGAGCCTGAGCCAGAGTTGGAGTAGAAGTTGCTCTTGCTGAAGCAGCAGCAACTAAAGAAGTTGAAAAGATGCTGGTTGTCTTGGGACTGCTCACCTCCTTCCTTTCTTTCCTGTATGTGATCGCTCCATCCATCAGGAAGTTCTTTGCTGGCGGGGTTTGTAGAACAGATGTGCAGCTTTTTGGAAAGGTGGTGGTGATCACTGGTGCCAACACAGGCATCGGCAAGGAGACAGCCAGAGAGCTCGCTCGCAGAGGAGCCCGAGTATACATTGCCTGTCGAGATGTACTGAAGGGGGAGTCTGCTGCCAGTGAAATCCAAGCTGATACAAAGAACTCCCAGGTGCTGGTACGGAAACTGGACCTATCTGATACCAAATCCATCCGAGCCTTTGCTGAGGGCTTCCTGGCAGAGGAAAAGCAGCTTCATATTCTGATCAACAATGCAGGAGTGATGCTGTGCCCGTATTCCAAAACAGCTGATGGTTTTGAAACCCACTTGGCAGTCAACCACCTGGGTCACTTCCTTCTCACCCACTTGCTCCTGGGGCGGCTGAAGGAGTCCGCCCCTGCACGGGTGGTGAACCTGTCGTCAGTGGCCCACCATCTCGGCAAGATTCGCTTCCATGATCTCCAGGGTGACAAGTACTACAACTTGGGATTCGCTTATTGCCACAGCAAGCTGGCCAATGTGCTCTTCACTCGCGAGTTGGCCAAGAGGCTCAAAGGCACGGGAGTCACCACCTACGCAGTGCACCCAGGCATCGTCCGCTCCAAGTTGGTCCGACACTCCTTCCTGCTGTGCCTGCTTTGGCGGCTCTTCTCCCCCTTCCTCAAGACGACGTGGGAGGGGGCCCAGACCAGCCTGCACTGTGCGCTGGCTGAGGGCCTGGAGCCTCTGAGCGGCAAGTACTTCAGTGACTGCAAGAAGACCTGGGTGTCGCCCAGGGCCCGGAACAATAAAACGGCTGAGCGCCTGTGGAATGTCAGCTGTGAGCTTCTGGGAATCCAGCAGGAGTAGACCTGGTGGAAGAGGCATTGTTGTATCAGGCCGAGACCACACCATGAGAAACAGGGACGGAGGAGAAAGCCTACCCTGCAGGCTTGTCCTGGCAGGCTGCTGTAGTGAACCCTGACCTGCTGTGATACTCCCAACCCTTCTAGAAATCTTTGCACACCCAACATTCTCATGAGGCTGGCTCATGGCATAAGATGGTCACACCTACAGAGCACTCTTCTCCAAGACTTACAGAGACTCTTGGGCCAGGAGAATGGGGCAGATGTCAGGCTGGGCATGAGAATGGCAGAAGAACCTGGGAAAGTGGCTCAGTTTCCTCACCAAGACCAGGAATGCCAGTCAGCACACTCAGCTGAGGGGATGAACATCAGTGTTACATCTTTCTAGGATCTATAGGCTCAAAGACTATTGACTGATCTCTTTCCTCTTTGTAACGCTAGTCTGGAGTCTGGACCAACTCAGGAAGATCTTGGCTCAACCTTGGCTGACTTTATTTCCTTCCTCTGAGCATCCTGGAGCCATAGTGTAAAGGCTCCAGTGTAAAGGCACAACAGCCTGTTCTCTCTTTCCAGTAGTTTTTTTTTTTTTTTAATTAAAAACAATTTTTTCAGCTCTATTGAGATATAATTGACATATAACGTTGTATAAGTTTGGACCTTCCCATTTTCAATCATGTAGATGGTTTCTTTTCCTAAAGAGTTGCCTTTGCCTCAATTTTAGAGAAAATAAAGACTGTGTATTCATCTTATTGCCTTATTTATTCTTTCAGGGTAGCAAGGGAGAAATGAAACCAACGTCAATGAGTAATATTTCACTTTCTTACCCACTGACCCATAATCTTCTTATAATATGTCCTCTAGGTACAGAATAAGATGGTTCAGTTGGGTGTTTTCTCAAGTTTCTTTCAGCTCTCACATTTTACTATTTAAGAAGTGGTAGGAGTGATTTAAATTATACAGATGCTGAGCTTCACTATAGATCAAGGTCAGAGGCAGTAGAGGACTTCATTTAATTTGATACTTAAAGACAGAAAAATCAAGCTCTGATAAACCCTCTAATTAAAACCATAGATCTCTTCTCTTCTGGCCTCCCTGTTCCCGTCTACTGTGGCCCTGGGTGACCTGCTCCTTGCCTTAAGTGCTGAAGGTCACCAAGAAGAGACAGAGAGATGCCAAATTTTTAAGTCAATTGACCCAAGAAATTATGTTATTGCTTCCAGTTTGAACATATCCAAAGGGCATATGGGAGAAGGCAGTGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCGAAGAGTTGGACATGACTGAGCGACTTCACAGCTATTTGTAAGGCCTCCCCAGACAGCCATTTTGCTTTTTTGCATTTCTTTTCCATGGGGATGGTCTTGATCCCTGTC EMBV3_06742 TCCTACAGCTGTGAATTAATTTAAATAGTGCAATGTAGTTACCATATTATGTTCCAACTG Gene GeneID:514697|RFK:XM_002689667:11_cdna Constitutive 2 NULL GeneID:514697 8 GENE RFK NULL riboflavin kinase EMBV3_00766 CATTAAGGTTGGTGAGGGATATCTAGGAGAGATGGGGAGGGAGAAGCTGGCTTTCATTGC Gene GeneID:518832|SVOPL:XM_002686996:856_cdna Constitutive 0 NULL GeneID:518832 4 GENE SVOPL NULL SVOP-like EMBV3_30764 GAGCCATGGGTGGGTCTAGATGGCTTTTGTGGAGAGATTAGCACACCCCCAACTTTAATA Gene GeneID:781586|SLITRK5:XM_002691917:7_cdna Constitutive 0 NULL GeneID:781586 12 GENE SLITRK5 NULL SLIT and NTRK-like family, member 5 EMBV3_33959 TACCAATTGCCATGTCACCCTAATTCTCTGTTTTGAGTATTTACTTTCATTGATGTGTGC Gene BVT0102_352258 + 0 NULL GK000003.2:39266715-39513821 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20543 CTTCACAAGTAAATGGGCTTAATCAGAGGTCACCTGTCTGCTTTTGATTGTCTAGGTCAC Gene GeneID:512002|HIBADH:NM_001046106:10_cdna Constitutive 2 NULL GeneID:512002 4 GENE HIBADH MGC128999 3-hydroxyisobutyrate dehydrogenase EMBV3_02453 GGAAGCTGAGATCTGCTGTCTTTTCTGTGGAGGAGCTGTGAAGTAGATAGTGACGTGTGG Gene BVT0102_090653 - 1 EMBV3_39226 GK000006.2:72277700-72468294 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16911 GCAAGAGCCTTGGAAGAGTAGAAAAATAACACCTCCTTTATGCAAGTGTGGCCGAAGATC Gene GeneID:538719|ERI2:XM_002697985:55_cdna Constitutive 0 NULL GeneID:538719 25 GENE ERI2 NULL ERI1 exoribonuclease family member 2 EMBV3_31413 TTTACAAAGAATATCCAGAGGGCGCCTCCAAGTATGTGGCAGAACACGGACAAGGACAGC Gene GeneID:505366|WFDC1:XM_002694744:130_cdna Constitutive 0 NULL GeneID:505366 18 GENE WFDC1 NULL WAP four-disulfide core domain 1 EMBV3_27642 ACCAAGTGGCCTCCGAAAATGGCATCCTGCAGTGTTACTCCTATTACAATCAGCAGACGC Gene GeneID:407772|CCR8:XM_002696863:253_cdna Constitutive 0 NULL GeneID:407772 22 GENE CCR8 NULL chemokine (C-C motif) receptor 8 EMBV3_22683 GTAATCGTTTCGGACGGTACTAAAACTTGCATATATGTGTGTTATATGAATCCTGATATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38538 ATCTGCCTGATACTCGCCAGCTGAGTCTCGTGACACCTGCCCGCTCATCTGACTGATACT Gene BVV0102_020685 - 1 EMBV3_32201 GK000007.2:44010127-44057896 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161435 TCONS_00141899 TCONS_00143621 TCONS_00161432 TCONS_00220698 TCONS_00161434 TCONS_00241759 TCONS_00161433 TCONS_00143615 TCONS_00143618 TCONS_00007875 TCONS_00161436 TCONS_00143622 TCONS_00119385 TCONS_00119386 TCONS_00143617 TCONS_00143620 TCONS_00022498 TCONS_00141900 TCONS_00220697 TCONS_00220699 TCONS_00119383 TCONS_00143619 TCONS_00161431 TCONS_00143614 24 XLOC_098326 XLOC_086326 XLOC_088042 XLOC_098323 XLOC_134015 XLOC_098325 XLOC_148423 XLOC_098324 XLOC_088036 XLOC_088039 XLOC_003435 XLOC_098327 XLOC_088043 XLOC_072891 XLOC_088038 XLOC_088041 XLOC_013168 XLOC_086327 XLOC_134014 XLOC_134016 XLOC_072890 XLOC_088040 XLOC_098322 XLOC_088035 NonCoding TCONS_00141899 XLOC_086326 NonCoding NonCoding - 24:24861532-24862670 - TSS106110 1138 1 0 0.00132518225739355 0.000271351682914283 0.00038116856358547 8.33090922154434e-05 0.000179562222282472 0.00134282338898988 0.000132475609405257 0.000861687814352093 4.09396664004371e-05 7.32148482460523e-05 0.000296081943755115 2.09336009144352e-05 7.27126472759072e-05 0.000836192561836734 9.01450796602426e-05 0.00070063089693128 0.000745872616198194 5.87955415521431e-05 7.00148769060103e-07 0.000575016577542355 3.28761427271939e-05 0.000419784658255556 0.000166694994113643 0.00251986048606475 5.61598708660892e-05 0.000887439544128711 0.000370697926167029 0.000643062092308777 0.000162639531543882 3.64790387306044e-05 0 noncoding NNGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTGATCTGGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAACGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGACCGGGCAGGTGTCGTGGGGCTCAGCTGGCGAATATCAGGCAGATGAGCGGGCAGGTGTCGCGGGGCTCATCTGGCGAATATCAGGCAGATGAGCGGGCAGGTGTCGCGGGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGATGTTGCGGGGCTCAGCTGGCGAGTATCAGGCAGATGATCGGGCAGGTGTCACGAGATTCAGCTGGCGAGTATCAGGCAGATGAGCCGGCAGGTGTCGCGCGGCTCAGCTGAGGAGTATCAGGCAGATGAGTGGGCAGGTGTCGCGCGGATCAGCTGACGAGTATCAGGCAGATGAGCCGGCAGTTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGGATCAGGCTGATGAGCGGGCACGTGTCGCGTGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCACCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCCATTGGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGCGGGGCTCAGCTCGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGTGGGGCTCAGCTGGCGAGTATCAGGCTGATGAGCGGGCAGGTGTCGCTCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCCGGCAGATGTCGCGTGGCTCAGCTGGCGAGTATCAGGCAGATGAGCGGGCAGGTGTCGCGCGGCTCAGCTGGCGAGTATCAGGCAGATGAGCCGGCAGATGTCGCGTGGCTCTGCTGGCGAGTATCAGTCTGATGAGCGGGCAGGAGTCACGCGGTTCCGTTGGCGAGTATCAAGCAGATGAGAAGGCAGG TCONS_00138667 TCONS_00138672 . 3' 73776 TCONS_00138667 TCONS_00138672 . 3' 74913 EMBV3_10395 CCGAGTTCTGCCCTTCGGGAGATCTGCCTACTCAACGCCACAGGGAGGGACCTGCTGCAG Variant GeneID:281066|CDK5:NM_174017:556_cdna 211^810 2 EMBV3_08767 GeneID:281066 4 GENE CDK5 MGC140720 cyclin-dependent kinase 5 EMBV3_00558 TTTCCCAGGCACTGAGGTCCCTGCTGCTGTTGGGCCCAGCTCCTCGTGCGAGTGAATAAA Gene GeneID:789590|ZXDC:XM_002697153:94_cdna Constitutive 2 NULL GeneID:789590 22 GENE ZXDC NULL ZXD family zinc finger C EMBV3_12545 GGAGCTTGGCTGAGGGTCTGGGAAATGAGCAGGGATGGAGGAGAATGTAGATCAGGTTTA Gene GeneID:618793|FOXO4:NM_001101277:83_cdna Constitutive 0 NULL GeneID:618793 X GENE FOXO4 NULL forkhead box O4 EMBV3_29499 CAGTGCCCTCACTGTAGAATTTAAAAGCCTTACTGTTGATTGCCCATGGTGGACTTGATG Gene GeneID:785911|ROCK1:XM_002697789:373_cdna Constitutive 0 NULL GeneID:785911 24 GENE ROCK1 NULL Rho-associated, coiled-coil containing protein kinase 1 EMBV3_33157 GGGTTTGAGGAAGCCCAGCAGAACTAGCACTATAGGAGACCTTTCTTTCCACATAGTTTA Gene BVV0102_105720 + 1 EMBV3_31141 GK000002.2:119991388-119999139 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111936 1 XLOC_067835 NonCoding TCONS_00111936 XLOC_067835 NonCoding NonCoding - 2:119994327-119995711 - TSS83557 1384 1 TCONS_00111936_1 90 0.383670520231214 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000896928265369511 0.000443847805000494 0.000253809842550799 0 0 0 0 0.000232002603572534 2.4226364309937e-05 0 0 0 6.94016209683777e-06 0 0 XM_005225612.1 GSTO2 PREDICTED: Bos taurus glutathione S-transferase omega 2 (GSTO2), 1e-39 168 77.09 0.16257225433526 0 noncoding 0 0 0 0 0.0961740073262262 0.580708916500549 0.00925212978027637 0.844435074223138 CCTTAATTGTCTGGAACCTCAAGGGCTTCCTTAGTCCTGAGTGTGTGTCCAGGAAAAAAGTCTGAGCCGCCCTCTGCAGCTGCTGCCTCTCATCCCACACGGTGACACCCTGGCCCATAGGCCCCCACAGTCCTGTGGACTCTGAGGCACAGTCTTCCTGACAGAGGCTGTAGCGGGCCCCACGATTCAGAGACAGAATGATTCTCTTAGTCACCCTCGCTTGCTCTTCTCCAAAGAGCAGAAGCAGCCAGCTAGGAGCGCTGGGTCCTGAGACTCCCAGTCAGTGACACAGAGTTTGGGGGGACCCTACAAATTCACTCAGGTTCTGTCACTGGGAAGCAACTTTCCAGGGCTGCTGGTAAATTTTAGATAAATTTTAGTCAGTCTCAATCAAATCCTGGGGAACAGGTTGGGGGGAAGGGGAAGTAGGTCTCAAACGCTTTCCTCCCCAAAGACCCCCAGCTTGAAAGGCAAGACGCTTCCCCCCTGCTTTCCTGCCTCCAGTCCTGCATTCCTAAGGGGTCTGCGGAAGAGGTGGCTTTGTCAGGCCACAGAAGGTCTCCTGCCAGGCAATGGGTGCTGCTTGGCCACATTTACATAACTAAAGGAGACCACTCAAAGAACTCTACCCTTAACAAAGAAAGCCTGTTCTGGGGAGACTCGCTCTGTCCACCTCAGCAGGGAGGGAAGCTTCTGTGGAACCGGTTATAGACGAAGACGACTGTCAAGTGAAGAAACGGAGGCTCCCGAGAGTAGGGTCCCATGGCACTTGTGTGACCAAGCACTGTCTGAACGCAGTCTCTGCACCTAACCCCCCACCCTTTTGTCTCCCAGGAACCTCCATGTGTATTTGTGGGGTTTTGCCTGACAGTCCCCAAAGTAGAAAAATGTAGTGTCCCGTGAGTGACTGGAAACTGGGTATTTGGGGTTTGAGGAAGCCCAGCAGAACTAGCACTATAGGAGACCTTTCTTTCCACATAGTTTAAAAAAATATTGTGAAGACGAGCTTCTCTGTTTAGTGGAACACTATACATTGTTTAATACACAACCCCCAAGCTGTCTGCTTCTAGCCCAGTTCATGGTCTTGGAGCTATTCTGCACCTTTTTTAAAACCACAGAAAACAGGGGAGGGATAAATTGGGAGTTTTGGATTCATATACACACACTACTATATATAAAAAAGATAAACAACAAGCACCTACTATATAGCACAGGGAAGTATATTCAATATCTTGCAATAATCAATAATGGAAAAGAATCTGAAAGAGAAGATTTATATTCAAAACTAAATCACTCGACTGTACACCTAAAACTAACACAGCTTTGTAAATCAACTGTACTTCAATTTTAAATTTTTCTAAAATAAAAAATTTTTAAGAAATAT TCONS_00103530 . 3' 3459 TCONS_00103530 . 3' 4842 EMBV3_02203 CGTGAAAAGGCCTCTGGGTAGGATTGGGGTGTTTCTGGATTATGACAATGGAACTGTGAG Gene GeneID:521567|TRIM64:XM_002699013:48_cdna Constitutive 0 NULL GeneID:521567 29 GENE TRIM64 NULL tripartite motif-containing 64 EMBV3_42612 GGCCAGGCAAAGTCCAGAAGACACCCGTGGCAGCATCATTAAATTATCACAAGCCCTGAA Gene BVT0102_317733 + 0 NULL GK000026.2:33003350-33093954 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152155 TCONS_00152160 TCONS_00152156 TCONS_00152154 1 XLOC_092262 Coding TCONS_00152154 XLOC_092262 Coding Coding GPAM 26:32963398-33031166 j TSS113541 6611 1 TCONS_00152154_7 825 0.0340341854484949 21 0.902755028258592 2.87861603537613e-05 3.37482963910001e-46 6.9120208564313e-44 5.64111555696764e-05 0.000274511564488693 5.54442149974613e-14 1.30631296246901e-05 4.50921350466094e-13 1.44458604044514e-17 2.66622414740029e-26 5.96526874904429e-36 2.57245998270824e-14 2.40587456189177e-15 5.93559328227067e-11 1.08946485680812e-18 0.000857406526451387 0.000211837051649538 0.000104667256025689 1.60856396942615e-05 6.25605490924044e-62 2.17160087541485e-46 0.000365731035597289 5.39332530437903e-114 3.9505108778787e-48 1.5876377617125e-05 6.12758836820587e-15 7.17455935282086e-05 6.97890596077596e-09 1.67575361344991e-14 1.36213803574395e-05 XM_005225722.1 GPAM PREDICTED: Bos taurus glycerol-3-phosphate acyltransferase, mitochondrial (GPAM), transcript variant X3, mRNA. 0.0 1.109e+04 100.00 0.929662683406444 XM_005269998.1 GPAM PREDICTED: Homo sapiens glycerol-3-phosphate acyltransferase, mitochondrial (GPAM), transcript variant X1, mRNA. 0.0 5330 79.11 0.929511420360006 TCONS_00152154_7 sp|Q5GJ77|GPAT1_BOVIN GPAT1_BOVIN Glycerol-3-phosphate acyltransferase 1, mitochondrial; 0.0 1691 98.91 0.998787878787879 1 coding 0 0 0 0 -0.0685794489726128 0.69391037115658 -0.0210488851416344 0.744366453903915 GCGAGCTTCACTTCCTAGTCAGAAAGCCCGGCCAGGCAAAGTCCAGAAGACACCCGTGGCAGCATCATTAAATTATCACAAGCCCTGAAACTCACTCCGGGATGAATGAGAAGCCTGGGTCTGTTTGTCCTTGCAGTGGGAAGGGAGTATGTGATTGGCCGGCTGGGCTCGGCCTAGCAGGCCTTATCTCTGGCTGGTTATTATTTGATCAAAGGGGGCTTCCTCCTCCTGTAGTGTTTGACAACTGTGTTGGGAGAGTTTGTTGCTGCCTGGGGATTTTTTTTTTTTCCAAGGTTACTACTGAGCACCCAAAGTCCTTCCATTTCTAGCCATACAAACAAGCACCCAGAGGAGATTTTCTTTCATTCCCCACTCAGACTGGGGCAGTCTTCTTCAGAATCTCCATCGGCTTTGCTCATCAGCTGTTTGGAAGTAATTCCTCAATCAGCACAGAGTCAAGGATACAGCACATGATTCGGGAGTTACGCTGTGTGACATGGATGAATCTGCATTGACCCTTGGCACGATAGATGTATCTTATTTGCCAAATTCTTCTGAATACAGCATTGGTCGGTGTAAGCATGCCACCGAGGAATGGGGTGAGTGTGGTTCCAGGCCTACTGTCTTCAGATCTGCAACCTTGAAGTGGAAAGAAAGCCTAATGAGCCGGAAGAGGCCCTTTGTGGGAAGGTGCTGTTATTCCTGTACTCCTCAGAGCTGGGATAAATTTTTCAACCCCAGTATCCCGTCTTTGGGTTTGCGGAATGTTATTTATATCAATGAAACGCATACAAGGCACCGAGGGTGGCTGGCAAGACGTCTTTCTTATGTGCTTTTCATTCAAGAGCGAGATGTCCATAAAGGCATGTTTGCCACCAACGTAACTGAAAACGTGCTGAACAGCAGTCGAGTACAAGAGGCAATTGCAGAAGTGGCTGGTGAATTAAACCCTGATGGTTCTGCTCAGCAGCAATCAAAAGCTGTGAATAAAGTGAAAAAGAAAGCCAGAAAGATCCTTCAAGAAATGGTTGCCACCGTTTCACCGGCAATGATCAGACTGACTGGATGGGTGCTGCTGAAACTGTTCAACAGCTTCTTTTGGAATATTCAGATTCACAAGGGTCAACTTGAGATGGTTAAAGCTGCGACTGAGATGAATTTGCCGCTTATATTTCTGCCAGTTCATAGATCACACATTGACTATCTCCTGCTCACTTTCATTCTCTTCTGCCATAACATCAAAGCGCCGTACATTGCTTCAGGCAATAATCTCAACATCCCCATCTTCAGTACTTTGATCCATAAGCTTGGAGGCTTTTTCATACGACGGAGGCTAGATGAGACGCCAGATGGACGGAAAGATATTCTCTATAGAGCTTTACTCCATGGGCATATAGTTGAACTACTGCGACAGCAGCAGTTCTTGGAGATTTTTCTGGAAGGCACACGCTCAAGAAGTGGAAAAATCTCCTGTGCTCGGGCAGGACTTCTGTCAGTTGTGGTAGATACGCTGTCCACCAATACGATCCCAGACATCTTGATAATACCTGTTGGGATCTCTTACGATCGCATTATTGAGGGTCATTACAATGGCGAACAACTGGGAAAACCCAAGAAGAATGAGAGCCTCTGGAGCATAGCAAGAGGCGTTATCAGAATGTTACGAAAAAACTACGGATGTGTCAGAGTGGATTTTGCACAACCATTTTCCTTAAAGGAATATTTAGAAAGCCAAAGTCAGAAACCTGTTTCTGCTCCACTTTCTTTGGAGCAAGCATTGTTGCCAGCTATACTTCCCTCAAGACCCAGTGATGCTGCTGACGAAGGTACAGACATGTCCATTAATGAGTCCAGAAATGCAACAGATGAATCCCGCCGAAGACTGATTGCACATCTGGCTGAGCACATTCTCTTCACTGCTAGCAAGTCCTGTGCTATTATGTCCACGCACATCGTGGCCTGTCTGCTCCTCTACAGACACAGGCAGGGAATTGGCCTCTCCACATTGGTGGAAGACTTCTTTGTGATGAAGGAGGAAGTCCTGGCTCGTGATTTTGACTTGGGTTTCTCAGGAAATTCAGAAGATGTAGTCATGCATGCCATACAGCTCCTGGGAAATTGTATCACAATCACCCACACCAGCAAGAATGATGAGTTTTTTATTACTCCTAGCACAACTATCCCATCAGTCTTTGAACTCAACTTCTACAGCAATGGGGTGCTCCATGTCTTTATCATGGAGGCCATCATAGCCTGCAGCCTTTATGCAGTTCTGAAGAAGAGGGGCCCAGGAGGACCCGCGTCTCCCAGCTTGGTCAGCCAGGAGCAGCTGGTGCACAAGGCTGCCAGCCTGTGCTATCTGCTCTCCAATGAAGGCACCATCTCTCTCCCCTGCCAGACCTTTTACCAAATTTGCCATGAAACAGTGGGCAGGTTTATCCAGTATGGCATTCTTATAGTGGCGGAGCAAGATGATCAGGAAGATATCAGTCCTGGTCTTGCCGAGCAGCAGTGGGACAAGAAGCTTCCGGAACCTTTGTCTTGGAGAAGTGATGAAGAAGATGAAGACAGCGATTTTGGTGAGGAGCAACGAGATTGCTACCTGAAGGTGAGCCAGTCCAAGGAGCACCAGCAGTTCATCACCTTCCTGCAGAGGCTCCTCGGGCCTCTGCTGGAGGCGTACAGCTCTGCCGCCGTCTTCATTCACAACTTCGGCGGTCCTGTCCCCGAGCCTGAATTCCTGCAGAAGCTGCACAAGTACCTGATCACAAGAACCGAGAGGAGGGTTGCCGTGTACGCTGAGAGCGCCACTTACTGTCTTGTGAAGAATGCTGTGAAGACGTTTAAGGATATCGGGGTTTTCAAAGAGACCAAACAAAAGAGAGTGTCTGTTTTAGAACTCAGCAACACTTTTCTACCTCAATGCAACCGGCAAAAACTCCTGGAATATATTCTGAGTTTTGTGGTGCTGTAGGTAACTTCGGGCACCTCTGGCAAGTGAAGGGAGCGGGACCGGTTCCTCGTAGGCCCCGCCTGTGGCACGAGAGTGGACGGCGCCACCGTGTGGTCGGGCCTGACCTGTCCTGACGCGACCTCCTGGAAGACAAGTGCCTTCTCCCCTCCGTGATCTGTGATCGCTGGGCACTGAGGTGACACGCAGCCTGCAGATCACACCACGGGGGCCCCAGCCTCCGTTTGCAGTTCACGATCAATAGATTGCAAAATGAGATTTTGGAGTTTATTAAAGATTTACATTCTAAATATAACAGTTAGGGACTTATTACTGTGATGGACACACAAATGTAGTTGATTCTAAAACTGAATCTTGTTTAGTACACTTAATGCTGTCAGGTAATTTATTAGTATATGTTCTGATTAATGCTTCCTTTAAAAATAATTGAGTCATCCATTCACCGTTTTTTGTTTTTTTCATTTTTTTCTGTTTTTTTTCGGTTTTATCTATGTCAACTGTAGCTAACTGTTAAATGGGAGCATTTTTTTCCCTCACAAAGTGCTTTACAAATGAATGGGCTATTCACACATAGGTGTCACTGTGCTGTCTGTTGTAGTCAGGTATAGAAGTGTTTAAGAGCTAAATGAAAACACGATATTAATTTAGGTCAGAAATAGAGATAATCTGACCAGTCAGCTTGTACCAGGAAATAAATTTGGCTGGTGAAATTCAAGATAAACTAAGCCGGAAAATTGACTTTGAAAATGTTTGCTCATGTGAAAAAGTGCCATTGAGTTTTAAATGACAGGCAAGTGTTTGGGAGCAACTCCTGTTTCGTGTCTGTGTCACTTCCCTGCCACCCTCCGCCCACCTCCTGCCTCAGGCAGTACCTGCCTCTCAGGTACAGTTGTTTCTTGGAGATAGCAACTGTTCTAACCTATTAGCTTGGCCTGATTGCCTGTGTAAGTGTGAAGCACTCTGGCTGCAGCCTCATGGCCCAGGCCTCTTACGTCCTGTAGACTGGTTGTACGCTTTTGAGTGGCTGGTACCCACTCAAGTTGGGCAGAGTACCAACCTGTGGGTTGTACATCACATATGTGATGGCCCTGCGGACTGGCATTTGTAGATGTTTTTAGCTTTGAGAAAAAGAAAACCATGGTTCTTTAAAAATACGCATGGGTTATTTTCCTAAACCCTGATGCCATATAGTGGCAGATAATTATGAAAAATTGTTCATAACAGGTAGGTGCCTTTTTTGTGAGCAGGGATCGTAATTGTTCACTAATTGTGGTAATGATGGTGATTTCTTAAAGATCATGTGATAGAAAACGTTTTCTAACAGCTGACTGTTTCTTTTTCTCTCCGTAGTATTATGGAATTAGGAATTTTTCCAGACAAATACTGCAGGTAATCTTTGAATTTAATAGAAAGGTACTGAGAATTAAGTTTGTACTTTTATCAGCTTGGATTTTAAACACTAATAATGTCTTGTGAGTATTCTGTGTGTGTTGGGAGAGGGAAAAATACTGATTGGTGTTTCACATTGTATGAAATTTTTGAAACTCGGAGCAATAATGCCATGCCGTTGTGATTTTCTTCCACTCTTCTCAAATTCCGCATTTAAAACATGTTTCTTTATAGGAGCTCACATCCCATTAAGCCTTGTCAGTGTTGCAGCGGCTCTGATGTGGGGTGGGATCTTCACTGTGTTACATTCCATTTTACATTCGAAGTAGGATTGAGCTCTGTGTTTTGGGGAACAGCCAGGGAAGCTTATTTATCCCCTTGTGTGTTCCTTATCTAGGTAAGCAAACGTTCCACTAGTCTTTTTTACTCATCCATGAAATTGTAGACCAAGGGTTACTCAGACTGTCTGAGTCAAGGTTGGGACTGACCTCTCTGGACTCTGCTGCCCCCGCCTGTGACTTCCACTAAGAGCTGCTGCTCCGCCAGCCTGAGCAGGAGCAGTGGCTTCTCTGGCTCTAACTTGCCCTTTCAGTTGGTTTGTTTTCTAGAAATCTACTCAGATGCTTTGGGGAATGCAATGTATGATTTGCTAGCTCTCTCACCACTTAACTCACTGTGAGAATAAATATGCATGCTTTCTGTAATTAACTGGTGCTTTGAAAACCTTTTTTAAGGAAGACAAATCTCAACCAAAGTTCTGCTCATCCAGACAAGCTCACCCTCTAGTTAATTTTAGCACAGCTCATTCTTTCGTGCCTCGTTACTGAACAAACATCCATCATCCCAGTAAGGCTTCCAGATACCACTGTTTTGCTAAAAGATTTATTCTCCTTGTTTTCCAAAAGCGAATGGCTTTCACGTAAGATTAAACGAACTAGGTGCTTGTAAATAATTTATTACCGTTTACTGCATTTCTATAATACTGAAATGCATGCCCTCCAGGGGAAGACAGACTGTGAGTCGAGTTAAAAAGCAAACAAAAGGACCCAATAATAAGCAATATGAAGCTACACTCTTTCAAAATGAGAAAGTCCTAAGAAATTCAAGAAATTCCTCTTAAGAGGAAGGAAGTAGCGTGAGGTGTGTAGAACTAGTAACAGAGAAAGGACCACAAGTCTGAAGTCTCTGAAGTCATGAGGGTGACGAGAAAACATACCAGGGACCGCGGTGAGTGTAAGCTCAGGTTGTGGCATTTCCAGTCTGAGGAACAAACCATTTCCCAGAGTTCTCCGTGTGTACGAAGGCTCTATGAGATGTTCCTAGGTGTTTTGTAGAAAAAGTGTTGCTGATAAAATTAATTTGCACATGAACCCTCATTCCTAGAAACTCACAGTGCACTTTAGCACAGTAAGGGCTCAGGGCCCGCCGGTCCCAAGCCTGTATTAACCCAGCATTTCCGAATCTGTGCGACCCCAGAGCCTTTTTCCCCTTTGCAACACCCCTACGGACCTCTCCTGAGGTTCACAGAAAACATTCCGGGAAACACTATGTTATGTATTTCTGTAAGAGGACAAGACAGCAACTGCAACAGAGGCACATCTGCATCGTCTTGTACGATCAAACATTGTGTTTCATGGATGTGTACTTCCTCCTCTGGAGACAATAAGCACAGGAAACTATCATATAGGTGGTCAGAACTCTTCGATGAAAGATCAGCCCTCAATGTGTCTGGGTTTTTACCTGAAAGGAGCAAAATTAACACTAGGATTAATTGGGGTAAAAAATTAAGATTTTAAGTCAGACCTGGCAGAAGACATTGCACAATCAAATGCAGCTTTTTATCCACAAATAGTTCTAGTGTTTAGAAATGACAGGACCTACCGCTGAGGTTCATAAGACTTAATTTGGATGTCAATCTGTTTTTTAAAGCACTCTTTTTAGGAACTTGAGACTTGGCATCTGGCATTTCAGTTTAATATAAAATGATGGCATTTGAAAGAGACTTTCAACTTTATTTCTAAACATCTAGAGTTCTGAAATGCCTTGATGGAATATGTTAAACTGTTTGCCTGTTGTACAAAGAAATGTTAGATTGTTGTAAAAAGGCTGATTATAGAGTACCATAAAATAGCATGGTGTGATGATGTGAATGAACTGATTTGGAAATGTGGATTGATTTTTATGCCTGTTAATATATTGTAAGAAGCACAGAGGTGTAGCTTTGTTTTAATAAACCAAAAAGTGAATATAT EMBV3_43132 GAGCACTGCCTGGTAGCCAATCACGCCAAGATCTGTTCCACTGGGCCTGCCTCAATGAGC Variant GeneID:613442|ZFPL1:NM_001076272:104_cdna 266^377 1 EMBV3_32004 GeneID:613442 29 GENE ZFPL1 NULL zinc finger protein-like 1 EMBV3_27888 CGAGTGTTCTGTGAACCAGAATTCAATCAGATCTTGCCTAAATCATCCAGACAGAAAAAT Variant GeneID:767990|ATXN10:NM_001077051:15_cdna 342^521 2 EMBV3_29101 GeneID:767990 5 GENE ATXN10 MGC133945 ataxin 10 EMBV3_25510 GACTATTCCTAGGCATCCACTTTCCTAATGAACATGAGGCTGGGCTTCAGTGCCGGATGA Gene GeneID:533900|RFX4:XM_002687661:33_cdna Constitutive 2 NULL GeneID:533900 5 GENE RFX4 NULL regulatory factor X, 4 (influences HLA class II expression) EMBV3_18941 CTCTATGCTCTCTATGGAAAAAGTGGCAAGATGCCCGTGAAAGATGAGAGAGGTGACCTG Variant GeneID:513632|RCBTB2:XM_002691783:390_cdna 50^132 1 EMBV3_41336 GeneID:513632 12 GENE RCBTB2 NULL regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 EMBV3_40303 ACATGGACCCAAATGTGTGACATAAGAGATGTGTTTTGCTGCTCAACGCTGTCCTCACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43215 CTTGGATCTTAATGAAATGTTACCAGGATCAAAAATTGGGAAATTAAGCTCTTTAAGGTA Gene GeneID:532257|USP24:XM_002686388:225_cdna Constitutive 2 NULL GeneID:532257 3 GENE USP24 NULL ubiquitin specific peptidase 24 EMBV3_08947 TCCGGGGTGGCCTTCACCAGCGCCAAGGAGATGGTCAACGCCTCCAGAAGCATCGAGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25369 TAATCAGGGAGGTCCCAGCTGTTAGGGGGAAGGAGTTTGAGCCTGTATGAATTGAGGCCT Gene BVT0102_086353 + 0 NULL GK000023.2:15610702-15616806 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134201 TCONS_00132482 2 XLOC_081338 XLOC_080790 Coding TCONS_00134201 XLOC_081338 Coding Coding USP49 23:15610964-15696754 j TSS100097 8299 1 TCONS_00134201_5 679 11 0.903390877618343 0.000314048459214559 0.000384496248749401 0.000222483470806407 0.000487096861955911 0.000796966099904036 0.000197379536228384 0.000331084799428026 0.00030732331687892 0.000329013556796214 0.00087308225058595 0.000417239775238542 0.000289557368949392 8.98684464895573e-05 0.000259939925312746 4.74243195876686e-05 0.00168003467556936 8.20521088246715e-05 0.000217191855424744 0.000160679140645335 0.000498547097303287 4.96331611400874e-06 0.00118779969363566 0.000399539315242607 0.000392110462278066 0.000280339863230982 0.000400839899530912 0.000265501126449607 0.000244443609815736 0.000167488474334496 0.000603581392884746 XM_005192931.1 USP49 PREDICTED: Bos taurus ubiquitin specific peptidase 49 (USP49), 0.0 9901 100.00 0.661404988552838 XM_005248991.1 USP49 PREDICTED: Homo sapiens ubiquitin specific peptidase 49 (USP49), 0.0 2857 89.86 0.254127003253404 TCONS_00134201_5 sp|Q70CQ1|UBP49_HUMAN UBP49_HUMAN Ubiquitin carboxyl-terminal hydrolase 49; 0.0 1231 91.39 0.982326951399116 3 coding 1 1 1 1 0.00486652669827303 0.963336038966441 0.0209442341414648 0.672746279469008 CTCTCTTTAGTGAGGTGGTTTCACCTCGTGTGGGCTGCTGGAGCACACCGCATTTCAGTTGTTTGATCCTTCCATCCTCCTGGCCCGACACCATGGGAGTGACTTGTGTGTCTCAGATGCCCGTGGCCGAGGGCAAGAGCGTCCAGCAGACTGTGGAGCTCCTCACCCGGAAATTGGAGATGCTTGGAGCAGAGAAGCAAGGAACATTTTGTGTGGACTGTGAGACCTATCACACAGCTGCCTCTACCCTGGGCAGCCAAGGTCAGGCCGGGAAGCTGATGTATGTGATGCACAATTCTGAGTACCCTTTGAGCTGCTTCGCCCTCTTTGAGAATGGCCCTTGCCTTGTTGCCGACACCAACTTTGACGTGCTCATGGTGAAACTCAAGGGCTTTTTCCAGAGTGCCAAGGCCAGCAAGATCGAGACCCGGGGCACCCGTTACCAATACTGTGACTTCCTAGTGAAGGTGGGCACGGTCACAATGGGGCCCAGTGCCCGAGGCATCTCCGTGGAGGTGGAGTATGGCCCCTGTGTGGTAGCTAGCGACTGCTGGAGCCTGTTGCTGGAGTTCCTGCAGAGCTTTCTAGGCAGCCACACCCCAGGGGCGCCCGCAGTGTTTGGGAACAGACACGACGCTGTCTACAGCCCAGCAGACACCATGGTCCAGTACATGGAACTCTTCAACAAGATCCGCAAGCAGCAGCAGGTAATAGAGACGAGGAAACCTAACCAATGACTGTGGAGTAATATGGAAGAAGATGGGAAAAACTTGTTTAATGGGTTGAAAGAGTGGAGCCTTCCCTAAGACATGGATAGATGCAAACATGTAGGGCGGTTGCGGCTCGCCCAGGACCACTCCATCCTGAACCCGCAGAAGTGGTACTGCCGGGAGTGCGCCACCACCGAGTCGGTGTGGGCTTGTCTCAAGTGCTCGCACGTGGCCTGCGGCCGCTACATCGAAGATCATGCCCTCAAACACTTCGAAGAGACCAGACACCCGCTAGCCATGGAGGTCCGGGATCTCTACGTGTTCTGCTACCTGTGCAAGGACTACGTGCTTAACGACAACCCGGAGGGGGACCTGAAGCTGCTGAGAAGCTCCCTCCTGGCGGTCAGGGGCCAGACGCAGGACCCGCCGCTGAGGCGCGGGCGGACGCTGCGGTCCATGGCGGCGGGCGAGGACGCAGTCCCGCCGCAGCGCGCTCCCCAGGGACAGCCGCAGATGCTCACGGCTCTGTGGTACCGGCGCCAGCGCCTGCTGGCCAGGACGCTGCGGCTCTGGTTCGAGAAGACCTCGCGGGGCCAGGCCAAGCTGGAGCAGCAGCGGCGGGAAGAGGCGCTGGAGCGCAAGAAGGAGGCGGCGCGGCAGCGGCGGCGCGAAGTGAAGCGACGACTGCTGGAGGAGCTGGCCAGCGCCCCCCCGCGCAAAAGCGCGCGCCTGCTGCTGCACACGCCCCGCACCGCACCGCTGCGCGTGCCCGCCCCGCGCGCGCCCGCCGGGCCCCGCCCTGCGCCGCGCCGCGCGCCCGCCATGGCGCCCGGCGTCACGGGCCTGCGCAACCTGGGCAACACCTGCTATATGAACTCCATCCTGCAGGTGCTCAGCCACCTGCGCAAGTTCCGCGAGTGCTTTCTGAACCTCGACCCGTCCAAGACGGAGCAGCTGTTCCCCAGGGCCGCCAACGGCAAGGCCCCGCTCTCAGGCAGGCCAGCCAGCAGCTCGGCCACAGAGCTGTCGTCGACCCGGAGTGATGGGGCCGAGGCCTGCGAGCGCGAGGGCCTCTGCTTGAACGGTGGGACCTCCCTCAGCAGGAGCCTAGAGCTCATCCAGAACAAGGAGCCCAGCTCGAAGCACATCTCCCTCTGCCACGAACTGCACACCCTCTTTCGCGTCATGTGGTCGGGAAAGTGGGCCCTGGTGTCGCCCTTCGCCATGCTTCACTCGGTGTGGAGCCTGATCCCTGCCTTCCGCGGCTACGACCAGCAGGACGCGCAGGAGTTTCTCTGCGAGCTTTTGCACAAAGTGCAGCAGGAACTCGAGTCCGAAGGCACGACGCGCCGGATCCTCATCCCCTTCTCCCAGAGGAAGCTCACCAAACAGGTCTTAAAGGTGGTGAACACCATATTTCACGGGCAGCTACTTAGCCAGGTCACTTGTGTATCATGCAATTACAAATCCAATACCATTGAGCCCTTTTGGGATCTGTCCCTGGAGTTCCCTGAACGCTATCACTGCATAGAAAAGGGTTTTGTCCCTTTGAATCAGACAGAGTGCCTGCTCACTGAGATGCTGGCAAAGTTCACAGAGACAGAGGCCCTGGAAGGCAGAATCTACGCTTGTGACCAGTGTAACAGCAAACGACGAAAATCCAATCCAAAACCCCTTGTTCTGAGTGAAGCTAGAAAGCAGTTAATGATCTACAGACTACCTCAGGTCCTCCGGCTGCACCTTAAAAGATTCAGGTGGTCTGGCCGTAATCACCGAGAGAAGATTGGGGTCCATGTCGTCTTTGACCAGGTATTAACCATGGAACCTTACTGCTGCAGGGACATGCTCTCCTCTCTTGACAAAGAGACCTTTGCCTATGATCTCTCCGCAGTGGTCATGCATCACGGGAAAGGGTTTGGCTCAGGACACTACACAGCCTATTGCTACAATACAGAGGGAGGTTTTTGGGTCCACTGCAATGACTCAAAGCTGAATGTATGCAGTGTCGAGGAAGTGTGCAAAACTCAAGCCTACATCCTTTTTTACACTCAAAGAACAGTTCAGGGCAATGCAAGAATCTCAGAAACCCAACTCCAAACTCAGGACCCCTTGCAGCACCGGAAGAGCCTCCTGACGTGAGCAGCCTTCGGCAGAGCACTGGAGAGCAAGGAGGGGCCCTGGGCTGGCAGCTTGCTGGACAGGATTGGTTCCAAGGCGGGAGGTGAAGTCAGGACTTTTTCCTACAGAGGAAGTAGTCCTCAAGGGTTGAAAATTTAGAGACTTCCTTTTTTAGGAGATAGCAGTTGAAGAATGGAAGGAGGTGCATGGAGCAAATTTCTCCATGAAAAATGGGAGGTTTTTCACGTGTCATATTCTACCTGGCTGCTGCTGTCATTTAATCATTCCACATCTTCTGAGATGGCACAAACATCCCTTCATTCTAAAGAAGGAGCAGTTCATATGGGGAAGCAAGGAACTGGTACATGACATGCTCTTTGTGGCACACTGAGCCTAAACGCACTCCTGGATACCCAGTTCTGTAGCAAACTCCTGGTTCGGGTCTAGGGCAAGCACATAGTTTGGCTTAAATTGGTCTTTTTAGGTCAGGTTTCTGAAGCTTTCTCAGAACTCAGAGGGGGGCGGTGGGGGAGCCAGTGGTCCAGGGCTTATCGAAATGCCTGTCCCCCGTTCTCACCTTGGTGCAGCATGCAGCTTTTCTTTACCTGCAGCTTATTTCCTGTTCACAAGGTGTGGGAGCTTTTGCTTTTCGAAGGCTTAGGACTCTTCCTCCTATATGTCTGAACAGTTTATTGTTGACAGCCCTGGCCGGTTTCCTCCAAAATCTGCTAATCCCTACGGTTTCTTTACCCACCCACCCTCAGTCCATCAGAGAAAAAAAGTGTCCTGTCCTTCACTTCAGTGCTAGTAAGATATAGCTTTCTTTTTTAAACTGGGTCAGTTTCTAAGTGGCATGAAATTGCCCAGATGGAAGCCCTCTGCCCTGTCAGGCATCACTGAATTTCCCTCCTCAGTCCTTCACTTCGACTCACTAGTAAAAGTGAATGCGTACTGTAACTCCCACTGTGGGAGTGCCACAGCACCTCAGCCTGTCACTCGGGATGCTCATCTTTTGACTGTGTCATACTAACATTCAGTTCAGGTAGAAGTACAGCTGTCACCTGAAGGGAGTAGGTGTGAAGAAGTTTGGGGAGGGGTGAGAAGTTGGGAAATTAGAGGCTAAAGGATGAGGGGTGTAGCTTTAGCAATGTTGAAGGGCCACATTTCCCAAGCAGATCTGTATAGCATTTGCTGTTGACCTCTTTTGAGATGAATTCTCCTATAGGACCTACCAGACAGCACTGAGATTTGGAGGAAATCAGACAGAAGATGGCTCACTGTGATAAGGAAAGGGAGTGACTATACTTTAAATTAAACTTGCTTTTTCCAACACTGTGAGGTTTCTGTAATATTTAGCTTTTATTTGGAAGCGATAGCGTATGGCATTTTTTATGCTATTTGGTTTATATTGTCTACTGCAGGCTTCTTTGTACAAGCTTGGCCCGGGCTTACCTTCACCTGGACACTGTTTTAAAGTGTCACAGCCGCCCATGCTGCCAGAGGCTCTGATACGAGACTACAGTCTCTAGATCCACATTTTTAAGTTGGCGTGATTGGTGATGACCTTTTGTGGTAAAAGAAAAGCGCACTGACTTAAAAAAAAAAAAAAAAGTAAAAAGGGAAGGAAAATATAAATTGTGCCTCATCTTTCACTGAATGCTATATTTATTATTCTAGAAAAAGAGAACTGACAAATAGAGAAATACTATACAGCATCTACTAAATCCCTCAGGCTGTCCCGGGCGGGAGGAATAAGAAAAATAAACATCTCATGGAAAATTAAAACATTTTCAAATTTAATTTTAAAAAAGTTTTATACCAAAAGAATTAAGCAGACTAAGGACTTTGTATTAATAGGGTAAGTGCTTCAAATTAATAAAATCATTTAAAGTGAGTTGGAACAGAAACCAGTACCAGAGTCCTCAAAGAGCTGCACACACTTGAAGGTGCCCCTGCAGTCAGACACCTCAGGTACCCAGAGGCAGCAGCAATAGACGCTGTTGAGAAGTTAGTATTTATGGAGATTTTTATTAAAGAAAAGAATTTCCTGCTGCCTAAGCCAATGGCTTTTGTGAGGGAAATGTCCCTTTGCCTTTAATTTATTTACATACTGGAAGTATATGAGTTTCTTAGTTGCATCTTACTTTAAGTCAAAACATTGTAAAGAAGAAAATAAGAACCAGGTGGAAGTTGACTAGATGCTGCCAAATCAAATCCAAGATCTCCTAACTGAACCTTACGGGCCTGCTTCTCTCCCAGACAAGTAGTTACATCCCTGTTCTAGGAACCCTTTGTGGTTGGCTGGTGTGTTTACTTCCTGCTGTAGCCAGCCAAGATGAATGCACCCTGGCCCTCAAAATTTTACCTCAATCTAGCTTGACCCTCATACTTGTGGTTGCCTCGGAGACAAGCATTCATGCTAGTGTTAAAAAAAATTACAAATGCCCTCAATGGCTAGGAACTGACCCTCTTATTCAAGATGGCAAACCTCTTGCCTGCTTTGATCCAGTCCCTCTCAGGCTGACGGACAGTGCCGCATTGTAAAGAATTTCCAGATGTCTCTTAAATGTCATGAATAAAATTGGGAACTATAGAAGTGTTAATGTGTCCTATGGACTCAATAGCAGAGTTTATTTTTGTTTTTAATGTCAAGGTTTCTAGAGTCAACGATTGTATGAGTTTTCCCCTCTGGCTATGATTACAGTTCCATCCAAGTGTAAGAAGTGATGAAGTGGGTTGGCGGGCAGTGGGCACAGCCCTAGCCAGGTCCCAGCGTAAACGTGAGAGGCTGACAGTAGTACAGAATGAACACTTGGGGGTGTGGGGGTGGGGTGGGGTATGGGTGGGCAGGGAGGGAGAAGGGAGTTTGTTTTATGTACTGATAAAGCTTTGTGAACTAATTTTATACAATTCATAAAATTTGGTGCCTTGTACCTAATTATGGTTTGCATGGGATTGAAAAGATTAAGGGAAAGGATTCTTTCTTGTCATTTCAAGTGGCAAATGGGTCTGTATAGTGTAAAGGACATTTGGTATCACTTTTTAAAAACATTTCGTATCTTGTGTGTGTGAAAGCAAATTATTACCAGCAAGTTCTGAAAATTCTACTGTAATGTCCAAAATCTTTGTGTTTGATTATTCATCAATGTCTCCTTTTCAAGGCAAACTATATACCCTATTCTTTTTTACCACCCCTTATGTTCCGAACATTAACTCAGGCCTTTTTAAAAATCAGGCTGGGAGGGCTTCCCCTTCCTAAACATATAATGTATCCCTATCTAAGGTTTTATCTTTTAAGTGGAAGGGTTACTTTTCCAGCTGGTTGGGAGAGCACAAATGTTCAGAAAAAGGTATTTTAGTTTTTCTAGTGCTAGGCAACATAGTACAAGTCAAAAACCGTTCCTCCTGAAGTGGTACCTTCATTAGTTCTGAAGTTCTTTTGCACAAAGTTTCAGGAAGCAGTGTAAAACACAATCCCCTATATGTGAACCTTTAGATTGTAAGGTAAGCCAGTGCACTGTGTAATATGCAAAAAAGAAGGCTCAAAGAACCTGTCCCAGCAACCCAGTCCCACTGACGGGGACAATACTGAGTAGCTGTGGACGAGAAGACCCGGCCTGCTCACCTGCAGGGCTGTAAACAGCGTGTTCCTTTTACTCCCACCTTAAGGTTTCCACTGAGCTCCTGAGTCTTCACCAAAGGGTGTTTAAAAAGCTTACTCAAAGCACATTTGATAATTGGGTCCCTCAGCCTAATGACTGGCCTAATTAGGTGAGGAGGTTGTATCTTTGGAATAAAACCTCCCACGGCCGCTTAGTTTCCTTACCAGGTAAGTATGCATCTCCCTAGTGGTTGATTCTTTTTTGAAGTTAGCACTAAAATTGAAAAGCGCCTTCTAAATATGACTGTGAGTTTAGTTTCTATCTTTCATGTTTAAATTAACCATTTTCTTGGTCTAGGACTTTGACTTTAACCACTGTGTATTCAACCCAAACACTGCTCTAAGCACACCTCAGTCACTAGAGCACTGAAGTGAATGGTCATTTTTGTGGACTGTTTCCATACTAACTTCTGCTGGTATGTTTCTATTTCAGATCTAACTAGGTAGTGTAGGAGATTTTCATAATAGTGTTAAACTAGCCTGGGCTAAACACCTCATGACAGGATGTAAAACTGACTTCCCTTGAGGAAAAATGTGCTGAAATGGTGAAAGCTAGGATTTTCATTTACAGAATCATAATTATCCATCAAAATTTGGTGTAGATTTGGTAGCTTTAACCTGCTAAATTCTTACCGCTTTCAGGAATTAAGCCAGTTGAAATGAAACTTTACCTTATCAGCTTATGGCTTTATAAACCAACAGCAACACTGTTACTTGAAGCTAAGACATTACAAGTGAAACTTGAATTATGCTTTTGGAAGCTGCCATGTCCTTAATTTTGGCCATGTTTTGAATTTTACCTTTGAAAATTGCTATCAAATAGAACTTTTCACAATTATGAGTAGCTCAGGTAGCAGACTTCAAGGACGTAAGTTTCACTGCTATAAAGAACAACAAGTGCTGGTGTTTCTCAGCTTGGCAGTGGTCTCATGCAGTCTGCTGGGGCTTAAAAGTTTCCTTCCTGGTCACCATTTGGGGGGGTGATGGCTTCAAACCAAAGCCTTACTTAATGTATGTTACTTTTCCTCATCTTAACAGTCTAGTAAGATATAAACTTGTCAGAGCATCTGTGATCCCTATGTAGATTCTTAAAGGGTCCTGACGTCATGTTAAGCCAACCACAGGCCTCAATTCATACAGGCTCAAACTCCTTCCCCCTAACAGCTGGGACCTCCCTGATTAGAGCTCATAAGAAGATGGTGCTTTTCTTTAACATATAAAAAGCCTAATTCTCTTAACGGCTTTCTTAGGTTTATGCCAGCAGGTCAAGAAGGACCATTTTATTCTATTTACGTTTAGTGAACAGACTGCTAGAGATAACGCCTAACTTACAATTAGGCCACTGTGGTATATTTATACTGACCCTCCTTCCCAATTCTTACCCTTTAATCCCATACCAGTTCCAGAGGAGACTTGGCACAAAAAAGGAGTATGTGTATTTTTAAACACCTAGTAGAGCAAATCGACCAGAAAAAATCGCCAAGGGGAGCCTGTCTGTATGTCCACACCTTTCTAAGCCTACATCATTCTTTCCATGCCAGTTCCTTACATACTTCATTTCCAAAGAACCCCAAGCTCCTGGACAGTGGCACTACCCTGAATTTCAGGGTCAGAAAATCTCTCTTTACTTATGAAGGAAGCAGCTTCCGCAAGCAGTGTTGCTTCAGAGCCCACTGTCCAGGCTTCCTCACACCTTGCCTCCATCTGCACATTACTGCCCTCAAATCCCACTGTATTATAGCAACAATGCCTCCCTGGTGCCTGGAAAACCCACCTGGTGCACCAAAATGCTATGCAACACCAAATGGCT EMBV3_08856 ATCACTTCGCTTGCCCTATAGGCCTTCGGAGCTTAACAGCCATTGAGATTCACTCAACGG Gene BVV0102_316864 + 0 NULL GK000009.2:89267538-89307888 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24449 CTGGCTGCACAGAAATCTAGGTTCTCAAGTAATGGGGTGTTTGGATTCCTCCCCCACCAC Gene GeneID:540795|A4GNT:XM_002685051:135_cdna Constitutive 0 NULL GeneID:540795 1 GENE A4GNT NULL alpha-1,4-N-acetylglucosaminyltransferase EMBV3_21342 GAGTGGTATCATCTGAATATCTGAGGTTGTTGACATTTTTCCCAGCTATCTTGCAGCTTG Gene BVV0102_304101 + 0 NULL GK000030.2:97402546-97418916 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36955 TGTGGTTGGTATTGGGGGCCGATGAATTGGGAAGATGCAGAGATGAAGCTGAAAGGCAAG Gene GeneID:540586|SOCS4:XM_002695923:297_cdna Constitutive 0 NULL GeneID:540586 19 GENE SOCS4 SOCS7 similar to Suppressor of cytokine signaling 7 (SOCS-7) (Nck, Ash and phospholipase C gamma-binding protein) (Nck-associated protein 4) (NAP-4) EMBV3_10365 AAGCCGCTACACTGCCCACCGCACCAGCATCTGCCAGGACTTCAAAATCCACAGCCATGT Gene GeneID:528092|LOC528092:XM_002700146:17_cdna Constitutive 0 NULL GeneID:528092 X GENE LOC528092 NULL similar to CSDA protein EMBV3_30934 CCAGGCCTATCTCCATTAACTCTGGACCCTAAAACTGCTCACCCAAATCTAGTGCTCTCC Gene GeneID:618372|TRIM69:XM_002691094:227_cdna Constitutive 0 NULL GeneID:618372 10 GENE TRIM69 NULL tripartite motif-containing 69 EMBV3_08482 AGCTGCGGGGCCCACTTCACGGTTGTTGCCTTGTTCTTCGTGCCCTGTATGTTTACTTAT Gene GeneID:614652|LOC614652:XM_002693589:61_cdna Constitutive 0 NULL GeneID:614652 15 GENE LOC614652 NULL similar to olfactory receptor, family 4, subfamily C, member 3 EMBV3_38009 CCCGACACCATTCTCTCCCATTTACTCCCAGTGGTTTGACTATTAGAAGCGCCCATGATG Gene GeneID:526027|SPTBN1:XM_002691326:475_cdna Constitutive 2 NULL GeneID:526027 11 GENE SPTBN1 NULL spectrin, beta, non-erythrocytic 1 EMBV3_05398 TAGGCGGGACCTTGCTGATTTGTGCACTGGTATGTCGGTCCTCTTCTGTTGCTGTCAGTA Gene BVV0102_129671 + 0 NULL GK000011.2:20899191-20929506 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027166 TCONS_00027167 TCONS_00027169 TCONS_00027165 TCONS_00027168 1 XLOC_015195 Coding TCONS_00027165 XLOC_015195 Coding Coding HNRPLL 11:20927767-20941989 j TSS19320 3487 1 TCONS_00027165_4 237 0.0992256954402065 7 0.755291470360734 8.296279795923e-20 5.94344347532226e-12 6.01128494098176e-05 8.16506869684026e-06 9.11013804544985e-05 3.89782319088278e-12 6.77455420382887e-05 8.90411787659294e-05 6.01042907546216e-06 8.00236453977156e-05 5.76574700705413e-06 1.95074798529343e-05 9.67026870673538e-22 0 9.4406797496904e-11 0.0024086363475597 0.00172409688075027 0.00152172935347673 2.20334242159185e-05 1.60787467761603e-10 1.8718185282768e-39 0.00108180250548034 0.000808617084010547 0.00218652645268816 1.10362675412523e-16 1.96679472244274e-05 2.57024221542145e-05 0.000522553099490952 7.9585803258169e-05 1.87372744195836e-09 XM_005212642.1 HNRPLL PREDICTED: Bos taurus heterogeneous nuclear ribonucleoprotein L-like (HNRPLL), transcript variant X1, mRNA. 0.0 4296 100.00 0.682821909951247 XM_005264641.1 HNRNPLL PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein L-like (HNRNPLL), transcript variant X3, mRNA. 0.0 3052 83.58 0.818755377114999 TCONS_00027165_4 sp|Q8WVV9|HNRLL_HUMAN HNRLL_HUMAN Heterogeneous nuclear ribonucleoprotein L-like; 8e-175 497 100.00 0.9957805907173 3 coding 0 0 0 0 0.0781058167994493 0.822655483143728 0.0136590237901401 0.803156297357604 ATAGCTCAGATCCCATGGTCCATTATTACCTTTACCGAGTCGTTACAGAATGGGCTCTCGAGATACACCTGAGCTTGTTGCCTATCCATTACCACAGGCCTCTTCCTCTTACATGCATGGGGGAAATCCCTCTGGTTCAGTTGTAATGGTTAGTGGATTACATCAACTAAAAATGAATTGTTCAAGAGTCTTCAACCTATTCTGCTTATATGGAAATATTGAAAAGGTAAAATTTATGAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGCGATGAGTATGCTGTAGAAAGAGCTGTCACACATCTTAACAATGTCAAATTGTTTGGAAAAAGACTTAATGTTTGTGTGTCTAAACAACATTCAGTTGTTCCAAGTCAAATATTTGAGCTGGAGGATGGTACAAGTAGCTACAAGGATTTTGCAATGAGCAAAAATAATCGTTTTACAAGTGCTGGCCAAGCATCCAAGAATATCATCCAACCACCCTCCTGTGTGCTGCACTACTATAATGTTCCATTGTGTGTCACGGAAGAGACCTTCACAAAGTTGTGTAATGACCATGAAGTTCTTACATTCATCAAATATAAAGTGTTTGATGCAAAACCTTCTGCCAAAACACTTTCTGGGCTTTTAGAATGGGAATGCAAAACTGATGCAGTAGAAGCCCTCACAGCACTAAATCACTATCAGATAAGAGTTCCAAATGGTTCCAATCCCTATACATTGAAGCTTTGCTTTTCTACATCATCCCATTTATAAGAAGAGACAAGCATGTTAGAATTTATGATTTACCTTTATTACAATTTTAAAGCTACACTTCATTTAAAAAAGAAACTAAAATGGTTAATCTAATGTTGCCTTGCTTTGATTTAAGATTCTGTTCTGTAATAAATATTTTGCCTTGAGTAAATTTGTTGTAAACTTAAATATTGCTTTCATTTTAACATAGAATATCATAATGTAGACTATCTACAGCTTTCTTGTAGATTATACAAATATATGATTTCTAATCTTATTTTTCTTCCACGGTGAAAATATATTTGCATTCTTATGCTAATTATCTGCAAGTATTTTTCCATTGTGTATGAGATTAATGCAGGTGAAAGTATTGCATTTTAATATTATAGAATTCCTATTAGATGTTTAAGTATGTTGCAGTTATTCATATTAAACATGTATTTATTAAGTATTTTAATCAAGTTTGAGAATAACATTGCATATGTTAAATTTTAAGTACTACAGATTTAGCTGATTTTATATTTCTGAAAAGCTAACAGACATGGATACACTTGTACAGTATGCACTCAAACTTATTTAAATTGGTGTATTTTTTTCCTTAAGTCATTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTTCCCGTTTGGCAGTTTTATAAAGTTACAGCAATGAGTTAACGTGTTCATCTTCATTTGTTGCATGTGACTTGATCCTGAAAACACATCTGGTATTTGGCATTGAAATTTTAATAGAAGGTATAATTAACTGTTCCTCTTCTAGATAATCTGAGATCCATGGATGGGCTTTAGGGAGTCTGTGAACTCCCTAAATTTGTATGTAGAATTTTGGGTACTTGCATTTTTATTTTTTACTCTGAAATCCATCAGTAATATATGTATTTTTCTACATGGTACAAGGTATAAGGATCTAATTTTATTTTTATTCCAAACAAATAGCTATTTGTTTCAACGCCATTTATTAAACATTCTTTCTCCCACTGGATCTGGTTTTTTTTTTTTTAAGGAACAAAACGTATCTTATACATAGGCAAGTAAAATGTAAGGACTAAGCATGGTATTGAGAGACTATACTATAACACATCTGTTACCAGGTTCATAGTTTTTTAATAATAGAAAACTGATGCGGGCATTTTATTTTCATCTTTAGTAGAAGGGAGAATATGTTTTATCTATCTTGGGTAACTATGAAATCTATAGTTGGCAATAGCCAATCTCTTGATTCTGAGAGTTTTAAACAAACTTGTATATAGAAGTTCCATTTAGATCTTTTGAAAAAGCTTTATTTTGAATTTTAACAAAAAAGCAGTTTGCCTTAATCCTTTTAGGAATGATGCAGGGGTTTAAAAAAGTTTTAAGAGCTGTTGAATAGAAAGTTTTGATGGAATTAAGCATACATTAACAGTTCTCATTGCATTTTGACAGCAGTGGACTAATGTCCCTTTAGCCTTCTAGGTCTAGAAATTTTAAATTCAATCTAGAAGCATTTTAGACCCTTATGGAACCCAGTAAATTATGTTGAAGGTAACCTGTGAATGAACTTCTGTAAATGTATGGTACTGTGCTGTATACATAAGTTTACCTGACTTTACAATAAATGAAGCTTTTTTTTTCCCTCTTCTATAAATACTTTTCTACATTTGTTGTAAAATTGAGATGTCTTAATTTTAAAAGGTAACTTGTGAGTTTGTGTAATAGTTGTCTCCTTCCCTTGCCCTCTGAAAATTAAGATGGATGTCAGTGTTACAGATTATTTTGTGCCTAAGATTTTAGGAGACAAACCTGTGGATGGTTGACAGGGCTTATTTAATTTATATGTGCTTTAAGTAGTATTGACTTTACATATGAATTCTTTGTAATGCTTTCTCCCCACCAAAGTAACAAGTAGATTCTTCAGATGTAATTGGGGTGGTAGGCGGGACCTTGCTGATTTGTGCACTGGTATGTCGGTCCTCTTCTGTTGCTGTCAGTAATGTTTCTGACAGTTTACTTGGGTTTCACCACTGTGTACGCTTTGGTGACACACCCTCTTTCCTTAGCCTTAACAACAGTCTTGCCTTCGTGATCTTTCAGCTTTTAGGAGAACATGAAGGAGCAGGTTCTACAGCTGCCCTTTTAAGAAATAGTAGCTTGGGGACTTCCCTGGTAGTCCAGTGGCTAAGACTCAATGCTCCCAATGCCTGGGTTCAGTCCCTGGTCAGGATACTAGATCCCACATGCCGCAAGTAAGACCTGACACAGCCAAATAAATAAATATTTTAAAAAAAGAAATGGTAGCTTTGAGTTTATTTTTTTAATACTGAAATTCCATTCCATAGCCAAATCCCATGAAACATTTGATAATAAATCCGTAGAAGTGAGTTACAAAATATTAGCTGCCTTTTAAAATCCCTACCTTCCTGCTGAGGGATTACCCTATCAAATAAAAATTATTTGCAGTTGTAGCTGGCATGAGACTTAGCAGCATCTTAGTGAGTTGATTATCTAAACAGTATGTTTTCTAGGAGTGAACTGAGAGATGAGGGTAAGAATGACTAAATGGGGTCAATAATTATATTTAATGTTTTTACATTGTTCTCTGCAAGGATAGGTTGCTGGGTAACTGCTTCTTAGTAGTTATCAGTGATATTCTCTTTCTAGAAGAAAATTTTTAGTGTAGAACATTGTTCCATAGTAATCTAAAGCATAGATTTGCTTCATTTAAAAAGTTCAGTTGAACTAAAG EMBV3_22725 CAGGGAGCATGACGGGCCTGAAAGTAATCTGTGTTCCCTCCACCCTTTTCAAGTCAGCTT Gene GeneID:353351|BMP15:NM_001031752:33_cdna Constitutive 0 NULL GeneID:353351 X GENE BMP15 bmp-15 bone morphogenetic protein 15 EMBV3_04232 ATCTCCCTTACGATTCCCTCCACTTGCTCACCCGTATGGTGGCTATCTCTAGCTGTAGGA Gene GeneID:539741|RNASE13:NM_001105426:85_cdna Constitutive 0 NULL GeneID:539741 10 GENE RNASE13 NULL ribonuclease, RNase A family, 13 (non-active) EMBV3_23826 GGCACTGGTGGCGGGACTCGATCTGGAAAGCCTATGACCTTCTACTTTGGCTTTAAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13901 GGCCCACATCGTCATCGCTCAAGCCCCTGGCTATTCCAAGGTCATCAAGAAAGTCATCAT Gene GeneID:537837|CPZ:NM_001083486:16_cdna Constitutive 0 NULL GeneID:537837 6 GENE CPZ MGC148805 carboxypeptidase Z EMBV3_22618 GGTGTCTTGCATGCTACTTTACACACAGGGGCTACTTTTACCCTCTCCTTCTGTGGATCC Gene GeneID:787446|LOC787446:XM_002693625:162_cdna Constitutive 0 NULL GeneID:787446 15 GENE LOC787446 NULL similar to olfactory receptor, family 5, subfamily T, member 1 EMBV3_12887 GCTTTCTCCTAAAGGCAAGCAAGGCTTCGAGAAATCTACAGAGATGAAGAGCAGTGAGGC Gene BVT0101_007017 + 0 NULL GK000015.2:15713951-15800045 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060593 TCONS_00060595 TCONS_00060591 TCONS_00060592 TCONS_00060590 TCONS_00060594 1 XLOC_036784 Coding TCONS_00060593 XLOC_036784 Coding Coding AMOTL1 15:15794564-15903964 j TSS45286 8897 1 TCONS_00060593_9 961 0.0666516803416882 13 0.918792676349875 4.24665523160199e-09 0.00067118751621287 0.00104933084632526 2.27362240923086e-07 0.000681188397917123 0.000686406036060156 0.000747341068064572 8.27797619527502e-48 0.000206405603787106 1.73138029890812e-32 1.11715761826131e-11 8.8558166825826e-15 9.76716840661536e-05 0.000175108918535536 6.35994142297706e-06 1.05821510782534e-26 2.13093277986269e-11 5.60080213742087e-15 1.06972814889015e-05 0.000156446896936694 9.64539404599009e-05 5.58371015582032e-35 1.72253019318138e-13 6.22913483503033e-29 0.00111240051949707 0.00109396530821389 3.61708798470245e-10 6.05025137780082e-22 5.88559656985621e-14 1.33805992703613e-31 XM_615060.5 AMOTL1 PREDICTED: Bos taurus angiomotin like 1 (AMOTL1), transcript 0.0 1.566e+04 100.00 0.975834550972238 NM_130847.2 AMOTL1 Homo sapiens angiomotin like 1 (AMOTL1), mRNA. 0.0 4022 80.59 0.48926604473418 TCONS_00060593_9 sp|E1BEQ5|AMOL1_BOVIN AMOL1_BOVIN Angiomotin-like protein 1; 0.0 1837 99.79 0.978147762747138 1 coding 1 0 1 0 -0.0221277620129293 0.880555587198665 -0.0146523776379958 0.802012161100604 TGTGGCATTAGATTCTCAGAGGTGCTCGAACCCTACTGTGAACTGCGCATGTGAGGGATGTAGGTTGCCGGTTCCTTCAGAGAATCTAATGTCTGATGATCTGTGTTGGTGAGGCTGGCCTTGGGGAGTGGCTGCCACTGTCTCCCATCGCCTCCAAATGGGACTGTCTAGTTTCAGGAAAACAAGCTCAGGACTCCCCCTGATTCTGCAGTATGGTCCCCCTCCGGCCTGTTACAGCCCCAGCAGTCCCGTCCAGATTCTGGAGGACCCCAGCTACTTTTTCCCAGACTTTCAGCTCTATCCTGGGAGGCATGAGGCATCTTTGACAGTGGAGGCAAACAGCAGCATCAGAGAAAAAGTCGTTGAGGATCCTCTCTGTAACTTCCACCCCCCGAACTTCCCGAGGATCCCAGAGGTGGAGATGAGAGGTTCCGAGGATGCGGCAGCTGGAACAGTGTTACAGCGGCTGATCCAGGAGCAACTGCGCTATGGCACCCCGACCGAGAACATGAACTTGCTGGCCATTCAGCACCAGGCCACAGGGAGCGCAGGGCCAGCCCACCCCACCAACTTTTCTTCCACGGAAAACCTCGCTCAAGAAGACCCACAAATGGTCTACCAGTCAGCACGCCAGGAACCGCAGGGTCAGGAACACCAGGTGGACAACACGGTGATGGAGAAACAGGTGCGGTCCGCGCAGCCTCAGCAGAACAACGAGGAGCTGCCCACGTACGAGGAGGCCAAGGCGCAGTCCCAGTTTTTCCGGGGACAGCAGCCGCCGCCGCCGCCGCCACAGCAGCAACCGGGGGCCGTGGGGCACAGCTACTACATGGCCGGGGGCGCCAGTCAGAAGGCCCGGACTGAGGGCAGGCCGACGGTGAGCCGCGCCAACAGCGGACAGGCGCACAAGGACGAGGCGCTGAAGGAGCTCAAGCAGGGCCATGTCCGCTCTCTCAGCGAGAGGATCATGCAGCTGTCGCTGGAGAGGAACGGCGCCAAGCAGCACCTCCCTGGCCCCGGGAACGGAAAGGCGTTCAAGGCTGGAGGGGGGCCCTCCCCAGCCCAGCCTGCGGCCAAGATGCTGGACCCCCGAGGTCCTCCACCCGAGTACCCCTTCAAGACCAAGCAGATGGTGTCCCCGGTCAGCAAGACCCAGGAGCATGGACTGTTCTACAGTGACCAGCACCCCGGGCTGCTCCACGAGATGGTCAAGCCTTACCCTGCGCCCCAGCCTGCGAGGACAGAAGTGGCCGTCCTGAGGTACCAGCCACCCCCAGAGTACGGGGTAACGAGCCGCCCATGCCAGCTTCCTTTCCCGTCCACGGCGCAGCAGCACAGCCCGGTGTCCTCGCAGAACTCCTCGGTCAGCGGGCCGTTGCACTCCGTGCCCCTGCCGCTTGCTCCTCCCATGGCCCTGGGGGCCGCGCCGCCCCCGCCCGCCGCCTCGCCCAGCCAGCAGCTTGGTCCTGACGCGTTCGCCATCGTGGAGCGAGCCCAGCAGATGGTGGAGATCCTGACGGAGGAGAACCGCGTGCTGCACCAGGAGCTTCAGGGTTACTATGACAATGCCGACAAGCTCCACAAGTTTGAGAAAGAACTTCAGAGAATCTCGGAAGCCTACGAGAGCCTGGTCAAGTCTACCACCAAGCGAGAGTCGCTGGACAAAGCAATGAGGAACAAACTCGAAGGCGAGATTCGAAGGCTCCATGACTTCAACAGAGACCTCCGAGATCGACTGGAGACAGCCAACAGACAGCTGTCCAGCAGGGAGTATGACGGACATGAAGACAGGGCGGCCGAGGGGCTTTACGCTTCCCAGAACAAGGAATTCCTGAAGGAAAAGGAGAAGTTAGAGATGGAGTTGGCGGCAGTGCGGACCGCGAGTGAGGACCACCGGAGACACATCGAGATCCTAGACCAGGCTCTGAGCAACGCCCAGGCCAGGGTCATCAAGCTGGAAGAGGAGCTCCGAGAGAAGCAGGCATATGTGGAGAAAGTCGAGAAGCTGCAGCAGGCCCTGACCCAGCTGCAGTCAGCGTGTGAGAAGCGCGAGCAGATGGAGCGGAGGCTGCGCACCTGGCTGGAGAGGGAGCTGGACGCCCTGAGGACCCAGCAGAAACATGGCAACAGCCAGCCGGCCAGCCTGCCGGAGTACAACGCCCCAGCGCTCATGGAACTTGTGAGGGAGAAGGAGGAGCGCATCCTGGCGCTGGAGGCCGACATGACCAAGTGGGAGCAGAAGTACGTGGAAGAGAGCGCCATCCGCCACTTCGCCATGAGCGCCGCGGCCACCGCCGCTGCTGAGAGGGACACCACGATTGTCAACCACTCGAGGAATGGCAGCTATGGCGAGAGCTCGCTGGAGGCCCACATCTGGCAGGAGGAGGAGGAGGTGGTGCAGGCCACCAGGAGGTGTCAGGACATGGAGTACACTATTAAAAATCTCCATGCCAAAATCATAGAGAAGGACGCCATGATTAAGGTCCTCCAGCAGCGATCCCGTAAAGATGCCGGGAAGACGGACTCCTCCAGCCTGAGACCCGCCCGCTCTGTGCCATCCATTGCAGCAGCCACCGGGACTCACTCCCGCCAGACCTCGCTCACCAGCAGCCAGTTGGCTGAGGAGAGAAAGGAGGAGAAGACCTGGAAGGGAAGCATAGGGCTGCTGCTGGGGAAGGAGCACAATGACCACGCATCCACCCCCCTGCTGCCCACCCCCTCTGCCGCCACACTCTCGCCCCCAACCCCCGGCACGTCGGCCAGCAGCGCCCACGCTAAGACGGGCAGCAAGGACAGCAGCACGCAGACGGACAAGAGTGCCGAGCTCTTCTGGCCCGGTGTGGCCTCCCTGCCCACGCGCAGCAGGCTCAGCGGGACCCCTTCCAACAGCCCCGTGCTGAAGCACCCCGCGGCCAAGGGCACAGCAGAGAAACTGGAGAACTCTCCCGGCCACGGAAAGTCGCCTGACCACAAAGGCCGCGTCAGCAACTTACTCCACAAGCCTGAGTTCCCCGACGGGGAGATGATGGAAGTTCTCATCTAACCCTGGGCTCCCTGTTGAATTTAACAGTGGAACACCGAGGCGCAAGGAACGTGGCAAAGAGAAAGAAAGATCATGAAGGTTGCGGATGGGAAATCAGGGATGGTTTGAGCAGATAAGGATTTCAGATTAGTGAGAATTCTTTTTATAAATGTTAAAACAAAAACAGAAGACCTACATGACTGAAGATGAAGAGGATGCCGTGGATTTTTCCCGCTTACGGTGGAAGAGAGAAGATGCATGTAGGTTTGGAAACAAAGAAGATCTAGGAAATGAAATTTTTTCATTGTACAGAAAAATGTACCTCTCGGGGAGGGTCTGTGTACACCCACGGTCTGGTTATAAACAGATAAACCTGAGCATGGATCTTCCTTGGAATACGCCCATTCTCCTTGCCTCTTAGCTTGTTTTGAGAAGAACCTCCTAGAAATCTCTCAGTCTGTCTTGACACAACGTCATTTCAACTGTGCCCTCCATGATGTGTCCTGTGAATGCGTGTGGGTGTGGCAGGGAGGAGAAATGTCCAGGGTGATGGAGGGTTTAAAAGGCCATCTCCACCTCTGTACCTGATTGGTTTGGATTTTCAGGAGGTTATGGGCCTTCTTGGCTTTTCTGCACTGAGCAGTATGCAGGATGGGAGCTTTCTGGTCTTGGGGTTCACCCCCGCTCACATCTCTGAGTTCATCTCTGTCTCTGCCTCATTCTCTTTCATTATACCTTTTTTCCTTCATTTTTTTCCCTCTTGTAATAAGCCTTGCAGGGTTCCTTCGGTCTGGGGTTTGCCAGAGCAGTATCTGATGGGTCATCATGCACAGTGACTAGTGGGACAAAGCCTTTTGGTGGCTTCCTGGCAGTTTCCTCCGCCTTGGAGGAGTTGGGCTACAGCAGTTGACCTTCTGACAGTGAACTTGGTCAGCTCCGATGAGACAGAGGATTCATGGCCACTGTGACGTCCTGCATTAAGCTCCTGCCACCACAACTTTCTCCCCTCACATCAGCTCTTGCGTGGAGTTCTGATTCTCCACCTCATTGCTCCGTTGAGGTAGGACTTTCAGGATTGCGCTCCAGGAACCAAGGGACACTTGACTTGGTGGCATCTAGAATCTCCCCTGGCACCTTGTCCCGCTTGCTACTGTTTGTGGCCCCTGCTCTGCCATCCCCTTGAATCCTTCTGGATGTAGTTGGTGAGCACACAGATTCTGTGGCTGTCAGCAGTCAGGTCCGCCCTGCTGGGGACTTGCTTCGTAACCTAATAGGCCAGTATCGATACAGTGTGGTTGGGTTGTTCAAGGGTTTAGTTCGAAGCAACTGGTCCAAAGTAAGACAGAAGCACCAGGTCCAAGAGCCCGGAATGAGTGAGGCCGTGGCCCCCTTTGCCCTGTGTTGTAGGGTTTTGCATCTGACGTCTCAGATGTCGGCTTCCTTTACAAACCTGGAAGGTGCTGGATCAGAGGAGAGAGGCTAGTCAGGCCATCAGATGCCCTTGTGGGGTTCTGATGAATTTGCTGCCTCCGGGCCAGCGGCATTTCTGTCACCCTGGGTCCTCATGCCCATGATCTGAGACTTTCTCGCATCCCACCCAAACGAAGCCCTGAAGACCCCATCACTTCAAAAAGTTGGCTGGGGTAGCTCCTTGAAGGGTTGGTTTTTGGAGTGTAACCTGGGTGCCTGCCTGCCTGCCAAGTCGCTTCAGTCATGTCCAACTCTGTGCAACCCTGTGGACCATAGCCCGCCAGGCTTCTCTGTCCATGGCGATTCTCCAGGCAAGAATGCTGGAGTGGGTTGCCCTGCCACCCTCCCAGGGATCTTCCCAACCCAGGGATCGAACCCGTGTCTTACGTCTCCTGCCTTGGCAGGCGGGCTCTTTACCACGAGGGCCACCTGTGGGGAGCCCTGTAACCTGGGTGAAGCCTCCCCAGATCCACATGGTAGAAGAGGGTGATGAGTGTGGGTGGAGGGAAGGAAACTGCTGGCTTTGCCCAGGAGCTTCTCGGAGCTGCCTGGTGGTCAGAATAAACAGAAGGGATGCACCTCAGGCCCAGCTCTGTGGGGGACTCTGTATCACACATGTTGCCTTCTGCGGTCCCACTTTAAGCGTCACTGAGGGTTGTGCAGCCTGAGGAACCAGAGTGGCTTTGCGGGGCCGAGCAGTCCCTGGTTCTGCCAGAGCGGTGAACCTCATGGGTGGTGCAGGGGCGTGGCGAGTATGGACACATGGGTGTGGTGGGGCAGAGAGCTCCCCGTCCTATCTCTCTTCTCTTTCACTTTCGACAAGTGATGAGGCTCAGTTGATGGCAGCCGAGTCTCTTAAGGACCTTTTGACCCCTGATTAATGTTGAGAAAGGAAAAGATTAGTATCTAGAAATAAGAGGTGCCCCCCCCACTGCTGTCCAGGCCTGGGCCACCCCAAATGTGAGCTGTGTCCCCCAGAAATGGGGGAGAGCCAGAGCCTCGTCTTTAGGCCCCAGCACATCTCAGTGGCAGCACAGGCACGAAGCTTGCTGGCTTTCCTCGGTCCCTGAGTTGCCAGGCCTGGTAACTCTCACAGTACAAGACGTCACCGTTTTTCTACTGTGCTGTGGTGTCTGTCCACCTTTTTTGCTTCTGACCTGCCTCCTCTGCAACAAAAGGGACTTACAGCTTTGAAATCTCTTCTTTTATGGCAGATTTCCGGCCCAGCGAGGGCCTCACTGCTCTTCATCTCTGTAGATTTCTCGAAGCCTTGCTTGCCTTTAGGAGAAAGCAGATACTGAACTCCCCCTGTGCGTTCTCGCCGTTGATGAAACATGATCTCATTGGATTTTTGGAAAAGAATCCTTACTCCATTTTTTAGTGCCAACTGTGTGCAAGCACTGGGTACCTTTCAGTGCATCCTCTGACGACATGGGAGCAGGGGCAGGTTTATATCCTTATTTCACAGAGGAGGAAACGGGTCCAGGGAGGTCAAGTCCCTTCCGCAGGAGAGACCAGCGTCTGGACCGAGGGTTTGGGAGAGCAGCCTTGACGTGGGCCGGACTGCTTCTGACTTGGGGGTGATGAGCGTCTTTTGGGGTCACACCTTGACCCGCTCCATCCCCTGTGCGTGTCTGTGTACATGTGCACACACAAGCAGCTCCCTTCTTCATCCCCCCGACCCTCCAAACTGCTAGGACTGCCCATAAACACAGCTTGGGAGTCTGTGTACTGTTACACTAGGCCACAAAGTCTGTTTTATAAAGCTCTTCTTTGCATGTAATCCAGAGGCCGGGTCTCCTCCAGAACATCCCAGTGTGGTGTCTGACCATGAACTCCTGGGCCCTGTCTCAGGGTGAAGGGTCAAGCCTTGGCCCTGGGTGATGATGACATGCCGGAGTCACCCTGCCTCCTCCTTGAGCATGTCATCTGGCAGTTTCCGCGTGCCACCCAGGGTACCGTGTGGAGCAGGCGATGTCGCTGCTTTCTGGCACTGATTTCCAAGTGTGTGCAGAGCCTTTCCTTGATGTTTTCTTCTCAGCTTGTCTTCGGCTTCCCACAGGTTGGAGGCCAGCCACAGCGTTGCACTGCGCCTGCTCAGAGCGGACACGCAGGACAGGGCTGCCGTGTCCCTCCCGGGACTTGGGTTGGAGGCAGAGAGTGGGGGCCCTTCTTTCTCTCTTTAGGTTTGCGGAGCTTGCTCTTTGGCCACTTGTGCGTTTGACTACACAGGACTTGGGCTGGGTATCCAGGCGTGCCGGAATGCCCCCTGCAGAACAGCCAGCCATCCCTGCTGTTTGTTGTCTCGCGGCTTTGACCTTGTGATGCTGAGTGCCAACAGTTAGAGATGTCTCATGCTTCATCCTCTGCAATGCTGGTGATTTAGTCTCTAAGTCATGTCTGACTCTTGCAACCCCATGGGCTGCATGTAACCCACCAGGCTCCTCTGTCCAGGGATTCTCCAGGCAAGAATACTGGAGTGGATGGCCGTTTCCTTCTCCATTCCTCCTTGGTAGCTGATGGTGATAGAAACTCCCCCCACTGCATCCTGAGTCCCAGAGCCTGGTGTGAACACAGACATGAGAAAAGGCAGGGTTCTAAGAGTAGGTGGCGGGTTGCAAGGTTTGGAGGCAGGGAGCTCACGTGAGCAGAGAGGTGTGTCTTCCAAAACAAAGTCCTACAGCCAGCATATGTGCCCTGGCGCCGGTGGGCGAACTTCTGTGTGCCCCCCGTGATCTCACACTCCTCCTGAGCCAGGGAGGATCATGGCCGTGATATGAGAGAGTCAGAGAGTCTTCTTTAACACAGAACATCCTGTCCAAAACTGCCCGCTTATCCCCAAGCTTGACGCAGCTGCAGTGTATGCTTTACAAATGTTTTTTCTCTTCTCATGTGTTTTTTTGTTTGTTTTTGCTAATTAATCAATGTGTTTAGAATGTCTTCATTCAACATGAGGGTTGTTCAGTGGGTGCCCCTTGTGTGTGGCTCCATGGAAGATGGGCAGAGTCATTAAGAAGTTACCAGAAGCTGATCAGCTGGGAGCATGAAAAGGTTAGCGCTTCAGTAAATAGATTTCTTCTGGACCTAATAAGCAGTTTTTTTTTTCCTCTCGCTTTTAAGTAGCACCCCCTTTTCTTGTTTGGTAATTTAAAGGTATCTAAAGACATGCATTTAAAAAAAAAAGACATGTATATATTGTCAGTGCATACACGAGATGTGGCTCTAAGATTGTATGTCGAGTTTCTTTTCTTAATATCCAAAAGATCCAAGTGTTTCATCTCACCCTGCTTTGTGAGACTCTTGCTGATGACTACAGTGCTGTCCAAGTAGAAACATTCTGTAAACACCTCTGTTAGGATGGATTTGGGGGCCTGACACGTTCCTCTGGTTATCCTTAGAGATGAGGGAGCATCATCCTTTGAGAATGGGTTTAAGATTGGAAATAAACCCAAGTCATTGACTCAGTTGGATAAGTAAAAATGGGTGATGAAGGTAAGTCACATCCTTTTAGCTCTTTCTTTTAAAAAAAAAAAAAGTCCCTAAGATGTTCCTGGGGATACTGCATCTTTGGACTCCTTTCAGAGTGACCACTTCAAAGGAAAACAGTAATCACTAGTACATGTAACTCCCAATGGATTAAAAAAAAAAAAAAAAGCTGCTCTCTTGTCACGCCTTATACGTGTTCACATCTCTGCGTACACACGGATGTAAATGCACATTCATGAGTATCTGTCTGCCTCCAGTCGGAATTCCATAAAACCATGTTAGACTTAAGTGCATGTTATTGTCATATTAGGCCAAAACCGGGGTGTTTCTTTGTCGTGAAAGTTTGCTTCTTCACGGAATTAGAGCACTGTTTTCAGTATAATGGAACCCATATACAACGTTCTCTTGTATCAGCTCTGGAGTTTTGGTGCCCAGTGGTCTATTTCCATGTGGTTTACCTAGAATTCTGTTCACACAGAGACACCTATAAGTATTTATTACAAACTGGGATGTGAACAGACTGACCCATAGTGGTTTTCTTTGATTTAAGGTGTTTTCCCCCTTTGTAGAGCGGAATCTGGGACGTTCTGTGAGGCAGGGCGGGTCAGGCACCCACCTCGGCCAGAACCCTGCTGGCTTGGGTGCCACTGCGCTTCCTGCCAGGTGCGTGTGCTGTATTCTCTCCAGCAGACTCTGATGTATCATTGTGGCATCTTCGTATGGCTGGTCTGTCCTGGGGGGGCGGGAAGCCCAGAGCTGCAACGGCCGGATGGGTCTGTGTACAGAGCAGGGAAATTCAGGAAGACGGTTGTGTCCCCCACAGCAAATATTGATCCTGTTGGTCAGCCAAAGATTTTCCTATCCTTTGCTGCTTAAATTTGTGCCTTAATATTGTATATAATAAATGGATTAAAAAAAA EMBV3_34961 CAATGTGGGCTCTACACTGGTAACCCCTAAGACAGTACACTAGGAACCAGCCCTAGGTGA Gene GeneID:532923|GOLGB1:XM_002684791:139_cdna UTR3_Alt 3 NULL GeneID:532923 1 GENE GOLGB1 NULL golgin B1, golgi integral membrane protein EMBV3_34679 CTGTCTAATTCTGGCAGCTCAGAAAACTTCACCAAACAGGTAACCGATATCCACTTCTAC Gene GeneID:100337095|LOC100337095:XM_002688035:8_cdna Constitutive 0 NULL GeneID:100337095 6 GENE LOC100337095 NULL rho GTPase-activating protein 17-like EMBV3_30912 CATGATCCTGGCCGTGGTGCTGGTCTTCTTCGTGTGCTGGCTGCCCGAGAACGTCTTCAT Gene GeneID:527831|GPER:XM_002698169:653_cdna Constitutive 0 NULL GeneID:527831 25 GENE GPER NULL G protein-coupled estrogen receptor 1 EMBV3_20864 CTTGTCAGAGAGGAAGGATGCTGTGTGTATCAGTGGAGAGAGATAGTGGGGAAAGGACAG Gene GeneID:338033|TNFRSF1B:NM_001040490:19_cdna Constitutive 0 NULL GeneID:338033 16 GENE TNFRSF1B MGC128726 tumor necrosis factor receptor superfamily, member 1B EMBV3_39635 TGTTTAACAAACTGGGCACAGCCATGCCTTTGTCCATCTCCCTATTACAGTGTTCTGTTC Variant GeneID:535288|ZNRD1:NM_001046400:165_cdna 300^543 2 EMBV3_13680 GeneID:535288 23 GENE ZNRD1 MGC140339 zinc ribbon domain containing 1 EMBV3_01382 CCTGGTGGATGCCATTTGCGACAAGATGTCTGATACGCTGGACACAGACCCCTCCTTGCT Gene GeneID:282030|RAB3B:NM_174447:7_cdna Constitutive 1 NULL GeneID:282030 3 GENE RAB3B MGC152076 RAB3B, member RAS oncogene family EMBV3_15984 GTCACCTTGCACCTTTCTGAGTCTTAGTTTTTCCCATTTGCTGTTTCACTTTGTTCAAGG Gene GeneID:781439|LOC781439:XM_002687269:133_cdna Constitutive 0 NULL GeneID:781439 5 GENE LOC781439 NULL hypothetical protein LOC781439 EMBV3_08875 ATCCAGGGATTCTTCTATCCATGGAGTTGTGAAGGAGACGTGTGGGACCGGGAGAGTTGC Gene GeneID:504932|TMEM190:XM_002695386:238_cdna Constitutive 0 NULL GeneID:504932 18 GENE TMEM190 NULL transmembrane protein 190 EMBV3_09568 CAAAGCAAACTAGTCTTATAGGTCCGATGGTGATTGTATGTTCTCTGAAAACCAAATGTA Gene GeneID:786855|TMEM200C:XM_002697795:392_cdna Constitutive 1 NULL GeneID:786855 24 GENE TMEM200C NULL transmembrane protein 200C EMBV3_22072 CTGGGTGTGACCTTGTTCTCATATTTGCAAGTGATACTTTTAGGTCAGCAGGGAGTTTAC Gene BVV0102_038364 + 0 NULL GK000010.2:79620583-79623478 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018007 TCONS_00018006 TCONS_00014913 TCONS_00018004 TCONS_00014919 TCONS_00014918 TCONS_00014915 TCONS_00018008 TCONS_00018005 TCONS_00014916 TCONS_00018009 2 XLOC_009158 XLOC_008384 Coding TCONS_00014919 XLOC_008384 Coding Coding EIF2S1 10:79608836-79623540 j TSS10655 4229 3 TCONS_00014919_3 102 0.0728304563726649 7 0.712847718152758 0.000234894132163133 7.5832095590685e-10 9.64920223173142e-29 3.93987020550771e-27 5.29257948158633e-25 6.7066287743718e-48 9.53920001987236e-15 0.000102173561032494 9.06503223730145e-18 0.000182984941077729 2.92223200135872e-05 0.00013698179809102 1.21823159599208e-26 5.67826911291587e-40 0.000296288097646497 0.00122119600799 0.00102995806329189 1.39695168745949e-05 4.07648668150605e-34 1.26053952915514e-12 1.6692356653851e-05 0.000789046950034805 0.000211725256770554 0.00105290930510985 7.42784507473284e-29 0.000419400153728801 6.1755108503882e-18 8.08898247171135e-05 0.000218775016373498 0.000999686228879164 XM_005211941.1 EIF2S1 PREDICTED: Bos taurus eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa (EIF2S1), transcript variant X1, mRNA. 0.0 6424 100.00 0.842043036178766 NM_004094.4 EIF2S1 Homo sapiens eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa (EIF2S1), mRNA. 0.0 1727 90.33 0.298652163632064 TCONS_00014919_2 sp|P68102|IF2A_BOVIN IF2A_BOVIN Eukaryotic translation initiation factor 2 subunit 1; 1e-58 186 100.00 0.989247311827957 0 coding 0 0 0 0 -1.19333784107262 0.00397138793057176 -0.19844801797086 0.0112081097132622 GTTCTTCAGCACCTTCTCGTGTAATTTTGAGAGGATCAGCTTCCGTGATACTCTCCGTTGTTCTCAACTTCCGATGGCCAGCCACTGCACTTCTCATCTTCAAGGCACTCGTCTCCTTTGCAAAACTTCTGAACCACCACTGCACTGATATATTGATTTGTCAAAAAGAAGAGTTTCACCAGAGGAAGCAATCAAATGTGAAGATAAATTTACCAAATCCAAAACTGTTTACAGCATTCTTCGTCATGTTGCTGAGGTCTTAGAATATACCAAGGATGAGCAGCTGGAAAGCCTATTCCAGAGGACTGCCTGGGTCTTCGATGACAAGTACAAGAGACCCGGATATGGTGCCTATGATGCATTTAAGCACGCAGTCTCAGACCCATCTATTTTGGATAGCTTAGATTTGAATGAAGATGAACGTGAAGTACTCATTAACAATATTAATAGGCGTTTGACCCCCCAGGCTGTCAAAATTCGAGCAGATATTGAAGTGGCTTGTTATGGTTATGAAGGCATCGATGCCGTAAAAGAAGCTCTGAGAGCGGGTTTGAATTGTTCTACAGAAACCATGCCCATCAAAATTAATCTAATAGCTCCTCCTCGGTATGTAATGACTACAACCACCCTGGAGAGAACAGAAGGCCTCTCTGTCCTCAATCAAGCTATGGCTGTTATAAAAGAAAAAATTGAGGAAAAGAGGGGTGTCTTCAATGTTCAAATGGAGCCCAAAGTGGTCACAGATACAGATGAGACCGAACTTGCAAGGCAGCTGGAGAGGCTTGAGAGAGAAAATGCAGAAGTGGATGGAGATGATGATGCAGAAGAAATGGAAGCCAAAGCTGAAGATTAACTTTGTGGGAAACAGAGTCCAGTTTAAGGAACACAAAGCAGCCTTCCTGGCTGTAAACCCTAGACTTAAAAGTTTTCCAGTATTGAAAACTTCAAAGCTGAATATTTTTTATTTTAAGTATTTAAATGTTCCAACAGACCAAAACATGAAATGCCCTCCTAAATGTTAGCTGTTTTCACACAGTAGCTCCAACACCTTGAGCGTTTTTTAAGGGAGTGGCCTGATTTCACTAGAGACAGATCTTCAAGACGAGACATAAATTGGGCTTATGATTTCCATTTCTGATATCTCCAGATTGGCACCCCTTTGTAGATTAGTGCCTCCATGAGATTTACCAGAGGCACTCAAAGCGAATAGTTCCAACCTTTCTATATAAAATGTATCAAGCAAACATTAAATAAATTTCTGGGATATTTAACCATAGGTTTCTTCCTTATTATCACCAGTTAAAAGCATTATGATTCCTAAGAATTTCATTTTATTTGAAATGTAGTAATTTAAAGGCAGGTGACCAGAAGATAAGTATAGCAGATCCTTTCAAAAGGAAGGTTTACAGAGACTTTGCCAGTGGTCAGGACTCCATGCTTTAACAGCTGAGGGCCTGGGTTTGATCCCTGGTTAGGGAGCTGAGATCCCGTGAGCCGTGTGCTGTGTGCCAGGCACCCTCTCCCCCCACCCACCCCTCCTTTAATAAAGAGGATTTAGAGAGCATTTTAATTAGTGAAAGTTTACTCCTAGGGGAAAAAAGCCTTAAAATGTAACTAAAGAATTACATTAGTTGAGTGCCTTTTACCTATTTGAGACTGATGACAACATGTGGTCAGAAGGAGAATTTATCACACCGGTCCTTGGTGTACTAAGCTGCTTGTCCTGAGTTTGTAATTCAAGTTGGTAATGGGTGGGGGGTTGTTTTTGTTTTTGTTTTTTAACTTTAGTTTTCTGGGGTTTTTGTTTTTTAAGAAAAAAAATGCTGCTTTGTAAATTTAGTTATTTTGAGTATCATTGCCCAACTTTTAATTTTTTTTTCCAGTAAAATATTTGCTAGGTGCCACCTTAGAGTTTCACTTCTCTTCCTAACAGGTTAGGGGTCTGTTTGAACACAATTAACAATCGTTTTTCAAAATGTTTCCATCATTTTTTTTCTTTAAGAACTGATTGTTTTAAAGATAAATAATATATACAAAGGCAAATAAACTTCATAGATAACATGTGGTTTGCAGTTACAGCTACAGTGGCCAAGGTGTAGCAAGTCTTGAGTTAACTTTAGTTTACTTTATAAATTTAATCTCTTAGGATACTTGAGGTACTAGATAAATTAATTTTACTAATTATTCCCAAGAATAGCTATTTAAATACTTAGAAGATTAAATCTAACCCACCTTATTCAATCCAGGACTAGACTTAACTCACTGTTAAAAGGACTGGAAAATAGAAGAGTGTGTTGGTGAGACATTTAAGCTATTTGTGAAGGTTTGTCCCTTTGTTTAATTTAGCAGCCTCTACTAGCTCTTTAGATCCAGGTCTAACAATATAACTGTTTTCATGAGGGAACCATGACTGCTAGCTTGCATGCCATACTGGGAATATTTAGAGGAGAATCTGGATGTATTCAAATCAGCACATAATTTTCACTTCAGTTTTTTCCTGAGGAGTAAAGCTCACAGCATCACGAATGTTATCAAACTATATAACAGGTGCTGCTTAAATGTTTGTTGTAAGCAGAGGAATTGAATTTTCACTTTGTTCACTGGATTTTTTAATACTTCAAAAGCCATAACTGTTGAGAAATACTTGTGATATCCGTGGTGAGCGGTTTATATCCTATGCAGGCCTTTTGTTCAGTTCCACAACAATTCTGCAAATTTATGACCCTTGCCAGAGAAAAAGATCAATACCTCAGTGATGATGGAGAGAACTAAGTAAACTCCCTGCTGACCTAAAAGTATCACTTGCAAATATGAGAACAAGATCACACCCAGTTCTAAAAACTTGAAAGGATTGACAAAAGATCAGTGAACAGTTTACCCAAATTTTGAATCTCTCCGCGTAAAGACTCACTAGAAATTGACAGTTTCATCTACTCCCAGTTCTGTCTTTGAGGTCAAGTGGTTATCAACTCATAACTGAAAATTAACAATAGTTTGAGTCTCATTTAGGTATTAGTTGAAAATTTTAAATGGCCGGAAAAATACAAATATCCAAATGATCTTTCATGTTTTCTAGTAAAACAAGACAAGCCAGTACTTGAGGATAATGCTTAAAAACTTAGTGGAAACCCACAGACGGCCTTGCTTGACCTAGTTAACTTCCACAGTAAAAGCAATTTAAATGGTTAGGAATTTTAAAAATTCAAGTGCTAGTACCCTTGGCAAGAACTGTCCCATGATTTGCCTCAAAGTAATAGTCAGCTACTTTTCAACTCATGATACTGATACCTACCGTACAGAGTGGGGTGTAATTGTGCCAATTTACAATCAAGAAGCCATCAAACCAAATGCAGCTTAATTCAGATAAAAACCTATATTGATAGCAAAAAGCAATAAAAAAAAACTGAGGACACAGACCTTGGTGAGATGCCAAATGGAAAATGGTGCTTTAAAAGGCAGTCTCTTACAATGTAAGGAATAAAGTAAAACCTCATTAGCTTGGAATTCCTGATCTGAATGATCAGGTATTCTAGACAAGATCAAGAAAAGATAGTTCAAACTATTGAATGAACTTTTACTTAAGCACTTTGGAGGTGTTCACGCCCCTTAAATGTAAGTTACATATCTATTCATTGAAGGAAGTCTAAGCAGTTGTACTGGCAGATTACTGTATTAAGCTTGAAAGTAATAAAAATGTTTTTAAAGACACTGTATGATACAGACTTTTCACTACTTCAGATTAACCTAACTGATGAACCTTCTTGGTACCTATTTGTCTCCATTAATCTTCATTCTAAAACCAAAATTTCATGCTTTGATTTAATTCTCCCATTGACATCTTTATCTCCTTTAGAAAGCTCCTGCTCTGCATCTTTCCAAACAACTTTTTTCTTTTTTCACAGAAAAGCTGTAATTTTACTTTTATGTATGTGACTAATCCAACTGAGTCCATGATTTCTTTTCTGCAATGTGTAATACTTATGAAGGCTTCTTTTTCAAAACAAAACAATATTTCGTTCAAGATTTTGCCCCATCCATACTTTGAAGATGAGGCTTTAAGCTCACTTGAGATGTTTTTATAATCAGCTTGCCTAATAATTCTTACAGCCTTAAGCATGAAAAACCTTTGAAAACTGAAACTTTGTATAGGAATTCTAATAGCCAGTAACAAGTGTCAATTTTTATTCATTCCAAAGGCGTTAAGAGGTCCTGACAGCATTTCTGAGAGC EMBV3_39594 ACAACTTGCTCCTCCATGCCTTGCTGGGAGCCTCTGAAAGCACTGGCAATTTTAAGAGTC Gene GeneID:541075|TMEM168:NM_001078031:72_cdna Constitutive 2 NULL GeneID:541075 4 GENE TMEM168 MGC152038 transmembrane protein 168 EMBV3_28470 CTGGTGAAGAAGTACGCTGTGATGCAGGGCATGATTCTGATGTTCGCTGGGGGAAAGCTA Gene GeneID:615603|LOC615603:XM_002697137:91_cdna Constitutive 0 NULL GeneID:615603 22 GENE LOC615603 NULL similar to Uncharacterized protein C3orf20 EMBV3_20052 GCAGGAGCCAAGACTGGGGAACCACATCTCCTTGCCGTAGTGTTTGAGTCTTATCCAGAA Gene GeneID:505908|PDGFA:NM_001075231:95_cdna Constitutive 1 NULL GeneID:505908 25 GENE PDGFA NULL platelet-derived growth factor alpha polypeptide EMBV3_40285 GGCCTGTTGTTGAAGAGGTCAAGGAAGTCAAAGGTAGGAAAAAGGAGCCAGCTGAAGAGC Gene GeneID:100140108|PCDH15:XM_002698334:7_cdna Constitutive 0 NULL GeneID:100140108 26 GENE PCDH15 NULL protocadherin-related 15 EMBV3_37510 TGTCTCTCCTGATGCCCAGTCCTCTTGGATGGACTCACCAAATCCCATTTAGAGAAGACC Gene BVV0102_111970 - 0 NULL GK000002.2:73331398-73379884 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105552 TCONS_00105551 TCONS_00105547 TCONS_00105549 TCONS_00105550 TCONS_00105548 TCONS_00105546 1 XLOC_062597 Coding TCONS_00105546 XLOC_062597 Coding Coding TFCP2L1 2:73372911-73393793 j TSS77861 8053 3 TCONS_00105546_3 193 0.198559543027443 9 0.614769407595422 0 0 2.85304026960836e-07 0 0 4.43362339620121e-07 2.73421691467161e-13 0 7.83610869936145e-06 6.94849600407021e-05 3.73926723653266e-11 9.24153285467905e-07 0 0 1.59069790410867e-13 0.00660155466265965 0.00722574985335568 0.00339555070026528 8.88845094474402e-07 0 0 0.00320270975455716 0.00103394840903739 0.00142435420590645 0 5.51159797042783e-05 8.67570851064896e-05 0.000362344989187735 1.27536639633421e-13 0.000409689254342876 XM_005202559.1 TFCP2L1 PREDICTED: Bos taurus transcription factor CP2-like 1 (TFCP2L1), 0.0 2560 100.00 0.176083447162548 NM_014553.2 TFCP2L1 Homo sapiens transcription factor CP2-like 1 (TFCP2L1), mRNA. 0.0 1025 77.56 0.156711784428163 TCONS_00105546_1 sp|Q9NZI6|TF2L1_HUMAN TF2L1_HUMAN Transcription factor CP2-like protein 1; 2e-117 345 95.86 0.994082840236686 0 coding 0 0 0 0 -0.128425386585115 0.586337615459406 0.0251684927616139 0.751021373048439 TCTTGGCTCTATCTGATTTCTTCCGTGTGGTCTGAGCACCCCGCCCATCCCTGGGTACCAGTGCTCCCCATGGCCTGATGTGGTTTACCAGGTGAATAGTGCCTCATCCCCAAGCTACAACGGCTCACCAAGCAGCTTCGGCCTCGGTGAAGGCAACAGCTCCCCAACCCACCCGGTGGAGGCCCTGCCTGTGGGCAGTGACCACCTGCTCCCCTCGGCCTCCATGCAGGACGCCCAGCAGTGGCTCCACCGCAACAGATTCTCCCAGTTCTGCCGGCTCTTCGCCAGCTTCTCGGGTGCTGACCTGCTCAAGATGTCCCGAGATGACTTGGTCCAGATCTGTGGCCCTGCAGACGGGATCCGGCTCTTCAATGCCATTAAAGGCAGGAACGTGAGGCCGAAGATGACCATTTACGTCTGCCAGGAGCTGGAGCAGAGCCGCGTGCCCCTGCAGCAGAAGCGGGACGGCAGTGGGGACCCCAACCTGTGTGTGTACCACGCCATCTTCCTGGAGGAGCTGACCACCTTGGAGCTGATCGAGAAGATCGCCAACCTGTACAGCATCTCGCCACAGCACATCCACCGGGTGTACCGCCAGGGCCCCACAGGCATCCACGTGGTGGTCAGCAACGAGATGGTGCAGAATTTCCAAGATGAATCCTGTTTCATCCTCAGTACCTTAAAAGCCGAGAGCAACGACGGCTACCACGTCATCCTGAAATGCGGCCTCTGAGCAGATGCAGAGTGGGCGGCTGCTTCCCACCCCCAGCCCCACGGACCCCCTTGGCTGTAGATATCACACCCCTGGAAGCTGTGGCGAGGAGGGACCTGGCCCAGCCCGTGAAAGCCACAGACCCGTGGAGGCTGCGGGTCTGGAGGGCAGAAAGCCAGCAGCTCCTCTCTCCCCTCCTCTTAGCCCCCAGCTTTGGGACAGTTTCCTGTTCTTTTTCCCAGTCCTTCCATTTGAAAAGGCCAACAGGGGCCATCTGCTCTGAAACCTCTTGCTCCCCTGGTTGGAGGCTAGTTCACCAGGTACCCGGGTGCCACCTGTGCCGGCTCCTTCCGCCCATTCCCCTGCCTCAGAGAAGGCTCTGCCTCTCCCACAGGCCTTCACCCTCTTCTCTGCTAACTGGTTGGGTCCCCGGGCGGCTGACTACGTGGGGGTGGTTTGAGACTGTCCTGTCTCCGTGTCGGTTTCCCATCTTGGTGATCCTGGTGAGCATCTGTCCTTCCTGTTCCTGGATAGGCTTGATGGGTGTTGGGTTGACCTGTGCCTTCTGCTTCTTTTCACATCGACCTTGATTCTAAGTGTCTGCTGCTGCTCACAGCCCAGAGGGGGCCTTGCATTTCTCCATTGCTGGGGTAGACACTACGGAGCCACACACACCTGGTTCTAAGGCCCTTGGGGAGGAGAGGACGAGGCTGAAAAGACTATTTTTAGGCATATTCTCATGAGTATAAAAGGGAAGAGAACCAAATGATTCCTCTTGGGCTTTTTTTTGGGTGTAAGTTTATTTCCTAAGCAGTCTTGAGTAGAGGAGGACTAGGAAGTGAACATCCTGTTGTAGGATCACATGACCATGACTCTCCTGATGCCCAGTCCTCTTGGATGGACTCACCAAATCCCATTTAGAGAAGACCACCAACCTTCCCAAGCTCCCTAGGGATGTTGTATCTTCTGGGCAGGCTCCCCTTTGAAGGTTTCTTTCTTTTCATTTGTAGAGGCTGTGTTTGGGCATTTCTCCTGCATTAGAATGGTTGGATCACCTTTCTTAGATAACCAGGAATTAGTGCCTGTCTCTTGGGACCCTGTGATCTATATTGCTAATGTAGGTTCATCTAACAAAGCATGGTGAGCACTGTGACCAGCTGAGCAGGATCTGACAGCCTTTCAAGTGGAGCTTTTGGGGAATAGCATGCTTTGGGGGAATATAGAGATGATCATAACTGAGTAGACCTTGTTTTAGAGACAGAGAAACTGAAGCCTAGAGGGGCAAAGCCACCTGCCTGATATCACATAGTGATAGGGTAATAATATAGATTTGTCATTAAAACCAGGGCATTTCTGAGAGTGAAAGGAGCTCTGGTAATAATAATGCTTGGACCACAGGTATGATCTACTGCTCTGTAAGGACAGGCTTCTCATTCCCTTCCCATTTTGGGGGTGGGGGGATGGGGAGCATGTAACAGCCTTCTTGAGATATAATTCACATACTATACAGTTTACCTCTTTATAGTGTACAGTTCTGTGATTTTTTTAGTCAATTCACAGAATCGCCACAATCAATTTTAGAACATTTTCATCACCCAAGACATATCATGTATATGGAATCATACAATATGTGGTCTTTCGTGGTCCTTTTTTTTCACTTAGCATAGTGTTTTCTAGGGTCATCCATATTGAACACGTATCAGTACTTCGGTCTTTTTATAGCTTAATAATATTTCACTCCATGGATGGACTGCCTTTGTTTATCCATCCATCACTTGATGGATATTTGAGTTGTTTCTGTCTTGGGGCTATTGTGAATAATGCTGCTATGAAGTATTTGTACACAGTTTGGTGTGTTTTCTTTTAGGAATATACATATGACTGGAATTGCTGGGTCATTTAGTAACTCCATGTTTAACTTTTTGAGGAACTGCCAGACTGTTTTCCAAAGCAGCTGCATCATTTGACATTCCCATCAGCAGTGTATGAGGGTTCCAGTTTTCCTCCATCCTCACCAACACTTGCTAGTATCTGGCATTCTGATGATAGCATCCCAATGTCATTTTGATGATAGAAGTGGTGTCTCATTGGAGTTTCAGTTTGCATCTCCCTGATGGCTAATAATGTTGAGTATTTTTTCATGTGCTTACTGGCCATCTTCTTTGGAGAAATGTATATTCATATCCTTTGCCTATTTGCAGTTGGCTTATTTGTCTTTTTATTATTGAGTTGTAGGAGTGTGTAGAGTTTAGATGTAGGCCCTCTATCAGATATATGAAGTGTCAAACTGTTCGCCACTTCTGGGGGTTGTCTTCACTTTCTTATGATGTCCTTTGAAGGACGAAGGTTTTTAATGTTGATGATCTCTAAGATACCATTTTTCTTGTACTTTTGATGTCATACCTAAGAAACTATTGCCTAATCCAGGGTCAAGAAGATTTATGTTTTCTTCCAACAATTTTTATAGTTTTAGCTGTCCAGTAGTCTTTGATTAATTTTGAATTAATTTGTATTTATGATGTGAAGTATGGGTCCAACTTCATTCTTTTGCATGTAGATAGTCAGCTGTCCCAGCACCAATTGTTGAAAACACTATTGGGGTCCCCATAGAATTGTCTTTATACCCTTGATCATGGCCCCTAATTCTTACTGGATCTTTTTCTCTGCGACATGGGACTGTCATTAGGATGCTCACCTTTTTTTTTTTTTTTTTTTCCAGCCCATGTTTGGCTCCACCAGTTTTACAAATGGCTTTCTCTTCTTTTTTTTTCTGTCTCCCCCTTTCCCTGTTTCAACAGTACTAGGTGACATCACTCTGATGATCTACAGCCTTTCTGATGCATGGCTCCACACATCGGTCCTAGGGAAAGGTCAGGATCAATCATTTTCTGTTTTGAGGAAACCAAGTCACACAGAAGTAGAAAAACTTGCCCAAGGTCCCCCAGAACCAGAACTAGATTATTGGTCTTGTGACTTCTGGCATTTTGAGATGTCTACAGTTCACTAGACCCAAGAGATGCCACTTCCCAGGCCAAGTGATGACAGGCTAAAATCTTAATTCTAAAAATGTGGTAGGCTAATATTTTATTTTTATTTCTTCATTCAAAATAAGGGTCCAGTCAAGATCTGTGACCTTCAGTTTGCTGTAGGTGGAGTCTTTCATCTGGAATGCACACTGCATCAGCTCTGCTTACCTTCTAATGGTTATAGTTCAGTCTTGTAGCTTACACAGAAGTAGAAGATAATAAATACCAAAGAAGAATACACAGTCATTTGGTACCAAAATGTTTTAGCTGCCCAATTCAGCAGTTTGTTGCTTCCACAGGGGTCAGAGGAGCTAGCTGCAGGTGTTTGGATTTTGCGTCTTTTTTTTTTTTTTCCATTTTATTAAAGTACAGCAAAGCTGTGGCCTTTTCACTCCTGTCCACTGTCTTTCCTGTGTGCTCTGAGTCCAGCGTCTGGGCCTGCTGGACAGGGTGACCCCTCCCAGAACAGTCCCCTCCACCCCCACGTATTCTGAGCTGTGGCTTCTCCTTGGCAGCAACAAATTTTAAAAGGGATCCCCCAAGGGACAGAAGACGTACCGTGCACCAGAGCCACTGTCTTGAACCAGAAACCTACAGTGGAGTGCTTTTTCTCAGTCCATTGCATTTCTTTGCTGGGCAGTTGTCTGCAGGGTTGTGATAAACCTTTTCCTGGTTACCGAGTCTCCCCTTTATAATAAAAATATGGGCTTTGGAATGGGGAAGGGATTGTAGTCCTTTGGAAAGAGCAGGATGGGCATGGAGTTGGAAATCTCAGTGTAAGGTACTAAGCAAAGGTCAGATGCTGTCCTGGTGACCTCCTTCCCCGGCCACCTTGGGCTTCTTGGGAAGAACCATGAACCTAGAGGGACTTTCCCAGGAGCAGAGTGGAGCTGCCTGAGCAATGCGTCACAAGTTTCCAAGTCCAGACCGGCCTCAGGGGCTGGCCTGCATGAGTTAAGGTCTGAAAATCATTAACGAATTAATGAGAAAAATGGAAGAGCTTCTTTTGCTGTTGTCAGTGGAGCAGAGGGAGGCCGCCCCCAGCAGCTCAGAGAAGATGGAAAAGCAAGTGACCAAGAGCCAGGAGTCCTGGGCTCCTAGGCCCTCACTTGGTGTGCTTTTTCTGCCTCTCTGGGTCTCACCTCCTCTCAGGAGGCTTCTGGGGCTGTGAATGACTCAGGCATGAGTGTGTCTGAGGGGAGCATTCCTTTTTTTCCCTCCATCAGAGTTGCACTGTGGGTGGGTGGCGTGTACATGCGTGCTTCCTAGTGGTACACAGCACCTCAGTGCTTCTGCTTGGACTGGTACACGCTCTGAGGTTGCGTGCATTTCGATGTGAGACACTGCATCTTAGCCATGTCTTTAGGAATCCAGCCTAGCTTGCAGCCGGGGTGACTTGATTCTATCCATGCCCTTAAGAGTGGCCACCAGCTGTTCCCTGCAGCCTGAAGCTGGATTCCTTGTTGGCTGGCTTTATGTCTACGTTACAGACATGCATGTGTGCATGCCTGTGTGTGTGCATGTTCATGGATGCACATGAATCCCCTCCTGTGCCCCTGTATCTGGCATGAGGAGGGCAGCCCTGAGTGTCTTCAGCTCACCTAGACAGAATGATGACTGCTGCTTCCTTTAGACCTTACGTGATGCTCCTGGTTCAGACTCTTGATAAAACTAATTAGTGGACTGTAGCCCTAATTGTGGGGAAAGGCCCATCCTCAGTCCTGCCCTAGGGAGCAGAGCAATGCTGGGAGCTGACATCTAACCAGGACCTCAAAAGCAAGGCCCTTGGACTTGGTCTTACTTGCAGCCACCTCACGTTCCCTGTGTCCCCTTGGGTTGCGTATTCTGTGTGTGACGTCGTCAGTCAGGCCAGGCAGTAGTAGGAAGTATTTGTGCATCCTCTCTGATCACCTTCTGGCCCCCTTCCCTCCACTCTGTGGGGCAGAGCAGTGCAGTACAAGACAAGCCACCCCCACCTCCTTCCCCAAGGCGAACCTGAGAACTCCATGCAGCCTCTGCCCAGCTCCCCAGAGCACCTTGCAAAGGCTGGGCTTTCCTCCCTTCTGCTCCTGCGGGGAATGACTGAGTTCTGAGGGTGTGGTCCTCACCTGGCCATGTAGGGACTTTCTAGTGGCAGCATCCCCAAGAAGTATCTCTAAGAGGTAGCTTTGCTGTTCTCTCCAGGACAACTGGCAGGGTGAGGCAGGGAGGGGCCAGCACTGCTTAGTCATGGGCTGAGACACCTGGCTGTTTGGGCAGCCAGGCCAGCCTGTCCCAGGAGGGAGTGTGTGAGCCTGTCCCTGCCTTCATCCTGTGGAGCCCCAGACAGGGATGGGGTGAGGGGTGGTGGCCTGCAGAGGGCTAGCAGGCACCAGGAAGCCTTTTATCGTGAAAAATTTTCAATCCTTCTTGAAAGACAGACCAATATAATTAGTCCTGGTACCCATCACTCCACCTCCTTCACGATCACCCTACACCTGCTCATCAGGGACAGGCCAACTGCGAGCCAAATGCAGCTTCTTGCTGCATTTTGTAGTCTGTTTGATAACAGGGAACACTGAACTCAATGAAGTGAAATGTCATCCTGTCCTCCCTTCCGCCATTCCACTCCCGTTTGTATTGCCAAAACCTGTACTCAGTTATTATAGTTTGAATTTCATCATCTGAAACATGGAAACTCATTTTCTCTTATTTGCCTCCTTGAAGCCCTTAAAGTCAAAAATAGGTCTCATCCAGCCTTCACAGAAAAACATTGCCCACTGCTGAGCTAGACCTCTGTTACTCTATATGCCCCCTACATGATGTTGAATAATATCCTTGAAAATAAGGGCTTTTAAAAATAATAAAAAATATTTTGTTTGGAGCTTTGAAGCAAGAGGATCATTCAGCCAAGCAGTCTTTGAAACCAGACCCCCACGCCGCCTGTTAGTCATGTGCCCCCTCCCCCAGACAGTCTTTGCCCCAGCTGCTCAGGAATCATAGTCCTTTGCTCTTGCCCCTTCCCTCCTGCTGTCCACTTCTTGGAGACTTGCTGGGCCTTTGGTCACAGGGCAGGGTGCGGGAGGTTGTGTCCGAGAGCCGGATGTGGGGAGAATACAGCACCGGCTCCAGGCCCTGGTGGGTGGCGGTCTCTTGACTTAGGTCACTGGGACTTTACCACCCCAGGAGGTGCAGCCTGACCTCCACCTCTACTGGCACCTTGAGGACCTCTAAGCTGCTCTGGGGTCCCCCAAAGCCCCCCTCCACATGTCTGCAGCTCTTCCCCCGACAGAGGGACTGGCTTATGTCAGCTTGGTGATGGGGAGGATTTCCCTGCCCTCTGCAAGGGTTCCCTGGGCCCAGTGCTCACTTCTGCCCCTGGGAGAAGCCGGCCCATAGGCAGCCTCATGTTGGGGCGGTCCCGTCTCCCTGTGGCTTGGCTGCCCATTCTGGGCCCCAGCTCCTTTGCTTCCAGTGAAGATGGCCAGACACTGCAGCCAGCCCTCCGTTAGCACCAACCGCTGATGATGCTGACTGGCCTCGCCTGAGCCAGACTTTGGGCTTCGTGCTTTGCCATTGTCCCATTTGAGCCTCCTCACAGCTCTGAGGCCCCGAAGGCTGATTTCTAGTTGAGGAAATCAAGACTGAGAAATCAGATAGGGGCCTGGGTCCTTTGACTATCGATGGGCTGAGCCAGGGTCCCGATCCTGCATCTAGACCTCGCGCACTCTTGTCCCAGATGCACGGGCGAGTCCTTTCATCCCTGAAAGGGGATGCTCACTCTCCTGATGACATCATCCCTGGGCTCTGTGCCCTGTGGTGGGTTGGGGGGTGTAAGGAGTGGGGCAGAAGAGAAGGTCATTGTTTTGTGCCTCCCACCAGCCTTCCCCTTGCTGGGCAACACCTTGGTTACTGTGCTTACCAATGCTCCTGTATAGAAAGTGATTTCTTTTTTAGAAATGTCACTTTGTCACTTTTCTCCAGATGGGGTGACTCTTCTCTTAAGGTGGTAGGCATCTCAGTTGGGGCGGTGTGGCTATCTGATGGGTCAGGTGGGCATGACATTGGGAGGGGTTGTAGGGGGGAGTGGGCATCAAAGCAAAAGTTGTCACACTGCCACATTTTTGTACCTGAAATAAAGCATATTTGCACTTGTTACTGTACCATTGTGAAGACGAGATCTCTGTGTAGGTTCCGTGCTTGGGTCAGAATGCAAATAAAACTCATTTGTAAGAAACCTGTGTGGCTCAGACCTCTGGCCTTTAAATATTTTTCAGTTGTAAAATATTTGTGACAGGAAATTTACCATCTTCAGCATTAAACAACAGCTCCTCCA EMBV3_34787 CACTCCAGGAGGTCATAGTGCAAACGAGTACTTCATCTTTAGTACCTCAAGTTAACCGGG Gene BVT0102_071762 - 0 NULL GK000016.2:61681734-61810680 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067802 TCONS_00067806 TCONS_00007543 TCONS_00067799 TCONS_00067797 TCONS_00067804 TCONS_00067793 TCONS_00067798 TCONS_00067807 TCONS_00067803 TCONS_00067800 TCONS_00067801 TCONS_00067792 TCONS_00067808 2 XLOC_041548 XLOC_003104 Coding TCONS_00007543 XLOC_003104 NonCoding NonCoding - 1:49807991-49808296 - TSS4620 305 1 0 0.000334567033558895 0.000131782645215496 0.000530967275171819 0.000163360157212615 0.000283281236569489 0.000187648514559528 0.000487569333136123 0.000290887200086272 0.000323365426574287 0 3.75276463235584e-06 8.20649548834987e-05 3.29261966779306e-05 2.31344379597692e-05 3.21717745768555e-05 0.000606167729372031 0.00462688061055126 0.00382533354775759 0 7.07354436785328e-05 7.96256951858646e-05 0.000827222506983133 0.000596563251589906 0.000604626280690534 2.27163255473351e-05 8.08496280421675e-05 7.68413693191715e-05 0.000409400757138085 0.000167125815508087 0.000108417551442485 XR_237803.1 RALGPS2 PREDICTED: Bos taurus Ral GEF with PH domain and SH3 binding motif 2 (RALGPS2), transcript variant X2, misc_RNA. 3e-147 524 98.03 0.99672131147541 XM_005245297.1 RALGPS2 PREDICTED: Homo sapiens Ral GEF with PH domain and SH3 binding motif 2 (RALGPS2), transcript variant X1, mRNA. 2e-79 298 82.30 0.99016393442623 0 noncoding 0 0 0 0 0.0754519331045326 0.719847529023304 -0.0746201103655613 0.297677106167483 ATTATCAACAGATCCATTGTTTTACAGCTGACTGAAGTATGTATGTGTGGGGAGGGGGTGGGGAGCTCATTCACAGTATAATCTAAAGGAGATAAAGGCATCTGTGGGGTTGAATATCCAATAATTATAATATACAGGAAAACACAAGCCATTTTTACTCTCCTTCATCCCGGTTAACTTGAGGTACTAAAGATGAAGTACTCGTTTGCACTATGACCTCCTGGAGTGACGTGCAGCTTGGTTCCTCTCTCACTTTTGATTTCTGTTTAATATGCAAATGTGAGTGTGAGATCTTAAGTGTGTTT TCONS_00000582 TCONS_00000583 TCONS_00000584 . 5' 523286 TCONS_00000582 TCONS_00000583 TCONS_00000584 . 5' 523286 EMBV3_24974 TTAACCTTTATGGCAACAGTGTAGTTGTCTGTGGTGAGAACAGTACTTGGGAGCCCGAGC Gene GeneID:280851|CD46:NM_183080:4_cdna Constitutive 0 NULL GeneID:280851 16 GENE CD46 MCP MGC142958 CD46 molecule, complement regulatory protein EMBV3_27845 CAGGAACTTGAAAAGATGCTTGGAGTGAGTAAGTTTGAGGGTGGAGTTATGGAACGTCCC Gene GeneID:511168|MDC1:XM_002697355:331_cdna Constitutive 0 NULL GeneID:511168 23 GENE MDC1 NULL mediator of DNA-damage checkpoint 1 EMBV3_25592 AAAGGGAGCTTCCCTATTACCCAGGGGCTCATCCTGTGCATCCACCCAAAGGAAGCTATC Gene GeneID:535378|PARD3B:XM_002685527:96_cdna Constitutive 0 NULL GeneID:535378 2 GENE PARD3B NULL par-3 partitioning defective 3 homolog B (C. elegans) EMBV3_07814 AGGCTGGAAGGTTGACGCCATAGCTGGAGTAACAGTGGGAACTTGGACTGTAAGACGGAA Gene BVV0102_135985 + 0 NULL GK000014.2:39535205-39633188 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056126 1 XLOC_033930 NonCoding TCONS_00056126 XLOC_033930 NonCoding NonCoding - 14:39605941-39606353 - TSS41803 412 2 TCONS_00056126_1 43 0.519417475728155 1 0 0 0 0 0.000191478635387565 1.19834413643005e-05 0 1.41546503421811e-05 0 0 0 0 0 8.35713049193862e-05 0 0 0 0 0 0.00106171468711726 0.000261823464812928 4.42096673420111e-05 0 0 0 0 0 0 0 0 0 0 noncoding TGTAGGCTGGAAGGTTGACGTCATAGCTGGAGTAACAGTGGGAACTTGGACTGTAAGACGGAAACGGCCTGCGGAGAATGGCAGAAGGTCAAAAGAGCCAGTGTTCCCAACACCATAGGGCCAATGTGACTAGTAATGAAGTACTTATCCAAACCCTGTCACACGAGGGAGAAATGTGTCCTAATTTGTTTAAGCCTCTGTTATTTTAGCATTTGCTATAGTAACTGTCTCTTAATCCAGTGAGAAAGGTTATTCTGTGCCCTGGTAAAGACAGACACCTCCATACACCATGGGAACCACTTGATGAGGTTGTTGTAATTTCATGGAATAAGCTCAGATGCTGACATTGAAAGGCGACTTTGGCATTGCCATGTGATAATTTTTCAGGATGTTGTAAGCCTCTGTACCTGTT TCONS_00053376 TCONS_00053377 TCONS_00053373 TCONS_00053374 TCONS_00053375 TCONS_00053378 . 3' 26836 TCONS_00053376 TCONS_00053377 TCONS_00053373 TCONS_00053374 TCONS_00053375 TCONS_00053378 . 3' 27247 EMBV3_10001 ACAATGATTCTGTGTAAATAGCTGAGGCCCAAGCCCATGATGGACAGCAAGCCTTCCAGG Gene GeneID:506527|PEX11B:NM_001075266:56_cdna UTR3_Alt 2 NULL GeneID:506527 3 GENE PEX11B MGC139582 peroxisomal biogenesis factor 11 beta EMBV3_37911 AGTGGGAAGAAGGAACTCGAGGGGTGAACCGCCCTGGGAAACACAGGAGTTCAGGGGGAA Gene GeneID:520970|LOC520970:XM_002698079:80_cdna Constitutive 0 NULL GeneID:520970 25 GENE LOC520970 NULL similar to Uncharacterized protein KIAA0556 EMBV3_25295 GACACTCAAGCCAAATACCAGAGTTACTTCTCCAGAGGCGGTGCAAAGTTCATTGGGATG Gene GeneID:515332|MYSM1:XM_002686405:275_cdna Constitutive 0 NULL GeneID:515332 3 GENE MYSM1 NULL Myb-like, SWIRM and MPN domains 1 EMBV3_43469 ACAGTCCCCTTGGAAACCAGAGCCCCACCCTTGACCTTGACCCTGACCCTAGGCAGAGAT Gene BVV0102_045533 + 0 NULL GK000001.2:145887686-145901344 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17694 GGGCATCAAGTCCAAGGAGGCTGAGGAGAACCGGCTGAAGGAGCATTATCTCACATTTGA Gene GeneID:523045|PSD2:XM_002689215:50_cdna UTR3_Alt 2 NULL GeneID:523045 7 GENE PSD2 NULL pleckstrin and Sec7 domain containing 2 EMBV3_03852 AGAAGAAGGATCCCAGCCGCAAGAAGGAGTGGTGGGAGAACGCGGGCAACAAAATCTATA Gene GeneID:522232|LOC522232:XM_002690274:20_cdna Constitutive 0 NULL GeneID:522232 9 GENE LOC522232 NULL similar to Brefeldin A-inhibited guanine nucleotide-exchange protein 3 EMBV3_35606 CCCTTCTTCTGGAGGGCTTAACTAAGATTCTTCAGGACCCAGCAGACATCGAAAACATCC Gene GeneID:618601|ULK2:NM_001102321:114_cdna UTR3_Alt 2 NULL GeneID:618601 19 GENE ULK2 MGC160050 unc-51-like kinase 2 (C. elegans) EMBV3_29755 CAGATGGAGAGAAATTTTGCCCACAGATGGGTTACTGTGCAGGATGGTATGTCTCAGGCC Gene BVT0102_298897 + 0 NULL GK000014.2:5657246-7440515 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051241 TCONS_00051239 TCONS_00051243 TCONS_00051242 TCONS_00051240 1 XLOC_031138 NonCoding TCONS_00051239 XLOC_031138 NonCoding NonCoding - 14:5768744-5787781 - TSS38250 699 1 TCONS_00051239_3 79 0.281831187410587 5 0.963542761084261 0.000624724140016286 0.000296059630252321 0.00156718850963852 0.000288141280633084 0.00011299696052067 4.00707127951137e-05 0.000200199740191277 0.000662553581732625 9.28632726266838e-05 0 0 0 1.68395458307414e-09 0 0 0 0 0 0.00192290818793583 0.000828791094343108 0.000107411365663987 0 0 0 3.28911044277273e-08 0.000716490561702148 0.00203465595081362 0 0 0 NM_001101837.1 ABC1 Bos taurus ATP-binding cassette, sub-family A (ABC1), member 9 9e-19 98.7 89.47 0.107296137339056 0 noncoding CTGCCTGCTGTGCCTGTCCTTTTTATCTCTGCCAATTAACTTTCTACTTCTCCTTCAAGGTCTTTCTTGAGACCACAAGCGCCTTGACACCCTCTAGAATCAAACTAACCAAACACAGTACTGCCCTGGAGTTCGTGCGAAATATTTGCCCCATCGGTGCACTTATCTGTGACACTGCAATTATCACTGTGATTCCAGGAGGTTAGCTCAGACGTGTTCCCACAACAGTCTCGGGGCAGCACAGAACCAAGTAGAGAGGCTGTCAGGACCTCTGAGATCTTGGCTTGGAACTCCCATCATGACCTTGCCACTGCAAGTCTACTGAAGCAAATCATAAGGCCATAACAGATTCAAATATTGAAGAAATGGAAACATCTCTTGATGAGGGGAGCCACAATGTCACATCTCAAAGGTCTACAGATGGAGAGAAATTTTGCCCACAGATGGGTTACTTTGCAGGATGGTATGTCTCAGGCCAATTTTGATGTGGACAGGAATTAACTTGATGGAATATTTAATGAGAACACCATGGAACTTTCCTGGAGGTCCAGTGATTAAGACTTCGCCCTCCAGTACAGGGTGTACACATGTTTCACAACCAAAAAAAAAAAAAAAAGAAAGAAACATAAAGCAGAAACAATATTGTAACAAATTCAATAGAGACTTAAAAAATGGTCTACATCCAAATATAATTATTTC TCONS_00051237 s 3' 92630 TCONS_00051237 s 3' 92630 EMBV3_13513 ACAGTGATATAAACAAGTAAGTACGTGGGTGGGGGCGGTGCAGGTGCAGCTCTTATTTAT Gene BVT0102_003137 - 1 EMBV3_01974 GK000010.2:82532248-82559533 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24602 CTTTCTCTAGCTGTGACAAGTGGGGGTTACTCTCTCCTTGTGGAGCAGGGACTCAATAGT Gene BVT0101_046681 + 0 NULL GK000007.2:17789020-17795678 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212167 1 XLOC_130105 NonCoding TCONS_00212167 XLOC_130105 NonCoding NonCoding CLEC4G 7:17787638-17793042 x TSS159271 1471 2 TCONS_00212167_1 54 0.197144799456152 2 0.728114010734777 0 1.36620545224157e-05 0.000173378816064458 6.77428506595976e-05 6.37705310986909e-05 9.72684557372535e-06 0.000253724472250746 8.04175733450496e-06 0.000123367164372681 0 0 0 1.95056456269259e-06 0 0 0 0 0 0 0 0 0 0 0 1.41301285571335e-05 0 2.3898633424176e-05 0 0 0 NM_001205606.1 CLEC4G Bos taurus C-type lectin domain family 4, member G (CLEC4G), mRNA. 2e-24 118 100.00 0.0435078178110129 NR_002931.2 CLEC4GP1 Homo sapiens C-type lectin domain family 4, member G pseudogene 1 (CLEC4GP1), non-coding RNA. 3e-10 71.6 82.61 0.0462270564242012 0 noncoding 0 0 0 0 -0.00987161539588738 0.936787206161191 -0.00827015193864283 0.879755119084677 ATCTCACTCACAGCAGCTATTGCACGCTCGGACCTCCTCCTCCAAGATACCCAGCACCGCCGTCTGTTTGGAGGCTGGAACGATTCCACGCCCGCACGCACGCACGCCAGGTCATCCTCGGGGACTCCCAGGACCCCACCCAACTCCAGGGCCAGCCCCGCGGACCGTGGGATCCCCGCGCTCCCGCCCACTACTCCGACACCCGGGTCCGAGACCCTTCTGCCCCCGAACTTTGGCAAGAGCCTCTGTTCTCTCCGTACCGTTTGCGCTCAGCCCGTCTTGGAGGTCAAGCAGCGCCCCGCGCTCGGTGGACGCTGCGGAGAGAGGAGGACTCGAAAACTCTCCCCTCGGCCCCTGGGAGTGCGGGGACCCGGGTCATGGGGTGCACAGCAGGGGGCGGACGGACGTGCAGCATGGGCGGACAGGCACATGCACGGGGCACAGACTCGCACATGTGGGTGCTCGCACTCAGACCAGGCAGAGGCTCCGGATCTGGCTGCCCAAGGCACCCTGCAAGAGTCTTCTCCAGCACCACAATTTGAAAGCATTCTTGGTGATAACTAAAAGGAGGATTATCAGAGTGATTATAAAACTGGATTGCTGGGTCTTCTGTGATGGCTCAAGTGGTAAGGAATCCACCTGCCAACCCAGGAGACACGAGTTCAAGTCCTGGTCTGGGAAGATCCCACGTGCTGGGCAACTACTAGGCCGGTGGACCACAACTATTGAGTCCCTGCTCCACAAGGAGAGAGTAACCCCCACTTGTCACAGCTAGAGAAAGTACACACAGCAAAGAAGACCCAGCACGGCCAAAATAAGTGAATTAAAAAAAAAAAAAAAACTGGATTGCTTCTACTTCACAGGAAGGAATCAAAAGTTCAGACAGGAAAGGTAGTTCACCCAGGATTTAGCCAAAACGCGTCTGTGCCCTAATCCAAAGCCATGTTCCTCCTGCAACACAGCCAATTCTCTTAGTTACTGTGCAAGACTGAAACATCCGGACCAAATCTCACAGCTTTCCTACACAAAACCCTGCATTGACTTCGTTACTCCTCCCCTCCAGTGGAATCGATTTCCTCTCAGTCAGAATCTAGAACGCCCGCGCGACGTGCTTTGACCAATGGGTGTGCAGAAGCGCCACCACGTGAGTCCGGGGGCGCCCGTGCGTTTTGCGGCTTCCACCCGCGTGCTCCTGGCGTGCTGCGGGTCTCCTGGTTAGAGATTCTGACTTTACTGGGTGAGAATGAGAGGCCGCGTGGAGGGGAAGGCAGTCCCCATGCCTCCAGCGAGAAAAATCCTCTTGGCTTGTCCGGCCAGTTCAACTGTCACCCCAGGGCAACAACCCAACTGATTCTAGGCAAGACCAGCAAAGGAGTCACCCCCTAAACCCGTGGAATTGTGAAAAGTAACAAGTCAGTTTTAAGCCCCAAGAAGTAGGGTGATTTATCTTGCATAGACAGCAAATGAATAT TCONS_00215799 r 5' 0 TCONS_00215799 r 5' 0 EMBV3_36542 ATTTTAATTTAAATAGCTTAATTTGGAAAGTCACAGCCAACTTACTTTTTGTGGGTTTGT Gene GeneID:507297|HEATR5A:XM_002696697:76_cdna Constitutive 2 NULL GeneID:507297 21 GENE HEATR5A NULL HEAT repeat containing 5A EMBV3_21549 GGCCCCCAGCCAGCGCCAGCATGCAGAACAGTGTCCAACGGATGTGTGAGTAAAATTCTG Variant GeneID:286857|PAX6:NM_001040645:11_cdna 429^559 1 EMBV3_13199 GeneID:286857 15 GENE PAX6 pax-6 paired box 6 EMBV3_30505 AGAGGTTGCCTTTATCAAGAACATCAGCTCACCCCCATCACTATCTGGAAGCTCCATCCC Gene BVV0102_206773 + 1 EMBV3_06242 GK000008.2:71891090-72265566 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20339 GACTTCAGTCATGTCTAATTTTGCTAGGAGCTTGTATACCTCTGGTCAGGTGAGTTTCCC Gene BVV0102_067307 + 0 NULL GK000030.2:19511365-19576178 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246512 TCONS_00246510 TCONS_00246509 TCONS_00246514 TCONS_00246511 TCONS_00246513 TCONS_00246515 1 XLOC_151011 Coding TCONS_00246509 XLOC_151011 Coding Coding MMGT1 X:19571563-19583649 j TSS184798 5061 3 TCONS_00246509_1 101 0.295396166765461 4 0.581547372776169 1.98132609362431e-11 1.35775294576325e-08 5.11366845727405e-07 1.28648632847194e-09 2.87308570912158e-13 0.000162864829996919 6.43136241747004e-05 0.000106388548260456 1.85432780052387e-05 1.34252415540872e-08 0.000256685656268866 3.94061924989035e-05 0.000102989499810455 1.0672961526803e-15 2.39402678091941e-08 0.00546366864821701 0.000543793448582551 0.00276216390590683 3.04822523330101e-05 5.04974175579823e-06 9.8052947519394e-08 0.00160146015128011 0.00270243170320757 0.000253107876191044 1.24915284318372e-07 1.48060765954323e-05 8.15891394180461e-09 0.000339825186350451 0.000123218193310606 3.97008351769516e-05 XM_005227554.1 MMGT1 PREDICTED: Bos taurus membrane magnesium transporter 1 (MMGT1), 0.0 6433 100.00 0.704603833234539 NM_173470.1 MMGT1 Homo sapiens membrane magnesium transporter 1 (MMGT1), mRNA. 0.0 1424 86.26 0.236514522821577 TCONS_00246509_1 sp|Q32LC4|MMGT1_BOVIN MMGT1_BOVIN Membrane magnesium transporter 1; 2e-69 209 99.01 0.99009900990099 1 noncoding 0 0 0 0 0.210547169926633 0.165253749343811 0.00684015784849136 0.900878575417791 ATACATCGTTCTTATATGCGATTAACAGAAAAGGAAGATGAATCCCTGCCAATAGATATAGTTCTTCAGACACTTCTGGCCTTTGCAGTTACCTGTTATGGTATAGTTCATATTGCAGGGGAGTTTAAAGACATGGATGCCACTTCAGAACTAAAAAATAAGACATTTGACACACTAAGGAATCACCCATCATTTTATGTATTTAATCATCGTGGTCGAGTACTGTTCCGGCCTTCGGATACAACAAATTCTTCAAACCAAGATGCATTGTCCTCTAACACATCATTGAAGTTACGAAAACTTGAGTCACTGCGTCGTTAAGATTTTTACAAATTATAATAACAGGACAGGACACAAAGCTGGAATATTGGAGTTTGGGATACAAAACACTCCCCCATCAGTATTTATATTGATCGCTCAGACCTAATTAAAAAAGTCTACAACCCTTATTTGTACACTGTTAATCAAGTCATTAATGCAGTATAAGTTATCTGTGAAATGAGTCTTTGATCTTTCATAGAATTCTTTTTTCATTTAAAACAAATTCACATTTTTTGTAAAAGTCACTGTTTTGAGCACATTTCTTTGAAAAATGTTGATGGTTTTGTAATTATTTATTTTCTTAGATTTCTTTTGCACTACAGTTTTTAGGATCCTTTTGGAAATAGTGTGACTACTGCATTTTGCAGCATGAATGGTAGTAAATGGTCTTAAGTTCTTAACAACAAATGAATTTCTCTAAAGAGACCAAAATGGTGACTTACCAGTTTTTCTTATGCCCCCTAAAAAGTGGCTCTGCTTCAGCAGATACTTGCCAGTTTTTAATTTATCCATGAATTCTCACCCTACCCTACTCCCATATACCTCCTAACATCAGCTGTCTTGTTTCATCACTTCTCTGGGATTCAGTGTGCAGTGAGCAATTTTTATGTCAGAAATCCCGTCATAACAAATAGATTTAACAAACTCAACTTACGTAAAGCTACCTGTGTTCTCTTCATGTATCTGTAAAACAATGTCCCTAATTGATTATATAGTGTAAGAATAGTTGAAGATAGACCAGAAAGACCATCCGTGAATTAATTATCCTGCCTATGTAGAAGAACAGTAATCACTGAAGAAAACTGATTAGTTGTTACTAACCAGTTTAACTTATTCTAAGCCTCTGTTATTTTATTGCATAATGAACTTGTGAATTAGTTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTGGGCTGCAGTCCATGGGATCGATAGGAGTCGGACACGACTGAGTGACTTCACTTTGACTTTTCACTTTCATGCATTGGAGGAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGATGGGCTGCAGTCCATGGGGTCGCTAGGAGTCGGACACGACTGAGTGACTTCACTTTGACTTTTCACTTTCGTGCACTGGAGGAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTGCTGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGCAGCAATGAATTAGTAATAATAAAGGAAACCTTATTAAAGGTAGATCTCAACAGAATTGGGCCAAATATGTTCTAAATATTTGGAACTAATATCTTTTAATTTAAAAATTAAGGTCGTAGCTTCCAATTTGTAGCAGACTTGGAGTTTTCTGTCTTCATTGTATGTTGCTGAAGGTGAGGATGAGGGTACAGACTAGAATTTTTTTAGAAATAGCAATTTTAGGGAAATTTGGCTAGCTCTGATCTGCTGGAAGCTTAACATTTCTTGGTAGAGAACGTTGCTTTTGTTGAATTGTATAGGTGTAAAGGGAATTTAAAAAGGAAATGTGCTTTAGGCAAGAATCATAAGATGCCCTTATCGTTGATGGCTTTTTTTCTGCTAGTAGTAAACCTCAGCTCTTCTGCCTGGTAACACACAGCCCAAAGTACAAGATTATTTTGTCAGTGGGTTTTTAATCGTTGTTTAGTTTTGTTTTGCTAACCTTTTAATCATTGTTTAGTTTTGTTTTGCTAACCCAATCTATCTGTGGAACACTGACTCTGCTCTCTAAGGAGAACAAAGTTAGAAATCTAAAATAATTTAGAAATGAGTTTAAAATGTGAAGTCAGGAGTTAAAGTCATATAAATCGAAGTAGTGTACGAGAAACAAGCTCCTTCCATCATGCCTGTCTACCATTTCCTCAGGTATGACTTGATTTGCAAGATCCTCTTGTTTTCTTCTCTTTTGAGGCCTGTCTTCCTTTCCTAGTATGTTTTTATAATAAATTTATTAAGATATAAATCACATACCTTACTATTTACCCATCTAAAGGGTACAATTCAGTGGTTTTATAATGTATTCACAAAGTCGTGCAAACATGGTCACAGTCAATTTGAGAATTGTGGCTGTCACCCTGGAAAGAAACCCTGTACCCTTTAGTAGTCACCTGTCCTTCCCTCCCAGTGCCTCCCAACCCTGAGCAACTAATCTTTCTGTCTGTGCAGGTTTGTTTCTTCTGGTCATTTAGTATGATTGGATTCCCATAGTATCTGAACTTTCATGGCTGGCTTCCCAGATATTGTTTAGTTCTATGTGGAGTGAGAACTTCTCATGTTAAGAACTGTGAATTCTCTGAAAGGAGGTGGTTGGTAAGAATCACTAGATGTAAGGAGGCAAGGTCAGATTCCTAACAGGTTTCTCAGTCAGTCGGATGCTGAATAGGTTTTTTCTCAGAACCAAGCATTCATGATGTGTTAATATAATTGTTTGTCTAGTCTCTAGAATGGATATTGAAATCTTTGCCTGCTCAGGATAGTCTTGCTAAAAATGATGCCAAATAATATGGCAAGTAATTGACATAGCAGACTTCAGTCATGTCTAATTTTGCTAGGAGCTTGTATACCTCTGGTCAGGTGAGTTTCCCAAATTTTTAATTTCCTCCAGTGAATTTATGCTCTCTTTTTAAAGTATGTACCATAGGATTGGGGTGATTTGGATGCATCATAACAGTGCTAAATGAATTAAGTTCAGAAGTTTTTTGTAATGCTGTGAGGCAGTACTAAGGTAGCCAAAAATGTAGTGATGTGAGCAAATTAAGCCTGCAGCTGACTATGATTTCAGTGACATTCAGAAGTGTGTATTGTTGAAGGCTCTCTAGAATATAGGAAGGCTCACTTAATCAGGGAAGCAGCCGAATGCTATGGCCTAGTGGCCCAGCTGCAGAAAATGCAGGTCGGCAAATTGGAGGCTGTGAAGCTCTGTAACTCCCTAATGATTGTTTCCTGAGCATTGTGGCTTATTTTTGAGTGGCATGACAGCATCCCCCGGTTGTATGTGGCCTGTTTCCATGATGTATTGAGTAGTGTTGTTTGTTGTGAGCATCAATGCCTGTAACACCAAGCTAAACACATTCTTTTGGATATGTTTCCTCTCTTTAAATGATCTTGCCCTGTCCAATAAATAAATGATTGTCTCACCCTGTTTTTGGTAGTGGTTTTTTTTGTTGTTTTGTTTGTTTGTTTGTATGTTTTACTTTTAATCTCATTTTCTTCTGCTTCTCTGTCCCCAGAAAAATGTAAGATTTAATTTTAACAACTGTATTTTTTCTAGTGTGATGCTTTTACTAAATTCAATGGATACTTTACTTTTCATTATACATGTAAAGTCTTACTGCAATTTTATGCTCTTTTAGAGTTGAAATAGAATGTGTAATCTCATTTATATTTGTATTTATGAATTATCAAATACCCTTTGGAGTACAAGAATATTGGTCTTCAAGCAGCAGTGTCTAATCATTCCAGCACAAATTTGTTATATAGCCAAACTGCTATTACAGAAATGGCAATTTATACTTCATAGGAAATCATTATGATTGAAGCATCAAGGGGCAAATCTAAAGTTTAATCCAAGAGGAATTTCTGATTCTAAAAGCATGGCACTTGTCTGCAGTAGTTTGAAAGATAGCACTATTAGTATTCAAATCTACATAGGAATATCTCAAAATAACCTACTAATCAAGTGTTCTTTTAAAAAGAAAAAGAATATATGCACATGGCAAAAAAATCAGATGGTACAGAAAGGTATGAGATTAGAACTTGCTCCCTTTCTTCCTGCTCCTAATAACCTCTCTCCAGAGGTAACTAGCTTTAAGTGTCTTGTATATTCTTTCAGGAAAAAAATAATTTGCCAGCAAGTGTATACATAAAAAGTTTTTACATTAATGGAATAAGACTGTATACACTCTCTGTACCTTGCTTTTTTTTGCTGTGTCTTATAAGATCTTTTTGTATCTGTATATATAGAAATACCTCATTCTTTTTAATGACTGTGTGGTATTCTACTATATATTGTGTTACAAATGTTAAAACATATAGACTTCCAGGTTGTTGGCAGTATTTTACTGTTGATAAACCATATTGTGATGAATTTACTTGTACGTATAATGAGTTTAACCTAACAAGGTTAATTCCTAGTAATAGAATTGCTGGGTCAAAGGATAGTTTTCATTTTCAGGTCAGTAGGTATTGCCAAACTGATCTCCAGAAATCTGCCTAATTATACTTCCACATATAATGTATAAGAATAATTATTTATGAGGCCCTTACCAATATTGGGCACTCAGCTTTTAAAATTTGATCATCTGAAAGTGAATAAATGGTACTTTGCATCTTAATGAAGTTCTAATGCATTTTAATGAAGGAGATGGAACACATTTTCATGTTTATTGGTTACTTATATTTCATTTTCTGTGAACTGTGTGGTCATGTTCTGTTTTCGATTCGATTTGTTTTTATTAGTTTGTATGAGCTCTTTGTATGCTAAGAAAATTGGTCTATTGTCTTATGTTTAATAATATTTTCCTGAGTTTTATTTATTTATGTAGTTAAACTTACCAGTCTTTATGGCTTCTGGGATTTGTGCCTTGCTTTAGAAAGGCCTTTACATTTAAGAATAAATTTAATGTATTTTTTCAG EMBV3_22920 TAGCAATAGCCCTAAGATTCACTTCGGTGAGGTCAGCCTGGGTCACACACCCATCCCTAG Gene GeneID:539884|RFX5:XM_002686042:242_cdna Constitutive 2 NULL GeneID:539884 3 GENE RFX5 NULL regulatory factor X, 5 (influences HLA class II expression) EMBV3_43713 TGTCACAGAACTATGCTGCCTGAAGTGATCTTGGCTCCTTAATGGTTTTTGGCCACTTCG Gene GeneID:507095|SPRY1:NM_001099366:17_cdna UTR3_Alt 1 NULL GeneID:507095 17 GENE SPRY1 NULL sprouty homolog 1, antagonist of FGF signaling (Drosophila) EMBV3_02238 GCTGAGATTGCTTTAAAATCTCTTCTTCTGTTCCCCTCAACATACCTCTGTGAGACTGGG Gene GeneID:538046|SCAND3:XM_002684936:99_cdna Constitutive 0 NULL GeneID:538046 1 GENE SCAND3 NULL SCAN domain containing 3 EMBV3_31166 GATCCCTGGTCTAGGAGCTAACATTCCACTCGTGGTGAAAAAAGCCAAAACAGAAAGCAG Gene GeneID:525898|KAL1:NM_001083705:14_cdna UTR3_Alt 1 NULL GeneID:525898 X GENE KAL1 NULL Kallmann syndrome 1 sequence EMBV3_08414 AGTGTATTGTAGATCCACTGATTCAAAGTTATGGAGAGCAATTTTTGCCTCTGAATTTGG Gene BVV0101_033762 + 1 EMBV3_23523 GK000002.2:120279664-120311156 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08108 GCTAAGCGCAATGTGGACCTTCACCCTAGGAACAATAGCATGGTGGATGTTTGCCCAGTG Gene GeneID:507679|GNL3L:NM_001034307:14_cdna Constitutive 0 NULL GeneID:507679 X GENE GNL3L MGC127373 guanine nucleotide binding protein-like 3 (nucleolar)-like EMBV3_41951 GAGGAGCCTTCCACCAAAAGGGAGCATCAGGTTGGGTCCCAGTGGAGAAAAACAGCAAAC Variant GeneID:767986|C5H12orf29:NM_001077047:53_cdna 248^578 1 EMBV3_33999 GeneID:767986 5 GENE C5H12orf29 C12orf29 MGC128722 chromosome 12 open reading frame 29 ortholog EMBV3_27891 AGGACCTAAGTGTGAAATACCCTGAAGACCTTCCCATCACCCTTCCCAACCTGCTGCGGT Gene GeneID:513509|TXNDC11:NM_001083420:150_cdna Constitutive 0 NULL GeneID:513509 25 GENE TXNDC11 MGC138039 thioredoxin domain containing 11 EMBV3_11259 GCCCCAAGGAGTAATAAACAATTCTCCTGGTAAGTTGGAAAACTGGTTTACAAATGCTTG Gene BVT0102_414730 + 0 NULL GK000006.2:6020469-6145191 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206655 TCONS_00202378 2 XLOC_125176 XLOC_123958 Coding TCONS_00206655 XLOC_125176 NonCoding NonCoding - 6:5591352-5592959 - TSS154162 1607 3 TCONS_00206655_2 63 0.119477286869944 1 0 0.000168423213843127 0.000199423273549417 0.000309701582526159 0.000381532134771361 0.000270720492137565 4.30561888030857e-05 3.28764680663706e-05 0.00057391044491509 0.000542012403169677 0.00306108884369139 0.00116133334276967 0.00153155934290875 0.000513572234855401 0.00114846829909202 0.000871159779552619 0.0205021138209903 0.0138922875080888 0.0122678080820753 0.000119228571838162 6.38036842814999e-05 1.36732190838709e-05 0.00829266195752083 0.00840765446131062 0.013481895997829 0.00021332365788055 0.000129890194183436 0.000267666223374023 0.00313874313189712 0.00366242241004156 0.00498906156846834 XM_005207577.1 MAD2L1 PREDICTED: Bos taurus MAD2 mitotic arrest deficient-like 1 (yeast) (MAD2L1), transcript variant X1, mRNA. 0.0 2679 98.20 0.96764156813939 XR_112596.2 LOC100507033 PREDICTED: Homo sapiens uncharacterized LOC100507033 (LOC100507033), misc_RNA. 1e-09 69.8 70.89 0.088985687616677 0 noncoding 0 0 0 0 -0.0526404600929106 0.672976002068289 -0.0518867388033559 0.499987841900416 ACACGCAGATAAGCACAACAGTGACAACAATCATTTGTTCTCCTTCAAGCTGCAGGTCAGCAGATTGCGTCATTCTCGCTTTACTGCTGAAGAGGCACAGAACTCTGAGGCTTCGCTTCAAACTTGTACACTGATGCTTTTCCACATTCCACTGACCAAGGCAAGTCTTATGGTTAAGCCAAACTTCAGCGGGAAAGGGAAATACACTCCTCCCCAGGAGATGGTGGGGAGAGGTGTGAAAATCGAATGAAAGGCTCTAATAGACCAGGGATTGGCAAACTTTTTCTGTAAAGGGTCAGTTTAGGCTCTGCAGCCAATATGGTCTCTTGCACCTACTCAAGTGAGTCAGTTGTTATGAAAGCTCCTCAGACAGTAAGTAAACGAATGAGCATGGCTGTGTTCCAGTAACAAAAAGCTGATGTGCTGTATTTGGTCCATGGGTTACAGTTTGCTGACCCTGTAAGAGATACTTTTGCTCTTTTGTTCGCAAATGTTCAAACCTGTCCCTGGCTCAAAGCAACTGATTCTCTGATACTTAAGGCTCACATTTAAAACATCATTATTTATTGAATCTATCCACAGTACCTCAAATGGGATGGCCCTCTATTTCATCTCAATCCCATATTGAAACAACTGGCTATTTCTTTGAGGTACTCCTCAGGACACCCTACAATAAATTTTTATCTGAAAACTTGGGAAGGGAGCCCCTTTGGCATATGACGCCTATGAAGAGGTTGAGAACAGCGAAGATGCTACATGCTTCTATTTTAATCACTGTATAAACATGGATGCTGAATACATTTTTATTACCAGTATGCATTCAGGTTCTTAGTTTCCTAACCTCCTATATGTTTTGTAATTATGAACTGAAAAATTACTAGCATAATAAAGTAGGTATCCACACACATATTTAATTTTTTCTTTACCTTCTGTTTCATGTAATTGTAAGATTCATCTTAATGTTATTAAATGTGAAAATTCAGGATAGCTGAAATAATGCTACATTGTAATACCTAAGTTTTCCACCAGGTGTCACTAATACTGTGAATTTCTTTTGACTCTAAAGACTAATATTCAGCTTTTCTTACTGAAAGTTAACATTGGGACTTCTGGCTACAAAAAGACGTCGGGAGAGAAAACACAGCATCTGTCCTTTGCTAGGCATTTTACATGAACTGTTTCATTTAACTCCTATGCTTTAGTGCACAAAAAGCACTGCAGGGCCAGTGGGCATGCAGACAGCACTATGTTTTAACGTTTGGATGGTCTCCTTTGTCCATGGCCACAGAAGTTCATTTGACTCCATACCAAGCACATCGAAAGGAGTGTTTCCTCACCATTTTCTTAGTGGCTCTTACCGTCTACATCCTGTTAGCAACTGAGTGTCCAGAATAAGTCGGTTTTCCTTTACTGGGCTTTAAGTTTCATTGGTGAGTTTGTATTTCCACCTCAGATGACTCTGACCAATGATGGGCAGCCACCAAAACACAGAGGACATTTTCCTATACCTTATCTATAGTGGCTATGGAAAAAAATCAAGTATGAATTTTCAAGCATTTGTAAACCAGTTTTCCAACTTACCAGGAGAATTGTTTATTACTCCTTNN TCONS_00202371 . 3' 1871 TCONS_00202371 . 3' 3477 EMBV3_11973 AGAGTTGACTGGAAAATCCAGAAAAGCTCAGCTGGAGCACAAGGAGCTGCTGAGTAACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31909 GGAGCCAAAGCAACTCGCTTTCTACCGCTGAGGTGAGGCCTCGATGGAGAGGTTCCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36829 TGAGGGCCTGAGTTCCATCCCTGGTCAGAGTACTAAGATTCCACAAGCTGCATGGCATTG Gene BVV0102_275734 - 1 EMBV3_23353 GK000002.2:107711676-107722664 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17526 CCAGCATGCCGCGAGACTTAAGTTGTTAGTCTTCCCTCATCTTTTAAGCTGACAGGGAAG Gene GeneID:528655|PDK1:XM_002685323:183_cdna Constitutive 3 NULL GeneID:528655 2 GENE PDK1 NULL pyruvate dehydrogenase kinase, isozyme 1 EMBV3_26195 CAAGTCAGGCCCGCATGTGGGGAGCCAGAGAATGGCTAACGGTGCTCCTGCCATATTAAA Gene GeneID:509882|MPP3:XM_002700026:113_cdna Constitutive 2 NULL GeneID:509882 X GENE MPP3 MPP3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) EMBV3_04950 GCTGAGGACCTTCCCAGAGGCAGTCATTGAACCCAACCTGGAGTGGCGAGCATCAGAAAA Gene GeneID:282862|BCAM:NM_174741:68_cdna Constitutive 0 NULL GeneID:282862 18 GENE BCAM LU basal cell adhesion molecule (Lutheran blood group) EMBV3_29366 TAAGTATTTGCCCTGGGCTAGCCTCTTCATGTAATGCCCCATGTGACTTCCACAGCAGAG Gene GeneID:100137838|LOC100137838:XM_002698140:525_cdna Constitutive 1 NULL GeneID:100137838 25 GENE LOC100137838 NULL similar to tripartite motif protein TRIM4 EMBV3_00211 CAGCTGCAGGAGGATGCAAAAAACTTCATCACCCGAGAGAATCTGGAGGCGCGGGTGGAA Gene GeneID:516004|MRPS26:NM_001034514:1096_cdna Constitutive 1 NULL GeneID:516004 13 GENE MRPS26 MGC128354 mitochondrial ribosomal protein S26 EMBV3_41275 CCAAGCACTCCATCTCTTGAGGGGGACTCTGGTGTGTCCTGCGGTGATAGGATCATGGAA Gene BVV0102_073175 + 0 NULL GK000001.2:68420955-68464485 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35988 GGAGGTGGTTAAAAAGGCTTAGTATGGAATTTGGGCCTGGGTTAAGTGATTTGGGGGAGG Gene BVT0101_070708 - 1 EMBV3_36237 GK000025.2:35173862-35186321 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147017 TCONS_00147018 1 XLOC_089269 Coding TCONS_00147017 XLOC_089269 Coding Coding PRKRIP1 25:35145056-35175705 j TSS109795 5451 2 TCONS_00147017_2 144 0.273160887910475 6 0.822337509788567 0.00158886557030902 0.000128065156208757 0.000109712613958994 0.000285807154461923 0.000658692214998767 0.000228217118696412 0.000127942994573205 0.000465078653224394 0.000234295956369006 2.91649618315545e-32 2.29120584380445e-06 1.41492008452797e-05 2.91829532380348e-10 0.000382024526561904 3.06128051250253e-08 1.1169424417313e-19 5.24859022637608e-16 2.05985003379587e-24 1.32701022231363e-08 0.000852848455911459 8.22196299787196e-08 1.61177242630015e-21 1.96985114537816e-12 3.13311921648805e-05 0.00021961114205948 0.000747931656002273 0.000201078789785447 1.82001397614867e-47 2.8659167724127e-05 3.40589071901626e-06 NM_001079641.2 PRKRIP1 Bos taurus PRKR interacting protein 1 (IL11 inducible) (PRKRIP1), 0.0 1600 99.12 0.165657677490369 NM_024653.3 PRKRIP1 Homo sapiens PRKR interacting protein 1 (IL11 inducible) (PRKRIP1), 0.0 728 87.42 0.107686662997615 TCONS_00147017_4 sp|Q2KIT1|PKRI1_BOVIN PKRI1_BOVIN PRKR-interacting protein 1; 1e-90 265 99.24 0.984848484848485 1 coding 0 0 0 0 0.00833376940026576 0.972260835396551 -0.00727475777609607 0.900990621824723 CAGCCAGCAGCTGTCTGCCAAGCACCAGCTCTGGGCCAGACCCTGAGCTGGGGTATCAGGGACATGGCTGCCCTCTTAGCTCTGTAACTGTCTGTTCATCTACTGTGGTGTGCACTTTCATTCATGGAGGATCCATTTCTTTACTGAGTGTTCATTCATTCTTTCTCATACTCACTAACTTCCTCATTCACTCATCCATCCATCACTAGGTTATCTCAATTGCATATTCATTCATTCTTTACTTTTTCAGACTCCTTTCCTTCCTCTCTCCCTCATTCCTGTGTTCTGCAAGCATTCTAAAAGCACCACTCTAAGCCAGAATTAGATGCTGGGTTTCTGGCACAACCCTCTCCCCAGACTTCTAGGTAGACAGACGGTGAGGACACCCTGTGACTGCCACATGCCAGCCATCGGGACTCAGAGCAGGGGGAGCACCAAGAAGGGAGCAACTGACTGCCTGGAGGAGGAGGCTGGGTCGGGGCAATCAGAGAAGGCTTCCTAGAGGAGGTAGCATTTAAACCACACTAAGCAGGGTGCAGGGCTTCCCAGGTGGTACTAGTGGTAAAGAACCCTAGAGCCAGTGTAAGAGATGTAAGAGGTGCTAGTTTGATCCCTGGGTTGGGAAGATCCCCTGAAGGGAGGGCATGGCAACCCAGTTCAGTATTTTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGAGGGCTACAATCCATGGGGTTGCAGAGTCAGGCATGACTTAGCAACTAAACAACGAGGAGCACACCTGTAGTTGAACAAATTGAGTTTATCGCCTCAGTTTGAGAAGGAAGACTGCATTTACCTCAGTAAGACAGTGTTTAGGGGATTCCCTGGCGGTCCCCTGGTTGGGACTCCACACTAGAGTTTAATCCTTGGTCAGGGAACTAAGAGCCTGCAAGCTGCACTAATGGCCAAAAAGAAGGGTGGGGAGGTGGTTAAAAAGGCTTAGTATGGAATTTGGGCCTGGGTTAAGTGATTTGGGGGAGGATTTGAGTAAATGGGCTTTTACTCTGGAATAGATGTTAGGAATCAGGGACAATTTTATGATTGAAAGCCTTAAATATTTAAAGTCTAACCGGATAAAGAAGCAGCGGTTACTCATATTAGTCAGAATGGGGGAAACGTTTGGTCTTTTTCTTGTTCCAACGATATTCTTGTTTTCATCCGACTTTAAACGTGATTACGGAGCAGTCTTCTTTATGCCTTGCGACATCATGGCCCTAGAATGGCTTTGCACGACAGTGGTGTTTAGGAAATTGTCTATGTCCAACAGGAGAATCCCAAGGTCTAGCTGTGAGTGCCAGGCCAGCTCCCAGATGCAAGGGGCAGCGCTCCTCTTTCTCTTAGGAAAGGCCCGTTCACGCGACCGAGGTGTATCTGCTGGGTGCCAGGCGCAGAGTGATTCGAAGCGGGCAAAAGAGATACGGCCCCAGTCCTCCGGGAGCCCACATTGACGTCGGTGCTGTCTTAAACAGATCGTCAGCAAAGGCAGAGGGAGTGGACCAGACCCAAGGAACAAAGGCCCGGGTGAGGGGGTGGGGGGTGTCGAGAGAGTTAGCAGGGTGGTGGGCGAAGCCACAACTCGCGCCGGGACTGCAGAGGTCGGCGGGGGCCAGAGCACACAGGGCCACCTCTCCCCCAGGAACGTGGGCGTTCGCTGCGCTGATCTGCTCAGAAACAGGGAAAAGAAATCAAGCCGCTTTAATCAAAATAACCCACCCGGGCCTCGAGCTTATGAATATTCAGCAGCCTGCGGGCAACTCCGCTCCCGCCGCGCCCACCTAGGAGACTGCGGTTGCGTCACTGGCGCGCGACTCTGTCGTCACACACGCGCGCCGCCGCCCGCCTGGGAAGGCAGCTGTCATGGCGAGCTCGGCGGCCTCTTCTGTGAGGCCGCCGAGGCCCAAGAAGGAGCCGCAGGCGCTCATCATCCCCAAGAATGCCGCGGAGGAGCAGAAGCTCAAGTTGGAACGGCTCATGAAGAACCCGGATAAAGCAGTTCCAATTCCAGAAAAAATGAGTGAATGGGCACCTCGACCTCCCCCAGAATTTGTCCGAGATGTAATGGGTTCAAGCGCTGGGGCTGGCAGCGGAGAATTCCACGTGTACAGGCATCTGCGCCGGAGAGAGTACCAGCGCCAGGACTACATGGATGCCATGGCTGAGAAGCAAAAATTGGATGCAGAGTTTCAGAAGAGGCTGGAAAGGAATAAAATTGCTGCAGAGGAGCAGACTGCAAAGCGTCGGAAAAAGCGAAGTTGAAAGAGAAGAAATTACTGGCAAAGAAGATGAAACTTGAACAGAAGAAGCAAAGTGAAGCATCCAGTGAGACCCAGGAGCAGCCATCCAGTGGCTCCGAGGAGGCATCTGGGACGGAGGACGAGGAGGAGGATGCACCCAGCTTCGTCACGGGGCGATGACGGGGCTGGCCCCGCAGCTGTCTGAGCCTGGCCCATCCTTGGCCCGGGGCTCTGAATGCCCTCCCAAAGCCTCATGGAGAGACGCGGTGGGAGCTGCTCCCGAAGACTCTCAGCCCCACTGCGGGCAGGACTCAGCCGGCAGGGAGAGGACTAGCCTCCTGGACGCTCGAGGGCGCTGCCAAGTGGGGTCCGTTAATGTCCTTGTTGAAAGGGGGGAACCTGGGGCCTGCTCTCACATAAGTGGACGGTGACGAGCTTGGCGCTGGTTTCTGTGAAACGAATGTTTAGTAAAGAACAGAAAAACTCCAGATTTTGTTCAGATCTGTGACATGCTAATTACAGAAGCTGCAGAGAGGCTGTGACGTGACACAACGGAGCGGGCTGGTCCCAGACTCAGGAGACGGCCTCGGCTCTGGAAGGAACACTCACTGCAGGGCGTGGGGCCTCCGTTTCCTTCAGCTGAGGGTGCAGACTGCGCCCCAGGACTTATCTCCTCTCCCCGCATCCCAGCAGCTGCAGAGGGAGACCTGGGACTGAACCCGGGGCAGAGCCGGCAGAGAGACCTGGCGTGTGAGGAGGACTTCAGAAAACCAGCTGGTCATAGAAAGTCAGCAGGTAGAGGAGCCAGGCTGGGCTGGACCAGAGCAGGTGGCCCAGGGGACCCCGCTGGGCCACTAGAGAAAGTTTGATATAATCAAGGAAATAGTGGTTTCGAGTGAAGGGAAATGAGGAAACATCTTAGGTTTCTTGATTCCCTGGCTCCATCCTGAGCCATGTGGCGTCTGTGATAACGTCTGTCTTTCCACAGTTTAAGTCACAGGAAGTTTCTTTCCCAGGAAGCTGAAATGGAAAGTCAGCCCTCATAATTAGCACACAGCCTGACTGTCTGTTTTGAAAGTGGTGTTTCTCTTTCATTAGGGACTGACCGTTAGTTCTGTGTCCTCCTGTCTTTGAACTGTTGGTTTCCTTTGTCCCCTCAAAGTGTGTGTGTCAGAGCTCGTGCTTCGAGCCTGGAGCCCTGGGATTGAGTCCTGGCCCTGCCTCTGATGGGACAGAGAACTCCGGGCAAGTCCCTGCCCGGTGCCCCCAGCCAGGAGCTCGGAGCTTCCACAGCAGATGTGTGCCGGGCAGGTGGGCAGTGACTAGACTGGTGCTTGTCTTTACCTTTACTGGATGTCAGAAGACGCTGCTCAGGGAGATGCCCTCCAGCAGTTCCTGGTGATGTGCAGTGGGCTTTTAGTGCCTTAGGCTGAATGATTTGCAGGCTTTCTGTTACCAGCGGGAAGCTTGGATCCACTCTCCCAATCCACTCAGCAGAACCAGGCGACTGACACCGTACTTTGTGTTACCACAGCCAAGTTCACTGCAGGGCATCAAGCAAGGAGAACAGGCCAGCTGGTGCTCAAAAGCCCAAAAGACTGCGAGGGAGAGGGGCACAGGGTGCGCCGTCAGCTCATGCACCATTCTGATTGGTTGATGGTGAGCAACTGGGTGATGTCTGGGGACTCTTAGCTTTCTGGTTCCAGCCCGTCTGGAGTCTACGTTGCTGGTGGTCAGCAGGCAGGTAACTTCTTTCACCTCGTGGGAAATCTTAATACCTGCAAAACAACTCAAGGGTGTGGTTCAGGACACTACTTATAGCCCGTGAGGAGGAACTGGATGGCCTTGACTTTGTTTGTGGCTGAATTATTTGTCTTTCTTGACTGCTTTCCTTTGTGTCTTCATTTTCTCATTTGTAATTAAATTTGTGCAAGAATGTGGGAGAAAGGCATTGACTTTCTTTTCATTTTCAAATTCTTTTCATTTTTAAAAGAATTCTCAAGTTGCTTGGTGCCAGTACTTTGTATTATGAAAACATTACCTCTCTGATGGCTTTGTCACAGCACCTGGACAAACGCTTGAAAATCAGACACAGTACAATGAGGATAGAGATCCAAACGCACCTGCCGTATACCCAGAGTCTGTTATAGATGGCAACCAGGAAAATCAGTTTTGGGGGTGAGTCATTTTTATATAAATTCTGTAACCAAGGAGTCTTTTGAATTAACTCTATTTGGGTTTCAGCTTCTCCAGGGCTATTTTTTTAAATATATATGTGTGTATATATATATATATATATATATATATATATATATATAAAACAGGAGCTGTGGGCCACTGCATGTCTCTTTTGTGGTTAAAATGTAAAGCAGTTTTATCATCTGGTACTTTTCTGCCGAAAGAATCTAGCACCTTCTGCCGGGAAGCTACAGCCTGAGCTGTCTTGCTAATTACTGCAGTAAGCTCCCTACATACAAACCTGCACATTTTGAACTTTGAAAGATGTAAATGTGTTCCATCCACCTGGGGCATGAGGGAAGCTGCACCTGCCCTCCGTCTCCTGTTGCTGACGATCCTTCAGCTCCGTCTCCCTCCTCCTGTCGGTGACTCTTCTTAGCTGCTCACTCAATGCCAGCTGTTGTATGACTGTACTTTTCAAGGTACTGTACTGTAAGATTAAAAATGTTTTTTCTGTTTCTATATTGTGTGAAGAGCATGAACCTAGCGCAGTGCTGTAGAGCGGCTGTGTCGGTTGGGCACCTAGACTAACTTTGTTGGACTTAGGAACTCATTTATATGTAGGGGACTCCCTGTATTCCTAAACAGAGACACTTCATGGCAGCTGAGAGTGTCCTTGAGTCTGATACAGTTCAGAAAGGTCAGGTTCTCAGTAATGCAGGAACATGTCTGAACCCATGTCCGTAATAGGCACCCAGGTCCATACTGAATGTCTGAACTACGGTTACGTCATTTTGATTTTGTAAATACATTCTTTAAAGTAGATGTATGCAGTGTATGTTTGACGAACTAGAACAGCCTGTATAAGGCAAAATACTTCTCTATACCTGGGGGTGTGAAAGTTGCCATTATTTTCCTCCTTTTGTTTGTAAATCTTTCAGGAGAAAGCACTGATGATTCAAAATACTTGTCCCTCAATGCTATAGGCCTCCTTTTATATATATTTATATTTA EMBV3_27317 GGTATTACCCTCACTCAACAGGTGAGGAAGCAAGAATTCAATATGTACCAGAAGCCCACC Gene BVV0102_321076 + 0 NULL GK000015.2:47171655-47185420 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061517 TCONS_00061516 1 XLOC_036998 Coding TCONS_00061517 XLOC_036998 Coding Coding FXC1 15:47182758-47186359 = TSS45752 3215 2 TCONS_00061517_1 124 0.149611197511664 3 0.107777777777778 0.000121593444080357 0.000131543796345082 4.57254703185547e-06 1.48112348963043e-05 8.80587301357892e-05 0.000140223194229341 2.11221437192284e-06 7.24242578657658e-08 0.000313870949151797 9.17355797472129e-05 8.71521046254252e-05 0.00021604317652037 2.33866832709148e-05 0.000139174018724877 7.68947647071719e-05 0.00100951408584051 0.00189433406945585 0.00391521831187271 0.000227751018808557 4.83147164530688e-05 1.03994814584676e-06 0.000472117279845234 0.00161406986522586 0.000595717207699176 6.78133423971136e-05 0.00023092335838764 8.44481070940873e-05 0.000101529836708613 0.000134961971169989 0.000290334820452393 NM_001040530.1 FXC1 Bos taurus fracture callus 1 homolog (rat) (FXC1), mRNA. 0.0 857 99.58 0.148989113530327 NM_012192.3 TIMM10B Homo sapiens translocase of inner mitochondrial membrane 10 homolog B (yeast) (TIMM10B), mRNA. 2e-179 634 81.17 0.20248833592535 TCONS_00061517_1 sp|Q3SZW4|T10B_BOVIN TIM9B_BOVIN Mitochondrial import inner membrane translocase subunit Tim9 B; 5e-72 215 98.10 0.838709677419355 1 noncoding 0 0 0 0 -0.0834018829137359 0.582903891842417 0.00163696863690761 0.97127934226053 GTTACCAAGAACCTGAAAAGGAAATGACCTAGAGCTCACGCTGCTGGCGTGATGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATTGAGAAACCTGCGGGACTTCCTTTTGGTCTACAATCGGATGACGGAACTCTGCTTCCAGCGCTGCGTGCCCAGCCTGCACCACCGAGCTCTGGATGCTGAGGAGGAGGCATGTCTGCACAGCTGTGCCGGGAAGCTGATCCATTCTAATCACCGCCTCATGGCCGCTTACGTGCAGCTCATGCCTGCCCTGGTACAGCGCCGCATGGCAGACTACGAGGCTGCCTCAGCTGTGCCACATGCTACTGCTGAACAACTGGAAACCTCACCATCCGGCAGCTCGCCATCCGGAAACCTCGGGAAAGGAGGCGCTGGATGAACCCTCAAATTAAAGGAGCCAGTGGACCTAGGGCTGGGTGCAGCCTGTGTATAGCAAGTGAGGAGTTGTCCGAGAGCTGGGTACTGTTGCTCCTCTTCCTGGAGCTAATAAACCCACTTTTCCTCTGTTTGGTTTATATTCTGGGCAAGGAAGTTTTGCCCACATTGTTGGCACCATCTTTATTATTCTGTCAGTTAGTGCTTCAGCCCTGGAAGCATAGAAGTTGCCTTCCGAATGTAGAAGGAAAGCCTATAACCAGGCATCTGGTTAAAGCAGGGTCTAAGGGTAAAATTTTAAGATTGGTAATAGCAACAAGTTGGTTGCCCTGATGAAAGAAAATGGGAACTCTATCTAGCTGTCGTTAAATCTGTCTGACTGAATGGATCGCTTGGAGATATCTTGGAAAACAGATTAAGAATCCACAGGGCTTTTAGGCATTACCTCCTGGGAAGTCAGTAGCGTCAGACAGAGATGAAACCTTGTAAGAATTCAGTGGAACATCAACCACTTGAAGATGTTACTCGCTTAATATTTTCTGTCTTCTTAGGATGAGCAGTTAAATCTTTAAATAAAGAAAATCTGTGTTCTTGTCTTCAGGAGCAGTCAGAAAGGGGAAAACTCGTGGAACCATATTCTGCAATACACTCAGACTTGAGGGATAAAAACCTAAGGGAAAAGTAGGTGGTGATGGTTATGAAAAGAAAAGGGAAGAAAGTCAAATCTTCAGGACTTCTTGAATGTTACCTTATGTCTCACTTCTTGCCTATAATCTCCCAACTCCATCTCTTCCTCTACCCCTACGTGTTCCCGCTGTACCTGTTCTGTGATTTCTAATCCAGCCCCTCTGTTCTTTCCTTATTGTTGCCCTCCATGGAATTTTCTTCTGTATTCAACAATATGAATGGCCTGTCACTCCATCACTGAGTTTTCTTGCCATTCTTGTATCCTTTCTGTGTCATTCTGGCTGTTTTAACTTTTCTTCTGTTCCTCCATATCAAGTGACCATGTTTTATTTTTAAAATGGAAGTAGTTCTTAGACACTGGCTCCCACGGTAACCATTTTTTTTAAGTACAACCACCCACAAAGCAGATATTTTCACCCCTGTACATATCAGGATGTTGAAAATACAGATCTGACTTTAAAATCCATGTTTTCTTTACTCCACCAGGCTGCCTTTCAAAATATCTTTTGAGTACCCATTTTGTATAGGTTCTGATGTAGGTATTGCTAAATTGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCATCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCCTAGTGACCCCATGGACTGCAGCCCACCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTGCTGGAGTGGGGTGCCATTGCCTTCTCCGATGTAGGTATTACCCTCACTCAACAGGTGAGGAAGCAAGAATTCAGTATGTACCAGAAGCCCACCTTATACATGGTTACTTGTGGAGAAAAGTAGCTCTCTTTATTGGAACAAATCTTGTACAGGTTTATTAAGAACCTTTCTTAACAAAAAGTTGTTGACCAGGAACTTTCCTATTAAGTGGCCTCATGCTTGCCCAATAAAGTCTCTTGGAAAGTATAAATGCAGATGAAACCACTTGTGAATTTCCCAAGTCCCAAAGACGGAAACAGGGACCGGGAATACTGTGGTGATGGTTGAAAGATTATTCCACATCAACATTTATGTATATCCTTGCAATAAACTTCTGATGTGAATTATCTGTGTTCCCATGTCACATAATTGAGTAATTGCTGGAGAAGGGTTAACAACACAGATCTGACTCTTAACGCCTATGTTCTTTTTTTGCCCTTCTCTGGGTTCTTAGTTCCCTAACCAGGCAGTGAACCCCTGACCATAACTACTAGACAACCAAGGAATTATGAAGTCTATGTTCTTCGAACTTCCGAAGTTTGTTTGCTCATCTGCAGTCATCCTTTCCCTAGGCATGGAAAAATAAGTGTTTCTCAATCTGATCCACCAATTAGTTCCTTAACTTTTCAATCTCTTCTGTGTATAAATATATTCAGTACTTATGAAAAGTACTTATTCCTACTATCCATCTTCTGTTGTCACTGAAGTCTCCCTCAGGTCTTGGCATAAAAAGTGTTAGCCATTGGCATGAGAGCAATGTGACATTTCAAGCACAACACAATGATAAACATTGATAAAGCTTTATCATTTTTTCACAAACATACTTGAGACAGGGTTATTCTTGCCATTGTGGCTTTAGAACTTAACTGCCCGCTCATTTGTCAAGTCTAATTCCTTTGGGCTTTTTCAACTCTACCACCCTCTATTAGAACTTATCCTTAATAACTGCCACTCTCCTACTTTCCTCTAGTTAGACCTTCATCTTCCTATCCATCCCTTGATACTTTAAATGTTACGCAGACAGTCCATTCGGTGTTTTTGTCTCTTAGTTCCTTGGCCCAATCTCCAATGATTTCTGCTCTGTCTTAACACCCTTAGTTATATGTCCTTAGTTATAAGTTCCTTAGTTATATTGTCACCACCCTAAACTGCTCCATCTCAAAGCACTATTGCATCTTATTCACTGACTATTCCTCCCACTTTGTTTAATAAACTATTCCTCTACCATTTTTTCCCCCATTCTAGTCATTCTTTTGGAATAGGCTGAATTTCCTTTCATCTCTTTGT EMBV3_43464 ATTGTAGGCTTGGGTTTGCTTATTGTCTTCAGAGGAGCTGTACTTCTCAGTCCACACCCC Gene GeneID:785207|LOC785207:XM_002693325:197_cdna Constitutive 0 NULL GeneID:785207 15 GENE LOC785207 NULL similar to olfactory receptor MOR24-2 EMBV3_37001 ACGCGTCCCTCATCCGGACCATCATCGGCGGTTCCGCGGCGCACCTGTCATACCTGTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26756 GGAGACAGGTACATGCTGGTCACCTACGACGAACCCCCGTATTGCATCAAGCCATTTGAA Gene GeneID:784476|LOC784476:XM_002699601:115_cdna Constitutive 0 NULL GeneID:784476 X GENE LOC784476 NULL similar to Protein DDX26B EMBV3_13054 AGGTGGCGCAAGTGGTGAAGAAACAGCCTGCCAATGCAAGAGGCATAAGAGACTCAGGTT Gene BVV0101_019160 + 0 NULL GK000028.2:7941656-7946838 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161319 1 XLOC_098211 NonCoding TCONS_00161319 XLOC_098211 NonCoding NonCoding - 28:7943141-7944122 - TSS120651 981 1 TCONS_00161319_1 61 0.222222222222222 1 0 0 9.3118580856392e-07 0 0 0 0 0 0 0 0 0 0 0 0 2.5006129115853e-06 0 0 0 0 0 0 0 0 0 0 0 0 0.000401439584758994 0 0 XR_138606.2 LOC100848584 PREDICTED: Bos taurus uncharacterized LOC100848584 (LOC100848584), 1e-49 201 79.65 0.227319062181448 0 noncoding ACCTCCAAAATACTAGCTGGCTGGTCAGAAGAGTGGCCTGGAGACACATCTCCCCCCATATTTGTGACTGGTGTATTCTCATACAGCAATCTTGTCATACAGCAATACTGTCCCCATAACACGAAGTCTGGCTTGACTCTAGGGTAGATGGTGTCAAGTTATTGTAGGGTACTTATGGAAACATTTAGCTGACATTCCTAACCTAGTCCAAGAGCTTGGGAAAGCCCTTTTGCTTGAGTGATAATGAATCTGTGCATGTGTGCGCGCTAAGTCACTTCGGTCATGTCTGACTCTGTGACCATATGAACCTTCCAGGCTCCTCTGTCTATGGGATTCTCCAGGCAAAGAGAGAGTACTGGACTGAGCTGCCATGCCCTCCTCCAGGGGATCTTCTGAACCCAGGGATCGAACCTGAGTCTCTTATGCCTCTTGCATTGGCAGGCTGTTTTTTTACCACTTGCGCCACCTGGGAACCTGAGATCCTGTAAGACTGGAAATTTGATCAAAGGTACATGTCTATTGCCCGGACTGGGGTGAGATGTGAAGGTGCATATATATCACAGCAAAGCAGATGACTGATATCAGGGGATTGCACACAACAGAAAAAAAGCTTTTCCTTATATCATGCACACATACAGATTCTTCCTAGCCTTAACAGTGCACCTCTATCAGTTGATAGAGGTATGTCCTGAGCCACAGGTGGAACAGAAGACTTGTAAGGCCACACAGATGACCTGAGGCCTAGAACTTGACCCGGGGCAATCTGAGACTATGTGTCTGTTACCTTATGGCACTAAGGAAAGAACATGCTGTTCCTTCTGTTGTGCATTGCAGAACGCCATGTAAGTGGGAGGTGATTGCTATAAGATAAACCAAGCAACCTGCTGATACAAAGAACAGTTAGTGCAACTCCTGTGCCTCGGAATCTCTCAACCACTCTACGGTTATTCACTTGTAAACCATCTATAAGCACAGACTCCT TCONS_00160032 TCONS_00160033 . 5' 996 TCONS_00160032 TCONS_00160033 . 5' 996 EMBV3_22290 AGTAGACCTGCTCCTTCAACAACTCTAAAGTCTCTCTTGAATCACGTTCCTGTGACCAGG Gene GeneID:526200|LOC526200:XR_084538:6_cdna Constitutive 0 NULL GeneID:526200 9 PSEUDO LOC526200 NULL similar to Absent in melanoma 1 protein EMBV3_11162 TCAGCACAACCAACCTGTTCATTCTCAATCTGGGCGTGGCCGACCTGTGTTTCATCGTGT Gene GeneID:618629|GALR2:NM_001105010:41_cdna Constitutive 0 NULL GeneID:618629 19 GENE GALR2 NULL galanin receptor 2 EMBV3_32865 AATCTTTTCGCACTTGCTCTGCCCGCTCAAACAGTTGCAGGATGTCGATGACAGACTTGC Gene GeneID:538603|PVALB:NM_001076114:17_cdna Constitutive 0 NULL GeneID:538603 5 GENE PVALB pvalb1 parvalbumin EMBV3_42360 CTTGGAGTGATACAATTCCACACTGTGAAATTGTCAAATGTCAACGGCCATTTCTTGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39076 CTGGCCACCAGCTCCTATGTTTGTGGACTCTTACAATCTTCCGTCCATGTTGCCCTCACT Gene GeneID:505692|LOC505692:XM_002693779:59_cdna Constitutive 0 NULL GeneID:505692 15 GENE LOC505692 NULL similar to olfactory receptor 1487 EMBV3_37730 CCAGCGATCATGCTTGTGTCAGGGTGACTTTTGTACAGCCGTTGCCCATATGATGATGTG Gene BVT0102_421921 + 1 EMBV3_20619 GK000017.2:47352600-47582026 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075352 TCONS_00075350 TCONS_00075345 TCONS_00075348 TCONS_00075349 TCONS_00075353 TCONS_00075351 1 XLOC_046558 Coding TCONS_00075348 XLOC_046558 Coding Coding STX2 17:47313603-47354740 = TSS56843 3100 1 TCONS_00075348_2 287 10 0.924883313885648 0.000567920510747031 0.00129822632018758 0.000829650864815023 3.47780498287754e-05 0.000573869496969502 0.000188463573126243 0.000159356360401237 8.94570964411805e-05 0.00206353579253284 1.76690191429377e-30 1.57411470219332e-06 6.55870317873757e-06 0.000147225570855151 0.000647367149545437 0.000141695331894091 0.000158312202604891 1.04270238844714e-11 8.6568173275308e-33 0.00073961939280105 0.000226513682871803 0.000234699702097894 0.000242450602668057 0.000397563523709733 0.000384548424285065 0.000395409236278757 0.00131763394056694 0.00111862729485563 7.36940533273217e-05 1.75306146595469e-05 6.94311977661271e-30 XM_003583301.2 STX2 PREDICTED: Bos taurus syntaxin 2 (STX2), transcript variant X1, 0.0 5588 100.00 0.999032258064516 NM_001980.3 STX2 Homo sapiens syntaxin 2 (STX2), transcript variant 1, mRNA. 0.0 1415 84.09 0.41741935483871 TCONS_00075348_2 sp|P32856|STX2_HUMAN STX2_HUMAN Syntaxin-2; 0.0 526 88.85 0.996515679442509 2 coding 0 0 0 0 0.0786667891319416 0.485799217947598 -0.0614389274070805 0.368057398580515 CGCCGGCCGAGGGGAGGGCGACCGGCGGGCTGAGGCGGCGGCGGGGACATCGAGAGCCCGCGGCCAGCCGGAGGCGGCGCCGGGCAGGCCTGAGCGGCGGGGCGCGGCGCCCGGCCCGTGGGGATGCGGGACCGGCTGCCGGACCTGACGGCGTGTAGGAAAAATGATGATGGGGGCACAACTGTTGTTGTTGAAAAGGACCATTTTATGGATGATTTCTTCCATCAGGTCGAGGAGATCAGAAACAGTATAGCGAAAATAGCTCAGTATGTCGAAGAAGTGAAGAAAAACCACAGCATCATTCTTTCTGCACCAAACCCAGAAGGAAAAATAAAGGAAGAGCTTGAAGATCTGAACAAAGAAATCAAGAAAACTGCTAATAAAATAAGGACTAAGTTGAAGTCTATTGAACAGAGTTTTGATCAGGATGAGGGTGGAAACCGAACTTCTGTGGAGCTTCGGATACGAAGAACCCAGCATTCAGTGCTATCTCGAAAGTTTGTGGAAGTCATGACAGAATATAACGAAGCACAGACTCTGTTTCGGGAGCGAAGCAAAGGCCGTATACAGCGTCAGCTAGAAATAACTGGAAAAACTACCACCGATGATGAGCTGGAAGAGATGCTGGAAAGTGGGAATCCCTCCATCTTCACGTCAGATATTATATCAGATTCACAAATTACTAGACAGGCTCTCAATGAAATTGAGTCCCGTCATAAAGACATCATGAAGCTGGAGACAAGCATCCGTGAGCTACATGAGATGTTCATGGACATGGCCATGTTCGTCGAGACTCAGGGTGAAATGATCAACAACATAGAAAAAAATGTTATGAATGCCGCAGACTATGTAGAACATGCAAAAGAAGAAACGAAGAAAGCTATTAAATATCAAAGCAAAGCAAGAAGGAAAATGATGTTCATTATTATTTGTGTAGTTATTTTGCTTGTGATCCTTGGAATTATCCTAGCAACAACATTGTCATAGCAACCGTATCCCAAGAGCCATTTGTCCTTGGAGTCAGACCACATCTGCAGCAAATCAGCATCCTCCCATTTCATGAATGAATCCTAGACATTGTGACATGTGGCATTGAGTGCTGATATTTTATTAGTGAATTCAAGGAGAGAGCACAACAGAATGTATTGTTCAGTGGAAAAAACAGAATGGATGTGATGCGTTAACCCAGACATCCTTGGACTCTAAATAACACAGCACAAACATTTAACAATGTGAGACTTGTTTCAATGGCCTTAAAATAAGGAATCATTGAAATTTTCAATTTTTTTAATATATTTCAGTGTTAAAAATATGTATGTGAATTAGGAATATCTTATGTTATGAAGTTATTAGATTTCATGTCTGAGACTTTCTTCCCTCTCCCAGCTAACATGCTCATTAAGAGACATTTTTGTACTATGTTTCACTCATGTCTGTTTATGTTTGCAAAAATTATTTTTATTATCACAGAGCTGTTTTGTAAGATATCTATAAGTTTACATGTTTATAAATTAATTGTTTAATATATTAACATCTTAATTTACTCCGATTTTATGTATTAACTATTGCCTTTAAAAGAAGTAGGAAAGAAACGTCATGATGTCAGAGCCATCTTTGCACAGTTGTTTACACAGTTTGCCATCGGCATAGAAAACATTGGTTGCAAAGTACCCCAAAAAGCCTTTCTAGTTCCTTCTGTTGAAATTGATTTATAAGGTTCAAATCTGCCCAGTACCCTCCAGGAAAAGCTCGATTATTGTACTCAGCTTCCTCTCTACCTGTTCCATTACCCAAGATAATAAATTAGTTACTGCAATGTAAAGACAATGGTCTCTGCTTTCATTCTTTACAAAATAAGGTTTGTGTTTCCCTGTTCACACTAATAATGTCTGAATTTAAGGTGGTGATAAAATCAAATTTTAAACTCAAGGGGATCATTCCCAGACATTAAGTCATTCTTACATGTACAGATCACCTGAATGTTCTTGTTACATACCTACTATTCTGCTGAACTTTAAAAGTTAATTCTCAAAGTTTACAGGAATCCGTAATTAACATTTGTATTACTTCTTAATTTTTTAAAATTATAATGTGCTTTATATTTAGACTGTAAAATGTACGAAATCTTATTAGCAAATGGGCATCTATATGATAGCAAGTAGTCAAAACTTTAAATGAATATGTGAAGGATATTAAAAATATAGTTATCTCTTGTTATTTCTGTATGTGATTGTGTAAGCTCGTGACTGTAATTTAACATTGTCTGGCTTGAAAACTAATATATAGACACGCCTGATTGCAAGCTGTAAGTGTGAATTACAGAACCGTGTAGAAGCTGTGCTCCCTCTTGAATACAGTTACGAATTTCACGCGTTCATACTTTATACATCTGACTGCTTAGCTCAGAGTCAAGTCTGTATGTGTGCATTTTATTTTCTTGCTGGTCATTACTGTGCAGTCAGGATTCCTTTAGGAGTCTTCTGGCTCCAACATATATGTTTCTTAAATCTTTAGCCCATCAGTGAGACAGGCTCCCTTGTTGCTGCTTATGTTGATGGCATGACTTGTCCTGAGGGAATTTAACTATCCAGCGATCATGCTTGTGTCAGGGTGACTTTTGTACAGCCGTTGTCCATATGATGATGTGCACGCGTGGAGACACTTCATGCTCCCCACGTGTCCTGCTGTCGCTTCAAGTAAAGTCTTTTTAGCCCCCACTCCTCATAGCAATTCTTCTTGTATCTCTTCAAGACATTCTTCCTGGATTTGAAACACCTACTGAATCTGTGTTTTATATAGTTGAAGTTATGAAACCGCTTCTTGATTTCTACTTAAGGTGTTTAAGTTCACCAGGTAACCCATTTTGTATGTCTAAGCCTCATGTACCTATTTGACATCGGATTTTTAAAAATACATATACAGGTTCACTTGTTACTTTTTAAATCATTTCTTGAAATGTCATGTTTACATTAAAAAAACAAAACAAAACAAACTCAAGAGAACCCAAAAAAAATATTTTACTTTCTGCCTTGTTCATTTCTGGAAAGATTTGGGGGGAGATATTTTATTGCATATCCATAAATAAATTGTTAAAAGAATA EMBV3_10520 TCTGCTCCAGAGGAGAAAGGCTGGGCCAAGTTTGCCGACTTCCAGCCTTTCTGTTGCTCT Gene GeneID:510764|LOC510764:XM_002687984:77_cdna Constitutive 0 NULL GeneID:510764 5 GENE LOC510764 NULL similar to SAPS domain family member 2 EMBV3_36838 TTCAGACAGGCAGGGGCACGATGTGGAGCGGCTGGAGCACATGAGCGATGAGCTGAAGAA Gene GeneID:614600|LOC614600:XM_002695041:353_cdna Constitutive 0 NULL GeneID:614600 18 GENE LOC614600 NULL similar to rCG53826 EMBV3_03691 GAACTGAGGACAGAGAGGTTTCCAAAGGTATCCACAGTCCCCAGCAGAGTTAGTGGTTGG Gene GeneID:286872|MSX1:NM_174798:7_cdna Constitutive 0 NULL GeneID:286872 6 GENE MSX1 NULL msh homeobox 1 EMBV3_15424 GACCCCCAAATGCCACACGCCACCCCTCTATCGCATGAGAATTTTTGCGCCTAATCATGT Gene GeneID:404142|RPL18A:NM_001033619:14_cdna Constitutive 0 NULL GeneID:404142 7 GENE RPL18A MGC127693 ribosomal protein L18a EMBV3_07855 TTAGTCTACCCAACACTCCTCCCTTTCCTGGACCAACATACCTTCCCTCTGAAGCATTGC Gene BVV0102_086671 - 0 NULL GK000006.2:115716695-115802868 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08609 GCCATGCTGCCTGTGCAGAGCTGAATTCCCACCTTCTAAAGATTGATACTAAGGGAGAGC Gene GeneID:100296778|LOC100296778:XM_002687804:21_cdna Constitutive 0 NULL GeneID:100296778 5 GENE LOC100296778 NULL similar to NKG2-D EMBV3_00023 GGAGAAAGGGGTGGGCCATCACCATCATTAAACTGTTTGATCAATCAACGTTGGATAGTG Gene BVT0102_143868 - 0 NULL GK000005.2:111906408-112043300 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11395 CAGAGGTCTGTCCATCTTAGTTCAGTGTTTGTCAGTAGGTTCCTCAGAGTTCAGAGTTGC Gene GeneID:530641|CROCC:XM_002685798:687_cdna Constitutive 0 NULL GeneID:530641 2 GENE CROCC NULL ciliary rootlet coiled-coil, rootletin EMBV3_28221 ACTCCGCGATGACTTCCTTCACACCAAAGACCACAGTGTCCGGCAGGTTTCCATTCTGTT Gene GeneID:540664|TNC:NM_001078026:50_cdna Constitutive 0 NULL GeneID:540664 8 GENE TNC MGC140517 tenascin C EMBV3_24532 AGATGCCCTGCTCCACACTCTGATGGTATTCCGACTGTCCTTCTGCACAGAGCTGGAAAT Gene GeneID:786879|LOC786879:XM_002688765:82_cdna Constitutive 0 NULL GeneID:786879 7 GENE LOC786879 NULL similar to olfactory receptor MOR154-1 EMBV3_36296 CTTCTATTTGAGGACTCTCTCGGGTTTTCCCTGACCCTAACCAGCAGGAGCTGCTAGGCA Gene BVV0102_135495 + 0 NULL GK000011.2:99070590-99077977 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026155 TCONS_00026152 TCONS_00026162 TCONS_00026172 TCONS_00026151 TCONS_00026153 TCONS_00026175 TCONS_00026164 TCONS_00026154 TCONS_00026171 TCONS_00026176 TCONS_00026160 TCONS_00026163 TCONS_00026173 TCONS_00026161 TCONS_00026177 TCONS_00026158 TCONS_00026157 1 XLOC_014937 Coding TCONS_00026163 XLOC_014937 Coding Coding ODF2 11:99047355-99096019 j TSS18828 4221 1 TCONS_00026163_3 756 22 0.913712676982512 0.000120483699302582 0.000387344682913453 1.29660780057191e-12 1.47938866612484e-07 2.70103413120182e-242 0 2.83555218003702e-05 8.34546729835217e-23 9.9543049354298e-17 7.73339483644752e-16 0.000145860050750983 0.000111657898771286 3.43692103294002e-26 8.2988596575689e-98 2.89653069370108e-08 0.00263653730369925 4.71185324157407e-07 0.000760034574888357 0.000156573869251518 0.000179534492256219 0.000314953128964032 0.000640077372165522 0.000143665202707524 0.00149971600322517 0.000390700024015597 8.80362484854149e-07 3.59201200337446e-68 0.000244719184670286 0.000327780977253295 0.000392649181503944 XM_005213330.1 ODF2 PREDICTED: Bos taurus outer dense fiber of sperm tails 2 (ODF2), 0.0 7380 99.98 0.969912343046671 XM_005252029.1 ODF2 PREDICTED: Homo sapiens outer dense fiber of sperm tails 2 (ODF2), 0.0 3786 84.74 0.800047382136934 TCONS_00026163_3 sp|Q5BJF6|ODFP2_HUMAN ODFP2_HUMAN Outer dense fiber protein 2; 0.0 1405 93.98 0.997354497354497 0 coding 0 1 0 0 -0.00418140834706199 0.968552814032792 -0.0240429260029314 0.613823850752845 GACTGCATCCGCCGCGGCGTCTCCATGGCACGGCCCTGGCCTCCGACTTCAACGACTTCATAAGGCGGCGTTTCTGGGCGCAGCCGTGTCGCTCCTGGTTTCCATCGTGTGGAAAGAACGGAGTAACGAGTCTCACGCAGAAAAAGGTCTTGAGGACACCTTGCGGCGCACCCAGTGTTACCGTGACGAAATCTCATAAGCGCGGAATGAAAGGGGACACCGTGAATGTGCGGCGGAGTGTCCGGGTGAAAACCAAGAATCCACCTCACTGCCTGGAGATCACGCCACCATCTTCAGAAAAGCTGGTCTTTTGCACGCGGTTAAGTGACCTCTCTACAGAAGATGACGACTCCGGCCACTGTAAAATGAACCGTTACGATAAGAAGATTGACAGTTTAATGAACGCGGTCAAGATGCAGAAGGGAGAGCGCCAGATGGCCAAAAGGTTCCTGGAGGAGCGGAAGGAGGAGCTGGAGGAGGTGGCCCAAGAGCTGGCCGAGACCGAGCACGAGAACACGGTGCTGCGGCACAACATAGAGCGCATCAAGGAGGAGAAGGACTACACCATGCTGCAGAAAAAACACCTCCAGCAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGGAGGCTGAAATGGATGGGGCTGCTGCTGCCAAACAAGTCATGGCCCTGAAGGATACCATCGGGAAACTGAAATCGGAGAAACAGATGACCTGCTCGGACATCAACACCCTAACGAGGCAGAAAGAACTTCTCCTGCAGAAGCTGAGCACATTTGAAGAGACCAACCGCACTCTCCGAGACCTGCTGAGGGAACAACACTGCAAAGAGGATTCTGAAAGATTGATGGAGCAACAAGGGACACTGCTGAAACGGCTGGCAGAGGCGGACTCTGAGAAAGCGCGCCTGCTATTACTGCTGCAAGACAAAGACAAGGAGGTGGAAGATCTCCTCCAGGAAATACAATGTGAGAAGGCTCAAGCAAAGACAGCATCTGAGCTTTCCAAGTCCATGGAGACCATGCGGGGGCATTTGCAAGCACAGCTTCGGTGCAAAGAGGCAGAGAACAGTCGCCTGTGTATGCAGATCAAGAACCTGGAGCGCAGCGGGAACCAGCACAAGGCGGAAGTGGAGGCCATCATGGAGCAGCTGAAGGAACTGAAGCAGAAGGGAGAACGAGACAAAGAGTCCTTGAAGAAAGCCATCCGAGCCCAAAAAGAGAGAGCCGAGAAGAGCGAGGAGTATGCTGAGCAGCTGCACGTGCAACTTGCCGACAAGGATCTTTATGTTGCTGAAGCTTTATCCACTCTGGAGTCATGGAGGAGCCGCTATAACCAAGTTGTAAAAGACAAAGGAGACCTTGAGCTGGAAATTATTGTCCTGAACGACCGGGTGACAGATCTCGTAAACCAACAACAGACCTTGGAGGAGAAGATGCGGGAAGACCGGGACAGCCTGGTGGAGAGACTACATCGGCAGACCGCCGAGTATTCCGCGTTCAAACTAGAGAACGAGAGGCTGAAGGCTAGCTTCGCCCCAATGGAGGACAAGCTCAACCAGGCGCACATCGAGGTCCAGCAGCTGAAGGCATCAGTTAAGAACTATGAGGGAATGATTGACAACTATAAGAGTCAGGTGATGAAGACCAGACTGGAGGCTGATGAAGTGGCTGCCCAGCTGGAACGCTGTGACAAAGAGAACAAGATCCTTAAAGATGAGATGAACAAAGAGATTGAAGCGGCACGGAGGCAGTTCCAGTCCCAGCTGGCTGACCTGCAGCAGCTGCCCGATATCCTTAAGATCACAGAGGCTAAACTGGCTGAGTGCCAGGATCAGCTGCAGGGCTATGAGCGGAAGAACATTGACCTCACAGCCATCATATCAGACCTGCGCAGCCGGATCGAACACCAGGGGGACAAGCTGGAGATGGCGAGAGAGAAACATCAGGCTTCCCAGAAAGAAAATAAACAGCTGAGTCTGAAGGTGGATGAACTGGAGAGGAAACTGGAGGCGACCAGTGCCCAGAATATCGAGTTCCTACAGGTGATTGCCAAGAGGGAGGAGGCAATCCACCAGTCCCAGCTGCGACTGGAGGAGAAAACACGGGAATGCGGAACCTTGGCGAGGCAGTTGGAGAGCGCCATTGAAGACGCCAGGAGGCAGGTGGAACAAACCAAGGAGCACGCAGCCTCCAAGGAGCGAGCAGCCCAGAACAAGATCCTGGACCTTGAGACCCAGCTGAGCAGGACCAAGACTGAGCTCAGCCAGCTGCGGCGGAGCCGGGACGATGCTGATCGCCGCTACCAGAGCCGCCTGCAGGACCTGAAAGACCGCCTGGAGCAGTCGGAGAGCACCAGCCGCAGCATGCAGAACTACGTCCAGTTCCTCAAGTCGTCCTACGCCAACGTGTTTGGGGACGGTCCCTACGCTTCCTACCTGACCAGCTCTCCCATCCGCTCCCGGTCTCCTCCCACCTAAGCCGCTGCTCTTGGGTTAGGGGCTCAGATGGATGCCTTGGCAACGGAGGTGTCGCTAAGCCATATCTGGAAAGCCTGTTGGTTTTCCTCTCTCTCCCTGAGATGAAGTATGTTCAGGATCTTGTCTTAGCTACTAACTCCAGAAAAGTGCCTCGAGCAGCAGGGGATGGAGCCGAACCCACTTAGTTCTCTCCTCTCCGATAGCATCACCTGATGGAAAGTTCTAATTACCCTAACAGGCCTTAAAGCTACTACTATTAGGGTCAGGTTTTAACTCACTGTGATTGGCTCATTCGTTTCTCAGGAGAATATTTGGCCTGGACTTTCCCTCCAGACCGTTTTCCAGCTCTCTTCTATTTGAGGACTCTCTCGGGTTTTCCCTGACCCTAACCAGCAGGAGCTGCTAGGCAGAGGTCCGCACTGCGCCTCACCTTCTCGTGCTGCTTTCCTCATTGCATGGGTACGGTGTCCTCTCCAAGGTGCTCCCCTCCCACTTGTGGCCAAGTTTCCTCAAGGCCACTTGCCCTCACGCACTTCCCTACAGACCCTCGAGGGTTTATGTTTTACAAGTTCGCCTTGTAAAAGTACAATCCCAGTCTCATTGATTTTTTTCTTAGCTAGGTTTGTGTCTGTGGAATGCATTTATTCTTGAAATGTATATGTTTTACAAAAGCTTTTATAATCAATATTTAAGTTTCCACGGGATAGTCTCCTTTACCCACACGATCCCTCTTCTAAAAATGATTCAGTAAGACGCTGCAGAAGAGCCAGTAAACGTTTTTTCAGGACGTGGCACATGGAACATTAGGCTCTTTGATTCTGACTGGGTCGGTGCTTTCTCCTCTGCATGCTTTTGCTTTATGATCCTGTGAAAGGTCCGGAGGAGATACATGGCAAGGTGCTGCTCAGTGTGTGAGGGCAGATGGCTTTAGCTCTTAGGAGGAAGATGGGCTGTGTCTGTCTTGCTATTTTTTAAATGTTAATTGCTTTCTGAAAGATGATGGGCTATTTTTGTCCTCCTCACATGTTCCTGTATTTAAAAGAACAACATATTCAGAGAGAAGAGAACACACTTGGTGTTCTGTGCTGAATCCTAACCTTTCCATTCTAGATGGTATTGTCCTCTGGGTGATCAAGTCTTGTTCCCTCTCAGCCACTGTAACCCAGGTCCGAACCTCTGGAGAATCCCCGTGTCCCCAAAAGCAATGGTCCCACACAGGCATCTGGATTGCACTCCCAGAACCGCACCCCCCCACCCTGCCCCAGTTTTGGAGACATTTGTAGTTTACAGCTTTCAATGATTTGTTTTTGTTAGTTTTGTTCTTAAATTTTATCTTCAGCTTTTAATTTTGCCAAGGAAGGTCCCTGAAATTACTACTACCAGCTACCATTGCCATAAAACCAAGCCTATTTTCACATCATTAACATAGACTTGAATTTTCATACAATGTATGAAAGATCTTCCTAAGAAAAGACAGTTGACAAACTTACACCAATGTGCATACACTTCTGTATAACTCATCATTATTATCATCAAGCTGATGATAGCCCTTCAGTGTAGGATTCTGCTATCTGCGATGATGCTGTGGGGAATTCTCTTTGGTTTCGTGGCTGGGATTCTCCTAACAATGTTTGGTTTTTCTTTGTAAAATATTGTATTACAAAAAGTCCAGAGATTTTGTGAAAATGAAAAATGTTTATATTGCTTCAAACTCGAGAAAAAATAATAAACTCGAGCCTGGTGC EMBV3_17807 CAACTGAGGTTCCTATTTTTATGGTACATTTTTCTGAGGAATAGTGGCTAATTTAGAGCG Gene GeneID:513632|RCBTB2:XM_002691783:390_cdna Constitutive 1 NULL GeneID:513632 12 GENE RCBTB2 NULL regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 EMBV3_23644 GCACAGTTGTATGGCTTCCTTGACCTCTACAAAGTCAATGCTTCTGCTCAGCCAGCTTCA Gene BVV0101_025807 - 1 EMBV3_12934 GK000010.2:59282940-59305356 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017423 TCONS_00017424 TCONS_00017425 1 XLOC_009030 Coding TCONS_00017423 XLOC_009030 NonCoding Coding LOC503858 10:59291481-59418619 x TSS11907 1284 1 TCONS_00017423_1 67 0.107476635514019 4 0.989932120468471 0.000156555564427825 0.000381522741697126 0.000418955680011821 1.15318019632068e-07 9.9491789864661e-08 1.54246233668677e-05 2.87017270222335e-05 0.000969616267784862 5.73001683816233e-07 3.50999098515518e-118 2.80006072004751e-72 2.17169238132182e-148 7.08603442880712e-71 1.1310017086069e-228 3.46869160719749e-94 3.59090667397357e-43 1.68288813675073e-253 0 6.91771854133794e-10 1.30499218228186e-08 2.72023656531576e-89 3.12235822860213e-120 8.20020719443973e-05 3.69514551535559e-12 2.91703695347569e-09 0.00020941383597324 5.89686165299717e-07 4.45114386904897e-43 6.26746767933184e-264 0 NM_174305.1 CYP19A1 Bos taurus cytochrome P450, family 19, subfamily A, polypeptide 1 (CYP19A1), mRNA. 5e-25 120 98.55 0.0529595015576324 0 noncoding 0 0 0 0 0.0180627183020175 0.909853801711607 0.0249030932950045 0.734349157576635 GTCCCTGAACAGGCTGCAAAGCTGAGGTGTCGGCATAGCTATGCCGCGCTAGGAACTCTTGTCTGGAGTTCCCGGTGGTGTACCTCCATCCTCGGTACCCTAGGAGCAAGACAAACCAGACTAAACACAAAGGACCAAAAAAGGTCAAGTGTGCTGGCCCATCTGCAGCTCCCTTGATGTGTGCTGAGCACTGCAGTGTTCTAACACACCTGTTCACTACCTCCTTATACCCATCCTGGTTCATGGAGGTGTGTGAACATCGGGACCGAGGCCATCTGACAATCACAGGGGGACCTGAGATCAGCTCAGCAACCAGTGACCCCAGGAACTTCTCCCTTCAGGTAACTGGTCTGGTGTCTGGTTTGGATCTAGTCAGATGAACCGTGTCTCCTGCCTAGCTGACAACCCACAGGAGGTTTCTATACACAGTAGGGACAAAGCCTTGCAATAGCGGTTACTTGATGAACCAGCTGGAGACAGACAGAGAAAGTTGTTGAAGCTGGCTGAGCAGAAGCATTGACTTTGTAGAGGTCAAGGAAGCCATACAACTGTGCTGATTTTATATTTCTTGAAAAATTAAGAGTTATCATATCTCCCTCCCCGTGAGGTCGTTTGAAGAACGGATAAGAAGAGGACAAAATACTGGTCTTTTGCCTTTGTGTGGAGCCCTAGATTCATTTCCTACTTAGTGTGTTGGTGATTGATGTTGAAAGAAATAACATGCTCTTCCATTAGTGATATAAACTTATGGAATGTATAAACTCTTGAAGTACTTATAAACACTTAACTATATAGAAGCTGCAATTGCTTCTCACTTACAACAGTGAGAAGCAGATAAAATATTCCCCAAATAAATGTTATCGTGAAAGTAATATATTTCTGGATTAAGTTAGGGAGACTTTACATCTTTTCACACAGATGTATCAGTATCAAAGTCTTTTCAAATCCATAGAAGTTCAAACATATCAGACCTTTCCACTGCTCAAGACTTTTTTGGTATCCTCTTTGGTGTGGCTTAACATAGCATTCTAAACATGTTTTTGATGTGTATCTGTTTATATGATTAAACTCACATTTTTATGCATATAACCTGAATCTAAGTTCACATGAAAAAGAAGCATATTCTTAGAAAAATTATAATGAAAAGATACTGGTCAGACCAAATATTAAAATATTATAAATCTATGATAATTAAAACATGACTATATCACTAATATAGACTAAAAAGCAAGGCAAATATATGCTGGAATTTATTACATTATAAAAGTTGTATCAGGTAGGGAA TCONS_00014231 TCONS_00014232 r 3' 8543 TCONS_00014233 TCONS_00014235 r 3' 1624 EMBV3_27491 CCTGGGGGATCTCCGGGGAAGAGTGGCCAGATCTCTCAGCTTTTAAACAGAGTGGACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06620 CGCGGGGGGCTGGAGAAGGCCTGGATAAAGACTGATGACAGCCAGTGCGCCACCCCAGCC Gene GeneID:538275|SHB:XM_002689735:100_cdna Constitutive 0 NULL GeneID:538275 8 GENE SHB NULL Src homology 2 domain containing adaptor protein B EMBV3_00391 GGGTAGAATGAAATTAGTCTAAACAATTCAGAGAAGTTGGCACAGGCTGTGGCCCTAGTC Gene BVT0102_075287 + 0 NULL GK000010.2:74497703-74519013 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32628 CAAATGTTACATACCTCAAGTACAAACAGCACAGAAAATGCATATGGTCTCAACCGAATG Gene BVV0101_026229 - 1 EMBV3_20823 GK000011.2:3056125-3081933 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026674 TCONS_00026673 TCONS_00026670 TCONS_00026677 TCONS_00026671 TCONS_00026676 TCONS_00026675 TCONS_00026669 TCONS_00026672 1 XLOC_015092 Coding TCONS_00026677 XLOC_015092 Coding Coding TMEM131 11:3081424-3265589 = TSS19092 6396 1 TCONS_00026677_5 1876 41 0.965492713016659 0.000899419322749775 0.000163608450276225 0.000421041300080227 0.000616984961679622 7.78486370841898e-13 0.000303425711918653 0.000294416047395073 0.000792557875553227 0.000573348514041712 0.000312968121740291 5.61913078149755e-05 8.83293016058151e-05 0.000192278766885807 0.000184734825214303 9.25671271742456e-05 0.00228478190618111 3.61270228187894e-09 0.000839032600947601 0.000889634195973261 0.0014397460681655 0.000767875925546224 0.000665274475576654 5.59214068288457e-06 0.000788171826314703 2.53645944980051e-43 0.00181454417947186 7.08060087400348e-10 0.000141144430048894 0.000153507760708047 0.000214319808838865 XM_613474.7 TMEM131 PREDICTED: Bos taurus transmembrane protein 131 (TMEM131), 0.0 1.152e+04 100.00 0.998905565978737 NM_015348.1 TMEM131 Homo sapiens transmembrane protein 131 (TMEM131), mRNA. 0.0 8331 88.85 0.998905565978737 TCONS_00026677_5 sp|Q92545|TM131_HUMAN TM131_HUMAN Transmembrane protein 131; 0.0 3350 91.66 0.999466950959488 1 coding 1 0 0 0 -0.186762623390143 0.286126468840392 0.00411138110058729 0.928842313124831 ATGGGGAAGCGGGCCGGAGGAGGAGCAGCGGGATCCGCCGCCGCTGCCTCCACGTCCGCCGTGGCCGGTCTGGAGCCCGCGGCCGGCCGCGGCGGGGGCCCGCGGAGCGCAGCCGCCGGCCTCCTGGGAGCGCTGCACCTGGTGATGACCCTCGTCGTGGCCGCGGCGCGGGCCGAGAAGGAAGCATTTATTCAGTCGGAGAGCATAATAGAAGTGCTGCGTTTTGATGATGGAGGGCTTCTACAGACTGAGACAACACTTGGACTCAGTTCATACCAACAGAAAAGTATATCTTTGTACCGGGGTAATTGCAGACCTATACGGTTTGAGCCACCAATGCTGGATTTCCATGAACAACCAGTTGGAATGCCAAAAATGGAAAAAGTTTACTTACATAATCCTAGTTCTGAAGAAACTATTACTTTAGTATCAATATCTGCTACCACATCACATTTTCACGCATCATTTTTTCAAAATAGGAAAATTCTTCCAGGAGGAAATACATCATTTGATGTAGTTTTTCTTGCAAGAGTAGTGGGAAATGTAGAAAATACTTTATTTATTAATACATCTAATCATGGGGTATTCACTTACCAGGTATTTGGTGTTGGAGTTCCAAATCCATACCGATTGAGGCCATTCCTTGGGGCCAGAGTCCCTGTGAATAGCAGTTTCTCACCCATAATAAACATACACAATCCTCACAGCGAGCCTTTACAGGTTGTAGAAATGTACTCTAGTGGAGGAGACCTTCACCTTGAACTTCCCACAGGGCAGCAGGGAGGCACCAGGAAGCTGTGGGAAATTCCTCCTTATGAAACCAAGGGAGTGATGAGAGCCAGTTTTTCATCTAGAGAAGCAGATAATCACACAGCTTTCATAAGAATAAAGACAAATGCTTCAGACAGCACGGAGTTTATCATCCTTCCGGTTGAAGTGGAAGTCACAACAGCTCCTGGAATTTATTCCTCAACTGAAATGTTAGATTTTGGCACACTGCGAACACAAGATCTACCAAAAGTTTTAAATCTTCATTTATTAAATTCAGGAACAAAAGATGTACCAATAACAAGTGTTCGACCTACACCACAAAATGATGCTGTCACTGTACACTTTAAACCAATTACATTAAAAGCTTCAGAAAGTAAATATACCAAGGTAGCAAGTATTAGTTTTGATGCATCAAAGGCGAAAAAACCATCTCAGTTTTCTGGGAAAATAACTGTGAAAGCAAAGGAAAAGAGTTATTCTAAACTTGAAATACCATATCAAGCAGAGGTTTTAGATGGTTATTTGGGATTTGATCACGCTGCAACATTATTTCACATTCGAGACAGTCCTGCTGATCCTGTGGAAAGGCCAATTTACCTTACTAACACTTTCAGCTTTGCGATCCTCATTCATGATGTGTTGCTACCAGAAGAAGCCAAAACAATGTTTAAAGTTCACAACTTCAGCAAACCAGTCTTAATTCTACCAAATGGATCAGGCTACATTTTTACTCTATTTTTTATGCCATCCACATCGTCCATGCACATAGATAACAATATTTTACTTATTACCAATGCCTCTAAGTTTCACTTACCTGTGCGGGTATATACAGGCTTTTTAGATTACTTTGTATTACCCCCCAAAATAGAAGAACGTTTCATAGATTTTGGTATACTGAGTGCAACAGAAGCAAGTAATATTTTATTTGCCATTATAAACAGCAATCCAATTGAGTTGGCTATAAAAAGCTGGCATATTATAGGAGATGGTTTATCAATAGAACTCGTAGCTACTGAAAGAGGCAATAGAACTACAATCATCTCAAGCCTTCCAGAGTTTGAAAAATCCTCTCTATCAGACCAGTCATCGGTAATACTAGCTTCAGGATACTTTGCAGTGTTCAGAGTCAAACTTACTGCAAAAAAACTGGAAGGAATTCATGATGGGGCTATACAGATCACGACAGACTATGAGATCCTAACAATTCCTGTGAAGGCTGTGATCGCAGTGGGTTCTTTGACTTGCTTCCCAAAGCACATGGTTCTTCCACCTTCCTTTCCAGGGAAAATAGTTCATCAGAGTTTAAATATTATGAATTCCTTCTCACAGAAGGTAAAGATCCAACAGATACGATCTTTGTCAGAAGACGTGCGTTTTTACTACAAACGATTGCGGGGTAATAAGGAAGACTTGGAGCCAGGGAAAAAATCAAAGATTGCAAACATTTACTTTGATCCTGGATTGCAGTGCGGGGATCATTGCTATGTCGGCTTGCCTTTTCTGTCCAAATCTGAACCCAGAGTCCAGCCTGGCATAGCCATGCAGGAAGATGCCTGGGACACCGACTGGGATTTGCATCAAAGCCTATTCAAGGGATGGATGGGAATAAAGGAAAACTCAGGTCACAAATTGAGCGCTATGTTTGAAGTGAATACAGACCTTCAGAAAAACATCCTGTCAAAAGTTTCTGCCGAGCTCTCCTGGCCATCCCTCCTCAGCTCCCCCCGGCTCGTGAGGTTTCCCCTCACTAATACAAACTGCTCTTCAGAAGAAGAGATTATGTTAGAAAACCCTGCAGATGTTCCCATCTATATTCAATTTATCCCCCTGGCTTTATATTCCAGCCCTTCCATCTTTGTAGATAAGTTAATATCAAGGTTTAACTTAAGTAAGGTGGCAAAGATCGATTTAAGAACACAAGAATTCCAAGTCTTTAGAAACACTGCTCACCCACTGCAGAGTTCAACAGGATTCACAGAGGGCCTCTCCCGACATTTAGTTTTAAACTTAATTTTAAAACCTGGAGAAAAGAAATCTGTCAAAGTAAAGTTTACTCCAGTTCACAATAGAACTGTTTCTTCCCTAATCATAATCAGAAATAACCTGACTGTGATGGATGCCGTAATGGTCCAAGGACAGGGGACAACCGAGAACCTGAGGGTGGCAGGCAAGCTTCCGGGCCCAGGGAGCTCCTTACGCTTCAAAATCACAGAAGCACTGCTGAAAGACTGTACGGAGGGTATGAGACTAAGGGAACCCAATTTCACATTGAAAAGAACATTTAAAGTAGAGAACACAGGACAACTTCCAATTCACATAGAAACCATTGAAGTCAGTGGGTACTCTTGTGAGGGATATGGCTTTAAAGTCGTCAATTGTCAAGAGTTTGCACTGAGCGCCAATGCCTCTAAAGACATAGTCATTCTGTTTACTCCTGATTTCACGGCTTCTAGAGTCATCCGTGAACTGAAGTTTATAACAGCCAGTGGCTCTGAGTTTGTGTTTGTATTGAATGCATCCCTTCCTTACCATATGTTAGCAACCTGTGCAGAAGCCCTGCCCAGGCCCAACTGGGAGCTGGCTCTGTACATCATCATCTCAGGAATAATGAGTGCGCTGTTTCTCTTGGTAATTGGAACAGCCTATTTAGAAGCTCAAGGAATTTGGGAGCCCTTCCGAAGGCGGCTGTCCTTTGAGGCCTCGAACCCGCCCTTTGATGTGGGGAGACCATTTGATCTCAGGAGAATCGTTGGTATTTCATCTGAAGGAAACTTGAACACACTCAGCTGTGACCCCGGTCACAGTCGGGGCTTCTGTGGAGCAGGTGGCTCGGCCTCCCGGCCCGGCGCAGGGAGTCACAAGCAGTGTAGCCCGTCGGTCCACCCGCACAGCAGTCACAGCAATAGAAACTCGGCTGACGTGGAAAACGTCAGAGCCAAAAACAGTGCGAGTGCCTCTGGCAGGACTAATGCCCAGTCGGCGAGCAAAGCCAGCCCACTGGTCTTCGAGTCCCACAGCATGGCCCAGGGTCACACCGCAGGCCGGAAGTCCAAGGGGGCCAGACAGGGCCAGCACAGCAGCCAGCACCATGGCCACAGCCCCCTGGAACAGCACTCGCCCCCGCCGCCGCCGCCAGTGCCTCAGCAGCAGGAGCCACAGCCCGAGAGGCTGTCCCCTGCGCCCCTCGCACCCCCGCCCCACCCAGAGCACCCCGGCAGCACCCGGCACAGCTCCGAGGACTCAGACATCACCAGTCTCATCGAAGCCATGGACAAAGACTTCGAGCACCACGACGCCCCGCCCCTAGATGTGTTTACAGAGCAGCCGCCTTCACCCTTGTCGAAAAGCAAAGGGAAAGGAAAGCCTCCTCAGCGCAAGGTGAAGCCCCCCAAGAAGCAGGAGGAGAAGGAGAAGAAGGGAAAGGGGAGGGCCCTGGAAGACGAGCTGAAGGACTCCTTGGCTGACGACGACAGCTCCTCCACCACCACAGAGACCTCCAACCCAGACACAGAGCCTCTCCTCAAGGAGGATACAGAAAAGCAAAAGGGAAAACAAGCCATGCCTGAAAAACATGAAAACGAAATGTCTCAAGTGAAACAAAAAAGCAAAAAAGTCTTAAATGTTAAGAAAGAAATCCCAGCAGATGTGAAACCCAGTTGCTTAGAGCTACCGTATACTGCCCCCTTGGAAAGCAAACAGCGCCGAAATCTCCCAACCAAGATTCCTCTTCCAACTACACTGACCAGTGGATCCAAACCACGAAACTCCCAGAAAACAAAAGGTACAAGTAAGTTAGTGGATAGCAGGCCACCTGCCCTCGCAAAGTTTCTCCCAAACAGTCAAGAACTAGGCAACACCAGCAGCTCAGAAGGTGAAAAAGACTCTCCACCACCAGAGTGGGATTCCGTGCCTGTTCACAAGCCCGGCAGCTCTACAGATAGTCTTTATAAACTCTCTCTGCAAACCCTCAACGCAGACATCTTCCTGAAACAACGCCAGACCTCGCCGCCGCCCACCTCCCCCTCACCGCCCGCCGCACCCTGCCCGTTCACGTCCCGGGGCAGCTACAGCAGCATCGTCCATGGCAGCCCGGGCAGCGACTCTAAAGCAAAGCAGCCAAGCGGGAGCAAACACAAACTGACAAAAGCCGCTTCTCTCCCGGGCAAGAATGGCAACCCCACTTTCGCTGCGGTCACGGCTGGGTATGACAAGAGCCCAGGTGGGAACGGCTTTGCCAAAGTTTCTTCAAGCAAAACAGATTTCTCTAGCAGCCTTGGCATTTCACACACTCCTGTTGACAGCGATGGCTCAGACAGCTCGGGTCTGTGGAGCCCCGTGAGCAACCCCAGCAGCCCTGACTTCACACCCCTCAACTCGTTCTCAGCCTTTGGGAATTCTTTTAACCTAACTGGTGAAGTGTTCAGCAAGCTCGGGTTATCGCGATCATGCAATCAGCCCTCACAGAGGAGCTGGAATGAGCTGAGCAGCGGCCCCTCCTACCTCTGGGACTCGCCGGCCACAGAGCCCAGCCCTTCCTGGCCAGCCAGTTCCAGCTCCCCGACCCACACGGCCACACCCATCCTTGGCAGCACCAGCAGCCTGTGGTCGTCCACTCCGTTCAGCAGCTCCATCTGGTCCAGCAGCCTGCACAGCACCCTGCCCTTCACCAGCCCCACCAGCGCGTTGCCGAGCATCAGCCTCATGGGCCCCGAGAGCGCCCCGGCAGCTCACGCGCCCTCTGCCGCCAGCCCCTCCGACGACCTGGGCCAGACCTACAACCCCTGGCGGATATGGAGTCCCACCATCGGACGGAGGAGCTCAGACCCCTGGTCGAATTCGCACTTCCCTCACGAGAATTGAAATTAGGCAAAAAAAGAAATAAAACGGTGGTGGCCCCTGGTCTAGACCGTGACGTGCCCGTTTCCGAGACATCTTGAAGGCTCTCCCCGCTGTTGCTGCCCACTCCTCACCCTCCTCATCTCTGCAGGGCAGGCTTACACCACTCGCTTCTTTCAGATCTTTCTTGCAATTATGATAATACGAGATTTGCTGTTGTGCTTTTAGAGAAAAGTCTGGACTCAGCCACAAACTCCAGTAAGACCTGTACATCTGAAAACCTTACCTGTTATCAGCTGCCCACCACCTGTCTTCTCCCACCTTATCTGTCTGTGTGAACACCAATTTGATATTACAGCAAGGTGACAACTCAAGTTGATTTCAGAAGTCCTGGCATGTGACAATTTTATTAAATTACCAAGGTTGGTTTTTTAATAATTTCACAATATTATACGCCAAGATCTAATTTTAAAAATGTATGAGGACTTTGTGCTGAAAATACAGAGTATTTTTTTAAAATAAGGCTGTCTCGGTTTAAAAGCAGATTACAGAAATGTTAAGTCAACTTTAAGAACAGTGAATGAATGTTAAAACATTCGGTTGAGACCATATGCATTTTCTGTGCTGTTTGTACTTGAGGTATGTAACATTTGTATACCTGAATTTATTTTCAAGATAAACTGAAATGCACATCGCCAAGTCTTGAGATACAAGATTGAAGGTGTATTTCTTAAAAATACAACTTTATGTTGTACTTTGAAATAAATGATGCTTTTTTCAAAAGCCTTG EMBV3_27904 CCAGTTTTTGGATACTAATGACAGCCTTGTTTATCCCCTTTGAATCAGCAGACACCATGG Gene GeneID:614346|TBL1XR1:XM_002684906:40_cdna Constitutive 0 NULL GeneID:614346 1 GENE TBL1XR1 NULL transducin (beta)-like 1 X-linked receptor 1 EMBV3_33338 GACTTTTCCGACATGGTGGAGATATTGATCTGAAGGAGGTGGTGCCGTGGGGACTCTGAA Gene GeneID:538514|AMOTL2:XM_002685085:7_cdna Constitutive 0 NULL GeneID:538514 1 GENE AMOTL2 NULL angiomotin like 2 EMBV3_26451 TACAATTTTATAGATAACGTCTCTCTGGGGCTGCGATTGCCCCCTTCTGGCTCTGGCTGC Gene BVT0102_195898 - 0 NULL GK000015.2:10833032-12172022 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210234 TCONS_00115686 TCONS_00206812 TCONS_00224113 TCONS_00066283 TCONS_00231338 TCONS_00152736 TCONS_00116100 TCONS_00250720 TCONS_00071860 TCONS_00230121 TCONS_00038381 TCONS_00220662 TCONS_00153678 TCONS_00023373 TCONS_00207069 TCONS_00175855 TCONS_00009884 TCONS_00252107 TCONS_00218945 TCONS_00148280 TCONS_00175580 TCONS_00008224 TCONS_00021569 TCONS_00249011 TCONS_00244654 TCONS_00107179 TCONS_00239419 TCONS_00131137 TCONS_00169199 TCONS_00189891 TCONS_00039951 TCONS_00189806 TCONS_00155779 TCONS_00229819 TCONS_00063181 TCONS_00009259 TCONS_00062744 TCONS_00111497 TCONS_00109027 TCONS_00209636 TCONS_00155780 TCONS_00000305 TCONS_00251707 TCONS_00130084 TCONS_00037818 TCONS_00064462 TCONS_00039226 TCONS_00178325 TCONS_00233372 TCONS_00161667 TCONS_00244651 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00039904 TCONS_00085967 TCONS_00110323 TCONS_00199802 TCONS_00250246 TCONS_00020756 TCONS_00238327 TCONS_00040179 TCONS_00249772 TCONS_00010471 TCONS_00088088 TCONS_00199424 TCONS_00064619 TCONS_00200529 TCONS_00056820 TCONS_00244653 TCONS_00155778 TCONS_00059708 TCONS_00071033 TCONS_00161835 TCONS_00115148 TCONS_00198813 TCONS_00170823 TCONS_00116665 TCONS_00249569 TCONS_00142649 TCONS_00122313 TCONS_00251907 TCONS_00122479 TCONS_00007359 TCONS_00166449 TCONS_00031910 TCONS_00152645 TCONS_00251929 88 XLOC_128744 XLOC_069855 XLOC_125332 XLOC_137409 XLOC_040997 XLOC_140827 XLOC_092501 XLOC_070269 XLOC_153663 XLOC_043630 XLOC_139613 XLOC_022206 XLOC_133979 XLOC_093441 XLOC_014040 XLOC_125588 XLOC_105634 XLOC_005437 XLOC_155048 XLOC_132264 XLOC_090162 XLOC_105361 XLOC_003782 XLOC_012242 XLOC_151954 XLOC_150512 XLOC_063090 XLOC_146085 XLOC_079842 XLOC_103305 XLOC_115928 XLOC_023768 XLOC_115843 XLOC_094822 XLOC_139313 XLOC_037908 XLOC_004815 XLOC_037471 XLOC_067397 XLOC_064932 XLOC_128147 XLOC_000084 XLOC_154648 XLOC_078795 XLOC_021647 XLOC_039186 XLOC_023044 XLOC_108098 XLOC_142854 XLOC_098554 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_023721 XLOC_052005 XLOC_066227 XLOC_121454 XLOC_153189 XLOC_011431 XLOC_144994 XLOC_023996 XLOC_152715 XLOC_006022 XLOC_052875 XLOC_121077 XLOC_039343 XLOC_122181 XLOC_034623 XLOC_036490 XLOC_042806 XLOC_098720 XLOC_069449 XLOC_120466 XLOC_103665 XLOC_070831 XLOC_152512 XLOC_087074 XLOC_073868 XLOC_154848 XLOC_074034 XLOC_002920 XLOC_101287 XLOC_018155 XLOC_092410 XLOC_154870 Coding TCONS_00209032 XLOC_127543 NonCoding NonCoding - 6:64152219-64153072 - TSS156539 853 5 TCONS_00209032_3 52 0.998827667057444 1 0 0.000107999636877353 1.19149476583088e-05 2.77977361639031e-05 7.42310905705153e-05 7.42958473863742e-05 8.29962906229326e-06 8.28814847992459e-06 2.14954933166912e-05 3.66837127035834e-05 3.34088975402152e-05 9.6624329663661e-06 5.30274005361289e-05 1.35671438855644e-05 9.77799863791822e-05 5.64380255512048e-05 0.000967589294690976 0.000241963569057791 0.00217517217184346 2.34687726319461e-05 2.10768795184397e-06 7.7643663881918e-06 0.00243679562207728 0.000415699164541666 0.000345529510950997 1.33440787334988e-05 7.22718768678785e-06 1.20285354067589e-05 0.000120696340149773 7.33536840209947e-05 0.000127428579407952 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-29 134 83.87 0.144196951934349 0 noncoding 1 1 1 1 -0.0633622171091176 0.579861142912628 -0.0149585236604085 0.812391044970016 CGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTTGGTGAGCGCCAATGCTGCGACTTACCGCCTCGCTGCCACTCGGTTTTCTGGTTGTAACACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCCGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGCGATTGCCCCCTTCCGGCTCTGGCTGCCTGTCACCGGAGGGGGAAGGTCTGCAGCCGGCTATCTCTGTTCAGTCCTTTGTTCCGTGCGCGGGCCTGACGGTTTTAGGTTAGGACTGGCTTTTCGCGTGGTAGATATCCCACAGTCTGGTTTGCTAACCCAAATTATTTCGCTCAGATAGCGCTCAGGGTATTCAGGTCAGATTCTTACTCTCAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCTGCTTGCTAATGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGAAATCTGCGAGTTTTAATTGTTTATTTATTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTCGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGATTCCCTTCCCGGGACGGAGCTCCGTCCCTCCCTCTTTTGTCTCT TCONS_00205327 . 3' 333887 TCONS_00205327 . 3' 334739 EMBV3_06807 GGGAACCCATGAGGAGAAGAAGGAAGACTGGAATAACGTCACTAAAGCTGAGTCGATGGG Gene GeneID:537813|KCNH5:XM_002691056:472_cdna Constitutive 0 NULL GeneID:537813 10 GENE KCNH5 NULL potassium voltage-gated channel, subfamily H (eag-related), member 5 EMBV3_28907 GGCAGAAGTCTGTTCCTGGTTGTTGTATCTGGCAGTGGGGGTGATTAGGGAGGGTGAATA Gene BVT0102_352225 + 0 NULL GK000028.2:3865975-3962518 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13146 TTTTGGCTACGCTGGGTCTTCATTGCTGCATGGGCTTTTCTCCAGTTGCTGTGAGCCAGG Gene BVT0102_339926 + 0 NULL GK000001.2:2216523-2258668 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26808 CGTTGTCTGCTGAGGACCCCTCCTCCTTGGGACAGTGCCTACCACCTAGAAACTGTTTTA Gene GeneID:506146|UNC13D:XM_002696175:151_cdna Constitutive 2 NULL GeneID:506146 19 GENE UNC13D NULL unc-13 homolog D (C. elegans) EMBV3_08042 AGGGCAGCCTCTGACCACTTGTCCACTCAGGTGTCCTCCCTGCAGTGTTTTAATTTTACT Gene GeneID:616861|SHISA5:NM_001035486:316_cdna Constitutive 0 NULL GeneID:616861 22 GENE SHISA5 MGC127402 SCOTIN shisa homolog 5 (Xenopus laevis) EMBV3_26938 CAGCTGCGGAATGCAACTACCGTGAACAATGTCCGACTCAGCAAAAGTTTGACGAACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27259 AGCAAGGTAGCAGAGTGGTCCTTCTCTTTGCCTCAGCTTCTAAGACATTTGGGGGCAGAA Gene BVV0102_111824 - 0 NULL GK000016.2:70749809-70760232 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068148 TCONS_00068152 TCONS_00068144 TCONS_00068147 TCONS_00068143 TCONS_00068145 TCONS_00068155 TCONS_00068151 TCONS_00068156 TCONS_00068150 TCONS_00070077 TCONS_00068149 TCONS_00068153 TCONS_00070076 TCONS_00068146 2 XLOC_041597 XLOC_042127 Coding TCONS_00070076 XLOC_042127 NonCoding Coding PTPN14 16:70749727-70756677 x TSS52119 6652 3 TCONS_00070076_1 93 0.0333734215273602 2 0.0430277737804 0.00100636911942116 0.00121316868697718 0.000774332941926809 0.00138994776137326 0.00158575318270613 0.000548846902517072 0.00122853007459882 0.00134164562220555 0.000661299456769822 5.55185534358366e-36 0.000152851900278501 0 0.000136886797507515 0.00046640311384405 5.02194216436272e-05 0.00383217813743722 0.00347264026502494 0.00140796246372284 0.00193907116346418 0.00152364930444806 0.00111007782554264 0.00155362227184298 0.000832829747756983 0.00173415421488097 0.00193377400715624 0.00171402624887175 0.00128391623738838 0.000247082810893111 5.284171159267e-05 0.000119231227193879 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 5e-59 235 86.57 0.0300661455201443 NM_005401.4 PTPN14 Homo sapiens protein tyrosine phosphatase, non-receptor type 14 (PTPN14), mRNA. 0.0 1229 75.54 0.273150932050511 0 noncoding 0 1 1 1 0.0204331589573593 0.850137770748439 -0.0500802332811878 0.354394616866766 AAAAAAAAAAAAGTTTATTGCATTTGGAAGTCAATAGATATCTTTTACAAAAAAGGTTAGAATAAAGATCTCACATTTGTAAAGGCACATATGAAACATTTAACAGCAATGACAAGGGCAGTGAGAACATAAAACAATACACAACCAGAACCAATATCTAAAGACTTTATAAAAACAGGTAAGAAACAGTGCAAAAATACTGTCAAAAGTCAGTTTCATACACTTCATAACTGCGTATAAAACTGGCAAGCATAAGCTTATTTACTGATATAAAAAAAGCACATAGAAGAGCATGCATAGATTTATTTAAGGCTTTTAATATCATCGAGAGAGAGTCTATAAAAGTGAAGTTGACATGTGAATATTAATCACTCCCCAACTCAGGGAATGTCATATAAACGTCTCCGCCTTCCTCTCTCCTTACAACTAGCTTGTCATAATGAGACTGGACTTCCATCTTGCACGGTAGCAAGTGGACACCTCGGGGAGAAGAATGTGTTCTCAGGATCCCAAGTCCCCACTCTGGAATGCATGTCTCACAGCAGTAACTCAATAGGCAGTTACATGTCCAGGTCAGCCCATGCCAGCCAGCCACGTGCGACTGACAGCCCTGCAGTTCAGTGGTGTTGGATGTCAGAAGGCTTCTGTGGACTGACTCAAGAACCTTAAGAACAAACCGGTTTCTACATTAGGGACTTGTCTGTACATCCGAAATGAGGCCTATTAAATGTCAACTGGCTTGAATGATATAACAATTGACAACATATTAAAGACAGAGACCAAGGAAAACTTCAAAATACTGAATTAAGTAGCACAATTATAGTCCAGTGAAACAGATTAGCATGTTACTTGATGTAACACAGGTTATATAAGGTTACATATTTAATAGTCATCTGCATATGTAAACCCTTTTTTATCCCATTTACATATATATGCTCAAGCAAGTCAGTTGACTACTGAAGGAACAAAGGACATACACAGGAAATCATCTCTGATAAAGAGTAACCTTACTTTTGAAAGGATAAGTTCGATAGATTTTAAAGATTCCAAACTGGCAAGAAAGTTCAGTCAAAGGAAGTTGCAGTAACATTTTACAATGTTCACGTCGGGGGCAGAAAATGGCTCTGAATTACAGCTCTCAGTTCCAAGCTGAAGGTATTTATTAGCTAACACTGCAATTCAGGGAGGTGGGCGGCCCCTGAGAAATGCTGAGAATACCAGGCACCTCTGCTCTGAGAGCCAGCCGAGCTCAACTCAGAGCAGGACTCCTGAGCTGTTAGCCAAACAGTTCCACCCCAAGGCACAGAAAGACCCCAATCCAATGTTTCCAGGCTTGTCCCCAAGACCTCTCTCGGGTAAGGTGGGCTCTCTGTTTGCCTTGAGGAGGAGGTTGGGAAGAAAGGTCCCATCACAGACTGGATGAATAGCAATCCTGCCCCTCCCTAGACAGCCTTGCAGCTTGTAAAAAGTCTGCAAAGAGCCCAGAGCTTCACCCGTTTCACCAGACCATCTAGGCTGTGTAGAGGCCATGATGAAAGGAACACGGTCTGCAGGAAGGGGCTGGAGACGATCTGACCACACGTGTATCATTATGCCAAAGGCAGCCACTGGGGATCCATAGAAGGTCACCTCAAAATAAGCCTGAGAGACGGCTGCAATCTTTGTTCAAACAGGACTGATCATTGAATCCAGCTTTTCTTTCATTCCTTTCTAGTCCTGAACGATAGTGTCAATCACCAAGGGGAAAGAGGGTGGAAGGTCAGCTTCCTGGTTGCTGACAGCACCTGGCTATTTTCATTCTGGTTACTTCCATTTGCCAGATTCTATTCCTTGAAACCATGCAAATGCCAGATTTTACTTTTTGAAACTATAGAAGCATGTTAAGGTAAGAATTAGATTTCCTAATTTTATAATTTGGAGAGATTTTAAAGAGTGATTCCCTATGACTAGATTCAACTATTTTGTAAGGGTTGCACCAGAAGGGTAAGGAAGGAAAAGGGGTTGCTGTCGAGAGCTGCTCCATAAAAGCAAATGAGAAAAGGAAAGATCGGCACGCAGGGTACTCTTAGAAAGGAGAGGGTGACATCAGAAAGTATTCCCACTTGTGCTCTCAAGTGAGCCAGGGAACTGCCATTATGTATTGACATCTTCCTGGTTCTCATGCCCTGATTACAAAGACGGCATGCTGGGAAGGGGGTGCTCCACTTTGCAGCCACCCGGGGGGCCCCCAGGAGGGACACAGTCAAGACGCCCAGGAGCTGCGATGGCTAACTCTGGAACCGTGTGGATGAGCAAAACATTCTGCTGAAAAGGCTGCCAGCAAAGGGAGGGCCACTAGCAAGCAAGGGGAGGGGTCTTCCTGAGCAGTGGATCGAGGCAGGCATCGGAACCCAGAATGTTCGTCAAGCTCTCTCACAACAGCGAGGACACAGTTTAAAACGACCAGCGAGGGTGGAACCGATCTTCCCACTGCAGTGAGGTCTTGCCTAGGAGTGCCGCCTCACTTCCACCCCCCTGACCTCGCAGAGAAGGACGGAGTAGGAGAGACACCCCCGAGTTCAAAAAGTTCTTTGTGAGTCCAGAACATTTTGATAGCAACTCCAAAGCTGATCTAAAAAGCCTTCCTCTTCCTCCCCCCATTTACAGCTCTTCTCTGGGCAAGCTCCTGGTGTTCTGGGGAAAGAATGGCCTTGATGGCCCAAAGCATGGCAGAGGGAACAGACACTTTCTAGACAGATGTTCATCACGGTCAGGCTTGCCCATCGGCTCATGCCCTCCTGTCTTAAAATGTCCTTGAATTTATTTTTAAAATGGGAAGGCTGACTGAAGCTGAACAATAGGAACTGATGTGCATCCTCCCTTTTACAGCACAAACAACAATAAATTATGCAGTCTTGTGACATCCATTGGGTGCCAGATATTCAATGCCAGCCTCATGGACGTTTTAATAGAGAACTTTTTAGTCTGGCCTTGAGAAAGAAGATGCAGCTATAATAAGCTGGAAAAAATAAGTAAAGTAGTGAGCTGGTAAAAACACCTACCCATCTGAGTTTCTAATGGAAATTCAAAAGCTCAGAGCAGGCAGGATAAAGGTTGGGTATTGGGCAAGCAGGTCATTGAGTTTCTCAGGATCCTGGGAAGAACAGCAATTTTCAGGGTAATACATATGAGTTGGCAGAATTTGATTGAATACACCTGCCCATTTCTCCCAGGAATGTTGCTGCTCCTTTCAATAGTAAGGTCTTCTGCCCCCAAATGTCTTAGAAGCTGAGGCAAAGAGAAGGACCACTCTGCTACCTTGCTCAGAGCTCAGAAGTGTCAAACATAATCTTAACGTCCTGGAGTTGGTAGGGCCAACTAGGACTATTTCAACCCTATAGGCCCATAAAGTTCTAGACCAATGGAGATTTTGTGCAGTCTCCATGAAAACCCCAACTTTCTCCATTGGAAAGTAGTGCTAGATGAATTGTTACTTTGCTCACAAAAAGAAATGACTAAATAAGAGCATGATAAATGTCTGATAAAATCCATAGGCCATAAAAAACACAGTTGCAGAAGAATCTTTGGTAAAACATGAAGAAACTGAATTCCCACAAAGAGCCACCTTAACAGCCCAACAGGAATTACCTGGTGCTTCTGGAAGTTTCTTACTCTAGGATGCTGACAGTTATTCCCAACATGAAAGAGGAATGAAGGGTAGAGTAACACTGATATGCCTGTGACTCAGTCCCCATTCCTTGAATCTAAGCTCCCTGGCAAACAGAAGGCCCCTGTGCTTACCCACCCTTTGACCTCAATTGACTGACAGATTCCTTCCCCCCTCAAAAAATCAATAATCTACCCACTTTCTCCATCATAGACACGACTGGACGTGGGGAAGAGATTTGAAAGCACACTTCGCTTTGTCGCTCTGGACACCTTTGGGCCCACAGATTATGTTCCATAACCACTGAGCTGAGGCCAGCTAATACAGACTATACATCAAGAAAGAACAACAGCTGAAAACCCCCAGACATGTGCCTGATGGCCAGCCCTGCTTATGAGAATCCAAAGTGCACTGACATCTCTGCAAAGTGTGACTCCAAGCCCCAGGAGACAGCCCACTCACCAAGTGAGTGTGGGCAGGATAAAGGTTAAAAGTGTCCTGGGCAGCCATGGACAAGTCCCACGGGACCCCGCCCAGTAGAGCCCACAGGGACCCTCTATCCAGGCCGATGGAGGAAGATGCCAGAGGACCAAGGGACTTGGAGGCAAATGACTAACGACAGTCAAAAAAATAGTCGTGCTTTTCAATCTAGGACCACAAATGTTGTAGAAGTAAAGTTCTCTAAGTTTATTACTCAAAACAGAACACGTGGAGATGTCCCTGACCTTACTGTTCTCTCCAGCTGAGGGGAGGAACTCAATTCCTTGCCTATAAAGGGACCAGCGATTGGCATCCCTGCGTAAAGCCACCAAATCCTTATCTGCTTCCCATCCAGGGAAAGAGATGGGTCTAAAGATAAATACAGCCAAAAGGCGGTGTCTCCTTAGAGCCTCAGGATTCCAGTCAAGCACAGCAGGACATGGGCTGGCTTTGCTGGCAGCCTCAGCCTAGCTCAAGGATGAAGACATCAAACTCAGCTCCCCCTGGTCCAGGGACCACAGCAAACAAGCATGAACCCTGGGTCAGCGCATCCAAATGAGCCGGATGAAAGAAACAAGACATTTCAACTGGAAAAGCTGCAAACCCAGAGGCCTGAAAGTGTTGGCGGCCTTGTGGTGACATAGTGTCTTTTTTTCCCCTCTCCATTTTTTATTTTCTCCCCACTGCAGCAACAGACCCCGGCAGCCCCAGCTTCAGACTTGCTATGTCGTCAGGAACTCATTCCAAAAGCTCTAACTAGATAACTAATTTAATACACTTTGCTTCAAGGTTTATTCCTTGGCTTGCTTCCCAGATATAAAGCATCTCTGGGCAATTATGATGCAGATGCCGCTGAAAGGACTTTAAATGGCTGCTGCTAATTTAACAGGAGATAGGTTGGCATTTACTGAAGATGCAAAAAGGAATGCAAAACGGGCTCAAGGACCAAAAGCATTTGTTTTTAAAAACAAAATATGGGGAATCACTTTTAAATGTTTTCCTTTGGGTTTCAATATAAACTCTGGCTAGGAAGTTGGATACCGAACCTACTTCTTCTCTATATTTTGTGCAATCAGGAATATTCCCTTGGCACCAAGTGGCAACATTGGTGAGTTGAAAGGATGTCCAAGAGTGATGGGCTCAAAGAGACTGCACATCTACTCGCTGCCCACATGAGAAATCAACAGTGCTCACATGGGGGCTGACGGAGGAAAGAGGAATACCGATGTGGTTCATCAAACAATAAGCCAGTAACTGCAGACCAACCATTAAAACATCCCTAACGGCAGAGGATCCCAAGGATGGAAAGTCTCTAAGGAAAAGGAAACAAGTTTCTCTCTGCCTGCTGATGATCCGTGTTCTGAGCATCTCCTCGTGAGAGCTATGAGCTCTGATCCACTGAAAATACATGTCATCCCAGTGGTTTTCCTTTTTCAGATCATTCAGCAGAATTCCAGACCCTAGGGGGCTCAGTAGAAGCTCTACTCCCGACTGATTCTTCAGTCCTTGGAGGAGAAGGGAAGAGACCCTCCCTCGCCAGATACTCTTGAGTCCAAATACAGACTCAGGTGTGAAACTGAGTTTTTCATAGCTGGCCAGGTATGAAACCAAGTTGATTTATACTCCAAAGCCCATCGGGAATCAGCTTCCACACCTGTTTACTGTTGTGTGGTGACTGGAAATAACAAAGGCACACTCCTTCTGGTGGGTTGGATGCCATTCTTTCCATGTATTTACAGCTCAAGAGGGGGAAAAAAAGCAGCGGAGGAATACATCATGGAATACCCACAAAGGTCAATTTTAAGACAAAAGCCACAACTGAAAAGTTGTACCAAGAAAAGCCAGATGACAGAAGAATTCCCTAAAGTCAGCAAGAGGGAAAGCACCCGGAACATGCTTTATTATGTACTAACCTATGAAGTTCAGGACAGTGACCAGGGAACCAATGGTGTTGTAGTTTGGTCACTCAGCATGTCTGACTCTTTGTGACCCCATGGACTACAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCTAGGCGAGAATACTACAGTGGGTTGTCATTCCCTCCTCCAGGGGATCTTCCCCACCCAGGGATCAAACCCGTGTGTCTCTTATGTCTCCTGCATTGGCAGGCGGGTTCTTTACCACGACAGCCACCTGGAAAGCCCCCATCAAGCCACAGGAACCCCCAATATAAGAGAATAGTGTTGTTTTTCCCCTTCAGAAATAGGGTCTTAGTGCTTTATATTTTAGGATGCACTCATTTCCTTGCCATCTTTGATTTGGATATGAGCAATAAGGCTGATGAATTTCAGGGTTGGTCACAAATCTGGCTGCAACTTCACCAGAGATGTGTTCCCTTCTGCCTCTGCCCCCCAAAGGACGCACCAGCCAACCCTCCCTCCATACAGCCCTGTTTACACTGCAGATCAGTCAAAATGTGGTTCAAATGAAAAGGACTATATTATTGTGAAAACTGCCATAGGATGATTCACAAGTTATCCCGAGAGAGGAAAAAATAA TCONS_00070077 TCONS_00070077 s 5' 0 TCONS_00070077 TCONS_00070077 s 5' 0 EMBV3_22249 AGTACAAGGACAGCGCTTGGATCTTCCTGGATACGGGGAGATTGTTAACATTAATCTGGT Variant GeneID:613705|LOC613705:XM_002699533:12_cdna 182^233 1 EMBV3_08305 GeneID:613705 X GENE LOC613705 NULL similar to RNA binding motif protein, X-linked 2 EMBV3_19655 ATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTCCTCCTGTCCTTCAGCTCCCT Gene BVT0102_054005 - 0 NULL GK000023.2:9437262-9521253 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19424 GTTAGTGGATGTGAACGTGTACCTGATCATCGCCATCTGCTCGGTGTCCAGCCTGTTGGT Gene GeneID:616121|PCDHA9:XM_002689246:134_cdna Constitutive 0 NULL GeneID:616121 7 GENE PCDHA9 NULL protocadherin alpha 9 EMBV3_39006 GGATTCTCTACCAGAAGAATTTTTTGTGAGGCATCTTCCTCTGGAAGAGCAGGCTACAGA Variant GeneID:537349|DZIP3:NM_001076092:101_cdna 337^399 4 EMBV3_41756 GeneID:537349 1 GENE DZIP3 MGC137859 DAZ interacting protein 3, zinc finger EMBV3_29138 CTGCAGCGATTCGTGGGGTCCGAGGCAAATTGGGTCTTCGTGAAATTCGTATCCATTTGT Gene GeneID:785629|NDUFA2:XM_002689738:8_cdna Constitutive 0 NULL GeneID:785629 8 GENE NDUFA2 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa EMBV3_25471 GCCTCATCCACATGAAAGCAGCTGAACGTCTGCGTCGACAGTAACTTGGTGATTAATGAG Gene BVV0102_409477 + 0 NULL GK000003.2:119237013-119457252 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31058 GAGCTCCTGGCCATCCGCTTCCTCAACGCCGAGAATGCACAGAAATTTAAGACGAAGTTT Gene GeneID:533251|RANBP1:NM_001034586:82_cdna Constitutive 0 NULL GeneID:533251 17 GENE RANBP1 MGC127635 RAN binding protein 1 EMBV3_00090 CCCAGCTCTTCAGTACACTGTCGTCACTTAGTTTAGCACAGGATAGAAACTCGGGTAACC Gene BVV0102_050161 - 1 EMBV3_10234 GK000002.2:38838128-39142478 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232083 TCONS_00030692 2 XLOC_141569 XLOC_016945 NonCoding TCONS_00030692 XLOC_016945 NonCoding NonCoding - 11:27307073-27307552 - TSS21691 479 1 TCONS_00030692_1 34 0.369519832985386 1 0 5.5868060809516e-05 0.000130688257443542 1.01817252235027e-05 2.3705861395476e-05 7.5277733570961e-05 0.000146876865797368 1.38719991548288e-05 2.30344432974922e-05 4.41495801372459e-05 3.55964851158234e-05 1.05858365363841e-05 1.58767605117036e-05 1.72731652930942e-05 0.00026714101399094 8.70215884316647e-05 0.00206968677146272 0.00207289587646481 0.000738456697488396 5.4060643990906e-06 4.16789203195186e-05 3.5116551268594e-05 0.000237802526643714 0.000414230875993087 0.00080530142092549 8.5859455274109e-06 4.60036489898077e-05 5.69759934283475e-05 7.0493354868441e-05 9.80835620885628e-05 7.01801771417703e-05 XM_005194400.1 FAM217B PREDICTED: Bos taurus family with sequence similarity 217, member B (FAM217B), transcript variant X1, mRNA. 2e-57 226 88.33 0.37160751565762 0 noncoding 0 0 0 0 -1.70767795796122 0.0187036130359615 -0.496660969168083 0.000990531285618173 GAAAATATCTGCCTATGAGAGTCTTGATTGAAGGCAGAGGAGAAGGGGACGACAGAGGCTAAGATGGTTGGATGGCATCACTGATTCGATGGACATGAGTTTGAGCAAGCCCCTGGAGTTGGTGATGGACACGGAAGCCCAGCGTCCTGCAGGCCACGGGGTCCCAAAGAGTCAGACACGACTGAGCCACTGAACTGAACTGAACATACAATCGTTTCTCCAGGTGTTTTGGTTACCCGAGGTTCTATCCTGTGCTAAACTAAGCGACGACAGTGTACTGAAGAGCTGGGTCATTTCCAAATAAATTAAAGTTCTGAAACATTCACGCCTTGAAAGGACCTCCCTTTTACACAGAAACAAAAGAGATTTTTGACTATCCAATAAGAGTGTCTGGCACCATCCTGACATGTGAAACGTAAGAAAGCAATTTGTTTTGTTTTGTTTGGTTCTGATCTTGGGTGTGTGTGTGTGTGTGTGTN TCONS_00027373 . 5' 43375 TCONS_00027373 . 5' 43375 EMBV3_08463 CAACACCGCTGTCTTCATGTGGAGCCCTTCCCACAATCCTAACTCTGGTCATTTGTGCCT Gene GeneID:508246|MYST2:NM_001076818:70_cdna Constitutive 2 NULL GeneID:508246 19 GENE MYST2 MGC143325 MYST histone acetyltransferase 2 EMBV3_41204 CCCATGTGCTGCCGGGTCCAGTATGTCTTTTTATGTGAGGTGTGATTTCCGTGTCTTACT Gene GeneID:511229|LOC511229:XM_002684982:77_cdna Constitutive 2 NULL GeneID:511229 1 GENE LOC511229 NULL similar to mCG142710 EMBV3_09673 AGTTCCCACACTGGTTGGCTTTGGGCCATGTGGGCACAGACAGGAGAATGGAAGGAGGAT Gene BVT0101_049199 - 1 EMBV3_09194 GK000014.2:8304706-8970644 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21639 GGGGCCCACACCTCACTTAGAAATCCACCTCCAGAGCAACGCTTGTACCACAGTCAAAAA Gene GeneID:535844|OCRL:NM_001102191:14_cdna Constitutive 0 NULL GeneID:535844 X GENE OCRL MGC179390 oculocerebrorenal syndrome of Lowe EMBV3_05584 CTCTGGTCGCTTCACAGCCCCGGTGACTGCCATCTTCCAGTTTTCCGCCAGCCTGCATGT Gene GeneID:506102|LOC506102:XM_002694132:494_cdna Constitutive 0 NULL GeneID:506102 16 GENE LOC506102 NULL similar to family with sequence similarity 132, member A EMBV3_34631 ACACCTGCAAAGATCCTCCCAACACCACCAGCTAGCATCAAGAGTACTAAAGCAAGCAGC Gene GeneID:780855|PPIP5K2:XM_002689420:22_cdna UTR3_Alt 2 NULL GeneID:780855 7 GENE PPIP5K2 HISPPD1 MGC143083 diphosphoinositol pentakisphosphate kinase 2 EMBV3_25875 AATGGATGAAGACATTGCTCACAAGCAGATTTCCCCAGCGTCCATTGAGCTCTCGGCCCT Gene GeneID:100337106|LOC100337106:XM_002698936:190_cdna Constitutive 0 NULL GeneID:100337106 28 GENE LOC100337106 NULL glutamate receptor delta-1 subunit-like EMBV3_06044 ATGGGGAAAGGAAAGAGGCAGAGATAAGTGATTTTCTGAATGATCCTGCTTCTTTTTCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08985 TCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAAGCAG Gene BVV0102_040808 + 0 NULL GK000023.2:26148498-26353278 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00152753 TCONS_00062753 TCONS_00063037 TCONS_00166618 TCONS_00230737 TCONS_00200007 TCONS_00116428 TCONS_00152743 TCONS_00210177 TCONS_00117964 TCONS_00232348 TCONS_00186108 TCONS_00080356 TCONS_00206762 TCONS_00006151 TCONS_00124583 TCONS_00230697 TCONS_00249941 TCONS_00009883 TCONS_00199544 TCONS_00208423 TCONS_00240034 TCONS_00240870 TCONS_00167518 TCONS_00238439 TCONS_00011804 TCONS_00040583 TCONS_00156741 TCONS_00251524 TCONS_00021596 TCONS_00066192 TCONS_00219017 TCONS_00089951 TCONS_00189806 TCONS_00206861 TCONS_00199595 TCONS_00036106 TCONS_00062743 TCONS_00019962 TCONS_00198804 TCONS_00063180 TCONS_00030202 TCONS_00185807 TCONS_00240878 TCONS_00090595 TCONS_00143553 TCONS_00124845 TCONS_00176254 TCONS_00141421 TCONS_00006827 TCONS_00252649 TCONS_00161093 TCONS_00142489 TCONS_00018649 TCONS_00054939 TCONS_00249012 TCONS_00117619 TCONS_00071185 TCONS_00031911 TCONS_00223013 TCONS_00219174 TCONS_00233344 TCONS_00188225 TCONS_00230109 TCONS_00213731 TCONS_00070810 TCONS_00220541 TCONS_00175199 TCONS_00224114 TCONS_00250938 TCONS_00242006 TCONS_00046756 TCONS_00010780 TCONS_00210172 TCONS_00209529 TCONS_00206678 TCONS_00036105 TCONS_00063076 TCONS_00142231 TCONS_00115687 TCONS_00251705 TCONS_00109028 TCONS_00221188 TCONS_00223441 TCONS_00176249 TCONS_00038457 TCONS_00165813 TCONS_00090400 TCONS_00074801 TCONS_00156828 TCONS_00220341 TCONS_00209829 TCONS_00161792 TCONS_00153777 TCONS_00007360 TCONS_00057311 TCONS_00135547 TCONS_00252954 TCONS_00219680 TCONS_00073576 TCONS_00040195 TCONS_00218856 TCONS_00039853 TCONS_00238420 TCONS_00238357 TCONS_00030295 TCONS_00072815 TCONS_00218553 TCONS_00148279 TCONS_00229939 TCONS_00039908 TCONS_00048558 TCONS_00245928 TCONS_00249773 TCONS_00020011 TCONS_00070957 TCONS_00162473 TCONS_00006356 TCONS_00088087 TCONS_00056728 TCONS_00037933 TCONS_00157440 TCONS_00250749 TCONS_00189890 TCONS_00066279 TCONS_00064461 TCONS_00219970 TCONS_00238326 TCONS_00166733 TCONS_00156732 TCONS_00040178 TCONS_00201770 TCONS_00110420 TCONS_00107582 TCONS_00185942 TCONS_00056147 TCONS_00088288 TCONS_00239418 TCONS_00116101 TCONS_00063487 TCONS_00071861 TCONS_00036946 TCONS_00109264 TCONS_00050046 TCONS_00176255 TCONS_00124110 TCONS_00040698 TCONS_00048821 147 XLOC_155966 XLOC_092518 XLOC_037480 XLOC_037764 XLOC_101455 XLOC_140227 XLOC_121659 XLOC_070595 XLOC_092508 XLOC_128687 XLOC_072130 XLOC_141833 XLOC_112161 XLOC_049240 XLOC_125283 XLOC_001714 XLOC_076127 XLOC_140187 XLOC_152884 XLOC_005436 XLOC_121197 XLOC_126936 XLOC_146699 XLOC_147534 XLOC_102354 XLOC_145106 XLOC_007354 XLOC_024399 XLOC_095201 XLOC_154465 XLOC_012269 XLOC_040909 XLOC_132336 XLOC_054732 XLOC_115843 XLOC_125381 XLOC_121248 XLOC_021081 XLOC_037470 XLOC_010640 XLOC_120457 XLOC_037907 XLOC_016457 XLOC_111860 XLOC_147542 XLOC_055375 XLOC_087974 XLOC_076388 XLOC_106033 XLOC_085849 XLOC_002389 XLOC_155590 XLOC_097985 XLOC_086914 XLOC_009332 XLOC_032748 XLOC_151955 XLOC_071785 XLOC_042957 XLOC_018156 XLOC_136319 XLOC_132493 XLOC_142826 XLOC_114268 XLOC_139601 XLOC_130524 XLOC_042587 XLOC_133858 XLOC_104982 XLOC_137410 XLOC_153881 XLOC_148670 XLOC_026895 XLOC_006331 XLOC_128682 XLOC_128040 XLOC_125199 XLOC_037803 XLOC_086656 XLOC_069856 XLOC_154646 XLOC_064933 XLOC_134504 XLOC_136741 XLOC_106028 XLOC_022281 XLOC_100653 XLOC_055181 XLOC_046435 XLOC_095288 XLOC_133658 XLOC_128340 XLOC_098677 XLOC_093539 XLOC_002921 XLOC_035110 XLOC_081770 XLOC_155895 XLOC_132999 XLOC_045340 XLOC_024012 XLOC_132175 XLOC_023670 XLOC_145087 XLOC_145024 XLOC_016549 XLOC_044583 XLOC_131873 XLOC_090161 XLOC_139433 XLOC_023725 XLOC_028690 XLOC_150855 XLOC_152716 XLOC_010689 XLOC_042734 XLOC_099354 XLOC_001919 XLOC_052874 XLOC_034531 XLOC_021762 XLOC_095895 XLOC_153692 XLOC_115927 XLOC_040993 XLOC_039185 XLOC_133287 XLOC_144993 XLOC_101569 XLOC_095192 XLOC_023995 XLOC_123415 XLOC_066324 XLOC_063492 XLOC_111995 XLOC_033950 XLOC_053075 XLOC_146084 XLOC_070270 XLOC_038214 XLOC_043631 XLOC_021259 XLOC_065169 XLOC_030177 XLOC_075662 XLOC_024514 XLOC_028952 Coding TCONS_00063487 XLOC_038214 NonCoding NonCoding - 15:19911470-19912752 - TSS47230 1282 1 TCONS_00063487_1 67 0.999219968798752 1 0 0.000127936029395653 9.17062658717937e-05 8.18314929850691e-05 5.31053848615394e-05 3.83862007692534e-05 4.14504082240342e-05 3.66155071199037e-05 9.3342542597709e-05 0.000142868560875806 0.000182105794932418 0.000115314176713717 0.000592086251997118 4.72528536473549e-05 0.000140849193612007 0.000199068739116394 0.0049393326901842 0.0017848333210037 0.00508423071029997 8.89727488761304e-05 7.85121412812907e-05 3.66359677067345e-05 0.00142164529096076 0.0028077711046913 0.00202140642150578 8.09897640299424e-05 8.93525617697323e-05 6.91146032189968e-05 0.000537406910919829 0.000427515932212117 0.000608492059792261 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 6e-49 199 69.48 0.399375975039002 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 TAACATCATATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTGTGTGTTCCAGACAGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATAAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGTACCACACAAGGGCCAATAAGCTCCAGAGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGACAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATTTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAA TCONS_00058453 . 3' 291441 TCONS_00058453 . 3' 292722 EMBV3_27069 CCCGGCCCCTCTCCCGTTTCCAGAGCCGTGTGGGGTGCTGAGGCTTGGGCAGCATGACGA Variant GeneID:533842|OBFC2B:NM_001101151:1_cdna 213^299 1 EMBV3_24751 GeneID:533842 5 GENE OBFC2B NULL oligonucleotide/oligosaccharide-binding fold containing 2B EMBV3_27218 CAAGTTCTTCCCTCATGTCAGTGCTTCACTCATCCTACATCCCTTCAGTGCAGACAGCTC Gene BVT0102_170495 + 0 NULL GK000022.2:57857030-57865202 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127606 TCONS_00127607 TCONS_00127605 TCONS_00127608 1 XLOC_077694 Coding TCONS_00127608 XLOC_077694 Coding Coding ZFYVE20 22:57836919-57860264 j TSS95412 5788 1 TCONS_00127608_5 783 0.0202142363510712 12 0.752570253598355 9.20234902954345e-05 0.000126669383122278 0.000298915547388109 4.15364060607293e-09 4.79818572073225e-05 5.33926002624827e-07 1.46177677986527e-07 9.20583558385923e-06 5.44192231136813e-05 2.71777120556063e-05 7.86047718405702e-05 1.40913135998926e-25 7.68200775072982e-05 1.05395871309608e-24 1.52394045085084e-12 0.00122484764349569 4.06000926085014e-07 9.05121112029109e-13 6.07429342944194e-07 8.98884948724839e-05 1.36128741042916e-10 2.24074110273836e-07 0.000203854622881641 0.00151716431593825 3.20939673810458e-05 5.21262429479816e-05 9.22835867474584e-08 0.000538150854104248 2.03426237084922e-07 0.000267854878609104 XM_005223134.1 ZFYVE20 PREDICTED: Bos taurus zinc finger, FYVE domain containing 20 (ZFYVE20), transcript variant X3, mRNA. 0.0 9797 100.00 0.938320663441603 NM_022340.2 ZFYVE20 Homo sapiens zinc finger, FYVE domain containing 20 (ZFYVE20), 0.0 3157 81.58 0.555459571527298 TCONS_00127608_5 sp|Q9H1K0|RBNS5_HUMAN RBNS5_HUMAN Rabenosyn-5; 0.0 1272 87.02 0.998722860791826 2 coding 0 0 0 0 -0.00587346904790566 0.980891495209924 0.00871555558613517 0.923134945774367 CCCGCTTCGGCAAGCAGACGGGCGGACTTCTGCTCCAGAGAGGACACCTCATCTGGGACCATGATGCCACTTCCCCATCGTCTGGGTGCTGCTTGATCCCTTGTCTAAGCTAATGCTGTGGGATCCCTTGTCTCTTGTGGAGGAATCCAGCTGACTCGTGGCATGAGGCCCCTGCGTTTTGGGGGTTGAGAGAGACACCCCATGGCGTCTCTGGATGACCCAGGAGAAGTGAGAGAGGGCTTCCTCTGCCCTTTGTGCCTGAAGGACCTGCAGTCTTTCTATCAGCTGCAGTCACATTATGAGGAAGAGCACTCCGGGGAAGACCGTGATGTCAAAGGGCAAATTAAAAGTCTTGTCCAGAAGGCTAGGAAAGCAAAGAACAGGCTGTTGAAACGGGAAGGAGATGATCGAGCTGAATCAGGCACCCAAGGATACGAGTCTTTCAGCTATGGAGGGGTCGATCCTTACATGTGGGAACCCCAGGAGCTTGGTGCTATGCGAAGCCATCTTTCTGACTTCAAAAAACACCGAGCTGCCAGAATTGACCACTATGTCGTTGAAGTCAATAAATTAATAATCAGGTTAGAGAAGCTGACTGCGTTTGACAGAACAAATACCGAGTCTGCGAAGATCCGAGCAATAGAAAAGTCCGTGGTGCCTTGGGTCAACGACCAGGATGTCCCTTTCTGTCCGGACTGTGGGAATAAGTTCAGCATCCGTAACCGCCGCCACCACTGCCGCCTCTGCGGGTCTATCATGTGCAAGAAGTGCATGGAGCTTATCAGCCTTCCCTTGGCAAACAAGCTCACCAGTGCCAGCAAGGACTCCCTGAGTGCTCACACCAGCCCCAGCCAGTCACCCAACAGCGTCCACGGCTCCCGCCGGGGCAGCATCAGCAGCGTGAGCAGCGTGAGCTCCGTCCTGGACGAGAAGGATGACGACCGGATCCGCTGCTGCACACACTGCAAGGACACGCTGCTCAAGAGGGAGCAGCAGATCGACGAGAAGGAGCGCACGCCCGACATCGTGAGGCTCTACGAGAAATTACGGCTTTGCATGGAGAAAGTTGACCAAAAAGCTCCAGAATACATCAAGATGGCAGCATCGTTAAATGCTGGAGAGACAACCTACAGTCTGGAACATGCCGGTGACCTTCGAGTGGAAGTGCAGAAAGTGTATGAGCTAATAGACGCGTTAAGTAAGAAGATCTTAACCTTAGACATGAAGCAGGACCCGCCGCCACATCCGAACACGCTGCGGCTGCAGAGGATGATCAGATACTCGGCCACACTGTTTGTGCAGGAAAAGTTGCTTGGTCTGATGTCACTGCCAACCAAAGAGCAGTTTGAGGAACTGAAACAGAAAAGGAAGCAGGAGATGGAGCAGAAGAGGATCCTGGAGAGGCAGGCTGCCCTGGAATCCCAGCGGAGGCTTGAGGAGAGGCGGAGTGACCTGGCGTCCCGCGCGACCAACGGGGAGGTAGCGCCCCCTCGCAGGGGTCCTGCCCCGCTGAGAAAGGCTGAGGGCTGGCTCCCGCTGTCGGAAGGCCAGAGGCAGAGCGAGGACCCGGACCCCCTCCTGCAGCAGATCCACAACATCACGTCCTTTATCCGGCAGGCCAAGGCCGCGGGCCGGACGGATGAAGTGCGCACGCTGCAGGAGAACCTGCGCCAGCTGCAGGACGAGTACGACCAGCAGCAGACCGAGAAGGCCATCGCACTGTCCCGCAGGCAGGCTGAGGAGGAGGACCTGCAGCGGGAACAGCTGCAGGTGCTGCGGGAGCGGGAGCGGGAGCGCGAGCAGGGCCAGGCGGCCTCTCTGCACACGCGGACTCGGTCCCTGGACTTCCGGGAGATCAGGCCTTTTCAGCTGGAGCCGAGCAGGGAGCCACGCACGCACCTCGCTCACGCTTTGGATCTGGGCTCTTCCCCAGCTCGGAGCGGCACTGCCACCAAGACCTCTCCACCCAGCTCGGCTCCCGAGCCCTTCCGAGGGTGGTCTGGGCCCCCAGCCCTGGGCCAGGAGTTCCTGCCCCAAAGCACCGCGTCGCCTCGCAGTGAGGCGCCCTCCCTGAATCCCTTCGATGAGGAAGAAGACCTCGCCAGCCCCTCAGCTGAGGACACGGCCAACCCTCCTGCTCCAGAGCCTTCCCTTGGCCCGCCAGCCTGTGTGCTCAGAGAGTACAACCCTTTTGAGGAAGAGGATGAAGAGGATGCTGTGGCGGGGAATCCCTTCACTAAGCCAGACGGCCCCGCCCCCAACCCCTTCGAGGAGGAAGATGAGCACCCGCCGCGGACACCCGCATCCCCCCCTGTCCCTGGCAACCCCTTTGAGGAGGCCCCCTGCACCAACCCCTTTGAGGAGGAGAGCGACGGTGGGCAGGAGGGCGCCGAGCCCATCGAGGAGGAGCTGCTGCTCCAGCAGATCGACAACATCAAGGCGTACATCTTCGACGCCAAGCAGTGCGGCCGCCTGGACGAGGTGGAGGTGCTGACCGAGAACTTGAGGGAGCTGAGGCGCACCCTGGCCAGACAGAAGGGGGGCACCGACTGACCTGGCCGGGCGGCGGGCTGGGGGCGGAGCATGGAGGGGGAAGGTGGAGTTTAAGGTCCCTGCAAGGTTAGGGTGGAGGAATTGGCTATTTGGTGCTGTACACTTGGGAGCTTTTCCTGTGACAGCTGAATAATAAAATGGGAACGACAACAGGGAGAACCAGCATGCATTTGCTGCTCTTCCTGAATTTTTTTTAATAATTGGGTTTTCCCTGTAGAAGGGACGTGAAATCTTCACTGCCGAGGTGTCACAAGTGCGGTTCTGTTGGGCCGTGGGCAGAAATGGCTTCCGTGTACACCTTGTGCCCGCATTCGCTCCTGCCCGGTGTCGGTCAGTTTGCAGTGTTAGAGGGCAGCCTTTTATAGGGCCCTTCCTTTAGCCAAGACACACAGCATAGAGCTCTTTACATCTTACTTGGTTCTGGCGGAAGTCTGTCCCATTAGACTATGTTCTTTTGCCTGGGACTTCCACTGCCCTCTTGGGCATGTCCTGTGTGATGGCCGGGGACGGTCTCACTGTGGAGGCAACAGTGTAGACCCAGGAAAGCCCCTCTTTAGAGGGGTGATGGGGGTGAGGTTTCCTCACGGTCTCTTGCCCTCTTCCTTTCAGTTCTTATTTCTCTCTTTCAGGAAGTTAATCTCCCAGTGCAGGGTTATCACTGTGAGTCTGTTCATGAGCTTTTTAGAGAACAGCAGTTTTTAACTTTTTGGCTGATAGAAGTAGTATACTTTGGGAGCAGAGTCTCTGTCCAAGTGTTGCTCTGTGGAATTGAATGACCACTGGGACAATTTTCTGTACCCGGAGAAAGCGTCCTCTAGAGCTTTGGCACAGTTACTCTGATCTGGGCTTTTTCAAAGGGCCCAGGCTATAGTTTAGGAGATGGTGGTCAGGAAGCCCTCATGAAACCTTGTCAGAAGAGCTGAAGTCCCCTGAGTCAGAAGGTCAATGACAGTAACTTCCAAGGCTCGTCAATGAGCCTTTTTGTCTTGCAGGTCATCTTGTGCTGACCGTGGGCACTGGTGAGATACTCTCTCACCTACATTTAGTAGTAGTAAGAAATTAAATGGGGAATTCCCTGGCAGTCCAGTGGTTAAGACTCCGAGCTTTCATTGCTGAGGGCATGGGTTTAATCCCTGGTCAGGGAACTAAGATCCTGCAAGGGGTGTGGTGTGGCCAAAAATAAATAAAAGTAAAATGTTTGCAGGAGGCACAACCCAGGATCATTCTGGTAGAACCGCAGTACTTGAACTCTTCACCAGTTAAGGGCAAAAAGGGAAATTGTGAATTTTCGCTTTGGTGCTTAGGTTTACAGGGACATGACCCTTAACTGACATCTGACATCAGATACCCAAGTGTGCTCAGCTCTGGGTAGAGTTGCTGCAGTTACGCTTGTTAAATAATGAACAATAACTCACCACTAGTCACTTTATACCCATAACTAACTCTGGCTCTTATGGTCCCTGGTTACTGGTGTAAGGGCTGAAATTTATTTTGTCTCATTCTGGGAAGACCCCTGTTGATCTTGGGAATGTCTGAAAAAATACTGTGGTGTAACAGTAATCTGAATTTGTGTTGACACTATTCACATTTCTTTAGCCCCTGCTGGCTCTTTGGGCTGAATGAAGAGGTCCTGTACAGAACCTTCCCGAATGAAGAAGCCTGGCAGTGGGGAGTGGGTGGGTGGAGCGTGTGTGGAGGACCTCTTGAGTTTGGGTCCTGTTCGTAAAGCAGTGTGAGTGGGTTACTAAGGTCAGCCAGTTACCAGCCTTGCTGATTGTCATGGTTTTGGGAAGCTGGCAGTCAGGCATCTCAGATGCTGCCTGGTACAGATGTCCTTACCCCCTCAAGGTCAGTGCTCTTCATGCTGTTACTCTTGAGGGACTTAGGATGACTGCACGCTCCTCGCTGCTCGGTCTGTCCTTTCTCTCTGACCGAGAAGAAGGAAGCTCTCTGCACCAAAAAGCAGGTAGTTCCGGAGCCAAGTGCTGCTTGCCCTCATAGTTATTTTTCTAATGAGAATATATCTCTTTTAGTTAGCTGGTGGTTTCAGTTAAGACTAGTTTAGCAAACATACCCTTTCCCTGAAATCAGCTGCAGGTAGCAATCTGTTAGTAACTTAAGAGCACTGAGAACCAGACCTATAAGAAACATGTTTTTAAATTTAAAAAAGAATCACTGAATATACTAAACCAAACTAAAACCCTCTGATGTGATTGAATTCCTCCATGGCTACATTCTCCTGTAATCACAGACATGACTGGAGTCAGAATTCTCTATCCCTCTGTTGTACCATTTCCCAGAATTCATAGACCCAAAGATGGGCACAATGTTGGATTTACAGGGATGGGGGAGCACCATGGAAAAAGTGGCCTATGAATTGCAACCACAACCACAACCACAACTTCAAGTTCTTCCCTCATGTCAGTGCTTCACTCATCCTACATCCCTTCAGTGCAGACAGCTCCATCCATCGCATCAGAAAATGAGCAAGTCCTTGATCCATCGTTGCCAGATGTCCCTAGACACAGATCATGTGTGGAAGAGACTCTGGGGATTCGGGCATCAAATGAAGCTTTTCCCTTTTATGCCTTGATTATATTTTCCCTTGTCTAATACACTAAGGACACTTATTCATTATACTCGCTGCTCAATGTGTCTCTTTTGTTCAGATACTAAAATGTACCTGAGTCACCAAGAGCCATGTAGGAGGCTGGACGTTGGCATAGATGGGTGATGGGACTCAAGGTGAGAGGCTGGTCTCTAATAGGTCACAGGCTGTGGTAGTAGATTGTGCTGGTCACCCGACATCGACAGTTGGAGGGTCATTGATTTGCATGTACTACTCTGGGGCCTTGTATTGGAACCTTTTTAAAAAAATAAAATAACAAGATATTCACGGTTGAGGGTGTGTGTGTATGTGTGTGTGTTTGTGCACACCAAGAATTACCAGATAACATCTGGTCATCTCCTTAATAATACCAGTTCTCTCGTTAATGACTTCTGAGTACAAGAAAACAGCCCCAGCTCCTGTGATCCCCGTGTGGTTATGGCCTCCAGACAAAACCAGGAGTCTTCCCAAGGGATAAATACGGGTTCCAGTTCTGCCCTTATGTTCAGTGATTCCTGCAGTGTTGATGAAATGAACTGTCTTACACAGGTGTCTTGCCCAAAGGTAGCAGAATTGGGCAACGGGAAGAGAGAGGAAGCTGCTGAGTGGGTCTTCGATGTTGCCATC EMBV3_07935 AAAGCCCACTGCGCTGTGTCATTCTTGTTGCACTCAGGGACATTGAACAAGGAGAAGAGC Gene GeneID:540253|LOC540253:XM_002696320:53_cdna Constitutive 1 NULL GeneID:540253 20 GENE LOC540253 NULL hypothetical LOC540253 EMBV3_36263 CCCCTCCTACGTACTTTCTTTTCATCTGAGTTCACTCCATCAGCTCCTGGTATCCTGGTC Gene BVV0102_350712 - 1 EMBV3_27091 GK000006.2:71917432-72122498 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209358 1 XLOC_127869 NonCoding TCONS_00209358 XLOC_127869 NonCoding NonCoding - 6:72026351-72027693 - TSS156865 1342 2 TCONS_00209358_1 75 1 0 0.000111522176719711 0.000599012390489461 0 0 0 2.66546471824035e-06 0 0 0 0 0 0 0 0 0 0 0 0 0.000122899643047632 0 0 0 0 0 0 0.000377997876416281 0 0 0 0 0 noncoding 0 0 0 0 0.0388488348750722 0.798552214024756 0.00244575026779496 0.977468039982994 GGGAGAGGGCAGGGCCTGCAAGCAGCCTGCAAAGGTGACCAGGATACCAGGAGCTGATGGAGTGAACTCAGATGAAAAGAAAGTACGTAGGAGGGGTCGCAGAATGTCTCCTTGCCAGTGAAGCAGCTCCTCGAGCAAGGGCGCTGAAGGCCCTGGAGTGGGACTCGTGAATCTGCTTCTGAACAAAATCCCAAGCTGATTCCAAGGCAGGTGGTGCCCTGAGCCACATTTTGACTGATGAGACTGATGTTTTATAGGACAGACCTGTGTGTCCTGTGGACATAGGAAAATACATTTTTCAATCTTCAAATGTTTTGGTAAGCTCTTCCAGGTCACTGTATCTTCTTCTCAGGCACAATGGCAGGGAAAGAAAGAAGGGAAAGAAGGAAGAAAGAGTACCTCTGTGGGGCAGGGAGTCCTGTCCTAATGGGGTCGCGTGCCAGCCATCCGAGAGAGCGGAACTCCGTGCTTGAACTCAACCAGAGTCGACTATGGAAACTTTTGTGGGCAGAGTGTTTGCACGCCTGCCAGCTCACACACTCCCACGCAGATCTGCCCTTGGTCTTGCTGACTGTGAATCTGTGAAATGAAGATTAGTGGTACAGGGACTGATCTTCTGCCTTAGGGTCTTGTCCTTACATTATTACTAAGCCTGCCCCATGAGTTGTGATCTCTGTGTTCCTGAAACTGGGGTCTGACTAATTGTTAGGAATCCTAACATTTTTCCTTTGGAGTTTTGTTTTCATGATCATCTGAAGCAAAAGTTTTACAAGTTATAAAAATAACACTTTTCTTTTGGAGTAATGATTCTCATTTGAAAGTTTTCTTCCACAGAATCAAACTTGACTTTTTTTTAAAGTCAGTGTTTCTCCAGTGATGGTCTCCAGAAATATTAGGAGACCTTCAAATACATTCTCTGGGATCTATATGAATGGCCTTTTCTTTTTTCCATTAAAAGTGAAAACTACCATTTTTGAGAGTTGCAATGGAACAGTAGTTTTAAATATAGGATCTAGAAATGAAATTTTCCTTGGCTTATAATGACGTTAGGTGGAAAATCTCCAAGGTTGAAATACATCATGTGCCAATTCATTTGAATTCAGTTCAATTCAACAACTATTTATTAAGCTGTGGTCCTAATGCTATGGTCGGCACAAGGGAATAGAGTGCACTGAAGTTCCTGATGTACTTGGAAGAGAATTATTGTCCAAGAAGCAATGGGAACATTCTCTCTGGAGGAATCAGGAAGAGCTTCTTAGAAGGATGAATTCACCATTATGACTTGCAAAGAGGGAAAAAGAAAGGGGAAGAGAAAGAGAAAGGTAGACTGAATATGACAGAT TCONS_00203522 TCONS_00203523 TCONS_00203524 TCONS_00203525 TCONS_00203527 TCONS_00203528 TCONS_00203529 TCONS_00203530 TCONS_00203531 TCONS_00203532 . 3' 108187 TCONS_00203522 TCONS_00203523 TCONS_00203524 TCONS_00203525 TCONS_00203527 TCONS_00203528 TCONS_00203529 TCONS_00203530 TCONS_00203531 TCONS_00203532 . 3' 109528 EMBV3_35265 GAACTTCTCTTGGAGGAATGAATGTAACCAGTGTAAGGCCCCTAAACCAGATGGCCCAGG Gene GeneID:280796|FUS:NM_173912:206_cdna Constitutive 2 NULL GeneID:280796 25 GENE FUS MGC139714 fused in sarcoma EMBV3_39147 CACATGGCAGCTAAAAAACTTGAAACAACTTCAGTCTGCATTCATGTCCAGATGTGCAAC Gene BVT0102_124167 - 1 EMBV3_03996 GK000030.2:7827529-7830536 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10375 TGTGTGAAGGATAGTTGTCCAGGGACACCCTGAAGAGGCTGAGGAAGGGCACATCCCCTT Gene GeneID:100336649|LOC100336649:XM_002699413:65_cdna Constitutive 0 NULL GeneID:100336649 29 GENE LOC100336649 NULL phosphatidylserine synthase 2-like EMBV3_04820 GCTTTCAAAGTCTTCGACCGTGATGGCAATGGCTTCATCTCCAAGCAGGAGCTGGGCACA Gene GeneID:616078|CABP7:XM_002707702:181_cdna Constitutive 0 NULL GeneID:616078 17 GENE CABP7 NULL calcium binding protein 7 EMBV3_27372 AAGAGGACCTGGAGATTGAGGGGAAGGGAGAGAGCAAACAAAGGGGTCAGGAGGGAAAAT Gene BVT0102_092040 + 0 NULL GK000013.2:62675888-62700410 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19910 CAGGCCCTTCCTGTTGGGCTGGACTGTACATATGTTAATAGTGCAAACCTGACGCCACAT Gene GeneID:782887|SETD1A:XM_002698069:51_cdna Constitutive 0 NULL GeneID:782887 25 GENE SETD1A NULL SET domain containing 1A EMBV3_40594 ACCACATCACCTCTCCCCACACGACATCTTACTCTGGTGATAACATGGCAGCTACCTTCT Gene GeneID:527199|INO80D:XM_002685534:112_cdna Constitutive 0 NULL GeneID:527199 2 GENE INO80D NULL INO80 complex subunit D EMBV3_01244 CAGAACTGCCCAGGGTCTGAATTCCCATAAAGGGAGGAGGAATTTACTTCTTTTAAATAA Gene BVT0102_261152 + 0 NULL GK000010.2:47086376-47303135 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09792 ACCCACCGGCCGAGGAAGAGCTCTCACAAGGTGCTGATGGACTGGATCAACGCCGAGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43114 TGCCCTGGAATAGATGGGTACTCAAGATTTGGGAATTCACTCACAGGGCTAGGCTTGAGC Gene BVV0102_140748 + 1 EMBV3_12267 GK000014.2:45128998-45279166 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056354 1 XLOC_034157 NonCoding TCONS_00056354 XLOC_034157 NonCoding NonCoding - 14:45133301-45133824 - TSS42031 523 1 TCONS_00056354_1 79 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.48621388045309e-06 0.00102534623692175 0 0 0 0 0 0 0 0 0 0.000416711891645358 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0355586025138384 0.762136493658816 0.0206456050469025 0.685635888930336 GGCAAGCTGCAGATAGGTGGAGGGAGAGGAAAATACAAAGGGGTTGAGGATTCCTCACCCACATTGGTACCTACACAAGATATTTCTCCCATACTCAGTATTACTTTTCAGTCAAAAGTGAGGTCTGGATTAAAATCATCATTTCCAGTGTGCTGAGCTTTGACTCTGGCACACTGACCCCCCTCTCCCCTGGAGCACAGCTGCCTAGCCCCTAGGGAAAGGGCCTTTTCCAAGGCAGGGGTTTGGAGGAGGGGTGATGGGAGTGTTGTTCTTTTATAACTCGTGGCTCCGGCAGTACCAGCCTCTTCCAGGTTGCATGCAGGCTCATTCCTTGCCTAGTCTGAGTCTGGGTTTAGTTAGTTATTTGTGTCCTGCAGGTTGCCTTTCTCTGTGTTTTCTTGGGAAGAGATGCCCTGGAATAGATGGGTACTCAAGATTTGGGAATTCACTCACAGGGCTAGGCTTGAGCCAGGCTTCTTCAGAGATGAACTCCTGAGACCTCCAGAGGAAAAGAGCTCAGCCT TCONS_00053422 . 5' 4157 TCONS_00053422 . 5' 4157 EMBV3_17775 TAAGAAGCCAACACGATGCCCACACCCAAAGCCGTCAACGCTCAGCAGAGGAAGAGAATT Gene BVV0102_091662 + 0 NULL GK000026.2:51200928-51323977 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37049 TCTGGACCCTTTTGAGAATTGTCTTCCTACATCAGGGCACCTGCTACCGTGGAGGGTCTT Gene GeneID:523809|UBASH3B:XM_002693034:290_cdna Constitutive 1 NULL GeneID:523809 15 GENE UBASH3B NULL similar to Ubiquitin associated and SH3 domain-containing protein B (Suppressor of T-cell receptor signaling 1) (STS-1) (Cbl-interacting protein p70) EMBV3_20318 ACTACAGATTTCCCCCATAGGTCCTCATCAATCTAGTCCCCAAGTGTTTGCCTGTGTGGG Gene GeneID:616942|LOC616942:XR_082720:249_cdna Constitutive 0 NULL GeneID:616942 23 GENE LOC616942 NULL MHC class I heavy chain EMBV3_27688 TCCAGGGCTGTAGGATGGTGGTCTCGGCAGAAAAAGAGTTCACAGAATATGCCCGGAAAG Variant GeneID:511479|MRPL45:NM_001035100:94_cdna 84^174 2 EMBV3_33043 GeneID:511479 19 GENE MRPL45 MGC127097 mitochondrial ribosomal protein L45 EMBV3_28820 AGGTTGAAGTTCCGACTAATACCTGGCTTCTCAACAAGTGTGGAGGGCGTGTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_17591 TGACTCACTTCACGTAGTCTGGTCGTCTCTAGGTCCATCCATGTTGCTGGAAATGGTGCT Gene BVT0102_056551 - 1 EMBV3_02454 GK000022.2:8161092-9039758 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129796 1 XLOC_078509 NonCoding TCONS_00129796 XLOC_078509 NonCoding NonCoding - 22:8359265-8359806 - TSS96663 541 1 TCONS_00129796_1 45 0.491682070240296 1 0 0 0 0 0 0 0 0 3.64431488227123e-06 0 0 0 0 0 0 0 0 0.000460321257812009 0 0 0 0 0 0 0 0 0 0 3.55089636989469e-05 0 0.000266716683411902 XR_238040.1 LOC101907673 PREDICTED: Bos taurus uncharacterized LOC101907673 (LOC101907673), 3e-35 152 73.63 0.482439926062847 XM_005249968.1 AOC1 PREDICTED: Homo sapiens amine oxidase, copper containing 1 (AOC1), 2e-07 60.8 72.22 0.197781885397412 0 noncoding 0 0 0 0 -0.0195876885815429 0.880745153716104 -0.00798131730115303 0.864540287102707 TATATAGTAGGTCTTTATTAGTTTTATTTTCTTATATAAAGTGATATGTGTATGTCAGTCCCTATCTCCCAATTTATCCTCCCCCCCTTTCCCCCGGTAGCCATAAAATTGTTTTCTACAATCTATTACTGTTTTGTAGATAAGTTCCTTTGTACCGTTTCTTTAGATTCCTCATATAAGTGATATCAAGTGATACTTGTCCTTCCCTCTCTGACTCACTTCACGTAGTCTGGTCGTCTCTAGGTCCATCCATGTTGCTGGAAATGGTGCTGCCTTTTTAGGTTACGTGGTTGCTCCCTGTCACCACGTTTTGCAGTGCTTCTGTTTGTATAACAGAGGGCAACTGAAGGTTGATAGGTTGACCAGATAGCCACAGCTGTCACAGCTTCAGTCTGTCAGTGTATGTGAAATTGAATCCCTAAACCACTCTTTGCAAGAAAAAAAAAGTGCCTGAGAACTTTCCTGAGCTCAGAGGTGTGTCCCCAGTGACAGGCTCTGAGGACAAAGGTGTAGACAAAGTTTAAGCAGCTGGGGTGTGGTG TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 195315 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 195855 EMBV3_21627 GTTACAAAGTTATTTTGAATATGGGTGCAGTGGAGCGCCGAGCTGTGGCACAAACACGCC Gene BVT0102_304523 + 0 NULL GK000021.2:68696043-68706702 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120172 TCONS_00120175 TCONS_00120174 TCONS_00120176 1 XLOC_073104 Coding TCONS_00120176 XLOC_073104 Coding Coding WDR20 21:68639643-68705610 j TSS89826 1901 1 TCONS_00120176_1 161 3 0.97122760209805 0.00375800508155178 0.00122712036592802 0.00186084901432311 0.00104390782154484 0.000980367579549068 0.000702273757520624 0.00111707147853128 0.000555801378418184 0.00201895076704751 0.000213139970101526 0.000450937459154539 5.55396995310363e-08 0.000518564501272431 0.000719673378783615 1.9418207626402e-05 0.000377420999235633 1.03620152701943e-05 1.77887486966849e-05 0.00174332928895293 0.00113606717886459 5.5838981282963e-06 6.30511169417245e-05 0.000165123036152032 5.54446220227232e-08 0.000338859826689541 0.000532700220675579 0.00158267667760911 0.000104492211933598 2.46413180773689e-05 7.36847622917521e-05 NM_001191156.1 WDR20 Bos taurus WD repeat domain 20 (WDR20), mRNA. 0.0 801 100.00 0.233035244608101 NM_181291.2 WDR20 Homo sapiens WD repeat domain 20 (WDR20), transcript variant 1, 0.0 776 97.60 0.240399789584429 TCONS_00120176_1 sp|Q8TBZ3|WDR20_HUMAN WDR20_HUMAN WD repeat-containing protein 20; 4e-99 301 99.31 0.888198757763975 0 coding 1 1 0 0 0.170679562113938 0.567455795471621 -0.146675158531122 0.0184506740275118 GGGCAGGATGAACGCTGCTTTCCAAGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCTTTCAACTCGCAGGGCTCTAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGCCGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAGGCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCTACTTGCCATGACGTCAACCACCTAACAGCCACCGCGGAAAGCGTCTCCCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTATTTAATGAGGAAGGTTCACTGTCAGCCCCCAGCCAGGCCACGCCTCCAGGTGGAACTGCAGTGTAGCGGCCCAAGCCTGCTCGGGCGTCCTTGTCCCGGCCGCGTCTCGAGGGAGCAGCCGCAGCGCAGCGCCAGCCGCGTGGGACCTTTAGCAACGCCGCGTGGAGGGCAGGCCGCGAGGAGCTCGGCACGGCGCACCCCAACAAGCTGTTTCCAGTTTTAAACCGTTCTTTTGGGCTGCAGTAAAAAATGAGAAATGAGGTTTTCTTGCTTTTTACTCTTAAAATTCAATGTCATGTTTTATATATATATATATAATTATACATATATACATAGTGTAAAATAAAAATGTTTCTTGGACAAGAAATCCCCTTAAATCCAACTGTTTATATAGTACTTCCCTGCTTCTGCACTATTTTTAATACTTTAGGTGGTCAGGAGACAACCTGGAATGCACTCATAAAAGTTGTTAAAGTTATTTCTTGTAATTCAGGAAGACAAATGCTGCAATCAGATTTTTTAAGATTATTTGCACTTAAAATAGCTTAATGCAGTTACAAAGTTATTTTGAATATGGGTGCAGTGGAGCGCCGAGCTGTGGCACAAACACGCCCTTTTTTAATCTGTTAACATTTATTTTAATACTCTCGTTCCAATGCAGTCAGCTCTGTATTATATGTATAAATAATGTAAGTCTGCAGTTGCGGAAAGGGTCACTTCAGTAAGTAATTTTCATCATTTAAGAGTGATATTTCTAATTCACACAAAGTTAATATTAAAGCTGTCTTGAATATACCACTCGTCTGTCTTCTGTTAAACTGGCTCTGGCTTCACTGCAGTTTTGTTTTTGAGGTGCTCAGGCCGTGTCCCTCGAGGCCCTCCAGCAGTCGAGATCGATTTCAGGCAGCTCTGGGGAGCCGGCTGCTTCTCTGGCCACTTCCTGCCACGTCCCCATCTTCGGCCGTGGCACGTGGGTGCCGACTCCGGTCTCAACAAACCATTTTCTCCTTACAGCTTAAAGCCCACGAGCCCACCTTTTGTCGCCGAGAGATCTCACCCGCGACTCTCTCTACGGTTGTGTGTGAAAATGCTTTGTTCCCCGTGCGGCAAAAAGGCTAATGAGATGACTCGGGACTTTGGTTGTAACCAGCTGGTGAGCAGCTCTGAGCGTAGGTCAGGCCCACACCTGCGTTCAGACTCTACAGGTGACTACAGTAATAACAGTGTGCAGCTGCCAAGCAGAGACCTTTTGGTCAAATCAGTTGAGCCCTCTGAAGGCCTTTGTTCAGTCAGGCTCTAAACCATGGTGCCTAAAACACATTTCTCAGAGATCCCAGTAAACCGGGGGCACGTCCAAGTGATGTTAGTCTAGAAAAGATGTGAACACACTCTACTCACTCCCCTGCCATCATCTACGTGAACGTCCCCACAGGATCACGCTGCTGGTTGCAGGAA EMBV3_40129 TCACCTTTCACAACCAGGAGCTCTGCAGGCCCAACTGCTCACCCCAGGGTATTTTGAAAT Gene GeneID:514524|LRRC45:XM_002696135:267_cdna Constitutive 0 NULL GeneID:514524 19 GENE LRRC45 NULL leucine rich repeat containing 45 EMBV3_06794 GTCAAACAGGCCATGTTCAACTATTTCCAGGCGCTCAGCAGGGAGACCCCCTTTCCCGTT Variant GeneID:508132|NAGK:NM_001034314:8_cdna 629^716 4 EMBV3_26848 GeneID:508132 11 GENE NAGK MGC127109 N-acetylglucosamine kinase EMBV3_21554 GAGAAGAAGGGACTGACCATGCGTTTCAACATACCAACTGGGACCAATTTACCCCCTGTC Gene GeneID:514473|ATRX:XM_002699982:65_cdna UTR3_Alt 4 NULL GeneID:514473 X GENE ATRX NULL alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) EMBV3_40497 GGAACCCTGTTCTACTGCAAAACACTGGAAAAAGAGACTGAGAAAAAGCAATGTACTGTA Gene GeneID:529416|FLRT3:XM_002692042:5_cdna Constitutive 2 NULL GeneID:529416 13 GENE FLRT3 NULL fibronectin leucine rich transmembrane protein 3 EMBV3_30953 AGCTGCGGCCAAGTCAGGAAAGAGCGACAGAGACATCTAAAAGCACAAGACAGGCCAGTA Gene GeneID:505147|PCGF2:NM_001144106:56_cdna UTR3_Alt 2 NULL GeneID:505147 19 GENE PCGF2 ZNF144 polycomb group ring finger 2 EMBV3_12715 CACACATATGACCGCTCCATCATGGTGGACGGAGATGCATATGTCATTGTGTACTCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26739 GCTGCAGGGAGCTCAGATCAAATAGGAAAATACTTGAAATGCATGTCTCAAACTGTGAGG Gene GeneID:100138312|ACSL3:XM_002685630:313_cdna Constitutive 2 NULL GeneID:100138312 2 GENE ACSL3 NULL acyl-CoA synthetase long-chain family member 3 EMBV3_10567 TCTCCTCTTGCAAAGACCCGTACATCACAGGTGTATTACCTGACTGCTTAACAGATGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34343 CTGAGCAAGGAATATAGTATGTATGGCTGGTGGGTCGGAGAACTGAACAGCCTCATTGGG Gene GeneID:506769|SKAP1:XM_002695944:375_cdna Constitutive 0 NULL GeneID:506769 19 GENE SKAP1 NULL src kinase associated phosphoprotein 1 EMBV3_41590 TCAAGCAGACAAACGCAGAGAAGAAGGCGAGCGTGGTGACCCTGCCTGTCTACCTGAACT Gene GeneID:537748|LOC537748:XM_002696839:662_cdna Constitutive 0 NULL GeneID:537748 21 GENE LOC537748 NULL similar to dynein, cytoplasmic, heavy polypeptide 1 EMBV3_03507 AACCCCATTCTGAAGGAAGGTCGAGACAAAGAGTCTCCTGGCGTGAAGCGTCTGAAGGAT Gene GeneID:524109|PCDH19:XM_002699793:17_cdna Constitutive 0 NULL GeneID:524109 X GENE PCDH19 NULL protocadherin 19 EMBV3_18625 AAGTATAATGATTTATATAAATTCCAGCAGGAAAATTCTGTTTGAACATTTCCGGTCTTG Variant GeneID:514141|OGFOD1:NM_001166613:231_cdna 373^419 2 EMBV3_34256 GeneID:514141 18 GENE OGFOD1 NULL 2-oxoglutarate and iron-dependent oxygenase domain containing 1 EMBV3_12201 GCTCTCTGGCTCCCATTGCCATATAAAACTTCATAAGCCTCGACCCGAACCCACAGTGAA Gene GeneID:505329|CRISPLD2:NM_001100299:14_cdna Constitutive 2 NULL GeneID:505329 18 GENE CRISPLD2 NULL cysteine-rich secretory protein LCCL domain containing 2 EMBV3_38051 ATCTTTGGCCTGGAGTTTCTCATAGTGTCCCAGTGGCCTGCACATCAACAGCATCACCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11017 AGAAGGAAACACTGACCCTCAATTCAAGATGTTGTGGCGTGCCCTCTGCCGAGACCTAGA Gene BVV0102_245435 - 0 NULL GK000002.2:17385831-17562594 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101707 TCONS_00101705 TCONS_00101709 TCONS_00101710 TCONS_00101706 TCONS_00101708 1 XLOC_061739 NonCoding TCONS_00101707 XLOC_061739 NonCoding NonCoding - 2:17468311-17568858 - TSS75948 586 0.307167235494881 5 0.99422155033517 0.00186214619970818 0.00137302797656368 0.00236764869203878 0.000413444284843666 6.33385757865226e-28 4.75277786641481e-05 0.00020940997727815 2.43994119672877e-05 4.59054081537338e-05 8.98247018396433e-225 8.14111308363836e-05 6.19844546678238e-05 7.2531318978461e-74 9.51407158944627e-103 1.1583383627845e-45 8.25721373008535e-10 2.05861344310117e-07 0 0.00184370649808732 3.00600692395761e-53 0.000518893978728526 0.000544520618684287 9.87874078275187e-10 3.62746302023731e-05 0.00475566429868776 0.000849203683294963 0.000942866072071942 0 0 0.000506546145433412 XR_230268.1 LOC101906250 PREDICTED: Bos taurus uncharacterized LOC101906250 (LOC101906250), 2e-145 518 100.00 0.488054607508532 NR_103764.1 LOC100507506 Homo sapiens uncharacterized LOC100507506 (LOC100507506), 7e-13 78.8 74.80 0.21160409556314 0 noncoding 1 0 1 1 -0.150557977751148 0.214818830786361 0.040653814291367 0.489448573131067 GTTCTCGCGGGACTAGCAGAGTTCTCGCGGGGCCAGCAGAGTTCTCGTGAGGTGACGGAGCTCTCGAGAAACAGGCACAGCTGTGCAGTTGGGTCTAGGTCTCGGCAGAGGGCACGCCACAACATCTTGAATTGAGGGTCAGTGTTTCCTTCTGCATGGTCTGAAATACCTACCGTGGCTGTTTTGATGAACAAGGTATAAGTCACTCTTTGGAGCCATAAGAGAAGAACTACTTCTAGAAGTTACAAATATCGCACACACACTTAGGTCAACCTCATCTGGTGAGTTGAAGGCCTTAATAGAACAAAGACTGACCTCCCTCACCAAGAAGGAATTCTGTCAAAACACTGCCTTTGGACTCAGATTGCAGCTTTTTCCTGGCCTCCAGCCTGCCAGATTAAAGATATGGGACTTACCAAAGACCAAAAGCCTCCACAATCATATGTCCTTATGGAGGGATCTTGTTTTTGTTTCAACCCATTAAGTGGATTCGCTACAAAATAACCTCAAACGATCTGGGTGTTCTGTGCATAAGGAATCATGTTTACATCCCAAGCGCCAGACTGCCTTTCAGCATGATGATGCC TCONS_00101684 TCONS_00101685 TCONS_00101686 TCONS_00101687 TCONS_00101694 TCONS_00101696 TCONS_00101698 TCONS_00101699 TCONS_00101700 s 3' 18442 TCONS_00101684 TCONS_00101685 TCONS_00101686 TCONS_00101687 TCONS_00101694 TCONS_00101696 TCONS_00101698 TCONS_00101699 TCONS_00101700 s 3' 18442 EMBV3_19657 GTTGCAACTTGCCTGCTCAGGAATCTAATTCTTGTTTCCAGAATGCAGAGAGAACCTCCT Gene GeneID:785330|LOC785330:XM_002686235:251_cdna Constitutive 0 NULL GeneID:785330 3 GENE LOC785330 NULL hypothetical LOC785330 EMBV3_05367 TCACCCAGGCTACGGCAAGGAGGTCGATCTATCTCCAGGCTGCTACAAGTGGATCCTGTG Variant GeneID:512670|PHKG2:NM_001046128:305_cdna 774^927 1 EMBV3_08365 GeneID:512670 25 GENE PHKG2 MGC129049 phosphorylase kinase, gamma 2 (testis) EMBV3_04206 GTTTCTGTGGGTCCAGATTTGCTGGGTGAGGGGAGTAAAGGTGGAGCAGAATCCTTCAGT Gene GeneID:100296438|LOC100296438:XM_002690601:63_cdna Constitutive 0 NULL GeneID:100296438 10 GENE LOC100296438 NULL hypothetical protein LOC100296438 EMBV3_22262 TTTATGGGAGCCACAGCCAGTTTCAGCAGCTTCACCGTGTGGGGCCTGGAATCTATCCCT Gene GeneID:505618|RNASEH2C:NM_001045921:509_cdna Constitutive 0 NULL GeneID:505618 29 GENE RNASEH2C MGC137048 ribonuclease H2, subunit C EMBV3_39704 CTCATTTGAGGCTGGATTGATGGTGTAGATCAGTCATTGGAGGTGTTGGGATGTGCACGG Gene GeneID:100140430|LOC100140430:XR_083984:398_cdna Constitutive 0 NULL GeneID:100140430 19 PSEUDO LOC100140430 NULL similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (predicted) EMBV3_18408 GACAGAGGATAAAGTGGAAAAAGACCTTCAAGGAAGTTACTGGCACAACTGGAAGCTCTG Gene GeneID:506967|ATF1:NM_001075289:44_cdna Constitutive 2 NULL GeneID:506967 5 GENE ATF1 MGC143110 activating transcription factor 1 EMBV3_02385 GAGTGTACAACATCTCATACCCACCTCACCAAGTCACAACTAATCTGTCTGCTCAAAGCT Gene BVV0102_217951 - 1 EMBV3_34550 GK000012.2:22773622-22817677 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06765 TGGACAAGGATGGCCTCATCAACAAGGACTTGACAGGCAGCGTGATGGTTTTTTCTGTGG Gene GeneID:511470|CYP1B1:XM_002691285:370_cdna Constitutive 0 NULL GeneID:511470 11 GENE CYP1B1 NULL cytochrome P450, family 1, subfamily B, polypeptide 1 EMBV3_26927 CCTCTGCAAACAGCATCTTGGCTATTTCTTCTGAAGGATTATTTGCACAGACTTAAATAC Gene GeneID:530147|BAMBI:NM_001046309:61_cdna Constitutive 2 NULL GeneID:530147 13 GENE BAMBI MGC137853 BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) EMBV3_36779 CTCCTGAAGGAAGCGCACCTGCCTGTGATCGAGAACAAGGTGTGTAATCGCAACGAGTAT Gene GeneID:280897|PLG:NM_173951:2_cdna Constitutive 0 NULL GeneID:280897 9 GENE PLG LPA plasminogen EMBV3_39381 ATTCGGAAGTGTCAGGAGGCAGCTCGCCAGAAAGTGGTTTCTGGAGAAGTTAAAGCCTGA Variant GeneID:613653|ITPA:NM_001076282:1270_cdna 204^277 5 EMBV3_04423 GeneID:613653 13 GENE ITPA MGC137583 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) EMBV3_23943 CCAATATTGCCAAATCTTCTTCAAACACTCCTGCCAAGGGCCACATGCCCTTCTGGCCTT Gene BVT0102_107044 - 0 NULL GK000002.2:72429759-72523470 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17278 TCTCACAAGACTTTCAGGATCAAGCGATTCCTGGCCAAGAAACAAAAGCAGAATCGTCCC Gene GeneID:100295254|LOC100295254:XM_002692666:20_cdna Constitutive 0 NULL GeneID:100295254 14 GENE LOC100295254 NULL similar to ribosomal protein L39 EMBV3_13770 GATTCTATTTATGAACAATGTTATTTCAAACCATCCAGTGTTATGCTAGAAGAGGACCAT Variant GeneID:539598|ZCCHC8:XM_002694484:337_cdna 318^423 3 EMBV3_28869 GeneID:539598 17 GENE ZCCHC8 NULL zinc finger, CCHC domain containing 8 EMBV3_37326 TTGGGGCAACTAAGCCTGTGTAGCGCAACTACTGAACCTGTGCTCTGCAACAAGAGAAGC Gene BVV0102_087083 + 0 NULL GK000023.2:20474990-20596881 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16736 TGCTACAATGTGGATAATTCTCGAGGCATTATGCTATGTGAAATAAATCAGACAGAGAAG Gene BVT0102_189938 + 1 EMBV3_26319 GK000021.2:785274-826953 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118474 TCONS_00120343 TCONS_00120342 TCONS_00120344 2 XLOC_072632 XLOC_073142 Coding TCONS_00118474 XLOC_072632 NonCoding NonCoding - 21:821352-826984 - TSS88940 5632 7 TCONS_00118474_6 47 0.160333806818182 1 0 0 0 0 0 0 5.08067333574493e-06 0 0 0 3.20270094580304e-11 2.64194346122871e-05 1.17112271351772e-05 1.13324447666584e-12 7.91546940729216e-16 0 1.8093728444943e-17 0.00036023749839083 0.000334677506052679 0 0 0 3.83998363429047e-09 8.98059062952058e-05 0.000262182321782645 0 0 0 2.04727064671558e-10 6.82430008571532e-05 6.19092529288674e-05 XM_005199583.1 MKRN3 PREDICTED: Bos taurus makorin ring finger protein 3 (MKRN3), mRNA. 1e-116 426 100.00 0.0417258522727273 0 noncoding 0 0 0 0 -0.237660135805969 0.179872459640384 -0.00899712457040148 0.858040495271683 AATTTTCACAAATAAACCATATTTCAATAAATCATTTAATCATTTGTATGAAAATGTATGTGTGTACACAGTATCATGATTATACTTTGGCATAAATTATGCATCATACAATGGAATATCATATAGCCATAAACAGTAAATAAATCCTACATTTGCTACAATGTGGATAATTCTCGAGGCATTATGCTATGTGAAATAAATCAGACAGAGAAGACAAATGCTATACCATTTATAGCTGGAATCTAAAAAAAAATGAACTCAGAGAAACAGGGAGCAGATCAGTGGCTGCCAGGGTAGCGGAGTAAAATGGGGGAAATAGGTGAAGGTGGTCAGAGTACACATTTCCAGTTATAAGACAGGTTCCAGGGATTTAATGTACGGCATGGTGACTAGTTAATAATTGAGGTACTGTATATTGTAAAGTCACTGAAACAGTAGATTTAAAAAGTTCTCATCACATACACACACAAATTGTTAACTATGTGAGGGGTGCCACATATACATATATCAAATCATATATTTCACATCTTAAACCTACACAATTTTGTCAATTGTATCTAAGAAAAGCTGAAAAAAATAACAGAACAAAATAAAACCACATAAGAGGTCCTAATTTCCATTTTCCATTTGATAATGGTTTCCAAATTATGTAAAATAGTACTGAAATACTTGTTCTTTAAAGGTTTTATGAAAATCACTATTTTTTTTTTTGTAAAACTGCATTCTGTGAAATAATTTACTCATATTAAATATTAGGTTATATTTTGTGTAGTCAATGTGTAATTAATTACATGAGCCTAAAATTTATCAACTTCTTTCAAGTTCTGCAATTAATTGGTATCTGTTTGAGTAATGTTATTTCGTATGTTTAATAGAACTTCTCTTTGTGGTGAATTCCTATGAATTGAGTGTGTGTCCAACTCCATATTTGCATTTTGTTGCTGTTTTTTCCCTCATTTTCTTAAGTTAGATAATGGTGTACCTATTTTACATATTTTTAAATAAATCGAATCAATCATAATATTTAATATATTAATTTCTTCCATTATTTAATATTTTTAACTCATTTGCTTCCTTAGTCATGTGTTTTGTGACTGTGCATTAAAAATCTTATAGATGTATACTATATACATGTACACATATACATATATAGATAACACATCTCACACATTTATATAAAATTATATAGAACTTGAATTTAGTGTTTTTCCAGATATAAGATGTCCAAATAATTATGTATTTTGCTACATTAAGATCAAACATTTTTTAATATTCTACCATCCTTTTCTTTTTTTTTTTGGAAAATAACCTATTCTTTCCTGATGTACTCTTCTTCTGCTGTGCTAGTTTTGCTTGTTTGTCAGTTTTTCATTTGAGATTATTTTGGCATCAATATTCACAAATGAAAATGAGACTGGGCTCTAGTTAACTCTGTGTTATACTATATTAGAAACATTCTGATATCAATGTTAGGTGTCACTCACAAGCTAACTAAATCTTTTTCTTCTCTTCTTTGGAGTGGTGTATATAACATTGCAATCTATTTAAAGGTTTTCGTAAATTTCTGGGACAAATGTCTTTTGGGGCAGTCCAGGGCATAAGTACATTCCTGAAATTTTAACTTTTCATTAGTAATTGTTCTGGTTTGATTTGTTTCTTAGATTGATGTTTGGAAAATCACGCTGAAAATTTTAAAGTCCTATCACATTCCCAGGTGAATCTGTCTTGGTGTAACAAGGGTTTATTTCCTATTTCTTTGGTGTATGCTTTTCTCTGAGTATGTCCTATTCATAGTTTCCTATTTTGTTTAATTGCACTTCCTCCTTTATTTTTTTTTATTACATTAATGGTTTATCTGTTTATTGATTTTTCTTAAATAAAAAAAAAACCAGCTTATATATTTGCATTTTATTTTTTTGCTTTAATCATTCTTAATTCCTTCTGCTTACCAGTGTGTGTGTGTGCATCTGAATGTTGTAGTTTCCTTAAAACTTACAGATCTGGATACCTAATCAATTATGTAAACTGTATTTCTAGACATTTTATATTAGTATTTAACATTATTTTTACTCTGAGTGCAGATTCAGCACTATTCCATAGATTATAGTATGCATACATTTTCATTATCTTATTCTGCCATTCTAGATGACTTTGAATTTATTCTTTCATCAAATTATTTTTGAGAGAGGTATTTTAAAAATCTCTATATAGTAGTGGTTTCAGAGTAGCCAGTGGTACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGAAGCCTGGTAGGCTGCAGTCCAGGGGGTCGCTAAGAGTTGGACATGACTGAAGTGACTTAGCAGAAGCAGCAGAAGTAGTGGTTTATTTTCTTGTCTTGAATCAGAGACCATTGCCTGTACGACTAATTTTTCAATTTAATTGACAGTTTCATTGTGATCTAATACATAGCCAGTTATTTTTGTTAGTGATCAACTCTAGAAAATGTGATATGCAATATTTTTCATGGCAAAAATTCTAACATGTGTTAATTTATTTCTTTTTACCAGTTTTGGGTTATTTTCCAAGTACCCCTTTTTTCATCCCCACCTCAACTTCATTTGACACTTAGGTTGTAGTTCAGCATTTGCTGTGGAAACAGAAATCACACCCCTGAGATATTTGCAAAAGTGAAAAATGGAACACCTATAGGTATCACATATGAATTAGAAATCTTTCCCTTTAAGTCACTGAGTATGAGATACATTTTTAGCATATTCATTTCATTAAGTCTTTACATCCACCAAACTTAAACAAATGGAGCATAAGAAAATCAGATCTGCTTCACCCAGGCATTCTTTGTGTGGTCAGAATGACACTCTGTATGCTACAAGCCCCAGAGGCTGAATCCATGAATCTCCTGGAGGAGGGAACAGCATACACTCTGAATCACTCACAGAGCAAACCTTTGTATGGCAAAGGGCTCCTTTGTTCCTAACTGCAGCAGGGGTGGTTCATTTGTCCTTATGGGCAGACCCTCAGGACACTTCACCCAGCTTCAGTCCTGGTGATATCCCTGTTATTTGATCTCTTCCTGAATGAGCTGATGAGGAACAGGGAATCTCATTAAAAAAAAAATCTTATTTCTTATTTTCCTCATGTAGGTATCAGTCAGAAATAACATAATTTTTGTTATATTTTTAGGAATTGACTAGCACATTTTTGGTTTCAACTGAGTGACATTTGCTAAAAATATTATTTGGTCTTTTTGAAATTATGAATATAAAGTTAATGTACCATTTTTCTAAGAAAATCATTTAAAAATAATGTTACCTTAAGACAAATTCCAAAGATGATCAAAGAGAAAAACTTGGTGGTGTTTTAATTCTTGTGCAAGCTTTTCTCAGGTTCACAAGTACACAAATGTCACTTTTATACATGTTATTTTTAAAATACCACCTATGTCCTAAGCATTGTCCAGATTACACTTGACATTCACAACAATCTATAAAAATATATGGTGTTATACCCATTTTTCATATAAAGAAACTGAGGTATAGGAAGTTTAAATAACTTGCTCCTGAATGCAGGGATGGTAAGATGCAGTCGGGATTACAATCATCCTTTTTCTCCCAAACCATATTATGTTCTACAGACCCTTCTCACATGCTATATAAAGATCACTTTATATAATTATTTGGGTTTAAAATATTTGAACAAAATGTGATATTTCACAACATTAGATAGTGCATATTAGGACAAACTTTTCAAAATTTTTTTGTGCTTGGCTTAAAGTGTCCTCCTTGACAGCACAGTCACCACACAGAGCTCATGTTTTGAGCCCCTGGGGTTAGTTCAGTCTTTGAGACTGCTCCATCTGGTCCCATTCTTTGGCTGCTTGGTCATCTAAGTCCCCTTTCCCCTGAATGACTAGGACAGCCTAGAAGGTGGAAATATATTTGGATTTACATTTTAGAATCACTCACCCTAGGTGCTGGTAATAACCAGGCATCAAGGGCCTCTTGACTGAGGAATTACTTGGACAACAATGATCAAGAGGGAAGGAATATGGCAAAGACCTCAGTGAAATAGGCTGAGATATTCACCCACAAAATCAGGAATCATGTAATAAGAAAGAGGCAGTTTATGAATACAGGCAGCTCAGGCACATTCTGAGTGGTGAACTAAGAAATACTGGGTCTGCAGCCCACAGATAAAGCTCCAGAACTCCAACATTCTGTAGCTCACTTATTCTCACCTCTGTCCCACCGGGCAGTTTATGAGACTCCACACATAAATATTGCACATGTGTTTCCAGTAGCTATATTAAGTGTGTCCACCTGCTCTCAGTCATAAATGTGGGACAAGAAGCAGCATGGTGCCTATGATCTGGAAATATACTACCTGAGGTTCATTTGCTGCTGTTCCACTTATTTATGCCTACAGGTCAGAGCTATATAGGCAAGTAATTTAACATCTCTCTCTCTTATTCATCTCATCATGATGGTGATAAAAATTATAGCCAGTACCTCATAAGGTGGTTCTGAGAATTAAATTACTGTTTTGAAGAGTATAAACTCTTCAAATTTGTCCTGTCTTTGTTAAACAGTTGGGGAATTCTGCCACCCCTGTGACTCAGGTCCCCAGGATATTTTCAGCTATGTTAGGCAGGGGGATAGCTTTCTGCAGTTGATACACAGCATTTTATACATGTCAACTAGGTAAACTGTTAAAACTGTGCTATTTAACCCACATTGTTTCTTTCTTTGCTTGTTCAGTTATTGAGAAGTATTCAAATTGTTTACCAAGACTTTGTAGCTTATCAATAATTTATTTGCTTATCTAATACTATGATACTAAACAGAAAATTGGAATAGTTTATCTTCTTGGTAAATTATAATTTCATGTTTATATACTTTATGTATCTCCAGTTGTGTATTAATCTTTAATAATGAACTCTATGCTCAAAAGAGTTATAACACCTCTGATTAGTTTTTCATCCTTATAATGTTTATGTATTCTTCTACTGTATGTAGTATATAGTTAACAACATATAGTTTCATTTTCATTTTAATTATGTCTGCTAATCTTCAGATTTTAAAATACTTCCACTTAATACAGTTATGGTGTATTGGCATTATTAACTTTCCAACTTACTATCTATTCAGTTTTCATTACTTTCTATATTCCATTTATTGTCTTTCCATTATTGCATTATGACTTATTTGAAAATGTTTATTATTCTACTTTAATTTTTATAATCTTATCACTTTTATGCCAAAAATTTCTGTCAAAAGCACTTACTCTGGTATGTCTATAGATGACACAAAATACTGAATACAAAGAACTGTGTATCTGAGTCAAAGACTGTTGTTTTAAATAATAATGATACAGTGGCTAAACTGCATGGGAACTCACATAGCAGCAAGCTATTAATGGCATCACAGTAATTACCAGTGTCATATTCTGTAAATTCTTTAAGATCTGTGTCTGCTACATTTAGATAGAGCCACTGAAATAGCTGTTTTCATTAGATGCTAATCACTGAAACCTGTGAAAGGGACAGAAAAATAATTTACATACCTCACACTCACACAACAGCAATCCTATCAATCTTTCAGCTTCCAGCTCAGTATTTATTTTATTAAATAAAAA TCONS_00120345 r 3' 658 TCONS_00120345 r 3' 6289 EMBV3_05209 CCAAGATATTCACTAAAAACGTTAACCTAACTAAAGTCCAGAGCACAGTAGGCAAGTGAT Gene BVT0102_041511 - 0 NULL GK000008.2:37292780-37668582 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00230868 1 XLOC_140358 NonCoding TCONS_00230868 XLOC_140358 NonCoding NonCoding - 8:37491625-37493209 - TSS172372 1584 4 TCONS_00230868_2 52 1 0 0.000326399372402446 0.000114186705416668 0.00012268565069706 0.000131063048370681 6.23381927749664e-06 3.16154161867748e-05 0.000180400562630726 0.000186701732818903 0.0012452869879781 0 0 0 3.62283226921193e-06 0.000216787946945689 0.000988054726815298 0 0 0 0.000248990676886214 3.63202627129696e-05 4.02464141302673e-05 4.68476172531237e-07 5.79169345888865e-06 0 0.000192457732709085 0.000373623325969299 8.8774937091767e-05 0 0 0 0 noncoding 0 0 0 0 NGAGAGAGGTTCTCAAGGCAAAGACACAGAACCTGGGCAGGTAAGCACTAACAAATTAACCATCTTAGGTTAGTCAGAGTGAGTGGATATGAGAAATTCATGGGGGAATCCTGGAGTGCACATATGAGATCATGCAGAAGGAGAGTTCTAACAGGTTCTCAAGAGTCTGGAGCAAGAGGATTTCATGGTGTGCAAATGATCACTGCAGAATTGATGGGAATGCCATTTCTAATTAATTACCTTCATTCTATAGCTTGAATATAAGCTGTACATATATTAGGCTAGTAGAAACCAACTCTTATGTAAGTAAGAACTGGGAAGATGTGGGCCTAGTCCTTCCCTAAGCCATAGACATTGCTCAAGCTATGAATTGTAGAACATGTGTGTTTAGGGACTTGAAAGAAATGGAGGCTGTCCTCTGGGCATTCCACCAACACTCTTTCCCAGAAAGTTTATTAGAAGCCTTCACAGGCAGTTTTGCATATTCACAAATGTGATTTTATCCACAAATCATGACTATGCCATCTATCTAGGATAAGCTGGCCCACAGGTGGTGAATGGAAAAAACTGAAATCACAGGGCAACTATAACTAGTAAGAAAGGCAGACATTCAAGTTACCCAGGCCATGCAATGCCTACTATCCCATGATCTCATCAGTAAACCAGATAATCATCAGAGGCTCTTCTGATGAATTTCTTCTCAAAGCAAGGGATTCAGTTGTAGAATTTGATAGTTTTTCAGTTTCAAGTTGTCCTCCCCACCCCAACTCAGGTTTTGGTGGCCTTTAGAGTCTTAGTAAGGAATAGACTGACCAGAGATCCTAGACAGTGAAGTCTGAAGATCAACACCAAGATCTTCTCTGTCCATTTCTCCATCACTTGCTGTTCTTTGACTTTCCTGTCACTCATTCTCCTCCTTTCTCCCTCTTCCCTACCCCTTCTTTACCAGTTGAATTACTTATACGAAAGGACTTCCAGAAGCTTAAGCATCTTGTACACAATTTAAAGAGAATTTTTAACAGATGTCTAAGATTTCATTCCTAAGTATCCATTGTAGTTTGAAACAAGTGTACAGAATCATGCCAACATCACATTATTTTTGCATATTAATCTTCCTAGAAAGACCATATCTATTTAACTCAAAATAATTTCATATTTCTGTATTTAAATAATGGCTTTATAAAGTTTGTTTTTTTTTTTTTTAAGTTTTCCTTATGGAATCTGGCTGGAAATAGAAAGAAGGATGGTTGATGTTTATTATAAGAAGTTATGTACGATTTGATATATTACCATAGGTATTTGCTACTCTGATAAAGTAAAGTAATTCTCATTTTATCTTAATACAACTAAATGAAACTCTCATTTATCTAGATTTTTCCATTTCAATAACAAAGACGCATATGATAAAATAACCAAGATATTCACTAAAAACGTTAACCTAACTAAAGTCCAGAGCACAGTAGGCAAGTGATAAAATCTACTTCTATTGCTTAATTATCATACATGCAATGGTTTTTTGAGTTATGCATTGTTTTGAGGAAATGCAAGTTACCATTACGTATTACATATTGATGATTTTCTTTT TCONS_00227302 . 3' 175374 TCONS_00227302 . 3' 176957 EMBV3_04796 ACTAGTGACCTAAATATAAAAGTCGGTGGGCGTGCTATTGTCCGTGGAAATGAAGGCGTG Gene GeneID:535372|SGCB:NM_001102188:119_cdna UTR3_Alt 2 NULL GeneID:535372 6 GENE SGCB MGC155195 sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) EMBV3_07510 CCTCCAGCTGCTTTTCCTGATATTGGTAGAGCTTTTTTGTTGGCTGCGCCTCATGGTATG Gene BVT0102_161888 + 0 NULL GK000029.2:43051538-43111545 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163791 1 XLOC_100030 NonCoding TCONS_00163791 XLOC_100030 NonCoding NonCoding - 29:43107515-43109285 - TSS122700 1677 3 TCONS_00163791_2 60 0.277280858676208 2 0.0531373657433578 6.49048416569728e-05 0.000311578754915247 7.17363319924018e-05 0 0.000191362887017921 4.69262049605352e-05 0.000107801463550459 0 6.58687825171965e-05 0 2.73009641913039e-06 0 0 0 9.65444425901338e-05 3.14986188662469e-05 0 0 0 0.000381656149128703 0 0 0 3.99870947391361e-05 0.000165258831453818 0.000201659668935449 0.000146740820173269 0 0 0.000580789327410059 XM_005203249.1 NIPAL3 PREDICTED: Bos taurus NIPA-like domain containing 3 (NIPAL3), 1e-08 66.2 73.04 0.0661896243291592 0 noncoding 0 0 0 0 0.0426744403219361 0.703915240085372 0.0442082739453957 0.415945685910689 GAGTTCTGAGCCAAGCCCTGCCCCGCCCCTCTCCTCGCTCCCAGGCCTAGCTTCCTGTCCTCCAGCTGCTTTTCCTGATATTGGTAGAGCTTTTTTGTTGGCTGCGCCTCATGGTATGTGGTATCTTAGGTTTGCAACCAGGGATGAAACCAACTTGAGCTGCGGTGAAAGTGTGGTGTCTTAACCCCAGCACCACCAGGATTTACAGCCTCAGCGTTGACTCCAGATTCAGCCCTTGCCATCTTGCTCCCCACCTTGAGAGCAGCAGCACCAAAAATAGCAGCATGAGTCACTGAAGCATCGGGCATCGTCGTCAAGGGCCAGGACGCCTGCTGCGGTGGAGCTTCTGCTTGATTTCCAGGGACCTGGGGAAGGGAACCCTGGCCAGCTGGCCCCCATCACTGCCTCCTGGACCCTGGGGGAGAGCTGAGTTCACTAAGAAATTTGAAGCCTGAACTGGTGGAAATGTTAATGTTCAGAATGGCTTTACCATGACACTGCATAAGGACCTCAGGGTCCCTCATTTGCACCCCTTCTAAAGTTCTATACTTTTTTTTTTTTACACTGTATTTTATTTTTCTTTTCTGAAAGAGGGCTCTCAAAGTTTTATGTTTCAGGTCTGAGAAAACAAGCATGGGTTAATTTTGTTTAATTCTTATTGTGACCTTGGGAAACCATTGGCTTGTCTTCTCTATTTACAGACAAAGGATACGAGAGCAGAGAAAAGCCTTCCTTGGGTTCCTGGAAAATTCCAGGTTTGTTTCAGCCTCAGGGCCTTTGCAGTTCCTATTGCCCTGTCTTGAACTCTGTCCCTGGCTTGGGGCTTTTACTAAGCAGCAACTGCTGGGCCCTCCTTCCCTGCCTCCCTGGTAACTACTCTTTATCTTTACTTTTTGTTTTCTTTATGTAGCATTCACCACTCCAGAATTATCTTCATTTGTGCATCTACTTCTTTAACAAATGCTTATGGTACATATTCTGCCATCAGGCACTGTTGTCAGCTTTATAAATATGAAATCATTCAGTCCTCACTACTCTGACACTGAAACTTGTCCATCCACACTTTAAAATGAAAGCAACTGAAGCATGGAGAGGTTAAGCAGATTGCCAAAAGTCACACAGCTGGTGAGTTACAGTACCACCTGTCTCCCCCACTGGAAGACAAGGTTCACCTGTGCAGAGCCTGTAGCTGAGGCCTGCCCTGCTCACTCAAGAGCCCCTGTACCCAGAGCAGTGTGCCACACATACAATCGTACAAACAGGATATGAGACAGCAAAGGCCAGGTCACAGAGAAGGAGGGACGGGAGAGAAGCCTGGAGAGAGGCTGTGGGGGAGATGATGGAAGGCCTCGAAGGGCCTCAAGCGCTGAAGGACGAGCCGGGCTGGGGGGCAGCATTGGGACCGGCAGGAGTGTGGTGGTCTGGGCACCGTGCCAAGAAAGGCAGGATCTTGTTGACAGATTTAACTTAGCAGGTAGGCGGGCAAACGCCTTGGAGTTAACCTCCTTCCTTCATGCCCTGCATCCATTACATGAACAGACCCTGTCAGCACCTCCAAAATGCATTCCTAATCCCACTTTTCTCACCCAAATTCTGCTCCCACCTGGCCCACAGCTCCATCACAGCTTTCCTGGAATCCTGCCACGGCCAACTAGGAGGTCCCCTGGGCTTTCAGCC TCONS_00163792 s 5' 2192 TCONS_00163792 s 5' 3961 EMBV3_08647 TTAAAGGGAGAACGAGAGAGGAAAGGATTCTGTTGTGTTCTGTGCTAGTCTGGGGGCCAC Gene GeneID:533096|ENTPD5:XM_002691004:319_cdna Constitutive 0 NULL GeneID:533096 10 GENE ENTPD5 NULL ectonucleoside triphosphate diphosphohydrolase 5 EMBV3_12653 CATGACAAACACCTTCCAACAACACAGGAGAAGACTCTACACATTGACATCACCAGATGC Gene BVV0102_204745 + 0 NULL GK000020.2:7740418-7894881 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16330 CAGAGTCTCCAAATAAGACCTTGGTACCTGTATGATCCCATCTAATTGTGCCAAACTCAG Gene BVV0102_044366 + 0 NULL GK000001.2:18748458-18909511 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000239 TCONS_00000235 TCONS_00000237 TCONS_00000238 TCONS_00000234 1 XLOC_000067 Coding TCONS_00000239 XLOC_000067 Coding Coding C1H21orf91 1:18720172-18752938 j TSS122 5624 1 TCONS_00000239_3 297 5 0.828506027773539 0.000910051125746643 0.00174372182690625 4.07283806244524e-07 0.00087737623491539 0.00024056444675658 0.000132466457533923 0.000489771633369441 3.8221442505085e-05 1.0231387602565e-05 0.000672205262372844 0.000334133072223241 0.000472096019140942 2.81875220929195e-20 9.55385816874193e-05 0.00024125777153937 0.00101949020345915 0.000230411120814228 0.000806973495016197 0.000544553891003105 0.00164500319072278 0.000634821091212727 3.19215946875104e-06 0.000578900412683512 0.000446935989420965 0.00129145574266419 0.00156927126909907 0.000766584981382674 0.000521621808974585 0.000228434045651896 0.000212469361595579 XM_005201152.1 C1H21orf91 PREDICTED: Bos taurus chromosome 1 open reading frame, human C21orf91 (C1H21orf91), transcript variant X3, mRNA. 0.0 1.013e+04 100.00 0.998577524893314 NM_001100420.1 C21orf91 Homo sapiens chromosome 21 open reading frame 91 (C21orf91), 0.0 3674 78.45 0.80298719772404 TCONS_00000239_3 sp|Q9NYK6|EURL_HUMAN EURL_HUMAN Protein EURL homolog; 0.0 563 89.56 0.996632996632997 1 coding 0 0 0 0 -0.905219871962938 0.0192317705312758 0.0374532903848214 0.580020858270746 CGTGCATTTTGCCTGCCGCGGACCTGGAATAGCAGATCTCGCTACGCCGAGCTAGCGAGACGCATCTAAGGGGCATTATGAACGAAGAGGAGCAGTTTGTAAGCATTGATTTGAATGATGACAACATCTGCAGTGTTTGTAAACTGGGAACAGACAAAGAAACACTCTCCTTCTGCCACGTTTGTTTTGAGCTAAATATTGACGGAATACCAAAATCTGATCTCCTGCACACCAAATCGTTAAGGGGCCATAAAGACTGCTTTGAAAAATATCATTTGATTGCAAACCAGGATTGTCCTCGATCTAAGCTTTCAAAAAGTACTTATGAAGAAGTTAAAACTATTTTGAGTAAGAAGATAAATTGGATTGTACAATATGCACAAAATAAGGATCTGGATTCAGACTCCGAATGTTCTAAAAACCCCCAGCATCACCTGTTTAACTTCAGGCATAAGCCAGATAAAAAGTTACTCCCACAGTTTGACTCGCAAGTACCAAAGTATTCTGCAAAGTGGATAGAAGGAAATGCAGGTGGCCTCTCAAACTGTACACAACGAATGTTGGAACAGAAGGAGAACACAAACTTTGGGCTTGCTGTGTTACAAGATTCGGGTACCACTTTATGCCATAATAGTGTACTGTGGCCTCATAGTCACAACCGGGAACAGAAAAAGGAAAAGACAATCTCTGGTCCAGAGGCTCATGTCCAGACCCAGCATCCACATTACAGCAGAGAGGAATTGAATTCGATGACTCTTGGTGAGGTAAAGCAACTGAATGCAGAGCTCCAACAGCAAATACAGGAAGTTTTTGAAGAGTTAGCCCACCAAGTGCAAGAGAAAGATTCTTTAGCCTCAGAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTCAAGAACTATTCCAAGTTACCATGTCTGCAGATGGGCCGAACGGGATTGAAGTCACACCTGCCCATAAGCAACTGAACTCAACTTACACTTACTTCCTATGCTCTGCCATTTTTTGGTCTGCTGGGCATGTTCACTTTGAAGAAGTTGAAGAAAGTTATGGTCAATTATTTTATGGTCATTAAATTTGCAAAGATTAAGGCAATATTCAACATCTTTGCCAAATAAAGCAGACCATTACACTCTAGTCTGCTAGGGTTAATCATTTTGATTCATTTGGGGAATCTGTTTTCCCGTAATTACTAAACAGCCCTCCCTAATTTATACCACATGTGACTACTTAAATATACTGTTACAGTGATTTTATTAAACATGTTTTAATGTAATTCACCTGTCAAAACAACAGAAGGTTAACAGTTCTTATATTAGTCTAAATTACTGAAGATAACATATAAGAGGGAAATGGAATTCATAATATCACCTCTTATTTATTGAGCAATATTTTAATATGAAAATTTTATATATAAAAATGCTATTTTAGGTACCTTTTCATTCTCTTTATAAATGTGTATTTGAATGGCTCTATATATTATAGTTACACTTCGTGTGTGAATATGTTACCCATATTTCACATCACTGCATTTTATTCTCTTAATAATGTTTTTACAGCTGTTATCTTGTTTTCCAAAGATAAATGTATTTTGGAATAGAAATCTATCTAGTTGAACTGTTTTGACTTCTAGAGGAGTTAATAACTTTTTAAAGCAAGTATACAGGAAAATAAAAGACATTATTTTTTTCTAATAAAAGCAATTATGAGTTCAGGAAGAAAATACTAATCTAGTTTTTGTATGTCAGCTCATCTCTATAGAAGTAAAAGCCTATTCTAGTCAGTATTACTTTCAATAATGACTTTGATGTGTTAGAATTTAGACAAGAATTTTAAGTCAAGCCTCACTTCCAAGTCAAATGTAGTATCTATCTTCAAATTTAATATGCCATGAAACTGTTGTCCTGTCTTTGAAAAAAATTAAAATCATTTTGTGTGCTCGATAAAAGTTCAAGAATTCAACTGTCCAAATTCTGTTAACATCATTGATAGTCGTGCCCAAAGAAAGCATTTTCTAAATTTTAGAATATAAAGGAAAAGAGAAGATTGCTTGTGACAGAAAAGTAAAACTCTTAATTCAAAAAAATAAGCTCCTTTTTAAGAAGATATTCTTGTTAGTTGCTTCTCATGTTTCCAAGAGTTTTGAACAAACAGGTTGTCTCAAACAGAGAAGTTTTCAAACCATATAGTATAGTAAATGCTATAACCAACGCAGATTTATAATGGGCTCTAAATTCTGTTTTCTGCTGGTACTTAGAATGTATTTATGAGACAGGATCCTTTGCATGAAAGCATCAAGAGAAAAGCCCATTAGCTTGGCAGTTTCATACACAAAGATATGAATAACTTCTGCCTTAAATTTGGCAGCCTGCCCTGGCTTGGGTCAGTCAGATTTTAGTCTTGAACACAAAGAGTATTTGACCAAGCAAAGAAACGCCTCCATCTAGTAGAAAACAAGTTTTTGTCATGCTAAAATGTAAAATGTGTTAAATTTGCCTGAGGATACTAAATGATATGTTACTGATTTTTGTCTTGTTTTCTTTGAAGTATGACATAACTGCTTTTTGGAGGGAGCTTTTGAAAGACACTTTGCATTTTTCTCGATTCTTTGAGTCATCCAAAATGAATTTAAAATCCAAGGAGTGGGGAATGAATTCATTGCCTTAGTTTTGATAAGCTTTAAATTGAATGTGTGCAATATCAAAAATCCCTATAAATTGTAAGTTGAATAGAGATCTTTCCTGATGCCAGTAAGTATCTCAGTGCTTCCTTGTTATGGACAGATGTTCAAATTTGACTTCACTCTCCTTTTTTGGCATAATTCACTAAGGATGTTACCAGCCAGTGTGCTGCTTGCACACATTTGTGCTTCTATTTAGATCACTTAGGGACAGTCGTAAAAACTGGGGATGCGTTGCCTTTGATAGAAGCAGTAGCTTGTTTCCAGAACAGCAGGCACATGGTACAGTCCTGAATACAACAGTGTTATCCAAACAAAGTGTTTGCTTATTTCTGGCAAATATGTAGCTTTACTACTGAGTTTGGCACAATTAGATGGGATCATACAGGTACCAAGGTCTTATTTGGAGACTCTGATTTACTCCAGTTAGATATTTATACGTAAGCTCTTCAAAGGCACGGTGCTCTTAAAAAATACCTGTGGTGCTGGTACTCACACTAGTACTTGATTTGGATGGATATTCTAGTTTAAAAAATTTTTAGACTAAAGTATTTTGCAGAGCAGTTTATCCAAATATTTGGTAAACTTATTTTATATTCCTATGTTAGTTTTCTCAAATATGCAGTTATTCTATATGCTGAAGTAAGGATAAGGGATAGAGTTGAGTTCTACCTTCAGAGAATATGAAATACTGCAAATATTGGTTACCACACTTGACCATTTTTCGGCAGAGTTGTTAGTACTTTTTGAGGATGTTTAGAAGAAAATCTCACCTATACTTTTAGTTTCAAAAATGGCAAAAAAGAGATTGTCAGCCAGCCATTGCTGACATTTTAATGGCTTATATGATTAAGGAGAGTGAAATAAGACTAATATTTTTTCACTTTAGAGTTCATAATTAGGCAAGTTGAATTAAGTTTAAAAAATTAGTTTGAAGTTGAAAGTGATTTTTGACAACACAAGATTGTTCTCTTTAAAAATTTTAAATGCTGTCAGCCTTTTAATTAAGCTAAAAATGTGTTTACTTTGCGATTATTACCCTTTGATCCTAGTATTTAGTGTCCAAATTAGTCTTTTGAAAGGCATGCTCTTTTCAAACCAGACCAGTGATAGATGATGCATGCCGGCAGCCAGATGTGTTCCAGTCCATTATGTAGCTTCTTACAGTGTTGGGAGCAAAGAAATGTTTTTAGTTTTTCAAATTATATCTTCATTTCACCACAGAGTGCCCACTTTTATATACATTTGAGGATTACTTTTAAATAAATTTCATGTTGGGAAGTGATTTCAGAAATATAGTCAAAATATATTGTTGGCATCTTGAGATTTCTCGGGTTTTTTATTTTACCATTTACCACTGAAAAGGGTTTAGAGCTCATTCTTCTTTGTTTATATATTTTTTTACCTTGGTGTTTATGCTGTTGCTTTCAGTCAGTTTTTGCTGTGTGTGTGTTTTCTTAATGAATTTTTGGGGATAGATGTGTATGTGTTAATGTTTACAAATTTTGGCTTTATTTTGTTTTAGAAGAAATCTGCTAGTGTTATTAATGTTGTAAAATGTAATACAAAATGTATATGCTCAAAATTTCAGTAGGAACTTTTAAAGAATAAATTATTTGTGTAGCTCAGTAAGCAGTTCAGGCTAGTGACCATAAAATTAGGTTATGTGACATAACAACTTTCGAATGGTACAGTGTAAAGTTCTTGTAGTGTTATTTTTATGCCGAAGTAAGATGTTTGAGTACTTTTAAAGTACTTAATAAAAAAAAGTTTAGTACTCAAGTATCTTTTGTTCAGATGTGGCTGTAAAACAAAGATAATTGATTTCAGTGTTCAGTTGCGTTTTTAAGTTTAGGTTGGTGGAAATAATTATTTGAGGAAATTTGTGGTGGAATGGGTTAGACTTCATTGGCCAAATAATAAGGTAATGAAGCCCTGGCACAAGTAAATGTATCTTGGAGAAGAGCTGTAATACTGTGCTTGGAATAACAAAGTTCTGTCCAGCGTCTCGGTATTTTTATCCACTTCATCCTTTCATAACTGACCTTATTAATAATGTAGCCTAACCTATTAAGCAACTTCATCACCTTGCTATGAACCATATCATAGCAAGTCTCTAAAACTGAGATCTTTAACACCTAGTTTGTAACATACACTTCTCATACTCTTTTTCAGTTTAAAAGAATTCAGATTACTAATGCATTTTAGTGATGTTGAATTAGTCCACAATTTTAACCTTACCAAATTAAAACATTGAAAAATCATGTGAGTATTGCCCTCCACCCTCCCTTCACAAAGTGTTGCTTGGAGCTTCTTTCAACTGCACCCAAAAAAAGAATTTTAGTAAATGTGTTTCTTTTTTCAAACATATAGAATGTTTATTTCCATCCTACTGCCTCTAAAGAGGCATTTTAGATGTTGAATTAGTCCACAATTTTAACCTTAGCAAATTAAAACATTGAAAAATCATGTGAGTATTGCCCTCCACCCTCCCTTCACAAAGTGTTACTTGGAGCTTCCTTCAACTGCACCCAAAAAAAGAATTTTAGTAAATGTGTTTCTTTTTTCAAACATATAGAATGTTTATTTCCATCCTACTGCCTCCAAAAGAGGCATTTTAGAAAGTGTTCAGTAGTGACTTCTGTTAAATGCTATTTTATACTTTTATAATTTGTGTGTGTGTGTTAACCTTGCTTTAAATTTGAGCAGAAATTCATACAAAATTGCCTAAGACGTCTGAGAAAAGAAAATGAAGCTGCCGTGATGAAAACCAAGTTGGTTTCAAAAAAGTTTATTTAGACATTACTTGGCTGTTATACTTTCCTTTTAAAACTGCAATAATTTATATATTTCTATTGCTCTGCTTTGGAACTGTAATTACATATGCTTGTCTACTATTTTTAATTTTACAAAAATAAAATAAATATTTTATTATCTGTTA EMBV3_13415 CTCAGCCAGAGCACCATCTGCAGGTTCGAGTCTCTCACTCTCTCGCACAACAACATGATT Gene GeneID:538520|POU4F3:XM_002689279:93_cdna Constitutive 0 NULL GeneID:538520 7 GENE POU4F3 NULL POU class 4 homeobox 3 EMBV3_05396 AGCATCATGGATGTGGCACCAAGTTCCTTAACTACAATGTGTCTATCCGCCGGGGCCAAA Gene GeneID:521383|PLA2G2A:NM_001075820:185_cdna Constitutive 0 NULL GeneID:521383 2 GENE PLA2G2A MGC151888 phospholipase A2, group IIA (platelets, synovial fluid) EMBV3_07695 GGCCAGCATTTCCTTAATACGAAACCAGACAGAAGTATTACAGGGTACCAATACATGCAC Gene BVV0101_029427 + 0 NULL GK000007.2:3274558-3315949 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12996 GGCCTCTTTTATACGTGTTTATTTTCTATGTGTGTCCTCGCGTGGGGGAGGTCGTTGTGG Gene GeneID:768080|TMCC2:NM_001077135:115_cdna Constitutive 0 NULL GeneID:768080 16 GENE TMCC2 MGC139674 transmembrane and coiled-coil domain family 2 EMBV3_34672 AATGGCTCCCAAACCAGGTCCCTGAACTCAGAGCGGAAAATGTATCCTTTCGGAAGAGCT Gene GeneID:281601|ADCY1:NM_174229:7_cdna Constitutive 0 NULL GeneID:281601 4 GENE ADCY1 NULL adenylate cyclase 1 (brain) EMBV3_03632 ACAACAGAGAGCTTGCATATTCTCCTCCATTCCCATCCCCTCACAACCCCACTCCTTCCA Gene BVT0102_152207 - 1 EMBV3_33744 GK000006.2:23178028-23187623 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202755 TCONS_00204709 TCONS_00202759 TCONS_00202754 2 XLOC_124027 XLOC_124509 Coding TCONS_00202759 XLOC_124027 Coding Coding SLC9B2 6:23147355-23182222 j TSS152050 5233 1 TCONS_00202759_3 326 0.289126695967896 7 0.850111856823266 0.000230182813780193 0.000180325450439587 5.60215947022813e-05 0.000105087435659747 3.30350220963438e-55 6.40435148861384e-05 4.1893664021681e-05 0.000274014424316982 0.000241340078248486 2.26055196207465e-05 8.74765612557899e-07 0 6.21148881532263e-05 7.1904695179045e-06 0.000101756224912675 0.000321473802258491 3.775992871676e-05 2.62175265504774e-13 0.000255408443263633 6.79796073649703e-05 1.35495613388314e-05 1.13729563568135e-08 1.46540402307009e-07 0.000200458652467363 0.000419700541865329 1.40931196281797e-05 0.000212515883708214 1.30718333180285e-05 2.79685509084177e-18 1.78426764625253e-09 NM_001193108.1 SLC9B2 Bos taurus solute carrier family 9, subfamily B (cation proton antiporter 2), member 2 (SLC9B2), mRNA. 0.0 1474 99.88 0.156506783871584 XM_005262758.1 SLC9B2 PREDICTED: Homo sapiens solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 (SLC9B2), transcript variant 0.0 1335 82.03 0.253200840817886 TCONS_00202759_3 sp|Q86UD5|SL9B2_HUMAN SL9B2_HUMAN Mitochondrial sodium/hydrogen exchanger 9B2; 4e-163 471 86.19 0.819018404907976 1 coding 1 1 1 1 -0.107481117621183 0.532361036412834 0.00972539010359431 0.903581444091254 TTCTAGGCATGCTGCTTGCTGGCTTTCTCATCAGAAATGTCCCTGTCATCAGTGATAACATACAGATCAAGCACAAGTGGTCTTCTGCTTTGAGAAGCATAGCCCTGTCTGTCATACTGGTCCGCGCTGGCCTTGGGCTTGATTCAAATGCCCTGAAGAAGTTGAAGGGTGTTTGTGTAAGGTTATCCTTGGGTCCTTGTCTCATAGAAGCGTGTACATCTGCTGTCCTGGCCTACTTCCTCATGGGTTTACCATGGCAGTGGGGATTCATGCTGGGTTTTGTTTTAGGTGCTGTGTCTCCAGCTGTCGTGGTGCCTTCGATGCTCCTTTTGCAGGAAGGAGGTTATGGTGTTGAGAAAGGCATCCCCACCTTACTCATGGCTGCTGGTAGCTTCGATGACATTCTGGCCATCACTGGCTTCAACACCTGCCTGGGCATGGCATTCTCCACAGGCTCCACAGTTTTTAATGTTCTCAAAGGCGTTTTGGAGGTGATCATTGGTGTGGTGACTGGGTTGGTTCTTGGATTTTTTATTCAGTATTTTCCAAGCAGTGACCAGGACAAGCTTGTGTGGAAGAGAGCATTCCTGGTCTTGGGGCTCTCTGTGCTGGCTGTGTTCAGCAGCACATATTTTGGTTTCCCTGGCTCAGGAGGACTGTGCACGCTGGTCACAGCTTTCCTTGCAGGCAGAGGATGGGCCAGCACAAAGACAGATGTTGAAAAAGTTATAGCAGTTGCCTGGGACATCTTTCAGCCCCTTCTCTTTGGACTGATTGGAGCAGAGGTGTTAATTACAGCTCTCAGACCAGAAACTATAGGCTGCAATAGGATCTGTGGCTTTGGACACAGCAAGATCACATGGAGAGAAACAGTTAGAAGGATATGGAATGGATGTGTTGACAGTGGCATTTTTGTCCATCATCATCACAGCCCCAGTTGGAAGCCTACTTATTGGTTTGCTCGGCCCCAGACTTCTCCAGAAAGCTGAACAAAATAAAGATGAAGAAGATCAAGGAGAGACGTCTATACAAGTTTAGAGGTGAAAAGAGAGAATGCTGAATACAGCCCTCAGAAGCATGCTGTCAGTGCCTGCTTTTGTCAGCTAGCAGAGACTAGTTTTATCCGGATGGATATTGACATATTTAGTGTTTAAGTGTAAATTAATAGAACCAGAATGTGGCTTTTTTTAAAAAAACAGCATTTTTAGCTATTACCGGGACGGTGGTAATGTTCTACGTCTGCAACCTGCTCCCTTCCTTATTTTTTTTTTCTTCAAATAACTATTCATCATTATCTCTTAGCTTGTATAGGGACATGTATACTTTGGGCTTCCCTGGTGGCTCAGCGGTAAAGAATCTGCCTACAACACAGTAGATGTAGGAATCACAGATTTGATCCCTGGGTCGGGAAGATCCCCTGGAGGAGGACATGGCAAGCTACTCCAGTATTCTTCCCTGGGAAATCCCATGGACAGAGGAGCCTGGCAAATTACGGTCCAGGCGTTGCATGGACCTAAGTGACTGAGCACACGATACTTAAGTGTACTACCACAATTTAATTTCAGTGTCCTGTTTTGCTAGCCAACAGCTTGCTCTGACTTAGTGTTACCATCACAATTTCATAATTCATGGTCACCTAACCTTTCATGCCTTGAATTGTTTTGGGCCCTTTTTTCTTTTTGTTTTTAAATACCATAACACAATCCTTCATCCATTTCTACCTTCCTTCTTCATCTGCCTCTTTTCCATTTCTACCTCTCTTACTTGTCTTTCTATGAAGTAGTATTTCTGATTGTTCCCACCAAAAATTTTTAAAAGTACACAAAATAATTTAATTGGTTCTTTCTCTTGCACCTGTCCATGTGTCAAAGACTAAATCCTATCCCCATAGTTAGCTTCACAGAGCCCCCCATTTCAGTGGCTCATCTGAGTTTCCTTCTACCTAAGCAGTGTCCTGACCTAGCCCTTTGTTTTTTGTGACCCACATTTTCAGGCTCTTCCTGTTCTCTAGGTAAGAGATAGCTAATTTTTAAATCTATGTCAGCCTCATGAATACCATATTAATCAGGGTAAGATAAGCTGCTATAATAAAGAAATGAAAAATTAAATACTTAAATAGAAAAATTTATTTTCCTCTTACAAAACCAGTTGACAGGGTTACTCTGCTCATGAGGTTTATTCAGAGACCCATGTCCTTCCATCCTGAGACTCTGCTGTGCCCTAGCTTAGGACAAAAGTCCCCTTTCTAGTCTTCAGGAAGAAGGAAAAAAAAGGAAGCCCAAGACAAGCAATTTATTTTTAAGGAAGTGATGTGGCAGCAGATACATCTCTCCTCTTACATTCTGTTGGTGATAATCACACCCACCCAGCTGAAAAGTATTATCTCTCACTAAGCATTCACATTCCCGGGAAATGGAAAGACCAGATTTGAGAGCCAGAAGTACTATCGTGTTGGGTGTTACCATCACCTAGTAGCATATCCTTGCAGGTTAACAAGGACTATCTAAAGATGTAACTTTAACCAAAAGAATGACTTCCATGGCAAGAATTTCAGGAATTGTGACATGCCAGTAGAGAAGATAAGAAAGTCTTACCTCAGAAGTCTCATTTTCTCCCACTTAATCAACTGACCATTTCTGCTTTTTTGTATCACTTGTTAAGTTCCTGTACTCTAGGTCAGCTCCTGCCTAGTTGTTAGAATAATCATGTTTAGATAATGTTGTCATTAGACTACCTAAGGTTCTGATTTAATAGAGACAAACATATGAACAATCTGTAAAAAGGGCTATAAGTACTCTGACAGAAGTGAGTATAGGGTACATTCACCCTTCAGACTACTCTTCCAACCCTTCCCATCATGACTTTCAAGCTGTTCTAAACCAGCTTAATTTTTATTAATCTAACATAATAGGAAGCCAGAGAGTTTTCGTTTTTACGTCAGCCTGACTCTGGTTCCTCTATAGGACTGTATTCCCTTAGTGTTTATGTTCTCAACATGGACCAGACTAGTTTATACCAAAGTTCAGAGAGGTGAACTTCCTTGGCCAGATGCGCCTTGGTTGTAGCACCATAAACTTAATGCTCATCTGGTCCTCTACTTTCACAGGCTCTGAAACTAGAGTCACCCAACAAATATTTACTAAAGCCTTTGGTGGCCCAGGCACATCATAAAGACTAATGTTGTTACCATCTTTAAGGATCTGACAGTCTGATTGAGGATAGCGACCATTAAACAAGAAGTTGCAAAACAGTGTGATAAGTGCCATGATGCAGAGAGTACAGGGGTGCCAGGGAGCTCATAGCAGGAGTAACCCATAAATCAGGGGGAGGTGCACTTTAGGCGCCCACTCCAGCGTTCTTGCCTGGAGAATCCCAGGGACAGAGGAGCCTGTTGGGCTGCCTTCTATGGGGTCGCACAGAGTCGGACACGACTGATGCGACTTAGCAGCAGCAGCAGCACTTTAGGCACAGCCTCCAGAGAAAGTAGGACCTCGGCTAGGATGTGGGGATAATTAGGACTTAGCAAAAGGCATGGGAGACCCAAGGGTGCTGCAGTTAGTGCAGGTTCCCATGTTCACCAGTAACTCTTCTCCATGTAACATAACAGGCTTTCAATACTAATACAAAATACAGTTAGTATAAGCAAATAAGAATGTTGTTGTAAATATTCAAGGCCCCAAGAAAGAATTAGAAATGGAAATTCAGAGTGTAGAAATAGTTGAAAATCCCCAAAAGTGACTGCCCATAGCCTATGCCATTTTCAGAGCATGTGGTGACTTTTTACCTACCCCTCCTCGGTGAGCAGCCACCAACCAAATCTCTGTGGCTCTCTGTCCAGTGGGCTTCCCTGGCAGCTCAGTGAAGAATCTGCCTGCAATGCAGGAGACCCAGGTTCCATCCCTGGGTCAGGAAGATTCCCTGGAATAGGAAATGGCCCACTCCAGTATTCTTGCCTGGAGAATCCCCATGGATAGAGGGGCCTGGCAGGCTACAGTCCATGCAGTCACAAATAGTTGGACAGGACTGAATGACTAACACTTCCACTTTCTCTGTGCGGTGTTGGTCTCTGCAGGACTCACTGTGAAGTCTCAGGTTTGTTTTGTCACCACAAAGTAAACCACAGCTCTTTTCTTGGTTGGTAAACTCAGAGTTAACTTGATACAGAATGCTGACTCAAGCCAATCAAACTTACCCCACCCCACCACAGATAGAAACCATTGCTCTAACCTCTGGGTGACTGAAAGAAAGGTGTATCATATACATACTTCTATCAGAGTACTTGTAGTCCTTTTTTCAGTTTGTTTCTGGGTTTGTTGCCTATTAAATTAACCCTTGAGGGGTGGGAGCCTTATCTTGGTCATCTTTGAAACCTCAGCAATTTTTACAGGGTATGGAGCAGGGTGGGCATTTAGTAAATTGTAATGAACTGAATCAGTGAGGAGATTCTCTTTCAGTATCAGAAACCTACCTGCCGCATAACAGTTTAGATTTTAGTCCACTTAGTGCATCTAAGCTGCTCGGGCTACTACAACAAAATACCATAGACTGAGTGACTTAAACAACCAGTAATTATCTTCTCACAATTCTGAAGCTGGAAGTCAAATGTGAGAGTTGCCAGCAATGATCAGGCTCTGATGAGAGCTCTCTTCCTGGCGTGCTAATAGCCTCCTTCTCACTGGGTTCTCACGGGGTGGTGGAAGGAGTGGGGTTGTGAGGGGATGGGAATGGAGGAGAATATGCAAGCTCTCTGTTGTCTCCTCTAATAAAGTCACTAATCCCACCATGAAGGCTCTAGCCTCATGACTTAATCTAATATAATTACCTCTCAGATTCTCCCTGTCCAAACACCATCACGTTGAGGGGTTATGGCTTCAGCTTATGAATTTAGTTGGGGGACAGAATTCAGTACACATCAAGGGCTTCATACTTTCAAGGACAGCGCCAAGCAAACACTGTAAACTTGCTCTCTTCAACACCCTTTTTTTCCTAAGGTGGGTGCTGTCAACCTCTCCTCTGAGAAGTGTTTGTTTCTCTTTAGGCAGACTGATTAGGTTTCTGCTTTTTAAGTTATTTTCGCCTTCCCGTGTTTTCCTTTCTGGTATTAACTTCATATAACATGGACTGGACTTGAGTGTTCTCAAAATGTCCTCAGTCATGTGTTTGCAAATGATCTCACCCATTACATTCTTTAAAAATAGTAATGATTATTTTGTCTGATTACAAAATAATACAT EMBV3_40063 CTGAAGGTGAAGAGAATTAGGTGGCTCCAGAAGCACAATACCCAGGTCACCACACAACAC Gene GeneID:326579|BZW2:NM_001104961:5_cdna Constitutive 1 NULL GeneID:326579 4 GENE BZW2 HSPC028 MGC166073 basic leucine zipper and W2 domains 2 EMBV3_39315 GATCAGTAAAGGCCGCAGGTCACTCATCCACTGTTGCACTTGGAATCCTTGGGGTCATTC Gene GeneID:533844|CD163:NM_001163413:43_cdna Constitutive 0 NULL GeneID:533844 5 GENE CD163 M130 CD163 molecule EMBV3_31057 GGCTGGGGGCAACTGGGGGTAAATATGCCCTCTACAGACAAACTACAGGAGGTAGATCTT Gene GeneID:100125946|LOC100125946:NM_001105509:2_cdna Constitutive 0 NULL GeneID:100125946 21 GENE LOC100125946 MGC140062 hypothetical LOC100125946 EMBV3_26602 TGCTACCATTCTAACACACACGAGGATTGCACAGATTGGTCTAGCGGTCATCACCAAGGG Gene GeneID:523090|LOC523090:XM_002693226:460_cdna Constitutive 0 NULL GeneID:523090 15 GENE LOC523090 NULL similar to olfactory receptor Olr53 EMBV3_05294 TCTATGGGATCGGACGGTGCAGACATTGTGGCTTGGATAACACCCATCCTCCAGTGAAGA Gene GeneID:616839|CCDC93:NM_001098468:3_cdna Constitutive 0 NULL GeneID:616839 2 GENE CCDC93 NULL coiled-coil domain containing 93 EMBV3_32777 TTACTGGCTGTGGTGATGGGGGTGGAGTCAGGGGGCAAGGGTCCCAGCCTAGACTGTTGA Gene GeneID:515835|ARMC5:XM_002698104:153_cdna Constitutive 0 NULL GeneID:515835 25 GENE ARMC5 NULL armadillo repeat containing 5 EMBV3_02598 CACTTCAGTGTGTCAGACCCTGAGTTTAGAACCACACAACTGCTTGGTACATGATCATCG Gene GeneID:533957|HAO1:NM_001079781:1198_cdna Constitutive 0 NULL GeneID:533957 13 GENE HAO1 NULL hydroxyacid oxidase (glycolate oxidase) 1 EMBV3_41630 TAACCCTCCCTGCCGGCCATGCACTTTTGTTGCTGGTCTGGAAAGTCTGCTTCCACTTAT Gene GeneID:517728|NAPB:NM_001046233:35_cdna Constitutive 1 NULL GeneID:517728 13 GENE NAPB MGC137651 N-ethylmaleimide-sensitive factor attachment protein, beta EMBV3_42525 CCTTGGAAATACTGGGTAGCTCTTTGCCTCATCAGGTCTTGCCCTCCCTAATAGTCCTTC Gene BVV0102_280123 - 1 EMBV3_32531 GK000005.2:25799054-25802666 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191131 TCONS_00191132 1 XLOC_116817 Coding TCONS_00191132 XLOC_116817 Coding Coding ITGA5 5:25790648-25800796 j TSS143276 4676 1 TCONS_00191132_4 604 0.029940119760479 18 0.540948063467035 2.8363556252631e-16 5.08463654025127e-11 0 0 2.40077933576628e-09 0 8.83325177378567e-05 1.95579555637746e-09 2.93453053777844e-05 3.25703091262479e-09 2.65072669306952e-09 2.04759822978109e-05 3.15409862031362e-10 3.50601594147966e-09 2.51680719259462e-11 0.00369741270955623 5.0674387473836e-09 0.0124004335500653 1.98828310915656e-10 3.46525332123925e-09 1.1545046808514e-09 0.000879259903655459 4.7383861966982e-05 0.00440829230310116 1.48552329443916e-14 3.29757402917685e-09 0 0.000182440356770535 0.000597788028907658 1.31707958670008e-05 NM_001166500.1 ITGA5 Bos taurus integrin, alpha 5 (fibronectin receptor, alpha polypeptide) (ITGA5), mRNA. 0.0 5003 100.00 0.593028229255774 NM_002205.2 ITGA5 Homo sapiens integrin, alpha 5 (fibronectin receptor, alpha polypeptide) (ITGA5), mRNA. 0.0 3470 87.88 0.590034217279726 TCONS_00191132_4 sp|P08648|ITA5_HUMAN ITA5_HUMAN Integrin alpha-5; 0.0 1071 92.41 0.980132450331126 1 coding 1 1 1 1 0.031128373515971 0.824512287343351 -0.0115847095219601 0.879815752283356 CAAGACCTCCCAGCGTCTCCTGGAGGATTTTAATCCCAATGTCTAGACCTTGGGGCTTGAAGAGTTTAGCATACTGGGAATGACAGATGGGAAAAATAGGATCCTGGGTCCTGGGGTCTGGTGGTAGAGATTTGAACTCCTGGACTCCTGGCCTGCTGACTGATCTGATTGTGGGGTCCTTTGGTGTAGACAAGGCTGTGGTATACAGGGGTCGCCCCATCGTGTCTGCCAGTGCCTCCCTCACCATCTTTCCTGCCATGTTCAACCCAGAGGAGCACAGCTGCAGCTTGGAGGGAAACCCTGTGACTTGCATCAACCTTAGCTTCTGCCTCAATGCTTCCGGAAAACATGTTCCTGACTCCATCGGCTTCACGGTGGAGCTCCAGTTGGACTGGCAGAAGCAGAAGGGCGGGGTGCGGCGGGCGCTGTTCCTGGCCTCCCGACAGGCCACCCTGACCCAGACCCTGCTCATCCAGAACGGGGCTCGGGAGGACTGCAGAGAGATGAAGATCTACCTCAGGAACGAGTCAGAGTTTCGAGATAAACTCTCCCCGATTCACATCGCCCTCAATTTCTCCCTGGACCCTCAAGCCCCAGTGGACAGCCACGGCCTCCGGCCAGTCCTACACTACCAGAGCAAGAGCCGCATAGAGGACAAGGCTCAGATCTTGCTGGACTGTGGAGAAGACAATATCTGTGTGCCAGACCTACAGCTGGAAGTGTTTGGGGAGCAGAACCACGTATACCTGGGCGACAAGAATTCTCTGAACCTCACCTTCCACGCCCAGAATGTGGGTGAGGGTGGCGCCTACGAGGCAGAGCTTCGGGTCACAGCCCCTCCGGAGGCTGAGTACTCGGGACTCGTCAGACACCCAGGGAACTTCTCCAGCCTGAGCTGCGACTACTTTGCTGTGAACCAGAGTCGTCTGCTGGTGTGTGACCTGGGCAACCCCATGAAGGCTGGGGCCAGTCTCTGGGGTGGCCTTCGGTTCACAGTCCCTCACCTCAGGGACACGAAGAAAACCATTCAGTTTGACTTCCAGATCCTCAGCAAGAATCTCAACAACTCGCAAAGCGACGTGGTTTCCTTCCGGCTCTCGGTGGAGGCTCAGGCCCAGGTCTCTCTTAACGGTGTCTCCAAGCCCGAGGCAGTGCTATTTCCGATGAGCGACTGGCATCCCCAAGACCAGCCGCAGGAGGAGGGTGACGTGGGCCCTGCTGTCCACCATGTCTATGAGCTCATCAACCTGGGCCCCAGCTCTATTAGCCAGGGCGTGTTGGAGCTCAGCTGTCCCCATGCTCTGGATGGCCAGCAGCTCCTCTACGTGACCAGGGTCACAGGACTCAGCAACTGCACCACCAGTCACCCCCCCAACCCAGAGGGCCTGGAGTTGGATCCTGAGGGTTCCCAGCACCACCGGCTGCAAAGACGGGATGTTCCAGGTCGGAGCCCTGCCTCCTCAGGGCCTCAGATTCTGAAATGCCCAGAGGCAGAGTGTTTCAAGCTGCGCTGTGAGCTGGGGCCACTGCACCGGCAAGAGAGCCGAAGTCTGCAACTGCATTTCCGTGTCTGGGCCAAGACCTTCCTACAGCGGGAGCACCAGCCATTTAGCCTGCAGTGTGAGGCCGTGTATGAAGCCCTGAAGATGCCCTATAAAATCCTGCCTCGGCAGCTTCCCCAGAAGGCGCTGCAGGTGGCCACAGCTGTGCAGTGGATCAAGGCAGAAGGCAGCCACGGAGTCCCTCTCTGGATCATTATCTTAGCCATCCTCATTGGCCTCCTGCTCCTCGGTCTGCTCATCTATATCCTCTACAAGCTCGGATTCTTCAAACGCTCCCTCCCGTACGGCACCGCCATGGAAAAAGCTCAGCTCAAGCCTCCAGCCACCTCCGATGCCTGATTCCTCCCAGTCTTGAAGGCCCAGTCCCCCCACCCTCAGTCTACTGACAGGGAGGGGGCTGGGCGCTTCCTGAAGGTGCTGAGGGCCAGGGAGAAGCTCCTCTCCCCAGCCCAGAGACATACTTGAAGGGCCAGAGCCGGGAGGTGAGGAGCTGGAGATCCCCTCCCCCCATGCACTGTGAAGGACCCTCGTTTACACATGCCCTCCTCATGGATGAGGGAACTCAGATCCAGGGACAGAGGCCCCAGCCTCCCTGCCACCTTTGCATTTTGGAGAATTTCCTGAAAACACCTTGGAACCAGAACTAGGGGATCCAATCCCAGTTCTCCAGCTCAGATGTGGCACCAGGACTTCCTGTCCAGCTCCAATCCCGCAGAGATCTGTCGCCGGCCTTGCCAGAGATCCACAGGAAGCCCCCAGCTAAGAGCCTGGAACCTGGGGAGCGAGACATGGCAGCTCTGGACAGCCCCCACCCCGGTGGGCCAACAAAGAACACTAACCATGGACGGCACCCCAGGCCCAGCTCAGGACAGATCCCACACCAGGATCCATGCTGGCCCAGAAGCAGCTCCAAGGGGAACCAGAACTTTCACAGGGCCAGATCGAACCTGGGGCCTCTGGGGCCTGAAGTTCATCTGGGACCCAGACTCAGACATTGGTAACCTAACTAGGCAGATCCAGGACATTTGAGCCTGCTCCAGACCTGGGCCTGGAGACCAAATCCACCTCTGACTCAGGAGAAGTCAGGAATTGCCCAGGACCCTGAAGGGGCCATGATGGTAACAGATCTGGAACCTTAACCCTGGCTCGACATAGGCCCTCTCAGTCCTCCACAGAAAAGGGAGCCTGCTGTCCCGGGCCTGCGGGTTTGGGTTCTGCCCACCAGCTGCACTGACGCTGCCCCTCCTCTCCCTACCCAACCCTCCCCTCACCTCGGCTCCGGACACCCGGGACTTATTTAAACTCTGTTGCAAGTGCAATAAACCCGGCCCGGTGGCCCCACTGATCAGAGCTGGAATCTGTCCTCTCCCTACTCTTTCCAGATCTTTCCTGGAACCAGACCTCTTGGTGGGTAGGAAATGTTTCTTGGAGTTTGTTTTCACTGGGAGCCAGGAGTATGACCCCCAGGAACTGTGGAACTAGTTTTGGGGTTACCTTTTCTTACATGGAAGGGGTGGGCTTGACTCCTGCCCATCCTCCAGCCCCACCAGATCTGATCCCAACACCTCTAAGAGAACAGGGAAAGGAATTCCTTCTCTTTGGATTTGAGAGTTAGGGAAGAATACAAAAGGAGAGGTCAGAGCCGAAGGTGGAGGAAGATGGCCCAGAAGATTCACTTGGGCTTCCAGAAATTAGAATAAGGAAAAGGGTTGAGAAAAAAGGCCACAGAACTAAATCAGAAGAAAGCCAGTTGGGTTTGTGTTTTGTTTTCATTACCCATTGTATTCCAATGGGTAGAGGGAATGTTAAATAGTTTACATACATTATCTCATTTAATTTCTATCAAATTAAATGTGCAAGGCAGGCACAATTAACCCCATTTACACAAGGGGAAATTGAGGTCCAGAGAAGTTATGTAACTTGCCCAAGGTCACAGAGTCTAATTCAGCCTTGCCTGACTGTGAAAGCCCATATTCTTAACCGACATGACAGACGGTTCAGGTCTTTGAAGATAAATTAAAGTGAGGGAACCCCTCAGCATCCTCTGTCTCCTCGAGGCCTATCTTAAACTAATGTCCAGCAAGAGCATGGGGAAGGGTGCTGAAATTCAAATGGACTGTTAGAGACAAAGGTGTCTATGTCCTGCTAGACTGAGGTCAGCCACCAGAGGGCAGCACACTCACAAATTTATGGGAATTTGGGGAAGGGAGGCTATGTATGAGGTCCTCCTCACCCTCTTCCCCCATCAAGACAATAGTTATTAACTTAGGCTCCTGCCTCTCAGTTCCAGCATGATCTCAAAATATCTCTCCTTGGAGTTCAAAGCTGCTCTACACTCCAGTCTTCCAACTTCTTTATAATTCTGTAACTCAGAAACTTCTTCCCAGAACCCATAAATGAAGGACTATTAGGGAGGGCAAGACCTGATGAGGCAAAGAGCTACCCAGTATTTCCAAGGATGACAGCTGTGGCATAGCAAGGCACTGAGACTTCTCCAAGAATGAAATCCCATACTTGCCTTCTTGGGAGATGGGTGGGAATGGCAACAGCCACACTCCAGGGGCCAAATCTGAGATTTCTTACACTATGATGAGGAGGAAATGAGGAGGGGAAGTGGGCTGTATTGGGCTGGTATCATGGGTGTGTCTGTGTAGTTAGTGCCTGTACCTTTGAGTCTCTGAGAGTGACAAGGTCTCTCTCAAGGAGGCACAATACAATGTTGGAATTCCTTGGGTTCTGAAGTGCTGCAGATGTAACCCAGCACCAGTCTCTGTCGCTGAACTGTAATTCTCAGGCTCCGGTCTGTTTCCCCTTCCGAATCTCCCAGCCCCTCCAAAGCATGTCTGCCTCTCATCTTGAGACTTGAGTGATGCAGAGAGACAAGAGAGCAGGGGGAAGGCCAGAGTCCTAGCCCTGTCTGTGTCAGTGGAGATGGAAAGGAGGCCTGGGACGGGAACAGCAGCTGGGGGTGCGTAAGGGGGAGGGGGCTTAGGAGAGGCAGCTGGCAGGCGGGAAGCTGATCTGGGGGTCTCAAGTTTCTTGACATCAATTAGAGCAGCCGGCCTGGGCTCATTAGTAGCCCGGGGTGCAGGGCTCATCAATAATGAATTCACC EMBV3_06725 TGTGCTCCTATGTTCAAGCTTTCCCCACAGGGGACATCTTGGAGAAGGTCAGTGTCCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10794 GGGAAGCCACCTCTGAGCAGTAGAATCCCTGTTTTTCCCTCACTGTGTCAACACAAGTTA Gene BVV0101_052472 + 1 EMBV3_25539 GK000020.2:10117675-10127242 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37142 GGTGAAACTCTGGTAGTGGAATGTGTGTGGGAGAGCTTTTCTTGTGGCACTTACCCCAAC Gene GeneID:516156|ZNF331:NM_001103251:56_cdna Constitutive 1 NULL GeneID:516156 18 GENE ZNF331 MGC151505 zinc finger protein 331 EMBV3_34931 GTATACAACAGAACCAGCCCACTTCCCCCAGGCCCATCCCCGGAAATCATCATCTTTAAG Gene GeneID:513177|PTGR1:NM_001035281:5_cdna Constitutive 2 NULL GeneID:513177 8 GENE PTGR1 LTB4DH MGC127457 prostaglandin reductase 1 EMBV3_15171 CCAGTGTAGCAACTCCGAAAAAAACACCAGCCAGGACTAGGGAAAGTAGCATGATAGCAA Gene GeneID:535033|LIX1:NM_001078003:23_cdna Constitutive 2 NULL GeneID:535033 7 GENE LIX1 MGC142689 Lix1 homolog (chicken) EMBV3_23811 GCTGGGACAGCGGCGGCCGGAGCGCGAGAGGTAAACCTCAGCCGGTGCTGCAGGTGGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19698 TGAGCCCTGTAGCAAGCGAAGGGACCAGATTTCCTAACTAAAGGATGTTGTGCGTTTTCT Gene GeneID:534568|KCNMB2:NM_001080300:23_cdna Constitutive 0 NULL GeneID:534568 1 GENE KCNMB2 KCNMB3 MGC138124 potassium large conductance calcium-activated channel, subfamily M, beta member 2 EMBV3_42281 CGTATCTGAATCATGGATCTCATTCCTAGCAAAGTAGGTAGTCAGCACAGGTTTTAAGCC Gene BVV0102_068382 - 0 NULL GK000020.2:155116-182971 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114219 TCONS_00114220 TCONS_00114217 1 XLOC_069232 Coding TCONS_00114217 XLOC_069232 Coding Coding PANK3 20:174956-204785 = TSS85234 10537 1 TCONS_00114217_1 370 0.222454208977887 7 0.64697599570873 0.000334277578695107 0.000208762788881791 0.000186521021985446 0.000346101590581102 2.76227572637789e-07 0.00010046460854436 2.43936471213774e-05 1.42667404143207e-09 0.000747348035711181 7.41930564525214e-07 1.28872646726134e-17 9.57543751931377e-05 5.70564407331198e-05 6.71618151294377e-08 8.94140235461078e-05 0.00751440079620431 0.004865067653108 0.0054877842476121 3.00750681851999e-08 0.000357795648990333 8.84003588409653e-05 0.0038094312881925 0.00586215829632341 0.00713113713225519 0.000411608012053879 0.00031219405665108 0.000305619638527887 0.000768717690611786 0.000461181680588754 0.000750398012749774 XM_005221378.1 PANK3 PREDICTED: Bos taurus pantothenate kinase 3 (PANK3), transcript 0.0 7705 100.00 0.405333586409794 NM_024594.3 PANK3 Homo sapiens pantothenate kinase 3 (PANK3), mRNA. 0.0 2608 86.42 0.208313561734839 TCONS_00114217_1 sp|Q08DA5|PANK3_BOVIN PANK3_BOVIN Pantothenate kinase 3; 0.0 764 100.00 0.997297297297297 1 coding 0 0 0 0 0.0339391441367436 0.81249793091872 0.0640156913591383 0.224603367186955 GGTTCTCCGTGCGGCGGCGGCGGCTCAGGGGACCGGGGCCTTTTGTTTGGAGCGGCGGCGGGGGCCCCGGATCGGCGAGGCCGGCGGCCTGCCCCTACTTGCTCGGTCCCGGCCGCCCCTCTAGGGGGTGGGGGGCCGCCCCTTGGGCCGGGCCTAGCTTTAGGCGCCGCCGCCCCGCCCTTGGCCCGCCCAGCCCGGCCCGAGGGGAGGAACTGGCCCGGCCTCCCCGCGCGGCCCAGAGCCACCTCTGGAGTCGTAGCTACTGCCCTCCGCGCGCCGGACTAGAGGCTACCCCTCGCCCCTCAGGCAGACGCCATGAAGATCAAGGATGCCAAGAAACCCTCTTTCCCGTGGTTTGGCATGGACATCGGGGGAACTCTGGTAAAGCTATCATATTTTGAACCTATTGATATCACAGCAGAGGAAGAACAAGAAGAAGTTGAGAGCTTAAAAAGTATCCGGAAATATTTGACTTCTAATGTAGCATATGGATCCACTGGTATTCGGGATGTACACCTTGAACTGAAAGATTTAACACTTTTTGGCCGGAGAGGGAACTTGCACTTTATCAGATTTCCAACCCAGGACCTGCCTACTTTTATCCAAATGGGGAGAGATAAAAACTTCTCAACATTACACACGGTGCTATGTGCTACAGGAGGTGGTGCTTACAAGTTTGAAAAAGATTTTCGCACAATTGGAAACCTCCACCTGCACAAACTGGATGAACTTGACTGCCTTGTGAAGGGCTTGCTGTACATAGACTCTGTCAGTTTCAATGGACAAGCAGAGTGCTATTATTTTGCTAATGCCTCAGAACCTGAGAGGTGCCAAAAGATGCCTTTTAACCTGGACGATCCCTATCCGCTCCTGGTAGTGAACATTGGTTCGGGAGTCAGTATTTTAGCAGTCCATTCCAAAGACAACTATAAACGAGTAACCGGAACAAGCCTTGGAGGGGGTACCTTTCTGGGTTTATGTAGCTTGTTGACTGGCTGTGAAAGTTTTGAAGAGGCTCTTGAAATGGCATCGAAAGGTGACAGCACGCAAGCTGACAAACTCGTCCGTGATATTTACGGGGGAGATTATGAAAGATTTGGTCTGCCTGGCTGGGCCGTGGCATCTAGTTTTGGGAATATGATTTATAAGGAGAAGCGAGAATCTGTTAGTAAAGAAGATCTAGCAAGAGCTACTTTAGTTACTATCACCAATAACATTGGTTCTATAGCACGAATGTGTGCTGTTAATGAGAAAATAAACAGAGTTGTCTTTGTTGGAAACTTTTTGCGTGTCAATACTCTCTCAATGAAACTTTTGGCATATGCACTGGACTATTGGTCAAAAGGTCAACTGAAAGCGTTATTTCTGGAGCATGAGGGATATTTTGGAGCAGTCGGTGCACTTCTTGGTCTGCCAAATTTCAGCTAAAGTATCAGGTTTATCTCTGCTAATGTCATTCAAGAGGATCTGAAAACCAGAGGCATTATTACTGAGTTATTTTTCACTGGGAACCAAAGGATAAAAGAGTAGCACTCTTCCTGTTGATTTTTAAATGTCAGAATGGTAAGCTGCTAAATGTTGCCATGTTAAAAAGAGAGCTCCAGTAACATGAAATATTTCTAATTGGATTGCTTTTCTTTCTGTATATAGCCAGTGTTAAATCCTTAAATGCAATACAGCCTCTGATGATTGAGCTTCCTCTCAAAAAGACTTTCTATTTATTTTATGTAGCCAGCATTGCAGTACTGTATGTTCAAACATGAATCTTAAAGTCTCAGAAATGTTTCACTCATGAAAATAATTGATTCTGAATATTTGTTACAAATCTGTTCTGTGTGTGTTTTGGTTACTAATACATGGATAGTAACATACCCTGTGTGGAATCTTACTGAAATGGCAATTAGAAATGATCGTTTTTATGTGATTTTAGAAATGTTAAAGAAATATTAATTATTCATTATTGTTTTCCAAACATATCTTCTCCCAAAAAGTGTGTTTATGTGATCTACCCCCAGAAGTATAAGCTCTTTCAAATGCCATAATTTAATAGAAATACTATTGTTAAACTTTACCTGGAATTTCAGAGTGAACCCTAGGAAATCACCACATAATTGGTGATACTGCATTTTTTGTATTTTGATTATCAGTACATATATATGTTTATCAGTACATTTAAAAATGATTTTTAATTGGAGGCTTAATTACTTACTTGAAAATCTGTTCGTTGAGGTTCCAGAATGCTTCAAATGGGGCGTAGTTAGTTTATGTGTATTGGTAGGGTTCTGTGCTCTTTCTACACCACATCTATCTTAGGCCCAGAGTTAGCCATTTCTGTTTACTTACGTCTGAAGCATCAAAGCTAAAGACTTTCTTCTTTTATGAGCAGCAACAAAATCATTTATTCTAAATGGATGTTAAGGAAATCTAAAGGTCAATGGTTTTGAAACTGGGAATCTGAGGCAGTATTGCAGAATTATGAAAGGATCATTGTATATTCTGGTAATAAAAACATAGTTCCAAAATTTGTATATCCATTTGCCTTGGAATTCTATATTTTGAAGTCATTTTTAAATAATGCTATAAATTTTTTCAGATGTTTACTTTTGCAGTAACGTTTTGGAGATCCAATAATAGTTCAGCGAAGTTTTCTGAGACTGTTAGTGATGATTTTAGGTAGTTGAAAGACTTGGGGAAATTAGGAAAAAATAATTCACTTCCTTAAATTACATCTGGATGTAATCTGGATGTATTTTGAAAATCTGGATGTACTTTGAAGAGTTTAAAACTTGTTTACAGAAAGGAAGAAATGTTACAGTGTGTTTTTACAGTACAGTTTTGCTCCATAAAGAACAATTTTCAGTTGACTCTCAAGAGCTGCTTGATAAAGATATTTCTCAAGTTTTGCATTCAAATACTTAAAATTCAGTTTTTCTTTCTCTGTAGACATGAACATATGAATAAGAGTAATGTTCAGAGGGGAAAGCATGTGAAGGTAATTTTTTAGAATTTAGAATGTTTGGAACTTTGAATTCATTTCAGTCAGTGGTCATTTTGAAAATCTATAATGATTAAACATTTTCTGCTTAAATGTTTCCATTTTGTGACTAGATATTTCAGCCAAAAGCTATCTGTTTATTTTAGAATTTTGTGATTTGGGTATCTGTACAAAAAGATTTTGCTTTAAAATGATAGCTTTAAGTTTTACACTTGTGACAAATCGTATGTTAGCAGTTACAGGTTTGGGGCTGTCTTTAAAAGAAACGGAATGGTAAAAGTATATAAAATTTAGTTTGATCAATACTTTGGTTAATTTGGGACTATGATTCATACTTTTTGTCTTTTGAACCTGAAGCTCTGCCTTCTAAAATGCATATAAAGTGAACGACTTGGCTTTTCTCTTGTATAGTCTAGAATGACTGGAATAACTAATAAGTATTTCTAATAAGAACATAGAGTTGTGATGAAGGCTGCCAAGATTCTAGTTTTTTATTACAATCCCAAGAAAATGCTTGTAAGCATACAGTGGTAAATAGGTTTGGTTCTAATCCCAGTCAACTTAATGCTGCAGAGCTCCTAAGTACTTGAACAGTGCTAATAGAAATCAATATGAGAAATCAATGTCTAGTAGACACATTTAAAAAATAAAACGAAACAGATGAGATTCTTTTAAATTAAATATTTTTATTTAATGCAGTGTATGTTACCATTTCAACATGTAATACATTTAAAAAGTTACCTAGGAGTTTTTTAAAGGATTGTTGCTACTTAGTCTTCAAAGTCAGCATATACTTCACACTTATAGCACAACTCAGTTTAACCTATTTCAAGTTTTCAGTAACCACATTTGAGTAGTGGTTATTGTACTAGTGTAGTTTCTGGAACTAGCTCTTAGAACTATGAATATGGGAACCTAATTTTTAAAAAACAAAAAGAGGGAAAAGAAGTACCTTGTTTGGCCTAGTTTATTTTACTCAGGCTGTATTTCTGACCATTCCAAAAATTATCTTACATTGTATCCTGCCATCTCATTATAGTATGTATCAGTCTTCTAATGATACTAATAAAATAACCCAAGACACATGCCTGCCATCGTCATCAGTCTGTCAAAATATGTATTTCCTTCACTGAAGTAAATGTGATGATTCCAGTGTCTTAAACTCCCCCCGCCCCCCCGCCACCCCTGACATCTTGTCTAACTGAACTTTGAGAAGCCAATTCTAAAGAACTAAAAACAGACCCTTTTAGTTCTTCATTGAGTTCTGTACACACAAAGAGAATCGTGTTTATAAGTTTGTCTTTGATTTTCGTTTTTAAACCCCGGCAGTAACATTTTCAAATGCAGGGGGCACTGCCAGCTTGTTTTGGGGCTGCGTGAAGAGCACAAGGTCTTGAACCTTCCACCACCACTACCACCATCCCTTCCCATAGAAGATTACCTTTTAACTCGACTTGGAGAATTAATGGCCTTCTGTTCTACACCCTAACTTCTCCCAAGACAGCGTACTTGTAGACCTCCTTGTTTCTTGACATGGGTGTCCCCTACTCAGCTGCTGTAGTTTAAATAGGTGGACTGTTAGTTTAGATAAAGTTAGTGCCATCGCCAGTGATACATGTGGTGTCTTGACAGTCCTTCTAGAGGTTCAGATTGTTTGCCAAATGTTAGACTTTATAAAGATTCCTGAATTTTTTTACCTTTGCGTGCAAATGTGTTTGTTGTACTTTAAGTACCAGTTCCTGAAAGACCATTTCTGTAAGAAAAATTATGTAGCTCAGAGGGAAGAGGTTTCTTCTATGTTCAGTGGTACTCTTGCCTTCTAAGAGCAGTCCACCACATCTTGCCTTGATTTCTAAGATTACATTCTTGGGTGGAAAGCTTAGTGAGGCAATAGTTTGCAAATGTCCTTTATAACCACTCTGCTGATTATATGCAAAGTTTTTTATATCTTGTTTATTTTTTTTCTGTTGAGCACTTTATGCTTTTTAGTCTGTTGCATTTGAGAGTGGTTTAGAAAGTTTTTCTCTTCTAAAAGCCATGTAAAAACCGATAAAGGATAATCACTAGAAAAATGAGTATGTATTATTTTGTATTTAACTTATTTGTTTTGTGGTATGTATAAGCAAAATATTAGAAATGTACTGCATTTTTGTAATAATACTTTTGACCTTAATTTAACATGATTTTCATGAAATGTCTCTGATGTCCTATTTTCCCAATAAGGTTGATTAGGGTGTTTTATTGTAATATGGAAGGAATTCAGCCAACTGTGTTTCTGTCATGAGATAATAATCTCAGAAAGTAATGTGCTTTATCTATATTACTGCCTGTTTTCAGTATTTGAGACAGTTGCTTTATATTTCTACTGAGCCTAGTAAAAGATTAGCAAAGGCCTCAAAAAATGAGTAATTTTTTTAAAGATATTTTAATAACCTATTGAAAATAATGGTTCCATGAAAAGTAAACCACTCCATCTTTTCAGACATATAATTTTGTTTTAATTTATTGTAATTGGAGGCTAATTACTTTACAATATTATGGTGTTTTTTGCCATACATTGACTTGAATCCACCACAGGTGTACATGTGTCCCCCATCGTGATGCCACCTCCCACCTCCCTCCCCATCCCATCCCTCGGGGTCATCCCAGTGCACCAGCCCTGAGCACCCTGTCTCATGCATTGAACCTGGACTGGCGATCTGTTTCACATATGGTAATATACATGTTTAAATGCTATTCTCCCAAATCATCCCACCCTCACCTTATCCCACAGAGTCCAAAAGACTCTTCTTTACATCTGTGTCTCTTTTGCTGTCTCACATACAGGGTGATCATTACCATCTTTCTAAATTCCATATATATGCGTTAGTATAGTGTATTGGTGTTTTTCTTTCTGGCTTACTTCACTCTGTATAATCGGCTCCAGTTTCATCCACCTCATTAGAACTGATTCAAATGTATTCTTTTTAATGGCTGAGTAATACTCCATTGTGTGTATGTACCACAGCTTTCTTATCCATTTGTCTGCTTATGGGCATCTAGGTTGCTCCCATGCCCTGGCTATTATAAACAGTGCTGCGATGAACATTGGGGTACACGTCAGACACATATACATGTTCAGTGAGTTCCACTTCCACAAGTTTAAATGCGTTATCTATCTCGTGTCTTCAGTGGGTGTGGGATCATAACTTGGCATTGTATTAGAAATAGCACCAGGAGCTGATGTAACGTCTTTGAATGTTATCTTATTTGTGAAATGAAGGTTTAATTTGTTAACACTGGGGAATGACTGGATAATCATCAGGATCCTGAGAAAGATAGTTGCTCCATTCATGGAAGCATTTGAGATGACAGCATTTGAGATTGTTCAGCTATGTGGCATCATGTTTTATAAAGTTTGTTTTATTTGTATCTGTTAAGAGATACTAACTTTTGGATTCTCACTAACAGAATGGTATTAGTTTTGTTATTGCCTGTAATGGCCAAGTAATAGATACACCTTAAAGTACTATCAAGGGGTTTTATATATATATATATATATATATATATATATATATATATAAACGTGTGTATATGTGTGTGTGTGTGTGCTTTAATCTGTAAAGCTATCTAGGATTTTATTGTGCTATAACTTCAAAATTATATGGGCATTATTAGAACTTTTACATTGTACAAAAAGAAACATACCACTAAATTTATGGATGTTTGAATGTTAAATACATTTGGGATTTTCTTCAGTAATCCTTTTCTTTAGTGTCAACCCCCTGGACTATAGCCCACTAGGCTCCTCTCTGTCCATGGGATTCATACTGGAGTGGGCTGTTATTCCCTTTTCCAGAGGATCTTCCCGACCCAGGAATCAAACCCAAGTCTCCTGCATTGTAGGCAGATTCTTTACCATCTGAGCCACCAGATTTTTGATCATTTTGAGTGGATACAGATGTGGGATAAACCCCTCCTAGAATTATTTATTGCTTTTGTCAAACACAATTCATAGTGGGATTTATAAAACGCAATGTTAATAACCTGTGAGTTGAAATATAATGGATTATAGTTATCTACATCAAATCTGATAAAGACCTAAAATACCTTTATCTTTTGGATTACCTGAGAATAATCAGACTGGGCGTGTATCTGACATTTCCAGCTTAATAAATTTAGCAGTGAGTTGATTTTGGGACTTCAGGTACTACAATTGGTACTGAATGATGTGTTTGAGAGGAAGTCAATTTTTTTTTTCCTTAAGAAAACCCCCTAAGTCTTAACATTCTGGCTCTTTCTGTAGTCAAGAGGTTATCTCTCTTTTTAGATTTTCAGTCTTTTTTTGCTGTAGCTGCCGTTAATTTTGTGTTTAAAGAACTAATGAGGAATATATTTTTCAAAGGAGTGAATAAAGTTAAAATTCAAGATTTTGAATTGTATAAATATGCAACTATGTTTCAAGATTTGCTGTTTTTTTTTTTTTTTTTCTATTTCTTAACATCTTCCATACATTGCAGTGCTTACAGTTTTCAGTAGCTTTCAGAGAAAACATTTCAGTTTTGTATAGTTTGTGGAATGTACATCAGTAATGCAGATCGTCTGAGATTATTTTAGCTATACATCGTATCTGAATCATGGATCTCATTCCTAGCAAAGTAGGTAGTCAGCACAGGTTTTAAGCCATTTTGAAATCTGCTGCTTTTTTCTGAGGTGCCCTTTTTAGTTAACATTTAGAAACAAAAGATAACTATATAGACCTAACATCATATTCTGGTCTCCTTGTCCCAAACGTAATTAATGGAATATGGATGTAAGTCAGGTTAAGATGTTTTGTCATTTTTTAAAAATACATTGTGTGCTCTGACTTTTTATTTGAACTAAAGTGAAATGATATAATGATTTGACTTTTTAACTGAAGTTGAATGGTACTTGTCTTAATTCTGTCCACTTACAGAGTCGAATCATACCTAGAATATGTTTAATTATACAAGCCATTTCCATTTCAGTTGCCTTATTCTGTCTATTGCATTGTTCTTGCCAAGTCTAACCTCTGTTATGTTGAAATTATTCTAACACTGAACCTGTGATGTAAAAATGTATGATGTGCTACAAATTTTATTCATAATAAACTAAGTTATAGCCTATTGTAACCTATAAAACATTTCTTGTAAATCATCTAATTTATTTTTTCATTTATGTACAGTTTATGTAAAAATTTAAAATATTTGTTGTGATCTGTTCTTTAAACATTCCCTTTTTCTTTTCCTTAAGTCTTATCTGCATGAAGGAAACTTGGGTTTTGCTTGTTGTATTAATTGGCCAACTTAAGTACTCTCTACCTTCTTTTCTATAGTTTAACTTTTTCTAGTATTGTTCATATTCTAAATAAATGTTAAAATCATGCTTTTTATTTCCTACTTGGCAAATAAATTCTCTAAGTTATTTACCATGTTATCTTTTTGTTTCTTTATTTTAGGTATTTTACTCCCACATTTCTACTTCAATTAAATACAAGGTTTTAACTGAAATTAACTACAAAGATCATCTGTAGTTGAAGGCTACATACATAGTTTTAAGTGTTTCATTCAAAATAAATTTATTCCAGGAGGGAAAGAAAGGTCTTATGTTGGCTTTTATATGTATAGCTGTATACATTTTGAAAGGAAGACATCTCTTTTCTGTTGACATGTTCTTTAAAGGCTTGTATTGTGTATTGAATATGGTTAATTTTTCTGCACCTAAAAGTCTTGATAATCTCCTATGCAAAAAGCTTAATAAACTTTTAAAATATTGCTATGCTTCTGGTTATAGGAGTTTTTAAGTTTTGTTTTCTAAAATAAACTTGGAAAACCTGACTCCTGTATTTTAACAATTTTAATAAAGAGTCCTGATCCCCTGTGTTTTCAGATTTCTTAGACACCTCTTCAGGTTTTCAGGACAACTGTTTAATACCTCAAAAAATGTATTTCAGTGAATTTTAAACTACTGGTTTTTGTTTAGTTTTTGATCTCTTTTTTGTAATCAAGTTTATTGAGATATGGTTTTAAGTACAATAATATATATGTGTGTGCATATATAAATGTTTATTTGGCTATACCAGCATGTGTGATCTTTAGTTGCAACATGTGGGATCTGGTTCCCTGACCAGGGATTACAACTGGGCCTCTCCCATTTAGAACGCAGAGTCTTCCCTGGACCACCAGGGAAGTTCCTGAAGTACAGTAATACTTCACTTCTTACGATTAAGTGAATATGATAAGTTTATGTACTCACGTAACCAGCCCTCCAAGATACTTCCATCATTCCAAAAAGTTCTCTTGGCCTCTGTCCTAGGCAGTCCCTTTGCCACCCCATCGCCTGCCAACCACTGATCTGCTCTGTTACTAGATTCAGTTGATTTTCTCTACAGTTGTCATGTAAGTGGGCTTGTACAGTATTTACCCTTTTTTCGTTTCCCAGTCCTCCATTCCTCCCACCTCTAAGGCTTTCTAGAGCTACTACAGGCAGACCTCAGAGACATTTTAGGTTCTTCCTAGGCAACTGCAACACAGCAAGTTACATGAATTTTGTTTCCCCAGTGCCGTGTGCAGTAGCATTATGTCAAAAAAAAAAAGTGTGAATACCTTAATTTTAGAATACTTAATTGCTGAAAAATGCTAACCATCGTCATCTGCATCTTTACTGAGTCATAATCTGCTGGTGGAGGGTCTTGCTGCAATGTTGATGGCTGCTGACTGATCAGTGTGGTGGTTGCTGAAGGTTGGGCTGGCCTTGGCAATTTCTTAAAATAAGACAACGGAAGTTTGGTAGCACTCTGAAAAGTGAAAGTTGCTCAGTCGAATCTGACTCTTTGCAATTCCATGTGCATGGAATTCTCCAGGCCAGAATACTGGACTATTCTGAAGGAAGGTAGCCTTTCCCTTCTCCAGGGGATCTTCCCGACCCAATGATTGAATCCAGGTCTCCCACACTGCAGGCGGATTTTTTACCAGCTGAGCCACAAGGGAGGCCCAAGAATACTGGAGTGGGTAGCCTATCCCTTCTTCAGCAGATCTTCCTGACACAGGAATCAAACCAGGATCTCCTGCTTTGCAGGTGGATTCTTTACCAACTGAAGTATCAGGGAAGCCCACGGTGAAATTTCTTTAAAGTTGGAATCAGTCTTCTCAAGCCCTGCCACTGCTTTATCAACTAGGTAATAATTCTGAATGCTTGGTTGTGGTTTGAGTAATCACTAGGAATAGATTCTATCTAAGGAAACCACTTTTTCCTCATCCATAAGAAGCAACTCTGCATCAACATTTTATCATGAGAGTTCAGTGATTTAGTCCCATCTCCAGGCTCCACTTCTGTTTCTCTTCTTTCCACACATGGTGTTTATACACACTGGCAGTTACTTCCCCTCCCCACCCCTTGAAGTTTTGAACCACTCAAAGTCATCCATGAGGATTGGAATCAACTTCCAAACTCCTGTTAATGTAGATATTTTGAGCCTTTGCCATGAATCACAAATGTTCCTAATGGCTTTTAGAAAAAAATAACCATTCACACTATGTCAAC EMBV3_19866 ATCTTCGAGGAGGAAATATCTGCCCAGGCTACAGGGGAGTTTGAAGTGTTTGTGGATGGG Gene GeneID:615288|SELV:NM_001163244:748_cdna Constitutive 0 NULL GeneID:615288 18 GENE SELV NULL selenoprotein V EMBV3_04365 ACCCCGCGGAGACCCTTCGAGAAGTCCCGCCTCATCCGCCAGCGCCACATCAGGGTCCGC Variant GeneID:533892|RPS9:NM_001101152:31_cdna 129^440 1 EMBV3_05386 GeneID:533892 18 GENE RPS9 NULL ribosomal protein S9 EMBV3_43207 GGGCCCTCACCATGGATAGCAAAAAGCGTATTGGCTGGCGGTTCATACGGATAGACACTT Gene GeneID:617701|BDNF:NM_001046607:68_cdna Constitutive 0 NULL GeneID:617701 15 GENE BDNF MGC133995 brain-derived neurotrophic factor EMBV3_32450 CTACACCGGCAAGGAGCTGCCCACCAACTACAATGAGGCCAAGTTCATCACCTTCTGCAT Gene GeneID:529847|TAS1R2:XM_002685737:474_cdna Constitutive 0 NULL GeneID:529847 2 GENE TAS1R2 NULL taste receptor, type 1, member 2 EMBV3_11568 TCTGGCTTAGGAGCGCCCATCAAGCTCTGGGTGTTCTGGGAAGATGGTATCATGTCTGGC Variant GeneID:516498|PAQR6:NM_001046225:150_cdna 125^200 1 EMBV3_23382 GeneID:516498 3 GENE PAQR6 MGC137682 progestin and adipoQ receptor family member VI EMBV3_11233 CTCTACAAGATGGCAGAGTAGAAGGACATGTGCTCATCTTCTCCTTCAAGAAAACTAAAA Gene BVT0102_438219 + 1 EMBV3_12195 GK000003.2:93625435-93674235 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31635 GTTTAAAGCAGTGCAAGTCCAGCGGAGAAAAAACCAAAGAAGCGGGCACTGATAATCGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05681 ACGGCAAAAATGAGTAATTCCCAAGGGGATGGTGAACATTTTGCACACCCAGCGTCAGGC Gene GeneID:513777|CCDC104:NM_001034453:101_cdna Constitutive 3 NULL GeneID:513777 11 GENE CCDC104 MGC128282 coiled-coil domain containing 104 EMBV3_38993 TCTTTGCAAGATGTGCGACAAGTCCTACACGCACCCCAGCTCGCTGCGCAAACACATGAA Gene GeneID:516827|ZIC1:XM_002685012:158_cdna Constitutive 0 NULL GeneID:516827 1 GENE ZIC1 NULL Zic family member 1 (odd-paired homolog, Drosophila) EMBV3_36243 CGAAGTGCCCTCTGTCTACTTCGGGACCAATGGGTACTTTTCCTTGGGATAAAGAAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11277 TTGGCGCTGTTTGATCACGCCTATGCCTCCCCTTTTGGCACCTTCCTGTGCAACAATGAA Gene GeneID:521746|MTMR9:NM_001046256:118_cdna Constitutive 0 NULL GeneID:521746 2 GENE MTMR9 MGC129119 MTMR9L myotubularin related protein 9-like EMBV3_21286 AGATCCTCCCTCAGTTTATCTTCAATTCTCGGGATCCGATAGTGATGGGCGTGACTGTGG Gene GeneID:614207|LOC614207:XR_084141:37_cdna Constitutive 0 NULL GeneID:614207 X PSEUDO LOC614207 NULL similar to Eukaryotic translation initiation factor 5B (eIF-5B) (Translation initiation factor IF-2) EMBV3_34741 GACAACAGGGTTCTAACTGCAGCTTTGCTTCCAGGGGGGTGACCTTGAACCAAGTCATTT Gene GeneID:614253|IRF6:NM_001076934:111_cdna Constitutive 0 NULL GeneID:614253 16 GENE IRF6 MGC143192 interferon regulatory factor 6 EMBV3_38705 AGATGTGCAGCAAGGACAGAATAAATCTAGGAAAAGTGAAAAGTTTCATCCAGTGTTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35427 ACCATGATCTTCGTCACCCTGTCCATTGTCATCACCGTCTTCGTGCTCAATGTCCACCAC Gene GeneID:531838|CHRNA2:XM_002689795:27_cdna Constitutive 0 NULL GeneID:531838 8 GENE CHRNA2 NULL cholinergic receptor, nicotinic, alpha 2 (neuronal) EMBV3_14916 CTGAAGAGCATCAACAGCATCAACTTCGACAACCCCGTGTACCAGAAGACCACGGAGGAT Gene GeneID:281276|LDLR:NM_001166530:276_cdna UTR3_Alt 3 NULL GeneID:281276 7 GENE LDLR NULL low density lipoprotein receptor EMBV3_37692 AGGACAAGCCACCGTCCATCGAAGACAAGCTTCCAGCCGACTACTTCATTCTCCATTCCT Gene BVV0101_009047 + 0 NULL GK000019.2:23378707-23382434 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095811 TCONS_00095812 TCONS_00095810 1 XLOC_057801 NonCoding TCONS_00095812 XLOC_057801 NonCoding NonCoding MIR22 19:23379595-23388941 o TSS71339 2699 3 TCONS_00095812_2 46 0.295665061133753 5 0.711717495987159 0.000782640645703677 0.000691406960707413 0.000962976577241703 0.000332108303461608 0.000473462813629698 0.000740853676356036 0.000221111396573391 0.00013904177007778 0.000505531065902661 0.000105488840847783 0.000145863486174128 4.3686792151354e-05 1.16938389493533e-05 0.000329394312744199 0.000136397180072833 0.0014312026952941 0.00033202733825038 0.000734201232832025 0.0008989557003785 0.000181412281850832 3.13514202476299e-10 0.000233635049322037 0.000737516783437328 0.000496767264036478 0.000468859231431829 0.00046889416492317 0.000413028934890529 2.12667541705841e-05 4.35113418757054e-14 3.33580370960506e-05 XR_228638.1 LOC101905520 PREDICTED: Bos taurus uncharacterized LOC101905520 (LOC101905520), 0.0 901 100.00 0.184512782512042 NR_028503.1 MIR22HG Homo sapiens MIR22 host gene (non-protein coding) (MIR22HG), 0.0 796 76.23 0.426824749907373 0 noncoding 0 0 0 0 -0.148175644182944 0.259067883282884 0.0508098701872386 0.288475569808874 GAATACTGAGGAGAGTTCCATGTGCTGTATGATGAGGAAATTGCGGCTCAGAGATGTGAAGTATCTTCATCGAGCTTACAGGTGGTGAAGACTGTGCTATAAATCTTTCGTTGGGAAGCTGCTGCTTGACAGGCTTTGTCTCTCTGTGACTGGGGCAAGACATCTTCTACCAGAAGTTTCCTCTGATTAGGAAGGCCCTCCAGGAGGAGGAGTGGATTAGACCTCTCCAAGAGAAAGCTGAGGCCAGCGGAGGTGGGCAGTCCTCACTCCTCCAAAAGTTCCCAGGAGTCCTCATTTCAAAGGAAGAGTCTGTGTGCCCTGGGGCTGATTTCCACCTTCAGTTCTCACTCCTGCAGCCTCTCCTGCTCTTCCTGAGAGAAACATCGCCTCCTGCAAGAGGTCAGTGAATCCGTTTGGGGGCTGTCTAAAAGAACCACTCACAGCTCCGAGAAGGAGGGGCTGTAGCCCTTTAAGGAGTTCGCCGGGATGGATTCTGAGAGGAGTTTAAAAATGCCAACTCACAGAGCGCGCTGGATTCTGGGAACGAGGTGTCAGACCGAGAACTACATTGACCAGTATGCACCGCAAACACACACGCCTCGACTTCCTTCTGCACTTTAGGACTCGGGTTTGACGTAGCGCCCCTCTAAGCAAGTAGCTTAGACGCAGGGCTAAGCCACACCTTTTTACCTATTGGCCAGCTCTCGAGTTGGTGGGCGTGGCTTAGCCTTACTCCACTCGGCAAAGGGGTGGCCTCCTTGCCAATCAAAGCTAAGACGGCCAGGGAGGCGGGACCAAGGCGAAGCGCTGGCGCCCCCGAGTGGGTGTAGTCACGCTGCCCAGCAGTGGGCGGTGATTGGCCCTGGGCCGTGCAATCGCAGTTTGTGCGTCACGACGCCGCCAGCTGATCGGAGACTGGAGCCGGTGTGTGCTGGGCGCTGGGAAGAGACAGCGCCGCCGGCCGTGGGGATCGGACGCACTGATTTGCTCCCCTACCCTCAGCAACCCCCCCCACCCAGCACCAGGAACCTGTGCCTCCCACATCCTCACCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCTTCGAGGAGGAGGAGGAAGAAGAGGAGAAGGAGCTGCTTTCCCCCTCTGGAAGTGTCTTCATCCAGCCTTGGGTACATGGCTCTGCCATCCTCACCCTTCATGGAGCAGAAATGAGGAAGAACAGCCTGAAAACACAGAGGCAGACAGAAGACCAGTGAAGGACCAGGCCTGGAGAGCACAGGGCCCTGTCTGGACATCCTGCAGAGGGGGGCCCGTAGAGGCCAGGAGTGCCCCCAGGAGGAGGGAGGACAAGCCACCGTCCATCGAAGACAAGCTTCCAGCCGACTACTTCATTCTCCATTCCTCTCCAGTCTTTCTGCCTCCCTCAGAGACGTGGGACCATGTTGAAGTGTCCTTGACTTCATCCTCCTGCTCCCACCTCTCCTCACCATGTAATTTGTCTATAAGCACCGTAGAGGAGCAAGAGCCAGCTGTGAAAGGACATATGCAGAAAATTCATAAAAGAAATTCCGATAGATAAAACCATGGAAAAAGGTGTGCTTCGTTAGTAATTAAAGAAAGGCAGCTATAGCTGGAAGCATTTTTTCCTGTAGCCAACTATAAGAGGAAAAACAAGACCCAGTTATTGACAAAGAAGTACTAAAATGACACTCTCATATGTTGCACATGGGTATACAAGTGGGTAGTCTTACTGATGTCAGTTGGGTAATGTGTGCCAAACATCCTAAAAGTTTCATGGCCTTTGATCTAGTAATTCTATATTTGGGAATGTATCCTAAGAATATAATTAAAGATTAGTAATAAGATGTTCATCCCAGCAATGCAGTAGGAAAAATTGAGAACCAACTATCCGGTTGGGAATTCATTTCTTTTTCTACTGTGATGAAAATTTGCAAGAGGGGGTTGCTTGAGTAAATTGTTATGGATCCACCCAGATGGTGGAACACTGCGCAGCCATTAAAAGTCATGTAGGAGAGGATTTGACTGGAAAGAAAAATGCTCTCTGAATATTAAAAAGGTTATAAAATGATATGTATTATGTGATCTCAATTTTGCTTTTTTAAATATGGGTGTATACTTATAAGACAGTTTTAAAAAGACTGCAGACATACTCCAAATTGTTAATAATAGTGGTTATCTTTGGATGATGGAATAAAGTTGTAATTTTCCATTTGGTTTTCTGTAGTTGCCAAATTTTCTACATTAATCATGTATGGCTTTCATATAATAAATAAGATTTAAAAGAATCAGTGTAATTTTTAAAACTTCTGGAGAGGTGGGTGTGGAAGAATGAAGAGATCCCCCCAGCCCCATTCACATAATAGGGTTTTGGTGGAGGAGGGGAGTTGTGAGAACATTTGTGGGAGCACCTATTGCTTTATGAATTTTATTCTTTGGGAGTAGCTGGAATCCACTCCTTGTACAGGGAACAGCTGTTGCGCTGACTTGGTGGCAGCCACCTAAAGAGATGTAGAGTGGATGGAGTAAAATGGAAAACAGGAAGAACCTGTCACTCTTCAGAAGAGGAAAAGTTCCCCGCCCCCAAAGCTGAAAGCTTCTGTATAATCCTGACAGTCCTGCTTCTGAAAGCAAG TCONS_00095808 s 5' 876 TCONS_00095814 s 5' 0 EMBV3_37024 CCCTGCCATGGACTGTACCCTTTGTTGGCTGATGCTATGACGATGGCACTTCCTCCAATT Gene GeneID:509502|PTCD3:NM_001046034:65_cdna Constitutive 1 NULL GeneID:509502 11 GENE PTCD3 MGC137113 Pentatricopeptide repeat domain 3 EMBV3_29206 GCCAGGAACACTTCAGGGCAGCAGAGGACTAGAACGAAGAGCCACAACAGGAAAAACAAC Gene GeneID:524274|XPC:XM_002697128:57_cdna Constitutive 1 NULL GeneID:524274 22 GENE XPC NULL xeroderma pigmentosum, complementation group C EMBV3_33078 GCACAATTAGCTTTGGGAGGTTTTGTGTGTGCCGTTGTGTTGTTTTATAGAGCCAGGGTC Gene BVV0101_007567 - 1 EMBV3_19825 GK000011.2:72102942-72149848 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41294 GGAAGATGCCCACGCAGATCCTGAAATCCAGCCTATGAAGGAAGATGATGGCACTTTTGG Gene GeneID:534500|NRCAM:XM_002686781:99_cdna Constitutive 0 NULL GeneID:534500 4 GENE NRCAM NULL neuronal cell adhesion molecule EMBV3_31850 ATCTTATAAAAGTTACAGTTGCACCATTTGATCCAGAGTTACTGAAAAACCCTCCTCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10617 CTTGACACCTGGTGACTTCTGCTTGTGGTCACATGCCCGCTTGCCTCTATCAGACACTGA Gene BVT0102_233863 + 0 NULL GK000018.2:13964623-13969300 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15071 CTTCCTAACTCAGTGAAACACAGTAAACCACGCTCTCCCGCAGCCACACTTAGGGATCGA Gene GeneID:615342|BNIP3:NM_001076366:8_cdna Constitutive 0 NULL GeneID:615342 26 GENE BNIP3 MGC134178 BCL2/adenovirus E1B 19kDa interacting protein 3 EMBV3_41939 TCATCGTGAAAGCCATGAGTGATTACTGGGATGTTGGGAAGAAGACTGACCAGAGGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18060 ACCGTAGGGTGCCCAATGGCAAAAAGTCCCCATATCTAGACACGTACTGAAATTAGGAAT Gene BVT0102_174762 + 0 NULL GK000009.2:61240862-61249661 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12873 CAAAGACCTTTCCAAAGTGAAACTGATGAGATTTGACGATCCAGTGTTGGGGCCTCGGCG Gene GeneID:509429|LARS:NM_001102492:2_cdna Constitutive 0 NULL GeneID:509429 7 GENE LARS MGC143255 leucyl-tRNA synthetase EMBV3_09724 AGCTGCTCCTGAAAAGCTCATTAAACCAGAAGGTGACCAGCAGAGGTTTTGAAGCCACTC Gene GeneID:100336460|LOC100336460:XM_002690632:17_cdna Constitutive 0 NULL GeneID:100336460 10 GENE LOC100336460 NULL hCG2039694-like EMBV3_03305 CTGGAAGTCCTAGGGGCCAGATTAATGAAGAGGAGCACAAGGTTTAGAAAATCGACAACC Gene BVV0102_410176 - 1 EMBV3_02419 GK000002.2:18449879-18476152 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41051 CCGGGCTGTGGAGGACCTGCTGCCTAGAAGGGGCTGTGAGGGCCTCCAGCGTCTTCCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40454 CCAGCTCCTGCATAACACATACTCCCTTCATTCCCTCCCGCCAACACTACAACCATTCCA Gene GeneID:767924|MGC128424:XM_002689298:146_cdna Constitutive 0 NULL GeneID:767924 7 GENE MGC128424 NULL hypothetical protein MGC128424 EMBV3_33855 CGGAGAGAGGGCTCGGCCGCCGGCCCGGAGTGGTCTGATTCCACCAAGAGAAGGCCCAGG Variant GeneID:533228|RILPL2:NM_001083718:234_cdna 392^543 1 EMBV3_22025 GeneID:533228 17 GENE RILPL2 MGC151657 Rab interacting lysosomal protein-like 2 EMBV3_30316 CATATCTAGGGCTAGTACTTAACGTTTCACACCCGGGAGCTGGGAGAAAAAACCCTGTAC Gene GeneID:617975|H1F0:NM_001076487:109_cdna Constitutive 1 NULL GeneID:617975 5 GENE H1F0 MGC139771 H1 histone family, member 0 EMBV3_40881 ATCAGGGATGCTTTTCTGGGTGTTGGGGTGCGCAGGCCCCAGTGGACGGATAAAGTGACA Gene BVV0102_320542 - 1 EMBV3_13096 GK000005.2:121047267-121056749 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05613 GGTGGGAGGCAGGGGGCAGGCTTGGGGATGGGTGAAATCGTGTTGGCATTATTTTTTAAT Gene GeneID:507102|SREBF2:XM_002687950:39_cdna Constitutive 2 NULL GeneID:507102 5 GENE SREBF2 NULL sterol regulatory element binding transcription factor 2 EMBV3_01299 GTGACCAGCCGCCTGCCTCAGGTAATGTGACTGGAAACAGTAACTCCACGTTTATTTCCA Gene GeneID:530884|TNFRSF11A:XM_002697844:561_cdna Constitutive 0 NULL GeneID:530884 24 GENE TNFRSF11A NULL tumor necrosis factor receptor superfamily, member 11a, NFKB activator EMBV3_30346 CTAACATTCGGGAAGCTGGGAATGTGTAGCCCCGGAGGTAAAGGCCTATGGTTCAGTGAA Gene BVV0102_436921 + 0 NULL GK000002.2:105397647-105576567 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27620 GGCAGGGAGGCTTAAGAGGGAGGTGATATATGCATACATATAGTTGATTCACTTCATTGT Gene BVT0102_352078 - 1 EMBV3_03455 GK000014.2:23886643-23990192 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33967 CAAGCTGCTCTTCCTGCCCCGCCGAAGCCGAGCTGCCCCCATCCGAGTTCCTGCAAGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03257 AATGGCTACCCACTTCAGTTTTCTTGCCTGGAGAATGCCATGGACAGAGGAGCCTAGTAG Gene GeneID:505184|SERPINB2:XM_002683805:29_cdna Constitutive 0 NULL GeneID:505184 24 GENE SERPINB2 PAI2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 EMBV3_35443 TTAAAGCCCGGCCGGCTGGAGCCCCCCGCCCCGGTTGGCGCTTTCAGTTTAGCCCTTTCT Gene GeneID:100337354|LOC100337354:XM_002691537:587_cdna Constitutive 0 NULL GeneID:100337354 11 GENE LOC100337354 NULL SOX11-like EMBV3_24009 CTTTTCTGGTGGTTTTGGGTCTTTGATGTGGCGCACAGGCTTCTCCACTCGTGGCACAAG Gene BVV0102_085609 + 1 EMBV3_33435 GK000012.2:55049534-55591838 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39265 TGTATTTATTCAGGAGGTCAAGGTGTCCTGGGAGACACAAACTAAGGGCTGCCTTGGCTC Gene GeneID:280943|TNF:NM_173966:24_cdna Constitutive 0 NULL GeneID:280943 23 GENE TNF TNFa tumor necrosis factor (TNF superfamily, member 2) EMBV3_37468 AAGCGCCGGAGGGTGTCGGATTGTCCTGCAGAAGACGCACTTGCCTACTCAGATTTTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06238 CTCCACTATAAGCTTCCCAATTCTGCCCTTCCTGAGGGTTTTGAGCTGTATCCCCAGTTG Gene GeneID:531362|RPAP1:NM_001077984:169_cdna Constitutive 0 NULL GeneID:531362 10 GENE RPAP1 MGC139959 RNA polymerase II associated protein 1 EMBV3_39034 TGTCGGCGGCCAGGACAAAATCAGACCTCTGTGGCGACATTATTTCCAGAACACACAAGG Gene GeneID:282601|ARF4:NM_174689:191_cdna Constitutive 0 NULL GeneID:282601 19 GENE ARF4 ARF2 ADP-ribosylation factor 4 EMBV3_00754 TGCTGCAACCTGTCGGATGTTCATGGAGAAGCTCTGTACTACTCTGTTATGGCTGTGTCC Gene BVT0101_002396 + 0 NULL GK000019.2:48638221-48661969 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097444 TCONS_00097443 TCONS_00097440 TCONS_00097441 TCONS_00097442 1 XLOC_058248 Coding TCONS_00097440 XLOC_058248 Coding Coding CCDC47 19:48661125-48673075 j TSS72196 1933 1 TCONS_00097440_1 132 7 0.83881496359528 5.38345774664359e-08 0.000627845725834217 0.000239402388734298 0.00101720444320462 1.39067383238704e-09 7.72743202786935e-05 0.00078310012509374 0.000790714355936219 0.00128684591974613 0.000130334206641445 0.000360143424281691 6.49880311219727e-05 0.000419128500523109 0.000325880301863618 0.000337438228384914 0.00579192683788496 0.00229637358215517 0.0127084776676235 0.000730496135570402 0.00196289413303129 0.000137249305045238 0.00687601718163303 0.00544945426691556 0.00484099722857744 0.0007897669008871 0.00114547879824728 0.00139421080062699 0.000995116048983493 0.000337199852993371 0.000987516927445989 NM_001035428.1 CCDC47 Bos taurus coiled-coil domain containing 47 (CCDC47), mRNA. 0.0 980 99.82 0.282979824107605 NM_020198.2 CCDC47 Homo sapiens coiled-coil domain containing 47 (CCDC47), mRNA. 0.0 1440 83.36 0.718572167615106 TCONS_00097440_1 sp|Q3ZC50|CCD47_BOVIN CCD47_BOVIN Coiled-coil domain-containing protein 47; 1e-84 259 99.20 0.939393939393939 1 coding 0 0 0 0 -1.31530102448653 0.0143159281902614 0.00744386103246086 0.882014660957619 GATCCACTGCAGGGGTGTACAATGGAGGACCTCAGAGGAGGCCCTGTCACTGTGGGATGATGGAACCAACAAGGAAGCCACCAGCACAGGAAAGCTGAACCAGGAGAATGAGCACATTTACAACCTGTGGTGTTCTGGCCGGGTGTGCTGTGAGGGGATGCTTATCCAGCTGAGGTTCCTCAAGAGGCAGGACTTACTGAATGTCCTGGCCCGGATGATGAGGCCAGTGAGTGATCAAGTGCAAATAAAAGTAACTATGAATGATGAAGACATGGATACCTACGTGTTTGCTGTTGGTGCTCGGAAAGCCTTGGTGCGACTGCAGAAGGAGATGCAGGATCTGAGTGAGTTTTGTAGTGACAAACCTAAGTCAGGAGCGAAGTATGGACTGCCTGACTCCTTGGCCATCCTGTCAGAGATGGGAGAAGTCACAGACGGAATGATGGACACAAAGATGCTTCACTTTCTTACACACTATGCTGACAAGATTGAATCCATTCATTTTTCAGACCAGTTCTCTGGTCCAAAATTATGCAACTTTAGGAAGCTGCTTTGAGGCGTGAGCAAAAGAAATTGGAGAAGAAGCAAATGAAGATGAAACAAATCAAAGTGAAAGCCATGTAATAGCCATCCCAGAGAGCTAAGTCCTAACGCCACCTTTAAGTTCAAAATTCACAGGAAACAAAAGCTACCAATTCGTTTCTCATCTTAAAGTTTCCCTGTGACTGAGAAATCCTTATTTCATCACCTGTTCTGTTTTGGCTTGGAGTGTTACAGAGGTTATAGATACATTGGAAGGGGTCTGTTTCAGTCATTTTCTTCCAGATAGTCAAATTATTTTGATTATTTTATAAAAGGAATGATATATGAAATCTGTGTAGTTTTAAAACATTTAAAAAATTATAACATGAATCATAAGTACTTTTAGTGCTTGATATTTGAAGAAATATCATGAAATTTATAGATATATAATTAGATTGCTGCTTTTTTGTTTAAGCTAGGCAGTTGAAATAGCAATGAAGATTGACTATAAACCACAATTCCACAAATAACAATTGGAATTACACAATAAACATTTCTTGGTGTTCTCTTCTGTGTCTACATTAAACTTGTGAAAAAAAATAAAATTTAGAACACTGTATGTGGTATGGAAATTTCAGGGACGCAACAGTCTAGTTTAGTATATGTTTATAGGTGGGAGGTGCTTATGACAGTATCATAGGCTATCTGTAGGCTTTAGGATACTTACATGTACATGGAAACTTCTAGGGATAGGAAGAATAGGAGCACGGCTTTCTCCTTACCTGATACAATGAGCTCATGACAATGTGAATGCTGTATTTTAAGTGGCTGTATGTTTTCTTGAGTAACAAATGCATGAAAATTACCTGCTTCACCTAGGTGAGATCAGTGGTCTGCGTGAAGTCAACAAAAGTTCTCCTTGGTTGCTGCAACCTGTCGGATGTTCATGGAGAAGCTCTGTACTACTCTGTTATGGCTGTGTCCCTGTGCTTCTCCTTCTGCTTTTATATCTTCCACAGTTGAGGCTGGGTATATTTCTTCAAAGAAGTAGCCATGAATATGCATAAATATACTTTTTAACATGAGCTTTCCTAAACTACAGAGAGTTCTTCCTGCCTCTTGAGGAAGGAACTCTTGGGGGAGAGGCCCATCTGTTCTGCACGAGCATTTAGCTTGTTCAGATCTCTGCATTTTATAAATGCTTCCTACTAAGAAAGCATTTTTTAAAGTCACTGCTTGTACCAGGTAATTTTTGCTGGGGCTGGGAAAGGGTTGGGTTTTTTGTGGGAGAGGGGTGGGTGGGTATTTTTTGTTGATGCTGTATGTGCCAGTGTGTTCCGAGGCAATAACAAGTTGCTGTGAAAACAGCATGTGCTGCTGCCTTTGTAACTGCATGGAAACTCTCCACANN EMBV3_29343 AGAAGGGGAGAGAAGTAACGCTGTAACATGAGAAGCCTGTTCAGAGGCAGTGGAAATAAA Gene GeneID:533090|POLG:XM_002696564:162_cdna Constitutive 0 NULL GeneID:533090 21 GENE POLG NULL polymerase (DNA directed), gamma EMBV3_27764 TGTGTGCACCCCTTTGTTCATAGCAGCACTATTCACGATAGCCAAGACATGGAAGCAACC Gene BVT0102_112583 + 0 NULL GK000008.2:62014123-62021938 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225563 TCONS_00225562 1 XLOC_137781 Coding TCONS_00225563 XLOC_137781 Coding Coding POLR1E 8:61998250-62021028 = TSS168842 8428 1 TCONS_00225563_4 419 0.3890602752729 12 0.630504456249726 0.000242495216886202 0.000481484221652583 0.00025098627852939 0.000467180801364017 0.000143474757429611 8.11336081917578e-05 0.000245039887071414 0.000318919341827357 0.000538764338108066 5.21164475972544e-11 6.25777594416015e-06 6.44747617279093e-11 4.31259134092766e-09 3.26607371031361e-11 4.56707719937303e-11 0.000159669331058295 1.21629830324044e-05 0.000321942598705463 0.000683729238364637 0.00102917365944665 0.00070247042137538 6.19137000120849e-05 3.95017333523571e-05 3.8469274946346e-05 0.000958733894094351 0.000588921879849782 0.000352901624540414 3.81882483915297e-11 2.14406380659528e-11 3.42742255599425e-09 NM_001034408.2 POLR1E Bos taurus polymerase (RNA) I polypeptide E, 53kDa (POLR1E), mRNA. 0.0 2652 100.00 0.174299952539155 NM_022490.2 POLR1E Homo sapiens polymerase (RNA) I polypeptide E, 53kDa (POLR1E), 0.0 1709 88.24 0.159349786426198 TCONS_00225563_4 sp|Q9GZS1|RPA49_HUMAN RPA49_HUMAN DNA-directed RNA polymerase I subunit RPA49; 0.0 732 84.82 0.988066825775656 1 coding 0 0 0 0 -2.77261816001865 0.0205363123369973 0.012962114266619 0.79735922595146 CACTCCTCTTCCGGCCCGCCGCACTTTTACCGCGTGTAGCTGCAGCTGTTTTAACTCCGGGGATTGGCGGCTAGCGAGGCGAGATGGCCTCGGAGGTGTTTCCGAGTGCGAGGTGGCAGTATTGTGGGGAGCCCGACGACAGCCAGAGCGCTCTGCTGGTCCAGTTCTCCAATGGGAGGCTACAGAATCCAGGCAACATGCGCTTTACCTTGTACAAGAACAACGACTCCACAAACCCCAGGAAGAGGAGTCAGCGGATCCTGGCAGCTGAAACAGACAGACTTTCCTACGTGGGAAACAATTTTGGGACTGGAGCCCTCAAATGCAATACTCTGTGCAGGCACTTTGTGGGAATTTTGAACAAGACCTCTGGCCAGATGGAAGTATATGATGCTGAACTGTTCAACATGCAGCCACTGTTTTCAGATGAATCAGTTGAGAGTGAATCAACACCAGAGAGTCAAGCCAAATCTTTCAGAGAAAAGATGGATTCTTGCATTGAAGCCTTCGGTACCACCAAACAGAAGCGAGCTCTGAACTCCAGGAGAATGAACAAAGTTGGCAGTGAATCTTTGAATCGTGCAGTGGCTAAAGCTGCAGAGAATATAATTGATACAAAGGGTGTGACTGCCCTGGTCAGTGACGCCATCCACGATGACTTGCAGGATGACTCTGTCTGTCTCCCTCCCTGCCACGCCGATGCAGCCAAGCCTGAAGACGTGTATAAGTTTGAAGACCTTCTTTCCCCTGTGGAGTATGACGCTCTTCAGAGCCCATCTGAAGCATTTAGGAATGTCACCTCAGAAGAAATACTGAAGATGATTGAAGAGAACAGTCACTGCTCCTTTGTCATAGAAGCCTTGAAGTCTTTGCCATCAAATGAGGAGAGCCGAGACCGCCAGGCGCGGTGCATATGGTACCTGGACGCCCTCATCAAATTTCGAGCACAGAAAGTGATTAAGCGGAAAAGTGCCCTGGGACCCGGAGTCCCCCACATCATCAACACCAAACTACTAAAGCAGTTCACCTGCCTGACCTACAACAACGGCAGTTTGCGGAACTTAATTTCAGACTCTATGAAGGCAAAGATCACCGCCTATGTGATCGTACTGGCCTTGCACATAAATGGCTTCCAGATTGACCTGACAATGTTACAGAGGGACCTGAAGCTCAGTGAGAAAAGGATGATGGAGATAGCGAAAGCCATGAGGCTGAAGATCTCCAAAAGAAAGGTTTCTCTGGCAGCGGGTGGGGAGGAGGAGCACAGACTGGGCACTCTGTCCATCCCGCTGCCTCCAGCCCAGTCCTTGGACCGTCAGTCAAAGCGAAGGAAAATGACCTAGAGGTGTGCGTTCCCAGACACAACATTTTGGCCACTCCTTCTGTTCATTTGCATTTTTATTTTTAAAGAAAGAGGGTTAAAGAAGAAGCCTTGCTTTGGCACGGGCATGAAGCCAGATGCCAGCACCTCAGTTGTGTTGGTCTGAAGCAGAAACATAAAGCAAGGCCCTGTTGGACTCTCTGTCTCTGCTTTGGTGTCACTGTGACTATAAATGGCAGATGGTTCATGTGTGGGATGTGGGACGGTCGGAGGCAAAAGATCTCACAGGCTGAACCTTGAGCCACATCTAATGGATAAAGGTTAACATTAAGAGAAATGTGAAATGCTGTGCTTAGGTCTGGAAGGACCACCGGCGTCCATGGTGAGGACAAAGCCCAGCAGGGCTGGGAGAGGAGGCTTCAGGTCACCAGTGTGATGGGGTTGCCCAAACATGCTAACTTAGTTCTGGGCTACTAAAACAAAGCAGAACCAAATCAGAGGAAGTGATTAAATCAGTTGCTCAGCTTGGCTCAGGCCACACACAGGGCAGGGGTGAGCCTTGAAAGCCAGTGAATTAATTGGTCAGAGCTCAGTACAGAAAACAAATGGTCCTAGATGTTCTTAAGGAGAAAGGAGTTTAACACATGGACAAAATGGTACGAAATTGTTAAAAAGTTGCAGGAGCTGGTGTCAGGAAGTTGCTGCTAGAACTGCTGAGTTCAAGAACACAGCTTGGGTGGCTGGCCAGGCATGAAGAAGCCACTTGAATTCATGAAGCTTCTTGAATTCAGCTGCTTCCGGAATTCATGAAGCTGGTAACTTGAAACTGGAATGCTGGTTCAGCCACCCATACTTTCAGTATCCAGGCTTCCACCTCCTGGCTTGTCAGCATGGACAGCCCAAAGATCAAGAGGCTGGCCGCCTACCTTGCTTCCTTCCTCTGTGAGTACACGTGTAGGGATCTCATTTCGTCCAGAATCCTAGCAGTGAGGGTGTCTTAGAAATAGGTTTCAGCTCTCCAGCCTCTAGTTACAGGAAGCCATACCAGAAGCAGATGGGAAGGGGTGCTTACTGCCACCCACCTTATCTGCCAGGGGAATATGGAGAAGTGGTGTCCAGAGGGTTGCTGTGAGGAACGGGACTGTGACACAAAGTCTCAAGTATATGGCTGATGCTCAGACTCAGTTCTTCAAGGTTCTCCTGAGGCAATGGGAGCAGTGCAGTATGTGGGGCTCATGCTGGGGGGCCGGGGGCAGTGGAAGAAGGAAGAGAGAACCCACCTCTCTCTGAAAATGAGAAAGGAAGATGTTTACACAGCAGCTGGGCCATCTGTTAGGGAAGACATAGTAGAAATGGGCCTTGGATGATTCATTCAGGGCATGTGATCCTTGTATTTCTTCGATTACTGGGGTGCGGCTGTCAGAGTCACTTCTAACACATGACCAGGCCTGAAATGCCCATTTTCCATGTTCTTGTCTGGCTTGTCCCCATTTGTGTCTGATCCTGGGAAGCGGGCACTTCCCTCCAGCAGAGGTGTGAGCAGGAAATCTAAATGCCTGTTATTTTTCTTTATCTAAGCTGTTGCAAAAATCAGGTATGTGACTCTGCATCATAAAAAATAATAATCCTGATTTGACTTTGGGAAAAGAATCCCTAATGTGTTTGCGGGTGTCATCATGAATACGTTTAGATTCTGATGGTTTTGACACCTCAAGGCTTAATTTCCAGCAGTGATTAGATCACAGCATATGACTGGCCTCTGAGCAGCCTCTGTCCTCATGGGGAAGCAGGCACCGTGTGGGTCACTTCCGTCACTCGCACCGAGGGGTGGTGTGGATGGGGAAAGGCCTTGAGTGGTAAGTATACTGCTGACCCTTGAAAACATGGATATGAACTGCTTGGGTCCACTTAGACGTGGACTTTTTCCAGTAGTAAACACTACAGCACCACATGAGTGGTTGGTTGAACCTGCAGATGTGGAATCACAGATACAGGGGCTGGCCTGAATCATATGTGGATTTTGCAGTTGTGTGGAGGGTCGGTGCCCCTAACTTCTTGCGTTGTTCAGGGGTCAGCTGTATACTTGTCCTGGGTGACAACAGGTGTACTTCACTAAGTGTAGGTGATGCGGTCCCAAGAGACTGAAAAGCCAGTTTTCGCACATCAAAGGGTTTGTGGATCAGAAGGCTCAAAAGGGGGCCCTTTCCAACAAGTCTCGAGAGAGGGCGCCTAGCACAGTGCCCAGTATATAAACAGCAGTGTCCGGAGTGAGCTAGAGTCCATAAGTGGCACCTTCTTTCCTTGGCAGAGCTATCCGGCAGTACACACTTGTAGAATAATGGGATTGTACTAGGTTTTTCCTGGCTCTCAAACCCCACTTATTTACTAATGCATTCCCAGAGGATTCCTTGATTCCACCAAGTTACTTGTCATAATCGCTTGATGATCTCTTTGAAGAAAAACAGACTGTGGGCTAGAGGCTTATACCCTTAATAAGATTTGCAGTTTGTGGAATAACTTATAGAATGTTAACAGAATGAAGTCTTTTCCTTGGAGGGAAGTGGCCCTGACCTGCTGACACTGTTGACAGTAATGAGATCAAAGAAGGAATATTTAACATCCTTGCAGAGGACTCAACATAAAAAAAACTAATTAGGTAAAAATTTTTAAAGCATCTTCTTTTAAGAACTTTATTTTTATATAATGTCGTACTTAGAAAGTTGCAAGAATAATTACAGTCATATACAGAGAACTCCTGTATATCCTTTACCCAGGCATTCCAACTGTTTATGCGTCATCCTGTTTATTTGCTTTGTGCACTTATATATTTCCTTTTGAACCATTTGGGACAGTTTGAGAAAAGCACCCTTTTTATCTTAAGTACTTCGGTGTGTATATCCTAAGAATAATGAGGCCTTTCTCTTCCATAAGCGCATTACACTTACCAAAAGCAGGAACTCGGATCTGGCCCACAGCTCATATTCACGTTTTGTCCATCACACTTCATTGGTCTTATTTCATCTGAAGCAATTCCTCAGTCTTTGCCGTTCCTAACCTTGACATTTTGAAGAGTAAATTAGCCATCTTGCAGAGTATCCCTCAACTTGGGTTTACCTGGCATCTCCTTATGATTAGATTCAGGATATACATTTTCGGCAGGGAATTTACAGACGTGTTGCTCTGCTCCATACGCATCACAGTCAGCATGTGATGTTGGTTTGTCTTTAAGTTTATAATCTCTCCACTTTGGAGTTACTTCTTTTCTTTTTGTAGTTAGTTTTTGGAGAAATACTTTAAGCCTCTAAATATCCTGTTCCCCATCTAATTATCACCCATGAGTTTTAGCCTGGATTGATCATTTTTGCTGAATGAAGTACCATGAAGGCTACAAAATGACAAGTGATATTCTCACTCCCATAGTTTCTTACACATTTACTGTTGGCATTCTGTTGTTAAGGAGAAGCTTTCTTTTCTCTTACATTAAAAATTTTTTTTGTTCATTTAGTATGGACTCATGGATTATCCTGTGAACAGTTACCAATTATTTTGATGCTCAGATTGTACCACATTTGGCCAATCTGAGTTCCTTCAAGCTAGCTCTTGTATCCCTGTCTTTTTAAGGATACTTCACAAGATATTCTAGCCGCCTTGTACTTTCCTGCTCTGGTCCTGGATCTGGAATCAGCCTTTTATCCAAGGAGCCTGGATAGATGACATGAATGATTGGCCCAGACTAAGAAGTGAAATGCCATTCTGACAATCAAAACAGATGGCATCTTTGGCTGCAGTCAGGCAAAAACTGGTTTCTAAGCAGGGGTGACAGGTCACTCAGACTGTACTAGAAGGCCAGGCTAGGCTTGACTTCCATTTAAAAGGATGATCACAGTGAATGGGCCCAATGCAGTGGCCATAACTGCACCCTGTGAAGTTCTAGACAGGAAGGGAGAAGGAACTAGTGGAATGAGGGTGTTCCTACTGGGAGACTACCCAAGGTTGGAATAAGCCCAGCAGGCCCCAGGTGAGTCCACCATGAAGACTGATCAGAGAAGAAACTGTGCTATTGGAAGGAGAGGGAAGAAGGTGGGCCCAGTGATGTTACTGGACCGGTGTCAGCTCATGTGCTGTTCCAAGACCCAACTCTGGCTCTTGTCTGGTCTGGCCACAGCATGCCCACTATTCACTATAGCCAGGACCTCCTCTGACTACAGGGAGCAGTGGCCTCAACAGGACTGGGAGGCCTCGGTGATGAAGCTGTATTGGTTTTTTTTAAAGTATGGTTGATCTACAATGTTTTAGGTGTACAGCAAAGTGATTCAGTTATACATATATATCTATATCTGCTGCTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTTTGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTTCCCCATCCCTGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTTCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCCTAGTGACCCCATGGACTTCAGCCTACCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCAATATCTATAGTTACCTTTTTCAGATTCTTCTGTTAGTTATTACAAGATATGAATACTGTTTCCTGTGCTATTCAGTAGGTTCCTGTTGTTTATTTTATATGTCATAGTGTGTATCTGTTATTCCGAAATTCCTAATTTATCCCCTCCCCCCATATTGGTCTTTGTTGTGCTTATACACTCCCATCGGCAGGCATCAACATTGAGCCTGACTGGCCAGCAGGGAAGTCTAGGGAGGCCGCAGGGTAAGCTGCTTGGGTGGAGAACAGCCAAGACCTGTGAGGTCCACACAAGGGTTAAACCTTCAACTGTGGCAAGGCACCCTCGGGAGGAGACTTAGCTGCTGCAGACAAGCAAGCAACCCCAGGGAAGCACAGCTGCCTTAGAGAACCCTATCTTCTGATCCATGATTTCTGTACATAAGAGCTGGGACATACCTCCTGAGGTGCAAGACAGGACTCCCAAACTCTGTGTCTTCCTTAAGCTTTCCAAGACCCGCCCGGGCCACTGAAGTGGATCTTCCAGATGCTTCCCCAGCCACGGAAAAGCCAAGATAGGATGGGTGGCCGGTGTTCCACTTATGCCTCCAGATGACTTGGCAGAACATGGGCACTGTATGTGTGTGTGTCCTGGCTGTTCCTGTTATGGAAGCCCTAGGTTAACAGCCTTACTCACACCTCTTCTGCATACAGCCTCTTAACGTTTGGTAGGGAACCTGCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGCGACCCCATAGATGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCCGAGTCGTGTCCGACCCTCAGCGACCCCATGGACTGTAGCCTTCCAGGCTCCTCCGTCCATGGGATTTTCTCCGGGTAGGGAAACTACTGAGCCTTAACAGGCATCACCATTCAGAACACAGTTCCCTCTGGGGAGAGCAATCAAGATGGTGAAGTAGTACGATGTGAAGCTCACCTCCTCCCACTAATACATCAAAAATATACCCACATGTGGGATAGTTCTCACCAAACATCTATTGAGCCCTGGCAGAAGACCTCAGACCCCTGAAAGAGCAAGAAAATCTCCACGTAACAGTAGGATGAAAGAAAAGGGGGGAGGGGAAGGAATCCAGATTGTACCTGTGCTCTTGGAAGGAAGCTGTGAAAGAGGAAAGGTTCCCCCACCCTGAAGTCCCTTCACCAGCAGAGATCAGCCAGAATATAAAGGAGCTTCAGAGCCTCTGAGGAGAGCACAGCCATCAGTCTGCAGCTGCTAGAACAGATAAAGACCCGTATAGACGGTCAGTGCTATGGGTGTGCACTCCCCAGCCTGATAGGTGTCCACTGGAGTTCATGTCCACAGTCCGGGCGGGGGCTGGGTGCAGAAGCTTAGGCTTCGGAGATTAGACTCCATGAGAGGACCAAGGTGAACTTCGTGCAAACAGCCTGAAGGGGTTGGGGTCTGGTAGCACCGCACCTGAGGGTGTACTCAGAGGATGCCTGGGCCACCTTAGAGGGCAGGCACCATTGTGTGGGCAGTGAGTGAGGGGAGGAGCGAAACCCACTGTTACAGCCTTTATCACTGCATCAGCTCTCAGGCAGCAAGACACCATCCAAAAGAACAAGATCTGTCACCAACTTTGAAAGCTGCTGCCCCTTGGATGCAGGAGTCATCTCTAGTGGCTGACTCGGCCCTTTGGGTTCCAGGAGACATTTCTCCAAAGAAGAGATACAGATGGCCAATAGACATGTGAAAAGATGCTCAACATTGCTAATTACTAGGGAAATGCAGATTAAAGCTATGAGGTACCACCTCACACTGGTCAGTATTCCATTCCTCATAAAACTAAAAACAATTACCGTATGACCCAGCAATCCCATTCCTGGGCATATATCCAGACAAAACGAATCCAAAAAGATATGTGCACCCCTTTGTTCATAGCAGCACTATTCACGATAGCCAAGACATGGAAGCAACCTAAATGTCCAGTGACAGATGAATGGATCAAGATGTGCATATATACAATGGAATACTATTCAGCCATAAAAGAACAAAATGAGGCCATTTGCAGCCACATGAACGGACCTTGATTGAGATTATCAAGTGAAGTCAGAGAAAGACAAATACCCTAAGATATCACTTATATGTGGAATTTAAAATATGAAAAACGAAGGCTATAGGTCCCTCAGTCGTACCCAACTCTTTTCAACCCCATGGGCTGTAGCCCACCAGGTTCCGGTGTCCATGAATTCTCCATACAAGAGTAATGGAGTGGTTAGACATTCCCTTCTCCAGGGCATCTTCCTGACCCGGGGATCGAACCTGGGTCTCCTGAATTACAGGCAGATTCTTTATTGTCTGAGCCACAAGGGAAACACCTTATGACAAAACGAACCTATCTACAAAACAGAAACAGACTCATGGACATA EMBV3_19846 GCTATAAATACGTTAGCATTGGAGCCAACTGAAAGGCTGCGGGTAATTTGGGATGCGCAG Gene GeneID:616712|C22H3ORF18:NM_001101260:310_cdna Constitutive 1 NULL GeneID:616712 22 GENE C22H3ORF18 NULL chromosome 3 open reading frame 18 ortholog EMBV3_43087 TTGACAGGGATATGAATAAATTGGAAGAAAGATGTGGTTGGCTTTCAGCTCCACAGGCCC Gene GeneID:615745|GBE1:NM_001122729:22_cdna Constitutive 0 NULL GeneID:615745 1 GENE GBE1 NULL glucan (1,4-alpha-), branching enzyme 1 EMBV3_10359 GCTAATGAGGAAGGTCTGGCATCATTGCAGATGTTTCAAATAGATAATGGGGTACTCTCT Variant GeneID:616874|CENPQ:NM_001078065:359_cdna 591^710 1 EMBV3_08674 GeneID:616874 23 GENE CENPQ NULL centromere protein Q EMBV3_28861 GCATCATCCAGCACGAGATGGACCACTTGCAGGGCTGCCTGTTCATTGACAAAATGGACA Gene GeneID:788473|LOC788473:XM_002694907:984_cdna Constitutive 0 NULL GeneID:788473 18 GENE LOC788473 NULL similar to Peptide deformylase (mitochondrial) EMBV3_24640 CCTGATGCAGGGAATGCAGGAGGGGGTGTGTCTCCCCTCAGCAAATGCAATAATACCCTC Gene GeneID:519617|GIPC1:XM_002688737:63_cdna Constitutive 0 NULL GeneID:519617 7 GENE GIPC1 NULL GIPC PDZ domain containing family, member 1 EMBV3_17756 ATGCTGTGATGTGTGCCCAGAGAGGAACTGATCACCTATGCAACCTGGGTCTCACCGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16384 AAGGCTAGTAGACACTGTACTGGGGCTTTTGTTTGCCCAGGTTTGCTGTGTGAGAGGGAT Gene GeneID:100337219|LOC100337219:XM_002690644:147_cdna Constitutive 0 NULL GeneID:100337219 10 GENE LOC100337219 NULL hypothetical protein LOC100337219 EMBV3_08836 ATTCTGGAATCCCCTTCTCTGGAGCAGAATGTAGATCTGGTGCCTGCGGACTTGGTCCTG Gene GeneID:789955|LOC789955:XM_002683663:1_cdna Constitutive 0 NULL GeneID:789955 7 GENE LOC789955 NULL hypothetical LOC789955 EMBV3_14945 TGGCAACGGTAGATGACTTGCAGTTTGAAGGCCCCTTTTGGATATGTGCCACATTGGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32270 TGGATTGGGACTGTCATGAGCTTCTGTGAAGCAGTCCTCTGCTACTTCAACCATGGAAAG Variant GeneID:517977|ODF4:NM_001075762:45_cdna 780^936 1 EMBV3_04659 GeneID:517977 19 GENE ODF4 MGC151922 outer dense fiber of sperm tails 4 EMBV3_42999 GAAACAGTGTCAGACTTTAATTTGGGGACTCCAAAATCACTGCAGATGGTGATTGCAGCC Gene GeneID:520684|ZNF33B:NM_001075810:11_cdna Constitutive 1 NULL GeneID:520684 28 GENE ZNF33B NULL zinc finger protein 33B EMBV3_12085 CCCAACGATTTCAAGAAAATCTTAGGTAACATATGGTGTATTTCTGTTCAGTCTTTTTGC Gene BVV0102_449815 - 1 EMBV3_37231 GK000004.2:12767678-12944829 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19078 GCGAAGAGAGGGTTGGCTTAGTTATTTGATAAAGCCCCTTCCAGGCCTGAATTCCTCGAC Gene BVV0102_087548 + 0 NULL GK000017.2:53770283-53968915 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077271 TCONS_00077273 TCONS_00077270 TCONS_00077272 1 XLOC_047036 Coding TCONS_00077270 XLOC_047036 Coding Coding LOC100847522 17:53967200-54003087 j TSS57811 4073 1 TCONS_00077270_2 285 0.130370734102627 4 0.886613163907931 5.67696497852448e-07 3.47906377030154e-11 6.36164111757387e-05 1.74018568733754e-05 0.000213071011846066 0.00184504922949745 0.000293374939414405 0.000188444275047563 3.32441973575074e-09 9.16335924695643e-29 0.000134377339745534 1.26475244416027e-26 2.54298782849652e-17 7.52142237348304e-06 6.10452830752307e-27 0.00151322645984032 8.48367124811301e-05 0.000381271981619768 6.38313142985737e-05 0.000625668128651766 0.00427600388385257 0.000104830706446987 0.000123570253345626 9.53712805934064e-16 1.56148105942363e-06 0.00150903236707305 6.53452550988894e-05 6.99805460086687e-05 4.22614101675985e-05 1.21308140079494e-05 XM_005217966.1 ZNF664 PREDICTED: Bos taurus zinc finger protein 664 (ZNF664), mRNA. 0.0 7070 100.00 0.962190031917506 XM_005253551.1 ZNF664 PREDICTED: Homo sapiens zinc finger protein 664 (ZNF664), 0.0 4028 81.96 0.998281365087159 TCONS_00077270_2 sp|Q8N3J9|ZN664_HUMAN ZN664_HUMAN Zinc finger protein 664; 0.0 536 100.00 0.912280701754386 5 coding 0 0 0 0 0.0157631458860915 0.904266430697833 0.0143136892789727 0.85973373016824 CTTCAACCCCTCACTTGGAAGCGCCTCGCGTCCCAGCAGAGCCAGCGGAGCATCCTACTCAGGTGATGAGGAACCCTCCGGGCACCCAGCGCAGATCGCTGCTGCCGCTGGACGCCTCCATTGTTTGACCATAACAAGGGCCGGATTCTCACCCAGACCTGCAAATCCAAGAGACCCATCTCTGGAAGAGAGAGCTCCTTCCTCAAGATCACAGAAGGAGACTGCCAGAGCAACAGCCGTGCAGGGAGGCTCACACGGAGGACTGACACGCCTGGGCCCGCGGTGCTGGCTTCTGGGGAGGCTCCCGTCTGATGCGAAGGAGGCAGGATGCCATAGTGACTCTGCACGGGGAGGCTCCCGGGGACCGAGGCCAGCACGCAGGATTGCGCCCTCGGCCGCAGGGGACACTGGGCAGGCCTTTCCCTGCAAGTGAGACGAACGAGATTATTCTGCAAGAGGAAGATTCCAGGGGCTTAAAAGCACAAAGGTTTGCACCTTGGCAGCCTCTTGGAATGTTGACAGCTCAGGATCTTAAAGAAAGTGCTGTGTTATTGAGTTCCAGAGTTGATGTGGATATACATGTCACTTTATAATCAATAATACTGAGTGAGGAACACTATGCAGGAAGAAACCTTCCATAGAAAGACAGGCAGGGAAAAGCTTAGGCCGACCTCAGACCTCCCACATAGAGCCAGCTTGAGATAAACGCCAACATGGCCAAATGAGAGACTCTGAGACAGCCGCCTGTAGTCATTGTAAGGAAATCTCTGAATCACGATACCAAATAGGAACCATGATCTACAAGTGCCCCATGTGCAGGGAGTTTTTCTCTGAGAGAGCAGATCTTTTTATGCATCAGAAGATTCACACTGCTGAGAAGCCCCATAAATGTGACAAGTGTGACAAGGGTTTCTTTCATATATCAGAACTTCACATTCATTGGCGAGACCACACAGGAGAGAAGGTCTATAAATGTGACGATTGCGGTAAGGATTTTAGTACTACGACCAAACTTAACAGACATAAGAAAATCCACACAGTGGAGAAGCCCTATAAGTGTTACGAGTGTGGCAAAGCCTTCAATTGGAGCTCACACCTGCAGATTCACATGAGAGTTCATACAGGTGAGAAACCCTATGTCTGTAGTGAGTGTGGAAGGGGCTTTAGCAATAGTTCAAACCTCTGCATGCATCAGAGAGTGCACACCGGAGAGAAGCCCTTTAAATGTGAAGAGTGTGGGAAGGCCTTCAGGCACACTTCCAGCCTCTGCATGCATCAGAGAGTCCACACAGGAGAGAAGCCCTATAAATGCTATGAGTGTGGGAAGGCCTTCAGCCAGAGCTCCAGCCTCTGCATCCATCAGAGAGTGCACACCGGGGAGAAGCCCTATAGGTGCTGTGGGTGTGGGAAGGCCTTCAGTCAGAGCTCCAGCCTCTGCATCCATCAGAGAGTACACACAGGGGAAAAACCTTTTAAGTGTGATGAGTGTGGGAAGGCCTTCAGTCAGAGCACCAGCCTCTGCATCCACCAGAGAGTACACACAAAGGAGAGAAACCATCTCAAAATATCAGTTATATAAAGTGTTTTGCTAAGAGTTTAAAAAAAAAATTCTTAAAACCCATAAGTGCCACTAGGAAGGAAAAACCCTGTAAATACCTACATTGATCCAAGAAATTTTTACAGCAGGACCCAGCAGAACATTGTTTTCCAGGAGGCATGTGTGAGGGTGAGTTTTTGGATTCATGCCAAGTGTGTTGCACAACTTGTGAATCTGGAGCTCCTGTGAGTGTGTGCCCAGGGCAGGCTGTGAGGTCCCAGTCGTGGGTGTGCATTTCCTGGGATTCTGGTGGAATAACTACACAGGAAACCATGGTCGTTGTGCAGCCTCCTAAGTCACCTTCTGTCTACACTTTACCTAAAAGTTACCCCAGATACTGCCCCATTTCAGGAACTCACGATCTTCCTCCTCTTGATCCCAGCATACCAGTAAATGCATCTGAAAACGGCCAGCTCCCACCAAGTAGTGTTCTGGTACTTCAGAGGTTACCACTTGGCTTAGCCTCTCCATATCTGTCCATGTATCCCATTACTTCTGCACTCACTTTACCCGTGTATCCTCCAAATGCCCATAAATATCCACCCCTTCCTAGATGGCATCAAGTTTCATTTTAGGTTTTAGGTGACTCATGATGGCCACTTTGCCTATCAGAGAAAATCATTGGCAAGCATACACGCCCTTGAACTTTAATTTTGTGAATTCTGCTAATCACTGTGTCACTATGTTAGACTTAATTTTCTAGTGGCTACATCACATATTTTTAACTTGAATATTTTTTGTTTTTTTGTGGGGGGGGGGGAATAGCTGAATGTAAATAGGGAGGAGAAAGTGAGCGGAGTTAGGACTTTTCTCCATCCAGAACTGCCCTCTGGGGCTCCTTTAGTAACACGTGGAGCCACTTTCCCGTAGGAGAAGTGGATGGTAGGAGGCGTCCCTAATAATAGTTTCTGTTTCTGTAATTTTTGGCAATAATGTGTAAGATTACATATCCATTCCTTTGTAGGCAGGAATGTCTCTGTAAACTTCTCCTTTTCTTTCTTCATTCATTGGACAAGTATTTATTGAACACCTCCTATGTGCCAGGCACTGTGCCCCTTGCGGGGGATACCACTGAGTAAGACAGACAAGGGCCCTACTCTCGTGGAGTTGACTTCTGGTGGAGGAGACAGATGATAAGCAAGTAAACAAATAACGTAGTGTGAGATAGTGATTAAGTGCTATGGAGAAAATAACCTAGGGTGATGATTTAGAGCCGTGGGGGGTGGGTGAGGGTGGGGGGCGGCAGTAGATAGCGGTCAGGGAGGCCTTTGTGCCAGCGAGGGTGGCCCGGGGTGGCTGCGGAGCGCAGGTGCCCAGCTTTCGCAGGTGGGTCGGCCTTGCGGTGCGCAGTGGGCGGAGCAGAAGGCGTGGCCCGGTGAGTGTAGTGAGCAGCAGGGCGGGGGAGATGCTGAACGCTCAGTATCCTGACGTTTATAGGCCTTTTTTTTTTTTTTTTTTGGCTACATTGATAATAAAAACTCATGTGGAGGAACTCCAGGAATGTTTAGAAGACCAAAAGTCCCCAATGACAACAAAAAGCAACTAAGTTTGAACTTTGTTTCTCTCCTCATTCCTGTTTTCGTTGATTTCCCACATGTAGTCCTTTTTGCTCAGGAAGTCTTTGGGGGAAATTAAGGCTTTTTGAAAGCTCTGAACTGGGTGATCAGGTTAGCAGTGTCTGTCCACTGTCTTGAGAGGTTGGAAAATGAACTACCCGAAATAGTCACCGAAATACAAAACAAAGCTTGATTTTCTCTTCATATTTGAATTAAGTTCTTCTGTTTGACTGGAAGGGGTTTTTGTATAACTAAAACCTCAGTGCATAAAGGAGATTTAAAAGGGGCATATAACTGAGTGGGTGAAAGTAGAAGATGGGATTGGGGGGGGTACATGTGTTACCATCTGAATTTTCATCTGGATAGCTCTGTTAACAAGCCTTTGGGAAGTCACTTCACATAATTTTCCTCCTTTTTGCGAAGAGAGGGTTGGCTTAGTTATTTGATAAAGCCCCTTCCAGGCCTGAATTCCTCGACTACGATTTACTGTAGTGTCTTAACACTCTACCATGTCACAGTAGTGTGGAGCATTAGAGAAAAGCCTAGACTTTTAGTTGATAGCAAGCCAGTTGAAATATCATTAATAGAATTTTAGTTTTAGGAAAAATTGGTTTGATTTCTAGCTTTATTACTATTAGGTATGTGAGCTTGGGCAAAATCGCTTAATCTTTGAGTCTAGTTTTCTCACGTACAAAATGAGGACATTAGGCTAAATGATTTCCAAGTTTCCAGCTAGTCCTAGAGTTCTATATTTCTACATAGTTGAATTATTTTATCATGCTGTTGCTGGGGAATATGACTAACACTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGTCCATAATTGTTATCTTTGGAAAATATTATTTGACCTACAGTATGTCCAAATCAATTTAATAAAATCACTTTATAACAG EMBV3_22638 TCATTAAGGAGTATTACCTTGACATCACTGGGTACAGGGCACGTCGATCCACTCCAGTCC Gene GeneID:786698|LOC786698:XM_002683860:3_cdna Constitutive 0 NULL GeneID:786698 X GENE LOC786698 TSPY-M2 similar to Testis-specific Y-encoded protein 1 (bTSPY) EMBV3_20858 GGGTAGCCCAATAACCTTTAATCTGACCTTGTATTGTCTCCTTTAAGTACTGAGTTGCAC Gene BVT0102_018745 - 1 EMBV3_34591 GK000020.2:37393798-37458000 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113882 1 XLOC_069128 NonCoding TCONS_00113882 XLOC_069128 NonCoding NonCoding - 20:37394254-37403400 - TSS85058 9146 1 TCONS_00113882_14 95 0.153181718784168 1 0 2.52892938993224e-05 7.69069155075455e-06 3.03542704471803e-06 1.81591575144119e-06 0 3.91105709234586e-07 2.55049930724502e-06 2.58679506881052e-06 3.70955735963398e-05 0.000166600566333637 4.90574607974624e-05 7.10510957289701e-05 1.35602580008513e-05 0.000120351110335638 7.3358550659728e-05 0.00104328857712425 0.000931224072298487 0.000842214658039304 9.68958332606079e-07 1.33669805781731e-05 1.23099261696495e-06 0.000530862461267608 0.000211298216866247 0.000524237156324375 7.19663646876391e-05 2.31099051072559e-06 2.56249006753529e-06 0.000109221316067994 0.000143285315038619 0.000201372545121417 NM_001101133.1 FAM26D Bos taurus family with sequence similarity 26, member D (FAM26D), 7e-90 338 83.43 0.0359720096216925 NR_046262.1 LOC646719 Homo sapiens uncharacterized LOC646719 (LOC646719), non-coding RNA. 0.0 1031 68.31 0.291930898753553 0 noncoding 0 0 0 0 -0.0924710286033134 0.436417172717213 0.0552576972544287 0.343322438581841 GGCCACGTAGAGGACGCCCGCGATCCGACGGCGACCGAGCATTTTTTAAATGGTGTCCCTGCAGCCGGGTGGATGGATGTATCGTATTGTACACTCTTCTCTCTTTTTGAGAGGCCGGACTTTACGCCCGTCTCTGCATTATTTCTGCGGAGTAAGGACGCAGCCCTTGGAGGAGGCGAAGATTCTCAGCTGGATTGAATTGGAATCGTGTTTGTAATGCATTTATTTCTGGAAATATGCGGTCTTTTCTGGGCTAGCTTTTTGTTGGCGGTGGTTTTGGCTCTTGCCTCGCAGTCGGGATAAAGGCCTGTAGGCGACGCTGTTCGAGCGAGGAGCCGGCCCGCGGTGGGCCCGGAGCGCGCCCCATTCTAGGTGTGGGTGGAGCCGAGCGCGCGGGGAGAGCCGGCGGACTGCGGGCCTGGGGCCCGCCGATTTCAGACATCGTTTTCCTCTTTACGCTCGAAACAGAGGTCCTGACCAAGGCTGGAGTACAGATGCGATTTTGTGTACAGTACCGAGCCTTCTGTAGTCTCTTACTGAAACACCTGAAATAACTTTGTCATACAGTTCACTATTAAGTTTACTTCTGTAAATTTAGAGGGTGCTATTCTTCGGGTAAAAGTGCCTAGGTAAGCGGATTTTATTCAAATGGGACGAAATTTGTGTTATATTATCATGAGTTTACTTAAGTTGTATGTGAACTGTATTTGTCTGTGTACCAGTAGTACGCTGAAAGTTAAACAGGCAAATTTGCCCGCGGGCCATTCCTTTTGCCTCAGAGATCGCTACAAGGACTAAATCAGATCTTACACGTCTCTCGAGCCGGCATTTGCTTAGCCGGGAGTAAGAGCCGAAGCCTTGACCACGGCCTGAAGGCGGTGCGCGCGGTGGGGCGCGGGGAGCCGCCTCGGTCGCGGAGCCAGCAGGGTGTCTGCTCCGCCTTCTGCCTGGCTCCTTCCCCGAGTGCCACAGAGTTTCTCTCTTACTTTCAGGGTTTTGCTCGGCTGTCTCCTCGGGGCTCTGTGGCTTCTCTTTAAACTGGACGTTCCCGATTCCCTCGTCATTTTTGTCCCGCAGGCATTCTACTTATCATGCTTGTTTATCTCATCTGTTTGTACCGATAGAATAATTAATGTAAGCCCCGGGAGGGCGAGGTTCTCCTCCCCGGCCCGCCCCAAACTGGTGTTTTGTGTAGAAAAGACTGCCTGACACAGTATTTGCTTAATAGCTGGTTAATGAATGAACGATGATTATAAGGGCCTTGACCTCACCCCACACATACACCCGTTTCTGAACTCTATTTCTTACGTGTATATATACTTATATGCTACAGAGAACTTTTATGAAAGGTGTGTGAAAACAAAAGAAAACCTGGGGGCAAAGAGCAAGTTTATTACAAAGTTCTAGAAAACGGCACTACTTCTAGACATTGAAAGCCCCCTACAAGCACCCGAAGCCCACAAACTAGTGATAGTTACATGTTTTTAGATAAATGGGCTTGCTCGGGGACACTACATTATGTGATCCATCGGATTATGTGAGTATATTCATATTGCTTTCCTCTCTTCCTGAATCAAACTGCATTCTTCATCCATTCTGTACCCTTTCTTGAAAAATCATGCTATTTTCACTAAGTTAAAGTATGTGAAAATTTGGTTGGCTTAGTCCAAATCCAGCACTGCTGTAGAAATTCATTCAGCAAGTACATATCGGGCACAAAATATATGCCGCCCGGCACAATGATTCAAAAGATGCTGTGTTTCTGAGGCTTAAAGGACCACATATGGCTACTTTGGTTACTACTCAATTATGCTGTCAAGCAAAGCAAACGCTAGTTAGATTTATTTTTACAGTTTCATTTTGAAGAAAAGGTTCAGTGAAAGCTGAGGTCAGGCTTAGTTTGGATATTTTAATTCACCTTTTAGTTTGCTGTTCATTTACTTACTTTATTATGATAAGCTCCAGGTATACCAATAAGTTAACTGATAAATTAATTTTTGAAAACTGAAACATTTAGGATTTTTACTTCCTAGTGGTTGGATGAACAAGACTTTTAAAATATATGCTATAAGCCTTTGGGAATCATTTCATGTATGGAAATTTTGGACAAGAAAAGACAATCTTGATAAGTATTTCATAACCATTAATACAATTAATTAGACATTGTCTAGTAAATCAGTTTGTTCATTATTAAGCACAGCTTTGAGTAATATACAGATGGTTCAGAATGTGTTTTTCATTCCTTTTTAGAATACTAATGTTTCAGTTTTCTTAGAGAAGCAAAATTATCTTCTTATATACTTCCTTAAATGTTACTGTTAAGGTGAAAATTTTGCATGTTCAGGTAACAGAAGTCTTGGCATTGTTGTACCATTTAATTTAAAGTTTTAAGTATTTTTAGTTTCTTCGCTCACTACTTAATAGGAACTTACTAGGTGCTATAATTAGCTTTTACAGTAGGCACCTCCTAAACATTAGTGAATTAAAAACAGGGTCTCTGCCTTTAAGTGGTTTAACTTGTAAATAGTTTATAACAATTTTTTTCCAAGTCTTGGAACTAATGAAATTGTTTCAATGCATAACCATTAAATCAATTAGTGTTTTGTTTTCCTAAGTTTAAATATCCAAGTTGAGATCTTAGGTAGACTCTACTAATATAATCTTAGTGTTTAAAACTTTTATGTCCAAAATCAGTTGATTTATGGTGGTGTTATGTTTCACTGCTAGATCCTTGGTTTATCAATTCTTAGTTTTATAGGGTAGCCCAATAACCTTTAATCTGACCTTGTATTGTCTCCTTTAAGTACTGAGTTGCACTACTCACTTTTTTGCCAAAGATATTCCCGTATATTCCTATATGTATTCTTGATCAGTAAGCTCCAAAAGATTTAATAAAATATTTTAAAATGTATTATAAGTATTAACTATTGAATGTCATTAACAGGAATTGGTATAGTTGGCAAATTATGAGTTATTTTATTTAAAATATCTTTAAGATACAATTTTCCATAAAATGATAGGAGTAAAACATTTTAGAAAATAATTTTCTTCTCATTATGCCTACCATTTATCAGTGATAAAATTAACTTACAGAGACAAATTTTGAAAAAACAGACGTAGTGTATATATGTTTTGTACATTATTTCAGACCACCCAAATTATTTCATATATAGGATAATTAAAGTTACTTTAGGATGATTTTTATCTTAAATTTTGATAAAGAGGTAGTTATAGATGTTGATTTGAGTGTGAGCTACAAAATTATCAGTCTGTAAATGTTTCTATTTCAAGTTTTCAAAGTAAATACCTTAATCAAATCGGTGATAGTGTTTATGACAGTTATTCAGCATATCTTATCCATTTTTGTTAAGATGGTAGAAATGAATGGTTTTTCACTTGAATGACTTTCTTTATGTTGGCCTTTGAGAGAACAGGCTTTGTCTTTTCATTAATCTTTCTCACCTCCAATTAAGGATTTTCTCTAAATTCATAGATTTTATTATTCATTGTTCAGTCGCTGAATTGTGTCCAGCTTATTATTCATACCATCCATTTATAATCCTGTGACATTCCTATATTGTTCTTTATATTTTTGTGTAGCTATGCCTTGTTTTCCTGGATCAAAGTGACTGGTTATGTGTTAAACTACACTGTAAGTTTCACTGTGCATTACATTACTGTGGGGCCCTCAAAAAATGTACTTCTGAAATATAAATTCAATATAAAATTATTTCAAGTCATTAAATCTTCACGAAAGCCTAAACTTACGGAACCTACACATGTGCTGAATGTGAACCAGAGAATTAAACTCTACATGCATTTTAATACTAATGTGGAACAACTGTTTAAAATTGATTTTATCAATGAAGGAAAACATACAAACTCCATTGAAAACTTAACATCTAAAATAGGTATAAAGGGAGTGCTTATGATGCACATTGGGTCATGTACCATTATGGGTCATGAAATAAACTCAATGGGTTAAGAATAGTGTTTTTTATTTGAAATAGATGAAGCAATCAAAAATCTTAAGAGTACATCACATAATAAAATCTGTATAAACATTAATTCTGTTTATGTGTGTGCTAGGTTGCTATTTTTTATTAGGGATATTGGCCAGAAAAAGTAGTGTTTTATCTACAGTTCAGATTTTCCTTTACTTCCTTAGAAAATGAAAAAAATGCTAGAAATTTATGACTGCCTGTGAAATAGGAATTTTAGAGGAGGCACTAGTATATTTCAGAGAAGATTTTATATTACTTAGTCATAGAAATTCAAAGCAAACTGCTACCTTCACAAAGTAATTATCATATGAACAAGTTACTCCCTGAAGATAATAGATACCCCTCTGAAAGATAACAAACTTTCAATAAGGGTTTTCTCTCTAGCCAAAGTAAGGAATAATTTCTTAACTTTACGTAAATAGTTAACTTTCACTTGCCATCCAACTCATCTATATATTTAAGTAAGTGTACTTAAAATTGTGTACAGAATTCAAAAGGAGAGAATTGTCTAAAGAATTGCAAGGGAGGCCAGTATGCTGTGATCAGTGGGATGAAGACTACCTACCAAACAGAAAACAAGAATTAAAATTTAGACATTTAAAAAATATAAGCATTTCATTACTTAACCATTTCACCTTATTTCAGTCTAGATTTCAGTATTGTGATGTTGGTGAGTGTTAATAAAAGGCTTTTTTCATACATAGGATACCAGTACCCTTTCAGTTAGTTATTTAAGACCTAGTTTGATTAAAATCTTAGCTAAACACAAAATTCTAGAGGACTGACATGAGAATCTCTAATTCAATTACTCAACCAAAGTTATTCACCCCAAGTATTACATTTCACCAATAAGATATAAACCCTATTGAACTAAGAAAGGAATTATATTACTAACCAGCAGAGGGAGCCAAGTCAGTCCTGAAAGATAGGAGTACAAAGAAAGACCACATGACTTCCTGTTTTGAGTTTGTTGTGGCAGCTGTTCAGTTTAGCCTACCAAAAAGCCAAGTAAAAAGATAGGAAGGTTACCAATGTATCAGATGTGGATAGGGTAACAGTGTAACTGTCAGAATTACCTTGCAGGAAGCAAATTGAAAGAAAACATTTATGCTTAAGTTGAGGACAGCCCTGCAAAGAATGGGCAGCATAAAAGAGAATTCCTTAAAAAAAAAAAAAACACATTAAAAATTAAATGAGTAAAATATGCAAACTAATATTGGCTTTCTTTCTACTATAGGTGGTGAAACTCAGATGGATCAGAACAAAGTAATGATAAGCTTATTAGCCATTGAACAGAACCAATTCAAGTAGAAATATTAATATAAAAGTGGAAAATGTCTCAGTAGTATAACCTAAAAAATAGTACCTTAGGACATGATGAATTACTAGATGTAACAATAAGCCATTTCTTAATCCATTTTTATTGAAAGCTGAAAATAGTCTCTAATAGGCACATTTTAAATAAAGTTGGTACATAGATTGATCTTACATTAAAGTTATATGTAATTGTTCCCATTACCCTCTATAAACAAAGCAAAAAGTTAATACCTTCTTGGGTTTCCCTGGTGGCTCAGTGGTGAAGAATCTGCCTGCCAATGCAAGAGACAGGTTCAGTCCCTGAGCCGGGAAGATCCCACATACCTCAGCGCAACTAAGCCTGTGTGCGACAAATACTGAGCCTGTGCCCTAGAACTGAGGAGCCTCAACAACAAGTCTGGGTGTCCTAGAGCTCCACAGTAAGAGAAGCTATTGCAAAGAGAAACCCACACACCACAACCAGAGAATAGCCCCTGCTTGCTACAACCTGAGAAAGCCCGTGCTGCAACAAAGACCCAGCACAGCCAAAAATAATTAACTTAAAAATTTTTTATTTTAATTTAAAGTTATACCTTGTTTCATTTCAGCTGTTTGGGGGAATATAGCAGCTAAAGGCAGTTCTACGGTCAGGTTATTTAATACCTTCTAAGAACCTCAAAATCCTTGATAGAATGATTTTTGGAAGCAAATATTAAGAGCTGGGTGTTAGCTAACTATCAAAATTTAAAGGCCCAAACAATTACAGTTTAATAAACTAAAATAATGGTAGTCTAGGTGACTTAGCATAGCATAGCATAGCCACTTACTCATTGAAAGGTATGTGGAAACCTTGTGCAAAGCACAGACAACAGATTCAGGCAAACTTTAGCTATAGATATATTTACTTAGGAGCTTCCCTAGTGGCTCAGTGGTAGTGAATCCTCCTGCAATGCAGGAGAGGTGCGTTTCATTCCCAGGTCAGGAAGATCCTCTGGAGAAGGAAATAGCAACACCCTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGAATCCCAGCAGGCTACAGTCCATGGGGTTGTAAAAGAACTGGACACGACTTAGTGACTAAACAACAATATTTACTTAAGTGTTCATTATAAATACTCCTTGAACATGTACTATCTCCATAGGACATAGAGCATGTCTTCATTATAAACTCGATAAAATTCTTAATATCTTGTTGAAAGATTTAATTTCATTATATGAAGAGTCGTAGAAATTGAATATGCAATCCATTGAATCCAAGGAGATGGCACTTGGAAGCAAATCATTTAGTATTGAGTACTAAAACGTAGATTGTCAACCTCTATAAGTCAGTTCTTTTATAATACTGCATTATACTGACATTCAATATATTGTCATCTGGTGTCAAATCAGTTAATCACAGCAATGATATGTAGTAAGTAAAATTCATCTAATACCAGTCCTAGAGACATTTTAGTGCCGAAAAAGAATTTAACCAGTATTACTACTAATTATGTGCTTTTTTTACATGTAACTTGCTATAAATATGGGCTGTTAGAATTCCATATTATACTTTTTATTTAGTTAGTGTTTTCATCTGTGGGAAATGCTATAATGATCTTTTAAAATGTTCATTAATGAAGTGGCAATAGTTGGCCATGAAACATTTCTTTATTGATAAGCATAATAGTAGGTTAACTCATCAAAACTCAGTAAAAACTATTAACTCTGTCACAAAAGTCAACATTTCACAGTCTAAAATATGGAGTATGTTTTTCTGCCTAGATTTAACAATCTACAACTCTGTGAAAATAAACTCAAAACCAAAGGAAAGAAAATAGCTCATACCTTGTTTTATTCCAGAGTAGGGGATGGTGACAGATTAAGAAAAGCACCAAAAAAAAAATGACTTCTAGTGAACAAAATTAGATCTGAGTAAAGAATTTTTATTTCCCTAAAAAAAATTAAATACAACATTTTAGTCAAGAATTTATACCCAAACATGGATACTGTTTTTAACACTGCTTTTGAGATACTTGAAATACTTTTTTCTTTGAAAAACAGCACCAAAATCCATATTGCTTTAGAAATCATGTTTCTAGTTTATCATCTCGGCCCTGCCCTGTTGAATTCTACATCTCTTCTAAAGCATCTCTCTAGCCTTCTCACTACTGCCTTCTTCCTAATTCTACCATCAACATTCATTAGCTTTCTGCAATATATTCAGCTGATTTCTCATGCTCTTACCCAGACAAACTTTGTAACTTTTGCTTTATGTAAGGAGAAATAGCTTATTATGAACTTAGAAGAGCTATAGAAGTACTTGATAATATATATGCAAAAGTATTTTTAATTTGAAGAACTTACTGTGCATCTTACAGGCTTTGTGTTAAAATTTTTTAATGTCTATTTTGTGCTAGAAGCTTAGAATTGGTAATGATTTAATGTTTAATCCTGTGCTTACGTTAAATTCTTTGGGAAATGCTCACCAGAAAGCTGGCTCGAAATTATCCTGACTACAATGTAACTGTTCAGTATGGTAAGAGTTAAGTGTGACTTCTGAATAAATGTGTCTATAATTCTTAGTAACAGAAGACAGTGTGCTTCTTAAAGAAATTTTGAGTTTGTATATCCGGAGTTGAGATAAATGTGTTTTAACTTACATTTATATTTTTACTACAGGTCCTTCATCCAATAAGCATGTACCAGCACCTGTGTACTGGAAACAGTGAATCCAAATGAATAACCTTGTCTCTTCATACAACTCACAGCCAAGAGAAAGACCAGATCAAATATATTTAACACAGTGAGATAAATACAAAAGTGTTGAAGGTGTTCGTTGCTCAGTCACGTCTGACTCTTTGCAACCCCAGGGACTATAGCCCACCAGGCTCCTCTGTTCATGGGATTTTCCAGGCAAGAATACTGGAGTGGGTAGACATTCCCTTCTCCAGGGGATCTTACCAACCCAAGGATCAAACCCAGGTCTCCTGCAGGCAAATTATTTACCAATTGAGCCACCAGGGAAGCCCAAATGACTATGAGTTGTATCGAAAGTGCTATGAAAGTGCCAGCAATACTGGAGGTTTGGAGAAAAGCTTCACAGAAGAGGTAAAATTTGAATGTTAGTGAAGGGGAAATAATTTTTGGGAGAGGAACATAAAAAGGTATGAAATTGGGAGACTGGGACTGACACACACGTTGTTCAGTCACTTGGTCGTGTCCGACTCTGCGACCCCACGGACTGCAACACGCCAGGCTTCCCTGTCCTTCACATCTCCTGGAGCTTGCTCAAACGTGTGCCCATTGAGTCAGTGATGCCATCCGACCGTCTTGTCCTCTGCCATCCCCTTTTGCCTTCAGTCTTTCCCACCTTAAGGTCTTTCCTAATGAGTTGACTCTGAATCAGGTGGCCAAAGTATTGGAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGATTGATTTCCTTTAGGATTGACTGGTTTGATCTCCTTGCCGTCCAAGGGACTCTCAAGAGTCCTCCAACAGACCTACTATTAATATGGAGTGATATTGGGTGACTTAGTTGGATGGCATCACTGCCTTAATGGACATGAGTTTGAGCAAACTCCAGGACATAGTGAAGGACAGGGAAGCCTGGTATGCTGTAGCCCATGGAATCGCAAAGAGTCAGACACAACTTAGTGACTGAACAACAATTAATATATAGCACAGGGAACTCAATACTCTGCAGTGATCCATATAGGAAAAGAATCTAAAAGAGTTTATATATGTATACCTGATTTACTTTGCTGTACAGCAGAAAATAACACTGTAAATCAACTACTTCAATAAAAA TCONS_00115018 r 5' 104 TCONS_00115018 r 5' 104 EMBV3_40764 ATCGGCGACTTCCTCAAGGACAAGTATGACAGCGCCTCGGAGATGGTGGTGGAGAAGCAT Gene GeneID:540753|WNT3:XM_002696056:367_cdna Constitutive 0 NULL GeneID:540753 19 GENE WNT3 NULL wingless-type MMTV integration site family, member 3 EMBV3_22366 CAAAGTAGTGGTCCATAAAGAGACAGAGATCAGCCCGGAGGATGGAGAAGACTGAGCCCA Gene GeneID:532616|EPB41L3:XM_002697741:236_cdna UTR3_Alt 2 NULL GeneID:532616 24 GENE EPB41L3 NULL erythrocyte membrane protein band 4.1-like 3 EMBV3_05880 GCCTCTTTTCAAGGTGTGATGTTTTGCCTCTCCACTTAAAGACCAGGGGAGAATTTGGGC Gene GeneID:528574|RAB2B:XM_002690733:440_cdna Constitutive 0 NULL GeneID:528574 10 GENE RAB2B NULL RAB2B, member RAS oncogene family EMBV3_13687 GATGAATATCAAACTGGCCTTGGATGTGGAGATCGCTACCTACTGCAAGCTGCTGGAGAG Gene GeneID:100336907|LOC100336907:XM_002687261:121_cdna Constitutive 0 NULL GeneID:100336907 5 GENE LOC100336907 NULL mCG144546-like EMBV3_28373 AGTAAGCAAGATGCTTCTTAATAACCCACCTCCGTCCCACTCTGTGCGCCTGTCCCCCAT Gene GeneID:535344|ZC3H12A:NM_001102187:230_cdna Constitutive 0 NULL GeneID:535344 3 GENE ZC3H12A MGC159813 zinc finger CCCH-type containing 12A EMBV3_26691 CCTAAACAGTCCTAGGTCACTGGTATAAGATCCTTGTTGAGATTGGATGCTGGGGAACTG Gene BVV0102_299554 + 0 NULL GK000006.2:35938395-36087552 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00207908 1 XLOC_126423 NonCoding TCONS_00207908 XLOC_126423 NonCoding NonCoding - 6:35991134-35994404 - TSS155415 3270 4 TCONS_00207908_3 57 0.664525993883792 1 0 0 0 5.65992894652369e-07 0 0 0 0 0 2.41288053714664e-06 0.000153507455441101 6.30052787663174e-06 0.000108254740043763 4.73825378094525e-05 0.000116521064215261 0.000208550876225468 0.000444231498127815 0.000441713287486806 0.000237864730980184 0 0 0 0 0.000140275993675228 0.000153804035163821 0 0 0 6.16846536580229e-05 5.34452255295363e-05 0.000296016409261518 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 8e-59 233 75.15 0.0954128440366973 0 noncoding 0 0 0 0 0.0366688898602452 0.774502475885605 0.0268558943648416 0.719201984530869 ATACTAGATATATATTTTTATGATATAAATGAATATGCTATAAAAAGCAAACAAATAAAAACACAAAATTCCCCTTATGGAATTCAACACTTTAAAGTAATTAAATACATTTTTAAAGTATAAGGCCAAAGACCTAACAGCTCTTTAGTAGAAAAGTGAAAAGTGAAAGTGTTAATCACTCAGTCAGGTCTGACTCTTTGAGACCCTATGAACTATAGCCCGTGAGGTTCCTCTGTCCGTGGAATTCTCCAGGCAAGACTACTAGAGTGGCTTGCCGTTCCCTTCTCCAGGGAATTTTCCCAACCAGGGATCAATCCAGGGTCTCCTGTATTGCAGGAGAATTCTTTACCATCTGAGCCACCAGGGAAGCTCCTCTAAGAAAGGATAATAATTCAGAGCATATTCTTTGAGGCAAATACTTTTAGTTGCCAAGCCTGGCTCTGCTACCATGGATCTGTGTGACCTTAGGCAAGTTACTAACCTATTTGAGCCTCAGTTATTTCATTTAATACATTTAGTATAAAAATAGTTATACCCTTTCTTCAGATATTACTGTAAGGATTCAATGAGATTACAATAGTAAATATCAATCATACCATTTAATTTATAATTACTATTTGTCAGCCATTATTTAAGATATAATAAATATAAACTACTTAGCAGATTGGCATACCTATGATAAAGAAAATTTATTGAAAGAATATGATTTTGTATACAATTAGAATTATACTCTTTCAATAGTGAACATGTTGAATAAAACAAATATTATGTATTGCTATCATTTAAAATACAACTATTCAGTTCAATAATTCCAAGTCTGGCTATCTACCCAAGACAGAGAAAATTAAAACAGGGACTCAAGCAGACATTTGTACACTATTGTTCATAGCAGCATTACGCAGAACAGTTACAAGGTGGAAACCACCTAAATGCCCATCAGCTGATGAATGGATAAACAAAGTCTGATGTATCCCTCTGTTCAATCTTGCTTCCATAGATATTGGAATCTAGCACTCCCTGCTAAACTTCTGATACTCTAATCTTCATCTATTCATTGAGAAAAAGAGAATACCTAAACAGTCCTAGGTCACTGGTATAAGATCCTTGTTGAGATTGGATGCTGGGGAACTGCAGTGTACTGACTGATGAGACGCCTGTTGAAGAAGAACATATAGGGCCAGGTACTAAATGGAGTTTTGGTTCTAGTCCACAATGGTCCACTCAGTTCATGAACCCACCCAGTAATGTCCCCATTTTGCAATATTAAACTTGAAATGGATATATTTGGTAATTGGCACAACATCTATATCGTTTTCCCTGCCTGAGTCCTGTAGTAATGTGAAAAGTCAAGGGCGGCCTCTGAAACTGCTTTCCCAGCCAAGACTGTAAATCAAAACTGGTATCATTTGCAGGAGAGATGGCAGAGATGAGTTCCCCTAAAGAAGGCAAGACTAGTGGTCCCAACCTATTTTCATTTAAATCTTAAGCCTGGCACCTAGAAAATTGAAATGCTTCCTGGATGCCAAGAGTCAAACTCAGTCAAGCAGTAGCCCTCATTGCAGTTGTTATGTAGATGTGCTGTCTTTGCCAGTGCAGATAAACACGGCTGCAGGTCCACGGTATAAAGTCTTTGATCTGGAAAATGTGTTCCTTTTTAACCCCTTTCAGAAAAGAGGGACAGAAACAGTTATCATTCACTTGGAAGTGACGATAGCATACATTTGCAGTCTTGCCCCAGGGTTATGTTAACACTTTCTCCCTCTGTCAAAGAAATCTGAACTGGCTGCTCATCCTGAAGACTCATCCTGAAGAACATCCTGCTGGCACATTATGCTCATAACCTCATGCTAATAGAACCAAATAAACAAGAAATGACAACTATGTTAGAGGCTTTAGGAGACAAATATGCTCCAATGGGCAAGAAGTAAGCAAAGTTTCAGGGGTCTGCTGCATCTCTGAAATTGCTAAAAGTCCGATTGTCTGAGGAATGCTGGACAAACTTCTTCAAGAAAAAAAAATAATGATAACCCTTGCATCTTCCACTCCAAAGAAAGAAACATGATACCTGACAAGCTTCTCTCAGTTCTAGAGGCAGAATATGCCCCAGCTGGGGTATTACTCTGGCCCCTACCCTGGATGATGTGAAAAGCTGCCAATCATGATTAGAGCATAGAACAGCACCGGAGTTCACCCTAGACCCTGGCTGGAATGAAGGGACTGCTACTGCTTAGGACACAGGATCTGTAGACCCTGTGATATTGCAGGTATCTGGAGTGAGAAAAGATGATGTGTGGGGTTTATGACAAGCCACATAGGCTACTTACCATGGCCCTCTTTGGTTCCGAAGCCACCTCAGAGGAGAATAGTTGTTCTTTTGAAAAAGAGTTCCTGGCGTGTTTCTGGTTTCTGATAAAGATGAGCTGGATCTATCAAGCCCACCAATTCCACAAAAGATAGTTGACTGGGATCATGAGAAGACCTGGTTGTGATTATAATGTAGTTATAGGGAGAAATATGTTTATCACCTAGAGGGTCCCTTTGGATAACTCTTGGTTATTAAGATAGTTCTTGGGCTTCCCTGGTGGCTCAGTGGTAGAGAATCCACATGCCAATGCAGGAGACACGGGTTCCATCCCTGATCCGGGAAGATCCTACTGCAGAGCTATTAAGCCCCTGTGTCACAACTATTGAGCCTGTGCCCTAGGGCCCGGGAGCCATGTGCTACAACTACCGAAGCCTGAATGCCCTAGAGCTGTGCTCTGAAACAAGAGAAGCCCCCACGATGAGAAGCCCCTGCCCTCACTCACCACAACTAGAGAATAGTCTTCACAGCAACCAAGACCCAGCACAGCCAAAAATAAATAAATAAATAAAATTATTAAAAGAAAAACTTCTTCAATTCTAGCAGTTCAAGAACCATCATGACCTGTCCATAAGATATTCGAAGATAAGGTAACTTGTCAATAAGTGAACTGCTTAATTCATAGTAAAGCATTCTTTGGATTCTTTAGAATTTACATATAATAAACATTCCACTTTAAAACAATCAATGCTATCATCCTCTTTCATTCTGTTAGTTGGTGACAAAGCACAAACTCAAAATCAGATTTTACTGTGTTTGGACAAAATTATAGTTAATATTTCTATTGTTATTATTAGTTACTGCTTATATTCCAAGCACTAGTTTAAGCATTACATGTGCAATAGCTTTAACCTCAAAATAGAGACGTTAACTCCGGTTAACATGGGTGAATACTGAACCTCAAAGAG TCONS_00204897 TCONS_00204901 TCONS_00204902 . 5' 52741 TCONS_00204897 TCONS_00204901 TCONS_00204902 . 5' 52741 EMBV3_14773 ATTTTTGTATTAAGAAATCAGATGGACTTGGTAGTTTCAATTTAAATCCTTAGATTTTTT Gene GeneID:539625|GBA3:XM_002688172:96_cdna Constitutive 0 NULL GeneID:539625 6 GENE GBA3 NULL glucosidase, beta, acid 3 (cytosolic) EMBV3_17383 GGCCATCAGCAAGAAGTTTGGAGACATGAGACGAAAGTAGGTGGTGCGAACCACGGCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43155 TTTAAAGGGGAGGTCGTGGATGCGGTGGTCACTCAGGTCAACAAGGTTGGACTCTTCACA Gene GeneID:526320|POLR2G:NM_001015633:103_cdna Constitutive 0 NULL GeneID:526320 29 GENE POLR2G NULL polymerase (RNA) II (DNA directed) polypeptide G EMBV3_04849 TTCCCACCCACCTCTACCCAGGTGTTTACCCTGCCTGTGCCCAGGCCAAGGTGGCTCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04920 CCTTGGCAGGCTGCCCGTGCAAGTCCACAGGAAATGGAACCAGAGCACAGTCCAGCCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39498 TGAGAGGCTTGACCAGGATATCAACGCCACCAAGGCTGATGTGGAGAAGGCCAAACAACA Gene GeneID:533171|TRIP10:NM_001081530:66_cdna Constitutive 0 NULL GeneID:533171 7 GENE TRIP10 MGC155264 thyroid hormone receptor interactor 10 EMBV3_26185 AAGGAGGTCCTGGAGTACAATGCCATCGGAGCTCCAAGCCTTCTTCCTGGTGTCAGATGA Variant GeneID:281156|FDPS:NM_177497:22_cdna 169^284 3 EMBV3_14295 GeneID:281156 3 GENE FDPS MGC134236 farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) EMBV3_34715 CGATTGCCAACGGCCTTATAAAGAAAAAGCAGCTTTTCTAGGGGTTTGTATAAATAGTGT Gene GeneID:282471|SLC18A2:NM_174653:15_cdna Constitutive 2 NULL GeneID:282471 26 GENE SLC18A2 NULL solute carrier family 18 (vesicular monoamine), member 2 EMBV3_06422 TGGCAGCTGAGTCACTGCCTTTCTCCTTCGGGGCTGGCAAGCAACGCATGAAGGAGAAAG Variant GeneID:777788|DDIT3:NM_001078163:88_cdna 198^503 2 EMBV3_16851 GeneID:777788 5 GENE DDIT3 MGC152049 DNA-damage-inducible transcript 3 EMBV3_27256 GGGCTGGGCCGTGTAGTCAATGTGGGACATCAACAAACCCAGATAACAGGAAATGATCCA Gene GeneID:504507|TNFSF13B:NM_001114506:42_cdna Constitutive 0 NULL GeneID:504507 12 GENE TNFSF13B NULL tumor necrosis factor (ligand) superfamily, member 13b EMBV3_43023 CAGTTGCTCAGTATTTGTTAAGACTTACAAGTTGTGACTTTCAGTGTGAAAACTGGGTGG Gene GeneID:528099|RAB32:XM_002690302:9_cdna Constitutive 2 NULL GeneID:528099 9 GENE RAB32 NULL RAB32, member RAS oncogene family EMBV3_06360 CATTTACACCGTGGAGTACGCCTGCAGTGCCGTGAAGAACCTTGTCGACAGCAGTGTCTA Gene GeneID:511316|LOC511316:XM_002697219:134_cdna Constitutive 0 NULL GeneID:511316 23 GENE LOC511316 NULL similar to UPF0402 protein EMBV3_29290 CCTCCCCCAGTGCGTTCTGTGATCACCAAGTTCAAAGCTGTGCAATGTGGACACTCAATA Gene GeneID:505994|NCDN:NM_001045931:74_cdna Constitutive 1 NULL GeneID:505994 3 GENE NCDN MGC128555 neurochondrin EMBV3_40154 GTAAATATTCTCTTAGGAAGGCCAGCCCTACATGGGCCCCTTCGTTATATGCCGCATTGC Gene GeneID:511771|CXCL14:NM_001034410:19_cdna UTR3_Alt 1 NULL GeneID:511771 7 GENE CXCL14 MGC127163 chemokine (C-X-C motif) ligand 14 EMBV3_03674 CCAACTTCTGAATGCTATGATGTCCCAGCACGGGAAGCTAATGCTGTGCCAATATACGAG Gene GeneID:534626|GRIA3:XM_002699495:54_cdna UTR3_Alt 2 NULL GeneID:534626 X GENE GRIA3 NULL glutamate receptor, ionotrophic, AMPA 3 EMBV3_02000 TTTTCCCCCTGCAGCTCATAGAGAAATGTGGCGCCCTTTAAATGCAACCTTGGTGATCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35901 ATCGTTGCTAGAGAAACACTACTCGCACCAGATTCGGAAACGCAAGTTGGAGAAGGCGGA Gene GeneID:615356|HES3:XM_002694112:436_cdna Constitutive 0 NULL GeneID:615356 16 GENE HES3 NULL hairy and enhancer of split 3 (Drosophila) EMBV3_33506 ATAGACTCTTAGATCTGTTTGCCAGGCTTCAGTCCAGATGGTCACAGGCTATCTGCCTGC Gene BVV0102_453921 + 0 NULL GK000003.2:59459795-59521466 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31334 GCACCATCCGCGGCGATTTCTGCATCGAGGTCGGCAAGAACGTGATTCACGGCAGCGACT Gene GeneID:515663|NME3:NM_001098986:183_cdna Constitutive 0 NULL GeneID:515663 25 GENE NME3 MGC166188 non-metastatic cells 3, protein expressed in EMBV3_13944 AGAGGTGTCAACTTCGGAGGAGCCAAGAGGGGCCGAGATGCATCCAGAGCGTTTGTGACC Variant GeneID:515356|LOC515356:XM_002695757:219_cdna 50^313 1 EMBV3_30049 GeneID:515356 19 GENE LOC515356 NULL similar to cytochrome b5 domain containing 2 EMBV3_25710 GGCTAACTTTGGTAAAATTCAGGCCAAAAAAGGAAGGCCATTATTTAACCCTGTGGCACC Gene GeneID:782988|MTERFD3:XM_002687664:41_cdna Constitutive 0 NULL GeneID:782988 5 GENE MTERFD3 NULL MTERF domain containing 3 EMBV3_02723 AGATTTCCTTTTTGGCCAGGATTTATCTATTGTACCACCTTTAGGCGTAGACAGTCCATG Gene GeneID:527140|CALCRL:NM_001102107:7_cdna Constitutive 0 NULL GeneID:527140 2 GENE CALCRL MGC155061 calcitonin receptor-like EMBV3_10801 TGCTAGGAGGCTGCACTCCTGGAAAAGTCAAAATCACACTGGTCATACTTGGATTTCCCA Gene GeneID:505696|PTPRB:XM_002687379:22_cdna Constitutive 0 NULL GeneID:505696 5 GENE PTPRB NULL protein tyrosine phosphatase, receptor type, B EMBV3_38938 TGAGAGAGAGTAGGGTCTTTGCTGTATTGAATGCTGCCACTCTTATAGAAATCAATCTTG Gene GeneID:767897|C9orf64:NM_001076978:70_cdna Constitutive 0 NULL GeneID:767897 8 GENE C9orf64 NULL hypothetical protein C9ORF64 EMBV3_40566 AACTTGCCTTCTTGCTCAAGTTCACCTCTGACTCCAAAATCAGCGCCTAGCTGCTCTCGG Gene BVT0102_118131 + 0 NULL GK000025.2:42175384-42221369 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29220 TCCAACAGCGAAAGGGAAGCAAGTCCTCCAGGGAGTTTGATGGAACCAAGCACCGAAGAA Gene GeneID:513680|NHSL2:XM_002700012:27_cdna Constitutive 0 NULL GeneID:513680 X GENE NHSL2 NULL NHS-like 2 EMBV3_29880 GAGCCACAGAGGGAGACATGGAAATGCTGTTAATGTAATTTGAGGGGCCCATACCAGCTC Gene GeneID:507439|NMUR2:NM_001035048:2_cdna Constitutive 0 NULL GeneID:507439 7 GENE NMUR2 NULL neuromedin U receptor 2 EMBV3_23926 CGAGAGTCCCATAATGCCGGGCATAGAGGTTGAACAAGAAAATGACCAACAGCCATTACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35762 TCCTGACACCGGCAAAGGGTAACATTCGTTTCTACAGATGACTTGCTGGACTGCTTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20785 TCACCCATTGTCCTTTGTAGACTAACCCTCTCTGTACCTGAAGACTGACATGCCCTTGGC Gene GeneID:539463|ZKSCAN2:XM_002698002:103_cdna UTR3_Alt 2 NULL GeneID:539463 25 GENE ZKSCAN2 NULL zinc finger with KRAB and SCAN domains 2 EMBV3_10450 CGTGAAGTGTGATTGTTTTCGCTTTTGTGTACCCACCCCATTACCGAAGCTGCCTTTGTG Gene GeneID:510698|VAT1:XM_002696003:403_cdna Constitutive 0 NULL GeneID:510698 19 GENE VAT1 SLC18A1 vesicle amine transport protein 1 homolog (T. californica) EMBV3_33102 GGTAATAAGGATTGAGTAGCATCATCTGGCTATGTTTCCCAGGTGGGGAGTAGGGGTAGG Gene GeneID:509943|TSN:NM_001075422:8_cdna UTR3_Alt 2 NULL GeneID:509943 2 GENE TSN MGC143058 translin EMBV3_27777 AAAGAGCAGCTGCTCCGCCTCCTGATACAGGCCTTGTATGACCCCATCAACCCGGACAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02997 GGGCTCCCAGGATGAACACCTTCCCCAGCTTTCTGAGCTGGCTGTTCTTGAATGAACTCT Gene GeneID:100337038|LOC100337038:XM_002695802:375_cdna Constitutive 0 NULL GeneID:100337038 19 GENE LOC100337038 NULL neuroligin-2-like EMBV3_21933 ATCAGTCTGCTCACACGACAGCCACCCTTTCTCTGGTGAATGAGGCACAGTATCTGCTGA Gene GeneID:281226|MOCOS:NM_174081:64_cdna Constitutive 0 NULL GeneID:281226 24 GENE MOCOS HMCS molybdenum cofactor sulfurase EMBV3_35160 GCAGTGACAGGACTGTTGCTCATATATCCTACTTCCATTCTGCATATCCTGGAGTCCTCC Gene GeneID:781500|LOC781500:XM_002686875:9_cdna Constitutive 0 NULL GeneID:781500 4 GENE LOC781500 NULL hypothetical protein LOC781500 EMBV3_41934 CACCAAACTACAGGGGCACCTCTGGGCTTTCTGTTTCCCTCACTTTTGTGACTCTTTTCC Gene BVT0102_307084 - 1 EMBV3_21572 GK000012.2:91104280-91149272 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118445 1 XLOC_072611 NonCoding TCONS_00118445 XLOC_072611 NonCoding NonCoding - 20:72020216-72021671 - TSS88913 1455 1 TCONS_00118445_1 93 1 0 0 0 0 0 0 1.22922640129507e-05 0 0 0 3.25200270265701e-05 7.86662277434981e-07 0 0 0 0 0.000314639847975331 0.000125515593897857 0 0 0 0 1.02002268653543e-05 0.000135561637961718 1.72831205193051e-05 0.000104760541639659 1.45267449671616e-05 1.20807209703397e-05 3.30074411259793e-05 3.67015049693767e-05 0.000181813188686205 XR_232853.1 LOC101909421 PREDICTED: Bos taurus uncharacterized LOC101909421 (LOC101909421), 0.0 839 75.83 0.706529209621993 0 noncoding 0 0 0 0 -0.034142387074609 0.757033454679214 0.0101554384224792 0.848614882017471 ACACCTGGCCCGCGTCGGGGGCGGAGCGCGCACCGGGGGCGGAGCGCACCTCCTCCTAGCTCCTAGGCTGTGGGTCCTAGGTCTCAGGGGTCGCCATTGCGGCTGGGAATGCCCATTTCGTGGGCTCCTGGGTCCCCATCGATCGGCATCCAGTGAGCGGAGCGGAGAGGTGCGGACCACAGGTAAAGGAACTGGGGCTCCGTGGCACAGGGTGGAGCAGGGATCCATGTATTCCGCCCTCTCTGTTGGCACAGTCTCGGAGCCCCCTAACCTGGCGGTCGCAGAAAGGCCTCGCCATTGGGGTCAAGGCCTTTACCACTTTACCCCTTCGCATAAAGCTCAGACCCGCGCGGTTTTCCAAAGCAGCCCAGTGCCTGCAGCGAGGTCCCCAGGAAGTCTAAGGGATTTATCCTGCCTGGTGATTTCACCTGCTGGTAGTCCACAACCCTTACTCTGGCCGACTGGCCCAGCCCTGCTACCGGCAGCTTGCAGCCCAGCGGGCCCTTGACCACCTGCTGGGATGGGGAAGGGGAAGGGTCCACGAATTGCACCCTAGAAACTTAGTAGGGTGCATGGATTTAAACACGTGGTGGTCGCCCAGGCAGAAAAGAAGGGAGGAGGGCACCTTGCTGCTCTTTCATGGTGGAATCTGTGGCTGTCCTGCTGAGAGGGGGGCCTTTCCATGAGGACCCTGTGCAATAAGTGTGGTGTTTTAGAACTGAATAAATAGAACGTGTTAATTTTTTTTTTTTAAATTATGTGGTGCTTTAATTTTAAAAAAAAAGCTCCAAGTTTTTTTGCAAATTGAGGTCTAAAAATTGAAGGCCTATTTTCCTTCCACTGTGGCATTCAGTGGAGAAATGTGCGGTTTTTTTTTTTTTTTTTTAAGAAAAGAGTCAGAAAAGTGAGGGAAACAGAAAGCCCAGAGGTGCCCCTGTAGTTTGGTGAAGGCTTTAGGAGGTCACTTGTAAATGCTGCTGGCTGTAGGGAGGCAGTCTCTTCCTGTGGCTGATGGGCACAGAGCTCTGCAGGCTTGTCCTTTGCATGGATGTTCTTGTTTGTGGAAATCCAGCTCGGAGCCATCTCCTGATGTGTAAGAACTTTCCAGACTAGACCCCTAGGCAAATCCCTTAGGGCCAGGGACTCCTTCCTTCATTGTATTTGTCTGTTTGACTGAAAAGCAGCAATGACATATTTTTCTTTAAATCTGGTCTATCATCCAGGCCTTGGAGTAATATTTCCCATCCCTCTCAATAGGCTTGGGTTCCAGGAATGAACTATGGTCAGTTGTCCATGATTCTACAGATGAGGACACTGAGGGTGGAGGACTGTCTAAGGGAGAATGGAGATCCTTCCAGGAACCCTGGCTCCTGGGTTTTTAATGAGCTTCCTACCCAGCACGGTCATTGATTGGCAAGTGTTGACATTGAGAATAAACTATTGGTGGAAATGTGA TCONS_00115351 . 5' 30852 TCONS_00115351 . 5' 30852 EMBV3_25448 GGCTCCTACAAGTGCATCAAGTGCAGCAAGGAACGGAGCTTTGACTGTAAGATCTGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16956 AGGAGTGATCCTTGTGTTTTCTATTTCCACATTAGCCATCCATATCCAGGTGTGGCCTGG Gene GeneID:509943|TSN:NM_001075422:8_cdna Constitutive 2 NULL GeneID:509943 2 GENE TSN MGC143058 translin EMBV3_15125 GTCCGGCTCACCTGACGTTAAACAGCGAAGGCAAGGAAGAGTTTGTGGCGACCTTCAAGG Variant GeneID:537808|NRXN2:XM_002699334:190_cdna 773^844 1 EMBV3_41575 GeneID:537808 29 GENE NRXN2 NULL neurexin 2 EMBV3_21773 ACTGTTGTAACACCTTCAAGTAACTCCTCCCATACTACCTCACCTGCCTCTCATCCAGCC Gene GeneID:100297468|LOC100297468:XM_002687558:578_cdna Constitutive 0 NULL GeneID:100297468 5 GENE LOC100297468 NULL similar to CD24 antigen EMBV3_36163 AAATTTCTCACCGGAAGCTGAAGCACGTGGAGAGCTTTGGGGACCAGGAGCACGTCACCC Gene GeneID:511975|LOC511975:XM_002689578:18_cdna Constitutive 0 NULL GeneID:511975 8 GENE LOC511975 NULL similar to low density lipoprotein receptor-related protein associated protein 1 EMBV3_12212 AAGCCTTAAACAGCAGCAGTGTTGTCTGGGAGCTGGATGACGGCCTGGATGAAGCATTTT Gene GeneID:511199|LDLRAP1:NM_001083668:132_cdna Constitutive 1 NULL GeneID:511199 2 GENE LDLRAP1 MGC157309 low density lipoprotein receptor adaptor protein 1 EMBV3_28575 ACCTTTATTTTTGAACTAAGTTTAGGATTTTTATTAAGTGACTAATTTGAGTGGTTATTC Gene GeneID:615687|TMX3:NM_001102289:124_cdna Constitutive 2 NULL GeneID:615687 24 GENE TMX3 MGC152463 TXNDC10 thioredoxin-related transmembrane protein 3 EMBV3_22704 CTCAAGGACATTTATGAGAAGCAACAGTTGGAGGCTGCCAAGGCAAAGAGTGAAGAGGAG Gene GeneID:509032|ANKMY2:NM_001075384:20_cdna UTR3_Alt 2 NULL GeneID:509032 4 GENE ANKMY2 MGC140747 ankyrin repeat and MYND domain containing 2 EMBV3_06278 GTCACCCCATCCCTTTCTCTTTATAGAAGCAGATGCAAAAGTGTTCCACTGGGCTTTCGG Gene GeneID:618601|ULK2:NM_001102321:114_cdna Constitutive 2 NULL GeneID:618601 19 GENE ULK2 MGC160050 unc-51-like kinase 2 (C. elegans) EMBV3_10265 CCTGAGAGGCATTCCAGGCATTTGGAGGAGGGTTTGGCGCAGAAGTTCCCTTTGGTACTG Gene GeneID:526547|LOC526547:XM_002707706:676_cdna Constitutive 0 NULL GeneID:526547 21 GENE LOC526547 NULL similar to Chromosome 14 open reading frame 73 EMBV3_27451 TGGGAAGATTCCACAGGCCGCGGAGCATCTAAATCCAAGCACCACAACTACTCAGCCTGA Gene BVT0102_049966 + 0 NULL GK000023.2:17269820-17585592 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132599 TCONS_00132600 1 XLOC_080821 NonCoding TCONS_00132600 XLOC_080821 NonCoding NonCoding - 23:17496104-17497002 - TSS99164 898 1 TCONS_00132600_1 55 0.310690423162583 1 0 0.000212114789482673 0.00163125709273777 0.00140779754544609 0.000212689361785699 0.000192429174690275 1.1950040217227e-05 0.000142860633190664 0 0.000215265381896969 0 0 0 0 0 0 0 0 0 1.30848577308796e-11 0.000247096887613332 0 0 0 0 0.00186989560022931 0.00122393446540179 0.000915782483214461 0 0 0 XR_228569.1 LOC101903564 PREDICTED: Bos taurus uncharacterized LOC101903564 (LOC101903564), 1e-43 181 73.78 0.304008908685969 NR_024478.1 LOC100132354 Homo sapiens uncharacterized LOC100132354 (LOC100132354), 1e-11 75.2 82.93 0.0879732739420935 0 noncoding AACACAGCCAAAAATAAAGAAATATTAAAAAAAATAAGATGGCGCTGAGTTAGACCATGTGGTGATATGAGATTCACCTGGTATAACGGGTGGGCAAAGTGTGTGAATGACAAGCGTCTGTGTGTGCTGGGTGTGGGGCTTTCCTCTTCCGCAGAACACCTCCAAGGGCTCAAGAAGCCCTGGGCATTCCTGTCATCAGCTCTGAGTGGTGAAAATAAGCCCACAAGGGTCTAAAGTGGGAGCTGACCTCACTCAGGCCCTGTCAGGAACTTGGAGAGAGTCAACGTGGGAGCCCTTGGTCACTAGCCCTCCTCCTCCCCCAACCTCAGTGTTGCTTTGATAGTGAGTCGCACCTAAAGCCGCAGGTGTCCCCTGAGGCAGGGGCTACGCACTCCCGTAGACTACGGCTCCCTGAGGCAGGGCTGTGTCCCCCCTCAGACTGGGGCGCCTATCCCCTCTCAAACCCCAGGACGGGAGTCTCAGCATCGGCCTCCCCTGCTGTACTCACGCACCGCTGAGTGACCACCCAAGGGGACAGGGTGACTGGTCCTGACAGAGGCACAGGGCAGGGCGGGGCGCTGCTGAGGAAGAATGTGCGGATGAAGGGTCACTTCTTAGGGCTCCCCTGGCAGCTCAGTGGTAAAGAATCCATCTGCCGGTGCAGGAGACACAGGCTGAACCCCTGACCTGGGAAGATCCCACAGGCCGCGGAGCATCTAAATCCAAGCACCACAACTACTCAGCCTGAGCTCTAGAGCCTGGGAGCCGCGACTGCTGAAGCCCATGCACCCTGGAGCCCGTGCTCTGTGACAAGAGAGGCCACCGCAGTGAGAAGAACTCGAGAGTAGCCCCCACTCACCACAAGTAGAGAGAAGCCTGTGCAGCCATGAAGACTCAC TCONS_00134324 TCONS_00134325 TCONS_00134326 TCONS_00134327 r 3' 88591 TCONS_00134324 TCONS_00134325 TCONS_00134326 TCONS_00134327 r 3' 89488 EMBV3_35031 GTACCGCCTGGGCTTCCTTGGCTTTTTCAGGTCCTGTCCCCGCTGGCTGCAGGGCTGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28283 GAGCTAGATCCCACATGCTGCAACTAAAGGTCCCATGTGCTGAAACTAAGACCTGGCAGA Gene GeneID:509680|PIGM:NM_001015563:254_cdna UTR3_Alt 2 NULL GeneID:509680 3 GENE PIGM NULL phosphatidylinositol glycan anchor biosynthesis, class M EMBV3_12815 GGTGGACACCCAGGTTCAGGAGCTCTTCCAGGATCAACCAACTTCTTCAGAGCCTGAGAT Gene GeneID:617670|PPP1R14D:NM_001099169:202_cdna Constitutive 0 NULL GeneID:617670 10 GENE PPP1R14D MGC159392 protein phosphatase 1, regulatory (inhibitor) subunit 14D EMBV3_39347 TTGGTAATTCAGTGACTGCCATAAGAAACAATGGGAAGCGGTTTGGGTGCTGCACTGGGG Gene GeneID:511560|IMP3:NM_001079588:61_cdna Constitutive 0 NULL GeneID:511560 21 GENE IMP3 BRMS2 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) EMBV3_03144 TCTCTAATCCTTGCTACCTGGGTGAGAGTGCTTTCTGAATGCAATGCACCTGGGCAAGGA Gene GeneID:100313059|MIR500:NR_031323:6_cdna Constitutive 0 NULL GeneID:100313059 X GENE MIR500 bta-mir-500 microRNA mir-500 EMBV3_29477 CCTCAGGACACACATAACTATACTGATTCCCAAGACAATTGGTTCTGCTCAGTCTCAGGT Gene GeneID:790053|BOSTAUV1R430:XM_002695461:137_cdna Constitutive 0 NULL GeneID:790053 18 GENE BOSTAUV1R430 NULL vomeronasal 1 receptor bosTauV1R430 EMBV3_13861 CCTGTTGCCAGCATGAGGATGAGAAGGGGAAAGGGTGTTACTTCTATGTACAGCAGAGAC Gene GeneID:512631|SRPK1:XM_002697203:86_cdna Constitutive 2 NULL GeneID:512631 23 GENE SRPK1 NULL SFRS protein kinase 1 EMBV3_29979 CAACTGTGTTGAACCGAAACCTCCCGGCCTGATCCTGCCTGATTTGCTCTGAAAGCTCCT Gene GeneID:533098|SYNRG:NM_001102152:271_cdna Constitutive 0 NULL GeneID:533098 19 GENE SYNRG AP1GBP1 MGC157114 synergin, gamma EMBV3_02220 TTCTGAGTTTCTTCTTCCATTGGGGGGAAAAAAGTATTGAGTTATGACTCTTGAGCAGAG Gene GeneID:507632|YES1:NM_001101060:59_cdna UTR3_Alt 2 NULL GeneID:507632 24 GENE YES1 NULL v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 EMBV3_09652 TCATGAGAGCATAACAATCTGGATTATCTAACATTGTTAGCCCTGTGTATGTACAGTTCC Gene GeneID:514920|KBTBD2:NM_001102013:51_cdna Constitutive 1 NULL GeneID:514920 4 GENE KBTBD2 MGC166266 kelch repeat and BTB (POZ) domain containing 2 EMBV3_05862 CTGTCCAGCAGCACCAGATGGTTAATCAGGCACTAAAAGAAGAAATTAAAGGTATGCATG Gene GeneID:614629|BOLA3:NM_001035452:63_cdna Constitutive 0 NULL GeneID:614629 11 GENE BOLA3 MGC128418 bolA homolog 3 (E. coli) EMBV3_43049 GCCCATCAGCGAGCAGAATTTCGAGGCGTATGTCAACACGCTCACAGACATGTACAGCAA Gene GeneID:536336|ST18:XM_002692661:105_cdna Constitutive 0 NULL GeneID:536336 14 GENE ST18 NULL suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein) EMBV3_31121 CATTCGTCTGGTTAAGGGAATTTGGGTTACTCCCAGTTTTGACTCTTCTAAGTAAAGCTG Gene GeneID:789989|ZNF211:XM_002695445:90_cdna UTR3_Alt 1 NULL GeneID:789989 18 GENE ZNF211 NULL zinc finger protein 211 EMBV3_16655 ATCTCAGCCGACACCATCCTTCTTCTCTTGCACGTCTACACCTTCCTTCTCGAGCACAGA Gene BVV0102_315323 - 1 EMBV3_24124 GK000022.2:58754570-58782245 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127635 1 XLOC_077702 NonCoding TCONS_00127635 XLOC_077702 NonCoding NonCoding - 22:58763040-58769390 - TSS95430 562 1 TCONS_00127635_1 84 2 0.911797133406836 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000518945853622169 0 4.69957333008287e-05 0 0.000803624463414434 0 0 0 0 0 0 0 0 0 0 0 0 XM_601821.1 BOSTAUV1R437 PREDICTED: Bos taurus vomeronasal 1 receptor bosTauV1R437 (BOSTAUV1R437), mRNA. 1e-59 233 82.68 0.409252669039146 NM_053224.1 Vmn1r54 Mus musculus vomeronasal 1 receptor 54 (Vmn1r54), mRNA. 9e-24 114 75.00 0.329181494661922 0 noncoding 0 0 0 0 0.00976245555558011 0.932549575387532 -0.0274528341597171 0.664268173660059 GCATAAGACAGCATCTTTACTTCCCTGGTGGCTCAGCTGCGTTCTGAGACCCAAAGATGTCTGTACCTATGAACCCCACGGCTACTAGCATGACTATGTGGATTAGGGCCAAGTGACTAATCGTCAGATCCAGTGGGCTCGGGTCTGTGCTCGAGAAGGAAGGTGTAGACGTGCAAGAGAAGAAGGATGGTGTCGGCTGAGATCCCAATACCAACCTCGCAGAAGAATGCATTTCTTACAGCAAAAGAACTGGAGGGTTTATCTTTATCCATCTCTATGGGGACATATATTTGTAGTAAACATCTGAAGAGAAAAACAAGAAAAATTCTCTTTACCACAAATATTACCTTCACCATTTTCAACCAACTCTATTACCATCATGAAAACACGTGGACTGATCCAAATGCATCCGTGTTCGGGTCCACGCATCCATGGGCTTGATACTCAAGTCTGCCTTCGCGCCTACCTGGATGCCGTTACGTTTCTCTCCCCCAGCCCACCCCTGCGCAGCCCATCCACGGTGGATAATGTACCCCACTACTGGGCTGGGCTCTAGCGGCAC TCONS_00127633 TCONS_00127634 s 3' 7783 TCONS_00127633 TCONS_00127634 s 3' 7783 EMBV3_20560 CCCCTGGTGCCTAGGACCTCGCAGAGCCACCCCCTGGAGCCTAGGATCTCTCAGAGCTAC Gene BVV0102_253385 + 0 NULL GK000025.2:13706348-13758073 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146338 TCONS_00144588 2 XLOC_089074 XLOC_088594 Coding TCONS_00146338 XLOC_089074 NonCoding NonCoding - 25:13753512-13755813 - TSS109437 2121 1 TCONS_00146338_1 273 2 0.0786956521739131 0.000399002203236886 0.00013457822599775 0.00030201898204407 0.000869192455931981 2.2650685825982e-10 2.91005428989482e-05 0.000108015462786093 1.01045889225317e-10 0.00010695949348083 3.29576236015968e-06 5.39643901896252e-06 0 0 8.70623472515153e-05 5.95697218821608e-05 2.17712767592913e-05 0 0 0.000125093967166379 0.000152098048983479 0.000748070001771635 6.84956136733396e-05 1.60554858648528e-11 0 5.31020833305539e-05 0.000241204341568091 0.000389959032068778 9.05701267125568e-06 0.000261355587895172 0 XM_005196924.1 LOC101902664 PREDICTED: Bos taurus helicase SRCAP-like (LOC101902664), 0.0 2553 95.51 0.731730315888732 XM_003945980.1 A930007A09Rik PREDICTED: Mus musculus RIKEN cDNA A930007A09 gene (A930007A09Rik), 4e-35 154 78.89 0.0843941537010844 0 noncoding 1 1 1 1 0.0999060984294728 0.667112146432611 0.0286133482810172 0.6103783619154 TTGGCGGAGGCCTGAGGGCCACTCAGAGGGCTGGGGTCTGCTTCTGTCCTAGATGGAGTGACTCTTCTTCCCTCGGGCCAGGGTGGGGGTCCTCCCGGAGGGCACTGACTGCTGGGCTTGAGCAGCTGGAGCTGGAGACTGAGGAGGCAGGGCTGCAGCGTCCGGACGGTTCTGACTTAGCTCCTGGTCCGCTGGTGGCGGGGTCTCAAGATCAACTGGCTGTGTGTGAAACTCCCAGGCAGATGGAGGCTGGCTTGGTCTAATTTCCTGGACTAAAGAGCTGCTCTGGGAGGCCTGCTGGGTGTGATACGTGGCCTGAAGGTCCAGAATAGCCTGGACTACCTGAAGGTCCACAGGCTGGGTCTGCAAAGACTCGGTGGGCAGAACCTGGAGCAGAGAGATGGTGGCCAGACTCTGGGCCTGGGAGGCCTGAAGAGGTGGTGGTCCAGTTTGACAGACCTCCAAAAGATTCTGAAGCTGCTGCTGAGAGGCCACAGGCACCAAGGAGTGGCCCTCAGAGGCCACAGGCACTGGGAGCTGGCTTTGAGAGGCCACAGGCACCAGAGGATGGCTCTGAGAGGTCCTAGGCATCAGGGGGTAACTCTGAGAGGCTCTAGGCACCAGGGGGTGGCCCTCAGAGGCCACAGGTACCAGGGGGTGGCCCTCAGAGGCCACAGGCACCGGAAGCTGGCTCTGAGAGGTCCTAAGCACCAGGGGGTAGCTCTGAGAGATCCTAGGCTCCAGGGGGTGGCTCTGCGAGGTCCTAGGCACCAGGGGGTGGCTCTCAGAGGCCACAGGCACCAGAGGGTGGCCCTCAGAGGCCACAGGCACTGGGAGCTGGCTCTGAGAGGTCCTAGGCATCAGGGGGTGGCTCTGAGAGGTAAGGATGGTCAGAGGCTGACTTGCAAAGGACGAGGAGACAACAGGCAGGCTCTTAGAGGCAAAGACCACCTGAGGCTGAATAGTAGAAGTCAGGGGGACAACAGGCTGTCTTGTAGAAGCAAGAGTGACTGCAGGGGCCTGGCTTGTAGAGGAAACTACAGGCTGGCTTTTAGAAGTCAGGAGACGTGGAGGCTGGCTAGTAGAGGCCAAAGGGGCTGCAAGCTGGCTCACAGAGACAAGAGTCACTGCAAGGGGCTGGCTCGTAGAGACCAAGTCTACTACAGGCTGGCTCTTCGAAGTCAGAATAGGGGCAGTTTGGCTCATAGAGGCCAAGGAGACTACGGGCAGGCTCTTAGAAGTCAGGATGACTGGAGTTGGAGCCTGCTCCAGAGGAGATGGCGTAAATGGCTGCACCAGATTGGTCGATGGTCCCTTAACGAACTTTGGGAGACTAGCCTCACGGCCCAGGTCACCAGCATCGGGCACCTGGGAGCCAGCTTCCTTTAAAATTTTGACAGCTTCAGGTTTGGGGAGATCCTTGCTGCCAAAGTCCTGAGGCTCGCCCTTCTCCGCAGCCCCTTCTGCCCGGTCTTCGTCTTGGTCTAGCTGGCTTTCGACCTGGCCCGTGACGGTCATATCCAGAGATGTCCGCCCTTTCAGGAACCTCTGGCGTTGTCGCCGCCGCCGCCGTATCCGCATAAAGGTGTTGGAAACGCTGCCTATGGTTAAAGTGAAGCGGTTGCTGATGGTCTGGCTCAGGACTTCCAGCGTGTAGGCAGAGGGCAGGCGGTAGGGGCTGTTGAAGGCCTCTTCAGAAGACAGTTCGATGTTACCGCTGTACCAGAAAGTCCACCAGAGGAGGCTGAGGAAGACGATGCTGGCACCCAGGTAGAGCAACATGTCATAGTAGAGTATACGGGTAAAGACCCCAGTGAACAGCATGGCCGCGCCCACCGTGTCGAAGGTGATGCCCAGCCAAAAGAAATGCTTGCAGCGGCCCAAGCACGACCGCTTCTCGATCTTGGCGACGTGGTTAACCGAAACCTCCATGAGCCCCGACTGTCGCTGTCGCCGCCGCCGCCGCCGGGTCCGCAGAAGCTACCAGGCAAGCGGCGTCGCCACAGGCCGGCAGGGGCCGCTGGGTCGCCACGGCGACGCGTTGGGGGCGCGCCAAGAAGGAGGCAGGACAAGCGTTCGGGAAAGCTCGGCCGCCGCCCACTTGCGCGGAGAGGCGGGGCG TCONS_00144589 TCONS_00144590 r 5' 23763 TCONS_00144589 TCONS_00144590 r 5' 22816 EMBV3_05490 AGCACTTTGCAGTTCAGAAAGCCGATTCCCTCAGTCACTTTCTTGCATCCATTCAGGGCC Gene BVV0102_282728 + 1 EMBV3_30871 GK000028.2:36211731-36934599 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36807 TCACCAAAGTCCAAGAAACCCATAGAGTCCCAACAGGATAAACCCAAGGCAGAACACCCC Gene BVV0102_260948 + 0 NULL GK000003.2:63577686-65084064 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42750 ACCCAGGGCCCCCAGCCCAGGGACCTTGCTCCAAGTGGAAGCATCCTTTCAATCGTTACC Variant GeneID:538280|SERPINA11:NM_001099083:277_cdna 67^712 1 EMBV3_06470 GeneID:538280 21 GENE SERPINA11 MGC159632 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 EMBV3_02329 CCCCCCACCAGATACGCACTGGACCCAGCTCTTGTGGAACATGGGCATTAATTTTTTGAC Gene GeneID:281638|ARRB2:XM_002695776:272_cdna Constitutive 0 NULL GeneID:281638 19 GENE ARRB2 NULL arrestin, beta 2 EMBV3_34221 TATGGCTCCTCCATGTTACTGTATATATATCTGCCAGCACGTCCCAGTTACACTCCTGTG Gene GeneID:521194|MAML2:NM_001098050:11_cdna UTR3_Alt 2 NULL GeneID:521194 15 GENE MAML2 MGC143419 mastermind-like 2 (Drosophila) EMBV3_24675 CTTCTTCCCCCGCAGCATGGCTGGGTTCTACGCCAACCTTGAGAAAGCAGTGAAGAAATT Gene GeneID:512369|STARD4:NM_001080265:27_cdna Constitutive 2 NULL GeneID:512369 21 GENE STARD4 MGC155130 STARD5 StAR-related lipid transfer (START) domain containing 4 EMBV3_40194 ACTGGGGACAGCAGTCTGTATTGGGTAGGAGTGGAAGGCGATGTGTTTACTAACTGCCTG Gene GeneID:539284|TSPAN33:NM_001034672:12_cdna Constitutive 0 NULL GeneID:539284 4 GENE TSPAN33 MGC127515 tetraspanin 33 EMBV3_37396 GAGGACACGGGCAAGAATAATGCTGGAAGGACCATCAGCCTTGTCCTCCAGATCTCCCTT Gene GeneID:100294929|LOC100294929:XM_002698726:175_cdna Constitutive 0 NULL GeneID:100294929 27 GENE LOC100294929 NULL hypothetical protein LOC100294929 EMBV3_41705 TGCACTACTCCGACGAAGACCTCTGCAACAAGTACAACGGCGCCGCGCTGACCGAGAGCG Gene GeneID:516333|SDK1:XM_002698164:638_cdna Constitutive 0 NULL GeneID:516333 25 GENE SDK1 NULL sidekick homolog 1, cell adhesion molecule (chicken) EMBV3_39836 TCTTTGCAGGGAGTCTTTCTACTCCTCCCCCCAAACAAATTTTTAAATAAAGTTAAAAGT Gene BVV0101_028139 + 0 NULL GK000002.2:13665328-13724667 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101628 TCONS_00101631 TCONS_00101632 1 XLOC_061725 Coding TCONS_00101632 XLOC_061725 Coding Coding NCKAP1 2:13574039-13666805 = TSS75901 5458 1 TCONS_00101632_2 1102 31 0.941497331967876 0.00276582931845149 0.00276784284333399 0.00246283135287882 0.00287401471600947 0.00329131606480747 0.00173372749363199 0.0027707519879867 0.00105992416695084 0.0046965841568136 1.29347539025124e-06 0.000514175964981036 0.000330262949326077 0.000266715945733206 0.000653321027723725 0.000964938547408857 0.00870852325229216 0.00884387107854772 0.00374235675765865 0.00142097549586986 0.00343646233710454 0.001526215365795 0.00479992232873182 0.00346832744625813 0.00720411155058129 0.00290256641288064 0.00203912088637618 0.00239191223357489 0.000739389119332623 0.000345571227569666 0.000784454690485427 XM_005202306.1 LOC101907541 PREDICTED: Bos taurus nck-associated protein 1-like (LOC101907541), 0.0 9468 100.00 0.961707585196042 NM_205842.2 NCKAP1 Homo sapiens NCK-associated protein 1 (NCKAP1), transcript variant 0.0 6387 94.42 0.755588127519238 TCONS_00101632_2 sp|Q9Y2A7|NCKP1_HUMAN NCKP1_HUMAN Nck-associated protein 1; 0.0 2275 99.18 0.999092558983666 1 coding 0 0 0 0 -0.373021212274798 0.0309794436403256 -0.0895716963063645 0.0951264782861563 ATGCTTCCCCAGCAAGGACAAGTTTGGAAGGCTTGTGGAGACCCCAAGGCAAAACCATCCTACCTTATTGACAAAAACCTGGAATCTGCTGTGAAATTCATAGTCAGAAAATTCCCTGCTGTAGAAACTCGCAACAACAATCAACAGCTTGCACAACTGCAGAAAGAAAAATCAGAGATTCTGAAAAATCTGGCATTATATTACTTCACATTTGTAGATGTTATGGAATTTAAGGACCATGTTTGTGAATTGCTGAATACTATTGATGTTTGCCAAGTCTTCTTTGACATTACTGTAAACTTTGATTTAACAAAGAACTACTTAGATTTGATCATAACATATACAACACTAATGATACTGCTGTCTCGAATTGAAGAAAGGAAGGCAATCATTGGATTATACAACTATGCTCATGAGATGACCCATGGGGCAAGTGACCGAGAATACCCACGCCTTGGTCAGATGATTGTGGATTATGAAAACCCTTTAAAGAAAATGATGGAAGAATTTGTGCCCCATAGCAAGTCTCTTTCAGATGCACTAATTTCTCTTCAGATGGTGTATCCTCGAAGGAACCTTTCAGCTGACCAGTGGAGAAATGCCCAGTTGCTGAGTCTCATCAGTGCCCCCAGCACAATGCTTAATCCCGCACAGTCTGACACTATGCCTTGTGAATATCTCTCTTTGGATGCCATGGAAAAATGGATTATCTTTGGCTTTATTTTGTGCCATGGGATCCTAAATACTGATGCAACAGCACTGAACCTTTGGAAGCTAGCTCTTCAAAGTAGCTCTTGCCTCTCTCTTTTTCGAGATGAAGTTTTCCACATTCATAAAGCTGCAGAAGACTTATTTGTAAACATTCGAGGGTATAATAAGCGTATTAATGACATAAGAGAATGCAAAGAGGCAGCTGTGTCACATGCTGGTTCAATGCACAGAGAAAGACGCAAGTTTTTAAGGTCTGCACTGAAAGAATTGGCTACTGTCCTCTCTGATCAGCCTGGCTTGCTGGGTCCTAAGGCACTTTTTGTTTTTATGGCATTATCCTTTGCCCGTGATGAAATTATCTGGCTACTTCGTCATGCAGATAACATGCCAAAGAAGAGTGCAGATGACTTTATAGATAAGCACATTGCTGAATTAATATTTTATATGGAAGAGCTTAGAGCACATGTAAGGAAATACGGACCTGTAATGCAGAGATATTACGTGCAGTACCTTTCTGGCTTTGATGCTGTTGTCCTCAATGAGCTTGTGCAGAATCTTTCTGTTTGCCCTGAAGATGAATCAATCATCATGTCCTCTTTTGTTAACACTATGACTTCTCTAAGTGTAAAACAAGTTGAAGATGGGGAAGTATTTGATTTCAGAGGAATGAGATTAGATTGGTTTCGATTACAGGCATATACTAGTGTCTCTAAGGCTTCACTTAGCCTTTCAGATCACAGAGAACTTGGAAAGATGATGAATACAATAATTTTTCACACAAAAATGGTAGATTCCTTGGTGGAAATGTTGGTGGAAACATCAGATCTGTCCATATTTTGTTTTTATAGTCGTGCTTTTGAGAAGATGTTTCAGCAGTGTTTGGAGTTACCCTCTCAATCAAGATACTCAATTGCATTTCCACTACTTTGCACTCATTTTATGAGTTGCACACATGAACTGTGTCCAGAAGAGAGACATCATATTGGAGATCGCAGTCTTTCCTTATGTAATATGTTCCTTGATGAAATGGCCAAACAAGCTCGAAATCTCATCACTGATATTTGCACAGAACAGTGTACTCTTAGTGACCAGTTATTGCCCAAGCATTGTGCCAAAACCATCAGTCAAGCAGTGAATAAGAAGTCAAAGAAACAGACTGGTAAGAAAGGGGAACCTGAAAGGGAAAAACCAGGAGTTGAAAGCATGAGGAAAAACAGGCTGGTCGTGACCAACCTTGATAAGTTGCACACTGCACTTTCCGAGTTGTGTTTCTCTATAAATTATGTACCAAACATGGTGGTTTGGGAACATACCTTTACCCCACGAGAATATTTGACTTCTCATCTGGAAATCCGCTTTACTAAGTCAATTGTTGGAATGACTATGTATAATCAAGCCACACAGGAAATTGCAAAACCATCAGAGCTTCTAACAAGTGTAAGAGCATACATGACTGTACTCCAGTCAATAGAAAACTATGTGCAAATTGATATTACAAGAGTATTTAATAATGTTCTTCTTCAACAAACACAACATTTAGACAGTCATGGAGAACCAACCATTACAAGTCTGTACACAAATTGGTATTTGGAAACTTTGTTAAGACAAGTCAGCAATGGTCATATAGCTTATTTCCCTGCAATGAAAGCATTTGTGAACTTACCTACGGAAAATGAATTAACATTTAATGCAGAGGAATATTCTGACATATCAGAAATGAGATCATTATCGGAGCTGCTTGGCCCATATGGTATGAAGTTCCTAAGTGAAAGTCTTATGTGGCATATTTCATCACAAGTTGCTGAACTTAAGAAACTTGTGGTGGAGAATGTTGATGTGCTAACACAAATGCGGACCAGCTTTGACAAACCCGACCAGATGGCTGCCCTCTTTAAAAGATTATCGTCTGTTGACAGTGTCTTGAAGAGGATGACAATAATTGGTGTAATTTTATCCTTCCGATCACTGGCACAGGAAGCACTCAGAGACGTCTTATCCTACCACATTCCTTTTCTTGTCAGTTCAATTGAAGATTTCAAGGATCACATTCCAAGGGAAACTGATATGAAGGTTGCAATGAATGTGTATGAATTATCATCAGCTGCTGGATTGCCTTGTGAGATTGATCCTGCCTTGGTGGTAGCTCTTTCCTCACAAAAATCAGAAAACATAAGTCCAGAAGAAGAATATAAAATTGCCTGCCTCCTCATGGTGTTTGTGGCCGTTTCTTTGCCCACACTGGCCAGTAATGTGATGTCTCAGTATAGCCCTGCTATAGAAGGGCACTGCAACAACATACATTGCTTGGCCAAAGCCATCAACCAGATCGCTGCAGCTTTGTTTACAATTCACAAAGGAAGCATTGAAGATCGGCTTAAAGAATTTTTGGCGCTTGCATCCTCCAGTCTACTGAAAATTGGCCAGGAGACAGATAAAACAACTACACGAAATAGAGAATCTGTTTATTTACTGCTAGATATGATTGTGCAGGAATCCCCATTCCTGACAATGGATCTTTTGGAATCTTGTTTTCCCTATGTCTTGCTGAGAAATGCATACCATGCTGTCTACAAGCAAAGTGTTACATCCTCTGCATAAAAGAACTACTTATTGAAGACAAGCACGCATTTTTGTTGCCTCTGTTTTATCTGTAAACTGTGGAACTGTTTGACCTTAAGACCTGAAAAACAGTTTTGTGGATTATAAATTTATTTCATATGGTTGTATTTTCTGATCATCAATTTCTTAATATGGTTGTACTTCAGTATACTTGGTTGATTTAGGTCGCACATTTACGGAATTCATTGAAATTATTCTAATAATTTTAGAATATCATTTGTTTGAAAAACATACATTCTCTATGTTTTTGATATTTGATAATGAAAAAAAACCTTTGCTTGTTTATTTCTGAAAAATAATTGTATTTAGTGATTATTTTAGATAGTGATATTATAGCATTCATCGTGTGTAAATTATTTCATATAGGGAAGAGTTCTGACCTGTACCTATTATGGTTCTTATTGAAAACAAAACTGGATGTGCATTTCTGTGATGTTATGAATACATTTCTACTTTATTTTGAAACATTTGCCAAACTAATTACTATAACACTGTATAACATTAAAAGTGTTCATGGACTGCTTAGCATTAGAAGCAGACTGTGTCCCCAAATTCTAAAACAGCAGCAAATGATGTTGCTTGTATAAAGCCTAATAATAATTTTTAGACTAATTTCCACAGTGCCCTGTTGGCGTTAGCACTACCATTGTACCCTGCTGTATAATAAACAATCTTAGACATTTATCAACTGTTGATACAAATGTTAGTCCCTAACCACTTTTTATATGTTTTAAATTTTTGAAATTCAAGTGTACCTGCCGTAACAAAATAAACACTAGACTATCACATTTTGAATGATTTCTTTTTGGGATCCTCAGAAATTTATTCAGTAAAATGGAAGTTTTTTTGTTTAAACTTAGTTTAAAATAAACTTTAGTTTATTTTAGGTATATCTAAGTAGCACATTGATACTAGGTCACCTATTATAAGATTTGCTTAAATGTTTTGAAACATATTCCACTAGAAAAAATATTAAAATTAGAAAATAAAGTTGCATAACATTTTTTAAAAGTTAAGCGCTAAAAGGAAACTTGTGTGCCATTAGCTTGCTAATTTTTATCAGTAAGAAAATGGACAGATTTATTTGAAAGATTAGGGGAAAAACACGGAATGATCACAGAACTAATGAAAATGTTGAGAACTGCTATATCGGTCAGTAATGAATGAGAAACACATAAAGAGACTATTGCTTGGCAGCTGGCATGGAAGGCAGAGCACCTCATTTAATTTGAAAACTAAGTGGATGTTTTGCTCTTTGACTAGCATTGTAAAGACTTTCTCATGAGCTGTGTATCTGGATATCATAGAGCTTCTGTTGTTCACAGCTTCTTATATATACACTGGTAACTTGTGTTAAGATAAAAGAAAGCTACTGTGAACTTAGTTATAATTTTTTTGTAGTTCAGATACTGGAATGAAATTGAAGTGCCACAAGACTATATTTCTATTTTGTGTATGGTTTCTCCAGTTTATATTTAAAGCAGGGAATAGTTGTCACTATCTGTTGAAAATTTCCAGTGGTCAGGAATTTTTTAATGACATAGTTTTAGATTTGAAATAACCTAAATACACAGTAAACAGTTGAAAGTAAGATTAAATGCTGTTTGCTCTGAAATACTAGGATCCTAGAGCGGTAATAACTTGTCAGTAGTAATATCCTCGAAGGTAAAGCAGGCATTTTGAATATATACACTTCCATTGGGGTAGTATGTGGAAGGGTGAAGACATTATTTACCCCTCTTCAGGTGAAGAGAAAAGTCACTCTTTCATAGTCCTGTCAAGTTTATCTTGCCCCAGTTTTTTTCTCATATTCCTAAACTGACTGACTAACTGGTGTACTACGGGATTGTTCTTTGCAGAGAGTCTTTCTACTCCTCCCCCCAAACAAATTTTTAAATAAAGTTAAAAGTAGATTGACAACTCCTATTTTTAACATCTTGTTTGTCTTAACTTTTCTCATTTTCTTCTGAATTTATACTGCAACATACTGTTTTTGTTGTTTTCTCTACAGTAATGTAATCATAACATATATACTTGCCTGTAATCTATTTATTTCACTCAAGTAGAAAAAGTCTGCTATTTGATATTCTTTTTAATGCCTCCTTGTATACCATAACTAGTTTAAAAG EMBV3_26301 GTTGTGAACCTAGCCTTGATGGGTCCCTACAGAACACACTCCTGTGTAAGAAGCCTGGAG Gene GeneID:513508|LOC513508:XM_002694579:645_cdna Constitutive 0 NULL GeneID:513508 17 GENE LOC513508 NULL similar to acyl-Coenzyme A dehydrogenase family, member 10 EMBV3_13543 AAGCACTTGGGGAAGAAGAGAAAGCACAGCGGAGACAGTGGTGGTCACAGCACAAAGGAA Gene GeneID:617891|LENG1:NM_001034804:34_cdna Constitutive 0 NULL GeneID:617891 18 GENE LENG1 MGC127080 leukocyte receptor cluster (LRC) member 1 EMBV3_28741 TGCCAGCTGTCCATCATGTTTCCCCACAGCAGTCCATTAAAAACATTCTGGTGTGATCAC Gene GeneID:282438|PRDX6:NM_174643:22_cdna Constitutive 4 NULL GeneID:282438 16 GENE PRDX6 AOP2 KIAA0106 peroxiredoxin 6 EMBV3_26595 CTGAAGTGGAGAATTGTGAGATGGGTTCCTCGGCTGTTGCTGGGCTCTCTGCTGATTTCT Gene GeneID:664638|T2R16:NM_001046628:73_cdna Constitutive 0 NULL GeneID:664638 4 GENE T2R16 NULL bitter taste receptor Bota-T2R16 EMBV3_21432 CAGCCTCTGCCACATAATCCTAAAAATCAGACATTTCATTGAATCTAAGATATATCACAA Gene GeneID:528650|TBCK:XM_002688086:135_cdna Constitutive 2 NULL GeneID:528650 6 GENE TBCK NULL TBC1 domain containing kinase EMBV3_17028 GGGAAAAAGTGACTGATGATGCCTGTCAGGCCACAGGCTCGGTTCTCATGTGACATCTCA Gene BVT0102_197061 + 1 EMBV3_00408 GK000013.2:38284537-38289289 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27930 TAATTAAGCAGTTGTTTCCTGATCCTCGCTGACGCCGTCCCCGCTTCAAATTCCCTGGAT Gene BVT0102_297553 + 0 NULL GK000021.2:829234-960984 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104531 TCONS_00089193 TCONS_00250272 TCONS_00009395 TCONS_00019267 TCONS_00120346 TCONS_00091893 TCONS_00226782 TCONS_00180691 TCONS_00037634 TCONS_00188655 TCONS_00036950 TCONS_00197812 TCONS_00135618 TCONS_00118519 TCONS_00037742 TCONS_00235576 TCONS_00151311 TCONS_00020508 TCONS_00118520 TCONS_00078768 TCONS_00252994 TCONS_00054539 TCONS_00220245 TCONS_00171864 TCONS_00021459 TCONS_00255156 TCONS_00202228 27 XLOC_062403 XLOC_053978 XLOC_153215 XLOC_004951 XLOC_009947 XLOC_073143 XLOC_056664 XLOC_138080 XLOC_110458 XLOC_021464 XLOC_114696 XLOC_021259 XLOC_119473 XLOC_081841 XLOC_072652 XLOC_021571 XLOC_144254 XLOC_092080 XLOC_011183 XLOC_047655 XLOC_155935 XLOC_032348 XLOC_133562 XLOC_103929 XLOC_012132 XLOC_158088 XLOC_123873 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_23864 GGTGCTCCACTGTTTATTTCAGGTGTGGCGAGTTCCCCTGGGTTCAAAAGTCCTGATGAA Gene BVT0102_393821 - 1 EMBV3_38534 GK000003.2:100503198-100565314 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02804 CAATGATGAATCAGGAGAAAATGCTGAGAAGCTCTTGCAGTTCAAGCGGTGGTTCTGGTC Gene GeneID:515582|UBR5:XM_002692760:106_cdna UTR3_Alt 2 NULL GeneID:515582 14 GENE UBR5 NULL ubiquitin protein ligase E3 component n-recognin 5 EMBV3_12321 CATCAAGTATGCACCAGGGCCTTCCCCACTGAACAGACTTCTCATCGTTCCCGGTACATT Gene BVT0102_066155 + 0 NULL GK000010.2:88818477-89026223 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015352 TCONS_00015351 1 XLOC_008461 Coding TCONS_00015351 XLOC_008461 Coding Coding ESRRB 10:88763704-88821910 = TSS10845 5110 1 TCONS_00015351_3 433 7 0.912327119663259 0 4.1254283528114e-08 0 2.90985817686883e-08 0 1.31448354341932e-12 0 0 0 0.001066533932507 0.00026052531420397 0.000267758143115687 1.00128414712143e-08 3.78183193468677e-05 2.55674691650103e-32 0.0206612297598637 0.0156091301682888 0.00882789463983737 2.51937174108554e-08 2.53083264734115e-08 1.03877002478493e-08 0.0159934551698839 0.00926594177329688 0.0121984542812037 2.41774615231222e-08 2.49900142434045e-08 2.01471748761136e-08 0.00567148299866481 0.00222766422147497 0.00448159078611184 XM_002691121.3 ESRRB PREDICTED: Bos taurus estrogen-related receptor beta (ESRRB), 0.0 3021 100.00 0.327592954990215 XM_005267404.1 ESRRB PREDICTED: Homo sapiens estrogen-related receptor beta (ESRRB), 0.0 2131 91.55 0.293150684931507 TCONS_00015351_3 sp|O95718|ERR2_HUMAN ERR2_HUMAN Steroid hormone receptor ERR2; 0.0 873 98.15 0.997690531177829 2 coding 0 0 0 0 -0.0831369596984564 0.585339760988489 -0.0253889976506506 0.692235434616651 AAGGTTGTGTTGTGAGGGTGGGCTTTGTGGGTGTGATAGGAGAGCCCTTCCCAACTCGGGGACCAATGCTTTCTTCAGTGAGCTGCTCAGAAAACAGGGGGCTCCCTCTGAGCATCACTGGAGGCTGCTGAACAGGATGTCCGCAGACGACCGGCACCTGGGCTCCAGCTGCGGCTCCTTCATCAAGACCGAGCCGTCCAGCCCGTCCTCGGGGATTGATGCCCTCAGCCACCACAGCCCCAGCGGCTCGTCGGACGCCAGCGGCGGTTTCGGTCTAGCCCTGGGCGCCCACGCCAACGGTCTGGACTCGCCGCCCATGTTCGCGGGCGCCGGGCTGGGAGGCACCCCGTGCCGCAAGGGCTACGAGGACTGTGCCGGAGGCCTCATGGAGGACTCGGCCATCAAGTGCGAGTACATGCTCAACGCCATCCCCAAGCGCCTGTGCCTCGTGTGCGGGGACATCGCCTCCGGCTACCACTACGGCGTGGCCTCCTGCGAGGCCTGCAAGGCTTTCTTCAAGAGGACCATCCAAGGCAACATCGAGTACAGCTGCCCGGCCACCAATGAGTGTGAGATCACGAAACGGAGGCGCAAGTCCTGCCAGGCCTGTCGCTTCATGAAATGCCTCAAAGTGGGGATGTTGAAGGAAGGTGTGCGCCTCGACCGAGTGCGTGGAGGCCGCCAGAAATACAAGCGACGGCTGGACTCAGAGAGCAGCCCATACCTGAGCTTACAGATTTCTCCTCCTGCTAAAAAGCCATTGACTAAAATCGTCTCCTACCTGCTGGTGGCTGAGCCGGACAAACTGTATGCCATGCCTCCACCCGGCATGCCAGAGGGCGACATCAAGGCTCTGACCACTCTCTGTGACCTGGCAGACAGGGAGCTCGTGGTCATCATTGGCTGGGCCAAGCACATCCCAGGCTTCTCCAACCTCTCGCTGGGGGACCAGATGAGCCTGCTGCAGAGCGCCTGGATGGAGATCCTTATCCTGGGCATCGTGTACCGCTCGCTGCCCTACGACGACAAGCTGGTGTATGCAGAGGACTACATCATGGACGAGGAGCACTCCCGCCTCGCGGGGCTGCTGGAGCTCTACCGGGCCATCCTGCAGCTGGTGCGCAGGTACAAGAAGCTCAAGGTGGAGAAGGAGGAGTTCGTGACGCTCAAGGCCCTGGCCCTGGCCAACTCAGATTCCATGTACATCGAGGATTTGGAGGCAGTCCAGAAGCTGCAGGACCTGCTGCACGAGGCGCTGCAGGACTACGAGCTGAGCCAGCGCCACGAGGAGCCTCGGAGGACGGGCAAGTTGCTGCTGACGCTGCCCCTGCTGCGGCAGACGGCCGCCAAGGCGGTGCAGCACTTCTACAGCATCAAACTGCAAGGCAAGGTGCCCATGCACAAACTCTTCCTGGAGATGCTGGAGGCCAAGGTCTGATGGCCCGGCCCACGGACGGACTCCCGCCCAAGGACAGACGGATGGACCGACGCAAACACCTCCACAGCCACCAGCCTCAACATTCAAGTCCTGTATCATGGCCGTGAGCCGTCGCGGCGGAAGGGGCTCCTCGCCTCCTGGCTGTGTGCAGAGTCCCGGGTGCTGGAGGGGCGGGGGGTACGGGGATGGAAAGGCAGGTGCGGGGCTCATCTGTAACTGGCTCTTTTTTTTTTTTTCATTTGGTATGTTGTGTTTTTTTCCTCCGCCATGGCAATGCCAAGGCCTGGGCCAGAGCTCACTCCCCCCTGAGGCCGGAGACCACCAAGGAGGAAAGGCAACTTCTCCCCACCTGATCAGCAGGAGGCAGCACATACATTTCGTAACCACTTCTCCGACATCCCCGCCCACCCATCCCGGCCTCCACCCACGGCCTGGGCGGGCAGTGTTTAGTGCCAGGACTCTGGCATACTCAGGCGGGGGTATACCTTCGGAGGCTTTCCTCTCCCAGAAAGCAGGTACTTTCTTCCAGAGGCCCTGCCTACTCTGAGGTTCTGCCCCCCAGGAGGCCCCACGCCTTCCACAGTCCAGAAGGTTTCCTCCCTCCAATCTTCACCTAGGCTCCCAGGCCAGCCCAGCTCACCATCAGGGACTAGCCGCCAGAGCTCCTGGATTTTCCTAGTCACCCCGCCCCCTTGGTGCGCCCCCCACCCGCCTTCCACTGCTGCCCCAGGGTCCCCTCCCTCTCCACCCCGGCACCCCAGGAACCCCACTGCAACTTCCTGCCCGACCTCAGAGCTCACCCCCACTGTGGGTTCCACCAGCCAAGACTTCAGGGCCCACAGGTGGGGACGGTGCTGGCTCAGAGCAGAGCAGGGTCCAAGACACCACGCCCCAGCGCCCCCTCTTCTGCAGGCTTCTCCCGCTCCCTGGGGGCAGTCCAGAGCAGGTGGGCCTGGGGTACTGAGGGATATGCAGGGACCTGGCCCCTCCGAGGGCACCCTGGGCACTTGATTCTAGGCTGGCAGCTCTAGGAGGACCCGGGTGGAATAGGGAGAGGCCCAGACCAAGCTTTGCTGAGCACAGAAAGGCCCAGAAGCAGAGATGAGCAGGCAAGGGAATTCTGAAGACAGGGGCTCCACAGAGGTCACCAGCCTGCCTGATCAGTGGACACCAGGATGCCCCCTCCCTTGTCCTCCAAAGGGCAGGGTGAGCCAGTGCTGCAGGAGGGTTTGCACCCGCCATCCTTGGACTAAGGAGGTAGAGCGTAGCTCCCCGGGTGCTCAGATGCCAGCTTTCTGGCAGGAGACCCCCACCCCCTACCAGTCCATCAGGCTGTTGTGTAAGGTGCCAACCACCCCAGTTTGCCCAGGACCCGTTTTGGCATTGAGAGTCTATTTGCCAGGAAACCGTCCAGTCCTGGCCGAATGGGAACAGTGGGTCACCCATTTCAGTGAGCGGCTATGAAAGTTCGTTATAACCCACTCGGACTGGGGGGAGGGCAACTTGAACACACCATCTGGGGCTCATGGGGTTGGCTGAGAGCAGTTTACAGGACCTCCCATGGCTGAAGGAGTTTCAAGCATCCATCCAATCAGCTGTCTTCTAAAGCAGAGATCAGAGCAATCCTGCCAGGGACACTTTCCCGGGGAGTCCAACACATTCTACCCCCGACCTCTTGTCACTTTGAAAGGCAGGCAGCTCCACCCACCTAGCCCCAGGACCAGGAGGCCAGGCATCCTCCTCCACAGCCTCGCAGCCTTCCGAGGGAAGCAGCTGGTTCTGCCTCTCCACACCCAGACACGGCTCCTTCTGAACTTTTTCTTCCAGGATGTGCTAAGGTCACCCCAGGCATGAGAGCTGGCTAAATCCCATCTGCTGCTCTCAGATACCTTCATGGAGAAAATGTCAGGGGTTCCAAGAGACTTCACAGACCAGCGAAGTATGCTCCCTCCCTTTTTTGTCTATGGGGTCTTCAAGGCCAGAGTCATTTGTCTGGCAACACTGGAATGATCCAGGGTGCTGCTAGCATCCTGTGCAGTCTCTGATCTGGGCGGATAGATGCAGCAGGTGCCTCTGAGGGACCAGGGGTAAAACCCAGGCCTGCTTAGCTGTTGGGGGCCATTCATTGACTCCCTTAGCCTCTCACTGAGTTGTGTGCTCAAGGAGGCAGGGAGCAGAGGGTCGCATCTCATCACCCCCGTTCTGTGTTAGAGTCACTGCTCGAGCGTGAGGACCTGAGCTGTGAGCCGCTGCAGGGGCTAGTTCACAACTGGTCGTCACTGTCCATCTTTTCTAGAAAAAGCACCTCTGATTAACAGTGCAACAGGTGGTTTGTGGGCGGTGGTTGTTGCATATACAGGGCAGCTTTGCCTTGCCGGAGCTCATGCATCTGCCAGTGTGCCAGCGTTAGAGCCCCTTTATACCAGAGGTGGGCCATGATCCTGATGGCTTGGTGCCACTGAGGTGGCTGCTGCTTTTACATTAAAAAACTCTCATGGCAACAGGAAATGTACCGGGAACGATGAGAAGTCTGTTCAGTGGGGAAGGCCCTGGTGCATACTTGATGGATCCATTGGCATTCAGAGAAGTTTACAGGCCAACTTCTTAGTTGGGAGCCTAGCCAGCTTTTGGGACCTCCCTGGGAAGTGGGGAGGAGGTTGGGAGGGGGGTGACTTAGTGGAGGATGTGAAGCGAGGAGAGTTTAGGACACCCCATCCCACCTAAACAGAACAAAACTTAAGTTTTCCCCCCCAATCCACTGTTCCTTGGAAATCTGTAAAGAGGACATAACCCTTCTCAGTTGTACTCTCATGATACAGGTCATTGAAATGAACCAAGAAATAAAATGGAAAAAAAATCCAACCACAGAGAAGGTGGTATTGGCTGGGTTTTGTTTGGTGCCCGTGTCCCCACACTTTCTCGAGATTCTAGACTGGCTTTGGCACATGTGAACCTTGATAAGGGCTCGCAGTTTTGGTACAGAGGAAGCTTCAGTGATTCCCAGGGCACAATTTAAGAACCGAGTAGGAAGACCAGAGCAGGATGTTGGGTGGGAGGCAGTGGCAGGGCCTTAGAGGAGCTGGAGTCTGCACCCGCCCCCTGGGTCAGGGGCCACCCTTCCCTCCAGGGTCCCCCCAGCCCCTCAACAGAAGGCAGAGGGGGTTGTGGCGAGGGGACAGAGGCCCATGCCACGGAAGAGCACCAAAGAAAAGCACTATGTGGAGATTGTTTTATTTTCTAATAAGGATAATGTGGCTGGAATGGCTTCTTAAGATGTATATATTTTTTAAAATGATGGTCCCTTATTGCATCACCACCCCTGTACATACTCCCACCTCTGTATGTGTTCTCCCAAATGCCCTAGGAGTCTTCCCATCCTGGTCCCATGTATCTGGAATCTAATAAATAAGGAATAGCCTATCAAGAGAGTCTCTTAACACATTATCTTGGCTGGCGGGCTGTCCGCTGGACAGCACTGCCTGCAGGTCTCAGGCTGATGCTAGGAGAGGCCATCGGGAGAACCAACTTGGCCTCAGGGTTCTCTGGGGGTTCAAATGGGCATTAAAATGTGTTCAGCGGCAAAATTCAGGGATGTAAATTAAGCGGTCTGAAAATCCCGTCTACTTCTTTTCAGGCTTTGAAACAATAAAAGTGAGGCCCTTTATTATTTTC EMBV3_03488 CCAATGTCACAGAAGGGAACAGTGGCATCTATTACTGTGTGGGCAGAATTCAGAGGCTGC Gene GeneID:506783|FCER1A:NM_001100310:239_cdna Constitutive 0 NULL GeneID:506783 3 GENE FCER1A NULL Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide EMBV3_01842 AGACAGCTCCCAGGAGGCGAAGGTGACAGAGGAGTGCTCTCAGTACGAGTTTGAGAACTA Gene GeneID:515723|STK40:NM_001075727:176_cdna Constitutive 0 NULL GeneID:515723 3 GENE STK40 MGC139116 serine/threonine kinase 40 EMBV3_18565 ACATGGAGAGGATGGAGCCGACTCAGGCAAAACGCTGGCTGAAATTAGTGATCGATATGG Gene GeneID:613509|DYDC1:NM_001040571:399_cdna Constitutive 0 NULL GeneID:613509 28 GENE DYDC1 MGC134202 DPY30 domain containing 1 EMBV3_07024 GAAGACACGTCAACTCTCACCAAGTGTAAAGACCTCCTTTTGCTTCACGACTCCCAGGAG Gene GeneID:530018|SEMA4F:NM_001102126:44_cdna Constitutive 0 NULL GeneID:530018 11 GENE SEMA4F MGC160077 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F EMBV3_19016 GAAACCTGTTGAGGTGGGATCATTGCTGTTTCTTTCTGCACAGGTCTGCTTTACTCAGGG Gene GeneID:527845|ACOT9:NM_001034560:26_cdna Constitutive 0 NULL GeneID:527845 X GENE ACOT9 MGC128990 acyl-CoA thioesterase 9 EMBV3_10751 GCTGTGGTCCTCATCGAAGACGCCATCCAGGATTCTGAGCTTCACCATTTTCTTGATCCT Variant GeneID:516679|TPCN2:XM_002699421:86_cdna 178^254 1 EMBV3_13557 GeneID:516679 29 GENE TPCN2 NULL two pore segment channel 2 EMBV3_19345 TGGATTTCCAGGAGGAGCCGATGACAGGATTCGTGAGTTCTCGTTAGCTGGGGGTATTTG Gene GeneID:539507|ATXN2L:XM_002698051:1_cdna Constitutive 0 NULL GeneID:539507 25 GENE ATXN2L NULL ataxin 2-like EMBV3_25562 ACAGAGGAAGAGCAGACGTGTTCCCTCACCGACCAGGGTGAGAACTTCATTGTGATTTGC Gene GeneID:508460|DOM3Z:NM_001014872:75_cdna Constitutive 0 NULL GeneID:508460 23 GENE DOM3Z NULL dom-3 homolog Z (C. elegans) EMBV3_20230 AAAGAGAAGCATGGGTACAACATGGAGCAGCTTCCTGATAAATCTATAGCAAGTCTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07404 TAAAGGAAACTTCCGAATCTGTGGATGGGTAAACACCAGGACACCCCCCAAAGTTCCTGG Gene BVV0102_063031 + 0 NULL GK000017.2:65892451-65903348 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077886 TCONS_00077885 1 XLOC_047168 NonCoding TCONS_00077886 XLOC_047168 NonCoding NonCoding - 17:65894159-65897813 - TSS58084 3360 2 TCONS_00077886_3 157 0.318452380952381 2 0.0807555433889954 9.3232656526423e-05 0.000164483355302393 6.38027772259549e-05 0.000121102150597865 6.90617116605904e-05 6.17468065680242e-05 0.000263814949708652 1.1323836304466e-10 1.17412089401205e-05 1.22455096493808e-06 0 0 4.45696539041327e-11 2.79999697810114e-06 4.19729235986885e-11 0 0 0 0.000345741128885456 0.000259277688593401 0.000118664670127113 0 0 0 0.000249105898594306 0.000123714695012275 8.71897986867226e-05 0 0 0 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 6e-54 217 83.41 0.0607142857142857 NM_052845.3 MMAB Homo sapiens methylmalonic aciduria (cobalamin deficiency) cblB type (MMAB), transcript variant 1, mRNA. 5e-131 473 72.30 0.25625 0 noncoding 1 1 1 1 0.158906413866373 0.195716333988997 0.0131707706395202 0.799877629098358 CAGTCCTTTATTGTTAAATATCCATTCTTGAATAATGAGCTCCCTATTTTTGGACATTTGTTTCCAATTTTTCTCTTTAATGAGCAGCAGGCACTGAAAAGCAAGAACAATAACCCTATGATTTCACTGATGAATCTCTTTCCTTCGGTGAAATTCTCAGACTTGGAGTTATGGGGCCAGAAGGACGCACATTTCCATGACTCGGATAGGCGTTGCCAGAGCGCCCTTCTGAGAGGTCGAACCTGACGCCACCCCCCCAACAGCGCGGAGTCAGCGTTTCTCTCTCCCCGCTGACGTCTGCAGGTGGAGATCCACAGGCTCGGAACTCTCTCCAGCTGCTGGTCCTGCAACCATATCCCCGAAGGCCCCAGGACTCCAGTTCCTCTTCTCCCAATCCCCACCCCAAAGTACCCGAGAGAACCAGTCACCAGGCAGATCCAGGGTCCCAATGCCACCTGGCGTGGCCACCAGCAGACTCCAACCCCGCTCCCCTTCCACGTGGGCGCCTGAATACCTCTTCTCGAGGCCCGCAGCCCCCACCTCTTGACGGGACAGCGAGCTTCTGAGTTATCGGCAGCCTTATTTCCCTCTACAGCTCCTACAGAGTTAACAGATGTACGCACGTCTGAGGCAGTCATGCGGCTGCCTTTGCCCTGGTGTACCGGGAGCTGGCCTGCGTCTCACCCTTCCTCGGAGAGGTCACTTGAAGCAGGGTCCTCCTGGGTTTATGGTCCCCTCTTCTCCTCCTCAAGGCTTCCCTGGTAGTTCAGTGGTAAAGAAGCTGCCTGTCAAGGCAGGAGACACAGGTTCGATCCCTGGATCGGGAAGATCCCCTGGAGGAGGAAATGGCAACCCACTCCAGTATTCTCACCTGGGAAATCCCTTGAACAGAAGAGCCTGGCAGGCTACAGTCCATGAGGTCCTAAGAGTCAGATGTGACTTAGTGGCTCAACAACTTCTCCTCCTCCTCTGCCCAAGTTGTCACACTCTCTGTCCCAAGAGGAAACTCTCACGGGAATCTGAAGACCAGTCTTCTTGTCTAGCTCTGCTACTGCCCACAGGGAGTCCACGGGCAGCGACCCCTTAAAGCTCTCGCTGGCCTGTGACCAGGTCACCTTCCCTTTCACTTTGGCCCTGGTGCTCCTGGAGCCACGTCCCCCTGGCTGACCCGGCCCCGCGAGGGGGGACCCTGTCTCCCGCAGCCTCAGGACATCTAAGCAAACCAGACATGCTGCTCAGTTGGTTCTCTGTGCATCATCTGGGCCTGAGCTATTGAAAGTGCTTTGAAAAAGGATAAACCCTTGATTCAACAACAGCTACATTTTCTTTTTTTTGAGCTACAGCCATGTGCCACGCCCATGTAGGCCCATGGGCATATTTCCTGAACTCTTGGAAGCTGGTATCATTATTCCCAAAGATTAAAGTAGGCAATGGAGGCTCAGAGTGGTTGCAGGATTTTCTCAAAGTGCCTCAGCTAGGAAGTGGCAGAGCTGGAACTTGAATTCAAATAGTAACAATCAACTATAATAATAGCAGCTAACATGTGACAGGGGCACCCTGAGCCTTTTAAACATTGCCTCATTAATCTCTCCCAGTGGCCCTGTGGGGTAGATATGCTTCACATTCCCATTTTACAGACAAAGAAGTAAGTCTCAGGAAGATGGAACGACTGGCCTGAAGTCATGACGCTAGGAAGTGACAGAGCTGGTCTTGAACCCCGGTCTGCCTGAAGCCAATGCCTGCGCTGAGCATTTGACTGTTGCTCTCACCCCTGTGCTCCTTGTCACACCTCTGTGGCTCCACATCGCTGGCAGCGAGGCTGATGAAGCAGGCAGCCCCATGCATGGATTCGCTCCTGCAGCGGGTGCTATACTGGAGAGCTAAGAGCAAGGGTTCTTCACTGGGGCTTCCACAGAGCTCTTCAGGTTGTACACAGACTGTGAACACCTGTGTGTCTGTGTCTATCCAGGGAGAAGGTGCACAGAGCCTTCATCCCAAGTCTCTGAATCTGGGGACTTCCCGGGTGGTCCAGTGGTTAAGACTCGTCGCTCCCCAATGCGGGGGACCCAGGTTCAATCCCTGCTCAGGGAACTAGATCTCACATGCCACAGTGAAGATCAGAGATCCTGTGTGCTGCCACTGAGACCCAGCGCAGCCAAATAAATAAATGTTTAAAAGAAACTTCCGAATCTGTGGATGGGTAAACACCAGGACACCCCCCAAAGTTCCTGGGTCCCCCCCCAACCAGCACGTCTCCTGCTTCAGCTCGCATCCAAGCACTGTCTCCCATGATGGACTCCCAGAGAAGAAAAGCGACAGGTCAAGGCAAATGAACCCCGCACCCCAGCTGGGCTGCAAAGGAGGCCTCGGTCCCCTCTGTAAGCAAGATCAGACCGGCCTGAAGGGAGGGATGAGGCACAAAGCCTCCCAGGCACTGATTTATGTAGCGTTCATGTGGAATTTATTACACAAAGGATTTTATTCAATTAAACTTGAAATGCGTCTGGGTTCTTAAAGGTTCAGTAGTGATAACTGGGACAGAGGGATCATAAAACTGGATGGGTTGTCGGAGAAAGGTGTCAGGGCGGGGTAGGGAGGAGATGAGGGTGACATTGCAGCTGACGGGGGGGATTCAGTACCGGGGACGTTTGTCATTGGGATGTGTTACAAGTTTGGGCTGTGAAAATTACTCGGTGAAAAAAATGCACATTAACAATAGCCATGAAATATCAGTTAAGGGAAACTAGGTTGAGAAATGAGACAGCAGAATCTATTAGCGCCTGACATTGTTCTCGGCGGCCCAGGTCATGATTAAAATGACTGTCAAATGGTGGCAGGGGGAGGGGCACCCGGCCAGGAGTCACAGGGCCACGTCCTGGGCCCACATCCTGGCGTTGACTCCCTGACACGAGTTCGTTCTCAAGTCTGTTCCCCCCACTGCTAGGAGGACACGGACGGTGCCTCCCTTGGGGCTGCTGGGTGATTTCAACAAGATAATGTCGGTGGAGCCCCCGGCCCGGGGCCTGGCATGTCAACCCTTCAGTGATGTCACCCAGTGGGCTTCTCGCTGCTGGTATATCCAACCACCTCCGGCTGTGGCACTAAATACATTCCTGAGAGCCAGACCAGGACCAGCAGGAGGCAGGTAGAGCACTTTCTTGGGTGCAAACTGTATGGAAATACCTCCAAATCCAGGAAGCAAGAGAAATAATGCTTTCATGCCATAATTTTTTAAAAACCAAAATTATGCAAAAAAATCTGATTGATAAGGTATCACAATTATAAATAAAAACTGCCTGCCCTTTCTCCCCCGACCCTTGTTACTGTGTGATGGAAACAATCATTTACGAGGGTTGACAG TCONS_00075995 TCONS_00075997 TCONS_00075993 TCONS_00075996 r 3' 1505 TCONS_00075995 TCONS_00075997 TCONS_00075993 TCONS_00075996 r 3' 4223 EMBV3_39240 CCTCGGCCGGGAGCGAGGAAGATTAACAGCCAAACACATGGAAGCTGTTAGAAGTATCAT Gene BVT0102_082751 + 0 NULL GK000024.2:35001568-35021779 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138848 TCONS_00138851 TCONS_00138850 1 XLOC_084751 Coding TCONS_00138851 XLOC_084751 Coding Coding ESCO1 24:35004791-35049522 j TSS103971 5620 1 TCONS_00138851_4 682 13 0.874647887323944 0.000517308698564021 0.000484941881820562 0.000299149504768745 0.000367462859514845 0.000363946054418653 0.000357395261323811 0.000412237977007132 0.000140984902523835 0.000441324120410847 0.000119106118911489 7.39635151716236e-05 5.68592156203496e-05 6.97674013644348e-06 1.07034363534975e-21 3.47622426133554e-23 0.00170963676545914 0.000908287426015381 0.000173548535055448 0.000356726354677451 0.000754006121567399 6.22354591854631e-05 0.000141234456178158 0.000237075464599308 9.20776597514446e-05 0.000666909039402148 0.00058794076451939 0.000241237056468273 0.00021715625307186 5.51624582462569e-05 0.000416818815186379 XM_005192993.1 ESCO1 PREDICTED: Bos taurus establishment of sister chromatid cohesion N-acetyltransferase 1 (ESCO1), transcript variant X3, mRNA. 0.0 5712 100.00 0.563345195729537 XR_243845.1 ESCO1 PREDICTED: Homo sapiens establishment of sister chromatid cohesion N-acetyltransferase 1 (ESCO1), transcript variant X1, misc_RNA. 0.0 3074 82.84 0.514946619217082 TCONS_00138851_4 sp|Q5FWF5|ESCO1_HUMAN ESCO1_HUMAN N-acetyltransferase ESCO1; 0.0 989 79.33 0.954545454545455 1 noncoding 0 0 0 0 -0.0371234017776249 0.842025171461166 0.0727864381671199 0.302963577516171 CACGCGAGGCCTCCAACCGCGCCTGCGCTGCGGCCGGACGCGGGCTCGCCTCTCCCCGAAGCCCCGCCGTCCCGGCCGGGGTGAAAAACGGCGTGACACGCAGCCAGCGTGGCGGCCATCTTCAGGCTCTGGGCACGTCAACGGAGCGGGTTCGGGCAGAAGAAGAGCGTTGCGCAAGCGCGCCCAAGACGGTCCCAGGTAACTCCCATCTGACGGGCTAGGCGTCGCCGTCGTCGCCGGAAGTTTGGCGTTTCTGTGCCGCGGGAGAGGAGGCGGCGGCGGCAGCGGCAGCGGCAGAAGCAGCTGAGTGTCTCCCGATACCCGGATGTGAGGCGGTCTGCTGGCTCGCGTCGGACCCTCGGCCGGGAGCGAGGAAGATTAACAGCCAAACACATGGAAGCTGTTAGAAGTATCATTCATTAGAAGCATCATCTATCAACTTGAAGAAAAAAATTATATGTAATTTTCATTTCAATAAGGTGCTGTATAATGTGTTAAAAGGAAATTATAAGGAATGATTTTGTCAAATTCTATGAGTTATGGTGGCTGAAAGATCAAATGTTTCTTGTGGGAAAGGAAATAAATGCCAGCACAAAAGGAAATCTTTATTAATAGAGTATTTTATTAAACGGACGTGGTTAAATAAGAACTTTAAATCAACAGACTCAGCAAACAAGCAAAGAAACGTGTTAGCTATAAGACATGTTTCTAATGAATCAAAGTCCAATAACTGTAGACTTCAGAAGAAAAAAATTTTCAAAAACTTTGTCAAATCAGACGGGTCAGTGATAAATAACTTATCCAGTCATAGGGCTAGGCCTGAAAACAAATTTAATTGAAACATTAACAAAACAGATCAAACTTGAATTAAAATTTTTGTCATAAAAAGTTCTGAAAATATTAGCTTAGATTTTAATTTTTCTCAAATATCTATTGCCTTGTCCAAAGTAAAGCAAATATTATTCAGCCTTCATGCCGTAAGGATGACAGAAATCTTAGAAGACTAGTACTTTTGTTGAAAATGTGTACCAGTATCAGTTGAATTTTTTAGACCTGCTCAGAGATAATACTAGACATTCAGCATTTATTATTTACTAGGACACAAAAATTTCGAAAATACTCAGAAAAGGAGGACCTTACTCAGAAATGATGTCCATTCAGGAGAAATCAAAAGAAAATTCCTCTAGTGTTATTAAAAAGAATGAAGATAAGAATTTAGAAACACAAGTTCAAGGTTCTCAAAAAAATCTAGCAAAAAAATCAGATCCAAAGGAAGCTATAAAATCACTGGTTAAATCTTCAAATGAAAGTAAAGTGAATCAGCCTGAATTAGGAACATGCATGAGCACAAGGTCAGCATCCACTGATAAAAGAGCTAGTAAATCTACTAATAAAAATATGGTGACTGTAAAGGGACATTCACAACAGGAATCTACAAAACAGAAGAAAATATCTCAGAAAAAAACAGTGCACGAAACCCCTAAATCAAGTGAACAGCTCAACCGGAGATCACAAAGACTACAACAGCTAACAGAGGTTTCAACAAGGTCTCTGCGTAGTAGAGAAATTCAGGGTCAGGCTCAAGCAGTTAAACAGAGTTTGCCGCCAACAAAAAAAGAGCACTGTAACAATACTCAGAGTAAATCTAATAAAGCTAAAACAAATCAGAAACATGTGAAAAGAAAAGTATTGGAAATAAAGTCTGATTCTAAAGAGGAAGAAAATTCTGTCACTAATGAAGCGATCAATTCCCCCAAAGGAAAAAAGCGCAAAGTGGAGCATCAGACGGCTTATACTTCTGGTTCTCAGTGCATAAAAGGATCTGAAAAGTGTCTGGAGAATACTAGAAAAGAAGAAACAAAATCTTCTTCTGAGATAAAAAGATCCAAAGTGGCTACTTCAGTGGTCTCTAAAAAGAACGAGATGAAGAAGTCAGTTCACACACAAGTGAATAATAGTGCAAAATCCCAAAAAAGTCCACAGCCATCAGTGCCTGAACAAACTGGAGACAATGGGCTGGAGCAAGCAGGAACAAGCAAACGCGGGAGCATTCTCCAGCTCTGTGAAGAAATTGCTGGTGAAATTGAGTCAGATACTGTAGAGGTAAAAAAGGAATCTTCACAAATGGAAAGTGTAAAGGAGGAGAAGCCTACAGAAATAAAATTGGAAGAGACAGAGACTGAAAGACAAATACTTCATCAGAAGGAAGCGAATCAGGACGTTCAGTGTAATCGTTTCTTCCCCAGTAGAAAAACAAAGCCTGTGAAATGTATACTAAATGGAATAAACAACTCAACTAAAAAGAACTCCAACTGGACTAAAATTAAACTCTCAAAATTTAACTCTGTGCAGCAAAATAAATTAGACTCTCAATTTTCCCCTAAATCGGGCTTATTACGAACCAGTTTTTCACTACCTGCGTTAGAAACGCATCAGCAAGTGACGCAAAGTACATTTTTAGGGTCAAAACCATATGGTGATAAAAATAAAGCTTGCCAGCAGGAAGAAATGAAAGAAGTTAATTCTGAAGATGTTACACCTAATGATATTACAGTTGAAATGAATAAAATCCCCAAAAAGGCTCCTGAAAATTGTCATTTGGGTAATCAGATAAAACCACCTCCTGACCAACCATTGGATAAGCAGAAGAAAGATGCTTTTGAATCAACACCGGATAAGAATTGCAGCCTGTGTTTGGAATCTAAGCTTGAAAACAATCCAGTGGAAAATGCCACTACTGTCTCAACTCTGCTCAGTCAAGCAAAAATCGATACAGGAGAGAATAAATTTCCAGGTTCGATTCCCAAACAGCACAGTGTACTCTGTAATCAGACATCTAAGACGAGTGATAACAGGGAGATACCACCAAATCATTCTTGGCCCAAGTGTAATTCCCATTTGGAGATAACAATTCCAAAAGACTTGAAACTAAAAGAAGCAGAGAAAGCTGATGAAAAACAGTTGATCATAGATGCAGGACAAAAAAGATTTGGAGCAGTTTCCTGTAATGTTTGTGGCATGCTTTACACTGCTTCAAATCCAGAGGATGAAACACAGCATCTGCTCTTCCACAATCAGTTTATAAGTGCTGTAAAATACGTGGTTCTGCTCATTAATCACCACGAGTGTGGATCTGAAGAAGAGTTTATTACCTCTCTTTTTTTGAGGTTGGAAAAAAGAAAGAATTCTAGCTGAATATCCTGATGGCAGGATAATAATGGTTCTTCCTGAAGATCCAAAGTATGCCCTGAAAAAGGTTGACGAGATTAGAGAGATGGTTGATAATGATTTAGGTTTCCAGCAGGCTCCACTCATGTGCTATTCCAGAACAAAAACACTTCTGTTTATTTCTAATGACAAAAAGGTAGTTGGTTGTCTAATTGCAGAACATATCCAGTGGGGCTACAGAGTTATAGAAGAAAAACTTCCAGTTATCAGGTCAGAAGAAGAAAAGGTCAGATTTGAAAGGCAAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCTGCAATCTGTGGCATCAGCCGCATATGGGTGTTCAGCATGATGCGTCGGAAGAAGATCGCTTCTCGCATGATTGAATGCCTAAGGAGTAACTTTATATATGGCTCATACTTGAGTAAAGAGGAAATTGCTTTCTCAGACCCTACTCCTGATGGGAAACTGTTTGCAACCCAGTACTGTGGCACTGGTCAGTTTCTGGTGTATAATTTTATTAATGGACAAAATAGCACCTAAAATAAACTCATGCCTACAGCATCGGAAGACATCTACTGATGAGAATGGATTGGTTGTTGACTTAAACCAGGAACTAGGGCCATTTTTATTACAATGAACTCAGGACTGGCAACAACCAGAAGGTTGTTCCATTTTCATAAAATTGGAAAAAAAATGAAGTAATTGCTTATTGTTGTTTTGTTTTTTAAAGAAGATATTTTATTATCTTTTACAGAAATTTATGATTGATGTATTTTATCTATAGTTATTTAGACATGTTTACATGCAGCAGATAATTGTTCATAGTGGACTGAAAACTAATGCAAGGACTATGGTCTCAGTGATAAGTATAACTTGAAGTTCTTAATTGTGGCAATATACCAGTGTAGCTTGGTACTGTATTTTTTTTATATTGATCTGCTGATACCAGTTATAGTTTTAAAGATTGTATTTTCACAGAGTGGAAACCAATGTTTTTACATCATTATTCAAGAAGGGTGTGAGTTATGTGTTTAGGAATCAAAACTAATTCTTAAAGGGTCTGATACCTACTTTAAGGGAATCATCACAAAAAAAGCGAAGCTCCTTTAGCAAGAGAGAATTTGCAATACTGAGTTTGTTCTTCTATTTCTCTTTTTTGCTTCTTGCTGCCATCAAGAAGCAGAAGGTGGAAAAGAATTGAAGCTTTCCTTCTTGGAGAACTATGAATGACTCGAGTTAGAATGGTGCCCTGTAGTTTATTTATTTGTTCATTCTGGTTTCACTTTTTAAAATAAACATCAACTTGGCACACTTTGGCTATTCACAATCCCAAAGAGGTTTATAAAAACCTGTGGAATAGTTGCAAGCTAAATATGTATGAATTGGTATCTGCTTTGTTATTCCTCAGAAATACTGCACTGGGTATATGCCCTCATTATTGGACTTCATTTTGATACTTGTCTATCCTTCATAGTGCCCTCTACTTTTAAAGGGTTTATATGTTGAAAAACTGCTGTGGCCTTTTATGACCTGTATATAATGTAGAATAAAATAATAAAATACTTGATAGCTTTTTCTAAGTGATAAATGTGATAATGGTATGTTGTTACCGTGCTTTTTCAGGAAGTCTGTTAGGTTTGCTACCTTGAAATAAGATTAAAACAGTGGTTTTTGAAAAGGTAGTTTTCACTAGTTTGCTGCAGAATCTGTATGTCAGTAACATCTCCAAAAGATAGGATCCTAACATGGGAATTTTCTGGTCTTTCAGAGAAATAAAGAGCCATGGCCCAAGAATGAAACACCACTATGATTTAATATAGGTGAATGTTATGAGCTGACATTAAAACCAGCTAAGAATTAAGACTTTTAAATTAAGATCAACATATTGTGATATGTGATATATATCATTGTGATATATACACACACACACATTGTCACCCATAGATGTGTGCTTTTAAAATTAATTGAGTGGTGTAAGGCTCTGTACCTGTCAGTAGGGTGGAATGGTAAGGCAGTGTGACTGTTTCTTCTCATTCATCATGATGGTCCAACTCTTGACACTGCTTTTCTCTTTGGTCTTGAGACTCTTCTAGTCATCGCTGGTCTCAGTGTTTGCCTGACAGGGAACCCATGATTTTTTTTAAATAGGATGAAAACTTCAGGTGTAGCATAGATGTTCTAGTAACTGTTAAACTCATAACATAGGCCCAGATCCCATATAAGCAATAGGATGCTTTGGGGAGCCATACTCGGTGGGTTTCAAAGGGACTTGGAAGTAGGTTGTATTTATTGGTTGGTTTAAAGGTTACCATTACTAGGAAGATTGTTTCTTTTCATGTTTATATTAAAGACACAGCCCCTCAAATAAATTTTACATTCTAGCTATTTCTCCAAGAAGAGAATTATTAATAATATTTAACATTT EMBV3_31510 CAAGATTAATGTACAAGGAGAGGGTTTGGCATGGGGGAAGGGGAAACTAGGAGGTCAGAG Gene BVT0102_088859 + 0 NULL GK000018.2:39351835-39373791 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24527 GCCTAAATGGTGGCGGGCGAAGTGGCATGTTCTGTGCTATAGGCATTGTTGTTGAAATGG Gene GeneID:100336996|LOC100336996:XM_002690215:5_cdna Constitutive 0 NULL GeneID:100336996 9 GENE LOC100336996 NULL protein tyrosine phosphatase, receptor type, K-like EMBV3_34282 GAACACACAGACCAAGAGAACATACAGGTCGTAGCAGGCACCCTCTTCCAACAACTGAAG Gene BVT0102_410972 + 1 EMBV3_37899 GK000013.2:32187238-32347668 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00637 GAGAATTTAAGCTCATTGTTTTAATGAAAGAATGACATTTGTGCTCTGAATGTGCTCTAG Gene GeneID:506012|TEX12:NM_001034263:44_cdna Constitutive 2 NULL GeneID:506012 15 GENE TEX12 MGC127869 testis expressed 12 EMBV3_08229 TCAGGTGGACTCAATGGAAGGCCAGAGAAGTTACCAGATGTATGCTATTCATGGTGGGTG Gene GeneID:533276|RABGGTB:NM_001015646:59_cdna Constitutive 0 NULL GeneID:533276 3 GENE RABGGTB NULL Rab geranylgeranyltransferase, beta subunit EMBV3_38761 TGTTGAAAACCATATGCCTTACTATGTCCCTCTAATTCCTACCCATTCTAAGTGGAAGGG Gene GeneID:514644|PHACTR4:NM_001102007:161_cdna Constitutive 2 NULL GeneID:514644 2 GENE PHACTR4 MGC151764 phosphatase and actin regulator 4 EMBV3_18473 CAGAGGCCTTGCCCCAGGAAGCTCTGAATGAGATGGTGGCTAACCTGATGAAGTTCTTTC Gene GeneID:100298277|LOC100298277:XM_002699658:179_cdna Constitutive 0 NULL GeneID:100298277 X GENE LOC100298277 NULL similar to melanoma antigen family A, 9 EMBV3_00938 CAACTTGCCCCTTACTAGCCTATCGAAGCAAATGGAATATCTGGGCCGGTACATTGCCCG Gene GeneID:789629|LOC789629:XM_002692582:298_cdna Constitutive 0 NULL GeneID:789629 14 GENE LOC789629 NULL similar to hCG2036558 EMBV3_07266 AAAGTCATGGGCACCAAATTCTACCCACAATTTCCTCCTGTCCAACTTCCCTGACCCCCA Gene GeneID:286810|PTPRN:NM_001075131:38_cdna Constitutive 0 NULL GeneID:286810 2 GENE PTPRN MGC139418 protein tyrosine phosphatase, receptor type, N EMBV3_12197 GACGGCATCCCTGCGTCTGTGCAGGGACACGTGGCCGTCACCCTCTCCCCTGAGACCTGT Variant GeneID:615565|FIS1:NM_001034784:299_cdna 554^635 2 EMBV3_16694 GeneID:615565 25 GENE FIS1 MGC127603 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) EMBV3_22587 CCAGCCTGAAGACCTATGGGGTCATCCTGGAGAAGGAGTTTGAGAACCTGAACACAGTCA Gene GeneID:100298890|LOC100298890:XM_002688414:126_cdna Constitutive 0 NULL GeneID:100298890 6 GENE LOC100298890 NULL similar to high-mobility group 20A EMBV3_35540 AAGACCACCCATTTTGTAGAAGGTGGAGATGCTGGCAACAGGGAAGACCAGATCAACAGG Gene GeneID:514966|RPL7:NM_001014928:25_cdna Constitutive 0 NULL GeneID:514966 14 GENE RPL7 NULL ribosomal protein L7 EMBV3_27535 GCCTGGCTGTGTGCCAAGCCCTTCAAAGTCATCTGCATTTTCGTCTCCTTCCTCAGCTTT Gene GeneID:539535|NXPH4:XM_002687567:603_cdna Constitutive 0 NULL GeneID:539535 5 GENE NXPH4 NULL neurexophilin 4 EMBV3_37605 GCAGTATGACTTCTTCTCCCACCCCTTAAGAAAGTCAGAGCAGGAGGCCCCAACAGCCCT Variant GeneID:507710|TMEM92:NM_001083651:65_cdna 244^324 2 EMBV3_36014 GeneID:507710 19 GENE TMEM92 MGC148280 transmembrane protein 92 EMBV3_35040 AGTGTGTGTGCACGTCTGGCCATAGGCTCTCATATCTTTGGTCTTCTGACTGCTGCTATC Gene GeneID:509369|LOC509369:XM_002693787:82_cdna Constitutive 0 NULL GeneID:509369 15 GENE LOC509369 NULL similar to Olfactory receptor 5B3 (Olfactory receptor OR11-239) EMBV3_01040 TGTGTTGTAACTACTACGGCAACTCCTGTGGCTACGGCTGTGGAAAGACCTATAGCTGTG Gene GeneID:781858|LOC781858:XM_002684625:121_cdna Constitutive 0 NULL GeneID:781858 1 GENE LOC781858 NULL hypothetical LOC781858 EMBV3_33714 CTTACTACCTTTGGTAAAATGAACACCTACTACAAGCCAGGCACGGTTTCAGCACTGCAG Gene BVV0101_058359 + 0 NULL GK000024.2:43525530-43539720 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06883 TGATGTCGGACCTTTTCAACAAGCTGGCCATGAGGCGCAAAGGCATCTCCGGGAAAGGAC Gene GeneID:533602|WASH1:NM_001105406:40_cdna Constitutive 0 NULL GeneID:533602 5 GENE WASH1 NULL WAS protein family homolog 1 EMBV3_16490 GGTTTCTCTGCCAACCACTCATCTCCCTCCAATGATTCTGAAAGGACTGCAAATGCTGAC Gene GeneID:100336650|LOC100336650:XM_002699806:56_cdna Constitutive 0 NULL GeneID:100336650 X GENE LOC100336650 NULL misshapen-like kinase 1-like EMBV3_41785 CCATGGTCCAAGTGTGGTGGGACCCCCTACTAGGGTCAGGAAATGGACAGTAACATCTGT Gene GeneID:507475|C2orf17:XM_002685580:176_cdna Constitutive 0 NULL GeneID:507475 2 GENE C2orf17 NULL hypothetical protein LOC507475 EMBV3_17242 TGGCATGCGCAACACTCAAAGGTCCGGATTCCCACTATGGTACAAAAGGACTGAAGAAGG Gene GeneID:525916|BTBD1:NM_001098060:42_cdna Constitutive 0 NULL GeneID:525916 21 GENE BTBD1 MGC157166 BTB (POZ) domain containing 1 EMBV3_30695 CCATCGCCAACAGCTGCATGAACCCCATTCTGTACGTCTTCATGGGTCAGGACTTCAAGA Gene GeneID:615411|CMKLR1:NM_001145235:92_cdna Constitutive 0 NULL GeneID:615411 17 GENE CMKLR1 Cmklr-1 chemokine-like receptor 1 EMBV3_03672 TTTCCGAATTTGTATTTTAGTTGATTCAGGTACAGATGTACAAGTGACAAATGAGACTAA Gene GeneID:533642|PLOD2:NM_001101149:44_cdna Constitutive 2 NULL GeneID:533642 1 GENE PLOD2 NULL procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 EMBV3_11092 GAAACTGAGCCCTCTGAAACGGAGATGGCGAAAGCAGAGACCTCCAAACCAGAGCCATAT Gene GeneID:100301024|LOC100301024:XM_002699769:39_cdna Constitutive 0 NULL GeneID:100301024 X GENE LOC100301024 NULL similar to histone cluster 1, H2bd EMBV3_07927 CTGAAGATGGTGGTTTAGGTGATCAGGTCAGTTGCTGGCAGGGAGTCTGCAAAGGGATGT Gene BVV0102_088423 + 0 NULL GK000019.2:46643751-46648882 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04592 TCACGCAAGGATCATTCACGAATTCACACAGATCCGGCTTGGCTGAGATGCTCTTTCTGG Gene GeneID:615682|LOC615682:XM_002697793:386_cdna Constitutive 0 NULL GeneID:615682 24 GENE LOC615682 NULL similar to mCG66639 EMBV3_20350 CTGTGGATGTCTGTGACTTTTCATCCTCAGTATGTTCCCAAATCTGCTGGCATTGAACGG Gene GeneID:529318|MEX3C:XM_002697824:484_cdna Constitutive 0 NULL GeneID:529318 24 GENE MEX3C RKHD2 mex-3 homolog C (C. elegans) EMBV3_40673 AACTCTTAATTTTGTCTGAAACCATGCCGGGCTAGCTGAGGGGCGGGGATTGGGAGGATG Gene GeneID:520277|CALM3:NM_001046249:250_cdna Constitutive 2 NULL GeneID:520277 18 GENE CALM3 CALM1 MGC128137 MGC140648 calmodulin 3 (phosphorylase kinase, delta) EMBV3_14428 ATCAAGAAGGACTTGTGGAACACTGCAAGTTATCCCATAGCACGGACACCAAATCTGTGG Gene GeneID:513479|RNF114:NM_001024531:1027_cdna UTR3_Alt 3 NULL GeneID:513479 13 GENE RNF114 Znf313 ring finger protein 114 EMBV3_06339 TGCCTGGCCTGTATATTGGCAACTTCAAAGGGGGTTAAATACCTGTGCATTCCAGCAGCG Variant GeneID:787471|LOC787471:XM_002697612:109_cdna 48^130 1 EMBV3_37629 GeneID:787471 23 GENE LOC787471 NULL similar to dual specificity phosphatase 22 (predicted) EMBV3_25722 TGACCCTGGTGGTCACGCTGGTGCTAGTCATTCTCTCCTACACGTCCATTATCAGGACTA Gene GeneID:515967|LOC515967:XM_002687427:182_cdna Constitutive 0 NULL GeneID:515967 5 GENE LOC515967 NULL similar to olfactory receptor Olr878 EMBV3_35678 TCTGGCCCCCGCGAAGGAGCACGGGGCTTGGAAGAGGTTGCTGCCTTCTTCGTGGCCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06788 CAGGCTTATCGCAAGGATGATTTCGTTATGTGTTCGGAAGAATCCTCAAACCAAGAAAAT Variant GeneID:617430|C2H11orf70:NM_001046598:26_cdna 206^621 3 EMBV3_35648 GeneID:617430 15 GENE C2H11orf70 C11orf70 MGC127886 chromosome 11 open reading frame 70 ortholog EMBV3_02178 TACTGCACCGGCCAGGCTGGATTTAAAACTTTTTTTACAGGCTGGTGGATTATCATAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03015 GCCATGGCCAGCAGGCACTCTGCTAGGTGAGATAAAAATTGTTACCAATGCACTTGAAGG Gene BVV0102_148138 + 0 NULL GK000005.2:100849815-100927080 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196067 1 XLOC_118221 NonCoding TCONS_00196067 XLOC_118221 NonCoding NonCoding LOC100294723 5:100669036-100898305 o TSS145968 266 2 0.99884850916831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000865134398791632 0 0 0 0 0 0 0 0 0 0 XR_231205.1 LOC101906119 PREDICTED: Bos taurus uncharacterized LOC101906119 (LOC101906119), 1e-119 432 100.00 0.894736842105263 0 noncoding 0 0 0 0 -0.0469521921403373 0.695327238126747 -0.0171794267375337 0.724724852624689 CTTTTCAAGGTAATTAGAGGAACAGTAAAGATTCAGAGAAGTGAATAAACATTTTGAGGTTCACTCTTCTCCTAGCAGTATCTTGGTGAAGGATCACCTGCTCAGAATCTGAACAGGGCCATGGCCAGCAGGCACTCTGCTAGGTGAGATAAAAATTGTTACCAATGCACTTGAAGGACCAAAATCCTGAAGTGAAAAGTGGGTCAAAGGAAGCTTGATGTTTTTCCTTTAAGCCATTTTTCTTGTTAGCCTCTTTCCCTGTGAAG TCONS_00196068 s 3' 1436 TCONS_00196068 s 3' 1436 EMBV3_05374 CCAAACCGAACACTTGTCAGGTAGCTGCTCGTAGCACACATGCAACTAGGAAGCTGGTCA Gene GeneID:525199|GZF1:XM_002692163:60_cdna Constitutive 2 NULL GeneID:525199 13 GENE GZF1 NULL GDNF-inducible zinc finger protein 1 EMBV3_41754 ATCAGGGATTTGCCTAGCTTGGGTTATGCTTGCTGGAAAGGGGGTTTGAGAGGGGCCAAT Gene BVV0102_020290 + 0 NULL GK000019.2:5516686-5642997 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092056 TCONS_00092058 TCONS_00092047 TCONS_00092055 TCONS_00092048 TCONS_00092050 TCONS_00092049 1 XLOC_056800 Coding TCONS_00092048 XLOC_056800 Coding Coding STXBP4 19:5290304-5522464 j TSS69386 7776 1 TCONS_00092048_1 556 0.0936213991769547 18 0.966583246826528 0.000213605607881121 0.000474252184486771 0.000252695967080193 8.65820303134333e-10 0.00016117264582237 1.85389103091022e-08 1.25612679974472e-38 0.00036915286341206 4.23738093827931e-09 6.28633767444433e-06 4.12220240309959e-06 5.74440519887487e-14 7.52370891215763e-05 8.16494913051632e-14 0.000197380215416489 0.000160694549686525 4.51673322885232e-07 0.00022087340483654 3.91060044276813e-18 0.000258863832178101 0.000116710428090961 0.000167918669289249 0.000390230756231526 0.000277733059077279 2.4456356618319e-06 2.62891530742522e-19 0.000343244313682635 3.65501573885314e-32 3.83008196004268e-05 4.22996750973252e-07 NM_001192927.1 STXBP4 Bos taurus syntaxin binding protein 4 (STXBP4), mRNA. 0.0 3048 98.74 0.222608024691358 NM_178509.5 STXBP4 Homo sapiens syntaxin binding protein 4 (STXBP4), mRNA. 0.0 2681 83.08 0.329732510288066 TCONS_00092048_1 sp|Q6ZWJ1|STXB4_HUMAN STXB4_HUMAN Syntaxin-binding protein 4; 0.0 917 81.96 0.996402877697842 2 coding 0 0 0 0 0.226085774546296 0.203346220654987 -0.0671906786165595 0.175996321843491 CTCGCGAGGCCTCCTCGGTCTCGCGAGCTCTGGGTTGAGCCCGCCGCTGCCTAGGCTACGGCTCTCAGGTAGCCGCTTTTGCGGTCGGGCTACGGAGGCCCGGTGGCCGGGAAAGCATTTAAGAAGCTCTTGGAGTAATATGAGTCAGAGTAATGTCTGCAGGAAGTCCCTCAAGATAGTTAGGAAAAAGAAGAATTTATAGACTCTTCATCAAGATCTTCATTTACGCAGCTGTTAAATCCAAGGCTACAGTTGTGGTGAAACCATGAATAAAAATACATCTTCTGTAGTATCATCCAGTCTACTTGAAAAGGATCCTGCCTTTCAGATGATTACAGTTACCAAGAAAACAGGCCTTGGTCTGAAGATCCTAGGAGGAATTAACCGGAATGAAGGTCCATTGGTATATATTCAGGAAATCATTCCTGGAGGAGACTGTTATAAGGATGGACGTTTGAAACCAGGAGATCAACTTGTCTCAGTAAACAAGGAGTCCATGATTGGTGTATCATTTGAAGAAGCAAAAGGCATAATTACCAGAGCCAAGTTGAGGTCAGAATCTTCTTGGGAGATAGCATTCATAAGACAGAAATCTGACAGCAGCCATTTAGAAAATCCATCTTGTTCATCCCTTTTAGAAGCTACAGGAGAATATGGACCTCATGCCTCAAAATTTAGCCTTATTTCTTCTCCTGAAACACTAATTCCAAAGACCTCATCCACTCCCAGATCTACAGACGCCATTTTACCTTCTTTGAGGAGGAATCAGATAAAAACTGGATACAAGAAAACAGAACAGATTCCAATTACTTCTTCAGACAACAGCCCTACAGATATGTCTAATACAGGTTGGACTGATAACTATGGGCCACAAGGAAAGAAGATTTCCCTAAATCCGTCTGTCCGCGTTAAGGTGGAGAAACTGGAAATGGCTCTAAATTATCTTGGAATTCAGCCCACAAAAGAACAACACCAAGCCCTGAGACAACAAGTACAAGTAGACACAAAGGGGACGGTGTCTTTTGGAGATTTTGTCCACGTTGCCAGAAACTTGTTTTGCTTGCAATTGGATGAAGCCAACGTTGGTGCACATGAAATTTCCAGCATATTAAATTCACAGATTTCTCAGGAGGCAGGTGATTCCTTAGAAACAGATGAAGTGGAAAAGCTTAAGCATGAAAGAAATAACGCCTTGGAAGAAGTGAAGACACTTAAGGAAAAATTGTTTGAATCGGAAAGGCAGAGGAAGCAATTGACAGAAGAACTCCAGAATGTGAAACAAGAAGCCAAAGCTGTGGTCGAAGAAACAAGAGCCCTGCGAAGTCGGCTTCATCTTGCCGAAGCTGCGCAGAGACAGGCACAGGGAATGGAAATGGATTACGAGGAAGTGATCCGTCTGTTAGAGGCTGAGATTACAGAGCTGAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGAGTTAAGAAAGAGAATCACAGTACTGGACTGCCAATTGCGAAAATCAGAAATGGCGCGGAAAACTTTTGAGGCATCCACTGAAAAGCTTCTCCATTTTGTAGAGGCTATTCAAGATGTATTTTCTGATAATTCTGCACCTTTGTCAAATTTAAGTGAAAGAAGAGCTCTGTTAGCTTCCCAGACGTCCCTCACGCCATTGGGAAAGAACGGACACAACATCCCAGCAACACTGGCACTCGAGTCTAAGGAACTTGTTAAATCTGTCCGTGCCATACTTGATATGGATTGTCTACCTTACGGGTGGGAGGCAGCTTACACAGCAGATGGAATCAAGTACTTCATCAACCACGTAACACAGACTACGTCCTGGGTGCACCCCGTGATGAGCGCGCTGAACCTGTCCTGCTCAGAGGAGGATGAAGAGGATGGTTCCCGAGAACCTCCCGACCAGAGGAACTCATGATTTCCTGTGGGAAGCTGCACTCCGTGGTCTTCCAGCGGCTCCATCTACGGAGATAACTCTGAGACACAACATCTAAACGAGGAGTAAAACACACACTGGTTAGTGAGGCTGTGAAATGGAGACTCTGGATTTAAGCTGTTTTTGTAAAACTTTTGGATATAACTGTATACATTTGCAAAATTGATTGCCACTATAGTAGTTCTTTAAGAATAATCTAGTCCTATTTTTTAATCATATGTAATTAGATTTCATAATATGTATAATTTTTCATATGTAATTAGATCTTTGTAATTTTACATTTAGTTCTTTATGGAATATCAGACAGTGGTTTTTATAATTAAGACTTTGAAAAATTATGTGAACATAGTGAAACACTTCATTTATTTGATAATTCACTAATCTTTTATACGCATATCATAGGAAGGTGATTTAAGCAAGCTTTGGGGAGTTCTTATGGATCACATTTAGACAACTATCTCACAAGCCACTGGATACAGCTTATATCTTGAGGATGCTTTCTAATTTACAAAATGCTTTTCAGACCCTGTCTTATGTAAAGCATACAATGTGCCTGTGAGGCAGCTCCAGTGGGTATTTTATAATTAGGAAAATAGCGTTCAGAGAATCGAAGCCCCTCTCCTGGAGCTGAGGCTCACACCATTGTCTTCCAGTTCCACACCCAGGCCCCTTCGCCCGACACACAGGGCCGTGGGGCTCTGTTGATACAGCTGAACTTCACCGCTGTGCACCCCAGGAGCCACAGAGACTCAGGGGACACGTCTGCATTTAAACGTGGCTCCCAACCGGTCCACGCTTCTTTATAAGCCCTTCCCCAACACACTCAACTGGCAGAGGCAGGGCTTTGTGATGCTGTTACAAATGGCTTCTTTTCAACAGCTCACATTTTTCTAAAGTAAAGTGACTGGCTCCCATCAGGGATTTGCCCAGCTTGGGTTATGCTTGCTGGAAAGGGGGTTTGAGAGGGGCCAATGAACAGAGAATAGAGGGGCATCCAGAATCTGTGTCGAAAGAGACATCCATCGGCCTCCAGACTGATTATGCTTTTGATCTCATTTTCATTTTATTGTAAGGAGAGTTTCTGGAAGGAATGAGCCATTGACTTGCAGTGCTAAAGATTTTCTCTCCGTTTAATGATTTAAAGCTGGAGCTGGGAAATGAGGATGGGGGAAGGAATGGAGTTGGGAGGAAGTCATTTTAAATGCTCTGGGCATTGAGTACCAACTGAATAATAAAAAGGGGCTTATCCTTACCCAACATTGTTAATATTGTTAGGTAATATACTTAGGAGGAAAGTCAGCAAGAATTATTAAACATCTTTTGGTGAAAAAGACTCATTTTGCAAATGAGTTCTTATGTAGAATCTCAATACTTGTAATGGATTTTTTTTTTTTAAATATTACTGTCTTACTTAAAAGATAGAGGCTTGGAGCTCAATTAAAACAGCAAACCTAAAACTCCTTAGGATATACACTGGCAGAATTATCGATTATAACCATTTTGTAAATGAGTAAACTGAGATCTTAAGAGTTCACATAGTAAATCAAACTTAGAACTAGATCCTGAGTCTCCAAGTCTGCTACCCTTCATGTGGTATGTTATATAGACCTATGCTCTAAATACATGTGTACATTATACTCACACATCCCTGAATGTATGTAGGGTTTATAATTCTGTCTTGAATGATAACATAAGTCAAATCCAGGGTGATAGGTAGTCATTAGCCCTGAGAAAAGTTTCAGAAGGGCTGCAGAAGACCTGAGTTTCCCCTGACAGCTCTTTGAATATTGGGAAGCTGCAGGGAGACACGTTTTGAGAGAAGGCCCCGAGGGAGCTCTTTCCTTACATCCCCTAGAGATGAGTGAGGTTCTCAAACACCCCAAGTTACTTTTATACGTTAGTATCTATAATCATGAAAGTACACAGTATTTGTTGTTGCCGAATTAATGGTACAAAATGTCCCTCCCCTTCCTGGGAGTGTTTTTCTAATTAGTTTCCAGTGAGGAAAACACAGGAGACGCTCGAATCACTTGGCATCAAGGTTCTCAGGGCACATTTCACTGGCGGAGGCCTCATACATTGACTTTGCTGTTTGGTGGCACTTTCCTCACTGACTCCTAATTGAACACCTAATGGAAAAGGCCTATGAAAATTGTAATATCAGGGACTTCCCTGGCAGTCCAGTGGTTAAGACTCTGAGCTCCCACTGCAGAGGGCACAGGTTTGATCCCTGGTCAGGGAACTAAGATCCCACATGGCACACAGGACACAGCCAAAAAATAAATAATATCTAAAAATAAAATTGAGTATTACTTATTGAACTTATTGTGCCATATGTTTGTGATGGCAATTTGCATATATTATTTCATTATCTTCTTAAAACAGCCCCATGAGGTAGAAATTATCTATGATCATCCCCATTTTGTAAAGAAGTTTACAGTTAGAGAGAATTGCTAGTCTTTGCATCAGGGTCCACACAGCACCCAAGAGTGGAAGCTGGGTCAGAAGGCAGGTTTCCCAGGGCTGTTCTGGTAAACCACTGCACCACTTAGAGCCATTGTATGTGACACTGGAGGGCAGAGCTGGGATCCATGGGTCAGTTTTACGAAGAAACAGATTCTAGCTCCGTTCGATAAGGAGCTTTCTGGTAGTTAGGATGCATCAGGACAGAATTCCCCAGGAGAAAATGGAAGCTATGTCCCAGGAAGAGTTCCATCAGTCTAACTCCTTATTATGAGACCATTGCCGAGGAGGCTCAGGGTTCTCTGCCTGGACCACCTGAGCACTGTCTGAGATCTCTTCCTCCGTATGCCTCTCTGACCTCTAAACCAACAGATAAATGCCCCAAGAGACGCTCAAAGAAACATATGGCAGGGACTCATTAAGAATCCTTATTCAACACAGGAAGAGCCCCACAGTTAATTTGGAATGAGTCGACATTTATATAGTCCATCTTTCAAATTCTTCTCCTTTGACTGACTGACTCAGATTTTAGGATTAAAAAAGCTCAGTGTTCTTCTGTGCTTCCACCTCACTTTACTAAAGAGTGAGCTGGCTTATTGACCAAGCATCACCACCATGCCAAGCAGGGTGCTAGGCACTGGGGTGCAGTAGGGCAATGGCCAACCACTTCCTGGGGTCTACTTACTGCTGCTTAAAACGTGGAAAGCTTGTCGGGTAGTCAGAATTGAATAGCTTTTCTTTCATTTTGATTTTTAAAGTAATCTATTTCCATTTTTAAAAAATGAAGTAGTAGGGATTTGAATGAAGTTAAAAAAAAATCTCACTTTCTCCAGGGAGCCATCACTGATACTTCGATGGGTATTTTTACTGAAAGGAAGTTATACTGTTACGTATCTTTGAATTAATATATTGTAGTTATTTTCACAGTGATACACAGATTAATGTTATATTTCAAATGTCTCTATAAAATATCACTACCCAGATAACTCCTAATTTCTGTAGCCAACAATCTATTGATGAACTCTTAGGTTAATTTAAGTCATATTCTGATATTGTACTGATCTAGATAATATAATTGCTCTTAATTTTATCATTTCAAGACATTAGAGACATCAGAGTTTATTAAAAGGTCATATGTACTATAAAATACAATCTACTCTGTCCATGAACCACCCCCCCTCCTTTCCTCTGAGCCAGGTTAAAAATTTCCTTTATGCTCCATTTTTAAAAATTTTTTAATTTTATTGAAGTATAGTCGATTTTCCTTTATGATCCTTATTGTCCTTGTGTTTGACTTTATGCTAGTGTTTATCATGTTGTACAGGATTTATTTATTGTTCTCATTTGATAGTTTGTGAGTTCTTGGGAGGGGCTGTTTTTTATTCTCCCTGTCCTTAGAATTTATGCATGTGTTATGTCCTCCATGATTCTTTTTTTCTCCAGTTTTATTGAAATCTAATTGACATACAATACATATAAGTGTTTAAAAAAAGTCTTTTGTTACTAACAATGTCCCAGTGAACATTCTCACGTTCATTAAATCCTTTTCCTCATATATCTATGCACTCTTGTGCCAGTATGTCTATAGCGAGAATACATCCTTAAAAGTAAATTGCAGACTTCCCTGGTGGTCCAGTGGTTAGGAATCTGCCAATGCAGGGGACGGGAGTTCAATCCCAGGTCCGAGAAGATTCCGCATGGCTCGGGGCCACTAAGCCTGCACACCGCCTTTATTGAGCCCATGCTCCCCAGCAAGAGAAACCACCGCAGTGAGAAGCCCCACACCGCAGCGAAGTGTGGCCCCCACTTGCTGCAACTAGAGAGACCGTGTGCAGCAACAGAGACCCAGCACAGCCAAAAATTAAAATGAATTAATTTTAAAAAGTAAATCACTACATCAAGGTCGTGATGTAGCAAATCAGCAATCACTTTAATTTTGATAAATATTCACAAATTTTCCTGTGTAAAAATAGGACTGCCAGCACTAATGTGTGAGAGCTTTTCTTCTATGTGTTATAGGACACTTTTTTTAGTCCAAAGATTGCCAATACCATTTCTGATTGTTTTTGTCCTTAGAAGAGTGATCTTCTTTCCATCATTGTTTAAGGACCAGAATTTCTCCATCATTGGGTTTTAGCTGCCCTTGGCAGCAGAGGCTGACTCGCTTTATGTGGGGGGAGTCTAGCAGTGGCCAATTCACTGTGTGTCAAGCACATCATTACGGTCATCTTTTTACTTGCAAGTATTGGCCTTTCCTACTTTACATATAATGATGGTGAGGACCAACTTTTAAATGAGCTAACTTGGGTGAGAGGCCTTGGTAAAGTGCAAAGCACAATACAAACGCACTTTGAGCCCTGGTTTCCCTGTCTGTGAGGGGATAGTCATCCTCTGACAGTCCGGAAACCATTCAACTCAATAGCCACTTCCTGAGCACCTGCGAGACGCCAGACAAGACGCAAGGGCTTGAAGACCCCACACTGGATAGTTCTGATTCCCAAATCAAGAAGCTCATAGTCTGAAACCTTTTCCCTTTCCTTCCTTTTTTCTCAGAAACATTTTACTTTTCCTTAAAGGAGTAAGAACTTAGGGATCTGGTTAGTAAGAACCCCTGAAGAGAGGCCCTTTATCACTCTCTTAAATTTGAATGATTCCAAAATAATATTCCAAAATAATAACACCCCTTGACTAGAAATGAAAGGATCATACTGTATGAAGGGCCTCTCCAATAATAAATGCTAAGCAGCTGTAAAAATAAGGAGTCAAATGATACTTTTCATAAATTGTTTTCAAAATTAGAAAATATTATCCTTTTTCTGGGGTAAATGGACATTTTATTTTCTCTGCTAAGTAAAATACAACTCTTTCAAAAGTGAACACACTTGAATTTTACAATATACAGAACAAAAAGAACTAAACTAACACAAAAACAACTTACATAGCATGTAAATTTTGAGAGGATGAAAAGAACTTTGAATAGAATACACCCATGAAAATTAACTTTAGACGTAAAATCCCAAGATGTTTTAACCACAGCTAACCACATATAATATCATTGGACCTACATGATGGTTATGTAAATATTAAATGCAATTCTGTATTTGCTTTCTTCATGTGACTTCTTACATTTAACTAATACTTCTTTTGTTAATTTTGTTTCAATTTCACTCTCAGGGTACCGGGGTGGTCTGAGGGACAGTGCAGTCAGATTAATAGCTCTGAGCCCTCCTCATTCCTGCTCCCCCATCACCAAAATAGTCTCTGGCATTTTACCCTGTTCATTTCTTTTACATTATGTATCAATTTGTAATGACGTATTTGTTGATTATCTTTCTTAATAAAGAGAATAAGAATGAGAG EMBV3_24969 CAGTCACGTGATCACTGCATGGTCAGTCATGTGATCAGTGCATGATCAGTCACGTGATCA Gene BVV0102_167466 + 0 NULL GK000008.2:72045-146565 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232654 1 XLOC_142139 NonCoding TCONS_00232654 XLOC_142139 NonCoding NonCoding - 8:74534880-74535670 - TSS174158 790 1 0 1.32479967357359e-06 0 1.67341715826177e-06 0 1.56239122393719e-06 3.77326755355424e-06 0 1.06956887209741e-06 0.000199241825479836 7.44031186205153e-07 0 0 4.03554924596879e-06 1.78632335226826e-05 1.7448181053181e-05 6.68650851961336e-05 0 0 0 4.60572974872307e-05 1.78684991917617e-05 9.39325587227536e-06 0 2.12210630795652e-05 0 1.71288325938222e-05 0 0 0 0 0 noncoding CGTGAACAGTGCATGATCAGTCACGTGATCCGTGCAAGATCAGCCACGTGATCAGTGCATGATCAGTCACGTGACCAGTATATGGTAGCTACGTGATCATTGCATGATCAGCCATGTGATCTGTGCATGATAGCCACGTGATCACTGCATGATAGCCATGTGATCAGTGCATGATCAGCCACGTGATCAGTGCATGTCGAGGCACGTGATCAGTATGACCAGCCTAGTGATCAGTGCATGATAGCCACGTGATCAGTGCGTGATCAGTCACGTGATCAGTGCATGATCAGTCACGTGATCATTGTATGATCAGCCATGTGATCAGTGCATGATCAGCCACATGACCAGTGCATGATCAGCCACGTGATCAGTTCATAATCAGTCACGTGATCAGTGCATGGTCAGTCACGTGACAGGTGTGTGGTAAGCCACGTGAACAGTGCATGTTCAGCCACGTGATCAGTGCATGATATCCACGTGATCAGTGCATGATCAGTTACGTGAACAGTGTATGATCAGCCACGTGAGCAGTGCATGGTCAGACAGGTGAACAATGTATGATCAAACACGTGATCAGTGCATGATATCCACGTGATCAGTGCATGATGAGTCTCATGAACAGTGCATGATCAGTCACGTGATCAGTGCATGATCAGCCACGTGATCAGTGCATGATCAGTCACGTGACCAGTATATGGTAGCTACGTGATCATTGCATGATCAGCCATGTGATCTGTGCATGATAGCCACGTGATCACTGCATGATAGCCACGTGATCAGTGCATGGTCA TCONS_00228133 . 5' 110144 TCONS_00228133 . 5' 110144 EMBV3_14546 AGAAGGAAGCTCAACTGTATCGCAATGAAGTAAGACACATCTTCACGGCTTTTGACAGGC Gene GeneID:617365|LOC617365:XM_002691111:31_cdna Constitutive 0 NULL GeneID:617365 10 GENE LOC617365 NULL similar to CG11638 CG11638-PA EMBV3_37210 TTCGCAGCGCAAGAAGTGAAGACAAAAAGCCAGGTTCACGAGAAAGCGCACTCGCTGGTC Gene BVV0102_145778 + 0 NULL GK000014.2:31720449-31735267 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053122 TCONS_00051626 2 XLOC_031657 XLOC_031249 Coding TCONS_00053122 XLOC_031657 NonCoding NonCoding - 14:31725081-31735119 - TSS39258 1350 3 TCONS_00053122_1 76 0.454814814814815 3 0.865796552754807 0.00204134896437864 0.00193835339672346 0.00162383619028847 0.00146834888018016 0.00303321538259971 0.000156434363513416 0.00100921880923466 0.000941973025444848 3.15490646304785e-75 0 0 0 2.63001393479615e-26 0 0 0.0015064376804294 0 0.00223030238436478 0.00154721229968976 0.00159265594684148 0.000483877702649546 0 6.79559508867639e-05 0.000301278809900101 0.000777358355176211 0.00467052352844183 0.000245821068176889 1.23648149856619e-19 0 0 XM_005223069.1 CCR9 PREDICTED: Bos taurus chemokine (C-C motif) receptor 9 (CCR9), 7e-49 199 85.88 0.125185185185185 0 noncoding 0 0 0 0 GGACGGCCGTTCTCAGTGTGCGCACGCGCGGGGCTCGACCAGCGAGTGCGCTTTCTCGTGAACCTGGCTTTTTGTCTTCACTTCTTGCGCTGCGAAGTGCTTTGTAAACTTCAAGCTCTAGCTATTGATTATCACTGCCTGGATCCGTGATGTCATTATAGTTTGCAAAAGGGTGATGACTGCTTCCCACATGGCTCAGTGGTAAAGAATCCACCTGTAATATAGGAGCCTAGGAGCCATGGGTTTGATTCCCGGGTCGTGAAGATCACCTGGAGAAGAAAATGTCAACTCACTGCAGTATTCTTGCCTGGGAAATCCGGTGGACAGAAAAGCCTGACAGTATTCAAGTACTCCTGGGACTTCTCAGGTGGTACAGTGGCTTACTCTGTGCTTCCAGTGCTGGGGACGTGGATTTGATCCTTGATCCAATGGGGAATCTGCATGCCACAGGCCATAGCCAAAACAAAACAAAAACAACAAACCAACCTCCCCCTCAAAACAAGCACTCCTGAATTTTTTGACCATAAATTAGCTTTTATTAGATCTTTTCTATATAGTATATTTTTTAAGAGAGACATGGGACTAAATGTACGTTTATGGAATGTCTTCTAGATACTGGTCTAGATGCACTGATGCATTCACTTACACTATTTTATCTGATTACAATAGCAATTTTGGAAAGCAGGTGCCATGACCTCTGTTTTTTAGAAGAGACTGAGGCTCTCAGCAGCAAGGTGAGGAGTACAAAATCATACAGCCAGCAAGTGGTCAAACTCAGATTTGTCTGAACCACTTAGCATCCTGTAGCTTTTTTGAATGAGGTTGTACAGACACTGAGCCACTCAGTGGGGCTCACTGGTTGCCCCACCAGCCTCCAGCCTCTTATATGTCCTCAGAGAGTTTGGTGACCTCCAGTTTGTTGCTCTCATACTTAAGAAAGTAGTTCCTTGGAACTGCTAAATACCCCTGTGCCTTTTAACCTAAAACATATACATTTTTTTTCTAGGAACTTAAACTGATTTTTAGTTTTTAAAAATTTTTATTGGAGTATAGTTGATTTACAATGTTGTATTATGTTCACATGTGCAGTCCAACACATAGATTTTTCTTTGTGGTTGTTCAGTTGCTCGGTGGTGTCTGACTCTTTACGACCCCAAGGACTGCAGCATGCCAGGCTTCCCTGTCCTTCACCATCTCCTGAAGTTTGCTCAAACTCATGTCCATTGAGTTGGTGATGCCATTCAACCATCTCATGCTCTTTTGCTCCCTTCTCCTCCACTTTATTACAATATGATTTTACTTACTGCAAATTTGTCACGTTATATATAAAACTATACTTAACACCTGCCC TCONS_00053118 TCONS_00053119 s 5' 4280 TCONS_00051626 r 5' 0 EMBV3_26421 ATCGTGATGGTTCGTCTCCTTCTTATCCCGTCGGTCTCTGAGGATGGAGATAGCTCAGAA Gene GeneID:781978|LOC781978:XM_002685400:19_cdna Constitutive 0 NULL GeneID:781978 2 GENE LOC781978 NULL similar to Breast cancer metastasis-suppressor 1-like protein (BRMS1-homolog protein p40) (BRMS1-like protein p40) EMBV3_07579 CCGTCACTCGAGCCTCTGCCCCAGCGTTATTTTTGTAATAGATCATGAGCTCAAGAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29668 CTGATAATCCAGATAGTTCTTGACACTCTGAACAACCTCAAGTACAGCCGTTCAAGCCAG Gene BVV0102_169046 + 0 NULL GK000002.2:89899549-89920584 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102863 TCONS_00102869 TCONS_00102864 TCONS_00102867 TCONS_00102868 TCONS_00102870 TCONS_00102865 TCONS_00102866 TCONS_00102862 1 XLOC_061967 Coding TCONS_00102862 XLOC_061967 Coding Coding BZW1 2:89864990-89901613 = TSS76508 5824 1 TCONS_00102862_2 419 0.0199175824175824 15 0.841379498662006 0.00158232892438505 0.00124362191795489 0.000870311457788163 0.000964829978196923 0.000930566038700308 0.000492988030073877 0.00111450439400006 0.00123907169947385 0.00267262169300792 0.00349281126776524 0.0019520494195158 0.0016090082279476 0.00119568797453955 0.00334500727377678 0.00167276743563894 0.0193512212079166 0.0118246933964484 0.018453402660727 0.00121534264222636 0.000959545113899416 0.000284630451222226 0.0101320047352284 0.00796387129615514 0.0132566284485504 0.000912309290870928 0.000722957631767271 0.00117926835701832 0.00356574255672285 0.00272417761442418 0.00438881027658324 NM_001206613.1 BZW1 Bos taurus basic leucine zipper and W2 domains 1 (BZW1), mRNA. 0.0 1.042e+04 99.98 0.992616758241758 NM_001207067.1 BZW1 Homo sapiens basic leucine zipper and W2 domains 1 (BZW1), 0.0 3900 89.17 0.511675824175824 TCONS_00102862_2 sp|Q7L1Q6|BZW1_HUMAN BZW1_HUMAN Basic leucine zipper and W2 domain-containing protein 1; 0.0 860 100.00 0.997613365155131 1 coding 0 0 0 0 2.13757364641523 0.0365511577822334 0.178544947990083 0.00883307996059856 GGGGCGGGGGGGGCACCTCTTTTCTCCATAGTTCCTCCTCCTACACCGCCGCAGTTGCTGCCACCTCCGGGGTTTCTGGCTCTTTTCTCATCGCCTTAAATTCGGGTGTCTTTTATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCAGCGTTTTAAAACCAGAAAAAGAGATGAAAAAGAGAGGTTTGACCCTACTCAGTTTCAAGACTGCATTATTCAAGGCTTAACTGAAACTGGTACTGATTTGGAAGCAGTAGCAAAGTTTCTTGATGCTTCTGGAGCAAAACTTGATTACCGACGATATGCAGAAACACTCTTTGACATCCTGGTGGCTGGCGGAATGCTGGCCCCAGGTGGTACACTGGCAGATGACATGATGCGTACAGATGTCTGTGTGTTTGCAGCACAAGAAGACCTAGAGACCATGCAAGCATTTGCTCAGGTTTTTAACAAGTTAATCAGGCGCTACAAATACCTGGAGAAAGGTTTTGAAGATGAAGTTAAAAAGCTGCTGCTGTTCTTAAAGGGTTTTTCAGAGTCGGAAAGGAACAAGCTGGCTATGTTGACTGGTGTTCTTCTGGCTAATGGAACACTTAATGCATCCATTCTTAATAGCCTTTACAATGAGAATTTGGTTAAAGAAGGGGTTTCAGCAGCTTTTGCTGTAAAGCTCTTTAAATCATGGATAAATGAAAAAGATATCAATGCAGTAGCTGCAAGTCTTCGGAAAGTGAGCATGGATAACAGACTGATGGAACTTTTTCCTGCCAATAAACAAAGCGTTGAACACTTCACAAAGTATTTTACTGAGGCAGGCTTGAAAGAGCTTTCAGAATATGTTCGGAATCAGCAAACCATAGGAGCTCGTAAGGAACTCCAGAAAGAACTTCAAGAACAGATGTCCCGTGGTGATCCATTTAAGGATATAATTTTGTATGTCAAGGAAGAAATGAAAAAAAACAACATCCCAGAACCCGTTGTCATTGGAATAGTGTGGTCCAGCGTAATGAGCACTGTGGAATGGAACAAAAAAGAGGAGCTTGTAGCAGAGCAAGCCATCAAGCACTTGAAGCAATACAGCCCTCTACTTGCTGCCTTTACAACTCAAGGTCAGTCTGAGCTGACTCTGTTACTGAAGATTCAGGAGTACTGCTATGACAACATTCATTTCATGAAAGCCTTCCAGAAAATAGTGGTGCTTTTTTATAAAGCTGAAGTTCTGAGTGAAGAACCCATTCTAAAATGGTATAAAGATGCACACGTTGCCAAGGGGAAGAGTGTCTTCCTTGAGCAAATGAAAAAGTTTGTAGAGTGGCTCAAAAATGCTGAAGAAGAATCTGAGTCTGAAGCTGAAGAAGGTGACTGAATTTTGAAACTACACCCTCAGTAAAGCAAACAGGAGTTGTAGATAAAATGTCATGTCTCATGTGTCCTGGTTCTTACATCTTCCTACCTCCCTATATCAAGCATGATATAAGGGCTTTCATGGCAAATTTTATTTTAACTGTTTCTATGGTTACTGGAAATGTTGGATTTAGTTTCTAAAACCATGTTTTAAGTAGCTGCAGGAGCTATAGATTTGAATCTGATGTTGCATTAGTCTTTTCAGTTATCTTCTACCTCCTGTATTTTCTACTGTAATAATGTAATTTAAGGCCTTCCACAATGAACAGTTCACTTTATTCCCTGGGTTTTCTATATAAACAGTTTTCAAGATATGATTTGGTTAAAAATAATTTGTTATAAAAATTCTGTTTGCAAATTAAACTGTAAAAGTATCCAATGTCTCAGAAGGCAATGATTTGTGTGATAATTTGATATGCCCAAAGCCCTGCTCATCAATGAAAACTATCATATACAGTAATTGAATTCATTAACATGAATCTTGAGTATCTGGACCATTGCTTCCATGTTAACATTTTCTTGGCATTTTTAGCCCCAGATGTACTTGAGCTCAATTGTCTGCTCTCTGATTTTCATTCCCTAAAATGAAGCCATGGAGAACAAACTTGAAAGTGGGGTATTTGGGAAATTGTATGTGGCAAAGGTAGTGGGAAGAGAAAAATTAAGCTTTTCCCCATTGAGAAACTTCTGCATTCAGTTTGTTTCTTTCCACACAAAACAAATGAATATTCTTTTCACAAAGCCATTTTCAAATATACCTTGGAAAAAGCCTTGTCATTTAAAGTATTTTACACTTACCCTGCACTTAGATTCATGAGAGAGGACTGAAAATAGTGCGAGTAAAGCAAATGACTGTACTAAACCCAGAAAATTGTTGAAAGAAAAATGATCAGCATGTTCTAACTGGGACTCCAAATACAACTCAATATTGCCTGTTGGCTTAGCGTATTTGTTGTAAAGAGTGAAGTGAGGTGATAATGATGTATTCCTACTTGGTCATAGTGGACCAGCTTCATTCTCTTCACAGGTTCATTTATGACTCAATTATCTGGCTGTTAACCTAGTTGCCAGTTTTTCTAATTGCCATGAGCCAAATATCTCTTCTATACAGTTGATCCATTTATTTTAATGGCTGCCTGTTTACTTTCCATCTTTTCTTGCTGCTACCTGTCTTTATATGTAGTCATTAGAAAACAAAGTGTGGCCACGCTTTTTGCTGGAAAGATTTCATGTTGAAAGTGAACACTTTGCAAGTTTTTTGACTGGTGAAAGAAACAAACTTGGAATAATGCCACAAGAGACTTGGGTGGGAATTGCCTTTTTCAAAGGTGCCATTCTTATGAGCCAAGAATTTGTGTTTAGAAGTTTATCTTGAGGGAATAACATGTAATATAGTTTGAAATAAAGATATAACCTTATGAAGAGCATTATAATTGATACCATTGTGAAGGGGGTGAAGTTGTTAAATGAATGACTTTTGATAAAGCTTTCATGCACAGGCAAAATGTATTCACTAGGTTTCTACATAGTGATCTGCTTTTACTTTGTAATTTGTAGTCCTCAAAAGACTTTTTTTAAAAAATAAAGTCCATCCTTACACTTAGGTTTATATAGGTCAGTCTTCTTTTTTTTTTTTTTTTTTAGTTTTTGTTTGTAAATTCCATGCTGATACCTAGTGGTAACTGTATGTTATGTGTCAGATGTATCTACTGTGTAACCATTAAATAATTGCTCTTTTCATCCTTATGACTCCCAACTTCACAGAATTCTGATGTAGCAGAAATTACATTAACATTTCTACAACCAAACCATTGCATGTTGCTGCAGTACAGAGTGTACCTTGTTTATTATATACTGTGTATAGTGAAAGTGTATGTAGTTTTCCAGAAAACTACATTATGATCTTTGATCAGTTTTTTCCTTCATAATGACAAGGTAGTGTTTACTTACTACAATATTAACAGTAAATGGATGTCACCTATGACAGTGTAGTGTAAAGAAAGGGAATGCTTTCTAAAAAGACTTAGCAGATTTTCATTCTGAATTTTAAGTGGCAATTTTGAGTCTCAGCTGCCAGTGCCAACCTCAAATATGTAAATATAGATGTTAAGATTGTACTTGTAATCATGATCCGATAAATGTTCATTGATTTTCCTAACTTGGTGTCAGTTTCTAAGGATAAATCTCCTCTTAGATACCATAATTAAATGTGTACTTAGAGCTGATTAAATTTCTTAATTATTCTGGGAGTATTGTCCTAGAGACATTTATTATATTCTTAAGAAAATTCCAAATGCCACAGGATATTTTAACACAGCATAGTGATGGTGGGGAGAAGAAATGCTTATGACTGAGATTTATTTCCAATTCAATGTTTTTAAGGGTTTTTTTCTCATCAACCCTATCCCTAAAGCATTTTAAACTTTAACAGTACACCAGTGAATTTTTTTTGGCCATACTACGTGGCTTGCAGGATCTCAGTTCCCCAACCAGGGTTTGAACGTGTGCCCTCAGCATTGAAAACATGGAGTCCTAACCACTGGACCACCAGGGAATTCCCCCAATGAATTTTAGTATCACATATATGCTGTATATGTATTGTATCTGCTTTTTACATGAAAAGAATAAGGGGGGTTTGGAGGTCCTGTTTGGGAGTGACACTGCCCCCATTTGAGAACTCACACCCTAATGTATTTTTTAAGGGGAGGACCACCTAGTGGCAGACGTTTGCATTGGCAGACATACCTTTATGTGTGTCCAAATCCTGAAGCAGTATTGTTTTCTGCCAGTCACCATCATTTAACAGCTATGCTTTACACCCTTCCTGCCACAGGCATGAGACAAATCATTTCCCGTTGGCTTTGGACGTCTTGATCGATTCTTGCTTGATTTGGAAATGTATTCATAATTAGAACCATTCAGGTTCCTTCTCATCTATAAAAATCAGTTAAAATCCTAGGTGAATGATCTAATTAAAGTAGGTATAACACATTGATAAATGGCATTGAAATTTTACCAGTGAGTCTACAGTCATACCCAAGTAAGCTGCTTGCAGGAACTGATAGAACTATTATTGGCTGGTTGAAAATGTAACATAGATGCCAAAGTTTTAGTGTACTTTATTAATACCTAGACTACTGAATTACCTTTGTAAAAATTTCCTCCGATGCTATTTACAGGTGCCATGTTAAACAGGCTATTGCATTTCTGTGACAATTCTAGTAAACTGCCTTGCTGTGATCTTTCATGTAAAATATTAGTGCTCTAGTATTGATAAAGAGTATGTCTGTTCACCAGCCTACTGAGGCCTAATGGTTTCACATATAATTATTAAGAAATATGTTTTTAGATGGCTTTATATAAGCGGAATCTAGAAAATAAGTGCTTTTGACTTCAAAATAATGAATTTATAATTGGCCTCTGTCTAAAAAACTTGAATTGCAGTGGATTTGTACTTAAACACAATCTTGCATAATTGTATGAAATTTGGTTTGGATCAGAAAGATTTCCAAACTCCCTTTCCCTCTATTTTTTTTTCTTTCTATATAACTATGGCTATTAGCCACCATACCAAATCCAGTCGTTTTAATTTTCCAATGCACTTATAATCCTTTTATCTTTATTCCAAGATTATAATTTCACCTCTTAATGAATTGAAAAAAGGGTGAGAATATTTTACAAATTCACTCAATTGCTGTCAAGTTATTAACTCAATTAACCTTTAAGTAAAGGCTTCAACTGCTTGTGCCTACTCTAGTGCCCTAGAGGAGACAGCGGCAACAAATCTATTCAGTCCTTTGCTTCGTAGACTTTATCGAGAGGGACCAATATCTCATTAAACTGTGATACAATTAGAATGTTTATAGTTGTATTAGTGTAGGTCTGCAAACTATGCATTCAATATGTATAATGAATTTGGGGTGCTACAAAGTTATCAAATATAATTGAGTTGTTTCAGGGAATTTCCAGTCAGTGTAATAACCATTTTAAAATATCTTAGGATGAAAATAGTTTAAACCATTTTTTTTAAAGCTGAACTCCTGAAGGCTGTGCTTCAAGTTGACTTAGAGGTAAACATTGGGGAAATACAGACTGAAAAATACTCTATTCAGAAAGGTGTTCTACATTCTCTGGCATCTTAAGAATAAAATATTATCTCTGTAAGTACACTTTATTTCCATTCTAGTTAGGATTAATGGATCCTGGCATGGCAAACAGCTGAAGAATGGAGAAAACGGGATAGCTGATAATCCAGATAGTTCTTGACACTCTGAACAACCTCAAGTACAGCCGTTCAAGCCAGTAATTACATTGCTGCATTATTTCTGTGTTTAACTGTGAAATTTGCTTCTTGCCTGTACCCTTGAAGTTGAATAAAATTTCATGAACTCCTTACTAATGTAAAAAGAAGA EMBV3_13590 CGCATAAACTGCCAGGTGATTTAAGTGCTGCTTGGTGATCGGCCTGTGATAGTCACTCTC Gene BVT0102_127631 + 0 NULL GK000029.2:18465091-18477127 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164581 TCONS_00164580 TCONS_00164582 1 XLOC_100266 Coding TCONS_00164580 XLOC_100266 Coding Coding AQP11 29:18473198-18481081 j TSS123117 4179 5 TCONS_00164580_14 89 0.50514477147643 3 0.470185232174575 0.00016441187283079 7.83882223111314e-05 0.000145612474181546 0.000327873040126466 0.000233185922586509 8.55329084060904e-07 1.46749777584174e-16 0.000144359457677693 0.000217124391905537 0.00143423364538723 0.00025858239155861 0.000216816621685716 2.54035206484799e-05 0.000100148369515506 8.1201518068164e-05 0.0066574585670509 0.00260518176445151 3.10304475354323e-08 5.86774708391553e-10 7.29590830126356e-05 8.64440483479869e-05 0.00135702993967013 0.00229974760451527 0.00176179248654366 0.000322994810618507 5.40991336143685e-06 0.000228362680688902 0.000809059453014904 0.000214407460001273 0.000612925154075795 XR_232662.1 LOC100849960 PREDICTED: Bos taurus uncharacterized LOC100849960 (LOC100849960), 0.0 1505 100.00 0.199329983249581 NM_173039.2 AQP11 Homo sapiens aquaporin 11 (AQP11), mRNA. 0.0 1050 80.82 0.272553242402489 TCONS_00164580_1 sp|Q8NBQ7|AQP11_HUMAN AQP11_HUMAN Aquaporin-11; 1e-34 121 86.15 0.831168831168831 0 noncoding 0 0 0 0 -0.0401007966398436 0.700997491824379 0.0972325457849077 0.0996592805547177 CAGGGATACAATGAGGGTATGTTCTGAAAAGCTGAGCCACAGTTTTGGAGGAAGTCTAACAGGAGCTGTATTTAATCCAACTTTGGCACTTTCACTGCATTTCAAGTGTTTTGATGAAGCATTCCTTCAATTTTTTATAGTATATTGGCTGTCTCCTTCTTTAGGTATATTGCTGATGATTGTGATGTTCAATTTTTTCCTTCCATGGCTGTATGACAACCACACAACTAATAAAAAGGAGTAACTATTCTAAAAGACTCAGCCTAAATTACAGGACAGTCAAGCTGGATGTGATAAAGATTTTATCACCTAATATTCAACACTGGTTGCACTGGATTCATCAATATTATCTTCCTTTGAAGAAGCTGCCTTAGAGCTTTCATCACTGGAACTTAAAAAAAAATTACTGTGAAAATGAGGTATCCTGTGTTTCTCAGTTAAGGCTTCTTCTTTTAAGTGTGTATTAAGTGCTGCTAGAAAAGACTCTACATTAAGTATAAATCTCAAGTGATAATTGTTAATTTTGATGAAAAAGAAACTAAGTACAGGGTGAGAAGGGAAAGATGATGGTGGGACCAAGAAAGAGTATGTGTATCAGATGTCATCTGAACGAGCAAGATTTTTAACCAAAACTACAACCAGTCATGCTTACAGAACTGGAGAGGGATACTTTTCAGCCACTACCTCACACAATGATACCATCAGCAGTGTCATCTTTCAATAGGAAAGTTGCTATTAGAAGTAGACATCTACTGATATGGGGATTCCTGAATTTTGAATATATTCTAATTTAAAATATTTTCTCTAAATAGGCAATTTCAGAAGCTTTAGGCGAGCTGTCATTCTTTAACAGACTTTACTAAAGCACTCATACAAAGTTTATGCTTTTCACATTCTCATTTGATTGTAACAGCTACTTTATGAAGTACGTAGGGCATGTATTTTTAATCTCCATTTTACAGATAAGGAAACTAAGTCTGGAAGGGAGTTTACTGCTCTGCCTAAGGTGAAACACAGTCAAATACCATCTTTAGACTTCTACTTCAATATAAAAATATCTTCTCAGTCATCATTAAGACTAAAGGAAAACTGGAGATTTTGAAGAAACATTAAATATTTTATAATGTTACAGTCTGTTTAGGAATTAACAGCTCTTTTCAGGCTTAAAGAACCTTCAAGTTTTCCTCTATCAGAAGCTTTCTTTTATTAAAGTTCAAAAAGGCTAAGTATGTTTTTCTTCAAAGGAATTCTATCATCAGGGTCAGAAATGAAAGCAAAGAGAAAGAAAAGGTTGGGGAGGGGGATGAAATAAGATCTGTTGAGTAATAATCAGTTAAGCAACGCATAAACTGCCAGGTGATTTAAGTGCTGCTTGGTGATCGGCCTGTGATAGTCACTCTCCATAAACCTGCAGACTGAACTCAAAAGCTGCAGGGTACCCAGCAAGGCAGCCAGTTTGAGGGTCATGGACTTTGACTCTTGAACTTAACACAGATGGTAGTAGTTTCTATTTTAAAAAGCAGAGTTCATAAAATTGCAACAATGGCTAAATGGAATCTCTGACTTGTTTCATTTGATCTGCACAGTATTTCAAACAAGTTAGTATTTGTAATATTTTTTTTAAAACACAAAAATCCACAGTTCTAGCTTTTCTTGGAAAAAAAAAAAAGGATGAGTCAACATTAGGGCTGAATTCTGCTATTACAACCACACAAAATAACTGGTCCCAGGACTTCCCTGGTGGTCCAGTGGCTAAGACTCTGACCTCCCAATGCAGGGGGCCTAGGTTCGATCCCTGGACAGGGAACTAGATCCCACATGCCTCAACTAAAGATCTCCCATGCCACAACTAAGACCCAGTGCAGCCAAATAAATAAAATAAAAAAGACTGGTCCCTTTAAAATAATCCCTTTGCCACTCCCTATGTCTTCCAAACATGAAGCTGAATTTCACTTGTTTCATGGCTTTTTCTGTACATAATTTTTAAAAATTCATAAATTCCTATCTCTTTATCATGAGACTGTGGTTTAAGAAAACTGAGTGTTAATTTGTGAAAATACCCAGCTCTCTAAACTTCACTTCTCAGAATTAGAGGTTATGACTTCTGATGACATGGTTTCCCCTTGCAGCCCTCTCAAATGGTAGCTTGGCTCTTTTCTCTGCTGCCTCCATTAATAACGTCATCAGACCATGCCATCTTCTACCTAGGTACTCCTTCCTGCAATTCTATCTACTGTATCTATTGTATCTACTGTACAGCCCCCTCAATTCCTTCTTGATCTTTTCGGAATGTAGTTCCTTTCTCACTCATTCTCTACACTACTCCAGTTACATTTGCTGGTGATTTCAATACTTACAAAGATGATCCTTCCAGGATCTTGGCCTCCCACTTCATTGGCTGAACTTGAAGGCTCTTCAGTAATTTTTCCTTTCTCTTCTGCCTCAGCTACAAATTTGGTCATAACCTTGAGCTTGTCATTACCAGTAACTCAGACTCTTCTCTGACCTCAAACACCTCTTTCCCCAATCACTAACCCCTTTCTCCAGCTCACTTCACCCTACTTTCTTTATCTCCAATACTTTGAACCCCCATGGGGAACTTGGGTCCATTGATACTACCACCATCTCTCTCCCCTATCAATTACTCTCTTCTGAAGCAGCTTAAATTACACTCTTGCATAGAATCTTAATTCCCTTGTTCCTCTAACTCCTCATGCTTACATAGGTTAATCAAAATTTAATTAATTCCAACTGTCTACTTATTCCATGCCTGCCTCCATACATGAAATATAAGAAAAACTGGGTAGCAGTAGGACAGTTCTTTCAAAGACTTGCTATAAACAAACAAAATGTGGGTGGTATCTAAAGGGGGAAATTGGATCAAGAAAGAATTTCTTTTTTTAAGGTGGGAAAGATATTTGGCATGCTTACATGCTGAGAGGAATGATGCAGTAGAGAAAATGATGATGTCGGAAAGGGAGGGGAGATTTAGGTTCAGTTTTTAATAGCTAAGAAAAGATAAAAGCAAATGCACAACTGAAGGGGCAGGCCTTAGCTAGAAGCACAACAGATGGTTCATAGAAACAGGACAAAAGGTAGGAATATATGGGCAGAAGACTTAGGTAAGCAGATGTGATGATGTGAGTCTGAAGAAGCTCAATTTTCCTCTTCCCATTTTTTTCTTGAAGCATTCTAGTCAGGCCTTCAACTCCACCATTCCACTGAAATTCTTGCCAAGCCCATCAATGACTTTAATGTTGTTAAGTCAATGTCTCATACTTCTTACCTATCAGCAGCATTTGCTAGTTTATTGCTTTCTCCTTGTGAATCACTTCACTTCCCCAAAATCATTGTCTTTTCAGTTTCTTCTTCCTCCTTTCCTCCAAACTAAACGATACCTTCCCAGGGCTCAGTCCTCTGAGCTCTTTTCTATTTCTCCTTATTCCCTTGATAATTTTACCCAATCTTGTGGTTTTATAGCAACTGTATCATAACTGCCTAATTTCTATGTCCAGCTTATACAACCGTCCTGAACTCCAGACTCATATCCATCTGTATATGAAACATCTATACTTTGTTGTCTAAGATATAACTCAATACATGCAGCTCTAGTTAATTCAGATTGCAAAGTGTATCCATTCTATTGGTGGTATTTGTAGTTATTCAATATTAAATCAATGCTTCAATAAACATTCTTGTGCACATGTGTTTTTCTAGGGTAGTAGGCTTTTGTACTTTTCATTATGGCCTACCAGCATAGTTTGGTCAAGCCTCCATCTACTTCAGTTCAGTTCAGTTCAGTCGCTCAGTCATGTCCGACTCTTTGTGACCCCATGAATTGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCACACTCACATCCATCAAGTCGGTGATGCCATCCAGCCATCTCATTCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAGTGAGTCAACTCTTCACATGAGGTGGCCAAAGTACTGGAGTTTCAGTTTTAGCATCAGTCTTTCCAAAGAACACCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTTTTCAGCATTCAGCC EMBV3_28971 ATATGTCCGGTTGTATGTAAATTGGAGGTTCATGAGGGGAATCGAGGCCCAGTTCCTGGC Gene GeneID:513902|SMURF1:XM_002698145:571_cdna Constitutive 0 NULL GeneID:513902 25 GENE SMURF1 NULL SMAD specific E3 ubiquitin protein ligase 1 EMBV3_37980 AGGTCTGCTTACAACCAAACATTCAAAGGGGGCACTGTTCACACCCGGCACCTCTCTTTG Gene GeneID:511380|ALKBH2:NM_001024516:129_cdna Constitutive 1 NULL GeneID:511380 17 GENE ALKBH2 MGC142387 MGC90512 alkB, alkylation repair homolog 2 (E. coli) EMBV3_03577 GGTGTCCCCAGGGGCGTGCCTCTCAGAAGTCAGGGACTGACCATCAGCCAGGATCAGGAA Variant GeneID:505134|ADAR:XM_002686013:400_cdna 295^381 1 EMBV3_28696 GeneID:505134 3 GENE ADAR NULL adenosine deaminase, RNA-specific EMBV3_36947 ATCATCAACATCAGTAGCATCATAGGCAAGACACGGGATCCGCTGTAACAGTGTCCTCCC Variant GeneID:532422|HSD17B8:NM_001046324:146_cdna 491^576 3 EMBV3_11204 GeneID:532422 23 GENE HSD17B8 FABGL HKE6 hydroxysteroid (17-beta) dehydrogenase 8 EMBV3_40466 CTACGTCACGATGGGGCAGCTCTGGGCCTTCATCGTTGGCTGGAACATCATACTGTTATT Gene GeneID:100336695|LOC100336695:XM_002695369:67_cdna Constitutive 0 NULL GeneID:100336695 18 GENE LOC100336695 NULL cationic amino acid transporter 3-like EMBV3_00749 AGCCTTCAAGCAAGGATCAAAACATCGGACTTGAGAAACACAACGGGCAGCTACTGCAGG Gene GeneID:617908|LOC617908:XM_002687403:109_cdna Constitutive 0 NULL GeneID:617908 5 GENE LOC617908 NULL similar to histone cluster 1, H2bd EMBV3_15029 CCTGGACCTGGTCTGGAAGGATTCCTATTAATGGAGAAAACCCTAAACATCGGTCATGGC Gene GeneID:537136|KLHDC1:XM_002690884:320_cdna UTR3_Alt 2 NULL GeneID:537136 10 GENE KLHDC1 NULL kelch domain containing 1 EMBV3_34043 GGACTCTGTCTCTGTTTCAGCCAAACGTACTCTTAAGTACTTAAGTATTAATACTAATTA Gene BVV0102_405351 - 1 EMBV3_07600 GJ060109.1:1-4224 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35923 AACCATGTGAAGTGCGTGGAGGCCTTGCTGGAGACCCTGGAGGTGGAGATCCCAGTGGCC Variant GeneID:100125917|RFXANK:NM_001105488:2_cdna 747^932 1 EMBV3_15456 GeneID:100125917 7 GENE RFXANK MGC139634 regulatory factor X-associated ankyrin-containing protein EMBV3_31185 GCTCATTTGGAAAAAGAATCCATTGCTCAGGGCATTTGATGTAGAACTGCTTTACATAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20169 GAATCTGTTGAGATGCCCCAGCAACTCTGTCAAAGCCCAAGCTCAAGAATGCCTACACAG Gene BVV0102_109669 + 0 NULL GK000027.2:14800206-14906478 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12967 CTCATCTTGGGCCGAGCACTTTATGTCGACTACTTTACTGAATCACAACTGATTAGGCGG Gene BVV0102_141692 + 0 NULL GK000025.2:17229005-17247410 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39460 CTTCAGCGGTGTTTACCGTTTAAACATAAGTCAACAAGCAGATAAATGACAAAGAGCGAG Variant GeneID:512871|FAM96A:NM_001035110:49_cdna 370^415 2 EMBV3_14881 GeneID:512871 10 GENE FAM96A MGC127083 family with sequence similarity 96, member A EMBV3_31284 ATGGGAATCTGGGTCCTGGGCAGAGAATGAGGAGGATGCTGCTGAGTGGACAGACCCAAA Gene GeneID:100125915|CTXN3:NM_001105486:20_cdna Constitutive 0 NULL GeneID:100125915 7 GENE CTXN3 MGC148703 cortexin 3 EMBV3_17074 CCGCAGGAATGAGAGAGCCATGCTGGCCAATAAAAATGCTTCCCTCCTCAAATCCTACTC Gene GeneID:540901|PRRX1:NM_001081739:111_cdna Constitutive 0 NULL GeneID:540901 16 GENE PRRX1 MGC148796 paired related homeobox 1 EMBV3_06579 AGGAACCCATCCTTAAACACGACTCGGAAGGACGCGGTCTCAACGCAAGACCGAGCTTCA Gene GeneID:100297748|LOC100297748:XM_002699441:144_cdna Constitutive 0 NULL GeneID:100297748 29 GENE LOC100297748 NULL hypothetical protein LOC100297748 EMBV3_24791 TAAAGCCAACCCTGGCCACTTTCCACAAGGATGTGCGGAGGAAGAGTGACATCTGTGCAT Gene GeneID:616187|RNF5:NM_001105445:198_cdna Constitutive 2 NULL GeneID:616187 23 GENE RNF5 MGC140459 ring finger protein 5 EMBV3_03102 CATCGGTGCCCTGATCGGATTGGGAATTGCTGCCCTTGTTTTACTTGCGTTTGTCATCAG Gene GeneID:515994|LOC515994:NM_001100373:8_cdna Constitutive 0 NULL GeneID:515994 20 GENE LOC515994 NULL hypothetical LOC515994 EMBV3_15522 ATATGTGCCCCCAGATTGTGAGGAAATAGCCTTATCACCAGGAGGAAGTATCGATGATGG Gene GeneID:100048949|ADAM3A:NM_001098166:2_cdna Constitutive 0 NULL GeneID:100048949 27 GENE ADAM3A MGC148330 ADAM metallopeptidase domain 3A (cyritestin 1) EMBV3_04340 TTCCAAAAGGGGGCTGCATTTCAAAAAAGCTGGTGGAGGGCTATGGGAACAATGTCCTGC Gene GeneID:522184|KCNJ15:NM_001099018:60_cdna Constitutive 0 NULL GeneID:522184 1 GENE KCNJ15 MGC160064 potassium inwardly-rectifying channel, subfamily J, member 15 EMBV3_04787 GACGATGGGAATTTGCTGTATGGCTCAGGAAACTCAAACAGGGGCTCTATATCAACCTAG Gene GeneID:530279|NXNL2:XM_002689863:8_cdna Constitutive 0 NULL GeneID:530279 8 GENE NXNL2 NULL nucleoredoxin-like 2 EMBV3_27108 GGCTGCAAAAAATAAATACTGCAAAGCTTATGGGGTGCTAGTGCTCTGACCAGGGATGGG Gene BVT0102_410430 + 0 NULL GK000023.2:44183605-44468891 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42256 AGGCTTCCTACTTGGAGGCTCCCCCAGGACTTTGGACATGTACAGAATGAGCTGAATGAA Gene BVV0101_024799 + 0 NULL GK000011.2:99312495-99314599 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026219 TCONS_00026223 TCONS_00026221 TCONS_00026218 TCONS_00026222 1 XLOC_014943 Coding TCONS_00026223 XLOC_014943 Coding Coding TBC1D13 11:99298011-99314164 = TSS18845 4022 1 TCONS_00026223_4 399 12 0.751733531451213 0.000148477005029447 2.44739399987814e-11 2.6702535673523e-06 0.000332017977940243 4.98767716408032e-05 5.47305347401051e-07 1.21876473097165e-05 5.12851874387583e-07 6.58932340480928e-08 0.00063265001062625 6.0079825101476e-05 0.00010997756585303 1.70384713891211e-05 6.40848922724658e-06 5.13853481837989e-06 0.00409290616740113 0.000879129288979146 0.00219176466744308 6.72203691841897e-06 1.10316223825562e-08 3.8545782887578e-05 1.14727378017477e-07 0.00269119723543557 0.0016343623743443 2.30781119224651e-11 1.29824457482224e-05 2.39068901497352e-11 0.000720510607952898 0.000507367253539622 0.00123691309610955 NM_001206715.1 TBC1D13 Bos taurus TBC1 domain family, member 13 (TBC1D13), mRNA. 0.0 4242 100.00 0.58453505718548 NM_018201.3 TBC1D13 Homo sapiens TBC1 domain family, member 13 (TBC1D13), mRNA. 0.0 2352 74.35 0.910243659870711 TCONS_00026223_4 sp|Q9NVG8|TBC13_HUMAN TBC13_HUMAN TBC1 domain family member 13; 0.0 801 96.00 0.99749373433584 1 coding 0 0 0 0 -0.239581997111205 0.143374249786611 0.00668177526279988 0.890869737312847 GTCAACACCATGTCGAGTCTGCACAAGAGCCGGATTGCAGATTTCCAGGATGTCCTGAAGGAGCCCACAATTGCCTTGGAAAAGCTTCGGGAACTCAGTTTTAGTGGCATCCCCTGTGAGGGCGGACTGCGATGCCTCTGCTGGAAGATTCTCTTGAACTACCTCCCCTTGGAGAGAGCCTCATGGACCTCCATCCTGGCCAAGCAGAGGGAGCTGTATTCTCAGTTCCTGAGGGAAATGATCATCCAGCCTGGCATCGCCAAGGCCAACATGGGTGTGTCCAGGGAGGATGTGACCTTTGAGGACCATCCTCTGAACCCCAACCCTGACAGCCGGTGGAACACGTACTTCAGGGACAACGAGGTGCTGCTGCAGATCGACAAAGATGTCCGGAGGTTGTGTCCAGACATATCCTTCTTCCAGAGGGCCACCGAGTACCCCTGCCTCCTCATCCTGGATCCTCAGAATGAATTCGAGACCCTTCGTAAGCGGGTGGAGCAGACGACCCTGAAATCCCAGACGGTGGCTCGGAACCGGAGCGGCGTCACAAATATGAGCTCCCCACAAAAGAACTCGGCACCCTCCATGAACGAGTACGTGGTGCTGCCCAACGGCTGTGAAGCCCACTGGGAGGTGGTGGAGCGGATCCTGTTCATCTACGCCAAGCTCAACCCCGGCATCGCTTACGTGCAGGGCATGAATGAGATCGTGGGGCCCCTCTACTACACCTTTGCCACCGACCCCAACAGCGAGTGGAGAGAGCATGCTGAGGCAGATACCTTTTTCTGCTTCACCAACCTCATGGCTGAGATCCGGGACAACTTCATCAAGAGCCTTGATGACTCCCAGTGTGGCATCACCTACAAGATGGAAAAGGTGTACTCCACCCTGAAGGATAAGGACATGGAACTCTACCTGAAACTGCAAGAGCAGAACATCAAGCCCCAGTTCTTTGCCTTCCGCTGGCTGACCCTGCTGCTGTCCCAGGAGTTCGTGCTGCCTGACGTCATCCGGATCTGGGACTCCCTCTTCGCCGACAGCAACCGCTTTGACTTCCTCCTCCTGGTCTGCTGTGCCATGCTCATACTGATTCGGGAGCAGTTGCTGGAAGGGGACTTTACCGTAAACATGAGGCTCCTGCAGGATTACCCTATCACAGACGTCTGCCAGGTCCTTCAGAAAGCCAAGGAACTCCAAGACTCACAGTAGCCTGGCGGCAAAAGACCCACGTTTGGAAGAGAAACCCCTGCTGACCCCGGTGCCCTGGCTTCTGGAACATGCAGAAGCCTGTGGGGTCCCATCCAGAGGGGCTGATGCCAGACTGGCGTGCTCCAGGCCTCGCCCTGGCCTCCCGTCAGGGGCCTGCTGTGCCCTGCTTTTTCCTGACCACTGAGCCCGGGCTCCTCCCCACCCTTCAGCCCTGGACCTTCTGCCCAGGCCACGAGCAAGGCAGGGGCTCTTGAGGTGGTTTCCCAGGGCTGGGGCAGACTGGGGGCCCCTCCCTGCCTCTGCTCTGCCCCTCCCTCCCTGCCCTCCTGCTCCGTCTTCTGAGCTCTGGTCAGGGAGGTGCTCGGCAAATGGGCCAGAAACCGCTTCTTCTGGAGGTTGGTGCTTCCTGGGCTTCTCCATGGGGAAGGTGACACTGTGAAGGAGCTAAGAGGCTGCCAGGCCCAGGTCACACCTTCTGTCCCTTTCCCACTGAGTGTGTGTGCGCGCGTGTGTATGTGTGTACTTGTGGGTTGCTGTGTGTGTCTTATTCCCCCTGGCGTGAGCTGCTCCTCCAGTCTGTGTGTGTGTGTGTGTGTCCGTGTGTATCCGTGTGTACGGAGGAAGGTGATCTCCCTCTAGTCTCTGTTTCTTTGTCTTGTCACCTCTCTGCCTCCGTCTCCCTTTCTCTCCCTCAGGCTCTTTCACGGAGGGTGTGTGGCTCTCATCTTTCTGCCGCTATCTCCATTGCTGTCCGTTTGCCCTTTTCTCTTAGGTTGCCTTATCTCCAGCCCCTCGCCTCCCCTCTCCTCAACGTTGGCTCGGAACCCTGGAGACAGAATGAAGAGTTTGGCTCAGCAGAGCTCTCTCAGCCTTGGCCTTTGCAGCCTGTTCCCATCCCCCAGCACTGGGCACCCAGGGCCCCCAGCCCACAGTGCCTCACTCGAGGGACCTGAACCTGTGCCCCACCATGGAATTCTTGGAAACCCCAAGCTGCTGAGAGCAGTTGGCCCGTGAAGAGCCAGCTCCCTCCTGCCCAGGGAGGGAGGAGAGGGAGAGCTGAGTCTTCCAGAGGTTTCCTCAAAGGTCCTCTCCCAAAGGAAAAAAAGCATTAAGGTTGGGATCCAGGTGCTCCGGAGGTGTAGTCATTCCCCTGGCTTCCAGGTGCCGGCCCAGGACAGGCGGGTCTCTGTAAGGGCAAGTGGGGCCAAAGGGAGCCTCTCGGGGGTGGGCGGGGCTGAGCTCAAAGGCTTGGGTCCTGTCCAGGCCTGGAGTGCCGCGTCTCCCCACTCTCAGGAGAGCTGAAGGCGGTGCTGGCCCTTCTCTGGTCTTGTGCTCTGACGGATCTGAGGCAGGTGCATCTGGAGTAGAACAGCTGGCTCCTCCCACCCTGGGCCTGTTCTGACCAGGACCCTCCCTCCTTCTGCGAGGAGGCAGGGGGTTTACATCTGGAAGTCTGGATGATTAGCTCCTCTTCATCTCCCCAGACCGGCCAGCAGGAACCCCCAAAGCCTCCCTGAGTCTGACAGCCAGGACGTGGGGCTGAGGGCCGGGAACAGCTTCCCCCAGGCAGCTCCTGCCAGGCTGTCCCGTGGATGCTTCACTTGCCTTTTTCCTCCTCTCCCAGAACAGTATTTGGGAGATTTTACTACTTATTCAGACTCCTGGTTATTTATTGCAGATTGGCAAGTGCTTGTTTGGGGGATGAAGGGTAGGGCTCAGAAAGTGGAAATATGGTCTTCCTGACCTTTCAGGTCCTTCAGCATCCTCTTCTCCCTGCCTCTGGGACCTTCCTGGTTTTCCAGGAGATCCTGGCTGGAAGGGCTCTGAGCTCTGTAATAGAGCTGGGTCTAAGGGGAACTGGTGTGTAAAGACCCTGGCATGGGGCAGAAACACACTGCTTGCCAGCAGCCTGGTCATCCTCTTCCCAGAACTTGTTGGCTGGTAGTTCACTCCCAGCTGGATCCCTTCAGAGCCTGAGTCTTGGGCCACAGTCTGGGACCCAGCAGACACTGCCCAGGACCCTGATGCATTCTCTCTCGCCTGTCCCTCTGCCCTCCCTCCTGGACCATACTACTTGAATCACTGCATCTGATTCGCCTCATTGGCAGGCCTGGGTCCAGTGCCCTCTCCTTGGCCTTGTAAGAAAGGTCAAAAGAGCACAGGGACCATACCCAGGTTAGACCGAGCTCCCCCAGTGGGAGGACCTGCCGTTGGCAATTCCCCCCTGCCCCACCCCAGACTCTCAAGGGAGGCCCCAAGAGCCAGAGACTCCCAGGCTTCCTACTTGGAAGCTCCCCCAGGACTTTGGACATGTACAGAATGAGCTGAATGAATTCAGGTCTCACTTCGAGGGTCAGAATGTTAGTCTGCTTTTGTTTTTTCATGTTTTGTTCTTTGAATCAATGCTGTTGATGACAAGCTGTCTTTAATAAATTGTGTTCTTTGCAGTAGGCCTTGTATCTGTGATGGGCTGAAACCTTTGAGACCTCAGAGCAGGGGAAAAAAACGAGCAGAAAGTCAGGAGGTTCTTAGAGTGGTTAAAGGAAAAGGCTAGGAATTTGTCCAAAGTGCCTGTTCAACTCTTCTTAAGCAATTGCAGTTTGCAGCTGATGGGAGGAGAGTATGCAATGAGGCAGAGGTATTACATTGTGATTTCATAGTAAGTTCTTTGAAAAAAAGTTGAACTTCACCAAGTCATTTACAGTCCACCATCTGCAGAAAATGACTTGTAACGTGTTTGTCTTTTCTTTGCAGATGTAATTTTAGATAATTGATACATAGATAATTTTATTGATGCAGAGTTTTGTGTATTG EMBV3_35676 CTGTCTGGCACATCCATGCACATCCCTGCTTTATTTCCTTGGACTCTGGTTCTAAGAGCA Gene GeneID:532778|ARFGAP3:NM_001075974:183_cdna UTR3_Alt 2 NULL GeneID:532778 5 GENE ARFGAP3 MGC137888 ADP-ribosylation factor GTPase activating protein 3 EMBV3_00873 ACCAACGTTCTGACGGTGATGGTGGTGATGATGGCAATGATTCTTGGCGGTCGCACAATC Gene GeneID:523783|SLC35E4:XM_002694625:86_cdna Constitutive 0 NULL GeneID:523783 17 GENE SLC35E4 NULL solute carrier family 35, member E4 EMBV3_06995 TACCACAAAATTTCAAGATATTTGTGAGCGCTATCTGCTCTCTGCAAGCACTTAGACAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16082 ACCAGCTGCTTTTGGGTTAGTTTCCTTCTTAATGCATGCGGGCCTCGAGCGGAATCGCAT Gene GeneID:539399|SLC39A9:NM_001101191:187_cdna UTR3_Alt 2 NULL GeneID:539399 10 GENE SLC39A9 NULL solute carrier family 39 (zinc transporter), member 9 EMBV3_22514 CCATCAACCTGGCCTTTGGCTTCGCCGTGACCCATTGTCTCTCCGCTCCTGGGTTCCATC Variant GeneID:780866|AQP3:NM_001079794:76_cdna 240^772 1 EMBV3_22091 GeneID:780866 8 GENE AQP3 MGC143308 aquaporin 3 (Gill blood group) EMBV3_18089 GGTTAGAGCCCGGGAGAAGTATTTCCTAGAAGGTGGTGTTCCTCTGGAGCTTGAGTGTCA Gene BVT0101_081197 + 0 NULL GK000010.2:61593732-61659509 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014328 TCONS_00014313 TCONS_00014296 TCONS_00014303 TCONS_00014308 TCONS_00014312 TCONS_00014324 TCONS_00014317 TCONS_00014323 TCONS_00014316 TCONS_00014319 TCONS_00014307 TCONS_00014320 TCONS_00014299 TCONS_00014327 TCONS_00014306 TCONS_00014310 TCONS_00014300 TCONS_00014314 TCONS_00014309 TCONS_00014325 TCONS_00014318 TCONS_00014321 TCONS_00014315 TCONS_00014297 TCONS_00014305 TCONS_00014311 TCONS_00014322 TCONS_00014301 TCONS_00014304 TCONS_00014326 TCONS_00014302 TCONS_00014298 1 XLOC_008278 Coding TCONS_00014314 XLOC_008278 NonCoding Coding LOC536117 10:61650177-61670468 j TSS10369 361 3 0.982355840315426 2.03981611209998e-05 0.0148231142130107 0.0149253210958678 0.00958353781688854 0.00775474030449735 0.000616660927293946 0.0029269408424968 0.00517603269877164 0.00575769389015555 0 2.94177955905399e-73 0.000965013554877659 0.00289899571914913 0.000907543160706959 1.35497703436201e-08 0 0 0 0.00448880193265853 0.0233687939757585 0.00366211287773297 0 0 5.39691977510867e-281 0.0191209105651737 0.0282051903774293 0.00780393590368838 0.000619787454000333 4.4610381607824e-229 0.00134671959771175 XM_003582726.2 CEP152 PREDICTED: Bos taurus centrosomal protein 152kDa (CEP152), mRNA. 0.0 645 100.00 0.986149584487535 XM_005254237.1 CEP152 PREDICTED: Homo sapiens centrosomal protein 152kDa (CEP152), 3e-66 255 76.19 0.983379501385042 0 noncoding 1 1 1 1 0.000108820487243561 0.999165797846132 0.0466096910355034 0.361949552559771 GGGCGGATTTCTCAATCTAGCTTGAAAAAGGCGGAGACTTCCGCTTCTATGCCCCGTCCCGAGCCGGCATAACCCCGCCCACCAGGCCCGCGTCTAGACTGCAATTGAAGGAAGCGGCTGTTCCTCAATGGGCTCGGGGCTCAGTGGGCTCGGTTGTGAGTAGGAAGACGCTAGCGGGTTAGAGCCCGGGAGAAGTATTTCCTAGAAGGTGGTGTTCCTCTGGAGCTTGAGTGTCACCGTTGTGACAGCATCCGTGGCCTCCGAAGGACCATGTCACTAGACTTTGGCAGTGTGGCCCTGCAGACACAAAATGAAGACGAAGAATTTGACAAAGAAGACTATGAAAGGGAGAAAGAGGTAT EMBV3_08544 TGTCTCAACAGACACCGGAGAATTCACACAGGAGAGAGACCCTATGGCTGCAATGACTGC Gene GeneID:100125304|ZNF613:NM_001103337:177_cdna Constitutive 0 NULL GeneID:100125304 18 GENE ZNF613 MGC151519 zinc finger protein 613 EMBV3_19954 GGGGACCTTAAGATAATTAGGGGAAAACAGAGATACTGAAGGCAAAAAGCCAACACCTGG Gene BVV0102_049723 + 0 NULL GK000030.2:28709519-28950566 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249981 1 XLOC_152924 NonCoding TCONS_00249981 XLOC_152924 NonCoding NonCoding - X:28711346-28712139 - TSS187202 793 3 TCONS_00249981_2 95 1 0 0 0 0 0 0 0 0 0 5.96983259756983e-05 0 0 0 0 0 0 0 0.000586210706174395 0 0 0 0 0 0.000231375815698768 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.104056773079223 0.432504844722786 0.0277837224064361 0.616067464282184 TGTCAGACAGGCACGGCCAGGCTGCGCCTTAGCTGGGAGTCCAGTCCACAAGGGTGCAGAGCCCTCCAGGCTGCAGGAGCCAGGGACCCAGGGGGACAGAAACCGCCGATGCAGGAAGACTTGCTTCTGAGAAAGAAAAGGGATGACCCGAGTCCTGGCCTGAGACTCAGGAGACCTGGCCTCTGGTTCAGTTCTGTAGCCAGGTGTGTTGCTTTGTTTCTGGATCTTCCTGTTCCCACTGGCACAAGGGGGTGGACTATTCGGCCCCTCCCAGGTCTGCTAATCAATTGCATTCGGATAACCTTTCCTCAGGATTATTATTGGCCAGGTGTTGGCTTTTTGCCTTCAGTATCTCTGTTTTCCCCTAATTATCTTAAGGTCCCCTTTTAAGGCAACTTTTAAGTTGCACAGTTGGAGTCCATTTGCAAAATGGGAATGTCTGCCCATGGCCCAGAAGGGCCAGGGACTGCCTCTGGTGGGAATGGGGGAGATGAGGCAGCAAAAGTAATGGATGGAAGAGAATGGGAAGAGTTGACCGAGCTATGTGCCAGTCCAGCCAGACACTTCAGCGATTCTTCCCTGCCTCCTGGGCCCTGCCTGCCACAGTCCACACAGGGTCCCATGGCTGGGCGAAGGGTGGCAGAGAGGTTCTGGCAGAGGTCATCAGCCTTCAGAGAACAGCAAGCCTCCTGCCTCTCCCCTCCTCCTTTCCTGTGAAGCTGATGTCCTAGAATTGTCCCACCCAGACAAGTTTTTCCCTCCCCAAGAAGGGCTTTCTAGTTTATAAACAGCT TCONS_00246632 . 5' 1829 TCONS_00246632 . 5' 1829 EMBV3_03723 CCCCATACTGCTCATCAACCAGCCACTGGGGACGAGAGGGAGGAATTTCACAAATGAAGA Gene BVT0102_302240 - 1 EMBV3_38235 GK000010.2:21369668-21379411 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42877 ATGTAATTCAGGCAGTTATGGGGGCCCTGGAGGGTCTGAGAGTTGCTATTGGACCATGTA Gene GeneID:510177|SF3B1:XM_002685476:179_cdna UTR3_Alt 2 NULL GeneID:510177 2 GENE SF3B1 NULL splicing factor 3b, subunit 1, 155kDa EMBV3_31362 CTAATAATCAAACAGTCATGACCACAATAAAAGAACTATTAAGCTGCTCGAGTCTCCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18686 TCTGCCTAGGGCTATTTCCTCTCCTCTGCCCACCAACAAGTCCTGCTCAATGCCCCCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25906 CCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACTTGCTCGCCAAGAACAG Gene GeneID:525416|CAMK2B:NM_001035357:43_cdna Constitutive 0 NULL GeneID:525416 4 GENE CAMK2B MGC128545 calcium/calmodulin-dependent protein kinase II beta EMBV3_18904 ACGTCTGGCCTGTGTCTTGTCGCGTGTTGTCGCTCTCCTCACAGTCTCCCGATGAAAGAA Gene GeneID:768031|MGC137255:NM_001077090:149_cdna Constitutive 0 NULL GeneID:768031 29 GENE MGC137255 NULL hypothetical protein MGC137255 EMBV3_40775 AGAAATGCTTGCTTCCTGGGTACATCCTGAGTTGGAGTTTTTGAGCCACCAGAGACTGCC Gene GeneID:511381|UNG:NM_001075513:132_cdna Constitutive 2 NULL GeneID:511381 17 GENE UNG MGC140717 uracil-DNA glycosylase EMBV3_38732 CTTGTTCCCCAGCGGAAACCTGCTCCTAACTAGGGGAACGCAGTCTTTTGAGGCCATGAT Gene BVV0102_158570 + 0 NULL GK000021.2:57953845-57965315 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23390 AGAGGACTGATGAGCAAGACGTCCCTGCAGGTGGCAGCCTCCTCCATCTCCTCTGCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10513 GATGACGTCACCAACATAGTGAGGAGGGACGGTGGTACGTGTACCAGTTCCACCGCATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10586 TCCCCTTTCCCAGAGCAGTCTTGGCAGCAGTCTTGTGTACCCTTTCCACTACAGACTGAG Gene GeneID:520598|PLIN1:NM_001083699:123_cdna Constitutive 0 NULL GeneID:520598 21 GENE PLIN1 MGC138955 PLIN perilipin 1 EMBV3_37339 GCTCTTCAGTTAAGATCCATTTTTATTAAGTACCCCCTTCAGGTACCTTCTTACACCTTC Variant GeneID:533993|PSMG2:NM_001046365:146_cdna 306^424 1 EMBV3_30671 GeneID:533993 24 GENE PSMG2 MGC133742 proteasome (prosome, macropain) assembly chaperone 2 EMBV3_24212 CTAATGGCTCCTTTAACCACAAGTCATGGCTCCATGTGGGTCAGGAGAGGACAGGGAAAA Gene BVV0101_006725 + 0 NULL GK000011.2:25173985-25183751 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20047 TTCCTGTCTTCTGATGTTTTCAACCCACCTCTGGGTGCTCTCCACTACAGAAAGTCCCAG Gene GeneID:767828|SUV420H1:NM_001076551:143_cdna UTR3_Alt 2 NULL GeneID:767828 29 GENE SUV420H1 MGC137299 suppressor of variegation 4-20 homolog 1 (Drosophila) EMBV3_24613 CAAAGAAACTCTGCATTCAGATGACCACAGGGGCCTACATAGCTGGAAACCTGCATTCCA Gene GeneID:785806|LOC785806:XM_002684712:46_cdna Constitutive 0 NULL GeneID:785806 1 GENE LOC785806 NULL similar to olfactory receptor, family 5, subfamily K, member 1 EMBV3_39831 GACTAACATGTATGAAGGTGTAGGACGAATCAGAAAAAATCCTATCTGGAGCGGAGTGTG Variant GeneID:616553|PFDN1:NM_001078062:38_cdna 215^299 2 EMBV3_10269 GeneID:616553 7 GENE PFDN1 NULL prefoldin subunit 1 EMBV3_34760 AACCATGATCTCCATGTATGTCCGCCCCAGTGCCCCCCTGTCACCAGATATCAACAAGAT Gene GeneID:783250|LOC783250:XM_002683643:2_cdna Constitutive 0 NULL GeneID:783250 7 GENE LOC783250 NULL similar to olfactory receptor 323 EMBV3_28544 GGTGACGTTCATCCTGATTGCCGTGTGCAAGTTCAAAATGCTGTCCTGCCAGTGGTGCAA Gene GeneID:618642|TMEM174:XM_002696264:50_cdna Constitutive 0 NULL GeneID:618642 20 GENE TMEM174 NULL transmembrane protein 174 EMBV3_20538 TATTTAGATTTTGGTTTTCAGAGCTGTCTTTTTAACTTCAAGCAAATCTTTTTAGTCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18881 TTCCCTTGTGGTCCAGTGGCTAAGTCTCCACACTCCCAATGCAGGGCACCCTGGTTCAAT Gene BVT0102_114671 + 0 NULL GK000025.2:619931-620371 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144073 TCONS_00033900 TCONS_00144076 TCONS_00144074 TCONS_00145805 TCONS_00144077 TCONS_00145806 TCONS_00145803 TCONS_00145804 3 XLOC_088449 XLOC_020133 XLOC_088933 Coding TCONS_00144074 XLOC_088449 Coding Coding FAM173A 25:618386-620674 j TSS108257 1648 2 TCONS_00144074_3 164 0.0946601941747573 5 0.281591604722344 2.67040989335412e-15 1.2992611974724e-15 1.6225984157704e-37 1.06504686102126e-10 2.94623366518721e-05 0 8.36185303402938e-10 9.75048578366143e-05 3.01796054851743e-18 9.7074495142255e-05 4.90345579764955e-05 3.39620703965119e-05 2.37484600027604e-05 1.14084959241838e-05 5.28984801088104e-18 0.000267569513392436 0.000585036721541868 0.000551669469135381 5.17081108524364e-15 0 2.44427744484023e-11 0.000155818795951829 0.000682081842075907 0.000331526961872107 0 3.11726200849666e-66 4.17456986227472e-16 4.94248403165455e-05 0.000294946861691386 0.000216322797706518 NM_001195829.1 FAM173A Bos taurus family with sequence similarity 173, member A (FAM173A), 0.0 1528 98.08 0.525485436893204 NM_023933.2 FAM173A Homo sapiens family with sequence similarity 173, member A (FAM173A), transcript variant 1, mRNA. 0.0 744 85.94 0.372572815533981 TCONS_00144074_3 sp|Q9BQD7|F173A_HUMAN F173A_HUMAN Protein FAM173A; 4e-66 206 78.26 0.780487804878049 0 noncoding 1 1 1 1 -0.400134074767769 0.0580715259828167 -0.000904687362425466 0.985427063702911 CCGGCGTCTTGGAGCAGCCATCGCCCCGCCCCTTCCGGCGTCGGCGACCCGGGTCGGGCAGGCGCGGAGCTGGAAGGAGCTGCGCGGTGCAGGCCGAGGGCGGCGGGGAGGGGCGGTCTCTGGCCCGGGCTGGCGCGTGAGGATCTTGGGCCTGAGCCGGGGAGGGTCCCTGCGGCGGGACGCCCCTAAGCCAGTGCCCCGCAGCCATGGAGCAGGACGACCCGGCCGAGGCGCTGACGGAGCTGCGCGAGCGGCGGCCGGGCCCGTTGGAGCTGCTGCAGGTGGCGGCGGGCTCGGGCCTGGCCGTCTACGCCGTGTGGGCGCTGCTGCTGCAGCCCGGCTTCCGCCGCGTGCCGCTGCGCCTGCAGGTGCCGTATGTCGGCGCGAGTGCCAGGCAGGTGGAGCACGTGTTGTCGTTGCTGCGAGGCCGTCCTGGGAAGACAGTGGACCTGGGCTCTGGGGACGGCAGGATTGTGCGGCCTCCGCCCCGCTGTGGGCTACGAGCTGAACCCCTGGCTGGTGGGACTGGCGCGGCTGCGTGCCTGGAGGGCAGGCTGTGCTGGCAGTGTCCGCTACCACCGTGAGGACCTCTGGAAGGTGAGCCTGAGGGACTGCCATAATGTGTCTGTGTTCCTGGCTCCTAGTGTGCTCCCATTGCTGGAGGACAAGCTGCAGGCAGAGTTGCCTGCAGGAGCCCGCGTGGTGTCTGGGCGCTTCCCCCTCCCCACCTGGCAGCCTGTGGCTGTGGTAGGTGAGGGCCTGGACCGAGTCTGGGCCTATGACATCCACAGAGGTGGGCCCGCTGGGCAGGCTGTGCCAGGGCCCAGTTCTGCCTCCGTACTTGGAACCCCCAATTCTCAGAATGGCTGACTGCAGGCATTAAAGACTCTGGGCTCCACCCTGATTCTCTCTCTTTTTTTTTTTTTTTAATATTTATTTGGTTATGCTGGGTCTTAGTTGCAGCAGTGGGATGTTTTGAGAACTCTTAGTTGTGGCATGTGGGATCTAGTTCCTTGATCAGGCATTGAACCAGGGTGCCCTGCATTGGGAGTGTGGAGACTTAGCCACTGGACCACAAGGGAAGACCCCACCCTGCTTCTTGTTGGCTGGAGGGCTGGGTGAAGTCATCTAGGGGGTGCTGTGGGGAGAGCGCCATGCTGGCTGACTATGAAGAGCTCTCCTCCAGGTTTGCCTGTTGACCAGTTAGTGGTTGCAGGTCCTTGGGTGCTGGGGCTTGTCTGAAGGTATGGCCCCCACTTTCCAGGGGTCCCCTGTACCCACCAGCTTTCTCAGCCTCAGGATCTCCTGCTTGTACCTGCTCAGAGAAACCAGGTTAGTCACCTGCCTAGTTGTGGACAAGCCCTGCTGCCAGTGCCTGGAACCGAGGTCCCCGAATCCCAGGCCCACCTTCCCAGGTGCTGGTCCACGTACTCCTGTAGCTCAGAAAGCTGCTCCTCTGCCATCGTGGCGCGGACCAGCAGCTGTGCCCGCTCCCGCTCCAGCTCTGCCTGGCGTGGGGGACACAAGCCATGAGCTAGGCTCATTGTGAGGAGGGGCCTCGGGCCAGGCTCTGCTCACTACCTGGGTGCCACGGGCGAACTCCTGTAGATTCTGGCGGATCTGGGCCCAGGACGCAGCTTCCAGGCCC EMBV3_13675 ATGTCTGGAGCCTGTTCCATTCTTACGCTTTCGACTTCTCGGTGTGGGAGATTTTCGGGG Gene GeneID:100298578|LOC100298578:XM_002683927:2_cdna Constitutive 0 NULL GeneID:100298578 Un GENE LOC100298578 NULL similar to acyl-CoA synthetase long-chain family member 4 EMBV3_29796 GGCATTAGAGAAGGGATCTGGCAGTAGGGAAACATGTGTGAGATGGCTAAGAGGATGACG Gene BVT0102_062128 + 0 NULL GK000010.2:48258712-48949516 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013852 1 XLOC_008208 Coding TCONS_00013852 XLOC_008208 NonCoding Coding - 10:48377251-48424876 - TSS10179 410 1 TCONS_00013852_1 34 3 0.991453888795565 0 0 8.07966814937934e-63 0 0 0 0 9.59253804445437e-12 0 0 0 0 0 0 7.67158564598309e-27 6.44093289471173e-05 0 0 2.62222703990231e-05 3.22134648361629e-08 0.000276013080218815 0 0 0 2.39673757915763e-35 2.92818509432162e-05 1.75759693760436e-37 0 0 0 0 noncoding GGGGAAGCCATGATCATAGCCACCATGGCTTGGTCCTCTGGAGATGGAGAAGGCATAAGAGAAGGGATCTGGCAGTAGGGAAACATGTGTGAGATGGCTAAGAGGATGACGGACGCTTTTATTCACTCATTCAACGTGGTTATAAGATATTCCTTATTCCCTCTGCCTCGCCTCGACCATCTCCATTAAAAGTCAGTGTCTTCTGTCTGTCTTCATCAGGCGGCTTAACAAGAACACTGGGTTCCTGCTTCAGCGAGGGAATTGGAAGGTTTCACGTTCCCTCAGTGGCATTGGTTTCCCTGCTGGCTCCCCAAACTCAGCAAAATTCAGGAAGCAGGACCTCCAAGTCTCAGCTAACTTCTATCACAAATATCACTTCCTCCTTGAAGCCTTCTTTGATTTGTCACCAT TCONS_00013828 TCONS_00013829 TCONS_00013830 s 3' 107028 TCONS_00013828 TCONS_00013829 TCONS_00013830 s 3' 107028 EMBV3_08023 CACTTGGGCTAGGGGAGAGAGGGATAGATTGTGTATGCTAGTCAGGATCATCTAAGAGGC Gene GeneID:512320|NUDT16:NM_001075560:30_cdna Constitutive 1 NULL GeneID:512320 1 GENE NUDT16 MGC148824 nudix (nucleoside diphosphate linked moiety X)-type motif 16 EMBV3_26555 TGTGGAAAACAGTAGGAAAGCAATGAAGGAAGCTGGTAAGGGAGGCGTTGCTGATGCCAG Gene GeneID:538887|SLC44A1:XM_002689908:15_cdna Constitutive 0 NULL GeneID:538887 8 GENE SLC44A1 NULL solute carrier family 44, member 1 EMBV3_12740 GGATCCTTTCCCCACTTGGAATCTCTAGCACTATCACTCATGGCTGGCATGGAACAAAGT Gene GeneID:512912|TUBGCP5:NM_001102495:10_cdna Constitutive 0 NULL GeneID:512912 2 GENE TUBGCP5 MGC139002 tubulin, gamma complex associated protein 5 EMBV3_25604 TTTCCTGATGCTCTCATCACCAACTACTATGTTGGCTGTGGTCCAGTGTGTTGCTGTTAT Variant GeneID:505763|MPV17:NM_001045929:57_cdna 474^526 2 EMBV3_30898 GeneID:505763 11 GENE MPV17 MGC137578 MpV17 mitochondrial inner membrane protein EMBV3_11445 ATGTTACAGCCCTTACTACCAAAAGCCATCTCCTCCCTGGGCAAAGCCCTGTTCCCTCAT Gene BVT0102_011582 + 0 NULL GK000002.2:132529469-132533706 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104121 TCONS_00106906 TCONS_00104122 2 XLOC_062290 XLOC_062930 Coding TCONS_00106906 XLOC_062930 NonCoding NonCoding - 2:132529592-132531780 - TSS78588 1831 3 TCONS_00106906_2 96 0.110868377935554 2 0.163694558756287 2.97229873129077e-05 6.06571231008373e-05 1.5162157951958e-05 0 0 1.95358450188837e-06 3.18495209668318e-06 3.23026665326391e-06 1.54625758689321e-05 0.000266809786715244 0.000362706249947889 0.000365168622824311 0 7.96416328932849e-05 0 0.0027727144463376 0.000891318011781568 0.000304285759871725 0 0.0014338536476363 6.07026427444056e-05 0.00197634087075004 0.00292735962842638 0.00149975208451977 0.000235552054172813 0.000661836318166439 6.39991030280868e-06 0.00154336078521075 0.00104676721139529 0.00212559713173089 XM_005203285.1 SH2D5 PREDICTED: Bos taurus SH2 domain containing 5 (SH2D5), transcript 0.0 1642 99.67 0.500819224467504 0 noncoding 1 0 0 0 -0.339534181599009 0.0631539497516492 0.00520276401059586 0.928072664521425 CGGAAGGGATGGGTGAGAAACGAAAGCAAAGCAGGCCAACTGGACAAAGCCCTCACCTTTCAAAGGAAAAGTCTGTACTCGACAACCCGAAGGAATGCACTTTATTTGTTTCAAGTCTGCACAGTAAGGAGAGCTGGGCTACCCAGGTGGCGATGGTTCAACAGAGGAGACTGCGGTCTGTGATGAAGACGCAGAGGTGTCTGCACACGTGGGTCAGAAACCTAGCCTTGTTCGCACCGTGTGACCCATGAGTGCTGTGTGCAAGCATGTTTAAGTACTGTGGGGACGCTCCCGACACCCTGTCTGCACAGACAACTCATGCAACAAAATCCGTCCCTCACAGAGGTAAGACCAGTTAGCTGGGCTTCTTAAATGTGCGCGACTCTGGCGCGGTAATCCTGGGCCCACCACCCTCTCCTCGCCAGGGAAATAGGAGGCTGGGGCTTATGAGGGAACAGGGCTTTGCCCAGGGAGGAGATGGCTTTTGGTAGTAAGGGCTGTAACATGAGTCCGGGTTCCCACTCATATTCAGTACAAAACCACTGCTGTGGTTCCAGTGAAAAGAAAGAAAGTGAAGTCGCTCAGTTGTGTCTGACTCTTTGCAACCCCGTGGACCAGGCTTCTCCGTCCTTGGGCTTCTCCAGGCAAGAATACTGGAGTGGGTTACCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATCAAACCCGGGTCTCCCACATTGGAGGCAGATGCTTTTACCTCTGAGCCACCAGGGTTCCAGTGAAATGAGCCCCTAAAGGACAGCTTCCTCCTATCTCTTGTGAAAAGGCCCCAACCAAGACCCTTTCCTGAGCCAGAGGTTGTAAACTGGGATCACCAGGCCTGAACTTCTGAGGCTCCTCATTCTTTTTATTCCGTTGGGGCTGCTCGTTTTTCCAAGAAACAAGAGTGTATTACTTTCAAGGCACTGCACAGTCACATCCTGTCCCCAGAGAGGGGAGAAGGCAGCCACCAAACCCAGACCCAGTGTGGCCTGCAGGATGAGAGGATCAGGGCCCGGTCAGCCCCGTAGGCCTGTAGCTCACTGCTGGCCCCTCAGAATCAAATGGCCAAAGGAAGTGAGCCTGGGTGGTGGTGGGGCTGGTGTCTTGGTGGTTTTCGGAGGGTGTACGGGAAGGGATGAGTCTGCAACACTTCTTCTGTGTGAGCAGGAAGCCCAACTCTGTGGTTCTGAGCAGACAGAGCAGCCGTCCTAATCTGAGGTTCTCTGGGATCCTCTGCCCCATCAGCCTGCTCACACTGCTTTCTACACTCAGCTGTCCAGCTGCGATCTGGGTGACTTGGCTCCTCTCTGCAGCCTCTTAACCCCGCTCCCTTCAGAACTCAAGGGCGGACTCCTCTCATCTCAAAGGACGTGGGAAACAGGCTGTGCTCTGTCTGCCGGGATGTCGCCCCCAAGCTCCACCACGTCGTCCCTGTTTCTCTCACGGAGAGGGTGACTTGGCCCCACACCTTTCTCTCCTGCCTGCCCACACACCTCTCCCTCAGGTGTCTGGCTGCCTTGGTCTGGAGCTCTCTGGGGACGCCCAGTCAGGGCCCCAAGGCCTGGCCTCCTTAGGAGAGGGCCCCACCTGCACTGAAACAACCTTCCTGCCCACCTGGGAAAGCTCCCCACCCAGGAGCAAGGTGAGACCCAGGGAAGGCAAGCATTGAGTCACCCGGCAAGTTCTTGGAAGCCTGGAACTCGGTCTGCTGCACTTGCGATCCTGACGGCCCATGTCCTGGGGAGAAGCCCCTGGCGATCCCCACTCTCAGGGACCCCCACAGGCAGGGAAGTGATGGAAGAC TCONS_00104121 TCONS_00104121 r 5' 0 TCONS_00104121 TCONS_00104121 r 5' 0 EMBV3_22288 GAAGGTCGGATTTTTCCCTCCAAACTTCATTATTCGGGTCCGGGCTGGAGAGCGTGTGCA Gene GeneID:518234|STAC3:XM_002687566:600_cdna Constitutive 0 NULL GeneID:518234 5 GENE STAC3 NULL SH3 and cysteine rich domain 3 EMBV3_20436 CCGCATCTAAGGCAGGAAGATGGTGGCCGCTAAGAAGACGAAAATGTCACTGGAGTCGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38404 GCTCCTTGCCCTGCTTCCGGAAGCACAAAGAGCAGTGCAGGCCTGCAGCTGGTCCTGTCG Variant GeneID:504662|ZNHIT3:NM_001045895:203_cdna 167^229 2 EMBV3_25387 GeneID:504662 19 GENE ZNHIT3 MGC137225 zinc finger, HIT type 3 EMBV3_15720 ACCTGCAAGTCATGTCAGCCCTCTGTGTCGTAATGGAGCCAAGAGATGATGCTTCAGAGT Gene BVV0102_238480 + 0 NULL GK000018.2:62773033-62787902 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091753 1 XLOC_056525 NonCoding TCONS_00091753 XLOC_056525 NonCoding NonCoding - 18:62785733-62786052 - TSS69099 319 1 TCONS_00091753_1 52 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000248384623554375 0 7.86550127085789e-05 0 0 0 0 0 0.0053079192484316 0 0 0 0 0 0 NM_001205697.1 CLDN6 Bos taurus claudin 6 (CLDN6), mRNA. 1e-13 80.6 83.75 0.244514106583072 0 noncoding 0 0 0 0 0.0281989252439304 0.867230183050999 0.0125036804452269 0.796964503515327 GGGTTTTCATGACTCACTGTTGGTGCTGCTGCCCCAGACCTGCAAGTCATGTCAGCCCTCTGTGTCGTAATGGAGCCAAGAGATGATGCTTCAGAGTTGCTAGATCTTTCTCCACCCTGGACATCCCCATCTCAGAGACCAACCTGGAGCCTGCTGTCTGGGTGCTTTCATCCTGTTCCCAAGACTTCCTGCTGTTTTTGGGGGTAGGGCCCCCCACCTATAAGACTGCTGACCTCAGGCTTCTCCATCCTGAGTGCTCTGTTGACCCCCGAGCCTCTCATCTCCAGCCTTGTACATTTCTGCCATGTCCTACCCCGAC TCONS_00084746 . 5' 1837 TCONS_00084746 . 5' 1837 EMBV3_36203 TTACTCTCCTTTCCTGATGCCTTATGTTTTGTGCTCATGATCTTGGCCAGCGGCTCCACG Gene GeneID:787211|BOSTAUV1R409:XM_002695265:275_cdna Constitutive 0 NULL GeneID:787211 18 GENE BOSTAUV1R409 NULL vomeronasal 1 receptor bosTauV1R409 EMBV3_34917 GAGTTTCAATCAATTATTAATGTGGAGAGTGTTGAATGTAAATCAGAGATCTGTCGTCCT Gene GeneID:613433|SYNPR:NM_001046506:8_cdna Constitutive 3 NULL GeneID:613433 22 GENE SYNPR MGC139775 synaptoporin EMBV3_28178 GTACCGGGCACCATGTGTGTCTAGACCGTGTCTTGTCACTCACCCGATACAGGTAATTAA Gene GeneID:100140210|USP30:XM_002694539:489_cdna Constitutive 3 NULL GeneID:100140210 17 GENE USP30 NULL ubiquitin specific peptidase 30 EMBV3_24222 TATATTCTACTTACTGTCTGTCACCAATCAAAGGGTGGGGCATCCAAGGCGCTCTCCACC Gene GeneID:787306|LOC787306:XM_002690762:519_cdna Constitutive 0 NULL GeneID:787306 10 GENE LOC787306 NULL similar to olfactory receptor Olr750 EMBV3_19442 ACACCCATAGTGTGTTGAATAGGCGTCTTCACTGGGGTGGACAGATACCCAGAACATGTG Gene BVT0102_358038 + 0 NULL GK000006.2:118349722-118437488 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211304 1 XLOC_129814 NonCoding TCONS_00211304 XLOC_129814 NonCoding NonCoding - 6:118361674-118362154 - TSS158811 480 1 TCONS_00211304_2 114 0.127083333333333 1 0 0 0 0 0 0 0 0 0.000135545632690114 0 0 0 0 0 0 0 0 0 0 0.000306258843546004 0 0 0 0 0 0 0 0 0 0 0 NM_001081616.2 VMA21 Bos taurus VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) (VMA21), mRNA. 4e-08 62.6 87.76 0.1 0 noncoding 0 0 0 0 0.0177408697827486 0.882022803178361 -0.0301095826556041 0.555688270670289 GCCTGGCGGGCTGCCGTCTGTGGGGCCACAAAGAGTCAGAAACAAGTGACTGAGCAACAACAATGTGGCAGAGTTCTATCTTGTAGACAACGGTGGGGTGCCACGGAGGGTCCAGGTTTGGGGAGCTGTTCGGGGCATGGAGCAGAGGGCTCCATCTGTGAGCCCTGAGCCTGGTGACAGCCTGTGTGCGGACCTGACTCACAGCTCCTGGAACCCGCATTTTTGCCCAGTCCTTCCGGGCCCGACTGTCCACATGCACATGTTCTGGGTATCTGTCCACCCCAGTGAAGACGCCTATTCAACACACTATGGGTGTTGGCCAGTGCCCGGCTCTGCTGTGGATTCCGGTGTTGGAGGAGGTGGTAAGACACCCTGCCCTGCCCTCGGAGTGCTGCAGATGGGACAGTCAGAGAAGTGGCATATATATCAGACCCGCTCTCTAGGACCTCCCCTGTGGGACCCCCATGCAGCGACAAAGAC TCONS_00206373 TCONS_00206374 . 5' 11954 TCONS_00206373 TCONS_00206374 . 5' 11954 EMBV3_20002 TTTGGTTGGAGAAGAAAGCCAGACGAGAAGATTCACTGAGTGCCATCCGTGCAGGCGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01903 GCTGCTTTTGAAGACTGTGTTTTGGAGAAAGCGACCTTGCTGTGAAACAGTGTGGAGATG Gene GeneID:540853|SNAP25:NM_001076246:17_cdna Constitutive 0 NULL GeneID:540853 13 GENE SNAP25 MGC139754 SNAP-25 synaptosomal-associated protein, 25kDa EMBV3_25949 TGGGGCGCAGATCAAAATTGCGAACCCAGTGGAAGGATCTACTGATAGGCAGGTTACCAT Gene GeneID:540653|PCBP2:NM_001034711:54_cdna Constitutive 2 NULL GeneID:540653 5 GENE PCBP2 MGC127996 poly(rC) binding protein 2 EMBV3_13894 AGATGTTGGACACTCCTGAGAAGGCGCCTGATAGTGGGTTACAAGTGTCGCTGCTCTTCT Gene BVV0102_422937 - 1 EMBV3_14051 GK000004.2:114262316-114329662 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43790 CTTTCTTTTACCTTGAGCCCAGGCACGCAGAGGACAAGCTGATCACCAGAGAGTACCAGA Gene GeneID:497200|ORM1:NM_001040502:11_cdna Constitutive 0 NULL GeneID:497200 8 GENE ORM1 AGP MGC128004 alpha-1 acid glycoprotein EMBV3_12948 TTTTGGCAGTGTGGACTATAGATTCCACAGGAGACTAGACGGCTCCTTTGACGTGAAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40372 ATCAAGAGGAACAAGCAGACGTACAGCACCGCCAGCGCAAGCCAGCCACTTCCTACGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37456 CATCCTCACGGGCAGTGCAGAAATGGAGAAAATGGAAGGGGAGGAACCCCAGAAAAAAGA Gene GeneID:527759|AQP6:XM_002687279:161_cdna Constitutive 0 NULL GeneID:527759 5 GENE AQP6 NULL aquaporin 6, kidney specific EMBV3_43221 TGTTGTGCACTGTAGGTGAGTCTTACTAACGAATTTGTTTCTTCTTAGAGGGTGCTGCTC Gene GeneID:533155|MAPKSP1:NM_001075982:11_cdna Constitutive 2 NULL GeneID:533155 6 GENE MAPKSP1 MAP2K1IP1 MGC139753 MAPK scaffold protein 1 EMBV3_07364 GCCAAGGGCTCAGGGCTGGGATCCAGGTTCTGTTGTGCAAGAAAAAGGGAATGAGACTCT Gene BVV0102_317903 + 0 NULL GK000013.2:47176791-47195806 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048702 1 XLOC_028833 NonCoding TCONS_00048702 XLOC_028833 NonCoding NonCoding - 13:47179404-47180409 - TSS35878 1005 1 TCONS_00048702_1 59 1 0 0 0 0 0 0 0 0 0 0 4.09402231650799e-06 2.27779624212832e-06 7.82737689669997e-05 0 4.68059477109763e-06 0 0.00191845133807925 8.25982941884679e-05 0.000149796649534514 0 0 0 0.000450407949876297 0.000483806498797249 0.000200174812949853 0 0 0 0.000410968157200133 4.83045366651765e-06 2.99116524427504e-05 XM_005214464.1 DIP2C PREDICTED: Bos taurus DIP2 disco-interacting protein 2 homolog C (Drosophila) (DIP2C), transcript variant X1, mRNA. 0.0 1452 100.00 0.8 XM_005252426.1 DIP2C PREDICTED: Homo sapiens DIP2 disco-interacting protein 2 homolog C (Drosophila) (DIP2C), transcript variant X1, mRNA. 0.0 791 85.58 0.697512437810945 0 noncoding 0 0 0 0 -0.0910146227929924 0.674047805414516 -0.00781805185739173 0.883671595868974 GGTAGGGGGGACCCAAACACAGAAGATACACGCCCACCATGTGGAAGGGTACGGGGGTGACCCCACCACAGAGGACACATACACCCACAGTGTGGAAGGGTGGGGGGGCCCACCACACACACAGGACACACACCCGCCCTGTGGAAGGGCAGGAGGGGGGCAGTTTCGGGTCAGACACTGATGAGGAAGCGGGACTTAGGCCCAGCAAGGGGGTGTGAGGTTGCTGGTGCCCTCGTGAGGCCTCGGTCCTGCTGCCTGTGCCAGCGGTGAGGGCCAAGGGCTCAGGGCTGGGATCCAGGTTCTGTTGTGCAAGAAAAAGGGAATGAGACTCTCAGTACCACCCACTTAGCAATAAAGGAGGATCGTTCTGTACTGTTAGTGGAAACTGCTGGGACGAGTCGTTCATGAGAATACAGCCAGTGTTTGTCTCGTGACCTTGTGCTTTTGAAGTCAGACAAAACCGTGTGGTCAACTTGCACAAAGGAGGGTACACAGCGACCACCAAGACTCAGACCAACCAACAGGGCGGCTTCCTCATGGTGCTTGTTTGTTATATCTATCTAACCCTGCTTGACACTTTCCCAAGGGAAATGGTCCCTTGATAGATGCTAGCAGCGTTGCTTCATAGTGTGGTGACTGGTTAGAGAGATTCATGTGCTCAGCCAATCACGGTTCCAAACAAAATTTTTATGTGCAAAGGACAGCAACCTTCTCGTATGTTAAACCACCAGTAAGCTTTGTACATCTGTGATAACGCCTGTTTTATATTCAAATGAACAAATAAAAGCTTTTATTTTTGTTGCTCTGAAAATAGCAGTTTCTTAATTGGTCCCCTGGAGAGCTGGGCCAGCTTCCATCCCAGGAAGGTAGTGACTCCTACCAGGAATGGATCCCACTCTGTTTACATAATTTGTTGCATTATTTATCAGTACAGATAATCATACTTTGAACAATGTTTAAATTTTGATGTGGGCATTTATTGCTAAAAAATTCCTATGGCAACAA TCONS_00042833 TCONS_00042834 TCONS_00042835 TCONS_00042836 TCONS_00042837 TCONS_00042838 TCONS_00042839 TCONS_00042840 TCONS_00042841 TCONS_00042842 . 3' 1506 TCONS_00042833 TCONS_00042834 TCONS_00042835 TCONS_00042836 TCONS_00042837 TCONS_00042838 TCONS_00042839 TCONS_00042840 TCONS_00042841 TCONS_00042842 . 3' 2510 EMBV3_23053 CCATCGCTATCATGCTGCATGAGCTCATCAAGCAGATTGTCCTTGGGAAGCGAGAGGTCC Variant GeneID:515029|UPP1:NM_001098976:1_cdna 444^575 2 EMBV3_41077 GeneID:515029 4 GENE UPP1 MGC152519 uridine phosphorylase 1 EMBV3_10191 AGGACTTTCAAAGAGAAAGGGACTTCAGAACACATTACTGCATGTGACACCACTTAATGG Gene GeneID:534327|NHLRC2:NM_001083723:63_cdna UTR3_Alt 2 NULL GeneID:534327 26 GENE NHLRC2 MGC140213 NHL repeat containing 2 EMBV3_12426 GTGGCATTCAGTATTGGTAGCCTAGCATGGTGGGGACTGCCCAATGAAGAGTGTACTGTA Gene GeneID:508361|ELMO2:NM_001083391:946_cdna Constitutive 0 NULL GeneID:508361 13 GENE ELMO2 MGC137761 engulfment and cell motility 2 EMBV3_38131 CTGACACTTGTCTGCCTTTCCAAAAACTTCCTCTCATAGTGGACTCAGGTCCCTGTTGGG Gene BVT0102_441186 + 1 EMBV3_11370 GK000009.2:40123501-40231966 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237135 1 XLOC_144653 NonCoding TCONS_00237135 XLOC_144653 NonCoding NonCoding - 9:40172853-40220006 - TSS177353 1522 1 TCONS_00237135_3 105 3 0.967785035629454 0.000138137173895181 0.000233930681679747 0.000490030732467672 0.000204742149643962 1.09972185286847e-05 0.000270122073274833 0.00042985184739172 0.000268617592277553 2.63294431521311e-05 4.77468066393989e-05 0 0 0.000556612839804064 0.000440611440301109 0.000218549996476859 0 0 0 0.000379588918547097 0.000983512992999594 4.37467826774886e-05 0 0 0 0.000168337421820225 0.000162069789982755 8.4557126451934e-05 0 0 0 XR_232080.1 LOC101905383 PREDICTED: Bos taurus uncharacterized LOC101905383 (LOC101905383), 0.0 1790 100.00 0.651116951379763 0 noncoding 0 0 0 0 -0.0231742113804314 0.845424888376844 0.0050949829151323 0.914045447992187 GCTCCCCCCAACGGCCACCCGACAGGATCTCACAAATGTGGAGGTCATAACATCTTACCTGGAAAGGGATCCCAACAGGACAAATAACATTTAGAAGCTTTTAACAGAGTGCCTGATCTTTGGCAAACAGACTGCAGCCCAAGCACCAGGTGTGCTGGGAGTGAGCTCACCAGGAGCAGGGTGGTGACAGTGGAAGGCTCTCCTGAGTGCCTCCCTGGCCTCATTAGCACCTCACTCACTGCTGGGGACCAGAGTACTAAGATGAAAAAGCACCTTCATGGAGTGTTGGCCCCTTACCTCGGTTTCTACGTTGATAATGTAGAGGCTTCAATTCCCTCCAGATGTTCTCTATCAAGTCAGTCTCCTAGAATAATTGAAGGATATTATCATGGAATCTCAGAACCAGGAAGAGGAAGAGGCAGAGAGCTCATACCCCAAACACTTCCCAAGGGAGCCTGAAGATCATCGGAGCCAAAATACCATCTTGTAAACAAGGAAACGGGAACAGACAGCTTCACTGGATGACCCAGACAGGGCTAAGGTCTTGATTTTGCACTCAAGATGCCCACCTCTGAAAAATGATGTGCTTAAGTGTAAAATAGTCAGCTCTTAATGATGTTGAATTTTAATATGCATTCAGCTCACTACATCATTTACCCACAAGAACTACTCCAAACCCTGCTGGAATTTTCTATCATAAACTTTTCCAAGTCTTTTTGTCCATGTTTTCAGAGCACTTGTAGTAATCTGTTTTACTTATTCATCCATGCAGTAGAGCAAACTTCCCAACAGGGACCTGAGTCCACTATGAGAGGAAGTTTTTGGAAAGGCAGACAAGTGTCAGAGAGAAAGAGGAGGAAGAAGGAAGGAAACAATGAAAGCAATAGCCCATTTTTCAGGTCACTTAAAAAGGCTCCATTTGGACACTGAGCAGATTAGCTGTTTTTCTTTGCTTTTAGTATTTTTAAAGGAAATGCCCCCTCCCCATTTACTTGAACACAATACTAAGCACACACTTCTCCGCACGTAAATAGTCAGGCCGTTCCAGGTTTTGATACACGAGGCAACCTTGGCTTTGCCTTGTTGATTAGTCGTCACAATGGGACCTTTCACTGCAGGACCACATGGTTCCGGGCAACGTGACCTAAGATCTGGCAAAGGCTCCAGGCAGCACAAAGGAACGGAACTTCTCTTTGTGCTGTGAGTGCAGCATCGGTGTTTGGAGTTACTTACAATTGCTCCTTGGTTCAAAGCCCGAGCAACGATCTGAGCCACTCAGCTGTAGTTTTTCACCTCTCTCCTAGCAGTTCCTCAGTGGCCAGAGCTAAGCCAGGCTCCTGGGCAAAGGAGGAGATGGGGCCAGAGCAAAGTCCTGGGGAAACATACAATATGTGCCTATAAAGATATGTTACAGTGGTCAATAAACCATCCCTCTATACCATACCTTGGTAATTATTTTAACTTCTTTTGTAAACTCGTAAATTTTCAGAAATTGTTGAATTAAGCAGAGTCTGAAAGTGGA TCONS_00235226 TCONS_00235229 TCONS_00235230 TCONS_00235231 TCONS_00235232 r 3' 46319 TCONS_00235238 r 5' 11961 EMBV3_15154 GCGTGAGACTCTTGCTGAAGCATGCACAAGTAGCAAGGAGGTTATGATTGGCCCCCAGTT Gene GeneID:505408|C4H7orf64:NM_001101854:24_cdna Constitutive 1 NULL GeneID:505408 4 GENE C4H7orf64 MGC148329 chromosome 7 open reading frame 64 ortholog EMBV3_28780 GCCTACGGGTTTGACTTCTACATCCTCAAGGACCCCCAGCTGCACCCGGATGACCCTGAA Variant GeneID:508216|MRPL28:NM_001045996:96_cdna 471^545 3 EMBV3_28361 GeneID:508216 25 GENE MRPL28 MGC126950 mitochondrial ribosomal protein L28 EMBV3_19358 TCTCCAGGTGTCATCCAAAATTCCCCACAGACAAGGCTTTCGTCCTCATTAGGTGTTGGC Gene GeneID:280997|AMD1:NM_173990:5_cdna Constitutive 0 NULL GeneID:280997 9 GENE AMD1 NULL adenosylmethionine decarboxylase 1 EMBV3_41552 AGACGGCGCTGCTGCAAGACGGGAGAAGAAAGAAGCCAAAGGAGGTCCTGGTAGCTGAGT Variant GeneID:516908|DPCD:NM_001075745:147_cdna 106^543 4 EMBV3_34059 GeneID:516908 26 GENE DPCD MGC137186 RP11-529I10.4 deleted in primary ciliary dyskinesia homolog (mouse) EMBV3_05077 CCAAACGAACAAAAATCAAAGTAGTGGACATATCTCTAGGAGACACGGAGCCAGTGATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40694 GATCCTGCCATCTCTGAAGAAGCCATGGTGACTGTGGTGAATGACTGGGTGAGCTTTTAC Gene GeneID:338381|AHSP:NM_177522:233_cdna Constitutive 0 NULL GeneID:338381 25 GENE AHSP ERAF alpha hemoglobin stabilizing protein EMBV3_01780 GAGCAGGTATAGTTTGCTTATTTATAGCATGTTTCTTTTTGAAAAATTAGTGGTGGACAC Gene GeneID:504752|EIF5:XM_002696846:682_cdna Constitutive 2 NULL GeneID:504752 21 GENE EIF5 NULL eukaryotic translation initiation factor 5 EMBV3_13978 GTAATGAAGATGTCTGCCGAGGAGATGACTATTAAACTTAGTCCATAGCGACCGGAACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03499 TCCATTGTTCGGGATATAGGACGCCATGCGGTTCAGGCCCTTTGTGCCACATATTCCGTT Variant GeneID:539760|ILF2:NM_001038187:195_cdna 77^136 1 EMBV3_06495 GeneID:539760 3 GENE ILF2 MGC134524 interleukin enhancer binding factor 2, 45kDa EMBV3_16929 GCATGCCTAGTGGCTCACTGCATCTCATTTTAGTGCCTAAGAATCACAAGAGGAGAGAGT Gene GeneID:518609|CD55:NM_001030303:64_cdna Constitutive 3 NULL GeneID:518609 16 GENE CD55 DAF CD55 molecule, decay accelerating factor for complement (Cromer blood group) EMBV3_23326 CCTGCAATCAGGTAACAATGCCTCCAAGGACCAGGGTAAGTTCCTCACTCTCTTTTACAC Gene GeneID:782431|LOC782431:XM_002697437:19_cdna Constitutive 0 NULL GeneID:782431 23 GENE LOC782431 NULL similar to olfactory receptor, family 2, subfamily W, member 1 EMBV3_01889 TTTGGCCTACCCTTTTGTTCTTAGATGACCGTCTGTCTGACCCTCCCCCGTTTAGTCAAC Gene BVV0102_194061 + 0 NULL GK000004.2:46389158-46496244 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33408 AAAAAGAGAAAGTTAAAGTACCAAATGTGGATCTGCCTTCAAGTACATATCAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_32229 GACAGCCTGCTTGCGAATTTACTCTGCAGAACGCAAAATCTTTTTCTTCTTTCTGTTGAG Gene GeneID:784254|CA1:XM_002692828:177_cdna Constitutive 0 NULL GeneID:784254 14 GENE CA1 NULL carbonic anhydrase I EMBV3_24773 GGGTTGCTGAAAGAGTAGACTGAGTGAAACTGTTGAAAATACATAATGATGGCTCGTGAA Gene GeneID:527124|CDKN2B:NM_001075894:89_cdna Constitutive 1 NULL GeneID:527124 8 GENE CDKN2B MTS2 cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) EMBV3_39163 GCGGCCTCGCGGCCACCATGTACGTGGGCTATGTTCTGGACAAGGATTCCCCCGTGTACC Gene GeneID:511830|CDX1:NM_001101947:46_cdna Constitutive 0 NULL GeneID:511830 7 GENE CDX1 MGC166229 caudal type homeobox 1 EMBV3_09709 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40948 GCATCTCTCAGGTTGGTTCCCTTCTTGATGGCGGCGGCAGTGCTGTTGTTGAGAGGAAAA Gene GeneID:507491|SLC26A11:NM_001014866:359_cdna Constitutive 0 NULL GeneID:507491 19 GENE SLC26A11 NULL solute carrier family 26, member 11 EMBV3_06859 AGGAGCTGGGGCTGCGGCTGCTGTATGCGGGCCTTGGAGACCCGGGCCAGCCCTGGCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27893 GACTGTCCTATGAGGAGAAAAGTGAGGCGACGGCGAGATCAGGAAGATACCCTGAACCAA Gene GeneID:513209|ZCCHC6:XM_002689820:22_cdna Constitutive 0 NULL GeneID:513209 8 GENE ZCCHC6 NULL zinc finger, CCHC domain containing 6 EMBV3_16011 TGATTAATAACAGGTTGGGGTTCCCCTGTGCTTTTACCAGTAGCATGACCCCTTCTTCTG Gene GeneID:539619|LRCH4:NM_001080738:59_cdna UTR3_Alt 1 NULL GeneID:539619 22 GENE LRCH4 LRCH4 NLRR-1 leucine-rich repeats and calponin homology (CH) domain containing 4 EMBV3_02944 CTGGAGGAGACCCAGCTTGCCGGCTCACAGGTGTTCGTGACGTTGCCGGATTCACAGACA Gene GeneID:534714|ZBTB40:XM_002685721:428_cdna Constitutive 0 NULL GeneID:534714 2 GENE ZBTB40 NULL zinc finger and BTB domain containing 40 EMBV3_25616 CAGTGTAGCCAGGGCCATCTAGTTTGCCAGCTGTTTTCTTACAAACAATTATATACCTTC Gene GeneID:506867|NSL1:NM_001101876:42_cdna UTR3_Alt 2 NULL GeneID:506867 16 GENE NSL1 MGC159505 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) EMBV3_09972 TCTGCATTCAGCTTTAGCAATGAGGATGCGGAAGAACTAGGCATTGAAGGGGACTTCCCG Gene BVV0102_413533 + 0 NULL GK000004.2:114457947-114460928 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10853 TCACGCTTGAGACAGAGGACATGTTGCCCCACTGATCCCCAAGAAATATCCTTGAGCAAA Gene GeneID:617536|TMCO5A:NM_001076467:106_cdna Constitutive 1 NULL GeneID:617536 10 GENE TMCO5A MGC127882 TMCO5 transmembrane and coiled-coil domains 5A EMBV3_33551 CCCTGAGTGCGGTAGCGGCGGGGCGCGCAGAAACAGGAAAATGGCCTCACAGCTGAGGAT Variant GeneID:507032|PDCD2L:XM_002694924:3_cdna 310^370 3 EMBV3_27970 GeneID:507032 18 GENE PDCD2L NULL programmed cell death 2-like EMBV3_32280 TGCGCAAGACCATGGGCGAGGAACTCTACAAGCTCTTCCTAAGCAATGCCGAGAATCTGT Gene GeneID:614845|MGC179469:NM_001102284:298_cdna Constitutive 0 NULL GeneID:614845 3 GENE MGC179469 NULL hypothetical LOC614845 EMBV3_18178 GAGCAGAATGCCTTAGAAACCTGAAGGGTCACTCATGTAAAGTCTGGGGACCTTAAACGG Gene GeneID:532209|MECOM:XM_002684943:186_cdna Constitutive 2 NULL GeneID:532209 1 GENE MECOM EVI1 MDS1 and EVI1 complex locus EMBV3_42752 CGACTTATGGAATCCAAAGTTGAGCTTAACGGGAATGTGACCCTGAAGGAGCTGAATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07106 CGTTTTCCTCTCTTTTACGAACTGCTTGGCAGCCCCAGGTGAAGCATCGGATTGTTTGGT Gene GeneID:516952|SATB1:NM_001102040:14_cdna Constitutive 2 NULL GeneID:516952 1 GENE SATB1 MGC165895 SATB homeobox 1 EMBV3_12410 CAGTGTGCATCAGGTGGCACGCGCAGTAGTGAGTTACTCCTTTTCCTCTGAATGTTGCTT Gene BVV0102_169158 + 0 NULL GK000008.2:100144158-100157960 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226423 TCONS_00226420 TCONS_00226422 1 XLOC_137997 Coding TCONS_00226423 XLOC_137997 Coding Coding LOC100847230 8:100150443-100156920 = TSS169291 1718 1 TCONS_00226423_1 67 3 0.735176034589253 0.00201797359637866 0.00121640242632915 0.0013135267184998 0.00120375818707011 0.00166177669590566 0.000500059311154885 0.00114851543186255 0.000894075629385177 0.00169101585225254 0.000463343223739195 0.000225293904710555 0.000278455542055575 0.000165459393575559 0.000117736294958759 0.000259632265466284 0.00358743699281438 0.000807340442599697 0.00157679754689432 0.00218017471256131 0.00182652508859712 0.000798642871841118 0.00220855700961659 0.00161686546927182 0.00232415253738624 0.00175724255599811 0.00146584749993489 0.000671831410474409 0.0002504114937212 0.000468863355789823 0.000880129970685672 XM_003582571.2 IKBKAP PREDICTED: Bos taurus inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein (IKBKAP), 0.0 3099 100.00 0.99941792782305 XM_005252285.1 IKBKAP PREDICTED: Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein (IKBKAP), 3e-124 450 77.97 0.318975552968568 TCONS_00226423_1 sp|O95163|ELP1_HUMAN ELP1_HUMAN Elongator complex protein 1; 4e-37 134 95.52 0.985074626865672 0 noncoding 0 0 0 0 -1.67179581515075 0.0605655683736374 0.089955696800072 0.186707454785351 TCTCTTTGAGTTTGATGAGCAAGGAAGGGAATTACAGAAGGCCTTTGAAGATACTCTGCAGTTAATGGAAAGGTCGCTTCCGGAAATTTGGACTCTCACCCCCCAGCAGAGTTCAGCTACACCTGTTCTAGGTCCCAATTCTACTGCAAATAGTATCATGGCCTCTTACCAACAACAGAAGACTTCAGTTCCTGTTCTTGATGCTGAGCTTTTTATGCCACCAAAGATCAACAGAAGAACCCAGTGGAAACTGAGCCTTCTAGATTGACTGTGACCTCAGCTAGGAGGCTCTGGCAGAGAAAGCTGTCTTCCTTCTACTCCTCACTCCCCGAGGCCTGGCTTTGGAAACTAGGAAGAGAAGACCATCTACCTTAGCACTGGGGAGAGCTGCTCTGTATAGCGGATCTCGGCAGACACAAATTCTGTTTTATTTTGCATGTAACTGTAATCATTAGCAAGACTTTAAGCTTCAACCAATAGAGCATCATTTTGTGAAAGTTACTGTTCTTTTACTTAGTGCTGGTTGAGAGCATATTCCTGGTATTTATGGTAATCAGGACATTGGGTTTGATTCCCAGCTATGGATCTGAATCATATTGGGACCATAAACAAATCATAGAACTGATTTGTGTTAATTGGGAATAATATTTCGTGGCTTCTATCTCAAGTGTGAAGAAAAGTAAAATAATGTTTTAAAATTGTTTTATGTTCCTTGAGCAAAGCATTATATATAAACAACATGGCTATTAGTGGTCTCAACATTTGGTCAGGTTCAATCATTTAAATGACTTCTTCACCTTGAACTAAGCAGAATGAAAATTGAAATCTATTCTTTAATGTTCTGAGCTTTCCTACCTATGCTGACAGTAATATTTTACCAGGTCATGTGCTTCCAGTTACAACCAGCTTGAGCCTTCTGTCACTACAGTGTCCATAGGGACTGGTTTTACTGCCTGTGAATGTTCTGCTAGAATTAGCAGTATCAGCACTGAACAGTCGAGAATTTCTGAAACAGTGTTGTGTGCACTTGGGATGGTGAGCAGTGTGCATCAGGTGGCACGCGCAGTAGTGAGTTACTCCTTTTCCTCTGAATGTTGCTTCTTGTAACATAGTGTTTTTGTCAGTGTCTAGGCCATTTCATTTATTTTTCTTTATGGTGCTTAACTGACTTCTGTCTTTAAGTTATTTTCTTTGGAAGAAATGGAAATGTTTTCCCTTTTCGGTGAGTCTAGAAGAAGCTTAATTCATTTTGATAACAGTTTTGTTGCTGAGTTCTTGGGTAAGGCTAACAATCTCTTCCACGCTTTAATATCAGAATCAGACTTCTATTTCTCTATGTAAGCTAACAGTAAGTGCTGCTTTTGATCCTCAGAGTGTGGATATACCCAGAATTGTGTAACCAAATAAGCCTTTCCCTAATAATAATGTAAACTACAGAATCTAGGTGTGTTCATTGTACAGTTCAATTTTTGTGTGTCTGAAAATGTTCACAAAATAATAGAAAAAGAAGATCTGTAATTAAGTGCACAGCATCGAAAGGCTGCAAGTGCTTTGTGACTACTCTGTGGTGTGGATTACTGAACATGGTAACCTGTATGATGTTTTAATGTAGTGCTCTTGCTATGGATTATAGTAAAGGGATCCATGCTGATGGATTGGAAATAGAAGTAAACATGTCTTGATAATGGCGTGATTTTGCATGAAAATTCACTTTCCTT EMBV3_39860 GGCAGCTGGCCCTCGCTGATGAGAGGTTCCCTCTTTTTGTATGTGCATTACCGTGTCTTC Gene GeneID:618232|MED15:NM_001099175:124_cdna Constitutive 0 NULL GeneID:618232 17 GENE MED15 MGC148472 mediator complex subunit 15 EMBV3_14463 ACAGTTGACAAAGGATTAATCCCAAAAATACACAAGCAGCTCATACAACTCAATGTGGGG Gene BVT0102_040606 + 0 NULL GK000028.2:29125340-29218575 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159448 TCONS_00160505 2 XLOC_097421 XLOC_097674 Coding TCONS_00160505 XLOC_097674 Coding Coding PLA2G12B 28:29122898-29130322 o TSS120013 1431 3 TCONS_00160505_5 78 0.745632424877708 3 0.807624949481342 0.000435121136239979 0.000152450536533458 0.00015173615864702 1.42965227983639e-05 5.14059462939558e-12 0.000204173610994741 0.00011750812448622 0.000367301156439239 0.000148819994129914 2.92971499929718e-172 4.50151128968008e-164 0 2.89563311211421e-190 9.44051814970818e-107 1.06463362592716e-305 0 0 0 0.000414729202043075 0.000296310008046859 4.94935852707773e-05 0 0 3.72740820627603e-282 0 6.95954258317695e-05 1.46998307688857e-44 0 0 0 XM_002701174.3 LOC100335269 PREDICTED: Bos taurus putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase-like (LOC100335269), mRNA. 5e-114 416 85.71 0.250873515024458 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 3e-66 257 73.55 0.3319357092942 TCONS_00160505_5 sp|Q9BX93|PG12B_HUMAN PG12B_HUMAN Group XIIB secretory phospholipase A2-like protein; 5e-28 102 84.21 0.717948717948718 1 coding AGTGGGATTTATTTGGGAGATGCAAGGATGGTTTAGTATCTGCAAATCAAGCAATGTGATACACCACACTGACAAAATTAAGGATGAATATCATGTAATCATCTCAAGAGACACAGAAAAGTAGTTGATAAAATCCAACATCCATTTATGATTAAAAACTCTCAAAAAAGTGGGTACAGAGGGAATGTACCTCAACATAATAAAGGCCACATATGACAAATCCACAGTTAACATCATACTCAATGGAGAAAATCTGAAACTTTCATCTAAGATTAAGAACAAGACAAAGATGCCCATGCATACCACTTTTATTAACATTGTATTGGAAGTCCTAGCAGATCAATTAGGCAAGAAAATGAAATAAACAGCATCCAAATTGGAAAGGGGGGAAATAAAACTGTCACTATTTGCAGATGACATGTTATTATATATAGAAACTTCTAGAGACTCCACTCACACACAAAAATATTAGAATTATAGAGCAATTCAGTACATTTGTAGGATACAAAAATGAATATATGAAAATGTTGCCTTTCTATACACTAAAAACTATCAGAGAAATTAACAAACTAATATACAATTGCATACAAAGAATAAAATATCTAGGAATAAATTTAACCAAAGCAGTGAAAGACAACTCTCAACATGGGAGAAAATAATAGCAAATGAAACAGTTGACAAAGGATTAATCCCAAAAATACACAAGCAGCTCATACAGCTCAATATGGGGAAAACAAACAACCCAATCAAAAAGTGGGTAGAAAACCTAAACAGACATTTTTTCACAGAAGACATATAGATGGCTAAAAAACACATGAAAAGATACTCAACATCACTCATTAGTGAAATGCAAATCAAAATTACAATGAGGTATCACCTCTCATCAGTCAGAATGGCCATCAAAGTCAAAAATTCTACAAACAATAAATCCTGGAGAGGATGTAGAGAAAAAGAACCCTCTTGCACTGTTGGTGGGAAGATAAGTTGATGCAGCACCTGGCTACAGGATGACGTGGGCCATCAGCTTCTTGATTTTGTGGCTCAGCCTGGCTGGTGGCCTGGCTCAGAGTGACACCAGCCCTGACGAAGAGGAATCCTATTCAGACTGGGGCCTTCGGCACATCCGGGGCAGCTTTGAATCTGTCAACAGCTACTTCGATTCCTTTATGGAACTGCTTTGCAATGCAGAGAGCCAAGAACCTGAAGGCTGCACCCAAACAGTACAGTCTCCTCAAGTGGACTGAGAACCAAGCAGGCCTTTGAACAAATAGCATCTAGTAACTGACTGTTCTTTTACAGTTTGCTTTGTGACACATTTCTTGGGCAAAACACTTTCTCCAAAGCACTGGCTCCCAAACTTGCCTGTGCTGCAAATCCCCTTAAGGGCTTGTTTAAAAAGACTGCTTCACCCCCACCCCTCAAATACTGGTT TCONS_00160504 TCONS_00160503 s 3' 1829 TCONS_00160504 s 5' 0 EMBV3_35517 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10163 AATGAATGAGCCATTGTGAAGAGAGAGCCCCAGGACGCACGCGGATTATGTGGTCAGTAA Gene GeneID:511514|HIRA:XM_002694652:169_cdna Constitutive 0 NULL GeneID:511514 17 GENE HIRA NULL HIR histone cell cycle regulation defective homolog A (S. cerevisiae) EMBV3_34355 CCTAAGACGGGGTCCAGGCCCTATGAATTCCTTCTTCAGTTGCACTGGGTCTTCTTTGCT Gene BVV0102_060730 + 1 EMBV3_22296 GK000030.2:82147631-82261155 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247355 TCONS_00247356 1 XLOC_151307 Coding TCONS_00247356 XLOC_151307 NonCoding Coding - X:82206371-82223345 - TSS185259 1463 2 TCONS_00247356_2 85 0.401913875598086 3 0.913981028692629 0.000362593815370006 0.000461518957543785 0.000507079626718139 0.000129692824548949 0.000263060629674935 4.29653227331923e-69 7.58283464131251e-05 0.000491725767273944 0.000309571988506984 0 0 3.47235877328021e-05 3.1601620243527e-06 5.1808710310451e-06 2.23922796222007e-06 0.000801684576406641 0.000204845565093309 9.82382603183735e-14 0.000182768540534079 0.000152727110734736 0.000229410747926421 8.51918414604343e-09 0.00139957394579532 0.000744203762071498 0.000138213093898372 0.000208243209432148 0.000345522558327678 2.04084419753832e-17 4.31072902933646e-17 0.000112912601093454 XR_232508.1 LOC101902488 PREDICTED: Bos taurus uncharacterized LOC101902488 (LOC101902488), 3e-155 553 85.12 0.336295283663705 0 noncoding 1 1 1 1 0.0373402331316274 0.733811762242467 0.020815702400378 0.73739521348994 GTTGCCGGGGGAGCCATTTTGGGAGTGCACGGCGGTTCTGCGCGGGGCCTATTTGGCTGTGACGCCTAGCCCAGGTTTCTACCGCCCTATGCCTTAGGGCTCATCTAAAACCTAAGATGGCGGTATTTGCATAGGGTGTAAGCGCTGCAGGCATACTTTATGTGAAAAGACGGCCAAAGGACGAGTCTCCTAAGGAATGTCCAGAAACGCGGATATTTGTGTTGTGCCATAAGCCAGGTGGCATCACAGACTCAATGGACATGGGTTTCGGTGGACTCCGCAAGTTGATGATGGACAGGGAGGCCTGGCATGCTGCGGTTCATGGGGTCGCAAAGAGTCAGACACGACTGAGTAACTGAACTGAACTGAACACCTCCTTGAACCTCACCTGCCCAGCCCTAGATACCAAGAAATGGCTCTGTGTGTAAAGAATCTGCTTGCAACGCAGGAGACACAAGAGACCACAGCTTTGATCCCTGGATCAGGACGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTTGTGCCTGGAGAATCCCATGGACAGGAGCTTGGCGGGGTACAGTCCAAAGGATTGCAAAGAGTTGGACATAGCTGATCAATTAAGCAAGCAAGCAAGCAAGCAATGTGATGCTCTTGATTACTGTAGCTTTTTTTTTTATTAACTCCTGACGTCAAGTACTTTATGTCTTTCCAACTTTTTTCCCTTTTAAGAAAATTGCTTAGGGACTTCCCTGGTGGTAATACAGTGGATAAAAATCTACCTGCCAGTCAGGGGACATGGGTTTGAGCCCTGGTCTGGTAAGATCCCACATGCTGTTTAGCAGCTAAGCCCATGCGCCTAGAGCCTGTGCTCCACAAGAGAAGTCACCACAATGAGAAGCCTGTGCACCTCAACTAGAGAGTAGCCCCTGCTCTCTGCAACTGGTGAAAACCCATGTACAGCAAAGAAGACCCAGTGCAACTGAAGAAGGAATTCATAGGGCCTGGACCCCGTCTTAGGCCTGTTCATGCTGATCATGCTTGGCCACCTCTCCAATGGACTCTGGACTCTGTGCTTAGTGCCTATGGAAACTACAATAGAAAGATAAGACCCCCTCTGGACAGGGGAATCTTGAAGATCACATCCAGGTTACTCATCGCCTAAGAGAAAACATACTCTAATCACCCCTGCCTCCGGACAGGTCATAAATTCTTTCTGTATCTATAGGAGTGTAACCACAGGCTTATTGATTATTAACTCTTTGAACACCTAACACTTGATAACACTGGAATAATGGGGTTATTGTGATTGTATTTAGCCTTCCTTTGTTTTATGTAAGTCTCAAGGAAATTGGGGTGGTGGGTTTGGACACGTACACATGGGGTATAAAAGATTTTCACAAACGTTGGTCGGGGTCCTTGGCTAAGAGGAGACTCTGCCTTGGGACTGCTGGTGTAATAAACTGCACTCCACTA TCONS_00244826 TCONS_00244828 TCONS_00244827 r 5' 53550 TCONS_00244826 TCONS_00244828 TCONS_00244827 r 5' 37637 EMBV3_14883 TCCTACCACATTCCATGTCTGAGTTTCTGCGCTCGGGGTGGATTTTCCTTGTCCGTGGAA Gene GeneID:510486|TMCC1:NM_001101925:104_cdna Constitutive 0 NULL GeneID:510486 22 GENE TMCC1 MGC152481 transmembrane and coiled-coil domain family 1 EMBV3_24808 CGTCACTATAGGAGACATTAAAACGGGAGCACCACAGTATGGGAGTTACGGTACAGCACC Gene GeneID:100138550|FIP1L1:XM_002688273:26_cdna Constitutive 1 NULL GeneID:100138550 6 GENE FIP1L1 NULL FIP1 like 1 (S. cerevisiae) EMBV3_09612 GTGGGGATAAAGTGAAAGCCTGGGCTTGGGTTGCCCGACTATAATGCTGAAGTTACTTTG Gene GeneID:540420|TINF2:NM_001098114:243_cdna Constitutive 2 NULL GeneID:540420 10 GENE TINF2 NULL TERF1 (TRF1)-interacting nuclear factor 2 EMBV3_14594 AAAGGGAACGGTTATCATCATCGCAAATCAGGGTGAGCGAATTGTCATCCCTCCTGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16298 ATGGTGCTGTCACTGCCATCCCTCGGATGAGTGAACTCAGGTTTAGGGAGGTTCAGAACT Gene GeneID:100337277|LOC100337277:XM_002692290:1659_cdna Constitutive 0 NULL GeneID:100337277 13 GENE LOC100337277 NULL hypothetical protein LOC100337277 EMBV3_37401 AGCTGGTGGCTGGTTCCTATTTCTGCGGTTGGGTCAGTTCCATCCTTCAAGTCAGCGTAA Gene GeneID:512340|LOC512340:XM_002687518:450_cdna Constitutive 0 NULL GeneID:512340 5 GENE LOC512340 NULL similar to olfactory receptor MOR210-5 EMBV3_08981 GACTTTCCGGTTGCAATAGCTTTTGCATTTATTATCATTGCCTTGCAGGAGAGTTGCATC Gene GeneID:615644|PUS7:NM_001076939:12_cdna Constitutive 0 NULL GeneID:615644 4 GENE PUS7 MGC142717 pseudouridylate synthase 7 homolog (S. cerevisiae) EMBV3_40178 GTCAAGTGCTGGGAAAACTACCCACATCAGGACTTCAAGGAGCAGGTGATTCATCACTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17117 AGATCGATATGAAAGGCTGCATAAAGGTTTTGAAGGAACAGGCCCCGGACAGTGTGGAGG Gene GeneID:504763|FAM49A:NM_001075172:51_cdna Constitutive 0 NULL GeneID:504763 11 GENE FAM49A MGC139573 family with sequence similarity 49, member A EMBV3_19127 AAACAAAGGCCTACGTCTTCTTTGAGAGGGACTTTGGGGACATGCACTCCTACGTGCGCA Gene GeneID:521857|TRIB1:NM_001101105:41_cdna UTR3_Alt 2 NULL GeneID:521857 14 GENE TRIB1 NULL tribbles homolog 1 (Drosophila) EMBV3_06175 CTCTGGGCTTGTGCTGTTGCCCTCTACATGGGCCAGCTGCAGCTGGATGTAGAACTGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34083 GTGTTTCTCTTTGCCTTTGGGCTAGAAAACCTTCCCCCAAATAACCAGTTCCTCGCCCTC Gene BVV0102_340317 - 1 EMBV3_06574 GK000026.2:41271590-41823602 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18016 GCTGCCCGCAGACTAATGTTTACGTGCTGCACCAGGTCTTAGTTGAGGCATGTGAGATCT Gene BVT0102_004836 + 0 NULL GK000018.2:3744714-4183789 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085278 TCONS_00085279 TCONS_00085277 1 XLOC_051827 NonCoding TCONS_00085278 XLOC_051827 NonCoding NonCoding - 18:3960031-3982365 - TSS63715 452 2 TCONS_00085278_1 70 0.294247787610619 3 0.979895222316751 0.00596110897481153 0.00447726645660199 0.00661441507044761 0.00268046002736893 0.00145105586913335 0.000701105170900679 0.00188246823647169 0.00162746894272208 0.00157750352190662 0.000127439032914709 0.000255759237160754 0 5.29998895387759e-05 0.000331470175167498 0.000838876094782426 0 0 0 2.7741776684264e-05 0.000159089761634188 0 0 0 0 0.00106108153595548 0.000604669077013849 0.00116015250832548 6.37317500281506e-05 0 0 XR_238240.1 LOC101908229 PREDICTED: Bos taurus uncharacterized LOC101908229 (LOC101908229), 3e-91 338 100.00 0.411504424778761 0 noncoding AGTTCTTTCTAATTCTACAGGCTTTATGACACTCCTTCCAACCTACCGAAGGCATGCTCCCACCCCCTTGAGAAGGATCCGGAGGGAGGCTGCTGGGGGCCGAGAGGCTACACGGAGGAGGGAAGCTGACAGCCTGGAGCCAAGACAGCCCCAGAAGGAGGGATGTGACCCACACCAAAGCACCTGGGCCGGAGAGTCCCACGAAGACCATGGGGCTGCCCGGCTGCCCGCAGACTAATGTTTACGTGCTGCACCAGGTCTTAGTTGAGGCATGTGGGATCTGGTTCCCTGAACAGGGATCGAACCCAGGTCCCCTGCACTGGGAGTCTTGGCCCCTGGACCACCACGAAAACCCCTGTGTTTTATTCTTAGACGAAGCATACGTCCTACGTTTCTGTTAAATAATAAGCCGTGAGTCATTTAATAAAGCAGCTGATTAATTTGATTAAAAG TCONS_00082111 TCONS_00082112 r 3' 215319 TCONS_00082111 TCONS_00082112 r 3' 215532 EMBV3_05192 GTTAACCAGCATCTGGAGGAGGCACGGATGTCATAGCCTGGGGCAGATCCAAATGTAATC Gene GeneID:512719|SH3GL1:NM_001046130:18_cdna Constitutive 0 NULL GeneID:512719 7 GENE SH3GL1 MGC128778 SH3-domain GRB2-like 1 EMBV3_05226 CATGGTGTTAGAGGTCCAGAGGTACCCGTAGTATACCAAAATCACAGTGGACATCGGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35641 AGATCGCGCAGCTGGCTCGGCAGTACGCGGGGCGCTACTGGGCTGAGATCTCGGATACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00318 CCTCTACCCCCCTTGTTTCTGGTGACCTTCGAGGCAGACAGGAATGATGGCAAAAAGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16745 TCCTACAGTAACACTTAGTATGTCTGCAGATGTACCTCTGAGTACATATGTAGATAATGT Variant GeneID:515499|PCNA:NM_001034494:35_cdna 820^995 3 EMBV3_25741 GeneID:515499 13 GENE PCNA MGC128125 proliferating cell nuclear antigen EMBV3_29118 ACTCCTGAACTGGCGATTATGTATTCAAATGACTTTGGGCTCTTGGTTCCTGGGGGCAGC Gene GeneID:509217|LOC509217:XM_002689117:75_cdna Constitutive 0 NULL GeneID:509217 7 GENE LOC509217 NULL similar to olfactory receptor, family 2, subfamily T, member 12 EMBV3_42264 TGTGTCCTGCTGGTGGCCTTTTCGTGCTCATTGCCTCACTTCCACTCACTCCTACATACA Gene GeneID:100337234|LOC100337234:XM_002683718:2_cdna Constitutive 0 NULL GeneID:100337234 11 GENE LOC100337234 NULL olfactory receptor, family 1, subfamily F, member 1-like EMBV3_40275 ATTGCCATCCTAGTCCAGGGGATCTTCCCAACCCAGGAATCGAAGCCACATCTTCTGCAT Gene BVV0102_237176 + 0 NULL GK000009.2:58455864-59268416 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241041 1 XLOC_147705 NonCoding TCONS_00241041 XLOC_147705 NonCoding NonCoding - 9:58721172-58721703 - TSS180719 531 1 TCONS_00241041_2 73 0.711864406779661 1 0 0 0.000264930602217273 0 1.56386453467818e-05 3.09929102247115e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 5.40182735163368e-05 4.0629514674018e-05 0 0 0 0 0.000130479698672623 1.3268311565112e-05 0 0 0 0 XM_005192537.1 KIAA1875 PREDICTED: Bos taurus KIAA1875 ortholog (KIAA1875), transcript 8e-62 241 75.26 0.713747645951036 0 noncoding TGCAGCCCCATGGACTGTAGCCCACCAGGCTCCTTTGTCCCTAGAGTTTTCCTGGCAACAATATTGGAGTAGATTGCCATCCTAGTCCAGGGGATCTTCCCAACCCAGGAATTGAAGCCACATCTTCTGCATTGCAAGCAAATTCTTCACCACTGATCCATCTAGGAAGCCCTTCTGGAACATGTGCTTAATTTCTCAGTCGTGTCTGACTCTTTATGACCCCATGGATTGTAGCCCACAAGGCTCCCCTGTCTATGGGGATTCTCCAGGCAAGTATACCGGAATGGGTTGCCATGTCTTTCTCCAGGGGTTCTTCCCAACCAAGGATTGAACCCAGGTCTCCTGCACTGCAGGCAGATTCCTTACCATCTGAGCCACCAGAGAAGCCCAATATGGCACATAGAAGTACTAAAATTTGTTTTAATATTTCTGAGTAAATCCAGAAATAAGTAAGTCTGTTATTTTTCCAAGTGAAGAAACAAAAGCCTAAAGGAATGAAGTGCAAGATAATCAATTTGTTAAGGTAGAGAC TCONS_00235595 TCONS_00235596 TCONS_00235598 TCONS_00235602 TCONS_00235603 TCONS_00235604 TCONS_00235605 TCONS_00235606 TCONS_00235607 TCONS_00235608 TCONS_00235609 TCONS_00235610 TCONS_00235611 TCONS_00235612 . 3' 888096 TCONS_00235595 TCONS_00235596 TCONS_00235598 TCONS_00235602 TCONS_00235603 TCONS_00235604 TCONS_00235605 TCONS_00235606 TCONS_00235607 TCONS_00235608 TCONS_00235609 TCONS_00235610 TCONS_00235611 TCONS_00235612 . 3' 888626 EMBV3_42223 TGGAGTTGTATATCCTCAGAAGGGAAAGGATTCAGTGTGAGCCTGAGTGGTGTGACAGAC Gene GeneID:510559|LTBP1:NM_001103091:11_cdna Constitutive 0 NULL GeneID:510559 11 GENE LTBP1 MGC166121 latent transforming growth factor beta binding protein 1 EMBV3_36198 GAGTCCAAGGTCCAAAGGGCAGTAAAAGCACCCAGTCTCTTCAGAGTTCAAACCAAGAGC Gene GeneID:518980|OVCH1:XM_002687714:8_cdna Constitutive 0 NULL GeneID:518980 5 GENE OVCH1 NULL ovochymase 1 EMBV3_02413 AAACCACCTGTGTCTCCAGTCCCTATTCGACTACCTGCAGCCGGCCAGTCACCTTTGTCT Gene GeneID:781604|KRTAP11-1:NM_001080740:17_cdna Constitutive 0 NULL GeneID:781604 1 GENE KRTAP11-1 NULL keratin associated protein 11-1 EMBV3_41040 ACGAATTGGCTTTTTAGCAACACCAGAAAAGCAAACTAGCTTTCCAAAAACTTCTTAAAA Gene GeneID:281240|IGF2:NM_174087:212_cdna Constitutive 2 NULL GeneID:281240 29 GENE IGF2 MGC140034 insulin-like growth factor 2 (somatomedin A) EMBV3_33761 TCTTCTTTATTCAGGAACTGGGACGCGTGGGATGGCTCCTTAGTCAGGAGGTTGCAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07247 CTTGCTTCTGAGACAGAAGTAGCTTCTTTGCTATGATCTACAGAAAGCCAGCCCTGGCCC Gene BVV0102_117626 + 0 NULL GK000005.2:32264562-32277007 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03949 CTTCTGGCAGCGGTACCCGAATCCCTATAGGTGGTGGAGGAACGATGTGTTTACCGTGTG Variant GeneID:523609|PRELID1:NM_001038138:32_cdna 265^490 2 EMBV3_00690 GeneID:523609 7 GENE PRELID1 MGC134414 PX19 PRELI domain containing 1 EMBV3_11881 TGCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTCCTTGTTAGGCC Gene GeneID:782399|LOC782399:XM_002686643:28_cdna Constitutive 0 NULL GeneID:782399 4 GENE LOC782399 NULL similar to ribosomal protein S15a EMBV3_32024 AACTAGTGAGAAGCAGGTCTCGGGATAGGAAGCAGGACGCTGTGAGGTTCATGGCAGAGA Gene BVV0102_179396 + 0 NULL GK000011.2:29808335-29904329 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024566 TCONS_00024569 TCONS_00024565 TCONS_00024567 TCONS_00024564 TCONS_00024568 1 XLOC_014537 Coding TCONS_00024565 XLOC_014537 NonCoding Coding - 11:29868713-29869325 - TSS17995 217 1 TCONS_00024565_1 47 2 0.648117839607201 0.001017642757116 0.000605834914811575 0.00142513838651341 4.49174480366709e-05 0.000260537911173139 0 0.000249715243585254 0.00115855997153696 0.00153177742497946 0 0 0 1.32225053556715e-05 0 0 0 0 0 0.000288058975478729 0.000188525914364427 1.48962166655384e-30 0 0 0 0.00150610438084946 0.00300243005926339 0.000352190628728371 0 0 0 0 noncoding 1 1 1 1 -0.22980847744522 0.144687927807013 0.0526352578365064 0.46147590567198 TTCCTGTTTGGCGAAGAGCTGAGCTGAACTAGTGAGAAGCAGGTCTCGGGATAGGAAGCAGGACGCTGTGAGGTTCATGGCAGAGAACTGGGCCAGAGCCAGGACCCAGGGAAGATGTCTAGGACAGGAAGGGCAGCAGGTAGGAGGGAGCTCAGGCCACTGCAACTCTGAGGAATGTCAGTTGAGGGGTTCTGCATCATTAGCCAATCAACCAGTA TCONS_00024568 s 5' 0 TCONS_00024568 s 5' 0 EMBV3_24699 GGAGGACACTCCTGCATAAACTAGTCAGCGAAAAGGTAGCACCCTAGTGACATCTACTGG Gene BVT0102_251879 + 0 NULL GK000008.2:51079320-51119868 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227605 TCONS_00227617 TCONS_00227606 TCONS_00227620 TCONS_00227613 TCONS_00227609 TCONS_00227616 TCONS_00227603 TCONS_00227610 TCONS_00227615 TCONS_00227621 TCONS_00227611 TCONS_00227612 TCONS_00227607 TCONS_00227614 TCONS_00227619 TCONS_00227608 TCONS_00227604 TCONS_00227618 1 XLOC_138282 Coding TCONS_00227607 XLOC_138282 Coding Coding TRPM6 8:51118385-51142427 j TSS169884 2800 1 TCONS_00227607_2 304 10 0.883948255064265 4.35372836121534e-13 4.95530713921914e-32 0.000633574583484533 4.44546372700549e-43 0.00299233584064208 0.000941263041602736 1.47287891067109e-13 0.000540690248707783 1.26223658109727e-16 0.0017820260741497 0.00357207282633731 0.00113123903511192 0.000200228903336284 0.00066775424425545 8.26383363718096e-08 0.0006881136927494 0.00162655256937111 1.21992531189452e-17 0.00140859087825723 0.000844982946959039 7.71958879455166e-25 8.8787177469416e-05 7.68582906287915e-66 2.78623365021505e-42 0.000650401650202013 0.000293799624762554 0.000740892803684246 0.000610855778872608 0.000635235790759713 2.20060067503515e-14 XM_005199185.1 TRPM6 PREDICTED: Bos taurus transient receptor potential cation channel, subfamily M, member 6 (TRPM6), transcript variant X1, mRNA. 0.0 4937 100.00 0.977142857142857 NM_001177310.1 TRPM6 Homo sapiens transient receptor potential cation channel, subfamily M, member 6 (TRPM6), transcript variant b, mRNA. 0.0 1606 80.16 0.615357142857143 TCONS_00227607_2 sp|Q9BX84|TRPM6_HUMAN TRPM6_HUMAN Transient receptor potential cation channel subfamily M member 6; 0.0 596 92.76 0.996710526315789 1 coding 0 0 0 0 1.02620301514402 0.0646935966276739 -0.0258754848646252 0.616390391167048 GTACTCTACAAAGGGGCCATTGATGTCAGGTTGAGAAGTTCAAATGGAGTTAACAAAATCTCAGACTCCTTAAAAAGCCCTCAAGAGCCTCACCATCATTATTCAGCCATTGAAAGGAACAATTTAATGAGGCTTTCTCAGACCATACCGTTTACACCAATCCAACTGTTTGCAGGAGAAGAAGTAACAGTCTACAGGCTGGAGGAGAGTTCTCCCTTGAATCTGGATAAAAGCATGTCTTCTTGGTCCCAGCGGGGGAGATCTGCTATGATCCAGGTGTTGTCCCAAGAGGAGATGGATGGTGGCCTTCGCAAAGCCATGAGAGTCATTAGCACCTGGTCTGAGGATGACATCCTCAAGCCAGGGCAGGTTTTCATTGTGAAGTCCTTTCTTCCTGAGGTTGTGCAGACATGGCACGAAATCTTCCAGGAGAGTACTGTGCTTCATCTTTGCCTTCGGGAAATTCAACAACAAAGAGCTGCTCAAAAACTGATCTATACCTTCAACCAAGTAAAACCACAAACCATTCCCTACACTCCAAGGTTCCTGGAAGTTTTCTTAATTTACTGCCATTCAGCCCAGCAGTGGTTGACCATCGAGAAGTATATGACGGGGGAGTTCCGGAAGTACAACAACAACAACGGTGATGAAATTGCCCCCAGCAACACCTTGGAGGAGCTGATGTTGGCTTTCTCTCACTGGACCTATGAGTATACTCGGGGAGAGCTGCTGGTTTTAGATTTGCAAGGTGTTGGAGAAAATTTGACGGATCCATCTGTAATAAAACCTGAAGACAAACAATCAAGAGGAATGGTGTTTGGACCAGCCAATTTAGGGGAAGATGCAATTAGAAACTTCATTGCAAAACATCGTTGCAACTCCTGCTGCCGGAAGCTCAAACTCCCGGACTTAAAAAGAAATGACTACTCTCCTGGAAGGATAAATTCTGCCTTTGGACTTGAAATCAAAATAGAACCAGCTGAGGAGACTCCAGCGGGGGAAGAGGGTAGTAATTCTCCAGAAGACCTCACACGATTATAAAAAAAAAAAAAAACACACCAAAAAACAGAAGTAAGAAGATGACAGCCTTTGCCCTGCCTTCCATGAACTCTATGGTAACATAGACTGGTGATATAACATTGATGATGTCAGAGCCTCTGCCAGAATGGCCTTACCCCAAGGGCCTTCTGGGACGTGCCTTCTGAGTCTCAGGTCTCTCTTGCCCAAGGACTTCCCTGTTGTTTGATGAATGGGTTTTCCTAGATATTGACCCCTGCAGGGTGCTTTGCATGTGCAGGGTTCATCATGCTCAAGTTGCACAGGAAGACATTTGGATGAATCAGCTGGGAAAGCGGCTCCTTCATACCTCATTCCTTGGTGCAGAATGCTGGGCACTTAAAGAACCAGGCAGATTAATTTATTTTCCCACTCTGTGTGCAGACTCTAACCTCCACTGCTATTCATCACCTAACCCCCATATTGTATGGATGTATATAGTTGTACATAAAAAAGTCACTTGACTTCCTCCTCTCTCCTTTCCAGCAGCATAGGGCTTTATATGGTGACAGAAAGGAAAACAATGGAGAGAAGGTGTATTTGCACAGACTGGAGGACACTCCTGCATAAACTAGTCAGCGAAAAGGTAGCATCCTAGTGACATCTACTGGGTTTGAGTATCATCAGTGGATCATATGATCACTGGGCATTTCAGGTTTCTCTAGAAGAGAGGAAAGGGAAACCTAAGACAAATGCCCTGGCATTTCTTTTTTTAAGGGAACAAGGTTATATAACACTAGCAATTATTAAGAAATGTTTTCCCTTCCCTTAAGCTCAGGGACACTATTGGTTAGAGAGTTGAGTAACCCAACCTCTTAATAATTATTCCCTTTTTCAAAGCTGGGTATATAATATTACAAGCTGAATTACTCTATGTCAGGTCATATAAGTAAAGATGGGGTTTCTGAATGAAAACATGCTTTGAAAATTTTGATTCATTGCAGTGCAGAGTTCTGGTGGCTTCAAGAGTGCTGGAGTGTATAGTTTAAGTATGGCCTGAGCACATGTGATCAGTTTCAGAAGCCTGAAGAAAGGGTCCCTGGGAGCCACACTGTACAACATGTTTGGGGGATCAGTCATCCCTCTTTCACACTTATCAAGGGTCACCCTACCTCAGAACAAGCACAAACTGTTCACCCAAGGAGGACTTGAAGGGCTGGGTACCTTCCCCCCCCTCTCCCCTCATCTCCTTTCCTCATTAAAAAGCATTCCAATCTATCAGCAACAAGCCTCCTGGGGCTTGAAATTTTCACCTTATCTTTACCATTAGCCCTTGCATTAGCTGGCTTCCTTTCAAATCAGTGCTCCTGTATTCTTAGGTTATACTCTGGGGATATGTTGCCCAAAGGTAGGGGGATGGAAAGCCAAGGATTTGGTTTGCCAAGGATAGTGCATGATTTTTGTGAGATGCATTATGACTGATTTACAGACCTTTTAATTTGGTCTTGGGGGTGGTGGGAGGTGGGAAATCTGGGTGATTTCTTGATTGGCAATGAGGATAAATTGTTAATGCTTTTTCAGAGCTTAACTGCCTTATCCTGTTCTGCAAATCGGTAAGAGATCTGTTGGTACTCACTTCAGAGACATGTTCAACTATGGAAAGAGGCAATTTTCCTATCCAAGGCCACACTAGAAAGCATTAATTCATTGGTCAAATATTTGTTACCTGGAATGGAACTTGAAAAAATACATTTTGATTTTTCTTTTCTGTGTTGTGGTTTTGTGTCTCTCTTTTTAAGAAAAT EMBV3_28399 TTGCTGGGATCCTCGGAATCATCTGCCTTGTCCTGATGTCCACTGTGGTAACAATGATCG Gene GeneID:100138144|LOC100138144:XM_002687805:24_cdna Constitutive 0 NULL GeneID:100138144 5 GENE LOC100138144 NULL similar to NKG2-A/NKG2-B type II integral membrane protein (NKG2-A/B-activating NK receptor) (NK cell receptor A) (CD159a antigen) EMBV3_35145 GATGCTTTCAGTAGCAGGAATGGCATTGCTGAAAAGTTGATGGCAGGTAAGCATTTGGGC Gene GeneID:513065|TAF13:NM_001075597:95_cdna UTR3_Alt 1 NULL GeneID:513065 3 GENE TAF13 MGC140447 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa EMBV3_32612 GCAGAGCACATCTCTAACCTGCCTTGGCCCCCTTGGACAAGAACTGGTTCTACAAGAATA Gene GeneID:505190|ODF3L1:NM_001075193:40_cdna Constitutive 0 NULL GeneID:505190 21 GENE ODF3L1 MGC137105 outer dense fiber of sperm tails 3-like 1 EMBV3_04373 TGTACATCCTCCACCTGGACCTGAAGCCTGAGAACATCCTGTGTGTGAATCGGGACACTA Gene GeneID:518025|MYLK4:XM_002697585:24_cdna Constitutive 0 NULL GeneID:518025 23 GENE MYLK4 NULL myosin light chain kinase family, member 4 EMBV3_42742 CCCTTTTCCATTCCCATTTTAACGTATTCCATGGCCACTCAGAGAAGAGCTAAGGCAATC Gene BVT0101_035927 + 0 NULL GK000007.2:17229544-17234892 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212117 TCONS_00212115 TCONS_00212118 TCONS_00212121 TCONS_00212114 TCONS_00212116 1 XLOC_130091 Coding TCONS_00212115 XLOC_130091 Coding Coding LOC522449 7:17202954-17234928 j TSS159247 5935 1 TCONS_00212115_4 402 0.257624262847515 7 0.81459356331905 6.45398768287185e-05 0.000152681921376671 6.47696011023448e-05 1.882226154031e-09 6.38271096282444e-05 1.28822454524964e-05 1.6380740855798e-05 2.86059389275779e-08 2.3700296627887e-05 0.000601192864964569 0.000174240463065826 0.000256523619123624 8.0082456664726e-05 0.000284815472892709 0.000104436763997836 0.00306930003113831 0.000109889356199496 0.0004367027482592 3.27786154386792e-06 9.53283578189e-06 3.45633739669662e-06 0.00214945938914559 0.000401315575687638 0.000826090260163507 5.49288462040933e-05 5.75920621165748e-06 0.000104581214956285 0.00044733968108611 0.000265153791496768 0.00011719855137933 XM_002701460.2 ZNF558 PREDICTED: Bos taurus zinc finger protein 558 (ZNF558), partial 0.0 6394 100.00 0.597135636057287 XM_005259755.1 ZNF558 PREDICTED: Homo sapiens zinc finger protein 558 (ZNF558), 0.0 1700 73.21 0.48390901432182 TCONS_00212115_4 sp|Q96NG5|ZN558_HUMAN ZN558_HUMAN Zinc finger protein 558; 0.0 719 86.07 0.997512437810945 8 coding GTCAATGAGAACAGGTGAACCTTGAGACTGGTTTCAACTCAGACTTGAACCCCAGCCCTAAGTGCACTGTGGGGACAAGAGGAGGGGCGTCCTGGTTCTCCAGCTCCCTGTTGCTGAGGAAAACGTCACTGTCTGAATTGCAGGATGGCGACCATGGTCCTGTCCCCGACTTGTGCTCAGTCGTCCCTGTACACAGCCCCTCACCAGAAAGGATACGCAGAGAAGGAAGGGTTGGCCCGTGGCTTCCTGACAGACTGGTTACAGGACTTGGTGACTTTTGAGGACGTGACCGTGGAGTTCACCCAGGAGGAGTGGGCACTGCTAGACTCTTCTCAGCGAAAACTGTATAGAGACGTGATGCTGGAGAACTGCAGGAACCTGGCATCGCTTGGATATCATGTTGATAAACCCAGTCTGATCTCTCAGTTGGAGCAAGAAGACAAGGTGGTGACAGAGGAAGGAGGAATTCTCCCAGGCACCCGTCCAGATTTGGAGACGGTACTTAAAGCAAAATGGTTAACTCCAAAGAAGCCTATTTTTAGAAAAGAACATTCTAATGATGTTAGAGCGGAGAGAAGTCATCTGGGAGTGAAACTCAATGAATGTAATCAGTGTTTTAAAGTCTTCAGCACAAAATCTAACCTTACTCAGCACAAAAGAATTCATACTGGAGAAAAACCCTATGACTGTAATCAGTGTGGAAAATCCTTCAGCAGTAGATCTTACCTTACTATTCATAAGAGAATACATAATGGGGAGAAACCCTATGAATGTAATGACTGTGGGAAAGCCTTCAATGATCCTTCCTCTCTTAGACTGCATGTGAGAATTCACACTGGAGAAAAACCCTATGAATGTAACCAGTGTTTTCATGTTTTCCGCACTAGTTGTAACCTCAAAAGCCACAAGAGAATTCATACGAGGGAGAATCACCATGAATGTAATCAGTGTGGCAAGGCCTTCAGCACGAGGTCCTCCCTTACTGGGCACAATAGTATTCATACAGGAGAGAAGCCTTATGAATGCAATGACTGTGGGAAAACCTTTAGGAAGAGCTCATATCTGACACAGCATATGAGAACTCATACTGGAGAAAAACCCTATGAGTGTAATCAGTGTGGAAAGTCCTTCAGCAGTAGCTTTTCTCTTACTGTTCACAAGAGGATTCATACTGGTGAGAAACCCTATGAATGCAGTAACTGCGGGAAAGCATTTAATAATCTCTCAGCTGTTAAGAAACATGTGAGAACTCACACTGGAGAAAAACCCTATGAATGTAATCATTGTGGAAAATCTTTCACCACTAATTCTTACCTTTCTGTGCACAAGAGAATACATAACAGGTGGATATGAATGCAGTAACTGATTTCTTATCTCTCAGACAACTTGTGACAACTCACAGTCTAGATGTATGAGTCAGCTGCTGCTGCATAACAAATTTCCCCTTGAAACATAGTGGCTTTAAACAGCAAACATATGTTATCTATAGATCAGGAATTCAGAACCAGCTTATCAATGTAGTTCTGGTCAGGATCTCATGAGGTTGCAATCAAGATGTCAGCAGGAGCTGCCATCCTCCACTTTATTGCCAAAGAGTCCACTTCCAAAATGGCTCACTGGCACACTTGGCAAGTTAGTCGCTGGTTGTTGGCAGGGAACCTTCATTTACTCACCGTGTTGGATTCTCTACAGGGTTAAATATCTTTATGATGTAGAAGCAGGGTCGTCCCAAAGCATTGGATTTAAAGAAGAGCTAATGCAGAAGCTACAGTGTCTTTTATGACCTTGACCCAGAAGGACATATCATCACTTCTTCAGTACTTTAAGGGTCACACAGATCACTCCTGATACATTGTGGGAAGAGACCATGCTCAATGTGAATATCAGGAAACAAAGATTGTTGGGAACCATCTGAGAAGTCACTGAAAGGGGGCCTTCAGGAGACCCTCTTTCTTTCAGTCAATTCAATATGAAGTAATATTCGGTAACTCCTGTGTAAATTCACTCATGAAAGAAACCTCATAAGTCCAAGCTTCATGATAAACTTTAAGCTCAAACTCACCCTAACGTACATAAAAGGTTATGTATTGGGGATAAATCTGAGGAATACAGTCGTGATATCTAGGGAGTCATGTGGCAGGGAAAATCTGATGAACATCATCAGAATGTAAAAGCCTTTAGGGACACTTGTCCCTTAAAATGTCCCTTAGAACATGTGAGAGGAATCACTACAGAGGAACACTCACGTAAGGAATGTGGAAAACCCTGTAGCACAAGCGTTTTTGTTAACAGAAGATGAAATTTCAAGTACCAAGTACGATGGGAAAGCCTTCAGGGTTCTTTCAGTTTTTAAGAGACATGAGGATCGATTCTGGAGAGAACAAACCATTGAATGGCATCAGTATTGGAAAGCCAGTTTCCCACATTCCTTAAACTTGTGAGTATAAAGAAGGAGGGAATGCCTTTAATGATAGCTCTTACTTTAGGAAAAGTATGAAATTCCTGGATGCAAAAACCTGTGAGTGGATTAATTTTGGAAAGTCTTTCGATGACTTCTGTCTTTGTTGAATTGTGTGAAGTCACCCAGGAGGGGCTTCGGGAAGGGAGCCCAAGAAGGTATTCAGCATGAGATTGCCTTAGCTCTTCTCTGAGTGGCCATGGAATACTTTAAAATGGGAATGGAAAAGGGTAAATGTTAAAAGTGTGGGATTACCTTTCAGTGTCTCATCCTTAGGGTGGGGCAACTAGTTCTTTAATTTTCAGTCTTTTTGATTAAGTAACAACATTTGTGTCTGCAGCTGTGCCCTAAAATAAACCTTAAGTTATGTTCTGTAGTTTTGTATGTAATACATTTATCATCATTGACTCTAAAACTATTAATACACTGCATATTCATAAAGATATTTCTGACTATTGCCTGAGTGATTTAGTTTATCCTAGGAAAAGCTAGGATAATTGCTAAACACCTTTTAGCAATTGCTAAATAGCTAAATTGCTATATACTTTTTCCTAATTTAATGGCATTTTTATTAAGTGGATTTTATTATGCTGATTCTTTTTTGTCTTTCCATCCTAGTATGGCAGTTATTTTTAGCCTCTTTCCCAATGTCCATTTCCCCCTATATTTTCTTAAAAGAAGAAGCAGATTTTTTTCTTTAAACTTTTTTTCAAGTTGTTGATGAATAGTATTGAAAATAGTCAATCCACAGGGCATCCCCAAAGCCCAGGGAGGTGTTCTGCTCTGCTGTCCATGAGAAGTAGGTGGAAGTCACAGAGGGGAGTGAGGGGGACACATCATTGTCTGGCTTGTCTGCCTCACCCATATCCTGTTCATCTTACCCATTCATTCTTGTGGAGTCAAGCTGTAGAGTTGGAAGAACTATATTTTGATCATGATGACAATGACCACAGTATGGCAAAAATCACAATGAGTGGGCTCCCTAAGAGGCTCTGATTGGCTCTATCACCTACAGGCTGCTTATTCCTAGACTTCTTACATGATTTATAAGTAACCTATGTGGTTGAGACTCAAGTGATTCTTTTTTGTTTGTTTTTGAGGTGGTGTTCTGTTAATGTCCTGCTGAATAATATTATTAGTTGGTCATTTTATAAATGCTCCAAGATTATTTGAAAACTGTGTGTGTGTGTGTGTATATGTGTGTGTGTGCTCAGTTGTGACTGACTCTTTTTGCGACCCCATGGACTGTAGCCCTCCAGGCTCCTTTGTCCATGGGATTTCCCAGGTAAGAATACTGGAGTGGGCTGTTCTTCCCTTCTCCAAGGGATGTTCCCTACCCAGGGATCAAAGTGGAGTCTTCTGTGTCTCCTGTCTTGCCAAGTGGATTCTTCACCAGTGAGCCACCTGTGTATTCTCTAATTTTCAGATATAGAGTGTATTCTCATTAACTCAAGCTAAACATGTTTTCAGATATATTAATAGTATGTACCTGAAGCTTTTCCCCCTCTCTCTTAAACATAATTACCAATAGATGTGAATTAAAGTTCTCTACCATGGTTGTGGATTAACAAATTCATTTTGGTAATTCTGTCATTTCTTTCTTTATGTATTTTAATGTAATGTAAATAAAGTACATGCATTTCTGAGGTGGTTGATCAGAAACTGAAGAGGAACTGAAGAGCCTTTTGATGAGGGTGAAAGAGATGAGTTTAAAACTCAGCATTAAAAAAACTAAGATCATGACCTCCAGTCTCATCACTTCATGGCAAATAGAGGGGAAAAAGTGTAAGCAGTGGCAGATCTTATTGGGCTCCAAAACCACCGTGGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTGCCTCTTGGAAGAAAAGCTATGACAAACATAGACAGCATATTAAAAAGAGACGTGGCTCTGAAAGAAAAAAAGGTCCATATAGTCAAAGCTATCGTTTTTCCAGTAGTCATGTAAGGATGTGAGAGTTGGACCAGAAAGAAGTCTGAGTGCCAAAGAATTGATGCTTTTGAATCGTGGTGCTGGAGAAGACTCTTGGGAGTCCCTTGGACAGCAAGGAGATCCAACCAGTGAATCCTAAAGGAAATCAATCCTGAATATTCATTGGAAGGATTGATGCTGAAGCTCCAATACTTTGGTCACCTGATGCAAAGAGCAGACTCACTGGAGAAGACCCTGATGCTAGGAAAAATCAAAGGCAAAAAGAGAAGGGAGGTGCAGAGGATGAAATGGTTGGATGGCATCACGGCTCAATGGACCTATGAATTTGAACAAACTCCAGAAGATGGTGACGGACAGGGAAGCCTAATATGCTGCAGTCCATGGGATCCCAAAAACTCAGACATAGCAACTGAACAACAGAGAAAAAGAAAAACTAAAGCATTGAGAGGAAATAAAATTCCTCATTAAATAGAGAATACCATCTTTATCCATGGTTAAAACATTTTAATGAGCTCATTTTCTTTAAGACAAATAACTCAGTATGATATAGATAGAAACATGGTATAATTTTTAGAAATTAGAGATGCTGATTCTCAGATTCACAAGGAAAGGAATTTATTCAAAGAGAAATAACTTTTATGGGGGGATAAAATGAGAGAGGATGTGGGAAAAAGTAACATACCAAAATATTTCTCAGAAGTTCATTATTGGAGGAAAAAACTGGACAAACTGAAAATGTAGAGACTCCAGAAAAAGCCCATATTTATTTGGAAACTCAGAAGTTAAGATTAAGTTTCTATTTTAAGTAAATTGCAAAATTATGATTTGAGTGAAGAAAATATACTACCAGTAATTTAAAAAATTTAATTTTTTAATTGAAGGATAATTGCTTTACAGGATTTTGTTGTTTTCTGTCAAACATCAACATGAATCCACCATAGCTACCAGTATTTTTCACTGGCTACTTTCTGCATTCAGAAAAAAATTATTTTTCAGTTAAAATTTTATTTTCAATAAAAATCTCTGAATGAATTGCACTAATGTGTGAAAAGCATGTATACCTTCAGTATTTTCTCCTAATAGGAATCTTTCCTCTTGTCAGACACAATACAGTAAAGGCTGGCCCAAAATGTTTTTACAGAGAAAATGAACTTTCTGGATACAGGAATGGAAGAAACAATAAGGATGTACTTACTGTATACTTAATGACGGAGGACCCAGCTAGATTCAGTAGCAGGAGCTTTGAGGAGCCGTTAATCTGAGATAGAACATCTATCCATAACTCTAAATGACTGAGACTTTTAAAAAGAGAAAACAGATCCTCTGCAAAATAGCTGTAAAGCAATTCTGATGCTGTTATTGGAATGAATACGAAATACCTATCTGGTATACTGCTAATGGCAGCTTGCTGCTCTCTATTATTGGAATGAATAGTATCTATCTGGTATACTATTCAAAAGCCAAGTGTAATAGCAACTTACTATGAGATAAAACCTGAATGCAGATTTCTCTTAGA EMBV3_02509 GAGCCGCACCCTTGCTTTGGCAGATCGTCTTTTCCAACAACTCTGCCAGGGTGATTTAAT Gene BVT0102_110136 + 0 NULL GK000024.2:5459492-5614222 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11322 AGCCCAAGACCATCACAGACGAGTTCGAGCAGGGCACCTACATCTACTTTGACTACGAGA Gene GeneID:527305|CNOT3:XM_002695432:43_cdna Constitutive 0 NULL GeneID:527305 18 GENE CNOT3 NULL CCR4-NOT transcription complex, subunit 3 EMBV3_32676 ACCTGCTGTCCTGAAGTGGATAAAGGAGCAAATCTCTGACTGGAGGAGCTGCACGATAGT Gene GeneID:504248|PRPS1L1:NM_001102483:14_cdna Constitutive 0 NULL GeneID:504248 4 GENE PRPS1L1 MGC152391 phosphoribosyl pyrophosphate synthetase 1-like 1 EMBV3_02926 CGCTTTGCTCGAGGAGCCGTGAAGAGATACCCCATGTCCAACGTAACAGAAACCCAAGTA Gene BVT0102_055418 + 0 NULL GK000011.2:5261286-5422961 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123096 TCONS_00224139 TCONS_00080305 TCONS_00239607 TCONS_00023834 TCONS_00023833 TCONS_00023836 TCONS_00188741 TCONS_00023835 6 XLOC_074650 XLOC_137435 XLOC_049189 XLOC_146273 XLOC_014370 XLOC_114782 Coding TCONS_00023836 XLOC_014370 Coding Coding - 11:5352165-5355112 - TSS17640 1172 2 TCONS_00023836_4 106 1.02133105802048 2 0.602851323828921 0.000396180647564659 2.55080103617368e-09 0.000144300113250678 0.00122979057582304 0.000478839328292491 0.000469635738117829 0.000309160356827503 0.000130936014912011 0.000952931651863902 0.000637539865760018 0 0 1.90023257093101e-10 2.88759329322656e-07 3.21147090152036e-05 0.00158470942086496 2.35630330034828e-136 0.00158056162942109 0.000900899300129383 0.00059666238659344 0.000967048532661993 2.32465592478886e-05 0.00233104362188011 0.00159805857842879 0.00156373508043891 0.000143614556580796 0.000215300235049572 6.67494580697803e-05 2.26942935030809e-05 0.000960695416293786 XR_229055.1 LOC101903110 PREDICTED: Bos taurus uncharacterized LOC101903110 (LOC101903110), 1e-115 421 82.95 0.363481228668942 TCONS_00023836_4 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 2e-10 58.5 52.54 0.518867924528302 0 noncoding GTGCCATTGCCTTCTCCTGGACCACTGCAGAAGGGGATGGGAAACCACTTCAGTATTCTTTCCTTGAGAACCCCATGAACAGTATGAAAAGGAAAAAGATAGGACGCTGAAAGATGAACTCGCAGATCAGTAGGTGCCCAATATGCTCCTGGAGATCAATGCAGAACTAACTCCAGAAAGAATAAAGAGACGGAGCCAAAGCAAAAACATCAGCTGTGGATGTGACTGGTGATGGAAGGAAAGTCCAGTGCTATAAAGAGCAATACTGCATAGGAACCTGGAATTTTATGTACACGAATCAAGGCAAATTGGAGCAGCGAGAGGCCAACAGGAGATACGCCACGTCCAAGATCTGGAGGGGCGGCCAAGAGGAGATACGCCATGTCCACGGTCAGGAGGGGTGGCCAAGAGGAGGTATGCCATGTCCAAGTTCAGGAGCGGAGCCCGAGAGGAGATATGCCACGTCCAAGGTGAGGAGCAGAGGCCGTGAGGAGATACCTCACATCCAAAGTAAGGAGCAGGACGGCGCTCTGCTCGAGGAGCCGTGAAGAGATACCCCACGTCCAACGTAACAGAAACCCAAGTAAGAAGGTAAGAGCTCAGAGAGGGCATCAGAGCACAGACAGACTGAAACCACGGTCACAGCAAAGTCAGCCAATCTGACCACATGGACCACAGCCTTGTCTAACGCGATGAATAAGCCATGCCATCTAGAGCCACCCAAAACAGACAGGTTGTGGTGGAGAGGTCTCACAAGCTGTGTCCACTGGAGAGGTATATGGCAAACTTCTTCAGTATTCTTGCCTTGAGACCCCAGGAACAGCATGAAAAGGAAAAAGATACGACACTGAAAGATGAACTCCCCAGGTTCAGTAGGTGCCCAATATGCTACTGGAGATCAGTGGAGAACTAACTCCAGAAAGAATGAAGAGACGAAGCCAAAGCAAAAACAACACCCAGCTGTGGATGTGACTGGTGATGGAAGTAAAGTTCAGTGCTGGAAAGAGCAATTCTGCATAGGTACCTGGCATGTTAGGATGACAATCAAGGCAAATTGGAGCAGTGAGAGGCCAACAGGAGATACGCCATGTCCAAGATCTGGAGGGGCGGCCAAGAGGAGATACGCCATGTCCACGATGAGGAGGGGTGGCCAAGAGGAGGTATGCCATGTC TCONS_00026765 TCONS_00026766 TCONS_00026767 TCONS_00026768 TCONS_00026769 TCONS_00026770 TCONS_00026771 TCONS_00026772 TCONS_00026773 TCONS_00026774 TCONS_00026775 TCONS_00026776 TCONS_00026777 r 3' 74053 TCONS_00026765 TCONS_00026766 TCONS_00026767 TCONS_00026768 TCONS_00026769 TCONS_00026770 TCONS_00026771 TCONS_00026772 TCONS_00026773 TCONS_00026774 TCONS_00026775 TCONS_00026776 TCONS_00026777 r 3' 76999 EMBV3_01921 CACTTTCTGGGCTTTTAGAATGGGAATGCAAAACTGATGCAGTAGAAGCCCTCACAGCAC Gene GeneID:534315|HNRPLL:NM_001076900:143_cdna UTR3_Alt 2 NULL GeneID:534315 11 GENE HNRPLL MGC139688 heterogeneous nuclear ribonucleoprotein L-like EMBV3_02016 GCGATGGAGCTGCCAGCCGTGAACCTGAAGTTTCTGGGTGGCTTGGTGGCTACCATCTTC Variant GeneID:508521|AGTRAP:NM_001075363:49_cdna 78^218 3 EMBV3_32613 GeneID:508521 16 GENE AGTRAP MGC140564 angiotensin II receptor-associated protein EMBV3_24929 ATAATGCTTTCAGAATTTACTTTCAGAAAATGTTTTAGGGTAAATGCATAAGACTATGCA Gene GeneID:404141|INGX:XM_002698650:96_cdna Constitutive 1 NULL GeneID:404141 27 GENE INGX INGX inhibitor of growth family, X-linked, pseudogene EMBV3_35634 CACACCAGGCTCCCCTGGGTCCTTCACTATCTCTGGGAGTTCACTCAAATTCCTATCCAT Gene BVV0102_006461 + 0 NULL GK000005.2:98730130-98915915 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38712 TCTTTCCAGCGCTGCGCTCGGACGGACAAGGACTGAAGAGGGTCACGGGCGGCTTCAACT Variant GeneID:515808|PUS1:XM_002694454:56_cdna 883^985 1 EMBV3_06294 GeneID:515808 17 GENE PUS1 NULL pseudouridylate synthase 1 EMBV3_25053 AAGCCAGGACCTTATGATCAGCCTCTTGTGAACACCCTTCAGCGCCGCAAAGAGAAGCGA Gene GeneID:523498|MTSS1:XM_002692623:70_cdna UTR3_Alt 2 NULL GeneID:523498 14 GENE MTSS1 NULL metastasis suppressor 1 EMBV3_05730 CAAAAGCTTCAGCCAGAAATCCGTGCTCACCACCCACCAAAGAATCCACCTCGGAGGCAA Gene GeneID:541023|ZNF202:XM_002693090:446_cdna Constitutive 0 NULL GeneID:541023 15 GENE ZNF202 NULL zinc finger protein 202 EMBV3_35483 CCAATTTCCTCAAGCAATTTACCACGTTTAGGGGCAGGAGATGGATCTGCATGGTTCTGA Gene BVT0102_199810 - 1 EMBV3_38786 GK000023.2:3149295-3171446 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14016 AGTCGGCCCGCGCCCCGCTAGGGTTCAGACCCGGGGCAGGTGGTGGCGCCGCGAAGATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37968 ATATAAACCTGCATTTTTGTCCAGCTCTTCCTCAGGGGATGGTCTCTCTGAAGTCCCCGC Gene GeneID:523815|CBFA2T3:XM_002694861:818_cdna Constitutive 0 NULL GeneID:523815 18 GENE CBFA2T3 NULL core-binding factor, runt domain, alpha subunit 2; translocated to, 3 EMBV3_22778 GCCCACGGCCTGAAGGGGCACATCATCTCGAGCCCCTGAGGGCAAGACTGTGGAAGTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20819 TGTCACTGGGAGTTGTACCCACACCTCAGGGTCCCCCAACTACAGATACCCTAATGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40558 GCTGTTTGTAACATCAACAGACATGCGGCTGGGAACATCTTGCTGCTGACAGAAATCGGC Gene GeneID:281148|ETS2:NM_001080214:6_cdna Constitutive 0 NULL GeneID:281148 1 GENE ETS2 MGC151916 v-ets erythroblastosis virus E26 oncogene homolog 2 (avian) EMBV3_40712 CAGGAGGAAGTACTGGAGAAGTGCTCCATGTGACATTTCAGGGGGCAAACCCCTGGAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35400 CGGACCTTAGAGAGACCTACTCCCAGCTCGGGACAGACCCTGAAGAGGCCATCCTGAGCG Variant GeneID:508257|MYL7:XM_002686892:107_cdna 374^478 2 EMBV3_15391 GeneID:508257 4 GENE MYL7 NULL myosin, light chain 7, regulatory EMBV3_14445 TCTGCAAATGCTTACTTTGCCTGAGGTAATTTAGAGGAGGAGAGAATGTCATCGCTCAAG Gene GeneID:540808|FCHO2:NM_001098119:154_cdna UTR3_Alt 2 NULL GeneID:540808 20 GENE FCHO2 NULL FCH domain only 2 EMBV3_17189 AGACAGTGGGTTAGGAAGATGCTCTTGTGAACTGACATAACTTCCTCAGGGGCAGGGTGG Gene BVT0102_253176 - 0 NULL GK000022.2:49937193-49940991 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128901 TCONS_00127110 TCONS_00127113 TCONS_00127118 TCONS_00128902 TCONS_00127111 TCONS_00127112 TCONS_00127116 TCONS_00127117 TCONS_00127114 2 XLOC_077970 XLOC_077572 Coding TCONS_00127113 XLOC_077572 Coding Coding VPRBP 22:49841392-49940777 j TSS95152 9307 1 TCONS_00127113_8 1221 0.0367465348662297 24 0.906594622876922 0.00186645026768276 0.00274724616287013 0.00185386228707573 0.00200000776641486 0.000900801690831616 0.00143165901263052 0.00119744410834251 0.0010569016680969 0.00268538504530555 0.000176504400652265 0.00018574722203329 8.68867797793624e-05 0.000320959885110157 0.00197512619061386 0.000719297523809631 1.15371604258844e-146 2.18302756318203e-08 8.40597390641872e-130 0.00153580725635157 0.00163552252321983 0.000488456186867701 2.16506053846019e-14 0.000360828115385016 9.11711172246494e-140 0.00140987871493044 0.000951444981467377 0.000687242435828361 8.76483797171165e-05 7.06153940132511e-08 0.000214267005968891 XM_005196471.1 VPRBP PREDICTED: Bos taurus Vpr (HIV-1) binding protein (VPRBP), 0.0 1.051e+04 99.17 0.631460191253895 XR_254197.1 VPRBP PREDICTED: Homo sapiens Vpr (HIV-1) binding protein (VPRBP), 0.0 7553 90.03 0.590200924035672 TCONS_00127113_8 sp|Q9Y4B6|VPRBP_HUMAN VPRBP_HUMAN Protein VPRBP; 0.0 2458 97.68 0.987714987714988 0 coding 1 1 0 0 -1.12980945360219 0.0145371531817094 -0.784375394544281 0.000367801632658418 GTCTGCTTAGCGAGGGTTGCTGTTTGTTCCCTCACCATCCTGGCAAGAGCAAGTGTCTGCTCTTTGCCCTGAGGCCCCACCCACAAAGGCAGGTAGAGCAGCCTCTGTTCTCAGCCACCATGTAGTTGCCTTTCTCTGGAACAAGCACCGCAGCATCTTTACTCCACTCTCCTGAATTTGTGGTCCTCCTGAGAGCAGCCAAGGACATGATGCTTCTCAGAGATTCTTTGGAACAAAAGCGCCTGGAATCTAGGCCTCTACTGGCCTGTGGCGTGGAGAGCCCACCTTGCCCACGTCCCCTCTGCTCTGCATTTTAGGGGAAGAGAAATGGGGAAGACAGGGTTTGTCCCCAACTCAGGCTGCCCTGGGCCTTTCCTAGCTCTCAGGTGAGACTATCAGCCCCATGAAATCGGATATATTCTGTATTTAAAAAAAAAAAAAAAGACAATTCTGGAAGCTACAAGGGTGTCGGAGAGAGTAAAGCAAAGCTTGAAGGAAGAGAGTCTCCTGTTTGCTGCCTACTGACCTCAGCTACAGAAAGGTGCCTGGTGTGTTCCTGACTTAGGACTCCTATGTGGGCTTTGTGCCACAGAGGGTTGGATGCTGACTTTAGAGCCTGCAATGGAGAAGCAAAGTTCGCAGAAGGTCAGGTCAAGCCATGACTACAGTAGCGGTCCATGTGGACTCCAAAGCTGAGCTCACTACCCTGTTGGAGCAGTGGGAAAAGGAACATGGCAGTGGGCAGGACATGGTACCCATCCTTACCAGGATGTCTGAATTGATTGAAAAAGAAACTGAAGAATATCGTAAGGGGGATCCAGACCCATTTGATGATCGGCATCCTGGTCGAGCTGATCCAGAGTGTATGCTGGGCCATTTGCTGAGAATACTCTTCAAGAATGATGATTTCATGAATGCACTGGTGAATGCATATGTGATGACAAGCCGAGAGCCCCCTTTAAACACTGCAGCTTGCAGACTCCTACTGGACATCATGCCCGGGCTGGAAACTGCTGTTGTCTTTCAAGAAAAGGAAGGAATTGTTGAGAACCTTTTCAAATGGGCCCGAGAGGCTGATCAGCCACTGAGGACATATTCTACTGGTCTGTTAGGTGGTGCTATGGAGAATCAAGACATCGCTGCTAACTACAGGGATGAGAACTCACAGCTGGTGGCAATAGTGCTTCGAAGATTGAGGGAGCTGCAGCTTCAGGAAGTAGGTTCAAGGCAAGAAAGCAAGCGTCCTAGCCCACGAAAGCTCTCCTCTGAACCCCTTTTGCCTCTGGATGAAGAAGCTGTGGATATGGACTATGGCGACATGGCTGTAGATGTAGTAGATGGCGAACAAGAGGAAGCTTCTGGAGACATGGAGATCTCCTTTCATCTTGAGTCAGGCCACAAGACCAGTAGCAGAGTGAACTCAGCAACGAAACTTGAAGAAGGGGCATTGAGGAAAAACAAGTCAACAAAACAGGCTGACAGAGAGAGCTTCAGGAAAGCCAAGCAAAAGTTGGGTTTTTCATCATCTGATCCAGACCGCATGTTTGTTGAATTGTCTAATAGCAGCTGGTCAGAAATGTCCCCCTGGGTGATTGGCACCAATTATACCCTTTATCCTATGACTCCTGCTATTGAGCAGCGACTTATTCTCCAGTATTTGACCCCTTTAGGAGAATATCAGGAGTTACTTCCCATATTCATGCAGCTTGGATCACGGGAGTTGATGATGTTCTACATTGACTTAAAACAAACTAATGATGTCCTGCTTACATTTGAGGCGCTCAAGCACCTAGCATCTCTCCTGCTCCACAATAAGTTTGCCACAGAATTTGTTGCGCACGGTGGAGTACAGAAATTACTGGAAATTCCTCGTCCTTCTATGGCTGCAACTGGTGTATCCATGTGCTTGTATTACCTGTCCTACAACCAGGATGCCATGGAAAGAGTTTGCATGCATCCCCACAATGTTCTGTCTGATGTGGTGAACTACACCCTGTGGCTAATGGAATGTTCACATGCCTCAGGATGCTGCCATGCTACCATGTTTTTCTCAATCTGCTTCTCCTTCCGGGCTGTGTTGGAACTCTTTGACCGCTACGATGGTCTTCGTCGTCTGGTGAACTTGATCAGTACTTTGGAGATTCTAAATTTGGAAGATCAGGGTGCACTTCTGAGTGATGATGAAATATTCGCTAGCCGGCAGACTGGTAAACACACCTGCATGGCCTTGCGCAAGTACTTTGAAGCTCACCTGGCCATTAAATTGGAACAAGTGAAGCAGTCTCTTCAGAGGACTGAAGGTGGCATTCTTGTTCATCCTCAACCTCCCTACAAGGCATGTTCATATACTCATGAACAGATTGTGGAAATGATGGAGTTTCTGATAGAATATGGCCCAGCGCAGCTGTATTGGGAGCCAGCTGAAGTCTTCCTCAAGCTGTCTTGTGTCCAGCTCTTATTGCAACTTATTTCTATTGCTTGCAATTGGAAGACCTATTATGCAAGGAATGACACTGTGCGCTTTGCTCTGGATGTCCTGGCTATTCTCACTGTTGTGCCAAAAATTCAGCTCCAGTTGGCAGAATCAGTGGATGTACTAGATGAGGCTGGCTCCACCGTCTCCACTGTAGGTATCAGCATTATTTTGGGAGTGGCTGAGGGTGAGTTCTTTATTCACGATGCTGAAATTCAGAAGTCAGCACTTCAGATTATCATCAATTGTGTTTGTGGCCCGGATAACAGAATTTCTAGTATTGGCAAGTTTATCTCTGGAACGCCTCGGAGGAAGCTGCCTCAGACGCCCAAAAGCAGTGAGCACACTCTGGCCAAGATGTGGAACGTGGTGCAGTCCAACAACGGCATCAAGGTGCTTCTGTCCTTACTGTCTGTCAAGATGCCCATCACAGATGCAGACCAGATCCGGGCCCTAGCCTGCAAGGCCCTGGTGGGCCTGTCTCGCAGTAGCACCGTGCGGCAGATCATCAGCAAACTGCCCCTTTTCAGCAGCTGCCAGATCCAGCAGCTGATGAAAGAGCCTGTGCTTCAGGACAAGCGTAGTGACCACGTCAAGTTCTGCAAGTACGCCGCTGAGCTCATCGAACGGGTGTCGGGAAAGCCGCTTCTTATCGGCACCGATGTGTCCCTGGCACGTCTGCAGAAAGCTGACGTTGTTGCCCAGTCACGGATCTCCTTTCCTGAGAAAGAGCTGCTTCTACTGATCCGAAACCATCTCATTTCTAAAGGCCTTGGGGAGACAGCCACTGTGCTGACTAAAGAGGCCGACCTGCCCATGACTGCTGCCTCCCATTCTTCGGCCTTCACCCCGGTCACTGCTGCTGCTTCTCCTGTTTCTCTTCCCCGCACCCCTCGCATCGCCAATGGCATTGCAACTCGATTGGGTAGCCATGCTGCTGTGGGTACCTCTGCCCCTTCTGCCCCCGCTGCTCATCCTCAGCCGCGGGTGCCCCAGGGTTCACTAGCTCTGCCTGGTCCATCTCATGCAGGAAACTCCCCTGTGATTGGTAGGATCAGTTTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGAAGTCGGACCATGGCGCCTACAGCCAGAGCCCAGCCATAAAAAAGCAGCTGGACAGACACCTTCCCTCCCCGCCTACGCTGGACAGTATCATCACAGAATATCTTAGAGAGCAGCATGCTCGCTGCAAGAACCCAGTTGCCACCTGCCCACCCTTCTCTCTCTTTACTCCTCACCAGTGTCCTGAGCCAAAACAGAGGCGACAAGCGCCAATAAACTTTACCTCAAGGCTAAACCGCAGGGCATCATTTCCAAAGTATGGAGGGGTAGATGGCGGGTGCTTTGATAGGCACCTTATCTTTAGCAGGTTCCGTCCTATTTCAGTGTTCCGGGAAGCCAACGAGGATGAGAGTGGCCTCACCTGCTGTGCGTTCTCCGCACGAGAGCGCTTCCTGATGCTGGGCACCTGCACCGGGCAGTTGAAGCTCTACAACGTGTTCAGTGGACAGGAGGAGGCCAGCTACAACTGTCACAACTCAGCCATCACACACCTGGAGCCCTCCAGGGATGGATCCTTGCTGCTGACATCAGCTACCTGGAGCCAGCCTCTGTCTGCACTGTGGGGAATGAAATCAGTATTTGATATGAAGCATTCCTTTACAGAAGATCATTATGTTGAGTTCAGTAAGCATTCTCAGGACCGGGTCATAGGCACGAAGGGAGACATCGCCCATATCTTGCCAACAACTACAAGAGGAACTGCGCCACCTTTAATCCTACAGACGATCTTGTCTTAAATGATGGCGTCCTGTGGGATGTCCGCTCTGCACAGGCCATCCACAAGTTCGACAAGTTCAACATGAACATCAGTGGCGTCTTCCATCCGAACGGGCTGGAGGTCATCATTAATACTGAGATTTGGGACCTTCGAACCTTCCATCTTTTACACACAGTTCCTGCTCTCGATCAGTGTCGCGTGGTGTTCAACCACACGGGGACAGTGATGTATGGAGCTATGTTGCAGGCAGATGATGAAGATGACCTATTGGAAGAGAGGATGAAAAGCCCTTTTGGATCATCCTTCCGAACATTTAATGCGACTGACTACAAACCTATAGCAACAATTGACGTGAAAAGGAACATTTTTGACCTGTGTACAGACACCAAAGACTGCTATCTTGCTGTCATCGAGAACCAAGGCAGTATGGACGCGCTGAACATGGACACCGTGTGCAGGCTGTATGAAGTGGGCAGGCAGCGTCTGGCGGAGGACGAGGACGAGGAGGAGGACCAGGAAGAGGAAGAGCAGGAGGAAGAAGACGACGACGAAGACGACGACGACACTGATGATCTGGACGAGCTGGACACTGACCAGCTGCTGGAGGCAGAGCTCGAGGAGGACGACAACAACGAGAACGCGGGGGAGGATGGGGACAATGACTTCTCGCCCTCTGACGAGGAGCTGGCGAACCTCCTGGAGGAGGGGGAGGACGCGGAGGACGAAGACTCAGATGCAGACGAGGAAGTGGAACTGATCCTGGGGGACACCGACAGCTCTGACAACTCTGATTTGGAAGATGACATCATCTTATCTCTAAATGAGTGAGGAGTCAGCACGACGTGGAAGATTCTTGGCAGGAGAGAAACCGAGTCAGATTAATTCAGAACATCTTCCGTTCCCTTTCTCCCAGGGCTCTCTTAAGGAACTGCATGCCCTGGCCCTGCATTCAGAGAATTATGGTTTAGAGTCTCACTGGAATCTGAGAGTCCTTCTAAGAACAGTAACAACCACAAAAAGACAACAGGGGTTAGGCCCTGCTCTGCTTTCCCTTCTCCTAGGATGGACGTATCTTTCCTCAAGGGAAAAAAAAAAAACAAACATGTCTCTGGGGTTATTTCACAATATATTTTCTTTGTATAATGTTCTTTACTTAAAGAACAAGAAATAGTTTTTTATAAAACTTTAAAAAGAAAAAAAAAAAGGCATTTATAACTGAGGGTATGAACTTATATCCACCAGGTCTGTCCCTGCACTTCATTTTCTATGAAAGAAAATGATGTCTAAAGAACAATAGAGAGGCATTTTTACACACATATTTAAATGAAAAGGAAAATCGTGGTTTCTTAAATTGATAAGGATTAAGAATATTTTATTATAAATATAATATATGATTTTTTAACCTGTTTTGTTGCCTCATATGCCGCCAGGTTAATCTGTTTTCCTTCGTGCCAGAGGTGGGGAGAGGCGCTGCCTGTTCGCTGAGTAAATGCCTAGGTTCACCAGCCTTCACGGCTTGGGGGCAGCAAGGTCATTGTGGATATTGGTTTTGTGGAGTTGAGGGAGCTTAGGATATAAGTTCACTCCCTCTATTTTTCTTTGTGATTCAGTTTTTCAAAAATCTTTTTTTCTTCCTTTCTCCCCAATGTGGAAATTACAAATCAAAGGCCTTTTTTCTTTAATGTAAAGTGTATTTATTTAAAAAAAAAATACAGAATAAAACTACAAGTCTGTCTTTGCTTGTTTGTGGCCTTTCCCTGTTCTCTTTTACTGAAGTGGGGTGGGGTCCCTTACCTTGCAGCTCTAGCCCAGGCAACATACAAGATGCCTCCCCGAGAGGCAGCCCAAGATGGGGTGAGCGCACGCTCTGCCCAAAGCACTCTGGGGAGAGAAGCAGCCTTGTCAGCACCAAGCCCTGGTCTGCTGGCACGGGGCAGAGGGGGTCCTCAAGGCACCACCCACCATGTGCCACCCCTCTGCCCCCGCCGTGTGTCCTGGGCTCTGAAGCAAGATCCCGATTCCGGTGTGGGGGAGCCGGAGTGTTAGGGGCCCACCTGGGATGCTGTGAGCCACGAGCTGACGGGCCTAAGGAATGGAAGCCTGGTGGCCATCACTGTTACTGTTTTCTTAAAGGAGTACCAGCAGAGACCCTGGCAGTTTGGGGGCAGCTGAGGCTGGGTTAGCAGGTATTCACTGGCTTCACAGCTGGCCTTGTGGTTAAACTGTTCCCACCAAGTAAAGCACCAAACGCTCTTAACCTGTTAACTTACCCGCCTCATCCCCTTCTTTCCCACAAGTAGGAGACCCTACTCTCTCCCCCCGAGTTTACCCAGTTTCTGTTGTAGGCATTTGTTAAGAGATTTTTCTCCGTTTGCTGAGATAAGAGGACAAATCTGTGAAGTAAACAAGACGAGACGGCTAAACCTCACTGGGGGCCGGTAAAGAAATCCCCGCTGGGCTTCGGAACACCACAGAGCGCTCACACACCGAAGCGGGCCTGTGTCGCCAGGCACCTTGTGATCCTCTGGAGGGCAGAGGGCTCGGCTCGTAAACTGCTTCATGCCTCAGCTGAAATGGATTGCTGACACCTAACCGGTAGACTGGTCTGACTGATGGTGCATTACAGGAAAAAAGGCTAAAAGTCAAGAAGCACTAGAAGCACTGTTATTCTAGTCATTAACTCAGCCGAGCCCCGGTCTCCCTGAACTCCGCCAGCAGCCCTCGGGAGCACCCACCCACAGGTCTCTTGGGTGGAGACGGGGGCCTGCAGTAAGAAAGCAGGATCCTGGTCGACCTGACAACACACCCTTAGGGAAATGCCCCGGGGAGGCAAAGAAACATCAGCCCTCCTCTTTATCTGCCAAGGCCGAAGATCTCAGTCCCTTAGGAAGAAACATGCAGAACGTACCAAACCACCAATGAGGCAAATTTCATCTCCTCTTGGTTTTTGCCTTTAAGCCACACCTCAGGTAGGAACCCCAGGTGGAGGCACTGGTTGCCTGCAGTTAAATCGTTCTCCCTGTGGGGGAAGCATCCTAAATCCGTGGGGATGGCGGAGGGAGGGGATATACACACACATACACACTTATGACTGATTCGTTCTGCTGCATGGCAGAAGCCAGCACAACACTGTAAAGCAATTATCCTCCCATTTTAAAAGACAAAAGCGGAAGGAAGGAAAGAGTTGAGAGTCTGAGGCAGAGAATAATCACAATGCAGGAAAACTCTAGTTCAGTTTGGGGCCAGAGAGCACCTATGCCTGAAAAAGGGCGAACAAGGCACGGGTTCACGTGTCCTCTCCAACCAGACTTCATAGCAGTTTTCTGTTTGGGGAAAGCCAGGTAGTGCTCTGGGTCCTGACCACCTGCTCTACGAAAGAACAGCCCAAAGACAGGGCAGCAAAGCGGCTCCGGCCTATGATCTGGGCTTTTGTCCAGACTTCACCTGCTTTAACCCTGAAGACTTGGTGGTAAAGAACGCTCCTACCAGTACAGGAGATCCCTGGGTCGGGAAGATCCCCCAGAGGATGGTATGGCTACCCATTCCAGTATTCTTGCCTGGGAAGTCCCAGGGACAGACGAGCCTGGCAGGCTACAGTCCATGGGGTTGCACAGAGTCGGACACGACTAACGCCACCGCCTGTTCTAGGCATGATGAGGCCACTCCGGCTTCCAGTGCTTCCCACTGCCTGTCTGCATCCCACACTGCTTTGCTCAGATACCTGGCAGAAGTGGCTGAAACTCAAGTATAAACACACATTCAACACTTCCTGTGTTTCAGATTATGAACGCGCTTGTTCATTAGCAACAGCTGAAGCCCAGGGAGCAGTACTTCCCCAGGCACCTTCCTTCCCGTTTAAATCTCTAAGGTCTCAAAAAGTCACCTCTTTCACTGTTCTTGTGGAGAGGCCTGTATTCTCCGTGAGGTCCGCAGTAAGCCCCAGCCTCCATCTCACAAACTTGCTCTCAAAACATCTCCGCTGTCACCTGCGCTGTCTCGCGGCAGTCAGGGTAGTGATCAAACCTAGAGGGGACAGCACGTCAACAGACCCCGCGGTTCTGGTCTCCTGGGGGCTCATTTCCCTTCCTGGAGCGCCTCTGCTCCGTCAGCCTTGACAGTGAAGCTTTCAGACCATCTAGACTGCCACAAACATTTCAACAAAGTGGGCTGTTCTATGGTGGCCACTGCTGTGTGACTGATGTCCCTCCCTGGTCCCTGACACTGCTGGCTTCATCTGCCACGCTGGCCATGCTGCCTGTAGAGACACGTGGTCAGAGAACTCAGGGCTGTCTGCAAGCCATCTTTCCCTCCCCAGCCTGCATGGCTTTTGCCCGACACCTCAGCAACTGTGACATTTCCCCAGAGAGGGACCCCATTTCCCAGTGGTCCCCACCTCAGCAGTATCAGGGCAGGAGGCCCTAGGCACCTGCGCCCACCCTGCCCCTGAGGAAGTTATGTCAGTTTACAAGAGCATCTTCCTAACCCACTGTCTTCCGTCAAAAACTCTTCAGGCCAGGGATCCCGTGTCCCTCACTCTGCTCCAGTGGCCAGACAGAGGCCCACACCAGCCCTGAACGATCATAAGAAAAGCCAGAATTCACAAGCACTGGGAAAAGTTCAAGGATTAACCAAGGAAAGTGGCCTCCCACCCTCCACTCCAACGTCTGACCACCAGTGCCCCTCGGAGTCCGAAGGAGCGCTGTCTCCACCTGGGTATCCCCGGGCTGCCGCATTAAGGGGAGAAGGGAGGCTAACAAGAGGAGGAAGCTGGGCACATCCAGGCACCAAGACCCCAATACTGCACTGCTCCTCCCATGACTACCACACCACGACTAAGGTCTACCTGCTTTCAGAAACGCCTGTCAACCAGGTGCTTTGTTCAACCCCAAAGACACGCACACTGTTCATGGCAGGAACACAAAAACTGCCACAGCGGCTAGCTAGACTTAGGCTTAACCCCTTCCTGTGCAATGGGCTCTGTGGAGGCTGGCATGGCAGGGTC EMBV3_22102 TTGCCAAGACTACCCAGGAAACCATCGACCAGACTGCTAACCAGGCCTCTGAGACTTTCT Gene GeneID:613941|C28H10ORF116:NM_001114513:17_cdna Constitutive 1 NULL GeneID:613941 28 GENE C28H10ORF116 MGC137003 chromosome 10 open reading frame 116 ortholog EMBV3_19280 GTAAAGGAGGAGGGTGAGATGCTTCCTGCGTTTCTTGATTACAGTTTGTGTTCTTACAAA Gene GeneID:507890|PRDM8:NM_001103232:32_cdna Constitutive 0 NULL GeneID:507890 6 GENE PRDM8 MGC179411 PR domain containing 8 EMBV3_25529 GAGTCTCATTCCTATGCACGGTGTTTCTCAGGAGGATGGCGCTAGTTAGCTATATTCCAG Gene GeneID:615480|SLC35F5:NM_001101242:17_cdna UTR3_Alt 2 NULL GeneID:615480 2 GENE SLC35F5 NULL solute carrier family 35, member F5 EMBV3_39302 GTGGGGTAACTGCATATCAGTCACCTTTTTAGCCTGGTGTGTTAAGAGTATTGGGAAAGG Gene GeneID:505302|DUSP12:XM_002685847:379_cdna UTR3_Alt 2 NULL GeneID:505302 3 GENE DUSP12 NULL dual specificity phosphatase 12 EMBV3_41732 CTATGGAAGAGTTAGCCCGTCAGATCGAAGATGAGGAAATCAACCTGCCAGAGAAGCCCA Gene GeneID:786312|LOC786312:XM_002707722:178_cdna Constitutive 0 NULL GeneID:786312 13 GENE LOC786312 NULL similar to Uncharacterized protein C20orf26 EMBV3_20018 CTCAAGTTCGCCTTCGCGGACGCCCCCAATCACTACAAGAAGTGAGGCCAGCGCACTGCA Gene GeneID:618784|TBC1D22A:NM_001076520:59_cdna Constitutive 0 NULL GeneID:618784 5 GENE TBC1D22A NULL TBC1 domain family, member 22A EMBV3_38683 GGAGATGATGGATTCATGTCTTGCGCCCAGGGCTTTAAATTCACCTTGCCCTCAGTGGTT Gene BVT0102_116969 + 0 NULL GK000004.2:30400693-30420508 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181123 TCONS_00181124 TCONS_00181129 TCONS_00181130 TCONS_00181122 TCONS_00181125 TCONS_00181128 TCONS_00181127 TCONS_00181126 1 XLOC_110547 Coding TCONS_00181126 XLOC_110547 Coding Coding DNAH11 4:30418359-30509657 j TSS135659 6663 1 TCONS_00181126_6 1811 0.0169593276301966 30 0.92734701030702 3.56047101450769e-09 2.82158383917701e-06 6.548127145934e-05 2.33779654155346e-05 1.31047687545534e-05 4.30894535608438e-05 1.89272071440972e-46 2.49839891722665e-27 8.20524010833883e-05 1.53153267066012e-139 2.79457931156276e-06 3.56598477647618e-140 7.55458062862157e-20 3.01741229262106e-38 4.03404783804503e-19 5.82860005013713e-06 9.80129635332672e-05 4.34386096199633e-195 0.000151881630732935 2.31972113430365e-13 0.000172491312716981 3.65438099245189e-90 1.26939075505904e-78 2.00043116224567e-180 0.000390405126742807 0.000179318271269082 0.000345007277491853 9.98438196439538e-05 0.000118492835149825 1.11894679100081e-44 XM_003585952.2 DNAH11 PREDICTED: Bos taurus dynein, axonemal, heavy chain 11 (DNAH11), 0.0 9248 99.83 0.771274200810446 NM_001277115.1 DNAH11 Homo sapiens dynein, axonemal, heavy chain 11 (DNAH11), mRNA. 0.0 5923 86.52 0.740507279003452 TCONS_00181126_6 sp|Q96DT5|DYH11_HUMAN DYH11_HUMAN Dynein heavy chain 11, axonemal; 0.0 2802 83.82 0.907785753727222 2 coding 1 0 1 1 -1.30200626908393 0.00629316167223227 -0.031724030224396 0.612821817027215 ATCCTTAAGAGGAGGCTGGAGGTGGATCTTGATGGGACAAACACAAAGTTTAGATACAGACATAATGAAATACTGGCAAATCAGATGAAAGAGAACATCTTCTGAATGGCTTCAGAAAGTTTTCTTTACTCAAAAATGAAGACGCTCTCTTTTCTTGCATCGTCACCTACAAGGAGTGCTAGAAACCATCACTACCACTTAGCATTCGTGACAGGAGAATAACTGGAGACCACAGAAAAGAGAGACAACAGTTTCATCCCAGTCATTTTGTTAACCAACCCATGGCTTTTCTGCAACTAGACTTCTTGGAATTCCTGTTTCCCTGTGGTAGAGGATGCAAAGGTAGAAGAACATAGGGATGAGAGGAAAGACTAAGAAGCATCATACAATATATTCAGTAATTTCTAGGCTTTCTTAGTAGCTACTGGGTACCCTAAGGATTGCCCTGGCCAGTACAAAGCAGCTGTGAAGTTTGAAGTCATTATAAAGACTTTCCAGGAGCCTGTGTGCATTCAAGATTCTGATGATACAACTAGAAAAACCTACAGTGGTTATCAGACACAGCAGATATCCTGAAGAAGAAAAAAAAAAAACCGTTGAGGCACCAAGTCTGGCTGGAAACAACCTATTTATCAATGGATTATTAAGAGCAACACTCACTCATATTTCCTTGGGAAACACGAAGTTTGAAGTTTTTATTTTGAAATGAACAATTAACAAATGGAAAGGACTAAAAAAGGTTTAACTCAAGGACTGCCTCTCAAAATTCTGGCTCCTTCACTCTTAACAAATGTCATTAACACACTGTACTGAAATCCCATTTCAACATCAGGGAGACTGCTACTAATCTGGAACTTTTCTCCTGTGACCTTTTACTCTTGGACTGAATAATAATTATATATTTCAGAGCACTTTGACATTTCCAAAGAGCGTCATTCATTCTTTCACTGTGTGTATTAACATCCCTGTAAGTGGCAGGTGAAGTTTGGAATCAGGATTTTGAATACCTAGATCTTGGGATTCCCACAACTAAGAAAGCTGAATTGCAGTGTTGGTTCTTTTCTGGAATCACCTAACCACTGAGGGCAAGGTGAATTTAAAGCCCTGGGCGCAAGACATGAATCCATCATCTCCTTGTTGCTTAGTCACTTTGAGACTTATTTCTTTGCTCATTAGATAAGCTGACCAATTGAAGCCCTGCCTTTCCAGGTATTAAAATAATCAAGAGGATGGACTTAGCATGGTGTTCAGCACACGGCAGCATTGCTCAAAACACAGCAATTAATCAATACTGGACTCCCTCCCTGGGAGCCCCCACGGAGATGTCCTGTATGCCAGGGAGCCAGAAGGCAGCGGAGAGGCCACCGAGTGGCTCACACCGGTGGAGGGCAAGCCCCTCCCCTGCGGAAAGCCGCTCTGCTTGGTGCTCTCTCCGCCCTCAGCGGGCCGGGGCGGGGACGCCGTTCCCTTGGAAACGGGACGCACTGCTAAAGACCCTCCGGAACTCCGTCCCGCTGCGCTGCAGCTCCGAGAGCAGACGCGGGAGGCCAAGTGGGAGCAGGTGTGGGACAAGCGGCCGCGCTCGCAGTGATCGCTGGAGGAGGTGGGCGCCTCCCGGGGCGCGCGTGTGGAGGTGGCCCAGCCTACCCGGGGCTGGGGAGGGACGCGCACGACGAGCCGGCCGGTCCCGCGCCTACTCGACATACTGGATGGCAGCCCAGGTGGCAGCCCGAGAAGCTCCGATTCTTCGCCTCGCCCCGGGCGCCGGCCCGGAGGCGGCGGTTCTGGTGGAATTGGAGGAGGAAGACGAAGACGAGGAGGTGGCGGCGGCCAGGAGAGCGCGGAGTTTTGCCCAGGACGCGCGGGTGCGCTTCGTCGGCTGCCGCCTGGAGCAGTTACTGGGCCTCCCGGAAGAGAAATGGAGCCAGCATTTGGAGAGTGAAGACAACCGGCAGGTTCTGGGGGAGTTTCTGGAGAGCCCCAGCCCAGCCTGCTGCCTTCTGTTCAGCGTCACCACTGAGGGGCAGCTCGAGGCGTCCCAACAGATTCCAAGAGATGTAAAACATAAACTTGTTTATATTGCCAAGAAGACTACTGAAAACATTGGAGTAAATGACTTCTGTCAGATAGTTTTATTTGGAGAGTTACCTGCCTCATCTCTTGGACACGTAACTGCTTTCCTAGACGAGATTTTAGTGCCAATTATTTCTAATAAGAACAACCATAAATCCTGGTCATGCTTTATTTCACAAGACATGGAACATCATATAGAAGTCTTGAAAAGTAAAATGCATATTTTTAGGGGCAAAATGTTGAGAAGAACTCTTCTACCAATTCCCACTATTGCAGAAAACATTGACCTGGATCAGAAATATTCAGAGACCAAACTGGAGCCAAATGAAAGGAGAGTACTCCATGCAATTGAATCAGTGGTTATTAAATGGTCACATCAAATCCAAGAAATCATAGAGAAAGATTCAGTGCAGCCTTTGCTAAATGGTCTTCACTCAAATCCTCAAACTGAACTGGATTTCTGGATGATGAGAAGAGAGAACCTATCATGCATTTATGATCAACTTCAGACTCCTATTGTCCTCAAAATGGTTAAGATCCTGAAAAATAAGCAAAGCAGCTATTTTCCAACATTGAAGGACATTTTCATGGCTGTGAAAAATGCTCTGCTCGAAGCCCAAGATGTGGAACTTTACCTGAGACCCCTGAGGAGACACATTCAGTGTCTGCAGGAGACGGAATTCCCACAGACCGGTGTATTAATTGCCCCGTTATTTCATACCATCTGTCTGATCTGGAGTCATTCCAAGTTTTATAATACCCCTGCTCGGGTCATAGTTTTATTGCAAGAGTTTTGTAATCTCTTCATTGACCAGGCAATAGCTTACCTTTCACCTGAAGATCTCTTGAAAGGGGAAATTGAAGACTGTCTGGAAAAGGTTCAAGTGACCATTAACATCTTAAAGACTTTCAAAAATTGTTTCTTCAACTATAGAAGAGGATTGGCAAGCTATTTTGTGGGAAATAAGGAACTGAAACCATGGGATTTCCAGTCTAATCTGGTGTTTCATAGATTTGACAAATTTCTTGATCGTTTCATGAAAATAGAGGATATATTTGTCACCATATTGGAATTTGAAAAGCTGGAAAGACTTGAATTTGGTGGTACCAAGGGAGCAATTTTAAATGGACAGATCTATGAGATGAGTGAAGAATTTATGAAACACTGGAAGATTTTTAAACAGCGCACGTATGACCCATCTGATTACAATAACATGGAGTTTGAAAGTGATTATGTTGTATTTAAGTCCAAAACTCTGGATTTTGACAGAAGGCTTGGGACAGTTCTTTGTGAAGCTTTCTTCAACTGCAATGGTCTAGAAGCTGCGTTTAAGCTTTTGACCGTATTTGGGAATTTTCTTGAGAAACCAGTTGTCATGGAAATTTTCAGCCCACATTACAGCACACTTGTGCACATGTTCAGTGCAGAGTTGGATATGTGTAAGCAATTGTATAATGAACACATCAGACAGATTGAACAAGGAAATGTAGTTCTTAACAAGAATATGCCATTTACTTCAGGAAATATCAAATGGGCTAAAGAGGTTCTTGACCGACTTCAGATGTTTTGGTCAAACTTTGCATCTCTCCGTTATCTATTCTTGGAAAGTCCTGATGATACCTTGGTTTATCAGAAGTATGTTGAGATGACAACTTTGCTGAACCAATTTGAAGATCATATCTATAATGAATGGAAAAGCAATGTGAATGAAATCTGTGAATTTAATTTGAATCAGCCCTTAGTTAAATTCAGTGCCACAAGTGGTCTTCTCAGTGTCAACTTTGACCCAAAGCTAGTGGCCGTATTAAGAGAAGTGAAATACCTTTTGATGTTGAAGAAATCAGACATACCAGATTCAGCCTTCACCATCTTCAAAAAAAGAAACACTCTCTTAAAGTACATTGGAAATCTTGAACTTCTTGTGCACGGATATAATAAGCTGAAACAGACTCTTCTGGAAGTTGAATACCCCCTGATTGAGGACGAGCTGAGGACGGTGGATGAGGAACTGCAGGCAGCCGCCACATCGCTGACATGGCAGGATGACTGCTGGGAGGATATCAAGAGGGTAAGGATGGCCACCTCAGAGCTGGAGCGCAGAGTGGAGCGTGCGCAGAATAACGTCAGAGTGATCCAGCAGACCCTGCGGGCTTGGGCCGAGTGCCCGCTCCTTCCCAGGAGAGAACACAGGCGGGAGACCACCATGACTTGGGAGGACAAGAGTGAATTATTTACGAAAAAATACAAGCGAATCCGGGAAGACGGCTGCAAGATACACAACTTGGTTGAGGAAAATAGGAAGCTATTCAGAGCCAATCCTGCTCTGGATGCCTGGAAGATTTATGTAGAATTCATTGATGACATCGTGGTGGAAGGCTTTTTTCAAGCAATAATGCATGACTTAGACTTCTTCCTGAAGAACACAGAGAAACAATTGAAACCTGCACCATTTTTTCAAGCACAGATGATCTTAATGCCCCCAGAGATTCTGTTTAAGCCTTCTTTAGAAAGAGAGGCTGGAGATGGCTTCTATGATCTGGTGGAAGAAATGCTGTGCAGTAGTTTCAGAATGTCTGCCCAGATGAAGCGAGTAGCAGCACATCTGGAAACAGAAAACTACCAGAGTGATGTGGACAACATGCTGGGCCTGGCAGAAGGTAGGCAGGAGATCATGAGGAGAGTAGCAGACGTTATCAGCAAAGTCTTGGACTTCAGAAACACCCTGGACACGTATGCTTACCTCTGGGTAGAAGACCGAGCCGAGTTCATGAAGCACTTCCTTCTATATGGCCCTACTGTGTCGGCTGAGGAGATGGAGCCTCATGTGAATGAAGAGGTCCCTGAACAATCACCAACACTTGAGCAGTTCAAAGAACAGATTGACATTTATGAGGCCCTGTATGTTCAGATGAGCAAGTTTGATGACTTCAGGGTGTTTGATAGTTGGTTCAAGGTGGACATGAAGCCTTTTAAAGTGAGCTTGCTGAACATCATCAGGAAATGGAGCTGGATGTTTCAGGAGCATCTTTTGAGATTTGTCATTGACAGCCTGAATGAGCTACAAGAATTTATAAAGGAGACAGATGCTGGACTTCAGAGAGAATTAAGTGAAGGCGATCATGATGGTTTAGTTGACATTATGGAGCATCTTCTGGCTGTAAGAAGCCGACAGAGAGCTACTGATGAACTCTTTGAACCACTGAAAGAAACCATCACACTCTTGGAAATGTATGGCCAGAAGATGCCTGAGCACGTCTATACTCAGCTAAAGGAATTACCTGAAAGATGGGAAACTACCAAAAAGATTGCAGCAGCTGTCAGACACGAGGTCTCACCTCTCCAAAACGCAGAAGTCTCCCTCATAAGGAAAGCGTGTGTTTTGTTTGATGAGAAGCAGGCAGAGTTCAGAGAGAGATTCAGATTCTATGCGCCCCTTCGTTTTAATGCAGAAAATCCATATACAGTACTCGATAAGGCAAATCAAGAGCTTGAGGCATTAGAAGAAGAGATGCTGCAAATGCAGGAATCTACTCATCTTTTTGAAGTGGCTCTTCCAGAGTACAAACAAATGAAGCAGTGTCGCAAAGAGATAAAATTGCTCAAGGGGCTCTGGGATGTCATTATTTATGTTAGAAGAAGCATTGATAATTGGACTAAAACCCAGTGGAGACAGATTAATGTGGAGCAGATGGAAGTAGAACTCAGAAGGTTTGCCAAGGAAATCTGGTCTCTGGAGAAGGAGGTTCGCGTGTGGGATGCCTACTCAGGCCTGGAAGGCACAGTGAAGGACACGATGACCTCTCTGAGAGCCGTTGCTGAGTTACAGAGCCCTGCCCTCAGGGACAGGCATTGGCACCAGCTGATGACGGCCATTGGGGTCAAATTTTCCATAAACGAAGCCACAACTTTGGCAGATCTGTTAGCCTTGCAGTTACACCAAGTGGAAGAGGCTGTCCGAAGCATCGTGGACAAAGCAGTGAGAGAGCTGGGGACTGAGAAGGTTATTACTGAAATCAGCCGGACCTGGGCAACCATGGAGTTCTCTTACGAAGTTCACTATCGGACAGGCATTCCATTACTGAAGTTTGATGAACTATTGTTTGAAACTCTAGAGCACAACCAAGTTCAGTTACAGACTCTGCTTCAAAGCAAGTATGTGGAATATTTCATTGAGCAAGTCATAAGCTGGCAAAACAAATTAAACACAGCAGACTCGGTCATCTTTACTTGGATCGAAGTCCAGTGCACTTGGTCTCACCTAGAAAGCATCTTTGTTTGTTCAGAAGATATTCGAATCCAACTTGTAAAAGATGCTCAGAGATTCGACAGAGTAGATGCTGAATTTAAGGAATTAATGTTCAGAACAGCTAAAATAAAAAATGTTTTAGAGGCAACATGTGAGCTGCATCTCTATGAAAAACTTAAAGATTTACAGTACAGGCTTTCTCTTTGTGAAAAAGCTCTTGCTCAGTACCTGGAAACCAAGCGTTTGGCTTTCCCACGCTTCTATTTCATCTCTTCCACAGACTTACTTGACATTCTCTCAAAGGGAACTCAACCTAAACAGGTATATGTTCCTGCTGCTGCTA EMBV3_05172 ACTGGACAGAAGATACAGAAAATCAAAATTGTCTTCCTGACATTTGTGAAAGCATTTTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43355 GGTTCTGGACCACGTCGTTTGTCTACACCAAGCCTGAGCTGCAATCCGGATAAGCCAGAT Gene GeneID:535509|AMOT:XM_002699934:85_cdna Constitutive 0 NULL GeneID:535509 X GENE AMOT NULL angiomotin EMBV3_20810 CATTGTCACTGTCAGCAAGGTTGGAAACCACCAAATTGTACTGAGAGAGGACCAGGTGGC Gene GeneID:615247|LOC615247:XM_002691045:440_cdna Constitutive 0 NULL GeneID:615247 10 GENE LOC615247 NULL similar to a disintegrin and metalloprotease domain 4 EMBV3_29611 CCGGTGTCTGTGGCTTCCTGAATGCCTCCATCCATGTTGGAATCACCTTCAGTCTCTCTT Gene GeneID:505481|LOC505481:XM_002693783:70_cdna Constitutive 0 NULL GeneID:505481 15 GENE LOC505481 NULL similar to Olfactory receptor 5B3 (Olfactory receptor OR11-239) EMBV3_18443 GCTTTGTGAAGGGCTACCTGCTCCCTGATGATAGCAAAGCCACCAAGCACAAAACTCTGG Gene GeneID:536666|SYTL5:XM_002700215:158_cdna Constitutive 0 NULL GeneID:536666 X GENE SYTL5 NULL synaptotagmin-like 5 EMBV3_28645 CACCGGAGAACCCATCTATAACACATGCAAGCATCAGTGAATGCTCAAGACTTTGACACC Gene GeneID:100140123|LOC100140123:XR_084063:444_cdna Constitutive 0 NULL GeneID:100140123 25 PSEUDO LOC100140123 NULL similar to zinc finger protein 75 EMBV3_43055 GCTGCCCTGGTTCTTTCTATAATGCTATGTGATCTGGGTGAACTCAGCCCTTGACCTTCC Gene GeneID:521522|PEX19:NM_001034540:290_cdna Constitutive 1 NULL GeneID:521522 3 GENE PEX19 MGC128107 peroxisomal biogenesis factor 19 EMBV3_25341 CACAAGGTGATAGTTCCTAACCCAGTGTGTCAGTGTCCATGGTTTGCTTATGACTGCAGT Gene BVT0102_128698 + 0 NULL GK000018.2:65636626-65653222 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087784 TCONS_00087785 TCONS_00087783 TCONS_00087787 TCONS_00087786 1 XLOC_052594 Coding TCONS_00087786 XLOC_052594 Coding Coding ZNF606 18:65643350-65655706 = TSS65143 4242 1 TCONS_00087786_6 745 0.0506836397925507 4 0.656980979360583 0.000832852255075015 0.000758936233824723 0.000454527200047189 0.000743943933781906 0.000149769585149003 0.000124177628717655 0.000337275936658008 0.000158653216366194 0.000727655015508479 0.000125619073898067 0.000143941176067637 5.5794284132449e-174 3.6078363425033e-05 3.59079991920333e-05 5.85368043700123e-08 0.0017281961088025 0.000684910168208021 0.00125152643059833 0.000265070077625276 0.000932749588804967 0.000334209562686118 9.13977438509853e-05 7.65995508594481e-23 0.000893835897547331 0.000718241739095961 0.000568736961835168 9.99366539269009e-05 0.000185345329644394 0.000172337956795983 0.00020748007708166 XM_001789294.4 ZNF606 PREDICTED: Bos taurus zinc finger protein 606 (ZNF606), transcript 0.0 7517 99.86 0.985855728429986 NM_025027.3 ZNF606 Homo sapiens zinc finger protein 606 (ZNF606), mRNA. 0.0 4094 86.75 0.810938236680811 TCONS_00087786_6 sp|Q8WXB4|ZN606_HUMAN ZN606_HUMAN Zinc finger protein 606; 0.0 1424 92.36 0.981208053691275 6 coding ATGTTGCTGGGGCTTGGGGTTTGGTTGGAGCTTGTGACCTTCAATGATGTGGCTGTGGACTTCACACAAGAGGAGTGGGGGCAGCTGGACCTTGTTCAGAGGACCCTGTACCGTGACGTGATGCTGGAGACCTATGGGCACCTGCTCTCTGTAGGGAATCAGATCACCAAGCCTGAGGTCATCTCCCTGTTGGAGCAAGGAGAAGAGCCATGGTCAATGGAACCAGCATATCCTCTTCAAGGCACTTGTCCAGAATGGATGAAAAATCTTGAAAGCAAAGCATTGATCCCAACACAGAGCATACTTGAGGAGGAACAGTCCCATAGCATGAAGTTGGAGAGATACATATGGGATGATCCTTGGTTCTCCAGGTTAGAAGTTTTGGGATGTAAAGACCAATTAGAAATGTATCACGTGAACCAGAGTACAGCTATGAGGCAGATGGTCTTCATGCAAAAGCAGATACTATCTCAAAGAGGCTCTGAGTTCTGTGAACTTGGAGCAGGGTGTAGCCAGAGCTTAAACATTGTTCCATCTCAGAAAGTTTCTCAAGTAGAACATTTCTATAAGCCTGATGTAAATGCTGAAAGTTGGAGATGTAACTCAGCCATAATGTATACTGATAAGATTACCTGTGAAAATAATGAGTATGACAAAGCCTTCTACCAGTCCATGCAGCCTGTTCACCCTGCAAGGGTACAAACTGGAGATAATCTTTTAAAATGTACTGATACTGTTAAATCTTTCAATCATATACTGCATTTTGGTGATCATATGGGAATGCATACAGGAGAAAAACTCTATGAATATAAGGAATGCCATCAAATCTTTAACCAGAGCCCATCATTTAATGATCCAGGAATTCATATTGGAGGAAACCAGTATGATTACAAAGAATATGAAAACATCTTTTACTTTTCATCCTTTATGGAACATCAAAAAATTGGTACTGTAGAGAAAGCATATAAATACAACGAATGGGAGAAAGTCTTTGGGTATGACTCCTTCCTTACACAACATACAAGCACTTACGCTACAGAGAAGCCTTATGAATATAATGAATGTGGAACATCTTTCATCTGGAGTTCTTACCTTATCCAACATAAGAAAACTCATACTGGAGATAAACCCTATGAATGTGATAAATGTGGAAAGGTTTTTAGGAATCGTTCAGCCCTTACTAAACATGAACGGACTCACACTGGAATAAAACCTTATGAATGTAATAAATGTGGAAAAGCCTTCAGCTGGAATTCTCATCTTATTGTACATAAGAGAATTCATACAGGAGAGAAACCTTATGTATGTAATGAATGTGGGAAGTCTTTCAACTGGAACTCCCATCTTATTGGGCATCAGAGAACTCATACTGGAGAGAAACCTTTTGAATGTACTGAATGTGGGAAATCTTTCAGCTGGAGCTCCCATCTGATTGCCCATATGAGAATGCATACTGGAGAGAAGCCCTTTAAATGTGATGAATGTGAAAAAGCTTTTAGGGATTACTCAGCCCTTAGTAAACATGAAAGAACTCACTCGGGAGCAAAACCATATAAATGTACTGAATGTGGAAAATCCTTCAGCTGGAGCTCCCACCTTATTGCCCATCAGAGAACTCATACAGGAGAGAAACCCTATAACTGTCAGGAATGTGGCAAAGCATTCAGAGAACGTTCAGCCCTAACTAAACATGAAATAATTCATTCTGGGATTAAGCCCTATGAATGCAATAAATGTGGAAAATCCTGTAGCCAAATGGCTCACCTTGTTAGACATCAAAGAACTCATACTGGAGAAAAGCCCTATGAATGCAATAAATGTGGAAAATCCTTCAGCCAGAGCTGTCACCTTGTTGCTCATCGGAGAATCCACACTGGTGAGAAACCCTACAAATGTAATCAATGTGAAAGATCCTTTAACTGTAGCTCTCATCTTATTGCTCACCGGAGAACTCATACTGGAGAGAAACCATACAGATGTAACGAGTGTGGAAAAGCATTTAATGAGAGTTCTTCCCTTATTGTACATCTGAGAAACCATACTGGAGAAAAACCCTACAAATGTAATCATTGTGAGAAAGCTTTCTGTAAGAATTCTTCTCTTATTATTCATCAGAGAATGCATAGTGGAGAGAAACGCTTTATATGCAACAACTGCGGAAAAGCCTTTACTGGTCACTCAGCCCTCCTCCAACACCAGAGAATTCATAGTGAAGAGAAACTCTGTGAATTGAATTGATGAGGTTTTTATTTTATTGTACACTTGATAACACACTGAAAAAACCCTATAAGTATAATCAAGCAGGGAAATTTTAATAAGAGTTTAGTAAGACTTCTCCCCCTATTAATCAGTAGAAATTATCTTTGTAGAAGAAACCTGTGAATGAAAAGAATAAGTAAAAGCCTTCCACAGTTATGTAGCCCTTGCTTAAAATCAAATAAGTACAATGAAGAGAACTCGAGACTCCCCTCATGGTTCACCAGGAATCCTACTTGAGCAACATGAACATAGGGAATGAAACGGCTATTAGTGAGATCTCTACTGTTTGTGGCTCAGAGTGCATTGTTATGGAAAAAACTTTATCCTAGAAAAGTATTTTCAACTGGAAATACACTGTTTTGCATCCAGATGGAGTACTGAATGGAAGCCTTACAATAACATTTGTGCATCATTATGGAAACACAGATTGTGCTATTGTAAGAGGAGGGTCTGGGTGCCCTTTAAGAATAGAATATGGAATACTAAACCTGAATTTAAGAAAAGAATAGTATTGAGTGGGATATTTACTGTTGATCAAGATTAGCCTTAGGAAAGAGTAGTAAATGAGATTACTAATGATGGAAAGGTTACTGTGCAGAAGTATGAGACTGATGTTCTTGGAACACAAGGTGATACTTCCTAACCCAGTGTGTCAGTGTCCATGGTTTACTTATGACTGCAGTTGGACAATTAGTTTGTAATCTGTTCTAGGCAATCACATAAGTTATAATTATGGACACTGAGTCAGAACGCATAACATAAAGGAATAAAAAGGACACGAAACTGTATGTACATATCCACTAGAACATCTGAATAGTGTATTTGCATAAGGACTGGAAATACTCATGGGTAAATTAACCTAATAAGATTTTAAGTTTTACAAACACATACAGCACTTACTGTGTACTAGACTTTTTTTTAAATGCTTTTCAGATATTAACTTATTCAGTCCCCTTAATTCTATAAGATAGGAACTATTATTATCTCAATTTTACAAGTGGGGAAACTGAGGCACAGATCATAAGAAACCTACCTAAGGACACACAACTAGTTAGGAGTAGAGAGATTGACTCCAGAGTTCATGTTTATAACCACTGTGTTACGCTGCCTCTGCAGTGATTTTTTTTTTCCCCTTAATGTGTTTTTAAAAATTTTCTTCACTGTTTTTATAGTAGATATTTGGTAATAAAAATCAAATTCCTAAACAATGAGAAAGTTATCTGGCTCTTTGCCTGTGGAATTTCTGGTAATATGAGAGCAAAGCTCCCTTTGAAATATGAAGTCTAGATTGGATGTTGAGGATCACTGCATTTTCTGGGCTCTGGTTTCCCAAGAATTTCACCACCTCCATCCCTGAAGATTATAGTCGACCAGGGGCTGGAGGACTCGCTGGAGGTTTGGGCAAATCAGAGGAATGCCCCTTGATGGGTTTAGAATTACCCTTCATGAGGCAGAGGGCAAGAAACACCTCTGCACAGGAAATCCCCGTTTCTCAAGGTCTCCCTGGGATGCAGTGTTTCCTTATCTTCTCTAGATGAAAAGATTGCTTGATAGTAGGGAGGACTCAGAAGGGAAGAGAGATCATCAATCATCTCATAAAGTGAGGAAGTTTCTCTGCTCAGAGTGGAAAGAGGGGGTAAGATGAATAGGAGGACTTGGGTGGTATTTCTTTGGTTCACAAATATTTCCTGTGTTCCCCTAAAGTTGGGCCATTATTTGGGACCAACAATCCTTCCTGGATAGGTTTCAACGGTATTGGTTAGAAATCCAGGGTACAGAAAGTTCATCTAGTTCTCTAGGGGTCCATGACGCTCCAAGGGGTGAGAAGCAGTCACCTGCTGGTATTGTGGGATGCTGTGTTCACTATCTGATGCCTATAGCTGGTGCTTATATAGGTGGTATCTGATCCTTACCTTAATGTATAGTTAACCCAATAAATGTTGCAGGGGTAAATTAATTGGATTTCTCATGTGATTTGTGCAA EMBV3_09525 ACCCTGTGCCCATGACCTCACTCTGGCCCCGTTTGTACACTAATCACCTGAGTTTGTCTT Gene BVT0102_126664 + 0 NULL GK000011.2:101151550-101158277 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026312 TCONS_00026311 TCONS_00026313 TCONS_00026314 1 XLOC_014964 Coding TCONS_00026314 XLOC_014964 Coding Coding ABL1 11:101011168-101152856 = TSS18880 5595 1 TCONS_00026314_6 1151 11 0.960589186022712 0.0135985895007534 0.00752386045630192 0.00416386148096286 0.00492358682010065 0.00433985300069249 0.00303370990672125 0.00309134300806224 0.00433433158451601 0.00740401026294835 7.77948676115223e-05 0.000720828118565566 0.00080400649985537 0.00232841983534341 0.00339546004241554 0.00501112130002354 0.000613038701953272 0.000231301654076924 0.000583761969968797 0.00343029807232974 0.00789890828366536 0.00148229213475695 0.000727981163448136 2.87958060815283e-13 1.4152106045002e-11 0.00952845092740031 0.00558740245470766 0.00453419613107614 0.000281409852557778 0.000353324678996795 0.000293362184997528 NM_001206860.1 ABL1 Bos taurus c-abl oncogene 1, non-receptor tyrosine kinase (ABL1), 0.0 1.009e+04 100.00 0.99982126899017 NM_007313.2 ABL1 Homo sapiens c-abl oncogene 1, non-receptor tyrosine kinase (ABL1), 0.0 4408 86.97 0.647721179624665 TCONS_00026314_6 sp|P00519|ABL1_HUMAN ABL1_HUMAN Tyrosine-protein kinase ABL1; 0.0 1981 90.53 0.960034752389227 7 coding 1 1 1 0 -0.00431990703325616 0.972621841843649 -0.00568396659461851 0.923306859429795 CTTCCTTTTATTGTGGAAGATGTCTTGTGATTGACCTCAGTTACTGACTGGTGGAGATGCGGGGAATGTGAAATCCCACGTAAAGACCGTTTCCTTCTCAGCTCACTGATCATTCTGAAAGATCTTGAACCCTCTTCTGGAAAGGGGTGCCTATCCTTGCTTTATGGGGCAGCAGCCTGGAAAAGTTCTTGGGGACCAAAGGAGGCCAAGTCTGCCTGCCCTGCACTTTATCAAAGGAGCAGGCAAGAAGGAGCCATCAAGGCACGGGGGTCCACACTGCAATGTTTTTGTGGAACACGAAGCCCTTCAGAGGCCAGTAGCATCTGACTTCGAGCCCCAAGGTCTGAGCGAAGCAGCTCGTTGGAACTCTAAGGAAAACCTTCTTGCTGGTCCCAGTGAAAATGACCCCAACCTTTTTGTTGCACTGTATGACTTTGTGGCCAGTGGGGATAACACTTTAAGCATAACTAAAGGTGAAAAGCTCCGGGTCTTAGGCTACAATCACAATGGGGAGTGGTGTGAAGCCCAAACCAAAAATGGCCAAGGCTGGGTCCCAAGCAACTACATCACACCGGTCAACAGCCTGGAGAAGCACTCCTGGTACCACGGGCCTGTGTCCCGCAACGCCGCCGAGTACCTTCTGAGCAGCGGGATCAACGGCAGCTTCTTGGTTCGGGAGAGCGAGAGTAGTCCTGGGCAGAGGTCCATCTCACTGAGATACGAAGGAAGGGTGTACCACTACCGCATCAACACTGCTTCTGATGGCAAGCTCTACGTCTCCTCCGAGAGCCGCTTCAACACGTTGGCCGAGCTGGTCCATCACCACTCCACTGTGGCCGACGGGCTCATCACCACTCTCCACTACCCGGCCCCCAAGCGCAACAAGCCCACCGTCTACGGCGTGTCCCCCAACTACGACAAGTGGGAGATGGAGCGCACGGACATCACCATGAAGCACAAGCTGGGGGGCGGCCAGTACGGGGAGGTGTACGAAGGCGTGTGGAAGAAATACAGCCTGACGGTGGCCGTGAAGACCCTGAAGGAGGATACCATGGAGGTGGAGGAGTTCTTGAAAGAGGCTGCAGTAATGAAAGAGATCAAGCACCCCAACTTAGTACAGTTACTCGGGGTCTGCACCCGGGAGCCCCCATTCTACATAATCACTGAGTTCATGACCTATGGGAACCTGCTGGACTACCTGAGGGACTGTAACCGGCAGGAGGTGAACGCCGTGGTGCTGCTGTATATGGCCACGCAGATCTCGTCCGCCATGGAGTACCTGGAGAAGAAAAACTTCATCCACAGAGATCTTGCTGCCCGAAACTGCCTGGTAGGGGAAAACCACTTGGTGAAGGTGGCTGATTTTGGCCTGAGCAGGCTGATGACAGGGGACACCTACACAGCCCACGCCGGGGCCAAGTTCCCCATCAAGTGGACGGCGCCCGAGAGCCTGGCCTACAACAAGTTCTCCATCAAGTCGGACATCTGGGCATTTGGAGTGTTGCTTTGGGAAATTGCTACCTATGGCATGTCACCTTACCCAGGAATTGACCTGTCCCAGGTGTATGAGCTGTTGGAGAAAGACTACCGCATGGAGCGCCCAGAAGGCTGCCCAGAGAAGGTCTACGAACTCATGCGAGCATGTTGGCAGTGGAATCCCTCTGACCGGCCCTCCTTCGCTGAGATCCACCAAGCCTTTGAAACGATGTTCCAGGAATCCAGCATATCAGACGAAGTGGAAAAGGAGTTGGGGAAGAAAGGCATGCGAGGGGTTGCAGGTACCCTGCTGCAGGCCCCAGAACTGCCCACCAAGACGAGAACCTCCAGGAGAGCTGCTGAGCACAAAGACAGCCCCGACATGCCCGAGACACCCCACTCCAAGGGCCCAGGAGAGACTGATCCTGTGGACCACGAACCCGCTGTATCTCCACTGCTCCCTCGAAAAGAACGGGGTCCTCCGGATGGCAGCCTCAATGAGGATGAGCGCCTGCTTCCCAAAGACAAGAAGACCAACCTGTTCAGCGCCTTGATCAAGAAGAAGAAGAAAACCGCCCCAACCCCTCCCAAACGCAGCAGCTCCTTCCGGGAGATGGATGGCCCGCCTGAGCGGAAAGCGGCCAGCGAGGAGGAAGGTCGTGAAATCAGCAACGGGGCGCTGGCACCGGCACCCCCGGATGCAGTGGAGTCGGCCAAGTCCCCAAAGCCCAGCGGCGGGGCCGGGGTCCCCAACGGAGCCTTCCGGGAGTCTGGGGGCGCGGGCTTCCGGTCGCCCCACCTGTGGAAAAAGTCCAGCACTCTGACCAGCAGCCGGCTGGCTGCCGGTGAAGAGGAGAGCGGCAGCGGCGCCAGCAAGCGCTTCCTGAGGTCCTGCTCGGCCTCCTGCGTGCCCCACGGCGCCAAGGACACAGAGTGGCGGTCAGTCACCCTGCCTCGGGACCTGCAGTCCACCGGCAGGCAGTTCGACTCGTCCACCTTTGGAGGCCACAAAAGCGAGAAGCCGGCCCTGCCTCGAAAGCGGGCAAGCGAGAACAGGTCTGACCAGATGACCAGAGGCACGGTTACCCCGCCGCCCCGGCTGGTGAAGAAAACCGAGGAGGCCGCCGACGAGGTCTTTAAGGATGCGGCTGAGGCCAGCCCAGGCTCCAGCCCACCCAGCCTGACGCCAAAACCAATTCGGAGGCAGGGTGCGGCCGCACCTCCCTCCAGCCCTCCCCACAAGGAGGAGGCCGGCAGGCCCAGTGCCGCGGGGATGCCCGCTGAGCCGGCACCCCCCACCAGCCGGGCCGGGCTAGGAGCCTCCGGAGGACCCAGCAAGGCTGCCGCCACTGCTGCAGAGGAGCCCCGGGGGAGGAGGCACAAGCCCACCTCTGAGTCCCCAGGGAGAGACAGGGGGAAGCTGTCCAAGCTCAAACCCGCCCCGCCACCCCCGCCACCCACCTCCGCTGGCAAAGCCGGGAAGTCCTCGCAGAGCCCGAGCCAGGAAGCGGCCGGGGAGGCAGGCGCCGGGGCAAAGGTGAAACCTGCAGCTCTGGCTGCGGATGCCGTAAACAGCGACACCGCCAAGTCTGGCCAGCTGGGAGAGGGCGCCAAGAAGCCCGTGCTCCCATCCATGCCAAAGCCGCCGGCATCCACCAAGCCGGCGGGGACCCCGACCAGCCCCGCCCCCACCCCCGCCACCTTGCCGTCAGCACCCTCTGCCCTGGCAGGGGACCAGCCGTCCTCCACCGCCTTCATTCCACTCATATCGACCCGCGTGTCTCTTCGGAAAACCCGGCAGCCTCCTGAACGGATCGCCAGTGGCGCCATCACCAAGGGCATGGTGCTGGATGGCACGGAGGCCCTGTGCCTGGCCATCTCCAAGAACTCAGAGCAGATGGCCAGCCACAGCGCCGTGCTCGAAGCCGGCAAAAACCTCTACACATTCTGCGTGAGCTACGTGGACTCCATCCAGCAAATGAGGAACAAATTCGCCTTCCGCGAGGCCATCAACAAACTGGAGAACAACCTCCGGGAGCTGCAGATCTGCCCAGCAACAGCAGGTGGTGGCCCAGCGGCCACTCAGGACTTCAGCAAACTCCTCAGCTCCGTGAAGGAGATCAGCGACATCGTGCAGAGGTAGCAGGAGCCGGCGGCGCATGAGGGCTCCCTGTGTGTGCCTGGGGCAGCGGGCAGGCGGCCAGCAGGACCCGCACGTGGGGACCTTGGCCTGTAGCTCTGCACTGGGCAGAGCGGCTGCCGCCGTGGAACGCGGCGCCACGACTTTGTCCTACCCGCCGTCCTCCTGCGCTCGCCTCCCCCCTCCTCCTGGCCCCCGGAGCCTCATCCAAGTTCTGTCTGTGGAGTTCCCACTCTGTGGACCGCCATGGGCATCCCAGCCTCCTCCCTGCACATGGGGCTTCAAAACTGAGCCCTCGGGGCCAGGCGGGAAGGTCGATGAGCATTTCCTTTCCATCTTCCTCCCTGGAGGACCTCCACTGGCTCTGCCTTCGCCCCCTTTGTCCCAAGGAAGGAGCACTCTGAACGGGAGCTAAGTCAGCAGAGCTTGGGGACTGTCCCCTCCACTCACCCCAGGCAGCGAGTGTACACTCCCCTCGCTCGGGCCGCCTGCTGAGGACCTGTGTCCAGAGCCACGCCCCGGGAAGCGGGGCCCAGGGGTCACCCCACCCCCCCCTCCTTGCACCATCCCCCCATGTGAAGGACAGCTCTTGACTAGGGGCTGAGACAGGCCAGGGCGCCGCCATCAGCCAGCTTCTGGGTCCCGGTCTGGGGGGGAAGCCAAGGAGTCCGCGATGGGGAGAGTTTCCTTGTCGTCCTCTCCAGGTCCTCAGGGCCCTGTCACCTGCTCTCCTGTGACGTGCACTGCTAATCCTGGATAGAAAGCTTGAGTCTGGAGGGTAGCAGGGTCACGGGGGAGCACACGGGGGCTCCAGAGGCAGGAGGAGGTGGTGAGCTTGGGGGCGCAGCCAGGCCCAGGATGGCCCAGAGCAGGGCCTGGCAGGTCGGCAGTGAGCACAGTTACCTTCCTTCCGAATTCCCGGGGTCCCTGATAAGGTGCTTGGTCTTTACTTCCACTTGCTCTCTTTCCATTCCATTGTGCTCCTCTAAGGCAAAGTAGATTCTTGCAGAGCTCTTTCCCTGGTGACGAGCCAGTCTTCAGCTTTCCAGAGTTCTTGAAGCATTTCCAAACTGCCCTCAGCACAGCTGCCTCTCCAGAGAGAAGGACCTGCCATCGGGCGCCCAGCGAGCATGCAGGAGGGAAAGGACTGGGGCACCAAAGCCCCGCCCAGCGTGGGTCATGCCCCGATGGGCACATAGCTTATTTAATTACCATGAGCACGCTTAACCTAATGTTCCAGTGGGAGTCATCAGGGATGAAGAGAATCAGACAAAGGAAACCCCAGGAAGTGTCTGAGAGAGCAGTCCTCAGCATCATCTCCTCGGGCTGCCCAGGACTAGGCTCGGGGGTAGGAGCCCGTGTGCCCTTGACCTGGAGCAGCTACTGAAGAGTGGGCTGGCACCTGCCTGGGCCTTGCTCAGGAGAACCGGTGGAGAAACCAGGAGGAGACCGCCTCCCACCCGCTCCCCAGGCCACCCTGTGCCCATGACCTCACTCTGGCCCCGTTTGTACACTAATCACCTGAGTTTGTCTTTTATTTCTCTGATAGAGATGGTTTCCTCTGGGTCGTTTTATGCTGTTTTCACAGCGCCTCACCTCTTTGCTCCCCCCGGGCTGCTGTGCTGTGCAGGCCGAGGGGGGAGGGTGCCCCAACACCGCCAGTGGCCTTGCAGACGAAGCGGAACGAAACCCACCAGGTCCCCTCAACTGCCCGTTTCTGAGGTACTTGTCTCTTCCCGTTCACACGATGTGCCACTATATTTTGCATTTATACTTTGATATTACACTCTTTTATAGACTCGCCCTTTTATAAATGACTGTAAATAGTTTCCCACTGTCCTCCCTTCTGGAATGCCTATGGTGTCTTTTTTTTTTTTTTTTTGGTCCAGTACATTTTGTTTCTGTATATGACTCTCTGTTTTTTTGAATCCACGTCTCCCCTCCGTAGTATTTTTTAAATAAATGTTTACAACACCAGA EMBV3_16918 TGGTGGTACAGTGGATAAGAATCTGTCAATGCAGGGGACACCAGTTCAATCCCTGGTCTG Gene BVV0102_305317 + 0 NULL GK000007.2:16527427-16534412 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219272 1 XLOC_132591 NonCoding TCONS_00219272 XLOC_132591 NonCoding NonCoding - 7:16531890-16532823 - TSS163270 933 2 TCONS_00219272_1 43 0.710610932475884 1 0 0 3.23101599068976e-05 0 0 1.05834491724444e-05 2.25524977370488e-07 2.50019985747169e-05 0 0 0 0 0 0 0 0 0 0 0 0.000639465697638011 0.000693708360388923 0 0 0 0 0.000701759496174902 0.000169906868175226 8.79186840708112e-05 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 1e-43 181 74.69 0.329046087888532 0 noncoding 0 0 0 0 -0.18479659512958 0.175545038585717 0.0271570682865747 0.650386461527082 CGGACTGTCACTGTCTGCTTGTCTGACTCACTGAACTCTGAGCTCCCAAGTGCAGGAGCTGTTTCATTCATCATGGCACCCCTGGTACCCAGCATGGTTCTGAGCCCTGGTGACACTCAGTAATCAGCTGGTGGCATAAATAAACCAAGTATCTCTCCCAACTCTTGTCTCATACACACCCAGTAAAGAGCCACAAAAATAGACTGAGGGAACGTGTGTTGGCTTTCAAGTCAGACAAGCCCAAAATATTTATTGTTCACTGTGTGCCAAGCACTGATGTAGGCATTGGGAAACTGCAAGAGATACCACAGGCTCCGTCTCTGTACTCTGGAGGAAGATATCTGGATGAATTCAGTAAGCTCAAGCATGTTCTATGAACCATGCTGACCTAATCTAGTTGATATTTACAGAATATTACACCAAGCAACTGCAAAGTGTATTTTCATTTTGAGTGCACATTGTATGCAGATATATACTGGGCCACTGAAAAAAGTATCGGACTTCCCTGGTGGTACAGTGGATAAGAATCTGTCAATGCAGGGGACACCAGTTCAATCCCTGGTCTGGGAAGATTCCACATGCCTGTACAACTAAGCCCATGTGCCGCAAGTACTGAGCCAGTGCTCTGGAGTCTAGGAGCCACAACTACTGAAGCACATGCACCTAGATCTCATGCTCTGCAACAAGAGAAGCCACCACAGTGAGAAGCCCTCTCACTGCAACCAAGAGTAGCCCCCCAGTCGCCACAACTAGGGGAAGCTGGCAAGCAGCAACAAAAACAGTGCAACCAAAAATAAATAAAGAAGTTAGGAAAAGAAGTGCCAGTTAAGCATATGGTAACTGGAAGAAACAATAAAAAAGATAAGACCACGAAGCAATGAAATAGAAAACTGAAAATAGGGAAAAACAACAAAGTCAAAAGTTGATACTTGG TCONS_00212062 . 5' 1590 TCONS_00212062 . 5' 1590 EMBV3_14743 AGCAGCTACCAAGTATGCATTCTCCAAAGAGGAGAAAGAAGAAATGTTTCCAACCCTCAT Gene BVT0102_443598 + 1 EMBV3_41894 GK000030.2:109999568-110055860 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34142 CTGCTCACAGCTGCCCAGCTGAAAGCCAAGGTATGGCCGCTGCTCAATGGAGAGCTACCG Variant GeneID:614835|LOC614835:NM_001076348:1282_cdna 536^621 1 EMBV3_34079 GeneID:614835 13 GENE LOC614835 MGC139391 hypothetical protein LOC614835 EMBV3_39244 AGGCTTCTGAAATCTCTACTCTGTGCTTTACCTCATTACCCGCCTGACCCCCTAACCCAG Gene GeneID:533343|KCNJ10:NM_001081601:308_cdna UTR3_Alt 1 NULL GeneID:533343 3 GENE KCNJ10 MGC152173 potassium inwardly-rectifying channel, subfamily J, member 10 EMBV3_27522 GACAATCCATTCTCTAAGACCCCTTTTAGATCCAAGTCCCCATAGTTCTGTGGAGTCCCA Gene GeneID:281971|PDE2A:NM_001143846:124_cdna Constitutive 0 NULL GeneID:281971 15 GENE PDE2A NULL phosphodiesterase 2A, cGMP-stimulated EMBV3_19678 GCCCAGCCTCCCTCCTGATCATACTGGCCAGCACACAATGTCAGACTCTTCTTCATTAAA Gene GeneID:100124525|CX3CR1:NM_001102558:2_cdna Constitutive 1 NULL GeneID:100124525 22 GENE CX3CR1 MGC140194 chemokine (C-X3-C motif) receptor 1 EMBV3_14563 CTTCAAAAGGTACCATGGTCTTCAGACTCTGTATCTCAGTCATAACAGAATAACCCTCTT Variant GeneID:532277|RXFP1:XM_002694415:17_cdna 524^595 3 EMBV3_42923 GeneID:532277 17 GENE RXFP1 RXFP2 relaxin/insulin-like family peptide receptor 1 EMBV3_33917 GTGCAAGTGTAAGGGGGAAGGGGTGGGGAAAGCCCTGAATAGGTTCTTACAGGAACTCTT Gene GeneID:505901|PRKCQ:XM_002692066:1_cdna Constitutive 2 NULL GeneID:505901 13 GENE PRKCQ NULL protein kinase C, theta EMBV3_03444 TGAACTTCAGTCTTGGGGCAGAGAGGCTTTTTGGCTGGACAGTACCCAGGCACTCTTTGG Gene GeneID:535897|TRIM46:XM_002685980:306_cdna Constitutive 0 NULL GeneID:535897 3 GENE TRIM46 NULL tripartite motif-containing 46 EMBV3_38276 GGGGCGAGGCAGGGCCAGCAGCAGGCGGGAGGAGACGGCAAAACAGAACAGAAAGGCGGA Variant GeneID:539950|HNRNPU:NM_001076920:92_cdna 458^514 1 EMBV3_27566 GeneID:539950 16 GENE HNRNPU MGC142835 heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) EMBV3_00934 TTCACGGGCTGATCCTAACAACATAGTAGATGACCTGCTCACGCCCTGCTCTCCAGGCGA Gene GeneID:539357|VPS4B:NM_001076156:164_cdna UTR3_Alt 2 NULL GeneID:539357 24 GENE VPS4B MGC139102 vacuolar protein sorting 4 homolog B (S. cerevisiae) EMBV3_14480 AAGTTTCTAGACTTCACCAACATGACCCCCAGTCAGGTGCAGCTCTTTCTGGCCAAGGTG Gene GeneID:613539|LOC613539:XM_002698463:488_cdna Constitutive 0 NULL GeneID:613539 26 GENE LOC613539 NULL similar to family with sequence similarity 26, member A EMBV3_15698 CGACTTCCTCGGGGCCATCGGCTCTGGCACTGGAATTCTGCTTGCAGTCACTATTATTTA Gene GeneID:614128|SEC61A2:NM_001046524:11_cdna Constitutive 2 NULL GeneID:614128 13 GENE SEC61A2 MGC137488 Sec61 alpha 2 subunit (S. cerevisiae) EMBV3_36889 CGGGAGGGCCGACGGCCTCGCGCTGTGAAGGATAGCCAAGAGAAAAATGGATGAGCAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16767 GGTTGTAACCAATGACGTTAGGGGGGTTTCAGTTGGGGTGTAGAAATAGGAAGATGCAAA Gene GeneID:534842|ROBO2:XM_002684652:9_cdna UTR3_Alt 2 NULL GeneID:534842 1 GENE ROBO2 NULL roundabout, axon guidance receptor, homolog 2 (Drosophila) EMBV3_07487 TACCAAGATGGACACAAACAGTCCCTCGCACCCACATACAGTCCGCGTGGTCACATGACA Gene BVT0102_153674 + 1 EMBV3_27573 GK000007.2:22196830-22243651 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216086 TCONS_00216085 1 XLOC_131163 NonCoding TCONS_00216085 XLOC_131163 NonCoding NonCoding - 7:22197425-22198299 - TSS161248 874 3 TCONS_00216085_4 89 0.263157894736842 1 0 0 0 0 0 0 0 0 0 0 3.29671898501205e-05 2.61920477714538e-06 0 0 0 0 0.000966139934206759 0.000272492191897667 8.61244981485788e-05 0 0 0 1.29192025828532e-11 6.84053295976437e-05 0.00107408301149026 0 0 0 5.49495170745133e-05 9.26598698185938e-05 0 XM_005209026.1 DIRAS1 PREDICTED: Bos taurus DIRAS family, GTP-binding RAS-like 1 (DIRAS1), mRNA. 0.0 1577 100.00 0.998855835240275 NM_145173.3 DIRAS1 Homo sapiens DIRAS family, GTP-binding RAS-like 1 (DIRAS1), mRNA. 6e-54 215 69.78 0.573226544622426 0 noncoding CTTTATTGCAGGAAGACTATTTCTAAAGTGAATGCTACACAGACCCCACAACGGGGGGCAGGGGGACACCCACATGCGAGGGGGCAAAGGGGCAGGGGCGGGATCACAGCAAGCATGGCCTGGCACGGTCCCCAGAACCCCTCTGTCCCCCAGGGTCGGGGCAGGGCCTGGGGCAGGAGAGGCCTGGAGGCGGGCAGGGCCCCAGGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCTGCAGACCCCCACCCAGCCCCACTTTCTCTGGCACCTTCAAGTGGGAGGGGTCAACACCAGTTGCTGTGGGCCCTGGACCCACCACAGGCCAGGGGGGTTCAGCTATACCCAAATAGGATGTTACCTGTTCTTCCATGGGCCTGTCCACATGCCGGGCAGTGACACACACGTGCATATGCACACACACAGTGTACCCAGTAAATATTTGCGGAATGAACAGCCACACAGACGCAAGGGGAAAAAACACACTGCTACCAAGATGGACACAAACAGTCCCTCTCACCCACATACAGTCCGCGTGGTCACATGACAACAGCCACAGGGCCTCTCTCTCATATGTGTGCATGCACACACACACAGACACACACACACACACAGCTTCCTCACACCATGACACCTCATGACACCTCATGACACCAGTGCTGCTAAATGGCTCCAGGGAGAGGCCCAGGAGGCAGGCAGCTGAGACCCTCCATCCCAAGACCACAGGCAACTGAATGCTGCCCACGAGCACATGAGCTGGGATGTGGGTCCATCCCTGGTCATGCCTTCAGATGAGGCCACAAATGCATGCTGTTGCAAGTTGCTGAGTTTGTGGTCATGTGTTCCCTAGCAACAGCTGATGGATAC TCONS_00212473 r 3' 311 TCONS_00212473 r 3' 1184 EMBV3_03347 AAGAAATCATGGTCCTGTCACCTTTGTTTCCTCATCACCGGCTCCTGACTCCTCCTGACT Gene BVV0102_176781 + 0 NULL GK000021.2:28286167-28414456 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118984 TCONS_00118983 TCONS_00118985 TCONS_00118987 1 XLOC_072795 NonCoding TCONS_00118985 XLOC_072795 NonCoding NonCoding LOC100335190 21:28286660-28310751 j TSS89230 981 1 TCONS_00118985_1 50 0.706422018348624 3 0.959402241594022 2.50159729979423e-10 0.00121937189877212 0.000433840968400335 0.000169287231900318 0.00042274731191892 9.04045393799323e-06 0.000508261212643101 0.00016278237281406 0.000443080815502899 0.00033251568328959 9.43832886320477e-05 0.000466728496065769 2.92033431077687e-06 0.000589790419876293 0 0.000206211370607549 0.000445197573428266 0.00135554200896476 3.98198886161809e-08 0.000439110604880977 4.64132933250686e-05 0.000138530287477832 0.00132240095993994 0.000581017086924709 0.000233647795039215 0.000110798321558033 0.000636076730756499 0.000813480632203128 0.00033649882052982 0.000269652522982416 XR_229176.1 LOC100335190 PREDICTED: Bos taurus uncharacterized LOC100335190 (LOC100335190), 0.0 1770 100.00 0.998980632008155 NM_020696.3 KIAA1143 Homo sapiens KIAA1143 (KIAA1143), mRNA. 6e-10 69.8 75.00 0.128440366972477 0 noncoding 1 0 1 0 -1.9576423734419 0.00440849576563163 0.033524210832424 0.544455975985398 GGATAATGGTTATTCATGACCAAGAAGGAAAGACCTGAGACATGGAATGAGCGATTGCAGCCCTTCAGTATGACACAGATTCACATCAAGATAAAGATGATGTGCAAAGAAAACCCATGCCCCCAAAGAGATTACAGCCACTCCTCCAGACAGATCCAGCAGGAATAACCACAAAAGTCACCTTGGGGCCACTTAATAGAACAGGGTGAGAGCTCCATGACCCCAACTAGGTAGGGTCTGTGAGTCCCATGTCAGCATTAAAGAAGTTACAGAAGACTGCCGTCTGTCCCTTATCACCCCAATAAAGGTTTCTTGGGGTTCACGTCTCAAGGAAAATTTGAAGTAGGAGATAGATGGTTCCTGGGCTGAACAGCTGGTGATTTTCAAACGGAGCAAAACTGAAGTTTGTCCTCAGCCAGACAAGAATGACGTATTTCCCTTCCTCCATTGTTAGGAGGGAATAAACTGATGGGGGAATTGTGCAGTGAAAAGGAAAAAAGAGGAATGAGTTTTTGTTTTTCACTGCTCTGAGAGCAAAGAAGATAAAGAACAGTGAGCAGGCCTGAACATTCCTAGTTTGTTTTACTTTAACTGCTCCTGGTTCTGAATGTCTGTAACTAAGTTTGCTTTTCTGCACCCTAACTCTGCAGGAGCCACACTTCACTTGACTCTGTGCTAAATACATCCTCTATCTGATGTTTACAACAGCCTTCCCCTTGTAGTTACATGTCAGAAAGAAGGCCTCAGAGCCACCAGACTGCCCAATGCAGTTACGGGTTACTGATGCCAGTTTATGACTGCCTTTGAAATGATGCAAGAGGAAGAAATCATGGTCCTGTCACCTTTGTTTCCTCATCACCGGCTCCTGACTCCTCCTGACTGTGAGCACCTGCCTTAGGGACACAGTTGTTGAGGCAGGAGCATGCTGTGTTCCCCTCTCCACTACCTGAGAATAAAAGCCACTATTCTGTTTCTTCCAAA EMBV3_20661 AATGCCCACTGTAATGAGGGAAACACTGAAAGCTTGGGTACACTTTGTAAGAGCCCCCTC Gene GeneID:613844|METTL7A:NM_001035439:116_cdna UTR3_Alt 2 NULL GeneID:613844 5 GENE METTL7A MGC128396 methyltransferase like 7A EMBV3_29681 GAGGTAGAACTCATTGACCAAACCCTCTGTGTTTCCACCTATGGCATCATCACTTCGAGG Gene GeneID:522055|TMPRSS7:XM_002684770:279_cdna Constitutive 0 NULL GeneID:522055 1 GENE TMPRSS7 NULL transmembrane protease, serine 7 EMBV3_12139 GAGCCTCTGTTGAGTTGCTCACTTGCTTTGTGGCTTTGGGCAAGTCAGATTCCCACTTTG Gene BVV0102_038437 + 1 EMBV3_13732 GK000010.2:28564466-28577030 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013338 TCONS_00013341 TCONS_00013339 TCONS_00013340 1 XLOC_008096 Coding TCONS_00013339 XLOC_008096 Coding Coding C10H15orf24 10:28548917-28566267 = TSS9930 2928 1 TCONS_00013339_3 241 0.0778688524590164 5 0.831517666724307 0.0004232409018306 0.000468993071267449 0.000330881724198801 3.29348356975437e-06 0.000486109047598035 0.000223117962539635 0.000592426692856155 0.000240270237337705 0.000711763254577028 5.81652418806734e-249 4.00452007469789e-05 3.09718754755852e-05 0.0001409391406612 3.50229124043922e-05 0.00013272092405247 0.000560221747164772 0.000607427182461177 9.2242444197155e-126 0.000398020074984727 0.00062692088320619 4.98666269627221e-05 0.000103330780781623 0.000134525811357875 4.89677289647811e-09 0.000530527051825519 0.0002846557088463 0.000405629991375521 5.96713233767926e-05 3.10528239126067e-05 0 NM_001099143.2 EMC7 Bos taurus chromosome 10 open reading frame, human C15orf24 (EMC7), 0.0 1900 99.53 0.363729508196721 NM_020154.2 EMC7 Homo sapiens ER membrane protein complex subunit 7 (EMC7), mRNA. 0.0 1452 90.60 0.360997267759563 TCONS_00013339_3 sp|A5PJA8|EMC7_BOVIN EMC7_BOVIN ER membrane protein complex subunit 7; 3e-174 484 99.59 0.995850622406639 1 coding 0 1 1 1 0.0674445756887501 0.623521627548784 0.0111388412237901 0.882297226218666 GATGACGACATCAGCGCGCCGCTGCAGCGACTGCGAGAGACGGGGAGGGTTTCCGGGGCTACCGGCCTGACCGCCGAGAGCTGCTGTCATGGCGGCCACTCTATGGGCCTTCTTTTCCGTCCTCCTGCTGCTGCTATCAAGGGATGCCCAGAGCTCGGAGGTGTCTGGGTCTACCTCCGACGGGTCAGGAGGGAGTGGGGTCGGCACTGGAGATCGCTTCAAGATTGAGGGGCGTGCGGTTGTTCCTGGAGTGAAACCCCAGGACTGGATCTCGGCGGCCCGAGTGCTGGTAGACGGAGAAGAGCATGTCGGCTTTCTGAAGACGGATGGGAGTTTTGTGGTTCATGATATACCTTCTGGATCTTATGTAGTGGAAGTTATTTCTCCAGCTTACAGGTTTGATCCTGTCCGAGTGGATATCACTTCAAAAGGCAAAATGAGAGCGAGATACGTGAATTACATCAAAACATCAGAAGTGGTCAGACTGCCCTATCCTCTCCAAATGAAATCTTCAGGCCCACCTTCTTACTTTATTAAAAGGGAGTCTTGGGGCTGGACAGACTTTCTGATGAACCCAATGGTTATGATGATGGTTCTTCCATTATTGATATTTGTGCTTCTACCCAAAGTGGTCAACACAAGTGATCCTGACATGAGGCGGGAGATGGAGCAGTCAATGAATATGCTGAATTCCAACCACGAACTGCCTGATGTTTCTGAGTTCATGACAAGACTCTTCTCTTCAAAATCATCTGGCAAATCTAGCAGTGGCAGCAGTAAAACAGGCAAAAGTGGGGCTGGCAAAAGGAGGTAGTCAGGCAGGCCAGAGATGGCATTTGCACAAACGCAGTAACACTGGGTGACATCCATGTCCCGAGGGAAAGCCGTGTGAGGCAACTACTGTAAACTGAGTCATCCTGAAAGTTGATCTCTTACAACTGTCATGTGTGATAACTCTTCAGCACAGGTTTTGTATTTGGTACACAAGGAAACCCAGCTTTCATCCTTTGTCTGTATGAGGTCAACATTGATGTCACTGAATTAATTACAGTGTCCTATAGAAAATGACATTAATAAATTATATGAAGTACGATACATTATGTATATTAAAATAAGTCTTAATCCAGAGATAAAGTTATTTTGTCATTTTTTTTTCACTTTAATGTTTCCTTTAGTCCTTACGGTTTTCTTCTGTCTTTCATTATATGAGGCTTGAACTTAACCTTTCCTGTTTAAAAAGAGTGCTTAGTGTTTTTAGAACAGCATGCACCATGGGTTTCTGTGTAACTAGACTGTTTAAAATTCTTAGTCCTGCCCTGTAGTTTTAACATTCCCTGATATTTGAAGTAGAACCACATGTTCCTGATGTAGTTTTAATCTTTATTATTACAGCTGGTTTCAGAGTGTGGATGTATGAATTAGAGTGGATGTTATCAATCTTTAAATTCTGGTTACCATCTGTGGTTTCATTTTATAATTATTGAACATCAGCTTTATACTGTGATTCAAAGTAAGATACAGAGATGGATAATACCCAGTGCCTGTCTTCAATAGAGCTTATTATGTATGGAGGAAACACAAATAATGACAGAGAATGAGTGGCCAGGGGAAAGAAGCACAGGAGTAGGAGAGCCTTATAGAGTCTGAGGATGGAAAATCAATCTCACAGCTCCATGTTGTCATGTTGATAGTAGAGCAGAGGTCCTTACAAATCCTCTCATCTTCCCCATTATTGATTCTCAGCGGTATTGGAATATAAATTACTACTTTGCAGTTAGGAGTATCTCAAAACCTTTTTATTTCGATAAGTTATGGCAACTTTTCTTTTGGATTGTTTTAATTTAAAGAACTCTGATGCCACAGTATTGCTTCTAGTAGGGCTCCTATCTTCTCCTGTTAAAGAACCCCCCTGTTGCTTTCTTAGGATTATTAAGTTTAAAAAAAAAAAAAAGGATTGGTTCTAAATTCTTATTTTCCTTCTTATAATAGGTACCATTGTTCATTAAAAAAATTTTTTTAATTTATTCATTTATTTATTTTGGCTGCGCTGAGTCTTTGTTGGCCATTGTTCACTTTGAAATGAGGTATTTGAGTTTTCTTTTAAAAAAATAAGTTAAAAACAATTAAAAAAAAAAAAAAGAATCTCCTGGCTGTCCAGGTGTTAGGACTCTACTTCCACTGCAGGGGGCAGAGGTTCGATCCCTGGTTGGGGCTCTAAATCCTGCATGCCATGTGACTTGGCCAAAAAAAAAAAAAAGAAGTTCTGATTCAGGACATTTTAAAAACTGTATCTCTGATTACATTACGTACACTAAAGTTACCACACTAGTTAAGCTATGAATAAATAAGGTGAATAAACTGGATAATGGTAGAACTAGGTCTTTTAAAATAATTATTTATTGAAATAGCTAAAATATCAGAGCATGAATTGAGTTAAAGTTGCAGTTCAAAAGAGTCAGAATATAGTAAGAGTCATAGTTGTTTGGCCAGAAATTATGTTCAAAAGTTTGAAAATTTGGGTTGTCAGAATTTGCACATGGACTATGTGATAAGCTAGAAATTAGAAAGCACTTCCATGCTAATTTAAAAAGTATATGTGATTATTTTACATAGATTTTAACACAGTCTGAACATAATATATGTACCCCTTATCATATTACAGAATGTTACTGCATTGGTTGTATATGAAACTTTTATCTTTGCACAGACCCTTCATCAAATACTTAGTGTGCTTACAGGTGCAGAAATGATGGTATATTAGACAATATGGAGTTGAGTGCAAAGAGCCTCTGTTGAGTTGCTCACTTGCTTTGTGGCTTTGGGCAAGTCAGATTCCCACTTTGAACCATCTCTTGTCCTGTTCATTGTTGTGTTTCCAACATTGAGCATGCAGACACATAATAAATGTTTGTTGAATGAATAAATGGG EMBV3_15277 ATTCATTGATATTTCCTCCATCAAGCAGCAGAGTCTAGGGACTTCCCCTGGTGGTCCAGC Gene BVV0102_164046 - 0 NULL GK000019.2:18463393-18505457 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23128 AGCGCCCAAGTGCCTCAACTACTGAAGCCCGTGAGCCCTATAGCGCATGCTTTGTAAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11751 CCTTTATGAGTTCTAACGGTTGATAAAATTTCTGAGTCTCGTTACCCGTTAGGTTATACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19287 TGGCTGAGTTTGGAGAATACATTCGTAAAGGCAATCCTGCAGGCCTTGGAGCTTCTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16876 CAAGAAGTACATCAAAGATTACATGAAGTCTTCTTTATTGGTGAAAACATGAATCCAGAT Variant GeneID:326599|TPT1:NM_001014388:26_cdna 395^500 1 EMBV3_06720 GeneID:326599 12 GENE TPT1 MGC128232 TCTP tumor protein, translationally-controlled 1 EMBV3_22146 TCGGTGTTTGCTAACAGACATAGGCTGCCGTGGGGCTGCACTTGTAACTCTCTTTCACCC Gene GeneID:338089|ATP6V1C1:NM_176676:14_cdna Constitutive 0 NULL GeneID:338089 14 GENE ATP6V1C1 MGC140015 vatC ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 EMBV3_15672 CAGAGGGTCAGGAACCGTGTCAACTTCAGGATACTGGCTCGAATACTACAGAATGAATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25370 GTGTATTCATAAGATCTCAGCCTTACCAAGGTTGTTTGGTCTGGTTAGTGGTAAATGCCC Gene BVT0102_049343 + 1 EMBV3_28857 GK000016.2:78801871-79001593 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27395 AGATGACCTCTGGGACCTGGGCCTTATTTGGCATCTGGGCAGCAATTGGATCTGTCATAT Gene GeneID:789418|LOC789418:XM_002707755:299_cdna Constitutive 0 NULL GeneID:789418 18 GENE LOC789418 NULL similar to cationic amino acid transporter 5 EMBV3_00784 TTGCTCATTAAGGACAGACCGATGAAAGCCAACCCCAGGGCCCAGTAACCAAGCACTGTA Gene BVT0102_134753 + 0 NULL GK000025.2:26214951-26225845 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146581 1 XLOC_089146 Coding TCONS_00146581 XLOC_089146 Coding Coding SH2B1 25:26207653-26216660 j TSS109558 5086 1 TCONS_00146581_6 756 0.109909555642941 9 0.436264712413946 0.000198611845936911 7.25430820913434e-17 0.000217990289316752 8.46001736755976e-05 0.00023948883295298 0.000103677321728706 2.9008055202835e-05 1.53294591987221e-24 3.53250052952691e-05 6.725420575688e-06 5.58931894287228e-06 0.000177870396094782 2.40794797828873e-15 1.1568300648116e-16 8.37105520058741e-05 0.000374312717054328 0.000260956380334726 0.000158448314505734 9.18199281511999e-05 7.4972214840361e-05 2.29147244513355e-16 0.000352253674835422 1.68541957965888e-17 8.65743602927604e-17 3.79496213674944e-05 0.000652824665282653 4.89386827057511e-24 0.000100793300279178 8.42145603327485e-05 1.38591106120303e-81 XM_005224862.1 SH2B1 PREDICTED: Bos taurus SH2B adaptor protein 1 (SH2B1), transcript 0.0 7252 100.00 0.790405033425088 XM_005255237.1 SH2B1 PREDICTED: Homo sapiens SH2B adaptor protein 1 (SH2B1), transcript 0.0 3573 88.92 0.544435705859221 TCONS_00146581_6 sp|Q9NRF2|SH2B1_HUMAN SH2B1_HUMAN SH2B adapter protein 1; 0.0 1145 93.39 0.998677248677249 3 coding 0 0 0 0 -0.0486364651890166 0.68480305226267 0.0190564221539437 0.688473918376018 GCAGGTGCAGTGGGAAAATGTATCTGAGTCCCGCTTGACGAAAGAGAAACTGACTCACCAGCTTAGGGCCCGCAGGGTCAGCGGGCCTGAAGGGGGGCTTGGTCTGCCTGTGGTGCAGAGGGTTGGGTGGGCCGGTGTGAGCTGAGGTGGCCTCTGCCTGGAGATTGGGCTCTCTGCTGTGTCTACACCTCTTGGCTCGGTTCCCCCGTGCTCCATGACTCTTTAATCTCCTGGCGTCTTGTCGTTGGTTTGGAATTGCCCCTATGGTTGGAGCCATCTCAGTGTGTAGGGTCCAAGCCAAAGAGAAAGGGGAGGGGGCGCTGACCTGGGTCTGAACAGGAGTCTGGGGTTTGGGGAGATTTGCCTGAACTGCCTTCACCCCCTTCTTGGTGCCAGTCATCTTCAAGTATAACATGGGGGAGGAACACTAACAGAAGAGCCATGGGTTTGTAAATTCCCTGCCCAGCTTTGCCACTTGCTAGTTGTAAGACCTTGGGAAGGCTCTTCCTTTTGCTGATTTCTCTTTGAGAAAATCAGAACCCCATAAAGATAGTAATAACGACTGTCATTTGTTGTGTGCTTACTTTGTGTCAAGCCGGGACACGTCCTGTTTAATTCTCCCAACAGTTCTAGGGCTTAGGGATCATTAGTCCTGTTTTATAAATACGAAAACCAAAGCTCAGAGAGGACGTGTAATTTGTTCAAGATCACCCAGCTAATAAGTGGCAGTGATGGAATTTCATCCTAAGTCTAACTCCAGAGCCTATGGCCTTAACCACCAAGCTAACCAGCCTTTAGGGCACACTCCTCTGTGAGAGAAGAGGAAGGTGAGAAACCCAAGGCCCCAGCTCCCTGTTTTGTTTTACTTTGTGGCCAGCAAAGACTCGCCCAGACCCAGCCCACACTGCTGCTGCCTCTGGGCCCCAGGCTGGAGGGCCACCCAAGAAGTGGGCTCTGGCCCTTCCAAGCCTTCCAAATACAGTGCTTGGTTACTGGGCCCTGGGGTTGGCTTTCATCGGTCTGTCCTTAATGAGCAACCTCCGTCCTCAGTGATGGACCGTGGGAGGCAGGGTCTCTTAAGCTCTGCAGGCCTGGCTCCCTTGCAAGCTGGGGCAGTGAGGGGCAGTGGCTTGAGACTGGCACAGTCAGTGCCTGGGGACGAGGACTATGCAGTGGGAAAAACAGGAGACTTGGAGTTCTGAAACTTTCTGAGCTCCGGGTTCCTCTTTTGTTACAGAGGTTGTTAAAACCTCTCGCAGGGAAAGCTGCTGCCGCTCACCCCGTGTCTTCTGGCCGCTTCTCTCTTTGCCGCCCCTCCCCACAGGCTCCCCCTCTCCACCTCCTGGGGGCCATCATGAATGGTGCCCCTTCCCCGGAGGATGGGGCCTCGCCCTCCCCTCCCCCGTTGCCCCCGCCGCCTCCCCCGAGTTGGCGGGAGTTCTGCGAGTCCCACGCCCGGGCGGCCGCCCTGGATTTTGCCCGCCGTTTTCGCCTCTACCTGGCCTCTCACCCCCAGTACGCGGGGCCAGGGGCCGAGGCCGCCTTCTCCCGCCGTTTTGCCGAGCTCTTCCTGCAGCACTTTGAAGCGGAGGTGGCCCGGGCCTCCGGCTCCCTGTCGCCACCCCTCCTGGCTCCTCTGAGTCCTGGTGTGGAGGTCCCGCCACACGACCTGTCCCTTGAGAGCTGCAGGGCGGGCGGGCCCCTGGCTGTGCTGGGCCCTTCTCGCTCATCTGAGGACCTGGCCGGCCCCCTCCCTTCCTCGGTCTCTTCCTCTTCTACAACCTCCTCGAAGCCGAAGCTCAAGAAGCGCTTCTCTCTCCGCTCAGTGGGTCGCTCGGTCCGCGGTTCGGTCCGCGGCATCCTGCAGTGGCGGGGGACCGTTGACCCGCCCTCTCCAGCGGGGCCCCTGGAGACGGCTTCGGGACCCCCGGCTTTAGGTGGGAACAGCAACTCCAACTCCTCTGGCGGGGCTGGGACTGTCAGCAGGGGACTGGTCAGCGACGGGACATCCCCCGGGGACAGATGGACTCACCGTTTTGAGAGGCTGAGACTCAGTCGGGGAGGGGGGGCCTTGAAGGATGGTGCAGGCGTGGTGCAGCGGGAAGAGCTGCTGAGTTTCATGGGGGCTGAAGAGGCTGCCCCTGATCCCGCCGGAGTGGGCCGGGGAGGAGGGGCAGCGGGGCCTACCTCAGGGGGAGGGGGACAGCCTCAGTGGCAGAAGTGTCGCTTGCTGCTTCGAAGTGAAGGAGAAGGAGGAGGAAGTCGGCTGGAGTTCTTCGTACCCCCCAAGGCATCTCGGCCTCGACTGAGCATTCCCTGCTCCACCATCACCGACGTGCGGACAACCACAGCCCTGGAGATGCCTGACCGGGAGAACACCTTTGTGGTTAAGGTGGAAGGCCCCTCGGAGTACATCCTGGAGACAGCTGATGCGCTACATGTGAAGGCCTGGGTGTCTGACATCCAAGAATGCCTGAGCCCGGGACCCTACCCTGCTACCAGTCCCCGCCCCATGACCCTCCCCCTGGCCCCTGGGACCTCCTTCCTGACAAGGGAGAACACAGACAGCCTGGAGCCGCCCTGCCTGAACCACTTGGAGAGTCTGCCCAGCCAGGGCCTGCTGCTGGGACCCAGTGAGAGCAGCGACCGCCTTTCGCAGGGGGCCTACGGAGGCCTGTCAGACCGCCCCTCAGCATCCATCTCCCCCAGTTCTGCCTCCATCGCCGCCTCCCATTTTGACTCAATGGAACTGCTTCCCCCAGAGTTGCCCCCCCGGATCCCTATTGAAGAGGGTCCCCCAGCAGGGACCGTTCATCCCCTCGCAGCCCCTTATCCACCCCTGGACACTCCAGAAACAGCCACAGGGTCCTTACTGTTCCAAGGCGAGCCAGAGGGAGGCGAGGGGGACCAGCCCCTCTCAGGGTATCCTTGGTTCCATGGGATGCTTTCTCGACTCAAGGCCGCCCAGCTAGTGCTGGCTGGAGGCACTGGCTCCCACGGGGTTTTCCTGGTACGTCAGAGTGAGACAAGGCGGGGTGAATATGTCCTCACTTTCAACTTCCAGGGCAAGGCCAAGCACCTGCGTCTCTCGCTGAATGAGGAAGGTCAGTGCCGGGTCCAGCACCTGTGGTTCCAGTCCATCTTTGATATGCTCGAGCATTTCCGGATGCACCCCATCCCCCTGGAGTCTGGAGGCTCCAGTGACGTTGTCCTTGTCAGCTATGTCGTGTCCTCCCAGCGACAGCAGGAACCGAGCACCTCCCATGACCCACCCCAGCCCCCTGAACCCCCTTCATGGACAGATCCCCCACATCCTGGGGCAGAAGAGGCGTCGGGGGCGCCAGAAGTGGCGGCAGCAGCAGCCGCAGCAGCCAAAGAGAGGCAAGAGAAAGAGAAAGCGGGCAGTGGAGGGATCCAGGAAGAGCTGGTCCCCGTGGTTGAGCTGGTCCCCGTGGTTGAATTGGAAGAGGCCGTAGCCCCAGGCACGGAGGCCCAGGGAGGCGCTGGATCTGCTGGGGCCCCGGGGGTGACCCTGATGGTGCAGCTCCAGCAGTTACCACTAGGGGGCGACGGAGAAGAAGGGGGCCATCCCAGAGCCATAAATAACCAGTACTCCTTTGTGTGAGACACCCTACCCCACCTTCTCTCTTCTTGCTCCCCAGCCCACAGTTGGTGAGATTGGGGCTGGGCCGAGACACAGAGGAGCGGTGGGAATCCCCTCCCCACATGCTTCCTGACCCTTGACGGCCAAGGGCATGTATGTTGGTACAAAAAGTTTCAAAAGCCCTAACTCCCCAGTTCATACACTACAGGTGCCCCATCCCCTGGGCAGGGGATTCAGGCTCCATTACCTCCCTACGGGGCTCTATGGCCAGCCCCACCCCTGGGGGCCATTTCCCCATTAACCACCCCTCAGCCCGAGGAAGGGTGAGGGGGAAGGGCTGTCAGTTATATTAAGGTGGTTGTTCTTGTTGTTTTAAACAAAATGGAGAAGCATAACTAAATAAAAGGGTTTATCTCAGTTCCATTGTGATGGCTGTGGCCAGTGTTTGCAGTGGGGGGCTGGGACAGGCGGGTCAGGAAGGTAGCCCACTCTGTTGCCAACTTCAGAGCTGAGAGGCCAGAGGTCTGGGTCAGCTTGAATCCCTGTTGCTCCCAGACCTGAGCTTTTGGCCCATTGCTCCCCGGGGGGCTGTCCTGTTTCTTGAGGGTTAAGTGCGGAGCCAAATCATGCTTCTCGGGGTCTCCAGCCAAGTTAACTTGATGGGACAGGGCCGTGTACAGCAGGATCGATGATTTCCAATCAGTTCAGACCTTCCTACTCTGAATTCTTCAGTTAAGGCTTCTTACCCTGGGGAGAAAGCAGGCCAGGAGAGATTGTGAGGGGCTGGGCTAGGGGCACGGTGGCTGTGTTGGGAGAGATTGAATGTGGCCACCACAGCCTAGCTGCAGAGAGCCCCAGGGGCAGGCTGACTCACCTCTCTTCTCAGAGCCAAGCTGGAAAGCTGAAGGCTGGATGATAAAGAGCACTGGCTTCACTCTGGCCTTTGCTTCTCATTTGTGGTGTGTCCTGGGCAAAGTGTAACCTCTTTAGGCCTCAGTAGCCTCATCGGTAAAATGGGAAGGTTCATCTAGGTTGAAGCCACTGACATGATTTACTTGGCCTGAATGATGTTTCCGTTGGAATTTCACATAAAAGTTCAGATCACTGGTTCCTCCCCAAAGTCAGAAGATCCAGCCTCACGTGGTACCCGCCTTCCACATCTGCTCCATGCCCACCAGCCCACTTTACTCCCAGGAGGCGCCTAGCTGGGCCTGTGAGTGTTTGAATTTGTGACATCTCCCTCTCCTCCCTGTACCCCTCCCCCCACAGCACCCAGGCTCTACTCTCTGGACTGAATTGCAGCTGTGCTCTCCTCCAACTGAGGGCACCCCTGGGCTTCCCAGCTCTGCAGGTGCCAACAAGGAGGAGCCGGGTTCTGAAGAATCCCACCTGTTCTGTTGGCCCTCTCCCTCCCCCACCTCCATCTGGCTGGGCCCCTTCCCATTCTGCCTCCTACTTCCCCTCCCCGGGCAGTGTGGAGGC EMBV3_33207 GCCAGGTTTCCATGCTGCAGACCAGTTCCACCCAATATGATCCTGGTCAGAGACGAAGTA Gene GeneID:529412|FAM26D:NM_001101133:19_cdna UTR3_Alt 2 NULL GeneID:529412 9 GENE FAM26D NULL hypothetical protein LOC529412 EMBV3_01432 CGGGTAAAATGATCCATTCTATGGTAGCTCATTTGGATGCTGTTACAAGCCTAGCAGTAG Gene GeneID:516375|STRN3:NM_001098042:23_cdna UTR3_Alt 2 NULL GeneID:516375 21 GENE STRN3 MGC151634 striatin, calmodulin binding protein 3 EMBV3_03030 ACTGAGTCATCCCAGTGCCAGCACACATCCACTGTCCCCAAGAGTGGCTACAGGAAAAAA Gene GeneID:787473|MGC139448:NM_001080369:220_cdna Constitutive 0 NULL GeneID:787473 3 GENE MGC139448 NULL hypothetical protein LOC787473 EMBV3_13393 GGGACCAACTGGGCCAGCTCAGCTGCCTGGCTGCACAAGGACCTCCCTGGGGAGCTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43733 AAGGGGCTCTACCTCAATATGGCCTCCAATAACATTCGCATCATCCCACCTCATCTCCTC Gene GeneID:539518|CD180:NM_001076168:20_cdna Constitutive 0 NULL GeneID:539518 20 GENE CD180 NULL CD180 molecule EMBV3_04556 TTAACTTCCCTCATCCAAATGTATTTACAGGCTTTGAAACATCTGTTTACTAGTCACAGC Variant GeneID:524246|EPHX4:NM_001075855:153_cdna 676^779 2 EMBV3_21784 GeneID:524246 3 GENE EPHX4 ABHD7 epoxide hydrolase 4 EMBV3_37082 CTTCGTGGGCCGCATCCTTGACTGGCATGTGGCCAGTGACCTGGAGAAGATCCAGCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17829 GGACGGGACCAACGTGAACAACTGGCACTGGTATCATTAGAGAATCTGGTGCGAAGCACA Variant GeneID:531017|AHSA2:NM_001102134:104_cdna 158^348 2 EMBV3_04743 GeneID:531017 11 GENE AHSA2 MGC152531 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) EMBV3_33673 TCTATATAAAGAAGTGAATAGTTCTTTCAAATTTGTTTCCTGCAGTTTGATTTTGTAACA Gene GeneID:504380|ADNP2:NM_001101840:2_cdna Constitutive 0 NULL GeneID:504380 24 GENE ADNP2 MGC160126 ADNP homeobox 2 EMBV3_27867 CCCGGGTTGCTCCCATGTTTCCATCTTCTCCTCTGTTGGTCTGAACATCCTGTTGTAAAC Gene GeneID:527964|PARD3:XM_002692115:14_cdna Constitutive 0 NULL GeneID:527964 13 GENE PARD3 PAR-3 par-3 partitioning defective 3 homolog (C. elegans) EMBV3_08809 CTGATAGAAGAGACAATCCTAAACCAAATGCATTCTAAGGGAAGTAAATCGCCAGACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35158 TTACAAATTCCGGCAGCCCGTGATCTTGCCTTGGTAGCACTGTCTCCTTAGGTAGTGATG Gene GeneID:281421|PPT1:NM_174154:17_cdna Constitutive 0 NULL GeneID:281421 3 GENE PPT1 CLN1 palmitoyl-protein thioesterase 1 EMBV3_28156 CTTTGCTGCTGCCCTTAGCACGCCCTATGTGGTTTTCAGGGAGACACATGATGACCATAA Gene GeneID:788930|LOC788930:XM_002696717:127_cdna Constitutive 0 NULL GeneID:788930 21 GENE LOC788930 NULL similar to G protein-coupled receptor 33 EMBV3_14173 CGGGACTTTGCTGGCCCCTACTTTGTGTCGGTACTGGAAGCTGGACCCCGCTCAGGTCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40747 GATGTTAGCTCAGCGTCTAGTGCTCTGAGAAATGAATATAATTCTTTTGCCGATGGCACC Gene BVT0102_158546 - 0 NULL GK000021.2:55352669-55398979 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119768 TCONS_00119774 TCONS_00119767 TCONS_00119772 TCONS_00119773 TCONS_00119766 TCONS_00119771 TCONS_00119770 TCONS_00119769 1 XLOC_072962 Coding TCONS_00119768 XLOC_072962 Coding Coding FANCM 21:55336786-55395266 j TSS89595 5411 2 TCONS_00119768_5 880 23 0.90786436156569 0.000280537136984372 0.000244398475502173 2.19601995716691e-08 0.00139427478396821 2.50495222177389e-23 2.07590808837167e-35 1.1370394537949e-19 1.53394204816267e-13 0.000920657365231946 0.00111247564339193 1.96706603579644e-05 0.000227592297003784 0.000163831264390051 0.000370885224940189 2.08686599723451e-18 0.000796746711899804 0.000356599401628531 1.19603364485516e-29 0.0011215328566502 0.00280149474294788 0.000171919339438108 0.000995846283226148 0.000838236606474277 2.46739527694353e-23 0.000207011941832694 0.000993725722204494 0.0010688759362916 0.000132262859440177 6.20081832656158e-05 2.88369380292277e-12 NM_001104976.2 FANCM Bos taurus Fanconi anemia, complementation group M (FANCM), mRNA. 0.0 4864 99.96 0.498798743300684 XM_005267929.1 FANCM PREDICTED: Homo sapiens Fanconi anemia, complementation group M (FANCM), transcript variant X1, mRNA. 0.0 3211 86.27 0.499168360746627 TCONS_00119768_5 sp|Q8IYD8|FANCM_HUMAN FANCM_HUMAN Fanconi anemia group M protein; 0.0 1503 80.85 0.988636363636364 3 coding 0 0 0 0 -0.256450219976584 0.254346559640915 0.0442717211636967 0.380178825394352 CCTCTGTGTTTTTTACGCGAAGGTAACCGATGGGGAGTGGAACGGAGGCTGTTGAGCTGCAGCAGCTGCTGGCGTCTGAGGGGAGCCTTCTGTGGTCGTCGGCCTAATGAGCGGACGGCAAAGAACGCTTTTCCAGACGTGGGGCTCGAAAGTTTCTCGGTCCACTGGGGCTCCTACTTGCAACTCTGGAACTGAGCGGCCTCAGAGCACAGGCATCTCCAGGGCGCGTTTTCCTGCAGTAGCAGAGGCGGCAGGGGCGGCAGAGGTTGAGCCCGAGTCAGACGATGATGTGTTGCTGGTCGCGGTGTACGAAGCAGAGAGGCAGCTCAATCTAGAGAATGGCGGGTTCTGCACCTCAGCGGGCGCCCTGTGGATTTACCCTACTAATTGCCCAGTGCGAGACTACCAGCTGCACATCGCCAGGACCGCCCTGTTCTGCAACACGCTGGTCTGTCTGCCCACCGGGTTGGGAAAGACCTTTATTGCCGCTGTGGTCATGTACAATTTCTACCGCTGGTTCCCTTCTGGCAAGGTGGTTTTCATGGCCCCCACGAAACCCCTGGTGACACAGCAGATCGAGGCTTGCTACCGGGTGATGGGTATCCCGCAGTCCCACATGGCCGAAATGACAGGATCTACTCAAGCTTTCACCAGGAAGGAAATCTGGAGCAGTAAGAGGGTTCTTTTCCTTACGCCTCAAGTCATGGTAAATGATCTTTCTAGAGGAGCTTGCCCAGCTGCTGAAATAAAGTGTCTAGTTATCGATGAAGCTCATAAAGCCCTTGGAAATTATGCTTATTGCCAGGCTGTGCAGCAGGTTATTACTAATCTACTCATTGGGCAAATAGAGCTTCGTTCTGAAGACTCTCCAGATATTTTGCCATACTCTCATGAAAGACGAGTTGAAAAGCTTGTTGTTCCTCTTGGTGAAGAACTTGAGGCTATCCAAAAGGCATATATACAGATTTTGGAAGCATTTGCCAGTTCTTTGATTCAGAGGAATGTTTTGATGAGAAAAGATATTCCCAATCTAACAAAATACCAGATAATCCTTGCAAGAGATCAATTTAGGAAAAACCCATCTCCAAATATTGTGGGAATCCAACAAGGCATAATCGAGGGAGAGTTTGCTATTTGTATTAGTTTATATCATGGTTATGAATTATTGCAGCAAATGGGAATGAGATCATTATATTTCTTCCTCTGTGGAATTATGGATGGAACTAAAGGAATGACTCGGGCAAAAAATGAACTTAGCCGAAACGCGGACTTCATGAAACTTTATGATCATCTAGACAGCATGTTTTCACATACACGTAGTACTTCAACAAGTGGCGTTTCTGCTATCCAGAAAGGAGGTAAAGATAAAAAGTTCTGCTATAGTCATCCAAAATTAAAGAAATTAGAAGAAGTTGTAGTTGAACACTTCAAGTCATGGAATGCCCGAAAGACGTCTGATAAGAAGTGTGACGAGACCAGAGTTATGATCTTCTCTTCATTTCGAGATAGTGTTCAAGAAATTGCAGAAATGCTTTTACCGCATCAGCCAATTATTAGAGTAATGACTTTTGTTGGCCATGCCTCGGGAAAAAGCATGAAGGGTTTTACCCAGAAGGAGCAACTGGAGGTAGTGAAACAATTTCGTAGTGGTGGTTACAATACTTTGGTGTCTACTTGCGTTGGTGAAGAAGGTTTGGATATCGGAGAAGTTGACCTTATAATATGTTTTGATGCCCAAAAGAGCCCAATTCGTCTTATACAGCGAATGGGTAGAACCGGCCGCAAACGTCAGGGCAGGATTGTTGTTATCCTTGCTGAAGGACGAGAGGAACGCACTTATAATCAAAGTCAATGCAACAAAAGAAGTATTTATAAAGCTATTTCAGGTAATAGGCAGGTCCTTCATTTTTACCAAGGAAGTCCACGAATGGTTCCTGATGGAGTCAACCCACAGTTACATAAGATGTTCATTACACATGGTGTCTATGAACCAGAGAAGCCTTCTCGGAACTTGCCGCGAAAGTCATCTATCTTTTCCTATAGGAATGGAATAAAGCAGAGTAATTCAAAAGACGATTGGTTCTTATCAGAAGAAGAATTTAAATTATGGAATAGACGATATAGATTAAGAGACACTGATGAAATTCAGCAAATAACATTGCCTCAAGTTCAATTTCTATCTTTACACAACGAAGAGAACAGACCAACTGAAGAACCAACCGTTGGAATTCGTCAATTGTCTCTCTCTGAATGGAGATTATGGCAGGATCATCCTTTGCCTACATATCAAGTCGACCATTCAGATCGATGTCACCATTTCATAAATATTATGCAAATGATAGAAGGAATGAGACATGAAGAGGGAGAATGCAGCTATGAATCAGAAATTAAATCTTACTTACGAATGGAAGATGTTAGCTCAGCGTCTAGTGCTCTGAGAAATGAATATAATTCTTTTGCCGATGGCACCTTTACAAATAACAGGAAGTCTTCATTTGCAAATATAAATCACAGGAAATCAGTCTCAATGACAGAATCTGATGAAGAATGTACTGAAATTTTTAAACAAATTCCTATCAAATCTACTAAAATTCCTTCTTTAAAAAAAAAAGCTTCTGAAAACCTGAAAAAGGATCAGCCTAAAAAGGAAAATAAGGATGTTGTCATGGAGCCTTTAGATACTGATGACAGTCCTACCACTGAACACATTCTTCAGGATTTTGTAGTACAGGTTCTGAGGATGAAGTAGTGGACCATGCATCAGATACAAATAATGAAATTTTAGATGATCTACCTGGAAGGCGTTTAGATATTAAGCAGATAAATAGTACAAATTGTGTTTCAAATCAAGCAGTCATGTCAGGAGCCCATGTTGATAATTCTACAAGTGTAACAACTACTCACCCATCAAGTGAAGATAAGCAGACTCCAGCTTTTTCATGTTTTTCAATGAACGCAACAAAAAGTAAAGAATTTATGTCTCCTAGTTACTCTCAGTTTTTGTTGCCAGTAGGAGACAAAGTTATGAGCACACCACTTTCTGAATCAAATATATTGAACTCATTTTCTGAGAAGAGAATGGAAATGGCTAAAAAGTCAGGTTCTAACATGGGGAAAGTAAATCTACACAGTTTCAAAGAAACATTGAATTCCACTTTTGGTGATTCAGGACTTTCTACAGGAAAGTATAAAAGCAAGAAACAAATCAATCTGCATCAAGCCTGCCATTCTACTGAAGATGAACAATTATCAACCCATGAAAGTGAAGATGATGAGATTTTCCGAAGAAAAAGTAAAAAAACAAAAGGAAATGTTTTGGAGTCCCCAGAGAATCAGAAGAATAGCGAAGTTGATTCTCCACTTCAGGTTGTCAAAAAGCACAGGGTTCCTCCAAACAGATTAGATTTGTCATCTAGTGATGAGAGTGACAATTTTCACAAACGAGATCCACAGTCAGAAGACTTCACGGATCACAAGAGGAATGCCAAAAGAAGCATCAAAGTCCAAAAGAGACAGAACCACCTCAAGCTCGTAGCTAGGAAGTTTTTAGATGAAGAAGCAGAACTTTCCCAAGAAGATGCAGAATATGTTTCATCAGATGAGAATGATGAGTCAGAAGGTGAACAAGACTCCTCACTCCTTGACTTTTTAAATGATGAGACTCAACTGTCACCGGCTATAAATGATTCTGAAATGAGAGCTGTTTACATGAAATCTGTGCGAAGTCCACTGATGAGCAATCGATACAAAATGGCCCATAAGAAACATAACATAAACATTTTCTCCCAGATTCCTGAGCAAGATGAAACCTATTTAGAAGACAGTTTTTGTGTTGATGAAGAGGAGTCTTGCGAAAGCCAGTCAAGTGAAGAAGTTTGTGTTGATTTTAACCTAATAACTGAAGACTGCGATACAAATGAGAGTAAAAAATATAAAACCCGACGTGCAGTAAAGCTAAAACAAATGAAGATGAGACAAAACTGTGCACGTTCAAAAAATAAATTATCCAGAATTATTTTACTGGATGATTCAAGCGAGGAGGAAAAGGATGTAAAGGATAAACAGGAATCCAGGACTGTGGTTAACCCAAGCACGGTGCCTCCTGGGTCTTCACTGCAGTCCAGGGACCACTCTCATCCAGTGGATAATCAATTGCTACACCAGAGACAACAGACACCACCTAATTTAAAGGTTCCCGATTCTGACGTCTCAGACTTCAAACCTCAGAGCCTTACGAACACAGAATCTGCCTCATCGTTGTTCACTGCTGTCGGTGCACAGGAAGACTGTAGAAAGTTTCCAGTTCAGTTGAAGGGTGCTAGCGCTCTGCAGGATTCTGGCACTTGCGTGCCATGCTGTTCCAACTCACGACCACGTTTGGCTGACACACATGCTTCTCTAAGACTGCCCCAGGAAGGCCACAGAACTTGTATTCTTGTAGACAGCCGTGAAATCGTTTCTGGTTCAGAAGTAGTTTCTTCCCTAAGAGCAATCCATGGCTTACAGGTAGAGGTCTGTCCTCTCAATGGTTGTGATTATATTGTGAGTAACCGCATGGTGGTGGAAAGGAGGTCTCAGTCTGAGATGTTAAATAGCATCAATAAGAACAAGCTCATCGATCAGATCCAGTACCTACAGAGCATGTTTGAAAGAATATGTGTGATTGTGGAAAAGGACAGAGAAAAAACAGGAGACACATCCAGGATGTTTAGGAGAACAAAGAGCTATGACAGCCTGCTGGCTACCTTAATTGGTGCTGGGATCCGAATTCTTTTCAGTTCCTGCCAAGAAGAAACTGCAGATTTGCTAAAGGAATTGTCTTTAGTGGAACAAAGAAAGAATGTTGGTATTCATGTTCCAACAGTGGTGAACAGTAATATATGTGAAACTCTTCAGTTTTATCTAAGTATTCCCAATATAAGTTATATAACTGCACTGAATATGTGTCACCAGTTCTCATCTGTGAAAAAGATGACAAACAGCACACCTCAAGAAATTTCGATGTATGCACAAGTAACTCATCAAAAGGCTGAGGAGATCTATAGATATATTCACTATATATTTGACATGCAAATGTTGCCAGCTGATCTTAACCAAGGTAGTATTAAATCTGATACGTGATCAGACTGCTCAGGTTGGGTTATCAGAGAACGATACAAAATGCACTTCAATAATCATTGCTGCAGTTTATGATTATTGGTTTAATACATGTATATGAGAATATTGCCCTATTGTTTTATACTGTGTACATTTTTATTTATATACAATATGTAAATTATTGAAGAAAACATGTGTTTAATAATTATTTTGGTTAATTACATAATGAAACTTGCTTATTGAATAAAAAGTTTATTGAAGGTGCTGTTAAGAAATAAAAGCTAGAGTGAAAGATGTATTTTAGAAATTTTCCG EMBV3_20110 GCTGTCGTCCAGGCTTTGGAAAAAATGAAGGTCTACACAGCAATTGCGCTACCTGTTGTG Gene GeneID:514334|ZPBP2:NM_001075661:130_cdna UTR3_Alt 3 NULL GeneID:514334 19 GENE ZPBP2 NULL zona pellucida binding protein 2 EMBV3_36676 AAGGAAAATCACGGTGATACATGCAGGGTACGGAAACGACCTCGCAGTCCCGAAGCCCCA Gene GeneID:614260|ZNF75D:NM_001078043:17_cdna Constitutive 0 NULL GeneID:614260 X GENE ZNF75D ZNF75 zinc finger protein 75D EMBV3_15301 CACTTTTCAAGAAATGCTCTTGGAGCCCTCGTGCTTCTCCTCGGCCAGTTAGCAGAGAAA Gene BVV0102_073623 + 0 NULL GK000010.2:92224181-92623796 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015425 TCONS_00015426 TCONS_00015424 1 XLOC_008484 NonCoding TCONS_00015424 XLOC_008484 NonCoding NonCoding - 10:92235542-92250427 - TSS10895 1089 1 TCONS_00015424_4 63 0.18732782369146 2 0.926968556839559 0.000914332540731888 0.00111606976231831 0.00125330568879689 0.000593117517962592 0.000312823311643506 4.54232427236452e-08 0.000182028497525417 0.000108625879692023 3.25734277014309e-09 0 0 0 0 7.55921492090857e-05 0 0 0 0 0.00170933961650948 0.00273673180660757 3.85598124208334e-08 0 0 0 0.000325351702775457 0.00052403797908652 0.000408903630157425 0 0 0 XM_001251868.5 LOC783224 PREDICTED: Bos taurus ferritin light chain-like (LOC783224), mRNA. 2e-47 194 70.55 0.377410468319559 NM_000146.3 FTL Homo sapiens ferritin, light polypeptide (FTL), mRNA. 2e-36 158 69.18 0.377410468319559 0 noncoding 0 0 0 0 -2.11954548739427 0.0541500474551042 -0.0432285057672322 0.359356284619959 GTACAAGGTAGCTTCAATTAAGGGTGTCATTAAAACTGAAAAAATAACAATTATTTAGTATTGTGGTGTACTTTTTGATGTTAATGCGTCACCTAGGATAATGTGCTTACGTGCATGCATCGGGGTTGTTTGGAGTTTTTTTGTTTGTTTGTTTTTCTCTCTTTTTTTGATGCAAAAAGCTTTATTGTTTCCATTTGGCCGAAGGCTGAGGAGAAGGCTCTACAGTGATTAAAAAGCTGCCAAGGACTGCAGAGAGGAGCTTCGGGGAGAAGCTCTGACACCACAGGGGCTCCTCAAAGGCCACTGGGCTTCTGCCTCTACTTGTGCTTGTTGGTTAGTCACTAAGCCGTGTCTGACTCTTTTGCAAGCCCATAGATCATAGCCTGCCTGGGCCATCTGGCCATGGCATTCTCCAGGCAAGAAGACTAGAGTGGTTGTCATTTCCTTCTCCAGGGGATCTTCTCCACCCAGAAATGGAACCCTTATCTCTTGCATTGCAGGCTGATTCTTTACCACTGAGCCACCTGGGAAACCCAGTTGTTTGAGGTTGAGCCTTTCGAAGAGGTACCCGCCCAACCCCACCTGGTCAGGTTTTCAGGTGGTCACCATCTCCTTGATGAATTCCAGCTGCTCCTCCTGGGGGCGCTCTCCCGGAAGCCACGGAGGTGCATCTCCGCACACAGAAGCCCGGCTGGCAATGCCAGGCCCACACGGCCCTGGTTTAGGTTTTTCTCCGTGAAAATGAAGGCTTTCCCAGCGTCCTGGGTTTTATCCTGCTCATGTTGAGACACCTTCTGCTTGTCCTGGAAGAGAGTGAGGTCACCTTGCTGGTTTTGCACTTTTCAAGAAATGCTCTTGGAGCCCTCGTGCTTCTCCTCGGCCAGTTAGCAGAGAAAGTGGCCTACATGCTCGTGAACCATCGAGGTGGAAATAGAAGCACGGAGAGAGGTCTGCAAACGAAGTGTGAATGAGATGTATCAGGATGACAGAGAATGGAGCATCTAGATTGCCTGGCGTGTACTGAAAAGGCCAAAAAGAGACAGTGGCATCAAGAAGGAATCAAATGAACTGTCGAATTACTGAAGGTAT TCONS_00015422 s 3' 11363 TCONS_00015422 s 3' 11363 EMBV3_31386 ACAAGAACAACCTGACATCGTGAACAAATTGATATGGACATTTCTGAAAGAAGAAACACG Gene GeneID:524246|EPHX4:NM_001075855:153_cdna Constitutive 2 NULL GeneID:524246 3 GENE EPHX4 ABHD7 epoxide hydrolase 4 EMBV3_29013 CGCTGGAGGCGGCTGTGGCGGCCGCGACTGGTGCTCTGTAACAGAGCCAGACTGATTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28955 CTGTGACCATCAAGACTGTGTTGGAAGATTTGGGAATGGATGATGAAGGAGATGATGATC Gene GeneID:785633|LOC785633:XM_002690068:20_cdna Constitutive 0 NULL GeneID:785633 9 GENE LOC785633 NULL similar to S-phase kinase-associated protein 1 EMBV3_22227 TGACAATAATGTATGATGCGCGTTCTCTTCACTGGTTTATCAGCAGACGTTTCTCTGGGC Gene GeneID:541229|SF1:NM_001081614:98_cdna Constitutive 1 NULL GeneID:541229 29 GENE SF1 MGC142950 MGC157322 splicing factor 1 EMBV3_21449 CAAAGCTTATGCCATCCTCCTGGTCACACATGGACCCTCTCATCCCATCACCAAGGACTT Gene GeneID:537404|SMYD1:NM_001083484:125_cdna UTR3_Alt 2 NULL GeneID:537404 11 GENE SMYD1 MGC137576 SET and MYND domain containing 1 EMBV3_38378 TCAAAAACAGTGGGACCATCACTCCAGCCAGTTGCTCCTCTTCCCCAACTACCACACACA Gene BVV0102_219499 - 1 EMBV3_42027 GK000009.2:45966695-46185781 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00240466 1 XLOC_147130 NonCoding TCONS_00240466 XLOC_147130 NonCoding NonCoding - 9:46128356-46128663 - TSS180144 307 1 TCONS_00240466_1 55 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00025809345651229 0 0 0 0 0 0 0.0020021534934469 5.46078366654857e-05 0 0 0 0 0 0 0 noncoding TGTTGAGGGGAACTGGGAGGTACCTGCTTACTTTTGGCATCTTTCTGTGTGTGTGGTAGTTGGGGAAGAGGAGCAACTGGCTGGAGTGATGGCCCCACTGTTTTTGAGGCCATTTCAGACATTTTCTGGCTGGCTGCAGGTTGTGTCTTTCTTCCAAGGAAAAGTTGGTGCCATTTTGCCAGAGTTGCCCCAGCACAGTGTGTCTTGGAACCCCCACCTGCTAGCACCCAATCTAGCTCCAGCTGGCCTACTATAACCACTTGGCACATGCAGTCTACACAGGGATTGCCTCAGTACAAGGCCACAC TCONS_00235410 TCONS_00235411 TCONS_00235413 TCONS_00235414 TCONS_00235415 TCONS_00235417 TCONS_00235419 TCONS_00235420 TCONS_00235421 TCONS_00235422 TCONS_00235423 TCONS_00235424 TCONS_00235425 . 3' 272812 TCONS_00235410 TCONS_00235411 TCONS_00235413 TCONS_00235414 TCONS_00235415 TCONS_00235417 TCONS_00235419 TCONS_00235420 TCONS_00235421 TCONS_00235422 TCONS_00235423 TCONS_00235424 TCONS_00235425 . 3' 273118 EMBV3_30569 TCCCTTTTGTTCTGTGACCTCGACTTAAATGTGGCTTAACTGGCCCACTGTCTCCTTGGG Gene BVT0102_173563 + 0 NULL GK000004.2:112535370-112726372 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182815 TCONS_00182819 TCONS_00182820 TCONS_00182810 TCONS_00182816 TCONS_00182817 TCONS_00182818 TCONS_00182814 1 XLOC_110992 Coding TCONS_00182814 XLOC_110992 Coding Coding CNTNAP2 4:112468935-112540154 j TSS136560 5581 1 TCONS_00182814_2 108 0.0175595771367139 4 0.921691145496925 0.00179796021291292 0.00157390713887811 0.000316230393190923 0.000495507171611951 0.00301174973718394 3.9778746144228e-05 0.00098266885642187 1.19111153368628e-07 0.00418070887943603 0.00016386351241721 0.000136282091022616 0.000758554016259079 0.00166641087902165 0.00437477424173138 0.00345682813962381 3.68751188339131e-05 0.000100919988047128 3.66363066151579e-07 0.00434114665958389 0.00288706235313846 0.00088674024672351 4.12383438234521e-09 4.98467696121319e-05 0.000102367744293571 0 1.96329863542035e-07 0.00256579275775898 0.000171715811245219 0.000227340132793068 2.67791515165136e-09 XM_003582159.2 CNTNAP2 PREDICTED: Bos taurus contactin associated protein-like 2 (CNTNAP2), partial mRNA. 0.0 9905 99.98 0.984411395807203 NM_014141.5 CNTNAP2 Homo sapiens contactin associated protein-like 2 (CNTNAP2), mRNA. 0.0 2066 71.47 0.750044794839634 TCONS_00182814_2 sp|Q9UHC6|CNTP2_HUMAN CNTP2_HUMAN Contactin-associated protein-like 2; 2e-69 228 100.00 0.990740740740741 0 coding 1 0 1 1 -0.033786931219044 0.777614506312782 -0.0289491135567814 0.716816433393896 GGTGTCCTGGAGTCCTACTGGGCCGGGGGGAGCTCCACGCGCATCACAGAAGCGAGGGGCGCACCTGAGCAGAGCTGACTGCCAGAGAAACAGGGAAGATCGACCAAGAGATCCACACGTACAACACCCCGGGATTCACCGGCTGCCTCTCCAGAGTCCAGTTCAACCAAATCGCCCCTCTCAAGGCGGCCTTGAGGCAGACCAACGCCTCAGCTCACGTGCACATCCAGGGCGAGCTGGTGGAATCCAACTGCGGGGCCTCCCCGCTCACCCTGTCTCCCATGTCGTCCGCCACCGACCCCTGGCACTTGGACCACCTGGATTCGGCCAGTGCTGATTTTCCGTATAACCCAGGACAAGGCCAGGCCATAAGAAATGGAGTCAACAGAAACTCGGCCATCATCGGAGGGGTCATTGCCGTGGTCATCTTCACCATCCTCTGCACCTTGGTCTTCCTCATTCGCTACATGTTCCGTCACAAGGGCACCTACCACACCAACGAGGCGAAGGGCGCGGAGTCCGCCGAGAGCGCCGACGCCGCCATCATGAACAACGACCCCAACTTCACAGAGACCATCGACGAGAGCAAAAAGGAATGGCTCATCTGAGGGGCGGCTCTTTGGCTCCGGGAAGTGGGGGGCGAGGGAGGGGGGGAGCGTGACCAGGGAGGAGGGCAAGGGACGGAAGCACCCTACTTCGTACCCCTGAGCACACCCTGCAGATATCAGCACAAGCTGGGGAGGCAAGCGACCGCAAACTCCTGGAGACTGACGGCCACAAAAAAAAAAAAAAAAAAAAACTTTTTGATATTTCTTTATAGCTGAGTTTCCCCTTCTGTATCAAAACAAAATAATACAAAAACTGCTTTTAGAGTTTAAGCAGTGGTCAACATTTGTAGGTACTATCTGTCGAATATTTTGTGTGTGTTTAGAGAGGTGTTCTGAAAACCCACAGGAACAGGGCCCGTTTTCTACAATTTTCAGCCCCCTTAGAACGTGGGTATTTTTCCTGGAGAAACGTTGATGCACATGTACACGGCCTCCCGCGTTTTCTTCTTTTTGCATAGAGTCAGCCTCTGATGGGCTGTGGTAGTAACTAGTTAGTGTTCATAAGATATTTCTTTGGTGTCCTGTGAATTGGAAAAAGAAAGGAAGGGGCTGTGATTTACCAGTTTTCAGAGAGACCTCAGTGTGTGCCGGTTCTCTGAGAGTTCCCACTGGAGGCAGAGGGGTACAGTCCCTCCTGTGTGATAGAACCATCAGGACAACCCAGAGAAGCTTTCAGACCCAGGGGAAGCAGTCCCCTATTGGATCGCGGGTTTTACTTTGGATCAGAGTCTACGCGATTACACCGCTCCTCATCTGTAGTCTTAGACCTATCCGGTGTCTATAACTGTCAGCTACAATACCTGGTGATCAGCCAAGACAAAGGGATTTCCCTCTGCTTTACCTACAAGATACTAGGTTAGATTGTATGTGTGTGTAAGCACCATGGTGAGGAATTAGAGCCAGATGTTGAGATGTGTTGGCTCTGTGTCTTTTATAGTTGGTAGCAGGAGTGTGGACACTTCTTAGAGAATGCTTAAGTTAGGTTGCTCTTCTTATTTTGCTTTATCTGGTCTTTATGCGCCTGTGACAAGACCCTAGCAGACAGTGTCTCTGAATGGACAGACCAAAATAAAGCCAAGTTGTGATTGCGATTGTTATTGCTATTCTTCTGGAATTATGTGGAAAATCCTGCCCTATTCTAACTGATCTACTCCATGTATTATTCCATCCTAAACAGACGCACGGCCATGATTCAGGGACTTTCTTTGGCAGATACATCTGAAGTTCAGGTTCATCACAACCTGGGAACTGACCGTTGCTTCTCAGAGAATGGACATCTCTGGTCAGCCAGACCTCAGCTTATTCAGGAGCCTTGATCAACTAATTCCGGCAAGGAACTATTTATTTAAAACTAATTGACTGTTTCTGTAGACCAGTGGGACAACTCTCCTATTGAAGCATCCAAAAAATAATTTCATGTATTTATTTTACAAGAAGATTACACAAAAGTTATTTCTAGAATGACTTAACACTTATGATCATTACAGTTCAGGCTGTTAGATTTAATAAGGATGTTAAAATTTTCTTAGACTCCAACGTTTTGAGGCATTAAATAACACTTTTTTCTTTCTCCTCCTGGAAGGAGGTAAGATCAGGTTAAAATGGTACTGTTGGTCAGGTGGCCTACCTTGAGAAAATGGAAATTCTAGTTTGTTTGGGTGATGTATTCAAGACACTTCAGGATAGCTAACTTATTGGAGGACCTCAGTTTCTTGAGTGATGAGACGTGTTATCTTCACTGCACCTGGCACCGGTGCCTGGCACATTCCCAAGGAGACAGTGGGCCAGTTAAGCCACATTTAAGTCGAGGTCACAGAACAAAAGGGAATTCTAAGGCCCTTTTACAGTTGCTGGCCTCAGGCATGAGCATAACACCCTTTATTTAAAAGTCTTGATCATTCTTCCCTAAAATGCATTTAACATGAAAAGCATTCATTGTAACTAATTAGAAAAACGTGACATTTACAAGGACATATTGAAAACAAACATTATTAATTTGGCCAAGATGACTCCCATTAAGGATTATTTTCTATATTGTCAAATTGAAAAAGCAAACTTTAAACTTTATATTTTAAAACGTTTCTGATTTCTTAAAACCTATTTGACAGGTATCACTTTTACACTTGACAAATAACACCAGATGGAAATTTGTTATTTATTGTACTTCCCATGACAGTTTTATTCTACATACATTATCTGAGCACTTTCCCTTTCTTTCCAAAATCATTAAGAAAACAATCAAACGTATCCCCTTCAACTAAAATGTTCCTACCCTTTCTCTTCTCTATCTTTTTCCTGTCACAGAAAAGTGTAAAATAAAACCTAATACTTCTCCCCAAATTTTCAAACGTAGGGCACCAGGATGCCTGTAGGGGTCAGTGTTTCTCCCATCTCAGCATCATTTGAGATGGTTTCTGCCCTAAAGCGGGTAGTAGCCCAGCCCGTGGACAGAACACAACACAGTGGATAAGGTATTAAGTAGTGAAGTAACGTGCCAAATGCGTGCTGGACGTCTCCAATATGGGACTGCAGTCTTCACCCAGATCCCTGACTCTATCTGCGAAGGCCACATGTAGTACCTTCTAAATGCTAAATAATTTTGTTTATGTGCACAAAAGGATGCTGCCCTCTTCTTTCCAGCTCCTCAGGCAGCCATGACATTACGACCCAAGCTCAGTGCCCAGCCTTGCTTTGTCAATCATATCCGGCCAAAGCTGATCCAAACAGCTCACCAGCAGAGCACTAAGAGGCTAGTGATAGCTCTTTCAGTGATAACCGGAACAAAACAAAGTTTCCTTTAAATAAGAGGTTTTTTTTAAAGTTTCAGGGGCAGCTGATGATTGATCCTGGATTGTTCGTGCAGGAAACATCTTCTGTGTACAAACCAAGCATCTCTGTTTTGAGTTGCTAGGATTGGAGACTTTGAATGAATGCAAAATCAGTGCCAGTCTGAGCTCTCAGGGTATTCCCTTGAGCTCAAGGAACCTAGCTCGGGAGGTAAGAAGTTATATTCTTAAGCTCTTCTCTGGCCCTTCTTAGCATAAAAGACAACATTTCCCCTTGTGGCTTTCAAGCAACTGCTCGAAAAAAGAGAGAGACCTGTTGTGTGGGAGTTTTTGTTGAGTTGGAGACAAGAGTTGAGAGTTTTTGTTGGAAAATTCCCTGTTGCCCTGCGCTTGACAAGCAAGCATCCTTTACTTACGGGAGCAGGATTTCTGAGGCTCGGAAAAGAAATTGGCCTGAGCCCAAAAGTAGATTTCATGTTGTTGTTGAACATCTGTGGGGCAGCCACTAGATGGCGCTGAGAGTTGGGCACAACGACACAAACCGTAGTAACTTCCAAAGGAAAAGCACATGTCCCTGTTAGGAAAATGCAGTGTCAGTGTGAAACTTTTACTTCTTTCTCCATCTGTTGTTTTATGTTCTTCCATGTGTTCTTTTTCACTCTCTCCTTTCTCTTATGGTGTAAACGTTTTCACGGTCCCTTAACATCTCACATCTCCAAATGATCAGTACCTGATTGGAAGCTGTTACTATTTTTTCCTCCTTTTCACCATCCTGCCCAAGCAGTTTTCAAAGAGAAAGGCAACAATTGTTAAACTGAATTCCAAATGAGCCAGCCAAAAATAGGTCAAAATTGCTAGTCCCAATAGAACTGCCTCATGTAGAACAGTGTGTCCAACTGACTTGGGCTGAAGACCAATGGATGCCATTTTTAAAATGATGTTTTGGTGAGAGTGATCCTGAGAGTCACTTGATGGAGTGCAAGCCCTTTTCTCTGTCTGACACGCTCTGTGACCTCAGCCAAGTGGCTGACCCTCTCTGTTTCTCTTTGCCTTGTATGTAAGATAGAGCTGTTTTTTATCTGCTTCATAACACAATGGGGAGGTGCCATGGATCCTTGGCTGCAGATACTTTGAAACCCAAACATAAAGGCCAAGTCAGTGGACCTATTTGAAGTCTTACTTTCCAGCTAGTGGTTGTAAGTCATCTCAAAAGAAACCAAGCAGTCAAGTCCAAGAGTGTGGAAACATGAGGCATTGTTGTACAACCATTAGATTCAGAGTCAGGGAGACTGCCAGGGAGCTTTTCTGTCAACATCAGGAGATGCGACACAGCCAAGGGCCAGAGAAACCAGAACTCCTGTGTATAAAGCCCCAAGTTCCCACCTAGGTGTGATGTGACTTGCAGCTTACCATGCCCCAATGTGATTGAAATGGCTTATAAATAAGAAAACATGAACAGCTAATGTGACTATTTCACATAGCCCAGTGGCTCTCTGCTAAACTGCACACACCCTGCATGATGGAAACTTTAAATTTATTTCACAGCAGTATTTTATATATATATATATACAACTGATATGTGCAGCTCACGGTCAATGAAATAGGAAAACCATGTTGAAAAGTTGCTTACCTCCCATGGAGCAAAGACTGGCTGAAGGTAATGAAGATACCTGGGCACATGGATATTAATACTCACCAGGCACTTGTGAGTTTATTTTCCAGATGAAAACGTGCTTTAAGAGCCTGTCTACTTAGATGAGCTGCACCATTTTCTGAGTCTCCGTTTACTTACAGCAATTGCTGGATTTTGAGATGGTTCTCAAAACATGGAGATTCCTCCCATCTTGTAGGCCAAGAAACAGTTCTCAATGTCACTTATTCTAAGTTTTGTTTTGTCGGGTGTTTTGGGTTTTTTTTTTTTTTTTTCAGTGAACATGGTGAACTGCAGAGGTTGAAGTTGTGAAAAGGCTGGGCTAATATTCTCTCTGTAAAGTCAATTAGGCTTTCTATCCCTGTGAAATAACCAGGAAATTTCACTCTCTAAAAGCAACAGCATGTAAACTAGAATGGAAGAAGGAAATTATGTCTGTATGCCTACTCTTCTTTGTGAATGTCTTTCATTTAACTAAAATTATATTAGAAACCAGATTGATAAATAAAAAAGTCCAAAATAGTTTCAATTATCCT EMBV3_22123 TATTCCTTATTATCAAAGTCTATAATTTTGTGTTAAATTTTGTATGAGTATCTGAAAATA Gene GeneID:618234|ZMYM6:XM_002686485:567_cdna Constitutive 2 NULL GeneID:618234 3 GENE ZMYM6 NULL zinc finger, MYM-type 6 EMBV3_10891 TCTGTGGAGAGTGCTTCGGACAGAGGACTTGGAGCTGTGAATATACTTCCTGAAGGGGAG Gene GeneID:539449|PLK2:XM_002696316:41_cdna Constitutive 0 NULL GeneID:539449 20 GENE PLK2 NULL polo-like kinase 2 (Drosophila) EMBV3_08190 CTCTTGTCACCCTCCCGCCTCTGACCGTTCATTCCCAGCTTCCACTCTCCTTTGCTTATG Gene BVV0102_137103 + 0 NULL GK000029.2:37319067-37525947 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165054 TCONS_00165056 TCONS_00165055 1 XLOC_100396 Coding TCONS_00165056 XLOC_100396 Coding Coding SNX19 29:37524991-37555971 = TSS123365 4551 1 TCONS_00165056_6 1000 0.101516150296638 11 0.853449110687885 0.0114233739543699 0.00436090832446139 0.00854594320935164 0.0025443982499468 0.00575322819088528 0.00147598322231863 0.00216372599312088 0.00324579533812073 0.00405291928285826 0.00131124015093932 0.00221820310197239 0.000153002363491779 6.59832251654108e-05 0.000842980735424838 0.000307104643510739 0.0116297061710888 0.00194803915789948 0.00751967320702344 0.00494383750633543 0.00440278351090637 0.0013624295583288 0.00551010989735511 0.00272739477734958 0.00434863789603112 0.00522281358314248 0.00410406267521017 0.00560968050586161 0.00174761294618039 0.00127103283922696 0.00372687349859825 XM_002699253.3 SNX19 PREDICTED: Bos taurus sorting nexin 19 (SNX19), transcript variant 0.0 7142 100.00 0.869918699186992 NM_014758.2 SNX19 Homo sapiens sorting nexin 19 (SNX19), mRNA. 0.0 3068 79.75 0.751043726653483 TCONS_00165056_6 sp|Q92543|SNX19_HUMAN SNX19_HUMAN Sorting nexin-19; 0.0 1474 80.66 0.983 3 coding 1 0 0 0 -3.36324168406536 0.00785007268251632 -0.0923854199765803 0.109099725841357 ATGAAGACAGAGACGGAGATCCTGGCGCCGGAGCGCCCGGCCGGGCCCGGCGTCAGTCACCTGCTGAGTAGCCGGAAGCTAGTGGCCCTGGGGGCCGTACTCGGCTGGCTCTTGGTCATCCACCTCCTGGTCAACGTGTGGCTTCTGTGCCTTCTGTCTGCGTTGCTGCTGGTGCTGGGAGGATGGCTGGGCTCTGACGCCATCGTGGGGGCTTCAGGGCGGCTGCACCTGGAGCGCTTCATCCCAATGGCCGTCTGCCCCCCAAACCCGGAGGCTGAGAGGCAGCTGGAGCTGGAGATCGACCGCACCATCCGGATGATCATGCGGGACTTCGTGTCGTCCTGGTACCGCACGGTGAGCCAGGAGCCAGCCTTCGAGGAGGAGATGGAGGCAGCCATGCGAGGGCTGGTCCAGGAGCTCCGGAGGAGGATGGCCAGGGTGGACAGCCATGCTCTTGCCCAGAGGGTTCTGACTCTCTGCGGTTGTCACCTGCAGAGCTATATTCAGGCGAAGGAGGCCACAGGGAAACAGAGTGGCCCAGGGGAGCCCTCCCAGCTCTGGGAGGCTTACTGCCGGGCCAGCGCTCCACACCCTGCAGTGCAGAGCCCCAGCGCTGAGGTCACCTACACACGTGGCATCGTGAATGTGTTGCTTCAAGGACTAGTGCCAAAGCCGCACTTGGAGACCCGGACTGGCAGGCACATAGTGGTGGAACTCATCACTTGCAATGTCATCTTACCACTGATCAGCAAGCTCTCGGATCCGGACTGGATCCACCTTGTACTCGTGGGCATCTTCTCCAAGGCCAGAACTAACCCAGCAGGAGTGGCTAATCCACTCTGCCCAGCCAGTGCCCTGGAACAGCCCTCAGTGCCCACATCTCTGCCGCTGATTGTTGAGGTCCAGGGTCTCGCAGAAGCCCCTTCTCCAGCAGCAGCCCCAGTGCTCCTAAGCTGCAGTGAACCAGACGGGCCTTCACACCCCTCCCCAGACATTGAAGAAGGCCATGAAGCGCTGGAGGGAGATCTAGGGGGAGTGCTGGAGGAGAGAAAAGTCGAAAACAGCTCTTCTCATTTCCTGCAGCCTCTGTTCTTGTCTGAAGATGCAGAGCTGGAGTCCCCGTTGTCTGAACTGAGCAAAGAAACCATCATGCTCATGACCCCAGGCCCCTTCCTCTCTGCCAGTATTCAGGATGCCCTGTGTGCCCTCGGGGGCTCCCAGCCTCTGGAGCCTAAGGATGGCAAGGGACCCGAAGGAATAGAAGGAGCAGAAGCTGAGGAGGGTCCAGGAACAGAAACAGAGCCGGGCCTGCTTGCCTCCATGCTGAATTCCTGCCCAGAGATCCAGATTGACACAGCGGACAAGGAGGGAGAGCAGGGAAATGACGCCTGTCTCACAACTTTGCTGCCCAGTCCAGAGAGGATATGCCCCCCACGCCCCTCGTGTTTAGAGAAGGATCTCACCAATGGTGGGAGCTCCCTGGACTCCAGTCTGCCACAGGTCCTGCTCTCCTCCTCTCCACCTGGACCCCTCAGCTCAGCCACCTTCAACTTCGAGTCCCTGGGCAGTCCAGACGGCCCCGTGGTCATCCAGAACCTTCGCATCACTGGCACCATTACTGCTCGAGAGCACAGTGGCACCGGTTTCCACCCATACACGCTCTACACGGTGAAGTATGAGACGGCCCTCGACGGCGAGAGCAGCGGCGGCCTGCAGCATGTGGCCTACCACACCGTGAACCGCCGCTACCGCGAGTTCCTGAACCTGCAGACCCGTCTGGAGGAGAAATCGGATCTCCGAAAGTTCATCAAAAATGTGAAGGGCCCTAAAAAGCTCTTTCCAGATCTTCCATTTGGAAACATGGACAGTGACAGGGTGGAAGCCCGCAAGAGCCTCTTGGAATCGTTTCTAAAGCAACTCTGTGCCATTCCTGAGATCGCGAACAGTGAGGAGATGCAGGAGTTCCTTGCTCTCAACACAGATGCTCGTATTGCCTTTGTCAAGAAGCCGTTTGTGGTCTCCAGAATAGACAAGATGGTGGTGAGTGCTATCGTGGACACGTTGAAGACCGCGTTCCCTCGCTCTGAGCCCCAGAGCCCTACAGAGGAGCTGAGTGAGGCCGAGACAGAAAATAAGCCCCAGACAGAAGGCAAGAAGGCTTCCAAATCCAGATTGAGGTTCTCATCCAGTAAAATTGCTCCAGCACTGAATATAACTGAGGCACACGAGAAGGTTCTCTACTGTCTCCAGGACAGCGGTGTGGAGTCAGAGACCCTCTCCGTGTCTGGGATGGAATCCTTTATTGAAAAACAGGCAAAGTTACTAGAAGTGCAGCCAGCAGATGCTCCCGGAAGAGATTCTGAACAGACTGCTGAGGGGTGTGTGGACGGTCGTGTGTCAGATGCTGCTGCTCCAGCCCAAGGCCTCAGCAGCAGTGATCCAGGAACAGAGACCGAGTTGGCTGACACAGCCCTGGACCTGCTTGTCTTGCTGCTCATGGAACAGTGGCGATGGCTGTGTACAGAGAGTGTGCAGAAAGTTCTTCATCTTGTCTTCGGGACCCTAATCCAGAGGTGGCTGGAGGTGCAGGTGGCTCATCTGACGTGTCCACAGCGCTGGGTGCAGTACCTCCGGCTCCTCCAGGAGTCCATCTGGCCGGGCGGGGCTTTGCCCAAGTGTCCTCGGCCTGTGAGGACCCCGGAGCAGAAGGCAGCAGCTGAGAAACAGGCTCTGCAGAGCCTGATGGGTGTCCTGCCAGATGTCATCGTAGAAATCCTTGGGGAGAACAAATGCCGGCTGAGCTGGAGTCTGGTCTTGGAGTCGCTGCAGCAGCCCCTGATCAACAGGCATTTGATTTACTGCCTCTGGGACATCATCCTGGAATTGTTAGAGCTCAGTGCCTCTGCCGAGGAGTCTGCCGTAACCAGCTCCACCGCAGACACCCCAGGAAGACGGGCATCTCCCCTTAGCCAGAGGCCATTGTCCCGTTTCTTCGAGGGTTAGGAAGAGAGGATCACTCTGCCACCCAGAGACCAAGCAGAAGACCATACCCTCTGGAACAGGGCCATACTCAGAAGGCCTAGGGTCTCAGCAGCAACGTCCCCCCTCCCTCCTGCCACACACACACACACACACTTGGTCTGTAGCAGGCAATGGGCGTATATGCACCATTGCACACACATCCATTTCCATGCCTCCTTGTGTGTGGACTATTGCTGGTGGGTGGATCCTAGTTCCTCTGGAAAAGGGAGCCATGGGGGAGAGGAATGAGCCACCCCCGCCCCCTTGCCCTCCTTCCTGACACTATTTGCCGGTAGCCTGGCCTGTGCACACGTGCACCTGACCCCCCATACCCCCCACCCCCATGCAGGCTCCAGGGAGACTGGGAAAAGCACCACAGCTGGGTTTTCTTGAAGGAGAAGACAGTCTTCTGAGTTCTCTCTTCCCACCAGGAAACACAATCCATCCAGGAGTACTCTTGAAAGCCAAAGCACTGGTCTCTCAAGCGTCCCCACAGCCCACAGAGGGAGCCGCTTCTCAAGGCTCTCCACGCTCACCGGTGTTGCCCAGCACCTCGGCCTGCAGAGGACGTGACTTCGGCTGCTGCCCTAGGAAGCTGCGTCCCTGAAGGGCAGACTGCCGAAGCTCCGGGGGGCCACCCCACCCCTCCACCCTTTCCTGAGAGAGGGCTGCACTACAGACTGTACCAGCCCCTCCCCAAGAGCAAGTGCATGCTGGCCTCTGTGGCCTTCCCTGTCTGCCTTCACCCACCCAGCACAGCAGGTCACTCCGCTGTGACGAGTGAAGAACAAGACAGTCAGCACTAGCCTGGAACATTCCTGCTTCTCCTGTCACCCTCCCGCCTCTGACCGTTCATTCCCAGCTTCCACTCTCCTTTGCTTATGGCGCCCGACAGCAGATGTTAGGTCCTGGGCAGAGTAAAATCGTGTGTCAACGTGGTCTCTGGCTCTATGGGTTAGGATGCTTTAGGCTGAAATTACTAAGAACGTTTGTTTTTTTCCATCAAACCAGTCCCTGAGTAGGTGAGGCCCCGGGTTGGCGGATGCAGCATCTCGGACCTCATCGAGGGCCCAGATTCTTCCCATCTTTTTGTTTTGCCTTGTAAACACATTAGCTCATCTTCAGGCCACCAGCCTTCACAGTTGCTGCAGTTCAGGGCATCACATCCACGTATGACAATATCCTTGAAAGAATGGGGGCGTCTCCCCCAGGTTTTCTTTTAAAAAATGAGGAAACAGTTTTCCAGAAGCCCTTCAAGAGTCCTCAGGACTCATTGCCAAAACCACCCGCCCTGAGCCAATCCATGACGTTGAGGATGCTTGAACACGATTGGCTCCTAGTAGTGTTTCCTCCTGGGGAGGTCACTCGCCAGGAAGGTTAGATACCTGAGAAAATAGATGTTAGCAAGGAAGAAGCAGAGGTCGGGTGTTGTTGAAGAGTCTCCCTTGCAGGGCTCATTCTGCAAACACCACCAAAGCCCCCCTGTGCTTAACTTAAGAGTGAGGTTTGCCAAACATGCCACCTGAAGCT EMBV3_23939 GAATGATTCAAACTGTGACCAGGAACTTCTTTCCCTGCTCCTGGACGCCAAGCTCTTGGT Gene GeneID:521982|NBAS:XM_002691524:547_cdna Constitutive 0 NULL GeneID:521982 11 GENE NBAS NULL neuroblastoma amplified sequence EMBV3_37713 GGATTAAACCTAGGGAAGGCCACCATCTCTGCTCGATGTGGCTGTGATATGCTCTTGCTC Gene GeneID:281904|LOXL4:NM_174384:39_cdna Constitutive 0 NULL GeneID:281904 26 GENE LOXL4 NULL lysyl oxidase-like 4 EMBV3_35612 ACGAATCCTCCATGAAGAAGCTCGTGGCCTGCGTGAGCCAGGATAACTTCTCCTTGTCGT Gene GeneID:615629|PRM3:NM_001078053:276_cdna Constitutive 0 NULL GeneID:615629 25 GENE PRM3 NULL protamine 3 EMBV3_06125 AGTGTGGTCCCGAAAACATGTGCATCAGAAGGAGGTGTGTCTCTTTGTCCACTGTAGCAC Gene GeneID:789032|ADAM21:XM_002689463:21_cdna Constitutive 0 NULL GeneID:789032 8 GENE ADAM21 NULL ADAM metallopeptidase domain 21 EMBV3_27648 AAGTCTTCTGAAAAATGGGAGGTGGGGCTGGAAGGGGGGTTGCTTTCCTTGTGAAATAGC Gene BVV0102_169321 + 0 NULL GK000014.2:68651685-68668783 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18427 GAAACCGGGGGGAAAAGCCCATTCTTAGCGAAGTGAGAAATGTCTGAATGGTACTGGCAG Gene GeneID:100301415|LOC100301415:XM_002696308:29_cdna Constitutive 0 NULL GeneID:100301415 20 GENE LOC100301415 NULL hypothetical protein LOC100301415 EMBV3_06162 AACTGAATCTGAATCTGAATGGGGCAAGGGAGGCAAAAGGAAGGGAGGTCACTCCATAGG Gene GeneID:615388|CD300LG:XM_002696037:313_cdna UTR3_Alt 2 NULL GeneID:615388 19 GENE CD300LG NULL CD300 molecule-like family member g EMBV3_05623 CAGTAGGGATGAGTTCACCAACACCTGCCCCAGTGATAAGCAGGTTGAATTAGCATACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23078 TCCCTCTTCATGTTACCTGCCTGCACTTTTGCACCCCCAGACCTGGAAGACAACCTGTTA Gene GeneID:613891|DPPA2:XM_002684749:217_cdna Constitutive 0 NULL GeneID:613891 1 GENE DPPA2 NULL developmental pluripotency associated 2 EMBV3_22301 CGCAACCAGAGGTGGAAGTGGAAGAACAATCTATTGGAGGCGACCACTCTATCAAGGTGG Gene GeneID:539857|PCDHA10:XM_002689247:137_cdna Constitutive 0 NULL GeneID:539857 7 GENE PCDHA10 NULL protocadherin alpha 10 EMBV3_31467 CTCAAGCATTTGACTTTGGATCTGCAGCTGGGTCTCTGCTTGGAGTTGTCAGCACTTCTG Gene BVV0102_450596 + 0 NULL GK000017.2:56409529-56457326 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23464 CAGGTGCCTACATGAAAGGACCAGCTGTCCAAGGTATAAACTGTACATAGCCAGTGACTG Gene GeneID:540889|PHF13:XM_002694107:421_cdna Constitutive 2 NULL GeneID:540889 16 GENE PHF13 NULL PHD finger protein 13 EMBV3_39122 GGTGACAGCTGGTATTCATTCTTCAAGGAGGCTGTGCAAGGGGCTTCAGACTTGTGGAGA Gene GeneID:505308|SAA4:NM_001040505:10_cdna Constitutive 0 NULL GeneID:505308 29 GENE SAA4 MGC133581 serum amyloid A4, constitutive EMBV3_23114 CGGCCTTGGCTAGGAGGCTGTCTTCGTTTTCCTCAACACTACTTGTCTGATTAAGGCAGC Gene GeneID:781257|MTCH1:NM_001103305:71_cdna Constitutive 1 NULL GeneID:781257 23 GENE MTCH1 MGC179329 mitochondrial carrier homolog 1 (C. elegans) EMBV3_33784 GTGCTTGCCCGGATTCTTAGTTTGGAAAAGCTATCACGTGATCCAAACAACCAGAAGACA Variant GeneID:523479|ABCA12:XM_002685565:1_cdna 508^693 1 EMBV3_31770 GeneID:523479 2 GENE ABCA12 NULL ATP-binding cassette, sub-family A (ABC1), member 12 EMBV3_40489 CTCCATGGAAAAGAACAGCCCTCAGCTGCACCATTCAACTTGTGTGTTTACTGAATGGAC Gene BVV0102_023574 + 0 NULL GK000022.2:15419260-15431073 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126191 TCONS_00126198 TCONS_00126200 TCONS_00126201 TCONS_00126190 TCONS_00126197 TCONS_00126192 TCONS_00126199 TCONS_00126202 TCONS_00126196 TCONS_00126193 TCONS_00126194 TCONS_00126195 1 XLOC_077387 Coding TCONS_00126195 XLOC_077387 Coding Coding NKTR 22:15368025-15421371 = TSS94727 7372 1 TCONS_00126195_9 1462 0.0602278893109061 17 0.862123910394601 0.000548645333817576 0.000512936018431433 0.000683567476418607 0.000371709592757462 0.000426639417358536 0.000246314730952917 0.000185091779331432 0.000494480812504692 0.00055501333417176 0.00101803068069509 0.000516565492635251 0.000252038382653933 0.000366885293204478 0.000531077468273599 0.000292254025131452 0.00816385232746562 0.00383764275986544 0.00287799173818489 0.000726813014042477 0.000383363027209106 0.000158972598364731 0.00228072233766956 0.00238498208008271 0.00177543121590201 0.00102058916856842 0.000821833131874656 0.000445730155174781 0.00128152110424075 0.000962449034254997 0.00151281395870547 XM_002696872.3 NKTR PREDICTED: Bos taurus natural killer-tumor recognition sequence (NKTR), transcript variant X1, mRNA. 0.0 1.318e+04 100.00 0.990911557243625 NM_005385.3 NKTR Homo sapiens natural killer-tumor recognition sequence (NKTR), 0.0 7867 84.12 0.97192078133478 TCONS_00126195_9 sp|P30414|NKTR_HUMAN NKTR_HUMAN NK-tumor recognition protein; 0.0 1953 89.56 0.999316005471956 1 coding 0 0 0 0 -0.00310695871159737 0.990983891283544 0.0028205452483778 0.953079109747862 GGGGGGCGGGGGTGGCGGTCCGTTAGTGGCGTTGGCCTCCGGCCGCGGTGGCAGCGCTTTCTCCTCTGTCTACTGGGAGGTCTCAGGCTGGAGGCCAACCAGGTGAAGAGCGCGGCTGCATGTGTGTGCGCACTCCATGGGAGCCGGGAGGCCTGAGCTTTTGCTGCCGCCTCGGTCGCTATGGGGGCGCAGGACCGGCCGCAATGCCACTTCGACATCGAAATCAACCGGGAGCCGGTTGGTCGAATTATGTTTCAGCTCTTTTCAGATATATGTCCAAAAACATGCAAAAACTTCCTTTGCCTATGCTCAGGAGAGAAAGGCCTTGGGAAAACAACTGGAAAGAAGTTATGTTATAAAGGTTCTACATTCCATCGTGTGGTTAAAAACTTTATGATTCAGGGTGGGGACTTCAGTGAAGGTAATGGAAAAGGTGGAGAATCAATTTATGGTGGTTATTTTAAAGATGAAAACTTTATTCTCAAACATGACAGAGCGTTCCTTTTGTCAATGGCAAATCGAGGGAAACATACCAATGGTTCCCAGTTTTTCATTACCACAAAACCTGCTCCACACCTGGATGGGGTGCATGTTGTCTTTGGACTAGTTATTTCTGGTTTTGAAGTGATCGAACAAATTGAAAATCTGAAAACTGATGCTGCAAGTAGACCGTATGCAGATGTACGAGTTATTGACTGCGGGGTGCTTGCCACAAAGTCAGCAAAAGACGTTTTTGAGAAAAAAAGGAAGAAGCCAACTCATTCAGAAGTCTCGGATTCCTCTTCCAATTCCTCATCCTCTTCAGAATCATCCTCAGAAAGTGAAATTGAACATGAGAGAAGCAGAAGAAGGAAACATAAGAGGAGACCGAAAGTTAAACATTCTAAAAAGAGACGAAAGGAAGCAAGCAGTTCAGAAGAGCCAAGAAATAAACATATAATAAGCCCAAAAGGTCATTCTGAGAGGAGTGATACCAATGAAAAAAGATCTGTTGATTCAAATGCCAAAAGGGAAAAGCCTGTGGTCCGCCCAGAAGAGATTCCTCCAGTGCCCGAGAACCGATTTTTACTGAGAAGAGATATGCCTCTTGTCACAGTGGAGCCTGAACCGAAAATTCCTGATGTTACACCCACTGTAAGTGACCAGAAACCATCTGTGTCAAAGTCTGGACGGAAGATTAAAGGAAGGGGCACAATTCGCTATCACACACCTCCAAGATCAAGATCCTGTTCTGAATCAGATGATGATGATAGCAGTGAAACTCCTCCTCACTGGAAAGAAGAAATGCAGAGATTAAGAGCATATAGACCACCTAGTGGAGAAAAATGGAGTAAAGGAGATAAGTTAAGTGATCCCTCTTCAAGCCGATGGGATGAAAGGAGCTTGTCCCAGAGATCCCGATCGTGGTCCTATAATGGGTATTATTCAGATCTGAGTACAGCAAGACACTCTGATGGTCACCATAAAAAACGCAGAAAAGAGAAAAAGGTTAAGCATAAAAAGAAAGCTAAAAAGCAGAAACATTGCAGAAGGCACAAACAGACTAAGAAAAGAAGGATTGTTGTACCGTCTGACATAGAATCCTTAAAATCTTCAACCCGACGAGTGAAATCCTCATGTGATAGAGAAAGGAGATCTCATTCTTCCTCGTCTTCATCTCATCACTCGTCCAAGAGGGATTGGTCTAAATCTGATAAGGATGACCAGAGCTCTTCAACGCATTCCAGCAGAGACTCATACAGATCAAAATCTCACTCGCAGTCTTATTCTAGAGGAAGCTCAAGATCAAGGACTGCCTCAAAATCTTCATCACATTCTCGAAGTAGATCAAAGTCCAGATCTAGTTCTAAGTCGGGGCACCAAAGAACAGCATCAAAATCACCAAGAAGAACAGCCTCTCAGTTAAGTGAAAATAAACCTGTTAAAACAGAACCTTTAAGAGCAACAGTGACACAAAATGAAAATGTTGTAGTACAACCAGTGGTGGCAGAAAATATTCCTGTTATACCACTGAGTGACAGCCCCCCTCCTTCAAGGTGGAAGCCTGGGCAGAAGCCCTGGAAGCCCTCTTATGAACGAATCCAGGAAATGAAAGCTAAAACAACCCATTTGCTGCCCATCCAAAGCACTTATAGTTTAGCAAATATTAAAGAGACTGGTAGTTCATCATCCTACCATAAAAGAGAAAAAAATTCAGAAAGTGATCGTAGTGCTTATTCAAAATACAGTGATAGAAGTTCAGAAAGTTCACCAAGGTCAAGGAGCAGATCTTCTAGGAGTAGATCTTATTCCAGATCATACACAAGGTCTCGAAGTTTAGCTAGTTCACATTCACGGTCTAGGTCTCCCTCATCTAGATCTCATTCACGAAATAAATACAGTGACCATTCACGGTGTAGTAGATCATCTTCATACTCTTCTGTTAGCAGTGATGATGGGAGACGAGCCAAGAGAAAATTTAGATCCAGTGGGAAAAAAAGTTATACCTCAAATAGAAGGCATAGCAGCAGCTCTGAAAAAGCACTTCGTAACAGATATGTCAAAGGCAGAGCCAAGTCTTCATGTCATAGAAAGTACAGTGAAAGCAGATCATCTTTAGATTACTCTTCAGACACTGAACAGTCAAGTGTTCAGGTTACGCAGTCAGCCCAGGAGAAGCAAGTCCAAATGGAAGTGAATAACAAACAAGAGAGAAACAGAGATGAAGACAAATCTAGGCCTGAACGGGAATGCCCTCATTCAAAAAAAAGAACTTTGAAAGAAAATCTTTCTGATCACTTTCGAAATAGCAGTAAGCCCAAAAGGAAGAATTATGCTGGGAGTAAATGGGACTCTGAGTCAAATTCTGAACGAGATGTAACTAAAAACAATAAAAATAGTCCCCGGCCATCTTCTGATAAGGAGGAAGGTGAGGCCACTTCGGATTCTGAGTCAGAGTCTGGTGAAATTCACATCAAAGCCAAACCCACAACTAAGTCTTCAGCAAATACTTTACTGCCTGATGGTAACAGTGCCTGGAAATCAAGCAAACAGCACTCCTCAACCTCTGATTCTGAGGAATTCTATTCCAATTCAGAAAACACTAGAGGAAAGCCACACAAGCATAAACACAGCTCAAAGGAAAATATTAAAAGGGAACACACCAAAAAAGCAAAAGAGAAATTAAAAGGGAAAAAAGATAAAAAGCACAAGACTCCAAAACGAAAACAAGCATTTCACTGGCAGCCTCCACTTGAATTTGGTGAAGAGGAGGAGGAGGAGATTAATGAAAAGCAAGTTACTCAGGAGGCGAAAGAGAAAAAGCAAGTTTCTGAGAACAGTGAAACCATAAAAGAAAATATTCCCCAAACTAAGAAGCCCTGTGAAGACAGCAGCCTTTCAGGTAAACATAGCACAACAGTGTCATCAGATATTGATCAGTCTACTAAAGATGGTGTTAAACTCAGCACTTCTCCTGTAACCGTAAACACTGATGAAAATGTAGTCCGTTCTCCCCCAAACATTCAGCATATTGAAGAGAGCATCCCAAGCGGAGCAGAGGATATGCTACAAGCAGATGACAACATGGAGATTTGCACTCCTGATCGGAGCTCCCCAGGAAAGGCCGAGGGGACTTCCCCTCTAGGAAATTCAAGGCTTGATACCCCAGATATAAGCATTGTTCTAAAGCAGGATATGGCAGCAGAGTATCCTGAGGCAGAGTTGAGAAAACAGGAAAGCAGTATGTCAGAAATCAAAATGTTGGGTGAGATGGGCAAACAGGACAGCGGCTCTGCCAGCTTGACCAGTGCTGTAGAAAGTACTATAAAGAACGAGGTAGCTGAGAAAAGCCAGACGAGCCTCGTGGATAATAAATGGAAGCCCCTGCAAGGTGTGGGGAACCTTGCAGCACCATCTGCTACCACATCCAGTGCTACGGACGTTAAGGCACTGACTGCTATGCCTGAAATGAAACCACAGGGTTTGAGAATAGAAATTAAAAGCAAAAATAAAGTTCGGCCTGGGTCTCTCTTTGATGAAGTAAGAAAGACGGCACGCTTAAACCGGAGGCCAAGAAATCAAGAGAGTTCAAGTGATGAACAGACACCTAGTCGAGATGGTGATAGCCAGTCCAGGAGTCCAAGTAGATCTAGAAGTAAGTCTGAGACCAAATCAAGACACAGAACAAGGTCTGTCTCCTATAGTCACTCAAGAAGTCGATCGAGAAGTTCCACATCATCTTATCGATCAAGAAGCTACTCTAGAAGTCGGAGCAGAGGGTGGTATAGCAGAGGCCGCACAAGGAGCCGGAGCAGTTCCTACCGCAGTTACAAAAGTCATAGGACGTCCAGCAGGAGCAGATCCAGGAGCAGCTCCTATGATCCTCACAGCCGGTCCAGGTCCTACACTTACGATAGCTACTATAGCAGAAGTCGGAGCCGAAGTAGAAGCCAGAGAAGTGACAGTTATCACCGAGGCAGAAGCTACAATAGGCGATCCAGGAGTTGTAGATCTTATGGCTCTGACAGTGAAAGTGACCGAAGTTACTCTCATCACCGAAGTCCCAGTGAAAGCAGCAGATATAGTTGAAAGTGTCCCCTTTTTTTTATATGAATTATATCTTATGTGTAAATACCTGGTAACTTAAAAAATTAAGAAACTTAATGGCAGTCTGTTGTTCTGTTTCAGTATTAGAGATGAATTTAAAAAACAGACACTTCTTAATTGTTATTTGTTTATTTACATGTGCATAGAATTTAAAATACAGATATGTCTCCTTAAAATATTTGTATGCCACATTTTACAGTAGCCAACTATGGAAATTAATTTCTTTTTCTTGAATCAAGAAATCATGAAATTTAAGTATAATTTGCAATATTATTTTAGATAGATGATTTGTCTCATATATTTCTTAGAATACAGATTCTTTTTGCCCATTTTTAAGGTTTTAGCATCTATGCTGCCCAAGCATAGAACTGAAGGAGAACTGTGAAAGGTGGCCAAATACTTCCATACCAATTACACAGTCTTATTCATGTGTGCTCTTAAAAACAAACCACCCAAAACTGATACTGATGGTAACCAGGCAGTGGCTCCTTTCTTCTTTGTTGTTTCAGAGGATCAAGAACGTGGTCATAATACAGCCCACTGTCTTATTTCAGGCTGGCGGGTGAGGTTAAAAAGAATAGATCAGCCTTAACTATAAATATCTGCACTGTCTCTGTAGCCCTAATGTTTCATGTGCTTTTTTAATAAATATTATTAGAAGTTCAGTTTGTTTAAAAAAAAAAAAAAGTTCTATTCCAGTTTATGCTCTGGTGCTTGGTAACTTTTGGTGCATTATTCTTATATATTATACATTAGAATTCCATCAGAGAGAGAGAGAAATTTTTAAAAAGTTCATTGGCACCAAGTAGGGTTCATTGTAAGCTGTATTCACTTTAACTATTTGGAGAGCTTCTCTCAAGCACAGGTGTGGGCTGCGGGCCGTGGAGCAGGCAGGATTGGCACAGGGTTGTGTAACCACTTGGGTATGCTGCCCAGAACTGATGCCTGGAAGAGTTGAATGGAGAGTGGACTTCAAAAGTAACACTAAGATCTACCTGCCACCATTTTGGACACATTTTTCAGGGCTTTACTTTAAAGCCTTTCAAGTAAGAGATGTAAGAGCAGTTGAACGGTCCTTAGCACCCGCCAGCTTGTTCCCTTGTTTCAGTGGCCTGCAGTGATGCAGTGAAACCTTGTGTGAGATGGGTAAGCCTATGACAACAGACAGGAAATCAGGGTGTGCAGTATTGCATAGATTACACATATTCAGTGTCTTGGGTGGTTCCTGTAAAAATGATTTGACCTATAAAAACTGGTGAGATTTTGTGTTTTTTTATCTTCAGTTTGAGCTTTTTCCCCAAGTGTACTTAATCACCTTAGTGCCAGTTTTATCCAGTTATGCAGAAGAAATTCATATTGGATATTTGATGCAGAAGTTTGTGCCATCCTACCCCTTGCCTGCTATACTTGGGAAGTGGGAAAGAACCCCCAGTTGAAGGGATCTAACCACCCCTGATGGATGGAGGGGTGACCTTGGATGTATTACAACCATCACCTATAAAAGGTTCATAAACAGGGTTAAGTGGCCAATTGTTTGCCAAGTTGACAGATGAGAGTACATTAGAAAGTAGGACCTGACTCAAGCAAACACTTGATGGTGAATAAAAAACAATGTGTGATTCATATGAGCATTCTCAAAAGTTGCCTGCAGAGGAGAATATTGCTTTAATAATATTCAGTGGAAAAAAACTGCATTTAGAACTCAAACCAAAACTGCCAAATCTAATTACGTTAAGAAAAGTTACCTTTAGGCAGTGTATTAGTTTTCTATTGCTGTGTAACAGATTATCCCAAACTTAGCAGCTTAAAGCAATACTCATTTCTTAGCTTACAGTTCTGTAGCTCATGAGTCCAGCGTGATACGGCTGGATTCTCTGCTCAGGGTCTCACAAGGCTGAAATCAAGGGTCAGCAGGGTGGCATTCCTTTGTGGAGGCTCTGGGGAAGAAATCTGCTTCCAGGTTAATTCAGGTTGTTGGCAGTATACAGTCCCTTGCTGGCTGTCAGCTGGGGTCCTCTCTCTCGGCTCCTTGAGGCTGCTCGCATTCCTCCTTGTGCGCTTTCCTCCATCTCCAAACCAGCAATGGCCCATCGGGGTCTTCTCATGCTTCAGATCTCTCTGCCTTCCTCCTCTGTTTTAAGGTTCATGTGATTAGATCACGGTTCATGTGTGAGACAGTGTCCCTATATAAGGTCAGCTGTGCCATAGAATGTAGTCACAGAAGTGATATATTTACAGGTATCTGGGCTTGGGGCATGAAAAGAGGGAAGGGCGTTTTAGAATTCTACCTCCCACAGGCAATAACGTTGCAGGTTGTGCTATGGGTAGAATTTTATCCTCAAAAGGTGAGCCCTAGAAGCCTCGTTTGTTTTCTCCATGGAAAAGAACAGCCCTCAGCTGCACCATTCAACTTGTGTGTTTACTGAATGGACTACAGAAATAGCTTTTCTTCCTAAAGGGGATTGTTCTGTATTTTAAATTATTTTTTAATAAAATTGAATTACATCGTGTATTGTGCTTCTTAACAGAAAATGCATTATTGGACTGTTTTTGTAATGTCCTCTTTATTGCAAATGAAACAATATAGCTGGTATTGTTCAAAAACAGTAGAAAATACTTTTGTATATATTGGCAATGTCTAATTTGTATATACTTCATTTAAATTCCCTAAAACTTAAAAGGGAGGCCTTGTAGAAATTAAACTATATACTTAGTCTAAGTTTGAGTCTGAGCATGTTTCATCCTTCTTTATGTACCAAGACTTCAAATAGTCTTTCTGAAATGG EMBV3_28777 AGGAGCTGGGGCTGCGGCTGCTGTATGCGGGCTGTGCTGAGACCTTGTACCATTCAGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42144 AGAGTTCTCCCGAACCAATTCCAAGAGGTGGACGAGAAGGCTGGAGTATGACTGATGACA Gene BVT0102_264488 + 1 EMBV3_35511 GK000008.2:23008042-23016039 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227119 1 XLOC_138170 NonCoding TCONS_00227119 XLOC_138170 NonCoding NonCoding IFNA16 8:23009779-23083535 x TSS169631 759 1 TCONS_00227119_1 61 0.13570487483531 2 0.989736289065148 0 0.000247127888691948 0.00018898157375359 1.09409153422481e-05 0.000229295371502101 1.88513974274361e-06 1.92084988868611e-05 3.11711739594167e-05 3.11862802146273e-05 0 0 0 2.07918906364264e-05 0 0 0.000260984020906571 0.000328109870813495 1.10192681098569e-05 0.000232102738650786 3.78994045700552e-05 0 0 0 0 4.25993969710222e-05 5.26012054197973e-05 9.54653312319349e-05 0 0 1.58425037479376e-05 XM_867297.4 PIWIL3 PREDICTED: Bos taurus piwi-like RNA-mediated gene silencing 3 (PIWIL3), mRNA. 8e-07 59.0 87.76 0.0606060606060606 0 noncoding 0 0 0 0 0.0242751058314843 0.877462634614576 0.032306987161299 0.527976908082623 CATGACTGAAGCGACTTAGCAGCAGCAGCAGATGGCTGAAAATCAGAGCATGTTGTGGTATGTTTTCAGATTCAGGACTGTTTCTGGGGAAAGGGGCTAATTCAGGGACAACAGGAAAGGCGTCTACAATCCGGACAGAAATCTACTCTATATCGCGACCCTCCAGTGGGAAGGAAGACTTGGGGACAAGACTGAGACTTAAAGGAGCCCCAAGGGAAAGAGAAAATTATTTCATTCAATATTAATATAAAAGAGTTCTCCCGAACCAATTCCAAGAGGTGGACGAGAAGGCTGGAGTATGACTGATGACAGCCGCCATCAATTAGGAAAAGGAAAACTAACGGTTGCTGCTAGATGCCATGTGTCACCAGTCAGATTGGCAAAATTGAAAAGGATGATAAGATCATGTTTTGGTCAATGAGTGAGGACATATAAGAGCTTATATGGTCTTGAATGTGGATTCATGTAGCCATTGTTGTCATGGACAGTTGGCAGTGTGCATGTGCAAGGTTTATGTATTTTGACCAATAAAATTGACTTCATGGCCCCGTGTTCAGACAAAGACTCTCGCTTGCGTATAAGACAGCTGCATACACTTGTAGCAGTCTCTTCTCAAAGGCACTAATTTCTGAGAAGGACCGACTCTAGGAGGTGACACTGCCGGCACTTAGGGACTGAAGTCTTCACGGAAAACAACTGGGATCAAACTCAGGACAGCCCAGGGCTGGAGAGCAGAGCCTCACCCTGCATGGCCCTGGC TCONS_00224651 TCONS_00224652 r 5' 5755 TCONS_00224663 TCONS_00224664 r 3' 3497 EMBV3_03901 GCTGATCCAGAGAGTTTAAAGCAACATGACACACGAACCATAAGCGCCATCCCCTCCTTG Gene GeneID:533634|OSBPL6:XM_002685263:70_cdna UTR3_Alt 2 NULL GeneID:533634 2 GENE OSBPL6 NULL oxysterol binding protein-like 6 EMBV3_42447 AACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGT Gene BVV0102_299130 + 0 NULL GK000028.2:8567656-8731594 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141583 TCONS_00054120 TCONS_00230702 TCONS_00049844 TCONS_00030515 TCONS_00201377 TCONS_00058345 TCONS_00173130 TCONS_00134381 TCONS_00151324 TCONS_00201404 TCONS_00124523 TCONS_00016526 TCONS_00152803 TCONS_00053123 TCONS_00201921 TCONS_00021816 TCONS_00048995 TCONS_00224665 TCONS_00053124 TCONS_00117654 TCONS_00222917 TCONS_00109090 TCONS_00058346 TCONS_00203551 TCONS_00190111 TCONS_00058348 TCONS_00177891 TCONS_00037838 TCONS_00105602 TCONS_00056469 TCONS_00238117 TCONS_00192190 TCONS_00195921 TCONS_00015588 TCONS_00034471 TCONS_00143669 TCONS_00203952 TCONS_00112864 TCONS_00154455 TCONS_00060247 TCONS_00125023 TCONS_00241430 TCONS_00156814 TCONS_00207080 TCONS_00192189 TCONS_00140800 TCONS_00195920 TCONS_00122368 TCONS_00192192 TCONS_00163708 TCONS_00192191 TCONS_00099296 TCONS_00173129 TCONS_00184696 TCONS_00129429 TCONS_00023650 TCONS_00053121 TCONS_00184697 TCONS_00206327 TCONS_00251614 TCONS_00022175 TCONS_00060246 TCONS_00164317 TCONS_00000662 TCONS_00132066 TCONS_00058347 TCONS_00209707 TCONS_00137919 TCONS_00197238 TCONS_00078439 TCONS_00135598 TCONS_00031956 TCONS_00184695 TCONS_00062751 TCONS_00066405 TCONS_00157094 TCONS_00207792 TCONS_00071277 TCONS_00072428 TCONS_00058080 TCONS_00151323 TCONS_00002733 69 XLOC_086011 XLOC_031929 XLOC_140192 XLOC_029975 XLOC_016768 XLOC_123023 XLOC_036077 XLOC_104301 XLOC_081384 XLOC_092086 XLOC_123050 XLOC_076069 XLOC_008827 XLOC_092568 XLOC_031657 XLOC_123566 XLOC_012489 XLOC_029126 XLOC_137594 XLOC_071820 XLOC_136224 XLOC_064995 XLOC_124202 XLOC_116146 XLOC_107664 XLOC_021667 XLOC_062613 XLOC_034272 XLOC_144894 XLOC_117131 XLOC_118173 XLOC_008519 XLOC_020687 XLOC_088090 XLOC_124308 XLOC_068759 XLOC_094215 XLOC_036632 XLOC_076566 XLOC_148094 XLOC_095274 XLOC_125599 XLOC_085229 XLOC_073923 XLOC_100000 XLOC_059539 XLOC_111408 XLOC_078142 XLOC_014317 XLOC_124888 XLOC_154555 XLOC_012846 XLOC_100199 XLOC_000168 XLOC_080699 XLOC_128218 XLOC_084128 XLOC_118900 XLOC_047327 XLOC_081821 XLOC_018201 XLOC_037478 XLOC_041119 XLOC_095554 XLOC_126307 XLOC_043049 XLOC_044197 XLOC_035877 XLOC_000671 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_08748 GAAGGGGCTAGAGCCAGAAATGGTGGATGTTTTTGGTAGAGCGGTCAAAGTCTAAGAATA Gene GeneID:515716|NKAPL:NM_001102498:22_cdna Constitutive 1 NULL GeneID:515716 23 GENE NKAPL MGC159917 NFKB activating protein-like EMBV3_13307 GTGACCAGCATGACACCTTCTTCCTGCGAGGTACAAATACACCTGGAAATTGGACGAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41944 CCAGTGACTATCCATCAGGCTGTCTTCTGGGCTGTGTGGACCTAATTGACTGCTTGTCTC Gene GeneID:533430|TRIP4:NM_001046351:94_cdna Constitutive 0 NULL GeneID:533430 10 GENE TRIP4 MGC137554 thyroid hormone receptor interactor 4 EMBV3_30337 TGGAGTCTTCTGGCCTGAGCCTGTGTGGGCCCCGGTTGCTGTAACTTACCTGTAAATAAA Gene GeneID:617280|ARHGEF19:XM_002685746:500_cdna Constitutive 0 NULL GeneID:617280 2 GENE ARHGEF19 NULL Rho guanine nucleotide exchange factor (GEF) 19 EMBV3_04073 AGGTGGTTAAAGCAGTATTGGAACACCAAGGCCAAAGAATGCTAAGCAGCCAGAGCGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31454 GGAAAGCTTTTCATAGCATCAAACATTCATCTGGTGCAAATGCACAGGGAAACCTTCCTG Gene BVT0102_116389 - 0 NULL GK000001.2:107834444-107879882 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001756 TCONS_00001759 TCONS_00001754 TCONS_00001760 TCONS_00001757 TCONS_00001753 TCONS_00001755 1 XLOC_000430 Coding TCONS_00001760 XLOC_000430 NonCoding Coding KPNA4 1:107833337-107837253 j TSS902 2956 3 TCONS_00001760_6 74 0.118064952638701 2 0.245466155810983 0 1.78513507404069e-48 1.29336639105045e-100 5.98154241082549e-63 7.302904789225e-08 5.54615673927421e-06 6.0050972380509e-41 2.14197602754299e-83 1.94304697220141e-50 7.12406433544546e-46 0.0010486629150229 0.000409616559567297 3.2743605968287e-06 0.00162984828532673 0.00152316312536239 0.0114759233768543 0.0105708213069744 0.0103311423004007 9.72532612547954e-23 0 1.92415048597753e-19 8.08785825322817e-29 0.00404629526798759 0.00638717090537314 3.27633156095182e-122 0 8.63376740285465e-06 1.88485575911861e-60 4.08692751845525e-23 5.98594455165048e-119 XM_005201734.1 KPNA4 PREDICTED: Bos taurus karyopherin alpha 4 (importin alpha 3) (KPNA4), transcript variant X1, mRNA. 0.0 1433 100.00 0.268267929634641 NM_002268.4 KPNA4 Homo sapiens karyopherin alpha 4 (importin alpha 3) (KPNA4), mRNA. 0.0 3254 92.25 0.740866035182679 0 noncoding 0 0 0 0 -0.153660745484142 0.348889853986597 0.0219439960777442 0.64109614310808 CAAATATGAAGACAAATAGATACAGTGGAAAAAAATTATCAAGAAATATTGATGAAGACCCTAGCCTTGTTCCAGAGGCAATACAAGGTGGAACATTTGGTTTCAATTCATCTGCCAATGTACCAACAGAAGGGTTCCAGTTCTAGAAAGATGTTGTGGAAGTTAGGTACAATGCAGCACTGGGATATATATATATATATACATATATATAAAAAGGTTTGATCCATCAAGCTTGGCTCATGGGATCTGCTGCTGCATTAAATCGGGAAAGAAAATGTGAAGATTTCATTTGGAATCACAGAAAATGCCCAAATGAGGTCAAGATGGCGAGTGGGTGCGAGTGAGAATGAGTGGCAAAATGTAATGAAAACTCTACATGGATGCTTATTTAGGTTGTTCAAAGTAAAAAGGGCTACAGGTCACAGATCTTCAGTGCCTGAGAAGGAACAATGACTTTGTATCAATTGAGGGGAAAGTGCAGTACTGTCATCTTCAAGCCTTGTAAGCATGAAAGAGAATAGGATGCCCATAAAAGTCAAAGGAAAACGAGCCCAGGCCTTGCTATGAAGCAGTGTGTGAGTGGACAGTGTTGAATGAATGTCTGGCTCAGTGATGGAGAGCCAGGTTCATCTTTCAAATCTAGGGCTCTTCATTCACGAAGCAGACTCCTAGTCCTGGAGTGACTGTGTACGAGAGTATGGTTGTGGTGCTGTATGTGAACGCATGCAAGCTTGATTTGCCTTCAGGGGGCTGATAACAAACCTAGTAAAATCATCAGAGTGAGATCATAAGTGTTACTGTACACTGGACATGAAAACAAAGACCAGTTCAGCAGCAGACATTGGTGTACTCTGCAGCCTGTGTTTTCTATTTCCCTTCCTCCCTGTTCCCACCCCCTCCTTTTTTTTTTTTTTTTTTTTTTTTAGGTTTTTTTTTTTTTTGTGGGAGTTTTTTGTTTTGTTTTTAGTTTTTATTTACTTTACCTAGTATGGCTTTTTAGTTGCTTCTCAAGTCAGAAAACTTTCAGGAAGGTTTCCCTGTGCATTTGCACCAGATGAATGTTTGATGCTATGAAAAGCTTTCCATATCATCAAAACTAATTTGTGTAGATTTTTGCATGAAAAAAAAAATCATAAATTTCCCTCAAAATAGACTGTGTTGCAGTACACAAGTTGCCATTATAGTATAAAACAGTAAAATGTGCTTTTAAAAGCCATCCTTTTCATTTTCAGAGATAACATAAAGATCTTTGCATGAGGTAAATCTACAGCCTAGTTCATTTTTAGATTTTGTTGAGTCCTGTAAAGAAGAAGAAGAAAAAAGTTTCAGTTGTGGTAGAATACCGTGCTGTGTTTAAATGTTACTTGTTTTCAAACTTTGTTTTCTATGAAAATGATATGGAAACTTCTAAAATGGAATTTGGTGCATATGTACTGCTGAATAAAGACCGATGAAGAGGTTTGAATAGATGTACAAATCAAGTAATGGTTTGAACACCTTTAATAATATGCCTAATCTGTTCAATTGTTTTAGAATCTTTTTATCTTAGATGTAGGCAGCCATGAACAATCTATTTTGAGCCACTTTAGGGAGAAAACTTTGTATTTTTAAAACTTGCATAAAAGTTATGCAAGTGGTTTTTATAAATTGGAATAATACCTCAGTTTTGAGGTTATGCACACTAAATTAAATGTGACATAAATTAATTTGTACAAAAAGAACTCTTTATAAGGTGGCTCATTGTAGGAAATCCTGTGCCTTCCCCTTTGAGCACAAGTGTTGCATGAACAACAGTTTGCTATAAGAAACATACCAGATTAGCCACCATTAGCATCTATATCTACTTTGTGTTTAAAAATCAACTGGTAATTCTGAAACACTGTAGAATGGATAAAAATTATTTTGTGATCATAACTCTTTGTTGAACTAGAGTATTTTTGCAGCATTCCTTGTCATCAAAAACATGGTTAAAGTTTAAAACTAGAAGCAGCAGAAAACTAGCTTGTAAAATTTATCCAAGTAGAGTGCAGGCTAGGCTATCTTGGGGAAATAAACATTAAAACTCAAAGCAATGTTTTACATGGGGCATGTGTGTGTGCTGTGTGCATTTTTTATATATATATTAATGTAAAGTTAGAGTACAACTCAGTGGCTTGTGTTTGCTTGTCTTTCATAAGCTTTTAACATTGACCCAACATTACAAAAGAAGTTTCTTAAATTCTTTAATTTCAGTATGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGTGACCCCATAGACTGTAGCCTACCAGGCTCCTCTGTCCACGGGATTTTCCAGGCAATAGTACTGGAGTGGATTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGCTCGAACCCGGGTCTCCCGCATTGTAGACAGATGCTTTACTGTCTGAGCCACCAGGGAAGTCCTAATTTCACTATAGATGTATTAATATTCCAACTTACTGAATTTGTTCAGCTGATGCCATCTGTGCTTCTGCTTCTTCCCTGTCCAAACCAAGATTCTGACCTACCTTCACTCCTTCAGCCAAAGTGGACTGAGAGAGACAACCTGAAATATATTTTAAGTATTTCTATTACTTCAGCATATGGCTGCAAATGATAGAGTGCACACAAAGTATGATTTTACAAATGGCATAAGTTACCAGAAGTAACATAACAGTACTCTGCATAAATCTTGTTTCTTAGTGTACAAAAACCTGGTTAAAAGTAAGCCAGTGAGGTTATAGTAGGCCAAATGATTTTATAGAGTAATTTTCTTACGAGTGCTGGACTCATATCAGCTTGATTAGTCAAGGCCTGCAGAAGAAGCTGATCTCAGAGAAGAACCTAAACTGTCGTTTAAAGGGGCTCACCTGATTAAATCAGGCCTACCCCTTATTATCTCCCTTTTAATTGACCCAAAGCCAAACTGAT EMBV3_14299 TCCTGCTGGCGTCGGGAAAACCACACGGGCCAAGGGGCTCAACCACAGGCGGACGTGCAC Variant GeneID:100301263|LOC100301263:XM_002695413:45_cdna 183^254 1 EMBV3_29092 GeneID:100301263 18 GENE LOC100301263 NULL similar to NLR family, pyrin domain containing 2 EMBV3_01707 ATCTGCTGATGGCCACACTCTCGAGTTTTATGCAGAGGCGTCGTGGTGAACCATCTTTAG Gene GeneID:539143|TXNDC9:NM_001076149:86_cdna Constitutive 0 NULL GeneID:539143 11 GENE TXNDC9 MGC140804 thioredoxin domain containing 9 EMBV3_13428 AGCACTGGAGGTCATGTGAAAAAGGGACTTTTCAGTAAAGTGTGGAACAGGTATGCAGCC Gene BVT0102_049821 + 0 NULL GK000022.2:13889469-13894728 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126158 TCONS_00126162 TCONS_00126156 TCONS_00126157 TCONS_00126159 1 XLOC_077381 Coding TCONS_00126158 XLOC_077381 Coding Coding CTNNB1 22:13842687-13893488 j TSS94712 7654 1 TCONS_00126158_4 781 0.0100600992944865 15 0.849625984251968 0.000439344660252467 7.7085245238496e-05 0.000221929571708661 0.000120564068563444 0.000243376275326973 4.33103545928826e-05 0.000331884605994241 0.000374533320739865 0.000265286971166689 0.000366895673644811 8.1454264482538e-05 1.5954328675033e-05 0.000146266902683421 0.000296210612565688 4.8637502582138e-17 0.00537641840192467 0.00512478821058223 0.00600077764951743 0.000720879204003029 0.000355652543877586 5.78063535233158e-05 0.00240516765031144 0.00199307482895008 0.00342979766132681 0.000157490688642438 0.00036773071176161 0.000281401439244105 0.000241577849174145 0.000192334921310553 0.00045844977127042 XM_005222523.1 cadherin-associated protein PREDICTED: Bos taurus catenin (cadherin-associated protein), beta 0.0 6558 100.00 0.474915077083878 NM_001904.3 cadherin-associated protein Homo sapiens catenin (cadherin-associated protein), beta 1, 88kDa 0.0 5663 94.36 0.475307029004442 TCONS_00126158_4 sp|Q0VCX4|CTNB1_BOVIN CTNB1_BOVIN Catenin beta-1; 0.0 1618 100.00 0.998719590268886 4 coding 1 0 1 1 0.370403191265491 0.245561760826057 0.0112219998214971 0.858932561504075 GCCTCTCGGTCTGTGGCAGCCGCGCTAGCCCGGCCCCGAGAGCGAAGAGCGAGGGGAGGCGGAGACGGAGCAAGGTCCGAGGAGCAGCTCCGGTCCCCGTCAAGCCGCCAACGCAGGCCGAGGACGGTCGGACTCCCGCCGCGGGAGGAACCTGTTCCCCTGAGGGTCTCTGAAGTACACCATACTACCTTTTTGAAAATCTTGCGTGGACAATGGCTACCCAAGCTGATTTGATGGAGCTGGACATGGCCATGGAGCCAGACAGAAAAGCAGCCGTCAGTCACTGGCAGCAGCAGTCTTACCTGGACTCTGGAATCCATTCTGGTGCCACCACCACAGCTCCTTCTCTGAGCGGTAAAGGCAATCCTGAGGAAGAGGATGTGGATACCACCCAAGTCCTGTATGAGTGGGAACAGGGGTTTTCTCAGTCCTTCACTCAAGAACAAGTAGCTGATATTGATGGACAGTATGCAATGACTCGAGCTCAGAGGGTGAGAGCTGCTATGTTCCCTGAGACGCTAGATGAGGGCATGCAGATCCCATCTACACAGTTTGATGCCGCTCATCCCACTAACGTCCAGCGTCTGGCTGAACCATCACAGATGCTGAAACATGCAGTTGTAAACTTAATTAACTATCAAGATGATGCAGAACTTGCCACACGTGCAATCCCTGAATTGACAAAACTGCTGAATGATGAGGACCAGGTGGTGGTTAATAAGGCTGCAGTTATGGTCCATCAGCTTTCTAAAAAGGAAGCTTCGAGACACGCCATCATGCGTTCTCCTCAGATGGTGTCTGCTATCGTACGCACCATGCAGAACACAAATGACGTGGAGACAGCTCGCTGCACTGCTGGGACCTTGCACAATCTTTCCCACCATCGTGAGGGCTTGCTGGCCATCTTTAAATCTGGGGGCATTCCTGCCCTGGTGAAGATGCTCGGTTCACCAGTGGATTCTGTATTGTTTTATGCCATTACAACTCTCCACAACCTTTTATTGCATCAGGAAGGAGCTAAAATGGCCGTGCGTTTAGCTGGCGGGCTGCAGAAAATGGTTGCCTTGCTCAACAAAACGAATGTTAAATTCTTGGCTATTACAACAGATTGTCTTCAGATTCTAGCTTATGGCAATCAAGAAAGCAAGCTCATCATCCTGGCTAGTGGTGGACCTCAAGCTCTAGTGAATATAATGAGGACCTACACTTATGAGAAGCTACTGTGGACCACAAGCAGAGTGCTGAAGGTGCTGTCTGTCTGCTCCAGTAACAAGCCGGCTATTGTAGAAGCTGGTGGAATGCAAGCTTTAGGACTTCACCTGACAGATCCAAGTCAGCGCCTTGTTCAGAACTGCCTTTGGACTCTAAGGAATCTTTCAGATGCTGCAACTAAACAGGAAGGGATGGAAGGTCTTCTTGGGACTCTTGTTCAGCTTCTGGGCTCAGATGATATCAATGTGGTCACCTGTGCAGCTGGAATTCTTTCTAATCTCACTTGCAATAATTATAAGAACAAGATGATGGTGTGCCAAGTGGGTGGCATAGAGGCCCTTGTGCGCACGGTCCTCCGTGCTGGGGACAGGGAAGACATCACTGAGCCTGCCATCTGTGCCCTTCGTCATCTGACCAGCCGGCACCAGGAGGCTGAGATGGCCCAGAACGCTGTTCGCCTTCACTACGGGCTACCTGTGGTGGTTAAACTCCTACATCCACCATCCCACTGGCCTCTGATCAAGGCTACTGTTGGATTGATTCGAAATCTTGCCCTTTGTCCAGCAAATCATGCACCTTTGCGTGAGCAGGGTGCCATTCCACGACTAGTTCAGTTGCTGGTTCGTGCACATCAGGATACCCAGCGTCGTACATCTATGGGTGGAACACAGCAGCAGTTTGTGGAGGGAGTCCGCATGGAAGAAATAGTTGAAGGTTGTACTGGAGCCCTTCACATCCTAGCTCGGGATGTTCACAACCGAATCGTTATCAGAGGACTAAATACCATTCCATTGTTTGTGCAGCTGCTTTATTCTCCTATTGAAAATATCCAAAGAGTAGCTGCAGGGGTCCTCTGTGAACTTGCTCAGGACAAGGAAGCTGCAGAAGCTATTGAAGCCGAGGGAGCCACAGCTCCTCTGACAGAATTACTTCATTCTAGGAATGAAGGTGTGGCAACATATGCAGCTGCTGTTTTGTTCCGAATGTCTGAGGACAAGCCACAGGATTATAAGAAACGGCTTTCGGTTGAGCTGACCAGTTCTCTCTTCAGAACGGAGCCAATGGCTTGGAATGAGACTGCTGATCTTGGACTTGATATTGGTGCCCAGGGAGAACCTCTTGGATATCGCCAGGATGATCCCAGCTATCGTTCTTTTCACTCTGGTGGGTACGGCCAGGACGCCTTGGGGATGGACCCCATGATGGAACATGAGATGGGCGGCCACCACCCTGGTGCTGACTATCCAGTTGACGGGCTGCCAGATCTGGGGCATGCCCAGGACCTCATGGATGGGCTGCCCCCGGGCGACAGCAATCAGCTGGCCTGGTTTGATACTGACCTGTAAATCATCCTTTAGGTAAGAAGTTAAACAAGCCAGTTTGGGTAAAATACTTTTACTCTGCCTACAGAACTTCAGAAAGACTTGGTTGGTAGGGTGGGAGTGGTTTAGGCCTATTTGTAAATCTGCCACAAAAAAAGATACGTACTTTGAAAGATGTCTTGGAACATTTGAATGTTCTCAGATTTCTGGTTGTTAGGTGGTCATGTGTGGAAGTTATTAACTTTAATGTTTTTTGCCACAGCTTTTGCAACTTAATACTCAGATGAGTAACATTTGCTGTTTTAAACATTAATAGCAGCCTTTCTCTCTTTATACAGCTGTATTGTCTGAACTTGCATTGTGATTGGCCTGTAGAGTTGCTGAGAGGGCTCGAGGGGTGGGCTGGTATCTCAGAAAGTGCCTGACACACTAACCAAGCTGAGTTTCCTATGGGAACAATTGAAGTAAACTTTTTGTTCTGGTCCTTTTTGGTCGAGGAGTTACAATACAAATGGATTTTGGGAGTGACTCAAGAAGTGAAGAATGCACAAGAATGGATCACAAGATGGAATTTATCAAACTCTAGCCTTGCTTGTTAAATTTTTTTTTTTTAATATCTGTAATGGTACTGACTTTGCTTGCTTTGAAGTAGCTTTTTTTTTTTTTTTTTGCAGTAACTGTTAGTTTTTTAAGTCTCTCGTAGTGTTAAGTTATAGTGAATACTGCTACAGCAATTTCTAATTTTTAAGAATCGAGTAATGGTGTAGAAACACTAATTCATAATCACTCTAATTGTAATCTGATAAAGTGTAACATTGTGTAGCCTTTTTGTATAAAATAGACAAATAGAAATGGTCCAATTAGTTTCCTTTTTAATATGCTTAAAATAAGCAGGTGGATCTATTTCACGTTTTTGATCAAAAACTTTATTTGGGATATGTATGGGTAGGTAAGTCAGTAAGAGGTGTTATTTGGAACCTTGTTTTGGACAGTTTACCAGTTGCCTTTTATCCCAAAGTTGTTGTAACCTGCTGTGATACAATGCTTCAAGAGAAAATGCGGTTATAAAAATGGTTCAGAATTAAACTTTTAATTCATTCGATTGTGTCACCTTTTTTTCCTTGTCATTAAGCGGTCTGTGAGGGTAATAAGTTTTCCTCAGGATGAAGTTGAACTGAGTAAACAGATAGTGACGTAATTTAAGTTGTAATGGTGGAAGAACCTTACTGCTAATAGATGGAATTGTTCTGTCAAATTTCTTTACACTGGTCCTGGGTTTTTAAAGTGCACCAAAATGTTTTAGCTTTGCACATTTAGCTGTGTAGGAGGAGAGTGTCCACCATCTTTAACTGAAGGACTCTGGGCTTACAGCCTATGGCCAAGACTCCTTCAGCCTGGCTGCAGGTATATATATAATTCTGTCCGAGTGACTAGAGGCCTCATGGTTCAAAGGCATCTCGTTCTTCGCGACATAGAACAAAGTGTGTTAGTCAGTTGTGTCTGACTCTCTGCAACCCTGTGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGGTTCTGAACTCCAAATAAGCTTCCCACCCCCAACCCCAAACTCCATCACGTGGTCTCATTCCTTTAAGGTAATAATGAAGAATTACCCACATGGATTTGGACTTCAAGCACCTTCACAGAAGTGTGACTCATTTGGAGCGGGGAATTCCTTCAACTCCACTTTGAACTGATAATTAAGATGCTTTACCTGTCGATGTTTATCTGAACATAATCAGAGCGAACTAGAATGGGCCTTCTTCCATTGCTCTCTGCCAGGTGAGCCTGTCATCCTGGTGGTAGGTCTGACAAGTTTTTAGTTCATCCCTGAGGGCAGAGTCAGTATACCTGTTAGAACTTGTGTTTTGGGGCTTTAAAAAGAGTGAAAGTGTTTGTACCGAGAGAGCCGTTTCTAATTGACTATGTATTTAAACATGTACTTAGTTCCTTGTTGTTGGATGAGGACCCTGTATAAAAGCTTTATAAATTCTTCCCTGTGGTCTAATTGGGATGAGAGGGAAAACGTGTGTGTATTTGGTGACGGGGCAGTTCTGCTTCCAGTGCGTGACACAGAGAACAAAGGCAGCACCGCACGAGCTGTTTGCAGGTCAGAGTGAAGATCTCCGTAGTGAGCTCAGCCTCTAACATCAAGAACCACAGCAGGCTGTTTTATTTAAAGAACTTTTTAAAACCAGAAGATATTTCAGAGCTCTGCCTAAAATCATCATAGTTTTGAAGTTCCATGTAGAAACTTAATATGAAGGTTAATACAGAAAGAAAAAAGAAAAGTCAAGATTCTGGAGAATGCTTCTTTGCTTCTGCAGAAAAATGGTTTGAAGACAACATTTCACAAAAATCAGAAGACCAAAGATGTGTCAGGTGTAACTACTGAATGTAATAACCTACAAAATGTTAGTGCAACAACAGAATTTTTAGCCAGTCAAAAGAAAAATTGCCAGCCATGAGTGGCTTTGAGTTTCTGAAAAAAAATCACGTGGTCAGTAATGAGTTACTACTGTTATTGGCACATGAATAGAAGTGTACACTAAGGGAGCAGAATAAGATGAAGACAATACACTTGAAAGGTAGCACTGGAGGTCATGTGAAAAAGGGACTTTTCAGTAAAGTGTGGAACAGGTATGCAGCCATTTGGATAAAATTGAAGTTAATGCAGGAAGAAAATCCATAATCAACAAAGTATAAAAGCCCACACCAGATGCCCATGTGTCTGGTAATTGCAAGAGAACAGCCACAATGCAGTAAAATACAACATTAACAGTATGGGTATATCTCAGATTGATACTAAGCAAAAGCAGGTCACCAAGGCTTGTTGTAGAAGCGTATAGGTACAAAAAAGGGTCAACTATCTTAAGCAAACCATCCACAGATGGTAAAATGAAAAAGCAAAAAAATAATTACCAAAAAAATCAGAATAGTGATTTATTACCTGGAGATGGAGGTGCATGGGACGTTTGATCCCATTGTAGTGACCGCCACTGAGCTGAAAAATAAAGCTTTTTCCATGTTGGAGGAGGTGTTTGAGACCTGAGGCTTTGATCTGGTTATTTGAATCCTTGATAGTGAAAGATCTTGAGGTAAATATGCTCTTGCAATTTTGTCTTGATTAGTGCAGTAAAAGCAGAAGATCTGCCCCGTGCTGTTGACTCCGCCAACAGAAAGCGGAGTCGCGCACTGCAGGTGTTCTGTCCTGGTAGGTGAGAACCTACTCCCTTGCTTGAGTGAACACCTGGCAAATGCGGTTAGAAAACAATGGCGGCGGGGGTGCAGGGCACTAAAGGTAGTGTGTCCTTTTTCTTAGCGTCAGATGTGGTGTCCATGCCACCGCCCCATCTGGTGAGGAAGCTAGAGGGAGGGGTGACAGGCCTCCTCTGCCACCTCAACATCATGCCTCTGAGAGGTGGAGGTCGGGTGAAAAAGGCCAGCCTTCTTCCAGGTCACATCAAGACCCTCACCCTGCCCATGTCCTGATTCTGGGCCGAGGCTGCTGTGGTTGCCACTTCCCTCCCTCTGCTTATCCAAGCTTGAGGCTGTTGGGGCCAAAGCCTCCTCACGTTTGGTGAGTCTTGTCCCCCAGCTCCAGAGCTCTCCCCAGGGACCAAGCCTCCCCCTCCCTCCAGTTCCTTCCTGAGGCTCCTACCTCACTCAGCCTAAGTCCCCGTATCAGAGACACTGACTGCTACATAGTTTTCTGTGGTTTGAGTAAGGAGAAAACGGCATTTTGCTTCAAGTGGGGGCAGAAGAGACCCAGACCTTTGACAAGAGCCTTGGCCAGCAGAGCCCCCACTTTCTGACCTGTGCCACAGGGCTGACACCTGCCCTGCAATCCCAGAACTGACTTGAGAACCTCATGAGGTGACATGGTGACCTCACAGTAATACGGGAGACATGAACAGCTAGACAAGTACCAAGAACCATAAGAAGTAAATCCTACTGCTGCTGCTTAGCTGCCAGATTCTGCCCAGGAGACCTCCCAGGCCAAAGTCACCCCAGATGTTCCCAGAGGGCCACCTCCTTGGGTGTGTGCTCAGGCTGTAAGCTGAGGCGAGGTCTCAAAGCTCGGGCCTGCCGTGAGCGGAGAGAAGGCAGCCTGTGGCCTCGCAAGTCCGCTCCACGCACGGCGTGCTGCTGATGCCTTTGCAGTTAGCTCTGTCATGCCTTTTCTCCCTGGGGCGCTCAGCCAATGGACTGTAGTCAGTTAGCAAATAGCTGAAGCTCGGAGGGGATAGGAAGGGGAGGACCAGAGGCACCTGGGATGTTGCCAGAATCCTAAGGGCCCTGATGGGTGGCCAGCAGCCAGTTCTCAGAGCCTGGGAAGCCACAAAGGGGTGTGGGCCTCCCATGCGGGGCAGGAAGGGTTACCGCCCTCGACATCCTTGCCCACCCAGACAGTTCATGTCCCCTACCTCAGCTCAGCAGTATCGGGGCTCTGGCTTTGCATAAGTGCCCTTGTGAGAAGGGACATAAAGGATCCTCTAACTCTTGGTGGACAGAAGCCCTGCTAGGGACTGTCTTCTCCCCCTGTGCCTTTCTGATATGCCTTTCCTCAGAGAAGCAAGGCTGGGGACTTGCAGCCACGCATGGTCCACTTAGCATGGTTTTGGAATGTTAAAGCTCTCCTGTTTCACCTTAAGCAGCAGAGAGTCCCTGCTCAACGCAGAAGCGTTAAGAAGATTCCATTGCTCTGAAATACCTTCTGGGAGGACTCGGCCCAGAACTCCAGGGTGGTTCCCTCAAGATCTGAGTGAAATGAGAGAACAGATTGCCTGGGCAAACAGAACTGTGCCTGTTCCCTGCAGCAGAGGGGCAAAGCAACAGGAGCTGAAGGCCAGGCCTCCATCGACTCCCTCACCCTTGGAGCACAGGCACATCCAGGCAGGCCAGGGCCCCTGGGGTGCACAGCCGGGTGATGGGTATGCTGCCCAGCAAGACTTCCTGTGGGGCCTCCTCATGTGGGCACTAGGGAGGCTGAAGCAAAAGAAACTGCCTGCTCCGGTGCAGGTCCCCCTTACACCCCAGCTACTCACAGCTCGGCTCTGGATATCCCACTGCTGGACAAACAGGCTCTGGAG EMBV3_10676 CCAAACAGCCGCATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGC Gene BVT0102_062677 - 1 EMBV3_33661 GK000026.2:40060835-40118555 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00179596 TCONS_00171161 TCONS_00132043 TCONS_00088693 TCONS_00098385 TCONS_00031871 TCONS_00099834 TCONS_00140493 TCONS_00199297 TCONS_00174545 TCONS_00025106 TCONS_00137852 TCONS_00025108 TCONS_00178137 TCONS_00226267 TCONS_00230483 TCONS_00252175 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00000314 TCONS_00056222 TCONS_00132257 TCONS_00222044 TCONS_00135546 TCONS_00174540 TCONS_00174543 TCONS_00187309 TCONS_00226268 TCONS_00164253 TCONS_00042246 TCONS_00132044 TCONS_00117782 TCONS_00171162 TCONS_00221594 TCONS_00071868 TCONS_00174544 TCONS_00174546 TCONS_00031828 TCONS_00202430 TCONS_00110376 TCONS_00233207 TCONS_00238548 32 XLOC_085141 XLOC_109368 XLOC_103753 XLOC_080693 XLOC_053479 XLOC_058631 XLOC_018116 XLOC_060077 XLOC_120950 XLOC_104638 XLOC_014669 XLOC_084061 XLOC_107910 XLOC_137960 XLOC_139973 XLOC_155116 XLOC_123974 XLOC_000088 XLOC_034025 XLOC_080738 XLOC_135353 XLOC_081769 XLOC_113357 XLOC_100173 XLOC_025624 XLOC_071948 XLOC_134908 XLOC_043638 XLOC_018073 XLOC_066280 XLOC_142689 XLOC_145215 Coding TCONS_00179596 XLOC_109368 Coding Coding - 3:99968921-99976242 - TSS134355 7321 2 TCONS_00179596_16 405 0.995082638983745 1 0 2.2899730733807e-05 2.87794733106343e-05 1.46660483268652e-06 6.61670287463767e-07 1.53646147036544e-06 6.28636240086872e-07 5.72528955562941e-06 1.21959670911563e-05 5.74881503638329e-06 0.000780002652451121 0.000524875399509416 0.000765542978596544 0.000139250951259028 0.000374871407518322 4.26007064693583e-05 0.00240846066750101 0.00195592431671475 0.00489058798563395 1.09503770484616e-05 4.87551939026511e-06 1.22570456212253e-06 0.0026724491859505 0.0033515583835469 0.00270820785064512 1.27136386568317e-06 4.52394845141639e-06 5.25248538403041e-06 0.00182989328022288 0.0018967866127545 0.0033944148952754 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2479 90.46 0.246414424258981 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 6e-08 66.2 69.48 0.0208987843190821 TCONS_00179596_12 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 2e-25 110 28.41 0.723287671232877 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACACATAAAAGGAAGAGCCAAAGCGCTCTCATGGACTCTCTCTCCTGCGTTCATGCGCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCTTAAGAGCTGTAGCATGGTTCCAAGACCCAAGAGCTGTGATGCGCTGAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACATACACTCGTGTGACATCTATGGTGCCGTGACTCGGGTTTAACCTGGCTGAAACAACCTTTGCGCAGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGCAAAACTCCCGCACTAGAAGTGGAAAGCGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACTGGGACAGTGAAAATAGAACTCAGCAGAAAGCTCACGTGGCCCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGTAAGAGGTCCTTGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCATTTCTTGTTTCCTCAAACCTCCCACAAACAGGCAGGCAGCAGGGGAACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGGTGGGGGTTCTTCTGTCCTTTATCCTGTGCCAAGGATCAGACCAATAAAATTATGAGGACCGGTCAGATATTTAGCAAATCTTCCAGTGGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCTGGCTAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAAATTTGTTAGGATCCAGAGAGAAGCCACCCTTCAGGGTGTGAACTGTTGGCAAGGTCAAGGGCTGGGGCCATGGAATTAGGCCGGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATAAGTGAGAGGACCATCCCAGCCATTGGGGAACCACCCACTCATCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTAGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACACTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCTCTTCCCTCCTGTTTCATGCTCTTTTCCTGATCCCCATCCAGACCCACAAGCCTGCCTCTACAATCTTCTGGAGAGACAACCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGGATGCCCAAACTCCAGTCCGGGGGGGTCCCAGGAGGTCATCACACCTTGACCTGCCTAGAGATCAGTCTTCGAAAGGTTGTCACACCTTAACCTGTTGGGGATCCTCTAGTCCGAGGGGTCCCATGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGCCATCACGCCTCGACCTGCCCGGGGATTTGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTACACCCTGACCCAGGGACACCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAAAAGATTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAACCTATTACTCGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCATTGCCTTTCTGGAGAGGTTAAAAGAGGCACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGATAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGACAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAAAAAGAGACAAGGCATGCTCAGATGCTGGCCGCCCTCCAGAAAAGCCCTATGGCAAACCCAGAGTCCTTGAAGGACAAGGCACAAGACAAATGCCTAATCTATAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGCAGCACTCTGCCCTGGGGACCCAAGAGCCTCAAGGTCAAGAGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGTGGCCTGCTCCAGCCAGCCCGCCAGTCACAGATAACCATCACGGGGCTGGAGCCAAGAGTGCACCTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTCCAGGAAAAGCAACTACTAAAAGATTGACCTGAGCACTTCTTTGTTGCTGGGATGGACAAATTTTCCCATCAGTTTCTGGTGGTCCCTGAGTGTCCTACTCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAATCCATTACACCTTCAATAGAGAGGGGCCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGCCCACCAAGCTGAACCAGTCATCATTATCCTCCGAGACCCTACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGGCTCAGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGTTTGTGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGAAAACAGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCTATCCCACAGTACCCAATCCCTACGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACTACTGGCTAAAGAATCCCAATATCGTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACACCAACAGATGACTTGGACGGTATTACTTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGAAAGGCCCTTAGCCAGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGTACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCAAAAACAATTGCGAGCTTTCCTGGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGATGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGTCTGTAGCTTACTTATTCAAGAGGCTCGATCCAACTTCCCAAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATTGGAGAGGCCATTTATGGATGTCTGATCAAAGAATTCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCAGGTATGCAGTAGTCTCCAATTTTGAGACCACAGAGGCTAGGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAACTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATATCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCAACTCTTGGAGGCAGTCCATCTGCCCACTGAGATTTTCAGTCTCCCACTGCAAAAGACACCAAAAAGGGAGCAGGGAAGTGACACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTAAGAGACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATATCGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCTTCCAAATATTACTAGAAAGGTCCTTCAGAGGAACAGGCGTCCAAACAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACATGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGACATATACATTCACAGGATGGATTGAAGGCTTTCCCACCCAGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCTAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGTATCGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAAGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGCATTGCCTCTGAGGAACAGGTTGGTCTTAGTCCTTATGATATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACACTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAGCCCACATGGAAGGGCCCCTACCCTGTAATACCTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGACACCTATTCAGAACTACCAGTGAGTGCCTTCTAATGAACACCCCCAAAATCTGGTTTCTGGGTATAAAATTTCTCAGGATAACCCTAAAGAGCCAACACAGCTTGACAGATACTGTACTCCAAAACAGAGAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCCATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATACAAAACTACAACTGACCACGGAAAATATCACACACCCTTGGACACTGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAAGGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGAAAGTAGCCAGAAAGACCTCGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATTTCTTGAGGGGGGAATATTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCAAGGACCAGAGTGAAGACTTCAGGTAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATTAAAAGGAAGAGCCAAAGTGCTTTCTCATGGACTCTCTCTCCTGCGTGTGTGCGCTCTTCCTCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATACAGCTGTAACACTGATTTACTTAAGAGCTGTAGCATGGTTTGTCCAAGACCCAAGAGCTGTGACGTGCCAAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGTAGGAAAGTAGGATACATGTTTTGAGTAAAAAAGGATTTTTATGCATGGCTGGGCTGAGATTAGGTTAAACTTATTCAGGTAAATGGATTTTGTTATTAAAAGTAGACTGGTGCAGGACTAGATTTGGTTCCTCTATTCTAAGAGAACATGTTTACTTAGAATGCTGCTTTTGATAAGATTGTATGAACTTGCCTTTAAGTGATCTGTATTTGTTTTTAAATAGTCACAGTGACCTATGATTCTATCTGACCAAATATTTTTAAAACTTTTTGATATTTTTTATGCACTTCCTATCAAATTCTAATTAAAGTTCTTTTGACTTCAGCTAGCTTGGAGATGCTTCAGAGGGCCCTTCAGAAAAAAATTTAATATAATTTAAAACTACATATATTCATATTAAACTGGCTAGAATTGGTTGATATGTTAAATTACACAGAAGTCAGTGAATGATCAGCCTCCTCAGATTATATGTTATGAATAAATTTTATTAATACAGACATTCTAGAAACTA TCONS_00174208 . 5' 11514 TCONS_00174208 . 5' 11514 EMBV3_11586 AAACAAAAGTATCAAAAACTCATTTTAATGATGATCATTCCTTTTCTCTGAGCTGTCGAT Variant GeneID:768227|DNAJC24:NM_001078102:71_cdna 163^370 2 EMBV3_08297 GeneID:768227 15 GENE DNAJC24 DPH4 MGC142938 ZCSL3 DnaJ (Hsp40) homolog, subfamily C, member 24 EMBV3_24400 TGTACACTCGTGCTGTCGTAGCTTGCTCAGTGTAGATGCTCCCATTGTATCAAATTGCCA Gene GeneID:509694|USP22:NM_001166567:6_cdna Constitutive 0 NULL GeneID:509694 19 GENE USP22 NULL ubiquitin specific peptidase 22 EMBV3_05187 AATCAAAAACACCACGTACACATTTCCTTCTCGGGTGATGTGAACCCCTAAGGGGGTGGC Gene GeneID:538666|MGC139309:NM_001076118:46_cdna Constitutive 1 NULL GeneID:538666 1 GENE MGC139309 NULL hypothetical LOC538666 EMBV3_29877 GTGGAGGCAACAAGTCACATATTAGAACCCTTATGTTAAAAGGTCTCCGCCCATCTCGAC Gene GeneID:100337127|LOC100337127:XM_002686329:114_cdna Constitutive 0 NULL GeneID:100337127 3 GENE LOC100337127 NULL TNNI3 interacting kinase-like EMBV3_37199 CCTCTGCTACAAGGAGGACCTGAGCAAGAGTCCCAAGACCATGAAGAAGCTGCTGCCCAA Gene GeneID:524352|ARHGEF7:XM_002691992:90_cdna Constitutive 0 NULL GeneID:524352 12 GENE ARHGEF7 NULL Rho guanine nucleotide exchange factor (GEF) 7 EMBV3_09895 GCTGTCCAGAGCGCTGTCCACAACAGCCAGACCCTGGACCACCTGGCTCCCCTTCCGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36789 GAGATTCCTCGCTGGATCAATCGGCTTGCCTACTTCAGCTCCTGTATACCTTTTCTACAG Gene GeneID:519650|PPPDE1:NM_001100384:50_cdna Constitutive 2 NULL GeneID:519650 16 GENE PPPDE1 FAM152A PPPDE peptidase domain containing 1 EMBV3_34251 CTAAAGAGCACTAATTTATCCTCAGAGACCCTGAAGACACCCCTTCCCCAGGGTTTGTAG Gene GeneID:787451|ZIC5:XR_084570:64_cdna Constitutive 0 NULL GeneID:787451 12 PSEUDO ZIC5 NULL similar to mCG123224 EMBV3_23951 GGAGGAGCGAGAACTGCAGGAGGTGGAGAGCGCCAGAGGAATTGACAGTGATGGATTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14294 GAGGAAGCTCTTATCCAAAGGGTCTTAGACCGGTCACTTCTGGAATACGTGAATCACTCG Gene GeneID:519541|RNF125:XM_002697685:190_cdna Constitutive 0 NULL GeneID:519541 24 GENE RNF125 NULL ring finger protein 125 EMBV3_01349 AGGACTGTGGCCGTTTCCCAAACATTCGTTTCTACAGATGACTTGCTGGACTGCTTGGTG Gene GeneID:513211|HSPBAP1:NM_001014911:56_cdna Constitutive 1 NULL GeneID:513211 1 GENE HSPBAP1 NULL HSPB (heat shock 27kDa) associated protein 1 EMBV3_31844 GTCACCCTGACAGTACCTGTTGTCATTTTCCCAATCCGGAGTTCCATAACTCATTTGCTG Gene GeneID:338044|SLC38A2:NM_001082424:58_cdna UTR3_Alt 2 NULL GeneID:338044 5 GENE SLC38A2 NULL solute carrier family 38, member 2 EMBV3_05521 GGCAAAGAAATTGAATCTGAAATGGCCAATGAATAAGCCAAGGCTTGGAATAGAGTGCAG Gene BVV0102_070552 + 0 NULL GK000013.2:38317486-38359727 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00949 CAGGCGCACATCGAGGTCCAGCAGCTGAAGGCATCAGTTAAGAACTATGAGGGAATGATT Gene GeneID:539043|ODF2:NM_001038180:172_cdna Constitutive 1 NULL GeneID:539043 11 GENE ODF2 MGC134075 outer dense fiber of sperm tails 2 EMBV3_09829 TTGAGAAGTTTTTCCAGCATGGGCACCTCCAAAAGCACATGGCAGGTCACTCTTTGTTCC Gene GeneID:523338|ZRANB1:NM_001101114:36_cdna Constitutive 0 NULL GeneID:523338 26 GENE ZRANB1 NULL zinc finger, RAN-binding domain containing 1 EMBV3_28518 GAAAAGGCCGTGTATGTGGACGAGAACCAGCGCACCTGGCTGCCCATAACCATCGAGATA Gene GeneID:506540|TCL1A:XM_002696765:436_cdna Constitutive 1 NULL GeneID:506540 21 GENE TCL1A NULL T-cell leukemia/lymphoma 1A EMBV3_37942 TCTCCTGTCCACGACTCCTATGGAAAACAGGGTGGACCCATGGGAGTGCTACCAGGACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15362 CAGTTCTTTTGGCCAGCGTGTGTGTATTTGTGCATTAATGGTCCTCATCTGACTATTGCC Gene GeneID:767901|RNF146:NM_001076980:1_cdna Constitutive 0 NULL GeneID:767901 9 GENE RNF146 MGC127105 ring finger protein 146 EMBV3_34111 GGAGAGCATTGTCTCTCCTGCGTTTCCAGGGGCATCTCACATTTACATTTATGGTTTGTT Gene BVV0101_027475 + 0 NULL GK000007.2:14107547-14119737 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09124 GCTTGCCACGGCAGCCAAGAAGAGTTGCAGTACGGTTTGCTTCAAGGATGAAAGGACGAA Gene GeneID:100296569|LOC100296569:XM_002699686:4_cdna Constitutive 0 NULL GeneID:100296569 X GENE LOC100296569 NULL hypothetical LOC100296569 EMBV3_29887 TCTTATCACTGTGGAGGGCAGGAGGGCCTGACCATCTTCCCAGTCAGGCGGATTCCAGAA Gene BVT0102_137787 + 0 NULL GK000012.2:77024111-77032459 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035701 TCONS_00035704 TCONS_00035705 TCONS_00035699 TCONS_00035698 TCONS_00037335 2 XLOC_020980 XLOC_021358 Coding TCONS_00037335 XLOC_021358 NonCoding NonCoding - 12:77025047-77027992 - TSS26961 2150 4 TCONS_00037335_2 43 3 0.270720108695652 3.59523076815039e-186 2.26644177288418e-274 1.19815173603869e-23 5.94482436952116e-05 3.55727265005698e-322 0 0 0 1.69568938954087e-110 0 5.10988655729806e-224 8.11193016861574e-128 1.66941006436338e-80 0 0.000167175567865397 0.00493079965876197 4.22188730229256e-21 0.00889578170492723 0 2.70979758368745e-05 9.08358318543587e-06 0.00428458320556028 0.00421249165126325 0.00148928249553702 1.76574428435088e-185 0 3.21461848438821e-52 0.000553173495977613 3.03825526887956e-65 0.000485589273039574 NM_006260.4 DNAJC3 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 3 (DNAJC3), 0.0 693 73.00 0.55953488372093 0 noncoding 0 0 0 0 0.0189803357983404 0.884192452998441 0.0544277614266417 0.264500446571848 TTGCAACAGGTGGTATATATGAAAAAGAAAGCTACTTTTGTTTGCAGCTAGAAATTTGAGATAAGCAGCAGTGTCCACCCAACCCCCTTTCAGAACTTTAACAGAAATGTACACCTTATGGTATAAAAGGGAAGGTCCTCAAAGCCAGCCTAAGAGTTAGATTTTAATGGTACTGAAAGTGAAGGACTGGTCACTCATTAAGGCCTCGCTGTCCTAGATTTTAATCATTTCACTTTTTGAGCTCTTCCTTCGGCTCATGACAAGCCAGAGCCCTCTGTCACCTCAGTTGCTGACTATGTATAAAGCAAAGTTGGAAAATAGACTCCTCCAAAAGACTGAAGGCCAAAAGTACTCATTTGACCATAAATATTTTTATTAAATGTGAAAATACACGGGCATAAAAATAGTACCCATATTTGTAGACATGTCTGAGACCCATTTCCATTAATTTCCGGAGTCTTATTTATTAAAACACTAAATTGAGATGGATTAAGTTGTACTTAGTTTTGTCTCATTCAGACCAACTACAGACTTAACAGCAGGAGTAATATTTTAACTCATCAGACATCTCCACTTCTTGCCTCCTCTATGCTCTGCTTTCCACTGCAGGTAAGAGGCTCAAATACAGAGGGTGTTAAACAAAACCCGTTTACTATACGTGAAGCCACGCAGTGGCTAATTTTACTCTTAAATCATTCAGCAAATGAGATCATCCATTAATCAAATTATCTCCACCTATTAACATCATTTGCAATTACAGAATAAACTCTGCTACTAACAAAAAGGGAATGATCTGATTTAGAATAATTGTTGATAAATCAGCATTTGCCACCCTCTTTCCTTTATAAATATGGAAAAGTCAACTACATTCAGCACAGTGGCGTGCATTTCTCTAGGTTAACCACGCATGTGTCCTCAATGAAAACTGCACAGGGCTGTCACGGGTGCCCTGTCCCTTTAAGGAAGCAGAGACCTGGCTGAGGGGCATCTTGTGTCCTTTTTTCATGGTAAATTTCACAACTTACGACCAATTTCATGCTCTAAAGGTGAAATCTTTCATTTTTCCACCATGAATAGAAAATGATGCCAACTTAAAATTGTTAGCTTCCTCCCCACCTCCACACTCAGTTATAACTATAGTCTTTTTCTCTTAAGCGGTGGGTAGTTTTGACAATTATTAGAGTCCCAAAAAGTTCTGTTTTCATACTGATACTTGAACTTTTAATACTGCCTAAAGAGCAAAACGTTTTAAAATTAGTGCTGTTATATCCAATTGATATTAGTAAACTGTTGAAGTCGTTTTCCAGTTTTCATTTATCCATGGAAAAAAGCACAAACTTTCAGAAATGGGTATTACATTAATTTAGTTTCTTTTTAGACTTTTTTTCATGTTTATAGGCTGATGTGTTTAACACTTGTTGCTGTGGAAAAATACCCATTTACCGACCAGCGACACTTCACTTCTGGAGCTCACTGAAAAGGAAGGGAATGTGACATTCAAGGCCGGGCGCCCCTCTCCTTTTGCTTTTCCACAAAGAGCCGCACAGGTTACCGGGCACCTGTGGTCCCCAAACCAGAGCCTGGAGAGTGTGACGCTCCTGCATCAGGCTGCCAGGACGGACAACTGTCCCTTCTCGCTCCCAGCACTCTTATCACTGTGGAGGGCAGGAGGGCCTGACCATCTTCCCAGTCAGGCGGATTCCAGAAGACTACTGATGACCCTCAAGGCTGGAACTGAAAAGTCGTTATTTTCCTCACTCATGAGCAAAAACAACAGAATCCAGAGAATTTCTCTCCACGGTGTTGGCACCTGGCACCATACCTGCTTCTGTCTTCACTGAAAACAAGCAACTCTGCAGAGTTCCCTTATGACAAGTCTGCATGGTAAGACTTCAGGAACGGGATTTATAGTTCTCACAGGTGAAGAAAAAACAGAGCAAACCCTCTCAGTAGCAGGATGGCAGTCGGCGAGTGACAGGTGCCCAGCACAGTGACCCACATGGCCCAGCCCCAGCCACCCTGACCCCTTCAGGTGCCTCCTTGCTGGCAACTTTACATCCTCTCCTCCAAACGGAAGGAAAAAATTATCCAGCATATAAAGACTGAATAGTTTCATTTTTCTTAAAAGAACTTCCAGAGGCATCAAGGTC TCONS_00035704 TCONS_00035704 TCONS_00035704 r 5' 0 TCONS_00035704 TCONS_00035704 TCONS_00035704 r 5' 0 EMBV3_04441 AGTAAAGCGTCTCCTGAGTTTCGGGTCTGTCCGTTTCTATTGGTCGGGGAAGGCCAAGAA Gene GeneID:100335258|LOC100335258:XM_002697135:85_cdna Constitutive 0 NULL GeneID:100335258 22 GENE LOC100335258 NULL hypothetical protein LOC100335258 EMBV3_41069 GTCCCTGATGATATGAACTCCAGCAAACAGAGCAGCAGAGAGAGGACAACCACCAATGTC Gene GeneID:512544|ADAMTS8:XM_002699252:278_cdna Constitutive 0 NULL GeneID:512544 29 GENE ADAMTS8 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 8 EMBV3_30582 TGTGGCTGTGGCTATGGATGTGGCTCTGGTTATGGCTCTGGCTTTGGCTACTACTATTGA Gene GeneID:785259|LOC785259:XM_002684624:118_cdna Constitutive 0 NULL GeneID:785259 1 GENE LOC785259 NULL hypothetical LOC785259 EMBV3_27573 TGTCATGTGACCACGCGGACTGTATGTGGGTGCGAGGGACTGTTTGTGTCCATCTTGGTA Gene BVT0102_153674 - 1 EMBV3_07487 GK000007.2:22196830-22243651 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216086 TCONS_00216085 1 XLOC_131163 NonCoding TCONS_00216085 XLOC_131163 NonCoding NonCoding - 7:22197425-22198299 - TSS161248 874 3 TCONS_00216085_4 89 0.263157894736842 1 0 0 0 0 0 0 0 0 0 0 3.29671898501205e-05 2.61920477714538e-06 0 0 0 0 0.000966139934206759 0.000272492191897667 8.61244981485788e-05 0 0 0 1.29192025828532e-11 6.84053295976437e-05 0.00107408301149026 0 0 0 5.49495170745133e-05 9.26598698185938e-05 0 XM_005209026.1 DIRAS1 PREDICTED: Bos taurus DIRAS family, GTP-binding RAS-like 1 (DIRAS1), mRNA. 0.0 1577 100.00 0.998855835240275 NM_145173.3 DIRAS1 Homo sapiens DIRAS family, GTP-binding RAS-like 1 (DIRAS1), mRNA. 6e-54 215 69.78 0.573226544622426 0 noncoding CTTTATTGCAGGAAGACTATTTCTAAAGTGAATGCTACACAGACCCCACAACGGGGGGCAGGGGGACACCCACATGCGAGGGGGCAAAGGGGCAGGGGCGGGATCACAGCAAGCATGGCCTGGCACGGTCCCCAGAACCCCTCTGTCCCCCAGGGTCGGGGCAGGGCCTGGGGCAGGAGAGGCCTGGAGGCGGGCAGGGCCCCAGGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCTGCAGACCCCCACCCAGCCCCACTTTCTCTGGCACCTTCAAGTGGGAGGGGTCAACACCAGTTGCTGTGGGCCCTGGACCCACCACAGGCCAGGGGGGTTCAGCTATACCCAAATAGGATGTTACCTGTTCTTCCATGGGCCTGTCCACATGCCGGGCAGTGACACACACGTGCATATGCACACACACAGTGTACCCAGTAAATATTTGCGGAATGAACAGCCACACAGACGCAAGGGGAAAAAACACACTGCTACCAAGATGGACACAAACAGTCCCTCTCACCCACATACAGTCCGCGTGGTCACATGACAACAGCCACAGGGCCTCTCTCTCATATGTGTGCATGCACACACACACAGACACACACACACACACAGCTTCCTCACACCATGACACCTCATGACACCTCATGACACCAGTGCTGCTAAATGGCTCCAGGGAGAGGCCCAGGAGGCAGGCAGCTGAGACCCTCCATCCCAAGACCACAGGCAACTGAATGCTGCCCACGAGCACATGAGCTGGGATGTGGGTCCATCCCTGGTCATGCCTTCAGATGAGGCCACAAATGCATGCTGTTGCAAGTTGCTGAGTTTGTGGTCATGTGTTCCCTAGCAACAGCTGATGGATAC TCONS_00212473 r 3' 311 TCONS_00212473 r 3' 1184 EMBV3_16949 AAAGCCAAAGACTGCCCTTCCTTTGAATAGTCCTGTGGGAGTAAACGGGGTCCTGGCCAT Gene BVV0102_243785 + 1 EMBV3_05027 GK000005.2:70178440-70237678 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27060 AAGGAAGCAGTGCTCTTTGAGCCAGGACATAAAAAATGCAAGGAAAACCAGTCTGCTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34178 TGTCCCGAGTGAGCCCTCCCCACCCTGACCGTGCTAACTGTGTGTACATATATATTCTAC Gene GeneID:510586|PEA15:NM_001075456:263_cdna Constitutive 1 NULL GeneID:510586 3 GENE PEA15 MGC139825 phosphoprotein enriched in astrocytes 15 EMBV3_40367 TATGCCAGTAGCTCCAACACAACCATCAGAATGTGAAGCCCATGTCTTCTTCCATGGCCC Gene GeneID:782774|P2RY13:NM_001098152:71_cdna UTR3_Alt 1 NULL GeneID:782774 1 GENE P2RY13 NULL purinergic receptor P2Y, G-protein coupled, 13 EMBV3_27206 TGGTTGGATATTTAGAGGACATTATCATGGATTTCTTTGGTAGAAAAGTATATAGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11623 ATTCTGAAGTCTGGCACCATTTGCCCTTGTGACGTAGTTGGAAGTGTTCGTACCACTGGC Gene BVT0102_278048 + 0 NULL GK000012.2:89542887-89549558 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36491 GGATCCCAGAACGAAGATGAACCCAAGCAGTGGATCTGGCTCACAAAGTGAACGTACAGC Gene BVT0102_117118 + 0 NULL GK000008.2:105745283-105841515 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234250 1 XLOC_143729 NonCoding TCONS_00234250 XLOC_143729 NonCoding NonCoding - 8:105760419-105761204 - TSS175754 785 1 TCONS_00234250_3 96 0.407643312101911 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000824827791230213 0 0 0 0 0 1.19580932878482e-10 0 0 0 0 0 6.18419646368446e-06 0 NM_001075121.1 EEF2 Bos taurus eukaryotic translation elongation factor 2 (EEF2), mRNA. 6e-15 86.0 78.38 0.137579617834395 NM_000351.4 STS Homo sapiens steroid sulfatase (microsomal), isozyme S (STS), mRNA. 4e-17 93.3 73.44 0.240764331210191 0 noncoding 0 0 0 0 -0.021750168345258 0.86563848615544 -0.0052422740330348 0.911807991243496 TGGGGATCAGTGGATGGAAAATAGCTAAGAAGAAATATCAGAAGTAAGGCGATTCTGGCTAATAAGATCTAACAGGCTTCTCACTGAAGGCAGGCCAGGGTGATTACACATCACCTGGGAAGTGGTGGAGGATAAAGACCTGACCAAATGTTGAGAGCCATCAGACATGGAGGATGGAGGAGTCTAGCTAAACTGACTTGGCGGTATTCCTGTTAAAACAGGGCAATGCAAAGATGAACACTGAAGCTCAAAACTCAAAGCCTGCTTGAGAGGACAGTTCATAGGAGCCTGAATAGAGGTGGCTGAGGAGGGAATCTTTGTCATTTGCTCATGCTGTACGTTCACTTTGTGAGCCAGATCCACTGCTTGGGTTCATCTTCGTTCTGGGATCCCATCTGGCCAAGCCTCGCCTCTCTCTGAGTGCTAGCTGGTCCACCAAGGTGGGGGCGCTGGGCGGGGAGGACTGCAGAGCGTGTGCTTTGGTGCCTGCGATGTGATGCAGCATGTAGATGGCCTTGGATGGGCCCCCGCGCTGCGCCGGGCACTGCGTCTGCACCGCGTGCTGACCGCCTGGAGCCCGTCTACCTGGTGGAGGCCCACTGTCCACGAACAAGATGGACCATGTCCCGGGGGTCTCCCAGGTGGTCGTCACCACCGTGTTGGTCATGAAAGCTTTGCTGGCTGTCATGAGTCCTCTAGCTTCTCCACTGACCTGAGGTCCATATGGGTGGCCAGGCCTTACCCCGCAGTCCACCGGACACTGTCACACCCTGGCCGCACACCCC TCONS_00229019 . 5' 15138 TCONS_00229019 . 5' 15138 EMBV3_39882 CAGTTTGCATTTACATGAAGCAAGGGGACCAGTATAGTTACTTTATCTAGCCTCTGAGTC Gene BVV0102_362703 - 1 EMBV3_14605 GK000004.2:40345592-40432981 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13290 TGACTACTCCATGGGTCGCAGAGAATCCGATATGACAGAGCATGCAGGCAATGGAAGAAA Gene BVT0102_443722 + 1 EMBV3_22389 GK000013.2:78747537-78766067 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43050 GTGCTGAGGCAGAGAGTCGACTACAGTCCTGCAAAGAAGCTGCGTATCTGGTTCGAAACA Gene GeneID:617777|SHE:NM_001098140:233_cdna UTR3_Alt 2 NULL GeneID:617777 3 GENE SHE MGC149000 Src homology 2 domain containing E EMBV3_25523 GGAGTTCAAAGGCCACTTCTCAAGCAGCTTTCGGCACCTTCAGCCTCAGAATGGAATCTT Gene GeneID:782444|TRIM8:XM_002698455:466_cdna Constitutive 0 NULL GeneID:782444 26 GENE TRIM8 NULL tripartite motif-containing 8 EMBV3_11606 GACCCGACTGTGAAGCTACCTGCAGTGAAAAGCATGTTCTTAGGGAATCTCTGATGGCAG Gene GeneID:507180|PHF5A:NM_001083382:147_cdna Constitutive 0 NULL GeneID:507180 5 GENE PHF5A MGC142755 PHD finger protein 5A EMBV3_26335 CCTTGCTAATCCCTGCCAATCCCCACTCATCTCTTAGTTGCTTCCTAAGCAACTTTTGGC Gene BVT0102_424752 + 1 EMBV3_19537 GK000004.2:108192985-108219035 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190111 1 XLOC_116146 NonCoding TCONS_00190111 XLOC_116146 NonCoding NonCoding - 4:108195673-108199089 - TSS142479 3416 4 TCONS_00190111_3 82 0.740339578454333 1 0 0.000792552587039299 0.0006273030708837 0.000296637962289436 0.00084105390541895 0.000164886000413121 0.000168590400423167 0.000268839230333532 0.00057043900605079 0.00012621186588206 1.44537318602341e-05 0 1.04674527603691e-07 0 0 7.9791227539124e-08 5.1759611806681e-05 2.16006894392452e-06 2.22022666535777e-05 0.000430938823965445 0.000884753429938595 0.000129302833516733 9.34771342378476e-06 1.46601346041448e-05 2.8197140848282e-05 0.00051846369594557 0.000622368634463144 0.000388555388723712 1.8745516558615e-06 7.10568447870655e-07 6.29547497543382e-06 XM_592211.6 EGFR PREDICTED: Bos taurus epidermal growth factor receptor (EGFR), 4e-164 583 91.91 0.118852459016393 0 noncoding 0 0 0 0 -0.0392248241823145 0.766404330697077 0.044895462055661 0.520757213593031 CTTCCCCCATTATCCTCTACGCACAACTTAAGGTATAAAAAGTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCAAAACTTGGTCTCCCCATGTTGCTCTCTCTCTCACTCTGGCTGAGTCTCCATCTGGAGCGTGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAACATCCGACTGGGGAGGCCTCAGTGTCTCCTCTCTTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCCTTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTGTATTACTCTTTATATCCTTAGTTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCTACGCCGTCTCTCCTTCAAATACCCTGGATCAGCCGGGGCTGGACCCCAGCAGCTGAGCACTGAAGAATTGATGCTTTTGAACTGGGTTGTTGGAAAAGACTCTTGAAAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAGACCAGTCCTGGGCGTTCATTGGAAGGACTGATGCTGAAGCTGAAACCCCAATACTTTGGCCACCTCATGCGAAGAGTTGACTCATGGGAAAAGACCCTGATGTTGGGAGGGATTGGGGGCAGGAGGAGGAGGGGACGACAGAGGATGAGATGGCTGGATGGTATCACCGACTCGATGGACATGAGTCTGGGTAAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTTGCAAAGAGTCAGACACGACTGAGCGACTGAACTGCACTGAACTGAACTATTATATTATCATGTAGAGTAGTTTACCCCCCTAAAAATCACCTCTTTCTTCCTCCCTCCTTGCTAATCCCTGCCAATCCCCACTCATCTCTTAGTTGCTTCCTAAGCAACTTTTGGCTTTTCTAAATGTCATATGGTTGGAAATATAACGTATGTAATTTTTTCTCACATTGGTTCCCTTCACTCAGTTGTATGGATTTAAGTTTCCTCTGTCTTTTTTTATTTTTTTCTCGATCATTCATTTTAGCACAAAGTATAATTCTATTGTCTGGATGCACTACGGTTTATCTGTTTACCAACTGAAAGACATCTTGATTGCTTCCACATTTAAGGAATTATGAATTTAACTGTTTTCAACATCTCTGTACAGGTTTTTGTGTGGACATAACTTTTCACATCCTTTGGGTAAATACCAAGCAGTGTGTTTAATAAATTGTCAAACTGCCTTTCCAAGTGATTGTACCATTTTGCAATGAATGAAAATGAATTCTCCTCACCAGTACATGAAAGTTCCTGTTGATTCACATCCTAGTCAGTGTTTGGTGTTATTTCTATTCTGGAATTTAGCCATTCTACTGAGTATAGTGATATTTCATTGTTGTTTTTTTTTTAATTTGCATTTCCCCAATGACAGATATGTGTTTTTCATATGCTTATTTTCAACCTGTATCTTTTTTGCATAGGTGCCTATTACAGTTTTTATCTATTTTTAAATTAGGTTGTTTTATTACTATTATGTTTTGAGAGTTCTTTGTAAATATGTATATTGGAATCCAGTCATTTATCCTATGTATGCAAAGATCTCTGGTCTGTGGCTTCACTTTTTAAATTTTTACTAGTGTCTTTCACAAAGCAACAGTTTTTAAATTTGATTAAACATATCGACTTCTTTAACATGAAGATGTTTGATTTTCAGTTCAGGGTTGTCATTTTGTATTTTGGAGGGAGGAAGAGTGGATAGTTCTTCTAAATCTCTTGTGTTTTACCCTGAGGCAAGACTTAACAGTGATTATTGAAAGCAGTAATCATAAGGGCAAGCCTTACAAATAAGTCTCCTACTCTGAAACAGTGCATTTTGTCACACTGAATTACGCTTTTACATCACTTATTAGCTTACATGAAATTAGTACTTGAATCCATATCTGGGAACAAAGAAAAAATGAATAAGCAGTCAATTAAAGGAAATTTCTGAGAGCCTAGATTTGCCTATATTTACTGGGAAATAAATCTAAGTGAGAAATAACAGATAGGACTAAATCCCAAGGATCCAGTATGGACAAAAAAAAGAGAATAAAACACCAAAAAAGTGCTCATTGCCAGTAGGTTTACTGCAAGAAATTACACAAAATACTTTTTCCCTTTGAAAGAAATGCTCCCTGATGGTAATGGGTGTAGTTAGTTTCTCTGAGATTTGAGGATGTTTTCTCTTTGGTCTTCTGAGTGTGACTATAATATGCCCAAGTGATGCTTTAGTTTTACTTATCCTGCCTCTTATTTGCTGGACTGTCTGCATTCATGGAAACATAACCTTTGTCATGCTGGGAAATACTTCAAAGTAGTTCCCTCAAAATGTGCATCTGTGCCATTTTTTAATTTAAAAATTTTTTTAGCTTTATTGAGACATAGTTGACACAGGACTATATAAAATATAGAGCATGATAATTTGATTTACATACAAAGTAAATTTTTTATCACAAGTTTAGTGAGCATCCATCATCTCATATATATAAAAAATTAAAGAAACAGAAAAAAATTTTCCTTGTGATGGGAGCTGTTAGAATTTACTCTTCAAACAACTTTCATATATACTATACATCAGTGTTAACTATATTTATTGTATTGTACATCACCTCTTTAGTATATATTTATCTTATGACCAGAAGTTTGTGGCTTTTTTCTGCCTTCATCCAATTGTCCCAGTCCCCTCCCCCATAAGTGGTAGTCTATAACTTTATCTCTTATTCTATGAGTTTGGTTGGTTGGTTGTTATTGAAGTATAATTGACCTATGTACTCAGTTGTGTCTGGCCCTTTGCCACCCCATGGACCATAGCTGCCAGGCTCTGCCCATGAAATTTTCCAGGCAAGAATGCTGGAGTGAGTTGCTATTTCCTACTCTAGGGGATCCTCCCAACCCCGGGTTCAAACCCACATCTCTTACGTCTCCTGCATTGGCAGGCAGATTCCTTTCCACTACCAGATTCCCAAGGCAGTACCTGGGAAGCCCTAATTGACTTGTAACCCTGTGTTGGTTCATGCTGCAGAACGTAGTGATTTGCTATTTCTGTACATTTCAAAATGTTCACCAGGAGAAGTCTACTTGTAATTTATCACTATACAGAGTTGATACTTGTTGTTGATTATATTCTCCACACTGTACATTTCATGCCATGACTCATTTATTTTGCCTTAATTCCCTTCATCACCTATTACTTTCTCCTCCCTACTCTCTGGCACTCACCTGGTTGTTCTCTTTATCTATATCTCTGTTTCTGTTTTATAATATTTGTTCACTTGTTTTGGTTTTTAAGTCCCACATATAAATAAAAACATACAGT TCONS_00182788 . 3' 2690 TCONS_00182788 . 3' 6105 EMBV3_08146 CATTAATTTAGTCAAACATCTGTGTATTATTTTTTAAATTCTTTGTAAATATTTGTAGGC Gene GeneID:533920|LYPLAL1:NM_001099059:5_cdna Constitutive 2 NULL GeneID:533920 16 GENE LYPLAL1 MGC159517 lysophospholipase-like 1 EMBV3_35964 CACGTGTATGTGTATGGCTGAGTCGCTCCGCTGTTCGCCTGAAACTGTCACAACAATGTT Gene BVV0102_257217 + 1 EMBV3_05838 GK000019.2:56877031-56877688 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094737 TCONS_00094741 TCONS_00094744 TCONS_00094743 TCONS_00094740 TCONS_00094742 TCONS_00094739 1 XLOC_057532 Coding TCONS_00094741 XLOC_057532 Coding Coding GGA3 19:56863206-56877820 j TSS70792 4845 1 TCONS_00094741_1 647 0.0553147574819401 16 0.66954081981797 1.67927365076464e-16 8.40372805190599e-48 1.74337841361493e-28 7.60202527627711e-38 2.39177961911477e-16 2.55377577401003e-13 2.87375257297298e-44 8.25919985927943e-12 0.00010602582651384 1.62251480951122e-27 5.75257788499815e-54 1.38356480389717e-25 1.57673753259897e-08 1.71013628553188e-47 5.66154531785678e-41 0.000375503576880755 6.48952965091423e-23 9.82000947160742e-74 2.04589140577275e-43 0.000398073944976772 2.91995056852254e-158 1.96906323325254e-14 0.000121906120696697 4.46298553216386e-05 2.36114416413948e-43 3.69718605398844e-25 7.3576293067477e-49 0.000599668311160795 4.9535525925654e-93 1.72420144816515e-91 XM_005221179.1 GGA3 PREDICTED: Bos taurus golgi-associated, gamma adaptin ear containing, ARF binding protein 3 (GGA3), transcript variant X1, 0.0 3460 100.00 0.395665634674923 NM_138619.2 GGA3 Homo sapiens golgi-associated, gamma adaptin ear containing, ARF binding protein 3 (GGA3), transcript variant long, mRNA. 0.0 1433 78.96 0.319917440660475 TCONS_00094741_1 sp|Q8BMI3|GGA3_MOUSE GGA3_MOUSE ADP-ribosylation factor-binding protein GGA3; 0.0 827 75.16 0.945904173106646 2 coding 0 0 0 0 -1.7790864103536 0.0136095794968026 -0.0750717062107486 0.483372644076422 GCAATATGGCGGAGGCGGAAGGGGAGAGTCTGGAGTCCTGGCTGAATAAAGCCACCAATCCTTCTAACCGCCAGGAGGACTGGGAATACATAATTGGCTTTTGTGATCAGATCAACAAGGAGCTTGAAGGGCCACAGATTGCCGTCCGACTGCTGGCCCATAAGATCCAGTCTCCACAGGAATGGGAGGCAGTCCAGGCCCTGACGGGCCGCCTCTCCTGGTTAGGTGCTTCCTCGGGCGAGTGTTGCTGGCCAAGTGCCAGGTCCTGGCCTGAGCGCCTGGCCTCTGTGCTCCAGGTGCTGGAAGCCTGCATGAAGAACTGCGGGAGGAGGTTCCATAACGAAGTGGGGAAGTTCCGCTTTTTGAATGAGTTGATCAAGGTCGTCTCTCCGAAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTTTATAGCTGGACGTTGGCCTTGCCGGAAGAATCAAAGATCAAGGATGCCTACCACATGTTGAAGAGACAGGGCATCGTGCATTCCGACCCGCTGATCTCTGTGGACAGGACGCTGATCCCGTCTCCACCACCTCGTCCCAAAAACCCCGTTTTTGATGACGAGGAGAAATCCAAGCTTTTAGCCAGGCTGTTGAAAAGCAAAAACCCGGACGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGAGGATGAGGCGCGGGTCCAGAAGGTGACCGAGCGTCTGCACACCTTAGAGGAGGTCGATAACAGCGTGAAGCTGCTCGGTGAGATGCTGCGTCACTACAACAGGGAGGGCTCCGCAGAGGCAGACAAGGAGCTCATGAAGGAGCTGTTTGATCGGTGTGAGAACAAGAGGCGGACGTTATTCAAACTCGCCAGCGAGACCGAGGACAATGACAGTAGTTTAGGGGACATCTTACAGGCCAGTGACAACCTCTCCCGGGTCATCAACTCTTACAAGACAGTCGTTGAAGGGCAGGTCGTCAACGGTGAGGTGGTGACCTCAGCCATTCCCGACTCGGAAGGAAACCAAGGCACTCTCATCGACCTTGCCGAGGTGGAGGCGCCGAGCGGCCCGCCCCCAGCGCTGGCCCCTGCCCCCGCCGGCTCAGGCATCCCTGTCCTCCCCCCGCCTCCCCAGGCCTCGGGCCCTGGGCGCAGCCACTCGGCCGGCCAGCCCGAGGCCCCCCCAGGGCCCAGCAGCACGAGCAACGCCCTCAGCCTGCTGGACGAGGAGCTGCTCTGCTTGGGCCTCACCGACCCGGCGCCCAGTGCTCCTCCCGCCAAGGCGGCTGGGAACAGCCAGTGGCCCCTGCTCCAGAACGAGCGGTCAGACCTGGACTTCTTCAGCCCCAAACCTGGGCCGGGAGCCTGTAGCCCCACAGATGGGCCTCTCCTCCAGCCTTCAGTGGCCCCCATAGGCAGTTCCCAGGCCCCGGTGGCCCCAGCTGGCGTTCCTGTCCCCACAGCCAGCCCCTTCTTGTTCTCCACTGGCCTGGCCTCAGCTCTGGCCCCAAAGGCTGAGCCCATCGCCCCTGGGCACCGTGGTTCCACTTTGGGCGACAGCACCCCGCACCAGCTGGATGCCCTCGACCAGCTTCTGGAAGAGGCCAAAGCGACCTCGGGCCTGGTGAAACCTGCCACCTCCAGCTGCTTCCTGGGCGCTGCCGCCCCCCCTCTGCTCCCCAGTGGCGCCTCTGCTCGGCCTCTCCTCCCCCTCTCCGCGGGGCCCAGCAGCCCTCTCTTCCAGGCCCAGGGCAGCCCCATGAAGGGGCCCGAGCTCTCCCTGGCCAGTGTCCACGTGCCCCTGGAGTCTATCAAACCTAGTAGGTGTTGGAGGCTCGGGGTGAGGGGCGGGGGTCCCAGCCTGCAGAGGTGTGGGCTGCATGGCAAGGGATGGGTGGGTCCAGGCTTTCTCGCCAGGGTCCCTTAGAGCCGTACGCGGCCTTCCGTACCGTGTCGCAGACTGTGCTCGTCCCCGCTGTGCACTTGGGAGGTTCTTCCCAGGCTCCTTCAGGAGCTTCCTGGTCCCGGGGCCACCGTGACCTCTCGCTTGGCTGTGGTGCTTTGTCTCAGGCCCACCTCTCCCCCCACCCTCACCTGCCCCGTTCTTACATACAGGCAGCGCCCTTCCTGTGACAGCCTATGATAAAAACGGCTTCCGCATCCTCTTCCATTTTGCCAAGGAGTGTCCTCCAGGACGGCCTGACGTGCTGGTGGTGGTGGTGTCCATGCTGAACACGGCTCCCTTGCCCATCAAGAGCATCGTGCTGCAGGCCGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCCTCTGGGACAGAACTCTCTCCTTTCAGCCCCGTCCAGCCACCTGCAGCCATCACGCAGGTCATGCTGCTGGCCAACCCACTGAAGGAGAAGGCGAGGCTTCGGTACAGGCTGACCTTCGCCTTGGGGGAGCAGCTGAGCACCGAGGTGGGTGAGGTGGACCAGTTCCCCCCTGTGGAGCAGTGGGGGAACCTATGACCCCAGAGGACACGTGTCAGCTGCACTTTGGAGCCCAGGCAGGCTATCCCGAGAGGGGAGGCTCTCCAGGCCTGGTCTTCCTTCATGTCCTAACCGCTGTGCTTAAGAGCTTTGACGTGGAACAGGGGCCCGGGCCGCTGCTGTGATCTCTCTTCCTTCGGCCCCTAAAAGGACCTGTTTTTTTATTTACCTGTGTGACTTGAAGTGGCCACGTACATCAGGAGTGGGGAGTGGCCCCAGGTGCCGCCCCGGGACATGGCCCCAAGGCTGGAGTGGGTTTTCCCCTTGCGCTGGCATCCTCTGATGCAGAGACTCAGGGCCCTCCTTCAGGACCATGTCCTCACATCCCCAGTTCTCAGTCCCCCTGCTACCCAGGCTTCCCCTTGGCAGGCTCCTGGGAGGAGGACACAGCCCACGGCTCCCGGATGGCCCTGGGCCCAGGGCGCTGGTACTGCCAGATCGCCACCCCTGCCTTCTGTGGGCAGCACGACCCTGGAACGGGCACCAGAGGAGTTGTGCTGGGCCCTGGCAGCAGCAGGCTGTGTCCCATGGACATCACGGTAGGATGAGGAGCTCAAGCTGCTAGAAGTAGAACGTGGCCTTGTGGCAGCCTAAACTACACCCAGAAAAGGAAATGGGAGAGAGCAGTGTTGTGCCTTCTCCGGAAGCAGGTACCCAGCACTTTCTGGGAAAAGGGTGCCTCCTGCCGTGGGAATAGGCCATCTCACTCACTCACTACCTCTTGCTCATCGTGGAACAAACCGCTGTGCTGCCTCTGAAGGGGAGGACAGCACCCTGTGTCCCGCTTTGGCCCACCTCCTCCCACCAGATGGCCTGCGGGGTGGCTGGCTGTTGGGAACAGGAAGCCTCAGGATCAGGCGCGTTGCACTAAACTTATGTCCTTACCTGCTGCCCAGAAACCCCGAGTCCCCAGTTGCCAAGGGGCACTGTCGGCGATATGTTGGGTCTGGAGGTGGTGAGATTAGGGGCCTTGCTTGAATCGAGTCACCAGACCCTATTGCTTCAGCAGTGCTCCATCCACTGGCTACAGCTAGGCCGGGGAGTCCAGGCCTCACGGGGCGACAGGCAGGTGAGACCCAGCCGCTGGGGAATGAGCACATGGCTCATCTGCACTCAGCTGGATGAGCCAGAGCCAGCTCCAGGGAGAGGCAGCCCTGACCCCTCCCTGCTCTTGCCAGGCTTCCTTAATCAAGAGGCCATCGCCCCCACCCCTCCCCTCATCAGCGAGCAGGTTTCACTGCTTCATTAGGACAGACGAAAGAAAGTGAATCCATTTTACTTCTTAAGGAGTAAATCCAAGAGCTCCAGAGATGGGCTGCTGCAGCCCTGGGAAGCTCTGTGGGACTACTACACGGAATGTACCTTTACAATAAGCTTTAGACTTTAGAGTTACTTATGAGTGTTACTCGTTACTATTGAGGTCACTTCGTGACAAAAAACTGTACTGGATATATCAACTGCTGCCCTTGTTTTGCTGCATGTTAAATAAAACCATTTTTGCCCTATTTGGAATCTTTCTAATACAGATACCAGTCACCCCAGTGTGGGGAAAGGTGCCACTTGGGAATTCCAAACGCAGGCAGGCAGCTATGCTGGTGCCACCTGAGGTTTCTGTTAAAACATAAGTTCCTAGACTGTTTCCTTTTTTAAAGAAGATAACCAGCCAAGGGGAAAGATGAGGGGAAGGGCTAGTTAAGGAGTTCAGGATGGACATGTACACACTGCTATATCTGAGCGAGATAACCAACAAAGAACCTACTGTATAGATAGCACAGGGAACTCTACTCAATGTCACTGTTACAGGGCAGCCTGGACGGGAGGGGAGTTTGGGGGAGAATGGACACGTGTATGTGTATGGCTGAGTCGCTCCGCTGTTCACCTGAAACTGTCACAACAATGTTAACCGGCGGTACTCCAGCACAAGATAAAAAGCTGAATTAAAATAACCAGAAAGTTAACAGATGATTCTGAGGTGAAGCCAAGTTTCAGATGCACAAGCAAACCACTCAACACTCTTGTTCAGGTTTCGACCTGCAGGCAGGAGGGCTCTGTGTTCCCTGTAACTTCTTTCCAAGGTGGCTACCTCAGGTTTCTAGTGCTGGCAGCTTAAAACCTCCCCAAGTGTAAGAACTATAAGTTCTGTAAGAACTTGCCTGTATTTGCAAAAAGAAACATTTATTCTTTTAAAAGTGTATATACATTGCCTTTACAAAGATACCATGTTGGAGCCAACTTCAGGAACCTTCCAATGAGCCTTCTTTTATAATTGACCGAGCAAGATTCCGCGCAAGAGCA EMBV3_32793 CCTATCCCAAAAAGCCTCCTCTGGCACCTCCTGGTGTTTGGAACCATCCGTTGTAAGCTT Gene BVV0102_260678 + 0 NULL GK000007.2:39195034-39202865 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212851 TCONS_00212853 1 XLOC_130269 Coding TCONS_00212851 XLOC_130269 Coding Coding ARL10 7:39191654-39202669 j TSS159591 5791 2 TCONS_00212851_2 244 0.0319461232947677 4 0.474577810059924 0.000359842735664613 0.000177224651463975 0.000491848401348 0.000189274979413931 2.8696972147692e-07 2.06071574229598e-07 0.000204025443837325 3.40498482629261e-07 1.01960802856113e-06 0.000417971534770429 0.000337794851582169 9.34370216543634e-05 1.65582191852944e-07 2.71336005566795e-07 0.000215872542016652 0.00928807921734488 0.00465214953111771 0.0057927751169863 4.14161670915817e-07 0.000216654280822315 1.75835917471906e-07 0.00517311866417716 0.00521595951781655 0.00471880191086945 0.000449814354070477 4.13631906253133e-07 1.67090131923259e-07 0.0026267076244834 0.00119262405814201 0.00412856253144162 XM_005209154.1 ARL10 PREDICTED: Bos taurus ADP-ribosylation factor-like 10 (ARL10), 0.0 7438 100.00 0.711966845104473 NM_173664.4 ARL10 Homo sapiens ADP-ribosylation factor-like 10 (ARL10), mRNA. 0.0 1687 75.91 0.407874287687791 TCONS_00212851_2 sp|Q8N8L6|ARL10_HUMAN ARL10_HUMAN ADP-ribosylation factor-like protein 10; 1e-139 396 91.39 0.995901639344262 3 coding 0 0 0 0 -0.0813045513743782 0.506555450153415 -0.00994537183786985 0.880123561057721 TGGTTGGGTGGGTGGGCGCGGCCGAGGCAGTCGCAGCGGGGCCATCTTCTACAGGCCGGCTGGTTCGGCCTGTGCAACCGGCACTCGCGCTCCTCGCCCGCCCCGATGGCGCCGCGGCCGCTGAGCCCCTTGGTGCTGGCGCTGGGTGGCGCGGCGGCCGTGCTCGGTTCGGTGCTCTTCATCCTCTGGAAGACCTACTTCGGCAGCGGACGTGAGCGACGCTGGGACGGAGGCGAGGCCTGGTGGGGCGCTGAGCCTGCCGGCCTTCCACAGTGGGACGAGTGGGACCCCGAGGACGAGGAGGACGTGGAGCCGGCGCTGGAGGAGCTGGAGCAGCGCGAGGTGTTGGTGCTGGGGCTGGACGGCTCCGGGAAAAGCACATTCCTGCGCGTGCTGGCCGGAAAGCCGCCGCTGGAAGGCCACATCCCCACCTGGGGCTTCAACTCCGTGCGACTGCCCACCAGGAACTTCGAGGTGGACCTGCTGGAGATCGGCGGCAGCCAGAATCTGCGCTTCTACTGGAAGGAGTTTGTGAATGAAGTGGATGTGCTGGTGTTCATGGTGGACTCGGCTGACCGGCTGCGGCTGCCGTGGGCCCGACAGGAGCTGCACAAGCTGCTGGACAAGGACCCTGACCTGCCTGTTGTGGTGGTGGCCAACAAGCAGGACCTGAGCGAAGCCATGAGTATGGTGGAGCTGCAACAGGAGCTGGGCCTGCAGGCTGTCGATAGCCAGCGGGAACTTTTCCTCTTGGCAGCCAGCATCGCCCCTGCAGGAACCAGCTTTGAAAATCCTGGCACCGTGCACATCTGGAAACTGCTCCTGGAGCTTCTCTCCTAGGCTGGCGCCCACCCGCTCACTAGCCAGCCCTGGAGACTTCAGTTCTGCTCCTCCTGCTTCTTCATCTCCAGCCTGGGCCTGGGGCACGGTCTACATAACATCTCTTCCCTTCTTCCCTCCTCACCCTCAAGAGCAGGGCCTGGGTGAGGCCAAGAACCACACAGAGGCCTCCCAGTGAGCTAGCCATGAGGCTGAAGCAGGGAGGCAGTTGAGGCCAAGGGTGGGAGAGGACAGTGTCTTGCTAATTCTGAGCAGCAAGTGGATCCCACTTTCACCAAGGAAGGCAGCCTCATCCTCTGACCTGTACAGCGAGCTGCCCAGCAGGCTCAGTTCTCCCCGCCCTGCTGGTCCCAAGGGGTGAGGACTGGTGTAGGTGTCCGAAGTACGCCCTAACCCTAGACTGATCCCTTCTGGTGATTTTGCACCCTCTCGTGTGGGCAGGTTCTGGGCCATAAGCCACGAGCTCAGACTCCCTGTCCTGCCTTATGCTCCAACCCCAGCTGGCTCGTGGCCTTGTGCAATCCCTGCCTCTCTGGGCCATCCCTTTTAAAGAGAGGTGATTTAGGTGGTGGCTTTCTAACCAACCTATAAAGATAGGAAGCTTGAGGAGGAATCTAGAGATCCTGGCAAGAAGCTTCCTGAAACCTCCCTGCTTTCCCAAGGCTGAGGTCGAGCCCGCTAACCTCTTAAATAGATAGTAAGTGGTCTTCACCCCCTAATCAGAGAGACTGAAACCCACACCCACCCCAATCTGGAGTCAGAAGCTGCTACTCTTACACTTAACTGTGCCAATGCCCATGTTTACATAAGTCTGGGGAAGGAAGGAGCTTGCCTGTGTTCCTGGGAAGACTTGTCAGGGGAGCAGGATGTTGGCCTCCAGACTGCATTTAATTATTTATTTATTTATAAAAGGAACAGGCCCAAGTTTTAGGCTCTGTTTCTAGGTGCTGTTATCCAAACCCTAGATGACTGTCATGGAAAATTTGGATCTTTGAGGAAAATAGCTGGAATCATGAATGACAGTGTGGTAAGCTACACGTGTCAATGGAGACAGAGCTCTTCCTCCCCCAACCCTTTGTGGCTGTACTTGATGTCATAGAATTTCACCATGACCCATATGAACTTGAACTCCAATACTTGGCCTAATACATCAAAGGGACACAAACTCTGTAGAGGTAACAAATGACTCTGGGAGAGGCAATTTCATCATAGTTACTCTTACAAAGAAATTAGAATTAGCAGACCAACCAATGGGTAGCCTTGAGTATATCGCATAGCCTTCCTGGACCTGCTGATTGTGCAGCTAAGGCAAAGCTGGACAGAATAGCTGGTGTCCTCTCCAGAACACATTCCGTGATTCTCCTGTTTCCAGTGATCAGCCAGTTTAAAGACTGTCTCTGTACTGACTCTGTACTGACTCTTCAGTGCAGGCAGAAGGAACCTTTTGTCTGTCAAGAGGCCACTGAAGAGTTGACAGCCACAAATGGGCCTTTTTTTTGAGGAGGGAACCAACTCAGTTTGCTTTTTAATTGAGAATAGAGATTATGTGCCTTTGTTTCATTTGACATTTACTCAGCATGCCACAGTTTCATACTGTGGCGGGTGCACGAAGGGTGGGCCGGGAAGGTGTCTCAGAATAGAATCACTTTTCTTTGAAATTCCGATTAACTTTCTGTCTTAAGTGATTTGACTGATTTTATTTTAAATATTTTGGGAATGACTTGGGTTTTAGAGTAGCCTTTGAAACTCTGCTGACACTTCATTTTGCTGGCAGAAAGTAAGGAGACTTTACTTCTCTGTTCTGTGAACTTCACCTTGTCCTCTAGCGTTAATACTTGAAAGTTAGCCTTGGAGCCAACATTTTGGAGAGGGGCGCCCTTTTCTACTAATTAAGCTCTGCCTTTGGTCTAGTGCATATCACTATGTAGTACAGTTTTTAAAGTCCCCACTGTCAGGAGGTGAGAATAGAGTTACGTACTTGAGCAGCTTTCAAAGACCAGTCTCAGAGGCAACAGGTCCCGAGGCACACGAGGAGACACCACCGAGGAGCACTGAAGGTCCTGGGCGGTGGCCGTTGGTGCCTGTACAGGCCGTATGGACGTCCTGTCGGCCTGTGGGTGTGCGCGTGTCTGTGGCTGATGGCAGCACTCCTCTGCTGGCCTGTCCTCCAGGTGGGGAGCCAGACAGTGCTTGTGTCCTGGTTCCTACCAGGACCAGGCTGGGCAGAGTCGAGGAAGGGCCTTTTTTCAGAACCGCTGACTGCCTTGCGCTCTTATGTAGTTGTTCCTGAATGTGACTTTGGCTCAAGAGCCTAGGTGGCTGCTTTGGGGAAGCTGTTCATCTCAAGTGCAGCTCCTGACTAACCGGGATGACACCATGTTTCCCCCTCCGCCCCACCTGAGCTTGGCACTAGCGAATGGACAGCCGGGCAGCTCTCGCACTCTCATGAAGACCATACAGTGCCCACTTCATGCTTGGGAAGGCAGCTCATGCGTCTGTGTGCCGGTTGAACCTGTGAATCATGCACGCTGACACTGGGGGCTTCTGCTCTTGAGGTTATTTGAATGAAATCATGGCTTCTGACATGCTGCTGTCCTTCTGAAGAGAGGTCAGCCTGGCCCAGAGCTTGAACACGTGGATGGTCTAGGCAAGAGGGCTCTTGAGGCTACTGGGACCACCACCTTGGACCAGCTGCCTATCCCAAAAAGCCTCCTCTGGCACCTCCTGGTGTTTGGAACCATCCGTTGTAAGCTTGTGCCAACACAGTGGTATCCAGCTGTGAGGACTGGAGAGGAGGTGAAGTTGGTCCCTCCGGGCCTCCGGACCCTCCTCAGAAGTGCTGGTGAAAAATTTCACAGCTCCAGCATGTCTGAATGAGACCCCCGATTCTCCAGAAAAATGTTTCCACTTGCCTTTGGAAAATATTTTGTTCTTAGGCTAGGTTAGTAGCAACTGCCAGCATCTCAAACCAGCCGCTGAAACTCGTCTGTGGCGTCTATCCTCGTCCTCTCACAGTTGCCCCAGACCTCAGACCTGCACAGTCAGCAGTCTGCCTCACCCCTGCCGACTGCTGTCACCTTCTCCAAGTCTTCTCTAGTAACTCTAGAGGGAAACCTCCAGCTTTCCCTGCTGCCTCCTGGAGATGGGCCCATAAAGGGACAAGGGGAAGATTGCCATCAGATCTGAAGTAAAGGAGCCTTGCTGTCCCAGCCCATGCCCTGTGAACCCAGGCCCACAAACTGCATAAAATGGAGTGTTGGTGGCTGTGTACAATAAATGCCAAAAATTTGGTGGTGGTTTCATATAAATTCTGATTTTGAGGAACAAACGTGCTTGGTGCTTAGCAGTCCCAGGGAGGGACAGCTATGGAGGGTGGTCCCAGAACACGTCCCACAGCAAATCCCAATCCCTTCAGTCCACACTGGGGTGGGTGGGTACATCAGCTTTGGCCTAACAGTACTTTTGGGGAGATACCCAAACCCTTCCTTGTAGGAGTTCTAGCTGACAGGGCCAGAGCTAGGCATGAAAATGGAAGTGAGAACTTTTTTTTAATTTTAGCAATGCTGTTTTGTTTTTTAAGTGAAGAATAATTGCTTTACAGAATTGGAGAACAGCTTTGACTGCCTCCATACCAGAGGTCAGAATGGAGGTGGCACCATTCCACAAGTGTCCCCCCAACACCTGCCCTTGGGCTGGGCTCTGTGGTTCCCTCACAAGGTCGCTGGATTCAAGCCCAGTCTGGTAGGGGATGTCCAACCAGACTAAAAGACAGTTACTGGCATTGGCTACAGAAGTCGGGGCTGGGGGGACTCCAGGACACTGACACAGCCTGGGAGCAGAGGAAGGTGGTATGGAAGGCTTCCGCAAAGCCCTGTGGTATGGCAGCTGAACTGGGTGAAGAAACAAGGTTAAGGGCCTGGCCCGGTCACAGGCCTGATTTCAGAATGCTCTGAAGGACTTCTGCATTCCTAAAGCTTTCATTCCTAAAGCCTTCGCTCACGGTGACGGTCACTGCTGGAGTCTAGCAAGTCGAGTCCAAAAGGCAGGTTTCTGTCCAGTTTCCAGCCCGCCTTAACGGTGTGAGACAGTGGGCTGCTTTCAGTGGCCGAAGAGAAGACCAGCAAGCGAAAGTCTAGGCGTAGTCATTGGACAGAGTAACTTCAAACCCCATGTTAATGCCTCTCAAGCCTGTTTCCTTACCAGTGAGAAGATAAAACCACACAACTGTGTGGGTTTTTTGTGAAATGTTTTATGTAAAAATACTTAACTCCTTTCCTAGAGCAGTGAGGGGAGACAAGTTTTATGTGACTTAAGGAGAAACCTCAGGAACAGAAGGTTTTTGTATTATTGATACCTGACAATAATGAATCAAAATGCCCAGCACCCACCTCACTGTGACTATAATCCTGCTACATACCAATCATGCCACCAAATTACACAGGCCAGGCCCGAAGGAATGCCATGCAGTGTGCAGCCCAGGACGTGGTACACAGCAGAGTTGCATTCAGCAGTCCAACAGACATCTCAGAAAGCAGGTTTGGGGACTTCAGACTCAAAAGACAAGCAGCAAAGGCAGGTCACTTGAAGGCAGATCAGGAGGCAGCTATATAGCATCTTATCCGCTGGCACTCGAGCCACAACTGGCTTCAGACCAGGGCCACAGAAAACCAGTTCACCAGCCCCCAGCCTGGGGTGGGGCCACCACTGGAGGCCTCTCCCAAGCAGCCCAGGCTTCTGTAAAAGTATTAGTCAGCTCAGATGGTAAAAAATCTGCCTGCAGTGCAGGAGACCCAGGGTCTATCCCTGGGTCAGGAAGATACCTGGAGAAGGGAATGACTGCCCACTCCAGTATTTTGTCTGGAGAATCCCATAGACAGAGGAGCCTAGCAGACTACAGTCCATGGGTCACAGTCAGACGTGACTAAGTGACTGACTCACTTTTCTGTAGAAG EMBV3_11434 TGTCTTGTGGCTGTTGCTCTTGCCAGGCCTCCTTTTCCAGAAGTGTTTGGAAAGGAGAAG Variant GeneID:282208|CSN1S1:NM_181029:14_cdna 152^223 5 EMBV3_09338 GeneID:282208 6 GENE CSN1S1 CSN1 MGC133694 casein alpha s1 EMBV3_35916 AGCAGCCAGTGGGCAGGAGAACGGCAGAGCGGGATCCCAACAAGCCCTCAGGATTCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21623 ACATGAAACTCTGGATAAGTAGATAACCAAAGACTGCAGTTCTTAAAGCCTGGTGACTTC Gene GeneID:444860|ST3GAL6:NM_001002883:69_cdna Constitutive 2 NULL GeneID:444860 1 GENE ST3GAL6 SIAT10 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 EMBV3_32177 GATGAAGTTGTACCAACACCAGCAACGTTAGAATGGCCCTGTAGCCCTGAACTCTCTATT Gene GeneID:281450|RELN:XM_002686760:52_cdna UTR3_Alt 2 NULL GeneID:281450 4 GENE RELN MGC152334 reelin EMBV3_22888 CCCCTGAAAACCACGCATGCTGCTCATGTTAGGTGGCATGTGCTATACATATCAGTCAGG Gene GeneID:533920|LYPLAL1:NM_001099059:5_cdna UTR3_Alt 2 NULL GeneID:533920 16 GENE LYPLAL1 MGC159517 lysophospholipase-like 1 EMBV3_05812 GCTTTAAAACTAATTCACAGCCCCGTCTTGATTCCCTTATCTCAGGGTTGCCAGCTCCGG Gene BVV0102_030770 + 0 NULL GK000023.2:14351088-14959071 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00131 GCTTTGGAGACATCAACCCTCACAAGCGCTATCAGTTTGGACAGGTTTTCTGCCCTTTCC Gene GeneID:767963|MGC134105:NM_001077031:31_cdna Constitutive 0 NULL GeneID:767963 19 GENE MGC134105 NULL hypothetical protein MGC134105 EMBV3_11086 AAAGTTGATAGAAACTGGAGAAAGAGAACGCCCTGGTACCTGACAGTGTAAAGAAGGAAC Variant GeneID:614069|ENY2:NM_001034747:50_cdna 229^374 2 EMBV3_10146 GeneID:614069 14 GENE ENY2 MGC128580 enhancer of yellow 2 homolog (Drosophila) EMBV3_00610 GTGGTGACCCCAGAACAGATTGAAGAGGCCGAGAGGCTCGGGCTGCACTCAAGTGGGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39421 CCTCAAGTTCATCAAGAAAAGGGTGGGGACACATATCCGCGCGAAGAGGAAGAGAGAGGA Gene GeneID:768327|RPL36:NM_001078139:96_cdna Constitutive 0 NULL GeneID:768327 7 GENE RPL36 MGC127188 RPL35 ribosomal protein L36 EMBV3_32590 ATGAGCCTTGGCTGAGGACAGAGGAACCTCAAGAATCTCACCTGGCTCTTTGCCTTCTCC Gene BVV0102_138523 + 0 NULL GK000017.2:57343549-57352624 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077528 1 XLOC_047089 Coding TCONS_00077528 XLOC_047089 Coding Coding FAM109A 17:57350722-57353338 = TSS57918 2616 1 TCONS_00077528_2 200 1 0 0.000754138151116427 0.000295769138382899 0.000705723440328432 0.000126974743225062 9.43650600837164e-05 0.000103920687272478 0.000423556486076621 0.000158268410643028 0.00019755449643288 0.00165617851712574 0.000206516645227142 0.000215962663674242 0.000196330727490342 0.000749834051400513 0.000242323200998536 0.00212019478833697 0.000679068496012474 0.00174562308866523 8.49767077883134e-05 0.000643269330141424 0.00235454239174899 0.000845320480986333 0.000227949086146693 0.00079465443224429 0.000315172031800772 0.000490166798324196 0.00101236017886201 0.000260690544718803 0.000287639178405053 0.00068947758156594 XM_003587164.1 FAM109A PREDICTED: Bos taurus family with sequence similarity 109, member A (FAM109A), partial mRNA. 0.0 4718 100.00 0.999617737003058 NM_001177996.1 FAM109A Homo sapiens family with sequence similarity 109, member A (FAM109A), transcript variant 1, mRNA. 3e-146 524 87.10 0.163608562691131 TCONS_00077528_2 sp|Q8N4B1|SESQ1_HUMAN SESQ1_HUMAN Sesquipedalian-1; 1e-70 219 60.27 0.91 1 coding 0 0 0 0 -0.100314529716902 0.415267140627805 0.0123887795274313 0.815139888957179 CTGGCCTTCTACGCCACCTGCAACACCCCAGCCGACAACGCGGGCTTCCTGTACAAGAAGGGCGGCCGGCACGCGGCCTACCACCGCCGCTGGTTCGTGCTGCGCGGCAACATGCTCTTCTACTTCGAGGACGCGGCCAGCCGCGAGCCCGTGGGCGTCATCATCCTGGAGGGCTGCGCGGTGGAGCTGGTGGAGGCCGCCGAGGAGTTCGCCTTCGCCGTGCGCTTCGCCGGGTCGCGGGCCCGCACCTACGTGCTGGTGGCCGAGAGCCAGGCCGCCATGGAGGGCTGGGTGAAGGCACTGTCGCGGGCCAGCTTCGACTACCTGCGGGTGGTGGTGCGTGAGCTGGAGCAGCAGCTGGCGGCCGTGCGCGCGGGCGGCGGCCCACCCCCGGCCCACCGGCCCCGCGCGCTCCCATCGCTCCCGTCCAAGGAGAATGGCTGTGCCGTCTGGAACGCCGAGACCCCCGCCGCCTCCGCCTCTGTCAGGGCCAACCCCAGCTCCCGGCCCGGCCCCGAGCCCCCGCCGCTGCCGCCTCGCCGGCGGGCCTCAGCGCCCAACGGGCCTCTCGATTCCGCCTCCTTCGCCCAGCTGCACGAGTGGTACGGCCAGGAGGTCAGGGCGCTGAGGAGCCAGTGGCTCAGCAGCCAGGCCCAGCCCTCAGAAGCTGGGGGACCCGGTCGTGAGGGAAATCGCCATCAGGGTCAGCCCTGAGGTCCCTGCCGGGTCTGCGTTCGGGAACTCAAGGCGCTAAGAAGATGCTGGGTTCTGAGGGATGTTTTGGGACCTCTGTAATTCAGAGAGAGCCTGGCCTTGAGGAGGCCACCGTGCCCGATTCTCAGGAGGATCCAGGCCCTAGATGATCCTCAAGCAGCCAGAGAGCTGGTTTTGTGGGAGCTGTAGCCCCAAACCGAGCCCAGCAGGTGCCTTGGTGGCCTGTCCTGAATCACCGAGCAGAGGTTTGTTGCTGGCAACAGGCCTTGGCAGGGGCGACTGGGACCTGCGAGGCTCTATGAGCTGGAAGGCACATGAGCAGTCAGCACTGGTCCAGACTGGGCCCCACGTGGTCAGGAGGCCAGGCTGTGCTACACCACACCTGGGCCTGACCTCCTTTTCCTCCAAGGCCCGCTGGAGGAGCTGCCTGACTGCCAGCCACCTTCCTGCCTCCATAAGCAGCAGGTGCAGAAAGGCAGCACCAGTGTGGGTTTTCATGTATGACCCGCACCAGGCTTCTGGCCTGGAGTGAGGCCCAGGCAGGACTATTCCTGGGGCCTCAGCCAGGCCTTGGGGTGATGCCCTGGGGCAGTAGACCCTCTGGCCTTGGGCCATGTCTGTGTGCCTGTGGCAGCTCTCACCCTTTCCCAACACTCCTTAACCACATCCTCTGTCTTCTCCCGGAGCCAGCTCTCCCACCCCTGGCCTGGGGCGGCGCCTCGCAGGAGCCCGCCTGACCTTGTCCAGTCCTGGACCAGGCAGCCATGGCCTGAGCTGACTTCCCAGCAGGTGCCTCTGGCGAGGAGGGGCCATGAGCTGACTCACAGCCCAGAAAGGGTGCAGATGCCAGTCTGATAGGGGCAAAGCCGCAGCTGCCAAACCATGTCTGGCTTCCAGAACCCTCTCCCACCATCACAGCCTATCTCCGTGCTCACCAACTCAGCCCCACTCTCGCCCAGCAGCATTCTGAGGAAGACCAGGTCTTGCTTTGCCCCGCGCCCAACTTCTGGTTTTACTGTTACTCACTCACCACAGTGGCCATTCTTCATCCAGGGAGTCTCTGGGGGCTGGGACACCCCTGGCCCTCAAGCTGGGTCATATTTACAGTCCTCAGTGCCTCAAAATCGGGACCCCCCTGAGGACACCTCTGCCCTAATCTTTATTTCCCCAGAGGCTCCCTCTTGGTGACACTGACTGGGCCCTTTGCCCCTTTCTGCTGCCTTTGGAGACCTTGGGGCTTGGGAAAGAATGGGTGCTGTCTGTCTGCAATCACCAGCTCACTGCTGGCTCAGCTGACTGGAGTGTCAGTTTTAATTTACTTTTTAATACTTCAGGGTGTCTTTTTCTCTCCTAGCAACAGAGTTTGGTATTTTCACTGTTTTTGTTTCTTGTTGGCTGGTGAAGGGATAGGGTGCCCTGGTTCTGGGCTTGGCCAGTGGCGGTGGGGAGTAGGTGGCACTGCCCTGGGGCGGGGGGTGGGCAAGGAGCCTTGGCTGAGGACAGAGGAACCTCAAGAATCTCACCTGGCTCTTTGCCTTCTCCCTGGTGAGCCCTGCTCACCTGTAGGTGCCTCTGGGGGTCTTGGTACGCTTTCCATCCCCCCTTCCCCAAGTCCTGAGTGGTGGGCAGGGTTGGCAGCTCTAGTCTATAGGCTCTGGGATCTCAGGGGGTGTTAGGAACTGTTAGGTGCCCATGTCCTGGCCAGACCCAGCTGGTGTGGTGAGGCGTTGGCCCCAGTCCTGGTGTAGGTTTACAAGCTCTAAAGGTACAGTCTCCCCCCTCCCCGCCAAAGCCCAACACAGGGTCAGGCTGTCTCCAGAGTTGGGCAGGGGAGAGAGATCAAGCATCCTGGGAGAGGGAAATAGAGGCTAAAATGAAATAAATAAAAAACTTATCAAGTAA EMBV3_22596 GGTGCAAATTATGGCATCAGTCAGTAGTTACCAAAATAAATCCAATCACTTTCACACTGC Gene BVT0102_056161 - 0 NULL GK000008.2:40069801-40077063 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225049 TCONS_00225050 TCONS_00225047 TCONS_00227408 TCONS_00225048 2 XLOC_137679 XLOC_138238 Coding TCONS_00227408 XLOC_138238 Coding Coding CDC37L1 8:40070023-40092097 j TSS169775 4412 1 TCONS_00227408_3 337 7 0.800434920491098 0.00182945793609067 0.00238562413153304 0.00129188666060882 0.000853435670538207 0.00143097049114185 0.00057245912039413 0.00256237178998431 0.00186327843570153 0.00300190230907775 0.000377363995686237 0.000376503672725728 0.00020442808023249 0.000358483748756139 0.00113871447338762 0.00068704468528898 0.00229677834447472 0.000669579310065597 0.00220110569860583 0.00160183133988909 0.00157291164023908 0.00102241122927752 0.000799757435408474 0.000690108630729218 0.000870289846047055 0.00202154595125528 0.00140804658067152 0.001338676676125 0.000292659406304016 0.000152630255869145 0.00018871980407871 XM_005209963.1 CDC37L1 PREDICTED: Bos taurus cell division cycle 37 homolog (S. cerevisiae)-like 1 (CDC37L1), transcript variant X1, mRNA. 0.0 2933 100.00 0.368313689936537 NM_017913.2 CDC37L1 Homo sapiens cell division cycle 37-like 1 (CDC37L1), mRNA. 0.0 2340 90.45 0.379873073436083 TCONS_00227408_3 sp|A6H754|CD37L_BOVIN CD37L_BOVIN Hsp90 co-chaperone Cdc37-like 1; 0.0 705 100.00 0.997032640949555 1 noncoding 0 0 0 0 -0.0110698690100381 0.935721066134868 -0.0395906156982495 0.533621978539248 GTCCGCCAGCTGCGCGGCCGGGACTAACGCGGCACGTACGTCGGCGTCGGGGCTAGCAGAGGGATTCTGGGTAACGGCCCCAGCCGGCTGGGGCTGCTGGCTCGGCGCAGCGGGTTCTACTCGCGCCAGGTCCGTTGGCTGTGGGGGTTATAAAGCCGCGGGCAGCCGGACATGGAGCAGCCGTGGCCGCCGCCAGGACCTTGGAGCCTCCCTCGGGCAGAGGGCGAGGCTGAGGAAGAGAGTGACTTGGACTTGTCCCCTGGTTCTCCCCGCTGCCCGCAGCTGCCGGGAGGCGGCACCCAGATGTATAGCCATGGAATCGAAATGGCTTGCCAGAAGCAGAAAGAGTTTGTGAAGAGCTCTGTGGCGTGTAAATGGAATCTTGCTGAAGCTCAGCAGAAACTTGGTAGCTTAGCACTGCATAACTCTGAGTCCTTGGATCAGGAACATGCCAAAGCACAAACAGCAATATCAGAACTGAGGCAACGGGAAGAAGAATGGCGGCAGAAAGAAGAGGCTCTAGTACAAAGAGAGAGAATGTGTCTGTGGAACATGGATGCCATTAGCAAGGATGTTTTTAATAAGAGTTTTATTAATCAAGATAAAAGAAAAGAAACAGAAGATGAAGATAAATCAAAATCATTTATGCAGAAACATGAACAGAAAATTAGACATTTTGGTATGTTAAGTCGATGGGATGATAGTCAGAGATTTTTGTCTGACCATCCATACCTTGTATGTGAAGAAACTGCTAAATATCTTATTTTATGGTGTTTTCATCTAGAAGCTGAACAGAAAGGGGCTCTAATGGAACAAATAGCACATCAAGCAGTTGTAATGCAGTTTATTATGGAAATGGCCAAAAACTGTAATGTGGATCCAAGAGGATGTTTTCGCTTATTTTTCCAGAAAGCCAAAGCAGAGGAGGAAGGTTATTTTGAAGCATTCAAAAATGAACTTGAAGCTTTCAAGTCAAGAGTCAGACTTTATTCTCAATCACCAAATTTTCAGCCTGTGACAGTTCAGAATCATGTTCCCCATTCTGGTGTTGGATCTATAGGTTTATTAGAGTCCTTACCACAGAATCCAGATTATCTTCAATATTCTATCAACACAGCTCTCTGCAGTTTAAACTCAGTGGTACATAAAGAAGATGATGAACCGAAAATGATGGACACTGTATAATTTGGTTAAGACTGCTGAAGCCAAGTACTATTTTGTTACAAGAAAGGAAGAACTTGGCTATTTTCTTGACACTTTTATGGGTGCTGCACTTTATTTTTGTTTGGTTTTTGATGGGAGGGAAAACAGAGTACTGAAACGTTTTGTAAAATTTTTTTTATGTGCTGCTAGGTTTTTTTTTTTGTTTTATTTTTTTCTGAAGAGAGGAGTGGTACCATATGTTGCAAGAAGTCAAACTGGACTTTTTTTGGGTTTTTTGGCTACTAAATTTGCCTTTAATCTTACTGTTCTCAATTTTGGAATCAAAGTATGAAAATCTGCACAAATGCAATGTTTACAAGAACTGGTTGATTCTAGGAGGCATCTGCTACAGTCTTTTTATATGGATATGTACATGTCCTACTCTACAAAAATGATTAAAGATTAAAATGTATCCTATTGCTAATTTAGCTGTCAAATCTGGTGTTTCATCATATTAAAAGCAATAAATCAGTAGTTGGTAATCTGCTTTACTAAATAAGCTGGGTAGTACAAATTAAAACAGTCTTTCCCCTTAAAATAATATTACATTTGTTTCTTCAGCACCATCGGTTAAATCCTTAACTACAGTATCAATGTTATATGGATACTAAATTAACCCCCAAGTATTCTCAGACGTATTTCCCTTAGAAGTTGATTTTACCCTATTGACATTTTAGTATTAGGGTTATATAGTGATATAAAAGGTGATAAAGCTCATAACATTTTTTTTTTCTTAGTAAGATCCAACTTAAAGTTCACTCTTAATTTCTTGACATAGTCTGGGATCTCTCAGGGAGCAAGTTTTAAAAGAACTAAAGGCCTATAAGAACAAATAGGAAAAATAATCTGATTTTTTAAGTTACAGTTATTGTTTTACTCTAATGTGGCCCAAAGACTTTTTTAAAAGGCAAGAGAAATCTTTTGACACGAACTACTTATTTCTAAGAATTTGGTGATCCTTACTGGTAATGATGGCTTTTACTACATTTGTCATTCCTCTCTTTAGCTCAGTTACCATAGAATGCTTCTGAGCTTTAATACTTACATATATAATTCACTTTAAATATGCCAGGATATTTGATGGTTCATTTTACTAGGAATGAGATGACAATGTTAATTATGCTGTCCTTATTATTTGAGGATTAACCTTCTGACTTATAGGAACATGAGCTTTGATTTGTATCAGATGTAGTCTTTGGTGGCTCAGTCCCATTGGGACTAGCAGTAAACATGTAGAAGATGATTAAATGGGATTTGGACTACATGTCTCAATTTGAGAAGCCACCCCCATGGTGATCAGATCTGTGATGGTGGCTTCATTTGCACCTTGTTTTAAACTAACCTGAGGTGATAAGGCAGTTAGTACTCATAGAAACAGATTGGAGTTATTGAATCATACATATGTAACATCACAATCTTCTTGGTTTTCAGAATAAAACTTGTTTTTGTGCTTTTAATATATACTCTATAATAAAATGTTCGACTAATTTATGTGCTAGCATTCATCAGCCTGTAGTTTTTTTTTTTTTTTTTAACCAGTGACCTAGTTATAGAAGTTTTCTGCTTCTGCTTTTTTTTTTTTTTTTTCCTATTTTGGAGCAAGCTCTTGTTTTTTCTGTCCTATCAAATGGAGAATGAGTATAGGAATAAAATTCCCAGCTTCATAGAAAAGTAACTTGAACCATTACTTTCTATTTCTCAACCTCACTTTTCCCCAGGATTTGCCTGTAAGCTCTAAATTGTTTTTAATTTCATTTTGCCTTAGAGATAACTAAAAACTGAAGATTGGAAGGAGAGAAATTATCAACAAACTGAGTATACTGTTCCTGGAGGATATTTTTGGTTTCTATTTTATAAAATATGAATTATTTAAGAACTATTTAAAATTTGGTTATGCATGTGCTTTTACTTAGGAAAGTGTTGTATATTTGCAGTGTGAAAGTGATTGGATTTATTTTGGTAACTACTGACTGATGCCATAATTTGCACCTAAAGACTATAACTTACAGTTTAGCAGTACTCAATACTCAGAACAATAAATTGACATCCTTTTTATTTTTCTTTATTTTGCTAAGAATGAATTCCTATTAGGAGAAATGTCTTCTGTTTCTTAAGTAATAAGGGTATACTCAGCAAAGGAATAATTTATTTTTCAGGTTGCACAATTTTCTCCAAACAAATTACACAAACCATGGAAAATCTAAACAAATGAAGCATCTTTGATATCAGAGTGTCTATCAGAGATTCTTACTTCATTTGATAAATTAGTCTTCTAATGAAAGATGTTTTTAAAATAGCTATCATTACATTCCTTGTTAGTTCAGTTTTATCAATGGTGGTAGATACAACACTGGTTTAAATCAAAGATTCTTCTCTAGGAGAGATGAGTAATATTCTCATCCAGTTATACCGTGGGTTCTTTCAAATTTTGCCTAGTGAGCTCACATTCTCCTGTAATTTCTCTCTCGGAAAATTGGGACTTCTGTCAGACTGGCATTCCTATTACCCTTTTAAAAGTAAACTAAAATGGTGCCCAAGAACATAAATATAGTTTAGTAGTGGCTTTACAAGATTAAAATATTGATTGTGAGTTTAGGCAAAGTGATTTTGAAGTTAATCTTGGGATATTTTCAGAGACAAATAAAAAGATGTCAGTTTACTGTTCTCAAAGTTGGTCATGTATTTCAGTTCTTAAACTGATACAGGACAGAAATGTACTTATCTCAGTTGAGGGTCAGGCTTTTCATTTCAGTTTTGCTTCTATATCCTATGCATTTTAAAAGTCTGCACATTCATTTCCCATCTGTAATGGACATGTATGTGCTATTTCACAGGTCTTCTGAGAAGCTGACTCATCTAATAAGTATGTGCTTGCTTACTATGTAAGCCGATGGCGGGAAGAGGTACAATGATGAATAAAAGTTGATTATGAATTGCTTAAAATCTAATAATGAAGTTGAAACCATTGTCATAAACCTCAGAGAATAAGACTTAAAGTTTTTGTCTTTTCTAAGTATGAAATTGATTTTTTAAAAATTCCCACATATTTCACTTTGTTGAATGACATTTGTCATGCTACTTACTCTTCAAACACTTTTATAGAGTCCTTTGGTAAAATATGACACATCACCAAACTGATTCACACTTTGGTGACATTCTTCCACCATGCAATTTTACATGCATAGCAATTTTAACTTTTTACTCAGTGC EMBV3_39482 GGTGAAGTTGAACAAATCGCTATGATGAAACCAAAAGGCCAGACTGAACACGATGAGGGT Gene GeneID:353350|SMC4:NM_001105326:106_cdna Constitutive 1 NULL GeneID:353350 1 GENE SMC4 MGC140334 SMC4L1 structural maintenance of chromosomes 4 EMBV3_35126 GACATGGATGCAGAGAAAACTGGAGTCCTTGTGTGTGACTGGTGGGAATGTGAAATGGTG Gene BVT0102_066795 + 0 NULL GK000017.2:54851001-54885467 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29310 TGCAGCACTGGGTCCTATCCGAGAACTGAAACCAGAACAAGTGAAGAATATGTCTGCCAG Gene GeneID:521442|SPAST:NM_001081591:26_cdna UTR3_Alt 2 NULL GeneID:521442 11 GENE SPAST MGC143109 SPG4 spastin EMBV3_01133 CACCTTTGATTTTTGGCACTTTCACCCCTGGGTTCCATCTTTCCTCTGTTCACAAACTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03268 TTAGCTGTCACCAGCACTTTTGACCAAATCCTACTACTGTGTCCCCTGCCCCTGGGCTTA Gene GeneID:514210|MAP3K11:NM_001101991:619_cdna Constitutive 0 NULL GeneID:514210 29 GENE MAP3K11 MGC165851 mitogen-activated protein kinase kinase kinase 11 EMBV3_31395 TGGTTAAGACTGAACTGCCAATGCAGGGGAGCACGGGTTTGATCCCTGGTCGGGGAACTA Gene BVV0102_452122 - 1 EMBV3_33915 GK000003.2:33503781-33513766 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176819 1 XLOC_106593 NonCoding TCONS_00176819 XLOC_106593 NonCoding NonCoding - 3:33510580-33511208 - TSS131578 628 2 TCONS_00176819_2 49 0.872611464968153 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00100935722864525 0 7.99073215340244e-05 0 0 0 0 0 0 0 0 0 0 0 0 XM_005225449.1 PAOX PREDICTED: Bos taurus polyamine oxidase (exo-N4-amino) (PAOX), 1e-47 194 84.32 0.288216560509554 0 noncoding 0 0 0 0 0.0357666958412259 0.79654880341634 0.083097748698563 0.213315323792427 ACAAAATTTTTAATAATTTTAAAATTATTTATCTTTCGGCCATGTGGTTATGTGGGATCTTAGTTCCCCGACCAGGGATCAAACCCGTGCTCCCCTGCATTGGCAGTTCAGTCTTAACCATTGGACAGCCAGTGAAATCCCTTAAAATATTTTAAAATTGCTTTATTGGTTTGCTGAGACTTCCTGATCCCAGATTCTTTACCGTCTGAACTACCAGGGAAGAAAAAAGTAGTTAATCTATGGTCCCTCAGTGGTGAAGAATCAGCCTGCCAATGCAGGAGACAGGGGTTCAATCCCTGGGTCAGAGATTCCCGGGAGAAGGAAATAGCAACCTACTCCAGTATTCTTGCCTGGAGAATCCTATCGACAGAGAAGCGTGGTGGGCTACACCCATAGGGTCACAAAGAATCAGACAAGACTGAAGCAACTTACCATGCATGCACTTAGACTACAATACTCTTTGATATTTTCTTATTTTTAGAATGTCATGTGTATTTAAAGGTGTGTATTCTTTTTTAATTGGAGAATTGCTTTACAGTATGGTGTTGATTTCTGCCATACATCTATTTACATAAATCGTCTATAGATATATGTATATCCCCTCCTTCTTGAACCTCCTTCCCACCTC TCONS_00172938 TCONS_00172939 . 3' 2552 TCONS_00172938 TCONS_00172939 . 3' 3179 EMBV3_28255 TGTCAGAGAAGATTTCCATCATTGTTTAGGGACTAACAGAGCATAGAGGCTACCTGGTCC Gene GeneID:506687|SLC37A2:NM_001024486:5_cdna Constitutive 2 NULL GeneID:506687 29 GENE SLC37A2 NULL solute carrier family 37 (glycerol-3-phosphate transporter), member 2 EMBV3_32126 TGAGACTAGGAGCGAGGTAGTTTCGAGACATGGGCGTTTGTCATGCCTTGGACAGTGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01412 CCCGAGAGGAAGCCAGAGGCCCTGTCCAAAGTCAGCATCATCCAGAGACTGGGCAAGCCT Gene GeneID:531855|MGC155219:NM_001080291:664_cdna Constitutive 0 NULL GeneID:531855 18 GENE MGC155219 NULL hypothetical LOC531855 EMBV3_33532 GTTCTTGTCAGAGTCAGGAACATCCCTGTTTCCAGCTGCTATAGCTAGTCCCTTTCAGTG Gene BVV0102_354014 + 0 NULL GK000004.2:86237575-86250023 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07561 GGGGGACCGCAAGGTCGGAGAACTGCAGGAACTGTCGCCCAACGACCCGCAGGTGCAGAA Gene GeneID:503685|CST6:NM_001012764:500_cdna Constitutive 0 NULL GeneID:503685 29 GENE CST6 NULL cystatin E/M EMBV3_20112 CCCTGTACAAGGATGACTAAGTGTACGTCTTTCCGTGTGTGTATGCTGGTGAAGTCAGAT Gene GeneID:509991|HOXA3:NM_001076825:130_cdna Constitutive 0 NULL GeneID:509991 4 GENE HOXA3 MGC142722 homeobox A3 EMBV3_08696 CTCCTAATCCCCCCAGCACTCATCCTTATCTCCTATGGCTTCATAACTCAAGCAGTGCTG Gene GeneID:614762|LOC614762:XM_002689072:81_cdna Constitutive 0 NULL GeneID:614762 7 GENE LOC614762 NULL similar to Olfactory receptor 2G3 (Olfactory receptor OR1-33) EMBV3_42249 GCTTTCTGGTAGATGCTTAGCGACTTCTTTGGCTACCTCGTGACTTGCATAAGAATGGGC Gene BVV0102_422135 + 0 NULL GK000012.2:23308337-23321307 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19613 AAGGTGGCTTTGGAGCGGCTCCTGCCGCAGTCCAGAGCACAAGAAAGCAACCAACAAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32361 AACTGCGCCTGTGCAACAACGGCCACACCGATTCACGTGGTTCACCTCAGCACTGCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09394 CTGTGTCCCAGTTGGCAGAGGCACAATGAGGGGAGAAGATACCTGGTTTGGAGCTAAACA Gene GeneID:531467|LOC531467:XM_002686532:740_cdna Constitutive 0 NULL GeneID:531467 3 GENE LOC531467 NULL hypothetical LOC531467 EMBV3_14019 TGATGAGAATTCAGATAAGCTTGCTAATAACACGCAGAAGCATGTGGGATCCATGCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10833 TACCAGAACTTCATCCAGACCGATGCGTCGATCAACCCGGGCAACTCCGGTGGCGCACTG Gene GeneID:100298828|LOC100298828:XM_002683928:2_cdna Constitutive 0 NULL GeneID:100298828 Un GENE LOC100298828 NULL similar to HtrA serine peptidase 1 EMBV3_12154 AAAGAATGCACGATTCTGGCACTGTGACTGGTTGTGGGGGGTCTTTGGACCTCATCTCCT Gene BVT0102_139513 - 1 EMBV3_20541 GK000029.2:43154676-43159738 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163806 1 XLOC_100035 Coding TCONS_00163806 XLOC_100035 Coding Coding VEGFB 29:43155132-43157956 = TSS122705 1186 2 TCONS_00163806_2 131 6 0.582004959263195 1.14719268615218e-05 0.000101670540453889 9.36323432570758e-05 0 1.24886534373989e-05 0 7.37568927214465e-05 0 6.65272397002685e-06 0 3.86034681671112e-06 0 0.000626596381438662 1.1898820836402e-05 6.79610739149465e-06 0.00160340052425233 0.00239375152672811 0.000169247271676318 0.00015720417865073 4.24451139532511e-05 0.000168936264963226 0.00208354413279251 0.000672970645336497 0.00038165590716806 0.000554978379188023 0.00102771139932328 3.45817659815257e-05 4.85927785323907e-05 0 1.01386907975399e-05 XM_005227219.1 VEGFB PREDICTED: Bos taurus vascular endothelial growth factor B (VEGFB), 0.0 2028 100.00 0.946880269814503 NM_001243733.1 VEGFB Homo sapiens vascular endothelial growth factor B (VEGFB), 0.0 1135 85.54 0.828836424957841 TCONS_00163806_2 sp|Q9XS49|VEGFB_BOVIN VEGFB_BOVIN Vascular endothelial growth factor B; 1e-50 164 84.00 0.755725190839695 1 coding 0 0 0 0 -0.0216684039562753 0.850358501316362 0.0627555360761812 0.347425973683828 GGGGAGAAAGACATTGCCAAGCCCTTCCTGGAGTGCATCTTGGTCCAGATTTCTTCTCTCCTACAGGCCCCCGTCTCCCAGCCTGATGCCCCTGGTCACCAGAAGAAAGTGGTGTCATGGATAGACGTGTATGCTCGTGCCACCTGCCAGCCGCGGGAGGTGGTGGTGCCCCTGAACATGGAGCTCATGGGCACTGTGGCCAAGCAACTGGTGCCCAGCTGCGTGACAGTGCAGCGCTGTGGCGGCTGCTGCCCTGACGATGGCCTGGAGTGCGTGCCCACTGGGCAGCACCAAGTCCGAATGCAGATCCTCATGATCCAGTACCCAAGCAGTCAGCTGGGAGAGATGTCCCTGGAAGAACACAGCCAGTGTGAATGCAGACCAAAAAAACGAGAGAGTGCTGTGAAGCCAGACAGCCCCAGGCCCCTCTGCCCACGCTGCCCCCAGCGCCGCCAGCGCCCTGACCCCCGGACCTGCCACTGCCGCTGCCGACGCCGCAGCTTCCTCCGTTGTCAAGGGCGGGGCTTAGAGCTCAACCCAGACACCTGCAGGTGCCGGAAGCTGCGAAGGTGACAAACTGCTTTTCAGACTCAGTGGGGCCCCTAGCCTCACAGCCCTCCCCCCAGAGAGGGCAGGAGGGCAGCCTGGTGAGAACCGTCCAGTCGCCAAGACCTCAGCCTGGGCAGAAGCTCCTCCGGGACCTGGGCCTCTTGGAGGGCCTTCCAGCTGCCCCTTGTCTCTCCAAGGCTGCCATCCAACAACGTGGACAGAGTTGGATGAGGAGACCAAGAGGGGTCACATACCAACCTGGAAGAGAATGGGGTCCCGACTCAGATTTAAACCACCTTGTACAAGTGAGCATCTAACAGCTGGCTCCTCTGTCCCCTCACTGAGAAGACCCCAATCCTCTACAAAAATGTGGGAGTTGGGCTTCAGCGCAGGAACTGTGAACCCCAGTCCTGATAAAAGAGATGGAAGGAACTGTCCCTGCCTGTGTCACTGTCTGTCACTGTCCAGGCTGGCTGGTTTGGACATCAACGTCTGCATTGTACTGACACGGAGCTTGGAGGAGATGAGGTCCAAAGACCCCCCACAACCAGTCACAGTGCCAGAATCGTGCATTCTTTACTTTCATGTTGCGCTAACGGGTCCTGCTCCTGTGTCCATCACAAGGGTTCCTTTCTGA EMBV3_12828 CATTTGAAGTGTTTCCGTGGTTGCGTGAGCATTAGGCAGTGTGGCTAGAGAGGATCTACC Gene GeneID:615371|NFIA:NM_001038209:78_cdna Constitutive 1 NULL GeneID:615371 3 GENE NFIA MGC128467 nuclear factor I/A EMBV3_36151 GTGCCAAAAAGCATGGATTACATGCATATGGATGTTTACAGTCCTGAAGCAAATTATCTC Gene GeneID:280847|LUM:NM_173934:11_cdna Constitutive 0 NULL GeneID:280847 5 GENE LUM NULL lumican EMBV3_23903 GCTAGTGATGGTCTCCCTGTCCTTGGCGACAAAAATATTACAGTGTTCCCTTCCAGCTCC Gene BVT0101_000959 + 0 NULL GK000005.2:89509796-89554511 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195870 TCONS_00195859 TCONS_00195868 TCONS_00195860 TCONS_00195863 TCONS_00195864 TCONS_00195867 TCONS_00195862 TCONS_00195865 TCONS_00195861 TCONS_00195869 TCONS_00195866 1 XLOC_118161 Coding TCONS_00195868 XLOC_118161 Coding Coding PDE3A 5:89550806-89920848 j TSS145866 10134 1 TCONS_00195868_15 979 0.0362147227156108 17 0.972659786347999 0.00380316004030269 0.00403924909821628 0.00258732867354901 0.00184235388817105 0.00202035089872714 0.000517945238589293 0.00192039674048996 0.000935563690403332 0.000372760987287017 0.000653849133594214 0.000173142272800462 9.87598153705766e-05 0.000167360662854689 0.00200118028627556 0.000886508873324497 1.5334171180144e-85 0 6.48118716845975e-77 0.00294194919892269 0.00293468939682361 0.00105232291364126 1.49768058285281e-28 0 0 0.00277413750756786 0.00148963905317813 0.00140184827176927 3.66882715844089e-05 1.70049212625144e-49 9.71489496313434e-06 XM_002687752.2 PDE3A PREDICTED: Bos taurus phosphodiesterase 3A, cGMP-inhibited (PDE3A), 0.0 1.156e+04 100.00 0.632129465166765 NM_000921.4 PDE3A Homo sapiens phosphodiesterase 3A, cGMP-inhibited (PDE3A), 0.0 6066 80.64 0.632129465166765 TCONS_00195868_15 sp|Q14432|PDE3A_HUMAN PDE3A_HUMAN cGMP-inhibited 3',5'-cyclic phosphodiesterase A; 0.0 1576 91.60 0.917262512768131 0 coding 1 0 1 1 -0.220090369938201 0.127636343033433 0.0285164947784571 0.702785712777347 GAAGGGGACGACAAAGGATGAAATGGTTGGATTGCATCACCGACTCAATGGACAGGAGTTTGAGTAAATTCTGAGAGTTGGCGATGGACAGGGAGGCCTGGCATGCTGCAGTCTATGGAGTTGACTGCAAACAGTTGGACGTGACTGAGTAACTGAACTGAACTGTCTGGAGAAAATGGACAATTTTTATTTCTATGTGGTTGCTCAGTGTCCACTTTACGTGTTGGGTTTGATTTCATTTAATATGTTACATACACTGCTAGGCACTTCTTTCAGGTAGTACAGCTCTGCAACTTTTGGCATCTACCTAAGAAGATTTTATTGTTTTCATTTCCCTGCCTCCAGATTCTGGATGGTAATGCCAGGAGAGGTGGAATCTACCTTCTTTTCTTTTGGTAGAAAAAATAATTTTCTGGTTGTGAGGCTTACTGAGATTTTGGAGAAACCAGGACACTGCCTCTATAATACAATGGAACATTTCAAGAATGTAATTAAGATACAGACCTAGTGTTTCTGTTTTGCTGCCATTAACAGATGCCATTCTTATGTTCTCCTGGTCACAATGTTTCTTTCATATCTACATTCCATCTCTTACAAGTTCAGTTTTTATGGTGATTTATTGTTTTTTTCCTAAAGAACTGAGATGCTTGTGGCAGTAGGGTACAGGGAAAAATGGAAATACTCTAAAATTCTCACTATTCCTTTCTTGCTAATCTTGATATATGCCCAGATCTTAACAGTTTTTCATTTTAATATGCTCTTCTTGATGGCAGTGAATTTCATCACGATATTCCAATCAAGGCTTTTCACTCAAATGTTTCAGGTAGGCTCTGGCATATGAATCATATGTCTAAAAAAGAAAACTCAGAAAAGCGGCAGGCTAGGGGCTCATTTGTCTTTGGCAAAGAGATCGTTGCTCCTGTTTAATTATTAAACAGATGGTGCCCACTGCCATTGACTAGCTGCCCAACTTGTTTTCCATGTGGTAACACGGTTCTGGACATCTGATGGAGAGAAGCTGTATTATCACAGTTCCTCATATCCACTTACACCCTGATTTAAGTATTAACATCTGCCCCAAACTAAAGCAGGCTGTTTCCAACAAAGTTAAGCTTCAGTTTTAAGCTAACTTCTCCCCTGTCTCATGAATTTTCTTTTTCAGTATCTCCTTTATCTTTTCTTTAGATTGCTTTATCTCTACACATAAAATACAATAGCATATTGAGCCAGTTGGGCTTCCCTGGTGGCTCAGACGTTAAAGAGTCTGCCCACAATGCAGGAGATGTAGGTTCCATTCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTCTTGCCTGGAGAATTCCACAGACAGAGGAGCCTGGTGGGCTACAGACCATGGGGTCACAAAGAGTTGGACATGACTGAGAAACTAACACTTTCACTTTTTTTTTTTTCACTTTCATTGAGCCAATTATCCAAATACTCCAGCTTCCACACACACTTTACCCTGGAATGTTCAGATAATTAAACAAAATTGGATTATCTTTATTATTATTAGTGAGGGCAAATTACATTTAAGACAGCCATATTAAAAATTAACAAGAGTGGACTGGTCTTGTGTTCAGTATTTAAAAAAAAAACAACTTTCCACACTGATGGACTTTTTAAAAAGATACTATTTTTTCATAATCTGCCAAGAGTTAGCTTAAAATTTTTTACTTTTAGTTTCTCAAATTCAACATTATTACAGCGTAGGAAACGTGTAGCCTATAAACATGAATAACTAGGGTCCTGGTTTTTTTTTTTTTTTTTCCACAAGCTTTTTTCATGGTAGACAATTTCACCATAGGCAGCTTTTAAGATCTTTCCTAGTGTTAACCTACCTGTTCTTATCCCCCCACCCCCACTTTGAGATTTTTTAAATATTTCTGATTGTTTGAGCTTCCTTACTTTGTACACTTCTCTGAGGCTAGGGCCACTTAATCTCAATGTAATTTACCATCCATCATCAACAACTGTTGACTAATACTCTCATACACTGTATTTTTTAAAGTAACAACAATAACAAGAGAGCTGTCCCCTTCCCCCTTCTCTTTAATAATGCTATTTGAGTCTAGGTAACTTGTTGAAATTTTCCATTGTTTGGACCAACAGGAAAGCCTAGGTTCTCTGTCGAAACAGACCTTCCAGCAGGAGCAGTCAAGGCCTTACAATGCCCCCTGACATTGATTTGCTGTTGGACCTGACTTGAGTCTATAAGCATCTTTGAATCACCCAGACAGTAGATGTGGCTGTCATTTTTCAGGACAGTGGGAAGTCTGCGGACTCCCCTCTAGAGATAAGTATCCAAGCACCATCCTTTTTTCACTCCAACGTCCTGGGCAGCCCTGTGTGAGGGCCAGCCTGAGACCCTGGACCCCGGGGGCTGAGAGTCCGGCGGTGGACGGGTCTGAGCCACTCCTTCCCTAGGATGCTGGCAGAGCAGCCCGGCTCGGCTCCGGGGAAAGAAGCTCGAGCTAAGAAGAGCGCCTCCTCCGGGGAGGGGCGGGAGCAGGGCTGGGAACGCTTTCCTAGGGAGTTGCCTTAAAGAAAGCAAGCGGGATTGCAGATCACTCCAGCTGCCTGCTTTTTTATACAGTTTTAATCAGTCGTCTCCACTCTCCTCCCTTCTGCAAAACTGCAAATCACCATCAACCCCGCACCAAAAAGAAGGAAAAAAAAAAACTGTAAATCTCCTTCTCCTTTCTCGCCCTCCGTTCCCTCCCACCCTCCCTTCCTCTCCAGCTCGCTCGCCCTCCCTCCCTTCCCTTGCGGCAGCCGCTCGTCTCTCCAACTGGGTGTCTCTCCGACGGGACTTAGCAACTTCTTGGTTATTTCTCAGCCCCTTTTCCGTTTTCACCACCTTTTGCCATGAACTGGACCGACAGACGCAGGAAAGGCTGTGCTTTCTGCCCCAGGGAATGGCGGTTCGCTTCCTGGGGCCGGGTCGGGGAGGATCGGCCGAGGAGAAAGAAAGAGTGATAGAGAAAGAGCTGCATTAAGGAGAGGAAGGGGGACCTCCGTCGGCTGCGGGCCCCTAGCGTGCAGCAGCACCCAGGATGGCTGCGAGCTCGCCCCGCGTCCCCGGCTCCAGCTGCGACCCCCGCACGCCGGACGCCTAGGGCGATCTTTAAAATCCTGAAGTCCGGAGAGACCCCGGAGGACCGAAGACGGGGGTGGGGGTGGAGCGGAGAATGCTGCAAAGCTTTTCCAAGAGAGAAAAAGAGGAAGTCTGATCGCTTCTGCCTGTGCTAGCTTTTCACTGGAAGGCGTCTCTTTGGAGCATCTAGCCTTCTCCAGGAGTTATTCGAAAGCTGAAACTTTCAGTGCTCGCGGGCCTGGGAGCAGGAGGGATTCCGAGGGTGGGATTGCGAGAAGAGCGGGCGTGAGCGCGCGCCTGTGTGTGTGTGTGTGGCGGGGTGGGGGCGTCGGGGGGGCCCTCGGGGACTCCGCGAAGAGGGCGCACCATGGCTGTGCCGGGCGAGGCCGCCCGAGTCGGAGCCACGCCGGGCCACTGGGAGGCCAGGCCGGCCCCAGCGGCCGGCCCCGCATCGCCCCGGGACGTGGGCTGCCGAGGTTGCTGGGGCGCCCGGGTTCTGCGGCCGCTCCGGCGCTCGCGGAAACTTTCCTCGGCGCTGTGCGCGGGCTCCCTGTCCTTTCTGCTGGCGCTGCTGGTGAGGCTGGTCCGCGGGGAGATCGGCTGTGACCTGGCGTACTTGGCCGGCGTGCTGGGGATCCTCCTCGCCAGGTACGTGGAGCAGATCTTGCCGCAGTACTCGGGGGCGGCTCCGAGGGAGCATTTCGGGTCCCAGCTGATCGCTGGGACCAAGGAAGAGATCCCGGTGTTTAAGAGGAGGAGGCGGTCCAGCTCCGTGGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGCATCCCCAGGGAACAGCTCATGGGGCATTCAGAATGGGACCACAAACGAGGGCCACGAGGATCACAGTCTTCAGGAACCAGCATCACTGTGGATATTGCCGTGATGGGCGAGGCTCACGGCCTCATCACTGACCTCCTGGCAGACCCTTCTCTGCCCCCCAACGTGTGCACGTCACTGAGGGCAGTGAGCAACCTCCTCAGCACGCAACTCACCATCCAGGCCATTCACAAGCCCAGGGTGAACCCCATCGTGTCCTTCAGTGAAAACTACACCTGCTCTGATTCTGAAGAAAGCTCTGAAAAAGACAAGCTGGCTATTCCCAAGCGCCTGAGGAGGAGTTTGCCCCCCGGTTTGCTGAGACGAGTTTCATCAACTTGGACCACCACCACTTCTGCCACAGGTCTGCCCACTTTGGAGCCTGCCCCTGTCCGGAGGGACCGTAGTGCCAGCATCAAGCTGCATGAAGCACCTTCATCCAGTGCTATTAATCCAGATTCTTGGAAAAACCCAGTGATGATGACTCTCACCAAAAGCAGATCCTTCACTTCATCCTACGCTGTTTCTGCCTCTAACCATGTAAAGGCTAAAAAGCAAAATCGACCAGGTTCCCTTGTGAAAATTTCACCTCTTTCCTCACCCTGTTCCTCACCTCTCCACGGGACCCCTGCCAGCAGCCCGGTCAGCAAAGTTTCTGCAGTGCAGTTCCCAGAGTCTTCCGACACAACTGCCAAATCAGGCCTAAGTTCTCACCGGGCCTTAACTTACACACAGAGCGCCCCTGATCTTTCTCCTCAGATCCTGAATCCACCTGTTATATGCAGCAGCTGTGGCAGACCATATTCCCAGGGGACTTCTGCCGACGGGCCCCTGGAAAGAAGCGGGGCAGCCATTCGGACACCAACCAGAACAGATGACATCACTCAAGTTACCTCTGATTATGAAACGAATAACAACAGTGATAGCAGTGATATTGTACAGAATGAAGATGAGACTGAGGGCCCCAGAGAGGCTCTGAGAAAGACATCATCTTGCAGCACCTACGCTCCGGAGACCATGATGTTCCTGGAAAAACCAATTCTTGCTCCTGAACCTCTTGTCATGGACAACTTGGACTCAATTATGGAGCAACTGAATACCTGGAATTTTCCAATTTTTGATTTGGTGGAAAAAATAGGAAGAAAATGTGGCCGTATTCTTAGTCAGGTATCATACAGACTTTTTGAAGACATGGGCCTCTTTGAAGCTTTTAAAATTCCAGTTAGGGAATTCATGAATTATTTTCATGCTTTGGAGATTGGCTATAGGGAAATTCCTTACCACAACAGAATCCATGCCACGGATGTCTTACATGCTGTTTGGTATCTCACGACACAACCTATTCCAGGCCTCTCAACTGTGATTAATGATCACGGATCAGCAAGCGATTCAGATTCTGACAGTGGATTTACACATGGCCATATGGGATATGTATTCTCAAAAATGTATAATGTGCCTGATGATAAATATGGATGTTTGTCTGGAAATATCCCTGCCTTGGAGTTGATGGCCTTGTATGTGGCTGCAGCCATGCATGACTATGATCACCCGGGAAGGACTAATGCTTTCCTGGTTGCCACGAGCGCCCCTCAGGCGGTGCTCTACAATGATCGCTCAGTCTTGGAGAATCATCATGCGGCTGCTGCATGGAACCTTTTCATGTCCCGGCCAGAATATAACTTCTTAGTTAACCTTGACCATGTGGAATTTAAGCATTTCCGTTTCCTTGTCATTGAAGCAATTCTGGCCACTGACCTGAAGAAACACTTCGACTTTGTTGCCAAATTTAATGCCAAGGTGAATGATGAAGTTGGAATAGATTGGACCAATGAAAATGATCGTCTACTGGTTTGTCAAATGTGTATAAAGTTGGCTGATATCAATGGGCCCGCTAAGAGTAAAGAGCTCCATCTTCAGTGGACGGAGGGTATTGTCAATGAATTTTATGAACAGGGTGATGAAGAGGCCAGCCTTGGGTTACCAATAAGCCCCTTCATGGACCGTTCCGCTCCTCAGTTGGCCAACCTTCAGGAATCCTTCATCTCACACATCGTGGGTCCTCTGTGCAACTCCTACGATTCAGCAGGACTGATGCCAGGGAAATGGGTGGAAGACAGCGATGAGTCAGGAGACACAGACGACCCAGAAGAGGAGGAGGAGGAAGCACCAAATGAAGAGGAAACCTGTGAAAATAATGAATCTCCAAGAAAGAAAATTTTCAAAAGGAGGAAAGTCTACTGTCAAATTACTCAGCACCTCCTGCAGAACCACAAGATGTGGAAGAAAGTCATTGAGGAGGAACAGCGGTTGGCGGGCATAGAGGACCAGTCCCCCCAGCAGCATCCCTCAGAACAGATCCAGGCCATCAGGGAAGAAGATGAAGAAAAGGGGAAGCAGAAAGGAGAGGAGACCCCAGCCCCAAAGCCAAACCAGTGACAATGGATAGGATGAGCTATGTTTCCAAACAGAGTTACTTGTCACACAGACTCTTTTCAAGCCAGCACAATACTTAGACACAACACTGTAGAAATACAAGAAGATGGGCAAATGGCTACGGCATTTTGGGATTCTTCGCATTTTATGTGTTTATTTTTACAGTGAGGTACATGACTTAAAAAACTCTCGCTCAGAGAAGCTTTCACATTGTAACACCAGCTTCCAAGGATTTTTTTTTTTTTAAGGAAGAAGTATATATGTGTGTGTGTATATAAGCTGTCACGTAGATCCATGTAAAACATATTCACAGACACACATGCAAACACAGACACACTGAAAGCTGGGATTCCTGGCCCCACAATTTAGTAACATTCATATTAAGATATATAGTGGTCACTGTGATATAATAAATCATAAAGGAAAACAAATGAAGGAAAACAAATCACAAAGGAGATGGTGCGGCTTAGCCCAGAAGCAGTACAGCAAATGAAGTTATGACTAAGGAGCGTTTGCTCTTAGTCCTGAGGGATGAAAGCTCCAGAGCGTTGTTTGAATTCTGATACATCCTGCCAACATTGTATGCGTGTGTGTGAGAGAGAGACAGAAGTGATGCTCAGGTGTATGTACATTTGTGTGCACTAAAGAGAGAATTGGCTTTGGTGGTTCACAGCATGGCTGCAGCAGACGACTCAGCACAGGTGAACAAACAGGATGAAGTGCACTCTGGAGTGTCTCCGCCTCTATCTGGCTTCAGTAGAAGCCCCTCTGCAGACGGAGGGAATTAGCAGGATGAGGGAGGGACAGGGCCACAGGTCTGGTTCTCCTGCCGTCGCCAGCCTTAAGCCCGGAAGACCGAGGCATTTTCCAGTCTAGTCGCCAAATGAATGTATACGAGCTGTTTGTGAGTATGTCTGCCATTCACCTAAGATCAATTCGCCATGGAAGGGGATGGCATTCTTTACACAGAAACACCTCAGAAGGAGCTGGAGTCAGGTCTTTTCATCAGGTGAGAATACTAAAAGGTAGCCAGAGAAGACCTGGGAAACGACTCTTCACTGGGCTCTCCCATGTCTTAATTTGCTGCAAAATGTGTGGTAGGAAAAGAAAGAAAGGAAGGCAAACAGAAACCCACTCTGGGATAGACAGTGAGAGATGAAGGGGAAAATTTTCAACCTAGGGTTTGGTATTTATTGACATAGTGAAAGCCTGATTCTTGGCGGCCGTTGAAGGTTGACTTTTAGTTGGCTAAAGTTGCACGGACAACCCTGTTGTATTCCATGAGGGGTGTGATGGGGTGGCTTGTATCTGCAGCCTGGCCCATTGTCATGTTTCTTTTGGCAGGGAGGACTCGAGAGGGATTTGGGGGATTGGGCCTATCATTGAAAGTCTTTTTTTTGTTTGTTTTTGGTTTGTTTATCTACACTTGTTTATGTTGTGAGCCAAACCTCTATTTAAAAAAGTTGATACTCACTTTCAATATTTTATTTCATATTATTATATATTTGTCATTAATAGTTATCTTGATGTAAATATAAAGATTTGTGTTTCTGTAGATAGTTAACTTTTTTTTTTAAGGGAAAAGGGAAACATTTTTATAAAGTTCTATTTTAATCACCATTTTTATACATTGTAGCTATCTCCAAACCCAGTAAGAGTGAAGGTTCATTTGCATGAGGTCTATGAACACCCACTCATCTACCTGTTCTAATTTAAATAATCATCTGATACAGTTATTTTATGCCAATTAAATGAGGATGCTGCAAACAACGTTTTTTCACTAGTAAGTAACTTCCGGTAACTCTTGGATCCGTGTCTCCCAAGCAAAAGACCGTCTTAATCCCGAATGTTTATAATCAGTGTCCCTTTCTTCCCAAGACTTTTTGCTCATAACTTTTCCTTCAGTACAGCACTATATTCAAGCCTGTTCATCATCTAAACAACCTTAGCTTCCAGTAAATCTAACTTGTAATTTCTACTTTTTATTTCCTCTGAAATCATAGAAAAGAGTGTTTACATTGAAATGCCTTTGTTTCTCACGAATGGATACTCTTCCCTTCTAAAACAATGATTATACAATAATCCATGGCATTCTTAAAGTAAAGCAAACATAGTACATTCAAAAATAAAGTTTCAAGGCAACTTTCCCAATAAGTAGGAAAATATGAAAATGATCAGATGGATGTAGGTTCTACCTAAATGAGATTTATTTTTTTTTAGTCAATACCAGGTCTTCATTATTTAGGACTTACTGAGTATTTTCCCCCTTGTCTTGCCTGTGTGTCCCTATGTTTGCAAAACTTACTGTGAGTCAAATACATTTCCCAAGCAAATTTAACTATTTTCCTTTCGTTGCAAATAACAGAAGGATTTAGAAAAGCACTTATATTCACATACCTCTTATATCTAATTACTTAACAAAGTTAATCTTTTCCCCTGCTCCAAATACCATAAATATAAAAGTCAAGGGGAAAAAAAGGTGTTGAGCAAGTTGAATGGCAGCAAAATACTTCTAAATTCATAACCGTGTATTGGTGGTTTCATCAAAGCTTGGTAACCCCAGCTAGGAGCCAACCTGGCTGCCAGAGTAGACGTCTAAGCACGTGGCCTGATTTTCGTTTTGTTTAAAGTACGTGAAATAATGATAGCTGAAGCAGTGAGAACCTCTTCATTCCAGAACTGTGCTCATTAGTCCAGGCAGATTAACCATTTGATCTTCCAAGATAAATTGCCCATGTGTTAAAGCTAAAAGTCAGTTCAAAAAAAGGAATGGAGATTCATCAAGTGTGTAACTTTCATACGACCCCTACCTACATCCCAAAGGATGCCGAGGGACATGAAAAGATACTTTCTGCTAGTGATGGTCTCCCTGTCCTTGGCGACAAAAATATTACAGTGTTCCCTTCCAGCTCCAAAGCTTACTTCCTGTGGTGCCACTGTATTTGTTGCAATTTACTACATTTTTATATGAGCCTAATTATAGGTGCCATTAGATAAACTCAGGTCTTACAAATGAAGGAACGTCCAGCCCTCTTACGGAAAAGGAGAATTGTATGGACAGCCATGAAGTTAATGGTAGGAAAAGTAGGAATTGGTTACCTTGATGCTTGTGGTCGCTCCCTGTTCAGTAAAAGACCAGGTATACTAAATATGTCACCAATATCATTTCCTGCATGCTGATAGAATGTCTTTCTGGTTATCAATCTAAGCCAACCCTGAGGATATATTGTTTCCTTGGTGAAAACACCACTTTAGCATATTTTTAAACTATAATTTGTTTTTGTAATTTACATAAGACCTGGTTTTGCTCTTAGTCGAAAATGAAGACAGTAGCTCTGTACAGGGATTTATCTATGTTGGTCTTCATCTGAGAAGTGAAGGAATTTCCTCATGTTATGTTTAAGAAAATATCTACTTTCTAAACACAAAAATCCCCATTATGTCTGTTCTGTTTTGATGGAATTCCTGAACAAATCCTAACCATTGCAGTCCCAGTAAAACTAAAGATAAGGCATTGTATGTCAAGTAGGCTTCATTGCACGTATGTATTGTCATTTCCTCACGCCCTTGCCTCTCTACAATTTGCAGTGTCCCGTGTCACCTTCCCAGAGAACTTTCATTGAAGGTAAAAGCTGTGCAAAAGGCATGAGACTCAGGCCTATTCTTTGTCTAAATGATGAAAAAAAATATAAATTATTTTCTAAGTAA EMBV3_16282 TGGCTGAAAACATTTACAATGATGAAGAGTCAGATGTCACAACACCGGAACTGGAGGGGC Gene GeneID:537402|RBBP7:NM_001034638:9_cdna Constitutive 0 NULL GeneID:537402 X GENE RBBP7 MGC129059 retinoblastoma binding protein 7 EMBV3_28745 GCCCTGCGGCCAGCTCAACACCACCTGCGGAGGGGGTTCCTGCAGCCTGGGGAGGTGCTA Gene GeneID:507421|KRT83:NM_001083385:163_cdna Constitutive 0 NULL GeneID:507421 5 GENE KRT83 K83 KRT81 Keratin-83 MGC139925 keratin 83 EMBV3_36633 ATCACCACATTTGGGTCTCTCAAGACCATTAAGTCAGCGTCCAGCACCACAGCTGCCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25549 GGGACCCAAAGATAACCGAGGTACTTTTACTTGCTTCCAAGGGCCTCATTCTTCCGCTGT Gene BVT0102_208240 + 1 EMBV3_03716 GK000001.2:128288219-128345226 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005171 TCONS_00005180 TCONS_00005170 TCONS_00005176 TCONS_00005174 TCONS_00005177 TCONS_00005168 TCONS_00005178 TCONS_00005173 TCONS_00005179 TCONS_00005172 TCONS_00005175 TCONS_00005169 1 XLOC_001198 Coding TCONS_00005168 XLOC_001198 Coding Coding RASA2 1:128342297-128390574 j TSS2554 5250 1 TCONS_00005168_4 441 17 0.891602452564421 1.79653559158332e-05 0.000136582014705365 1.03718105961803e-25 2.40354778615387e-11 1.57103343889097e-53 1.92474784500064e-12 0.000120795714649333 7.63121602290379e-05 2.14483279738514e-12 6.12730867522728e-31 9.3009882801398e-28 1.68536869858509e-05 3.91695900924241e-100 1.31927782155284e-05 1.85633346666074e-09 0.00321930570411093 0.000804851218499176 0.0014874471012114 1.65588284896117e-05 1.50143975584748e-05 2.00657399385298e-27 0.00137542313859068 4.99953335199275e-05 0.000653417211311781 7.77047455725828e-17 5.49631862906518e-81 1.92129416693208e-19 0.00056868411229698 4.1154005536954e-05 3.23937393506275e-05 XM_005201878.1 RASA2 PREDICTED: Bos taurus RAS p21 protein activator 2 (RASA2), 0.0 8711 100.00 0.919809523809524 XM_005247688.1 RASA2 PREDICTED: Homo sapiens RAS p21 protein activator 2 (RASA2), 0.0 5781 86.65 0.919809523809524 TCONS_00005168_4 sp|Q15283|RASA2_HUMAN RASA2_HUMAN Ras GTPase-activating protein 2; 0.0 863 97.48 0.988662131519274 3 coding 0 0 0 0 -0.135565622744796 0.387882312144652 0.00166804293505265 0.980014456483051 ATAAGCCAAAACAAAAACAATGTGTAAAATACTGTGAACGAAGGACTTAGAAGACAAGTGTTTAGGATCGACTTGTGGAACAATGGAAACCTGGTCCAAGATGTTTTCCTCGGTGAAATCAAGGTTCCTGTGAATGTATTAAGAAATGATGCCTCTCACCAAGCCTGGTACTTGCTACAACCAAGAGACAATGGAAACAAGTCATCTAAAACTGATGACCTGGGGTCCCTTCGATTGAATATATGTTATACAGAAGACTATGTGCTTCCTTCAGAGTACTATGGTCCTTTGAAAACACTGCTGCTAAAATCACCAGATGTTCAGCCAATATCTGCCTCAGCTGCTTACATTTTGGGTGAAATATGTCGAGATAAAAATGATGCTGTTTTGCCCCTTGTACGACTGCTGCTCCACCATGATAAACTTGTTCCTTTTGCCACTGCAGTGGCGGAACTAGACTTGAAGGAAACACAAGATGCAAACACAATTTTTAGAGGAAACTCCTTGGCTACCCGATGCCTGGATGAGATGATGAAAATAGTGGGAGGGCACTACCTGAAAGTAACATTAAAACCTATTCTAGATGAGATATGTGAATCCTCAAAATCCTGTGAAATTGATCCTATTAAATTGAAAGAGGGAGATAATGTAGAAAATAATAAGGAGAATCTGCGCTACTATGTAGACAAGTTGTTCAGTACAATTGTCAAATCAAGTATGAGCTGCCCCACTGTAATGTGTGATATCTTTTATTCTCTAAGGCAAATGGCTACTCAAAGATTTCCTAATGACCCTCATGTTCAGTATTCTGCAGTGAGCAGCTTTGTATTTCTTCGTTTCTTTGCTGTAGCAGTAGTATCACCTCATACTTTTCATTTGCGACCTCATCATCCAGATCCACAGACAATCAGAACATTAACTCTCATCTCAAAAACTATTCAGACTTTGGGAAGCTGGGGGAGTCTGTCCAAAAGCAAGTCAAGTTTCAAAGAGACATTCATGTGTGAATTTTTCAAAATGTTTCAAGAAGAAGGATATATTATGGCAGTTAAAAAGTTCTTGGATGAAATTTCATCTACTGAAACTAAAGAGTCCAGTGGTACAAGTGAGCCTGTGCACCTGAAAGAAGGTGAGATGTATAAAAGAGCTCAGGGAAGAACTCGGATTGGAAAAAAGAATTTCAAGAAACGGTGGTTCTGCTTAACAAGCAGAGAGCTCACCTACCACAAGCAGCCAGGTAGCAAAGATGCAATTTACACAATTCCAGTGAAAAACATTCTTGCTGTGGAAAAACTGGAAGAGAGCTCTTTCAACAAGAAAAATATGTTCCAAGTGATACACACGGAGAAACCACTCTATGTCCAGGCAAATAATTGTGTAGAAGCTAATGAATGGATAGATGTGCTCTGCAGGGTGAGCCGATGCAATCAGAACAGACTCAGCTCTTATCACCCCTCCGCATATCTAAACGGAAACTGGCTCTGCTGTCTGGAGACTAGTGAAAATGCTCTCGGCTGTAAGCCGTGTACTGCAGGTGTCCCTGCAGACATACAAATAGATATTGACGAAGACAGAGAAACAGAAAGAATTTACTCCCTTTTCACCCTCAGTTTACTTAAGCTGCATAAAATGGAAGAGGCTTGTGGAACTATAGCAGTCTATCAAGGACCACAGAAAGAGCCTGATGACTATTCCAACTTTGTAATTGAGGATTCTGTAACAACCTTCAAGACAATTCAACAAATAAAAAGTGTCATAGAGAAGCTAGATGAACCTCATGAAAAGTATAGGAAGAAAAGATCAAGTAGTGCAAAATACGGGAGCAAGGAAAATCCAATCGGGAAAATATTTTAGAGTTTGGCCAATTGATTCGGAAGAACTGGAAGATATTTTAGTTGGAGTTTTTCAATTCATCGTGTATTTTGTTCATAGTATTTAAGAATGAACATCGGCTTCACTGTCATCTGCATTCACATTGTATTTAATATTTAATAATTGAAACTAACTGTTTGGAAATTCTGGTGTGATGTTTCACTAGAGAATTTAAAACCCAGGATTCCCTTCATATCTTATGTGTCGAAAGCCATGTTTCTGCAACTTCTTTTTAATAGAAAGACTCTTCCTAAAGAAGCTTTATAACAAAAGGAGAACTCCTCCATAGCAAGAAACCATCTCTTCTTGTAACACTCCATGTTCTGTGGACTTTTCACTACCATTAGTGCCTGCTCTATACTGCCAACATTGTGTTTTACTAGAAAATTTCAATCCATGACTATTCAGAGCTTTCCGTTTAGTTCATCTAGACCCTTCCTCTTCAAAAAAAAACAAAAAAGATCTCCTTTGGCCCATCGGTCATTACAGATTACATTAGAGACAGTGACAGAAACTTTAGAAACTACCACAGTATCCTTGGAAGTTGGTGGACCCTTTTACCCATTTAGAGATGCAAACAGCTCAGATAGGAGAAATCAGGGAACATGTACTGTTGTCTGCATCTTGTTTACATGTGGGATGAGTGATGGCAGATGAAATACAACCAGACCACTAAATTTTTTTTCACCGTTTAAACATCAGGTACTCATATTTTTGATTTGAGAGTTCAGGCTGTTGTGACTTCTAAGGACTTCACTTCTGAAAAAGAAGAGAAAGTAAACAGTGGGGACAGGTGGTGGTACAATCACTTGACTTCACTCGTTGCCCCGTCATTATAAGGGCCGCCACCACGGGACGCCCTCCTCCCCACGTGAGGGTGAGATCCAACTCGAGGACAGTCACTCGGTGCACTTTACTCATCTGGGCGACCCCAGATTATGCTTCAGATACTCCATGGTATCTAACCTTTATGATCAGTTGAATGATCAGTGTTTAAGTCTAGAAATAATGCTTTCTTGAAAATGTTTATATTTCACTGCTGTTTCCTTATTGCCTGCTAGCCAAATGGAATTGGGCAAGCAACTGTTTGAATCCTGTTTTTCCCTAATAATTTACCTTTATCCTAAAAATCACAACTGTAAATAAGCAGTCGAAGCAAGTGGCCACCTTGAAGTTAAGAGGAATACACTTCGCTTCATCAGTATTAAAAACCATGGTACTCTTACTACGTGTTTTTAAATTCAAAACATTTTCTAAATGTGGTACTTTGAACCTTGGAGTATTTTACACGTTTCTGTTTAAAACTGTGACTTATTAATGTAAGTCTAGCTAGTAGTGCTTTTTTGTTTCCCTGAACATAAGCTATATTTCAAGATACACTTTGCCAATTATGTTATTGGTGAGTGATTGTTTTTAAATTATAACGTTACTGGGTAATTATTTTTAAAGACCATTGGCAAACAATCAAAGTTCCATAAATGATTACAACTAAGCAATGTATTTCTCTAAAGGACTTGTAAAAATCAGTTAGTTTTATTTAAGGATCAGTCCTAGTCTGCATTAAGTTATTCCTGGCCCATTTTAAAGACAAGTTTGAAAAAGACTTTTAAATTTTATGAATTTGTAGATTCCATAAACTCCACTGATTAATCAGTGTGAAAGAATTTTACTGTTTTAATCCATTTCTCACTGTTGAATTTTATTCAGATTGAAATTTCCTTTTCAGAGTCTCTGAATGTACGCCTGGAAAGGCCATGTGAGCATTGCCAGGTACCACTCATTGCTCTCCAGTGGCTTCTTGACTTATATTCTGACATTTCTAATATCAAGCCCTTGGTAACATAATACCAAGTTATGACTGTTTTTAAAGATCACAGTGTTCTCAAAGGGACCAAGGCTGTCTGAATATGTAACTCAGAATTTGAAAAGAATTCAGTTACTAGTTCTTTTCTTCACTTTTAAACAGCCAGTTTGACTGGAATTAACCACCTTGGCACAGCCTAAAAACAAGTAATGTGAAATGAAATTTTCTTTGAAAGTCTTCTGAAATAAGAGACCATGTCAGTGGGACCCAAAGATAACCGAGGTACTTTTACTTGCTTCCAAGGGCCTCATTCTTCCGCTGTTACTTATGAGTACTTTGATTTTTACTACCTGATCTGCTTTCTCTCCCTTTTCCAAACTTGAAAAATACATGGCAGCTCACTTTACCCTAACGCCGTGAAAACCCCAAGAAAGCAAGCAAAGGATGATCCGGAGGAACTCTTGCCATAAATGCCGACTTGGTTCTTAGTTTAGCCATTTCCATCATTTGAAATTATGGTGGCGTGTCGCTTGTTTTGTTGTCATCGTTTGTTCTTTGTTTAGCTTTGTTTTTTAATATTCATTTAATATGATAATAGGCAATAGCAACATTTTTTTACTCCCAGGAATATAATTTATCAAATTGAACTATTTTCTTTGCCAAAGAAGTATGTTTATAATATCACGGGTAATGATTTAAGTGTCAAAACAAGGCTTTGCTTATTGTACAAAAAAAAAAAAAGGGTGATGAATGATGTAGCTTTTGTTTCTGTTTCTGAAGCCTAATTTCATTCATTTTTCAGAAAGGCTTATTCATGCCAGGTTTTAGAAGACAGATGTCATTTTTAAGTAAAAGCACCTTTAATTTGTTCTAACGGTACATCCTGTAAAGACAAAAAGCCTCAAAGCCTTTTAGGTGTCCTTACAGTATGTGAAAACTACAGGACTCATTCTAAATTACCAGTCTCGATTGATACTATCTGCTTCCATTTTTATTAACTTGGAAATTAATATGTTGCTAGTAAATATTGGTTTTTACAGTGTCCAGTTTGAAAATGTAAGTTATCAAAACTTAATGTAGTGAATTTGTGTAACCATGTTGTACTGTTGAGAATGTATTTTTATTTAAATTTTATTTTCTTATCAAGAGTATTATAAAAATTAAAAACTTTTGTAGCTGTTGCTTGGAAATAACAAATAAATTACAAGAAGCCTGTCCACTCTCTGCGTGACCTCACTTTCTCACTGATGTGAGAATCTCTGCTCATTAGAATGACCATAACTCACCTATTAGGAAGGGAATAGCAAGTGAGGAGTCCTCAATGACAGAAGAGCAAGCCATCTGAAAAGGGTGCAGAAACCTCCTGCGGCGTTTATCTGGGCTGGTTGTTTGGACCGAGGCCCTTGTTTGTTCATTCAGCAGACTTGTCTGGAGGACCTGCCGTGTGCAGGACCCGTCGTTCCCGAGAGCCGTGCACGTCCAGTATGTGGGGGTATGTTCCACTCATCTGAGTCCACAGTTTAGAGCTGACTTGTGCCCCCAGTGAAAGGAGCCAGGATCTTCCCCATTACTAC EMBV3_28728 TTTTTATAGATAATGTCTCTCTGGGGCTGCGATTGTCCCCTTCCGGCTCTGGCTGCCTAT Gene BVT0102_285429 - 1 EMBV3_12393 GK000026.2:15070688-15096224 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00206812 TCONS_00066283 TCONS_00231338 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00175855 TCONS_00177370 TCONS_00169198 TCONS_00250930 TCONS_00175580 TCONS_00008224 TCONS_00021569 TCONS_00137878 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00038458 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00062744 TCONS_00109027 TCONS_00155780 TCONS_00000305 TCONS_00251707 TCONS_00130084 TCONS_00037818 TCONS_00064462 TCONS_00039226 TCONS_00178325 TCONS_00167260 TCONS_00040836 TCONS_00010054 TCONS_00065823 TCONS_00140840 TCONS_00209032 TCONS_00110323 TCONS_00063486 TCONS_00207365 TCONS_00020756 TCONS_00249772 TCONS_00010471 TCONS_00021595 TCONS_00157613 TCONS_00088088 TCONS_00117619 TCONS_00199424 TCONS_00155778 TCONS_00059708 TCONS_00071033 TCONS_00161835 TCONS_00198813 TCONS_00177281 TCONS_00170823 TCONS_00116665 TCONS_00249569 TCONS_00250579 TCONS_00249087 TCONS_00231612 TCONS_00070810 TCONS_00107832 TCONS_00222114 TCONS_00131550 TCONS_00199037 TCONS_00122479 TCONS_00122686 TCONS_00157036 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00252353 TCONS_00224113 TCONS_00197928 TCONS_00007677 TCONS_00229957 TCONS_00250720 TCONS_00116100 TCONS_00169197 TCONS_00038381 TCONS_00222766 TCONS_00242885 TCONS_00207069 TCONS_00252810 TCONS_00175546 TCONS_00023373 TCONS_00209711 TCONS_00116172 TCONS_00252107 TCONS_00148280 TCONS_00249011 TCONS_00176735 TCONS_00031939 TCONS_00039951 TCONS_00169199 TCONS_00131137 TCONS_00155779 TCONS_00063181 TCONS_00009259 TCONS_00111497 TCONS_00209636 TCONS_00020017 TCONS_00019961 TCONS_00233372 TCONS_00153218 TCONS_00240534 TCONS_00123168 TCONS_00085967 TCONS_00039904 TCONS_00207755 TCONS_00199802 TCONS_00250246 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00200529 TCONS_00115148 TCONS_00250726 TCONS_00142649 TCONS_00122313 TCONS_00020023 TCONS_00007359 TCONS_00218552 TCONS_00166449 TCONS_00031910 TCONS_00251929 129 XLOC_107421 XLOC_069855 XLOC_125332 XLOC_040997 XLOC_140827 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_105634 XLOC_107144 XLOC_103305 XLOC_153873 XLOC_105361 XLOC_003782 XLOC_012242 XLOC_084087 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_022282 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_037471 XLOC_064932 XLOC_094822 XLOC_000084 XLOC_154648 XLOC_078795 XLOC_021647 XLOC_039186 XLOC_023044 XLOC_108098 XLOC_102096 XLOC_024650 XLOC_005606 XLOC_040542 XLOC_085269 XLOC_127543 XLOC_066227 XLOC_038213 XLOC_125882 XLOC_011431 XLOC_152715 XLOC_006022 XLOC_012268 XLOC_096068 XLOC_052875 XLOC_071785 XLOC_121077 XLOC_036490 XLOC_042806 XLOC_098720 XLOC_120466 XLOC_107055 XLOC_103665 XLOC_070831 XLOC_152512 XLOC_153522 XLOC_152030 XLOC_141100 XLOC_042587 XLOC_063742 XLOC_135423 XLOC_080255 XLOC_120690 XLOC_074034 XLOC_074241 XLOC_095496 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_155294 XLOC_137409 XLOC_119588 XLOC_003238 XLOC_139451 XLOC_153663 XLOC_070269 XLOC_022206 XLOC_136073 XLOC_149548 XLOC_125588 XLOC_155751 XLOC_105327 XLOC_014040 XLOC_128222 XLOC_070341 XLOC_155048 XLOC_090162 XLOC_151954 XLOC_106509 XLOC_018184 XLOC_023768 XLOC_079842 XLOC_037908 XLOC_004815 XLOC_067397 XLOC_128147 XLOC_010695 XLOC_010639 XLOC_142854 XLOC_092983 XLOC_147198 XLOC_074722 XLOC_052005 XLOC_023721 XLOC_126270 XLOC_121454 XLOC_153189 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_122181 XLOC_069449 XLOC_153669 XLOC_087074 XLOC_073868 XLOC_010701 XLOC_002920 XLOC_131872 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00209032 XLOC_127543 NonCoding NonCoding - 6:64152219-64153072 - TSS156539 853 5 TCONS_00209032_3 52 0.998827667057444 1 0 0.000107999636877353 1.19149476583088e-05 2.77977361639031e-05 7.42310905705153e-05 7.42958473863742e-05 8.29962906229326e-06 8.28814847992459e-06 2.14954933166912e-05 3.66837127035834e-05 3.34088975402152e-05 9.6624329663661e-06 5.30274005361289e-05 1.35671438855644e-05 9.77799863791822e-05 5.64380255512048e-05 0.000967589294690976 0.000241963569057791 0.00217517217184346 2.34687726319461e-05 2.10768795184397e-06 7.7643663881918e-06 0.00243679562207728 0.000415699164541666 0.000345529510950997 1.33440787334988e-05 7.22718768678785e-06 1.20285354067589e-05 0.000120696340149773 7.33536840209947e-05 0.000127428579407952 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-29 134 83.87 0.144196951934349 0 noncoding 1 1 1 1 -0.0633622171091176 0.579861142912628 -0.0149585236604085 0.812391044970016 CGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTTGGTGAGCGCCAATGCTGCGACTTACCGCCTCGCTGCCACTCGGTTTTCTGGTTGTAACACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCCGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGCGATTGCCCCCTTCCGGCTCTGGCTGCCTGTCACCGGAGGGGGAAGGTCTGCAGCCGGCTATCTCTGTTCAGTCCTTTGTTCCGTGCGCGGGCCTGACGGTTTTAGGTTAGGACTGGCTTTTCGCGTGGTAGATATCCCACAGTCTGGTTTGCTAACCCAAATTATTTCGCTCAGATAGCGCTCAGGGTATTCAGGTCAGATTCTTACTCTCAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCTGCTTGCTAATGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGAAATCTGCGAGTTTTAATTGTTTATTTATTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTCGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGATTCCCTTCCCGGGACGGAGCTCCGTCCCTCCCTCTTTTGTCTCT TCONS_00205327 . 3' 333887 TCONS_00205327 . 3' 334739 EMBV3_36845 GTGGAACGTTTGGTACTGTTTGCGTCCGGCTGTGTGCCTATTACCTCAGCAGTCTCACAA Gene GeneID:512019|ANGPTL2:NM_001109814:70_cdna UTR3_Alt 2 NULL GeneID:512019 11 GENE ANGPTL2 NULL angiopoietin-like 2 EMBV3_22443 CCTTATGTCTGTTATGTGTAAATATCACTGTGGCTGAAATTTATGGGGTGGAGTGGTCTG Gene BVV0102_100589 + 0 NULL GK000004.2:28456953-28471877 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183480 TCONS_00183475 TCONS_00183470 TCONS_00183473 TCONS_00183481 TCONS_00183479 TCONS_00183478 TCONS_00183471 TCONS_00183474 TCONS_00183483 TCONS_00183477 TCONS_00183476 TCONS_00183482 TCONS_00183472 1 XLOC_111160 Coding TCONS_00183474 XLOC_111160 Coding Coding TMEM196 4:28469450-28792417 j TSS136901 3194 1 TCONS_00183474_2 168 0.0347526612398247 7 0.990132088207427 0.00257327890906217 0.00143698460314803 0.00187125911794355 0.00101685891224193 0.0011863771556874 0.000399470859789434 6.84570979933028e-05 0.000810956228622158 0.00214245701034061 0.000200466667305357 2.83284229112482e-05 7.8419512128277e-05 0.0004406009843536 0.00079926440841529 0.000593771795925224 5.14369879274669e-15 0 0 0.00168133428769899 0.00136177775658454 0.000453428219511008 0 0 7.23369821215232e-14 0.00162215445878117 0.000897643538379816 0.000439916808771792 4.80774644466679e-10 1.41842774796069e-09 4.26901816557053e-45 NM_001206771.1 TMEM196 Bos taurus transmembrane protein 196 (TMEM196), mRNA. 0.0 4486 99.96 0.779273638071384 NM_152774.3 TMEM196 Homo sapiens transmembrane protein 196 (TMEM196), mRNA. 0.0 987 77.88 0.388541014402004 TCONS_00183474_2 sp|Q5HYL7|TM196_HUMAN TM196_HUMAN Transmembrane protein 196; 5e-71 216 95.58 0.666666666666667 0 coding 1 0 1 0 -0.275178257037356 0.0499627952774737 -0.102929813412063 0.0659585295946643 TTCCCCCTATAACTGGTAACCTCCCCCCTCCTCTGGGGAGTGAAATCTGCCACTCTTTCCTTGCTTTCCTCTGCACATGTTCAGATGTCACTCCAGAACCTTGCTTCAGACAAGAAGAAGAAACCCTGGAGCCTGAGATACTGTTGTGCCTAAATGATAAAGGGATTAGCTTTTGGCTTTTGAGTATCAGCCCCTGCACTGCATTGCATGATCCTGTTGAACAGAAGACCACCTGGTAAACCAGATAACCAGATGCTGTTCAGCGAACACTTAACTGTGATCTCTGAAAGTCACCAGTTGATGAACAGCCAACTGGATCAGTTTCTTCTTTGTGGCATATGTGGAATATTGTGCGCCAAAAAAAAATCTGGACTTGTCATGATCCTCTTTTCTGCCTGCTGCATCTGCGGGCTCATTGGGGGCATCCTGAATTTTCAGTTCCTCCGGGCAGTGACGAAGAAGACCTCCTCCCTCTACCCGCTGCATCTCGCCTCCATGTCTCTCGCATGCATTGGGATCGGAGGCTGCACCCTCTCTTCGTGGCTCACTTGTCGACTAGCCAGCTATGAACAGAGGAGGATGTTCTCAGAAAGGGAGCATTCTCTGCATCACTCTCATGAAATGGCTGAGAAAAGATTGAGGGCTATTGAAATAACCGACTTGCCCAGCTGCCCGGTGGTGCCCCCGACACCAGAGTTACCTACAAGGAAATGACAGACAACATGAGCAATGGAGGACCACAGCTGATATTTAATGGAAGAATATAATCAATATTTTAAAGAACTGAACATTTTTCATGAGGCAAAGAAAAACCAAAGGACTAGGAGATAAGTTAAAATAGTTCTTGCATTTGCTGTTCTCTCTCCTGAGTACTCGCTGAAATTCTTCTTCAATTTTGCCTCACTTTATTTCTTCAGCTTTTTTTTTTTCTTACTGGTGAAAAACTTTCCAGAAATATTCTAATACAGTAATTTCAATCAACTTTCCACACCATTCTATAAAAGACTTTCCAGGAAAGAAAAAATAGATAAAATAGAAAGATTCATATTCTACACAAACACTATTTGACTAGCATGAATGTTAGATTTGTAATGACATATTTCATATAAGTAATTAAAAAGTATAAATATCAAGAAATAACAATAACTTACCAATGTCTTTGTTCTGAAAGACGATGGCTTCAAAGAATGCCACAATTTAAAACCTCAGCAATGCCTTGTTGTAAAAACATTGTAATTACTTTCAATTTATGAATGAACTATGTTTCATAATTTTCTTGTAAATTAACAAAACACAAAACATAAAAAGAGGGTTTTTTTTTAGAGAGAGAGAGAATACTAATCTGTATGGTATTTTTGCACAAAAGAACAGAGAGTTATAAATGAATATCACTTAAGGAAAAGAAGTAACTTTTGATTATACTGTGCAGATTGACATGCATGTTCGTGAATGAGCCTAAGAATAAAGTATCTTTGTGTGTATGTGTATATTTGTAAATATAGAAAATATTATATAGCTCATATTTATAACATTCATGGATGTAAATATGTAGTAGAAAAGAAATTGTGATACTGTGGGAGTATTATCAAGATTCTATTCCCATAGAAATGGGAAAGTGGTTTTTCAAGACTTTTCTCTGCCCACAGAGTCACATTTAATTTCTACTAAATTTTCTTAGTTTTATTTCTTTCATTATGTCTGTTATGTGTAAATATCACTGTGGCTGAAATTTATGGGGTGGAGTGGTCTGAATAGTATCAAGACAAACTGCTTAAATATTTGGCAATCTATTATTTTGGTATTTATGTAAGAACAATTAGTATTGATTTATAAACATAATTTAATTCAGATACTTCCATGTTTATAAATATAGATAGAATTACTTGCAATTACGACACTTATATTTCAAATACATTATAGCCCAATTAAAATTATATAAAAGGACAATTATTATTGATTTATAAACATAACAGTTTTAATTCAGATACTTCCATGTTTCTAAATACAGATAGAATTACTTGCAATTACAACACTTATATTTCAAATACATTATAGCCCAATTAAAGTTATATAAAAGGACAGATGATGTATGCCCAAAAGATGAAGTTACAGTTAGCTTTGTTAGAATTTAATTTAGGATTTTTGTTTTGTTTTACAATTCACATGGAAAAATACAGACAGATCATTCTCAAGAATGCCTATACCCAAAGAACCTGAAAGAGATCTCTGTAGAAGGAAGCCAAAGGATAGGCTTATGTTTAAATAGCTAGATTCAGTCCTTCACTTCCATAAAGGAATGTTAAAATACTAACCTATGATACTATATATCGGAGAGAAAACAGCATGGTCTTTGAAAATATTTATGAGAATATAACTTGTGGCAATTCATTTCTGTTTATTTGATGCCATAATTATGAATGATTTTTAAACACTGAAAATCTGAATTATATATACAGGTATTTTGTGTATATACGGTTCTGCTGAATTTATGCAAGGATGTAGTTTTGTACTGAAAGAATAACTACCAACTCTCATTTTAGGTGGCATTTCTTTGTAGACATGTTTGCACAATACAGAGTTATAATATATCAGTAAGATGTTTTAATGCCTTTTGAAATAATAAAGAAATCACCCATAAAGGACAAAAGCAGGCACATGACTGCTTTGACATAGAGTTAAGAAGAGATGCCATCATCACAGTTATCCAAGTAATCTACAATGTATTTAACCAAGTATAGATAGATCTTTAATTATTTTAATATCTAGCCCAGCATTTTCAGGACTCAGTTATTTAGAATCATTTATTTGGGATGTGCAGTGATTCTTTTTGAGGTAAGTAGGGGAAGTTAGGAAGATATTTGTCAAGTATTTGAAAACTAAATTTTCAAAAAACTTTGAACTAGAATATTTTAAGTGACTACATTACAGTTTTAGTATGAGCCTACCCTTGGGAAAAAGTAATGTGATACTAAATTAGAAAAAAAAAAATGTGACACTAATATGGTAGTGTGCCATGGAGACTAGATACTAAAAGGTCCAGTAATTATAAGCATAAAAGAAGTGAACTCTGTTTAAAATTTTTCAGCATATGTGTGTGTCTCTACACATACATATATATAGTTGTTTAGAAGTGGAACATGGTATGAAAACTCTATTGATTTGTCTGTGTAATAAATGGTGTGTTTTGAAACTTA EMBV3_31409 ACTATAACCAAGAGTGGACGTTGTGGGATCGCTTTGAGGTACAGGGTTTGCAGCCTAACG Gene GeneID:282869|UBA1:NM_001102477:5_cdna Constitutive 0 NULL GeneID:282869 X GENE UBA1 MGC143315 UBE1 UBE1X ubiquitin-like modifier activating enzyme 1 EMBV3_27563 TGTGCAGGGCTTTTCCTTTCTTAATCGATACCTCAGTTTACGTGGGCCTTGCCAGGAGAC Gene GeneID:522473|GTF3C3:XM_002685471:163_cdna Constitutive 0 NULL GeneID:522473 2 GENE GTF3C3 NULL general transcription factor IIIC, polypeptide 3, 102kDa EMBV3_43189 TATCCACTGTGTGCCCAGAGGTCATACAAGACTCCTCGAGGCACTATCCATAAGAACAGC Gene BVT0101_012643 + 0 NULL GK000015.2:6731236-6750241 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060514 TCONS_00060513 TCONS_00060516 TCONS_00060512 TCONS_00060515 TCONS_00060517 1 XLOC_036759 Coding TCONS_00060513 XLOC_036759 Coding Coding LOC100336629 15:6744469-6884557 j TSS45239 7745 1 TCONS_00060513_2 312 0.0768237572627502 7 0.944762897342366 0.00164315723476036 0.00189076921466846 0.0010940806943702 0.000795314781885539 0.000953259624730018 0.000460114241221866 0.00120220216440215 0.00102787749174326 0.00173261293534537 0.000372701042480261 5.28436788169772e-05 1.01964673940044e-07 2.24592311098843e-08 1.43337030544324e-05 0.000409596243012484 0.00371245217743791 0.00487228734469841 0.000100862622546478 0.000691703828142513 0.00112918597706207 0.000629719197484659 0.00144223093539157 0.00123427545241495 0.00217763241356955 0.00145391213561635 0.0010672856830826 0.000548243519085458 0.000168313060867291 0.000245464979050472 0.000482489157873587 XM_005215748.1 YAP1 PREDICTED: Bos taurus Yes-associated protein 1 (YAP1), transcript 0.0 8260 100.00 0.591220142027114 XM_005271383.1 YAP1 PREDICTED: Homo sapiens Yes-associated protein 1 (YAP1), transcript 0.0 2955 87.43 0.312330535829567 TCONS_00060513_2 sp|P46937|YAP1_HUMAN YAP1_HUMAN Yorkie homolog; 0.0 585 93.60 0.996794871794872 1 coding 0 0 0 0 0.197041770332373 0.24097110217867 0.0375734224050059 0.493932861163604 TTCCCGATAGGCCAGTACCGATGCAGGCACCGCCGGGGCGCTGACTCCGCAGCACGTGCGGGCTCACTCGTCCCCCGCGTCCCTGCAGCTGGGAGCCGTGTCTCCGGGGACGCTGACCCCCACGGGAGTGGTCTCCGGCCCGGCAGCCGCGCCGGCTGCTCAGCACCTTCGACAGTCTTCCTTTGAGATCCCTGACGATGTGCCTCTGCCAGCCGGCTGGGAGATGGCGAAGACATCTTCTGGTCAGAGGTACTTCTTAAATCACATAGATCAGACAACAACCTGGCAGGACCCCAGGAAGGCCATGCTCTCCCAGATGAACGTCACCGCCCCGACCAGCCCACCGGTGCAGCAGAACATGATGAATTCGGCCTCGGGTCCTCTTCCTGACGGATGGGAACAAGCCATGACTCAGGATGGAGAAATATACTATATAAACCACAAGAACAAGACCACCTCTTGGCTAGACCCCAGGCTTGACCCTCGTTTTGGTAAAGCCATGAACCAGAGAATCAGTCAAAGTGCTCCAGTGAAACAGCCCCCGCCGCTGGCCCCCCAGAGCCCACAGGGAGGAGTCCTGGGCGGTGGCAGTTCCAACCAGCAGCAACAGATGCGGCTGCAGCAGTTGCAGATGGAGAAAGAAAGACTGCGACTGAAGCAGCAAGAACTGCTTCGGCAGGAATTAGCTCTCCGTAGCCAGTTACCAACACTGGAGCAGGATGGTGGGACTCAAAATCCAGTATCTTCTCCTGGGATGTCTCAGGAATTGAGAACCATGACGACCAATAGCTCAGATCCCTTTCTTAACAGTGGCACCTATCACTCTCGCGACGAGAGCACAGACAGCGGACTCAGCATGAGCAGCTACAGCGTCCCTCGGACCCCTGACGACTTCCTGAACAGTGTTGATGAGATGGATACAGGTGACACTATCAACCAAAGCACCCTGCCCTCCCAGCAGAACCGTTTCCCAGACTATCTTGAAGCCATTCCTGGGACAAACGTGGACCTCGGAACCCTGGAGGGAGATGGGATGAACATAGAAGGGGAGGAGCTGATGCCGAGCCTGCAAGAAGCCTTGAGCTCCGACATCCTCAACGACATGGAGTCTGTTTTGGCCGCCACCAAGCTAGATAAAGAAAGCTTTCTTACATGGTTATAGAGCCCTCAGGTAGACTGAATTCTAAATCTGTGAAGGATCTAAGGAGATAAGACCTATACCTGAAATTTCCAGTTAAGCCAGGGGCAGTCTTCTGGCTAATACAGAAAAAGATGAACAAACGTCCAGCAGGATTCTTTCATCCACTATTTTGCTCTTCCTTGTCCATTGCTGCTGTTAATATATTGCTGACCTCTTCCATAGTTGGCTCTAAGGAATCAAAAAAAAAACTTTTTTGTTTCTTTTGCTATTATAACTACTGTTTGTTTTGGGGGCTGGGGGAAGTGAGCCTGTTTGGATGATGGATGCCATTCCTTTTGCCCAGTTAGATGTTCACCAATCATTTTAACTAAATACTCAGACTTGGAAGTCAAATGCTTCATGTCACGGCATTTAGTTTGTTCAAGCAATTGTTCTTCAGCTGCCTTTGGCCAGTGGAAAAACATGACTTACTGGTCTAACAAGCCAAAAATGTTGTATCTGATGTTTAGTACTTAGACTGATTTGAAGAGCTAGCTGAAACCAAGGCTGAAGACTGTTTTACTTTCAGTGGGTTTTTTTCCTCCTAGTGCTATCATTAGTCACATAGTGACCTTGATTTTATTTTAGGAGCTTATAAGGCTTGAGATAATTTCCATAGAAATATATTAATTATTGCCACATACTCTAGTATAGATTTTGGTGGGTTTTATTGTGGGTTTTTTTTGTTTGTTTGTTTTCTTTTTTTTTTTTTTTTTGGTCTTCATTGGGATTTTTATTGTCTTAGGGGTTTTTCTTTTTTTTTTCTTTTTTCCTCAGAATCTAAGGCAAATTACCATTGTAGTGCATCTGTTTATACTTGTAGCTTGGGACAGTTATTATAGTTCCTTTGGTAAATCTACATGTCCTGGTTTTTTTTACCATCTTATTTAAATCTTGGTAATCAGCTCTCTTTATATATACCCACACACACACTTATAATGTTTATAATAGTGTGATAGCAGAATGTATCTTTTTTTTTTTGAGTTTTCCCTACTTTCCAATTTATTTTAAAATGGTAGCTATGAATGTATGCATTTAGAATACAAGACTAGTAGTTTATATTTCACAAGTAGTCTAAATCCGGTTGGGGTAGTGTGCAGGTGGTGGTGGTTTAGTGTTCTAGAAAGGGCTGTTCTTATGGATAGTGCCTCGAGGAGTCTTGTATGACCTCTGGGCACACAGTGGATATTATCTGCTGAAATTTGAAAGAAGTAAACAAGAAATGGCTTTATTATCCCCTTTAGCTTTGGAAGATTACCTTCGCCTTAGTTTTGGAAGTAAAATCTAGTAGTTTAGTTCTCTTTTATAATGAACACATTAAAGACTACATTGAAATATTGCCTACAAAATTGTTTTTACTTATAAGACTTGCTCCTACTTTTATATGCTGAGAATTTACCCTGGATAGTATATGGGATACTGTAAGGTCATAAGTTAGCTGGTAAAGTGATCAGATTAATGTATATTACTAGTTGATTTTAGCAAAGAAATAGAGGTAATCATGATTATACTTTTATTTTTACTGGAAGAGATATAACTAGAGTATGTGTCTACAGGAATAATAATGTTTTCCAAAGAGTATTTTTAAAGGAACAAAATGAGCATGAATCAACCCTTCAATATAAGCTATGAAGTAATACTTGCTTGTGAATTATAGTGGCATCAGCTAGCAGCACCTCTACGATTAAGGGTCTTTCAGTGTTTATAGAGTAAGCCCTTATTTTCAAGGGTTTATAAGACATGAAATCTCTCCTTTTCCTGGCTAAAACTGCTATGAAAAGCCTCAACTTTGGAAAATAGGTGGGGTTTTTTTTCTGATTACAAAATATAAGTATTTTGACCCTTCAGTTTAGAGGATTGCAAAAGTTGGAAGTAAAGTTTTATATTAGGTAATTTCAGTGCTCAAAATGCAGTCGTTGTGTTATATATATTGATTCATAGGTCGATCATTCGTAATAATTGACTCTAAGGCTATTATTAAAACAGCAGAAAGATTAAATCTTGAATTATGTCTGGGGGGAAATGGCCACTGTGCAGATAGATGTATTGATTTTTTTTTTTTTTTAGAGGAATAATGAAATTCTGCCTAGAATGCATAATTGAGTTTATGGATGGATGATACAGCATGTTGGCTTCTTTATATGCAGAAGATCAAAGCTACTTAGAAGGAGTGCCTACAATTTGCCATTAGCCACAAATTAAGATCTCATCTTATATATCAGCAGAGTAGCTTTAGATTAGGGAAGAGGGTGGGAAAATGGGAGGGGGGCTGTGAAGATTTAGTGGGACCTTGATAGAGAACTTTATAAGCTTCTTTTTCTTCAATAAAAACTTGTCTTGCATATTGCTGTCATTAAAGGCAGTTGTTCCTAAAATTTCAATCACTTAAGTACACCCACAAAACAAAAATATGGAGTTCTTCATTCCCCGACAACTTGGATTTACCCAGTTATACCTCAGTGTTGTGGCAGCACCATGGTGTCTGAAGGACACGGTGCTTTGACCTAATCGTACCCGTTGTACTGACCTGAAGGAGACCTAATCCTTTCTCTTTATGAATTTGAATCACAGCCTTGATGTGGTCTTTCTTGTTTTTTGTCCTTGTTCCTAATGTAAAAGTGTTTAACTGCTTCCTGGTTGTATTGGGTGGCATTGGAATAAGATTTTAACTGGGTATTCTTGAATTGCTTTTACAATAAACCAATTTTATAATCTTTAAATTTATCAGCTTTTTACATTTGTGTTCTTTTTAGTTAGGGCTTATTAGATCTACTTATGGTTAATGGAGCATATTGATTTGTAGTTTCAGATTTTCCAGAGCACTATTTGTTATAATAACTATTTTCTAAACAACAGTGCTTTAAAAAAAATTAGAAAGTAACTTTTATACAAATGATGTTGCTGTTTTAAGTATTCATACTAAATAGATGCATTTTATATGGAACCTTGGCAGAAACACTAAAATTTTAAAAATAAAACTAATTGTGTAATTCATAATTTATACTAATCAGTGTTGAAACTCAAACAGTGCGAAAGTGGGAGGCAATATCCAGTGATTTACAGTTTCAGAACTTCTTCACACCTGAGAAGTGAATGCTCGGATCAGTTTTATCTTCCACAAGCACGTTTTTATAAGAATTGTGGGTGTGCCTATCTTAACAGTTGTTTTCTGTGTCTTGGCAAAATATTCTCCACATTTTAAATGTTTTATATTAGAGAATTCTTTAATGCACACTTGTCAAATATATATATATAGTACCAATGTTACCGTTATATTTTTTGTTTTAGATGTAAGAGCATGCTCATATGTTAGGTACTTACATAAATTGTTACATTATTTTTCTTATGTAATACCTTTTGTTTGTTTATATGGTTCAAATATATTCTTTCTTTAAACGCTTCTTTGTTGTTTTTAACAGTTAATGTATTTAAAACTTTTTTGGCTTCTTAATGGGTCTTCCAGTAGAACAAGTGCAAGTAATAAAAGGTGATTATAGTGGTAACTGGCAGACAGGTTAAACTTAGGGTCGGTTTGGCACTGGGAACTTTTGTAGTGTGGATATAATTCCTTGAACTTTATGTTCTGTACTCTTCCTGTAAACCATCCTCATTGATAAAAGTGTATAAGCAGAACTGTATCCCCTTCAGTCTTAAAAGATTTTACTACATGTGTTAATAGCACAGAAGAAAATAGTGTTTCTTTCAAAATAGCCTTTGGTTTTATATCTCCAAAATAGAATACTTAATGTGCTATGCTAAGTCACTTCAGTCTTATCGAGCTCTTTGCAACCCTGTGGACCATAGCCCACCAGGCTCCTCTGTCCGTGGGAATCTCCAGGCAAGAATACTAGAGTGGATTGCTGTGCCCTCCTTCAGGGGATCTTTGCAACCCAGGGATCAAACCCACAATTCTTGTTTCCTGCATTGGTAGGTGGGTTCTTCATCACTAGCACTACCTGGGAAGCCCTATAATACTTAGGAAAATTATTAGATATTATTTTATAAATTAAAACACTCACAGATTTAAGTGGTAGGCTCTGAACTTTGAAGAAGTAGATTTGATTGTCTTTGAAAATCGTTTATTTCTGTGTGTATATAATATCTTTAATTATTGACATGTTTTTGGTGAGGCAAGTCTGAAAACAGTGTTTTATTATGTATAATTTCTTTATGATAGTAAAACATTTTGTGGAACTTGAAATTGATTGTTCCCCTTCCGTAAAATGCACAACCACTACTGGTTGTGCATTTTAACACAAATGTTAAATGTGCAAATGTGTGTCTATAGACATTGCCTCTCTTACTAGGGAGCTGCTCTTAGAGACGGTACGCTTTACACTGGATGGCTTGCAGTCCTTCTGGAGTCTGTGAACCAGAATTGTAAAGGACTAGTAATGGGAAGTGGTGAGCAGCCCAGCGAGTTAGCCCTTGATTTCCATCCTGTGGGCAGAGGTTGTAAAGGAAGAGCAGCGTCAAGGACCCCGTCACGTTCTTTCCTTCTGTAATGACAGCTCGGCCGTCCCTAGTCCTGGCGGCCATCACTTAGACTGAAAATCTGGCTTTACTTGGTATTCAGTGTAAATCCATGTACTGCTCTCTTGGGCTCCAGGGTTGCATGCACACTGCTGCTTCTGGAATCAGCCTTATCTCTGGCAGGGCGACTTGTCCCTGTCCTGCTTTAAACTGTTGCCATTTAATTTCTTTATTTAAATAGTCCTGAAAACTTTCATAAACAATCCTCTCCAATTAAAAATTTGCTGAGTTAATACCAGATGAGAATTCTGTGACTTTTAGTGCTGCAATTTTTCTAAATCAAACATGGAATGTTTTTTGCCATATCATCTGGATACAAAAAGCTCTGATACAAGTGAAATTAATAATTTTCGAACTATAAACGTAGCTTTAAACTGGCGAATGTAATAGTACCACAAATGAAAACAGTTGTAGAATCAAGGCACTAGCAAAATAAGATAATGTTTAAAAGATACTCTGAATTTTTTAATCTGTCATATTTTAACCACAAACAAAACTCCTGAATCAGGTGACTTGACATCTAAACTGAGAGGACTCTGTTAGCAGTTGAAAACTGAATGAGACAAAACTGGGTCTGTGTGTTGCTAATTGGAGATATCTGAGTGAAGAGCCTATTTCTGTAAAATTCCTAAACAGCTAATCTGGCACTTGGATTTCTTTTTTTTTTTAAGTGAAAATATTAAATACTAGAATTACTATAACTTTGTGAAGTTGATACTGGTTTGTATTGCAAAGTCAGTGAATGGAGAATTTCTTGTTCAGTCACTCAGTCGTGTCCGACTCTTTGCCACCCCACGGACTACAGCATGCAGGACAGTGCTTGATTCTTACTAAAAGAAACTTCTCCAAAAAACAAACCAAAAAAAGCATCTAAATCAGGAGGGTATCCTATTAGCATGACTTAAATTATTTCTTAGGCTTAGGACACAATTTTACCCATGTTGCCTTATGTCTCAAGTCTCTTCTGAGACTATAGTCCCTATGACCTTCACATAGGACTTCACATGTGGACGTCACAGAGTCCATACAAAGTAGTCTATGAGTTAAACATCACCTTTTGGGTATAATTTTTATTGTAACATTCTAGAAGTCACATCTCAGTTCCATTTAAGGATATATTTGTGAGTTACCAATCAAGTTCTTATGTATAGTGGATTTACCCAGTGTTAAAATGATGGTATATTAGAAATGATGGCCAATTAGAAGAGAAATTCATTTTCTTTAAGTTGTAGATCAAGTGGCAGAACTTGAGGCAAAAGCACTGTTGAATGAGTGCTGTCTCCCTGAACTACTGAAGCCAACAGTGATAAATGGACTAGGAAATTGAAGATCATTTCTCCTTAATTGAGCTTTATAGCAACTTGTATTTATCTACAGCTGTGGTTCAACAGAGGCATCTCATTGGCTCAGTGATGAGGATCCGAATAATGGTCAGAATATCACAGCTGTATGAGATTCCAATCACTGGGGTGACCATGAATTAGGACTTAGATTTTATGAAAGATACGAAGAGTCTCATTCATGAAGCGTCAGGCTGCTGAGTAACTTGAAGTCACACTGCAAAGCTAGTTGTGCAGTACCTACTGAAGAAGGCCATTTGCTGAAGTATTTTCTCCAGACATTAAGAAGTCTCTTGAGCCCTATAAAATAACCTCAGTAAGACTGGCCAGAGTAGAATGTGGGCTTGAGATTTAGTTGTCTCTTAACAATCTAAATCTTAAATAGCATATGCCCATGTATTTTCCAGTCAAAAAATGGCTGATGCCTTACAGGAAATAACGTTATTTTCTAAACACCTCAGAACTACACACATCCCCCCTGTATTTTTTTAGCCGTGCCACAGGACACCTGGGATTTTAGTTCCCTGGCCAGGGATTGCACCCATGCCCCCAGCATTGGAAGCACAGTCTTAACCACTGGACTGCCAGAGAAGTCCCAAGACTCCCTCTGAGGGTGCATCATTGATCTAAAATGGAGCAGGAAGCCCTGGCTGAATCTGGAATGTTGTTCAGGGAATTTAACATTGATTAAC EMBV3_30631 AGAGGGCCATTCTCTCATCTGCCCAGACTACCTCCGCTACATCCGAAAGTATAACCGCTT Gene GeneID:509782|LOC509782:XM_002688266:2_cdna Constitutive 0 NULL GeneID:509782 6 GENE LOC509782 NULL similar to ribosomal protein S11 EMBV3_16569 GCGATGTGGCCGATCAGGAACAACTGAGAGGTTTCTGTGATCAGTGGAACCTACCTGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38678 GCCCCTCCTGAAGTTCCTGAGAGTGGAGATCTGGATGATGATTCTGAAGCTATCCTCGCT Gene GeneID:782609|LOC782609:XM_002707812:26_cdna Constitutive 0 NULL GeneID:782609 4 GENE LOC782609 NULL similar to Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (hNRP) EMBV3_43605 GAAATATGGTTTATGCCTATCTCCTGATGGCTGATCGCATTCCCAGTCTGAACTGTGTCA Gene BVT0102_211201 + 0 NULL GK000014.2:66453996-66472637 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30108 GAAAGAAGCCAACTACAAGGGTGCAGACAAATACTTCCATGCCCGCGGAAACTATGACGC Gene GeneID:618238|LOC618238:XM_002699089:76_cdna Constitutive 0 NULL GeneID:618238 29 GENE LOC618238 NULL similar to mammary serum amyloid A3.2 EMBV3_15210 CTCAGCACTACTTACCTAGTTGTTACAGCCAAAATATCAAGCCTGCTAGGCTCCTCTGTC Gene BVV0102_329441 + 1 EMBV3_17564 GK000014.2:57524005-57784158 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40458 TCTCCTGATTGCTCCTGTGTAAAGATGCCTTGTCGTGCAGAAACAAATGGCTGTCCAGTT Gene GeneID:508312|SFRS2:NM_001034318:362_cdna Constitutive 3 NULL GeneID:508312 19 GENE SFRS2 MGC127100 splicing factor, arginine/serine-rich 2 EMBV3_11946 AACGTGTTGCTAGTCGTGAGCGACTCCTTCCAATGTGGAGTGGGCTCTTCACTCACTTAA Variant GeneID:533618|ARSK:NM_001035400:11_cdna 154^283 1 EMBV3_09284 GeneID:533618 7 GENE ARSK DKFZp313G1735 MGC140691 arylsulfatase family, member K EMBV3_34552 ACAAAAACCTTGATGTTGGTAAGGATGTAGTGAGACCAGCCCTCTCTGCCACTGAAACTG Gene GeneID:506380|KLK7:NM_001075256:142_cdna Constitutive 1 NULL GeneID:506380 18 GENE KLK7 MGC151859 kallikrein-related peptidase 7 EMBV3_08219 AAATGACGGCCTGAAGATGCACATTCGTACTCACACCAGGGAGAAGCCATACAAGTGCTC Gene GeneID:537500|PRDM5:XM_002688026:8_cdna Constitutive 2 NULL GeneID:537500 6 GENE PRDM5 NULL PR domain containing 5 EMBV3_02605 AGTTTTTCCCACGTGCTGGCTAGGAATAGCTGCAGAAGGAATGGCATGCGGTGTGTTATG Gene GeneID:533785|BPGM:NM_001035402:23_cdna Constitutive 0 NULL GeneID:533785 4 GENE BPGM MGC127743 2,3-bisphosphoglycerate mutase EMBV3_38816 TGCTGGGACTACTGGCTGGTCACATCACCTCTCTGCCTCAGTTTCCCCATCTGTAAAATG Gene BVT0102_045853 + 0 NULL GK000028.2:26901858-26915937 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160441 1 XLOC_097657 Coding TCONS_00160441 XLOC_097657 Coding Coding LOC100336728 28:26914711-26924908 = TSS119982 2139 3 TCONS_00160441_2 207 0.0579710144927536 4 0.790604158493527 0 0.00038521440920436 0.000211989382485219 0.000182466155589087 0.000103867766080376 1.67230289440372e-06 1.3631830610866e-05 1.93562736989383e-05 3.68869552157141e-06 2.50062527006495e-05 2.24744618721032e-05 5.01498117763834e-06 0 1.09957689503082e-05 3.3755421028319e-05 0.00388950630516145 0.000543319460134658 0.00466344540354972 6.70493324061119e-05 0.000578273739383858 2.83845336957357e-06 0.00280312626177027 0.00156546452599069 0.00112861387472727 2.26738283356982e-05 0.000349144794587272 5.47839856947007e-06 0.000395163449138755 0.000161139246517961 0.000699883267142007 XM_002698907.3 LOC100336728 PREDICTED: Bos taurus paladin-like (LOC100336728), mRNA. 0.0 3562 100.00 0.922861150070126 NM_014431.2 PALD1 Homo sapiens phosphatase domain containing, paladin 1 (PALD1), 0.0 659 74.16 0.484338475923329 TCONS_00160441_1 sp|Q9ULE6|PALD_HUMAN PALD_HUMAN Paladin; 3e-48 169 67.69 0.789808917197452 0 coding 0 0 0 0 0.00599002710713351 0.963700450969588 0.0141707732024534 0.84269007505178 ATGTCACTGGTGCCCCCTGCAATCAAAGGAAGTCCCACATTCAATGATGCTGCTCTGGCCGTGGTTACCCCCTCCTCCATCAGTCCCACGTTCAATGATGCTGCTCTGGCCGTGGTTACCCCGTCCTCAACGCAGTTTCTGTTGGATGGCCGCGAGTCCCCTGTGGCGAAAGCGGCCAAGTCGGAGCAGGAGGCCCGGAGGCTGCGGCTGCGGAGCCTGCAGTACCTGGAGCGCTACATCTGCCTGGTGCTCTTCAGCGCCTACCTGCACCTGGAGAAGGCCGGCTCCTGGCAGAGGCCCTTCAGCGCCTGGATGCGGGAGGTGGCAGCCAAGGCCGGCATCTACGAGATCCTCAACCAGCTGGGCTTCCCCGAGCTCGAGAGCGTGGAGGACCAGCCCTTCTCGAGGCTGCGCTGCAGGTGGCAGGAGCAGAACCGTGGCCCTGAGCTCTCCGCATCAGGGGACTTCCTGTAGGAAGGGGGCTTCCTGTGGGATGCGCTGCCCCTGCTTCTGCTATCACCGCCTCCTGCAGGGCCACCTCCCTCCCCACATAGTCTGGGGGTACCCGATGCTCTTCGGTGGCAGTGGCCCTGAGAAACGACTCCTCGGCTTCCCAGAGACCCGGGTGGGTGGGGATCCCCTTTTTGAAAGAGTTGTTATAGCATAGGTGGCCACTGTGATGTCTCGTGAATGGCTGCTCCTGGAGGGCCTGCAGGAAGGCCCGGTGTGGCATCAGCTCTCCAAGGCACTCACTCCCCAAGTTGCCAAGCCAAACCTCTCACCACTTCCGTCCTCCCCTCTGCCCCGAGCAGTTCTGATGGCCCCTGGCCTAGAGCAGTCCTGGCCAGTGTTGGTTCCTTCTCTCACAGCTCTCCCACATGGCTTCTCCCCTTTTGCTGCCTGGGCGTTGCCCTGGTGGCCCTGGGCTCCCTGGGAGATGGACTTCGCTCTGGCTAGATTTGTTACCTTAAAGGCAGTTTTCTGCAGTGTTCTTGCCTCTCATTCCTTGTCTCAACCTCAAGACATGAAGAAAGACAACCACATTCCCTGTGTGTTCAGTGGAGGCCTCTGCCCCTCCTGCCTTTGCCCCCTCCCCTCCCCTGGGCTGGCAGGACTGTAGAGGTTTCCATGGAGCTGAAAACAAGAGGGAACCCCTCTTGGGGTTGGAGGGGGCAAGAAAGAGCTCCCAGAAGGTGCATGCCACCCTGTGGGAGAGGCCTGCTCCATTTCCCTGGAAGCATGGTGGGGAGGTTTGGGGAAGCACCTCCTCTCTGCTCTGCCTGGCCCCCCAACAGTGGTCTGAGCCCCCACCTGGTGTGGCAGGAGCTGTGGGGACTCCTGGGTGACCCTGAGTGAGCAGTGGGGTGTGTGAGAGTGGGCCAGGGATGGCACGAGGGGGCACTTGGATTGCAGGCCATCCTTGCTGAGCACCCTCGAGTTGCCTTGTGATGGGAGCAGAAGAGGCCAAGGCCTGCCGAGTTGGCAGCTGCTGGGACCAACTGTGTGGATGGTGGGAAGGTTGCTCGGAGACGCAGGCAGGTGTTGAGCTGAGCCTGTGGCGCTCCCTCTGGGGACTGGTCTCCCCCTAAAATGCAGGGGCTGAATGGTATGGACTCTGTCCCCCTGGCCTGGCTCCTTGGGGCCAGGCAGGCCTCTTTTGGTTGGACACCAGCACTTGGGCAGAAAAACAGATGATGTATCACTGGTCGTGGTATTTTGAAGAGGCAGATGAGGCCAAAGTTGTTCACGTCTACCTAGTATTGGAAAATATATGACCATTTTGGCTGAATTCTTTTGCAAATCTACTGTAAGTCTTTTCACTACCTTTTTAGATTTGTTGTTTTTGGTTTTATTTTTGCATGTAGTAAAAAGTGTTAATTTCTCTGCAGACAAGGTCTAGATGAGGGGTCAGAGATCAGGGCTGAACTGGGAGGGATCCTTTGCGTTCTCATGGTTGGCCCTGACTTTCAGCTGTGCTGGGACTACTGGCTGGTCACATCACCTCTCTGCCTCAGTTTCCCCATCTGTAAAATGGGAGAATAATACTTGCCTACCTACCTCACAGGGGTGTTGTGAGGATTCATTTGTGATTTTTTTTTTTAACAGATCTTTTGAGCATTAAAAATGGCTAAATGTGAA EMBV3_07496 ACAGAATATGCCCATTTATTATTGCAGTATGCCAGTTTATTATTTTTGGGTACAGCATTC Gene GeneID:511090|SUCLA2:NM_001075493:91_cdna Constitutive 1 NULL GeneID:511090 12 GENE SUCLA2 MGC140636 succinate-CoA ligase, ADP-forming, beta subunit EMBV3_02821 CCATGGTGGTCCTGGGCCTTGGCACCTTTGTCCTAGTGCTGGTTTCTTACAGTCATATCA Gene GeneID:526630|LOC526630:XM_002687327:150_cdna Constitutive 0 NULL GeneID:526630 5 GENE LOC526630 NULL similar to hCG2044647 EMBV3_28750 AGATAAAAAATAAAGAGGCAAGGGTCTACTGTCATTTGTATACAATTCCTGTTACCTTGG Gene GeneID:508722|RBM39:XM_002692451:478_cdna Constitutive 4 NULL GeneID:508722 13 GENE RBM39 NULL RNA binding motif protein 39 EMBV3_16164 CCCTTTTTGATAATTGGGGGAAGTGAAACCCTGAGAGGTGAAGGGTCTTGCCTAGCTAAG Gene BVV0102_239675 + 1 EMBV3_31931 GK000019.2:55981658-56015759 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00920 CTGTCCTAGCTGGTCATCTTAGCCACACAACCAGTGTGCCCCTTCTACCAAAGGCTACTT Gene GeneID:530047|RPS6KL1:NM_001037472:145_cdna Constitutive 0 NULL GeneID:530047 10 GENE RPS6KL1 MGC128730 ribosomal protein S6 kinase-like 1 EMBV3_06560 TCAGTGCTTCCCATGTGCCAGAGGAACTTAAACAACCGTTACACAGAAAGTCCAAGTCAC Gene GeneID:532209|MECOM:XM_002684943:186_cdna UTR3_Alt 2 NULL GeneID:532209 1 GENE MECOM EVI1 MDS1 and EVI1 complex locus EMBV3_10577 TTGTAATTTTGAGGGTCTAACCTCTACTCTAGAGTTTTAATCTTTGCTTTTGGGTATTTG Gene BVV0102_309278 + 0 NULL GK000030.2:38685710-38708010 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17608 AGATGTGCCCCCATGTCAACCTTGGGCCCACTGCCCTGCTCTCCCCACCTTGCTCCTTCT Gene BVV0102_296369 + 0 NULL GK000023.2:17980322-18223166 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02118 CCATCCGTGGGGCCATCATCCTGGCTAAGTTGCCCCCAGAGGCACTGGCATCGTCTCCGC Variant GeneID:286867|RPS2:NM_001033613:42_cdna 504^615 2 EMBV3_06168 GeneID:286867 25 GENE RPS2 MGC126925 RPS2E ribosomal protein S2 EMBV3_15526 GAGGTTCAGGTCAGAGGTAGCAGGGAAAAGGAAGCTAAGTCTACGAGACCGTGAATGTTC Gene BVV0102_333048 - 1 EMBV3_31812 GK000022.2:55073013-55497669 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22017 TCCACCTTTGCCTTGAGACAGGAGTGACAAACTACCCTTCCACCAAATCTAGCCTGCAAC Gene GeneID:616537|RAB6A:XM_002693454:33_cdna UTR3_Alt 2 NULL GeneID:616537 15 GENE RAB6A NULL RAB6A, member RAS oncogene family EMBV3_42564 AAGAAAACTTCATTATAAAGAATTTCGAAGAACATTAGTTTGGAAGAGTTCAAGTCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27246 CGTGGGCCTGTTAAAGTGGATCAGTAGAAAAACAGGTGAATGTAATCCTTCTTGGGGCCC Gene BVT0102_067199 + 0 NULL GK000002.2:111492916-111504464 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103400 TCONS_00103403 TCONS_00103406 TCONS_00103399 TCONS_00103405 TCONS_00103404 TCONS_00103402 TCONS_00103401 TCONS_00103407 TCONS_00103408 1 XLOC_062104 Coding TCONS_00103408 XLOC_062104 Coding Coding LOC100337041 2:111478128-111495745 j TSS76790 3487 1 TCONS_00103408_1 119 2 0.802168483197094 7.36856437248885e-16 0.00103941420297001 5.90682397034555e-13 3.03803439290189e-24 1.52198265160744e-11 1.64682871411189e-54 0.000905574753809832 8.06393142316254e-44 5.80703048972995e-16 2.42505981271887e-72 0.000611719079479153 0.000289784370446112 3.99113528956901e-118 0.00276400094052087 0.000652169915557297 0.00167944489251518 0.000202495084631178 8.94134189267201e-24 0.00600959099373502 4.74044560455775e-13 0.00190612793171868 0.00182550153507086 0.00484611129597135 0.00277147339394959 0.00180885643681249 0.00576726043811221 0.00259244363303623 0.000830092458712023 0.00024589077936898 0.00166799572657137 XM_003585772.2 SGPP2 PREDICTED: Bos taurus sphingosine-1-phosphate phosphatase 2 (SGPP2), mRNA. 0.0 6212 100.00 0.987381703470032 XM_005246297.1 SGPP2 PREDICTED: Homo sapiens sphingosine-1-phosphate phosphatase 2 (SGPP2), transcript variant X1, mRNA. 0.0 755 82.79 0.203039862345856 TCONS_00103408_1 sp|Q8IWX5|SGPP2_HUMAN SGPP2_HUMAN Sphingosine-1-phosphate phosphatase 2; 7e-71 221 92.37 0.983193277310924 0 coding 0 0 0 0 -0.0759603173012542 0.642473473210954 -0.0813378325761585 0.20047682656003 GTTCGGCTTGAGGAGTCCGTGTTGGCCTCTGGAATTTAGCAAGGATGTGCTGGGCGGCATCCTGATCACCGCCATCCTCATTGTCCTCACTTACCCTGCCTGGACCCTGATCGATCGCCTGGACTCGGCCAGCCCTCTCTTACCTGTGTGTGTTCTAGTGGTGCCATTCTTCCTGTGCTACAACTACCCCGTGTCTGATTACTACAGCCCAACCAGAGCAGACACCACGACCATCATGGCTGCTGGAGCTGGGGTGACCATAGGGTTCTGGATCAACCATTTTTTCCAGCTCGTGTCTGAGCCCATGGAATCTCTCCCTGTTATTCAGAACATCCCACCGCTCACCACCGACCTGTTAGTTTTGGGTCTGGCCAAATTCACTGTGGGAATTGTGCTGATCCTCCTGGTCCGTCAGCTTGTACAGAAGCTCTCGCTGCAAGTGTTGTACTCCTGGTTCAAGGTGGTCACTAGAAACAAGGAGGCCAGGCGGAGACTGGAGATCGAAGTGCCTTACAAGTTTGTTACCTACACGTCTGTTGGCATCTGTGCTATCACCTTCGTGCCAATGCTCCACAGGTTTCTGGGATTACTCTGAGCCTCAAACAGTCACTGGACAAGACATCAAAAAGTTGAGTGGGGAAGTCTTGATGACACATTTTTCTTTAAAAACAATTTCCTTAAGTCACATGTCTATTTTGCTAATATCTAAGATAAATGTTGCTGCTGTATGGTGGGGAAAGTTGTCTCATAGGAACCACTTGCCTGTAAGGGTCATGTCACGGATGAAGCCAGGCTAAACCCACAGTTAACCTCTTTCGGGGTCCCCCACCCTGTTACATGGACTTTGGGCCAGCCGTGGGCTGGCAGGAATTGCAGCCTGGCTTAGGAGTGGCCACAAACACCCTGGGTTCTGAAGAGCATGACCCAGAAAGCTGGACAACGGGTTTTCTTTTCAATTATGACCCTGCCCATCGCTCAGTCTCAGTGCTGCTCCGAGAGAAAAGATGATGTTCCTTGGACAGGGTGACTTTCTGTCGTTATGATCACATGAGACCATGCCAGCTCACAGGGAAAGAGTGCTGTAAACCTCCCCGGGAAGCGTGAAAGGCGAGGCAAAGCCCTGAGGTCCTAGGCAAGAACCTGCTTTCCCTGTGTGTCCTGGTCTCTGTCAGGTGCGCATTGGACAGGAGGGGATCTGCTCCTCCTTGCCTGTACACTTTGCAGGATTTGGATACCATTTATTTCTATCCTCTTCTGAACCATGAACCCAACTGGCTGCTCCCAACTCACTTCATCTGGGTTCCTCTGGGTATGCGGCTCTCTCCTGCATCAGAGTGACTTGGGACAAGCCCTCTGCCCTTCTTCATCTTTTTTTTGCTTTTTACAAACTGGGAAGGCACTGTCGTGGGCCTGTTAAAGTGGATCAGTAGAAAAACAGGTGAATGTAATCCTTCTTGGGGCCCTAGACCTCCGTCCTGGCCACTGTTTCTTCATTACTTTTTCTAAATCCATTTTCTCATCTGCTAAATAGAATCAGGGGCTCCCTTTCCATCTCCCACCCCCACCTCTTGTCTCTTGGCAATTTTAAGGGTAATTAATGTCAGAACAATGTCAGCCTCTCTTTGGAACAAGCCAACCCAACCCAGCATCCTTTAGACCCCAGGCAAGTCCTTATTAGACTTAGGAAGGTGATCATTATGCAAACACCTTCCTGCAGGGGCTCCTCTAGGAGGAGGAACAAGAATGAAGAGGAACAGCTGAACAGCTGTCAACGGTGTTCTTAAAAGCGAGTGTCAATGGGCAGTTAACAAAGTGTCTTATGGTGGAGCTCCTGAGCTGCTGAAGCCAATGCTTTATAACCTCCTGCGTCCTCACCACTCACATACTTTGAGGGGAAATCTGCCTGTCTGGACAGTTAGGTTCTTACCTCCGCATCCAGTGTGAAAACTGAACACCCGTTTGTCCTGATTTCAAAGACGCACCCTGGCCTTTTGGTTGCGATCATCTCTGATGTTTGCCTTCATGCTTCTGACATTTTTCATAGTTAGAAGGCAGGGGTCAAAATGACTTGCTGTTTGTGTTTTTACATCATCCTCTGACCAAGATCTGTGGCACTCTGGCAGGGGGATGCCCCAGGTCACGGGCACCCCCACCCGAGACCACCCCACACTGCAGTGCACGCGGCACTCTCTGTACCCCCGTCCCCGTGGGCTGCCAGACCTGAGATCATAGCCCTGGGTAATATTTACACAAAATGATTTTAGTTGATTTCTCTGAAGCTAACGGGCAAAAGGATCAGCTTTTTCCACTTGTATCCTTTGAGAAGGGTGCTAATTGTTGTCATAGCGGTGGGTGTGAACGATTCATTTGTGTGTGTATATAAATTTTACTGCCATCTCTTTAGTTTTAAGCCCCAAAAACAGAACCGCAGTCAACTGCATTGATGTATTCAAGGCTGTATTTATACAATTTGGATTGAGGATGAATATGGTAGCCATTGTGCAGTAAAGAAAGACTCACAGATTGGTCACTTTTTAAAGTCTCTTGTTACATCAACCAAAGAGTAAAAAGTACATATTGGTGAGGCCAAGCTTAGTTTTTGAGCACGACGGCTCTGTGGCCTAGAATGAGGCAGAAACTGTTTAGAAAAACCATTTTAACTGCTTCAAACTGCAGCTTGGTCAGCCCTCATTCACCTTACCCAGCCCTTCACCCTGTTATACACACACACACACACACACACACACACACACACACAGAGCCCTCCTCATTCACTTTACCCAGCCCTTCACACAAAGACACACAAAACACCCCTCATCCCACCCCCCAAGACTACACCTTCCATCTCTGACCTTTGGATTTTCTCTCTGGGGATAGACTGCCCCCTGCTGGCATAGCCCCTGTCTTGATCCAGAGCCTCTGTTGAGCAGAAGTCTTAGAGATTAAGTTTTAAAATCCAGCTCATCTTGATGTGTCCAGTCTAAGCGTAGAAGATGTAGTCTGGCCAGCCCTGCATTTGAACGTGGTGACACCAAAGTGCTTGGCGTTATCAGCCCCTCCAGGCAGAACAGCACGTGCTCTTCCTGACTGCCCTCCTGCCCCCAGCCCACAAGCACAATGGACCAGGCATTTCCTCCTGTGAGTGTCATGCTAAACAGCCATCATTCCAGGCCAGTTTTGCCTGGACCCCCACCAAAACAGATGATGCGGGAGAAAAAACCACAGAGGAGACCATGAACAAAAAACCCTCAAGGACTGAAATCACCCCTCAAGGTGCCTGCAGATCACACTATAACAGAATTTTCTTGCCCAAATAGGCGACTCATGCTTCCCGAGTGTAACCAAAGCATGTGGTGTTTCAGGGCCATATGCTCTGGTTTTCTATTTTGGAAACCTTCAGCTATCTTACTTATGTACTGTATGTAAATTTATTCTTTTTAAAATCATTTTTGTTTGATTATGATTTATTAAATGCTTTAAAAGCCAG EMBV3_36978 GTACAGGCACAAGCAGAGGGTCCAAAACTTTCATAGGATCAGTGTGTCCTCCATATCCTC Gene GeneID:100141220|BOSTAUV1R410:XM_002695266:278_cdna Constitutive 0 NULL GeneID:100141220 18 GENE BOSTAUV1R410 NULL vomeronasal 1 receptor bosTauV1R410 EMBV3_04687 GAAGCCGGTGCAGGTGCCCTGCGGACACGTTTCTTCCTGTCCAAGATCCGGGCACATGTG Variant GeneID:513479|RNF114:NM_001024531:1027_cdna 176^326 3 EMBV3_18053 GeneID:513479 13 GENE RNF114 Znf313 ring finger protein 114 EMBV3_11776 TATGTCACCTGGATTGCCCTGATGGTGTTTGTGGCTCCTGCCCTGGGTATTGCTGCCTGT Gene GeneID:281642|AVPR2:NM_174246:13_cdna Constitutive 0 NULL GeneID:281642 X GENE AVPR2 NULL arginine vasopressin receptor 2 EMBV3_42764 GAGTCAGAGCTGTACCAGAAGGAGGTGTCCCACCTGAGTGCCCTGGAGGAGCGATTCTCA Gene GeneID:100336667|LOC100336667:XM_002695213:931_cdna Constitutive 1 NULL GeneID:100336667 18 GENE LOC100336667 NULL DNA polymerase delta catalytic subunit-like EMBV3_29004 GATGGCCATGGGTGAACCAAGGTTGAACTGACGTATAGGAGAAAATTTGAATGCCTCAGC Variant GeneID:541255|NARG2:NM_001076265:118_cdna 282^386 2 EMBV3_10706 GeneID:541255 10 GENE NARG2 MGC140685 NMDA receptor regulated 2 EMBV3_36662 GCCCGGCCTTTCTTTACAATCCGCTCAACAAACAGATAGACTGGGAGAGGCATGTCGTCA Gene GeneID:509947|C1orf52:NM_001037592:32_cdna Constitutive 0 NULL GeneID:509947 3 GENE C1orf52 MGC133744 chromosome 1 open reading frame 52 ortholog EMBV3_10669 ACCGGTTGTGCGTGCTGCATGAGAAGACACCAGTGAGTGAAAAAGTCACCAAGTGCTGCA Gene GeneID:280717|ALB:NM_180992:2_cdna Constitutive 0 NULL GeneID:280717 6 GENE ALB MGC179277 albumin EMBV3_12171 CACAGGACATGGCTCAGAATGTTATCTATAGCCCTTGAGAAAGAACTGGAGGTCCTTGAA Gene BVV0102_019832 + 0 NULL GK000018.2:65851517-65866381 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092002 TCONS_00038658 2 XLOC_056770 XLOC_022481 NonCoding TCONS_00092002 XLOC_056770 NonCoding NonCoding - 18:65855975-65856469 - TSS69348 494 1 TCONS_00092002_1 39 0.92914979757085 1 0 0 0 0 0 0 0 0 0 3.19439308421864e-05 2.49868039639817e-05 0 0 6.96993076156048e-05 5.71335278685744e-05 0 0 0 0 0 0.00273682128907574 0 0 0 0 0 0 0 0 9.82713675522394e-06 0 XR_228539.1 LOC101904248 PREDICTED: Bos taurus uncharacterized LOC101904248 (LOC101904248), 2e-70 269 79.20 0.639676113360324 0 noncoding 0 0 0 0 -0.263286152757161 0.181526690309773 0.0055369430634391 0.908124947401897 GCAGAGCAGGACCTTGCTCCCAGACCTTGTTCTCTGCCTGCCCTTTGCCTGTGGATAAGTCTAGTCCAAGAAGAAGTTTAATCAGGGAAGTGAGAAACTAAGGAAAACAGTCTAAGGAGACTAAATAATGATGATGTAGTCATTAGGTGTATTCAAGGACCTCCAGTTCTTTCTCAAGGGCTATAGATAACATTCTGAGCCATGTCCTGTGAGCTGTCTTACAGATACCAAAACACCAGCTGGAGAAGTTGGTCACCAGGTACATGATGACCAGGCTGTACCCAGGATTTGAGCTGCCACAATTCTGAGAATTGATCGCAAAGAATTGGGAACAGTTGCACCCGAGACTGAACAACTGTATTTAAAACAACCAAGATGATGCCGGTCAGACCACTGATGACCAATTTGAAGTGCACTGTTAGAGATGACGGTGCTGTTTCTGCATGTTGTCCCCCCACCCCAACTTTGTCTATAAAAGCTCTCACTGCCTGCTT TCONS_00085090 . 3' 4457 TCONS_00085090 . 3' 4950 EMBV3_04680 GAATTTTAACCCATTACCAGACTACTGGCTCTCTCTCCTTTACAAGCGCCTGATCGGCCC Gene GeneID:537343|HPSE2:XM_002698419:370_cdna Constitutive 0 NULL GeneID:537343 26 GENE HPSE2 NULL heparanase 2 EMBV3_41450 CACCAAACTGCTGTTAAATCATGCTTCGGACAGTCGTGTGCAGCTGAGTGTTCAGTGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36175 TTCCTGTTTCAGCCCCAGAGGTTTGGCAGAAACACCCGGGGCTCCTGGAGCAACAAAAGA Gene GeneID:281354|NPFF:NM_174123:6_cdna Constitutive 0 NULL GeneID:281354 5 GENE NPFF NULL neuropeptide FF-amide peptide precursor EMBV3_04807 GGGTTCACAGTGCCCACAATGCCAGTGGTTACTTCACTATTTATGGAGATGAATCCCTCC Gene GeneID:535136|DIP2C:XM_002692197:100_cdna Constitutive 0 NULL GeneID:535136 13 GENE DIP2C NULL DIP2 disco-interacting protein 2 homolog C (Drosophila) EMBV3_36988 AGCAGTGGTGGCATTATTACCTGGACTTGGTCAAAAAGATGCAAATTCTCAGCCCCACCC Gene BVT0102_118170 + 0 NULL GK000030.2:126052642-126146066 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248248 TCONS_00248247 TCONS_00248251 TCONS_00248246 TCONS_00248252 TCONS_00248250 TCONS_00248253 TCONS_00248249 TCONS_00248244 TCONS_00248245 1 XLOC_151550 Coding TCONS_00248246 XLOC_151550 Coding Coding ZFX X:126144027-126183808 j TSS185716 7805 1 TCONS_00248246_5 774 0.0567584881486227 9 0.804022121669181 0.000389724545602782 0.000323573648356786 0.000577586782626121 1.93753978282917e-19 3.07482547150487e-05 4.65860692123763e-112 2.95888779032581e-05 0.000111424317908575 0.000345517473075635 9.2064468952653e-21 7.47086202804141e-09 1.55210130101102e-25 2.25204007190861e-24 2.08574793035294e-94 0.000244887758185421 6.06066085909502e-07 0.000615980947497644 0.000118961705296859 0.000324447050014774 2.4798500110995e-05 0.000200848057144923 7.44586992907824e-06 0.000126794632348835 3.0222895065787e-10 0.000279128269784635 0.000334564275814075 0.000113927063777692 4.12856879721045e-05 8.93705758498912e-11 3.24527612252866e-20 XM_005228348.1 ZFX PREDICTED: Bos taurus zinc finger protein, X-linked (ZFX), 0.0 1.272e+04 100.00 0.903779628443306 XM_005274591.1 ZFX PREDICTED: Homo sapiens zinc finger protein, X-linked (ZFX), 0.0 5447 89.64 0.515438821268418 TCONS_00248246_5 sp|O62836|ZFX_BOVIN ZFX_BOVIN Zinc finger X-chromosomal protein; 0.0 1598 100.00 0.998708010335917 6 coding 0 0 0 0 0.201707442412401 0.351135541875576 -0.0133400749246693 0.769299253248375 CCGCCATGATGGGCGCTCGGGCTCCAGGCGCTCGGCGGCAGCGCCACCTTCCTGCCCTGCCTCCCGCAGCCCCGTGACTGGCTCCTGCTTCCGCTGTATTTTAACTGAGCTGCCGCAGGCGGCCATAGCTGGCGCCCGGGTGCCGGTGCCATCTCGTCCCTCAGGTCCCTTCCCCCGCGCTGGTAGTCATTTGAGGGTCGTCCGGACGGATGGCCGCCGAGGCATGTGGACTCATCACGCAAAAGAGACCCCAAGACATTTTTTAATTTTTACCACATCGAAGTCACACGTGACTGTTAGGGTGCCCTAGATGCAGTTGTTTTCCAACAATCACCGTCTTCTCGAGTAAAAAAATTAAGGAGTAAAAAAAAAAAATTGATAGGAGCTGTGACTGATGAAAATTAAAGGCCATGGATGAAGATGGACTTGAATTACAACCACAAGAACCAAACTCATTTTTTGATACAACAGTTTTTCAGAACACTTCCCATATATTCCCATTTGATCATCACAACAGTCCTGTGAGGAGCTGATGCTACACACATGGATGGTGATCAAATTGTTGTGGAAGTACAAGAAACTGTTTTTGTTTCAGATGTTGTGGATTCAGACATAACTGTGCATAACTTTGTTCCCGATGACCCAGACTCAGTTGTAATCCAAGATGTTATCGAGGACGTTGTTATAGAAGATGTTCAGTGTCCAGATATCATGGAAGAAGCAGATGTATCTGAAACAGTCATCATTCCTGAGCAAGTGCTGGACTCAGATGTAACAGAAGAAGTGTCTTTAGCACATTGTACAGTCCCAGATGACGTCTTAGCTTCTGATATTACTTCAGCCTCAATGTCTATGCCAGAACACGTCTTGACGAGTGAGTCCATACACGTGTCTGACATTGGACACGTTGAACACGTTGTTCATGATAGCGTAGTAGAGGCAGAAATCGTCACTGATCCTCTGACAGCCGATGTAGTGTCAGAAGAAGTATTGGTAGCAGATTGTGCCTCAGAAGCAGTCATAGATGCCAACGGGATCCCTGTGGACCAGCAGGAGGATGACAAAGGCAACTGTGAGGACTACCTTATGATTTCCTTGGATGATGCTGGCAAAATAGAACACGATGGTTCCTCTGGAATGACCATGGATGCAGAGTCAGAGATCGATCCTTGTAAAGTAGATGGCACTTGCCCTGAAGTTATCAAGGTGTACATTTTTAAAGCTGATCCTGGAGAGGATGACTTAGGTGGGACTGTAGACATTGTGGAGAGTGAGCCTGAGAATGATCATGGAGTTGAACTACTTGATCAGAATAACAGTATTCGTGTGCCAAGAGAAAAGATGGTTTATATGACTGTCAACGACTCTCAGCAAGAAGATGAAGATTTAAATGTTGCTGAAATTGCAGATGAAGTTTATATGGAAGTGATTGTAGGAGAGGAGGATGCTGCTGCCGCTGCAGCAGCCGCTGCCGCCCATGAGCAGCAGATGGATGACAACGAAATCAAAACCTTCATGCCGATAGCATGGGCAGCAGCTTACGGTAATAATTCTGATGGAATTGAAAACCGGAATGGCACTGCAAGTGCCCTCTTGCACATAGATGAGTCTGCTGGGCTTGGCAGACTGGCTAAACAAAAACCAAAGAAAAGGAGAAGACCTGATTCCAGGCAGTACCAAACAGCAATAATTATTGGCCCTGATGGACATCCCTTGACTGTCTATCCTTGCATGATTTGTGGGAAAAAGTTTAAGTCGAGAGGTTTTTTGAAAAGGCACATGAAAAACCATCCTGAACACCTTACCAAGAAGAAGTACCGCTGTACTGACTGTGATTACACTACCAACAAGAAGATAAGTTTACACAACCACCTGGAGAGCCACAAGCTTACCAGCAAGGCGGAGAAGGCCATTGAATGCGATGAGTGCGGAAAGCATTTCTCTCATGCTGGGGCTTTGTTTACTCATAAAATGGTGCATAAGGAAAAAGGAGCTAACAAAATGCACAAATGTAAATTCTGTGAATACGAGACAGCTGAACAAGGGTTACTGAATCGCCACCTTTTGGCGGTCCATAGCAAGAACTTTCCTCATATATGCGTGGAGTGTGGTAAAGGTTTTCGTCATCCATCAGAGCTCAAAAAGCACATGCGAATCCATACTGGCGAGAAGCCGTACCAGTGCCAGTACTGCGAATATAGGTCCGCAGACTCTTCTAACTTGAAAACGCATGTAAAAACTAAGCATAGTAAAGAGATGCCATTCAAGTGTGACATTTGTCTTCTGACTTTCTCAGATACCAAAGAGGTCCAGCAACATGCTCTTATCCACCAAGAAAGCAAAACACACCAGTGTTTGCATTGTGACCACAAGAGTTCGAACTCAAGCGATTTGAAACGACACATAATTTCAGTTCACACAAAGGACTATCCCCATAAGTGTGACATGTGTGATAAAGGCTTTCATAGGCCTTCAGAACTCAAGAAACATGTGGCTGCCCACAAGGGTAAAAAAATGCACCAGTGTAGACATTGTGACTTTAAGATTGCAGATCCTTTTGTTCTAAGTCGCCATATTCTCTCAGTTCACACAAAAGATCTTCCGTTTAGGTGTAAGAGATGTAGAAAGGGATTTAGGCAACAGAATGAGCTTAAAAAGCATATGAAGACACACAGTGGCAGGAAAGTGTATCAGTGTGAGTACTGTGAGTATAGCACTACAGATGCCTCAGGCTTTAAACGGCACGTTATTTCCATTCATACAAAAGACTACCCTCACCGTTGTGAGTACTGCAAGAAAGGGTTCCGAAGACCTTCAGAAAAGAACCAGCACATAATGCGACATCATAAAGAAGTTGGCCTGCCCTAATAATACTTCGGCAGACTTTTGTAGAGATGTTGGCTTTGAAGCAGAAAAATCATTTTAAAAGCCAGTCAGTCTCGTTCACATACAATACTGTATATTGATTTATGCTGTGTACAAATAGATTTATTGCTTTTAGTTGACTTTTTTTTTTTATATTTTGTTCAATAGTGTGTTCTGAATTCTATTCAGTTTGTTTAATAAATGGGGAAAAGCAGCAACAAGCAAGTTGCTTTTAATAAAGTAATCCCTGATTCTATACTGAATTTTTCTATCTTAGAAGTTTTATATTTATTTAAATATTTACCTTGCTTACCTTGATGGTACTCTTCTAAGACCATTTAACTTAAAGTTGAGGTAATTTTAGATTGGTAACTCTGAAAGTACTCATGTTGACTTATTTTTTCCCATAAATTTCTCACAATAAAATTGTCAGAGACATCTACTAACATAAACGGGAGATTTTATGGTCAGGTCTAATTATCCTAACATGGAAGTCATTTACTCTTCTTGTTTAATATTTTCAGACCACGTGACAATGAAAGTTTTCATTCGAGCTTTTGCGTCCCTGGCATTGCTGAGTGAAGAGCAGTGGCTGGGTTCGGGTTTACCTTTCGTTTTGTTCAGCAGACAAAATATCCTTTCAGGGGGTGCTTTCTTTGAAGTATTTACACCTTTTGTCAGCATAGCAAACTTTTAGAAAGCTTTACTGAAAATTTTTGCCTGATCCTGTTGTATTTTGTCTGTGCTGCTTTGTGTTGGAATGATTGTGTGCTACAAATGAGACTTACTGAGGACTGCATTTGGAATCTCCTAGAGGTAATTCGTGGCTCATAGGATCTTTTGCAACTTTATATATGTAAATGTACCCTGACTTATGTATATGCACATATATATGACATGTATCATGTGTATCGTGTGTATTGCTTATTTTACATATTTATACACACAATCCCAGTTAGTAGTTGTTTAAAATCTATAATAATGAGAAGTATTAAATTTACAATAACATGAAAGATGCAGGGATGCATGAGAGAGCATTTTGTAAATCATGCTCTTTGGAGAGACTACTCAGGTGAAGAATTAGAAGGAAAATAAGGACACTAGTATTTTTAAAGAGTAAAGGTATTTTCTTTTAAATATCTTTGGTAACTGAAAAATAGAACTTAAGATGTTTCTACATAGAATGTTTTCATATAACTTCAGCTTCATGCCTTTATATTTTTCTGAAAAGCTAATGAGTATCCAGATATATACTCCCTCAGTTCTCTCTGAGAAGCCCGTGAGGGGACTCTGTGTCACCAAGTGAGGGGACTAAGGAAGCAGCGGTTCCATGTACCACAGAATGGGTGCTAATTACGACTTCAACTTGGCAAGTTGAGACTGCTCGTTACTTCTCCGTTACAGCTAGCAGCCTTTCAAAAACGTAACACTCACGTTGGCTTTGATTAGAAGGTAAAGGTGTATTCTCAGTGCATGAGAAAATTTTGAGGCCTTATTTGGAATATCACCAAGTCTTTCACAGTTGTGTTTTTCTTTAGCAGTTAACTTTTTTTTAACAAATAGATATGATTCAGGGTCATAAATACATAGAATGTACTTGGTTACTTAGAATTTGGTTAAGGTGAATTTTGGAGAACAGAAAATAGGTTTTGGGGTCTCGCTTCCCTGGTGGCTCAGAGGTTAAAGCGTCTTCCTGCAGTGCAGGAGACCTGGGTTAGATCCGTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGACGGAGGAGCCTGGTGGGCTACAGTCCACAGGGTCGCAAGGACTCGGACACGACTGAGCGAATCCTTAGTACATTGGCTGTTGACACATGAGTATCTGGCACATTGTGGGAGATTTTGGAATTTCTTTCCCCACTTGTTAGCTGCCTTGCCACTTCATTATGGTGCTCTATCCCCTTTGTGCTATTAGGTTTTTAGCTTTCATCTTTGTCTTTGCCATTGATACGTCTTTGCAAGAGTTATATTTTTAGGGTTAGAAATCTAATAGTGTTTGGCAAGCCTCTGAAGTGCTAGACTGATTGAGTCCATTTCTAAATCAAGTGCTTTAGGCTGGTACAAACACCATCCTTGAATGCCAGTGAAAGCCAAGGCATAGAAACGCCTGTGCCCTTTGCCCCCCGTAACGTGCTTTTTTTTTTTAAGTAACAATTTCGTGATTCATTGCCCTGCAGTACAGTTGAAAGCTCTGTCTGTTTTTTTGTGAGAACCTTTAAAATCTCCCTTAATTTCTATTTTTCCCACAAATAATGTAAAAGAAAACACTTAAAGTAGAAATTTGTTAATTTTAAAACATCCTGTAAAAATTAATACAGAAAATATAATTGGTCATTTATATTTTTTTAAACTAACTGAAAGATAAAGAACACAACAATTTACACACTTTATATTTCTCTTACACGGTCTGGAATCATACACCATTCTTTTCTTTTTAAAGCACAATATTGAAACCTTTAAAAGGTATTTAAGGGTTTGGTCAAGTGAATATGATAAAGTGTATTTGTCTGTATAAAGAAAAACTGAAATCGTAGTCACTGTTATGTACTGACATTAGTTACAACCTAGTTTTAATTCTTAAAATGATTTTGATTAGCAAAGCTAAAAGGATGTTTCAGTTAAATGTTTTAAAGAGGTACAGATTTTTACAAGGACATAATATAAGTTATTGTTCTGTAGAAATATCCTATTAAATATTGTATGTCCCTCCCTCTGTACACTTTGTAAAAAAAGTAAAATACATAAAAAGAAAATCATATAGGGATGTGTGACATTATTGTAATTGTGTACTTGAGAATAACGTGCAAAAATAAAAATCAGAATATTTTCCTGTTAATGTTTAGTCTATTTGATACCAGTACTAAGTTAATGCTTTTTCTTAAGGGAAAAAAAAAATGTACAGTTTTTGTAAACCCAATAAACATCAAAAGCAGTGGATTATTTTCCTTTCCCCATTTCTTAATTCCTTACATGCCGCAGCAGAATGCACAATGCTTGATCGCTTTGAATTTTGTTACTTGGATTTAAATACTACTAATATTTCAGGTCTGCAAATTTGCAAGTAACATTTCAGAGAAGTTAAGAGGTGACTGGGAAGTCTTTTGATGAGCATGTCCTTGAAATTCTTATTTACTTTTATCTTCATAAAGGATTTGTTTTATTAGCATCTCTAATTCCCCCAAGATAAATTTCCCCACGCACAAAATGGTTTTTGAGAGCACTTAAAGTTTACTTCAGCATCAGTCCAATAGCACATTTAGTCAGTGGGGTTGTCCGTACCTCCACAGCAGAATCCCTGCCCTAGAGTTACCCCTTTGTACACAGTTGGAAGGCTTTAGTAGACATTAACATCCTAGAGAACAGTCATTGTTATAATAAAAATCAGAAGTCAGGTAAAAGTTATCAGGAGTCAGAAGAAAATAAAACAGATTTGAGTCATCTTTGATTTTTAAAGATGAGAGCTTATGTAACTGTTGGAACAAGTGTTTCTCTAATAGTTGAAACACTAATCAAAATTTGAGGTAAATGATTAAGAAGATAGGTGAATGTTACTGTCTAGAGCCATAAAAAAGACAAAACCATGCCATGCTGAAAACTGAATCACGATAGAACCCCTGATGGATAACATCTTACTTGTCTGATCCCAACCACAGACAATGTATTGCTCTCTTCTCTGGGAACCTCAGTATTAACAATTTCCTTTATTTCTCACAAATTCTAGGATTCATGTAAGGAAAAGCTTTATGAGTAGTTGAAATCTTACAAGGGTGATAGTACAGGGCAGTGGTTTTGAAAATGTGGCCTGGTAGCAGTGGTGGCATTATTACCTGGACTTGGTCAAAAAGATGCAAATTCTCAGCCCCACCCTAGATTCACTGAATCAGAAACTGGGTGTGGGACCCAGTCAGTGACTTGTGTTTTAACATGTCTTAACATATGACTTTGATGCATGCTCAAGTTTGGAAGCACTGCTTTAGAGCACTTGAGGAACTTTATAAAGATTACTGGTGCATTAATTTTATATAGCAGACAACACACACACATGCCCTAGAAGGAAGCAGTGATGGTGAAACGGGACTCAGTTTATACGTTCACTTTCATACCACTTTATACCCCTTTTGAAATGTGAGCCTGTCAGTAAGTCTATCTTTTAGTATACATGTAAATATCCTGCATGTACTTCATAAATCTTGTATGGCCTCCCCAAAGTTACATTCCTCAAAAGTAAATAGAATTCACAGGAAGGTTCAGCAAGTAAAAAAGAAAGGCTGAAAAAAGTGTGTTGAATTGGCCCAGCAGTACTTAAGTAATTCATATCTGAAAAACCATTTTGCCACATATGCAGCTGTTAAGGTCACATTAAGTTTGCCCTTTTGGATTTTGTTTTATCTTTTGTGTATGTATTGTTTGCCTTTTTCATAAAATAACTCTTGGATTTGTTATATATTGTTCCTGTTATTTTTGACACCTTTGCTATTGTAAATAAATTCCTATTTTTAAGTTACTCTAGTGGAGTGTTGCCTGTAGACAAGGTCTACACACACACATACATGGACACGAGGCTTAAATCACACAGTTAATAAATCCCCAACACGGTACTAGATGGAAGTAATGTGACTCCTTCAGTAGTTCATCACTTCTAGGCCGGATGAAAGTACCACTGTTATACCTACATATAGCATCTGTACCTGCTCAGACTTCAGAATCTTTTTCATGGCCTCTGATGGAAATTCTTAGTCAACTAAGTTTGAGGTCAAAGTAAAAAAAATCAAGAATTATTTTCCTTGATTTTTCCTATTCTCTTGGTCTCAGGTTACTTGTGTTGCTGATACTGGTGAACACAAAGGATTTGGCGTTGTAGTGATGTGCTGAT EMBV3_06547 CGATAAGGCCATCTCTGTGACCTTCACTGTCATCTCCCCTCTACTGAACCCCCTGATCTA Gene GeneID:530068|LOC530068:XM_002693835:125_cdna Constitutive 0 NULL GeneID:530068 15 GENE LOC530068 NULL similar to olfactory receptor Olfr1425 EMBV3_16611 TCAACAATGAGTACCTCAGCCCCGAGCTGCGCGGCCAGGTCTCCTGGAGAATGTCGGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11918 CTAACTTCTCCTAGTAAAACTGGAAATACAGGCCTCTGCTCCTGCCCCCACCTCCAGCAT Gene GeneID:529788|CCDC40:XM_002696196:214_cdna Constitutive 0 NULL GeneID:529788 19 GENE CCDC40 NULL coiled-coil domain containing 40 EMBV3_34396 AGCAGGCTGGATCCCTTCCTGCTAAGTGGACAGGGCTCAGTTCCCAAAAATCCTAGCTTC Gene BVV0102_127557 + 0 NULL GK000013.2:41257476-41909904 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31422 CAAACCGGGGAAGGGACACAGCCCACCCCAAAAGATGGAATCATTCTCTTAACCGTCTTT Gene BVV0102_245364 + 0 NULL GK000005.2:110924710-110979033 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25169 GGTAGCTGCCGTATCTTCTACTGCTACATGGACAAGTGTATGGACCGTTGGACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_06068 AAGCTGCTGTCACCGGGCTCTGCACAGACAGGGCGACGCAAAGCAAGGCAACGATGACAT Variant GeneID:515465|ICT1:NM_001034493:407_cdna 122^208 1 EMBV3_35572 GeneID:515465 19 GENE ICT1 MGC127253 immature colon carcinoma transcript 1 EMBV3_15130 GAAAGTGGCCAAAACCAAGACAAAAAAGGCTGAGAAGAGTCCACCTTCCACCAAACGCCC Gene GeneID:767962|MGC134066:NM_001077030:68_cdna Constitutive 0 NULL GeneID:767962 8 GENE MGC134066 NULL transmembrane protein ENSP00000340100 homolog EMBV3_39199 AGTGGATGGGCAGATACTGAGGTGACACAGAATAGTGGGAGCAGAACTTGGAAGGGACCA Gene BVV0102_129230 + 0 NULL GK000007.2:17565625-17569053 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212131 TCONS_00212134 TCONS_00212130 TCONS_00212132 TCONS_00212129 1 XLOC_130094 Coding TCONS_00212132 XLOC_130094 Coding Coding ARHGEF18 7:17513832-17567526 j TSS159255 4934 1 TCONS_00212132_3 945 19 0.908461065688265 0.00157685445196124 0.000565805538666189 0.000678562388181577 1.44559545122664e-07 0.000443044082218643 0.000550658463783727 3.61350567449292e-07 0.000349032436503999 0.000556176949578243 1.75945447122827e-08 1.3566524171124e-08 8.62877791139594e-05 9.37264546746722e-05 6.05110604357801e-05 0.000108692312584589 1.48160404927557e-06 6.72981982102122e-05 1.87710835928658e-07 0.000480514222811237 0.000821064283216357 3.98402771291047e-06 2.02234332085605e-05 0.00229851137929712 0.00181071270847055 3.90560576467999e-08 0.000658221786637367 9.87600705347126e-05 0.000498509465738584 2.37958696883009e-05 0.000210444078182826 XM_600806.7 ARHGEF18 PREDICTED: Bos taurus Rho/Rac guanine nucleotide exchange factor (GEF) 18 (ARHGEF18), mRNA. 0.0 8015 100.00 0.900486420753952 XM_005272463.1 ARHGEF18 PREDICTED: Homo sapiens Rho/Rac guanine nucleotide exchange factor (GEF) 18 (ARHGEF18), transcript variant X1, mRNA. 0.0 2632 78.54 0.607823267126064 TCONS_00212132_3 sp|Q6ZSZ5|ARHGI_HUMAN ARHGI_HUMAN Rho guanine nucleotide exchange factor 18; 0.0 1309 75.78 0.938624338624339 2 coding 0 1 1 1 0.0245746291757418 0.817546304548089 0.0182270579664593 0.720573710465489 CCCCGTGGCTTCCCGCTTCCGGCTCCGAGCCGAGGGCAGCCGTGGACCCCGGGAGACCGGGCGGCAGCAGCGGTGGGGAAGCTAACGGAGTTGCGGGCGGCGAGTGACCTGCGGCGGACTGAGCATCCCTGAAGGAGCACCCGAGGGCCACCCTCCTGTCTGATGGCAGCCCACGCCCGACCAGGAATGTCGGCATGACGGTCTCGCAGAAGGGGGGTCCACAGCCAGCACCCAGCCCAGCGGGAACCGGGACAAGACTCGGACCACTCACAGGAGAGATGGATGAAACTGATACACTGTTTCCGAAGCTCAAGCAGGTGGCCGATGACTCGCTTTTTCTTACATCTTCCAGCACTGAGCCCATCTTTATAGAAGAGCTGATGCAGACGGAGGCCCACCATGTGCGGACGCTCAAGATCATGCTCAAGGTCTACTCCCGGGCCCTGCGGGAGGAGCTGCAATTCAGCCCCAAGGCCGTCAGCCGCCTGTTCCCAGGCGCAGACGACCTGCTGGAGGTGCACAGCCACTTCCTGTGTCGGCTGAAGGAGCGCCGCCTGGAGTCGCTGGAGGAGGGCAGTGCCCACAACTACATCATCCGGAAGATCGGGGACCTCCTGCTTCAGCAGTTTTCAGGTGAAAACGGAGAGAGGATGAAAGAAAAATACAGCGTCTTTTGTAGCGGTCACAACGATGCTGTCAGTCACTACAAGTTGCTGCTGCAGCAAAACAAGAAATTTCAAAACTTGATCAAGAGAATCGGCAACTTCTCCATCGTGAGGCGGCTCGGCGTGCAGGAGTGTATCCTCCTGGTCACCCAACGCATCACCAAATACCCTGTGCTGGTAGAGCGAATTATCCAGAATACAGAAGCTGGCTCCGAGGACCACAGAGACCTGACCCAGGCCCTGAACCTCATCAAAGACATCATCTCACAAGTGGACGCCAGGGTCAGTGAGTGCGAGAAGGGCCAGCGCCTCAGGGAGATCGCTGGGAAGATGGACCTCAAGTCCTCCAGCAAGCTCAAAAATGGGCTGACCTTCCGCAAGGAGGACATGCTGCAGAGGCAGCTCCACCTGGAGGGCACCCTGTGCTGGAAGACCACCTCTGGGCGCCTGAAAGACGTCCTCGCAGTCCTGTTGACAGATGTGCTGCTGCTGCTCCAAGAAAAGGATCAGAAATACGTCTTTGCATCCGTGGACTCCAAGCGCCCCGTCATCTCGCTGCAAAAGCTCATCGTGAGGGAGGTAGCCAACGAGGAGAAAGCCATGTTTCTGATCAGTGCCTCCCTGCATGGGCCCGAGATGTACGAGATCTATACCAGCTCGAAGGAAGACAGGAACACCTGGATGGCCCACATCCGGAGGGCCGTGGAGAGCTGCCCAGACGAAGAGGAAGGGCCCTTCAGCGAGGCCGAAGAGGAAAAGAAGGTGGTCGAGACGCGTGCTGTGAGGCTGAGGGACTTCCAAGAGCGACTGAACAGGAAAGACCAGCAGATTGCACAGAGCCTGAGCGAGAAGCAGCAGATCTACCTGGAGATGGCAGAGATGAGCGGGCTCGAGGACCTCGCCCTGTCTCGGCTTCTCTTCCGGGGAGGGGACCCCCCCGAGAACCTGCAGGGCGAGCTGATTCTCAAGTCAGCCATGAGTGAGATCGAAGACATCCAGAGTTTCATCTGCAGGCGGCTGGGCAACGCCTACTGCCAGGCAGAAGACGGGGGCAGCGCAGGCAGCCCAGGCAAGGACGGCAGTCTTCAGAAGAACATGTGCAGCAGTGACCTCAGCCCCCGAGACTGGCAGGGCCTGGTGAGCAGCCTGGACTCGAGGCCTGGAGACACCCAGGGGGCCCCCGAGGAAGCCTCAAAGGTGGCAGAGTCACCAGGTGCAGACCCCGGCCCCCACCCACCTGCGGTCCTGGAGTTGGAGCTCGTCCAGCGGATCCAGACGCTGTCCCAGCTGCTCCTCAGCCTCCAGGTGGTCATCGCCCAGCAGGACAGCTACGTGGAAATTCAGAAAGCAGCCATCCAGGAGCGCGAGAAGCAGTTCCGGCTGCAGTCAACACGCGGGAACCTGCTGCTGGAACAGGAGCGGCAGCGCAACTTTGAGAAGCAGCGAGAGGAGCTGGCAGGCGTGCAGAAGCTGCAGGGCCAGCTGCGGCTGGAGCAGCAACGCTGGGAGCGCGAGCGGGAGCAGCAGCGCCGGGAGCTGGACCAGGCCTCGGCGCGGCTGCAGCAGCGTGAGAGTGAGTTGCTGCGGCTGCAGGAGCGGCTGAACCAGGAGCGCGAGGAGCTGGAGCGCCAGCGCCAGGCCTACCAGCATGACCTGGAGCGGCTGCGCGAGGCCCAGCGCGCCGTGGAGCGGGAGCGCGAGCGCCTAGAGGTGCTGCGCCGGCTCAAGAAGCAGAACACAGCGCCTGGGGCGCTGCCGCCGGAGGCACTGGCGGAGACCCAGCCTCTAAGCCACACTCCCAGCTTCAATGGGAATGGGCTGGATGGATCCATGACCCTGACCAAAGCACCAGGGCCCCGACCCACCTCGCTGGTGTCCAGTGCGGGGTCCGAGTATGCCGAGCGCCCCGAGGTGGCCCGCAGGGACAGCGCCCCGGCCAAGAGCGAAGTGCCCATCCAGCTGCTGAGTGCCACCAACCAGATCCAGAGGCAGGCAGCTGTGCAGCAGCAGATTCCCACCAAGTTGGCAGCCTCCACCAAGGGCGGAAAGGACAAGGGAGGCAAGAACCGGGGCTCCCAGCGCTGGGACAGCTCGGCCTCGTTTGACCTGAGGCAGCCGCTGCTTCTCAACAAGCTCATGGGCAAAGAAGAGAACACCTCTCGGAACCGCCGCTCGCTGAGTCCCGTCCTGCCCAGCTCCACGCCCCACCAAGACCCCAGCCTTCCAGCCCCGACCCCGGGCCCAGCCGATGTCCCCACCGAGTCCCTCCCCCTCAAGACCTGGGGGCCATCCTTTCCACCCGGGGCCCCGTCCTCCACACCAGTCAACAAGGAAGAAACGGGCAAGGAAGACGTCATCTTCTTCTAGGGGGCATGGCTCGGGGTGCAGACCCCTCCCTGCACCGCCCACTCTTCATGCTCTGTGGCCCCACCCCACCCCCAGCCCACCCTCTCCCCTTCCCACACAGGCCTCCTCTGACATCTGCCAGGACGGGGCAGGCAGAGCTGGCCTGCTGTCTTGAGGCTGCTCGCTCTGAAGGATTAGCAGTGGTGCCTGGGCAACTTTGTAAACCTTTTTTTTAACGTGAAAAGGAAAGTTTGTAATGGAAGGCTGAAGCAAAGCTAACCCACTGGAGCTGCCATCTGCCATCATAGCACCCCATTCCAGCAGAGGAGAGTCCCACTCTGGGCTATCTTTCCAAGGTAGTGACCAGAGCCACCAGGAGACCCTGCAGCAAGCCACAATGGCACCAGAAGGGGCCTGATGGGGTTGGCTCTGTCCACAGAATCAGGCCGAAATGACTTCTAAAGCAGAGACACGAGTGGGTTTGTGGTGAACTTCTAGGCCAGGATGCGACCCCACCCAGGGGTGGCACACAGTTCACCCAGGACAGAGGGCCACAGGGCAGGCAGGGTGGCTGAAGGGGTTGGCCCATGGCGTGCAGGTATGTCCTGCAGGTTCGGAATTTCATCCTGAAAGGGGCTGACCGGGAGGGGACAGACCACCGCTCATTTTAATCTGGTGGAGGTTTTTAAAACCCACTCTTGTCGAAGTTGGTGCTTTCTCAAAGCGCCTCCCAGACTCAATGCCTGGGAAGCCAAGCCCAGGGCTTCCACCAGGGCTGGCGCATGCCTGAGGGTCCCAGCCCCGGATGGAGAGTCCTCCTTCCCCATGAGGTGGCCCCCAGCTGGCATCTCCAGTGGATGGGCAGATACTGAGGTGACACAGAATAGTGGGAGCAGAACTTGGAAGGGACCAGTGTGGCCTGGGCAGTCACTGTTGGCAGCGAGTGCACAGATAGCCGCCTCACAGGCACCTCACGTCCAGTGAGCTGTCGCAGGTTGTCATCAGTCCCCGAGAGGAGGGCGAGGACCACTGGTCCAGCCTCGTGGTGCAGCCGCAGTTGTTGGGGTGGTGCCGCGCGTGACAGTGGGCACACCCACATTCCAGCTCTGGCCAAGTGCAGGCTCGGGGCCAGGGAGCATTCCAGCCTTTTCCTGCACCCCAGACACCCCTGCAGAACCCAGTATCCCGCCAAGCATTGGTGGGAAGGCAGGGTCTGGGGTGGAGCAGGAGCTTGGGCACCATGGCCCACAGTGACAAGGAACTGACCTCAGTCCTGGAGTGCTCCAGAGGAGCAGCGGCCCCCTCCCCGGGACACTTCCGGCCACCCACGCCACGTCTGTAACCACTGTGTTTGGTCCTGAGACGCATCGGAGCACTTTAGAAAAGCTGACTTTACATTCCTGTCCTGTCGTGAAGAGGACATTCCTGGGCCCCGTGCCCCCACCCACAGGATCCTCTCACCCACCCAGGGGATTCCTGCAGGGATAAGTTCAACGCCACGTGGTGGGAATCGGCCACAGAGGCTTCCAGGTGGTGCCTGCAGCGGGGCAGCACCATGGGCCCGTCCCACCAGGACCTTGAGGCCACTCCCAGGTACAGCCCAGTCTCGTTTGTAAAGTTAGGAGTTGAGCAAACATTCCTCTTCGGTGGGGTCTGTGCACATCTTCGTTAATTGTGACCATGACCTTAGTCAACCCGACGATCATTTTTTACAATGATAGCAGCATCTCCTCACTGGGGGTTATGTCTGAACTGCTCTAGAACTTAAGACCTGATTCTTGCAATAAACATGTCTAGGGGGAGCGGACCGGAGTCACTTTCTTTGGGGTTTTGTTCTAGGACAGCCTGCCCAAACTTCAGTGCTGCAGTCTGCGTGGCGGGGGGCAGCAGCACTCAGACCCTCTGTTTTGCTAGGACCCTGGG EMBV3_26579 GTGGTGGATGCCAGCCCGTCACGAGAAAAGGTCCTCCAGATGGTGTTAAGTGTAATCCAA Gene GeneID:784304|CMPK2:XM_002691489:388_cdna Constitutive 0 NULL GeneID:784304 11 GENE CMPK2 NULL cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial EMBV3_11056 GTCATGTCTTAGCTTAAGTGTCCTCTTTACCAGAAAGATTGAGCAGACTGATGCCTGCAT Gene GeneID:538481|TET2:XM_002688092:151_cdna UTR3_Alt 2 NULL GeneID:538481 6 GENE TET2 NULL tet oncogene family member 2 EMBV3_02757 ATCAGGGTCGGCTAGTTTTGACTCGAGGGTTAAGGTTTGTCTTCTCCGCAGGATGGCTCA Gene BVT0102_016759 - 1 EMBV3_27748 GK000013.2:67120111-67257418 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043693 1 XLOC_025994 NonCoding TCONS_00043693 XLOC_025994 NonCoding NonCoding - 13:67170467-67171348 - TSS32260 695 1 TCONS_00043693_2 53 0.497841726618705 2 0.2125 5.87296367629109e-05 0 0.000156452499484359 0 0 2.57341782144816e-06 0 0 1.13527070630501e-05 0 5.2700536185934e-05 6.68834377078931e-05 4.12847043468118e-06 0.000653144198482411 0 0 0 0 1.0317890817529e-05 0 2.18397564320935e-06 2.13544421554979e-05 0.000118800592819725 0 3.4891605229422e-05 0 0.000126456491911478 2.76408114486252e-05 0.000169387576135295 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 4e-118 428 94.58 0.39568345323741 0 noncoding 0 0 0 0 -0.0233756866979301 0.81866997442245 0.0212962410248772 0.715169259260862 CTCCAGGAACAGAAGGGTGAAGAGGGAAAGGGTTCCCCCAAGAGCACCTGACGGAGAAGGCGATGGCACCCCACTCCAGTACTCTCGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCGAAGAGTCAGATACAACTGAGCGACTTCACTTTCACTTTTCACTTTTATGCATTGGAGAAGGAAATGGCACGCACTGCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGAACTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAGCAAGAGTACCTGAAGAAGCCAAAAAAAACCACAAAACAAACAGCTTTGGGACTTAAAAAAAATGAGCCATCCTGCGGAGAAGACAAACCTTAACCCTCGAGTCAAAACTAGCCGACCCTGATGAGCTCCTGCGTACACCCGGCCAGCCTCCTGGCTGGGTCCTCGCCCGGCCTCCAGCCCAGAGCCTGGCACCAAGGCGGTGCCTTCAGATGTTGTTTGACTAAATGGATGGAGATGGTGACAGCACTCCTCGAGCATTCGCGGTGTGCCAATTCTCCATAATTTTCTAGACATCTTGCTTTACCCTCACAACTGTCTTCTGTGGTAGTGTTTTGATTTCCATATAACAGATTTGCTCTTTTATTTATGT TCONS_00046095 r 5' 45255 TCONS_00046095 r 5' 45255 EMBV3_01208 CCTCCAGTCCCATCCAGCCTTGTTCTCTTTCTTTTGAGGAACCTGTTAAAAAGGCAGATT Gene GeneID:508320|STK19:NM_001097997:72_cdna Constitutive 3 NULL GeneID:508320 23 GENE STK19 NULL serine/threonine kinase 19 EMBV3_17606 AGGGTTCATGTCTTGGGGGCAGCCAGGACTGTGTCCCTCAGCAATGCTTTTGACTCCTGG Gene BVV0102_456358 + 1 EMBV3_42741 GK000008.2:73088395-73147843 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14876 ATCCAAGTTGAATTCTACATGAAAGTGTTATTATAAACTTGCCAAAAAACAGGATACCGG Gene GeneID:537659|TTC28:XM_002694620:173_cdna Constitutive 2 NULL GeneID:537659 17 GENE TTC28 NULL tetratricopeptide repeat domain 28 EMBV3_19228 AAGGAGTCCCTGAATCTCTGGTACGACTGCACATGGAATAGTGACAACAAAACGTGGGCC Gene GeneID:535273|EMP3:NM_001024562:328_cdna Constitutive 0 NULL GeneID:535273 18 GENE EMP3 NULL epithelial membrane protein 3 EMBV3_28690 CTCAGTGCATGCATATTAGGAAGTTTGTAGTTCTCCAGTGACTCACTGATACTCATTTAC Gene BVV0102_043660 - 1 EMBV3_35811 GK000020.2:12139487-12352177 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16198 GTGGTGGGCACCGTGCAAGGGCCTGTCCCGGTTCCCTGGGTTCAAGGAGGTCCGGCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17481 CTTGGAAACCGATACCGTACAGACCAAATCGCGCCTGAAAAATGGGCAAAAAGGGAGGAC Gene GeneID:789803|LOC789803:XM_002695440:76_cdna Constitutive 0 NULL GeneID:789803 18 GENE LOC789803 NULL hypothetical LOC789803 EMBV3_21332 TGCCATGTATGAACCGCCCCTGTGCTTGCCCCTGCCAGCCCTCAAAAATACAAAGAACAA Gene GeneID:100125299|EME1:NM_001103332:2_cdna Constitutive 0 NULL GeneID:100125299 19 GENE EME1 MGC152603 essential meiotic endonuclease 1 homolog 1 EMBV3_09100 CCTTCTGTGATGCAAACACCATCACCCATTATTTCTGTGACATCCTCCCTCTGCTCCAGC Gene GeneID:781509|LOC781509:XM_002699156:27_cdna Constitutive 0 NULL GeneID:781509 29 GENE LOC781509 NULL similar to olfactory receptor MOR167-2 EMBV3_37371 GAACCCCGGGCCACTCTCTCCTTTGTCCTAACTGGTTGGTGGCTTTGCCAAGAGATTTAA Gene GeneID:523401|GAL3ST3:NM_001075840:39_cdna Constitutive 0 NULL GeneID:523401 29 GENE GAL3ST3 MGC142460 galactose-3-O-sulfotransferase 3 EMBV3_28992 TAGTACAGATGAAGGCCAGTGGTGGAAGGACCATGGGAAAAAGGCTAGTTAGTGTGGCTG Gene BVV0102_306987 + 0 NULL GK000014.2:64352489-64564493 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38208 GCGAGGGACTCCCGGAGTCTGGCACCGCAGTACAAACACCTGAAATATAAAAGTGAGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37635 TGCAAGGCCAGGAGAAAAGCCCAAGAAACAAACGAGAGGAGTCCCTGGAGGCAAAGAGGA Gene GeneID:538109|KIF19:XM_002696220:295_cdna Constitutive 0 NULL GeneID:538109 19 GENE KIF19 NULL kinesin family member 19 EMBV3_13135 TCCACTAGACTGTGAGTAGTTTGAGGGCAGGCTCTTGTTCTTCCCTCTGTAAGGTTCTGG Gene BVT0101_082206 + 0 NULL GK000019.2:39447801-39460691 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16394 GGGGCCTCTGCCCAGACCAGCACAGCCCTCAGGCTGGAAGATGCTTTAATTTCCAAAATT Gene GeneID:539213|LHX3:NM_001038620:175_cdna Constitutive 2 NULL GeneID:539213 11 GENE LHX3 NULL LIM homeobox 3 EMBV3_15420 CAGAGAGTTGTCTGCACGGCTGGTCTCAAGTGGTATCCTCACCCTGCTCTGATTTACTGT Gene GeneID:282647|PAPPA:XM_002689953:8_cdna Constitutive 0 NULL GeneID:282647 8 GENE PAPPA NULL pregnancy-associated plasma protein A, pappalysin 1 EMBV3_36721 TTTTTATGGATCTGCACCAGACTGTTACCTGCGGGGGACGGAGATGCGACTGTTGACACT Gene GeneID:535156|LOC535156:XM_002694525:452_cdna Constitutive 1 NULL GeneID:535156 17 GENE LOC535156 NULL similar to signal peptide peptidase 3 EMBV3_06730 TCCAGGAAGTTGCAGAATCAGCTTTGGAGGCTACCTTGCCAGGAAAAGAGGCAGCAGTGT Gene BVV0102_309871 + 0 NULL GK000002.2:47858328-47998596 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14845 TGGGGCAGAAGCCGAATAAACACCTGTCCTCTCACCGAGTTTTCTTTGCGTGTCGGAGTT Gene BVT0102_210131 + 0 NULL GK000018.2:62345591-62346828 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087499 1 XLOC_052508 Coding TCONS_00087499 XLOC_052508 Coding Coding CCDC106 18:62340991-62348205 j TSS64970 4312 3 TCONS_00087499_7 278 0.0391929499072356 7 0.403160959378899 0.000487638316526358 0.000792173345217727 0.000439098010739589 0.00021611169542855 8.80996096777468e-05 1.65971700770216e-06 0.000329369633505575 0.000219043152835719 0.000284971320613754 0.00010477809230045 0.000220082749513215 5.71958040465219e-05 0.000131704021613421 0.000269580881288646 0.0001984425602507 0.00054065914520052 5.08175257071068e-81 9.67784260304257e-05 0.000118286703398884 0.000969844545986146 0.000194165142938458 0.000135755173254731 0.000161244759072905 0.000188752377112233 0.000229880425228687 0.000304078633867894 0.000401379306735776 8.81335221685663e-05 8.75896619701999e-05 0.000229248940275976 XM_005200089.1 LOC101908908 PREDICTED: Bos taurus coiled-coil domain-containing protein 106-like (LOC101908908), transcript variant X1, mRNA. 0.0 2498 100.00 0.320964749536178 XM_005258827.1 CCDC106 PREDICTED: Homo sapiens coiled-coil domain containing 106 (CCDC106), transcript variant X1, mRNA. 0.0 1079 86.33 0.208024118738404 TCONS_00087499_7 sp|Q1LZ89|CC106_BOVIN CC106_BOVIN Coiled-coil domain-containing protein 106; 0.0 563 100.00 0.996402877697842 6 coding 0 0 0 0 -0.217310504862488 0.203695510927203 -0.0114869656210376 0.850005785647517 ATGCTGGTGCTGCCGGCCCCCGGCCCCCGGCCCCCGGCGTTTCCCTCCGCTGAGGCCATGCAGGCCCCTCCCCCTCGGACAGGCGGGTCCCCAGAGCCCGGACCTTCCTGCTCCACAGGATGTCCCCAGACCTCGCCCTCTTCTTCCAGGCCCAACCACTACCTGCTCATAGACACCCAGGGCGTCCCGTACACCGTGCTGGTGGACGAGGAGTCGCAGAGGGAGTCCGGGCCCGATGGGGCGTCGGCCCAGAAAAAATGCTACAGCTGCCCCGTGTGCTCCCGGGTCTTCGAGTACATGTCCTACCTGCAGCGACACAGCATCACCCACTCGGAGGTGAAGCCCTTCGAGTGCGACACCTGCGGGAAGGCATTCAAGCGGGCCAGCCATCTGGCGCGCCACCACTCCATTCACCGGGCAGGCGGCGGGCGGCCCCACGGCTGCCCGCTCTGCCCTCGCCGCTTCCGAGAGGCGGGCGAGTTGGCCCAGCACAGCCGGGTCCACTCCGGGGAGCGCCCTTACCAGTGCCCGCACTGCCCGCGCCGGTTCATGGAGCAGAACACCCTGCAGAAGCACACGCGGTGGAAGCACCCCTGAGCCAGGCTGCGGGCCCCCCCCAGGTACCGCGGGATTCTCGGGGCGGGGGGGGGGGGGGCGGTGCACATGGACACCTGTTGTCCTCAGACAGCCGGCGAGCACCAGGGGGCCTTGGACACAAACAGACCCACAGCTGCGGGGAGGCTGATCCCGGCCTTAAGGAGAAGTCCTGCAGTCATCTCCGGGTGTTTGGGAGATAGGATGAGAGCAACACCCGACGTTTCCTGAATGGAACCCTCTAACCTCAGAGACACCAGCGATTCCACGACTGATCCCTGACTGCCGGGGTTGGGCCGGGTTAGTCTGGGCCCGATGGGGCCCAAGAGTGCCATGTGTTACCGATCTCGGGCCTGAAAACTGTGCCTGGGGGCCATCAGGAATCTGCACTGTCTTCCTGAGACCCGCCCCCCTTCCTCCACAACGTGCAATGCTGGGGGAAAGGGCCCCAGACTTGCCTCCCACTCCCCAGCCAGAGGTGGAAACTGGACACTCACTCAGTAAACACGTGGTCCACTTTCAGCACCCGAGGTCGGTTCTGGGAGACTATCTCTGCCCACTGCCTGGCAGGGAGACTTTGCAAGTGCCTGGCCCACCTGGCTGGGGAACGGGAAGGTTGGCCTGTGATGGGGCTCATCCGAGCTTGGCTCCTGACCACCTGTGTCATTGAGGCAGAGTGTTTTTAATCTTTCTAAAAACCACGACCCATTGTAAGAAACACATTTTATACGGCAACCCGGTATACAGGTACACAAAATACATGCAAAACAAAGGTTTAACAATAGTTACTTCTGCGTGCAGGCCTCTCATATTTTTTTTCCATCTATTTCATATCTGCTGTTACAAATTTCATTCTACCATATTAAATTTTCTGCGCATGAATATGTAGTTTGAAAGACACCGAACTAGGGCAGGTGCCTCCCCCTGCACGTTTTGACACCGGTAGTGAAGTGAGGGGCGAGGGGCGTGTGGCCAAGACGGTTCGACTCTCCAAATGTAGGGTTAAAAAGCACTGCTCTCTTAAGGGCCGGTAGGAATTCTGGAGCACGGAAGCTACCGGAGAGAGGGAGGAGAGGCAGGTGGCGCTGGGGCAGAAGCCGAATAAACACCTGTCCTCTCACCGAGTTTTCTTTGCGTGTCGGAGTTGTGTCAGGCACTGTGCGGGGCCTCATCTCTTCCGACCTCTTGTTGGGTGGAGGAGAAAACCAGTTGTCTCTACTCCTTAGAGAGGGAGCATCCCATAATCTGACTCCAGATAACATTCATAGGGTCCCGAGCTTGAGTTCTGGCCCCGGCCAGGCGCTGGGCTGAGCGTCGTATCATTTTATCCCCACAACAGACCTAAAAGGGATTATAATCGCCCCACTTTACAGTGGCCCTGAGGCGCTCAGCTGCCGGGGTCTGCTGAAGGCCGCACCATGAACAGCCGGAGGAGGCCAGTGAAGAAGGACAGCGAGGCCTTGGAGATTTCCATCCCCTTCGATGAGACGCCCCACCTGGACCCGCAGATCTTTTACAGCCTGAGCCCCTCTAGGGGGAACTTCGAGGAGCCGTCGGAGGCTGCCTCCCCTACAGCGGCCCTGATGAACGGCGTCCGGGCCCAGCTGCACCTGGCCCTGGAGAGGAACTCCTGGCTGCAGAAGCGCATTGAGGACCTGGAGGAGGAGCGGGACTTCCTGCGGTGCCAGCTGGACAAGTTCATTTCCTCTGCCCGCCTGGACGCAGACGACCACTGCCGGGGGAAGCCCGGGCCTCGGCGGGCCGAGGGGGACGGCCGAGGGGGGACCGGGGGCGAGGCCTCAGACCCCGAGTCAGCTGCCTCCTCCCTCAGCGGAGCATCTGAAGAAGGCAGCACCGTGGAGAGGAAGAGGCAGAAGCAGAAAGGAGGCCCAGGCCGGCGGCGCTTCGGGAAGCCCAAGGCCCGGGAGAGGCAGCGGGTGAAGGACGCAGATGGGGTCCTCTGCCGCTACAAGAAGATCCTGGGCACCTTCCAGAAGTTGAAGAGCATGTCTCGGGCCTTCGAGCACCACCGAGTGGACCGCAACACGGTGGCGCTGACCACGCCCATCGCGGAGCTGCTCATCGTGGCCCCGGAGAAGCTGGCCGAGGTGGGCGAGTTCGACCCCTCCAAGGAGCGCCTGCTCGAGTACTCGCGCCGCTGCTTCCTGGCCCTGGACGAGGAGACCCTCAAGAAGGTGCAGGCCCTCAAGAAGAGCAAGCTGCTGCTTCCCATCACGTACCGCTTCAAGCGGTGATCCCACCCCACCTAGCCTGGCGCCCGCCCTCCAGCTCCTGCTTCCCTCGCCCGGCGCTCGGGGCCCGCGTGTGCACGGGCGGTGGGCCCCCACGAGGGCGGCTCGTTTCCGCTCGGACCGCCACCCCCTCCCCAGGCCCCCTGTATATAGGTCTGTCCCCTGGGCCTCTCACAGCCCTAGAGTCCACCCTGCCCTCCGCCTTCCCTGGGTTGGGGGCGGTCCTCGCCTAGTCCCGCTTCCAAGAGAACCACCATCCAGGGCCCGGTTCTGTCTTCCCTGACCACTGGCACCCCCGCATCTGAGCGGCACCATCCTGCCCTCGCTGGGCCCTCCCTCCTGGGAAGCTGCGGGACCCTGCGGGGCGAGGCCACTGTACATACCCCGTCCGCACCCCAGCCCCGCAGCGAGCTTCCCACCCGCCTTCCGAGACCGCCCGAGTCCACGTGAGACAGAGCTATTAAGATAATTTAAATTAAAAAGATGATAAAATTTGGAATAAACTAGGCCCCGGCCTTTTCCTGGGCAGGGGGTGGCCGTTGCCGCGGAGACGGTGACGGGGGCTCTGGAGGATTCGGAGCGCGGACCGTCAGGCGGGAGCCGGGGAACTGGGCGAGACAGGATGTAATTAGCCCCCCGCAAAGGCAGGGGTGGGAGGGGAGGCAGCTGTGCCCTGGGGAACTCGGGGGCGGGGCAGCACTCCAGGGAAAGTGCGTGAGCACTACCCGCTGGGATACTGGGACCAGAGGCGCGGCGGCAGGAGGAGGGACTCCATGACCTCCAACGGAGGTGGCCGGCCCGGGCAGCCGGAAACCTCCGAGCTGACGACTCCGTTAGGAGGTGGTATCGCGAGATTATCCATCTCCCGGAAGTGTCCGCTGCGTCGCTCGCGGCGCCTGCGCGGTCGCCACGGCAACTAGTAGAGGGGCGGTCTTGCTTAACGGTCGGGAAAGCGGGGCCCTCCCCGGGGGAAGGGGAAGACTCGCGCACGCGCGCTGAGGGCTCTGGAAGCGGGGGTGGGGGTGCCTTTCAGGAGCAGCTGAGAAACCGCGCCTCAGACCGACGTCTACGCAGGCGCAGAAGCCCATCTGCCCCCCCCCCCGCCCTCTTTCACCCTGCGCAGGCGCACAAAGCCGCGCTGGCAACCTCCGCAGCGGCCGCGCGCACCCTTTACCCCGCTGGCTGCTTTTGTCTCGCGCAGCCTTCTTAGGCCCTCCGCAGGAGCGGCCCTTTTTTCCCTCCCCTTTCCCCACCCGGAGAGTCAGGTGCCGAGAGCTGGGACGCTGCCCTTCTCCGTTTCCTCTCCCCTGACCCACCTCGCCTCCGTCCTCCCTCCCTTTTCGGTTCCCGGAGCCGGAAGGAGCCGAAGCACTGACGGAAAAAGCCGAAGGTGCCACTGGAATCTCCGGAAGGAGCCGAAGTTTGGAAACAGCTTGATCTCTGACTGGGTCCGAAGGCGAGCGCNN EMBV3_17092 GGAGGCCCCATCCCTCCGGGTTTCTTTCAGCCTCCGGGAGGAGTTCCTGGGACACAGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43405 TGTGTGGGGGGGTTCTGTACTAATTTCCATGGCCGGTGGCTTTTCCTTCCATGCATCACT Gene GeneID:525252|ATXN7L3:XM_002696041:325_cdna UTR3_Alt 2 NULL GeneID:525252 19 GENE ATXN7L3 NULL ataxin 7-like 3 EMBV3_42654 TATAACAACCGCTGGTATCAAATGGGCATCGTCTCATGGGGTGAAGGCTGTGACAGGGAT Gene GeneID:280685|F2:NM_173877:15_cdna Constitutive 0 NULL GeneID:280685 15 GENE F2 NULL coagulation factor II (thrombin) EMBV3_28976 ACAATTATGATTTCCCTCCTCTACCATCAGGCAAATACCACATTCAGTTTCTAATTCCCT Variant GeneID:539692|SPATA22:NM_001038186:153_cdna 320^380 2 EMBV3_29355 GeneID:539692 19 GENE SPATA22 MGC134099 spermatogenesis associated 22 EMBV3_03822 TGAATCAACTAGGGCTCTAATCCCAAAGGACATCCCAGTCCTGCCCTGAAGGCCGTTTTG Gene BVV0102_213951 - 0 NULL GK000007.2:13899368-13904157 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211911 1 XLOC_130037 Coding TCONS_00211911 XLOC_130037 NonCoding Coding - 7:13902774-13904099 - TSS159140 1325 3 TCONS_00211911_3 73 1 0 9.75503162946116e-05 0.000395827448961497 0.000803147692823974 5.19378916544284e-05 4.48010247106651e-05 5.39933099464136e-06 0.000208479890605539 0 0.000226575515549842 3.30977177535295e-05 0.000368110552268717 5.45556536339212e-05 0.000228989331037337 0.000830007300715025 8.61079225202438e-05 0.000115606262622956 0 5.42323667272342e-155 3.93423461573887e-05 5.95152369943018e-06 0 6.435147971722e-06 0.000161176007600246 0.000130873771091365 0.000238789066097393 4.28553940020612e-05 0.000265163212310979 0.000136753749263545 2.23994173382739e-05 7.09982696072229e-05 XM_005208657.1 TNPO2 PREDICTED: Bos taurus transportin 2 (TNPO2), transcript variant X3, 3e-53 214 100.00 0.0883018867924528 XM_005259880.1 TNPO2 PREDICTED: Homo sapiens transportin 2 (TNPO2), transcript variant 8e-67 259 76.15 0.289056603773585 0 noncoding 0 0 0 0 -0.163816201214916 0.215647745288478 0.00881537306003123 0.868278807572583 GCGTGTCTCTCAAACCCAGTTCCTGTTCAGCGGAGCCGGCTGAGGTGGGACTCGTCTGCTTCTTTGGGATCCTGACTCTTAGAGTGGAGTGTGGATTCAACTGACTCGCCCCAAATCCTGGCGGCCTCGGTTTTCGTCAAGAGAGGCCTTAGGTATCTATTTTTCATGAATGAACGGAGCCAGGACTGACATTGCCAAGGGCAAGTGGACTGAGAAATCTGTCTCCTTCCAGTCTGGGGCTAGAGTTAACCTGTGCCTCCCCGCAGGCCAAAACGGCCTTCAGGGCAGGACTGGGATGTCCTTTGGGATTAGAGCCCTAGTTGATTCAGTAAATGTTGGTTTAGGAAGGGTCCAAATGCAGTAAAAGGACCACCTTGAACCTCGGGGAGTAGAAACCACGTTTTTGAGGAACAATTTACTTCAGGTTTTGTAATGCTTAACTTGGATTATCTCTAACCCAGCAAACTAGTCTTGTATCTGTTCGACAAATGGAGAAACTAAAGTTGGAGTGGCAGAACGTCGCCCACCTTTTTTGTCAGCAGGGTGGAGACGTGGATGGGGGTGGGCTGGGAGAGGAGGAACCGGGACTCTCCTGCTCCTGGAAAAGAGGTGCCCTACTTTGTCCTCAGAAGGTGCAAGAATCACGGAATGTCTTTTTTCTTTTCATCTTCCTGTCCTTAAATTTCCTGAATTGTTTCACCTCATTCTGAGTCAGGTAGAGAAAAGAGTTAGGTCTTTTGCTCTAGTGTTTATTATTTCACTTCGTTTAAAATTTTATGTCCTCGTAGGGTGCCTTATATATTTGTCAAACAGCACTGTAAATAGGTAACGCAAAATATGGCAGAGGCTTCTTTAGGAACCCAGCCAGTCTCAGGCACTCCCTTTGTCTGGCTCTCCCTCCTTTGTCTATGGGGTATAAAGTCCACCCTAGGCTCTGTCCCCTCAACTCTTTGCTCGCACAGTACTCCTGCTAAGTACTCTCAGAATGGGGGAGGAAGGCACAGTTCAATTCTGGGGGAGGGGTAGGGGGGTTGGTGACAAAGTGAAGATGGTTCTGGCTGAGGGGAGTTATACCTAAAAGTCCCGCGCGCCACCAAACTCGTTTCCAGCAAAGAGCTCCTGTCAAGCCAGCGAGCGAGGCTGAGAAAACGAGACGGTGGGAGGACCAGCTGGCCAGAGAGGCCTAGAGGGCCGCCGGCTCTTTGGTCACGTGACCCGACCTCGGCGGGGCCTAGGTCTCCCTGGTGCCAGGCCACGTGCGACCGCTGCTTCCCGCGATTGGGTCATTTAGGCCTATTTGAACGGCGTACGGAAGCCGCCGCGGT TCONS_00211913 s 5' 0 TCONS_00211913 s 5' 0 EMBV3_10039 CATCCTCTGGGGCCAGGCCTGATCCTGCACCTTGGGGGCTCTAGCCCCCCTAAAATTAAA Gene GeneID:100336995|LOC100336995:XM_002688938:142_cdna Constitutive 0 NULL GeneID:100336995 7 GENE LOC100336995 NULL high mobility group 20 B-like EMBV3_40651 GGCCTTGGCACTAAGCCCAAAGAAGACAGATCCACAAGAGGTTTGGCCAGGTCTAAGAAG Gene BVT0102_005219 + 0 NULL GK000008.2:104330344-104331799 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226544 TCONS_00226542 TCONS_00226545 1 XLOC_138030 Coding TCONS_00226545 XLOC_138030 Coding Coding BSPRY 8:104307472-104331156 j TSS169360 2763 1 TCONS_00226545_2 301 6 0.883587383355149 2.38448637890447e-09 1.26144076991741e-05 0.000506555722156372 0.00142991035275458 5.19916273361472e-09 2.0601253288466e-10 6.22366194176189e-05 0.000294934482976018 0.000174792028734689 5.08543352713777e-12 4.23499879636167e-11 6.32264398682735e-11 5.17803228462478e-05 8.24564158058193e-05 3.30189359742648e-05 4.29719697850989e-10 2.92457778141501e-10 4.6065691147232e-10 0.00011118498426913 7.28863785072449e-05 1.03143149969749e-10 1.02983605433079e-10 1.43458731407931e-10 3.37342063851616e-10 2.01296649803992e-09 0.00165158625309646 1.52370989590704e-05 7.39611321982142e-06 8.05885117395225e-11 1.16789270467181e-10 NM_001206723.1 BSPRY Bos taurus B-box and SPRY domain containing (BSPRY), mRNA. 0.0 3386 100.00 0.678972131740861 NM_017688.2 BSPRY Homo sapiens B-box and SPRY domain containing (BSPRY), mRNA. 0.0 1355 87.65 0.395222584147666 TCONS_00226545_2 sp|Q5W0U4|BSPRY_HUMAN BSPRY_HUMAN B box and SPRY domain-containing protein; 0.0 559 90.67 0.993355481727575 2 coding 0 0 0 0 0.0199791081093585 0.869057899180764 -0.0167709384009257 0.741857516671852 AGCCTTCCTGGTGAGGTGACTTCTCTTCCCTTTCAGGATTGGTCTGGACTGTACTTGAAGCCGGTTTCACTTAGAACAAGATTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTACCATCACCAAATATGTGGCTGACGTCCTGCCAGGGAAGAACCAGAGAGCAGTGAGCATGGCCAGCGCAGCTCGGGAACTGGTCATCCAGCGGCTGGGTCTGGTGAGGAGTTTGTGCGAGAGCGAGGAGCAGAGGTTGCTGGAACAGGTGCATGGCGAAGAGGAGCGGGCCCACCAGAGTATCCTGACGCAGCGAGTACACTGGGCCGAGGCGCTGCAGAAGCTGGACACCATCCGCGCCAGCCTGGTGGACATGCTCACTCATCTGGATGACCTCCAGTTGATTCAGAAGGAGCAGGAGATTTTTGAGAGGACCGAGGAAGCAGAGGGCATTTTGGATCCCAAGGAGTCGGAAAAGTTAAACTTTAATGAGAAGTGCACTCGGAGTCCATTACTGACCCAACTCTGGGCAACAGCCATTCTCGGATCCCTCTCAGGCACAGAGGACGTGCGTATGGATGAGAGAACGGTCAGCCCCTTCTTGCAACTATCAGATGATCGGAGGACCCTGACCTTCAATGCCAAGAAGTCCAAGGCCTGTGCAGATGGCCCAGAGCGCTTTGACCACTGGCCCAATGCCCTGGCCGACACGTCTTTCCAGGCTGGGCTGCACGCCTGGATGGTAAACGTCCAGAACAGTTGTGCGTACAAGGTGGGCGTGGCCTTAGGCCAGCTGCCCCGCAAGGGTTCTGGCAGTGACTCTCGTCTGGGCTGCAATGCCTTCTCCTGGGTCTTCTCCCGCTATGGCCAGGACTTCCGTTTCTCACACGACGGGCAGCATGAGCCCCTGGCACTGCTGCGTTGCCCAGCTCAGCTGGGGGTGCTGCTGGACTTGCAGGCACAGGAGCTACTGTTCTACGAGCCTGCCTCGGGGACCGTGCTCCACATCCACCATGCGTCTTTCCCTGGGCCCCTCTTCCCGGTCTTTGCTGTGGCTGACCAGACCATTTCCATCGTCCACTGACCTGCAGCTACTGGGAGGCCAGGTGTCCCTCCCCACCACCCTTTCAGGCCACGTTTCTACCCAGTGTCTTCTTCCCAAATGCTGCCTGGGCCCCATGAGCAGCTTTAGTGGGGAATATGGGTCCAACCATTAAATGCTGGGTATCTGGGGGAATCCACTACTCCCTGAGGCTTGGTTTCCCAAATCTACCGTCCATCTGCTCCTCTGAGGGTGTCTCATTTGCCCCTTTAGCACTGGCATCCAGCATGGTGCCTGGTGCAGAGTGAGCATGTGATAAACGTGATCAGTGAGTGGACATATGGACTGATGGATGGATGGCTCGGTGGATGTATGGAGGGACAAGTGACCGGATGCATGTTGTAGGCTCTTCTGGAGAACTCCTACCCCCAGGAGACCCCGTCCTCTGGCAGAAAATCTTACGGCTGAAGCTCTTTCATTCCCTCTATTCGGTGCTTCTCCATCCTTTTCATGACATGACACAGAGAAAATATTTTTCTAGCACACAAGGACAACCTGGAAGGGATTTAGAACTCCTGCCAGGTTGCTGTTGGCCAGAGGACTCTGGCCTCTGTCCTCCCCCAGGTTTTACCTAGATACTTGGGAGACTCAGGGGATCCTGTCTCCAGGTAGCCTGCCTGCAACACACCCATCGGAAACACTGCCTGACTAGGCAGAGCTCCAGCCAGTGCCCACCTGTGGTCACAGGGACGAACTTCTTTCCCAACTGTAGCTGTACATGCCATCACCTAATGCCTTCTCTAATACAGTGAGACCAGGGTGAGGCCTTCAAACCAGAAAGAGCCAAGGGAATAAGAGGGCCAGCCTTAGAGAACATGTACATTATTAAAGACTTTAAAACACTGAAAAATTTATTCTGTCTTCTTTGTTGGTAATTGGCCAAATCCCCCAGGTGCCAGCTCATATCTAGTGTTGTGTTTGCTGGGAAATGAATGTCTTCACCCCCTATCCACGCTCCCAGATCCAAGCAGGAGCTCAGCACACACAGCTGAAAGGGCCTGGGACAGGGTTCTGGGCCCTGCATTGCTGAGACCATGGTCAAGTCCCTTCCTTCCTCTGAGGAGGTCACTGAGAACAGTGGTCCTCCATTTTGTTTCACCTGCGAACACCGTCCCAAGGCAGTCTTACCTGCAACTTACCTGTAAGGCTCTTGGGCTCAAAGATGGAGGATAGGGCCTTCCCCACTCTGAAGTTCCTTCAGTAATTTACTAACACTGGGTGGGTCAAACCAACTTTTTCGGTTGACATGACTTCTGAGGCCCTTGCAGCTCTGAAACTACAGCTCATGACCTTTGAGTCCTCACTGCTTGACAACTGGAAATTAATGTTTAGTCACCTGGCCTTGGCACTAAGCCCAAAGAAGACAGATCCACAAGAGGTTTGGCCAAGTCTAAGAAGAGCTTCCTGTTTTTGCCTGAGCACAGACTCACTTAAAACCTAGGTCAAAGCCATTTCTTCTACGCGGCACCTAAAGGTCTTCATGCTATTCTCCCCTCCCCCAGCTACCAATCTACCTTCCCACAGCAGCCTTGGGTCCACAGTTCATGGGCCTGCTCCCAAGAGTGCCCCTCTTATCTGTCTGCCCATCTGTGGGCCACTCCCAGTTCAGGGTCAACTCCAGAGCTCTCCCCAGCTACTGGCACGAGGACATAGCCTGTGTCTG EMBV3_21514 AATCACCTGCGCAGCAGCCCCGAGGACAAGCCAGCACATACCTCCGTGTGCCTCCAACTC Variant GeneID:509613|EIF4EBP1:NM_001077893:47_cdna 332^551 1 EMBV3_37706 GeneID:509613 27 GENE EIF4EBP1 NULL eukaryotic translation initiation factor 4E binding protein 1 EMBV3_15943 CCTTTGAAAGGCCTTTTGCCATATGATAAGCACAAGCAGCGCTGCCCTGTGCTGGAGGAC Variant GeneID:513610|MED23:XM_002690223:16_cdna 114^227 1 EMBV3_22197 GeneID:513610 9 GENE MED23 NULL mediator complex subunit 23 EMBV3_28596 CTTTAAAAGGGGTAGGGTTTCTCACCCCGGGAAGCAATAGCCATAATGTGCTCCCAGTTG Gene GeneID:522382|CNNM4:XM_002691164:222_cdna Constitutive 0 NULL GeneID:522382 11 GENE CNNM4 NULL cyclin M4 EMBV3_06347 AGTCACTAAGTCGTATCAGATTCTTTGCAACCCCGTGAACTGTAGCACGCCAAGCTTCCC Gene BVV0102_133427 + 0 NULL GK000006.2:108018621-108024780 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210731 1 XLOC_129241 NonCoding TCONS_00210731 XLOC_129241 NonCoding NonCoding - 6:108020873-108021475 - TSS158238 602 1 TCONS_00210731_1 53 0.624584717607973 1 0 0 0 0 0 0 0 0 0 0 0.000608289282051182 0 0 0 0 0 0.000877459150293636 0 0 0 1.99098267979084e-06 0 0 0.0006705285583266 0 0 0 0 0 0 0 XM_005198905.1 LOC507825 PREDICTED: Bos taurus uncharacterized LOC507825 (LOC507825), 4e-29 132 93.33 0.146179401993355 0 noncoding 0 0 0 0 -0.158328606716728 0.264060495482862 -0.0320819447185178 0.56474342795625 CTGGAAAATCCCATGAACGGAGGAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAAGAGTCAGACACGACTGAGCAACTTGACTCACTCATTGGACGTGAGCTTGAGTGAGTTAACACAATTCCGAGTGTTAATAAGGATGTGGAACCACAGATCTTTTACCGCAGAATTCATGGGAAACAGTGGAAGGCCCTGAGCAAACTCTGGGAGATAGTGAAGGGCGGGGAAGCTTGGCGTGCTACAGTTCACGGGGTTGCAAAGAATCTGATACGACTTAGTGACTAAACAATTACTGATGAGGCTGAGCACATTTTCACATATTTATTAGCCATTTTGATTTTGTCTCCTGTGAAGTGTCTATTCAACTCTCCTGCCCATTTTCCTGTTTGTCTTTTTCTATTCATCTATAATAATTCTTTATATAGCCTCGATACTGTCAGTAACATGTGTCATGTATATCTTTCCAACTCTATAATTGTTTTTTGGACGGAGCACGGGGTAAGGATTCACTTTCCTGCCTCCCCACAGAGTGCTTCCCCACCTTTCCCTGCGTTGTTTACGTATAGTCTGTCCCTTCCCCACGCATCTGCAAACCCCTCACCA TCONS_00206171 TCONS_00206172 . 5' 2253 TCONS_00206171 TCONS_00206172 . 5' 2253 EMBV3_40075 CAGCTTGGGAGCTCTCTGTTCCAAGCCTGAGGATTTTTGAACCCCTCTCTTCAAGGTGAT Gene GeneID:505130|UBR7:NM_001082601:163_cdna UTR3_Alt 2 NULL GeneID:505130 21 GENE UBR7 C21H14ORF130 MGC155078 ubiquitin protein ligase E3 component n-recognin 7 (putative) EMBV3_35505 CTAGGAAGGCAGGTTCTTCCTGGGGCTAGTACAAAGTTATAAGAGAAACTTCCAGATGGC Gene BVV0101_077325 + 0 NULL GK000003.2:81877231-82250290 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20969 CAGGCTCCCTTTCCTGAATGAGGGCACCGAAGATACCGGCATGGGCATCGCTGGAAGTGA Gene BVV0102_067558 + 0 NULL GK000021.2:21557693-21612426 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123023 1 XLOC_074577 NonCoding TCONS_00123023 XLOC_074577 NonCoding NonCoding - 21:21589101-21589854 - TSS91782 753 1 TCONS_00123023_1 109 1 0 0.00211403233917518 0.000827361190206083 0.00223669254795444 0.000771966351481752 0.00096383234885153 0.000446538331967981 0.000309785701338198 0.000227791342520871 0.00026195740100209 0.000196708950013393 9.12024685134252e-06 4.74858057056708e-06 7.62095290627327e-05 3.74820616140498e-05 1.9546589716994e-05 0.000561202418349547 4.40963067360672e-05 0.00019992764522466 0.000419018726693275 0.000296061694197678 0.000153197107174593 0.000295643724792029 0 0.000133582874960826 0.000487661790103911 0.000177774149716903 0.000334586984031471 0.000382676531618725 1.93410485359712e-05 7.98439237248572e-06 NM_018670.3 MESP1 Homo sapiens mesoderm posterior 1 homolog (mouse) (MESP1), mRNA. 1e-60 237 79.67 0.399734395750332 0 noncoding CAGTGAGCCCTCGGAGCCGGCTTCCTGTCAGACCCTAGAAAGAGCGGAGCAGGCAAAACCCAACCAGGGCCGAGAGCTCAGATTCTGGAAGTCATACCTGGGTTTGAGTGCTGATCCTTGGTTTATCCTTCTGCAAAATAACTACTTAGGAATAAAATGTGTAAAGACCCGGTGCACAGTAAGTATGCACTAATGGAAACGCATTTTCTACAGAGATACTTGGTTTTATCCAGGTTCAAAGAAAAGGTGGACAGACTCAGCTTGCGGCCGCTTTCCTCAAATGAAGCCCCGCCCCCTTCAGGTGGGCCCATCGGGAATAACGGGGTGCTAAGACGGGGCTGGGGGCAAGGAGGAAGGGGTCTGAGGCTGTGTACTTCGGGGACTCCCAAATCCCTGACGTCCTTTGGAGGAGGGGAGGGAAGCTTTGTGACCCTGTGGAGGAAGAACTTGCCAACTGACACCAGCACAGAGTTTATTCACAAATAAATAAATACATACTAGGCAGAGCTCCTGCCTGTCTCCCAAGTGTCTACCCTCTGAGCCCCTCCATCGCGGGAGGGGTTGCGGAAGTCCGTCCTAGGTGGGGACCGGCTCTCACTTCCAGCGATGCCCATGCCGGTATCTTCGGTGCCCTCTTTCAGGAAAGGGAGTCTGGAGAGGAAGCGCTTCGAAGGCGCGGAGGCCAAAAAGGCGTCGGTGCTCACAGAACTGGGCGCCCAGATGTCCGCCGTCACTTCAACTTCTCAGGCCGNN TCONS_00118792 TCONS_00118793 . 3' 6060 TCONS_00118792 TCONS_00118793 . 3' 6812 EMBV3_34737 CTACAGCGTGTGTGTGGTGGAGGTGAAGGTCTCAGACACCCGGCGCATAGGAATCATCAT Gene GeneID:520493|VSIG8:XM_002685872:21_cdna Constitutive 0 NULL GeneID:520493 3 GENE VSIG8 NULL V-set and immunoglobulin domain containing 8 EMBV3_37006 GGGACCACATCCTGATAAAGCGGATAGCAGGCACCACTAATGAAGAGATGCTTATGGGAG Gene BVV0102_301809 + 0 NULL GK000005.2:32606145-32635939 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13530 GAGGAGCCCGAGGGGGCGCGGGCTCAGCGTAGACTCTGCATTGGAAGACATGGATCTTGC Variant GeneID:618886|LOC618886:XM_002697208:99_cdna 86^388 1 EMBV3_33672 GeneID:618886 23 GENE LOC618886 NULL similar to cDNA sequence BC004004 EMBV3_20853 CTGCAGATGAGTTGTTGGAGAAGGGTAGCTGAGAGAGGAGGGTGGGTCATCTCCCATCTT Gene GeneID:540002|CHPF:XM_002685584:187_cdna Constitutive 0 NULL GeneID:540002 2 GENE CHPF NULL chondroitin polymerizing factor EMBV3_31753 CTTGGCACCAGGAAGAGCTTTTGGAAGGAATAGAGTACAATGGTGGAGACTGTTATTGTG Gene BVT0102_313217 + 1 EMBV3_33881 GK000003.2:6659068-6672011 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171806 1 XLOC_103919 Coding TCONS_00171806 XLOC_103919 Coding Coding DDR2 3:6665973-6847222 j TSS128079 7831 1 TCONS_00171806_9 855 0.0937300472481165 19 0.956898834745763 0.000315598930484936 0.000420404271497366 0.000182148218566853 0.000155506138069112 0.000301174973718394 0.000128977258051328 0.000111549225706768 0.000207130550129217 0.000253453123873343 2.61869333242177e-05 6.77350930096694e-07 4.39380220508447e-06 4.02996402836813e-05 4.40499511153681e-06 8.53867372059622e-05 3.79366655885658e-05 4.6233963246098e-05 0 0.000383876499597546 0.000217467229045668 7.45748833481111e-05 2.27424340944459e-05 4.97368106322013e-06 3.50057713423148e-05 0.000253549931914492 0.00062237653076359 0.000266539333237515 1.22655862534502e-06 2.25317986033309e-06 3.29676478773815e-05 XM_005203519.1 DDR2 PREDICTED: Bos taurus discoidin domain receptor tyrosine kinase 2 (DDR2), transcript variant X2, mRNA. 0.0 5777 100.00 0.408887753799004 NM_006182.2 DDR2 Homo sapiens discoidin domain receptor tyrosine kinase 2 (DDR2), 0.0 3957 91.76 0.352317711658792 TCONS_00171806_9 sp|Q16832|DDR2_HUMAN DDR2_HUMAN Discoidin domain-containing receptor 2; 0.0 1697 97.43 0.998830409356725 3 coding 0 0 0 0 0.00570183651585079 0.967449519185839 0.0163973955439589 0.787681958107141 AGAGATGGAGAAGCCTGAGCAGAGAGCTAAGTTTTTGGCACTTACTAGTGGTGTTGGAGGGTCCTGAGTTTGGGAGAGGACAGCTTTTAGTACTTCTGGTTTTTCAGGGGAGTTGCAGACTTAATGGTGAGAAGGACATCTTCGGGAGATCCACAACTGGTCCGGGGTTCAATGCTCTAGAAAGTTCTAAGGCTGTGACTTGAAGCCAAGAAGCTGAAATAATTCAAAAGAAGCAGAGGCCAGCAATTCCTGAGGATCCTGTCCCTCGGAGAATGCTCTGCACCCATTGATGCTCCAGTTCCAACACCATCTCCTGAGATGATCCCGATTCCCAGAATGCCCTTGGTGCTGCTCCTGCTGCTGCCTATCTTGAGTTCTGCAAAAGCTCAGGTTAACCCAGCTGTATGCCGCTACCCTCTGGGCATGTCAGGAGGCCACATTCCCGACGAGGACATCACAGCCTCCAGTCAGTGGTCAGAGTCCACTGCTGCCAGATATGGAAGGCTGGACTCGGAAGAAGGGGATGGAGCCTGGTGTCCTGAGATTCCAGTGGAACCTGATGACCTGAAGGAGTTTCTGCAGATTGACTTGCACACCCTGCACTTTATCACTCTGGTGGGGACCCAGGGACGCCATGCAGGGGGCCATGGCATTGAGTTTGCCCCCATGTACAAGATCAACTACAGTCGAGATGGCACTCGCTGGATCTCTTGGAGGAACCGGCATGGGAAACAGGTGCTGGATGGAAATAGTAACCCCTATGACATTTTCCTAAAGGATTTGGAGCCACCCATTGTGGCCAGATTTGTCCGCTTTATCCCAGTAACTGATCACTCCATGAATGTGTGCATGAGGGTGGAGCTTTACGGATGTGTCTGGCTGGATGGCTTGGTGTCTTACAGCGCTCCAGCTGGACAGCAGTTTGTACTGCCGGGAGGCTCCATCATTTATCTCAACGATTCTGTCTATGATGGAGCTGTTGGGTACAGCATGACTGAAGGGCTGGGCCAGTTGACTGATGGGGTGTCTGGCCTGGATGATTTCACGCAGACCCACGAGTACCATGTGTGGCCGGGCTATGACTATGTGGGCTGGAGAAACGAGAGTGCCACCAATGGTTACATCGAGATCATGTTTGAGTTTGACCGCATCAGGAATTTTACTACTATGAAGGTCCACTGCAACAACATGTTTGCTAAGGGTGTGAAGATTTTTAAGGAGGTCCAGTGCTACTTCCGCTCTGAAGCCAATGAATGGGAACCTAACGCCGTCTCCTTCCCGCTGGTGCTGGATGACGTCAACCCCAGTGCTCGCTTCGTCACTGTGCCCCTCCACCACCGCATGGCCAGTGCCATCAAGTGCCAATACCATTTTGCTGACACCTGGATGATGTTCAGTGAGATCACCTTCCAATCAGATGCTGCAATGTACAACAACTCCGGAGCCCTGCCCACCTCGCCTGTGGCCCCCACAACCTATGATCCAATGCTTAAAGTTGATGACAGCAATACTCGAATCCTGATTGGCTGCTTGGTAGCCATCATCTTCATTCTCTTGGCCATCATTGTCATCATCCTTTGGAGGCAGTTCTGGCAGAAAATGCTGGAGAAGGCTTCCCGGAGGATGCTGGATGATGAAATGACAGTCAGCCTTTCCCTGCCCAGCGAATCCAGCATGTTCAACAATAACCGCTCCTCATCACCAAGTGAGCAAGAGTCCAACTCCACTTATGATCGCATCTTTCCACTCCGCCCTGACTACCAGGAGCCATCCAGGCTGATACGAAAACTTCCAGAATTTGCTCCAGGGGAGGAAGAGTCAGGCTGCAGTGGCGTTGTGAAGCCAGTCCAGCCCAGTGGGCCCGAGGGTGTGCCCCACTACGCAGAGGCTGACATTGTGAACCTCCAGGGGGTGACTGGAGGAAACACCTACTCTGTGCCTGCCGTTACCATGGACCTGCTCTCCGGAAAAGATGTGGCTGTGGAAGAGTTCCCCAGAAAGCTCTTAACATTCAAGGAGAAGCTGGGTGAAGGCCAGTTTGGGGAGGTTCATCTCTGTGAAGTGGAGGGAATGGAAAAGTTCAAAGACAAAGATTTTGCCCTAGATGTCAGTGCCAACCAGCCTGTCCTGGTGGCTGTGAAAATGCTCCGAGCAGATGCCAACAAGAATGCCAGGAATGATTTTCTCAAGGAGATAAAGATCATGTCCCGGCTCAAGGACCCAAACATCATCCGTCTCTTAGCTGTGTGCATCACTGAGGATCCTCTTTGCATGATCACTGAGTACATGGAAAATGGAGATCTCAATCAGTTTCTTTCCCGCCACGAGCCACCCAATTCTTCCTCTGCCAGTGTACCCACTGTCAGTTATGCCAACCTGAAGTTTATGGCTACCCAGATTGCATCTGGTATGAAGTACCTTTCCTCACTTAATTTTGTTCATCGAGATCTGGCCACACGAAACTGCTTAGTGGGTAAGAACTATACCATCAAGATAGCTGATTTTGGAATGAGCAGAAACCTATACAGTGGTGACTACTACCGAATCCAGGGCCGGGCAGTGCTCCCGATCCGCTGGATGTCCTGGGAGAGCATCTTGCTGGGCAAATTCACCACAGCAAGTGATGTGTGGGCCTTCGGGGTGACTCTGTGGGAGACTTTCACCTTTTGCCAGGAACAGCCCTATTCCCAACTGTCAGATGAACAGGTCATTGAGAATACTGGAGAGTTCTTCCGAGACCAAGGGAGGCAGACTTACCTCCCTCAGCCTGCCATTTGCCCTGACTCTGTGTATAAGCTGATGCTCAGCTGCTGGAGAAGAGACACCAAGCACCGGCCCTCTTTCCAGGAAATCCACCTTCTGCTTCTTCAGCAGGTGGACGACTGATGCTGTCAGAGCCTGGCAACAGGAGTTCTTGAGAGGAGCAGGTTGAGTGTGGAAGAGTCATCTGCTGCTACTGCTTGGGATTCACACTCTTGCCTTGGAGATGGTATGACCAGCAGAAAAAGAAAGCTTGAGGCTCTGGCTTCAGAATCCATGGATACTGATAACACTGTTAAATAAAAGTCCCCTCAGAACAGATTCTGAGCTTTCACACTCCACAGATCCTCAGATTCAGTAGGAAACAGGAATGAGATGGTCTTGAAGTCTCTTCCAGTTCTGATGTATTCAGACCTCAGTGGATAATTGAATCTACAATTGCTGCAGACTCAGTTGTCCAGTCATCTCCTGCTCTGAAAATTGTGGTCAGCAAAAGAGATCACGTGAAGAAGTCACGATAATAGTAGTAATAGGAACGCCTGCCACTGGCTCAGTGCTTTAAAGTTTATCATGTGTTTCTACATACTTTATCTCATTTGGTATCTGCAGGGCCAGACATGTTCTCATGTTCTTTTATACTTGGGACCTGCCACACACTCTGTCTTCTCAAGATCAGTAATAACTTCGTGTATTATTCATAGTTCCCCAGAGAAACAGAACTTTATATATATATATATATATATATATATATATGATTTATTATAACGAACTGGGGAATTGGGTTACATAATTATGGAGACTGAGGAGTTCCACAAAGCTGGTGGTGATGTACTTCTGAGAACCAGAAGGTCAAAGTTTTAAGTCCCAGTTGAGAGCAGAAGACTGATGTGTGAGCTCCAGTAGTCAGGCAGAGAGGGTAAATACCCCCTTACTTTTTTTCTTCTATTTAGGCCTTCATTGGAGTGGATGATGCCCACCCATGCTGGAGAGGGCAATCTGCCTTAGCTCACCAATGAAAATATTAATCTCACCTGGAAATACCCTTATAGAAAAACACCCAGAAATAATGTTTAATCTGGGTGCCACATGTCTCAGTCAAGTTGATGTATTAAAGTTAATCTTTCCATTTCAATAGAATCAAAGGGACTTGAAATCAGGGCCTGCAACTTGTTCTCCTTGATCCATGAACATCTGGCAGGGCTACATTCAGACCAGGCCATGACTTCCCATGTGGCAAGAGGAAATATGTATGTTCTCTTTCCTTTGTCTAATATCTTTCTACTTATTTCTTTTTACAATTCTGCCTCAAGCCACTGCATTGCATGATACCATAAAAAAAAAAATCATGTTTAAAATTAACTTAGTATGTCTAGATTTTCCTGGCCTTGAGTCATAGAGGTGATCTGTTTCAAGCAACTGGCAAATATATATTGTCATGTACAGTTATCTTTTTCTGAGATGAGGAAGATTCCATCTTCTGGCACTAAGACTTTTGTACTACAGACACAGTTTTAACTTCTCCCTTAGTCATACACGTTGAGTTCAGCAGCAGAAATCTAAGACAGCCATCCGGGTAAATGATCAAGGCTTAGAATCTAGAATTTAAAAGTAGGTGGACTTTTAAAAAAGAATGAAGAACTTTTAAAGAATAGACGAATGAAGCTAGGAATTATGTAGAAAAGGAGGTAGGAAAAGGGATGAGAAACTGTGGGGCCTTGTTACCTTTCTAGGAAGTCATCCTCTTCATGATATATGTGAAATGTTTTATGTCCAGCTTGTGGTTTGGGGTAGTAGATTTAAGTTTATACTTTTGCTAGTGAATGTGGTGATAGCTAGGTCCAAATCTTGATGAGCTGTCCAGACACATATGTGCTAAGAAAAGATCTGGAGCCTAAAGAGGCACCCAAGGGGAAATGCGATTTTAATGCTATGGAAACACCACTCGCAAGTGTACAAGACTGTATAGCAAAGGGCACCATATGAACGTGGAGCAATGAATGTGCATGTGACTGGATGGGGAGGCAGCTGCGGTTTAGAAAGGAGGCTGCATAATAAGGGGTGATAGAGAGAAGGATGGGGGAGGTAAGGGCAGCAAGACAGACACAGATGGTGCTGCTGAGAATCCATTCTGAAGCATGAAAGCCAATCTCTGAGGAGAACAGAAAAAGTAAGTGTCTTGAAGATAAAAGATAAATGTGTAAGGAGAGAGGGGAAATTCTGGATGATAGAGATGATTAAAAGTAGTCATTAAAAAATGAAAAGTGAGGTGCAGAGTATGACGTGGAAGGGAGCTTTTCAGAGTTTTAAGAAAAGATAAACCCATCAAGAATATAAAAACACATAAGCAACCACCAGGGAATGACCTTTTCATCTCATGGGATATAGGAGAGGGAGGCAGTTTGAACAGGGGTGTTCTAGACCACCTCCAGTGGCAGGGATCACATGGTGGTGAAAAGAGCTCAACTCTGTCTGAGCTGGACTTGGCTTTCCAAGTGCTGCTTTGGAAATGAAGACCAAGAGAGGAGTCGGGGAATTCATGTTAGCTCACCAGGCTCTGTCTTCCCCTCTTTGTTCATGTCACTGAAATCCACTTTAGATAATCCTCATCATTGTTGTGCCCAGAGCGGCCACAGGGAAACACTGGGACAACAGGCTTAGGTTAAACTAGATGAAATCTTGTTTGATATTGCACCAAGAGGTACATGCTATGTTGGAACCATGTATTTTTCTAGTATGATCCAGGCATCCCACAAGAAAGCCATGATGTGGGGCTAAGCCATTTGTTTAAAATAAAGGAGAACAGAAGAAAGGAAAGCGGTGAAGATGTTCCAAGGAAATAGTGTAAAACAGAATAACATCTGTTTTGTCCAAAGCTACAAAAATAAACGGAGAAAATCACAGTTAAGTCTTAGAGTACTCCCAATACAGAGCTATTAAGTCTTTGATCCTAAACTGAGTTTGTAGACCTGGAATTTGCCATCTTGCTCTTTTCAGTGAGATCTCTGATATCTGGCCGTGCTTATGATAGGTTTCTGAAAGATGTAGACCCAAATCTAGGCTGAATTTCCTTCTGAATTAAAATTTAACATTTTTATAGAAACAGATGAATGTCTTTTCCACTTGGTAAATGTCTTAGAATGCTAAATTGAGATAAAAAGAGACTGGAATGGTTAAAGGTTTTTAGATTTCTGGCATTTTGAATTCTCTGCTGCCATTAACTGCATTCCTTGGTAGCAAACATATGGAGGGTAATTGTTTGGTTTACGTATCTTTTTTTCCCCCCAGCTGTTATATTGAAATACTTTAAGACTCACAGGAAGTTGTGAAAATAGTTCAGAGTGGCCATTACCTAATAGCAGGATTTCCCATTGACAACATCTTATGTAATCATAGTCCAGTTTCAAAACCAGAAAATTGACATTGGCATAATACTAGTAACTAAACTACAGACCTTACTCAGATTTCACCAGTTGTTCACATGTATACATTTAGTTTCTGGATGCTTTTAACCCTTGCTGATTTGTAACCTGGTCTTGTTTGGCTGCATCACGAAAGACATTATTGGGATACAATTCTGTCAAATCCTAAAGAGGATATAACAAATTAACCTGTTCCTTTATCCAAAGTAATATCCTGCCTAGACTGTATCCATATTTTCTGACGAGTTCGGCTGTTCAGCATCTGAAACAATCCAAAAACAGCTTAGAAAAATCAGATAACACAAAGGACAGTAAGACCCACAGCTCACTAGCTAGGTATAGAAGGAAATTATAGATGGTTTCTGCAGTTCTTTCAAGTAGGACTTATATGGTGGCAAGGAGAGGACTTTAGAATAAATCAGTATTTTGATTAAGAACTAGGTGGCATTTCATTCTTGGCACCAGGAAGAGCTTTTGGAAGGAATAGAGTACAATGGTGGAGACTGTTATTGTGTGGTAAAACACTACTCTCGGAATATTAGAGAAGTTTCATTTACCTAAATGTCTATTCTTAAATGGAATAACAACCACATTGGACTAAATTAAGTACAGGTACAGCAGCAACCAGGCCCAGAGGTTCAGGAAGATAGGGGAGTCGAAGCTTTAGTTTTGTGGATTACAGTTTTGAGTTCTGTAATGGCATTTTTAAGCTGCCCTGTTTAAGGGTCACGAGATTATACCTGAGTTCACCTCTGCATACCCCACATCCTATAAAGTTCCTAACACATAGTGAGCACATCATAAATATTTGCTGAATTTTTTTTTGAATGAATAAAAGGTAGAAGCAGAAACTTGTCAACTGGCATAACTAGGGTGAATTTAGGTAGAATTGCTTTGCTGTAATGTAGAGGGTTTATTTTCAAATGAGGAAAGAGGAAAATGTGCCCAAACTTGTACATCCTCCATTTATATGTTTACTGATGTTGAAACTGATCTATGTAAATGTCTTATTCTTTGAGGTATTCAGACAGAAATGCAAGGTTCTTCTCTGCATGGTACCCCATCAAGAGCAGGTAGAGACTCCAGCCCCAAACCCAGCTCTTTTGGAACAAGATTTTTAGTTTCTCCTGCAAACACCTTGTCAACAACTTCTCAGGCCTCCAAAGGTGAAAGATGGGAGTCCCAGGCTAGCTCGTGCTTACCCACGTTCGCAACTGCATGTAAAGGAAGAATTTGTAAAGAGACTCGAGGGAAAGCACAAAGAGAGAAGGGAATCACTTTTGGTGAAAAACTTTCTTGAAAAGAGGCTTGGAGAGAAGTGCACGTTGATCAGATTACTACAAATGCACCAAGGGTTTGTAACCTAGCCTATTCATCTTATGTCCTTCACTGTTCATGATATCCTAGTCTTCTACCCCATTGTCTGGCAACTTTTTCTGAGGACCGAGTTTCTAAAGCAGTGTGGTGCACTCTTCCTATGAGGAGGAAACATCTGGGCTTTATTCTTCAAGCGTTGGAGGTTGATGTGTCCTGTCAAGGGGTAAAAATAGCAAATTGATTTTATTTCTGCTTAAAACTATCATAGTCATTCCAAAATAGAACGCATAAAAATTCTCTGTATTAGAAAAAGAAATGAGATACCAACTGTATAT EMBV3_06837 CTCTCAGTGGACCCCAAGAAACGACCTACCGCATCTGAGATACTGAAGACTTTGAAGGAG Gene GeneID:347700|EIF2AK2:NM_178109:42_cdna Constitutive 0 NULL GeneID:347700 11 GENE EIF2AK2 PKR PRKR eukaryotic translation initiation factor 2-alpha kinase 2 EMBV3_38298 AAAATTCCAGGGACAGAGGAGCCTGGTAGGCAGAAGTCCATGGGGCTGTGAAGAGTTGGA Gene BVV0101_066610 + 0 NULL GK000008.2:61875343-61927884 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34326 GTCAGAACCACCACACTGACCATCGTAGGGCCGCAATACCTGCTCCTCAAAGCTTCTACG Gene GeneID:618621|LOC618621:XM_002696132:258_cdna Constitutive 0 NULL GeneID:618621 19 GENE LOC618621 NULL similar to Secreted and transmembrane protein 1A EMBV3_34071 CTGTTTGACATCAGGGAGTCCACGTAGGGAAGGAACGCGGCGGATGACAGGTACAGAAAT Gene BVV0102_180441 + 0 NULL GK000018.2:65794001-65826615 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091995 1 XLOC_056763 NonCoding TCONS_00091995 XLOC_056763 NonCoding NonCoding - 18:65798696-65799500 - TSS69341 804 2 TCONS_00091995_2 47 1 0 0 0 0 0 0 0 1.45067464905944e-05 0 0 0.00053222337550547 0.000318891626583438 0.000311315965615374 3.21188266953143e-05 1.75521833625626e-05 2.44089457247285e-05 0.00275941923046722 2.06496049370804e-05 0.000686565790462223 0 0 0 0.00198438288904129 0.000125515681452089 0.000291921426823353 0 0 0 0.000286722020801427 0.000108685396381452 0.000568321983110813 XM_005219795.1 ZNF8 PREDICTED: Bos taurus zinc finger protein 8 (ZNF8), transcript 0.0 789 100.00 0.54228855721393 NM_021089.2 ZNF8 Homo sapiens zinc finger protein 8 (ZNF8), mRNA. 4e-36 156 73.54 0.303482587064677 0 noncoding 0 0 0 0 0.0582882079968587 0.581672328028333 0.0527934275993901 0.321527194836523 GAGAGCCCCGGGGGCGGGACGAAGGCGGGGCCGCCCGCCGGCAGGGCACTGGCGCTGTTTGACCTCCACGAGATCATGCAGGAAAAGAACCCGGTGCGCGTTATTGGGGTGGAAGAGCCCGCCATGAGCACGTCCGTGCTGTTTGACATCAGGGAGTCCACGTAGGGAAGGAACGCGGCGGATGACAGGTACAGAAATGTGGTACGTCCACAAAGTGTATTTCTGGAAGGGGGCTGAGGGTAGAAACGCCCTCAGATTTCCTAAGGCGGTGGTGCTTGCAAACACCTGAGATCACTGATTCTCCTGAGTCTCAAACCCAGTCCTCGCAAATGAATTCAGAGGTAATGGAACCTACACACGTGTGTAATGTTGAGAAACCCATACATGTCCCCGTTTTGTAAAGGATAATTAAAGCAAAAGAAACGGTCAGTAGGTAACGTCGGCTGAGTTGCTGTCTTTCCCTGTGGTGGAGACCATCGTGCCTGGAGACTGGGGGCGTTGCTTATGGCTTGCCATCTGGTGCATGGGGTGTGGTGTTACCCACAGAAACATGAGAGGCCTGTGTGGGTGTGATATCCCAAAGTGGTGACTAAGGCTTGGGAGAGGTTTGCACAAAACAAATGCAGCTGCGTTACTGGAAGGTTTTGTTTAAATTCTAAACATGCAGGAATTAATTTATATGTGGAGTCAACCCAAGTCGCAGTTGATATATTATAGAAAGGAGTTTCAGACATACATCCATGGCCGCTGGGATCCATTTCTGCACTTTAGAGTCATTAGAGCAGGCATGGCAGCCACACTCAT TCONS_00085087 TCONS_00085088 . 3' 4697 TCONS_00085087 TCONS_00085088 . 3' 5500 EMBV3_26142 TGGAGCCATCACCAAGCCTCTCTCTCCCCAAACGGCTGCATCACATCTGAACAATAGACA Gene BVV0102_231162 + 0 NULL GK000014.2:42687351-42984958 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21573 GTCCATGGCGTCGCAAAGTGTCAGACATGACTTGGTGACTGAACAACAATAGCCCCCTTA Gene BVV0102_342218 - 1 EMBV3_14730 GK000005.2:58329306-58370253 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31518 CAGACCACTAGAGGGTGCTGGTTGGTCAGTATAACCATTTCAGGGCAAGATCTGCTGTTT Gene GeneID:506996|USP43:XM_002695882:397_cdna UTR3_Alt 2 NULL GeneID:506996 19 GENE USP43 NULL ubiquitin specific peptidase 43 EMBV3_19395 GGGCCCCAGTTCTTCACATGGCCTGAAGGGTTGCTGATTTTCTTACAGCAAAGGTAGAAC Gene BVV0102_251501 + 1 EMBV3_10341 GK000027.2:35943921-36108536 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155542 1 XLOC_094761 NonCoding TCONS_00155542 XLOC_094761 NonCoding NonCoding LOC100848706 27:35978162-35986883 = TSS116361 1634 4 TCONS_00155542_6 75 0.147490820073439 2 0.812844036697248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.36396081539179e-06 0 0 0 0.00010093716022262 0 1.85785194805524e-06 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0273982989063843 0.813230682074188 0.00378199034245931 0.93493884329267 CAGACGGATGACAGTTGCCAGTTGAGTCTCAGCTGGAGGTCCGTTGGTTAAGGACCGGAACAACTTCATGTGGCTTCTCCATACGGCTTCTCATAGCATGCTGGCTGGGCCACAAGAAGGGATGTCCCAAGAAGGAGTGTCCCGAGAAGCAACTATTCTACGAGACCCAGATGGAGAAGCTGCAAAGTGCTCATGACCTTGCCATAAAAGTCCTTGAAAGTCACTTCCGCCATATCCTACTGTTCGGGTATGATTCTGATTGCTGCAAGACTTCTTCCCCAAAATCAGTTCTACCTTTGCTGTAAGAAAATCAGCAACCCTTCAGGCCATGTGAAGAACTGGGGCCCAGCCCTGAAAGGCATTCTGAAAGCAGAGGATTTCCAGGGAAGCCAAAGGCAAGGCACGATCAGGATACCTTGACAAGCATCCTCTGTGAGCATCCCGTGTATGAGGCTCCAGCGCCAAGGCCAGTGCCAAACCGCAGGGCTGAAGGAGGCAGGCGGGAGATCACAGCACAGCCGCCAACACGCAGATATAGGGTCTGGAGTTGGGGAGGCAGGCGAGGCCAGCCTGTTTCCCTGGGCTCTGGGTCAGCCTTGCCAGGGCTCTCACCTTCCCCCCTTCCCGACCCCCCACCTCTCTGTGGACCGACTCCCCAAACTCCCCAAACACTGACACCAGTGTTTAACCTCTCCCCTCCCCGACCTCCACTGTCTGCTCGGGGAGATAATGGCGACACGGTTGCCCTCTCTCCCAGGCTCTCCCCAGAGGAGAGGGGCCAGAAAGAGCCCCAAGCTGAGTGGGCATCGGGCCGGGCTGTGTCTAATCCCATCTCGGGCCCTGCACAGTTTAGAGGCATCTCCCAAGGAGGCCCAGCCAGTTCTGTCTCTCTGAAACATAATCTTCTCGATTGTTTCATCTTGCTTTTAGATAGCCACAATTTTTCCTTACAACAGCCAGCCAATCCCCTCCCCAGCCCCCAAGCCTGGAAAAGAAAAAAAATATGAATGTACTTGAACGGAGTGATAACCACCCACTGCAGAAAATGCAGGAACAAGACCTAGCCTGTGGGGGGAAAAAAAGGCTTCTACCCAGAAGGAAAATGAAGGGGGCACCCAGAGGAAATAGGTCAAGCTTTGAATCCATGGGTCACGGTCCCTCTGGTGATCCATGTATTTCAGAGACGCTGGGGGACCGGGGGACCTCCAGCCTGAATGCCACGTTTGCTTAGGTGGTCGAGGTTTTGAATTTTTTCTCAGACTCTATCCTATCTAGCCTGGTCTGGCTGTAATCACAAATCTCCAAAAATGGCGATGTGTACCATTTCTCTTGGGTGACTCCATAGAATAAATATTTTACATACAATTTACCCAGAAGCCCCAAAAAGACTTGTTGAAAACAGCCCAAATGCAAATTGACCACCCTTCTGAGAAACAGTGAATTAAAGCTTCTTGGGCTGTGAAGCCAAGTTGCTTAAAAAGCCACAGTGCAAATTCTTAAAGCACACAGCTTCCCTGAACTCAGTATGGAGAAACCGATTTAAACTATTTTTACCCATTCATTGCTGACGCTAATGAAATTTTATGACTTGCTTTATAATTAATTATCTGCTTGTTATTAAAATTCTAACTCAA EMBV3_13917 AACGGTGACAACTCAGTACCGTGACAAGTACACTCGTGTCAGCTTCCCTTGATTCACGTG Gene BVT0102_302722 - 1 EMBV3_03115 GK000009.2:103980955-103988907 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21092 CCCTGGATTCGAGAGCTGGTCCTAGGGTCAGACGCGGAGGCCATGCTGCTTGTATCCGAC Variant GeneID:510353|ACD:XM_002694822:700_cdna 775^864 1 EMBV3_28409 GeneID:510353 18 GENE ACD NULL adrenocortical dysplasia homolog (mouse) EMBV3_43168 ACAGAAGGATTGGGCACCTGTGAAAACTGGGCTGTTATTGATGGCATTTCTTACCATGGC Gene GeneID:510366|NIN:XM_002690835:154_cdna Constitutive 0 NULL GeneID:510366 10 GENE NIN NULL ninein (GSK3B interacting protein) EMBV3_39399 TTCCGGTTCTGTGAGCCCCTTTGGCAAATTAACCAGATCTCAGAGCGATATAGCTGGTCC Gene BVV0102_203052 + 0 NULL GK000001.2:145075460-145104426 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32124 TCCTGCATGGAAACAAGATCTATGTCCTGGGCTCCTGGACCAAGCTGCCCCGCAGCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11877 GTCAAAGGCTATGACAACCTCTTTGCCATGATGTGCAACATGCTGGGCCTCGGCGACATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18580 ACTGTGGCAGCTTTTCTTGTTGCAAAGCACTGGGTCTAGGGTGCACAGGCTTCAGCAGTT Gene BVV0102_042762 + 0 NULL GK000014.2:71535603-71606356 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053825 TCONS_00053826 1 XLOC_031836 NonCoding TCONS_00053825 XLOC_031836 NonCoding NonCoding - 14:71591548-71602678 - TSS39636 2189 3 TCONS_00053825_1 71 0.340794883508451 2 0.803486386917064 0 0 0 0 0 0 2.66409223131645e-06 0 2.99484431398925e-06 0 3.45066115525484e-06 0 0 0 0 0.000666059571095613 0.000104317323789869 0.00154740526242358 0 0 2.77362073801065e-07 0.000124299302178881 0.00053919155738671 0.000165466110933068 0 0 0 6.75825001597418e-12 0.000249494161785555 3.02122767824649e-05 XM_005199626.1 KIAA2018 PREDICTED: Bos taurus KIAA2018 ortholog (KIAA2018), transcript 3e-144 517 88.72 0.181818181818182 0 noncoding 0 0 0 0 0.11282905997993 0.417979527596269 0.0418400162568726 0.400589323191021 GCAGCAGCATCTTTATTCTTACTGGATAAGTCTATGGATTGACTTTATTACCCAGTATAGATACTGTTTTCCTTTGAGTCACCCTTCTCTCATTAAACAGTCCTGCCTTGGTGTTCTGTGTCTTTTCCCTTTTATTTTTAATCACGATTAATCTTCACAGCTGCTTAGTTATATAATAATATCCTGTGTTTAAACACAGGCCTACAGATTGAATTTCTCAGAGAGCAAGTTCAAGATCTTTTTAAAACCACAAGATCTCTTTTATGGGTGCTACAAAGATTCTTTAGGAGCGCAGCATTAATGATTTGAGAAGCTATTTCATCTATTTTACATTTGTTGCTTGTTTCAGTGATTTTTATCCTGTGTTAATCTTGTAAGTGGGCTAATAAGCTGAGAAAGTTTTCATTTAACATACAGACACCTGCTCTATTCCTTTCTTGAAAGCTGTTCAATGTAGTTGTTAAATCTGCTTGAATCTCAGTTTGGAGGAGTGTATAATACTCTCTTTACTGAACGATCATTTTCTAAATTAATGTATTTATTTTCTTCTTATGCAAGTAACCTACATGTGTTCATTACAGAAATCTTGGGGGGTGGAAATAATGCAAAAGCATAAAGGAAAAACATTTTTAAAATCAACTCGAGGGCTCCCCTGCTGTCTCAGTGGTAGAGTCCACCTGCTGATGCAGGAGACAAGGGTTCGATCCCTGATCTGGGCAGATCCCACGTGCTGCAGAGGAACTAAACTGGTATACCACGAGTATTGAGCCTGTGCTCTGGACACCAGGAGCTGCAACTGCTGAGCCCATATGCCACAACTGCTGAAGCCTGTGCACCCTAGACCCAGTGCTTTGCAACAAGAAAAGCTGCCACAGTGAGCAGCCCACACACTGCAACTGGAGAAAGCCCAAGTGGCAGTGAAGATCCAGCACAGCCAAAAACAAATCATAAAATCAATTCTGATTGTACCAGGGTTTTAAGTTGTATTTAATGGGGGCAACATTAAATACAACTTAAAGAAAGCTGAGCACTGAAGAACTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCGCTTGGATTGCAAGGAGATCAAAGCAGTCAGTTCTAAAAGAAATTAGTCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTGATGTGAAGAGCTGACTCATTAGAAAAGACCCTGATGCTGGGAAAGACTGAAGGCAAGAGGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCGATGGACATAAGTTTGAGTAAGCTCCAGGAGTTGGTGAAGGACAGGGAAGCATGGCATGCTGTAGTCCATGGGGTTGCAAAGAGTCAGACACGACTGAGCAGCTGAACTGAACTGAATGGAACAACAGGGAAAAGTACATCTACTCCATCTTCCTGTTAACAGAAGTCAAGATATAAAATATCATGAAATGAAATATCTTATTTTATAAAATAGTTGGCTTCATGTTTTTGGAATTGTACAGAGATTTATTTATTGCAGGTATGTTGACTCCCCCACTAGAACTGTTTCTGGCATATGGTAGGAACTTAAAAATATTCAGTGACTGAATCTCTACTTCAGTGAGAAAGCTTAAGGACTTAAGTAATTTCTTCTTCAACTGGTAACTTCTCAAGTAATTTCTTCTTCAAACACCCAACACAGTTGGGTCGAGTAAAGAGTGTGGTTAAAGAATCAGTGTAATTAAAAATAATGCTGGTGAGAAATTTAGTAAGTTTATTATACTCAGAAGTTAGACAGTGGAACATCTCTCTGCACGATCTGAATTTGGACTGTCTGATTCCAAACCCTGAGCTCTCACACTGGGGCACTCATGAAAGTCAAGGCCCCTTTTGTTCCTTTAGGACAAAGGATGGGTGAGAGGGAGCCCCCACTTGAGACAATGACAAAGTGACAACACAACACTTTCCCACTGAATTAACAGTGTCCTTGCCTTCTTCAGGCAACTGCCCAGTGCTGTCAGCTCCTTCCTTCTGCTCAATGCCAGGCTTCCTGCCTAGTGTCCTAATTACTCCTTGATTCCTGTGCAAATGGGATACCACTCCAATTTCTCTCTTGCAGCTGCATTTTTTTCAGCCCCCCCCCCCAAAAAAACCCAAAAGCAATAGTGCTTTC TCONS_00053827 TCONS_00053828 TCONS_00053829 s 3' 10211 TCONS_00053827 TCONS_00053828 TCONS_00053829 s 3' 298 EMBV3_28225 GACCGAACTTCTGGTAACCACCCCACTTAGTTGATCGTTTGTTGGTTGACACCACCAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25692 TTTCCTCCCACAAGTGCAAGGTGATGTACTACACCGAGGTGATCGGCTCCGAGGACTTCA Gene GeneID:513449|SEC14L1:NM_001101975:389_cdna Constitutive 0 NULL GeneID:513449 19 GENE SEC14L1 MGC179412 SEC14-like 1 (S. cerevisiae) EMBV3_09271 GCTGGGTTCCTGGCCTCTGCACACTGTATGACTTTCCTGATGGGTAATTTTTCTAAGGCC Gene GeneID:535254|POGZ:NM_001163190:130_cdna UTR3_Alt 3 NULL GeneID:535254 3 GENE POGZ NULL pogo transposable element with ZNF domain EMBV3_36082 CTCTACACTGAAGTGTTGATGTGATCTGCTCTGGACCTTTAATCTCTGTATCCTTAAAGC Gene GeneID:783682|MGC152301:NM_001099190:169_cdna Constitutive 0 NULL GeneID:783682 13 GENE MGC152301 NULL hypothetical protein LOC783682 EMBV3_40357 GAACTGGTCATCTTCATTGGAGGGGTCTTGGTCCTTGTTGTGCCCTTGATCTTCATCTTC Gene GeneID:616705|LOC616705:XM_002685940:104_cdna Constitutive 0 NULL GeneID:616705 3 GENE LOC616705 NULL similar to putative olfactory receptor 10R2 EMBV3_40250 TATAGTTAGCCTGCTTACGTCTCTCCTTCCACCGCCGCTCTCATTGAGGTGTGTTCAAGA Gene BVT0102_027096 - 0 NULL GK000013.2:26124783-26229726 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042345 TCONS_00042349 TCONS_00042347 TCONS_00042344 TCONS_00042346 TCONS_00042348 1 XLOC_025647 Coding TCONS_00042345 XLOC_025647 Coding Coding GPR158 13:26226007-26254705 j TSS31545 4714 1 TCONS_00042345_6 302 0.155070004242681 2 0.8358016517406 0.000257181904974916 3.05698311864106e-13 0.000347286735743585 2.27940037512139e-12 0.000383538701809371 5.00039150695637e-13 0.000510269792022563 5.20718558763641e-05 0.000677862334187576 1.01426742920977e-05 1.09396469489547e-19 2.45292077088825e-22 2.18974959369519e-05 2.4617169959809e-05 3.40674616886814e-05 0 0 0 1.73503206161641e-06 0.000196722061036746 1.59771202565423e-46 0 0 0 3.39467909438085e-12 7.7770663090833e-09 3.23715628711837e-40 0 4.53311120582264e-05 0 NM_001206442.1 GPR158 Bos taurus G protein-coupled receptor 158 (GPR158), mRNA. 0.0 1627 100.00 0.191132795927026 NM_001004761.1 Gpr158 Mus musculus G protein-coupled receptor 158 (Gpr158), mRNA. 0.0 1746 84.08 0.333899024183284 TCONS_00042345_6 sp|E1BBQ2|GP158_BOVIN GP158_BOVIN Probable G-protein coupled receptor 158; 0.0 624 100.00 0.993377483443709 0 coding TGCTATTCATGCCAGGATCACTTGATTAACTTACAAAACAACTTTCTGTCTCCATTGTTTGAATTTTTTATATTATATATGAACTTCATCTTAATGCAGTCATCTTTTCCCATTTCTCTTTTCTGCTAAGTTTCTTTTCATCATACCCTCAGCTGGTTCACTACTATCTACTACCTACTTAATTACTCCTCATTTGTTATATCTCATCTCAACTGTTACCTCCTCATAGAAGTCTTTTTTTTCTTTATCTCTTTATATAAGAATATCCTTGACCCCATATCCTTCACTCTTTATAAATTTACAGTATTTATTTCTTCATGGCACTTACAACAATATGTAATTTAAAATTTTGCTTATTATCTCTCTTTAAACACACTTGACTGTGAGGTCCATGTGTCTACCATGCAAATGTTTACCCCATTACTAAGCACAATGTCTGATACATAGTAGAGACTCAATCAACATTTGTTGAATGTGTATGTCTGTGAGTTGGTGTGGCATTCCATAGTCTGCTTAGGGCTATGAGCTTGTGTTGTATCTTGGTCCTTATAAAAAACTTCTTTTGGCTGATCTCCTTCCGTGATGGATAATAACACAGACATAGTGTTGTCTACCTAGTCGGACCAGACCTCCTAGACCATTTGGACCATAGCATCTTATTGTGAGTGAACCTAGGTTTTCTACATCATTCTACACCGTAATGTGCTATCTTCCAGAGCCTGTATTCTGTGGTAGCCTCTGGCCACACGTGGTTATTGAGCACTTGAAATGTAGCTAGTATGAAGTGCCATATGCTGAGAGTGTAAAATATACATTGTATTCTGAGGATTTAGTACAAAAATGTAGACTACCTCATTAATAACTGCTATATTGTTTACTTATTGAAATGAAATTTGGATATACTGGACTAAACAAAATATATTATTACATCTTATTTCACCTTTTTCTTTTAAAATGTGCTATAGGAACATTTAAGATGATATATGTTGATCTTTGACAAGCATTATATTTCTATTGGACAGTGCTATTCTAAACCTAACTAGTTCATCTCTGTTGTTTGGCAATGTAGATGGAAAGTGATCCCCTAAAGGTTATGACAAAATTGCAGGCACCTCTCATAGCTTGCTCCAATCTTGTTAGACATACACTAAGAGAAGGACTAGCACTTCTGGAGAGGGGCTCAGGTGGAATTTTGGGACTCTCTTAATGTCCAAGCATGAGGCTCACATACAACTTATGTTCCAAGACACAGAAACTTTGGTACTTGCCATATATATATTGCTTAAAATAATACTGGGATCAGAACCCAGGTCTTTCAATTACACCGAGTCACTGAATTACTTATAGAGGGACCTATTAATAAAATTATACCTTCCTTTTCAAATGTAATACTAGCAAATTTTAAAGAGCTGTTAATAAATTATATAGGTTTTATAAAAAATCAATTAATGAGGAAATGACACTTCAGTCTTCAAACAGAAAATCATATTGTATATTCTAATAAATTAAACAAACAGAAAATCACATTATTATTGCCATACGCCCTATATCAGAGGATTAAGCTGGATGACCTTTATTTAGCAAAGGAGTATACTTCATATCAAAACAAGTCAGATATGAACATGAACTCTACTTGTGAATAAACACAAATCTAATAACCATTCTCTGCAAAGCTATAAAAGCTCTCTTGGAGACCCAACACTGCAGTTTTAAAAACTGGTTGCTATGTCTTATTCCAAAAGCCATCACCACTGACACATCAGGCACACATCTCTTCTTAGAGGAGACAGATTTAAAAATAATTAGCTTCCTCATCATGATCTTATGGTTCATTCACTAGTTTACCAATTAGCACCAGGCATTCTAAGTGGTCAAGATACTACAGTGACCAATGAAGGCAAACTTTTGCTCTTTGGAGCTTAAATTTTCATCCTTCAATATTTTCTCAATAAGGAGAATGAAATGATAAAGCAAGTCTAAGCCATGCTATCTTAGAATGCCATAGGTGGCTTTTTTAAAAGTTGGGAATTGAAATGATTTTGAGACTTTCTATCTTGTGTCTTTCTTGGGAAATTTGAAAATGGAGGTGTATATAGAAGATGGAGGTGCAGAAGACACTACATATCCAGTACTAAATAGTATTTTTGAATGAAAGTGTCAGAAGACCCGGTTAAAGCTTCAAATAAAACAATTGGACTGTGTTAAGGGAATGTCCAATCATTTTTTTTTTTTTTTGAGTCCTAGCATAGTTATTCTGCTCTTCTTTCTTTAGCTGGGACATCCCAATCTATGGTGAATCAGATGTCTTAGTTCTTGCCTTCATTAATTTCAGGAACTCCCAGTCAGAATGGCTCTCCTTCCCACTCACCACAGACTGACTCATCCTCATTCTCTCACAGTCTGCATCCTGCCCCTATCCTCGCCCTTTGGCACATTCTCTGTTTACATTTCCACAGGTTCCCCTTCATCCCTTTCAAGCAAGCGTTCTTTAGATGGCATTTTCCCCCTTAAAGTTCAGCCAGTAGATGTCTCCATTACTCCCTTACAGCCAAGACCTTGGCAAGTAGGGTTTAATAATTTCTTTAACCGACAACAAGGAGGAGGATTTGATCATTTGCCTAAAATGAGCAGATGCTTGGGAGGACACGTCTTCATCCTACATCCCTCCCTCCGATATATGTCACAAATGAAAACTACTTTTCCTCTCTTTTCCAGGCAAAAGAAAAGACTGATTTAACGAAGCATGCAAGACGCCAACACCCTCCTCCTCAGTACATCCAAGTTTCCTTCTCTCTGAGCCACCCAAGCTCTGCTTCTACCTTTACTCCAGGCCACCCACCCCCAACCCTTCACGCTCTCGAGTCATCAGGGAACTCGAGTGGGTGAAAGGACTGCTGCATCCCGCGCCGCTGCCTCCTCCGTGCCGCCTCGGGTTCAGCACTGGACAGCTCCCGCCCCAGCCGAACAAATGGTACTCGGCTGATTGACAGAGGAGCCGACCAAACAGAGAACAAGACGAATTGAAGCCGCCCTACAAGGGCTGGTTGCGGCCAAGCTGCCTCTTTAAACTGGCTTTCCTCCCGAGAGCAGGGAGAGGCAGGAGTGTGGTTTGTGGCCAAACCTAAAGACTCCAGTTAACCAGCTGCCTAACCCTCTTGGCTCCGGAGAGGCAAACATCTTAAAAGAAACCCTCGCTCTCTGGGACTCGCCCCTGCGCTCGCTGTGCCGGTCTGTGCGCGCGCGCTCCGCGTCTCCGGGCGAAGCGAACGAGGAGGAGCCAGAGCCAGGAGGCGGGAACGACCTGCCACGGGTGAGATGATGGAGCAGCGTCTTCGGTGGCCGCGGCGGCAGCAGCAGCAGCTCTTGAACACACCTCAATGAGAGCGGCGGTGGAAGGAAAGACGTAAGCAGGCTAACTATAGCTGCCGGCTGCAAAAGGGATGTAACCTGTTCGGTTCAAGGCTGCGAGGTGCGTAATCCTGAGCCGACCCATTGTGGAGCGGGAGCAGCCGGCGTTGCCACAGGTGATTTGATTTCCTGTGACGGTAGCTTAGTCAGCCGGGCATATTTCGGAACATCCCTATTTTAAAGTCCTTTTGGACTGGATGCCTGCTGGAGAAGGGGGAAGACCCCTAGCAAAAGTCTTACTGCTGACAGACTGACGACTACAATTTAAAAAGTGACTCCTCCCGTTACCTCCTCTCCGCTCTGCGAGGCAGATGGGAGTCATGGCTTACCCCTTCCTCTTCTGCCTTCTGCTTGTTCATTTCGGATTGGGAGCTATTGGCGCCAGCCGCGAAGCTCCAAGTCGGCCGGATCCCCCTCGAGAGAGGACCCTGAGGGCGAAGCAACACGCCCAGCAGCCGGCTCGAGCCTCTGCCTCAGACCCCTCTGCTCCCTGGAGCCGCTCCACCGACGGCACCATCTTGGCGCAGAAACTCGCCGAGGAGGTGCCCATGGACGTGGCCTCTTACCTCTACACCGGGGACTCCCACAAGCTGAAGCGAGCCAACTGCTCCAGCCGCTACGAGTTGGCGGGCCTGCCGGGGAAGTCGCCTGCCCTAGCCAGTTCCCATCCCTCATTGCACGGGGCGCTGGACACGCTGACACACGCCACCAACTTCCTCAACATGATGCTGCAGAGCAATAAGTCGCGGGAGCAGAACTTGCAGGACGACTTGGAGTGGTACCAAGCGCTGGTGCGGAGCCTCCTAGAGGGTGAACCCAGCATCTCCCGGGCGGCCATCACCTTCAGCACCGAGTCGCTGTCCGCACCCGCCCCGCAGGTCTTCCTCCAGGCCACGCGTGAGGAGAGTCGCATCCTGCTCCAGGACCTGTCCTCCTCAGCACACCACCTGGCCAACGCCACGCTGGAGACCGAGTGGTTCCACGGCCTCCGGCGCAAGTGGAGGACTCACTTACACCGTCGCGGCTCCAATCAGGGGCCACGGGGCCTGGGCCATAGCTGGCGGCGCAGGGACGGGCTGAGCGGGGACAAGAGCCATGTCAAGTGGTCTCCGCCTTATCTGGAGTGCGAGAATGGCAGTTACAAGCCTGGGTGGTTGGTCACTCTCTCCGCTGCTTTCTACGGGTTGCAGCCTAACCTGGTCCCGGAATTCAGAAATTAGGACACAAGAACACACAAGGATCATATGAAGACACAGAGAGATGACAGCCATCTACAAGTCAAGGAGAGAGGCCTCAAAAGAAACCA EMBV3_35824 ACGGGCACAGACTCAGATCCCTTTCCAGCGTTCACTAGCAGTGTGGCCTCCAATAAGTTA Gene BVV0102_401396 + 0 NULL GK000008.2:86318196-86352647 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14899 GAGGCATTTCTGTTCATGGTGTTCCCTGCTGCTCTTTTTCTAGGAAATGCACTTGTGTTC Gene BVT0102_257318 + 0 NULL GK000030.2:131085410-131184674 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00254287 1 XLOC_157221 NonCoding TCONS_00254287 XLOC_157221 NonCoding NonCoding - X:131092426-131093301 - TSS191508 875 1 TCONS_00254287_1 70 0.0845714285714286 1 0 3.10987788654855e-05 0 3.17280201950188e-05 0 0 0 0 0.000108154833820971 0 0 0 0 0 0 0 0 0 0 3.27813364783305e-05 0 0 0 0 0 4.7509550864246e-05 0 0 0 0 0 0 noncoding 0 0 0 0 0.031863346672934 0.828891785068441 -0.00453224299907745 0.925484466045442 CTCACTGACCCTCTGTAGGCCACCACACTCTCATCTGTGAAATAGGATTGTGCGGGAGTGTAAATGAGTTTGCAAAGGACTTACAATAGTGACTAGCACTTAGTAAGTCCTCAGTACACCTGAGTGACAGTTACACGGGACCTTACTCTTTGAATTCTAGTTTCACTTCAGGTAACCTAACAAAAGAAAACCATAAGCAGCAAGTCTGCATGTTCTCCACATGCAGTACATGTCCTGCTGGGTCAGTTTGGGGGTTCATGCTGGGAGTATGTCCAAGAGGTTGACAGACTTTCCAAACATCTCACTGAAGGTCACCAAATGTAAAAAACCACCGATAAGGATGCTAACAAATTCATTTAGACTTTCTACATCCCATAATATTGTGAAAAGAAGTGTGCAAACTCCATTTTCATTACCCAGTGGTTTGTGGTGAAGATTGAAGTGGACTCAAGTAGCAAAAGCACTAAGAGGCTCTGAGAATTCTGACATTCCCTCTCTCTTCACTTTCTGGAAGTGCATTTGGATTTCTTTTCTCAAGTGACCTGGGTGGTGAATAGATTGTCCTAAGAATATGAGGCATTTCTGTTCATGGTGTTCCCTGCTGCTCTTTTTCTAGGAAATGCACTTGTGTTCTAAGAAGATGACTGCGTTCACCTCTGCCCTCAAGCAAGTCATTGAAAAGCTGAGCTAAGGCCAAAGCTTCTCCAGAACAGTTTATAGAGATTCAGATGTATAAGAGACTCAGAAAGTACCAAAGAGTCTTAGAAACAATCGATGGACATGCTGCCCATCTAATGGAATTCACTCCATATGCAGGCATATTTACAGTACAACAATACCTCACCTGACTTCTTAGGAAATGAAAAAACTTACAT TCONS_00245733 . 3' 28513 TCONS_00245733 . 3' 29387 EMBV3_00597 GGAGAGCCTGGTTGTGGCAAGAGCACCCAGGTTCTGCTGGGACAGGCTGCTTCTGCAGGA Variant GeneID:517947|DQX1:NM_001035322:35_cdna 311^504 1 EMBV3_27196 GeneID:517947 11 GENE DQX1 MGC127670 DEAQ box RNA-dependent ATPase 1 EMBV3_03811 CCACTCTCATCACTGATATTGCTGCGGCCCTGCTGGTTTGGGCTTACCTTGAAGAAGATA Gene GeneID:100138311|PIK3AP1:XM_002698411:346_cdna Constitutive 0 NULL GeneID:100138311 26 GENE PIK3AP1 NULL phosphoinositide-3-kinase adaptor protein 1 EMBV3_34208 TCGGCACATGAGTTCCTGTTTCATTACTGTGGGCAGTATCTCCACGCCGCCCGCTGGCAT Gene GeneID:100336599|LOC100336599:XM_002700426:22_cdna Constitutive 0 NULL GeneID:100336599 X GENE LOC100336599 NULL arylsulfatase D-like EMBV3_03664 TGCTGGAAGGAGATACAGAATGCCATGCTAGATTTAAAACTCCTGAGGATGCTCAAGCAG Gene GeneID:505053|LARP7:XM_002688074:100_cdna Constitutive 0 NULL GeneID:505053 6 GENE LARP7 MGC151878 La ribonucleoprotein domain family, member 7 EMBV3_27250 ATGTATCATCAAGCACCCCAACGGGACCCAGGAGACCATCCTCCTGAACCACACCTTCAA Gene GeneID:280976|ACO2:NM_173977:126_cdna Constitutive 0 NULL GeneID:280976 5 GENE ACO2 NULL aconitase 2, mitochondrial EMBV3_39173 TGTTCCACAAACACGGCTGCTTTGCCAAGGTGCCCGGGTGTAACTGGGTTTCTAACCACA Gene BVV0102_259953 - 1 EMBV3_07640 GK000008.2:5644629-5672115 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41570 GAATCTGATCAAAGGTGAGTGTTAGGCCGCGTTGTGCCTATGTGGGCTGGTAGAATGACT Gene GeneID:782535|DMXL2:XM_002690967:351_cdna Constitutive 0 NULL GeneID:782535 10 GENE DMXL2 NULL Dmx-like 2 EMBV3_43106 ACGAGGAGAGGGCAGACACCTACATCCCAGTTCACTACAGGCACCTGCGGCGATGCGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04025 TCCTTGACTTTTTCCCCGGATTCACAGCTCCTTGTCACTGCTTCAGATGATGGCTACATC Gene GeneID:513208|WDR61:NM_001038097:76_cdna Constitutive 0 NULL GeneID:513208 21 GENE WDR61 MGC133735 WD repeat domain 61 EMBV3_19420 GGGCGCCTCGGCTGGTCACCGGACCCTCAGAGCTCTCTTCACCCTCAAGCCATAGAAAAG Variant GeneID:786490|LOC786490:XM_002687764:89_cdna 72^123 2 EMBV3_23554 GeneID:786490 5 GENE LOC786490 NULL similar to epithelial membrane protein 1 EMBV3_01210 ATCGACAAAGCTGCCTTCTGGGTTGGAGAGCCTATGTGAAGAAGAGCTGCTTGTGGGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07480 GAGGGTGTTTTGCCCTTGACGTTTAAGGAGTGAGAAGTTCACTGGGACTTATGTAGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37138 CCAGAACCTGGGCTTCACCCAAATAGCAGTAGCTCCTTATGCCTTCTCTGGCCTGGAGTT Gene GeneID:617449|CLDN9:XM_002697935:604_cdna Constitutive 0 NULL GeneID:617449 25 GENE CLDN9 NULL claudin 9 EMBV3_32470 CCAGCCCCGCCAAGCTGGAGTCCATTGACGAACCCATCTGCGCTGTGGGCCACGGCGTGG Variant GeneID:513454|PDDC1:NM_001046147:275_cdna 252^359 2 EMBV3_27659 GeneID:513454 29 GENE PDDC1 MGC138028 Parkinson disease 7 domain containing 1 EMBV3_07705 GGCTGCATCACTGAGAGTAAGAATCTGGCCTGAACACCCTGAGCGCTATCTGAGCGAAAT Gene BVV0102_284122 + 0 NULL GK000001.2:54680355-54901194 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00165814 TCONS_00115686 TCONS_00020158 TCONS_00197928 TCONS_00231338 TCONS_00250720 TCONS_00010366 TCONS_00222766 TCONS_00129573 TCONS_00209846 TCONS_00012329 TCONS_00230710 TCONS_00056146 TCONS_00031939 TCONS_00107179 TCONS_00089345 TCONS_00070930 TCONS_00039227 TCONS_00063181 TCONS_00009259 TCONS_00111497 TCONS_00209636 TCONS_00222777 TCONS_00000305 TCONS_00124585 TCONS_00251707 TCONS_00130084 TCONS_00037818 TCONS_00064462 TCONS_00039226 TCONS_00178325 TCONS_00233372 TCONS_00012336 TCONS_00153218 TCONS_00010470 TCONS_00122281 TCONS_00140840 TCONS_00012332 TCONS_00085967 TCONS_00039904 TCONS_00199802 TCONS_00178426 TCONS_00020756 TCONS_00238327 TCONS_00179741 TCONS_00157613 TCONS_00088088 TCONS_00040502 TCONS_00059708 TCONS_00135546 TCONS_00115148 TCONS_00170823 TCONS_00116665 TCONS_00072814 TCONS_00142649 TCONS_00122313 TCONS_00011864 TCONS_00251907 TCONS_00199037 TCONS_00122686 TCONS_00157036 TCONS_00152645 TCONS_00022066 62 XLOC_107421 XLOC_100654 XLOC_069855 XLOC_010836 XLOC_119588 XLOC_140827 XLOC_153663 XLOC_005917 XLOC_136073 XLOC_078286 XLOC_128357 XLOC_007841 XLOC_140200 XLOC_033949 XLOC_018184 XLOC_063090 XLOC_054130 XLOC_042707 XLOC_023045 XLOC_037908 XLOC_004815 XLOC_067397 XLOC_128147 XLOC_136084 XLOC_000084 XLOC_076129 XLOC_154648 XLOC_078795 XLOC_021647 XLOC_039186 XLOC_023044 XLOC_108098 XLOC_142854 XLOC_092983 XLOC_006021 XLOC_073836 XLOC_085269 XLOC_052005 XLOC_023721 XLOC_121454 XLOC_108199 XLOC_011431 XLOC_144994 XLOC_109511 XLOC_096068 XLOC_052875 XLOC_024318 XLOC_036490 XLOC_081769 XLOC_069449 XLOC_103665 XLOC_070831 XLOC_044582 XLOC_087074 XLOC_073868 XLOC_007414 XLOC_154848 XLOC_120690 XLOC_074241 XLOC_095496 XLOC_092410 XLOC_012737 Coding TCONS_00070930 XLOC_042707 NonCoding NonCoding - 16:7221865-7222437 - TSS52774 572 1 TCONS_00070930_1 43 0.994755244755245 1 0 4.9554420980599e-06 0 1.05710543005102e-05 1.69373256206381e-05 1.22621217094557e-05 3.12679362713187e-06 1.69921510594616e-06 0 1.25399416078876e-06 7.19317059854047e-07 9.6049850571074e-05 3.12559814539114e-05 8.36038215971983e-07 2.76409499862796e-06 1.66780118946275e-06 0.000478671691348243 1.45124904056686e-05 0.00546607756130437 6.26830355657516e-06 1.25724433726466e-05 3.715056379191e-06 0.000126813062250343 9.80133573356607e-06 2.93088055348715e-05 6.05636701397549e-06 4.10576037980602e-06 6.82884719560997e-06 5.59742634111187e-06 2.54612400341613e-05 5.25545791446907e-06 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 5e-65 251 96.10 0.267482517482518 0 noncoding AGATGGCGGAGGAGTAGGAAGGGGAGAACATTTTCTCCCCCACAAATTCATCAAAAGAGCATTTAAACATCGAGTAAATTCCACAAAACAACTTCTGAATGCTGGCAGAGGACATCAGGCACCCAGAAAAGCCACCCAACTCTTCGAAAGGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGATGGAGTTCCGTCCGGGGAAGGGAGTCTTAAAAAGAGAAAAGTTTCCAAACACCAGGAAACCTTCTCACTGCTGAATCTGTGCTGAGCTTTGGAAGCACAGAGGGCAACATATCGGGGAGAAACAATAAATAAACAATTAAAACTCGCAGATTGCAAGCCCTACGGTAACTCCCCCAGCGGAGAAGCAGCACAGACGCCTGCACACGCCATTAGCAAGCGGGGGCTGGGCAGGGAGGCGCAGCGCGGGCTGCATCACTTAGAGTAAGAATCTGGCCTGAATACCCTGAGCGCTATCTGAGCGAAATAATTTGGGCTAGCAAACCAGACTGTGGGATATCTACCACGCGAAAAGCCAGCCCCAACCTAAGACAC TCONS_00066741 . 5' 11744 TCONS_00066741 . 5' 11744 EMBV3_39115 TGGCACAGGCGTCCGGGATTACATCCACGTCATGGAGAAGGCCTCTGGGAAGAAGATCCC Variant GeneID:523154|GALE:XM_002685712:403_cdna 882^998 2 EMBV3_27690 GeneID:523154 2 GENE GALE NULL UDP-galactose-4-epimerase EMBV3_41397 CTATCAGGAGCCCTAATCCTTTAGCTGCCTGAGTGTTATGCTGAAGAATGGAAAGTTCCT Gene BVV0102_162231 + 1 EMBV3_04979 GK000018.2:15131889-15186646 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088650 1 XLOC_053436 NonCoding TCONS_00088650 XLOC_053436 NonCoding NonCoding - 18:15164653-15165892 - TSS65996 1239 2 TCONS_00088650_3 51 0.281678773204197 1 0 0 0 0 6.70229705916982e-06 0 0 0 0 0 0 7.39043495507924e-06 0.000147183073891113 4.63159907772164e-06 0.000186033767673104 0 0.000341069657948137 0 0.000101254774110104 0 0 0 0 0 0 0 0 0 7.75236724226351e-06 0 0 XM_867793.5 LOC615876 PREDICTED: Bos taurus carcinoembryonic antigen-related cell adhesion molecule 18-like (LOC615876), mRNA. 3e-65 253 71.58 0.374495560936239 NM_001278392.1 CEACAM18 Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 18 (CEACAM18), mRNA. 1e-38 165 68.61 0.354317998385795 0 noncoding 0 0 0 0 -0.0339784701613902 0.805639953864678 -0.0178283856121021 0.702746114884809 AGTCAGTTTGCCATTTAGGTTACTAGGCTTACTCCTGATCAGCACACTGGAGGGCCCATAGGTAATTGTCCGAAAGATGACTTCATTTCTCTCAATACTGTGTGGGAGGATTTCCATCCCACACTGAAGTGGTGTGTTGCAGATGCTGACCCTTTGGATGATGAGCGTCTTGCTGTCTGGGTCATAGTTGGATACCTGTGAGTAACTCACATACCATTTGTCGTCAGTGGCACTGGAGTGGCAGATGGCAGCCACGGAATCCACGTTCTCTGCCGTGGAGCTGGTATTGACTGAGATCCCTGGGATTTCCAACTCTCGAATCTCAGGCCAGCCAGTTGCTCTCTAGGTCCTGTTGATGGCTTCTACCCACACAGCGTAGCTCCTGTGTCACTTAATTAAGACTCCCTGATCAGCAGGTCATCTGTCATGGCACACTTTCCCAGCCCTTGAACATGGGCCCATGCCACAGGACCAGTTTCCCTCAGAGGCTGCACCTGGGCCTGGAAAGGTCCATGAGTTGTACGGGTCCTCCTGGTGGAGGGGTCTCTCCAGGGACCAGGCAGCCTCTTGCGTGCTCTCACAGACCTGCATCAAAATAACTTTTGATCAAGTATAAGATAAAAAATTCTGAAGGTTAATTGGTTTACTTCTTTAGCATTACATAAAATAAGGGTGTGCCTCACACTTGATATCTTAGATTTAAGAAGATCAATATTTCATTTGGGAAGACACTTTTATTGGCCTTTTGGTTATAAACAGTTTGGCATTCCATCCCTTCAGGACCCCACCCCCGAAATGGAAGGCATGGCACAGTAAAAACATAGGAACTTTCCATTCTTCAGCATAACACTCAGGCAGCTAAAGGATTAGGGCTCCTGATAGAGAAAGATGATGACACAGAGAAAGGGCTTAGTCGTCAAAGGCTTAGTGTCAGTGAAGAAATAAGCAAGTGCAAGTTTTAAAGCTGAAACAGTCTACAGCAGTAGCAACAGCATAATCACACTACCTTTAAGCACCTAAAACCAGTCAGGCACCAAGTGCTTTACATAAACTCATTTAATCCTCTAACAATTGTATGTTCAGTTCACTTCAGTCCCTCAGTTGTGTCCGACTCTTTGCGACTCCGTGAATCGCTGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACCTAAACCCATGTCCATTGTGGCGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCT TCONS_00085590 . 3' 19313 TCONS_00085590 . 3' 20551 EMBV3_08531 GAAAGGAAATTAGGTGACTAAATTTTAGAAGCACTTCTTAAATCAAACCAACCCATGTTC Gene GeneID:613274|LOC613274:XM_002698498:589_cdna Constitutive 1 NULL GeneID:613274 26 GENE LOC613274 NULL hypothetical protein LOC613274 EMBV3_39027 CGTGAGTTCCTTCAGTCTGGAAAATCTGCCGGGATCTTGGGAGCGGGAAGGACGGGCATC Gene GeneID:100336609|LOC100336609:XM_002685088:40_cdna Constitutive 0 NULL GeneID:100336609 1 GENE LOC100336609 NULL potassium voltage-gated channel, subfamily H, member 8-like EMBV3_17065 AAAGGAACACAGATGATCAGAAAGGAGAAATCTAGTGCTTTTGGGGAGGAGGGGCCAGCG Gene BVT0102_215963 + 0 NULL GK000018.2:54249926-54262291 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32455 TGTTAGTAGCTCAGTTGTATCCGACTCTGCAACATCATGCCTCATTGTCTGCCAGGCTCC Gene BVV0101_072393 - 1 EMBV3_23265 GK000011.2:98561577-98567330 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27617 CCTGGGCGACCAAGAGGCTATCCAAGCAGCCATTAAGAAAGTTGACGATCAAGAAAAACT Gene GeneID:100138036|LOC100138036:XM_002707714:413_cdna Constitutive 0 NULL GeneID:100138036 11 GENE LOC100138036 NULL similar to 2,3-bisphosphoglycerate mutase EMBV3_05485 GCACTACGGCCTGACCTTCCGCAGACCCCGGCGGTGGTGGTGACTGACGGGGAACGCATT Variant GeneID:525813|ME3:NM_001075877:23_cdna 583^658 1 EMBV3_39586 GeneID:525813 29 GENE ME3 MGC139844 malic enzyme 3, NADP(+)-dependent, mitochondrial EMBV3_35451 AGAAAAAAAATGGGTAAGTTGCTGATGAAGACTAACTGGAGCTGATATTTGTGGTCTTGG Gene GeneID:100125286|FAM177A1:NM_001103329:2_cdna Constitutive 2 NULL GeneID:100125286 21 GENE FAM177A1 MGC148766 Protein FAM177A1 EMBV3_17421 TTGAATGTCACCATCACACGAGCCAAGTACAGCCTCTTCATCCTCGGACACTTGAGAACC Gene GeneID:534284|SETX:XM_002691649:371_cdna UTR3_Alt 2 NULL GeneID:534284 11 GENE SETX NULL senataxin EMBV3_28062 CGCTTCGGGATCCTCTCCAACTGCAACCACACCTACTGTCTCAAGTGTATTCGCAAGTGG Gene GeneID:514986|MKRN1:NM_001104979:661_cdna Constitutive 0 NULL GeneID:514986 4 GENE MKRN1 MGC148943 makorin ring finger protein 1 EMBV3_36765 GCACTGCTTGGACTCGTTGCTTATGCCGGAATTGTTTCTCCCCATGGAATGTAAGTAAGA Gene GeneID:513944|STAU1:XM_002692497:607_cdna Constitutive 0 NULL GeneID:513944 13 GENE STAU1 NULL staufen, RNA binding protein, homolog 1 (Drosophila) EMBV3_32600 GGCCAAGGTCATTCGTACTAAATCAACCCAGCGTCTCTCCTTTTCACTCACCATTGCCAC Gene GeneID:520463|LOC520463:XR_083623:309_cdna Constitutive 0 NULL GeneID:520463 3 PSEUDO LOC520463 NULL similar to Recombination activating gene 1 activating protein 1 EMBV3_19123 GACCACCTCCAGCATGTAAGCAAAAATCAGTACATCTGACACTACGCAAGAGTGTGAAGC Gene BVV0102_201797 - 1 EMBV3_00960 GK000024.2:50928291-50945821 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39691 CCAGCTGCAGGAGCGGAGCTACAACTTCAGGACAGCCACACATTGGTGGGAGAGCTCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37553 CGATCCTTCAATACTCCATCTCTGGCCTGAAAATATCCCTCACTTGTATAGACGCCAAGC Gene GeneID:785419|LOC785419:XR_084639:441_cdna Constitutive 0 NULL GeneID:785419 22 PSEUDO LOC785419 NULL similar to Upstream-binding protein 1 (LBP-1) EMBV3_21662 CCACGTTTTTAAAGATGGAGCCACTGAGGCCCAGAAATAAGATTTGACTTGCTTGAGATC Gene BVT0102_173198 + 0 NULL GK000003.2:111030978-111140758 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08514 CGCTGTCTTCTCTGTGGGCCGCACCTGGACACTCACTCCTTTTTTTAAAGACAATGGGAT Gene GeneID:508082|RDH13:NM_001075345:151_cdna Constitutive 0 NULL GeneID:508082 18 GENE RDH13 MGC140618 retinol dehydrogenase 13 (all-trans/9-cis) EMBV3_19275 TCTGCCGCCAGGTAAAAGCACACATTGGATGCTAGCGTGGGTTTCTGTTTGCATTTTGCG Gene GeneID:539714|KCNA6:XM_002687885:68_cdna Constitutive 0 NULL GeneID:539714 5 GENE KCNA6 NULL potassium voltage-gated channel, shaker-related subfamily, member 6 EMBV3_40584 ATTGGACCCCGAGGTTCAGGAAAGACCATGGACTGCTGCAGATCAATGATAAAATTGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19872 CATGTTATTCTTCTTTGGGCCTGGGTGACTGTTCGTTTGATAGAGACTATTGATGTCCAT Gene GeneID:504481|SC4MOL:NM_001098863:19_cdna UTR3_Alt 3 NULL GeneID:504481 17 GENE SC4MOL NULL sterol-C4-methyl oxidase-like EMBV3_33196 GCCACTGGGGCCAGAGATCATCCAACACTGACTTGTTTAACCCAGGGCACATGAGATGAA Gene GeneID:508389|RFC5:NM_001075358:93_cdna UTR3_Alt 3 NULL GeneID:508389 17 GENE RFC5 NULL replication factor C (activator 1) 5, 36.5kDa EMBV3_26798 AGAGGAACATCCGCCTGGATCTGAGGAGAGCACCTGAGACATCATTTCTTGTGCAAAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26858 ATTCCTCATCTGCGAGCTCTGCCAGTGTATCCAGCACACGGAGGACATGGAGAACGAGAT Gene GeneID:614837|SSU72:NM_001076349:192_cdna Constitutive 0 NULL GeneID:614837 16 GENE SSU72 MGC140543 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) EMBV3_00729 TCATTTAGGAACCCCCAGGAATGACCCCTTTACTTTGTAAGGCCATAAGCAAGCACCCCG Gene BVT0102_235637 + 1 EMBV3_16841 GK000030.2:96921351-96940081 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04297 GATGACATCCACTATTATATCCAGGCCAGCAGCAAGGCTGAGCGTTCCGAGTGGATTGAA Gene GeneID:784941|PLEK2:NM_001102334:235_cdna Constitutive 0 NULL GeneID:784941 10 GENE PLEK2 MGC142714 pleckstrin 2 EMBV3_11130 CACCCGCTGCAGACAGAAGAGGAAGGTCTGGGTGATGTCACTGGAAAAGAAAGCAGAAGA Gene GeneID:534129|CREB5:XM_002686873:105_cdna Constitutive 1 NULL GeneID:534129 4 GENE CREB5 NULL cAMP responsive element binding protein 5 EMBV3_22213 TACGTGGACAAAAACAGACGCAGAAATACACAGGCGAGGTGAGAGGTTAGCAGGTTCTCC Gene GeneID:100336518|LOC100336518:XM_002688117:4_cdna Constitutive 0 NULL GeneID:100336518 6 GENE LOC100336518 NULL hypothetical protein LOC100336518 EMBV3_05354 AGGCCGCGTATCCACGGAAGTGGACGCCAGGGAGCTGGAGGAGCACCACGGCATCCGGTG Variant GeneID:513453|TALDO1:NM_001035283:272_cdna 386^517 5 EMBV3_34811 GeneID:513453 29 GENE TALDO1 MGC133714 transaldolase 1 EMBV3_42389 AAGACGATGTGCAAAGAAAACCCATGCCCCCAAAGAGATTACAGCCACTCCTCCAGACAG Gene BVV0101_073601 + 1 EMBV3_26109 GK000011.2:21132093-21147965 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118983 TCONS_00118987 1 XLOC_072795 NonCoding TCONS_00118983 XLOC_072795 NonCoding NonCoding LOC100335190 21:28286176-28310751 j TSS89229 1129 1 TCONS_00118983_1 59 0.613817537643933 2 0.954138520387401 0.000301277207224476 6.1899379303545e-05 2.87511624808891e-05 5.37828262717813e-13 7.84672704567805e-14 1.00637412480766e-05 2.48119029064295e-14 2.36692362847849e-13 4.82855305760839e-05 0.000252154452096867 0.000182762221033934 6.00193448308577e-05 3.16787421523142e-12 4.95961814575624e-14 0 0.000393938689325465 0.000304297130650874 5.0651956161532e-13 3.41185331069385e-19 5.79557812802142e-05 2.44431341800243e-13 4.39402239585277e-05 7.79409636619536e-05 4.27112324813466e-13 4.24439472458305e-05 5.66085778960485e-05 7.58123366707729e-14 5.88366474438199e-05 1.13365422188932e-13 1.9702276203273e-13 XR_229176.1 LOC100335190 PREDICTED: Bos taurus uncharacterized LOC100335190 (LOC100335190), 0.0 1645 99.89 0.809565987599646 NM_006791.3 MORF4L1 Homo sapiens mortality factor 4 like 1 (MORF4L1), transcript 4e-51 206 81.33 0.194862710363153 0 noncoding 0 0 1 0 -1.9576423734419 0.00440849576563163 0.033524210832424 0.544455975985398 GACCAGCGGTTGCCTGGGTTGAGGAGATGGGCTCTGCGGGCGGTGGCAAATCCGGCCTAGTATGTGAAGTTGGCGGTGCCTGATGGCGCCTCTGACACGAAGCTGGGTGGGGTAGAGTAGAGGGTGGTAGTTGCGGCAGGTGGGAGAAGGAGGGAGGCGGCGGTGAATCACTTATAAATGACTCCGAAGCAGGACCTGGAGACTAAATTCCAGGAGGATGACACAGATTCACATCAAGATAAAGATGATGTGCAAAGAAAACCCATGCCCCCAAAGAGATTACAGCCACTCCTCCAGACAGATCCAGCAGGAATAACCACAAAAGTCACCTTGGGGCCACTTAATAGAACAGGGTGAGAGCTCCATGACCCCAACTAGGTAGGGTCTGTGAGTCCCATGTCAGCATTAAAGAAGTTACAGAAGACTGCCGTCTGTCCCTTATCACCCCAATAAAGGTTTCTTGGGGTTCACGTCTCAAGGAAAATTTGAAGTAGGAGATAGATGGTTCCTGGGCTGAACAGCTGGTGATTTTCAAACGGAGCAAAACTGAAGTTTGTCCTCAGCCAGACAAGAATGACGTATTTCCCTTCCTCCATTGTTAGGAGGGAATAAACTGATGGGGGAATTGTGCAGTGAAAAGGAAAAAAGAGGAATGAGTTTTTGTTTTTCACTGCTCTGAGAGCAAAGAAGATAAAGAACAGTGAGCAGGCCTGAACATTCCTAGTTTGTTTTACTTTAACTGCTCCTGGTTCTGAATGTCTGTAACTAAGTTTGCTTTTCTGCACCCTAACTCTGCAGGAGCCACACTTCACTTGACTCTGTGCTAAATACATCCTCTATCTGATGTTTACAACAGCCTTCCCCTTGTAGTTACATGTCAGAAAGAAGGCCTCAGAGCCACCAGACTGCCCAATGCAGTTACGGGTTACTGATGCCAGTTTATGACTGCCTTTGAAATGATGCAAGAGGAAGAAATCATGGTCCTGTCACCTTTGTTTCCTCATCACCGGCTCCTGACTCCTCCTGACTGTGAGCACCTGCCTTAGGGACACAGTTGTTGAGGCAGGAGCATGCTGTGTTCCCCTCTCCACTACCTGAGAATAAAAGCCACTATTCTGTTTCTTCCAAA EMBV3_36560 AAATTTGACTGGGTAAGCCCTCCTGATGGCCCTGAACGCCACTTTCGCTTCAATGGAGCT Gene GeneID:100140305|GGN:XM_002694970:130_cdna Constitutive 0 NULL GeneID:100140305 18 GENE GGN NULL gametogenetin EMBV3_16821 CTCCAGTATGAGTCCTCTGATGATTTGTAAGAGACGAGCTCTGACTGAAAGCTTTCCCAC Gene BVV0102_184996 + 0 NULL GK000007.2:2223661-2302456 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214996 TCONS_00214994 TCONS_00214995 TCONS_00214997 1 XLOC_130810 Coding TCONS_00214997 XLOC_130810 Coding Coding ZNF879 7:2241630-2256877 = TSS160674 1821 1 TCONS_00214997_5 418 5 0.880886789977699 0.00221260556378843 3.48979583103296e-07 0.000951144732615851 6.98220581371273e-05 0.00095951124137464 3.0372667877456e-05 0.000731036795966875 0.000709599492787845 0.00157181030375538 0.000273693532656993 3.9321853318107e-105 8.2005315738219e-05 0.000174098883595652 9.78420647298562e-05 2.36475369010447e-35 1.32518605416066e-60 0 0 0.0010604902192742 4.71662089740665e-104 5.22082999556964e-05 4.01535638945805e-204 0 6.32541175611817e-55 0.00121266330622034 0.000742181175202608 0.00137194057696588 1.46317177022256e-180 4.16558454814161e-05 0.000260827403314216 XM_005208361.1 ZNF879 PREDICTED: Bos taurus zinc finger protein 879 (ZNF879), transcript 0.0 3285 100.00 0.99945085118067 NM_001136116.1 ZNF879 Homo sapiens zinc finger protein 879 (ZNF879), mRNA. 0.0 2244 88.47 0.961010433827567 TCONS_00214997_5 sp|B4DU55|ZN879_HUMAN ZN879_HUMAN Zinc finger protein 879; 0.0 815 95.16 0.985645933014354 9 coding 0 0 0 0 GGCGACGCTAAGTATCCTGCACTAGGTTCTCCTCTTACCTTCTGTAGGGTCCGCCGCTTCCCACGTCCCGGCGAGCACAGGTGCCCTCTCTAAAAGGAGCAGCAGGACGGAGGGAGAAATGGCCACAAGGTTGCTGCCAGCCCAGGCTCTGGTGTCTGTGACATTCAGGGATGTGGCTGTGTTCTTCAGCCGGGACGAGTGGCTGTGCCTAGACTCTGCGCAGAGAACCTTGTACCAGGAGGTGATGCTGGAGAACTACAGCACCCTGTTCTCTCTGGGGATTCTGTTTTCCAAACCAAAAGTTATCCTCCGGTTAGAACAAGGGGAAGACCCCTGGATGGTGGAAAATGGAGTTTCTCAAAGCACATATCTAGGATGGGAGAGCTTGTTTGAAACCAGAATTTCTGAAGAAGAAAATCAGGAAGTAATGAATCAACTCTTAGGTGATGGTCCTTTTGACTTTAGGTTGGGAAAATCTACATAAACGAGGAAACCCTAGAGAATCAACAAAGCAAAGAAAACAGAGCTTTGAGGGAAGTCTTAGTTACCATCAAGAAAACATGCATGAAGGACAAGAGCTTTATAGGTATTGACCTTGGGAAAAATCTTGATCTGAAATTATCACTTATTAGAAAACCCAGAATCATTTCCAGAGGAAGGAAACCTTGTTCACAGCAGTATTCAATTCTATTTAAACAGCTGGGAATCAGCACAGTGCGTAAGTGTTACAAGTGTAATATCTGCGGGAAAATCTTCCTCCACAGTTCTTCCCTGAGTAAACATCAGAGAATCCATACTGGAGAGAAACTCTATAAATGTAAGGAATGTAGGAAAGCTTTTAGCCAAAGCTCGTCTCTAACTCAGCACCTGAGAGTTCATACTGGAGAGAAGCCTTACATATGTAGTGAATGCGGAAAAGCCTTCAGTTTCACTACATCTCTCATTGGACATCAGAGAATGCATACTGGAGAGAGACCCTATAAATGTAATGAATGTGGAAAAACATTTAAAGGTAGTTCATCCCTTAATAATCACCAGCGAATTCATACTGGAGAAAAGCCCTATAAGTGTAATGAATGTGGGAGAACCTTTAGCCAGTGCTCATCTCTTATTCAGCATCATAGAATTCATACTGGAGAGAAACCATATGAATGTAGTCAGTGTGGGAAAGCCTTTACTTCAATATCACGACTAAGTAGACACCACAGAATTCATACTGGAGAGAAACCTTTTAATTGTAATGAGTGTGGAAAGGTGTTTAGTTACCACTCAGCCCTTATTATACATCAGAGAATTCACACTGGTGAGAAACCTTATGCCTGTAAAGAATGCGGGAAAGCCTTTAGCCAAAGCTCAGCTCTTATACAACATCAAAGAATTCACACTGGAGAAAAACCCTACAAATGTAATGAATGTGGGAAAGCTTTCTCCTGGATTTCACGGCTTAATATACACAACAGAATCCATACTGGAGAGAAACCATATAATTGTAAGGAATGTGGAAAAGCTTTCAGTTCGCACTCAGCAGTTAATACTCATCGAAAGATTCATACCGGAGAGAAACCTTATAAATGTAATGACTGTGAAAAAGCTTTCAACCAAAGCTCAGCACTCATTCAGCACCAGAGAATTCATACTGGAGAGAAACCATATAATTGTAAAGTATGTGGGAAAGCCTTTAGACAAAGTTCATCCCTTATGACACATATGAGAATTCATACAGGAGAAAAGCCCTATAAATGTAAAGAATGTGGGAAAGCTTTCAGTCAGAGCTCGTCTCTTACAAATCATCAGAGGACTCATACTGGAGAAAAACTATAA EMBV3_38199 CAAAATGTTGTCAAGAGGATTGCCACCAGTCCCAGTTTTCTCCGAACCACCATGAGGCTC Gene BVV0102_103021 + 0 NULL GK000003.2:110630770-110646531 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171312 TCONS_00171319 TCONS_00171305 TCONS_00171311 TCONS_00171318 TCONS_00171308 TCONS_00171306 TCONS_00171310 TCONS_00171307 TCONS_00171316 TCONS_00171313 TCONS_00171317 TCONS_00171309 1 XLOC_103791 Coding TCONS_00171310 XLOC_103791 Coding Coding CLSPN 3:110604294-110632145 j TSS127805 3734 1 TCONS_00171310_6 402 17 0.866535008976661 0.00899150003876511 0.00528116235913367 0.00677028667575184 0.00354962094105535 0.00326428582774879 0.00198035471170324 0.00372843538574301 0.00576780113127206 0.00372535547640455 0.00122058215769936 0.000815183923812453 5.56817152457335e-05 0.000606807113871384 0.00195271214369623 0.00129435181551304 7.39958132927279e-09 0.000454090350069848 0.000890117259625201 0.0099374700382885 0.0102916694826153 0.00639069521667758 0.00143262811559928 0.000939954084950437 0.000386701274862794 0.0162924799550572 0.0141117746379829 0.00671040905453276 0.000372190527173041 0.00138650081913568 0.00159186572204101 XM_005204682.1 CLSPN PREDICTED: Bos taurus claspin (CLSPN), transcript variant X1, mRNA. 0.0 4185 99.74 0.624263524370648 NM_022111.3 CLSPN Homo sapiens claspin (CLSPN), transcript variant 1, mRNA. 0.0 1496 85.71 0.345206213176219 TCONS_00171310_6 sp|Q9HAW4|CLSPN_HUMAN CLSPN_HUMAN Claspin; 5e-119 379 88.55 0.562189054726368 0 coding 0 1 1 0 0.0202948991955991 0.852651465333102 0.00542963936515573 0.918618705770761 GGGCGAGGCCTCCACTCCGGCTGGGCGCGAAAGCTCGAACGCCGCTGCCTGGCTGGAGACGGCGGGAGCGGCCGCGTCCTGACGAGTAAGGCAACTGGGGACCTGTTTCGTCCCGAGTGGCGCGCTGAGGAGACCGGGGTCATGACGGGTGAAGTGGTTTCCGAGGTTCACCTAGAAATCAATGATTCAAAACTCATTTCACAAGAGGAAACAGACAGTCCTTCAGACAGTGGACAGGGCAGCTGTGAAACAATTGGGCCCTTGAGTGAACAAGATTCAGATGAAGAGATATTTGTGAGCAGGAAATTGAAAAGCAGGAAGGTGCTGCAAGAGAGTGATTCTGAAAGAGAAGACCCAGTGTCTCCAGAGAAAACTACCTATGACGCTGCTGAAGAGGAGGATAAAGAGAACCTGTGTGCTGAAAAGAATGGAGAAGCCAGAAGGATCCATAAAACTCTGGCAGACAGTGATGAAAGTGACGTTGAGGAGTCTTTATGTCAGGAGAATTCTGAAACCCAAATGACACCTTGCTTAGAGATGGGTCTCCAGTCTGAAAACTCTGTGGACTTTACAGTTGACAGAAAGATTTCCAAAAAGCCCTTGTGTGGTAAAGAAGGAATTGGAGGAAAAGCAAAAGTAAAATCAAAAGGAAGCCTTGGAGGAAGAAGAGGAGAAAGAAGAGGGAGCGGAGGAAGAAGGCAATGAGGAGACTGCAGAATTCCTTCTCGGTGGTGAAGAAATAGAAACCAAAGATGAGAAAGAAATAGATAAAGAAAATGATGATGGCAGTGGTGAAATTGGCAAGTCAGTTGGCCTGTCTGTCCCCAAGCCTCTCTCATCTGATTCTACCTTCCTTCTATTCAAGGACAGCTCTTCCAAGATGGGTTACTCTCCTAGTGAAGAAAAATCAGAAATAGATGAAAACTCAGGCAAAAGACCTAGCAAATTAGATGAAGATGATTCATGCTCATTACTGACCAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATAGGCTCCACACTTCCGTCCTATCAGCCCTGTAACAGACAAACAGGCCGTGGGACCAGTCTTTTCCCTACAGCAGGAGGATTCAGATCTCCTTCCCCAGGGCTGTTTCGAGCCAGTTTGGTCAGTTCAGCCTCTAAGAGTTCAGGAAAGCTGTCTGAGCCTTCACTTCCCATAGAGGATTCCCAAGATCTGTATAACGCCTCCCCAGAACCTAAGACACTTTTCCTAGGAGCAGGAGACTTCCAGTTCTGCTTAGAAGATGACACTCAGAGCCAACTGTTGGATGCAGATGGGGAAGAAGAAGGTGAAGAGGAGGAATTTGGAGACTTTCGGCTTGTCCCAAATGATAATGAATTTGATAGTGATGAGGATGAGCACAGTGAGTCTGACAAGGAGGATCTGACACCGGAAGACCGTGAAGATGATGATGAGGAAGACCTCCTGCAGCAGTCGGAGAAGTCAAAACGGCAAATGAGATTAAAGAAATACCTGGAGGACGAGGCAGAGGTGTCAGGGAGTGACATGGGAAGCGAAGATGAGTATGATGGGGAAGAGCTTGATGAATATGAAGAGGATGTGATTGATGAAGTACTTCCTTCTGATGAGGAACTGCAGAGTCAAGTCAAGAAAATACACATGAAAACAATGTTAGATGATGATAAGCGCGAGCTACGTTTGTACCAAGAAAGGTACCTTGCTGATGGGGACCTGCACAGCGATGGTCCTGGACGAATGAGGAGATTCCGCTGGAAAAACATAGATGATGCTTCCCAGATGGACTTGTTCCACAGAGACTCTGATGATGATCAGATTGAAGAACAGCTTGACGAGACGGAAGCCAGATGGAGAAAGGAGCGAATTGAACGAGAGCAGTGGCTTCGGGACCATGCACAGCAGGGGAAAATTGCAGCTGAAGATGAAGAAGAGATTGGGGAAGACAGTCAGTTTATGATGCTGGCCAAGAAGGTTACAGCCAAAGCTCTGCAGAAGAATGTCACACTGTGGTTATTCAAGAATCAAAGTCTTTATTCAGAAATCCTTTTGAAGCCATCAAACCGGGAAGTGACAACCAGCTGAAGACAGGCTCCCTGCTCAACCAGCCCAAAGCTGTGCTTCAGAAACTGGCTGCCCTCTCTGACCTCAACCCCAGTGCTCCCCGAAATTCTAGAAACTTCGTCTTCCATACACTTTCTCCTGTCAAGGCTGAGGCAGCAAAGGAATCATCTAAGCCTCGGGTACGGAGAAGGGGTCCGTCTTTAATGACATCCACTTCACCTAAGCGCCTCAAAATAGATGATAGTACTTCAGAATCGAAGCAAAGCATCTTCCGTTACTTGGAAAGCTAGCGCTATGAGGGCGCCAGCACCTCTGTGGGGGCTCCATTGATAAGTATCTGGCACTGAAGGCTGGAATTGATGCTCACGTGGATGATCCCCACCTCCTTCACAGTCAATGCATTAAGACTGAGGACAGATATTCCGGTTCTTTCCACCATGTGGCTCTGGACATCTCTTTCCTAGTATTACTTCCTGGGTTGGCCACTAATAATTCTGGAGTGTTTACAACAGCAACTTATGGGATACCCGAGTGTCCTCCATTAAATATTTGACATTTTACCCTAGCAACTAACTGGATTGATTCCTTTTGGTGAAAGGGGTAGTTGGAGGAAGAAAAAGTGTGACAGGACAGAAAATTGCAGAAAGCAGTGAATACTGAAACTGCGATGATGTCTTCACACCCCTACGACATGCAGGATGGTTACCAGGACTCAGTGAGAGGGGCTTCTTAGAGGACCTAGGAATCAACAGATGGGCTATTTTAGAAGTCATGCCCCTTCCGTTTTCCTTTCTGGCCCTTCCCAAGGCAGTCTCAAATTTCCGGTTCACTTTTGCTTCCTTTATAATAAGCACTCAAACTGGTACCCAAGTCAGAAAGAGCAAATTTTCTGGAGTATAAGGATGAAGATAGAAGGTTACAGCCAGTGGCCATCCACATTAGATAGTCTGTGGACCAGAGACCTCTCTTCTAGGACTTCAGTTTTTGATTTGAAACACTGTTGCTCAAGAACCTTCCTTTTCATTCTGACCGAAGAATTATATATAATCATTATTTATTGCATTCAGCTGGGTTGAGTACGTTGCCCTGACCAGTCAGAGGACAATGAAGTAATAACTTCATTACTTATTTTGAGAGAAGACCATCAAGGAGTTTCATCAAAATGTTGTCAAGAGGATTGCCACCAGTCCCAGTTTTCTCCGAACCACCATGAGGCTCTCAGAATTTTAAACATATTTTTCCCCCCTCGGAACCAAACGTCACTGCTTCCTTGGAAAAACGTCCCATGTAAACACTGTGGTTTCACTGTCATGAGCTGCACTTGGGAAGCTGGGTGAGCTGTGCCAGTTTTTTTTAACTGGTTGAGGAATCCCAATTTAACTGATGGAATTAGGATATAGGTTTTCTGCAGTTGTTTCTAATGTACAAGATGCTGACTTTGATGGAATTTGCATTTGTATATTTGTAATCTTATAACAGAGAAAATGTATATAAAGATGTTTTAATATGTATGTAGTTTTTCAATAAATCCAGTGCCTGGAGGGCACGATTTGGTGTCCAGACTAAATGCTCATTCTTAGGTCAAAACCTGTCTAATGTTGAGCATTTTGCTTTTAGAGTGCCTCTCTCCCAGGGGAGGCCTCTCTGGGCCTGGTGTGAGAGGCAT EMBV3_35985 CCCTGGTGGGCTAGTGAAGCTAAACAAGAGGGACTGTATTTCTGTGGAAAACAATTTGCA Gene GeneID:536654|GNAQ:NM_001110002:38_cdna Constitutive 1 NULL GeneID:536654 8 GENE GNAQ NULL guanine nucleotide binding protein (G protein), q polypeptide EMBV3_33302 GGTTTGCTTGTTTTTAGTTTCATCACCTGTTATCTCTAGGAGACTCGGAGCCAGTGATCC Gene GeneID:505585|NUCKS1:NM_001045920:37_cdna Constitutive 0 NULL GeneID:505585 16 GENE NUCKS1 MGC137955 nuclear casein kinase and cyclin-dependent kinase substrate 1 EMBV3_17737 ACACAAGAGAAGAATGCACTGCCTTCAAAAGAAACTATTGAACAGGAGAAGCAAGCAGGG Gene GeneID:100296164|LOC100296164:XM_002690860:238_cdna Constitutive 0 NULL GeneID:100296164 10 GENE LOC100296164 NULL hypothetical protein LOC100296164 EMBV3_07656 CCACGCTGGAGATCAACCCCAGACACGTTCTGATCAAGAAGCTCAGTCAGCTGAGAGACA Gene GeneID:514472|TRAP1:NM_001038675:162_cdna Constitutive 1 NULL GeneID:514472 25 GENE TRAP1 MGC134161 TNF receptor-associated protein 1 EMBV3_38331 GGTCTGGCTGTCAAAACACAAACCACTGGCCTCCAGAGCAATGTCAGTAATGTAGGAACC Gene BVV0102_205412 - 0 NULL GK000011.2:47995395-48010425 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35953 ATCGTCAGAGGCTTCTCCAGAATCTGGCCTCCGTGCGCGGGGACACTGAGTGCTCTGGGA Gene BVT0101_002530 + 1 EMBV3_39197 GK000023.2:52336133-52380454 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162856 TCONS_00138399 2 XLOC_099737 XLOC_084607 NonCoding TCONS_00138399 XLOC_084607 NonCoding NonCoding - 23:52339722-52340265 - TSS103689 543 2 TCONS_00138399_2 72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.64206423304416e-06 0.00162863493574537 0 0 0 0 0 0 0 8.19963178007646e-05 0.00206120385136738 3.08741624332956e-05 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0477054151333904 0.704602172874859 0.0229371038869225 0.70749187775082 GGGTGGGATTTGGCTTTCTGGGTTGGTTGCTATAAGGCGTGGGCCTGTTTGGAGGGAGAGGACCAGCGGCTCCCAGGAAGGATTTAGAGAATTCTGAATCGTGGAACACGTCTTTCATGATCTTCAAATAGTGTGGACAAAGAAACTGTATTCAATGTTTTAAAAATTAACTGCAAAGTGATCACAGTGGGAACAAAGGCGATTTTCACTATTGTGAATTTTAGAATTTGGTTATATTGCTCTGTGACTTAATGAAAACTATTCACTCATTTTTATTATGCGAAACACCACCGTGCGGCCTTCTGATCGACCTCGCGCAACAGCCACCACACAACGCACCACTGTTTGCGCACCTCACCTGGGGGACCTGGGTCGCACACGGGCAAAGGTCCGCGGGAGCACCCAGCTTCAAGCACGGCCATTAGGCATCGCGTTGCCCGTCCCAGAGCACTCAGTGTCCCCGCGCACGGAGGCCAGATTCTGGAGAAGCCTCTGACGATCGGCCCCGCCAGGAGTTCAGTTGAGGTTCTCTTGACCGTCACT TCONS_00135520 . 3' 104211 TCONS_00135520 . 3' 104753 EMBV3_11387 AAGGAAGCGAGGCTGTGAAGAGCTGACCTGCTTCCCCAGAGTGGGCAGGGGTTCAGAAAA Gene GeneID:513544|SAP30BP:NM_001075627:392_cdna Constitutive 0 NULL GeneID:513544 19 GENE SAP30BP MGC142452 SAP30 binding protein EMBV3_32618 TGGGCAGACCAGAATTTGACTTTTCATAAGGTCAGAAAGCAACATTGAATGCAGAAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16749 AACACTTCGAGTTCGACTGCAAGGACTGCATCTGCCTGGAAGGCGGGAGCGGCATCATCT Gene GeneID:789571|MUC2:XM_002683972:1_cdna Constitutive 0 NULL GeneID:789571 Un GENE MUC2 NULL mucin 2 EMBV3_05240 TCCTCAACTGGCATATCGCTATAGTGGAGAGGGCTGCACCAGGCTTACAGACATGTATCG Gene GeneID:280688|F9:NM_001103220:8_cdna Constitutive 0 NULL GeneID:280688 X GENE F9 MGC159634 coagulation factor IX EMBV3_35007 ATTCAAACAGCACACAACAGTGCACACGAAGAAGCACACAGCCCTCTGACTTCCCTGATC Gene BVT0102_329761 + 1 EMBV3_32472 GK000018.2:19124257-19157435 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15925 GAGAAGTCCTATTTCAGCTCCGTCTCAGGTCATCAGGCATTAGATCCCAGAGGCTGGTGA Gene BVV0102_092657 - 1 EMBV3_23927 GK000013.2:24085890-24241793 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29335 GGAGCTGCTACCCCAGAAAATCCAGAAATAGAGCTGCTTCGCCTAGAATTGGCAGAAATG Gene GeneID:539291|MYCBP:NM_001038565:251_cdna Constitutive 1 NULL GeneID:539291 3 GENE MYCBP AMY-1 MGC133485 c-myc binding protein EMBV3_25848 TGAACCAGCTCCGGATCAGCCCCGTGCCCCCAGTCGCGGGAGCGCCGTCCACGTACATCT Gene GeneID:508199|EPN1:NM_001038670:154_cdna Constitutive 1 NULL GeneID:508199 18 GENE EPN1 MGC134173 epsin 1 EMBV3_37998 AAGACTACGAGTCCTTGGGAAGACATTGGCCCTGTGTGAGCTCCTGTAGTTTTGTTTCCC Gene BVV0102_076991 - 0 NULL GK000030.2:92403413-92587041 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27193 TGGACTCTAGTCTTGAGGGACCCCTACCTAAGGAAACTGCAGCAGGTGGATTGCTTTCAA Gene GeneID:100337373|LOC100337373:XM_002695098:551_cdna Constitutive 1 NULL GeneID:100337373 18 GENE LOC100337373 NULL hypothetical protein LOC100337373 EMBV3_13569 GACTCTGGAGAGCTATGACCTGGAGAAAGACCTGGAGGATTTTAGAGCCAAGATGCATGG Gene GeneID:768078|MGC140224:NM_001077134:86_cdna Constitutive 0 NULL GeneID:768078 18 GENE MGC140224 NULL hypothetical protein MGC140224 EMBV3_12728 CGAGAAGCTGGAAGCATTTTGTGAGATGCACAAACCTCTGGACATTAAGCTTGTTGATAG Gene GeneID:504948|GPD2:NM_001100296:73_cdna Constitutive 0 NULL GeneID:504948 2 GENE GPD2 GPD-M GPDH-M glycerol-3-phosphate dehydrogenase 2 (mitochondrial) EMBV3_09774 CCACCAGTCTGCTTCGCAGTTCTGATTAGTAAACTTAATGCAGCTTGTCATTTGCATTAC Gene BVV0101_063320 - 1 EMBV3_41556 GK000011.2:6660399-6721484 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37908 TGTTGGGCCACACCCTCGGCTGACTTCATGTATCCTTTGCAGTGGCAGCTGATCAACAAG Gene GeneID:538466|TECTB:NM_001083733:69_cdna UTR3_Alt 2 NULL GeneID:538466 26 GENE TECTB MGC139051 tectorin beta EMBV3_25477 CAAGCCAGCCCGGAAAGGGGGGCAGAGAGATGGTTTGAATCCTACGACTGTTCCAAATTT Gene GeneID:529186|CLN5:NM_001046299:24_cdna Constitutive 1 NULL GeneID:529186 12 GENE CLN5 NULL ceroid-lipofuscinosis, neuronal 5 EMBV3_07370 TGTCACATGAGGAATGAGGAGAAGCCTGTGACTCTGGTAGCTTGCGGTGAATGATGCAGA Gene BVV0102_107893 + 0 NULL GK000006.2:29451874-30063468 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202901 TCONS_00202904 TCONS_00202900 1 XLOC_124060 Coding TCONS_00202904 XLOC_124060 NonCoding Coding - 6:29984248-29985419 - TSS152126 1171 1 TCONS_00202904_1 62 0.946199829205807 1 0 0 0 0 0 0 0 2.92947847239528e-07 0 1.61697800401952e-06 0.00233601464154404 0.000592202058878509 0.00046259475780857 7.7833067658432e-05 0.000777921683337325 3.75223033298347e-05 0 0 2.20194534185641e-05 0 0 0 1.42893894841501e-06 0 8.75843358640722e-06 0 0 0 0.000164294896288488 2.75138242311365e-05 9.85075088059003e-05 NM_001083717.1 CBR4 Bos taurus carbonyl reductase 4 (CBR4), mRNA. 0.0 648 81.68 0.572160546541418 0 noncoding 0 1 1 1 -0.0286603481102725 0.816951070287506 0.0117207864338078 0.840151738636182 TTTTCCTCCTGTCCTTCAGCTCTATCCTGGGACTCAAGCCCGGCCAAAACTAATGAAACTCAGGCTCTGACATCTCATTGCAAAAGTTCATTGAGAGACAAAGCAATAAGAGGTGGATTTGTTAGGATCCAGAGAGAAGCCACTCTTCAGGGTGTGAACCATTGCCGAGGGCAAGGGCTGGGGCCATGGAATTAGGCCTGGCTAGGTTTTGTGAAGGGATGGAATTCATATGCTAATAAGTGAGAGAATCATCCCAGCCATTGGGGAAACCACCCTCTCCTCCCTCAAGATGCGACCTTGTGCCTTCGAGCTGTCCTGCCACCTCTGGGTATGTCTGTTGGTTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGCCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACAGTGTCACATGAGGAATGAGGAGAAGCCTGTGACTCTGGTAGCTTGCGGTGAATGATGCAGAATTCATGATCTCTGAAGATTTAACTTCAGGACCAAGGACCAGGCTTGATCAATCCAGAGGTTTTCTGTAGCAGAGTTTTCTTAAAGTAAGAGAAGGGACAGAGAAAGCTCTGACACAGACGTCAGAAGGGGGACAGTGAGTACTCCCCCTCACTAGTGTTAACAAGGCAGTTACATACTTTTTAAATTAGTTATTACAATAAATCAAAAGAATGTCTCAAGTTTATGAAAATTTTACCAGACCCACTCCCACAATTTACATTTTAGGATAACAGGATTAGAATTTAACAATAGAAAGATCCTACCAGACCCAGTCCCATAATATACCTTCTAAGATACCAGGATTAGTCAGAAGGTTTTCAGGAAGGAGAAACTATCCTCAAGCAGGATACCTTATTGTTATATAATTCTTAGTACAGAGTTTAAACTGAGTTGTTTGTTGTATAACTATCAGTTTCAGAGTTAAAAGAAAAAAAAAAGTTTTATATGACTAAGATGAAGGAATGTAGGAGAAAAAAAAAAGATGTTTTTCTTTTCCTCCTCCTTGAGAATTCCAGACCCCCATCTCCACTTTGAGAGACCCAGACCCCTTTCTCCTCCTCGGGGACCCTGGACTTCTTATCAACCTGCCTAGGAATTGACACTCTCAACTCCATACCCTGTCCAAATAAATGTTCAATGAATCCTCTTC TCONS_00204804 r 3' 78050 TCONS_00204804 r 3' 79220 EMBV3_40829 AAGTTGGATAACTGGGCACAGTTGGAAAAGAATTAAAAGCATCCAGGAAGACCTCGTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04268 ATGCACCACGAGGACTTTAAAGAAGACCTGAAGAAATTCCGCACCAAGAGCCGGACCTGG Gene GeneID:520188|CDC25A:NM_001101100:199_cdna Constitutive 0 NULL GeneID:520188 22 GENE CDC25A NULL cell division cycle 25 homolog A (S. pombe) EMBV3_35847 CGCAATGCTGGGGAAATGGTGAAATAGGCCAAAGAAGCTAATTTATTTTCTATTTCTGTA Variant GeneID:534296|MTHFD1L:NM_001076018:7_cdna 227^306 1 EMBV3_17716 GeneID:534296 9 GENE MTHFD1L MGC140483 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like EMBV3_29442 ATCCAGAAAACCGGAAGGAATGGACAAACCAGTGCTCACGTCTTCCCCCGCCATTGTTGT Gene GeneID:536610|UNC80:XM_002685551:161_cdna Constitutive 0 NULL GeneID:536610 2 GENE UNC80 NULL unc-80 homolog (C. elegans) EMBV3_11988 GGTGGGTTGGGCTGGATATCTTTGTAGATGTGGACCACCAGGGGTTGTTGCAAACCAATT Gene GeneID:510474|SFRS5:NM_001098929:79_cdna Constitutive 1 NULL GeneID:510474 10 GENE SFRS5 MGC166270 splicing factor, arginine/serine-rich 5 EMBV3_00225 AAGGGAGGGAACTACATGATTTACTATTGGCTAAGACTTCTTTCAACGTAGAATGAGGAC Gene BVT0101_008041 + 0 NULL GK000001.2:109956784-110277781 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28649 ACGTGGAGCAGAGAAGCAGAGGGAATGTCAGAACAGCACCATATAACGGGAAGGCAGAGA Gene BVT0102_166044 + 0 NULL GK000022.2:1690079-1746285 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127761 1 XLOC_077746 Coding TCONS_00127761 XLOC_077746 NonCoding Coding - 22:1739251-1740201 - TSS95497 673 1 TCONS_00127761_1 76 2 0.292939936775553 0 0 0 0 0 3.61261029384491e-50 0 0 0 0.000189523195233956 0 1.99021418968228e-05 0 0 0.000422822497890913 0 0 0.000857490440359595 0 2.24504801461316e-302 0 0.000496181543457228 0 0 0 0.000533864924991337 0 0.000342531919605622 7.21340278488425e-06 0 XM_005196362.1 LOC522335 PREDICTED: Bos taurus serine/threonine-protein kinase Nek10-like (LOC522335), transcript variant X1, mRNA. 4e-149 531 100.00 0.435364041604755 0 noncoding 0 0 0 0 -0.0546596240264227 0.628430653330877 -0.00608263817312381 0.923435021132599 GAGCACCAACGGCGCTACGGGCAGCGGTACCCCTGAGACTGAGGGGACAGGCGCGAGGTGGGGCCTAGGAGGACAGGCCCCGAACCAGAGTAGCGTGACCGCAGCAGAAACGATGAGATGCGCTTCGGCCTGAAGGAGGGGCCCTCCCTCGGGCGGAAGCCTGAGTGTGTCTCTCCCAGTTTGCTCCTAAACCTCTGGAGACTCCTTCATAAAACCGTTTCTGGGCGTCGCTTCTCTGCCTTCCCGTTATATGGTGCTGTTCTGACATTCCCTCTGCTTCTCTGCTCCACGTGGGTGAGCCTGTCCAGTTCCATGCCTCCAGGCAACACACGTCTACTGATTCCTTGAAAACCTCCACCTTCAGCCTAGGCTGCTCCGCTCGCGCCAGACCCCAGAACCCAACTGCGAGTTAGCTCCACACGTGTGCAGGCTTAAACATCATCTTCCCTGTTCCCACGGAGTGTCTCGCCCTTGGATTCCTTATCCGAGGCACCAAGACACCAAAACCACATCTAGACAATTGACATTTACTGCCTCTGCTTCATTTCCACCAGTTATCAAGGCGGTGCCTTCTTCATAGCTGTCAAATCAGTTCCCACCTCACTGTCGCCCTTCTTGCATTATCATTTCCACCAGTATATTGGTTAAATTCAACAAGGGTCCACCTTTCCCG TCONS_00127760 TCONS_00127758 s 3' 278 TCONS_00127760 s 5' 0 EMBV3_15467 TGCAATTATAGCACAAGATGTTCATTATAATTGATAACTTGATGTAGTTGTTACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_43211 CTGGGCCCGATTTGGGGTCTGGATGCTGATTGGATTTGCTATCTACTTCGGCTATGGGAT Gene GeneID:539065|SLC7A3:NM_001078019:71_cdna Constitutive 0 NULL GeneID:539065 X GENE SLC7A3 MGC152222 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 EMBV3_16601 CCACATACGGTTGGCTGGTAAACAGCTTATTTTGATACAGGAATGCTTGGGTGCATATGG Gene GeneID:100337332|LOC100337332:XM_002696301:51_cdna UTR3_Alt 2 NULL GeneID:100337332 20 GENE LOC100337332 NULL splicing factor, arginine/serine-rich 12-like EMBV3_00703 ATACTGCTGTCCTGGTGATGTCCATTGGAAACCTGTGTTCTCTTACCTTCTCCAGCCCTC Gene GeneID:521790|PI4K2B:NM_001102064:180_cdna UTR3_Alt 2 NULL GeneID:521790 6 GENE PI4K2B MGC152558 phosphatidylinositol 4-kinase type 2 beta EMBV3_28102 GCAGTGGGGTGAGGCTTTTTAATCTCATGCCCTCTTCTAAATGTGCCGTGGGGCTAGACT Gene GeneID:100125315|TEAD2:NM_001103347:8_cdna Constitutive 0 NULL GeneID:100125315 18 GENE TEAD2 MGC139952 TEA domain family member 2 EMBV3_13930 GTCACAGCATCTCACACTCAGAGCTGAAGCCGCACGAGTGCAAGGATTGCGGCAAGACCT Gene GeneID:789616|ZNF524:XM_002695379:219_cdna Constitutive 0 NULL GeneID:789616 18 GENE ZNF524 NULL zinc finger protein 524 EMBV3_42596 CAGGCATCAGATCCTGGTCCCTGCTGGTTGATAGTCTGGGCTGGAAGCTCTTCTACGTCA Variant GeneID:618343|C19H17orf62:NM_001078087:150_cdna 146^187 1 EMBV3_41998 GeneID:618343 19 GENE C19H17orf62 C17orf62 chromosome 17 open reading frame 62 ortholog EMBV3_35495 GGGCAATGGACGAATGACCCTTGGCAATTTCTCAGCCCCTGTGTACATTCGAACCTGCCA Gene GeneID:789905|LYPD5:XM_002695161:758_cdna Constitutive 0 NULL GeneID:789905 18 GENE LYPD5 NULL LY6/PLAUR domain containing 5 EMBV3_12590 GAGGACCAGCTTCCTCTGGACTATGCCAAGGGCCACCTGAATACCTGCAGCTTCAACGTG Variant GeneID:781568|TRAF4:NM_001101280:169_cdna 291^395 1 EMBV3_02150 GeneID:781568 19 GENE TRAF4 NULL TNF receptor-associated factor 4 EMBV3_15800 AAGACATGCCTGCAAAATGTAAGCAAGCACTTCCCACTGAAGGGTGCACACGCATACACG Gene BVV0102_145911 + 0 NULL GK000005.2:26701886-26702493 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36217 TGAGAGCCAGGGTTAGTTGAATGTGCTAAGAAGAATATGCTGGGAGGCAGGTTCCAGTGG Gene BVV0101_000905 + 0 NULL GK000015.2:78592307-78614937 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062465 TCONS_00062467 TCONS_00062466 1 XLOC_037305 Coding TCONS_00062467 XLOC_037305 Coding Coding MTCH2 15:78611058-78633621 = TSS46289 5046 1 TCONS_00062467_2 303 0.121878715814507 14 0.776970126761812 0.000623669517512572 0.00178196992304678 0.000560247941194524 0.00103790045750481 0.00122790486376656 0.000289481874283503 0.00071694275419593 0.00132582628621741 0.00117149192090292 0.000210348364850542 4.6925208165442e-05 0.000195152702162865 3.39491331069833e-05 3.47339658994364e-05 0.000294067784604495 0.00370623435821774 0.00310343779307662 0.00550958634792556 2.05687274436525e-05 0.00156711988748657 9.84063838379434e-05 0.0020312549939426 0.00369561938110464 0.00326156862525983 0.000236315586646549 0.000225723644544071 0.000119216566814646 0.000338670603955892 0.000220187874718053 0.000305285073037493 XM_005216408.1 MTCH2 PREDICTED: Bos taurus mitochondrial carrier 2 (MTCH2), transcript 0.0 4397 100.00 0.482956797463337 NM_014342.3 MTCH2 Homo sapiens mitochondrial carrier 2 (MTCH2), mRNA. 0.0 1968 87.24 0.310543004359889 TCONS_00062467_2 sp|Q9N285|MTCH2_BOVIN MTCH2_BOVIN Mitochondrial carrier homolog 2; 0.0 627 99.34 0.996699669966997 1 coding 1 1 1 1 0.0676231087326802 0.619277720968819 0.0269920896512291 0.706221176572977 GAGGCGCGCTCCGGAGCGTGCGTGCGCGCGCGCCGCGGGCGGGCCAGTGAAGCCGGCGGCCCTGGCACGTGACCCGGGACCGGCTCGGTCGCTTGGTGGCTCGGTCTGTCTGTCCGTCCGCGGGTGCCATCATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAGGTGCTCATCCAGGTGGGATATGAGCCTCTTGCTCCAACAGTAGGACGAAATATTTTTGGGCGGCAAGTCTGTCAACTTCCTGGTCTCTTTTGTTATGCTCAGCACATCGCGAGCATTGATGGGAAGCGTGGATTGTTCACAGGCTTAACTCCAAGACTGTGTTCAGGCGTCCTTGGAACTGTGGTCCATGGTAAAGTTCTACAGCATTACCAGGAGTGTGACAAGGCTGAGGAGTCAGGATCTGGAAATGTACAGAAAGAAGTCTCATCTTCCTTTGACCGGGTTATCAAAGAGACAACTCGGGAGATGATGGCTCGTTCTGCTGCTACCCTCATCACACATCCCTTCCACGTGATCACTCTGAGATCTATGGTACAATTCATTGGCAGAGAATCCAAGTACTGTGGACTTTGTGACTCCATAGCAACAATCTATCGGGAAGAGGGCATCCTAGGATTTTTTGCGGGCCTTATCCCTCGCCTGCTCGGTGACATCATCTCCTTGTGGCTTTGTAACTCGCTGGCCTACCTCGTCAATACCTACGCTCTGGATAGTGGGGTTTCCACCATGAATGAAATGAAGAGCTATTCCCAAGCTGTCACAGGATTTTTTGCCAGTATGTTGACCTATCCCTTTGTGCTTGTCTCTAATCTTATGGCTGTCAACAACTGTGGGCTTGCTGGTGGATGCCCTCCCTATGCCCCAGTATATTCTTCTTGGATAGATTGCTGGTGCATGCTACAGAAAGAGGGAAATATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAGGTCCCCTTTGGGAAGACCTACTGTTGTGACCTGAGAATGTTGATTTGAAGATGTGGGGCAGGGACAGTGACATTTCTATAGTCCCAGACGCACAGAATTATGGGAGAGAATGTTGATTTCTATACAGTGTGGCGCGCTTTTTTTAATAATCATTTAATCTTGGGAAAATGGAGGTGTTTGGTGTCTGCCTTTTTTGTTCTTTTTCCCAGCACATGATTTACCACTGATACTCCCCCCTGAAATGGGACATTTTAACCCCAGGTTATTTTACTTCAGAAGTTGCATTTACCTAAAGGTACCGGCAAGTTGTCATGCAATTTGAGTCTCAATTTAAGGTTTTGTAAAATGAAGAGAGTACAGTCCCATGAAGAAAGAAAATGCAAAAGTTAAGAAAATGAATAAGGCAAATGATACGGGAAGTCATAAACTACCTTTTCTTTGGTAGACCTTAAAACTCAGCGGCATCCACTGGAACCTGCCTCCCAGCATATTCTTCTTAGCACATTCAACTAACCCTGGCTCTCATACCTCACAGAAAGGACAATACACGCCTAACCTACCCTAGAAAATCTGCACGCTGTTATTGCAAAGCAAGAAATTGTGTTGCCAACAACAAGAAAAAAGGACAGTTACAGAGAAAAAGCAGGATTTGGAAAGGAAGTGTAATGTCTCCTTTTTCACCCCTCACAGAGGTTCTTATTGTCATATGAAGTATGAAAAGCAAATACTGTAGCATTAGCCTTGCCAGTCCCTAAATTACATCATTATACAGTTCTAACTGCATGTAATCTCTTGTTCTTCGGTTTTTGTTTTGTTGCGTTTTGTCCTTGCAGAAGGTGAGCAGTTTGTTTTCCATTCCTCATGACACCCTTGGAAGGTATACTTGTAACCTCACGTCTGATGGTGCAGACTTACATCCATAGGGTTCTTAGACTACTGACCAGCTCGCATGTCATACCCTCAGTTAGGCATGTTAACATTCATAGTAGGGGAAAAATCATTTTAGAAGGAAATAAATATCCACTCAAACATAAAGCTCTTATTTTACTCAGGCCTTTTCCAAGCAGGTTAAAATGCTCTTAAAATGAGAAAGCATTTGGTTTTACTTATAATCCACTGGGTTGTTGCCAAATGAGTAAACGCGTCATTTGCTGTTTCTCAGAAGAATTCGCTACTTCCCGTCAAAGCAGCAGCACCCACAGTGTTAGACTGAGCATGCAGGGTCTCCTCTCCTCGCCCCCACACGCCGAGTTTAAGAGTATATAGCCTGAAGCTCGTGAGTAGCTTACCTTGAAATGTCTTTGATGTCTCTTTGTCTCAAAAAGCAATGTAAATTTTATATTCAATATTATCTGCATTTGTTTTAATATAAAAATGTTTTGCATTACCTACTTTTTTTTTCCCCAAAAAAAATCTTCAAGTAAAGATGATCTAGGAAACTGCCATGTTTATGACCTGTGGCTTCTGTCTTCACACACGCCTGCCTAGTTGGGGAGCCTGTCTGACTATGAGAACCAGTCTGCCACCAGAGGGCGCCAAGGCTCCGGTTTTGCCTTTGAAAGTTGGGCTGTGGAAAAATTTCACCAAGGCCTGGGATTAGTCAGCACACTGGCCGATCCAGCTCACTGCATCCAGGCTGTCGGTCCCATAAGGGTACTACACCTGTGCTTATTGTTCGGTTGCGTCCAACTCTCTGTGACCCCGTGGACTGTAGCCCCTCCAGGCTCCTCTGTCCATGGGATTTTTCAGGCAAGAGGACTACATTTGTGGTCCTCCATGAAATTTTATAAGCCATTAACATACTCAGAAGTTTATTCTGGGGCTGGTAAATGCAGGTATGTAGGTACTTTTAAGAGACACACAAAAAATGAAGTGACTCATAATGTAAATCATGTAAACCCAGATAAGCGTTATCTTGTGGGCTGTACTTGTGAAACTGGTACAGGTGGTTTGGCTTGGCAGGGCTGAGCTAAGTTGCCAGGAAGTATTCCCTCTGGGGAGTGTGCTGGTCACTGAAGCTTGACTGAAGGAGAGAATGTGGAGTTTCCTGGGACTTGGGTGCTTGTAAAAGTACCAGGCTATACAGACAACTTTAGGATGAAAGAAACTTTAAACCTAGTCCTGGATCCCAGCTTCTCATGTTACCTAAACATACTGTAGTTTTGCTGTGATTTCCTCCTCTAGAAATGTCCTCCTTCCCTCTCCCCCTTGAAGTGTTCCCTATATGGTAAAATTCAGTTCTAGGGTCATCTCTTTGTGAAGTCTCTCTTAAGTCCTCTCAGCTGGACAAGATCTTTGCCTTCAAACTCTTCCTCCCCCAAGGCTTGTAATGATATTGCCAACTAAACAGACAGAAGAGAAACTACACCACACACTGAGTTCAGGGCTTACACAGCAGCAGCATCGCTTCTCTCTGATCTGAAAATCTGTGGGAAAAAATTATATTGATCCCTTTAAAACAGGCCCACTGAAACAGCCTCCCTGGGCTTTATGGGAAAAGTGTAGCTGGTGAAGTGAGAGTGCGTGAAGTTGGTCAGTTTAAGGTGCCGTGCGTGGCAGACACGTGGCAAGCGAGGAGAACAATGGTAGTGACTGTACCGCCTGCCATGGAAGCTTGACTTCTCATAATCTTTGGTACAGTAGGTGTCTCCACTTTAGAAATAAAGAAAATGAGACTCAAGTAACTCATTCAGAATTATATAGCTAGTATGTTTCAGAGCCAAGTTCAAACCCGAGTCACATTCCAAGGCATGTTTGCTGCTTCCTAGGAGCAATGAAATGCTGAGAGAAAGTAGCCAGTCAACCGAATGGTAAGGGGTCCATCCATCTGAGGACAGGTGCCCTCCCTTGTAGTCAAATCAGTGGACCAAAGAAAAGAGCCTTCTGCAGGATAGTGTAAAACGGTCTTCGATTAGAAGAGACCTGGTCTTTTGCCTCTGCAGAATGATAAATAGGTGAAGCAACTGAAGATAGAAATGATCACCGTTACTTTTCTAGGCTATTGGGATTTATACAGATGGGACACTTACTGTATGGGAAGGCTTTATTCCTATGAGCACATCAGTCCAGTACATCTACTCCCCATTTGAAGGCTAACAGTTTTTGAAAGTGATTTATTTACATGTCAGCTCCTCACTGGATTCTTTTTTTTTTTTTTTTTTGCCTTGGCTCATGGGATCTTAGTTCTGTAACTAGAAATGAAACCTGGACTCTCAGCAGTGAAAGCATGGACTCATAACCACCAGACCACCAAGGAATTCCCTCAGTGGATTCTTCTGAAACATACTTGCCTATTGGATGGGTTCATTCGTGCTGCCTCCCTAGGTGCCATAGTAATTTGTATCTTTGGACTTTTGGGTGGTTTTGTTTTGTTTTGTTTTCTTTTTAGTTTCAGTGGAGCCATGCAGCTCTGGGATCTTAGTTCCCCAACCAAGGATCAAACCTGCGCCCTTGGCAGTGAGAGCACAGAGTTCTGATCACTGGGCTGCTAGAGAATTGCTCTGGAGTTTGTTTTTGAAAGTAGACAAAGATGGGTGTCTCACTCCTCTAGAGAGATTTTTTTTTTTTTTAGGGTTAAGGATGTCATATGTGACATCTCATTTTTTCTCCCTCTCTTGATCCCTCATTTTATTGTCTCATCAGACTTGAGAGAATTAGAGTCTTGAACTCTGATTTTTGTCCTAGAGAGAAAGTTTCAAATGAAAGATCCTTTTGCCACCAGTGCCCCCCCAGCCCAAAAAAAAAGAAATCTTTGCAGAAGAATATCTTGGCTAGTAGCAGCAATTAGTTTTCTAAAGCAACTGTTTCCCTTCCAACCAACTTTGTCCATATGAGTCAGCTTCCTCCTCTGTTCACTGCCTTCCCACGCTGTCTTGGGGAGGCAGGTCTTCCAAACACATTGTCATGAGAGGAAATGTTGAAAAGCCCTTTTGCCTCGGTCTCATAAGTGGATTCCTCTGCAGCCGGGGCCCCAGTCTCCTGTCTGGGATCAATTAGTCAAATCTTGTATTAAAAACCACAGTTGTTCTGGAACCAACTTACTACCACCCCA EMBV3_14237 AACTGACAGGGAACTCCTGGATCTCTCTTTTAAATGTTCCCCGCTGCAGCCAGAATGGCA Gene GeneID:527039|PMS2:XM_002698220:806_cdna Constitutive 0 NULL GeneID:527039 25 GENE PMS2 NULL PMS2 postmeiotic segregation increased 2 (S. cerevisiae) EMBV3_02701 TGCCTTTTAGCTGACAGCATTGCTTAAACAGGATAGTAGTTGGCAAGATGAAACGTCAGA Gene GeneID:539120|VEZF1:NM_001102227:42_cdna Constitutive 2 NULL GeneID:539120 19 GENE VEZF1 MGC152435 vascular endothelial zinc finger 1 EMBV3_13699 TGCTCTGCATGCCTTGCCCTCTGGCATCAGGTGGCGTCTCTAGCCATGGACAGTCTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27943 AACTCCCCAGAAAACCTGGCCTAAGCAAGTGAAAAGTTGACCCCAGTCTTTGTGCTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27400 GCTGACGCAGAAGGACTTGGCCACGAAAATCAAGATCGAGAGAGCCATTGGCCTGAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07826 TTCTGAAGCAGCACCAAGAGCAGCCAGAGATTGTAACCTCAAGGAAACCACGAGTCTGAG Gene GeneID:617245|PTTG1IP:NM_001046594:53_cdna Constitutive 0 NULL GeneID:617245 1 GENE PTTG1IP MGC137305 pituitary tumor-transforming 1 interacting protein EMBV3_11664 GCCTCAGTGCGCTGTATGCATCGGATCTCAAAGCCTCTAAAATTGGATCCCTGTTATGTG Gene GeneID:508288|THAP9:XM_002688390:51_cdna Constitutive 1 NULL GeneID:508288 6 GENE THAP9 NULL THAP domain containing 9 EMBV3_28511 CCACGGCTATGGTGCCTTCCTGACTCTCAGTATCCTGGACCGATATTACACGCCAACTAT Gene GeneID:516919|PSMB2:NM_001015615:182_cdna Constitutive 0 NULL GeneID:516919 3 GENE PSMB2 NULL proteasome (prosome, macropain) subunit, beta type, 2 EMBV3_02484 GATTCAACCATCCACTCCTATGACCTTGTCAGCAAACTGAACCTGCCCAACAATGGGAGG Gene GeneID:782551|MAGEB5:XM_002700286:9_cdna Constitutive 0 NULL GeneID:782551 X GENE MAGEB5 NULL melanoma antigen family B, 5 EMBV3_29519 GTGGAAGAATCCATTTGCTCCTGAGTCCACTGTCAGAATCCCGAAGCTATGAACCCTGTC Gene GeneID:536745|GPKOW:XM_002700080:165_cdna UTR3_Alt 2 NULL GeneID:536745 X GENE GPKOW NULL G patch domain and KOW motifs EMBV3_34866 TCCGAGGCCGCAGCATTCATGATGAACTTACTTCAGGTTGTGCGTGACCACTGGGTACAT Gene GeneID:327690|NDUFB1:NM_175809:142_cdna Constitutive 0 NULL GeneID:327690 21 GENE NDUFB1 MNLL NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa EMBV3_29419 AGGCAGTTACCACACTTCCCTGCCCCAGCCTGTTTCTTTTGGCCTGGTTTGGACTACAAT Gene GeneID:517788|UBAP1:NM_001100376:31_cdna UTR3_Alt 2 NULL GeneID:517788 8 GENE UBAP1 NULL ubiquitin associated protein 1 EMBV3_18415 CCAGATGAGAACCCTCAGTGGATGTTAGAAGCCTTGGGGGAAAGACAGTTGAGAGAGAAG Gene BVT0102_240698 + 1 EMBV3_16183 GK000025.2:7530481-7563333 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40424 TATGAGCCCTTGGAGTAGCCTGGGAGGGACTTTATTGCCTCAGTAACTCTTCACAACCCG Gene BVV0102_215484 + 0 NULL GK000014.2:10224155-10712761 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31233 CAATCTCCAGAAAGTCGGAGGATGACGAAAAGCTGAAAAAGAGGAAGGAGCGATTTGGGA Gene GeneID:732539|SARNP:NM_001042654:85_cdna Constitutive 1 NULL GeneID:732539 5 GENE SARNP CIP29 SAP domain containing ribonucleoprotein EMBV3_41824 GTGAGGGCGTGAACATCTCACTTGGAAAAGGGATGCTGCCGGGCCAGGGGTTTATAATTT Gene BVT0102_097877 + 0 NULL GK000017.2:74298283-74307985 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076384 TCONS_00076385 1 XLOC_046814 Coding TCONS_00076385 XLOC_046814 NonCoding Coding CRKL 17:74291178-74300456 j TSS57354 3123 2 TCONS_00076385_3 129 2 0.663576587258812 0.00350197596203439 0.0041053763446027 0.004554170379479 0.000683970655072026 0.00214687541261881 0.000883568127335229 0.00203557568324794 0.00244164689585627 0.00290341986655297 0.000528746320876802 7.61732556812487e-09 0.000272876672759318 0.000866056847829788 0.00158699541174019 0.00136484783421531 0.00512054667072607 0.00588213385841649 0.00257738037167453 0.00379031105418593 0.00413467166564258 0.000340781859418838 0.00166174095998576 0.00293254309907794 0.00251535333101445 0.00518283099941303 0.00487178048605455 0.00293653502560031 0.000632056525785541 0.000713984564494427 0.00184392315535122 XM_002694645.3 CRKL PREDICTED: Bos taurus v-crk sarcoma virus CT10 oncogene homolog (avian)-like (CRKL), mRNA. 0.0 4545 100.00 0.806596221581812 NM_005207.3 CRKL Homo sapiens v-crk avian sarcoma virus CT10 oncogene homolog-like (CRKL), mRNA. 5e-112 410 85.45 0.114953570284982 0 noncoding 0 0 0 0 0.00287713371591669 0.980820595820417 0.017936204764939 0.761867126846924 CCCAGGGAACCCTGTGTGAACACAGACGCCATGGCGGCCTGCGGACAGAGGGTCTGGAAGGGAGTTTGTTGCTCCCCGAGCACGGATCGAACCTGTGCCTAAGGTGGGTGACATCGTGAAGGTCACGAGGATGAACATCAACGGCCAGTGGGAGGGCGAGGTGAACGGGCGCAAAGGGCTCTTTCCCTTCACGCACGTCAAGATCATCGACCCCCAGAACCCGGACGAGAGCGAGTGACCGCTGCCGCCCCGCACCTGCTGTTCGTCCTGCCCGTCTGTCTCCTCCCGCTGGGGAAGCCCCCTCTGGCCGGGCCCCGCGCTGCCCGTCTCGGCTTTGCAGCGGCGGCCCCGCCCGGGCGTGCTTGGGGCTGCCCGCATTGTATCATAGTCGTGTTGTCACAGAGTAGCTGATCGTAGAGTCGTTGGATCATAAACTGGAAACACTGGTGGAGGCGCATGGGGGCGAGAAGGTGCCCCCTGGCCCGGACGCGCGGCGGCGGGGCTGTGCCCGGGGACAAGTGGAGCGCAGACTCTTCAGGAGAGGGCCGCTGCCCTGCACTCTCCACGTCTGGCTTTTGGTTTATCTTTCTTTCCCCCCGTTTGGTTTTGGAAGGCTTCGTTAATTAGGCCTGTTTGTTCTGAAGAGGTGTTTAAGTAGCAGGTTAGGTTCCGTGATGAGATCAGGGATGAGTCGCTGTCACCATGGGAGCAGGCGGGACGGAGCCCTGAGGCAGCGGTCGTCCTGTCTGGAGTTGACCGAGCAGCCCCCCAGTGGTCCTGCGTTTCCCCGCTGTGCACACAGCCTCCCGGACGACATGGCCAAAGGCGTCAGAGCTGGGGGCTCACCCTGTCTGTCAGCAGAGGAGGAGTGGCCTTTCCGTGAAGGCACCCCTGGGAAGTACGGGCCCTGGTTTTCTCAGCAGTTGAATTCACTCCGGAGTCTTGCCCGCTCACCGACCCCGGCTCTGCCTGGCCTTACGCTTGCCCAGCTGCCTGAGGGCGCGGGTGCCGATGCCGGCTGCCCCCCAGCACAACCGCGTGCGGGCCCCGGGCCCGGGAGGTGAACCAGCGCCCACCCTGCGCTCGGTGTCCCCGTCGGATGCTCGAGGTCTGTTCACACGATCCCACAGCACACGGCCAGCTGGGTGGAACCTCCACGCAGGCCCTGTGCCCGTCCTGTGGGCCCCGGTGAAGACAGGCCTCTGCTAGAATGTGCCCCGCAGCCCCGGCTGGGGTCGCAGCCTAAGTCCTGTCCCCCCAGTCTTCTGTGCCTGGGGCGCGACCCCGGGCTCAGGGGTCATGAGGGTGGGAGCAGTTTCTCTGCGGTCGGAACCAGCAGGCCCCCGCTCTTGGGCTCTGTCTCAGCTCTGCAGTCGGGGGTGGCCGTCGCTGCCTGGTCTCGCGTGCTCACGTGGCCCTGTCCCTCTGTGGCTTCCTGAGAGGCTGTGCTGGGCTCCTCTTCATCCCTGGGCACCGTGGTCACCTCCGCTCCAGGCTGCCCATCGCCGCCGCCTCCTGTTGTGAGTCCAGCCGCTGCTCACCTGTGGCCAGTGGCGTGGCCGTGCCAGGACCTCTGCCTGGGGCTGGCGTGTGCTGCGTCCTTACCCCGGTGCCCGTCTCCGTGGCTGCCCTGAGATTCGGAGCCCAGAGTGGACTGAGCCTTGAGCTCTGCGCTCTGGACGTGTGCCAAAGCAGAGCCTGTGACTCCGAACCTTGTCAGCTTTTAAATCAGGGAAATGTCTCTCTACACTCAGTATACGGGAAACGGCTGCCCGCCTCGCCCTGGGCCCGGGTCCTGGGGGTCTGAGAAGACTGTACCGGGAAGAGACCAGAGGAGTCCTCAGAGGCGCCGGCCCCCAGGGCCTGCTCTGCGTGGCCACTTGCTCTGCCCTGCGTGTGCCCCTCAGCAGCTCAGCTGGACGAGGCCCTGGCAGTGTGGCCCTGAGCTCACCCTGGGGCGGGCTCTCCATGACCCCTGCCCGCCTGCTCCGCCCGGAGACGCAGCCCAGGAGGGGGCCCCGCGCTCGTGAGGGCGTGAACATCTCACTTGGAAAAGGGATGCTGCCGAGCCAGGGGTTTATAATTTAATCCTTTAATGTTGTGTTCATTAACCTCTTAAAACGAGTGAGTCCTGAGTGCTCTTACACAGAGCCCGAGACACCCCCAAGCTCCCCCGGCCTCCAGCGCTGGGGTGCAGGCCCACATCCCCGGGGCTGGGTGCGCCCGCGGCTGAGGGGCGTCCCACGAGCCAGGCCTGGTCTCTGCAGGAGGAGCGGTGGCCTTGGCTCTCTACGGCCTTCACGTGTGTTTTAAAGTGACAGCCACACAACACAAACTCTTCGACCTGTAACTTAAAGATCATAAACTTCAGGCAATAATATTTTCTGTGTAAGCTTTTAAAATTATTTTTGGGGATCATAGCTTGTTTTATTTTGTGCTATAAAATTAACAGTATTAAATGACTTATATTCTTAGAACACACGGAGTGTCTTTTCTTACCAGATCAGTGCCTTTTTATTTTTGCACTCCGTTTTGCGTTGCTGGCCCCAGCCTCGGCCCTATGTCTCCGTGGCCTGTCTGTACATTGTCTCAATAAACGTGCGCCGCCGGTGGTGGCCGTGGCTCTGTGTGCGTGTCTGCTCAGCGCTGCCTGGAGGCGCGCCCGCCCCAGCGGCGACAGCCGTGCAGCAGTGGCCGCCTGCTGCTTGCGCTCGGCACCCAGCCCTGCAGCCCCGGACCCGGTGGGGGGAGACGGGGGCAGCAGTCCAGGCCTGGCACCCCCAGGGACCCTGGGCTGAGAGCGTCAGAGCAGGTCTGACGTTCAACCTGGCCTCGGAGCGTCCAGGGCAGGGCAGGGCAGGGACCCGGCTGCCTTTCTTGACTCCCGCGCCTCCCTGTCTGGCCTCCAGCTGGGGTGGGGGGGCCCGCCTCCTGATGGCCCTGCAGCCTGCAGCCCGTGCCATCCCTGCCCCTACTTGTGTGTCAAGAAGGTCTCCAGAAGCGGGGGTACCTGGCCATCTCACGCTCTGCCTCTAGGACCGCGGCTCTGGTCCTGGAAGGCGGCAGGTCTTGGAGATGCCTGTGAAGAGTCCTTGAAGCGTGAGAGGCCACAAACTCGGCAGC EMBV3_23147 ACCGACCTGCCAATGCCAAGAGGCACCCAATGTCTCCTTCGAGAACCGACCAGAAATGAA Gene BVV0102_273841 - 1 EMBV3_11220 GK000030.2:91236074-91245525 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220566 TCONS_00232830 TCONS_00118040 TCONS_00238581 TCONS_00219592 TCONS_00230720 TCONS_00145751 TCONS_00250203 TCONS_00196822 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00251626 TCONS_00174807 TCONS_00232829 TCONS_00132066 TCONS_00055559 TCONS_00080713 TCONS_00174805 TCONS_00206300 TCONS_00171428 TCONS_00180327 TCONS_00174806 TCONS_00036107 TCONS_00056149 TCONS_00118487 TCONS_00232824 TCONS_00125692 TCONS_00197394 TCONS_00007238 TCONS_00206299 TCONS_00238378 TCONS_00218430 TCONS_00246741 TCONS_00117924 29 XLOC_133883 XLOC_142312 XLOC_072206 XLOC_145248 XLOC_132911 XLOC_140210 XLOC_088920 XLOC_153146 XLOC_118487 XLOC_083377 XLOC_104695 XLOC_154567 XLOC_080699 XLOC_033367 XLOC_049597 XLOC_124877 XLOC_103815 XLOC_110095 XLOC_021081 XLOC_033952 XLOC_072644 XLOC_142307 XLOC_077234 XLOC_119055 XLOC_002800 XLOC_145045 XLOC_131750 XLOC_151107 XLOC_072090 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_21834 CAGTCCCAGATTGGTTTCATCGACTTCATTGTGGAGCCCACGTTCTCTGTGCTCACCGAT Gene GeneID:281970|PDE1B:NM_174415:13_cdna Constitutive 0 NULL GeneID:281970 5 GENE PDE1B MGC139720 phosphodiesterase 1B, calmodulin-dependent EMBV3_34756 ACTATCACTGAGCTTGATCACCACCATATTCTCTAGACTTGACTCTGAGTGACTTTTAGC Gene GeneID:282246|GUCY2F:NM_174549:7_cdna Constitutive 0 NULL GeneID:282246 X GENE GUCY2F NULL guanylate cyclase 2F, retinal EMBV3_33428 GCCTGAGGATGAGATTCTAACTGTCATGAATAGCAAGCAGCTACAGCAAACAAATCTGGC Gene GeneID:787564|LOC787564:XR_084727:68_cdna Constitutive 0 NULL GeneID:787564 15 PSEUDO LOC787564 NULL similar to Uncharacterized protein KIAA1377 EMBV3_03951 CAGGCAGTGACCTAAAAGAAATGTGTCGAGATGCTGCCCTCCTCTGTGTCAGAGAATATG Gene GeneID:506045|ATAD1:XM_002698369:155_cdna UTR3_Alt 4 NULL GeneID:506045 26 GENE ATAD1 NULL ATPase family, AAA domain containing 1 EMBV3_19737 ATGCTGCTGACCAGGAGGCAGCGAACGTTGCAAGCTTTATTTTGGAAGCTCACGCAGACA Gene GeneID:511467|PPIL2:NM_001038081:43_cdna Constitutive 1 NULL GeneID:511467 17 GENE PPIL2 MGC134547 peptidylprolyl isomerase (cyclophilin)-like 2 EMBV3_26573 CTGTCGAAACCTTGAGCTGAAATACCTGAACCTGGGGTAAGCAGTGGTCTGGTTTATGGC Gene BVT0102_060145 + 0 NULL GK000013.2:48449941-48476001 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045358 TCONS_00045356 TCONS_00045357 TCONS_00045359 1 XLOC_026420 Coding TCONS_00045356 XLOC_026420 Coding Coding TRMT6 13:48472412-48480485 j TSS33116 4733 1 TCONS_00045356_2 315 0.20811324741179 7 0.414519326065411 0.000615846685193853 0.000530752853089299 0.00062121483502545 0.000398967827871788 0.000485523055684802 0.000283718142987966 0.000370899532812791 0.0008183357653274 0.000696546078434133 0.000123603836915694 1.26076593999756e-05 0.000207658285438702 1.48751176868263e-05 3.40389705462079e-213 0.000169263858959361 0.00257802956986665 0.00106527177215804 0.00290231276825011 0.000558390377629647 0.000653154905812853 0.00020511987015538 0.00116888927896843 0.00144560923786643 0.0021272569127605 0.00063929842497766 0.000540053650465744 0.000476642418254536 0.000118961198871911 0.000117804754787217 0.000451748500372256 XM_005214564.1 TRMT6 PREDICTED: Bos taurus tRNA methyltransferase 6 homolog (S. cerevisiae) (TRMT6), transcript variant X1, mRNA. 0.0 5752 99.94 0.674624973589689 XM_005260721.1 TRMT6 PREDICTED: Homo sapiens tRNA methyltransferase 6 homolog (S. cerevisiae) (TRMT6), transcript variant X1, mRNA. 0.0 2031 85.56 0.373969997887175 TCONS_00045356_2 sp|Q2T9V5|TRM6_BOVIN TRM6_BOVIN tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; 0.0 653 100.00 0.996825396825397 1 coding 0 0 0 0 0.368712084052481 0.175310714333111 -0.0250692593747416 0.770183014012656 GTACGCTTTGTTTCCTTTCAAAAGTATAATTGGGGGAAAATATATCTTTAAGAAAGTCATGATTTTAAATAAAATGAAAATCTTGCTCATCTGCATAAAGTATCCTCCTACTTCATAAATTCCACATGAGATACGATACACTCGCCCAGATGTTGACATTGGGAAATATCCGTGCTGGCAATAAAATGATTGTGATGGAGACGTGTGCAGGCTTGGTGCTGGGTGCGATGATGGAACGAATGGGAGGTTTTGGCTCCATTATTCAGCTTTATCCTGGAGGTGGACCTGTTCGGGCAGCAACAGCATGTTTTGGTTTTCCAAAATCTTTCCTCAGTGGTCTTTATGAATTCCCCCTCAACAAAGTGGACAGTCTCTTAAATGGTACATTTTCTGCCGAGATGTTGTCTTCAGAGCCAAAAGACATTGCTTCAGTTGAAGAAAGTAATGGCACACTGGAGGAAAAACAGACTTCTGAACAAGAGAATGAAGATAGCATAGCAGAGGCCCCAGAGAGCAATCACCCAGAAGAACAAGAAAGAATGGAAATTGTCTCTCAAGATCCAGACTATAAGGAGCCTAAAGAGAGTGGAAGTAAAAAGGATTATATTCAGGAAAAGCAGAGGAGACAAGAAGAGCAGAAGAAAAGACATTTAGAGGCTGCTGCTCTGCTGAGTGAAAGAAACGCAGATGGGTTAATTGTAGCTAGTCGTTTCCATCCCACTCCACTGCTGCTGTCTTTGCTGGACTTTGTGGCTCCTTCAAGGCCATTCGTGGTCTACTGTCAGTATAAAGAGCCTCTGTTGGAGTGCTACACAAAACTTCGGGAAAGAGGAGGGGTCATCAACCTCAGGCTGTCTGAAACCTGGCTCAGAAATTACCAGGTTTTGCCAGATCGAAGTCATCCCAAACTACTGATGAGCGGAGGTGGAGGGTACCTTCTCTCAGGCTTCACTGTTGCCATGGACAACCTTAAAGCAGACCCCAGTCTCAAATCTAGCACCAGCACTTTAGAATCTCACAAGACTGAAGAGCCAGCAGCTAAAAAACGGAAATGCCCAGAATCTGACTCTTAACCTTTTAAAAATTGCTTTGATTTTTGTTCTCAGACACTATACAGTTAGTAAGTAAACCTTAAATGACATTACTAATTGTGTTTTCATATCCTAAGAATAAGAACTTGTTTATACACCTGTTCCCAGGAAGGACAAGTAAGCCTTTTGTCCACCTCTGACATAGCTAGGTTTGGACTGTCGAAACCTTGAGCTGAAATACCTGAACCTGGGGTAAGCAGTGGTCTGGTTTATGGCCAATTCTGTTTATTTCACAAAAATCTTTAAGTCCTTTCAGTACTCTGTGCAAATTTCTTGAGAATTTAGAGATCAAAGAAATATATTTATACAAAGTTTTGTTTATATGTTAAGCTAAGTGGAATAACACACCATCAGTGAAACTTGGGTACTATAAAGAAGGAATTTGTGGAAGAAATTTCCTCTCTTCATTACGTTCTCTTCAACCTAAGCAATATGAATGAGTGTGAGATTTACAGTACCAAAAATGTCCATCCTTTTCCTTTCAATGGAATAAACTTTTAAAAAATATTTTACTATTTTAATAGTTGATGACCTGGAAAAACTCTTGAGTATTTATTTTATTGCTGTTTTTGTCAGTAGGTGTAGTAGGGTACTTCTTTGCATTGATTTGCCAAACCTCTCATTCTTTTGTTCCAAATAAAGTGACTAGAATTTTTATGTGCTATTAAAGGAAGCAAATGGTTTTTTCTCTCCCCAGAGACTTATGGAGATAGATACATGTATGTGAATATTAGTATATGCACATATATATATTTATATACACACACATGCACATGGAGACAGAATGCACTGTCTGTATGAACTATAACAAAGTTTAGTGCAGGGCTTAGACCAGTCCTCATTGCATTAGTGTCACTCCTTGTCAAATGTATTTTAAAGTGCCTTTTTTGGTGATTATTAATGCTGGTTTGTTGAGCTCTGGCATGACTGGGGGTTAGCCTTTCTAAGCTCTGAAAAAAAGTGTAATCAAATTATTTTGGTCATTTGCTGCAGCCAAGAAAAAATGTTTAGAGGAAGTCAAGGCTCTTGTCCATTGAGAATCTGAGTCTTGCTCATTAAACATGTTCATCATGTATGTTGTTAATGTCATTATAGAATAGATGTGGATCATCCAGCAAGGAGCATCTCAAAAAGAAAAAAAGATTGCTCTTTCCTAATAGCATGTACTGTTCTAAAAATGGCCAGTGGTGATAACCAACAAGTACAGTTCTGATTCCTCTTTCTTAAAACAATTGCTTTTAAGGAACAAAAGCATTTCGTACTATGATCTGTCTGACTTATATTAATGATGCAGTTAGTGATGCCACCTTCATTCGCTTTCAGCTGATTGTGACACATGGTCTGTGTAAGAAAACATGCCTGGATTGGCATCTCCAATCCAGGCATGGATTCACTGAACATGTGATCTCACTGAACATGTCCATGAAAACAGTTGTCACCCTCATGCATCCAGTCAAGTCTGGTCAAAGAGAACACAATATATGCACAGACAGATTCAGTAGTGGTTGGTCTCCACTGGTCACTGTTGTTAGAACCATATCCTACTTGAAACTCAACCAGTTTTCAAGTCCGATCTCATTCAATTCAGTCTAGGGGTCTGCACTGCCAAGGCCCTGTGTGCCCATATAGCTACCCTGGAGTTGACTTGTGAACTTAATGCACCAGGTTTATCTATTACTGTTTCTCATTCATGTAATTTACTTAATCTTTGAGTACTGATGATTTAATTCAGTGGTTTGAAGATTTAGTGTGCACCAGAATCCCCTCATGGGCTTATTAAAACACAGATTGTTGAGCTCCACTGAGTTTCTAAGTAAGTCTGTGATGGGGCAGAAGATTCACATTTCTAAGTTTCCAGGTGACACTGGTGCTGCTGGAGCATAACCAACTACTTGAGAAACATTTATGTGTGGACACCCAAATCACATGTGTCTTGTTTGTAAAATGGACATCACCTTTGGAGCAGATAAGTGGGTAATTCTATGGCTACTGGACATCCAGTCACCAGGAGAGTTATGCGAAATAGCACTTTAATGAGTGGCCATCAAAAAGTAAAGACAATCATTAATAATGTCCATCATACTCTTCATTTGATTAGGGTACTTGGAAATATAATGTGTTAATTAGATTTTTTTAGCTTAAAGGTGTACTAAAATTGTATGAAGCAATTTTTTTCAGCTTTATTGAGTTATAACTGACATAATATTTTGTAAGCTTAAGGTGTTCGTGTGTTGATTTGATACACATATATTGCAGAATTATTATCACCATAGCATTAACTAACACCTCCACCTGTGACATAATTACCATTTTTGTGGGGGTGGGGGAAGGACATTAAAATTTTACTATCATAGAGCCTGTACAGGGCTGGCCAAAGCATGTCGGGAGCAGGCTCTGAGGCCGCTGGGCCCCAGCTGCCACCTTGGACATTAAATTTTTAGAAGTTATCAGACTTTTCTGTGCAGTTCTACCAGAAATTCAGAAACCTGAAAGGAAAATCCAGTTTAGAGAGAAGGTTCGAAGGATTGCTGTAACTCTCTTCATATTCTTAGTATGTTGTCAGATACCACTCCGTGGAATCATGTCATCAGATTCTGTAGATCCTTTCTACTGTATGAGAGTTATTCTTGCATCCAAAGAGGAACTCTAATGGAATTGGGTATCTCCTCAATTGTTACATCTGTTTGATCATGCAGTTGTTAGCTGGAACCAAAATCATTGAAATTGGAGTACATGAGACAGAACCTTGTTCAGTGGAGCTCAGAAATTTGGTACAATCATTACCATTGGGTAAGCCATGGTTGTATGTATGTCATGATGGGCATGTATGGGGATCTGCTGAAATGGATGCTGGAATCTGTCTCCTTATCATTCAGGATGTTTTCTCAGACTTGGTCTCTTACCTGTGCTGTCAGCCAGGTGGCTGTCATGATGGTAGTCACTGCCTGCATCTGTATGTCAGCTTGGTCACATTTATATTGTTCCTTATGTCACTGGGTTACGTACATTGTTGGTACAACATGCTCTTGAGTTTAATTGCTATTTAAAATGTCTCCCAACAGTCTGCTGTAATTTGTTATTGAAATAAAGTTACTGTGTATAAACAGGCACAGAGCAAGCCAGATGATAAAAATCTAAGTCTAAACTTTTTTTATAAGCAGACAGTAAAAATTCTTTGTAATGGGTTAAAAAAAAGTTTACTCTCAACAACTTTTAGGTATATAACTATGATTAACTATAATCACCATTTTGTTGTTGTCCAGTCGCGAAGTCACGTCCAACTTTTTTCAACCCCGTCCATGTACTGCAGCATGCCAGGCTTCCCTGTCCCCCACTATCTCCCAGAGTTTGCATCCACATCTGCTGAGTCAGTGGATCCTGTCTAACCATCTCATCCTCTGCTGCCCTCTTTTCCTTTTGCCCTTGTTCTTTTCCAGCATCAGGGTCTTTTCCAGCATGTCAGCTGTTCACATCAGGTAGCCAAAGTATTGGAGCTTCAGCTTCAGCATCAGTCTTTCCAATGAATATTCAGGGTTGATTTCCTTTAGGATTGACTGGTTTGATCTTGCAGTCCAAGGGACTCTCAAGAATCTTCTCCAGCACCACAATTCTAAAGCATCAATTATGTAGTTTTCCTTATGG EMBV3_17959 GGAAATACATGGCCTGCTGCCTGTTGTACCGTGGTGATGTGGTTCCCAAAGATGTCAATG Gene GeneID:504244|TUBA1C:NM_001034204:29_cdna Constitutive 0 NULL GeneID:504244 5 GENE TUBA1C MGC126961 TUBA1 TUBA4A tubulin, alpha 1c EMBV3_12736 AAGCTGTGGACCGGGCGACCTTAACCATCGACAAGCATAACCGACGAATGAAGAAACTGA Gene GeneID:618546|SNAP47:NM_001102320:26_cdna Constitutive 0 NULL GeneID:618546 7 GENE SNAP47 C1orf142 C7H1orf142 MGC151654 synaptosomal-associated protein, 47kDa EMBV3_36738 TGAGCTGAGCGGACCTGGAGGAGGCAGCAGAGGATGGAGTTCAGTGGAGGAGGACTGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00695 CCTTTCCAGTTGGCAGCTATAACCACTGAGCAGAGAAGTGTGGCTTAACTAGGTTCAGAC Gene GeneID:613705|LOC613705:XM_002699533:12_cdna Constitutive 1 NULL GeneID:613705 X GENE LOC613705 NULL similar to RNA binding motif protein, X-linked 2 EMBV3_23312 GAAGTAAAGAAGATCAACAATGCTCACACCGGAGGAGGAGGACGGCCAGTGGAAGGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33442 GCTGTGAGCCCACCTGCTAAAAGCCAGGTTGCTGATTTTCAACTTGAAAGTTCAACTTCC Gene GeneID:514995|KRTAP1-1:NM_001105369:136_cdna Constitutive 0 NULL GeneID:514995 19 GENE KRTAP1-1 NULL keratin associated protein 1-1 EMBV3_08065 TTGTATTGGATTCATTCTCAGGGGGGCTCTTTCCTTGTGGTGGAGGATGGTCACTAGCAG Gene GeneID:515280|LOC515280:XM_002697998:91_cdna Constitutive 0 NULL GeneID:515280 25 GENE LOC515280 NULL similar to hepatocellular carcinoma antigen gene 520 EMBV3_00455 CCTTGCTCCATATCTATCTTGGGAATCGTTGGCAAGTAAGGAGGCTTACCCTGGTGTTGG Gene BVT0102_179423 + 0 NULL GK000015.2:77339259-77442436 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37858 TGACTGTGCTACCCCTTTTCACATCAAAGAATGGAGAACTACTGACAACGTAGGCCGCGC Gene GeneID:282386|TMSB4X:NM_001002885:2_cdna Constitutive 0 NULL GeneID:282386 X GENE TMSB4X NULL thymosin beta 4, X-linked EMBV3_05855 CCTTTCACAGTATGCATTAGAAACAAAAGCCCGCTTGCTCGCTTGCTGGAACACAGGGGC Gene GeneID:541268|DAB2IP:NM_001144082:201_cdna Constitutive 0 NULL GeneID:541268 11 GENE DAB2IP MGC166305 DAB2 interacting protein EMBV3_05768 CAGTGTTCCCAGTCAGCTGTCCCGCTACTCAGAGCTGAGTGACCTTCGGTGGATTCATCT Gene BVT0101_045752 + 0 NULL GK000010.2:50931423-51020032 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013938 1 XLOC_008221 NonCoding TCONS_00013938 XLOC_008221 NonCoding NonCoding - 10:50946257-50952739 - TSS10219 415 1 TCONS_00013938_1 37 2 0.936275266162629 0.000950758547590478 0.000677965659832711 0.000423676819974916 8.00400252112265e-05 0.00266487982907504 0.000172388486942087 0.00047777906635817 0.000285046886273691 0.000551359477746338 0.000218117581730015 1.65483187755441e-05 0.000473885193499333 0.000186676334573362 0.000192694022235577 5.91108530739806e-05 0 0 0 0.000673894623625166 0.000363902827443151 2.92600305306156e-05 0 0 0 0.000584328658919435 8.48852297925124e-05 0.000112947418580324 0 2.3395703736243e-05 0 0 noncoding 0 0 0 0 0.157666832635858 0.346530618065477 -0.0497588857261301 0.347495606179464 GCCGGGGGAGGTTGCATGCTGGCACACCAGCAGAAGCCCCGAGGGACTGTTTGGGGGAGCTGGGGTGGAGCACACATTGCCAGGGGGCAGTGTTCCCAGTCAGCTGTCCCGCTACTCAGAGCTGAGTGACCTTCGGTGGATTCATCTCTCTGCCCCCTCCCCACCCTTCTCTCATCTTTAAAAGGAGGGGCTCGGGTTCTTTGCAGTTCCGGGGTGCTGCCATGGTACTGTGAGCTGAGAAGGGTCCCCCAAGTACTGCAGGTGCCGGACATACAAGCCTTAGTCACTACCAGGAGTTTCCATTAATTTGCTCTCAAAGTGGTAAGCAAGAAAATTACCAGGAACATACTGGTTGATAAACATCGAAAGACCTGAAGTTTTCAGTCTCTGTTAAGGCAAAATTGGTATTTGTGGA TCONS_00017243 TCONS_00017244 TCONS_00017241 TCONS_00017242 r 5' 14755 TCONS_00017243 TCONS_00017244 TCONS_00017241 TCONS_00017242 r 5' 14755 EMBV3_29823 GGCTTCCCCAGTGGACTGTTCAACTTCCCACCAAATCCATGAAGCCTGAATGAACACTTG Gene GeneID:524166|RNF144B:NM_001099028:104_cdna Constitutive 2 NULL GeneID:524166 23 GENE RNF144B MGC157214 ring finger protein 144B EMBV3_16209 GACCTCGTCTACTTCGAGAAGTCGCCCAACTTCTGCACGTACAGCGGACGCCTGGGTACT Gene GeneID:540662|WNT1:NM_001114191:113_cdna Constitutive 0 NULL GeneID:540662 5 GENE WNT1 NULL wingless-type MMTV integration site family, member 1 EMBV3_09631 GGATCCCTGATCCCTTACTGCTAAGGATTATTTACACACCCCATCAGCCAGGCTCCTCTT Gene BVT0102_208377 + 0 NULL GK000025.2:27018794-27034799 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144909 1 XLOC_088690 Coding TCONS_00144909 XLOC_088690 Coding Coding PRR14 25:27032385-27036652 j TSS108706 2135 3 TCONS_00144909_4 222 6 0.500937646507267 0.000771608639895136 0.000259842959893095 0.00055487691961855 0.000325613468353892 0.00167797307716796 0.000392105092000134 0.000267895549215037 0.000740508125537556 0.000123200685864451 4.61538286104532e-06 1.75773806929561e-06 9.48903530758981e-05 0.000143417294059631 4.34528702516119e-05 0.000199917627903777 0.000331770535984246 0 6.75841256216122e-81 0.000234876255495297 0.000199559326396347 0.000365745435322894 7.73395452284693e-05 4.65104796944372e-20 6.2754992985898e-05 0.00116453104204518 0.00100248469347401 0.000306688425780831 6.35873183059632e-06 2.80411906078742e-179 1.24949191313429e-44 XM_005224921.1 PRR14 PREDICTED: Bos taurus proline rich 14 (PRR14), transcript variant 0.0 1465 95.55 0.42903981264637 NM_024031.2 PRR14 Homo sapiens proline rich 14 (PRR14), mRNA. 2e-166 590 84.42 0.25152224824356 TCONS_00144909_5 sp|Q0VBZ8|PRR14_BOVIN PRR14_BOVIN Proline-rich protein 14; 2e-109 328 100.00 0.994011976047904 0 noncoding 0 0 0 0 0.115146123187042 0.490873941227978 0.020539938792287 0.798892220469499 GTTACAAAGAGGGGTGAGGCAGGACTGTGAGGGTACGAAGGCTCATCACTGTTGGCCTGAGTTGAGGGCCAAGCCCTCCCCAACCAGATTCTCAGAAACCAGGCCCTTTCTTTAGCCTACTTCCTTTACCCTTGGCATTGACTTCTTCAGCAGACTTAGAGAATCAAAACTCAGATCAGGTTTGCTCTGCCCTTGAAAGCGTTTCATTAACCTGCAATCTGGGAAATACCTCTGTGTTTAAGCAGGCAGGTTTAAGTGAAAGCCTACAGGAGGCCTCTCAATTTACCAAGATGGAGAGGGATCTCTACTTAGAGCTGGATGCATTGCCATACCAGCAGGGACCCTCCTCATGCACCTGTGTAGCCAGCCCTGCTCCAGGGGAAGATAGAACACTTCTAGTTGAACCAGTTGTTGCTTATTCTCACCAGAAGTCTCATGATGGATTTCCAGAGGACCCAGCCAGCCTTGTACTACAGAGAGTGGCTGTAGTCCTAGGACACCTATCTGGTTGAGTCTTTCGTTACAGAGTTGGGGAGTCTTCACGTCCCACACCAACACTAACCAGTGCTGGTCTTTTTACATCATCCTTTCTGGGTCATTACTCTTATTACTCAATCCCATAGAAGAGAATTATGTTGGGCCGAGTCTTAATCTTCATTCAGGCCCGATTTTAGGCTTTAGTCTTTTTTGTTCTATCAGGAAAAATAAGTACTAGTTTGTACCAGCGAATCCTAGGGAAAGAGAACTAGTGGAGGCATGGGCTTTGGTAAAGCAGTGGGGGCGCGTTCACAGTCCAGAAGCCAGTACAAGCCCATTACCTACCCCCAACAGCAGGCTCCTGGTTTAAAAGTTTCACGAAGCAGCCTCTCTAAGCAGCAGGATCCCTGATCCCTTACTGCTAAGGATTATTTACACACCCCATCAGCCAGGCTCCTCTTCAGAGTGCTCGTGGGAACCCGTCCTCTATAGAAACCTCTCCTGTAGGAAGAGGTACATAACAGTCGGGTGAAGTGAACGCCCCAGCCTCCTCCTCACTTTGACTCAGCCCAGGCTCTCCAGGACACCGTGCGAGCAAAGAAGCTTGAGTCGGCACCAGCGCTAATCTCTGGCCCCGACCACCTCCTGCCAAACTTTTCCCTGGCAACCTGGTAACGTGATTCAGGAACCTAGAATGGAACTGGAAACCGACTCAATGGGGCCTCTCTAGGAAACTTTCACATATCGTTAGCACTCACTTCACGTTTATTGGTCTAAGAACGAAAGAACCGGAAGATGCCCTTAAAAAACGTGGCGGTAGTCTAGCTTCACCAGAGTTGTCTCAGTAGCTCTAGAAACTTGCCCTAGACTTCGGCCACTCGCCGGCCAGAAAAGAAGACGCCGTGCGGTCCACTTTAAGTTAATCGAGGACAGCACAATCTGGGTTCAACTATAATGGCGGCACCGCCCAATTGGCTTCTTACCCCTAGGCATGATGGCCGCCAGGCGGCTTCAGTTAGTTTCTCACCACCCCGGAAGACCAGGACCGGCGATTGGGCGGTGCCCAAAGGCTCCGAGAAGAAGGCCCTCGGCGGTTGGGCAGTGCTGGGCTGGAACCTGGGATCCCCCAGGGACTCCCCGGAGCCGCCGCTTCCCCCATGGACTTGCCCGGGGACTCCAGCACGCCTGGCCGGCAGCGTCTGTGCCGCCAACCCCATGCTGGAGCATTATGGGGAGCCAAGAGCCCAAAACGGCCGAAACTGCAGCCTCTCGGGGCCCCTTCGCCCTTGGAAAAAGCCTCTCGGCGGGTCCTGGCCGTGGTCCTGGAAGATGTCATGGCTGCCCGCATGGTCCCCCTGGAGCCCCAAGAAGAGAGTTCCACCCCACGACACCACAGCAACCATCGGGATTCTGTTCGCAGCCAGCCGCCTGCCTCACCACCCCGGCAGGCCATGTGGTCCCCACAAGCCAGGCCTCCCGACCCATTGCACCTATGTCGAGAGCCCTTGAGCCGTATCCGTCGGCCCCCTTCCACCCCAAGGCGGCAATCAAGGACAACACCTGGCCCAGACGAGGGGCCTTCACAAAAGGTGGACCAGGTGCACCAGCCCACCCTGGTGGTGATGCTGCAGGACATTGCCAGCTCCAGACCCCGAGCC EMBV3_26909 GCTGACCCAGGTGGCGGAGCAGTTCTCAAGTGGAAGGACTAAAAGTGGTGGAGATTGAGA Variant GeneID:511665|PDE9A:XM_002685134:98_cdna 387^457 2 EMBV3_32399 GeneID:511665 1 GENE PDE9A NULL phosphodiesterase 9A EMBV3_06221 CACGGTTAAATGCCACTTCTGTTTTGAGATTATGGCCCCTTATTATTGGCTGCTGGACCC Gene GeneID:618573|RALGAPA1:NM_001083525:59_cdna UTR3_Alt 2 NULL GeneID:618573 21 GENE RALGAPA1 GARNL1 MGC142841 Ral GTPase activating protein, alpha subunit 1 (catalytic) EMBV3_24978 TGAGCTTTAAGTTTGGTGGTGGCATTCTGAGCATTAGACCTCTTACAAACGACATCTCTG Gene BVT0102_041734 + 0 NULL GK000008.2:1559648-1697552 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226763 1 XLOC_138072 Coding TCONS_00226763 XLOC_138072 Coding Coding MFAP3L 8:1692391-1744023 j TSS169445 6622 1 TCONS_00226763_3 400 0.059951676230746 3 0.87180182448529 0.00154583747555726 0.000796103054673515 0.000540147602817126 0.000619453859263614 0.000274094997293079 0.000245339828745027 0.000523253620712926 0.00043160874266482 0.000796578852066808 0.00114525388006873 0.000451258098648076 0.000238744817171088 5.56543980956933e-05 0.000121860742954303 0.000109232738876557 0.00871736999810491 0.00119442577671783 0.0034186218068552 0.00067570800219274 0.00080577396646727 0.000307221597079632 0.00105848431414011 0.0019316604614019 0.0029811478104124 0.000272491938134173 0.000780075521042074 0.000321010786579567 0.000468392292899364 0.000316193164276103 0.000477025820927019 XM_005209798.1 MFAP3L PREDICTED: Bos taurus microfibrillar-associated protein 3-like (MFAP3L), transcript variant X2, mRNA. 0.0 1.194e+04 100.00 0.999848988221081 NM_021647.6 MFAP3L Homo sapiens microfibrillar-associated protein 3-like (MFAP3L), 0.0 1119 71.10 0.338115372999094 TCONS_00226763_3 sp|O75121|MFA3L_HUMAN MFA3L_HUMAN Microfibrillar-associated protein 3-like; 0.0 645 78.64 0.9975 5 coding 0 0 0 0 0.0142758533934002 0.947420769825195 0.017511216336811 0.728597218046791 CCGCACATCAGCCGGCGCGGGGGCAGGGACAGCCGCCGAGAGGCTGCGGGCGTCGACACGGCGTGGCTCCCGGGCTGGCCATGGCGAGGAGCGCACGGCAGCCGCCGGAGTGGCGAGGCGGCGTCAGGTTTTTAATCAGGAGCCAACTCCATGGAGCCAGGCCAGGTTTGGCCCCTGGCCTGCTATGAGCAGAGTGTCACCCACTAGAGGATTCCCCCGGCCAGCTGGCTCTGCCTCCGTAAAGAACAAGCGAAGAAGATGGATGGAGTGAAGAGACATCTGCCTGTGTGCTTCCTGCCTCCTGTGCCCTTGTTAATCCTAGTATCCACTCTGGCGACCGCCAGCAGTGTGACCAGCAGCACTTTAAATGGCACCAACGTGGCTGTGGGCTTGGCGCCCGTGGTCGTTGCCAGAACCGACCATATCATCGTCAAGGAAGGGAACAGTGCCTTGATCAACTGCAGTGTCTCCGGCCTTCCCGAACCCCAGTTCAAGTGGTACAATTCGGCGGGCAAACTGCTGAGTGAGAACGAGGAGGATCAAGGGGGAGGAAAGTGGCAGATGCATGACGGCCTCCTGAACATCACCAAGGTGTCCTTCTCAGACCGAGGGAGATACACGTGCATGGCCTCCAACGTGCACGGTTCTGTGAACAACACGGTGACGCTGCGGGTGGTCTTCACGTCGGGTGACATGGGTGTGTACTACATGGTGGTGTGCCTGGTGGCCTTCGCCGTCGTGCTGGTGCTCAACGTCACCCGCCTCTGCATGATGAGCAGCCACCTGAAGAAGACCGAGAAGGCCATCAACGAGTTCTTCCGCACGGAGGGCGCTGAGAAGCTGCAGAAGGCCTTCGAGATCGCTAAGCGCATCCCAATCATCACCTCAGCCAAGACGCTGGAGCTGGCCAAGGTCACGCAGTTCAAGACAATGGAGTTCGCCCGCTACATCGAGGAGCTGGCACGCAGTGTGCCGCTGCCCCCACTCATCATGAACTGCAGGACCATCGTGGAGGAGCTCATGGAAGTGGTGGGCCTGGATGAGCATGGCCACCAGAACTTCGTGCGCCACACGCCTGAGGGCCAGGAGGCCGCAGCCGCCGACGGGGACGAGGTCTACACCATCCCCGACGCCGACTCTGATGCCTCGTCGCTGCACGAGCAGCCCCAGCAGATCGCCATCGAGGTGTCTGTGCACCCCCCAGCCCACCGGGAGCCCTCAGACGACCGGGCCGCCGGGGCCCTCGAGGCCGGAGACGAGGAGGACACCGAGCCGTCGGCCGAGCACTCCCCGGAGTCCGCCGCGCCCTCCACCGAGGTCACGTCAGCAGCGCTGACCTCCGAGGAACCAACGCCCGTTGAGGTGCCGGACCACGTCCTGCCTCCTGGTCTGCTAGAGGCCGCGGAGCCAGCCAGGCCGCGGGACGGAAGCACCCATGTCGTCTATGAAAGCCATGTCTAACAGTGTACCCCCCAACCCTGAAGCTATGCACACCCCGAGATTCAGGGCCACCCCTCGGGACAGATGCAGGCCGCCCTCGCCGCTAAGCCTTACCGGAGACGCCAGTCGTAGGTAGGAGTCTGGCCCCGCACGCACGCACGTATGAGTCAGGCCCCCGCACGCACGCCCCAGTCGACCCCCAGCCAAGGGGAATGCGAGCATCGTCGGGGAGCGGGGTGGTGACCTTGGGCAGGTGTCTGTCCACATGACACGAACCTCAGAGGCTCTTCTCCGCCAGATAACCTTAACCGCTGCTGCCCTTTTGGCAGAGAACACTGACTGTCAGAGACTCTGAGTTCACAGCCCTGCCTGGGGCACAGGGCGCCGCTCTTCTTTTGAAAAATGGGTCTGCTAAGGGAGCAGCTGTAGTCCATCCCTCCGCGGCTCTGTTGCACTTTCTTCTCAGTTTTGCCCCATCACTGTCGCTTTATAACCCAGGCGTTGTGACTTGAATGCTGACCGTTCCTGCGGGTCTTGTTCCCTTGGCCACTCTGTCCTTATTCCCGCCCCCCACCCCCACCGTCTAACGCACACCCCAGACTTTTACCTCCCAGGCTTTGGTGTCAGGGCTGATTCCCACGAGTCATCTTAACATTCCAAAGCAGCTAGCTACCAGCCTCCTGATGTTTGTCGTTTCCCAGGCCTGTCTCCATCGTTGCTTTTTTTGTTCGTTCGTTTCCAGTGAAGCTGCTGTGGTGAAACTGAGAGAAGAAAAAAAATAAAACCTTGCCCAGGAATAGCACTTTAATAGCCAAATAAAAATAGGTTTACCCGTCCCATTCTGAGAGCCTTTGGGTGAGCTCAGCTGAGGTTGGAGGGAGACCATGAACTTGAATCTGCCCAGACTGCCCGTGGAAAGCCCTGTTCTTATGTCTAAGCAGTGTCCCCCTCCAAGCCAGCTGCTGCTTCATCTGGAAGGTGTATCACCTCCAGAGACAGAGGCGCCTGAGGAATCTGTTTAAGTGGGGAGCGTGGGGCTCCCGCCACGCTGCCATGGACCACGGATGTCAGAGGACCCCAATGCTTGGGTTAGGGCAGCAAGCGTGAGGGTCCTGGGGGTCGCCCCACCAGGCCCACTCCTGTTAACTGCATGGCTGACTTGTCCATCCTTGAAGGGGACAGAGACAGGTTAGGATAATGGCATCATCATGCCAGCATTCTTGAATTCATTTTTAGCCCCCAAAGAAGGCAGCTGTATGTGAGGCCAGAGTGATGTTCTAGAAAGAAGCCGAAGCTAGTTGCCTCAGGCCCACACCTCACTGGCCTGTGCTGGTAACCACTGTGGGCTTTGTGCAAGTGGGGGGCACCCCACGCACTCCCCGGCTCCATCTAAGGGCTTCCCTTGCCCACATTACCAAACCAGCATCATCACCCTGCCCTTCTCCACAATTGCTTTCAGGTTTCCACTGTCCTCTGTGGTTCTTCTAACATTTTTTATGCTGAAAATCAGTACTGTTGCAAATTCAAGGAACCAGCTTACAAAACTCAAAGCTTTTTAAGACAGTTGTGGATCTTCTGCCCCCAAAAGCATTAGAGCAACGTCTGCAGTTTAGATGTAACCATGAAAAGGAGAGGTATAATTTCCTTGCCATTTATGAGCAGGAGTGCCATAACCTTGAGGTCGTCATGAGTGTCATGGCCACGTCATGGGTCCACAAAGGTCCCTTGGGCTGCACGGTTGGTGAACAGACCCAAGGCTTAGTCCTCACGTCCTCACTGTCTGCGTGAGTGAGACTTCACTGCGTCCCTGGGTTGAATCTTTCTCGTCTGCCAAACACGGAGGTGGTACTTGGGTCCCCAGATCCCACCTGGTTCTGACATTTAGAGTTTTGTGGAAAGTTTGTCATCTCCCATGATGGCCCCCCTTACACGAGACAAGGAGTCTTAGGAGCAGAAATGGGCCTGTGATGTTATTAGATGCTTTTGCTGCCAACTTTTTCAGGAAACTCATCTGGGTCTGGAGCTGAGAACAGAGGGCTTGGCTTCAGTGGCTTTTCTATGTAGAGATAACTGATGTGAAAGGTGGTCTGACACACACACAGTTGGGTCAGATTCCTCTTGGCCTCAGATGACCCATTGCCATCAGTTTGGAGTGTCTTGGGTGGTCACCTAAAACATGAGAAGTGAACAGTCCAGAGAAACCTTGACCCCCGCATGGGCTCCCTGGACAAAGGTTTTCTGTATTTGGCCTGTGGAGAAGTTTAATCATACGTCTTAGAATGTAAACATTTTTCCACTTGTGGAGGTCAGCAGATCCTTACCATGGATCTGTGCACCCAAAGCCACAATAGGGGGTCCCCAAATAAACTTTTTCCCATTCCGTCCCCTTCTCCCTCCACCGAAACCCACATACAGGTTTCCACGTGGAAATGACAGGAGAAGGCATCTCCCACCTGGATGTCGGATACAGATAGTTAAACACAGGCAGATTTTTCTTAAAGCAGGAGCAGAACTGAGTGACCAAAGAATGTTTTCAGGTTGGTTTTAGCTTCTTTAGACTGGGGAGATTATGTAGATTTTTAAAATGTTCCCCTTTAAGGCATCAGAAAGCTCTTGATAGAATAATATTAATAGCCAACCAGAGATGAGGCTGGCTTACTACAAAGATGTCTCTGTCTCTTCTTGTTTATGCTATAGCTTCTTTACGAAATAGAAATGCTGTCCCACTAGAATACGGGACAGAGACAGTCTCATGACTTTCGCCTGGTTTTTCAAAGATAAATTGTTCAGCTTCATAGAAATTTATAGAAGTATGGCTACATATGGCTCTTTGGGGCAGTTTTGCAGCTTAACACTGAATCCCAAGCCATGTCCTTTGGGTCTTAGGTCATTCTTCTCAAAAGCAAGCAGTTTCTGGTTTCCAAGTCAGCTGGTCATATCTATAACAATTTTTTTCTTGAAGTTCTGAAAATGATTCAGATATGTGTGCATATTTAATTCACTGCAATGACCTATAAACTTGGATGGTATTTATTCTAAATGGGGGAAAAACAATTTTATATTGCAAATCTATGTAATTTATAATGGTTTTGTTTTATATATATTTTCATATCTTTAGGGCACATCTACTATTCTCATCTTTTTGTATATCATACTTGACAAAACGAGATACTAATACTTGACTAAATCTCTAGGAACCAAATGTGACATCTGTAACATATAGAAATTGCTCTAGAAACACCTGAATGTCCTCGCTCGTCCTGAGCATTACTGTACTGTCATTACACCCAGAATGATTGCTGATGGGCGTTTGTGTTTTTTTCCCCAAAGCCAAGGCCAAAAGTCCTGACCTACCACACAGTGGAGTCTGGAATCCTTTGCTTCTTTATTGTGTGTTTCATTTTTAACTGTAGACATCTGTGTTGTTCAGACTTCCTTTGAAGGGCACATGTGATAAGAAAGCAGTTTGGTGGAGACTGGGCTTGAATGATGGCTATGTAGCTTATTCACTGGACTGATAACATTTCAAATATAATACATGGATTGTTACTTATTGGTAACCTTGAATCTGTTCAGCTCTTTAGCCCATGAAGAAAGCGTAAGGCAGAAAGAATGTTTGCCTGTTTTGAACAGATAGCCTCTAAATGTAGTGCCACCGACACAAACCAGCTCAACCCTAGAGACCCCAATCCCTGCTGGCTGAGGAGCTGTTTCAGAAAGGCAAACCAGCCCACCTGTATGTGCAGGTTGAATTTCAGTCTTATGCCAGGGCTTCCCTGGTGTCTCATACAGTAAAAAATCTGCCTACAACACGGGAGACCTGGGTTCAGTCCCTGGGTGGGGAAGATCCCCTGGAGAAGGGAATGGCAACCCACGCCAGTATTCTTGCCTGGGGAATCCCATGGATGGAGGACCCTAGCAGGCTTCAGTTCACGGGATCACAAAGAGGCGGACACGACTGTGTGACTGCCACTTTTACTTTTTCACCAGTGCTCAAACTCCTCACAGCCCCAGTCGTTCTGTGAACAGGGGTTTCGTCTCAGTGTTTCATTGGGTGAGAAAACACAGCATTTCACGTATCTTTCAGATACTCTGTTTTATACTCAGCACAGTTCAATGACTACCCAGTATCCATCTTCACACACCCTTTTTGCATTTCCTTTACGTCATAATCCCTGTTTCTGTTCTGGCTCTTTAGACTAATTCATTGGTACTCTTTAAATAGCCACCAAATCTCATTGTATAGTCACCCACATATTTTGATCTCTGTTGTTTCCAAGGTTGGGTGTCTCTAGTGGCTCAGCAGTAAAGAATCCACCTGCAATGCAGGAAATGCGAGTTTGATCCCTGGGTAGGGAAGATCCCCTGGAGAAGGGAATGGCAACCCACTCCAGTATTCTCACCTGGAGAATCCCATGGACAGAGGAGACTGGCGGGCTACAGGGGCAAAGAGTTGGATAAAACTTAGCAACTAAACCACCACCATCTTCAAGGTATTAGTCATTTTTACATTCACCTATTCATTGTAAAATCCTCTAGTAGATAACAAAGTTCATCTTCCTAATGACTTATAGGGTTTCTACAGTGATTAACAAGATCTGGATTAAACAAATCAGTGGTGGGGTGAAAAATCAAATAAAATTGCTTATTTTGCTTTCTGAAAGACTGAGTGTCTGTTATACAAGAAAATATCATATGACAGTGATAATGACCTTTAATTAAGACTTTTTCAGAGATGTCGTTTGTAAGAGGTCTAATGCTCAGAATGCCACCACCAAACTTAAAGCTCATAGAGAATGTAAAAATAAAGCAAATAGGTCTAAGAATATTCCTGCATAAATTGTTTTTATTTAATGAAGAATGTAAACCTTCAGTGTATCTCTCAGACACCCTGGCGCTGCTCACAGAAGGTGCTGCCACTTACCTTTGATGTGCTGTCCCTCTGGTTCTGAATGTCTGTTGTTAAAACTGGGAACTAAGATGGAAAAATGTATCTGGGTGGAAATGTCACTCCGTTGATTTGTGAGCTATAAATGTTCACCTTTTTAAAATAATTTAAATGCATAAACAAATGATTAATATTTAATTTGATATAGCAGCAAAAAAAAAAAAACATGTGAGCCATCCTGTACTTTGGTTGTTGCTTTAATAAAGGATTTGCACAGGTGTGCCGAGCGTGCCA EMBV3_04114 ACCCAGGTCCCCTGCATTGCAGATGGATTCTTTATCATCTAAGCTATCAGGGTAGCCCCT Gene BVV0102_283462 + 0 NULL GK000011.2:18249081-18642646 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35307 TCGGCTTTCAGTGCTGCTTTATCCAAGCCCTTCCCTCCTCCCAATGCCCCTATCAAGTTT Gene GeneID:525044|LOC525044:XM_002684951:208_cdna Constitutive 0 NULL GeneID:525044 1 GENE LOC525044 NULL similar to otolin-1 EMBV3_32514 GTTTCGAGTGGGACAAGGATTGATAGAAAGGGCATCTATGTACTTCAGGACAACAAATTT Variant GeneID:521470|TRAPPC6B:NM_001038134:23_cdna 295^412 4 EMBV3_21666 GeneID:521470 21 GENE TRAPPC6B MGC133693 trafficking protein particle complex 6B EMBV3_12600 AGAAGGAGGAAGGTAACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGA Gene BVT0102_169445 + 1 EMBV3_25002 GK000009.2:30225168-31437605 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00010779 TCONS_00253025 TCONS_00238445 TCONS_00115687 TCONS_00152859 TCONS_00252012 TCONS_00231502 TCONS_00249921 TCONS_00186108 TCONS_00165813 TCONS_00248863 TCONS_00109859 TCONS_00209829 TCONS_00007360 TCONS_00023615 TCONS_00252354 TCONS_00057311 TCONS_00008225 TCONS_00009883 TCONS_00040835 TCONS_00218891 TCONS_00010052 TCONS_00006222 TCONS_00064811 TCONS_00218899 TCONS_00251930 TCONS_00161793 TCONS_00175545 TCONS_00055867 TCONS_00137302 TCONS_00117484 TCONS_00021596 TCONS_00065249 TCONS_00038933 TCONS_00039853 TCONS_00232349 TCONS_00238357 TCONS_00249989 TCONS_00152628 TCONS_00020651 TCONS_00072815 TCONS_00177280 TCONS_00189806 TCONS_00206861 TCONS_00064927 TCONS_00185582 TCONS_00148279 TCONS_00007555 TCONS_00156997 TCONS_00063180 TCONS_00080765 TCONS_00245928 TCONS_00020399 TCONS_00153219 TCONS_00185807 TCONS_00108589 TCONS_00223462 TCONS_00124845 TCONS_00218943 TCONS_00176254 TCONS_00056728 TCONS_00006827 TCONS_00231487 TCONS_00022065 TCONS_00198816 TCONS_00007442 TCONS_00250881 TCONS_00064461 TCONS_00020016 TCONS_00201733 TCONS_00038667 TCONS_00200536 TCONS_00209835 TCONS_00166733 TCONS_00031911 TCONS_00209098 TCONS_00071185 TCONS_00156732 TCONS_00066285 TCONS_00179470 TCONS_00055388 TCONS_00179054 TCONS_00019263 TCONS_00185876 TCONS_00251706 TCONS_00056147 TCONS_00242007 TCONS_00239418 TCONS_00116101 TCONS_00070840 TCONS_00154085 TCONS_00063487 TCONS_00250938 TCONS_00156870 TCONS_00223365 TCONS_00176255 TCONS_00240475 TCONS_00020010 TCONS_00209529 TCONS_00040698 101 XLOC_006139 XLOC_131641 XLOC_006330 XLOC_155966 XLOC_145112 XLOC_069856 XLOC_092624 XLOC_154953 XLOC_140991 XLOC_152864 XLOC_112161 XLOC_100653 XLOC_151806 XLOC_065763 XLOC_128340 XLOC_002921 XLOC_014282 XLOC_155295 XLOC_035110 XLOC_003783 XLOC_005436 XLOC_024649 XLOC_132210 XLOC_005604 XLOC_001785 XLOC_039535 XLOC_132218 XLOC_154871 XLOC_098678 XLOC_105326 XLOC_033675 XLOC_083512 XLOC_071650 XLOC_012269 XLOC_039971 XLOC_022753 XLOC_023670 XLOC_141834 XLOC_145024 XLOC_152932 XLOC_092393 XLOC_011326 XLOC_044583 XLOC_107054 XLOC_115843 XLOC_125381 XLOC_039651 XLOC_111635 XLOC_090161 XLOC_003116 XLOC_095457 XLOC_037907 XLOC_049649 XLOC_150855 XLOC_011076 XLOC_092984 XLOC_111860 XLOC_064494 XLOC_136762 XLOC_076388 XLOC_132262 XLOC_106033 XLOC_034531 XLOC_002389 XLOC_140976 XLOC_012736 XLOC_120469 XLOC_003003 XLOC_153824 XLOC_039185 XLOC_010694 XLOC_123378 XLOC_022490 XLOC_122188 XLOC_128346 XLOC_101569 XLOC_018156 XLOC_127609 XLOC_042957 XLOC_095192 XLOC_040999 XLOC_109243 XLOC_033196 XLOC_108827 XLOC_009943 XLOC_111929 XLOC_154647 XLOC_033950 XLOC_148671 XLOC_146084 XLOC_070270 XLOC_042617 XLOC_093846 XLOC_038214 XLOC_153881 XLOC_095330 XLOC_136665 XLOC_147139 XLOC_010688 XLOC_128040 XLOC_024514 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_30621 GCAGTGTGTGGCGTCACACCCAGAAACCAGGGGCTCTGGTGAAAACAGATGAGCAGGAAG Variant GeneID:536537|RQCD1:NM_001101167:107_cdna 437^546 4 EMBV3_05280 GeneID:536537 2 GENE RQCD1 NULL RCD1 required for cell differentiation1 homolog (S. pombe) EMBV3_16056 CTGGTCCAGAAGCACTTGACAAAACTAAGACATTGGCAGCAGGTGCTGGAGGACATCAAC Gene GeneID:513972|MED28:NM_001038538:168_cdna Constitutive 1 NULL GeneID:513972 6 GENE MED28 MGC133509 mediator complex subunit 28 EMBV3_32672 GAGGACTGACTTTCACCTCAAACTCCTGGGCACAGCTTCCTGAATCTAGCATTTCTACAG Gene GeneID:616789|TMEM218:NM_001099159:35_cdna Constitutive 1 NULL GeneID:616789 29 GENE TMEM218 MGC152448 transmembrane protein 218 EMBV3_09591 AAAGAAGAGGCTCCGTGTTGACAAATGGTGGGGAAACAGAAAGGAACTGGCCACTGTTCG Gene GeneID:782740|LOC782740:XM_002691961:3_cdna Constitutive 0 NULL GeneID:782740 12 GENE LOC782740 NULL similar to 60S ribosomal protein L9 EMBV3_01593 CCCAGACAGGCAGGTGTCCTCAGGATCACAACATCCTTGAGCAGTTTAACGTGGTACCAA Gene BVV0102_165787 + 0 NULL GK000025.2:38676682-38680225 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147315 TCONS_00147317 TCONS_00147318 TCONS_00147316 TCONS_00147319 TCONS_00147314 1 XLOC_089342 Coding TCONS_00147316 XLOC_089342 Coding Coding CYTH3 25:38677522-38728880 j TSS109946 4444 1 TCONS_00147316_2 486 16 0.913780010514633 0.00189113195806801 0.00122867570781221 0.00292550706853364 0.0016622333286606 0.000797379558389234 0.00132610460814261 0.000331279653152373 0.00178758633121932 0.00146303394013838 0.00119444495305548 0.000834246705130587 0.000512046791585181 7.7774920187521e-05 3.75827978467345e-09 0.00017434053470891 0.00264207749983589 0.00233863702892617 0.00388099330801082 0.000736579602790668 0.00146268713594339 0.000272217012278365 0.00160192473002602 0.00222399085562034 0.00153345201367507 0.00135947642756241 0.000466169941269364 0.000148388495629309 0.00039248721428646 0.00017782479055805 0.00103795422884446 XM_002698150.2 LOC618488 PREDICTED: Bos taurus uncharacterized LOC618488 (LOC618488), mRNA. 0.0 6278 100.00 0.783078307830783 NM_004227.3 CYTH3 Homo sapiens cytohesin 3 (CYTH3), mRNA. 0.0 949 91.02 0.152565256525653 TCONS_00147316_2 sp|O08967|CYH3_MOUSE CYH3_MOUSE Cytohesin-3; 1e-130 389 96.84 0.388888888888889 2 coding 0 0 1 0 -0.0602384493147318 0.573631248434725 -0.0394306316416597 0.413897386398977 AGAAGTCCTGGGGTTCCGTGGTGATCGTCTAAGCTGTGGGTTCTGGACTTGACTTGCTGGTGCCTGAAGACCTTTCACTAGAAGAAAGAGAAGAACTTTTAGACATCCGTCGAAGAAAAAAGGAACTTATTGATGACATTGAGAGGCTGAAGTATGAAATTGCGGAAGTGATGACGGAGATCGACAACCTCACGTCGGTGGAGGAGAGCAAAACGACTCAGAGGAACAAGCAGGTCGCCATGGGGAGGAAGAAGTTCAACATGGATCCCAGAAAGGGAATCCAGTTTCTAATAGAGAACGACCTGCTGCAGAGCTCCCCGGAGGATGTGGCCCAGTTCCTGTATAAAGGGGAAGGCCTGAATAAGACAGTCATCGGGGACTACCTGGGTGAAAGGGATGAATTTAACATTAAAGTTCTTCAGGCTTTTGTGGAACTCCACGAGTTTGCTGATCTCAACCTCGTACAAGCCTTAAGGCAGTTCCTCTGGAGCTTCAGGCTGCCGGGCGAGGCGCAGAAGATCGACCGCATGATGGAGGCCTTCGCTGCTCGCTACTGCCTGTGCAACCCCGGTGTCTTCCAGTCCACGGACACGTGCTACGTGCTGTCCTTCGCCATCATCATGCTCAACACCAGCCTCCACAACCACAACGTGCGCGACAAGCCCACGGCCGAGCGCTTCGTCACCATGAATCGCGGCATCAACGAGGGCGGGGACCTCCCCGAGGAGCTGCTGCGGACGTGCCGGGCTCACTTCATCCTCCACGCAGGGCAAGGTGCCGCGGCCGCGTCGCCCCTCCGCGGCTGGGCGAGGAGTGAGGGACCGAGGCGCGTGGAGATGCCGGGCGGAGACAAGCTCGCCCCTCCGCGTCCTTGGGCCCGAGCGCATCGCCCGCCGCCCAGCCCGCTAACCAGGCAGTGCGTGTTTGCACCACCTGTGCAGAGTCCAGGGTTCGGAAGACTTCTGGATCTTGGCCTAAAAAGCCAGAACCGTAGCAATGGCCATAACCGGACCACAGCGTTGCGGCAGAGCACCAACAGGCACAGGGCCGGCTGGTACCCAGGGGTGTCCCAGGGTCCCGGGGCCTGCTACTCCCCCGTTCCCGCAGCCCCCGCTGTGTCCTCAGACCTAAGACTGAGGGCCACAGAGCTGGTGATGGCACAGGTCGCACCTGTAGCCCGGAGCCTCAGCCCCTGGGGCTGTTCTGCTCTCAGAGCTGTTAGCGTCCCCGGGGTGTCCAGCACACGGCCGGCCAGGGGGCGCGTGAAGACCTGGAAGCGGCGCTGGTTCATCCTCACCGACAACTGCCTCTATTACTTTGAATACACGACGGATAAGGAGCCCCGGGGGATCATCCCGCTGGAGAACCTGAGCATCAGGGAGGTGGAGGACCCACGGAAACCCAACTGTTTCGAGCTGTACAACCCCAGCCACAAAGGGCAGGTCATAAAAGCCTGTAAGACAGAGGCGGACGGCCGGGTAGTGGAGGGCAACCACGTGGTATACCGCATCTCGGCGCCCAGCCCGGAGGAGAAGGAGGAGTGGATGAAGTCCATCAGAGCGAGTATCAGCAGGGATCCTTTCTATGACATGTTGGCCACGAGGAAAAGGAGGATTGCCAATAAGAAATAGAGCTTTCCTGGTCTGAGCAGCAGGTAAAAGTAAACTGAAACCCCACAGCAGAGTGACTGGGGGCTCCCCGCGACACCCTGGACCACCCCGACGGCCTGCCCTGTCTCTGCCGGGACAGCAGCCCCTGCTGATCTCAAGAGGCCTCACGTCACCCCTTCCCCCCGCCGCCCTCCCGGCTCCGAGGACATCCTTCTCGAAGTCCCGGCCTGCAGCTGTGCCTGGTGGTCCAGCCTTGAATATCCGCGGGCAGACAAGGGGCCCCACGTGCTCCTTGGTGGCAGTGGCGGTGTTGGCCGTTCTGGAAGCCGCTGTTTTGTGTCATAACAGGAAAGGAAAAGCTACCACTTTTTTATTGAGTTTTTTTCTCAGATATATAGGATTATAGCTTTTATACGCCTTTTTATATTCTGAAATTATAATGAAAGATACTTTCTAACAGTAGTATTTTTAGAATGGCAGCTATAAATTTAACTTCTGGACACACGTATATACTGTGCACTGAGAACAAGTTACATATACACACATATGCAGCAACTGGGGAGTTGGGTGCCGTGCTCAAGGGGAACCCGAGGGCGCCCCCTTGTGGAGGGAGACGCCCGTGTCCTTGAGGACACGCACTGGGCAGGGTAGGGTTCCAGGGGTCCAGTCTTGTGAGTCATCCAGCTCAGTCTTCGTGGCCCCACAGATAACTTTTCTAAAGACACAAATCATAAATTTTGTTTTGGGGTGTTTATCCTGTAACTGCTGAATCCCAGGACGGACAGTGTATGTATTGAACCACATGAAACTGCTCACATTTGACCCGTTTCTGATACCCACAAACAGCAGTGTCACATGGTCCAACCAGACACATGGTTCAGGCCAGCTGCGACCCCTGTCTTCACTAGTTAAGGCCTGTTGGCCAGACGAATACTTATAATGATCAGATATGTTAATGTAATGTGTAGACATATAAGGAACAAGAGATAATCTTCCGCTGTGTTTTGAGAGATTTGATCTATTACAGGAAGGGGAAGAGCAGGCTGGGGGATGAAGGTGTATAGCACTTAGGCTTTTTTGTAAATAGTTTAAAACCCCAAATATGCACTGGTGGTCAGACTGGAGAAGATCCCTGACCAGGAGGTTGTCAGGTGCCGCTGGCTGAAGGAGAGGTGCTCAAGCGTGCAGTGAGGAGCTGGGCCCATCATGCCACAGAGATGGCCCAAGGGTGCACAGGTGGGGCATTCAGGGCCGGGCCAGTGACATGCCTTTTAAGTTTCATTTCCACCACCAGGACCCCCGCACATTATATGTAGGACCCCCTCGCCCACATGGGCTGTTTCGGTGGAGGGTCCCTTCCCTGGGGGACCTCTTTCCCTGCCCTACTGCGAAGACACCCACCTTGTTCAGTCTGTACGCCTGAGAGGTCATCACCTCTCCTGTGCAAAGGCCAAGTTCAAGAAAGACCACCTCAGCCTATGCATGGAGAGGTGAAACAGAGAAAACGTTTCCTGGGAGTTGCCTCGATGCTGAGACGGAATGGCTGTTGGCTCCCAGCCTCGTGCAGCTTAAAGTCACACTAGACTGCAAAGGGGGCCACGCCCAGGACCCTCCACCAGGCATCAAACTGACTGTTTTGGTTCATTCCCAAGCATTTAGGCTTTGCTACTGTACCGATACCTCAGATTCAAACCTCTAGTTCTGAGAAAGGCAAGTCAGCATTCCTGAAAACGCCTGACTGGCATATATGCAACTCTGGCCCCAGTCTTCCATGAAAAGACGCTGCCCAGACCACCCGACCAAACACTGCTGACAACAACCGGCAGCGCCCTCCCCTCGGGCCAGCCACGCTCCTGGGCTGCCTGGGGTGCCAGCTCCATCAGTATTACGCGTGGGACAACCGATCTCTCTCTCCTTTGTTTGATCCAGGAGCCTCACCGGACGGCTGTTTGCCTGGGATGATGCAGAAGGCCGTGGTGCTCAGGATCTGTCCCTTGCCCTAGAAGTGTTACGTGAAGTCATGGAATTCCAGGTTTTGTCGTGACAGTATTAACCTGACAGGCTTACGGTGTCCTCCCCCACTAAGCCCTCAGATGGCCTGGTCCAGAAGCCCCGCTGGGTCAGGGCTGTGCGGGGACAGGTTGTGGCTGGCGGGCCTGGTTACCTGGATCTCAGTGTGATCCTGTTCGCCCCCCTGCCACCCTCCCGTCTGCACTCAGTGCTTGAATTACTCGCCTTGTCCCAACTCTGGCCAAAGAGCTTCCCTCCAGCGATAGAGGGCTGGAGGCAGGGAAGGTCTGCTGGGTGGGAGGCATGGCTTCCACAGCCCCACTCGCCCCCATTGACATGGGGGTTTAAGTGGACAACCCTGGGCCCAGACAGGCAGGTGTCCTCAGGATCACAACATCCTTGAGCAGTTTAACGTGGTACCAAACGAAGTCCAAATAGGAGCTATTTATAGATGAAGCAGCATTTAATGCTGCATATAAAGCAATGCATATTTTTCAAGCTAAAAGGCATATATCTACATAGATGTGCTTTGCTGAGAAGTTAGGTCTGTTGTAGACCAGAAACCACACATTGTGATTTCTCGTTTTATTTTTTCTTAGAAAACATTTCTATTTACGGTAAATAGTTAATATGTAAATAATGTACATATATGTTGACTTCTGGAGTGTTTGTTACAATGTATATACTCCTACAATGTGCATGAAGAAATATCCTTTATCTATTGATAATTTTGTTGTAAAGTGAATGGTAAGCCTGGAGAGTGTATGGCTGTCAAATGACAAATACTGTGTTCATTAAATAAAAACACATTGTTAAAATAAGAT EMBV3_02440 GCCCAGCTCTGCTTTCCCCAGAATTTCCAACTGATTTTACACCCATCCTGCTGAATCCTC Gene GeneID:538710|G6PC:NM_001076124:183_cdna Constitutive 0 NULL GeneID:538710 19 GENE G6PC MGC137220 glucose-6-phosphatase, catalytic subunit EMBV3_11104 GGGATCCACCCCAGATGAGTAGGGATTGGGAGGTAAAGAGGCTCAAGGCTGATCACAAAA Gene BVV0102_030679 + 0 NULL GK000017.2:45577519-45613676 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077124 TCONS_00077116 TCONS_00077121 TCONS_00077118 TCONS_00077122 TCONS_00077119 TCONS_00077120 TCONS_00077117 TCONS_00077123 1 XLOC_046991 Coding TCONS_00077116 XLOC_046991 Coding Coding FBRSL1 17:45612305-45624409 j TSS57732 3165 1 TCONS_00077116_4 592 15 0.739733950260266 0.00021127234997911 0.00022400150819854 1.89710840905026e-15 1.10420512514089e-05 0.000272271738634665 2.64663628933613e-10 0.00015060040438101 1.26525349880141e-06 2.15639958540487e-05 4.83315336979171e-06 1.72688033517951e-05 4.89603835727114e-05 2.48737665845486e-05 1.32407478501402e-05 5.54771648779853e-05 0.000257068865312841 1.57208470481596e-05 8.52514599959825e-98 5.01534254117045e-06 7.3600672309437e-05 1.75569716071675e-39 0.000100817936136262 7.38421179781136e-51 1.63678884140607e-17 0.000460147188744983 0.000297380597014731 1.6931333173124e-73 1.78585576492849e-06 7.65679637384012e-05 8.35826015983872e-05 XM_003587137.2 FBRSL1 PREDICTED: Bos taurus fibrosin-like 1 (FBRSL1), mRNA. 0.0 5003 97.86 0.927014218009479 XM_003403652.4 FBRSL1 PREDICTED: Homo sapiens fibrosin-like 1 (FBRSL1), partial mRNA. 0.0 1436 82.72 0.430647709320695 TCONS_00077116_4 sp|Q9HCM7|FBSL_HUMAN FBSL_HUMAN Fibrosin-1-like protein; 1e-172 522 68.67 0.793918918918919 1 coding 0 0 0 0 -0.0516687067362811 0.758268523893766 0.00415873885808132 0.928506139363011 CTCAGTGCAGCAGGAGCAGCAGCGCCAGCAGCGGTGCCAGCCTGGGGCTCGCGAAGCACGCGTCCCTGTCGCCTCACGGGCCGGGCCCCCACCTCTCTACCTCACACTTGGCGCTCCGCTCGCAGGCCCAGCACCAGCACCACGCGGCGGCCATGTTCGCCGCACCCCCGACACTGCCCCCGCCCCCGGCGCTGCCGGCCAACAGCCTGGTCATCCCAGGACACCCCGCCGATCACGAGCTGCTCAGGCAAGAGCTGAACGCGCGTTTTCTGGTCCAGAGCGCCCCCCTGGGCCCGGGAGCTCTGCTGCGGGCGGAGTTCCACCAGCACCAACACACACACCAGCACACACACCAGCACCAACACACATTCGCCCCCTTCCCTGCCGGGCCGCCCCCGCCGCCGCTCCTGCCACACGCCGCACCCCCGCCGTTTGACAAGTACACGCCCAAGCTGGACAGCCCCTACTTCCGACATTCCCACGTGAGTTTTTTCCCGCCCTTCCCTCCTGCCGTCCCAGGACTGCCCGCCCTGCTCCCACACCCAGGCCCCTTTGGATCCCTGCAGGGTGCTTTTCAGCCCAAGCGAGCTGCCTTCACACAGCACAGCGATCAGAGCCTTCTCCTGCCGCCTTTTCAGAAACCTCCGGATGGAGGATGTGGTGGGGCCAGACCATCCTGGCAGGTGTCCGACCCGTACCGGACAGCAATCAGGAAGCCGGGGAAGTGGTGCGCTGTGCACGTGCAGATCGCCTGGCAGATCTACCACCATCAGCAGAAGATAAAGATGCAGCTGGAGCCCCACAAGCTGGACGTGGGCACCAAGCTGGACTTGTTCAGCAGACCCCCCGCCCCGGGTGTGTTCGCCGGATTCCACTACCCACAGGACCTGGCCCGGCCCCTCTTCTCCAGCTCGGGTGCCACCCATCCCGCCGCCAACCCATTCGGACCCTCAGCGCATCCTGGCAGCTTCCTGCCCACTGGTCACTTGACAGACCCTTTCAGCAGATCAAGCACCTTCGGGGGCCTGGGGAGCCTGGGCAGCAACGCCTTCGGAGGCCTTGGCAGCCACGCGCTGACTCCCGGCGGCGGCAGCATCTTTGCCCCCAAGGAGGGCCCCACACTGCATGGCCTGCCCAGCCCCCACGAGGCCTGGAACCGGCTGCACCGAGCGCCACCCTCCTTCCCCACGCCACCCCCGTGGCCCAAGCCTTTAGATGCCGAGCGGGTCTCAGCCCTGACCAACCACAACCGAGAGCTGGACAAGGGCAAGGAGGAGCGGGACCGGGACCTCCTGGAAAAGACACGCCTGCTGAGCCGGGCCTCTCCAGCGGCGCCCGTGGGCCACCCAGGCAGTGGCCTCGTGCTCCGGGGCCAGGGCGATCCGGGCCGGCCCGGGATCCCCGCCGAACGCGAGGCTGAGCTCCGCATCAAGGAGAGCCGCTCCCCGGCCAGGGAGGATGGCCCCAAGCCCAGCAAGATGGCCCTGGGGGAGGGCCTGCGCCTGGCCGGTCTCCTGGGCCGCGAGCCTGGGAAGCCGCAAGAGGCGCTGGCCGAGCAGCCCCAGAGCGACGTGAAGGTCAAGGAGGAGCGCGCGCACGACTACAGCCCCGAGCGCCTGCGGGAGGCGCGCCGCGACGAGCTAGAGCGCGCCCGGGCCGCGCACCTGGACGGCGCGACGCTGCTGCCGGCGCTGGGCGCCCTGCACTACCCGCGCCTCGCGCCCGCCGCGCTGCACAACAGTCTCCTGGCGCGGACCCCGCCCACTGCCGCTGCCGCGCTCGGCGCGCCGCCGCCGCTGGTGGCGGCAGGCGGGCCCCCCACGCCCCCGGGGCAGCCGCGGAGCAGGACTACGCCGCTGGGGGCCCGCGCGCCGGGCGAGGCCCGCGACTACTCCCCGTCCCGCAACCCCCAGGAGGTGGAGGCGCGGTAGTGGCCGCGGGCCCACTCCCACCGCGCGTGCGGGTCCCCTCCAGGAACGCACTGCTGTCCACTTTTCTAAACGTCCGTTTCTAGAACCTAAGCACAGTTCCATCGGCCCTGGGGTGGCGACGCTCACTTTTCCACTCGCAGCGTCGGGGGTGTCACACACAGCTTTTCTGGGGGTGATCTTTTGTTTTCCGAGCTTGAGATTAGGCTACTGGAAAAAAAAAAAATTCAAGTTTGTACCTTTTTTCCCACAGGTGAGAAGCATTTTTAATAGATTTGTATTTTTTTCAACTTTGTGCTCTTTAGACACTTAAGAGAAACGAAAGACACTTTTGCTTTTTTACTTTTAGTTTGGTTTTGCAATTTAATGGCCTCAGATCTGTCTCCAGAGCCCCTGGGGTTTTTTTTGTCTTATTTATGGTGGAAAAAAACGGTCATTTTGTCCAATGCACTGTGAGGCCCCCACTCAGGCCTGGCCCTGACCCTCCCTTGGTACTTGGAACCGAAGTTACAGATATATATTAAGATAATAATGTACAAAGCTTTTTTTGCCTTATTATGCAGAAGTGTAAAAGGGTTTCTTTTTCGGTTTGTTTTTTTTTAAAAGAAAAATGAAACTGTAAATAGTCTGTTAATATAAATATATGATGTTATTAAATTCTTAACCTAGGTAGACTTTATAAAAACAGTTTCTAGAAATTTCTCTGGTTGGTTGTTTAAGGTGGTCACAACAACCCACCCGCTGTCAGTTGGAACTGCCCTCAGACGTTTAATGGCAGCAACATCCTTCAACTATGCAAGCGCTTGAGCGGCCAGGCCGCTGGGGGACTGCGGAGTGGCCCTGGGATGTGCGTGCACCTCGGGCTGGTTGTGCGGTGGCCTGGGGATCCACCCCAGATGAGTAGGGATTGGGAGGTAAAGAGGCTCAAGGCTGATCACAAAAGAAATAACCTGTGTTTCTTCTCCACGGAGGCCATCAGAAGACATCGGTCTCATGTTCTCCCACCGGCCAGGGCTTTGGCATGATTTCCTTTCGGTTTCAGTCTTACTTTCATAACCCCATGATGTCACTGTACCCTCTTGTCAGTATCCCTTCTTTCCTGACGTCCACACCTGTGTCCTGAGCGTTGGAGCCTCGGTTTGGCCATCCTTGGCTGTTTGCTTTATTCCGTTCTGTATTTTCAACCCCATGTTTTCACGGTAGACCCCGCTTATTTTAAACAGTCTGTTCTCACATC EMBV3_37644 GCTGTAAACTTCCCTCTTAGGACTGCTTTTGCTGCATCTCACAGGTTTTGAGTTGTCGTG Gene BVT0101_065520 + 0 NULL GK000018.2:62165478-62219312 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091705 TCONS_00197296 2 XLOC_056478 XLOC_118958 NonCoding TCONS_00091705 XLOC_056478 NonCoding NonCoding - 18:62215446-62215927 - TSS69051 481 1 TCONS_00091705_1 62 0.997920997920998 1 0 4.24293007335498e-05 0 0 0 3.07931755805459e-05 1.06238420069521e-06 0.000121240932752056 7.3780220444168e-05 0.000508512071690653 0 0 0 0 0 1.01999910284053e-06 0 0 0 5.9633527556615e-05 0 0 0 0 0 0.000205261532206528 4.39427145734499e-05 7.41022770660641e-05 0 0 4.99978641805847e-05 XM_005216780.1 KCTD3 PREDICTED: Bos taurus potassium channel tetramerization domain containing 3 (KCTD3), transcript variant X1, mRNA. 5e-64 248 78.02 0.656964656964657 XM_005262092.1 TIMM8A PREDICTED: Homo sapiens translocase of inner mitochondrial membrane 8 homolog A (yeast) (TIMM8A), transcript variant X1, mRNA. 8e-62 241 72.41 0.952182952182952 0 noncoding 0 0 0 0 0.0156353568923446 0.926547228531976 0.0211636171083707 0.66503216559291 GGTAGGATTGTATTGCTGTAAACTTCCCTCTTAGGACTGCTTTTGCTGCATCTCACAGGTTTTGAGTTGTCGTGTTTTCATTGTCATTTGTTTCTAGAAATTTTTTAATTTCCTTTTTGATTTCTTCAGTAACCTGTTGGTTATTTAGAAATGTATTGCTTAATCTCCACGTGTTTGTGTTTTTTAGATTTTTCTTGTAATTGATATCTAGTCTCATAGCATTGTGATTGGAAAAAATACTTGATATGATTTCAATTTTCTTAAATTTACTGAGGTTTGACTTGTGACCCAAGATGTGGTCTATCCTGGAGAATGTTCCATGTGCACTTGAGAAGAAGCTGTATTCTTCTGCATTTGGATGGAATGTCCTGAAGATATCAATGAGATCCATCTCATCTAATATATCATTTAAGACTTGTGTTTCCTTATTAATTTTCTGCTTTGATGATCTGTCCATTGGTGTGAATGGAGTGTTAAAGTC TCONS_00087482 TCONS_00087483 TCONS_00087484 . 3' 1828 TCONS_00087482 TCONS_00087483 TCONS_00087484 . 3' 2308 EMBV3_20725 TGCTCAGTGACACGATGTGGTCTGCGCTTGCTGGGGCTCTGTTAGGAAGATCGTTCTAGA Gene BVT0102_252118 + 0 NULL GK000024.2:1265109-1297970 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139647 TCONS_00139648 1 XLOC_084951 Coding TCONS_00139647 XLOC_084951 Coding Coding LOC100138793 24:1293659-1304489 j TSS104404 7908 1 TCONS_00139647_5 762 5 0.270200387847447 0.000499090661137095 1.24323863007163e-06 0.000693455675113019 0.000311499747205911 0.000266116492012908 8.35204625633638e-05 0.00024337343458005 0.000248210607916071 0.000237649804649389 2.87247562796576e-05 1.89593369101001e-06 4.06519051459332e-05 2.69632500458374e-05 0.000132538219270246 5.1476714774941e-05 1.18260913795564e-10 6.27105550539566e-06 1.34426884418561e-05 0.000654085454964159 0.00124119789365951 3.55094681326506e-05 0.000120828006406492 2.34644221670273e-05 2.42857481072975e-08 0.000324309275206525 0.000660869021361827 0.000351497981195348 5.90949035624521e-05 1.78758421167707e-09 9.88254994228505e-05 XM_003583947.2 SALL3 PREDICTED: Bos taurus sal-like 3 (Drosophila) (SALL3), partial 0.0 9514 99.77 0.67058674759737 XM_005266680.1 SALL3 PREDICTED: Homo sapiens sal-like 3 (Drosophila) (SALL3), transcript 0.0 2931 83.26 0.35432473444613 TCONS_00139647_5 sp|Q9BXA9|SALL3_HUMAN SALL3_HUMAN Sal-like protein 3; 0.0 747 80.43 0.662729658792651 5 coding 0 0 0 0 0.0947952062618129 0.523560727043492 0.0339985448725128 0.54574361935911 ATGGACCTGAGGGTGCGTGGCGCTCACACTCCACTGCGCACGACAACAAAGGGCCGGCTTGAGGCTGTCACTTGTCTCTGTCCAGCGGCCCCCGGGGAGGGCACCGAGGACGCGGACAGCGGCAACGAGAGCCGGAGCGGAGGCGAGGACACGCACGTGTGCGAGAAGTGCTGCGCCGAGTTCTTCAAGTGGGCCGACCTGCTGGCGCACAAGGAGGCCTGCACCAAGAACCCCCTGGTGCTGATCGTGGGCGAGGATGAGCCCGCCCCGCCCTCCGAGGACTTCCCCGAGGCGTCCCCAGCCAGCTCGGCCAGTGAGCGCGCGGACAGCGAGGCTGCCGAAGAGGCGGCGGCAGCGGCGGCGGCGGCCCCGGAGGGCGGGGAGGCCGTGGAGGCGAGGGCACCGGAGCGGGAGGACGAGCCCATGGAGGTGGGCGCGCCCGCGGACAAGGGCTTCCAGGGCCCGGGCGCGGCGCATGCGGGGCAGCCGCCTCCACCGCCAGGCCCCGAGCCGGCCCCCGGGGCGGCCTACGGCATGCCCAGCACCAACGTGACCCTGGAGACCCTCCTGAGCACCAAGGTGGCCGTGGCGCAGTTCTCGCAGACCTCGCGGGCCGCGGGTGCAGCGGGCCCGGGCGGTGGCGTGGCGGCCGCGGCCCTCCCGCTGATCCTGGAGCAGCTCGTGGCCCTGCAGCAGCAGCAGGTGCAGCAGCTGCAGCTCATCGAGCAGATCCGCAGCCAGGTGGCCCTCATGAGCCGCCCGCTGCCGCCTTTACGGCCGCCGCTGCACCCCGGGCCGCCCGGTGCCCCCGCGTGCTCCGGTGCCCCCGCGACCTCCACGGCCTCAACCCCAGCGGCCGGCGCCTCGGGGGGCGCCTCCCGGCCACAGAACGCCCCCACGCCCCCCGCCCTGGGGCCCGGGCCGCTGCTCACCTCTACACCCAGCCTGCCAAGCCCACTGCTACCTCAGACCTCCGCCAGCACCGTCATCTTCCCCAACCCGCTGGTCAGCATCGCGGCCACGACCAACGCGCTGGACCCCCTGTCAGCCCTCATGAAGCGAGGCAAGGGCAAGCCCCCCAACGTGTCGGTGTTTGAGCCCAAGGCCAGCNCTGATGACCCCTTCTTCAATCAAAAGGGCAGGTTCTGCGCCAAAGTGTTCGGGAGCGACAGTTAAAAGGAGATCCACCTGCGCTCGCACACGGGCGAGCGGCCCTTCAAGTGCAACATCTGCGGGAACCGCTTCTCCACCAAGGGCAACCTGAAGGTGCACTTCCAGAGGCACAAGGAGAAGTACCCCCACATCCAGATGAACCCCTACCCGGTGCCCGAGTACCTGGACAACGTGCCCACCTGCTCTGGGATTCCCTACGGGATGTCGCTGCCGCCAGAGAAACCGGTCACCACCTGGCTGGACAGCAAGCCAGCGCTGCCCACTGTGCCCACCTCAGTGGGGCTGCAGCTCCCACCCACCCTCCCAGGCGTGGGCGTCGGCAGCTACGTGGACTCCCCCAGCCTCACCCCCGCCAGCCGCTCCCCGCAGCGGCCCTCACCCGCGTCCAGCGAGTGCCCTTCTTTGTCCCCAGGCCTGACCAGCTCCGAGGCAGGCGTCCCGGTGGCTGCAGGATCCCCGCAGCCAGCACCCGGTGGATCTTCCCTGCCCAAGACCGAGCCCGTGAGCCTGCCCTGCACAAACGCCAGGGTAGGGGACCTCCCGGCCACGGCGGGGCAGGTCTCCACCACGTCTGCCCTGGCGGACAGCAGTGCATCCCCAGGCCTCTGCAGCCCGGTCCTCCCGGCCGGGGCCGAGCCGTTTAAGGCCAAGTTCCCCTTCGGAGGGCTGCTCGACTCTATGCAAACGTCCGAAACCTCCAAGCTGCAGCAGCTGGTGGAGAACATAGACAAGAAGATGACAGACCCCAACCAGTGCGTCATCTGCCACCGCGTGCTGAGCTGCCAGAGCGCCCTGAAGATGCACTACCGGACGCACACGGGCGAGCGGCCCTTCAAGTGCAAGATCTGCGGGCGTGCCTTCACCACCAAGGGCAACCTGAAGACGCACTTCGGCGTGCACCGCGCCAAGCCACCCCTGCGTGTGCAGCACTCCTGCCCCATTTGCCAAAAGAAGTTCACCAACGCCGTGGTGCTTCAGCAGCACATCCGCATGCACATGGGGGGCCAGATCCCCAACACGCCGCTGCCCGAGGGCTTCCAGGACGCCATGGACGCTGTGCTGCCCTACGACGACAAGGCCGCCGATGCTCTGAGCGCCTGCGACGACGACATGGACGACAACTCCCTGGAGGATGACGCAGAGCTGAAGGACGCGGCCGGCGACCCAAACAAGCCACTGCTGGCCTTCTCGGGCTCCTGCCCACCCTCCCCGCCCTCTGTCATCTCCAGCATCGCCGCCCTGGAGAACCAGATGAAGATGATGGACTCAGTCATGAGCTGTCCGCAGCTGAGTGCCCTCAAGTCTCTGGAGAACGGGTCTGGGGAGAGCGACCGTCTGAGCAACGACTCGTCCTCGGCGGTGGGCGACCTGGAGAGCCGGAGTGCGGGCAGCCCGGCCCTGTCTGAGTCGTCCTCCTCCTTGCAGGCCCTGTCACCCGGAAACAGTAACAGCGAGAGCCTGCCCTCCAAGTCCCCGGGCCTTGGCGCCCAGGAGGAGCCCCAGGAAACCCCGCTGAAGACGGAGAAGCCGGACAGCCCGCTCCCCGGCCCCGAGAACGGAGGGGCGCTGGACCTGACGGCCACCCACCCGTGCCGGCCGTCCGTCAAGGAGGAGGCCCCCTTTAGCCTGCTGTTCCTGAGCCGCGATCGGGGTCCCAGCCAGGGCACCCCGAGCCTGGGCCCTGGCTCCACGCCCACCACCATCAAAACGGAAGTGAACGGGCACAGCAAGGCCGGCCTGCTGGCCGAGGGTCCGCCGCTGCCGGCTGCCGTCCAGGTGCCCCCCGGGCCTCCGACGGTGATGAGCCCTGGCCTCGCACCCATGCTGGCCCCCCCACCGCGCCGGACCCCCAAGCAGCACAACTGCCAGTCGTGTGGGAAGACCTTCTCCTCGGCCAGCGCCCTGCAGATCCATGAGCGCACCCACACTGGGGAGAAGCCATTTGGCTGCACCATCTGCGGGAGAGCCTTCACCACCAAGGGCAACCTCAAGGTGCACATGGGCACCCACATGTGGAACAACGCTCCCGCCAGGCGTGGCCGCCGCCTGTCGGTGGAGAACCCCATGGCCCTGCTGGGTGGCGATGCCCTGAAGTTCTCAGAGATGTTCCAGAAGGATCTGGCCGCACGGGCCATGAACGTGGACCCCAGCTTTTGGAACCAGTACGCCGCTGCCATCACCAATGGGCTGGCCATGAAGAACAACGAGATCTCCGTCATCCAGAACGGAGGCCTCCCCCAGCTCCCCGTAAGTCTCAGCGGGAGCGCCCTCCCCCCACTGGGCTCCCTGGCCGCCGGGCTGGACAAGGCACGTCCAGGCAGCAGCCCGCCCATCGCAGGGCTGGACAAAGCCAACTCGGACACGGGAGGCAGCCGGCCGTTCACACGGTTCATTGAGGATAACAAGGAGATTGGGATTAACTAGCCACGTCCCTGCCCTGTGGGTCTCCTTCTCGGTTCACCCGGAGCGGGAAAGACGTCACCGGGTGGCCGCCCGAGGTGGCCTCCTGCGCTGCCCGGTTGCGCCTTTCGAGGTGAACTTGGGAACTCAGCAACCTTGGAGATAGATCTGAGTCAGAAAGAGACGTCTTCCGAGAGCCGCCTCGGAAGCCGAAGGGGCTCAGACCACATCCGTTCCATCCCTCCAGAGCCCGCCCCGTGCCAGGGAAACTCGTCCAGTGGTCTTGTTGGAATTAGTTAGAAACTTGAACTCTGTCTTTAGAACTCTTATCTCAATGACGTGGTCCAGTGCGCCTGACGCCGGTCCCGCACAGCACCTTCCCCTGTAGAATTTATGACGTTCAGATGATGCGGGTCACAGACAATGCAGCCTGACTATAACGGCAGCTTTTGTACTGCAGAATACATCTGGCTATGTGAATTTTTTTTTTTAAAGCAAGATTTGTTTTACTATAAATAAGTGGGTGATTTCCATGCAGGCAAAATCGTGAAGTTCTGTTAGGAAACAGCATGCTTTTCGTGTGCAAGCACCTGTCAATAACAAGCCTTTTTTTTTTTTTTTTTTTTTAATTTAAATGTCTGTAGCTGCTATGTGGACAGTGGTCTCTAGTGTGGTCTGTAGCCCAGCAATTGGGAACAAGTCACAGACAGAACAAGTCACCGTGAATTATTCACAACATTATAGCAGTTGTGAGTAAATATTTCACATTATCAAAGCTGTACAATAAAAAGGTAATGTTTGTATAATGTGGTTGCAAACTCTTAATTTATACTATTGCACTTTTAGTATTTTGTATTAGGGAGGTTTGTTTATAATTTGAAAATTTTAAAAGATGTAAAGCATTTTATAAATAGTACTTTGATTGAAGGAAAATGAAAAAAAAAAAAAAAAGCTGTTACGGTCTTAGGTCAAATGATACGAGAAATCTGTGCTCCTTAACCAGGAAAACCACCAGGACTTGTCCGTTCCTCAGTAAACTAGGGCTTGCCATTTCTTACATTGAGTGATTTAACTTTTCTAGAAAGCCCATTTAAAAGCTTGACCACCCCCAACAGAACTCTGGTGAACTCGTCTTAGGGCTGTGGCACCAACATAAGCCGGGAGGGGGGAGCCGAGCAGCTGCCGTGCGGGTGTGATCTTGCTGTCCCCGCTGCTGCTTCCTCGCACGCCCTCGGACCAGATCCCAACTGCCTGCCGGCCTGGCGTTGTGTCCAATAAACCGAGAGGTGCCGGGTGTCGGGCAGTATAATCCATCACAAGCGGGACATGTTCTGGTTTCTGATTTATTTATTACCTTCTCAGAAGCAAACGAAGCGCACTGTGGTCCAGTCGCTCAAAGTGCAGGCTTGTGCTGGTGACGGTCAGCTGCTCCGAGTCAGGGAAGGGCCCCGGGCAGGTGCAAGCGGCTCGGCTGAGCCAGGCCGTGTGGACAGGTGGTGTGTTCTACCTCATTCTGTGTGCTGCACGCGTGCCGGAGTCTGAAAGTGGGGCCTCCTCCAACTGCACGGTCCCCCGGGTCATCGTGCCCGGGGGCAGCGCCGGGAGGCGAGCCTTGAGGAAGGAGGCAGGCAGTCGGCCGCCTCAGCAGAGACCGAGCTCTAGAACGATCTTCCTAACAGAGCCCCAGCAAGCGCAGACCACATCGTGTCACTGAGCAGAGTTTCAGAGCCTCACAGATGAGCAGACCTAGCGGTGGTTTCTGTCGGAAAAGAGCACGGAACCCTCCCACTGTTTCCCACAGAGGTGGGATGGAGTGAGCCCCGGGAACCCTCTCTTCTCCCAGGACGGGTGAGGGTGCGCCTGTGTCGGGAACAGAAAACAGGTGCTCGGTGTCGCTGTGTTTCAGCAGTGAATGTTGTTATTATTTATCTGTGTCCCTTTTGGTGTGATTTTTTTTTGGGGGGTGGGGGTCGTATTTGGTACCATGTAGTGTTCTGTCCTCCCAGAAAGATGTGTATATACCGTGAGAAAAGAGAAATGTAAAGTGCTGTACATAAGGCAGCTCGCGGCGGGCAGTGAGACTGCCCGGCCTGTGTCTGGGTGAGGCTGTCCGTCTGCACGGTGGAGAGACACTTATTTTTCTATTGCAGCACCGTGCAGGGCCGGGCCCTCCCTGAACCAGTGCAGAGTTGTTACCCAGATCCAATATTTTTTATGACGAAATCTGTGGCTTGACACATCTACTGATTGAAATGGATGTCTTAGTCTAGGCTCCTATTTTTGTCATATGGAATTGAATAAAATGCAGGATGTAATATTATTTCTGAATGGCGCTCCTTGATTATTCTAATGGAAAAAGTGGCATTTGAGGTTATGGTCATTGATGGTGGATGTATATTTGTGGTGTTTCTCCAAGGACAGTCAGTCAGGTCTGACAGCTTAGATTTAAGCCATATCTAAGCGTGTCTTGATCGGTCTTGAAATTTTCATGTTTCACCTTTTTCTAAAATAAAAATACAGCCTTTTGATTGTGGTTTTTTTTTAATTTACATCTTTGATGGAAGAAGATGTGGTAGAAAATGTTTAATGACTAGAGACGGTTGACAGTGTCCATAAATGACTGCACTCTGAATGACCCTCCCGTGGTGGGCCGTGAGGAAAACCTCAGTTCTTTGGGTCCCTGGAAAACTAAATAGCTGTGCCTCTAGCCGTGATTCAAAGAAGCAGGCCAGGGAAGAAGGTGCGGGGCCCTCCCTGAGCCTGTCAGTCCCAGATGAAGGGAGCCCCTCGCTTGAAAAGAAGCTTTACCTTGCCAAAAACATGTGATAAGGCATAAAACCTTACATAATTTAGTAGCTCCTGGAGTTCAACATATATAATCCATTTCTTCTTTTAAAAAAGTAACTACTGATACCTAGAAGCCACAGTGAAGTTCACCTGGGAGACGCTGGGTGTTTCTGAAGTGTTGAGAAAGGTACTAACCACTAAACAGCTGCCCAGTCCCCCGGCAGGTGTCATATGTCATGAGCCTTAGGAATTAAAACCCTGTTGATTTCAGAGCTAGAGCAGAAATTATGAGAGAAACCGACTAAATCAGATAGTCATTTTTTTAACATATGGCAATAGTCATTTAAAGTAATTAATATAAATTAAAATGTAAAAAAAAAAAGAGATTTACTTCTTAATTCAAAAATGTTTCCAGTGTAAAACCAGAGGTGTTTGGGCTTAACAAGCCTGGATATTTACTTCTTCCTGACATGAACTCTAGCTGCTCAGACAGTATATCAACAAATCATAAATGCCAACAATCCCTAAAAATTATTTATTTAAATATATTTATATTCTAAGTTGGTTGCAGGAACAATTAACATTTCAAACTAATTAAAAAGCATTGCTTAAGGGCCAAAAAGCAATTGCTGTGAAGCCCTCGCTCTTTAACTCTGTGTGTGTGGAAGCTTCCAGGCAGCCCAGGTCCCCTGCCCGCTCCCCCTCTATGCCCAGCAGGCAGCGCCCAGCGCCCGCTGCAGCGCTCAGAAGCCGAGGCAAACGTTAAGGCTGTTTGTTACCAGCGGCTGCACGGCATTTCCAGCCCACCCACCTTCAACGCGCTTTATTTATTCTGGCTGGCTGTCCAAGCCACGGAAGTCCAGACCCCTGTCTCTTCCCCTGGTGCATGCTTTCGGTGGATAATAAGGTCACATGTGTATAATTCTGCAGCCAGCCTGTCACCTTGCGAGCGTGCCAGCCGACCTGAGGACCTCGGGTTCAGCCTTTGTGTTTCGAGTCCTGTGCTCATTTGCTCGTTTCTGGGCTGAGGCACTCCTTTGCTCCTTCAAGAAGTTTTTCTAGGGGTCCAACGCGTCTTTGAAAAGCAGAGGCTGTGAAATGTTTCTGTGAGCGGGTCTGTTGGCTGATTTGAGCTACGGGAAAATCTGATCTACAAAATATTCCATGCAACACTAGGAAGATCATGAAATCCTTTTCTTTTTCACTTAAGTGGAAAACACTGTGTATTGTTTCAGCACTTTTTTATGAACGGAAAACCTTAAAATGAAATCACCATAGAAACATTCTCCTGTCCACATCTTTGTCCCAGGGTGGCGGCCGTGGGTGCATCAGTGTCGCCGAGTGGCCCTGGTCTTCCCCCAAGTGGCTCAGGCTGGGGACAGGCCAGGCTGTGCCCTGTGAGAGCCCCAGCAATTCCTCCCTTTGCTTCCCGATCAGCAACAGCGGGGGAGAATTTGATGACAATAAAATTTCCACTTCCAAAAACCAGTGTTTTGTTTTTTTTTTCTTTAAACAACTACCACTAATGTACATCTTTCTTCCCTGCCC EMBV3_08612 GTTTGCCATTGAAAAGTTTAGTCTCATTTAGAAAAATTGAAAGTGCACAGCACTTAAAGG Gene GeneID:541071|NCOA7:NM_001102254:18_cdna Constitutive 3 NULL GeneID:541071 9 GENE NCOA7 MGC151725 nuclear receptor coactivator 7 EMBV3_31644 ACTACATGATGGAATCTGTGCTGGTGACCCTCTTCTGCTGCCTGCTCACCGGGCTTATCG Gene GeneID:784457|LOC784457:XM_002691609:242_cdna Constitutive 0 NULL GeneID:784457 11 GENE LOC784457 NULL similar to NG5 protein EMBV3_01052 TGTGCTACCTTTAGGTGATGCTAAAAAATGCACCTATATTCCAAGTGCCTACTCCCTTTG Gene BVT0102_188127 + 0 NULL GK000016.2:13318322-13512072 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33984 AAAATGACTTGCTTTTTTGAAAGGAGATGGTTGGTGTCATGCTGGGCATCCTCCTGCAGC Gene GeneID:538147|DGKE:XM_002695555:53_cdna Constitutive 0 NULL GeneID:538147 19 GENE DGKE NULL diacylglycerol kinase, epsilon 64kDa EMBV3_35599 TTCTGCATGGATGTTAGGAATCCAGGCTCGTAGTTCAGCCCAGACCTCCCTGCATGAGTT Gene BVV0102_073603 - 0 NULL GK000009.2:41802335-42008576 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237224 TCONS_00237221 TCONS_00237228 TCONS_00237216 TCONS_00237225 TCONS_00237226 TCONS_00237217 TCONS_00237220 TCONS_00237227 TCONS_00237219 TCONS_00237223 TCONS_00237218 TCONS_00237215 TCONS_00237229 TCONS_00237222 1 XLOC_144663 Coding TCONS_00237216 XLOC_144663 Coding Coding FOXO3 9:41989615-42015732 j TSS177381 6258 1 TCONS_00237216_3 453 0.0150207734100352 3 0.760491652626742 0.00192933496609038 0.00312482507397893 0.000849803193721451 0.0018023812606207 0.00185263597183634 2.87138220895999e-05 0.00136163102851477 0.00209114619354332 0.00145374582670005 0.000542920180672791 0.000204063753101585 8.16359257821428e-09 0.000343692103294002 0.00183745333927801 0.00105215323336265 0.00403172558696127 0.00029467296786122 0.00602262745683378 0.00213448068241804 0.00546429166022739 0.00210380945126153 0.00051846072617361 0.000698341456918887 0.00117207078729699 0.00589618521626693 0.000854758730658594 0.00314047614691295 6.17700491860733e-07 1.61248260034233e-08 4.70566269833621e-05 XM_005210804.1 FOXO3 PREDICTED: Bos taurus forkhead box O3 (FOXO3), transcript variant 0.0 1.123e+04 100.00 0.994886545222116 NM_201559.2 FOXO3 Homo sapiens forkhead box O3 (FOXO3), transcript variant 2, mRNA. 0.0 4699 80.74 0.78938958133589 TCONS_00237216_3 sp|O43524|FOXO3_HUMAN FOXO3_HUMAN Forkhead box protein O3; 0.0 820 97.13 0.997792494481236 0 coding 1 1 1 1 -0.0271343488323166 0.831167836475304 0.00285128907446244 0.951537862711203 GCTGGTGTCTGGGTTAGTGGACAGTCTTTACAAGAACTCTATCCGGCACAACCTGTCACTGCACAGCCGGTTCATGCGGGTCCAGAATGAGGGAACCGGCAAGAGCTCGTGGTGGATCATCAACCCTGACGGCGGGAAGAGTGGCAAGGCGCCCCGGCGGCGGGCCGTCTCCATGGACAACAGCAACAAGTACACCAAGAGCCGCGGCCGTGCAGCCAAGAAGAAGGCAGCCCTGCAGACCGCCCCCGAGTCAGCAGATGACAGTCCCTCCCAGCTCTCCAAGTGGCCCGGCAGCCCCACATCCCGCAGCAGCGATGAGCTGGACGCGTGGACCGACTTCCGCTCGCGCACCAATTCCAACGCCAGCACAGTCAGCGGCCGCCTGTCCCCCATCCTGGCGAGCACGGAGCTGGACGACGTCCAGGACGATGATGCACCACTGTCCCCCATGCTCTATAGCAGCTCGGCCAGCCTGTCGCCCTCCGTCAGCAAGCCGTGCACTGTGGAGCTGCCCCGGCTGACCGACATGGCGGGCACCATGAATCTGAACGACGGGCTGGCCGACAACCTCATGGACGACCTGCTGGACAATATCGCGCTCCCTGCATCCCAGCCATCGCCCCCGGGGGGGCTCATGCAGCGCAGCTCCAGCTTCCCGTACACCACCAAGGGCTCCGGCCTGGGCTCCCCCACCAGCTCCTTCAGCAGCGCGGTATTTGGTCCCTCGTCTCTGAACTCCCTGCGCCAGTCTCCCATGCAGACCATCCAAGAGAACAAGCCAGCCACCTTCTCTTCCATGTCCCACTACGGCAACCAGACACTCCAGGACCTGCTCACATCGGACTCACTCAGCCACAGCGATGTCATGATGACCCAGTCGGACCCCTTGATGTCTCAGGCCAGCACCGCTGTGTCCGCCCAGAACTCCCGCCGGAACGTGATGCTTCGCAGTGACCCAATGATGTCCTTTGCCGCCCAGCCTAACCAGGGGAGTTTGGTCAATCAGAACTTGCTCCACCACCAGCACCAAACCCAGGGCGCTCTCGGTGGCAGCCGTGCCTTGTCGAATTCCGTCAGCAACATGGGCTTGAGCGACTCCAGCAGCCTCGGGTCAGCCAAACACCAGCAACAGTCTCCCGTCAGCCAGTCTATGCAAACCCTCTCGGACTCTGTCTCAGGCTCCTCCTTGTACTCAACCAGTGCGAACCTTCCAGTCATGGGTCACGAGAAGTTCCCCAGCGACTTGGACCTGGACATGTTCAATGGGAGCTTGGAATGTGACATGGAGTCCATTATCCGTAGCGAACTCATGGATGCTGATGGGTTGGATTTTAACTTTGATTCCCTCATCTCCACACAGAACGTTGTTGGTTTGAACGTGGGGAGCTTCACTGGTGCTAAGCAGGCCTCATCTCAGAGCTGGGTGCCAGGCTGAAGGCTCACTGAGGAAAGGGGAAGTGGGCAGAGCAGACCCTCAAACTGACGCAAGACCTACCGAGAAAACCCTTTGCCAAATCTGCTCTCAGCAAGTGGACAGTGATACCGTTTACAGCTTAACACCTTTGTGAGCCCGCGCGTTTCCCACCCCAGCAGAGACTGTTATCGGCCCCTTCCCCTGGGTGAAGCACTTACCCTCGCACAGAACTCTCTCTATAATGTATGCAAAACCTTCTTTGTACGGGGTGACAGCCACCTGCCAGCGAAGGACAGCACCTGCCAGCACCGCCCACCCCGTTCAGAGCACACCGTCAGCCGGCGGGCCATCCTTTGGTGTTTTAATAGCGCGATGGTTTATGGGATGTGTTAAGCGTTGTTTTGTGTTCGTTTTCCTTTGACTTTCAGTTTCTCACATGCATTGACTTGGAGTCTTTTTATGTTAAAGTGTTAACCATCCTTCCCCTGGCACATTTACAAACAGAAAATGTACCAGCTACTGCGCTGGCTTTGGGTGTCACAAACGTCCAAACCTGTAGAACTCCCCAAACTAACATATTACGTAAACTAGAGGAGGTTTTTCTGTCTTCTCTACTTTGGTAGAAAACTATTGTTTTCTTAAAAAAAAAAAGTCAACAGTGGCACGAGTGTTGGCTGTGCACAGCGGCCCAGGACAGAGCCCTGCATCTGCAAACTGAAGGGTGCCCAGCGTCTGCCCCCGAGTGCTGGTCCTGAGTCAGGGCGGTCGGGCGACAGTACCCTGGCCCTGGCCTGCAGTTGCCAGATGGGTTTGGCCTGCGGTCTCCTGTCAGTATCCTCAGCTCACGCAGTCACAGTGATCATACGCTGGTTAAAAATTAGGATCTCTTCGAGAAGAAATCTGCTCAGCTCTTCACTCATTGCCAAAGGCCACTAATGGATTTAGTTTTAAGGAGAAAAGAAAAGGAAAAAAAAAAAAACGTAGTCTTGTTTTGCTTTGCAGAAGTGAACTTACAGGTAAACATTAAGCCTGCAGTGAGAAATGTGTGGAAAGTACAAACCCGAGTCACTCTTTTTTCTAAATGCACACCCTTGATTACTTTTAGCCTTGCTCTGTATAATCTGATCTAGTAGACGTGTATGAAGGAGAGGCAATAGCATACAAACTGATTCTTTTTTTTAATATAAATAAGCTTAGGTTGTTAATTATACAAGTGACTCAATGGAAGTACAAGATAGGGCCGTTTTGACCTCCCTCCTCCCACTTTTCCTGCTTGTATGGATTTCATTTTTTTCTTTTCAAAAAGTTATGGTGCTGTATAGGTGCTTTCTGTTTAACCCAGAAAGTGTGATTATATTAGTTGCCCTCTTTGGTAGACAGAGTAGTTGGGAACACCTTTGGTACATATGAAACTGGGACAATGAAGCTCTGATTGGCACAGCATATGCATACTTCTCCAAAAAGGTATATGAAGACTCTTTTCTTGCATATAAAGCATTAGGCATACAAATGTATAAATATATTTTATCATGTACAGTTACAAAAACGGAACATTCTGCATGGATGTTAGGAATCCAGGCTCGTAGTTCAGCCCAGACCTCCCTGCATGAGTTCTCGCAGACACTTGCACCATGCAGTGGGCGCTGACTCCCCCACCAACTCAGACATGCCACCCGACCACCTGCACCCACCACCAGCCACCAGGGGCCCCCTTGCGCATCTTTGCTTCCTGATTCCTCTGGGGGTGACGGTGGTGGTGATAACAGCTCCTAGCATAATGAAAGTTCCATTTGGTGTTGTCACTTGTCTCTCCCGCCTCGCTTAGGTTGTCATGTTTGAGTGATGGCCCCGTTGATTTCACCCTGCCTTTTACTGAATCTGTAAATTGTTGTGCAGTTTGTGGTTATAGTAGACCTGTAGCCTATTGCCTTTTCTGAACTGCTCCAAGTTTATAATCTTCATTTTGAAAGTATGTATAATTTTTGAAAATATGTATTCTATTCACGCAATCTGCTTCTCAGTGAGACAGACTTTTGCTTACCATATTCCTCTGTAGTAAGGCTAGCCCCCTCCTCGAGTCTTTGGTGGTCTGCTGTTCATGAGGACTGTCCATTGTCCGTGAGAGGGGGCTGCTCTCTGGGTTCCTAAGTGATGCTGCCCTCGGTGAAGACACAGTTTGGTCAGGGACGGGAGGGACCAGGGGGTATCGGATTCAGGAGAGAATCCAAAGTGCTTCCAACACAAGGGCCCTGAGACTTTCTCTCCTGAGCTCAGAGAAACAAGAAAACTAACAAAATAGCTATTTGCCTTTGCAGTTTTCTAGACCGTGGAAACTACTTTGGGAGTAGAAAGGCAACCCTCAAATGTGTTTCAACTTTAAAATGTTGAATTCCTTTCAGACCTGTGGCATCTCATTTATTCTCCCCCCTGCCCCAATGTTTGTTAGATTTCAGGCAGAATGTCTTATAAAATGTCCTAGAACCAGATTATAATTTAATTGAAAACAGCTGAGGGAGGGATGGAGCTGGGGTGTGAGAGCAAGACAGCCATGGAACAGATCAGGAAAATGGAGAGGGAGGGGGGGCTTTGAATCTTTTCTTTACTTTTTATTTTTTAAAAAGTAACTCAGCATCTACATGTAGAGTATCATGGACAGCTGAGATCAGGGCAAAGTCAGGTGCCAGCATCAGTCTAGAAAGGGTCAGGCAAGAATGGAATAGTTAGGCTTGTCCAGGATCACACAGCCTTGCTCTCACCCTTGGCCACTCACCTGGAGGCCAGGATCCCTTAGACTAACCAGGTCCTGCCACAGTCAGACGAGGCAGGGTAGAGGTGCCATCTTCTGTTAAGACCCTGCTTTCAGGAAGGGCCACTAGTGGCCACCATGTGAAGTTTTGAGTCTCACAGGAAGTTTTCTGACCTGGAGCGTCTCAGTGGAATACTCAGTAGCCTCCGGGGGTCTGGCAGTCATAATGTTTGCTTCCTGATGCAAACTCGCACAGTCTACCCTCAGCCTCTCATTAAGCTGCTCTAGGGAGCCTTCCACTTTTTGATGGGAAATTTAGAAAGAAGAGTAACAATGTTGAAAACATGACCTGAACTCTGGGGTTCTGTTGTTACCTTCAAGGTTCCAGAACCAGAAACCTTTTACCAAAGTTAGAAAAGAGCTTTATCACAAGCCTTCCCTGTCCTGGCATGAGGCCGCCAGACTCAAGAGTATCCTATTAACTGTGAATGAATCTGAGGTCAGTTCCCTTTATTGCGGAAACACATTCTTTGAAGATTTCAGAAGTTCGTCTTTGCTGTTAGCAGGTGGAGCGTGTTTACACGTGTACCGGTGGACTGTGGGGGGGCCAGGGCTTGGTGTTGGGTTTCAGCCCTGTGTGTGTCGCTTCCCCACTCTGAGAAGACCTCATGGCCCACTACTCAGGACAGGTATGCCCAGTCTCAGGGTGTCATTTCAGGCAGCTTCTGAACCTGTTAAAGATGGAAGGGAGTCTATCTCATGAACCCCAACTTAAAGAATAAGGAATATTAGAATCTCTTGGAAAGCCCATGTTTTTTTGTGCTGATGCCAAGGGCTGGTGAAGGAAAATAAGTTACCTTTTCTCTCTCAAAGCAGAAACAAAATCCTGACAGGTCCGAACTGTGATTTCCTCTTGGTGTATTTGGGAACCGTTGATTATGTATAACGTATTTTTTTAAATTAAGAAAAGCAAAAATTTTTTGTAGAAATTCAGTCGCTGGCAAAGAGGTACAAACAGCCAGCCTCTCCTGGAGACCAGGGGTGGCAGGGTGCAGCAAGGGGAGAGAGCAGTCCTTGTGAAATCCCGTCTGTCAGAGCCCAGGGACTGAGAAGAGTGCAGCTGGCCCCGAGTACACACGGGCTCCACATCCTCAGAGTCAGCCAGCCGCGGGTCCGGAGGGCCAGTTGTACTGCCTTTTTATATAAGGGACTTGGGCATTCGCGGATGTAGGCGGGGGGATGGAGTCCTGCAACCAGTCCCCCACGGATACCGGGGGTGACTGTGTATTATATTTGACCTAGATCTTTAGTGGGTAACATTTTATGCAGTTTGAATGAATAAAAATATTTTCCTTTTGTTTAGTTTTATTTGTATGTATTTTACTTTGATGAATGATTGGTTCCGAGGCCTCTGCCACACTCCAGAAATACTTGTGTGGCTGCTTTAAAAAAAAAAAAAAGCTGTGTGTCTGGTCACTTATTTCTCTAAAATTATCTCATTGCCTGGCAATCAATCTTCTCTCAATATAGTTGTCCTAGCACATTATGTACACAGGAAATGTAAACAGATGTGAAGGAGGACCAGAAAAAAAAAGTTGATAATAAAGAAAAATGTATGTTTTGGCTTCACATGTTTAACATTTTTTTTTTAAGAAAAAAGTTGCATGAATGGAAAAAAAATCTGTATACAGTATCTGTAAAACTGTCTTATCTGTTTCAATTTCTTGCTCATACCCCATACAAACTAGAACTCAGTGTGGTGCATGGCTGTATTCAAACACCTGAGAGTCATGCAGTTGATCCTTTGGTTTGAAGCACCTCATCCTTTCTTTCAAAGCGAACACTATCATATTGCATTCTTACTGAGGATTTTGTCTGTCCATATGTTACCATGAAATATCTCTACCACCTTTTGTCTCAAGAATCCAAAACCAGTTTGATTTGGGAATCTTCTCCTTTCCAAGTGAAATAGAGATGCAGTACTTAACTTTCCTTGGTGTTTGTAGGTATTGCCTTGTGTATTCCATTTAAAACCGTAATCTAGTTTGTAAAAGCAATGGTGACGCATGTAAATAAAGCATCAATGACACTCTACCTT EMBV3_29110 TCCAGGATCATTGACCACTTCCTATGTGACCCAGGTCCCTTGTTGGCCCTCACTTGTACT Gene GeneID:783998|LOC783998:XM_002690750:487_cdna Constitutive 0 NULL GeneID:783998 10 GENE LOC783998 NULL similar to olfactory receptor Olr1615 EMBV3_34807 CAAAAACACTCAACCCCGCATGCTGCATTCCAGCCAAATTCCCAGATTGGCGAGGAAATG Gene BVV0102_185436 + 0 NULL GK000010.2:21597201-21626431 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013075 TCONS_00013078 TCONS_00013079 TCONS_00013080 TCONS_00013074 TCONS_00013081 TCONS_00013076 TCONS_00013077 1 XLOC_007989 Coding TCONS_00013074 XLOC_007989 Coding Coding ACIN1 10:21597198-21614390 j TSS9756 6690 1 TCONS_00013074_1 169 0.558445440956652 6 0.611191902739806 0 3.31164765750078e-05 3.67055134589482e-07 0 0 0 2.18221443952405e-06 9.04222492354885e-07 2.49506195907391e-05 0.000166108023124528 0.000161898132846752 3.85388156797419e-05 2.23858199278591e-05 3.53712095749166e-05 4.84466259899749e-05 0.0175405244886943 0.00815200489444215 0.0158138218987052 0 8.36860175910622e-07 1.85132281911715e-05 0.00465821436840327 0.00425148696603939 0.00681467411087809 1.45747604916891e-06 4.00020658359659e-06 1.16246133343556e-06 0.000704791948956776 0.000170835513086571 0.000557952672845172 XR_238500.1 LOC788150 PREDICTED: Bos taurus zinc finger protein 480-like (LOC788150), 0.0 1994 86.66 0.238266068759342 XM_005267415.1 ACIN1 PREDICTED: Homo sapiens apoptotic chromatin condensation inducer 1 (ACIN1), transcript variant X1, mRNA. 0.0 829 97.74 0.0726457399103139 TCONS_00013074_1 sp|Q9UKV3|ACINU_HUMAN ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus; 9e-83 268 96.93 0.958579881656805 1 coding 0 0 0 0 -0.354756730332637 0.0292222273198827 -0.000476812614915501 0.991736035152748 ATCCGAAGATGCCCGAAGCCGTCGGGACGGACCCGAGTACCTCACGCAAGATGGCGGAGCTGGAGGAGGTGACTCTGGACGGGAAGCCTCTTCAGGCGCTGCGGGTGACCGACCTGAAGGCCGCACTGGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGAGTGCCCTGGTCAAGCGGCTCAAAGGGGCTCTAATGCTAGAAAATTTACAAAAACACTCAACCCCGCATGCTGCATTCCAGCCAAATTCCCAGATTGGCGAGGAAATGAGCCAGAACAGTTTCATAAAGCAGTATCTGGAAAAGCAGCAGGAGCTGCTTAGGCAGCGTTTGGAACGTGAAGCTCGAGAAGCTGCAGAACTTGAAGAAGCTTCAGCTGAGTCGGAGGACGAGATGATCCATCCCGAGAGAGTGGCTTCCCTGCTGCCTCCTGACTTTCAGAGCAGCCTGGAGAGACCAGAGCTGGAGCTCAGCAGACATTCACCCATAAGAGCTGCGGAGACATTTTTGGACAGCTGATCGACAAACGAGGCCGTATGCACTTGTTTTGACAAGGCAACAGCAGAAACCATAACTGATGCAGTTATGGCAATCAAAGCTGTTATTCCCACAACCAGAGCTGCAATGAATTGCTTAGGTCGAGAAATTAAATTAAGTTCATATAAAACTTTCAGTGCATAATCTTCAAACCATTGTCCCTCTAATTTTACAGGAACCATCAAATATGGTGGTTGCTTTACAATCATCACAGCCTTATAATTATAATCATTCCCATCAACACAATTCTATATAAAACAATTCACACATATAACATTGTAAACAGTTTCTTCTTCAGAAACTTCCAAATCACTCTGATTTCTGGCCAACAAAAAGGCATAGGGAGAATGCATGCAGGCCCGTACAATATATCTTTGTTCATTTAAAGGTCTATGTAAAATCACAGGTGCCATAGCAGCCAATACTTTCCATAACTCAGGCTGCATGGGACCCGTTCCATCGAAGCTCACTAAAGGAGGAACCCATCCATTAGCATGCCACCTAGTAATTACTAAAGGCATAGGGAGAAATGAATTATTCCATGTGGACCTATAAGGTTCTACATAAATCAAGCCCCATCGTTGATTCAAAAGATTGGGGTACCCTCATTTGGTCAGAAAATGTCTGGTGGCAGCAATGGGAATAGATAACTTTATGGCGTACATGCATTCTTTCCAACTAGGAAAGCCAGAAATTCTGCTTATGCTTTCCCAGGCCTGTAGTCCTTGTTCATCAGAGTCTGAAGTTGGGAGTGCACAACTCGGATAGTCCTTTAAATGAGGGGCTGCTTTTTAAAGGCATCAAATAGTCTTTCTTGCGCCCCTGGCATCAGCAGCTGTAAAGACCAAAAGTCTCTCTTGCCATCGCTTCTTGGAGAATCAGTAAGCATGCCTTTCAAGGAAGTGCTAACGCATCCATTCAAAACTGGAGCTGCTTCTTGTAGAGAGGAAGGTATGGCAAAGCAAATAGGTGGATAAATGGACGCGCCCGAAAAATTGAAGGGAGTGCTGACCACTGTTTTAACATTATTAGGATAGATAGAAGCCCCGCCCAAAAGAAGAGTATCATTAACAAAAACACATTCATTCATCCAATCAGTAGGCTGGGAAGAAGGTGGATTAGGCAAATGAGCCCAATGAACTTTTTCTGTGCTGGAGGGCCTCAGCTGACAAGCTAACACAGCAAGCATAACCACAAACATTACCATAGGAGTGGCCTCATATGTCCCCCTTTCTATTAATTCTTCAGCCCGCTGAGCGAGATGTTTTAGCTGGCCCCAAGTTGGTACAGTGCTGGAGGTGATTGTTTAAGTACAATAACTGTGACGAGGTGGGGCAGAATATGGTTGAACTCAATCAGCATGTCTCTCCTGAAGCGCCAGGTGCCTGAAGCGATGTACTAGCAGTGAAGCCTCAGGCAAAGGGTCACTCGCCCTTTGGCGTTTCCTTGGCTCCCTCAGGTCTGGACTCTACGAGCTTCTGGTCTCTCCATCTTTCCTCGGTTCCGGACTCCAGGACCCCAGGGATTTTAGTAACCTCAGGGGTCCAAACAGTAGAAGTGGAATCCTGTGGAAACACAAAAGCATACCCTCTCCCACAAGTTAGCAGTATATCTGGCCTTCTCCATTCTCCTGTAAGGAGGTCTTTCAACTTAACCAGAGGCCAAGTCGTAGCCCCTTCAGGAGTCCAGTGTCTCGTCATTGCAGTCTGCCCCTGTGTGTCCACGTTTAAATGATTAATTACAAACAAAGCATAGTGTAAAACATGATGCGGAGAGGAATATTTAAATTCTCCCTGTCTTAATTTAGCTATCTGACTTTTTAAAGTCTGGTGCACCCTTTCCACTATGGCTTGGCTTTGGGGATTATAAAGTATTCCGGTTGAATGTAGTATGGAAAATTGTTGACAAATCTCTTAAAAGTGGCAGAATTATAAGCTGGGGCATTATCTGTTTTTATCTGTTCGGGGAGTCTTATTTGGGAAAAGCTTTGAAACAAGTGCTGAATTACATCTCTTGTTGCTTCACCTGATCTAGCAGAGGCTATAATAACACGAAAAAAGGTATCCACAGTAACATGCACTAAGGACAGTTTTCCAAAGGCCGCGATATGAGTTACATCCATTTGCCAGAGAGCATTAGGCCTAAGGCCTCTGGGATTTACTCCTAATGGTGGAGATGGATTAAATGTTGGGCAATTTGGACATAACTATTTGTCTAGCTGCTTCCCTAGGGATATGAAATTCGTACCTTAAACCAGCTGCATTTTGATGATGAATTTTGTGAGAATTTTTGGCCTTGTCAATCTTGTCATGTAAGTTTAAAGCAATGACTTTAGTTAATGCATCTGCCAAAGCACTTCCTTCATGCAAAGGGCCAGGCAAGCCGGAATGGGCTCTAATATGTCCCACAAAATATTTCTTATCTCTATGCTTAATCTCCTTCTGTAAATCAAATAACAGGGAGAATATAGTAATCTCATTTTCTAGAATATTAGTAGTCTCAGTATGAGGAAATAACCCTACAGTATATCGGGAGTCAGTCAAAAGATTGAAGGCGTGGTTTCTTAAATGTTGAAAAGCCCAAATAACCGCCCTCAACTCAGCTCTCTGGGCCGATGTCTCTTCAGTTACCTGAACATGGGATTTTCCATCAATAATTGTGACTGCTTAAACATTAGAGGAACCATCTGTGAAAACTAAAATTGCCCTTTCCAAAGGTTGAATAGAAAATTTCTTCGGAAAAAATCACTGGATGTGTTTTCAAAAAATGCAGTAGGGGGCTTGAGGGCAAATGAAACAAAATTTGACCCCTGAAATCTATCAGGGTAACTTGCCAATCATTACTATTTTGTAAAAGAAATTGCAGTTGATCCTTATTGAATGGAATCACTATATTTGCTACTTCTTTTTCAAAAAGTTCCACACTTCTTTTTCTACCTTTTATAATTAATTGTGCTACCAAGCTAGGATAAGATAAAATTATTTTTCTTGGGGTCACTGGTATATGGAGCCATTCCAATGGGCCTTCTTGCCACAAGCATCCTGTAGGTGTATGCTCTGTGGCGAGAATAATTAAATCTCATCCTCTGGTAATATTAATCCTAATTAACTGATCATTTAAAGCCTCATCCACTTTAACAAGAGCCGACTCTGCCTCACTAGTCAACTTTCTCTTAGAACTGGGATTAGGATCGCTTTTTAAGCAATCAAACAGAGGCTTTAAATCTGCAGTGGTCAGTTTTAAATGTGGGTGTATCCAATTAATATTTCCTAATAATTTCTGGAAATCATTTAAAGTTAGTAAAGGATTTCTCCGAATGACTCATGGTATGGGTATTTAATACCCTCCCTAAATAAGAAAAAGGATTTACTTGCATCTTATCTGGCACTATCTTTAAACCCCAGCTTTCCAAGGCCTCAATCAATTCAGATAAAATTTGTTGCAACAAGGCTCTATCCTTATGAGCTGCCAAAATATCATCCATATAATGTGTCACATATAGATCTTTATACTTTGTTCTAGCATTTTGTAGAGCTTGGTCTACAAAATTCTGACACAAGGTAGGGCTATTTTTCATTCCCTGAGGCAAAACCATCCGTTGAAACCTCCTGTAGGGCTGTTTAAAATTAGCTGAAGGGAGACTGAAACCAAACCGTTTATAATCTTGATCAGCCAGGGGAATGGCAAAGAAACAGTCCTGTAGACCTGTAACTATCACACTATACTGAGAAGGCACAGCCACTGGGGAAGGGAGGCCCGGCTGGAGGGCCCCCATGTCTTCCATAGTTGGGTTTATAGCTCTCAAATCTTGTAACAATCTCCATTTTCCTGATGTTTTCTTAATAACAAAAATAGGAGTATTCAGGGGCTATTAGAAGGCTCTATATGGCCGGCTGCCAGTTGTTCCATAACTAAATCCTCAGCTGCCTGTAACTTTTCAGCTGTTAATGGCCATTGCTCCACCCATACCGAGTCATCAGATTTCCAGGTAATAGGGTCGGCAGCAAGAGCAACAGGCCCTAGGATAAATTTGAATATCCCAGACCTTCTGTATTTTTGTTAAGAACCGTCTCTAATGGAGAAACAATTTCCTGCTGATCTTTACCAAGCCCTTTATCAGGATTATAGCTCATTTTCAGCATTTGATTAGTAACCTTTTCATCTGGGCTATATAAAAGCATTCCCATCTGAGATAATATATCTCTCCCCCATAAAGAAAAAGGTAGTGAAGGAACCACATATGGACAAAGTGCTTTATGCCCCCTTCTCATCTGACCATGTCAAAATTTGTGAGCCCTTAGCAACCGAGGGCACTGACCCTATTCCTACCAGGCCGGCACTGGTCAAGCGTGTCGGCCAGGATGAGGGACAGTCTTTTCCAGCAATGCAAGAGACATCTGCTCCAGTATCTAACAGCCCTGACATTTTATTTCCTTGAATTAAAAGATCTTTTAAAGGCCTAGAAGCTGTAGTTTCCTGCACCCAAAAAGTTAGATCACTAGATCCAAATCCTCTGGGGCCCCTAGCTTGAGAAGTCAAGGTTTTTCCTGTCTGATAATAAGGTGAAAGCAAAAGCTGTGCTATTCTTTGACCTTAATTAATTTGCACAGTTTTAGTAGGTGGCGAGATCAAAACTTTAATTTCCCCAGTATAATCAGAATCTACCACACTAGGCACCACCGAAGTTCCTTGAAAAGAAAGCAAGCTACGCCCCAGCACAAGTCCTACAATGCCCTCAGGTAGGGGGCCAGCCACTCAATGTCAGGGGTTAATATTGTTGCTGTGGTGGAACTGAGGTCCAGTCCTGCGCTACCTGGGGTTGATTGGCACAACTTGTTGTCCCTGCTTGGCGGGACATTGCTGGCAAAAATGCCCCATTTGGCCACAAGAGAAACATTTTTTATTTGTAGAATCGTTTCCATTACGATTAATTTTTTTTTTAAGCCTGGGTGAGGCCCCCTGAGGAGGTTTTCTCCAAGGAGCAGGCTCTGTATATTGTGCATGCATCTGCTTTAAAAGCTCCTTTGTTTCAAAAAAAACTCTATCTTTCTCAGCCTTAGGTAATACTCTGGGAGGCTTTGGAGGCAAAGTGGGGAACTCCTGGGCCCTGGGAGGCACAAGTGGAGGTGGCGGTAGTCACCTTAAATCAGTTGCGTAGAGGAAGAAGGGGCTCGCCAGGGCACCGGCCGCAGCGTCCTGTAAGCCCTCTCCTTCCTCGGGAGGCAGAGCACAGTCTCCCTCCTTTACTTCATCAATGGCAGAAAACATGATCTGCACAGAAGGTGGAGACCCACCACCATCCACCACTATAGCCTCCCCCATAGACTATCTTAACAGCCTCATGACGAGGGTCCAGGACATTTCTAATCATATTCCACAGAGCAAAACCATCTACGGGAACCTTTTCTGGCCTATGCAAAGTATAAAACAAATGTAGAAATTTAGACGGTCTTCCTGTGCTTGCTTTAACACCTCTATGGGCTAACATATGAAATAATATTTCAATAAACATTTGTCTATTCTTAGATGCAGAGAAACCCATTCTTCTAAGACTATACTTTCAGGGATCATTTCTATAGTTCGTTACTAGAGAAGTTTCTCTGATCGTGTAGAGCACCAAGATTAGCAAAGGCCTCAAAAAAAAAAAAAAAGAAACCCATTCTTCTAGAGAATATTCTTACTGATTCTATAGCCTCCTCACCCTGCCTAAACTGCAAAGGGGTGCCGGCCACCCACAGGTACAGTCCTAACCGTCCCGCGTTACATTCCCAGAATCACTTACTCTTCAGTGTCCCCTGTTCTGGGCGCCACTGGCCGGAGTCCAACTCCAGCAACCAGGGATTCAACCTGAAGAGATGGACGGTGTCGGCGAGAGAAATGAGGCAGCCTCTCAGTTTTCTATGGACTGCCTGTTTATTCCAAGTTTAAGATTCTCTTTTATACTTTTACAAAAACATTAGGCCAGAGGTTTGACATTTTCAGTTCCCCCTCTCCCAGATTTATCATCTCCATAAATCACTGTTGCTCTTCAAACAGAGTTCCTGCTTCAATGATTCTCTGGGAATCAGCCTTATCTATTATCTGCCTCTTGTAAGTGTCCCATAGTTAACTTGTGATTACATTGTAACTCATGCTACATTCTTCAGTTTACTAC EMBV3_18572 CATTTCCGGCCTCATTTACGAGGAGACCCGAGGCGTGTTGAAGGTGTTTCTGGAGAATGT Gene GeneID:516742|LOC516742:XM_002686058:289_cdna Constitutive 0 NULL GeneID:516742 3 GENE LOC516742 NULL similar to Histone H4 replacement CG3379-PC EMBV3_15880 TGCTTCAACGCCCTGGTGCATTTCGCGCTGGGAAAGAATATGGCAAAGCTGATGCAAGAT Variant GeneID:512958|EBPL:XM_002691791:413_cdna 213^282 1 EMBV3_14795 GeneID:512958 12 GENE EBPL NULL emopamil binding protein-like EMBV3_31418 AGGACCAAGTTCAAGTTCCCTGGCCACCAGAAGATCCACATCTCCAAGAAGCGGGGATTT Gene GeneID:100336186|LOC100336186:XM_002686664:113_cdna Constitutive 0 NULL GeneID:100336186 4 GENE LOC100336186 NULL ribosomal protein 10-like EMBV3_01112 AGCAAGAAGGACTCAAATCTCTACCAGCTGCCCCCATCATTGCTCCGGAGACTCTATGAT Gene GeneID:281513|TAC3:NM_181017:902_cdna Constitutive 1 NULL GeneID:281513 5 GENE TAC3 NULL tachykinin 3 EMBV3_11024 AAATAAACCCTAAGCGAAGAGGTGTGGCGAGCTTCTGGGTTGTTGAACACATGGAGGTGC Gene BVV0102_300696 - 1 EMBV3_18446 GK000020.2:41042095-41122022 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117278 1 XLOC_071444 NonCoding TCONS_00117278 XLOC_071444 NonCoding NonCoding - 20:41105293-41106110 - TSS87746 817 2 TCONS_00117278_2 55 0.886168910648715 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.12289372907547e-05 0.00038987642878749 0 0 0 0 0 0 XM_005223810.1 SLC17A4 PREDICTED: Bos taurus solute carrier family 17, member 4 (SLC17A4), 2e-15 87.8 70.87 0.22766217870257 XR_247716.1 LOC101928940 PREDICTED: Homo sapiens uncharacterized LOC101928940 (LOC101928940), misc_RNA. 8e-20 102 75.95 0.187270501835985 0 noncoding 0 0 0 0 -0.000817565067301629 0.993583511659012 0.0372767600826647 0.584181828407733 CTATTTGGTCTCCAGCCTGTTTGGTACCTGGATTTCTGAAGTGGTAAGTGTCTTGCTGTTTGCTAATGAGATGACTGGGAGCTCCTGGACAGCCTCAGGGTGGGGGCTGATTGCCAAGGGAACCAAGCTAGTGATTAGAGAGTTGGAACTTTCAGCTCCACACCTTAATCTCTGGGGAGGAGAGATGATCAAGTTAATCACTATAGGCCAACGATTTAATCAGTTGTGTCTACAGTAATGGGGTCTTCATAAAAAATAAATGAAAATAAACCCTAAGCGAAGAGGTGTGGCGAGCTTCTGGGTTGTTGAACACATGGAGGTGCCAGGAGGCCCTGTTCTCCACCCTGGGCATCTCCTCCATCTGGCTGTTCCTGAGTTGTATCCTTGTACAATGCACTGTAATCTAGTGAGTCAACTGTTATTCTGATTTCTGGAGCTGTTCTAGCAAATTATCAAGCCTCTAGTTTATAGCTGGTCCATCAGAATCACAGGTGACAATCTGGACGTGTCAGCATCTGAAGTGGAGGAGGGAAGTCTTGAGGGCCTGAGCTCTTAAACCTCTAAGATCTGACTCTAATTCCAGGCAGTGTCAAAACTGATTTAAAGGACCCATAGTTGGTGTCTATAAATAACTGGAGAATTGCTTGCTGTAAGGGAGGGATAAAAATTCGTATTACGAGACCAGACGAATTTTTCCACACCAGTTTTTCCCTAACACCAGTGCCTAACACAAAGCGTGGTACTGGTCCAAAATGAATTAAGTACAGAAACTGAGAGTAGGTGCCCAGAAACACTTTACAGGAACTTGACATTGGTG TCONS_00115090 . 3' 4038 TCONS_00115090 . 3' 4854 EMBV3_13065 TTTTTCTGAAGCCGGAAGAAAACCCAGCGATTTACCTAGTCACTCGGCGGCCTTTGGACT Gene BVT0102_039664 + 0 NULL GK000016.2:29876191-29911423 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00072070 1 XLOC_043839 NonCoding TCONS_00072070 XLOC_043839 NonCoding NonCoding - 16:29888245-29888957 - TSS53914 712 1 TCONS_00072070_3 83 1 0 0 0 0 0 0 0 0.000114668018166812 0 0 0 0 5.02202605167451e-06 0 0 0 0 0 0 0.00101722568881953 0 0 0 0 0 0 0 0 0 0 0 0 noncoding GTTCCGACTGGGGGAGGTATGAGCGTCCTCGTTCAGTTTTTCTGTCACTCTGGAAGAAGGGAATTAAAAAGCTGTGAACTTCCCATTACTGCAGCTGCAACAGTGGATTCCCGATGGCTGCTGGGTTAAAGGAGCATCTGATTGGTTTCTCACTTCAGCATTTCACACTGCAGGGCATATTCTCTTACTTGCACTAATCTCATTAAAAAATATTTTCCCTCTCTAAATATTTTGAAAGGAAAGTCAGTTTTGTTCCCCTTTTCCTTTTCTCTCCATGAGGCAACTTCTGGAACAGGAGAATGTGAGCCTTGATTCACAGGATGCTGCTTTCTGGCCAGCTGCCCACCTCTCCCTCTGCCCCTCGGATTTCGTTTTCCTACAGTGTTCCCCGCCTCGATGGACATTCGGGTCATGTCATTCTGCTCTGATTATGCCCACTTTTGTGCACACGTTTGAGTACAGGGCTGGGTGGGACTTGAAGAGGAGTCTTGGTGTGAGTCCCTGCCCATCTCGGGAGAAGGAGTGACTTGGAATCCAGCAGGCACCCCACTACCTGCCAAGTCTAGTGGGAGACTGGCTGGCCTGTGGATTTGGGGCTTAAAAGTCCAAAGGCCACCGAGTGACTAGGTAAATCGCTGGGTTTTCTTCCGGCTTCAGAAAAAGCTGCGGGCCAGGTCGGCCCACTTGCATCCACTAGATGGCGCCAAAGCCG TCONS_00066968 . 3' 12056 TCONS_00066968 . 3' 12767 EMBV3_31940 TCCACAGGATACAATAGCAGGGACCTATAAAGGAGAATTCGGAGCAGGCAATGGCAACCC Gene BVT0102_205579 + 1 EMBV3_41043 GK000013.2:38554842-38575816 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30148 GAATCCAGTTAGAGACAGATCAGAGCAGGGCTGCCAGGAAGTTATGCAGGTTGGGCCTAA Gene BVV0102_318504 + 0 NULL GK000011.2:49294461-49298516 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025029 TCONS_00025031 TCONS_00025032 TCONS_00025030 TCONS_00025027 TCONS_00025028 1 XLOC_014643 Coding TCONS_00025028 XLOC_014643 Coding Coding GGCX 11:49282708-49298390 j TSS18251 6162 1 TCONS_00025028_5 530 0.157903278156443 14 0.607933167527581 1.9550813469746e-10 2.60583310699191e-10 3.18250025280176e-10 7.53875439916817e-05 2.35475487807178e-10 3.22442065103717e-09 0.000250740491379058 1.08878459618824e-10 4.82610790451876e-05 0.000114776798505262 2.01915086781205e-12 1.14351724414638e-13 1.80891043766868e-11 5.09059405986785e-09 2.12705249113725e-11 0.00208049109507234 0.00141432816557276 0.00126716955684075 1.0529043494465e-10 1.8964377409808e-16 9.77561689312991e-11 0.00200370982258416 0.000116929338226351 0.00100698683740921 5.64060757984884e-11 2.72400650554395e-11 6.47845622724885e-11 4.63993987513296e-06 0.000118082145615751 0.000148405399552669 NM_174066.2 GGCX Bos taurus gamma-glutamyl carboxylase (GGCX), mRNA. 0.0 3047 99.94 0.274423888347939 NM_000821.5 GGCX Homo sapiens gamma-glutamyl carboxylase (GGCX), transcript variant 0.0 2228 85.64 0.312885426809477 TCONS_00025028_5 sp|Q07175|VKGC_BOVIN VKGC_BOVIN Vitamin K-dependent gamma-carboxylase; 0.0 1095 100.00 0.99811320754717 1 coding 1 1 1 1 0.0408373040594072 0.735045215892428 -0.00613407491345092 0.900737840631306 CCATGGCGGTCTCCGCTCGGCCCGCGCGGGCCCCGCGGGGCTCAGACAAAGTAAAGAAAGACAAGGCTGCACAGACTTCAGGGCCCCGTCAGGGCAGCCGAATGGGGAAACTGTTGGGTTTTGAGTGGACAGATGTGTCCAGCTGGGAGAGGCTGGTGACCCTGCTGAATAGACCCACGGATCCTGCAGGCCTGGCAGTCTTCCGTTTTCTCTTCGGGCTGATGATGGTGCTGGACATACCCCAGGAGCGTGGTCTCAGCTCCCTAGACCGAAGATACCTGGATGGCCTGGAGGTGTGTCGCTTCCCCTTACTGGACGCCCTGCAGCCACTGCCACTTGACTGGATGTATCTGATCTACACCATCATGTTTCTGGGGGCACTGGGCATGATGCTGGGCCTGTGCTACCGGATAAGCTGTGTGTTATTCCTGCTGCCATACTGGTATGTGTTTCTCCTGGACAAGACGTCGTGGAACAACCACTCCTATCTGTATGGCTTGTTGGCCTTTCAGCTGACATTTGTGGATGCACACCACTACTGATCTTCATCGTGTACTTCATTGCGGGCATAAAGAAGCTGGACGCAGACTGGGTGGAAGGCTACTCTATGGAATACCTGTCACGGCACTGGCTCTTCAGCCCTTTCAAACTTGTGTTGTCCGAGGAGATGACGAGTCTGCTGGTGGTGCACTGGTGCGGACTGCTGCTCGACCTCTCAGCCGGTTTCCTGCTCTTCTTTGATGCCTCAAGACCCATCGGCTTCGTCTTCGTGTCCTACTTCCACTGCATGAATTCCCAGCTTTTCAGCATTGGCATGTTCCCCTACGTCATGCTGGCCAGCAGCCCTCTCTTCTGCTCTCCTGAATGGCCTCGGAAGCTGGTAGCTCACTGCCCGAAAAAGCTGCAAGAGCTGCTGCCCCTCAGGACTGCCCCTCAGCCCAGCACTTCCTGTATGTATAAGAGGAGCCGGGCCAGAGGCAGTCAGAAGCCAGGGCTGCGCCACAAGCTGAGCACTGCCTTCACCCTGCTCTACCTCCTGGAGCAGCTCTTCTTGCCTTATTCCCACTTCCTCACCCAGGGGTACAACAACTGGACCAACGGGCTATACGGCTACTCTTGGGACATGATGGTGCACTCCCGCTCCCACCAGCACGTGAAGATCACCTACCGTGATGGCCGCACCGGTGAACTGGGCTACCTCAACCCTGGGGTATTCACACAGAGCCGGCGTTGGAAGGACCATGCAGACATGCTGAAGCAATATGCCACTTGCCTGAGCCGCCTGCTGCCCAAGTACAATGTCACTGAGCCCCAGATCTACTTTGATATTTGGGTCTCCATCAATGACCGCTTCCAGCAGAGGATTTTTGACCCTCGTGTGGACATCGTGCAGGCTGCCTGGTCGCCCTTCCAGCGTACACCTTGGCTGCAGCCACTGCTGATGGACCTGTCTCCCTGGAGAACTAAACTACAGGAGATCAAGAGCAGCCTGGACAACCACACCGAAGTGGTCTTCATTGCAGATTTCCCTGGGCTGCACCTGGAGAACTTCGTGAGTGAAGACCTGGGCAACACTAGCATCCAGCTGCTGCAGGGGGAGGTGACCGTGGAGCTGGTGGCAGAACAGAAGAACCAGACTCTTCAGGAGGGAGAAAAAATGCAGTTGCCGGCTGGTGAGTACCATAAGGTGTACACAGTGTCGTCCAGTCCTTCCTGCTACATGTACATCTACGTCAACACTACAGAGGTTGCACTCGAGCAAGACCTGGCGTATCTTCAAGAATTGAAGGAGAAGGTGGAGAATGGAAGTGAAACAGGGCCTCTGCCTCCAGAGCTGCAACCTCTGCTCGAAGGGGAAGTCAAAGGCGGCCCTGAGCCAACACCACTGGTCCAGACCTTCCTTAGACGCCAGCAAAGGCTCCAGGAGATTGAACGCCGGCGAAATGCCCCTTTCCACGAGCGACTTGTCCGCTTCTTGCTGCGAAAGCTCTTTATCTTTCGCCGCAGCTTTCTCATGACTTGTATCTCACTTCGAAATCTGGCATTTGGCCGCCCTTCCCTGGAGCAGCTGGCCCAAGAAGTGACTTATGCCAACTTGCGACCCTTTGAGCCAGCGGGAGAGCCGAGTCCTGTAAACACAGATTCTTCTAATCCTAACCCTCCTGAGCCGGATTCTCACCCTGTCCACTCAGAGTTCTGAGGGAGGCCAGATGTGGAGTACAAATGTGGCAGCAGCCAGTCATAGGACCATTACATAGGCAGTGGACATGTGAAAAAAACTACTTCAGATTTTTTGTTTTTCCTCCATATCCTAGCTATAATAAATTCAGAGAGGATAGATTAGAGGGACCAAGGAAATAAAGCAAGGATAAGATTTATCAATTCCAAGGTTGAGGGGCTTGGGCAGTGGGGTTAAAAAACAATGTGAAAATGTCTTTCAAGGGGTAAGAATCAGGTTTAAAGTGACTTGCTCCTTGCCAAAAGAGAGTTAATGTTCCATGAAAATAACAGCTGCTGTTAAGTGCTTGCCCTATACAGGCACTGTGTGAAGCCCTGTGCCAGCGTTATTACACTTATTCCTTAAGAGCCATAAGCCTTATTTTGTGGTTGGGGAAGCTGAGGCTGAGGGGTAGTATAATTTGCTCAAAGACATATGCCTAATAAGAGATGGACTGACTGATGGTCTGAACCTCAAGTCTGTTTGGCTTAAGGTCTTGCACACTGCCTCTTAAAATTTTCAGAATCACTGACAGTAATTCTGAAATAACATAGCTTAAAACTTGTCTGATTATAAAGTGTGATTAGGATGGTGATCAGGTTTTAGATGCAGGGTAATTTTCTCTTCACTGCAATTTTGATTCTTTTTTTGTTCCTATTATTTATACAGTCAGTTTTTCACTAGGGGTTATGAGCATAGAATAGCAGAGAGTTAAACTGATAACAGAATTTAGATGATTAATAGTGATACACATCTAAAAAACAAGCTTAGTATTTAGCATTATTCTAGTTTTCAATGAGCACGAGGTGATATAAAGTGAGATTTAACCAAATGTAATGAAATCAGGGGATGTTTACAGTCATGATGTATAAGATTTGGATGTGATTCAGGAAGATCCTAAATTCTGTGAAAATTCAAAGGCCTGGCACTGGCCTAGGAAGTGAGAATGCATAATTAGCAACAGAAACAAACAAAAAACAGGCCCTGTTTGGGAACCCTATTGGGAACCCTGTGTGGAGGCAGAGACCGGTGGCAGCAGGCTGGCAGTCCCAGTTACTTTGATAAAGGATTGCATGTGTTTTCAGCCTTCTTTTCCCATGCTCCACTCCATCCAATCTCAGGGTTCTTTCCGAGGCGGCTGCTTTTCACCATACACACTTGGGTTGATTATGTCCACTCCATGGTTTTCAAGGATGCCGCTGCTTAGATTTCTTTCCTGTGCTCTAGAACTTTATCTAGCTCCACCTGGCTATCCCAGAGTTTTTAACTGTCATAAACGGAAGATGCATTCATCCACAACTGCTTATTACCGAATGGCAGCTGTTTTTTGATTCTTCCATTTTCCTTCCATTTCTTAAGATTTCAAGGCCCATCAGTTCTACCTCTTACTTTTTGGACCTGTTGAACTCATCTCTCCTACCTCTGTCCTTTCAGCCTTTATACTGGAATCCAGTTAGAGACAGATCAGAGCAGGGCTGCCAGGAAGTTATGCAGGTTGGGCCTAAGTGCACTCAACTGATCCAAGTGGAGCCTGGCAGTAAGTGCCTGTGATTCACACAAGGCATTTTGTGGGTTAGAGATAGCTACGGCACAGGGCACGTTGCTAAGAACCATGCGTGGGAAACACTGGTTTTCAGTCCTTTTGCAGATACCCTCAATGACACAATATACCTTGGCACTGTGTCCTTTCCCATAACTGCTGCCCCACCCTTTTTACTTGGTGAAAATAATAAAAGTAGTTCATTTTGGAAGGGAACTCTTCCAGTATTTTTCTTGATACAGGCAAGGATGTTACTTTCCCCCAACTGTTAGTGTACCACCTGTCTCATTTTCCAAGTGACAATGTTGTGGGTACCTAATACTGTTCAGAAAAGCTGTTCACTGGAGGAAATCTGGGTTCTCCAGGTTTCAGTATTCAGACCCTGGTAATCAATGTTTGTTTAGCCAGAAGGCTTTGCTTCCTACCATAGGCCAGCATTTAGGTCTTTTGTCCCTGACCAGTGTCATCGCCAGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTGGCTAAGAGTCGGACATGCATGCATTGGAGGAAATGGCAACCCATTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTCAGACACGACTGAAGTGACACAGCAGCAGCAGCAGTGTCATCCCCCTTGAAACTGTAGAAAAGTATGATTTTCAACTTAAACGTGACATGTTTCACATTCCCTTTCATTAGCACTTTATGCTTTTGATTCTCAAGCTGTAACCATCACAGTTTCATGCCTTTGCACCTACTAGCCTCCCTAGGCTTGTTAATCCCCAACCTCTACCCCAGGTCTAGGCAGAGGACAAGCCACCTTTGTCACTCTCCTCAGTCTGCAAGCTCCTTGACAACAGGTGTCATCCTAGTAAATGCTGAACCAAACCTCAAGGCCATTATTTCTCTGGTGCTGCTTCACCAGCCTACAGATGCTTCATCCTCACAGTCATTATTTGACCATGGTTCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGATAGCGTATCAAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCACGTATGGATGTGAGGTGGAATGTGAAGAAAGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAATCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTAAAGATCAGTCCTGGGTGTTCTTTAGGACTGATGCTAAAGCTGAAAACTCCAATACTTTGGCCACCTCATGTGAAGTTGACTCATTGGAAGACTGATGCTGGGAGGGATTCAGGGCAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCCCTGACTCGATGGACTCGAGTTTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCATGCTGCAATTCATAGGGTGGCAGTCAGACACGACCGAGCAACTGAACTGAGACAACAGTGTCTTGGCCATCTGAAAGCTTTTTGGTATTTTGGAGCTTTTTAATGTCATGAAAAGTTGAAGTTCTGAAGTTTCACAGCAGGTCAAGAGTTTATACTCCCCTAAGATTTAACCTTGCCTTTCCCCCCAAACTGGTTTCTATACTTTTAACCCTCCAAGCATACAGATATAAGCAGGCACTGCTTGGGCCTCATTTGCAAGAGCAAAGCATTTCAACCATTTGATTTCATATTTGCTGGTGTAAACATGGGCCATGTAGCTCAAGAAAGGATGATTCAAGAGCTGGTTGATAACTGCCACAAATTCAGAATACACATCCTCATTGTGGTTTTGGTTTTAAACTTTAGTTTATCCATTATATAATGGATCCTCACTGGTCCTTCACTACTGTTTAAAAACACTTTTCAAACTGCAGTAATTTGTAGCCTTTAACCCATTTATACAGAAGACAAATTTAAGGCATTAAATTGCTTTTGTTTTCAAAACAATGAAAATTGGTTTAAAATGTAAAGTATCACTCTTCTCACATGATACTCATTTTTAATTGTTCTTTTGCCTTTAAAGCACTGCTGATAGTGCAGAAATGGCTGTTGTAATAAGACGTGAATTTTGCCCACTGTGTTGGCCAAAAAAGGCAGTGCTGGACAAAACTTGAACTTTCATAAACCGTATCCCTGACACTAAGAACCTTTTAGAGGCCTATAGTTGAAGTGATTTCCCTAAACCATGGGTGGGATTACAATTACTCAGGGTTAAAATATGTTTCATTCATACTCATACTGAAACACTCAAG EMBV3_25857 TCAGCACCTGGAAACATCTGCCTTCTTAAATGCCTTGCATCCTGGAGAGAGTGAGCGTGA Gene GeneID:617091|ENC1:NM_001078067:172_cdna UTR3_Alt 2 NULL GeneID:617091 20 GENE ENC1 MGC139340 ectodermal-neural cortex (with BTB-like domain) EMBV3_12566 CCTGCACCAGTTCGAGTTCCTCTTTCTTGCCTCTGGAGCATGTTAGGGTTAGGGGTTTCC Gene GeneID:514807|HABP4:NM_001081523:8_cdna UTR3_Alt 2 NULL GeneID:514807 8 GENE HABP4 MGC143277 hyaluronan binding protein 4 EMBV3_08027 GGGACCCTGAAAAAGAAGACATGCAGAAAGGTCTCCGAGGGAGGCTTGTGAAGACAGGAA Gene BVV0101_004231 + 0 NULL GK000023.2:19537522-19776640 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39922 CTGGTTTTCCTGTTCCTGTCATTCCTCACCCAAGCTCTGTTTCCCCCTGCATAAGAAGGA Gene BVT0102_261138 - 1 EMBV3_25119 GK000022.2:6885302-6894654 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125849 TCONS_00125852 TCONS_00125848 TCONS_00125850 TCONS_00125851 1 XLOC_077320 Coding TCONS_00125850 XLOC_077320 Coding Coding CMTM8 22:6842020-6889192 j TSS94562 4503 3 TCONS_00125850_1 100 0.280257606040417 4 0.904623603485192 4.24600081190995e-05 0.000348104072885733 9.60123097052233e-05 0.00013581789851444 3.55536992746e-05 1.69092251855145e-05 0.000142153722004661 4.54259062518798e-05 6.39145676117347e-05 6.92341029616488e-06 2.56699016247763e-10 1.32705298629808e-16 2.90485254664681e-06 0.000224815806385134 2.07094316322116e-09 0.00034640656715972 9.08576213678997e-05 0.00025200938026233 1.13713801905005e-06 2.59338089259418e-09 8.28702046169858e-09 0.000575123313217771 3.03853314541333e-09 0.000127312547314462 0.000210947334507951 0.00066940097399353 0.000291392077170756 5.73303531103893e-05 1.33083916533223e-07 1.7647071164202e-09 NM_001046358.1 CMTM8 Bos taurus CKLF-like MARVEL transmembrane domain containing 8 (CMTM8), mRNA. 0.0 1023 100.00 0.125693981789918 NM_178868.3 CMTM8 Homo sapiens CKLF-like MARVEL transmembrane domain containing 8 (CMTM8), mRNA. 0.0 827 84.51 0.16055962691539 TCONS_00125850_1 sp|Q1RMP9|CKLF8_BOVIN CKLF8_BOVIN CKLF-like MARVEL transmembrane domain-containing protein 8; 1e-66 202 100.00 0.99 1 noncoding 0 0 0 0 -1.52091172706883 0.0128836806568095 -0.362185458852533 0.0117634129456072 CAGCAGGCTGTGAACAGGAACTTCCTTTGAGTTGGCGTTTACAGGGTTCTGGGACTGCTGGTGTGGACACTCATCGCTGGAACGGAGTACTTCCGGGTCCCTGCCTTTGGCTGGGTCATGTTCGTAGCTGTGTTTTACTGGGTCCTCACCGTCTTCTTCCTCATCATCTACCTAACGATGACCTACACCAGGATCCCCCAGGTGCCCTGGACCACGGTGGGTCTGTGGTTTAACGGCAGCGCCTTCGCCTTATACCTCTCAGCTGCTATTGTGGACGCATCTTCCGTCTCCCCGGAGAGAGACAGTCACAACTTCAACAGCTGGGCGGCTTCGTCGTTCTTTGCCTTCCTGGTCACCATCTGCTACGCTGGAAACACATATTTCAGTTTTATAGCTTGGAGATCCAGGACCATACAGTGATTCACCATTTTGAAAATTAAAAGGGGGAAAACAAAAGGAAGACTCACTGTAAAACAAACAAACAAAAAACAAACCTGTAGGTATAATGTATATTTCCAGAGATTTGTATTTAACTAATGTTTTTATATACTTAGTTAAATTTGCTCACACTGGTTTGTTACAATTAAACTGGATACTTATTTGCTGTAGCTTCTAATGAACTCTTAACTATCTTGTTGCTGTCTTCATAGACCTTATTTTCTTAGGCAATGTAGAAAGAGATGAACTGCTGATAGGAAGAATGCATCAGCTTTATAAACCAAACTTTTAAAAATGCTAGATTCTTTTTTGATTAAATGTTGCAGAATCCAGGGTAACAAGGTGTCTCATTCAAGAAAGGAGACCTTGGCAGCAGTCTCTCAGAGCTATCTTAGATGCTGCCTCCCAGGCTGCAGTCCTCATTTTGCCCCAAATAAAACTTAACTCACAACTCAAAAAAAAAAAAAAAAAAGGAGACCTTTTGCTGAAGCCTGAGGCTGGGGGCTGCAGGGAGTTCTTCGCCCTCACAGGGCTGCCCAGGGTTGATACTGCTGGGAGACACTGTCCACAGGCCAGTGTGTCAGAGCGATCCATCTCCCCAAGCCTGGGGGTCATTGGCAGCCATGATTCTCACACGCTGACTGGTTGGCACCAAAAGCATCTAATGGCCACTAACCTTGGAGCTTAGTAATGAGCTCCCCTTAAGTGATGCTCTGAGCACAGTGGCGGATGCGCTGGTGGGTGGTTTTTCTAACACTGATCAAAATAAACTCATAACCATTAAAAGAATAAATACTTGGGTGTACCTTAAAACCATCCTGCTGACCCCAGAGACAGAGTACCACATTGAGTAGAACATGTGTGACCCAAAGGCCCCAAATCTCTGGGCTCCAGCCTGAATAGTTGGTAACATTGTTATCAGCTCTTAGGAGACAGTAGGAAGCTGCCCGTTTGGGAGGCAGATGTGCACTCAGAGGAAGTGTTCTCGAGCAGGATGGCTCTTGCTGGCACGGCAGTGTATCTTGGGTGATTTTTCAAACTGAGCCTCTTTTGAAAAACAAAAAACCACAGAAATGTTAGTGTAGTTGGTGACAGGAGCAGGTTCAGTTGAACACTGTGGACGCGGCCCCGTGGCCCCCGCCGTTCTGCTCGTGGCGGTGCCGTTTCTTTCTCCTGTGGGTTGTTTGTGCTGGTTTTCCTGTTCCTGTCATTCCTCACCCAAGCTCTGTTTCCCCCTGTATAAGAAGGAAAGAGTTGGGATTTCTCGAGTGTCTAATGACACCCACCCCAGACCTTTGAAAGTAACAGTGAAGAATGTTCTTGGCTTGTGGGTCCAAAGTGGTTTCGGGGAGGGGACAGCAGGAGGGAGGGAAGTGTGGGGCACGGGAAGCCTGTCTGAGTCCCACCTGTAGTCTCGATGCTTCGGCTTCTGCAGCTCACACCTGCAGCTGCCTGGGGCTGCCCACGATCTTTCTGGAGTTTTGTTCCCAGGCATCGCCCGGACAGCCTGCGACTTGCTGGTTTTGCAAGAAAAGCTGAAATAACTAGTCAGGGTGTGTGCACACCACCTCTCTGCCCATCTTTCCCTCTCACACTCGCAGAAGCCTATTCACCTTCCACATACCTTCCGTGTATCGATTTTTCTTAAATTGAAATACAGCGGGTTTACAGTGTTGTGTTTTAAGTGCACAGCAAGTGATACACTTTAACATATATGTAAGCATATATATTCTTTTTTTACATTATCTCACATTATCGGGTGGGTTTTTAAGTACTTTGTATTGCAGTTAAGCCTCCATGAAAGGCAGAAAAACTGTAACCTAAGAGGTCTGTTTCTGGAAACAGTCGTGAGGAAGAAGCCTGTTTTTATGTTCTGTGTTTGTGTGTGTGTGTGTGATTTCTACAACCATGGCCACATTTATAGGAAGTAACTTCTGGGGTAAAAGGTTTCGTTAGCCAACTTGAAATAGCCTCCAAATAGACTACAACCAACTGTGGCCCTTTCCTAAACTGGGAGCACCAAAGGGATCAGTTTCAAGGGATCTATTTCAAGAGATCAGTGTTTCATTTGTGTCCACGTAGGGTGTGGGGGACTTGCCTTCACGTCTCTATGTGTGGCTTTTCAAGAGCATGACCCCTTAGTGTTGCCTTGAAAGTTCACCTCCCCAAAACCACCCAAAAAACAAAAAGCATTTATTTTTAGCTGAAAGGAAGTTCTTATTTCTTCTTTTGAATGCTGACTTTGTTCGTTAATAATTTTTAAGTGTGAATTTTTAGACAACAAAATGATTCTCTGCTGAAGCTGTAAGTTTTGAGCTGGGTTTAATTTTTTTCTGGAAAAAGAAGGAAAAAAAAAAAGCAAAGCCACATGCAACACAGCCTGCATAACAAGAAGAGTAGTTTTCTGGGGATGAAAAATATTATTCCAAGTATAATAGAATGTGCTTACACTCTGGCGTCTTAGCCCTTCCAGCACCATCACGTTCATAGAACTGAGGGCGGCGGGTTTCATGTGATGTGTTTACCCACTCATGACAAATCAATGGAATGCTCTAGGCGTTTAATTTCTCTCTATGGCTATTTCCGGCTCTTAGCCCCACAAGGTAAATGTTTAGCCAGTATTTTAAAACTGTAAGAAAATCTAGAGGCAAGAACGTTCGGCATCAGTTACTTTTGTCCATTTTTAAATTCTCCCTTCATAGGAGACTCCCCACCGGGTATCAGGGCACAAGCATGTTAAATACACAAGCTGTCTCTGCATAGAGCACAGACATTTAATAATACTAACTGAAGATGCAGCCCTGGGTAGGAAATCAATTTAAAAGTCTGAATTTCTGTTCCCTAGACAGTTCTTAAATTGATAAGAGATTTTCACAGGAAAAAAAAACAATCCAGGCACACGTTATTTTATTGCCCTTCACTTTACTGCACTTCAGAGATACTGTGTTTTATACAAACTGAAGGTTTGAGGCAGCCCTATGTGGACCCAGTCCATTTTTCCAGTAGCATTTCCTCACTTCGTATCTGTGTCACATTTTGGTAATTCTCCCAGTATTTCAAACTTTCTCATTATTATGTTTCTTACAGTGATCTGTGATCTGTAATGTTACTATTTGTTTCCAGGCACCACCAACCATGCCCATATAAGATGATGAATTTAATCCATAAATGTGTGTGTTCTGACTGCTCATTCCCCATCTCTCTCCCTCTCCATAGGCCTCCCTGTTCCCTCAGACAACAGTATTGAGATCAGGCCAGTTAATAACCCTGTAACGGCCTCTTAAGTGTTCACGTGAAAGGAAGAGTTACACGTATCTCAGTTTAAATCAAAAGCTAGAAATGATTAAACTTAATGAGGAAGGCATGTCGAAAGCCCAGACAGGCTGAAAGCTCAGCCTCTTGTGCCAAACAGCCAAGTTGCAAATGCAAAGGAAAGGGTCCTGAAGGAAATTAAAAGTGCTACTCCAGTGAACACAAGAATGGTAAGAAAGGGAAACAGCCTAATTGCTGATATGTAAGTTTAGGGGTCTGTGTAGAAAGAAGATTCAAACAGCCACTTTTCTTGAAGCAGAAAAAAAAAAAGCCTAATCCAGAGCTAGGTCCTAACTCTTTTTAATTCTAGGAAGGCTGAGAGAGATGAGGAAGCTGCAGAGGAAAAGTCTGAAGCCAACAGAGGTTGGTTCATGAGGTTTAAAGAAAGAAGCTGTCTCTTTAAAGGTGGAGGTGAAACAGCGAGTGCTGATGCAGAAGCTGTAGCAAGTTGTGCAGAAGATCTAGATAATTCATAAAAGTGGCTACTCTAAATAACAGATTTTCAGTGTAGACAAATGAGGCTCCTATTGGAAGAAGATGCCATCTAGAGCTTTCAGAGCTGGAGAGGAGAAGTCAGTGCCTGGCTTCAAAGCTTCAAGGGACAGGTTGACTCTGTCGTTCGGGGTGAAACACAGCTGGTCATTTTAAGTTTAGTGTTCATTTACCATTCTGAAACTCCTAGGGACCTTAAAGTGAAAGTGTTAGTCGCTCAGTCGTGTCTGACTCTGCGATCCCATGGACTGTAGCTCATCA EMBV3_29285 AGCCAATAGACTCCCTCTCTTGCTACATTTCATGGACCTGGGGGTTTCCCAGCAGAGGAT Gene GeneID:521961|VAV3:XM_002686162:308_cdna Constitutive 0 NULL GeneID:521961 3 GENE VAV3 NULL vav 3 guanine nucleotide exchange factor EMBV3_35140 AGTGCTCTTGTGTCCCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCGCCTCAAT Gene GeneID:791034|MIR192:NR_031349:152_cdna Constitutive 0 NULL GeneID:791034 29 GENE MIR192 MIRN192 bta-mir-192 microRNA mir-192 EMBV3_18059 AGGAAGTCCTGGGGCTTTCCCCTGCCTCCTTCGTGGATTCTGTTATGTAATATAAGCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02402 CGCCGAGATTCTAGAGCTGGCAGGCAATGCGGCCCGGGACAACAAGAAGACCCGTATTAT Gene GeneID:524808|LOC524808:XM_002697514:227_cdna Constitutive 0 NULL GeneID:524808 23 GENE LOC524808 NULL similar to histone, H2A EMBV3_10441 TTCAGGACCATGGAGACCCATCACTTTCTGCCTCTGTCACATTGGGTGTGCTGTTGAGCA Gene GeneID:513302|PCDHAC1:XM_002689223:71_cdna Constitutive 0 NULL GeneID:513302 7 GENE PCDHAC1 NULL protocadherin alpha subfamily C, 1 EMBV3_39223 AGCAGAAGTCACGGTAGTTACAAGCCAAGAGAAATAAGGAAACGGCCACGGCGCAGTCCA Gene GeneID:534057|LOC534057:XR_083596:100_cdna Constitutive 0 NULL GeneID:534057 2 PSEUDO LOC534057 NULL similar to CBF1 interacting corepressor EMBV3_35939 CAATGATAAGTCCATCTTGCTGCCTCTCATCATCGGCCTGATCTTACTCGGCCTCCTCAC Gene GeneID:504960|CD68:NM_001045902:466_cdna Constitutive 0 NULL GeneID:504960 19 GENE CD68 MGC137375 CD68 molecule EMBV3_41301 GCCGTGGACCGGTTAGGAATTGGCTCCATAAATCGGAGGACGGCAGACTATTTGGTGTTT Gene BVT0102_390062 + 0 NULL GK000007.2:20678284-20683773 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43766 TGGGACACACGCAGGTTTGACCAGCCCACTAGCACAGGGACATAATGAGGGAAAATGTCT Gene BVT0101_034642 + 1 EMBV3_10203 GK000015.2:18265150-18282664 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16572 CAACTTAGGTCCCCGGGCAAGGAGGAAATACCACACACGAAACGCCAAGTCCTTTTCCTT Gene BVV0102_094457 + 0 NULL GK000022.2:16616579-16671995 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128092 TCONS_00128091 TCONS_00128093 1 XLOC_077826 Coding TCONS_00128093 XLOC_077826 Coding Coding TATDN2 22:16670614-16691159 = TSS95669 4269 1 TCONS_00128093_4 746 7 0.792542834890966 0.000467069402205712 0.000340845810759487 0.000269716866430413 7.76527073441497e-05 3.04055193917918e-05 5.57863667915449e-05 0.000133097555304481 0.000161943168843327 0.000150694438083515 0.000240471769912277 0 3.18980341273131e-05 0.000125869764515633 0.00078014239524553 3.43623518342987e-05 0.000308398813890261 0 0.000222955815511995 0.000538684219755436 0.000176297463970055 2.58138915254008e-05 0.000159917158602933 4.84452806016565e-135 7.03473994018536e-06 0.000355054030413922 0.000137429976664122 0.000718225033977694 1.72481539003121e-243 1.3493768598072e-166 4.47066645901292e-140 XM_588043.6 TATDN2 PREDICTED: Bos taurus TatD DNase domain containing 2 (TATDN2), 0.0 7618 100.00 0.989224642773483 NM_014760.3 TATDN2 Homo sapiens TatD DNase domain containing 2 (TATDN2), mRNA. 0.0 2628 73.73 0.989927383462169 TCONS_00128093_4 sp|Q93075|TATD2_HUMAN TATD2_HUMAN Putative deoxyribonuclease TATDN2; 0.0 1093 76.65 0.998659517426273 1 coding 0 0 0 0 -0.0668306203755833 0.688006400900431 -0.0316473397296648 0.495163599075199 ATGGCGTCGGAGCGGCGCAAGGTCAAGTACCACTGGAGCAGCACTTCGGATCGGAGTTCCCGCAAGCGCAGCTGCCTCCGGGAGCCCAGTGATGTGGCCCCCTCCAGCCGCCCAGCTCACAGCTCTGTGTCGCGTTCAGGAGGGGCCAGCAGCCCCAAGCGCCTGAAAGCCCAGAAAGAGGACGATGTGTCCTGGGGCTCATCCCGCCACAAAAGTTCCACCTCCTCCTCGCATTCCCGCCGCAGAAGTTCCACCTCCTCCTCCTCCTCCCATTCCTCTGGCCCAGGTGCGGGTGGGGCCGCCTGCAAACGAGGCCTGATTCCGAGCTCACAGGGGTTCCTTTCGTCAGGGGGATCCCCTCTGCGCTCTGTCAGACCTTCTCTAGAAGAAATGGCTTCTCTCGAGGAAGAAGCCTGCAGCCTTAAGGTTGATTCCAAAGATAGCCCTCGTAGCTCCGTGGATTCTGAATTGGCAGCGGAAGCGGAGGGTCAAAATGGTACAGTGGAGGAACCACACAAGGTCCAGAAAAGGCAGAGGGAGAGACTTCGAGACCAGGGCTCCGCCATGATCTACCTAAAGGCCATCCAGGGCATCCTGGGAAAGTCGATGCCAAAGAGGAAGGGAGAGGCGGCCCCACGGGCAAAACCCCACATCGCAGAGCACCCCCGCCGCGGAGAGGGACCAGCCGGGAGTGTCAGTGTGGCTGCTCCTCAGAAAGAGAAAGAGACCACCCCAGAGGTCAGAGCGGAGGAGGAGGACACTGTGCTGGAGAAGAGCAGCTTCTGTGACAGGAGGGTGGTGATAGACCCTCAGGAGAGCCCCAGCGAGGAGCCCCTGGGTGGCCGAAGGATGGTCACCGAAGAGTGCTCTCCACCCCTGGAGTTTCTGGATGACTCTGACTCGCATTTGAATGGCCAGAAGCCTAAGGACCGGGAGGTGGTGATGGAGCGCACCTCTTCAGGAAGTGACTGGTCTGACGTGGACGAGATTTCCACAGCCAGGTTCTCTCAGGAGGAGCCCGTCCCCCTAAAACCCTCCACAGTTCCAGAGGCTTCTGCCTTCCCCACGGACTACGTCATGTACCCAGCTCACTTGTACAGCAGTCCCTGGTGTGACTATGCCAGCTACTGGGCCAGCGGTCCCAAGACCCCCAGATACCCGTCCGTGGGCAGTGGCAGCAGCGACACGATGCAGGCGGGCAGGAGGTGCCGGGGCTCTTCCCCCACCTCGACGGTGAGCCCCTCGCTCACCTCCAGGGAGCCTGAGGCTGCCAAGGAAGGCAGATCCCGGAAGTCTCGTTCATCTCGTTTCTCCAGAAGCTCAGAGGGACACGTGAAGGAGAAAAGAACATTCCAGGAGGACGTGCTGCCCCGTCCTGCTGAGGAACCTGTGTCTAGTTCCCTGCCCAGGAGCCGTCGGGAGTCCAGGCTGGAGGGTTTCATCGACACCCACTGTCACTTGGACATGCTGTATTCCAAGCTGTCATTCAAAGGGACCTTCAGCAAGTTCAGGAAGATTTACAGCAGCTCCTTCCCTAAGGAGTTTCAGGGCTGCATCTCTGACTTCTGCGATCCTCGCACCCTGACTGATGGCCTCTGGGAGGACCTGTTGCAGGAGGATCTGGTGTGGGGTGCCTTTGGCTGTCACCCGCATTTTGCACGTTACTACAGTGAGAGTCAAGAAAGGAATCTTCTGCAGGCCTTGAGGCACCCCAAGGCTGTGGCATTCGGGGAGATGGGCTTGGATTATTCTCACAAGTGCACCACGCCTGTCCCAGAGCAGCACAAGGTGTTGGAGAGGCAGCTACAGCTGGCCGTGTCTCTGAGGAAGCCCTTGGTGATCCACTGCCGGGAAGCTGATGAAGATCTGCTGAAAATCATGAAAAAACTCGTGCCTCCAGACTACAAGATTCACAGGCACTGCTTCACCGGCAGCTACCCGGTCATCGAGCCCCTGCTGGACCACTTTCCCAACATGTCCGTGGGCTTCACAGCCGTCTTGACCTACTCCTCCGCCTGGGAGGCCCGGGAAGCTCTGAAACAGATCCCGCTGGAGAGGATCATCGTAGAGACGGATGCTCCCTATTTCCTGCCTCGACAGGTTCCCAAGAGCCTTTGCCAGTACGCCCACCCGGGCCTGGCCTTGCACACGGTTCGAGAGATCGCCAGGGTCAAAGACCTGCCGCTCGCCAGCACCTTGGCCACCCTGCGTGAGAACACCCGCCGCCTCTACAGTCTTTAAGCAGGGAGGGTGCCACCAGGAGTCTCCTAGGAAAGGATGACCAGCGGCCTGACAGGAGAAAGGCCGCGTGAGCTCTGCCTGTGGGTCCCCACTCGAGGATGTTGGAGAGCCAGCTGGGACAGAGGAAACCCGGACAGGGTGTTTCCTGAGACCTCCTCAGAGGCCTCTGCTTCAGGCTGGGGAGGGTGGGATGGGGTGCAGTGGGTGGGCGAGGGGCTTGGGCTGGCCTCCTGGCCGTGGTGCTCCAGGGTGACTTGGGCAGAAGGGGAGGGTGTAAGGGTGCAGCAAACTCACCTACTCCGAGCTTGTCTCTGTGGCTTAGGCGCAAGCAGTCTGTGTGTGAAGTCACACTGCTCCTCGTTTAGTGCGCGTGAGCCAGTGGTGTGGTTCCTGGTTCTCCACTCAAAACACAAATCCCGAGTGGGAAATCTCTGGGGGACGTTGGCCAGAGACCTGTCTTGGAGGCTGATGCTCCTGTGGCCGGTGAAGGAGCCCCTCGCTCCCCTGGATAACCTTCAGTCTGGCCCGCACTGTCGCCAGTGTCATTTCTGCGTCAGCACTGGCTGAAGGACCTCGGCTGCGGTCTCACTGGTTCCACTGCTGTTGACACAGAGAGGGCCGAGGGGCGTCCACTGTCCAGGGCAAGTTCTGGCTGAGGGAACCCTGGATTGACTGGAGGACCTGAGGAGGAAGCCTATTTGAGGACAAGGACCCCAGGGAAGGTGTTCTTCCCCCTCGGTTATGTTGAACTAACCGCTAACGGTCCAGTCTGCCGCAGAAACTGCTAGCCTGCCCTCGGGGCTCTGAGCCCCGCTGGCCTCCGCTTTGCCCCCTTCTGCAGCAGTGGACCAAAAATACTCCTTCTGTTCCATCTCTCGTAATGGCCCCTTGTGCGCCCCACCCAGGTCGAGAGGTAAACCAGTTTAATTCTCCAAAGCTCTGCTGGTGCCGCCCAGCCCTGTCCATTGCCTATGCAGAACAAGAGGCCTGGTGTCCATGAATCTCCCATTTCCCGGCCTGGGGCTCTCCCTCACCTTGGCCTCCACTGTGTTCTTTCTCCATGGTGGAAGTCAGAGCCCCTCCTCGGACTCTGAGCAGCCAGGCCGTCTCAAATTCTGAGCTGTGCTCTGTGCCCTGCTGGTGCCTTGTGAAAGTATGTTCCATACAGACCCTGGAAGGTTATGACAGTCAAAGGTTAAGAGTGAGGACGCTCTGGCACTTGGCACAAAAGGATCCTTACTTCCAGCTTCCTCAGTGAGACAGGCCACCCTGAGTCCTTTGTCTCTTGGAGACCAGGAGCCGAAACCGTAAGATCCATCACTCGCGCTGGACCCCTCTAGGTGTTTGTGGAAGGTGCTTTGGAACCTCGTGAGCTGCAAGGAAAAGGACTTGGCGTTTCGTGTGTGGTATTTCCTCCTTGCCCGGGGACCTAAGTTGCTGGACTGGGAAGTGGGCCTTGATTCACTGTCCACCTTCCATGGATCAGCTGTGCATCATCTGTGCCTCAGATCTGGGGAGTCCAGAGCCTTGTTCTCCTGCTTGGAAGATTTGGAGGACTAAGTGTTTCAGAGTGCTTCATTGTTCCCCAAATGAACTGCCGCTTAGCCGTCTCCTTCACGACAAGGCCTGGAAATCACGACACCAACGAGGGAAACCAGCCGGGCCCGCGTGCAATGATTAAAAGTGACAACTCAGTGGATGTCTCAGAGCCATCGCAGTCTCCCTGCCAAGGTGAAGCACCAGGTGCTATCTACTTTTATCTCCAGGATTAAGGATTTTCATTTCTGTTACACAGTGAAATGCGACCTGTGGCAGGCGGGATGGGGGGTGAAGGGGGGTGAAAGCCAGTTGGCACTGTGTTTCATTTACAGATTTTAGATGGCCAACTGGATTGTTTCTGCTGTGTTGCTGGCATGCCTCTGTATCTCTGCCCCCTCGTCCCCTTTGGCCATCTCTTTCTGAAAATAAAGTGATGGATCTTCAGCCCATGGTCTCCATGTGTGTTTGTATTTCTCAGTGTTAGCAGCG EMBV3_15440 AGCTCGTCAACTGGGCAGTAAGAAAGAAAAGACTTCTGGGAAAGATCCTGATGACTATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25747 AGGGACATTGAGCTTTCCTGATCTCTCATGTTAGGGAGACAGCCACCTGGATCCTGTGCT Gene GeneID:533129|ETV4:XR_084543:308_cdna Constitutive 0 NULL GeneID:533129 19 PSEUDO ETV4 NULL similar to ets variant gene 4 (E1A enhancer binding protein, E1AF) EMBV3_14484 TTCCAAGAAAAGGCGCAGATGGAGCTGCAGGACTACGTTCAGAAAACCTACTCGGAAGAC Gene GeneID:505531|NR2C2:XM_002697126:52_cdna Constitutive 1 NULL GeneID:505531 22 GENE NR2C2 NULL nuclear receptor subfamily 2, group C, member 2 EMBV3_10494 CGCTGTGCTCGAGAAACGGGGCTGGAATATGCATCCTTGTCAGATGCTCCAGGTGAATAA Gene GeneID:787318|LOC787318:XM_002690397:5_cdna Constitutive 0 NULL GeneID:787318 9 GENE LOC787318 NULL similar to dapper, antagonist of beta-catenin, homolog 2 (Xenopus laevis) EMBV3_26685 TGCTGAAAATCCCAGAGGTCTTGATATAAGATCCAAGGCTTTCCCATCAAGGGGGGACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06084 CAACGCCATAGGCCGGGGTGCCAAGTCAGTGCGTGAATTCCTGGAGAAGAATTATACTGA Gene GeneID:505050|PSMA7:NM_001034233:862_cdna Constitutive 1 NULL GeneID:505050 13 GENE PSMA7 MGC126929 proteasome (prosome, macropain) subunit, alpha type, 7 EMBV3_09921 GAGACAAAAACTAGAACGGCAGCAATAACCAAAGGGGTTAGTCGCTCAGTCGTGTCCAGC Gene BVT0102_214269 + 0 NULL GK000011.2:44188824-44205802 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39219 TTAAGCTATAATTCTCTCTTTTATATTTATGATATACCAAATCCTATGTTTTAGAAAGTT Gene GeneID:539846|LOC539846:NM_001098107:28_cdna Constitutive 0 NULL GeneID:539846 7 GENE LOC539846 MGC148427 transposon-derived Buster3 transposase-like EMBV3_41149 GGGCCTAAATCTCCAGGTGACATTAGAACTCAGGTATAGGACAGACTCTAAGCATCTTGG Gene BVV0102_106579 + 0 NULL GK000013.2:55566384-55591836 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043140 TCONS_00043141 1 XLOC_025862 NonCoding TCONS_00043141 XLOC_025862 NonCoding NonCoding - 13:55587632-55591767 - TSS31954 4135 6 TCONS_00043141_12 76 0.655139056831923 1 0 3.66497680532918e-05 5.58920477899964e-05 7.94599250069957e-05 2.2992003029001e-06 8.61005534453626e-05 1.79284084021083e-16 2.33970609509811e-13 0 1.42946944506764e-05 6.17978073427791e-05 9.96501740270741e-06 1.21062991981894e-05 2.56743654471969e-05 9.10083670179243e-06 3.55951530434765e-06 0.000753705097520009 8.03011766641793e-06 8.49509058778756e-05 2.89034662553672e-05 0 0 0.000174076054096483 0.000160798199823049 0.000168254593650647 6.70228348240064e-06 3.40772742039597e-06 1.62321108401185e-06 5.34266664652361e-05 2.93507019803199e-05 4.36196295069461e-06 XR_232880.1 LOC101906818 PREDICTED: Bos taurus uncharacterized LOC101906818 (LOC101906818), 0.0 1283 100.00 0.171704957678356 0 noncoding GACTCTTTTGTGACCCCATGGACTGTAGTCTGCCAGACTCCTCTATCCGGAGATTTGCCAGGCAAGAATGCAATACTGGAACGGGTTGCCATTTCTGTCTCCAGGGGGTCTTCCTGACTCAGGGATCGAACACTCATCTGCTGGGAAGCCCTCTCCTGAAGCTGCTCCTTAGATTTTTCTCTTTACACCTGGCTGCCAGCTGTTTCTGCTGTGCTTGTGCATGATTTTCTTTGATTCTATCTTAGTTGGGGAATTCTGGAATTCTTCAAGTATATAAATTTATGCCTTTCACCAAATGTAGAAAATTCTGGAAATTATTTCTTCAAATACTCTTTCTTGCCTTATCCTTTCCTCTGTTTTTGTGATTTTTGTTGCACAGATGTTGATATTTCGATACTGTTCAGTATTATAGAGATCCCTTATGCTCTTTTAATTTATTCCCCACTCCTTCTTTTTCAGATTGAATAAATTCTATTGATATACCTTCAAGTTTACTGATTTATTTCCCTCCATCATTCCACTTTTCTGTTTCGCTTATTCAGTTAACCGTACGTTTGTGTATGTGTGTGCTAAGTCACTTCAGTTGTGTTTGACTCTCTGTGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATGGAGTGGGTTGCCGTGCCCTCCTCCAGGGGATCTTCCCAACCCAAGGATGGAACCTGGGTGTCCCATTGCAAGCAGATTCTTTATCGTCTGAGCCACCAGGGAAGCCCAACTTTATGTTTAGAAAATTTTAACTTTCAGTTATAGAATTTCCTTTATAAAATATATTTTCCAGTCCTGTTTTGTGATTTTTATTTTTATTTTATTTAGTTTTGGCTTCACCATGTGGCATGTGGGATTCTAGTTCCTGACCAGGGATCGAGTCTGTGTCTCCTGCAGTGGAAACTCAAGAGTCTTAACCACTGGACCACCAGGGACGTCCCAAGTGTGTCGCTGAGTTAAAAAAAAAAATCTTTTCACTTGTTAAAGTATATTTTTCTTTACGTGAGTGATTATAATACTTTAAAATTTTATTTTGCTAATTCTGTTATCTGGGTCATATCATGGATCAATTGCCTATTTTTTTTTTTTTTTCAGGATGGCTTACATTCTCCTCTTTATTTTGTAATTTCAGATTGTGTCCTAGATATTGTGTTATTTTGTGTTGACACTGGATTCTCCTACACTAACTCAGAGTGTTGATTTTATTATTTCTGTGTTTGTGTTAGCACACAGCAGATGACTTGGTGGGACTGACAGCAAACACTTTCCCTTGGACAGCAGCTCAGATCTCATCTCAGTTCTTTCATTCTTAGCCAAGATGCTTAGAGTCTGTCCTATACCTGTGTTCTAATGTCACCTGGAGATTTAGGCCCAGATTATAAGTAGAATTGGGGTCTCCCCTTCTCTCACTCCTTCCTTTCTGGGATGCCCTCAAATACTTGCCACAGGGTGTCACTACCCCAACTCTATCTCCTGGCTCTCTGGCCAGCAGGCCTGGAGGTGTTTCCTTGGTGTTTATCTGTTGAAGCTGAAGCTCCAATATTTTGGCCACCTGATGGGAAGAGCTAGCTGACTTTTCAGAAAAGACCTTGATGCTGGGAAAGACTGAAGACAAAAGGTGAAGGGGGCAGCAGAGGATGGGATGGTTAGATAACATCACTGACTCAATGGACATGAATTTGAGCACATTCTGGGAGATAGAAGAGGACAGGGAAGCCTAGCGTGCTGCAGTCCATGGGGTCACAAAGAGTTGGACATGACCTAGTGACTGAACAACAATCTGCAGTTAGACTAGAAGCTGTGAAAACAGGCAGCTCACCCTGCCATTCTCTTCTCCTGAGTGTTAACTCCTCTCTAGCATCTGCCTGTGCTCATGACAGGGATTCCAGGTTAAGTGTTATTTTGTATTTTGTCCAGAGTTCATAGTGCTATGGGAGGTCAGTTCAGTAGTTTACATACTGGAAATGGAAGCCTAGCGTGTCCATTTCTGTGAAATGATTTTGCCTGGGATCTTAAAATCCATTTGTATGGAATCTAGATTATCCTGGGGAGAAATGACATTTTTACAATATTGAGTCTTTCAATTTTTGAACTTCGTATATCCCTCCATGTATTTATTTCTTCTGTAATTTCTCTCAATCATGTTTTACAATTTTTTGGTCTGTAGGTCTTGTGCCCTTCCTTCTTAGTTCTGTTATCAGGGTATTTGATGATGCTGTTTCAAGCTAACGATGCCTGCGACCACCAGAAGCTGGAAGAGGCAGGAGATTTCTTCCTCCATTCTCCAGACAGTGTGGCCCTGCTGACACATGGATTTTGGACTTCTGGTCTCTACAATTGTGAGAACAAATTTCTATTGTTTTAGGCCCTCAAGTTTGTGATAATGTTACAGCGGCCCTAAGAGATTCATGGAGCTGCATTTACAATCAGTTATGTGAAGAAGGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTGAAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATACTAAAGCTGAAACTCCAGTACTTTGGCCACCTGATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGAACTCCGGGAGTTCGTGATGGACAGGGAGGCCTGGCGTGCTACGATTCATGGGGTCGCAAAGTCAGACACGACTGAGCGACTGATCTGATCTGATGTGTTCCTGAGCTTGCCCCTGGATGTGGATCCATTCTTGACCAGAGCACAGCCCACTGAGGCTGTGTTGCTCGTTGGGACCAGGGCCTGGTCACCAGCTGCCACTTGGCTGTATGTCTTTTCTTTGTTTTATGGTGTGGTATTTCAGGTGGACAATAAAAGCATAGGTAATATAACAAATGCTGCACGTCTTTCACAAATCCAGGGCAACACTGAAATTAGACTTGTGGTTGTTTATTTTTATATTTAAGAGAGCATGTCTGATATTTTCTCTATTTTATTGAAAAGACAATATACTCCTTAATAAACCCGATAGTCCCACACAGCTGCCAGCCTGGGAGGTCTCCTTTTTGCTCATGGCCTTGGACGTTTGCACCGCTGTGGGTGGCAATGATATACTGTTTTGGGGTTCTGGCATTCTCACTTAACAGCAAACATTTTTCCATGTTTAAACCTGGTTTGTATATTGACACTCGTTTTCAGGCCCGTTTTTCTTTTCATGCTAGGTGGAATTTTTGTTTCAAACTACATAAGTCATACGGAAGCTTCTTGTGGTAACAAAACCACGCAGAGATATTCAAAGAAAATGCTCCAGTCCCCAGGGTGGCCAAGGTTAACAGTCTGGCAGCATCTCCCCGCCCTCCATAGGGAGGAGGGGAGGAGCCACGTGGCTACCGCCCCTCCCCCACTCTCCAGGGGGGCAGGTCTCTGCAGGGCGTCAGAGGCGTAAGAGCTGCCTAGGCCGTCGGTAGCCCCCACCTTCCCTTGGGGCGCAGAGACCCGGTCTGGAAGCGGAGTCGCGGCGGAGCGGGGTGGGCAGGGAAGACGGTGCACCGACGCTTCACCTCCCACTTCCTGCCGGACCGGAGGGCGCCCCGGAGGACGCTGGGGGTGATGTCAGCACCGCTGCGGCGAGGAGGCCTGGGCGGGGGAGGGGCCCCAGGGTTGGAGGGGTCCTGGCGGGCGGGCCTCTGTGGGAAAGCAGGAGGGGGCCGAGACGGTACCACCTGCTCCCTTCACTTTAGATCACAGTAACTACAGGGGCGGGCGAGAGGGACCCCACCTCTCCCGGGCCTCACCGTCTCGCGTCGGTCAGTGATTTGCCTCGTAGCACGGCTGTTACTCTTCTGTCCCGACTCCGATCTGGGTGTTCTGAGTGCAGACCACGGTGTACCTCTTTTTCCCACTACGGCACCCGGGGCCTGCTTTTGTTTGGCTCACTTAACATTTTCTGATGAGTTGTCAACATTAAAGATGAGATTTTACACAA TCONS_00043142 TCONS_00043143 s 5' 70 TCONS_00043142 TCONS_00043143 s 5' 4204 EMBV3_37547 CCTGGCAGTAGCCTTTGTGCTGAACCAGATGTCAGCAATCTGAAGGCGATCTTACAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17710 GATAAAGCTCATGGCCTACCAGCTAGAAAGTATCCTTGCCATGAAAAAGAGGACGTGATA Variant GeneID:509827|ATF2:XM_002685316:163_cdna 143^320 5 EMBV3_32176 GeneID:509827 2 GENE ATF2 CREB2 MGC142504 activating transcription factor 2 EMBV3_15292 CCACACACCTGTGGGCACCTTTTCTTGGACAACGGAGGCAAGAATATACAATGGAGAAAA Gene BVV0102_220608 + 0 NULL GK000007.2:15407334-15428920 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02040 TCCTGGCCCCACTGCCCTCATCTCACAAGTAACTCAGGAGTCTCACAAATACAGGAGACT Gene GeneID:100139162|LOC100139162:XM_002695823:191_cdna Constitutive 0 NULL GeneID:100139162 19 GENE LOC100139162 NULL hypothetical protein LOC100139162 EMBV3_16336 TGTTCCTGGGCTCCCATCACCATGAATGCTGTCCCTATCCACCTCAAGCTCCAGAGACAG Gene BVT0102_171277 + 0 NULL GK000002.2:129795564-129895412 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112631 1 XLOC_068526 NonCoding TCONS_00112631 XLOC_068526 NonCoding NonCoding - 2:129839229-129839943 - TSS84252 714 2 TCONS_00112631_2 37 0.180672268907563 1 0 0.000304889100524785 0.000429240065858943 6.48039948369341e-05 0 0 0 0 0 0 0 0.000118627069766582 0 0 0 0 0 0 0 5.02165924036082e-05 0 0 0 0 0 4.85188310653067e-05 0 0.000623662590975892 1.34526276624984e-05 0 8.42050887655166e-06 XR_230470.1 LOC101909455 PREDICTED: Bos taurus uncharacterized LOC101909455 (LOC101909455), 7e-109 398 100.00 0.30672268907563 0 noncoding 0 0 0 0 -0.330667590637813 0.0863730563836549 -0.093659415914897 0.208348246492063 GAAAGGACATGAAATGTGGCTGAAATGCAGGGCAGGAAGGAGGGAGGTTCAGATGAAGACAAGTTGGGCAGGGCTTCCAGTGCTTTCCTGCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCTGACTCTGTGAGACCCTATGGACAGCAGCCCACCAGGCTCCTCCATCCACAGGATTCTCTAGGCAAGGATACTGGAGTGGGTTGCCATTTCCTTCTCCACCAGTGCCTCCCTAGGGAGCTCAGACTCTATCCTGAGGTTGATGAGTGTATATGAAGGCTTTGCAACAGGGGAACGATGTAGTCAGGTGGGGGTTCTAGAAAGATCCCTGTGGTAGGTGTAGAGGATATTTAAAGGCAAGAAGAGGGAAGAGAGGACAGACTGAAGCCGTTGCCTTGAGTTGAAGGTGGCCTGAGCTAAGGCAATGGCAAGAGGGTGGGAGAAGGGACAGATGGGTGAAACCTTTCCAGAACAGAACAGCAGAATATTCAGTAGAATGATTTAAGGAGAGAAGGTAAAGATGACTGAATTTTCTGTCTCTGGAGCTTGAGGTGGATAGGGACAGCATTCATGGTGATGGGAGCCCAGGAACAGAGTAGAGTGAGGTCCTCTTCAAAGTACCCATTAGACATCCATTTCTTCAAGAGCTGTCTGTGCTGTACCTCCAGACGTGGGAGCAGATGAAGACCCAGCATCTTCCAGGGAAA TCONS_00106848 . 5' 43660 TCONS_00106848 . 5' 43660 EMBV3_07604 GAAAAACAGCCTCGGCAAGGATTACATTCTGGAACTGAAACTGAAGGAGGCTTCCCAGGG Gene GeneID:537351|ABCA6:XM_002696225:40_cdna Constitutive 0 NULL GeneID:537351 19 GENE ABCA6 NULL ATP-binding cassette, sub-family A (ABC1), member 6 EMBV3_41997 GTGAATCTCTTTGTGTGTTCTGGGCTATGGAGAACAATTAGGGAACTGATTACTGGCCGG Gene BVT0102_137441 + 0 NULL GK000030.2:44869988-44947383 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00021036 TCONS_00162455 TCONS_00219680 TCONS_00232350 4 XLOC_011710 XLOC_099336 XLOC_132999 XLOC_141835 NonCoding TCONS_00219680 XLOC_132999 NonCoding NonCoding - 7:23927258-23928925 - TSS163678 1667 2 TCONS_00219680_1 73 0.997600479904019 1 0 0.000432573933438646 0.000550544628998304 0.000577704761134305 0.000528065937718158 0.00114813690887213 0.000197414097015665 0.000104949801952048 0.000388046551507619 0.000629665071903876 4.68958848802276e-05 1.23591256211162e-05 2.1756248374637e-05 1.26223239930908e-05 0.000750701267147809 0.000122998186196972 0 0 0 0.00017529423333208 0.00033631090838196 0.00040180673176359 2.22575557747623e-06 0 0.000530494254162719 0.00079423150843562 0.000692612149154003 0.000362198085910791 2.88097716616831e-06 1.35901538159244e-05 9.01657114075221e-07 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 7e-88 329 89.37 0.151169766046791 0 noncoding GAATCCAGCCTCTACTCTAGATTTTTAATCCTTGCTTTTTGGTATTTGTTATCAATTTTGTACCTTTAATAACCCAATCTTCAATACCCATTTTTACGTGGGAGCAAGATCACTGGCTTGACTGCTCTCTCCCTCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTCTATCTCTTCCCTCCTCTTTCTCTTCTCTGCCCGACTCTGTGAATCTCTTTGTGTGTTCTGGACTGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCTCTTCTTTTCATTCCCCCCTTTATCCTCCTGACCACTTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCGTGAACATCTCTGAGCAGTCCAGACTGTGGAGAGCACATAAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCTCTTTTGATTCCCCCTCTTCTCCTCCTGGTCACCTATATCTCCCTCCTCCCTCTTCTCTTCTCCATGTAACTCTGTGAACCCCTCTGGGTGTCCCTCACTGTGGAGAAACTTTTCATCTTTAACTTAGATGTTTTATCATTGGTGCTGTATAGATGGAGAAGTCTTGAAGCTACTGTAAGAATATGAATGAAAACCAGAGGCAGGAGGCTAAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATTGATAGGAGCTCATCAAACGCCTCCATACCTACACTGAAACCAAGCACCACCCAAGGGCCAAGTTCCAGAGCAAGACATACCATACAAATTCTCCAGCAACGCAGAAACACAGCCCAGAGCTTCAATATACAGGCTGCCCAAAGTCACACCAAACTCACTGACATCTCATAACTCATTACTGGACACTTCACTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAATACTGACACAAGCTTCCCTAAGCAGGAAACCTTGACAAGCCACCCATCCAGCCTCTCCCACAGTGAGGAAACTCCACAATAAAGAGAACTCCTGGAAAGGCCTCCCCAAACACAGCAATATAAACAAGATGAAAAGGCAGAGGAATACCCAGCAGGTAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTATCTGATAAAGAATTCCAAATAATGATAGTGAAAATTATCCAAAATCTTGAAAACAAAATGGAGTTACAGATAAGTAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGCAAAATAAAAATGAGTTGATATATAATGAATAATGCAATAAATGAGATCAAAAACACTCTGGAGGGAACCAACAGTAGAATAATGGAGGCAGAAGATAGGATAAGTGAGGTAGAAGATACAATGGTAGAAATAAATGAAACAGAGAGTAAAAAAGAAAAACGAATTAAAATAAATGAGGACAACCTCAGAGACTCTCTGAGGCAATGTTAACAATCTCTGGGACAATGTTAAACACCCCAACATTCGAATCATAGGAGTCCTAGAAGAAGAAGACAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAATCACCCAAATCCAAGAAACCCAGAGAGACCCAAACAGGATAAACCCAAGGCGAAACAC TCONS_00212582 TCONS_00212583 TCONS_00212584 TCONS_00212585 TCONS_00212586 . 3' 10109 TCONS_00212582 TCONS_00212583 TCONS_00212584 TCONS_00212585 TCONS_00212586 . 3' 11775 EMBV3_31996 CAGCACCTGGAAGCTCTCTGAAGCCCTTCATTTAAGAAGCTGAGATGCACATGAGCCTGA Gene BVV0102_450622 + 1 EMBV3_31689 GK000018.2:35929503-35957654 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083003 1 XLOC_051160 NonCoding TCONS_00083003 XLOC_051160 NonCoding NonCoding - 18:35949240-35949810 - TSS62491 308 1 TCONS_00083003_1 36 0.516233766233766 2 0.462214411247803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000171503892726395 0 0 0 0 0 0 5.95717413282748e-05 0.00179621103481638 0 0 0 0 0 1.95202823114318e-05 XM_005223810.1 SLC17A4 PREDICTED: Bos taurus solute carrier family 17, member 4 (SLC17A4), 2e-10 69.8 73.68 0.418831168831169 0 noncoding 0 0 0 0 -0.0847400606392063 0.429523662373778 0.032048215344431 0.590335442837629 CAGAATGAGTGAAGACTGAACACGAGTCTCACAGCTGAGAAGGCCAAAGCCTGAGGAAGGTGGCTTGGAGACAAGTGGCGAGTGAAAAGCAGAGACAGGAAGCCAGCTGCAGCAACAGAGAGTCTCAGGCTCATGTGCATCTCAGCTTCTTAAATGAAGGGCTTCAGAGAGCTTCCAGGTGCTGGGCAGGTGATGTGCCCACAGAGGACATGGAAGCTCTGTGCCCCTTCCCCATACTTTGCTCCTTGGATCTCTTCTGTTTGACAGTTCCCAACTTGGAACCTTTATAATAAACCAATAATAGTAAG TCONS_00083002 s 3' 10290 TCONS_00083002 s 3' 10290 EMBV3_25064 CCTGCTGCTTTTCTTCCCTCTTCTATCGAAGTTAGAGTTATCACTTCAGGGAGCTTACAC Gene BVV0101_035791 + 0 NULL GK000007.2:56167819-56234771 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213712 1 XLOC_130522 NonCoding TCONS_00213712 XLOC_130522 NonCoding NonCoding NR3C1 7:56199415-56232062 x TSS160044 532 2 TCONS_00213712_1 40 3 0.983795870857073 0.000384151910225162 0.000646231440403035 0.000218710158180248 1.02995181162464e-175 0.00113262288954593 2.23118682556037e-150 4.95304572844508e-05 0.000169399120869481 0.000511631809568838 0 1.5827834199293e-66 3.00737099476729e-109 1.11934264052831e-05 4.66056980009989e-05 3.20285862864836e-308 2.87895696183221e-296 0 0 0.000148970895746011 0.00141745822240528 0.000473433794335769 0 0 0 2.88688427883924e-05 0.000120820306083861 0.000895628427733715 0 0 0 XR_231741.1 LOC101906236 PREDICTED: Bos taurus uncharacterized LOC101906236 (LOC101906236), 7e-171 603 100.00 0.62593984962406 NM_008173.3 Nr3c1 Mus musculus nuclear receptor subfamily 3, group C, member 1 (Nr3c1), mRNA. 2e-31 140 91.84 0.182330827067669 0 noncoding 0 0 0 0 -0.0795966072177886 0.689019321890689 -0.0311466026522741 0.631696626235949 GGTTGACAGGTGGGCAGGCCCAAGCCAGTTTGGGCCAATGATAAGTGAGTACAAACGTCAGTCTTTGTACTAATATAAAGTCTTCGGGAGGAAGCCCCACCTCTCCACCGCAGGTGAACTGATAAGCGCCATGTTGCAGCCCGAGGCAGAACCCATCTTGGCGGAAGGCATACCGTGTGGAGAGGAGAGTGAGGGAAGAAGCTGGTTTCAAGCCTCAGCATCTTCCTCTGTGAGGGGTGGAGGTCACATGTAGAGAGAAGAGTATTTATAGGGAAGTTTGTCGGCTCATCCAGTTTACGGATATGATTGGACACATTATGCTTTTGGAAATACCCAGTGTAAGCTCCCTGAAGTGATAACTCTAACTTCGATAGAAGAGGGAAGAAAAGCAGCAGGAAAAGTGAAACTGCATGAGTTCTACAAAAGCATGTTGGAGTCATATAATGAAAAAGCAGATTTTTTTTTTATTATGATGTTTCTCCATATTTGGCATTGCTGTAAATGGCTAACTAACATTTACTGCCAATTCAGT TCONS_00217232 r 5' 0 TCONS_00213693 TCONS_00213698 TCONS_00213699 TCONS_00213704 TCONS_00213711 s 3' 26967 EMBV3_06638 CAGAGCTACCACCCCTCTGGACCACACTGAACCTTCCCATCCATCATACGTTAAGTCCTA Gene BVV0102_405892 + 0 NULL GK000013.2:38385865-38519142 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17162 GAGTCATTGTCAGAACACAAACTGAATGGAGGAGATGGGGCCAGGTTCTAAACAACTTCC Gene BVT0101_010291 - 1 EMBV3_13609 GK000002.2:127720330-127773926 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27503 GGCAGCCCACCACCGTATATCAAACCTCACTTCCGAATGTAAAAGGTTCTCACGCCTTTG Gene GeneID:282420|CSNK2A2:NM_174636:60_cdna Constitutive 1 NULL GeneID:282420 18 GENE CSNK2A2 NULL casein kinase 2, alpha prime polypeptide EMBV3_12836 ACCCCCCAAGCCACCACAATACCCCAAAATGCCTATGCAAAAAAGTGTGGAAGCAGATCC Gene GeneID:525644|OPHN1:XM_002700049:12_cdna Constitutive 0 NULL GeneID:525644 X GENE OPHN1 NULL oligophrenin 1 EMBV3_13616 AGGAAAGCGAGTCTTTCTAACCAAGGGCTTGGGTGGGGTTCAAGGTATAAGGGCGAGTTT Gene GeneID:504653|LTBR:NM_001103228:14_cdna Constitutive 1 NULL GeneID:504653 5 GENE LTBR MGC152267 lymphotoxin beta receptor (TNFR superfamily, member 3) EMBV3_29830 CACCGTCCGGGGCAGGGGGAGAAGGTATTTTCGAGACAAAGCACAGGCACCACAAATAAA Gene GeneID:512431|PPP1R12C:XM_002695412:42_cdna Constitutive 0 NULL GeneID:512431 18 GENE PPP1R12C NULL protein phosphatase 1, regulatory (inhibitor) subunit 12C EMBV3_01513 CTTTGGTTTGAAAGATGTCAACATTCCAACAAGGCCAGTATCAAGCCAAAGTCAACAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21254 CAGCACAAGGTTCCTTCAATCTTGGATCTTCTTTGCCAGTACCCAGCCTTGGGTTATTCC Gene GeneID:618307|LOC618307:XM_002686094:50_cdna Constitutive 0 NULL GeneID:618307 3 GENE LOC618307 NULL similar to Histone H3-like centromeric protein A (Centromere protein A) (CENP-A) EMBV3_33063 TCATCTATGAGGAGATGCGTGGGGTGCTGAAGGTGTTCCTGGAAAATGTGATTCGGGACG Gene GeneID:619094|LOC619094:XM_002687273:144_cdna Constitutive 0 NULL GeneID:619094 5 GENE LOC619094 NULL similar to histone H4 EMBV3_15410 TACCGAGTATTGGCTCGTCGGGTGACACTTGATGGAAAGGTGCAGTATCTTGTGGAATGG Gene GeneID:615211|MTF2:NM_001046556:201_cdna Constitutive 0 NULL GeneID:615211 3 GENE MTF2 MGC137221 metal response element binding transcription factor 2 EMBV3_27152 CAGTCTTCTTCCTATTTTGTGGGGACAGAACCGGTGAGCAGCAGAGCCAAGAGATCTACA Gene BVT0102_102126 - 0 NULL GK000018.2:65755775-65787331 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25812 AACCACGGCGTGTTGAAGATAACAATCTGTTGACCCTAAACATCAACCGCAAGCTCGCCT Variant GeneID:515046|ARV1:NM_001035302:81_cdna 223^721 1 EMBV3_13253 GeneID:515046 28 GENE ARV1 MGC127960 ARV1 homolog (S. cerevisiae) EMBV3_37235 CTCATGGGAGGAACTTTCTGCATCATCTCACTGTGCACCTGTGTGGCCGGGATCAACTTT Gene GeneID:787003|LOC787003:XM_002687073:229_cdna Constitutive 0 NULL GeneID:787003 4 GENE LOC787003 NULL similar to rCG28098 EMBV3_08950 ATGGTGGCCTGGTGAGGGAGAATTTGCGACTGAAAGCTGAAGTTGATAACAGATCACCTC Gene GeneID:782050|RNF219:NM_001105458:7_cdna UTR3_Alt 2 NULL GeneID:782050 12 GENE RNF219 H12C13ORF7 ring finger protein 219 EMBV3_38691 AGGAAATGTCTCATTTCTTAGCAGTCAGGTGTCATTTTTACTGGCTTAATTAGGCAATAG Gene GeneID:516781|NAB1:NM_001102039:27_cdna Constitutive 2 NULL GeneID:516781 2 GENE NAB1 MGC166379 NGFI-A binding protein 1 (EGR1 binding protein 1) EMBV3_37182 CTGGCTGGGAGGGTCCATAGATGGCTTCTTACTTACACCAGTCACCATGCAGTTCCCTTT Gene GeneID:515313|LOC515313:XM_002689122:90_cdna Constitutive 0 NULL GeneID:515313 7 GENE LOC515313 NULL similar to olfactory receptor, family 2, subfamily T, member 27 EMBV3_13438 GTGGCCATTTCAGGAACTCTTGGTAGTGGTGTTGGCCTCCTATTGAACTTACCAAAAAGG Gene GeneID:504481|SC4MOL:NM_001098863:19_cdna UTR3_Alt 3 NULL GeneID:504481 17 GENE SC4MOL NULL sterol-C4-methyl oxidase-like EMBV3_03741 CTCAGGCCCGGTGCTCAGTCGTATGACCTGTACCTCTCAACTTTTGCCCTATCTGTTAAA Gene GeneID:526027|SPTBN1:XM_002691326:475_cdna UTR3_Alt 2 NULL GeneID:526027 11 GENE SPTBN1 NULL spectrin, beta, non-erythrocytic 1 EMBV3_09326 CGAACCCCTATCAGCAGTCTGTTTCCCTGGCTGTGGGTTTCATGGTGAAGATCATGGGAA Gene GeneID:515276|LGALS13:XM_002694986:173_cdna Constitutive 0 NULL GeneID:515276 18 GENE LGALS13 NULL lectin, galactoside-binding, soluble, 13 EMBV3_12041 GATGGGCACAGCTGGACTGTGTGGCCGGGGCCTCATTGCGAACTGTAAGGAAATTGAACT Gene GeneID:519874|FBXL15:NM_001110077:156_cdna Constitutive 0 NULL GeneID:519874 26 GENE FBXL15 MGC148515 F-box and leucine-rich repeat protein 15 EMBV3_34414 TTTACAATTCTGCCACTCTGGTGGAGTTGGATAATCATGCTTGGATGGCAGTCATGCAGG Gene BVV0102_236051 + 0 NULL GK000011.2:63760126-64770130 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11596 CACTCATGGGTACTTGTACATAATCTCTGAGTAAAATATATTCACACTAGGCAAGGCTAG Gene BVV0102_096444 - 0 NULL GK000010.2:10711993-10890934 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09156 GCTGTTCAAGGTCTACAACATCTCCAAGGATGAGCACCTCGTGTGCAGTTCCATCTGTGC Gene GeneID:616254|ICAM2:XM_002696096:153_cdna Constitutive 0 NULL GeneID:616254 19 GENE ICAM2 NULL intercellular adhesion molecule 2 EMBV3_43041 GAAGGATAAAAGCATATGAAGGAAAAAAGTGGCCTGTGTAGGTTGGATTCCCTACACAGG Gene BVT0101_015255 + 0 NULL GK000025.2:19981332-19992429 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09562 CTGACCACCAGGGACTTAAATGCACCCGAACTCTCACAGTAGGCAGTAAAAGAATGCTGC Gene BVV0102_298831 + 0 NULL GK000024.2:62271055-62319471 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139580 TCONS_00139579 TCONS_00139577 TCONS_00139573 TCONS_00139574 TCONS_00139576 TCONS_00139581 1 XLOC_084930 Coding TCONS_00139580 XLOC_084930 Coding Coding SERPINB5 24:62251599-62274973 j TSS104366 3646 1 TCONS_00139580_2 378 0.218869994514536 7 0.844307534334489 1.48901874429511e-07 7.02653434124261e-07 2.71834480670531e-06 1.85396716948949e-08 1.8611072077173e-08 0.000145597396651563 2.74705233732773e-06 7.14917180387758e-05 8.57357380779761e-05 0.000534240193685946 6.93291293489671e-05 2.01710398931026e-09 4.72964642505381e-39 0.000213121561931635 2.6863320108251e-08 0.0102348692479442 0.000615513237042439 0.00414898262595586 7.04469391306318e-05 4.93703858713415e-05 4.99123128787076e-06 0.00191196353024548 0.000599499828687064 0.00441680147507738 0.000276967975809545 3.11939400961703e-09 3.84312349200226e-07 0.000157815074906191 0.000145402983542834 0.000103318906317865 XM_005224214.1 SERPINB5 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 5 (SERPINB5), transcript variant X1, mRNA. 0.0 5963 100.00 0.906472846955568 NM_002639.4 ovalbumin Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), 0.0 1723 79.87 0.500548546352167 TCONS_00139580_2 sp|P36952|SPB5_HUMAN SPB5_HUMAN Serpin B5; 0.0 715 91.20 0.989417989417989 1 coding 0 0 0 0 -0.18896773353174 0.309209639338035 -0.0313706659864919 0.523585695269199 CTCCTTTCACTGCCATCTCTGATGCCCACAATGGAGGCCCTGCGACTGGCAAACTCGGCCTTTGCAGTTGACCTGTACAAACAGCTGTGTGAAAAGGAGCCGGCGGACAACATCCTCTTCTCTCCCATCTGTCTGTCCACCTCTCTGTCACTTGCTCAAGTCGGTGCCAAAGGGGACACAGCAGATGAAATTGGACAGGTCCTTCATTTTGAAAATGTCAAAGATGTGCCCTTTGGATTTCAAACAGTAACATCGGATGTCAACAAGCTGAGTTCCTTTTACTCCCTGAAATTAATCAAACGGCTCTACGTAGAAAAATCTCTGAATCTTTCTACAGAGTTCATCAGCTCCACCAAGAGACCCTATGCAAAAGAGATGGAGACCGTTGATTTCAAAGATAAATTGGAAGAAACGAAAGGTCAGATCAACAACTCAATCAAGGAACTCACAGATGGCCACTTTGAGAACATTTTAGCTGACAACAGTGTGAATGACCAGACCAAAATCCTTGTGGTTAATGCTGCCTACTTTGTTGGAAAGTGGATGAAGAAATTTCCTGAGTCAGAAACCAAAGAATGCCCTTTCAGAATCAACCAGACAGACACCAAACCAGTGCAGATGATGAATATGGAGGCCACGTTCTGTATGGGCCACATCGATGGTGTCAACTGTAAGATCATAGAGCTTCCCTTTCAGAACAAGCACCTGAGCATGCTCATCCTGCTACCCAAGGACGTGGAGGATGGGCCCACGGGCCTGGAGCAGGTTGAAAAACAACTCAACTCAGAGACGCTCCTGCAGTGGACAAATCCCAGCATGATGGCCAATGCCAAAGTCAAACTCTCCATTCCAAAATTTAAGGTGGAAAAGATGATTGATCCCAAGGCTAGTCTGGAAAACTTAGGGCTGAAAAACATCTTTAATGAGGATACCTCTGATTTCTCTGGGATGTCAGAGACGAAGGGAGTGGCCGTCTCAAATGTCATTCACAGAGTGTCCTTAGAAATAACTGAAGATGGTGGGGATTCCATAGAGGTGCCAGGGTCACGGATCCTGCAACACAAGGATGAGTTCAATGCTGACCACCCCTTTATTTATATCATCAGGCACAACAAAACTCGAAACATCGTTTTCTTTGGCAAGTTCTGTTCTCCTTAAGTGGCAGAGCCCGGGTTAAGTCCCACCCAACTTCTCTGCTGACTCTGCATCTAGACAATTATTTTCTAAACACAATAAATTGTTAATACTGCTGGGTCAGGAAGCCACTGGTACTCACCCTAATAGACCCTTTTTCCAATCCTTTTTTTTTTTAAATTTTCCCTCCCACTCCCTTAGAAGATGGTGCTTTAAGGAATCACCTTAGAGAAAAAAATTCGTGTTCATTATTTGTCAGACAATCCAGGGTTATTGGCAGGAACACAGTCTTTCTCAAAGAAAATTCCTCTAAGGAGGATCTAGAGGATTTTTATTACCAAAGCTTAGCCTTCCCTCTCTGGGATGCAGAATGTTCTAACATCCTCTTTTTCCTGGGACATGGGCGCTGCAAAGCTTTCCTGGCATGAATGAGGCTTGGGGACAGTACATCCACAGCTCTGTATGCTGAACAAAAGGGACCAATTTTTCCTTCGAAGTCTGACTTTGGGGGGATTTTAGAAAGACAATATGTTGCATATACTGTATGCTATGGAATTCCACTGACAGAAACTGGAACAGCACCCTATAAATCAACACCTTAATATGTCTGCCATAGAATGTAAAATACTGGCACAGAGCAAAGACACTAGGCTGCCCAAAATACCAGGTTTTGCTGCCAAATGAGCGTGTCTCCTGCTTACGAAAAGACTTTGTTTTCGGGACTTGGTGGAATTTTGGCGAGTTGGACCTGTGGTAACCAAGGGCAGCGCCTCGGTGGGAAGTTCAGGTCTCAGTAAAAGTTCGCCGTAGAACAGCACGGTGGGCTACGTAGAGTTCCCGGTGCTGTGCAGCAGGTCCCGTCACTTGTCTGTTTTATACACATTATCCACAGTGTACATGTGTCAGTTCTAATCTCCTAATTCCTCCCACCCCAGCCCTTCCCCGCTTGGTATCCACTAGTTAACAATACCATATCCTATATTTGAAAGTTGCTAAGAGGGTAGATCTTAAAAGTTCTCACCACACACATGCAAAGTTGTAAGTGGGTGAGGTGATCGATACGTTAACTCACTTTACTGCAGTGGCCATTTCGTAATATATTAGAAATATTCAATCATTACATTGTACTCCTTGCTATGCTATGCTATGCTAAGTCGCTTCAGTTGTGTCGGACTCTGTGCGACCCCATAGATAGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGTTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCATGCCCGACTCCTAGCGACCGCATGGACTGCAGCCTACGAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCACTGCCTTTTCCGATTGTACTCCTTAAACTGGTACAATGATTTATATCAAGTATATCTCAATAAAGGTCAACAACAACAGCAACGAAAAGATGTAACAGGTTGCTGCAGAATAAATAATTTAAGCTAACTTAAAAAAAAAGCACTTTCACTTTTGATAGAACGCCCACCTGTTGCTGGGTTGGCAAGAGACCACTGGCAGGAAATTCAAGCTTGTGGATGTCTGACCACCAGGGACTTAAATGCACCCGAACTCTCACAGTAGGCAGTAAAAGAATGCTGCCGGTGTTGAAGGGACTTGCGTGATTGCTGTGATTTAGTGGGACGGGGGAGGAGCTTAATGCTGTTGGGCGGGCAACTGAAAATGCTCCTGCTGCCTCGGTGCGTATGTTTCTCGGCGTCTACTGGTTCAGTTACTGTGGATAGCTAGTTGGTAACGCACAATAATAGTATGTTTTTAAAGATGTTTATGAGAAGTTACCTGTGTCACAAGTTCAAGTGTTAATTCACTGCAGAAAGAGGGCGGCTGGAAGGTTTGCATTCGAAAGGACGGCAGAACTCCTTCACCACCCTTCCAACCCACCGGCTTTGTTGTAAATAGGTTCAACTTTCTTTTTGCTCTGAAGGCTCAGTATTGAATTCCTTTTATGCTGTTGAAAATCAAGTATTATTGAATTACAAGACTTGCTTTTTCCCATGAAAGTTGGATTTTCTATTTTGAAATAGAACCAAGCCAACCACTGACAAAATGTTTTTTTGCGGGGAGGATTGATGTAGAATAAACAGAAGTAAGAATAATGACTGCCCCTACTTCTGGTCTTCCTTCCTTCCTGCACACCAGCTCTTGCTTCCTCCTTCTATCCCCTGTCATCCTGGGAGGAAAGGACCAGGGAAATGGCAGGTTAACTTCCAACTACATAAAAGAGTTTGATGAAACCAGGGCCTTGTAGGAGGCTGTGGAACTCCCCTCCAGCCTTTCCCACCTTGGGCTCTGCCTCCAAATGTAGTTTTATCGGGTAAGCTGTGTATGCCTAAAATGTTTTCTTATTAAGTACTCTTCCCGTCCCCCGTGTCATGCACATTGTTTTAAACCAATTACCGTGTCTCTGAACCTA EMBV3_08908 GATAAGATCTCGATTTTCAAAATTATAGCCAATGGGTGGTTCCGGTTCCACCGCGGAGAC Gene GeneID:781462|LOC781462:XR_083735:71_cdna Constitutive 0 NULL GeneID:781462 8 PSEUDO LOC781462 NULL similar to translocase of inner mitochondrial membrane 8 homolog A EMBV3_09843 ATGAAGGAGCTGGAGCGGCAGCAGAAGGAGGTTGAAGAGAGACCAGAGAAAGACTTCACT Variant GeneID:616994|LRRFIP1:NM_001102308:17_cdna 277^438 2 EMBV3_40079 GeneID:616994 3 GENE LRRFIP1 MGC151609 leucine rich repeat (in FLII) interacting protein 1 EMBV3_04449 CCACTGGGCTAGGCTTTGCTTGTATTAAAAATCTGGTGGTGAAAGTGATGTTTCCTGCAC Gene BVV0102_324427 + 0 NULL GK000010.2:12114297-12151278 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06033 CCACCCCCTTCTCATTCCACAACGAACAGCCTGTGGACATCTGGGCCCACCAGTCCCCAC Variant GeneID:550622|ATP6V0C:NM_001017954:261_cdna 670^780 1 EMBV3_34010 GeneID:550622 25 GENE ATP6V0C MGC127859 PLP ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c EMBV3_38550 TGGCGCTTGGAAACCATGAGGAACCTCGAGCTCCTGATGGAAGAACTTGATACCTAGCAT Gene GeneID:407771|CCR1:NM_001077839:77_cdna Constitutive 1 NULL GeneID:407771 22 GENE CCR1 NULL chemokine (C-C motif) receptor 1 EMBV3_30183 CTTTGCAGCCGAAGTTGGACAAACACTATGCAGTCAGCAAAATAAAGCCTGGGACCTGAC Gene BVV0102_168941 + 1 EMBV3_39643 GK000003.2:40025401-40377690 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11510 CTACGGCCCCAAAGTCAACTTCCGGAAACAGAAGCTAAAGAGGGCCGGCTTCCGAGGCCT Gene GeneID:512094|ALKBH4:NM_001075553:152_cdna Constitutive 1 NULL GeneID:512094 25 GENE ALKBH4 MGC140820 alkB, alkylation repair homolog 4 (E. coli) EMBV3_36527 CCATTACAGAAAGAAAGAAGCGTAGAAAAGCTTTATCCTGCCAAGAGGTCACTGACGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41502 TTGTAGATGAAGGAATTAAGACATTAGAAGGTGCAGAGTCCAGTGGTGACATGGATGTCC Variant GeneID:614688|POLB:NM_001034764:97_cdna 520^699 3 EMBV3_13648 GeneID:614688 27 GENE POLB MGC128623 polymerase (DNA directed), beta EMBV3_39190 TGCAAGGGCAGCGCTGTTTTTTGAGGGCGACTCTCATCCACACCGTCCGAGAATGATCAT Gene BVT0102_154461 + 0 NULL GK000016.2:80878573-81038655 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29988 GTTGGAGGTTGCAAGTATGTTTTAGCATGTGTTTGGTTCTGGGGCCTCTCCTGCCTCCCT Gene GeneID:353110|NGFR:NM_001102478:41_cdna Constitutive 0 NULL GeneID:353110 19 GENE NGFR MGC148470 nerve growth factor receptor (TNFR superfamily, member 16) EMBV3_32291 AAAGGGAGCCGCCAGGACACAACGGCACGATGACTCCTGTGACCCCTGTAACCTCAGTGA Gene GeneID:100139648|LOC100139648:XM_002688420:40_cdna Constitutive 0 NULL GeneID:100139648 6 GENE LOC100139648 NULL similar to hepatocyte growth factor activator EMBV3_08639 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22052 AAGACATCATTTAAAAGCATACTTCGGGGCCGCGGCCGCCTTTGCGCGTGGCTATCCCAA Gene GeneID:516179|LOC516179:XM_002694881:889_cdna Constitutive 0 NULL GeneID:516179 18 GENE LOC516179 NULL similar to NK6 transcription factor related, locus 2 EMBV3_16397 GCGCAGTGTGTCGGGCTGTAATATAACCATACTTGCTGTTGTGTTCTCCCATCTCAGTGC Gene GeneID:404059|IGIP:NM_205771:205_cdna Constitutive 0 NULL GeneID:404059 7 GENE IGIP MGC152024 IgA regulatory protein EMBV3_12907 GCACAGGTGCGTTTCTTTAACGAGGTTACTCACCCCAAACACATCTTCCAAACCCAAGCC Gene BVT0102_092362 + 0 NULL GK000008.2:64587267-64718455 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38664 CTGGGACAGCAGCGGACACAGACATGACAACCCAGAGTTGTGACGGCCAACCGGATGCTG Variant GeneID:511207|PSMB7:NM_001038527:17_cdna 302^354 2 EMBV3_29904 GeneID:511207 11 GENE PSMB7 MGC133789 proteasome (prosome, macropain) subunit, beta type, 7 EMBV3_17285 CTGCCGAGCTACACCTGGTTCACTGGAACACCAAATAAGAAGGCCCCGGGGCGGTGTCCA Variant GeneID:280740|CA2:NM_178572:3_cdna 340^741 1 EMBV3_22203 GeneID:280740 14 GENE CA2 NULL carbonic anhydrase II EMBV3_30877 GACAACACTGCCAAGCATTCTTATGTCCTTGTCAGCAAGATGAATCTCCCCCGCAATGGG Gene GeneID:509870|MAGEB3:XM_002700267:18_cdna Constitutive 0 NULL GeneID:509870 X GENE MAGEB3 NULL melanoma antigen family B, 3 EMBV3_18025 CCTTTCAGAGCCCACAGAATGGATAACCTCACAGTGTTGGATTGGGGTGAGTAGTAACTG Gene GeneID:516689|GPM6B:NM_001104981:32_cdna UTR3_Alt 2 NULL GeneID:516689 X GENE GPM6B M6b MGC179319 glycoprotein M6B EMBV3_29621 CTGACCCGTCTCGTGGGCGAATCCTAAGTACCTGTTCCTTTTCCGTTTACTCCCTACCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32744 GACACCAGTGGTTGTGGATTTCCATGCACAGTGTCAGCTGTGCCCACCGTACTGGCTATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32507 CTACTTAAAGGTTCAAGAGAGCCTCCAGATCCCCAGGACTCCAGGTGCAACCCTGCTCAA Gene BVT0102_111674 + 0 NULL GK000026.2:14455538-14460227 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42802 AAGTACCCTGGAATAATTTAGTAAATGGCTGTTGAAGATTAACGACCTTCATGAAGAAAA Gene GeneID:538604|ABI3BP:NM_001080307:23_cdna Constitutive 0 NULL GeneID:538604 1 GENE ABI3BP NULL ABI family, member 3 (NESH) binding protein EMBV3_38098 GTGCCCTGGTCCAGCTGCAGCCACTGACAGGTCCTGGATGAAGCCCTCCTCGGCCGCCTC Variant GeneID:534606|RPUSD3:NM_001038561:155_cdna 729^868 3 EMBV3_31435 GeneID:534606 22 GENE RPUSD3 MGC133790 RNA pseudouridylate synthase domain containing 3 EMBV3_04623 AGCTTCGGCACATCCACAACCTCAAGCACTGGGGCCTATACGAGGTGCTCATGGAGAAGT Gene GeneID:508325|SRPK3:NM_001083390:46_cdna Constitutive 0 NULL GeneID:508325 X GENE SRPK3 MGC143354 MSSK1 SFRS protein kinase 3 EMBV3_20905 TTTGTGATGGAATATGTTAATGGGGGAGAGTTGGAGAATTTGATGCTGGATAAAGATGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08879 TATCACTTTGTTAATAATTTACTATTATTTATAGAGATTCAGATGCTTTTAGGGCTAATG Gene GeneID:520720|UHRF1BP1L:XM_002687526:486_cdna Constitutive 0 NULL GeneID:520720 5 GENE UHRF1BP1L NULL UHRF1 binding protein 1-like EMBV3_28671 GCATGGTTATGAGTCACCTACCTCAGTTTCTTTCTGCCACCTCTTGAATATGGCCGCGTC Gene BVT0102_026944 + 1 EMBV3_04799 GK000003.2:77511242-77571198 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170332 TCONS_00170334 TCONS_00170324 TCONS_00170331 1 XLOC_103559 Coding TCONS_00170331 XLOC_103559 Coding Coding WLS 3:77396193-77514577 j TSS127291 5424 1 TCONS_00170331_3 450 0.0435103244837758 11 0.954275529425678 5.85816372325567e-18 0.000289757570529588 6.64662920208906e-10 0.000816092519276492 2.79564773268322e-08 1.6779118221729e-10 7.10938540596861e-10 1.08032432851581e-14 1.30092722690059e-08 1.31902755159698e-08 7.88734982732487e-38 2.34450425966291e-19 5.39000276904442e-15 2.06879865945677e-14 3.82539763689604e-36 0.000944048166826109 6.73958209964999e-28 0.00110956947284612 1.12628495804111e-23 1.03547322520604e-20 1.94904391421531e-07 0.000791745168465479 1.58296036605182e-23 0.000929559385974707 0.00129641870374347 0.00126122474425715 2.39880812844009e-08 1.18522239716243e-06 2.00877911224345e-05 6.60028834283289e-05 XM_005204461.1 WLS PREDICTED: Bos taurus wntless homolog (Drosophila) (WLS), 0.0 4385 100.00 0.448008849557522 NM_001193334.1 WLS Homo sapiens wntless Wnt ligand secretion mediator (WLS), 0.0 3341 90.09 0.453355457227139 TCONS_00170331_3 sp|Q5T9L3|WLS_HUMAN WLS_HUMAN Protein wntless homolog; 0.0 862 96.30 0.955555555555556 1 coding 0 0 0 0 -0.547259863406147 0.0181298637182852 -0.313335115936866 0.000909791358895977 ATCGCTTCCCTGCTCCTTTAAGCGTCCACAGGCGGCGGAGCGGCCACAATCACAGCTCCGGGCATTGGGGGAGCCCGAGCCGGCTGAGCCGGGGGAATCCGTGCGGGCGCCTTTCGTCCCGGTCCCATCCTCGCCGCGCTCCCGTACCCCTGAAGTTTTGCAGCGCCTGGAAAGGAGGCGAGGGAGAAGGGAGCGTGAGAGGGGAGGGAGCAAAAAGCACACCTTAAAACATTTATTTCAAGGAGGAAAGAAAAAGGGGGGCGCAAAAATGGCTGGGGCAATTATAGAAAACATGAGCACCAAGAAGCTGTGCATTGTTGGTGGGATTCTGCTTGTGTTCCAAATCATCGCCTTTCTGGTGGGAGGCTTGATTGGAGAAAATGCAGAAGTTTCCATGGATGTTTCTCTGGCTTACCGTGATGATATGTTTGCTGAGTGGACTGAAATGGCCCATGAGAGAGTGCCCCGGAAACTCAAATGTACCTTCACCTCCCCCAAGACCCTAGAACATGAGGGCCGTTACTATGAATGTGATGTCCTTCCTTTCATGGAAATTGGGTCCGTGGCTCATAAGTATTACCTTCTAAATATCCGGCTGCCTGTGAATGAGAAGAAGAAAATCAACGTTGGGATTGGAGAGATAAAGGATATTCGGCTGGTGGGAATTCACCAGAATGGAGGCTTCACCAAGGTGTGGTTTGCCATGAAGACCTTCCTTACACCCAGCATCTTCATCATTATGGTGTGGTATTGGAGGAGGATCACCATGATGTCTCGACCCCCAGTCCTCCTAGAAAAAGTCATCTTTGCCCTTGGGATTTCCATGACTTTTATCAACATCCCAGTGGAGTGGTTTTCCATTGGGTTTGACTGGACCTGGATGCTCTTGTTTGGTGATATCCGACAGGGCATCTTCTACGCAATGCTTCTCTCCTTCTGGATCATCTTCTGTGGTGAGCACATGATGGACCAGCATGAGCGGAATCATATAGCAGGGTATTGGAAGCAAGTCGGACCAATTGCTGTTGGCTCTTTCTGCCTTTTCATATTTGACATGTGTGAGAGAGGGGTACAACTCACGAATCCCTTCTACAGTATCTGGACTACAGATGTCGGAACAGAACTGGCTATGGCCTTCATCATAGTGGCTGGGATCTGCCTCTGCCTCTACTTCCTGTTTCTGTGCTTCATGGTCTTTCAGGTTTTTCGGAACATCAGCGGGAAGCAATCAAGCCTGCCAGCCATGAGCAAAGTCCGGCGGCTACACTATGAGGGGCTAATTTTCAGGTTCAAGTTCCTCATGCTTATCACCTTGGCCTGTGCTGCCATGACTGTCATCTTCTTCATTGTTAGTCAGGTGACTGAAGGCCATTGGAAGTGGGGTGGTGTCACAGTCCAAGTGAACAGTGCCTTTTTCACTGGCATCTATGGCATGTGGAACCTGTATGTCTTTGCTTTGATGTTCTTGTACGCGCCATCCCATAAGAACTATGGGGAAGACCAATCCAACGGTGATCTGGGTGTACACAGTGGGGAAGAACTCCAGCTCACCACCACTATCACCCACGTGGACGGGCCCACTGAGATCTACAAGTTGACCCGCAAGGAGGCCCAGGAGTAGGAGGATTCAGCACCTGACTGGGACTTCCCGCCACATCCCAGCCATTTTTACTAGAACGGGGAGCGTGCCAGAGAGCTCCACATGCCAACGAACGCTCTGTCTCTTAGCTGTGGTTTCTTGGACCAGTGGTGTGGACATTTGTCAGCTTGCCTTCTGACAAGTAGTTCCCGGAGACAGACTCCTGCAGCCACTAATGTGTTGTGTATGATAACAAAACCTCTGGTATGACACATTTTCTGTGATCATTGTTAATTAGTGACATAGTAACATCTGTAGCAGGTGGTTAGTAAACCTCATGTGTTGGGGGTGCACTCCTTGGGGAATGGTTTGGGCCAGATGGGGTCTATATGGAGTGGAATATTTGACTCCTTTTTTTCTTGTTTTTAGGTTCTAGGGTAGAGTTTAACATTCTTTGCAGTCCAAGATGGGCTGGTGTCATAGTCTTCTCACTCCTAATCCATGACCACTTTTTTCCCTATTTATATCACCAGGTAGCCTATTGAGTTAATATTTAAGTTGTCAATCGATATGTGTCCCTATTTTTTAAGGCATAATATAAAATAACCGAATTTCATGAGAAGATCTATTACACCAGGGGCATTTCAGCTTTGAAACCAAATCTGTGTATCCAATACTAACCAGTCTGTTGGATGTGGGTTTTAAAAAAAATGTTTGCTAAACTATCCAAGTAGGATTTATTGTATTAAATGGCCTTTGGGTCTAAAAAACTTTTTTAACCTCTTGCTTAAAATGTGTTTTCTTTTGATAAGATGCTTCAAACAGCCTCCACAAGTGTAGATCTGATCATTTAAATAAACCTGTATGTATATGCATGTATGTGTATGCACACCTCGTCCTCCTGCTCAGCCGGAACACATGCATGCAGATTCTTTTTTTTGAGTTGTGTCTATGGGGTGGGGGGAAATAGCTTTATGAAAAATTAAAATATTTTGCCATCAAAGTTTTGGGGACAGTATATATTTCTGGAAATAGGGTAACATTTTCCGCACTGCATGGTTAACCTCCACTGGATGGCATGTGTGGCAGAAAGCGTGTGTGTGGGGGGCAAGTTAAATGATTTAGACGTAGACTATGATTCCCCTACTATGCCCAGTTCCCCAAGTAGACTGTGTCATTGTACTTTAACTCTGCCATTGGAAAGGCAACGTAATACAGCAGAGAAAGAATAGTGGGTGGGAGGTTAGAAGGCAGTGTTTCCTAGCAGAGGTCTGACATTTATTACATAGTGTGACCTTGTTGAAGCCACCTGACCTGGCTGTTCCCTCACATATAAACTACCATTCATGAAGTTTTAACTGCTTCACGGGGTGGCAGTGCAAATTAGATCAGTTAATGTGTATAGAAATGCATTTTAAACTCTAAAACTGTGTAAATATGTTCTTTTTGGAGTCTAAAGACAATTTCATGAGTGTCCTGTTTTTCAGACATCGATGCCTGGAGGTTTGGGACACAATCCACTTAATCTGCCTACTCAGCACTCCTTCTCTATCCTTTCTTTTCCCTGATTTTGGCTAAAGCTGTGGTAAATAGTGATGGGAGGAAATATTTTGGTTTTGGCTGTTCTCTCAGGCCTTTTCCTGTCCTGGTAAACATTTGATGGTGTCTGATCCAATGCACTCAGCATCCACTTCTGATTGATCACTGTGGTGCCAGGCTTTAAATGTAGCCCATGTCTCACAGTCTGAAAGGGAAGACGAAGTTAAAATACAACAAGTAATCTCGTGCCCCAGAGGATGGAGGCAGAATTTCTCCAAGGAGATGAGAAAAGGGCCTGAGATAGGTCTTGAAGAAGAAGTAAGATTTTACCAGGGCTGAAGGACAAAGGGAACAGCAGGACGAAAATCATACAGGAAGTGAAGAATGGAGAATGCTTAGATAAAGCTGGTCATCAGGCCTGGCTGGCATATAGAAGGAGTGGAAATAGCAGAAGGTAAGCCCCATGCATCTGTGAGCCAAAATGAGAAGGGTCCTTAATGCTGTGGGAAGAGTTATCAGACTCAGCCTAGGGTTTTATGTGGAGACGTGATATGATCAGAATTACTGCAACAGAGAGGCTGGACAAGCCCAGGAAAAAGATCACAAAGGCTGAAAACAGGGCAATAGTAGAGGACATGGAGAAGATCAGATTAGTTTTGGAGATAGAAGTGGCAAGGTTTGGGCATTCTGAATGTGGACATGAAAAGCAACAGCAGAGTCCAATGTCAAGCCCTTTGAGGAGAGAGAATGGTATGGCCCTTTAAGGATTCCTGGAGGGGCAGCGTCAGAGAGTCTATCACCTAAGGGTATGTATCCATACTAGAAGTTAAGTCTAGCAAGCTTACCTAAACGAGAGACTTTAGCAGAACCTTCCAAGAGCACCAATACCAGTAATTCATGGACCTTTCCACTAGAACAGTTCCATTTACTAGCTGTCTGTCTCTCTAGCTTCCGAAGTAGGGGAGGTACATGAGTGGCTCAGTCTCAGGCAAGCGGCTGCCCCTTGCTGATCAACTGTGATCAGGAAACCAAGTCCAGTGGCCGCTAACAGATTACCCTGTGGATTGGGGTCAGTTTCTGAAGAATGGAGAGTCCATTTTGAGTTGGCACACAGTCAGAAAACATGTACTACAGTGGGCCAGATGAGAAGTTTGGATTTGCTTGGGCTGGGTTTTCAAAGCTGTCTTCTGGAAGAAATGACAAGCTAACAGAAGCAAGAGGAGAAGCAGACCAGTCAGGGAAGGAGGCTTTGCAGCCATCACTGAGAATGACGTTGAGCTTGGCAGAGCATCAAAACATCACGTAACTATGGTGAACCAGACGCGGCCATATTCAAGAGGTGGCAGAAAGAAACTGAGGTAGGTGACTCATAGCCATGCAAAGTATCAAAGAAGCCAAAGAAAGAACCAGATCAAGGGGGGAAAGTTAGATAACCTGAGAAACTCAACAGCATTTAAAGATTGAATAAGGCATGTTGGATTTGGCATTGATATGTGGGACCTCACGGCAAGCGCAGCAATTAGACGTAGAATAAGATCAGTGAGTGCTCGTGATGGGAAGATAAGAGGTAGGATGGTGGCTCCAGGAGAAACCAGAGTCTGGGGAGAAAATGGGACTGGATTTGTAGACATTGAGGGTGAGAGTCAGCCATGAAGTCAAGATGATGATGAAGTAGCTTACGCCCCAAGAAGGTCAGAGACTTGGGATAAAGGACACAAGCTGATGAGTTAGTTTTGACAGAGTGAAAGGTCACTTTTATCCAGAGACAGGAGAGAAGTAACCAGTGGATGCTGAAGGAGAAACTTGAGGTCAAAAGAAGAGAAGTTGGCAACCGGTCCCTCTGTGTGTTCTGTTTTCTCTTTTCCCCTTGAACATGAAATGAGCCTAGAGTTGTCCTGAAGAATTTCTCGGTTTCAACAATGCAGGTAGAATACATTTGTTTTCAATCAGCAGAAAGTTCAAGAAACGCTTCAAGAGGTGAGAAAAAGCCTGTAATAAGGACTGTCAACCCAGAGCAAAAATTAATTGTTGGTCATGTATATGTTTTACTAATTGTCTTAAAATTTTTAAGTAATTTTGAAGAATATGATAATTGTAATAAGTTTAAAATTCCCCAACTGTCTGCTTTTTAAAAATAAGAAAACTTGCCATTTATGCAACAAACAGGTAAAATACAATTGATATTTCCCATAGAAAACAGTCAGTTTTATATTGACTTATTGGGTTCACCAGGTGTTAATCCTACATTTTCCCCTTAGGGGAAGAAAATGTCTATAATAATGAAATAAATAGTTTCTTTCACAACC EMBV3_23789 AAGGGAGACCCTGCTGCCTGAGTGGATCCCGGCCAGTGTGGCCTGTGAATGCCAGACCTG Variant GeneID:616090|MBD3:NM_001128505:101_cdna 496^545 1 EMBV3_29456 GeneID:616090 7 GENE MBD3 NULL methyl-CpG binding domain protein 3 EMBV3_06947 GAGTCAGTCCCGGACAGTCTGGCTCCAAATACAACTCAGAACTTTATTTTCCCAGTCCCC Gene BVV0102_127376 + 0 NULL GK000030.2:39221469-39253922 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09681 GGATGTCAGCAGCTAGAAAACCCAGAAAGTACAACTAGAGGCTTGGAGTCAGTTAAGTAG Gene BVT0101_060615 + 0 NULL GK000030.2:8926655-9057500 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19972 TCAGAGACCAGTGGAATCACATTTGCCGCGGGTTCTCGAGTCTCTCCTGATGTGCTGTAT Gene GeneID:531070|BEST3:XM_002687399:123_cdna Constitutive 0 NULL GeneID:531070 5 GENE BEST3 NULL bestrophin 3 EMBV3_37524 TGAGCTCAGCCGTCGACTGGAAAACCGGCTGGTGCTGCTGTTCTTTGGTGCTGGGTCTTG Gene GeneID:540608|NXNL1:XM_002688574:269_cdna Constitutive 0 NULL GeneID:540608 7 GENE NXNL1 NULL nucleoredoxin-like 1 EMBV3_22501 AGGACACTGATCCAGATGGGCATGGTGCATCTCTAACCTGCTGGAGTCCCTTCACATGAT Gene GeneID:539832|CCDC56:NM_001034683:195_cdna Constitutive 0 NULL GeneID:539832 19 GENE CCDC56 MGC127308 coiled-coil domain containing 56 EMBV3_06316 CAGGACTCTTGTCCCCATTCTTAACAGTTGAAGTACCGAGGAACTATTTGGGGATCGAGG Gene BVV0102_263126 + 1 EMBV3_27959 GK000003.2:20824140-20825191 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20930 AGGTTGCTGAGGTGTAGTGTTTGGAGATCTACAGGGTTAAAGTGTTGCAGAGAGTTACTC Gene GeneID:281671|CCNG1:NM_001013364:2_cdna Constitutive 1 NULL GeneID:281671 7 GENE CCNG1 NULL cyclin G1 EMBV3_16991 CTGGGGCTCAGGGATAACTGTGTTCTGCTAAAAGGGAAGATGCTCTTGTGAAGGGTAGTA Gene GeneID:535222|EFEMP2:NM_001076049:66_cdna Constitutive 1 NULL GeneID:535222 29 GENE EFEMP2 MGC139987 EGF-containing fibulin-like extracellular matrix protein 2 EMBV3_41388 GCCTTGCTCACCAACGCTTGGTCTCCCCATGTCATTTTTCCCTTTAACTTCCAGCTGAGT Gene BVV0102_178848 + 0 NULL GK000008.2:78952796-79242447 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123177 TCONS_00209707 TCONS_00252910 TCONS_00163708 TCONS_00087333 TCONS_00142119 TCONS_00078273 7 XLOC_074731 XLOC_128218 XLOC_155851 XLOC_100000 XLOC_052448 XLOC_086544 XLOC_047268 Coding TCONS_00087333 XLOC_052448 Coding Coding - 18:60099204-60104597 - TSS64866 3424 1 TCONS_00087333_6 228 0.745327102803738 4 0.365727002967359 2.19244943727353e-05 0.000128019565123695 8.95434881124178e-06 3.32017977940243e-05 1.42190393721642e-05 1.34870592299169e-05 3.00120050314188e-05 1.37381101407241e-05 5.19574221732309e-05 4.57008153539214e-05 8.15302255054116e-05 6.24190749390496e-05 0.000111144300056573 0.00013840838573323 2.9482845311819e-05 0.000849180935131867 0.000171676418529148 0.00043595231710399 1.90428655872262e-05 0.000160179434390367 9.29276712359004e-06 0.000431904899823708 0.000176827486388542 0.000375155260591173 1.74220050906045e-05 1.27388646202201e-05 6.76514808694386e-05 7.27671197256516e-05 0.000101386347829081 0.000258589735024459 XM_003583488.2 ZNF836 PREDICTED: Bos taurus zinc finger protein 836 (ZNF836), mRNA. 2e-131 475 72.60 0.263726635514019 TCONS_00087333_6 sp|P62684|GAK5_HUMAN GAK5_HUMAN HERV-K_19p13.11 provirus ancestral Gag polyprotein; 2e-12 67.0 25.79 0.671052631578947 1 coding 1 1 1 1 -0.243221394646696 0.235301780295885 -0.0297674289666016 0.539747656952011 GAAGTTCCGCCTCTAACATCGTGAGTGAGCAGTTTCTAACCCGGAAACGTTCTCCGAGGGACGGTCGCACTGCAGAGCGTAAACTTCTGATTTCTAGGGTAATTCTGTGGTAGGCGGTCTCCCTTGTTCCACTGTCAGGGTCTCGGAGCTACTAAGGGCCTAAAATCCTAGCATCCGGCCCTCCCCCTCAAGCAGAGTCAGACGGCGCCAATACTTGTAGGGTATGTTTTCCATTGTGTTTGAATTCGCTCTGAGGCTGTTCCGTTCCCTTGACTTCAGTCCAGGCGGGCATCTTACTCGCTCGCCATCCTTGTAAATTCGTGGGCCAGGCGATCAGGCGAAGCAGAGTCAGAGAGCCGGACAGAGAAATAGGAAAACTTAACGGCAACAGAATGAAGGAGATCGGAACATAGAAGATGGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACACTGTGCGACCCCATGGACAGCAGCCCACCAGGCTCCCCCGTCCTTGGGATTCTCCGGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAGTGAAATAAAAGGAAAGCGATTACGCCTTGAAAGGAGCAGGCCTCTGAAGACTTGTGTTGCCTGAGGAAGAAGCCTTGAAGTTGAAGAAGGGGAAGGAAAAGGAGTCAGGAATGGCTCTTGCTCAGGGTAAAGAAGCTGCATGTGGAAGTCAGGTATTATATGCAGAACATCTGGTAAAATCTGGAATTCAGTTCAATAAGGGGAAATTTGTTCTGATTTTTTTCTAATGCCACTGAATGTAAATGAATGAGTCACTTTCTTCAAAATCTTAATGATTGAGAGTGGAATGACAATTCAGAAACAGACTTCAGTGATAGTGGGTGCTTTTTTGCATTATTGAATTTACTCTATGCAAACAACTTAAATAGGGGAAATTCTTTAAATCATTTTTATCACCTCCATCACTCAGAAGTTGTGTTTCTATTCCGTGAGTTGTATTGGGTGACACACTGTGCGGGGAGCCGGTGAGGCATTCCACTCGTGACAAAGGTCATGAGGAAGGAGGCTCGGCATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCCGGATATTCTCGAGCATTTTCCCCCAAAAAACCAGAGTCTGCCTACTTGATTGCTTTGTGCTCTCACCTCTGACTTTACTGGGGGCTGTCCCCTACCACCATCTCTCTCTCTGTGTGTCAAAGAGTTAACTTACAGCTCCAATTAATAAAGTTCCTGGGCAATTAGGAGTGTTTAAATCCAAACCCCTCTGATGGCTCTCTAACTCGCCTGACAAGTTTACCCGGACTCCTGCAGCTATGCATACGATTGTTTACAGTCTCCTAGCCTCGAGAGGCATGGGAAGCTTAAGATATTCAAATAGCTTAGAGCCTCTCAGAGAGTTAAAAACTGTCAGAATAAACTAGTAAAGGATTTCATTGATGAGTCAATGCTTGTTGCCAAGTTTTCACATCCCCTGAATTGTATCCTTGAATATGTATCAATTAATAGTGGGTATGTAGAAAAAATAAGTAGTGGCCTTGGTGTTAGTAACTTTAGACCCTTAAGGTAATAAATTCTTTCTTTGTTGTAAACCCATTACACATCCGCCCTATAGGAATGCAATTTTATCTTTGGAAGATGGTGCCAAACCTTGAAATAATTACTCTTAGAGAAAGTAAGTCTTTGTTGATAAGTCCTTGTCAAGAGTCATAAAATGTTAGTAGGCCTTCTGGCCAGAAGATGATGTAAATCACCTAAACCATTTGTATACGATACATTTGCAGGAAAGAAACCTTGGTTTTTGATAAGAACCAAAGACTGCTGACTTTGCATCCCCTATTATCCTCTATGTGTAACTTAGGGTATAAAAGCCCCTGTTAAAAATAAAGCTACGGGCCTTGTTTACCAGCGCTTGGTCTCCCCATGTCATTCTTCCCTTTAACTTCCAGCTGAGTCTCCATCTGGAGCGCGGAACCCACCACGCTGACTAATCATGCCTGGGCTTCTAAGACCCACTCGAGAAGGTGTCTAGGGTGAGACACCTTCCGCTATTCGAGAGGGCGCCTGCGGCCTACGTCAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCTTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTCATTCTGTTGTTCTCTATATCTCTAATTAGCATATAAATAGTCGCCTAGGCCGTCTCTCCTTCGAATACCCTGGATCAGCTGGGGCTGGTCCCCAGCAGGTGGCGCCCGATACAGGATTTTCGAAGGTAAGCTCCCAGCAATTGGGGTTACCAGCCCTATTGCCCCCCGTTCTCGGAACAACTGGGTTATCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCAACAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGTCACCAGCCCTATTGTTCTTCCAGTGTTCGGGATGGCTAGGACCCCACTCAAGGGAGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTAGACTTAGAGAGAGAAAACAGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGATAGCTTAAAGCAAAATCTTTTACTATACTTAATTTTCTGACATGGGTAATACTGAATCAAATGAAAGACAGCTCTTTATAGGAGTAATTTTACAGTTATTAGGTAAAAGAGGAATCAAAGTTAAAAAATCTGCCATTCAGTCATTTCTTTCATTTGTACAAGAGCACTGTCCCTGGTTTCCAGACGAAGGCTCTGTTAACTTAGATGTCTGGGAAAAAGTAGGAAAACAGCTAAAAACTTACCACGCCGAACACGGCTCAGAAAAGGTGCCTAATGACGCCTTTTCCTTATGGAATATCATTAGAGATGTCTTAGACCCTGCCCCTGATTCAGAAAAAGTACATCTTAAAAGTGACAGTGAAGAAAATGCTGTAGCTAAACCTGCCCCTGAATCTAAAAGAGTAACTTTTAAAGAGGAAAATGATGTTGAAACTGTAGTTAAACCTGAGGAAAATGAGAAAAACGAAGACCCGCCCGACTATCGGCAATTAAGAAAAATGTTAGCAGCCATGACTACTCAGGAACAACTTAAAGATAGGGATGAAAAACAAGATCAGCCTTCCCCAAAAGAAAAAGAGAATTTAGGCGAGATCACAGTTAAATATCACCCTGATGGAGATCGGCATCTCTTAAACAAAGATGCCCCAAAAGGCTTAAGAGAAGCTTCCCCTGTCAAGCGATCAGCTCCAAAGAGCTTAAGGGAAACGTCTCCCATCAGGCCATATGC TCONS_00087336 s 3' 2994 TCONS_00087336 s 3' 331 EMBV3_32311 AAGGTGGATGCCAACTTGAAGACGGGCCCAGGCTCAATCCCACTCCTGACACAATTGTTA Gene GeneID:785881|LOC785881:XM_002695023:287_cdna Constitutive 0 NULL GeneID:785881 18 GENE LOC785881 NULL similar to gene model 1082, (NCBI) EMBV3_26580 ATTGCACCTTTGGACATCGGTGGCGCTGACCTCTTTTTGTATGTGCATTACCGTGTCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42173 ATGTGGCCCTCGCTCTGTCTATGCAGGAGCCCCAAAGCCCGCACTTTGTCCGTGTGTTCT Gene GeneID:512803|SLC30A3:NM_001076843:114_cdna Constitutive 0 NULL GeneID:512803 11 GENE SLC30A3 MGC139533 solute carrier family 30 (zinc transporter), member 3 EMBV3_05410 GAACTTCTTGTGAACCATAACGTCCCCAATGACTAAGGAATCAAAGAGACAGAACCGACG Gene GeneID:536732|ESRRG:XM_002693943:19_cdna Constitutive 0 NULL GeneID:536732 16 GENE ESRRG NULL estrogen-related receptor gamma EMBV3_26714 TGAAAATTCACAGCTTTCCCTTTTGTCCTCAGTGAACCCGCGCCATAGTCCTCTCCACGC Gene GeneID:317721|MFAP3:NM_001166519:17_cdna UTR3_Alt 1 NULL GeneID:317721 7 GENE MFAP3 NULL microfibrillar-associated protein 3 EMBV3_02218 CAGGAAAAAATATATGAAGACAAATCTAAGGTTTCTGTAGCTGGATCCAGCACCGGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35369 TCCTCTCCCGAGTTTTTCATGTGAGTCTGACACGCGACCCCAGCTCGCCACCTTGATAAG Gene GeneID:782481|MAF:NM_001105637:89_cdna Constitutive 0 NULL GeneID:782481 18 GENE MAF C-Maf MGC152027 v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) EMBV3_17460 CCTCTGGTCTCCAGCCTGCACCTTGCCAAAGAGAGCTATGACCTTAGTACTTGGCGAGCA Gene BVV0102_440572 + 0 NULL GK000017.2:18325639-18331271 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074990 TCONS_00074991 TCONS_00074983 1 XLOC_046469 Coding TCONS_00074990 XLOC_046469 Coding Coding MAML3 17:18313711-18327355 j TSS56673 3542 1 TCONS_00074990_2 432 4 0.740672872535366 0.000510777086637678 7.37879607900944e-14 0.000498377212012763 0.000125481791393348 0.000108257109750876 5.60022277087719e-06 6.00033918199126e-23 0.000417482824770466 4.74567797523017e-10 0 1.79362297261395e-41 6.48784441925212e-174 1.45268831949166e-10 4.01984597465765e-60 3.24759802898344e-186 0 0 0 0.000292727502080351 0.000288104465715381 0.000263453050639017 0 0 4.61227188856645e-44 0.000294529222705465 2.22794117078673e-05 0.00056033962202971 0 0 0 XM_003583287.2 MAML3 PREDICTED: Bos taurus mastermind-like 3 (Drosophila) (MAML3), mRNA. 0.0 6161 100.00 0.964144551101073 NM_018717.4 MAML3 Homo sapiens mastermind-like 3 (Drosophila) (MAML3), mRNA. 0.0 1905 82.85 0.524562394127612 TCONS_00074990_2 sp|Q96JK9|MAML3_HUMAN MAML3_HUMAN Mastermind-like protein 3; 0.0 686 87.36 0.997685185185185 0 coding 0 0 0 0 -0.3339860030963 0.231187369860159 0.0191065656969415 0.754233854847544 GCAGCAACATCAGAAACAGACTGGGCCTGGCCTCAGATTTCGCAGAGCCATTACTGGCCCCCTTTAGCCTCTCCAGCCCCACTGTGTTAAAAGATTGGAGGACTGCTGTGTTCTCTTTATGGAAATGAGCAGCACCCAGTGGGGCTTCCCCGGAGCACGGGCCCTATGCAGTCCTCTGTGCCCCCGGGCTCAGGAGGCATGGTCTCCGGACCGGGGCCCGCGGGGCCAGGCTTCCTGGGCAGCCAGCCCCAGACAGTCCTCATGAAGCAGATGCTCATTGACCAGCGGGCCCAGCTGATGGAGCAGCAGAAACAACAGTTCCTGCGGGAGCAGAGGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGATTCTCACAGAGCAGCAGCTGCAGCAGCCACACTTGCCCCGGCAGCACCTGCAGCAGCAGCAGCGGAATCCATACCCAGTGCAGCAGGTCACCCAGTTTCAAGGGTCTCCCCAGGATATAGCAACTGTGAGGAGCCAGGCCGCCCTCCAGAGCATGCGAACTTCACGGCTGATGGCACAGAACGCAGGCATGATGGGAATGGGACCCTCCCAGAACCCAGGGACAATGGCCACAGCAGCCACCCAGTCAGAGATGGGACTGGCCCCTTACAGCAACACACCTACCAGCCAACCGGGAATGTACAACATGAGCACAGGAATGACCCAAGTGTTGCAGCACCCAAACCAAAGCGGTATGAGTATCACACACAACCAAGCCCAGGGGCCGAGGCAGCCCACCTCGGGGCAAGGGGTTGGGATGGTGAGTGGGTTTGGTCAGAGCATGCTGGTGAACTCGCCCATGACCCAGCAGCGCCAGCAGATGAAGGTAGGCCAGTCCTTGCCCAGGCCCCAGGGCCCACCGAGGCTGCAAAGCATCATGGGAACGGTCCCGCAGGGAAGCCAGAGCTGGCAGCAGAGGGGCTTACAGGGGATGCCTGGGAGGACTAGTGGAGAGTTAGCATCATTCAACAATGGCGCCAGCTACCCGCTGCAAGCCGGCCAACCGAGGCTGACCAAGCAGCACTTCCCCCAGGGACTGAGCCAGGTGGTGGATGCGAACACTGGCGGGGTGAGAACACTCAACCCGGCCGCCATGGGTCGGCAGATGATGCCGCCGCTCCCGGGGCAGCAAGGCACCAGCCAGGCCAGGCCCATGGTCATGTCGGGCCTGAACCAGGGCGTTCCCGGCATGCCAGCCTTCAGCCAGCCCCCAGCACAGCAGCCGATGCCCAGTGCCAGCTTTGCCTCCAGCAGCCAGAGCCAAGGCTACGAGCGGAACCCCCCTCAGGACATGTCGTACAATTACAGTGGTGAGACGGCTGGGGCGTCCTTCCCCGGCCTCTCGGACGGTGCCGACCTTGTGGACTCCATCATCAAAGGTGGACCTGGGGACGAGTGGATGCAGGAGCTCGATGAATTGTTTGGAAACCCCTAGTCAGGAGCAGCCCAGGCCACCACAACTCCAGTGGTTTAAAGCTCCAACCATGAAAAAGAAACAGGATGTCACTGCATCCTTGTTTTTTTGTGTTGTTTTTTTGACCCACGTGATCTGAGCAAAGCTGCAGCCAGCTGACTGTGGAAGATCCAGGCACCAATCCACAGCCCCGCCGGGCCCTGTTTCACCTGATTTTCACACAGCAATGGAGACAGACGCCCTGCGGATCCTGCTGCAAGAGAGGGGGACACACCAGAGGTGGGCAGAGAAGATGATTCCGGAGCCCTCAGCTTGGCCCTCCCTGTGATCACCCGGCCCAACAAGAGCCACTCTGGCCAAGACAGACTGCTGCCCAACGTGAGGTGGCCGTCAGTGCTTCCTGGCCTTGGCCCGGATCTACAGCTTTGGAGACCCAGAGGGGAGAGAGCCTGGGGCTGAGAGTCCCACGGAGGCTGCTGGGTGGTGGTGCAGGCCAAGAGCACAGGTCAGATACGTGCTGAACTCTGGCTGCAGAGAGATGTCACAGGAAGACAGGAGACCCTACAGGCCTGTATCCTGCTCACGATGACCTGCAGGAATTTCAGAGCTTGGAGAAGGGTCCTGGCAGTCCTGGGCGGGCAGCCCTCTGCTGATGACCGTGGTGGCTTTTACTCCGGGGAGTTGGCCTGGCGCTTCCTGGGGGCCCGGTACGACCTGATACATCTCAGCCGGTCCCATCTACTCCAGGAGGCCAAGGATGGGGAGGCCCGGGGTGGACGCTGTGTGTGTGTCAGTGCGGCCACCTTCCCCTCAACTGGTCCCTGACCCCGTTCCTCCTCACCTCCGCCCCAGCCTGCCTGTGCTGGTCCTTGCAGACTATCCAAGAAGAAATGAAGCTTTTGTCTTTAGGGAGCCTGCGCAGAGGGAAAATAAGAGCAAGAAGAACTTAGTGCCTGAAATGCAAAGGCCACAGTGGAGTTTTTCTTTCTCTTCCTGGAACCGAGCGGGTTGTTCTGCTGCTTGGTGGTGGGTTTCCATGAGCTGCATCTGATGTTTCTGGGACACTAGGGAGGAGCAGCCTGGACATCACTGGCTCTGGTTCCCTTTGGGAAAATCCCAGGAGTGATGCTCTTAAAGCAGCCTGACCCTTCATCCCTGCTCCCCGGAAAGACAACTCTCAAGTCCTGAAAGCTGAGGAACTGAAAAACCCATTGCTCCACTTCAGCCGTTTTGCTAATGAAAAGAGGGAAGGTATGGTTCCTTTCCTTGGGCAAAGCGATACCCTCTTGAAGTTCTGTACAGTTGTTCTTTGTGTAATTCACGCAGATCTGTCCTAAGTGAAGTCTGTTGGAAGGGATCCACACTCTCTGCTGCTGGAGGGCTGGTCTCATCTGCCCTCCCCTCCCCTCCCACTGGCCTGTTTCGGAGGCCACGGGACATAGCTCTTGTCCTGAGTGAGTGAGCGTGGCATAAGCTTTTCTCCTGCCATCCCTTCCCTCCATGTCCAAAAGGCAGGCTTGCTTCTGTGCACTCACATGTCACTTGCCACACCAGAGCCCCGGCCCAGCCTGGGGAGTCACACTGGGGGCAGGTCCTGGGACTGAAGCGGGTAAAAATGAAGAGCTGGGACAGAGGATGTAGAGAGGCAGCAGGCAGGCAAGCACTGCCCGGGGCCTGCTCGCCAAGTACCAAGGTCATAGCTCTCCTTGGCAAGGTGCAGGCTGGAGACCAGAGGGGGCCACGTGGGTGAGGACCCAGGTCGGGGCTGTGGTCCCTGGGGGAAGAGGTGGTGGCAGGCTGACCATGAACTCCCTGCGTGGGGAGGGCCACCGCCAGGGGAGCTCTCGAATGGAAGCAGATGAAAACCAAAAACAAGGGAAAGTGAAGAAACGAGAAGACACAGAAATATATAATTACCTTTTTCTGAAAGGTACAGGAAATAAATATATAAGCAATGATGAGGAACTGGAGGTGGCTGATGGAGGGGGAGAGGGGGCCTCTGTTCTCTCTTAAACGCTTCCTCCAAATGCTCAATACTGGGACCAACTACATAGAGAGGTAGATTTTAATAAGGTGGCTTCGTTTTGTTTTTTGTTTTT EMBV3_32958 TCTGGTCAAGTAACTGGGGTAGAGTCCACGCAGCTTCAACATAGAGGGAAGCAACACCTG Gene GeneID:788736|LOC788736:XR_083615:408_cdna Constitutive 0 NULL GeneID:788736 3 PSEUDO LOC788736 NULL similar to PAIP1 protein EMBV3_32307 ACGAGTCCCAGCTGCACATGAAAGGGGACCCTCACTACTCCTTCAATCATCCTTTCTCCA Gene GeneID:503579|FOXA1:XM_002696713:116_cdna Constitutive 0 NULL GeneID:503579 21 GENE FOXA1 HNF-3a forkhead box A1 EMBV3_17372 TTTCCAGACAGCAACCACAACTATGCAAGCGAACTTCCGCAAACACCTGCGCATGGTCGG Variant GeneID:615854|NELF:XM_002691691:18_cdna 893^967 2 EMBV3_32774 GeneID:615854 11 GENE NELF NULL nasal embryonic LHRH factor EMBV3_06263 CTACCGGCTGGTCCAGATAGGAGGCAGCAATGCCCAGAGAGATGTCTTCAACCAGTTACT Gene GeneID:616471|TTC38:NM_001105259:56_cdna Constitutive 0 NULL GeneID:616471 5 GENE TTC38 FLJ20699 MGC179473 tetratricopeptide repeat domain 38 EMBV3_08552 TAGCTGACACCAAAATGGTGGAGTACCACGGGCAGCCGAATGTCGAGAGCTACGTGCTGA Gene BVV0102_225209 + 0 NULL GK000021.2:30818861-30865055 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119096 TCONS_00119093 TCONS_00119094 TCONS_00119095 1 XLOC_072813 Coding TCONS_00119095 XLOC_072813 Coding Coding LOC504694 21:30840506-30897543 j TSS89271 4737 2 TCONS_00119095_7 868 24 0.917367978119083 1.43692693680856e-18 3.07550197531669e-21 1.84839728262036e-08 4.59316746051473e-09 3.71895026949881e-77 5.60779014325897e-07 2.19199111185612e-11 9.25452305975476e-07 1.13136366381499e-45 7.77324102864507e-06 3.49660803125131e-07 1.20396524533394e-05 6.66194044030753e-06 3.52254195089396e-140 8.36519441317451e-07 2.92104488446482e-07 0 9.50833962183084e-05 2.36728506057889e-09 9.33069488628686e-52 2.64074487015906e-05 0.00165581128742098 0.000373773779116876 2.97136677280157e-09 2.80111260693936e-06 1.16835635471392e-06 6.31122695420969e-10 3.32093841221598e-09 8.14670959201702e-06 2.68514327785214e-91 XM_003587564.2 ADAMTS7 PREDICTED: Bos taurus ADAM metallopeptidase with thrombospondin type 1 motif, 7 (ADAMTS7), mRNA. 0.0 4556 100.00 0.533037787629301 XM_005254137.1 ADAMTS7 PREDICTED: Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 7 (ADAMTS7), transcript variant X1, mRNA. 0.0 2078 89.98 0.324255858138062 TCONS_00119095_7 sp|Q9UKP4|ATS7_HUMAN ATS7_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 7; 0.0 1316 79.22 0.928571428571429 3 coding 0 0 1 1 0.0322711103354441 0.770911746489789 0.0250933949053757 0.623585567772237 ATGGCTGGCCCACTGGGGCAGTTGTGGGCAGTGAGGGATGTCCTCAGCGGGGGTGCGGGGGGCCACACCATGCAGCGCACTCTTCAAGTGGTTTGGCAGGAGACAGATTGGAGGAAAGGTGTGTTCCAGCTCTCCAACGAGGACTACTTCATTGAGCCCCTGGATGGCGTCCCCGCCCGGCCTGGCCACGCCCAGCCCCACGTGGTATACAAGCGCCAAGTCCCTGAGAAGTGGGCAGAGCCGGGGGACTCCAGGGCTCCAGGCACCTGTGGGGTGAAAGAGTTTCCAGAGCTGGAACCCCAGCGGGAGCGTTGGGAACAGCGGCAACAGTGGCGGCGTCAGCGGCTGAGGCATCGATACCAGCGCTCGGTCAGCAAAGAGAAGTGGGTGGAGACCCTGGTGGTAGCTGACACCAAAATGGTGGAGTACCACGGGCAGCCGAATGTCGAGAGCTACGTGCTGACCATCATGAACATGGTGGCCGGTCTGTTTCATGACCCCAGCATCGGGAATCCCATCCACATCACCATCGTGCGCCTGATCCTGCTGGAAGATGAGGAGGAGGACCTGAAGATCTCTCACCACGCAGACAACACTCTGAGGAGCTTCTGCAAGTGGCAGAAAAGCATCAACATGAAGGGGGATGCCCACCCGCTGCACCATGACACGGCCATTCTGCTCACCAGGTGCTGCCCCGGCAGACCTAGACCTGAGCGGCTTGGAAGAGGCCCGGGGCTGGGAGGGACTTACTCGAGGAACCTGGTGATGTACTCGCGGCTGCAGCGGGACCAGGAGTTTAATGGTGTCATCTCTTATATTTCAGTCTGGCCTGCACTAGATGTTGAGCTCCTCTGCTCTGTGTTTGTCACTGCCCTGTTCAACTGCTCCCTAATTATTGGAGTAGAAGCCAATAATGTTTCTGAGCTGCAGTGCAAGGGCCCCAGAGGACAGGCAGCCCCTTACCCCACACTTCTGTCCCATCTCTGCAGCCGTGGGTGGGGCCTGTGCCTGGATGACTCTCCCAGCAAGGATGTCATCGACTTCCCTTCCATACCGCCTGGCGTCCTCTACGATGTGGGCCACCAGTGCCGCCTCCAGTACGGGGCCTACTCTGCCTTCTGCGATGACATGGACAATGTCTGCCACACACTCTGGTGCTCCGTGGGGACCACCTGTCACTCCAAGCTGGATGCAGCTGTGGACGGTACCAGCTGTGGGGAGAGCAAGTGGTGTCTGAATGGGGAGTGTGTTCCCGTGGGCTTCCGGCCCGAGGCCGTGGATGGTGGCTGGTCTGGCTGGAGCGCCTGGTCCCTCTGCTCGCGGAGCTGTGGCATGGGCGTGCAGAGCGCCGAGCGGCAGTGCACGCAGCCTGCGCCCAAATACAAGGGCAAATACTGCGTGGGTGAGCGGAAGCGCTTCCGCCTGTGCAGCCTGCAGGCCTGCCCCGCCGGCCGCCCCTCCTTCCGCCAAGTCCAGTGCAGCCACTTTGACGCCATGCTCTACAAGGGCCAGCTGCACACGTGGGTTCCTGTGGTCAATGACGTGAACCCCTGTGAGCTGCACTGCCGGCCTTCGAACGAGTACTTTGCTGAGAAGCTGCGGGACGCTGTGGTGGACGGCACCCCCTGCTACCAGGGCCAGGCCAGCCGTGACCTCTGCATCAATGGGATCTGCAAGAATGTGGGCTGTGACTTCGAGATCGACTCGGGTGCCGTCGAAGACCGCTGCGGGGTGTGCCACGGCAACGGCTCCACCTGTCACACCGTGAGCGGGACCTTCGAGGAGGCTGAGGGCCTGGGGTATGTGGACGTGGGGTTGATCCCGGTGGGCGCCCGCGAGATCCGCATCGTGGAGGTGGCGGAGGCCGGCAACTTCCTGGCCCTGCGCAGCGAGGACCCGGATAAGTACTTCCTCAATGGCGGGTGGACCATCCAGTGGAACGGGGACTACGAGGTGGCGGGCACCACCTTCACCTATGCCCGCACAGGCAACTGGGAGAACCTCACGTCCCCTGGCCCCACTGACGAGCCTGTCTGGATCCAGCTCCTGTTCCAGGAGAGCAACCCCGGGGTGCGCTACGAGTACATCATCCACAGGGAGGCGGACGGCCACGACCACATCCAGCCGCCCGAGTTCTCCTGGCGCTATGGACCCTGGTCCAAATGCACTGTCACCTGTGGCACAGGCATGCAGAGGCAGAGTGTGCACTGCACGGAGCGGCAGGCGGGGCCTGTAGACGAGAGGCACTGTGACCCCCTGGACCGGCCGGATGACCGCCAGAGGAAGTGCAGCGAGGAGCCCTGCCCTGCCCGGTGGTGGGCAGGTGAGTGGCAGCTGTGCTCCAGCTCCTGTGGGCCTGGAGGGCTCTCCCGCCGAGCCGTGCTCTGCATCCGCAGCGTGGGGCTGGATGAGCAGCGCGCCCTGGAGCCGCCTGCCTGTGAGCACCTGCCCCAGCCCCCTGCCGAAACCCCCTGCAACCGCGATGTGCCCTGTCCGGCCACCTGGGCTGTGGGGAACTGGTCTGAGCCACCTGGCCCCGCGCCCTCCACTGCCTTCATCACCCGAGCCAGCCGGCATGGGCAATGCCATCGAGGAGGACGGCCATGAGCTGGGCCTGCCAGGGCCCGTGTTCGTCGACGACTTCTACTACGACTACAATTTCATTAACTTCCATGAGGACCTGTCCTATGGGCCCTTCGAAGACCCTGACTCAGAGCCGGTGGGCACAGGGGATTGGAGGCCCCCACCCCCGAGCACTGCTGCTGAGCCCCCCACGGGGACCCCTGTTCTTCCCACAGAGCCTCCTGGGACTCGGGATGAGGGGGCACTGGGAGATGGGTACCCTGCCCCTTGGCCCAGCCAGGCTGGCCCATCCCCACCCCCACCCTCGGAGCAGACCCCTGGGAACTCCCTGGTCAATTTCCTACCTGAGGAAGATGCCCCCATTGGCGCTCCAGACCTTGGGCTCCCCAGCTTGCCTTGGCCCCCCACTTCCATCAGCATGGAGACGCCTGCTGCCCCTGGGAGCCAGAACCAGTTCCTGGGAGCAGAGGACAGCCAGAGCCTACCGCCTGCTCCCCGGTGGGAGAGGACCAATGAGGTTTCTGATGATGAGGAAGCCTTAGGCCGTGGAGCCCCGCTCCCGCCCCAGAGGCCCAGCCCCACGTCACCCTCTCTGTCCTCCGCTGGCACTACCCACTCCTCCCCTAGTCCCCGCACAGTAGAGCTGTGGACGAGTGGGACGGCGGCCTGGGAGCCAGCTCTTGAGGGTAGCCTGGGGCCTCTGGACAGTGAGCTGTGGCCCACCGTGGGAGGCGCCCCTCCACTTCCTCCTCCCACCACTGCCCTGCCAGACACTCAGGGTACGGACAGCCCCCTGGAGCTGGGGACTGCCACCTTCTCAACCCCAGGACCGACTCTGCAGAACCTGCAGACCTTGGCGATGCCAGGAACCTTCCTTCTCATGGCCCCCACTGGCCTGGGGCACATGCCTTGGGTGACTCCCCAGAGCCTGGGCCCCTTGGGCCAGCCTGAGCCCCCCAGCTCCAAGATGCTCCCAAGCCCTGGGCTGCTGTCCACACCAGCTCAGGATAGTCCGGCCAACAGCAGCAGAGCCCCTGGGCCTCTGGACCCCAGCCCGGTCGAGGAGGGGTTCCCTGTGGACCTGCTGCCTGCCAGGAATGCCAGCTGGGAAGTGGGGAACTGGAGCCAGTGCTCCACCACCTGTGGCCTGGGGGCTGTCTGGAGACTCGTGCGCTGCAGCTCTGGCCGGGAGGAGGACTGCGCCCCCGCTGGCCGACCCCAGCCCGCCCGCCGCTGCCACCTGCGGCCCTGTGCTGCCTGGCACATGGGCAACTGGAGTAAGTGCTCCCGCAGCTGCGGCGGGGGCTCCTCCACACGGGACGTGCAGTGTGTGGACACACGGGACCTCCAGCCACTGCGGCCTTTCCACTGCCAACCGGGGCCCACCAAGCCGCCCGCCCGCCGGCCCTGTGGGGCCCAACCCTGCCTCAGCTGGTACACCTCTTCCTGGAGGGAGTGCTCCGAGGCCTGCGGCGGTGGTGAGCAGCAGCGTCTTGTGACCTGCCCGGAGCCAGGCCTCTGTGAGGAGGCGCTGAGACCCAACAGCACGCGGTCCTGCAACACCCACCCCTGCACGCAGTGGGTGGTGGGGCCCTGGGGCCAGTGCTCAGCTCCCTGTGGCGGCGGTGTTCAGCGGCGCCTGGTCAAGTGCGTCAACACCCAGACCGGGCTGCCTGAGGAAGACAGCGATCTGTGCGGCCACGAGGCCTGGCCTGAGAGCTCGCGGCCATGCGGCACCCAGGACTGTGAGCTCACCGAGCCGCCACGCTGCGAGCGCGATCGCCTGTCCTTCGGTTTCTGTGAGACGCTGCGCCTGCTGGGCCGCTGCCAGCTGCCCACCGTCCGCGCCCAGTGCTGCCGCTCCTGTCCCCCGCCCGGTGTCCCCTCCCGCGGCCACCAGAGGGTCGCCCGCCGCTGACCCGCGCCCCGGCCCCCAGCGGCCAGGATGCACAGACAGACTGACGCACGGACCTCAGCGCCCAGCATGGGCTGTGGCGGAGCCCCGCCCCTCAGGCCCTAATGGTGCTAACCGGGGATCCCACCACTGGCAGGCTGGGGACCCCTCCCTCTCAGAAAAGGTATTTTTTTATTCTAACAGTTTGCATAACATTATTATTATTATTATTATTATTATTGTCGTAATAAACAGGCATC EMBV3_35527 CCTCGCGACTCCCCACTGCCCCGTGGCCAGGCGGCCAACATGTCCGGGACGTTTGGAGGA Variant GeneID:282142|ANXA11:NM_174502:236_cdna 94^275 3 EMBV3_23917 GeneID:282142 28 GENE ANXA11 MGC140235 annexin A11 EMBV3_30137 CTGCCAGAGCTAGTCTTCAGCGTTTTAGCCTGGGCTTGCTTTACGTCGGGGCTTTTCGAA Gene GeneID:788635|LOC788635:XM_002698481:539_cdna Constitutive 0 NULL GeneID:788635 26 GENE LOC788635 NULL hypothetical LOC788635 EMBV3_38661 CGGGGGTGCCATCCAGCCCCTGGTTGAGCTCCTGTCCAACCTGTGCCGGAACAAGAACCC Variant GeneID:789280|KPNA7:NM_001163947:353_cdna 620^793 2 EMBV3_02724 GeneID:789280 25 GENE KPNA7 NULL karyopherin alpha 7 (importin alpha 8) EMBV3_39966 AAGGTGACAAACGCACACGGCTTCTAGGCAGTAGCCTGGGTCTTAAAGCAGATGGTCTTT Gene BVT0102_435346 + 1 EMBV3_24221 GK000011.2:103964032-103985233 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25514 TTGAGCACTTCCACATGGAGGCTGGCACAGGACCAAACTCGAGACACGCAACTCATAACA Gene GeneID:327680|NDUFS4:NM_175800:55_cdna Constitutive 1 NULL GeneID:327680 20 GENE NDUFS4 NULL NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) EMBV3_33414 TGAAGACATCATCCCTGCAGTTGAGATCTACTCTCTGTTAGCACTCTGTGCGTGTGCCAG Gene GeneID:100337107|LOC100337107:XM_002691519:531_cdna Constitutive 0 NULL GeneID:100337107 11 GENE LOC100337107 NULL Oseg4-like EMBV3_22845 GGTACTGTGAGCAGCTGAGATAACCTGCGGAACATTGTACAGACCCCGCGCTGCCCTGTA Gene BVV0102_107749 + 0 NULL GK000006.2:108711718-108716996 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30420 GTGGTCGCCTGCTGGCAATGAGAACTTTTAGCACTTACTATCCCAGGAGAACTAACTTCC Gene BVT0102_111157 - 1 EMBV3_43095 GK000004.2:53854750-54085564 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14911 CGGCCCATTTTAGATCCACGACATTATTCTGATCACTGTCCCAATCATACACATTCACCA Gene GeneID:539136|MEGF10:XM_002688976:4_cdna UTR3_Alt 2 NULL GeneID:539136 7 GENE MEGF10 MGC128464 multiple EGF-like-domains 10 EMBV3_41122 CACCGAAGACCCAACGGCTTCTCCACTCAGAGGCCTACCTAAAATACATTGAAGGACTCA Gene GeneID:506557|PB1:XM_002697017:430_cdna UTR3_Alt 2 NULL GeneID:506557 22 GENE PB1 NULL polybromo 1 EMBV3_00357 CATGTTAAACACCTACAGTAGCTCGCTAGAGTACCATCCCCTTTTTAAATTTGTATTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29042 GACAGAATCAACCTCCCTCGAAATATAGTTAAATATGCGCTGTATCACGAATTTCTAAGA Variant GeneID:513231|GTF2B:NM_001046142:135_cdna 475^604 2 EMBV3_06567 GeneID:513231 3 GENE GTF2B MGC137096 general transcription factor IIB EMBV3_43027 GGTTCTGGTCCCAGCTTTGTTACTGACTTCTGGGTGACCTTGGGCTTGTGACTTTCCCTT Gene GeneID:407224|SLC22A7:NM_001101047:231_cdna Constitutive 0 NULL GeneID:407224 23 GENE SLC22A7 oat2 solute carrier family 22 (organic anion transporter), member 7 EMBV3_35253 ATTTGGAGGGGATTCTAGGAAGATGGCAGCTTGAATACGTAGCACATCTCCTCTGTTGTC Gene BVT0102_417563 + 0 NULL GK000029.2:50779537-50807483 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25575 AAGCAGGACTGTGTGCTGTTGCTCAGTACGGTCGTTCTGGGGTTGGAGTTTTCCCCTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09796 CCAGCACTGTGGTACCGCTCCTAGCTCGAACCAAACAGGGAATTTTAGAGAGCGTATGGA Gene GeneID:505981|MRPL9:NM_001035029:55_cdna Constitutive 0 NULL GeneID:505981 3 GENE MRPL9 MGC133921 mitochondrial ribosomal protein L9 EMBV3_34719 AAACAGAACACCGGAGTGTGGCTGGTCAAGAAATCAAGGAAGGACCGAGGTTTCATTTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25572 AGACCTTTTGGCTGCAGTTTCATGTTAGGGTCTTACAGTGTGAATGACGGTGCACAGCTC Gene GeneID:505176|PSMA3:NM_001034235:32_cdna Constitutive 0 NULL GeneID:505176 10 GENE PSMA3 MGC133967 proteasome (prosome, macropain) subunit, alpha type, 3 EMBV3_11954 CGTCACAGCCCGCGTGCCATCAGGACAGGGTCATTGAGAGCGGAGCTGACGCTGTTCTTT Gene BVT0102_200060 + 0 NULL GK000010.2:252419-316695 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15041 GACAGCCTCTCTGGGCTCCACACCCTACAGCTCAGTGCCTCCTTCACCCACCTTCAGTGA Gene GeneID:521544|NRL:XM_002690538:587_cdna Constitutive 0 NULL GeneID:521544 10 GENE NRL NULL neural retina leucine zipper EMBV3_06986 AGGCAAGCCCATGCCAGCTGTGTCCAACGGGACGTTGCCACAATGCAGTTCTGCGCCAAC Variant GeneID:508482|CPNE5:XM_002697207:96_cdna 872^935 1 EMBV3_22742 GeneID:508482 23 GENE CPNE5 NULL copine V EMBV3_07996 GTGGTGGGCACCGTGCAAGGGCCTGTCCCGGTTCCCTGGGTTCAAGGAGGTCCGGCTGGT Variant GeneID:509802|SNRPA:NM_001046039:577_cdna 511^773 2 EMBV3_16198 GeneID:509802 18 GENE SNRPA MGC137110 U1A small nuclear ribonucleoprotein polypeptide A EMBV3_15258 ATGGGAAATGGCTAATCCTGTTAAATACAGAGAGGCACAACACTTGCTGTTGAAGTTCGC Gene GeneID:536153|GPC6:NM_001081730:38_cdna Constitutive 0 NULL GeneID:536153 12 GENE GPC6 NULL glypican 6 EMBV3_01859 AGGCTTTCTGTGCTGGAGGTGATATCAGAGATTCTTGCCAGAAACCATATATTGCACTTA Variant GeneID:535883|HIBCH:NM_001046413:39_cdna 228^308 4 EMBV3_27790 GeneID:535883 2 GENE HIBCH MGC137758 3-hydroxyisobutyryl-Coenzyme A hydrolase EMBV3_21601 CCCAGCCCCTATGTGTAGGGTGTTTGTGGACTTCCTAAGAGTATTTTGAGGCCTGGATGA Gene BVT0102_078485 - 1 EMBV3_38123 GK000005.2:32407691-32450297 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194621 TCONS_00191537 TCONS_00194622 TCONS_00191526 TCONS_00191530 TCONS_00191534 TCONS_00191525 TCONS_00191531 TCONS_00191538 TCONS_00191536 TCONS_00191533 TCONS_00191527 TCONS_00191528 TCONS_00191540 TCONS_00191539 TCONS_00191532 2 XLOC_117808 XLOC_116948 Coding TCONS_00191528 XLOC_116948 Coding Coding SENP1 5:32357472-32412543 j TSS143505 7098 1 TCONS_00191528_6 503 0.0266272189349112 19 0.871454512438714 0.000999986010424937 0.000115424120088219 0.000153114307593468 4.83588504006997e-05 9.40975555525032e-05 1.31813402657589e-05 1.26458934230794e-10 0.000381477563027767 6.00397803326825e-05 2.07320370483148e-05 1.71125297700642e-05 3.25064652325635e-14 4.65489632100112e-05 9.01319335761347e-08 7.8790575203996e-05 1.11608913858908e-17 3.86284890050501e-33 1.81152554243553e-10 6.24085992809268e-12 0.000742910295513929 3.07869113999112e-05 3.76203510184877e-29 2.20969835704554e-14 3.13618612652895e-17 6.74715816042289e-05 0.000383278527339419 3.14110304644615e-17 7.11409013152011e-05 1.30702348972291e-10 5.25521150107586e-05 NM_001206876.1 SENP1 Bos taurus SUMO1/sentrin specific peptidase 1 (SENP1), mRNA. 0.0 3112 100.00 0.242885319808397 NR_051991.1 SENP1 Homo sapiens SUMO1/sentrin specific peptidase 1 (SENP1), transcript 0.0 5530 86.85 0.63454494223725 TCONS_00191528_6 sp|Q9P0U3|SENP1_HUMAN SENP1_HUMAN Sentrin-specific protease 1; 0.0 920 93.04 0.998011928429423 1 coding 1 1 1 1 -0.0017772535019748 0.987704579971358 0.00371862054502953 0.94029072751531 CCCCCCCTCCTCCGCAGCCTCGGAACAGCTCTTCCGGTGTTGTGGAGGCGGTTCCGGTTCGCGGCGGTTCCCGGGTTTTGCGTTCCGCGCCCGGCCGGAAACCCCTTCGCATAGCAGCCGGTTCCGGTTCGGGCTTTGTATCTTTGCTGAAGTCAGTGATGTGAAAACACCTGACATGGATGATATTGCTGATAGGATGAGGATGGATGCTGGAGAAGTAACCTTAGTGAACCACAACTCCATATTCAAAACCCCATCTCCTGTCACAAACAGGTTTTTCAGAGGACCAGCTTTCACTTTCTGACCATCAGATTTTACCTTCCAGGCGAGGAAATTTGGACCGGTCTTACACTTGTTCTACAAGAAGTGCAGCTTATAGTCCAAACTATTTTTCAGGCCCAGGCCTGGGAGTGCTTGCAAGATATAGTTGGGGTAAAATGTTGACTTTTGGTGGACACCACGGAGTCACATTGATGCAGATAAGGCACATGGCTGTGGCAGGATTCAGCTCCTTCATCAATTTTCAGACAACACTTCCTCAGACAGTTTTATTGGCTCAGGAGACCTAAGAACCTTTGGCCAGAGTGCAAATGGCCAGTGGAGAAATTCCACTCCGGTATCAGGTTCAACTTTACAAAAATCAAGAAACAGCCGAAGTCTTTACCTCGAAACCCGAAAGACCTCAAGTGGATTATCAAACAATTTTACAGGAAAGTCAAACCATCACTGCCACATGTCTGCATATGAAAAATCTTTTCCTATTAAGCCTGTTTCAAGTCCATCTTGGAGTGGTGCATGTCGTCGAAATCTTTTGAGCCCCAAGAAAACTCAGAGACGACATATTAGCACAGCAGAAGAGACAGTTCAAGAGGAAGAACGAGAGATTTACAGACAGCTGCTACAGATAGTCACAGGGAAGCAGTTCTCTATAGCCAAACCCACCACACATTTTCCTTTACACCTGTCTCGATGTCTTAGTTCCAGTAAGAATACTTTGAAAGACCCACTGTTTAAAAATGGAAACTCTTGTGCAACTCAGATCATTGGCTCTGATACTTCTTCATCTGGATCTGCCAGCATTTTAACTGCCCAGGAACAGTTGTCCCACAGTGTGTTTTCCTTACCATCTTACACCCCAGATGCTGGTACATTTGGATCCAAAGATTCTGATCCTGTCCATCAACCCGAACATGACCACTCTCTTTCATATCAGGCAGATAACTTACCAGCTTCAAATACAGAATCTGAAGGATCAGACTCTGTGATTTTACTCAAAGTGAAAGACTCCCAGATTCCAACTCCCAGTCCTACTTTTTTCCAGGCAGAGCTGTGGATCAAAGAATTAACTAGTGTTTATGATTCTCGAGCAAGGGAAAGATTGCGCCAGATTGAAGAGCAGAAAGCACTGGCATTACAGCTTCAAAACCAGAGACTGCAGGAACAGGAACATTCAGTACATGATTCAGTAGAACTGCATCTTCGTGTGCCTCTTGAAAAGGAGATCCCGGTCACGATCGCCCAAGAAACAGGGAAAAAAGGTCATAAATTGACTGACAGCGAAGATGAATTTCCTGAAATTACAGAGGAAATGGAGAAAGAAATAAAGAATGTATTTCGTAATGGGAACCAGGATGAAGTTTTGAGTGAAGCATTCCGCTTGACCATTACACGCAAAGATATTCAAACTCTAAATCACCTTAACTGGCTCAACGATGAGATCATCAATTTCTACATGAATATGCTGATGGAGCGAAGTAAAGAGAAGGGATTGCCAAGTGTACATGCATTTAATACCTTTTTTTTCACTAAGTTAAAAACGGCTGGTTATCAAGCAGTGAAACGTTGGACAAAGAAAGTGGATGTCTTTTCTGTTGACATTCTTTTGGTGCCTATTCACCTAGGAGTGCACTGGTGTCTTGCTGTTGTGGACTTTAGAAAGAAGAATATTACCTATTACGACTCTATGGGTGGGATAAACAATGAAGCCTGCAGAATCCTCATGCAATATCTGAAGCAAGAAAGCATTGACAAGAAAAGAAAAGAGTTTGACGCCAATGGCTGGCAGCTCTTCAGCAAGAAAAGCCAGGAAATTCCACAGCAGATGAATGGAAGCGACTGTGGCATGTTTGCCTGCAAATATGCTGACTGTATTACCAAAGACAGACCAATCAACTTCACACAGCAACACATGCCCTACTTCCGGAAGCGGATGGTCTGGGAAATCCTCCACCGAAAGCTCTTGTGAAGACCATCTCAGTTAGCAGACATGGACTTGTTGGGGACCAGCTCTTTGTTGTCTACAGCCAGAGACCTTGGAGACAGCTGCTCCCAACCCTCTCTTCTTGTAAAGTCCTTGATCCTGGACCAGGCCCTGGAGAGATGCACTCACAAGCACATCTGCCTTTCCTTTTGTATCTCAGATACTATTTTTGCAAAGAAACTTTGGTGCTGTGAAAGGGGTGAGGGACATCCCTAATCTGAAGAGAGAGACTGCTTTTTACTTCTTCAGTTCTGCCATCTTGTTTTCAAAGGGCTCCAGCCTCACTCAGTCTCTTAATTAGGGGCCTGAGAGAAGCTTGGAAGGACTCTTGGTTTCGTATAAACTCTTGTTGTTAGGCCTTACTAAGAGGTAGGAATGGATGTGGGTAAAAACGTAGGGATGAAAACCACCAGCATATACACGCACACGTACATACACACAGGATTTTCAAAATGTGTCACCAGGATAGTAGACTGTAAACTGGACTTTGGGGCACCTGCATAAGGCTGTCCTCCAGGACTTGTCCTTTTTACATGCCCCTTGTGAAGTCCATCTGCTTCTGTACAAGGCTGTTTTATCTGTAGCTTCTTCCCCTCCTGAGGCACCACATGTGAGCCCTGGGTGGACCCCAAAGTCCCAGGCAGTCCTTTCCTTAAAAGCAGTGGTTTGCATGTGCTCACAACACATGATATGGGGAAGACCCACCCAGGGAGTGGTTTAGTGGAGTAACAAAGGCGCCACTTTTACTGCTACCTACTTCTGACCAAGAAGAAGAAGGACCTCAGTCTTTAGCATAAAATTCCAGCTTTGGATGAATGCAGGTCTAGTTTGGTCTGTGGCTAGCTAGTTTAAATATGTTTCTAACCACAGAGAATTTAATATATATATATATTTCACAGGGATATGCTTTTTTTTTTTTTTTTTTAAGGCTGAATGTGTTCACCATTTTAGCCTGTAGATTTATTACCATTTTCCAAATTTAGCTCCAGCATACACAGATCCCAGCCCCTATGTGTAGGGTGTTTGTGGACTTCCTAAGAGTATTTTGAGGCCTGGATGAATTTTGGCTTGGGGTAGAGGTTACAGAGGAAGGCAAGATTTTCAAATGGAAAACGGGTGGAATTTGGACTGATCAACTTGAGATTGAAAAACTGCTATTCTTTTTGTTCCTTGTAGCATCTCCCCCACCTTTTGAGCGCTCCTCAGGCTAGATAGTGAAATGATCCAATGCCAGTGTCATTTTGTACCTAAGTTCCAAAATAGGAACATTTTATACTTTTTTCTGTATTGTAATAGGTAGTTTTGTATGAGATCTTTTCTTCTCTTCCCTTGTACCTCATCCTTTCCAACATTGTGCTTTCTCCCTGGGCTTATTTGAAAATTTTACTCTGTTTTATATCAAGCTTGTTTAGTACATTTTTCTATGTGTTACCACAGGTTACAATTTGAAAAGAAAACTATTTTTTTTAAATATTCCATTGTTAACTGAATGTTACTCTTTCCACTCCAGCAACTAGATGTCCTACCTTTTTCATACTGCCTGCCTTTGAGGGGAAGACCACCTTTTGTTTGTTTTCTTTTTTTTTCTTTCTTCATTTTTTTTTCCTCCCTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGGTGTTTTCTGTAGGTAATAAATAGCTTTCTACATATAAGTTGCTGGGACTTTTCACATTCTCTCAGAAAGCTATGGCATGCAGGCTCATTGTGGGACTCCTGTACATTGATTCTTGGTACTTAATGTATTGAAGTGACAACTTGAAAGGTGGCAATATGGTATAGATTTTGGACCATGAATCAAAAGACCTGAGTTTTTCAGGCACATTTGCTATTGTCTGGGGAACTCAGAACAAGATAGTTCTCTGTATTTATTGTTTGTCCATTTAGATAACATCTGTCTTACCTTCTCACAGACTTTTTGTACAGACCAAAGCAACAAATATTTATTGCCATGTATAGCAGAAAATGAAACATGCAACAAAAGCACTTTGAAAAATATATAAGGAATTGTTAAGCCTGTCTGAATTTGGCCCCGCTTTCTGACCAATATAGTTTTATACAAGGTGAAGTTAGTGATCCTGAGACCACCCCATGAGTGGGCCAGGCTGAGACACAGACTGGGTCCAGAGTGGGAACCAGTAGTGGGGGCCATTCTTTCCAGAGAGCTGCCCAAGAAGAGCAGAACTAGCATCTGGAAACTTTCTTCTTCGTTTTAAGGGTGGGCCTTGATGACTGGGGTGGGAGGGTGGAGGAATGTGATGTTCCTGCCTTCCATGGCCAAGGGCATGTTATCAGCATCTTGTTTAACCTGCTTTAAACTAAAGCCTATGACTTTCCTTTTCTCCAGTCTTCCCCTCTCTCCTGTGCCCAGTGCTCATAATTACCTTGTTGTTTGTCATTATTCCCTTGCTGAGTCATGTTCAACTGTGCAACCCCATGGACTGCACAGGCTCCTCTGTCCAGCGGATTTCCCAGGCAAGAATACTGGAGTGGGTTGCCAATTTCCTCCTCCAGGGGATCTTCCCACCCAGGGATTGAACCTGTGTCTTCTGCATTGGCGGGCAGGTTCTTTACCACTGAGCCACCAGGGAAGCCCCATAATTACCTACCTCCTCTAAAAAAAGGAACAGTGATGGATGACAAGCTCTAGATGCCAGATACATAACCTTCAGTAGAAACAGTCTCACCGATCACTCCTGGACCCTTTATGGAGAAAGACCATTCCTGCGCATTTGAGAATGAATACATGGTTCAAGACTAGTTCCATCCCATTTGTCACTGGGCCCCCTGAGACCCACTGTTGCTTCCTGGAGCCCTGTTTAGGGTTGAATGCAAGAGTACTTTGTCATCTGACCTGGCAGCTGTGAAAATTAACTCCTCTGTATATATGAGGTGCTTCATCCTTCTCTGTGGTGTCAACTTCTTTCTTGTTTAGCCCCTGTAATTGCCGTAGCATCTTCTACCCACTACCTCTAATAATATTAGCCCCAAAGTTCTGGGATAGAAACAGGAAACCTGGAAAAGCACTGCCAGCAACTATATTACATAGTCTGTCCATCAGCACCTGGTTTTATGTGGCCCATGAAAGGCTCCAGTGGGTAGTCAAGAGTGTTCACTTCAGAGCCCCAGTGTTTGTAATGTTTCAGCCTCTGGTCCTTCTCCCATGCCATCCCTCCAGCTCTTGAATGTCTTGACCCGGAGTAAGAGACAGCTGATACTTGGGCTTTGTCTTCTCCCTTGTTCCACCTGGATGGGCTAAGGTAGTGGGGGAGGAGAGGGTGGAATATGATGCTTTCATCCTGGGGGCTCACATACCCAAGAGCATCAAAAAAGGATGTGTAAGACTACTGGGCCCTGTTGACAGACTACTGCTGAGCTGGCCAAGTGGCCATATTTCTCTGCCCAGGAAAAATCTCCATAGCTTCAAATTCATCCTAACATTTGGGAAGGGATGAGTAGGGCTCAGCCCAGTATCTTTCCTAACAGCCCAGGCCAATTTTGCCTTGCTGAATTCTAACAGTAGTCTTTTAAGAGCCCATAATTCCTATACCCAGCTGTGGAGGCAGGGAGAGATGTAACATGAGGTGAGTTGGGTCATGCTGGTCAACACTAAGAGAAGGGAGTGCTTAGACATCCATGTGAGAGAGAAATGTGAAACTAAGGGACTTTGAGCTGGAGGATAAGCCTTGAAATGTTTGTGCAGGCTGCTGCTCTGGCCTGTCATAGGTGGGGTAATTCCAACTGGGAGCGGTCGGACCGGATGTCCAGGGTCTTGTCAAGGTCTAAGATTCTTAAATGATATTGAGGCCCATAATGCCAAAGTCAAATTTAAGGCCAGTATTAGCACTGGCTTAATCTTAGAGGTAAGGCCCAGGTCAGTCCTCCCTAATGGGACAGTTTGTAGCTGCTGACTTTTCTCCATTCTAAACTGAGGGGTAACCATCAACCGCTTGACTTCTGGAGAGTCCGGTTCCATCCTCAGAACTTTGGTGCTGGGAAAGGAAAGCGTGTGGTGAGAGGTGCACAGGGAGTCCAGAGCACCCCTTACGAGTTTATACTCACTGTTTCCACACACTCAAAGCGCACACACCCAAAGCCTGCCTCCTTGAAACCTTCCCTGATCACTTTATCTTAAAATCTCTTACCTGGACAGCCACAGCCCTTAGAATCAGCAAACAGTAAAACTCCATGTGGCATGTGTATTGTAATCTGTCCTTTACATCAAATGGCCTGAGAATGTGTAACTGTTGAAGGCAGGTGAATAATTTGATGCTTTTCCTTCAAGCCAGGAGTTCCAGTTGCTTCTCTGGCCTGCTAGGGAGGAGTAGGGGCAACTGACTAAACATTTACTTAGACAACATTGCAGAGTCAGGGAAGAAGGTCCATTCACAGAAGCCTGCAGTGAGGCTGTACCTCTTCTGTGCCCCAAACCTAATGCCTCACTCCACACTTAACAAAACCCACTTCCTCAGCAGTTCAGCATGTCCTTCAGGGTCTCAGTCTCTGCCAGGAAGCTAATCAAGTATTTTTTCCCTAACCACACATCTTTCTATTATATACAGTTTTTCCATCTTTTTATTTCCAGTACATCCATCGTGGACTGTGGATCCCCTCCTGTTAGCCTTGTCCCTTAAATGGACTGTTTCCCATGCTGCCTGTGTCTTGTCTGTTGGCCGGAGCTAAGTTCCTGGAGGGCATCTGCCTCATCCACTTCTGGGGAGCCCCTTATGCTAGGTGTTTAAATAGGCCGGTGTTTAAAGCACTAGGCTTGGGGGGCCCTGAAGCGTGGAGTAAAGAGATGGTTTGACCAA EMBV3_29468 ATGTTCGGCTGCTTGGTGGCGGGCAGGCTGGAGAAGGAAGCCAACACCCGTTTGGAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04608 CTGAGATTCCTTCATGCTGTTATTCAGGGCTAAGTTTGTGGGCTGAGTGCTAACATCTCC Gene BVT0102_213340 + 0 NULL GK000017.2:57422730-57425749 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077535 TCONS_00077562 TCONS_00077547 TCONS_00077549 TCONS_00077550 TCONS_00077534 TCONS_00077556 TCONS_00077558 TCONS_00077539 TCONS_00077555 TCONS_00077541 TCONS_00077564 TCONS_00077543 TCONS_00077536 TCONS_00077563 TCONS_00077557 TCONS_00077548 TCONS_00077544 TCONS_00075635 TCONS_00077554 TCONS_00077551 TCONS_00077537 TCONS_00077545 TCONS_00077559 TCONS_00077553 TCONS_00077552 TCONS_00077538 TCONS_00077542 TCONS_00077560 TCONS_00077546 TCONS_00077540 TCONS_00077561 2 XLOC_047091 XLOC_046628 Coding TCONS_00077534 XLOC_047091 Coding Coding ATXN2 17:57422634-57470388 j TSS57923 6198 1 TCONS_00077534_6 797 0.0135527589545015 18 0.870584047075576 0.000250251097036427 0.000793637908392728 8.0813878361088e-41 7.88604886012667e-74 0.000245465328725872 4.935942838841e-57 0.000247319222498079 0 9.35239842062214e-37 0 8.12656979232436e-54 4.28250065020623e-62 0.000245320736831163 0.000807511423244235 0.000520059130320759 0.000545037343234663 0.000823226903094948 5.69659779919209e-46 1.07493310902302e-28 0.000931798837580628 0.000698678850080204 0.00075041139147107 0.000443661711449835 0.000666683100625945 0.00018751671747336 0.000875798423196468 0.000142859547551137 3.8088475044981e-51 3.84625049938678e-95 1.33577180267062e-59 XM_611789.7 ATXN2 PREDICTED: Bos taurus ataxin 2 (ATXN2), transcript variant X11, 0.0 5534 99.93 0.495643756050339 NM_002973.3 ATXN2 Homo sapiens ataxin 2 (ATXN2), mRNA. 0.0 4852 94.94 0.495643756050339 TCONS_00077534_6 sp|O70305|ATX2_MOUSE ATX2_MOUSE Ataxin-2; 0.0 1386 93.39 0.998745294855709 1 coding 1 0 0 0 -1.07962967391975 0.0397929064826698 0.0927171420809408 0.124720214737308 ACACAACTCAAGGGAAAATAAATATATTCCTCCTGGACAAAGAAATAGAGAAGTCATATCCTGGGGAAGTGGGCGTCAGAATTCACCACGTATGGGCCAGCCTGGATCGGGCTCCATGCCATCAAGATCCACCTCTCACACTTCAGATTTCAACCCGAATTCTGGTTCAGACCAAAGAGTAGTTAATGGAGGTGTTCCCTGGCCATCGCCTTGCCCATCTCCTTCCTCTCGCCCACCTTCTCGCTACCAGTCAGGTCCCAACTCTCTTCCACCTCGGGCAGCCACCCCTACACGGCCGCCCTCCAGGCCCCCCTCGCGGCCATCCAGACCCCCGTCTCACCCCTCTGCTCATGGTTCTCCAGCTCCTGTCTCTACTATGCCTAAACGCATGTCTTCAGAAGGGCCTCCAAGGATGTCCCCAAAGGCCCAGCGACACCCTCGAAATCACAGAGTTTCTGCTGGGAGGGGTTCCATTTCCAGTGGCCTAGAATTTGTATCCCATACCCCACCAAGTGAAGCAGCTGCTCCTCCAACAGCAAGGACCAGTCCTGCAGGGGGCACATGGTCATCCGTGGTCAGCGGAGTTCCAAGATTATCCCCTAAAACTCACAGACCCAGGTCTCCCAGACAGAATAGTATTGGAAATACTCCTAGTGGGCCAGTTCTTGCTTCTCCCCAAGCTGGTATTATCCCAGCTGAAGCTGTTGCTATGCCTGTACCAGCTGCATCTCCTACACCTGCCAGTCCTGCATCCAACAGAGCTGTTACCCCATCTCTTGAGGCTAAAGATTCCAGGCTTCAAGATCAGAGGCAAAACTCTCCTGCAGGGAATAAAGAAAATATGAAGCCCAGTGAGACATCATCCAGCTTCTCAAAAGCTGAAAATAAAGGTATATCACCAATTGTTTCTGAACATAGAAAACAGATTGATGATTTAAAGAAATTTAAGAATGATTTTAGGTTACAGCCAAGTTCTACTTCTGAATCTATGGATCAGCTGCTAAACAAAAATAGAGAGGGAGAAAAATCAAGAGATTTGATCAAAGACAAAATTGAACCAAATGCTAAGGATTCTTTCATTGAAAATAGCAGCAACTGCACCAGTGGCAGCAGCAAGCCGAGCAGCCCCAGCATTTCCCCTTCAGTCCTCAGTAACACGGAGCACAAGAGGGGACCTGAGGTCACATCCCAAGGGGTTCAGACTTCCAGTCCAGGATGTAAACAAGAGAAAGAAGATAAAGAGGAGAAGAAAGACGCAGCTGAGCAAGTGAGGAAATCAACGTTGAATCCCAATGCAAAGGAGTTCAACCCTCGTTCCTTTTCTCAGCCAAAGCCTTCTACCACCCCAACTTCGCCTCGTCCTCAAGCACAACCTAGCCCATCTATGGTGGGTCATCAGCAGCCAACTCCAGTTTATACTCAGCCTGTTTGTTTTGCACCAAATATGATGTATCCGGTCCCTGTGAGCCCGGGCGTGCAACCTCTGTATCCTATACCTATGACGCCCATGCCAGTCAATCAAGCCAAGACATATAGAGCAGTACCAAATATGCCCCAACAACGGCAAGACCAACACCATCAGAGTACCATGATGCACCCAGCCTCAGCAGCAGGCCCACCAATTGTGGCCACCCCACCAGCTTATTCCACACAGTATGTCGCCTACAGTCCTCAGCAGTTTCCAAATCAGCCTCTTGTTCAGCATGTGCCACATTATCAGTCTCAGCATCCTCATGTCTATAGTCCTGTAATACAGGGTAATGCTAGAATGATGGCACCACCAACACATGCCCAGCCTGGTTTAGTGTCCTCTTCAGCGACTCAGTACGGGGCTCATGAGCAGACACATGCGATGTATGCATGTCCCAAATTACCATACAACAAGGAGACAAGCCCTTCTTTCTACTTTGCCATTTCCACTGGCTCCCTTGCTCAGCAGTATGCGCACCCTAATGCCACCCTGCACCCACATACTCCACATCCTCAGCCTTCAGCTACGCCCACCGGACAGCAGCAAAGCCAGCATGGTGGGAGCCATCCTGCGCCCAGTCCTGTTCAGCACCATCAGCACCAGGCCGCTCAGGCTCTCCATCTGGCCAGTCCACAGCAGCAGTCTGCCATTTACCATGCGGGGCTTGCGCCAACCCCACCTTCCATGACACCTGCCTCCAATACACAGTCTCCACAGAATAGTTTCCCAGCAGCACAGCAGACCGTCTTTACCATTCATCCTTCTCATGTTCAGCCGGCTTACACCAATCCACCCCACATGGCCCATGTACCTCAGGCTCATGTACAGTCAGGAATGGTTCCTTCTCATCCAACTGCCCATGCGCCAATGATGCTAATGACGACACAGCCACCCGGCGGTCCCCAGGCCGCCCTCGCTCAAAGTGCACTACAGCCCATTCCAGTCTCGACAACAGCGCATTTCCCTTATATGACGCACCCTTCAGTACAAGCCCACCACCAACAGCAGTTGTAAGGCTGCCCTGGAGGAACCGAAAGGCCAAATTCCCTCCTCCCTTCTACTGCTTCTACCAACTGGAAGCACAGAAAACTAGAATTTCATTATTTTGTTTTGAAAAAATATATGTTGATTTCTTGTAACATCCAATAGGAATGCTAACAGTTCACTTGCAGTGGAAGATATTTGGACCGAGTAGAGGCATTTAGGAACTTGTGGGCTGTTCCATAATTCCATATGCTGTTTCCAAGTCCCGCAAGTACCCCAGCTCTGCTTGCTGAAACTGGAAGTTATTTATTTTTTAATGACCCTTGAAAGTCATGAACAACACATCAGCTAGCAAAAGAAGTAACAAGAGTGATTCTTGCTGCTATTACCGCTAAAAAAAAAAAAAATCAAGACTTGGAACACCCTTTTACTAAACTTGACAAAGGTTCAGTAAATTCTTACCGTCAAACTGACGGATTATTATTTATAAATCAAGTTTGATGAAGTAATCACTGTCTGCAGTGGTTCAACTTTTAAGTTAAGGGAAAAACTTTTACTTTGTAGATAATATAAAATAAAAACTTAAAAAAAATTAAAAAATAAAAAAAGTTTTAAAAACTGATACCAAGTTAATGTGTGTTTGTATGAGCTATTTCCATTATAGGATACTGAGTATCAGGGCAGGAGGGCTGACTGCTTTCTTAATACCCTTGAAGGTTAGCTGTCAAATGATTTTTCTTCTTCACCTTTAGTTCTGGTTCAAGGTATCTCTAGAAAAAAGACAAGACTGAGAGATGTTCTCTGTGGTGGCTAGAGGTCTGCTTCAGAAGGAGGAAGGCTGGCCAGAGTTGGGCAGCACCGAAGGTCCCCGTCCTCAGCCTGACGTTGATTCTGTAAGCTTCCTTTTTAATATCTCCGGAACCCAGATAAGTCAGAGGTTGTCCTGATTCAGGCATCTGTGTTTTACCAGTAGGGGGCAGGAGACACACACTCACAGTTGTAATAAAGGAATCCAGAGGGCTGAAAGGATGCAGCAATGCACAAGATAAACCCTAAGCATTTGTTAGGTGTCTTGGTTTTGTGGGAGGAGGATAAACTGGAAAAATACCTATTTTTCAGAGAGTATAGTCATAATAGAACCTTTAAATACTGCAGTTAACTAATCAAGATTCCAAAACCTTTGTTTTAATTCACATGTAGCAATTTGTACATTATAGCAAAATTTGTATTCAAGAATAAGTTACTTATACAGTACATAAACAATACATAAAAATTTGCCAAATAGACCTTCTGCCTATAATGATACAAGATGAATCCATTCTGTGTTGTCATCACAATGTGCTGTTTATTCCAGCTAAACACTGGGTGTCAGATGTGTCCTTGTTAAGAGGCAGTGGATAATCAACCATCAAGTTCCTCTAGCTTGTAGGAGATGTTAGCACTCAGCCCACAAACTTAGCCCTGAATAACAGCATGAAGGAATCTCAGGCAACCCTTAGGGAAGAGTTCAAGGCCTTGATTTTAGGTTAAGAAACTGTTATGTAAAAATAGTGTTCTCTGGCTTAAGATTTTAATGATTTGCTATTCCTTTTTCCTACACGGTCCAGAAATGATCAAAGGCAGAAGATTTATGCCAGATAAAGCCATATGGATTGCTGGTCTAAAATTCAAGGCAGGTTAGTTGACTTAATTCTTTGGTGCTGGTGACTGTTAGTTTGTAAAAGTTCATTAACGTCAGGTAAAGGAAGTGATGGTGCTGGGAGCAGTCAGGCCATCCTTGTCATCATCTGTCATTAGAGATAACCAAAAGGCTGGTGATAACTCAGTGTCCGTTTGGCACTCAGAGCCTGGCTCTCAGCAGAGGCTGCCGGCGTGGTCTCTTGCCGGCAGCAGTGGTCACATTGGGGCTGGAAAGAGGGTGGTGGAACGTGCTCTGACTGCGGTGGGCTGGCTGCAGCTATCAAGGTTGCTGCCTCACTGCCTGTGAGGGCAGCACGCCCTGGGCCCCACTGCTCCCCCTTTCTCCAGCTCAACCTGCTCTAGCAGAAAGGAAAGGCATTGGCTTAGTGTCACTTCTTCCTAGGCCACAAGGGGCCTTTTTGTTGGAATGTATTTGAACTGTCCGGGTAACTCAGACACATTTAGTCAAGAAATGTTTTTCTTGAACACTTTACACTGAAGCTGTCTGGAAGTGGGTGACTATGTCACGGATTCTCAGCTTGTACTTTGCAGCCAGTCAGTCAGAGCTGTGAGCTTGCTGGGCCTGGCTAGCCTCTTGGCACTACCTGAGACTTGTATGTTGAGAGGCTGTTAGGAAATGAGTGCCCCAGGCTTATAGGTGTCATACTACGTTTACCCTCCTGGTCTGCGCTTTGCTTAGCATTCATTACTCAGTAATGCTTGATGTGTAGAAAATGTGGCCCTTAGAAATGGACCACAACCATAGATCAGGGTTGGATATGCATTACCATCTGTGAAACCACCCAGGAGTGTTAGTTTTATATACATTTTTTGAGGGATCTTAGTTCCCTAACAAGAGATTGAACCCGTGCACCCAGCAGTGGAAGTCCAGAGTCCTAACCACTGGACTGCCAGGAGTGTTGGTTTTAAAAGTAGTGAAGTGAGGTGGCTGCTTACCTCCCTGCCCCTCCTAAAGTCTGACCTCCTGGAGTACAGAGAATGGCTGGAACAGACACACCCCTCACCCCAGATAAGGCAGGCAGTAGTCAGTCTAGGCCAAGGTTTAATTTTAGCCTTTGATTGATATATCTGTAAATGTTAAGCTGTGCTAATAAAACTCCCAGTTTCCTAGAAGCCACTTGGGTGAGCCTGGCAGCTATACTGAAGGGCTCTGCTGGCACCAGAAGCAGCTGACTCGCTGGGTCACTGCCTCCCTTGTTTCTGAGCCTCTGCATGAAAGTTGTGGGAGGAGCTAGCCCCCTATGAATTGTGTCACTTGTGAAAGGCAAGTACAGATGGAGATTCGACTGCAGGACCTCTGGGGATGGTAGAGGTTATGGGTGCCTGTGTATCCATGCACACATAGTCTTAGATGAAGCAGTGGTCACTGCTGGAACAGAACACCGATTGTGGGCTATTAAAGGAGTTTCTCATTAGCTGTGGCACCAGCTTCCTAGCTTCCATTTTGGCTTAAGAATGAGCCTAAAACCTTGTAGAATAATTTAGTAAGCCTTTAGAGGCTTGGAGGCTCTAAGCCAGCCCTGTTGGTGAAAGATTTACTAGAAAGGGCCCAGCAGCCCTTTTCTTCCTTGCCCCTCCCTCGCCTCAGTTTAACTCTCACCATAAAGCTACTGTAAACCAGAATTCAGTTTTTTTCATAAGGCACCAGGGTGGAACTGTTCCTGGCCACCCTCCTCTTTCAATAATTGCTTGGAATTTCCTTGAAAGAGTGACACACTTCAGTTCTCTACATTTAGGAAGGACAGTGTCTCCTCAGCAACAGGTGACTGTCCTGACAATGTAACAGACAAGGAAGCCAGGCATACTGGCTTGAACCAGGAACCTGGTCAGTAGGTTTGCATAGCTGTCTCTGACTATAAAAATTGCATGGGTATTAAACAGTGCAATGAAATAAGCAATGGTTTAATTTTGAAACCTGATTTCTTTGAAAAATTAATCTGAGGTAAAAATGTTTAAAATCATTTTTGACCTTTAGCTTGTCCATCTGCCAGAACTTTTGTCCTAAAGCTGAAAGTTGAAGCAGGATAGGTGTGGTCACCTGT EMBV3_23858 AGCAAGGCACCATGACCTGCCGAGTCTGACACTGCTTGGGCAGATACCAGCGAGCTCTCA Gene GeneID:617563|LOC617563:XM_002692683:66_cdna Constitutive 0 NULL GeneID:617563 14 GENE LOC617563 NULL similar to hypothetical class II basic helix-loop-helix protein EMBV3_25706 TTTGCTGATAGATAATGAACTGTAACTGGCGTGGGAAACACTGCTCCTGGCTTGATTCCA Gene BVV0101_064359 - 1 EMBV3_02950 GK000020.2:56022294-56295178 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29559 AGGCTACCCTGCTTATATACTGGAGAAATCACAACTGCATGCTGGGGCCGAGGGGAATGT Gene GeneID:613999|MGC137099:NM_001046523:5_cdna Constitutive 0 NULL GeneID:613999 7 GENE MGC137099 NULL hepatitis A virus cellular receptor 1 N-terminal domain containing protein EMBV3_26641 GAGTTGGGACAGAGCTGGAGCCCCCGCAGGGGAGCTCCTCCGATGGGCCTCCTCACTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01949 AGCTCACCAGTGAAGCAGACACACTGACCCTTGTCACCGCCGACCACTCTCATGTCTTCA Gene GeneID:528262|LOC528262:XM_002685602:234_cdna Constitutive 0 NULL GeneID:528262 2 GENE LOC528262 NULL intestinal alkaline phosphatase VI EMBV3_30665 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10517 TCTGCCCCCAGCCCGACTGTTGTCAAGACACCCCCACTCAGTAATTAAACGAATTGGCAT Gene GeneID:616898|LOC616898:XR_082722:572_cdna Constitutive 0 NULL GeneID:616898 25 GENE LOC616898 NULL hypothetical protein LOC616898 EMBV3_03768 TGGGACTTTCCATTTCCACGATCCGCCTCCGCCCTACACCGCATACAAGTACCCGGACAT Gene GeneID:767971|DGCR2:NM_001077036:136_cdna Constitutive 0 NULL GeneID:767971 17 GENE DGCR2 MGC134284 DiGeorge syndrome critical region gene 2 EMBV3_14659 AGAGAGAGGTGTAGTGGACACAAGCTGTAATATTCAGCAAACCTTTGTCAGTTGGCACTG Gene GeneID:536537|RQCD1:NM_001101167:107_cdna Constitutive 4 NULL GeneID:536537 2 GENE RQCD1 NULL RCD1 required for cell differentiation1 homolog (S. pombe) EMBV3_24083 CATCTGCAGGGACACTGGGTGTTATTGGCAGTGACTGTTCTATATTGAGGCTTTGTTTGG Gene BVT0102_184240 + 0 NULL GK000001.2:86672083-86678921 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004441 TCONS_00004442 TCONS_00004447 TCONS_00004440 TCONS_00004446 TCONS_00004443 TCONS_00004439 TCONS_00004444 TCONS_00004445 1 XLOC_001042 Coding TCONS_00004439 XLOC_001042 Coding Coding FXR1 1:86678163-86691322 j TSS2221 1578 2 TCONS_00004439_1 89 4 0.880376956984344 0.0030346196219637 0.00396961174174102 0.00494731876073448 0.00432015498784117 0.00568634428630594 0.00516905534905251 0.00333349407538316 0.00403423770281911 0.00904470798608838 0.00240733458198336 0.000764965671705651 0.000414413783315733 0.000710883435819064 0.00454609167797044 0.00184900439776966 0.051407687003392 0.0229852065565423 0.0217218571346354 0.00592687138833741 0.00136171288179511 0.00179520468609557 0.015465254310003 0.00909221959790369 0.0210108594707816 0.00500634984081306 0.00387737963016194 0.00119803253036326 0.00215457056340244 0.00306914063292039 0.00336976182198343 XM_005201603.1 FXR1 PREDICTED: Bos taurus fragile X mental retardation, autosomal homolog 1 (FXR1), transcript variant X4, mRNA. 0.0 1487 100.00 0.521546261089987 NM_001013438.2 FXR1 Homo sapiens fragile X mental retardation, autosomal homolog 1 (FXR1), transcript variant 2, mRNA. 0.0 2381 93.51 0.99873257287706 0 coding 0 0 0 0 -1.94326206324344 0.00373134530064901 0.429256162555529 0.000731124487681182 ATCTGAGCTGTCTAACCCATCCGAAACTGAATCTGAACGTAAAGATGAGCTGAGTGATTGGTCTCTGGCGGGAGAAGATGATCGAGAGAGTCGGCATCAGCGTGACAGCAGGAGACGCCCAGGAGGAAGAGGCAGAAGTGTTTCAGGGGGTCGAGGTCGTGGTGGACCACGTGGTGGCAAATCTTCCATCAGTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTACTTGATAATACAGAATCAGATCAGACTGCAGACACTGATGCCAGCGAATCTCATCACAGTACTAACCGTCGTAGGCGGTCTCGTAGACGAAGGACTGATGAAGATGCTGTTCTGATGGATGGGATGACTGAATCCGATACAGCTTCAGTTAATGAAAATGGGCTAGGCAAAAGATGTGATTGAAGAGCATGGTCCTTCAGAAAAGGCAATAAATGGCCCAACTAGTGCTTCTGGCGATGAAATTTCTAAGCTACAGCGTACTCCAGGAGAAGAAAAGATTAATACCTTAAAAGAAGAAAATACTCAAGACGCAGCAGTCCTGAATGGTGTTTCATAAACTGAAGAAGTTCCTAGTTTACAGTTCTTTTACATTACATTTTACAATAGTGCTTGTACAAGCTTGCCAAAGATAGAATATGGATCGCCAGTCTTTCCATCGCACTTTCAGTTCCTCCATTTGGAATTCAGAAAGGGGAGGGATCCTGAAGAAATCATATGTTAAACATACTTTGACACCTACTGTGTTATATATCATCAGATGTGCCTTGAGAATAGTATATGTAACATTAAAAAAAGTTGCTGGCTATAGGAAATGTTATTTTGTTTTCAAAATATGGCAGAGATTGGGGGGGGAGGTGGGTGGGGTGGGATCCCTAACCTAATATTCTTTATGAAAGCATTAGCTGCTTTTGTTACATTTTTAATAATATGCAACCACTTCTTCACCTGAGGAAAACTAGAATGAAATGCAGTCTAAGATATTTTGCACTGAATTGTAATTTCTTCATTAGTTTTAGTCTGGAAACTGGTCTGTTTTAATGTGTTTTTAAAATGCTGTATTGTAGAGGAAAATCTGCAGACCACTGGAATACATTTGTTAAACACTCATCTGCAGGGACACTGGGTGTTATTGGCAGTGACTGTTCTACATTGAGGCTTTGTTTGGTTTATTTATTAAAGTGTACAGTATTTAAAAAATCAAACATAGCTTTAGTTAAAACACTAAGCTGAATTAGTCATGTCCATTCAGACATAACCTGAACTACTGAAAAGATCAATTTCCAGAAGGTTTATTCTGTATAAACTACATGTTAGTCTTCAGTAGAGTATCTTTTCTTCTTTCTCCCTTTTTTCTTTTTTTTTTTTTTCTCTTTTTTTTTTTTTCTTTTTGGTTTTGATTGTTTGATGTGCAATATGTTTTTGTATGCAGGTAGTAAATAAACTTTTGATCTTCCATTTGCTGATTTTTAACTTTCTACTTTTTAAACCAACTGTTGAAAAGTAGTTGGACCTACCTAAAGGCCTAGAGTAGTATTCTGATTGCTTTTTAAGATGCATTTATACTT EMBV3_08657 AACAGCCCCAACTTCCCCAACCTGACTTCACCCCTGCCCTTCTTGACCAGTGTGATTAAA Gene GeneID:506413|C1QTNF6:NM_001101872:176_cdna Constitutive 0 NULL GeneID:506413 5 GENE C1QTNF6 MGC148634 C1q and tumor necrosis factor related protein 6 EMBV3_36509 GTTAACCTTAATGGTGCTGTACACCATCCAAAGACAATGTCCTTATGTTGTCCCGCCTTC Gene BVV0102_073362 + 0 NULL GK000010.2:67171870-67176764 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017667 TCONS_00017666 1 XLOC_009080 Coding TCONS_00017667 XLOC_009080 Coding Coding CNIH 10:67173013-67191789 = TSS12030 5494 1 TCONS_00017667_2 144 0.082089552238806 5 0.707643142476698 0.0002590897900771 0.000228766381778916 0.000197539214831973 5.21364644275892e-05 0.000181952820591629 4.72453882314048e-05 0.000212092614599394 0.00011359915252411 0.000550494136333768 6.42381494351642e-05 2.37168635668221e-05 0.00028672376405929 1.31036090796246e-05 1.80962154539246e-10 6.42940717694464e-05 0.0027627069572799 0.000830308478846239 0.00138064543387712 0.000231356396346446 0.000121871542353101 1.13849662367537e-05 0.00111137992278148 0.00131475154530059 0.000953502331715571 0.000160797424340817 0.000114979610051603 0.000308914683635315 0.000235834346375547 0.000180056869287263 0.000363401085127192 NM_001034739.2 CNIH Bos taurus cornichon homolog (Drosophila) (CNIH), mRNA. 0.0 2857 100.00 0.288132508190754 XR_245653.1 CNIH PREDICTED: Homo sapiens cornichon homolog (Drosophila) (CNIH), 0.0 2753 77.43 0.637422642883145 TCONS_00017667_2 sp|Q5BIN6|CNIH_BOVIN CNIH_BOVIN Protein cornichon homolog; 2e-102 294 100.00 0.993055555555556 1 coding 0 0 0 0 -0.44482817049834 0.413463703417391 0.000395066390151716 0.996411800288329 GAGGGCGCCTTGCACCGGGACCGGTACGCAGGCGCGTTGGGAGGGCAGGCGCCGCGGCAGCAAGCGGCTGTGTGGGCTGTGGCCGCGGGAAGTGAATGGTTTTACCCAGAGGGCCCTGCGCGGCCTTTCTCCGCTGGCACCAGCGCTGCTCCCTTTCCCCCGGCCATGGCGTTCACGTTCGCGGCCTTCTGCTATATGCTGGCGCTGCTGCTCACCGCCGCGCTCATCTTCTTCGCCATTTGGCACATTATAGCATTCGATGAGCTGAAGACTGATTACAAGAATCCTATAGACCAGTGTAATACCCTGAATCCTCTTGTCCTTCCAGAGTACCTCATCCACGCTTTCTTCTGTGTCATGTTTCTTTGTGCAGCAGAGTGGCTTACACTGGGTCTCAATATGCCCCTCCTGGCATATCATATTTGGAGGTATATGAGTAGACCAGTGATGAGTGGACCAGGACTCTACGATCCTACAACCATCATGAATGCAGATATTCTAGCATATTGTCAGAAAGAAGGATGGTGCAAATTAGCTTTTTATCTTCTAGCATTTTTTTACTACCTATATGGCATGATTTATGTTTTGGTGAGCTCTTAGAACAACGCTTAGAAGAATTGGTCCAGTTAAGTGCATGCAAAAAGCCACCAACGAAGGGATTCTATCCAGCAAGATCCTGTTTCCAAGAGTAGCCTATGGAATCTGATCAGTTACTTAAAAAATGACTCCTTATTTTTTAAATGTTTCCACATTTTTTGCTTGTGGAAAGACTGTTTTCATATGTTATACTTGGATAAAGAATTTAAATGGAATTACGTATAAATTAATATAAAATGATACCTCTGGTGTTGACAGGTTTGAACTTGCACTCCTTAAGGAACAGCCATAATCCCTTGAATGATTGATTGCATTAATTATTGACTGTCCTTAGTCCATTGGAAGCTTTCGTTTATAGGAACTTGTAGGGCTCATTTTGGTTTTATTGAAATGCCATTTAATTATAAATTAGCTGTAGATATCAGGTGCTTCTGATGAACTGAAAATATGTATCTGACCTGTGGGAAACTTCATGGGTTTCCTTATCTATCATGTAGGTGATTATATATGGATGCATTAAAAAAATGAGTGGGATTTTTTTCCCCTTGGACTTGAAATACTATCCCTGTATATTGCATGAATGAGAGACTTCCCCGTATTTCCACCAGAGTAATATACTTGCTTTAATTCTTAAGCATAAGTGAACATGATATAAAAATATACGCTGACTTACTTGTGAAGAATGCATTTAAAGCTATTTTAAATGTTTTAATTTGTGAGACTTTACTTATTAAGAAATTGGTTACTAAATGTTCTAATCTGGTGGTAAAGGTATTCTTAAGAATTTGCAAGTACTTCAGATTTTCAAAACCAAATGAGAGAGAACATTGTATAACCATCCTGCTGTTCCTTTAGTGCAATACAATAAAACTCTGAAATTAAGACTTACTTTCAGTGCATTGTTTTAAAGATTATAAATAGCTATTTCTTAAACTTGCTTATTCCAAATAAAGACATATCACTGTCAGTTTTTTAAGGAGATAGTAGAGTATTACTTTTTTGTTTTTTAATACCATGCTTGGATCTAAAAAGGACAGTTTTTAAATGGTTAAGTACATTACCGTCTGTTGTCACTTGACAAGATTCATAAACACTGATGGCATAGCATCATCATTTTTCTAATTAAAGTTATTGTGAAACTTAAAAGGTTTAAAGTATTTTTTTCCTTTTTGAAACAGCAGGTTTTTAAGGTGAAATGAGTTATACATTTGTGTTTTTTTTTTTTGCTGCTGCTTGAAAGGCAGGTGATTTATGGCTTGCATGTTTTCATAAGCATTCTTGTGGTTTATTTGAGAGGGCTAAGTTAAGGCAATTGAAAATAGGATAAGTGGTTCAAAGTTTCTTAAAGGATCAAGGAAGAAAATCATATGTAGAAATTCCACATAATGACCAAGGGGATTTATGGATGTGTTTGTGCAAGTCTTATTCTAAGTAGCCCTTGAATTAGATGCTGTTTTATGCTCTACTAGTGAAGAAACGCTTCCCCACCTTTGGGAGAAGGTTACTATTTTGAGATTGGGCCATAGGAGTAAATACATTGAAGAAGAGGATATAGAACCAGAGAGTGAGGAGAGTCAAACCATTTCATAATGAGAGATGCTTAAAGACCTTGCATTTTGTAGTCTGGAGCACACCTCAAGGGATCTGACTGTTCATTAGTTCATGCAGTAAATTGTTTATTGAGTCCTAGTTAGGCACTGTAGACTCGTGATCTGAGTATAAGCAACCATTCAGCTTCTAATCCACCCAATTGTACTGGCATGCACTCATTTTTCTTTCTTGTTCACAAGAACTTTTTATCATGAGAGACTTTCAGATAAGTTTTCTGGGGTAGTTACTTTTGTATTCCCGTTAAAGTATTTTCATGAGCCCTTCCTGTCTGTTAGCAAACACCACATTCCTTTTTGAATTTTAACAAACATCCTTTTAATAATTATTTCACAGTATTCTCCAGGATTAATGCCAGGTTTATTGGTTGGTGATTCGTGGAAGCCACCTTCACATGTTTCAAAAGTTAGATATGTAGTCCTTAGCTGATACCTCAAGGATGATTGACAGTCAGTGGTAGGTTGTTAGGTCCTAGGCATGTAGATAATTAGAATATTGGGTACCTGGATGCTCTCAAAATATCTGCTCTTTACCTTCACCAGTGTTTTAAGAAAGTAAGTCACTTACCAAGAAAAAGCAGAAACTATTTGCATTTGACAGTATGCCAGTGGTTCTTTTCTTTGCTCTAAATTTAATTTGTTCCCCTGTTAATCTGGTTTGGGTGGTCCTAGCCGTATTTCTATTATTTCTGCATGTCCAGCTGAAACATAGTCTGGGTTCATAATCCTATCTAGCTTTAGTCAAGACTGTACCCTGTGCAGCCACAGCTGTTTATTTAGGAATTCTTTTTTCCCTTGTTACGGTTACTTTTGCTGTTGTGTTTTAAGAGCTTTCTAACTCTGAAATCATTCCTGTAACTTACTGTGGTTTTTATCTGTATCAGCAACTTGCTATTGGTAATACAGATTGCCCTGTATTAAAAATATTATGTAACAAATGTAGTCTATTTAGCAGTTATTCTATTGAGTAATAATACTGTATCATGGCAATATGTCCTGTAGTGCTAAGGAGGTTTAGGGGTAGATTCTCGAATGCCTGAGCCTGAATTTTATTAATATTATTTGATAATTTTCACAATATTTAACTGATACTCCCCACACCCCATCCCAGGGTAGAGGAGAGTTGGGTCACAGGCTGCACATAAACTATTAATTTGTTTGAATTACTTTTCATGGGAGGAGGGTAGTGACAGGAAATGACCAGATAATCCACTTTCGATGTGTATCAGATAGTACTAAAGCGTTTGAGAAGCCTCATACCATGAATGGTCAGACCTATAGTCAAGTTCAGATACCCAGGTAATAGTCTCGCACAGAGCAACAGAATGCATGGCAGTTTGCAGTGTGTGTCTTTTAAAGCCTCTTCAGTATTTTTGGCTTGAGGACCACTTATGCTAATAATGTTCATAGAGCTCTCTGCAGATAACATATTTTGAAAATATGTAAGATAATTGCATAGAAAGGAAATAGAGATGTAGATACAATTTGAAACTAGCAAATTATTTTCCTTGCTACAACACTTCTCTTTTCCTCCAATATATATTTACAGACAGCATTCATGGAATATTACTGTCATAGTACAAAGAATGACTTTTGTGGATTTTTTCTTATCTCTGCAGGAGGGCCAGCTTTCATTTTGGGTGTGGCCATGTCACACAGCAGTGTGATAATATCAAGTCCGTTAAAATGATTTATATTTGAAAGTACATATCTAATTTACTTACTTAAAGCTCAGTTGGTAAAGAATCTGCCTGAATGCAGGAGACCCGGGTTTGATCCCAGGGTTAGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGTCTGGAGAATTCCAGGGACAGAGGAGCCTGGTGGGCTACAGTCCATGGGATCACAAAGAGTCAGACACGACTCACTTTCACTTTTACCACTCACAAATGTGCATTTGTTGATAATCACTTGTATAACTGTACATCAGAAGTTTTGACAGCCAAAATATTTGAAACAACACTTCTCAAAGGGGACAGATAGAAATACTGATACCTTGTCTAGCATTGTTCATGTAACTATGTAGTCATTGTTTTAGGAAACTATTGATAATGTTAATCTCATAATTTAAGCTCTTTTGCTCAAAGCAGGCATTGATCTGTGATCAGACCAGTAGCTAATTAGTCTCTGGCACTAGTATTACAGCTCAGCAGATAATTCTGAACTAATACTGCAGGGCGATGCCGAGAGAAAATGGGGTTCTCTTTCGGGATATGTTGAATAGCTTTCTTGGAACAATTTTGCTTTGATTAAAATTAATGGTTTTAAAGCTAAATGTCTTAAAAAGAGTAAACAACTCTGCTGCTTGTTCTGCTTGGTTTTGGAAAACAGTATTAACCATTAAGGTGATCTGTGGGATTGGAGTGAAGGTTTTACCCTACATTAGTTTTATTAATGTATATTGTGGAAGATGTAGAGAACATCTTGACATAGAAAAGAATGAATAAGTTAACTTATCGTACAGTGCTTTTCCTGAACATTTACATTTCTTTGTTTACAATGTTCTTGTATTATGGAGAAGAAAAATTTCTTAAATAATAAATTGATGACTAGATAGATCTTAAAACTACTAAGGGAAACACAGAATGTAGTTAGCTATCTGTGATCATGGTTTCTTAAAATCAAAGTTAACCTTAATGGTGCTGTACACCATCCAAAGACAATGTCCTTATGTTGTCCCGCCTTCTTTGAGCTTGCTTGCTTTATTTTGCTTTTGTATATTTAATAAAAACTGTCTCAAATGTTTCCTTGTGTAGTTTGTGGATAACGGTTGAGTTTTGTGTGTTGATTCTATTTCGGCAACTAACTGGCTTGTGTATGACCAGGATTCCAGTAGGTCTCTCTGCCTCCCTTCCCTCATTGTTTTGAGGGCTGTCCTGTAGATTAACCAGAGAAAATTCTTTTTCAAGAATGTTGGAATTACATGTTATTAAACTTTATTGGATAATTATATTTGAATAGTGACATCCCATGTTTGTTATGGAATAATTGATGTTTTTCCTTATACTTAGTAAAATAGTCAAGCATTTTATTGTGGAAGGCTTAACTAGCACTTCTTGGCAGTGGAAATTGAGATGCATGTACTTTGAAAATTCAACTGATTAAAGGATTTGATTAGTCCATGCTAATATTTTTTTCTGCTATTTTTAGATATTTATGAGTAACCTATATATTGGGAGAAAGCTGATAATAAGATTTGGTAATGTCAATTTCAGTGACTGTTTAAAGCTTAATGTAGTGATTTTAAAT EMBV3_07715 AGGTGTGCCGGCCTGCTCCTGGAATTTAAGAGTTTCTCAGTTACCTGAATATTGGCTGTG Variant GeneID:529157|ZNF215:NM_001076882:2_cdna 62^234 1 EMBV3_11543 GeneID:529157 15 GENE ZNF215 MGC142562 zinc finger protein 215 EMBV3_06470 ACCCAGGGCCCCCAGCCCAGGGACCTTGCTCCAAGTGGAAGCATCCTTTCAATCGTTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02665 CTCTCGGATTGATCTGCACAAATACCTTCTAAGAGTACGATTTCAAAACCAGCAATTGGT Gene GeneID:535403|MYST4:XM_002698885:16_cdna Constitutive 2 NULL GeneID:535403 28 GENE MYST4 NULL MYST histone acetyltransferase (monocytic leukemia) 4 EMBV3_30048 TTGGCAAACATTCCACACTGAATCCACTCATCCACAAGCGATCTCTGGGAACTTGCTATC Gene BVV0101_084925 - 1 EMBV3_17683 GK000008.2:61579898-61611660 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28632 ACCTGCGCATGCACCGCCTCTGCACCGCAGGCCTGTCCAAAAAGAAGCCGGAGGCCCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20382 AGACAGGTGCTCTTGGAGTTCCGTGCTTCCTGATCCAATGGTGCCAAACCCTTCATCTCT Gene GeneID:509843|LOC509843:XM_002687315:115_cdna Constitutive 0 NULL GeneID:509843 5 GENE LOC509843 NULL similar to histone deacetylase 7A EMBV3_43673 CGGGACAATGAGCTGATGATGAAAGTGCAGCCACAACAAAGTAGATGAGCACAGGTGTGG Gene BVT0102_216621 + 1 EMBV3_28563 GK000008.2:99850893-100138373 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38899 AAGAGCTTAAAAGCCAGGCACCCAGAGAGGTGGGGGCTGGTGTCATCTCCGCCTTATAAA Gene BVV0102_399854 + 1 EMBV3_15418 GK000025.2:1492438-1503558 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28073 TTTGTCTGAGCCGGTTCGAGGGCTTACAGTTTTGGATCAACTTTTTTCTGCTCCTGGGGG Gene GeneID:512289|MALL:NM_001046115:50_cdna Constitutive 0 NULL GeneID:512289 11 GENE MALL MGC127356 mal, T-cell differentiation protein-like EMBV3_07350 GGGGAGGACGGCTTCCGAGGGACCGCGCCTAAAGGCCCCCCTTCTGGGAAAGACCGGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00545 CCCAAGACTATCCACCCTTCCTCTTCTAGCCCTTACTGTGGAGTCTGCAGCTAACTCTGA Gene BVT0102_106350 + 0 NULL GK000007.2:53421128-53424461 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213519 TCONS_00213518 1 XLOC_130472 Coding TCONS_00213519 XLOC_130472 Coding Coding SLC35A4 7:53421445-53426345 o TSS159941 2558 2 TCONS_00213519_6 324 3 0.478464992855685 0.000331151466166198 4.92405909020981e-05 0.000174540804388284 3.78895489790547e-11 7.8201164845254e-19 2.0753248750863e-09 0.000118357777354013 1.80311501607614e-15 0.000282560850546674 0.000105940272906212 1.25297134659515e-05 8.04975635966166e-44 2.24337915913607e-06 0 5.59924823228266e-27 0.00215758326939953 0.00066305961465982 0.00103610068841999 0.000378273101515748 3.03665466930692e-05 3.82394714115018e-11 0.000152020235348578 0.000714507812666463 0.00226098922441646 0.000347839334344731 0.000427963691562287 8.34894095152672e-05 0.000537757642552893 0.000384108045242695 0.000401204419836726 XM_005209469.1 SLC35A4 PREDICTED: Bos taurus solute carrier family 35, member A4 (SLC35A4), transcript variant X1, mRNA. 0.0 4549 98.73 0.999609069585614 NM_080670.2 SLC35A4 Homo sapiens solute carrier family 35, member A4 (SLC35A4), mRNA. 0.0 2257 78.28 0.996481626270524 TCONS_00213519_6 sp|Q05B73|S35A4_BOVIN S35A4_BOVIN Probable UDP-sugar transporter protein SLC35A4; 0.0 630 100.00 0.996913580246914 1 coding 0 0 0 0 -0.0231636836061158 0.859909882352204 -0.012598858829542 0.891917256383324 GATGACAAGGATTCTCTTCCCAAGCTTAAGGACCTGGCTTTTCTCAAGAACCAGCTGGAACGCCTGCAGCAGCGTGTGGAAGATGAAGTCAACAGTGGTGTAGGCCAGGGCTTCCTGGCTGGCTATGTGGTGGCCAAACTGAGGGCATCAGCAGTATTGGGCTTTGCCGTGGGCACCTGCACTGGCATATATGTAGCTCAGGCATATGCTGTGCCCAATGTGGAGAAGACATTGAGGGACTATCTTCGATCACTGCGCAAAGGGCCCGACTAGCTCTGGATTCCATGAGGGAGGCAGGATGAGCAGCTGGGGGCAGCAGGTGGAGGCCTTCAGCCACAGATGCCATATCTGGCCACCCTGGCTTTCACCCATTTGCTGTCTCCAGCTTTCCCACCACCTTCAGCCTTGCTTCCTTTCCTGCAGAGACTGGACAGTGGCTCATCAGCCAACACCCTGAACCCCTTGCCTCCATAACCCCATGGGACTGGCCCCAAGACTATCCACCCTTCCTCTTCTAGCCCTTACTGTGGAGTCTGCAGCTAACTCTGACTCTCAGTATTCTCTCTCAAGGCTCCTCCCTCCTGGGAGCCAGCTCCATAACTTGATTTTCCCTGAACGTGTCACAACCCCCAGCCCACCACACCCCGCCTTGCTAGCTACACAGGCCACCCAGGGTCTAGTTTGGGCATGAGTGTAGAGGACGGGGGTGTGCCAGGCCTGGGCCGTCCCAGGAAGGCCCGCTGGACCCTGATGCTGCTCCTGTCCACTGCTATGTACGGTGCCCATGCCCCATTGCTGGCACTGTGCCACGTGGACGGCCGTGTGCCCTTCCGACCCTCCTCGGCTGTACTGCTGACTGAACTGACCAAGCTGTTGCTCTGCGCCCTCTCCCTCTTGGTGGGCTGGCAAGCATGGCCCCAGGGGACCCCACCCTGGCGCCAGGCTGCCCCGTTTGCACTGTCAGCCCTGCTATACGGCGCCAACAACAACCTGGTGATCTACCTGCAACGTTACATGGACCCCAGCACCTACCAGGTGCTGAGCAATCTCAAGATTGGAAGCACAGCCCTGTTCTACTGCCTCTGCCTCCGACACCGCCTTTCTGCACGCCAGGGCTTAGCGCTGCTGCTGCTGATGGCCGCCGGAGCCTGCTATGCAGCCGGGGGCCTCCAGGACCCAGGGACCACCCTTCCCGGGCCCCCCTCAGCAGCTGCTACGAGCCCCATGCCCCTGCACATCACTCCACTGGGACTGCTGCTTCTCATCCTGTATTGCCTCATCTCCGGCTTGTCCTCTGTGTACACAGAGCTGCTCATGAAGCGGCAGCGGCTGCCGCTGGCCCTTCAAAACCTCTTCCTCTACTCTTTTGGTGTGCTCCTGAACCTAGGTCTGCATGCAGGTGGTGGCCCCGGCCCGGGCCTCCTGGAGGGTTTCTCGGGATGGATGGCACTCGTGGTGCTGAGCCAGGCACTGAATGGACTGCTCATGTCGGCCGTCATGAAACACGGCAGCAGCATCACACGCCTCTTTGTCGTGTCCTGCTCTCTAGTGGTCAACGCCGTGCTGTCAGCCGCCCTGCTGCGGCTTCAGCTCACCGCTGCCTTCTTCCTGGCCACACTGCTCATTGGCCTGGCAGTACGCCTGTACTACGGCAGTCGCTAGCCCCTCACCACCTCCATCCTGACTCCTGACCTGTAGGTTGGGCACCACCATCAGAGCCACCTCCCAGTGCTGACCCCTCCCCTCAGCAGCCCTGTAACAAGTGCCTTGTAAGAAAAGCGGGGGAAGTGGGAGCAGCCACGTTAGTCTCTGGAGGTAGGTTATCCCTGGGAGACTTGAAGGCTGGGTTTGATTAAGAAAACTCTTCCACCCCCCACAACTACTTCCGGACTAAGGAATTAGGGGAGCATCCGTTCAGAGGCCTGAGAAGTTATCCTATGCTGATGGAGGAGCCATGCTGCTTCATCCTGCGTGAATGCAGTTGGCTCTCCTTGCCTGCTGTGATCACCCCAGCAGACCCATAGCCCCCCAGGCCTGGTGCTGGCTGCTCCAGCCCAACCATGGTACATGGCTCCCCCATAACATAGCTCATCTCCCAGTCATTGTAGGAAAGCCCAGTTGCCGAAGGTTCTGTGTATGTTCATCACCCAGGCCTCTGCCATGCTTCCGTGGCTCCAGCAGCATCTGGAGGTAACACCCCCTGCTCTCTCCACACCTAGCCTTTGTTCTGGAATCCTCAGAGAGGACTGGGGCTTGACTCATCTCAGGGAATGTTGCTCCTGGACCCTGGCTTGAGTCTACACTCCTGATCTCTCTGCTCACCCTAAGGGCTCTCTCAAGGCCCACTGTCCCCTCTGAAGCTCCTCGGAGGTATTATTCTTCCCTCTCTGGGTCCTGCCCTTTGCTCGCAGCGACCCAGCTCCCATCTGCCTGGGGAAACTCTACATGGAGTGGCCTGGGACCAGGCACAGGGAAACTTGCTTAACTCAATCAGTGTCTAAATGCAATAAGGTCTTAATAAAGTGCTCTGGGATGTAGGTGATTCCTACAGTTGGTCA TCONS_00213520 s 5' 0 TCONS_00217169 TCONS_00217170 TCONS_00217171 r 5' 319 EMBV3_02643 CCTGACTTGGCCCAGGAGTAGTAATCTGCCAACCTCTGGTGGGAAACTCTAGCTCTTTAA Gene BVT0102_144782 + 0 NULL GK000022.2:25461075-26097854 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126521 1 XLOC_077454 NonCoding TCONS_00126521 XLOC_077454 NonCoding NonCoding - 22:26074143-26075686 - TSS94857 1428 1 TCONS_00126521_1 57 0.292717086834734 2 0.0752269779507133 0.00391831273611394 0.00286041695366568 0.00236102989776608 0.0023900563074864 0.00201739762383286 0.000637925171685089 0.000857604485764746 0.000542596538052684 0.00175704192227699 8.64385661019022e-06 0 0 2.00930115929572e-06 0.000181176607023393 5.15356928040644e-05 0 0 0 0.00150164460353029 0.00520434509018439 0.000603744775722971 0 0 0 0.0031545321292134 0.00214127927339391 0.0020710161237392 0 0 0 XM_005228472.1 MID1 PREDICTED: Bos taurus midline 1 (Opitz/BBB syndrome) (MID1), 3e-66 257 88.94 0.138655462184874 0 noncoding ACAGGGCTTCCCTCGTGGCTCAGATGGTAAAGAAGCCACCTGCAATGCAGGAGACCCAGGTTCGACCCCTGGGTCAGGAAGATCCCCTGGAGGAGGACATGGCAACCCACACCAGTGTTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATAGGGTCACAAAGAGTCAGACACAACTGAGCGACTGAGTGCACACTCATGCAGACACCGTTATTTATAAAAAGTAACAAAAATGAAAACCAAAATGGTAAAAAAAGAACCACAGACACAATGTCGAGCCCGAGGTAGAGACTCGTCAGAGTGAAGGATCAAGGAGCCAAGAGGAAATGACTCCCATTCTTCCTCCTTTCGTATCTGACAAGGAAGGCTCACAGGAGCTGCAAGGAGAAATCAAACATCATATCCCAATCATAGCTCCCTTCTGAGGGCTGTGACTGAAGTTACCTAACCCCAGGGGCCATTAGACTGTACATGATGTCTTAGCAGATATACCCCCTCATTTTGAAAACCACCTCTAACCTTCTGACCCATGCCACAAATAAGAGAAACTGAATTTTAAAAGGCACAACATTAAGCCAGACCTTCCCTAACTTAAGTCAAGAAAATGTTAACACATTCACTGGATCATGTAGACTGAAAATTTGATTGTGTAATTTTATTCCCATGCAAAATAATCCTCCACTTTTAAGAGCCTGTTAAAATAATTATTTTAATGTAGATCATTTGTTTTAGGTTAGGGGCTAATTGCTATTCCTTTCATTTATAGAAATAGACAAAAAATGTATTTCTCTCTCATCATCTCAGCAGCCAACTATCTGAGTGCTTGAAAATAGTAAACTTCATGTGCATTAAGGATTACACCTCCAGTGTCCATAGGCAAAAAAAAAAAAAAAAATTGTTTTGGCTTTTTAAAAAATTTGACTTACCTATTTACAATGTGCCCTGCAGTTGTTTCTTTTAAATTGCCATCACTGTGTTAATTGTTTTAATATTATGACCATTTTCCTTGCACTGTAGACTAATTTTTATTTCCTCTCGGGGTCATTCTAGTATTTCAGAACTACAAAAAGAGGATGCTGTTTTGCTGAGCTTGACTATATTGACCTGAGGTCAGCCAACTTTTTCTGTAAAGGGCCAGACAGTAAATATTTTAGGCTTTGTGGATCATGTCCTCTGTCAACACTATTCAGCTCTACAGTCGTATGAAAACAGTCCAAGACAATTTGTAAACGAGCGTAGCTGTGTTTCAATACAACTTTGCAAAAAGAGGAGGAACCTGACTTGGCCCAGGAGTAGTAATCTGCCGACCTCTGGTGGGAAACTCTAGCTCTTTAATGCCTGAAAAATTGTAACATACGTCTATGTCTGTGCAATTTTAAAACAGTTTAAATAGAGTAATAAATGTAGCCTA TCONS_00128378 TCONS_00128380 TCONS_00128383 TCONS_00128377 TCONS_00128376 TCONS_00128379 TCONS_00128381 TCONS_00128382 r 3' 22124 TCONS_00128378 TCONS_00128380 TCONS_00128383 TCONS_00128377 TCONS_00128376 TCONS_00128379 TCONS_00128381 TCONS_00128382 r 3' 23666 EMBV3_15862 TTACTGGGAGCAGCTGTGGTTGGCCAGGAGTGCGAAGTACAGATTGTCTTCAAGAACCCG Gene GeneID:407997|TGM1:NM_001010991:59_cdna Constitutive 0 NULL GeneID:407997 10 GENE TGM1 NULL transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase) EMBV3_18749 GAGCTGGGATCGGGGACGCACAGAGGTCAGGCTGCTTTTGCTGTGCTATGGAGACAGGTG Variant GeneID:539190|WDR45:NM_001076151:99_cdna 65^136 2 EMBV3_23397 GeneID:539190 X GENE WDR45 MGC139750 WD repeat domain 45 EMBV3_17435 GGCCTGCCGGAAGAATGCTGATCTCCTTTGCATCAAGGACAACTTATCAGCCAGTTTCTG Gene GeneID:525276|ADAMTS12:XM_002696400:163_cdna Constitutive 0 NULL GeneID:525276 20 GENE ADAMTS12 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 12 EMBV3_22881 GTCGAAGCTGCGGGCGGAGGCTGGACTAGGGCCGCTTTCGCTGCCAAGATGAAGAGCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13318 GGCAGAAATTTCTGAGTCTGTAGACAAAATCAAAGTGCATTGATCACTACACCAAACAAT Variant GeneID:511803|PSMD1:NM_001101077:97_cdna 220^389 1 EMBV3_11423 GeneID:511803 2 GENE PSMD1 NULL proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 EMBV3_23705 GGTAAACACCCGCACAAATCTACCAACAAGAAACTGATTGAGGCTGGGGAGGTGGGAAAG Gene BVT0102_238646 + 1 EMBV3_04925 GK000007.2:3444391-3471038 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24169 TGGTTCTGTTTGCTGCCCTGCATGGACCTGAAGAATGGAAACTGATGTTCAGGATTCAGC Gene GeneID:504212|C3H1orf146:NM_001038024:114_cdna Constitutive 1 NULL GeneID:504212 3 GENE C3H1orf146 C1orf146 MGC133659 chromosome 1 open reading frame 146 ortholog EMBV3_19292 GGAATTTGAGGAATTCACCAGGAAGCTGAAGGAGAAGAAGCCCAGCAGTCCACAGCTAAC Gene GeneID:514973|LOC514973:XM_002697088:181_cdna Constitutive 0 NULL GeneID:514973 22 GENE LOC514973 NULL similar to EF-hand domain-containing protein C3orf25 homolog EMBV3_03547 TTCTTGCGAGCTCCGCGGGTCCCGGCCCAGATGAGGAAGACTGAGGCCTGTTGGAAGTAC Variant GeneID:510173|SH2D3A:XM_002688904:182_cdna 51^419 1 EMBV3_19807 GeneID:510173 7 GENE SH2D3A NULL SH2 domain containing 3A EMBV3_21383 CAGTTTTGGCTTTGGGATGCATTCTTCACCTCCCCAGGGCTCTGTTGGAAAAGGATCTTT Gene GeneID:100140439|POM121L2:NM_001162927:2_cdna Constitutive 0 NULL GeneID:100140439 23 GENE POM121L2 NULL POM121 membrane glycoprotein-like 2 (rat) EMBV3_19948 TATTTCCCGCCTGGGGATGGCGACCTACACCTGCGGTGGTTTGAACGGCAGGCGAAGAAG Variant GeneID:513617|ZNF622:NM_001034451:20_cdna 111^618 1 EMBV3_15366 GeneID:513617 20 GENE ZNF622 MGC127282 zinc finger protein 622 EMBV3_20491 TGTCTATAAAGGGGGAATAACAGACAACATCATCTGTGTGTCACCGGACGCCTGGAAGGG Gene GeneID:100336442|LOC100336442:XM_002697062:556_cdna Constitutive 0 NULL GeneID:100336442 22 GENE LOC100336442 NULL leucine-rich repeats and transmembrane domains 1-like EMBV3_00171 AGGATGATCGTTAATGGATAAAAAGAGGAAGGGGCAGGCGGAGGCTTGATTCCTGGACCG Gene BVV0102_405378 + 0 NULL GK000015.2:63384295-63656457 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07987 AAATCAGTCTCTTATAAATTTTAATTTTAGTCCCATAATCAACAGAATCCCACAGGAAAG Gene GeneID:613773|PITPNB:NM_001078040:83_cdna Constitutive 4 NULL GeneID:613773 17 GENE PITPNB MGC139835 phosphatidylinositol transfer protein, beta EMBV3_03154 GCAAGTAGCCAAGTTTAGAGTGAGTGTGAGAGGTGAGCATACAAGGGTACAGATAGCAGG Gene GeneID:528425|NUDCD1:NM_001076880:23_cdna UTR3_Alt 2 NULL GeneID:528425 14 GENE NUDCD1 MGC140389 NudC domain containing 1 EMBV3_18127 TTCTGAAGCGATCCACAAAGCCAAGATCGAGGTTTCAGAGGAAGGCACCAAGGCATCTGC Gene GeneID:513955|SERPINE3:NM_001100359:100_cdna Constitutive 0 NULL GeneID:513955 12 GENE SERPINE3 NULL serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 EMBV3_15351 GTAAAACCACTCTTGGGAATAGCCTGCTCTGAGACGGTGCTTCTTGCTTCTTCTGTCTGC Gene GeneID:530689|LOC530689:XM_002686194:420_cdna Constitutive 0 NULL GeneID:530689 3 GENE LOC530689 NULL similar to MGC157062 protein EMBV3_10693 CAAACACTGCTTTTTATTGGAGCAGGAATTCCTACGCTACAGAGTTCCGTCTCCCAGTGG Gene GeneID:281385|PDYN:NM_174139:718_cdna Constitutive 1 NULL GeneID:281385 13 GENE PDYN NULL prodynorphin EMBV3_37364 TAGGAAGGTTTCAGCCCACCACACCCAGGTTACATCTAGGTCAACTTTGGGAAACAAGAG Gene BVV0102_337229 - 1 EMBV3_10350 GK000030.2:54369756-54537622 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246957 TCONS_00246953 TCONS_00246954 TCONS_00246955 TCONS_00246958 TCONS_00246959 TCONS_00246956 1 XLOC_151176 Coding TCONS_00246954 XLOC_151176 Coding Coding SYTL4 X:54536267-54575923 j TSS185043 3643 1 TCONS_00246954_3 671 0.0430963491627779 17 0.90856134157105 0.000976955471262686 0.000819784193945333 0.000403550486333003 0.000479518120591808 0.000849077412591161 1.31780281903111e-07 3.55971698360919e-13 0.000281836078236074 0.00104640933423502 0.000526040890922436 0.000101681272533157 8.05367017857064e-06 3.0349651637932e-26 0.000192556697399238 0.000186566754177201 0.000298486066578506 2.05366010687087e-110 4.36218045109999e-05 0.000451933588474491 0.000697113168302912 0.000102369726982593 0.000216604004438752 0.000383628879803351 0.000304745620956137 0.000515231256071731 0.000150378724950192 0.000404444998355448 4.80043772026349e-05 3.68078740983728e-12 0.000119208932648779 XM_005227785.1 SYTL4 PREDICTED: Bos taurus synaptotagmin-like 4 (SYTL4), transcript 0.0 6570 100.00 0.999725500960747 XM_005262227.1 SYTL4 PREDICTED: Homo sapiens synaptotagmin-like 4 (SYTL4), transcript 0.0 3442 85.66 0.800439198462805 TCONS_00246954_3 sp|Q96C24|SYTL4_HUMAN SYTL4_HUMAN Synaptotagmin-like protein 4; 0.0 1257 92.40 0.998509687034277 2 coding 0 1 1 1 0.00756097278690929 0.960598421499969 -0.0161387194371025 0.730790601456974 AGATTCTTTACCATCTGAGCCACCAAGGAAGCCACCAACCGAACTAAAGGCAAATCTGGTGGCCTGGTAGATTTGAAGAAAGAAGAGTAGAAGGAAAAACTAGGACAAGTCATGTCGGAGATACTTGATCTCTCTTTTCTGTCTGAGGTGGAAAGGGATTTGATCCTCAGTGTTCTACAAAGAGATGAGGAACTCCGAAAAGCAGATGAGAAAAGGATTAGGCGACTGAAGAATGATTTACTGGAGATAAAAAGGAAAGGGGCCAAAAGGGGCAGCCAGCGCTATAGCAATCGGACCTGCGCCCGGTGCCAGGAGACCCTGGGCCGTTTGACTCCCAAGACCAACACTTGTTGGAGTTGTAATCATCTGGTGTGTCGGGACTGCCGCGTTCAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGAAATAGAGCTGAAGAAAGCAACTGGAGACTGGTTTTATGACCAGAAAGTGAATCGCTTTGCTTACCACACCGGCAGTGAGATAATCAGGATGTCCCTGCGCCACAAACCTGCAGTGAATAAAAGAGAGACAGTGGAACAGTCTCTCCTTCATCAGTCACAATTGGGTGATATCTGGCCAGGAAGAAAGATCATTCAGGAGCAACAGAAGGAGCCCAGCATGTCATTTGAAGTGCCCAAGCTGAAAAGTGGAAGGAGTGTACTGGAAGCCGAGAGTGAGAGCCTGGATAGCTATACAGCTGACTCGGATACCATGTCCAGGAGAGACTCACTGGATAAATCTGGCCTTTTTCCAGAATGGAAGAAGATGTCTGCTCCCAAACCTCAAGTAGAAAAGGAAGCTCAGCTTAGGGGTCAAAATGTGGTATCTGTGGACGAAGGTGAAATGATATTCAAGAAGAACACCAGAAAAATCCTCAGGCCTTCAGAATATACTAAGTCTGTGATCGATCTTCGTCCGGAAGATGTGGGGCATGAAAGTGGCGCCCTGGGAGACAGGAGCAAATCTGTCCCAGGCCTCAGTGTGGATATGGAAGAGGAAGAAGAAGAAGAAGACATTGACCACCTGGTGAAGTTGCATCGTCAGAAGCTAGCCAGAAGCAGCATGAGAAGTGGTTCCTCCATGAGTACGATTGGCAGCATGATGAGCATCTATAGTGAAGCCGGTGATTTCGGGAACATCTTTGTGACTGGAAAGATTGCCTTTTCTCTGAAGTACGAGCAGCAAACACAGGCTCTGGTCATTCACGTGAAGGAGTGCCAACAGTTGGCCTATGCTGATGAAGCCAAGAAGCGCTCAAATCCATATGTGAAGGCTTATCTTCTGCCAGACAAATCCCGCCAAGGAAAAAGAAAAACCAGCATCAAGCAGGACACTATTAATCCGTTATATGATGAGATCCTCAGATATGAAATCCCAGAATCTCTCTTGGCCCAGAGGACTTTGCAATTCTCGGTGTGGCATCATGGTCGTTTTGGCAGAAACACTTTTCTTGGAGAGGCAGAGGTCCAGATGGATTCCTGGAAGCTTGATAAGAAACTGGATCATTGTCTCCCTTTACATGGAAAGATCAGTGCTGAGTCCTCAACTAGCTTGCCAGCACACAAAGGCGAGTTGGTGGTTTCATTGAAATATATCCCAGCCTCCAAACTCCCCGTTGGAAGTGACCGGAAAAAGAGTAAAGGTGGGGAAGGGGGAGAGCTCCAGGTGTGGATCAAAGAAGCCAAGAACCTGACAGCTGCCAAATTAGGAGGGACTTCAGACAGCTTTGTAAAGGGATACCTCCTTCCCCTGAGGAACAAGGCCAGTAAGCGTAAAACTCCTGTGGTGAAGAAGACTCTGAATCCCCACTATAACCATACATTTGTCTACAATGGTGTGAGGCTGGAAGATCTCCAACACATGTGCCTGGAACTGACTGTGTGGGACCGGGAGCCCCTGGCCAGCAATGACTTCCTGGGTGGGGTCAGGCTGAGTGTCGGCACAGGGATCAGTAACGGGGAAGTGGTGGACTGGATGGACTCGACTGGGGAAGAAGTGAGCCTGTGGCAGAAGATGCGACAGTACCCAGGGTCTTGGGCCGAAGGGACTCTGCAACTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGCTTGTGAGCCCTGTCCTGCTCTGCAGGTCCATCCCTGTCCAGGGCAAGTCAGAGGAAGCGAAGAAACCAAGGGCGAAGATTTATAATTTGTGTGTGTGTGTGTGTGTGATGTATGTGTGTGTATATAAATGTGTATTTCTACAGATCTCATTATGCTAGAGTGATGTAGACTTCCCCTTTTTAAAGCAGGCTTAAGAATAAGGGTCTCTTCAAAATATTTTTATTTGTGCATTAACTACTATATATTTTCAGAATCCATGATTCTTACATCTTTATGAGATTTAATTAATTTATCTTTTAAAACAACTTTTTAATCGCCTGTCTTGCTATCCTGGTTCCTCCTTCCACAGGAAGCCCTGGCTGCCTTTGGCACTTGTACTGGTCTGTGTTTCAGGGTGTGCCTGGTCTGAGGCCAAGGCTCTGGGAAGCAGGGGTGGTTTACTAAAGACAGAAGAAGATTGGAGAGAGGTGACTGGGTCCCTTCTTTCTTCACCGCTTTATGCTTTTCACTCCATTTCTACCTTGACACATTTCTGAAACTTGGCTTTTAACTCTTGTTTGGAGCAGTTTCTGCCTTGCTTGGGTCTAATAGTTTTCCTGGAAATGCTGAGAAGATGTCTAAGTTGCTTCCAGTTCTGAACACCTTCCCTAGACCTCTGCAGGACCCTTATAATAGAGTTGCTTTAGAAGAGCACTTTAATTAGATAATGGCCTTTGGACTAGGTCACAGGCATGCACAGTACAGGCTTCTCAGTGGTCCCAAAGGACCAGCAATGGAGCATCTCTCAGCCCGTGCTGATTCTTTGCATTTTAAACTGATATAGCAGTCGTTAGAAAGCTCCTATGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTAGTAGGCTGCAGTCCATGAAGTCGCTAAGAGTTGGATATGACTGAGCACTGAACTGAACTGTTATATCAGCCTGAATAGCCAGCTATGGTCTAAACCAGTCCAGTGTTTTCTCTGTGCTGGGCGCTGTTAGTGTCCAAGAGAGTGTGTTCAGAGAACACAGCTTTTCTGACCTCTTTCTTGAAGTGGTTTCAGTTCCTATTTTTTTCTCTTGTTTCCCAAAGTTGACCTAGATGTAACCTGGGTGTGGTGGGCTGAAACCTTCCTAAGAAGGGTCTATTGACCTAAGGTTTATTTTCTGAAACCCACTGTCCCAAACTGACCTTTTAATTCTCACAATTGTACCTTCCCAAAGTCATCTGTAAAGGGAATCTATACTGGAGAAGAAGTTCCTTTCAGTAGAGTCAGATGCCAGCTGCCTGTCCTATGAGGCTGTGGGATTGAGGGTGGATACTGTGGTTTCTGTTGTATGTGTGAAGTGAACAAAATAGTATTTGGTGTGGATTAGTATTGTACTGGAAAGCATAACTTGGGATCCTGGACTGTCACTTGCTCCTTTGTTCTCCATCCCCCCTGAAATGTCTGTGTGCTTCAATAAAACTTTCTTCCTTGTCAA EMBV3_02734 GTCTGTTAGTGGTAAAAGTGGGACAAAATAGGCTTGCAAAATAAATTGCCAGATGGCACC Gene GeneID:507865|MARCH7:NM_001100317:79_cdna UTR3_Alt 2 NULL GeneID:507865 2 GENE MARCH7 NULL membrane-associated ring finger (C3HC4) 7 EMBV3_30292 ATTTCCAACATTCTGGGAGGGGGGTCATAGAGGATCCCTCTGTGATGTATGTCAGAGAGC Gene BVV0102_141812 + 1 EMBV3_08289 GK000007.2:11310972-11324605 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00222777 TCONS_00229388 TCONS_00209712 TCONS_00166695 TCONS_00241769 TCONS_00140807 TCONS_00232986 TCONS_00199036 TCONS_00091663 TCONS_00124582 TCONS_00006307 TCONS_00091220 TCONS_00081008 TCONS_00007086 14 XLOC_136084 XLOC_138883 XLOC_128223 XLOC_101531 XLOC_148433 XLOC_085236 XLOC_142468 XLOC_120689 XLOC_056436 XLOC_076126 XLOC_001870 XLOC_055996 XLOC_049890 XLOC_002648 Coding TCONS_00007086 XLOC_002648 NonCoding NonCoding - 1:37454848-37455334 - TSS4163 486 2 TCONS_00007086_2 48 0.796296296296296 1 0 0 0 0 0 0 0 0 0 0 9.4067056350201e-07 1.57008762283997e-06 1.22622928375616e-06 0 0 0 9.82735425465441e-05 0.00803934631566828 0.000160045067891931 0 1.12099833122423e-05 0 1.65412690339641e-05 3.83824073258849e-05 2.15594454874111e-05 1.58401441150031e-06 0 0 0 0 0 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 9e-93 343 80.05 0.792181069958848 NM_020729.2 ODF2L Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), 3e-41 172 70.18 0.796296296296296 0 noncoding GTTTCCTTTGATGTGCAGAAGCTTTTAAGGTTAATTAGGTCCCATTTGTTTATTTTTGCTTTTATTTCCAATATTCTGGGAGGTGGGTCATAGAGGATCCTGCTGTGATGTATGTCAGAGAGTGTTTTGCCTATGTTCTCCTCTAGGAGTTTTCTAGTTTCTGGTCTTATGTTTAGATCTTTAATCCATTCTGAGTTTATTTTTGTGTATGGTGTTTGAAAGTGGTCTAGTTTCATTCTTTTACAAGTGGTTGACCAGATTTCCCAGCACCACTTGTTAAAGAGATTGTCTTTAATCCATTGTATATTCTTGCCTCCTTTGTCAAAGATAAGGTGTCCATATGTGCGTGGATTTATCTCTGGGCTTTCTATTTTATTCCATTGATCTAGTACCAAATAGCTGCACTCTATCAAGACACACATATGCAACTGTTTATTTACTTGACTCTATTTCTTACAAGATGGTAAATATCATGAGATCAGGTAC TCONS_00000351 . 3' 331386 TCONS_00000351 . 3' 331871 EMBV3_26872 TGAAGGGTATGATGCCATCTGGTCATTCAGATAAGGAGCTTGTCTCAGCACTAAGGAGTC Gene GeneID:100300021|LOC100300021:XM_002692936:59_cdna UTR3_Alt 2 NULL GeneID:100300021 15 GENE LOC100300021 NULL similar to transmembrane protein 123 EMBV3_00571 TGCGCCCCTCCTTATCCACGTCAGTTCCTTCGCAGCTACCAGTCATAAGAAGAAGCTCTA Gene GeneID:527363|LOC527363:XM_002684885:105_cdna Constitutive 0 NULL GeneID:527363 1 GENE LOC527363 NULL similar to kelch-like 6 EMBV3_36394 TCTCCATGCTGGACACTGGACACACTAAATTGGGGGGCTTGCCCTGTGCTTGCTTAAAGT Gene GeneID:407239|USF1:NM_001001161:218_cdna Constitutive 0 NULL GeneID:407239 3 GENE USF1 MGC137781 upstream transcription factor 1 EMBV3_02781 GAGCAGTCAAGCCAGTAATCTCACTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTCCT Gene BVT0102_051712 - 1 EMBV3_04510 GK000016.2:39421013-39505887 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00010779 TCONS_00253025 TCONS_00200933 TCONS_00238445 TCONS_00199803 TCONS_00115687 TCONS_00152859 TCONS_00210177 TCONS_00176249 TCONS_00199063 TCONS_00186108 TCONS_00165813 TCONS_00248863 TCONS_00249283 TCONS_00252354 TCONS_00008225 TCONS_00009883 TCONS_00135547 TCONS_00010052 TCONS_00218899 TCONS_00251930 TCONS_00239219 TCONS_00175545 TCONS_00040583 TCONS_00055867 TCONS_00116666 TCONS_00117484 TCONS_00021596 TCONS_00040195 TCONS_00065249 TCONS_00157488 TCONS_00238457 TCONS_00123618 TCONS_00032143 TCONS_00207068 TCONS_00190323 TCONS_00152628 TCONS_00072815 TCONS_00177280 TCONS_00206861 TCONS_00250580 TCONS_00253665 TCONS_00062743 TCONS_00019962 TCONS_00133066 TCONS_00020724 TCONS_00048558 TCONS_00063180 TCONS_00245928 TCONS_00153219 TCONS_00185807 TCONS_00162783 TCONS_00223462 TCONS_00088087 TCONS_00030942 TCONS_00176254 TCONS_00124584 TCONS_00056728 TCONS_00142124 TCONS_00006827 TCONS_00157440 TCONS_00189890 TCONS_00022065 TCONS_00250881 TCONS_00064461 TCONS_00007719 TCONS_00201733 TCONS_00238326 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00066285 TCONS_00179470 TCONS_00222115 TCONS_00056147 TCONS_00054954 TCONS_00070840 TCONS_00154085 TCONS_00063487 TCONS_00251915 TCONS_00047158 TCONS_00250938 TCONS_00050046 TCONS_00176255 TCONS_00124110 TCONS_00020010 TCONS_00249570 TCONS_00048821 89 XLOC_006139 XLOC_131641 XLOC_006330 XLOC_155966 XLOC_122583 XLOC_145112 XLOC_121455 XLOC_069856 XLOC_092624 XLOC_128687 XLOC_106028 XLOC_120716 XLOC_112161 XLOC_100653 XLOC_151806 XLOC_152226 XLOC_155295 XLOC_003783 XLOC_005436 XLOC_081770 XLOC_005604 XLOC_132218 XLOC_154871 XLOC_145885 XLOC_105326 XLOC_024399 XLOC_033675 XLOC_070832 XLOC_071650 XLOC_012269 XLOC_024012 XLOC_039971 XLOC_095943 XLOC_145124 XLOC_075170 XLOC_018386 XLOC_125587 XLOC_116358 XLOC_092393 XLOC_044583 XLOC_107054 XLOC_125381 XLOC_153523 XLOC_156604 XLOC_037470 XLOC_010640 XLOC_080989 XLOC_011399 XLOC_028690 XLOC_037907 XLOC_150855 XLOC_092984 XLOC_111860 XLOC_099664 XLOC_136762 XLOC_052874 XLOC_017192 XLOC_106033 XLOC_076128 XLOC_034531 XLOC_086549 XLOC_002389 XLOC_095895 XLOC_115927 XLOC_012736 XLOC_153824 XLOC_039185 XLOC_003279 XLOC_123378 XLOC_144993 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_040999 XLOC_109243 XLOC_135424 XLOC_033950 XLOC_032763 XLOC_042617 XLOC_093846 XLOC_038214 XLOC_154856 XLOC_027294 XLOC_153881 XLOC_030177 XLOC_075662 XLOC_010688 XLOC_152513 XLOC_028952 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_18954 CCTTCACCGTCCCAAGTGGAAACACAAAATTGAAAAAAAAAAAAAAATACTGGGGACAAA Gene GeneID:781063|TBX3:XM_002694588:669_cdna Constitutive 2 NULL GeneID:781063 17 GENE TBX3 NULL T-box 3 EMBV3_24311 CACGTGATTACAGCACTCCTTGTGAAGAAGGAACTGGATGCCTTCCAGCCATACCCTATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19458 GGAGAAAATCAGTGGTCAATACTTTTTTGATTTAAGTTGTCTGAGACTACATTTTCAAAA Gene GeneID:539376|Mynn:NM_001035424:34_cdna Constitutive 4 NULL GeneID:539376 1 GENE Mynn MGC127144 myoneurin EMBV3_28706 ACTTGATTCTGACTGTGTGAAATCCCTGCCCCTTCCATATCCTGTGGAGGTTCTCTTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25726 CTAGAAAGTTTCATAATCCTGGGATGTATGCACCATTGCCAGTTACAACTAAAAACTTAA Gene GeneID:520056|NETO2:XM_002694872:854_cdna Constitutive 2 NULL GeneID:520056 18 GENE NETO2 NULL neuropilin (NRP) and tolloid (TLL)-like 2 EMBV3_24354 CTGAAGGGAGACAGAGGTGATCCTGGAGAAAAAGGAGCAAAGGGGGAGACTTCAGTCCTA Gene GeneID:431784|CL43:NM_001002237:266_cdna Constitutive 0 NULL GeneID:431784 28 GENE CL43 CL-43 MGC140494 collectin-43 EMBV3_41015 TCGCCGAGGAAGTGGGCGCCGCGCTGCGCGGCTTCTCAGACCTCGCTGTCATTTTGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04779 TCTGCCCTCACCCTCCTGTCTTGTAGATCTGCCTTCTGGACGGTTGACGAGGTTTGCCAA Gene BVT0102_027566 + 0 NULL GK000011.2:101644869-101650162 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026349 TCONS_00026354 TCONS_00026352 TCONS_00026359 TCONS_00026362 TCONS_00026364 TCONS_00026365 TCONS_00026347 TCONS_00026360 TCONS_00026353 TCONS_00026363 TCONS_00026348 TCONS_00026355 TCONS_00026351 TCONS_00026361 TCONS_00026350 TCONS_00026357 1 XLOC_014971 Coding TCONS_00026350 XLOC_014971 Coding Coding PRRC2B 11:101561986-101648703 j TSS18895 9026 1 TCONS_00026350_8 1539 31 0.896270584436551 0.000779663036104885 0.000142450152198149 0.000459754247850464 0.000276568143990814 8.10667741058275e-05 3.53307008195009e-05 4.50041865271455e-05 1.86726294886339e-47 1.41276783555969e-06 0 6.60933424600239e-06 8.20642093941827e-05 1.7175615259658e-06 9.99950548009621e-07 2.06805595426407e-06 0.00160868974887656 0.000935941983803004 1.20869031271767e-34 2.1779395728478e-237 3.69215848990931e-05 0.00013489755956685 0.000240841741296755 0.000868849446744874 0.0011944261560755 7.02189268944549e-05 0.000344424780995786 0.000712674679573999 0.000307109113894797 0.000253364141613212 0.000565039991392696 XM_868350.5 PRRC2B PREDICTED: Bos taurus proline-rich coiled-coil 2B (PRRC2B), 0.0 1.164e+04 99.36 0.724573454464879 NM_172661.3 Prrc2b Mus musculus proline-rich coiled-coil 2B (Prrc2b), transcript 0.0 4883 83.35 0.504653224019499 TCONS_00026350_8 sp|Q7TPM1|PRC2B_MOUSE PRC2B_MOUSE Protein PRRC2B; 0.0 2389 84.81 0.9545159194282 1 coding 1 1 1 1 -0.0288063377517175 0.801991625208404 0.0610558524745742 0.21594357579135 GAGCAGCCGCGCCGCCGCCTCGCAATCCGCCGCCATCCCGCCGCTTGACCGCCGCCCGATCGCCATCGCCCGGCCCAGTTGCTGAGAGAGGAACTACACCAGGTAGATCGGGAGCGGTGCCGAGAAAAATTTCCTTACTAGATGACATTTCATCGCAATGTCCGATCGTTTGGGGCAAATAACCAAGGGCAAGGATGGGAAAAGCAAGTATTCGACTCTCAGCCTGTTTGACAAGTATAAAGGAAAATCAGTAGATTCAGTCAGATCCTCAGTTATTCCTCGACATGGCTTACAAAGTCTTGGGAAAGTTGCCACGGCCCGGCGCATGCCACCACCTGCAAACCTGCCAAGCCTGAAGTCTGAAAACAAAGGAAACGACCCCAACATCGTGATAGTACCCAAGGACGGAACAGGATGGGCAAACAAGCAGGACCAGCAAGACCCAAAGAGTTCCAGTGTGACGGCCTCTCAGCCGCCGGAGTTGCTGCCGCAGCCGGGTTTGCAGAAATCTGTCTCCAATTTGCAGAAGCCGACACAGTCGATCAGTCAGGAGAATACAAATTCAGCTCCAGGTGGACCAAAGTCATGGGCACAGCTGAATGGAAAGCCAGCAGGACACGAAGGTGGTTTAAGGGCCTCAAGCCGACTGTTATCCTTCTCTCCCGAGGAATTTCCGACGCTGAAAGCAGCTGGAGGGCAGGACAAGGCTGGCAAAGAAAAGGGCGTCTTAGATCCGTCGTATGGGCCAGGACCAAGCCTCCGCCCTCAGAATGTGACAAGCTGGAGGGAGGGCGGTGGGCGAAACATAATTTCTGCCACGTCTCTGAGCGCCTCCCCAACTGAGCTGGGCAGCAGGAATTCGAGTGCGGGAGACGGAGCCCCCTCCTCGGCGTGCGCCAGCGAGTCTAAGGACCCCTCGCTCCGCCCGCCTCAGCCTGTCCGCAGAGGGGCTTCACAGTTCTTGGGGAGTGTATACCACCCACCTACATACCATGACATGCTTCCTGCCTTTATGTGTTCGCCACAGTCATCAGAGAACCAGGGTACAGTGGAACGAGGATCTTTTCCCCTTCCTCAGCTCCGTCTTGAACCCCGTGTTCCTTTTAGACAGTTCCAGATGAATGACCAAGACGGAAAAGAAAATAGACTGGGAGTGAGCCGCCCGATCCGTCCACTGAGGCCGCTGGTGGAGCGGGTGCCACGACCCACCATCGTCAATGCAGAAAACCTGAAGGGCCTCGATGACCTGGACACTGACGCCGACGATGGCTGGGCAGGCCTCCATGAAGAAGTGGACTACTCCGAGAAGCTGAAGTTCAGTGATGATGAGGAGGAGGAGGAAGTGTTGAAGGACGGCAGGCCAAAGTGGAACAGTTGGGACCCCAGGAGGCAGCGGCAGTTATCCTTGAGCTCTGCAGACAGTGCTGATGCCAAGCGCACCCAAGAGGAAGGAAAAGACTGGAGTGAAACAGGAGGCGTGACCCGTGTCGTCCGGAAGGTGCCGGAACCTCAGCCGCCTTCCAGGAAGCTGCACAGCTGGGCGTCAGGCCCTGACTACCAGAAATCCTCCATGGGCACTGTATTTCGGCAGCAGTCTGCCGAGGACAAAGAGGACAAGCCCCCACCGCGGCAGAAGTTTGTCCAGTCTGAGATGTCCGAGGCTGTGGAGCGAGCCCGGAAGCGCCGGGAGGAGGAGGAGCGCCGTGCGCGCGAGGAAAGGCTGGCTGCCTGTGCTGCCAAACTCAAGCAGCTTGACCAGAAGTGCAAGCAGGCTCAGCGGGCCAGCGAGGCCCAGAAGCAGGCGGAGAAGGAAGCTCCCCGCTCTCCGGGGGCTGAGAAGGTGACTCCCCAGGAGAACGGCCCTGCCGTCCACAAAGGCTCCCCTGAGTTCTCTGCCCAGGAGACCGCCAGCACGTTTTCAGAAGAAGCCCCCACAGCTCCTCCAGCAGTGGCTCAGAGCGGCGGCAGTGAGGAGGGGCCCCGGGAGGCTGGCTCCCCTGCACAGGAATTCAACAAGTACCAAAAGTCACTCCCTCCCAGATTCCAGCGCCAGCAGCAGCAGCAGCAGCAGGAGCAGCTGTACAAGATGCAGCACTGGCAGCCGGTGTACCCTCCGCCGTCCCACCCGCAGCGCACCTTCTACCCGCACCACCCCCAGATGCTGGGCTTCGACCCCAGGTGGATGATGATGCCCTCCTACATGGACCCACGGATCCCGCCCACTCGGACCCCAGTGGATTTCTACCCCTCGGCCCTGCATCCCTCAGGATTGATGAAACCCATAATGCCCCCGGATTCCCTCAGTGGGACTGGCTGTCGCTCTGAGGACCAGAGCTGTGTGCCCCCGCTGCCAGAAAGGAAGGTGACCGCCATTGACCCTGCCCCCGTGTGGAGCCCTGAGGGTTACATGGCGTTGCAGAGCAAGGGCTACTCGCTGCCCCATCCGAAATCCAGCGACAATATGGCCATGGACATGCATGTCAGGTCCCCAGACGAGGCCTTGCCTGGAGGTCTTGGCTGCGGCAGTGGGAGCGGCCATTACACGCTGGAGCGGGCAGCCCATGCTGCCTCTGACGTCACCGAAGCCTCCTGTGAGAAGGTAGAGAAGGAGGCCAAGCTGGCCGCCCAGAGGTCAGGCGAGCAGGGAGAGACCATGAAACCATTTGACCTGAACTACGGACACGCCATCATTGAAAATTGCGGATCCAGCCCTGGGGAGGAGAGTGAGGTGGGCTCTCTGGTGGGCGAAGGCTTCATTGAGGTCCTGACCAAGAAGCAGCGCCGCCTGCTGGAGGAGGAGAGGAGAAAGAAGGAGCAAGCCGTGCAGGTTCCTGTCAAAGGCCGAAGTCTCTCCTCTCGAATTCCTCCTCGGTTTGCAAAGAAGCAGAACAACCTGTGCCTGGAGCAGGGTGATGGGCCTGTGCCCGGCAGCAGCCTGGGCACCGAGATCTGGGAGAGCGGCAGCCAGGCCCTCCCCCTTCAGGCCTCGACCAGTGACTCCTGGACCAAAGCTGCCACTGCCTTCACCAGCGCTGAGCCTGGCTCTGCTGAGCAGGGCTTTAAGAGCAGCCAGGGAGACAGCGGTGTTGACCTGAGCGCCGAGTCCCGAGAGTCCTCAGCGACCTCCTCGCAGCGCAGCTCTCCATATGGCACCCTGAAGCCCGAGGAGGCAAGCGGGCCCGGCCTGGAGCCCAAGGCCGATGGCCACAAGGAGCAGACTCAAAAGCAGTCAGAGCCAAAGGATTCAGAACAAGGCTCAGGACAGAGCAAGGAGCACAGACCAGGACCCATTGGCAATGAGCGCTCTCTGAAAAACAGAAAGGGCTCCGAGGGGGCTGAACGGCTGCAGGGGGCTGTGGTTCCCCCTGTTAACGGGGTGGAGATTCACGTGGACTCTGTGCTGCCGGTGCCACCCATTGAATTTGGAGTCAATCCGAAGGACTCTGATTTCAGCTTGCAGCCTGGCTCTGCCTCTGGTCCTGCGGGGAATCCAGTTGTCAAGCTTCAGGACGCATTGGCCAGTAACGCCGGGCTGGCCCCCAGCATCCCCATCCTGCGGCGGGACCACCACATCCAGAGGGCCATCGGCCTCTCCCACATGTCCTTCCCTACCGCCGACCTCACTCTGAAGATGGAGTCTGCGCGCAAGGCTTGGGAAAACTCGCCCAGCTTGCCGGAGCAGAGCTCGCCAGGAGGCGCCGGCTCAGGCCTGCAGCCCCCATCCTCCGGGGGAACCTCCAGCGGGGTCAGCTATAGCTCCTTTGGCGGCGTCTCCATGCCCCCCGTGCCAGTGGCCTCGGTCGCACCTTCTGCATCCCTTCCAGGCAGCCACCTGCCACCTCTCTACCTGGATGGCCATGTGTTTGCAAGTCAGCCCCGACTGGTTCCTCAGACCATACCTCAGCAGCAGAGTTTCCAACAGGCTGCCGCTGCCCAGCAAATCCCAATTTCCCTTCACACGTCTCTACAAGCTCAAGCCCAGCTGGGACTGAGGGGCGGGCTGCCCGTCTCCCAGTCTCAGGAGATCTTCAGCTCCTTACAGCCCTTCAGGTCTCAGGTGTACATGCACCCCAGCCTGTCACCGCCCAGCACCATGATCCTCTCCGGAGGCACAGCCTTGAAGGCCCCCTACTCGGCGTTCCCAGGCATGCAGCCCCTGGAGATGGTGAAGCCCCAGTCCGGCTCGCCCTACCAGCCCATGAGTGGGAGCCAGGCCCTGGTCTATGAGGGCCCGCTCAGCCAGGCGGCTGGGCTTGGCGCCTCCCAGATGTTGGACTCCCAGCTCCCGCAGCTGACGATGCCCCTGCCTGGCTCCCAGCTGCCTCTGCCCCGGTACGGCTCCGGGCAGCAGCCCCTGCTCCTGCCACAGTCCATCCAGCTGCCCCAGGCGCAGAGCCTGTCAGTCGGGGCCCCCCGCAGGATCCTTGCCCCCGGGTCCCAGCCTTCGGTCCTCAACACCAGCAGAGAGTCCTCTCAGATGGAGATGAAGGGCTTCCACTTTGCCGACAGTAAACAGAATGTTCCTTCAGGAGGCTCCGTGCCGTCACCACAGGCCTACAGGCCTAGCTCTGCTAGCCCCAGTGGGAAGCCCTCTGGATCAGCAGTTAACATGGGCTCTGTGCAGGGACACTACGTTCAACAGGCAAAGCAGCGAGTGGATGAAAAGCCCGGCCTGGGAGCCATGAAGCTGCAGGAGCCACCCTCAGCCGCTTCCCCGCTGAAGCGAACTGGAGCAATCAAGCCCCGGGCGGTCAAGGTGGAGGAGAGCAAGGCCTGAGGGGCTGGGCCCGGCCTGCCCGGGAGGACTCTGCCCTTGGCCTCGCCACCGCCTGATGCTGGGGAGTCTCACCGAGGGATCCCCTGTCCACCTGCCTGGCCCGGACTTCGAGATCTCCCTTCTCTCCTCCACTCCCGAAAGCTCCGTTGTCCAACCGGCTTGTACCCGTGGATCTCTGGCATTGACCTGCTTGCTTTAATACGAAACGAACAAGCAAATGACTCCATTCCCATCTCCTTTCCATCACGACCGCGGAGTGACCGAGCGTGGAGTGACCGAGCGTCATGCCATGCAGACTAACCCCGCCCTCCCCCGCTTCTTCCCCTCCCCGCCTCCCGTCCCCGGGCACCGTGGTCTGGCAGCAGGGCCGTTTTAGTTTGAGGCTTTTTGTTTTAAAAAGCAGCTACAGGTTTTTACAGAAGAGAAAGGAAAAGAAAACAAAGACACAAGCTTTGTATAGCTGGACTTTGTCTGTCTTTTGCCACCCTCTCGCTGGCCGCCTCCTATCGCAGTAGTTTGCTGTCACCTCCCCTGCTCGATGTGGTAGGTCGCTGCGGTACCCGCAGGGGTGATGCTTGGGAGCACACCTCTTCTGCTCTCTCTCTGCTGGTTACTCGTAGAAAGAAGTGGTTTCAGACACTGCTCCTGAGCTCAGGAAGCGGTGACTTGCGGGGGGTGGGGAGCAGGCAGGTGGACTGGCATTTCAATGGCTTCCAGCCTCTGGGCTGATGACCACAGGGAGCTTATGGTCAGCCCATTGACGTTGATGTTTTTAGCGTAAGAATGACACAGAACTTCTATCTCAGACTCTTCCTAAAGCTGGTGGGGACATTGACCACTGGGAACCTGAGGTGAATCATGAAAATAAAAGGCAGTGGTATGTCCCGTCTTGACCAGGGTGGTGTGAGCTGACAGCACCACCCACCCCCTGCCCCCCATCAGTGCCTGCTGCACCCACAGGGCCTGATGTCTTCTCATGCTCCCTCTCCTCCGAGCTGCCTTGTCTCTCTGGGTCCTCTGTCCATCCACCTCTCCTGCAGCTCAGCACTGGAAACCCCGCTGTCCTCTGTGGCGACAGGCGCCTGGACCATTGTCACAGGAGGTGACAGGTGTGGTTGGGGCTGTAGCCGCAGCCTGAGCTCTGGGAGGAGGCAGGAGGGCTTGCTTCTCTCTCTTTCTCCCCTCCCAGCTGTAGGCGCAGGCTATGGGGCCGGATAGGCCTGAGCGGGGCAGTGGGGTCTCCAGTCTTTCCAGAGGCCAGAGCAGGGCCCAAGGGGAGGTGGGCGAGTGCAGGGCTGGCAATGCTGCCGAAACAGCCCGCCTAGCCTGTTAACGTGTGCAGAGCTATTGCTGTCCAAATGTGGAGGCATTTTATGCTAAGTCTCTGTTTGATTTTAAAGTAAAAACTAGAAGGAAATCATCCTAAATTCCAAGGAAAGGTGAGGGGAAATTTGAAGTTTTGCCTATGCTCTTGAGAGAACTAAGCGCTCATCAACCTGCTGTTGCTGGCAGGTCTGGGGAAGACTTGGCTTGGAGGATGGGAAGCAGGGAGATGGCATGGCCCGCAGGGTCCGCCCGCAGCGTTGCCCCAGGTGGTGACGGCTACTTGGGCTGAGACTCGAGGCTCTGTTTGGTGCGGAATGCTGGGAAAGAAGGGCCTTAGGAACCGTTGTAGGCACTCGTTGCTCTTCGCTGTTTTAAGGAAGTGTGGGAACAACAGGCTTCTGGCAAAAGGTGCAGGGTTTCAACGGTTAATCAGTGGTGTCCAGCACTCCCCTCCTTGCCTCCACTCTCAGACCTTACTTCTCACTGGTGTGTTATTTTGTTTTTTCTTCTCCTTCATCCCGGAGTTTTTACTCTGCAGTCCTTTCTTGCAGGGCTGCCACTGGATGGAGCTCCCTGTGCGCTCACCTTCCCTTTTCTCCCTTCCCCCGCAAGCGCCTGGCTACTGTCCCCACTGAGACAGGGCTCCCCTCCCCTCCCGTGGCCCCTTCAGGGGCCTCGCCCTCACAAACAAACGTGGCCAGACCCCTCACACCTGATTCCAGTGCACATTGTCAAAGGAAAAAAGGCTTTCTCGTCTCGAAATGCAGCAGGACAGGCCTGCACACTGTTACAAACTCGTTAAGAGGTGTCCTCTCAGGGGACCTGCCCTCAGAGTGACAGTGCTTCCTGTTTGAGGAAAAAAATGAAAGGGTCACCTGTTCCCCAGCCCTTTTCTCTACCTACTCCTGTGTCCCCCCCACCCCCAGTAAAAACAAAACACTAGAATTTATTTATATGTATTGATGTCGTAGGTCTAGGTGGAAAAAGAAGTAAATGTTTCACTGCTCTATTTATATATAATGTCTGAATTATTCTGTGCAGGAAAGGCCAGGAAAATTGCATGTGAGGTTCAGTGCGTTTACCACCTTCGTGTGCCCAAGCTGTAGCCTCTTTCTGGATGAGACACAGATTTTACATTGAATTCTGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCCTTGGTCTGATGAAATGCAGTAATTAATGCAGAGATGTTTTGGGGGGCAATCTCTCTCCTTTCATGTGGTTTTAGAGCCAATCTCCAGGTAATGGGACTTGGGGTCATATTTTGCCTTCACATCTCCATCCTCAGAGTACAAATCCACACAGAGGCCTCTGCCAGAAAGCCTTGGGTCGACTAGCGCGAACACGTAAACACTAGAACTCAACAATTTTCTGCTCCTGGGCAGGGTCAGGGGTCAGAGCCCTCTCACTTGGCCTTCAGCTGCTCAGATTCCCCTGCTTTCCCATGCTGGCTGCTCCACCCTGGCCGCTGATGATGCATCCTGTTCCTCGGCAGCCAGTGACCCTGTAGCACGGTGTGTCGTCCAGCATCAGTTCCTCTATGGGTAAAACCCAAGAGCGTGAGCTCGAGTGCCCACGCGGCCTCATCCACCCCCTGAAGGCTTCTTTGCCAGCTGTATTTGGTCTGGTTTTTGTTTCCCGTTTTGAATCAATGTTACTGTTTTCAAACTTGGAATTCCTACACTTTGGGCTCCAGGTTCCTTCAGGGAGAAAACTAAAGAATGACTATTACCCAGAAAAATCGGTCGGTCCGGTTCCAAAGCCATGGTCATTGCAGCAACTTCTGGGGACACTGGGGTGTCTTGTTACATATTGACATCTGTTCTGTCCAGCTCTGCCCTCACCCTCCTGTCTTGTAGATCTGCCTTCTGGACGGTTGACGAGGTTTGCCAAGGGCTGTGGAGGCTCAGAGTGTGCACTCACAGGCATGGTCTCAGAACTGGCCCGCTGAGGCAGCATGGGGTCAGCGGCTGAAGCCCCCTCCCTCCTGTGTGGTTTCCCTTCGTCGAGTAGCTGCATGTTACCTCTCAAATCTGTATTTGTCCCATTTTTCTTCTTGCAGAGCTAGCCTGGGTTAGAAGGTCTGTTGGAAATGGCCTTCGAGCACCAAGGACGCTAGGGTACTTAAACTTAGTACTGTTCTGTGATGACTGGGAAATGCAGACTTCAGAAAGCTGGCTCTTCCAGTTTGAAAAGTGAAGCGGACCTAAGACATCACCAGGACAGGAGCGGCTCAGTGTTGGCGTTGGACGCTGTCGCCCAGCCGTGCCCTCCACCGGGACCACCAGTGCACATCTGGCCAGTGATCTTCCAGGCGCATCCAACCTGCGTTCACCATTTCTCCACCCCAGTTAGGTGACCTCCAAGAGGCAGCAGTGTCCTTGAGGCCCTGCCTTCGGCATGTTACAAAGCCTCAGAGCGGAACTCTCTGCTGAGGCTCTCTGTGGATGACCTCCTTCCATGGTGAAAAGGGGGTCCTGCACACCAAGCTTTCAACCTCATGCCTTGCATAGTAAAAAGCGTTAGGGTTTTTTTGTTGAGAGGGTTGTGTTTTTTGTTTTTGTTTCTTTTTGATCTTATTTTGGCCTTTCCTATCTTTGTCTTTTCATGTAGACCAGATATTTGAAAGGGCAGACGATGGCTAAAAGGTGTAACGTGCAGCTTGTTTCTACGTGGTTTGGGGGAGCTTTTACCTTAGATGGGAAAATGGAACCCTGGATTCACCAGGCCATGGTGGCACCCTCCTCCTTCACCCTTCCCTCCGGTTCAGTACCTGTTGTTTCTCCTTTCAAATATGTGATTGTACTAGCTCTTTCCATATGAAAGAATTCTCCTTATTTAAATAAAAAAGTTTAAAAAAAAGACCCACTGAAACCAAACAT EMBV3_15648 GATTTGGCTGCAGGAGCAGGAATCATAGCACTTAACCACATCCCAGCATTTGTTCTGAGC Gene BVT0102_038473 + 0 NULL GK000004.2:113313064-113378725 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32464 TCACTGAAGACCTTACAGCCTCAGCAAAGCCATCAAAGATCCTGAACGCCAGCTACCTCA Gene BVV0102_349948 + 0 NULL GK000009.2:104384493-104548510 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238258 TCONS_00238257 1 XLOC_144935 NonCoding TCONS_00238258 XLOC_144935 NonCoding NonCoding - 9:104515975-104518146 - TSS177943 1608 1 TCONS_00238258_2 153 2 0.259907834101383 0.00175141083681821 0.000471783003596687 0.000168358930523011 2.10069921666097e-09 0.000662714886275814 0.000106776272321584 1.43049822562559e-09 1.48303034060487e-09 0.000475942979367041 1.14847161820849e-09 5.32528758849196e-10 0 0 0 1.12150177158198e-09 0 0 0 0.000681122871098702 0.000666369229300322 0.000176526602186017 0 0 0 0.000371405969888865 0.000614494048843555 0.000369295811845214 0 0 0 0 noncoding AGGTTTAGAGAGAAGTTTGATTAGGACTCCTTCGAAGGACCAATGGAAATGAGAAGTTAGGCAAATCGCACAAAGGGAAAGGCACAAAAATACAGTAACTCCGTCTTCATTTCAGATCACATTTGTTAATCCAAACAAATCGCTCGAACTGAATTTGGATCAGCTTATTGTGGTGGCCGCGTGAAATGTCTTGCTTCGTTATTTGCATCTTTGGAGTTCTCCCCACACAGGCCAAGTGGGGCGGAGGGGAATGTAGAGCTCCCGCCTCACCCTGCTTCCTCATCCAGAAGCGAGCCGGCAGGCCGAGGGCTGAGTCAACGGCCCCTCTCAGTGCCGAGTCTAGGAGGGAGCGCTTGCCCCTCGCCCGCCACACCTCACGCGGTGAGAGCTCCACGAGTCTTCACGGACGTCATGGTGGCTGTAATTCAAGGTCGCGGGGAGCAGGCCTGCGGATCAAAGGCGGGTCTGCAACAAGACCCTCCAGTGTGGGGCTCGGGTGGAAAGGCTGTCAGTGGGTGACCCCAGACGGATTCCTGCTTCGCTTCAGTCCTGTACCTGCATCAGTATTCTTAGATCCTAAAAGCTTGTTCTGCAGGGGAATTTTGGAGCAAGTAGAGGATGGAAGGAAAAGGGGACATGTTCACTGAAGACCTCACAGCCTCAGCAAAGCCATCAAAGATCCTGAACGCCAGCTACCTCACCAGAAAGAAAAGAAGTCTTGAGAAGAGATGAGCATCACTGGCCGGTAGAATGGGCCTGGGACTTAGGAACCACACACAGACACGTCTGGTCAGTGCGCAGCATGGAGCAGGTGTCCAACTAATGGCCACTCCTGTCGTAGATTCTGCTTGGGCCGTCGATGGGAAGGGGACCAGGTGTCTGGCAGAGAATGAACACGTATAAAGCATGCCACGTGAGGAAGCAGAGACCAGCCTGGTGGGAACAGTGAACAGGGGGCTGGATGCGAAGACGCCCTTTGATCAGCTTAAACCATGGAAAGCTGCCCGCATCTGCGGGTCGTCCTGTCACCTCCTGCTCTGGGTCGTGTGAGTCCAGAGTGGCCCTGAGCCCTGACTTGGGCCCGAGGCCCCAGGCCCTGCGGCAGCCTCCTCTGTCAAGGCTGGGATGGGAGTCAGGGCAGAGAGGGCCAAGCTGCAGGCCGGCAGGTCCTCTGACGCTCATCAGAGAAGCATTTAATACCGATCAGAAATCTCACGCCAGCCCCACGTCCAAGGAGACGTCCAGGATGCAAAACTCTCCGTAGAAAATGTAACAGTCACAGCTTCACCTGGAGCATCTTCAGAAACAAGGCACAGCCGGGGCCTCACGGCCCCTTCAGCTGTAGCCTGATCATCATAACCCGTTTTAGACGAAAACCTAAAATGGCATTTGTTTTCTCTTGAGGATTCTATTTACTTCCAGCTAACCAAAGCCAAGCAAAGTGGCCGTATTGTTCTCCTCGTTATTGCATGAGTGTACAATCAAGTGCAACCCACTAGGAAATCTGTAAATGTGATACTGCTTAGAAAGTTCTCCCCAAAGTGCCTGAATTGAGAGACACAACTGGACAGCTTGAGCTGCCCAACTCATTTGTAAATAATTAGAATA TCONS_00236542 r 5' 31846 TCONS_00236542 r 5' 30731 EMBV3_04871 GGGCTGTGTCTGTGCCGTGGACAGTCCCTCGGAGTTTACTAATGTTTACAGGGCTGCGCA Gene BVT0102_036530 - 1 EMBV3_27679 GK000012.2:89331788-89339067 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041605 1 XLOC_025411 NonCoding TCONS_00041605 XLOC_025411 NonCoding NonCoding - 12:89335750-89336132 - TSS31106 382 1 TCONS_00041605_2 122 1 0 0 0.00223589978050192 2.42251869652304e-05 0 5.16981650729685e-05 0 0 0 0 0 0 0 0 0 1.28434529216176e-05 0.0019359252296314 0 6.56830015570788e-05 0 0 0 0.00631339630038029 0 0.000131659441281254 0.00126961505627476 0 0.000199395335185318 0 0 0 NM_005537.4 ING1 Homo sapiens inhibitor of growth family, member 1 (ING1), 5e-50 201 77.78 0.672774869109948 0 noncoding 0 0 0 0 0.0101233131425413 0.930142122714963 0.0524842673832756 0.472541277108945 AGGGAGGGGAGGGAGGATGGGGCGAGGAAGTCGCCCATCCGTGCTGCGCTCGGGGGGCGCAGGCAGGTACCTTCGGTTTGGAGAGGGACCTGGCAGGGGAGGGGATCTGTGCATCGTCCTCTGCAGCCCCCGCCGCCCAGACTGCCCGAGAGACGCAGGGGTCGGGTCCGCGGGGAATTGTCGGCCGCTGGGGAAACTTTGCTGCCCGGTCAGGCACGGCGCTGGGGGCTGTGTCTGTGCCGTGGACAGTCCCTCGGAGTTTACTAATGTTTACAGGGCTGCGCAGCAGGGAAACGGAAGAGCGGGGGGAGGTGGACAGCCAGGAAGAGCCCCACAACGAACCGAGAGCCCGTACGGCAAGGCGCCCCTGCGCGCTCTGCCT TCONS_00037555 . 5' 768 TCONS_00037555 . 5' 768 EMBV3_32726 CTCTCTGCTCATCCGGAGAATCACAGGAAGATCACTGGGGAACCGTTGATCCGCCGATCA Variant GeneID:280716|AK2:NM_173889:13_cdna 460^532 2 EMBV3_17212 GeneID:280716 2 GENE AK2 MGC137216 adenylate kinase 2 EMBV3_18314 GCCTTAGGGAAAAGGAGAGAAGAGAAAGGGTGGGGGATCGAGAGAAATGTTCTGGAATAT Gene GeneID:537028|MOSC1:XM_002693961:154_cdna Constitutive 2 NULL GeneID:537028 16 GENE MOSC1 NULL MOCO sulphurase C-terminal domain containing 1 EMBV3_09960 AAGCGATCCAGTGCGAGGTGCGGAAGATGTGCAACTACACCAAGATTCTGTCCACCAAGA Gene BVV0102_276870 + 0 NULL GK000024.2:45118256-45383605 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140377 TCONS_00139157 TCONS_00140375 TCONS_00140379 TCONS_00139154 TCONS_00139158 TCONS_00140376 TCONS_00140378 2 XLOC_085116 XLOC_084814 Coding TCONS_00140375 XLOC_085116 NonCoding NonCoding SETBP1 24:45140939-45141713 x TSS104789 416 2 0.464424320827943 0 0 4.44902953269392e-05 0 0.00010681404637622 0 0 0 0 0.000531354507147829 0.000227879251484038 3.07835275998988e-54 6.74105160467855e-16 0.00233701475761166 0.00046167890151342 0.000145219646230792 0 0.000516351974907675 0 3.45740123465706e-05 0 0.001205597865591 0.000522584931956178 0.0010149096883482 0 0 0.000112676016953146 0.000103506459983526 0.00105886123565101 0.000338732757672787 XM_003583981.2 SETBP1 PREDICTED: Bos taurus SET binding protein 1 (SETBP1), transcript 4e-71 271 100.00 0.358173076923077 XM_005258243.1 SETBP1 PREDICTED: Homo sapiens SET binding protein 1 (SETBP1), transcript 3e-60 235 94.67 0.358173076923077 0 noncoding 0 0 0 0 0.164354579274711 0.4321161168339 0.0178746746637394 0.7469450840886 GTGGCGGGGGCGCCTGCTGCGGGGGCTGGGCCGGAGGCTGAGCCGCTTGGCCTTCAGGATCTTGTTCACGTGGTCCAGGTTCTTCTTGGTGGACAGAATCTTGGTGTAGTTGCACATCTTCCGCACCTCGCACTGGATCGCTTCGATCTCCCGCCGCTTAAATCGCTTCTTCAGGGAGGAGCTGGCTGCAGGAAGGGAAGAGAGAAGAAACTGATCACAGGATGCAGGCTGTCTTAAACCCAGGCTTTTCAGTGACAACTGGCATTATATTTGGCTATGAAGATGATGGAAAGTTGATGCTATGACTCAGTACCCACTATTCTTTTTTTATTAAAATTAAAAAAAAATAGACATAAACATGGGTTGAATAGTATGTGTACAAAGTATATCATTATTTCGGTCTCCACAGAAATCCC TCONS_00139158 TCONS_00139158 r 5' 0 TCONS_00139158 TCONS_00139158 r 5' 0 EMBV3_32585 CAATGCAGAGCTCCTGCGCTATTCCGAGAGTTTACAAACCAAGTGCTCCGCAGTTCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29603 TACCACTGAGGCAATGATGTGGTCAAGGAAGTTGGGTAGGCTGGCCTTGTTCTTCACTCC Gene BVT0102_085788 - 1 EMBV3_29726 GK000007.2:51349771-51411291 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213412 TCONS_00213414 TCONS_00213409 TCONS_00213410 TCONS_00213413 TCONS_00213411 1 XLOC_130448 Coding TCONS_00213409 XLOC_130448 Coding Coding LOC100848816 7:51359809-51419436 j TSS159873 6471 1 TCONS_00213409_10 1599 24 0.89187602723644 0.000461894452640948 0.000700825756112483 0.000750097356855773 0.000201671081917532 0.000504338525471763 7.60726129042711e-05 6.00484800654301e-05 0.00012619744627987 0.000827465817796847 0.000256524093054723 1.34428107665344e-05 8.44382201209727e-06 3.7441921617896e-06 0.00038353509976164 4.91873061339667e-06 0.00928952230354128 0.000685362183681507 0.00315337087087513 0.000160621804452684 0.000520477013190821 4.85948857462826e-05 0.00179235395597851 0.00167646453768387 0.00236993067990848 0.000524814274424724 0.000442094121210073 0.000288237702202486 0.000795073756839295 0.000739149417285338 0.000735014776630893 XM_003582422.2 KDM3B PREDICTED: Bos taurus lysine (K)-specific demethylase 3B (KDM3B), 0.0 1.161e+04 100.00 0.995054860145263 NM_016604.3 KDM3B Homo sapiens lysine (K)-specific demethylase 3B (KDM3B), mRNA. 0.0 9355 92.21 0.994745788904342 TCONS_00213409_10 sp|Q7LBC6|KDM3B_HUMAN KDM3B_HUMAN Lysine-specific demethylase 3B; 0.0 3148 96.51 0.999374609130707 0 coding 0 0 0 0 -0.0419130026303577 0.785037199213295 0.00662784414745146 0.903062477140028 GGAGTTGTCACCTATCCTGGAAACAAAATCTTTGTAGAATTTGATGGCTGTAACTGGAAGCAGCACTCCTGGGTTAAAGTTCACGCTGAAGAAGTTATTGTACTTTTGCTGGAAGGGTCTCTAGTATGGGCACCTCGGAAGGACCCAGTCCTCATCCAGGGCACTCGAGTCTCAATTGCACAGTGGCCAGCCCTGACTTTCACTCCCCTGGTAGATAAACTCGGTTTGGGTTCTGTGGTTCCAGTTGAATACCTTCTGGATCGAGAGCTTCGTTTCCTGTCAGATGCTAATGGGTTGCATTTGTTCCAGATGGGAACAGATGGCCAAAACCAGATTCTTTTGGAACATGCTGCTCTGAGAGACACAGTTAATGCTTTGATCAGTGACCAAAAGCTACAAGAGATATTCAGCCGAGGTCCCTACAGTGTTCAAGGTCACAGGGTCAAAGTGTACCAGCCAGAGGGAGAAGAAAGTTGGCTCTGTGGTGTTGTAAGCCATCAAGATTCCATCACCCGTCTTATGGAAGTGTCTGTAACTGAGAGTGGTGAGATCAAGTCCGTAGATCCCAGACTGATCCATGTGATGCTCGTGGATAATTCGGCGCCTCAGAGCGAGGGGGGTACGTTAAAAGCAGTAAAATCTTCCAAAGGAAAGAAGAAGAGAGAGAGCATAGAGGGGAAAGATGGCCGGAGGAGGAAAAGTGCTTCGGACTCTGGGTGTGACCCTGCATCAAAGAAATTGAAAGGAGACAGGGGTGAAGTAGACAGTAATGGGAGCGATGGAGGCGAGGCAAGCCGAGGGCCCTGGAAAGGAGGGAATGCCAGTGGAGAGCCAGGGCTGGATCAGAGAACCAAGCAGCCACCGACTACATTTGTCCCCCAGATTAACCGCAGCATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGCCTGTGGGTGGGGACACACCTCTACCTTTCACTCCGTATTCTGCAGCCACAGGTCAGACACCTTTGGCCCCAGAGGTGGGTGGAGCCGAAAATAAAGAGGCAGGAAAAACACTGGAACAAGTTGGCCAGTGTATGGTGGCTTCAGCAGCTGTGGTCACTACCGCCAGCTCCACCCCAACCACGGTGAGGATCTCAGACACTGGCCTTGCAACAGGGACTGGGCCGGAAAAACAGAAAGGCAGCTGGTCGCAGGCCCCAGGAGAGAATTCAAGGAATTCTGTCCTGGCCTCTTCTGGATTTGGAGCATCACTCCCGGGTTCATCACAAGCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGGGTTCTTGCCACAGAGAACAAACCTTTGGGCTTCTCTTTTGGCTGTAGCCCAGCACCAGAGTCTCAGAAAGACTCTGATCTCTCCAAAAACTTGTTTTTTCAATGCATGTCCCAAACTTTACCCACCAGTAACTACTTCACTACCGTTTCAGAGAATTTGGCTGATGATTCCTCCAGTCGAGACTCATTTAAACAAAGCCTTGAGAGCCTCTGTAAAGGAAGATCCACTCTTGGAGCAGACACTAAATCAGGCTCTAAGGCTGGCAGCTCTGTGGATCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACGCCAGCCTTCCCACGGAGCCTCCTAAATGCCCGCACCCCAGACAGTCATGAAAATCTATTTTTACAGCCCCCTAAACTGTCCCGAGAAGAGCCTTCTAACCCTTTCTTGGCATTTGTGGAGAAAGTTGAACACAGTCCTTTCAGCAGCTTTGCATCTCAGGCATCAGGTAGCTCTTCCTCTGCTACCACTGTCACCTCCAAGGCAGCACCCAGCTGGCCCGAGTCTCACTCCTCTACAGATTCAGCATCTTTAGCAAAGAAGAAAACCCTCTTCATCACAACTGACTCCTCCAAACTGGTGTCTGGTGTTCTGGGCTCAGCTCTTACCACTGGGGGGCCAAGCCTCTCTGCCATGGGGAATGGCCGCTCCAGTTCACCCACCAGCGGCCTCACCCAGCCCATTGAGATGCCTACTCTCTCCTCCAGCCCCACAGAGGAGAGGCCAACTGTGGGGCCTGGGCAGCAGGACAATCCTCTCCTTAAAACCTTTAGTAACGTCTTTGGCAGGCACTCAGGCAGCTTTCTGTCCTCCCCAGCAGATTTTTCACAGGAGAACAAAGCTCCTTTTGAAGCTGTGAAAAGGTTCTCACTGGATGAGCGAAGCTTGGCTTGCAGACAGGACTCAGACTCCAGTACCAATAGTGACCTGTCAGATTTAAGCGACTCTGAGGAGCAGCTCCAAGCCAAGACCGGTCTAAAGGGGATTCCGGAACACCTGATGGGGAAGCTGGGCCCCAATGGGGAACGCAGTGCTGAGCTGTTGCTGGGAAAAGGCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGACTGCTCCCTTGAAAGTGGGCCAGTCAGTGCTGAAAGATGTGAGCAAAGTAAAGAAGCTGAAGCAGTCCGGAGAGCCCTTCCTGCAGGATGGGTCTTGCATCAATGTAGCCCCTCACCTGCACAAGTGTCGTGAGTGCCGCCTGGAGCGGTATCGGAAGTTTAAGGAGCAGGAGCAAGATGATTCCACTGTGGCCTGCCGCTTCTTTCACTTCCGGAGGTTGATCTTCACTCGAAAAGGGGTACTCCGAGTGGAAGGGTTTCTGAGTCCCCAGCAAAGTGACCCTGATGCCATGAACCTGTGGATTCCCTCTTCCTCCCTAGCAGAAGGAATAGACCTAGAAACCTCAAAATACATTCTGGCCAATGTTGGAGACCAGTTCTGCCAACTTGTGATGTCTGAGAAGGAGGCCATGATGATGGTGGAGCCACACCAGAAAGTGGCATGGAAGCGAGCGGTCCGAGGTGTACGGGAGATGTGTGATGTATGTGAAACAACCCTCTTCAACATCCACTGGGTTTGTCGCAAATGCGGATTTGGGGTCTGCCTTGACTGTTACAGGCTCAGGAAAAGCCGACCGCGCAGTGAGACAGAAGAGATGGGTGATGAAGAGGTTTTCTCCTGGTTGAAGTGTGCAAAGGGGCAGTCCCATGAGCCAGAGAATCTCATGCCCACACAGATAATCCCTGGCACAGCTCTTTACAATATTGGAGACATGGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATTAGTCGGCAGAACAAATCTGTGTTGAGACCTGCTGTCACTAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAATGAAACCACCTTCTCAAGCGGAGGAGGAACTGCACCGGGAGCACAACCAGAGACAGACCATGTTCCCAAAGCCGACAGTACTGACAGCAGATCAGATGAGCCTCTGAAAGCAGACAGTTCGACATCAAATAGCAATAGTGAGCTAAAAGCCATCAGGCCCCCTTGCCCTGACACAGCCCCACCCTCCTCTGCCCTGCACTGGTTGGCGGATTTAGCAACTCAGAAGGCTAAAGAAGAAACAAAAGAAGCAGGGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGATTCGTTCAACTCCACTGCAAAGGTCTCTCCGTTGACTCCAAAGCTTTTTAACAGTCTGTTACTGGGTCCCACTGCCTCCAACAACAAAACTGAAGGCTCTAGCCTTCGAGACCTCCTCCACTCCGGGCCAGGAAAGCTTCCTCAAACCCCCTTGGACACAGGCATACCCTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAACAAGGCCAGCCTACCCAACTTCCTTGACCACATCATTGCCTCAGTGGTAGAAAATAAGAAAACCTCAGATGCTGCAAAGCGGGCCTGTAACTTGACTGATACCCAAAAGGAAGTGAAGGAGATGGTGATGGGGTTAAATGTGCTGGACCCCCATACCTCTCATTCCTGGCTCTGTGATGGAAGACTTTTGTGTCTTCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCCGGGAGTGTTGGAAGCAAGGCCAGCCAGTGCTGGTTTCAGGAGTACATAAAAAGCTCAAGTCTGAACTCTGGAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCAGGATGTGGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTCTGGGATGGCTTCGAGATCATATGCAAACGATTAAGGTCAGAAGATGGGCAGCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGGGGAAGATTTTCGGGACATGATGCCAACAAGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAGCGAGATGGCAGGCTCAATCTGGCCTCCAGGCTACCCAGCTATTTTGTAAGGCCCGATCTGGGCCCCAAGATGTACAATGCCTACGGCTTGATAACAGCAGAAGACAGAAGAGTTGGCACAACAAATCTTCACTTAGATGTGTCTGATGCAGTTAATGTGATGGTGTATGTTGGGATCCCCATCGGGGAGGGTGCTCATGATGAAGAGGTTCTCAAAACAATTGACGAGGGAGATGCTGATGAGGTGACAAAGCAAAGGATTCATGATGGAAAGGAGAAACCCGGTGCTTTGTGGCATATCTATGCAGCCAAGGATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAGCAAGGCCAAGAGAATCCCCCTGATCATGATCCAATTCATGACCAAAGTTGGTACTTGGACCAGACCCTACGTAAGCGGCTCTATGAGGAATATGGTGTGCAAGGCTGGGCCATTGTTCAGTTCCTGGGAGATGCTGTCTTCATACCTGCTGGAGCCCCACACCAGGTGCACAACCTATATAGTTGCATCAAAGTCGCAGAAGACTTCGTGTCTCCAGAACACGTAAAGCACTGTTTTCGCCTGACGCAGGAATTCAGGCATCTCTCTAACACTCACACAAACCATGAGGATAAACTGCAGGTGAAGAACATCATTTATCACGCAGTGAAAGATGCTGTTGGCACCCTCAAGGCTCATGAGTCCAAGCTGGCAAGATCGTAGGCGTGGAGAAATTTCAAACTCCCCTGTGAAGCAGGTCTTTCACTCACAACACATACAGGGAACGACAGGGTTCTCTGCTGGAGCAGAGGTCCTTCACTTGGAGCCAGTGTGGTCAGTATTACAAACTCTCCAGCCACTCTTTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGCACTGTTCACACACACAGTTTCAGACTCCAAGCCGAGGGTGCCACATCCCTATCCTGTGGCCTTTTGGGACTTCAGATTGCCTGAACATCACTGGGCTGTCCTGCACATTCTCATGATTTGAGATTTGTGGAAACCAGGAATGTGGGCACACCTTTCTTTTTTTTTTCTCTTGTGCCTAGTTAAGTGGGAATGTGTTTGGAGGTAGGGGGAAATCACATACCTGGTACATGTGGGGGCTAATTGTTTAAACACGCCTGGTGGAAGCCTGATGGTGTCTCTACACATGACCTCTGACACAGCCCATCCCAGGAGATGGGTGAAGCCATTCCCCACCATCTCTCTCCCATGAACACTGAAGTCTTGAAGGACCCAGGGAGAATCCACTGCTTTTCCCAAGAGGCTCCAGGATTAGGAAACGTGTGTATTTAGTGAAAAATAGGTTTGTAGTGAAATAGTTACTATTTCATGAAAGTAGATATTTTTAGAACTTTTGAAATACCACAGTTTTTTTCCTGGATTATGAGGAAAGGCACATTACATTTAGTCTTCCTTCGAGAAAACTCTTTGAAGAAATAAGATTTTTAGAAATCAACTGCCCATTATAGCACAAAAATCAGCCAAAGCAGAATTTAAAAGAATTGGCTTTTTAGGGTTCTTTTAATTTCACCCCCCTCCCATCTCAGCCCTATCTTGAGGGAACAGCCATCTTGAGAAAGAACTTTGTCGTGTCTGAGCTGTGGTGTGTTCCATGCATACACACACTGGTGACTCCAGGAACCATTTCCACCTATTACCAGCGTTCCCTTGGGACTCCTCTTGTAGTTCCAAATTCAAAGGAAAGTTTGCTTTCCTACATGAGGCGTTTTGTTTTGGGAGTTTTTTTGTCCAGAAATATTTTCAGCAAAACTTTCCAACTCAGTGGAGTTTTATTAAGAATTTATTTGAAAATGATGGAATTCATTGGCCCATAGATACATTGGAAAATGTATCTATCTTCTTCCCAGCTGTACTGTAGTGCCCTGCAGGCTTGTTTATATGTTCACAGTTACTTTTTTTTTTTTTTAATAAAAGTCATTTACTGTAGAATACTTTTAATTTCACTTTCTGTATTTTAATTTTGTTGAAGGGCTGATTGGGATTTCCATGTTCTTATTAAAAATCTAACAAATCTGTTCATA EMBV3_24289 CCTGCAGTGCGGTGTGCTCCTGGACCTTCTTCAGCTCCTCTTCAAATGATGCCAAATATT Gene BVT0102_119007 + 0 NULL GK000008.2:62978426-63070674 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225604 TCONS_00225601 TCONS_00225602 TCONS_00225603 1 XLOC_137793 Coding TCONS_00225603 XLOC_137793 Coding Coding LOC100847289 8:62985584-63051177 j TSS168861 5202 1 TCONS_00225603_6 1733 41 0.921316623978534 4.29377344942902e-09 3.09593727140865e-12 2.23137351690749e-05 0 1.31482751568117e-06 1.90268654245282e-06 4.67505063880821e-06 0.00011481715815708 9.07479550814869e-06 0 1.31267136658226e-06 1.02770547890636e-07 0 7.01645261399218e-13 6.55451956508519e-08 1.31642714837725e-05 1.59044783342636e-05 0 2.75458618293749e-05 2.13010107305964e-05 5.37848237888188e-06 0 0 0 2.41580303074732e-05 9.5280709329428e-05 1.90293059767908e-05 0 0.000102060936419873 0 XM_005210188.1 CCDC180 PREDICTED: Bos taurus coiled-coil domain containing 180 (CCDC180), 0.0 8835 99.98 0.942522106881968 NM_020893.2 CCDC180 Homo sapiens coiled-coil domain containing 180 (CCDC180), mRNA. 0.0 3651 81.68 0.725874663590927 TCONS_00225603_6 sp|Q9P1Z9|CC180_HUMAN CI174_HUMAN Uncharacterized protein C9orf174; 0.0 1066 66.14 0.505481823427582 2 coding 0 0 0 0 -0.0760210934489906 0.623408152467106 0.0218471611601331 0.776267164556806 ATGTCAGACCTCCAGCCTCCACTCAGCCCTGATGAGCAGCTCCTGGCTTTATGGTACTTGGAGGTGCTCTGCCCAGAAGAAAGGACGTCATGCACTGAGGAGAAGTTCCTGAGGTTTGGCACTCCTGGGGACGTTGAGGTTGGACTCGCCCTGGCTGGCTTGAGTGGTACTTTCTGCAGGTGTGGCCGCAGCCGGGCCCCTGAACACAGGGCCTCGCTCCACTTCGTGGGGCTTAGAGGGCCTGTCCTGAGACCGCAGCCGCTCCTTGGTGGGCTTGGGGAGCAGGCACAACGGCTTCCCTGCAGGGGTGTCCAGCTCGACGCCAAGATGTCTTCCGTGTGGAAGGTGACCCAGATTCCCAGCGGGAAGGTCTACCAGCAGATCTTCGAGGCTGAGGTGCAGCTGGTCCGCTCCCTGGCATCCTCTAGGAAGCGAGCTGTGGAGCGTTCCATGATCCCAAAGGACAGCAGGAAGCCCTTGGTGAAGAAGGTGGATGTCTGTGAAGGCGAGATGATGTCTCCTCGGCAGCGGAAGTGGATGCGCAGCCTACCCAATGACTGGACCACAGAAAACCCTGTTCTTTACAGGGAAAAGCAAATAGCCAAAAAGGAAAAAGCTCAAGAGAGTGAGAACGCCATCGACGCCAGAGAAGTCCGGGGCCTCACGGACACCATTGTTCCTGAGAGGATCAGCAGCACCACCTTTCAAAAGCAAGGAGATTCCAAGAGGAGGGGCTACGAGAGTGCCCTGGCGAGCTTTAAGGAGGAGATCGCTCAGATTGGGATGGAAATGGAACCTCTCATCTTGGAACCAGGAGCACTTCTTTTAAAAAAGCTGGCTGAGTCTGATGAGGATGTGAACAATCTCTTCAAAAAGGTGGAAAACGACAGCAACCTCGAAGACTACACCATCCAAACCCTGTTGGAGCTGAGGGATCAGGTGGCCGAGAAGTTCCTGCTGCAGAAGCAGGAGATCAAGGAGCTGGATGAGACACTGCACTCACTTGAGTTCTCCCGGGTAGATAAACTAAAAAGCGTGTTGAAGAAATATGTGGAAATCATAGAGAAAACTTCCTACCTCATGCAGCCCGACGTGTATAGGCTGATCAATAAAGAAGCCATGATCATAAACCACGCCCTGCTGGGCAACCGGAGGGCTCTCGCCAAGCTGTTCGTCAACCTGATGGAAGCCAGGCTGCAGCAGGAGCTTGATAGCCACCGCCGCTGGCAGGGCCTGATGGATGCCTGGAAGGCTCTCAAGAAGGAGTATCTGGTGCAGGATTTCAGTGAGTTCATGGCCAGTGAGAGAATCCAGACTCCTCCGGCTGTGAAGAAAGAGCTTGAGACCATGATGAAGAACCAGAGCAGCCTGCAGCAAAAGCGACTGGACCATCTGTGCACCATCTGTGACCTCCTGCCCCCCAATTACAGCAAAGCTCAGCTAACGGAATGGCGTTCTTCTCTCGACTCGTTGAACAAGCACATCGATGCCTACCACATGGACTGCATGATGCGGATCCGCTTGCAGTACGAGAAGATCTGGCAGGAGTGCCTAGCCCAAGTGCAGAAGTGCAGGAAGCAGCTGCTGGACTGGAAGGCCTTCACTGAGGAGGAGGCAGAGAGCCTGGTGAGCCCATCCTTCTTCCAGATGGTGGGATGTCTCCAGAGCAAGGTGGAGGAGGAGCTGGAGGTCTTGGACAAATCCTTCGAGACCGTGGCAAAGCAGACAGAGCAGCAGAGCTCAGACCTCTTCAGCTACTTCCAGGAGGCCGTGAACCTATGGGAGACACATCAGAGTGTGCTGTTGATGCAGGAGATGGAGCTCGAGAAGAGGATGGAGCAGCAGCGGCAGAAGCACAGGCGGGAGAACCAGGCCCAGGAGGCTCATCTTGACAAGCTCTTGGACCAACTGAGGCAGCAAAGCTATGAGAATAACCTGAAGTCACACCTGGAAAAGGCCAAGGATTTTCTGAAGAATATGCAATGCAGGTATGAGGCTTTTCATGGCCTCCTGACAAAGGAAGTGATGGAGTACCCAGTGATCATACTGAAGGAACTCAACTCCTACAGCTCCCACCTCAGCCGACACTTCTGTGTTCGTGAAATCTTTGAACAGAACTTGGAGGGAGAAGTCATTTTCCAATTGAGGGAACCAGAGCCACATGAAAAACAGTTCCAGAAGAGAATGAGAAGACCGAGAGGAAAACGAAGGTCCAAAGCAAACGCCCGCAAAGGTGACGAAAGCAACAGTGGGAGAACGAGTTCCCTCAAGCCAGCCGAAGAGATAGAAGAAGAAGAAGATCAAGAGGCCGAGTCCTCCACCACACAAGAGGTGGCCGTGAGCCCACAGGAGAAGTCCGTACTGAGTGAAGAGATGGATGAATCCAGGGAGGACTCTATTTCAGGACTGGAAGAAATACAGGTTGAAAGAGACAGCTCCTTGAGATCACCCCCAAACCAGGCCAGTGTGATAGTTCACGAAGAAGAAGAGGAGGAGAAGAAGGAAAAGGTGGAGGAGGAGAGGGAGGAGGAGGAGGTGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGAAGGAGGAAGAGGAGGAGGAGCGGAGGAGCTTGTCTGTGGATGAGGTCAAAGCCCAGGAGGAGAGTCTAGGGGAGATCTCCCAGGAGGAGATGGAGTTCTTCACAACCTCCAGTGGGAACACTTACTTTGTTTTCCTACCCCTGAAACAAGAAGAGAACAGCAAGACACCCCACTCCAACCTTCCTGCCACTCTCTTCAAGGACATTTCCAGTGCCAGGGTCTTAGAAGAAGTGATCATTCCATCCAGACTAGTTTTAGAGATTAAGAAACAGCTTCGAACTGGCTTTTTTGAGCACTTGGAGAAATGGTTTGACCAATGTGCCCTCAATGCTCGGGTCATCGTGGCCAGCAAGATTGATGAGCTGGATTCAGAACTGGAGCTGCGTCTGCACCTGCACCAGCCAAGAGCCCAGCACGTTGAGAAGGACATCCACAATGTCAGAGCAGCTGAGCTCTTGCTTCATCAAGAACGGCTGAACAGCCACTGTGCAGGGGTGATGGAGACACTGAGGAAGGAGAGGATGATGTTCTGCCAGTTCCAAGAAGAGCAAAACTTGAAGAGCAAACACTTCCGCCGCAAGATTTCTGACATGGAGCACATCTTCTTGAACGCCACCAAGAGCCAGAAGCTGGCGACTCTCAGCAGCACTCTGCAGCGGGAGCTGCTCAGCTACGTCGACGTCATCCAGGTGTCCCTGCGCAGCTTCCGCCAGTACCTGGAGGAGAGCATGGGCAAGCTGCGCTACACCAACATTGAGTTCATCAAGCACTGCAGATTGTTTTCAGAGGGAGGCAACTTCTCTTCTGAAGAAATTGACTCACTGTGTCATCGACTAGAGAAGGAAGCTGCCCGGATAGAGTTTGTTGAAAATTTAATCATGATCAACATGGAAAAGATGGAGAGTGATTACCTGGACCAGGCTAATGAGTTCATCAGCAAGTTTGAAAGTAAATTCCATAACCTGTCTGTGGACCTTATTTTCATAGAGAAAATCCAGCGCTTGCTGACAAATTTGCAAGTAAACCTCAAGTGCGAGGTGGCAAAATCCAATTTGCAGACAGAGGGATTAAATTCTTCTCTAGAACAGCTTCAAAGCAAGGTAGAAATGTGCCGAAGCTTAAAAAGGAATAAACAAGTAGTGAGCACAGAAGACCTCCTTGGCCTTATTCGAACTTGGAAAGAAAAACTGAGCCAAAGGATTGAGTATCTCAACTGCAAGCTGGACATGTTATCCATGACTCACCTGGCCTTTCCTGACAACGTCTTGACTGACCTGGAGGTAGATAGTGACATCTTGTTATCTTCAGAAGTCTATGAAGAAGAGGCTAAGGTAGACATGGTCACCCCTGAGTCCTTTGCCCAGCCAAGCCGCATGGGGAAGTCCATGATTGAAGACCCAGCTGTGGAGGTGGTCAAGAGGATCCTGCAGTTTCCTGACTCAAAGTCCTCAACCCTTCAGTGTGACAAAGAACGCTCCCAGACAGCCTTGAGGCGACTCCGGAACCGAGCAGAGCACTCCTTGAAGAAGGACTTGTCCATCGCCAGTGCCACCTCGGTAGCAAGCGTCACGCGGTACACCAAGCCCAACCGACTGGATAGAAAGTACCAGGTGCTCGGTGACAAGCCTCCTCCAGCAGAGGATTTTAAAGGCATCGTCCTGAGCCTGCTCTGGGAGAGCAACGAGCACCTGCTGGCGGTCGCGGAGGAGTTTTACCGCAAAGAGAAACGCTCAGTCACCAGGCCCGACTGCATGTACGAAACCTTCGACCAGTGCGCGGAGAACATCTGCAAAAAGATCCTGGAGTACCACAGCCAGACAGACGATTACTACAACTCCTGCCTCATAGAATTACGGGCCCAGATGAGGAGATTTGAGGAGCTTCTGCCCCAGGTGTGTTGGCTGGTGATGGAGAATTTCAAGGAGCACCATTGGAAAAAATGTTGTGCTTCCACCAAAGAGATCAGAGAACAGTTCTTGAATTACCAGGAAGAGCTGGAGAAAAGGAAGGATGAAAATGCCCAGAAGCTCCACCCAAATCTCGGACACCCTGCACAGCTCCAAGATATGGAGTCTCTATGTCAAGTGGAAGAGAAGAGGCAGGGAGATTTGGACGCCTTGATTGTGGTAACCAAGGAGAAGCTGGAGGAATGCACAAGGAAGTACGCCCGGTTTTTCATAGCCACCTTGGCCACCTTCACCGAGAAGTTCCTGCTGCAGTTGGATGAGGTGGTCACCATTGACGATGTCCAGGTTGCAAAGATGGAGCCCCCCAAACAGAAAACTTCAATCCTAATACGGAGGAAACTCACCGGGCTGTCCCTGGAGGAAGAGAGTGAGAAGCCCCTGATTGAACGGGGGAGCAGAAAGTGGCCAGGAATCAAACCTACTGAAGTCACCATCCAAAACAAGATTCTCCTCCGGAAAACACCATGTATCACAACCACCAAAACAACACTGGGCCACCTGGCATCTGTGGAAGCCCGAGATGCTGTCTACCTGAAATATTTGGCATCATTTGAAGAGGAGCTGAAGAAGGTCCAGGAGCACACCGCACTGCAGGTGAAAGAGGCTCAGCGCTGGAAGGACAGCTGGAAACACTCCGTGAACATCATCCAGGGCCTGTACTTGTGA EMBV3_01334 CATTCTACTTATAGTCTATGGTAGTTTCAGCCCTGGCCATGGGTCTCTGTGTCGCCATGA Variant GeneID:535156|LOC535156:XM_002694525:452_cdna 351^751 1 EMBV3_42154 GeneID:535156 17 GENE LOC535156 NULL similar to signal peptide peptidase 3 EMBV3_31002 TCATGAAGGTGCCCTAACTCCCTTCCTCATGATTCCTGCTCAGAAGCACTGTGTCGGATC Gene BVT0102_282470 + 1 EMBV3_15681 GK000009.2:61743749-61758419 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235665 TCONS_00235662 TCONS_00235663 1 XLOC_144276 Coding TCONS_00235662 XLOC_144276 Coding Coding RRAGD 9:61644176-61746169 j TSS176579 3949 1 TCONS_00235662_1 333 0.033932641174981 7 0.961349909796847 0.000504001325826226 0.00205867956710817 0.000859157489675437 3.66612652623261e-06 0.000421175858804123 0.000335048832280926 0.000696348301551125 4.11233143167284e-08 0.00133727676868192 0.000301078302604197 0.0001799008952678 6.68491451993573e-05 1.50392312724896e-09 0.0021841797394142 0.00110899670201783 5.42809971061948e-07 7.75454517740823e-12 5.05660835563586e-06 7.82316392128464e-07 0.00182035527241658 0.000370263664494375 0.000380277156331272 4.37506611153133e-05 8.98036361593543e-07 0.00142899674510365 0.00171350509304232 0.00137176473929194 3.84765672215674e-05 4.81206707988701e-07 3.96574194838625e-06 NM_001192828.1 RRAGD Bos taurus Ras-related GTP binding D (RRAGD), mRNA. 0.0 2637 99.93 0.370726766269942 NM_021244.4 RRAGD Homo sapiens Ras-related GTP binding D (RRAGD), mRNA. 0.0 2654 82.33 0.665484932894404 TCONS_00235662_1 sp|Q9NQL2|RRAGD_HUMAN RRAGD_HUMAN Ras-related GTP-binding protein D; 0.0 685 99.70 0.996996996996997 1 coding 0 0 0 0 -0.228951501060933 0.198526622741666 0.0115549440370906 0.842612905036127 CCTCGGCCCAGCGCCCCAACGATCTGTGCCTGCACCCGGGAAAGCGCGCTCGCTCCCGTGCGGGTTCTGGACTTTAGCGACCCCTTCAGCACAGAGGTAAAGCCGAGGATCCTGCTCATGGGCCTAAGAAGGAGCGGCAAGTCATCCATCCAGAAAGTCGTCTTTCATAAAATGTCTCCCAACGAAACTCTGTTCTTGGAGAGCACGAACAAGATCTGCCGGGAGGACGTTTCCAACAGCTCCTTTGTTAATTTTCAGATTTGGGACTTCCCAGGACAGATTGACTTTTTCGACCCTACCTTTGACTATGAGATGATCTTCCGAGGAACAGGAGCACTGATATTTGTCATAGACTCCCAGGACGATTACATGGAGGCCTTGGCCAGGCTCCACCTCACAGTGACCAGGGCCTACAAAGTCAACACCGACATCAACTTTGAGGTGTTTATTCACAAAGTGGATGGTCTGTCAGATGACCACAAAATTGAAACCCAGAGAGACATTCACCAGAGGGCAAATGATGACCTTGCAGATGCTGGGCTAGAAAAAATTCATCTCAGCTTTTATCTGACAAGCATATATGACCATTCAATATTTGAAGCTTTTAGCAAAGTGGTTCAGAAACTGATTCCACAACTTCCCACCCTGGAGAATTTGCTAAACATCTTTATCTCAAATTCTGGAATTGAAAAGGCGTTTCTCTTTGATGTGGTCAGTAAGATTTATATTGCAACAGATAGTACCCCTGTGGATATGCAAACGTACGAGCTCTGCTGTGACATGATCGATGTGGTCATTGATATTTCGTGTATTTATGGCCTCAAAGAAGATGGAGCAGGAACCCCCTATGACAAGGAATCAACAGCCATTATAAAGCTGAATAATACAACAGTTCTTTATTTAAAAGAGGTGACAAAGTTCCTGGCTCTTGTGTGCTTTGTCAGAGAGGAAAGCTTTGAAAGAAAAGGGCTGATTGACTATAATTTTCATTGCTTCCGGAAGGCCATCCATGAAGTTTTTGAGGTGAGAATGAAAGTAGTGAAATCGCGAAAGGTTCAGAATCGGCTGCAGAAGAAAAAAGGAGCCACCCCCAACGGGACGCCTAGGGTGCTGCTGTAGGTGAGGTTTCAGGAGCATCTTTTGAAATCAGACGTTTCATTGAAGCTGCTGCTACGTGTTGCACTAAAGGAAGAGGAGGAAGAAGATTGGGACACAAGACATACGTTTGTTGTAAAAAACTCAAGAAGAAGAAGGAGATTGGGACATATGACATACGTTTGTTGTAAAAAAAAAAAAAATCCTGCCACCCTTTCTTTTAATCTTCTCTTTTTTAAATAAAGTAAGCACTTTGAAGCAAAAACTTGTATATTAACAATGAAGTGAAATCTACTGTTACTTCATTACACAAATGTAAACTTTTATGGTCTGTAGTCAGAAAAAATCCTGTGTTCGTACTGCCAGGAACTGTATATATTTTGCACTTTTTCATGTTTTCTTTTTCTCATGAAACTAAACTTTGATAAAACAACTTTTCTAAGCTTTGTTCTGTCCTTGGTGTCTAGGACATGCATACTGAGTCCATATCTATGGGGCAAATGGAAATTAATCAAAAAGTGATGGATAAGCAATGACTTTTTTAAGCATGAGAATCTTTGCTACCAATTGTTGAGAAAAATCATTTTTCCATGGAGGAACAGCTTGGGGCGGCAAGCTCCAGGAGCAATAAGACCTGTCCCCTGTTTATAATGGATATAAATAGAAGTTTTATAGAATAATATTAGCACCAAACTTATCTAAACATTTCTATAGCTCTGAGAGTGCTTCCCTACCTGACAGTTTTTATAAAACTCTTTACCTCAACAGACATCTCTAAACTCATTTTATACAGAGAGGTTCTTTCTTTCTGTTGTGTTACTGTTGTCCTTTGGGACCATCTTTCCAAAATGGTGCCCATCACTGGAGAGAAATTGAAATGTCGCTGAATTGCAGGGTTTCTGAAGGCTTTTCTGTACCTGCCACCCAGGCTAAAGTAATATCAGAAGCTACGTGGTTTCCCAAATGGAGGTGACTGGCAATTGCAGATTTAAAAATACATCCTATACAATTTTTCGCCTCTGTGGAATGGGCCTCTTGCCATGCAAGAATCCAAATGTTTATTTAGGACCAGTTTCTTTCTTTCTTTTTTTTACACTGCTCCACAACCACAGGCAATATTTCAGTTCTCTGCCACAGAACTGAATCCTGGTGGGCATCTTTGTCACCTCTGAGTCTCCTCAGCTGTGACAGTGTGCCTCATGGACTCTGCTTGTCCCCACCTTACGACTGAACTAGGGCTCAGCTCGCCAGCAGCATGCTCTGCATGGCTAAAAAAGCCGTCCTGAAAACTGCTGAAGGGCAGTGGGCGAGGGTGACCAGAGGAGGCATTATAGTTAGCTATGTGTCTGTTTCTATGAAATTCTTCCTCTTATGTTTACATTAGACCAACAGCAAGTGAAGAGATTCTAAATCTACCCCCATCCCAAACCATTCCAAGTAGATAATTCTAGGTCCATCCCAAGGCTCAGTGCCTAAAGCATGTTGGCGAGTATTAGAAAATATTCATATGTATATATTTTTAGCAGAGCCTCGTAGGGATAGCAATGCTGATCCTAGCAAAAATGGATAGTTCCTAAAGCAACTTTTCCGTGAGACTGTCTGTGGCTTCTTTCTATCCTCTCCTTGTCCATTCTTCCCAAGTCCTATTCCTTTGAGGCTGGAAACTGCAATTTAAGGTGGTAGCTGATTTAAGGCTTGAGCCCTCCCAAGGATCTGTGCATTTTGGAAGGAAATTTGTAAAAATCATGAAGGTGCCCTAACTCCCTTCCTCATGATTCCTGCTCAGAAGCACTGTGTCGGATCCCAGGGCTCCAGGGAAGTCTTTTTTCCTAATTTCCAAACCTATAACCTGTTGGGCCTTTGCCAGCATGGTACCTGGAGGCTATTCTTACAAATCTAATTCTTTAATACTTTTTACACAGTGTTTCTTTCTAAATACGCAAATACAGAATCACTTTTCTAAAACAACTTTATCCTCAAGATAGAGACATTTGCCTAACTGGTAAATCACACGTTACTTAGGTATATATATTAATTGTAACTAGGTGGAGCTTCCATTTAAGCTGGGTATATGATGGGCTTTGTTAAAATGTGCCTTAAATGCCTACTACTTCAAGAGCAAATGATTCTTTGAGGGAAAGGCAAAGTTAATGCTATGGCATCAGACCCAAGTTCATGGTAGTAAGTGCACTCTTTGATTAATGACACTGATATATAGACTACTGCCTCAAAGCCATCAGCATGGCGATGACCTCTTAGTTAAAGAAAATGTAGGAGTTATGTCTAAGCATTCAGTTTCTGAACTCTGTGCTATTGGAATCACAAAATCTCTTCAATTCCTTTTTCACTTGTTTTTGATACGGGACTTAGCTTTCTTGTGTGTGATCACTTTCACGTCTCAAATCCACAGCTATAAATACATATAAGTATACAAAATAATGTGTAAATATGAAGCTCAAATACATGGCTACGGTGACTGCTCTGGAATATTTCTGCTCATTTTCAAAGGTTGAGAACTTGACCTAGAGGTTTTCAGGGCAATTAGAAATTACATGTGGGGGTGAGACTCTGAATTATCATCTTTATTTAGTTTCAGTAATATAGATTAGCATATATAGCCAGAGTGGCATATTTCTTTTTTTTTTTTTCAGAGTGGCGTATTTCTGATGGTTTAGACATTAAAAACTGGTTGACATTCACAGACAGTACTATTTTGTGAATATAATATATTTTGGACCCTTAAATATAAATAAAAACACAGCAATATTGTTATGTACGGGTTATATGCGAACTCTGTTTGAAATATATTCAAGAAAAACAGCTGAATTGTCTTGATTATTAAAGTATGGTATAC EMBV3_33890 ACGCCGTGATGCTGGAGCGGATGCTGAGAGAACGAATGTTCAGCGCAGAGTATGCAAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26123 AGCCACTGTCCCTCCCCTGAGGCAGACTGGATCCATAGGGAACTGACCTTAATTTTTATC Gene GeneID:521822|FADS2:NM_001083444:100_cdna Constitutive 0 NULL GeneID:521822 29 GENE FADS2 MGC142759 fatty acid desaturase 2 EMBV3_09755 ATCACCACTGGATTTCGGTTATACAAGCCCCGACTGGCCTCCCAGCATATCTACCAGATC Gene GeneID:522311|ITK:NM_001105388:11_cdna UTR3_Alt 2 NULL GeneID:522311 7 GENE ITK MGC165932 IL2-inducible T-cell kinase EMBV3_04707 TCATACCTAATGAGAGCTCCGCATCTAATGTGCAGCTATACCTATGGGTTATGACAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03125 GCTGGAAGAGAAGCTGACTAAGATAACGCGCACTGGCCCTTCTGCTTGGGAAACCAAGAA Gene GeneID:505807|PCMTD2:NM_001024479:889_cdna UTR3_Alt 2 NULL GeneID:505807 13 GENE PCMTD2 C20orf36 MGC139967 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 EMBV3_37374 CATGGAGAACCAAACCCATAATACATTGGGTTTTCCAAACTAACTAACAGCTTTGAAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18235 GCGATCGGTGTCAGGAACAAGGTGGCTGGAGGAAAAATGAAGAAACGGAAAGGCCGTTAA Gene GeneID:534721|DDX47:NM_001046385:104_cdna Constitutive 1 NULL GeneID:534721 5 GENE DDX47 MGC137784 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 EMBV3_26785 AGTCCATGTTGCTGGCCATGATGGGCTTTGACCGCTTTGTGGCTATGTGTAAACCACTTC Gene GeneID:785712|LOC785712:XM_002707785:34_cdna Constitutive 0 NULL GeneID:785712 23 GENE LOC785712 NULL similar to olfactory receptor, family 12, subfamily D, member 2 EMBV3_01286 GGCCAAAACCCAGCAAGATATGCAGTCCAGGCTTCCAGGTCCCTCTAGGGTGCCAGCTGC Variant GeneID:528870|NAV3:XM_002687173:120_cdna 672^740 1 EMBV3_32940 GeneID:528870 5 GENE NAV3 NULL neuron navigator 3 EMBV3_08602 CAGTGGCCTGCATCCAGTGCTTTACCACCTCTGCCAGTTTGCGCTTCTGGGTTACTTGCT Gene GeneID:532497|KCNK7:XM_002699345:222_cdna Constitutive 0 NULL GeneID:532497 29 GENE KCNK7 NULL potassium channel, subfamily K, member 7 EMBV3_40870 TCTGGCCCATCAACACGCTGAAATGCATGCCTATAACCTGCCCTCCACCACCCATACCCA Variant GeneID:281006|APOH:NM_173992:4_cdna 281^454 1 EMBV3_40730 GeneID:281006 19 GENE APOH MGC140489 apolipoprotein H (beta-2-glycoprotein I) EMBV3_32001 CCAGACTATGACCCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAACAGTGAAGCAGG Gene GeneID:614785|LOC614785:XR_083699:21_cdna Constitutive 0 NULL GeneID:614785 6 PSEUDO LOC614785 NULL similar to Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (hNRP) EMBV3_10329 TCACCCTCTGGGGAGCACAACGCCCCCATAAGCTATAAAGTAGAAAAGCAGGTTCTCAGC Gene GeneID:539991|GJC3:NM_001083493:275_cdna Constitutive 0 NULL GeneID:539991 25 GENE GJC3 MGC151709 gap junction protein, gamma 3, 30.2kDa EMBV3_19006 CTCACAAGTCCATTGTTTCTTTTAAAGCGGAACAGGACACTGCTCCCTGGAATTGGGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21119 TGGGGTTCCCAAGACCCACCTGGAGCTAAAGAAATTAATCATGGAGGTATCCAGTGGCCC Gene GeneID:280989|AIF1:NM_173985:30_cdna Constitutive 0 NULL GeneID:280989 23 GENE AIF1 AIF allograft inflammatory factor 1 EMBV3_38385 GGAGTTGCCCAAGGGGACGAGTGGTATGTTCCTAAATAACCATGCTGCAAAACTACAGGG Gene GeneID:512950|FGD3:NM_001024527:96_cdna Constitutive 0 NULL GeneID:512950 8 GENE FGD3 NULL FYVE, RhoGEF and PH domain containing 3 EMBV3_38629 ATGATATTACTATGCAAAGCTTGCCAAAAGAGATGGGCTTCATGGGATTGTGAGCTGTAC Variant GeneID:514473|ATRX:XM_002699982:65_cdna 371^485 4 EMBV3_08510 GeneID:514473 X GENE ATRX NULL alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) EMBV3_26032 CTCTCACACCCGTCATCTCCTGGACTCTCTCTACTCAGCAGTAAATCAGGCAGTGCTAAC Gene BVT0102_208907 + 0 NULL GK000003.2:113867109-113907719 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174805 TCONS_00174808 TCONS_00174809 TCONS_00171428 TCONS_00174806 TCONS_00174807 2 XLOC_104695 XLOC_103815 Coding TCONS_00174808 XLOC_104695 NonCoding NonCoding - 3:113890392-113904482 - TSS129641 9571 3 TCONS_00174808_18 163 0.724166753735242 2 0.320817659166726 4.05418033217715e-06 3.82842058937416e-06 4.07381788395388e-06 2.77064217489108e-06 3.3113672469844e-06 2.31631436473231e-06 1.33889431777264e-06 7.82907712169449e-07 4.32854526304648e-06 0.000385695328491354 0.000600767713920137 0.000313896476882695 3.23206213723245e-05 0.000209766509252022 6.07937627564688e-05 0 0.0113340368779713 0.0025332036870131 3.52971319958744e-06 4.25965630306342e-06 1.259006717023e-06 0 0 0.0138848037875158 6.26110344615442e-06 2.11472796314486e-06 7.26685119629387e-23 0.00309409564854523 0.0022628129854096 0.00795472889353184 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 700 90.69 0.0510918399331313 0 noncoding 1 1 1 1 0.188693051140402 0.27616552616357 -0.0184887763453619 0.737986351096345 GATTTTCATGTTAGCACTGCCTGATTTACTGCTGAGTAAAGAGAGTCCAGGAGATGACGGGTGTGAGAGGCAAGCTTTCTAAGCAAGAGGTGGTTCCTAGCAGAACTCAAACAGACTCACCCAGGACTAGTCACACACAACTGAACAGGCACGCAAGGGTCTGTCCTAACCTAGCCCCGCGGGCTCAGGAAGCATGCTGGGACTCAGGAAAAGAAAAGAAGCCCGAGAAACGGCATGGAAGGGGCTGTTGCAAGCACAGCGCTGGTCCCAGGAACCCAGCCAAATCCCAAATTCATTGCAACATCCCAGGGAGAAGAGTGCCAGCAGGGTTTCCCACTCACAGTGATCAGAGTCAGGAAGGAGAGCGTCCTGGTGTGTGTCCATCAAGGTGGCACGGAGACCCTGATGGTCCCAAGGGGAGCAGAGTGAGTGAGAGTCCACCCTCCAGGGCAGGCAGGACCCCCACAGGTTCAAGGTAATTCAAGGGTCAACCTTTCTGAAGCAAGAACAGTGCTTCCAGAGGAGGGAAGACTGAAGAAAGTGTGTGGAGGTGGACGCAGAAAGATGCCCTGCAAGCCTCAGGCTCCTCAGCCCAGTCCCCATCCTTCGGAGGACCACTCTGGGCCCTTCCGAGCAGAGGTCTGCTCTGGTCTCTGAGTTGCTGGACAGGAGGCTTGGCCTCCTGTTCTTATTCCCAGCAGGCCCAAAGGGTCATACAAGGAGACAGGAGATGAAAGAAAGAAACTAACACCACTTTGTAAAATGTCACCAGAGAGATAGCCTTGCAAACTAAGAAGGGAGTGTGGAGAAGACTGTTTCTATTCATAAGAATGATGTGTGTGTATGTATGTGCATGTGTATGAACAAGACAACAGGAAGAAGAATGTAGAGTGTCTGCCAGTCACAGCAGAGGAGACGGGTGAGCCACCCTGGAGGGTCAGGCCTGCTCTGGGTAGTGCCGTGGGACGCTGTGTGTCCTGGGGCATCACTGAGTGTCAAGGTGGAAAGCCAACCTTTTCTCGGGGTCTCCTGAAGACCCAACCCCTGAGTTTAGGGCGTGTATCCACAGTGGACTGCAGTCCTGCTGCTACTGCTGCTGCTAACTCACTTCAGTCGTGTCCGACTCTGTGCCACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGACTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAACGCAGGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTAGCGATGAAAGGTTGTTGTTGAGTCACTCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATTGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGAGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATACAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCTCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTATACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCGTTCCATAACTGCTTCCAAGCTGATAAGGGGCGCTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCGGAATTATTGTAATTAAGATAGTTGTCCACCGTGGGGAATTAGTTAACGTTTTCCAAAGTGAAGCAATTGAGGCTTCAGGAGTGTCCATAGCCCTAATCATCTTGTTCGTGTGGTTAGTAAAATGAGTGACATTCGTGCTCATATCAGGTATATATGTACAGCACTGGGTATGAATAATGGCACAAGTTCCTCCTTGTGCAGCTGTCAGAATATCTAGAGCCAATCTGTTTTGTAAAACCACCTTTCTAATTTGTGCTTGTTCAGCATTAAGAGCTGAAATAGCCTTTTGAGAATCTTGTAATGCCTGTTGAGTAAAAGTAGTCAAAGCATCCACTCATAACATAACATCTGTAGTTCCCAAAGAGGGAACAAACGCTGCAGCCAAATAATCATACCAATAAAATACAGAGCTTGCCCACCAAGTTCTAAGGTGGGGTAAATTAGCAGGCTTTTCTGGAAGCTCTGAAAATATAAAGCCATGAGTAAAGGCTAGACCCAGGGTGCATCTCCCTATCCAACCAGGGGGGAGCCATGCCCATAGGTAAGAGCCACATATCTAGTAAGTCCCGTTTGGAGCAAGCCAGCGCGACTGAGATATCCAGTCCCAATTCGTGCCTGGCCAGACAAAGGGAGAACCGGAACTGGGATTGGAAAACACAGGAATGATTACATTGCATGTTTCCTGAGACAAATATCCCATTTGTTTCCAATCATTGTAATTAAGTTGTTGGCTAACTTTTGGGGACGGCTCTGTTTGTTCCCAGCATATAGAGGCAGTAGATATTAAATGTCCTTTTTCAGGAGTTAGCCATGTAACCTCATCCCATATTTGATAAATGTCAGGTAAAAAACCATTAGATCTAGACCTATTTTCCTTATATGTAGCAAAATAGTCATTGAACCGAGACAATGTATAATCAAAATTAAAAGTCACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCACGTGATTGTTGTCAAAGGTATTCACAGACTTGGAGAAAGTCTTTATCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAGCTCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAAGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCAAACTGCAGACTCAGGATTTTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGAGCCACAAGCTCCGCTAACAGAGCACTGGTTCCCTAGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGAAGTCACCACGGTGTAACCTGCTTTACGCTTTCCATCCTGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAAGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAAGAAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTATGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGACAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCAGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCAAGCAAGTTCCCCATAACCCGGAATCCAAATTCGACAGTAACCTGTGATTTCCAAAAATCCTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTCTCTCAGGGCCTATGGCCCCAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCTCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGTGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAGTCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCTCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCCTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTCATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGATGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTTGTCCAGATAGACCCATTAGGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCGAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAAAGTTCGACCCGGGAGACCTACACCTCTGGGGGCATTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCCGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCTGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGACTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTGCCTAAGTCCCTCAAGAATACATCTAACAAAATGACTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTACAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTTGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAATTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAAAGTAACACCTTTAAAAGCTCTAATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTATTTCTCCTGGTGGGTGTTTCATAAAGAGACAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCAGGTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACGCTTAGGACATAAGTCTGGCATATTTCGCAGACAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGTAGAACAGTATTATGCTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAGAAAAAAGCGACCAGCGCCATTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTTGGACTTAGTCTGTCCCTTACCGACGCAGGCGCCGTACTCGTCCCTCCCGGTTCTACCACCGAGACGGGGTGGGGATGTACCAGGGGTAGACCTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGTCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACCGCTGTAGGAAACATTCGTCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGACCACAATAAGACCGACGCGAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCTGGCATTACCAAAGGAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTCCGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATCCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATATATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATAAGCCCTATGAGATCACTGTGGAACCGCAGAGCAGAGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACGGTAGAGTTAGTAAAGCACAGCAGAAAACGTGTTCACCAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGGATCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGATGAGCCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACTTGCCTAGGAAATGACTCTCTCAGCGACCCTGTGGACTGCAGCCTACCAGGCTCCTCCTTCCGTGGGATTTTCCAGGCAAGAGTACTGCAGTGGGGTGCCATTGCCTTCTCCGGGACTACAGTCCATAGCGTGGCAAATATTGGACACAACTGAGCGTCTAAGCACAGCATGATACAGCATCCCTGGGGAGAAGGGGGCAGATCCTGGGATGGAAGCTGAGATGTCCCTAAAATTAAATGGAGGACACCTGGCATTTTGAGTAGAGAGGAGGTGAAAAGGTCTCTGTATGTGGAGGTGGCAATGTCATGATAGAAGGAAGATGATTAGAAAGGTTGACCCTTGAATTACCTGCAGCTCATGATAAAGACGGGTTGGATCTATAAGATTTTAAAGGCCCTGCCAAGTGTTTGAGGCCTGAAAAAGACATTTACTAAGTCCAGAATCTAAAAAGTACAAAATCAAATTAATAAAAAGCTATACAAATATAACCTCAGGTCAGTTGGTCCACTGTGTTTCAGCTCATCAAGCGACATTGACAGAATATGTGATGCGGGATATGGGGGGCAATTTAATCCATTTGCTAGGCTGTGGGGTGGGGACCCCTGAAGTCAGAGTGCTGTGGGCCCAGGTCTTGGCACAGGTCCCAAAGGGTCAAGTCTGAATCACCCATGGATAGGCCGGCCTGATGTCTCTGGTGGTCACATATCTTACCATAGGGAGCTTGTCTGTGACTTCCGGGGTGGGGGGTGCTAGGAGTGTGTGAGGCATCAATGTGGGTGGTGGCCCCAGGAGCCAGCAGTAATGAGGAGGGGGAGGGGGCACAGGTCACTCAGCAGCCATGACAGAGGACCACTCCGAAGAGACAGGAAACTGGACTTCCACTTCCTGCATCTGCTAGAGTAAGGAGACCTCAAAGACATGGGTGAAGGGGGAAGAACGTGCCTGGGTTTCAGCGTGAGATGCCTCATGATATTTGGGTTTGGGCTGCGGGGCTTGGCACAATCTCTCCCCACCTCTTCCTAAGGTCACTCATCCGGCAAGATCCCCCAGAGTCAGTTCTCTTTGTA TCONS_00171429 TCONS_00171430 r 5' 7846 TCONS_00171429 TCONS_00171430 r 5' 3238 EMBV3_10402 GCATTACCAGGCAGGGCGCGTCAGCTCGACAAATTTGGCTTCAACAATAAATCTCCTTGC Gene BVT0102_330962 - 0 NULL GK000020.2:17038573-17581126 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25095 TTCCTGTCCCCACTTGCCCCAACCCCAGCCTACCCAGTCTCTTGGACCTATTTTCTATGT Gene GeneID:618106|CNIH2:XM_002699393:400_cdna Constitutive 0 NULL GeneID:618106 29 GENE CNIH2 NULL cornichon homolog 2 (Drosophila) EMBV3_19157 TTGATGATTCAGAAAGACCACCCTCAGTGACTCTCTGTAACCCCAAGGACTGCAGCACAC Gene BVT0102_320020 + 1 EMBV3_18808 GK000019.2:7614075-7830733 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094970 TCONS_00094972 TCONS_00094971 1 XLOC_057614 NonCoding TCONS_00094971 XLOC_057614 NonCoding NonCoding - 19:7802327-7811831 - TSS70945 2631 2 TCONS_00094971_1 69 0.426453819840365 3 0.723455750815532 8.93665463457435e-06 0.000103051587216432 7.68332035095276e-08 7.09311981899593e-09 3.47592683280395e-09 2.43075377161709e-05 1.43872286538583e-09 8.81955613664771e-06 0.000128082494703182 0 0 0 0 0.000116796654469011 0 0 0 0 0.00052072341445752 0.000142500383153398 5.46650870676894e-08 0 0 0 0.000128495428651059 2.81157647748804e-05 5.69814979120537e-05 0 0 0 NM_001102539.1 ZFP30 Bos taurus zinc finger protein 30 homolog (mouse) (ZFP30), mRNA. 2e-97 361 92.40 0.0931204865070315 0 noncoding 1 0 1 1 -1.12173519270986 0.0249854033387361 0.00335304852254957 0.943244660749174 GTGTCCGACTTTGTGCGACCCCATAAATGGCAGCCCGCCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCGAGTAACACTGGGGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAATTCGCTCGTGTCCAGCTCTTCAAGACCCCATGGACTGCAGCCTACCAGGCTACTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGATGGAAGGACTGGAGAGAAGCAAAGGTGCCTGGTGGGCGATGGTCCATATGGTCACGAAGTCAGACAACAGCTGAAGTGACAGCACGCGTGCATTCCTTTGGAAGAAATAGCTGTGACATAGGCCCTTTCAACCACATGGAGTCTTTCCCGCAACCCAGCCCTCTCTGGACACCTTGAGCTCACCCTGCTGCCGCATGCCGCTTCCTGCACTGTCACCCTCCCTTCCTGTGAGTCAGAGCTCTTCATCTTCACCAGGTTCTGGGGGGCCGGCTGCCCCCGGGACGTGTCAGGGTAGAGAGTGAGGACTGGACCATCCCTGCAGGGGGCCGTGCGGATCGCTGGGCTTTGGGGAAGTGGAGCGTTTCCGGGGGCAAACCAGGAAGGCAGTGGAAGGCTGTAGCGTGTCAGGCCTACAGCGTCACCACATCCATAACATTGCCGCTGGGATTATGTTTCCTACGGATAACTAGTAAAGGGGCTTAGGGCTTTGTGCTCAGTGGCTCAAGGCCGTATTGGGATGACACTTAATGAACAAGCATGGGGACAGGATCAAGAGGAAGAAAGAAGAATCTGCATAAATTGTGAGGAAGGAGCCTGGATTCATGGAGGTTGTGAAACTGGGGATTTGTACTATGGGTAATGCTTGTCTATCTTTCCACTGAACTGTAAGTTCCTTGGGGGTGTGAGGTGTGGATTATTCATCTCCAGATGCCCAGGGCCCAACTTAATACCTCGTGTATAGCACACAGGGCTCAGTGAATACTTATTGGGCGTATGGGTGGATGGATGGAGGAATGAATGGAGGGATGAAAGGAAGGAAGGATGGATAAGTGGATGGATGGATGGAAGGGTGGATAAATGGATGGATGCATGGAAGGATGGATAAATGGATGGATGCATGGAAGGATGGATGCATGGAAGGATGGATAAATGGATAGATGGATAAATGGATGGATGCATGGAAGGATGGATAAATGGAAGGATGGATAAATGGATGGATGGATAAATGGATAGATGCATGGAAGGATGGATAAATGGATGGATGGATGGTTAGTTTTTCTAAGGAGGCAGCCTGCAGTCATCTGCCTTAGGTGCCCTTTCTTATCCTGCCCTGCTCCCTTCCTCAGCCGGCTGCCTTGGACTCATCCTTCATAACACAGCATCTGGGGCTGAGGGAGCAGTATAAGCAAAGGCCTGGAAGTAAGAGGGGGCAAGGCCAGTTGGGAAACCGTAGGAAGGTGTGTGTGCTTGGAAAGCACATTTCAAAGGAGAGAGCAGGGGTGGGTGACGCAACTGGAGACTTAATCAGGGGTAAGATTCTCGAGAGTCCCTTGGATTGCAAGGAGATCAAACCAGTTAACCCTAAAGGAAATCAACCTTGAATAGTCATTGGAAGGACTGAAGCTGAAGTTCCAATACTTTGGCCACCTGATGCCAAGAGCCAACTCATTGGAAAATACCCTGATGCTAGGAAAGATTGAGGGCAGGAGGAGAGATGGTTGGATAGCATCACTGACTCAATGTACATGAGTTTGAACAAACTCTGGGAGGCTGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCCTTGGGGTTACAGAGAGTCACTGAGGGTGGTCTTTCTGAATCATCAATTCTGCTTGCAGCACAGCAGGTAAAAGTCACTTTGTACTTCGTGTATTTCTGAGCAACCGAACGACAACAGACTATAAAAGGACTCCATCTCTGGCCCTTTGCTTGAGAGCAGTGGGACCTGTTGAAGTGTTCTGTGCAACATCATGGACAATCGCATTCCACTTTTTTTGTCTACCCCACTTTTCAAACAATGCTTAGAACTTCTGTGCCAGGAACACCCTGGAGCAGAGCTGTGACCCAGGCTGTCAGCTGTTTCACCGGGAAGCACACCAGGCCTGGACTCAGATGGCCTGAATTTCTTTTGAGGCTCACTCTTGCGGTTGCCAGCTGAGTGACACAGTCCCTTTCCCTTGTGCCTCAGTCTCCTCACCTGTGAAATGAATAAAATAGAATGTGCCCAGGGCTGGCTTCATGGACGTGTAGCTTGTGCAGTAACACAGGATTCCATCCTTGCAAGGATCCTGGCCTTGGCTTAATGCTGTGCTGCCACCATATTGACATTCTTATTAATTTTTAAACAAAGAGGCCCATATTTTCATTTTGCACTGGGGCTCACAAATTATGCAGTTGGTCCTGAATCTACCTCACAGGGATGGTGTGAGAATAAAATAAGATCCAGTATGTGAAAAGTCTTTCCTGGGTTTTCTGGCTCTGTGGCTCAGCTTGCGGGATTTTAGTTCCCCAACCAGGGAAGTCCTATGAAAGGTCTTAAAAGGCAATAAAGCCCTCAGCAAATCTTAGGCCTTACTGAT TCONS_00094977 s 3' 26159 TCONS_00094977 s 3' 18903 EMBV3_20178 ACTGTCAGTTGTGCCATGTGGGATCTAATTCCCTGACCAAGGATAGAATCAGGGGCCTCT Gene BVV0102_144686 + 0 NULL GK000007.2:14246201-14276811 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09735 ATGGCTATTGTGGAGGTCAAGATGCTTTCTGGATTCAGTCCTGTGGAGGGCACCAATCAG Gene GeneID:516769|A2ML1:XM_002687816:108_cdna Constitutive 0 NULL GeneID:516769 5 GENE A2ML1 NULL alpha-2-macroglobulin-like 1 EMBV3_34306 TCCTCAAGACCTGTTTCCTCTGGGAGTTTGGCTTCTCTCAGCCGTTGCCTAGTATGGAAG Gene GeneID:528977|LOC528977:XM_002694702:317_cdna Constitutive 0 NULL GeneID:528977 17 GENE LOC528977 NULL similar to DKFZP434H0735 protein EMBV3_13321 AAGCAATGTGTACCCCAGTGTGTGTGGCTATAATCTACAGTTCAGCTAAGCAGTACACCC Gene GeneID:282146|ATP2B4:XM_002693900:236_cdna UTR3_Alt 2 NULL GeneID:282146 16 GENE ATP2B4 PMCA4 ATPase, Ca++ transporting, plasma membrane 4 EMBV3_24855 CTTTGATGCCTTCCAGCTGTATCCCAACACATCCCAGAGTGCCACCCTCTTCTTGCGAAA Gene GeneID:523490|SPEG:NM_001142485:95_cdna Constitutive 0 NULL GeneID:523490 2 GENE SPEG NULL SPEG complex locus EMBV3_11790 GAGGACAGAGCTTAAGTGGACAGAGCTTGCATAGATTGGGTTCTGTTTGGGCTGTCACAC Gene GeneID:538901|KTI12:NM_001080737:100_cdna Constitutive 0 NULL GeneID:538901 3 GENE KTI12 NULL KTI12 homolog, chromatin associated (S. cerevisiae) EMBV3_12096 CCTGTGTCTGCAGCACCTCCTGGGGGGCTTGGTCACAACCACCACCTTCACCATGATGAT Gene GeneID:508702|MFSD3:NM_001101905:44_cdna Constitutive 0 NULL GeneID:508702 14 GENE MFSD3 MGC140173 major facilitator superfamily domain containing 3 EMBV3_25394 GGGTGAACACGTAAGAGAAAATACATCCCTAAACCTTCCCAGCCAGAGTGAGACCTGGAG Gene BVT0102_249881 + 1 EMBV3_43349 GK000005.2:110363543-110365979 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17489 ACTTGTTCAAGTACAAAGGCATTTGAAAGCTTCTAGAACCAATCCTGATGAAATCAGGCC Gene BVT0102_125916 + 0 NULL GK000009.2:20335162-21763436 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234880 TCONS_00234873 TCONS_00234878 TCONS_00234876 1 XLOC_144114 NonCoding TCONS_00234873 XLOC_144114 NonCoding NonCoding - 9:20459891-20775804 - TSS176224 1061 4 TCONS_00234873_6 62 0.535344015080113 5 0.996657296968776 0.000379067572617758 3.58497226436155e-05 9.45937681169895e-05 0.000166960274421329 4.27129039248903e-79 0.000112136794432175 4.58207595766188e-05 0.000233186810000998 0.000304515203819499 0 0 4.28648901804681e-16 0 3.51770736418995e-05 4.22830517915793e-10 0 0 0 1.51003512365485e-05 0.000223412891643433 0 0 0 0 7.80284467650408e-05 8.09457655000953e-05 5.31982356803557e-25 0 0 0 0 noncoding TTCCAGGCGCTGTAACCAACAAACTGCTTTGGGCATGGAGGAGCATGAATAAGTGATGCTGTCTGTTCAAGTTGTGGATGCCGTGAAAGCAGCTGGAGCAGGCCTAGTACCAGCATCGGGCACCTCCCTGAGTCTGAGGGCAACGAGGCGGCCATCGGTCCACCGGAAATGTACAAACAGCTTCTTCCAGATGCTGGCCTTGGTCTCAATGCGATGCTCTTTCGCTTAGCGGATAAACCACCTCATCAGGTGGGACCATTTGGAAGTGACAGTGAAAATACACAAAGCCTGATGCCTTTCAAGTTATTTCATCCTGCACCTTTGCAAGGTCCCTCAACTTGTCAGTAAACTGGATGAGTGCACCTTCTGCGTATTCCTTCAAGCAACGTAAATACTGAACAGAAAGGGAGCAATGGGATGTTTCCTCTGGGAACCCCAACTCTGGATATTCCAAGTCACAAGAAGAGGTCACATGTAGGTGCTCTGATTAACAGGAAGAGAAGAAAACTTGGAAGTTTTTACAGGATGTAATCAAGATTTATGATGAGTTTTTCTGGTGAAGACATTTTAGTGAAACTTGTTCAAGTACAAAGGCATTTGAAAGCTTCTAGAACCAATTCTGATGAAATCAGGCCTTCAATAATATTGCAGATTCTGAAATTCAGTGTAAAATGGGGTTTTCAGTAATTTCTACCCAGCTTGTTTTTAACACTTTTCTAACCTATTTATGTGTCTGGTGATTCATCAGTTAATTAAATAAGCATTAATAAAAAAGTTTGTTTTCCATAATCTGTGAATGAATATAGATGGACAAAAAGCTGCTTATATATTGCCTATTGAACGTGTAAAGACAATCCATATTCATGACATCACTGATAATCACAATATTGTTACTATTTATTACTATGACAGCTCAATATGTAGGTATAAATTTTTTCCTACTCTGTCAAAAATACATGAATTAAAAAGTCCTTTGCTACTTTAATTTTTACTTTAATTTAAATTTTTAAAAATTTAATTAAAAAAACCCTTTCTATTATAATTTTTAATTTTGCTTTTAT TCONS_00234870 s 3' 70364 TCONS_00234870 s 3' 70364 EMBV3_00994 CGACATCTAGTCCCATCACTTCCTGGCCAAAAGATGGGGAAACAGTGGAAGCAATGACAG Gene BVT0101_024957 - 1 EMBV3_32853 GK000002.2:9030991-9502290 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104438 1 XLOC_062379 Coding TCONS_00104438 XLOC_062379 Coding Coding - 2:9401898-9434885 - TSS77329 1736 2 TCONS_00104438_6 140 0.796658986175115 3 0.947462559873886 4.70243337712116e-05 0 0.000106612978610923 4.78349623767793e-05 0.000452196125680487 0 0.000122613971786409 5.79206299566171e-05 0 0 0 0 0 0 0 0 0 0 0.000479163420984373 2.07126411317409e-05 0.000352798694249517 0 0 0 0 2.43506113148046e-05 4.05010736958579e-05 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 964 79.02 0.625576036866359 1 coding 0 0 0 0 -0.357560973555153 0.162439721722154 0.00675994989792807 0.89554859729176 GCAGATGCAGAACATGTGAAGCTGAGGAATGCGGAGAGAGCCTGGCATTGGGAACAATCAGAACTGTTTAGAACTGTTGTAGAGTAGAATGTTTTCTGGTGTGGAATGTGGGGCATGGCAGGAGTCAGATAGGCAGGCTGGTAGAAAGCTTCTATATGTCTCTAGCTATGTTGGGTTTTTACTGATAAAGGAGTTATCAAGTTCCAGGACCAAATCCTGCTGAAAGTAACTGCAGATACAAACCGAAGCTGGCAAATTCCCAGAGGCATGTGGGATCTTAGCTCCCCGACCAGGATGAAACCTGAACCCCTTGCACTGGAAGGTGAAGTCTTGACCACTGGACCATCAAAGAAGACAACAAATGGCATATGAACAGGTGGTGCAGTGATAAAGAATGCACTTGCCAATGCAGGAGACTCGGGAAACAAGGGAAAATGCAAGGAAATTCCAGAGAAATATCTACTCCTGCATCATTGACTATGCTAAAGCCTTTGTGTGTGACTGTGTGTGTCACAATAAACTGTGGAAAATTCTTAAAAAGATGGGAATATTAGACAACCTTACCTGCCCCCTGAGAAACCTGCATGCAGATCAAGAAGCAACAGAACCAGACATGGAACAACAGACTGGTTCCAAATGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTCTATGCAAAGTACATCATGCAAAATGCTGGGCAGGATGAATCGCAAGCTGGAATCAAGATTGCCCGGAGAAATACCACAACCCCAGATATGCAGATACAACTCTAATGGCAGAAAGTGAAGAACAATTAATGAGCCTCTTGATAAAGATGAAAGAGGAGAGTGAAAAAGCTGGCTTAAAACTCACCATTCAAAGACTAAAGATCACGACATCTAGTCCCATCACTTCCTGGCCAAAAGATGGGGAAACAGTGGAAGCAATGACAGACTTTATATTCTTGAGCTCCAAAATCACTGCAGACATTGACTGCAACCATGAAATTAAAAGAGACTTGCTCCTTGGAAGAGAAGCTATGAAAAACCTAGACAGGATATTGAAAAGCATAGACATTACTTTGCCAACAAAGGTCAGTATAGTCAAAGCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAACTGGACCATAAAGAAGGGTGGGTGCCAAAGAATTGATGCTTTGAACTGTGGTGTTAGAGAAGACTCTTGAGAGTCCAGTGGACTGCAAGGAGATGAAAACAGTCAATCCTAAATGAAATCAACCCTGAATATTCATTGGAGAAACTGATGATAAAGCTGAAGCTCCAATATTTTGGCTACCTGATGCAAAGGACTGATTCACTGGAAGACTGATGTTGGGAAGGAGTAAGAGCAAGAGGAAGAGGGACTGACAGAGGATGAGATGGTTGGATGACAGCACCAATTCAATGAACATGATTATGAGCAAATCTGGGAGATAGTGAAGAACAAGAAGCTGCAGTCCATGGGGTTGCAAAGAGTCAGACACAACTTAGAGACTAAACAACAACAACATGAGACATGGGTTCGATCCCTGGGTCAGGAAGATCCCATGGAGGAAATGATAACCCATCCCAATATTCCTCCCTGGAGAATTTCATGGACAAAGGGTCCTGGCAAAAATTTGGACATGACTGAGCACATGTGTGTGAACATTTCTGAATCTATACCTAAATCTATAACTACATCAACATAAACAAACAATACTTCAAAAAAAATTACAGC TCONS_00101623 r 5' 99033 TCONS_00101623 r 5' 67406 EMBV3_09461 CCATATGGTCACACATAGAAGCTACAACTGAAAAGCCTTGCCTTACTAATTTCAAGATCT Gene BVV0102_000738 + 0 NULL GK000011.2:34808516-35028763 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31131 CGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGATATACTGCGGGGACACCATA Gene GeneID:538693|LOC538693:XM_002693452:28_cdna Constitutive 0 NULL GeneID:538693 15 GENE LOC538693 NULL hypothetical LOC538693 EMBV3_29436 CTGTGTGCACGGAGTCAAAGAATGAATTTCTAATCCCTCCCCCTTCCCAACCGGCCAACA Gene GeneID:100297910|LOC100297910:XM_002693524:13_cdna Constitutive 0 NULL GeneID:100297910 15 GENE LOC100297910 NULL similar to four jointed box 1 EMBV3_41455 GCATGTGGATTCTTTATTGATGAGCCACTGGGGAAGCCCCTTTTAAATTTCTACACATGG Gene GeneID:100295767|LOC100295767:XM_002697601:77_cdna Constitutive 0 NULL GeneID:100295767 23 GENE LOC100295767 NULL hypothetical protein LOC100295767 EMBV3_37190 CTGTGCTCTACTTTTCCTCTTTATGCAGAATCATTATTTAGAGGTTGGTTGATTACAGTC Gene GeneID:100336710|LOC100336710:XM_002687751:111_cdna Constitutive 0 NULL GeneID:100336710 5 GENE LOC100336710 NULL N-acylneuraminate cytidylyltransferase-like EMBV3_38464 TGCTTTTGATGAGTCTTCCTCCTCAGATCCCATGATCTTAACCCTCTCCCTAAGTGTTCC Gene GeneID:516599|LOC516599:XM_002693205:396_cdna Constitutive 0 NULL GeneID:516599 15 GENE LOC516599 NULL similar to tripartite motif protein 5 alpha EMBV3_07644 CATGTAATAAAAGGGAAATTGAGGGCAGAGCCATCAGACTGGAGTTGCAAGGACCCAGGG Gene GeneID:781533|LOC781533:XR_083782:345_cdna Constitutive 0 NULL GeneID:781533 10 PSEUDO LOC781533 NULL similar to nucleolin-related protein NRP EMBV3_29695 ACAGATCTACATGCCAGGCATCCCAAGTGACTCATGGATGGACTTCCTGATTGAATCTGC Gene BVV0102_111620 + 0 NULL GK000002.2:114596110-114886132 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30707 TCCTCCCCCAAAAAAGCAGTTGGCACTGTACCCAGAGCCCATCGACCACCTAGAAGATAA Gene GeneID:539236|LY6G5B:XM_002697368:369_cdna Constitutive 0 NULL GeneID:539236 23 GENE LY6G5B NULL lymphocyte antigen 6 complex, locus G5B EMBV3_21520 AAGTCCTGCCAAGCCCAGCCAACTACCATGGCACGTCACCCACACCCACATTTATCATTT Gene GeneID:281728|CSN3:NM_174294:2_cdna Constitutive 0 NULL GeneID:281728 6 GENE CSN3 CSN10 CSNK MGC126997 casein kappa EMBV3_41299 CGAACCTATTTTCATTTGTACAAGCTAATTGTTTTTTAAAGCAAGTCACCTTACGGTGGC Gene GeneID:534612|ARID4B:XM_002698795:169_cdna Constitutive 3 NULL GeneID:534612 28 GENE ARID4B NULL AT rich interactive domain 4B (RBP1-like) EMBV3_07791 CGCGGGCAGGGCGCCAAGGCGGCAGGAGGAAGAAGAGAAAGGATGCACATCACAGGAGGG Variant GeneID:533484|DHX40:NM_001076897:33_cdna 104^163 3 EMBV3_29795 GeneID:533484 19 GENE DHX40 MGC142364 DEAH (Asp-Glu-Ala-His) box polypeptide 40 EMBV3_03047 CATCGTGCCCTTTCTGCTGCTGGACAAGCGGGACGTGGTCAACTGCTTCCGGGACGAGAT Gene GeneID:618444|LOC618444:XM_002691680:91_cdna Constitutive 0 NULL GeneID:618444 11 GENE LOC618444 NULL hypothetical LOC618444 EMBV3_42209 GGACGAAGAGCTGCGGCTCCTCCTGTGCGGAGCCTACCTGGATGTCGACATCACTCTGTC Variant GeneID:359721|RTN3:NM_182657:491_cdna 270^477 1 EMBV3_03148 GeneID:359721 29 GENE RTN3 NULL reticulon 3 EMBV3_37727 TATTCTTTACAGAAGAAAGTGAGTGAAATGGAACTTAAAACAGTAACCTCAGACTTGATA Variant GeneID:521905|CCDC73:XM_002693493:137_cdna 433^648 2 EMBV3_26809 GeneID:521905 15 GENE CCDC73 NULL coiled-coil domain containing 73 EMBV3_11700 TTCCTGCTGGTCATTGGTGTCGGCTTGTGGGTCGGGGCCTCTCTCTTTGCCAGCAACATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34453 CTGCAGACGGGCGCTGACCTCAACCAGCAGTTTATGTAATAAGAATGGGCAAACAGCTGA Variant GeneID:509139|ANKRD37:NM_001075392:25_cdna 297^388 1 EMBV3_34970 GeneID:509139 27 GENE ANKRD37 MGC142530 ankyrin repeat domain 37 EMBV3_11187 ATGAGCCTAAGAGCCAGCGCAAAACTAAACCAGTGCAAGAGCTGTAAAACCAGCTACCTG Gene GeneID:616060|CLEC9A:XM_002687806:79_cdna Constitutive 0 NULL GeneID:616060 5 GENE CLEC9A NULL C-type lectin domain family 9, member A EMBV3_42739 CATTGTCTTCCAGTGTTAAAGGCACTCCCCCCTCCTGCCTTGACCTTCATTCCTAGGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21234 TTGTGAAGGCCTAGCAGGTGTGAGTTTGGTTCCCACTGCAGCCAGCAAGAAGATGATGCT Gene GeneID:786562|LOC786562:XM_002699234:190_cdna Constitutive 0 NULL GeneID:786562 29 GENE LOC786562 NULL similar to zinc finger protein 740 EMBV3_34444 TGGCTTAAAATTTCTGGCCATTGTCTAGAAAAAGCAACCCATTTTTTGAGTGAAAAACAA Gene GeneID:524136|NDST3:NM_001077961:33_cdna Constitutive 0 NULL GeneID:524136 6 GENE NDST3 MGC142329 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 EMBV3_39106 GGCCTAGAATTGAAGTTGAAACTACGTATTTTTACACCCTTATCAGTTGTTTTGGAATCC Gene BVT0102_098425 + 1 EMBV3_40610 GK000001.2:82694777-82705703 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001349 TCONS_00001352 TCONS_00001350 1 XLOC_000328 Coding TCONS_00001350 XLOC_000328 Coding Coding C1H3orf70 1:82573539-82698797 j TSS680 5590 1 TCONS_00001350_3 186 0.0323792486583184 3 0.955395706427585 2.36108584091634e-05 0.00028612037024787 2.86795755216859e-09 8.81997173889378e-05 4.04359289814026e-05 0.000124523236590467 4.00346235469505e-07 5.59765423190508e-05 5.6136552975141e-05 1.87820244876941e-06 1.0505562148895e-06 5.79569486381541e-06 4.85148832956141e-06 1.54049308359888e-05 0.00011002918903972 0.000358931927915752 0.000514842485304997 1.49263285242381e-05 1.52976654832583e-09 2.94008071553105e-05 2.97937823246591e-11 0.00024327906328884 0.00011965207004893 3.30676044674485e-09 4.13711155394708e-10 0.000115892027568117 5.89655584834683e-10 1.07686157174699e-12 1.61072327329754e-05 0.000144147141438602 XM_005201555.1 C1H3orf70 PREDICTED: Bos taurus chromosome 1 open reading frame, human C3orf70 (C1H3orf70), transcript variant X1, mRNA. 0.0 8157 100.00 0.808944543828265 NM_001025266.1 C3orf70 Homo sapiens chromosome 3 open reading frame 70 (C3orf70), mRNA. 0.0 755 75.85 0.195885509838998 TCONS_00001350_3 sp|A7E369|CC070_BOVIN CC070_BOVIN UPF0524 protein C3orf70 homolog; 4e-86 258 100.00 0.645161290322581 0 noncoding 0 0 0 0 -0.662629237581007 0.056514393953777 -0.0697643941348756 0.244750995098845 GTGTGTGTGTGTGTGTGTGTGTGTGTGTACGAGAGCAAAGTGGGCCGCGCGTGGGGCAAGGCTGTGCGTGTGTGAAAACTCCGCTCCCACCTGCGCAGGGACTATAGCGCACTGGGCGTCCGGGTCCTCAACGTGCACAGCCCTCCGCGGAGTGTGAACATGTGTTTCGGAGGGAGTGTGTGTGGGGGAAGCGTGCGTGGAAGCTGGCGTGCGTGTGAAAACCGAGCCTCCGAGGCGGCTGTGTTCCTAACAGCCCTCCGTCCGTGGGGGCCAGCCTACGGAGGTTGAGTGAGTGTGCGGCGGCAGCAGGGCCGCCGAGCGTGTGTGAGCAGCCGTGTGTGAGAAGGCGGGGCTGGCGGGGGGACTCGTGGCGTCTGCCGGAGCCAACGCGCGTGTGTGCGCGTGCGTGTCCACGTGGGGGCGCGGCGCGCGCCACGGCGGAGGGAGGGAAGGCGGCGGCAGGCCCAGCCCCCGGTCGCAGCGCCCGGGGCGGCTCCTCTGCGAGCCTAGGGACCGCTGCGCTCCCGCCGCCGCCAGCTCTGCTACCGCCACCTCCAAGGGCTGACCTGACTCCCGGCCCGCGCCGCGCCCGCCTCGGCTTCCTGCCTGCCCAGACGCCGCTCCTACCGAGCTCCCGGTCTCGGCTCCGCGGAGTGAGAGGAAATGAGTGCGGCCGCGGCGCCGGCGCCCGAGCGCGGTTGGAAGAGCGAGAAAGTGGACGAGGCTCAGGCCCTGGCGCGGAGTTGCGCCGCCCGCAGACCCGACTTCCAGCCATGCGACGGGCTCTCCATCTGTGCCACGCACAGCCACGGCAAGTGCTTCAAGCTGCACTGGTGCTGTCATCTCGGATGGTGTCACTGCAAGTACGTGTATCAGCCGATGACCCCTGTGGAACAGCTGCCCAGCACTGAGATTCCTGCGAAGCCTCGGGAGCCTGCGAACACCATTCAGATTTCGGTCTCCCTCACTGAACACTTCCTGAAATTCGCGTCTGTTTTCCAGCCCCCTCTGCCCCCTGACTCGCCAAGTTCCGAGGACTCTGGGATCAACGCGATTGGGGCTCACTATGTGGAATCGTGTGACGAGGACACAGAAGAAGGAGCAGAACTGAGTTCAGAGGAAGATTACAGTCCAGAGAGCAGCTGGGAGCCAGATGAGTGCACCCTTCTTTCCCCCTCGCAGTCTGACCTGGAAGTGATTGAAACAATAGAAACCACCGTGTGAGGCCCGGCGGGAAGCCACTGCTCTGCTCCATGCTGAGCTTTTGTACTTCTGTCCGATGGACCCTTTTTCCAGTGCAGTCAGTGTTTTCTACCCCTCTGTAACAACCGTAGCAGTTCAGTGGTCTGCTGATTAGCTTCACTTTTAAATTTGTCTTATAACTAAGACATTCTTTTGTTATAAATGGTTTTCTTTTGTATCTTCACTTCCTTTCTATGTAGCATCTGGTGTCATGAATTGTGACCCAGCCTTAATTTCACTGGGAACTTTGAAAGCGATGAAGCGATGATCACAGAGCGTCATGGATCAGGTTGAGGAGATCCCAGAGTGAAGGAGACACTGTTCTGTAAATAGCCAGTTCTTCGCGGAACAGCTCTCTGGCAGTCCTTCTGGCGGCTGATGAGCACCGCTGCCCTGCTAGTCCTGGTGGGAAACTGGTTCACGTGACCAGTCCAGGGTGTGCTCTGGTGCATGCCATTCTGGCCTTTCCTCATCTCTCTGCTATCTGCACTGGCTCTGGGCCAGTGTTGCCACAGCTTCCTGGAGGCCAGCTCAGCCCCCAGTTAAAGCAGTGTCTGCACAACCAGCCCTTCATGACCTGGGGCTGGGCTAGACCTCGCTCCAGAAGAGATGACATCATCTGTCTCATGCTCAGTCCAGCTTAGGTTGAATGCCTATCCCCCCTCCAGGGTGCTATGTGGATACGGAAATGAATAAGGCCTGACTCCCAGCAGGAAGGGACCGTAGTCTACTAGGGGAGGTAATCCATGCAGGTGAGGGGACCTAGAGTGCCCTGGGAAGCCGGGGGAGGCAGAGATGCACTTGGCTTGGGCTGGCTGGAGAAGGAGTAGCATTTGAGCTGGCCTCAGGGGTGGCTTCCCCAACATTTCCCTGCTTTTTCAGTTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCTGCTTTTTAAAATTGTTCAAATCTGCGGGAGACTTTTAGGAAGTTATATAGGTATTATATTTAGGAGGCAGCCACATCTCATGTCTTAAGGGAAAAAAATCAATAATAGTTTTAGTTAGCATGGAAATGCTAAAGACAGCAGTCCTTTAGGGATTAGGAATGAATCTAATAGGTTTGATTAACTCTGCTTCATTTGGTTGTATGAAGCATTAGAATGGCTTAGGTGAGAAATGGATTAGAATTCAGTATGATGCATGGATTTTTTATGCCGATGCAAAAACAGTTGAAATAGTTCACTGCTAAGTCAGGAGAAAATATTTTGTGTAATATTCATTCCCTTTACTACAGTAATATTCATGGGCTATTGTAAATGTTCTCTTTTCCTACACACATAAAATAGTGACTGATTCTTTCTTATTTAGCTCTCTTCAGAATTTTGCTCCTAATCTCCATTTATAACAGGTGTTCTTGTGTAACTTCTCCAAATGTACTGTCTGTGAGGCACAGTTAAGAATCCAGGAAATTTGAAATAGGCCGCATGAAACTAAACTATCCAAGCTGGGGACAGACAGTCACTTCCTGTACCCTGACTCTCCATGAGTGTGCTCTCGTGGCGTCATCTTGTGCCCTGTCAGCATCACGACGCGACTCTTCTGTGTCTCGTTAGTTCGTATTTTAAGAAACAAGAAGGGGCCTGTGTGTCCTTTCCTGAAGCCTCCACTTGGCATCCTGCACAGATCTCTCCAGGCGGAACCTGCTTTCCTAGTTATATGTGCAGTCCATGTGACTGGCTAGAACATTTCGTTAGGTTCAGGTGCCCTAAACATCCTGAAGGGTTTAGAAAGCAGAGTGTGCGTATTCCTTTGGAAGCAGTGTTACTTAACACTTTGTGTGCTAACAGGTGAGAATGCAGCCAGCATCAAGTTCCCACTTACTGAAACATAAAGAGTCAACACATCAACCCGAGAAGATGGTGTCCAGAGCTCCAGGGCCAGCGGGGCCCAGGAGAGGGCGACAGAGGTGGGTGTGGGGAGAAAGGCTTAGGGACAAAGGGCTGATGAGCCCTGCTCTGGGCTCTTAGCACCACTGGGACTGACTGGCCGCCTGCAATCAGGGTCCTGTCTGCAACTAGCCGTGGGTGAGCTCATTTCATCCCTGGACAGGAATATGAGGCTCTGTTTGCACTGTTCCTATTAGTTCTCTCCTCCATCTGTTCATGTGGTGATAGTTGGGGTCAACCACCAGGTCTCTAAAGCCATGGAAATCCATGGGCTCAGGGCCACGCTTCAGGCTGGCTGTGCCAGGGTTGGGCCGTTCATATTTATATCTATGACTTTTGCCTAGGTTCCTGTTTTTTAAAACTCCTGAACTGCCATTCAGATTAGCCAGGATTTTAATGGAATTTTTAGATTTAACACTAGTTGATAATCACTTTAAATACTTGCACAAACTCTTTATAATTAAAATCTCACTAAGATTCACTTACTACTATCAATTTTATAGAATTGGAGACATCCCATTGGATTCTAAATATAAAATGCTCCTGGATCTCAAAATAGCCTTTTCTAAATAAGCACAAGCAAGAATTTTTTTTTGTGCTATCACTGTTAATATTAATAATTGTCTGAAATCATATATGATTGAACCAGAATTCTTTATGCTTGGATTCCAAAACAACTGATAAGGGTGTAAAAATACGTAGTTTCAACTTCAATTCTAGGCCTATTCTGTTCTGTATTATATGAAAGAATTTCTCTGTAATCCTGATACTACATTATTCATTTGTATAAGCATATTTATAGGCACTTTAGAAAATGTTTAGACTGCAGTGTGTATTATAGACATTGAACACAGTTATGTTAAATAGGCTTTTGATTAATACTTGTACATTGAGAGATATGAAAGCTTTATCATTTGGACCTTTGCTCACCTGGGCAAAGAGGTGGGCTGTGTGAATGGAAAAACTGCTTTCTCAGGCTTTTGTCAAAAACTGACACCATTCCCACTTTTTGAAAGTTGGTGTAAAAGCTGTTAGGTAGAAGATACGAAATAAGTACTGTGTGGAGTTTAGCTTTCTGATCTAACCAAGATTTCTTTTAGCATTTTCGAGTTTCACATGTGTTCATGACTTTTCTGAGAAATAACAAAGCAATTAAAATGCTTTTAGTGGTTATAACTATTTGGTACATTAACAATGGAAGCTTTACAATAAAAAATCTAGGTATATTCAAGATTTGAAATGCAAATCTGAGAAAAACCTATGTAGAAAAACTGCCGCATTCCTGGAAGGGGACGACCTGTAGTTCAAGGTAATACAGTAAAAATAAAATCAGCAGAACCAGAACAAAACCATGAAGTTGTTTTCCTGAAGTACCTTTTTGGATTTGATCTAGGATTTGATTTTATCTTGAGAGTGGTGGTTTTATTTCTTAATCTCTGTTTCCTGGCCTGTTTGAGCCATCATAGTTCCTCTGATCATAACCTCCTTTTATGCAAATATCTCTACTTAGGCAGTAGGATGCAACCAGGTAATTTAGAAAGCTGTCAAAATACCCAGATACTTTTGGTGGTATAAATACTTTTAGGCAAGGGGGAAAAAAAGCACAATTAGAAAAAAATATTTATACTGTCAACACTTATTATTCCATCTTATTTGCAAAATTTTGTTGACACGTTTTGGATTTTTACATGAGGAAACCAAAGCTTTCTTGGTTTCTTCCCCTACCCCCCACTCCAGAGGAGGTGTCAGTGCAGTGAGAAGGCCAGTTGTTTCCGGCTTTCGTCTCTTCCCCTTGAGGAGGGGAGAGCGAGCAGTGGGCGTTCTGTGCTCTCGGTCAGTGCCGTCAGTCCCAGGGATGTCCGTGTTTCTCACATTCAAACAGGAGTACAAGGGCACTCAGAACTAACTTTGGAATAATTAACCTTTAGAAAATTTGTGTCACTGCTCCCTTTCATTATCACGGGTAATTGAGAATTGGCTGTGCTGGGAAAGGGCCCCGTCTCTGGCGTGCTTTGAGTTCTTTCTGTTCAGATTGAAGTGCCCTCTTCATAGGCTGGACAAGTCTAAAAGCAAATCATCACTAGCGGTTTTAATGCTGAGCTTCCATATCACGGTGTTCATATGTACTTCTAAGGCTGTTCGTACCTTGTAATGTTCACTTACTGTGTGATTTTTAAAACCTGTCTATTTTCAAGTTTTAAGCACAATGTTGATTGTTCTCTAATTTACCTTGTTTTCCTACAAACAGCTCAACTTTCCTCTCTGTATAATACTTTAGGAGAATACTACCTTGTAAAATAAACGTGATTTTTTCCTTTTTTACCAGCACAAATATGCTATTTTGAATTTTGGAATATCCTTCCTCCCCACCCCAC EMBV3_37771 GTTGGGAAAGAAGGCTGTGCTCTTTGAAGAGTACTGGCGGAGGACGCTGGGCATGCAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29961 ACTGGCTAATGAATAAATGGCCCAGAGTTGAAACCAGGGACAAAGCGTTCCTCCTCCCAC Gene BVT0102_282357 + 0 NULL GK000011.2:28914008-28985137 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024530 1 XLOC_014528 Coding TCONS_00024530 XLOC_014528 Coding Coding SOCS5 11:28983452-29054298 j TSS17980 4808 1 TCONS_00024530_6 536 0.0210066555740433 4 0.932189992236573 2.85767460523078e-05 5.70285972291089e-05 0.000189716039957929 9.16368185376635e-05 5.97657349065302e-05 2.01264744731909e-41 6.97807438742748e-82 9.09458306396678e-05 0.000251221271372385 0.000297251012595698 8.12328705465244e-43 6.02299455626266e-56 4.4292688319004e-06 0.000331123100752366 1.29860242869987e-24 4.01075064281089e-121 2.97438423639983e-38 5.49503571204896e-15 0.000137394232549822 0.000120045428883857 3.97629348303891e-47 4.43697876560998e-25 0.000241783964509154 2.60034282044196e-68 0.000209857814816387 1.49395043322155e-05 6.96734612174956e-05 1.2147949556646e-37 2.82211708438975e-51 1.87691908209897e-35 XM_005212611.1 SOCS5 PREDICTED: Bos taurus suppressor of cytokine signaling 5 (SOCS5), 0.0 8121 98.91 0.957778702163062 NM_014011.4 SOCS5 Homo sapiens suppressor of cytokine signaling 5 (SOCS5), transcript 0.0 5689 89.06 0.905990016638935 TCONS_00024530_6 sp|Q29RN6|SOCS5_BOVIN SOCS5_BOVIN Suppressor of cytokine signaling 5; 0.0 1121 99.81 0.998134328358209 3 coding 0 0 0 0 0.0471476576648217 0.673591605138496 -0.0160223455712816 0.786428494466831 AGGAAGTAAAATCGCTCCAGATGAAACAATCAGGGCCATCTTTTCTTTGAGAACAAGAAGGAAGGATGAGAGGATACTAAGCAGGGAACTTTGTCAGTTTTGTTCACCACTATATCCTAAGCACCTCAAACAGTGCCTGGCACATTGTAAAATGCTTAGTAAATACTGGCTAATGAATAAATGGCCCAGAGTTGAAACCAGGGACAAAGCGTTCCTCCTCCCACCACTTCAAGGCTGACCTTCCGCCCTCAAGCCCACCACTGCCCCTTCTCGGACCACGTGACCCTGCTCAGATCCAGAGACTCGCCGCCGCCGACTCCTCCCCTTGGGCCCGCTTTACTCCGCCCCTCAAGCCCACGTGACCTCATATCTCCCATCTGACTGGCTCCTCCCTTTCCCCCGGGCCGGACCCGGCCGCCGTCGCAGCGGCCCGACTCCAAAATGGCAGCCGCGCACAGAGCGTACCCGAGCGGCCGGACCTCCCTGACTCCCGGGCCGTCCAACTCTCGCTCCCAGCCTCCCTCCTTCGGCCTTCACCTACACACCTTCGGATTGGCCGCTAGGAATCCCGCCCCTCCAGAGCCCCGTCTGCTATTGGTCACGGTAGGCTGCCCTTCAGAGAGGCGTGCCGCCACCGCCCCCCGCCCCGGGAGGTCTTATAATCAATGGATAAAGTGGGGAAAATGTGGAATAACTTCAAGTACAGGTGTCAGAATCTCTTTGGTCACGAGGGAGGAAGCCGTAGTGAAAATGTGGATATGAACTCCAACAGATGTTTGTCTGTCAAAGAGAAAAACATCAGTTTAGGAGACTCAGCTCCTCAGCAGCAAAGCAGTCCCTTAAGAGAAAACGTTGCCTTACAACTAGGGTTAAGCCCTTCAAAGAATTCTTCAAGGAGAAACCAAAACTGTGCCGCTGAAATTCCTCAGATTGTTGAAATAAGCATTGAAAAGGATAATGACTCATGTGTCACCCCAGGAACAAGACTTGCAAGAAGAGATTCCTACTCTCGACATGCTCCTTGGGGTGGGAAGAAGAAACATTCCTGTTCTACAAAGACACAGAGTTCACTGGATACGGATAAAAAGTTTGGTAGAACTCGAAGTGGACTTCAAAGGAGAGAGCGGCGGTACGGCGTCAGCTCCGTGCACGACATGGACAGTGTGTCCAGCAGGACTGTAGGAAGTCGCTCTCTGAGACAGAGGTTGCAGGATACTGTGGGCTTGTGTTTTCCCATGAGAACTTACAGCAAGCAGTCAAAACCCCTATTTTCTAATAAAAGAAAAATACATCTTTCTGAATTAATGCTTGAGAAATGCCCTTTTCCTGCTGGCTCAGATTTGGCCCAAAAATGGCATTTGATTAAGCAGCACACAGCCCCTGTGAGCCCACATTCAACATTTTTTGATACATTTGATCCATCCTTGGTTTCTACAGAAGATGAAGAAGATCGGCTTCGAGAGAGAAGGCGGCTTAGTATTGAAGAAGGGGTAGACCCCCCGCCCAACGCACAAATACATACATTCGAAGCCACTGCACAGGTTAACCCGTTATATAAACTGGGACCAAAGTTAGCTCCTGGAATGACTGAAGTAAATGGGGACAGTTGTGCAGTTCCACAAGCTAATTGTGACTCAGAAGAGGACACAACCACGCTGTGTTTGCAGTCACGGAGGCAGAAGCAACGTCAGGTGTCTGGAGACAGCCATGCCCACGTTAGCAGACAGGGAGCCTGGAAAGTCCACACGCAGATTGATTACATACACTGCCTCGTGCCGGACTTGCTCCAGATCACAGGTAATCCCTGTTACTGGGGAGTGATGGACCGCTACGAAGCAGAAGCCCTTCTGGAAGGGAAACCTGAAGGTACATTTTTGCTCAGGGACTCTGCACAAGAGGACTACCTCTTCTCTGTGAGCTTCCGTCGCTACAACAGGTCCCTGCATGCCCGAATTGAACAGTGGAATCACAACTTTAGTTTCGATGCCCATGACCCATGTGTGTTTCACTCCTCCACTGTAACAGGACTTTTGGAACACTACAAAGACCCCAGCTCTTGCATGTTTTTTGAACCATTGCTTACAATATCACTAAACAGGACTTTCCCTTTTAGCCTGCAGTACATCTGCCGTGCAGTCATCTGCAGATGCACGACGTATGATGGAATTGATGGGCTCCCTTTACCATCAATGTTACAGGATTTTTTAAAAGAGTATCATTATAAACAGAAAGTTAGAGTTCGCTGGCTAGAACGAGAACCAGTCAAAGCAAAGTAAACCCTCCTGTCCCAAAGGGCATTAACTAGATCTGCTTTTTTGTGCATCAGGCAGTGTTCCTATAGCAAGCACACATATCAGTGTTAGGTTTCTTCAGTACAGTATGCAAGCTTAGTGTTAGTATCTGTCAGGTGCGATCTGCTGTTACTTTTACTCAGTAAATGTGGTGCCTATTGAGACAACAGGGGATAGAGCTACAGGTATTCAGTAAGGCTGCAGAAACATTCTGCCGATTTAGCTGACAGTTTGGTTTTTAATGGCTGTAGTAACTGAGTGAAGCAACTCTGGGGCATTTGCTATGAAGAATTCTATTTCTTACTGAAGAACAAATTATTAATATTGAATGAGTATTTCAACAGTATGACTAATGTTTGAAATTATTATTTTTTCTAAGAATTTTTCTATAACCTTCCAAAAGTAGTGATGTTTATAGTTACTGTAAGTCAAGTTTGGAAGTCCAAAAACATAAAGACTGCCTTCCTTTTAGAAAAAAAACACAAATGCAATTTCTGGCCACAAGGGCATAGTGCAGTTCACGTAAGTGTGGATATAGTTTATAGTCAGCCTCCTTTTCTCTTCTGCAAAAGGTACTGTTAAGTAAACCAGGTTTTCTAAGTAGTAGTTCTTAAAATTTCAGACTTAGAAAAAGTTGGTAGTAGAATTTTATTTAAGGCCTTAGGTATTCATTTTTTAATGAGTGCTTTAACTTAAAGCGCATTGGAAATAGCTGCTGCAAGGTAGGCCTGCGTGTGATTTTTTTTAAGTTGACACGTGCAGTCGAGTTGCTGGTTTGTTAAAGTTGGATCTTTTTCTATGCCCATGATGAGTTTGTGAACCATGAAGAAAGTGAGACGAGAAGATACCCAGACAAGTCAGAGGATACTAACTCCAGTGGTTGCTGGTCGTTGAAATTATTGTTAAACTGTAACTCATAATTTGGATGGCAGTATTTATCTCTTTGTTGTAAACTCTCATAGCTGAATTGCTTAAGTACAAGTTACAGAATTTCAGTGCACTTAATTTTTAATGGAAAATCTGAAACCTAAATTGCTGATTTAAAAGGTACTGTACAACCATTGTATCTGTAAATAACTTTACTTAGCACCTTTTTGTCACTTAGAATAGTATGCAATACTACTTGAGTGAGCTATTTTGGACGTAATACCAAGTTCTAGTGTTTGCTTCTTAGTATTGAACCGAATTTACAGTCCGTCTTAGACATTTTGCACTAAAGTAGTCAAATCTGTTCTTGTGTCTTTCTGTTAATGTGCTCTGTACCACTGGTGAGTGCTCCCTAGTTTCCTTACCTGCTGCTACAGAAAGTTATTTTACATCCCAGTGGCTGTCGCCAAGGCCACAAAAAAGAAAAGCTATATTTGTATGCAACACTAACCCTTTGACTGCTAATGTATGTTTCTGCTTGCTGTGCCTTGTTATGGCTGCTTTTTTGTGCTAATAAAGTATGTTTGGTGTTCTCCTTGTATATCTGCTGTTTTATACATTTGCAACAATTTCTCTTGTAAATGGAATGGTTTGGGGTTTTTAAATAAGCATTACCTGGCAACCTCCTATAGTTAATGCAGAATTACTGAACAGTCTAATATTGACTTATTCCAAGTAAGCTAATTCTAAATTTAATTCTGTACATCTTTCCAATCATAATCACATATACTGTGGAACAGTATCTCTCTAGTTACTGAAAATTACTGTATAGTTTAGGTTATAACAGAAAATGAACAGAGAAGTACTGAGTAAACCTATTGATTTCTCTGCTTTTAAGTGAAAGATTGAAACTATCAGTGACATGTTATAGTAAATGAATATCTGTAGCCTCCTGCATCAGAAGCAAGTTAAATGAAGTCTTGTGAATTAATAACAGTAGCACCATTTATTGGTTTGGGGACCATTTTAATTAATAATAAATGCCCAAAATGTAGAAACTTTAACCAAAGACTTGTCCATTTTAAAGCAAAATGGGGATTGAAGGGACTTACAATTCCTGTCATTTCTAGTAGAAGTCCCTGAAGAACAAATACCAAAGTGTTTGAGAACGTCATCCAAACCTACTTTAAAGCATTATGTGCAATTAAGTTGTTATGACATAATGACATTGCATAATTGTTGGGTCCGTTTTCTTGAACTTATAATGTACCTGAAAAATAAACCTCTTGGGGAAATAAAGAGTTCATACTGATTATTGGAGAAAGACTATATATGCAAGCAAGATCTTGTTTTAAAGAGGTAACTTGAAACTCCAAGAAAGCACTTGATGTTTTATATGCTTGTAGGAAATTCATGTTTTAATTGTAGTTTTACAGAAAGTATTAATGCTTTTATGTATTTCAGAACTTTCTTATGTTAAATGGAAATTGTTTTAAATGTGTAAATATTTGAGTTTATGTAAGCATGTATACACTGTGCTAAAAGTCACTTATGTTTCAGTTTGTGTGTAATATTCATATGCGACTTTTGGTTTAAATTTTTTTCTTAAAAAAATTAGTGGCTTACATTTTAAAAAAAGAAAAATCACCA EMBV3_06614 CCTTGCCTCGCACCAGGTCTTACCCTTCCAGTATGTTCCTTCTGATGAGACAATTTCCAG Gene GeneID:326285|FGF10:XM_002696350:46_cdna Constitutive 0 NULL GeneID:326285 20 GENE FGF10 NULL fibroblast growth factor 10 EMBV3_38532 GGCAGGCCCGTCTGCTCATGATTAATCACACTGTTCGGGCTGGCCAGTTTTTCATGCATG Gene GeneID:617095|CALM1:XM_002691114:40_cdna Constitutive 2 NULL GeneID:617095 10 GENE CALM1 NULL calmodulin 1 (phosphorylase kinase, delta) EMBV3_36319 CCTCACCTTCCACTTGCTCTACTGTGGGCCTCGTCACATCGCCTACTTCTTCTGTGATAT Gene GeneID:512551|LOC512551:XM_002707797:179_cdna Constitutive 0 NULL GeneID:512551 29 GENE LOC512551 NULL similar to olfactory receptor 982 EMBV3_38073 GAAAGCCATCGACTTTGACCATTTCGTCTACTGTGAAGACCAGCCCGACTGCCTCAGCAA Gene GeneID:617637|TSLP:XM_002691071:13_cdna Constitutive 0 NULL GeneID:617637 10 GENE TSLP NULL thymic stromal lymphopoietin EMBV3_37072 TACCCATGCTGCAGACTGTGGCCAAGAACAAGAAGATGACAGAGGAAGAAGTAGAGATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36512 ATGAGCAGAGTGAGCATAACGTGTGCCAAGATATAAATGAATGTGATGCCAGCAATCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05843 ATTCCCGAATCCTGACCTTCTTAGACGCCTACCTTGCCTCAAGTCATCAGAAGCCATCGC Gene GeneID:508910|TCP11L1:XM_002693497:149_cdna Constitutive 0 NULL GeneID:508910 15 GENE TCP11L1 MGC127983 t-complex 11 (mouse)-like 1 EMBV3_28935 CAGGAACCCTGGGAACTTGCACTACTCACAAAGACGTGGTACACGAAACTAGCGAACATC Gene GeneID:616618|LOC616618:XM_002688406:82_cdna Constitutive 0 NULL GeneID:616618 6 GENE LOC616618 NULL similar to Chromosome 4 open reading frame 36 EMBV3_43180 TTAAGGTTGACCTCTTACATGACCAAGGAATGGCGGCTCCGAGAGGAACGGTGTCCAGGT Gene GeneID:613424|ARMC7:NM_001083504:26_cdna Constitutive 0 NULL GeneID:613424 19 GENE ARMC7 MGC143184 armadillo repeat containing 7 EMBV3_01078 CCCAACTCAAATGTGAGATAGGAATTTGGTGCTAGCAATAAGCTACTCTGGTAATGCATG Gene BVT0102_023584 + 0 NULL GK000020.2:10384172-10390981 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114494 TCONS_00114496 TCONS_00114495 TCONS_00114497 1 XLOC_069301 Coding TCONS_00114497 XLOC_069301 Coding Coding MRPS36 20:10388729-10399228 = TSS85393 2768 1 TCONS_00114497_1 103 0.244219653179191 4 0.736711754619928 0.00110404125845845 0.0015688638772562 0.000674095201956437 0.000861957811792128 0.00107118389125851 0.000315511187221038 0.000754295760005078 0.000432832752358719 0.00133563973001766 0.000114009126826218 3.49818069162437e-05 9.53734301526636e-08 7.01067224611325e-05 0.00137484735121685 8.3418746485211e-07 0.00188704852758787 0.00198592998276377 0.0103507498785819 0.00156232767495238 0.00171357360608386 0.000919842750573805 0.00156248359649401 0.000452779414637762 0.00258418742078534 0.00103051051867624 0.00050117226707055 0.0010428504315243 0.000789419570791975 0.000240381819101135 4.45402768798579e-08 NM_001035438.1 MRPS36 Bos taurus mitochondrial ribosomal protein S36 (MRPS36), mRNA. 0.0 787 99.32 0.160043352601156 NM_033281.5 MRPS36 Homo sapiens mitochondrial ribosomal protein S36 (MRPS36), mRNA. 0.0 1296 81.65 0.492052023121387 TCONS_00114497_1 sp|P82908|RT36_BOVIN RT36_BOVIN 28S ribosomal protein S36, mitochondrial; 4e-71 211 100.00 0.990291262135922 0 noncoding 1 0 1 0 -0.262176220456774 0.549048385667785 0.0328916346217403 0.557956399831909 CACAGGCAGGGCCCGCCCCCAGTCGCGCCGGACGCCTGTTAAAACCGCGGCTCGCCAGCGCCCCGGAAGCTGCCCCTTCTCGGGGGTCATGATGGGCAGCAAGATGGCGTCTGCCAGCAGGGTCGTTCAGGTAGTCAAGCCACATACTCCATTAATAAGGTTCCCTGATAGAAGAGACAATCCTAAACCAAATGTATCAGAAGTTCTACGATCAGCAGGACTACCATCTCATACTTCTTCAATTTCACAGCATTCTAAGGGAAGTAAATCGCCAGACTGGCTGATGCATCAGGGTCCACCAGACACGGCAGAGATGATAAAAACTTTACCTCAGAAATACAGAAGGAAACTTGTGTCTCAAGAAGAAATTGAATTTATCCAACGTGGAGGTCCAGAATAATCACTGATAATGTGGCTCTAATATTTGTCATCAGATAAAGAAGAGTCTTTCTAAAAAAGGACTTCCAGAATGACAAATGAAAAATTGTATATTAAACAACTTTAATAAATATTCTGTAAAAAGGAAAAAAAAGATGAAGTATAGAAAATTTAGATGGACACTTATGTCTCCTAATTTATGTATCTTGGTCAGCTTCTCTATAAGCTTACCTGATTGTTTATATACTTTATACCTTAATTAAAGTATACATTTTAAAATGTTAGCCTATTAATTTACTCTTGATTATCAAGCATAACAGTGTTGAACTATTGAAAGCACTCAATGTCTAGTGAACCGTCAAAGGCTTCCAGTAATTTCACTTTTCTTTCAGTTTCCATTTAAACATAGAAAATATTTGGCAGAATTGCAGCTTTCTAGAAGTAATTTTCCTGAACTTGAATGAGGATTCGTGAAATAATAACTCCATTATTTGTTCTTACTTCTCAGTGTTTTTGCATTCACAAAGTTACTGGAGTATAACTCGCTTATTAACAAGCATATCCTACTTTAAATGATAAAAATATACCCATGGTAAAACAGGTGACTTTGTGATATTAAGACTAGGGAGTTAACACATAATATTATATGTAACCTGTATTCAGAAAAGAAATGCCAGAGTATAAAATGGAAAATGAGATAAAAATAAATATAGCATACGAGTAACATTTGACCAGAAATTGTAATTTATTATGTTTTCAGGGGGGTTAAGAAAGTCTTGTTCTTTGGTTTATCTCTTTCTTTTGATTGTGATCATGTATACAAATCCTGATAATCATAAACTTTCTCAAACTTAATTGTCTGAAAGTCTCATAAAATCAACCTATTTACCTTAAGTCAATTAACAGAATTTTGATAGGGTCTTCCTGTGCCAAGGGTATGTATAATTGTGAAAATAAAGCCTCACAAAGTGAAATAAATTCTCTTCCATACCTTTAATGATTTGTAGAATATACTTTAAAGAAATCATCCCTAATAGTAAGGGTAATTCATGAGTAATAGAGTAGAATTGTTGTGTTTGCCCAGTTACATATGGATTAATCTTTATACTTATTTTGTTTTTTTCTACTGTTTCAGAGTTGATCTGCTCTTTGTGTAAATTCTGTATTGTGGCCTATTATAAATGTTACCCAACTCAAATGTGAGATAGGAATTTGGTGCTAGCAATAAGCTACTCTGGTAATGCATGAGAAATAAATGACTCAGGATTTCTTTTTTATTATTTAAAAAATGTATTTGGAAAAATTTCTTAAAAACCAGTACTATTCTCTTTTTTCTCCTTAGCTTTCTTATTTCAGTAAAAAGAAGCTCATGGCAAGTTTTTTCTTCTTTCAGAAACAGTAGGTTCAGGAGATGAAGAGTGGCTTAAGTAATACTGTGGGCTGGCAGTTAGAAACCCCAGCACTGGAACTGAGGGCCACCTTTACTACAGCTGCTGCCATGAAAGTTCCAATGAAAAAATATATCACTTTTATATAATTTATGACTAGAGGCATGACAAAAGGATATTAGTGGGAACTGCTGTCATAGGATGAGCTCCCAAGGAGGATAGTGTCATAGAAAGAATTTGGGTTTAGCTTTAATAGCTTGTATACTCATGTAGGAGTTAAACACTTAAGTATCTGTAACCATTAGTGAATTGCTTAGTTTGTCCAACTTGCAGTTTTTTCTCCAGTACTATACAGTTTGATAGGCAGGATCAAATTAGTGTATTGACTGTTGCTGTTGCTGTTCAGTCCCTTAGTTATGTCCGACTCTGTGACCTCATGAAATACAGCATGCCAGGCCCCTCTGTCCTCCACCATCTCCTGGAGTTTGCTCAAGTTCATGTCCACTGAGTTGGTGATGCTAACACCTTCTGCTACCCCTTTCTCCTTTTGCCTTCAATCTTTCCCAGCATCACAGTCTTTTCCAATGAGTTGGTTCTTCACATGAAGTGGCCAAAGTATTGGAGCTTCAGCTTCAGCAGCAGTCCTTCCAATGGATATTCAGGGTTGATTTTCTTTTGGACTGACTTGTTTGATCTCCTTGCTGTCCAAGGAACACTCAGGTCTTCTTAGTGCAGTTGCTCAGTCGTGTCTGACTCTTTGCGACCCCGTGAATTGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAAACTCACATCCATCAAGTCAGTGATGCCATCTAGCCATCTCATCTTCTGTTGTCCCCTCCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTCCAGTGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGG EMBV3_20061 GCGGTATTACTCCTGAGAACTTCGCACCTGCTCCGCCGGCTTCATTTTTCATGTTTCTGA Gene GeneID:508493|PNPLA2:NM_001046005:248_cdna Constitutive 1 NULL GeneID:508493 29 GENE PNPLA2 ATGL MGC137478 patatin-like phospholipase domain containing 2 EMBV3_38596 CACTCACACGCTGGACTGGCTCAAGTTCGGCAAGAAGGTGCTGGTGGTGCACTTTGAGGA Gene GeneID:525243|WSCD2:XM_002694610:133_cdna Constitutive 0 NULL GeneID:525243 17 GENE WSCD2 NULL WSC domain containing 2 EMBV3_25928 GAAGACGGTTTCGGAGAGCACCCCTTCTACCACTTCTTGGTGGCAGAGTGGAATGAACCA Variant GeneID:508861|SAT1:NM_001034333:11_cdna 338^556 3 EMBV3_14444 GeneID:508861 X GENE SAT1 MGC127572 SAT spermidine/spermine N1-acetyltransferase 1 EMBV3_35157 AGCAGCTGTCATCTTTTGAAACGGAGTTCAACACACAGCCACATCGCAAGGAATCTCCTG Gene GeneID:617655|C6orf106:NM_001076471:161_cdna Constitutive 0 NULL GeneID:617655 23 GENE C6orf106 NULL hypothetical protein LOC617655 EMBV3_17578 TCATCGACCCCTGTTTAAGGAACGCTGAAGCCAAGGCCGACACGAAATTCTAGCAGGTTC Gene BVT0102_232412 - 0 NULL GK000024.2:42008183-42059245 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142734 1 XLOC_087159 NonCoding TCONS_00142734 XLOC_087159 NonCoding NonCoding - 24:42038328-42039833 - TSS106945 1505 1 TCONS_00142734_3 114 0.324252491694352 1 0 0.000329970993721707 0.000327158398717637 9.22325982447222e-05 5.51771368992104e-06 6.23297992568458e-05 2.85213617054279e-05 0.000348740586020758 0 7.33965591461071e-05 0 0 0 0.000156332918486587 0.000331311216966529 0 0.00105295098035236 1.10314062404792e-05 1.66716892243875e-05 8.10004914179554e-05 0.000296258555627659 0 8.8752162421079e-05 0.00013410571166532 0 1.84145515859534e-05 2.34068060040186e-05 6.2289960837329e-05 0 0 3.99485393069818e-06 XR_239764.1 LOC100848447 PREDICTED: Bos taurus uncharacterized LOC100848447 (LOC100848447), 2e-43 181 87.59 0.0956810631229236 0 noncoding 0 0 0 0 CGGCTGTGCTGGGTCTTCATTGCTATGTGTGTGCTTCCTCTAGTCGCAACAAGTGGAGACTAGTCTTCCCTGAGGTCCACAGGCTTCTCACTGCATTGGCTTCTCTTGTTGCTGTGAAGCACAGGCTCTAGGAATACGGGTGTAGTTCTGGTGCATGGGGTTGCCCCGAGGCATGTGGGATCTTTCCCAACCAGGGACTGAAACTGTGTCCCCTGCATTACCAGGCAGGTTCTTAACCACTGGACTACCAGTGAAGTTGAGAAAGGCCTCTTTGTGAATAACATGACCATCAATAAGATGCTATCTTTCCTCCCTTTTGTGTGTCCATATAGCAACTTCCAACAAGGGTTCAATAGCCAACATGGTCAGTGCCCATCCCTTGGCCCAATCAATGTTGCCAGAGGCAGAGTACTGTAATTGGAAAGATAACATGCCCATCCCAGTGGACAGAGGACACCGTTCTGTTGCCAGAAGGGCAGTAAGAAAGCTTTTCAAAAAGTCAGAATACAATGGCTACCGCAGACCATCTTGGTCTGTTGTGGGCCAGTTGTGGGCCCTTCCTGGGCGTCAAGCCAAGGGGGCGGAACTTTTGAGTGGGAGACGCAGGGTACAGGGGAGGGATCTATTGTCAGACTTGAGGCGGGCTGATTCGGAACAGGGTAGGGTGGATCACAGAGGTCAGTCTAAACATGTAATGAAGTTGTAGGAAGAGGCGCACAGGCAGGAATTGAGGTGATAGGGAAGAGCTATCTATCCCCAATCTTGGGGCTTCCCCGGTGGCTCAGATGGTAAAGAATCTGCCGGCAATGCGGGAGACCGGGGTTGCATCCCCGGGTCGGGAAGATCCCCTGGAGAAAGGAATGACAACCCACTCCAGCATTCTTCCCTGGGAAATTCGATGGACAGGAGACATCCCCCAAGTCAACCGCCAAACTTTATAAGACAAGAACATTTGCAGGACAATTCCTGAAGCCTTTGTGAAGGGTTTCTGGAGGAAATGCAGTTATTTCCGTCTTCCTTCAGATCTAGTTCTGTGCGCACGCCTGCCGTGCGAAGGGCAGCTAACTCAAGAGCTCCTCGGTACAAGGTGCAAGGATCGAGGGAGGCTCTCATCGACCCCTGTTTAAGGAACGCTGAAGCCAAGGCCGACACGAAATTCTAGCAGGTTCCTCTTTAGAAGCCCGGGGCGCTTCCTTTGTCCAAATCCCCAGCAAAAGTCCCCACCCCAAGCCAGACTCCCCACCCAGCCCGGGATGAGCCCCACCCCGCGGCTGCTGGGCCAGCCTCCGGGCCGGTTTAACTGGTTGGGACTGAAACCCGCGGTGAAGATGGTCTGCGCCTCGGGAGCTAGGGAACAAGCTGTGCGGAGCGTGGACAGGACAACTCCTGCCCTTCTCCGGAGTTCGGCCGACACTGCCCGCAGCAGTCCTCCCGGAGCCCGCGCTGGATAAGTTCGCGACCATCCGACCCCCTACCACTGGGAACTGCGCAGGCGCCGGCAGCGC TCONS_00139038 . 5' 290 TCONS_00139038 . 5' 290 EMBV3_30466 GGGCAGTACGTGGTGGATCTGACGTCCTTTGAGCTCTTCAGTCAGCCATTCATCCAGGCC Variant GeneID:521103|C28H1orf57:NM_001075816:84_cdna 388^477 5 EMBV3_11944 GeneID:521103 28 GENE C28H1orf57 C1orf57 MGC140669 chromosome 1 open reading frame 57 ortholog EMBV3_18438 CTCTAGACCCTGTGAGCCGCAATTACTGAGCGCAAGCTCCTCAATTTCTGAAGCCCTTGT Gene BVT0102_106135 + 0 NULL GK000015.2:17798654-17857164 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05783 AAGAAAGAAATCAAGAGAGGAAGGAAGTTGCCTGCTTTTCAGGAGTGAAAAGAAAAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23703 CTCTCTGACATTGCACAGGAAATTGGAAAGGTGATTTGGACTCTTGGGATCTGCTTATTT Variant GeneID:617867|LOC617867:XM_002686907:117_cdna 399^576 1 EMBV3_34684 GeneID:617867 4 GENE LOC617867 NULL hypothetical LOC617867 EMBV3_04325 TCGGATGCTTTTGAGACTCTGTCTTGGATCAGGTGGAGTCAGCTGGGTGAAGTAGCGAGA Gene GeneID:507061|DUSP5:XR_084086:206_cdna Constitutive 0 NULL GeneID:507061 26 PSEUDO DUSP5 NULL similar to dual specificity phosphatase 5 EMBV3_30605 TTAAACTGTAATGAGCTTCAGAGTGTCAGGAGAATTCGTCCCCGGCCACCACGTTTGCCA Gene GeneID:281037|CATHL3:NM_174001:22_cdna Constitutive 0 NULL GeneID:281037 22 GENE CATHL3 CAMP cathelicidin antimicrobial peptide EMBV3_28000 ATGCTCCCGTGGAGATAGAAAAATCTATTGTCTTATATATAAAGAAAACATTTGGGGGAC Gene GeneID:513223|RASEF:NM_001105362:22_cdna Constitutive 2 NULL GeneID:513223 8 GENE RASEF NULL RAS and EF-hand domain containing EMBV3_20023 GGAGATACGCCAGATGAGTATGAGTAAGTTTATGTATTGTCAAAAGACTTGGATATCACC Gene BVT0102_166570 + 0 NULL GK000024.2:21336785-21361883 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138579 TCONS_00138584 TCONS_00138578 TCONS_00138576 TCONS_00138577 TCONS_00138583 1 XLOC_084686 Coding TCONS_00138578 XLOC_084686 Coding Coding SLC39A6 24:21316861-21341862 j TSS103813 7153 1 TCONS_00138578_7 747 0.241856563679575 11 0.71432 0.000175547075590768 0.000212688463728282 2.04220797666657e-08 0.000191286514437358 9.27592557188333e-05 3.39659097300954e-05 8.10768221080542e-05 4.2532631163839e-05 0.000334252427352075 0.00089544039176347 0.000116613530089907 1.69835512246975e-05 2.57795664636478e-32 9.28027135267266e-06 1.99047763666705e-05 0.000104737313848886 5.427544407928e-08 1.53935709103872e-31 1.77322379672127e-08 0.000116020283759259 1.69326573773024e-13 0.000576821428633853 0.000134483953205752 0.00129398346819728 0.000152276721977479 0.000158877710527534 0.00015905511473554 8.08428789612592e-09 0.00011288349609967 2.75493693798571e-17 XM_005223984.1 zinc transporter PREDICTED: Bos taurus solute carrier family 39 (zinc transporter), 0.0 7607 100.00 0.589542849154201 NM_012319.3 zinc transporter Homo sapiens solute carrier family 39 (zinc transporter), member 6 0.0 3826 85.05 0.469313574723892 TCONS_00138578_7 sp|Q13433|S39A6_HUMAN S39A6_HUMAN Zinc transporter ZIP6; 0.0 1217 89.99 0.998661311914324 1 coding 0 0 0 0 -0.459669259304867 0.043827404637965 0.00170167480823899 0.982796197791019 GTGGGGGGTTGGCGAACGAGTTTCTCAGAGAGGCGGGGGGCGCGGAGGAGCTGGAGGAAAGCTCCCCCGGCAGATCTCGGCGCCCGGCGCGCACCAGGACCGCGTCTCCGCCCCACTCCCGCCCCTGCGAGCCCCGCGGCGCCAGCGAACAGGCGGACCCGCGGACCCGCCCGCCGGGGACGGGGTGGAGCCGCACTGCGCATGCCCCGCAGCCGAGGCCGGCGGAGGCGGTGGCTCCTGGCAGCGCGCTGCGCGCGGCGCTAATTAGTGATTGTCCTCCTGCTCCCGGGAGGCGGCGGCGGTGCCGCGTGGGGCGCGGCTAGCCGGGGTCTACGCGGCGCTTCCCCGACCGAGGGGCAGCCGGGCCGATGAGACCGCCGCCTCTCCGTGCCGTGTAGAGATCTCTAGGGAGACAAGTAAGGGTCGGCTCCGCACCGCCGGCGGGAACTTGAACCGGCGCGCGGGAGCGGGCCGGGGGTCGGCGAGGCCGCGGAGAGAACGATAAGCAGCCGCTGTGCAATACTGCTGACAGCGTTTGGAGCACTTCCACATACATCCATGCTAGTGGTTTCCTCTGTCTCCGTACGAAATAGGTGTTACCCGCTGGTCCAAGGAAGAAGCGCTGAAGGAAGGTGCGATGGCGAGGAATTTATCAGTGATCTTGATCCTGACCTTCACTCTGTCAGTCACAAATCCCCTTCATGAAGTAGGACCAGCCACTGCTTTCCCTCAGACCACTGAAAAAATTATTCCAAGTTGGGAATCTGGCATTAATGTTAACTTGGCAGTTACCACACGGCAGCATCATCTACAACAGCTTTTCCACCGCTATGGAGAAAATAATTCCCTGTCAATTGAAGGGTTCAAAAAGTTGCTTCAGAATATAGGCATAGATAAGATTAAGAGAGTTCATATACACCATGACCATGAGCATCACTCTGACCATGAGCATCGCTCTGACCATGAGCATCACTCTGACCATGAGCATCACTCTCACCATAATCATGCTGCTTCCAGTAAAAATAGTCGGAAAGCTCTCTGCCCAGACCATGACTCTGATGGTTCAAGCAAAGAGCCGAGAAACAGCCACGGGAAGGGGTCTCATCGATCAGAACATGCCAGTGGCAGAAGGAATGTTTTAATCAAGGAGGGTGTCGGTGCTAGTGAAGTGACCTCAACTGTGTATAATGCTGTCTCTGAGGGAACTCACTTTCTCGAGACCATAGAAACTCCAAAACATGGGAAACTTCTCCCGAAAGATGTGAACAGTTCCACTCCACCCAGTGTCACAGGAAAGAGCCAGGCGAGCAGACTGGCTAGTAGGAGAACCAATGAATCAATGAGTGAGCCCAGAAAAGACTTTATGTATTCCAGAAGCCCAAGCGAAAATACTCAGGAGTGTTTCAATGCGTCAAAGCTGCTTACATCTCATGGCATGGGCATCCAGGTTCCATTGAATGCCACCGAGTTCAACTATCTCTGCCCAGCCATCATCAATCAGATTGATACTAGATCATGTCTGATTCATACAACAAGTGAAAAGAAAGCTGAAATCCCTCCAAAGACCTATTCTTTACAAATAGCCTGGGTTGGTGGCTTTATAGCCATTTCCGTCATCAGTTTCCTGTCTTTGCTGGGTGTGATCTTAGTGCCTCTCATGAATCGAGTGTTTTTCAAGTTTCTTCTGAGTTTCCTTGTGGCATTGGCTGTCGGGACACTGAGTGGTGATGCTTTCTTACACCTTCTTCCACATTCTCATGCAAGTCATCACCATAGTCACAGCCATGAAGAACCAGCAATGGAAATGAAGAAGGGACCACTTTTCAGCCACCTGTCTTCTCAAAACATTCAAGAAAATACTTATTTTGATTCTACATGGAAAGGGCTGACAGCTCTGGGAGGCTTGTATTTCATGTTTCTTGTTGAACATGTCCTCACGTTGATCAAGCAATTTAAAGATAAGAAGAAAAAGAATCAGAAAAAACCTGAAAATGATGATGATGTGGAGATTAAAAAGCAGCTGTCCAAGTATGAATCTCAACTTTCAACAAATGAGGAGAAAGTAGATGCAGATGATCGACCTGAAGGCTATTTACGAGCTGACTCACAAGAGCCCTCCCACTTTGATTCTCAGCAGCCAGCAATCTTGGAAGAAGAGGAGGTCATGATAGCTCATGCCCATCCGCAGGAAGTTTACAATGAATATGTACCCAGAGGGTGCAAGAATAAATGCCATTCGCATTTCCATGATACACTCGGCCAGTCCGATGATCTCATCCACCACCATCATGACTACCATCATATTCTCCATCACCACCACCACCAGAACCACCACCCCCACAGCCACAGCCAGCGCTACTCTCGGGAGGAGCTGAAAGACGCTGGCATCGCCACATTGGCCTGGATGGTGATCATGGGGGACGGCCTGCACAATTTCAGCGATGGCCTCGCAATTGGTGCTGCTTTTACTGAAGGTTTATCAAGTGGTTTAAGTACTTCTGTTGCCGTGTTTTGTCATGAGTTGCCTCATGAACTAGGTGACTTTGCTGTCTTACTGAAGGCTGGCATGACTGTTAAGCAGGCTGTTCTTTATAATGCCCTGTCAGCCATGCTGGCGTATCTTGGAATGGCCACAGGAATTTTCATTGGTCATTATGCTGAGAATGTTTCTATGTGGATATTTGCACTTACTGCAGGCTTGTTCATGTATGTTGCTCTGGTTGATATGGTACCTGAGATGTTGCACAATGATGCTAGTGACCATGGATGTAGCCGCTGGGGATATTTCTTTTTACAGAATGCTGGGATACTTTTGGGTTTTGGAATTATGTTGCTTATTTCCATATTTGAACATAAAATTGTGTTTCGTATAAATTTCTAATTAGGGTTTAAATGCTAGAATTTAAACTTAAAGCTATAGTTTGCTGTCTGTAGTTTGACTAGGTCATAGGGAGATGAGTTCGTATGATGTGATCCATAGCACTTAAGGTTAGTGGATTTTGTGATTTTTTTGTATTGAATATTGTCATTTGTTATGCCTATAAGGTCAGTTATGGTGGTAACATAAAGGTACGTTTTAATATTTAAGTTATTCTGTTTTGGGAATATAAGCTATATGTGCAATTTACCAATATTACCAGTTTATTGTATAAACAAGAGATTTGGCATGACATGTTCTGTATATTTCAGAAAAAAAATCTTAATTTTTTTTTTTCTAGAACTAATTTAATATAGTGATTCCCATGCTGGATTTTAGGCTTCTGAAGAACTGCTGGTGTTTAGGAGTAAGAATACACATGAAGCTTAAGATACCAATAAAACTTAAACTGAATTTAAGCTAAGAAATAAGGAGAAAAAGAGAAGAATCTGTATGAATTAAGAAGTTATAGATTTCATATAAAAAATCAAAACTGGTTATTAAATAGAAGGGGAAATTTAGATATAAATGAAAAAAGACAGTATTAGTAAAGTACAGAGTACATTCATAAACATTTTTGTCAGAATGTTAATTGTTCCAATAAAACCTCAGCACTTTTTACTAATTTAGTTGTACATTTAACTTTGTATAGTAAAGACATCTAAATATATTTAATAATTTGAAAAATACATCATTTGACCAAGAAATTCGAATTTTAAAATATGTATGGAGATATGCCAGATGAGTATGAGTAAGTTTATGTATTGTCAAAAGACTTGGATATCACCAAGTCATGTTATGTATCACCCAAAGTTACATTATTGGATGTTCTGGTTATCTGGTTTACCACTTGTCAGAGTATTAGAATTTCAATATATGTAAGAACATTAAAACAGTACTGATTATACTTTGACTTCTTGGATTCAGAAGGTAGTTTGGTATCTTTCAGTGCTTCAGTGTTGTCGTTGTGAGCAGTTGTCATTTTTATAGATAGTACTTTAGATGTACTAGGGTTGTATGGCGTTCTCTAGTTGTTGATTTTCTACAAAATAAATTCCCATGTCAGCTTCATATCATATATTCTGATTTTCTTTGCTTTTTTTTTTTTTTTTTTACCATCTTAGCCATTTTTAAGCATATAGCTTGATAATTTTGCATATATTCACAATGTTATGCAATTTGTCTCCAAAACTTTTTCATCTTGCAAAACTGAAACTCTTCGTTTCCTTCCCATAGTAACCACCATTGTACTTTCTATGAATTTGAGATGTTTGATTTTCTTAAATATAACCCAGACTATATATACTTGTCAATTCATTTATATTATTGTATTAGGTGGCTTAATTCAATTTTTTACATTTTTATCACAAAGGGCACTTCAGAAAATACTGGTCCACAGTTTGTTCAAAGCTGTCCCTAACTTAGAAAATCCCCCCCAAACAAAAAACAAACCCCAGAACCTAAGCTTGAGAAGAAGCAATGATACCCTAGATTCTAAGGAGAATCAAGAACAACTGGGCAAGACTCTACAGCCTGTGTACTGAAAGACAATTTTGGACCAGCATTTCTGTTCCCCAGACCAAGCGAGAGGGGTCTGACTAACGAGAATTACTTGGATTGGGGTGGGCAGCAGGAGTGCTTGAAAGGATGAGATGGGACGTCTCCTTCTCAGGCTAAATGATTGCTGTGCTCCAGAAATCCACAGATCCACCCTGATGCCACTGCTGGGTCAGTGCAAGATGAAATTCTGGACATTGGAAACTGTTCCTCCAGGAGTTTGGGAGATGGCTTGTACCTACTTCTTTCATAGAGATTTTGAAGATGGAAGGTGTGCTGGACCAGTTCACAAAACAGGAAGATAGCAACCATAGTTTGCACTCCAATTTGAACTCAATAGTGAGTATATAGAAGATTTAAGGAGTTGGTTCCCACGGCTCTGTGTGGGAGAGATTGAAGATCAGAGGACAATGCAGAAACTATAGAATATGAACCAAAGGCTGTTTGTTTGGGGGAAAACACATAACAGACTGATAGAAAATTAAAAGGTACAAACAAATAATATCTTGAATAAAGAAGGAGACATAAATAGAGATGTAGTAGATCCAAACAATCATTAATTGTTTGGATAATTAACAATCGTTAATTATGAATATTTATGGAAAAAATTGAAAATCAGTAACTTAAAATGACCACCACATCACAGTTGTTCCAGGCCTCCCTCAAAATAACACCCTTTTGCTGTATATTTACCAAAACTTCAAGCAACACATATTATCCAAGTAGATTATGGGATTAGAAAAAAAAATATTCATCATGTTAATTGAGATTAGTGTAACCTGATACAAAACCATTCTGGGAAAAGCAATCTGCCTGGTACCTTAATACTCCCTATATGTTCTTGCAGCTAAGTCAAGAATAAAAGGCCCTGAAAACTCTGCCTGGGCCAATTATCAGTGAACAGCCTTGAAAGATGAGGCGTAAGACAAAGAGCAGATCTTGTACAGGAGAGATGGTTTCCCCAAGCTCGGCGTTCTTCAGTGCCACACACACTCAGTATGTGCACCATCCACCTGCAACCTTTCCCTTTGCTTCTATGAGACCTGAAGCCCAAGAGGGTCTTAAATGCTGCTCATGCTGCTTGCTATGCTGTGAACAGTAAAGTCCATTGTGTCCCAGAAGTTCATGTCTTACGCCCCAATCTACAAGACAAACAGGCTAACTTATAGCTTCTAAATTGGATAAAATTCCAGACCTTTACAAAACCTCATAGTATAGTACAAAAAGGGAAAGCAAAAGCGAATGCATGGTCACTTCAGTCGTGTCTGACTCTTTGCAACATTATGGACCATAGCCCACCAGGCTTCTCTGTTCATAGGAAGAATTTCTTCAGGCAAGAATACTGGAGTGGGTTGCCATGCCTTCCTTCAGGGGATCTCAACCCAGAAATCGAACCCACGTCTCTTACGTCTCCTGTAAGAATCCTAGATGAAACAGCAAATCAAACTCAGAAGTGTATGTTTCGATCAAGTAAGGTGGCCCTGGGAATACAAAGATGCCTAATCAGAATACCCATTACCGTCATAAACCATGTTAACAGAGTGAAGTGGAAAGATACAAATTTAATTAATATAATTCTCATTCAGGATTAAAGAAAAGCATTTCAGCATATTAGAAACAAAATTACTAGAATTTGAGAAGTCTAGAAACTTGTCTCCTTGAATATCCCCATCGTATGAAGTCAAGGGTTTAAGAAAGAGTAGCAGTGGAGGGGAAGGGAGATGTGCAGAGAGGGAGGAAATGATAAAGACCAAAAAGAAACTCCTATTCCAAAGATGGAGTGGAACTTGAAACTCCCAACTTATATGTTTACATACAAAGTATAATGAATAAGGAAGTAGCAAGCTGCCATAATTCTATCAGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTGGGCTGCAGTCCATGGGGTCACTAAGAGTCAGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCGTTGGAGAAGGAAATGGCAACCCATTCCATGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGTTGGGCTGCCATCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGTGCCATCTGGAAAGCCCAACCCTTTAAACAATAATTCCCCTTTCTTCCCTCCTTCAGCTCCTGGCCTACTTTCTGACTCTACTTACTGCTTGACTATTCTAGGTACATCATATAGATGGAATCATACAATACAATATTTGCCCACGTGAGTCTGGCTTATTTTGCTCAGTATAATGTCTTCAAGGTTCATCCATGTTGAAGCATATGTCAAAAATTCTCTCCTTTTTAAGGCTCAATAATATTTCATTATATGTATATAACACATCTTGTTGATCAATTCACTCAGTGAAAACATTTGAGTTGTTTCCAACTTTTGGCTATTTCAGGTACCCTACTGTTAGTATGAACATAAGTGCAAATAGCAGTTTGCCTGCTTTCAGTTCTTTGAGGGGTATATAATATACCCAAAAGTGAAATTGCTAAATCATATTGTAATTCTATGTCTGTTTTTTTAAGAGTTACCATATGGTTTTCCACAGTGACTGCACGATGTCACATTCCCACTAGTACAAGGGTTCCAATTTTTGGAACCTCACCAATATTTGTTTTCTGTT EMBV3_33809 TAATCATTTAAGATGGTCTGTGTTGTTTGTTTGGACTTCCCTGTTCCTCCCCCAAAGAGC Gene GeneID:534692|SSX2IP:NM_001076036:68_cdna Constitutive 0 NULL GeneID:534692 3 GENE SSX2IP MGC143079 synovial sarcoma, X breakpoint 2 interacting protein EMBV3_31961 CTGCTGGCGTGGGAAGGAGCGCTTCAAAAGCCTTCCCTTACATGTTACAAGTCTACACAA Gene BVT0102_032228 - 0 NULL GK000023.2:47959600-48333209 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07608 CTGTCCTTCCAGAGGTCGAGAGTTCCCTGGATAATGACAGCTTCGACATGACTGACAGCC Gene GeneID:525252|ATXN7L3:XM_002696041:325_cdna UTR3_Alt 2 NULL GeneID:525252 19 GENE ATXN7L3 NULL ataxin 7-like 3 EMBV3_15834 GATCCATGACTCTCTGCCTCTATATGCTCCTGCGCTCCTCTATGGGCTTTAAACAGGTGA Gene BVV0102_076629 - 0 NULL GK000030.2:21142209-21770405 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18325 TTATGGCTATGTTGGAGTTTTTATGGACTCTCCGACACTCAGAAGCGACTGAGGGGTCCG Gene GeneID:100337027|LOC100337027:XM_002693084:430_cdna Constitutive 0 NULL GeneID:100337027 15 GENE LOC100337027 NULL glutamate receptor, ionotropic, kainate 4-like EMBV3_22539 TCTGAGAGTTCAAAGCATTCAGCAAGCAGTGGCAAAGCAGATCCATCAAAAGCGGGCACC Gene GeneID:100301462|LOC100301462:XM_002700421:8_cdna Constitutive 0 NULL GeneID:100301462 X GENE LOC100301462 NULL similar to cytochrome c oxidase subunit VIIb EMBV3_42908 TGTCGCGGCCTGGAGCTCATTGCTTCAGAGATACTACGGAGGAGCAGAGGTAGTGGATGA Variant GeneID:507197|SHMT2:NM_001034282:956_cdna 276^355 3 EMBV3_08886 GeneID:507197 5 GENE SHMT2 MGC128707 serine hydroxymethyltransferase 2 (mitochondrial) EMBV3_01963 AGAACCTAGTGGCCGTCACACCGCCCCCTTCCGGCCCTGTTGTTCCTCTTCACATAATAA Gene GeneID:539970|DCAF15:NM_001034685:37_cdna Constitutive 0 NULL GeneID:539970 7 GENE DCAF15 MGC128405 DDB1 and CUL4 associated factor 15 EMBV3_05890 TGACACTCAGCACACACTGATGCCAAGAAACAAGGCCCAGCAGCCCCAAATCAAGCATGA Gene GeneID:280995|AMBN:NM_173988:14_cdna Constitutive 0 NULL GeneID:280995 6 GENE AMBN NULL ameloblastin (enamel matrix protein) EMBV3_01155 TCAGCAGTGACGAATCATGCTGCTCAACTGGCAATGATCAAGCACGTGACCAGGCGGGAA Gene BVT0102_229695 + 1 EMBV3_25743 GK000005.2:114100142-114291723 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00223720 TCONS_00201906 TCONS_00201912 TCONS_00223729 TCONS_00062705 TCONS_00063594 TCONS_00223718 TCONS_00070446 TCONS_00201908 TCONS_00063595 TCONS_00087818 TCONS_00187685 TCONS_00062707 TCONS_00232656 TCONS_00032895 TCONS_00112239 TCONS_00223721 TCONS_00187642 TCONS_00232652 TCONS_00140816 TCONS_00232666 TCONS_00223731 TCONS_00032894 TCONS_00223736 TCONS_00223726 TCONS_00054102 26 XLOC_137019 XLOC_123551 XLOC_123557 XLOC_137028 XLOC_037432 XLOC_038320 XLOC_137017 XLOC_042224 XLOC_123553 XLOC_038321 XLOC_052607 XLOC_113730 XLOC_037434 XLOC_142141 XLOC_019131 XLOC_068136 XLOC_137020 XLOC_113687 XLOC_142137 XLOC_085245 XLOC_142151 XLOC_137030 XLOC_019130 XLOC_137035 XLOC_137025 XLOC_031911 NonCoding TCONS_00232652 XLOC_142137 NonCoding NonCoding - 8:74490841-74491032 - TSS174156 191 1 0 8.90426085981827e-05 8.76827517498378e-06 0 0.000287433013846503 0.000585912641117323 0.000113036814934289 0.000177427910463942 0.000253192613927691 0.000640987344614641 0.000341677935697874 4.39459328713284e-06 0 2.62892366971657e-05 0.000834897381702216 3.42492077909802e-05 0 0 0 9.38603191696777e-06 5.02019017068405e-05 0 0 1.20079109953236e-05 0 0 0 1.02253888664862e-05 0 1.69445320918666e-05 0 XM_002707870.2 LOC100297422 PREDICTED: Bos taurus olfactory receptor, family 5, subfamily D, member 13-like (LOC100297422), mRNA. 4e-22 107 73.77 0.942408376963351 0 noncoding 0 0 1 0 0.116881084633565 0.451925179500013 -0.751694190943773 0.000131260366214379 TGCGTGATTCCTGTCGGCTCATCTGCTTGACAATTGCCAGCTGAGCTGCGTGATTCCTGCCTGGTCACGTGCTTGATTATTGCCAGTTGAGCAGCATGGTTCGTCACTGCTGAGCTCCATGCTTATTGCCTGCTGATTGCGTGGTTCGTGTCTGCTCAGCTCTTTGAGTATTGCCTCCTGAGGTCCCTGTT TCONS_00228133 . 5' 66105 TCONS_00228133 . 5' 66105 EMBV3_20327 AATGTCCTGTGGCACACCTATTAATTTCCTAGGGTAACCGAGTGCACAGTTTTGGAAACC Gene GeneID:782848|KIAA1429:XM_002692817:148_cdna UTR3_Alt 3 NULL GeneID:782848 14 GENE KIAA1429 NULL hypothetical protein LOC782848 EMBV3_41001 AGAGAAGGACATCACGACCCACATCAAGAAGGAGTCTGACAAGAAGTACAACCCCGTCTG Gene GeneID:789121|LOC789121:XM_002687087:322_cdna Constitutive 0 NULL GeneID:789121 4 GENE LOC789121 NULL similar to dynein light chain 1 EMBV3_19513 AAATGTTGTGACCAGAGGCTCAAAGGAACCCAACCTGTTATTTCACTAGGAGCGAGGCCT Gene BVV0102_016339 - 0 NULL GK000021.2:31450484-31468074 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119137 TCONS_00119140 TCONS_00119138 1 XLOC_072822 Coding TCONS_00119137 XLOC_072822 Coding Coding PSMA4 21:31442571-31454061 = TSS89289 4785 1 TCONS_00119137_2 261 0.434900731452456 9 0.584298024197058 0.000281121080709579 5.38392385794161e-05 0.000315014614665907 0.000378839573991606 0.000187483216419965 3.85426219858047e-07 0.000152595389314588 1.55566583225059e-07 0.000225219409368219 2.70395944013024e-05 2.50759169629992e-05 3.83382790537389e-06 1.76088904277751e-05 1.11704348551594e-07 3.51040190582758e-05 0.0016877896953031 0.000616461213938223 0.000355101351053115 0.000189239755904646 0.000281851878251782 6.50198718721318e-05 0.0015396940637267 0.000109920591884271 0.000324897023989575 0.000814019344042374 0.000193935902654375 0.000239740142704852 9.25549192025253e-05 7.80353288410923e-05 1.77107866273031e-05 NM_001034381.2 PSMA4 Bos taurus proteasome (prosome, macropain) subunit, alpha type, 4 (PSMA4), mRNA. 0.0 2039 100.00 0.23594566353187 NM_002789.4 PSMA4 Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 4 (PSMA4), transcript variant 1, mRNA. 0.0 1559 88.23 0.255799373040752 TCONS_00119137_2 sp|Q3ZCK9|PSA4_BOVIN PSA4_BOVIN Proteasome subunit alpha type-4; 0.0 540 100.00 0.996168582375479 2 coding 0 0 0 0 -0.13312608554022 0.406739228894761 0.0503976640518375 0.404563007697793 CGTCCTCGGCTGCCCCACCCCCGGCGGTTCTGCGCACGCGCGGGGGCCATATTAGCAGCGGATACTCGGGCACAGTAGTGTCTTTCCCGTGGAGAAAGGTGCTCGGTGTCGGTCTCCACTCTTCAGCGTCTTCCCTCCGGAATTATCATAAACTTAAGAAAACATGTCTCGAAGATATGACTCCAGGACCACTATATTTTCTCCAGAAGGTCGCTTGTACCAAGTTGAATATGCCATGGAAGCTATTGGACACGCAGGCACCTGTTTGGGAATTTTAGCAAACGATGGTGTTCTGCTTGCAGCAGAGAGACGCAACATCCACAAGCTTCTTGATGAAGTCTTTTTTTCTGAAAAAATTTATAAACTGAATGAGGATATGGCCTGTAGCGTGGCAGGCATAACTTCTGATGCTAATGTTCTGACCAATGAACTGAGGCTCATTGCGCAAAGGTATTTATTACAGTATCAGGAGCCAATTCCTTGTGAGCAGTTGGTCACAGCACTGTGTGATATCAAACAAGCTTATACACAGTTTGGAGGAAAACGTCCTTTTGGTGTTTCATTGCTTTACATTGGCTGGGATAAGCACTATGGCTTTCAGCTCTATCAGAGCGATCCTAGTGGAAATTATGGAGGTTGGAAAGCCACATGCATTGGAAACAATAGTGCTGCAGCTGTATCAATGTTAAAACAAGACTACAAAGAAGGAGAAATGACTTTGAAGTCAGCACTTGCTTTAGCTATCAAAGTCCTAAATAAGACCATGGATGTTAGTAAGCTGTCTGCTGAAAAAGTGGAAATTGCCACACTAACAAGAGAGAATGGAAAGACTGTCATCAGAGTTCTCAAACAAAAAGAAGTGGAACAGTTGATCAAAAAACATGAGGAAGAAGAAGCTAAAGCTGAGCGTGAGAAGAAAGAAAAAGAACAGAAAGAAAAGGATAAATAGAAGACAAAATCAGGGATTTTATAACTCATTTGGGGCACCATTTCAGTGTAAAGGCTGTCCTACTCTTCCACTTTGAGAAAGCTTTGACAAACTTTTTTAACTTGTCTAGTGGGAAAATAGGACGGTACCAACTGAATTGGGTCCTTGTTATTTCTGTCCAGGTGAATATTGTAATAATGATTACTCTTTATGGACATCTTAATCACCCTCTCCCTCTTTTTTTTTTTTTTTTTGAATAAAATTTGGAAAGAATGGAAATGGTGAAGGGAAAAATTCTCTAGCAATAACTGTTGAAGATACCAGGATTAATAGGGCTGTGGTTTTTTTCATGAATGTAGTGTGGCCACCTTTGCAGTAACCTTTAAAAAATGGACAGAAATGTAAACAGCATAAATAGAGAAAGATGGGAACTGTGCAGTGGAGATTTCCTATTTTGTTCCCCTACCAACTTGGAGAACCTGTAGCCCAATCTGAGCAAAACAGAGAGCTGTCCTTCTAGGCCTCATCTGATATTACCCTATCAGAGGCTTGTCCAGTGAAATAAGTCACATTCCTCTTCTAGGTTTGCCAGCCTTTGATACTGATGGATATTCTTACTGGACTTAAAAATTGTGTGTGTGTATACACCCATACATACATGCAAACATTGTAAAACATGAAAGGCATAATTAAAATGAAAGCCCTATGTACCAACTGCCCAGCTCCAGAAGCAAATTAATCAGTACTTTTGAAGTCCCCTGTGTATTCATTTCAGGTCTCATTCTTCTCTCCTCTTGCCCAAGAGGTGACCACTACTGTGAGCCCATCGTTCCTGTAAGCTATGGGTCTTCCACTCTGGTTTTCCACCCCTCTACTCCAGGTGGTCCTGGTGGGTCTGTCAGTCAGAGAACCCCACTCCTGTCACAAAGGTGAGCACCTACCTCAGTCTGTAGGAATGGGTTTGAGAATGAACATGTGGACTGAGCCAGGCCAGATGTGATGTGGATATAAGGAAACGATGCTGAGGATTGTGCAGTAGACCAGCTGCCCACAGATGGCAGCACAAGCCACGTGGAAGGCTGAAGGAGGAACGAAGGCTACAGAGGAAAAGCGTGACCAAGAGATGAGAATAGTTCAGTTTTATCCAAGGGGTGCTCCACTGCTGAGATTTGCTCAATTCAGGTACACTGAGGATGCTGTCACTTAGAGTTCTCTGATGGAAGTGCTGAAAGGCAGTGCTACTTAAAGTGGTCTGTGGATCAACAAGCATCGCCTGGGAGTTGGCTAGAAATGCAGATTCTGGCGTCCTATCCCAAGCCTGATTCAAAATCTTGGCATAGAGCCCAGCAATCTTTTAACAAGCTTGCATGTGTTTCAAATGCATACCGAAGTTTGAGAAGTGCTTTGCTGCATATTGGAATCACCTTTATACCCAGGCTATGCATGTGCATGCAAAGTCACTTCAGTCATGTCCTACTCTTTGGTACCCTATAAACAGTAGCCTACCAGGTTTCTCTGTCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGAATCTTCCCAGCCCAGGGACTGAGCCCGCTGTTCTTTGCATTGGCAGGTGGGTTCTTAGCACTAGCACCGCGGGAAGCCTTAAGGAGTAGCAGTGCCTTGGAAATTTCTGTTTGCTAAGCTAATTTCCAAGCCCCTTTTCTTTTTAACTGAAGGATAATTGCTGTACAGAATTCTGTTGTTTTCTATTTACTCTTAATCTATACAGTTGGTTCTTGTTATTCATGGTAGCCATGTTCTGTGAAGTCAACATGAATACTGAATTAGCAAATTCTGAGGCCTCGCTCCTAGTGAAATAACAGGTTGGGTTCCTTTGAGCCTCTGGTCACAACATTTTTGTCAACACATCAATACATAACCTTGTTTTATGTGCGTTTCTGTTTAAAGACATTTAATATATATTGGTAATTCATTAATACTGAACTTATGACTGACAGCAGTTCAATTCATATCTAAGTGACGCTTATCTAACACACTTTCTTCATAAGGCACATCACGGCCTTCTTACGCTTAGGAACACTAGCCAGCATACACTGAGGGGACATTTTAAAAAGTGAAATCAATGAAAAGCACAAGAATTCAGAAAGCATAGCACAAAATAGACCACAAGGAGACCAGTTTTACAGTGTGAGCTGAAGCAAGAAGGCAGAGAGTGGCCCCTTGTTTGACTTCAGCTGGGAAGATGCATGTCAGGCAACAAATATTTCCGTGGCTCTGTGTGTGTCCACAGTGACCAGGAGAGCACCACTGTATTGGTTTTGGGGTTACGGAGAAACTTGCAAACAAATGCAGAATCCATAAATAATGAGGGTGGGCTGTTATAAAGTGACCTTTCAGTCTTGCTATGCACAGAAGTAGAGGTAGATGGAGATGTGACCTGATAAATGTTGTTGTCTTTATCTCCAGAATATATCCAGAATCTAACCATTTACCCCTGCAGGGACTCTGGTCCACACCACCATTCTCTCTCTACTTGGACTATCACTACAGTCTCTGCTGCTTCAATCAGTTCTCAGCACAGCAGCCAGAGTGATCCTTTGAAAATGTGATTGTGCTGCTGCTTTGTTCAAACTCTCCAATGGCTGCTTTTCTTGCTCAGTAAAAGCCAGGTTCTCTACACTTGTTTACAAGGTACCGCATACCCTGGCCCCTCCACTGCCTGGTCTTGCACCTTGCACTCCCTTCCTCACTCTGTTCGTAGGATGAGCCCCCTTGTTCCTTGAAGTACCAAGCCCTCTTCCATCCCCGGGCCTCTTGCCATTCCCTCTGGCTTGGGTCTGCTCTTCCTCTGGGGGCATTAGTATGGCCCACTCCTTCGTGTAGGTCTCTCTTCAAATATAGCCTTATTTGGCTACTTCATACAGAAGAGCAAGAAGGGCTTGCCAAGTGGCGTTAATGGTAAAGAACCTGCCTGCCAACGAAGGAGATGTGAGAGACATGCATTTAGTCCCTGGGTCGGGAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTAGTCTTGCCTAGAGAATCCCCGGACAGAGGAGCCTGGTGGGCTGCAGTCCATGGGGTCGCAAAGAGTCGGACATGACTGACGTGATGGCACATGCTACAGAAGAGCGGTCTACACCCCACCCACTCACGTTCTCCCTCTCCTTGCTGAGTTTTCTCCGTAGCACTCAACACTGTCTGGCCTGTTTACTGTCTGTCTACCCGCTGGAATATTAGCTTCCAGAGTGGGACTTTAATTCAACAGCTCTGTTCCAGGACCTACAACAGAAACTGGCACATAGTAGGCAACAAATAAATATTGATGAAGGAAGTGAATAGTGGCTCTTGACACGGTAGAATGAAATCCTGAAATACACCTCTTTTCCATGCAACTCAGTAGAAATGGTGTGTTTTCTATATTCTGACCACCTCTTCAACACTGTTGCTTAAAGTTGTGACAACTGCAAAGACTGTAGTGGATAAGAGAGCCTAGCACATTTTATCACCGCATTAGGAGCAAGTCTTCAGAACGTCACCCAAATGGTGGAGAAACTTCTACATATTCACCCTTTTGTTGAAATCATTTCCTACTTTGGTTGTGGGCTGGGCAGCAGGGACTATTCTATAACTGAATTTTTTTCCTGTTCTCAGGCCAACTGCTAGCCTAGATTCTCTCCCAGCCTCTTTTTCCTTTGTTATGTGGCCTATTTTTAGCCCTAGGTTGCAGAGTCCTCCAGTTCCTGATGATGCATCCCAAATGTAAGCCTAGCGATCCTCATCTGAATAGAGATGCTCCACAACAGCAGGCGT EMBV3_36882 GGTGGGGAGATGACATCACTTGGGTGCAGACTTATGAGGAAGGTCTCTTTCATACTCAAA Gene GeneID:618371|AGR3:XM_002686681:86_cdna Constitutive 0 NULL GeneID:618371 4 GENE AGR3 NULL similar to RIKEN cDNA E030025L21 EMBV3_35337 TCTCAAGTGACAGCTCCTTCCACCTGCAGAAATCCTCCATGCAAACATCAGACTCAGCTG Gene GeneID:100296249|LOC100296249:XM_002690570:231_cdna Constitutive 0 NULL GeneID:100296249 10 GENE LOC100296249 NULL hypothetical protein LOC100296249 EMBV3_31049 CAGTGGGAGGTGCGGGGGGACAACCTCTCCTTGGGCTATGAAAGCTGGATAATTTTATGT Gene GeneID:788039|ARL4C:NM_001102348:38_cdna Constitutive 0 NULL GeneID:788039 3 GENE ARL4C MGC152553 ADP-ribosylation factor-like 4C EMBV3_20173 AGGAATATCTGGAGCCATCCAGCATTTAGCTGGGATGAAAGACAGCAAGACAATTGTGGC Gene GeneID:521892|ETFA:NM_001075822:103_cdna Constitutive 1 NULL GeneID:521892 21 GENE ETFA NULL electron-transfer-flavoprotein, alpha polypeptide EMBV3_15338 CTACATCAAGCCTTCAGCAAAGGAAGGAGTGGCCTTCAACAAAGTGGTGTCTGTGCTCAC Gene GeneID:782624|LOC782624:XM_002687434:203_cdna Constitutive 0 NULL GeneID:782624 5 GENE LOC782624 NULL similar to olfactory receptor 769 EMBV3_15678 CTGGGTCAGCCACATCTTTGTCGCCAGGATCTCTCCACACTGGATGTTACCAGGTTGACA Gene GeneID:100271755|EIF2S3Y:XM_002700462:32_cdna Constitutive 0 NULL GeneID:100271755 X GENE EIF2S3Y NULL eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked EMBV3_30931 AGTCCCCTTCGACCTCGTTTAGTGCCAATGTTGTGTGTCGCACTCGTTGTTTAACTGTGC Gene GeneID:768039|HOXA5:NM_001077098:25_cdna Constitutive 0 NULL GeneID:768039 4 GENE HOXA5 MGC138007 homeobox A5 EMBV3_00422 CAGGAGTCACTGGTTACTGGAGGGTGTCCGAGTCATGTTGTTAGAAAGGAGAAGGCCCCA Gene BVV0102_322468 + 0 NULL GK000014.2:1678453-1681493 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30429 GGACCACCCGCTGCCCCTACAAGGACACGCTGGGGAGTCCATGCAGCCCAACCGCAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41758 GCACGTCGTGACCGGACACAACGCGGACGACATGGCGGAGACGGTGCTCATGAACTTCCT Gene GeneID:100297056|LOC100297056:XM_002695230:53_cdna Constitutive 0 NULL GeneID:100297056 18 GENE LOC100297056 NULL similar to ATP binding domain 3 EMBV3_13433 GGAAGAAAACTAGAGCTGTCAAATGCCTGTTCTGTATTCTAGTTACAACACAGGGTAGGC Gene BVV0101_038261 + 0 NULL GK000024.2:46290466-46300458 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07852 AGGGGTGTATTGGCGTCCCTTCCATCTCAGCCTGTATAAAAGTTCCCGGCGAGAGAAAGT Gene BVT0102_103802 + 1 EMBV3_31101 GK000005.2:28172817-28197983 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17518 CCCTCCCAGCCCATTGTCTTCAAGGAAGCCCTGCATAATGACCAGGACCACTTCAATCTT Gene GeneID:511239|MGC137211:NM_001046079:22_cdna Constitutive 0 NULL GeneID:511239 5 GENE MGC137211 NULL hypothetical protein LOC511239 EMBV3_00652 GCAGGGCCTTCCTGGAGAAGGTGCGCTGACCGGCGGTGAGCTGCCAGGCGCGCACTCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03616 CGGAGGCCTCAAAAAGTGTAAAATCTCCAGGTCCTGATGAAGTTGTAGGGCCAGAAGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22357 GGAGTAATAATCGCTTCCACCTGCAGAATACTGTCAAGAGCTTCACGTGCACTAACCCGC Gene GeneID:516730|OLFML2A:XM_002691603:174_cdna Constitutive 0 NULL GeneID:516730 11 GENE OLFML2A NULL olfactomedin-like 2A EMBV3_15894 ACCAACAATTTCCCGTATCTGGAAAAGACAGCCAAAGTGAGAATTCCAGAAGGCAGCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32756 TCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCGCCTA Gene BVV0102_054876 + 1 EMBV3_40345 GK000006.2:17831768-18335030 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00033204 TCONS_00063808 TCONS_00131535 TCONS_00240372 TCONS_00149042 TCONS_00210949 TCONS_00054133 TCONS_00131537 TCONS_00218950 TCONS_00147823 TCONS_00186557 12 XLOC_090915 XLOC_019438 XLOC_038534 XLOC_080240 XLOC_147036 XLOC_090919 XLOC_129459 XLOC_031942 XLOC_080242 XLOC_132269 XLOC_089710 XLOC_112609 NonCoding TCONS_00186557 XLOC_112609 NonCoding NonCoding - 4:28981025-28981694 - TSS138925 669 2 TCONS_00186557_2 107 1 0 5.04003842825042e-05 1.65220881881981e-05 2.6347800294678e-05 7.67128918004173e-05 8.04618190590629e-05 6.67340001743376e-05 5.02366887481601e-05 3.23543833301851e-05 0.000114776353102677 0.000100904156947909 2.52179144529941e-05 5.85168111144673e-05 9.65431640714993e-05 0.000139283126129092 0.000217891737511642 0.000570913133593805 0.000109102723715775 0.000139862620326037 5.3594374410669e-06 0.000294426402091814 6.63550157869369e-06 4.15164045014223e-05 9.51539900942328e-05 5.25334629035089e-05 1.81238148793375e-05 3.33537756756119e-05 2.66257992959201e-05 1.82949026561345e-05 0.000135697002898516 9.73582836758597e-06 XM_002698950.2 FRMPD2 PREDICTED: Bos taurus FERM and PDZ domain containing 2 (FRMPD2), 3e-11 73.4 78.32 0.212257100149477 0 noncoding 1 0 1 1 -0.00615637206504964 0.968424672851612 -1.02613056179786 0.00497382998682155 CAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGCTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAACACGAAGGGGCAGTTTTTCCGTGCATCGTTCGGAAAAAACCCCAGGTTCCAAATACAGCTCGACAAGCGGCCTCTCTCCCCGGGGACATCTCGAGAGGCAAGCGGAGTTCCATGCCTCAACCCAAGACGAGGCCTGACTCTCCTGTCCCCAGTCTGCAGGGACCCTGCGATCGGAGTCTGAAATCAGAGGTACCCTGCGGTTCCTGCCTCAACTGGAGATGAGGCCCTCTTCCAATGCACCAAGCCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGGCTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGCCCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAATGATGCGCTCCCCCTCGCCACTCGCA TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 EMBV3_30167 ATTTCTCCGGGACATAGAGCAGGTGCCACAGCAGCCAACATACGTCCAAGCCCTCTTTGA Gene GeneID:535298|GRB2:NM_001034630:2_cdna Constitutive 1 NULL GeneID:535298 19 GENE GRB2 MGC127576 growth factor receptor-bound protein 2 EMBV3_29353 CCAGTTTGGTTAGCTTGTTATGCAATATAAGTGAAATATCAGGTTTTTACTCCTGTGCCC Gene GeneID:785123|ZBTB10:XM_002692740:226_cdna Constitutive 2 NULL GeneID:785123 14 GENE ZBTB10 NULL zinc finger and BTB domain containing 10 EMBV3_07948 CTGCATCATTTCCATAGCCTCTCATGGGGTCTCCCTCTTTCCACCCTTGCTGTCAAGTTT Gene BVV0101_047212 - 0 NULL GK000002.2:28401736-29086670 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41982 CTCTCACCTGCACTCTATGATGTATGTGCTACTTATGTCCCGCCTGTCTTTCTGTGCCTC Gene GeneID:786689|LOC786689:XM_002691571:69_cdna Constitutive 0 NULL GeneID:786689 11 GENE LOC786689 NULL similar to olfactory receptor, family 1, subfamily L, member 6 EMBV3_23620 AGTGGCGTGGGGGCAATCATCCTGCAAGCCAACAGCAAGACACAAATTGAAGAGCCTTGA Gene BVV0102_278193 + 0 NULL GK000013.2:30684246-31202454 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044930 TCONS_00044932 TCONS_00044936 TCONS_00044926 TCONS_00044931 TCONS_00044938 TCONS_00044935 TCONS_00044939 1 XLOC_026314 Coding TCONS_00044936 XLOC_026314 NonCoding Coding - 13:30769864-31040545 - TSS32914 629 3 0.997687306044037 9.88040334046353e-35 0.000615721724895157 5.51097608085195e-84 5.41706525182796e-105 3.22579999281074e-16 4.35118151820758e-43 0.000160000963710269 2.64253731629742e-46 0.00421669251532948 0 0 0 2.21183798165836e-32 3.80999293194711e-225 5.67786298386427e-35 0 0 0 2.67773624878755e-52 2.42365502108676e-12 1.71074869455619e-234 0 0 0 1.89977166579593e-61 0.000128894273289707 1.3774175382535e-19 0 0 0 NM_005012.3 ROR1 Homo sapiens receptor tyrosine kinase-like orphan receptor 1 (ROR1), transcript variant 1, mRNA. 8e-06 55.4 100.00 0.0461049284578696 0 noncoding 0 0 0 0 -0.121990851072535 0.284364197136099 -0.0258156801926747 0.601002821548072 CCAGAGAGCTACGCTCTCTAAGTAGCTGGCTCCTGTGTTACTCTTCAGTTTGTTTCCCTGCCTATCATAAAGTTTGGTGCAAACTCTAGCTTGGTCTTGTGTCGCTGGATTGTTCGTGGCCGGCAGCAGTGGCGTGGGGGCAATCATCCTGCAAGCCAACAGCAAGACACAAATTGAAGAGCCTTGAGGGAGTGGTTCCTGAGCTGCACTAGAGGCGATCCCTAGGAAGAGATACAGAAAGCTTTGGAGCTTTGAAGGTTTAAGGGAAAGAAACCTGCAGCTAAATTTGAAAGGATGGACATCTTGATCTTGAAAAGGTCTTGTGGTGGTTTGAGATCCTGTTGGCTGTCTGAAGGGTGAGTGTAATTACGGCATTTTGGGACAAGAAGGTTTTCAAGAGCTTTGTTGGAACAGCAACATATGAGTAGATGAGCACTCCATTTCCATCCTGTGCATCATCTCAGTAGTCAAAGCAAATGAAATCTGATTATGAGCTCTGAGGTCCTAACATCCACAGCTGTCTTTATCTTGTAGCATTTTTGTTTGCTTGTTTTTTTTTTTTTTTTAATTGACTCCTTGGATGCTCTGATCTGTATCTCTATAAACAGAAAAAGAATAATAAATGAAAC TCONS_00044926 TCONS_00044930 s 5' 73070 TCONS_00044930 TCONS_00044930 s 5' 0 EMBV3_35318 GGAAACCAGGAAGTGAGTGCTTTTGGTGAGGAAGGTGAAGGCGATTATCTGGATGACTGG Gene GeneID:508463|SDF2:NM_001034321:79_cdna Constitutive 2 NULL GeneID:508463 19 GENE SDF2 MGC128631 stromal cell-derived factor 2 EMBV3_37156 GGAGGGGGTCACGCAAGACAGATCACCAAGTTCAAAGCTCTGCAATGTGGACACTCAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03594 ACTACCTTTCTGCCATCCCCGGAACATCCTTTCCCATGCCTACTGCCTTCACGTGGATAT Gene GeneID:528807|LOC528807:XM_002693269:29_cdna Constitutive 0 NULL GeneID:528807 15 GENE LOC528807 NULL similar to olfactory receptor 645 EMBV3_24239 ACAGCCTCCACGCCAAGCAAGGAGCGTCAGGAGTGTGTCTCAGTTGCCTTGTTCTTTTTA Gene BVT0102_058345 + 0 NULL GK000024.2:22099725-22131763 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138634 TCONS_00138636 1 XLOC_084697 NonCoding TCONS_00138634 XLOC_084697 NonCoding NonCoding - 24:22101992-22133322 - TSS103848 2604 4 TCONS_00138634_8 97 0.290706605222734 4 0.917009799227553 0.00355901115519467 0.00487435270366431 0.00364211652578672 0.0038481252830921 0.00110614755729634 0.00222549149582299 7.76117111390975e-12 0.0009128082994831 0.00200575387696803 0.000570812515211084 0.000721553374562852 8.0020077689721e-05 0.000236626542282516 0.000368070065795226 0.00033653011479841 0 0 0 0.00294980134191626 0.00387251040451229 0.000846282130533735 0 0 0 0.00381848533781153 0.00481091975036843 0.00304890294436823 0.000131005889550251 2.42349459102757e-05 2.30884655848037e-05 NM_001113257.2 HMGB3 Bos taurus high mobility group box 3 (HMGB3), transcript variant 2, 0.0 1427 89.50 0.405145929339478 NM_005342.2 HMGB3 Homo sapiens high mobility group box 3 (HMGB3), mRNA. 0.0 1483 85.64 0.495007680491551 0 noncoding GCAGCAGCTTTCAGAGTGGCTCGCTAAATAATTCCTAATCATAGTGCACAGACTAGAACAATTTTACAAAGCAAGAGAACAAATAATACAACTTTATACTTCAGCTGTTGCTGCCTAACAAACCACTCCCAATACTTCGTGACTGAAATAGCAGCTGAAATTGTTTGTAGCACTGCATGTGTGCATCATGCCTATATAAGTACCACCTGAAAAGCCCTTGGCATGCGTTACGGCTGTGTCTGCTGGGTTAACCGTGAGCGATTGCAACATGTCTGCTGCTGCTGTGCCAGTCAGGAGAGAATAAACCTATCTGCAGTTCCTACGACTCCTCGAATCTTCTTCCAGGTTCCCCGCTCTTGCCTTGCATACTGTGTGTTCAACGAACAGTGAGACAGGGGTCCTGGTTTCCAACAGTGTGAAGGAAGAAGTTCTGGAGGTTGGAAAGTTATGGACGCAGCATCATCAGATTCAGTGTCCTGTGAAGACCCACTTGTTCGTAAACTGGTGATTGCCAAGAATGGCAGCGGGATGCTATGTCGCTATATACAAGCAACAAGACAACCCGAAGCTGGATGGATGCCCACTGCCGTGTCCACAGGCCCAGCCCCGCAGCGCATGCCTGGAGCTACGGCCCCTCCAGAAGGCATTGCCCCCACAGCCTCCACGCCAAGCAAGGAGCGTCAGGAGTGTGTCTCAGTTGCTTTGTTCTTTTTACAAACTATAGATATGTACAGATGAGAACTCGGGACTTCTAGCCAATGACCATAGAATTAACACACCACCTTACAGATTTAAAAAATGCCAGAAACATCTTTAAAAGCCTTGTCACCCCAACAGCAAAGTGCACAGAGTGAGGAGAACACGAGACCCTTTTCGTTTTAAAAATGTTTGGAAATATGTACAGCTTTGATACAGTTTCTGGGTGCTCCAGACACCCATGGCCACTTTCTGTAAACCACTGACAATTGCTGGAGTGCTTTGAGAGACTGCCATATGATCATGATCCAGTTGGGTAATTAAACCTAATGAGGGCAACAGACACATCTCAAGTGAGAGGTGTGTCAGTCATGGCACTCCCTATGCTAAGGTATTCACAAGGAGACAAATCAACAGTTTTTTTTAATTCATCCTCCTCCTCCCCTCCTCTTCCTCCTCATCCTCTTTGTCTTCCTCTTCCACCATTTTCCCGGCAACTTTAGCAGGACCCTTGGTGCCATCAAACTTCCCTCTCGACTTATGGTCTGCAGCATCCTTCTCGTACTTCTTCAGCTTCGCTGCCTTATTGATGTATGGCTGCTTCTCACTGTCGCTTAAGTTATTCCACATCTCGCCCAGCTTCTTTGCCACATCTCTGATAGAGATGCCAGGGTGTGTAGACTTGATCTTGGGGTGGAATTCAGAGCAGAATAGGAGACATCCAGACGGTAGTCTCTTGGGGGCCTTCGGGTCCTTCTTCTTGCCTCCCCTAGCTGGTCCATAATCCTTCATTTCCTGATCATAGTGCATTTTATACGCCTTTGCCATTTCATCGAATTTAGACTTCTCTTTCCTGGACATGGTCTTCCACCTCTCAGAGCATTTCTTGGAAAATTCAGCAAAATTGACAGGGACTTCTGAGTTTTTCTTCTTATGTTCCTCTCTGCACATCTGCACAAAAAAGGCATAAGCACACATCTTTCCCTTTGGTTTCTTGGGATCACTTATAGCCATCTTGACTGTATTGTTTGCCAGTCTGGGCAGTGCAGGGCAGGGCAGGACGCGTGGCTCAGTACTCCACAGCCTCGCGCTAGCTGCCTCCGTGAGAGCCCAAAGTTTTGCATGTGTCTTAATCTGATCTCGGCATCTAATCTTGGCATTAACTTGGACCACAAGAGATGTGTAGTATTAGACAATTTCACAGATCAAGAAAGTCAGAGAGGTTAAACAAATTGTTTAAGGTCCCACAGGAAGTGAGTGGCAGAACAGGCTTGAACATACAGCTGTCTTACTGAGCCACTTTACTCCAAAGCTTGGGCTCTTAACCTCCATGGAACTCCAGACTGCCTTTTATAACTGGCTTCTCCTCTGTCTTTTTCTTATGCCTTGTGGTCAAGCCCCATTCTCTGAATGATTCTGCGTAGGAAAACGAATTGTGAAGAAATGAATTATTATGTGAAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAAGAGAAGGGGATGACAGAGGATGAGATGATTGGATGGCATCACCGACACAATGGACATGAGTTTGAGTAAACTCCGGGAGCTGGTGATGGACAGGGAGGCCTGGTGTGCTGCTGTCCATGGCGTCGCAAAGAGTCGGACATGACTGAGCGACTGAGCTGATTATGTGTTCTCATATGCAAATCAAAAGGACTGTTTCAGCAGGAGGGAAAATGTACTGGCAAGGAGCAAAGCCGTGCCACATCTCTGAGCTGATGGGTACAAAGGCCACACCATCTTTAACATTACTGTTGAAGACAAAGGTACTCAACAGTGTGGAAAGTCCGCTGTGAGTCATTTCCCTTTGTTAAGGCCAGAATGTAGTAATGGGAAGGGTACTTTTCACACTCAGTAGAAAATAAAATCAAAGAATGGGAA TCONS_00139897 r 5' 0 TCONS_00139892 r 5' 1257 EMBV3_22906 TCTGTCCACACGACCTGGATCACCCTAGACAGAACCCATGACCTTTCCATGACCTTCCTA Gene BVT0102_232516 + 1 EMBV3_06283 GK000018.2:56545054-56546191 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084304 TCONS_00084301 TCONS_00084299 TCONS_00084302 TCONS_00084298 TCONS_00084303 TCONS_00084297 TCONS_00084306 TCONS_00084300 1 XLOC_051519 Coding TCONS_00084297 XLOC_051519 Coding Coding PRMT1 18:56534809-56546131 = TSS63175 2409 1 TCONS_00084297_3 353 10 0.788092924653299 0.00302656522575395 9.9553782685943e-05 0.00309859553748982 0.00246481142945468 0.00354927685504655 0.00113604187858821 0.00130025210534542 0.0006414370265341 0.00252558301891607 0.000497230670885307 2.49894969852174e-13 4.9630578467792e-06 0.000448550355705775 5.76250755361846e-14 1.45085951643699e-15 0.000406899485655544 3.34271720636095e-10 0.000626631482751475 0.00210423827029428 0.00187984545431979 5.91337632082494e-05 2.13104559313779e-06 0.000245076227458553 0.000164474476686511 0.00169793848583749 0.00131718977366686 0.00109667816607738 1.84857355198391e-09 1.07447931070503e-05 1.26708113582094e-09 NM_001015624.1 PRMT1 Bos taurus protein arginine methyltransferase 1 (PRMT1), mRNA. 0.0 2354 99.92 0.542548775425488 NM_198318.4 PRMT1 Homo sapiens protein arginine methyltransferase 1 (PRMT1), 0.0 1988 93.04 0.551266085512661 TCONS_00084297_3 sp|Q9JIF0|ANM1_MOUSE ANM1_MOUSE Protein arginine N-methyltransferase 1; 0.0 726 94.88 0.997167138810198 6 coding 0 0 0 0 0.051121666033404 0.797219144240379 0.051121666033404 0.797219144240379 GCGGAGAAAGGGGGGGGTCTCGGCGGCCGGAGGAGGAGTAGACGCGGGTGAAGATGGCGGCAGCCGAGGCCGCGAACTGCATCATGGAGGTCTCCTGTGGCCAGGCAGAAAGCAGCGAGAAGCCCAACGCTGAGGACATGACGTCCAAAGATTACTACTTTGACTCCTACGCTCACTTCGGCATCCACGAGGAAATGCTGAAAGATGAGGTCCGCACCCTCACATACCGCAACTCCATGTTTCACAACCGGCACCTTTTCAAAGACAAGGTGGTGCTGGACGTGGGCTCGGGTACAGGGATCCTCTGCATGTTTGCCGCCAAGGCTGGGGCCCGCAAGGTCATCGGGATCGAGTGTTCCAGTATCTCTGATTATGCGGTGAAGATCGTCAAAGCCAACAAGTTAGACCATGTGGTGACCATCATCAAGGGGAAGGTGGAGGAGGTGGAGCTCCCAGTGGAGAAGGTGGACATCATCATCAGCGAGTGGATGGGCTACTGCCTCTTCTACGAGTCGATGCTCAACACTGTGCTCTATGCCCGAGACAAGTGGCTGGCACCCGATGGCCTCATCTTCCCAGATCGAGCCACGCTGTACGTGACGGCCATCGAGGACCGGCAGTACAAAGACTACAAGATCCACTGGTGGGAGAATGTGTACGGCTTCGACATGTCTTGCATCAAAGACGTGGCCATCAAGGAGCCCCTGGTGGATGTGGTGGACCCCAAGCAGCTGGTCACCAATGCCTGCCTCATCAAGGAGGTGGACATCTACACAGTCAAGGTGGAAGACCTGACCTTCACCTCCCCCTTCTGCCTGCAAGTGAAGCGGAACGACTACGTGCACGCCCTGGTGGCCTACTTCAACATCGAGTTCACCCGCTGCCACAAGAGGACCGGCTTCTCCACCAGCCCCGAGTCCCCCTACACTCACTGGAAGCAGACAGTGTTCTACATGGAGGACTACCTGACGGTGAAGACAGGCGAGGAGATCTTTGGCACCATTGGCATGCGGCCCAACGCCAAGAACAACCGTGACCTGGACTTCACCATCGACCTGGACTTCAAGGGCCAGCTGTGTGAGCTCTCCTGCTCCACTGACTACCGGATGCGCTGAGGCGGCGCCCGGCTTCTCCCACCCCAGCCAGGCTGGCCCTGCAAGGGCCCAGGGGCTGTGGCGTTCTTAGGCGGTTTCGGGGCTCCCCCTTCCTCTCCCTCCCTCCCACAGAAGGGGGTTTTAGGGGCTGGGGGTGGGGGGGGCACATCGTGACTGTGTTTTTCATAACTTATGTTTTTATATGGTTGCATTTACGCCAATAAATCCTCAGCTGGGATGGCACCTCAGCTTCCTGGGGGGCACGGTGGGGTCGGGGTTCTGTCTGCAGGTGTCCAAACCACCCAGGACACAGAGACAGCACCCGCTGGTGGCTTCAGGTCTCTGTTACCACTTCTGTGTCTCTGGGTCTTGCTACCTTTCCCCAGCCTCCTGGATTCCACAGCCTCCACTCTCAAGTCCCACCTGGCCCTCAGCTCACTCACAGGGTGGTCTCCACTGGCTCTCAGAGTCTGCCCCCCGCCACCCCCATCTAATGTCTCCTCCTGTCACAGGGGCCTCTGCCGGGCTGGGGGAGGGCTGGGGTGTGGATTTCCAGCACAGCTGGCCTCTGAGGTTTCCCAGAAGCCCTCTCTCACGCCTTCCCCCATCACACACATTGTTCCTCTCGGGCTGTTTTTTCCTGTCCAGGACCCTCCAAGGCCAAACCAAGGCTGATTGGCAGTGCCTGCTGCCCTGCCCTCTCCACCTGGGGAAACTGAGTCGGGGGTGGGGGGGCGGTTCTTTGTTGGGGTGGCTGCCTGCTTCCTCCCTCAGCCTGGCTTGGAACTCAGGGGGTTCCCACCATCTGCCCCACCTTGGAGATGCACACTGAGACCCCACTGGCCTTCACCGCTCCCAGTGACTGGCTCTCCAGCCTCTGCTGCAGACGTGGTACCTGCGCCTGCCCACCCTGCCCTTCCCAAGGCCATGTCCCAAAGTCACTGGCCCCCTAGGTCTCTGTCCACACGACCTGGATCACCCTAGACAGAACCCATGACCTTTCCATGACCTTCCTACGGCTGCTTCAGTACAGCTGAAATGCTTGGCCTGCTGGCACCCCACACCCATCTGCACACATTCCTCTTCTACCAGCATGGTGTTAGGGTCCAAGCTGACTCCACGACTTGAGGTGCCTCAGTTTGCCGCCTGTCCCAATTGTCAGTGCCCCGCATTGCCCAGCCCCCGCCCTGGAAGTCGCCTGTCCCTTGACATTGCTGTGCCAAAACAGCAGAAGAGGGTGAAGTCGCGCCTTGCAGCATCCCCGCCCCCAGTCCTTTCCTGGAAGCCCTAAACTGCGTCGCCACTCGCAGGTGTC EMBV3_08782 CCCTTTGGAAAACCTGAGTCTTTGCACATGTCATTTCCGGAGCCTACCTCAGTTCAGCAA Gene BVT0102_005432 - 1 EMBV3_28674 GK000012.2:30558211-30586733 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035039 TCONS_00035042 TCONS_00035045 TCONS_00035041 TCONS_00035046 TCONS_00035043 TCONS_00035044 TCONS_00035038 1 XLOC_020815 Coding TCONS_00035043 XLOC_020815 Coding Coding KATNAL1 12:30503872-30562730 j TSS25747 6233 1 TCONS_00035043_3 490 11 0.894286151179979 0.000516334620022405 0.000439296329533022 0.000589886542013245 0.000393853682876374 0.00132286197774882 0.000413112290535873 0.00055899908329621 0.000792788486075266 0.000765456041783443 4.49236564862587e-05 3.41720013382216e-09 3.05443746273272e-09 1.15164126532446e-05 6.29158440595443e-12 0.000303821368709535 0.000406528047817165 1.43737153773155e-08 3.1288256178964e-08 0.000844295844584396 0.00123875502227839 2.86687216770629e-05 5.2678194942546e-05 1.14521735393592e-08 0.000552918778755883 0.00111755550670747 0.000808610776778139 0.000657750635349442 9.71071326002452e-09 2.53803973374408e-12 5.14265925023505e-09 XM_005213666.1 KATNAL1 PREDICTED: Bos taurus katanin p60 subunit A-like 1 (KATNAL1), 0.0 1.067e+04 100.00 0.948660356168779 NM_001014380.2 KATNAL1 Homo sapiens katanin p60 subunit A-like 1 (KATNAL1), transcript 0.0 2426 83.17 0.374137654420022 TCONS_00035043_3 sp|Q9BW62|KATL1_HUMAN KATL1_HUMAN Katanin p60 ATPase-containing subunit A-like 1; 0.0 957 97.14 0.997959183673469 3 coding 0 0 0 0 -0.107518204880966 0.549539452838464 -0.0488323207413693 0.491773324005089 ACTACAAAGCCCGGCGGCCCCGACAGCTGAGAAAGACCGATAAACTTTGAGCCGGCCAGGGGAAACAGGGAGACTCTGTCTGTGGTGAGGGGATTCTGGGGTGGTCGCTGAATGGGGTTCTGAGAGCTAAAGGGGAAGTGGAGATCTCTGAAGGATGAATTTGGCTGAGATTTGTGACAATGCAAAGAAAGGAAGAGAATATGCACTTCTTGGAAATTATGACTCATCCATGGTATATTACCAGGGGGTGATCCAGCAGATTCAGAGACATTGCCAGTCAGTCAGAGACCCAGCGGTCAAAGGCAGATGGCAGCAGGTTCGGCAGGAATTATTGGAAGAATATGAACAAGTTAAAAGTATTGTCAGTACTTTGGAAAGTTTTAAAATCGACAGGCCCCCAGATTTCCCTGTGTCCTGTCAAGATGAACCGTTTAGAGATCCTGCCGTGTGGCCGCCCCCCGTACCTGCAGAACACAAAGCTCCACCTCAGATAAGGCGTCCCAATCGAGAAGTAAGACCTCTGAGGAAAGAGATGCCAGGAGGCGGCGCCCGGGGACCTGTAGGCCGAGCACATCCCATATCTAAGAGCGAGAAGCCCTCCACCAGCAGGGACAAGGACTGCAGAGCCAGAGGGAGAGATGACAAGGGAAGGAAAAATATGCAAGATGGTACAAGTGATGGTGAAATTCCAAAATTTGATGGTGCTGCATATGATAAGGACCTGGTGGAAGCCCTTGAGAGAGACATCGTCTCCAGGAACCCAAGTGTTCACTGGGATGACATAGCAGATCTGGAAGAAGCTAAGAAGTTGCTGAGAGAAGCTGTCGTCCTTCCCATGTGGATGCCTGACTTTTTCAAAGGGATTAGAAGGCCATGGAAGGGAGTGCTGATGGTTGGGCCCCCAGGCACTGGAAAGACCATGCTGGCTAAAGCCGTGGCCACCGAGTGCGGCACAACCTTCTTTAATGTCTCCTCTTCCACACTGACGTCTAAATATAGAGGCGAATCTGAGAAGTTGGTTCGTCTGTTGTTTGAAATGGCTAGGTTTTATGCCCCCACCACGATCTTCATCGATGAGATAGATTCTATCTGCAGTCGAAGAGGAACCTCTGATGAACATGAGGCAAGTCGCAGAGTCAAGTCTGAGCTGCTCATTCAGATGGATGGAGTAGGAGGAGCTTTGGAGAATGATGATCCTTCCAAAATGGTCATGGTATTGGCTGCCACTAACTTCCCATGGGACATTGATGAAGCATTGCGGAGGAGATTAGAAAAAAGGATATATATACCTCTGCCGACAGCAAAAGGAAGAACTGAGCTTCTGAAAATCAATCTTCGTGAGGTTGAGCTGGATCCAGATATTCAACTGGAAGATATAGCAGAGAAGATTGAGGGGTACTCTGGTGCTGATATAACTAACGTTTGCAGGGATGCATCCTTAATGGCCATGAGACGGCGAATCAACGGTCTCAGTCCAGAAGAGATCCGTGCACTCTCTAAAGAGGAGCTTCAGATGCCCGTGACCAGAGGAGACTTTGAGTTGGCTCTTAAGAAAATCGCAAAGTCTGTCTCTGCAGCAGACTTAGAGAAATATGAAAAGTGGATGGTAGAATTTGGATCTGCTTGAATTTCTGTCAGCTCTTTCATTTCTGGTATTTTTGTCTATAAAATGTGAAGAAATTCCAGCAATTTTTTTTTTTAAAACAGGTTTGAAACTTTTCATTGGAGAGATTTTTCTCTGAAAGGAAAACAATTTAAAACCACAAAGAGTATACATGTAGTTGAGAAATAAGAAAAGCCTACACAGAGAGCCTGACATTCACGTGTCCATGCGTTATGACTGCACACCCGCACCAGAGTGCAGAGGGCTGAAGAAAGTGACCCATGTGCTGTTGTAGAAACTCGTTTACAGAACATCTAGAAGGAACTCTGTTTCTGACTTTGCATTTTTTTTCCTCTTCTTTGCTCTGAACATGAAGGACCTGTTTCTGTTGACTTTTAGCATCAGAACAGGGTTTGTGTCAGAACTGTTCCTTATTGTGAAGAGTGATAGTTTTGGAATAAATAATGAATCTGCTAGTTAAACCTTCAGCATTCAACCACTACTGTTAGAGGCTGTTATACCGTTTGAATGTTTACCTTCCCTTCCCTCACCATTTCCTCCACTAGCTATTTAATCACTTATTGAGCTTTGTGGGGGTGTATAGCTTCATGCTTTGTGGTTTTTGAATCATCTTGCCAGGTGGCTCCTCTGGTCTGGAGTATTTTTGCTGGCAGTACTTCATATTGGAAGGGCGGGAAAAGTATCATGTTTGCATAAGACCTTCCTCTTCGTTCTAGACTTCTGAGTTTGTTTTCACTCTTCTTTCAATAAGTTCAACAGATCAACCCTTGCTCTAACATTGTTTTTTGCTGAATTTGCCTTTCGTATTCTAAATAAATGCTTTGGTATTCTAAACAAGTCCACTCTCTTGTGGCTAATGCAAAACAAAGCAAACTCTTTATGGTTTCTGGACAGCTTGTTTATTAACAAAACAGCATCGTGCGTAATGAATGATGTTCAGTTGAACGTTTAGAAACCATTCCTTGTCTAGGTTGAGTGCTTGTATGCACACTAAGGTTAGGTTAGAAATCAGCCTTGCTCATTCACTTCAGCAGGAATTAGACAAGAAGGAGGCCAGAAAAAGAGAGGCCGTGTATCTAGTTATGAGTAGCCGAATGTTAGTTTTTAAAAATTGTTATTTTGACTGGGCAACCTATGCTTTGATAGTCAAGCTTTAAAAAAAATTATATTGGATGGTATCCTGAATTTTTAATTTTAGACAGTAGCTAATAATTTAAAAATAATACAGCTTTTTTCACAGTTGAAGATAACTTTTAGCAACTTGCTTAGGAGCTTTTGCCCTACTAAGACTATGTAACTTTTAGATAAGTCTGACTCTGACCTGCAGTATTCATCTGATGCTTTAAATCGCCCTCCCCCTTTCCTCTGAGGCATAGATTAAAAGAGATAAAATCATGAGATATCATGATTTTAATTGAATTAGTTCATCTTAATTCCTTTTATTCATGAACTTTTAAAAATAAATAATCCCACTAACATAATCTTGCAGACTACTGCCAGCCAGTAGCTTATTTTTTTCATGAAATCCAAGGGGTCATGGTTAAAACCTTAGTGTTTTGATTGCCAAAAATTTTGTGTATGCTAGTTGATTAGTTAGACCATATTTCTAGATTTTATGTTATTTGTCTTGGCTTCTGTTTCAATTTTTCCTGACTTCTTCATGCATAATAACATAGTGATTGTGGTTTTTTAAAAAACTGTCAGTTGGTTAGTTCCTGGAGCTTGTCTTCACTGTGTTCCGTCAGTCGTGTGTGCTTTTTCACTTCCCTGGTTTTTCTGTAGAGGATGGTGAATGCTCGGTATGTCTTAACCCCTTAAAGGATCCTGGCTCTAGCTAATGAAAATGAAAGGCACGGTAACCTGTGTGTGCTTTGGAAAGATTATATATGAAAGTTTTTCTTTCTCCAAATTTGCTTTAAAATTAGAACTGGAATCCATTTGCTTGAACAATACAACTGTTATAGACCTGGCTGTTTACAAGAACCATTTTTGCCATTTCCCAAGCTACATGTTTATTCTGAACATGTACACATGTAATTGTGGAGAACCTGTAAACCTGTTACATGTTTATTGCAAACATTTTGCTTGGATAATTCCTTTGTTTTTAGAAGGAAATTAATATTCATGAAATGTGCCAGACAAATGGCTGAAACCTTCTATAAATCCAAGTAGAAAGTAGACGTTGGCGTCCAGATTTTGTCTTCTAGTCAGCAGCGTCGTCAGCGGTCCAGAATGACCAGATACGTGCTGGGCTTGGACCTCTGCCTCCAAAATGCCAGGACAGCTTGAAAGAAGTAGCACGCTATGTTCCAGCTGCCTGTGGGGGCTTTGTTTGGGCTCTGGAGATTGCACTTTTTATGATGTGATATTTGACTGTCAAAAAGTAGGCTGAAATCGCTAATTATTCAAAAAATGAGCAAGTGTCTGGTGAATCTACTGTAAACAAACATATAGCTGCTACACCAGGAAAAATACACTGCCCAGATTTTCAATATAATTGTCACTCTTCCACTTCGCTACGTGTAGGCTGACTCTTTGAAACATGACATTATTGATGCCGTAGGTTTTGAACAGCTTGAGTTTGAATTCCTTCCTGGGAGGTTTCTGTATACGCTGCTGAATCCATGATGAGAATCATAGATCAGCTGACACTGTTCTGTTTTTACTCTCCTGACCCTGAAGGACTTAGAGGTCCAGTGAAGGACAAGGCAGGCGTTTGCTTGTCCTGTGGGCTTTGGCTCCTCTGGGTTGTTTTGATCATTGAGTCTTGGCATTATAGATTCCCACACTTCCGTTTCTCTTGCGAACAGTAAGTCACCTTAGGGTATTTCCTGTGTGTGATAGGCATAGAATGCTAAGGGTAATTGCTGGCCTTTTCCAAGAAAGGGCCGCTTTAACCCCATAAGGAAGCAATGGTAGTCATTCTTTTAACATTCGTTTTGTATCTTCTGTTCCATAACTGTTTTGATTGTATAGATTTGTTTATATACTATATATACTACTTACTTTGTGATGTACATAATATTTATGTGAATTTAAAAATCTGTCACAATAGAAAAGGGTAGGAATTACAGTTGGAAGGCATATTGGAGGAATTCAGATATTTAAACCCCAAATGTTTTAGTCTCATTGCTGCTAACTTTTTTTTTTCAGAAAAAGCTAAAACCACATTATAATTACTGTGTTTACTTATTTATACTTTTAAATTAGGCTTTTTATACTCACTTATTTAATTTTTTAGGACATTTGCTTTTAATGTTGTTTTCTCTTGTGGAAACGATATGAATATTTAAAAAATAAAGCCCTAAGTAACACTTATGTTTTTAAACATTCACAAATTGACAATAATTCTTTGCATTTTTATTAGTTTTTTTTTTGGCTCTGAATAACTCTTTAAGTTGAGGGATATTTCTAAATTTCCAGTTGACTTGTTAATAAAAACAGGAAAAATATGAAGGTAATGTCATCAGATTTAGTTTTTTTATTTTCCGTTTCTCATTTCTTGATTGATTTTATTATATATATATATATAAATAATCTAGATTCTGCTTTGTCACCAGCAGTGTGTACATTTCTGGAAATTTGGCACAACAAATAGGGAATTAATATGGAGGTTTTCCTCCAGTGAAAGGACTCTGATTTTATGTTCAAAATTATAAGACACACTTTTGTTCTCCAAGCTCTGAAATGACTAAATATTACCCTTTGGAAAACCTGAGTCTTTGCACATGTCATTTCCGGAGTCTACCTCAGTTCAGCAAGCTTAGTTTCACGTGGGAATGAACTGAACCATGTTGAAATTCAGTTCATCATCTAGGCAGATTTGTTTTTTGAATCGCTTCCTTCTCTCTCCTCTCTCACTCACTTTTTTTTTTTTTAACACTGAAAGTTTAATTGAAGATGCTGGTGGTTCTTCCTCTGGCAAAGTCACACCCTCCAGTTGAAGCCTCTGCAAATATCTACATTAGTCTTCCCACCTCTGTCACGGCGGCTTGACCACCAGTGCACACTCGTGTGGCAAGGACCTAACCCTTCCTGTACAAGGGCCTGAGTGCTTCGTGATGACACACAGAGGTGGGCATGCGACACGTCCATTCACACGGCAGCAACTGATGCCCTCGGTTAAGGCTGTGCAGACACAGCGTCCAGTAAGATCGCTCTGTGCTGTGACCATTGGTGTTCTGTTAAGATTCTCGTTTCAGTGTCTGTGTCCCAGTGTTTTGAACCTAACTTAAAAAGATGTTTCCAAATTGTATTTATTAGATGTGCTTTTCCTTACATTTTGTGTGGCCACATTGCTAGTTTCACGAGCTGAGCTGTGTCTGTGCATAGAGTGTAATTTGGTAATAAATTTCTAGAGCGTGGCTTGTCGGTGTTTTCTTTGTGGTTCATGTTTGATTTACAGTCTCTAGTCCACTTATTGCCACCAGTGGGAGTAACAAATCCCTCGCAACAAGGGATGACTTTTTCCAGAGTTTTAGTTCTTACAAAATCACATATTGTAAACCCATTATTTTGTGTTTGCCATGCATTATGCTAATAACTTCAGGCTTGATACAGGTAAGATAAGAATGGCTTTTCAGTTAATTTTCTTTTAACAAATACATTT EMBV3_00986 ATCTGACAGTTAGTGGCTGGTTGGGGTAGTGTGTGTTGGGAACCACAACAAAGCTCAGAG Gene BVT0102_030821 - 0 NULL GK000009.2:55015672-55111016 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237406 TCONS_00237407 TCONS_00237409 TCONS_00237408 1 XLOC_144712 Coding TCONS_00237406 XLOC_144712 Coding Coding MANEA 9:55106529-55194784 j TSS177491 5706 1 TCONS_00237406_3 233 0.0569575885033298 4 0.935391030434881 0.000619967012254903 0.000231195216576025 0.000518163607580247 0.00023728801210426 0.000463333080742327 3.75766479812959e-16 0.000376342975519116 0.000278674394333329 0.000791279286221488 7.41982744062616e-05 8.963896926875e-05 6.4525455001397e-05 0.000113904774728242 0.000243777920772855 0.000303429621340358 0.00053200188287964 0.000493152020570323 0.000733261404875405 0.00047878441903295 0.000860904115108746 0.00017309386318372 0.000322518346531986 0.000210300561427036 5.47735099431853e-07 0.000581830033189516 0.000723480761671806 0.000513444478899865 5.33085940769623e-05 4.54353764708192e-05 9.10964499955844e-05 XM_005210863.1 MANEA PREDICTED: Bos taurus mannosidase, endo-alpha (MANEA), transcript 0.0 1604 100.00 0.155625657202944 NM_024641.3 MANEA Homo sapiens mannosidase, endo-alpha (MANEA), mRNA. 0.0 1061 78.97 0.214335786890992 TCONS_00237406_3 sp|Q5SRI9|MANEA_HUMAN MANEA_HUMAN Glycoprotein endo-alpha-1,2-mannosidase; 1e-138 401 83.56 0.96137339055794 0 coding 0 0 0 0 -0.043042072207658 0.721464613902035 -0.0333431878408798 0.599322800206735 CGGGAGGCGGGGCTGCTCAGGCTCACTGCCGGGCAGCAGCGGGCTACCTCTGCTCTCAGCTTCAACGTCTCCGCTGGCTGATCCTCTTCTGGTGTCTGGATTCCCGGACCCTGTTGGTATGGAAATCCACAATTTGATGGTAAATATATACATTGGAACCATCCAGTTCTCTCACACTGGGACCCTCAGATAACCAAGAAATATCCCAAAGGGAAGCACAACCCCCCTGATGACATTGGCTCCAGGTTTTATCCTGAGTTGGGAAGTTACAGCTCTCGGGATCCTTCTGTCATTGAAACTCACATGAAACAAATGTACTCAGCTTCAATTGGTCACTTTTCATATTGAACCATATAAGAATCGAGATGATAAAACCATGTACCAAAATGTCAAGTACATTATAGACAAGTATGGAAATCATCCTGCCTTTTATAGGTACAAGACTAAGAACGGCAATGCTCTTCCAATGTTTTATGTCTATGATTCCTATATCACAGCATCTCAAAAATGGGCCAATCTTTTAACCAGCTCAGGGTCTCAGAGCATTCGCAACTCTCCTTATGATGCATTGTTTATTGCACTTCTAGTAGATAAAAAGCATAGATACAGAATTCTTCGAGGTGGTTTTGATGGAATTTACACATACTTTGCCACAAATGGCTTTACTTATGGCTCATCCTATGAAAACTGGGCTAAGATAAAATATTTTTGTGATCAGTTCGACCTAATGTTCATCCCAAGTGTGGGCCCAGGATACATAGATACCAGCATCCGACCATGGAACTCTCATAACACTCGTAACCGAATAAACGGGAAATATTATGAGACTGCTCTGAGTGCTGCACTCCAAGCCCACCCCAGTATAATTTCCATCACCTCTTTTAATGAGTGGCATGAAGGAACTCAGATTGAAAGTGCTGTTCCCAAAAGAACCAGTAATATCGTGTACCTGGATTACCGGCCTCATAAACCAAGTCTTTATCTAGAGCTAACTCGCAAGTGGTCTGAAAAATACAGAAAGGAAAGAGCAATTTATGCATTAGGTCACCAGGAACTTAGCACACAACCTGTTTCTTAATGGATTGACTTAAGTTTAATAATTACAGAAATTACCTAATTTCAATACATTCCTTTTGTTTTGGGTTATGGGAAGAAAACTGTCAAAATCAATATGTACTGTTACCATTATCTCTAATAAAAATAATTTGTACATTGTTAAGGATCGTAATATCATTGCCACCTTTCACAGTGTTACACTGAGAGAAAAGTGCAAATAATATTCCTTATGGCATAAATTTGCTGAATCTGTGACTGGAATTGAAATCTTGCTTTGATAGCTGTTTCTATTTCACAATAGGCAATTGCTTGCATTTCAGAGAGTAGTTAGCACACAATCCTACTAGTATTCTGCGCCCAAAGAAATAGAACTGTGTATATATTTGATATGTCTGTTGAAGAACAAAGATGTAAAAGATAATACACATGGTTCATTTTTTAATGATCTAATCAGCTTTGTCCTATTAGCATTCAGACTCTGGAAAACGTTCCAATAATTCTTCAGAAGAAAATATGCCTTAAGCCTTACTGAGATGAAGGCCTGCTTTCTGTAACACAATATATATCATCATATGCAGATTTCTGGTTTCCTAGAGCTTGCTAGGTATTTTGCATGTCTGATGTTTCTACTTTGTAGTGATGAATTCCAGACTTCAGAAGGAAAATCTTTTCATAAAGGCTTTTCATAAAAGTTAAGAATTGCTTCTCAGTTATTGAAAAAACATAGCCAATTTACAATTATTCTGGAAATACAATGCCTAAAATACTATTTTTAGGGTATCTTGTCAATCTTTAACTTGTTTTATTATTCATGATTTTAAATTTAATTACAGATGAATTGTTAAGAAAAAGTTGATACTAACATTGGATTGCCACCTTTTAAGTTTTTAAGCTATTTTTACCAAAACTAATAGAGAAAATTTACTTAGCATTTCAGATTTTAAGGTTATGGAAATAAAATTTCATTCCTATGTTTGACTTTTTATTAGATGTAACATTTAATAATGGAAATGTTTTATTTAAAAGACTTTAAATTATTGTATATAATAATATCCCCATCTAAAAACATTATACTTTTATGTTACCTAACAGGATAAAGACTTGTGGTCTGTTGTCATAGTGTGACAAATTGATCATCTGTAAAAAATGAATTTCTTTAAAAACTACAGAATAAAAGACACTCTGTTATTTTAGTTAATATTTGTAACTAGAACTATAGAAAAAAACTAATATATAATGCTCTTACATGAATATTTTTTAGATATTTATTAAATGTCAGCAATATAGAATACATATAGTCAGAATATAAGGACATTCATTCAGAAACAAATAGTGGAATTTGTCATAAATGTCATTGTCTACTGAGTTATTTTTAAGCAGTGCTTTCAAAGCAAACTATTATGTCTTTGAAAAGAGGCATGATTAATGTTAAATTGATTTATAACTTGAGAATTTGCCATATCTCAGAATATTCAGACCATGGGAAATTAGTACAATGGTAATTAGTAAATTCACTTTCTAGAAGAGATTACAAGAATAATTCACTATTGTATTATAACCATATTCATAGGAACACTCATACTGATATAACCAGTGGATTTTTTTTTTGTTTTTATTATAGTCAGTTTGCCACTATATGTTTTATTAGGGATAAACTCTAAATATGTCATACCTAATAATTTTTATTACTTACTATATTTTATTAAAGTTTAATTAGATATCTACCACACAGGAATTTTTGTCTTTGCTTATGTTATATGCTTGAACCCATAATAGACAATTTTATGAAATAGTTCTGAGGTTAAGAGAAAGTATAAAAAACAAGGTCAGAAATCCTCAGCACGGACACCACCATTTGTCTCCTGCTCTCATTACAGATATAGATCATCTAGGATCACAGACTCACCTCTGAGCTTTGTTGTGGTTCCCAACACACACTACCCCAACCAGCCACTAACTGTCAGATTTCAAATTAAGATAAAATAGATTCTGTCTTCATTGCAGAAAGTTAATTCTCAAGGGAAGAATGTTTGGAATCAGCTCTAAAGATAGTTTACTAATTTATAATTCTTTGAATATGTTTATTTTCTTTTTTAAAAAAAGTTATTTGAAAGAATTATCTCTAATAATTTTGTTATTCTTAGGGAAGAATGCTTCAAAATCTTCCTCAGGTATTCGTTACCATTTAACTCATAACAAGTTTAGATTGTATAATCACAAAAATTATTTGCTTTTATTTAATTCAATAAACTAAAGGAACCGTTTAAAGGGAGAAGTAGTGTAATATATATAATGCATGGATTAAAATGAATTATTATTTTAAGGTTTAATCGGGCTAATTTTTTTGACTGTATAGAAACCAAATCTTTCTTTTACTACTCTCTTTTTAAGGACTGATATTATAAAAAACTACTGTTATTAATGTTGATCTCAGTTCTATATTAATTTTTTTGTTTTAAGAGTACAATTTAAAAATGACTATTTTGTTATATAAAATAGTTAACTTTCATCTTATAAGAGCATGCACAGAATAAATTTTATCTTAGATATAAAAAATTATTTATGAAATATTTACTTTCTGATTAACAGTTAAAAAGTAGTATTCAGTCTGCACTCTATACAGCATTTAAAAAGAACACATCTTTTAACTGTACATACTTTTAAAATCTGTGAATTTGTGTTATATACAGAAAAATAAGAAACCATTTCCCAAATTTAAAAATTTCCTATTTTTTATTCTTTGAGCATAATCGTATTGCTCTGACATCCTTTAGGAAATTGATCTTTCCTGAACCAGCTCAGTTGGTAAAAAGTCTGCCTGTAATGCAGGAGATACAGGTTTCATCCCTGGGTTGGGAGGATCCCCTGGAGAAGGAAATGGCAACCCGTTCCAATATTCTTGTCTGGAGAATTCCAGGGACAGAGGAGCCTGAGTGACTAACAATTTCAGTTTCACTTGAAAACATCAAAGTAACAAACCACTAGAGAACCTACTAAGTTCCTGTGCTGTGCTGTACTTAGTCACTCAGTCATGTTGGACTCCTTACAACCCTATGGACTGCAGCCCACCAGGCTCCTCTGTCCATAGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAAGGGAACTTCCCAACCCAGGTCTCCCACATTGCAGGTGGATTCTTTACTGATTGAGCCATAACCAAACCTTTTTTGAAACTGACCAGAGTTATGAAATTTAAACATAATGACTGCTTATAAACTCTACAGTGCTTACATGTGGAAGCAGTCCTTAAAAGTTTTTACCTAAATTTTGAATTAAGGGTGGACACTTATGTGCCCTAGTGTAGAAGCAATATTTTTTTTTACTACCAGCAAAATTTCAGTCATTTTTACAAATATTAATGTACTTTAAATTGTATACTGATTGTTGTATGTCCACATAAAGGCTAAATGTTACTGTATGTTTAATGTAAGATGACTATCCTGGAAAATTCAAGTACGACTTTGGCTTACTTAATTCCTCCTTAGTCAAATCAAAGAACTTAGTGGTAGTGCTGTTATATTCCAACTATCAGTGAAGGGAAGAACGGTTTTCAATGTGACTAGATTTTGCTGTTGTTATAATCACTATTTATGAATCAAAAGGCAGAATAATTTAAGACCTAATAGGCAAGTAGTTGCAGATCTAAAATTTATAAGCTCAAAACTTGTAGCACTTTTTATATTGTATGTTCTAAACTTCATTTAAGGTAGCTTACATATTGAATTTATATAACCATAAATGTAACCATGAAGTTAAAATGCCTTTTAGAGTCTTTCCCATTGAAATAATTATTTCACTATACAAACTAATGATGTACCACAGTAGCGATAATTCTATATACAGTTCATTTATAGTTTATGATTGTGTCATCATGCTTTTGTGTTTTTGACTTTTTAAAAGAATAGGTTAAAAATCTGAACAATCATAAACAACACAAAGTGGCAGTCTTCAGCTACTTAACAGCATTTAAACTAAATGTATTAATTAAGGGATTATGTCCATGGAGAAAAGTCTTTTTGAGTCAGTTTTACAGAAGCCATTTTGAAAACACTATATATCACCATGTTAATTTGATGATAGTATCTAAAGTGACCTTTATCCTGATCTTGAAAATATCAAATCCAAAAGAGAAAATACTTTAAAGGAAATTCAGTTGTAATACATGCAATACATTTTAGAAATTTATGTTCGAACAGAGTCACTTAAGAGTAGCTGCCATACTTCTTCAGTTTATACACACTAAATTTATATTTCTTAACCACCATTCTATAATAACGTTTTTTAATCACCCATATTATCCATATGACAGACTATTAAGCTATTAGTATTATGATAGAGCAGTCCAGTCTGACATCATGTAAAAGTCAACTGCAAATCTGATTACTAAATTCTTCCTTGAAAATTTGCTGTGTTGTTATATTTTTTTAAAGTACATTCTTGAAAACTATGTTCTTGGTTTTTTAGATATCATGTAAGAACAATATGTAGTGACAGTCATTATATGAACAGTAGTTGAACTCAAATTGTATTTTTCTTCATATGAGTATTATGTGTTTGTAGCTTAAGGCTTAATTTAATTTGCAAATAAAATATTCCATTAACATAGTA EMBV3_18453 GTGCTGCAGGAGCCAGACATGGAGTATCAGCTCTCCCCACCTGGTGCAGGTGCGTGAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38822 CATTCTGTAAAAGTCTACAAGGTTGACTGGGGGTGATGGGGTGTGGTGGGGGTCCTGGGA Gene GeneID:538814|NHLRC1:XM_002697550:332_cdna Constitutive 0 NULL GeneID:538814 23 GENE NHLRC1 NULL NHL repeat containing 1 EMBV3_23655 CGGCTTCCAAGCGGGTCCAGCCTCTCTCTCCAGCCTTACACACTTCATCAGAGAATATTT Gene GeneID:532269|CMTM7:NM_001075960:146_cdna Constitutive 2 NULL GeneID:532269 22 GENE CMTM7 MGC140576 CKLF-like MARVEL transmembrane domain containing 7 EMBV3_16970 GAGAAATGACTTTATAGAAAGCTGACTCAGAAAGACGGAAAGTATCTTGGACCTGTTTGG Gene GeneID:534958|AGTPBP1:XM_002689815:8_cdna Constitutive 0 NULL GeneID:534958 8 GENE AGTPBP1 NULL ATP/GTP binding protein 1 EMBV3_10481 AGTTGCCTTCCCTCACTTTTCACGCTGTACTTTGGAGTGTCTTTGCAGCCCACATCAGAG Gene BVT0102_108097 + 1 EMBV3_29172 GK000018.2:49897364-49902541 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02849 CGTCTTTCCCTCAGTTATACTTTCAATGACCTTTTGTGCATCTGTAAAGGCGAAGCAGAG Gene GeneID:514813|USP7:XM_002697958:668_cdna Constitutive 3 NULL GeneID:514813 25 GENE USP7 NULL similar to ubiquitin-specific protease 7 EMBV3_35545 GCCTTCCTTAACAAATAAATGCCCCAGCCAGAAAGCACCACGTGAATGCTGTCAAGTAAG Gene GeneID:504429|MERTK:XM_002691156:197_cdna Constitutive 0 NULL GeneID:504429 11 GENE MERTK NULL c-mer proto-oncogene tyrosine kinase EMBV3_25495 ATGTCATAGCCAAGCTCACGACCATCGACAACCACCCCATGAACAGGGTGCTGGGTTTTG Gene GeneID:508365|BCL2L14:NM_001015544:80_cdna Constitutive 0 NULL GeneID:508365 5 GENE BCL2L14 NULL Bcl2-like 14 (apoptosis facilitator) EMBV3_11742 ACACGGTGACCAAAATCTGCGTGTTCCTCTTCGCCTTCGTCGTGCCCATCCTGGTCATCA Gene GeneID:781956|OPRD1:XM_002685750:511_cdna Constitutive 0 NULL GeneID:781956 2 GENE OPRD1 NULL opioid receptor, delta 1 EMBV3_24470 GCATGTAAGAGGGTGAAACAGTACACAAGCTGTCAAGCTCTGTTAACAAGCCATGGTAAG Gene BVV0101_032354 - 1 EMBV3_24706 GK000006.2:8432158-8683325 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202423 TCONS_00202419 TCONS_00202428 1 XLOC_123972 NonCoding TCONS_00202423 XLOC_123972 NonCoding NonCoding - 6:8321769-8467752 - TSS151921 1499 1 TCONS_00202423_2 70 0.348899266177452 3 0.989752161225357 0.000219898860019632 0.000198198971358084 0.000228506373630991 6.92544410909585e-05 0.000132428265840848 4.30686450868349e-122 2.23613907486663e-25 6.20856743141264e-42 0.000188056550708136 0 0 4.17187003571239e-164 7.09601896164118e-11 0 0.000166635141573429 0 0 0 0.000395275712136479 1.03251359257121e-39 8.6069118065027e-06 0 0 0 6.40777483392351e-05 1.4509412587683e-06 0.00032778588860788 0 0 0 XM_005201865.1 CLDN18 PREDICTED: Bos taurus claudin 18 (CLDN18), transcript variant X1, 4e-40 170 85.43 0.0993995997331554 0 noncoding 0 0 1 1 -0.0658927382855274 0.576353006528557 0.0206578642495912 0.692400585351426 CCTCATGGGAAGTAAGTGTGCAGTAGAGGGCCGCTCAGTGGGTGAGGGGTGCTTACTGTGCCTTAAGGGGTCGACTCAGGGGGCTTGAGGGGCTCAACCCTGCACATAGCAAAGAAAGGACTGGCCCTTGCCTGGCTTCTGGGCAGCGACACCCTCTGAGCCCTTGGAATATCCCACCTGATAAGAATGCTCCTGAGACCCTGGGCCACAGCACATAATTTCTGGTAACAACGTGGTTTACAGTGAACACCTGCTTTTATTCTCCCGCACCTGAACTGCACCATCAGTTTGGCCTCCGTGGGGGCTGGAGGCTGCATCGCTCAGGTCAGTTCGTGCGTGCTCCTGGCCTTGGTGACTGATTCCCAAGCAAGACCATGGATATTCAGTATTTTTAGGTATCTTTGGGCTTTCTTGGTGGCTCAACTGGGAAGAAGACTGCAATGAAGAAACACAGGAGACATGAGTTGGATCCCTGGGTTGGGAAGATTTCATGGAGGAAGAAATGGGAACCCACTCCAATATTCTTGCCTGGAGAATCCCATGAACAGAGGAGACTGGCAAGCTACAGTCCATGGGATTGCAAAGAGTTGGATGTAACTGAGCAGGAGCAAGTCTTCCTAATTAAATCCATCCTGCTTGGCCCTCCCACGTGATTGGACTTCTGCTCAGCACCCCGAGGGATGGATTACCTGATTTACATCCTGGCATCATGTGACTGCAGAGGACCACAGTGGCAGAGAGGCATCTCTCACCATTTATAACCACGCTCCCTTGGCATTTCTCTTGATTCCTTTAGGAGTAAACCAATATTTTGTGAATATAATGTTGTATGCAAACTTGGGAAGATTCCCACCCCCCGACCCGCCGTACATAACATCATCAGCTGTATTTAGTGAATTCCGGTGACCTTAGACAGTATATTTTTTCCCCTCTGCACCCATCAAAAATAGAAAGATTCCAAGAAAATGTATCCATAAGGGGAAGTTTGACTGTAACTAAACAGACAGATGTTTAAGAACATGCTTTTCTTAATCAAATATGGTCTGTGATGCACAGAGTATCAGAGGGCTTGAAAAAAGCCAAAACTACAGAAGCCTCCAAAACTAAAGAAGCCTCATGGAGCTGAGATATAAGCTTACCATGGCTTGTTAACAGAGCTTGACAGCTTGTGTACTGTTTCACCCTCTTACATGCCTAATAAAGTAATAAAAATGTATGCGGGATAAATAAAAAAGGTTCTGATTCGTGAGGCATAAAATCTCTGCTGTGAACTGGAATAGTTTTTTGAGTTACAGTTACATTTTTATTTGTAATTTTAAAAGTGCAGCCAACAGTTTGTAGAGCGCTAATGTACACACATGTGTTTTATTTGAATGTGTTCATTTACCTTTCACCATATATGCATGCACTTTTTATCAAGGATAAGATTTTGTTTTTAAATCGATTTTTCAGTAAAATGACTATTCTATTAATCTGTCTTTAAACACACTGTCTCTCTC TCONS_00204400 TCONS_00204401 r 5' 70032 TCONS_00204400 TCONS_00204401 r 5' 70032 EMBV3_03587 CACAGCTGAAGACCTGGTATATAGAGGAAATCCAAGGGGTGGTGCTAGAAGACAGATGCC Gene GeneID:532712|CDC42:NM_001046332:212_cdna Constitutive 0 NULL GeneID:532712 2 GENE CDC42 MGC128612 cell division cycle 42 (GTP binding protein, 25kDa) EMBV3_17005 CTGATGTCCAGGCCGTGTGCTCCCAGAAAAATGTTGCCTGCAAGAATGGGCAGACCAATT Gene GeneID:282340|RNASE1:NM_001014386:19_cdna Constitutive 0 NULL GeneID:282340 10 GENE RNASE1 RNS1 ribonuclease EMBV3_37219 CAACACAACTGCACGAGACATGCCCCCAACGACAAAACAGCGGCGACGTGAGACCCACAT Gene BVV0102_153898 + 0 NULL GK000027.2:28735-99495 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10318 TAACGGGAAACTGGCGTCCTGGGCCTCCATCCTGGGCTTCGTGGTGATGATGTCATTAGA Gene GeneID:615681|SLC39A11:NM_001076390:35_cdna Constitutive 0 NULL GeneID:615681 19 GENE SLC39A11 NULL solute carrier family 39 (metal ion transporter), member 11 EMBV3_33365 ACGTTTTCTGGGAAGAGCTAGAGCAGGTCAGAGTAGGCCTGATGGGTAACTCAGGTAAAG Gene BVT0102_071878 + 0 NULL GK000023.2:31216031-31235373 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133151 TCONS_00133147 TCONS_00133149 TCONS_00133152 TCONS_00133150 1 XLOC_081032 Coding TCONS_00133147 XLOC_081032 Coding Coding ZNF322A 23:31206263-31219153 = TSS99501 4778 1 TCONS_00133147_4 402 0.0194642109669318 3 0.629529055784002 1.07899963724257e-11 2.53587298177284e-12 5.88002885153764e-12 1.60968681504078e-12 2.01144444338808e-12 8.59958789523778e-13 1.80752885353238e-05 3.41681555544099e-09 1.06646652617448e-11 8.87083759788704e-10 5.4399162074314e-15 4.36927560658819e-05 3.75317441584875e-10 1.03844853123826e-09 4.86080135675763e-05 0.00522032666977591 1.20161407834481e-08 0.000664739836647316 4.25667781441048e-09 2.56846002520796e-05 1.17322871177302e-12 0.000154604940942813 0.00132833050335473 0.00298895640391849 4.32724028400873e-12 2.21088516182377e-06 7.73121555783721e-13 6.30483679580122e-12 9.69923475840974e-05 3.18789700382436e-11 XM_005223787.1 ZNF322A PREDICTED: Bos taurus zinc finger protein 322 (ZNF322A), transcript 0.0 8193 100.00 0.950606948514023 NM_001242798.1 ZNF322 Homo sapiens zinc finger protein 322 (ZNF322), transcript variant 0.0 4213 81.23 0.937840100460444 TCONS_00133147_4 sp|Q6U7Q0|ZN322_HUMAN ZN322_HUMAN Zinc finger protein 322; 0.0 789 93.78 0.997512437810945 5 coding 0 0 0 0 0.128158271058599 0.537399058996466 0.053709832886436 0.38864259135061 CGCTTCCCAGCCAGGCTGAAAAGGCTCGGGAAGCTAGCTGGCCTTGTTGGCCCTTAAATCGCACACTGGATGGCCTGGCCCCAGCTACCCTCGCCGAGCCGCGCAAAGAAGGATGCTCCTGGCTCTCGTCGGCCTCCCAGGAGAGGCAAGAATTGAGTATTGTTAATAACTGTGGACTGGAGACCTTTTGGAGCCAAAAGGAAGACAGTCTTGAGTCTTTCTTGTTACGGGTTGTAAAGACCACATAAGGAACGAGTGCATGTGATGCTGGAAACTTGTAAAGAGGAACTGCTCATGACTGAAAGGCCTAAGACAGATGTATCTTTCAAGTTCTTATCGAGAAAATGACTGTGAAGAAAATGATGGGTCAGGAAGACCAGTGGAAAACTCCCTAGGAGAGAGCCATAGAAAATGTACACTTCAGAAGAGAGATATAATCAGAGAACTCAAAAAAGGAAAATATATCATGTATGCCCTCAGAAGGGTAAAAAGATTTTTATTCATGTGCATGAGATTACTCAAATAGATGATCAGATATACGAGTGCCTTGAACGTGAGCAAAACTTTTGTGAAAACTTAGCTCTTATTATGTGTGAGAGAACCCACACTGGGGAGAAACCTTATAGATGTGATATGTGTGAGAAAACCTTTATCCAAAGCTCAGATCTTATTTCACATCAGAGGATCCACAGTTATGAGAAACCTTATAAATGTAGCAAATGTGAGAAGAGCTTTTGGCACCACTTAGCCCTTTCAGGACACCAGAGAACGCATGCAGGTAAAAAATTCTATACATGTGATATCTGTGGCAAGAATTTTGGTCAGAGCTCTGATCTGCTTGTCCACCAGCGAAGCCATACAGGCGAGAAACCTTATCTGTGTAGTGAGTGTGATAAATGCTTCAGCCGAAGTACAAACCTCATAAGGCATCGAAGAACTCACACGGGTGAGAAACCGTTTAAGTGTCTGGAGTGTGAAAAAGCTTTTAGTGGGAAATCCGATCTTATTAGCCACCAGAGAACTCACACTGGTGAAAGACCCTACAAATGTAATAAGTGTGAGAAAAGTTACCGACACCGGTCAGCCTTCATTGTTCATAAAAGAGTACATACTGGGGAGAAGCCCTATAAGTGTGGTGCCTGTGAGAAATGCTTTGGCCAGAAATCAGACCTTATTGTACACCAGAGAGTCCACACAGGTGAGAAGCCGTATAAATGCTTGGAATGTATGAGAAGTTTTACCCGGAGTGCCAACCTCATCAGGCACCAGGCAACTCACACTCACACTTTTAAATGCCTTGAATATGAGAAGAGCTTCAGCTGTAGTTCAGACCTTATTGTGCATCAAAGAATTCACATGGAAGAGAAACCACATCAGTGGTCTGCATGTGACAGTGGCTTCCTCCTAGGCATGGACTTCGTTGCCCAACAGAAAATGAGAACTCAGACAGAGGAGTTGCATTATAAGTACAGTGTCTGTGATAAAAGCTTTCATCAGAGCTCAGCCCTTCTTCAACATCAGACAATCCACTTTGGTGAAAAACCATATATCTGTAATGTGGCTGAGAAAGGTCTTGAGCTCAGCCCTCCCAATGTATCAGAAGCCTCACAGATGTCTTGACCAGACAAGAAGTTGTTATACCATTAAAAAAAAAAGATGTATTTACAATGTAAGAGAACTCATTTAAGATGGAGAACTCAAACTCAGACTTTCCTCAGAGCTCAGACTTTATTGGGGACCAGAAAATCTGCAGTTGTAGGAACTTGAGAAATGGTTTGACCAGAGAGCTGTCTTTATAGAACCGTATCAATCACTCCAGTGAGAAACCTTACAAATGCCCTGAGTTTTTGGAAAACCTCAGTCCAAGCTCATGTCTGATCACCCACAAGAGGATTTATACAGGTGGGAAACTTACAAGTTCAGTGAATGTGAGAAAGCTATCTAGCAATGCTCACCTCTCCTCGTTCCAAGAGAATTCAGATCAGAGGATGATATTTTTTTAATGCCCTGTGAAACAGTGCTTCAGACAGTATGCACGCCTCATTGGACATCAGAAAGCCCCACTGGAAAGAAACCCCAACAGTTGTGAAAAAAGCCTCTTAACATAACTGTGACTTTGTTACCTATCAGAGAAGCCATACAGGTGAAAATTTGTGTATTTGCCTTGAATGTGGCAAAAGCATTAAGTGGAGAGCTTTCTTGGGTTTGCAACCCACGCCACCCCCCCCACCACCACCCCCCCCACCCCCCCGCCAAAAAAAAAATCTGATGAAGGACCTTATGAATTCTCAGAATGAGAAAAACTTCTGTCAATGATCAGTTCTTGTACACCAGGGAACTTGTATAAGTGAAAGACCCTATAAATAACCCTAAGTCTAGGGGGAAAAAAATCCTTGCAGGAAATCTCTACCTTATTGGGCCCCAAAGAAACTACTCTGGAGAGCATTTTGTAGACCTCTAAAGAGGTCTAACTCGATTGTGTACATTTAATAGGTATGAGAAGAACTGTTCTCATAGTTAGTTGACCCCTGTAGTAGAGATGACTTTTAATGGAGTCGACATGCAAACCGTTTTGTTTAGATTCCCAGAAACGTTTTCTGGGAAGAGCTAGAGCAGGTCAGAGTAGGCCTGATGGGTAACTCAGGTAAAGATGCTTTTCTTTTATCTGAACCACTGAATGATTGCTTTACTTTCAGTTTTTAAAATTTGGAACTCCAATAAAAGGAAGGACTGTAATTGAGATAGAAAGTGTGGCATGTGTTACTGTTGGGGAAAGAAGTACATTGACTTTGCCTCTGTTGATTTTCTAATTCTCGGGTAGAACGGGGACTAGTGTGTTGATACCAGCATGGGAACCTTCTGCTGGTTGTGAAAAGAACTAAACAACTGGGGAGTAGTTATCCTAGATCAAAACACTCCCCAGAATTTCCGCTTTGGAGGACCAACCTCATAATAAGGCAGAATGTTCAACATTTTACTTGGTGTGAATTGAGGCATACCTTCAGTCCTTGCCCTAAAATATCTTTTGGACTATTACTTGTATTTGCAATTTCAGCTTTAGAGATTTGTTTGTTATCAACAGAGAAGTGCAAATTCCAGGATGATCATTATGATTTTGCTAGTTGCCATATTTTTGTGACTTCATTTATCATGTTTCTTTCAATGGTAAGATATACTCAATCAACTCCTTGCAAAGTGTTTAAGGGAAGGCTGACAGACTCAAGTCTGAGTCAGCACAGAGTAAAACACATACTGATGCGTTATTAATGGAGAAACGACTAATTTTAAGAATCCTGACTAAAAAGCTGGTAATGTTTCTTTTTCCCCCCACTCCATCATCCTGTTTATAGCAAATCCAAGCCTCATAATGATATACCTTTCATTTATTTTGGTTCTGCCAAGGAAAGAGAATACTTTTTTATTTCTGGGGAAAAGACAAGTCACCACAATATAAGGTGTACATTTGGCTTGTAAAATAGGATTCTAAATGCTAGAAGGGAAAAGGAGTTGGCATTCATCAGAGGTTTCAGGATAGGCACTTATCTCCAATTTAGTATAATTATGATTACCTTTAACATTCTCTGGAAACACTAATTAATTCAGGGATCTATAAATGCATGCTTGTGAGGTTTTTTTCCCCCCTTCCCTCAGATTAAAAGACATTTAATATAAATACTTAGGAGTCCTACAGTCTTTGGTACTGTAGACTGGTGAATAAATATTTGCGGTCCTCTGATACATCTTAGCAGATCCTGAACTCTAGAAGCATTGGTGTTTGGACTCATGGGGGTGGCCAGCTGCTAGACTGCCACCTTGCGTATGGCTCCAAGCTTTGATCCTAATGACAGGTTGGTGACCTTGATAATCTTAGGGTCAGAGGATATAACATAGTGATAAGGAATTTGATTCTAGGCTGTTTTTTCTTTCTTTTAGAAAACAGATCCTGGAAGTTTATTTGATCTGATGTGTTTTAGTAATTTTCATTAGCTCTTACACCATAAAAACTTGCTCTGTGTGATAAAACACACAAGATATATTTGTTTCTTTTTGATGAAAATCATGCCTGTCACTAGTATATATTTGACAGTTGTAATTTTTAAAATAGTATTGGATGTATGGCTTGGTGGTGATGAAAATTAGTCCTTATGGCTACTTGTTAGTCATTAGAACTTGGAGAAGGGCACAGTTGTTAACTTTGGTGGGGCAATGACCTGCCCCTTTCAACTAATCTTACTGGTAATTGTCTCTAGTCTTTAAGTAAATTAAGGATGGACCATCCCTCAACCAAAACTTTGAGGGTATGAAATAGGTCTGAGGGCTTTTAACCATGGGGGAAAAAAGGGTGTTGGTATTACTCATATAGAATAACCTGAGGTTGGAGAGGACCACTTAGGAGCCTGTAACCAAAACTAGAAGGTAACTTCTGGAATGGAGGGAGGTTCTCTTGAGACAGTGCCAACCTAAATCTACCTCAGGTAAGTAGTTAGAGGAACTTTTATCAAGATTTCAGACCAAACAAGACACTTGTATTCAGTCAGTGTATTCCTATGCTTTCATGTTTTTGTTTTCCCTTAATTCTTAAATAAAAACATTGTTCTGAAAACTCCATCTTTGCCTCCACTGTACTCAGAAAAAGCGTTTCCCTTTCATTTGTGTTACAATAAAGCAGATGTTCAAGAATCCTTACAGTGTGTACATATATTAAGCCATCATCATGTATACTTTAAATACCTTATATTTTATTTGTCAGTTACATTTCAATAAAGCTAGGGGAAAAG EMBV3_04089 TCTGCTACAGATGGTGAGCAGTGCTGTGTAGAAGGAAGACACTTACCTAGGGGTCAGGAA Gene BVT0102_149418 + 0 NULL GK000019.2:53246068-53318968 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100791 1 XLOC_061033 NonCoding TCONS_00100791 XLOC_061033 NonCoding NonCoding - 19:53249546-53250671 - TSS75167 1125 1 TCONS_00100791_2 85 0.151111111111111 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000821693280234216 1.47575832401814e-05 0.000780605834527674 0 0 0 0 0 0 0 0 0 0 9.92497908443243e-05 0 XM_005221202.1 TBC1D16 PREDICTED: Bos taurus TBC1 domain family, member 16 (TBC1D16), 0.0 2030 100.00 0.999111111111111 NM_019020.3 TBC1D16 Homo sapiens TBC1 domain family, member 16 (TBC1D16), transcript 3e-78 297 68.59 0.839111111111111 0 noncoding 0 0 0 0 0.0163769725086401 0.900601086488066 0.0433932819723981 0.429179460899267 CCTTGGATTTCTAAGCTGGGCTGCAAGGCCTTCCCTTTGAGTGAAAGCATTCTGTCCCCGGCCATCCCTGGCTCAGAAGAGGGACCTGCCACCACAGTTGTGAAGCCTAAGGACAGGGCTCTGCTACAGATGGTGAGCAGTGCTGTGTAGAAGGAAGACACTTACCTAGGGGTCAGGAACCTGGTTCCCGTCCTGCCTCTGACCCTTTCCAGGTGCGTGACCTCCCCACTCTGAGCCTCGGTTCCCTCATCTGTAGAATGGGAACACTGCCTCTGGCTTAGCCCACCTCACAGGACTAGTGTGGGGACTCTCCAGGTGAAGGTGTCATGAAGATGGTTTCCCAGTCCTGGGGACCTCACCTGCCACTCAGGGAAGAGACCACTGACCTTGGCCTTGCAGCCTTGGCTGAGAGGTGGCGTGCTCCCAATCTGAGAGCTCACCCTGCTTCAGGAGTCAGCAAACCCCCTCCCTTCCACACGTCCGCCTGACTGTGCGTCCCCAGCTAGGGGGACTCCTCTGTGCCTCTTCTGTGTAATTCACCCCATGCCACCTCACTCCTGCCACAGGGAAGACTCACCATGAGCCATGACCTTGGTGACCCCGAGAGACGTGTCTGTGTGCAGCATGCCTGGCTCTGAATCAGGACGTGGTCCAGGCCTCAGGGTCCTCCCCTGGGGCTGTGAAACCCACTCGAGCCTGGGAGCAGGGAGGGGGCTGTGGCCCCCTGAGTCAGGCTGTAGAGACTGGAGAGGGATGTCCCTGGGCCTCTGGGGGGCAGGGCGGGTGTGCAGACAGGCTGCAGGCATCTGGCCGTTAAACACGTTGCGCTCAATTTCTAGGTAGGAAAGTACGTTTCCAGTTGAGAGATCAAGTCACTTGGTCATCTTCTCTGTAGCACCTTGGGTTAGTCAGAGGGCAGGGTTTCCGTTGTCTTAGGGAAAGTTTAAAGAAATTTCCACCATTACCAGGAGATCACTGATGTCTGTGGCAAGCAATTCGTTCTCTGTATTTTATTTTGTTTTTTAAATATGATCGCCTGTTGCCCCAGGCTCAGGACTGGCCACTTTGACCACTGGGGCCCCAGCCCCTACAGTGCTTCCGGCTCTCGTGGATCCCACTGCAAAG TCONS_00094481 . 3' 2601 TCONS_00094481 . 3' 3725 EMBV3_10834 ACCAACATCTCTGTCCCTAATGCAGCCCAGGATCAAGACTCAGTGCCCACGCCGACATCT Gene GeneID:100126045|ENTPD2:NM_001105648:8_cdna Constitutive 0 NULL GeneID:100126045 11 GENE ENTPD2 MGC151796 ectonucleoside triphosphate diphosphohydrolase 2 EMBV3_15376 ACGTGTGGGACGCTGGACTACTTGCCCCCAGAAATGATCGAGGGGAGAACATATGATGAA Gene GeneID:618599|AURKC:XM_002695441:79_cdna Constitutive 0 NULL GeneID:618599 18 GENE AURKC NULL aurora kinase C EMBV3_06141 TTACTGGGGGGCTTGAGACTGACCCCATGGTCCCTTACTTTCCCAAGGTGGGCTTACAAA Gene GeneID:280765|DES:NM_001081575:11_cdna Constitutive 0 NULL GeneID:280765 2 GENE DES NULL desmin EMBV3_07302 CAAACCCAAATCCTTCAGGGCAGCCTCAGGAGCAAACCCCCAGTGGATGACTCACATATA Gene BVV0102_350359 + 1 EMBV3_21674 GK000006.2:26802350-26850887 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02436 TGGACCCTCCAACGGTCTTCTTGTCGTTCGCCGACAGGCTTTTGAGAGCGTTTAAGCACT Gene BVT0102_433964 - 1 EMBV3_04092 GK000010.2:72299440-72413701 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10477 AGTCAGTGCGACTACGGAATGTTTTCTGCTGGCGATGATGTCGTATGATCGTTATCTAGC Gene GeneID:783884|LOC783884:XM_002684675:32_cdna Constitutive 0 NULL GeneID:783884 1 GENE LOC783884 NULL similar to olfactory receptor MOR183-1 EMBV3_23331 CCCATCCGATCACATTCCTGTATCTACCCAGATTGCTCATTTCCCACCTTTGCCCGGGTA Gene BVV0102_295134 + 0 NULL GK000016.2:71153634-71413973 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42293 CTAACCTGTGTGGTGCCCACCACACTGCAGATGAGTTAAAAAACAAAACTGTGTGTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21908 CCTCTAAGCATGAGTGAGTAGGTGGGAGGTTGTTTCAATGTAAGCCCTGCAGCTTGTGAG Gene GeneID:767907|REG4:NM_001076986:77_cdna Constitutive 0 NULL GeneID:767907 3 GENE REG4 MGC127540 regenerating islet-derived family, member 4 EMBV3_04540 AGCCCGCGACGTTGTGTGTTCTCTTCCCGACACTTGCCAGGGTCGCGCTCCCAGAAACAA Gene GeneID:100301102|LOC100301102:XM_002698766:27_cdna Constitutive 0 NULL GeneID:100301102 28 GENE LOC100301102 NULL hypothetical protein LOC100301102 EMBV3_41483 CACTTTTCAGCTGCTAGTATCAGAACCACACGAAGCTATATCCTCCAAAGCCTGTGGTAT Gene GeneID:506237|ZC3H6:XM_002707712:191_cdna Constitutive 0 NULL GeneID:506237 11 GENE ZC3H6 NULL zinc finger CCCH-type containing 6 EMBV3_39989 CCCAGCTCGGGAGCACAGTGTTGTGTATGTGGTTCTTTGTCGTACTTTGTACTATTTTGC Gene GeneID:508022|CDCA8:NM_001083652:101_cdna Constitutive 1 NULL GeneID:508022 3 GENE CDCA8 MGC151855 cell division cycle associated 8 EMBV3_24108 GCCACAGGATTCAGAGACCCCAGTACAGAAGCACACATCAAAGCAATGAAGATTTTGGTG Gene GeneID:664636|TAS2R10:NM_001046626:122_cdna Constitutive 0 NULL GeneID:664636 5 GENE TAS2R10 BOTA-T2R10A taste receptor, type 2, member 10 EMBV3_13526 GAAGCAGAAGGAAGGTATCTGATTAATGTGTAGTAGAAAAATTTTATGTAGTTCTATGTA Gene GeneID:785690|GEN1:XM_002691474:348_cdna Constitutive 0 NULL GeneID:785690 11 GENE GEN1 NULL Gen homolog 1, endonuclease (Drosophila) EMBV3_12245 CCGCCACCTCTTCCATCCGGACTTGCTCCAGTGCAGCCGGGAACTTCCTGTGCCCGGCCA Variant GeneID:768256|DECR2:NM_001078122:330_cdna 196^452 3 EMBV3_38399 GeneID:768256 25 GENE DECR2 MGC128381 2,4-dienoyl CoA reductase 2, peroxisomal EMBV3_34872 GGAAAAGACTGGAGAACTGAAACTGCTGGTGGGGCGCGTCTCCACGCTACTGGAGTGCGG Variant GeneID:534297|METRNL:XM_002696106:183_cdna 486^848 5 EMBV3_04459 GeneID:534297 19 GENE METRNL NULL meteorin, glial cell differentiation regulator-like EMBV3_05444 GCCAGGGAGGGCAAATGTGCTTCTCCTTGTCCCACTCCTTTAGCTGCTACTGCCTCCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37533 TCTCAGTTCAGGGGAAGCCCCAGGCTCTCAGAAAGTAAGCAGAGAGAAGAAAGCAAGGGA Gene GeneID:282069|SFRP5:NM_174461:48_cdna Constitutive 0 NULL GeneID:282069 26 GENE SFRP5 NULL secreted frizzled-related protein 5 EMBV3_28799 AGCATCCTCAGCGGTATCCTGCTCATGGCCTTCCCGGTCACCTCCATCTTCCACACCTTC Gene GeneID:506324|KCNG2:XM_002697661:79_cdna Constitutive 0 NULL GeneID:506324 24 GENE KCNG2 NULL potassium voltage-gated channel, subfamily G, member 2 EMBV3_20678 CAGCTTTGGACAATAACTGCTTTTAGAAACTGTAAAGTAGTTACAAGAGAACAGTTGCCC Gene GeneID:783114|LOC783114:XM_002683684:2_cdna Constitutive 1 NULL GeneID:783114 9 GENE LOC783114 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_10841 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12685 CTCAAGCAAAGAAGAGTTGAGCACAATCAGGTGGGAGAAAAAACAGAGGAAAGAAGAGTA Variant GeneID:510267|TMPO:NM_001098005:977_cdna 680^790 3 EMBV3_04454 GeneID:510267 5 GENE TMPO LAP2beta thymopoietin EMBV3_01524 AGGTGGTTGCACCTCGGCAGAATGTCCTCTGTGACTTCCAGTTTTGCTTAGTTTTCGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11244 GAAAGCGGAGACCTCCAAACCAGAGCCGTGTGATGCGGAACCAAAAAAGGCAAAGCAGAA Gene GeneID:616431|LOC616431:XM_002699854:30_cdna Constitutive 0 NULL GeneID:616431 X GENE LOC616431 NULL similar to H2B histone family, member W, testis-specific EMBV3_15264 CTGGTAACCTGTGCATGGTGACTGGAGGTGCTAACCTGGGAAGAATTGGTGTGATTTCAA Gene GeneID:785061|LOC785061:XM_002707873:89_cdna Constitutive 0 NULL GeneID:785061 X GENE LOC785061 NULL similar to ribosomal protein S4, X-linked X EMBV3_25952 CAGTACTGGGGAAGCCAGAAAGTTCTTAAAGGGACATTTCAAACTGTTTACAGCACATCC Gene GeneID:516536|C1H21ORF63:XM_002684582:87_cdna Constitutive 3 NULL GeneID:516536 1 GENE C1H21ORF63 MGC155009 chromosome 21 open reading frame 63 ortholog EMBV3_31694 TCGTAAGGCTGCTGGCTGAAAACTGTGTCTATGCAACCTTCCAAGTGCGGAGTGTCAACC Gene GeneID:280952|KDM6A:XM_002700179:2_cdna Constitutive 0 NULL GeneID:280952 X GENE KDM6A UTX lysine (K)-specific demethylase 6A EMBV3_09024 GTGACCCCACAGACACAGGGATTTCACAAAAGGAGCAGAAAAAATACAGGCTGTGAAGGC Gene GeneID:618514|VSTM1:NM_001101274:193_cdna Constitutive 0 NULL GeneID:618514 18 GENE VSTM1 NULL V-set and transmembrane domain containing 1 EMBV3_40024 CCTCAGAAGATCCAGTTATCCTGGGAATTGTGTATGACTCCGTTGCTTTCCCTGAGCAGG Gene GeneID:515770|PPOX:XM_002685851:391_cdna Constitutive 1 NULL GeneID:515770 3 GENE PPOX NULL protoporphyrinogen oxidase EMBV3_35185 TCTTCGGCTGCAGACACAAGGAGAGGGATTATTTGTTCAGAGACGAGCTCAGACACTTCC Gene GeneID:507991|MTRR:NM_001030299:8_cdna Constitutive 1 NULL GeneID:507991 20 GENE MTRR NULL 5-methyltetrahydrofolate-homocysteine methyltransferase reductase EMBV3_04940 TGGTGCATTTCCCCAGAAGTTATGTGTTTGCAGGAAGCCAAGCAGCTACAGGGACTCAGG Gene BVV0102_087428 + 0 NULL GK000021.2:33926745-33934750 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04833 GCCAAATACGTAATCGACGTGGAGGAGCCGGTCCTGCACCCCCCAAGGGTGGCCCTAAGC Variant GeneID:505456|STAP2:NM_001034246:182_cdna 762^864 3 EMBV3_12502 GeneID:505456 7 GENE STAP2 MGC127502 signal transducing adaptor family member 2 EMBV3_30551 CGAGCCTATTCAGGGTTAACTGTGTCTACTGTCCTTTTTGGCATCACAAGGTCTCTGTTG Gene GeneID:530437|LOC530437:XM_002707845:1_cdna Constitutive 0 NULL GeneID:530437 12 GENE LOC530437 NULL similar to ATP-binding cassette, sub-family C, member 4 EMBV3_13623 ACAGAGAGATGCGAAAATGGGGCCACGAGGGGGACATGGGTCCTTGAGAAAATAGGCTTT Gene GeneID:526097|TELO2:XM_002697914:542_cdna Constitutive 0 NULL GeneID:526097 25 GENE TELO2 NULL TEL2, telomere maintenance 2, homolog (S. cerevisiae) EMBV3_27933 AGTCCTGAATCTTAACTGTGAGGGCTACCTACCACCCAGCGGTTCTTACTCTCTAGCCAA Gene GeneID:613890|KCNJ16:NM_001076294:8_cdna Constitutive 0 NULL GeneID:613890 19 GENE KCNJ16 MGC139474 potassium inwardly-rectifying channel, subfamily J, member 16 EMBV3_17137 ATCACTTCTGTCCCTTACCGCTCGGTCTGCTCCCGCTTGCCTTATGCTGACTCCTGCAAA Gene GeneID:788650|LOC788650:XM_002695987:357_cdna Constitutive 0 NULL GeneID:788650 19 GENE LOC788650 NULL similar to hCG2043352 EMBV3_41493 CCTTCTCTACTTCCTGACTGAAGAGGAGGAAACACTCCCACAGTCATTCTATGTGGCCAC Gene BVV0102_150658 + 0 NULL GK000003.2:25923739-26143116 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17971 GGCAAGAGGAAACCTTCAGCATCAGTGACTCCCAAATCAGCAGCACAGAGTTTCTGCAAG Gene GeneID:510233|FAM175B:NM_001166587:27_cdna UTR3_Alt 4 NULL GeneID:510233 26 GENE FAM175B KIAA0157 BRISC complex subunit Abro1 EMBV3_40463 TGTCAGGATATATGGGGATAGCTTTCTGGTCTTGAAACGTATTTATGTTGCCTTGCTAGG Gene GeneID:509292|UBA5:NM_001101067:22_cdna UTR3_Alt 2 NULL GeneID:509292 1 GENE UBA5 NULL ubiquitin-like modifier activating enzyme 5 EMBV3_33621 AGATGGACAGGAATTTTGACAAAGCCACTTTTGAAAAGCAGATGTCTGTGATGAGGGGTC Gene GeneID:521790|PI4K2B:NM_001102064:180_cdna UTR3_Alt 2 NULL GeneID:521790 6 GENE PI4K2B MGC152558 phosphatidylinositol 4-kinase type 2 beta EMBV3_22975 GGATGGCGTGGCTTGGGGCTGCTGACCACATGGGCACACGGATACTTTATCTGAAGAGTA Gene GeneID:528057|CSGALNACT1:NM_001102116:2_cdna Constitutive 0 NULL GeneID:528057 27 GENE CSGALNACT1 CHGN MGC148954 chondroitin sulfate N-acetylgalactosaminyltransferase 1 EMBV3_36141 CTCCTCCTTTCAGAGACACAGAGAGAGTCACACCACTCAGGTTATCCACCAGCTGAGGCT Gene GeneID:617611|MYO16:XM_002692009:139_cdna Constitutive 0 NULL GeneID:617611 12 GENE MYO16 NULL myosin XVI EMBV3_24779 ACAGGAACTGTGGATTTATCAGAGAGAGTGGCAGCGCTTTGGCGTCCGCATGCTACGAGA Gene GeneID:615133|ACTR8:NM_001076361:286_cdna Constitutive 0 NULL GeneID:615133 22 GENE ACTR8 MGC139092 ARP8 actin-related protein 8 homolog (yeast) EMBV3_30832 AGTAGCCGGCCGCATGCTTAGAGGTAAAGTCCATGGTTCTCTGGCCCATGCTGGGAAAGT Gene GeneID:783726|LOC783726:XM_002687535:516_cdna Constitutive 0 NULL GeneID:783726 5 GENE LOC783726 NULL similar to ubiquitin-like/S30 ribosomal fusion protein EMBV3_12316 CAACTTTGGTCAAGTGGTGGCCGATGTGCTCTGCCCTCCCCAGTACCCCCCAGGAAAGCC Variant GeneID:506605|MAD2L2:NM_001045946:37_cdna 183^770 6 EMBV3_23984 GeneID:506605 16 GENE MAD2L2 MGC137331 MAD2 mitotic arrest deficient-like 2 (yeast) EMBV3_16176 GCACAGGGTGTGATGGTTAGATAGCTTCACCACCTCAGTGAACAGAGTTTGACCAAACTC Gene BVV0102_398883 + 0 NULL GK000009.2:88229044-88231932 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05877 CAATTGCTACCACTACGGCGTCTGCAACTTCCAATGCCTCAGGTTTCATAAAGTCCTGCT Gene GeneID:618087|LOC618087:XM_002694226:144_cdna Constitutive 0 NULL GeneID:618087 16 GENE LOC618087 NULL similar to CD46 protein EMBV3_26137 CCGAGAACATCCGGCTCCTGCTGGAAGGAGTCACGCAGCTGCTGCTGGCCCACGGCGCCG Variant GeneID:509719|ASB6:XM_002691641:348_cdna 599^724 1 EMBV3_23618 GeneID:509719 11 GENE ASB6 NULL ankyrin repeat and SOCS box-containing 6 EMBV3_32220 ACTCATCTCCTACATAGTCATTCTGAGCTCCCTGAAATCCCATGGTTCTGAAGGACGGCG Gene GeneID:531039|LOC531039:XM_002695533:18_cdna Constitutive 0 NULL GeneID:531039 19 GENE LOC531039 NULL similar to olfactory receptor 694 (predicted) EMBV3_19779 TTGGAAGAATCTCGGAGTCTGGCAGTCCAGCTGGTGATGCGGTACTGGGAGCCCGTGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17158 AGGCCTCAAAATGACTAAGCGGACTGGGAAGCCCCAAGGCTCCAGAGTAGTTAGGAAACA Gene GeneID:100336610|LOC100336610:XM_002700427:25_cdna Constitutive 0 NULL GeneID:100336610 X GENE LOC100336610 NULL hypothetical protein LOC100336610 EMBV3_02526 CCAGAACAAGGCTGCTTTCCTGAGCATGAGCGACACCAGGAAGGAGGGTACTTTCATCTA Gene GeneID:282072|SFTPD:NM_181026:227_cdna Constitutive 0 NULL GeneID:282072 28 GENE SFTPD COLEC7 SP-D surfactant protein D EMBV3_20465 TCTGCAGTTGAAGACTCCACTCTCTCCAGATACTCCCAGACATCCACATGGAAGGTGGCT Gene GeneID:785718|LSM11:XM_002707831:23_cdna Constitutive 0 NULL GeneID:785718 7 GENE LSM11 NULL LSM11, U7 small nuclear RNA associated EMBV3_34580 TCTCCTGCAGGCGCCCGCGCGCAGCTCTTTGTACGAGAAGTAACATTAGAAATACACATT Gene BVT0101_028003 + 0 NULL GK000009.2:53682101-53812489 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25765 AAGCCACCAAGTACTGGGAACTCAAAGGGTGGATGTCACCCAGTCCTCCAAGAGGATTAA Gene GeneID:519724|CAB39L:XM_002691786:399_cdna Constitutive 5 NULL GeneID:519724 12 GENE CAB39L NULL calcium binding protein 39-like EMBV3_38841 CTATGCACCAGGAGCTGAACCGCGTGGAGGGTCTACTTAAACTGTTCGTCTGACTCTCAT Gene GeneID:517063|AK3L1:NM_001077933:37_cdna Constitutive 0 NULL GeneID:517063 3 GENE AK3L1 NULL adenylate kinase 3-like 1 EMBV3_13797 GTCAGATTAGCTCTTCAGCAAACATTAATCTGCCACAGGTGGCTCAGAGAAGGGACAGCC Gene BVT0102_120584 + 1 EMBV3_25948 GK000018.2:45564334-45687883 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42129 ACCATTGGCTGGTCTGGGGTAAAAGTACAAAGCTGCCAGGAGCTGTCCACAGGATTCCAT Gene BVV0102_083679 + 0 NULL GK000027.2:6758026-6999516 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00154926 1 XLOC_094599 Coding TCONS_00154926 XLOC_094599 Coding Coding - 27:6819264-6832090 - TSS116040 713 2 TCONS_00154926_2 61 0.266479663394109 2 0.944561403508772 0.000285399978696008 0.000460199640303495 0.000272390379404008 0.000745393443339058 0.000268973396884319 0.000433970445676463 8.15556864643421e-05 2.48865596381034e-05 0.000470310456505261 0 0 0 1.75269101447736e-08 1.9324802448629e-42 2.1388974509612e-09 0 4.65701497545038e-06 0 0.00122700424073166 0.000608675407945685 0.000184714093901218 0 0 0 0.00208842133744289 0.00417491223096025 0.000179207641193034 0 0 0 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 2e-85 320 96.88 0.267882187938289 0 coding 0 0 0 0 -0.235130706977466 0.36047684270428 0.0642526552572778 0.26170275548768 GGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCACGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCCACCAGACTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCACTGTCTTCTCCGAAAGCATCACTGCTGTCTCTCGTTCTTACGAAGCAACGTGGTTGTTTTAAGAAGAAGAGAGAAACGATTCTAGCTTTAGCTGTGGGAACGTTCCTGCTTGCTGGCCTGACTCGACCATTGGCTGGTCTGGGGTAAAAGTACAAAGCTGCCAGGAGCTGTCCACAGGATTCCATGTGTATGAATATGCCATCGACACGGCAGAAGAGGAAAGCCGCGGAGTGGTACCAGCTCCCACAGCAGCATTCTCTGTGAGTTCTCCCGTGGTGAGTGCGGCAGCCAAAGGATTCCACAGCTTCATCCCACTCTTACTCTCAGACTCCACTCTGCAGCCTCGGCACTGCCCTCCGCATCACAGAAGAGAAATGGACCCTCCTTTCCTGGATCATCAACTATTTTTCCATCCTTCCTCAATACCCACTTTCATGATCATTCTCTAGAACTTATTACCAACATCTCTGTCACTCTTCATAAGCTTAACTTAGAGTCTCATTCTCTGAAAACCATATCTTATGCTTCCCATT TCONS_00154922 TCONS_00154923 s 3' 60837 TCONS_00154922 TCONS_00154923 s 3' 60837 EMBV3_27596 GCTTGGGGGTCTGGTGTGTCGGCGAGCCCTTGCAGCGGAACCTTGCCCAGATCCCGGTCA Variant GeneID:617377|ZNF408:XM_002693535:145_cdna 242^629 2 EMBV3_26222 GeneID:617377 15 GENE ZNF408 NULL zinc finger protein 408 EMBV3_32912 AAGGCTGTGGTCCACGCTTGGAGGTCCATCGGAGTCTACAGGGATTGCTTTACATGAAAC Gene BVV0102_063913 + 1 EMBV3_06441 GK000028.2:42305206-42317554 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162705 1 XLOC_099586 NonCoding TCONS_00162705 XLOC_099586 NonCoding NonCoding - 28:42314712-42315396 - TSS122037 684 1 TCONS_00162705_2 86 0.299707602339181 1 0 0 0 0 0 0 0 0 0 0 0 6.69354028442411e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00021292120641804 0 XM_005225041.1 GPR146 PREDICTED: Bos taurus G protein-coupled receptor 146 (GPR146), 2e-21 107 86.81 0.131578947368421 0 noncoding TTAGCTGGAAGACATATGGGATCTTAGCTCTCCAACCACGGATGTTACCTGAACCTCTGCATTTGGAAGGCGAAATGTGAACCTCTGGACCTCCAAGGATGTCCCAGGAGCTTCAGTCTTGACACAGGATGGAAAAGAGGTTGACTTTGGCCACTTTTTTCCCCACTGGAAGCAAGCAGGCAAACTGCAAACCCTGGCTAGGAACGCGAAAAGGAGAGCGCACAGAAAGAGAGCAGGGCAGAGTGGACACGTGCGCAGATGGCGCAGTGCAGCGCGCCTGGCGGGGTAGAGCTCCTGTCCAACAGCCCGCCCTCCTCTGTCTGCATCCTGGTGCACGAGGAGCTCCGGGGCGCAGAAAGAGGGTGGGAGGCCTGCTGTTAAGGCCATAGCTTTGCCAGGTGTGCATGCTCCCTCATGGGTGCTTGCGCTTCTACTTGGGTGTTGGTGGAGGAGGTCTGCGGCTGGCCCTGGTTGGGTCTTGGGAGAAGCTCAAGGCTGTGGTCCACGCTTGGAGGCCCATCGGAGTCTACAGGGATTGCTTTACATGAAACCAAGGGACATTCAGAAAATGTGCGTATTTAGACTTTACTGGTGGTCCAGAGATTGAGACTCTGTGCTTCTAATGCAGGGGGTATGAGTTTAATCCTTGGTTGGGGAACTAAGATACCACATGCCATGTGGTGT TCONS_00160779 . 3' 2159 TCONS_00160779 . 3' 2842 EMBV3_32083 AGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGAT Gene GeneID:100336512|LOC100336512:XM_002698281:988_cdna Constitutive 0 NULL GeneID:100336512 25 GENE LOC100336512 NULL hypothetical protein LOC100336512 EMBV3_32406 TGGAACAGAGCCAGCCCGAGTACAAGGCTCTCTTCAAGGAGATCTTCTCCAGGATCCAGA Gene GeneID:613582|CDR2L:XM_002696183:175_cdna Constitutive 0 NULL GeneID:613582 19 GENE CDR2L NULL cerebellar degeneration-related protein 2-like EMBV3_26447 TGGATGAAAATGCCAACCTGGATGCCAGCTGCTTCCTCAATAGCGGCCTTGAAGGCTTGG Gene GeneID:515406|CSRNP1:NM_001098035:116_cdna Constitutive 0 NULL GeneID:515406 22 GENE CSRNP1 AXUD1 cysteine-serine-rich nuclear protein 1 EMBV3_00389 GGCTCCCCCCAACTCTGCCCACTTCTTTTTGAGTATCAGCATTAGCTTACTGATTGTTCC Gene BVV0101_062825 - 0 NULL GK000006.2:26916218-26925347 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41429 GTGGATGACCCCAAGCTGGCTAACTCTGAGGGTACGTCAGAGGCCTGGGTTGACCAGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16902 CACGGCCAGTGCCCCGCTGTAATTATGGTGGAAATGTTTCTTAAATGAGCCCAGTTTGCT Gene BVV0102_214035 + 0 NULL GK000025.2:38338942-38342492 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16135 TCATGATGCTCTTAGCACCGATAATTCATGCTTTCAGCCGTGCCCCCATTCCGATGGCTG Variant GeneID:282651|LPHN3:NM_181033:1_cdna 219^422 1 EMBV3_33137 GeneID:282651 6 GENE LPHN3 LEC3 LPHH3 latrophilin 3 EMBV3_34826 GAGCTGCACTTTAAGGAGCGTGTCTTGGCGAACCCTAGCAGTCACTGTGTAATGGACTTT Gene BVT0102_344461 + 0 NULL GK000009.2:24132074-24230294 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234925 TCONS_00234924 1 XLOC_144126 Coding TCONS_00234924 XLOC_144126 Coding Coding ECHDC1 9:24219715-24258142 j TSS176247 855 1 TCONS_00234924_2 180 6 0.977905584760319 1.61867690428036e-53 2.01101469286722e-48 3.48588498605074e-34 0.000166087127714795 1.98578203891202e-05 4.5458955537169e-56 0.000255997010454469 0.000293494872912403 4.2756016291271e-50 1.57934810129719e-42 0.00155172719469816 2.144810036587e-05 3.42483630526845e-37 5.92626271804814e-65 1.37400300107924e-12 0.0121719301236693 0.00697208755882471 0.0090104693398366 1.01556196743277e-251 0 2.25455498743265e-176 0.00544678529686591 0.00463202745161353 0.00322416434985906 3.46630026923755e-26 2.97828712065031e-45 0.00155630102651717 0.000285703591991131 0.00368100327818633 0.0013128084212178 XM_005210692.1 ECHDC1 PREDICTED: Bos taurus enoyl CoA hydratase domain containing 1 (ECHDC1), transcript variant X1, mRNA. 0.0 1454 99.88 0.945029239766082 XM_005267047.1 ECHDC1 PREDICTED: Homo sapiens enoyl CoA hydratase domain containing 1 (ECHDC1), transcript variant X1, mRNA. 0.0 711 91.29 0.585964912280702 TCONS_00234924_2 sp|Q2HJD5|ECHD1_BOVIN ECHD1_BOVIN Ethylmalonyl-CoA decarboxylase; 1e-118 343 97.67 0.95 1 coding 0 0 0 0 -0.0126942205513592 0.913870829358155 0.016653237133499 0.768310473887772 AAGAGGGGCACGTCGGGGCGGAAGAAGGGCGCAACGGGGCGGAAGAGGGGCGCAGAAGAGGGGGAAGGGGATGTCGTCGCCAGTGCTGTCTTCAGGTCCCTGTGGCTGCGGGAGCTGCACTTTAAGGAGCGTGTCTTGGCGAACCCTAGCAGTCACTGTGTAATGGACTTTAGCGCTTCTTCACTAGAATTCCAGACGACGACCCGCGGGGCTTCGGCGGCGCTGTCCGTATGAGGCCATGCGCAGGCCCACTGCCCTGTGCGGGGCGCAGGTATCCTGTGCAGAGCGACGCAGAGCCCTTTGAGGGAAGGTGATGGGAAAAGAAATGGCAAGTCTTTTGAAGACATCGCCTAACGCTGTAAAGAAAAGATTGCTGCATCAGATAGGATTGTCACTTTATAATACTTCTCATGGCTTCCATGAAGAAGAAGTGAAAAAAAAACTTGAACAGTTTCCTGGTGGATCCATTGACCTTCAGAAGGAAAACAGTGGCATTGGCATTCTTACTCTGAACAATCCAAGCAAAATGAACGCCTTCTCAGGTGTTATGATGCTACAACTTCTGGAAAAAGTGATTGAATTGGAAAATTGGACAGAGGGGAAAGGCCTCATCATCCGTGGGGCAAAAAATACTTTTTCCTCAGGATCTGATCTGAATGCTGTGAAAGCACTAGGAACTCCAGAGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACACGATTTATGAGACTTCCTTTAATAAGTGTTGCACTGGTTCAAGGTCGGGCATTGGGTGGAGGAGCAGAAGTTACTACAGCATGTGATTTCAGATTCTTTACCTTTGAGCCACTGCCACCTGGGGAAGT EMBV3_26494 GTGGAAGCTGGGATTCTTCACTTTTATTTTTCGTAAACATCCATCTCGTGGTGAAATGAC Gene GeneID:536944|CLEC1A:NM_001076081:46_cdna Constitutive 2 NULL GeneID:536944 5 GENE CLEC1A NULL C-type lectin domain family 1, member A EMBV3_34821 CGGCCGGGAGTTGGGCAGAGGGAAATTTGCAGTGGTGAGGAAATGCATAAAGAAAGATTC Gene GeneID:100337400|LOC100337400:XM_002686893:110_cdna Constitutive 0 NULL GeneID:100337400 4 GENE LOC100337400 NULL serine/threonine kinase 17a-like EMBV3_18901 GAAATCCTCAAAGCTGCCGTTGGAATATGGGTGTCTGTATTCCGTTCTGGTGCCGTGTAG Gene GeneID:286836|DEFB4:NM_174775:13_cdna Constitutive 0 NULL GeneID:286836 27 GENE DEFB4 BNBD-4 BNBD4 DEFB4 defensin, beta 4 EMBV3_01702 CTCTGTGCCCAGGGATCACTTTGACTGCATCTGACCAAATCTGAATCTGGCGTCTATACC Gene GeneID:783721|LOC783721:XM_002685972:283_cdna Constitutive 0 NULL GeneID:783721 3 GENE LOC783721 NULL hypothetical LOC783721 EMBV3_12111 GCTGCCATGTCTGCCCAGGAATACTACGTTGATTACAAACCGAACCACATTGAGGGAGCC Gene GeneID:100336977|LOC100336977:XM_002691370:233_cdna Constitutive 0 NULL GeneID:100336977 11 GENE LOC100336977 NULL leucine-rich repeat transmembrane neuronal protein 1-like EMBV3_12360 TCTGCGGTAGCCTCACCTCAGCGCATTCAGATCGTGACCGACCAGCAGACGGGGCAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40341 TCTCCTTCCTGGTGGGTCTGACTTGGCGTGATTAAGAACAGGTGTGAGTCTGGCTCTGAA Gene GeneID:535099|MTMR3:NM_001081605:74_cdna Constitutive 3 NULL GeneID:535099 17 GENE MTMR3 MGC143436 myotubularin related protein 3 EMBV3_17050 GCCCTATCAGAACCAAGGGTGGGTGTTCAACATAAGTCAGGCATGAAGGAACAGTCTAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42071 CTCTATCTGTGACCTGAATCCACTGCCTCCCACTTGGTTCTTTCCACTCAGTCAGCCTCA Gene GeneID:404546|HSD11B1L:NM_206969:21_cdna Constitutive 2 NULL GeneID:404546 7 GENE HSD11B1L 11-beta-HSD3 MGC157172 hydroxysteroid (11-beta) dehydrogenase 1-like EMBV3_21482 CTGAAATGCACACGCTTCAGCATCAGTCTGAAGGTGCTTCCTGGAGGGGCCTGCCCCACT Variant GeneID:534006|FAM53C:NM_001046366:19_cdna 273^330 1 EMBV3_19868 GeneID:534006 7 GENE FAM53C MGC137468 family with sequence similarity 53, member C EMBV3_06212 TCACCCCGAGGTCAGTTATTTGGGAGAAAAGCTGAGGTAGGAACTCAGGCACGTTGAAAC Gene BVT0102_219986 + 0 NULL GK000016.2:45241138-45252586 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04383 CTTCTAGGAAGCATATCAACATCACCCACCACAGATGAGCCGAGGCTGCAGTGTCACAGA Gene BVT0102_265254 + 1 EMBV3_27644 GK000004.2:104356480-104369614 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31159 TGGTACGTCCAGCATCTCAACAAAGCTCCTCAACTCCTCCTGAAGGGCTTAACAGCAGAC Gene GeneID:100300850|LOC100300850:XM_002690591:5_cdna Constitutive 0 NULL GeneID:100300850 10 GENE LOC100300850 NULL hypothetical protein LOC100300850 EMBV3_05915 CCACATCATGAAGTCGGCGGATGTGGAGAAGTTAGCTGATGAATTGCATATGCCGTCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02373 ATTGTTACTGCCAACAGTGGCTTCATGAGCATGGGCACCTTCTTCCTGCTGATCCTTTCC Gene GeneID:100300401|LOC100300401:XM_002690704:344_cdna Constitutive 0 NULL GeneID:100300401 10 GENE LOC100300401 NULL similar to odorant receptor MOR83 EMBV3_38167 CTGTGTTCCGTGCTGCTCAGTATAGTTCAGGGGGCCCCTGCCAGCTGGTGGAACCACTTG Variant GeneID:533107|FADS1:XM_002699285:216_cdna 620^721 1 EMBV3_12663 GeneID:533107 29 GENE FADS1 NULL fatty acid desaturase 1 EMBV3_24820 CTTTCTGGCCGAGGAGCAGGCTTTCCATAGCGCTATTACCATGGGGGAACCCGATAAGAT Gene BVT0102_053259 + 0 NULL GK000030.2:110395521-110448037 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247956 TCONS_00247957 1 XLOC_151466 Coding TCONS_00247956 XLOC_151466 Coding Coding LOC100848761 X:110396144-110446196 j TSS185553 2019 2 TCONS_00247956_1 338 14 0.959940860322471 0.000511668104218381 0.000511388745765832 0.000387211462767373 0.00011778562685147 0.000105419323448517 9.63403545954737e-05 0.000171350060282998 8.33512393884298e-05 0.000275152556930441 4.13332299535999e-44 5.08629665170213e-31 3.04306875066377e-05 5.42711003666526e-10 7.96307221528634e-27 1.23269016267947e-05 8.15048809442933e-05 0 7.7090223014308e-12 0.000269571454648322 0.00073336027909815 7.48324511894153e-05 0.000149210334933665 0.000141015776871565 1.55291185856203e-05 0.000409573449474164 0.000493384540755865 0.000120797423954586 9.20279503699895e-06 5.99908935437109e-05 5.71639176742245e-06 XM_003588191.1 LOC100848761 PREDICTED: Bos taurus X-linked retinitis pigmentosa GTPase regulator-like (LOC100848761), mRNA. 0.0 1835 100.00 0.503219415552254 XM_005272633.1 RPGR PREDICTED: Homo sapiens retinitis pigmentosa GTPase regulator (RPGR), transcript variant X1, mRNA. 0.0 704 85.07 0.308073303615651 TCONS_00247956_1 sp|Q92834|RPGR_HUMAN RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator; 3e-120 374 82.69 0.612426035502959 2 noncoding 0 0 0 0 -0.0488710488820561 0.75654885727495 0.117020163645895 0.0960813476843503 ATGGCGCTTACCTCACTTGAGATGGAGAGAGGAGGCCAAGTATATGCCACGGGAGGAAATAATGAAGGGCAGCTTGGACTTGGTGATACTGATGAAAGAAGTGCCTTCCATCTAATTAGTTTCTTTACATCCCAGCATAAGATTAAACAACTGTCTGCTGGGTCTAACACTTCAGCTGCACTGACTGAGGATGGCGAGCTATTCATGTGGGGTGACAATTCCGAAGGGCAAATTGGTTTACAAAATATAACTAATATATGTGTCCCACATCAAGTGACCATTGGAAAACCTATCTCCTGGATCTCTTGCGGATATTACCATTCAGCTTTTGTAACAACTGAGGGAGAACTGTACACCTTTGGAGAACCGGAGAGTGGGAAGTTAGGTCTTCCCCCAAAGCTCCTGGTCAATCACAAAGTGCCCCAGCTGGTGCCTGGAATTTCTGAGAAGGTGATCCAAGTTGCTTGTGGTGGAGGGCACACAGTTGTTCTTACAGAGAAAGCCGTGTACACCTTTGGGCTGGGACAGTTTGGTCAACTGGGTCTTGGCACTTTCACTTTTGAAACTTCAGAACCCAAAGTCATTGAGAGTGTTAAGGATAAGAAAATAAGTCATGTTTGCTGTGGAGAAAATCACACAGCTTTGATAACAGTTCAATTTAATATCAGTGTAAATGATTTAGAGCCTCAAAATATGTCAGTGCTCTCAGAGGATAAAATCTCAGATTTGCAACAGGCCCAAGATCCTGCCAGTTTGCCATGGGCCAGTGTCACCTCTTTGAGCTCCTGGAAACAGCCAAGCTCCTTATACATCTTTGTAGCTAATTTACTCTTTGCTCCGGAGCTCTCTCACCCCTCCCAGATTCTCCTTCCTCAGTTCTTAGATTCAGTGTCCTTTCTTCAGCTTGAGACGGGGTGTGACATTTGTGACGCTGGTCACTATCTCTCCAGGAGATTACCGCGCGGTGCGACCACACCTCCGCTCCGGCCACCAGAGGGCGCGCGGCCTCTAACTTAACCGTCCACTGTGTCTGCGCCTGCGCCGCGCTGGCTGCCCGCCCTCCCCTCCCCCCGGCTCCCACTCTCCTCGCGCCATAACGCTCCGCCCCCGTTGCCCCTAGCGGCCGTTTGTTGACTTCCGGGAACGCGGGAGTAGCGGATGCCCCGAGAGTGGCTATGGGGGTCCAAGGGGCTCTCGGCGCCCGCTTCGGAGCTGAGGCACTGCCTTAGGCCCAGCCGAGTCGACGCCGCCGACTTTCTGGCCGAGGAGCAGGCTTTCCATAGCGCTATTACCATGGGGGAACCCGATAAGATGGTGCCCGATTCGGGTGCTGTGTTTACGTTTGGAAAAACTAAATTTGCTGAAAATATGCCCAGCAAATTCTGGTTTAAAAGGGATATACCTATATCTCTTTCATGTGGAGATGAACATACTGCTATTACTACAGGAAATAATAAGCTTTTCATGTTTGGCAGTAACAACTGGGGACAGTTAGGATTAGGATCAAAAGCAACTGTTAACAAACCAACATGTATCAAAGCTTTAAAACCGGAAAAAGTGAAATTTGTTGCTTGCGGAAGGAACCACACCCTAATTTTAACAGGACCCCGTCTACCTTCTTCATATGCCTTGGTTGAAAGGAGCTGCCATCTCGTCTCCCACGTGGTGCGTTCACTATCTGCTTTCTCACCACCACCACCACCCCCCGACTCCCCGCCCCGCCTCTGCAAACAGTCTGCCTGGAATAGTCTTTCCAGAACAGAAGATGTGGCAGAGATCTATGACTTTTACCAAATACTAAACTCTGCAAAGATGAGATCATCCTCCTTCCCTGAAATTCCAGTCTCGCCCAGTATCTGCCACAGAACAGATTTTGAAAACATCCGATCTACGACTACGGATGAACGAATGAGTGAGGGTGAACCTCTGGATTGGCCCCTTAGTTGCCCAGATAGGCTGCAAGGGGAGGAACATTTGGTACCCCACCTCCTCACTTATGCAGATGATGGGTTTCTGTAG EMBV3_21311 TAGCCATTACTACAAGGGAACCTGAGAAGGCGGTCTTTTTGTATGTACCTCCCGCTGCTC Gene BVV0102_353566 + 1 EMBV3_35358 GK000018.2:48113579-48140548 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29166 TATGTGCAGACAAGCATGGAAATGAGCTGAAAGGCTCCTTATGGCACTGTGACTTGCCCC Gene GeneID:521943|LOC521943:XM_002685612:263_cdna UTR3_Alt 2 NULL GeneID:521943 2 GENE LOC521943 NULL similar to hCG1788238 EMBV3_00491 GCGCCTGAGCCCAAAGAGGAAGGCTCTGCCCCATGCGTGAGCGGGAGGAGCAGCGGGAGA Variant GeneID:507936|UBXN6:NM_001045986:188_cdna 343^961 1 EMBV3_00356 GeneID:507936 7 GENE UBXN6 MGC137213 UBXD1 UBX domain protein 6 EMBV3_09907 CTGGTCCTCGGAGCCTGTGATCCTGTCGAACTTGATGGGAGTGTCTGATGGAGGGAACTT Gene GeneID:100294870|LOC100294870:XM_002691862:167_cdna Constitutive 0 NULL GeneID:100294870 12 GENE LOC100294870 NULL hypothetical protein LOC100294870 EMBV3_00958 ATGGGAGGTTCATCTCACTCAGGATCCGGTCTCAGCACCTGCCCAAAGCCCTCCCCGTAG Gene BVT0102_362177 + 0 NULL GK000001.2:141271041-141349901 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02244 TCAGTGTCCTGAAGCTTATGTTGCTGGAGAGGTCAGGTTGGTTTCTTAGAGCAGTCAGGG Gene GeneID:510784|TMEM81:NM_001075465:49_cdna UTR3_Alt 1 NULL GeneID:510784 16 GENE TMEM81 NULL transmembrane protein 81 EMBV3_41491 ACTTCAGCAACAGGCTGGGACAAGAAGTGGAGAGCAACATGCCTTCTACCTGGGTACTGT Gene BVT0102_095617 + 0 NULL GK000015.2:50841262-50850948 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134532 TCONS_00134530 TCONS_00134534 TCONS_00134531 TCONS_00134533 1 XLOC_081439 NonCoding TCONS_00134534 XLOC_081439 NonCoding NonCoding LOC100847474 23:27323580-27326228 = TSS100266 1439 3 TCONS_00134534_3 36 0.263377345378735 5 0.45825462788062 0.000908457865496402 0.000703036722007526 0.000855818098003108 0.00106109117668082 0.00104049470204135 0.000450089452861121 0.000789795389691947 0.000238980728797311 0.00096037636265381 0.000945777833374952 0.000458300716095404 0.000348156183888618 0.000368285423096151 0.000686620419373947 0.000310998057127874 0.00497530945648941 0.00159316620425996 0.00470329506305047 0.00046708394853263 0.000505962956853137 0.000270614407902653 0.00121748009637307 0.00146486398784321 0.00445643076364507 0.000371561419614056 0.000553299694463599 0.000149652539151495 0.000862616826921034 0.00115406997100106 0.0017785297343821 NM_001113538.1 C15H11orf34 Bos taurus chromosome 15 open reading frame, human C11orf34 (C15H11orf34), mRNA. 2e-23 114 72.77 0.115357887421821 NM_001040438.1 C6orf48 Homo sapiens chromosome 6 open reading frame 48 (C6orf48), 3e-28 131 71.90 0.206393328700486 0 noncoding 1 0 1 1 -1.5850610590777 0.0541680984378436 -0.00689780666133062 0.931100251887279 ACCGCCCCTGCAGTTCTCTTTGTTCGGCGAACACGCACAGAGTGAAAATGGTTCCTCGGCGGTTCCCCAGTTGTCTGCTGCGGAACCTTCGCCAAACCAGGGGGAGGCTACAGCCTGCGCCGTCTTTGCACAGCTACCGGCGTGCAGGCTCCTGATTCTCGAAGGAGGGTCCGGGGCACCACGAGGGAGTTAAAACGTCCTCCGGTGTGTTATTCTTAAAAGAAGGCCTGAGAGCTTTGGAAGCCCAGCCAGGGCAGTACTCCTTCACAGAGATTCCAGGCTAGCCTGGTGACTGAAGGCCTAAGGTTTAGAATTCTCTTGGAGAAGCACTTTTGGGGTGGCTGGGATGTCCAGGTGATGGTTCCTGCCACTTCAGCAACAGGCTGGGACAAGAAGTGGAGAGCAACATGCCTTCTACCTGGGTACTGTGTTTTAGGATTTTGCTGATGCAGAGGATGTCCTACCTGGTGTTGGTCAGATCCTTGGAACTTCACATGTTTCCTGCATGAACCTGTGTGAGCAGCTGTCAAACTCCGGTGGAGAGGGGATGGGCTGATTAGAAGTTTGGGGACCAAAGTCAATTAGGTGATCTTTATTAGAAAGATTGCAATAAAATGTTTTAAAGCAAATAAAAATAGGTGGGTCTGAGCAAAAACAAGAGGGTACAGAAAGGTTTAGGGATGTGAAAGTGAATGAGCATCAGTTGACATCTAGCTGTATGTACCTCTTTCCAGCTACATTACAAAAAACTAAAATTAGGTTTGTCACATATTGACACCAATGTTGAGGATTTCTAGATGGAGTACCATAATATTTTTAATATTTGAGGTTTTAATTATACTATTAACACAATTATTGAGTTTTCTTTTTGATAAATTGGTGAAAACATAGGTTGTCTGGGTATATTCTTAGAAGAAGAATAATCCTGGTGGTTGTCAGGAGCTGGGAATGAGGAAGTGAAGAAGTATGTAATGGGTATTGTTTCACTTTTACAAGGTGAAAGAGCTCATGGGGATGGATGGTGGTGATAATTGCTCAGTGTTATGAACATAGTTATTACCACTGAACTGTATGCCTAGAAGTGGTAAAGATTTGGGGCGGGATAAATTGGAAGATTGGAATTGATACATACACACCACTAAGTATAAAATAGATAACTAATAAAGACCTGTATAGCACAGGAAATTCAGTGCTCCGTAATAGTCTATAAGAGAAGAGGATCCCAAAGTGTATGTATAACTGATTCAGTTTACTGTATACTTGAAACTAACACATTGTAAATCAACTATACCCCAATAAATTTTTTTAATGGTAAAAACATGCTAATTTTATGTGTATTTCACCACAGTTTAAAAAATTGGAGAAAAAGTACCCTTTGCTCCTTTCTGTCACTGTCAGAAAGGTGATTCCCCACTAGCATGTATAGAGTATGCTGTGCT EMBV3_07972 AATTCAACCCAGAGGGCCCCAAAGGAGAATGAGACCACCTGCTACGAGAACTTCACCCAA Gene GeneID:522431|FFAR2:NM_001163784:646_cdna Constitutive 0 NULL GeneID:522431 18 GENE FFAR2 GPR43 free fatty acid receptor 2 EMBV3_11240 AGCTGGAATTCTGCTCTTCTCTAGACACTGCCATTTTGGGAACAGAGTACATAAAGGCTG Gene BVT0102_145162 + 0 NULL GK000001.2:73732432-73740502 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001200 TCONS_00001207 TCONS_00001198 TCONS_00001199 TCONS_00001208 TCONS_00001210 TCONS_00001201 TCONS_00001204 TCONS_00001203 TCONS_00001197 TCONS_00001211 TCONS_00001209 TCONS_00001202 TCONS_00001206 1 XLOC_000276 Coding TCONS_00001210 XLOC_000276 Coding Coding ATP13A3 1:73709362-73735555 j TSS595 4157 1 TCONS_00001210_1 244 7 0.841554673182651 0.00109462013189186 0.002919382768549 0.00094158847345294 0.000245233790507562 0.00085133589070768 1.49787172093004e-05 1.90879614666836e-15 0.000942411048980792 0.000880310605101966 0.00104056275366395 6.51760844802987e-17 0.000115941107636342 2.71539507974764e-06 0.000260036805163041 0.000347202917139789 0.00768644176796728 0.0106510854434817 0.00761947625703609 0.00244160831505268 0.00337646434219445 0.00136931841888882 0.00539554432090086 0.00364009768709633 0.00752093538490438 0.00315199464105218 0.0040963637822755 0.00190702837999366 0.000600162820978842 0.00028949726521953 0.000821812134292965 XM_005201493.1 ATP13A3 PREDICTED: Bos taurus ATPase type 13A3 (ATP13A3), transcript 0.0 7247 100.00 0.966321866730815 NM_024524.3 ATP13A3 Homo sapiens ATPase type 13A3 (ATP13A3), mRNA. 0.0 4078 82.56 0.965840750541256 TCONS_00001210_1 sp|Q9H7F0|AT133_HUMAN AT133_HUMAN Probable cation-transporting ATPase 13A3; 3e-143 435 87.30 0.995901639344262 1 coding 0 0 0 0 0.00758221664150613 0.944482115644529 -0.0263045258294564 0.61081696333403 CTAGGTAGATCTTAAGTAACCTGGGAGACTTCCAGTTTCTCTTCATTGATCTGGCAATCATTTTGGTAGTAGTATTTACAATGAGTTTAAATCCAGCCTGGAAGGAACTTGTGGCACAAAGACCACCTTCAGGTCTTATATCTGGAGCCCTTCTCTTCTCCGTTTTGTCTCAGATTATCATTTCTATTGGATTTCAGTCTTTGGGTTTCTTTTGGGTCAAGCAACAGACTTGGTATAAAGAATCACATCCATATTCATATGCTTTTAATACAACAGAAAGCCTAGATGGGAATTCTTCGCATGTGGATGATGAAACCAATCCTGATAAACATAACATAGAAAATTATGAAAATACCACAGTATTTTTTATCTCCAGTTTTCAGTACCTCATAGTGGCAATTGCCTTTTCAAAAGGAAAACCCTTCAGGCAACCTTGCTACAAGAATTATTTTTTTGTTGTATCTGTGATTATGTTGTATGCTTTCATATTATTCATCATGTTGCATCCAGTTGACTCTATTGACCAGGTTCTTCAGATAGTGTGTGTACCGTATCAGTGGCGTATAACTATGCTCATCATCGTTCTTGTCAATGCCTTTGTTTCAATTGCAGTAGAGGAGTCGATGGATTGGTGGGAGAAATGCTGCTTGTCTTGGGCCCTGAACTGTAGGAAGAAGATGCCAAAGGCCAAGTACATGTATCTGGCTCAGGAGCTCTTGGTTGACCCGGAATGGCCGCCAAAACCTCAAACAACAACAGAAGCTAAAGCTTTAGTAAAGGAGAATGGGTCATGTCAGATCATCACCATAACCTAGCAGTGAATCGGGCTCAGTGGCATTCTAGTAGCAGTATTGAGGAGAGTGTAAATGTAGGACTGTATCTGATCCTGTGTGTCAGAATGGCACCCTTTCAGTTTGTACCCTTCCAATATAGTAGCTGATTGAGAGTTTTTTTTTTTAAACAAAAACAAAAAGAAATTGGCCTGCCAGTTAAATAATTAATTATCTATAAAGTCCTATACCTTCATTCAGTAACTCTAAAATATTATATTTCCAGAACTTGCTTCCTTGTTACCCTCCAGTGATGCTCTATAGGGTAGAGAAGAAAGTTGGTATCTGAAAGGTGTTTAGATATTATTTTCTAAGACTTATTAGTTTATGCCTTTATTTTCACAGCCCCCTTTTTAGAAAAAGTCATCATTTATATACAGTCCCTAAATTTGTGATTGATAAATAAAATGGGTGTTAGTTAGCCTCCAATGAAAATAGGTAAAAAGCCCGTTTTCATTTGATTTCAGTATTTCTCCCAAAGAAAACTTTGTATACATACACCAGTTCCCTTTGATAGCCTAGAGTTAGGAGTGAGTCTAGGATGTTGCTTATAGAACAACTCAGGTAATTTCCATTTATGGTTTTATATTTTCTGTACAGACTGCCTGGGTTTTATTTTTCTATCAGCAAGGTGCTTCACTGCCTTCTTGAGATGTCCCTCAAAGCTATTAAGTGCATCTTGGACTACGTCTGGTGTCAGTAGTGTAATTTGCTTTAGTTATATGTTTAAATATTTTTCAGTAGGAAGAAAGCTTATTTCTTTTGGCAGTAGATGTAGATCTGTCTTTCTAATATCCCTTCATACCTGTTTTTTACCCCCTCTCAGGTTTTATATTATTTTAAATGCCTTTTTATTTTTATTTACGTCTCTTATTACCTAAAGACATAGGATAATTGTCTTTTGGTTTTTTGTGTTTTAGTTTTGGAGTTAGAATTTTCCCTCTTAAAATTTTAAAGGTTTGATGTAGGTCTCTCCTGTCAATAATGAGGCTTAGAAAATGAGCAGCTTTGAATGACTGCTTTTTTTTCAAACCAGTATGAACCTGGTGAGTTTGTTTTATGCCATTAGGTGGCGCCACAGGTCAGAGCGTACCTATTTTGGATTGAGTGTTTGCAAATGAACATACTGGGTTGTGGAAATTTCTGGGAGAAAAAAATGAAGTTCAAAAAAAAAAAAACATTCATTGAGCCAAAAGAAATGTGGAACATGTATTTCACCTTTCTGTTTTTCCTGGTTAGCGTTTAAATTCTAAACAAAATTAAGGTGATTTAAAAATGTCTTTATAGGTAAGATCCAGTAGTTTGGCAAAGCCGAGTTCTGATAAACAGGAAAACTGATACTGCTGTAAAGTAGCTACTAAACTACTAAGACTGTATGATCTTATCCTTTGTTCTTCCTTGACCAGTAGCATGCTTGTGCTTTCTGCTTCTAGCTGATCATTATCTTCCTGATACATATTTACCAATTTGATCACATGTTACCCAGAACAGTAGAACCACATGGTTCTCATTTTTTGTGCTGCAGAGACCTGATGATGTTTGGTAACTGTAGAAAAATGTAAGTTACACTCAGGATCACTGTTACTGCTATGGCCACTGATGATTCTTACAAAAACATAATCGAAGTTTTCCATCAAAAAGTATGATACTATATTAATACACATTAGATGATAAGAACAGTTGTTCCATGAATGATTCTATGAAGCTATGCATCTTAGACCTCTTGAGCTGTGAATTAGCACTTTTTTCTATAGTTACTCTTTTAATCATTTTATAATTTCCACATTCAATTCACTTTCAATACATATGAGTGTATCCTTTGATTTAAATACTGAAGCATATAATTAATTGCTAAGTAGCAGCTTAAAATCCAATTATTAGATTGTATTTAACATCCTTAAGAGCATGATCATAAAAGAGCTATATTTTTGACACCCTCCCCCCTTTTTTAACTTTTAGATTTTATAAGGGTTTTATATCACATCTTCCCATATTGTTTTCAGAGGAATGAGGTTTTTAGGTAGGTAGACAAAGCATTTGTAGGAGGTTAGATTTGAATATAGACAGGGTGGGTTGTTCAGGTGGTTATTGGATGGCTTCCAGAATGTGATTTGAAGAATGTCTGTGAGTTCAGGTGGGTCCTGTTCAGTGCCATAGATAGAGTCCTCTCTCTGTAGGTCACCATTACATAGTAATTTCGATTCTGAATTTCACATTAAATTATTTGAGTGTATACAGATCTAAATTTTAAAATCTGTACATATATTATTTTGATGTATTAAGATTAATAAATATTGCTGATTTAAATTTTATTTATGCATATACTTAAAGGACAGAAATGTCCAGAAAAGTAATTGTTAAATAATATGTAACTTTTTAACTTTTTAAATAAATAACAAGATTTTTAATGTGTGTCTCCCTCAGGGTTGTTTAAAGTTTTTTTTTTTTTCCCCTCCCTCAAATATAAATAGTGGTAACTATATGTTTTGTAACTTTTAGCACCAACTGCTGTAAAGCGATGCTGCAAATAATGCTTGAATAAAAAGTGGCTAAGCCAACAATAAAATAAAAACTTTTTATATTAGTTTTGTAATCCCTACATTGGAAAGCTTTCCAAATTCTACTTGCATTTAAATAAAACTGTTGCAGTTTTTACTATTTATTTTGTTTCCCATGTTTAAGAAAATAACTGCACAGTTTCAAAGGCATGGAAAATTATATCAGCCTTTATGTACTCTGTTCCCAAAATGGCAGTGTCTAGAGAAGAGCAGAATTCCAGCTTTAGAAAACATTCTAAGATTTCACGCATGCAGTTTTGACATATCTGAAAATAAGACTTTTGTATATTTGTGGTGGGAGGTGGTTGGGAACTTTTAACAAAATGTTAATTTTTGTACAGTCTGTGGGCATTTACACATATTTTTAATGCATTAAGATTTGGTAATTATGTGCACATTAAATTAATAGTTACTTTCTGTTATGATTTGTGAATTCCCTAAGACTTTGGATTTTTTTAAGTAACTTTATATCAGAAATGATACTGCATCTTTATATTTTTAAAATTGTATTGCTGCTCAAGAATGGTACCCTGATGTCAAAAAGGCATACATTCAAATTGTACATTCAGCACTGTAAATAACCTTATGAATTTTTTTTTGATTGAAGCTGATCAAAATAAAGATTTAAATGAATGATACAACATTTCTTTTTTTCTGTGTCTTTATATACATCTGTTTGCTCTTCAGTTACATGAATACTGCCCACTCTGGATTTATTTTCCTGCTTAATATTTCTCCTGTTTCTTTTTTTTACCTTTGAATTTTTCAG EMBV3_11411 TCTCACCTGGTAACCCACCCTCACCTTCTGCGTCATAAAGGAAACATTGAGACCACCGGA Gene BVT0102_192484 + 0 NULL GK000019.2:22194713-22240980 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092686 1 XLOC_056956 NonCoding TCONS_00092686 XLOC_056956 NonCoding NonCoding - 19:22207873-22209737 - TSS69687 1769 1 TCONS_00092686_2 82 0.403052572074618 2 0.0515297906602254 0.000346102439130544 0.000994051073333293 0.00103577731533421 0.000469426035752247 0.000468879020122739 0.000230516851083413 0.00022334541718044 0.000177207129195553 0.000471297188496749 0 0 0 6.48791883164033e-06 0.000422801537725142 0.000277342948103064 0 0 0 0.00209168261590358 0.00175415614246209 0.000454758327183106 0 0 0 0.00125527253310046 0.00178924640691858 0.000890961848769506 0 0 0 NM_001102247.1 ZYG11B Bos taurus zyg-11 homolog B (C. elegans) (ZYG11B), mRNA. 8e-62 242 87.19 0.113058224985868 0 noncoding 0 0 0 0 -0.94080167618437 0.00182141982635274 -0.0827544257127471 0.126574703353363 AATAGGAAGGAACTCCAGGTAACCTCCTTAACTTTTCTGAGACTCCATTTATTCCTCTGTAGGTGGGATTAATAACAGCTACCTCAGAGCTGATCTGTGCCTGAGACAGCACTTGAAACACCATTGGACGGTAATGGCGGTCGTGTACTCTGTCTTGCCAGTGCTTCCTTGAGGGAGGAGGCAAATAAATTAGCTCTTAGATGCAGAACTAAATTCTTTTACTTAGTTTATTATTAATTTTCTTTAATGGCCCTGCCGCGAGGTATGCAGGAGCTTAGTTCCCCAGTCAACAGTCCCTTCAGGAGAAGTGGAGAGTCTTAACCACTGGACCACCAGGGAAGTCCCTAAATTCTTTTTCTTCAAAGGCGTTCCTTTGGGCTATATCAAAGAGTTTATTGTCTTTCAAATATGACTGCCTCAAAAAAGAAATGTTTTACTCCTGGAATCAAAGAAACTTTGAAGAGAGAAAACTGGGAGATGGGGGCGGGGGGACGTTGGTGGTGTTTGGGCGCCCTCTGCTGGTCACATAGTGGAACTCCAAGGAGACGGTCAAGCGAGGCCTCTAGGCCTGAGGCCCAAGGCTTTGCCTTTGGCTGCAACACAAATCTGGGAGGCCCCCTCTCACCTGGTAACCCACCCTCACCTTCTGCGTCATAAAGGAAACATTGAGACCACCGGATGTGAACTCTCAACTTCCTGCCCACCGCCCACAGAAGTATCCAGCCTGTGCCTCCTTCCTCCTGCTTTCTGAAGCTGGTTCCTCGCCGGGCCGGGAGCCCTTTCCTCTCCGGTCTCTTAGAGAACCTAGACTTGGCTCCTCTCTCCAGTATTTTTTTCTTTAAAAATGAGTTTATATTTACAGAAAATTTCAGCCTAATACAGAGTTCTCATATGCTTTGCACTCAGTTTCCTTAATTATTAACCTCTTACATAGCACATTTGTTACAATTAATGAACCAATATCGATACATTATTATTATTAACTCCATATTACTAATAGCTGCATATTAACTGCATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTTGCTCAGTCGTGTCCGACTCTTTGTGACCCATGGACTGTAGTCCACCAGGCTCCTCTCTCTATGGAATTCTCTAGGCAAGAATACTGGAGTGGGTAGCCATTCCCTTTTCCAGAGACCTTCCCAACCCAGAGATCAAACCCCGGTCTCCTGCACTGCAGGCAGATTCTTTACCGTCTGAGCCACCAACTCATCGAGTTGGACACCTTAAATATTTGCAATTTTTATTTAAAATATGTAAAGAAAAAAGGCATCACCATAAAAGAAAGTAAAATAAACAAAATGCTATCAACATACCCTTTCTCTCACTTGAAGATACAAAATAGTGAAAATAGTTGCTGGAATCCCCAAGCATTACAAACTTTTGCTCCGGTTCCTGCTTCTGGTGAATTCATAGCTGTGAAAAACGGATAATTTCCTTTTTTTTTTCCCTTTCTTTCTTTAAGGGAATCTGTCACCTGGGATCAAATAAGAACTTGATTAAGAAAATAAGACCCAGGGAGATGCCTTCTAATCGTTAGGGTCCCCCAACAAAACAGAACCAATAAGAGGTTATGATATTTTGATTTTTAAAAAGTACTGAATTTTGTCATAATATCTCTTCTGTTTTATGTTTTGGTTTCTTGGCCCTCATGGCATGTGGGATCTTAGCTCTCTAACCAGGGATGAAACCTGCACACCCTGCATTGGAAGGTGAAGTCTTAATTAC TCONS_00095725 r 5' 13162 TCONS_00095725 r 5' 13162 EMBV3_23870 TGCCATGGAACTGGCTTTGCTCAGGATGTAAACTAGAGAATTTAGAGGAGTGTCTCCAAG Gene GeneID:616791|C5H12orf45:NM_001038689:82_cdna UTR3_Alt 2 NULL GeneID:616791 5 GENE C5H12orf45 C12orf45 MGC133846 chromosome 12 open reading frame 45 ortholog EMBV3_15247 GATCGCCGGCTCCGTGGAGGCGGTGGCGAGACGCTACTACAAGGAGACCTCTGGCCTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26981 GTCCTGTGATGGCGTAAACGCGGTACTACACAGTGACTTGCTCCTCACCCTTGCTAAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26269 ACCGCTAGGGGCTGGTCAGTGTGGACTGGTGGTTCTGGCATTTTGTGTGTATACTGCTTA Gene BVV0102_059229 + 0 NULL GK000022.2:52462512-52465092 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127344 TCONS_00127333 TCONS_00127337 TCONS_00127345 TCONS_00127338 TCONS_00127342 TCONS_00127339 TCONS_00127341 TCONS_00127347 TCONS_00127336 TCONS_00127334 TCONS_00127348 TCONS_00127340 1 XLOC_077628 Coding TCONS_00127338 XLOC_077628 Coding Coding MAP4 22:52306701-52464646 j TSS95267 5536 1 TCONS_00127338_8 1066 18 0.965063566833815 0.00120254149010605 2.12698550251526e-08 0.00114206595302942 0.00113302183393338 0.00082620973877821 0.000675377544835453 0.000961793451895448 0.000151058079291235 0.00178426809497709 2.575914017743e-05 2.12916456832666e-09 5.59463639529122e-05 3.15166178222347e-05 0.000345377606880635 0.000670147109790116 0.0114533986836147 0.00387954836105327 0.0113146698716534 0.00200097481552983 0.000784246721686515 8.2586286434375e-05 0.00604201823294232 0.00366612348116273 0.00434770579592065 0.00211348531960468 0.00221278027393077 0.00069547469701555 0.00172598086471251 0.000862496591934503 0.00260097550311474 XM_005222702.1 MAP4 PREDICTED: Bos taurus microtubule-associated protein 4 (MAP4), 0.0 5800 100.00 0.580744219653179 NM_002375.4 MAP4 Homo sapiens microtubule-associated protein 4 (MAP4), transcript 0.0 2264 75.72 0.52510838150289 TCONS_00127338_8 sp|P36225|MAP4_BOVIN MAP4_BOVIN Microtubule-associated protein 4; 0.0 2090 99.62 0.99906191369606 1 coding 0 0 0 0 0.10336707297122 0.529992752744974 0.0231141703209289 0.726258042526117 CCCTGCGTCCCGCCCCTCGGGCTCGCTTGCTAGCTCCCGGCTCCTCCCGGCCCTCTCCCGGCTCCCTCCGGCTCCGGCTCCGGCGCGGCAGCGGCGGCGGCGGGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCGTTAACAGAGCCGTCTCCAGAAATTGAGGAAGAGATAAAACGGGACTTTATTGCCACATTGGAGGCAGAGGCCTTTGATGACGTTGTGGGAGAAACTGTTGGAAAAACAGACTATATTCCTCTCCTGGATGTTGATGAAAAAACCGGGAGTTCGGAGTCAAAGAAGAAACCATGCTCAGACACTAGCCAGGTTGAAGGTACTCCATCTTCTCAAGCCGCAGTGCTTGCTAACGGTGACCACGGAATAGAACGGAATGATGTCACTGGGTTTCCATCTGAATTCCTTGAAGAGAAGATGGCCTACCAGGGATATCAGAACAGCCAGAACTGGCCAGAAAATACAAACTTTTGCTTTGAACCTGAGCACATGGTAAATCCTATCCAGACTGATCCCTTTAAGATGCACCATGATGACGGCCTAGAAGATTCGCTCTTTTTCCCCAGTGGAACAACCAATACTTCAGCATTTGTAGAACAAAATGATCCCCTGAAAGACACTTATGGTATGTTACCCTGCGACACATTTGCTCCTGCAGCTGTTGTTCCTCAGGGGTGGTCTGCAGAAGCCCCCAACCCTGCACACTTGGAATCCTTCACTTCCCCCGAGGCCGTTCCACAGCCTCTGCAGCCAACAGCAGAGCCAGCTGAGAAAGTAGAAATGGCATCAGGAGAAGAGAGAGCAGAAGCATTGGAGATGATGATGAAACTGCAGGCGGCTGACATGGCGCCATCTCGAGAAGCAGAGATGGTCCTGGCTAAAGATGTGGTGCCAGCCACAGAGACAGGGGTGGCATTGGCTAAAGACATGGAATCACCTACCAAACCAGATGAGGCACTGGTCAAGGACGTGGAATCATCCATCGAATCAGATATGGCCTTAGTCAAGGATGTGGTACTGCCTGTACAAACAGAGGAAACTGCAGTTAAGGATGCCATATTGCCCACAGAAACAGATGTGTCTTTGGACGAGGACCTGGCACTGTCCACAGAAACAGAGGTATCCGCAGCCCAGGACATACTACTATTCAAAGAAACAGAGAGCATTCCACCTGTTACAATGGATTTGGCCTCAGCTGAGGGCACAGTCCCACCTACAGACCAAGAGATGACCCCCGTTAAGGTAGCAGCATCACTCTCAGAGATAGAGGCACCCCTGGATGAGGACATTGTGTCATCCACAGAAATACGCTCAGCCAAAGAGATAGGCCTGTCCTCAGAAACAGAGGTGGCCCTGAGCAGGGAAATGGGACTACCCCCAGAAACAGAGGCCATTCTAGACAAGGACATGGCTGCACCTCCAGAAACAGAAGTCATCGTGCCAGTCAAAGACATGGCTCCATCCCCAGGAATAGAGACGACCCTGGCCAAGGACGTGGCTCCACGTCAAGAAATAGAGGTGACCCTGGGCAAGGATACGGTTTCACTTCCAGCAACAGAGATGGCCCTGGGCAGGAATGTGGCTCTGCCCCCAGAAACAGAGGTGACCCTGGCAAAGGATGTTGCTCAGCCCCCTGAAACGGAGGTGAACCTGGCCAACAATGCGGCTCTGGCCAAATTCTCAGAAGCAGAGGTGGTACCAGTTCCTGTTAAGGACATGGAAACTGCACAGACCCAGGAAGCAACAAGTGAGGATTCCCAGTTAAAATCTCTCCAGGATGAGGGACAGTCAGCTGTACCTCTCATGACTTCACCAGAAGCAGTCGTGGCCATGGGCCAAAAGCACAGCTTGCCAACAGATGAGGATTCTGTGTTAGAAGAACTAGAGCAAAAGAAACCATCTAGTCAAACTTCTGAGCTTCCTTCAGAGACTTCAGGAGTAGCCAAACCAGAAGAAGGACCACCTACCGGAAGCGTGTCTGGAAATGACATCACCGCCCCTCCAAACAAGGAGCTTCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACAGCCCACTTCTCTCCCTAAGCAGACAGCTCCCACCACCCTTGGTGGATCGAATAAAAAACCCATGAGCCTTGCTTCAGGCTCAGTACCAGCTGCCCCACCCAAACGCCCTGCTGCTGCCACCTCCAGGCCTTCCACCTTACCTTCAAAAGACACGAAGCCCAAGCCTGTTGCAGAGGCAAAGATTCCTGAGAAGCGGGTCTCTCCATCCAAGCCGGCTTCTGCCCCAGCTGTCAAACCTGGCTCCAAGAGCACCCAGGCTGTTCCCAAAGCCCCAGCAACTGCAACTCTTGCTTCACCTGGGTCAACCAGTAGGAACCTGTCCACACCCCTGCCCAAGAGGCCCACTGCAATCAAGACTGAGGGGAAACCTGCAGAGATCAAGAAGATGGCTACAAAGTCTGCACCAGCTGACTTGAGTCGCCCAAAGAGCACCACCACAAGTTCTGTGAAGAAGAGCACCACCGTCCCTGGGACAGCACCCCCAGCAGGGGCTCCGAGCAGAGCCAGGCCCACAGCCACGCCTCCCCGGCCCTCCGGGACTCCTCCCGTGGACAAGAAGCCCACAGCAGCCAAGCCCACCTCCTCTGCCCCGAGGCTGGGCCGCGTGGCTGCCAACGCTTCTGCCCCTGATTTGAAAAATGTCCGCTCCAAGGTCGGCTCCACCGAAAACATCAAGCACCAGCCTGGAGGAGGCCGGGCCAAAGTAGAGAAAAAAACAGAGGCAGCTGCTCCAGCTCGAAAGCCTGAACCTAACGCAGTCACTAAAGCAGCCGGCCCAATTGGCAATGCACAGAAACCGCCTACGGGGAAAGTTCAGATTCAGAACAAGAAGGTAGACATCTCCAAGGTCTCCTCCAAGTGTGGGTCGAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAGATCGAAAGTCAGAAGCTGAACTTCAAAGAAAAGGCCCAGGCAAAGGTGGGATCCCTCGATAACGTGGGCCACCTGCCTGCAGGAGGTGCCGTGAAGACTGAGGGCGGTGGCAGCGAGGCCCCTCCGTGTCCGGGCCCCCCTGCTGGGGAGGAGCTGGCCATCCCTGAGGCAGCGCCTGAAGCTGGCGCCCCCGCTTCAGCCAGTGGCCTTAGTGGCCACACCACCCTGGCAGGGGGTGGTGACCAAAGGGAGGCCCAGACCTTGGACAGCCAGATCCAGGAGACAAATTGAGACCTACAGGCTGACGTTCCGGGCAAACGCCAGGGCCCGCACCGATCACGGGGCTGACATTGTCTCCCGCCCGCCCTCACTTCCCTGGCGGCCCCAGCTCAGGCAGCCGGGCCCCTAGCTCCCCGCCCCAGGCCGCCCCCCATCCTGTGGCTCGGGCCCTGGGCAGCCCTCTAGGCGCCCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCGCTTGCCTAGGGCAGCAGCTGTTCCCCCCACGCCCATGTTCCTTCCACTTCCCGCCCGAGGCCCAGCTCCCTGCTTGGCTTGTATCCTCACCACTTCGCGCCGCTGCTCCACGAAGGTTGGGTGGAAAATGGGGTGGGGAAGAATAATTTTGGGATCTTCTGAGACCTGGGGTGTAGGGGCGAGCTGGATCCCAGCATACTCTTCATTTGTTTGGGTTTTTTGGACCAAACCCAAAAGAAACTGACATACCCTCCCTCCTCGCTGGTCCATCCGGAGGGAAGAGTGGAAGCAGACGTCCACGTGACGGCTGCCGTTAACTGCATCCCCTGGAGCCCGCTAAGCCACCGCCTCTTCCTTTGACCCTACGATGGTGCCCGCCGTGCAGGTGGTACCAGGCGCCACTTGCTGCCCTCCCCAAGTTAGTCAGAGGCAGCGTTGCCTGTCCCCGCTCCTCCCCATACCTGCCTAGCTGCTATCACACTTTATCTTTTCTTTTTTAATAACCCCTAAAAACCAGTGGAGTAGTTTTGCAGGTTGAAGCCATGTCTAAATGAAAGTCCTCAGTAGGTGTTAAAGGAAACAGGGAGGGGAGATCCTGAAGCCTCCAGCCGGGAGGTCAGGTGTCGGGAGCTGCCCTGGCTTGGGCAGCTCGGGGCCCCAGCCCCAGAGATGGTGTGGGCAGGGCAGGCGTGGTGTGGGGGCTGTGGGCTGGAGAGCAGGCAGGGACCGCTAGGGGCTGGTCAGTGTGGACTGGTGGTTCTGGCATTTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTGTTTGTCTCATTCCCTGGGATCTGGTGGAAGACATAAAATTGGGACTGGAGAGGGCCATGGAGGTCAAATTCCTCCAAGCCTGCAGCCTAGGACACTGCCGGGGAGCCCAATGTGCCCGGCACGCATGTGGATAGTGGGGAATCAAGGTTGGAAATTTGGAAATAAGGACATGCAGTGGGCCGTCCAGGCTCCCTTGTAGCCTGACTGGAAAGGGGGGAGAGGCGAGGCGAGCCCAACCTGAGGAGGCGTGTCCCAGTTAGGCCTGGTCTTGGGATGGCTGCAATGATTAGCCCTGGGGATTATAATGACATGAAGATTCTTATTGCACTTGTATTTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTAAAATGTAACAGTTTGTAGTGAAATGGCCTGGGAGTCTCCGAGGCTTCTCCTCTGAAGACTGTTTTCTGCAGTGCAGACTTGGCCCCTTTACCCTCCCGCCTCCTCTTCGGGCGTCCCCTGGCGCTGAGAAGGTGGGGGGCCCTTGAACTAGGCTTCATGCGGATTTGATGTCCGTGTAGAGGGAGGGTGTCTGGGCTGGGAAGGTTCTCCCCGTTTCTGAGGTAGCATTTTCTCTAGGGAGATTCGATACCACATCCCCAACTCCCCAAGCACTACCAGGGGTAGAAATTGCATGATCTTGTGGAAAAAGCACTTCCAGAGCCAGAGACCGTCCAGGGTGCTTCAGTAGCGCCAGGGACATCACGGTGTCCGTGTTTTGTCTGCAGAAAGGGGTGAGGGAACTGGGAGGACACAGCGGGAGGTGGGGGGGCAGTGCTGGGCCTCAAGGTGCCTGCACCCATGTCGACGCTGAGGTGGGCAAGCTCTGGGTCTTCTTCACTCCTTTGGCCAAAAGCAGGGGTTGGAGAGGTGACCCAGTGGAGGGCCCTTGAGGGGGCGCTGGAGTGGTCAGTGTTCTGAAGGGTGGTCTGGTCACAGTTGCCTTGATGGGTCCCACCAGCCAGAGCAGCTGAGAAGGCTGTCCCGACAGGTGGGTCCAGAGGCCCTGCGTGCTCTGCTCTGCAGCCATCGGGGCGGGGATGTTTCTGTGCTTCCCCATTTGCTTATGGCTCAGCCGTTCCTCATGTCAATCTGTGATTCTGTTGTAACGATTTCCAGAGTAAATAAAGCTCTTATGTCCTAAATAC EMBV3_16278 GTTTGTGATGTGGTAATCTAGACAGCCCCTTTGGGGAAACTTCAGTCCCAGTGTCGTTGC Gene GeneID:525329|NCOA4:NM_001075868:26_cdna UTR3_Alt 3 NULL GeneID:525329 28 GENE NCOA4 MGC138109 nuclear receptor coactivator 4 EMBV3_06391 TACCTAAAGTTGGCTTGTTCATCATTGCATTCTCAACTCTGGTGTAGCATCTGGCCCACC Gene GeneID:281426|PRND:NM_174158:5_cdna Constitutive 1 NULL GeneID:281426 13 GENE PRND dpl prion protein 2 (dublet) EMBV3_23046 TTCAGGGCATAAATGAGGCTGGAACCCTCCTGGGAATCTGGCCCGTAGTACTTGGAAGTT Gene GeneID:511573|ZNF142:XM_002685572:153_cdna Constitutive 0 NULL GeneID:511573 2 GENE ZNF142 NULL zinc finger protein 142 EMBV3_08341 TACAGCTATCATTGTTAGTTCTTGGGACATTCACCGCATGACAGAAACAACAGCAGGCCC Gene BVT0102_089407 + 1 EMBV3_18688 GK000030.2:81951479-82023910 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244806 1 XLOC_150558 NonCoding TCONS_00244806 XLOC_150558 NonCoding NonCoding LOC100849028 X:81946752-82029274 j TSS183910 7244 3 TCONS_00244806_3 103 0.190364439536168 11 0.91234958374232 1.62326791011992e-05 1.4385802911252e-05 1.48407764971216e-18 5.50243003821061e-17 3.44252373939446e-05 4.81119999724802e-42 8.49818266884294e-06 4.1896882985035e-76 3.23576993011829e-06 3.43989647324574e-17 2.27340653477632e-47 7.79740822619693e-145 1.08128665101366e-06 9.76012759757265e-06 2.06968463623986e-122 0.00444577838814953 1.01354111241456e-05 0.000671061014528136 2.71433423209669e-06 2.73165367653874e-75 2.16280543725858e-29 0.000328466327618773 0.000478803039887985 0.000462135234770716 4.90926234332937e-57 1.58024317856853e-66 5.87183154236673e-05 6.88112590270085e-40 9.53425737264561e-05 1.0181214708825e-71 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 3e-69 269 89.42 0.0284373274434014 NR_028379.1 FTX Homo sapiens FTX transcript, XIST regulator (non-protein coding) (FTX), non-coding RNA. 8e-76 291 73.87 0.0599116510215351 0 noncoding 0 0 0 0 -0.0233074661742657 0.825452174400281 -0.00113715728862404 0.984334505084538 GCGCATGCGCATTTGAGACGACATTGTGAAGGTTGGATTTAACGCGAGGGGGAGAGGGGCGCATGCGTATTTCAAGCGAAATGACGCGAGGAGGCGCGCAGCGTACGCGTAATTAAGATTGCAAAATGGCGAGGGGGGAGGTGACACCAAACTTGATCAGAAACCATGCCACAGGTGAAGAGGTATATTGAGCCCTGCCTGGCCAGTGAGGTTACTAGAGAATTGGAAGAGGCTCAAGTCAGCATCCTGCACATGGTTATCAAACCATTGTGAAGTCTTATCACCTGGGATACTTGTTAAAAATGCAGATTCTTGGGCAGCTAGAAACCTTGTCACTGGTCAAGAGCAACAAGTAACAAGACCTACTTGTCACTTATCCTGAGGCATCGTGCCCAGTGGGTTTACCAGCAAACCAGAATAAAGCATCATTGCCCTGGATGTCCTTGTGAGATGGTTGGGAAGTCTTGGCTGAACTGTGGAGAATATCTTTGAAAAGTGTTTTAGAGAGTCTACCAGATTGGCCATGTGAGTGCCTGTGCAGCAGAAGAGTGGGTCTTCTCAGTGGTTAAGGTAACAAAGTGATTAAGGGCCCTTAAGCCTGGTTTCTTTCCATGGAAAAGAGCATGACAAAAGACTGAGTGTCGACATGTCCCTGGCAGCAGGCATGAACGAAAGAAAATGGCTGTGCACAGAGGGAGAATTGATCACTGTCTGTTCTTCAAAGACGCTTCCCTGGCAGTGGTTGGGGCTGTTAGCGCTCACTGCCCTAACAGAGACCTGCTTCAACAGGGTACGAAGATCCATCATTTGGCCCAGCTGTATTATGGGATCATCTGACTTCATGGTGTCATTGAAAGGCTTACGTGTGCTAGTGGATGAAAATATTTCAACGCTTCTCTCTGCCGTCTTTTTGCTGCCATACACTGTGCTGGGTGATGGGGATATGGAGATGAATTAAACATGATTCCTGCCCTCAAGGAGTTCTCAGCCTAGTGAGAGTTTGACATGTACACAAAGAATTACAACAGTATGGTATGCTCTACAATGGAGGTATGTACAAGATACTGTGGGATTCAGAAGAGAAATCATTTGACTGAATCTGGACATGCAAAGGTTAGAGAACTGATGATTAAGTTGAATCTCAAAAAAAGTAAAGATTGACTAAGCAGAAAAAGTATGGAGATTAGAAATAGAATGATAAATTGGGAATTACAGTTAATTCATGAAATTAGGTTGTAAATGTGGGCTGGGAATAGACCTTTATATAGTGTGAAATGAATCAAGTGAAAGTGAAGTTGCTCAGTTGTGTCCGACTCTTGTTGTGTGTGACCCCATGGATTGTAGCTCACCAGGCTTCTCCGTCCATAGGATGTTCCAGGTGAGAGAGTATTGGAGTGGGTTGCCGTTTCCTTCTCTAGAGGATCTTCCCGACCCAGGGTTTGAACCCAGGTCTCCCGCATTATAGGCAGACACTTTACTGTCTGAGCCACCAGGGAAGTCTTATTTTGAATCAAAGCAAATTAAATTTGGATTTCATTTTGAGTGTTTTAAGAAGGGGATGCTTTTGATGGTCACTGAGATGGTAGTAAGTTATGGAAGATTTTCAGATCTAGACAGGGAGATCAGTTAGAAGGATACTATAGTAGTTAAGATGATAAGTGATCTAAAGCTGGAAGGAGTGACAATGAAGATAACCTCTTAAATACAATGTTAAACAAATTATAGATATAATTAGAACATGGGAAAATTTAGGCTTTCAGACTGGCAAATGGGTATCCTCCATCCCCACCTTGACCTTCATGAAAGATCCTTGCATGTTTTATTATTTAGGTGTTGCCATTGGTTTCTTCAAGACCAGGGCTTGGCTGCATAGATTTTGCAAGTTCTTTTAGGGGGTGGGGCAGCCATATGTGAAATGTCGACTCTAAGAAAGACAACTGAAGAGCCGCAGACTTCTCATAGTGTTACTAAGTTCTTGATCCTTCTCATCAGTAGCAGGGCTACCCACACTGTCACGTATCTTCCAAAATATTTTTTACCAAAACTGGAGGCTTTTATACCCTCTCAAGGAAGAAATGGCCTTGGTTGTTATTGTCTTAATGCTTTATTTTGCTTAAGGATTTTTGAATGTTTATATCTCCTGGTAAAAAATATTTACAATAATTAAAAATATAAATATATCCTGAATTTATTTTCTTGTTTCTCAAAGCAATATAAATACAATGTTTGGCAAATTCTCTCCTTAAGGCTCAGAGGATTCAGAGAATGGCCTTCTGTGACTAGAATAATTGATTGGAGAGTATGTTTAAGTAGACCTTTTGTATTTTCAGTGAACCTTATGTAACTAGCCATGCTGAAGAGCAGTGGAGGGGAGAAGGGTTGGAAGAGGAAGCCCTGAGCAGGACAGCAAAACAGTACAGTGACAGTTTGGGCCTTGCACTCAGATCTAGTCTCATACTTACCAATGTAGTTTTGAGCATGGTTTTTCACCTCTCTGTGGTACTTTATTTCTTCTTATGTAAAATAGAATTAGTGATATCTTTTTGCAATGATGAGTGGGGGTGGGAATATAAGGATTTAATGGGATTATTTGTGTAAATTGCTTGGAACAGATGTGGGGTATGCTGAATGCTATATGAACTGTAGCTGTTGATAATGATGTTAACCTTGACAAGGATTTAAAAAACATAGTTAACTAAAGGTACTTAACATTTTATATTGTCAATAAGGATGTTGGGGTTTGCAAAAGAAAGTAAAGCTACCTGATCTCAAGGTTTTCAGTGGCATGCTAGAGGGAAGTCACTTTTCTGCTTTTTTTTTCCCCCTCTGCCAAATAGGTTGGGAAACCAGATGACTTTTGTCCATGCCCTGATCACTAATCTATTGCATTTGCTCTTATTTCCAAATATAAAACTGTTGAAATTTTGTATAATACCTAAACTGAATAAAGTTATCCTAAAAAATGTAGAAAAATACTTTGGAATTGGTCAAAACTGGATTTGAAACCTATTACTAGCTATGTGATCTAAGGCATGTTACTTAACCTAATTGAACCTCAGTTTCTTAATCTAATATATAATAATTAATTTGCAGGGTGTTCATGAGGATATTGTAAAGTGTGTGTTATAAGCACGCTATAAATTACAGCTATCATTGTTAGTTCTTGGGACATTCACCGCATGACAGAAACAACAGCAGGCCCTGGTGGCTGGGAGGACTTCATGGATCCAACAGCAACCTGAAGAAATCCTACTCGGATGGATATAATACAACCTGCTAAGTGTCCTAGCACTTATCAGGTTGTATTATCATTGTCCGTGTCTATGGCTCTCGTCTACCAGACTCTAAATTCCTTACAGGCAAGGACAGTGCCTTATTCATCTTTGTATTCGCAGTGCCTAATCCGGTGCACATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGTGATCTCCATGGGCTCATCTTGTCCCCGCCAGTTGCCTACAACGTCCAAGCTGTCTTCAATATGCTTTCTTCTGAAGCTCACTCCTGTCTTCTAATTCTTTTGCCAAGGACTTTTCTGTGTAGTGCAAAGACAGCAAATATACTTCATCTCAAGTACCATCTCCAGTCAATTGATAGTACCTGTCTTTATTATGTTCTATAAAAACAGTTCTGAAGCCAGGTGTCAACTCAGTATGAAAGAGGATTATAACTAATTAGTGATGTTTGCTGGGGGTGGGGGAAGGGGATTAGCAGCATACGTGCCATATATATGTCATATTTAATATTGTGTTTTCCATGAAATACTCTGTTTCCATGCCTGTATTTTAGTCTTGGCTACTTGCAGATGTTGCATTGCTGCTGCTGCCACCACTGCTGTTACTACACTACACTTGCTACGAGTTGTTCCTTGGGTAGGACCAGAGTGATCATTGATCAGAAACTCATCCTCACAGTCTGGGGTTTGCTCCTGTTGCTGGTATTCACAGTTTTCCCCTTTCAACTTTACCTCAGCTAACCCCTTACCTACATTAACAGGTAGGCCTTTGGTTTATGTTCACCACTCAACAGGCTCATATTTCCTTTTTATTATTTACTGTGATTAATCATTGCTTCATGAGAAGCCTTCTATTAGAAGATGTGACAACTAGAATACAAGTTAAACCATTCCATCAAGGCCCTACAGTGAATCATATAAGCTCCCTTTTAATATAGGAGAAAATTGAGCATACTCACACACTATAAGGCAAGGGAGAAGGGAGATATTGTACATATAGGAGAGAGATGATAACATATGGCTCTTAGAACATAGGCGGAGGGCTAGCCTTAGATCAAAGGAGTTACCTCTTTACTGGGGCATAGTGATAAGAATAGGAATTAGAAACAGTACTGATAAGGGTGTTGGAGATTTTTAATTGTAGAGGTGGGTGAGAGGAAGCTGACCAGGGACAGGATTACAGAAACAAGAGTCTTAAGAAATATCCAGGCCATATCAAAGTGAGCAACTAGTTTGAAACTTGATTAGAGACTCAGGAAAAGAAAAGGTAATCTTGGGCCATTGTCACAAGTAGCATTTGGTCGCCTAGAATTGATTTTGCTTGATTGAGGGATAGGGGCTTCTCAGGTGGCTCAGTGGTAAAGAATCCGCCTGCCAGTGCAGGAGCCACAGGAGATGAGCAGGTTCGATCTCTGGGTCGAGAAGATCCCCTGGAGGAGGGCATGGCAACCCATTCCAGTATTCTTGCCTGGAGAATTCCATAGACAGAGGAGCATGGTGGGCTACAGTCCAGAGGGTCACAAAGAGTCAGACATGACTGAATGAGCATGATTGAAGGATGGACAGCTAGCAAGAGAAGAGTTAAACACCAATGGATTTGAGTATCCAGATTGTATATGGAAGGAAGGTCAGAGTCTACATAGAAAAAGTGGCCTTAGTATGATCAGGATGGGTGCTGAGTCTTTGGAAAATGGTATGATAGGATCTATATCAGAGACTGAACTTTGGAATGGTAAAATTTAAAAACTGGAGTGATCAAGATACCCATGATGCTAGGATGTCAGATGGTTGTTTACTTGGGTATTGAAATGACCCAGGATTATAGCAAAAGCTGGATTAGGAATGAACACTGAGGGCTAGATAAAATAGGTTTCAGTGACTGAAGAATGATCTGGGGGTGGCACATGACAACTGTACAGGTGCAAGAGAAGAAAGGATGCAGTGGGTGGAAATTACTAGAAGATGCAAAAACTGTTGTTTTCCATTGCACTGAGGTTTTGGCTGGCAGAATGCACATCTAAAATGATTCCCTTCTCTATCAAGTGCTTATTCTATGCCTGACATTTTGCTGTGTGCCATATGTTTCTCCCTTTTGGTCTGTCACATATCCTGTGTGAAAATAAACAGCAATCCCAGGTGAGGGTTAGGGTTAGACTGCTGGCCCTTAGCACTGGTGCAATCCTGTTGCCATCTCCTAACTCTTTGAAAGAGCAGAAGGCTGGTCATCTGCAAGTGTCAGAAAAAGATTTAGGATCAAAATTTCCCCTTGACCTTGATGTAGCTTGATTACATGGTACATGCTTTTGTTGGCTGTGTTCCATAATATGCTTTGGCCTCTGAACCTCTGAGTTGAGGAGTGAACTAGAACTGTCCTTTAAAAGACAGGCACAGTTCCTTAAAAACACATATTAATTCAGAACGAGACACAGTCCTATTATCTAATTGAGCTTTTAAGATAAAGAGTAGACAAAAGAAAGCCCACATCAGTGGATGAATAACAAAACCACTTTGTAAAAGCCATTTAGGGTCAGGATACATCCAGTTTAGTGGCCCTGTTGTAGATGTTCCCTGTGTTGTTGGGAAGGAGGGCTGGGAATTGATGCAAAGAAATAGCCCTTAGAACTTGGAAGGTAAAGTTTAGGGTGAGTCTCTGTGAGCCCTCTGACACCGCATGCAGTCCTTTTTCTTTTGTTATAGTCTTCAAACGAGTCAATATTCCAATGAAGGTTTAGAGCCAGTGTGTTAGAGTGACCAGGCCTTCAGACAGCCTATCCCCTCCTGTGGGGGCTGCTGTATATTTATTCCTCAGGAGAAGCTGGTAGAAGACTTCATGAAGGAGAAGAAAAGGAAAAAAATCAAAGGATGACTACAGCCTCTCTTCATCTCAGCTTTGCAAAGCATGACTCAACAGAGAGATCACATTCTTGAAGACTCTCCAGACCACAGCCACCACAGACACTAACCACAGCCAGCAACTGGACCTCAGCCCTGGGATTTACTCTTGATGTCTCAACTGATTATGAAATCAGTAGGAGAGCTTGTATCCCTTTCTAACTTGCTCATCAGAGATTTTAAGATTTGCATACATGTGGTAGATTGAAGATAAGTTGTTGTGCTGCACTATTTCTGTTGCTACTCGTGAGAGTCACTACCAGCCTCTCTTCTCAGGATTAATGAATGGGCCAGAAACCGTGGGCAGAATGACTTCAGGCAACCCCAAACACCAGATATTGGCATAAGGAAACAGTACAATGAAAAGTCAATACTTGGACCTTTGTCATTCCACAAAGCATGATGTACTATCTAAAACAAAAAAGAAGAGCTGCTTTGGAGAAGGGTTTTAAAAGTTTGTTTCATCAGAAGAAAGATTTAGAAGAGGGAAAACTTCCAGTTATATAAGATGGGCATTTAGCTTTTAAAGGCATCTGTCCCCTGTGTAGGTCATTGAGATTGATACCAGGAGCAGACTGTGGCTGCCAAAGACAGTTTAACTAAGTGGTTTCATGCTCCTAGAGAGATGGTGTCACTCTCTTGTCTCTCACTTTGGTGGATATTCATCTGCAATGAGTCCAGTACCTGAAGGAGCAAGAGAACAACAAGTATACAGGGGGACAACAGTATGGCCTTCTGAGTGAAGATAGCAGCGGAAAATGTCATGAGATTGACTGCATTGGGCTGGGCTTGTTCTTTTAAAAAAAAAAAAACAAGTCTTATTTTTGATGATAAAAGTAACAGGTGGTCATAGTTAAAAAAATAAAGTGAAAGGTATAAATTAAAAAGTAAAGAATATGATTTTACAACTCAAAATCTTATCATTTGCATGTTTCCTTTTACAACTTTAAAAAAGTGTAACAGTTTAAAATTGACATTGTACTTGTTAATCTCCAACTTGCTCATTTGAAAATAAATAAGCATTTTTCCATGTCATTAGAATTACTTAAAA EMBV3_36482 GTGCTGTGATTATACTTCTTGCCTTGACTGTGACTGGGTTGAGTGTTTCAGTCACTTCAG Gene GeneID:407181|KLRB1:XM_002687839:181_cdna Constitutive 0 NULL GeneID:407181 5 GENE KLRB1 NKR-P1 killer cell lectin-like receptor subfamily B, member 1 EMBV3_23665 CGATTAGCAATGTTGAGCATCTTTTCATGTGCCTGTTGGCCATCTGCATTTCCTCTGTGG Gene BVV0102_324689 - 1 EMBV3_26276 GK000001.2:95768273-95795891 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16909 GGAACTATGAGAACTCAAGGTGGTTGAGAAAACGTATATCTGAGGTGTGAGGAAGCCGTC Gene GeneID:506859|ZNF317:XM_002688767:88_cdna Constitutive 3 NULL GeneID:506859 7 GENE ZNF317 NULL zinc finger protein 317 EMBV3_34553 TTGCAGCCTGCCTCCGTTTGTTGGGCAGTTTGTTTCAAAGGGTTATTTGCGTCATCTCAG Gene GeneID:540225|COX7A2L:NM_001034695:158_cdna Constitutive 2 NULL GeneID:540225 11 GENE COX7A2L MGC127892 cytochrome c oxidase subunit VIIa polypeptide 2 like EMBV3_03984 GACTTCAGTCCATCCTATGTAGGAAGGTGAAAGCTTGCAATAGTCCTTTAAGGCCACTCT Gene GeneID:614958|HIST1H2BN:NM_001081742:34_cdna Constitutive 0 NULL GeneID:614958 23 GENE HIST1H2BN NULL histone cluster 1, H2bn EMBV3_16874 AAGGGTCACAGATACGTCAACAACGACAAGACCCCGAAGGAGGACCTGTGCTCCAAGTTT Variant GeneID:508216|MRPL28:NM_001045996:96_cdna 318^470 3 EMBV3_38126 GeneID:508216 25 GENE MRPL28 MGC126950 mitochondrial ribosomal protein L28 EMBV3_23866 TCTTTGCAATATCCACACTCTTCCTGTCACCAAACATGACTGAACTATCCAGGGCCCCAG Gene BVT0102_125183 - 1 EMBV3_30026 GK000010.2:26333874-26351671 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016523 1 XLOC_008824 NonCoding TCONS_00016523 XLOC_008824 NonCoding NonCoding - 10:26346537-26347428 - TSS11482 891 3 TCONS_00016523_3 48 1 0 0 0 0 0 0 0 0 0 0 0.000720382787375522 7.70767719683937e-06 0.000200655904293549 0 0 0 0.00029642621789033 0 0 0 0 0 0 0 0 0 0 0 0 7.62787001506695e-05 0 0 noncoding 0 0 0 0 0.107704309772468 0.337233054724601 -0.0018895485071479 0.977805738687663 ACCAGAGTGGATATACATGGATTTTTTTTTTTTTTTTTTCTGAATAGAGGTATAGAGTTCCTGACACTCTGATATCTCTCCAAGAAGACTGATGATAAGCCTGAGTGTAAAGGGGATGATGTTGCCGAGGAAATCCAGTTGTAGGCAAATGAGAAGCAAGTGGATGGTGTCTTGAGCCTCGAAAAGTTTGAATATGACTGACATACCCAAGCCCTTGGGATCCTGAGCTTGTCCTCCTGGAGAAGGGACTGTGTAGTGTCAGGGTTCCTACCACTCTTTGCAATATCCACACTCTTCCTGTCACCAAACATGACTGAACTATCCAGGGCCCCAGGCTTCATGCTTGTGAGGGTGGTGTGTTCAAGGCAGGCTCCTGAGACCACATCACATCATGAAGCCACATCAGCGACTGGCTGATCCCAGGCCCAAGTGAGAAAGTGAAGGGAAGTCCATGTTTGTCCCCTTCACAGAATGCTTGGAAATTAACCCCTGAAATCCCCTTAAGTTCAGAGGCAGCCCAGGAAGGTTAGAACTACTTTACCACACCACTGGGCCCCGGGCCCCAAGGAACCTCCTTAGAGAGGCTGTGGCCAGGCCCACCCACACCCCCACACTCTCCTTTCGGGTAGGGCACTTGCCCCTCTCCCAGCTTATACAGTTTTCCTGGCTCTGCTTCAGGAGTGGGGCTCTGGATTCTGGGTCCTCTGAAGCCAACTCCATGGAGACAGAGGTCACCGTGGATGGAGGTAATTTGGGAGTTCCCGAGGAGTCAAACAGCCCAAGTGGCCCATCGAGCCTGTCACAAAGCTTTGCATTTATCAACCTTTACTGAGCAGCCCCTTCCCCGGGGGCTGTACAGTCTTCTCCTAATTTCCACCTCCTGCTGACACC TCONS_00016524 s 3' 4244 TCONS_00016524 s 3' 4244 EMBV3_32445 TGTAGGCGCCAGCACAGCTCCCGCTCCTTTGATTTTGGATTTTGCCATTCAGAACATGCT Gene BVT0102_103498 + 0 NULL GK000019.2:56363248-56373298 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094684 TCONS_00094687 TCONS_00094685 1 XLOC_057518 Coding TCONS_00094687 XLOC_057518 Coding Coding TRIM65 19:56359582-56364564 j TSS70765 2920 1 TCONS_00094687_3 362 0.0633561643835616 6 0.414976912266613 0.0048131309850289 0.00378371711835759 0.00546824386526053 0.00324020584953302 0.00290024029459686 0.000489201463817383 0.00247465362791339 0.00242643205963892 0.00322154989087365 6.20103203678328e-05 0.000246165627171393 0.000158001987589508 0.000321185206559937 0.000799112034281817 0.000537235555915479 0.00110408015171985 0.00112774093839317 0.000171640732010513 0.00221543161204234 0.00394060656279206 0.00150772516042763 1.98974728598913e-17 6.49376094199138e-10 0.00057430596612933 0.00461123321578172 0.00298959857103894 0.00247265995149752 4.65760716422707e-05 6.83682044996043e-05 0.000475625958174172 XM_002696207.3 TRIM65 PREDICTED: Bos taurus tripartite motif containing 65 (TRIM65), 0.0 5112 98.50 0.986301369863014 NM_173547.3 TRIM65 Homo sapiens tripartite motif containing 65 (TRIM65), transcript 0.0 1481 79.49 0.547260273972603 TCONS_00094687_3 sp|Q6PJ69|TRI65_HUMAN TRI65_HUMAN Tripartite motif-containing protein 65; 9e-153 445 74.30 0.889502762430939 2 coding 0 0 0 0 0.00374360867726343 0.979823203319151 NA NA ATGGCCGCGCAGCAGCTGGAGGACAAGCTGACCTGCTCCATCTGCCTGGAGCTCTACAAGGAGCCGGTGACGCTGCTCTGCGGCCACAACTTCTGTGGGGCCTGCATCCGGGACTGGTGGGGCCTCTGCGAGAAGGTGTGCCCCGAGTGCCGGGAGCCCTTCCCGGACGGAGCCGAGCTGCGCCGCAACGTAGCTCTGAGCGGCGTGGTGGAGGAGCTGCGCGCCACGCCCGGCCCCGGCCCCGATCCCAGCCACGGCGCGCGCTGCCCCCGGCACGGCCAGCCGCTCGAGCTCTTCTGCCGCACCGAGGGCCTCTGCGTGTGCTGCGTGTGTACCGTGCGCGAGTGTCGCCTCCACGAGCGGGTGCTGCTGGACGCCGAGCGCCGGGCGCGCGAGGCCCAGCTGAGAGCCACGCTGGAGGTCACCCAGCAGCAGGCCGCCCAGGCCCAGAGGCAGCTACAGGAGCTGCAGCAGCGAAGCAGCCAGATCCAGCTGCTTGCTGCAGGCCCTGGAGATGCGGCGGGTCAGGGCTCTGAGGGACATCAATGTGGCCAAGACCCAGGCCCTGGAGCAGGCCCAGCAGGAGAAACAGCGCCTGCAGGGCCACCTGGAGGCCGTGTCCTTCTGTGATCGAAGGATTCGCCACCTCCTAGAGCATCTGGATGACTGGACCTTCCTCCAGGAATCACAGCAACTCGTGCCCCCAGGCCCTCTCGGGCCACTGACTCTCCCACAGTGGGACGAAGATCAGCAGCTGGGCGGCCTGAAGGAGTCACTGAGCCAGCTGTGTGCCCTCCTCCTGGAAGAGGGGGCTCACTCCGGAGTACCAACCGAAGCCGCTGACTTGGGCTCTGTGGAGTCCCCAGGTCCCCTGGCACCAGTCCTGAGCCCAGTGTGTCCACTGAGGAGGAGACTCTGGCAGAATTATCGCAACCTGACCTTCGACCCTGTCAGCGCCAACCGCCACCTCTACCTGTCCCAGCAGGACCAGCGGGTAAAGCACCTTCTAAAGCCCCGGGGCCCAGACGGGCCCGGCAGCTTCGAGCTCTGGCAGGTGCAGTGTGCCCAGAGCTTCCAGGCTGGGCAGCACTACTGGGAGGTGCGTGCGTCCAGCCACTCGGTGACGCTGGGCGTCGCCTACTCAGAACTGACGAGGCGCAGGCAGGGGCCCCACACGGACAACATCGGCCGCGGGCCCAGCTCCTGGGGGCTCTGCATTCAGGAGGACTGCACCCAGGCCTGGCACGACGGGAAGGCCCAGCGCCTCCCAGTCGTGTCGGGGCGGCTCCTGGGCGTGGATTTGAACCTGGCCTCTGGCTGCCTCACCTTCTACAGCCTGGAACCCAAGACCCAACCCCTGCACACCTTCCATGCCATCTTCACCCGGCCCCTCTACCCCATTTTCTGGCTCCTCGAGGGTCGGACCCTGACCTTGTGCCATCAGCCCGAGGCCACCCTTCCTCCAGGGCTCCAGGAAGAGGCCTCGGGGCTCAGCGGAGGAAGGCAGGGGACAAGTGCCACCCCGGTGGCCAGGTGCCACCATTCCCATGGGCCCCAGAACCGCCCCAGCTGCTCCCCTGGGGACCTGAGGCCACAGCTCTAGTGGGACCAGTTGTTGGCTGGAAGACCAGCTCAGGAGCTGGCTGGGCCACTTGGAGAGAGGTGGGAGGAAGCCTCCAAACTGGAGTTCACCTTCCCCTCCTCTCTGAAGGGGGCGAGCCTCAAGGGAGGAAGATGGGAGCCCAGTTCTAGGGCTGCCTGGACCTCAGAGACCAGCGCAGTGCCCAGGTCTTGCAGGAGCGCACGTGCAGAGCAGGACACACCATAGCGGGACAGAGTCACTTATAGGGCAACACCAGTTTACCTCCTACCAAGACAGTGTAGACCTCGGAACAGAGGATTCCTAGAGGCAGTCTTGAGAAGGTTGATTTTTATCTTCTCCCTCCTCATCTCTTTTCTATTTTCCTTCACATTTTGGTATATTTTCATCTTCTCTTTTACTTTGTACATCCTGTGCTCATATTCTATAAACAATTGTGTTTTTCTGCATCTTTTATTTAACATAAGCATTTTCCACATTGTTCAAATTTTCTCCCTGAATGACGCAACATAAATGGTCATCCTAATGACAAAGCCAAATTCTAATCAGAATTTATTTACCCATTATTGGACTTCAAAATGTTTTATTTGGGGGCTATAAAAATATGGCCGTGATGACTTTTTGGGAGGAGGCCACACCCTGCAGCATGTGGGATCTTAGTTTCCCCAACCAGGGATCAAACCCTTGCCCCCTACAGTGGAGAGTCGGAGTCTTAACCACTGGGCCAGGGAAGTCTTGAGATGACGATTTTTGAGCCGGAAGTTTTGGCCTTATTTATTACCCTGTACGTGGGCTGCATTCCCTACAGAGGAATCACTCAACAGAGACACAATGGAGACTTGAAGATTTTATTCTTATACAAGGGACCGAAATGAAGAAACCTTGCATCAGGCCAACTGACTCCTGCCCCCCAGGCCGCCAGCCAATCGTCACGGCAGAGCCTCAGCTGCCATCATTCTCCCCTCATCCCTACCCAGGTTGTGGGCATCAAGTGTAGGTGCCAGCACAGCTCCCGCTCCTTTGATTTTGGATTTTGCCATTCAGAACATGTTTCCCTGCAGGTCCTTGTACATGTTTTATCTTGTGTTTCTGGAGATGAGGGTGCTGGGTCATTGGGGAGCAGTAATTTTGTACAAGAAAGTGCTTCTTGATCAGGGTAGTGGTCCCAAGGGTGTCTGCTTTCTAATTTTTTACACTGTACATGCATGTTTTATAGACTCGTGTGTATTTGACAATAAAAACTTTTTTAGAAAAGAATAACATGCAAAAACACTCCAAAAATTAGAAAATATTTTTGTATTTCTATAAGACAGATTTCCC EMBV3_32072 GAGTGGGAATCAGCAATTTTGCACAGAAAGCTTTGGGAGATGTTTACTGTAGTCTGCCTG Gene GeneID:787129|LOC787129:XM_002699893:159_cdna Constitutive 0 NULL GeneID:787129 X GENE LOC787129 NULL similar to Glycine cleavage system H protein, mitochondrial EMBV3_07043 GTGGAGAAGGGTATATGACTCACTCCGTCTTGTGGTTGAGGGTATGTTTGGAAGTTGCTG Gene BVT0102_043790 + 0 NULL GK000019.2:28800881-28873594 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099483 1 XLOC_059726 NonCoding TCONS_00099483 XLOC_059726 NonCoding NonCoding - 19:28812752-28813560 - TSS73859 808 1 TCONS_00099483_1 33 0.320544554455446 1 0 0 0 2.29060272728737e-05 0 0 0 0 0 0.00032224516494599 0 0 0 0 0 0 0 0 0 0 8.90028421437402e-06 0 0 0 0 0.000540215227345553 8.71964769330025e-05 7.25142335168415e-06 0 0 0 XM_005226117.1 HOOK3 PREDICTED: Bos taurus hook homolog 3 (Drosophila) (HOOK3), 7e-08 62.6 80.26 0.0915841584158416 0 noncoding CTCATGGCATCTGTCATTACTGCCTGGGACTGCGGCCAATTGGTCATCACTTGTCCTTGATTCAGTTATCCCCTACTCCCTCGGCAACTATTTTATGATCACCTAATAATAATAGCAAACAACTGTTTAGTACTGATTGTCTTCCAGACACTGTGCCAGATGCCTTACATGTGTCATCTCGAGTCATCCTTCCAACACTCCTGTGAAGTATTACCATAGACCAAGTAGGTCAACCACAAGAGAGATGTATGGAAAAATGTAAAAGCCTGGCTATAATGAAGCGGGACTTCTTTCTGAGTCTCCTGCCCCCTCCACTCACATGTGATGGGGTGGAATGAACTAAATGGCTCATCCAATTGAAATCTCTATCTGATCTTTTTATTATTATTAATTTGGCCATGCCACTGTGTCACGTGAGGTCTTAGTTCCCAACTGGGGATCGAACTCACTGCCCCTGTATTGGAAGTGTGGGACCTGGACTACAGGGGAAGTCCCCTTATCTGATTATTTAAATAGTCCTTTTAGGTAATGCTCAGTCTCTCAGACCACCTGCTTCCCCAGTTCCTGCTGCATCTCTTTCTTTTTTTTTTTTTCTTAGCCCCTCCCCCTGCTCCTGCCTCCTCCCCCTAGTCCCTCCCTCTCTGCATCTCTTTCTTTCTTTCTCCCTCCATCTTCCTCCATCTTCCTCCATCTTCCTAATTGTGTTGGGATATGTGGAGAAGGGTATATGACTCACTCCGTCTTGTGGTTGAGGGTAAGTTTGGAAGTTGCTGATTTACTTTCCTCTGGTCTCTGAGGAATGCCCATG TCONS_00096242 . 5' 11462 TCONS_00096242 . 5' 11462 EMBV3_17929 GTATAAACATCGCTGCACTGTGACTGGTGGGAAAAACTGACCGTTTCCTGTTTGCACATG Gene BVT0102_322048 + 0 NULL GK000019.2:8720658-8783294 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092117 TCONS_00092108 TCONS_00092115 TCONS_00092118 TCONS_00092116 TCONS_00092119 TCONS_00092114 1 XLOC_056816 Coding TCONS_00092119 XLOC_056816 Coding Coding MSI2 19:8641589-8728213 j TSS69415 5831 1 TCONS_00092119_2 150 8 0.932777668748485 0.000150061204083952 1.92691931397428e-08 5.67198674998725e-15 1.54952715033443e-07 9.68249826351286e-05 1.15430869469911e-06 1.01442548200849e-05 5.48541922931519e-09 6.98301039375057e-09 3.21772232778228e-14 7.26298075639832e-06 2.33168184342778e-13 3.01298771508374e-17 1.22122224491991e-19 1.97738648836162e-09 6.48736262450917e-05 0.000135349755542902 1.18760858814759e-11 4.21224712410528e-16 1.00709386042492e-15 3.57973433631027e-17 0.000788207046587767 0.000186958243610503 0.000828468618832479 2.49734555571184e-11 1.0946562345029e-09 2.39050553218332e-19 1.68808659914012e-05 2.91637060229523e-05 1.38999448314763e-05 XM_005219877.1 MSI2 PREDICTED: Bos taurus musashi homolog 2 (Drosophila) (MSI2), 0.0 9288 100.00 0.883038929857657 XM_005257017.1 MSI2 PREDICTED: Homo sapiens musashi RNA-binding protein 2 (MSI2), 0.0 7827 90.64 0.980106328245584 TCONS_00092119_2 sp|Q96DH6|MSI2H_HUMAN MSI2H_HUMAN RNA-binding protein Musashi homolog 2; 1e-100 296 99.33 0.993333333333333 0 coding 0 0 1 1 -0.0603605545431062 0.597006325423057 0.026844755522033 0.58090922310146 GCGGGGATACAGAGACGCGTGTCGATTTGCACCGATCCCGGCTCTGTGTGTGCGCCAGCCACTTGTAATTCCCCACAGTCCCAGCCAGCTCTGCACGGCAGCAAGAAATATGACCAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGACGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAATAAAATGGTAGAATGTAAGAAAGCTCAGCCGAAGGAAGTCATGTTCCCACCTGGGACGAGAGGCCGGGCCCGGGGACTGCCTTACACCATGGACGCTTTCATGCTTGGCATGGGGATGCTGGGCTACCCCAACTTTGTGGCAACCTATGGCCGCGGCTACCCCGGATTTGCTCCTAGCTATGGCTATCAGTTCCCAGGCTTCCCGGCAGCGGCTTACGGACCGGTGGCGGCGGCGGCGGTGGCGGCGGCGCGCGGCTCAGGCTCCAACCCGGCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCCGTCGCCGACCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAATTACATAAGCGCCACCAGCCCTCAGCCGGGCTCAGGCTTCGGCCACGGCATCGCCGGACCTTTGATTGCAACGGCCTTTACAAATGGATACCACTGAGCAGGTGCTTCCGTTGCCACCCCACTCTGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTATTTAGGTGATGTCATCAGACCTGTTCCCCCACCAGCCTCACTCCCCGTCCCAACCAGAGATGGCTCACTTCGGATCGAGGGTTGACTGCATCTCATCATCTCACGAATCTGCTGTAATATAAGACAACAGCTTTTAAATGTGTATATATCCCATGATTTTGGTTTTGTTTTGTTTTTGTTTTTCTTGATGGTTTCCCTCCCTCTTCTCTCTTCCCTCTTCTCCTTTTAAATCTCTTTGAATCACATTTGGTAGTGATTTTGACTTAGTCCAGTAGTCATATAGCTTTAATATCTAGTTAAAAGCTAACCATAGTATAATTGTTATATTAAGGTATTATTTTTTTCTTAAAAGAATTTTTTTTTTGGCTTGTTTAATTCTGTTCTCACTTTTCAAGGATGCTGAGATGGTAATATTACTCTGAATATTTTGGTATCAATTCTGAGACTGTATGAATTTTCAGGCAGAATTTGAGCACACACAGAGAAGCGAGGTTGTGAAGTGCCGAGCGGGAGGTGGGCATCAACTTTCTACTCTGCATTGTATAAGAAGTGAGATGGATGTAGTAGGCTAATGAACAGACTCTCTAGCGGTTCTTTTTTTGTGGCGTCTCTTTGTTAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGACAATGTTTTGCGTGTCCTCCTTTTCTATAAGTGCTTTTTTTCTGTTGAAAGAGGTGATATTATAAGGTTTTTTGCAATTGTGAATTCTAAAAAAGAAATGTTGTAAATACAATTCCATTAACTACATAGAAACTATTAAGAAAGAGAGAATCAAAAATATTTTTGTGAGGGAGTCGGTCCCAGGCAGTTTGATGCTCTGTGGGTGGAGGAGGGGAGGAATGGTAACCGAGTCAGTGACTGAGACGGATGAACACCCAGCTGCCAGGCCGACCCCAGGACAGGTTAGAACACTGTTTAGCTCCTCTTGTCTGTGTGATAGACCTAAGAACTGTATTAGTGTCATACCAGCATATTAACCTCTCGTCTGTGCACAGCTTCCAACGTTACCGTCTAGTTAGATTTTTATTTAAAATATGAAAAACTGCTTTTCCCAAGACGTTTTTTAAAAACAAAGCTACAATTTTAATATTTAACATATTTAATGTTTCAAAGCACACCAGGTTTGGCTTGGGTGGGGAGGGGTGGGGGGACATTCTTTTTCAGTCTTAATTTTTAAATATTTGATCATTTTCTATTGTCCAATCATTTCAGCACCTCCAAAGGTCCCTAGGACACTTTGCCTCTCTCCTCCCCCTGTCCCCCCAGCCGCCCCCCAGCTCCGGGGACCCATGGGCCAGGAGTGGATAAGCCTGCATTAATGAAATCTTTTCTCCATTCACTTTCTATTTACCAATTAGGAAAGCAACCTTTTGGTTTATATATTTTTTTTAATACCTCAGTGCTGCAAGTATCACCAGAGAGGCTATGAAAGAATTTTTTTTTTAATTTATTGTAGATGTAAACAGAATTTTAAAAAGTAAAAAGTATAAACATCGCTGCACTGTGACTGGTGGGAAAAACTGACCGTTTCCTGTTTGCACATGTTTAACATTTGGCTGTTATAATATATGGTCCTCGGTTGGGGAAAGATACTTATGATGAAGGATATTTTTTAATTTAACTTTTTTTTAATATTGGTAATAGGTCGGCAACAGCAACTATAGAAGTACAACTCAATAGATGGCATTAAAACATATTGTAGTGTGGATATATATTTTTTTCTTTTTTAAAATGTGATATTGACGTTTTATTAATATTTTTTAAATTGTTACGTTTATAAATTTGGTACTTAAGGCACAGCCAGTATGAGACACTGAATGCGACATTTATTATAAAGAGCTGCTGCACTCCTATTTTTATAAATTTTACTAACAAAGTAGACTAATGTAGACATTCACAGACATGGTAGGGTAAAAGCATCTTCAAGCAAAAGGCTCCAAAATGCTAACTCAGAAAGAAAGAAAAAAAGCCTTTTTCAATTCTAATTAAACAGCAACATCTTTTTTTTTTTTTTTTAAATCATGTTCTTTGTTTTTTCCAATAAAATGTTAGGTTGTTTGGTGAAGGTTTGTTTTTTTGTTTGTTTTTCTTTCTTTCTTTTTTTATTTCCAAACAACCAGGTTAAGTAAAATGCTGGGCGCTTTTAAAATATCAAAACTTGTTCAAGTAATAAAATAACAAAATAGAAGTTTTATTTAAAAAAAAAGAAAAAAAAAAGAGACAATAAATTCCCAGAAATTCAGTGTCTAGACTAGGGAATTTAATTACTATTTTGTCCATGTTGGTGATGTACTGTACTAGCCTTCCTTTCTCTGCATCCCCCATCACCTCATAGAAGACTCTTTGTTGATCATTGTCTGTTAATACTGTATAAAATGGCTATCTTGTAAGCGTGCTGTCCTGGTACTAGTGTAGTGACTTTTTTTCTCCTCTTTCTTCTAGTACATATTGATAGGTATAACGTAATTAAGGTTTAAAAAAATTAGACATAGTTATTCAGATTTAGGACCAGTAAGGATAGAACTTTCTCTTATTTATGAAAAAAAAAAATGCTAATAATTTTGGGGCAGTTTTTTCCTTTCATTTTTTTTTTTCAATTTCAAGTTTTCATTTTATTTTTGCTGATCTGATGTGGTTTCAACTAACCCAAGGTCTCACGATGTTCAGATGCCGGTAGACTCTACGGCGTTTTGTAGATTCCCACCCCACCCCCCCCAGCTGTGAAGGGGTGTGCCATACTACCTTAAATGCTAATGCTAGATATGCAAAACTGGATTTTTTTAATTTATTTTTTAAAAGAGGGAGGCATGGTATATTAAAATGATTTTACTAAGAGAAAAAAATATTTTTTTAAGAATGCTCAGAAGAAATTGATAATCTGTGTGAATATGTTTTAGATGTTTATAATACCTTTTGAAGAGACCCAGTAGCCCATAGCACAAATCTCGTGGAAATCTGATATGTTTTAATGTGGCTACCTAGGTTAAGGTTCACATTAGTCCCCCACTCATCTAGAAGTCCATTTTGAAAGATTTTTGTAAATTATTTTAGCACTGATGTTCAGCCTTGTCTTTGTGTCAGTTAAGCTCAATGGCGAACATGGGAACCACCTTCCGCCTTCCCTGGGGGAGAAACCCTCTTGGCTGATGGCTTTTCCCCGGAATCATAAAGCAGCCACCGGGTGACTCTCTGGCTTCTAGATCCATCTGCCTGGGGCCCCCAGACTCCTCTCCTCCCACTCGGGGGAGAGTGGGCACATAAGCTCCTGGACCGATTCCTGGTTCTCCCTGGACGTGGAGCTGACGGGGATGACCGAGTTCTGGGTCTCCTCTCCAGGAGCTTGCACCCCTGGTCTGTGGCCTTCCTCACACCCACTGGGAAAACCAGACAGCCTCACTCTATCCCAGTCGTTCATGGGCTTGATTCAAACGAAGTCCCAACAGGCCTTTGCGTTTCTCTCCTTCATAACCTTCATCTTAATTTGAACTCGTAGCTTGGACTTTAAGGTAGCATGGCTCTATTGCTGTCAATTTAATGTTTCACTGCACAGCAATTCACAGCCAGTGAATGTTACACACATCTTGCTAGACTAGTATAAAAATCATTGGGTAATTGTTGGTTCTAATGACCTGAAAGGTGTTCAGTTTTTGTTTTCAATTTTGTTTTGGTTTTGTTTCTTGGTTTTTTCTTTTTTTTTTTTTTTGTTTCTTTTTCATTTGGGGATTTTGGGAAAAAAAAAAAAATTTTTTTTTTTTTTGGTTCCAAGTAGAAAAACAAAACCTATTTTGATCTTTAGTGCAAACGAGGGCTAGGGACTTAGCCACCACCACCCACCCACACTGCTTCATTCTGCCATTCACTCACTGCAGCATAATCAAGAATAAAGCAATATAGTTTACTACATTTTTTTAATTGAAGGTCAGCCATGCTTTCTGTATTATATTGCATATGAAATTGTTTACAAAAGAAACACTAACTCATACTTCTCTCTATTGGTTGGGAGTGGCTCACAGGGACAAAAGGAGGCTGGGGAGTTGGGTGGGGAGGGAAGAATGTTTTTCTTTCTTGAATGTGCTTTGCAAACCAGGCTATCTTCCAAGGAAGGCTGAAGCAGGGTTGGGGGTTGAGGGCGGGGGCAGAGGGACAGATGCAGGCAAGCACATGGAAGAGAGACACTGGCAGGCTCCCCCCACCCCTCTCCACCCGGCCCCCCACTCCAAACAAAAAGAAGCAGAAGTCAGCTCAGCCCCGTCCTGAGCACAGACACTACCCAAGGAGACGCTGTACGTTAAGCAATACTTTAATACCGTAATGTTTGTTTTCTTTCTTTTTTTTAACCAAAAAAAAAAAAAGTAAATAAACTAAAACAAAAATATATACATAAAAACCCACCCCTCTGGGGAAGCAACCTGAATCCAAACACTTGGCTATCAAATAATCAGAATGTATTGTCTCAGATAGGAGTTTGTTCCTAGGAGGCAGGGGCACGTGGGGGGCTGGGGATGGAGACTGAGAGACAAAAGTTTCCAGAGCCTTCCAGAAGGCTCTCTGCTACTGTATTCTGTACATACTGTACCATCCTCTGTGGAATCTGTGAGTGTCCTTTGAGTAGCGTGGGCTAGCCAATCTGCCGTTCATGGTGTGTTGTAAACTCGGAATTCCATATGTAATAGGATGCAAGTCTAAGCGTTTCATGTGGACATCAATGTATCTAAATAAAACTTTCCCTAGCACTGTGGCTGACCTCACCCTTACTTTTATACTTTAGTATGAAACTGATGACAACTTTGGTAGTGAGTATTTTTTTTATATATATACATATATATGTATCTATATATATATATATCTCAAGCATCTTTCAGGTCTTTGTGTGTGGCTTTCTTAAAGCCCTGTTGTAAAAAATTACTATGTGGATGGCAGTCTCTCACATCACAGATGTGGAAAGTATAATTTTATATTTGTATTTTCAAATAAATAAGTTTGTGAAAGGTTTCCATCCTCTACTGTGGTCCAGAAATCAATGTGTTTGTCTGACAAAAATAAAATAAAATAAACTGTTTT EMBV3_00975 TCGAGAAGCTGACCCAGGACCAGGACGTGGATGTCAAGTACTTCGCCCAGGAGGCTCTGA Gene GeneID:535321|PPP2R1A:NM_001037477:187_cdna Constitutive 1 NULL GeneID:535321 18 GENE PPP2R1A MGC128399 protein phosphatase 2 (formerly 2A), regulatory subunit A, alpha isoform EMBV3_36375 CATGAATCCTTCCTCTACAAAGGTCTCCTGGGCCACCGTGACGCTGCTGCTCCTGCTACT Gene GeneID:281222|HCRT:NM_001166520:21_cdna Constitutive 0 NULL GeneID:281222 19 GENE HCRT NULL hypocretin (orexin) neuropeptide precursor EMBV3_23048 GCTGTCTTCAGGATTGAGGACGAGCAGCTGAAGGTGTGGGATGTGATTGGCCGAAGCCTG Variant GeneID:515022|CCS:NM_001046187:6_cdna 645^715 3 EMBV3_00229 GeneID:515022 29 GENE CCS MGC137566 copper chaperone for superoxide dismutase EMBV3_05557 AGCATATTCACCTGTCACCCAGCCACCATTGGGCATTGGACAAGTTGTTACTGACTATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30946 CTGTGGGGCTGACCTTGATTCAGGTTTAGCAGTGAGCACTTAGTGACTCTTTGGAAGTCC Gene BVT0102_210252 + 0 NULL GK000004.2:48369478-48435187 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181512 TCONS_00181513 1 XLOC_110626 Coding TCONS_00181512 XLOC_110626 NonCoding Coding - 4:48367683-48382109 - TSS135833 647 1 TCONS_00181512_1 35 0.234930448222566 4 0.955424610051993 0.000100703612410728 0.000201591876046837 1.84651962466807e-22 8.98391972886449e-05 5.32593594433959e-12 0.00015496697008677 0 0.000150778344634324 1.17027107850924e-12 0 0 0 4.75715170899132e-23 0 2.29828619159233e-69 0 0 2.23983901423932e-43 0.000451537094125311 0.000942140773839739 5.36013606616328e-15 0 0 0 3.76958725513727e-08 0.000158978190950707 0.000215278828724048 0 0 0 0 noncoding 0 0 0 0 0.530513239258396 0.147154508408825 0.0898193813530063 0.128010892621473 GAACTGAGCCTCCCTCCTGCTCCAAGAGACAATTTCTGCCCTTCAGGTTGTGCGGTCCCAGCTGAGGCAGGGAAAGCATCGGTACACTTGTTCAAAGAGCATGAGTGCCTGAGTGGCACTGTGTGAAAAGAAGCTGATAAAATGTTGATGGTGATGCTCTGGAGGAAAGCCGCAAGGCCTGAAGGTATCTTGGCCTTGGTTCTCTGAAAAATGAAGACTTTGGAACTGAAGCCAGGTACCATCTGGGAAGTATGACCACCGTTGAGCCCACCATGCTGTGAGAAGCCTAAGCTATGTGGAGATGGGGGTCGAGGAGCACTGTCATGCCAAACATGTGAATACAGATGCCATCTTGGAAGATGCCCAGTGGAAGCTCCAGATTCCCTAGAGGATGCCATGTAGATCCTAGACAAATTGCCCAGCACAATAAAAAGATTGTTTTAAGTCACTAAGGTTTTGGGGGGGAAGGGTAGTTTTACACAGTGGTAGATAATCAGAACAGTATACAGAAGCACGTGCTAAATACTTGACTGTGGGGCTGACCTTGATTCAGGTTTAGCAGTGAGCACTTAGTGACTCTTTGGAAGTCCTCCAAAGATGATACCCTGGATGAAAGATATCATACTCTGATAAAGAAGCACATACAT TCONS_00181515 TCONS_00181515 s 5' 0 TCONS_00181515 s 5' 123 EMBV3_14029 GAGGGGGGCTGGGAAGCCCTGGAAAAAACATGGCAACAGAAATAAAAAAGAGAAAAGCCG Gene GeneID:505082|LSG1:NM_001045910:54_cdna Constitutive 0 NULL GeneID:505082 1 GENE LSG1 MGC133940 large subunit GTPase 1 homolog (S. cerevisiae) EMBV3_32526 ACTGGCGAGAAGAAGGTTAAAAAGAGGCTCAGCAGAGGCAGTTGACGGTGATGAACGGCT Gene GeneID:504404|BEND7:XM_002692078:210_cdna Constitutive 1 NULL GeneID:504404 13 GENE BEND7 NULL BEN domain containing 7 EMBV3_22185 CAGAATTCCAGCCCATCTTGCCACATTGGTTGCCAAACAGGCACATAGACCCGATGGTCT Gene BVV0102_111730 + 0 NULL GK000025.2:35109900-35114123 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25938 CAAATCTGACTGACTACTTATAACTCAAATTTGCTATGACAAATACATTAGAGATGACTG Gene GeneID:100124506|LOC100124506:NM_001102547:15_cdna Constitutive 1 NULL GeneID:100124506 X GENE LOC100124506 MGC165729 hypothetical protein LOC100124506 EMBV3_10825 GGCCTTTGGAACTTTCCGTTTGGAACTATTAGACAGGAATCACAGCCTCCAATGCATGCC Gene GeneID:532455|STK24:XR_082706:59_cdna Constitutive 0 NULL GeneID:532455 12 GENE STK24 STK24-LIKE serine/threonine kinase 24 (STE20 homolog, yeast) EMBV3_25443 CTTGCACACCCCCTCTCCCACCCCGCATAGCTCCCTGTTTAACTTTTGTAAATGGTGAGA Gene GeneID:617924|BAIAP2L2:NM_001035498:106_cdna Constitutive 0 NULL GeneID:617924 5 GENE BAIAP2L2 MGC127605 BAI1-associated protein 2-like 2 EMBV3_09623 CACCAGCATGAACTAGAGCAGAGGACGAAGAAAACCTAACGCAAAAGCTCTTCCTCAGTG Gene GeneID:535781|LOC535781:XR_084655:96_cdna Constitutive 0 NULL GeneID:535781 26 PSEUDO LOC535781 NULL similar to CTCL tumor antigen L14-2 EMBV3_29286 GCTGGGCAGCTTTCTTATGCCATTTTCACACTGTGCTTCATGAGTAGGACTTTCTTGCAC Gene BVV0102_352462 + 0 NULL GK000030.2:85899455-86163689 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27132 CCTAGAAATCAATGATTCAAAACTCATTTCACAAGATTCAGATGAAGAGATATTTGTGAG Variant GeneID:508363|CLSPN:XM_002686477:539_cdna 60^128 1 EMBV3_32724 GeneID:508363 3 GENE CLSPN NULL claspin homolog (Xenopus laevis) EMBV3_35019 TTCTCGAATTACGACGGGGAATTCAGGATGCCTCTTGTGTAGGCCCAGGGAAGTCCAATC Gene BVV0101_004669 + 0 NULL GK000016.2:38586029-38902322 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178735 TCONS_00073626 TCONS_00240375 TCONS_00098202 TCONS_00117596 TCONS_00207545 TCONS_00162301 TCONS_00230834 TCONS_00088420 TCONS_00185575 TCONS_00158397 TCONS_00206815 TCONS_00098199 TCONS_00240374 TCONS_00201119 TCONS_00098198 TCONS_00218951 TCONS_00185573 TCONS_00222179 TCONS_00088422 TCONS_00106013 TCONS_00238290 TCONS_00080098 TCONS_00106012 TCONS_00185604 TCONS_00107098 TCONS_00240373 TCONS_00217532 TCONS_00207410 TCONS_00056187 TCONS_00178734 TCONS_00220551 TCONS_00162571 TCONS_00189710 TCONS_00222177 TCONS_00142474 TCONS_00054133 TCONS_00142473 TCONS_00142472 TCONS_00231774 TCONS_00157807 TCONS_00011613 TCONS_00066112 TCONS_00230353 TCONS_00176791 TCONS_00167922 TCONS_00238284 TCONS_00230829 TCONS_00186489 TCONS_00157808 TCONS_00222180 TCONS_00185581 TCONS_00054140 TCONS_00178886 TCONS_00106011 TCONS_00106016 TCONS_00098201 TCONS_00158314 TCONS_00186834 TCONS_00071397 TCONS_00154284 TCONS_00012044 TCONS_00201121 TCONS_00111146 TCONS_00212984 TCONS_00222175 63 XLOC_108508 XLOC_045388 XLOC_147039 XLOC_058448 XLOC_071762 XLOC_126060 XLOC_099183 XLOC_140324 XLOC_053207 XLOC_111628 XLOC_096851 XLOC_125335 XLOC_058445 XLOC_147038 XLOC_122767 XLOC_058444 XLOC_132270 XLOC_111626 XLOC_135488 XLOC_053209 XLOC_062697 XLOC_144957 XLOC_048982 XLOC_111657 XLOC_063009 XLOC_147037 XLOC_131531 XLOC_125926 XLOC_033990 XLOC_108507 XLOC_133868 XLOC_099452 XLOC_115748 XLOC_135486 XLOC_086899 XLOC_031942 XLOC_086898 XLOC_086897 XLOC_141262 XLOC_096262 XLOC_007164 XLOC_040830 XLOC_139843 XLOC_106565 XLOC_102758 XLOC_144951 XLOC_140319 XLOC_112541 XLOC_096263 XLOC_135489 XLOC_111634 XLOC_031949 XLOC_108659 XLOC_058447 XLOC_096768 XLOC_112885 XLOC_043168 XLOC_094044 XLOC_007594 XLOC_122769 XLOC_067046 XLOC_130301 XLOC_135484 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_00560 TTCTGATCTTGAATGCTGCCAGTGTGAAGTGAGCAACCTGGGCACAGCTGAGTGAGATTG Gene GeneID:511754|CDK6:XM_002686654:83_cdna Constitutive 0 NULL GeneID:511754 4 GENE CDK6 NULL cyclin-dependent kinase 6 EMBV3_16550 TCTCCTTCTTGGCAGAATGGCTGACTGAGAAAACTACACACACCAGGCTCCTAACCCTGC Gene GeneID:510652|TNFAIP8L2:NM_001034389:82_cdna Constitutive 0 NULL GeneID:510652 3 GENE TNFAIP8L2 MGC128716 tumor necrosis factor, alpha-induced protein 8-like 2 EMBV3_36354 CAGTAGGGATGAGTTCACCAACACCTGCCCCAGTGATAAGGAGGTTGAAATAGCATACAG Gene GeneID:286823|CLIC4:NM_001080218:39_cdna Constitutive 1 NULL GeneID:286823 2 GENE CLIC4 p64H1 chloride intracellular channel 4 EMBV3_18536 TGGTGAGGGGCGGCTGGCTGTGGAGACAGAATGTGCAGCCCCCAGAAGGCCGGAGCCGAG Variant GeneID:511885|PLEKHB1:NM_001113280:4_cdna 197^349 5 EMBV3_03772 GeneID:511885 15 GENE PLEKHB1 MGC128483 pleckstrin homology domain containing, family B (evectins) member 1 EMBV3_42142 TCCATCTTGGTCGGGGCTGTGTGCTGCGAACTGGGAATCGTTGGCTTCATTGAAAAGATT Gene BVT0102_149908 + 0 NULL GK000025.2:14118330-14138501 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146345 TCONS_00146346 TCONS_00146348 TCONS_00146352 TCONS_00146350 TCONS_00146349 TCONS_00146347 TCONS_00146351 1 XLOC_089078 Coding TCONS_00146352 XLOC_089078 Coding Coding KIAA0430 25:14136371-14175801 = TSS109442 7679 1 TCONS_00146352_9 1741 27 0.805929645692257 3.84504290059338e-57 2.41348310873245e-87 4.5424925068045e-39 3.36426723625944e-45 2.21930836528898e-69 1.75861846063845e-29 1.45314430672849e-74 3.68772151366801e-154 1.70914640228945e-31 0.000615387280335898 0.000439883030901172 7.75375982674535e-08 1.57321808041225e-26 1.7629593184691e-54 2.73216953764385e-34 0.00473716886264318 0.00135168949353507 1.0724391125092e-11 1.852338024581e-33 1.07867983496344e-48 2.2074301449594e-229 0.00216820502711477 0.00134339510048683 0.00301540399285942 1.91057542169675e-26 3.71011624596846e-21 8.76969756993137e-55 0.000790787642006661 0.000811276429412836 0.00150840198556992 NM_001271994.1 MARF1 Bos taurus KIAA0430 (MARF1), mRNA. 0.0 1.383e+04 99.96 0.999869774710249 XM_005255706.1 KIAA0430 PREDICTED: Homo sapiens KIAA0430 (KIAA0430), transcript variant X3, 0.0 8873 85.63 0.999479098840995 TCONS_00146352_9 sp|E1BP74|MARF1_BOVIN MARF1_BOVIN Meiosis arrest female protein 1; 0.0 3534 99.89 0.998851234922458 5 coding 0 0 0 0 0.0180005310732284 0.884123715525098 0.0137195110724006 0.807361182659438 GCCGGAATGTGAGCGGAGGTGGGGCCGGCGGCAGAGGGTGGAAGAATGAAAGAAAAGAAAGATGAAAGAATGTTGAACCGCTCCGCATGGCTGTATGATGGAAGGAAGCGGAACTGAGAACCCCTGCAGTACAACAGTTGGGTGGCTTCAACAAGATAACGATGCTAAGCCATGGCTTTGGAGATTCTCTAACTGCTTTTCTCGTCCTCAGCAAACGTTGCCACTTAGTCCCCAAACGAAAGATTACATGGAGAACAAGAAAGTTGCTGTGGAACTAAAGGATGTACCATCTCCCCTTCATGCTGGCTCTAAACTTTTCCCAGCAGTCCCACTTCCAGATATCCACTCTCTTCAGCAACCTAAAGTACAGCTTTCAACTGTCCCCAAAGTAAGCTGCTGTGCCCATTGCACTAATGACCCTTCCACTTCGCCAGTGCGTTTTGGTGGTGGCAGTGGCGGAGGGGCTGGTAGCTTGGTTCCCCCGGGCGCCCTGTTAGACTCGCAGAGCACCAGGACAATCACGTGTCAGGTAGGGTCAGGGCTTGCTTTCCAGTCTGCACCTCCACTCCAGAATGCGTCAGCTAGGAACACCTTGGCCGGCGTTGCAAGCGACTTTCCCAGCATGTGTCTAGAAAGTAACCTCTCTTCCTGCAAGCACCTGCCCTGTTGTGGGAAGCTGCACTTCCAGTCGTGCCGTGGGAACGTGCACAAGCTGCATCAGTTTCCGGCTCTCCAGGGCTGTCCTTCCTCTGCGGGCTATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCCGGGCACGTGGAAGAACACGTTTCACAGTCGGAGCTCACGCCTCACTTATGCACCAACTCTTTGCACCTAAATGTGGTACCTCCAGTTTGTTTAAAGGGCTCACTTTACTGCGAAGACTGTCTCAGCAAGCCAGCAAGAAATAGTATAATTGATGCTGCTAAAGTCTGGCCAAATATACCACCTCCAAACACTCAGACTGCACCTGTTACTGTTCCTCTGTGTAATGGCTGTGGAACCAAAGGAATGGGAAAGGAGACCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTGCTTCGAAATTTGGGTCACCAGAAGTTGCACTGGCAGGACAGATGCTAGAGAACTTACCCCCCATTGGGGTTTTTTGGGATATTGAAAACTGCTCAGTCCCTTCTGGCCGCTCAGCTACTGCAGTTGTACAGAGAATCCGGGAGAAGTTTTTTAAAGGCCACAGAGAAGCAGAATTCATTTGTGTATGTGACATCAGTAAAGAAAATAAAGAAGTTATTCAAGAGCTGAATAATTGCCAGGTAACTGTCGCCCACATCAATGCTACTGCAAAGAACGCTGCTGACGACAAGCTCCGCCAGAGCCTCCGAAGGTTTGCAAATACTCACACTGCTCCCGCCACTGTGGTTCTTGTGTCAACTGATGTCAATTTCGCATTGGAACTTAGTGACCTGAGACACAGACATGGCTTCCATATAATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACTGCTGCATCACGCCAACGAGCTGATCAGATTTGAAGAATTCATTTCTGACCTGCCCCCCAGGTTACCACTAAAAATGCCATGCCACACTCTGCTCTACGTTTATAACCTACCGGCCAACAAAGACGGCAAGAGCATCAGCAACAGGCTCAGACGCCTGTCCGATAACTGTGGCGGGAAAGTGCTGAACATCACAGGCTGCAGCGCCATCCTCCGCTTCATAAACCGAGACAGCGCAGAGCGGGCTCTGAAGCGGATGGAAAATGAAGACGTCTTTGGTAACAGGATCGTTGTGTCATTTACTCCAAAAAGCAGCGAACTCTGTGAAACCAAGAGTTCAAACGCAACTGCTGATAAAGTGAAGTCTCCCAAGAAACTTAAGAATCCAAAACTGTGCCTCATCAAAGACATAAGTGAGTCACCTTCCAGTGCCAAAGCCGCACCTGGAAAAGGGTCGCAGGCAAATTCTGGATCTGCTACCAGAAACGCCAACGTGAAAAGTTTACAGGAGCTGTGCCGCCTGGAGTCGAAGACTGGCACTCGAAGCAGTGAGCCCCAGCAAGGCCACCTGCGGCTGGGGGCGCCTCCTCACAGAAGCTCAAGTGCCGCAGCGCCCGCACCTAAAGCCCCAGGGTTGGCAGAATCTGTTTACAAAACCAATCCCAAGAAAGAGAGCCTCGGCGCCCGCAGTGTCACCAGTTCTCCTGTGGAGAAGAAAGAGAAAGAGGAGACTCTGTTCCAAGTGAGTTACCCGTCTGCTTTTAGCAAGTTGATCGCATCCAGGCAAGTGAGTCCCCTGCTCACGGCTCAGCCTTGGTCTTCTCGGAATCTGTCTCCAAACCTCTTAAACAGAGCATCCCCGCTTGCTTTCAACGCTGCACATTCAAGCGTTGGTGCCGATGGCCCAGACCCATTCGCTCATGGTGTTGACGTCCAGATCAGCAACCTGGACTACAGGTTGTCCCGGAAGGAGCTGCAGCAGCTCATGCAGGAAGCATTTTCTAGGCACGGCAAGGTGAAGAGTGTTGAGCTCAGCCCCCACACAGATTATCAGCTCAAAGCTGTGGTTCAGATGGAGAACTTACAAGAAGCTATCGGTGCGGTGAATAGCCTCCACAGATACAAAATTGGCAGCAAGAAAATCCTGGTCTCACTTGCCACAGGAGCTGCTAATAAATCACTCTCTTTACTGAGCGCAGAAACAATGTCCATTCTTCAGGATGCTCCTGCCTGTTGTCTGCCTCTTTTTAAATTTACAGATATCTATGAAAAAAAGTTTGGACACAGGTTGAATGTGTCAGATCTGTATAAACTAACAGACACGGTTGCAATCCGTGAACAAGGAAATGGCAGGCTGGTGTGTCTCTTACCCAGCAGTCAGGCCCGCCAGAGCCCCTTGGGATCTTCCCAGTCTCACGACGGCTCCTCAACAAACTGCAGCCCAATCATATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAGGCAGCACTGTCCCAACAAGGATTTCAGTGAACATGAATTCGATCCAGACTCTTACAAGATTCCTTTTGTGATTCTCTCTCTGAAGACGTTTGCGCCCCAGGTCCATAGTCTTCTGCAGACACACGAGGGCACCGTGCCTTTATTAAGTTTTCCAGATTGTTATGCTGCAGAGTTTGGCGAACTGGAAATAGTGCAGGAAAACCGAGGCGGGGGCGTCCCCTTGGAGCACCTCATCACCTGCGTGCCAGGTGTGAACATCGCCACCGCACAGAATGGCGTCAAAGTAGTTAAGTGGATTCACAACAAGCCCCCGCCTCCAAACACAGACCCTTGGCTTCTGCGTTCTAAAAGTCCTGTGGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATCGATCTATTGAAGAACCAACCATCCTGTGTCATACCAATTAGTAACTTCATCCCCTCTTACCACCATCATTTTGCAAAGCAGTGCCGGGTATCGGACTATGGCTATTCCAAGCTGATCGAATTGTTAGAAGCAGTGCCTCATGTGTTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGAGCCCAGGTGAAGCGCTTTACTCAGGATCTACTGAAACTTCTCAAATCCCAAGCCAGCAAACAAGTCATTGTGAAAGAATTCGCACAGGCTTACCATTGGTGTTTCTCAAAGGACTGGGATGTCACTGAATATGGTGTTTGTGAGTTGATTGATATCATATCAGAGATCCCAGACACCACCATCTGCTTGTCCCAACAAGATAGCGAAGCAATGATTTGTATCCCCAGAAGAGAACGTACTCAGGATGAAATAGAAAGGACAAAACAGTTCTCCAAAGATGTTGTGGATTTGCTGCGGCATCAACCCCATTTCCGGATGCCCTTTAATAAATTTATCCCCTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCATACTATGGTTTTACCAAACTACTTGAACTTTTTGAAGCCATACCTGATATTTTACAAGTATTGGAATGTGGAGAAGAGAAGATCCTCACTTTGACAGAGGTTGAACGATTCAAAGCTCTAGCTGCCCAGTTCGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTGCTTAAGGAATATGCTAAGACTTTTGGTTACACATTTCGTCTCCAAGACTACGATGTCAGTTCAGTTTCAGCTTTAACACAGAAACTCTGCCATGTCGTAAAGGTTGCTGATATGGAATCTGGCAAACAGATTCAGCTGATCAACCGCAAGTCTCTGCGTGCTCTCACTGCCCAGCTGCTGGTGTTGTTGATGTCTTGGGAGGGAACCACCCACCTTTCTGTCGACGAGCTCAAGAGACACTATGAAAGCACACACAGCACTCCTCTCAACCCCTGTGAATATGGGTTCATGACCTTGACCGAACTTCTGAAGAGTCTGCCTTACTTAGTTGAGGTTTTTACTAATGACAAGACAGAGGAGTGTGTGAAGCTAACAAGTCTGTATTTGTTTGCCAAGAACGTTCGGTCTTTGCTTCATACTTACCACTACCAGCAGCTTTTCCTTCATGAATTTTCCATGGCCTATAGCAAGTATGTGGGAGAAACACTGCAGCCCAAGACATATGGCTTCAGTAGTGTGGAGGAGCTGTTGGGAGCCATCCCGCAGGTGGTCTGGATAAAAGGACATGGTCATAAGAGAATTGTAGTGTTAAAAAATGACATGAAAAGTCGCGTGAATTCACTCGGTCCTTCCCCTGCCAGTCACGAGACCCAGCCCTCAGCTCCCGAGCGCATCCTGGAGGTGCCTGAGTCTCCCCCGGCCTCGGAGCTCAGACTCGGAGTGGGTGGCGACGGGCCCCATCCTGCGGAGCAGGAGCTGCTGCGCCTGACCGACGACTCCCCGGTGGACCTCCTGTGCGCGCCCGTCCCCTCCTGCCTGCCGTCCCCGCAGCTGAGGCCGGATCCCGTCGTTCTCCAGGCTGCCGATCTCATCTGGTTTGAGGAGCACCCTCAGGAGCCTTCAGAAATTATGATTTTAAACCAAGAAGAGAAAATTGAAATTCCAGTACCAATAAGGAACGAAAACCTGCCCCCTGATCCCAGCTCACCTGGTGTCTCGGCAGCTGTCCCGGCGCCTCCCAGCCCCTCCTCAGAAACCCCAGAGTCGCTGCTCAGCAAGGACCCCACGGAAAGCCCAGCCAAAAAGCAACCCAAAAATAGAGTAAAATTGGCAGCCAACTTTTCCTTTGCACCTATAACCAAGCTTTGAGTCTCGTTTGAACATAGAATTAGGATGGGAAAACGCTGTCTGATTCTGCACACAAAAGCAGGTTGAAAAAAACACAACCTTTTTCTGTTTTCCCCCTAGAAGCCAGTTATTTCATCTTTAAACATGTTCCGTACGTTTTGTTTCTTTTACATTGAACGCAGCTTTAAGCTGAAGTTTTTCTTTCTTTTCTTTTTCTCCCCCACTTGTTTGTGGAAAAAAAAAAAAAAAAGTCCTGGCATTTGTTAAAGAATCCTTAATATATTTTAACAAATTTTTCTTAATTATTATGAAGTATAATGAATGGTGTTCTGTAAGAAGACAGCAGGGAGAACTCAGCTCGAAGGAAGTGGTCTTAACTTCCATCAGCCAACGCCAGTGGTAAATCTTACATGTAGCATAGCGTAGTCTCTAAGCCTGTGTTTACTGATGTGTTCAGACAGTATTAATCAAATGCACGAGATGGTGATGAAGCAAAAGTCTGTTCGGTGATCCTGCGCGGTCACTCACTGAAGAAGGGTGGGCAAGGCAGGAGGAGTGTATGTCCTGGTTGGATGTGAAGGCTCCTGGCTTCCATGTGACTTGTAAGCGTGCCTTGTTTTTTTTTATTTAACTATGTCTGTAGTTGACAAATGTGGCTTCATCTCAAATTTTTTAAAATGTTTCCACTTTGGGGTTCCATTGAGCTTTCTAGAAAGTCAAAGATGTTTTAAGCTTCCCTTTTATGTTAAGTTCCAGTTTGACATGGATTAGGTTAAGGAAAAGAAGATGGTCTTGGTGTCATGAATTTAAAGTCAGCATTTGAATTCCAACACACATTATTGTGTGTCGAGAGGCAGCGTTGGGAAGAGAGTCTGATTTTCTAGAATATGCATCAAATGCATAAATTACAAATCAGAGGTGAGGAGGGAGGTGCTTTTGACAGGAACGGTATCGATGCTCTTTCCACTAGGAAGAGGCAGAAATTCTATCTATACATAGGAAGGCCAAGGTTGATCAACTTAACCTTGTATTCGTACTTTTAAAGCTGGTTTTGATGGCTGGGAAGCTTTGTATGCGTGTCTGTGTGTTTGCGTCTGTTAACTCAGTGTCTTTTAATAGCATCTGCTTTTACTGTTACTTCTCGCTGTTGGAAGCATGTTTGGGTTTGTTTGGGTTTTTTTGGTGTCTGATGTTGGCATTTATGGAAAGCCAGCCTTTGAGGGAGCACTGCCCTGTGGAGTGACCTTCGCCTTGAGGTGGCTGAGGCATCCGGTGACTGGCGGCCTCTTACGCCTCCTGGAGAAACCTGACATTTACAATGGGTTGTATTTGTTGGGCAAAAAGGCGGATTCATTCATAGAGCAGGAAAAAACCTGTTGGCATAAGGTCTTCCACTAGTTAGGTGGTTTCTTTTGGGGAAATGATTCTATTTTGTAACTTCTAGAAAGCCAGAAAATGGGCTCTGATTTCATAGCCAGCATTTTGATAAAATGCCACAAAATAAGGGCTATTGAGAGATTTTTTACAAGTAAGATTTTTTGTTCCCCAAATCTTTTCAATGAAGCCAACGATTCCCAGTTCGCAGCACACAGCCCCGACCAAGATGGAGCGGCCCTGGGAAAGCCTTGTAGGCGTCGTGGCACTCAGTCTTCCCGAAGGCATGCCCTCTACAGACATAGTGTGACAGTCAGTAAAATGCAGAGGTGCACTTTTTTTTAGAAAGCTTTTAAACATTATGATAAAGATGGTGTTGAGAACATCAGTGGCCTTATTCTAAGATTTCGTAAGGCTGAATTTGCACATGTGGACTTTAGTTTTGCTTGAAGGTAGAGAAAGTGGACTTTAAAAAAATGCCCGAGGCACCATTACAAGTCACTTGGAAAAGCCTCAAAGAGCAGCTTCTTTGGGCACCAAAGAAGAGACTGGAGTTGTGTGCTGTCATGTGGGTGAGGTCGAACCGTTCACTGAAGTCTCCAGGAGCCTGGGACGCGTGCGTGACTCTTAACAGTCACCGTTTGAAGATGTGCAAAGCTCATGGTGTCTGTAATGTGCTCCACAATGGCCAGTCCAGTTGCTATCTATTTTTTTATCTAGAGGTGTAATTGATGTGACAGAATGACGTATGAGAATTAAGACAATGAAATACTTTATTTCTGGGTGGAAAGAATATATCAGATTTATCTGTTTCAAAAAAAAAAAAAGACAAGTTATCACCAAAACCCCCTTTCCCATCTTGCACTGTTTGTTTTGAATTGATTTTGGGGGAAGAGATGTTTTTCTCAACTGTCTACTTTGTTTGAACACTTCTTTTGTGGTTCAAGTGCTGTTTTGTGTGTTGGGACCAAACAGTTGTCAATAAACTTTAAAAGCAAGCATCACA EMBV3_41283 GCTTCCTTCTGAATCTTCCACGTCACTAACACCCATTAGCCTAGATCACAGGGAGTCTGG Gene BVT0102_238558 + 1 EMBV3_11313 GK000015.2:30811462-31213141 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058796 TCONS_00058797 1 XLOC_036200 NonCoding TCONS_00058796 XLOC_036200 NonCoding NonCoding - 15:30812618-30820457 - TSS44217 2072 2 TCONS_00058796_3 77 0.211872586872587 3 0.736029599387599 0.000479349839426764 0.000408943963787748 2.19865947633306e-09 1.27850183913091e-05 7.25966262735196e-13 1.50757034186082e-08 0.000147507667942245 4.23729777255044e-13 6.20111633343055e-07 0 0 0 2.04675654664372e-05 0.000124864018313429 3.88412889602316e-10 0.000152961489960126 0 1.2107989622447e-05 0.000643315968744512 0.000495365995559732 0.000526540074352717 0 7.08415608038755e-05 2.4272337892805e-05 0.000133106799028363 0.000292520424090332 3.60607901729016e-05 0 0 0 XM_005228472.1 MID1 PREDICTED: Bos taurus midline 1 (Opitz/BBB syndrome) (MID1), 3e-24 118 88.89 0.042953667953668 0 noncoding 0 0 0 0 -0.0442035210227358 0.771196919176283 -0.0159675982513008 0.779853222069027 AACAAAGGCCCGGGGAAGGCTAGGGCGATTTCCCTAGGGGCACAAGCAGAAAAGTGGCAGGCCTCGGAGTCGAACTCAGTAACCAGAGCTCTCACGCCTCTGCATCATGTGAACACTCTACGGGGAGGCAGCTATGCGGGGACCTCCCGGGAGTCGGTGGTGGGCGCATTCGCGGGACTCTGCCTCTGAATACTTGATTCACTCACCGTTGGACTGTCAGCTCCTCCAGGACAGGACCACGTTATAGGAGCTGGACCCCGTACGTTAAAGGGGCAATTCCAGATGGACCAATGCCCACTAGTTTCCTGCTTGTTTTCTTCCATCTCTCCATTCTTGGAGATCCCTGCAGAGCCTGTCTATTGCCACGGCCGCCATTGCTCTAGAAGACGACAGATCAGCTGAAAGCAGCTGCCCCCGGATTCCATGATCTACTGAGTCAAAGTGGTACCTCGATGGCTAACAGGCTGCTATCCTCTCGGGCCATGGTTTCCCAAAGATCTCCGTGGCTCTGGGGCTGGAGCTCTGAGTGATGACTGAAAGGCCCCAGTTCCCTCTTGAACCACCCAATTCTCTAGAAAGATGGAACTCCCGAAGGCAAATCCAAGTGCTCCTCTGAATCAGCACATCCAAAATCCTAAGGAATTCTGGATGTGACAGCAGGATCATTCCTGATTTGGGGTGGGAATACTTCAAACTCAATTGTGGTGCTGAGAAGAGAGCTTCGGTGAGGATCTGCATGGACCAAGAGACGGGAAGAGGATGGGTGAACTCCAGCCTGGAGCGTTCCTGATACAGAAAGACATGAGAGGGAAAAAGACTTACGGAAAGGAAGAAGGCACTCAACCTCCCACCCACAGTCTTTTCCCATTCGACAGTGCCTTTAGATCTGAAAAAAGAAAGTCTCAGTTGCTCAGTCATGTCCAACTTTTTGCGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTTCATAGTATTCTCTAGGCCCCTTTAGATCTGGGGTCAGGATAATTATCAGGAGGGACTACTCATTGAGAGGAACCTGTTTTTTTTTTTTTTTTTTTTGAGAGCCATATGGAAGCCAAGAAATGGAACAGAGGGAGGAGCAGAGTTCCTGGGTCAGCCCAAGCCCTGCAGAGAAAGTGCATGGTGGACACTCGCCCTGGGAGTGGATGTGAGTCTGAGTGTTCTTCTCAAGGGTGCTGATCTTTTCAGGATCAGATGAACGCTGTGTCCTTCTGCCCTGCAAACAGCACACGTGCACAAAGACGGTGTTTACATGGCAACCTGCAGAAGCCCAGCTGGGGCCCTGAGCTAGCAAGCCCTGCTGAGAAAGGGGTTTTTCAGGAAGGAGGCAGCCCTGAGCCCAGACTCCCTGTGATCTAGGCTAATGGGTGTTAGTGACGTGGAAGATTCAGAAGGAAGCAAATCTAAACACGAGTTCTGTAATGTGAAGTGAAGAAAGGAACAAACATGATGATTGCACTTTTCAGTTCTGTAAAAAATCCACACCGAGAGAGAGAAAAATGCAAAGGCAATATGGAGAAATGAAAACTTTTTTAGTGAAGTTTTTTTTATTCTAAAAATTTGCTTTAATATCATTATGAAGTTATTTTAATAATAGATTTAATTTTTTCTATGTTACATAAAGTGCTTTTCCTCCAGAAATAAGCCTCTCTCTCAATTGTATTTGATTTAGGTTAATATTAATGCCCTGCACTCCTTGAGCACCTGCTTCTGAGAAGAGGTGCTCCAGGACAGTGCCAAGTGGCTTGGAGGGGACATCCAAAGGGCAGGCCATTGAATTCTAAGGACCCTCAGGAGGCAGTCAGGGAACAGTCACGTGATTTGGAGTCAGGAGCCCTAGGTTTACATCCTAGACAAGAAGCGTGACCAGCTGTCGTGTTCTGCCTACGTACGACTGAGGGGGTCCCCAGGACACTGTCAGTGCTAAAACTAGGAGAGATCTGGGCAAACCAGAGTGAGCTGGTCCCCTGTGAATGAGGCACTTTAATCTCTCTGTGCTCAGTTTCGTCGTGTGTAAAAGGATGCTGATGACTGCCAAGACCTTTG TCONS_00060987 TCONS_00060988 r 5' 1158 TCONS_00060987 TCONS_00060988 r 5' 1158 EMBV3_26968 ATCTCTTGCTGGAGTGGTGTAATGTATCTAACTTTTAGTAAAGGAGGGTTGCAGAGCAGC Gene GeneID:781335|MAP4K5:XM_002690833:148_cdna UTR3_Alt 2 NULL GeneID:781335 10 GENE MAP4K5 NULL mitogen-activated protein kinase kinase kinase kinase 5 EMBV3_06020 TTTTTTCCCTCGCCATCCTACACAACTTGTGGGATCTTAGTTCCACCACCAGGGCTCGAA Gene BVT0102_111214 + 1 EMBV3_32252 GK000018.2:64080945-64117290 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08739 TAGGCTTTTTGAGAAGCATTGATCAATTTGGACTTAGAAAAGGAGAGTGACACACCTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02805 GGCCTGGAATGCAAAATGCCTGAAGAATACAAAGGGTGGTTTGTAGGAAAGTATGTTCGG Gene GeneID:777690|LRRC17:NM_001078150:21_cdna Constitutive 0 NULL GeneID:777690 4 GENE LRRC17 MGC137981 leucine rich repeat containing 17 EMBV3_34812 ATTGCTATCTCCAGCTTCTAAGCCCTTGCCTGGACAGCTTGCATCTCACCCATTCTGCCA Gene BVT0102_025049 + 1 EMBV3_26912 GK000010.2:44615290-44711723 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39903 CAATGGCTTCGAGACAACCAGAAGTGCCTGAAACTAAAGCTCCAGAGTGGAGAGACAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10738 CCCAGCTGCTCAGGGCTGTTCCCAGGGCAGATGCAGTGTAGAAATGTGCTCAAGATTCGC Variant GeneID:506359|AURKAIP1:NM_001075255:64_cdna 118^437 2 EMBV3_02398 GeneID:506359 16 GENE AURKAIP1 MGC142346 aurora kinase A interacting protein 1 EMBV3_41154 CTTGTTCGCACGTTGTTTAGGGTGCCCTTAGTTCAGGAAAGAAGTAGGAGTTGGAGAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27364 CAGTGCGTTTCGCTACCTCACTCGGAGCAGGTCGTTTCGGCAGCCAAGGTGTGTGGAGTG Variant GeneID:510462|OXNAD1:NM_001035090:2_cdna 168^231 2 EMBV3_27917 GeneID:510462 1 GENE OXNAD1 MGC15763 oxidoreductase NAD-binding domain containing 1 EMBV3_17406 GTAGATGAACTGGAGGACCACATCTCCCAGCTCCACGAGTATAATGACATCAAGGATGCG Gene GeneID:616324|LOC616324:XR_083805:439_cdna Constitutive 0 NULL GeneID:616324 11 PSEUDO LOC616324 NULL hypothetical LOC616324 EMBV3_10992 TACCCGCTGCACAGAGCCAGATCTGAGACTCGGCCAGAGTCCGATGGCGGCGGCGGCGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30809 GTCCAAGTACATTAGTTGGCACACCTATAGGAACAATTTGGGGCAAGTTTAGAAACACTG Gene GeneID:513244|LCP2:NM_001076844:8_cdna Constitutive 0 NULL GeneID:513244 20 GENE LCP2 MGC142345 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) EMBV3_32894 TAAGAAGGGCTCCAAAAAGGCGGTGACCAAGGCTCAGAAGAAGGATGGCAAGAAGCGCAA Gene GeneID:787465|LOC787465:XM_002697517:236_cdna Constitutive 0 NULL GeneID:787465 23 GENE LOC787465 NULL similar to histone cluster 1, H2bd EMBV3_15318 ATTCCTGGGAAGAGGGACCCGCAAAAGCTGTCACACTGGGCGTCTCAGAAGGAAAGACAA Gene GeneID:407770|PLXNA2:XM_002694298:395_cdna Constitutive 0 NULL GeneID:407770 16 GENE PLXNA2 NULL plexin A2 EMBV3_28553 CCTGGCAGTGACTTCTTGGGTTTTCGGAGTCCTCCTAGCCCTAGTCCACTTGGTATTACT Gene GeneID:532446|LOC532446:XM_002687128:487_cdna Constitutive 0 NULL GeneID:532446 4 GENE LOC532446 NULL similar to Olfactory receptor 2A25 EMBV3_03371 CCACAGAAACAAAAGGTGGAAAAAGGACGGGAAAGAAAAACACATCCCAGGATTGGAGCC Gene GeneID:532944|LHFP:NM_001077990:145_cdna Constitutive 0 NULL GeneID:532944 12 GENE LHFP NULL lipoma HMGIC fusion partner EMBV3_03607 TTTCACGAGGCTCCGTCAGTTCCTCAATCCAACAGGCAGAGAAGTCCCATCCACCCCTTA Gene BVT0102_346042 + 0 NULL GK000008.2:39061811-39089602 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12660 CCAAATTCAGCTACAAGATAGACTTTGCAGAAATGAAGCAGATGAACCTCACCACGGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16651 CTGTGGACTGCTCATGCTGGTGTCCTGGGTGATGAGTGCTCTGAATTCCTTGATACAAAG Gene GeneID:509690|LOC509690:XM_002688690:145_cdna Constitutive 0 NULL GeneID:509690 7 GENE LOC509690 NULL similar to CfOLF4 EMBV3_22276 AAATCGCTCAGCTGTCTCCAACTCTTTACGATCCCATGGACTGTACCCCTCCAGATGCCT Gene BVT0102_071870 + 0 NULL GK000005.2:103915854-103939885 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23339 TAATGGTGGCAGCAGTCTTCATCGGTCCCAGTCCAGGGAGTCCTCAGCAACTGGAATATA Gene BVT0101_006004 + 0 NULL GK000005.2:63239758-64333250 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11494 CTGGATTCCTTGGCTCGTTCATTCAGTTGTGTGCCTTACTTCAGCTCACTTCTGTGGACC Gene GeneID:519282|LOC519282:XM_002707872:98_cdna Constitutive 0 NULL GeneID:519282 15 GENE LOC519282 NULL similar to olfactory receptor 1440 EMBV3_08615 CTCCTTCAGCGCGACCCACCGCCTCCACAGGAGGCAATTATGAAGCCCCTTGATCATAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37133 TAGAGAGAACTCAGTTATAAGCATAATCAGTCACCCCTTTATTTCTTCCCCGAATCTACC Gene BVT0102_111722 + 1 EMBV3_37834 GK000028.2:29703406-29750368 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20730 ATGAGGACACGACCCAGCGCTCTCCAGGTGACACTAACGGGAAGCGGGTGTTGGAAATAA Gene GeneID:512750|UBE3B:XM_002694536:480_cdna Constitutive 2 NULL GeneID:512750 17 GENE UBE3B NULL ubiquitin protein ligase E3B EMBV3_42067 CACGCTGTTATATATACACCGAGTCCATACGGAATTCAAATCAACTCCTCTGCTGGGCAT Gene BVV0102_145541 + 0 NULL GK000027.2:13298892-13339705 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00157157 1 XLOC_095617 NonCoding TCONS_00157157 XLOC_095617 NonCoding NonCoding - 27:13338111-13338816 - TSS117482 705 1 0 5.7896510154965e-05 1.42531046114565e-05 0 0 2.10092867268468e-05 0 0 2.51690234136184e-05 0 0 0 0 0 0 0 0.00011238943526253 0.000682929461515173 0.0005338509035619 0 0 0 0.00184201124479002 1.30128319687123e-05 0.000118898088736563 0.000137586722946865 0 0 0 0 0 0 noncoding 0 0 0 0 -0.322770338932619 0.125114026466957 0.0447318712009855 0.355949520880024 CAGGTTTTCTTTTTAATGCAGAGGTACTACTCACAATAGTGCTTGTTTACACAGGCAATTGTTAAAGTTCCCCATGTATTTGTTCTCTTTACACCCATTTCTTTGAAAAAATACACGCTGTTATATATACACCGAGTCCATACGGAATTCAAATCAACTCCTCTGCTGGGCATTTCATTTAACACCAGACAGAAATTTAAACCGTGAGTGCCGATCACGTAAGACGAGGTAAGTGCCTGACTTCTCATTAGGTTTATCCCGGCGTCTCCATCACCCCTTCAAGCTGGGCCCACAGTGGTTTTGTTTTAGGTCGAAATGTTAAGTTGACCGTGCCCCTATCGCCGCCAGGAAGCCGTCACCTCCGATGTTTCAAGTTTAAACGTTCTGATCCCCGAGGGTAAAACATTAAAAACAAAAACAAAACAAAAAAAAAAACGTTGTCTGTTGGACAAACAGGTACAGGGCAGAGTCTGCCTAAAATAAACGCGAGTCTTCAAAAGTTGGAGGGCGGACCAAACCTGCAGGTCCTGGGGCGGCGGGAGACCCCCCGCAAGGCCGGGCGCGGGACGAAGCCGAGAGGGAAGATCCCAAAGGCGGGCGGCCTAAGGCAGAAAGAGACGCAGGAGGCCGCGGGGGCGCCACCGCCTACCTCCGCGATCGGCCCCCGGTGCGCCAGGAGCCTGAAGGCCGCGGTGGGAGGAGGTC TCONS_00155011 . 5' 890 TCONS_00155011 . 5' 890 EMBV3_33348 TGCCAGAGTCTGCATTTCAAATGTTATTTATTTTAAGTGGATGTAGTGAAATCATAGCTC Gene GeneID:507148|MGC157163:NM_001101880:95_cdna Constitutive 2 NULL GeneID:507148 6 GENE MGC157163 NULL hypothetical LOC507148 EMBV3_32273 TGGAGCTGGTTGACTTCATCTTAGCAGTTGTGACGTTGGTGCTCACCCTGATGCTGGTGA Gene GeneID:781363|LOC781363:XM_002707688:179_cdna Constitutive 0 NULL GeneID:781363 5 GENE LOC781363 NULL similar to olfactory receptor Olfr227 EMBV3_26048 GCATGGCGGCCCAAAATTTCCTGGGAGGGGTTATCTGGGGGAAAAACCATCTACTCCTAT Gene GeneID:407189|KERIA:XM_002687262:124_cdna Constitutive 0 NULL GeneID:407189 5 GENE KERIA NULL cytokeratin type II, component Ia EMBV3_24869 CGAACTTCAGTTACCAAGCATAGCCACTGGGCATCACTTCTTCATGTTAAAGTGCCTTTG Gene GeneID:540117|SLITRK2:XM_002699621:10_cdna Constitutive 0 NULL GeneID:540117 X GENE SLITRK2 NULL SLIT and NTRK-like family, member 2 EMBV3_07417 ACTGTGACTTCTCACCTAGTGCAGAGCTTCTACCCACCTGTAAAGACAGAACCCCTTCTC Gene GeneID:536073|KDM3A:XM_002691360:204_cdna Constitutive 0 NULL GeneID:536073 11 GENE KDM3A JMJD1A lysine (K)-specific demethylase 3A EMBV3_33168 GTGTTCCATTGGTAAACTGTCAGGGGTGTGTAGAGTGAAAGAGAGTGAAGTCTGCCTCCT Gene GeneID:506935|CCDC32:NM_001075286:124_cdna Constitutive 0 NULL GeneID:506935 10 GENE CCDC32 MGC142812 coiled-coil domain containing 32 EMBV3_41890 CTGTACATCTGCCTAACAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATGTGGG Gene GeneID:281220|HAS2:NM_174079:2_cdna Constitutive 0 NULL GeneID:281220 14 GENE HAS2 NULL hyaluronan synthase 2 EMBV3_04228 CGCCCTTCCAGCCGCAGATCACAGACGACTATGGCCTGGACAACTTCGATACGCAGTTCA Gene GeneID:286877|PRKCZ:NM_001077833:31_cdna Constitutive 1 NULL GeneID:286877 16 GENE PRKCZ NULL protein kinase C, zeta EMBV3_04071 GCCAGACCCCAGTGTTCTCCAAAGCTAGATTTTGGCTTTGGGATCCAAGAACACATCGAC Variant GeneID:512745|RPL11:NM_001075581:149_cdna 182^330 1 EMBV3_03600 GeneID:512745 2 GENE RPL11 MGC127967 ribosomal protein L11 EMBV3_41531 GAGAGCACATAGTTCCAGCCTCACCCGAACACAGGAGCACAACGATCAAAGCGACGGAAA Gene GeneID:540101|RABGAP1L:NM_001105427:178_cdna Constitutive 0 NULL GeneID:540101 16 GENE RABGAP1L MGC157043 RAB GTPase activating protein 1-like EMBV3_08295 AGGGGCAGCACCCAGAACCTTCTACTCAAGTCTCATGCTGCGGAAAGGACAGCTAACTAT Gene GeneID:282264|KCNK17:NM_174558:9_cdna Constitutive 0 NULL GeneID:282264 23 GENE KCNK17 NULL potassium channel, subfamily K, member 17 EMBV3_40240 GTGGATGTTGGTGTTTTGTGATTTGGTGAACAAAAGTTAAATTGGCATTTTGGATGTTCC Gene GeneID:540081|MAB21L1:NM_001098110:175_cdna Constitutive 0 NULL GeneID:540081 12 GENE MAB21L1 NULL mab-21-like 1 (C. elegans) EMBV3_36755 CTCAGGACGTGCCATCAGGCTCCAGGGAAGGATGCGGAGAACTCGTTTGGGTAGGAGAAC Variant GeneID:281342|MYOC:NM_174118:64_cdna 658^783 1 EMBV3_06858 GeneID:281342 16 GENE MYOC MGC128941 myocilin, trabecular meshwork inducible glucocorticoid response EMBV3_08210 AGAGGTGTCAGAGCCAGTTGTCACTCAGCCCAGTCCTTCAGTTTCTCAGCCCAGTACTTC Gene GeneID:404110|ZFAND5:NM_001101045:1_cdna UTR3_Alt 2 NULL GeneID:404110 8 GENE ZFAND5 ZNF216 zinc finger, AN1-type domain 5 EMBV3_14553 GGAGTGATTCCAACTCAAAGGACACCCAGAGCCACCGTCTGGTATCTGCCAGTTTTTCCA Gene GeneID:614429|YBX2:NM_001098126:177_cdna Constitutive 0 NULL GeneID:614429 19 GENE YBX2 NULL Y box binding protein 2 EMBV3_31317 ACAAGGTCGCGAAAATTATAAAGAAAGTACAGGTACAAAATTGATAACTAATACCAGAAA Gene BVT0102_071137 + 0 NULL GK000016.2:6664335-6995804 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00153219 TCONS_00062753 TCONS_00185807 TCONS_00199803 TCONS_00115687 TCONS_00223462 TCONS_00124584 TCONS_00176254 TCONS_00123169 TCONS_00186108 TCONS_00165813 TCONS_00006827 TCONS_00189890 TCONS_00109859 TCONS_00249283 TCONS_00129782 TCONS_00007442 TCONS_00023615 TCONS_00054939 TCONS_00252354 TCONS_00008225 TCONS_00020016 TCONS_00064461 TCONS_00238326 TCONS_00249012 TCONS_00206427 TCONS_00156732 TCONS_00251930 TCONS_00179470 TCONS_00161793 TCONS_00040583 TCONS_00116666 TCONS_00040195 TCONS_00065249 TCONS_00056147 TCONS_00238457 TCONS_00032143 TCONS_00040699 TCONS_00238299 TCONS_00072815 TCONS_00189806 TCONS_00166617 TCONS_00218553 TCONS_00070810 TCONS_00157415 TCONS_00251915 TCONS_00224114 TCONS_00033747 TCONS_00019962 TCONS_00122314 TCONS_00176255 TCONS_00240475 TCONS_00063180 TCONS_00245928 55 XLOC_006139 XLOC_131641 XLOC_092984 XLOC_037480 XLOC_111860 XLOC_121455 XLOC_069856 XLOC_136762 XLOC_076128 XLOC_106033 XLOC_074723 XLOC_112161 XLOC_100653 XLOC_002389 XLOC_115927 XLOC_065763 XLOC_152226 XLOC_078495 XLOC_003003 XLOC_014282 XLOC_032748 XLOC_155295 XLOC_003783 XLOC_010694 XLOC_039185 XLOC_144993 XLOC_151955 XLOC_124949 XLOC_095192 XLOC_154871 XLOC_109243 XLOC_098678 XLOC_024399 XLOC_070832 XLOC_024012 XLOC_039971 XLOC_033950 XLOC_145124 XLOC_018386 XLOC_024515 XLOC_144966 XLOC_044583 XLOC_115843 XLOC_101454 XLOC_131873 XLOC_042587 XLOC_095870 XLOC_154856 XLOC_137410 XLOC_019980 XLOC_010640 XLOC_073869 XLOC_147139 XLOC_037907 XLOC_150855 Coding TCONS_00063180 XLOC_037907 NonCoding NonCoding - 15:13337249-13339072 - TSS46923 1823 4 TCONS_00063180_3 45 0.999451453647833 1 0 5.1645040196792e-05 6.98586547952357e-05 2.8761360623122e-05 2.23881124004425e-05 1.47939331892155e-05 1.75520558289444e-05 2.76810107103918e-05 4.17080279776375e-05 6.14437490854217e-05 0.0001911897780346 8.29578346790163e-05 0.000168305395425892 2.06032939051163e-05 5.58775699647091e-05 0.000189968478576644 0.00257356855123341 0.000786579120782746 0.00201031108201139 4.67074230533876e-05 0.000122324099935887 2.08045387570752e-05 0.000987868344761915 0.00128279187018706 0.00110411768246922 4.7112239654859e-05 4.18845438622482e-05 4.91710942400106e-05 0.000405647275127092 0.000662537740206253 0.000455131404241877 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 9e-43 179 68.73 0.27921009325288 NM_175900.3 C16orf54 Homo sapiens chromosome 16 open reading frame 54 (C16orf54), mRNA. 7e-06 57.2 80.33 0.0329127811300055 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 AATTCTTTATCAGGTATATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGGGCATTTATCCTGTTCCTTTATCTGCTGAGTATTCCTCTGTCTCTTCATCTTGTTTAAATTGCAGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGTGTTTCCTCGCTGTGTGTGGTTTTGTACAGGTGGTTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTGGAGTGCAATGAAATGTCCAGTAATGAGTTATGAGATGTCTATAGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGCGAATTTGCTTGGTATGTCTTGCCCTGGAACTTATTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTGAATGAATGTCCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTTGACTTAAGTCTCCTGCTTCCGATTATCGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATTGATAAAACATCTATATTAAAGATGATAAGTTTCTCTACAGTGAGGGTCACTCAGAGAGGTTCACAGGGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCAAATGAGATGAGGTGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAGTCACTTCCTTATGTGCACTCCACAACTGGACCACTCAGAGATGTTCACGGGGTTATACAGAGAAGAGAAGAAGGAGGAAGGTAACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATACAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCGTCTGGAACACACAGAAATTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGGGTCCAAAGGGAGAGAGAGCAGTCAAGCCAGTAATCTCACTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTCCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAGAACGAACAAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAGTACAGGTACAAAATTGATAACTAATACCAGAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACGATGTTAAAGAAAAGAAGAGGGAAAAGAAAGAGAGAAAAAACGAACAAACAAAAACAAACAAGGTCGCGAAAATTATAAAGAAAGTACAGGTACAAAATTGATAACTAATACCAGAAAGCAAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTTAAAAAAAAAAAAAAGAAGAAAAATAAAGAGAGAAAACAAACAAACAAATACGAACAATGTCACAAAAATTATACAGAAAATACAGGTACAAAATTGATATCAAATACCAAAAAGCATAAATTAAAAATCTAGAGTAAAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGAAGAAGAAAAAAAAAAAAAGTCACAGAAATTATATAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATAC TCONS_00058318 . 5' 272687 TCONS_00058318 . 5' 272687 EMBV3_37818 AGAAGCTTGCCCTGAGTGAGAGGAGGGACTATGGTGAAGGGAAACATGGACCATTTCTGA Gene BVV0102_005732 + 0 NULL GK000010.2:99352545-99483419 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30978 CCCCCTTTTGTCTGACGTGGTCTTAGCCGCTTTGTTTACTGCTCCCTATTGGCAAATCCA Gene BVT0101_010621 - 1 EMBV3_22469 GK000008.2:112214587-112239719 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226636 TCONS_00226637 TCONS_00226634 TCONS_00226638 TCONS_00226633 TCONS_00226639 TCONS_00229130 TCONS_00226635 2 XLOC_138053 XLOC_138660 NonCoding TCONS_00226637 XLOC_138053 NonCoding NonCoding - 8:112228267-112230785 - TSS169403 1571 1 TCONS_00226637_3 65 0.415658816040738 3 0.377036154151768 0.000219682649821377 0.000152569154046805 0.00059727519604274 0.000449888482107027 0.000231759024506011 0.000120676908972633 0.000266843112529465 9.69863253018525e-05 0.000228503891603506 1.21374347590355e-18 0 2.65905602165437e-14 1.80731520771013e-16 1.46003577880098e-18 0 0 0 0 0.000453828598231603 0.00123327422110278 8.34428973591035e-21 0 0 3.97008498019855e-17 0.000130509188399902 7.57203886800771e-09 0.000958564553797215 0 0 0 XM_005200861.1 GYG2 PREDICTED: Bos taurus glycogenin 2 (GYG2), transcript variant X1, 2e-89 334 85.37 0.178866963717377 0 noncoding TCACCACAGGACTGTCCAGGACGTCTCTCCTGCTCCCCTTACTCTCCTCTTCTCACTGCCGACCTTAGCCCTGGAGAGGTCAGAGGTGAAGCCACTTAACCATTGCCTGAACGTTCAGCTGTGTCTCAGGCTTCACATCCTGACCTAGCGGAGATCTGACGGCGCCTCACAGCCACAGGTGGAGGGACTCAGTATCCAAGCACCTTTCCTGCTAGTCACTATGCCTGCCAGTCAAGCTCTGCACACGGCTGGCTTCCTTCTAGAGTCTGGGTTTCCCTCTCTGTGTGTTTCTGTCTTCTTTTAAGGACCGCAGTCACATTACAGGAGAGACCCACCCTCCTCCAGTGTGTAAACGGCGCCTGCAGCAGCCTGAGCCAAGAACCCCGAGTGAAGCTCGAGTCCTCTGCGCTCAGCAACCCCGTCCCAACACCTTCAGCAAGCTCTTTCAGCCCTAGCTCCAAAAATATCCCGGACCCATCCGCGGCTCTTCATCTCCACCATTCTGGTTGAAGCTGCTTGCACTTCTTGCCAAGACAGCTGCAGTCGCCTGAGCAGGTCTCCCTCCCTGCCCCCTTTTGTCTGACGTGGTCTTAGCCGCTTTGTTTACTGCTCCCTATTGACAAATCCAAACACCTCACTCATGCTTACAAAACCCCACTGATCTGCTCCCTCCATCCTCCGACCTCATTTCCCGTCGCTCGCTTGCTTTGATCCGTAGCCTGCTTGCAGTTCCCTGGGTCACCGGCCTCCTTTCTGGAACGATCTCCTCTAGGTCTTTGTGAGACCACCCCTTCTTGTCTGAGACGCTCAGCTTAAACGTCATCTTATTTAGTGACGTCTAAGAGAACTTCCCCAACCGCCCCATCATCAAACCAGTCAATCCAAAAGAAAATCAACCCGGAATATTCACTGAAAGGACTGACGATGAAGCTGAAGCTCCAATCCTTTGGCCACCTGATGCGAAGAACTGACTCATTGGAAAAGATCCTGATGCTGGGAAAGATTGAGGGCAGGAAGAGAAGAGGGTGACAGAGGATGAGATGGTTGGATGGCATCACCGACTCGATGGACATGAGGCTCCAGGAGATGGTGGAGGACAGGGAAGCTGGCGTGCTGCAGTCCCTGGGGTCGCAGAGTCAGACACAACTTAGCGGCTGGACAGTGACCACAAAGAGAACCCCGACCACCCCATCGAGAGCAGTCACTTGGTTTTTCTCCATTGCTGACCTTTAATTCCCTGCAGAGAATTTAGTAAATAGATTATTTTTCTCATTTATGTGGATATTTATTGTCCTTCTCCCCAGAATTCCTAGGAAAGCAGGGACCTTGTTTATCTTGATTACACCATCTAGAACTGTGTATGGCACATAGAAATAACTCCGTAAATATTTACTGAATAAATAATCCTGCATAGACGATCTTTGTGTATGAACTTTTTTCTCCCCCTACTTTTGGGAATTTATATAAATAATCCAGCAGGAGGAAGATTACTGGATCAAGGGATGTAAACATATCTTGGCTCTTGGAATGTATCGTCAAATAGGTTTGCCAAGATGTTGGGTCAGTGTTCA TCONS_00229131 TCONS_00229132 TCONS_00229133 TCONS_00229134 TCONS_00229135 TCONS_00229136 TCONS_00229137 TCONS_00229138 TCONS_00229139 TCONS_00229140 r 3' 8749 TCONS_00229129 r 5' 10111 EMBV3_14904 AAGCCTGGGTTCACGGGACCTGTTTGCGCATGTTTTGCTTCCTTGGGAACGGCAGTCACT Gene GeneID:785045|PGM5:NM_001102335:32_cdna Constitutive 0 NULL GeneID:785045 8 GENE PGM5 MGC138036 phosphoglucomutase 5 EMBV3_42315 CTTCAAGCACCCGTTTGCCATCGAAAACATCATAGGCCGGGACTACAAGGGCGTGCTGCA Gene GeneID:613814|FOXB2:XM_002689669:17_cdna Constitutive 0 NULL GeneID:613814 8 GENE FOXB2 NULL forkhead box B2 EMBV3_38140 CTGGCTGCAGGCCCTTGATGGAGGAATGACGAGTTCTTCTGGCCCGTTTATCTTTTGGAT Gene GeneID:509420|LOC509420:XR_084713:12_cdna Constitutive 0 NULL GeneID:509420 8 PSEUDO LOC509420 NULL similar to chromosome 9 open reading frame 61 EMBV3_27557 ACAAGATCCAGTCATCTGGGGGCCCACTGCAGATAACAATGAAGATGGTGCCAAAAATGC Variant GeneID:539294|PPCS:NM_001102228:254_cdna 618^835 1 EMBV3_26290 GeneID:539294 3 GENE PPCS MGC157065 phosphopantothenoylcysteine synthetase EMBV3_23933 CGGCCGCCATGGTGCCTCACCCCTGCTACTACATTTACACCTGGATTCCTTCACAATTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03701 GGCCATTGCTTACGGCAGGAAGCTGGGCGGGGCAGAAATACTGAAGAAAATTCCAGGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12692 GCTACTCGACTAACTGGTGGAAAGGAAGTCACAGAAAAAGTGATCACAGATATTGCTGGG Gene GeneID:504637|RFC4:NM_001045894:51_cdna Constitutive 0 NULL GeneID:504637 1 GENE RFC4 MGC137172 replication factor C (activator 1) 4, 37kDa EMBV3_38839 CCTAGGAATGGTGGATGGTTTGTTGCTCACACCCATAGCCATGAGCTTCCCCTTTTGTCA Gene GeneID:507971|LOC507971:XM_002689128:109_cdna Constitutive 0 NULL GeneID:507971 7 GENE LOC507971 NULL similar to olfactory receptor, family 2, subfamily T, member 3 EMBV3_17561 GGAGCAAGCATATTAGTCTCGAACTTCCTTTCCAGCCTGTCCTTCTAGGAGATTTCACTC Gene BVV0102_213400 - 1 EMBV3_16465 GK000003.2:113809-148929 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174970 1 XLOC_104753 NonCoding TCONS_00174970 XLOC_104753 NonCoding NonCoding - 3:139525-139888 - TSS129729 363 1 TCONS_00174970_1 58 1 0 3.74811327620668e-05 0 0.000254931559828495 0.000114382218555952 0.000163211959854628 5.9124866841266e-05 8.03265219822687e-05 4.88819255960674e-05 0.000521662139689693 9.06777582162538e-05 0 9.85037397905319e-06 3.16174577783672e-05 0 0 0 0 0 1.97545535080073e-05 0 0 0 0 0 0.000305387843215178 9.70449402565342e-05 4.84227902606253e-05 0 1.33735838947365e-05 0 XR_083239.3 LOC787549 PREDICTED: Bos taurus coiled-coil domain-containing protein 3-like (LOC787549), misc_RNA. 0.0 641 99.17 0.997245179063361 0 noncoding CTCAATATTTAAGTATATACTGTATCCAAAGGTCTTGAAATGTTAGGAGTCTACACAGAAGACAGATAGTAGATACAGATCAGATCTAAACCTAAGTAATTCACATGATAGAGATATGAATAAAATGCCAGGAGGCTCCAGAAAAACCACCGTGGTCGGGGTGGGTTGCATCAAATAAGTAAAGGGAAATGGAGAGAGAGAAGATAAGGAGAAAAGATAACTGGAAAGGATCTCTTCTTATTAACGTTTCTGCTACAAACTTCTGGAGCAAGCACATTAGTCTCGAACTTCCTTTCCAGCCTGTCCTTCTAGGAGATTTCACTCTATGGACTTCAGATGGTCAGCCTCAGCACCTCAGGCTTC TCONS_00168179 . 5' 55992 TCONS_00168179 . 5' 55992 EMBV3_12928 CAACTGAAATGCCAACAGGGAAAAGCAACAGAAAGCATGGCACATCCATACAAGGCAGTT Gene BVT0102_048266 - 0 NULL GK000024.2:46951489-47014881 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140424 TCONS_00140419 TCONS_00140421 TCONS_00140423 TCONS_00140422 TCONS_00140420 1 XLOC_085126 Coding TCONS_00140419 XLOC_085126 NonCoding Coding PIAS2 24:46989361-47001688 j TSS104811 9926 6 TCONS_00140419_7 81 0.207233528107999 3 0.194953756287522 2.88244187357576e-05 5.35517726669675e-06 6.94005574939301e-05 2.79494404135372e-05 3.38549444683076e-05 1.52210027284694e-05 1.261870453131e-05 1.32108444264294e-06 0.000118292864758809 1.81097781141706e-05 5.56065224529535e-06 3.1101329695308e-05 1.31183754768428e-112 2.42804419364557e-06 7.58922615970714e-06 0.0014073415787509 0.00112236069866014 0.00138331702603807 3.85946433332237e-05 1.01313168996491e-05 5.71113520297408e-06 0.00037539564665135 0.000468759252194529 0.000555958627825833 4.68539187879964e-05 8.25418052277056e-05 6.89117018334953e-109 0.000129553947727659 7.68950042872172e-05 0.000228122479049879 XM_005196788.1 PIAS2 PREDICTED: Bos taurus protein inhibitor of activated STAT, 2 (PIAS2), transcript variant X9, mRNA. 0.0 6655 100.00 0.371650211565585 XM_005258377.1 PIAS2 PREDICTED: Homo sapiens protein inhibitor of activated STAT, 2 (PIAS2), transcript variant X1, mRNA. 0.0 652 71.82 0.127140842232521 0 noncoding 0 0 0 0 -0.21698751079729 0.279582069978254 0.0160110452707304 0.752550963342863 GTTCAAGCTTCAGTGTTACTGTTGGAGAGAAAATGGTTTAAGTGAGAAATATTTACATTGAAATATTATTGACTTTTATGGAGACAGCATCTGTATAATACAGCTAGGGAGATACAGTGGGTTTCAATCAAAATTTCAGAAAAATTTCTAGATACTTTTATTATGGCATTGTATGTTATCATATTCAGTTATCCTTGGATGAGATGTCAAAAGATACAGATCAGTAGACTGTTAGCACACATGAAATAATCATCCAGTAATAGAAATGCTGAATATATAAAACTTGCAGATGATATTATAAGGGCTAGACAGATTTTGAATTACTGTTCAGCTGCCGCAGAGAGAGGATTTACTCAGCGGTATTATTACTGTGAACAGAAACTCGCTTACTGAAGTACATCACCTCCTTAGTATCACTTTAATGGGGAACTCTTTGGAAAAATTGTTTATGATTCCCTTTGTCCAGTGTTGGCTCAAATCTTGTATCTTATAGCTAGTGATAGCCATAAGAAACGACAAGTCATGTCAGCAGTTTTCAAAAATCTTTTAGAAGTTGAATGACTTCTTTCAAATGATTGGTGCTACAGCTTGTATTATTCAGTAAGTATTATCATTTTACCCTTATTTAGAGATTATAAGGGAATAAACTTAAACATTTATCAGTTGTATTAACACAGGTTAAATATAATTTCCCACTCATATTCTCTATTTAGACTAACAGTCCAGTATCATAGTACACTGTATTATGATTATTGTACTTGAGGTGACCTTGAATACCAGGATATAAAAACTCATAGAATAAATAGAAATTGGCCTTAGTAATCATATACCTAATATATGATTTTTTTTTTATAATGTTTTAGAATTTAGTCAAGCAGAGGTCTAGGGGAACTGACCTTGAAGTTTATTGCTAGACTTTTCAGACATGAAGATTTTATTATTTATTGTTATAACTTTAATATTTCAAAACAGTATTACTGGGCAACCTTTTGTTACTTTTCTATTTCTATATAAGTATAATTGGAGGATCCCAAATCTTTAGAAAACTGCATTAGCTTATAACCCAGTACACCGTGGCAAGGTTTAGCTTGTTAGTAAGCAGCGGCTACGAAGTGCTTGCTTTATGCAGCGTATTGAACTGTGTACTACTCCTTTTGTTGTGGGAACCGGGGGACAGAGAGCTGTCCGTGAAATAGACATTTATTTGTTTTAGAAGTGATATTTTAGATGAAGCTTAATGTGTATTTCTAAAAAATAAATGTGAAGTGTCTTAAGAGACTAAGCATGTTTTTTTTAATGTCTCAATCCAGATAATCATCTCTTCATTTTATTGCTTCTCATTCCGCTAAGTGAAAATTTGCTTTGACTAGTTCTATTTAAATTTTGGACTCCTCTACCCGTTTTAAACCTCTGGGGATGGTTTTTCCAGTTGTTTTGTCAAGACATATGTACATTTTTGGGTTTTATGCACATAAATATCCTGAAATATCCTGATTGTGATATAGACCTTCCCTACAGCAGAATGGTTTGGATTTTCTTTCCCTTATTCCAGTTGATCCCCAGATGGATTCGTTTGCCTTCTGAGAGATGAACACAGATGACTGCAACAAGAACCACATGACGTGCACGGATTTTTCTTACTCTTGGTGTCCTCTGGAGCATCAGCTACATTCAGCTGTAACTGTATCCTCCTGAGAGATGGATTTCAAGTTCATGTTACTGGATAGATTCTACAAAAAAGTTAAATTTTTTTTGTTGTAATACACAGCAATAAAATTATGTAAATATTCAAGTATACTTTTTTCTAATTAAAAAAGATGTAATCAGTGATTCTAAAATGACAACTTTTTGTTTAACCTGATGTGAAGGAAAAAATACATGGAAAGAAGTTACATTTGCCAAATGAGTCCTTTCCATGGATTTGTTCTGTTTTGCTGAAGTAATGAAGTCTAGATAAGTGGCCAAAGCTTGGGTTCCACTGTTCTCCGTTTCCATCCAAGAAACATGGCCTGTATGTTTCCCCTGGCGGTTGTTTCTACTCTGGTGTTCTGTGCCCATGAGTGCAGAGTGGAGTTCTGGGATTTGTCTGCTCCTTAATAGTGAGTATGTTGAAGAACACTATACAGAGTCTGCCCTGATGTAATGTGTGCTGTTTTTGGTCATTGAACTTTCTCATTCTAGAGATGTCTGTAAATTAGGGCTTACCTTCTCAACGAAGTTCTCTGTGACTGTTGACTGAAATGTGTCTGGATTAAGGTGTGGCTGGAATGTTAAGATTGTGTTCACACTGTCCAGAAATATTGAGAGCATGGAGGCAGTAGAAGAACAGATTTAGGGGCAGTGGGAATAGCAAAGTTTAATTTCTTCCTAAGAACTTCTTTTACTCGTTTATTGTATAGGATAATGTTCAAATCTGCAATGAGTAATACTGACAAAGTATGTCATAGATCTCATTTTTCTCATAGCAGTGATTTTTAAATTTAAAAGAACAAACAATAGCAAAGGGATGGAGGTGGCATCAGATTTCCTTTTTTTAAAAAAGGAGATGTTTGCTGAAACCACAGAAGATAAAAACAGAATTAGAAGTGTTTGGGTATTAGAAAAGTTTGAAGAGAGGATGGGCCTGAAACCCACTTTGAAAACCACTCTCTTACTATGTGTTTGATTTGAAATCTCTCAGGAAGCTGAATTTTACCTTTAGAGAAACATTTTTATCCAGATTTTATACTTTGTTTTCATCTGGCTGCACAATTTTGATTTCTCAAGGAGTTAATACTTTCCGAATGTTTAGCTTTCTCTCCCTAAGCTGTGTCTAAGTAAACCTTTGTTTAAAAATCATGAATCTGGCTGATTTCTCAGACTGAAATGCCCAGATGAAGAGCACCAGTTTCGTGTAGGACAGGGAACAGTCAGGCCTGGTGCAACTCCAGGGAGCTGCCTTGTCGCTGCTCGGTTTTTCATACCTTCTCAAGTTCTCGTGACCTTTGTGCTGTTTTTATACTCATTTAATTTCCTGTGAGTTTTTACATCATCCCTTCTTTGGCTGTATTATCCCCTTAATGTATTATCCCTTTTGGAGAGTTAAAAACATGGAAAACAAGCATGAATCTTCTGCAGTTGTTACATCATAGTTGCCAGTTTTCAATTCTTAGGACATGTTGCAGTCCTTTCGTCCATACACAGAATTTCTTCCTGGTAAACTTTTATATTGCTGCTCTAAATGTGGATGCAAGTTCTGTTAACTCTGTAATCAGACAGAAAAAGTAACCTGATTTGTGTGATATAATTTGTTAATAAAGAAATGCTGTATATTTGTTATCATTTTGTTACCCATTAGATTCTCAGAGACCCCCCCCAACTTAACCAACAGAGTTTTATAAGGTAAATGAAAAAAATAATAGAAATTAGTTCATTTACTCGATTCTTGTAACTGATAACCGCTGTGCTTTTATAGTTGTACTTTTATTTTCACTATTTTATGTGAACAGTTGTATTGTTCATTTTTGGTGCTTTACACTAAATTACATAAAATTTTTAATTTATCTCATACAGGCGACTAACATTTTTAAAAATATACTTTTGAGTTTATAATCTTAAAATTGAGACTTTTATGTATGTATCTTTGAAGGTGAGTACCTTTTTGTATGCTTTTGGCTCTATGACAACAGCATGCTTACTAAGCCATTGTCCTTTTTTTAGTATGGCCACCAAATACTTTTACTGGGACCCTGCCTTTGTAGTAGTGTCTTTTACTAGCCAAGATACCTGCTCAACCAAGTATAATTCAGTTTCAGAGGAGGTCATCGCTACTTGTACTTAGGTGGCAGCCAACCATCTGCCATCTGATGATGTGTAAGAAAAGGAACTGTAGTTACCAGCCTCTTACAAACACTTAACCAGCCTGTGTTTTTATCTTTGTTCACACAGAAATGTTAGACGAGTTTCCTTGCTCTGATAACTCATGACAATATAATTGGTACTGAATGTAGCTTCAGCCTAGGGTCTGCTTACATCGACTAACTTTTTGATTCTTAGGTAAGCCGCTTTAGGACTTTGTTTCCATTTCTGCCCAGAAGGTATAAATTCTTTCAGCATCTGTTGTGGGATGATTATAAAGGCCACATGAAACTGTAGAGTCCAGAAAGCTAGAATGGAAATACCATAATTAAGTGAACGATTATGAGTATACATAAGGAGATCCATAACTCTGGGTATAAAGCAAATTTCTCTAGGGTAGAATTTTGGAAGGATTTGAAGAAAGGTTGGATTGTAGAGGAAAGATATTCAACAGACTGTCGTGATTTAGGATTCAGACCTTTCCGCCATTCTTCATTCAGAGCAGTCCTGAACGTCTGTCATCTAGTAACCAAGGTGTCTGCTTTTCTTCTGCCAAAAAAGTATTTATTTTACATTTCGTCTTTTTAAGTAAAGTTGAATTTTATAAAATATTAGTTCTCAACTCAGTCGTTCATTTCTCTCTAGTCCCAGTGGGTGTGAAAAAAGTCTCCCCCCCACCCCAAGTAAACACTTTATTTTCCTAATCTTTTTCATCGTGGAAAACGTAGAGCAGTGTGCCATTTAAAACTTGGGTCTGACGTTGTATTTTGTGACCCTGGGTCTAGGTCTGTGTGTTGTGGGAGCATGGAGTTGTCATTTAGATTGGTAATTCATAATAGAACCTGATTCACCATCTTTTCTGCTACATTTCTACGTGAATATGGTGGAACTTACAGAAAAGAAATTAAATAACTTCTCTGCTTTTTAAAGAATGACTGGTTTGTAAGCCCCCACTTTTTTGTTAGGAACCACACTCCAATTCCTAGCAGAAACCAATAAATCTATATAAAAATGCCCATTCTGCTTTAATGCTTGTCTGATTCAATATTTTTTTTGTTTATGTTGGTAATACATGCTTATTGTGGGAAGTCCAGACAATACAGAAAAGGTAGAAAGGGCACTTAAATATTTTTGAATGTTTCTTGCCGGTCTCTTTGCTACATGTTTGATTTTACATAGTTTTATTCCTTCTCAGTGTAAGTTGTATCTTGATTGTTTTTTCTCAGTCTCCAGGCATTATTCCATGTTACTAAAAACTGCCTTGTATGGATGTGCCATGCTTTCTGTTGCTTTTCCCTGTTGGCATTTCAGTTGTATCTCATGATGCTGTTACAGTGCATGTCTTTGTGCATAAATTATTTCCTTAGGATAAATTCCTAGAGGTGAGCTTGAGTCAAGGATGTAAATACTTCTGTAACTTTTGGTGCACAACAGTTTTCCAAGTGGTTTTGCTAACCATGTGGTATGAGAACTATCTAACCATATTTTCCAAGAATATGTACCATTACCTGTATGCAGGCATCTGCATTAAGGCCTTCCACCTCTGACCTTGGTGAGCTGGGGTAACTGATTTGGAGATAATTGGCAGAAATTTTCCTGGGATGTCTCAGTTTCAAATATATCTCTCTGATATGTTCCAGAAACACCTGCGTATAAGGATATCCAAATGGTTTTTCACACATTTTTACTTGCATTACAAAGTAGCCCATGTTACACTACGTTTTCCATTTTTAGTTAGAAATTCTTGACTTTCTGAAACCATCTTTGCCTGGGGCCAGCCCTTAGTAGCCAGCTCTCTCTTTTTTTCTCTTCCCTTAGGCTCCATTTTGGCCTTTCTGAGTTCCCCAAGGCCAGTAGGATCTTCTGAGCCAAAGGCAGTGCAACTCAAACTGGAAAAGTGGTAAGGCTAAAGCAACAACAAAAGCAGAGCCAAGCTTTGCTTTCTCATTTTTTTCGTGTGTGTTTCCCACCCCATCTTGGTGTTCTCAAGGTAGCTCTGGGATAAGAAAAACAGACTGCAGTCGTCTTTTGCTCAAGGTATTACTTTCTTGATTGGCATACCATGTTGTTTCCTGAACTGTTTCTTTTTGAATGGATTGTAAAGCTGCTTTTATGTTTTCAAAGCTCAAGCCTTTTACATGAAGAGTGTTGTGTTATAAAATATCCCTCGTATTTTGGCCTTCATCACACCATTCAACAAGGTTTCAGTGTGTTTTGAAAATGTATGTGGACTAGACTGACGTAACAGATCTGGTCCCATTCTTCAAAGGGCTTACAGCAAGTTTTCAAAAATCAGGAATTCTTACCTACTAAGAGCTGTGCTGAGCAACCTACAACATATCACATTCCTTACCGCAGTCTTTCAAAGGAAAGTAGTGTTGTCTTTGTGTTGCAAATGAAGAAACAGATAAATTTTGCAGTTGGACTTGGGTGTCTGAAACAGACCTATTAATTCAAAAGCCTTATGACTGAAGTGACACTAATTAGGTAGGCTATTTGGGAGGCTGGTGTGGTAACCTAGACATAAAATTATGAGACCTGATTTCAGGTGATGGCTATAGGAATAAGGAAGGAGTGGATGATGGAGCCATTTCAAAGGAAGATTCAAGATTAAGTGGATGTAGGAATAAGAGCTGAGTCCATTTCTCAAGGTAGAATGGACAACAGTCATTAAGGGGAGACAATGGTGAGTTTGATGATTAAGATGAGATTTCAGAAAGGAAGTTTTCAAGAAGCATATTTTTGTTCTGCAGTCTTAAGAAGTGCAGACTTCCCTTGCCTCCATTTTTACCGTCACTGGTCTCCCTTCTGTATGTGTTGCAGTCTCTCCCGATTGCCTGCCTGCCTTTGTGCTTGCACATGCCCAGTCGCTCAGGCGTGACTGACTCTCTGCGACCCTTTGGACGGTAGCCTGTGTTGCCTGCGTCGCAGGTGGATTCTGTACCTGCTGAGCCATGGGGAAGCCCTCTGTCCACCCTCTATCTTCCCTTAACCATGCTTGGCTGCAAGTTGATGTTTTTTTGAGTTTGTACTTAACTGCCTTGTCATAACAAATTTGGCTGTCTCCTAAAGGCCTGCCAAAGCCTGCAGCTCTCACCAGTGTGGGCTGTGTCCACATTCCACTATCTCAGGAGGTGGTGGCAGCTGCCCTTCCTTTGTCTTGTAATTTCTAAATAATTTCTCAAGGCTTCTGACAAAAATCTGCCCTTTTGTTGCCTGTGTCAGGAAGTTACACTGTTAGTTACTTCTGCTCTTAACCATCGATCACTCCCATTGATTTGCTGAAGGCCTCACTTCCTGACAGTGTACTTGGCCATCTCTGATTCTGTCGTATTCTCAGTGACTTCATGTTCTGACGGATGACCCATCCAACACTGGCTGGTGAGGTTTTAGGTTATCTTGCCTCCAACATTTTCTTCCATTGAAACTCCCTATTTAACCCTCTCTATTTTCTTTGTACTCTTACCTAACGTCATTATCACATCCTTCAGCATGTCCTCAGACCCCTTTCTCAGTCACCTGCCAGTCCTTTGACTTGACACGGCATGGTTCTTTCCCCATTCTCATCAATTAATGCAAATATTTCCATTCCTTTTTTCTTTTTTAATTGAAGTATAGTTGATGTATAAAATTATGTTAATTTTAGATGTACTACATGATTTGATGTTTGCATCTATTCTCACCATCATAAATCTAGTAACCATTTGTCTCCATATGAAGTTATAATAATGTATTATGCTGTATGTTTTCATTCCTGTGGCTTATTTTATAACTGGAGGTTTATATCTCTTAATTCCTTTTACCATTTCTTCCCCTCTCCAGCCTCTCCCTCCTGGCAACCACTCATTTATTCTCTGTATGAGTCTTTTCATTTCATTTGATTAGATTCCACGTAGGAGCAAGATCATGTGGTATTTGTCTTTCTCTGATATATTTTGCGTAGCATAATACCCTCTAGATCCATGCATGTTATTGGAAATGGCAAGATTTCTTTGTTGTTGTTAATGGCCGTGTTGTGTATGTATGCACTTCTTTGCCCATTCATCTGTGGGCACTTAAGATGCTTCCATATACATTGGCTATTGTAAAATACTGTTGCAGTGAGTATTGATGTACACATACCTCTTTGAAATCACTTGACATCATGTAAATACCCAGAAGTGGAATTGCCAGATCATATGGTAATTCTACTTAATTTTTTGAGAATCCCTCGTACTGTTCTCTGTTCTAGCTGCACCAGTTTACTCCTGCCAGCAGTGCACAAGGGTTTCCTTTTCTCCACATCCTCGCTAACACTTACTTCTTGTCTTTTGTGTGTGTGTTTGATGACAGCCTACCACTCCTTTTCAGAACACACCTTTCTTAGCAGGTGATCTTGTTTCCAAATTCAATTAGAAGATTCAGGACTTCAGCATGGTTTCTTTACCTCCGCGCTCACCTTCATCCTTTATTCCAGCCTCAGAGGACAAGTTGGGCCAAAGGCCAGTCCAGCCCCATGAACCTTCGATGCCTGTGTCCTCTGTTGTCCTCAGGACCTCCCTCCATGAGACTTTCCCTCTATCCTCTATGTCTTCCACCTTTTGGCTGCTGCTTTTGGCTTATAAAAGTCTCATGTCATTAAATATTTGAGAGGCTGTTTATGCCAGGCACTGTATCAGGCACTTGGAACACACGACGCAGACTTACCTTCACCAAAGTTGCCATCCAGTAGATGGGGCTTCCCTGGTGGCTCAGCTGGTAAAGAATCCGCCTGCAATGTGGGAGACCTGGGTTCTATCCCTGGGTTGGCAAGATCCCCTGGAGAAGGGAGTGGCTACCCACTCGAGTATTCTGGCCTGGAGAATTCCATGGACTCTCTAGTCCATGGGGTCACAGAGTCAGACACGACTGAGCGGTTAATACTAACCACTGACTAAGGCCATGTAGATCAGTGAATAGGGAGATCGTAGTGCAGTGGTTAAAGGTGGAGTCAGGGTGCTACAAGAGCACACAGATAAAGAGACGGCTGAAAATGTCCAAAATAGCCAGAAGTTTGCTAAGGAATATTAAGAGAAGTATGTAAGAAATCATGAAAAATCATGTAGAATATCAATAGCAAGAAGTTATTGAAGACTTTTCATGGTGATTCACAGTAAGGAGCATTGGTTGAGTTTCATACGATAATTTCCATTCTACGAATGTGGAAACAGATTCTGAGAGGGTAAGTGACTTGTAGCATATAAGCGGGGAGTCAGGCTTCATACTCAGTTTTTAACCATTTCTCATAGGGGCCTTCCTTGACTATTCTGTCTAAAAAGTGTTTCCTAAATATCCTGACCACATCACTGCTTGTATCCTATATGGCAGAAGGCACAACCTGTGTTTATTTTATGTATTAGTTCACTGTGTATTTGTTTCCTCTGCTAGATTGTAAGCTCCATGAGGGCAGGATATTTCAATTGCATCCCAGAGCCAAACATGGTGTGGCACATGGTAGGTGCTCAATAAATGCTTGTCAATGAAGAAATGGTGGGTCGTCATTTGTGTTTGACTTAAACTGACTGTAGAAATCACTTGACATCTGACCAACTGGTATTCACAAGGGAGGGAAACAAGGCAGACGGATGAAAGAAGCTGGGGACTTTGGAGGAAGTGAGCTCACTAACCTAATAGACTCCAAACTCTTACAGGGCGAGGGCCAGGAATGGGAGATGGGTAGGGAAATGCACAGTAGGGACAAGAATGTGCCAGTAGGTGTTTCATTAAACCTGAAGGCCTAGGACCCATTGTAGACTCAGCCTACTGTATACGTAAGGCTGGGGAAATTCTGCCTATAATCTCTATATCCTAGGGGCCAGGTTACCTGGGTCAGCTATACTACTATGAATATTGCAGTACAATTGTATTGGTATCTAGGAATACCAGACACCTTACCTGCTTCCTGTGAAACCTGTATGCAGGTCAAGAAGCAACGGGACTATGGACTGGTTCCAAATTGGGAACAGAATACATCAAGGCTGTATGTTATCACCCTGCTTACTTAACTTATATGTAGAGTACATCATGGGAAATGCCTGGCTGGATGAAGCACAAGCTGGAATCAAGATTGC EMBV3_35012 GTAGTACTGAATTACAAGGGCCGTCGACCAACGCAGATGCTTTTCTTGTTCCTGGTGGGA Gene GeneID:509728|SLC22A10:NM_001101917:560_cdna Constitutive 0 NULL GeneID:509728 29 GENE SLC22A10 MGC179446 solute carrier family 22, member 10 EMBV3_06477 AGTGAGTAGATGCTGCCAAGCCTGGAAAAGGATCGCTGATGCACTTCATGCCCTGACTGT Gene GeneID:617635|RAB24:NM_001034802:46_cdna Constitutive 2 NULL GeneID:617635 7 GENE RAB24 MGC127026 RAB24, member RAS oncogene family EMBV3_21134 CACATTTGCCTAGACAGCTCCTCCCGAACATCTTTCCCAGGTAGACCGCAGGGTGGATTT Gene BVV0102_185251 + 0 NULL GK000005.2:119885164-119895506 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17886 TCTCAGAGCAGAAAACGTGACTTGATAAGCACTCCTGGCCTGTGGACTCAGTGCTCTTCC Gene GeneID:532574|MYO5C:XM_002690963:339_cdna UTR3_Alt 2 NULL GeneID:532574 10 GENE MYO5C NULL myosin VC EMBV3_41440 GTGCATAGATGAAGAAACGGCACACACAGAGCCAGATGCCCAAGAAGAAAGATTGCTTGC Gene GeneID:504716|AHCTF1:XM_002694006:316_cdna UTR3_Alt 2 NULL GeneID:504716 16 GENE AHCTF1 NULL AT hook containing transcription factor 1 EMBV3_01999 TCAGTGAAGCCTAGAGGCATGCTCCTTGCCAAATCTCATTTCAGAATTCCTTTTGTGTCC Gene BVT0102_091739 + 0 NULL GK000027.2:33776183-33780036 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155518 TCONS_00155517 1 XLOC_094747 Coding TCONS_00155518 XLOC_094747 Coding Coding PLEKHA2 27:33772667-33779660 j TSS116345 4085 1 TCONS_00155518_1 140 3 0.416189931350114 0.00113804087845885 0.00100361309736842 0.000854040421837418 0.00073182167531927 0.000668532837817541 0.000113835313123764 0.000577587222302533 0.000665338647268017 0.000730101902749234 0.000232667766674537 2.80178224875685e-06 8.75111270815092e-07 1.03325377964796e-05 0.000266002910895249 0.000425264903929613 0.000323760152736624 8.12739516310788e-06 2.45670550790446e-05 0.000493137903193227 0.000487880787097048 8.61572523124007e-09 6.57543702159506e-05 4.04236971071591e-05 0.000309586527981478 0.000985046046108414 0.000457414918150066 0.000421268841193977 2.82159241885568e-05 8.02361066596927e-06 5.44557171431507e-05 NM_001035383.1 PLEKHA2 Bos taurus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 (PLEKHA2), mRNA. 0.0 794 100.00 0.107466340269278 NM_021623.1 PLEKHA2 Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 (PLEKHA2), mRNA. 8e-168 596 84.01 0.136352509179927 TCONS_00155518_1 sp|Q3ZBA3|PKHA2_BOVIN PKHA2_BOVIN Pleckstrin homology domain-containing family A member 2; 3e-96 288 100.00 0.992857142857143 0 noncoding 0 0 0 0 -0.469339887863585 0.259536883569534 -0.0171281887576201 0.810886365077786 CAGATCCTCAATCAAAGCTCATCAGACTGCAATAAAAACCACAGTCTGCAGTGATTCATTTAATACCCTTTGTTCCTCTCGCCTCAAAAACTGCCCTCAAGGACAGAAACCCTACTTTTTCTTTTGAACCAAGCACCAGAAGTGTAGCACACACTTAAGCAGACCGGCGGACAGTCCGGAAGACATGCACAGCTGGATTAAGGAGATCGGGGCAGCTGTCCAGGCCCTCAAGTGCCACCCCAGGGAGATGTCCTTTTCTCGGTCCATTTCTTTGACCCGCCCCGGAAGCTCCAGCCTCTCAGGGGGGCCCAACTCTATCTTGTGCAGAGGGCGGGCACCTGGGGAGGAGAGAAAGACCCTCTGCAAAGCCCCCTCCCTGGCCTCCTCTTGGCAGCCCTGGACACCCGTCCCCCAGGCCGGGGAAAAGCTGCTTCCCACCGAAGAGACTGCTGAGGACTCTTTGTTCACGCCTCGACTTGGGGAGAGCAGTACGTCTGCGGTGCTGCCCAGCTCCCGGATAAGACACCGATCGGAACCCCAGCACCCCAAGGAGAAGCCATTTGTGTTCAACCTCGATGACGAAAATATACGGACCTCTGATGTGTGATGAGGCGCGGTGCCTGGCAGGGAGGGGGTGGGCTCAGTTAAGGGGCCGTGACTCAGTGTCTCCATCTGATGCAGGACAATCCGAGACCTTCCTGGCACTTGCATCCCTGTGGAGTGGGAATCCAGCTGACTTTTTAAAGAAAATGAATGCAGTGTTTTTCATTTAGGAAGGTCACTAGGTTAGACCTCTAGGCTTGCTCAGTGTGCCTCTTGCTCGACTCTTCCACAGTCCACCTGGTGAGAGGAGGTTGGAAGTCCAGTTTCATTCCTAACCAATTTTTAGTTCCTTGTCTTTGTCTTAGCTTCTTCCCTTTGTTTTCAGGCCAGGCACAGAACCTTGAGGCCAGTCATCTGGTCTTATCTTGTTCTTATACATTGGCGGAAGTTTGACTGTGAAGTGGGAGAGTGGTAACTAACCCAACTGAAAGGGTAGAGGGGGTGGTGGTGGTTAGGGGGGTGGGGGACCCAGGCTCCAGCTTGGTCAGGATACTTTCTAAGGGACAGTCTTAAAATCTGGGGGCTTGTGGGAGGCCCCAAATGTCAACCAGGGAGATTCCCCCACTCCAGGGGACTGCCATAAGGGAAGAAATAGGGGCCTTTTGAAGATATGGGGGAATAATTCAACCCTAGTGCATCAGCCAATTTTGAGAATTACTCTTTTCTCTTTGAGATGTTCTTTGACCCCGAATACTGTCGCCATGAGAGACAGACCTGCCCGCCCCATTTCTGTGTCAGACCCTTAGGATGGGCTTATCAGTGTTCAGTGTTGAGAACAAAACAGATATTGCCCTTGACATGGTGTTAACTGAAATGCGTGGATGGTTGATGAGTGTATGGTAATTCACTTGTGTGATCCATCAGATCTCTATCTTAGAGTTTGAGAGTTGCTGTAAAGCAGATGCCAGGAAGAGATGGAATTTAGTTCACCCAGCTAAAATGCTTTGATTCATGTTTTCCCTACAGAGGAAAAAGTCTCTTTTAGCAAAGACAGATTATCTCGGGTCCTGGCCTCTCAACTCTTCTTTCATGGGCTGATACTAGTCTAGTTTTCAGTGCTGTACATGTATACCTGGCAGATTAGATTTCTTTCTGTTCTTTGTGTCGCCTTTTGGATGATGCCTTGTGTCTGTACTTGCATGATGACACCTCATCATCTGATGAGGTTCTGTGTGCTTAACACCGAGGAGATAACAAAGATAGCCTTGAGAGATATTTATATTTTTAACAAAAATAGAAACTGTGCATAGAAACATTGATTTAGAGGCTCTGCATTGCTGGCTAGAGATTTCCCAGGTAGAAGAGCATAGATTGTATTTCCCATCCTGTATTTTAGGATGTACCTTCTTCCATTTGTCAAGAGATGCTATTTCCAGGTTCCTGGAGGAATCTGTCTGTCCAGCTTATGTGGTGAACTGCTACCAGGGTTCCCTAAAGGGAGGGAATTTGACTCATTTCTGTCTATAACTTTGTATCAGCTAGATCAGTTAATTTTTGTCTTTAAATTAAAAGTTAACAAGTATAGCAGGAGACTAAGAGAAGCATTTTTACCTAAGTCAGTCCCTTCCCCACGATGTTCACATCCAACTGCAGCAAAAAACATGTAGTCAGAAAATCCTTAGTGGCTTGAGGGAAATCTGTTTCTTTCAGGCAGGGTAGTTTCCTTGTCAGGTTGTGAACTTTTCTTGACTGAACCTACTTTAGAGATAAGCTTCACTTAAATTGTTTGGCTCACTGGTCCTGGTTTGAAAAAGGAAATCTACCCTGAATTTCACTCTCTTTCTCTTTATTCTGCAGCCTCTTGTATACTTTTGTCTTAAAAACCCCTTGTTTGGGGCTTATTTATTTATGAGTAATCAGGTGACAACATATTTCAAGTCACCTGATTTCAAGAAGCCATTCCCAATTCTTCAAGTTCTTTGTCTCAGGTTTCATCTTCAAAGTTCCCACAAGAAAATTCTTTGGCTAGGTCAAAGAAAGTGCACAGAGATATGGAACTATAAAAATAAATTAGGAACTTTTGAGATCTCTTATACATTCCCTGACTCATGGAAAGATGTCATCTCTTGATGTGTCAGATGTGAAAATCTACCGATTTCCTCCTCTCTTTTCAGTAAGCTCTCTGCTAGATTACTACAGCTAAATTAATTGGCCGTTACAGTAAGCTGATCTGTTTCTTAGTAAGAGCTGTTTTGAGAATGTATTAAATTAAACATACTTATAAATCCAGATTGTATTACCATGATAGAGGGAAAACAAGGATTCTAGTTGGCAGATACTTGGGAATTCCAAGTTAGAATGTTGTTAATGTAGCTCCAATACCAGATAAATATAATTATCTTCAGTGAAGCCTAGAGGCATGCTCCTTGCCAAATCTCATTTCAGAATTCCTTTTGTGTCCATTGTTTCTTAGCCTCTGGTTAATTTCACATCATACCTTTTAACGTCACTACACGTGTGAGCCAAAGATGGTGCATATACGACCAAAGTGTTTGGTTTGAAATGTGAAAAGTGGAACCAAACGGGAAAAACAGGGCAGGATCGGTTAGTAGTTAAGTGCATAAAGGCTCTGGAATAAGTCTTGTTTCTTTAAAAAAAGGAACCAAAAAAGGTACTGCATTTTTGTGTGTGTATGGGATAAAAGCATTTTCTGAGTTGCTGTTTTTCATAAGATTTTAGATGTGGTCTTCACCCACTGTGTCTAACAGTTTCAGGTTCTTGAAAGTTAAGGATTTGCTAGCTCAGAGTCAGCTGATGGCTGGTGAACTTAGAATGGCCTTTTGCATTCTGTGAGATGACAGTCTTACTAAGATGTCGTGAAAACAGAAGAGGCACACATTGGTTTCTGAATAGAATGCTGGGCTCCCAGAGAGTCCAACTTCGTAGTTCACTTGAAGCAGAAGGTAGTGTTTTGGTTTTTCTTACCTCCCCTCCCCCACAATGTAATTGTGGTCTGTATGGACTAAAAGGATCCAATACATAAGTGGCAGATTCAGTAGCTGAACTGTGAGATTTGATATGTTTGTTTTCACTGTTAACCAGATAGACATAAGGAGGTAGTAACTAGTGTTTTGGAAATTGAGTTTCCCAAATTAGCTTTGTTTATGAGCTTCCAACATGTCAGAAATAGTTTCTACCAGCCATCGCTTTCTTTTCCCTTACTTCCTTTTTCTCTCTGTGTTATTGCCTGCAGTAGTGAATTACAGTCACTCATGCCTGGTAGAGTTTGAATAAAGCGAATATTTGGCCAAAAACCATACTGTTTGACCCCTTACCTGCTGTTCCAGAAGGTGTGGTATGATCCTGTGTTTTGAACCAGTCTGTTTCAGCTGAAATGCACTGACTTGCAGGCTGAGCTGAGTGCATGGAAACTCTTAAGCTTCTCATTTTATGTGATCTCCTAATTGGTATGTAGCAAAAATAATTTTCTAAAACTGTTTTGTTGCTTGTTTTGTAATAAAACCACGTGAAATACTGAAATA EMBV3_36145 GATCGCGACCCACCCTGATCGTTTTGTTTAACCTTAGTCACCTCCTCCTGTAGACTCCAT Gene BVT0102_229635 + 0 NULL GK000008.2:10285736-10351018 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28228 ACCAACTTAAAAAGCAGGGAAGGGTGGGGTCCAACACTGAGGGGGAGGGGCACACTAACA Gene BVT0102_202564 + 0 NULL GK000009.2:43424262-43435671 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235334 TCONS_00235331 TCONS_00235332 TCONS_00235333 1 XLOC_144212 Coding TCONS_00235331 XLOC_144212 Coding Coding BEND3 9:43394770-43427549 j TSS176428 6274 1 TCONS_00235331_3 829 0.0178514504303475 4 0.808713161266703 0.000391816171618501 0.000423135701991789 0.000711586372294462 0.00017710827505983 1.40274340057339e-09 1.10415235215731e-07 9.3877805501268e-05 2.51849887574518e-12 0.000105830040851557 3.68711679666195e-09 7.26088133114302e-08 1.49422896541023e-05 2.35093285286389e-10 4.19454950275166e-09 4.54077151776399e-09 0.00631030222249783 0.00254598029341013 0.00364964773897338 0.000384574251908114 0.000208065082408545 2.06731467821641e-05 0.00123181795766924 0.000668259976610479 0.00262228024755804 0.000430019660387612 0.000283352819272741 0.000115444925159661 0.000390221618644305 0.000383738370694941 0.000296147829737896 XM_005210787.1 BEND3 PREDICTED: Bos taurus BEN domain containing 3 (BEND3), transcript 0.0 1.127e+04 100.00 0.995537137392413 XM_005267079.1 BEND3 PREDICTED: Homo sapiens BEN domain containing 3 (BEND3), transcript 0.0 3611 86.30 0.480873445967485 TCONS_00235331_3 sp|Q5T5X7|BEND3_HUMAN BEND3_HUMAN BEN domain-containing protein 3; 0.0 1600 93.73 0.998793727382388 1 coding 0 0 0 0 -0.174834406188423 0.315442913934725 -0.0454868852859266 0.408087525191683 CCCCTACCCCCCACGTGGCGCCCCAACTCGGCGCGGGCCCGCTCTGCAAAGTACAGAACTCGTGTCCCAGTGGAACAGAAGATGAACGCAACTGAATTCAGTGAAGATGTAGAAGAAGTTCTAAAAAACAACACTGTGAAAGTGGAGACAGAGGCCGAAGATGCTGCTCTGGACTGCTCAGTGAATTCCAGGTCCGCTGAGAAGCACCCTCTGGATGGCGTCTTCACTGCTGTCCAGGACTCCAGCAAGAGAAAGCCCCTGGGTGGCGAGGGCCCACTGGACTCAGTCCCGAGCGTGAAGAGGCGGCGGCTTATTCCCGAGGCACTCCTAGCAGGCATGCGGAACCGGGAGAACAGCTCGCCCTGCCAGGGCAACGGGGAGCCGGCAGGCCGGGGCAAGAACTTGGGCTCCATGTGGCCGGGAGAGGAGGAGCCTGGCCACGACGTGAGCACGCCCTCCTACAAGAAGCCTCTGTATGGTATCTCACACAAGATTATGGAGAAGAAGAACCCTCCCGCGGGGGACATGCTCAACACCTATGAGCTCTCAGAGAAAGTGAATCCCAGCAACAGCCCCTCACCGCTGCGGCTCCTGAACGAGACACAGAAGCGGGACACTGGCGGCCCCGCAGCAGCCACAGACAGCGACCCCAACATCTACTTTCTCATCCAGAAGATGTTCTACATGCTCAACACGCTCTCCTCCAACATGTCGCAGCTGCACAGCAAGGTGGACCTGCTCTCCCTGGAAGTGAGCCGCATCAAGAAGCAGGTGAGCCCCACTGAGATGGTGGCCAAGTTCCAGCCGCCGCCCGAGTACCAGCTCACGGCGGCCGAGCTCAAACAGATCGTGGACCAGAGCCTGTCGGGTGGTGACCTGGCCTGTCGCCTGCTGGTGCAGCTTTTCCCAGAGCTCTTCAGCGACGTGGACTTCTCCCGGGGCTGTGGCGCCTGTGGCTTCGCGGCCAAGCGGAAGCTGGAGTCGCTGCACCTGCAGCTCATCCGGAACTATGTGGAGGTCTACTACCCATCGGTGAAGGACACGGCCGTCTGGCAGGCTGAGTGCCTGCCCCAGCTCAACGACTTCTTCAGCCGCTTCTGGGCCCAGCGGGAAATGGAGGACAGCCAGCCCAGCGGCCAGGTGTCTGGCTTCTTCGAGGCCGAGCCCCAGGTGGATGCTGGCCACTTCCTGGACAGCAAGGAGCAGGAGGAGGCCCTGTCCCTGGACCGCAGCAGCACCATCGCCTCTGACCATGTGGTGGACACGCAGGACCTCACCGAGTTCCTGGACGAGGCCTCATCCCCGGGCGAATTTGCGGTCTTCCTTCTGCACCGGCTGTTCCCTGAGCTCTTCGACCACAGGAAGCTGGGCGAGCAGTACAGCTGCTATGGGGATGGCGGCAAGCAGGAGCTGGACCCGCAGCGTCTACAGATCATCCGCAACTACACAGAGATCTACTTCCCCGACATGCAGGAGGAGGATGCCTGGCTGCAGCAGTGTGCCCAGCGCATCAACGACGAGCTGGAGGGCCTGGGGCTGGACGCGGGCAGCGAGGGCGAGCCCCCGCGAGACGACTGCTACGACTCATCCAGCCTGCCCGATGACATCTCCGTGGTCAAGGTGGAAGACAGCTTCGAGGGCGAGCGGCCCGGCCGGCGGTCCAAGAAGATCTGGCTGGTGCCCATCGACTTCGACAAGCTGGAGATCCCGCAGCCCGACTTCGAGGTGCCGGGCGCCGACTGCCTGCTGAGCAAGGAGCAGCTGCGCAGCATCTACGAGAGCAGCTTGTCCATCGGCAACTTTGCCTCGCGCCTGCTGGTGCACCTGTTCCCGGAGCTCTTCACCCACGAGAACCTGCGCAAGCAGTACAACTGCAGCGGCTCCCTGGGCAAGAAGCAGCTGGACCCGTCCCGTATCAAGCTCATCCGCCACTACGTGCAGCTTCTCTACCCACGGGCCAAGAATGACCGTGTCTGGACACTGGAGTTCGTGGGCAAACTGGACGAGCGCTGCCGGCGCCGGGACACGGAGCAGAGGCGCTCCTACCAGCAGCAGCGCAAGGTCCACGTTCCGGGCCCTGAGTGCAGGGACCTGGCCAGCTATGCAATCAACCCTGAGCGGTTCCGGGAGGAATTTGAGGGGCCCCCGCTGCCCCCCGAAAGGAGCAGCAAGGACTTCTGCAAGATCCCCCTGGACGAGTTGGTGGTGCCCTCGCCCGACTTCCCGGTGCCTTCGCCGTACCTGCTGTCCGACAAAGAAGTGCGCGAGATCGTGCAGCAAAGCCTCTCCGTGGGCAACTTCGCCGCCCGGCTGCTCGTCAGGCTCTTCCCCGAACTCTTCACCACCGAGAACCTGCGGCTGCAGTACAACCACTCCGGGGCATGCAACAAGAAGCAGCTGGACCCCACACGCTTGCGGCTCATCCGCCACTACGTGGAGGCCGTGTACCCGGTGGAGAAGATGGAGGAGGTGTGGCACTACGAATGTATCCCGAGCATCGACGAACGCTGCCGCCGCCCCAACAGAAAGAAATGCGACATCCTGAAGAAAGCCAAGAAGGTGGAGAAGTGAGGGGTACCAGGGGCACTGAGCGTCGCCCCTACCCCCCACCACCACGAGCCCGAGCCGCGTCCGCAGCCGCGCACGTTATATCGGCGGGGCGGGGCCTGCTGCATTTGCACACGCGATCGCCCAGCCGGTCACGGCCACACAAAGAAGCCTCGCATTTGGTCTCTTGTACTTAAAACTTTTGTCCTGTGTTCCTGTGGTGCAGCCAGAGCCTGGGAGAGCAGAGCTGCGAGGGCAGAGGGGCCGTCAGGGTTCCCTCTCCTCAGCAGTTGTCCTCCCAGTCCCCTCACCATTTGAAATGCAAATCAAGCAACCCTCTTGTTCCTCTGCCCACATTTTACGTCTTCAATTTTTATTAAAAAAAATTTTTTTTTTTTAATTAAAAAGAAACCCTTTTTAAGTAAATCATTGGGCTCTGTGGAGGCCATTTTACTCAGAAAAAAATTTTTTTTTCTTTAATATTTGAGATGTACTGTAAGATGACTTGAGTCACTGGGAATTTTTTTTAAGATGGTTTCAGATATATGAAATTTTTAGAAGTGCCATGTTCATGCATGATGGCTGATAGCTTCAGGGGGCATAGAGACGGATTTTACTGACCTTGTCTTTTATTAATACATCGGATTTTGGAAGAGTCAGGACGCCTCTTGGATGGCGGTGGAGGGGATGGGGTAGCTCGGTGTCCTTTCTGGCCACGGTCAGTTGCTCGCTCCCTCCCACTGTGGTGCTGAGGAAGGGGCTGCGGGGACGGCTGGCCTGGCCTGTCTCACCCTGCTGTGCCAGGTGAATGTTGCTCACCCTGTAGACAAGAACACTGGATGGTGATGATGGTGATATGAATGTAGATAGACGTGGAGACACGTTCACAGTGTCTTCATTTGAGCTGTGTCCTTCCACTGCCCTCTTTCCTTCCTCCTCAAGGATGCTGGTTAGAGGGGCAAACATTTCCTTGGAAAACTGTGTGTGGTTATTTGGCTTCTTGTTTAAGGATGGGCCCCATTGGGCTCACTGAGAACTGTTTACTTTCCATGTGTGTATTTGTATAAAACCCAGGTTCTGGGAGCTGTATGGTGGCTTCACCACACCTCAGTGTTGGCTCCTCCAGTCAGTACACATCCTTGTTCCTCAGGGCCGGGCCTAAACCGTGGCCTGTCTTGAGGATACCTGGTGTTGGAAGGACACAGGCCATCCGAAATAGGGCTCCCATATCCCTTTCCGGGGTCCACTCAGAGCTTTCTCTTTCGGCCCCCAGAAGGTCCTGCTCTCCTACATCTGGCCGGTCCCTCGGCCTCAGGATGAGACACCTCTTTTCTCTTCCCTGGTTGGGAAGGTCACACTGCTCCAGGCCAGTGGCATGCTCTCCAGGATTCCAACCAGGAAACTCCCCAACAGGTAAAGTCCTTAATGTAAAAACAGTACTTTTACCTACCTGACTTTGGGGGCTAGTGCCTAAGAGGGAAAGGGAACAGTCTAAACACAATACATTATACCAGAAAGCAAGAAAATAAATTGAATCACACAGGGTAGTCGTAAAACCCTTGTGGAATGTTAATTTAATAACCTAATGGCTTAATATTTTGCTACCTTAAAATGCAGAAATAATAGAAACAATCTGTGAATTCTTTTCATACAGATAAGGACTTCAGCATTACTGACTGATGGAACTTTGCCTGCACTCGCGGCCATTTTTTTTTTTAATGCCAGGATTCTGAGCAGTGTGAAGTTGCCGATCTAACTTTAGTAAATCTGCTTTTAAATGTCATTTACAGATTATTTCAGTTGTTAACTGCGGACCTAAATTATTACAATTTGGAAACACACAGGGACTTAATGACTCTTTCTCACCCACCCACATACATGTGTACACACACATTTCTTAGTAAAAAACTGAAGTGAGATGAAGGGGACCGACATGAATAACAAGCTCAACCTCTTTGTGCCTGGAAAGGAGGAGGACTGGAGCAGCCGGAGACTCACTTCCCCCTCTCCTGGGCCTTTCTCTATGCCTTAGTCTCTCCAGCACACAGATGCATGCCTGCGTGCATGTGCGTGCACACACACCCAAAGATGGCAGTGGCACTCTCTCCCTCACCGGGATCCTGCGAGTGGGAGGGTGCTGTGGAATTTGTTCTGGTCTCTAGGATGTATCCAAGAGGATTCCAAGCCATGTGAAAATTGCCCTGCTTTCTAGAGGGTGGAATGTGACCCTGCAACTTCAGAAGCACAATCATTTAATAATTTTTTTTTAATCATCCTGTCTACCCACAAGAGACATCAACAGGTTCTAGGAATTAAATATATCTCTTTACAACCTAGAGCATGTCCAGTTTTTGGAAACTGTGTTTTGATGGTTTCTTTAATACCTTTCCTGTATGGGGCTTCTTCCCCCAAATCTTAGAGTCCCTTCCAGTGAAGAGAGGTGGACGCTCTCTGTGAGCTGTAATCTTGTCTCTCTGGACCGACTCACCAGGAACCACCTGCAGGTCCTGAGTCTGTCTGCGTGGTGTCCTCAGCCTCCAGCCATACAGGTGGGCTCCAGGGGCTTTTTTTTTTTTACATGAAGCAATAGAATTATAAAATACCTAAATTTTTTTCAAAATGTAATGTTTTCCATAATCTGTTGGCAAAATCCCTACTCCCTCCCCATCTAAATTCTTTGATTTTTGTTAATACTTGCTTGTGTTTGGGGAATTTTTTCTCCCTCACATCCAGAAGTAGCACAGACACATTCTGATATTGAGTAAAATAGCACGTCACAATAGGTGGTAGTGTCCCTCGTTTTTCTGTTAGTGAGTTTTAAAAGAATGTACGAAGATAGTCATGAATGTACTAAGTGTTCTAATCCTGCTTCCGTTCACTTTGGCTGTGTCTACATGACAACACAGGTTTGACAGGGAATAAAGTTGTGCCCAGTGTCATGGGTGTTAGTGTGCCCCTCCCCCTCAGTGTTGGACCCCACCCTTCCCTGCTTTTTAAGTTTGGTGGGAGGGGGTACCACATCAGCAGCAATCATCAACCAACCAATGGGATCTACTTAGTGGTAAGTGGATTAACTGTTTAAATGCTAAGAGTCACTGGCCTGACCACACCATAGTATGGCCACTTGGGTTCCTGCAGACATGGCTTCATTTTCCACCTTTGCCCCAAATGTTTACTTCTTGCCTGATTGAGGAGGAGGGTCTCAAGACCTCAGATTGGAGGCCATTGAGCTCTTAACCCTGCCTCACCATGGAGAGAGATGCTATGAAGTGGTGGGACTTCCCTGGTGGTCCAGTGGTTACCACTCCCTGCTTCCACTGCAGGGGGCACGGTTTCTATCCCTGGTCAAGGAACTAAGATCTCACATGCTATAGGGCCAAAAAAGAAGTGGGCCCCTGGGCCAAGGGACTCTTAATGTCGTTCAGAGATACTTGTCTCTTGTAGATCCAGCCTTAATGTTTTTCTGACATCCTAGTGATAGCAGACCCTGCGCAAAGTGGATATCAGAGTTAATACTGTGAGGAGACAAAATAATGAGAATAGTTTTACCAAAGATAATGAAACATTGCATAATGTCTGCATTTTACCATTGATTTGAGTGCACCCTTAGAAAACTGAATGTAACAAAAACCCAGGACATTTTTTGGAAATTGTATGCTCTCTAGCAACTGTGTGAATTTTTATACAAGCACTGTTTTATGAGCTATATAAAATGTTATAAAAATAC EMBV3_30727 TGTGTGATACAGGCCCTCTGTTCAGTCCTTAAACTCAGTGCTTGGGGAAAGGAGTCTGTG Gene GeneID:511861|SERINC3:NM_001083412:994_cdna Constitutive 1 NULL GeneID:511861 13 GENE SERINC3 MGC139788 serine incorporator 3 EMBV3_02466 GTGAAGAGCTAAAGAAAAAACCTGGCACTTCGCTAGAGAGAACACCTGTTCCCAGCGCTG Gene GeneID:539947|LOC539947:XR_084696:154_cdna Constitutive 0 NULL GeneID:539947 6 PSEUDO LOC539947 NULL similar to Dvl-binding protein Idax EMBV3_28493 GAACCCAGGAATAGCACCCATTTACAGACAGCCCACCAGAATACTTGTCTTGCCAATCCC Gene BVT0102_181062 + 0 NULL GK000015.2:47235667-47245397 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00064842 1 XLOC_039566 NonCoding TCONS_00064842 XLOC_039566 NonCoding NonCoding - 15:47242897-47243320 - TSS48585 423 2 TCONS_00064842_1 39 1 0 3.21647278638694e-05 0 0 0 0 0.000363624843231242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NM_174516.2 CHRNB1 Bos taurus cholinergic receptor, nicotinic, beta 1 (muscle) (CHRNB1), mRNA. 4e-14 82.4 84.81 0.179669030732861 0 noncoding 0 0 0 0 0.0416733254714587 0.782515292153418 -0.167830194321938 0.0832105813713208 TTACAGCTCATAGTTTTATTCAGTAAACAAAGGATAGTACACCCCCCAGGCGTGAGGGTGGAGATCCCAAAGGAGAGGCCTGTATGTACATCTTAACTACACTTAACTGTATGTTTGCATCTTAACTAATTAGATGCCTTTCCCCATCTTCACCATCTACCTGTGATTATCATCTCTGATTACCTGAAGAGACATCCCTGGATATTACAGCCATCCTGCTTAATGGGATTGGCAAGACAAGTATTCTGGTGGGCTGTCTGTAAATGGGTGCTATTCCTGGATTCTTTTTTCATTTGCTCAAGCAGAAATCTGGAAGTCATCCTTTCCTTCATTTTACCTTAGCCAATCAATTAATCACTAATTGTTGAGTTCTTTCTCCTGAATATTTATTAAAGCTATGCAATCTTCTCCATCCCTAATCCC TCONS_00059343 TCONS_00059344 . 5' 2078 TCONS_00059343 TCONS_00059344 . 5' 2078 EMBV3_22917 ATGAGGATCGGCAAATACCAGAAGCCAGTGCTGGCTACCTGTGGTGCGCTTCATCGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16235 CACACACAGTTACTGGCCAAGACAATTGAAATTGGCCTGCAAGGTGATGTGACTGATCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43264 CCTGGTCAGGGAACTAGACCTCACATGCTGCAAGTGAGGATCTGAATGTTGCGACTTAAG Gene BVV0102_011506 - 1 EMBV3_27440 GK000003.2:121111325-121118651 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180670 1 XLOC_110437 NonCoding TCONS_00180670 XLOC_110437 NonCoding NonCoding - 3:121113849-121114326 - TSS135429 477 0.335429769392034 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00011074055242594 0 5.26012642989683e-05 0 0 0 0 0 0.000351458870363402 0 0 0 0 0 0 XR_138724.2 LOC100847870 PREDICTED: Bos taurus uncharacterized LOC100847870 (LOC100847870), 6e-19 98.7 75.69 0.29979035639413 0 noncoding GCGTCTGCTGATAGAGCGTGGCAGGCTGGCCTTGGGGGCTCTGCGCCCACGTGTGAGACGAACCTGGATTTACAGGGTTTCTGTTCCTACTTCTCTATCTGGCTGCGCTGGGCCCTCGCGGTGGCTGCGCTTTGATCCTCCTTGTGGCGTGTGGGATCTTAAGTCGCAACATTCAGATTCTCACTTGCAGCATGTGAGGTCTAGTTCCCTGACCAGGGACGGAACCCAGGCCCTCCGCGCCGGGAGCGCAGAGTCCCAGCCCCTTGGCCACCCGGGAAGTCCCTGTTTCACACGATTGACAACAGGGTCACGTCCGTGTTTTGCATAAGCAAAGCTAACTTCAGAGAAACAGTTTTAGAAGTAAATGAGTTTGTATGCTGATTGGGAGACATAAGCAGCCAGAGAAATTAGTTATTCCAACTATAATATTTTTTAACATTATATACTCAGTGTGAAAGCTGTAAAAACAATAGCAAA TCONS_00171652 . 3' 2524 TCONS_00171652 . 3' 3000 EMBV3_09510 ACCCTTACCTGGAAGACTCTGTGTGTCATATCTGCAGCTCCCAGCCTGGCCCATTCTTCT Gene GeneID:514174|CPEB1:XM_002696587:27_cdna Constitutive 0 NULL GeneID:514174 21 GENE CPEB1 NULL cytoplasmic polyadenylation element binding protein 1 EMBV3_04372 TGGTACCTGTGCATCCTGCTGGGCTTCCAGGCTGCCGCTGTTCCAGGCCAGTGCCTTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18970 AGCCTTTAGTCAATCCTCAACTCTTACTAAACACCGGCGAATTCATACAGGAGAGAAACC Gene GeneID:788860|LOC788860:XM_002695330:47_cdna Constitutive 0 NULL GeneID:788860 18 GENE LOC788860 NULL similar to Zinc finger protein 43 (Zinc finger protein 39) (Zinc protein HTF6) (Zinc finger protein KOX27) EMBV3_21924 GCTACCGAGAGGATCCAGGGAGGTGGAACCCCTGGGTGGCTTCATGAGCACAGCCGAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14369 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01692 CTGCAACTCTTGTTAGCAGATGAAAGCAGCATCTGAATATTTGTCGACCAAAATGATGCC Gene GeneID:510568|XPO1:XM_002691374:244_cdna Constitutive 2 NULL GeneID:510568 11 GENE XPO1 NULL exportin 1 (CRM1 homolog, yeast) EMBV3_32135 CCATCGACGGCTTAGAAGATGACCATGTACGACAACTGTTTGGACCGATCGACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_39916 AGACCAACGGCAACTACCTGGCCCTGTTCTCCGCTGTGTGGCCCTACCGGATGAGCAGAA Gene GeneID:527651|WDR25:XM_002696770:451_cdna Constitutive 0 NULL GeneID:527651 21 GENE WDR25 NULL WD repeat domain 25 EMBV3_16314 ATTGTGCAAAACTTGAAAGACCCAGCCAGAAGACTATGGGGTTCAGGATCCACTAGGCGG Gene BVV0101_003849 + 0 NULL GK000003.2:80912874-80917077 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170387 TCONS_00170389 TCONS_00170385 TCONS_00170388 TCONS_00170391 TCONS_00170392 TCONS_00170390 TCONS_00170386 TCONS_00170393 1 XLOC_103574 Coding TCONS_00170390 XLOC_103574 Coding Coding JAK1 3:80775556-80915026 = TSS127328 5078 1 TCONS_00170390_6 1158 0.0124064592359197 25 0.963769726605912 0.0111463027247545 0.00948457970966621 0.00801134059641917 0.00785854975695537 0.0074135904235521 0.00330766174723668 0.00487622578049171 0.00501502834672809 0.00724653199906957 0.00126944117908446 0.000170404240553866 0.000258423871390098 0.00112634711547818 0.00318371643175266 0.00166804795945908 0.00664202381903715 0.00222762328423638 0.00651954359877054 0.0106179437470704 0.010318894523557 0.00395901737189556 0.00280978598665005 0.00233327750253748 0.00293215241912176 0.0116619526851488 0.00814748176299649 0.00628463723986251 0.00098906647292747 0.000330536536728963 0.000838604620341577 NM_001206534.1 JAK1 Bos taurus Janus kinase 1 (JAK1), mRNA. 0.0 9149 99.96 0.99980307207562 NM_002227.2 JAK1 Homo sapiens Janus kinase 1 (JAK1), mRNA. 0.0 6049 86.71 0.983851910200866 TCONS_00170390_6 sp|P23458|JAK1_HUMAN JAK1_HUMAN Tyrosine-protein kinase JAK1; 0.0 2314 97.14 0.994818652849741 2 coding 0 0 0 0 -0.0146496561204476 0.948836354035385 0.00685881229531986 0.892099065863108 AGCGCAGGCCGCGGCGGCCGCCGAGTAGTTAGCCGCCGTAGACTTACCCCGGCCCGCACCGAAAAGGTGATTGCCAACCCTGCGCCCACTCCTCAGCCCCCGGCGCGTAAACGCCGGGGCCCTGGGGGGTTAGCCGCTTAGGGAGCTGGCCGCCCGACCCTGACCCTCGCAGTGACCCAGAGCCCCCCGGCCCAGGCGCACACGGAAGTGCTCAGCTCTGAATGGGTTTTGGAAAGTAGAGAAGAAAATCCAGTCTACATTTTAGGGGACATTGGACAGCCGGATAAATGCAGTATCTAAATATAAAAGAGGACTGCAGTGCCATGGCTTTCTGTGCTAAAATGAGGAGCTCCAAGAAGGCGGAGATGAATCTGGAGGCCCCTGAGCCGGGGGTGGAGGTGCTCTTCTACCTGTCGGATAGGGAGCCTCTCCGGCTGGGCGGTGGAGAGTACACGGCGGAGGAGCTGTGCATCCGGGCGGCGCAGGAGTGCTGTATCTCTCCTCTGTGTCACAACCTCTTTGCCCTGTATGACGAGAACACCAAGCTCTGGTATGCTCCGAATCGCACCGTCACCGTCGACGACAAAACGTCACTCCGGCTTCACTACCGGATGAGGTTCTATTTCACCAACTGGCATGGGACCAACGACAATGAACAATCAGTATGGCGACATTCTCCAAAGAAGCAGAAAAACGGCTATGAGAAAAAAAAAGTTCCAGATGCAACACCTCTCCTTGACGCCAGCTCGCTGGAGTATCTGTTTGCTCAGGGACAGTATGATTTGGTCAAATGCCTGGCTCCCATTCGAGACCCCAAGACGGAGCAGGATGGGCACGACATTGAGAACGAGTGTCTTGGGATGGCCGTGCTGGCCATCTCCCACTACGCCATGATGAAGAAGATGCAATTGCCAGAACTCCCCAAGGACATCAGCTACAAGCGATATATTCCAGAAACATTGAATAAGTCCATCAGACAGAGGAACCTTCTCACCAGGATGCGGATAAATAATGTTTTCAAAGATTTTCTAAAGGAGTTTAACAACAAGACCATTTGTGACAGCAGCGTGTCCACGCACGACCTGAAGGTGAAATACCTGGCTACCTTGGAAACTTTGACAAAACATTATGGTGCTGAAATATTTGAGACTTCCATGCTACTGATTTCATCAGAAAATGAGATGAATCGGTTCCATCCAAATGATAGTGGAAATGTTCTCTGCTATGAAGTGATGGTGACTGGAAATCTTGGAATCCAGTGGAGACAGAAACCACATATTGTTCCTGTTGAAAAGGAAAAAAACAAACTGAAACGGAAAAAACTGGAAAATAAACACAAGAAGGATGAGGAAAAAAACAAAATCCGAGAAGAGTGGAACAATTTTTCTTACTTCCCTGAGATCACTCACATTGTAATCAAGGAGTCTGTGGTCAGCATTAATAAGCAGGACAACAAAAAAATGGAACTGAAGCTCTCTTCCCACGAGGAGGCCTTGTCCTTCGTGTCCCTGGTCGATGGCTACTTCCGGCTCACGGCAGACGCCCATCACTACCTCTGCACTGACGTGGCTCCCCCATTGATCGTCCACAACATACAGAATGGCTGTCATGGTCCAATCTGCACGGAGTATGCCATCAATAAGCTGCGGCAGGAGGGGAGCGAGGAGGGGATGTACGTGCTGCGGTGGAGCTGCACCGACTTTGACAACATCCTTATGACCGTCACCTGCTTCGAAAAGTCTGAGGTGCTGGGTATCCAGAAACAGTTCAAGAACTTTCAGATCGAGGTGCAGAAGGGCCGCTACAGCCTGCATGGCTCGGACCGCAGCTTCCCGAGCCTTGGGGACCTCATGAGCCACCTAAAGAAGCAGATCCTGCGCACGGACAACATCAGCTTCGTGCTGAAGCGCTGCTGCCAGCCCAAGCCCCGAGAAATCTCCAATCTGCTGGTGGCCACCAAGAAAGCCCAGGAGTGGCAGCCTGTCTACACCATGAGCCAGCTGAGTTTCGATCGAATCCTCAAGAAAGATATTACGCAAGGCGAGCACCTTGGGAGAGGCACGCGGACACACATCTACTCTGGGACCCTCACGGATTACAAGGATGACGAAGGGACTTCTGAAGAGAAGAGAATAAAAGTCATCCTGAAGGTCTTAGACCCCAGCCACAGGGACATTTCTCTGGCCTTCTTTGAGGCAGCCAGCATGATGAGGCAGGTCTCCCACAAACACATCGTGTACCTCTATGGGGTTTGCGTCCGAGATGTGGAGAATATCATGGTGGAAGAGTTTGTGGAGGGGGGACCCCTGGACCTCTTCATGCATCGGAAAAGTGACGTCCTCACCACACCCTGGAAGTTTAAAGTTGCCAAACAGCTGGCCAGCGCCCTGAGTTACTTGGAGGATAAAGACCTGGTCCACGGAAATGTGTGCACTAAAAACCTCCTTCTGGCCCGCGAGGGCATCGACAGTGAGTGCGGCCCCTTCATCAAGCTCAGTGACCCTGGCATCCCCATCACTGTGCTCTCCAGGCAAGAGTGCATAGAACGAATCCCCTGGATTGCTCCCGAGTGTGTTGAAGACTCCAAGAATCTGAGTGTGGCTGCTGACAAGTGGAGCTTTGGAACCACACTCTGGGAAATCTGCTACAATGGCGAGATCCCCTTGAAAGACAAGACGCTGATTGAGAAAGAGAGATTCTATGAAAGCCGGTGCAGGCCAGTGACCCCATCTTGTAAGGAGCTAGCTGACTTGATGACCCGCTGCATGAACTACGACCCCAACCAGAGACCCTTCTTCCGAGCCATCATGAGAGACATCAATAAGCTGGAGGAGCAGAATCCAGACATTGTATCAGAAAAAAAGCCAACAACTGAAGTGGATCCCACACATTTTGAAAAGCGGTTCTTAAAGAGGATCCGTGACTTGGGAGAGGGCCACTTTGGGAAGGTCGAGCTCTGCAGGTATGACCCTGAGGGGGACAATACAGGGGAGCAAGTGGCTGTCAAATCCCTGAAGCCCGAGAGTGGAGGGAACCACATCGCTGATCTGAAGAAGGAGATTGAAATCTTAAGAAATCTTTATCATGAGAACATTGTGAAGTATAAAGGCATCTGCACAGAAGATGGTGGAAATGGTATTAAGCTCATCATGGAGTTTCTGCCTTCAGGGAGCCTTAAGGAATATCTTCCAAAGAATAAGAACAAAATTAACCTCAAACAGCAATTAAAATACGCCGTTCAGATTTGTAAGGGGATGGACTATCTGGGTTCTCGGCAGTACGTTCACCGGGACTTAGCAGCAAGAAACGTCCTCGTGGAGAGTGAGCACCAGGTGAAAATCGGGGACTTCGGTCTCACCAAAGCCATCGAAACCGATAAGGAGTACTACACAGTCAAGGACGACCGGGACAGCCCTGTGTTTTGGTATGCTCCAGAATGTTTAATTCAGTGTAAGTTCTATATCGCCTCTGATGTCTGGTCTTTCGGAGTGACTCTGCATGAGCTGCTTACTTACTGTGATTCAGATTCCAGTCCCATGGCCTTGTTCCTGAAAATGATAGGCCCAACTCATGGTCAGATGACGGTAACAAGACTCGTGAATACATTAAAAGAAGGAAAACGCTTGCCATGTCCACCGAACTGTCCAGATGAGGTTTATCAACATATGCGAAAGTGTTGGGAATTTCAACCGTCTAATCGGACAACCTTTCAGAACCTTATTGAAGGATTTGAAGCACTTCTAAGAAGCATGAGTAACATTTAAATTCTAATGTGTCCTCCTACCCCCAACCAGTACCCAAGCCATTTACAAAAATTGTTACTGGAAAAAAAGTTTGTATTCTGTCTAAAAAGATACCAGGGTACGTATCCATATATAAGGCACATATTAAGCATATTACACATGCTTAACATGTGTAAGTACTTCTTCTTTAAATTTGATACCTGTAACATAGTGACAACCAAAATATTGGAAAGCACTTAAGCACTCCTCCTTTTGGAAAGACTATATCACTGTTTGGTTAGTTTACCATCACAGTTGAAAACCAGAATGGGATTTCTCAAAACAAGAGGAGCTGACCAAAGTAGAGTCTCAAGATGATTGCTTTTTCTTAGCTGCCAGTTGATATGAAATAAATATTTTTCTGGCACATAAAGATAAGGATTGATGAATTTAGCCAATACTCTAATATGCCCTCAAATTTCAATATCTATACCATGATAGATGAAACATTCTTGAAATATAGATACCAGTTAGTATACTATTGTCTCTATACAAAGATGAGTGTATTCCTGTCAACAGTAGGACATAAACTTTGAGTTGTTTTTGCAGTGGCTTAGCTCCTGTCCCCTTGGGTGACCAGTGGTACCCATTTTTGAGAAGACTGGTCATACATACCCAGAGGGGCAGCTGTGGAATAGACACTTTGCTGCATGACATTAATTCTTGAGAACTAAACCTGTGCCAGTGCTTCCCTAAACAGTATACCCTTTAATCAGAACCGAGGCCAACAACCTGCATACATGCTTTTCAGAAATGTCAGTGTATATCCTTTTGTAACTCTACCACTTTGGGGCAAGCTGTTCCAGAATTGGTTCTGGATGCTGATTGCAAATATACCATGTACATTGCACTGTTCTTAGAGTGTTTCAGTACTTACCATACATCTACAAGAGTCGATCACTATTTTGACCATCACCCTATTGTGCAAAACTTGAAAGACCCAGCCAGAAGACTATGGAGTTCAGGATCCACTAGGCGGTTTTCAGTTTGCTTGGAGACTGCTGGGTAATCAAAATGTCAAATCTGATTCAATGTGAACTGTAGATCTTTTTTGACCAAGAGTCTGCAAAACTTTCTGTTGATGCTGTCTATTATTTGTTTGATATCATTATTTTTCCCCCTTGATCCTGAAAAGAGTTTTATGTATTGATTGGATGGCAGCAATAAACTTGCCATTTATAAATCTGTTCAATAACCCTGCATCACAAATGTCTCTGTCTGTATCAAACCTGTGGCCACTCTCTATGCACTTTGTTTACTCTTTATACAAATAAATATATGGAGCCTTCACATGCA EMBV3_08199 ATAACCAGGAGGCTTTGTCGGAGGATAGAGACGGCAGTTAAGAAATTTAGGGGCCAAAAG Gene GeneID:514239|TNFSF15:XM_002689944:109_cdna Constitutive 0 NULL GeneID:514239 8 GENE TNFSF15 NULL tumor necrosis factor (ligand) superfamily, member 15 EMBV3_11314 TCAGAAGCTGCTAGCCTGCCTTTGAAAACAGAAGAGTTATGGAAAAGTTCAGTTTCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40377 AAACACACCTACTGCAATCAAGAAAAAGTCACCGTGTCTGCTTAGGATATTCAACCTAAG Gene BVV0102_163624 + 0 NULL GK000007.2:47401413-47425979 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07741 AGGTTGATACAGCTGCCCACTTCCTCTCCTTGGTGGGTTAGCACTCACAGGTCCAGGAAA Gene GeneID:528912|TRIM63:NM_001046295:200_cdna Constitutive 0 NULL GeneID:528912 2 GENE TRIM63 MGC137423 tripartite motif-containing 63 EMBV3_41621 CGTGGAATTGCCATTTGACAACTGTGACCAGGTAGTCTGGACCTTAGAGTCAGATCAGCC Gene BVV0102_188861 + 0 NULL GK000015.2:74321504-74332059 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059979 TCONS_00059982 TCONS_00059978 TCONS_00059980 1 XLOC_036552 Coding TCONS_00059978 XLOC_036552 Coding Coding API5 15:74292933-74322978 j TSS44904 3625 1 TCONS_00059978_3 378 14 0.879809612568233 0.000539110942304285 0.000174207167170356 2.11267513985991e-08 0.00120307142636004 0.000852346221592564 0.000834945419729029 0.0023370778355604 0.00228794293607845 0.00506151892006268 0.000532370426929056 0.000599775258344904 0.000684649932917792 0.000160816011983995 0.000509815633167724 6.14375239844011e-05 0.00191830702945961 0.000896026506297054 0.00597616083603439 0.00559055088744449 0.00488793508272414 0.000273428408515225 0.000603375651238699 0.00101012613220195 0.00172034409937327 0.000265094360035345 0.000661248043783226 0.0010109198389589 0.000893763320857291 0.000466023067987151 0.00053644195701517 NM_001144083.1 API5 Bos taurus apoptosis inhibitor 5 (API5), mRNA. 0.0 3831 99.95 0.58648275862069 NM_006595.3 API5 Homo sapiens apoptosis inhibitor 5 (API5), transcript variant 2, 0.0 4635 88.92 0.988137931034483 TCONS_00059978_3 sp|O35841|API5_MOUSE API5_MOUSE Apoptosis inhibitor 5; 0.0 752 97.35 0.997354497354497 1 coding 0 0 0 0 -0.448638565169472 0.156980908834734 -0.388786549373266 0.0246028122242043 GGCTCGTCGGTCTATGGCATTTCCCAGCATAAAGATGCTTATCAAGTGATATTGGATGGTGTCAAAGGCGGTACCAAGGAAAAAAGATTAGCAGCTCAGTTTATTCCAAAATTCTTTAAGCATTTTCCAGAATTGGCCGATTCTGCTATCAATGCGCAGTTGGACCTCTGTGAAGACGAAGACGTATCGATTCGACGGCAAGCAATTAAAGAGCTGCCTCAGTTTGCCACTGGAGAAAATCTCCCCCGAGTGGCAGATATACTAACCCAACTTTTGCAAACAGATGACTCTGCAGAATTTAACTTAGTGAACAACGCCCTCTTAAGTATATTTAAGATGGATGCAAAAGGGACTTTAGGTGGCTTGTTCAGCCAAATACTTCAAGGAGAGGACATTGTTAGAGAACGAGCAATTAAATTCCTTTCTACAAAACTTAAGACTTTACCAGATGAAGTCTTAACAAAGGAAGTAGAGGAACTTATACTAACTGAATCCAAAAAGGTGCTAGAAGATGTGACCGGTGAAGAATTCGTTCTGTTCATGAAGATACTGTCTGGGTTAAAAAGCTTACAGACAGTGAGTGGAAGGCAGCAACTGGTAGAGTTGGTGGCTGAGCAGGCTGACCTGGAACAAACCTTCAACCCCTCAGACCCTGACTGTGTGGACAGGCTTTTACAGTGCACTCGGCAGGCGGTACCCCTCTTCTCTAAAAATGTTCATTCCACAAGGTTTGTGACTTATTTCTGTGAGCAAGTTCTCCCTAACCTCAGTTCCTTGACTACCCCAGTGGAAGGTCTTGATATACAGTTGGAGGTATTAAAACTCTTGGCCGAAATGAGTTCATTTTGTGGTGACATGGAAAAACTAGAAACAAATTTAAGGAAACTATTTGATAAGTTATTGGAGTACATGCCTCTCCCTCCAGAAGAAGCAGAAAACGGGGAGAATGCTGGTAATGAGGAACCCAAGCTGCAGTTCAGTTATGTGGAATGCTTGTTGTACAGCTTTCACCAGTTGGGCCGAAAACTTCCAGATTTCTTAACAGCTAAGCTGAATGCAGAAAAGCTCAAAGATTTCAAAATCAGGCTGCAGTACTTTGCACGGGGCCTGCAGGTTTACATCAGACAACTCCGCTTGGCTCTCCAAGGCAAAACAGGCGAGGCCTTAAAAACAGATGAGAACAAGATTAAAGTCGTTGCATTGAAAATAACAAATAATATTAATGTTTTAATCAAGGATCTCTTCCATATTCCTCCTTCTTATAAGAGCACAGTAACATTATCCTGGAAGCCTGTACAGAAGGTTGAACTTGGGCAAAAGAGAGCCACTGAAGATACAACTTCAGGTTCACCTCCCAAGAAATCTTCAGCAGGACCAAAAAGGGATGCCAGGCAGATTTATAATCCTCCTAGTGGGAAATATAGCAGCAATTTGAGCAACTTTAATTATGAGAGGAGCCTTCAGGGGAAGTAGAGGTGGCCGAGGTTGGGGAGCACGAGGAAATCGTAGTCGGGGAAGACTCTACTGAATGAGAAGTCACATTCTTCAGCATTGTCATGAGCTTATATACTTAATTCTACTACTCATTGGATTGCCGGGGGTGTCCCTTTAAAAAGACTGCTGCCTTCAGCTAAAAACTTACTGTTCTTTATACCTTTGTATGTATGATCTACTTTTGTAACAAACCATGGTTGTGTCCAAGGTAAAAACCACAGCGATATTTTTGGATGCTTTGTCTGCAATCTTTACTTGTTTTTGCAATATCATCATTATTCAGACTTCACATTGTGAATCTTTTAAACATCTTGATAATTTGTTATTGAGAGCTATTCAGATCTAAACTGTAATAAAATTCAGTCCATTTCTGATAACTGGTAAAGATCATCAGTGCTGAAAGGTTCCTGACTTTCCTGTCCCCTCTGTCTCCCCCACGCCAACATATGGAGAAGAGTAATGGTCAGACTTAACATTTATTTTCATGGTTATTTAATAAAGCTGCTAGGCAATGGTACAGTATTCCTGCGTGTCAGAAAAACTAAAATACTTAATCAACTTTCTTAAAATGTAGAAATGACTTGACATTTTTAGGAAGAAGTAAGTTGCTTTGCACTGCTTACTTAACTCTTCTCCATATGTTGTGATATAAACTTTTGAATATGGGATCTTACTATTTGCCTAGAAATGTGTATGTATAATATACATACATACATGAGCATATATCTGTGTGTGTGTGTGTGTATATATATATATGCATGCTGTGAAACTTGACTATACAACATAAGTCTTTTTTTTTTTTTTTTTTTTAATTCCAGGAACGGGTAGTCTTTGACACGGTGATTATCCTCTTGAGGCTGAATTCATTATTCACTTGTTATTTAGGTTTTCCTCCCAGTAGTGAGGGCTTTTGAGTCAGTTGCACTTACATGATTATTGTTATTTAAAACTAAAAATAAACAAAGGCTGCATTTTCAAAGATAAAGTTGAGATCCCTGTTGGAGAAATACAGCCCAAATACTGAGTCTGATGTACATACAGGTTTCTGCAGGATGAAATAGAGTACTTTAGAATTTGGGGATTTGATAAGCAGGGCAGCCCAGGAAGAGTGACTTGGGAATGTAATACACCAGTAAGTAAGGGGTGCTCTCGCAGTTTGCTTTTGCCACTTTCAAGATCTTAACTTCTCAGGTTATTAATCAAAATTATTGTATAAGGTAGTCAATAGAATCTAGGTTAAAACAACAGATGGGGGGTTTGTGGAGTGTTTAATTGTCATGGGCATTTTTAGTAGCATAGGCCCTTTGCTCTGCATTTGAATGTTTCATATATTTTTGTTCCACAATTAATCTTCCCTCCCCAGGTTTGTTATTCAACTCTAATGCCTGAATGACATTTTCTAGTAGTTTGACCTATTTTTTGAGGAATAGTTTGTGATTCCAATGCAGGTGTCTTCATTACTGTTACCTCTATATTGGGGGAATAGACAAAAAAAAAAAAAAAAACAACAACAACCCTTTGTTAGAATTACTGCACATGTTTCTGGAGAAAATGTTTTTTGAAGACTAGAATGATACAAGTGAGCAAAAGAAGTTGGTCAGCTTGACTATGGAGTGGTGGCAATAATCTCTAAACATTCCAAAAGACTATGAGCTGGACTTAAGCTCCCTTGGAATCTGAACAGATATAGGAACGTGGAATTGCCATTTGACAACTGTGACCAGGTAGTCTGGACCTTAGAGTCAGATCAGCCAGTGGCCTAAAGCCATTTCAAGTACAGAAGCTGTTTGGGGACTACATTTATATAAATTTGAACATTAAGTATAATTTTTCCTCTTTTTCTTTTTAATATTTGTAAACTCAGAGCTAAAAAGTGATTTTACTTTCTAAAGTTTGATATTAAGTTGACTGTGTTCCTTCCCTTACCGCCTCATTGTTCCCCTTCCCTTTCCTAAAGCAATAGTGCACACCTTAGGTTATTTTTGCTTTAAAAATTTGAACGAAAAACTTCATGCCATGGATTTTTTTCTTTTGCAAGACACCTGTTTATCACTTTGTTCAAATGTAAATGTTCCCCTATGCTTTTGAAATAAATTTCCTTTTGTAATTTTGTTTTGTGTCTTGTGTTATC EMBV3_38193 TTTGCCTGGGCCTTCCTCCTGGTCGCCAGCATTACCAACTTCATCCTCTGCATCATTCTA Gene GeneID:618391|LOC618391:XM_002695216:939_cdna Constitutive 0 NULL GeneID:618391 18 GENE LOC618391 NULL similar to OSJNBa0006B20.10 EMBV3_20793 TATATATTTTGTACCTTGTGGAGAGGATGTGTGTACAGCGGGGGGCCTGGCTGGGGCTTG Gene GeneID:512798|EPHA2:XM_002685747:503_cdna Constitutive 0 NULL GeneID:512798 2 GENE EPHA2 NULL EPH receptor A2 EMBV3_19062 AGCTCCGCCTGCTTTCTTGGGAATCGTTGTTTTTGACAGCCCCGCTTTTTCCGGGATTCT Gene GeneID:513675|DMPK:XM_002695096:545_cdna Constitutive 0 NULL GeneID:513675 18 GENE DMPK NULL dystrophia myotonica-protein kinase EMBV3_10742 TGAGGAACGTTGGACTGACCCTTGGGCCACCTCTATTACTCATTGTACTCTGGAAGCTCT Gene BVV0102_109754 + 0 NULL GK000012.2:23272131-23280344 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034885 TCONS_00034884 TCONS_00034887 TCONS_00034889 TCONS_00034888 1 XLOC_020772 Coding TCONS_00034887 XLOC_020772 Coding Coding PROSER1 12:23241974-23273400 j TSS25667 3065 1 TCONS_00034887_2 361 13 0.902879872712808 0.000974652417346461 0.000280748287968217 0.00107805161434302 0.000528582083554533 0.000400610185053501 0.000105957613672862 0.000192552864381143 0.000444413767154833 0.000639119663850436 2.67305492320559e-08 3.10674094420506e-05 2.2954063333114e-08 0.000182030657686893 0.000197170247551607 6.15913233846153e-05 0.000266707426247278 1.02503297802869e-07 0.00151445403553843 0.000379169101000906 0.00231448640991552 0.000611760495588698 0.000339389649560765 5.62191852892887e-08 0.000491664767625295 0.00251956572231277 0.00202368361900461 0.000113665906606301 5.68815908966548e-16 3.14573611987329e-08 3.80134901320278e-08 XM_604162.4 PROSER1 PREDICTED: Bos taurus proline and serine rich 1 (PROSER1), 0.0 2782 100.00 0.502773246329527 NM_025138.4 PROSER1 Homo sapiens proline and serine rich 1 (PROSER1), mRNA. 0.0 1636 84.25 0.491680261011419 TCONS_00034887_2 sp|Q86XN7|PRSR1_HUMAN PRSR1_HUMAN Proline and serine-rich protein 1; 0.0 589 91.02 0.89196675900277 1 coding CGGCGGTAGCTACGGGGAGTGAGCGAGAGCTGGGCCATGAGGCCAGCTTCGCCGCGGTGAGGGGCAGCCGAGGCGCTGGTGCGGGCCGAGAAGCTGGTGCCTCCCTCCTCGCCGGCCGCAGGATTCGGGGCGCGGGTGCCTCTGCTTCTCGGGCCGCTACCCCCGGGAAGGCTGCTTCCCCGATCTTCTTCCGGCGGCGCCTGGCCTTGCGCTGCGGGGACAGACGCTCTGCCTCGGGCCGCCGAACGCCGGGTTTTCTCTGCGGGACTCAGAGCACCCGGCTCCTCCCCGAGCGGTCCTGAAGCTTTGTGTAAAGAAGCCGGGGAAGCCTGACGGGTTTTGTTTTGTTTTGTTTTTAATAAAAAGTTTTTATAAGTCCCCATTTTTAGAAATTTTTGCAGACTTTGAAGTCCTCTACCTCTTGCGCATCCTTCCTCCTGCTCCTCGAGTCTTTTTCCTTAGCTGGAAACATTTTTTACTCTCGGAGCGGACCGGGGATGATCGTTTTGTAATTGAAACTGTAACTGTTAAAACCTCGTCGAGATAGTAGTCAAGATGGACAAAAAGTCCTTTGAAATGGTGCTGGATGAAATTAGAAAGGCTGTTTTGACAGAGTACAAATTAAAAGCGATTGAATATGTACACGGATATTTCTCTAGTGAACAGGTGGTTGATTTACTGAGATATTTCTCCTGGGCGGAGCCTCAGTTGAAGGCAATGAAAGCATTACAGCATAAAATGGTGGCTGTTCACCCAGGAGAAGTGGTCAATATACTCAACTGTTTCACCTTCAGTAAAGACAAACTAGTTGCTCTTGAACTGTTAGCTTCAAACATTGTTGATGCACAGAATTCTCGTCCCATTGAAGATTTGTTCAGGATAAATATGTCTGAGAAGAAACGGTGTAAGAGGGTGCTTGAACAGGCTTTCAAAGGGGGCTGCAAAGCTCCTCATGCGATGATATCTTCTTGTGGAACAATCCCAGGAAATCCGTATCCCAAAGGAAAACCTAGTCGCATCAATGGAATTTTCCCAGGAACCCCTTTGAAGAAAGATGGTGAGGACTGTTCCAATGAAGGCAAAGGAATAGCCGCACGGATTCTTGGACCATCCAAACCACCTCCTTCAACATACAATCCACATAAACCTGTCCCTTACCCGATACCTCCATGCCGACCACACGCAACTATTGCACCAAGTGCTTATAACAATGCAGGTCTGGTACCGTTAGCCAACGTCATAGCTCCAGGAGTGCCCCCGCCACCTCCATATACTCCTAATCCAGTAGCAGCAGAGAATGAAGACCTCTCCAGTCAGTCAAAACCTACACAGAATCAAGCATTCTCCACCCCAGCCAGTCAACTCTTTCCCCCGCATGGCTCCAATCCCTCGACACCCGCTGCAACTCCGGTTCCTACGGCTTCCCCCATCAAGGCAGGAACTCATCCATCAGCATCGGCCACCGCCAGCCTCCCAGGGATGAACTTGGCGAATACCGTCCTTCCTGTGTTCCCGGGGCAGCTTATCATCTGGACTTCAAGCTGCAGGCAGTTCAGGTTTTCCAGGCCTCTTGTCCCTCCCAGGCATCCCGGGATTTTCCCAGAACCCCTCACAGTCATCCCTGCAGGAATTGCAGCATAATGCAGCTGCACAGTCAGCATTGTTACAGCAGGTCCACTCAGCGTCAGCTCTGGAAAGCTACCCAGCTCAGCCAGATGGGTTTCCTAGTTACCCTTCAGCACCAGGAACACCATTTTCTCTGCAGCCAGGCCTGTCCCAGAGTGGGTGGCAGTGAATACATTTTAACGCATATCCTCCTGCAGAGCAACGTGAGAATTGCCCGAGGACCGCAGTGAACCGTCTGACAAATGTGAAGTTGGCCAGAAGTCAGGAAATGGGGCTAAGGATGATCCTGGGGAAACTGTGATAAGAGTTAAAAAAAAAAAAACACAGTTGCATTCTTTAAAAATGTTTTTAAGTGTGAACACTCCCCTATGTAAATATACTGATGACAAATTGTACAGAGAATAGTATTTTAAAAAGTGTTTGGGGACTTTTCACCTGCACCCTATGACATTTCGAACGGTGTACGTGAGCGGTGTAGGGGACTACTAGAGAGGATGTTGAACTCTTTCTAGCCGAATACAGCCTTAACTCTGCCTGTGCAGCATCCACTGACAGACGTAATGGTCGTGCCTCAGACTTACAGGTTGCATGTGGCCCTGGGGGAGTTACCACCCTTGATACGCTTAAGTGGTTCCTATTAGCATCGCTGGAACTCAGTATCCATATTCCAGATATATCCACAAAAGGGAACTTGAGACCCACCATTATTTTTAACCCCTGACATTAACAAACATACATGTACTGCTGAATTTAACCCAGTGTATTTCAGGTAAGTGAAAATGGTGCTTCATATAGTCCTTAGAATGACTTTCAGGTGTTTTCAACTAAAAACATAAATATATATATCCAGAACTACTTTCTTACAGAAATACAAGTAAGGCCTGTGATAATTTGCCTTCAAAACATATTTCTTAATCTCAGCAGTATCCAAATGTGAGTGAGGAACATTGGACTGACCCTTGGGCCACCTCTATTACTCATTGTACTCTGGAAGCTCTTGGTGAATGTTTACAATCATGGGATGTAGTATTTCTATTTGTACTTAGAATCAAATGCTTATCTAAAATAATGATGTGACAACAGATAGAGAAGACTTGGCTCTGTTAGTAAATATGCAGTGTGTACTCTACTTAAGGACCTGTGGTAGTATAACATGATTGAATGTCATTAATTTAAGTAAAATAACTGCCACATTCAGGGGGATCGGGGGAGTAGCAAGAATGATTTCCAATCCTGTGATTAAAAGTATGAACTATAGAATCTACTGTGGTACATTTCAGCATCTAGAAGTTTTACTTTTATAAAGACGGTGTCTAGAAGATGTTGCTAATGTATTTTCCTTCAACATGGGGAACAAACTTTTTAAGTATATTAATAAATATTCCTGTATGGTCAGTTTTTAACAGTTTTTTAAAATAAACTTTATGGATACAACAGAT EMBV3_16345 AGGGAGGCTGCGGAAGAGATTTTTAACCCAGGTGACAGAAGCCTATGGCCGAGAGCAAAT Gene BVV0102_372731 + 1 EMBV3_06781 GK000015.2:81813277-81817409 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25677 GGTTGACACCTTCTGTATGCATCAGACAACAACTGTGAGTAGCCCATGAATGATAATTCT Gene GeneID:524960|NRIP1:XM_002684642:20_cdna Constitutive 1 NULL GeneID:524960 1 GENE NRIP1 NULL nuclear receptor interacting protein 1 EMBV3_36228 CCCTCATTGGATTGAGATACTCAGCCCCTTATCCTTCTACCTATTAGAGAGGTTGGTTCT Gene BVV0102_292774 + 0 NULL GK000008.2:5586019-5610647 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26825 CCTTCTTGTTCACGCTACACAGAAGCCAAGAGAGGGGGCTCTTTCATCATCACCCTGAGA Gene GeneID:504951|WBSCR17:NM_001083641:96_cdna Constitutive 0 NULL GeneID:504951 17 GENE WBSCR17 MGC151649 Williams-Beuren syndrome chromosome region 17 EMBV3_26620 CCATGGAGGGCTGTGTCTTTGATTCTTTGGAGGCTGGTTTTGGGATCTCATCAGGCAGTT Gene GeneID:510453|ZBTB39:XM_002687412:135_cdna Constitutive 0 NULL GeneID:510453 5 GENE ZBTB39 NULL zinc finger and BTB domain containing 39 EMBV3_01907 TTTGCAATAGAACAGTTGCTGGGGAAGGGAGCCAAGGTTGCTGGGGAAGGTAGAAGGAGA Gene BVV0101_048495 + 1 EMBV3_25314 GK000002.2:43530362-43543015 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105157 TCONS_00105156 TCONS_00105155 TCONS_00105158 1 XLOC_062516 Coding TCONS_00105157 XLOC_062516 Coding Coding ARL6IP6 2:43542627-43584752 j TSS77680 2805 1 TCONS_00105157_3 153 3 0.933482100465293 0.00103251570311706 3.65440789037194e-05 0.000226072816945228 0.000118587373383972 0 4.72517243757397e-05 0.000145717732567428 1.80202336863454e-05 0.000126941943506694 0.000715144278060025 0 5.27743069133482e-115 7.42998437022871e-05 5.17012018940564e-05 7.08279243473387e-05 0.00134100353373085 2.99766931127708e-213 0.000225703738877544 0.000108745377861821 8.92835933876334e-05 8.36418289460326e-05 5.54029607301295e-05 0.000349884268980097 0.000888721374037949 0.00036534800265713 0 0.00016007650226768 0 2.5436792943631e-05 4.20324925752604e-06 NM_001034281.2 ARL6IP6 Bos taurus ADP-ribosylation-like factor 6 interacting protein 6 (ARL6IP6), mRNA. 0.0 2587 99.93 0.511942959001783 NM_152522.5 ARL6IP6 Homo sapiens ADP-ribosylation-like factor 6 interacting protein 6 (ARL6IP6), transcript variant 1, mRNA. 0.0 971 73.85 0.544028520499109 TCONS_00105157_3 sp|Q3MHM8|AR6P6_BOVIN AR6P6_BOVIN ADP-ribosylation factor-like protein 6-interacting protein 6; 8e-107 308 100.00 0.986928104575163 0 noncoding 1 1 1 1 1.52420391286987 0.0183116971133884 0.0662427154454577 0.379046497903668 GGGACGGGAAGAACAATGTGAAAGGGAAGGCGGTATTGGGCCTAAGGGAGATGAAGGCGCCAGGCGCTGAGTTTCCGTTACTGAGGGAAGCCGGGGGAGAGTGCTGGTGTAGAGAAGATAGGAGAAAGCAAACAGGTTCGGGAATGTGTGTTGGCGGGCGCTAGGACCGGGCGTAGAGGAGGTGCGGCTTTGGGACTGCGAAGGCACGCGCTAGTTTAGAGGTGACGTGAAGGTGGCGGAGGTTTTTGGCGGAGAGACTAAACGCTGCACGGGGAGGAAACTCGGCTCCCTTGGGCCTCGGCTCGCCTTCCCTCGTACTGCTTGCGGGTAGTGCTCTGGTCCAGGGGCGCTCAGCCTCTCATCGGCCCCACGGCACTTTTCTTGCTCCAGCACGCACCCTTACGCACCCCTGCGCGCCTGGGCCTAGTGGTGGAGGCCGCAGTGGGCCTGGCTGCTCATTGGCTACTGCGACCGCGGGGCGGGGTAGGTGGGCGACGTTGGACCTCCGAGGGCCTGAGTGTCTTTCCCGCCATGTCGTTTGTGGAGAGCGGGAGACGTTCGGCCCCTCTGCGCCGCCGGCCCGGCACCCCTGTCCCGTTCGCTCGACCTGCGTATTCCGTTTTCAGTCAGGGAGATAGCTGGGGTGAGGGCGAAGTCGAAGAGGAGGAGGGATGCGACCAAGTGGCCCGTGATTTGCGGGCGGAGTTCTCGGCCGGGTCGTCATCGAAACTCAGAAAGGACCCGGTACTCCAGCCAGATGGGGACGGATCTCCGGTTCTGCCCGATAAACGCAATGGCATTTTCTCGGCGGATGCGGGTGGTAAAGCCCTGGCTCGGCGCTGGCCGGTCCAAGTCCTCTCAATTCTCTGTTCTCTGCTGTTCGCCATCCTTCTTGCCTGCCTGCTCGCCATCACCTACCTGATCGTAAAAGAGTTACATGCTGAAAATTTGAAGAATGAAGATGATGTAAACACTGGACTGTTAGGAAAATGACCGGGCATTCCTTCCACATGGGCTACAGTATGGCAATTTTGAATGGCATTGTAGCTGCTCTTACTGTAGCTTGGTGCCTCATGTAAACCTGCACTGAAGCAAAGTACTGGACAAAACTTAGTCATGATTACTTTGTAATAACAGAACATCACTGCCTATTCAGAAGACCAAGAAAGTTGCTGCTCATTATGTGGTTCAGATATAAGTCATATCATCATCATTATGGAGGACTTTTTCTAGAGCCGAGGCATTGGGAATATATAAGTATTCAGTTTCAAGTAGTTCTTAAAAGTATAAGATGTTTACCTCATCTTTTTACTTTTGTGTGTGTTGTCCTTATAAGTTGTAGAAAACATTTTAATGGAAATCAAACTCAGAAACCTAGATGCAGAACATCCTGTATCAAAGCCCGCTTTTCCATGTATATACTACATTTTTGCTAAGAAATACTGATAGTACTTTTGAGATAGAAATATTTCTTATTTATTCATTGTATTAGAAAAGCAAACAATGCCTACTACTTTGACATTTTGTAGAAGCTACTTTTAAATCAGAATATTTAGTTTTCAATATATAATCAATAGAAGGTGCACTTATTTTTTTAACGGGGTATGGTTCTTTGGGTTTTTTTGTTTTTTTGTTTTTTTTTTTACATACTTTCCTACTATATATTGAATTTGTATCTTTTTAAATTGTTGCATCTAGGCAAATGTAAATGTTATTTTTTTATCTGGTGCAAATCTAATACCTTCCATTTGTAATAAGTATTTTGTCTTTTTAAGAAAAGCACATTGGCCTCACATTTAAAAATAAGTAAACTTATTTTTAACAGAAAAGTAACTGAAAAAAGTTTAAGTATTTAAGGAGTGATAATACTGAGGAAATTTAAAGCTGTCCCCTCTTTCCATTTTCACAATGCCAAATGTTTATCTTGGTGCATATGTGGTTACTTCAACAGAACCAATACTATCTTGTTTTTAATAAATATAGACTTGACATTTTTATATTTAGGAATGCTTGAATTAGTTTGTTTTTAGTCTCCAAAATTTGGTTACCAAAATAGAACAAAGTATTTTGATACAATGTGTGTACATGTATAATTTTTTATGTATAGTTTCCTTATTTTCCTATTTAAATGTTCTTTTGTAATTGTGTGTTTTGTTTTTGTTCTCATTCTAATTAAGCCTTAATTGTTCCAATTCCTTTCTAAATACCTGCTTAGGAATAGTCACTTGAATTTTAGAAAGATGGACTATTTAAAATACTGTTTTCCCTGGCCATAGGAAAACCTGCCTTAGGATAGCACTGTGTAGCAAATTTAGTAATAAGCACTGCTTATTCAGGCCAAATGGGAAATGAATATATACATTTGTTCATGTTACCTGCTAATTGTTGTTACTGAGTAAATGATTTAATAATGTTTCTAAAAGTCTTAACCTTTTTTTTCTTTTTACCATTCAAAAACCTTTCATTGGAAATGCCAAATGCTGCTCTCTCTAATTTAAATTATCTAAAGTGTTTAGATTAATAGGGGAAGGGGGTGTTCTTGTAAGGCACACATGTTACACACACATACACACATCCCATGGCTTAATTATTCCACACACACACTCACATACACACATATCCCATGGCTTAATTATTCCTTGCAGAGTAGTGCTTCCTGTCTTCTTCCCCACCCCACGAACCCTTCTCCTTCTACCTTCCCCAGCAACCTTGGCTCCCTTCCCCAGCAACTGTTCTATTGCAAAGGAATGTACAACTAACAGAGTCAGTTTTTCTTCTCTCTGCCCCCAAAAACTCCCCAACACC EMBV3_14072 ACACTGTAGCAATTTCAGGCGTTTTGTGAGGTGCGGGAAGCTGGCTGTTAAGCATACAGG Gene GeneID:512730|DFFB:NM_001035109:100_cdna Constitutive 0 NULL GeneID:512730 16 GENE DFFB NULL DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) EMBV3_27825 ACCAGCAGGTCAAGTTCATCAAGGAGTTGGGGTATGTCAGCAACCTGAGCAACGTGGAGT Gene GeneID:100300003|LOC100300003:XM_002700231:212_cdna Constitutive 0 NULL GeneID:100300003 X GENE LOC100300003 NULL similar to ferritin, heavy polypeptide-like 17 EMBV3_16364 GTCTCCTCCTGCCACCATCCTTGTCCGCCCTTCTCGGGTTGTCCTCTCACCTCCATTTCT Gene BVT0102_084550 + 0 NULL GK000023.2:17771516-17802322 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18542 CTAAGGATCACAAAAATTTGCCTGCAAACTAAACTGCCTATATACAAATTATCTGAAAAG Gene BVT0102_155459 - 1 EMBV3_01477 GK000003.2:52696493-53384336 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29896 CTCCATCCTCCGCAGGCATCTCTTGGTCTGGAAGGTGTTTGCCCCCAAGTTCATTTTTGA Gene GeneID:783989|PIGO:XM_002689674:82_cdna Constitutive 0 NULL GeneID:783989 8 GENE PIGO NULL phosphatidylinositol glycan anchor biosynthesis, class O EMBV3_19484 GCAAGCCTCTGCTGATGGAAGCCCTGGGATGAATCTAGGCTTTTAAATGGATGTCTCGAT Gene GeneID:534287|FBXO3:NM_001099062:51_cdna Constitutive 0 NULL GeneID:534287 15 GENE FBXO3 MGC139517 F-box protein 3 EMBV3_05383 AGCCAGTTACTGAAGAGGCACCTGAAACAGGTTTTGATGATGATGGTTCAGAATTTCATG Variant GeneID:534185|MRPS31:NM_001076015:154_cdna 830^973 1 EMBV3_35458 GeneID:534185 12 GENE MRPS31 MGC140733 mitochondrial ribosomal protein S31 EMBV3_03108 GGGGAAGAAACTGTAACTTTGAAATTGTAACCTGATGGACTGCAAATGTGAAATCCTGCA Gene BVT0102_259221 + 0 NULL GK000010.2:15629077-15638527 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019456 1 XLOC_010136 NonCoding TCONS_00019456 XLOC_010136 NonCoding NonCoding - 10:15629766-15632572 - TSS13346 2806 1 TCONS_00019456_1 83 1 0 0 0 3.29793922360629e-06 0 0 0 0 1.05394057441155e-05 1.40594048257114e-05 1.75958096707652e-05 0 5.09720864919273e-06 2.04510393431257e-06 0 1.74847030126382e-05 0.000188250594321309 0.000295835338207277 0.000491801951228656 0 0 0 0.000105782978447838 0.000186358132175656 0.000125465786385913 0 0 7.09946902092954e-05 1.71153769249377e-05 3.46015916368716e-06 4.92806838666365e-05 0 noncoding CTCCTCGTCGTAGTCCAGCCGTGACCATCGCAGCCCCTTGAATACATAAGTAAATAAGATGCGTCCACCTTTGGGTGACTTAACTCGCGGTCTAGATCCTCTACTTAAAGGGGCATTTCAGTTTGTTGTCATATAAGGTCAGTTTGGAAGGAGTGATCTAGAGGCACCGGCAGTCTTGTTTAGTCAATAAATGAGTAAAGACCATGGACCAAGAATTGATGCTGAATATTTTGAATATTTTAAAAATGGAAAAGGAAGGTGCTAGTAAGTCTGGTTTTCTGGACCAAACATTATTTATGGGCTTTATTGACCTAGTGAAAGAAAACGGCGCACAGTTTTTAATTGTCCACCTGAGTCATTTGGTTCAATTTGGACTGCCAAAGAGGCTCTATTTGGAGCACTTTCTCCAGGTTTTACGGTTTGCTTGCTTTGGGGTTTCTGAATCACAGTTGTAAGAGATCTTAAAGCCTTAATTCCCACCTGGTTACCAACTTATTGTGGCCAGTTCTAGAACATTTATTGTGTACTAAGTTGGCTGCCTATGTCTGTTAATAGGTAATAGGGACTGCTGTCAACAGGACAAATACATCCCCACACAAGTATTTTTCGATTCTTTTATTTCTACACGTCTACACTCTTCCTCATGTGCTCGAAGGTAGTTCTTTTGGATACATTGTATTTATTTTTCAGAGACATGGGTTCAAGGGATAGATAAACCAATATGTATGTATGTTGCAAGTCTGAAATATTTTTACATAACTCTTATACAGTTATATTCTTGAATATATAAAATTTAGGAGGAAATAAAAAGTGACAATGTAAAAGGCACATAGTGAATGCCTACACTGGGGAAGAAACTGTAACTTTGAAATTGTAACCTGATGGATTGCAAATGTGAAATCCTGCAACTAAGCATTTTACTCAGTAAGTTCTTTCAGGTAAAATATTAAGTGAAATTTGAAAAGGGGTCATATTTACTTTTTGAGTAACTGGGAGATGCAAAATAAAACTGGGAAGCCATTGTTTTATTTCATCTGGGTATAAGTATTATGGGGTGTTTTACTTGTGTTAGCAGATGTCAGTCATCAGTTTTGTTAATCTTATTGACATCAATTTGTGTAGTTGGAATTTATCGTTTTAAAATATATTGGTTTCATTATAAAACATAGAGGGACCCCAAATTACTTCTCTTTGCCAGAGTCAGTTGTTATTTCTGGATATGGTATTTAAGGTTGCTTGAAAACAGAGCTCTTCATCACAAACACAGTATGCTGACATGATACATAGAATCTGTGTAACACAAGAGTCCTGAAGTTTGTTCTCTCTGGTGGTAAATGCTCATCTTCAATTTAAAATTTTAACTGCAGCTAAGTCCACACCACTAGCAATGTGATATGAGACAGTATCTTTCCAGAGAAGTAATCCTTTAAAAGTCAACCAATCAAATGCAGAGCTACCCACCATCCAGCTCTGCTGAACTGAAACAAATAGCTCAATTTAACATAGGAAGACTGGAGAGGATGACTTGGGAGCCCAAACCTCTGTTAAAAAGAATGTACAGGACCAAATCAGAATTGAAAAAGTCGTGACTTGATTACTACTCAAAATATTAAACTTATAACAGCTTTTGTACTGGTTTTAGAAAATTGAAGGCTTTACTGGATGTCAGTCATTACAGAAGTTAAAATATCCAAGAAGTGTATTTAGCCAATTGAATACTTCCAACATACTTTGAAAGAAGAGATTTTTCTCTCACTCACAAATAGATTTGTTTGTAGTTTATTTCTCAGAAAATTTTAGTGATTTTTATTTTTGTTGCCAAAAAGAAATAATATAGCTCAGCCAAAGCTGAGCCATTTGCCCCAGGCTACTTAACCAAACATCAAAACAAAACACCACCACCACTGCCCTTATAGTCCCTGTTTTACAGAGTTTCTTAAATTGGACTTCATTGCATATTACAGGAAATAAATGTTCCCTTAATGGCTCTGAATATCAGGCATAGTGAGAAGAGAAGCCCCATATCAAGGAATGTGGCTGAATTTTGGAGAAGATGAGTTCCTAACTCTTGAATGATTCTACAATGGGAGTTAGGTTATGAAAGATACAGAGTTTGTAACTTGTAGAACTGGATTTGATTCACATTGAGAAGAATAAATGAGATACAATTCAAAAGTTTGAGCCCCTAGGGAGAAAGATGGCCTTCAAGTAAGGAAAGATACCTTCCTGCCTTCCAGAACAGGAAGAATATTTTCCTTCAAGAACCATTCCCAACAAATGAGCAATCTTATTCTCTAAGAGGTATGAGCAATGGGTGTCCTTAGTCTCTCAATACATTTTGAAAAGTACTGTTTTATAAGTAACCCACGTTGATGCTGCTGCCATTTTAACTCATTTACACTTGCCTGGCCTCTAAAAATGGAGACCCTCTGGTTAGCATCCTTTTAGGAGTCAAGTTAAGGTATTCACAGTTGAGCTTCTTGCTCTTCAGCCTGCATCACATACACTGGAACCTGGCCATAGTACTTTTTCACCTACATCATGGTTTCGCTGCCTGGACCCCAAAAGACAATGATATGGAAAGGCTCCAGCTTAGTTATGTTCTCTTTTGTCTTTCTATATAAATAGCTTTTACAAATGCAGATTATTTTTTTCCTTTTTTTTTAGAAATGTAAATTATTCTTTTGAAATTCATGGTAACAAATGTGAAGGCTACTGCATTTTGATTTGAATAGCAAAGGCATGTTGAGGTTCAGGATCTAAAAAGTTAAAACATTCTTAATTTGCTTAATAAAGCATTGGATGA TCONS_00016126 . 5' 660 TCONS_00016126 . 5' 660 EMBV3_18779 AGCTTTGTTGTGATTGTGACCAATATTGAGGCCACGTGAGCACTATCTTACCACATTGCC Gene GeneID:616331|AP1S2:NM_001040591:35_cdna UTR3_Alt 2 NULL GeneID:616331 X GENE AP1S2 AP1S1 MGC128457 adaptor-related protein complex 1, sigma 2 subunit EMBV3_39334 CTGAGCCAAGAGGGAACCGACTTGAAGACAGAGTTTGGGGTAAATGCATAGTACATTAGC Gene BVT0102_158618 + 0 NULL GK000013.2:44214254-44229669 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15712 CTTCTATCACTGTCCCTTCTACAAGCAATACGCCTTCCTGTGGCCTGGAAAGAAGATCCC Gene GeneID:536784|PLCXD2:XM_002684767:270_cdna Constitutive 0 NULL GeneID:536784 1 GENE PLCXD2 NULL phosphatidylinositol-specific phospholipase C, X domain containing 2 EMBV3_37202 GAGAGCCGCACCAACGCCGACATCATCGAGTCAGCTGTCCCGGCCCCCAACTTTGCCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14221 ATCACCAGCTCCAACCGTATAGTTGCCTAGCCATGGAAAACCTCATTGGAACCTTACTAG Gene BVV0102_174839 + 0 NULL GK000006.2:115610207-115687861 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03234 TCCTTACTTCCTGCTTTAGGGAGGAGGGGTGGGGGGAGCAGGAAAGGAGGGGGCATCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12555 CAGTCACAGTAAGAACAGAGTGTCTGTACTTCCAGGAAAATAAGAAAATTTCTGTGAGAG Gene GeneID:786490|LOC786490:XM_002687764:89_cdna Constitutive 2 NULL GeneID:786490 5 GENE LOC786490 NULL similar to epithelial membrane protein 1 EMBV3_10150 CCTGGTACAGCCCAGCCAGGCAGATGCCCGGCCCTGAGGACTGTCCTGCACAGCCTGGAT Variant GeneID:539613|TRMT1:XM_002688756:120_cdna 690^918 1 EMBV3_27496 GeneID:539613 7 GENE TRMT1 NULL TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae) EMBV3_32567 GGAAGAAGTTCGTGTCCTGAAGCAGCAATTTTCCAAGGAGCTGGAGGATGTATCTGAGGG Gene GeneID:100295717|LOC100295717:XM_002685466:37_cdna Constitutive 0 NULL GeneID:100295717 2 GENE LOC100295717 NULL hypothetical protein LOC100295717 EMBV3_38983 GAGCAGTGGAGGCAAGGAGAGCTGATGAGGCCCCACACCCCCGGGGCTGCAGGGAAGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01500 AGAGAAAGAATGGCTGGAGGAATACTGAGGAAGAAAGAGAGAAAGGTGAGCCCTCGTGGC Gene BVT0102_048072 + 0 NULL GK000020.2:69477633-70181779 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118314 1 XLOC_072480 NonCoding TCONS_00118314 XLOC_072480 NonCoding NonCoding - 20:69713470-69714209 - TSS88782 739 2 TCONS_00118314_2 43 1 0 0 0 0 0 0 0 0.000134153390601525 0 0 0 3.09767906137582e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.37854857035497e-05 0 6.5691436971341e-06 0 0 noncoding 0 0 0 0 0.0544937705365725 0.680377720347498 0.0432930596942071 0.546215011952839 GGCATTTTCAAATCTGAGCTGTATTCGCTGCGCCCGTATTTGCCTTATTTTGAAAGCAACATTGTTTGACCGTGAACGCTGCATACATATGTAAAATATTCTCTTTTTTTTTCTTTTTGACTTCAGGACAGTTGTCTTATTGAAAATAATTGTGTCAAGAGTAAAATACCACTGCTGCTTGTTTGTTTTAATGAAAGATGCACACTTTTATCTCTCACTCAGTTTTATGGCTGTTGAATTGTTTTGTGAATAAGTGACCATCATGTGCTGGCAAGAATATCATCTGGGGTGAGACCGCTAATTGTGAGGTTAAGTTTCTTCTTTCCAAAATACATAGCATCTCTGGTCTGGCTTTCAGAAAATGCTTTTGACAAAAAGGGTTTGAACCGGTTAATGGAAAAAGGAAATGAAAAGATAATGAGAAGTCAACGTTTCCAAGCCTCGTGGAGGAGGAGGCTAAAAGCCAAGCTCACCAACATACGTTGAGAAAAATGTTTTAATTAAGAAAATGCATATGAATATTTTATTTAAATGTTCTAATTGCGACAAAACATTGGAAACAGCATCCATGTGAATCATTGGTTAAGGATGGTGGCCTCCGTGTAATGTATGAAGTGGTTAAGTGTAGCTTTTTCAATCCAGAAAAGAGAAAGAATGGCTGGAGGAATACTGAGGAAGAAAGAGAGAAAGGTGAGCCCTCGTGGCCCGGGTGGTGAGCTGGCCGCCGGAGGCCTGGCGG TCONS_00115293 . 3' 97480 TCONS_00115293 . 3' 98218 EMBV3_01404 TCCAGCTGCCCTTCACTCCCACCTGCTGCCAAAGTCCCTGTGCTAATGGGATTACAAATA Gene GeneID:534006|FAM53C:NM_001046366:19_cdna Constitutive 1 NULL GeneID:534006 7 GENE FAM53C MGC137468 family with sequence similarity 53, member C EMBV3_41722 GGGACACATACAGACTGAAAGTGAAAGGCTGGAAAAAGATTTTCCATGCAAATAGGGACC Gene BVV0102_352006 - 1 EMBV3_02506 GK000015.2:993000-1046941 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00010367 TCONS_00208613 TCONS_00088086 TCONS_00148278 TCONS_00252006 TCONS_00238893 TCONS_00239411 TCONS_00244651 TCONS_00162783 TCONS_00214738 TCONS_00038382 TCONS_00179124 TCONS_00040697 TCONS_00129427 TCONS_00166330 TCONS_00161836 TCONS_00219681 TCONS_00238308 TCONS_00220662 TCONS_00251853 TCONS_00187806 TCONS_00152890 TCONS_00135528 TCONS_00207978 TCONS_00070841 TCONS_00197486 TCONS_00091329 TCONS_00253888 TCONS_00189889 TCONS_00177994 TCONS_00210178 TCONS_00017462 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00244653 TCONS_00200531 TCONS_00251623 TCONS_00244654 TCONS_00056147 TCONS_00187583 TCONS_00021194 TCONS_00206764 TCONS_00116799 TCONS_00089425 TCONS_00019991 TCONS_00040834 TCONS_00206862 TCONS_00189806 TCONS_00198434 TCONS_00152647 TCONS_00019197 TCONS_00148253 TCONS_00072406 TCONS_00125002 TCONS_00019962 TCONS_00040896 TCONS_00089139 TCONS_00250939 TCONS_00239410 TCONS_00175881 61 XLOC_131641 XLOC_142855 XLOC_005918 XLOC_127126 XLOC_052873 XLOC_090160 XLOC_154947 XLOC_145559 XLOC_146077 XLOC_150512 XLOC_099664 XLOC_130757 XLOC_022207 XLOC_108897 XLOC_024513 XLOC_078140 XLOC_101168 XLOC_098721 XLOC_133000 XLOC_144975 XLOC_133979 XLOC_154794 XLOC_113849 XLOC_092655 XLOC_081751 XLOC_126492 XLOC_042618 XLOC_119147 XLOC_056104 XLOC_156826 XLOC_115926 XLOC_107767 XLOC_128688 XLOC_009039 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_154564 XLOC_033950 XLOC_113628 XLOC_011867 XLOC_125285 XLOC_070965 XLOC_054210 XLOC_010669 XLOC_024648 XLOC_125382 XLOC_115843 XLOC_120088 XLOC_092412 XLOC_009877 XLOC_090135 XLOC_044175 XLOC_076545 XLOC_010640 XLOC_024710 XLOC_053925 XLOC_153882 XLOC_146076 XLOC_105660 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_33247 ATAGAGAGACCCTCCAGAGGTGACATAGCCATGGAGTGGGGAAGTGGTACCGAATATGCA Gene BVV0101_036362 + 0 NULL GK000019.2:41106066-41109869 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20883 TACCTGAGAGACTTGTGTGACCAAATGAGAAGACTTGAATAGTTGCCTCTTGTGGGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19053 GAAATCCTTGGTAACCATCTGAAAACTTTATCCAGGGACAACACAGGAAACAGAACTAAC Gene BVV0102_323393 + 0 NULL GK000027.2:16740361-16848689 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155112 1 XLOC_094645 NonCoding TCONS_00155112 XLOC_094645 NonCoding NonCoding - 27:16744954-16788236 - TSS116130 841 1 TCONS_00155112_1 57 0.218787158145065 3 0.980638155310644 0.000161779847169373 0.000669099605901402 7.00398410374293e-05 0.000404838986760551 2.34824212975229e-05 4.25333848938178e-06 4.16055750559747e-05 0 0 0 0 0 0 7.83066661794708e-05 0 0 0 0 0.000156648309121977 0.000222327245598322 7.21932801451022e-06 0 0 0 7.41454040707673e-05 6.70198500338557e-05 0 0 0 0 XM_598478.7 SLC38A6 PREDICTED: Bos taurus solute carrier family 38, member 6 (SLC38A6), 5e-16 89.7 81.91 0.110582639714625 NM_001243739.1 Jagn1 Mus musculus jagunal homolog 1 (Drosophila) (Jagn1), transcript 4e-11 73.4 80.46 0.0998810939357907 0 noncoding 0 0 0 0 GGGTGTCCCGGCGGCGCGTGGGCGCCAGGGGCCGGGGGCGCTTACTACACGGGAACCGCGGCTGCGACTCCCGCAGGCCCGTGAGCTGCCTCCCCGACGGCACGACTTCCATCGCCCGGAGCGCGTCGCCAGGCACCATCGGATGAGGGGATCTTCCTGACCCAGGGATTGGGCCTGCTGTCCCTTGTATCTACTGCGTTGGCCTGCGGGATCTTTACAACTAGCGCCACCTGGGAACCCTGGATGAGGTCCTGCTAATTTGACTGGAGTTCCGCAGAGAAACATAGAAACAAAAATGAAGCAACAGTGCTTCGGGAGGAGGACTCTTTGCCCAGCTCTCTGCTCCACATCCGGTTTGCCCTGTGGACTGTTGTTGGGAGTGAAGCCAGGATTGCCCTGCGGAGTCTGGCCCAGCCTGGAAGAGACCTCTTGGAGTTGTGTGAATGAATTAGGTCCTCAAAGTGCTTAGAACAGTGGCTGGCACAAAGTCTGCATGTAATAAATGGAAGCTATTACCTTCTCTATATAGGTTAGTTCTGTTTCCTGTGTTGTCCCTGGATAAAGTTTTCAGATGGTTACCAAGGATTTCTTATTAGAAATGGTGGCGATGAAATAAAAAGTATGCCCAATTGAAGTGTGTGTTTAATGCCTGCAGTATTTTTTAAAATTGGTTTCTATGAGTGCTTTTGAAACTTCTTGATTTTTTTTCTTAAACCAATACTTTTCATCTATAGTTGTACTGTAATCAAGAATTAGAATTCTATTAAAATGGAAGGCAGTCAACGTTTTAATTTTAGATTCTGTACAATGTTCAGCGTATATTAGGTGCTTAATAAGCAAC TCONS_00155111 s 3' 3427 TCONS_00155111 s 3' 3427 EMBV3_33618 TGGTTTCCAAAAGGGAAGTGGTTTGGGTAAGTGAGGAGTTTGGGATGAGCAAATGCAAAC Gene BVV0101_012054 + 0 NULL GK000019.2:5977691-6236877 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05514 TCTGTTCACAGGATATGTCCCTTCCACAAGTGCCCTGAGAATTTGTCCTGCTCAGTGGAG Gene BVV0102_093140 - 1 EMBV3_38529 GK000028.2:26735794-26764742 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14822 ATGATGGGTCTCTAAGCCCGGGGCCCCTGAATCTCCAACATACTTTCTCCACTTTAGGAA Gene BVT0101_060129 + 1 EMBV3_43715 GK000030.2:19026102-19057640 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246499 1 XLOC_151005 NonCoding TCONS_00246499 XLOC_151005 NonCoding NonCoding - X:19018420-19044350 - TSS184792 971 1 TCONS_00246499_4 119 2 0.962628716880713 4.67066885206896e-06 1.14158261421121e-05 0 1.08327397773746e-05 1.90674307660992e-06 0 1.16363925290926e-05 5.53759997702385e-07 9.28660472684876e-06 1.06273905705962e-06 3.12493341832645e-05 3.37784191035163e-05 0 1.45334824738745e-06 0 0.00140749216165835 0.00272525779158544 2.58402595717489e-05 1.28679714346785e-06 8.82039874091244e-05 5.3007623619632e-06 0.0026531794665389 0.000143295419550164 0.000800929570729934 4.67942535258272e-05 8.35381209364564e-07 1.29729213279431e-05 6.59470233055613e-06 1.66653063823659e-06 0 XM_005199981.1 LOC618452 PREDICTED: Bos taurus uncharacterized LOC618452 (LOC618452), 0.0 1146 91.43 0.809474768280124 NR_024359.1 LINC00086 Homo sapiens long intergenic non-protein coding RNA 86 (LINC00086), 6e-23 113 84.31 0.104016477857878 0 noncoding 0 0 0 0 0.0137574919770164 0.895468757176939 0.0365225341738063 0.444199800634808 ACCAGGGGCCTCCTTGGGGCTGATGCGTAAATGTGCCCTTTTCAAGTTCGGGTCTCACGCTCTGGGTGACTGGATCCCCAGCCGCAGCCTCTTCCTGGGCCAGCCTGAGAGGACCTGGGGAGGGCACTAGGGAGGGTCTTTACTTAATATGTGCGTGCCTGTGTGTGAGTGCGCATGTTGAGTGCATGTGAGTGTGGGGATGTGTGTGTGAATTTGCATGTTCATGCATGAGGGCTTGAGTGTGAGCATGGGGATGTGTGGGTGTATAAGTGTGGATGAGTGTATGGGTATGAGTGCACAGATGTGGGTGTGTGAAGGTACTGGTGTGAGAGTGTGTGTGTGGGTGTGAATATACATGTCAGTGTGCATGTGTGAATGCGTGTGTGTGAGTGTTTATGCACACATGAGTGGCTGTGCGATGCAGACGGTGCTGAGCTGTTTAGTGGGTGTGCTCTGGGGGACGGGCATCCTGTCCTCCCCAGGCTCCCAGCTCTGTTGGAGCTGCCTGGGCCCTGGGAGGCCGCTTCCTAAAGTGGAGAAAGTATGTTGGAGATTCAGGGGCCCCGGGCTTAGAGACCCATCATCACCTGCAGAGAATCCCCCCTCCCCATGGGGCTCTGGCTGGGGCTGTCCGCCCCCAAAGGTATTGGCTGTGGGAAGGGCGGGGACACGTCCTCAGCACGTGCTCCTGCCACTATTTTTCTTACCATTTTGATCTTGAGTAGTTTGCTGCTGCTGCTGCTCTCCCACCTCTTCCTCATCTCCTCACTAGGCCTCTGCTGCTCTCCTCTCTGTGTACTTTATTTGCAATCTCTTTTTCAGGCAGTGGAGGTTCTACACCATCACCGACTTGAATAAGACAGCTTTCCCTTTTCTGTGTGTGATGAACTCTCCACCAGTCAGCGCAGTCTGGTCAGAGAAATGTTCTTGTTTTCAGTGTTGTCAAATCTTGTGTCTGTCTAAGTTAATAA TCONS_00243895 r 3' 25528 TCONS_00243895 r 3' 25552 EMBV3_33412 TCACTCCTCGGGAGGAGCAGACCAAAGAGGACTTAGGGCTCGATTGGAGGCAGAGTGCTG Variant GeneID:514587|USP19:XM_002697079:604_cdna 164^208 1 EMBV3_11668 GeneID:514587 22 GENE USP19 NULL ubiquitin specific peptidase 19 EMBV3_34146 TTCTGAACCAGAAACCACCCGGGACCACATAAAAGGAGAAACCCACAGTCACTGCAGAGC Gene BVV0102_273117 + 0 NULL GK000004.2:62241285-62259289 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184213 TCONS_00184214 1 XLOC_111297 NonCoding TCONS_00184213 XLOC_111297 NonCoding NonCoding - 4:62258024-62259060 - TSS137228 931 1 TCONS_00184213_1 74 2 0.102415458937198 0.0017980206208845 1.63361733917682e-08 0.000904525225161549 3.45575408575686e-05 0.000596096776436957 3.44180080287173e-10 9.29974518431857e-09 0.000299351561436608 0.000560588630046336 0.000331455489961476 3.37892951998644e-09 0 6.62655464386498e-12 0.000381472405473333 1.46704145894648e-11 0 0 0 0.000192249614478865 0.00106204951825346 0.000127166927011505 0 0 0 0.0016818837296607 0.000223177087650295 0.000797390212834809 0 8.42982093180068e-09 0 NR_036501.1 LINC00997 Homo sapiens long intergenic non-protein coding RNA 997 (LINC00997), non-coding RNA. 7e-15 86.0 81.32 0.0934479054779807 0 noncoding CCCACGTGTCCATTCTGTAGTGAGCTGACTGCTCGGCGCTCCAAGCACGTCTCCACGCGCGTTTCCCAGCGCATATTCTCACCTGCGCGGCTCAGCTGTCATACCTTGCTAGCGAACAAGACTGAAGAACTTTCTTCGTTTTAATTCCTTTCTTCGGGTTTAGCCTTAGCTTTGTTTTTGCCAAAAGGTTGTCTGTTTCAAGGTTATTAACAAAAAAGGAGACCTCAATTTTAAAAAGTAACAGTAGGGGGGAAAAAAAGCGAGGAAAGGAAGCGAGAGCCTGTGACGCGCCTGGCACTTATTAGGAGCGTCTCTCCTCGCCCCTTTGGAACACTTGGCTGGTATGGGACACCTAGAGTTCATCTCCTACACCGAGGCAGTGGCCCGACGCTGCAGGCAGCAGGTGGCAGAGCTGGCATGAACCCGGTTGCTCAGAATTCCTCGGCAGTTGAGCGCGGAGCAGTGCTCAGCACTTTCCCCTTTCTGAACCAGAAACCACCGGGGACCACATAAAAGGAGAAACCCACAGTCACTGCAGAGCCATACGCGATGCCACAGCGACTGGCAAAGATGCACAGGGACCGTGGCGCTTGTCATGTCCTCTGCTCCCGGCCCTGCGGCCAGAGCCCACACCGCCTCACGTCCCATCTGTTTCCCGACGGATCCAACTCCCTAAAACCCCTTTCCCCCATCTGGTCTAGACGCCCTGCGGCTAGGTTAATTTCCCAGATGCCACACCGCTCAGAAATGCTTAGGACTCCCATTAGCCCATAAATAAAAGTTAAACTCCTTGGCTTGTTTATTGATACCTTTAGTAGCCTGCCCCATCTACCTATTCAACTTCAATTTCCCACGTCCCCGGACATAGATCTTCCTCTCCAGTCATTCCAAGTGAGGTCTTCAATGTGACTCTGTTAGTTAACTATCCCTT TCONS_00181741 TCONS_00181742 r 5' 761 TCONS_00181741 TCONS_00181742 r 5' 230 EMBV3_31224 GCCAAAACCCTTTTCGGGGGGAATAGTCAGTTGAGATCATTAATTTTTTTACCCCCACTA Gene GeneID:539640|RCAN1:NM_001034679:49_cdna Constitutive 2 NULL GeneID:539640 1 GENE RCAN1 DSCR1 MGC128596 regulator of calcineurin 1 EMBV3_03209 CGCCTAACTCTGGTGTTTTAGCAGCAGGAGGAAAACAGGTCATTACTAAATCCAGTGGCC Gene BVT0102_185779 + 0 NULL GK000004.2:120207829-120229926 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185549 TCONS_00185555 TCONS_00185560 TCONS_00185552 TCONS_00185553 TCONS_00185558 TCONS_00185554 TCONS_00185550 TCONS_00185556 TCONS_00185559 TCONS_00185551 TCONS_00185561 TCONS_00185557 1 XLOC_111617 Coding TCONS_00185552 XLOC_111617 Coding Coding ESYT2 4:120228281-120246925 j TSS137924 4292 1 TCONS_00185552_3 381 0.0232991612301957 10 0.77031593627635 0.000307368344358099 0.000861483898339894 2.06450391507763e-08 2.0226034841406e-42 0.000714849514291053 6.16439162242225e-05 8.02698784577492e-05 1.26654983013832e-18 1.59740810854686e-16 1.25462535285862e-05 2.79978206905907e-22 1.94426968313743e-05 8.72468371596027e-05 1.44697110772729e-82 0.000197142082370028 0.00130234137224276 0.00164241077889926 4.88381359122582e-14 0.000838284290554912 0.00160866883452107 9.84972160724816e-14 0.00254950746067839 0.00535981709451855 0.00263731412030755 0.000487202299004448 0.00300525298667277 2.91246819961844e-09 0.000487789277127965 0.000571959380943408 2.65573794626258e-11 XM_003582165.2 ESYT2 PREDICTED: Bos taurus extended synaptotagmin-like protein 2 (ESYT2), mRNA. 0.0 7380 100.00 0.953168685927307 XM_005249551.1 ESYT2 PREDICTED: Homo sapiens extended synaptotagmin-like protein 2 (ESYT2), transcript variant X1, mRNA. 0.0 1200 83.22 0.266309412861137 TCONS_00185552_3 sp|A0FGR8|ESYT2_HUMAN ESYT2_HUMAN Extended synaptotagmin-2; 0.0 668 86.28 0.992125984251969 1 coding 0 0 0 1 -0.0402925961872519 0.731869219896053 -0.0176713776014496 0.779189656776655 AGAGCACTATTTGTGAGTTCTCCGTGTTCCTCCTTCTTGTGTTTGGTGGGGACTGCTAGAATGTGGACTGGAGACTAATGCCGTCTGTCAGTGCCGGAATGACGTGCATGCCTTCGGTTTCGCATGACTTCAGTTCCTTCTGGGAAGAAAATAAACAGCAATCCAAATCCTCTTGTCCAAATGTCAGTTGGTCACAAGGCCCAGGAGAGCAAGATTCGGTACAAAACCAACGAACCTGTGTGGGAGGAAAATTTCACCTTCTTCATTCACAACCCCAAGCGCCAGGAGCTCGAAGTGGAGGTGAGAGATGAGCAGCACCAGTGTTCGCTGGGGAACCTCAGGATCCCTCTCAGCCAGCTGCTCGCCCGCGAGGACATGACCCTGAACCAGCGGTTCCAGCTCAGCAACTCAGGTCCCAACAGCTCTCTGAAGATGAAGCTCGCCCTCAGGGTGCTCCACCTGGAGAAGCAGGAGAGGCCTCCAGACCACCAGCACTCGGCTCAAGTGAAACGGCCTTCTGTGTCCAAGGAAGGCAGGAAAGTCTCTGTCAGGCCTCAGATGTCTGCATCGCCGGGCTCGGGTGACGGTGGCACAGCCCCGTCCACACCAGTCGCCGGGGGCGATGAGAGGCCTGGTGTGGAGGAGCGAGGCTTGCCCGTGGAGGCCGGCCTGCAGGGCCCAAGGGACCTCGGCCGGAGCTCCTCCAGCCTCCAGGCGGGCCCCACCGGCTCCCCCAGCCACGTCTCCGTCAAGGAACCCACCCCAAGCATCGCCTCGGACATCTCGCTGCCCATTGCCACACAGGAGCTGCGGCAGAGGCTGCGGCAGCTTGAGAACGGAACCACCCTGGGACAGTCCCCCTTGGGGCAGATCCAGCTGACCATCCGGCACAGCTCGCAGAGGAACAAGCTGGTGGTGGTTGTGCACTCCTGCAGAAATCTCATCGCCTTCTCTGAGGATGGCTCTGATCCCTACGTCCGCCTGTATTTGTTACCAGACAAGAGGAGGTCGGGAAGGAGGAAAACACACGTGTCGAAGAAGACACTGAACCCCGTGTTTGATCAGAGCTTTGATTTTAGCGTCTCACTGCCAGACGTGCAGAGGAGAACCTTGGATGTGGCCGTGAAGAACAGCGGTGGCTTCCTGTCCAAAGACAAAGGGCTTCTTGGCAAAGTGCTGGTTGGTCTAGCATCTGAAGAGCTCGCCAAAGGCTGGACCCAGTGGTACGACCTCACAGAAGACGGGACGAGGCCCCACGTGGTGACGTAGGCCGCCGCCAAGAAGCCCCCGCTGCACCTGCCCACCCTGCACCAACAACCCTCACACACACCCCCCGCAGACACACCCACGCTGCCCTGCACCGACACACCCTTCTCCCCCGGCCCCCGCAGACACACCCATGCTCTTTTTATAATTTCACGTACTTGGTTACTAGCCCCGTGACGGTTTTATAAAATGTTGATACTTTAGGCGTATTTGGCCAATATTAGCATTAAGTTTTGTATGTTTAAATTTCCTCTAGTATTTCAGCAGTTGTCACGGTGTGCGTAGCATAGCGGCCAGCTGTTGTGTGTGTAAAGCTACATGTCGGCTGTCTCCTAGGAAGCCGATGTATGGACCTGCTTATTATTGCCTTGTTTTGTATATCACTGAGGTGTACTATGCCGTATGAATAGACTATTTTTTATTATCTCTACATGCTGGTTTGAAATTCAGAGAAAATGGATCAAGGAAATATATATATTTTTTTCTTCTGAAACTTATTAAATTCTTATTACAAATAATCATTTTTGTCTTTGCAGGAAAAAGTTCTCAGTGACCTATTTTGTGGTGTTTCTTTTTAAAAAGAAAAGCTGAAAGATTAGTAAATGCTAGTATATTTCTGCTCATTATGAATGGTAAAAGAATGTATGCAAAATATTTACACTTTCATAAATATAAAGATGTATTATAAGGAGTCAGTTGTAGCGCTTATAAGGAAAAATGTATAGCTGAGCAATATAAAATATCACAAGAATTGTCACGGTTCACAGCGCACTAATCTGAAATTTCTCACATAAAATAGAACGTCTTAAGTTTATTTTTAGTTGCTTGTTATAACTTATTCATGAAACAGTACAGATACATAATCCTTTCCCTGAAATACAATACTTCAGTGTTAGCGGTTAGTCTGTTGTGGAATTTTCGGTGTTTTCTCAGCTGTAAAAGAAAGACTAACTCAGGTTGTCTCTGCAGAGGCTGTGAGACAGGTCGGGGTGAGCAGATAGGACATGATGTGGGAAGCCGCCACTGGCGCACGCGTGTTGGTGTGGTGTGCACGGGGCGGGGCTGGCTCACGCGTGTCGGTGTGACATGCATGGGGAGGAGCTGGCACACGTGTGTTGGTGTGACACGCACGGGGCAGAGCTGGTGCATGTGTGCCGGTGTGACGCGCACGGGGCGGAGCCGGCACCTCCACCGTGGGGACCCAGGGGTCTTGGCACGGCAGCCGCAGGCTGTCAGTAACTACTGGGTTTCCTCACCTCATGCCGTGACTGACCTCAGTGTTGGGATGTTGTTATACAACTTTTATTTCGGAGTATTTTTTCTTCTTAGATTAGGAAAAGCACGTTTTATATCCAAGTATATAAAGGTCCCAAGCCTCTTGGGAGGTGAGATTCCGTAGCCTGTGGCAGCTGTGCGTGCCCTAAACACGGTGCACGTGTGCAGAAAGCTTTAACTATTCTAAGCTGCGGGATGCAGATGACCCTGAGCCATGAGGACATCCTCCAGCCCTGTGTAAATACCGGGGGAAATGCGGCTCTGAGCTTAGCGACCTCACCGTTCATCCCGCGTGACTCCTGGACGCTCGCGGGGCCTGACTGCCCAAGTGCCTGTGGACGCTGCCTCTGCACTGCCTCTCCTGCCCTTGGGGCTCAGCTCTGGCCCTTCACACTCTGACCCCAGGGGGTGGTGGAGCCCGGAGCCTCGCAGCACGTTTCACGCAGCCGTGCAGACCCGGTGCCCTTGCAGCTTCCTGGGCCATAAAGCTTCTCCGAAGCCCCAGCAGAGACCAACTCCTCCGTCAGCGCGGGAGGCACTGCAAGCCTGATGACACACACAGGAAACGCCTAACTCTGGTGTTTTAGCAGCAGGAGGAAAACAGGTCATTACTAAATCCAGTGGCCTGCCCATGGTTTTAGATTTATTGGAGACTTTTTAAAAATTGGGTTTGTTGTGGGAATTCCCTGGCGGTCCAGTGCTAAGAACTGGATGCTTTCACTACCAGGGACCTGGATTTAACCCCTGGTCAGGAACTGAGATCCCACAAGCCATGAGGTACCTGCTGCTCCCCCAAAAAATCAGGTTTTTTGAAGGGCTTCTGGCATAATTTCTAAAAGAAGGGAAACACTCACTGAAATTTAGCACACCCATGATTTCTGCCAACATCCCCAGTATTTGGGTTTTGTAGCCATGCACTTCATCTGTTCAACATGTTCTGCTGCATGTGCTACATGGAATGCTTTACTTAAGCAATTAGGCAAAGTAAATGCCACGAAAGGTTCAAAACCCAAACAAAGCCAGTTAGCTGCACGATGCCCACCCTTTGTGTGGACGGTTGGGTCTGGACAGACCCAGCAGCCAGCGCCATTCTCTGTAAAGGGAAGGGATGACTCTTAGGCTGGGACTCTGCCTTTATGGCTGACGTGTGTTCAGAGGAAAGCTCTTGTGTCCAGTGGGGCAGCTGAGACTCGGCTTTAGGCCAGACCCTGGGCTCCGTGATCCTGGCGATGGACAGTCACTTCTCAGAACCTTCATCACCAGTTCTGACTAACTGCTTCATCTGGGAAAAGGGAACTTCAACTTTTCTACCTTGACCCAAACCAATGGAGGGAAAATTAACGTTGGTTAATTTGAATTGTTACCTTATTGCTTATCCTGTGCCTTAAAGTGTGAAGTGTGAGGCATTGCTTCAGGTTAGAACAGAAGACGCCTCACAGCAGAGTTCACCACAGTTTATTCCTCGTCAAGGGTCAGCCCTCCTCTGTCAGGAACTGTTGAAGCCAAATGCAAACACTGGTTGTTTGTACGCGGTTGTTGCTTTAACGCCATTCTAGCTGGACCACCCCCTGCAGATGTAACACAGCAGAGGGGTTTTTTTGTTTTTGTTTTTTATTGTAAAATGCCCTTTTTGCTCAACTAATTTTACATGACAGTGCATGTATTTATTCAATAAAACTTTTTGTGTTACCTCGCTTGTGATTTATTCTTCCTTTGTCTTTTGAAGTAAAATGTTTAGTGTGGAACCAGGC EMBV3_03181 CAGGTAACTCTACAAGTACCATATAGGGAGTCAAGTGCTGGTACAGAGGTCCTGCAGTGG Gene BVT0102_075690 + 0 NULL GK000013.2:64373030-64466197 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043520 TCONS_00043525 TCONS_00043526 1 XLOC_025962 Coding TCONS_00043525 XLOC_025962 Coding Coding ITCH 13:64357825-64463073 = TSS32166 6095 1 TCONS_00043525_4 862 0.0118129614438064 25 0.942326147063574 0.000573835457963566 2.18653633574671e-08 6.40991232414275e-05 0.000148598386292296 0.000253751596337131 0.000169521381630553 0.000412648076124653 0.000228316697852143 9.93826403750139e-06 1.28205123395651e-08 5.82105731968924e-18 3.53455867436036e-37 0.00019993893108003 6.65847686424899e-10 0.00016866174016831 0.00184624683395641 0.00106711436301177 0.00200472936267511 0.000287491444351471 0.000660906324618351 0.000169864372547814 0.00279559688209519 0.000615189044876756 0.0030023996929311 1.72258641138185e-05 7.47055166652787e-07 0.000135419167506007 0.00011777720730315 3.01303644900139e-27 3.62017649933892e-15 NM_001082428.2 ITCH Bos taurus itchy E3 ubiquitin protein ligase homolog (mouse) (ITCH), mRNA. 0.0 9384 99.98 0.853978671041838 NM_031483.5 ITCH Homo sapiens itchy E3 ubiquitin protein ligase (ITCH), transcript 0.0 4747 90.14 0.569811320754717 TCONS_00043525_4 sp|Q96J02|ITCH_HUMAN ITCH_HUMAN E3 ubiquitin-protein ligase Itchy homolog; 0.0 1684 92.47 0.998839907192575 3 coding 0 0 0 0 -0.0210935694121561 0.840780335750861 -0.00909779093368066 0.858372593873072 GAGCTGTGGTCCGGGCTCGGGACCGGCTGCCATCTTAGTCGAGGGACTGAAGAGTAGCCGCCGCCCCGAGTCCCGGTAACATGCATTTAACCGTGGCCTTCTGGAGACAGCGCCTTAATCCAAAGAAGTGACTTCAAACGGTGAAAACTTCAGGTTTGCCTTCCTGTTGGTGATATGTCTGACAGTGGATCACAGCTTGGTTCAATGGGTAGTTTGACCATGAAATCACAACTTCAGATCACTGTCATTTCAGCAAAACTTAAAGAAAATAAAAAGAATTGGTTTGGGCCAAGTCCTTATGTGGAAGTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAATGCAACAATACGAACAGTCCCAAATGGAAGCAGCCTCTTACAGTTATTGTCACCCCTGTGAGTAAATTACATTTTCGTGTGTGGAGTCACCAGACACTGAAATCTGATGTTTTGTTGGGAACTGCTGGATTGGATATCTATGAAACATTAAAGTCAAACAATATGAAACTTGAGGAAGTAGTTGTGACTTTACAGCTTGTAGGTGACAAAGAACCAGCAGAGACAATAGGAGATTTGTCAGTCTGTCTTGATGGGCTGCAACTAGAGTCTGAAGTTGTTGCCAATGGTGAAACTGCATGTTCAGAAAGTGCTTCACACAATGATGATGGCTCCAGGCCCAAGGATGAAACAAGAGCGAACGCAAGTGGATCAGATGACCCTGAGGATGCAGGGTCTGGTGAAAATAGGAGGATCAATGGGAATAATTCTCCATCACTCTCAAATGGCGGTTTTAAACCTTCTAGGCCTCCAAGACCTTCACGACCACCTCCACCTACCCCACGTAGACCAGCATCTGTCAATGGCTCACCATCTACCACTTCTGAAAGTGATGGCTCTAGTACAGGCTCTCTGCCACCAACAAATACAAATTCAAGTACATCTGAAGGAGCAACATCTGGATTAATAATTCCTCTTACTATATCTGGAGGTGCAGGCCCTAGACCATTAAATCCTATACCTCAAGCTCCCCTCCCACCTGGTTGGGAGCAGAGAGTGGACCAGCATGGGCGAGTTTACTATGTAGATCATATTGAAAAAAGAACAACGTGGGATAGACCAGAACCTCTACCTCCTGGCTGGGAGCGGCGGGTTGACAACATGGGACGTATTTATTATGTTGACCATTTCACAAGAACAACAACGTGGCAGAGGCCAACACTGGAATCAGTCCGGAACTATGAACAATGGCAGCTCCAGCGTAGTCAACTTCAGGGAGCTATGCAGCAGTTTAACCAGAGGTTCATTTATGGGAATCAAGATTTGTTTGCTACATCACAAAATAAAGAATTTGATCCCCTGGGTCCCCTGCCGCCTGGTTGGGAGAAGAGAACGGACAGCAATGGTAGAGTATATTTTGTCAACCACAACACTCGTATTACACAATGGGAAGACCCCAGAAATCAAGGTCAATTAAATGAAAAGCCCTTACCTGAAGGCTGGGAAATGAGATTCACGGTAGACGGAATTCCGTATTTTGTGGACCACAATAGAAGAACAACCACCTATATAGATCCCCGCACCGGAAAATCTGCCTTAGACAATGGACCCCAGATAGCCTATGTACGGGACTTCAAGGCAAAGGTTCAATATTTCCGTTTCTGGTGTCAGCAACTGGCCATGCCACAGCACATAAAGATTACAGTGACAAGAAAAACATTGTTTGAGGATTCCTTTCAGCAGATAATGAGCTTCAGTCCTCAAGATCTGCGAAGACGTTTGTGGGTGATTTTTCCAGGAGAAGAAGGTTTAGATTATGGAGGTGTAGCAAGAGAATGGTTCTTTCTTTTGTCACATGAGGTGTTGAACCCAATGTATTGCCTGTTTGAATATGCAGGGAAGGATAACTACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTTCGTTTTATTGGCAGGTTTATTGCTATGGCTCTGTTCCATGGGAAATTCATAGACACAGGTTTTTCTTTGCCATTCTATAAGCGTATCTTGAATAAACCAGTTGGACTGAAGGATTTAGAATCGATTGATCCAGAATTTTACAATTCTCTCATCTGGGTTAAAGAGAACAATATTGAGGAGTGTGGTTTGGAAATGTATTTCTCCGTTGATAAAGAAATCTTAGGTGAAATCAAGAGTCATGATTTGAAACCCAATGGTGGCAATATTCTTGTAACAGAAGAAAATAAAGAGGAATATATCAGAATGGTAGCTGAATGGAGATTGTCTCGTGGTGTTGAAGAACAGACGCAAGCTTTCTTTGAGGGCTTTAATGAAATTCTTCCCCAGCAGTATTTACAGTACTTCGATGCAAAGGAATTAGAGGTTCTTTTATGTGGGATGCAAGAGATTGATTTGAATGATTGGCAAAGACATGCCATCTACCGTCACTATACCAGGACAAGTAAACAAATCATGTGGTTTTGGCAGTTTGTTAAAGAAATCGATAATGAGAAGAGAATGCGACTTTTGCAGTTTGTTACTGGGACCTGCCGACTGCCAGTTGGAGGATTTGCTGACCTCATGGGGAGCAATGGGCCACAGAAGTTCTGCATTGAAAAAGTCGGGAAAGAAAATTGGTTGCCTAGAAGTCATACCTGTTTTAACCGCCTGGACCTGCCACCCTACAAGAGCTATGAGCAACTGAAGGAAAAGCTGTTATTTGCTATTGAAGAAACAGAAGGCTTTGGACAAGAGTGAATTCTGAGAGCCTGCACCACCAAAGGACAAGAATTTATTTGCAACGTTTGTCCTTTTCCTTCTTTGCCTATTGCACACTTGTAAAATTGGACTGTGACTGTTTAGAGAGTTATCTTGAGTGTAAGTAAATTAATGTTATCATTGAGATTTATCTCCCAGTGATTCTGGGTTTCTTCTCAGTGTTTTCAGAAATCAGATCTGCAAATGACTTAGTCATAAACCTTACTTACCATGAGATTAACACAGCAATGAAATCTGCCTTGTCTTATTCCACTAGATTGTTTCCTTAACAAAAAATTTGTGTCTCAGAAGTCTCACTTAGGTTTTTTTTCTTTTAGAGATTCTGAAAATATGCAGGGAATTTCCATGGTAACTAAAATATATAGGATCTACCTATTAAGCCTCATGGAAAGAGGTATTTGTTTAAAACAGCCCAGCTTCTGGGGTTGTGAGCAAACTTCCGGCTTGTGCTCTCCCTCTTCTTTCAGCCTGGCCTGACTGTTGTTTTTCCTTTTCGGAGCATGAAATCCATGCATCATTTGATGTTATCCCTAGAAAAGAGATGCTAGACTCTTGTATCTCTCCACAAAGTAGTTTTGTGGAGAAGTTGGTCCCGGTCTGCAAATGACTTCACTTAGAAATTTGATTGTTTTAATTGCCTCGCAAATACTAAACTTGACAAACAATACTGACACTATGCTGCCTTCACTGTAGAGAAAAAAAAAAAGTTAGCCAATTTTTGAAATTAATTTGGGTGACTTTATCGAAGGCCATTGACAGTTTTTGTGTGTTCCTGTATATCAATTCCATCTTTAAATTTTATCATAATCCAACAATTCCAGTTACATTTAACTCCTGCTAAGGAGTTCAAATTAGAGTGCTTTCTAATCCAAGTAGAGGTCAATGAAAATATCTATAAAATCATTTTCATTAGGGAGGAAGAGCTGTGGTACTGGTTAAAAAAGTGAGTAAATGCATTTACAGCAATACATTTCTAGTAACCACAGAAATGTATTGTCTGTGTGAATTAAAACTTCACAGATTGACAATTTATCTGACAAATGTTATAATAGTTACTTCCATTCTGTCTTGTCCTGATTTGAATTTTCTGTTCACGTCTAACAATTTTAACAGGTTTTTCCCATGACCATTTAACATTAGATTGCTCTGTTAGTAACTGATTAATGCACTTTGACCTTCTCTGTGGTAATTTTTTTTAACTTAGCCTGCTTAGACTTAGCAAGATGACTGCTGTCAGAGGACAGTGGGAGAAAGCCTAAGCCAGCTGAGTGCCTATCATAATTGAACTCATAACCTAATATCTCATGAAATAGGGACTTTGGCAGGTTTCAGTAGCATAGCATGAAAAAGTAGCATTGAGCCAAAAATAAGCAAATAGCAAACCCCTGTTCTATTTGGAAAGGAAATGGGGGGTTTTGTCCGTAACTACTCTTATCTTGAAACAACGACAAAAGCATTTTTTAACTTGTATATCTGTATTCTAAAACACTGCCATCATAAAGCAGACATGTGAGTGAAAGGGTTGCCTCATCCAGAAGTCGTTAGTGTGAAGGGAGAGATTGGGCTACCCCCAGTCCTATCTTAATTTTGATTTTATTCTACATAGTCTAGGAAATGTACTATGGTCTCTAAAAGCCCTAGTTTTCAAAGTGACTCTGCCTTTTTGTTGGTAGGGGGCAAAAAACACTATTGCTTTGTCTTACAGAGCGAATGTCTGCCAACTACCCATTCGTTATATGTCTGAACTTTGGTAATATATGGCTATGGAGATTAAACCTTCTATAAAGACTTCCTATTGAGGTGAATGCTCATATTGAAATGTAGTTACCTACAATATTTACTAGAGATTTATGAGATTAAATTAAGAGATAATGTAAGAAAGTAGACTTTTTTGTTCTACATGCTTGATGATTCATTTAGGGACCTAGAAATATTGTGCGAAAATGTATAAATATCATCCAAAAGGCTTTCTGCCCTATATTTTTAAAATACAGAATAGTTATATATGAAGTAGTCCCGGCCCTAGTTCTATAGGGCTTGGCTATTAATATTTTTATGGAAGAAATGTTTAGTTCTGGAAAAGGTAAATGCTTGTATATATTTTTGCAGCCTGGGATCTCCCTTACTCCATTTCTTCCTTTAATTTAAATGGCCACCTGTATATGTCTTTCCCTGCTGTGTTAGGAAAATGGGGGCTGGATATCCCAAGAATCAGAGGTTATATAAAAATACTGCAGATAGACAGCAGACATAAATATCTACCAAATGCTATCTTAAATTTTGGTCCAAACTGATCATTTGGAAATAGATTTATTGTAAGTGTTTAATTAGAGTGATTTCTTAAATCTGAACTAAATTGCTTTTAGAGTCCTTTTTCTTTGTAAGCATTGTAAATGCTAATAAATCCTGTTAATTTTTTTACTGCATGTTATGTTGAAATAAAAACAAAGTAAAATGAGCAATTGCCTTATTATTATTCTTCTGCTCTTTTGGGAGGTTGGGGAAGGCAGCGTTTCACATAGCCTGGGTGAGGAGGGAAGGACCTTGTTTTATCAAATAGATTGATTTAAAACTGGTCCAGCAGCTCATAATAATGAATTCTTGCTCTGGCTTTTATGATCTTAAATCAGAGTGCAGGAGAATTTTAATTTCATAAGACTTACAATAACTCTATTTAAAAGTTCGGGTACTAATTTTTCATCAAGAGATTGACATACCAGTGTCATTTCATCAGAAATTTTAGTGAAACATGACTCACCAGCTCATAGAGGTTCATCCTAAATCAACTATGTCAATTAGGCCCACTCTGCCAATTTTTTATTTACCTGGTTAATAACTTGAAATGTTACTAGGGATGACTTATGGAATTAGACTTCTGTTTTTATATCCCTCCTTGTTTTGGATGTAAATCCATCCTTTTAAATTCCTTTAAGTTAACTACATCTATTTAATATTGTTGGCATCTCCAGCCCCCCCCGCATTTTTTTTTAGTTGCTTTCAGAATTATTTGTATATATGCTATGCTTTTGTTAACCAAAAATGGAATAGCAGCACTGGATTGTATATTATTGTATTGGAGTTCCTTTGTTTTCTTAAATTGTAATTTCAAATACTCAGGTAACTCTACAAGTACCATATAGGGAGTCAAGTGCTGTTACAGAGGTCCTGCAGTGGGCTCCCTCACTTGTGTTTCCTAAAAGATGTAAGACTGTTTACAATTAAACTTTCTGGTCCTTCCTTTGTACACTTTGATATTAGTCTTGAATAAAGTTTTTCCCACCTGCAGGGAAGCCTTTTATGTGACCAGGATG EMBV3_04168 TGGCTGGGATTTGAAAAGAAAAATAATCAGGTTATACAGAAAAGAAGTTTTACAGAAATT Variant GeneID:534097|DPM1:NM_001076013:1201_cdna 506^574 1 EMBV3_12627 GeneID:534097 13 GENE DPM1 MGC140708 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit EMBV3_35233 GTGCATACACACACGGAAAAGGAGGAAGAAAATGCAGAAAAGGGAGGCTCAGGCATTCTG Gene BVV0102_067126 + 0 NULL GK000012.2:89568425-90032242 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037560 TCONS_00037561 1 XLOC_021415 NonCoding TCONS_00037561 XLOC_021415 NonCoding NonCoding - 12:89815672-89818220 - TSS27079 2548 4 TCONS_00037561_4 64 1 0 5.87366843595944e-05 7.88715685049748e-06 0.000167065966058743 2.28136459677648e-05 5.81300869216628e-06 0 5.38739960316561e-10 0.000118316297575211 6.66240053331772e-10 0 1.83965382562063e-10 0.000233816387303036 6.75650659036806e-06 0 4.04356082140365e-05 0 0 0 2.71244894033833e-05 6.19990466046179e-10 9.17000870760533e-05 0.000337833425190232 0 0 5.9652003222013e-05 4.70064791464262e-05 5.39436345155627e-10 1.50786282272141e-05 3.9908984833788e-10 0 0 noncoding 0 1 1 1 0.0107088775348119 0.93118052593308 0.0325244463464558 0.551455139866171 ATTTTTGAGCAAACTGTGAGTCACTTTTGTTTCACGGCAGCCTGCGAACGCCTCCTCTGAAAAGCCACACTCGGGACCTCTTTGGCTGATCCGAGCTGCTTTATTCCAGAATTCAGCCGGGAGTGAGTCGTTCCCAGACCTCCCTCGCACGGCCTCTGAATCGGCACCTAATAAACATGCATTTGGGGGAGAAGGCTGATGGGAGGGCCATCGCTTAAGTTCCTATTGTTTCATTGATAAAAATGATCCGGGAAGCGGCAGAATATGTTAGCCATTTCCTTTGGTTTTCCATCGAAGGCTGAAAGACATTTCTAAAATAGATCTATTTTCTTTTCATTCTGCAGAATAATGCATGAATGATTATAACATATGCTCTATCTCCCTTTTTTCCCTCCCCTCAACCAGTGGGAAAGTGCCTGAGACTGTAATCACAACTTGTTGGGTTTTCAATCTGATGCTGTCCCGTTTTATCATGGTAGTTAAACGTCCATTCTTGTTCGGTGTGATAAATGTTATGGCCGTGTAACAGTAACGAAAAAGAGAGACATGTTAAACCAAATATTGCTTCAGATTGTGTCTTTTATTCTCCTTTATCATCATATCTTAATTTATAGTATAATCATCATTATCGCAACTGTCAGCCTCATTTAACCCCGCTGATCTCCCATGATTCTCCGCCGTCAGGTCTGATTGCCTACCTTCTGCCGACGGGCTGATAATGCCTGACAGATTAACCCTCCCCAAGAGGAAGACAATGATACATAGGACAGCGCCGAGCGCGCTATATATTAATGAGGAGCTGGCAAGGCTTTGATAAGGCTGCAGAATAATCCATCAGTGGGGAAGGAGCTTGTAAAACGGGAGGAACGTTTCATGGGAAAACACCTGGGAAGGGTGTAACGACCCGGCAGCTAAACGCTGTCAGCTGCCTCTCCCCGCGTGTAATTAGCATCAGACAGGGCGCGCGGCTGGCCCGCGAAGTCCATCAGCCCCGGGACCCAGCCTCACTCGCTCCACGCTGGCCCCACCGCGCTCCCGCGTTTACAGCGTATTTAGCAAGCCGGCAATTAATAGCTCGCGTTCTTGGGCATCAGAAACTGTTTATCTTCTTCTGAACGTGCTCTCGCCGGAGGCTGTTACCTGGGAAAGGCAGGAGCCGCTGGCGTTTTCTGCCGCACTTACTCCACGGAGGCCGCTCCGCCATTAGATACAATGCCTCAGATGGCTACTTGAGCTTGAATGCACCGTTATTACAGGTATTATATGAAATTGCCTGTGTTATGTGAAGGGGATTATAGAGGTTCTGGATCAATAACTTCAGTGGATGTTGGGAGTGATTACAGCGCCCTGTCAATTTTCCGCATTTGGCTGTCAGTGTCCATTGACCACACACCACCTCTTGTATTCACATCAAATCACTCATTTCATTGGTAAATTCTATATATCTCAATTTACTTTAAGTAGCTGATTTGTGTAAAATAAAATGACTTCCTCTTCTGTGTGCGCAACAGATCTAATCCTATATAGTAATAAAAAGCATAAACACAGGGAGACCCTCTGTCCTTTGGGAAGCCTCGTGCAGAGCGCGGCGACTGCCCGCTCCCTGAAATAGCTATAATTGAAACATCTCCATCACCCGGGCTTTGTTGAGACCACACCTAGCCTCTTCATCTCTCCTTATTTTTCCATCGCGGGGAGGAATCTTGGAGCGGCCGGATCTCGAGCACCCGGACTCCCGAAGCAGCTGTGTCTCCCTGCACCCACGCCCACGGCTGCGCTCACCTTCTGCGCGAGGGGGCCAGGCCCCCACACCCCCGTGCAGACTCGGCCCCCACCTTAACTCCAGGACCGCAAATGCTGTCCCGAGAGATTCGTCTTCCACCAGTCGGCAGGCTCCTGCTAGGTGCAGAATGCCTGAGCCTCCCTTTTCTGCATTTTCTTCCTCCTTTTCCGTGTGTGTATGCACATGCACCCGGGCATGTTTGACGAAGTGTAACATCAAAACTTAGGAGAGAGAAGTCCAGAGGCATTCAGTGACGGGAAACGTCAAAGAGACCCAGGAAACGTTTGGGGAGGAGGTCTAGACTTCCTGTGTCAATAGAAACTCACTACAGGTGTTCAGACCACTGGAGAGATGGGGAAAGTATTATTCCACACACCTCAGCGTGCACGGGTAACATTTCACTCAGGAGTTGTCTTTTGGAACTTAGCTCGATGTCTTATCAGTGTTTCCTACTATTTCTGACCTAGAAGAGGCCCTTAAAGAACTGTGTACTGGCCACAAATAAATAAGGAACACAGAAACAAAGTATTTACAAAATCCTCCAAGCACCCCCCCCAAAGAAAGCCTCCCCACCAACTAAGCTTCCCACAGACAAATGGATCAACCACTAGATTCGCCACCTGTGAATGGGCACAGCTTCTGGTCCTGAAGCAATTCAAAGAACAGAGCAGAGAGAAGGAAAGGCTTGTTTATTGTCTGTCCTGGCATACAAGATCCTTTGCATAAAAATACAGACTCACCCTGCATCTCTTCATTTACTGCTGT TCONS_00035976 r 5' 213969 TCONS_00035976 r 5' 213969 EMBV3_29184 AGCATTTGTCCATGTGGCCTCCATTACCCCAAGTCCTCAGCTCAAGCAGTCTTCCCTTCA Gene GeneID:540106|PDGFB:NM_001017953:94_cdna Constitutive 0 NULL GeneID:540106 5 GENE PDGFB NULL platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog) EMBV3_41524 CAGCTGCACTCCACAGCCCCAGGATGCTTTTGAAACTTCAGTCAACGTGAATTGTACCCT Gene BVT0102_208058 + 0 NULL GK000015.2:9985712-10808005 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060551 1 XLOC_036768 NonCoding TCONS_00060551 XLOC_036768 NonCoding NonCoding - 15:10164569-10303848 - TSS45256 529 1 TCONS_00060551_1 83 3 0.996223380576976 3.60401509401664e-05 0 0.000892161477431003 0.00121658154362715 0.00082130730245371 6.76191883385766e-05 0.000138738117476134 0.000458418239271309 5.96606948962338e-05 6.87594272911049e-14 0 0 1.08479462672585e-05 0 0 0 0 0 0.000605450758397795 0.000326029372788866 6.31239962916382e-05 0 0 0 0 0 3.32276629898142e-05 0 0 0 NM_014361.3 CNTN5 Homo sapiens contactin 5 (CNTN5), transcript variant 1, mRNA. 2e-26 123 80.28 0.264650283553875 0 noncoding 0 0 0 0 -2.42878609584215 0.0751663283850181 -0.0810490108261001 0.243000685838342 CGCCCTAGGAGAATAAAGTCTATAAAAACTGACTTTCAGCCTGCTGTCTCCTTTGTGAAGATATTTGCTGCAGAGTCTGAAAAACAGTTTTGTTCCATGACATTGGACTTAGGGGAGATACAAGTTTTTCAAGGTAGAAGATGTATGTGGTGACCTTAAAGGATTGCTGTTTAGTGTCACTCAAGATCTACTAAGCATCATTTTTTGGATGACTGTGGCAAAAGGATATCTGTACAAAACCAGTTCCTTTCTGAAGTTTATAGTTGGGGCCCTGTTCTCAGACAGAAGAAAAGCTCTTCAACTACACAGAGAGGAGAGATCCTGCCACCATCAACTGTATCAGAGCAGCTGCACTCCACAGCCCCAGGATGCTTTTGAAACTTCAGTCAACGTGAATTGTACCCTCTGGAGATGTGAACAATCCATGTCACTTTACATGGTGACCTCACTCATTTTGTAGAACTTGTGCTTTGCCTTTTGGTGGGTTGAAAGAATATGAAATAAATGGAAATTCTCAGAAGTTGAAAGG TCONS_00060549 TCONS_00060550 s 5' 178859 TCONS_00060549 TCONS_00060550 s 5' 179099 EMBV3_24572 AGACAGTTGCAAATTCCTCCATGACCGCTCAGATTACAAGCACGGGTGGCAGATCCAACG Gene GeneID:518027|LOC518027:XM_002699079:48_cdna Constitutive 0 NULL GeneID:518027 29 GENE LOC518027 NULL similar to Zinc finger protein 183 EMBV3_09910 GAACCGGCGGATGAAGCATAAAAAGCAGCTGAGGAAAAGTCAAGATGAACCCAAAGCGCC Gene GeneID:615347|BSX:XM_002693035:293_cdna Constitutive 0 NULL GeneID:615347 15 GENE BSX NULL brain-specific homeobox EMBV3_14370 CCATTTTTGTTCTCATACCTCTCATCCTCATTCTCAGCTCCTATGGTGCCATTGCCCGGG Gene GeneID:784712|LOC784712:XM_002697441:31_cdna Constitutive 0 NULL GeneID:784712 23 GENE LOC784712 NULL similar to Olfactory receptor 2J3 (Olfactory receptor OR6-16) (Olfactory receptor 6-6) (OR6-6) (Hs6M1-3) EMBV3_26487 TTGCTGGAGCTGATAGCAGCAGACACCACCACTCACACAGCAACAGTCACTGAACCTGAA Gene GeneID:767843|POLR3H:NM_001076962:225_cdna UTR3_Alt 2 NULL GeneID:767843 5 GENE POLR3H MGC134502 polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) EMBV3_18269 GGGCCCTTCACCACCGGGTGCTCCCTGTCTGCTCCCTGGGCTCCCAGGGCCAGGGTTGGG Variant GeneID:535470|PIN1:NM_001034632:5_cdna 693^767 2 EMBV3_37906 GeneID:535470 7 GENE PIN1 MGC137201 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 EMBV3_02615 CTGAATAAGCTGTTTGGAGGAAAACATCAGTCAAGGAGGGTGGGGGAGTAAGAGAGGGTG Gene GeneID:617684|BAHD1:XM_002690791:228_cdna Constitutive 0 NULL GeneID:617684 10 GENE BAHD1 NULL bromo adjacent homology domain containing 1 EMBV3_14206 CACTGGGTATTTGTTGCTGTGCAAGGCTTTCTCCAGTTATGGTGAGCGGGGGCTACTCTC Gene BVV0102_196250 + 0 NULL GK000021.2:69347205-69418978 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38189 CGTGTCGTGGCCCCGTGAACTCACCACTCACTCTTCCCTCCAGACCCCACCTTTTTATAA Gene GeneID:282029|RAB3A:NM_174446:8_cdna Constitutive 0 NULL GeneID:282029 7 GENE RAB3A NULL RAB3A, member RAS oncogene family EMBV3_40053 TTCCTTGGACAGCATTCTGGTGTTCAGCAACCAGTGTGGAATATTTGTCATTAAATCCAG Gene BVV0102_103662 + 0 NULL GK000003.2:23798631-23813911 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169161 1 XLOC_103298 Coding TCONS_00169161 XLOC_103298 Coding Coding ZNF697 3:23767327-23802560 j TSS126730 5758 1 TCONS_00169161_1 550 0.0786731503994442 3 0.836654178019982 8.27022885818209e-05 7.15501647432227e-05 0.000104567551220728 7.11482661889236e-05 0.000165487535878429 0.000108094622353081 0.000159110527504822 9.80992598685676e-05 7.39957083606222e-05 2.14370932824772e-06 0.000146304365477741 3.72596678368897e-06 8.52112931285669e-05 6.69898769096919e-05 5.3269375413298e-05 0.00335916585369402 0.000886148084803564 0.0018083911923467 0.000135026928053246 0.000159865127220908 4.86891354312291e-05 0.000716108086927068 0.000798228454545711 0.000826878035095581 5.14213974781874e-05 6.60742680554694e-05 2.86372293835403e-05 0.000130949249659197 4.55277681242141e-05 8.45765862907064e-05 XM_005204046.1 ZNF697 PREDICTED: Bos taurus zinc finger protein 697 (ZNF697), transcript 0.0 9358 99.96 0.902222994095172 XM_005271315.1 ZNF697 PREDICTED: Homo sapiens zinc finger protein 697 (ZNF697), 0.0 4944 81.58 0.890934352205627 TCONS_00169161_1 sp|Q5TEC3|ZN697_HUMAN ZN697_HUMAN Zinc finger protein 697; 0.0 919 89.13 0.998181818181818 6 coding 0 0 0 0 -0.0697298346898897 0.756268850023366 -0.0216250923411511 0.682094609611914 CAGCCAGCCCGCGGCCGCTGCACCCGCCGCCGCTGCCGCCGCAACAGCAGCAGCACAAGGGCAGTTGCGCCGCGGCGCGGGGCTTGGGCCCGGGCGTGCGGTGCCCTCGCCCCTTGCCGCACCCGACGCCGCGCAGAGGTATCCCTGGTCACCTCCCTCATCCTGTTCTTCCTGGATGGAACAAGACGACAAACAGGGTGTGTGTGAAGCCCAGGACTCACAAGACAAGGGCATGGGCTCTGATTTTGAGAACTGTGAAGACAGGGAAGGGGACCCAGACGAAAGAGGAATGGGTTCTAACCCACAGGATGCAGACAAGAGAGAAGGGCACCTGGGGCAGGAGATGGGCTCCGACCCACAGGATGAAGCTCCAAGAGGACACTCAGAGGAGAGGGAACTGATGTCTAACATCTGCACAGAGGGGCTGCTGAGCGAGGAAGACGGGGTTGCAAGCCGTGAGGAAGAGGATGACCAATCTGGCGTAGTTGAGATGGCCATGTTCCCAGGGCTGTCTGAGTCCGACAGCATTTCCCGGAGCCCCCAGGAAGAGGAGGAAGAGGAGAGCGCAGGGGAGAACCGGCTAGAGGAGGAAGAGGAGCAGCCGCCCCCTGCCGTGCTTCCCTGGAGGCGGCACCTCTCCCTGGGGAGTCGGCACCGGGGCGACAAGCCTGCCCACCGCCGCTTCCGCCGCCTCCACCACCCCATGTCCATGGACCTCGGGGAGCTCGACAGCCTGATGGCCAGCATCATGGACGCGCCCACCATCTGCCCCGACTGCGGGGAGAGCTTCAGCCCTGGCGCCGCCTTCCTGCAGCACCAGCGCATCCACCGCCTGGCCGAGGCCGCCGCAGCCGCTAGCCTGGAGCCCTTCGGCTTCGCTGGCGAGTGCGAAGCGGTGGTGGGGATGATGGGCGTGGGCGGGGGCTTCGGGGCAGGGCCCGCGCTGGCCCGGCCCCCGCGCGAGAAGCCCTTCCGCTGCGGGGAGTGCGGCAAGGGCTTCAGCCGCAACACCTACCTGACCAACCACCTGCGGCTGCACACAGGCGAGCGGCCCAACCTCTGCGCCGACTGCGGCAAGAGCTTCAGCTGGCGAGCCGACCTGCTCAAGCACCGGCGGCTGCACACGGGCGAGAAGCCCTACCCGTGCCCCGAGTGCGGCGAGGCCTTCAGCCTCAGCTCGCACCTGCTGAGCCACCGGCGCGCGCACGCCGCGGCAAGCGGCGCAGGGCCGGCGGCGCTGCGGCCCTTCGCCTGCGGGGAGTGCGGCAAGGGCTTCGTGCGCCGCTCGCACCTGGCCAACCACCAGCGCATCCACACGGGCGAGAAGCCCCACGGCTGCAGCGAGTGCGGCAAGCGCTTCAGCTGGCGCTCGGACCTGGTGAAGCACCAGCGCGTGCACACGGGCGAGAAGCCGTACATGTGTTCCGAGTGCGGGGAGACCTTCAGCGTCAGCTCGCACCTCTTCACACACAAGCGCACGCACTCGGGCGAGCGGCCCTACGTGTGCCGCGAGTGTGGCAAGGGCTTCGGGCGCAACTCGCACCTGGTGAACCACCTGCGAGTGCACACCGGCGAGAAGCCCTTCCGCTGCGGCCAATGCGAGAAGCGCTTCAGCGACTTCTCCACGCTCACGCAGCACCAGCGCACGCACACGGGCGAGAAGCCCTACACGTGCATCGAGTGCGGCAAGAGCTTCATCCAGAGCTCGCACCTTATCCGCCACCGCCGCATCCACACAGGCAACAAGCCGCACAAGTGCGCGGGCTGTGGCAAGGGCTTCCGCTACAAGACGCACCTGGCGCAGCATCAGAAGCTGCACCTGTGTTAGGGCTGGGCCCAGCGGAGGCTACCCTGGGCGGGGCGGGGGTGGGAAATCACGTGGGGAATAGGTGTCCTGGGGACAGACCCTGTAGAAAGAAACGGGGAAGGGGGGCGGGAGGCACAATCTGAGAATGACTGGGGAGCCTTTTAGGTGTTAGGAGTCCCGAAGGGGTGGGTTGAATAAGAATTGTTCTTTGGGAGGGGCTGTATTTTGCCTGCCTCCTCCCTAACGGTGAAATGTTTGGGAGATGTGCTTGAGCGTGGTGATTTCATCCAGTGCACGCTGTAGGGAGTGAAGGGTGTGGAGGAGCAGGCATTTTGAGGACTTTTAGGAAGAGGAGATAGTGGGGTGGGGGAGGGTACAGGATGGCAGGCAGCACAGTAGGTTGGGCCGTGATGGCCTCTGGGAAGCAGGGAGAGGGTGTGGATGGAGTGAGAGTTCTGGGATAAAATCAAAGGTGTGCATGAGTAATTCTGTCCTGGCTTCACCAGGTATTAAGCCACTGTTTGCCCTGTTCCTCCCACATCAGCTGCAGTCCCACAAAAAGCAGAGGAACTTTGTCAGTCCTACAGGAGTGGATATTTTGTGTACTCTTCCCTTCCTTTCTCTGAGCCACAGTTAGCTGCTATATTGAGGCGTCCAGAGGAAACTGGGCAGAATTTTCAGCTACACACCCTCATTTCCAGGGCAGAATCTCTGAGGTTTAGAAAATCATTCGTAACTGGTTTTCAGATCAGGGAGCTCTTGGTACTGCTCCTGGTTCTTTGCTACTTTAAAACAATCTAGCCTCATGCTGGATTAGGCTGGTCTGTGTGGATGACCAGACCCCCACCCCTGGTGTCAGGTGTGTTCCAGGCCCAGTGTTATTTCAGGTCTCATCTGTGGTCTTTAAGTGCTGGGAAATGGAACAATTCCAGCCATGTGTGACTCTTCCTTTCCCCAGGTCAGCTTGATGCTTGTGTCAAGTGAAACTCGGGCCATCAATGGTTGCCCTAGTGACCTGCTGCAAAAGTCAGTTTGCTCAGACTTTTGCTGGCCTTCTGTGAGAAATCCAGGAAATCAAGATGTTCCCATGTCGGGCCACAAGGCTCCCTTGTCTCATTTGTATCTGTGTACCCCTCCCCCTCTGCAGTGACTGGGGAGCTACTCCAACTCCCACCTCCACCCATATGGTTATGGGCTCTGGTCTGAGCAGAAATTTCTCTTTCCTACACAGGGAGGCACAGTAGAAAGCTCAAGACTTTACACAAGGAGGGCACAAGCAGGGAGAGGTATAAATGCAAAATTGCCAAATAGCACAAGCAACAAGTGTTGTCTGGTGGTTCTATAAATGCCAAAATAGCACTTTTCTATTTGTAAAGTGCTTTATGCTTTTGAATGATTGTTAGTTGTTTCTCACGTCTTTGTGAGGTAGGACAGTATTATGACCCCTGTCTTAGGGAAGGCCAGGGGACAGGAGTGCGACAGGCGGTTCTGAAGAGAGGCAAACAGCAGTGTGGATAGGTGGGTCTGACCTACTGTGCTCTCCAGTTCAGCTGCTAGGAAGACTGACCTATTGTGATGTATGTAATATAAGGACACTGAAAATTCTTATGCTTGATGGAAAAACTTAAGGCTAGTCTAGAAGGGCCAAAGATGTCCTTGTTGACAAAGCTGGTCTTTGTCATGTAATTAGCATGTCCTGGACATGTTCCATTTCTAGTCGGGGCTGTAGATGACTCTTGTACAGACTTCAGTGACCTATGCTGAAAATCCCTCCCTTAGGGTTAGCCTTTAGAAGGTAGAGTTGTGGAAAGCGGTTTTGTTTTCTTTATTAGTGATTGTTACCCTCTACTTTTCATGAAAGCATCTTCACAAACTGTTGGACACACTTGACGAGGAAAAAAAAAATCCACAAGATTGTTTTTGTTGTTTTAGCAAACTTTCTATGGATGCTGGTAAGTTATACTTGGTTGTACTTTAGCAAAGAACTTCTTTGGGGACTGTAGGAAAGCATGTTTTTGCCATCATAACACTTAAAAAAAATTCCTGAGAAATCTGGGTTTGTATAATGCCTGTTGATCTTGCTCTCTAAATTGGTTTATTGTTATTCACAAATGCAAATAGATTTTTAAACTATAGATAGTTTTGGAAGATACTAATTCCTTTTTTATTTTGGTTGAGAGTAATCTGAGCAAAGCAAGTGTCCATTATTTATTCTGACTCTTGAAGTCTGAATACTAAGTGTGTAAGACTCACATGAAAATAATATAGCCAATTTGTAGGTAATCTTATTCCTTTTTTTTTTTTAAATGCACATCTACCTCTTCCAGCTGTTTTAAGTTCTCTCAAGTCTGTGCCTATGAAATCTCATCCAACTTTTGGTTATTCATGGGTTTATGATCCACATTCTGGGTCACTTGGTCTTTTGCTGACATTTTCATACTATTGCAGTCTCATCCACACCAGCTGTCAAGCATGGGTTCAATGGGAAGAGGAGACTGAAACTATTGTTCAATAATTTACTGGCAGTGGAAATCTTTGGATGTCACTGACCTCCTCCGTTCTTTAAGTTACTATAGATAAGAAAGCCAGCTACTACTTCAGGATCCCTTCTATGAGTGCATCCCTTAGCAAAAGAAAACTGTCCAGCCACCAGCACCCTACTCATGGTGCATCTAAGATGTGATTCCATTTTCCTTATGATTCTTCAGGGAGCATAGCTGCATTAAGTGAGGTTAATTGCATTCAGGAAGTTGTTTCTTATATTAGTCCTAGAAAATTAGTATTTCTAAAGCAAACCCTGGTAACTGTGGTTCACCCTTAAAAATGTTCATCTGAAGACTCCTTCTACCAACTCATTCATGATGGTGGAGGCAAATGTATCATTTGTTTCCTGGGGAGCTGGGTCAAGTGCAGGCTGCACTTTTCTGAGAACAGAGAGCAGGTTTAAATAGGTTAAATGGCTTGATTAAATATTGAGCGCTGAGTTGGAAGGAGAAGATAAGTTAACCCCTTGAGCCATGTGGCCTCTTTAAGATCCTGAGGCTATACATATGTGAAGAAGTACAAATTAAGAACCTGTGTTCATAGACAATCGGAACTGTGTTTCTGAAGTTTGTGCACATTTTCCTTCACTGTAATGTTATTTTACAACTGTTTGTTATAATAGTGAATAATTTAATGATTTAAAAATAACAGGTTTTGTGTGAGTGTGTGCTTGTATATGTGAGAATTGCCTTATTTTCAGGTTGTTTTATTTAAATGATGGTTCCTTGGACAGCATTCTGGTGTTCAGCAACCAGTGTGGAATATTTGTCATTAAATCCAGATCAGTCTTTTACCATGTCAGTCTTTCTTCTTTACCCATTAAATAGCACTTGTCACCCATTAAATAGCACTCAGTTCAATCTATGGAAGTTATGCTCTGGTAGAACAACGGTCAGCAAGATGCCAAATCCAACCCTTCCCTTTGTGTGAATAAAATTTTACTGGGAGACTTCCCTGGTGGTCCAGTGGTTAAGAATCCACCTTTCAATGAAGAGGACTTGGTGTGATCCCTGGTCAAGGAACTAAGATCCCGCCACAACTGGAGAGCCCAAGTACTGCAGCAAAAGATCCTGAGTGCCGAAACTGCTGCTGCTGCTGCTAAGTCGCGTCAGTCGTGTCCGACTCTGTGCAACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACGCTGGAGTGGGTTGCCATTTCCTTCTCCAGTGTGTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCCTAGCGATCCCATGGACTGCAGCCTACCAGGTTCCTCCTCCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCGCCGAGTGCCGAAACTAAGACCCAACAAAGACAAATAAATTTTTTTAAAAAAATTAT EMBV3_34363 CTCTCAACTACACACTCATTGTCAGCAGAGCCACCTGCACACAGCTGGTTTTAGCCTCAA Gene GeneID:522554|LOC522554:XM_002685948:130_cdna Constitutive 0 NULL GeneID:522554 3 GENE LOC522554 NULL similar to putative olfactory receptor 10J1 EMBV3_05509 CGCTCCCAGGCAAAGGCCACTCCGCCCACAGCTTATCCCCTTTTTGTTTGGATGCAAAAA Gene GeneID:100140500|SAMD11:XM_002694195:693_cdna Constitutive 0 NULL GeneID:100140500 16 GENE SAMD11 NULL sterile alpha motif domain containing 11 EMBV3_39356 GCTGGCTTTTCCTCTGGCCATACCATTTTGAGCATTAACCAGAGTACCTCTACTCTTAGC Gene GeneID:613669|TMEM167A:NM_001114511:21_cdna Constitutive 1 NULL GeneID:613669 7 GENE TMEM167A MGC139722 TMEM167 transmembrane protein 167A EMBV3_02959 GGAATGAGCTTTTCCCCTTGGAGGTGTCAGGAGAAAGACTGGTCTCAGGGGACAGAAAGA Gene BVT0101_005086 + 1 EMBV3_23836 GK000003.2:98110670-98190150 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03148 GGACGAAGAGCTGCGGCTCCTCCTGTGCGGAGCCTACCTGGATGTCGACATCACTCTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25118 TACTTCCGGGGATCCTATTCATACACACAGGTGGGCTCAAGTGGGGCAGATGTGGAGAAG Gene GeneID:527211|SMOX:XM_002692381:285_cdna Constitutive 0 NULL GeneID:527211 13 GENE SMOX NULL spermine oxidase EMBV3_05276 GTGAATTACTTGAAAGTCTTTTGCCTATGTTTTCCTCTAAGAATTTTACATTGTCTGGCC Gene BVV0102_328337 + 0 NULL GK000015.2:48372969-48381676 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22636 GAGGCGTGTACAATGGTGCTTCTGTGCTTTTTTTCCCTTGTAACCCATATACCAGATGCG Gene GeneID:522917|RIOK3:NM_001075836:25_cdna Constitutive 5 NULL GeneID:522917 24 GENE RIOK3 MGC138071 RIO kinase 3 (yeast) EMBV3_23152 CCCTCCTCCATTCTTTCATCTTCACTGTGGAATCCTGCAGACAGTGTGAATCTTGTGAGG Gene BVV0102_064270 + 0 NULL GK000030.2:32437313-32519259 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15054 AATGAAGTCCTCCAGAGCTTTCTGCAGTCACAGGTGGTAGTCGAGAAATCCATCCTGCAG Gene GeneID:513659|GBP7:XM_002686262:77_cdna Constitutive 0 NULL GeneID:513659 3 GENE GBP7 GBP6 guanylate binding protein 7 EMBV3_27532 CCCAGCAGCTGCTGAAGACAGCTCTAAAAGGCAGAGAGCAAGCAAGCGGGCCAGAGTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19984 TAACAAAGGCTTGAAGTTGAGGAGTGCCATGTTGCTGTTGGTCTCCCCATGGCTGTTCTG Gene GeneID:533526|CCNE1:XM_002694914:1012_cdna Constitutive 0 NULL GeneID:533526 18 GENE CCNE1 NULL cyclin E1 EMBV3_19811 CCGCCAGTATAGCGATGCACCACCTTTGACATTGGAGGGAATCAAGGACCGTGTTCTTTA Gene GeneID:327702|NDUFAB1:NM_001040488:300_cdna Constitutive 0 NULL GeneID:327702 25 GENE NDUFAB1 MGC127017 SDAP NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa EMBV3_40891 GAGCACCCCCAAGATGGGAACTCTGTCCTAATGAAGGCTGAAATGACCACGGTTGATGCA Gene GeneID:100140553|GJB4:XM_002686487:573_cdna Constitutive 1 NULL GeneID:100140553 3 GENE GJB4 NULL gap junction protein, beta 4, 30.3kDa EMBV3_26343 CATAGGAAGGGGTAGGGGAGAAGTTCATTCACAGAGAAACCCAAGGGGCTTATCACCAGA Gene GeneID:526291|SLC13A3:NM_001080288:1159_cdna Constitutive 0 NULL GeneID:526291 13 GENE SLC13A3 MGC140507 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 EMBV3_08425 AGCTGCAGGAGACCCAGCACCTGCTTCATGGTGGCCTTAGACATGCATCTGCCAGCATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15284 TACCAAAGAGGGGTCGAGGTTGGATGCTGGGGCTTGTGCATCAACTCTATGTTCTCCTCA Gene GeneID:538746|SLC45A2:XM_002696386:118_cdna Constitutive 0 NULL GeneID:538746 20 GENE SLC45A2 NULL solute carrier family 45, member 2 EMBV3_43360 TCCTCACTCCCTCTTCGCCGCAGCACCATTCAGCTCATCAAACTGAAGAACCCTGATGAT Gene GeneID:100140203|LOC100140203:XM_002688223:128_cdna Constitutive 0 NULL GeneID:100140203 6 GENE LOC100140203 NULL similar to hCG38791 EMBV3_40779 ACATGTATTCCATACACACATAGACACACTGTGGTTTTCTCACATGTTATTCAGGCTATC Gene BVV0102_203395 + 0 NULL GK000030.2:111430772-111447167 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245488 1 XLOC_150740 NonCoding TCONS_00245488 XLOC_150740 NonCoding NonCoding LOC100300003 X:111326261-111435837 x TSS184269 881 1 TCONS_00245488_1 137 0.296254256526674 2 0.991978097193703 0.000330547386450467 1.54758534782106e-05 3.42829547697105e-13 4.48793105943165e-13 0.000119037806599154 1.05186476106651e-13 9.21731752743778e-06 4.82557293323774e-05 2.0228179240616e-13 1.85333810859851e-13 4.02039936390162e-14 0 1.03396914655983e-13 1.11035595410241e-13 2.97553410802691e-09 0 0 0 3.57628184961861e-05 0.000318971443111709 8.41941968515111e-05 0 0 0 0.000125158974622863 1.16703175031413e-05 3.15630153756811e-09 7.61301132569751e-13 5.65348412753644e-13 1.16625698909975e-12 XM_617121.6 SLC9A4 PREDICTED: Bos taurus solute carrier family 9, subfamily A (NHE4, cation proton antiporter 4), member 4 (SLC9A4), mRNA. 7e-40 168 84.52 0.17366628830874 0 noncoding 0 0 0 0 GTTAAAAATGCAGAGGCTCCTACTTCGCCTCCGACCTAATGAATCACAGTCAGCATATTTAGCAAGAGCCCCAGGTGATTCGCATGCACAGAAAAGGTTGAGAAGCCGCCGAACTTGTAGAGGCTTCTGGGAAAAAAAGCTAAGCGCCCTCCTGAAAGTTGTGTTTTCGTCTCGGTCACTTTGGCGTTCTCAGTCTTCTGAGTGTTTCATCCCAAAGGCTGAGGGATTTGAATGCAGTAAAACAATGAAGTGCCCCATAGGGAAACTTTTCCTCAGCCTTGGCTGTCGGGTTGTTTTTTTCGGAATCCCCAGGAGTAGAAGTTCAGAGAACCACACCAGGATAAGGCTCCTCTGTCCATGGAATTTTCCAGGAAAGAAAACCAGGATGGGTTACCGTTTTCTCCTCCAGGGATCTTCCTGACCCAGGGATCAAACCCGCGTCTCCTGCATCTCCTGCATTGACAAGTGGATTCTTTACCACTGGGCCAACTGGCAAGCCCTTCTCTCTGGGACACTTGGATTTATAAAACTATTTCATAGCTAGATGACGTGGAGCATCCCTCAGACTGTGTTCTTGCAAAGGACTGCTTTTGAGTCAAATAAATAAGAGAAAGCAGGTAATAATATAATATTATAACTCTTTTTGCAAAAATATGACATCTCAATTCACATTTTGTGATAGCCTGAATAACATGTGAGAAAACCACAGTGTGTCTATGTGTGTATGGAATACATGTATTTGTATGATTTGTATGTGAATATTAGCCTTTGATTGCTAAGAGTTACTTTCGCTAAAATTTATACCTTACTGTGGATTGTGGTATGGATATATATTAGCCAGGTAAAGTAGACCTTAGTGGGAACATGCATCTTGGCCGACT TCONS_00248010 TCONS_00248011 TCONS_00248012 r 5' 228 TCONS_00248010 TCONS_00248011 TCONS_00248012 r 5' 228 EMBV3_35871 GCCCTTTCTGCAGTTGGAAGGTTTTCTTTATATACTATTCCCACCATGGGGAGCGAAAAC Gene GeneID:505025|ID2:NM_001034231:54_cdna Constitutive 0 NULL GeneID:505025 11 GENE ID2 MGC128089 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein EMBV3_15857 TCACTAGTCATTACCAACCAGGGACGGTCATACACGTTTCCCCCTTTGTGGGCCTGATCT Gene GeneID:513620|TMEM127:XM_002691132:131_cdna Constitutive 0 NULL GeneID:513620 11 GENE TMEM127 NULL transmembrane protein 127 EMBV3_22248 CCCAGCCCTTGCCTTCCCATACCACTGACGGAGCTGCAGTATTTGGCTCTTTTCTGTTTA Gene GeneID:534915|ASCC1:NM_001076041:374_cdna Constitutive 1 NULL GeneID:534915 28 GENE ASCC1 MGC139403 activating signal cointegrator 1 complex subunit 1 EMBV3_24190 CAGTGGTGACCCTGTTTTATGGAAGCATCAGCTATGTCTATTTCAAGCCCCTGTCCAACT Gene GeneID:785392|LOC785392:XM_002691589:133_cdna Constitutive 0 NULL GeneID:785392 11 GENE LOC785392 NULL similar to olfactory receptor OR9-27 EMBV3_18392 CTCGTGCATTTCTGTGAGATGAGGAATTACATCGTGCCTTTGTGTGAGTGCAGACACTGC Gene BVV0102_135064 - 0 NULL GK000019.2:11763676-11865526 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098731 1 XLOC_058975 NonCoding TCONS_00098731 XLOC_058975 NonCoding NonCoding - 19:11770605-11771240 - TSS73107 635 1 TCONS_00098731_1 34 1 0 2.14262796271861e-05 0 0 5.23096600304617e-05 0.000124401420113724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.72879925281131e-05 0.000366141581296889 0 0 0 0 0 noncoding GACATGATCACTGAAAACACATGCCATCTGGAGTCTTGCTGATGGACGTGCAGGCCTCTGACAGCAGAAACCCACGTTGTCAGTTTGCCTTCAGCTTGCCTCACTGAGGTCTAGTCAGGAAAGGATCCTCTTCATTTCAAACGCTGGGGCGTGAATTACGCTGACAAGAGAAATAAAAGGGCCTTCTAACTGGCCTTATTATTCCAAAGTGTGAGCAACAGGGGGAGTTTTTCTAAAGGGGAGACTCAGGACTTCTGAAATCGCCTTTAACCAATTCTCTTCTTAGAATGAATAACATCAGTAGAACCTGTTTTCTTGTTTAAAACAATGTTTGATTGTCCTTTTCGACGTGTAGCTATTACCTAGAAAGTGAGTGCCGTTCTTCCGGTTCTCTACGTGACAACTTGGATTAACTCGTGCATTTCTGTGAGATGAGGAATTACATCGTGCCTTTGTGTGAGTGCAGATACTGCAGTAGTACAAAGAGAAAACAGGACTTTACCGTGTGCAGCAAGAGAGAGACTGACTTCAATTAGGAAGCCTCTCAGGGAAGCAGCCAGGAGCCTCTCCACCTGAACCAAGTTGGGGAGACAAGTGAGGTTTGGTTTTAATTGGTGCGGTCTGACCACGCAAAT TCONS_00095150 TCONS_00095151 . 3' 94177 TCONS_00095150 TCONS_00095151 . 3' 94811 EMBV3_00825 AGCCTGCGCAGCCTCCAGCTGCTGCTCTTTTTCCAGGATCTTAGCAAGAACCCCGGCCTT Gene GeneID:525040|IL17RA:XM_002683626:2_cdna Constitutive 0 NULL GeneID:525040 5 GENE IL17RA NULL interleukin 17 receptor A EMBV3_09428 ACTTTCAAGGTTTCTGCAAAGCTAGAGAAGCAAAACTGCAGTATTTCATGCTTCTGGGAA Variant GeneID:614818|C5H12orf50:NM_001038203:41_cdna 81^200 1 EMBV3_43663 GeneID:614818 5 GENE C5H12orf50 C12orf50 MGC134438 chromosome 12 open reading frame 50 ortholog EMBV3_31639 ATGTCTCTGACCAGAGCTGAGAGGACCATCATCGTGTCCATGTGGAGCAAGATCTCCACA Gene GeneID:100138582|LOC100138582:XM_002683810:32_cdna Constitutive 0 NULL GeneID:100138582 25 GENE LOC100138582 NULL similar to Hemoglobin subunit zeta (Hemoglobin zeta chain) (Zeta-globin) EMBV3_34732 CTGTGTTGTCGTCAGAACAACCAACAAAAATACCAGAAGCCAAAGGAGGTCCTGGTAGCT Variant GeneID:516908|DPCD:NM_001075745:147_cdna 437^539 4 EMBV3_20468 GeneID:516908 26 GENE DPCD MGC137186 RP11-529I10.4 deleted in primary ciliary dyskinesia homolog (mouse) EMBV3_33385 TGAAAGAGCAGCGCGAAGAGGCAGCCGAGGTGGCTTCTTTGGACATTACCAACATCATCA Gene GeneID:539704|HIRIP3:XM_002698059:23_cdna Constitutive 0 NULL GeneID:539704 25 GENE HIRIP3 NULL HIRA interacting protein 3 EMBV3_38482 AAGATACTTGCTTCTCTGATCTCCGCACACAAGATGGTGCTGTCTCTGAAGTGTCGGTGC Gene GeneID:100138318|LOC100138318:XM_002698348:62_cdna Constitutive 0 NULL GeneID:100138318 26 GENE LOC100138318 NULL similar to MEA6 EMBV3_23817 GAGGGGGTGGCTTTGGCCGTGAACTGAATTCCAGAAACCCTTGCTCACTCATCTTGCTTA Gene BVT0102_062469 + 0 NULL GK000011.2:104798633-104860017 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21743 AGGTGTTGGGAGGCGGCTAGAGGATCAGGCCCATCTCACCTGGACGTAGAGACTGCATTT Gene GeneID:507932|COPS3:NM_001098904:487_cdna Constitutive 0 NULL GeneID:507932 19 GENE COPS3 MGC166268 COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis) EMBV3_18270 GCCATGTGCTTTTCCTGATACAGTGATCACTCCAGAACAACTGCACTGACCATCTAAGGC Gene GeneID:524821|SFT2D1:NM_001034551:20_cdna Constitutive 0 NULL GeneID:524821 9 GENE SFT2D1 MGC127023 SFT2 domain containing 1 EMBV3_12934 TGAAGCTGGCTGAGCAGAAGCATTGACTTTGTAGAGGTCAAGGAAGCCATACAACTGTGC Gene BVV0101_025807 + 1 EMBV3_23644 GK000010.2:59282940-59305356 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017423 TCONS_00017424 TCONS_00017425 1 XLOC_009030 Coding TCONS_00017423 XLOC_009030 NonCoding Coding LOC503858 10:59291481-59418619 x TSS11907 1284 1 TCONS_00017423_1 67 0.107476635514019 4 0.989932120468471 0.000156555564427825 0.000381522741697126 0.000418955680011821 1.15318019632068e-07 9.9491789864661e-08 1.54246233668677e-05 2.87017270222335e-05 0.000969616267784862 5.73001683816233e-07 3.50999098515518e-118 2.80006072004751e-72 2.17169238132182e-148 7.08603442880712e-71 1.1310017086069e-228 3.46869160719749e-94 3.59090667397357e-43 1.68288813675073e-253 0 6.91771854133794e-10 1.30499218228186e-08 2.72023656531576e-89 3.12235822860213e-120 8.20020719443973e-05 3.69514551535559e-12 2.91703695347569e-09 0.00020941383597324 5.89686165299717e-07 4.45114386904897e-43 6.26746767933184e-264 0 NM_174305.1 CYP19A1 Bos taurus cytochrome P450, family 19, subfamily A, polypeptide 1 (CYP19A1), mRNA. 5e-25 120 98.55 0.0529595015576324 0 noncoding 0 0 0 0 0.0180627183020175 0.909853801711607 0.0249030932950045 0.734349157576635 GTCCCTGAACAGGCTGCAAAGCTGAGGTGTCGGCATAGCTATGCCGCGCTAGGAACTCTTGTCTGGAGTTCCCGGTGGTGTACCTCCATCCTCGGTACCCTAGGAGCAAGACAAACCAGACTAAACACAAAGGACCAAAAAAGGTCAAGTGTGCTGGCCCATCTGCAGCTCCCTTGATGTGTGCTGAGCACTGCAGTGTTCTAACACACCTGTTCACTACCTCCTTATACCCATCCTGGTTCATGGAGGTGTGTGAACATCGGGACCGAGGCCATCTGACAATCACAGGGGGACCTGAGATCAGCTCAGCAACCAGTGACCCCAGGAACTTCTCCCTTCAGGTAACTGGTCTGGTGTCTGGTTTGGATCTAGTCAGATGAACCGTGTCTCCTGCCTAGCTGACAACCCACAGGAGGTTTCTATACACAGTAGGGACAAAGCCTTGCAATAGCGGTTACTTGATGAACCAGCTGGAGACAGACAGAGAAAGTTGTTGAAGCTGGCTGAGCAGAAGCATTGACTTTGTAGAGGTCAAGGAAGCCATACAACTGTGCTGATTTTATATTTCTTGAAAAATTAAGAGTTATCATATCTCCCTCCCCGTGAGGTCGTTTGAAGAACGGATAAGAAGAGGACAAAATACTGGTCTTTTGCCTTTGTGTGGAGCCCTAGATTCATTTCCTACTTAGTGTGTTGGTGATTGATGTTGAAAGAAATAACATGCTCTTCCATTAGTGATATAAACTTATGGAATGTATAAACTCTTGAAGTACTTATAAACACTTAACTATATAGAAGCTGCAATTGCTTCTCACTTACAACAGTGAGAAGCAGATAAAATATTCCCCAAATAAATGTTATCGTGAAAGTAATATATTTCTGGATTAAGTTAGGGAGACTTTACATCTTTTCACACAGATGTATCAGTATCAAAGTCTTTTCAAATCCATAGAAGTTCAAACATATCAGACCTTTCCACTGCTCAAGACTTTTTTGGTATCCTCTTTGGTGTGGCTTAACATAGCATTCTAAACATGTTTTTGATGTGTATCTGTTTATATGATTAAACTCACATTTTTATGCATATAACCTGAATCTAAGTTCACATGAAAAAGAAGCATATTCTTAGAAAAATTATAATGAAAAGATACTGGTCAGACCAAATATTAAAATATTATAAATCTATGATAATTAAAACATGACTATATCACTAATATAGACTAAAAAGCAAGGCAAATATATGCTGGAATTTATTACATTATAAAAGTTGTATCAGGTAGGGAA TCONS_00014231 TCONS_00014232 r 3' 8543 TCONS_00014233 TCONS_00014235 r 3' 1624 EMBV3_07661 GATGAGCCTGCAGAGCGCGCAGTATCTCCGGCAGGCAGAAGTCCTGAAGGCTGACATGAC Variant GeneID:537131|SMG7:XM_002694209:55_cdna 167^305 3 EMBV3_09416 GeneID:537131 16 GENE SMG7 NULL Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) EMBV3_40851 CAGGGCTGGAAGGTAAGGAAAATGTTCCCAAATGGTTTTAGAGTATTATAGTTAAGTGTG Gene GeneID:616080|RNFT1:NM_001076407:60_cdna Constitutive 2 NULL GeneID:616080 19 GENE RNFT1 MGC138043 ring finger protein, transmembrane 1 EMBV3_20573 CAGAACCCTGTACGGAAGACTGCTCTGGGTTTCCGTTCTCCAGTCACTACTCAGGTGTTC Gene BVV0102_055122 + 0 NULL GK000015.2:53152600-53159590 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059565 TCONS_00059564 TCONS_00059566 TCONS_00059563 1 XLOC_036455 Coding TCONS_00059563 XLOC_036455 Coding Coding ATG16L2 15:53137072-53156133 j TSS44682 5372 1 TCONS_00059563_6 572 0.170699925539836 18 0.71909758656873 0.000485224514662249 0.000284895866326071 2.26712700379447e-07 8.94320155732826e-08 9.42820575156351e-05 9.16163269839785e-05 8.58528908084905e-05 3.30306589202587e-05 0.000591302180663636 3.39961545156984e-05 6.12829866296049e-06 1.40605994400736e-15 7.25194599547884e-06 2.27970515296662e-17 1.05736624953517e-16 0.00225063095762874 3.28348434535613e-16 1.16562997192349e-16 0.000160299555613987 5.37733707178013e-05 0.000120416563125928 0.000792436315171216 0.000771211511488621 0.000378402577105067 0.000461960006863763 2.51578106278781e-17 7.38750642108605e-05 0.000385467135481803 4.88015735388721e-06 1.66131909701253e-09 XM_005216170.1 ATG16L2 PREDICTED: Bos taurus ATG16 autophagy related 16-like 2 (S. cerevisiae) (ATG16L2), transcript variant X1, mRNA. 0.0 8017 99.42 0.83265078183172 NM_033388.1 ATG16L2 Homo sapiens autophagy related 16-like 2 (S. cerevisiae) (ATG16L2), 0.0 2354 85.29 0.374906924795235 TCONS_00059563_6 sp|Q8NAA4|A16L2_HUMAN A16L2_HUMAN Autophagy-related protein 16-2; 0.0 920 85.79 0.965034965034965 2 coding 0 0 0 0 0.268292493520782 0.300992869814507 0.0684738550303086 0.327758309618637 GGAGAGGGCGGCCATGGAGGGGCCCGGCGTCCTCGGCGCCCCCGCCGCCCGCTGGAAGCGCCACATCGTGCGGCAGCTTCGACAGCGGGATCGAACGCAAAAGGCCCTATTCCTGGAGCTGGTGCCGGCCTATAACCGCCTCCTGGAGAAAGCTGAGCTGCTGGCCCGATTCTCAGAGGAGCTGCAGCCAGAGCCAGACGATGTCACTCTCTCTGTCCACCAGGGTCCCTGGGAGAAGGAGTCACACCAAGGCCTATCACCAGCAGCTCTGAGGGTGAAGTGGCAAGAGGAGGTGGAGGGGCTCCGGCTGGTGTGTGGAGAGATGGCCTACCAGGTGGTGGAGAAGAGCGCGACCCTGGGCACTTTGGAGTCGCAGCTGGAGGAGCGGCAGAGCAGGCTGGCAGCTCTGAAGGCCCGCGTGGAGCAGCTGGAGGAGGTTCGCGCGAAGAAGGCCGGACAGGTGCACGCGCGGCGCGCGCTGAATGAGGAGCAGCGGGCGGCTTACGAGGCGCTGCGCGCGCGCGTTGGGCACCAGGAGGCGGCTCTGCGCAGGCTCGAGGAGGAGGCGCGCGACCTGCTGGAGAGGCTGGTGCAGCACAAGGCGCGCGCCGCCGCCGAGCGCAACCTACGCAATGAGCGCAGGGAAAGGGCCAAGCAAGCGCGGGTGTCCCAGGAGCTGAAGAAGGCAGCCAAGCGGACAGTGAGCATAAGCGAGAGCCCAGACACACTAGGCGATGGGATCAGAGAGGAAGCAGAAACTCTGGTCGTGGCTGCTAAGCCAGGGTCCCTGGAGAGTGAGGCTGGTGAGAAATGGAAGCGGCCCTTCAGGTCAGCCTCTGCCACCTCCCTGACGATGTCCCGCTGTGTGGATGTAGTGAAGGGGCTTCTGGATTTCAAGAAGAGAAGAGGCCACTCAATCGGGGGAGCCCCTGAGCAGCGATACCAGAGCATCCCCGTGTATGTGACCACCCGACTTCCCACCCAAGCTCATGATGTGCTGGATGCCCACCTCTCCGAGGTCAGTGCTGTTCGTTTTGGCCCCAACAGCAGCCTCCTGGCTACCGGAGGGGCTGACCGCCTCATCCTCCTCTGGAATGTCGTGGGAGGGCACCTGAAGGCCAACCAGACTCTTGAAGGAGCTGGCGGCAGCATCACCAGTGTGGACTTTGACCCCTCGGGCTCCCAGCTACTGGCAGCTACTTACAATAAGGCCGCCCAGCTCTGGAAAGTTGGGGAGGCACAGTCCAAGGAGACACTATCTGGACACACAGACAAGGTGACGGCTGCCAAATTCAAGCTGACGAGGCACCAGGCAGTGACCGGGAGCCGGGACCGAACAGTGAAGGAGTGGGACCTCTGCCGAGCCTACTGTTCCAGGACCATCAATGTCCTTTCCTACTGTAACGACGTGGTGTGTGGGGACCATATCATCATTAGTGGTCACAATGACCAGAAGATCCGGTTCTGGGACAGCAGGGGGCCCCGCTGCACCCAGGTCATCCCTGTGCAAGGCCGGGTCACCTCCCTGAGCCTCAGCCATGACCAGCTGCATCTGCTCAGCTGTTCCCGAGATGACACACTCAAGGTCATTGACCTGCGTGTCAGCAACATCCGCCAGGTGTTCAGGGCTGATGGTTTCAAGTGCGGTTCTGACTGGACCAAAGCCGTGTTCAGGGTCCTGGGATGGAGCCCTTTACATCTGGAACGTGGACACTGGGAAACTAGAGAGTAGCCTTCGGGGACCCCACAGCGCTGCTGTCAACGCCGTGGCCTGGTGCTACTCTGGGAACCACGTGGTGAGCGTGGACCAGGCCAGGAAGGTTGTGCTCTGGCACTAGCGCCACGACTTCCTTGCCTGAGCTGAGGCTCTAGTCCGAAGCCTGAAGCCGGAGAAGTTCCCCACTGCCCCAGACACTTCAGGGCTAGCAGCGGGGTGGGGGTGGCTCAGGGTGTTTAATGGGTAAGAAGGCCTGGCAGGACCTGGCCTGTTGGTTTAAAAACAAGGTGTGGGTTGGTGTGTGTGTGGGGGGAATCACAGTATTATTTTGTTTTTTTATCTATTTCTTCACTTTCCTGGCAAAAGTGGGGGGGAAAATGCATTTAAACTGGTATGTGCTTGCTTCTCTTCAGCATTTAGGGAATGGAGAAGCCTCTGGCTGGAGGCACATGGAGACCCAGGCTTGGTTCCAGTCCCTTCCATACAGAGCCGGGGCGGAGCGGTCTGATCAGGAGACAGCAGGAAGAAAGGCCCAGAGGCAGCAAAGGGCAGTGGTTTTGGAGCCGTGGACGTTTCTCCTGTGCTCCAAGATAGTCCTGGTTCTTGGGCCCTCTCTTCAGGTGCCCAGGGTAGACTGAGGCTGAGGAGGGACCATGTGAGTTCTGAGAGACGAGCAAGAGACAGCCTGGAGGGGGCCCTGTGGAAAGAAGCCTAAAAAACCAGAGTGACGTCAGGTACTCTGAACACCAGGCCTGCCTTTAGACAGGGCCATGTTCGTGTCCCAGAGGCAGACCCTGGAGTGGGTGGGGAATACCTTCCGCGTGTGTCAGGGAGGACAGCCATGGGCTGGGCCAGGGCCTTCACTTACTTTAACAGATTTAATCCACAGGACAAGCCTCTAGAGCAGACGTAGTAGGGTGGAACCTGGGCACCCCACTTTCTTCCCCAACCGAGGGCATGGAGGAGGGTCAGAAGGACAGCCACTGCTGGTCACCGGGTGTCGAAGGGGATGCCTATCTCTGAGTGATGGGGGCTGACCTCTGGGGGTCTGCCTAATTGAGAGTCAAAGGCTTTACTCTGCAACTCTTGGCCTCCTCTGTTTATTACCTTACAGAATCCTCCCTGGGGAGTCCTGCTGCCAGTCCCAGGGTTTTGGAAAACCATTTCCAGGATGGGCAGGAGAGAGCTATGAGCCTGGACTCTGCAGCTAGACTGTCTGGGTTTGAATCTCCGCTCTATTATTTAGTAGCTGAATGATTTTGAGCAAGTTACCTTCATGTCTTTGTGCCTTAGTTTCCTCCTCTGTAAAAGGGGCTAACAGTAATATCTACCTCAAAGATTGTTGTAAGGACTCAGTGTATTAGTATTTGTAAAGTCCCTGGCACACCGCATACCCAAATCTACACTCTGCTGATCCCAGCTCAACCCTGGGCTCTGGTGACATACCCAGCTGCCTCCTAGGCATCATCTCTTCCCCTCACACCCCACATCTTCTTGGCCACAAAGTCCTGAGGCTGTTGTGTCTAACTCTCCATTCCTGCTGCCACTGCAGGCCACCTTCTCCTAGACCTGCTATCTCTCCAACCTAGACCCCTTTTTGCCACAGCCAGAGTGACTTTCTGAGGATGCATGTTGGTCACACATCCGGCCCTTTGAAGTTCTCCACTGCCTGCAGAGAAACTCCTTACCCGCAGGATGTGGCCCTGCTGGCCTCAGCTGCATCTTCACCTCCTTGCTGCTCTGCAGTGTGTCTCACACAGGGTTTTCTCTCTGCCCAGAATGTTCTTCCTGCCCAGCCTCTAATTCAAATCTGTCCTTTAGGATCCCCTCACTGAGAGCCTTTCCTCACCTGCCAGGCCGGCTAGGAGCCTCCTCCGTCTCTGTGCCTCCCTGCTTTGGGTCTGCCTCCCTCTGTCTCGGTCAGGGAGCTCTTGAAGGAGGCCAGAATGGGAGCAAAGCACTCTCCTGGGATCAGGCCTCAGAGGCACAGAGAAAGCCTCAGGAGATGTTTATTAAATGATTAAATTCTCTTACTCGAGGACTCAGCAAGTCTGATAGTCGAAGTCTCTAGCGGCCACCAGGAGTCAGCAGCTGCCTAGGTCTGCCGAAGCCATTCTCCCACCTCCTGGGGTGGAAAGACCAATGCTTCCAGCAGCCGCCATTACTGAGCTGTCAGGCCCTGTGCCTTCTATCCAGTATCTTACTTGTTCTCCCAACCACCTTGTGATGTAGCTATCTTACAGATGAGAAGATCAAGGCTCAGCGAGTGTAAGTGATAGATATGAGGTCACCAGAGCTGGCACAGCTGGACTGTGGTCTTTAAACTATTAAATATCAGACAATCGGGCTCCCAGTTAAGCAGAGCTATAGGGCATTCCCTGCCATGCTCCAGCGGCGTGCCCACGGCCTCCACCACCAGGTGGGCGATTCTAGCTCCCTGGACTTCCCTGGTGGTCCAGTGGTTAGGAATCCACCAGCCAATGAAAGGGTCACAGGTTCGATCACTGCTCCACATGCTGCAGGGCAACTAAGCCCACGTGCCACATCTACTGAGCCTGTTCTCCAGAGCCTGCAAGCTGAAACTCCTGAAGCCTGCCTGCCTAGAGCCCGTGTTCCGCAACAAGAGAAATCACTGCAAGGAGACACCTGTCCACTGCAACTAGAGAGTAGCCCCCTCTCACTGCAACGAGAGCAAGCCTACATGTAGCAACGAAGATCCAGCACAGTCAAAAAAAAACAAAAACAAAACAAAATTACTGAAATCCCTCCCTGCATCTTCTCTTCTTCATTCTGGCTCTGGGAGCCTATGTCTGAGCCTGGAGGATTAGTATCCTTTGAACTGAGGGACATGCAGGGCTACAGGAGGGACATGAACTTGATCCTGGAAGGCTGTTACCAGTTCCACCATCTGGGGCAAGCACCTCCTGGGACTGCAGTGGAGACGGCTTAGAGGACACAGAAGCGGTCATCAGGAAATGCCCTGACTCAACTCCTGGCAGAGTGCCCTCCATTCCCCTCAAGCCTCCCTTTCTTCATGGGGCAGCACACGCTTGCCTCACCTCAGGGAGCACGTGCACACCTTAATTTACTTGGAAGGAATACTTCCTGAAGGAGCAAGTCTGGAGGGTCAGAAATGGGCCTAGGCATTCCAGGGGATGAGGCAAGTGTGAGGAGAAGGGTTGGTAATGCCATGCAGGGGAAGAGCTCGGAGGGGTGCCAGCTGGGCAGGCTGCACCTCTAGTCCTTGCGGTCCTGGGCAGGGCCAGAACCCTGTACGGAAGACTGCTCTGGGTTTCCGTTCTCCAGTCACTACTCAGGTGTTCAGTCGCTACTCAGCCTACTCTGAGGTTGCTGGCCTGAGTTTGTTCCCTAAAGTCCAAACTGTCACCTTTGGGACTTCCCTGGTGGTCCAGTCGTCTTTGCAAGGTAGGAGGCACAGGTTTGATCCTTGGTCAGGGAACTAAGATTCCACATGCTGCAGAGCAACTGAGCCCGTATGACGCAACTACTGAGCCCGTGTGCTCTGGAGTCAACCACACAAAGGAGTCTGAGCCACAGCAAAAGACCCCGCGTGATGCTACAGAGGTCCTGAGTGCCGCAACCGAGACCCGATGCAGCCAAATAAATAAATATAAAAAAAAAAAAAAACCCTTCA EMBV3_19718 TTACTGCATTTACTTCGACCGCAAGAGACGGAGTGACCCCAACTTCAAGAACAGGCTGCG Gene GeneID:512673|LOC512673:XM_002686903:105_cdna Constitutive 0 NULL GeneID:512673 4 GENE LOC512673 NULL similar to Mitochondrial import receptor subunit TOM20 homolog (Mitochondrial 20 kDa outer membrane protein) (Outer mitochondrial membrane receptor Tom20) EMBV3_41205 CACTCAAATTGTGATGCAGAGTAGCCCAGCAGAGGGTGATAGTCCTGGTGTTAGCACATC Gene BVV0101_011549 + 0 NULL GK000023.2:20732785-20745535 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32066 TCGGTGGATGTATGGAGGGACAAGTGACCGGATGCATGTTGTAGGCTCTTCTGGAGAACT Gene GeneID:510681|BSPRY:XM_002689938:95_cdna UTR3_Alt 2 NULL GeneID:510681 8 GENE BSPRY NULL B-box and SPRY domain containing EMBV3_22579 TGGAAGGTCATCTGAGCCTAGGAAGAAAGCGTACTATCTGTTTTCCCTCATCATGAATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22032 TCGACGACTATGGGCTACTGACGAAACACATGGACAACGCACTCTGCGGGAAGATCTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02076 TATCAGAGCAGTTCGTGAGCCCTTCGTATCCCGCACAGAGACGACATTCTCTTGGCTTTC Gene GeneID:789453|LOC789453:XM_002691217:55_cdna Constitutive 0 NULL GeneID:789453 11 GENE LOC789453 NULL hypothetical LOC789453 EMBV3_27900 TTTCCAACCCACACAGGTACTTCCCTGCAAGTGAATGCAACATCTCCCACAAGAGGCAAG Gene BVT0102_252008 + 0 NULL GK000029.2:33256129-33546269 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163583 TCONS_00163581 TCONS_00163582 1 XLOC_099943 NonCoding TCONS_00163582 XLOC_099943 NonCoding NonCoding - 29:33542471-33544383 - TSS122563 1242 1 TCONS_00163582_2 66 0.226247987117552 2 0.35112506541078 0.000153346390938003 4.04388889890844e-05 9.68487573318912e-05 0 7.5522233645103e-05 0 0 0.000242265223037236 2.67414774600003e-05 0 0 0 0 0 0 0 0 0 0.000747409340602592 1.4045481393096e-09 0.000438827612305793 0 0 0 0.000100403605886088 0.000102098572541856 0.000174539533205574 0 0 0 XM_002688782.3 ZNF627 PREDICTED: Bos taurus zinc finger protein 627 (ZNF627), mRNA. 2e-10 71.6 91.84 0.0386473429951691 NM_016557.3 ACKR4 Homo sapiens atypical chemokine receptor 4 (ACKR4), transcript 4e-07 60.8 80.88 0.0539452495974235 0 noncoding 1 1 0 0 -0.713233903784375 0.156701737045711 -0.0727956040788137 0.538010024029426 GGGCATGGTGACAGAGGGACCAGCAGTAATACATCCGGAGAGGACAGGAAGTCAGAAGCCAGTCCCTCCAGACCAGGACACACGCCCCAGGGAAGCTGGATGGCATCGAAAGCCCCAGACCCGGGGAACAAAGTAGTCCCTGGTGGTTCCTAGAGCTGTTCCCTCCTGGGGGGTCCCGCCCGAGGTCCCATTCCTCCTATTTCCAGGCCCTCAAAGGCTTTCCAACCCACACAGGTACTTCCCTGCAAGTGAATGCAACATCTCCCACAAGAGGCAAGTGCCACAGGGCCCCTGGGATGTTCAGCCCCCAGAGCTGGAAAAGAAAACCAAACTGAGTCTGTTAAGTTCTCAGAGGGCATGTGGCCACCAGCCCACACTTTAAATGCTCACCCATGGCAAGGGGCTATGATGAATAAAACTGCTGTATCCATTTGTGTGCAGACTTTTGTATGAACATCAGTTTCCTTTGCTCTGGGACAAGTGGCCAAGAGCACAAAATCTTGTTGTGTGTTGTCGCATGGGGAGAAACTAGCTGTTTTCCAGAGTTGGGCTGGACCAGAAATTCCTTATAGGAAAGTTTTCTTTCTAAAGTTTTGTTTTTAGACTTAGTGGGGGTACTGTGGACCACTCTGTATTACCTGTGAAACTTCCTGTGAATCTATCATTATTCCAACAATAAATTGGAGAACACGACTCTATTTCTAAAATGATGATCCTCAAATCAGTATGGCATTTGGAATCTACTGGGTATGCCAGAAAGTGATGTAAGTTTTAAAAGTGTTGATATTTACACCAGCATAGCAGACAGATTCTTTACTGTTTGAGCCACCAGGGAAGCCCATACACCAGAAATCATATACCTAATAACTATACATACTTAATGATTTTTACTTAAGGCCTCCTGAATTCTTTCAGTGAACATGTCAGGTAAAACATCAGCTGGTGTAACTGCATTCGTGACCACAGGGTGTGAAGGGGATGCTTGTGTGGTCACGGATAATCTGCAGTGCATGTCACTCAGCAGTCCTGTCTGAGGTCTGGCTTTCAGACTCTCGAACCATGAGCATCAGGGAGTCTGCTCTGCTACCCGACTGAAGGTTAGTGAAGACAGAGTCAGTCAGGGTGACGTCAAGATTTCCCCTTTACCAAATGTAGCATTTTTTATCTCGGGAGATTCCTACAACTGAATATGACACGAGGGCCCTGTCTTTGTTTTTCATTTTCATCCCACTGTTTTTCATT TCONS_00165005 TCONS_00165006 TCONS_00165007 TCONS_00165008 TCONS_00165009 r 3' 1887 TCONS_00165005 TCONS_00165006 TCONS_00165007 TCONS_00165008 TCONS_00165009 r 3' 3798 EMBV3_16331 CCCATGTATACTGACTGTCCCCAAAGTATCTTCCCTGTCTGCAAAATGACACTTTCCTCC Gene GeneID:100125592|RUSC1:NM_001105041:5_cdna Constitutive 0 NULL GeneID:100125592 3 GENE RUSC1 MGC148826 RUN and SH3 domain containing 1 EMBV3_34123 CACCTCGAATCCAGGCACTCCACTTACCCACTGACCCTGGTACCTGCTCCATACTTTCGT Gene BVV0102_221627 + 0 NULL GK000025.2:2584416-2633097 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27783 GAAACATAAAGACAATACTCTCAGAAGTGTGGCAGGGACTGGGTCACTGGCTGGTGGTGG Gene BVT0102_169408 + 0 NULL GK000013.2:60845764-60918352 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27586 GAGGTCCTGAGAGGTGGAGAGGTTTGCTCAGAGGCAGCAAGTGAGATGTATGAGTGTCAA Gene GeneID:281401|PIGR:NM_174143:10_cdna UTR3_Alt 2 NULL GeneID:281401 16 GENE PIGR NULL polymeric immunoglobulin receptor EMBV3_06685 CAGTAGGTGTTTCCTCATATTGCCTTTTGTGAGCTTATTATGAACACACAGTTTCTATTG Gene GeneID:514000|ARMC1:NM_001015594:22_cdna Constitutive 2 NULL GeneID:514000 14 GENE ARMC1 NULL armadillo repeat containing 1 EMBV3_05719 TTCCAGGAACTTGGTTATGGTTGTCTCAAGGTATACCGGACACTACTTCATAACCACTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39724 GGACCTTCTGGGCGATTCTGGGAGGCACCGGCCAAATACATAAGACTTTCGATGAGGAAT Gene GeneID:784924|LOC784924:XR_084725:43_cdna Constitutive 0 NULL GeneID:784924 4 PSEUDO LOC784924 NULL similar to Brorin precursor (Brain-specific chordin-like protein) (von Willebrand factor C domain-containing protein 2) EMBV3_23298 CCGGCGCCTCTACGTGGGCAACATCCCCTTGACGGCATCATCTTCCAGGGCCAGTCGCTG Variant GeneID:507895|U2AF2:NM_001075336:148_cdna 519^687 1 EMBV3_28240 GeneID:507895 18 GENE U2AF2 NULL U2 small nuclear RNA auxiliary factor 2 EMBV3_40295 CAAAACTTTACCTTGAAATCTGTGGTTGACCCAAAGGACCTCGACACCACCCCAGTTGTC Gene GeneID:540627|LOC540627:XM_002698393:299_cdna Constitutive 0 NULL GeneID:540627 26 GENE LOC540627 NULL similar to Cytochrome P450, family 2, subfamily C, polypeptide 87 EMBV3_13355 AGCAGGCTTCTTTGCTAACTAAAACTTCTTGGGGGTCTGGACGGTCAACATCTGCCTGAG Gene BVT0102_207455 + 1 EMBV3_37793 GK000030.2:46621703-47028834 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00129783 TCONS_00231338 TCONS_00249539 TCONS_00066283 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00209830 TCONS_00037672 TCONS_00020157 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00177370 TCONS_00175855 TCONS_00218945 TCONS_00169198 TCONS_00250930 TCONS_00166977 TCONS_00008224 TCONS_00021569 TCONS_00137878 TCONS_00107179 TCONS_00239419 TCONS_00157439 TCONS_00189806 TCONS_00038458 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00062744 TCONS_00048820 TCONS_00109027 TCONS_00155780 TCONS_00124585 TCONS_00000305 TCONS_00251707 TCONS_00130084 TCONS_00039226 TCONS_00178325 TCONS_00161667 TCONS_00167260 TCONS_00010054 TCONS_00040836 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00110323 TCONS_00156838 TCONS_00130290 TCONS_00063486 TCONS_00207365 TCONS_00057310 TCONS_00020756 TCONS_00249772 TCONS_00010471 TCONS_00224483 TCONS_00088088 TCONS_00021595 TCONS_00157613 TCONS_00199424 TCONS_00155778 TCONS_00080066 TCONS_00059708 TCONS_00161835 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00249569 TCONS_00116665 TCONS_00223554 TCONS_00070810 TCONS_00222114 TCONS_00107832 TCONS_00199037 TCONS_00110403 TCONS_00019199 TCONS_00122479 TCONS_00122686 TCONS_00157036 TCONS_00180345 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00218178 TCONS_00252353 TCONS_00224113 TCONS_00197928 TCONS_00152736 TCONS_00242131 TCONS_00116100 TCONS_00250720 TCONS_00169197 TCONS_00124846 TCONS_00010366 TCONS_00038381 TCONS_00152744 TCONS_00222766 TCONS_00242885 TCONS_00209846 TCONS_00023373 TCONS_00252810 TCONS_00207069 TCONS_00175546 TCONS_00065476 TCONS_00209711 TCONS_00009884 TCONS_00013635 TCONS_00252107 TCONS_00040883 TCONS_00148280 TCONS_00056146 TCONS_00249011 TCONS_00123620 TCONS_00176735 TCONS_00248864 TCONS_00224475 TCONS_00031939 TCONS_00039951 TCONS_00169199 TCONS_00131137 TCONS_00155779 TCONS_00063181 TCONS_00009259 TCONS_00234065 TCONS_00111497 TCONS_00224484 TCONS_00020017 TCONS_00209636 TCONS_00007431 TCONS_00222455 TCONS_00245928 TCONS_00233372 TCONS_00218896 TCONS_00153218 TCONS_00240534 TCONS_00085967 TCONS_00063080 TCONS_00199802 TCONS_00207755 TCONS_00197601 TCONS_00250246 TCONS_00238327 TCONS_00040179 TCONS_00040740 TCONS_00200529 TCONS_00064619 TCONS_00135546 TCONS_00115148 TCONS_00250726 TCONS_00122313 TCONS_00020023 TCONS_00251907 TCONS_00218898 TCONS_00218552 TCONS_00166449 TCONS_00031910 TCONS_00251929 155 XLOC_107421 XLOC_069855 XLOC_078496 XLOC_140827 XLOC_152482 XLOC_040997 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_128341 XLOC_021501 XLOC_010835 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_107144 XLOC_105634 XLOC_132264 XLOC_103305 XLOC_153873 XLOC_101813 XLOC_003782 XLOC_012242 XLOC_084087 XLOC_063090 XLOC_146085 XLOC_095894 XLOC_115843 XLOC_022282 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_037471 XLOC_028951 XLOC_064932 XLOC_094822 XLOC_076129 XLOC_000084 XLOC_154648 XLOC_078795 XLOC_023044 XLOC_108098 XLOC_098554 XLOC_102096 XLOC_005606 XLOC_024650 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_066227 XLOC_095298 XLOC_079001 XLOC_038213 XLOC_125882 XLOC_035109 XLOC_011431 XLOC_152715 XLOC_006022 XLOC_137538 XLOC_052875 XLOC_012268 XLOC_096068 XLOC_121077 XLOC_048950 XLOC_036490 XLOC_098720 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_152512 XLOC_070831 XLOC_136854 XLOC_042587 XLOC_135423 XLOC_063742 XLOC_120690 XLOC_066307 XLOC_009879 XLOC_074034 XLOC_074241 XLOC_095496 XLOC_110113 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_131641 XLOC_155294 XLOC_137409 XLOC_119588 XLOC_092501 XLOC_148795 XLOC_070269 XLOC_153663 XLOC_076389 XLOC_005917 XLOC_022206 XLOC_092509 XLOC_136073 XLOC_149548 XLOC_128357 XLOC_014040 XLOC_155751 XLOC_125588 XLOC_105327 XLOC_040195 XLOC_128222 XLOC_005437 XLOC_008165 XLOC_155048 XLOC_024697 XLOC_090162 XLOC_033949 XLOC_151954 XLOC_075172 XLOC_106509 XLOC_151807 XLOC_018184 XLOC_023768 XLOC_079842 XLOC_037908 XLOC_004815 XLOC_143544 XLOC_067397 XLOC_010695 XLOC_128147 XLOC_002992 XLOC_135764 XLOC_150855 XLOC_142854 XLOC_132215 XLOC_092983 XLOC_147198 XLOC_052005 XLOC_037807 XLOC_121454 XLOC_126270 XLOC_119262 XLOC_153189 XLOC_144994 XLOC_023996 XLOC_024554 XLOC_122181 XLOC_039343 XLOC_081769 XLOC_069449 XLOC_153669 XLOC_073868 XLOC_010701 XLOC_154848 XLOC_132217 XLOC_131872 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_00201 TCTTCTAACCTCTAGGGTCAAATACCACCCGCACCCCCATCATCAGCCCAGAATGGTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25220 CACTACCAGTGCCCAGGTGGCCGGTCTGTACAAGAAGCAGAGTCAGATTCAGAACCAGCA Gene GeneID:100124507|LIG1:NM_001102548:2_cdna Constitutive 0 NULL GeneID:100124507 18 GENE LIG1 MGC139151 ligase I, DNA, ATP-dependent EMBV3_17631 CTTAGCTCAGAAATTCCCAGAAGGACTGATTACAGGTTCCCTGCCAGCATCTTGCCAGCA Gene GeneID:506914|TSGA14:XM_002686942:69_cdna Constitutive 0 NULL GeneID:506914 4 GENE TSGA14 NULL testis specific, 14 EMBV3_12469 GAGGATCTTGCCCAAGGACCCACAGCAACCAAGACCTTTAACAGCAGAGTGGTTTGTCCA Gene GeneID:527889|CSNK1G1:NM_001038146:79_cdna Constitutive 0 NULL GeneID:527889 10 GENE CSNK1G1 MGC134312 casein kinase 1, gamma 1 EMBV3_07470 CGAGCCATGGTAGGGGAATCTGGCCTCGAGACGTGTTGAAGAAGGTCTCTCGAGGTCTTT Gene BVV0102_223338 + 0 NULL GK000019.2:61927818-61950789 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063808 TCONS_00162571 TCONS_00054133 TCONS_00142473 TCONS_00162568 TCONS_00010832 TCONS_00231771 TCONS_00218950 TCONS_00131534 TCONS_00186556 TCONS_00117596 TCONS_00240372 TCONS_00167122 TCONS_00210949 TCONS_00255144 TCONS_00231774 TCONS_00063807 TCONS_00186493 TCONS_00186490 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00149043 TCONS_00033204 TCONS_00131535 TCONS_00149042 TCONS_00231768 TCONS_00186557 TCONS_00217532 TCONS_00158314 TCONS_00230833 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00230828 TCONS_00178734 37 XLOC_038534 XLOC_099452 XLOC_031942 XLOC_086898 XLOC_099449 XLOC_006383 XLOC_141259 XLOC_132269 XLOC_080239 XLOC_112608 XLOC_071762 XLOC_147036 XLOC_101958 XLOC_129459 XLOC_158076 XLOC_141262 XLOC_038533 XLOC_112545 XLOC_112542 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_090920 XLOC_019438 XLOC_080240 XLOC_090919 XLOC_141256 XLOC_112609 XLOC_131531 XLOC_096768 XLOC_140323 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_140318 XLOC_108507 NonCoding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_20235 GAGCAGCAACCATCCAGGAAATGGAATGGAATTCTCCTAGTGTCTTCTACAAACTTGAGC Gene BVT0101_014255 - 0 NULL GK000029.2:32861455-32873780 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164984 TCONS_00164980 TCONS_00164978 TCONS_00164982 TCONS_00164981 TCONS_00164979 TCONS_00164983 1 XLOC_100376 Coding TCONS_00164980 XLOC_100376 Coding Coding ARHGAP32 29:32869962-33002745 j TSS123324 10575 1 TCONS_00164980_10 2023 22 0.920523866186682 2.13131405304272e-19 0.000164551136738592 4.71132175165167e-16 0.000704157692228017 0.000496459498924873 0.000288005840660037 0.000370678623067165 0.000229471115021639 0.000453496127174035 0.000399684978708335 2.79794220910806e-05 5.31023222123865e-09 1.25481477127642e-45 6.98879012469938e-43 4.60855923575651e-10 0.000509825412613549 2.0125926177068e-05 2.02749037374635e-09 0.000278710260676978 0.000599201451627853 0.000115049367326684 3.67417708187117e-10 0.000266319781865248 8.29857748674533e-05 0.00115768211003526 0.000937616585311643 0.000360036047032878 2.35110009307262e-05 1.48904907835354e-05 8.26170131161426e-05 NM_001192087.1 ARHGAP32 Bos taurus Rho GTPase activating protein 32 (ARHGAP32), mRNA. 0.0 1.201e+04 99.09 0.637163120567376 NM_001142685.1 ARHGAP32 Homo sapiens Rho GTPase activating protein 32 (ARHGAP32), 0.0 8482 79.02 0.92661938534279 TCONS_00164980_10 sp|A7KAX9|RHG32_HUMAN RHG32_HUMAN Rho GTPase-activating protein 32; 0.0 3276 82.02 0.999505684626792 0 coding 0 0 0 0 -0.144495732125479 0.357463052179687 -0.144495732125479 0.357463052179687 AGTCCAGCGGGTCTCCAGAGGAAGATGAAGTCCTCAGTACATTCTGAAGAGGATGATTTTGTTCCAGAACTACACAGAAACGTTCACCCTCGAGAGCGGCCTGACTGGGAGGAAACACTTAGTGCAATGGCCAGAGGAGCAGATGTTCCAGAAATTCCTGGAGACCTTAGTCTTAAGACATGTGGCAGTACAGCCAGTATGAAGGTTAAACATGTGAAAAAGTTGCCCTTCACTAAAGGTCACTTTCCGAAGATGGCTGAATGCGCACATTTCCATTATGAGAACGTTGAGTTTGGCAGCATACAGCTTTCACTTTCAGAAGAACAGAATGAAGTAACAAAAAATGGCTGTGAATCTAAAGAGCTGGTCTACCTCGTGCACATTGCTTGTCAGGGCAAAAGTTGGATTGTTAAAAGAAGTTATGAAGATTTTCGGGTACTTGATAAACATCTTCATCTGTGTATTTATGACCGACGATTCTCCCAGCTCTCAGAGCTTCCCCGTTCTGATGCTCTTAAGGACAGTCCAGAGTCGGTCACTCAGATGCTTATGGCTTACCTGTCCCGCCTTTCAGCTATTGCTGGGAACAAGATCAACTGTGGACCTGCCCTTACTTGGATGGAGATTGATAACAAGGGAAATCACCTTCTAGTTCATGAAGAATCCTCGATTAACACTCCTGCTGTTGGTGCTGCCCATGTTATCAAGAGGTACACCGCTCGGGCCCCAGATGAATTGACCTTAGAGGTGGGAGACATTGTTTCTGTTATTGACATGCCCCCAAAAGTGTTAAGCACATGGTGGAGAGGCAAGCATGGATTTCAGGTGGGACTCTTCCCTGGACACTGTGTTGAGTTAATTAATCAGAAAGTTCCCCAGTCAGTGACCAACTCAGTGCCAAAACCAGTATCTAAAAAGCACGGCAAGCTCATTACTTTTTTACGCACATTCATGAAGTCTCGTCCAACAAAACAGAAATTGAAGCAGCGTGGGATCTTGAAAGAAAGAGTGTTTGGCTGTGACCTAGGGGAGCACCTTCTGAATTCTGGTTTTGAAGTGCCCCAGGTTCTTCAAAGCTGCACAGCGTTCATCGAGAGATATGGCATCGTGGATGGGATATATCGTCTCTCTGGTGTCGCCTCCAATATCCAGAGACTACGCCATGAATTTGACTCTGAACATGTTCCCGACCTGACAAAAGAACCCTACGTCCAAGACATCCATTCCGTGGGCTCCCTGTGTAAGCTGTACTTCCGAGAGCTCCCAAACCCTCTGCTCACCTACCAGCTGTATGAGAAATTTTCTGATGCTGTTTCAGCAGCAACAGATGAAGAAAGGCTGATAAAAATTCACGATGTCATCCAGCAACTCCCTCCTCCACACTACAGAACACTGGAGTTCCTAATGAGACACTTGTCTCTTTTAGCTGACTATTGCTCCATCACAAATATGCATGCAAAAAACCTAGCCATCGTTTGGGCTCCAAACCTGCTAAGATCAAAGCAGATAGAATCTGCCTGCTTCAGCGGGACGGCAGCTTTCATGGAAGTGAGGATTCAGTCCGTGGTCGTGGAGTTCATCCTCAACCACGTCGACGTGCTCTTCAGTGGGAAGATCAATGCAGTCATTCAGGAAGGGGCAGCTTCTCTATCAAGACCCAAGTCCCTGCTGGTCTCGTCTCCATCTACCAAGCTGCTGACACTGGAGGAAGCCCAGGCACGAACACAGGCTCAGGTCACTTCTCCAATTGTGACTGAAAATAAATACATTGAAGTAGGAGAAGGACCTGCTGCACTCCAGGGGAAATTTCATACCATAATCGAGTTCCCACTTGAAAGGAGGAGGCCTCAAAATAAAATGAAAAAATCTCCCGTGGGGAGCTGGCGTTCCTTTTTCAACTTGGGGAAATCGTCCTCTGTTTCTAAACGGAAGTTGCAGCGTAATGAGAGTGAGCCCTCCGAGATGAAAGCCATGGCTCTGAAAGGTGCAGCTTCTCTTGACTCCAAGCTGTTCCGACCCAGAAGACCCAGATCTAGCAGTGATGCCCTGAGCGCCTCGTTTAATGGCGAGATGCTGGGGAACCGCTGCAACTCCTATGACAACCTGCCCCACGACAACGGAAGCGAGGAGGAAGTCGGGCTGTTGCACATTCCGGCTCTCGTGTCTCCGCACTCGGCTGAGGACGTTGACTTGAGCCCACCAGACATCGGAGTAGCCAGCCTGGATTTTGATCCGATGTCATTTCAGTGCAGTCCTCCTAAGCCTGAATCAGAATGTCTGGAGAGCGGGGCTTCCTTCTTAGACTCCTTGGGCTACTCCAAGGATAAACAGAGTACCGATAAGAAGGATATGGAAACAGGCGGTAGCCAGTCACAGACTCCAGGAAGCACTGCAAGTTCTGAACCTGTGTCTCCTCTTCAGGAGAAGCTGAGTCCATTCTTCACCCTGGACTTGAGCCCCACTGAAGAGAAAGCATCGAAGCCATCCTCGTTCACCGAAAAGGTTGTCTATGCTTTCTCTCCAAAGATCGGACGGAAGATAAGCAAATCACCCTCTCTGAACATATCCGAGCCCATTTCAGTGACCCTTCCCGCCCGGGTGTCAGAAGTCATCAGCCCCGTCGCAACCACGGCAGCTCAGAACGCACCTTCTGCAGCCTGGAACAAAAGTAGCGAAGAAAGTGATGTCATGAATAGATCCCCCACCCAGGTAGTAAAGAGAAAAGCAAACGAGAGAGAGGCCCAGGAAGGGTGTGAGTGTGAAGCCCAGCCCCCGGACCAGGGGGCTGCCGCAGACGTAGGCTCACCAGGGAAGGAGGAGCCTGCCTCAAGCAGTCAGAGTAAGGCTGTGCCTTCTGGACAGACTCAGACAGGAGCAGACACACATGACCCCCCTCAGGATTCCGTTCCTGTAAGCTCAGTCTCTCTTATCCCACCGCCACCGCCTCCGAAAAACGCGGCACGCCTGCTGGCACTGGCGTTGGCAGAGTCTGCACAGCAGGCCTCCACCCAGCCACTGAAGAGACCAGGCACATCCCCGGCTGCCTGTGCACACTGTGGGGACGCGGCGGTGGCTGCAGCCGAGGACAGACCGCCTGCTCCCTACTCTAGCGTTACTCTCGAGAAAGCCTATTTCCAAACCGACAGGCCAGCAGAGCAGCCCCACCTCCAGAACAAGGGCCCTGGGCATGGTGACCAGCCAGTGCCAGACACAGCAGCTGCCGGGGACTATACCCATTCCAGCACCACTGACTCCACAGGGCAGTCCCCCCCAGCAGACTTACCAGGCGATCAGCCACATCGAATCTATTTATCTGGGGACCCAGAGAAGGCCAGAGTCACTTCCGTTCCCTTGACAGACTCAAAGTCTGATGATCTCATCACTTTCCCTGAAGACCAGTCTGTGAAGACCAGTGTGCCGACCGTCTCCTTTGTGGACCACGATCAGCTCCATTTCTACAGTGGAGATGAGCCTCCTTCTTACCTTGGTGCAAGCATGGATAAGCCCCATCACCCTTCAGAACTTCCAGACAGAAGTCCTGCCCCTTCTCATTTGCCTAGGGACAAAATCTGCCCTCCTTCCGAGTCCCCTGAAGAGAACACCAGCACAGCCCCCCTGGCATACATGACGCATGCTCCAGCAGCGGCCATAGCAAGTGCCAGCGAAGCCAGCTGGGACGTGGCGGAACAGCCCAGCGCAGTGGAGTATGTAACCGCCACCCTTCAGCGTGCTCAACGAGCCAGCCGTCCCCTACCCCTACCTCCTTCCCAGAGACCTGCAGAGCAGCCCCCAGTCCTGGGGCAGGTACAGACCACAGCCAGTATAGGACTAACCAATCCCCATAAGGTTCAAGGAGCAGTTCCGGCTCCGGAGAGGCCGCCTGACCTGGGTGACCCTGCACCTGTCCTGGTTGGGGATGGCGGGGCCGCTGCACAGTGCCCAGCCTCCGCTCCAGCTCCCCAGCCCGTCCTTCCTGAAAAGGTGCGGGAAGGCGCCAGGGCACCCGCGCTGCACCTGCGCGCCGAGTCTGTGCCCGCGCACGCTTCCTGTGGCTTCCCCACCCCGGCGCCCCCCGCCAGGACCATGGAGAGCAGACTGGCCGCGGCCCTCCACTCGGGCAGCGCCGACGGGGCGGGCAGCGCCGGGTACCACTCCTTCGTTGCCGCTGCCTCCGCGGAAGAGGCCTTGCCTTTGCCCCTCCCTGTCCCACAAGCCAAGCACGGCCCTCTTAAGACTGCTTACCCCACGTTCGCCAGGCCCGACCTCACCACGGAGCCCTTCGGTCCAGAAAGCTGTCTGCATTTCAGTATGACCCCAAACTGCCAGTTCCGCCCCCAGAGCGTGCCACCCCATCACGGGAAAGCAGAGCCACACCCAGTGTATGCATCCAGGTCGGAGCCACCAGCCTCCACAGGCCCCCGGTACAACACGTACGTGGCCCCGGGGAGAAGCGTGTCTGGACACCACCCGAAGCTGTGTAGCCGGGCAGAGTATGTGTCCTCACTGAGCTCGTCCGTCAGGGGTGGCTGCTACCCCGAGGACATGCCGCCGTACCCCACCATCCGCCGGGTGCAGTCTCTGCACGTGCCTCCGTCCTCCATGATCCGCTCTGTCCCCATCTCTAGGACAGAGGTGCCCCCAGATGAGGAGCCCGCCTACTGCCCACGACCCCTGTACCAGTATAAGCCATATCAGTCATCCCAGGCCCGCTCGGACTACCACGTCACTCAGCTGCAGCCTTACTTCGAGAATGGCCGGGTGCACTACCGGTACAGCCCCTACGCCAGCTCGGCCGGTTCCTACTACAGCCCCGACGGCGCTCTGTGCGACGTGGACGCCTACGGCACGGTGCAGCTGCGGCCCCTGCACCGCCTGCCCGGCCGCGACCTGGCCTTCCTCGCCCCGCGGCTGCAGGGCAAGAATGTGTACACGTTCGCCGGGGGTGCGGCCTCGCGCCCCCGGCCCAGCGTGGCCAGCTACTTCCCGGCCAATGACCACAACGTGGTCCACATGCCCCCGGTGGCCGACGCGAAGCACGCATATGCCTCGTGGGACCTGGAGGACCTGGAGAAATACCGCCTGCAGTCCATCCGCAGGGAGAGCCGTGCGCGGCAGAAGGCCAAGGGGCCCGTCGTGTCCCAGTACGACAACATGAGCCCGGCCGGCGCACCGGACGACCTGGGCGGCATCTATGTCATCCACTTGCGCAGCAAGTCGGATCCTGGGAAAACTGGACTCCTCTCGGTGGCCGAGGGCAAGGAGGGGCGGCACCCAGCCAAGGCCCTGAGCCCCGAGGGGGAGGACCGCTTCTACCGGAAGCACGCAGAGCCAGAGCTGGAGCGCGCACCCCACCACCAGGGCGGGTACGGCAATGGGCAGCCGGAGAAGCCGTGCCTCCCCCAGAAGCAGAGCAGCATCAGGAACCGAAAGCTGCACGACGCGGGCTGCAGCCTCCCCGAGCATAGGCCGCATCAGGAAGCAAGCCATAGGCAGCTGTGTGACCCGAAGAACGGGCCCCCTTTCCCCCAGGGAGCTGGCCCGCTAGACTATGGGCCCAAAGGGCTTCCAGACCCTGCCGAGCCTGTCAGCTACCTTAACTCTGGAGGGAAATACGTGCCGTCAGGGCCGGAGTCTTTAAGACCGAGCCACAAAGAGGTGCGGCTCCCCAAGGAGCTGGAGCGGCCCCGGGCCCGGCAGCCTCCGGCTGCGGAGAAGCACCCCAGAGACTGCTACAAGGAGGAGGAGCACCTGTCGCAGTCCGCGCTCCCGCCCCCTAAGCCAGAGAGGAGTCACAGCCTCAAACTGCACCACCCTCAGAGCGCGGACAGGGACCCCGGCGTGCTGTACCACTACCACACCCACGGCAAGCGCCCGGGCCGGGGGACTGCTGGGCCGCAGTACGATAACCTGGAGGGCTACCACTCCCCGCCCCAGCACCAGCGAGGGGGCTTCGGAGCAGCAGCAATGGGCCCGTACATGCCCCCCGGCTTCCCCCATCCCCAGAGCAGGACATACGCCACAGCTCTGGGGCAGGGCGCCTTCCTGCCCACAGAGCTGGCCTTGCAGCCTCCTGAAACGCAGGTCCATGCAGAATGAGCCCCGGGAGCAATAGAGTTGACGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTTTTCAGTAACCAAAAAAAAAAAAAAAAAGCTACAAACCGCCCCCCCAACCACCACATTAAAAAAATAAGAAGAAGAAAAATCACCATCTTTTTCCCTCTTCCCAGCTTCATCACCACCTCTTCCACCTACAGACTGTTGTCATTTTTGTCATTTAAAGATTTGAACGATTGTGAAGCACTGTGTTGAAAATCTAGTAATTTGTTACAGACCGTACTTGCCACATAGGGCTGATTTGTAAGAGCCTGAGGACTGCCTTTAATGGAATTTGAGTTTGACCTCGTCCTTCCTAGCGTTTGCTGCGTCCTTCAGAGCAGCTGACACTCACTTCTTGAAGGTCTTATGTGCCCTCTCCTGTCCTGTCCCCACTTGCTTTCCCAGTAGCCACGGCCTTGCCCAGAGGGTCACCTGTTTTCTTTGTCAGGTCATACCCCCTGTCTTAGAAGGGGCTGTGTATTAAATTAGAGTGGGGAGAAACTTCTCCCTGAGCCTTCACATAAGACTATTATTGGATATTTAACAAATTATAACCCCCAAAAAGGAATAAGCATTTAATAGTCATTACAAAATGTCAGACCCATTAGATCCAGGCTGAACCATGCTCTTCTCCTGGTTGCTCCACACACTTCAGTGAACAGGCTTATCCCACTGCAGAGGGGTTTTGAAGTTACAATTAAAGAAACTTCTTAGGTGGAAGTCTGTGACCTTCGTTAGCACCAGAAAACTACATCAGTGGTTCTAAGCTGCTGCCTGTCTTCAGTTCTTTTTTTTTCTCAATAGTATTTGATAAATTGTGATCCTAGTGAAGCATTTCACACTATTTGTTTTCCTAAAGCAGTTTTTTTTCCCCCTCATTTAAAAAACAATGAAAAACCAGCATGGTTTGCCTGGATAAACACACATAATGTCACATGATTGTAAATTTGCATATTAATTAGTTTCTAAACCAGGTGTCCTGGGAATTCTTACAGTAGCTACAGGTTATTATTATCCGTTAGTAAACTGAGTGTTCCTGCAATAACACTTAGCACAGCCCATTTGACCTGCTGGAATTCTGGGCAGCAACCCTTAAGGTCCCAAGGAATTACCGTGTTGTGTCTTCCCTCTGTCCCTGGGTGATTGCAGTCTGAACTGTAATTGCCATCCACACCAGCATTTCAGGTTTAGTCTTCACAACACTGCAGACATGTTAAACATGTTCCATACCCAGGACTTTCTTTTGAAAGTTTGCATTCCATTCTCTCAACCCACCCCACCACGAACGCCAGACCAGAAGGCAGTCCTGTATTTATAAAACGAGTTGAGATAATCATGTCATTCCATAACTCTTAATAATACTTGATTTTTATACATTCACATGTTTTAAATGCTCAAGTTTGTAGAAGACACTAGGAGAATTCCATTCCATTTCCTGGATGGTTGCTGCTCTGGCTTTTTAAAACTTGGAACTAACGTTTATTTAGAGCAAAGAAAAATCTTTTAAGAGGCTAAATTGATGCTGCTATTATTGCTGTGAAATTGTATAAAGATTAGGATTCATGCCAGTTTTTTTAAATCTAAAAAATCATGTGATTGCATTTTAAGGGTTTATATTTAGAAAAAGAAAATAAAGTTTTAAGAGCAACACATTTACTTATTAATATATGTGGAAATACTCTGTTAGGTGTTCTTTTGTTCCCCCGGAATTGATCGAAGAGATTCAATAAAGATCATGGAGGAAATCCTGAAATTATAGAAAAGGTCTGTGAAATTCAGGCCTCAGTACAGACCCACCTGGTCTGTAGTCACAGTGCTAGGGAGCCTGATAGGATACTTCCTTTTAGCACACACATCAGGAGCTCCGTGCAGGAATTTGCTCTTTGGTGAATATACAGCACTAATTTTTTTTTTCCAACCATTACCATCTTTTTGTCAGTAGGCGACCAATGGCCGCTTTGAAGGAAGACAAGCCGTCTGAGCTCTCACAGGCAGCCCAGAAATTAGAGAGAGGAGCTGGTGTGGCCCCGAGACACAGATGGCTTTAGGAGCTGAGAGCCTAGAAAGATGTGGCTGAAGTCTGTGCAGTGTTCATATCTGTGGATTGGTCACACACACTGTTTACTCCTGAAACTAAGGTCTATTTTATAAACACTAAGGTTAATTCTTTAAAGCGGTTACTTTATTAATGTCCTATGAGATTGGAAATATCAGGTACATATTTTGAATACAGAAAAATGACTCAAATTCCTGGTGAAAGTGTGAAACGTGAACTCTGCAGTCTAGCGCTGTCTCACGAGTGTAGATGCAGCCTTAACTTCGGGTGCAGAGTTCCTGAGGGGCTTCGCGTGCATCCTTCCCTTCCTGGTTATCGCGGGTAGACGGCAGGTCACCGCGAGCCAGCTTACCTCAGCACAGCCACCTTGTTGGTATATGACGTCGCAGATTGAGCAACCAAGTGTCAGCACTTTTACTCTCTGACATGGAGCCTACGATCAAGTAAACGGAGCTGCCTTACTTGTGAAACCCAGAATTTTAATTCTGTTGGTATTTTCACAGCCATGTCTCCAGATTTTATCCTTTTTTGGCAAAATTCTGATGCCACAGCTTGGTTTGATTGAAATAAATATTCCCTGGATGTCTCGTCAGGGACTCTGCTGACAGCCCCAGAGATGCCGCCTCCTTTCAGTAGATTTCATCTGAGCCTTATCGACAGCTCACCATCTTCAGTTCCCTTCTAAAAACATGAAAGTCCTTGGGACGGTCCCAAAGACAAGGCCTGCACATTTATATAATGGCAAAGCATTTTTTAAAAGGGTCGGGTTGAAATAGCTAGGAATGATCCTGTAAAGAAGAGGGACCATTAATGTGAGCGGAGATAGACTAGGTCATTACCACACCTGAAGCAGCAATAGATGTATACAGTGTAAATTTGAAATCCGCCCTTTAGTTTAAAAAAAAGGAGCCTGCGAAGTCCATTTATCAGTTTCCAGCCCCGTCAGTCACCCATCCAATATGTTGGCAGAGTATCGTCTGAGCAGTGTGTGTAAGGAGTAATCATGAAAGCAAAAGTATGTCAGAAAGTTACTTCCAAATGGTTAGAGGCATGTGACTTTTAGTACTGTGTGTTAACGGAATGTCAGGAATGGTATATTTTAACTGTGTGCAAGATAATGTCGGTGTGCACAGAGGGTCTTTTTTTCCTTTTTTGATTAGTGCTGTTAGTGTTCAAAGAATAAAAATGGTTGTTTTACAGTTTAGATTCCAAGATAGCAAAATCTGATTTTTCAACCATGACCTGCATGAGAGAAGCATCCTAGGAAGTCTTAGCTCATACTTCTGAGTTCTTAACTTTAATTTATATAGTGTTTTTTTTATGTTTTAATATTTTTGTGAACTGGTGTAAATTGTTAATGCATATAAGCTTGTGTATTTTTGTAAATAGTTTGTGATTTATTTCTTGACTCATATGTAAATATTTAGAGTCTCATTTCTTCAAAGCTTATTTGAAGCTGAGTTGTGGGTTTGGGGTTTTGTTCGTTTGTTCCTTTGTTTGTTTTGGTTGGGGTGGGGGGTGGGGAGAGAAGGGATTTTGTATTCTGATAATCCAGACGGAGATATCTTGTGGTTTAAAGCAAATGTCCCACTGAAAGCAATTCAAATATCAAGAAAATTATTTCAGGTTAAAACACACTTCCTGTGTACGTGTTTGCTTTCTAAACCTAATGTGAGTTATAACAAAGTAGATGGTAATCAGGGGTAATCGGGGCTATTCTGGCCAAAAGATGAGTGTGTGTATGACACAAATTCTTATACCAAAAAGGTACTTTATTTGAGGGAAGGGGTTTAATATCTCCTGTCAGTTTTTCCCCAGGGCGGACAGTCTCTTTGGAACTGCAGACCTTGGCCTGCGCTGCAGGGTCTGAGCAGACCTGCTGCTGGTCAGGCTGCCTGCAGGCATCTGTGCACTGGGCTGCCTTGGGGCTCCTAAGCTTAGGGTGCACAGGAGGGTGAACTAGCTTCTTAGGGTTCTCCAGAAGGGGGTTCTGTATACAGCCATATTTCTCAAGATTCCCACAAAGCATCCTGTGTACTTTGTGGAGTGAAATGACCAGACAAGAATCTCCTACACCTGTTTCCAGCTGGTGTGTGCGTAAAGATGAAGCATTCCAATGTGTCAAATGCGGTCAGTCACCCAGCTGCCAGATGGGGGTCCAGACGCATTCCTGTGCCAAAGTTCTCAAACGCTTCTATATCAACCAGAAAATTTTGAAGGAAAAAACAAACCCAGTAGCAAGCTATTGAAATTCTAGTTTTCCTACTAGGAATGATAAATTACAAATCACTCTTCATCCTAAAATATTAGGGCCTGTCACTTTTTTGCCAGTCATACAGAAGGAAAGTCACCTGTTGCATACAGGTGACCCTGGCGTCCCCACCATGTTCTG EMBV3_26814 TCCTTGAACTTGGATCACTGGGTGAGGGGGCTCGATCCCCAAGCCAATGCAGGAAGCCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07558 TCCTCAACTTGCTCCTTATGACTGGGCTTATAACTGTCCAGCTTTCCCCTTGGTCCCAGA Gene GeneID:539247|APH1A:NM_001034670:139_cdna Constitutive 1 NULL GeneID:539247 3 GENE APH1A MGC128098 anterior pharynx defective 1 homolog A (C. elegans) EMBV3_11144 CAAGGGCAAGTTCGGCGTCTACACCAAGGTCTCCAACTTCCTCAAGTGGATCGACAAGAT Gene GeneID:280787|F10:NM_001080213:27_cdna Constitutive 0 NULL GeneID:280787 12 GENE F10 NULL coagulation factor X EMBV3_40563 AAAGAATTGCACAGCTTTTCCTACCGAGCCATGATAAGAATGTAGCCCCATCCCTCCCCC Gene GeneID:515178|ABCD1:NM_001046190:55_cdna Constitutive 0 NULL GeneID:515178 X GENE ABCD1 MGC129031 ATP-binding cassette, sub-family D (ALD), member 1 EMBV3_40927 TTTGCCATGCTGGCCTACTTCATCACCTGGGTCTCCTACATCCCCCTCTTTGCCAATGTA Gene GeneID:100336837|LOC100336837:XR_083884:673_cdna Constitutive 0 NULL GeneID:100336837 16 PSEUDO LOC100336837 NULL taste receptor, type 1, member 3-like EMBV3_08764 AACTGTGGCAGAAAGTTTTAACATTGGGATATAATACTTGTATGTGCATATTTCACCACC Gene BVT0102_044457 + 1 EMBV3_43212 GK000023.2:33246915-33268311 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133284 TCONS_00133283 1 XLOC_081078 Coding TCONS_00133284 XLOC_081078 Coding Coding DCDC2 23:33102819-33252049 j TSS99584 6868 1 TCONS_00133284_5 304 0.0337798485730926 9 0.95403708394481 2.52910557984933e-06 3.53080763454229e-06 8.17757031481482e-06 1.54607184070759e-06 7.47417918954101e-06 0 3.28628736204859e-06 8.39976311297895e-13 6.86540026429062e-06 1.67599883534782e-05 3.57222551181042e-06 2.76143034197355e-13 0 0 6.22594531496854e-34 0.000731914495954262 0.00059164744784161 0.00308982037234653 0.000105429985406763 1.92390885870996e-23 4.23164897486821e-28 0.000504587443623357 6.44869294193307e-07 0.000491364090170305 5.44567819650921e-06 5.26369361793147e-25 3.30501433902911e-06 7.67617569650932e-05 3.58778592835631e-08 9.72925734376707e-05 XM_002697540.2 DCDC2 PREDICTED: Bos taurus doublecortin domain containing 2 (DCDC2), 0.0 5954 98.34 0.490390215492137 NM_016356.4 DCDC2 Homo sapiens doublecortin domain containing 2 (DCDC2), transcript 0.0 2367 76.49 0.459231217239371 TCONS_00133284_5 sp|Q9UHG0|DCDC2_HUMAN DCDC2_HUMAN Doublecortin domain-containing protein 2; 1e-165 474 81.13 0.986842105263158 1 coding 0 0 0 0 0.0178008429472429 0.863558769467711 0.0435563504929015 0.453121432363868 CGGGCTTGTCTGTTTCGCGGTCGTTTCAGGACGCGACCCCGCGCCGCGCGTGTGCTGTGAGGCCGCTGGGGCAGCCGCGGTGCCTCCCCCCGGAGAAGCGAGCCGCGCGGGAGTCCCGAGGGGAAGATGAGTCGCACCAGTGCCAGGTCCGGGCACCTGTCGCAGCCGGTCGTGAAGAGCGTGCTGGTGTACCGCAACGGGGACCCCTTCTTCACGGGCCGCCGTGTCGTCTTCCACGAGAAGAAGGTGTCCAGCTTTGACGTCTTCCTCAAGGAGGTGACGGGCGGCGTCCAGGCGCCCTTCGGAGCGGTTCGGAACATCTACACCCCGCGGACCGGGCACCGCATCTGGAGGCTAGACCAGATCCAGAGCGGGGGCAACTACGTGGCCGGGGGCCAGGAATCCTTCAAGAAACTCAAGTGAAACCAGTAACCCACAGCAGGATCAATGTGTCATCTCGCTTTAGAAAGCCACTTCTGGAACCCTGCACTATCTTCTTGATTGCAAATGGAGACCTCATAAACCCGGCTTCTCGACTCCTCATTCCTAGAAAAGCCTTGAATCAGTGGGATCATGTACTGCAGATGATCACAGAAAAGATAACTCTGAGGAGTGGGGCTGTCCACAGACTCTACACTTTAGAAGGAAAACTGGTTGAGAGTGGAGCAGAGCTGGAGAATGGGCAGTTTTATGTGGCTGTCGGCAGAGATAGGTTCAAGAAGTTGCCTTACAGTGAATTACTTTTCGACAAGTCGACGATGAGAAAGTCTTACGGTCAGAAAACTTCTTCACTACCTCCAATTGTAGGATCCAGAAAGTCTAAAGGCAGTGGAAATGATCGCCAGTCTAAGTCGACAGTTGGATCCAGTGACAACTCATCTCCTCAGCCCCCGAAGAGGAAAGGGAAAAAACATGCGAATTCGGAAAAACCCACGAAAGGGAAACAAAATGCCAAGTTAAAGAGTTCACCACAAACAATCCCAAACAGTGATGAAGGCGTTTTCAAAGCTGGAGAGGAGAGATCAGAAACGCGGGGGGCAGCTGAAGTCCAAGAAGATGAAGACACTCAAGTTGAGATTCCAGTGGACCAGAGGCCAGCAGAAATAGTAGATGAGGAAGAAGATAGAGAGAAGGAAAACAAGGAGGTGGAACAGAAGGACGACTTCTCAGGAATGAATGGTGAAGTTAAAGAGGAAGAAGGAGACCAGGAGGAGCCTGAAGCTGCAGAGCAAGCAGAGGAGATCCCAGATCACAGAGAGGAGCAGGCAGGTTCTGCTGCTCGTGTGAACGGAGGGACCGATGAAGAAAATGGCGAGGAACTGGCGCAGGTTAATAATGAGCTTCAAGAAGCGGTGGAGGAGGAAATAAAGTCTCAAGGAGCTGGCAGTGAACATGAAGAGGCTGACTTGGACCCTCAAAGACCACCAAAACCAGAAGTAAAAATCACTAGTCCACAAGAAAATGATGACAACGAACAAAACAAGGATAATTTGTCATAGCATGGATGATTTTTTAAAAGAGAGTATATTGAGTATAAGAAAAATGAAGGATTAAATACTTGAAGAAGAAGTATATAGCTATTGCTGAACATAATGTGGCAATGTGGTTGAATACTACCTACTGAAATTTAAAATTAGAGGCCTGACTAATGGGAAAGACTAGATAACTTTGAATAGCTACTAAAGGAGAGTGACTTCTTTTTATGAGCTGTGTTTTTAAAAGTCATGTAGAAAAATTAAGCGTAATAGCGGGGATTTTGCACGGGAAGACAGTTAGCCACTTGTCTTTGTAAAGATGAAAAAACACAGGACCACACCTGTTCTTGAGAAGTGAGATTATTGGATGGCAGCCGATGCTAAAGCCCTTATCTAAGAGGGCATAGAATTTAAAAAAATGATAATAGGAAAGCATGTACTATTTTTTTTAAAGCAATAAACTCTTGAATAAACTCATTGCAACTTAGTTTCAGAGATAATTTGAAGATGGCAATAGACTGAAATGTTTCTGTGTCCTGTTGACATTCCTTTCTTTCTTCCTCCTTAGCCAAAATCCACCTTAAAAGAACTAAAAGGATAATGCAAGGTATTCATTTTGGAAGGAGGAAGTATTCACTCAATGTATTCCTCGACAATATTGTCATGCCCCTCCCTTAAGTACTGCAGATTTTAATGACACACACTCAGGAAGGAATTACAGAAAGGAACGCCTAATTATATCACTGAGCCTGTCTGGGTGGTTTACAGATTCTGGTATCCTATGGATTTTAGCTGATCCAGTCTACCATTACCAATAATACTCCTCTCTTCATATTATTATATTAGAAAACTCAATATTGGGTATTCCAAAGATTGAATTTTCTCCAAACAGTTTTTTTTTTTAACAAAAAGAGCAAGGTTGTGTAGTAGGAAAAAAAACTTAGGCTATAAGATTTTGTCACACCTCAGTTTCTCTTGCTTTTTATGTTATTTTTTATTAGAACTGCCCTGTCGTATTTTTTCCCTTAGGGGTATCAGCAAATACTTCTTTTCATGGTCACTTATATTTAGACTTTTAAGGAGATTCTTTTCTCTATAATTTGAAGCTATAGGATAGAAATTGTTGAAAAAAGTTTAAAAAGTGTCATAATGAAACCAGTTCCTGATTACAGTTCTAGGGTTAATTAAATTAAAACAGATTGCCTCATCAGGTATATGTGGGGAAAAAAGGTCACGTTAGTTTTGAATTTTTAAGAGATGATGTAGTTCTTCCTTAAATATAGAAATAATATGTTTTCTCATATTAAAGAATATTTTTTGTTAGTTATGTAGAAATTTGCAGTTTTAACTTCTTATGCTTTCATCAAATTCATTATTAATGATGATTTTGAAAGGTTTACCGCCCCCCCCGTCCAGGTTTCATAACCAATCATTTGGAATTAAAGTTATATAAAGCGCTCAATAATACTATAGAAAACTGATATATTTTTCTTAAAAGCTATTTTAATATTTTCCATAAATAGGAAGTATATGCAGTGACTATAACAGTATTGGAAAGAGATACTGATATACAGGTATATTAATTTAGGAGGATGAATTATAAATGGGGTACTATATTTCTAATATAAACTCTAGATTGTTCTTTCTACTAGTAGGTTTATTTTTTTCAAGTGAGACAGTATAAAGCTTTACAGGTGATAGGCAATCATCTTAATAACCTTTATTGCTAGGGCAATAGACTACTATGTTTTTTATTGTTAAATTCCTACACTATTACTGGGTCTGGAGTTAATGATTTCAAATAGTTTATAAAAATAAAAGATTGCATATAAGAAATTATAAGTAATTATCAAGGTGATTCTTCTTTCTTTAATGAGGATTTTATCTGTCTCTTCCTTCTTCAATAAAGATATTGTCTCTCATTTTTTCCTGTTATTTGCTTCAACATTTTGGAGAAGGGAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCTATGGATAGAGGAGCCTGCCAGGCTACAGTCCATGGGGTTGCAAAGTAAGACATGACTGAACGACTAATCACACACACACACACACACATACACACTTAACATTTAGGTTTGGAGGAACTTTTTAAGAGTCATCTTAGTGAAGCACAATGTCACTTTAAATGAAACACAACTTTTGGTATTTAAATATACTTAAGAAAGTGATAGGCTACAATAACTGTGGCAGAAAGTTTTAACACTGGGATATAATACTTGTATGTGCATATTTCACCACCTATCTATAATTGTGACCTAACTTGAGGAATGAACAATCACTAATGACTTTAAAACACTTTGCAAGCATATGTTACTAAGAAAAAAAAAAGAAAAAAAATGTTGTCTTACCAAAGAAGAATCATTAACAGATGATTTCTGTAAACGGTCGTTTTGGAGATGACTTTAACACAAATGATGCAAATTAGTTCACCTCCCAAACGATAGTTTTCTTTGGGAATGGTGGCCTCCGTGGAAGATTAGCTCCACAAATTGAGACTCACTGACTGGTTTGGAGACCATTTATGTGAGTGAGCAGAAGAGATCTTGGTTAGGCTTCAGGTATTGTTTTATAAAGGGTTCTATGAAAAACCGACGGAGCTTTTATGTGGTGACCAGTCATAGAATGTTTTGATCTGTTACTTCTTGTGATAGTTTTCAGTTTTAATTTTATTTTTCATAGTTTTAATCAAATGCTTTTCTTAAATTTAATTGCATTTAACACACTTGTCAATAATGGGTTTGTTAGTTGAAATGGAACACTGGGAGTTACACAGTAAGAGTAAGGAAGATTTTTCAGTTCAGTTCAGTTGCAGTCATGTCCGACTCTTTGCCACCCCATGGACTGCAGCACGCCAGGCTTCCCTGTCCATCACCAACTTACTCGAACTCATGTCCATCCAGTTGAACTAAAGTCATTTTTCATGCAAAGGACAGTTTATCTGGTTTAGCTTCCATTTAAATAGCATTTGAGCATCCATGGATTTCTCATATAAAACAAGATACTCTGGCCATGAGATAACTTTTTACTCATTATATTTCTCTATGATCATAGGATGACTTTTTATTTAAGACATTTTTGGAGGGGTGGTATTAGAAAGCCAGACTCATAGGAAGAGATTAATACCCTCTTGTGCCTTCCATTTTATTCTGTGTTAATTCTTGTTGTCATCTGTAAATGTAGACCCATATAAATATAAATATATATATATATGTGTGTATATATATATATGACTTGGAGTCAGTTAGATCTCTCCGTAGGCTCACAAATGTGAAGCCATACTAATATGAACTTATGTTAACTCTTCTAGTTTACAGTTCATAAACCAACATCCCCCAAAATTTCACTGAATACCCTATCTTCTACCCAAAGGATAAAGCAAATTCACCCAGTTAAAATTGTGACCACTGAACAACAGGAAGTCGTCTTTATTTTGTTAACTGACTCTCCTAAAGGATCAGCTCTGTCCTTTCATTTTTTGCTCAACAAGGAGCCAAGGCAAAAATTTAGAAAGCAGATTAATTGCTAAGCAGAAAGCTTCACATCTGAAGTGTTGCCAATCTGAACAGAAATCGACCGCATAGATACACATAGACACATACCAGACACTCACACAGATGCACTCACACACTTTAAAATGTTGAAAAAGACTTCCTCAGGCACAGCATTAGTAATGCAACAAGGCTCTTGAGAGAAGCAATGGATATAAACTGTTAGGAAAGGCTAAGAAATGATGCATATCATGGTGCTTTAAAAGTTGGTTCCCAAAGACTATAGGATATTTTAAATTCTTCTCAAAATAAAAATCTACCAGCGTTTTAATGGAAAATTCTAGGGGAGGGTGAGATATGTATCTATATAACTTTATTTTCTCAAATTAACTACAGTACAGTTCTTCAGTCATCAGTCTTAAGTACCAAAAACTTTAGGTGCAGAATATGTCCTGCCAACACAGGATCTGTGAAAAGTCATTACTGCTTGTTAATGTGTGTATGATTTCCGTGAACATCTGGAGAGGACTCTGGCATCAAGTAGCCAAGTTCACTACAAATAGAATAAAAGTCTGACTTATTAATCTATTAGTTTATCTAATTTTCAAATTTAGTGCAGAAGATTTTTAGGTTCCTTGTATGAGTGATACATCCTGAAATGGAACAGTTTTTTTTTTTTTTTTTTTTTTAAGGTTAGTCTGCTTTTCTGAGGTGACGAGCATGTACAGTTCTTCATTATTGAATATCATTTTTGTAAATAGTGTAAGATTTTTGCTTTTCAGAAAATATCCCGGTATTTGGATGGGTCTGATTTTGTTCTTACTACATGAAATTTGTATATTTCTTACCATGAAGTCTAAGTGACTTGGATGGAGAACAAATATGTGCCCCCACATGTTGATGAGGAAGAAAAAGACTGTTTTTGAAGAGACATAATGTCCTGTAGGATATGGGGAATTAGGAAAGAATTAAAAAAATGTCTTGATAATAATAAAGCATTTATAAAATCAGGAGATGACTAATGCAGGTTCATTGACTTGAGCCAACAACGACTTAGCTTTAATCTATGAATGGGACCAAATGAGTTCTCTGTAGTTTCATCTGCTTAAACCATATATTTTAATTGAAGGTTTGAGTTATTGTCATAAATGTAATGGCATATGGGAAGAAGAAATGATAGTAGTCAATTTTAGAAGAAGATTGCAGAAAACCTATTTTTCTGCTTCAATATTTTTCCTTTGTCTTAAATCCTTAATATGTCCAAAGATAATGGGTGATTATTGAAGTTTTATGTAAAAATTAAGTTGAGCTCATCATTTTTGTATTATTTATGTTTAGAACTCCTCTTTGTAAGGAAAATTATTTATGTTTTGATCAAATTATGAGAATTTTAGGTTTTTATTTCTGTATCAGTGCTCACTCTAAAATATGTTTGCTGTATTTTTTCTCACTCTAAAATATAAGTTTGCTGTATTATTTTTAGCAAATCTGTGTTTTATATAATTAAAATGTGTTTGAATAGTTGTTTGTTTATAATGTTGTGTTGCTAATATTTCATGTATTAATTTGTATATGATATTTTTCACAAGCATAATAGTAACTTTTCATTTGAACCATGTGGAAATTCAGCACAGTAAAAGATACTTCTGTTTCTATTTGGCATAGGTATTAAACCTCATTTGTAAAGAAATTTTTTATAGCTTCATATACATGTTGTTTAGCTGATAAAAATTTGAGGAATTTTTTTTAAAAATTGTTTTTTTCTTTTATGAAATGATATTAGAGAAACACAGGTTCAGAATTTTTGCTACGATAAATAAACACATCTTTAAAACAGGGAAAGTTACTCACATTTTTGTAGCTAGAGCTATAG EMBV3_24964 AGTTAAAAATTGCATCTGATCGATCTTCCCAGGAGGTTTGGCTTCTCGGAAAGAGCAGCC Gene BVV0102_395381 - 1 EMBV3_03256 GK000011.2:88179954-88328995 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025862 1 XLOC_014841 Coding TCONS_00025862 XLOC_014841 Coding Coding MBOAT2 11:88208290-88446394 = TSS18660 3537 1 TCONS_00025862_7 638 14 0.985203882353435 6.92298007217264e-05 8.90052966775662e-09 7.19027016852987e-09 1.31007275945583e-18 2.80693235148977e-14 7.28692599331474e-16 9.7120307418863e-20 7.22268061347658e-10 7.7827488691715e-09 2.17857474642059e-05 7.20713604460731e-23 9.48884893526081e-150 2.15597432917722e-18 6.60905873478813e-11 1.06001902699575e-14 0.000130684631089067 3.30304029257712e-18 6.19795069239614e-10 1.54422887407215e-17 6.89867325442591e-09 8.13531264343879e-10 8.0666432533534e-05 0.000152586628031867 2.87943764771289e-09 6.20102669941857e-09 8.60601992988497e-14 6.39085848515858e-05 1.03580200764763e-21 1.14577522968868e-12 2.69641962408421e-09 XM_001253490.5 MBOAT2 PREDICTED: Bos taurus membrane bound O-acyltransferase domain containing 2 (MBOAT2), mRNA. 0.0 5607 100.00 0.878710771840543 NM_138799.2 MBOAT2 Homo sapiens membrane bound O-acyltransferase domain containing 2 (MBOAT2), mRNA. 0.0 2774 80.51 0.877297144472717 TCONS_00025862_7 sp|Q6ZWT7|MBOA2_HUMAN MBOA2_HUMAN Lysophospholipid acyltransferase 2; 0.0 924 90.10 0.774294670846395 1 coding 0 0 0 0 0.00944643680115353 0.93308182418607 0.0184577978031068 0.689958788428068 ATGACAAAAGCCAGTGAGATGGAGACAGATGCGGTCAGAGGACACAGCTGGCGCTCTGGCTGCTCTTTCCGAGAAGCCAAACCTCCTGGGAAGATCGATCAGATGCAATTTTTAACTGATGAATTGCTGTCGAAAGCCCATTCATTAAAACACACTTTCACTGCTGATGGAGTCATAAAATCACAGAAGCCCCAGCAGCAGCGGGGGGAGACGCTGTCCCTGGAGGCCCCGGATGGCTCTCAGTGTCCCCCAGCAGCCCTCCTCTCGCCCGAGGACTTGGCTGAGTGGCAGAGCGCAGGGCTGGCCCTCCTCGTGGTCCCCACCACCCCCAGGGGTGTCACGGCCACAGCCAGGATCATCTTTGTGGTCACAGAAAAGCGGTCTGCATCAGCAGCCACTGGTCTGTCCCCTCTGGGGAAGAGGCCGATGGTCAACTTTGTAGTGTGCCAACTCTTTGCCTTGCTAGCAGCCATTTGGTTTCGAACTTACCTACATTCAAGCAAAACTAGCTCTTTTATAAGACATGTCGTTGCTACCCTTTTGGGCCTTTATCTTGCACTTTTTTGCTTTGGATGGTATGCCTTACATTTTCTTGTACAAAGTGGAATTTCCTACTGTATCATGGTCATAATAGGAGTGGAGAACATGCACAAGTACTGTTTCGTGTTTGCTTTGGGATACCTCACAGTATGCCAAATCACTAGAGTCTATATCTTTGATTATGGACAGTATTCTGCTGATTTTTCAGGCCCAATGATGATAATTACCCAGAAGATCACTAGTTTGGCTTATGAAATTCATGATGGGATGTTTCGGAAGGATGAAGAGCTGACACCGTCACAGAGGGGATTAGCGGTCAGGCGCATGCCCAGCCTTCTGGAATATTTAAGTTACAACTGTAACTTCATGGGTATCCTGGCAGGCCCGCTCTGCTCTTACAAAGACTACATCACTTTCATCGAAGGCAGATCGTACCATATGACGCAGTCAGGTGAAGATGGGAAAGAAGAGATACAGTACGAAAGGACAGAGCCATCACCAAATGTTGCAGTTATTCAGAAACTCTTAGTCTGTGGACTTTCCTTACTGTTCCACTTGATCATCTCTAAGATGTTACCTGTGGAGTACAACATTGATGAGCATTTTCAGGCCACAGCTTCATGGCCGACCAAGGTGATCTATCTCTACGTCTCTCTTTTGGCCGCCAGACCCAAGTACTATTTTGCATGGACATTAGCCGACGCCATCAACAATGCGGCAGGCTTTGGATTCAGAGGGTATGACAAAAACGGAGCTGCCCGTTGGGACCTAATTTCCAATCTGAGGATCAAGCAAATAGAGATGTCAACAAGTTTCAAGATGTTTCTCGATAATTGGAATATTCAGACAGCTCTCTGGCTCAAAAGGGTGTGTTATGAACGTGCCTCCTTGAGTCCCACCACCCAGACCTTCTTCCTCTCTGCCATCTGGCACGGGGTGTACCCGGGCTATTACCTGACCTTTCTCACCGGAATGCTGATGACGCTGGTGGCGCGAGCTGTGAGAAATAACTTTAGACATTATTTCATCGAACCTCCCCAGCTGAAATTTTTGTATGATGTTATAACATGGATAGCAACTCAGATAGCAATAAGTTACACAGTTGTGCCATTTGTACTTCTTTCTGTAAAAGCTTCACTCATGTTTTACAGCTCCTGGTATTACAGCCTTCACTTTGCTTGTATCTTAGTATTATTGTTGTTGCCGGTGAAAAAAACTCAGAAAGGAAAGAGTACACATGAAAACGTTCAGCTGTCACGATCCAAAAAGTTTGATGAAAAAGACAATTCTTTGGGACAGAATAGTTTTTTCAGAACAAACAGTGTTTGCAATCAGAATCAAGAAATAACTTCTAGACATTCATCATTGAAGCAATGATGAGGAAAGCACTCTGATGGCTATTTTCTGTATGTTAAGGGGAACCAATCTTAGCACCTTTCAAGGGGTCTGTGTCTGTTGGGGAAGGGATCACATGGGGGGAAATCAGCCGGTTTTAGGTAGGCAATTCCCTGTATACCAGCTTGGAAATGGGGCGAAATACCCCTCCCATGCCATGTCTGGTGGGCCACGCCTTATCGAAAAATATTTCCATTATTTCAGTGGGCACTCAGGACCTCAGCATATGTCCGTAGGGTCGTATGTGTGCCCTGTTGCTGAATGTACGCTGTGTGTCCCAAGGCACTGAGAGAGGGAAAAATAATCGTGTCACTCCGGATGACTGAGAAAAATTAACTTCTCCAAATGAATGTCTTGCCTTAAACCCTCTATTTCCTAAACTGTTGTTTCCTAAATGGTCTTTTCAAGTGTGGCATTGTGTGAACGCTCTTTCAGTATTTGCTGTTGTGTGCTGCACAGGAATTCCAGAAGAATTTGAACAGAATTATTTAAGATTGTGGATACTTTAAAATGCAATGAACATCGCAGTATTGGAAGGGTTTTCCTAAAGTTTCTCAGATGACTACAGTATGTAGCAGAACTGTAAGCAGTGGTGGATGCCAAATTGTAGGTAGTTTATTTTCCTGGAGAATTTGATCACCCTGTGTCAGTGAGAGAACCCTCAAGGAAGGATTCCTTAAACATAATAAAAGGTTGGTGATGTGATATTTTAAGCTTATTCTTCTTCTTCAAAAAAGAGAGAAGATGACAAACGAAAGAAGGAAGGCGTGAATGAAGCGCTGCACCTGGCCCGTGGCACCTGTGTTTGTACACACGCCTGCACGTGGCATGGGTCCGAGGCTCAGTGGAAGTGCTCTTCACCCCGATTTACCTGAGTTGTGTGTGATCCTGTAAGACATAAAAGTTTAATAACTTTATAATCACGTTGGATTTTTAAGAGATGTATCAAACATAAATTATATAGAATTATAAAAGGATAATGAAAGTAATAGCGGGAGATTGCTTAAAGGCTTTGAAAGAGACATCATTGAGTGAAATTACTGTCTAGCGATTCACTTTTTTAATCCTTGAACAGTTGAATTCATATTTGGTTACGTTTTAGGAAAACAGAAACTTCAAAGCCATTGGATCTGAGCCACCTTTGTAGAGAACAATATAAATTAATTTCTAAACTCGTTTATCTTCTCTCGTGAAAGTTTTACCGTTAACTCTCGTTAACGAGTTTCAGATTCTTAAAGCAGAAAATGTGCTTTTTATCTTACAGGCCATTTTCACCGTAATTCATTTTGCCTTCAGTGGCTGGGTTCCTCCTTTGATCCCACAGTCTTATGATGCTTCAGCAATGAAAGCAGAGGAGAGGGTTGTGGTGCCAGCTTGGTATCAGGGTTCCGGTGGCCCAGGGTGATGAATGATGGGCCGACAGGGAGAAGGATGGGCAGGGTCTTCTGACTTCAGTTTTCTGTGACCCTTCTTTTGTGGAATTTATTTTCTTTTTTGCCTTAAATTTTTAAATGAAATGCAAATTGTCTATCTATGATGAGTCTCTTTTTTTTCTTCCCTTGTCATTAATAAATTTGCAAATGAAAGTTAATGACAAAACAA EMBV3_27683 GTGCCCAGAAACTGACTACATTCCTGAAGGAGAACCACCACATAAGCCTGCACATCCTTG Gene GeneID:507162|APOBEC3A:NM_001163936:28_cdna Constitutive 0 NULL GeneID:507162 5 GENE APOBEC3A APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A EMBV3_16750 AATTTGAGCAAACTCTTGGAGCTAGTGGAGTACTGAGGAGCCTGGCACGCTGCAATCCAT Gene BVV0102_036407 + 0 NULL GK000006.2:13744546-14135993 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204460 1 XLOC_124447 NonCoding TCONS_00204460 XLOC_124447 NonCoding NonCoding - 6:14021749-14024168 - TSS152950 2074 1 TCONS_00204460_5 128 0.753134040501447 2 0.143093465674111 0.000164003112223145 0.000382347819298469 0.000151704964329602 0.000244240209772541 4.76102108772058e-06 9.48592808571951e-05 9.56018078135439e-05 8.5555275573028e-06 6.84774660581374e-05 0 0 0 1.38345457419249e-06 0 0 0 0 0 0.000280061062503842 9.70878068493546e-05 0.000181499891859244 0 0.000128277451965768 8.08323229348141e-06 0.000325712894783991 0.000159661023531759 9.60517116489644e-05 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 984 76.98 0.608003857280617 0 noncoding 0 0 0 0 -0.00124512234722572 0.993224127071336 -0.0103991186946699 0.854166132712458 GACTCTCAGCAATACCCTGTTTTCTCTTCTCTCTACATTCTACAGGAAACTATGTATTGAACCTGGAGTCAGAAGCCTGTGATTATAATTTGCCTACATTGTTTATGAGCTCTGTGACTCTAGGCTTCAATAGTATGTGAACCGAGACCTTCCAGATGTTCAAGCTGGGTTTAGGAAAGGCAGAGGAACCAGAGATCAAATTGCCAGAATTTGCTGGATCTTGGAGAGAGCAAGGGAGTTCCAGAAAAACATCTACTTTTGCTTCATTGACTATACTAAAGCTTTTGACTCTGTGGATCACAACAAACAAATTTAAGAAAATTCTTAGAGATGGGAGTCCCAGACCACCTTATCTGCCTCCTGAGAAACCTGTATGCAGGTCAAGAAGCACCAGTTAGAACCAGACATGGAACAACAGACTGGTTCCAAATTGGGAAAAGAGTATGATAAGGCTGTATATTGTCATCCTGCTTATTTAACGTCTATGCAGAGTACGTCATGTGAAATGCCAGACTGGATGAATCAATCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAGCAGCCTCAGACATGCAGATACTATCATTCTAATGGCAGAAAGTGAAGAAAACTAAAGAGCATGTTGATGAGGGAAAAAGAGGAGAGTGAAAAACCTGGTCTGGAACTCAACATTCAGAAAACTAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATGGAAGGGGGAAGAATGGAAGCAGTGACAGATTTTCTTTTCTTGGGCTCCAAAATCATTGTGGATGGTGACTGTAGCCATGAAATTAATAGACGCCTGTTCCTTGGAAGAAAAAGCTATGACAAACCTAGACAGCATATTAAAAAGCAGCAGAAAAAAAAAACCCAAAACAAAAAACCCAATCAAAAGCAGAGACTTCATTTTGCTGACAAAATCTATATAGTCAAAGCTATGGTTTTTCCAGGAGTCATGTATGGATGTGAGAGAGGGGCCATGAAGGAAGGTTGAACGCCAAAGAATTGATGCTTTCAAACTGTGGTGCTGAAAAAGACTCTTTCGAGTCCCTTTGATTGCAAGGAGAGCAAACCAGCCAATCCTAAGGGAAATCAGCCCTTGAATATTCACTGGAAGGACTGAAGTTGAAGCTCCAATACTTGGCCACCTGATGTGAAGAGAGAACTCATTAGAAAAGATCCTGATGCTGAGAAAGATTGAAGGCAACAGGAAGAGGGGGAGGCAGAGGGTGAGATGGTTGAATAACATCACCAACTCAATGCACTTGAATTTGAGCAAACTCTTGGAGCTAGTGGAGTACTGAGGAGCCTGGCACGCTGCAATCCATGGGGTCATAAAGAGTTGGATACAACTTAGTGACTGAACAACAACAAGCTTGGTCAAGTCCTTAATGTCTTTGAGCCATGTCTATAAAATGGGATGATAATAAATCATGACGTTGAATTCTTATCTGGATCAGAAACTTCTTCAGTTATGAAGATCTTTTATATATTCACATTCCATTTTCTTCTTATAGTAATGCAGATATTGATACCCACTCAGTTTATCTCAGATTCCAGAACTGGATGGTAAAGTGTGAATGGCCCTAAAAGAAAGAGTAGCTAAATGGTGACATATAGGATTGGAGCTATTAAAAAATCCTTTCTTGACTCAAGCCAGTATAAATTCCAAGCTGCTGGCTGGTATCAGGAATTTGATAGGGCATCACTGAGACAGGATGTGAAACCACCACCTTCACACATGCAAAGTAAAATTTGGGTCAGTGGTTTTCAGCTTGGCTGCTCACAGGACCTGAGAAGCTTTAAAAACTACTGATGCCCGGTTTCTATTCCCAAATTTCGTGATTTAATTTGTCTACAATAGAGCCTACAAAGAAGTTTAAAATACTCTCCAGTACCTGGTTTGATTTAATGTACAGTTATAATTATCCGACTCTTTGCAACCCAATGGACTGTAGGCTACCAGACTCCTCCATCCATGGAATTTTCCAGGCAAGAAAATTCTTGCCTGGAGGGGGTTGCCATTTCCTTCTCCAGGAGATCTTCCTGACCCAGGG TCONS_00204461 TCONS_00204462 TCONS_00204463 TCONS_00204464 TCONS_00204465 TCONS_00204466 TCONS_00204467 TCONS_00204468 TCONS_00204469 TCONS_00204470 TCONS_00204471 TCONS_00204472 s 3' 112216 TCONS_00204461 TCONS_00204462 TCONS_00204463 TCONS_00204464 TCONS_00204465 TCONS_00204466 TCONS_00204467 TCONS_00204468 TCONS_00204469 TCONS_00204470 TCONS_00204471 TCONS_00204472 s 3' 111819 EMBV3_40664 GCTGACTCTGTTCTTCTGTACACATGGCCATTCCTTAATGAAGCCTTAGTTCCTAAGTTC Gene BVV0102_116666 + 0 NULL GK000022.2:44304910-44384743 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25509 CAAAGGAACACCCAAGATGTCGAGAAGTCAAGGATGGGGAACGGAAGATCGCAGGCATGA Gene BVV0102_173282 + 0 NULL GK000023.2:9643475-9683972 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133986 1 XLOC_081270 Coding TCONS_00133986 XLOC_081270 Coding Coding - 23:9679947-9681777 - TSS99964 1732 1 TCONS_00133986_1 126 0.394919168591224 2 0.0541279387643521 0.000769836672728991 0.00114292210449799 0.00191544906798356 0.00234453511219502 0.000379694781381188 0.000140438479133447 0.0003838425781655 0.000356863642338205 0.00024599800817667 0 0 0 1.32530327778998e-05 0.000730586000367263 2.83267895715006e-05 0 0 0 0.000989521617970429 0.00378671908815129 0.000284136719571122 0 5.29679129655443e-06 0 2.80019819679117e-05 0.000703734088331934 0.000873628841188158 0 0 0 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 672 92.53 0.256928406466513 0 coding 0 0 0 0 -0.0202520733637886 0.868162114278697 0.0555086197072323 0.384730738353967 ATTCCCCCTCTAAATAGTAGTCTCCTTCTAGCCTGAGTGGGAAGGATTGCTGTTATGGCCTGCCCGCTGCAATCCACAGGTTGTTGCTCCAGGACCTTTTGCTTAAGACCAGCACCAACCCCGTCCCCAAAACTCCTGTCCAAAAAACCACTGAGGTCGCCATCATTGTCTCCAGACTCTTTCTTTGGTCTTGAGGTGGGGCAACCACAAGGCTTTCAGGACTGCGGGGTGCAGCCCAACGATTGGTCAGCCAGGCGAGAGGCCAAAGGAACACCCAAGATGTCGAGAAGTCAAGGATGGGGAACGGAAGATCGCAGGCATGATCTCGAGGTGGCTGTTCACCAGCAGTTTAAAAGCAGCAGCCCTATGCCTGTGGCTCATCTGACTGCACGAGGATGGCTGGTGAATACAGACAAAATGCAAGGAAGTGGATGATCTGCAAAGGACAAGCATACACACCTCCAACCTCTCACCACTAAACAATTACAGACAAAGGCTTTAGGGGATCTTAATTCAGGGATAGGCTGGTGAATTGGACGTGGCTGAAAAGTCTGGTTGGGGCCTGTGACAACAACAAAGAGTACTCCTGGGCTTCTGGTCCCAGCTGTAGAAGGGGGCAGAGCAATGATACAGACCGCGAAGGGACAACAGCCATGTGCAGCTTACACTACAAAAGGCTTACCTGGGTCTAGCAATGCAAAAATTCACTATTTGGGGTCTAGGATAGCTGTGTGTGAAATACAGGACCCCCATGGACATTGATAATGACCAAAGACTCCACTTAACCAGGCATGAAGTTCAGGAACGGGCTGATAAAAATGACACACATTGGCCTTTCCACTTGCCTTACGGACATCCCTCCCCCGACTTCGACCAGGCTAATGGAAAGGATGAAAGAACAACTTAACAACTGAAATGGAAACCTGTTCTTTCCACGGGTGGACCAGAGGCTAACTTAAGCTCTAAGAATTCAAACTGAGCATCCCAGGGGCAATGAGCCCAGGGCTATGTTAACCCAGAAGTGACTAGTCAATACAGTCTGAGCTTAACAGTTAACCGCCTAAAGACGAATGCCTACTATCAGGACAACAACTTACTTTTGCTCTCACCCCAGCATCTCACCCCCAGAGGAACACATTACCAAGTGATCCGGGGACTGGCAGGTAGTCCCTGGTGCTTTGGGTTTGCTGCCTCGTGGGGAGTAGGATTGGCAAGGGAATTACAGATTTCACCTGGATTTATACTAGACCCACCTAAGACTACTAAAGTTAATCCAGCTCCTAATGGAGAAACCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACACACTGGTTCCAAATAGGAAAAGGAGTGCGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTCTATGCAGAGTACATCATGAGAAACGCTGGGCTGGAAGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTGAAAAGCCTCTTGATGAGAGTGAAAGAGGAGAGTGAGAAAGTTGGCTTAAAGCTCAACATTCAGAAAACTAAGATCATGGCATCTGGTCCCATCACTTCATGGGAGATAGATGGGGAAACAGTGTCACACTTTATTTTTGGGGGCTCCTAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACGCT TCONS_00132259 TCONS_00132260 r 5' 2619 TCONS_00132259 TCONS_00132260 r 5' 2173 EMBV3_07548 TGCCAGGTGTAGCTGGGTTCCCTGGTCAACTCTGTATCTTACACTACTTCACAGAAACAC Gene GeneID:540975|TIPARP:XM_002684964:241_cdna UTR3_Alt 2 NULL GeneID:540975 1 GENE TIPARP NULL TCDD-inducible poly(ADP-ribose) polymerase EMBV3_03004 TTTGTGTGACTCACTTTATGCCATATTCACTTTATTAGAGTGATCTGGAACTGAATCCCC Gene BVV0102_368536 + 0 NULL GK000011.2:58455287-58590289 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43458 AAGGAAATTAGGAACATCAAGTGAGGGGAATGAGGAAGGAATTCATAGGGGCTGGACTCC Gene BVV0102_248130 + 1 EMBV3_09534 GK000002.2:96906895-96941045 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103128 TCONS_00103130 1 XLOC_062019 Coding TCONS_00103128 XLOC_062019 Coding Coding - 2:96899113-96909691 - TSS76642 7108 2 TCONS_00103128_8 204 0.278277996623523 3 0.328259430840503 6.10827789555653e-12 0 0 0 8.68244166655021e-08 0 0 9.24578988022193e-08 0 4.05197825894716e-06 0.000382748126862359 6.85406604573528e-06 0 0 0 0.00056724079293834 4.20427753280464e-05 0.00240389862642311 0 0 5.33857914871893e-08 0.000216771298558585 0.000313738778654219 0.000146126236350649 4.87371464881862e-07 0 6.58391296091907e-12 0.000137834264108265 0.000109195925026964 0.000580646172962576 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 0.0 1214 91.73 0.118880135059088 1 coding GGTTTGTTTATGCAGATGCATCTTGGGCATCCTCTCCATCTTGGGTAATAACAGTTCATCTCCTTTTCCTGTTATAAGAGGAGGATACCTTTCAGGAGAGAAGGGGGACATTGTCACATGAGAAATTTATGCCCCACTTTTAGGCAACAGGGGGAGGGCAGAGAACTCTTTCTGTGTCTGATTTTTCTCAGCAGCCTTCAAGTCAAAGTAATCCGTACGCCAAGGGGTTGGAATGGGATATTCTGATCCCCTAAACCTTGACAGGCACTATGAGAATAGCAGTGATATTCCCTTTGGTGGTACCAGCTGTCATCTTCCCTAGGGGCAGAGTCACCATTTTAGGTTTAGACAGCAAGAAGAGACATTATTATAGGAAATATGGCTGCACTTAACAGAAATGTAACTTGAGCTAACTTATACAAAAAGACAATTTATTGAAAGGTGGCTAAAAAATTCTCACAGAATCCAATGGCAAAGACAGAGCTGGCTAGGTGAAGCTGGGTATGAAATTTTAATAAGGAAGTGTTTTCTCATCCATCCTTCCCACTCTTCTCTGGCTGTCTGCTTCATTCACTTCTCTCTTGTGGGTATCCACACCTGCTTTCTCTTTCCCAACCCCCGAGGCAGAAAATAGCTGCCTCTGGCAGATTTAAAGTTTACAGGCTTCATCCAGCAACACAGGGAGATGTTGCTCTCTCTTTCACTCTCCTTGGCTCTATTCCAATTCCAAAAGCTCTCAGGAAGAAATTGTTTGGTGGGTTCACTTGGGTCTGCCACTGGCCTCATCAATTGCAACAAGGAGTAGGGTCTCATGTTAGGAACACTGGGGCCCTCTGCAGCCATACAAGTGCAAAGGGGAAGGTCAATCCCTAAACAGGGGCGACTCCTGGAAATTAATGCGCACCACTGAAGAAGGAATTCATAGGGCCTGGAGTCCATCTTAGGCCTGTTCATGCTGATCATGCTCAGCCACCTCTCCAATGGATGCTGAACTCTGTGTTTAGTGCCTATGGAAACACCAACAGAAGGATAAGGCCCCCTCTGGACAGGGGAACCTTGAAGATCATATCCAGGTTACTCATCGCCTAAGAGAAAACATACACTAATCATCTTTGCCTCTGGACAGGTCATACATTTTTCTGTACCTATCAGAGTGTAACCTTGGGCTTATTGATTATTGGCCAAGTCTTTAACTGTTTGAGCACATAACACGTGAATGGTGGGGTTATTGGGATTGTATTTACCCTTCCTTTGTTTATGTAAGTCTCAAGGAATTTGGAGTGGTGGGTATGGACATGTACACATGGGGTATAAAAGATTTTCACAAATGCTGGTCGGTGTCCTTGGCTAAGACGAGACTCTTGGGCCCACCGGTGTAATAAACTGCACTCCATTATCTGCATTGTCCTTCTGAGTGAGTTTGTTTCCCGGAACACATGGCTACAATATTTGGTGCAATGGCGGGGAAACTCCTTACTTTGAGGAGACAGGTCTCATTTGAGGCCACCCGAGGCTTTGTGGCTTGAATCTCCTAGAGGGGGAAAGGCACCTTGCCCTTCTGGAAGAAAAGCCTTTCAATGCCTGGTTTCTTCGCTTTTGCAGGTAGTGAAGGGCAACAAGGGAACTGAGCACTTAGGTGAGGAGGAGCCCACCCGCTAGGGTGGAGGAGGGGGCCTGATCACCCCCCTGGGAGGGACCAGAAGGGAGACACAGAGAAAACTGGTTTAGGTTGGCGACAACGGCTGCTCAGCACTCCGGTCGATGGTCGTGCCAGGGATAAAGAAAGGGAACTTAGGATTTAAGAAAACCAGTCAGGAGGTGTGTCCACGCCGTTTTAGGAAATGTGCGGAGCACTCGCCACAGGGTTTTAGAAAGAGAATATCGAATTCCGTGTGCTCCTATTCCGCCCTCCACCAGGAGGTACCCATCTGCTGTGTGACCCATCATCTCCCCTGTCAGTGGAAACAGGTAGATTGGCTTCTCGGGAAGGCTCTGGGACATAGGAATCCAGAGGTAAGAAAATGGGAGGAAGCAGATCTAAGGCCACTGTATTGGAGAATATGATTAAGAATTTTAAGAAAAGATTCGATGGAGACTACGGGAAAAAAATGACACCCGGCTGGCTCTGTACCCTTTATGAAGTTGAATGGCCTTCAGTGGGAGTTGGCTGGCCACCAGAGGGAACTATGGACTTAAATCTCATAAAGGCAGTCTATGCTGTCGTTATGGAAAAGCCCGGACACCTGGATCAGTTCCCGTACATAGACTCTTGGCTGGGAATAGCCCAAGACCCCCCCAAATGGGCCTGTTTTTATGCTCCTGGCGGGGAAGGAAAAATCTTGATGGCCCAAAAGGTAACCAAGGATGAGAAGGAAATTTTACAGGACCCTGACGGAAAGGAACTTCCCCCACCGCTGTATTGGATGATGATCCCGCCAGCTAGTATCACCGCGGCCACCGGAGGCCCAACCGGAGGAACCAGCCTGAGACCCGTAAGCCTCCCGGGCTCCTCAATGGTCCCAACAGCTCCACAGGTGGTAGAGCCGCCCTCCTGGCAGGCTCCAGACTCTGGCAGCTGGAGGGACAATGAGCCCACCGGACTCTACCACCCCGGATGCTGCCACTACGTTCCCTGAACTCTACCCTCCACTCCCAGTAAGTACTCCCGGACAAGGGGCAGGAACCACTGGAATTAAACAAAGGCTCTGCTCTGCCAAAGAGCCAGAAGAAAGAATCCTTGCAGATGCCCCTCAGAGAAGTCCAGCAACCTCCAATGATAGGGGAAGACGGTAATTATCACCAAGCTCCTGTAGCTTATTACTCTCAGTCCTTTTCATCAACTGATTTACTGAACTGGCAAAACACACCCCCTCTTACTCGGTGGAACCCCAGGGCATGACTAGACTAATAGGGACTATTTTCTGCACCCATCGACCAACCTGGGACGATATAATGCAATTACAGAAGAGAGATATAGGATCAACACTGAGGCGAGGAAATGGTTACAGGAGATGGTTCCTGAGGGCACTGCTAACCCAGAGAGGCGGATAGAGCAAGGCTTCCCCACTGACAGACCTAATTAGGACTATAATACAGAGGAGAAAAAAATCCAATTAGACAGATACGGGACAGCGATTATACAAGGACTTAAAAGGGGAGCCCGGAGGCCAACGGACATGTCAAAACCAGCTGAAATAGTTCAGAAGGGGAACAAGTCACCTTCTGAATTTTACAAGAGACTTTGTGAGGCCTACAGATATACACCCATAGATCCAGAAGCTACAGGCTCCCAGATTGTTATCAATTCGACGTTTATCTCGCAAGCATGTCCTGACGTAAAACGAAAGCTTCAAAAGACCGAGGGAGTTCTATCCATGTCTAGTTCTCAGCTCATTGAAATAGCAGATAAGGTGTTTTGAACTAGGGACATGGAAATAGAAAAAAAAATATGAAAAACGTTATAAAGATGAGCAGAGGAGAACAGAGAGAGGTTTGCAATGTTGGCTGCTGAGCTTGGAAAGTCTTCCGAAGACTTTTCCACTGCCAAAGGAAAGAACCGCCACCCCCCCGCCCCCAGCTTCGAGGTCAGGACAGCCCTCCAACTGGTCCCAACAGAGGTCTCGGGCTTTATTACATCCAGATCAATGCGACCAATGCCGTGGGTTCGATTATTGAAAAAAATGAGTGCCCAGAAAGAAGGGAGAATAAACCCCTCCCGGTTGCAGAACTCACTAACATAGAAACTGAATAGGGATGCTGGGGCTCAAAGACATCAGGTCCCTGAGAGCCCATGGTAACTTTAAAACTGGGGACCAAGACACTGACTTTATAGTGGACACTGGAGTGAAATTGTCCGTGGTAACTAAGCCTGTGGTGCCACTGTCTAAAGGACAGCCGCAGTAACTGGGGTTTCGGGAGAAGAATGGGTAAGTCATTTTGCCAGCCCAGGAAATGCCAGATGGGGGGTCACCAAGTGACTCATGAGTTCCTCTATATCCCTGAGTGCCCAGTACCCCTGCTGGGGAGAAACTTACTCTCCAAGTTGGGAGCACAAGTGATTTTCTCTCCTGAAGAGAAGCCCACTTTTTGGGTGGGCACAACAACCTATTTAGCAAAACTCTTTGTGCCCCCTCAAGTCGAATGGAGGCTACATGAGACCCCTGGAGATAGACAAGGCAAGGCAACAGAGTTGGAGAAAAGGCTAACTCAGCTGTTCCCTGAGGTCTGGGCTGAAAATAATCCCCCCTGGGCTAGCCAGACACCAAGCCCCTAAAATAATAGAACTCAAACCAGGGCCACCCCGGTGAGAAAGTGTCAATACCCAATACCCAAAGAAGCCTGGATCGAGATTCTGCCTCACGTTCATAGGCTAAAGCAGGCAGGCATCCTGGTGGAATGTCAATCAGCCTGAAACACACCAATCTTACCGGTAAAGAAGGAAGGAGGACAAGACTATAGGCCTGTACAAGATCTCAGATTGGTCAATCAGGGCACTGTAACTCTTCACGAAACTGTGCTAAACCCCTATACCTTACTTAGCCTCCTCCCACCTAAGACAAGGACCTATACTGGCTTAGACCTCAAAGATGCCTTTTTCTGTATATGCCTAGCACCTGCGTCACAACCCATCTTTGCCTTTGAATGGGAGGACCCAATCAGAGACAATAAGCAGCAGCTTACTTGGACCCATCTCCTGCAAGGGTTCAAAAACACCCCAACCATCTTTGGAGAAACCCTGGTCTTGGACCTGAAAGCTTTCCAGCCTAAAAGGTATGGATGTTGGCTCCTGCAATATGTAGATGACCTATTGCCGGCTGCTGAGACTTGAGAAGAATGCTGGGAAGGGACCCAAGTGCTCTTCCAATTACTGGCAGAGGCGAGATACTGAGTGTCGAGGATAAAAGCACAAATCTGCAAGGAGGAGTTAAAGTTGCAGACATTGCCCCTTGGATCCATCACACCAGAGTGAAGAAGGCATACCACGCTGACCTGGAAGATGCCGAGTGGACCACCCAGAAGGACTCCACTGACCCACGGGAAACCAAGATCATTCTGAAGAAGAAGAAGAAAACAAGGTCTCGGATGAGCCCTCTCTAAGATAGAGCTGGGTAAACGACTCCTGCTACTCGGCCTCACCAACACAATTCTGAACCTGACCACTGTTCCTGCACAGGACAACGTCTTCATCTCATGGGCACATTCTCACGTGGACTTCCACAGCTCCTCCAACTGTTGGGGACAACGGATATCATGGTTAAGGTAGAGGCCTTAACTAATTTCACTAAACAGGCCCTTTTAGACAGTACAAAAGCCATTCAAGCCTTGAATGAAGAACAAATTCAGATAAGAAAGACAGTAATTCAAAATAGGATGGCATTAGACATACGCTGGACTGGAAGAAACACAAGCTGGAATCAAGTTTGCCGGGAGAAATATCAATAACCTCAGATATGCAGATGACACTACCCTTATGGCAGAAAATGAAGAGGAACTCAAAAGCCTCTTGATGAAAGTGAAGAAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCTGGTTCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTTTTTGGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGATAGCATATTGAAAAGCAGAATCATTACTTTGCCAACAAAGGTTCGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGCTTGTGAGACTTGGACTGTGAAGAAAGCTGAGCACCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCACTCCATTCTGAAGGACATCAGCCCTGGGTGTTCTTTGGGAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGTGAAGAGTTGACTCATGGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAGGAGGATGATAGAGTATGAGATGGCTGGATGGCATCACTGACTCGATGGACGTGAGTTTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTTGCAAAGAGTCTGACACGACTGAGTGACTGAACTGAACTGAAGACATATAGCAGCCCAGGGGGGGGGACTTGCACCATAATTAAAGTCAAGTGTTGTGTATACATACCTGACCTGTCTGAAAATGTATCCACTGCCTTGGAGGATATGTAAAATCAAGTGAAAGCCATGTCTGATGGAAATATTCCCTTTTGGACTTCAGTCCTGTCCTGGGTAAACAGAGACTGGTGAAAAACTATTGTTACTGTTGTCATAATCGTTCTAATCATACTGCTTTGTGGACCCTGCTTCTTACAAAGTCTTGTGAATTTTGTAACCCAGGGGTTGATAGCGTTTTCTCATGTGAGTGGCCGAAGGGCTAGGGTACAATATATCCCAATAAATGATGCTCATTAAGGAAATTAGGAACATCAAGTGAGGGGAATGAGGAAGGAATTCATAGGGCCTGGACTCCATCTTAGGCCTGTTTATGCTGATCATGCTCGGACACCTCTCCAATGGATTCTGAACTCTGTGTTTAGTGCCTATGGAAAGGACAACAGAAGGATAAGACCTCCTCTGGACAGAAGAACCTTGAAGATCGTATCCAGGTTACTCATCGCCTAAGAGAAAACATACACTAATCATCCCTGCCTGTGGACAGGCCATAAATTTTTCTGTACCTATCAGACTGTAACCTCAGGCTTGTTGATTATTGGCCAACTGTTTAACTGTTTGAGCACATAACACGTGAATGATGGGGTTATTAGGATTGTATTTACCCTTCCTTTGCTTATGTAAGTCTCAAGGAATTTGGAGTGGTGGGTTCAGACACGTATACATTGGGTATAAAAGATTTTCACAAATGCTGGTCGGGGTCCTTGGCTAAGAGGACACTCTGCCTTGGGCCCGCCGGTGTAATAAAACTGCACTTCGCTATCT TCONS_00105983 r 5' 646 TCONS_00105983 r 3' 6954 EMBV3_40034 CTTCCACTGAGGGGCCCACCCTCACGGCAGCACCTGAGACATCATTTCTTGTGCAAAATG Variant GeneID:507549|TIMD4:NM_001075320:2_cdna 702^788 3 EMBV3_07320 GeneID:507549 7 GENE TIMD4 NULL T-cell immunoglobulin and mucin domain containing 4 EMBV3_21525 AAGATGCTGTGTAATGATGTGCTGGTGTCCAGCTCTTTCAGCAATCCCCCGAGTTGGTCA Gene BVV0102_156417 + 0 NULL GK000017.2:18910927-19170433 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29643 CTGCAGGGTTTTGACCGAGGGTTGGAGTGTAAGAAGGTGGACTCAATTTCAGTGTCACTC Gene BVV0102_097251 + 0 NULL GK000005.2:99036691-99048140 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196034 TCONS_00196035 1 XLOC_118204 Coding TCONS_00196034 XLOC_118204 Coding Coding LOC100849002 5:99042778-99048555 = TSS145944 1100 2 TCONS_00196034_1 68 2 0.809903047091413 0.00174188903029899 0.00219623957110726 0.00135342145098761 0.00132883322686962 0.00133462067489366 0.00143967279518135 0.000506031723518013 0.000761785698733717 3.43181571507034e-09 0.000618391556731746 0.000257915919468472 0.000188132429274128 0.000572255274577425 0.000397327780584137 0.000764240509391678 0.009439226810699 0.000883649443714012 0.00424463516671846 0.00115415812206854 0.0011647038057417 2.43329663708072e-05 0.00126215975576413 0.00303666796350524 0.00314283109828424 0.00224915863931646 0.0017465057066805 0.00188805320143997 0.000528955585637387 0.000273404819468465 0.00214269352763113 XM_003582261.2 LOC100849002 PREDICTED: Bos taurus uncharacterized LOC100849002 (LOC100849002), 0.0 1956 99.91 0.987272727272727 NM_001271592.1 LOC100129361 Homo sapiens chromosome X open reading frame 69-like (LOC100129361), mRNA. 9e-110 401 70.78 0.834545454545455 TCONS_00196034_1 sp|Q96HG1|SIM10_HUMAN SIM10_HUMAN Small integral membrane protein 10; 4e-22 84.3 63.49 0.911764705882353 1 noncoding 0 0 0 0 -1.54614712936246 0.0193926916625437 -0.00371800280902904 0.955202547168051 AGCAGACAGGAAGGGGAGGAGCGCCAGCCGCAGCCCCAGGCTCACCGCCGCTCGGAGAGAAGCGGTGTCTGCGTGAGGCGGGAGTGCTAGCCCGGAGGCCGCTAAGTCCCCGGCCCCTCCAGGTCATCGCCATCAGTTGGGGGTCCGCGGGGTCTGCGGTCACCCTCGGTTCCAGGCACCGCACCGGGCTAGCGGCAACATCGCGTCCATGGCCACCACGGCGGCTCCGTCATCTTTGGCCCTCAGGGCCTCGAGCCCGGCCGCGACCCCCAGTTCGTACGGGGTCTTCTGCAAGGGGCTTTCCCGCACCCTGCTCGCCTTCTTCGAGCTGGCCTGGCAGCTGCGCATGAACTTCCCGTATTTCTACATCGCGGGCTCCGTCGTTCTCAACATCCGCTTGCAGGTACATTTTTAGAGCCCTGGGGATGCCGCCGGCGTTCCGGGCCTGCGTTGTGGCCGACTCCCAGGAGGCGCCGCGGCACCGTGGAGCTTGGGGCGAGCAGTCCCGCTGTCTCGCGAGAGTGCTTGGTCTCCCTCCACCGCTGCGCTCTCGCCTCTCCGCCGTCTGCTCTCCTCCGATCCCCTGAACTGGCACCGAGACCTCCTGAGTGTAGGAAGAGGAAATACGCGATTCCGGGAACCGAGAACTTCAGTTAAAACCCACTACAATATTTAAGAAGCTGTGCATCCTTAAAAACGGGACGAACAGGATGTATTATAACAAGGGAAGGCTGTCAAAACTTTCAGGACAGAAATGTACAAGCTCATGGTCCGTGTTCATAAATAGTAAATTTCGGGAAGATGAGACTGGATTATAAACAGGATCAGTCAGAAGCTGAAGATCTTAAGGATATGCAGTGGAAGGCAAACATCTCTTCATTCCACAACAGAAAACTATGACGATCAGAAACTTTAAGTGAAAAAAAAAAACAACGTTGTAAGAGGAACACATCCTTCAGATAACCAAACAATGTAAAATACTGCAGGGTTTTGACCGAGGGTTGGAGTGTAAGAAGGTGGACTCAATTTCAGTGTCACTCTAATTCGCATTGTGGTTCAGAATCTTGGAGCCAAAAAAAAGGAAATCCAAAAAAAATAGG EMBV3_14539 CACCGTCTTCTGGAACAGTTCAAACCCCAACCAAGCCCATCCACCACCAGGAAGACCGTT Variant GeneID:507319|EFNA1:NM_001034292:108_cdna 195^490 1 EMBV3_09052 GeneID:507319 3 GENE EFNA1 MGC128366 ephrin-A1 EMBV3_11268 AAGTATTGGCTGTCTTGAGGAATGCGGTCGCCCCCTTGGGAAAGTACATATCTGGGAGCA Gene GeneID:100336949|LOC100336949:XM_002690878:299_cdna Constitutive 1 NULL GeneID:100336949 10 GENE LOC100336949 NULL sarcomeric tropomyosin kappa-like EMBV3_18911 CCTGAACCGGGCGGGCTTGCTCCAGGTTTACATCTGACAGCAGAGCCTGGTCCCAACAGA Variant GeneID:515362|EMG1:XM_002687861:96_cdna 484^885 6 EMBV3_41949 GeneID:515362 5 GENE EMG1 MGC138092 EMG1 nucleolar protein homolog (S. cerevisiae) EMBV3_13503 TACAGGATCTGACAGCTGACTGGGAATCAATGAGGTGTGCTTTCAGAGACCTCGGACTGA Gene BVV0102_296808 + 1 EMBV3_40359 GK000027.2:37070243-37164685 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07918 CTCTGCTCAGTGACCCCAGAGTCCTCAGATTCTGCCTTCTCAAACTTGTATAGCATCTCC Gene BVV0101_044399 + 1 EMBV3_38499 GK000001.2:143204867-143211535 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33457 CTGAAAGAGGGCCCAGTAGGAAGAGTGGCAAGGTGAGAAGACATCAGAATGTGCAAGAAC Gene BVV0102_269756 + 1 EMBV3_36465 GK000023.2:14998188-15000259 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134178 TCONS_00134176 TCONS_00134177 TCONS_00134173 TCONS_00134175 TCONS_00134174 1 XLOC_081323 Coding TCONS_00134177 XLOC_081323 Coding Coding C23H6orf130 23:14998263-15006107 j TSS100080 3226 1 TCONS_00134177_2 152 0.0632362058276503 6 0.589442815249267 0.00123320860367467 0.00056787327593117 0.000951634643370175 0.000376935569350757 0.000255508017721622 3.36365742279619e-05 0.000412694523814759 0.000290440989194516 0.000988043009740276 4.45041646295121e-05 3.90141920897847e-05 1.04197787186111e-05 9.63469163571746e-05 0.000492669780827755 0.00020483328623072 6.39701288003847e-05 3.03218571507194e-05 3.39783109500266e-05 0.00084876806761118 0.00103045773286493 0.000270010058777805 0.000165730343196449 0.000228996624357865 1.25976938059396e-05 0.000841826556648722 0.000950373058681857 0.000266686119469679 5.20599023249593e-12 5.52930585974342e-05 4.56738958283286e-05 XM_005223509.1 OARD1 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf130 (OARD1), transcript variant X2, mRNA. 0.0 2221 100.00 0.381277123372598 NM_145063.2 OARD1 Homo sapiens O-acyl-ADP-ribose deacylase 1 (OARD1), mRNA. 0.0 964 80.83 0.311221326720397 TCONS_00134177_2 sp|Q1LZ74|OARD1_BOVIN OARD1_BOVIN O-acetyl-ADP-ribose deacetylase 1; 1e-111 318 100.00 0.993421052631579 1 noncoding 0 0 1 0 0.0711140929583244 0.555651305006017 0.0124787991154583 0.801914478119773 TGCGGCCCCTGAAGACACACCCCTTGGGACTTAATGCGCAGGCGCCGCTCTACCCAACTTGCATTCGGCTGTCTCGTTACGCATGCCCGGGCGGCGGCGGCGGTCGGACTTCACCGCCGGAAGTTCAGCGGCCATCACCAAAGAGTGCAGGTTCGGCTAGCTAGCTAGAGGGGCTCGTTTCCGCCCGGCTCCCGGATGGTGGGCGGCCATCTTAGCTGAAGAAACACTTAAGTTCTGGAAATAGCGACCCAGTATCATGGCTGGCAGCCCTAATGAAGATTCAGAAGGAAGCCGAATTACTTACGTGAAAGGAGACCTATTTGCATGTCCCCAAACAGACTCTTTAGTGCATTGTATCAGTGAGGACTGTCGAATGGGCGCTGGGATAGCTGTCCTCTTCAAGAAGAAATTTGGAGGAGTGCAGGAACTGTTGAATCAACAGAAAAAGTCTGGAGAAGTGGCTGTTCTGAAGAGAGATGGGCGATATATATATTACCTGATTACAAAGAAAAGGGCTTCACACAAGCCAACTTATGAAAACTTACGGAAGAGTTTAGAGGCTATGAAGTCCCATTGTCTGAAGAATGGAGTCACCGACCTTTCCATGCCAAGGATCGGATGTGGTCTTGATCGTCTGCAATGGGAAAATGTATCCGCAATAATTGAGGAGGTCTTTGAGGCAACAGACATCAGAATTACTGTGTACACACTCTGAACAGAAGAGCATTTTGGATGTGTCTACCTTCTGCATCACCTGGGCCACAGGACTGAGCAAACTGACCTTAAAATGGTCAGAGGACCGTTTCTTGTGAAGTAGTCTGTGTTACAGGCCAGACCTGGGTTGCTGTATTCTCAGGATTGAATGGGACTCTGGAGGAGGGGTTTCTTGTTGCTAGGAATTTTTCTTTTTCAGGAAGGTAAGGGGAGGGACCAAATGTTGGGCCTAGGACCCATTTTGCTGGGGATGCCATGTGATTGGTTTGGGTTGCCACTAGGTGGCAGCATTGCTTTTCCCTGCTGTTTTAAGAGAAATTTCTGGAAGGATGACCGTTTTCAGTTAATTTTGCATCTTGTGTCATTTGTGCACTTACTTAGTATTATCCTTATGGCATCAAATTGATCCTAGGAGAGAATCATGGGTTTGGTTTTTGTTTAAATTACCAAAGTTTTATGTTTACAAGGAATTTGTGGTGACAAAAATGGAAAAATAAATATCTTTTTTTGAGCGGGGGTGGAGCTCCAGTGAGGTTCTTTGCACATGTCTGTGTTGTTCTGTGCTTGGCTAATGGAGGATTCACGTGTAACTTAATCTGAAAGAGGGCCCAGTAGGAAGAGTGGCAAGGTGAGAAGACATCAGAATGTGCAAGAACACTGGAAAGGCAGGCTTTTAGAATCTCCTTGTGCTGAACTCTTTCTCTCCTGTCCACCATATAGTTTCTGTGACTAAACCTGTCTGAATTCAGTCATAAAACAGAATAACATATGTGAAATACCTTGCAAAGTTCTTAGTGTGAACTAATGAATGACTCAATCTACAGTTATCAACAAAATCCATACACATCACTTTAAAATAAAGGTCCACTCCCTCTTAAACAGGAATTCTAATTTGGTAGGTAGAGGTGAGGGAGAATGGCCGGTTTTGTGTTTTTGAGCTCCAGAGGATTCTGATGTGTGTCCAGCTAGGATGGAAAAGAGAAAATTTGTTCCCTTCTAAGTTCAGAGCAGCACTATGTCCACTCTTGATTTCCATGGTGGAAGAATAAGGCTCATGGATTTTAGCCAGTGGTTCAGTATCAGGCTTCCCTGGTGGCTCAGAGGTTAAAGCGTCTGCCTGCAATGTGGGAGACCTGGGTTCGATCTCTGGGTCGGGAACATCCCTTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCTTGGACGGAGGAGCCTGGTGGGCTACAGTCCACGGGGTTGCAAAGAGTCGGACACGACTGAGTGACTTCACTTGCAGTATCAGAGGTGTGGGGAAACAAGGAGACTATTTCCACCCTCTGTTCTCTTACTGTGGTATTGAGATCAGACAGGCCTATTGATTTTCTTCATAGAATGAATTCTTGGTCTGTCAGAGGACTTGATGCTTTCCCAATTGTAAAAGAACCGGATTTTAGAAGGGGCTTGTTGAAACACCAGGAGAGCACTGGTTAAATGTAATCTTTGTACTTTAGACTTGTGTTGTTATTGCGTGGCAGCCTGATATGAGGCAGCAGTTTCAAAAAGTATTTGACTTCTTCTGTATCTCTGTGTAACAGATAAGTTCTCTATGTTGTTGGGGTAGGGGCAGTGCTGGGAGCAAGTTCACTGTCAAACTTTTAGACTAAGGTTTTTCTTGAAGCTTTGTTTCTGTCCACAGACACACAGTGAGGTTGAAAGGGAAGAAAATGTACAAAAAAGGAGAGTGGGGTGGTAAGAGGAAACTTAGAATTAAAGTATTTTGCTTAACTCTGCAAATAAATGTTATCACTGGGTCGAAACATTGGTTTTCTAGGATTAGGGTTAATTTGTTTCATGGAGTATGAGCCTCGTTCACATTTCTCTTAACAAAACCTAGTCTTGTGAAGGTCTGGCTGTAAGTGGAATTCCGCAGGGATGTGATAAAGTGCCCTGTCATTTGCAGATAGTCTTGGGGTCAGATTCCAATGACTTATCACACTTGAAGCCTGGGGAAAGGAGGTATGACCTGATAATCAGAATGGACACATTATTCCTGGAAACCTAGTTAGAGTTTGGCAAACACCCAGAAATTCACATGTGAAATTTTGCTTTTACATAGGACTCAGACAAGAAATGAGACTTCAGACACCATCCTGCCCTCGCCATCAAGTATGACGCACAGACTATCCCTACATTATGTGTATCCAAACATTTAAATCCTACTTCTCGCCCTTTCCTCTTTAATCAAGGAGCTAATTGCTTATGGATTGGCAATTGGGATGTTTATATTCCTTAGGAACAGGTTTCCTGTGCCTTTTGTTTCATCCTCTGCCATACTCCTTGTTTTCAGAGGAGAGAAAAGCCACTCATTTAGAAGTAATCTTGAGACAGTATTTTCTGAAGGTCAAGACAAATGTGTGAAGTCTGCATGGGAGTTGGTACATTCTGTGTAGCCCTGGCAAGTTCTGGTTTAAGCCTTTCTTCCACTTTATAAAACGTGGCTTGGTTCATAACCTGGGAC EMBV3_03873 AGCAAAGTCTTCTCTACCTGCTCAGCCCACTTGACTGTGGTGATAATATTCTACGGAACC Gene GeneID:513099|LOC513099:XM_002689879:14_cdna Constitutive 0 NULL GeneID:513099 8 GENE LOC513099 NULL similar to Olfactory receptor 13C2 (Olfactory receptor OR9-12) EMBV3_43586 ACCAACCATTACCTTGTTGCTGGAGGAGTGCACAGAAAAGCTGAATCTGAACACGGCTGC Gene GeneID:616832|DCDC1:NM_001076434:62_cdna Constitutive 1 NULL GeneID:616832 15 GENE DCDC1 MGC133856 doublecortin domain containing 1 EMBV3_15976 GTCAGAGGATGAAAGTGGTCCATCATCAGTGGTCACGAGGATACTTAAATTTCAGCATGC Gene GeneID:514487|STX19:NM_001075672:90_cdna Constitutive 0 NULL GeneID:514487 1 GENE STX19 MGC142630 syntaxin 19 EMBV3_41468 ACAGCTACCTGCAGATTTCTACAGGACTCTGAAAAGAACAAACCTTCGCAGGCGCAAGGT Gene BVT0101_071941 - 1 EMBV3_07979 GK000030.2:50531697-50551257 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22291 CCGAATCCACACAGATACAGCCTCAACCTGAACAGCGATTTCTTTCGAGAGCTCGTGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09055 GGTCTTCACTTTGTGCTACAGGGATCAGAGGTCTAAATGTAGGTGCGGTGATCATACGGC Gene GeneID:515416|GLRXL:NM_001037604:8_cdna UTR3_Alt 1 NULL GeneID:515416 7 GENE GLRXL GLRX MGC133817 glutaredoxin (thioltransferase)-like EMBV3_20576 CGTACGGAAGCACATTAAAAGTCACATGAAGATGAATTACCAGGGAGCCTGGCGCTCTCC Gene GeneID:616986|REV1:XR_082702:250_cdna Constitutive 0 NULL GeneID:616986 11 GENE REV1 NULL REV1 homolog (S. cerevisiae) EMBV3_03338 CTGCATTTGAAAACAGAAAGACCCCACAAGGGTAGAGCACAGATTCAAGCCTCCATTTGC Gene BVV0102_048013 + 0 NULL GK000008.2:110997986-111715151 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03424 CCGAACTGTTGTCTCCACTGGACGAGTCCCGCGCCAGCATCACCTCAGTCACTAGCTTCT Gene GeneID:507825|LOC507825:XM_002688835:141_cdna Constitutive 0 NULL GeneID:507825 7 GENE LOC507825 NULL hypothetical LOC507825 EMBV3_12744 GGTCCTGTTCGTGTCTGTGTCCTGCTTCATAGTCTCCACTCTCCTGCTCTTCCTCTACAT Gene GeneID:617833|LOC617833:XM_002691127:116_cdna Constitutive 0 NULL GeneID:617833 11 GENE LOC617833 NULL similar to VIP17/MAL proteolipid EMBV3_03839 CCAGGACAGGTCACCGACAGCAATGACCGCCTCTAATGAACACCGTCATGCCTTCAAGTT Gene BVT0102_224172 + 0 NULL GK000012.2:21316173-21373521 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05778 CTGTAGTATTTGAGATTGCACCTAAGTACTGTGCAAAGCTAGTGGACATGATGGAATTCC Gene BVV0102_102640 + 0 NULL GK000006.2:324039-1462195 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12011 GTGCTACGACAGGCTGTCTGTTCACCCCCGAACCCATACTTAATTACGTCAAACCAAGAA Gene GeneID:538796|CCNL2:XM_002694131:491_cdna Constitutive 1 NULL GeneID:538796 16 GENE CCNL2 MGC128891 cyclin L2 EMBV3_24171 CTGATGTGCTTATTATGTAATGTGCTATCCCAGCTACCCAGTTTTCCATGTAGGGTTGGC Gene GeneID:541186|GOPC:XM_002690092:70_cdna UTR3_Alt 2 NULL GeneID:541186 9 GENE GOPC NULL golgi associated PDZ and coiled-coil motif containing EMBV3_14350 TACATGAAACCCAAGAGCAAGGAGGCCCGTATCTCTGACGAGGTCTTCACGGTCCTCTAT Gene GeneID:784434|LOC784434:XM_002689683:108_cdna Constitutive 0 NULL GeneID:784434 8 GENE LOC784434 NULL similar to olfactory receptor Olr834 EMBV3_43411 ACTGTTGCAGCAGCTGCAGCTGCAGCCACAGCCTGTTTCCCGTAAGGCTGTACATAGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41462 GAATGGCTGGGGCACAACCATTCTTAGCAGGAAAGACATGGACCAATTTGTAGAAAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01293 TCCCAATCCAACTCTCTCCAACCACTCTCCGTCTTGGCAACCACTAGTCAATACTCTGCG Gene BVV0102_024001 - 1 EMBV3_11377 GK000011.2:98478916-98498170 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02294 GAGCCTCAGTCCGTAATTAACCAGGTCTCCACCAGGGTTTTCTTTCTATGTGTTTTCTTC Gene GeneID:537167|H2AFY2:NM_001076086:377_cdna Constitutive 0 NULL GeneID:537167 28 GENE H2AFY2 MGC139428 H2A histone family, member Y2 EMBV3_27012 TTTCTTGATGAGGAATCAAAACCCAGGCCCACAGTAGTGAAAGCACTGAGTCCTAACCAC Gene BVT0102_058711 + 1 EMBV3_10821 GK000001.2:121435259-121864959 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38642 CCCAACTTAATCTCTAGACCTGGTAGAGTTCCAAACATTTAACAGGAATTTTCTAGGATC Gene GeneID:786874|ZNF568:XM_002694954:89_cdna Constitutive 2 NULL GeneID:786874 18 GENE ZNF568 ZNF793 zinc finger protein 568 EMBV3_00846 TCATGGAAGACACTTCCGGAGATAACCTTCAACATTTCCAGTGGAGGATCCAGTCCCTGC Gene BVT0102_343465 + 1 EMBV3_33124 GK000010.2:93965131-94557842 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015459 TCONS_00015435 1 XLOC_008488 NonCoding TCONS_00015459 XLOC_008488 NonCoding NonCoding - 10:94334367-94341909 - TSS10902 1030 1 TCONS_00015459_1 97 0.102912621359223 2 0.863678557220528 0.0001343161179933 8.36558082099789e-05 3.86059672585779e-23 4.1833906785862e-05 7.05366393170008e-05 1.48661066440759e-05 2.7234319876031e-05 1.933703341278e-05 0 0.000299565886618603 6.29964993516134e-06 0 5.97419357712463e-06 0.000479358677513518 0.000129504277150277 0 0.000103134549967579 0 7.23110456517044e-06 0 0.000163105914700744 0 0 0 6.01595008542565e-06 0.000281572203522209 1.20977237088987e-05 0 2.58815896768558e-14 8.40643984519656e-41 XR_232768.1 LOC101906873 PREDICTED: Bos taurus uncharacterized LOC101906873 (LOC101906873), 4e-06 57.2 72.55 0.0951456310679612 0 noncoding 1 1 1 1 -0.173171798094209 0.232213615604215 -0.0149756990316974 0.749916859298778 GCAGAAGCCTAGCTGTTTGGCACTGGGAACCCTGGTCTGAAGCACCGAGTTCAAGGCCTCTGCCTGCTGCACCCTACGAGCAGGTGAAACTAGACTGAGCTCCAAGGAAAACTAAAGACAGGACTTGACAAGTCATCTGTTCATGGAAGACACTTCCGGAGATAACCTTCAACATTTCCAGTGGAGGATCCAGTCCCTGCAGGAAGTGCCTTGCAGAACCTCGGCATGCTTATTAAAGAGCAAATGTTCTGAGAGAGCAGGAAATGGCTTCTCTCTCCTTTTCCAGTCATGTGTACCCTCTGGGGCACACCTGCTCCACTCCCATGCCGCCTGTTGCTTCTGTGGGGTTGACAGTGGTGGGGGTGGTGTGCAGAGTTTTATTTACTTTGTTACATTATTTACGTTTTCGGATTATTCCTGGGATGAATTGCTATGAAGCCCACATTTACTTAGCATAAACTTCGGTAACAGCTTAATAGAAATTAAATTTCAAGTCATCTCTCTTTGAGAAATATTAGGATTTATTAGTGGGTCCCCCCAAAAACTAATTCATCTGCATGGATACATTTCAGCCTTAAGTAATGGAGGAAACTTTGTGTGCTATTGTCTGTAATTATATTCAGCACATTCCCTTCTTCCCCTCTCCCCTTTCTGTATCCTCTGATGATTAGCCTGGTGGGAGAAGCCTTGTCTTTGCCCAAGGCCTTAGGAAAGCAGTAATGGTCCCCAAGAGAGAAATTGGCTGTACTGAGAGATAAAGGAGGGAAAGGAGGAAGAGAGTGAAAATAAGGAAATGGTCAGGTCACAGCCCATGACTTATAAAAACATGTTGAAGCGAAAAGAAATGAACATGTTAAATCTAAGAAGTATGAAATGGCTTTCTCATGAATCTCTAAATGGCTGAAAGAAACCGCACAGTAGTTAAGCATCCCTGCTTGTGCTGTGGGCCAGGAAAAAGACGGTGCGTGCTCTGTGCTGTGGCCAAATCAGTCTCCTAGAAGAACAGCTTGATCATGTCATTCCTGTGCTC TCONS_00018491 TCONS_00018492 TCONS_00018493 r 5' 369232 TCONS_00018491 TCONS_00018492 TCONS_00018493 r 5' 369232 EMBV3_08321 GAAAAGGAGTCAGGAATGGCTATTTCTCAGGAACAGTTGACCTTCAAGGATGTTGCTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26625 ACTGCACATTTCTGTATAGAGCCGAAGAGCCTCAGGAAACCCCCAGAAGAAAGACGACTC Gene GeneID:767955|GML:NM_001077025:143_cdna Constitutive 1 NULL GeneID:767955 14 GENE GML MGC134423 glycosylphosphatidylinositol anchored molecule like protein EMBV3_33975 CCAATCAAAGACTGGGCTCACAAGAGGGAGAAAATCTGGGACATGTTGGCTTCCCTTAGG Gene GeneID:614130|BAALC:NM_001083508:53_cdna UTR3_Alt 1 NULL GeneID:614130 14 GENE BAALC MGC142796 brain and acute leukemia, cytoplasmic EMBV3_30998 CAGCCTGTACTCCACAGAAAGAGAAGTCACCGCAACGAGAAGCCCTTGCACAGCAACAAA Gene GeneID:536852|LYG2:NM_001099076:80_cdna UTR3_Alt 2 NULL GeneID:536852 11 GENE LYG2 MGC151738 lysozyme G-like 2 EMBV3_35586 GGGTTGTCTGTTTAGATCTTTAACGGGTATTTAGAGGGTTAGGTTGCTTGATTCCTTCCC Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_30247 GATCAGCAAGCAGGAACATGAAGAGCCCGTCCCCTCCAGCGTCCACCACAAATGTTTCTA Gene GeneID:100295295|LOC100295295:XM_002696410:13_cdna Constitutive 0 NULL GeneID:100295295 20 GENE LOC100295295 NULL similar to alpha 2 actin EMBV3_18341 GCCATGCTGTAAGCTGTAACACTTGAAAAAAGTGCTTTTTATATCAGTGACTTTATATAG Gene GeneID:525628|DIAPH3:XM_002691734:32_cdna Constitutive 2 NULL GeneID:525628 12 GENE DIAPH3 NULL diaphanous homolog 3 (Drosophila) EMBV3_28412 TTCACCTGGCACAACGGCAAGCAGTTCACCACCCTGGACAGAGACCACGATGTCTACACA Gene GeneID:512019|ANGPTL2:NM_001109814:70_cdna UTR3_Alt 2 NULL GeneID:512019 11 GENE ANGPTL2 NULL angiopoietin-like 2 EMBV3_26150 ACGGCGAGACGAGCTGCCCGAGGTAAATGACCTGACTCTGGACGGAAATCCCTTTCTGGA Gene GeneID:281048|CD14:NM_174008:199_cdna Constitutive 0 NULL GeneID:281048 7 GENE CD14 NULL CD14 molecule EMBV3_17235 CCTCCTCTTGCAGCAACTAGAGAAAGGCCCAAGCTGCCACGAAGACCCAGCACAACCAAA Gene BVV0102_132711 + 0 NULL GK000013.2:62550906-62637792 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045884 1 XLOC_026561 NonCoding TCONS_00045884 XLOC_026561 NonCoding NonCoding - 13:62600374-62605868 - TSS33397 674 1 TCONS_00045884_1 107 0.79080118694362 2 0.877662479519388 0.000318153684282716 0.00021386455233851 0.00102288166449897 0.000344978973386987 5.86015228561019e-05 6.93703402291295e-12 7.7871478342544e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000174156870126532 0 0 0 0.000112168864057728 0.000519866758376018 0 0 0 0 XM_005215584.1 SYBU PREDICTED: Bos taurus syntabulin (syntaxin-interacting) (SYBU), 4e-61 239 76.18 0.48813056379822 NM_080725.2 SRXN1 Homo sapiens sulfiredoxin 1 (SRXN1), mRNA. 1e-11 75.2 70.55 0.238872403560831 0 noncoding CTGAAAACAAGTAGTCAATAAAGGGAAAGTAGAATTTCATCTGAATTAAATCTGCAGTTTAGTTAATGGTAATACACTGGTGTTAATTTCTTCGTTTTGACAGAGGTACCGCCATTAGGTAATGAGCTGACATTAGGAAAACTGGGTGAAGGATACACAGGAACCCTCTGTACTGTCTTTGCAACTTTCATGTGAATTTAAAACTAGTCCCTAAAAAGAACTTATTCAAAAATACAATTTGGGGGCTTCCCTGGTGTCTCGGTGATAAAGAATCCGCCTGACAATGCAGGAGACACCGGTTTGATGCCTGATCTGGGAAGATCCCACATGCCATGGAGCAACTAAGCCTGTATGCCACAACTATTGAGCCTGTGTTCTAGAGCCCAGGAACTGCAGCTACTGAGCCTGTGTGCTTCAACTGCCGAAGCCCACACCTCCAAGAGCCCAAGCTCCACAAGAGAAGACACTGCAATGAGAAGCCTGTGCACCGCAACTGGAGAGCAGCCTCCTCTTGCAGCAACTAGAGAAAAGCCCAAGCTGCCACGAAGACCCAGCACAACCAAAATTAAAAAAAGAAACAAACATTGTGGGGCAATGAAGATAAGGACTGTTGTCGTCTTCACTGGCTTCCTCGAGGGTAAACCAAGGCACAGAGAGACAAGTCCTGGTCCAGG TCONS_00043426 r 5' 37342 TCONS_00043426 r 5' 31925 EMBV3_06896 AGTGGGTGGTATACGCCATCCGAAACCTCACGGAAGACAACAGCCAAAACCAAGACCTGA Gene GeneID:767990|ATXN10:NM_001077051:15_cdna Constitutive 2 NULL GeneID:767990 5 GENE ATXN10 MGC133945 ataxin 10 EMBV3_39502 TTGTGGCCGGCTTCTCCTCGGGCTTCATGGTGCTGTTGGACACCCGTACAGGCCTAGTTC Gene GeneID:514104|WDR81:NM_001105366:112_cdna UTR3_Alt 2 NULL GeneID:514104 19 GENE WDR81 MGC166345 WD repeat domain 81 EMBV3_26608 CTCAGTAGACACAGGGCCCACACCTTGCATACTCCCCTCCAACCTTAAAGTGAGAAAACT Gene GeneID:100294865|LOC100294865:XM_002696950:78_cdna Constitutive 0 NULL GeneID:100294865 22 GENE LOC100294865 NULL hypothetical protein LOC100294865 EMBV3_26340 GAATACTTTAAAAAATGTAGAAAGCATAGGCTGATATCCTTAGTATTGCTATGTATGAAG Gene GeneID:615135|IPMK:NM_001035462:100_cdna Constitutive 2 NULL GeneID:615135 26 GENE IPMK MGC127168 inositol polyphosphate multikinase EMBV3_00327 CAGAGTCTGCCAGAGGCTTGTCCTCTGCTGTTGGATATCCGGCTTGTTGATCATATTACC Gene GeneID:782430|LOC782430:XM_002687439:218_cdna Constitutive 0 NULL GeneID:782430 5 GENE LOC782430 NULL similar to olfactory receptor MOR114-8 EMBV3_24143 CTGTAGTGACAAATGGCTTCATGCTGTGTGATTAAATGCATATTAGCGTTTGCCCTAGGC Gene BVT0101_021795 + 0 NULL GK000015.2:64127768-64311997 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18255 GATGGCAGAGGTGGAGGAAACCCTAAAGAGGATCCAGAGCCATAAAGGGGTTATAGGAAC Gene GeneID:768062|DYNLRB2:NM_001077119:80_cdna Constitutive 1 NULL GeneID:768062 18 GENE DYNLRB2 MGC133479 dynein, light chain, roadblock-type 2 EMBV3_16359 TCCATCCTCCTCCACAGTGAGTGGGTTTCCAGTTGTGGAACAAGTTAGAGGGGAGTGCAA Gene BVT0102_179870 + 0 NULL GK000002.2:118729376-118773129 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30492 GGGCTTTCTTATGATGAAGAACATCATGCCTGGTTGTGGGAGGACAATTCTACTCTCTCC Gene GeneID:444877|KLRD1:NM_001002890:22_cdna Constitutive 0 NULL GeneID:444877 5 GENE KLRD1 CD94 killer cell lectin-like receptor subfamily D, member 1 EMBV3_26852 GATGGACCACTTCACAAATGGTTACAAAGTCATACCCACTTCTTCCACAATGACCACAGC Gene GeneID:100139803|TMEFF1:XM_002689867:5_cdna Constitutive 0 NULL GeneID:100139803 8 GENE TMEFF1 NULL transmembrane protein with EGF-like and two follistatin-like domains 1 EMBV3_38316 GCCCTCAAGTAAGAGGCCCTACACACATCTCGACCCTTAGATCGGGGATAATGATGGAGT Gene GeneID:783116|MGC160048:NM_001099188:17_cdna Constitutive 0 NULL GeneID:783116 X GENE MGC160048 NULL Uncharacterized protein ENSP00000360166 homolog EMBV3_13099 TCCCTTTTACCCAGTACGCTACACTGCCTGCCTTTCATGAAGGATAATAGGACATATTTC Gene BVT0102_075959 + 0 NULL GK000024.2:25496402-25568788 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141934 1 XLOC_086361 NonCoding TCONS_00141934 XLOC_086361 NonCoding NonCoding - 24:25556704-25557809 - TSS106145 1105 1 TCONS_00141934_1 148 0.89683257918552 1 0 6.15642808289794e-06 0 0 0 0.000215024836341911 0 2.63878390456114e-06 0 6.49127450006634e-07 0 1.86449575209609e-05 0 0 0 8.88001831802308e-06 0.000406332290037478 0 2.27067205019686e-05 0 0 1.37363519835202e-06 0 0 0.000257917512761066 0 0 5.30239270296611e-07 8.69246961860359e-06 0 0 NM_001104968.1 ZNF266 Bos taurus zinc finger protein 266 (ZNF266), mRNA. 1e-63 248 92.44 0.153846153846154 0 noncoding 0 0 0 0 NA NA NA NA CTGTTATGAACATTCAGGTGCAAATTTTTGTGTGGACACGTTTTCATTTCTCTTAGGAGTGAAACTGCTGCACCATATGGTAACTCCATGTTTAACATATAGTTAAACATAGGAAAACAGCTTGCCTTCCAAACCAGCTGCACCACTTTACATGCCCACCAGTGGCACATGAAGCTTCAAATTTCTCTACATTCTTGTCACATTTGTCATTGTCTTTTGGATTATAGCCATTCAGTGGGTGTGAAGTGGTATTTTATTACGGCTTTGATTTTCATTTCCATGTTGGTTAATAATGGCAAACACCTTTTCATGTGCTTACTGCCTATTTGTGTGTATATATATATATATATATATTTTTTTTTTTTTTTTTTGAGAACCGTCTATATCCTTTGCTCATTTTTTAAACCTTTGAGAATACGTAAATGTATACTGGTCATCCAAATTTCCTCTTTTGTGAATTTCTGTAACTTGCATAGTATTGTGTTGCAGTCTGGCACTTATACAGTATCAATTGTATTATTGCTTTTTTCCTTATTAACTATAGGAGCTCTTTACGGTAGATATGTTTCTTTGTACATTTGTAGCTTGAATTTTCACTACTTTGTGACCTCCTGATAAAAGAAAACCTTAAATTTAATATTTTCTGTTCAATTATCAATCTTTTCTGTTACGGTTTGCAATTTTTGCATCTTGTTTAAGAAATATGTCCTATTATCCTTCATGAAAGGCAGGCAGTGTAGCGTACTGGGTAAAAGGGACACTCAGGATTTCCCTTGTAGTCCAGTGGCTAAGACTCCCACCTCCCAATACAGGGGGGTCCAGGTTTGATCCCTGGTCAGGAAACCAGATCCCACATGCTACAACTAAGACCTGGCACAGCCAAATAATTAATTAAAAATAAATAAATAAATAAAATGGAAACTCAAGACGCAACTTTAGTCAGTTCAGTTGCTCAGTCTTGTCCGACTCTTTGAGACCCCATGAACTGCAGCACACCAGGCCTCCCTGTCCGTCACCAACTCCCGGAGTTCACTCAACCCCATGTCCATTGAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGC TCONS_00138678 TCONS_00138679 TCONS_00138680 TCONS_00138681 TCONS_00138682 TCONS_00138683 TCONS_00138684 . 5' 10220 TCONS_00138678 TCONS_00138679 TCONS_00138680 TCONS_00138681 TCONS_00138682 TCONS_00138683 TCONS_00138684 . 5' 10220 EMBV3_18073 TCCTCCCAGATAGAGTGAGTGCTCCCAGGTAAAGCGAGTCATCCTAGGTAGACAGAGTCC Gene BVV0102_153635 + 1 EMBV3_30868 GK000003.2:120199805-120269770 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05422 CCTCCTGGGAGGAAGGTCAGATTAGGAAGTGTTTTAGGTCTCTTCATTCTGAAGCAGCTA Gene GeneID:616804|CTSO:XM_002694425:126_cdna Constitutive 0 NULL GeneID:616804 17 GENE CTSO CTSK similar to Cathepsin O EMBV3_42115 ATTGCCTGAGTTGCTGCTTTTCCCCATTGCTCACTGCATGTTCTTCCCCACAAGCTTAGG Gene BVT0102_323800 + 0 NULL GK000008.2:59676239-59688147 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225469 TCONS_00225466 TCONS_00225467 1 XLOC_137753 Coding TCONS_00225467 XLOC_137753 Coding Coding KIAA1045 8:59656777-59680779 j TSS168792 5735 1 TCONS_00225467_3 286 0.0434176111595466 8 0.761384942294071 0.000149446301273314 0.000305278712497163 0.000556594606712281 0.000303764728352461 0.000152388673673665 0.000117228750424934 5.84547578595491e-05 0.000538811250548922 2.04603820765743e-05 0.000991996253927916 3.90351863423377e-05 0.00065720101630281 1.22110071462256e-09 0.000137869432779651 5.10900878831871e-09 0.000267560101960721 6.73565835422042e-09 2.1700007327319e-05 0.000269695845032379 2.94227303600129e-08 2.18217698509969e-07 3.17268377846687e-09 3.51771139049911e-05 2.47236848204906e-09 7.51475975931795e-06 2.4493731760385e-07 1.79721393005608e-08 5.46478007317841e-05 5.51689342967285e-05 0.000136786421364327 XM_005210131.1 KIAA1045 PREDICTED: Bos taurus KIAA1045 ortholog (KIAA1045), transcript 0.0 9851 100.00 0.952223190932868 NM_015297.1 KIAA1045 Homo sapiens KIAA1045 (KIAA1045), mRNA. 0.0 2468 76.34 0.595292066259808 TCONS_00225467_3 sp|Q9UPV7|K1045_HUMAN K1045_HUMAN Protein KIAA1045; 4e-177 499 93.07 0.954545454545455 0 coding 0 0 0 0 -0.161841332650099 0.287409213555076 -0.0360406764301015 0.594217784817869 GCCGCCTCAGCCGCCTCAGCCTGCTGCTCCGCCCGCGCTGCCGGCTCCGGGCGCTCGGTCCCATCACGCCGGCTTCCGAGCGGCCATGGGCGACGCGGGGCCCGCGGTGTAGAGTCCGCCAGCCCCGGACCCGTGTCCCGCACCCACAAGGTCTCGAGCCATGGGGGTGTTGATGTCCAAGCGGCAGACGGTAGAACAGGTGCAGAAGGTGAGCCTGGCTGTGTCTGCCTTCAAGGATGGGCTGCGGGACAGGCCTTCCATCCGACGCACAGGTTGTTAATGATGAGATGTGTGATGTCTGTGAAGTCTGGACGGCCGAAAGTCTCTTCCCGTGCAGGGTCTGCACCAGGGTTTTCCATGATGGCTGCCTACGCCGCATGGGCTACATCCAGGGAGACAGTGCCGCAGAAGTGACCGAAACGGCCCACACGGAAACAGGCTGGAGCTGCCACTACTGTGACAATCTCAACTTGCTGCTAACTGAGGAGGAAATGTACAGCCTCACAGAGACCTTTCAGCAGTGTAAAGTTATCCCTGACTGCTCCCTGACGCTGGAGGACTTCCTACGCTACCGCCACCAAACAGCAAAGAGAGGGAACAGTGACAGAGCTCTCAGTGAGGAACAAGAGGAGCAGGCAGCCCGCCAGTTTGCAGCCCTGGACCCTGAACACCGAGGACATGTCGAGTGGCCTGATTTTTTGTCCCACGAGTCCCTCCTGCTTCTACAGCAGTTGCGTCCCCAGAACTCTCTGTTAAGGCTTCTAACAGTCAAGGAGCGGGAGCGAGCCCGAGCCACCTTCCTGGCCCGGGGCAGCGGGAGCACGATCAGCGAGGCTGAATGCCACCGTGCCCAGCACTCTTGGTTCTGCAAACGCCCCATTGAGGCTCCTTCCTGCAGTGTCAGTGTCAGCCATGTGGGTCCCATAGCAGACAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGGCCCCACTGCCCACAGAGCCTGAGTCCAGATTCGTGGATTGGCCTACCTTCCTGCAGGAGAGTGTCATCTACATCTTGGCTGCTCGCCCCAACAGTTTGGCCATTCACCTGAAACCCCCAGGATAGCATGGAGCAGAAAAGCTCAGTTTGGGGACAGTGGCATTCTCTCCCTCCTTTCATTTCTCCCTTTCCCCACTAACCTCTGGTACTGAGACTTCTGGGGGTGGAGCACTGTCCACATCTCAGTTTATCACTAAGCTTTATGGCACTGAAGTCACCATTTCCCTCACAACAGAGGTGGTCAATGCATTGCCACATGGAGAAGCCCTGGGAGCTTTGGCAGCATCTGCTGCAGGACCACCCCCTGCCCTCACACTACAGACTGGACCTGCCACTGCGTACGTATGTGTGCCCACACATGCACACACAAACACACACACCTAGCTGTCCATACCATCAGAGACCTGAGACTTCTTTTTTTTTGAAGAAAGACCAAAGTTCTTTTGTGAAGCCCCTGGTATAGATTGGGGGGGGGGGGTCTCTCTTTTGGCCAGTTTTCATTTACAGTAGATCAGTCTCTGGCCAAGTGATTCTTAATAAGGGGGCATATCAGACTCACATACTCTGCTAGAGATGCTGACAGACTCCCTCTTCCCACACTGAAAATCCCTTCTGTGATGAACCACTGTTCTAATAGGTGTGTGCTATGTCCCTTGGATGTGTTGGGGTGGGGAAAATGGTTGAAGACCACCACTGCACTTATTATTTATTTATTATTTATTTAAATTCCAATTCCTGGTGACAGAGAAGGCAGCTAATCTGTGGAGTGCCAGTTAGAAAAGGGGGAGGCAGCCCCTCCCAGGGACCCAGAAATCTAGGACCCTCTCATCCAGGTCATTTAAGTCCAAAAGTCTTTATTTAGCAGACCAGTCCAAACCCAAGGTGAGCCATCCTGACCCCTGTTTTTTAGGGGGGTGCTCATGGCCAAGAACCCAAGGCCTAAATGGAACAGGTATGATGGCAGTAGTCACAGCCTTCTGGGTTAGGTGCTTCACCCAAGTCAGCTACCACAGAGACCCAAAGCCTGAGCTCCAGTGAGGGCAGGCCTGGATGAAAGAGGAAAGAAGGCTCATTTTTTTCCATTCTTTAGCTTAACTGCAGACATAGAAAAGTGTGCCATGGTATGGCATACAGAACCCTAAACAGGAACTCCTTTCAAACCACATGACAATGAGCATAAGAGGCTGAAGCTAAGATGATTTGAAGATCTCAGCTCTCTTGAACAGAGAAAGTCTCAGCAAAGCCTCACAGAAGGAGGAGGTGTTCCCTTCTCCCTGTTACTAAGATATTGCCTGAGTTGCTGCTTTTCCCCATTGCTCACTGCATGTTCTTCCCCACAAGCTTAGGGCCTAGACCTGGCAAGGGAGGACTTTGGAGGCAAAAAGATGCTACCACAAGGCCACCAGCCTGGCCTCTCAGCCCCAGCTGTTCTTCCTAAGTTCTTATCAAGTTCTCCAGTCAGCATATGCTATGGGTAAGCATAGGTCCTGAAGTTCAAGTTTCTGTTTCTAACCTCATGACTTAGGTTTAGCAAGGTCTGACTTGGTACCAGGAGTTATTCGAGAGGGGCTTGTCTCAGTCACAAATAAACTAACACATCCCCATTCCTTTAGGCACTTCTACAGAAGTCAGCATACAACTAAGTGTTGCTCAGGGGATAGCGGGGAGCTGTAACTTGGGGCATGGCAAGGGCACTATATGGTCTCCTCCTGTAGAGACAGCGTGACCTGAAAGTCAAGTAAGAAGCTTCTGGGGTTGGATTATTTAAGACTGAAAAGAAGCAGACAGAAGATGAACTGGGTTCATGTGTATGGCTCCGTTCTTTGTAAATACTCCATAGCCACACTCCCAAAACTAATCAGTAGGAGGGGCCATTATTTAGTCCAGCCAAAAAAAGAGAAAGCACATGACTCTTGGGCCCAAGGACTGCATCTGAAGCAGCCCATCCTGGGGTTCTGCACTGAGAAGATTAAACCATATTAAGCACAAGGGCTCTTGCTTACTCTCCTGGCAAATCACCTTTTATGTCAATGGCCTTGGGCTGCTTGATCTCAGGACAAGGCATTTTGAGTAAAAGCAAAGTCTAGGCTTTGAGAGCTGAACAGCTTTTTTCTCCTGCCTCATTGTCAGTCACAAGGATTGGAAGTCCATCTTCTTGTTCCCTGATCTTTCACAGACCAGGGTGATGCCTACCTCTGGAGCAGCAGCTTCTAGCTTTCTGTGGGTGAGTGTAAAGACTGGAGGCCACTAGAGCAGGCCAACTGTATCTCAGGGCCTGGCAAAACAGGCCCCAGGGTTCTTCCACAGTAGGATCTGACCCATTTGGGACCACCCCTCCCTATTTTGGGACAGCAAGCTTCCTTGGTGGGGACATGCTGCAAAGGGCCCAGAAGAGACACTGTCCTCATGAAAGGGTGGAGTGCCAAGTCACAGGAGTCCTAGGAAGCAGAAAAGGACGGAAAAGCAAGCAGTCTCTTCTCCATAGGCATCTAACTTTTTACCAAAGGAGAGAGGAGAGGTTCCATTGCTCCCTAAGTTAAGAGTTATAGAAGCTCTGTCCCAACCCGCCTTTCTGAGGCTTCCCCTTGCAGTGTCCTAATCCACAGGGCCTCTCTCCAGGATGTATAGAGACATTCAAACTTTTATAAACCTCAGTTCAGTTCAGTCACTCAGTCATGTTTGACTGTTTGCGACCCCATGAACCGCAGCACGCCAGGCTTCCCTGTCCATCACCAACTCCCGGAGTTCCACCCAAACCCAAACCTAGTGAAGCTCATTTCCTTTCCTTTTCAAGCCCTTTCATCATTGTGACTGAAATTCTGCCAAGTACAGAAATTAGTGTTTGACTGTAATAGGAGTATGAGAAAATGTTTCCATCTTAGCTACCCAAAATTGCAGAGATCAGTTCTTTTCCCAGTCACCCCCAACTGCACCACCACCCCCAATCAAGGGAGGCTGAGGTTACACAGATGCTCCTCTGAAGACTACTTGTCCTCAGTCTGTTTTTAACCCACAGTCCTCTTCTCCATGCTCAGATATAAAGGCAGGGACGTCTGGATGATGCAGTGGAGCTTTGGGACTGAGAGTCAGCTGAGGCAATAGCTGTGGCCACATAGCCTCCTCAGATTTGTCCCGTGGCTTCCTCTCATGAGATCAGCCTTTGCCAGTAGATGGAGGCTGTACGCTTTTGAGCAACAGGCCCCTTTGATCCCAGGGATAGAGCGGTTTCCTCGCTCATAGATACTGATCCATTTCAAGAGCTCTTCCTTAGAGGATAGCCATGGCTGAAGCCACAAGCATGTTGCCTCTTTTTGTCCTCAGCCTAAGTAAGTGTGACTGCAGGCCAGATACTGGCCTTTCTGGCCCTGGTGCTCCCTATGGGATGTCACCCTGGCCTTGTTAGCGTGACCAAATATGGGGGTCCCCCATTCCTGTCAACAATATGGGAAGCACAGAATCAAACCACCTGGGAAGAGAGCACCTCCCTGGGTATTGGGTTCAGGATTGTGCCTAGGCTGCTAAGCCTCAACCTCAACCATTGCAGGTCTCATGGCTTCAGTAAAAGTGGTGCCAAGAAGCCTAAAGGCAAGAGAGAAGCTCAAAAGAAGCTGTCTGGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGAGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAATCAGACACAACTGAAGCGAAAAACAATTTAAAAAAAAAAAAAGAAGAAGAAGCTGTCTGGTAGGGCCCCAGGCCAGCCATGAATACCACAAAGCCAAGAGGAACCTCAGGGCAGGACTGATAGCAGGCTCTGATGATCCTGCAGGTCCCATCAAACCAACAGAGTAAAGACAGATATATACTTGGCATTTTAAAGGCAAAACACTACTGATGCCAGATTTTCAGGACATCCTGGCAGCACCTGTAACCAAACCCCTTTTTACCCCTCTTTTTACAGTGAAATAAAATAGTTGCTTTCTCCACACCACCGGGTTTCAGCTTGCCCAGAATCTCTCTCTGGGCCCTTAGCTTACAGCCCAGACAACAGAGGCCTCCTTGAGTGGGGGGTATTAATGCATCATGCCTATTCTCGATGGTTCACCCTGGAGTAGGGTAGGACTAGGCGTTTTCCCTGCTGTTGCTTTCTTGCTGCCACTGCTTTAGGCAACCTTGAAAGAAAATGAACAGGTTACAGAATCTCCAGTAGACCCCACTAGCACTAAGGAAAAACTTTCTTCCCTCTGGGCCACATGCCCCAATAACTCAGATCAGAGAGGATGTTAGATCTGCTCAGGTCAGTGACTAAGAAGCCCAATAACATTCCAGTTGGTGTAGCATGGGTTGGGATGACCACAGATAAGAACATCAAGGTATAAGTAGCAAGGCCTTTCCATATCCTTGGTGAAACAAAGGCCATCAAGCGTAGCCTCCTGTGAGAGATGGCCTCTGATTTGTCTTCTGGCCAAATGGCTGTGAGAGCACTCAAGTAGTAATGGAGGATCCAATGCTGTTCTTCAGAAGGTAACTTGACAGCTGAGGGGAACATCCCCAGGCCCTGTCTTCCCATCACTATAGCTGCATGCTCCTCCGCATGGCTCAGCCTTCACTCCAGAAGGAGCTAATATTCCCAGAGGCTGGGCACAATGGAAATCATAATAAAAAGATTGTGATGTTAT EMBV3_33842 TGCCTCAGTTTTCTGTTGCAAATTGGTGTTTGTGAATTTTCAAAGTGATTTTCTAGTCTC Gene GeneID:517248|IMPACT:NM_001102501:22_cdna Constitutive 3 NULL GeneID:517248 24 GENE IMPACT MGC152516 Impact homolog (mouse) EMBV3_16701 CTTCTGTGATCTTGGTAGCCTGCTGAAGCTCTCCTGCTCAGACACATCCCTTAATGAGCT Gene GeneID:504501|LOC504501:XM_002691560:14_cdna Constitutive 0 NULL GeneID:504501 11 GENE LOC504501 NULL similar to Olfactory receptor 1J4 (Olfactory receptor OR9-21) (HTPCRX01) EMBV3_16406 TTGTGTCTAACAGAAGCAGAGAGCAGAGGGAGGGCCCAAATCCAGGTATGGACTGGATCA Gene GeneID:282870|CYP1A1:XM_002696635:182_cdna Constitutive 0 NULL GeneID:282870 21 GENE CYP1A1 NULL cytochrome P450, subfamily I (aromatic compound-inducible), polypeptide 1 EMBV3_19405 ATGTACAGACTACAGCAACTCCTTCCAGCCTGACAATTCAAGGTTACGCTTACTAACGCG Gene BVT0102_021956 + 1 EMBV3_02779 GK000024.2:58790833-58797002 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140702 TCONS_00140700 TCONS_00140701 1 XLOC_085194 Coding TCONS_00140700 XLOC_085194 Coding Coding LMAN1 24:58793972-58810943 j TSS104954 4182 1 TCONS_00140700_1 296 10 0.754154390100177 0.000662806332095505 0.000138937217882795 0.000225116991065364 0.000276102178999642 0.000534693528319311 8.80385654839754e-05 4.81100642635994e-05 2.74328272956444e-05 0.000356825872577381 3.05465336741187e-05 1.24079468011441e-05 2.00608565721984e-05 0.00011543344113456 2.92228192311838e-05 2.70345167932067e-05 0.00706679310380568 0.00418625969379205 0.00774761726675595 0.000408000459705515 0.000473637415225587 0.0001685684393798 0.00209370993963649 0.001015630587647 0.00424770047439093 0.000622093798039533 0.00127896378320867 0.000449144464095842 0.000113852716390322 0.000226639100329517 0.000128516318529402 NM_001098943.2 LMAN1 Bos taurus lectin, mannose-binding, 1 (LMAN1), mRNA. 0.0 2071 99.91 0.275227164036346 NM_005570.3 LMAN1 Homo sapiens lectin, mannose-binding, 1 (LMAN1), mRNA. 0.0 1871 83.72 0.419894787183166 TCONS_00140700_1 sp|Q9D0F3|LMAN1_MOUSE LMAN1_MOUSE Protein ERGIC-53; 0.0 535 90.20 0.996621621621622 1 coding 0 0 0 0 -0.146195083210985 0.480239341699127 -0.00682868419397622 0.88741548214331 GACCATCAAATGATGGTGCTAATCAAGCTTTATCAAGTTGCCAGAGGGACTTCCGTAATAAACCCTATCCTGTCCGGGCAAAGATTACGTATTACCAGAAAACATTGACGGTAATGATCAATAACGGCTTCACACCAGATAAAAATGATTATGAATTTTGCGCCAAAGTGGAAAATATGATCATCCCCGCCCAGGGGCATTTTGGAATATCTGCTGCCACTGGAGGTCTTGCAGACGACCATGATGTTCTTTCTTTTCTGACTTTCCAATTGACTGAGCCTGGGAAGGAGCCACCTACAGTTGATAAAGAAATTTCTGAAAAAGAGAAAGAAAAGTACCAGGAGGAATTTGAGCACTTTCAACAAGAGCTGGACAAAAAAAAAGAGGAATTCCAGAAGGACCACCCCGACCTTCAAGGGCACCCTACGGATGAAATGTTTGAGAGTGTGGGAGACCGTGAGCTGAGACAGGTCTTCGAAGGACAGAATCGTATTCACCTTGAAATCAAGCAGCTGAACCGACAGTTAGATATGATTCTCGATGAACAGAGAAGATACGTCTCTTCCCTGACAGAGGAGATCTCTAAGAGAGGAGCTGGAGCCCCAGGGCAGCAGGGGCAGACCTTTCAACAAGAACTGGATACTGTTGTGAACACTCAGCATGAGATTCTGAGACAAGTAAACGAACTGAAGAACTCCATGAGTGAAACTGTCAGACTGGTGAGTGGCATCGCGCACCCTGGGCCGGCGGCGGGCGTGTACGAGACCACCCAGCACTTCAACGACATCAAGGAGCACCTGCACATCGTGAAGCGAGACATCGACAGCTTAGCACAGCGAAGCATGCCATCAAACGAAAGACCGAAGTGCCCAGAACTACCACCATTCCCATCGTGTTTATCTACAGTGCACTTCGTTATATTCGTCGTGGTACAGACGGTGTTATTTATCGGTTATATCATGTATAGGACTCAGCAAGAAGCAGCTGCCAAAAAATTCTTTTGACCACCATTTTCATGTGTACATCATGTATGTATGTACAAAATGTCTTTTTGAGGGAATTTAAGTATTTAAATTGCTTTTTAGTCTAAATTATTTTGTATAAAATAACTGTTTAAACATTGACTTAAGAATAAACCTTAAAGACAACCACATGTAAATTTGTGCATAGTACATAAATCTATTTAAATTTCAGTGAATTTCTGGCCAGTAGAATACAGCCACTGCACAGAATATTGGTAAATCAGAGGGTTAAAAAACAGAAAGGGGGAACCCCCATCTATGAAAGTAGCCCGTAAGTCTCTAGTGTTGGAGATTTCTGTCTTTAGCATAAATGCCCTCGCCCTCCTGCCCCCAAAGTATGAGGTCTGAGAGCTACCCATCATGTTTATTTTGTAACCAAAGTCTTTTTTTTAAGAGGCCAGAATTTCCTGTTCCAAGACTCAGTGCTGCAGTCCTTAAATCTAATACAGCTCCCTTTGAAATCAAAAAATATTTTGTCTGAGTGTTAGGATCTGGGTAATAGGATTCAGAATGTTTATTAAAGCATTTTTTCCCCTTCTGATCATCAGTGATATATTTCACTTTTAAAGGAAATTTGGGGGGAGAATTAAGAGCTGCTCTTTGCCTGAAAAACCATTTAGGTGGGAACATTCCTCTGATGATGGTTTTTATGGGTCTTTTACCTGGTGAGGTGTTCATTTCATGATTGCTCATATTCTTGAATGTCTGTGTTCCAGTGGAGTCAGTTCAAAATTACAAAACTCAGTCTGCCTCCGTATCTCTAAACCCACCTCGGATGGCGCGTGCTGAGGACACTTGAAGGCCACAGCACCTGCCCCTGCCTTCAGGCTGAGTCGCCCCACGCAGCGCGGCGGCGGTGGCACTGCGTGTTAGTCGCGAGAAGGCAGGAGCAGCAGCAGTGTTAAAGTTTCTGAAAGCAAAATCTGAAAAATAGTGTTATTACTTCTGATTTCTTTGTTTTAATGCCAGAACTAGGGGTATTGTGAAGCACGCGTTAGTAAGCGTAACCTTGAATTGTCAGGCTGGAAGGAGTTGCTGTAGTCTGTACATAGTTCTAGGTATTATAGAGACTGTCTGTAAATGACATTTAATTTAGTTTTCATAGCTGATGTAGACTTCAAAATACTCTTACATTCCCTTGTCTAGCTAGCTAAAATGATGCCTTTCGTTTGTCATAGCACTGAAAATAGTGCTGTTTAATTCTTCACTGCTTTCAGAAATTTGCTCTGAGTTGTTATTTGCTGATTGGACTGCCTGCCTAAAACCCATACAGAGACTCTGAAGAAGTCTGCATTAGAGCAGTAGCTAACGAGTACTGCATATGCAGACAGTCCTAGCATTGCTTTTTACAAAGCATTTATCCCAGAACACTGAACAAGAATATTCTATTGATGACTCACACACTTAGGACCACTTCAACATAGAACTGCTCCACAGGTTTTTTTTTTTCTTGTAGTGTTAACATGTTGAAATTCATATTTCAGAGACATCATCATGACAGAATTTACTCTTATTCCATGAAAAAAAATTAATACTTTCAAAAGAATGTTTCAGTTGTAGACTGTGAGACTTGGAAATCCTCTTGAGATGAAAAAGCTGCAGAATATCCAGTATTATAAAAATCCAGAGCCACGTGTGCCTGAACTTAAAGGAATATTAGATCTATGCAGTGTACATTTTCCAGGCTAAATTTCAAGAGGAATTGTTGCGATCATTTCTAATGCAAGTGAAGACAGCTAGGACAAAAGAGCATACGCGTGAATCTTTCTTTCTTTCTTACTAATTTAATTTGCTAAAAAAAAAAAAAATCACTCAGTAAGACGGTTCATACAAGTTATTATTGTTGGAAATTTGGTTTGTTTTCCTCAAAGTCACTGACTTCAAGTAGTTCATTTCTGTTTTTTAAAAAAAGGTGTTTGCTATGTGGGAAAATCAATCACTGCCAGGATTCTCTCATTTCTGTACTGTTTTATAGAATTGAATTTTAACTTTTCTCACACCAGCAAGTATTTTACAGGTGCCTTGGATTAAAACAAAGTCGATTTTACAATTTTACTGTAAATCTTTGTGCTTCTGCCACTTTAAAAAAGAAATGCAATTGTATGATGGTTAATACTCTTATTTAATCTGCCTTTTGCGTTCTGAGTGTTTGAATGTTTTATTCGGCCTGAACTTTCACTGTGAGGGCACGGTATTCTGTCACATAGTAAAGAGACATCAGTGTTTCTCAGAGTGAGGTCTGTGAGCCCTCTGAGTCCTGGAGCGCTTGTGAAGAACGCAGATGCCGGAGCGCCATTCCCCACCACCTGCATCAGATCTCCGCAGTGGGAGCTGCAGAGAATCGTTTTCGGCAGGTGACTCTGAGCGCACTACTGTTTAACAACCACTGAGACGAGGAGGGGTGAAAGAAACACGGGTTTGTGTAGTTTTACAGCTGAGCTGAAAGCTAACGTAACATTTTCATCGTCAGCGACATTAGCAAATGTGCACTGATTCTTTATACTTAGAACTTATTACTTAACGTTCTTTTCACCGAAACGCTTGGTTTATCAGCAGCTACAAACTAAACCCAGGTTGCCGCCTGTGGCTCGCGGTACTTTGGTTGACGGCTCTTACAAATCATCTTCAGATCATGGTCGAGCCATGGAAACCCCCATCTTCGCGTCTGCCTGCTAGAGCGTTTGCTTTTCCTGATTGTGGTTTTTGTGACATTTTCTCTCAGACAGTTGTACTTTTTGATAACTTGGGGAAAACAAAAATTACTTGAATAAGGGATTGCCTGACCCGCTGCATCGCAGGGACACAGTCTTTGTAAAGAACGTAAATGACAGTTGTGAATATTAAGATGTGATTATCTTTTTCCTGTCCATGTGCTCATTGCAGGGAGATAGTGAACAAATGATTATACTGGGGATTTTTTTATTTATAAGATCTAATGTAAAATCACCACTTGCAACTTTTTAGATCTGTATGTTGCCTGTTTAATATATTCTTTTAACATTTAAAAGGGTTTTCTATCCATTGTTAAATTCAGTTAGGTGACATTTCGTCGTGTGTTTTTTTTTCCTGATTGTTAATTTGATGCTAGCTGGAATTCAAAAGATGACATTGACCTTATTCAAATAAAGAAATATTTTAGTAAACTTAACTTTTTCCTTCA EMBV3_40856 GAAGAAGATATAACAGAGGGAAACGCCTTGGAAGCTACAGGCAATAGATCAAAAACCCTG Gene BVT0102_376370 - 1 EMBV3_23342 GK000003.2:53862658-54031911 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11223 CACATTGGGTCGGAAAGCAAAATGAAGGCATCAACCAAAACAGAAAGCAAGGCCACCAAG Gene GeneID:522017|LOC522017:XM_002690253:86_cdna Constitutive 0 NULL GeneID:522017 9 GENE LOC522017 NULL similar to trace amine associated receptor 4 EMBV3_39756 CCTCTGTACAGCAAGACGTTTCTTGCCTTTTGTTAATGCATTGTTGTAAAGTATTCGATG Gene GeneID:523661|CTNND2:XM_002696428:41_cdna Constitutive 2 NULL GeneID:523661 20 GENE CTNND2 NULL catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) EMBV3_40475 CGGCCCCAAAGAGTCAAATACGACTGAGCGCACACGTACACACACTCAACAGCTCATTTA Gene BVT0102_137988 + 0 NULL GK000021.2:1793203-1832436 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118508 TCONS_00118518 TCONS_00118519 TCONS_00118514 TCONS_00118517 TCONS_00118512 1 XLOC_072652 Coding TCONS_00118517 XLOC_072652 Coding Coding - 21:1772128-1820331 - TSS88973 4350 3 TCONS_00118517_5 69 0.380919540229885 3 0.909817020040662 3.22047481450366e-10 9.77440586855386e-11 2.67303306101969e-05 1.01255626320038e-05 2.00269342356978e-07 8.58626759180649e-06 6.85695920329986e-29 4.10063715845466e-10 1.29751268333074e-18 2.85131129135606e-06 2.97885922619943e-06 1.65808751706621e-12 3.47977036331332e-11 2.6375492213599e-06 2.5383193670249e-06 0.00244998390423067 0.00354725420811368 0.00284940570206272 1.4100719012674e-22 5.47274775346975e-23 2.89559673771766e-20 0.00128864532141145 0.000443726775935001 0.00184966246598998 1.57429194559972e-08 1.7763912297928e-06 1.9156673613658e-05 9.68343897402473e-05 7.27821725668756e-06 1.42814162321054e-13 XR_229189.1 LOC101905329 PREDICTED: Bos taurus ankyrin repeat domain-containing protein 26-like (LOC101905329), transcript variant X2, misc_RNA. 0.0 2185 100.00 0.27816091954023 XM_005252409.1 ANKRD26 PREDICTED: Homo sapiens ankyrin repeat domain 26 (ANKRD26), 3e-84 318 84.01 0.0673563218390805 TCONS_00118517_1 sp|Q811D2|ANR26_MOUSE ANR26_MOUSE Ankyrin repeat domain-containing protein 26; 1e-21 89.7 74.58 0.983050847457627 0 noncoding 1 0 1 1 -0.595416926795943 0.174418025970049 -0.0383345061947562 0.593236167095668 CCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGGCCTTGTTCACCGAAACTTGGTCTCACCATGTCGTTCTTTCTCTTACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTAGATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGAAGTGGCGCCCGAACAGGCTGATTCGAAGTCTGAGGATGAAAAGGAACAATTAAAGAAATACATTGAATTAAAACAATCGCTGGAAAATAGCTTGAACCAAGAAAAGAAGAAAAACAGTGAGTTAGAAAAAGAGATTACTGGATTGATGATCTTACAGCAGAGCTGGAAACTGCATCTTCAAAAGGTCTGCACCTGGATGCAAAAAATCAAGTTCTTCGAGAGGAGTTATTATCTATGAAAGGAATGCAAAAGAAATGTGAAAAACTAGAGAAGAATAAAAAGAAGTTGGAGCAAGAAGTAGTGAACCTCAGAAGTCATATAGAAATGAATATGATAGAACACAGTGAAGTAGAGCAGTATAAATGGGAGATTGAAGAAAGGGCGAGACAGGATCCTGTAGAGAAATTAAAGTAAGTCAACCAATTTTTGCAGGCTAATTTGTTCATCTGTCATGTGCTTGAATGCACCTCATTGTAAATTACGTTTTGGATCTATACAGCTTATGTGTTTCCTCTACTTCCCTTAGAGCAGTTGGTTTGGTAGTTTTCTGGAAGGAAGAGGGCACTTGTTTCTCCCTTTAAATATTTCCGTTTCCATCACAGTTATCACCAAATTGACCTATCAGAATGATTCTCACTAGAGAATCCTTTCATTTATAAGACCAATTGGTATAAAACAAGACTACTAGGAGGAAAAGAAAATATTGTGGTTTAGAACTGGTACCATCCTCTTGAATTATGTTTAAGTTGTCTTGTTCAATTTTTAAAATTTTAAGTTGATCCTCTTGTTCTTTGAATTATCAGATTATATAAGCACCACTATAACAATAATTCCACTTTAATTTTATAATTCACATTTAATTCACTTCACATCGACAATAATTGTTTTAAACTTCTGCTTTTTTTTTAACCTTTAAAATTGCTTTCTGAATCACTGAACCAATAAAATCAATAAACACTAGGAGTATGTTTATTTAGCCCACTGTACCCTCATGAGCAATTACTTCAATCATCATAGCAAAAGAAAATCTTTCATGTACTGAGTACTTTTCCTAACTGCATGTTATAGAAGAATCTCCCTGTTTGTCTCAACACTTTTACTTTGTACATATTTCTATATTATATGTAGCAATTTTGACCCCAAAATAATCTGCTTTGAATTATTTCATCACTGCCTTCCAAACTACCCCAATGCTAATTCATAATTTAAAAATAAAATATATGCATTTTTAATGTAAAGAAAATGTTAGTTCTTTTCAGAATGGCACAAAGTTTCCACAATTGCGTTTACATTAGTGTGCCTTGTCTAATCCTCCATAGTTTTAACCTTCTATAAGTGATATAATTTTTAAACCTTTGAACTCACATTCACAAGGAAAATGAGCATCTGTCAATAGAATCATTAACAGGTATCCTCCCAATTCCATTCAGATGGCACGGTGGTAAAGAATCTGCCTGCCAATGCAGGAGATGCAAGAGACACTAGTTCGATCCCTGGGTCAGGAAGATCCCCTGGAACAGGAAACGGCAACTCACTCCAGTCTACTTGCCTGTGAAATTCCATGAATAGAGGAGCCTGGTGGACTACAGTCCAGCGGCCCCAAAGAGTCAAATACGACTGAGCGCACACGTACACACACTCAACAGCTCATTTAGAGATTACGTCTGCTGGCAGTGCTTTGGACAGTATGCTCTTTTGTTGTTTTAGTTATAATTGCCCACATGTGTTAAGGCAATGTTAGCTCCCATGGTGAAGCTAGTTATAGTTCATGTCTCAAGTCTATTTGCTTCCTTTAATATGTAGGCAGTACGAGGTTTAGTTATTTATGCATTTTATTCATAGTGTCTATATGCATATATACCTTCTAATTAAATGTTTAGTATGTTTATATACTTTTATATATAGTCTGTAATGTAATCTAGGATGAGGATTATAATAGTGATGATAGAGATGATGATATCAGTTTTGTTTCTGAAATTTAGGAAAGCAGGAATCACAACGTCATGGAAATAGTGCTGTTCCCTAAATTCACCAAATGTCATGTGTATAGCAAGTGATTCAATTATACATATACATGTACCTTTTCTGTTTCAAACTCTCTCCCCTTTTACATTGTTACATAATATTGAGCAGCACTCCCTGTGCAGTAGGTGGGTCTTCATTCAACATCCATTTTAAGTATAGCAGTGTGTTCGTCACATCTTTTCTTTTTAAATTTCTGCATGTAAATGATATCATGCGATATTTCTCTATGTCTGACTTCACTCAGTATGACAATCTCTAATTCCATCCATGTTGCTTCAAATTACATCACTTCATTATTTTTAGCAGCTAAATAATATCAGTTTTTAATACTTTTAATGTGTGTGTTATGACTGACATTTTGGATGTTCCAAGGGAAGTGTGCTTTTCTTTTCTGTGCATGCGTTCAACCCAACTTCATCCGATTTCTGAACTTCTGTGGATGTAGATAGCTGTGAATATAGACACATTTCATAAGCATTTTGCAAGAATTTAATGTATCCACAATGTCAATGGGAAGAATAGTAAGAAAGGCCCTGGAATGATCTCTTGATATTTCACAGAAAAGAATTGCATGCTTCTGTAAGTGTGGCTTTCATAATTATGATATTCCACAGCTAGGAATTTGATGATCTGAAAGCAGTTGTTAGACAAATCCCTTACATTTTAAATAATATTTCATTTTATAATCAATTTTGTTGTTGTATAATTCTGACATGTAAAAGCATTGTTAAACCTGCAGGCCTTGAACTTTTCTTATAACTTGGTTCATGACAAGTATGACCCCTTCATCATTACTTGAAATAGTAGCCCAAAGATAAAAATGATTTCAAGAGACATTGTTAATAATACCTGTATCTGCACTGGTCTGTTTTCAATCTATTTTTGTTTTGAATATTCATACAGTCCTAATAAACTCCTACATCTAAAATTTTATCATTAAGATAAAGTCAGCAAAATGTTTTTGAAAGGTCTCTAAAGGAGGAGTCAGTTGTCCTAATTGTCTTCACAAATATAAAATGAAAGTGAAAGTCTCTCAGTTGTGTCTGACTCTTTGTGACCCCGTGGACTCTACAGTCCATGGAATTCTCCAGGCCAGAATACTGGAGTGGGTAACCTTGCCCTTCTCCAGAGGATCTTCCCAACCCAGGGATCGAACCCAGGTCTCCCTCATTTCAGGGAGATTCTTTACCAGCTGAGTCACAAGGGAAGCCCAAGAATATTGGAGTGGGTTGCCTATCCCTTCTCCCGCGAATCTTCCCAACCCAGGAATCAAATGAGGTCTCCTGCATTGCAGGCAGATTCTTTACCAAATGTGTGACTTTCAAATAAGAAATATATAGAAAGATTATGCAAAGAAGTCTCAAAAGCAACAGGAAGAAAAGAAGCAATCTAACATCAATGTACAAGGTTTTTCTTTTTTCCTTCATTGGAGTATCACTGTTATTCAGAACTGTGCTAGTTTCTACTGTATAGTGAGGTGAGTTAGCTATATGTTTGCATACTTCCCCTCCCTCCGACTCCTGACATCCCATCATCTAGGTCACCGCAGAGCACTGAGTTGAGCTCCCTGTGCTTTACAGCAGGCTCCCACTAGCTCTCTGGCCATCATCAAAAATCTACAAACAAGAAACGCTAGAGAAGGTACGGAGAAAAGGGAACCCTCTTGCACTGTTGGTGGGAACTTAAATTGATATAGCCACTGTGCAGACAGGTATGGAGGTTCCTTAAGAAACTAAAAGAGTAGAACTGCCATTGACTCAAGAATTCCACTACTGGGCATATACCTGAGAAAACCACAATTCAAAAAGACACATGGACCTGCAGCACTATTTACAACAGCTGGGACATGGAAGTAACCTAAATGTTCACTAAATATAGAAACTCTTAAATAGATTCTTTACTAAAGGAGATAAGCAGAAGTCAAATGATCACATAAAGGATAGTCACTGTCATTAGTCATTATCAAAATGCAAATGAAAACAAAAATGAGATTATGCTAAACATGTATTTCAATTGTTAGAGTTAAATAAAACAAATTACAAAATGGTATAA TCONS_00118509 TCONS_00118510 s 3' 68606 TCONS_00118509 TCONS_00118510 s 3' 68606 EMBV3_03134 TGGTCGGGGAAGATCTCATATGCCTCAGGGCAACTAAGCCCATGTACCACAGCTACTGAG Gene BVT0102_044723 - 1 EMBV3_35933 GK000005.2:55179155-55841970 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00818 GCTACCCACTTAAACCTCTGTTAATGAGGCTGTTCCTATTCAGAATCTCTCTGTACCAAT Gene BVT0102_088160 + 0 NULL GK000026.2:13446979-13474080 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150079 TCONS_00150080 1 XLOC_091805 Coding TCONS_00150079 XLOC_091805 Coding Coding TNKS2 26:13383832-13451070 j TSS112514 7924 1 TCONS_00150079_5 1092 0.0584300858152448 25 0.882520041048827 1.01381440191755e-07 2.92733094886512e-07 6.17081587967543e-05 0.000130826911650539 0.000118915789715364 5.74942456963562e-05 6.1583859441056e-07 3.20951170628042e-07 0.000137001754196714 0.000116320047853866 1.65678625161025e-08 7.65833719429783e-11 6.36883128101799e-07 5.09261630917011e-05 2.92998653595385e-09 0.0050216450719697 0.000291105498516653 0.00320326762518117 0.000251711716537452 0.000224527172078359 6.84696981264714e-07 0.00175354446645571 0.00150230643024007 0.000379382785608335 0.00023033763030278 0.000158388732122427 2.98095315106239e-08 2.12213333348736e-08 0.000190098525214359 1.01385265219444e-08 XM_003584080.2 TNKS2 PREDICTED: Bos taurus tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 (TNKS2), mRNA. 0.0 8076 99.89 0.56675921251893 NM_025235.3 TNKS2 Homo sapiens tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 (TNKS2), mRNA. 0.0 5570 86.12 0.592125189298334 TCONS_00150079_5 sp|Q9H2K2|TNKS2_HUMAN TNKS2_HUMAN Tankyrase-2; 0.0 2016 90.34 0.974358974358974 8 coding 0 0 0 0 0.0199598355540042 0.861247260177301 0.0246385907689678 0.5967201906211 CGCGTCGCTTCTGAGCTCGAACGGCGGGTTCTCGGTGCCTCCGCCTTGGCGGGGCAGTCGGGGGTCGCGAGGCCGATCGAGGGATGCGAGGTGGCGCGGCCATGGGACTGCGCCGTGCCCGGTGACAGCAGGGAGCCGAGCGGCCCGGGCCCTGAGCGCGTCTCCTCCGGGGGGCCTCGCCCTCCTGCTCGCGGGGCCGGGGCTCCTGCTGCCGTTGCTGGCGCTGCTGCTGGCTGCGGCGGCGGCCAGAATAATGTCGGGCCGCCGCTGCGCCGGCGGGGGCGCGGCCTGCGCGGGCGCTGCTGCCGAGGCCGTGGAGCCGGCCGCCCGTGAGCTGTTCGAGGCTTGCCGCAACGGGGACGTTGAGCGAGTTAAGAGGCTGGTGACGCCCGAGAAGGTGAACAGCCGCGACACAGCGGGCAGGAAGTCCACCCCGCTCCACTTCGCCGCAGGTTTTGGTCGGAAAGATGTAGTTGAATATTTGCTTCAGAATGGCGCGAACGTCCAAGCTCGTGATGATGGGGGGCTTATCCCTCTTCATAATGCCTGCTCTTTTGGTCATGCTGAAGTGGTCAACCTCCTTTTGCGACATGGTGCAGACCCAAATGCTCGTGATAATTGGAATTATACTCCTCTCCATGAAGCTGCAATTAAAGGAAAGATTGATGTCTGCATTGTGCTCTTACAGCATGGAGCTGAGCCAACCATTCGAAATACAGATGGACGGACAGCATTGGATTTAGCAGACCCGTCTGCCAAAGCAGTGCTGACTGGTGAATATAAGAAGGATGAACTCTTGGAAAGTGCCAGGAGTGGCAATGAGGAAAAAATGATGGCTCTGCTTACACCATTAAATGTAAACTGTCATGCAAGTGATGGCAGAAAGGACTTATACTATGTTTTAGGAGGCACGAAAAGACACCTAACAACTGATCTGGTACCCCTGCACAACGCCTGTTCCTATGGTCATTATGAAGTAACTGAACTTCTGGTCAAGCATGGTGCCTGCGTAAATGCAATGGACTTGTGGCAGTTCACTCCTCTCCATGAGGCTGCTTCCAAGAACAGGGTTGAAGTGTGTTCTCTTCTCCTGAGTTATGGCGCAGATCCAACACTGCTGAACTGTCACAATAAAAGTGCTATAGACTTGGCTCCCACACCACAGTTAAAAGAAAGGTTAGCATATGAATTTAAAGGCCACTCCTTGCTTCAGGCTGCACGGGAAGCTGATGTTACACGAATCAAAAAACATCTCTCTCTGGAAATGGTGAACTTTAAGCATCCTCAAACACATGAAACAGCATTGGTTAATGCTCTGGATAATCTTGGTCAGACTTCTTTGCACAGAGCTGCACATTGTGGTCATCTGCAAACCTGCCGCTTACTCCTGAGCTATGGATGTGATCCTAACATTATATCCCTTCAGGGCTTTACTGCCTTACAGATGGGAAATGAAAATGTGCAGCAACTTCTTCAAGAGGGTATCCCATTAGGTAATTCAGAGGCAGACAGACAGTTGCTGGAAGCTGCAAAGGCTGGAGATGTAGAAACCGTAAAAAAATTGTGTACTGTTCAGAGTGTCAACTGCAGAGACATTGAAGGACGTCAGTCTACACCGCTCCATTTTGCAGCTGGCTATAATCGGGTGTCTGTGGTGGAATATCTGCTGCAACACGGAGCTGACGTGCATGCGAAAGACAAAGGAGGCCTTGTACCTTTGCACAATGCATGTTCTTATGGACATTATGAAGTTGCAGAGCTTCTTGTTAAGCATGGAGCAGTAGTTAATGTAGCTGACTTATGGAAATTTACACCTTTACATGAAGCTGCAGCCAAAGGAAAATATGAAATTTGCAAACTTCTGCTTCAGCATGGTGCAGACCCCACAAAGAAAAACAGAGATGGAAACACCCCTTTGGATCTGGTGAAAGAAGGAGATACAGATATTCAGGATCTGCTTCGGGGAGATGCAGCTTTATTGGATGCTGCCAAGAAGGGCTGTTTGGCTAGAGTAAAGAAGCTGTCTTCACCAGATAATGTAAACTGCCGTGATACCCAAGGCCGGCATTCAACACCCTTACATTTAGCAGCTGGTTATAATAATTTAGAAGTTGCGGAATATCTCCTACAGCATGGAGCTGATGTGAATGCTCAGGACAAAGGAGGACTTATCCCTTTACACAATGCAGCATCTTACGGCCATGTAGATGTAGCAGCTTTGCTAATAAAATATAATGCGTGTGTCAATGCTACGGACAAATGGGCTTTCACACCTTTGCACGAGGCAGCCCAGAAGGGACGAACACAGCTTTGTGCGTTATTATTGGCCCATGGAGCTGATCCAACTCTTAAAAATCAGGAAGGACAAACACCTTTAGATTTAGTTTCAGCAGATGATGTCAGTGCCCTCCTGACAGCAGCCATGCCCCCTTCAGCTCTGCCTTCGTGTTATAAACCGCAAGTGCTCAATGGCATGAGAAGCCCAGCAGCCACCACAGATGCTCTGTCTTCAGGTCCATCCAGCCCATCAAGCCTTTCTGCAGCCAGCAGTCTTGACAATTTGTCTGGCAGTTTTTCTGAGCTATCTTCAGTAGTCAGTTCAAGTGGAACAGAGGGTGCTTCCAGTTTGGAGAAAAAGGAAGTTCCAGGAATAGATTTTAGCATAACTCAATTTGTAAGAAATCTTGGGCTTGAACACCTAATGGATATATTTGAGCGAGAACAGATCACGTTGGATGTATTAGTTGAGATGGGACACAAGGAGTTGAAAGAGATCGGAATCAATGCTTACGGACATAGACACAAACTAATTAAAGGAGTTGAGAGACTTATCTCTGGACAACAAGGTCTTAACCCATACTTAACTCTGAACACCTCTGGAAGTGGAACAATTCTCATTGATCTGTCTGCTGAAGATAAAGAGTTTCAGTCTGTGGAGGAAGAGATGCAGAGTACAGTCCGAGAGCACAGAGATGGAGGTCACGCAGGTGGGATCTTCAACAGATACAATATTCTCAAGATTCAGAAAGTTTGTAACAAGAAACTATGGGAAAGATACACTCATAGGAGAAAAGAAGTTTCTGAAGAAAACCACAACCATGCAAATGAAAGAATGCTATTTCATGGGTCTCCCTTTGTGAATGCAATTATCCATAAAGGCTTTGATGAAAGGCATGCCTACATAGGTGGCATGTTTGGAGCTGGGATCTATTTTGCTGAAAACTCTTCCAAAAGCAATCAGTATGTATATGGAATTGGAGGAGGTACTGGATGTCCAGTACATAAAGACAGATCTTGTTACATCTGCCACAGGCAGCTGCTCTTCTGCCGTGTAACCTTGGGAAAGTCTTTCCTGCAGTTCAGTGCAATGAAAATGGCGCATTCTCCTCCAGGCCATCACTCAGTCACTGGCCGACCTAGTGTAAACGGCCTAGCATTAGCTGAGTATGTTATCTACAGAGGCGAGCAGGCTTATCCTGAATATTTAATTACTTACCAGATTGTAAGGCCTGAAGGTATGGTTGATGGGTAAATAGTTGTTTTAGGAAACTAGCACCACCGAACCTAAAATCATCTAAGCAGCTGGTGGCCTCGTAAGTTTTACTCCTTTGCTGAGAAAAATCATCTTGTCCACAACCCTGTGGCAAAAGGTTAAAAATGTGAAAGGGTTTTAACATTCTGACTTGATAAAGCTTTAATAATGTACAGTGTTTTCTAAATATTTCCTGTTTTTCAGCACTTTAACAGATGCCATTCCAGGTTAAACTGGGTTTGTCTGTACTAAATTATAAACAGAGTTAACTTGAATCTTTTATACATTATACATTGATTCTAACAGAAACTGTAATTCCCCTCAACAGAACTCATTTTACTAATACAGTACTGTGTTCTTCAAAACACAGCATTTACACTGAATACAGTTTCATTTGTAAAACTGTAAATAAGAGCTTTTGTACTAGCCCAATATTTATTTACATTGCTTTGTAATATAAATCTACTGTTTTAGAATGGCAGCGGTTTACAAATTTTTTTCATATGTACTGCTCATCTGTACTTCATCTTGAATCATCATGATTGAGTGATCTTTGACGTTTGATTCCAGAGGCTGTGTTGAATTATTAGCAGACACCTTGTCACTTGGGAAAGATTGATCCCTCAGATTTAATTTGCTGATGGAAGCATTTATCTCTCATCAATAATCTCTCCCATTTAAGAACTTGTTTCATAAATACTCTGGGAGTTTAATTTGTGATAACTTTGTATGTATAACACACATTCCAAAGAGCTCTTAACTATCACGGTCCTGATTATTACAGACACTTCTTTACAAGCCTCACACTCTGGGTTTCACATGGAAAATTTTTCTTGTTATTTTGTGAAAATTAGAGCAAGAGCTTCTGTTTTTTAGAGAACAATTATAGTGTTGTTTTCATGGAATGTAAATAGGAGGTTGAATTTCAGATGTGGGAAGGGTAATCCTGAAATTTTTCAAATCTGTTCAAATTACCTTAAATTTAAAGGGAAAAAAATAGCAGATGGGAGTGGGTAGTTTTTCTCCTGTTCTTTTTCTTTGGCCTTACTGTTTCGTGTATAACCAGTTTATACACCATAGGTAAGCTCAACCCAAAACCATGACACGTGGGTGTCCCAGTTCTCTCCTGGCCTGCTGAATAGGCAGGTGCCATGAGATGGGTGCTTCCGCTTCTGGGTCGCCTCACTGTGACATGTTACACCCACTTGGAAATACACTCTGTGCATCGCCTGGTGACCAGGCTTGTTTGGCAGCTGTGGAGGGGAATACCATCCCATAAAATGCCATTCCTACTTTTTAAGGTAAAACTACTTTTCCATGAAATATATTAACGCATCTTGGTACAGAGACATGAGTTACAGCTTGGCAATCTGTTGACTCTCGTTCTCTTGGAAGTCAAGGCAAGATTGCTACCCACTTAAACCTCTGTTAATGAGGCTGTTCCTATTCAGAATCTCTCTGTACCAATTCACATTTATTTTACATTTTATTCAGTCTCTAAATTAACTGGGCCTTTGCAGTAATTTGTACATAAAGTGCTAGAAAATCATGTTTCTTATCTTGAGTAAGAGTTATTCACAGTAAATGCATATCTGGAGTTGTTTCTATTGATGTAAACTGTGATCATTATTTAAGAGGTCAATTCCTGACCATAAAGTGCTTTTTATACAGCTCTCTAATAATTGCAAATACGATCCTAAAGTCGTTTCTTGGAATACAAATGGAGTATGCCAAATTTTATATAATTTTTCAGGTTCTGGAAGCTTCCAGGTTTTATAATTAGAAGATAATGAGATGAGTTAGTGGAGTTTATATTTACATACCTTCTCTCTCAACATTTAGCTCGTATTGCTCGCCCTATGAGTGAATCTGGAATTGCTTATCATGTAAAATCATCGTGGTCTATGAGTTTACGATTTTGCAGCCTGTGTTGTTTCATCTAATTCATTTCTTAATTAGTGTGTTGCTTTTCTATGAATGATTATATTGTGGTTAATATGTTAGCATGGCATATTTCAGATAGCTTTTTGTTAGGAGCTTAGGGGTGGGGGGGTGGGACTGGGGATTTCTTTGATGTTTTTGCATGAAATACTTTATGATGATGGAATTGCTTTTTCTTTTGTCTTCTGATTTTTTTAAAGAGATTTAACTTTTTGTGTGAGTAGTACTATTGTATCCATCTTGAGTGTCTTGTACTGTATCACATTCCATACCCTCATTTAATTCTTAATAAACTGTTCACTTGTTTTTCTTGGTAGCTTGGTAATTACTGGAATAGTATAAATGTATTGAATGGTCTTTGAAAAAAATGAATCAAGATTACAATAAACCACAATTGCAGGAAAATAATGTAGTTTTGAGTCTACTAGTGATAGACACTGCAGTTTAAAATTTGAAATACTGAACGCTGTGACCATACCTCCTCAGATGCTTTAAGATGAAAGTAGCTGTCATATGCTTTTAGACATTTAGTCCACCCAACATAAGTTTTGGCAAACCTTCAAGCTCTTGCCTGGAAAATCTGTTTTTTTGTTTTTTTTTTTGCCATGCTGTACAGCTTGCAGGATTTTAATTCTCCAACCAGGGATTGAACCCAGGCCCTCAGCAGTAAGAGAGCAGAGTCCTGACCCCTGGACCACCAGGGAATACCCCAGGAAATCTGTCTTAACTTATAAAGAGGCATGGAAAATTTATGAGTTTACAAACCTTAAAGTTAGGGGTATTTATTACTCTTAAAAGAAAAATTATAATAAGATATATTTATTTTAGATTTCAGTATGCTGAATGTCTGTGTGTATGATCAGTTCCCTGCTTTCTATAATAAGAGAACAGTGGTGCAAATAACTCATAAGTCATTTAGCTTTGAAATACTTTTCAGCAGCTTTCTTACTGCTTGAGTTGGGATAATGTTAACGTGTCCGCGTGCTAGTTCCTAAGCATGTGCGATCCTTTTCTTTGCACGTTGATGAGGAAAGAAAATTTGCAATAAGTTTCCCTGAGCTTTTATGATGAGTATTCCTGACTGGCCCTTTTCCTACTGTCCTGTCCTATTAGAGGAGTAGAGTAACAGGAAGCAAGTGGTGGTATACATTCTTCACCAGGAGAACTGTCAGATTTGTATAAAGTTAGCCTACTGAACCTGTACCCACCTCCACCTCCTCATGCTTTACTAGCTGAGGAAGACTGTGACCTAAAATCTTAATTATAGCTTCTTAGAAGGTTCTTGCTGTCCACATGCAAGCCATCATTGTCAGAAGTGTCTTCTCCACTTTGTTACCCATCCACAATTGTTGTCATCACCATCACAAAAGTCTGCACAAAGCCCTCCAGATGGTCTGCCAGTACACTGTAGAGCAGTGCTGTGTGAAAGTGACCTGTAGTTGGGGCTGGCCTGCAGCCTGTTTGTTTCCAGCCCATGGAGAGATGAAAACACAAATTGAGAGGAAACTTTGATGGCAGTTTGACATTGATGCAATGTTTTAAATTTCTTTTTTTTTCTTAAAGGCCACACCATGCAGCATATAAGATCTTAGTTCCCTAACCAGGAAATGAACCCACGCCTCCTGCATTGGGAGCACAGAGTCTTAACCACTGGACCATCAGGGAAGTCCCTTAAATTTCTTTACCTAAGATTTTGGTCTGCAACAAATTGGAAATTAAGAGGAAAACAGAAACTCTAGTCCCTCACAGATAATTTGAAAATTAGAAGAAAAATAATCTGTTTGGTTTACCACTTAGACCCATCACTTAGCACATGCTGACACATAATAGTTCCTCAAACAAGTTTTACTTGAGTGAAAAGAGTTATTAAGTGATTGGGCTCTAGAGTCAGATGAATGTGGACTTGAATTTTAGCCTAGTCCATACTGACTGTACAACCTTGAACAAATTACAGTACTTATAGGTTTGTTGAGGAAACTAAATGATTTTCTGTATGTGCTAGTAAGTACTGTGACTGGCAAAAGCTGGTTATTGTAATTATATTATTATTTCCCTGAATTCCCGGGACCACTGGTTGGGTTTTTTCACTTGTCATGGGGCTACAGAACATAGAATTTTAAAACAAGCAAAGTTGATTGGCCACTGGTTCAGATGAAAACCTTTTTTTTCATCTTTGTTCAGATGAAACCTTAAGAAGCTCAAAATGTGAGGTATGTATGTCACTAGGTGGCTGAAGATCTTAGTTAGAAACTGACTCATAAAAGCACACAGACAGTACAGCAGCCTGGTTGGGGAAAGAATGCATACCCACAATCTTAACTGCATCATATTGTTACAGTACAGAAGAAACAAACTCCGCTCAGATGATCAGAAGTCCAGAACAGTCTATACTGAGTACAAATCAGCAGATAACAACCTTAGAGGTTTAGCACCCCCAAAACTTAATATAGG EMBV3_02317 TCCATCCTCTGCCTGACCAGTGCTTGCTTCACCTGTACTTAGGTATGTGACTCATCTTCC Gene BVT0102_136341 - 1 EMBV3_08082 GK000022.2:39502562-39766370 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38182 TCCCGTGAACTTGTTTAACCTGTTATTCATCATGCCTGAACCGGCTAAGTCTGCTCCGGC Gene GeneID:522960|LOC522960:XM_002697500:188_cdna Constitutive 0 NULL GeneID:522960 23 GENE LOC522960 NULL similar to histone cluster 1, H2bk EMBV3_29064 TCCATTGGTCTGACTAGTGCTAAATGTTCCAATTTCAGAGTAAGGCAGAATATAACCTTC Gene GeneID:513667|KDM1B:XM_002697549:329_cdna Constitutive 0 NULL GeneID:513667 23 GENE KDM1B AOF1 lysine (K)-specific demethylase 1B EMBV3_28677 TGATGCTAGAAGACTGGGTAAGGAACTGGATTGTGTGCATCTTGGTAAGGCTTCCTCCCC Gene GeneID:507132|RBM28:XM_002686935:49_cdna Constitutive 0 NULL GeneID:507132 4 GENE RBM28 NULL RNA binding motif protein 28 EMBV3_30393 TCCAGTTCAAGACTCCTCCACTGTCACTGCGGCCCTGGCAACACCTACACAGAGATCTTT Gene GeneID:512743|LY6G6E:NM_001081520:96_cdna Constitutive 0 NULL GeneID:512743 23 GENE LY6G6E MGC148604 lymphocyte antigen 6 complex, locus G6E EMBV3_25305 TGGTGGAGACAGTGGGTTTCCATGGCAGCAAGAAGCGGAGCAGGGACCACTTCCGGAGCA Gene GeneID:509559|TSSC4:NM_001075410:257_cdna Constitutive 0 NULL GeneID:509559 29 GENE TSSC4 MGC139247 tumor suppressing subtransferable candidate 4 EMBV3_34265 CCCATGTGAATTTTACAGACACTGGGCTAAAAAGGGTATTCGGACACCTGGACACATTCC Gene GeneID:518739|ANO4:NM_001102050:1034_cdna Constitutive 0 NULL GeneID:518739 5 GENE ANO4 MGC159874 TMEM16D anoctamin 4 EMBV3_03918 TCGAGTGCTCTAGTCAAACAAATGTTGGGGGCAGGGACCAATAGTGTCTACAAGCTGTGG Gene GeneID:540194|C5H12orf41:NM_001024571:107_cdna Constitutive 1 NULL GeneID:540194 5 GENE C5H12orf41 C12orf41 FLJ20436 MGC133943 chromosome 12 open reading frame 41 ortholog EMBV3_12620 GCAGGAGAACTTCATCTTGGGCAGCTGTGGGACGTGAACCTGAAGATGCCCAGGAACAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31175 TTTAGCGACCACTGAACCCCATGCACCTGAGCTCCGCAACAAGAGAAAAGCCACCATGAT Gene BVV0102_236974 + 0 NULL GK000013.2:35065676-35088569 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045047 TCONS_00045049 TCONS_00045048 TCONS_00045050 1 XLOC_026335 Coding TCONS_00045050 XLOC_026335 NonCoding Coding LOC100335867 13:35079669-35128693 j TSS32962 1125 3 TCONS_00045050_3 56 0.283555555555556 5 0.977153580972197 0.0161745112585719 0.0100926155038496 0.0122099957391177 0.0122179891778984 0.0105745893477616 0.0046716248177802 0.00603950251484405 0.0046655237727056 0.00345827886127439 1.84206416612357e-08 1.38741090567098e-32 0 0.000363815336269867 0.000931731143524154 0.000413214508083709 0 0 9.74248559193699e-24 0.00968046784322915 0.0177180432224753 0.00632340741679497 2.3478390907793e-23 1.1743185293345e-105 0 0.00833628869670231 0.00768278448176027 0.00586871233493325 6.59585691295069e-06 1.2572496451399e-246 0 XM_005194877.1 SLC9C2 PREDICTED: Bos taurus solute carrier family 9, member C2 (putative) (SLC9C2), transcript variant X2, mRNA. 9e-34 149 72.98 0.250666666666667 NM_003174.3 SVIL Homo sapiens supervillin (SVIL), transcript variant 1, mRNA. 6e-11 73.4 77.78 0.0791111111111111 0 noncoding TAAAGCATCGGAAAATGGGGCGGGGCTTCGCGACAAGTGTTTCAACAAATCTCAGGTGGAGGTGGGCGGAGGATTCTGAGCAGCGAAAGTTAAGTATGAGAACCACTTGGGTTGGCGGGCGGAGAAAGGAAAGGTCTTTCGTCTAGACCCGCAGGTCGGAGGGTGACGTGACTTTCACAGTTGTGACTGGAGGGGCCAGGACGGTCTCCTTGACAGCCGGCTCGGAGCGCCTGTGACTACAAAGTTCGCACACCTTGTTGGGTTTTATCCCTGGATCGACTGGACACTCGGAGTTCCAGTTCCTGGTCTCTAAGCTGTGGCGACGGAGCTCCGGACAGACCCTCTTGAGCCCCTCGCCGAGAGCCAGCTCGCGCAAGGACCAGTGTTCCACGCCCCCGCCACCCTCGTCACCGCGGGGAACTCTGCGCCGGCGGCCGGCAGGCAGGTGGGCGAGCGCGCCGGCTAGATTCTAGCTACATCAGAAACTGGTCATTTTCTAAAACTAAAGGAGAAAACTAGGAAGGGGTGATGAATTCTTTCTGAGTTTCAAGTTACAAAATAAAACGAATCAATTAAAAGGATGTTGTCTCCAGAGGTCCCCATGCTTGGCACCCACAAGTGTGTTTTGATCTGGTTCCCCATCCGGCTCTGTACTGTTGCTCTTAAGATTGACTTGGAAGAAAGAGGGAGGAAAAGATGGAAAATAAGGGAGTTGATATCTTCCTGGAAGACACTGTAGATGTCAGCAGACTGAATTATTCCAACCAAAACAATACAAAGCCTTTTTTTAAAAAGTTAATTAATTGGACTTTCCTGGTGATCCAGTGGTTAAGAATCTGTCTTGCAGTGCCAGAGACACTGGTTTGATCCCTGGTCCTGGAAGATCTCACATGCCAAGGGGCAACTAGGCCCATCCACCACAGTTACTGAGCCCATGCTCAGGAGTCCTGGAGCCGCAACTACTCAGCCCACGTTTAGCAACCACTGAACCCCATGCACCTGAGCTCCGCAACAAGAGAAAAGCCACCATGATGAGAAGCCCGAGCACCCCAACCAGAGAGGAGCCCCTGCTTCTCTCCACAACTAGAGAAAGCCCACACACAGCAATGAGACCCCAGAACAGCC EMBV3_09745 CAATGGCTTCGAGACAACCAGAAGTGCCTGGTGGAGGAGGGAGAGCCCAGCGTCTCCCCG Variant GeneID:508617|MGC127874:NM_001034325:224_cdna 401^579 4 EMBV3_33028 GeneID:508617 10 GENE MGC127874 NULL hypothetical LOC508617 EMBV3_31291 ATCTGGAGCCTCTCGCCTCCCGTGACCTACAAATGGTTTCTGTGGCCAAAGTTTGCTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22076 GATGGACGGCCAGGAACTGATTTGCCTGCCTCAAGTCTTTGATCTCTTCCTCAAACACCT Gene GeneID:616289|LOC616289:XM_002699944:23_cdna Constitutive 0 NULL GeneID:616289 X GENE LOC616289 NULL similar to dachshund-like protein DACH2 EMBV3_27787 TGGCCACCATCTGGGGGAAAAACCTGTCCTGCGGATGGTGACTGCAGCCATGAAATTAAA Gene GeneID:539042|LOC539042:NM_001098098:19_cdna Constitutive 2 NULL GeneID:539042 15 GENE LOC539042 NULL similar to ADP-ribosyltransferase EMBV3_15228 AAACCCTGTGCTCTTCTCACTGGGAAAAGGGCCATCATGATCGGGGATGACATCGTGGGT Variant GeneID:534183|LHPP:NM_001080912:48_cdna 524^680 3 EMBV3_33632 GeneID:534183 26 GENE LHPP NULL phospholysine phosphohistidine inorganic pyrophosphate phosphatase EMBV3_26933 TAAAGTTTTATGAATGTGAGTCTTTGTTTTTGAAAATTGCTTGTAATTCCTGGCATCCAA Gene GeneID:100337273|LOC100337273:XM_002698862:448_cdna Constitutive 1 NULL GeneID:100337273 28 GENE LOC100337273 NULL hypothetical protein LOC100337273 EMBV3_07014 GGGAAGAGGGTAGTCAGACCATTGTGGAAGAAACCTCACCATCAACAGCAACAAATTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08248 GCTCCATGGCTCTTTGAATTATGCTGTTGAGTGCTGACTGTGTGTTCTACTGAAGGAGTA Gene GeneID:534358|UTRN:XM_002690294:26_cdna Constitutive 0 NULL GeneID:534358 9 GENE UTRN NULL utrophin EMBV3_19175 TTGGTCCCCATCTCTCACGGAAGGGACTGGCATAGAAGGGCTGCAGGGCAGTGATTAGGA Gene GeneID:509801|LOC509801:XM_002696068:400_cdna Constitutive 1 NULL GeneID:509801 19 GENE LOC509801 NULL similar to CD79B antigen EMBV3_17309 GACAGGCAGTTTCTCCTTTCGGTTCCATTTCAGACATTGGCTAGAGCTGAAGGGCAGGGT Gene GeneID:525510|LOC525510:XM_002695046:374_cdna Constitutive 2 NULL GeneID:525510 18 GENE LOC525510 NULL similar to F-box protein 27 EMBV3_28171 GCTGCTTGCAATAAGGAGTTGTCCAGCTAGAGAAGAGGCAAGACTATGTCTGCAATCCAC Gene GeneID:540735|ZC3H13:XM_002691780:382_cdna UTR3_Alt 2 NULL GeneID:540735 12 GENE ZC3H13 NULL zinc finger CCCH-type containing 13 EMBV3_09933 TCCAGTAATGAAAACTAGGCAAAGTAGCAGACGCTTGGCTTCTCCACCGTTAGTTCAGCC Gene GeneID:512648|ELL3:NM_001046126:226_cdna Constitutive 0 NULL GeneID:512648 21 GENE ELL3 MGC137603 elongation factor RNA polymerase II-like 3 EMBV3_34770 CCAAGGAGGTAAAAGACCGGTACACTGAGAAGTATAAGACATTGATGAAAGAGCCTAAAG Gene BVT0102_101266 + 0 NULL GK000028.2:36027012-36051346 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23131 GCAGCACTGAACCTAACCACAAGCAGCATTGGGAGCATCAGCATGTCTGTGGACATTGAT Gene GeneID:532938|ARID3B:XM_002696636:185_cdna Constitutive 0 NULL GeneID:532938 21 GENE ARID3B NULL AT rich interactive domain 3B (BRIGHT-like) EMBV3_43078 CTGGTGTGGCGTGCCATTGCCTTCTCCAGAAATCATACTAGGTGTTAAGATTTGGTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36027 CGGTTGTACGCGCAGTCTGCCCAGTCGGATAGGCCTTGTAGAGAAGAAAGAAATGGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17445 GACCTAGAACCAACATTTTTAACAAATTCCATTTCTGATTCTGATTCAAGTAGCTAGCTG Gene BVT0102_391402 - 1 EMBV3_22448 GK000007.2:102086618-102227148 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25504 GCAGCTTCTACTACCAGCCCTTGGGGCACTCACCCTTGTGCTCAAGCAATCATTGTCAAT Gene GeneID:505780|GPBP1L1:XM_002686421:383_cdna Constitutive 0 NULL GeneID:505780 3 GENE GPBP1L1 NULL GC-rich promoter binding protein 1-like 1 EMBV3_01339 GAGGGAAGGGCCTCTAGGGAACTCTGCACTTTCTATACCTTTGTACTATGCACTGCCCTA Gene GeneID:532751|PTPRD:XM_002689593:5_cdna UTR3_Alt 2 NULL GeneID:532751 8 GENE PTPRD NULL protein tyrosine phosphatase, receptor type, D EMBV3_14958 GACCTACCATCAGCCTCTTAAATGAGCAAGCAGAAACTTGTGAAACAGTTGCCTTTAACT Variant GeneID:615965|TATDN3:NM_001080320:117_cdna 498^610 1 EMBV3_15909 GeneID:615965 16 GENE TATDN3 MGC155057 TatD DNase domain containing 3 EMBV3_41908 TCAGGGTTGGTGTAGGGTGTTGCCTCCTGTTTGTTTCAGCTGCACATGGCAATGCATCCT Gene GeneID:533435|LOC533435:XR_084537:254_cdna Constitutive 0 NULL GeneID:533435 7 PSEUDO LOC533435 NULL similar to BTB (POZ) domain containing 2 EMBV3_39279 ATCTGGTCAGCAAATTGAAACTCCCCAACAATGGGAGGGTGCGTGGCAGAAGGGGTTTAC Gene GeneID:781489|LOC781489:XM_002700317:32_cdna Constitutive 0 NULL GeneID:781489 X GENE LOC781489 NULL similar to melanoma antigen 2 EMBV3_40642 TTCGGAGGCTACGGATGTGGCTCTGGTTTCAGAAGCTTTGGCTACAGATGTGGCTCTGGT Gene GeneID:100296266|LOC100296266:XM_002684606:68_cdna Constitutive 0 NULL GeneID:100296266 1 GENE LOC100296266 NULL hypothetical protein LOC100296266 EMBV3_32884 GTGTCGCGTGCAGACAGGAACTCTGCAACGTCAAGGTGGTGCTTCTTAACATTCCTCGTT Gene GeneID:533184|TTYH2:NM_001105626:428_cdna Constitutive 0 NULL GeneID:533184 19 GENE TTYH2 MGC139393 tweety homolog 2 (Drosophila) EMBV3_34971 CACCACAACAGAGATGGAGAGCAAAAGCCCAAGAGAGAATCCGAGAACTCAACAAGCCTC Gene GeneID:282660|MGP:NM_174707:11_cdna Constitutive 0 NULL GeneID:282660 5 GENE MGP NULL matrix Gla protein EMBV3_14051 AGAAGAGCAGCGACACTTGTAACCCACTATCAGGCGCCTTCTCAGGAGTGTCCAACATCT Gene BVV0102_422937 + 1 EMBV3_13894 GK000004.2:114262316-114329662 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31534 ACGTACAGCCCGGGAACTACATCCTCAAGGTGCATGTGAACCCAAAGTACATCGTTTTGG Gene GeneID:281903|LOXL1:NM_174383:10_cdna Constitutive 0 NULL GeneID:281903 21 GENE LOXL1 NULL lysyl oxidase-like 1 EMBV3_30775 AACAGGACAATGTACTTCATTGGTGTATATCATTTACTTTTTACCTGGCTACACTTTAGG Gene GeneID:539858|RB1CC1:NM_001114155:44_cdna Constitutive 2 NULL GeneID:539858 14 GENE RB1CC1 KIAA0203 RB1-inducible coiled-coil 1 EMBV3_36182 GGCCATCAGCAAGAAGTTTGGAGACATGAGGAATTCTCCTACTTTCAAATCATTTGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33005 GTGCGGGAGCAGCAGGCACAAGTGGAGAAAGAAGACTTTAGTGACATGGTGGCTGAGCAT Gene GeneID:531931|SF3B2:NM_001103271:54_cdna Constitutive 0 NULL GeneID:531931 29 GENE SF3B2 MGC140574 splicing factor 3b, subunit 2, 145kDa EMBV3_31022 AGCTGCTTCCATGTTAGTGCATGCTGAGTAGATTAGCTCCAAGGATGGGAGACTGGGACA Gene GeneID:100126444|PCP4L1:NM_001110445:178_cdna Constitutive 0 NULL GeneID:100126444 3 GENE PCP4L1 MGC151618 Purkinje cell protein 4 like 1 EMBV3_01399 GTCCGAGAGACAGGCGCTGCGAGATGGAGACAGCGTGCGGCGCGAGGTGCACTCCTACCT Variant GeneID:526256|MGAT4B:NM_001103261:28_cdna 296^487 2 EMBV3_16485 GeneID:526256 7 GENE MGAT4B MGC152320 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B EMBV3_13924 TGCCACCATCCTGTCCCGTCGTATTGCTGTGGAATACAGTGATTCAGAAGATGATTCAGA Gene GeneID:531488|WASF1:NM_001034017:47_cdna UTR3_Alt 2 NULL GeneID:531488 9 GENE WASF1 WAVE1 WAS protein family, member 1 EMBV3_17205 AATAGCTGCTGAGGAAGTCGAGCGACAGGATGCGCCCTCCTATGGTAACTATGCTTTGTT Gene BVT0102_041178 - 1 EMBV3_21826 GK000002.2:42444577-42762912 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105147 1 XLOC_062512 NonCoding TCONS_00105147 XLOC_062512 NonCoding NonCoding - 2:42597365-42598015 - TSS77675 289 2 0.557781201848998 0.000753257201530986 0.00125170727498713 6.40415337323478e-05 0 5.12509770797666e-05 0 0.000221967846664126 0 0.00032761756513866 0 0 0 0 0 0 0 0 0 0.000818826913448815 0.000174187019958191 0 0 0 0 0.000479480105303014 0.000146272648718368 0.000263560795943191 0 0 0 0 noncoding 0 0 0 0 -0.047879725149317 0.657161769152911 0.00956534483812257 0.850240706216039 CTCTAGGACTATGGCATTCATTTCCCAGCAACTGGGAATGTTGGTGGCTAACTTCTCTCAGGGAACCCAGCCTGTGACAGTGGCACACTGGTCTGAACAATGACTACTTATGTCTTTCTGACAATCAGGAAGTCAAGACTATAACATTGCTCTGTTGACTTATTAACAAAGCATAGTTACCATAGGAGGGCGCATCCTGTCGCTCGACTTCCTCAGCAGCTATTTGTCTACTGATTTTACTGTTTTCTCTAATGAAAGCCCACTGCCACAAATGATTTGTTCACTTTGT TCONS_00105132 s 5' 109049 TCONS_00105132 s 5' 109276 EMBV3_03750 CAGATGGCTGTCACTGTCTGGATCACTGGTTTTTTCCATGCCCTGCTGCACTCAGTAATG Gene GeneID:785858|LOC785858:XM_002697406:94_cdna Constitutive 0 NULL GeneID:785858 23 GENE LOC785858 NULL similar to olfactory receptor, family 12, subfamily D, member 2 EMBV3_18559 GCTGTGTCCTCAGTTGACTCATTCACTCAGGTATGAAAACTTTCAAAGACGACTAGCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01677 TAGGAATCTCCACACTGTTCTCCATAGTGTCTGTACTAGTTTGCATTCCCACCAACAGTG Gene BVV0102_298933 + 1 EMBV3_15694 GK000002.2:46412627-46648516 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165968 TCONS_00254150 TCONS_00001581 TCONS_00123391 TCONS_00175573 TCONS_00206719 TCONS_00056148 TCONS_00232319 TCONS_00254633 TCONS_00047541 TCONS_00135550 TCONS_00057034 TCONS_00185779 TCONS_00233166 TCONS_00125552 TCONS_00153182 TCONS_00098380 TCONS_00062995 TCONS_00071486 TCONS_00202657 TCONS_00205487 TCONS_00116823 TCONS_00149577 TCONS_00166732 TCONS_00071497 TCONS_00208544 TCONS_00063105 TCONS_00091358 TCONS_00071481 TCONS_00102423 TCONS_00200342 TCONS_00091607 TCONS_00252947 TCONS_00149427 TCONS_00199614 TCONS_00020070 TCONS_00209024 TCONS_00232225 TCONS_00201763 TCONS_00072392 TCONS_00055783 TCONS_00179469 TCONS_00222117 TCONS_00220566 TCONS_00199552 TCONS_00187370 TCONS_00055785 TCONS_00249330 TCONS_00055781 TCONS_00253253 TCONS_00204640 TCONS_00240217 TCONS_00202656 TCONS_00200691 TCONS_00032802 TCONS_00238992 TCONS_00108242 TCONS_00157489 TCONS_00147917 TCONS_00251001 TCONS_00252524 TCONS_00117402 TCONS_00125240 TCONS_00039851 TCONS_00130090 TCONS_00001575 TCONS_00156830 TCONS_00205486 TCONS_00180508 TCONS_00152671 TCONS_00206300 TCONS_00230487 TCONS_00158500 TCONS_00091328 TCONS_00141846 TCONS_00002942 TCONS_00177964 TCONS_00249775 TCONS_00177242 76 XLOC_100808 XLOC_157088 XLOC_000393 XLOC_074945 XLOC_105354 XLOC_125240 XLOC_033951 XLOC_141804 XLOC_157565 XLOC_027674 XLOC_081773 XLOC_034835 XLOC_111832 XLOC_142648 XLOC_077094 XLOC_092947 XLOC_058626 XLOC_037722 XLOC_043257 XLOC_124016 XLOC_124664 XLOC_070989 XLOC_091451 XLOC_101568 XLOC_043268 XLOC_127057 XLOC_037832 XLOC_056133 XLOC_043252 XLOC_061863 XLOC_121994 XLOC_056381 XLOC_155888 XLOC_091303 XLOC_121267 XLOC_010748 XLOC_127535 XLOC_141711 XLOC_123408 XLOC_044161 XLOC_033591 XLOC_109242 XLOC_135426 XLOC_133883 XLOC_121205 XLOC_113417 XLOC_033593 XLOC_152273 XLOC_033589 XLOC_156194 XLOC_124496 XLOC_146881 XLOC_122343 XLOC_019039 XLOC_145658 XLOC_064150 XLOC_095944 XLOC_089803 XLOC_153944 XLOC_155465 XLOC_071568 XLOC_076782 XLOC_023668 XLOC_078801 XLOC_095290 XLOC_110275 XLOC_092436 XLOC_124877 XLOC_139977 XLOC_096954 XLOC_056103 XLOC_086273 XLOC_000741 XLOC_107737 XLOC_152718 XLOC_107016 Coding TCONS_00204640 XLOC_124496 Coding Coding - 6:20413972-20418826 - TSS153051 3148 2 TCONS_00204640_9 130 0.306543837357052 2 0.351741191015866 0.148505195416181 0.126002462205398 0.136800279474487 0.0993590771190472 0.130133882119036 0.0480536066423031 0.0760458575472801 0.114515044727616 0.17750770940019 0.0218214825413354 0.00281132127368957 0.00379017950592231 0.0240202229194392 0.0529367491886849 0.0398083188833594 0.0009935021033482 0.00224579179507347 0.0010368162934631 0.0998810081179903 0.0877740241495524 0.0433217597661745 0.000903736109012594 0.000777381793498529 0.00127469500945967 0.123708491525303 0.0914770614046789 0.0894469428108921 0.00130516825875574 0.00102207187226357 0.00196589778498949 XM_005203639.1 TPM3 PREDICTED: Bos taurus tropomyosin 3 (TPM3), transcript variant X14, 0.0 2928 90.58 0.64707750952986 NM_153649.3 TPM3 Homo sapiens tropomyosin 3 (TPM3), transcript variant 2, mRNA. 0.0 2233 83.14 0.64707750952986 TCONS_00204640_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-35 131 59.81 0.971698113207547 0 noncoding 1 1 1 1 -0.859087928639218 0.00683989089552069 -1.06405010848439 3.52673399974048e-05 ACTCAAAAAATGGGCCAAAGAACTAAATAGACATTTCTCCAAAGAAGACATACAGATGGCTAACAAACACATGAAAAGATGCTCAACATCACTCATTATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATTTCACGCCAGTCAGAATGGCTGTGATCCAAAAGTCTACAAGCAATAAATGCTAGAGAGGATGTGGAGAAAAGGGAACTCTCTTACACTGTTGGTGGGAATGCAAACTAGTACAGCCACTATGGAGAACAGTGTGGAGATTCCTTAAAAACCTGGAAATAGAAATGCCATACAACCCAGCAATCCCACTGCTGGGCATACACACTGAGGAAACCAGAACTGAAACAGACACGTGTACCCCAGTGTTCATCACAGCACTGTTTATAATAGCCAGGACATGGAAACAACCTAGATGTCCATCAGCAGATGAATGGATAAGAAAGCTGTGGTACATATATACAATGCAATATTACTCAGCCATTAAAAAGAATACATTTGAATCAGTTCTAATGAGGTGGATGAAACTGGAGCCTATTATACAGAGTGAAGTAAGCCAGAAAGAAAAACACCAATACAGTATACTAATGCATAGATATGGAATTTAGAAAGATGGTAATGATAACCCTGTATGGGAGACAGCAAAAGACACACAGATGTATAGAACAGTCTTTTGGACTCTGTGGTGGAGGTGGGGGATGTTTTGGGAGAATGGCATTGAAACATGTATAATATAAGAAACGAATTGCCAGTCCAGGTTCGATTCAGGATACAGGAAGCTTGAGGCTGGTGCACTGGGATGACCCAGAGGGATGGTACCGGGACGGAGGTGGGAGGGGGGTTTCAGGATTGGGAACATGTGCACACCGTGGCGGATTCATGTTGATGTATGGCAAAACCAATACAATATTGTAATTAGCCTCTAATTAAGATAAATAAATTAAAAAAAAATAAAGAGATTGTCATATTGGATTTATTTATTTTGGAGGGACTGGTTATTTCAAAAAGACATTTATCAATTTTCAGTATCAAAACAGTTACACTATTGGTTTTTTTTCTCCCAATTGGTCCCCAAAGAGACCACACCAAAGGAGAGGACATTTTAAGCCAATTAAGCTGCAGGATGCACCCCTAACAGACCTCACTGAAACCTCATCAAAAAAGGGGGATTGGGTAGGGAAAGAAACTTTAAAAGATCAGCACACTGCTAGCCCACAGACTGTAGAGAGCTCTCACAGGCAGAGGGGTGACCAGTTTGCCTCAACCCCAAAGAAGCAAAGTTCCAAAATATAAAAATTTACAAGTTTTGTACATACGCTTTTCAAGATTTCTCCAGCACTAACCAATACAAAGCACAGTGAGATGGCACTTTTAGAGACAGCAGCTTCAGACCCAGAAAAGGGTGATGAGATGAGTTTCATATGGCTAAATCAGTGGCAAAACATAATTTTCTTTCCTTTCTTTCAAGGAGGCAGGAGAGCAAATAAGTGGTCACTTCAATATAAGGGGCACATGATCCATTAGTAGTTGGGAACAGGGTAGAGCTGGGACAAGGATTTGGTCTCAGAGGTTTTACCATCTTAATTGTTTGGTCACTTCTGATGAAAAAAGAAAAAAAAAAAGTTGTCCAAAGATACCGTAAAGCTGAAAACCTGAACAGCACTTTTTTTTGGCTAACTCCTTCTGGAATCATCTTTCTGCTTTGGCAGGTACTTTTTACAGGGCAATGAGGTTTCCCCAAATGGAGCCTTTCTCTGGGCTGCTAGGCTCTCAGTAAGGCAGGCCCAAACCTTTTCCCTTTCTCTCTGGAGAAGGCAATTAAGCTGAAATGTTACCTTCCAAAAGTGAGAAAGGGATTAGACTGCTGCTTCAGTTCTACGGAATTATCTGGAATGTTTTTTTACAAATGGTTGTAACATCAAGAACAAAAAAGGTAATTACAAAATGTGTACATCACAACATGCTTTTAAAGACACTTTGCATTGTGCTCACATTCCCTTAAACGTTGTTCCCAAAGGTGCTCAGCCTCTAGCCCACCTGGAATCTCTGGGGAGAAGCAGAGACTGGCGAAAAGGACACAGGAGTAGGGGGGTGGTCAGCTTCGGGCAGGCTGGCCCCAGTGGAGTCGGAGTCGGGGTGAGAGGGAGGAGCAGCGGCAGGGCGGGGCTGGGGTGCTCTACATTTTATTCAGGTCAAGCAGAGTCTGGTTCAGCATCCTTTGTGTACAGAGGTCCTCCTCTTTGGTGCATTTCAGTTTATCTTCCAAATCATCAATTGTCTTTTCCAGCTTGGCTACTGATCTCTCAGCAAACTCAGCACGAGTCTCTGCCTCCTTGAGTTTTTCGGTAAGAATCTTTATCTCTTCCTCATATTTGTCTTCCTTTTGAGAGTACTTTTCTTCAGCAGCACTCAGACACTTCAGGTGCTGGTCCATCAGTCTGATTTGCTCACCCATCTTTCGGCAACGGGACTGTGCCAGCTCCGCTCGCTCCTCTGTGCGCTCCAAGTCTCCCTCAATAATCACCAACTTGCGAGCCACCTCTTCATACTTCCTGTGTGCCTCTTCTGCAATGTGCTTAGCTTCTTTGAGTTGGATTTCCTGGAGTTCCATTTTTTCTTCATCTTTTAAGGCTTGGTTTTCAATAACCTTCATAACTCTCTCGCTCTCATCAGCAGCTTTCTCAGCTTCCTCCAGCTTTTGCAGCGCAGTGGCCAGGCGCTCTTGAGCTCGGTTCAGCTCCTCTTCAACCAGCTGGATCCTACGGTTTAAGGAGACCACTTCAGCCTCAGCCTGTTCTCGGGCCCATCTTTCTCCATCCACTTTCTGCTGGAGGCGCTTGGCCCTCTCCTCTGCATCATCGGCCTGCTGCTGCAGAACCTGGATCTTGCACTTCATTGCCTCGGTGACAGCGATCGCGGCCATGACAGTGGTCCCGGCCATGGTCCCCACCCAGCTCCTGCTTGCCTTCGGGTTCCTGCCTCCTCCGCTCGGCGCTCGGCGTTGCAGCCGCTTCTCACCCAGCTTGGTTCCTGCAGGGTTGAACTTGTGGCCCACACTAGGCGAAGAGCATGCACAGTCAAAGCTGACAGTAGGAAGCTTGGGATACTTAGGAATGGTGGGTTGCAGTTTATGGGGT TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 35715 TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 30976 EMBV3_31327 TGCTGTCTATACCCTGCCCTCTATTATCTTCACCATCAACGGCATCAACTACCCAGTGCC Gene GeneID:337899|PAG5:NM_176616:120_cdna Constitutive 0 NULL GeneID:337899 29 GENE PAG5 NULL pregnancy-associated glycoprotein 5 EMBV3_08903 AGGACTCTTCCAGTCGTGGGCACACGAAGGACCTGTACTCTGGCTGGCTGGCGGAAGCCC Variant GeneID:282218|DNASE2:NM_001075127:8_cdna 494^856 3 EMBV3_09924 GeneID:282218 7 GENE DNASE2 MGC140819 deoxyribonuclease II, lysosomal EMBV3_40985 TTCATCTCCTAGGCTCGTTCTCGGTTCTGCTGGCAAGGATGGTCATAATCAGCAACTCAG Gene GeneID:512397|LOC512397:XM_002692387:302_cdna UTR3_Alt 2 NULL GeneID:512397 13 GENE LOC512397 NULL similar to Uncharacterized protein KIAA0552 EMBV3_41921 AAATTCAGTATATTGTTGTAAAGACCTATGTGTTCTGGACCATCAATGGAGCCTACAATT Variant GeneID:617161|IMMP1L:NM_001079627:65_cdna 204^337 2 EMBV3_18379 GeneID:617161 15 GENE IMMP1L NULL IMP1 inner mitochondrial membrane peptidase-like EMBV3_24454 GACCGGAAGAACTGACAAACCAGATGAACCAGATAGAAATAAGCATGCAACATGAACAGC Gene GeneID:509329|HAT1:NM_001034347:219_cdna Constitutive 0 NULL GeneID:509329 2 GENE HAT1 MGC143122 histone acetyltransferase 1 EMBV3_28189 GACAGCAGCCTCAAGAAGTGTCACCAGAGGGCACCAGAGACCCTCCTCTTAAGCAAAATA Gene GeneID:527084|CCDC77:NM_001102106:34_cdna Constitutive 1 NULL GeneID:527084 5 GENE CCDC77 MGC157228 coiled-coil domain containing 77 EMBV3_20826 TTCACAGCCTACCTGTGTACATACTAATTACTTATTAGATACTTGTCTGTCTTATGCTGG Gene GeneID:512490|STXBP3:NM_001083415:86_cdna Constitutive 0 NULL GeneID:512490 3 GENE STXBP3 MGC154985 syntaxin binding protein 3 EMBV3_26646 TTCCCAGGGCATTTAACCAGCCAATCAGAACAGCACATCCTTTAGGGGAGATAACCTGGC Gene GeneID:505511|AHCYL1:NM_001101052:59_cdna UTR3_Alt 2 NULL GeneID:505511 3 GENE AHCYL1 NULL adenosylhomocysteinase-like 1 EMBV3_12641 CTTGGGCTGCATATCTCCCTGGCTCTGTTTAGAAGGAGAACAAATTCTGGAGGGTTTCCC Gene GeneID:616041|MAP7D2:XM_002699627:31_cdna Constitutive 0 NULL GeneID:616041 X GENE MAP7D2 NULL MAP7 domain containing 2 EMBV3_27209 TGTCTCATCCTCACCAACATTCTTCAAATCAAGTCCACGGAGGGCAGGTCCAAAGCCTTC Gene GeneID:787625|LOC787625:XM_002699170:64_cdna Constitutive 0 NULL GeneID:787625 29 GENE LOC787625 NULL similar to olfactory receptor Olr1242 EMBV3_11182 TCACCCCCGAGCGGCTGCGTCCTCCAGTGGGGTTTGTGGTGGGTCATGCTGGTCTGCTTC Variant GeneID:617865|SLC12A9:XM_002698203:758_cdna 109^331 1 EMBV3_11908 GeneID:617865 25 GENE SLC12A9 NULL solute carrier family 12 (potassium/chloride transporters), member 9 EMBV3_42575 TGGTAAAGAGGGTGGTTCTCAAAAGTGATCTTGGACACATGGTGATGAGGCTGTGGAGCC Gene GeneID:100139319|LOC100139319:XM_002691510:494_cdna Constitutive 0 NULL GeneID:100139319 11 GENE LOC100139319 NULL similar to Tudor domain-containing protein 6 (Antigen NY-CO-45) (Cancer/testis antigen 41.2) (CT41.2) EMBV3_01466 TGTGGTTGACCAGCAGCCCAGTGTTAAGCAACCTCAACAAGAGAAACCGCCAGCTGAGAT Gene GeneID:100299005|LOC100299005:XM_002683867:5_cdna Constitutive 0 NULL GeneID:100299005 X GENE LOC100299005 NULL similar to X antigen family, member 5 EMBV3_41489 ATGAGCCAGTGCTGATAGAAATCCTGGTGGAGGTGATGGACCCTTCCTTCGTGTGCTTGA Gene GeneID:281433|PSAP:NM_174161:215_cdna Constitutive 0 NULL GeneID:281433 28 GENE PSAP MGC128268 prosaposin EMBV3_42053 GTTGCACCTGGGGCCCCGAACCGAAGCCAGAACCTGCTCTGTCGACATCCACTTTCTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35476 GGACCAGGGCACATGCCTGTTGCTCACAGAAGTGGCAAAGAGACAAGAAGGATATGTGTA Gene GeneID:286791|BDA20:NM_174761:2_cdna Constitutive 0 NULL GeneID:286791 X GENE BDA20 NULL major allergen BDA20 EMBV3_37050 GCCTGCTGTCTCACGCTGTTCGCAGAGTTCAAAATGCTAACCACATGGCGAATTCCTGTT Gene GeneID:404143|GHITM:NM_001034052:254_cdna UTR3_Alt 2 NULL GeneID:404143 28 GENE GHITM MGC127644 growth hormone inducible transmembrane protein EMBV3_07772 GATCAAGTTCCAGATGAAGAAGGTGCTGTGTCTGGCAGTGGCTGTTGGCCACGTGAAGAT Gene GeneID:781650|LOC781650:XM_002684948:200_cdna Constitutive 0 NULL GeneID:781650 1 GENE LOC781650 NULL similar to ribosomal protein L10a EMBV3_06842 TAGAACCCAAAGTCGGAGAAGCAAACCGTTTTCGGGGCTCACTCCACAGACCACCTTAAA Gene BVT0102_240719 - 0 NULL GK000001.2:145555781-145597291 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16077 TGTTCGAGGACGAGCAGGAGGAGTTTGTGTGCAACACTCTGCAGCCTGGCTGTCGCCAGA Gene GeneID:616824|GJD3:XM_002695967:297_cdna Constitutive 0 NULL GeneID:616824 19 GENE GJD3 NULL similar to gap junction protein, delta 3, 31.9kDa EMBV3_21890 GTGGTTGGAGGAAGGCCAGGGTCTGGCTGGACATAAAGCATGGACATGTAACAGAATGGA Gene BVT0102_109192 - 1 EMBV3_43547 GK000019.2:42856641-42877796 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41927 GGAGATAAACAGGTGTCCTTTAAAAATCACAGGCTGGTGGAGTTGAGGGAAAGAGGCCCA Gene BVT0102_117137 - 0 NULL GK000001.2:79250617-79774991 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38775 GCATGTTAAAGTCAACCTGCACATGCTTCTTTGGTTACAAGGACTAAAAAACTAAAAAAA Gene GeneID:614406|SYTL2:NM_001102278:38_cdna Constitutive 2 NULL GeneID:614406 29 GENE SYTL2 MGC151530 synaptotagmin-like 2 EMBV3_41227 ACATCCTGGAGCCCGATGCACCGGAGCCAGGCGCCTGCGGCAGCCTGAGCCCAAAACCCT Variant GeneID:513939|GSDMD:NM_001046160:89_cdna 485^677 1 EMBV3_03613 GeneID:513939 14 GENE GSDMD GSDMDC1 MGC137804 gasdermin D EMBV3_30574 GGATGTGCTGTACTGTTTGAAGTGACTGTTCTGTGAAGAGAGGACACGACTAGGTCTGAC Gene GeneID:507517|TKTL1:NM_001045972:43_cdna UTR3_Alt 2 NULL GeneID:507517 X GENE TKTL1 MGC134374 transketolase-like 1 EMBV3_24013 CGACCTCCCTTCTGAGAGTCAAAGAAGCATACCACTTGCTGTGACTGATGCGTTAGAGCA Gene GeneID:525136|WDR51B:NM_001099031:38_cdna UTR3_Alt 4 NULL GeneID:525136 5 GENE WDR51B MGC139093 WD repeat domain 51B EMBV3_09558 TCGGCAATGGAACCCAGATTTACGTCATTGCTAAAGAAAAGAAGCCCTCTTACTACAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37036 AATCGTCTGATCCGCCGCTCGAAACTGTGGTGTTACGCGAAAGGTTTTGCCCTCGACACT Gene GeneID:100296460|LOC100296460:XM_002695949:389_cdna Constitutive 0 NULL GeneID:100296460 19 GENE LOC100296460 NULL hypothetical protein LOC100296460 EMBV3_12180 GGGGCCCCAAATCAGAAATTGGGCAGGGTTGGGGTGAAAAGTACACATTGTGCTTGCTAT Gene GeneID:525318|MAGEE2:NM_001076876:7_cdna Constitutive 0 NULL GeneID:525318 X GENE MAGEE2 NULL melanoma antigen family E, 2 EMBV3_05283 GCAAAGCAGATTATCTTCTGTTCTTTTGCATAGCAATCAGAGTTGAAGTTTGTTTGCTAC Gene GeneID:540859|TCEB1:NM_001046493:61_cdna Constitutive 0 NULL GeneID:540859 14 GENE TCEB1 MGC137138 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) EMBV3_06468 CATGTCCATGAAGGAGGTGGACGAGCAGATGCTCAACGTGCAGAACAAGAACAGCAGCTA Gene GeneID:539149|TUBB2C:NM_001034663:80_cdna Constitutive 0 NULL GeneID:539149 11 GENE TUBB2C MGC128183 TUBB2A tubulin, beta 2C EMBV3_03072 AAAGCAGCAAGCGATTCTGAGATGTTCCCCTGTCTCTGGACACCTCTCCGTGTACTGGTA Gene GeneID:100297154|LOC100297154:XM_002707815:357_cdna Constitutive 0 NULL GeneID:100297154 4 GENE LOC100297154 NULL hypothetical protein LOC100297154 EMBV3_25892 CTGGACTTGGCAGATGACTTGCTGTCGGACGTCTTCACCACCATCGGTTCAGTGACATTA Gene GeneID:520406|CRB1:XM_002694270:274_cdna Constitutive 0 NULL GeneID:520406 16 GENE CRB1 NULL crumbs homolog 1 (Drosophila) EMBV3_41194 CCAAGTCAAAGAGAAGGAAGAAGCCACAATGAGAAAGTAGGGGGTGAGAAGTTAGGTGGG Gene BVV0102_343990 + 1 EMBV3_08808 GK000001.2:47305083-50157888 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43525 TGTCATCTCCTACATGAGAATACTCCAAGCTGTCTTCAGCCTTCCTTCTCGGGAGGCCAG Gene GeneID:616261|LOC616261:XM_002693161:96_cdna Constitutive 0 NULL GeneID:616261 15 GENE LOC616261 NULL similar to olfactory receptor 670 EMBV3_11997 AGGGATCGTCCCGGTGCCACTTGAAGAAAAGCTGACTTCCTTAGGGCCACTTGGTAATCT Variant GeneID:615431|MRPS6:NM_001040584:55_cdna 481^669 1 EMBV3_25912 GeneID:615431 1 GENE MRPS6 MGC128347 mitochondrial ribosomal protein S6 EMBV3_36061 TGGCATAACAAATTCTGAATGCAAGGACTAAGATTGTTTGCCCCTTGAATGCTACCCAGG Gene GeneID:538618|ENDOD1:NM_001102519:20_cdna Constitutive 1 NULL GeneID:538618 15 GENE ENDOD1 MGC157305 endonuclease domain containing 1 EMBV3_17512 GGTTTTGTAATCTGAGGCATCTTTGAGTCTGTGCATTTGGAGGGAGGGTGGTATAGGAAG Gene BVT0102_127684 - 1 EMBV3_17150 GK000002.2:22139879-22243525 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06773 AGGGGACATAAAATTAGTGATTACTTTGAGCGGCGAGTAGAACAGCCTCTCTATGGTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02231 GTTCTCACCACGTGCCGCTGACCTGCTTGTCCTTTTCTCAGACATTTTCCTTCTTGCTTC Gene BVT0102_176807 + 0 NULL GK000019.2:39265056-39351740 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12987 TTACCAGATGGAAGAAGTTAACTGCATGATGACCATGAGCAGGGAGCCCCCACACCATCT Gene BVT0101_034166 - 1 EMBV3_14769 GK000012.2:76735456-76758753 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037292 TCONS_00037297 TCONS_00037286 TCONS_00040938 TCONS_00037299 TCONS_00037295 TCONS_00037296 TCONS_00035680 TCONS_00035675 TCONS_00035674 TCONS_00037294 TCONS_00035679 TCONS_00037293 TCONS_00037300 TCONS_00035676 TCONS_00035678 3 XLOC_021352 XLOC_024750 XLOC_020968 Coding TCONS_00037299 XLOC_021352 Coding Coding - 12:76724494-76742065 - TSS26948 5826 4 TCONS_00037299_8 113 0.617919670442842 5 0.668696642003415 0.00108607240391426 0.000584485779713726 1.86850561954068e-07 0.000519542362725803 0.0002411271233417 0.000174010683895097 0.000558189080895581 0.000479976911683683 0.00051400066000886 4.91305130994023e-05 3.62407368134271e-05 1.8669102568165e-08 1.4149919261787e-05 0.000155254192711607 0.000779379848666674 4.34291143949694e-09 0 9.10659895062794e-12 0.000712300154702628 4.242386186706e-09 4.98729222661059e-14 0 0 0 0.000894661175010931 0.000862501053245715 1.71028895819655e-08 1.21022019523332e-05 4.45081679445472e-10 1.53948527502752e-24 XM_003585566.2 LOC100336232 PREDICTED: Bos taurus multidrug resistance-associated protein 4-like (LOC100336232), partial mRNA. 3e-105 389 90.18 0.0487469962238242 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 1e-122 446 66.79 0.277548918640577 TCONS_00037299_4 sp|O15439|MRP4_HUMAN MRP4_HUMAN Multidrug resistance-associated protein 4; 5e-50 172 80.85 0.939393939393939 0 noncoding 1 0 1 1 -0.388417805223429 0.0410679342779144 0.0367615125835988 0.563767249355537 ACAAATTTTGATCTTTCTTCATTTAGGGTGGAAGGGAAGAAAACTGCTGAGCTGGTAAGATGGCCACACAAATAGCTACACACTTATGGGTGGGAGCCCAACGTTTTGTTCATTCAGTCCTGCAGTCATTCATTCATTCAAACAGCACATTCTAGGCAGTTTTGCTGCACACTGTCCATGCACCAGTGAGATAGTCATGCTGGACTTGGGCTTGAGTCCAAATCAGGATTCATCACTTACTGATTCAAAGACCCTGGACAGATGCTGTCCTTGAGCCTCATCTTTCTCATCCATAAAACAGGGATAATACCTTGCTGAATAGGGTGTTGTTAGAGTTAAAGGTGAGGGAAGTTCCCCAGAAATATGCATGACCGGTGTTCTGTAACATATGCCACTGTTACTTGTCTAGGCCCTGAGCTCATGATGAAAGACATCATGAGACAGCCTCTCTCTCCTCAGATTTCCTTTTCCCAGTCTACGAGGGCAGCAACAAGCTCACAGAGGTTCCCTGCACAATGCAGCATGTAAGATGCCAGAAAGCTGCCCCCATTAACACCAGGCATTCATCTTCCAAAATCATCTGAGTTCTTCTTTCTGTTACTTTTCATTAGGTCTTGCAGCTCTACAAACATAATCTGTGCTAAACTCTGTTGTTGTCCGAGGTCAAAAAATCTATTGGAGTTTGGAGCAAAGAAAGGTTTATTGCAAGAGTCAAGCCAGGAGTTCATGCTCAAAAAAATGCAAACTCCCTGATGGATTTCACGGGAGAGTTTTTACAGGGAAGGTGAGGGAGAAAGTGCAGTGTAGGTTTCCCTCATTATTCTCTGATTGGTTGATGATGAGGTAACAGGGTCATGTCACGGGGTTTAACATCTTCAGTCCTCAGGCTCCAGATGGTGTGGGGGCTCCCTGCTCATGGTCATCATGCAGTTAACTTCTTCCATCTGAGAGGACCGCGCTGTGTCTGAGCCTCCAGCCTCCCCGCCGGCGCCTCCAGGAGCAGCTCCATCACCAGAGCAGCGCGACCCCGGCCCGCGGCCGCCTCCACCGGCAAGATGCGGAAGCCCAACCCGCTGCAGGACGCGAACTTCTGCTCGCGCCTGTTCTTCTGTTGGCTAAACCCCTTGTTTAAAATTGGTTACAAACGAAGATTAGAAGAAGATGACATGTACTCTGTACTTCCGGAAGATCACTCCCAGCACCTTGGAGAAGAACTACAAGGGTACTGGGATCAAGAAGTTTTGAGAGCTGAGAAAGATGCGCGGGAGCCTTCTTTAATGAAAGCAATCTTTAAGCGTCACTGGAAATCCTATTTAGTTTTTGGAATTTTTATACTTCTTGAGGTTAAAACATAGTGTTGTGGAAGGAGAAGACATTTTATACCACATTATGATATTATTGATGGTCAGTAAATAACATAAATGCTGAAAGTGATCCTTGACCAAAAGAATATACTACAAGCTCAAGAAATGTGGTTTGGAGGACGTAAACTTGGACCAGAGCCCAGATAACATAAGACGTTTTACAGGTGCTCAGCAAGTAATTGTTAAGTTGCCCAGTTCACATCTGATAAATGCTTTCCTAAGAAGGGATCGTCATCTCTCCCCTCCTGTGATACCGAACCCATGGCCCTGCATTTGGGCTGGAGCTCCCAGAGCTCCCAAGAGTACACCCTTCCCTGGGCTGCCTGCCTCCTTCCCTGTAGGCTGGGTCACCCAGGCCAGAGCTCCCTGTGATGAGGAGCTCCAGCTTCATCATTGAATTGCAGAGACTCCATGCACCATCCATGCTGGTTTCTGTCCCTGGATGTGGGGTGGTTTCCTGCATGAAAGGGGATCCTGGTAGCCTGGCATTAGCAGAAGGTGTAGGAGAGGATGTGGAGTAGACAACCAGAGACAGAAAGCAGTGAGGTCAGTGACCTTCATGACCCTGAAGATCCTGGGTCAAGATCCCTCAGAGAGACAGTTCCAACCTGGGGACACAGTGCCATCAGCCCATCTATTCTGGCTGAGCCTACTCAAGGTCTACTGCAGACCCACTTGGGTGGCTTGTGCTCTCAGTGGTCCCTTAGTTCTGCCATAGGGACATGGGTGGCCTGTGAGTGTGTGAAAGCAGAAGGGATGGAAGATGCAGGTGCTGTGAAAGGGGTGGAGAAGGTGGTGAGTTGTCATAAGTCCATTGTGTTGAGGATAAAGTGGGTGGGCCAGGTGGTTTAGAGTTGGGGGGTGTGGCTCTTGTTTAAAGGTTGTGTTGTACCAGAGGACACTGTGGGTAGCAGGCAGCAGAGTAGGTGAAGTCTGCCCCACACAATTGGAGAGACCAGAGAATCTGTCAGCTCACAGGTGACTTAATGGTCCTGGGAGATGGAGTCTTTGATGACAAAGGTGGGTTGACCATTGTGTCAGAGAGTGGGGACAGGTATGTGGGGTGGAGTGCCACCTTTGAGAGGGCATTGATGACTGAGATACTGCAGTGCCTTGTGAGGGCAGGGTGGAGTGTTGATTTCAAAGTTGTCCAGCCCAAGTAATACTGCCTGCTGGGGATCTAGGAGGGTGAAACCTCTTTCAGGAGGTTGGTTGTTGGTCAATCATGGCAGAGAAGTGGGAAGTTGAGGACCTGGTAAATGTGGGGGCTCATTTTCTGTAGTATTAGAAGTACTAGTAGCAGATAACAAGAAGGTGGAGGAGTAGGTGGACCTGGAGTACATCTCTCTCCATGATACATCAGGAATACACTTTCAGGAATACATCAGGAAGACACAGAAGTGCATGCAGAACACCAGCTGAGAGTGGACAGGAGTACCTGGCCAGTGGAAAAGAATATATAGAGCCACACAAAACTTGAGATCAAGCCCCGAGGCTTTGGAGTGGGTGCACTGACTCCACGACCCTAGTCTACCAGAAAACTAACCCTAGGGAGTATCAAATAGTGAGAACTCACAACAAAGGAAATCACTTGAATACAAGGCCCAGCATCACCCAACCACCAGTAGCACTGTGTGGAGGATGCCTCATTTAAACAACAAACAAAACAAACATACAAACCCAATCATCAGCAGACAGGATTACCACCTCACTCATCCTTGCCCATAAGAGGAAAAACAAACAAAAAAACTCAGCACAGATCTCCCCTATATGAAGCTCACACAAACCACTGGACCAACCTTAGGAGGGCAGAAAACAAAAAGAAGAAAGAATTCAACCTTGAAGCCTGGGAAAAGGAAACCTCAAACACAATAAGTTAAAAAAAAAAATGAAAAGGCAGAGAAATGCTACACAAATGAAGGAACAAACTAGAAAAAACAGAAGTCCAAATAAATGAAGAGGAAATAGGCAAGCTACCTGAAAAAGATTTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAACTGCAAGAATAAATTAACAAAGACCCAGAAGAATTGAAGAATAAACATTCAGAGACAAACAACACAAATACTGAAATTAAAAAATACTCTAGAAGGAATCAATATCTGAAGCAGAAGAATGAATCTGTGAGCTGGAAGATAAAATGGTGGAAATAACTTCTGAAGAGCAGAATAAAGTAAAAAGAATGAAAAGAACTGAGGATAGCCTCAGAGACCTCTGGTACAATATCAAACCCACCAACATTCGAATTATAGGGGTCCCAGAAGAAGAAGAGAAAAATAAAGGGTATGAGAATATTTTTGAAGAGATTATAGTTGAAAATTTCCCAAACATGGAAAAGGAAACAGTCAAGTCCAAGAGGCACAAAGAGTCCCATACAGGATAAATCCAAGGAGAAACATGCCAAGGCACATGTTAATCAAACTAACAAAGACTAAACACAAATAAAGACTATTAAAAGCAACAAGGGAGAAGCAGCAAGTAACGTACAAGGGAAACCCCATACACTTAACAGCTGATCTTTCAGCAGAAACCCTGCAGACCAGAAGGGAATGGCAGGATATATTTAAAGTACTGAAAGGGAAAAATCTACAGGCAAGATTACTGTATCTATCAAGAATCTCATTCAAAACTGATGGAGAAGTCAAATGCTTTTCAGAGAAGCAAAAGTTAAGAGAATTCAGTACCACAAAACCAGCTTTACAACAAATGTTAAAGGGACATATATAGTCAAGAAATACAAGAGAAGAAAGAAGATCTACAAACTCATTCCCAAACAGTTAAGAAAATGGCAATAAGACATACATATCAATAATTATTTTAAATGTAAATGAATTAAATGTTCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAAACCCACTTCAGCCCTAAAGACACATATAGACTGAAAGTGAGAGGATGGAAAAATATGTTCCATGCAAATGAGAAGCAAAATAAAGCTGGAGTAGCAATCCTCATATCAGACAAAATAGACCTTAAAAGGAAGATTACAAGAGATAAGGAAGGTTACTACATAATGATCAAGGGATCAATCCATGAGGAAGACATAACAATTGTGAATATCTGTGTAACCCAACATGGGAGTACCTCAATACATAAGACAAATGCTAACAGACATAACAGGAGAAATTGACAGTAACACAATCATAGTATGAGACTTTAACCCCCTACTCACATCAATGGACAGGTAATCAAAACAAAATTAAGGAAGTACAAGTCTTAAATGATAAATTAGATGAGATGGATGTCATGGATATCTTCAGGACATGCCATCTGAATGCAGAAGAATACACCTTCTTCTTAAGTGCACACAGAATATTCTCCAGGATAGACCACATCTTGTGTCACAAATCAAACAGTAAATTTAAGAAAATTGAAATCATATCAAGCATTTTCTCTGAACACAATGCTATGAGGCTAGATATCAATTACAAGAAAAAAAAAAAACTCTCTAAGAAACACAAGCACATGGAGATTAAACAATACGTTTCTAAATAACCAACAGGTTACTGAAGAAATCAAAAGGGAAATCAAAAATTTCTAGAAACAAATAACAATGAAAACAACAACCCAAAACCTATGGGATGCAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCAATATAATCCCACCTCGAGAAACATTGAATAGATAACCTAACTTTACACCTAACACAACTGGACAAAGAAGAACAAGAAAATGCCCAAATTAGTAGAAGGAAAGAAATCATAAAGATCCGAGCAGAAATACATGAAAAAGAAATGAAAGGAACAATAGTAAAGATTAATAAAACTAAAAGCTGGTTGTTTGAGAAGATAAACAAAATTGACAAGCCTTTAGCTAGACTCATCAAGAAAAAAAGAATCAAATCAACAAAATTAGAAATGAAAAAGAGGTAACAGCAGAGGATGCAGAGATACAAAGGATTATAAGAGACTATTATGAATAACTATATGGCAATAAGATGGATAACTTAGAAGAAATGGACAGATCCTTAGAAAAGTTCAATCTTCCAAGACTGAACCAGGAAGAAATAGAAATTATGAACAACCCACTTATAAGTACTGAAATTACTGAAATTGAAGCTGTGATCAAAAATCTCTCAGAAAACAAAAGCCCAGGACCAGATGACTCCATGGAAGAATTCTTTTAACATTTACAGAAGAGCTAATGCCTATCCTTCTAAAATGCTTTAAAAAAATTACAGAGGAAGGAACACTTCCAAACTCATTCTATGAGGCCACCATCGCCCTGATACCAAAACCAGACAAAAACAACACAGAAAAGAAAACTACAGGCCAATATCACTGATAAACATAGATGCAAAAATCCTCAACAAAATTCCAGCAAACAGAATTC TCONS_00035693 r 5' 29777 TCONS_00035693 r 5' 16689 EMBV3_36526 TTACACCTCAAGCCTACCATGCAGTGCACCTTGAACAGAGGCAGGAGGGCCTGTGGCTCT Gene GeneID:509622|NR1H2:NM_001014883:172_cdna Constitutive 0 NULL GeneID:509622 18 GENE NR1H2 MGC134091 nuclear receptor subfamily 1, group H, member 2 EMBV3_43082 AAGGGAGCTCAAGGTCACATGAAGAGTCGAAAGGAACAATCAGCAGCCCTGTTCAGAAGG Gene GeneID:510093|DDX3X:XM_002700204:131_cdna Constitutive 0 NULL GeneID:510093 X GENE DDX3X NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked EMBV3_40818 GCTTTATCTGCACAGACATGCTATCTACCCCCAACACCCACCCCTCAGTACAGTGGAGAT Gene GeneID:532724|ALDH5A1:XM_002697564:375_cdna Constitutive 0 NULL GeneID:532724 23 GENE ALDH5A1 NULL aldehyde dehydrogenase 5 family, member A1 EMBV3_24303 TACAACAAAAATCAGTCTTCAGTAGAGGGACCTTAACCCCAGAGGCCTGCGTCACTGAGG Gene GeneID:521099|LOC521099:XM_002707768:57_cdna Constitutive 0 NULL GeneID:521099 19 GENE LOC521099 NULL similar to family with sequence similarity 20, member A EMBV3_07295 CCGTTTTAACCGTCTAAGCAGGGGTTGTGTTAGCTGATGTGCCTGTGATTCTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_30354 TCTCCAGCTCAGTAATGAAGACAACCGCTTTCCCACCCATTCTCTGTCCCAGGGATTGAT Gene GeneID:531606|SRXN1:XM_002692428:414_cdna UTR3_Alt 1 NULL GeneID:531606 13 GENE SRXN1 NULL sulfiredoxin 1 homolog (S. cerevisiae) EMBV3_00036 TATTACCAGTTATTGGTCACCCGGTTCCAGTTCAAATTGCCTTAATATTTGGTTCAAGAA Variant GeneID:617339|FBXO36:NM_001082617:184_cdna 105^213 3 EMBV3_02737 GeneID:617339 2 GENE FBXO36 MGC152144 F-box protein 36 EMBV3_00376 TGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGC Gene BVT0102_091796 + 0 NULL GK000015.2:7714080-7882946 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152751 TCONS_00060450 TCONS_00238892 TCONS_00233446 TCONS_00064860 TCONS_00208375 TCONS_00224115 TCONS_00023028 TCONS_00031916 TCONS_00250504 TCONS_00162600 TCONS_00135549 TCONS_00135527 TCONS_00249014 TCONS_00254141 TCONS_00060447 TCONS_00006941 TCONS_00091329 TCONS_00110347 TCONS_00111488 TCONS_00250238 TCONS_00060451 TCONS_00055354 TCONS_00206538 TCONS_00071045 TCONS_00070842 TCONS_00189808 TCONS_00139971 TCONS_00229877 TCONS_00098383 TCONS_00254568 TCONS_00122496 TCONS_00162777 TCONS_00152746 TCONS_00007508 TCONS_00060449 TCONS_00198911 TCONS_00252355 TCONS_00219474 TCONS_00187395 TCONS_00010467 TCONS_00209635 TCONS_00250940 TCONS_00136862 TCONS_00063064 TCONS_00196842 TCONS_00088085 TCONS_00023027 TCONS_00031937 TCONS_00166080 TCONS_00039625 TCONS_00186029 TCONS_00253241 TCONS_00229574 TCONS_00197506 TCONS_00177939 TCONS_00130261 TCONS_00124128 TCONS_00135700 TCONS_00098584 TCONS_00060448 TCONS_00078858 TCONS_00141271 TCONS_00109860 TCONS_00107450 TCONS_00231501 TCONS_00251931 TCONS_00039653 TCONS_00039852 TCONS_00210179 TCONS_00056147 TCONS_00190575 TCONS_00233374 TCONS_00166316 TCONS_00060446 TCONS_00033237 TCONS_00080323 TCONS_00040696 TCONS_00011865 TCONS_00239075 75 XLOC_092516 XLOC_036736 XLOC_145558 XLOC_142928 XLOC_039584 XLOC_126888 XLOC_137411 XLOC_013698 XLOC_018161 XLOC_153447 XLOC_099481 XLOC_081772 XLOC_081750 XLOC_151957 XLOC_157079 XLOC_002503 XLOC_056104 XLOC_066251 XLOC_067388 XLOC_153181 XLOC_033162 XLOC_125060 XLOC_042818 XLOC_042619 XLOC_115845 XLOC_085033 XLOC_139371 XLOC_058629 XLOC_157500 XLOC_074051 XLOC_099658 XLOC_092511 XLOC_003069 XLOC_120564 XLOC_155296 XLOC_132793 XLOC_113441 XLOC_006018 XLOC_128146 XLOC_153883 XLOC_083073 XLOC_037791 XLOC_118507 XLOC_052872 XLOC_013697 XLOC_018182 XLOC_100918 XLOC_023442 XLOC_112082 XLOC_156182 XLOC_139069 XLOC_119167 XLOC_107712 XLOC_078972 XLOC_075680 XLOC_081923 XLOC_058829 XLOC_047743 XLOC_085699 XLOC_065764 XLOC_063360 XLOC_140990 XLOC_154872 XLOC_023470 XLOC_023669 XLOC_128689 XLOC_033950 XLOC_116610 XLOC_142856 XLOC_101154 XLOC_019471 XLOC_049207 XLOC_024512 XLOC_007415 XLOC_145741 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_14962 AGAGGTCCACAGTAGGTTTTTTCCCCACAGACAAGGCTTACGTCCTCATTAGGTGTTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15479 CAGAGCCACGTATCCTGGTTGTGTTCCAAGCCCTTCAAGGTCATTTGCATCTACATTGCC Gene GeneID:281956|NXPH2:NM_174406:5_cdna Constitutive 0 NULL GeneID:281956 2 GENE NXPH2 NULL neurexophilin 2 EMBV3_21628 GGTGGGAAAGGTTGTGAAATTGGGGATTACAGAAACAAAGTCTCAGGTGGGTAGAGGGAA Gene BVT0102_338806 - 1 EMBV3_05254 GK000024.2:49702610-49737879 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16835 CGAAGTTGTGGTCTGTCCTTGAATCCTCTATTAATTGCAGTGTGTGAGCCAGAGGGAGCG Gene GeneID:617091|ENC1:NM_001078067:172_cdna UTR3_Alt 2 NULL GeneID:617091 20 GENE ENC1 MGC139340 ectodermal-neural cortex (with BTB-like domain) EMBV3_10808 CAGGATACTATCATGGAAGGTACAGGACCATGTGGTAGTTGCCTATGATTGGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_03277 GAGGATGAAGAAGACGAAGTCGTCAATGAGGAAAGAACTAGCAGAGGCGCACAGAGCTAA Variant GeneID:512466|BCCIP:NM_001046122:33_cdna 154^587 3 EMBV3_00070 GeneID:512466 26 GENE BCCIP MGC134343 BRCA2 and CDKN1A interacting protein EMBV3_36321 TTTCTGGCTTAGGAGTGTACCTTAGCTCTGCTGCTACCCACAGCTCCCACTCAAGTGCAA Gene GeneID:512296|LOC512296:XM_002688698:56_cdna Constitutive 0 NULL GeneID:512296 7 GENE LOC512296 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_20203 GGAGACTATAACTCAGGGACTAAAGGAGGGCCAGTTAAGCAAACAGAAGTGTTCCTGTGC Gene GeneID:505038|SAAL1:XM_002693038:301_cdna Constitutive 0 NULL GeneID:505038 15 GENE SAAL1 NULL serum amyloid A-like 1 EMBV3_04249 TCATCCCTTCTGCTCGCACATACACGCACACTCTCTTTCACGGACACACACGGGTATACA Gene GeneID:100335434|LOC100335434:XM_002699489:37_cdna Constitutive 0 NULL GeneID:100335434 X GENE LOC100335434 NULL hypothetical protein LOC100335434 EMBV3_35054 GCAGTTTTCACAGGTGCTTTTAGTTACTCTGCCTGGGGAGAAAATCACTATTAACTGCTG Gene GeneID:509598|MKI67IP:NM_001034354:5_cdna Constitutive 1 NULL GeneID:509598 2 GENE MKI67IP MGC127116 MKI67 (FHA domain) interacting nucleolar phosphoprotein EMBV3_34727 TCCGACTTTGCCCCCTTTTGGGGAGTGCACAGCCTGACAATTGCAGATCAACAATCATTA Gene GeneID:787248|SIPA1L1:XM_002690995:292_cdna Constitutive 2 NULL GeneID:787248 10 GENE SIPA1L1 NULL signal-induced proliferation-associated 1 like 1 EMBV3_24032 CCAGAACTGGCTCGAAAAGAAGGATGTGGTAGGGCGAGCCCGAGGGTTTTTACCATATGT Gene GeneID:504842|SEC11C:NM_001075175:41_cdna Constitutive 0 NULL GeneID:504842 24 GENE SEC11C MGC137715 SEC11 homolog C (S. cerevisiae) EMBV3_02275 GGCGTCACTCGCACCTGATCGAGCACCTCAAGCGCCACTTCAGAGAGAAATCCCAAAGAT Gene GeneID:516885|ZKSCAN5:XM_002698214:790_cdna UTR3_Alt 2 NULL GeneID:516885 25 GENE ZKSCAN5 NULL zinc finger with KRAB and SCAN domains 5 EMBV3_43504 GTACTCCTGTTCGTCCAGAAATTTTATACCTCTACAGATCCTCACCATCACCCCCACCCC Gene BVV0102_031100 + 1 EMBV3_12185 GK000018.2:35474391-35476832 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082939 TCONS_00082940 TCONS_00082944 TCONS_00082942 TCONS_00082943 TCONS_00082941 1 XLOC_051146 Coding TCONS_00082944 XLOC_051146 Coding Coding THAP11 18:35472678-35476344 o TSS62459 3530 1 TCONS_00082944_2 303 0.0144475920679887 2 0.0373806275579809 0.000153732498556308 0.000149646684802143 0.000559358103293813 3.30443733139299e-05 6.88464334643497e-05 4.82612593725508e-05 0.000167499433486162 0.000912566772486645 0.000669824543712098 4.83300315597192e-05 2.35258922113263e-05 3.97301076067039e-06 2.90160470435711e-10 9.42339957421927e-05 0.000109357974649696 5.00741498721556e-05 1.37111988090232e-09 0.00023243949061334 0.00030750274738657 0.000139374536833939 4.94283839143019e-05 2.6540491213342e-25 4.94477074364471e-05 5.39346198437629e-05 0.00025810369445246 0.000109742388780916 2.56126684893393e-09 8.18926775573692e-82 4.4769584515251e-06 0.000114375592610847 NM_001104994.1 THAP11 Bos taurus THAP domain containing 11 (THAP11), mRNA. 0.0 2336 100.00 0.36657223796034 NM_020457.2 THAP11 Homo sapiens THAP domain containing 11 (THAP11), mRNA. 0.0 1595 85.77 0.377053824362606 TCONS_00082944_2 sp|A5PKF5|THA11_BOVIN THA11_BOVIN THAP domain-containing protein 11; 0.0 622 100.00 0.996699669966997 1 coding GTCGAGGGGCGGGCGGCGGCAGACAGACCCGACCGTCGAAAAGCGCAGGAGGCCGGTGGGCCGGGTCGGGCCGCGCGGCGCAGCCATGCCTGGATTTACGTGCTGCGTGCCGGGCTGCTACAACAACTCGCACCGGGACAAGGCGTTGCACTTCTACACGTTTCCCAAGGACGCTGAGCTGCGGCGCCTCTGGCTCAAGAATGTGTCCCGTGCCGGCGTCAGCGGGTGCTTCTCCACCTTCCAGCCCACCACGGGCCACCGTCTCTGCAGCGTTCACTTCCAGGGCGGCCGCAAAACCTACACTGTGCGAGTCCCCACCATCTTCCCACTGCGCGGCGTAAACGAGCGCAAAGTAGCACGCAGACCCGCGGGGGCCGCAGCCGCCCGCCGCAGGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCCGTCGCCGTCCGCTTCCACTGCCCAGACCACTCAGCTGCAGCCTAACCTGGTATCTGCTTCTGCGGCTGTGCTCCTCACCCTTCAGGCCGCTGTAGACAGCAGCCAGGCTCCAGGAACCGTGCCGCCGGTGCCCACCACTCCCACGGGAGAAGACGTTAAGCCCATCGACCTGACGGTGCAAGTGGAGTTCGCGGCCGCAGAGGGCGCAGCCGCCGCCGCCGCTGCGTCGGAGCTAGAGGCTGCTACAGCAGGGCTGGAGGCCGCCGAGTGCCCCATGGGCCCACAGTTGGTGGTGGTGGGCGAAGAGGGCTTCCCTGATACTGGCTCCGACCACTCGTACTCGTTGTCGTCAGGCACCACGGAGGAGGAGCTCTTGCGCAAGCTGAACGAGCAGCGGGACATCCTGGCGCTAATGGAAGTGAAGATGAAAGAGATGAAGGGCAGCATTCGTCACCTGCGTCTCACCGAGGCCAAGCTCCGCGAAGAACTTCGCGAGAAGGATCGGCTGCTGGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTAAACGAGTCCCTTTTTGGCCCTCCGGACTCCCAGATCCCTGCCAGCTTAGAGGGACCTGAGGCCACCGTTGTTGAACTCCCTCATACTCCTGGGGCACTGTTTGACAGTACTGAGGCTTAGGGCAGCTGGACTCTTTTGCTGGTGACCTAGTACCCTCTCATTTCCTCCTGAAGCAACGTCCTGAAGTCTGAGACTGCACTAGGGACACCAGCGGTTATGACTTTGTCTACCCATCCACACCTTCACTCCCTAACCCCAAGTTTATATTGCAGGTTCTGGTTAAGCAGAGGCTTCAGAACCACTGAACTTGAAACTTACCCCATAGGGATGCAGGTGCAGCCTGTGATTCTGATGGGGACTGGCAGATCTGTGCCTCAGCTTCCTAGGACTTCCCTCCCAGGAGGCCATCTACAAGGGGATCTAGGTGACCTGTTGATGGAAATCCAGCCTGCCAGGGACTTAGGTCTATCCTGTTATGTTTGCTACTGGTTACAAATTCTATTTTCTGTACAATTAGTCAGACTAAAGTTTTCACTGTGTTTGTTTGGCAAAACGAATTAAACAGAAAATAAGGTTTTTATTTGGGTCTCGCCATTTTATTTTTATAAGGACTCAGCTCAGGATCCTTGAAACGTGGGCAGATGGACTTCCTGATAGGCCTCCCCCTTCTCCGCCTTGGTCTCGAGGACAGGCTGACCCAGGGAGTAGAGATGCTTCAGTGACCAGGTTTCTCCATAAAGGGGCTCTAACCCTCATAAGGTCTTCTCAGAGTTCCAACGCATACTGAAGAGTTTGGAAATTGCACCAAATGGTCCTGGTTTGCCCATGGGTTAGCTCCCTGTGTGCTTTCAACTGGGGGAAGAATCAACTGAGAACTAAGCTGAATTGTGGCACTTCCTGGGGGTTTTGAATTCCTTAAGAATTTTCAGCTGGAATTGAATTTTGCTCACTATTCTCCCTTAGGCCTAGTACAGTGTCTGGCACACATGGGCATACAGTTACTTACATCAGTGAAGACCACAGCTGGAGCCAGCCATGGGTTCTTACAAGGAATACGGATACCTTTGAACTTGGTGCACTTTCATTGTGAAGGAGGTGGATCCTCAGAGGAATTTAAGGATGAGTTGGGATCTGTCATCTCTTGACTCATTTTCTTCGCTGTTAGCATCTTTATTTAGACTGGATGTTGTAGTGACAAGGTGACATTTTTATCTGTGGTTCCAAGTCATTTAGCCGAAAGCTGGCAACAAATGCCTTTAAAGCTAGCAGTGTTTAACATGGGTATTGGGGCACAAATGATACTTACTGGGCTCCATAAAACATGATTCTTTTCTCTGTTACTTATGGAAAAAGCCACTTACCTGGGGGCTTTCCCTGTAGTTTCGAACTAGAATGACTCTAAAATATCCCTCCAGTCTCTGCTGTCCTTCTGACCCCTTGGCATTGACAAGTGTCTGTTGGGGAGGAGAAGTGGGAGATAGGTTGTGCAGGTGCCTAGTTGGGGAAAGGACTGTATGTCTCCCTTCCTGGGGTTAGGTCTGGCTGGTCATAAGGTGGTGGAAGCACAGTAGTACCCTTCCAGGCCAGCAGGGACTGTAGCCCTTTATGGGCAGGTGTTGGGTCACTCACTCCGCTGTCCCCACCCGCCTTCATTAGGAGTGAGGATTTTCCCAGGCTCCAGCCATGCTCCTTAGTGTATCATTTAGCTCCTGTTTGCTGAAGGGATTTAAGACTTTCAACTTTGGGTCTCTTGAACCTCTCAGCGGCACTCCCAGGACAGAGTGAGAAGAGCCAAACTGGTCAGGATTCGCTAGTGTCTGGATATGATGAGCACACAGTCTCTGGGGTGTTTTATCTTCTAGAAGGGAGGAGAACAGCTCAGAGCAAGGGAGGCCCTAGATACACCACAAGCAGGGCAATGCAGTCTCCCGGACTGAGTAATAAGAGAAGAATCTAGTCAGGCAAAATAATACAGATCTGGGATTTAATGAACAGAAGCCTGGTCTGGTCTTACCAGCCATCCCCAGGTGGAGGGGTGGGGGTGATGGTGAGGATCTGTAAAGGTATAAAATTTCTGGACGAACAGGAGTACTGAGCCATCTCTGACTAGGAGAAACCTTGTCTCTATAAACTTAACCTGTGGTCCCCCGGCTTAGCTGCAGAATCCCAGCAGGCCTGACCGAGACACACGTTACTTCAAATGTTTGTGTTACCCAGGAAACGACAACGAAAATGGGCTTTGAAAGAAAAGAGTAATGGGCGGGAGGGAGATTATGGACAATTTAATCGCTTAAATCACGGGGAAGGTTTGGGCGCACCAGTTGTTTATCTTTTTTCATTAATAAAACCAAGATTCTTAGCTGCCCTGCCTGATGCAAAACCCAACAACAAAAAACTTGTGAGAATGCTTTGTACACCCTAACTGCAGAAATCTAAGAGTAAGCTTGTTTCCAGCCCAGGAAAGCCTCGCTTGCTTGAAACCAGCTTTGGGTCCAACTTGCACCCGATAGGGCGCAAGAATGTTGGGACAACAG TCONS_00082945 TCONS_00082945 s 5' 0 TCONS_00082945 TCONS_00082945 s 5' 0 EMBV3_01942 CTCTTAGGAGAAGTGAGTCCCGCCCTGAAACTGTCTGAGAACCGACCCGCCATCACATCT Gene GeneID:617930|ACCN1:NM_001076484:298_cdna Constitutive 0 NULL GeneID:617930 19 GENE ACCN1 MGC143085 amiloride-sensitive cation channel 1, neuronal EMBV3_13824 TCACTGAGTAGGTATTTCCTTTGCACTGAATGTGTGGCCCTCACTAGGCCAGATGCTACC Gene BVT0102_082260 + 0 NULL GK000030.2:53975159-54368629 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246952 TCONS_00244404 TCONS_00246951 TCONS_00244400 TCONS_00244401 TCONS_00244396 TCONS_00244402 TCONS_00244403 TCONS_00244397 TCONS_00137030 TCONS_00244399 3 XLOC_151175 XLOC_150448 XLOC_083240 Coding TCONS_00244402 XLOC_150448 NonCoding Coding - X:54268567-54341547 - TSS183694 3824 2 TCONS_00244402_4 117 0.328190376569038 3 0.947642472492087 9.69885221589816e-64 1.86282551067381e-08 1.90132964008037e-128 1.55589294898306e-08 1.47679132830417e-55 1.45362671304612e-63 2.24358203398849e-25 0 5.93674499405913e-13 0.000484660145965839 0.000328150091959315 0.000332985476308095 1.32326046532508e-05 1.17527485961037e-05 8.99229866635434e-06 0.00127755166110361 0.00148246322020819 0.000870347477634168 3.92247583724602e-32 0 5.66754472368632e-14 0.0010844503754755 0.00090903544159956 0.00134683655123545 0 8.59974237103055e-137 0 0.00028657715338777 0.00018282646020562 0.000149523646998992 XM_005227774.1 LOC101904765 PREDICTED: Bos taurus proline-, glutamic acid- and leucine-rich protein 1-like (LOC101904765), transcript variant X1, mRNA. 0.0 688 100.00 0.0993723849372385 NR_038864.1 LOC401324 Homo sapiens uncharacterized LOC401324 (LOC401324), non-coding RNA. 2e-43 183 74.51 0.0789748953974895 0 noncoding 0 0 0 0 -0.0988881025758033 0.388162835085918 -0.00659136412236411 0.895121271895186 TTATTACTTTCAAACAAGCTTTTATTTCCAATGTGAACAATACTATCAAATTATCTGTAAAAGGTAAGAGTAAAGTCAGATGTCAGTAGTTAGTATCACTTTGGGGCATTGAAACTTTGAAACAAAATTAGTATTTCAGGCTAATGAAAACAAGAATATCCATGAAGAACAGATTCATCTTTTCTTTTGCTGTCTGCTTTTTCTATGCCTTCCCACTGTATTTTCCCTGCCAACTTTTGACCCCAATGTCTGCATCATTCTGCCCCAATGATGAGGGTGAGGATCAGTATGAAAATGCTGATGAAGAGGAAGAGGATAGAAATGAAAAACCTGAAGGACTCTGAATGGATATGGTCTCAGCAAAGAGCAGCTCTGGATAATACAGTGGGAAGGCATAGAAAGAAGCAGCCAGCAAAAGAAAAGATGAATTTGTTCTTCATGGATATTCTTGTTTTCATTAGCCTGAAATGCTAATTTTGTTTCAAAGTTTCAACGCCCCAAAATGATATTAACTACTGACATCTGACTTTACTCTTACCTTTTACAGATAATTTGATAGTATTGTTCACATTGGAAATAAAAGCTTGTTTGAAATTAATTCTCCCTTAGCCCAGTCAAGTTGACACGTAAAATTAACCATCATAATCCTTGTGGAGAATACTCACCCTGTACATTGCCCATGAGATGACATACTTACAGGATGATGACTTTCCACGTATAACAAAGACAATTTGAACAGCTCCTAGGTGTCAGGTTGCTCTAACAAACACATTTGTTAACAAATGTATTTTCTTAATTAAGAATGAAATGGATAGCATGTTTATAAAATAGTCTTTCAAGATAAGTTTGAGAAAAAGGTATTCTAAAGGCCAGTGTCTAGAGGCCCATCCCTTTGTCTCAATTTATTCTGCTCCTGCCCAAGGTCAAGATTGATTATCTCTAACTTGGATCATTAACAGCCTCATTCTCTCTGATTTTCTGCACTTTCACTATGATGTGTCTAAGAGTAAATTTTTGTTTTTTATCCTGCCTAGCACTCACTGAACTTTTAGAATCTGCATTTCAATTGCTCTGAAAAATTCTTGGCCATCATTTTCTTCCCCGTTTCTCTCTCCTGTCTTTCTGGGATTTGAATTAAACATATACTTTGTATCTCTTATCCTACTTTTTTTCATATTAATCTATTTCTCCAGGCAGAATTCTGGATGATTTCTTATAATCTATCTTCCAATTCAATAATTGTCTTAGGTTTATTTTTCTTGATTACATTTATCATGATCTAATGGTTATGCCAATTTTTATTTATTTATTTATTTTTTGCTGAGCTTCATGGCTTGTGGGATCTTCCTTTCTTGACCGGGGATTAAAACCAAGCCACTGCAAAGCACATTGAAAGCATGAGTCCTAATGGCTGGAGACCAAGAGAATTCACTCTCTGCTGCTTTTTATGATTTTCTGTTCCCTGAAGATATTTTAAAACATACTTTTTAATTTTTTGAAATGTAGGCCATAGTGATTATACTCTACTCTTCATTCTGGCTGTCACTTACAATATATTTTTTTTTTCCTTATGTGCCTACATAAGGAACAGGGCTTGAAGTTCCTTGGATCACTAAGTGATGTATATCTAGGCTGCAATTTATTCCAGCGCTTGTTACTTCTGGTTCACTATTACCTGAAAGGGGTAGTCACTTATTTTCAGCTTAAAGTGGTGGCAGAGCTCATCAGACCTACTCATTGGAGCTGTGAGATTTGACTTTCATTTTCTTTTCCCATGAGGCCACCAAAACCACAGATCAGTTCCATAATTCTTTCTTCTAGATTCAGCTAATGCCCTCAGGAAAAACTGGCTCTGAGTGCTGGGCTTTCCTATTTGGGTTCTTGTCTTCTTGAAGAGTTTAGTCTCATAGTTTCTTAGTGCTTAACAAAGATACTTTCTTTATACATTTCATCCAGTAATTTTTAGTTGTCCTCATTGGGATGGTTAGTCCAAATTACTAAGCCTGCCATTACTGTAAGCAGAGGTGTTCACCACCCTCCTAACTTCACTTCTTGTCACCAATCTTTCTTTCTTCCAGTTTCTCCTCTAGAAAGTAACTGAAAGTTTCTTTCTGATGGCGTTATTTTCCTGCACAAATCCTCCAAAAGCTTGCTGCTAAATGTAAATTAGAAATCAAATTCCTCAGTTTGGACAATCAGATCGAAAATGCTCTTTCTGAGAAAGTACTGTATAGCGCAGGGAACTCTACTCAATACACTGTGGTGACCGAAATGGAAAGGAATTCTAAAATAGAGGGGATAACCGATTCACTTTGTTATACAGCAGAAGCGGATATAACATTGTAAAGCAACTATACTCCAATAAAAATTAACTTAAAAATAAGAGATGTGGATGGAAAGTGGAGTATGTGGAGTAGATTATGGAGAGAAAACATGAAGAAAAGTTCTCTGCCAGTTAATGAGAAGTCTGAAATTTTTAAAGTAAGAAAATGATGTGATTTTATTTGGATTTAGACATGGCACTTTATTGGCAGTATGGAAATCGTGTAAGTGTCATAAATAGAATGTCTGCATTCCCCCAAAATCTATATGTTGAAATCTTAATTCCCAAGGTAATGGTATTAGAAGGTGGAGTGTTTGGGAGGGGCCTAGGTCATAAGGGTGGAGTCCTCACGAATGTGATTAGCGCCTTATTTAAGAGGGTCCAGAGAGATACTCTGCCCCTTCTGCCAAGTGAGGACATAGTGAAAAGTTGGCATTTAAGATCCAGGGAGTGGACTTCAGGAGACACCAAATCTGCTGGTGCCTTGATCCTGGATAAACCTGCTTCTAGGACTGTGAAAAATAAATGTTTGCTGTTTATAAAATAAAACATTCTTTCTTAGCTTCATTTATTCACTGAGTAGGTATTTCCTTTGCACTGAATGTGTGGCCCTCACTAGGCCAGATGCTACCTATTCTTTTGCTTCTTACTTCATTTACCTCTTGTCTTACCTCCCAATCCACCTTATACTTTAGCAAAACTGAAATACTCATTGTCATGTGACAGGGCCAAGTCAGATAACAGATAGGCTAACACCTAGGTCAGTGATATTTCCTCTACCTCAAAATACGATATTCACGTTTAAGTCATAATACCATATTCATGTTTAAGTCCATTCAATCTAGATATCTATGAACATTCTAATAAATGACCAAGACAAAAACTCAAAAAGCACAAAGTGACTTTCTCATATTCCTTACTGTCTTTTGGAATCTTTCTCATATATATCTGGGATGTAAGCTCTGGAAAGAAATTCATTTTTGCCATCAAGCTTTTGGTAATTTCCATAGTCACAAGGGGGGCTTCCTTGGTGGCCAAGTGGTAAAGAACCCACCTGCCAATGGAGGAGACATGAGTTCGATCCCTGGGCTGGAAAGATCCCCTGAAGAAGGAAATGGCAACCCACTCCAGTATTTTGCCTGGGAAATCTTAGGGACAGAGAAGACTACAGTGGGGTCCCAAGAGTCAGACACAACTTAGTAAGTAAACTAAAACAGTAAAACTGTGAGGCTTTTCTGTCTACATGTTGGGGCCAGGATGCTGGAGAATTCGAGTGGCCTGCTCTCCAGGGGCTAACTGCCTTGAAGATCTGATACACTGACCTTTGCCTTCTTTTCCCCTTCTATGATGCCAGCCAAGAAGCCTCACGTCAACTTTGCACCCCTTAGCTATGGGAGGGGGGCACTCCAGGTGCCCAATTTCTGTCCTGATGACCCTCCAGAGCCCTATCATAAAACACATTGACAACCTCTTCTACCCTTTCCAGAAGAGAGGCACTTGG TCONS_00246953 TCONS_00246954 TCONS_00246955 TCONS_00246956 TCONS_00246957 TCONS_00246958 TCONS_00246959 r 3' 194721 TCONS_00246953 TCONS_00246954 TCONS_00246955 TCONS_00246956 TCONS_00246957 TCONS_00246958 TCONS_00246959 r 3' 267700 EMBV3_07210 ACAGCACTTCCTTACTCCTCCCACAGCCCAGAACCTTGGTGGGTCCAGGAAAATACTCAA Gene GeneID:100336946|LOC100336946:XM_002685419:2_cdna UTR3_Alt 1 NULL GeneID:100336946 2 GENE LOC100336946 NULL G-protein coupled receptor 39-like EMBV3_01937 AGGATGGGCATAGAAGTGGTGATGAGGCAAGTGTTGTTTGGAGCCGGGAACTACCACCTA Gene GeneID:281230|HPSE:NM_174082:4_cdna Constitutive 0 NULL GeneID:281230 6 GENE HPSE NULL heparanase EMBV3_23001 GGAGGTTACAGTCTGGCTGAAGTATTCGTGCTGTAAGAATCGGAATGGGTCTCCAGTGAG Gene GeneID:519922|OAS1:NM_001029846:195_cdna Constitutive 0 NULL GeneID:519922 17 GENE OAS1 OAS1Z 2',5'-oligoadenylate synthetase 1, 40/46kDa EMBV3_39336 CTTGAAGCCGGAGGTGACCCAGAGCTGGCGGTTCTGTCTTAACCAGAATCCCAGTCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18907 TTTGGGTGAACAGTCCCCATACAGCCAGCGGCTATTATACCATCTACGACAGTGAGACTC Gene GeneID:512064|DIP2B:XM_002687272:141_cdna UTR3_Alt 2 NULL GeneID:512064 5 GENE DIP2B NULL DIP2 disco-interacting protein 2 homolog B (Drosophila) EMBV3_09328 CATCACGACTCATCCACCTTCACCCTCAATGTCGCCCTCAACCACAAGGGCCTGGATTAT Gene GeneID:514996|PLOD3:XM_002698201:752_cdna Constitutive 0 NULL GeneID:514996 25 GENE PLOD3 NULL procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 EMBV3_35709 AGATTGCTTGACTGCAGAGAAACTGAAGGCAATGAGCCCAATAGGAGACTGCTGCTGTGG Gene BVT0102_033989 + 0 NULL GK000021.2:21720407-21724260 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35660 CCACAGTTTAAGTCACAGGAAGTTTCTTTCCCAGGAAGCTGAAATGGAAAGTCAGCCCTC Gene BVV0102_250660 + 0 NULL GK000025.2:35126595-35147759 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145308 TCONS_00147017 TCONS_00147019 TCONS_00145310 TCONS_00145309 TCONS_00147018 2 XLOC_088787 XLOC_089269 Coding TCONS_00145308 XLOC_088787 NonCoding NonCoding - 25:35143516-35147588 - TSS108916 2456 1 TCONS_00145308_2 100 0.276058631921824 3 0.397445345124048 8.52927837627814e-52 0.000674980048952543 0.00028615587178264 9.9250829867252e-29 4.79419102784893e-10 0.000118534860177602 0.00024052992964917 0.000561445195691276 0.000794024447456154 0.000138123188497206 4.43642910676574e-05 4.1499153753563e-05 3.0981967129174e-05 3.85798137818032e-19 0.000176618838700049 0.001154889334409 0.000568648021631631 0.000171051550525017 0.00077355464445148 0.000716219912319583 6.09014843984292e-05 0.000855023997649657 0.000586573684300754 0.000552329450944102 0.00040317257843686 0.000107943216724337 0.000362977887769162 0.000263423419462152 8.47898494829761e-48 0.000812761722379545 XR_240071.1 LOC101907779 PREDICTED: Bos taurus uncharacterized LOC101907779 (LOC101907779), 0.0 1629 99.56 0.371742671009772 NM_024653.3 PRKRIP1 Homo sapiens PRKR interacting protein 1 (IL11 inducible) (PRKRIP1), 4e-30 138 73.00 0.0863192182410423 0 noncoding 1 1 1 1 -0.232819280907854 0.198611243361232 -0.00727475777609607 0.900990621824723 ATTTTTGCAGAAATGAATGCCTCTGGCCAGCAATTTGTTATGTAAGTGAATGTGGAAATATCTTTGATCAATAGTGTTCAGATAACAAAAGACGTATTGAAACGTCTCTGGTCAGTAAGTTGTTAAAATACTGTACGTCACAGCAACGTGGTTAGGCGTCTTTGTCAGCTGCACTGAGTATCCTTAACTGCGCCTCTTCAAGTCCCTTGTCATTCACAGGGGATACTTCACTGATGCTTTTGCAAAAATGCTTCATCTTTAAGAAGTCTCACAGAAAGGACTTTCTGGCAAGCACAAGATTCTGATAACTTCCAGATCATACTGCTGAACTGGGGCTTCTGCACTGGACTGGTCTAGAGAGAGGACTGCTGACCTCCAACAACGCTGACCCCAGGATGAGAAGAGAACCCAGTGTAGACAGCTGAGCCAGGAATCTGAGCCAGACAGTACAGTACCTTGAAAAGTACAGTCATACAACAGCTGGCATTGAGTGAGCAGCTAAGAAGAGTCACCGACAGGAGGAGGGAGACGGAGCTGAAGGATCGTCAGCAACAGGAGACGGAGGGCAGGTGCAGCTTCCCTCATGCCCCAGGTGGATGGAACACATTTACATCTTTCAAAGTTCAAAATGTGCAGGTTTGTATGTAGGGAGCTTACTGCAGTAATTAGCAAGACAGCTCAGGCTGTAGCTTCCCGGCAGAAGGTGCTAGATTCTTTCGGCAGAAAAGTACCAGATGATAAAACTGCTTTACATTTTAACCACAAAAGAGACATGCAGTGGCCCACAGCTCCTGTTTTATATATATATATATATATATATATATATATATATATACACACATATATATTTAAAAAAATAGCCCTGGAGAAGCTGAAACCCAAATAGAGTTAATTCAAAAGACTCCTTGGTTACAGAATTTATATAAAAATGACTCACCCCCAAAACTGATTTTCCTGGTTGCCATCTATAACAGACTCTGGGTATACGGCAGGTGCGTTTGGATCTCTATCCTCATTGTACTGTGTCTGATTTTCAAGCGTTTGTCCAGGTGCTGTGACAAAGCCATCAGAGAGGTAATGTTTTCATAATACAAAGTACTGGCACCAAGCAACTTGAGAATTCTTTTAAAAATGAAAAGAATTTGAAAATGAAAAGAAAGTCAATGCCTTTCTCCCACATTCTTGCACAAATTTAATTACAAATGAGAAAATGAAGACACAAAGGAAAGCAGTCAAGAAAGACAAATAATTCAGCCACAAACAAAGTCAAGGCCATCCAGTTCCTCCTCACGGGCTATAAGTAGTGTCCTGAACCACACCCTTGAGTTGTTTTGCAGGTATTAAGATTTCCCACGAGGTGAAAGAAGTTACCTGCCTGCTGACCACCAGCAACGTAGACTCCAGACGGGCTGGAACCAGAAAGCTAAGAGTCCCCAGACATCACCCAGTTGCTCACCATCAACCAATCAGAATGGTGCATGAGCTGACGGCGCACCCTGTGCCCCTCTCCCTCGCAGTCTTTTGGGCTTTTGAGCACCAGCTGGCCTGTTCTCCTTGCTTGATGCCCTGCAGTGAACTTGGCTGTGGTAACACAAAGTACGGTGTCAGTCGCCTGGTTCTGCTGAGTGGATTGGGAGAGTGGATCCAAGCTTCCCGCTGGTAACAGAAAGCCTGCAAATCATTCAGCCTAAGGCACTAAAAGCCCACTGCACATCACCAGGAACTGCTGGAGGGCATCTCCCTGAGCAGCGTCTTCTGACATCCAGTAAAGGTAAAGACAAGCACCAGTCTAGTCACTGCCCACCTGCCCGGCACACATCTGCTGTGGAAGCTCCGAGCTCCTGGCTGGGGGCACCGGGCAGGGACTTGCCCGGAGTTCTCTGTCCCATCAGAGGCAGGGCCAGGACTCAATCCCAGGGCTCCAGGCTCGAAGCACGAGCTCTGACACACACACTTTGAGGGGACAAAGGAAACCAACAGTTCAAAGACAGGAGGACACAGAACTAACGGTCAGTCCCTAATGAAAGAGAAACACCACTTTCAAAACAGACAGTCAGGCTGTGTGCTAATTATGAGGGCTGACTTTCCATTTCAGCTTCCTGGGAAAGAAACTTCCTGTGACTTAAACTGTGGAAAGACAGACGTTATCACAGACGCCACATGGCTCAGGATGGAGCCAGGGAATCAAGAAACCTAAGATGTTTCCTCATTTCCCTTCACTCGAAACCACTATTTCCTTGATTATATCAAACTTTCTCTAGTGGCCCAGCGGGGTCCCCTGGGCCACCTGCTCTGGTCCAGCCCAGCCTGGCTCCTCTACCTGCTGACTTTCTATGACCAGCTGGTTTTCTGAAGTCCTCCTCACACGCCAGGTCTCTCTGCCGGCTCTGCCCCGGGTTCAGTCCCAGGTCTCCCTCTGCAGCTGCTGGGATGCGGGGAGAGGAGATAAGTCCTGG TCONS_00147019 r 5' 0 TCONS_00147017 TCONS_00147018 TCONS_00147019 r 3' 1540 EMBV3_30190 ACGACGTGACCCTGGACGACTTGATCATGGCTAAAGATGACCTCTCTGGTGCCGACATCA Gene GeneID:506238|PSMC1:NM_001014855:91_cdna Constitutive 0 NULL GeneID:506238 10 GENE PSMC1 NULL proteasome (prosome, macropain) 26S subunit, ATPase, 1 EMBV3_36066 TTTGCCAAGCACTGCGTGAAATGCAACAAGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14148 CACGTGGAGGCCAGCAGGGTTAATTTCGTTGCAGCTATTGATGTGTACGAAGACGGGGAA Gene GeneID:507761|GARNL3:NM_001077872:49_cdna Constitutive 0 NULL GeneID:507761 11 GENE GARNL3 MGC142512 GTPase activating Rap/RanGAP domain-like 3 EMBV3_23210 ATGTCCAAGCGGTTGTCACGGTCAACGCAACCAGGAGAGGGGACCTGAACATCAACATGA Gene GeneID:281968|PCSK2:NM_174413:13_cdna Constitutive 0 NULL GeneID:281968 13 GENE PCSK2 NULL proprotein convertase subtilisin/kexin type 2 EMBV3_16694 GACGGCATCCCTGCGTCTGTGCAGGGACACGTGGCCGTCACCCTCTCCCCTGAGACCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02640 GCTTGTCTGTTTAGTTCTGTGTATAAATGGAATGCTGTTGAGAGGACCCTCCCTGCGCCG Gene GeneID:534553|CFL1:NM_001015655:60_cdna Constitutive 0 NULL GeneID:534553 29 GENE CFL1 NULL cofilin 1 (non-muscle) EMBV3_25074 TTTGGGGAGCAGGATAAACTACCACCCTACCACGTGTGTGACTTCTCAATTTCCCACTGC Gene BVT0102_035247 + 0 NULL GK000019.2:39989907-39995183 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096825 TCONS_00096829 TCONS_00096822 TCONS_00096828 TCONS_00096827 TCONS_00096823 TCONS_00096824 TCONS_00096826 1 XLOC_058065 Coding TCONS_00096825 XLOC_058065 Coding Coding PIP4K2B 19:39990520-40008719 j TSS71864 5901 1 TCONS_00096825_4 369 0.0357566514150144 10 0.67628310803385 0.00205481994203945 0.00192594293852428 0.000918064758702472 0.00172395576826042 0.000376138416666395 0.000276893107516336 0.00083346414848502 0.00118611178840374 0.00111904945665936 0.000162328959658173 0.000188179119906294 3.73780888147357e-15 0.000275339751238119 0.000153871538537503 0.000629195628898747 3.26153793536317e-12 4.92037676868325e-08 3.60644904787087e-14 0.00133925684434395 0.00174563964855371 9.19159260492132e-05 1.43571539012259e-23 1.8106535318902e-11 3.23504887372971e-14 0.00182565643726005 0.000993490807266231 0.000786419471003814 2.38534544258673e-05 0.000267722624850505 2.34854258272917e-08 XM_005220597.1 PIP4K2B PREDICTED: Bos taurus phosphatidylinositol-5-phosphate 4-kinase, type II, beta (PIP4K2B), transcript variant X1, mRNA. 0.0 8978 98.88 0.863921369259448 NM_003559.4 PIP4K2B Homo sapiens phosphatidylinositol-5-phosphate 4-kinase, type II, beta (PIP4K2B), mRNA. 0.0 4365 79.35 0.863751906456533 TCONS_00096825_4 sp|Q80XI4|PI42B_MOUSE PI42B_MOUSE Phosphatidylinositol 5-phosphate 4-kinase type-2 beta; 0.0 758 98.91 0.989159891598916 1 coding 1 0 1 0 -0.0828097459097132 0.602241306057584 -0.0477883706552722 0.413632338324071 TGGCTAAACTGGGATGGGGAAGGGCAGGAGCTGCCTTCTCAGCTCTGCACCAGTGGGAGGCCAGTTCCCTGTGCAGCCTCCAGCTCCCTGAAGGGGATGAAAGACAATGAGAAGATCAATGAGCTGAGCAATGTCCCTGTCCCTGTCATGCTAATGCCAGATGACTTCAAAGCCTACAGCAAGATCAAGGTGGACAACCATCTCTTCAATAAAGAGAACCTCCCCAGCCGCTTCAAGTTTAAGGAGTACTGCCCCATGGTGTTCCGAAATCTCCGGGAGAGGTTTGGGATTGACGATCAGGATTACCAGAATTCAGTGACACGCAGCGCCCCCATCAACAGTGACAGCCAGGGCCGGTGTGGCACACGATTCCTCACTACCTATGACCGGCGCTTTGTGATCAAGACTGTCTCAAGTGAGGATGTGGCTGAAATGCACAACATCTTAAAGAAATACCACCAGTTCATAGTGGAGTGTCACGGCAATACCCTTTTGCCACAGTTCCTGGGCATGTACCGCCTGACCGTGGATGGTGTGGAAACCTACATGGTGGTCACCAGGAACGTTTTCAGCCATCGGCTCACTGTACATCGCAAGTACGACCTCAAGGGTTCTACTGTTGCCAGAGAAGCGAGTGACAAGGAGAAGGCCAAGGACTTGCCAACCTTCAAAGACAATGACTTCCTCAACGAAGGGCAGAAGCTGCATGTAGGAGAAGAGAGTAAAAAGAACTTCCTGGAAAAACTGAAACGGGACGTAGAGTTCCTGGCCCAGCTAAAGATCATGGACTACAGCCTGCTGGTGGGCATCCACGACGTGGACCGGGCAGAGCAGGAGGAGATGGAGGTGGAGGAGCGGGCCGAGGACGAGGAGTGTGAGAACGACGGCATGGGCGGCAGCCTGCTCTGCTCCTACGGCACGCCTCCAGACAGCCCGGGCAACCTCCTCAGCTTTCCCCGGTTCTTTGGACCTGGGGAATTTGACCCCTCTGTTGACGTCTATGCCATGAAGAGCCATGAAAGTGCCCCCAAGAAGGAGGTGTATTTCATGGCCATCATTGATATCCTCACACCATACGATGCTAAGAAGAAAGCTGCGCACGCTGCCAAAACAGTGAAACACGGGGCGGGGGCCGAGATCTCGACTGTGAACCCTGAGCAGTACTCCAAGCGCTTCAACGAGTTCATGTCCAACATCCTGACGTAGTTATCGTCTACCTTCAGCCAGAGCCAGCGTGCTGGATGTGGGGTCGGGGATTGGAAGAGAGAGAAGGTGTTATCTGGGCTAGATGGGAGGGCGGGGAGCAGAATGGGGGTCGGGGAGGGCTTTAGCAAGGTGACTGCAGCCTGTGACATTGAGAGAGACTCCAGCAGGAGGGGAGGGGATGTGCCATGCGTGCGTGTGCTCACAGGATGTAGCCTCATCTGCTTACCCTTGATTTCCCCGCCTTTGACCTAGGTTAAAAAGGTGTTTCCTTTTTGTTGCCTTGTAACGTTGTAAGATACCTTGGGGCTAGAGATGATTTTCTGGGTTTATTTGGGGTTTGTTTCTGAAATCTCATTGCTCCAGATTTGCTATTTATAATGATTTATGTCATCACCCTATCCACCATCCCCGTCCCTGCCCTGCTCTCCGTTCCCTCAATTAAAGAAGCACGCACAGACCCAGCGAAGGGTCCTCTCAGAGCAAAATGCTCTGGTGCCGGAGAAGAGGTTAGACACCTCGGCCCTGCTGCGTTTGATCTTGTCTGGTTGACTTAGTTTCATGGAGTATTGTGCACAGCTTCCTCTACCTTTCTGGCCTTAGCTCCAAGTGAAATGTTACATAGTTCCTCCATCTAAACGCTGTCCCTCCCAAAGGCGTGCTCCAGGTCAGCATCAGGCATCTTGGAGCAGAATCAAAGAGCTCAGAGGGGAATGAGTTCATCCTCACGGGATGGTCAGGGGTTGGGGGACCACTGGTTCTCAGAGAACCCCATGATCATCACCCAAGCCCCAGGCTCTTTGCAGCCCCTGGAGTGCAGACATCATCTCTGTGAATGAAGCCTGTCTCCCACTGAGTCAAGAGGAACTAGAAAGCACCTCTGGATATAACAGGACCCTCATGCTTACATGGTTATTTCCCCTTGAGAAAACTCCAGAAAAGCTGATGAGTATCAAATGAGGTCTTGTGCCCTCCATCCATTTGCTTCCTTCAGATCTTCTCCCAGGCATTCTCATTTGTAGGTGAGCTTTTAGCCAGGGCCTGGGGCACTCCTTACAGAGATACCTCTTCAAGCCCCAAGGCTTCCATGCAGTAATGTGTCACCTGGATGGTTGTGGCCAGCAGGAATGGTGTACCCCACCCTCCCCTTTGGAGTGTGCCACCCAAGCCTGAGGTTGCTTCTGAGTCACTTGAGGATCTGACCTGGGAAATACAATTTGGAGGCCTGATGTGCAGTTCAGCCTGGCCCAGCCTTGGAGCTGTGTTTCCTTGATGCATAGACTTTTTGCATACCTGCCACCACAGGCCTCCTCAGGAGTGGCATCTGGCTGCTTCCTTCAGGATCTCTACCACCTTCTGAACCTGCTACTGAGGCCTCAGAACTGCGTCCTTTTGTGAGGCCATCAGAGCAGTCTGGCCTGGTCAGGAGAGAAAACAACTCTGTGCTGGGGGAGGTACATTCCTGCGTCTTCTCACCTCCTCACCAGGAACTGGGGACTTGGGATGAGATGTGGTGAAACTTGTAGATAACTGCAAATGGAAAGGAAGTTTGTGGAACCATTTTGAATGAATGGATTGGCTTCTTAGGCTTTCTTCAACCTGGCCAAGCTCAGCTTCTGAAGCAGGAACCAGCAACATCTCTGTGCCCGATGCACAGCATTTAGGTCAGGGAGGAATGGAAACCATGTTCTTGGACTCTACTGGGCTGTCGGAACCCTTCTGGAGAGGCAAATGGGCCAGACAACTGCCCTGACCCCCGAAAGGGGCTGTAGGTATCTCTGGACGTCAGCAGCAAGATCGCGAAGTGACTTGGGAAACTTGTACCAAGTGGCTCATGGAGAAACAGATTTCACTTAGGGAGGGGTTAGTAGGAATAATGTCTGGACTTGATTTCCCCATCTTCTAATCAAGAATGAAAATTTGAATCTGCTCCTGGTCGGGCCCAGCAACTCCCGAGCTTGGCAGGCTGTCCTCTCGGGGCCTCCACAGCCCTGGGCTCTCTCCAGCTTCCTGCCATTTGGTCTGCTGATCATGTCCCTCATAATGTGTATGAAAAGTGTAACCAATTGTTCCCAGTTAAAGGTGAGCTACCAGATATCTAACTTCTTTAACATTGAGTTTTTGTGGGGTGTGTGGTTTTTGTTTTTTTTTTTTTTGTATATTGTTTACATTTTGAGAGGTAGCATTCTGTTTTAAATGCTCTTTTTGTTTTTCTGACAGTATTGTTGACTGGGTCAAAACATTTAAGCTGTGGTTTGGTGGATTTTAAATTTTTTTTAAAGGTCATTCTCTGCTATCTTCAAAACCTTGGGTTTGGTCCTTTAATTCCTTTGGCATTCAAATATCTGAAAGCTATTTATCTTGGTTTATACAAGGTTTTTCTCTTCTTTTTGTTAAGGATGAAGATGTTAAATTTGGTTTGCAGTTTGAATGTAGAGAAAGTGAAGTGATCCCCAAATTTTTGTCTGTCCCTGCTTTTTTCCCAGTCCTACCATGCCTTGTCTGGGCAGTAGAAGGCGTCCAGGGGCAAGTGACTACCCTCACCATCACTCTGGAGCCAAGAAGAAAAGCTGAATGGTTTTATGGCATCCCAGAATAATTTGGGGTCTTGTAAGAACAAAGGCGTAAGAACAGGACACAGCTGCCTGGATGGGGCCTGGTTGGGGATAAGGGAGGATTCTTCTCCATTCTCTCCCTCTACCACTTAACTAGTCACAGCTCCTCCCATCCTGCCCCTCTTCTTCTGAAAGTCTGTGCTGAGAAAACTCTCATCTCCTAGGTCTCCCCACCAAAGCGAGAGTTCCCCTGAAAACTCCACCTCAACCACTAGAAGGCGGCCTCTGGCCCTGGTTCCTGTTAATGAACCACTGAGTCTTCATCCCCCAGTACGAGCTCCTTCCCTGTGCCTTCCAGTGTGGGGGCTACGGGGCAGGCTAGGAAGCCAGCAGTTCCAGGGGCACAGCCCGAGGCAGTGCTCCATGTCTCCTTATTTAGCTCAGGGGTTACTGGTCTGTGGCATGTGCTACAAGTCGCCCCTGTGGCTGAGTGGCACTCCGTAGGTCCCCACTACAGGCAGCTTATCCTCCCTGCTCCCTCTTCCTCCTTGCGTTCCTCTTGCCTGTTTAGGCCTCACACAGGTTCCCTGGTAGTGCTCAGGGCTTGGGACTACATGCTCCTGCCCTACTTTCCCCTCTTCACAGTCTGCCAGGGTCTGCCCCGAGAGGTGGACCAAAGACCCAGGACTTTTCTCAGTAGCCAATCCCACCCTCCTCTAATTGTCTTTTTATCAAGTTGAAGAGAAAATTTCAGCAATCCCCAGCATTTGAGCTACTCAAATGTTAGGGGCCAGAAGGGACGGTGTGTTTAAAACCACCCTTAAAAGGCTCTGGCCTTAGACCTGTGGCTCCCCCAGTTCCAGGGACCCCACATCTTTCTGGCAGAAATGTGGGGAGGGGGCTCCAACCTGAGCACAGGAATCAAAGGGAAAACATTCAAACTGCCCCCAAATCTACCAGCCATCTCCAGGGGCTCTGTGACGCAGCCCTGGCCTTCTGAAATGTGACACTTAGGAAAAGTGTCTCCAAAGGGAAGAGGAGACCTGGCTGTCCCTGGCGATCCTTTGGAGGCTGGGGGAGGAAACTTCCAGAGGAGTCCCTTCTCCTTGCTCAGAGCCATTTTGGGAGGAAGTGGGAACCAACAGCCTTTGGGGGTAAGGCCTGGTGCCACTCAGCACACCCAAGCATCAGGTCAGGTCCTTGTAGTAAAAAAATGTGAAGTTTAGATTCAGATTTTGGGGGAGCAGGATAAACTACCACCCTACCACGTGTGTGACTTCTCAATTTCCCACTGCAATTTCCATCTTTTTAAATAGGAATTTTCAACCCCCTGTGCTTGTCTAATGTCTGCTCGGAACAATTCGAGACCCTGTTACTGTTTTAAGATGCATGCATGTTAGAAGATGAATCTCCAACCCGGGGAAAAAAATAAAACTCAAAAAAGCTTTGTGTACACACTTGTTATATGTGAGTCCTTTGGAAATAATCCTTTTATCTTTTTCCTAATTAGAAGGTTTTGGTCTCAGTTTCAGGGACTGCTTGGGCTAAATCTGGGCTTGAGTTTGAGTAAGAGTCAGGACCTTTGGTCACTCATTTTCAGATGCTGTTAATAAGCAGTGACTAAGGTGGTGCTTAAGAGACATGGATTCAGTAGGTGGGTTTGGAAGATCCCCTGAGGTGGCAATGGCAACCACTTCAGTATCCTTGCCTGGAGAATCCCATGGACAGAGCTTCCAGGCGGGCTACAGTCCATAGGGTCACAAAGAGTCAGACATGACTGAAGCGACTTAGCATGTACATCTGCAGGGCCTGTGCCCCTGGAGGGTCCACCTGTCAACCACATTTACCCTCACCCTTGCCCTCTCAGAGGAATGGACAAACTGCCCACACTTCCCCAGTACGTACAGCCAGCACTTGGTGGAAGCCACACATCTGTCCCAGCTCTCCCTTGACTAGCTATGTTGACTTTTAACAAGTCACTTCTACATGCCTCCAGTTCTCCACCTAGACTTTTAGCTTAAAATCTAGTGGTTCTCAAGAGTGTGGTCCAGGACCACACCTAGGAACTTATCAATCCTCAGGGTCCTCTGCAGCTTGGGACGAGAAACTGCTTTATCAAGCCCTCCTGATGATTATAATGGAG EMBV3_36402 TCCATGTCTGTTGCTATGGTCTTTATTTAGGACAGCGATTAACAATGCAGTGGCCCGTTC Gene GeneID:777770|KIF3C:NM_001078155:258_cdna Constitutive 0 NULL GeneID:777770 11 GENE KIF3C MGC139476 kinesin family member 3C EMBV3_18604 TCGGTTCCCCCAAAAGGCTCCGAAGCGACCTGAACCAAACAGTAAGTTTTCCCCTACCTT Gene BVT0102_110360 + 0 NULL GK000002.2:82928445-83405174 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06812 ATGTTCATTCTTGTCTCCTATGTCCTGATAATCCGTGCTGTCCTGAGCATCGTGACCCCC Gene GeneID:782473|LOC782473:XM_002693319:180_cdna Constitutive 0 NULL GeneID:782473 15 GENE LOC782473 NULL similar to olfactory receptor, family 51, subfamily T, member 1 EMBV3_09280 GGACACCTCCTCTGTCTCTATTTACTAGCCATGTGAACTCGGCCAAATCACTTCACCTCC Gene GeneID:616492|DDN:NM_001102301:122_cdna Constitutive 0 NULL GeneID:616492 5 GENE DDN MGC148577 dendrin EMBV3_17409 TTTGATACTAAACCTTTTGTATAAAATATTGTTATAAATGATCTATATATTCAGACTGAA Gene GeneID:524796|ZFP37:XM_002689934:84_cdna Constitutive 1 NULL GeneID:524796 8 GENE ZFP37 NULL zinc finger protein 37 homolog (mouse) EMBV3_25262 TCCCCTAGACTGTTGGGTTCTCCCCTTAACACTCTTGCGATACACTGTCAGATACAACCC Gene BVV0101_033456 + 0 NULL GK000010.2:10151270-10242750 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18810 TCCTTTACTTTTAAAAAGTTGTGATTGTACTTATGACGCCGTACAGACGCAAACTTAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07543 CACAGGTGGTCCTACCTTTTTACACCTCTACTATGAATGTCTGAGAGCTCTGGCTGCATC Gene GeneID:507296|STAP1:NM_001077868:26_cdna UTR3_Alt 2 NULL GeneID:507296 6 GENE STAP1 MGC151890 signal transducing adaptor family member 1 EMBV3_01184 GGACTTGAACCAGTGGATTTCCAGCCCCAGGACTGGACTGACTATGACGAAAAGGCTCAG Variant GeneID:517857|C3H1orf123:NM_001038130:55_cdna 383^448 5 EMBV3_18967 GeneID:517857 3 GENE C3H1orf123 C1orf123 MGC133492 chromosome 1 open reading frame 123 ortholog EMBV3_32324 AAGCCATAGTCTTTGACGTCCCTCCCGAGAACATTGACCAAATCCACCTGTCCATAGCAG Gene GeneID:536969|SYT9:XM_002693139:39_cdna Constitutive 0 NULL GeneID:536969 15 GENE SYT9 NULL synaptotagmin IX EMBV3_02584 GCTGCCAGAGGAGCAGAAGAAAACGGTCCCTCCCCCTCTTAAAACACTTTAAACTCAGGG Gene GeneID:512590|RECQL5:XM_002696177:157_cdna Constitutive 0 NULL GeneID:512590 19 GENE RECQL5 NULL RecQ protein-like 5 EMBV3_08083 CAAAATCCATGAGGAGATTGACCGCGTGATCGGCAAGAACCGTCAGCCCAAGTTTGAGGA Gene GeneID:540707|LOC540707:XM_002695063:431_cdna Constitutive 0 NULL GeneID:540707 18 GENE LOC540707 NULL similar to cytochorme P450 2A19 EMBV3_04402 ATGCCTGAACTGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:781729|LOC781729:XM_002686747:39_cdna Constitutive 0 NULL GeneID:781729 4 GENE LOC781729 NULL similar to histone H2B EMBV3_25499 CTCAGGTCTTCTCTAGTAACCATTTGCCGCCGTGAGTGGCGTTGGGGCCATTTCCCTTTT Gene BVT0102_266584 - 1 EMBV3_23596 GK000007.2:1451226-1452958 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211405 TCONS_00211406 TCONS_00211404 TCONS_00211403 1 XLOC_129863 Coding TCONS_00211403 XLOC_129863 Coding Coding MAML1 7:1422319-1452635 = TSS158866 3490 1 TCONS_00211403_4 576 6 0.885073396008577 0.00247848621666988 0.00134193122540301 0.00158881057080792 0.000648283471702014 4.67296686521489e-08 0.000195997824753538 0.000860138717051749 0.000691542279544415 0.00155841398629625 3.4213806434587e-05 1.78570241369622e-05 2.38363872130613e-11 1.55519618992134e-10 0.000584965238982989 3.7467582083148e-05 0.000252450989484338 0.000128431407601481 0.0003813621478552 0.00134316736704273 0.00196511553530369 0.00109625513796986 1.38915453009538e-05 0.000162719987833235 0.000148505196374531 0.0024269816948089 0.00294871547548074 0.00134443344866768 4.66465447374858e-05 0.000119614810894031 0.000130898314663752 XM_002688497.2 MAML1 PREDICTED: Bos taurus mastermind-like 1 (Drosophila) (MAML1), mRNA. 0.0 4273 100.00 0.678510028653295 NM_014757.4 MAML1 Homo sapiens mastermind-like 1 (Drosophila) (MAML1), mRNA. 0.0 2605 77.54 0.92865329512894 TCONS_00211403_4 sp|Q92585|MAML1_HUMAN MAML1_HUMAN Mastermind-like protein 1; 0.0 766 86.17 0.861111111111111 0 coding 0 0 0 0 -0.185609724921455 0.158525074017784 0.0528154681130738 0.309992583170031 ATGGTGAGCCGGAGTCCTGGCAACTTCCTCAGAACTTTGGGGAGGGGAACTCGGAATGGGAGCGAGATTCCTGAGGGCAACTTCCAGCCTCTCGTCATCCTGAGGAAGACAGAGCCAACCCAGGGTTGGTTTGAAGTGGGTTTTGGTCAGTGGCAACAGAGTCCAGACTGGCAAGCGAGCACGAGCCATGCTGTGGGAGGGACCGAGCAGCTGGATTCTGGGGCCGCCTTTGCTGCACTGGCTGACTACAAAGCAGACTGTGGACAAGGCGGCCCTGGGGCTGGCCAGAGCAAGCCGGCCCTGATGGCTTATCTTCCCCAGCAGCTGCCTCATCTTAGCAGTGAGCAGAGCTCCTTATTTCTGATAAAACCAAAGCCAGGAAATATGCCCTTCCGATCACTGGTTGCACCTAGCCAGGACCAGAACCCTCCCAATGTCCCTGTACCAACCCAGGCTGCCAGTGTGGGGACTCAGCCGCCTGCTGTTTCCGTGGCCAGCACGCACAGTAGCACCTATCTCAGTAACCAGCAGCAGGCAGCAGTAATGAAGCAGCATCAATTGCTTTTGGACCAACAGAAACAGAGGGAGCAGCAACAAAAACATTTGCAGCAACAACAGTTTTTGCAAAGGCAACAGCACCTTCTGGCAGAACAGGAGAAGCAGCAGTTTCAACGCCATCTGACCCGACCGCCCCCCCAGTATCAAGACCCAACACAGAGCACCTTCCCACAACAGGTTGGACAGTTCACAGGGTCCTCTTCTGCCATGCCTGGCGTGAACAGCTTGGGTCCATCTAACTCCAGCTGTCCCCGAGTGTTCCCTCAGGCTGGGAATCTGATGCCAATGGGCCCTGGACACACTTCAGTTTCTTCTCTTCCCTCAAACTCAGGCCAGCAGGACCGGGGTGTGGCTCAGTTCACTGGCTCCCAAAGCATGCCACAGAGCAGCCTCTACGGCATGACTTCCAGCATAACCCAGATGGTTCCCCAGCCTCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAGCGTGGGCCAGAACACCTCGGTTTCAGCTGCCTATGGACAGAACTCGCTGGGGAACTCTGGTCTCTCCCAGCAGCACAGTAAGGGGACCCTGAACTCGGGTTTAACTAAGCCACAGGTCCCCAGGGTATCAGCAGCCATGGGAGGCCAGAATTCCACGTGGCAACATCAGGGAATGCCGAACCTGAGCGGCCAGCCCCCGGGAAACAGCGCCGTAAGCCCGTTCACTGCAGCCTCCAGTTTCCACCTGCAGCAGGCCCACCTGAAAATGTCCAGCCCGCAGTTCTCTCAGGCGATGCCCAGCAGGCCCATGGCCCCCATGAGCTCAGCAGCTGTGGCAGGGTCCATGCTGCCCACTGTGAGCACACAGCAGAGGACCAGTGCCCCTGTGCCAGCACCTCCCCAGGGAGCCCCGCAGCAGGGCTTGTCGGGCCTGAGCCCGGCGGGGCCTGAGCTGGGGGCCTTCAGCCAGAGCCCTGCCCCAGCCATGGGCGGCCGGCCAGGCCTGCACTGTGCCCAGGCCTACCCCGTGCGGACCGCAGGCCAGGAGCTGCCCTTTGCCTACAGTGGGCAGCCGGGCAGCGGCGGGCTGGCCAGCATGGCTGGGGACGCCGACCTGATCGACTCCCTGCTGAAGAACAGGACTTCCGAGGAGTGGATGAGCGATCTGGACGACCTCCTCGGGCCTCAGTAGCAGGAGGATTTGTGGTATTTTCAGTGTTCACACAGCCTGTAGTTTTGTTCTCAGATTCAAGAAAGAGTAACTGCTTTGGACCAAATCCCACAGCCCAGGGAGCCGGGCAGGCAGAGCTAGAGCCGCAGAGCCGAGGCCTGGTCCTCCCGGGACCGTGGGGCCCACGGCTCCCAGCCAGCAGTTGGGATGTCGGGCTGGCCCCCCCATCTGCTGGTGTCACTGTATGGGGTTGGGACAGCAGGACTGGGTTCTACGGGGGTTTTTTCTATCCATAAGACCAAAAAGCCAACCGTAAAACCCCACGATGCCAGCTTTATAAAAATCTGTGCTATCATTTTGATCTAATCCAAGATTTCTCCACTTGGCCCAGTGTTGGGACAGATTTTTGTTGAAACTTTATAGTGGAACTATTTGCAATTTGTAGCATAGAAAAGATTTTTTAAAGGTTTTAAGGTTTTAAAAGAGGTTAGGGTAGGTGGTTAAAATCTATAAGTGGCATTGGAAACTTAGGGTTTCCTTTTGATTAAGAGCCTTTTTTATTCCTGCTCTTTGTCAGCTTTCAGGACAAAGAGAGGCTCACTGGAAAATTGCATGTGCCAAAAAGGAACAGGATGCCGTGAGAAGCAGAGCTAGTGGCAGAGATACAGTCGTTACTGCAGCCCCGCGTTCTCCCAGAATGCTGTTCTTCCAGGTTGGCATTTAGGAAGAGTTGGGCTGAGGAATCCCTTCCTCCAATGTTTTCAGAGCAGGACCCCAGGCTAAAGGCTGAAATACAAACTGGGGTTCCTGTGTCTCTTTTGTTGTGACTCCTCACCTTTTGCAGTTTCTCTGGAGACTCGTATTTAATGTATTAGGAAGGTGATCATTGTTGAGTTGTGCACAGATGTCTTTTCTTTCACCCTATCTTCATTTCCCATAACCGTTCTTTCTGCCTCCTGTTCTTTATATCTCCAGCCCAAGTGGAAAACCTCCTTATGGCACTAATTTACTAGATTGGAGAGGAAAAGAGTCATTAGAATTCCCCAGGGAACCCTAGCGCTGTAAGGAGGCGGGTGTCCCCTCCCCAGAAAGCAGAGGTTCAGGGGAAGGAGGGAAAAGGACACAGGCCAGAGGAAGGGCCCCCGCTCCACTCTGCTCCCGCTGCCGCTGCCTCTTCAGACGACTTGCACTTTCTAGAGAGAATTGCTGTGTAACACTAACACGTCCTTGCTAAAAACTCAAGTGGATTTCTCTTTTAAGGTCTGTGACTGTCTAGGTCTTGACTAAGCTAAGAGTCCACATAGTATTACCTGTGGGCTGTTTGTGGAAAGTGAAGACGGAGAGAGCACTTCAATATAGCAAAAGCAAAATGGTAAGCATAGGGTGGAACTCTTTCAAATGGAATATTGGAGGGAAAATAGTACACTGAAAAGAGTGGCTTATATGCAGAATGATCTCTGGCAAAATCACCACCCCATTTTTATTTCCCTGGAGTTTCAAAATGGATAATTCAAGGAGTATCATACGTAAAGAATTGAGCCAGGAAAAATGCTCACACAGCCAGCTTGAGTGGCTTTGAGGGGATGAAGGGTTGTGCACACATTGGTCGTTACTTTGCACCAGCAGTGCCTTTCATGGGGGTGCTTGGACCCTCAGGTCTTCTCTAGTAGCCATTTGCCGCCGTGAGTGGCGTTGGGGCCATTTCCCTTTTATCTCCCTCGCAGCCTTCCCCGGAGGCTGAATATAGCTCAGAGAAAGGGATGCATCATAAAGCCAGTNN EMBV3_43703 TTTTAAGTGGTTCATTTGTCTCTGAACGTGGCTCTCATCGCACAGGAAGGCCTGGTGTGG Gene GeneID:100299267|LOC100299267:XM_002694806:654_cdna UTR3_Alt 1 NULL GeneID:100299267 18 GENE LOC100299267 NULL similar to pyruvate dehydrogenase phosphatase EMBV3_29766 TGCCTGGAGGTTGTTTATCAAGGAAGGAAGTTATTAACGCTATTCGAGTATTGTGCATTC Gene GeneID:506848|SIKE1:NM_001075281:29_cdna Constitutive 3 NULL GeneID:506848 3 GENE SIKE1 MGC142423 SIKE suppressor of IKBKE 1 EMBV3_22937 TGTTACGTGTGTTTTCTTTCCCTGCTTTGGAGATGGCGGGCGAGTTATTGGTGGTGTTAC Gene GeneID:532376|MAFB:XM_002692462:509_cdna UTR3_Alt 1 NULL GeneID:532376 13 GENE MAFB NULL v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) EMBV3_15881 TGGCTCTCCGGTTCTGCACGGCGCGAGGCGACCCTCTGACCCTGCAGGGCAGGATGACGT Variant GeneID:785237|ULBP1:XM_002690326:16_cdna 101^403 1 EMBV3_01833 GeneID:785237 9 GENE ULBP1 NULL UL16 binding protein 1 EMBV3_07779 GTTCTGGATACTGGATCGTTTTGTCTTTTCGGACCTTTTCCTGGGCCTGCCTAACCATCG Gene GeneID:521806|DLX1:NM_001099017:10_cdna Constitutive 0 NULL GeneID:521806 2 GENE DLX1 MGC159912 distal-less homeobox 1 EMBV3_43548 CCAGGAGAGAAGATTAGTGCCACACTGAAAAGAGAATTTGGTGAGGAAGCTCTGAACTCC Gene GeneID:517589|NUDT9:NM_001101096:19_cdna UTR3_Alt 2 NULL GeneID:517589 6 GENE NUDT9 NULL nudix (nucleoside diphosphate linked moiety X)-type motif 9 EMBV3_24343 GATAGCCGTGGACCGCATCTCCATAAACAAAATGGTGGTTGCTTGTTCTGGCGGATGTCA Gene GeneID:524173|LOC524173:XM_002699310:307_cdna Constitutive 0 NULL GeneID:524173 29 GENE LOC524173 NULL similar to pregnancy-associated glycoprotein 4 EMBV3_00626 GGAATAGATTTTCCCTAGGTCGTAGAGGGGGAATTGTGCTCTTTGAGTGTGGGAGGAAGC Gene BVT0102_370966 + 0 NULL GK000023.2:13677478-13775521 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30067 TAATGCCCACCTTGCAGAGCTGTTGTGAAGATTAAGGAGATAAGGGTGGGACTTCCCTGG Gene BVT0102_056343 + 0 NULL GK000003.2:15948351-16025764 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28245 GTCTCTCTCAGCCCACTACCCATCAGTCCCATTACCTTTCTCTATTCAAAATCACCTTGG Gene GeneID:787969|CASC5:XM_002690821:68_cdna Constitutive 0 NULL GeneID:787969 10 GENE CASC5 NULL cancer susceptibility candidate 5 EMBV3_25171 GGCCTACAGCAGCTTCGGCGGCGGCAGGGGGTTTCAGGGATGACTTCTTAGGAGGCCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41585 CGTGTCCATCCACTTCCCAGAATCCCTCTGGTTAGCATCCATCTTGGCTGAGCGATGCAT Gene BVT0102_298405 + 0 NULL GK000019.2:20307089-20364622 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142890 TCONS_00157798 TCONS_00211422 TCONS_00212494 TCONS_00030450 TCONS_00147216 TCONS_00211424 TCONS_00092644 TCONS_00236493 TCONS_00072589 TCONS_00092645 TCONS_00070504 TCONS_00092646 TCONS_00236492 TCONS_00118979 TCONS_00107044 TCONS_00156280 TCONS_00055172 TCONS_00147215 TCONS_00099095 TCONS_00049203 TCONS_00145444 TCONS_00236494 TCONS_00147214 17 XLOC_087315 XLOC_096253 XLOC_129868 XLOC_130204 XLOC_016703 XLOC_089317 XLOC_056941 XLOC_144487 XLOC_044357 XLOC_042282 XLOC_072791 XLOC_062970 XLOC_094957 XLOC_032980 XLOC_059338 XLOC_029334 XLOC_088834 Coding TCONS_00145444 XLOC_088834 NonCoding NonCoding - 25:37464450-37473391 - TSS108998 1587 2 TCONS_00145444_2 50 0.363579080025205 2 0.822706935123042 0.000823028408697937 7.71857070100044e-17 6.8028207491104e-05 0.000149831401345858 2.40407456880621e-05 0.000139746543371421 0.000121560402230346 7.00139003147045e-06 0.000375424643418696 0.000196665467065558 5.90831706757321e-06 0.00012515647381603 5.35913105258049e-08 3.09769088701551e-05 7.34603432832151e-12 0.000262681215759302 7.42686534909382e-05 0.00196665917438157 0.000319619148233579 0.00163858282363135 0.000166804855103272 6.4850615798416e-05 0.000290638717604121 0.000411985242052913 0.000297821099238936 1.85637680515868e-51 0.000178365149381344 0.000112035882961901 2.5815857764569e-05 0.000378016919535794 XM_005196997.1 LOC101910028 PREDICTED: Bos taurus zinc finger protein ZFP69B-like (LOC101910028), transcript variant X4, mRNA. 0.0 1054 100.00 0.367359798361689 XM_005250282.1 ZNF789 PREDICTED: Homo sapiens zinc finger protein 789 (ZNF789), 4e-15 87.8 74.81 0.0819155639571519 0 noncoding CGAAACTGGGCTCTTGTCTAACACTCGAAAATGAATTGTCCAAGGAGACACATGTGCTGACAAAGCAAGAGATTTTATTGGGAAAGGACATCCAGGTGGGGAGCAGTAGGGTAAGGGTGGCTGGCAGTCTTGGGTTTTATGGTGATGGGATTAGTTTCCGGGTGGTCTTTGGCCAATCATTCTAATTCAGAGTCTTTCCTGGTGGCGCACGCATCACTCAGCCAAGATGGATGCTAGCGAGAGGGATTCTGGGAAGTGGACGGACACGCAGTGTCTCCTTTTGACCTTTCCCGAACTCTTCCAGTTGGTGGTGGCTTACTAGTTCTGTATTCCTTATCAGGATCTCCTGTCATAAAACAACTCATGCAAATGTTTACTATGGTGCCTGGCCAGGGTGGGTGGTTTCAATCAGTGTGCTTCCCCTAACATGTACATGACCTTCCCAAACTCCCTAACTGTCCCCCTCTTCCAGTAACCATAAGTTTGTTTCGTGTCTGTGAGTCTCTGTTTTATAAGTTCAAAATATTTTTTTTAATGAAAGTGAGTCCTTTGTTTTTTTAGTACTGATCTCCATGGGATTTATTTACTTCTTTAGAAATGTGGTATCTCAGTGCCCTGACTAGGGATCAAACCTGCACCCCTGCATTGGAAGGTGAAGACTTAACTGCTGGACCACCAGGGAAGTCCCTAGTTATATACTTTTGAATTGTGATACTCCACCAAAAAATATGAACAAGTTTATTGTGAAGTACTGCCAACATATAGGCAAGCGTAGACTAGAACAATTTTAAAGAACATTCACAAATACACCACACAGATGAATCAATTCTTGAGTAGGACATATTTGCTTCATATCATTTTTAAGGAAATAACACACTTGTAATAAATACCATGTATACTCATGAGCCCTCCCTAATCCCATTCCCTCACCTTCAAGCTGACTCATCACCCAAGAAGATGACGTGTCTGTAGTTGTCCAGCATCACGTCCCTGTAGAGGGCCTTCTGAGCCCAGTCCAGTGTGTCCCACTCTTGCCTGGTGAAGTACAGAGCCTTGTCCTGAAAGGACAGCAACCCCTGGAAACAGACTCATTATAGCTGCAGCTCCTACCACAGCTTTGTGGGCCACAGTATTATTGTCCTACAGCCGAGGCTCATCCAGTGAATTTGCAGACTCAGGGCTCAACTCGTCTCCAACCCTCAGGTCACAAATGTTCTTTCTTCCACACTAGAGTCACACGTGTTCTCTCTGGAAGGACACATGGTCAGTATGTGAGGCTTCTCTGGCCGTTTGGTCTCTGCTGTGGTTACTCAACTCTACTCTGGCAGCATAGACAACAGGAGAGTGGACGGCTGTGGCTGTGACCCCATAAAACCACTCCCGGGTCCAGATGGTGAACTTTGACTTGCCAGGAGAGAAAAGAAGCCCAATTCTGAGCTCAAAGTCATCAGGGATCCCCTACGGGATCAGAGCTCTCTGGATCGTAAGCAAAACTATGGCATTTGATGTCATTAGTCACAGTGGAAGTTTTATGTCACAGTAAGCAGTATGAAAAATAACTTTTTTTCAATAAAGTATTGAAAAATA TCONS_00145434 TCONS_00145435 TCONS_00145436 TCONS_00145438 TCONS_00145440 TCONS_00145441 TCONS_00145442 TCONS_00145443 TCONS_00145439 TCONS_00145437 s 3' 554 TCONS_00145434 TCONS_00145435 TCONS_00145436 TCONS_00145438 TCONS_00145440 TCONS_00145441 TCONS_00145442 TCONS_00145443 TCONS_00145439 TCONS_00145437 s 3' 554 EMBV3_23608 AAGAACCTGCTGAAGAAGGACAGGTATGTCTTCCCCCTGCCCTACCTGGGCGACACGGAC Gene GeneID:504604|SOX14:NM_001163781:15_cdna Constitutive 0 NULL GeneID:504604 1 GENE SOX14 NULL SRY (sex determining region Y)-box 14 EMBV3_20167 TGAGATCCAGCCACCCTTCAAGCCCAAAGTGTGCGGCAAAGGAGCAGAGAACTTTGACAA Gene GeneID:282001|PRKCA:NM_174435:10_cdna Constitutive 0 NULL GeneID:282001 19 GENE PRKCA PKRCA protein kinase C, alpha EMBV3_33591 GGGAGAAAGAATTGGCTGTGGGAAAGGACCAAGTATTCAGCAAGCAGAAATGGGAGCAGC Gene GeneID:540168|RNASEN:XM_002696389:126_cdna Constitutive 0 NULL GeneID:540168 20 GENE RNASEN NULL ribonuclease type III, nuclear EMBV3_30439 CCCTGACTTCTTGAAAGTGACCCAAATCCTAGCATGTCCATATTAACAGAGTCAACAACT Gene BVT0102_265051 - 0 NULL GK000011.2:78667558-78693785 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025629 TCONS_00025626 TCONS_00025645 TCONS_00025630 TCONS_00025632 TCONS_00025643 TCONS_00025635 TCONS_00025647 TCONS_00025625 TCONS_00025637 TCONS_00025646 TCONS_00025641 TCONS_00025628 TCONS_00025648 TCONS_00025633 TCONS_00025634 TCONS_00025627 TCONS_00025640 TCONS_00025638 TCONS_00025639 TCONS_00025631 TCONS_00025636 1 XLOC_014797 Coding TCONS_00025648 XLOC_014797 Coding Coding PUM2 11:78579469-78670099 = TSS18559 6219 1 TCONS_00025648_7 1007 19 0.931589226406559 0.000572564373561715 0.00132929079447387 8.63108769881738e-09 0.000382937198437048 0.00107794378205599 0.000491436394728232 0.000670158601554283 0.000546143027678594 2.49996960676444e-05 0.000154724977980471 5.63951429215811e-05 0.000173331111649681 3.05250121686267e-28 0.000224103786514524 9.63797236175819e-20 0.000624265285132539 0.00580689211605902 0.000162782495716847 0.00111223467544198 0.000184494281760886 0.00033199001857879 1.8647183892083e-08 0.000882859999217284 0.00148580967093188 4.05394595096953e-13 6.35389633898293e-10 0.00130584854691086 0.000292522163491078 0.000259305917920909 0.000599061467215033 XM_005193970.1 PUM2 PREDICTED: Bos taurus pumilio homolog 2 (Drosophila) (PUM2), 0.0 1.061e+04 100.00 0.945489628557646 NM_001282752.1 PUM2 Homo sapiens pumilio RNA-binding family member 2 (PUM2), transcript 0.0 8583 91.95 0.958835825695449 TCONS_00025648_7 sp|Q8TB72|PUM2_HUMAN PUM2_HUMAN Pumilio homolog 2; 0.0 1694 98.02 0.999006951340616 1 coding 1 1 1 1 -0.0102495070496326 0.920328408104528 -0.00570695352705058 0.910040924036277 GTTTGATCTGTGGATGAAATGAATCATGATTTTCAAGCTCTTGCATTAGAATCTCGGGGAATGGGAGAGACCATTCAATGTCCCAGCCTATTATGGTACAGAGAAGATCTGGACAGGGTTTTCATGGAAACAGTGAAGTAAATGCAATATTGTCTCCGCGATCAGAAAGTGGAGGCCTTGGTGTGAGCATGGTAGAATATGTATTAAGTTCTTCTCCTGCTGATAAATTGGATTCTCGATTTAGGAAGGGAACTTTTGGCACTAGAGATGCTGAAACAGATGGACCTGAGAAAGGAGATCAAAAAGGCAAGGCTTCTCCATTTGAGGAGGACCAAAACAGAGATCTTAAGCAAGGAGATGATGATGATTCTAAAATAAATGGCAGAGGTTTGCCAAATGGAATGGATGCCGATTGCAAAGATTTTAATCGTACTCCTGGAAGTCGTCAAGCCTCTCCAACTGAAGTAGTTGAGCGCCTGGGCCCCAATACTAATCCCCCAGAAGGACTGGGGCCTCTTCCTAATCCTACATCTAATAAACCACTTGTTGAAGAATTTTCAAATCCTGAAACTCAGAATCTGGATGCCATGGAACAAGTTGGTCTGGATTCCTTACAGTTTGACTATCCTGGTAATCAGGTACCAATGGACTCTTCAGGAGCTACTGTAGGCCTTTTTGACTACAATTCCCAGCAGCAGCTTTTTCAGAGGACTAATGCACTAACAGTTCAGCAGTTAACTGCAGCTCAGCAGCAGCAGTATGCATTAGCCACAGCTCAGCAGCCACATATAGCTGGTGTATTTTCAGCAGGCCTTGCTCCAGCTGCATTTGTGCCAAATCCATATATTATTAGTGCTGCTCCTCCAGGGACTGATCCGTATACTGCAGCAGGATTGGCTGCAGCAGCTACATTAGCAGGTCCGGCAGTGGTTCCACCTCAGTATTATGGTGTTCCGTGGGGGGTGTATCCAGCCAATTTATTTCAGCAGCAAGCTGCAGCTGCGGCAAACAACACCGCAAATCAACAAGCAGCATCACAAGCTCAGCCTGGACAGCAACAGGTTCTCCGTGCTGGGGCAGGTCAGCGCCCTCTTACTCCCAATCAGGGCCAGCAAGGGCAGCAAGCTGAATCACTTGCAGCAGCAAATCCAACTTTGGCTTTTGGTCAGGGTCTTGCTACCGGCATGCCAGGCTATCAAGTACTAGCTCCAACTGCCTATTATGATCAGACCGGTGCCTTAGTGGTTGGCCCTGGGGCAAGAACTGGCCTTGGAGCTCCAGTTCGATTAATGGCTCCAACACCTGTTTTAATTAGTTCAGCAGCAGCACAAGCTGCAGCGGCAGCAGCAGCTGGAGGAACTGCAAATAGTCTCACAGGCAGCACAAATGGTCTGTTCCGGCCAATTGGCACTCAGCCACCACCGCAGCAGCAGCAGCAGCAGCAGCCAAGCACTAATCTGCAGTCTAATTCATTTTATGGGAGCACTTCTCTGACTAATAGCTCCCAGAGCAGTTCTTTATTTTCTCACGGACCTGGCCAGCCTGGAAGTACATCTCTTGGCTTTGGAAGCAGTAGCTCTTTGGGTGCTGCTATAGGCTCAGCCCTCAGTGGATTTGGTTCATCAGTTGGCAGTTCTGCAAGTAGTAGTGCCACAAGGAGAGAGTCTCTATCTACTAGCTCTGACTTGTACAAAAGATCTAGTAGCAGCCTAGCACCCATAGGGCAACCATTTTACAATAGTCTGGGATTTTCCTCCTCTCCAAGTCCAATAGGCATGCCTCTGCCAAGCCAAACTCCAGGACATTCACTTACGCCACCGCCATCACTTTCATCACATGGATCCTCATCCAGTTTGCATTTAGGAGGACTGACAAATGGTAGTGGTCGATATATCTCTGCAGCACCTGGAGCAGAAGCAAAATACCGAAGTGCTTCAGGCACTTCCAGTCTATTTAGCTCCAGCAGCCAGCTCTTTCCTCCTTCTCGGCTTCGGTATAATAGGTCTGATATTATGCCTTCTGGCCGAAGTAGATTATTAGAAGATTTCAGAAACAACCGCTTCCCAAACCTTCAACTTAGAGACTTGATTGGACACATAGTTGAGTTTTCTCAAGACCAGCATGGTTCTAGATTCATACAGCAAAAGCTAGAGAGAGCTACTCCAGCTGAGCGACAGATGGTTTTTAATGAAATTCTACAAGCAGCCTATCAATTAATGACAGATGTTTTTGGCAACTATGTCATACAGAAATTTTTTGAGTTTGGGAGTTTGGATCAAAAATTAGCCCTAGCTACTCGTATTCGAGGTCATGTTCTACCCTTAGCATTGCAGATGTATGGCTGCCGTGTTATTCAGAAAGCATTAGAGTCTATTTCATCTGACCAGCAGAGTGAAATGGTAAAGGAGCTCGATGGTCATGTACTCAAATGTGTGAAAGATCAAAATGGAAACCATGTTGTACAAAAGTGTATTGAATGTGTTCAGCCACAGTCACTACAGTTCATCATTGATGCTTTCAAAGGACAAGTATTTGTACTTTCAACTCATCCTTATGGCTGCAGAGTAATCCAGCGCATTCTGGAGCATTGCACTGCAGAGCAGACCTTACCTATCTTAGAAGAACTCCACCAACATACGGAGCAGTTGGTACAGGATCAGTATGGCAATTACGTTATTCAGCATGTACTGGAACATGGTCGACCTGAAGACAAGAGCAAAATTGTTTCTGAAATCCGAGGAAAGGTCTTAGCCTTGAGTCAACACAAATTTGCCAGCAATGTAGTAGAAAAGTGTGTTACTCATGCCTCCCGTGCTGAGAGAGCTTTACTGATTGACGAAGTTTGCTGCCAGAATGATGGTCCTCACAGTGCCTTATACACCATGATGAAGGACCAGTATGCCAATTATGTCGTTCAGAAGATGATTGATATGGCTGAACCTGCTCAGAGAAAGATAATCATGCACAAGATTCGACCTCACATTTCTACTTTACGCAAATATACATATGGGAAGCATATACTGGCCAAGTTGGAAAAATATTATTTGAAAAATAGCCCAGATCTAGGGCCTATTGGAGGACCACCAAATGGAATGCTGTAAAGGAAAAAAAGAAGATAATGTAACCATGTGAGAGGAACGTTTCTTTTGTGAATTATCAAAACACAACTCAACTATGAATCTTCAAATTTTTTTTAAAGCAAAACTATTTATTGACTTTATTCATCCATTTGTAAATTTTTTAAGGTTCTTGTGTATATTTGGGGGTGGGGGTGGTGAATAAATTATATTCAGCCCTGAGTGGAGACCTATCAGATTGAATTGTGGGCAAAGCACAGAATGCCTGTATATGATGTAACTGTATCAAAAAATGCTGTCACATATTTTGTAAATTTTTACCTTGTAAAGTCACAAAAATAGTTTTTAAAGGGAAAAGTACAGTATTCTTTTAATAAACTGGCTTGCAGTCTGGTAGGTCTACGGACCCCACAGCACAACAGGTTTATAGAGATGTATATAAAAATATAGTCCTTATTTTTTTTTTGTCCTTTGTGTGAAGCCTTTTATAACAGATTAACAATCAACTGCATAAATTAGTATTTTAAAAAGAAAGTTAAGTTGTATTTTGGTAATTCACAAACTATCATGCAAATAAAAACTCAGTAAGATAAGAATTAAGTGATTTGAAAGGAAAAGAACTTAAGAGTATTTACAGTGGATATGGTTTTAATACAAATACTGCCCTAAAATGTCTCTGGCAATGTACAGAAGTATTGTATATACTTACATATGTAATTGTTATAAGAGGTAGAAAAAACAGAATCATGGTGACACTTCCATCCAGTTAAGTATGCTAAACGAAAAGTTAAGTTCCATTTTAACTTTTCAGTTTGGTTTGCGATGAGAAAGAGTGGAAATTTGTACATTGTTTTGCTTATAGAATTACAAGGACATGTTGAGAAATTGTTGAGCTTTATTTTGCTTTTTCATAGTAGATTCAGAAAGTAGGAACCTGATAGAGGTGAAAAGGGGCCACTGAAAAGTGAATTTGATAGCTCAACATTTAAGCATGATTACATATTCAGATAGCTTTTTTTGCTTCCTATAAATATATGCATTGTGTGTGTAGTAATAGATGTAAGTTTACACTTTGAAAGCAAATCTTGTTTCAATGTTTATTATAAAAGCCTTGCTAATTTGGTAGTGATGCTTTCTTTGGTTGTACAGGTGTATATTTGTAAACCTCAATGCTGTAAATGGAATTTGTTTTATCTCTTTGGGAAACATTTGCATTTTGGTGTACATTTATGTCCCTGCCCTCTGACCTGGCATATAGTGTTGTATAATGTAAATTGATTTCTCCAAATTGAGAGTGATTTTTTAAAATTTTTTATCTTTATATGGTTTCAGAAGTATGAACCAGCTTTCTTTTTATTATTGTGGAAAACATTTTGTTTTATAACATAGTTGTTGACTCTGTTAATATGGACATGCTAGGATTTGGGTCACTTTCAAGAAGTCAGGGTATTGTGCATAATAGAAAGTATTGGACTGAGATATTTGATGACCATGGAGGCCAATGCTTTTTCCATCTTATTAAATGTGATGTGACTTTTTTTCTTTGTACAGAAGAGTACTGTATTTTTGAATAGCCTACTCCCAAGTAATAGCAAATCTGTATGATAACATTTTTTCTCTGGACATAAGACATAACAGTAACATGATGTACATTTACAAGCGGCCTTATGTACATTTCCCAACAATCTTTTTAAGGCAAAATTGTGACCATATGTGTATAATTAAAATCGTTTTTAATCCTTTGCCTATGAAAATATTTTGGAAAAAACTTGCTTTGTATATTCAGTTTCTGAAAGATAAAGAAAGTGCTTTGTATTTTGTTGAAGTCAGTATTTTGTATAAAACTTTTATGTTGACCCACTTATGTTTAGTGCTAAAAACTAATGAACTATGCTATCTCTTTCAATTGAATATGTAAGGGATTTTTTTTATTGGAAGCCTGCAGAAGAATACCAGTCTTCTGAGCACAATAGTGAACATAAAGGTTTTTCACATAGCTGTTCATATCATGAACCTAAGAATAACAGCATGAAGTTTGGGGTGCCAGGCATAGTTTTTCATGTTTGATGTTGAGTTATTCTAGTTTTCTAACCCAACATTCCTTGTTGAGGCCATTAAATTTAACCACTTGTTCACTGTCCCTTCTCACAGTCACACTTGTTCATCAGCATGTCCCAGCCATAGTGACAGAGCTTTTTTCCCCTCCATACAGGGCTGCTCCCTGCCGCCCTTCCCGTTTTGTTTTGCCAGCCTCAGAATGTCTTGGCCCTGGGCTGAACTTTTGTTCCCAGTATCAGCTCATGGTTTCAGGATCAAAGTTGTCCTTGTTGGAGATTGGTGGTGACTTTCCTGGATTTGCACAGTTAAATTCCTGGTTTTCCTTTATCTTCTGTTCACACAGGCAAATTATTTCTGCAGATTTAGCAAGTCCTAGAGAACAGCACATTGGGAAACTGGACCATTGTCTTGGATTCCTGATGTTCTTGTGTGTCTCATTAACAGCCCAGTCTTCCCAGTATTTTAGGGCTTATCATAGAAAAATATCTATTACTCTAGAAATTTTGGTCTGCCATTTTTGATGCCCACCTCTCTGATTCCACCTTTTAATAAATTGGCATGAGGTTTTGGTATAATCTGAAAATGACATTTTAGAATAAACTTAATTGGGCAGAACCACTTAGGCTTTACTCTTGGTTGTCTTTTGATATGAATTGTTTCTGGACCAGTTTGTCTAAGTCCTGGCTCTTATTGGTTCATATGAAATAATGTTATCTTCACTTCTTTGTATATTATGTATAAATTAGAAAATGAAAAATGTGTGAATAACATTGTATGAAATAAATCTGGTCTTGTGTTTTTCTCTACATAAAATACCCCACTGTACCTCAATTACAATTCCCATTGACCATTCAAGTTTACTCTGATTTAAGGAAAACGAAAATACCTTTATCACATGGATGCTAGTCTGGGGCCAGTGATTGCACTGATGGTATGAATCCTGTCTTAAAATATTCATAATTTCTGTCTAACTACATAGAGTCATTACACACTTCATATGATGAAACTTTAACCCTGTTTCTTTATTGATAAAATGATACTTCAAAGTTGTTTTTGAGGATTAAATTAAATCACATATCTTTAC EMBV3_03351 GCCAAGAGACATGTGAAATCTTAGCTCCCTAAACAGGGATCAGACCTGCCCCCCTTGGAT Gene GeneID:515895|C27H8orf40:NM_001098040:68_cdna UTR3_Alt 1 NULL GeneID:515895 27 GENE C27H8orf40 C8orf40 chromosome 8 open reading frame 40 ortholog EMBV3_07111 CATCCGAGAGGGTCACAGGTTTAGGGGCTACAGTATAGACAGAGGACAGAGTGGGATAAA Gene BVV0102_216967 - 1 EMBV3_25487 GK000029.2:45947884-45957174 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21706 TCCTGTGCTTGGCTTCGGTGATCTGGGAGAAACACACTTGTGCCTAACTGGGTGCTCTGT Gene GeneID:506198|GOSR2:NM_001098885:209_cdna Constitutive 2 NULL GeneID:506198 19 GENE GOSR2 MGC148480 golgi SNAP receptor complex member 2 EMBV3_40268 AAGCCCAGAGCCTCACTCTGAACACACACCCTTTCCTTGAGGGACACGTGGAGCCACTGA Gene BVT0101_029865 - 1 EMBV3_27813 GK000009.2:103477814-103520045 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33023 CAAATGTAAGGATGCTGTTTAGGGGAAAAGTGAGTCGTAAACCTGTAGTTTGGACCCAAC Gene BVV0102_296567 + 0 NULL GK000002.2:29994584-30088133 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29906 CCCACATTGAATACGAAGCACCACCAGATGGCCACCAAAATGACAAGAGCAACAGCAACC Gene GeneID:540719|KPNA3:XM_002691738:229_cdna Constitutive 0 NULL GeneID:540719 12 GENE KPNA3 NULL karyopherin alpha 3 (importin alpha 4) EMBV3_26543 TGACATACACTTGGTGGGGCCCTGATAAATGTGAGCTGAGAGAGAGGACAACATGCATTG Gene BVT0102_002501 + 0 NULL GK000001.2:78758432-79041609 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004124 TCONS_00004127 TCONS_00004125 TCONS_00004123 TCONS_00004126 1 XLOC_000974 Coding TCONS_00004123 XLOC_000974 Coding Coding LPP 1:79025392-79725431 j TSS2067 18548 1 TCONS_00004123_5 614 0.0975307310761268 13 0.973522865901565 6.99509208823805e-06 3.13733236280125e-08 1.74748766504405e-05 4.052289636147e-13 6.30774441116602e-06 3.14307319797411e-07 4.75901899955594e-06 3.29925877157328e-06 4.19870936813839e-06 1.25306787272709e-05 4.20339290342732e-08 1.86512853735127e-06 1.16337022228585e-06 2.86192483580389e-06 1.38349130743823e-05 0.00440429279714673 0.00455226666746252 0.0051956742690139 7.66203950193638e-10 9.80707717622366e-10 7.12877457197908e-21 0.000660816350468127 2.61324998220672e-05 0.000516040688901344 6.52710535826184e-70 5.14445948119966e-13 2.31136328867498e-05 4.97266655821422e-06 0.000168703813139668 0.000318448241823276 XM_005201494.1 LPP PREDICTED: Bos taurus LIM domain containing preferred translocation partner in lipoma (LPP), transcript variant X1, mRNA. 0.0 1.002e+04 100.00 0.299493206814751 NM_001167671.1 LPP Homo sapiens LIM domain containing preferred translocation partner in lipoma (LPP), transcript variant 2, mRNA. 0.0 4634 80.02 0.277226655164977 TCONS_00004123_5 sp|Q93052|LPP_HUMAN LPP_HUMAN Lipoma-preferred partner; 0.0 1141 92.83 0.998371335504886 1 coding 0 0 0 0 0.0126006094365261 0.908648261727076 -0.002078802534003 0.964276782940164 GGGACCACCTCCTTGCAGTGGGACTCAGGGTGTGTGAGACAGAGTGAGTGCCAGTGGAGGGCCGGCTGCCTGTGGGGCCTGACGGCGCGTGAGATCATTGCGGAAACAGAACGGAGGACGGAATCCAGTCACCTGATTCCAGTTCAGTGCTTTTGCTGTTGCTCTACAGGGTATTTGTCGGAGGGAAGATATTTTTCCTCAGCTGACACTAGCATTGCAGTTTGCTGACCCTTGTGTCCACTGATCATTCCAAGAACGAGCTGTCCAAGATTCAACAATGTCTCACCCATCTTGGCTGCCACCAAAAAGCACTGCTGAGCCTCTTGGCCATGTGTCTGCACGGATGGAGACCACCCATTCCTTTGGGACCCCCAGCATTTCAGTGTCCACACAGCAACCACCCAAGAAGTTTGCCCCAGTCGTTGCGCCAAAGCCCAAGTACAACCCATACAAGCAACCTGGTGGTGAAGGTGATTTTCTTCCACCCCCACCTCCACCTCTCGATGATTCCAGTGCTCTTCCATCAGGCTCCGGAAACTTCCCTCCTCCCCCGCCCCTTGATGACAATGCTTTCAGGGGACAGGGAAATCCTGGAGGCAAGACCCTTGAGGAGAGACGCTCCAGCCTGGATGCTGAGATTGACTCACTGACTAGCATCTTGGCTGACCTGGAGTGCAGCTCCCCCTACAAGCCTCGGCCCCCGCAGGGTACTACTAGTTCAACAGCTTCTCCTCCAGTCTCCACCCCTGTCACAGGACATAAGAGAATGGTCATACCAAACCAACCCCCTCTGACAGCAACTAAGAAGTCTACAATGAAGCCACAGCCTGCACCCCAGGCTGGACCAATCCCTGTGGCACCAATTGGAACACTAAAACCCCAGCCTCAGCCTGTCCCAGCTTCTTACACTACAGCATCCACGCCTTCAAGACCTACCTTCAATGTGCAGGTGAAGTCAGCCCAGCCCAGCTCTCATTACATGGCTGCTCCTTCACCAGGACAATTTTATGGTTCAGGGCCAGGGGCCCAAGGTTATAACACTCAACCAGTTCCTATGTCTGGCCAGGGTCCACCTCCTTCTACACGGGGAGGCATGGATTATGCATATGTTCCACCACCAGGACTTCAGCCTGAGCCTGGGTATGGGTATGCTCCCAACCAAGGACGCTATTATGAACCCTATTGCGCAGTGGGGCCTGGCTATGGGGGCAAAAATGACTCTGATCCTTCCTATGGTCAACAAGGCCATCCAAATACCTGGAAACGGGAACAAGGGTATACTCCTTCTGGCCCTGGGAACCAGAACCCTGCTGGGATGTATCCAGTTGCTGGTCCCAAGAAGACCTATATCACAGATCCTGTTCCAGCGCCCTGTGTACCACCACTGCAACCAAAGGGTGGACCAGCAGGGTCCATGGGACCTCCAGCTGCACCCTCCTCATTCCGCCCTGAAGATGAGCTCGAGCACCTGACCAAGAAGATGCTGTATGACATGGAAAATCCACCCACCGATGAATACTTTGGCCGCTGTGCTCGCTGTGGGGAAAACGTAGTTGGGGAAGGGACAGGATGCACTGCCATGGATCAGGTCTTCCACGTGGATTGTTTTACCTGCATCATCTGTAACAACAAGCTCCGAGGGCAGCCCTTCTACGCGGTGGAGAAGAAAGCCTACTGCGAGCCCTGCTACATCAATACCCTGGAGCAATGCAGCGTTTGCTCCAAGCCCATCATGGAGCGGATTCTCCGAGCCACAGGGAAGGCTTATCATCCTCACTGCTTTACCTGTGTGATGTGCCACCGCAGCCTGGATGGGATCCCATTCACCGTGGATGCTGGTGGCCTCATCCACTGCATTGAGGACTTCCACAAGAAATTTGCTCCCCGCTGTTCTGTGTGCAAGGAGCCTATCATGCCTGCCCCTGGCCAGGAGGAGACTGTCCGGATTGTGGCTCTGGATCGTGATTTCCATGTTCACTGCTACCGGTGTGAGGATTGTGGTGGTCTCCTGTCTGAAGGAGATAACCAAGGCTGCTACCCGCTAGATGGACACATCCTCTGCAAGACCTGCAACTCTGCCCGCATCAGGGTGTTGACCGCCAAGGCCAGCACTGACCTTTAAATCCAGTCGCCTGTTTAGCGGTTAGTTGGTGGATCCGAGAAGGATGAAACACAAGAAAAATATGACAAGAGAAATAGGAAAAGAAAGGAAAGGCAATCAAGCTATGGGATGGTCTCTACTTCATCCACTATTAACCTTTCTGTAGAAACACCTAGAATATGAGATTTTTTTTTTAAGTTCTTACAATACACATTTCACAGTTAGTCATGTAGAACCTTGATAGGCCTTTGTTCCCAAGGACTTGCACATTTTTGCACGGATTATGCTCCATCCCATTCACTTCTGCATTCCTTTAACTTTTAATCCCTATGTTTGTCTCACTTTTCATCTGGTTGAATGGCTTTTTTTAGTGTGGTATTTGCTGTCACACAGTTTTTCCTGGGGAAGTCTGCCAACTCCCAGGTGCTTTTCGGCTTGAAGGCTCCATCCTATCACTTCCACACTGCCAGCGATCATAAAAGATAGTCATTCATTTTCTGTGTATTGAAAAAAATTGTCTTTTATTGCTCTAAACTAGTCATGTCCCTTGGGGAGAAAATGCACAATTTTATGTCAGGTTATAAAGAATTTAAACTGTAAATTACGTAGATTAAAAGAAGCTGAATTTGCAGCCATCCCAATTCAAAATCTATAATGACCAGTGGTGGGACTCATTTGAAAATAGATATTGGTGAGAGAGAACCAAACTTCAATATTTTTTCTGCAGAAATTACAGATGGGGTATGCTGGAAAAAGCATTTTGGGGTTACATTTGAAAAGGCATTATTATGCCTCAAATATTAAAATTTTATTTTCCATGCTACCTGGATATAATAATATGGACAGACTTGGTTTTCTCTAGAATATAACTTCCAATACTGCTCCACTTTTCATATCGGATATGTTGTGACATTTTGTTTGTTTGTTTGGGGAGGGAGGACATACAAACACAACCACCAGAATGTGTAGCTGTGTTCCTCTAGAGGAAGATCTCTATAGACAACTGTTCGTTTTTTTGTTTTTTTTTTTCCAGGCCTAGGTCCATTTTACCTGACAATTGCAAATCGGGGCACATAAAATTGTCTTGGTTTTGTTTAGTTTACCTTAAAAAGACAGGAAACTTGAAAAGGTTGTGAAACCACAGTTTCATCATTCTTATAATTCTTCTGCAACTCAAAATACATATTGCAGGAGACATTTTCATATCACTGATGTGACATTTACACCACACTTTCATAGACAATCACTGAAAAGAAATTGCCTTTTTGAAGTAAAAATATGCAGAGTCTAGAATCTTTAGTCAGATTCTTTTGAGGCAATGAAATGCTTGCCTGCTAACTGCAGAACCACATACATTTTTTTTTTTTTTTAATGTTCTAACACGTTTCCTTTAAGGAAGGACCCTTCTCTTAATAGCAGGTTACCATCTTGTAAACAAAGTATTTTGGATTAAGATTTGTTCAAATCTTTTTTAAGATTAGGTCAACCTTTTTAAAAACTTTCTGCAAGTATATACTTTTAAAGTACAAAGTATTTTAAATATAACAAAAATATAGATAATAATATAATGGATCTCTGTGATACCCAGTTTAAGAAATCAAATATAACAAATATAGCTACATTCCCCCGTATACCCTTCCTTGATTCCACAAAGATCTTTTTCATGATTAGAAAGTGATAAACTTTTCTAGTCTGACTTTGTTTTTTAATTTTAACACTCAGAAATGAAAAATTATTTGTGAATGTTTTGCATTGCAATCCAGACCTCAAGCATCCCAATTACATTTATTTTACTTTAGTAGGAATAATCATAAAGGTGGTTCATTTTTTTTTTTTCCCAATAAGATATCCTTAAGCCTATGGCTCTTGTAAGTCAATCTGTGGCTCATTTGCTTTGGTTACCAGTTTTGTTTTAGAACGACCACAGCTAGAGCTTTTCAAAGGGTCCTTTGACCACTGTGCTTTCCTTACCTTGATTCCCTTGTCCTTGACCTCACATTTCTCATAATGTGAGATACAAGAGGTCTACTTTGGGCAGCATGTGGATTTTAGGATACAATGGCAACTGTATCACTGAATTTCTGTCTTCCAAATGAAAGGAGAGACCATGCTGATGACCTCAAAGAGTACTGACCATTAGACAATTGGGGTGATACTATCTATAATCAGCTTGAATTGCTTCAGCAATTTGTTTTTTATGAAATACTTGGGGAAAAAATATATCTTTTGGTCAAAAGGAAAGAGCCCAATTTATTGAGGGGTGGAGTTTATCTCTTAAAATACAGTCTTATGAATTTTGCCAAAAGAGGGAGGATTTATGAAATATTTATACTATAAAAATGCAGTAACATTCTACTTGTTGGTTACAAGTTGGTTTAAGTTCTTATGTAACTGAATGTTTACATGCCAAGAAAAAAGAGAGTTATAAGAAAAGGCTGTTACAGGCCCCTCACTGTGACACTGCCAGAATAGTGCTTGCTTACAATCTTTATAGTGCGTTTTTATCACGTAACCTCAGAGTATCTTTACCAAAGATTTTTAAAGTAAATCTCTTTTTAATATAGACTTATCATACTTTTATAATAATGAATGTGCACACCTACATATACAGAATATTTAGATTTAGATTTTTTTCTTTCACAAGGTATAAGGAAAGGATCCTAAAATATTTTATTTCAGGATTTCTTAATTATATGATTTATATTGCTTTCTTGTCTTCTATTAATCATTTGGTATCAGCAATGCCAAATCACTCTTTACTGTTTTAGCTACATGAAATGATGCCTATAACAGATATAAAGATCTAGTGCCTTAAGGATTATAATTCTACTGTCTTATGATATGTTGTCTTGATTGTTATCATTTAAAGACATAGATAATAGAAAAAATCATAGAGTCTATAAGAGAAAGCTTGTAAAAATATACTAAAAAATATACTGGTTTTTAAAAAAATTGTCACAAACAGAAATATTTGGCAATTCCATGTAACATGAGAGACATGGAAAAGGAGAAAAAACCCACTATGTCCTGGGCTCTGCAGATTGTTTTATAGTCAGGTTTCTCCACCACCTGGATCCCCAGCTCAGACTGACTCAGTATGGAGTCTCATCTGTGAACAGATTGGCCTTTAAAACTCAAAATAAGTCATATGTTCCAGCTAAATGCATCAAAGCTTTGAGATCCTGGACGTCTCTGCAGCCCAATGATGTGGGTTCTTTTTCCTTTCATTAAAAAATTGTTTTTACCAGAGCAACTTCTCTGATCAAAATGACTTCGTTGTGTGTATGCTGATGAATACAGAGGAGATATAAACACTATAACTGTTTCCTCACTATCTAAGATTCTGCAGAGATGTTTGTGATGATGTTTCAAGTATATAATATTCTAATTGCATTTAAACAAGTATTTTGTATTTGGGTTCAGGGGAAGGAAGAGAGCATTTTACCATGGGGCTGTCGTAGAGGGTTTATGGAATATAGACAGGACTCTGAAAACACAACTCCCAACAGTTTTCCTAGTTAATAAAAATCCTATTAATGTGAACCAGCCAGGAATAACAGTGTTATTTCTATTTGATATGGTTTAGGCTTCTCTTGTCAAATCTGCATTGGGGCTGCCCCTTGATCCCTCCATTATCAAGTTTTGAAGGGTGTTGGGGAAACCATGGCAGCTGCTAGGAAGATCAGGGAAACACTGATGTAACCTCACAGCCTCTCACCATTTCTCTTGGCTTGGAAAGGCTTTTTTTTCCATATACATTTCTAGAAATATTGCTATGCTACCTTAGTATTTCACATTTGTAGTTTAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTTCAGTACATGTGTGTTATGAATGAAATATGACAGCATGTTCCATACCCTGCTTTAGCCATCTGTAGGAAACCAGGAGGCTGGAAAAGATATACCTCTGCAAAATGTGCCTCAAGTTCATTTCCTAAGATCGCTCTTTTGGTGCACTTTCACGGGAGACAATCAGAGAGCAACATGCATTTGTGCCTTATTTTTAAAGAAAACTTTACACTACTATGAATGCTCCTCTGAAGAGTCTTCACATAAATAACCCTCCCAAATCTCAAAAATGTACTCATTGAAAAGTCAAAATCCAGAGATGTCTGAACTCTTCATCTTAATGTATTCTAGCAGTATTTCTGTTCTCGCCATCTCTTGGGAAGTACCTTATGGTACTAAATTAGGAAAACATTTTTAAGCATTCTTATGCCACAGGTGATGTCTTAGGTGTTGTTAGTGAGTAAGTGGTCTTATTTAGTGGTCTTACTCTAGTTTTAGTCAGCAATGAAGACGTACTTCCACTTGATCTATTCAGCATACCGCTTTAATTGCCACAGTCTTTTGGTTTGCTGTTTTTTATTTTTTTTAATTTTAATAGTATACAGAACCAGTTGAGGATCTTGGTTCTGAGTCATTATTATGGTGCAATCATGAATATATCAGGTCAAGTCATTTCCTTGTCAGGTAACTTTTCTCACAAGGCTGTTATTTGCTGCATGCTGTGTTCAGTTGCTCAGTCGTGCCCAACTCTTCGTGCCCCCGTGGACTGTAGTCTTCTAGGCTCTTCTCTCCGTGGAATTTTCCAAGCAAGAATACTAAAGTGGATTGCCATTTCCTCCTCCTCCTTCCTGACCCAGGGATCGGACTGGTATCTCTCATGTCTCTCCTGCATCGGCAGGTGGATTCTTTACCACTCTGCTGCCTGGGAAGCCTGGCTGTTGTTTAGTTTGCTTATTGTTTCAGCCTTTAAAAAGTGATCTGATTAAAGCTGTGTGACCTGGTGAGAGTTCTCTCTCCCTCCCCCTCTCCCCCTCCCTCCTTGTCTCCTTCTTATTCCTTAACATTTCTACTCATTAGTGTTATCCTGATTGGACTTTTCATAAATAAATTAAATCAGTACATTACAATCCTTATGGAATTATGATCATATTAGGAGAAGAATTGTACCGCAAAATATATGCAGCATCCATAAATCCTTTCTTTAGAAAGGCATATTTTTCCAAACTGTGTTTATTCATAAAGTGAGGTGAGATAATAGAGTCTTTGGGTTTTATTTTAATGAGTTTTCATCAGGGATTCAGATCACAGAGTTCTTGGCAAATTCATTCATGACTGGCCTACTTTTCTCAGCTATAGGCAAAGTGATCTTTCTAAGACTAGCTTAAGGTTTTTTGTTTTTTTTTTTTTAATCCTAAGCATTTTGACCAACAAGACAATCGTGTTCTTAAGTGATGGCATGTTATTTTAGATCAATGAAACTTGAGAATTTTCCATATTATCCTTCTGGAATTTTTACACGTATCAGCATTTTTTCCCATGACAATCATATTAAACCCTAATACTTCAGGCACGGTATTTTACAGGGAATAGATCAGCAATAGTTTTTCCTGAAGCACATGTTACAGACTTGTAGTCTTATAAAAACTAACCTGAAAAGGATCTGGATTTCTCAGTAACGCATTTTCTTAAAATTTGAGTCTGAGATTCTTTTGAACTCTGGCTAATACTGATCAAAAACATGCCCTCTGTGTCTGTTTTTTATAAATTTGTTTGGAAAAAGCTTATAATTCTAGGAATGGATTTCCATTGTTGATTTTTGTCCTTAATGTTGTCTACAAGTTGACCTTGATTTTCCTTTTTGGGAAGGTCACATATGAGAAAGGTAAAAGCATATCTAATATATACAATCAATACACAAATGAACTTACCCAGTTTTAATAATAGTCACAGTGAATATATTGTTTTGATAAATAGGTTTTTCTGCTTGTTTGTTTTGTTTTGTTTTTTAACCGGTCTCCAAGAAGAGAGGAATACGGAGGGAAGGAAGAATTTGAGAGAAGGGGAAGGTCACAATTAAAACACTGACATGAGGATTCTTATAGAATGTAACTCAGAATTTTCACAGAGGTTTTAAGGATTGGCAGTTGTAGCTTTTTAAACAAATAAAATATATTTCTAAGTTTATGAAGTGTTTAAAAATCACTGTGGCTAACACTGTATTTTTTCCTTGTCAGAAGAGAATTAAAAGGAGAGCTCTTTCTCTGTGGCATGGCCATCACCACACAAGACTCTGTAATATATTCACTTCATCCCTTTGCAAGAGGGCCATAGCTCACTCTCCTGTGACAGATGGCGATGCCTATTCTTACATAGTCTTAAGCAAGCTCCAGTACACCCTAAGCATCTCTAAAGGTTAGAGGTTTCTGTTTTCACACACTGAGTATCTCATCCTTTCCAATGTAGGTACCTGGTGAGCATAGTAAACAGGAGTTGCCTTGGTCTGTGGATCTCTTGTTCAAATCCAGTCATGCGCTTTCTATAATGCCCTGCCTACACAGCTATACTGGAATTGATTTGTACCTTTTCTCCTTTTTAGTTGCAAGCACAGAAAACTAACATTAGATTACTAAGTTCAAAGAAGAATAAATATAAAATGGCGTATTTTCCTATCAGTATAGAAAGGAAGGACCCTTACTCCTTTCTCTATTTTACTTTCCTGGCCCCTGTGCAAAAAAAGTTGTAGACACTATTTGTGTTATCCAACATACATGTGGCTTATTTTGTGGAAAGTTGTGTGGAAGATGCATTTTATTAAACTCATTGACTTTTCTCCTATGAAGTTACAAAAACGAAATTGCTAAAATCTTTTTTCTTTATTTCTGATTGTTGCATAATTTACAACAGTTTCTAACTACCCTAATAAACCTCTCTCATTCTAACCCTTATTATAAGCACAAGTTTTGTAACATTCTATAAGCAAAAGTTAGATATACTAGAAAGAAGAGGGAAACCCATAACTGCGTCTTTTGTAATACTTTAAGATGGTTGCATTAATCCTTACCCACTATGTGCTTGCTACTTTTTTCAATAAACTAATTCACTTAATGGGCAAGTGGAAACATCATTCACCTTCCTTTGCTAAACATTGACCTAATAAACCCAAACAGAAGTCTTATTAAATGACACACACAACTACACAGAACTGTAGCTTCTAAATTCAGTTTTCAGCCCCAAGAGTAGAATGATCTACCAAGATTAACACTGATTTCACTGTGTCATCTTCTGTTCTACACCAGCGTAGAAGGCTATAGCCAACCCCAAGCCTCAGCACTGTTCCTAGACAAACATAGGCTCATGGGTCTTTTAAGGACCTGAATCTCCTATTATTTTCCCAACAAGTCACCATTCCACATCTTTTCAGAGCTCGCTAGTTTGTAGTACTATTCATGGCAGTCCTTCTACTATTGGGGCAGCTTTTTTCTACCAAAGTTCTTCCTCATGTTAAACAAAATTCGGCCTCTGGAGCTATGCACAGGAAGTCTAAGGTCTATATCTTTGCCTCTAGGTCAGATACCACTCTTTCAACTTTTCCTCATTTATCAACATAGTATCAAGTTCAATCATCCATTTGCTTCTCCTTCGAGCAGTTAGACCCAACAATATTTTCTAATTTTATTTCAGTCTACTAAGTGAAATGTAGCCAGCTCTTTGGGTCAGGCTAGGTAAAAACACCCTGTCGGACACGACTGAGTGACTTCACTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGGCAACCCATTCCATTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGGCTGGTAGGTTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGGGACTTAGCAGCAGCAGCAGCAGGATTGAAAGTAAATGAAATTGGAATCGTTGAAAGGAAACTGATATTCAATGTGGAAATTTCCCCCAAGGACTCAGACCCAGGAGAGTGAAAACTGGATGAGGTTAGATCTCGCTTGTGTGTAAAACAGTCCTCTTACTCTGTGTACTTCACTGTTTTTGATGTTACCAAAGTCAACATAGGGTTCAGTTCAGTTCAGTCGCTCAGTCATGTCCGACTGTTTGGACCCCATGAACCGTAGCATGCCAGGCCTCCCTGTCCATCACCGACTCCCGGAATCCACCCAAACCCATGTCCATTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTGCCCTCAACCTTTCCCAGCACCAGGGTCTTTTCAAATGAGTCAGCTCTTCGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAGTGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAATACCACAGTTCAAAAGCATCAGTTCTTCCACACTCAGCTTTCTTTATACTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTAACTAGATGGACCTTTGTTGACAAAGTAATATCTCTGCTTTTCAATATGCTGTCTAAGTTGGTCATAACTTTCCTTCCAAGGAGTAAGCATCTTTTAATTTCATGGCTGCAATCACCATCTGCAGCAGTCTTGGAGCCCAGAAAAATAAAAGTCAGCCACTGTTTCCACTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACCGGATGCCACGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTCTTTAGTTCTTCTTCTCTTTTTGCCATAAGGGTGGTGTCATCTGCATCTGAGGTTATTGATATTTCTCCCTGCAATCTTGATTCCAGCTTGTGCTTCCTCCAGCCCAGCGTTTCTCATGATGTACTCTGCATATACGTTAAATAAGTAGGGTGACAATATACAGGCTTGACGTACTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTAACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGGTATTCCCCTCTCTTTCAGAATTACATAGGGAGTGGGCTAGTATTTACATATGTCATCCATTAGATTCCCACTTCTTGGTCCATGTTCAACCCTTTCACTTTGTCCTTGTCTTCTCAAGAATGAAACATTTCTTGTCCGTGTTCCTATACTGAATATGCAAAAAGAGTTCTGGACTCTTTATAGGTTCCACATAAATATTTCTGGCTAGTTTGGTTTTTGAGATTTGCTTGCATTTTTCTGGGCTCAAATGTTAGTACCTAGAGTTGTTACACTCTTGATGAAGTGAGCAGCTTCACCACTCAATCATTTAAGAACTACCCTGAAGAGTCCATGTTTTCTCTATACTTTTGTCTTCCTAACAAATTCATCTCTTGCTCATACCCTCCATTTAATAATCGCTTTAAGAGAATCAGCCCCTAAGTAACTTTGATTAAAGTCAACTGCAATAAAATCAGATAGGTTCAGTCTGCACTCCATAGGAAGTGATAATAGCTTCAGGAAAAGTAATTCTTCCCAGTGACATCAGTTAAATCTTCATGGAAGAGTGAACTTAAAAATCTTGATTCACTGGTTTGATTTAGAAGTTTAGAGAAGACTGTGTAAAGCACCAGAAACAAAAGGAAAGCATAGGTTATTTTCAGAGAAGATCCTCCACTTTAAGTATAGCTCATTCTAGAATGTCCTTCACAGAAGAAAAGGTTTCCAGATATTCAGGGTCAGTGAGAAGGGAAAGACATAGAGCAAGATTGATTCCGTTTGCTTTTTCATCTCTGTGTAATTTTAAGATAGGAAAAGTTGTCAAAATATAATCCAGCTCAGACAGTATGAATAGGAATCTTTTTTGGTAATGTACAAAATGTACATTTTCATTGGTTCTTAGCTACATAATCTACTCTTTCACCAAGCACCCCTATCTTCTGAGCCTCTACAGTATGACAAGCAGGACACCGTATTTTCCTGTTGCTTCTAGGTCCATGATTGTAAAGGACTCCACATTTGTCTATTCCACTTGGTGTTAAAATTCCCTCATGTATGTACTGATAAGTGAAAATCCAGGCTCTGCTTGAGCATCCCCTGCATCAGGGAGCTCTTATTTCTTAAGTTCTTCCACTCCCTCCATTGTACTTGGTTCCAAGCTCCCAGAACCAGTCTTTGGGGCTTACGTGCTCCTTGGTGCCACACAAAATTAATCTCAGTACATAATAAAACATTGCTTCCTCCCTGTTTTCCTTCCTAACCTATTTTGCTTTTGGCAACACATTTCTTTAAAAAATAAACTGTGGTTTTTTGGGGGATCTTTTTTTGGTTTTTTTTAGCTGAAGATTATTAAAAAAAGCTTTAAATATCCTTAAAAATAGTCTGAAGGTTTTTCTGAGGGTCAGGTTTAAGAGTATGAGTTTTGGGTTGCAGTTCTTACTTTCTTATTCAAAAGAAAAACTATCCTGACAGTTGTTACACAGCTTCATGCCTTCCCCCACTAACTAATCCGTGAAACACTCTCCCGTTATCCAGGCTGTTGATAATGACCTTAAAATGCTGGGAAATGTCAGCGTGTGATTTCCACTTCTAACAAGGAAAATGTCAAAAGCAGAAGATGCTGGTTCTGTTGAAAAGCATTACCTCTAGCCAGTTGTTCTGTGTGAAAGGAAGTAGGTTACATTATGTTGCAGTTTTATATCGAAATTTATACACAAGTTCAGTACAGTTGAAACATGGCGTTAATTACAGTTTATGCCACATGTCTCAAAATCCTAAATTCAAAACTTCAAAAGTTATTTAGAAGATGTTGGCTAAATCCATACAGAGTGCTTGTTCCAAAGACATTTGTAACCAAAGATAGATGGGAAGTAGAAAGACAGCCAGAACACTATACCAGGCACTCGCCATATATTAGTGGTCTCTGGGACGATAAGACTTGCAGGTTCTTCCACCCCAGCCTTGACTCCAAGAGCCCTATTGGCAGAAGCTGTCATCAGTCTCCTGGGCAGGGGGCTTTCCAAGCTCTAAAATAATAATTCCTAAGATAGTTTACAAACTGCTTTCGCACATGAAACAGCTCTGGGAGGAAGGTTATTAATAGCCCTATCCTGAAAGAGAAAGCCAAGGCTCAGAATGGTTAAGTGACTTGCCAAAAGCAATAAGAGCTGGTAAGTGGCAGACCTGGGGACGTACCCAGGTCTGGCAAGTCCAGTGTTCTCTCCAGTGGCTGCTTTCAGGGCACCACATACCTCAGAGCATGCTGGATGCCTCTTACAGACCCCCGGGGCCCCTGTTTGAAGGCATCCAAGAAATTCACACCGATCACCCAGCTATCAGGTGGCAGAGGCATATGGGCGCTGTGGGGTTTGAGACCGTTCAAAGCGTGCGTGCATTTTCTGTGTCTTCTCGTGGGAGACTGCTCGGCAGTCTGTCTGATTGGCAGTGTGACGGAGCCAGTGAGGAAGGGCACCGCGAAGAGCAAACACTGGCACTGAAGCACACTGCAGCAGATTTCCCCGGAGACTCCGGTTTACTTTACATTAACTGAAAACCTCTCTGGAACTGTGAGGTTCCGAATATCAACGGAGGCCACGCATTTAGAATTCAGTGGCGACACACAGAAGTGAGTTGATCCTTAAGACATTTTTCTCTTATGTGGGCTTTGATTTATGCCCCACAGAGGCAGGAACTTCTGCAGGTAAACAATGCATGTTGTCCTCTCTCTCAGCTCACATTTATCAGGGCCCCACCAAGTGTATGTCATAGCATCAGGCCGAGCCAACCAAGTGACCTTGACCTTGAAGTGTCTGTGAAAAAGTGCTATGGGATGGATCGTGATTCTGCCACTTGCCTTTTGCTGTTTGAGAGCCTGGGCTTCCCTTCCTGTTGTCATTTTGTGTTTCCTGTGGGCTTATCATGGGGAGTTTGGTACTGTTGTTTCCAGAATGCTTACTTGGAAGCCAGCCTGTATGTTCTAGAACATGAAATGTGGCGGTTCAACACCTGGGTATGCCTCCACTTGAGCAGCATCTGTCTGGAAACAGTGCCTTTTGATGTGTCCTCTTGGGTTTTCAGTTCCTCTCATTTCTAATTGTAGTTGTTTGACTTGAAGTTAAAATCTGTTAACTGAAAAATATTCTTTCTTCATCTGAGTTAAATCTACTGCAGGGAACCTTAAAATGAGCTTACCTAATATGCTTTCTAGGCATCTTCTTTCCCAGGAGGCTTCCATCCATCAAATCGGTCTCATTATCCTTCTGCTAAATTCTCTGGGATTAATGAGGGCCGAGTTAAATAACAAGTGGCTTCTCACCCCTTTCCAGTCTGCACACCTGGGAAATACAGGTGGTGCCAGGGGGCAGCAGCTGAATGGCTTTGGCTGAGATGACATTCAGACACCGGGAAGGAGCCTCATTTTCCAGTGAGGTTTGATTAATGTTATGATTGATGGAGTGGAAAATGATTCTTGTAAAATCAATGATGTACCCCGCCCCCCCCCCCACACACACACAGGAGTGGATTAGCAGAAGAAGCACTTTGAGAACTCTTCAGAATTTTCTAGGTAGGTATGCCTGAGCTGAGACTCACTTGGGTGGAACCTGTGATGTCTTAGACAAGGAATAAAAGGACAGTGAAGTTTTGAATATGAAAAAGCAGCTCATTAAAAAAAAATAAAGACAGCCATAAACTCCAGTTTATCTTTACGTAATATAAAGGAAATTATGAATGCATTTTTTTCTTCCTCCATTGTACACAATGTTACCCCTCATAACTAGGAAAAATACAATTGTGTTGTCTTCAGAACACTCACCCGTGCATCTGCATGCACACATGCTCACACACTCACACACACTATCTCATACACACACACACATCTTCCAAGAAAGCTGATGCCTCAAAAAGGAAATCTTATTTTAAAACACTTGGATTTTTCAGGCCAAGAAACTAATAATTCCTAGACCTGACCCAATTTTGTGACTGCCAAAAAAGAAAAGAAAAAGCTATTTAAATTTTGTACGGATCCATTTATCTTTTAGAGTATGCCAAAGCAATTTGAGGTGGGGGTGGAAACTAAGGTATTTATCTCTGCAGCTGGAGTCTCTATGTATCTATCTGCTGGGAGTCCGATAAGAACAATTCTTGGGTGATTATTATTGATACATTGTGTTGCCGCTTTCTCCAGTGCCTGCTTTCCTTCCTACTCTTGTTTAAGAATAAGAGTTGCTTTTTTAACTCCTTGTCCTCCATCATGAAGGAGTAAATATTAAGCCTAAAGACTTCCCTCACCAAATCATTTCACTCCATTTCTGAACTAATTTAGAAAGTGCAAAAGAGGGAGAGCTAGCTTTTCTTGGATACATTTTCTCTTTTTCTTCTTTCTCAGGAGACAAATATAAAGGGAAAAAATCCAGTTCCTTTTCATCTCTTTGGGTGACAGTTGATGATCCCTTAGTAATTATAAACTAGAAGTAGGAGAATAGCATGGCCAGGTTATGATGTATCTGCCAACATGTTTCATTCCTTCAAATTCAGACTTTGAGAGGAAACGGGATTTTATCATTTAAATGCAAACAATGGGAATGACCTCATGTTTTAACTTTGTCACAGAAAAGGTGAGTTGATATTTGGCAGTGTTTGCATTTCACTAACCCTCTGTGCCTTCTGCTTAGTTTTTAGATGAATGCTATTACAATAACATATCAGGATGAAATTACCAAAAAGTGTTAAGTGCCTCGAACCTGCCTCACTAGATAGCAATTTGAAACTGGAGTAAACCATGCCAGCCTTCTTACTTAACTGAAATGTCTGAACCAAGGGTTGAAAGACCAGTAGTTTATAATGAAGTCACTGAAAAATCATTTTAAATAACTTTCTTCTTTTTGGTACCTTTTATTCTCTTGGGAAAGATGATGAGCAAATTATCCAAGAATTAATTCTTATTAAACAGTCAGAATATCCTCCCCCCCAAAAAAATCTGAATTTGTCCTCATTAATTTTCAAGAAACATATGAAAAAGCAAATAGAATTAGAGATGGCATTGATTGTCTGATTATTTAACACAAATGAAATTTTGTGATTTAATGTGCCTTAAGGGAAATGTAAAACTTTCACAACAGGATTTTTTGAACTTTTACTGTGTTATCTATGCAATTAATTACTTTGCTTTTTATTTTGTCTTTTAAACTTCACCTTTATCATTTGTTAAACAGACTTGGGGCTGCCTCCTTTTCTACTGGGAGCATGTGCAGTTATGAGATGCACCCCCCCCAAAAAAGGAAGGGAAAAGAAAGAACTTTCTGGTAGCAAATCTGTGCCGTGAAGTAGATGTGACATGAAGATGCAAAGCGGGAGGATAGTAATTTTCTCTGAGCTGCACACACCAGCTTTTATTTCATGGCTTTGTCACAGGCTTTTCTCCTTCTGTGCTGTCACCTTTGAGAAAAACGATTGCACCTTCTCCAAGTCTGCCTTTTAACAGCTACAGTTGAGTTGGCAAGACTTCCCCAGCTCTGAATATAGCCATTTGCCGACTCCGGCCTCTTTGCGAGACTGACTCAAATCTGTGATCTTCTGTTCAGCATACACATCAGCAAAGTGAGAAGATGAGCACTAAATATAGGCTCTATTAACTTTACTTTTAGATTTACTGCCTTCAAAAAGTGCCTATTCTGAGAAACATAGACGTTCTTCCTACATATGTATGTACACACGGTACCCAGAGTCATACCGTGCAGCCTTCAAAAACACACCATCGAAAGGAGTAGGTGCTAAGATAAGGAAACCTTGCCAAATGGAAGAAAGTCACTCATTTCCAATATCCCCTCCCGAGTGGCACCGTGAAACAGGCTGCAAGCACATTTCCTGAGCATTCCTTGCTGATACAGCCACTTTATATTTTTATCCTACTGGATGGTGGCATATTGCTGAGGTTTCCTGTACTCTACTTCAAGGGAATAGATTATGCTTCATGGAATTGGAACATTTAGTCAGGAAAAAAAGGTTGTTTAAGAGAATCAATGAGCCAGGGCCTCTATTAGGATATGTGTCATATGTGTGTTTTATAAACTTAGCATTGGTGAGCTTAGAATGTCAGCACATTGCTTCTCCTTTTATCTCTCAGGCTCACATCAGTGAAAACTAAAGTCTTGGCTCTGACAATTGGAGGCTCAGGGGGCCAAATGCCCTTGCCAGATCCTTAGAGCATCTTTACTTTGACTCCTAAAAATAGTAGCACATGCTATTTACTGGCTTTTGCTTCCATGGTTCTGTCACTGATATAACAACTGTAGATATTGTCAATGGAGCAGCAGCTCAGCCTACAAAGTTGGATTCCTACCCAGCTGTGGCAATAAGAGAGGGTCCAGACCAACGGGGCAAAGTAGACTATGTATGATTTTAGGAAAAGGGTTGAAGGGAGGACGTGCTTCCAAAAAAGATCTTTCTCAATGTGTCGTCTGACTCAACCAGCTGGCAGATTACACTTGCCAAGTCGCTCTCTTCCCTTAGAAGTCAGTTAGCTCCATGTTTGCTTGATTCTGTCTCTGCTTTGGAAAGGCAAGGTACCTCCAGTGGGCCTTTCCCCAAGGAAGCTCTTGCCATCCTCTTGGTCACAAAGTTGTCTCCTATCCCACCCAATTTCACAACAGGAAGTAAAGGGAGACAAGCAATGGAAGGTGCTTCCTGTGTCATTGACATCAGTCACCATTCTACTTTCCATCTAAGGGGCTCCACTGCTTAAACTAGGGAGGAGGGCAGAACGGATCATGGTTTTATCATTACTAGAGTGTGGACCATCTTTCCTTAGTTGTCTTCATTTTATGAGATGACTTGTCTCCTTGAAGAAAAGTGATACTCTTCTCTAAAACTGTCTGCTCTTCCTGTTCATGTTCTTGTTATGTTTTTACTTTATTCAGTTTTAAACACTAGTCACTTTCTATTTTGTTAGAGAAAAATGTGCTAGATAAGAAGTTTTATGTAAACGTTAAGTGGTATTTACAAAAAGATAGATCAGGGAAAAGAGGGGTTAAGCCAGGTTTTCTCTATGCTAAATGTGTCAAAGAACAAGAATTTCCTACTAACTAGAATCATAGCCCCACCATGATTGCTACAAATCTGAATAGCATTCTCTGACTTAGGGAAAGCGACACAAAAAACACGTAGAGAACATGCCTTTTTTCACATATATGATACTGACAGAGCCATGGTATTCCCAAAATGCAGATTTCTCTTTTTTATTCTTAGCAAATTACATCGCTCCTCTACATCATGAACCATCACTGACAAGTCCAACATAGCCCTCGTGGTTCCTTGTAAAAGTAAGAGAATAAAATCTGTTATAAGCAAGTGATTTGGGTTATTTTCTTTTGTATTTATACATTACCACCTCTATTAAATCATGTTTAAATTTACCCTCTATCAGTTTTTTCTATCAATTGTTTTTCCAATGCTCTATAAGAATAAATATGAAAATCGTATTCCTTTTTTCTGTTAAAAAATTGCAACTATGTTATTATATTTAGAAATCCAATAAAGTTATTACATTTA EMBV3_21656 ACCTCGTGGCCGTCGTGGTTCACTGTGGAAGTGGTCCCAATCGAGGCCATTATATTGCAA Gene GeneID:525655|USP12P1:NM_001098059:52_cdna Constitutive 0 NULL GeneID:525655 12 GENE USP12P1 MGC140148 USP12P1 ubiquitin specific peptidase 12 pseudogene 1 EMBV3_15623 GGAGGCTGTGGAAACCGCGAGCGACAACAGAAAATGATAGAATCCAGTGGGAAGAACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40914 GCAGTTGAATAGACTCCAAAGAAATGAGAGGGAAACTGCCAACAATGCAAGGCCCCCAGG Gene BVV0101_022095 + 0 NULL GK000002.2:34551617-34578608 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102171 TCONS_00102174 TCONS_00102164 TCONS_00102170 TCONS_00102177 TCONS_00102169 TCONS_00102172 TCONS_00102168 1 XLOC_061823 Coding TCONS_00102174 XLOC_061823 Coding Coding DPP4 2:34554199-34572779 j TSS76161 1529 1 TCONS_00102174_2 151 7 0.918079552182572 0.00690840664903063 0.00648589669537438 0.00498753143530367 0.00294948670719493 0.00455399651763174 0.000801198250981767 0.00287372991556317 0.00605276205030973 0.00547324108072889 0.00012948905625535 1.19585552824048e-05 5.24995941004036e-14 0.0004190711181505 7.6011460250457e-08 1.35737070332644e-07 0.00390119530335235 0.00141837433185974 0.00176015941244097 0.00411411477268316 1.09433255570863e-07 0.00233332721934548 0.000777860443088973 6.61825099027563e-09 0.00107069437657252 0.00727884194108586 2.34297052753114e-07 0.00158110178365985 0.000196846495214352 9.24121608880549e-05 0.000123752326260702 NM_174039.2 DPP4 Bos taurus dipeptidyl-peptidase 4 (DPP4), mRNA. 0.0 1023 99.82 0.372138652714192 XM_005246371.1 DPP4 PREDICTED: Homo sapiens dipeptidyl-peptidase 4 (DPP4), transcript 0.0 1824 87.23 0.972531066056246 TCONS_00102174_2 sp|P81425|DPP4_BOVIN DPP4_BOVIN Dipeptidyl peptidase 4; 9e-105 320 100.00 0.993377483443709 2 coding 1 0 1 1 -0.0991633839960436 0.381236835656265 0.00627506609231179 0.950061441465203 GCTTCTGGGTGATAGTATTGCCCCATTTTTTGGTTTAAGACAGTTTTCAAAAATGGGATTTGTGGACGACAAACGGATTGCAATTTGGGGCTGGTCATACGGAGGGTACGTAACCTCAATGGTGCTGGGAGCAGGAAGTGGTGTGTTCAAGTGTGGAATAGCCGTGGCGCCTGTATCCAAGTGGGAGTACTATGACTCCGTGTACACAGAACGTTACATGGGTCTTCCAACTCCAGAAGACAACCTTGACTCTTACAGGAATTCAACAGTCATGAGCAGAGCTGAAAATTTTAAACAAGTTGAGTACCTCCTTATTCATGGAACAGCAGATGATAACGTGCACTTTCAGCAGTCAGCTCAGATCTCCAAAGCCCTGGTGGATGCTGGAGTGGATTTCCAGTCAATGTGGTATACAGATGAAGACCACGGGATCGCCAGCAGCACAGCACACCAACACATATACACCCACATGAGCCACTTCCTAAAACAATGCTTCTCTCTACTTTAGCATCTCAAAATGGCATGCCATTTAAAGCTTGTGAAAAGCTACTTTTGCTCTCATTATCTCAAAACTGCACTGTCAGGATGATGCCTTAAAAAAAAAAAACAAACACTCAAATCAAGAAATTTAAGTTTACCTTGTCCCCAAATTTCATATCTATAACCTGAAGTAGGGACTTCTGTCTTTGCAACAGACTTACCTTATGGAAATTTCAGTCTGTTTTTTTTTATTATTATTTAAAATAATTTCCATATCAGTTGGTGAAACAACTAAGAATTGTTTTTATGGGAGCTTTGCAGAGGTTCCCTGAGCAGCATTATTTTCTAACTGAACTAGTGCAAATTTTGTTCTCTTCTTTGAAGGAATGGCAGGATGTGGGCAGTGATGTCACTGAGGCAGGGGTAAGAAAAGAGGGGTTAGGAAGAGAAGCTGGCAGGGCAAGGCTGTGAACCCGAGTCCAAGCCTGCTGACCCAACCACGCTACTGTCAGCTCCTCAGAGAAGAGCTGTTCACAGCCAGACTGGCACAGTTTTCTGAGAAAGACCATTCAAACAGTCTCAGGAAATCATAAATGCAAAGCACTGACTTCTGAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGAGAGGGAAACTGCCAACAATGCAAGGCCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACAGAAAGGGTGATGGGAAAGCATTGTAAATGTGCTTTAAAAATACTGATGTTTCCTAGTGAGAGAAGCAGCTTGGAAGGGAGATGTGAACACATCAGCTTGCCCTGTTAGGATATGAAAATATTTGTATTGCAAATCCTAACTTGAAGGAGTCTTTGCATCAGTTTTTCTTACTTCATTTCTTTGAGCATCTAATTAAAAAGAATATTTTAACTTTCTTGGACTTGTTTTTAAAAATTGAAAATAAGCTACAAATGTATATAGTATGATTCCCATTCTATATACTGTGGAATTTCTCCTGGTCAGTAATAAATATGCCTTCATTTTTTTCAG EMBV3_29150 CAGCTCTGTTCTTATATGGTAGTTGGGGTTTATATCATGGGCTTGACTGGTGCCACAGCT Gene GeneID:505660|LOC505660:XM_002699134:224_cdna Constitutive 0 NULL GeneID:505660 29 GENE LOC505660 NULL similar to olfactory receptor 967 EMBV3_03922 ACTAGACTCCAAAGCCAGAGGACAACTACTCCTGCGAACCTGTCGAAGACCTGAGACCTT Gene BVV0102_211509 + 0 NULL GK000003.2:8040507-8160870 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171864 1 XLOC_103929 Coding TCONS_00171864 XLOC_103929 Coding Coding FCGR2C 3:8032015-8076840 j TSS128103 4376 1 TCONS_00171864_4 231 0.453610603290676 6 0.902507585222202 2.57126531000974e-34 6.214367489651e-23 0 0 4.79189058214181e-22 3.76442575214147e-10 0 1.95938434734173e-18 2.70451273224072e-05 3.7609666540662e-06 4.01669674117864e-07 2.04278236879975e-06 6.55685418860192e-07 4.44150846870603e-06 3.4329222962291e-06 0.00283811134818608 0.000147600630472929 0.000565313671957377 2.01438565381093e-07 2.34768440560776e-07 3.14668940982705e-10 0.00175061052580421 0.00140531263338696 0.00126593326842126 8.22722242627738e-24 0 2.53085457645748e-06 4.02566936436701e-05 1.62035100166533e-05 1.68386005550557e-05 XM_005203553.1 FCGR2C PREDICTED: Bos taurus Fc fragment of IgG, low affinity IIc, receptor for (CD32) (FCGR2C), transcript variant X1, mRNA. 0.0 3606 100.00 0.456581352833638 NM_201563.4 FCGR2C Homo sapiens Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene) (FCGR2C), transcript variant 1, mRNA. 8e-130 470 74.25 0.16819012797075 TCONS_00171864_4 sp|Q28110|FCGR2_BOVIN FCGR2_BOVIN Low affinity immunoglobulin gamma Fc region receptor II; 5e-151 427 94.91 0.930735930735931 2 coding 1 0 1 1 -0.215888094526037 0.197429457261376 0.0190952771610301 0.684560771403925 GAAAAATAAGTTTTCTGAAGAAAGGGTCTTAAAATGTTAACAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTTTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGAGGGCCTTGTTCACCGAAACTTGGTCTCACCATGTCGTTCTTTCTCTTACCTTCTGGCTGAACTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTCCATTACTCTTTATATCTTTAATTAAAGTTTAATTAAGCAGTTGTTTCCTGATCCTCGCCGACACCGTCCCCGCTTCAAATTCCCTGGATCCACCGGGGCTGGACCCCGGCATTTAATAATCAGGAGGGGGAGATGGGGACTAGACTCCAAAGCCAGAGGACAACTACTCCTGCGAACCTGTTGAAGACCTGAGACCTTGTTCAAGAGGAACACCATTAAATCTCCCTCAGATAAAATTTGCCCACTGGGTGGAATCTATCAGGCCTCGAGAGAAGCCAGTGCCTGTCGTGCAGGGCTGTCAGAGCAACCTGCTCGCTCCAGGAGGTGATGGGGATCCCCTCATTCCTAGCCTTCCCTGCTGCCAGGAGGAACCGAGCTCACTGCACGCCCTGGCATCCTTGGGGCCACATGCTCCTGTGGACAGCTCTGCCTTTCCTGGCTCCTGTTCCTGGGAAATGTGCAGATCTCCCAAAAGCTGTGGTGAGCATCCAGCCTGCGTGGATCAATGTGCTCAGGGAGGATCACGTGACGCTGATGTGCCAGGGGACCAGCTTCTCTGCAGGCAACCTCACCACATGGTTCCATAACGGGAGCTCCATCCACACCCAGAAGCAGCCCAGCTACAGCTTTAGGGCCGGCAGCAATGACGGTGGGTCCTACAGGTGCCAGAGGGAGCAGACCAGCCTCAGCGACCCTGTGCATCTGGATGTGATTTCCGACTGGCTGCTGCTCCAGACCCCCAGCCTCGTGTTCCAGGAAGGGGAGCCCATCATGCTGAGGTGCCACAGCTGGAGAAACCAACCTCTGAATAAGATCACGTTCTACCAGGATGGGAAATCCAAGACATTTTCCTATCAGCGCACCAACTTCTCTATCCCACGCGCCAACCTCAGTCACAGAGGCCAGTACCACTGCACAGCGTTTATCGGGAAGATGCTACACTCATCACAGCCAGTGAACATCACTGTCCAAGATGGGAATGAAGGTTGTTCAAGGAGATGTACATCTTGGAAAGATGGGTAGTGAGGGGATTACTAATCTTCTGGACTCCAGAATGTTTGTTTTCCTGGGAGCGCCTGTTTAACATAAACAGGAACCCTGAAAGTCCTAGCTTGGCCTGATGGTTATATGAATGTGAAGCTGTGTTCCCGGTCATTTCTCAGGGATTATAGAAATGGGTGTCATTTATTTGGTGTTTTAACTCTCAGGGGACAAAATCCACCTTTTCAAGCTCCATATCCAATTCCCAGACATTGCCATTCTCCCTCTTTTGCATCTCACTCAAACCACTCTATCATGTGTCTCTCCCGGCGTCTAATGCTTGCTGCGTTTCCCTACTGAGCCTCTCACCCTAGGATCGACTCTTAGCTTGCTGCAGCCATGTTGGCATTAGAACCTCTCTCTACACATAAAGAACTAGACTTCTGCCTGTTCTTGAGAAACTGTACATTGTGGAATCCATATTATGTCCTTTCAGACGGTATCACAGATTATTTATGCCAGCCTGATGTTCATTAGTGAGTACCCAGCCCTGGGTTCAGAGGAGGTGGTGAGTGAAGATGTGTTGATGTCATCTGTGTATTCCCGAGTTCAATGTTGCCCAAAGGCTGTTCCCCAATCACATAACTCTTTGAGAGCCCTTTCAGAATGAAGGGTTCTGTGGTCAAATTAATGCAGAACACACTACATATTCTTTTCCTCTCCTTTTATATTCATAATGCACACCAAAGGCTTCAAGAAGCCCTGTCTCAAAGAAAACTTTTAAATTGAGCCTGGTAAGGCATTTGCTAAACTCAGGTAACCACAGAACCCTTCTTCTTCTTCTATAACTTTTCTTAATGTTCTGCAGAACAGATGTGTTTGAGGTCATCCTTTGGGAAATGCCGATCCAGCACTTTATTTGGGAAGGCAGACAGACGAAGCGATCCACTGAAGACTTCCTGGGGTAGCTGTCTGCTCCTGGCCTTGGCTTGGGTTGCTTTGCAAAGACTCCTCACTAGGGACATGACTGTTCCAAATTTCTGTCTTAACAACTGTAATTTTTCCTATTCCTCTGCCTCTCCGATTAGGTCCAGCAGTTCCACTCATCTTTTCACCTTGGTATCAAATCACTTTCTGCCTGGTGATGGGACTCCTTTTGGCAGTGGATACAGGCCTGTATTTTTCAGTGCAGAGAGACCTTCAAAGCTCCATGGGAGACGGGAAGAATAACAAAGTCAGATGGAGCCAAGACCCTCAGGACAAATGACCCTTCATTCCATGGTGTAACAGCAGTAGTGGCAGCAACTCTTCAGTCCATAACTTTCCTCTTCCCTGGCCTCACTTTGACAATAACCTGGGCTAAGGAGCCTCCAGGGAAAGAAAAGACCTGTGATCTCCAGATCAAGTAGAAGGTAACAGGCCCTGCCGCTGCTGCCGCCGAGTCACTTCAGTCGTGTCTGACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGAGATTCTCCAGGAAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACCCTCAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCCTCCCTTCACTGATTTCCCAAAGGCTAAGGCACAGTCCCCACCCATCCAGCTCTACATGGACTCACAGCAAATGTGTTCTCCCAGCTCCTCGCTAGAGGCTCCTCAAATATATGAAGCCTCAGTAAATCCTGGTGCTTCTTTCAAAGTAAATCCAACAATCTTCTCACTTCTCACAGGCTGCAGAAGGGCTCACGGGGGCCGGGGCTGCCTGGAGGGATGGCACAGCCCCAGGAGGGGGGTGGACGTGGCAGCATCTTGATCCAAGCCACCATCCTCTCTTACTTGGATTACTGCAACAGCCTCCTGCCTGGTCTTCCTGCACACAACCATGTCACCCAACAGTCTATTCTCACAACAGCCAATGTGTGTTGTATCTGTCACTTCTTTTCTGGAAGCTATGTAATAGCTTCCCCCTTGCATTTAGAGTAATAGCTAAAGCCTTTGCAATGTTCTACGAGGTACTATATGATCTTGCTCCTCAATGCCTCTCTGACCTCATTTATTGCTCTGTTTTGCTTCCTTGGACACTTCAATTATACTTCTGCTACAGGTTTATGTTATTTACTCTTTCTGAAATGTTCTTACAGATATCCGCATCATGCTTCTTCATGGTCTTTACTCAAATATCACCTCATCAGTGAGGTCTCCTTGGTCATTCAACCTAACCTCACTCCTCCACCATCTCCTAATCCTGCTCTCCTGCTTTATTTTCCCCCATTGTTCTCATCTCCAGCTGAATATGTTCAGTTGTTTATTGCTGTATTTTTTCCCCCATGGATGTATCACCAACTGACTACTCCCTCTCTCATTAAAACATGCTCCAGGAGATCTGGGCCTTTGTTTTGTTCACTACTATATACTTAAGAGTCAAGGTCAGGGTCTGGCACATGATAAGACCCTCAATACATATTTATGGAATCAGTAAGTTCTTCAGCATTCAAAATCAGACACTTTTTTAAAAAGTACATCTACTCCATCTTACCAGAAGCAGAAGTCCAATTCAGTACTACTGAACACCCTACTAGATACTACCCAAAATATCCCACTAGTACATGCATTTCAGCTTTGAATGTTATCTGTCTAAACTCATTTTTTACTTTCACCCATCACATCTTGTAAAGTAGTGTATTAGTTGGACCTACTGCCCTCTAATTGAATGGACTTTCTAATCCTGTACAGTAGCCGTGGAAAGCATACTAAAAAGAGAGTTGAACAACTTGGGTTTGTGTTTCTACCATTTGCTAGGTGCTTTGTCTTGAAGAATTCATTTAACTACTCTATGAATTAGATTCTTCTTCTGTGAAATAGTGATATCTTTATCTCCCTCCCCAGGGATATCATGTGAGGTTAAAGTGTAACAACATACATGGAAGCATAATGTCTTTGGAACATAGTAGATGTTTAATAAATGCTTATGGAATCTGATGTCTTCAGAGCA EMBV3_19756 CAGGGTGGGGGGCGGGTGGGAGGGGAAAGGCAAATGCAGATATATATTGAAGACAAATAA Gene GeneID:537808|NRXN2:XM_002699334:190_cdna Constitutive 1 NULL GeneID:537808 29 GENE NRXN2 NULL neurexin 2 EMBV3_42000 GTCCATGCCAGTGAGATGAACTGTAACAAGAACAGAAAAGACGCATAAACCATCGAAGCT Gene GeneID:534359|CLVS2:XM_002690069:23_cdna Constitutive 2 NULL GeneID:534359 9 GENE CLVS2 RLBP1L2 clavesin 2 EMBV3_21220 GCGGCCCTCACGGCGGTCCGCCCTTCTAGGCTGTTGCAGAGAACGGTGGTGCCGCCTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27830 TTTATGGACATGGCCAGCTTTCTCACAAAATGGCTTATGAAAGGAGTGTGATGCAGGATT Variant GeneID:281512|TAC1:NM_174193:9_cdna 432^485 2 EMBV3_17352 GeneID:281512 4 GENE TAC1 TAC tachykinin, precursor 1 EMBV3_15010 TCCTTGGTTCTAGCGTACATTTCTCAGCTTCTTCCTTGGCTTCAGGGAAACACCAGCTCG Gene BVT0102_091602 + 0 NULL GK000026.2:21738758-21760460 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05161 GTGGACTGACACAAGTCTCTATTAATCGGGGTGGGTAGAGGGGTCACTTTGATTTGGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24538 CCTCTCAGACTTTCTGTAAAAGAAAACCAGGTTGTTGGTGACCAGTGGCCCTCCCGGGAG Variant GeneID:783802|LOC783802:NM_001077891:147_cdna 208^296 1 EMBV3_14669 GeneID:783802 21 GENE LOC783802 MGC133521 WD repeat domain 73-like EMBV3_40798 CGACCTCATCAACTGGGCGCGCCGGAGCTCGCTGCCCGCCTACGGCCGAGGCCCTGCTGT Variant GeneID:338079|NDUFS7:NM_001038022:17_cdna 259^569 3 EMBV3_08050 GeneID:338079 7 GENE NDUFS7 MGC133683 MGC152557 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) EMBV3_02258 TCGGCCAGCCATCATTCCCCATATGAGAGACCTGCTTGATTCCTAACATAAAATCCCACC Gene BVV0101_009608 + 0 NULL GK000007.2:61422113-61579936 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217342 TCONS_00217340 TCONS_00217341 1 XLOC_131485 NonCoding TCONS_00217341 XLOC_131485 NonCoding NonCoding SPINK6 7:61468010-61537222 x TSS161871 417 4 0.994032740460331 0.000430837204255919 0 0.000392548490535904 0.000602498468538703 0.000432507108266903 7.90491607088621e-05 0.000214523754671771 5.11162549971701e-11 0.000255979782065958 0 0 0 0 0 0 5.33813269770521e-05 0 0 9.58163579589671e-06 0.000684746691201382 1.63378411404358e-33 3.37226955398774e-15 0.00124572680180417 0 7.39156585210354e-08 0.000772868172810157 0.00175814738597497 0 1.16416181631931e-05 0 XM_003586954.2 PPFIBP2 PREDICTED: Bos taurus PTPRF interacting protein, binding protein 2 (liprin beta 2) (PPFIBP2), mRNA. 4e-07 59.0 94.59 0.0863309352517986 0 noncoding 1 0 0 0 -3.92038639000686 0.0353774463565511 -0.144281549036598 0.0603467378838731 GGGCTGGCCCCAGGCCCAGCCTTGTGCAGGAGCCGGGTCACAAGAGGGCTCTGGGACTAGTGCAGTCTTAGGGTCCTGAAGACTCCGGGACTGTTGCTCGCCTACTGGCTGAGCTGCAGCTCCCTACTCTCTCCGTCCGCCTCTCCAGGAGACTCTCCAAGACCAGCAGACAGGTCCTGCATGTCTGTGATCCCAATGAGTCACCACCACCAGGGAATGGAATCTCGGGTGTAACTTGGCTTTTCAGACTCCACATCATCCAAGATGTACCTAAAAGAGGTTTATTTTCTTGACTTACACAGAGAGTATTCCATCTTTCATTTCGGCCAGCCATCATTCCCCATATGAGAGACCTGCTTGATTCCTAACATAAAATCCCACCTTCAGTGGTTTCATCAAATTTATCAATAAAAGAGT TCONS_00213807 r 5' 4236 TCONS_00213807 r 5' 357 EMBV3_05043 GGGACCATTACAAATTAACCAACCAGTTTTTGGGAGGTCTTCGGATTGGCTTTGGAACAG Gene GeneID:614406|SYTL2:NM_001102278:38_cdna UTR3_Alt 2 NULL GeneID:614406 29 GENE SYTL2 MGC151530 synaptotagmin-like 2 EMBV3_32802 CCCTCAGAACCAACAATTTTCAACAGTGCAATGGCCAGGACCAGGATGAAACACATGCGG Gene GeneID:614924|NEK11:XM_002685106:6_cdna Constitutive 0 NULL GeneID:614924 1 GENE NEK11 NULL NIMA (never in mitosis gene a)- related kinase 11 EMBV3_39049 AAAGCCTGTGAAAAGCACGCCGGACAGCAGCAAAGAGCAGACAAGCAAGAGCCAGCAAAT Gene GeneID:527979|LRRC6:NM_001075904:26_cdna Constitutive 2 NULL GeneID:527979 14 GENE LRRC6 NULL leucine rich repeat containing 6 EMBV3_17554 GCCTGGAATACCTGGTGGAAAAGGCAAAGCAGGTACTGTCTGTGATTGTGGAAGATACCG Gene GeneID:512030|COLEC10:XM_002692717:148_cdna Constitutive 0 NULL GeneID:512030 14 GENE COLEC10 NULL collectin sub-family member 10 (C-type lectin) EMBV3_29569 CACCCAGAGTTTCTGTCTGGGATGATGAAAGCATTCTGGAAATGGACAGTGGTGATGGTT Gene BVT0101_026988 + 0 NULL GK000018.2:57858063-57862884 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087228 TCONS_00087227 1 XLOC_052406 Coding TCONS_00087227 XLOC_052406 Coding Coding SIGLEC8 18:57861363-57863541 j TSS64795 1249 1 TCONS_00087227_1 98 0.294635708566854 5 0.428571428571429 0.00175381708768587 0.000887870243145701 0.000629775275593858 0.000764592634713765 0.00130129063617893 2.29113539116517e-05 0.000285847015005762 0 0.000328491577306868 0.000240478885303741 0 0 0 0 2.27275783547174e-18 0 0 0 0.000284197042773723 0.00126310543893 0.000204163883370092 2.37649192771912e-05 0 0 0.000416040615247213 0.000874471844721571 0.000714290857151053 0 0 0 XM_005195478.1 LOC506364 PREDICTED: Bos taurus sialic acid binding Ig-like lectin 8-like (LOC506364), transcript variant X2, mRNA. 0.0 1815 99.90 0.808646917534027 XR_243922.1 SIGLEC8 PREDICTED: Homo sapiens sialic acid binding Ig-like lectin 8 (SIGLEC8), transcript variant X3, misc_RNA. 3e-59 233 79.92 0.210568454763811 TCONS_00087227_1 sp|Q96PQ1|SIG12_HUMAN SIG12_HUMAN Sialic acid-binding Ig-like lectin 12; 7e-16 73.9 49.44 0.846938775510204 0 noncoding 0 0 0 0 -0.344374360301222 0.0950076601790592 0.0230213143106802 0.641213230637233 CTGACAGCACTTAGGGATGTCCTGTGTAGGCCAAGAGCCTCCCTGTTTGCTTCGTGGGGACTGGATCCACCAGGCAGAGCCCATTAGCGCCGACTGAGCACACAGCGGTGCTGAGGGACCACGCTCACTCTGTCTCTCTGGATCCCTCTCACAGACATCCAAAGCCCAGGAGAACGGATCCTCTCTTTCAGTCTCGGAGGGCCAGTCCCTGCGCCTGGTCTGCGTCGTTGACAGCAACCCCCCCGCCAGGATCAGCTGGGCCCGGGGGAGCCTGACCCTCAGCGCCTCGCCGCCCAGCCACCCAGAGATGCTGGAGCTGCCGCGGGTGCTCACAGGAGACGAAGGGGAGTTCACCTGCCGAGCTCAGCACGCCCTCGGCTCCCAGCACGTCTCCCTGAGGCTCTCGCTGCAGAGGCGGTCAGCGCGCCCGGCAGAGGCGGTCCTGGTAGCCATCTGGGAAGTGGCTGTCAAGACCCTGCTCCTCCTCCTCTTTCTCCTGGGCCTCCTAGTGAGGTGCTGCACAAGGACTTCAGCCAGGCCAGCAGGGGGCGTGTCAGAGGCAAAGGAAACCCCACCTTTAACCCCTCAGCACAGCTCATCTTGAAGCCCATCTCCTCCCGGTCCTGACCCTGGTCCTTCCAGCAGCCTCATCTCTTCCCTGAGTCGCTGAACCCATGCATCTCCTGCTTCCTCTCGCTGGGAAGCACGGCCCTCGGGTCAGAGGACTCACCAGAGACGGTTCCGTCCACTGCCCGCACAGTCGGAGCAGCTCTGTTTCCTCCCCACGCAGGGGATGGAGCGGCCCACACCACAGGCTGGATTCTAAGTCCTGGCGGGCTCTGCCCTGCTGACTCTCCACCCAGAGTTTCTGTCTGGGATGATGAAAGCATTCTGGAAATGGACAGTGGTGATGGTTTCACTAACATGGTGATGTACTTACTGCCACTCAGGTGTAACACATGGTTATTTAGTTGCTGAGTCATGTCCATTTTCTTCAACGCCATGGATTGTAGCCCGCCAGGCTCCTCAGCCCATGGGTTTTCCCCAGCCAAGAATGCTGCAGTGGGTTGCCATGTCCTTCTCCAGGGGATCGTCCCCACCCAGAAACTGAACCTGAGTTTCCTGCTTGGCAGGCAGATTCTTTACCATTGAGCTACCTGGGAAGCCCTAAAGTGTACTGTATACAATGTTAAAAATAATTTTTATTTTATGAGTATTTTACTGAAATAAAGCAAAAGGAATGAGGAAC EMBV3_01047 GCCTAAAGAAAGCTCTGAAAATAGCAAATCAGTGCATGGACCCCTCTCTACAAGTGCAAC Gene GeneID:521864|VPS35:NM_001046258:285_cdna UTR3_Alt 1 NULL GeneID:521864 18 GENE VPS35 MGC128544 vacuolar protein sorting 35 homolog (S. cerevisiae) EMBV3_37653 CCCTCAAGATATCAGTGCTTCAGAACAAAGGTTTACAACAAACACCGCACAAGTCCTGCA Gene BVV0102_328158 + 0 NULL GK000007.2:72804183-72843639 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00222257 1 XLOC_135566 NonCoding TCONS_00222257 XLOC_135566 NonCoding NonCoding - 7:72841109-72841505 - TSS166255 396 1 TCONS_00222257_1 69 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000134850259299354 0 0 noncoding 0 0 0 0 GCTTCAACCAAGGTGTGGCAGTCGTCAGCACAATTGATGCCTTCTCTTTCCAGGCCCAGGAGGAAGACTGAACTTCCACAGTCTTGTGTGGATGGGACCACAGCTGTGGCCATGGGGTGGTAAGCAGAGAAGACATGGGTCCACTGCCAGGAGGAGCATGGACAGCCTTCCAGAACCTTTCACTTTGCTGTCACCACCAGGCAGGTTCAAGACCGTGATGGTTCCTTCAGCCTCGATACCTGAGCGCCTGTACCAGACACAGCACCTCACCTGTGCAGGACTTGTGCGGTGTTTGTTGTAAACCTTTGTTCTGAAGCACTGATATCTTGAGGGTTTTTTTTTTTAACTGCAACATAATCTTGCTCCCCCAACTGAAACCAAAGGATATGCACTGAT TCONS_00217682 TCONS_00217675 TCONS_00217676 TCONS_00217677 TCONS_00217678 TCONS_00217679 TCONS_00217680 TCONS_00217681 TCONS_00217683 TCONS_00217684 . 3' 2129 TCONS_00217682 TCONS_00217675 TCONS_00217676 TCONS_00217677 TCONS_00217678 TCONS_00217679 TCONS_00217680 TCONS_00217681 TCONS_00217683 TCONS_00217684 . 3' 2524 EMBV3_39403 CGCGGTGAGATCTTGGGCTTTTGGGAAGAGGATAGGCTTTTCTGGGAAGAGGAGAAAACC Gene GeneID:515635|CCDC70:NM_001075723:115_cdna Constitutive 0 NULL GeneID:515635 12 GENE CCDC70 MGC151996 coiled-coil domain containing 70 EMBV3_26741 CGCAACATCATCCTAGGCAAGTCGCACTATGTATTATATGGACTGGTGGCTGCCATGCAG Gene GeneID:539784|PSMD2:XM_002684875:78_cdna UTR3_Alt 2 NULL GeneID:539784 1 GENE PSMD2 NULL proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 EMBV3_40183 GCACAGAGTGCATTTCTGCTTTCCACCCTGAATTCCTTTCAGTGGATGTTGAAAGTCAGC Gene BVV0102_071380 + 1 EMBV3_33671 GK000022.2:6554797-6666780 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129705 1 XLOC_078418 NonCoding TCONS_00129705 XLOC_078418 NonCoding NonCoding - 22:6662280-6663098 - TSS96572 818 1 TCONS_00129705_1 51 0.793398533007335 1 0 0 0 0 0 0 0 0 0 0 0.00161964493495413 1.67910886777934e-05 0.000197331021944206 0 0 0 0.000161439935078408 0 3.06734560329253e-05 0 1.7582969436768e-06 0 6.3501964296129e-05 0 2.04946564160546e-05 0 0 0 2.34845326739453e-05 2.37388804441508e-05 1.46998496417159e-05 XM_005193557.1 LOC521257 PREDICTED: Bos taurus uncharacterized LOC521257 (LOC521257), mRNA. 7e-59 232 77.96 0.371638141809291 0 noncoding 0 0 0 0 0.0306554982303223 0.823883141890282 0.00486343951008003 0.917009024387774 GAGGGGTACATGAAGTGAAGCATGTGTTTTTTGCAGGTTTCTACTAGTCACGAGGAGAAGTGGTCATCGTGAAGGATTTTAGTGCTTTTCTAGATAATGAGGAGATACAAGAATTGGGCTCATAAAATCAGCTCCTGAAAATATTTAACTATCTGAAGCCCTGTTCTGCCAGTTTTTCCCAAAGCACAGAGTGCATTTCTGCTTTCCACCCTGAATTCCTTTCAGTGGATGTTGAAAGTCAGCAGCTATAGCAGCAAGAGATTTAATCCTTGTAGAGGCAGATGGCAAGTGCCAATTTGTACTTCACAAGATTCTGTGCTTTCACTGCCTAGGGCCCAGGTTCAATCCCCAGTTGGGAAACTAAGGTTGCCACATGCCACGTGATATGGCAAAAAAATAAAATAAATAAAATAAAAAATAACTAATAAGAACCTACTGTATAGTACAAAGAACTCTACTCAATACTCTGTGATGATCTATATGGGAATGGGATCTAAAAAAGAATGAAAATATTATCGTACAGAGAACTCTACTCAGTACTCTGTAATGATCTATATGGGAATGGAATCTAAAAAAGAATGAAAATATGCACATGTACAACTGAATCACTTTGCTATACACCTGAAACTAACACAACAATGTAAATCAACTATACTCCAATAAACATTAATTAAAAACAAACAGGCTCCCACCTGGCCTCTGTCTCCTGGCCCTGAGGATGTCAAGCTCCTTCCAGAAAGTCTACAATGGCTTCTTCTGCCCTTAGGATTTCAGTTTTAATTCTCTGATATGGTTTACAAGGCCAATCATGACCAGAC TCONS_00125842 . 5' 3679 TCONS_00125842 . 5' 3679 EMBV3_34891 ATCATCAAAACCAGAATTGGGGGAGCTTCCTGGTGGTCCAGCGGTCAGGACTGTAGTGCT Gene BVT0101_004361 + 0 NULL GK000025.2:26996170-27014541 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146714 1 XLOC_089185 Coding TCONS_00146714 XLOC_089185 Coding Coding ZNF689 25:27009494-27018837 = TSS109622 7157 1 TCONS_00146714_5 500 0.345955009082018 3 0.234211089702419 0.000612866558596246 0.00109371600950538 0.000501586627362517 0.000119244599082289 0.000231723274336238 0.000150070138538868 0.000180729095072939 0.000151120849019127 0.00055320288039476 1.75622882709799e-05 1.3309936233558e-06 6.9493395803196e-07 2.22515069210377e-06 6.56208611611141e-05 0.000159697203126543 0.000295225319203407 0.000134543975181485 0.000294485787341325 0.000676813910450993 0.000841027821865786 0.000248981946817698 6.59312763098362e-05 5.89640390368244e-05 8.71375291659569e-05 0.000633418767724821 0.000432687653303996 0.000576920350171218 5.90500273410787e-05 5.18081339374019e-05 5.71234354739117e-05 NM_001083746.2 ZNF689 Bos taurus zinc finger protein 689 (ZNF689), mRNA. 0.0 3727 100.00 0.288528713147967 NM_138447.2 ZNF689 Homo sapiens zinc finger protein 689 (ZNF689), transcript variant 0.0 2729 84.09 0.346653625820875 TCONS_00146714_5 sp|Q96CS4|ZN689_HUMAN ZN689_HUMAN Zinc finger protein 689; 0.0 934 92.81 0.996 6 coding 0 0 0 0 0.0104095210942357 0.928153263506589 0.0083154975493587 0.898159809824077 TGGAACGGGGGGGGGGGAAGGGCGTGAAGCCCAATCGCAGCGCCATCACACTTGAGGGCAAAGAGGTTAGGCAGCCCGCATGGCGCTCCGGTCAATAAAATCGATAGCTGGAAGCTGCCTGTGTCTCAGGCAAAGGCGGTGCAGTAGCGGCGCCGCCATTTTCCCCGAAGGCATCTTCCGGTGCCTTTCATCCAAGTTCGGGCAGGAGTTTCCTGAATAACAGCGAAAGGTTTCCGTTAGCCCCGCAGGCGGCTGATTCCGGTTCCCGCCGGGCCTCCCCAGCACGCTCCGCACGGGTCCGGCGGGGGCTCCCAAATCCCCGGCCCCTCCAGCCCCCAGGGGCCGACGCTGGGACGGGCAAGGCCGTGGTGCCAGCTTCTCGGGTCCAATGGCGCGGCCTTCGGCTCCGCTTCCCGCGCGGGGACCAGGAGAGGCCAGACCCGGCCGGAGAAGGGGAAGGAGACCGAGGGCGGTGAAGTTCGGGGACGTGGCCTTGTACTTCTCCCGGGAGGAATGGGGGTGTCTGCGGCCCGCGCAGAGGGCCCTATACCGGGACGTGATGCAGGAGACCTACGGCCACCTGGGCGCGCTCGGGTGCGCAGGTCCCAAACCAGCCCTCATCTCCTGGTTGGAACGAAATACCGATGATTGGGAAACGGCTGCCCTGGATCCACAGGAGTGCCCAAAAGGGGTAGCAGTCCAAAGAAAAACCAGAAAGAAGAATGAAGAGAAGGAAGTATTCCCGCCTAAGGAGGCACCCCGAAAGGGGAAGCGTGGCCGGCGGCCCAGCAAACCCCGCCTGATTCCCCGGCAGACCTCAGGAAGTCCCATCTGCCCTGACTGTGGTTGTACCTTTCCCGATCACCCAGCCCTGCAGAGGCACAAGTGTGCCCAGAATCTGAAAAAGCCTTACCCTTGCCCAGACTGTGGACGCCGCTTTTCCTACCCGTCCCTGCTGGTCAGTCATCGGCGGGCACACTCTGGGGAGTGTCCCTACGTTTGTGACCAGTGTGGCAAGCGGTTCTCCCAGCGCAAGAACCTCTCCCAGCACCAGGTCATCCACACAGGCGAGAAGCCCTACCACTGTCCTGACTGCGGCCGCTGCTTCCGGAGGAGTCGGTCCTTGGCCAATCACCGGACCACGCACACGGGTGAAAAACCCCACCAGTGCCCCAGCTGCGGGCGTCGCTTCGCCTACCCCTCCCTGCTCGCCATCCACCAGCGCACACACACCGGAGAGAAACCCTACCCCTGCCTGGAATGCAACCGGCGCTTCCGCCAGCGCACCGCCCTGGTCATCCACCAGCGCATCCACACGGGCGAGAAGCCCTACCCATGCCCAGACTGCGAGCGGCGCTTCTCGTCATCCTCTCGCCTGGTTAGTCACCAGCGGGTACACTCTGGGGAACGTCCCTACGCCTGTGAGCACTGCGAAGCCCGCTTCTCGCAGCGCAGCACGCTGCTCCAGCACCAGCTCTTGCACACGGGAGAGAAGCCGTACCCCTGCCCGGACTGCGGCCGCGCCTTCCGACGGAGCGGCTCCCTCGCCATCCACCGCAGCACGCACACGAAGGAGAAGGAGAAGTTGCACGCGTGTGATGACTGTGGTCGCCGATTCGCCTACCCCTCACTGCTGGCCAGTCACCGGCGCGTCCACTCGGGCGAGCGGCCCTACGCCTGCGACCTGTGCTCCAAGCGCTTTGCCCAGTGGAGCCACTTGGCTCAGCATCAGCTCCTGCACACGGGGGAGAAGCCCTTCCCCTGCCTGGAGTGTGGCCGCTGCTTCCGCCAGAGGTGGTCTCTGGCGGTCCACAAGTGTATCCCCGGCGTCCAGAACTGTGGCCCTAGATCTGCCATAGGGGCGCCTAGCCAGAAAGGCCAGGCCCTTTAGAAGGGGAGGGACTGTGTAAGTTCATTTCACTTCATGGAGGGGGCCCAGAAAAGGGAAGGAGCCCCCTGATCATACAGGTCAGAGTCAGAACTGAAACCCTGTTGCTACACAGAGCTGAAGTTTAGTGTATTCTACCATGCTGGCTGCCTTAATACCTGCGTCTAGAACAGACAGCCTCAGTGACGAGAGGGGACATTATGCAGTAAAAATTTTTCAACCTGCCCTGTCCTAAAGGACTTGTGTGTGGGGTATCAGGCTAAAGGTTCTCCCCATCTAATTTAGGGGCTGTGTTTTCTAGTTTGTGCATGCAGTCAGGAGGATCCCATTCATGGGGTGCAAGATCTTCCCCCTCCTCTGCCTCTTCTTCCTTGCTAGGTTTGAAACAAACTTGGTTTAGCCCCCTTTTGACAGTATTCCTGCCAAGTGATCTGCCCTTTAAAACCTCCCTTAATGCAGCTCTCTACCTCACAAGGCGGGTCCTTTCACTGTGGCATAGCTCTGACTTTTAGAAGGCCCTTAAGTACTACATTCTCCTTCCCTGGAAGCCTTGTCCAGAATATGTTTAAAACTTGATCTACGTGGCAGCCCTTCAGAAAACTTAATCACAGATACGTTTCCATGTTTTCAGGTTCAGTTCAGTCGCTCAGTCGTGTCTGACTCTTTGCAACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTTTTCAGGTTAAATAGCATTAATTTGGTCAATCATTCCTAAAAGACAGGCTTTCAGTTCCCACACGTGATCTCTCCCCAGGCAGGTGCTGGTTTTTTGATGTCTTTTTTAAAAAGTCATACAAAATAAGCCAGCATCATAGTGTGCACTATACCCCCTTGGTCTGTACTTGTTTGAAGAGGTCTAGATTGTACTGGATTTGGAGGTGGTGACAGTGTACCAGGGCTTTATTGAGTTGCAGACACCTATATATCTAAGCTTTTTCTTTTTAAACCACGTGCTGTGAAGCTAAGTCTTCTGCATTCTGCATTTGGAAGTTTGGTTCAAGGTAGGTCTGGGACATAAGCACAGTGAGTTTTGGGAGACTGATTTTAAGGAAAAGCAGGGTGGGGGAACTGTGGTCTAGCAGCAAGAAGTAAAACCAGGACCAGCTTGTACTTTATCTGGTGGATTTGAATTTCTTGGGAACTGGGTCTCGCTCCTCCCTAAGTCTCATGAGAATAAGGAGACACTAGTACAGAACCTTCTTTTGATTCCTCTGTCAGCATCTTTCATGAAATGAGGCGAGGCCATTCAGGGAAGTTAGAAAGTTAGGTAATTGAATATGAAGCAGAAGTCTAGTCATCAAGTTATGTTCATCCCTGCCTCCCTCACAGAAGCTCCATATGGCAGCAGCAACATGTTTTAACCTTTGATATGCCTTCATGGCACCCATCCCTAAGTAGGTACTCGGTAAAACTTTACTGAATTAAATAAACAAGGCCTACCACTTGGCCTTGGGGAGCTGCACCAAATTGGAATTTCCAAACATGATGTATAGTCCAAACCTTGGAGTTGGTCATCCTCCTGCCCATTGCTTCTTCCCTCATTTCTTCTGCCATCAGCCCCAGGGATGTGTGGCTGGGGCAGAGTGTTTGTAATTACCTCTGTTCTGGTTTTTAGCAAGTTGAATTGTAACTGTTTCTTCTTGGATTGATGGGCTACCCCCAAAGCAGAGGTCGTATCAGATTGGGATTCATTAAAATGTCTGATGAGTGACTATGTTCCTTGTGGAATTATTGTTTATAAAATATAAATCTAGTTCCTTAACTGAGGAGACATTTTTATAGTTCTGATGGAAACCTTGCCCTTCCCTAGCAGAGACCTATTAGAATTCTGCTTCACCTTCTGTTGTAGAACTGATTCTTTTACCTACTTTTATCACCAGGCTAACCCAACTATTTCCTTTCCTAGGAGTTTTAGAAATTTCTTTGGACCTCAATTGTAACTCATAAAATTTCAGAGCTGTTGGTAGGCAATCCCAGTATGTGGTCTGTAGAGGGCTGAGATGAGACAAGTTCTTAGGTTTACCTCATCAGTCCCAGGATCCCAACTTCAGCTGGTTGATCTTCAACCAGCTATAGCCAGTGGGAGAGTTTTTGTTTTTGGCTGTGCCATATAGCTTTCGGGATCTTAATTCCCTGACCAGGAACTGAACCCATGACCTTTGCAGTGGAAGCTTGGATTCTTAATCACTGGACCATCAGGAAAGTCCCTGTAGTCAGTTGTTGATCCCAGTATTCTTCCAAGTAATTCTCTCTTCTGCTTCTGGTAGTTAAGAGTTTGTTACTTGTGACCAAAAGAATGAACTAATCTACAATGCCATTATGGATCTATCTCCCATCTGTCTTGATGCCTATGTGTGGGCTATGAAGGAAGACAATTACAACGCTGCTGAGAGGAGCCAGCCTTTCCACTCCATCCTCAACTGAACTTTCAACATTATTGTCTTTCATAGGTCCCAAACCACTGACTGCCTTCTCTTTCACTAAGAAAACAGGGTGTCAAATAAGAACTCCCGTAACATTCCACTCTATTGTCACTCCAAAAGTTCTGTGTGATCACTTGTTCTTACTTGCTGTCAGGGGAGGCCCCTCATACAGTGCTTCCCAATACAGGTATGCCTGGATTTCCTCTACTTCTGCCCCCTCATGGACTTTGCTCCATCTATTATTCTCTAAGTTTTATAGTTTCAGAGTCTTGTTTTTTTATTAAGGTACAAACATACCTTTAAAAAAAATTCATTATTTATTTGGCTATACCAGGTTTCAGTTGTGCATGCAGGCTCTAGTTCCCTGACCAGGGATTGAACCTGGGACCCCTACACTGGGAGTGGAGTCTTGACCCCTGGACCACCGGGGAAGTCCTAGTTTCAGAATCTCTTTTCTGGAACATACATACCAACCTATAAACATACTAAAATCTGTCTTTAAAAACAATAAATTTCCCTTGGCCTCTGTCCTAATCTGTTTTCAGCTAAATTTCTTGAAACAGTAGTCTATATTCACTGTATCCACTCTGTTTATTCTTTGGCCCATTGCCATAGTATTCTAGCTACTTTGTTGAGCATCTGTGATGTGCTGTGTACTGTGTTAAGCACTTTATATACATTCCTGTCTGTAGTTCTTACAAGAACGCCATAAAGCCAGTGTTAGGAAATGCTCCTCCTTGGGGCTCTCATGTCGCTACACATCTTGTTGAGTGTGCAAAAATGCAAGGCCCTGTCTTCAACAAATTCTCAGATTTGTGTCAATTCCAAAGCTGGGGCCTTTTGATAGGAGGCTGGGTCCCTGTGATGAAGGACTTTGTTACATTGGCAAAGACATGCTGTAAGTCTTCCTACTCTTTACCAAATACACCTGCACCCGTTTACCAGGGTGGCTGGGCATGGGAGAAGGAAAGTAACTAGAATTTTCAGGGTTCTAATTCTTAAGAGATCCAAATGAGAGAAATTTTATTAAATAAGAGAAAATGTTCTTCCAGAAATTAACCCTAATAGTTATGATTAATTGATTTGCAACAAAGGTGCCAAGACAATTCAAGTCTCAATCTTTTCAACAAATGGTCCTGGGACATCATAAGGAAGAAGTTGGACCTCTAATCATATACAAAAACTAACTCAAAATGAACCCCAGAACTAAACGTAAAAGCTATAAAACTTTGAAGGAGACATAAGTATGTTTGTGATTCTGGATTGGGAAATGGTTACTAAGCTATGACACCAAAGGCACAGGTGACAAAAGAAAAAACTGATGAGCTGATCATCAAAACCAGAATTGGGGGAGCTTCCTGGTGGTCCAGCGGTCAGGACTGTAGTGCTTTCGCTGCTGGGGCCTGGGCTCAGTCACGGGTTGGGGAACTAAGATCCCGTAAGCCATGCAGCACAGCCAAAACCCCAAATTGTAAAAACTACTTTGTGCTTCAAAGGACACCTTCAAGAGAGTGAAAATCCATAGACTGGGAGAAAGTATTTGCCAATCACAGATCTGAAATGGAATTTGCGTCCAGCATATATTTTGAAAACTTTGATACCAAAGACGGGCAAAGACACTACAAAAAAATTACAAATATCCTTTGTGAATATTGACATAGAAATCTTGAACAAAATATGAGCAAACCAAAGCAGTATACTAAAAGGTTTATATACCATGACCAAGTGGGTTTTATTCCTGGAATTTGAGAATGTGTCAACAGACAAAAATTAATCAATGTGATATGTCACCTTAATAGAATGAAGGAAAAAAAACCCAAACCATCTCAATTAATGCAATAAAAGAATGACAAAATTCCACATCTTTTCACAATAAAAACACTTAATGAACAAGAAACAGAAAGAAACTATGCTAAAAAACCATACATGAAAAACCCACGGCTAATAACATACTCAGTGGTGAAAGACTAAAAGTTTTTCCCCTGGAATTAGGAACAATGTCTGCTTTTGCCACTTCTAGTAAATATTATATTAGAGGTTCCAAGCAAAGCAAGTAGGCAAGAAGAAGAAATAGGCATTCAAATTAGAAAGGAAGAAGTAAAATTATCTCCATTCACTGACAACATGATCTTATATCTAGAAAACCCTAAAGATTACACACACTAAGAGCTAATAAATGAATTCAGCAAAGTTTCAAGATACAAAATCAACACACAAAAATCAGTTGCAATGAACAATCCAAAAAGATAACTCCATTTACAATAGCATAAAAAGAATACTTAGGAATAAATGTAACCCCAAATCAAAGTCTCAATGGTGATGAAGCTTTGAAACTAGAGACGTGGTGGTTATACAACATTGTGAATGCACTAAATGCTGCCTGATTGTACACTTTAAAATGGTTAATCATGTTTTGTCCAGGCAATACCCAGCTTGCTTCTCTTTCTCTTTTCCTCCCAACATTTTACTTTTAGAATTTTTCAGTGAACACCCATATACTCATCACCTATTTTCTACCCATTAGCATTTTACTATTCTATTCTTTATCACATAACTACCTATCTTTCTACCAGTCCGTTTTACTTTCTGATGCATTTCAAAGACATTGTCATCATCAGTACACTTCGCCCCTAAACATTTCAGCATGCATGTCATCAACTAGAGCTCAGTATCTGTTTTACATATTTTTGAGTCAAACTTACATAAAATGCACAAATTTTAAGTGTATTTTGCTGGATGTTGACAAATGCACCCATCTGTCTAACCCAACCCCCTATCAAGACACAGAACATTACCATCCTAGAAATTTCCCTCAGGC EMBV3_09495 CAGTGAGTTGACACAGGTACCCAGAAAGGTCATGCATCATATGAAAGGTGCAAGTCAAAC Gene GeneID:533735|MIB1:XM_002697721:42_cdna Constitutive 0 NULL GeneID:533735 24 GENE MIB1 NULL mindbomb homolog 1 (Drosophila) EMBV3_36589 AGAGATCTGAGAAAGGATCAGGACGGGCGGGCATTTTCCCTTTTCGTTAAAACTAAAGAA Variant GeneID:616726|TSTD2:XM_002689731:88_cdna 173^388 1 EMBV3_21070 GeneID:616726 8 GENE TSTD2 NULL thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 EMBV3_10377 GGATTCCAAGAAGCTCCAGGACTATTTCAGTTTGACTAGTATCTGCAACCATCACTCTTA Gene GeneID:613655|FBXO47:NM_001083759:165_cdna Constitutive 2 NULL GeneID:613655 19 GENE FBXO47 MGC155051 F-box protein 47 EMBV3_37225 CCTAGAGGAGGTAGCTATACAGTACTCTACATATTTATTTATTTATTATTCTGCCATAGC Gene GeneID:100337258|LOC100337258:XM_002687180:59_cdna Constitutive 2 NULL GeneID:100337258 5 GENE LOC100337258 NULL transmembrane and tetratricopeptide repeat containing 2-like EMBV3_27081 TTGTCAGGGCTTCCCCAATGGCTCAGCAGGTAAAGAATCCGTGTGCAATACAGGAGACAC Gene BVT0102_087622 - 0 NULL GK000007.2:93872600-95454540 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214610 1 XLOC_130729 NonCoding TCONS_00214610 XLOC_130729 NonCoding NonCoding - 7:93889010-93981168 - TSS160467 380 0.384210526315789 2 0.995898303981249 1.30551191165006e-115 7.93296983907087e-05 1.06615578137375e-98 0.000415207783117946 0 2.9895369004775e-05 1.79524853741655e-05 8.52834553600686e-166 0 0 0 0 3.36301636251044e-05 0 1.93665710046695e-05 0 0 0 0.000255618352036728 0.000537691203005631 0.000620175517554771 0 0 0 0.000101690180964586 0.000180757372025332 1.88650888795575e-05 0 0 0 XR_231685.1 LOC509006 PREDICTED: Bos taurus class I histocompatibility antigen, Gogo-C*0101/C*0102 alpha chain-like (LOC509006), transcript variant 1e-14 84.2 82.72 0.210526315789474 0 noncoding 0 0 0 0 -0.345867499479639 0.0243527844218237 -0.0827491200880504 0.166270876760593 AGAAAACCACCTGAGCAGGTAGAGGGAGGCCTCAGAAGATGCCAGACCTGCAGATTCCTGAATTTTGGATTCCTTGCTTCTAAAACTAGTATCTTCCTGACCCAGGAACCTAACCTGTGTCTCCTGTATTGCACACGGATTCTTTACCTGCTGAGCCATTGGGGAAGCCCTGACAAATAACACATCCTCCAACAGGCTACTTGATGCAAGGAAAATTGGAGTAAATGTTTTAATGGAAATATAGACTTCTGCTGTCTGTCTAATGTGCACAGTGTAACTTTTTTGAAAATATGCCATCGTGAAAAAAAAATCTGTAGTAAGAACTCTAAATACACTTCAGAAAAGATATATGGTAAAAACTTTAGTGAAATGAACAAATA TCONS_00217987 r 5' 635896 TCONS_00217987 r 5' 635896 EMBV3_27996 TGTTTGTATATGAACTTTACTCTTACCTGTGATCATGTTTCAGGAAGGAATGAAAGAGAG Gene GeneID:505123|CHD1:XM_002689414:62_cdna Constitutive 2 NULL GeneID:505123 7 GENE CHD1 NULL chromodomain helicase DNA binding protein 1 EMBV3_18262 TGTGGAAGGGTCCATCATTAGCAGCCCTCACATGCGCCGGAGAGCTACATCAACACGAGA Gene GeneID:521541|NUP210:XM_002697141:103_cdna Constitutive 0 NULL GeneID:521541 22 GENE NUP210 IQSEC1 nucleoporin 210kDa EMBV3_17112 CCCTTAGGAAAAATTGGTGCCCCTCTAGTCCTAATCCTTCTTGTCCACTCCATCTTGGGG Gene GeneID:508196|DENND4B:XM_002686018:421_cdna Constitutive 0 NULL GeneID:508196 3 GENE DENND4B NULL DENN/MADD domain containing 4B EMBV3_13114 ATGGATTAAGAGAAGGACCGATTGACTTAGGTACAGTGAAGGTGAAATTCGATTTAACTT Variant GeneID:282110|UCHL5:NM_174481:2_cdna 703^766 1 EMBV3_03776 GeneID:282110 16 GENE UCHL5 MGC127682 UCH37 ubiquitin carboxyl-terminal hydrolase L5 EMBV3_16097 TGCCTGGGAGGTTGTCAGAGCACAAGTCATGAGAGCCTTCTCTTCCTCAACCAACTTGCA Gene GeneID:510726|LOC510726:XM_002689555:46_cdna Constitutive 0 NULL GeneID:510726 8 GENE LOC510726 NULL similar to interferon alpha H EMBV3_33148 TTGCGCTAAATGAGCAACATGCCACAGAACAGTTTAAGGTCTCCAAGGACAAGCAGGCCC Gene GeneID:100336071|LOC100336071:XM_002695951:395_cdna Constitutive 0 NULL GeneID:100336071 19 GENE LOC100336071 NULL 60S ribosomal protein L36-like EMBV3_16322 CTTCGAGAGCAAGTTTAAGAAGGAGCCGGCCCTGACTGCAGGCAGGTTGTTGGGTTTCGA Gene GeneID:781665|IRF2BP2:XM_002698810:39_cdna UTR3_Alt 2 NULL GeneID:781665 28 GENE IRF2BP2 NULL interferon regulatory factor 2 binding protein 2 EMBV3_34403 ATCACTGTCAACACAGACCTCAGCACTATCGACCTGGTGGCCTTCCTGGGCTACAAGTAT Gene GeneID:617320|YIF1B:XM_002694967:121_cdna Constitutive 0 NULL GeneID:617320 18 GENE YIF1B NULL Yip1 interacting factor homolog B (S. cerevisiae) EMBV3_04545 AGCCTCCTAAAGGTGTGGACCAGGGAGCTCTGGAGCTAGCGACCAGCAAGATGGTGGACT Gene GeneID:518615|FIGNL2:XM_002687258:112_cdna Constitutive 0 NULL GeneID:518615 5 GENE FIGNL2 NULL fidgetin-like 2 EMBV3_07586 TTGCCCCAGCCACACCAGATTTCTTTCACTATTTCACACTCCAAAGACCCCTGTTCCAGC Gene BVT0102_044652 + 1 EMBV3_07523 GK000008.2:60332995-60368097 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225510 TCONS_00225513 TCONS_00225504 TCONS_00225516 TCONS_00225509 TCONS_00225505 TCONS_00225508 TCONS_00225514 TCONS_00225511 TCONS_00225506 TCONS_00225503 TCONS_00225507 TCONS_00225512 1 XLOC_137763 Coding TCONS_00225510 XLOC_137763 Coding Coding RGP1 8:60327756-60335113 j TSS168810 5091 1 TCONS_00225510_2 391 0.0394814378314673 10 0.309271343121262 0.00141307082203481 0.00107204410566373 0.000293336563696014 1.91098694702455e-35 1.75166505755621e-34 6.28295672328872e-05 0.000518609984572816 0.000745168095553902 0.000144009285487406 1.47026124416586e-22 0.000164841908768367 0.000107257648083618 6.06627315770541e-78 1.31530856943398e-12 4.65536533481087e-06 4.79912745477153e-06 3.74541904728878e-05 0.000379409500227562 6.66058029429602e-28 1.54253905347941e-159 3.98088006121855e-24 0.00047993044161141 0.000296366561114901 0.000106187250004311 0.00156141705071326 0.000306439627701193 5.76882124589925e-07 4.05975132958e-41 3.85644488217083e-05 3.24444301058019e-05 XM_005210116.1 RGP1 PREDICTED: Bos taurus RGP1 retrograde golgi transport homolog (S. cerevisiae) (RGP1), transcript variant X8, mRNA. 0.0 2590 100.00 0.281869966607739 NM_001080496.2 RGP1 Homo sapiens RGP1 retrograde golgi transport homolog (S. cerevisiae) (RGP1), mRNA. 0.0 2114 89.51 0.312315851502652 TCONS_00225510_2 sp|Q92546|RGP1_HUMAN RGP1_HUMAN Retrograde Golgi transport protein RGP1 homolog; 0.0 780 98.21 0.997442455242967 1 coding 0 1 1 1 0.123032844385629 0.355958273996831 0.0373149110164283 0.502991617987642 GAGCTGGTGTCTCCGTGCAACCAGGTAGCTGTTGCTGCTGCGGCGGCGGCGACAGCAATAAAGCCGCCACGGTCTCACCCTCGGTTGTCTCTCTGGGTCCTGGGCGGGAAGGATCGGGTCTCGACGTCATTGGGCCGCGGTGATTAGCTGGCCCGGCCAAAGGGCGACTGGGCCCACGGAGAGGGGAGGAGCCCCCGGGGCCGGCCCTCCAGGCACCGCCCCCGGGACCGGCCTGGGAGTTCGCCGCAGCCCAGGCCCCGTCCCCGGGCCGCGGCACCAGGCCCCCCAGCGGTGGGCGCCAGGTCCCGCCGGCCGGTGTCCGGGGCGGCGCCCGCGCCCGGGTACCAGCCCCTGGGAAGGTGACCCAGGGCGGCCGGCCCACCCAAGCCCCTTCCGGCCTAGCCAGCCCGGCGCTTCCGGCCGGAAGGGACTCGGAGGGAAGTCCCGCCTCTGCCGCGGCCGCAGCCACGCACTTGGCCCAGGCCCGGAGGGGCGGGCGGCCGAGGCCTTCGAGGCACCGGTGCCCGGTCAGCTGCCGCCGTACCTGCCTTCCGCCTTCCCGCACTCCAAACCTGGGCGCTTCCCTCTGACACCGTGATCCGATCCCGGAGCTGCCATGATTGAAGTGGTAGCAGAGCTGAGCAGAGGTCCTGTGTTTCTGGCAGGGGAGGCCCTGGAGTGTGTGGTTACAGTCACCAATCCCCTGCCCCCAACTGCCACTTCTGCATCCAGTGAGGCTCTGGCCTGGGCCAGTGCCCAAATCCACTGCCAGTTCCACGCCAGTGAGAGTCGAGTGGCACTTCCTCCCCCCGACTCCAGTCAGCCAGATGTCCAGCCTGAGAGCCAGACTGTCCTTCTTCCACACCGAGGTGAGAGAGGTCAATGTATCCTTTCCACTCCACCAAAAATCCTCTTCTGTGACCTGAGGCTAGACCCTGGAGAGTCCAAATCATACTCCTACAGCGAAGTGCTGCCTGTAGAGGGACCACCCTCGTTTCGGGGTCAGTCAGTCAAGTATGTCTACAAACTGACCATTGGCTGCCAGCGTGTCAACTCACCCATCACTTTACTGAGGGTCCCTCTGAGGGTTCTTGTGCTCACTGGCCTTCAAGATGTCCGGTTTCCCCAGGATGAGGCTGTAGCCCCATCCAGTCCATTCCTGGAGGAGGACGAAGGTGGGAAGAAGGATTCATGGCTCACCGAGCTGGCTGGGGAGCGCCTCATGGCTGCCACATCCTGCCGCAGCCTCCATCTGTACAACATCAGTGATGGCCGAGGAAAAGTTGGGACATTTGGCATCTTCAAATCTGTATACAGACTTGGCGAGGACGTGGTGGGGACCTTAAACTTAGGGGAAGGAACTGTAGCTTGTTTGCAGTTCTCAGTGAGCTTACAGACAGAGGAGCGTGTGCAGCCTGAGTACCAGCGGCGCCGCGGGGCAGGAGGTGCCCCCTCGGTGTCCCACATCACTCATGCCCGGCACCAGGAGTCCTGCCTACACACAACCAGAACCAGCTTCTCTCTCCCCATCCCTCTCAGTTCCACCCCAGGCTTCTGCACAGCCATTGTATCCTTGAAGTGGCGTTTGCATTTTGAGTTTGTCACCTCCCGAGAACCCGGTTTGGTGCTCCTACCTCCTGTGGAACAGCCTGAGCCCGCCACCTGGACGGGACCTGAGCAAGTGCCTGTGGACACCTTCAGCTGGGACCTGCCCATCAAGGTGCTGCCTACAAGCCCTACCCTGGCCTCCTACGCGGCCCCTGGCCCCAGCACCAGCACTATAACCATCTGAAACTGACCCACGTGGCACAGCCTTCTTCAGGATCCTGAGAACTCAGCCCCTGGGCTCTAGTAGGGCCCATTGTTCCCACCTGGGGTCCAGTGGCACAGATAATGAGAGACAGGCTTTCGGCTGGAGCGTTAACTTATTTATTCAGAATAAATCAGCAGCTGCTAGTGGTTTCCCTGGAAGTGGCAGCAGCAGTGGGCGGTCAGCAGAAGGGCAGTCAGTTGTGTTTAGCTGGAGTGGGGAGCAGGCGCCGCAGGCACAGGGGTGTTAGCTGAGCCCCACTCTGGGTCGGGCCCTCCCCCTTTGCAGGGCAGCCGAGGGTCAGATTTTTGCACGAGGGAGAACTGGCATGTTCCTGCCTCCTGGCGTACCTCACAGCCCGCAGGGAAGTCGATAGGATGCTGGGACCTGGGGAACCGAAGGATGGGGGAAGGGTCAAGACAGTGAAGGTCCACCTTTCTCCCTGCGCCTCATCCCCTCCCCAGCACTCCTCCCATGTCTCCCCAGTGCCCCCGGCCCTGCAGTATTTCTCTTGCCTGCCATATATGGATTTTTTTCATTTCATAGCAGGAGTACTTTCCCTCCAGATCCATCTAACTCCCCTCTCTCTGTAGCCTGAAGCCTCTCACACCTTCTTGTCGGTTCAGCCAGCCTCTTACTGCTACTCCGTTCGTTCTCACATCAGAGCAATCTAGTCACACCCTGGCCAGCTCTCAGTCCCTCATATCGGAGCCATTCTCTCTGGCCACCTTTGGTCACTCACGTATCACAGCAGCCCACACCGACCGGATGCAGACAGGTGCAGTGGAAGCAGTCCTTGCGGAGCCAAGACTCGCCCAGGGTGAAATATTTCCCCTCATAGTGGCAGGGGGCTGGGGAAGAACAGGAAATGTTAGAGCCAGAGTGGAGGAGTAAGGGCACGCTGCCCCTACGTGTGGTCTCTCCTCTGTCCCAGCTCCAGGGAGTCTGGGTTTGCTGCAACAGGACCACCTCTGAGCCCTTCCTCCCAGTGCCCTCTGCACCCATCCTTCCTTATGCCTCACCCAGTTTTACCTTGAGCCTGGAAGTAGCACTTGCTGTGGACTCCTGGGTGCTGGAGGAGCAGAGATACCACCAAGTAGATGACCCCCCAGCCTCCCCGAGTTCCCGCAGCCTGTCCCACCCAGGGTGTCCTTGGGGCCATTCCGGCAGCACAGCTCTTTCGGACCCTTCTTGGCTTCCGTTCAGGCTGCTCTGGCCTCGTCTTCCTTGGCTCTTCTCTGTTCCTCTCCTTGAGCCTTAGCTTCTGTCTCTCTCCCCTGGGCGCCTGTCTTACACCATCTCCGTGCCCTCTGTTCTCACAGGCTTGGGGATGTTTATAAAGTGAGGACCCTGGCCCCCTGCTGAGTGGAGCTGGAAAAGCCGTAACTCTGTTTCCTGAGGTGAGGGCATGAAAACAAGAGGTCTAGCTTTAACAAGCTGTGAGAGCTGATTCATGCCCCCGCACAGCCAGGGGGAGGAGGGTGGCCGGGGAAGGGGTACTGGACTGGGCACTTCCCCAGCAAGGAGGGGGTGGGGTGAGGGCCCCCAGGTGGTCCCCAGAACTCTCCCTGGCCTGGAGAGAAGGAAGCATTCCACCATCTCCCCCCGCCCCGTAATACACACACACACACACACACACACACACACTCTCTCCAGGGGTGTGTACGCTGGGATCCCTGCCTGGACCGGAGGGAGGCATTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGAGATGCAGTAGGGTGCGACGGCCAGAGGCTCCAGGAGAGCAAACAGGCACCTGGTGTGGAGGATGTTTCTCTCAGACCCCAGGGCAGGGTCTCCTTGCAGTGTCCTAGAGACATGGCTGCCCCTCAGAGGTTAGGGATGGGGGGCTGGGGGCAGGTGTCTCTTTTTTTTTACAGGCATCCCAGAGATAAGACTATCCATTGTTAATCACCCCAAACACACAGCAAATAAAAGATCTTGCCATATCTGGGAATGGTTCTTTTCAAAGAGGAACATCTCTAAGTGCCCTCACGGTATGGGTCATTCCAGTTTTCACAAGAGAGGCCCCTCTTTTCTCCTATGTTACGGAATGAGGATTTAGGAACGTATCCTCTGACATCCTCTTTTGGATTTCCTGTAGGTTGTGGAGAACCTGAAGAGAGGTGATTAAGAGCATAGGTTGTGGAGTCAGACTCTGGATTTAGATCCTAATTCTACTAAAAAGCTATGTGACATTGAGCAAGTTAGTTCACCTTTCTAAACCTGTTCCCTTATCTGTAAATTGGAATAGTGATACCAACTCATAAGACCATCAAGAGGATTCCATGAGATAATGCATGTCATGCTCCTAGCGCTGTGCCTGGCACATAGCCCTCTGGAAAGAGTAAACTGCTGTGGTCAGTGCTAGATGTTCCATTCTTTGAATGATGCAGAGGAGCCCTGTGTGCACGGCCCACAGCTTCTGTTGGGGCTGCTATAGATTTTTTTCACTTGCACACGTATGCTCCTTTCATCCTACTACTTCCTTCAAAAATTACCTCCAGGATGGTTTTGGTCCTTGTGTCTTTGAAACTCTAAATGTGCGCTTTGAGAACAGAGTTGCTGATCAGCCTCCTTTTCCTAGGTCAGAACCCTCACTTCTTCCCGGGAAGACATATCAAATCCTTCCAGCTAACTTTGGGACTCCTGCTTTTTCTCATAAGGTTTCTGAACCATTTCTTCCCATCCTCCTGTGAACTCTCAAGTTCTCCTTTCTGACAAGTCTAATGCTAGCCTTTGGTATTAATTGCCCCAGCCACACCAGATTTCTTTCACTATTTCACACTCCAAAGACCCCTGTTCCAGCTATCACTCTCCTACCAACAGGGTCAATCACTTTGGCACTTATTCTATTTTCCTTCTAAGTCTCCAGTGCCATTTACCCCTAGACTACCCCTCCCTGTAACCCAGTGGTTCCAATCCAACTACTTCTAGAGGACTACCCTCCCTCTCCCCTTGTCACCATTCAGAAACAGCTTCATCAGTCCTCCGAACTCCCTATCCTTTTCCAAGAAGACAGCTTACATGGCTGGAGATGAGGACTGTACCGCACCTTCACCCTAGTCAGGTCTGATATGCTTTCCATCTCAGGAGCAGCAAGAGGAAAAAAAAAATGGGAGCAGGGTGCCCTGATGTAGGCTGGCATGTGGGAGGCATGGCCTTGGAATTCTCTGGGCTGGAGCAGGTGGATTCAAAGGCTTGACCAACACAAGGGCCCAGAAATCCTGTCAGTGGCCAGTAGCTC EMBV3_08241 GGCTGAAGCTCCAATACTTTGGCCACTTGATGGGAAGAACTAACTCCTTAGAAAAGACCC Gene BVT0102_106965 + 0 NULL GK000006.2:110603525-111369902 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075943 TCONS_00204223 TCONS_00148664 TCONS_00204216 TCONS_00157719 TCONS_00204214 TCONS_00204215 TCONS_00204221 TCONS_00204225 TCONS_00204220 TCONS_00204222 TCONS_00204224 TCONS_00141499 TCONS_00222155 TCONS_00070901 TCONS_00204217 TCONS_00204218 TCONS_00153292 TCONS_00032063 TCONS_00210606 TCONS_00204219 10 XLOC_046688 XLOC_124373 XLOC_090544 XLOC_096174 XLOC_085927 XLOC_135464 XLOC_042678 XLOC_093056 XLOC_018308 XLOC_129116 Coding TCONS_00204221 XLOC_124373 NonCoding NonCoding - 6:111233521-111237914 - TSS152809 851 1 TCONS_00204221_2 64 0.411280846063455 4 0.807149362477231 0.00136880939786342 1.71127146432626e-09 0.00174038495892423 0.000429127949577287 0.000520475841236177 1.89265671397727e-11 0.00141983791431102 1.80187326711132e-06 0.00105522749271783 4.58610697816683e-46 0 0 4.04457740592603e-22 9.25285341445828e-14 5.31726415747357e-05 0 0 0 0.00115145263121531 0.00140667782205212 1.2533499372681e-14 0 0 0 0.00122540103958458 0.000567868368786128 0.000802851883889906 0 1.13951504756612e-05 0 NM_001102188.1 SGCB Bos taurus sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA. 3e-88 329 79.89 0.410105757931845 0 noncoding 0 0 1 0 -1.68284031497706 0.00277086800565582 -0.177344929885228 0.0231932137812629 GAAGAGGAACAACAGCCAGGCAACCAGGACCCTGATTAAATATCTCCTGAGGGCCCTGGAGAGCCTGTGAAACGATCTCCCAGCCCCAGAAGGAGATCCTGGCACCAACAGGACCTGAGCTGAAAAATCAAAAGGTGCGGAATATAATCCAATAACAGATCCAGCTTAGAAATCTCAACAGGTAATGAGACTCACATCAACAAGAGCTGAATTCTATCCCAAAAGAATGCTGTGTGCATAATGTATGAAGTTTTCAGAAAAACAGTCTTGAACAGACAATTCGTCTGACCTTGGATAAACCAGCGATGAAAGGCACTACAACTCCCATTTGCTGCCCATGGAAGTACTTGATCCATTCTGCTCCTTAAGCTGAAAATCCTACTTGGTCCAGGGACTCACTCCCCTGTGCTTCAGGGACTGATGGAGCTAAAACCGCCACCCTTTCCTGGCACTCAATCACAGAAAATTCTTGATAGACCCTTGAACTGCAAGGGGATCCAGTCAGTCAATCCTAAAGGAAATCAGTCCTGAATTGGAAAGACTGAGGCTGAAGCTCCAATACTTTGGCCACTTGATGGGAAGAACTAACTCCTTAGAAAAGACCCGATGCTGGGAAAGACCAAAGGCAAGAAGAGAAGGAGACAACAGAGAATAAGATGGTTGAATGGCATCACCGACTCGATGGACATGAGTGTGAGTAAGCTCTGGGAATCTCTGGGAGTTGGTGATGGACAGGGAAGCCTAGCATGCTGCAGTCCATGGGATTGCAAAGAGCCGGGCATGAGTGAGCAACTGAGCTGACCTGAACTGAACTGAATAAATTAATTATACCAATTAATAAATAATTATAG TCONS_00206301 r 3' 131989 TCONS_00206301 r 3' 136381 EMBV3_27078 GCAGAAATACGGCTCCCTGGTTAAGGGTGTGTATCTATCTTCCTCTCAATTTTAAATGTG Gene BVV0102_305716 - 1 EMBV3_23021 GK000003.2:60449088-61169974 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27293 AGTTTGCAGCGTGTACTTAATTTCTGCTTACACTCTTTCCCCACCTCTGCCCCCCTAGAC Gene BVV0102_257630 + 0 NULL GK000019.2:39401004-39409894 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34428 TTACTGGTGTGGTTGGGGAGTTCAGGGGATGTGGGCGGTTAAGAAGGGATTGGGCTTTTT Gene GeneID:512150|LOC512150:NM_001104975:34_cdna Constitutive 0 NULL GeneID:512150 18 GENE LOC512150 NULL similar to Myeloid-associated differentiation marker EMBV3_03689 AAAGATCACCAACACCGATGTGGATTGCCTCAAAGCCTGCCAGGAGCAGATTGAGGTGGT Gene GeneID:615414|CCND2:NM_001076372:46_cdna Constitutive 0 NULL GeneID:615414 5 GENE CCND2 MGC142404 cyclin D2 EMBV3_23441 GGCGCTGCTTCTCATTCATTTTAAAGCTTCTCCGAGTTGTGCTCATTCCAAACTAACCCG Gene BVT0102_028647 + 1 EMBV3_03573 GK000030.2:16257204-16396808 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246403 TCONS_00246402 TCONS_00246404 1 XLOC_150970 Coding TCONS_00246402 XLOC_150970 Coding Coding HS6ST2 X:16394566-16398853 j TSS184726 3199 1 TCONS_00246402_2 236 2 0.254083061129258 5.56896055934937e-06 2.61715018607147e-06 2.89275303524456e-05 2.59551102513225e-06 4.02812706382549e-05 6.33618753586575e-06 2.37604858042983e-05 3.49988992574704e-43 5.87832144257718e-05 1.09282925696119e-05 0.000231043657914301 0.000148562974615022 9.86621038173943e-06 2.20548390066826e-06 1.3267588852814e-06 0.000246976673369707 1.72923855676118e-06 6.30629329592325e-21 2.46574782395866e-05 1.3110076412048e-06 3.16184310440099e-07 4.68572292271769e-05 7.4798999673288e-06 0.000234504962050805 2.81530882448995e-06 0.000151965091709756 4.02940439475769e-05 5.1043107357675e-05 2.77636378780786e-209 7.50318221746259e-13 NM_001206635.1 HS6ST2 Bos taurus heparan sulfate 6-O-sulfotransferase 2 (HS6ST2), mRNA. 0.0 5669 100.00 0.982181931853704 NM_147175.3 HS6ST2 Homo sapiens heparan sulfate 6-O-sulfotransferase 2 (HS6ST2), 0.0 3456 84.48 0.982181931853704 TCONS_00246402_2 sp|Q96MM7|H6ST2_HUMAN H6ST2_HUMAN Heparan-sulfate 6-O-sulfotransferase 2; 1e-123 368 86.44 0.995762711864407 1 coding 0 0 0 0 -0.0237506598778505 0.854391468178876 0.0397244003580342 0.617958542468793 GTGCTTGACTTGGTTCCATCTGGCTCCTCACTCCTGGGTGCAGAAGCAGCATCCCTCAGGAACTTCCACTATATCACCATCCTCCGAGACCCAGTGTCCCGGTACCTGAGTGAGTGGAGGCATGTCCAGAGAGGGGCAACATGGAAAGCGTCCCTCCACGTCTGCGATGGCAGGCCCCCAACTTCTGAAGAGCTGCCCAGCTGCTACACTGGAGACGACTGGTCTGGCTGCCCCCTGAAAGAGTTCATGGACTGTCCCTACAACCTAGCCAACAACCGCCAGGTGCGCATGCTGTCCGACCTCACACTCGTTGGCTGCTACAACCTGTCAGTCATGCCTGAAAAGCAGAGGAACAAGGTCCTCCTGGAAAGTGCCAAATCGAATCTGAAGCACATGGCATTCTTCGGCCTCACTGAGTTTCAGCGGAAGACCCAGTATCTGTTTGAGAAAACCTTCAACATGAACTTTATTTCTCCCTTTACCCAGTATAACACCACTAGGGCCTCTAGCGTAGAAATCAATGACGAACTCCAAAAACGTATTGAGGGACTGAATTTTCTGGATATGGAATTGTACAGCTATGCAAAAGATCTCTTTTTGCAAAGGTATCAGTTTATGAGGCAGAAGGAGCATCAGGAAGCTAGACGGAAGCGTCAGGAACAACGCAAATTTCTGAAGGGAAGGTTCCTTCAGACCCATTACCAGACCCAGAGTCAGGGCCAGAACCCAAATCCGAGTCAGAATCCGAGTCAGAACCCAAACCTGAATGCTAGTCAGAGTGGGACTCAGAATCTGTTTCAGAATCTGATTCAGAATCTGACTCAGAGCTCGGGTCAGAATCCAAGTCCAAAGGAGAACCAGGAAAGCCAGAAGCAGAATTCAGGCCAAGAGCAGAGCGATGGCAACACCAGCAATGGCACCCATGACTATATAGGCAGCGTAGAGAAATGGCGCTAAGTGGCTCCCAAAAGCTTTCACACACTTCTCCCAAAGCGCCAGTCAAAATAGGGCAAATCCTCAAACATGAGAGCGTCCAAACACATTCTGCTTCCTAAAGTTTGGAAGTTCAAAAAAGTTAAGATGTCGCCTTTACAGTTGCCTTTCAATTCAGTGTTCTACTGTGCGTGGGTAAAACAAATTTCAATATGTAATTAAATTGCCTTTTTTTTTTTTTTTTGGTTTGTTGGAGTATTTATAAAATCCAAAAGCCAAACCAGACTCACCAGAAATTGCTGTTTAGATATTTTAAGAAGTTCTTAAATTAGTCATAGGGACAAAGTGGAAACATAAAATGTGGCCATTTAACTTATGCCTAAGAAATGGACTTTACATTATTCATGACACACTGTTGAAACCCAATCTTGGAAGCAAACATTTTTTTCCAGGGGTAAGCATGAATATAACATAAAACAAACTAAACACAAAACTTCATTTTCTTCTGATTATAACCAAGAATCTATTTAAATAAAATAAGAACTGATGGTAGAGTTTACCAAATAGTAGAAAATGGAAAACTTCTCTCCCAAACATGAGTAGTTTTATGTAAAAATATTGGCTTTTGAGTAGAAAGGGACTCATCTTGTTATTTGAGATGTTTAAAATTTTAAACTTTTTCTACCTTCTGCTATTTAAAGGTTTTAAACAGGGTGTATCTCATACTAAACCAAACACTTTTTCCAAATGGAGTACCAATGTAAAGATCTAATTTCCAGACGATTTCTGGGCACTGTAATTTCAACAATTCTGGAATCTTTTTGGCGCTGCTTCTCATTCATTTTAAAGCTTCTCCGAGTTGTGCTCATTCCAAACTAACCCGTTTTAGAATCTCTCTTCATCATCTAAATGGTGTGTTGCTGAATTTATTGTGATATATAATCCTGGATTAAAGTCAGGACTTTCTTTCTATAGAATTGTCTTATCAATGTTTGTGTAGTGAGATCCTTATCAAGAAACTCTTGAACAGGATAGCGTGTCTTAAAATATTGCTGAAGTTAGTATTCTGTTCTTGATCAGATAGAATTGAACCTGAATGTGAATGAATCGTTATTTACTTTTTGTACATTTTTATTGTAATGTTTCCAGTTGGGCTGTCTCTTTCTAGCCCATTAGTTCTTTTTCATGTTGACAGAGTGTAGACAATTACTAGAGAAAAACAAGGTTGGAATAAGCACTAGGATAGCCAATGTTATTCAGTAACACCAAAAGCTTTACCTCGATACTTTGGGTGAGCCGTGTACCAGCTTTAGTTTTGAGAAAAGAAAAGGCAAAAGTATTCTGCAGTGAGGTTAAACATCAGAAGCATATGGGTTGAAGAAAGTGATTTGGTATTGGAAGTCTGTGCAAAAATACTTTCAGGGTATCAAGTTTGAATTGCACGGGCCAAAAAGAAGTATATAACCCACTGTGCTAGCAAACATCCTGATTCTGGGCAGCTTCCATATTACGGGTTGTGCTATCCTTTCGTAAGGACTTACACTAAGCCTCTGGCTGTAAAGCAGAAAGGCAACTGCAAGTGGCTTTTATGTTTTCATGAGGGACATGCTTAGAAATGTGACCATAAAGTCACATCTTGTACAATCTGCTCATTTGCATGATCTAGTTTCATCTGTAATAATAAGGCCACAAACTGGACAAGAAGCTGAGTACTTGGGTTAAAAAATGTTTTTGACTCTGCGCTTGTATCAGTAGATCTAAATTTTGTTTTGCCTGACAGTATCGCAGTCCTGGGAATCTGAGAACTGGAAAACTGAAAGGAAAAAAATTTTCAAAATCCAAAATACCTTAAAGTCAAACTGTTTTAGAGTGAAACTATTTTGTGTACTTTGTGTTTTTAAACTAATGATTCTGTAGATCACTGTGGTATTTCAGTTTCATTTTGTTTTAATGGATGATGTTTGCTCTTAAAGCTGATAGGTACTGTTGGAAAGAAGGATGAAGCCCGAGCCAGTGGAAAAGCTTGTTACAGAAAAAAATATTTTGTGTTATTGCTGTGGTGTGCATGGTTTGCAGAGATTAAGTGCAGTTTCTCGGTCTATACTGATTTATTGTATATAGGGGATGTTATAAATATACATTTTGGTCATCATCATGTAAATCCCATGACTTCAACTGTAAACATCTGTCCAATGATGTAGCTTTACAAACCATTTACTGATTTTGTGTAATTTAACAATAGATATAAAATAAAGTTTAAATTACA EMBV3_18824 AAGAAGGCGCCCAAGAGTCCAGCGAAGGCCAAAGCGGTGAAACCCAAGGCGGCTAAACCA Gene GeneID:617854|LOC617854:XM_002697518:239_cdna Constitutive 0 NULL GeneID:617854 23 GENE LOC617854 NULL similar to Histone H1.4 (Histone H1b) EMBV3_06825 TAACAAGTCAGGACCCAGTCAAACTCCCCAGTGTTAATAGCTTGCTCAGGGAGACTGTCC Gene BVV0102_117797 + 0 NULL GK000007.2:3941571-3947068 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12396 ACTGACAAGGGGGTATTGGGGTTATTTTCTGGTGGGACTAGCATGTCACTAAAGCAGGCC Gene GeneID:100299139|LOC100299139:XM_002697754:272_cdna Constitutive 0 NULL GeneID:100299139 24 GENE LOC100299139 NULL similar to glutamine synthetase EMBV3_05842 GGCAGAACACTTCCTGACATAAATTGCAGCAAGACCTTTTCTGATCCACCTCCTAGAGTA Gene BVT0102_339112 - 1 EMBV3_14031 GK000007.2:83110765-83210509 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21550 GGAAGATCGTGCAGAGCTTTATTTTAAATCCTAGGGGAACTGTATCCGAGATGGGAGCTC Gene GeneID:511451|CAB39:NM_001046087:94_cdna Constitutive 2 NULL GeneID:511451 2 GENE CAB39 MGC137705 calcium binding protein 39 EMBV3_11618 GAGATCTGTGCCTCGTTCACGTCCTAAGTGGAAGTTTTAGTTTGTAACTGTTGTTCACGC Gene GeneID:514720|OSMR:NM_001080272:21_cdna Constitutive 0 NULL GeneID:514720 20 GENE OSMR MGC140467 oncostatin M receptor EMBV3_18834 GGTACATAGGCTTCTATTACCTATTAGGTGGAGATTTTATATGTAAATGTGTTAGCACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16044 GCTTCTGTTGGACACACGTACCCAGCAATATCAGTTGTAAGCACAGACGATGATCTAGCC Gene GeneID:282123|vldlr:NM_174489:2_cdna Constitutive 0 NULL GeneID:282123 8 GENE vldlr NULL very low density lipoprotein receptor EMBV3_11678 GAACTCTTCAGATACTGCACCCTCCCTGAGGAAAGAAGACATCCCGTCATCCCTTGCACC Variant GeneID:281400|PHYH:NM_174142:52_cdna 429^510 1 EMBV3_27992 GeneID:281400 13 GENE PHYH NULL phytanoyl-CoA 2-hydroxylase EMBV3_42551 AAGCCACAGAATATCTTCAGCCAAATCCAGGCAGTGCATTGATAGAAGTTGGTGAATCCA Variant GeneID:520311|SH3GL3:XM_002696595:60_cdna 154^297 2 EMBV3_37796 GeneID:520311 21 GENE SH3GL3 NULL SH3-domain GRB2-like 3 EMBV3_03843 TCCTTGTTAGACTACTGATTTAAAGAGAGAAAAAAGCCAACTCTGTAGACACCTTCAGAG Gene GeneID:537619|KTN1:NM_001102205:95_cdna Constitutive 0 NULL GeneID:537619 10 GENE KTN1 MGC165832 kinectin 1 (kinesin receptor) EMBV3_38308 CATCTCCAATCCTTGTGTCTCACGTGCTCGGTGTGGACCTTGCAACACCTTTGTGCACTA Gene GeneID:539597|KRT31:NM_001099099:192_cdna Constitutive 0 NULL GeneID:539597 19 GENE KRT31 KRT33A MGC159957 keratin 31 EMBV3_34448 TCTGCTCTTTTCCTGGTGCTCTTTTTGTCGGTGGGGTGTGGGTAATAGAACAGCCATAGG Gene GeneID:515187|CTNND1:XM_002693586:52_cdna UTR3_Alt 4 NULL GeneID:515187 15 GENE CTNND1 NULL catenin (cadherin-associated protein), delta 1 EMBV3_08886 TGTCGCGGCCTGGAGCTCATTGCTTCAGAGATACTACGGAGGAGCAGAGGTAGTGGATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14865 CACTGAATACAACCCAACCCAAGGAGTGAGCACCACCCTTGAACAAGCTGAAGCTGGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41641 CTACAGGAGTAAGCTGCTGCATCTCCAACTGAGAACAGAAATAAGGGGGGAGGACGTCTT Gene BVT0102_344118 - 1 EMBV3_28037 GK000008.2:20028570-20315339 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224585 TCONS_00224588 TCONS_00224590 TCONS_00224591 TCONS_00224589 TCONS_00224587 TCONS_00224586 1 XLOC_137561 Coding TCONS_00224590 XLOC_137561 Coding Coding LOC100296271 8:20313518-20437897 j TSS168368 1018 1 TCONS_00224590_1 146 0.0265225933202358 4 0.991847432825741 0.0301158908280145 0.0245986094260749 0.0239822312238004 0.016616741706712 0.0232783344587763 0.00804985537254662 0.0151417204004582 0.0174018154106768 0.0247707881188282 0.00270361948253808 0.00074910165104923 0.00092710169571267 0.0039127127136693 0.00536201753947423 0.00819078971826656 5.3461010432245e-05 0 0 0.0204245123421369 0.0221782521073318 0.00975700078169487 7.10235628493556e-98 0.000868532799583733 4.40113617967239e-05 0.0246143209714182 0.0204636574203521 0.0140713104710391 0.000401621485947571 0.000990603663680298 0.00018778930017007 XM_003582512.2 LOC100851964 PREDICTED: Bos taurus uncharacterized LOC100851964 (LOC100851964), 2e-180 636 100.00 0.344793713163065 XM_005251394.1 ELAVL2 PREDICTED: Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (ELAVL2), transcript variant X5, 0.0 1510 97.87 0.87426326129666 TCONS_00224590_1 sp|Q12926|ELAV2_HUMAN ELAV2_HUMAN ELAV-like protein 2; 2e-73 228 100.00 0.753424657534247 3 coding ATACTTCCGCGCGTGCTGCTTGGGATAGGAGCCTGGCAGAGCAGCTGCACACACGGCAGTGCGGAGGCAGAGAAGGGGTTGGTGATACCGTGCTATAAATCTGTGGTCCAGTCCACCTCCCTTTTAAGACGTCCTCCCCCCTTATTTCTGTTCTCAGTTAGAGATGCAGCAGCTTACTCCTGTAGCGACCTACTAAAAAGCAACAAGGAGAAAGACATCGTCTTTTTGAAAAAACGTTCTTTCGTCTCTTTCTTTGTTCCTTCGTTTGTTTTTCTTGCCCCTTTTTGTTTAGTTGAAAGGCAATAGGAGGGTAGTCTCTCCGTCTTTTTAAACTCTCTTTTTTAAGTTTCCCCTCCCCTTTCATATTTTTTTTTCGCCATTTCTTTTAGCGTTGGACTTTGGGGTCGAAAGCATTTCTTTTTATTTGCTTCTTTTAAGCCGAGCACAGTTTAGGTTTCGTGCTGTCTTAAGAGAACTATCCAGCAGCTTCTTGCTCATCCTTATTGGGAGAACTGCACCGTTACTTTAAAAACACACATACACAAAAACCTTAAGGGAGAAAGCAGGTAATTGCTGCCATGGAAACACAACTGTCTAATGGGCCAACTTGCAATAACACAGCCAACGGTCCAACCACCATAAACAACAACTGCTCGTCACCAGTTGACTCCGGGAACACAGAGGACAGCAAGACCAACTTAATAGTCAACTACCTTCCTCAGAACATGACACAGGAGGAACTAAAGAGTCTTTTTGGGAGCATCGGTGAGATAGAGTCCTGTAAGCTTGTAAGAGACAAAATAACAGGGCAGAGCTTGGGATATGGCTTTGTGAACTACATTGACCCTAAGGATGCAGAGAAAGCTATCAACACCCTGAATGGATTGAGACTTCAAACCAAAACAATAAAAGACAAGTGCACTGATAAACTGGTTACTATTATGTGGTATTATGGCAAGAAAACTGGACAAGGAGACAAGGACAAGGGTTTCAGTTCAGTCCAGTCGCTCAGTCATGT EMBV3_12285 TTCTAGCTTAGAGCCACACTCTATTCTTCCATCTGGTCTAGTGAGCATCCTTCGAGGGAG Gene BVV0102_383893 + 1 EMBV3_37380 GK000016.2:22478780-22495735 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071642 1 XLOC_043412 NonCoding TCONS_00071642 XLOC_043412 NonCoding NonCoding - 16:22480842-22484970 - TSS53486 4128 1 TCONS_00071642_3 112 0.133236434108527 1 0 0 0 0 0 0 0 0 1.7910386662534e-07 0 6.97709987775489e-05 0.000291139133276771 4.33103200467759e-06 1.39015683531329e-06 0 0 0.00118365694401999 0.000422295456104941 0.00010940790090129 0 1.74210956518428e-06 7.35399354718092e-07 0.000221110189417546 0.000822287132343921 0.000503589635490203 0 4.26688439040288e-05 1.84517938946212e-05 0.000241990666841633 0.00014523838392668 5.24324285054858e-05 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 3e-47 196 82.44 0.0484496124031008 NM_016052.3 RRP15 Homo sapiens ribosomal RNA processing 15 homolog (S. cerevisiae) (RRP15), mRNA. 0.0 652 75.36 0.245397286821705 0 noncoding GCTAGGGAGAATATTCTCAGTATTAGCATAGTTTAGAATTACTTGTTTTTTTGTTTTTAGGCTTTGCAATCTCATGAAGTTATAGACTGACAGTAACTTAGAATCATTACAGTAGTTTAGTACTTTAAAATACTGAATTTTTTAAGTTACTTAGACTTCGACTAGATCAGGTATTATTCTACTCATTACAAAAATATATCTGGGAAATACGTTGGATGGACTAGTCTGAAGGCTCACTGTCAGTACTTATAACCTGAAATGGCTCTGCAGGAAGTTGCAGAATATTGGTTGACGGGAAAGTCCAGTCCTTCTATAATAAGTGGGTGGAGGGAATGTTTAAATTGTGGAAAACCGCTTAGGACTTTTCAGTCACTGTGTTTTTGCACATGTGAACGTACTTACTATTCAGCGGCTACCAACTAACCTAGTCTGTAGCCGCCCATGCTGGTCTTGAGGGCCATGAAGAACTGAACCATGAGGCCATCTAATTACAGTTTATAGACACCCAAAGATGCCCCTGTCAAACATACAACAGCAGAGAAGTCCTGAGGTTGACGTGTGAGCAGGAGCATGGACAAACTGAAGACAAACGGTGTTGCTGAGGGGTGAAAGGAGTAATAAGGAAACGCCTGCAGAAGACTTCATAAGACTTAAATATTTATTTAAAAGAGATAAGAGGAGCTCAAATAAGTTGACACTTTGGCGTCTTCTGCATAATTTTTTTCCTCTTTCTATATATATTTTCCTCTATCTCTCTATATACTTATTTTTGTTACAGATTTTTATGAATATATGTGTTGAAGGAGTCATAAGTGAAATGGGATGGGAGTTTTATTTTTTCAGTCTTTTTAAATGCCCACAGAGGACCATTAGTATGCTTAGTATATTATTATTAATACATTCATGCCACATGAATCTCACTTTTAAAACAAACATTTGAAGAAATCAGTAAGTATTTTTTGATATTTGTAATTTCTTAAGGAAGTGTGTGTGTGTGTTGGGGGGGATGGAGTGTGTGTCTTAATCCAGGCTGCTACATCAGATACCGTAGACTGGGTGGCAAAAACAACAAACAGTTATTTCGTGGTTCTGGAGGTTGGAAAGTCCAGGATCAAGGTGCTGGCAGATCTGATGTCTGATGAGCACCCTCCTCCTGGTTTGTCAACAGCTGACCACTTGCTGTGTCTTTACTTGAGGGAGAGAGATTGTCTTTCTCAGTGTTTCTTACAAGGGCACCTCCCTCATGACCCTGTTAGTTACCTTCTAAAGGACTCCACCTCCGATATTATCATATCAGGAATAGAGAGCTTCAACATAGGAATTGGAAAATGCATTGTGGGGGAAGATACAAAATTCCAGTCCATAGCAATGTATAAAATAGCAAACGGTACATTTGTACATAGACATGAAAGAACTTTAGCTGCCCTTGTTCTTCTTAACTTAAATTTTCTAATATTTAAATTTCAATAGAATTAGAAAGTTAAGTTTATCTGGCATTAATTGAGTACCTGTTCCAAGAACTGTGCTAGAATTATTTGAGTGATGATATTGTTTATGCAAAATAAGGAATAATTTTACTCCTGTAAAAAAAAATCAAACCTCCTCTTCCTTTCTAAAGTTGACTTCCTGTAGTAAGTGCCCACTGTGTGATTTGAATCTTGCCGCAGTTTGGATTACCAGTGATAACTTGAAATAAATCAGTTACCTACCATGACTTAAAAAATACTTGTTAAAAAAATAACCTTTTAAAGATTATAGTGGATGTTTCACAGATTAAAGATTCAGATTAAATTGCACATTAAAAGTCTATTACAGTAGAATTGAACAATAACTGTACAGAAACAGAGAGTCCTGGAATAACGAAGCATGTCTGTACTAAATAGATTAGGTCTGTAAATAGATTAATTTGTCAGTACACTATTGATGTTAAGTTCATTTTTACTTGGAAACAATTTTCAGTTGAGGGAAGCAGAGTTCATAACTGCTCTTTCCTTAAATTCATCTGTTAAGATCAATGGGACTAGTGTTTATCTCCACTCCGTGCATCAGTGATAGGTAGAGAGTCTGTTAAGCTCTGCAGAAACAGTATGAAGACTGTTTGAGGTGAATTGGCAGTTAGAACAAATTTTGGAAATAGAGAGGACGCATCCTTGCCTACAGAAAGGAATCTGTGATTTTGGGCCAGCTGGATAGATGAATCTTAACTACTTCAGTGAAGTTAGGCCCCTAGTGAATTTTTCCTTTGGGTGTGCTTTTCTGAAACTTGACTAAAAATGTCAATCATGAGGGGCTTCCCAGGTGGTGCTAGTGGTGAGGAATCCACCTGCCGATGCAGGAGACGCAAGAAATGTGGATTTGATTCCCTGGGTTGGTAGGGTCCCCTGGTGGAGGAAATGGCAACTGCAGTATTCTTAGCTGAAGAATTCCATGGATGAGAGGAGCCTGGTGGGCTACAGTCTGTGGGGGTCACAAAGAGTTAGACATGACAGCGCACACACCCATCATCTATAAAACTGATGCTTCAAAAATAAGTCATAAGAATCCTTGAACACATTGGCAAGTAAAACTGTGTCTGAGATAGGTGACAAGATGTTTAGAATAATGACTGGTGGCAAGTCCTAAGAGTTGTAATGAACTAATCCAAACTCTGTAGATTGAAAAGATATCTTCCAGCAATTCTTAAACAATTTTAGGTCCTCTAAAGGATGTTTTCTAGCTTAGAGCCACACACTATTCTTCCATCTGGTCTAGTGAGCATCCTTCGAGGGAGTTTTGACTTCAGGCTTTTTATGGAGGTGTGTGAAGAACCTTCTGTACTCAGATGAGTTGTACTCAGAGACAGAGTTACAAAGTATGTTTTGTTAACAATATCTGGCCCAACATTGCTCACCTCACTCACTCCCCCAACCCCACTATAGCAGGAGTATGTATTTCTGTTAATGCTGTTTGGTTTTCATTGAGTCGTTGAACAAGAGTATATGCTAGAGAAGTGGGTTTAATTTCTTACAGTCGTAGTCCCTCCATCAGTACTGCCCAGTAGCACTTTGTGTGGTGATGGGAGTGTATCTCCATTGCCCAATGTGGGAGTCCAAGTGGCTGTTGAGCATCTCTTTATTTAAAAGCTGCGTGTGGCTAGTGGTAATATGTCTATCTGTGAACAGATTAAAGTTCCAGAGCATATATTTAGTCTAATAAAACATCAGCCAATTTTGGAATCATCAGTCTACTTTGAATTCTCCCATAAACTTTGATAGATACAATCTATGTACATACAAATACTGGTGTGATTTTATTGACTAAGTTATGGTTGATGTCTTTTTCACTACTTGTATTTTTTAAAGAGATGTGTTAAGTTGCTTTGTAATTACTTCCTGAGGTGTAACTATTATCCTTACATGTTAGGCCACTGTGCGTACCAAACAGTATGTGAGCTTTTAGTATTATCACCTGTGGCTTTCAGAATGAACACACTGAACTTGAAGTCTCGTGGCTGTGTGCTGAAAGAAGAGGTGTTAGGTGTGTGGTACGCAAAAAAGGACATACTGAGAACTGCAGGAGCAGTGGGTAGCGGGTACCATCTAAGCCAGTGTTCCAGTGCTGGGGACTTTGGTCAGGAGCCTCCTTAGTTTGGGGGTCTCCGGAGGAAGTGCCTTCCGTGGCAGGGCTCCCGCGGTGTCCGGCAGCTCTGATCTGCGCCAGCACACACTTGACATCCTGCCCGAGCAAATGTAGCTTGCAGATTGGGGCAAAAAAAAAAAACAAAAAAAAACAACAGAAAACAAAGTACACCATGAGCATTATTAGCACAGCCAGTTTAAAATGATGAGGTGTTAACCACATTTGTATAAATAACAGTTTCTCTAACCCCTGAATCATTATCCTGCATCTTTAATGCAATCGGTTCATAAACAACAAAGCAGGAACACCAAATTTGTGTGGGGTCAGGACCAACTGGGGCTCTGAATGGAGAGACAGCTGAGAGTGTGTCCTTTGCGTGGGTGGCCTCGCAGCTGTTGATTCACCCCGGAGCTACTAGACAGTTGCCTCTGCGCACTCACAGAACCAGCTTCAGTCTTAGGTAAAAATGGATCCCCTCCCCTGGGATGGACATAAACAATGGGTTGACAT TCONS_00066818 TCONS_00066825 . 3' 379 TCONS_00066818 TCONS_00066825 . 3' 4506 EMBV3_36854 TTCCCTGGTAGTCCAGTGGCTAAGACTTCATGCTCCCAACGGTGCTGAGGACATGGGTTT Gene BVT0102_003873 + 0 NULL GK000006.2:18854671-19381412 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33435 CTTGTGCCACGAGTGGAGAAGCCTGTGCGCCACATCAAAGACCCAAAACCACCAGAAAAG Gene BVV0102_085609 - 1 EMBV3_24009 GK000012.2:55049534-55591838 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08833 CAAAAGCCTCAGGATGCGGGGAGAGTAACAGCAAGTGCCAGTCCAGAGGAAACAGGATAA Gene GeneID:614655|LOC614655:XM_002687946:27_cdna Constitutive 0 NULL GeneID:614655 5 GENE LOC614655 NULL similar to DNA segment, Chr 15, Wayne State University 75, expressed EMBV3_06416 CTGGACCCCCAAACTGCTGATCCCAGGGTAGCAAGACCCTCTTCTGGGAATCCTTTAGTA Gene GeneID:539186|GPR156:XM_002684786:125_cdna Constitutive 0 NULL GeneID:539186 1 GENE GPR156 NULL G protein-coupled receptor 156 EMBV3_08384 TCAACAGGACTCTCTCCAGCAGCCATGAGGGGACTATACTGGTTGTCCACAGGTGAACTT Gene BVT0102_073632 - 0 NULL GK000011.2:43640304-43693195 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027715 TCONS_00027713 TCONS_00027714 1 XLOC_015309 Coding TCONS_00027714 XLOC_015309 Coding Coding LOC100847902 11:43673878-43681310 = TSS19581 748 1 TCONS_00027714_1 242 5 0.900013457139012 0.00114588384676809 0.00100752061647308 0.000544278850239301 0.000577287611908664 0.00058744057228631 0.000325183887561356 0.000483372047969227 0.00141541642719053 0.000348087485046435 1.09226793163459e-05 1.18089616901225e-06 1.92208764853996e-06 4.9865281797692e-05 0.000716915595083973 4.59108175076626e-05 0.000426133942367308 0 0 0.000306632014698174 0.000365025832418724 0 0 3.92703206667834e-05 5.68701338368314e-06 0.000453771463986753 0.00010353155366526 0.000509105110911521 0 2.11804087711688e-06 2.03976313309655e-06 XM_003586633.2 LOC100847902 PREDICTED: Bos taurus uncharacterized LOC100847902 (LOC100847902), 0.0 1243 100.00 0.919786096256685 NM_032506.2 KIAA1841 Homo sapiens KIAA1841 (KIAA1841), transcript variant 2, mRNA. 0.0 1052 94.27 0.909090909090909 TCONS_00027714_1 sp|Q6NSI8|K1841_HUMAN K1841_HUMAN Uncharacterized protein KIAA1841; 9e-144 424 95.07 0.917355371900826 1 coding 0 0 0 0 0.0625441639739979 0.557968651882968 0.0238734875083162 0.657102356427385 CTATTTCTAGTTCCAAAAGATGAGTCGTGGATATTCAGAAAACAACAATTTCCTAAATAATAACAACCAGATGGTATTGGACATGATCCTTTACCCATTAATTGGAATCCACCAGACCATCAATTGGGAAACTGTGGCAAGGCTTGTGCCTGGATTAACACCCAAAGAGTGTGCAAAGAGGTTTGATGAGCTGAAGAGCAGTGGAAGTTCACCTGTGGACAACCAGTATAGTCCCCTCATGGCTGCTGGAGAGAGTCCTGTTGAAACTTTAGCCACATACATCAAATCCTCTCTTCTTGACACACAAGGAGAATTTCAGGAGACTCCAGTTGGTCAGGATGCAGTTTCTAAAACAGGAAGACATAGTATAGCTTCCACAAGGAATTGTTCTTCAGAAAGTGAAAATTGTACTACTCATAATGGTGGAGAAAAGACTGAAGAATCTGAAGGGCCAAACATGGTGATCCATGTATGTGATGAAGCAAAAAACTTGAAAGAAGATTTTATTTGCCCACGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGAATATTTATCTGTGGATGCCCAGCGCTGGGAAGAGGTGGACATTTCAGTTCATTGTGACGTTCACATTTTCAACTGGTTGATAAAATATGTTAAAAGGAACACTAAGGAGAATAAAGATTGTGAGATGCCCACTTTAGGTAAAAGACAATCTATTACTTACTTTAAACAATGTGGCGACTGGCCTGACAAGGTTTAA EMBV3_29574 TGGTCCTCCAGCTAGTGACTACCTCTCATTAGTGTGAGAAATGTGCGAAGACGCTGACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14907 CCCCACATCTCCAAATCCACCAAACCCTAAAATAGCTAAGATACCTGGTGAAAGGGGTCC Gene GeneID:529551|LOC529551:XM_002689367:27_cdna Constitutive 0 NULL GeneID:529551 7 GENE LOC529551 NULL similar to fibrillarin EMBV3_32948 GGGGATGCCCAGAGAAGGGGAAGTGGCCAGCTGGTGAAGAAGCTGAGTGACCTCACAGGC Variant GeneID:532204|C3H1orf66:NM_001015641:168_cdna 490^682 1 EMBV3_24112 GeneID:532204 3 GENE C3H1orf66 C1orf66 CGI-41 chromosome 1 open reading frame 66 ortholog EMBV3_22001 CCCAGCTATGAAACGTTCTCTGTATTAGCTCCGGTCTCCTTTTGACTAGACTGTGGCTCC Gene GeneID:615834|PRMT8:XM_002687892:89_cdna Constitutive 0 NULL GeneID:615834 5 GENE PRMT8 NULL protein arginine methyltransferase 8 EMBV3_33130 AGAGGACCAGTTTGAGATCAACTTCCTGTCCGAGACGGGCGACATCGTCTTCCACATCAA Gene GeneID:528362|GRIFIN:XM_002698167:647_cdna Constitutive 0 NULL GeneID:528362 25 GENE GRIFIN NULL galectin-related inter-fiber protein EMBV3_16690 GTGGCCCAAAGCCCCACAGTGATTTTACATGGCTTATTTTATAAGTTCCAAGTCAACATG Gene BVT0102_099027 - 1 EMBV3_33505 GK000004.2:66312456-66346470 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07156 TCATGTGAAAGAAACCTGGTTTTATGAAACCAAAGACTACTGCATTTCAGTATATATGCG Gene GeneID:616331|AP1S2:NM_001040591:35_cdna Constitutive 2 NULL GeneID:616331 X GENE AP1S2 AP1S1 MGC128457 adaptor-related protein complex 1, sigma 2 subunit EMBV3_43284 CCCAAAGGATGTGCAATTCCAAGTTTCAGCTTGGAAAACTGAAAGTGTCCCACGGAGCTT Gene GeneID:507093|ALDH1A3:XM_002696517:121_cdna UTR3_Alt 3 NULL GeneID:507093 21 GENE ALDH1A3 NULL aldehyde dehydrogenase 1 family, member A3 EMBV3_37295 AATTCCGCAGTTCACATCCCACGCGGCCAAAATCCCTCATCTGTCGCTTCGGGAACACCG Gene GeneID:100300938|LOC100300938:XM_002694576:636_cdna Constitutive 0 NULL GeneID:100300938 17 GENE LOC100300938 NULL hypothetical protein LOC100300938 EMBV3_40210 CCTGATAGAAGTATTTGCAAGGATGTCATCGACAGAAGTCAGAAGACTTTAAAACATTTT Gene GeneID:613439|ELF2:XM_002694343:87_cdna Constitutive 2 NULL GeneID:613439 17 GENE ELF2 NULL E74-like factor 2 (ets domain transcription factor) EMBV3_31196 AGTGGGACTGATTTTGGGACATAGTAGCTGCACAATGAGAGGTTTAGTGGTATCGACTGG Gene GeneID:100336391|LOC100336391:XM_002690899:146_cdna Constitutive 0 NULL GeneID:100336391 10 GENE LOC100336391 NULL protease-like EMBV3_40780 AAAAAAAAGCTCACATTATTTAGAGCAACAGTAATTGGGAATTTTAAATTATTGATTAAA Gene GeneID:514230|L2HGDH:NM_001101090:58_cdna Constitutive 2 NULL GeneID:514230 10 GENE L2HGDH NULL L-2-hydroxyglutarate dehydrogenase EMBV3_25458 TGGCCCACACCATTCTACAGAGTTGGTGCTCAAGACCCAGGATATTCAAAATACCTTGTC Gene GeneID:537136|KLHDC1:XM_002690884:320_cdna UTR3_Alt 2 NULL GeneID:537136 10 GENE KLHDC1 NULL kelch domain containing 1 EMBV3_29539 GCTGGTGGCCCTCTCAGAGTGCATAGTCATATGGCCTATGTGGGCAACATCACCATTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03066 CCTCCTCCGAGAACAGAACAGGCGTTCCGCCCTGGCTTCCTCAGCTTTGTGCAAAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28497 CTCCCAAAAGTGAGTTTGATTATGTGTTGGCTGCGGTTTCTCAGTAAGACTGTCGAGGGG Gene GeneID:534385|ZNF410:NM_001034609:166_cdna Constitutive 0 NULL GeneID:534385 10 GENE ZNF410 MGC128696 zinc finger protein 410 EMBV3_40134 CCAGAGGTGTTGGTTGTGTGTATGACAGTGAGCAGCCTTTGTGTTTGCTTTTGCTTGCAC Gene GeneID:518540|MEOX2:NM_001098045:29_cdna Constitutive 2 NULL GeneID:518540 4 GENE MEOX2 NULL mesenchyme homeobox 2 EMBV3_21854 TCAGGAACCTCCAGATCTCCAATGAGGACCTTTCTAAGGAGCCTTCCATCTCCAGAGAAG Gene GeneID:282430|GLYCAM1:NM_174828:16_cdna Constitutive 0 NULL GeneID:282430 5 GENE GLYCAM1 MGC133626 PP3 glycosylation-dependent cell adhesion molecule 1 EMBV3_20451 GCCCATCAGAAAGTGGCCATAATGAGAAACATTGAGAAGATGCTTGGAGAGGCCTTGGGG Gene GeneID:520864|HIF1AN:NM_001083443:159_cdna Constitutive 1 NULL GeneID:520864 26 GENE HIF1AN MGC148733 hypoxia inducible factor 1, alpha subunit inhibitor EMBV3_00366 CAAAGGAGTGCAGCATGTATGTCATTGGAGGGGGGAGGTCCTTGCCAAAGCTGGCACTGA Variant GeneID:520620|NIT2:NM_001038133:75_cdna 297^732 3 EMBV3_18023 GeneID:520620 1 GENE NIT2 MGC134308 nitrilase family, member 2 EMBV3_18997 AGGGCTGCTTCTGCTCTACCTTTCTGTGGGGATTTCCATCTTCTCTGTAGTGGCCTATAC Gene GeneID:514860|KCNS2:XM_002692781:48_cdna Constitutive 0 NULL GeneID:514860 14 GENE KCNS2 NULL potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2 EMBV3_05455 CTCTGCAGCTACCCACAATGCACACTCAAGTGCAACAGCCTCGGTGATGTACACAGTCAT Gene GeneID:100299465|LOC100299465:XM_002688613:392_cdna Constitutive 0 NULL GeneID:100299465 7 GENE LOC100299465 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_39192 GAGAACCCTACGGAAGAGACCGGCGAGGAGAAGCAGGACACCCAAGAGAAAGAAGGTATT Gene GeneID:281142|ENSA:NM_174050:16_cdna Constitutive 0 NULL GeneID:281142 3 GENE ENSA MGC137433 endosulfine alpha EMBV3_40264 AAGCTTTCTCAGAAACGGAAGACACTGCTGCCCACCAGAGGGAAAAAATTCGGGCTCTGG Variant GeneID:527504|TSNAXIP1:XM_002694824:706_cdna 210^540 1 EMBV3_32338 GeneID:527504 18 GENE TSNAXIP1 NULL translin-associated factor X interacting protein 1 EMBV3_11867 CTGGGGGAGACAGAACTGTCCGTTCAGAAGCCAAATGCCCTTTGTTATGTCCAGTAGGTT Gene BVV0102_238191 + 0 NULL GK000018.2:5211279-5244603 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20376 CCCACAGTGAGAAGAACACAGGAAAGAGCTCCAGTTGACCCATGATGAACACGAAGCACA Gene GeneID:524375|ALPK1:XM_002688076:106_cdna Constitutive 0 NULL GeneID:524375 6 GENE ALPK1 NULL alpha-kinase 1 EMBV3_28661 ATCACCTCCACTTCTCAGCCAGACTCATCTAAGGCTTCTTGTCCTTGTCCATGGGGCAGA Gene GeneID:768235|TMEM198:NM_001078110:133_cdna Constitutive 0 NULL GeneID:768235 2 GENE TMEM198 MGC139616 transmembrane protein 198 EMBV3_25276 CTAATTTGTTGGGAAGCAATGAGATGTGAGCCAGGAGCTGTGGGGTTTCCTACCTGGCCT Gene GeneID:531137|LGALS3BP:NM_001046316:422_cdna Constitutive 0 NULL GeneID:531137 19 GENE LGALS3BP MGC127786 lectin, galactoside-binding, soluble, 3 binding protein EMBV3_22582 GTGTGGCCTGGACAACTTCAGGACCTTCGATTGGGTCATTGAGAACCACGGGGATGAACA Gene GeneID:513533|PMVK:NM_001046151:129_cdna Constitutive 1 NULL GeneID:513533 3 GENE PMVK MGC137482 phosphomevalonate kinase EMBV3_12597 ATGCGCGCTGAGTACTGGTCCGTGTCGGCCAAGACCGGAGAGAATGTGAAGGCGTTTTTT Gene GeneID:518312|RAB36:XM_002694697:300_cdna Constitutive 0 NULL GeneID:518312 17 GENE RAB36 NULL RAB36, member RAS oncogene family EMBV3_34922 CAGCCTGCAGATCAGCCGACAGACATGAGACGAAGGTGTGAGGAAGAAGCACAGGAAATA Gene GeneID:534587|LOC534587:XR_083874:221_cdna Constitutive 0 NULL GeneID:534587 16 PSEUDO LOC534587 NULL similar to lin-9 homolog (C. elegans) EMBV3_29846 CGATTGAGGACACCCATGAACCTTCCCAAAGGATGGTTTACATGGCCGGACTCGTTTTTG Variant GeneID:533936|KLHL2:NM_001102160:22_cdna 709^826 3 EMBV3_29829 GeneID:533936 17 GENE KLHL2 MGC155024 kelch-like 2, Mayven (Drosophila) EMBV3_35730 GCAGCAGGCAGGACAGATGGGGCACCTTTTTTTAAGACAAAACTATATTCATTGTTGACG Gene GeneID:790010|FTSJ2:XM_002698232:842_cdna Constitutive 1 NULL GeneID:790010 25 GENE FTSJ2 NULL FtsJ homolog 2 (E. coli) EMBV3_20797 CCTGGGAGACAGCGCTGTGGGCAAGTCCAAGTGTTCGATGTGCAGAGGAAAATCACGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12034 GGAAGCACTTCAAAGAGCCATCAACAGCAACAAAGGATTTATCTCAGCCACAGTCACAGG Gene GeneID:527520|HERC6:XM_002688184:128_cdna Constitutive 0 NULL GeneID:527520 6 GENE HERC6 NULL hect domain and RLD 6 EMBV3_08927 CCTCCTGGTACATTTAACCGAGGCCGCATTTATCCCCGTGAGAAGAGGAAGGTGCCAAAT Gene BVV0102_102754 + 0 NULL GK000010.2:2450740-2928851 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012340 TCONS_00012338 TCONS_00012342 TCONS_00012344 TCONS_00012339 TCONS_00012343 TCONS_00012341 1 XLOC_007843 Coding TCONS_00012342 XLOC_007843 Coding Coding KCNN2 10:2876878-3289226 j TSS9388 2850 1 TCONS_00012342_7 610 0.071578947368421 9 0.993110171772803 5.01388681055689e-28 5.61335191564532e-17 1.49323398172868e-34 4.70993111861018e-69 4.44724340197966e-06 9.30433994921302e-15 1.94337135403507e-17 1.46234362158648e-69 2.31040954702885e-10 1.92981275485387e-188 0 0 3.54414190890671e-22 1.72116930149259e-43 1.66691281747595e-55 0 0 0 1.02712444235078e-79 0.00123743291881113 4.92217180975013e-121 0 5.61697362805625e-44 1.72664930560442e-15 2.84470711075414e-61 7.72700376425683e-18 9.14154073451393e-17 9.83682415591331e-43 5.82482962959765e-17 2.38224254774322e-77 XM_005211182.1 KCNN2 PREDICTED: Bos taurus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), 0.0 3782 100.00 0.735438596491228 NM_021614.3 KCNN2 Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), 0.0 2313 94.71 0.509473684210526 TCONS_00012342_7 sp|P58390|KCNN2_MOUSE KCNN2_MOUSE Small conductance calcium-activated potassium channel protein 2; 0.0 899 94.35 0.980327868852459 1 coding 0 0 0 0 -0.0156522649253335 0.915107056185911 0.00806757319057121 0.892413501237031 CGGCCCTGCCAGGCAGGGACGGAGAGAGAGGGAGTCCCCCGTCCCGGCAGGGCGTTCTGCGAGCGGTTTCAGCGTCCAGCAAGGTCGGTGCTGAAGCAGGGCCGGGCGCGGGGAAGCTGGGCTCCGGAGGGTGGACCCCAAACAGCCGCCACTGGGCGGCAGGGACCCGGCCGGGCCGCTCGGCGCGCCAGGACTCCCCCGGGGGTGCTCGGAGACCCCGGAGAGGAGGAGCGGGGAGGGGCGCGGGGCTCTCCCAGGCGGCGAGCTGTCCCGGAGTTTGAGGACCGGAGAGGCAGCTGGTTTCTGCCCAGGACTCCTGATTTCTTCTCAGATGGAAACAGTTTCTCCAGGTGAACCTGCTGGAATTCTCAATGGAGTCTCACTCGGGTTTAGCCTCCTGGTACATTTAACCGAGGCCGCATTTATCCCCGTGAGAAGAGGAAGGTGCCAAATGGAGCGGGGCTGTCGGTTGCAGAACACGGCTATAAAGACGCTCTCAGACCAGACAGTCCTCCTCTTACCTGCAGACCATTCTAAGGTGTCTGTCCTCACGTGGAGATTCTTGCTGAGAGAACTACAAAAGGATGGACTCCAGCAAAAGAATAAGTGAATCTAAGGAATGGAGTGGGATATAAGCAACGACAGTGGAGAGGAGGAAGAGGAACAGAAGACGAGCTGGTGGTGGCTGGCGGTCGCTGAGCATCCCCCAAGACCCTCAAGCAAGCGTCTTCTCCAAGGCAGGAAAAGCCCACGGACCTATCCACTGGGGTGGCCAGAGGGCCTGAGCGCGTAACCCAGGACCCGGCGGCCGGGGGCGCCAGCCCCTCATGTTCCGCAGAAGGCGCAAATGTGATGTCATGCCCATTGTTTTGGTGCGCCCGACCAATCGGACTCGCCGCCTGGATTCTACCGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCTCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCCTGGTCTCCCTGCAGCTTTAACAGCCCTGACATGGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCTCGGAGCAGCCGCCGCCGCCGCGCTCCTCGCACCTGCATTGCCAGCAGCAGCAGCAGAGCCAGGACAAGCCGTGCGCGCCCTTCGCGTCCCTCCCGCACCCTCACCACCACCCGCATCTCGCGCACCAGCAGCCGGGCAGCGGCGGCAGCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCTCCGGTGCCCCGGGGGCGGGGGCGGGGGATAACCTGTCCCTGCTGCTCCGTACCTCCTCGCCCGGCGGCGGCGCCTTCCGGACCCGCACTTCCTCGCCGCTGTCGGGCTCGTCGTGCTGCTGCTGCTGCTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAACAGCCAGCGTCCGCCTCCCAGCACCACCAGTGCCACAGCCTGCAGCCCGCCGCCAGCCCCACGGGCAGCCTCGGCAGCCTGGGCTCCGGGCCCCCGCTCTCGCACTACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAACCCCTTCACCGAAATAGCCATGAGCAGCTGTAGGTACAACGGGGGCGTCATGCGGCCGCTCAGCAACTTGAGCGCGTCCCGCCGGAACCTGCACGAGATGGACTCCGAGGCGCAGCCCCTACAGCCCCCGATGTCTGTCGGAGGAGGTGGCGGCGCGTCCTCCCCGTCTGCTGCCGCGGCCGCCGCCGCTTCGTCCTCAGCCCCGGAGATCGTGGTATCCAAGCCGGAGCACAACAACTCCAATAACCTGGCGCTATACGGAGCCGGCGGCGGCGGCGGCAGCACTGGAGGAGGCGGTGGTGGTGGCGGCGGCGGCGGCAGCGGGCATGGCAGCAGCAGTGGCACCAAGTCCAGCAAAAAGAAGAACCAGAACATCGGCTACAAGCTGGGCCACCGGCGCGCCCTGTTCGAGAAGCGCAAGCGGCTCAGCGACTATGCGCTCATCTTTGGCATGTTCGGCATCGTGGTTATGGTCATCGAGACCGAGCTGTCGTGGGGCGCCTACGACAAGGCGTCACTGTATTCCTTAGCTCTGAAATGCCTTATCAGTCTCTCCACGATCATCCTGCTTGGTCTGATCATCGTTTACCACGCCAGGGAAATACAGTTGTTCATGGTGGACAATGGAGCAGATGACTGGAGAATAGCCATGACTTATGAGCGTATTTTCTTCATCTGCTTGGAAATACTGGTGTGTGCTATTCATCCCATACCTGGGAATTATACGTTCACATGGACGGCCCGGCTTGCCTTCTCCTATGCCCCATCCACCACCACCGCTGATGTGGATATTATTTTATCTATACCAATGTTCTTAAGACTCTATCTGATTGCCAGAGTCATGCTTTTACATAGCAAACTTTTCACTGATGCCTCCTCTAGAAGCATTGGAGCACTTAATAAGATAAACTTCAATACGCGTTTTGTTATGAAGACTTTAATGACTATATGCCCAGGAACTGTACTCTTGGTTTTTAGTATCTCATTATGGATAATTGCCGCATGGACTGTCCGAGCTTGTGAAAGGCGATGAACCTTCGTTGACCCATCATTATCAAGCCAAGTTCACAATTTACGAAAAAGCTCATCTTGGTGTTATGCATTCTCTGAGTGTGGAAAAATGTGGAATGACAAGTATCTACCTTTACGGTATTTACAGTATCATACAGAGTAGTTTGACTGCCCTAAAAATTCCCCATGCTCCACCTGTTTATCCCTCCCTT EMBV3_05135 TTAAACGTTAGGAACACACCAGGTCACCTAATACCCACCCCGAGAACGCTCACAAACCTG Gene GeneID:512254|MEF2C:NM_001046113:9_cdna Constitutive 0 NULL GeneID:512254 7 GENE MEF2C MGC137710 myocyte enhancer factor 2C EMBV3_12583 GCAAAGGACAGACGTGTGCCGTGCAATCGAAGGACTTCTGGAGGCGACTGAAAGAAAGGT Gene BVT0102_168570 + 0 NULL GK000013.2:17406595-17486171 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17525 GGATGATGCCAGGGAGAAAATGAGAAGACTAGTGAAGGAGCACAAAGGACCTCTTAACTG Gene GeneID:521106|UTP3:XM_002688340:113_cdna Constitutive 0 NULL GeneID:521106 6 GENE UTP3 SAS10 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) EMBV3_05540 AACCGCCTGGTTTACATGCAACTGCGGGCCTCCTTACACCTACCTCTCTATAGGCTTCTA Gene GeneID:784642|LOC784642:XR_083724:43_cdna Constitutive 0 NULL GeneID:784642 7 PSEUDO LOC784642 NULL similar to ferritin L subunit EMBV3_09068 TGACAGCGATGGCTCCTGGAAATGGGTGGACGGCACAGACTACAAGCACAGCTACAAGAA Gene GeneID:531519|ASGR2:NM_001075952:132_cdna Constitutive 0 NULL GeneID:531519 19 GENE ASGR2 MGC137129 asialoglycoprotein receptor 2 EMBV3_41841 ATTCGCGCCACTTCCCCATGACCGGCTTCCGCTTAACGTTCCTGAATCTGGTGCACTTGA Gene GeneID:100300684|LOC100300684:XM_002699503:75_cdna Constitutive 0 NULL GeneID:100300684 X GENE LOC100300684 NULL hypothetical protein LOC100300684 EMBV3_43621 ACCAAGGCATTCTCAAATCCTGAACCCTGAACCAAGGCTTTTCCAGACCCTACCCCAGCT Gene GeneID:508703|PRAF2:NM_001046009:45_cdna Constitutive 0 NULL GeneID:508703 X GENE PRAF2 MGC137493 PRA1 domain family, member 2 EMBV3_31929 TAAAGGTCACCCTCAAAACCAGCACTCCAAGCAACCTTGACTTTATTCTTTGCCAGGGGC Gene GeneID:538628|RUNX1T1:NM_001099385:70_cdna UTR3_Alt 3 NULL GeneID:538628 14 GENE RUNX1T1 NULL runt-related transcription factor 1; translocated to, 1 (cyclin D-related) EMBV3_11232 AGACCCTTCTAGTCAGAAGCGAGCTATAGAGTTGGCAACAACACTTGATGAATCCCTCAC Gene GeneID:536676|NAA15:XM_002694340:79_cdna UTR3_Alt 2 NULL GeneID:536676 17 GENE NAA15 NARG1 N(alpha)-acetyltransferase 15, NatA auxiliary subunit EMBV3_42197 CAGCTATGGTAACACTCAGGGCTGCCGTTCTTGTAGCACCATGCCTAGTACTGATAAAGT Gene GeneID:781403|LOC781403:XM_002693291:95_cdna Constitutive 0 NULL GeneID:781403 15 GENE LOC781403 NULL similar to Olfactory receptor 52A1 (Olfactory receptor OR11-319) (HPFH1OR) (Odorant receptor HOR3beta4) EMBV3_18796 TTGGACAGAAAGAGATGAAGCTAGGCAGCTGATGGTGGAGTGTCGATCATGGTAAAGCCC Gene GeneID:522917|RIOK3:NM_001075836:25_cdna UTR3_Alt 5 NULL GeneID:522917 24 GENE RIOK3 MGC138071 RIO kinase 3 (yeast) EMBV3_08743 GCAGTGAGAAGATACGATGCTTCAGCTTTGAGGTACTTGCATTCCCAAACACTGCTAACT Gene BVT0102_002755 - 1 EMBV3_20667 GK000019.2:10812767-10825783 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098704 1 XLOC_058948 NonCoding TCONS_00098704 XLOC_058948 NonCoding NonCoding - 19:10823914-10824900 - TSS73080 986 2 TCONS_00098704_2 39 1 0 0 0 0 0 0 0 5.91451291363929e-06 0 8.00217101132083e-06 1.25187406815927e-05 2.32168949851142e-06 0 0 0.000376891775658442 0.00014429998920538 0.000214292653307428 3.36760944736615e-05 2.54471538680663e-05 0 0 9.23646912475749e-06 0 0 0.000595094805367347 0 2.14364816352766e-05 0 9.74156021607539e-05 0.000123088132630302 1.82927915941197e-05 0 noncoding 0 0 0 0 0.0929532195503553 0.542172453611215 -0.00378012986923931 0.939102440288119 GGTCATTTCAAATGCTGCAGAGTACAGAACATCTTCAAGTATTTAGCTTAACAAAACATAATGAAATTTTGCCAAGCATAAATATTCACTCTGATGACATGGTGGTGGGGCTTTTCTTTGCAGAATAGTCTATCTGCTATTTTAACTGCCAGATTCTTCTCTCATTCTCAGTATGTGAGACATACTTTGGGGAAAACATTAAAAGCAATTTAAATGATTAAGCAAATTTCTCTAGGTAAAACTGCTTGACACACAAAATTACTGTCTCCCTAATAGGGGTTTTATGTTTAACTGAAAAGGGCACTAAAAATAATTAATGTGTACTTGAATAGCTCAAGATCTTTCTGGAAAAACCATTACATCTCTTTTAAAACGAAAGGCACAGAACGAAAATTCTTTTATCCTTTATTGTATTTGTGCTGTTATGAAGCATCCTTATAGCTTATATTTAGCAACAAAGTACTGGGAAGATTATTAACTGATACTGAATACCGTAGACACCTTAAAGCAGTGAGAAGATACGATGCTTCAGCTTTGAGGTACTTGCATTCCCAAACACTGCTAACTTACACTGTTGAGGTGGTCCCACTGAAACACACCGCTAATAGTTAATCTTCTCCAAGAGCGAATCTTAGTCACACGGAGGAAAAACCCACCTAAATCTTTGAGGCTCATTATTTGACATGGCTGAAAAAAAAGTCTTCCTGCTACAATTTCAGTCCTATTCTTGAGCGCATTTAGGACACTCAAAATCTCCAGCAAATTACTAGGCTACACTCATAAACACGTCTGCCAAAATGTCCGCAGAAACGTTAAGAAAGGCCATCACAAGGTCTATTTGAGATACCTCATCAATGGCCTTCACTGCCCTTTGAGTCAATTGTTTAACATCCGAAGAGACTATTAGCTCTGCTAGAATCCAAGCGTCAGCTTCTCCAACCGTCAGAAGGGCAGAGAGGATTTTAAGCCCCATTCCAATGCCCCCT TCONS_00092190 . 5' 409 TCONS_00092190 . 5' 409 EMBV3_42506 TTGTACATAATTCCAATTCTGCAAAGCTCTCCCTGACGGCAGATGGTTTCCCTCACCTCT Gene GeneID:538384|PRDM1:XM_002690135:8_cdna Constitutive 2 NULL GeneID:538384 9 GENE PRDM1 NULL PR domain containing 1, with ZNF domain EMBV3_37670 CTCCTGCCACCAGCCCTGGGGAATATGCACGAGGTATTTAGTCAACTGGCACCTTTTGAA Gene GeneID:514150|INTS5:NM_001098026:82_cdna Constitutive 0 NULL GeneID:514150 29 GENE INTS5 MGC143225 integrator complex subunit 5 EMBV3_24760 CGGAGGGTACAGAACCATCACTGGTCCAGGTTAACATCCAAAACTCTGGCAACACCTGAT Gene GeneID:504474|STT3B:NM_001097570:41_cdna Constitutive 2 NULL GeneID:504474 22 GENE STT3B MGC152029 STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) EMBV3_06374 ATTTCAGACTGAACTCTTTGTCATGTACCCCAGGTAGGGACACCCCGTAGGGACAGCCAC Gene BVV0101_026936 + 0 NULL GK000011.2:86368609-86501576 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06706 AGGATGACTTGCTGTCAATCAAACCTACCTGGGCACCTGATTGGGCCAGAAAGCTAGCCA Gene GeneID:786526|LOC786526:XM_002689845:24_cdna Constitutive 0 NULL GeneID:786526 8 GENE LOC786526 NULL similar to RIKEN cDNA 4930458L03 EMBV3_20922 GTACAAGCGGCACCCGTAACGGGCCTTGCTGTACGGGTACTGGAGGATGATGAAGTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35867 CAGCGTGACGGAGGAGGCGGTGGACAGACACCCGGGCAGGCGGTCAGGGTCGCAATCCCA Variant GeneID:510778|CCDC124:NM_001038523:53_cdna 529^729 2 EMBV3_05409 GeneID:510778 7 GENE CCDC124 MGC133908 coiled-coil domain containing 124 EMBV3_11196 AGAACCCTAAAAGAAGGCAAAGCCTTAGGGTTCATCATTTCAGGATCCCTCTCGGTGTTG Variant GeneID:415111|MS4A8B:NM_001034056:152_cdna 266^388 1 EMBV3_34176 GeneID:415111 29 GENE MS4A8B MGC127193 membrane-spanning 4-domains, subfamily A, member 8B EMBV3_29669 GCATGCTAAGTCTGAGCTTGGATCTTCCAGTGGCAAGTTCCCATGTGATAAGATATCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12502 GCCAAATACGTAATCGACGTGGAGGAGCCGGTCCTGCACCCCCCAAGGGTGGCCCTAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41645 GCTGTGAATCCAGAGCTCTTCATTAAACCTAAGATGCTGCTGAGGAAGAAGGATGCCGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09103 CATTCTCCCCAGAAGACCTGCCCGCTCCCAGGACTAAGATTGGCCTGAGGCTGCATTAAA Gene GeneID:509200|HNF4A:NM_001015557:967_cdna Constitutive 2 NULL GeneID:509200 13 GENE HNF4A NULL hepatocyte nuclear factor 4, alpha EMBV3_25546 AGGCGTCGATGAGACTTTACACACAAAGCGTTCACCACAGGGCCAGACACACTGACAGAA Gene BVT0102_320068 + 0 NULL GK000007.2:77495895-79283393 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217787 TCONS_00217788 1 XLOC_131578 NonCoding TCONS_00217787 XLOC_131578 NonCoding NonCoding - 7:78035829-78203375 - TSS162102 1603 2 TCONS_00217787_4 68 4 0.990456295323644 4.95093667018007e-22 0.0001445588407475 0.000593423897623036 0.000985811306445557 0.00018753606449702 0.000120340661313043 5.72376018046738e-05 3.75193767442035e-05 0.000730353354662706 0 0 0 1.99777877887573e-06 5.27228610531805e-05 2.94793288393713e-36 0 0 0 0.00107488257542949 0.000739794068559799 0.000151207791305302 0 0 0 0.000714341779813946 0.000208268872408596 9.49803250564936e-05 0 0 0 0 noncoding 0 0 0 0 -0.141138353695519 0.295858393365733 -0.000191545010039679 0.997279428080636 GGGGTTCCCGTAGTTGGCGCACAGCGGAGGAGGCAAAGGCGGTGCTGCGACCCCAACCCCAGAGGGCGCCCAGCCGCCTCAAATAAGGGTCAGACCAAGCCTGCGGCTCAGGCTGACGCTCCGAGGTGAGCGAGTGAGTGCCTTCCACAGGACGCCTGGGCGCTTCTTCCTCCAGCCTCTTCCATACTGGGCCCTGGGGCAGAGGACGTGTTTCACATGTAGCTATAGATTTGGTGTGTCTGTGAGAGGTCCAAGAAAAAAAAGAATCTTGGAAAAGCAGTGTTTTCCCCAGCTGAGTTCAAAATGAAGCAAAAAGCATCTGCAAAACCTGGGCAACTGACAAGTGAGGAAATCCAGTCTGCTTCCATATAAGAAACAATGACAGCGCTGAATCTGAAGATGACTGTGAAGTACCTTAATCTGGCTGTGAGGGTCCCCCGACTACCTGCTGTAAGGGTAATTCAGAGCTCTGCACGACGCAGATCACAAAGATGACGTGAGGCGTCGATGAGACTTTACACACAAAGCGTTCACCACAGGGCCAGACACACTGACAGAATTCGAGCAAAGACTGTGGTCGTCATCATCATTTCAATACAAGGTAGCCTTAGGATCATCAGGCGGCTGACGCTTGGTTTTCCAAATATTTTAAATTGTGAATTTTCATGTCCACACTAGGAATTCTGTTGCCTCTCTCCTTTCACCTACATGCTGCCTTTTCTTTAAGACTCAAGAAGGACACACAGGTAGTAGGTAGTAACAAAGGGCTTTGTCATCTGAATACCTGACTTTGAATCCTGTATCTCCTATTTCTGCGGAAGTTGTTAACCTTTGTAAACCTCAGTCGTCCCATCAGTCAAACAGGATAATCCCAATACTCACCTCCTAGACATATGAGAATTAAATAATTCATATCAAATATGTTACATGGTACACCGTAGACATTCAACTGATATTTTTTGAACCATTAAGTCCAAGTTCCATACTCTCCAGAAATCTTTTCTCAACCAGCCCCACCCCTGGTGGCTCAAATCTTCATTTAAAAATGGTCTGTGCCACTCAGCACAGAATCTGCCTTGTTACAGCATTGCCATTGTCTTGAATTATTTGTTATGAACTTTTGCCCCCAAAGGGCTTTGACTTTTAGAAAAGACAAAGAATTACATTCTGCCTCCCCTACTCAAAGTGTGTACCACGTGATTTGCCTTCATTTGCACTCACTTGTTCACTCACACATTCCTTCAATAAACATGCTCTGTCATGTTGATGTGCTTACTAAAACTACCTCTATTACTGAGTCCTTGATCTCATGGGATTAAGAGTTTTCTAGGAAAAAAAGACAAACAGAATGTTAGAAAGAGTAAAAGTCATTAATAAAGCAAACCAATATTGTTGATTTTAGATAATTAGTAAAGTATGTATTATACATGTATATATTGTATACATATGTGCAGAGGCTAACACTAGGAAAAGAAGTGAGCTTATATCATACTATAGTTAAGAATCAATGACTCAATGCTTTTGAAATTTTAGAATGTTAACTTCTTACCTTCTCATCTTTAGGTGATATGAAGTATTAGGGGCAATGCTCATTGCTCAGTTT TCONS_00214233 TCONS_00214235 r 3' 698034 TCONS_00214233 TCONS_00214235 r 3' 699237 EMBV3_41776 CGAGTCTCAAGGTCTTTGTTGGACTGAGGCTGGGTTGGGTGCAGCGGCCTTGATCCACAT Gene BVT0102_391900 + 1 EMBV3_26879 GK000013.2:42566092-42791821 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042733 TCONS_00042732 TCONS_00042731 1 XLOC_025745 NonCoding TCONS_00042731 XLOC_025745 NonCoding NonCoding - 13:42674267-42681071 - TSS31746 1631 2 TCONS_00042731_1 36 0.142857142857143 3 0.760693811553726 8.68432550331581e-09 8.39801907974999e-05 0.000355547230952203 4.22329161921483e-10 3.88012136096597e-05 2.42730489305299e-10 0.0012389184969957 1.04638228043775e-12 0.000157383926057443 1.56769467127751e-10 8.71872222842411e-13 1.08929407874739e-12 1.47008282937536e-13 3.06845762733444e-05 4.70782863603114e-12 0 0 0 7.2514734905597e-09 0.00139770273049435 9.94559008449336e-05 0 0 0 0.00133550287950233 1.00467591684773e-10 2.29601189522784e-09 0 3.06625879046053e-12 6.33226097484854e-09 XM_005227463.1 LAMP2 PREDICTED: Bos taurus lysosomal-associated membrane protein 2 (LAMP2), transcript variant X1, mRNA. 1e-15 89.7 76.19 0.0729613733905579 0 noncoding 0 0 0 0 0.0690294721572733 0.626255027414692 0.0342624611649345 0.63015544035676 CATTCAGCCCTCACCAAAAATACCTGATGGGACTCAGAATTCACAGCCCTCCACTGTGCCCTTCTGCTTCTCCCTGAAGCTGCTGACAGCTCCTCAAGGCCTCTCATCCATCCCCTCTCATCCTTCCCCTGACCACTGCCCTCACCCACAGCACCCAGGAACTCAAACAGAGCAAACAACGAGGGCTTCTGTCCCCAGCTCAACCCTCTTCCCGCTGAAGCACAAAGCTTTACTTCTGATCCTTGAAACCATGCATGATGCACGTGAAGGAGGAGTGACCTGGACCAGAGTCCACTGCCTGGACCAGAGCTCACTGACTGGACTAAAGCTCAGTGACCAAGTACCTTGAAGCCTGAGAGGAGCCCACAGGCAAGGTCTCTGTGTGCAGATTAAGTGGTCCAGAGTCCAGAGAGGCCCCCACCACACTCTCGGCAGGAAGAGGTCAGCACAGGGGTGACACAGCACCCGCCAGGGAGGGAGGAGCCTGACGGAAGGACAGCTTGGCCATCCTGCTGGGATGTGGATCAAGGCCGCTGCACCCAACCCAGCCTCAGTCCAACAAAGACCTTGAGACTCGGAGGGGGGCCGCAAGGTCCCCCAGAAGGACTCAAACAGAAGTTAGCTTGGTTGCAGGCTTTAGAGTTTATTTACAAAATAACCAGCCTTCTCACTCATGCTGGAGACAATGGTGGAATGTTACTTCTTACAAGACCTTTACTTTGTAGTAAAGTAAAAATGCTATATAATTACTTGTTTCAGCAGATTTCTTGGTGATTTTATTACAAAGGCTAGAAAGGAAAATACTGCCATACTGCTGAAATTATGTGTAATCCTGTAAAAACAATGTATGTACCCAGGTTGCTATGTTTTTGCTAAGTTCCCCCTCAATTAGTTTACAAACAAATCCTCTTTTAAATGTTCAAGAGGAACACATTTTTAAAAGAAGGTCATGGCAAATTTTCTTATACAGCTAACACTTCCTTTTTAATGTGATTATTCTAAAACATATGAGAATGGAATTTAACAGTTTTAGACTGGTTCTGAATGTGTTTTTAATTAGCTGTAAACTAGGGCCCATGACTTAGCATCTTCGAGCCTCCATGTCCTCCTCTATAAAATGACGCCATTGGCCAGTTCACATCTCAGACACCTTCCAAAATTACTGTCCTAGTGATGCTGATAAAAGTCATACGTCTTAGCCACAACTTAAAAACACTATCCCGAGGTCCCACAGAACACAAACTTCTATCCGTTGATATCTCTGCTACAGTTTCATATTATTGAGCACTGAGGTGTTTGTTATACTTTCTGACACAAACAATAATCTAATCAACATCCTCAAAGCAGTTATCCTAGAGATTGTTGCTGAGCAGTGTGATCTTTTGAAATGCTCTCTTTATCACATATAAATGGTAGATCCTGGGACTTCCCTGGTGATCCAGTGGCTAAGACTTGCACTTCCATGGTGGGGGACATGAGTTGAATCCCTGGCTGAGGAACTAGGATCCTGCATGCCGTGCAGTATGGCCAAAAATTTTTTTTTAATAAAATAAACTCTAGATTCTGTTTCTGAGTTATTTGTTCCATTAATTTCTATGTCTTATTGTGCAAATCATTATATCTTTATAACA TCONS_00045197 r 5' 108177 TCONS_00045197 r 5' 108177 EMBV3_37741 GCAATGCCCGGGTGCGGTGGTGATTCCATTATAACGAGGGCTTAACTAGCAGAAGGTTAC Gene BVT0101_030270 + 0 NULL GK000024.2:43271907-43296286 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139076 TCONS_00140319 TCONS_00140318 2 XLOC_084806 XLOC_085104 Coding TCONS_00139076 XLOC_084806 NonCoding Coding LOC100847271 24:43271831-43273456 j TSS104096 1458 1 TCONS_00139076_2 116 0.0747599451303155 2 0.103448275862069 0.0107224149542283 0.00493759520440301 0.0113247769969479 0.00686991541953253 0.00768229180827511 0.00157987438891864 0.00755486406890478 0.00667793489452323 0.00582341821788384 0.00233516870055889 0.000401940690832639 0.000630281397102185 0.00238199201841168 0.00782913347080164 0.00335578199537558 0 4.55480925450089e-05 0 0.00987780152593637 0.00760871663937984 0.00178431381124154 6.54884389338095e-21 0 1.15232229205324e-05 0.0186362046058738 0.00794162521037409 0.0108996116693263 0.00044797796908914 9.42713270442781e-05 0.0015047175186429 XM_868279.5 SLMO1 PREDICTED: Bos taurus slowmo homolog 1 (Drosophila) (SLMO1), 1e-64 251 100.00 0.0946502057613169 0 noncoding GCAAGCAGCGGTGCGCCATGGCCGCCGGCGCGCCGCTCAGGCCGGGAGCGGACGCGGGGGCGGCACCGGATGGCCAAGAGGACCCGGAGCGGAGGCCACGGGACGGAGGGGGCGGGGCCGGGTCGGGCGCGAGCAGAGGCGCTGCACCTGTTGGTGCGCCCCGCCTACGCTGCTGAGGCCCGGCGGAGTGGATCTTTCCCTCAGGCAGAGGCTATCTTCGACTCTTCGGACGCCTCTCTCGGTAGGTCCCTCGTCACATACTTTTTGTTGAGCGTCTGTTCTGTGGGGCCTTGTCAGTGGCGGTGCCGTCAGGAACCCGGCCGACGGCAGGTGAAGCGGCGCGGCCGTCAGGCTCCCACAGTGAGGGGGACTTGTGCGCCCGGGCGAGGTAGGCCCACCGGGCCTGAGGGGAAGAAATGAGGAAAGAGACTTGAGAGACTGTGGCGGGTCAAGTCGTGAGGGCCCTGCTTGGGGGAGCGGGGACGCGGGCGCGTTCTTTCCCAGATGGGTTTGAGCAGGCAAGCGTGACCGCGACTGAGGTGTAGGCAGCACGGGCTTTCCTCAGCGGCCGAAGAGCAGGGAAGCGGGAGCTAAGTTCAGGGTTGAGTCTCGCCGCCTGGCCGCGGCCCCGGAGGCTGGGTCGTTTCCTCACAGAGAGAATTCAGAGGCTGCGGGGCGGGAGCGCGAGGGCCGTCCCAAGTTTCTCCCCGCGAGTCGGTAACGTGGGCGGGACGGCGGGGAAGAGGGGTAGTAGCTAACGGGCGGGACTCGGGGGTCTCCTCTGGATCTTCCGGCCGCCGCCTCCTCAGGGGGCAGCGAGTTTTGTTCGTCGTTTGGTCTTTCGAGTCTGTTTTGGTGGCCGGCGCGGGACGGGCAATGCCCGGGTGCGGTGGTGATTCTATTGTAACGAGGGCTTAACTAGCAGAAGGTTACTTTCTGACACGGAGGTTCCCGCCCTTGTCTGTCTCCTCAAGAACCGCCTGGTCACAGGATGTAAGGTCTCCTGTCACATGGCCCACACCCCCTTCTCTGCTCATTCTGCCTGCTCTAACATTGATTGCCCCCCCTCAAGGAGTCTGGACCCTTAGAGTCTTTTAAGGGTCGAAGGTCCACCTTCTGTAGCTGCTTCAAGCCGAGTCAGGGCTTATCCCTACCTGTGGGGTCCAGACCACCTTGCTGTCAGAGGTAGGGGCCTCCGGGACACGGATGGAGCGCAGGGAGTAGGAAACTGCAGCTCAGTCCAGGTGATGTTGGTTGTCTCCATCTTCATGTGGGCCAGGTTGAAATTCCTGGCATACTGTCACCTGCAGGTGAAACTTGTAATGTGGAAAAAACAAACTTAACAAGCAGGTTTAGAAGGCAGGGGCCAAAATTCAGCAAAAGTATTGTTGGGAACAGAGGTCCAAATAGGGGTAGGACCAGGGGTATGTATTAACAGTACCCCTCTGACTGTGGTCC EMBV3_19853 GGGCATCCATGTGTACCTGAAAAAGAAGGAATACAGCGACTGCGCCTGGGAAATCGTCAG Gene GeneID:528513|IFN-tau-c1:NM_001031765:92_cdna Constitutive 0 NULL GeneID:528513 8 GENE IFN-tau-c1 NULL interferon tau c1 EMBV3_03410 GACACACCAAGGAGATAACGGGAGAATTCCTCTGTGTCACCGTTCTTGCTCTCTTGTATC Gene BVV0101_075351 + 1 EMBV3_16354 GK000008.2:90305612-90443667 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13919 TCTCTGGTGCAGGAAAAATGTTCAGTTCAGGAGTGGATCTCATCACTGCCTGTGACATCC Variant GeneID:507431|ECH1:XM_002694978:152_cdna 416^589 1 EMBV3_05993 GeneID:507431 18 GENE ECH1 NULL enoyl Coenzyme A hydratase 1, peroxisomal EMBV3_02963 TGAGTAAATATCAGCAAAGCTTCCAGTCCCCCCAGCAGCATTTTCTCTGGTTTGTGAGAG Gene GeneID:100125415|GIMAP7:NM_001105034:544_cdna Constitutive 0 NULL GeneID:100125415 4 GENE GIMAP7 MGC157124 GTPase, IMAP family member 7 EMBV3_41201 ATGTGTGGGGGCGGCGAGGATTCTAAGTGTAATTTCTGAGCCATTGTTCTGTCTAGGGGA Gene BVT0102_153165 + 0 NULL GK000020.2:4821535-4908291 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114290 TCONS_00114291 1 XLOC_069257 Coding TCONS_00114290 XLOC_069257 Coding Coding STC2 20:4905254-4918978 = TSS85280 3979 1 TCONS_00114290_1 302 0.0573008293541091 4 0.71034030459812 0 0 3.02230943431655e-05 0 0 0 0 0 3.76664561474784e-05 0.00102044200780229 0.000780986194972012 0.000934966607996431 1.65515245751566e-08 0.000884115167394988 1.20167734339039e-05 0.000305305589999702 0 0.00151370026489302 0 0 0 2.9830303761344e-05 0.00017060450214565 7.18312426422298e-05 0 0 0 0.00020034727617295 0.000159704261667628 1.66202313527884e-05 NM_001192745.1 STC2 Bos taurus stanniocalcin 2 (STC2), mRNA. 0.0 1635 99.89 0.228198039708469 NM_003714.2 STC2 Homo sapiens stanniocalcin 2 (STC2), mRNA. 0.0 2205 77.78 0.691379743654184 TCONS_00114290_1 sp|O76061|STC2_HUMAN STC2_HUMAN Stanniocalcin-2; 0.0 570 91.06 0.996688741721854 1 coding 0 0 0 0 0.0827863354839442 0.550642564106319 0.0310705130354955 0.530530118283648 AGGTCTCCGGGCTGGAGGTTTACACCAAGAACCATGTGTGCCGAGCGGCTGGGCCAGTTCGTGACCCTGGCTTTGGTGCTGGTTACCTTCGATCCAGCTCGAGGGACCGACGCCACCAACACGCCCGAAGGTCCCCAAGACAGGGGCTCCCAGCAGAAAGGCCGTCTGTCCTTGCAGAACACAGCGGAAATCCAGCACTGTTTGGTCAACCCTGGCGATGTGGGGTGTGGCGTGTTTGAATGTTTCGAGAACAACTCTTGTGAGATTCGGGGCTTACACGGAATTTGCATGACTTTTCTGCACAACGCTGGAAAATTTGATGCCCAGGGCAAGTCGTTCATCAAAGATGCCTTGAAGTGTAAGGCCCACGCTCTGCGGCACAGATTCAGCTGTATAAGCCGGAAGTGTCCGGCCATCAAGGAAATGGTGTTCCAGTTACAGCGGGAATGCTACCTGAAGCATGATCTGTGCTCTGCCGCACAGGAGAACATCCGGGTGATGGTGGAGATGATTCACTTCAAGGACTTGCTGCTGCATGAACCCTACGTGGACCTAGTGAACCTGCTGCTGACCTGTGGGGAGGAGGTGAAGGAGGCCATCACCCACAGCGTCCAGGCTCAGTGTGAGCAGAGCTGGGGAAGCCTGTGCTCCATCCTGAGTTTCTGCACCTCGGCCATCCAGAGACCCCCCACGGCGCCACCCGAGCACCAGCTCCAGGGCGACAGGGCCAAGCTCTCCAGGGGCCACCCCGCGGAAATGGGTCACCACCTTGCGGAGCCCAGCAGTCGGGAGACCGGCCGAGGTGCCAAGGGTGAGCGAGGTAGCAAGAGCCACCCCAACGCCCACGCCCGGGGCAGAGCGGCCGGCCCTGGGGCCCAGGGAACTTCTGGAAGCAGCGAGTGGGAGGATGAACAGTCTGAGTATTCCGATATCCGGAGGTGAAATGAAAGGCCCGGCCGGGAAATCTTTTCCTCCACGCCGTCCATTTTCTTCTCTCTGGACATTCCAAAACATTTGCCATTAAAGAGGGGGGCGATCACTCGCAGGATGTGATGGGGATTGCGGACTTGATTGGAGCTGTGCTAGCGGCATGAACAGGTGAGGCGGAGGCTCCCTCGGCAGCGAGGGCTCGGTTGTGCCTGGTGTGTCCCGCACCCACACATCCCAACGGGAGGTCGTCCTCCTCGCAACTTTGCCTTCTTTCCATCCGCGGAGACCCTGGGCTATGGCTTGCGGCTCCCTTTTCCTTGGGAGGTGACGAGAGGGGAGGGGTGACCCGCGGGGGCCAGACTGTGCGCTTGGTGCTGGGCCCCGCCCCCAGCTTCTGTGCAGACAGTCCTAGCGGAGCGCAGCTGGATTCCGGCGCAGGAGTGGGTGTGCAATCTCCCTGGGAATCGGGAGAAGGGTGGAGCGGGGGCAGGGCCGTGTGGGTGCTTGGTGCCAAACAGAAATCCAGTTTCTTGCATGGGACCTTGAGGTTGGAATAACTTGGGACGGGGCGGGGATGTGTGGGGGCGGCGAGGATTCTAAGTGTAATTTCTGAGCCATTGTTCTGTCTAGGGGACCCTGCTGCAGGGAGTGGCCCCTGTGTGTCTGTATTTTAACCACTGCTTCGAGTCTCGATTTCACTTTTTTATTTATCCAGTTACATCTCCGTATCTGTCTAAATAAATAGCTTTCAAACAAGCAACTGGGTCATTAAAACCAGCTCAAAGGAAAGCAAAAAGCAACCCATCTTTGGGGGCTGAATTTTTTTTTTAAGTGCTATTTTTAAAGTAATCAAAAAGTGATGTAGCTTTATGTCTGACTGCCTGACATGGGCTCATTGCCACTAGCACAAAGCCCACCCTGGAAAAAATGCACACAGGGGTGCATTTGACAGAATTCCCTTTGCCTTTTGGTACCTCGCCTTGATCCTCAGCCAAGACGGACCCTGGTTCCATTGGGCCGAGTTGGAAAGCTGGCCTGTCCATGCTAGAGGCTGGAAAAGGGGAACACAGAAGGACTACTTGGTAATTTTCACCAGGGAATGCCGACCTTTTATGTAAACGGAGGAGACTGCTGCACATCACTGGGGGACAAGATTTCCCAGATCCAGAATGAAAATTTAGCAATGAGAAAAGGAGTCAGAGTGGACAAAGAAAAGCAGGGAGGAGAGACAGAACTGAGAATACAGGGAAAGGATTAGAACAGAAAGCACCGGCAATGGATGTCTTGTGGTTACTGAAGAGGTCTCAGAGGTAGGCCTTTTCTCTCTCCTGACAGAGCTTGTCCTTTCTTGCAGCCGGTACTCAAATAGGAGCCCAGTATTGCAAGGAATGGATGGATGTTCTGGGCCAGGTCCTTCTAGAACAGGGGTCAACAAACCTTGTCTGTAAAGGTCCAGATAGTGAATACACTGTTTTCAGTTTGGCAGGTTATATGGGTTTTGTTGCAGCTACTCAACTCAGCCTTTGTTGCCTGAAAGCAGAAACATACATAGACAACACATAACAAATAGGCTTGGCTCCACTCCATTAAGATTTTATTTAACAAGCGCCCAGCTGGATTTGGCTCTTGGGCCTGAGTTTGCTGACTGCTGTTCTAGTGACTGGGCAAAAAAGTATGCATCCTCCATTTATATCAACTCATAGCTCTCCCTCAAAGCAACCTGAGGCCAGAGATAAAGAGGCTATATTTATCTGCTAAAAAATGATTTGTTCCCAGAATGCCCTACCCAAAGCCCAGCTAGTGTTTAGATAACCTAAATCCAGCCTCACTGCTGCCAGGACAGGGTGCCAGAGCGCCGTTTTCCCAATCTCTCACGATGCATGTTGGAAAGAAACCATCTGTTGGGGGGAGGGGTACAAAAGGCTGGGAGAAGCACCTAGAAAGAGCGGGAGTTGCAGAAAAGAGATGTGCTTGATCCAGCTCTGCCCTCCGAGAGAGGAGGACCGGTGTGTCAGGCTCTGCCATGGCAACTGACCGTAAGCCATGGCGTCTGAAGCCACACAGCACGTGGACTGTTTTCTTTACATCACTCAAAAGCTGAAGCAATAACATTCTCTCGCGTTGCTGGGTCAGCTGCTCATTTGTTCGCCCGCTTCTGGGCTGGGTGGGTGAAAGGCATCACTTTTACATTTTCCTCAGTGTAAATGTTTTACATGTTCGCTACTGACGCCCCATGTGTTGCTTCTGTTGTAAATATTTGTCATTTGTATTTATTATCTCGGTGTTTTCCCCCGAGGCATAAAATTGCTTCCTATGTTGCTCTGAACCCCCTCATTGATCACTGTTGTGTATTTTTTCATGCCGCTGCTTTGTTTCTTCTCAAAAGTCAGGTAGAAATCCTTGCATTCTGGTTCCTAAAGTTTTGAAGCCTACAGTAGTATTTATTGCTGAGATTCTTTATCTCAAAACTGGGGAAAATCCAAATTCCTGTAAGCATGGACAGAGGCATTTGTACAGTCTAAAATGTAAGCAAAGTCGTCCTTAAAATTAGACCCTCCACTTGGGGCTTCGTACTTCATACAAATTTACTCCTGAGCCTTCCTTTGAGGAAGGATGTGGATTTCCAAATAAAGATATGATGTTTATTTTGAGCCTTGCATCTTAACAAGATGATCCGAACACCTCTCCTTTGTATCAATAAATAGCCCTGTTATTCTGAAATGAGAGGCCTTAGTAGAGTGAAATGCTGACACTCAAAACTAAATAAATAGAAAATGCTAGCCCAGAGCTGTAGCTGTACTTTCACACACAGACACACACACAGAAATTTCAGCTCGAACCTAGGAAAAGGCTTCGTTTAGAATAACATGGACAAACAACGCTTCCAGGGCCCGTTTTCCTAACGAAGAGCAGCCCTCGTGTGATCTCAGCATCGGCACCGTGATAAGTTATAAGATCTGTTTCTGTTAGGGATTTAGGCAGCAGGATCTGTACTTTGTCACATTGCATTATCTTTCTCCAAGCCTTAATAAAGGTTTTAAATAACTGA EMBV3_15050 CGGTGGGGTCTGGTACCTGGCTGTGCTTTGCCCTGTCATTACCAGTTTGGTCATTATGAA Gene GeneID:523966|CYB561D2:NM_001014937:208_cdna Constitutive 2 NULL GeneID:523966 22 GENE CYB561D2 MGC137791 cytochrome b-561 domain containing 2 EMBV3_28077 CTTCCTATTTGCCATGGGCTTCACTGTATAAATAGGAGAGGATGAGAGCCCAGAGGTAAC Gene BVT0102_252853 + 0 NULL GK000021.2:69590203-69638190 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181944 TCONS_00181940 TCONS_00125587 TCONS_00181939 TCONS_00181934 TCONS_00181935 TCONS_00182380 TCONS_00181933 TCONS_00181941 3 XLOC_110733 XLOC_077129 XLOC_110849 Coding TCONS_00182380 XLOC_110849 NonCoding NonCoding LOC100847254 4:94002019-94004241 = TSS136303 577 1 TCONS_00182380_1 49 2 0.741107609185052 0.000589501258591527 0.0010623126280381 0.000729735066197492 0.00182057540135291 0.00199796818373893 0.00136201182609495 0.00280973406156103 0.00187931200750009 0.00448862475361635 0.0129163329446116 0.00895309442965227 0.0072660234417548 0.00346352732637331 0.0127029235938456 0.00599961404358233 0.112519940448988 0.107809457222188 0.0776498261580213 0.0030759215297511 0.00190691390094217 0.000831274127266681 0.0514924892861148 0.0481769980411554 0.0580175190050737 0.00327811466074079 0.00228337319991635 0.00151302202337761 0.0131426331818459 0.00658921945359607 0.0115399733608907 XM_005198106.1 LOC101904796 PREDICTED: Bos taurus heterogeneous nuclear ribonucleoproteins A2/B1-like (LOC101904796), mRNA. 0.0 1023 100.00 0.980935875216638 XR_242075.1 HNRNPA2B1 PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1 (HNRNPA2B1), transcript variant X2, misc_RNA. 0.0 946 97.67 0.965337954939341 0 noncoding TTCATTGTATTGGAGGAAGTGGGGGTTATGGAGGGAGAAGCAGATAGTGAGCTGCTTCCTATTTGCCATGAGCTTCACTGTATAAATAGGAGAGGATGAGAGCCCAGAGGTAACAGAGCAGCTTCAGGTTATCGAAATAACAATGTTAAGGAAAATCTTATCTCAGTCATGCATAAATATGCAGTGATATGGCAGAAGACACCAGAGCAGATGCAGAGAGCCATTTTGTGAATGGATTGGATTATTTAATAACATTACCTTACTATGGAGGAAGGATTGTTAAAAAAAAACTGCCTTTGAGACAGTGTCTTAGCTTTTTAATTGTTGTTTCTTTCTAGTGGTCTTTGTAAGAGTGTAGAAGCATTCCTTCTTTGATAATGTTAAATTTGTAAGTTTCAGGTGACATGTGAAACCTTTTTTAAGATTTTTCTCAAAGTTTTGAAAAGCTATTAGCCAGGATCATGGTGTAATAAGACATAACGTTTTTCCTTTAAAAAAATTTAAGTGCGTGTGTAGAGTTAAGAAGCTGTTGTACATTTATGATTTAATAAAATAATTCTAAAGGAAAAAAAAAAAA EMBV3_00529 AACGTGAGCCAGGATCAGGATTTAGTTTTGCAAATGCCTGTTATTATTGCTGGAAATGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10905 AGCCTTGGAGCAGACAGAGGAGTATGTAAATGGACAGCTGAAGAATAAGTATGGGGATGC Gene GeneID:615916|LSM6:NM_001114519:28_cdna Constitutive 0 NULL GeneID:615916 17 GENE LSM6 MGC140676 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_11926 CGCCTGTGAAGCCATCTGTCTGGTCCTGAACTTTTGTTTGCTCGAAGATTTTCACTGCAG Gene BVT0102_198946 - 1 EMBV3_22057 GK000028.2:27185948-27226793 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16880 TCTGATCATCCTCATCATCTTCCTGGTCCTCTTCATCTATACCTTGCCGGGAGCCATCAG Gene GeneID:527366|FER1L6:XM_002692627:81_cdna Constitutive 0 NULL GeneID:527366 14 GENE FER1L6 NULL fer-1-like 6 (C. elegans) EMBV3_11908 TCACCCCCGAGCGGCTGCGTCCTCCAGTGGGGTTTGTGGTGGGTCATGCTGGTCTGCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41160 TCTACTAGTGTCTGCTTTGCTCATCGGAGGTGCGATCATGGCAGTGAGGCGCTGTCACAA Gene GeneID:506589|CIST1:NM_001075271:29_cdna Constitutive 0 NULL GeneID:506589 7 GENE CIST1 NULL intestine-specific transcript 1 protein EMBV3_03931 GTTACACTGAAGAAGCCCCCTGGAGCTCAGGTGATTCCTGACTCTGATGCACATCGAGCA Variant GeneID:515371|PDZD11:NM_001037603:56_cdna 235^291 1 EMBV3_02363 GeneID:515371 X GENE PDZD11 MGC133775 PDZ domain containing 11 EMBV3_09249 AGCGCGTCTTTACTCTCAAGTCATAGTAGGGGAATCTGGCCTCGAGACGTGTTGAAGAAG Gene BVT0102_313221 + 0 NULL GK000019.2:50258689-50322180 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033204 TCONS_00116087 TCONS_00217532 TCONS_00063807 TCONS_00222116 TCONS_00232767 TCONS_00186493 TCONS_00186834 TCONS_00098199 TCONS_00142473 TCONS_00229646 TCONS_00063805 TCONS_00230831 13 XLOC_019438 XLOC_070256 XLOC_131531 XLOC_038533 XLOC_135425 XLOC_142251 XLOC_112545 XLOC_112885 XLOC_058445 XLOC_086898 XLOC_139141 XLOC_038531 XLOC_140321 NonCoding TCONS_00230831 XLOC_140321 NonCoding NonCoding - 8:36080417-36081052 - TSS172335 635 2 TCONS_00230831_2 66 1 0 2.32118134169466e-05 2.73157170574925e-05 4.53389407315719e-05 1.52989927116785e-05 6.28233070352316e-05 5.68642313448765e-05 2.60462785927587e-05 3.91209599969666e-05 4.47997133949065e-05 3.17646886927298e-05 2.28433499751437e-05 2.8555819151373e-06 8.91729721335297e-06 7.85648556834107e-05 2.61900081732579e-05 0.000617443879425 2.44023064558865e-05 8.52190192340281e-05 0 4.86350636891287e-05 2.78872946613185e-06 1.5377831117423e-05 2.12062507685331e-05 0.000109597533698809 7.72861743272504e-06 3.87621492584618e-05 1.15337587727392e-05 1.66388393800133e-05 5.13523818854627e-05 2.55454417945157e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-22 111 77.12 0.237795275590551 0 noncoding 1 1 1 1 0.0538091718035251 0.6809998483366 -1.02613056179786 0.00497382998682155 CTGGAGATGAGGCCCTCTTTCAATGCACCAAACCCCGTGGAGTCCCGAGAGGCCCCTACCACCTCCAGGTTCCCTGAATTTTCAGAGCCACCATGAGAAGCCCAATGAGGTCACCTGCACAAGTCGAGGGAAGCCAGGGTTTCCTGCCTCAACCCGAGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGACTCGAGAGCAATGACGCGCTCCCCCTCGCCACTCGCATGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTTCCTCGTGAGAAACCGCACCCTGGGGCCGCCGCTCGAGAACCACCCCGAGACTCCCCCGTCATCGCGGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGAGGCCAACCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAACCCCGAGATCCCGGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTAT TCONS_00224944 . 5' 142179 TCONS_00224944 . 5' 142179 EMBV3_07422 ATTCACATAAACCACTCAAGGAGGTAAGAAATGGGAATAAGGAAATGACATTTCTCTTCA Gene GeneID:505168|ANKS4B:NM_001075192:323_cdna Constitutive 1 NULL GeneID:505168 25 GENE ANKS4B MGC138951 ankyrin repeat and sterile alpha motif domain containing 4B EMBV3_02772 GTACACCAGGATTCAGAGCACCAGAGGTCTTGACGAAGTGCCCCAATCAAACTACAGCAA Gene GeneID:516094|CDC7:NM_001037468:141_cdna UTR3_Alt 3 NULL GeneID:516094 3 GENE CDC7 CDC7L1 MGC128732 cell division cycle 7 homolog (S. cerevisiae) EMBV3_12420 ATACCAGGAGGCCCAAGAATGCCTGACTCTTCTCTCTCAGCGCCTGGGCTCTCAGAAATT Gene GeneID:664655|MTX1:NM_001040608:242_cdna Constitutive 1 NULL GeneID:664655 3 GENE MTX1 NULL metaxin 1 EMBV3_41391 CAGAAGTACGCTGAACGAGATCTACTTCGGGAAGACAAAGGACATCGTCAATGGGCTGAG Gene GeneID:338052|CAPZB:NM_176648:54_cdna Constitutive 0 NULL GeneID:338052 2 GENE CAPZB NULL capping protein (actin filament) muscle Z-line, beta EMBV3_40085 ACTCAACAGGTGGAGGCAGGGGTGGGCAATAAAAGAGGAGGGTGACTCTGTCCCTGTATA Gene GeneID:509232|NRF1:NM_001098002:161_cdna Constitutive 1 NULL GeneID:509232 4 GENE NRF1 NULL nuclear respiratory factor 1 EMBV3_23806 CTCAGAGAGGAATAGGCCCATAATCACACCTATGACCTTAATGAGGACTATCATCGGCTG Gene BVV0102_202368 + 0 NULL GK000010.2:99484914-100092611 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023453 1 XLOC_014120 NonCoding TCONS_00023453 XLOC_014120 NonCoding NonCoding - 10:99853830-99854399 - TSS17343 569 1 TCONS_00023453_1 46 1 0 0 0 0 0 0 0 0 0 0 0.000318167891702262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding CTGTTCCTAGAGAAAAACCTTCTGGGATATCACTAAATAAATTGCTTTCGCTTCACATGGCCCTGGCCAGCTTGTTGCCTACCCCTGGCCAGGAATGTTTGCCAGGCTTGCTGCAGAGAGGCGAACACAGAGTGACAGGCCAAGGAGAATTGGCACTGGGTAGATTCCAGAAATTTCTAGCTGGCTTTGTTTTTTAATCACCACTTAAAATTTCAATAATAGTATCTTTAAATGAGTTTTAATGATGTTAGTAAACATATTCATAAGCATTCAGAACTAAAATAAGGAGAAACTTGTAAGTCACCGACTAAATAAAAATTGTTTGCCTTTTTTTTCTTCTTCTTTTTTTTTTAACAGCTGCAGTTTCTAACTATCCTTCTCTACAGGGGTCAAGAGACCAAAATTTAGAATCTCAGAGAGGAATAGGCACATAATCACACCTATGACCTTAATGAGGACTATCATCAGCTGGAGAATGATAGAGGGAACACGTAACAAGATCGGACTTTCCTCGACATTCAGCAACCTTTCCTAAATAAAATTATTATGCCATGTCCAATTCATTTCTC TCONS_00018502 TCONS_00018496 TCONS_00018497 TCONS_00018498 TCONS_00018499 TCONS_00018500 TCONS_00018501 TCONS_00018503 . 3' 877510 TCONS_00018502 TCONS_00018496 TCONS_00018497 TCONS_00018498 TCONS_00018499 TCONS_00018500 TCONS_00018501 TCONS_00018503 . 3' 878078 EMBV3_25224 CCTCAATCTCACCCACTGCCACTCACCTGTTCATGGGGCTTTCGAGGAAACAAGAAATGA Gene BVV0101_040364 - 1 EMBV3_31322 GK000009.2:47224632-47461005 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22933 CTCAGCAACTAGAACAAGCATCAGCCGTGAATTATGGAAACCTACTGAATGGGGCATCCC Gene BVV0102_117370 + 0 NULL GK000005.2:22529174-22761706 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19112 TGGAGTTTGGTTGTGATTGTATTGAATGTTGGGTGGCTGCTCTCTGCTTCTTACCCAGCC Gene GeneID:615553|RMI2:NM_001099720:273_cdna Constitutive 0 NULL GeneID:615553 25 GENE RMI2 C25H16ORF75 chromosome 16 open reading frame 75 ortholog EMBV3_11172 GACTTACTTTGGGTCTTAACAGCTGCTTTCTTGGCCTCCAAGTGTAGGGACTCCAGGGAG Gene GeneID:508167|RRM2:XM_002691481:368_cdna Constitutive 3 NULL GeneID:508167 11 GENE RRM2 NULL ribonucleotide reductase M2 polypeptide EMBV3_11062 TTCCTGTCACCTGTTTTGTCTTATTCTTCCCTGGTCCCACCCTGGACCTTCCTTCAAGAC Gene BVV0102_222650 + 0 NULL GK000007.2:62230993-62392121 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33276 TAAAAATTGTAACCCCCCGGCTGTTCCTTATCTGGGGATGTACCTGACAGACCTGGCGTT Gene GeneID:524957|RASGRF2:XM_002689373:23_cdna Constitutive 0 NULL GeneID:524957 7 GENE RASGRF2 NULL Ras protein-specific guanine nucleotide-releasing factor 2 EMBV3_37122 TCCCGAAAAATCCTGACCAACGTGGTGACCTTCTAATAGAATTTGAGGTTTCCTTCCCGG Gene GeneID:541274|DNAJB4:NM_001046503:86_cdna Constitutive 0 NULL GeneID:541274 3 GENE DNAJB4 MGC137330 DnaJ (Hsp40) homolog, subfamily B, member 4 EMBV3_37318 CAAGTGCAAAGCCACTTCAGTGAACACAGAGGAACAGATCCGGAGAGAAGAGCTGCTGAA Gene BVT0101_012574 + 1 EMBV3_01054 GK000024.2:29230447-29489775 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138722 1 XLOC_084718 NonCoding TCONS_00138722 XLOC_084718 NonCoding NonCoding - 24:29342082-29344413 - TSS103898 1414 2 TCONS_00138722_2 66 0.591937765205092 2 0.393991416309013 0.000673548883040258 0.000120808709656695 0.000539925643250882 0.000393478043406568 3.14247101013589e-05 1.01189665060863e-05 4.12426033508537e-05 5.43786433764032e-05 0.00118389283561493 2.61884354624157e-05 0 0 5.27592661229665e-05 9.98022356814441e-06 0 0 0 0 0.00057949009652524 0.000745928091753068 0.000990619947189167 0 0 0 0.000650872571428329 0.000176884039249149 0.000555252561671282 0 0 0 XM_005197460.1 LOC101908419 PREDICTED: Bos taurus secretory phospholipase A2 receptor-like (LOC101908419), mRNA. 2e-119 434 85.23 0.269448373408769 0 noncoding 0 0 0 0 -0.502892954070474 0.0364433404218725 0.0814293820209034 0.165583780181644 CCAGGTGGCTCAGTGGTAAAGAAACTGCCTGCAATGCAGGAGACACAGGTTCAATCCCTGGATCAGGAAGATCCCCTGGAGAAGGAACTAGCAACCCACTTCAGTATTCTTGCTGGGAAATTCCATGGACAGAGGAGACTGGCAGGTTGCAGTCCATGGGGTGACATGACTGAGTGACTCAGCAACAAGAACACAGCAAGGCCACTGTCAGAATTGGCTTCTTAAAATGTCAAGTGACGGCCCCGACATCAGTGGCATCGGAGGCCGCTCATTACTTCAGAATAACAGCAGCGCTTACCAGTCTCTGCTCTGAGTCTCTGCCCACCCGGCTCCCACCAGTTACCTTGACTCACCCGGCCCCACTGGACTCGTTCCCGGAAGTTGGTCACTGCATTATTCAGCAGCTCTTCTCTCCGGATCTGTTCCTCTGTGTTCACTGAAGTGGCTTTGCACTTGGTGGGGTGGGTCAGGGGAGGAGGCAAATATGAAAAGGTTTTATTTTTATTCAATTGTCACTTTAAACTGTGTTCTGCAGACTTGCTCCTTCATCCCCTGATACCTGGAACAGCGGTCCATTCACTGGCCTCTGTTAAAATCCGGGCCACTGTGCTTCAGAACTCTTGTCATGACTCTCTTTTTGGTTCAGGAGTGGTGCTTGACTCTAGGGAGCTCCACGTGCTGTGGGAAGGGGAGTGGTCTTCTCCATCTCTCCCTCCCACCTTCTCCCTCTTGGAGCTCCCCTGGGGTTGTGCCCTGGGTGAGAGGACCAGCCAGGTGGTGGGAGGAATTTCCTCAGCTGACCCACCTGCAGCTCATCCTCTCTTGATGTCCTGTGTGATCTCCGTGACCTGTCATTCACGTGCTGCTCTCCTCAGGAGGGAACTCTCCATTATGTGATTTCCCTCTTCAGGAGGGCAGGGTGCCATCCGCCTCCAGATGCCCTTTGTGAAAGAGAGGTCGTCTCTTACATGAACCTCTAAGCCTCTTCAAAGCCCTGGAAACCATGCTTACCAAAGATGGTCATTAACCTAGAAACTGATTCGGTTCAGTCACTCAGTCCTGTCTGACTCTTTGTGACCCCACGGACTGCAGCACACCAGGCTTCCATATCTATCACCAAATCCCGGAGCTTGTTCAAACTCATGTCCACTGGGTCAGTGATACCATCGAACCATCTCATCCTCTGTCATTCCCTTCTCCTCTTGCCTTCAATCTTTGCCAGCATCAGGGTCTTATTTTTCAAATGAGTCTGTTCTCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTTATTCGAATGAATATTCAGGACTGAGTTCTTTTAGGATTGATTGGTTTGACCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCTAAAGTGTCAATTC TCONS_00138720 s 3' 100188 TCONS_00138720 s 3' 100188 EMBV3_00765 TTTCGCAAGACATGCAGTATCAGGGAGAGTATGCTAAATGTCACCACCAGAGGGCACCAC Gene GeneID:534962|TBC1D8B:XM_002699881:116_cdna Constitutive 0 NULL GeneID:534962 X GENE TBC1D8B NULL TBC1 domain family, member 8B (with GRAM domain) EMBV3_33718 TACTCGCCAGAGTCAGGAGGATCAACACAGGATTAACTATGAGGAGAGCATGATGGTGCG Gene GeneID:539602|NGDN:NM_001046459:234_cdna Constitutive 1 NULL GeneID:539602 10 GENE NGDN MGC137193 neuroguidin, EIF4E binding protein EMBV3_20736 AATGCAGGAGTATAGTGCCCCCAGTGTAGACTAACCATACAGGTCCCACCAGCCTCTCTA Gene GeneID:767827|C1S:NM_001076550:82_cdna Constitutive 0 NULL GeneID:767827 5 GENE C1S MGC139966 complement component 1, s subcomponent EMBV3_15096 AATTCGTATTTACACCCCAGGAGCGCTGAGGTGAGAAGTGCAAGTTGGGTCTCGGAGAAA Gene BVV0102_176284 + 0 NULL GK000005.2:118347376-119524716 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41964 AATTTCACCTTCCAATGCAGAGGGTATGGGTTTGATCCCTGGGTGGGGAGTCAAGATCCC Gene BVV0102_368642 + 0 NULL GK000005.2:84910150-85167437 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39285 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22205 TATCTGCTTGGAGATGATACAGAAAGGGCTATTTCCTCACAGCTCATGCTCACAGAACCC Gene GeneID:616694|NSDHL:NM_001035482:112_cdna Constitutive 1 NULL GeneID:616694 X GENE NSDHL MGC127609 NAD(P) dependent steroid dehydrogenase-like EMBV3_40567 AAGCTTTGTCTGCCAATGTTGTGTTTTCTGCTTCACACCATACTGCATAGTACCGGTCAG Gene GeneID:504823|NUP107:XM_002687393:92_cdna Constitutive 0 NULL GeneID:504823 5 GENE NUP107 NULL nucleoporin 107kDa EMBV3_01106 ATTATCGACGCCACCAAGTGCGGCAACTTCGCGCGTTTCATCAACCACAGCTGCAACGTG Gene GeneID:514102|SETD1B:XM_002694575:633_cdna Constitutive 0 NULL GeneID:514102 17 GENE SETD1B NULL SET domain containing 1B EMBV3_40479 GAATCCTCCCGGTCTCTTCTGTGATTCCTGTCTGTCCTTGTTTCTGAGTATTAATCTGCC Gene BVV0102_132820 + 0 NULL GK000007.2:63298307-63311553 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213882 TCONS_00213886 TCONS_00213883 TCONS_00213884 1 XLOC_130563 Coding TCONS_00213882 XLOC_130563 Coding Coding SLC26A2 7:63280881-63301727 j TSS160118 5918 1 TCONS_00213882_4 734 4 0.716286879347565 2.20193852280815e-07 3.46443831159802e-10 0.000210497654229197 0.000132152116085431 4.76904156059135e-11 5.07747646292142e-08 9.15093131670091e-05 9.70664249328802e-05 5.71661184994756e-05 0.000138436265721616 0.000297621395037775 0.000198641219417069 0.00032046371886166 0.000206956053012413 0.000125376432036626 4.22609674904169e-07 0.000135356347435224 0.000364609833795955 5.78671841030118e-05 0.000228287672803336 1.20122482524997e-07 0.000275616490282418 9.99793891957596e-05 0.000406422709135596 0.00014346660880224 1.13193861705782e-07 9.09518074952219e-05 0.000150447532154492 0.000144306372329642 0.000170357312696226 XM_005209573.1 SLC26A2 PREDICTED: Bos taurus solute carrier family 26 (sulfate transporter), member 2 (SLC26A2), transcript variant X1, mRNA. 0.0 1.067e+04 100.00 0.999831023994593 NM_000112.3 anion exchanger Homo sapiens solute carrier family 26 (anion exchanger), member 2 0.0 3153 82.22 0.528894896924637 TCONS_00213882_4 sp|Q9BEG8|S26A2_BOVIN S26A2_BOVIN Sulfate transporter; 0.0 1511 99.86 0.998637602179837 3 coding 0 0 0 0 -0.123824824806742 0.406659920100858 -0.012425917030696 0.786928680568296 CCGCTCGCGCCACGCTACCGCCTCAGTCCCGCCACGGCGGAGGACGCGCCTTGGAGCCGGGTCGCACGGTACGGCAGAGACTCGAGAGGTTTGGAAAAGCCTTTTGACCCAGAAATCACTAAGAGCTATTCCAAAATAGAATGATGTAAGGAATGCACTCAAGCAAGCTTGGCCTGAAAGTAGAAAGTGAGAAGAAAGGTATGGACCAGTTGCATTGAGGGATGAAGAGCTGCTGTGTGTTTTCATCAGTCTGATTGACTTGCTCAGGAGGCTGAAACATCTGTCTCCAGAAATGTCTTTGAAAAATGAAGATCAAAATGACCTTTCACCCAAGGACTCAGTTAAAGGAAATGACCAGTACAGAGCTCCATCTGGGATCCATCTGGAGCCTGAAGAGGAATCACGTAATGACTTCTGGCAGTTTGAGCCCAGTAATCTTTTTAGACACCCTAGGATCCATTTGGAGCCTCAAGAGAAATCAGATAATAACTTCAAGAAGTTTGTTATCAAAAAACTAGAGAAGAGCTGCCAGTGCAGTTCAACCAAAGCCAAAAATACCATTTTTGGTTTCCTTCCTGTTTTGCAGTGGCTCCCAAAATATGATCTGAAGAAAAACATTTTAGGAGATGTGATGTCTGGCTTGATTGTGGGCATCTTATTGGTGCCCCAATCCATCGCTTATTCTCTCTTGGCTGGCCAAGAACCTATCTATGGTCTGTACACATCGTTTTTTGCCAGCCTCATTTATTTCATTTTGGGTACCTCCCGTCACATCTCTGTGGGCATTTTTGGAATACTGTGCCTTATGATTGGTGAAGTAGTTGACCGAGAACTATACATAGCTGGCTATGACACTGTCCATGCTGCTTCAAATGAGAGCTCATTGGTAAACCAGATATCAGACAAGACATGTGACAGAAGTTGCTATGCAATTATAGTTGGCAGCACTGTAACCTTTGTGGCTGGAGTTTATCAGGTAGCAATGGGCTTCTTTCAAGTGGGCTTTGTTTCAGTCTACCTCTCCGATGCCTTGCTGGGTGGATTTGTCACTGGTGCCTCCTTCACTATTCTTACATCTCAAGTCAAGTACCTCCTCGGACTCAGCCTTCCTCGGAGCGCTGGAGTGGGATCACTCATCACTACTTGGATACATGTCTTCAGAAACATCCGTAAGACCAATATCTGTGATCTCATCACCAGCCTTTTGTGCCTTTTGGTTCTTTTGCCAACCAAAGAACTCAACGAGCGCTTCAAGTCCAAGCTTAAGGCACCGATTCCTGTTGAACTCTTTGTTATTGTGGCAGCCACATTAGCCTCTCATTTTGGAAAACTGAATGAGAAATATGGCACCAGTATTGCTGGGCATATTCCCACTGGGTTTATGCCACCCAAAGCACCTGACTGGAACTTAATTCCTAGAGTGGCTGTAGATGCAATAGCTATTGCTATCATTGGGTTTGCTATCACTGTATCACTTTCTGAGATGTTTGCCAAGAAACATGGCTACACAGTCAAAGCTAATCAGGAAATGTACGCTATCGGCTTTTGCAATATCATCCCTTCCTTCTTCCACTGCTTCACTACTAGCGCAGCTCTTGCAAAGACACTGGTGAAGGAATCCACAGGCTGTCAAACTCAGGTTTCTGGTGTGATGACAGCTCTGGTTCTTTTGTTGGTCCTCTTGGTCATAGCTCCTTTGTTCTTCTCCCTGCAGAAAAGTGTCCTTGGTGTGATCACCATTGTAAATCTCCGGGGAGCCCTATGTAAATTTAAGGATCTGCCCCAGATGTGGAGGATTAGCAGAATGGACACAGTTATCTGGTTTGTTACTATGCTGTCCTCTGCACTGATCAGTACTGAAATAGGCCTGCTTACTGGGGTTTGTTTTTCTATGTTTTGTGTCATCCTCCGCACTCAGAAGCCAAAGGCTTCATTGCTTGGCCTGGTGGAAGATTCTGAAGTCTTTGAGTCCATGTCTGCCTACAAGAACCTTCAGGCCAAGTCAGGCATCAAGATTTTCCGCTTTGTGGCCCCTCTCTACTATGTAAACAAAGAATATTTTAAGTCTGTCTTATACAAAAAAACTCTCAACCCAGTCTTAGTAAAAGCAGCTCAGAGGAAGGCAGCAAAGAGAAAGATCAAAAGGGAAACAGTAACACCCAGTGGAATCCAGGATGAAGTTTCAGTGCAACTTTCCCATGATCCCTTAGAGTTCCATACAATCGTGATTGACTGTAGTGCAATACAGTTTTTAGATACAGCAGGGATCCATACACTGAAAGAAGTTCGCAGAGATTATGAAGCTGTTGGCATCCAGGTTCTGCTGGCTCAATGCAATCCCTCTGTGAGGGACTCCCTGGCCCGGGGAGAGTACTGCAAAAAGGATGAAGAAAACCTTCTTTTTTATAGTATATATGAAGCCATGACTTTTGCAGAAGACTCTCAGAATCAAAAAGAGAGACATATTCCCAATGGTCCGAATTTTTCCAGTGATTGATTGAGAAGGTAGATGGAAGGAAGAATCCTGTCTAGCCAATAGATTAAAATTTCAAGTGTGTAGCATCTTATACTGTGGAACTGGAAATTGCTGCACACAAGAAATTTTAACCTTTTGGCTAGGCAGAATTCTTCCTTTGAAGTTGATGGCCTTTGTAAATACAGAAATGCAACAGAGCTTTTAGTTAGGCAGAATCAAAAAAAGAAAATGTGGTTTCAAGTTTTCTCTCAAATATGAGATATTCTTGGAATTAAATATCTGTTGAACTGTAAATTAGCCCCAAACCTAATTACCATCCTGTTTTAGGAGATATGCATCTGAACTCTTGCTTCTCCAGGAGGTAAAGGGGTAAAGCTGGCATGTACATAAGAGGTGCTGGAGCCTGTTTGGCATGGCTCTTTGGAGAGAGAGGAGAAAGGAACTAGGGAAAGAATGTATGTCTTCTCTTGTAACAGCAAGTCAAGAGGCTTCTGGAGTGCAGGGTAGTAACTAGACAAGCTTGTTCTCACTTGAGCTTCTCTATCCCCTGTCTTTGCTCTCCAGATGGCAGTCAGATCTCTGGCTTTTTACAGGAAAGTATCGTTCCTCTCTGGCACAGTCTTATCAGGAGTCTGATGGCAGAGCAGGTTTGGGAAACCCTACCAGTCAGTCCCACATTATACAGAACGCTCATGGTGTGATACAGTTGATGTTTTTAGTCAGCCTTTTTGTTTAGGGTAAGTAGGTGAGAAAAGAGCTCTCCATGCCAGTCAACATAGTGAGAATCCTCCCTGTCTCTTCTGTGATTCCTGTCTGTCCTTGTTTCTGAGTATTAATCTGCCATTAAGCTCTGTTTTAACTTTCATGTACTGTGTTTCCCATGGAATCTGTTCTAAACCGCTATGTTTGATTGCCAGTGAGTGACAAGTTTGCCAGAGAAAAGGCACAGTGCTGACTTAGCAATTTCATGTAGCTTTTTAAGTGACCTTGAGGCAAACTGTTCCAGACAGATTGCAAAAAAGGAATGATTGACAACTTCCCTTAAACATTTTTAGTAGTGAATTTTTCTTTCCTTCCCGTGTTTAGCAAGAGTAAACTGGGAATTGACAGTCTTTCTCATATTTGAGAAGCTACTATTCATTTTTAATCTGTAAGAAAAAATTTATTGTGACCAATGGAGAAAAATGCACAGAAGTGACAGAATGCTTCCAAAACAACCATCAATAATTGTCGATGTTTTAGTGAAAACAAAACTAATGCTCACTGCTACGCACCCTGTTGATGTGTAATAAATACTGATGACAGTGACCACTTTTCGCTTTTTGGGCCACCTAAAACCATTGTGTAAAAGGATTTAGAAGCATCATCTTCATACAACATATTTTCTTTGGAAAAGTATGTCCAACATTGAAAGCTTATAGTTCTGTATCTGGACCTTTATGGGTGAGGGAAAAAACCAGATTTTCCAAACTTTGGATTAGGAGACTGGTTTATATGAGACTGAAACATTTAGCACACCATTTTAAACAAACAAGATAAAAACCACGAAAGTGCAAAATCATTTTTAACCCATCCCTACATTCTAAACAGTATGTTTATGAGAAACAAACCCTGTGTATAGCACATCTACTGAAATGGGAGACTTTTAAACATCTTTCTTGTTGGCTCCATAAACTGCAAGTGTTGATTTTCTTTTGAGAGAGCTCTGCCCATCAGTTTACATGAAAAATGCCTTCCTATCATTAAAGCAGTTTCTCAGGAGCTAGATTTCTCTCTTTGAGGTGATTTACATCACGATTAAATGTAATAGTGTCCTTAGAGTTTTGACATCCATTTAGAACTTAAGTCTTGAATTTCAGAAATGTTAACTGCTGTTTGTATTTGTGTCTCTTTTGTTTATTGTTTGTAACAAATATTTGCTCTGTCTCTCCAGTCTTAGATGAATAGGAATAGTAAAATCAAAGTATCTTGGTTGTCATTTGTTTTCAACCCAGTCTTGTACCTCACCCGAGCCAAGTTTTGAATCCAGATCATGGTAAATACCTAATGCCATGTGACAGAGTAATGAGTACATGTTCAAGATGACTTTATAGTTTAGCAAACCTTACCATGGGGGAATTAAAAAAAAGAGTCCAAAGAATTTAGAAAATCTCTTAAAAGAACAGAATAACAGGCTTTGACCTTTACCTCCCATTTCTGTCCAAAATGTAGATATAAACAATTCTGGAACTTTCTGCAATTAGCAGATTCTTGAATTGTGTTCTGGTTTGCTTTTCTCCTATCTACCCGAACAAATAAGACATTCTGCTTTTGGAAGCCATTTGTAAAAAATACTGAAGATACACTAGAATTTAAATCTTACCTTGTCTGCTTGGTTTGAAATCTGCCTGTACTTTCATGTTAAGATTTTTTGATTGCTGGTATTTAAAGGAATCAAGCCTGAAACCAAAGCCAAAGGAATCTGCTTTCTTGCTCAAAGGTTTGGTTGATTTAGTTGATTAGGTGATATTTTATACACTTTATTGACACAAAATGTCTTGTTTACTCTGAACTTTAGAGTCTAACTGAGGCATATTTGTATTGCTTATTGATGAATGTACAAAATTCTGAATATCTTAAAATGGTCATTTAATTGAAATGTATGTACACTCTTGATGGTTAAAACTCATACAACCAGAGGGGTAGAGTTCACCTAGAGTCAAAGGGTAATATTCAAGAGAGAGGTGAAGGGGAATAGACTATTAAAAAGATGATCTCTGAGCAAGCAAGGGAGAAGAGGGCCTCAGATGAATAGGATTCAACCCCTGGTTAGCTTCATACATGACTGTCCATAGTAGGGAGACCAGGATTAAGAGCCACAGCTTAGTCTGAGAGCAGACTCAGAACTGGATTCTGCTTCTAGAAGGGGAGTGCACAGATTCACCAAAGTGAAAGAGCTGGTAGCCAAGGTTGAGGCCAAAGCCGAGGTTGACCTACTGCAGAGCTCTAGACTGAGTGACTGTTGCCTCTGATAGCAGTAAAACTGACAGATGTCTAATTGACTTTTTTAAGGAGCAAAGGAAAACAAAATTTGGATAAACTGACATAGCTTTTAAACATCAGTAGACACTGAAGCCAAAATTTACTGGTAAATTTATAGCGTGGTAAATGGTGATCTTTAAATGGTGTCAAAATATTAGATGAATTCATTAGACTATTCTAATGCTCATGACCACATTTTAACAAGAAAAGTAATTCTCTGCAGGGGTATTCGGTTAGTAATTTGTCACTTAAGAACACGTGGGGTGTTAGCCCTGAGCTTAATATAAAAGTGAGAATAGGGTTGTAGTGAATTTTGGGGGGACTTAAACCTAGAAGTTATAATGATAAATTCAAGCTTTGTGCTCCGTATTCATGTTCTTGTTTTCCTCTATGTATTCCTAGAGATGAGCCGTGTAGACAG EMBV3_27008 GAGAGACACACTCCTGCACTCACAAGTTACCACAGGGGTGGGGTTACTTTCTTCAAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30157 ATCCAGCAGACGACATACACGGCCACAATGGCTCCTGCAGGACAGACCTGCAGGGTGGTG Gene GeneID:100297562|LOC100297562:XM_002691527:555_cdna Constitutive 0 NULL GeneID:100297562 11 GENE LOC100297562 NULL hypothetical protein LOC100297562 EMBV3_17961 CTCACAAGACTTTCAGGATCAAGCGATTCCTGGCCAAGAAACAAAAGCAGAATTGTCCCG Gene GeneID:100296524|LOC100296524:XM_002691340:514_cdna Constitutive 0 NULL GeneID:100296524 11 GENE LOC100296524 NULL similar to ribosomal protein L39-like protein EMBV3_19375 AGCGGGGACAGCGGCGGCTCCGCCTACGTGCTTCGGAAGGAATATGGGGCAAATGTGCTT Variant GeneID:529972|SNX17:NM_001015638:165_cdna 126^200 1 EMBV3_02633 GeneID:529972 11 GENE SNX17 MGC139637 sorting nexin 17 EMBV3_17977 CAGGATGCCATCATAGAGAAAAGCCTCACACATAGGCAGAACTACACTCTAAACGTGCAG Gene GeneID:515490|LOC515490:XM_002684731:125_cdna Constitutive 0 NULL GeneID:515490 1 GENE LOC515490 NULL similar to Cdc42 GTPase-activating protein EMBV3_03364 CCTGTTTTCCTTCTAATGAGAAACCCGTGAGAACTAAATCTCCTATGGGCTATGAGGCAG Gene GeneID:533156|DAPP1:NM_001076891:14_cdna Constitutive 2 NULL GeneID:533156 6 GENE DAPP1 MGC142363 dual adaptor of phosphotyrosine and 3-phosphoinositides EMBV3_42480 TCTCCTGGGCTGTGGCGTTCCTACTTCACCACCCCGAGCATCTTCAGCTACGACATCCTT Gene GeneID:281741|CYP21:NM_001013596:33_cdna Constitutive 0 NULL GeneID:281741 23 GENE CYP21 NULL cytochrome P450, subfamily XXI (steroid 21-hydroxylase) EMBV3_22946 CAGCAGCTTTGAGGATGATCCCTTCTTCTCCATACAGATGTCAGCCCCTTTCAGGCAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11476 ACAGTGGGGTTTATTGTTCTAAAAGTTGTTGGGGGTCCACAGGAATAACAGTTGCACAGG Gene GeneID:317659|DNAJC6:NM_174836:19_cdna UTR3_Alt 2 NULL GeneID:317659 3 GENE DNAJC6 NULL DnaJ (Hsp40) homolog, subfamily C, member 6 EMBV3_15456 AACCATGTGAAGTGCGTGGAGGCCTTGCTGGAGACCCTGGAGGTGGAGATCCCAGTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41568 CCCCTCTTACCAACGCCATGGCAATTCCAGCTGGTCACCTGACTTTTGAATGCCGCAATT Variant GeneID:614029|SFRS12IP1:XM_002696298:44_cdna 189^236 1 EMBV3_26983 GeneID:614029 20 GENE SFRS12IP1 NULL SFRS12-interacting protein 1 EMBV3_15811 ACCCCCACAAGACCTTTGACCCCTTGCTGAAGCCAAAATACGCAAAGTGTGATCAGTGTG Gene GeneID:617998|DUS1L:NM_001078084:141_cdna Constitutive 0 NULL GeneID:617998 19 GENE DUS1L MGC151810 dihydrouridine synthase 1-like (S. cerevisiae) EMBV3_43037 GAACTGGATCCGCCAGGCCCCAGGGAAGGGTCTAGAGCAGATGGGATGCATGTATTATAA Gene GeneID:100299578|LOC100299578:XM_002683640:4_cdna Constitutive 0 NULL GeneID:100299578 7 GENE LOC100299578 NULL hypothetical protein LOC100299578 EMBV3_30798 AGGAACGACCACAGGAGCAGATGTGGAGACCAGAGAAAGTGCAGAAGCAAAGATAACCCC Gene BVV0102_456560 + 0 NULL GK000002.2:22889959-23299146 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43111 ACATGAGATGTTTGCTCACATGTTCCACCTGGAGGCTAAGTCCACCCCTACAGAAACCAG Gene GeneID:100336853|LOC100336853:XM_002686131:195_cdna Constitutive 0 NULL GeneID:100336853 3 GENE LOC100336853 NULL adenosine monophosphate deaminase 1 (isoform M)-like EMBV3_03221 GTCTTCATCTTGGCCCGAAACACATTTCTTACTGCACCTATTCCCATCCTCTCTGCACGG Gene GeneID:613962|LOC613962:XM_002693182:157_cdna Constitutive 0 NULL GeneID:613962 15 GENE LOC613962 NULL similar to olfactory receptor, family 56, subfamily A, member 3 EMBV3_11713 ACTCCTCAGACCCTCAGTGTTCTCATCTGTGAAATGGGTTAGCAGCCCTGCCTGTCCTCT Gene BVV0102_044007 + 0 NULL GK000008.2:112164793-112194563 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23521 CTTCGTGGGCCGCATCCTTGACTGGCATGTGGCCAGTGACCTGGAGAAGATCCAGCTGGA Variant GeneID:513453|TALDO1:NM_001035283:272_cdna 650^895 5 EMBV3_37082 GeneID:513453 29 GENE TALDO1 MGC133714 transaldolase 1 EMBV3_09770 CCTGATCACATTTATGTCTACGTCTATAAGCCCACGAGCATCTTTATAGTCAGAGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_19423 CTCTTCTTTGGTGCTAAATACCTTTAGGAAACCCCACTGCAGGCAGATGACTCGCTCGTG Gene GeneID:100125235|CCDC96:NM_001103314:28_cdna Constitutive 0 NULL GeneID:100125235 6 GENE CCDC96 MGC148702 coiled-coil domain containing 96 EMBV3_06791 CCCCAAGGGCTGAAACCTAAAAATAGCAACAGTAAGGTCTTTAATATGCAGGCTAGGCCC Gene BVT0102_139276 - 1 EMBV3_11962 GK000026.2:35047842-35050364 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150914 TCONS_00152222 TCONS_00150916 TCONS_00152229 TCONS_00152226 TCONS_00152225 TCONS_00152228 TCONS_00150913 TCONS_00152223 TCONS_00152224 TCONS_00152227 2 XLOC_091974 XLOC_092283 Coding TCONS_00152229 XLOC_092283 Coding Coding AFAP1L2 26:35047930-35192160 j TSS113581 6220 1 TCONS_00152229_4 761 0.0932475884244373 19 0.957005872605371 0.000930587319082688 8.69617670683702e-05 8.22770118261439e-05 2.9563256395269e-05 4.99474948027451e-05 8.88284234766305e-18 3.05331254569984e-05 0.000248186045848635 3.25848730988717e-17 2.94979621520626e-06 1.37617325484988e-15 0 2.02650056911255e-14 6.76647438280048e-05 5.91996285801612e-05 0.000230999199460356 2.53816419251442e-44 0.000106430029781887 0.000226411878580198 8.1007359906299e-39 1.11125594660447e-14 5.58217681710229e-06 0.000713514494859596 4.39202565278619e-08 5.39563710114971e-42 1.70333663214323e-74 7.14801550917123e-05 1.09931493163515e-65 2.5995568165156e-14 4.91935004613251e-47 XM_005225752.1 AFAP1L2 PREDICTED: Bos taurus actin filament associated protein 1-like 2 (AFAP1L2), transcript variant X1, mRNA. 0.0 6513 100.00 0.580385852090032 XM_005270239.1 AFAP1L2 PREDICTED: Homo sapiens actin filament associated protein 1-like 2 (AFAP1L2), transcript variant X8, mRNA. 0.0 3130 83.83 0.468006430868167 TCONS_00152229_4 sp|Q17R10|AF1L2_BOVIN AF1L2_BOVIN Actin filament-associated protein 1-like 2; 0.0 1544 100.00 0.998685939553219 1 coding 0 0 0 0 1.25058046238055 0.0241183053036512 -0.283786406246709 0.00108470018693996 CTGCTCGGCCACCCCTCCCCCCTTGAATCCCGCCCTCCAGCTGTTCCAAAAACACTTGAGTTCCTTGAACGCACCATGCCCTCTCCGCCTCTGCAGCTTTGCCAAGGGCTTGTCTTCTGTACGAGGTCCAGCTCTTCTAGGCAGTGGAGAGACGTGAGGACCTGGCCCCACGGACAGAAGCCCTGGAGCAGCTGCTGACAGAGCTGGATGACTTCCTCAGGATTCTTGACCAGGAGAACCTGAGCAGCACAGCCGTGGTGAAGAAGAGTGGCCTGGCCGAGCTTCTCCGCTTATACACCAAGAGCAGCAGTTCTGATGAGGAATACATTTATATGAACAAGGTGACCGTCCACAAGCAACAGAATGCCGAGTCCCAAGACAAAGCCCCCGAGCAGCAGAACCCGCTGACCAACGGTGAGCCCCCCCAGCCCTCCTCGGCCCCTCAGAAGAGTCTCCCAGACCTCCCACCCCCCAAGATGATTCCAGAACGTAAACAGCTCTCTGTCCCGAAGATCGAGTCTCCAGAGGGTTACTATGAAGAGGCTGAGCCGTATGACACATCCCTCAATGAGGACGGAGAGGCCGTGAGCAGCTCCTACGAGTCCTACGACGAGGAGGAGAGCAGCAAGGGCAAGTCGGCCCCCCACCAGTGGCCCTCGCCCGAGGCCAGCATCGAGCTGATGCGCGACGCCCGCATCTGCGCCTTCCTCTGGCGCAAGAAGTGGCTGGGCCAGTGGGCCAAGCAGCTGTGCGTCATCAAGGACACCAGGCTCCTGTGTTACAAATCCTCCAAGGACCACAGTCCTCAGCTGGACGTGAGCTTGCTGGGCAGCAGCGTGGTGCACAAGGAGAAGCAAGTGCGGAAGAAGGAGCACAAGCTGAAGATCACGCCGCTGAACGCCGACGTGATCGTGCTGGGCCTGCAGAGCAGGGACCAGGCGGAGCAGTGGCTCAGGGTCATTCAGGAGGTCAGCGGCCTGCCTTCCGAAGGAGCTTGTGAGGGAAGCCAGTTCACCCCAGATGCCCAGCGCCTGAGCTGTCCAAAGCCAGATATAACGGAGAAGTACCTGTCAGCCTCGGAGTGTGGAAGCCCCATAGATGGTCACCCTGAAGTCCCAGAGACCAAAGACGTCAAGAAGAAATGTTCTGCTGGTCTCAAACTGAGCAACCTGATGAACCTGGGCAGGAAGAAATCTACCTCGCTGGAGCCTCCGGACAGGTCCCTCGAGACATCCAGCTACCTGAACGTGCTGGTCAACAGCCAATGGAAGTCACGCTGGTGCTCCGTCAGGGACAGTCACCTGTACTTCTACCAGGACCGGAACCGGAGCAAGGCGGCCCAGCAGCCCCTCAGCCTGCTGGGCTGTGAGGTGGTGCCGGACCCGAGCCCGGACCACCTCTACTCCTTCCGCATCCTCCACAACGGCGAGGAGCTGGCCAAGCTCGAGGCCAAGTCTTCCGAGGAAATGGGCCACTGGCTAGGCCTCCTGCTCTCTGAGTCGGGCTCCAAGACAGACCCGGAAGAATTCACCTATGACTATGTGGATGCCGATAGAGTTTCCTGTATCGTGAGCGCTGCCAAAACCTCTCTGCTGCTGATGCAGAGAAAGTTCTCGGAGCCGAACACTTACATTGACGGCCTGCCCAGCCAGGATCGCCAGGAGCTGCTGTACGACGATGTGGAGGTGTCAGAGCTGACAACCGCGGGGGAAGCCCCCGAGGAAGCCACCCCTGCAACAGATGCTCCGGGTGAGCCTGACCCTGACCGTGTGTACCTGGACCTCACGCCCATCAAGTCCTTCCTACACGGTGACAGCGGCGCCCGGGCCCCTTCACCCACGCCGCCCCACCAGGACCCTCCGGCCGAGACTCTCCCTCTCCCTGAAGATTCGGACCCCGCCCCTGATGAGCCCCTCATAAAGTCTCCAGAGAACCCCGAGTTGCAGATGCAGCAGGAGAGTCAGGAACCTGAGGAGCCCTCCCTGGGAGGCACAGAGGTCAAGCTCCAGGCTGGACAGCAGAAGACCTCCCCTTCCCCAAGCTGCCCTGACACGGTGGCTGTCACCCCGGCCGGGTCCAGCCCACCTGTGAAGGACAGGCTGAAGGCAGCCAGTCCAGAGATCAAACTTGGCAAGAACCGGACAGAAGCCGAGGTGAAGCGGTACACGGAGGAAAAAGAGAGGCTTGAGAAGAAGAAGGAAGAGATCCGAGGGCACCTGGCTCAGCTCCGGAGGGAGAAACGGGAGCTGAAAGAGACCCTGTTAAAGTGTACAGACAAGGGGGCGGCGGCCAGCCTGGAGCAGAAGCTGAGGGAGGTGGACGAGGAGTGCAGGGTGGAGGAGCGCAGGCGTGTGGACCTGGAGCTCAGCATTGTGGAGGTGAAGGACAGCCTGAGGAAGGCGGAGGCCGGGCCCGTGACGCTGGGCACCACTGTGGACACCACCCACCTGGAGAGCGTGAGCCCCCGGCCCAAAGCGGCCACCCCGACTCCTGCCCCCGACTGTACCCCGGTCAACTCCGCAACTGCGCTCAAGAACAGGCCTCTGTCGGTCATGGTCACGGGCAAAGGCACCGTCCTCCAGAAAGCCAAGGAATGGGAGAAGAAAGGAGCAAGTTAGGAAACGAACTTCATCTAAAGACTCTCCTGTCAATATGGACCTTGGTGACAATCCTGCTTCGTAACAGTCTTCGTTAAAGCAGCAACTCTGTAAAAGGGTGAGTCTGTTTACAAGAAAAAGGAAGAACTGGGGTTCTGTGAATGGAATACTTCGGCTAAGAGGAGGCTCTGTCCCTGTGCAGGGCCAAAGGAAATAATACAAGACTCTTGGAGACCCAAGTCTATTGGTTGTAAATAGGACATTGCTGTAGTTAGGGGTATTCTGTGTTTCTTCCTTGAAATTTTCATCAGTTGTTTTATCAGACTTTTTAAATGAAAAGTTTCTGATGTGGAGGCCTTGGTGGAGGAGAAATCGAGGTAGCAGGGCCTTGTCTCACTGATCACAGGGCCTTGGTGAGAGTATATCTCAACTCCTGACCGTCATCTCCTATCTGATACTTAAGCAGTGTCAGGGGTTAAATCGTCCTTGTCTTCAACTGTGTAAAAACCATCAATGGTGTTTTTTTTTTAAAGAAATGGTAATTGGGAAAATATTTGGGACCAAACTGAGGCACTGTTCCTGGTAAATTAAGGACTTTTTTCAGGCTAAAGTGGGCCTGAACCAATTGCTTTTAAATAAAAATTTTAAATGATGCTGTATTATATAGGGGGAAAAAATGTTTAAAATCCTGTAATTTAGAACAGTGAAAAGTGTCTTTTGCGATTTAACTGACTTTTTACATTACTATAGAAACAAGATTACCCTGTGTTTACAGATTCAGTCCCATGGAAAGGCCATTTTTAAGAGAAGAGTTATTTAATACAGTGCTCTCTTAGTCCCTGTTTTTTGAAGTTGTGCTTGATGTCCAGGCCCTTTCCAAGAAGAAAAAAGGGGGCAAATTTTGTTTCAGGTGGTCTCTTTTCTTAAAATCGACAGTGCTCTTGTTTGTGTTGCCTGTTTCTCTCCCGATGGCATTGTTAACACAGGTTAAAACATTTCATCTATCATCTCTGCCTCACTTCTGGGGGTTCTGAATCAGCGTTCTTTAACACTGGTTCCTGGGAACTAAAGGGCCTTCGAGTCTGCCTTGTCTTTCTATTCCCAGGGCATTTATTTCCTTTGTCATTAACACTTGGCGTCCCAAGTGGTGAGTTAGTTAGATTTTTTTTTTAATAAAATGTTCATTGTATTTTGGATTTTCTTGTATTTCATGGGATGACGTGGCAAGGCCTGGTAGACTTCTACTTCAAGGGGAAAACATTGTGGATATTTATACACTGAACTTCAAACTCTGTGAGTCAAAACATAGAATTACAAGGTGGGATCCTAGCAGGAGACTTTAAGCCTCCTTACATCAAGTAGCAGAGGTAAGGCTGAAAGATTTTATAATTATAATTAAGACTTGGGAAACATCTTTAGAAACTGATCATATATAAAAATGACTGAAAATCAATACGTTTAAACACACTCCTAGATAATTCTTAGGGGAGTAAAAATCATATCAATACTTGAAATGTTGCCTTAGTAGTAATAATTAAAAATGACAAAACCAAATTTCTGACTCATTAAAAAGACAGCCTACAGCAATAGTAAATGGCAGAACTGAAAAAAGAGGCCTCAAGTACCGATACTGACAGTCCTTTTGAATTACAAGAAAATACTATGAATATAGCAGCTTGAAAGTTTGAGGACTACATATTTTCATTTGAGAGAGCATAGCTCTGATACCAAAATTCCAACACATAAAAGAAAAACATTCCAATATATTATAAAAGACAATCATTTTTGAACATAAATTGAAAAAAAACTTTAAAATATTGGCAAGTGGAATTCAGCAGTGTTTAAAGAACCAGACATTGCAACCAAATAGCATTTATCCAAGAAATCAAAGGTGGTTCAACAAGTGAAAAATACAGATAGACATTTCATCATATTAACGAGTCCAATGTGAAAAAACATCTCAAAGGGAGCAGCAAAGCAAACCACAAATCTCAGTACTCCTAATAAACACTCTAATCCAGGAATAGAAGCAAGCATTCCTTATCAAGTAATGCACAGAGAGTAGCAATGACAGAAACATCCTTTCAAGTCAAAAACCAGCTACGTTCCACTACTTGTTAAATCATCATTCTGGAGGTCCTAGACAAATGCAAAGTGACAAGAAAAAGTAGTATAAAATTTCAAAAGGAGAGACAAAACTGTCATTACTTGTAAATGCTATCTTTCTAGAAAAGCAAAAACTAGAGCAGCTGGCTGGAATAAGGATCATTTGGAGAAAATAAAAGATTTATGATCTATCGGCAATGTTTAAGTTTTTACAAGGAGAACATATTTGTATATTACGTAATTAAAGTAAAAGCCAGTTTCTTTAAAAAGAAAGAAAAAGGGTTAGCTGGGAAAAGATCACTTAAGGTTATCTTGTCAGGAATTCCCTCTTTCGCTACTAGAACCCAGAAAGGGTTAAACTCCAGTGGCACCTTGGCTAGAAAAGGTTAAATTTCTTTTCCCCCAAGGGCTGAAACCTAAAAATAGCAACAGTAAGGTCTTTAATATGTAGGCTAGGCCCAGGGCCCAGTTTTGTGCGGTTTTTAAGTCCAGTTCAAATGGGACATCCAAATATCAACCCTGAGCCAGACAAAGAACCTATATTATGAAATGATTAAACTGCTGTTAATGTAAAGACAATGGAATTCTCTAGCAGCTATCGGCACCTACCGGGTGGGCACGTGACTCTGCTCTGATATTGCTTTTGCCTTGGCAGAAGGCAACGACTGGAATGGAAATAGCCCTTGAATGGAAATGACTGTCATGCACAGTGCTTGGCACACTGGACTTGTTTTTAACATCTAATAAAACCACGGTGATGACCTTCCAAGTACTTTTCTTTGCACCACAAATCCTGAAGTTCTTAAGCAGTATTTAAATCAAAGTAGCCGTAGCCGTGAATGTTTGCCCATAAAACATCACATTAAAGGTATTTACATTAAAAATAAAAACTATGATAAAGTGTCTGGATTTAAATCAGAGCTCTGCAAAGGCTTCTACTGAAAACCAACTCCCAACTCGACCACCTGGGCAGAGAATTGATTTGTTAAGGACTGTGGGATAAGCAAATATCCAGTTCGCCGGAGAATATGCTATCTAAGCCTTTTTGCCATTTAGGGACAAATGCTCCTGTTAAATAAACACAACCAACATCACTTCTTGAAATATTCCTTTTAAAACCAGGTATGAAAAACAAAACTAAAACCAAGGCAGCATAAGATCTCCATCTAAAAAAACCAACCCCTTCAAATCTCTTTGTTCTACATGGACTGAGTTTAAGAATTCTGCTCCTTTTTGACCCCCAAAGGGAGAGTAAGACAGGCACTCAAGAAACACCCCACAATGAACCCTCCTAAGTAAACACTAAGAAGCCTCTCGAAGGGAGTGCTGGTCAGCTTAGGTGGCCCCTCGAATCCAGGGCTGTCTGCACACTCAGCCCCTCCCCCTCAGGTAAAGAGCTGGTCAGTCTCCTTCCTGTCTGAGGCCTTTCCAAGTCCCACACAGCGATCCCGTCCCAGAACAAGTCACAAATGCCGCTCAAGCCCCTCTTCAAACTAAAGAACGAATCCATCTGGAGC EMBV3_34831 ACGTTTTCTGGGAAGAGCTAGAGCAGGTCACAGTAGGCCTGATGCGTAACTCAGGTAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09034 GTGCCCACTGGTCCTTCAAACCCTCAGTCTACTCTGGTGTGTGGAACAAAGTGATGGACT Gene GeneID:534574|MFN2:XM_002694055:155_cdna Constitutive 0 NULL GeneID:534574 16 GENE MFN2 NULL mitofusin 2 EMBV3_37057 ACATTTCCAGCATTTGCAGTCCTTCATTTCCTGTCTCCAACAGAAAATTCACTCATTCGG Gene GeneID:515918|CA8:NM_001083690:5_cdna Constitutive 0 NULL GeneID:515918 14 GENE CA8 MGC157244 carbonic anhydrase VIII EMBV3_21500 AATGCTGATGGAAATCCAGACCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACC Gene BVT0102_348325 + 1 EMBV3_43640 GK000028.2:24715402-24745779 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187309 1 XLOC_113357 NonCoding TCONS_00187309 XLOC_113357 NonCoding NonCoding - 4:49210972-49216751 - TSS139677 5779 4 TCONS_00187309_8 100 0.871950164388303 1 0 3.47157061634258e-06 3.13797790028885e-06 7.20590731995359e-07 7.18476437972114e-07 7.11942870053001e-07 1.09807541372704e-06 3.34131088176685e-06 2.37960038439411e-06 2.44005468531293e-06 0.000976959059967646 0.000498025659062529 0.000328809245159884 6.22005791629898e-05 0.000416887163951829 4.62749266372512e-05 0.000584874678829654 0.000386466951838433 0.00148283383403347 6.71193019971437e-07 7.85318274242888e-06 1.89653209070361e-06 0.000429936733708034 0.000891396459671061 0.000724398138111298 3.32717276519099e-07 1.91052963361608e-06 3.01807783561383e-06 0.000974681029828462 0.000458936649758598 0.000967082216766332 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 863 91.95 0.104862432946877 0 noncoding 0 0 0 0 -0.84139902853958 0.108893530161815 -0.0404406565693177 0.457258585355567 CTTTACACAGTCTTCAGTGATAGTATCATTCTCTTCACTTTACAAATGAGGAAAAGATTTAAAGAGATTAGCCAGTTTCTCCAAGGACTTGAACAAATGAATTGCCAAAGGAGAGTTGGTGACTACAAAGTCTATACCTTTTTCCCTCTAGCACACTATAAACTATTATGCTTTTTTGTCCTTTAATCCTCTTTGCCTAGAAGTCTTCATGACCCAGAAATTACATTTCATTTTTTTTTTAACTCTTCTCTGTTAAAATCCTATCCACTTTTCAAAGATCAATTTATTATTATTTTTGTTTTGACCGTGTTGTGTGATTTGTGGGATCTTAGTTCCCTGAAACCGAACCCTCTGATGGGAAGCACAGGGAAAACACTAATGTAAATAATTGTGGGTTTTTTTGCATAAAGATTTCCCTCAGGTCCCCAGCTCATTATAACCTCTCCCCATTAATATTCCTACAGCATTTACTATCTTTTCTGTCTACTTTCATAGATTTGTCCATTGAAAAAAGTGCAAGCAACCTAAAAATTAAGGGTTACATTTTATTAGGCGGATATTTTTGAGACTTCAAGCTTGGGAGATAGTATCTCAAGTAACCTTGAGAGAACTGCTCTGGAGGAGGCAAGAGGAGGAGCCAGGTTATATAGAAGTTTTGCAACAAAGTCTAAACATTGAAAGATTGTTGTTAATTAGAGAAAACCAGATGACCCAAGTTAAGGAATTTAGCTAGCCCTTTTCTGCCTGTGGGAAGATGCGAGAGTCTGGGCTCTCTGAAATCATTCCTTGGATACGCATCTCAGCCATCTGGGGACTGTGTCTGTGTTTTTCAAATCCTGAGCTTCCTCAGGGCTCACCGTAGGGAGTAGCTGTAGTCTGATGGTTGCTAAATGTCAGGTATTTGCCTTCCTGTGAACCCTCAGGGCTCATGGCTCACACCAAAGGGCTGTAGTCACGGATGACTGTGACATCCTTGTTTCTTGATATGACAGGAAATATTCCATTTCTCAGATTCAACAGTTTTCTGTTTTGCTTTTTCTTTTTGGAGTGTCAATTATGTGCAAGGCACTCTTCTAGGCTTTTGGGAACCATCAGTAAACAAAGCAGAAATCAGCCCTCATGGAGCTTAGATCCTGGCAGCAGAGAACTTTATAAAATAAACACAACAGAGGAATTACAGCACATGTTAGAAGATGGTAAGTGCTGTGGACAAAAATAATGTGGAATCAGGGAGAATGAGAATGAAGGGCCTAGATGGTGTTTATTAGGGTCAGGACAACCCTCACTGAGAACATGACTTTTTTTTTTGATTGAAATTTAGTTAATTTACAATGTTGTTAATTTCTGCCGTACGGCAAGATTATTCACACACACATATATATGTACATTCTTTTTTAGAATATTCTTTTCCATTTCGGTTCATCCTAGGATATTGAATAAAGCTCCCTGTCCTTCCTCACTGGCTCAGTGGTAAAGAATCTGCCTGTAATGCAGGAGATGCAGGTTCAGTCCCTGGGTCAGGAAGATCCCCTAGGGGAAGGCCTGGCAACGCACTCCAGTATTCTTGCCTGGAAAATCCCCATGGAAAGAGGAGCCTGGCAGGTTAAAGTTCACTGGGTTGCAAAGAGTCGGACGCGACTGAAGCAATTTAGCATGCACACACTGCTATGCAGCAGTACCTTGTTGTATATCCATTCTGTATATTAAAGCTTGTTGTTGTTGAGTCACTTACTTGTGTCCAACTCTTTGTGACCCCCACAGACTATAGCACTCCAGGCTTCCCTGACCATAAACTGATGTCATCATGAAGGGATTTAGTGCTTTTTTAGATATGAAGAGATATAGGGACTGGGATCATGAACTCTGTTCCTGAAAATACCTAACTATCTAAAGACCTGCTTCACTAGATTCCCTGAAGCACAGCGTGCCTCACTCCACCCTGAACTCCCTTAGGGAGTGTTGAAACTCAACAGCTGCAGCAGCACAGGGTTCAATCTCTGTAGAAGTAAAGTGAAGTAAAAGTCGCTTAGTCAGTGTCTGACTCTGCGACCCCACGGAAGATCAGTTCAGTTCAGTCACTCAGTCTTGTCTGACTCTTTGTGACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCTATCACCAACTCCTGGAGTTTGCTCAAACTCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAATCTTTCCTAGCATCCAGGGTTCTTCACATCAGGTGGCCAAAGTGTTGGAGCTTCAGCTCCCTGGAATTCTCTATACAGTCCATGGAATTCTCTAGGCCAGAATACTGGAGTGGGTAGCTGTTCCCTTCTCCAGGGGATCTCCCCAACCCAGGGATGGAACTCAGGTATCCCACTTTGCAGGCAGATTCTTTACCAACTGAGCTACCGGGAAGCCCAGTCTCTGCAAAAGGAAATGGCAAATGCCCTTGTTGTTCAGTTATTGGCAATGCTCTTGGCAAGCACCAATTTGTAGTTGAAGTTGTCACACGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGCGACGGACATTAAAGCCCTTGGTGCGTCACAGCTCTTAGGTCTTGGACAAACCGTGCTACAGCTCTTAGGCAAATCAGTGTTACAGCTCCATTTGATTTAGAAGATAGCAGGAGAATCCAAGACTCAAAAAAAAGAGTGGAGGAGTACATGGGGCGGGTGGGAGGGGGGGAGAGAGAGAGAGAGAGAGCGCACGCGCACACGCACGCGGAGAGAGTCAGAGAAAGCGCTTTGGCTCCTCCTTTTATGTTTTTTTCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAGTGCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTCGGACCTTCCTTTGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACATTCCCCCCTCAAGAGGTGGGAGGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGACAGCAAGGGGTATTGGGCCTCCCCCTCTTACTAGTCTCAAGCCTCAGAGTCCTTATAGTGGTGTCCAAGGGTGTGTGATATTTTCCGTGGTCGGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTGGTTGACCTGGGCAGAGACAAAACAAGTTAGCCAATATTGACAGTACATGGAATAATCATAAGCATCATCAATATAGCATAACAAAGACTAGTAGGGGCATTAGCCAATTTTAAATTCACATCGCCAGGGTGGCTCAAGTCCCTCCTTGTTCAGGGATTAGAAGATATATCTCCTGTCTGTTTTGGAGTACAATCTCTGTCAAGCTGTGTTGGCTCTTTAGAGTTATCCTGAGAAATTTTATCCCCAGAAACCAGATTTTGGGGGTGTTCATTAGAATGACACTCATTGGTAGTCCTGAATAGGTATCTGAGAGCTCCCAGGGGCTCACAGGTGTATTGAGTGTCCTCTTCTGTTTTCTTCCACGGCTTGACTTGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCTGTGGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAGTTGAGCCTTTGGGGATCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCCTGGAGCATATAGTGGTGACTCTTCAGAATCTTTTGGGTCCTGGTTCATACCCCACAAGCATATATCCTGTTGGAATTGCCCAATGGCTATGGTATAAGACGAGGGGGGTCTGAACCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTCATAAGGACTAAGACCAACCTGTTCCTTAGGGGCAATGAGGGTGCGGAGGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATTGCTGATTTTAAGAATTGATTGGCTCTTTCTACTCTTCCTGAATATTGAGGCCTCCAGGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACCCCTTGGGTGACCTTAGAAGTAAGTGATGTCCCATTGTCACTTTGTAATGACCTGGGCAGACCAAATCTTGGAATGATTTCATGGAGCAGTTTTTTTACCACCTCCTCAGCCTTCTCAGTCCAGGTGGGAAAGCCTTCAATCCATCCTGTGAATTTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGTATCTGGGCGAAGTCCATCTGCCAGTCCTCTCCTGGGTAGGCCCCACATCGTTGGACGGGCTGGGCCAGCTGGGGTCTTCAAGCTCCTTAGGGGTTGTTTAATTGGCAAGTGGGACAAGAGGAGACCACCTGTCTTACAGTTGTTTGGAAGCCGGTTCCTCTGAAGGACCTTTCTAGTAATCCTTGGAGGGCCTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTCCAGGAAGAAAAAAGAGTCCCTCCTTTTGGAACCACCTCATATGATCTTCTTGAAAGCCCTCGCTCTTAGCTTTAAGAGTCTCGCCTTCAGTATATGAAGGAGTTTCTGGTAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGATGCTTGGTTCCCTCGTGCCACTTCAGTGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGTAGATGGACTGCCTCCAAGAGTTGAAGAATCTGATCACCATATTTGATTGGGGACCCTCAGGTGGTCAAGTGGCCCCTTTCTTTCCAAACAGCCGAATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCACACCCAGCTCTTCTTTTTCCATCCAGGACAAAGCTGCTTCCATCAGAGTACCAGATTTCCTCAGGATTGGTCAGAGGATCTTCTGACAATCCCTCTCGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAACAGTGACACGGGAGAGAGCCCTCGGGGGTAGGGAGGAAGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGATTTTCCATCAGCATTACTTGATATCTGAGGATTCTTTGATCAGATATCCATAAATGGCCTCTCCCATTTAGGAGTTGTTTACTTGGTGGCTGGTAAAAACAGTTAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCGAAGGCAGGGGGGCCAACCTCGGGTAGTTTGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATTCCAACCTTTGAGTTAACACTCCCAAGGATATTCCCTCTCTTTCATGGACATTAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGCAGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCCTCTGCCTTCTTTTGCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCATGGTAGGCTGCAGTC TCONS_00181574 TCONS_00181575 TCONS_00181576 TCONS_00181577 TCONS_00181578 TCONS_00181579 TCONS_00181580 . 5' 14202 TCONS_00181574 TCONS_00181575 TCONS_00181576 TCONS_00181577 TCONS_00181578 TCONS_00181579 TCONS_00181580 . 5' 14202 EMBV3_03008 TCTGGTTCATCAGTTGCCCTGCCAGTGGTCTTAAAAATTAGCAGGCACAAATCTGGGAGG Gene GeneID:616066|DAP:NM_001078058:35_cdna Constitutive 1 NULL GeneID:616066 20 GENE DAP DAP-1 death-associated protein EMBV3_10446 GGGATTTCCCCTCAAAAAGAGTCAGCGACATGAGGGAACTGTGTCAGTTTACCCCCTCAT Gene GeneID:511650|AGGF1:XM_002690418:107_cdna Constitutive 2 NULL GeneID:511650 10 GENE AGGF1 MGC157060 VG5Q angiogenic factor with G patch and FHA domains 1 EMBV3_28312 ATTCCCAGTTAAGCAGGCTTTGCAAAGACATTTTGAACAGCACCAGGAGACGTGCCAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15487 CTGAGGTTTTACCGCGCACAGAGTATGAAGCAGTTGTGGAATGCTGTGCCTTTGTCTGAT Gene GeneID:615627|TMEM50B:NM_001034786:58_cdna UTR3_Alt 2 NULL GeneID:615627 1 GENE TMEM50B MGC127178 transmembrane protein 50B EMBV3_38854 CCTGATGGTTCCCACTTTGACGTCCGGATCCCTCCCTTCTCCCTGGAAAGCAATAAAGAT Gene GeneID:539673|POLDIP2:NM_001098103:151_cdna Constitutive 0 NULL GeneID:539673 19 GENE POLDIP2 NULL polymerase (DNA-directed), delta interacting protein 2 EMBV3_07331 ACTTGCACTTGGGTAGTGATCCCTGAAACCCTCAAATCCTGGAAGGCTGAGGAGTAAACC Gene BVV0102_169562 + 0 NULL GK000021.2:27348449-27448603 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15317 CTGGGACAAGATAGCCAAGTGTGTCCCGTCCAAGAGCAAGGAAGACTGTATCGCTAGATA Gene GeneID:781036|LOC781036:XR_084573:41_cdna Constitutive 0 NULL GeneID:781036 13 PSEUDO LOC781036 NULL similar to DnaJ (Hsp40) homolog, subfamily C, member 1 EMBV3_16636 AAGGAAATGGAAGATCAGAAAGGGTGACAAGTGTGGTTAGTGTGTTTTCCATCATGCAAC Gene GeneID:541161|DKK2:NM_001082615:74_cdna Constitutive 0 NULL GeneID:541161 6 GENE DKK2 MGC155156 dickkopf homolog 2 (Xenopus laevis) EMBV3_06964 TCCTGAGGGACTCTTTTAGCGACTTTTTTCAACCCTTGATATGGGTGGGAGGGCAACGTG Gene GeneID:538579|RIMKLB:NM_001076113:49_cdna Constitutive 1 NULL GeneID:538579 5 GENE RIMKLB FAM80B MGC142528 ribosomal modification protein rimK-like family member B EMBV3_13640 GCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTCCTTATTAGGCCG Gene GeneID:784931|LOC784931:XM_002690996:295_cdna Constitutive 0 NULL GeneID:784931 10 GENE LOC784931 NULL similar to ribosomal protein S15a EMBV3_22390 AGAACAGACATCCTTAATGTCACCTCTGCTGTGAGCGTAAGAGCAGGAAGAAAAGGTGCC Gene BVV0102_097796 + 0 NULL GK000001.2:154967311-155004505 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005763 TCONS_00005762 TCONS_00005761 1 XLOC_001363 Coding TCONS_00005762 XLOC_001363 Coding Coding DPH3 1:155002219-155009885 j TSS2864 4389 1 TCONS_00005762_2 128 0.19958988380041 2 0.427658186562296 0.000896416543162828 0.000951088536228607 0.000864148580462343 0.000278059231962563 0.00103143436553674 0.00021672061681061 0.000499337591790297 0.000575889055902997 0.000620186201841533 6.71493723226459e-05 2.47645912833222e-05 0.000392384574028044 4.91284921333855e-05 9.79963200254706e-05 3.99558256486671e-05 0.000866221900825092 0.0002031301035915 0.000595870007298247 0.00074593026119217 0.000447955946859893 9.85556724610457e-05 0.000333501171170498 0.000340100739227305 0.0012494922251824 0.000503231908902155 0.000772793157955921 0.000771087954858951 0.00010449210301073 0.000173121019232175 3.37016077700101e-09 XM_005202131.1 DPH3 PREDICTED: Bos taurus DPH3, KTI11 homolog (S. cerevisiae) (DPH3), 0.0 5445 100.00 0.687628161312372 NM_001047434.2 DPH3 Homo sapiens diphthamide biosynthesis 3 (DPH3), transcript variant 2e-175 621 71.82 0.280246069719754 TCONS_00005762_2 sp|Q1LZC9|DPH3_BOVIN DPH3_BOVIN DPH3 homolog; 2e-31 110 69.51 0.4375 1 coding 0 0 0 0 0.0605993989199632 0.568974417766914 0.0226005892951546 0.794412107751996 GTGTCTCCGCCCCCTAGAGCCGCCATCTCCATGGTGACCGCTGCCCGGTCACCCCTTTGGCCTGACTCCCGGAGTTGCGTCATTGTCTCTGCGCCGGAAGCGGGCCTCCGTGGGCCGGAAGGGGGTTCCGCGCGCGGGTGCTCGGTGAAGACTCCCGTGTGGGCGGGCGCCAGCCAAGTTGGCCCGGGGCCCCGGCCTGGGTCGGACGGCGAAGCTGAGAGACCTGTGCCGGTTCCAGTGACGATGGCGGTATTTCACGATGAGGTGGAGATCGAGGACTTCCAATACGACGAAGACTCGGAGACCTACTTCTACCCCTGCCCGTGTGGGGATAACTTCTGCATCACCAAGGATCAGTTCACGTGTGGAGAGACAGTCCCAGCCCCTTCCACCAACAAAGAACTAGTTAAATGCTGAAGAAGATTTTTAGGTTCTAAAACCTGAACTTGGGGAATGAGGCAAGCTGGAAAAGTCTAATGCGGAGTCACTGGCTTCTTTACGGGGACAGTCCTTTTGTGGTTTGCTGTTCATGAGAGTCTGGATTCTTTCCATCAGGTGCCAAGTTCATCTCCAATTGAAGAAGCAAGTCCACCACATGACATGCCTGGATTTTGTGCTCAAAACCTTGAATTGGAAGTGTTTCCATCCAAACATAAAAGAAGATAATTTCAAATCAGTGCTTTTTTCCCTCAGTTTTATTTTTATATCTTTACACTATTACTTCATTATCTGACAACAGCATCATCTACCTCAAAGCATTAGGTTTCTTTAACTTAAAAAGATTTTTATTTTAATCACTTACGAAGATTTTTTAAATCAGCCCTTTCTATGCAATTTGACGTCAGCTCTTTGCTGTTGTAAACTGAAGGAAGTCAGTTGCCTCTAGTCTGTTGGGACTTCGCCTTCTACTCCCTCACCACACTGACCTTCGTCAGGGATCTGTGTTCTGTTAAACGTGCCACTTCATTATGCTTCATATACTGGGTCCTGGTGGTGGTGCAAAGAAAAAATATACTGAGCTCACAAAGTTAGTGAGTTAAGAAGAAAAGTCAAAAAACAAAACAGTCAAAGGATATGGACTTCCCTTATCAATATTCTGCGTTTTCCTTGAAAATCAGGACAAGATAAAAAACAGCCAAAGGAAGTGAAACTGGTAACAGAACGAGAAGAGAAAACTATGCCTACTTAGTTATTTAATTAAATGCTTGAGTGCTTTTTCGAGATCAGTGCAACTAATATTTCTGTATCTGGCCTGTTGTGTGTGTATTTGTTTTTCGATAAGGCTAATGAGATTTTACTCTAGACGGGTTAACGTCAAGTCTTCGTGGCTGGTGGCTGTGCTTTCAGCACTACTACCAAATCAGTCACTAGTCCTAAAAGGTAAAGCTTTGATAACAGCCCTTGTATTTACTAAGGATGAACTTGAAAATGAGATGCCTGTTCTAATTAAATATGCCCTGAGGGCAGATATGTGCTGCGCTTAGTCGCTCAGTCTTGTCTGGCTCTTTCTGACCCCGTGGACTGCAGCCCGCCAGACTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTACCATTCCCTTCTCCAGGGGATCTTCCCCACCTAGGGATCGAACCCAGGTCTCCCGTATTGCAGGCAGATTCTTTACTGACTGAGCCACCAGGAAAGCCCAAGGGCATATATGGTAAGCCTTTATAAGCTATAGCCACACATACATTCACTCTTGCAGAGAATTGTTACCCTGAAGAAAAAGAAAAATACAAAGATAGGCCATTGGTCTTCCTTTGCCACAGCCCTGAGAGTAGCAAGAAATAGAATCACTTGCATGGAAATTCCAAATTTCCCTTTAGGTACACACCTTTGTTGTGTGTACATAAAATTAACTGATGTCTGGTGGGTTGTTGTGGAATTGGTTCCTGCAATTAACGAGAAAAATAGCGTGCCAGAATGTGAGCATTTTATTACTAACTGATAAATGTTTTGTACACTCATTGGGGGTTTAAATTAAAACAGGCCAGTGGCCTTTTTTCTCCTGCCAATGGCATAGCTATATGAAGCCATTAGACTGAGAAGTAAATCACCAAAACTTGTATGCAAAACTGCTTGGTGCATTATATGAAGTGTACGGTGTGTTCTTGATGTGTTGAGAAATCACTGTCAGGGACACCGACACCCCAGAAGTCATCCACAGTTGCTTTGAAACCAGTGGTGGCTCAAGTGAACAGAGCAAGGTGTGTGCTAACTGGTGGGGATGAATTACAAAGAGAAAAAGACTGTCCCACACTCAGATCTGATGGTTTGGTAGATACCAATAACCAATGATGAATTTCAAATAAGAACAGACATCTTTAATGTCACCTCTGCTGTGAGCGTAAGAGCAGGAAGAAAAGGTGCCCAAGTCCAAACGTCCCAGGAGACAAGCCAGTGGCACTGGTGATGAGTGATATTCAGGAATGTGATCACAGGCATGATTTCATTCCCGAAAGCAACTGAGTCACTACATCGGTTAACCACAAAGAACACATCAGGATTTAATCCTATGTTAAGCAGAAGGTAAAACCAGGGTCTTGCAGATATGACTAGGGTTCTGTGGGGTCCCTTGCTTAGCTTCACAGACATTTCAGAGCCCCTCTGAGGCCTGATTTGTAATCCAGCTCTGTGACCTGCTAGCTTTGTAATCTTTGGCAAGACCAGTGGGTTCCTCATCTGTTAAAATCAGGAGACTAAATCGGGATTTCTAAATTCAGTACTGTAATTTCAGGCTTCGTAGTGTGCAGGAGCTGGAATGGTAATCGAAACCTTTCTAATCTAAACACTAAGATGACTTACAGAGAAAGACACTTCATTCTTCAGTAACTCCACATCAGAGGATTCTGCAGATAATTCAGTGTACACATTCAGAAACCCTTTTCTTGGAAAGCCCCCAACATTTTTGATAACTGTATATACTAATTTATTACCAGTTTAAACTATTAGCATGCTGAATAAAGTCAGATTATTCACATCGATTTGTTTTCATGTGATTTTTCCTCCCCTAAATACCAGCATTATGTACTTAAATATTGTAATGTGATTATATATGAGATGGAAAATCTTTAACCTGCTTTGGGACTTTGGAGGTAGGTTTCTGTTGTGGACAATACAGTTTTTAAATAGGTTGCCACTATTACTACAGGTTGGCCACATGGGTATTGGTTCTGGATTTTTAATAGTTATTTGGGAAAAAATAAGCTTTGGATTAAGTGGCAGTAAGGCAGATACAGTTGACATTCTTAGGTGAGTGATTCAGTTTCTTGCTGGGAAGGAAGGTTGCTGCTTAAGACATGGTAATTCTTATAGTGGTTTAAGAGCCCAGCTCTGGTCAGGACACGGGTTGAATCTCAGTTCCTCCACTGTGATCTTGGACAGGTTTCTTAGTCTTTGTGTATCTCTATGCCCTGGTCTGTGAAATACAGGCCATAATGGTGCCTTTTTCCCAGGGTTGCTCTGTGGGGGCAACAGACCCACGTTCAGCAGGGGTCTGTGGAATGCTTGCCACTATGAAGAAGCCAGGTAGGTTTCTGTCATCATGGAGCTTACCTGCAACAAGAGGAAATAAGAGAACAGGCTGTGTTTAGGGCCCAGGTGATGGGATACAACTGCCTTTCTCAAGGGCAGACTGAAGGCATCTCAGTCTGGTACCTTTTCTGAGACCTGAAGGATGAGAATGAAACGGTCTCGTAAAAATGACTACATTAGCTAATGATGACAACATTCAATACTGCCTGTTGTATATGCAAAAACAAAAAGGTTACCTATTCTGATATAAAAGGAATTCATTGTTTTGAGCACTGACAACATTATATGAAACATGCAAAATATTGAACACCCTCCGCATTTACTGATCTCTGGCGTGGATTTTGACAAGCCCTCACTGTGGTTCTAATGCAGCTGAAGCTTGAGAACCACTGGTTGAGCACTGGTGTTCAGACCCAGCAGCTCACTGAAATCACCCAAGGAGCTTCTGAAACTGCTGCCCATTGGCCTACGCTTCTGTTGCTGCACCAGTACCACGCTGTTTTGGTGCCTGTCACTTTGTGGTATAGTCTGAAGTCAGGGAGGTTGATTCTTCCAGCTCCATTCTTCTTTCTCAAGATTGTTCTGGCTATTCGGGGTCTTTAGTGTCTCCCTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGAACTGGACATAGAACAACAGACTGGTTCTAAATTGGGAAAGGAGTACCTCAAGTATATTGTCACCCTACTTATTTAACTTATATGCAGAGTATATCATGTGAAATGCTGGGCTGGAAGAAGCACAAGCTGAAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGG EMBV3_26955 CTCTGTGCCTTATCCCTTTCCTCTTCAGCTGTCTGGGTTTCCGTCTTAAGTTTGCTGCAG Gene BVV0102_261629 - 1 EMBV3_34157 GK000010.2:49829349-49860061 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017218 TCONS_00017217 1 XLOC_008990 NonCoding TCONS_00017217 XLOC_008990 NonCoding NonCoding - 10:49841728-49859806 - TSS11811 1925 4 TCONS_00017217_3 35 0.0711688311688312 4 0.89373236709631 0 0 4.98679157008285e-18 0 0 0 8.66978989072726e-17 8.54480212118904e-236 0 1.20609047708465e-92 1.11375654934772e-05 2.56286553521137e-05 0 0 0 0.000540899450423661 0 0.00132985178791705 5.20165601329016e-12 0 2.8619618310669e-19 0.000101066703179023 0.000215670984032636 3.68098360722555e-05 0 0 0 0.000141576853832516 0.000354561604636871 0.000324019531304012 XR_226896.1 LOC101902861 PREDICTED: Bos taurus uncharacterized LOC101902861 (LOC101902861), 0.0 3056 100.00 0.87948051948052 0 noncoding 0 0 0 0 0.110860594592124 0.645487484723404 -0.00177606846709943 0.969362393734095 CTTTCTCTGCTTCTCCAGCGCCACGTCGAGTTCTCAGCCCTGCCTCAGGTTCATATCAGTACAGTTGCAAGACTTTAGTAGACTATGAGGTTGGTTTTTTTTTTTTTTTAAGGCGTCGATGCAATGGAAGGAAGAACAGTTCCAAGAAACATAAATCGTGATTCCCCTGAGCTGGGCCGTTGGCATCCAGTCCTCGGTTACCGTCTGCAAACATATTAGCTTAACCTCTGACCAGCCATTCCCGGGAGGAGCGCTGGGAGGAAGAGTTCCGCAGTGTCCTGGCTGGCAAAGGATTCCTCCGCCTTGGGGCACGCTGTTGAGCGTCATTTCATTCCTGGGAATTAAGAAATGGCGAGGCCAAGACATCATTGCCAAGCTCACATGAAAATGTCCAAAAATATAGTGGACTGAAATGGAATCTTCAATAATGACATAAATGAGGATTGAGAGCCTGTGGTATTCATGTGGGCATTCCGGAGAGCTGCAGCAAACTTAAGACGGAAACCCAGACAGCTGAAGAGGAAAGGGATAAGGCACAGAGTTACTGGATAGAGATCAGCCCAGAGACCTCCACCAGTCAGGCCTTACAAAGGATGACTACTCGCCTGGAGCTGCAATTATTCATCCTTCATAAACAGAGATCGCTTCTCAGAATTGTTAACATTGCTTCTGTTAGTCTTTAAACAAAGCGGTCTGTTTATAAGTTAGGAACATTAAAAAAAAAAGTCATCCACCTTGTATTGTTTAAAAAAAAAAAAAAAAAAGAAGTCTGCACACACTCGATACCAAACTGAAAAGGAATGGAGAGGAGATGGAGGCATAGCCTGAGACCCACATGGGTTTTTAACTGGCTAAGTTCAATTTTCTCTTTCAAGGCTGTAGTAGCCATTTTAAATATTTAAACATTAACATAAATACCACACAAACATCAAAGCGTTCTGGGGAGGAGGTCATGCCATTATTTACCCAAATGCTCAAGTCTCTGAGGGAGGGCACCTTGGGTTTCAGCTTGGGCTCAGGTGCTGGGCTCACTTTCTCTTTTTTTATTTTCTAGACGCCAGAGTCCAAGCATTAAAAGGTAAGGAGAGTCCAGCAAGATAAAAGTAACATTTAAAGAGTTAACCATTCTTTTTTAAGTGACCTTCTTGGGAGGATACCAACTTTTCCGCCCCCCAGATTTAGAATCCACTTCCAAATGATACAACTGGAATTTAATTCCCCAAAAGAACAACTTTTGCAAAGGAACCTTTATCCCATTTAGTATAGCTTTGAGCTCTAGAGGAAGGCGAGCCATCTGACTTACCCTGCATGAGGATCTGTAGTACTGATTACCACCAGTTCTGATATGTCCAACTCCAGTAGACTTAAGATCTGCATCGTCCATATCATTGGCTTGGCCACATCGTTACATATGTGGGGGCAGGCGTATCTGGTACCGCAGAAACAAAGGTGAACAGATTGCCAGTAAGACTGATCACTATAGCCTCAAGTTTAGGCTGAAAAAATAGCCTCCCTTGATTTCTCTGCCCTCAGATTGCCCTAGTTTCCATTCCGCCTCCCAATCTAGCTGACATATTTCAGCCACAGTTTCCATTATAGAAGTTTAATCATGTGGCCCACCTCTACTGCCAGCCTCATTAAAAAGCTTTTGATTATTCCCCATCTCAAGACAAAGGCTTCTGTCTCTAAGAAGGCACGTGGGGCTTTTTATTGACAACTGCTCCCCACCACATTTTCTTAGGTATCTTTCGGTTCCTTCCCCATAAATACCCATGGCCAGGTCTTAGGCACCCTGGAAGGCCTGCCATTCCAACAAGCGGTGCATGTTTCTACCTCTGCAGCATGGATTTTACTGTCCCTCAGCCTGAAATTTCCCTTCCCATCTGACAAACTCCTTTCAAACTTCAGCTCAAACGATACCTCTC TCONS_00013888 r 5' 0 TCONS_00013888 r 5' 0 EMBV3_25593 AATACTATTTGGGGACTGTTGTTATTGTGCAGTCGCTAAGTCGTGTCCCACTCTATGCGA Gene BVV0102_229968 + 0 NULL GK000030.2:61050946-61053063 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244565 1 XLOC_150494 Coding TCONS_00244565 XLOC_150494 Coding Coding ATG4A X:60973567-61052471 j TSS183784 2882 1 TCONS_00244565_3 398 0.150936849410132 13 0.963638898394231 0.000398058328681056 0.000608820525691742 0.000582771838079025 0.00010915007688739 0.000321858778464787 0.000104668784313835 0.000124644075705189 0.00040532869506751 0.00066697359925866 9.61036395069653e-05 1.30660211902603e-06 1.35182932371521e-213 1.63604412743668e-05 9.9286797254635e-05 8.26957103959569e-06 0.00336141204873017 1.86049254987487e-05 0.00190808451625274 0.000435675376558349 0.000304426067910163 0.000227468197167981 0.000177663608983612 0.000643010618733732 0.00139923561131658 0.000724100822120465 0.000664128219370837 0.000422414079609505 8.25031902292095e-05 1.23066006124523e-05 4.50677188810354e-05 NM_001001171.1 ATG4A Bos taurus ATG4 autophagy related 4 homolog A (S. cerevisiae) (ATG4A), mRNA. 0.0 2154 99.92 0.41498959056211 NM_052936.3 ATG4A Homo sapiens autophagy related 4A, cysteine peptidase (ATG4A), 0.0 2720 86.06 0.80499653018737 TCONS_00244565_3 sp|Q6PZ05|ATG4A_BOVIN ATG4A_BOVIN Cysteine protease ATG4A; 0.0 827 99.75 0.99748743718593 1 coding 0 0 0 0 -0.0335581411217116 0.780724841991894 0.0168600417788707 0.765716632390934 CTCTGGGAGTTGCAGTCTGAGCGCAGTTCCGGGCGGGGAGGCGCCTTCGCCACTCTCCCCGACTCTGACCCTAGCGGCGCGGAACTACGAGTCCCAGGGTCCCTTGCAGCCTCCGTAGTCAAGTGGCCGGTGGAATTGGCCCAGGATGACAGCTGGAGAATGGAGTCAGTTTTATCCAAGTATGAAAACCAGATTACTATTTTTGCTGACTACCTAGAAGAGTTTCCAGATACAGATGAGCTGGTATGGATCTTGGGAAAACAGCATCTTCTTAAAACAGAAAAATCTAAGCTGTTGTCTGATATAAGTGCTCGTCTATGGTTTACATACAGGAGGAAATTTTCACCAATTGGGGGAACAGGCCCTTCATCAGATGCTGGCTGGGGATGTATGCTACGCTGTGGACAGATGATGCTGGCTCAAGCCCTTATCTGCAGACACTTGGGAAGGGACTGGAACTGGGAGAAACAGAAAGAACAACCCAAAGAATACCAACGAATCCTACAGTGCTTCTTAGATAGAAAAGACTGTTGCTACTCTATCCATCAAATGGCACAGATGGGCGTAGGAGAAGGGAAATCAATTGGCGAATGGTTTGGACCAAATACAGTTGCACAGGTGTTGAAAAAACTTGCTTTATTTGACGAATGGAATTCCTTGGCTGTTTATGTTTCAATGGATAACACCGTGGTCATCGAAGATATCAAAAAAATGTGCCGTACCCTGTCCTTGAGTGCTGACACACCTGCCGAGAGGCCCCTGGAGTCTCTGACTGCTTCCAACCAAAGTAAGGGCCCCTCGGCCTGCTGCACGGCCTGGAAACCCTTGCTGCTCATTGTGCCCCTCCGCCTAGGCATAAACCAAATCAACCCCGTCTATGTCGACGCCTTCAAAGAGTGTTTTAAGATGCCACAGTCTTTAGGGGCATTAGGAGGAAAACCAAATAACGCCTATTATTTCATAGGATTCTTAGGTGATGAGCTCATTTTCCTGGACCCTCACACAACCCAGACCTTTGTTGACACTGAAGAGAATGGAACGGTTGACGACCAGACTTTCCATTGTCTGCAACCCCCGCAGCGGATGAACATCCTGAACTTGGATCCTTCCGTAGCATTGGGGTTTTTCTGCAAAGAAGAAAAAGACTTTGATAGCTGGTGTAGCCTTGTTCAGAAGGAAATTTTAAAGGAAAATTTAAGGATGTTTGAATTAGTTCAGAAACATCCATCACATTGGCCTCCCTTTGTTCCTCCAGCCAAGCCAGAAGTAACAACCACAGGGGCAGAGTTCATTGACTCTACTGAACAACTAGAGGAATTTGACCTGGAGGAAGATTTCGAGATTCTGAGCATATAGGATAGTGGGAGCTCATCTTGGAGATCTGTCTTCCATCTGGCACCAGAAGAACACGAACTCATCACGTAAAACTTTTTTAGTCAGCAAGTGCCTAATATGCCAACAGCATACAAACTTGATAGGAATCATGACTGAGCCAATCACCATTTCTCAACAAAAAAAAAAAGAGAGAGAGAATGAACAATATACCCTTTCCCCAGAAGGAACTAAAACAATCATGGAGTCTAGGAGCAGAAAGATTAGGAGCCATCTCTTGCTTCCCAGCTTCTTACATGGCCACAGCAAATCTTCAGCTGCTGGAATGAGGAGGTGGATGTATGGAGGACAGCCAGCAACTCCCACCTTGCTTTCAGCACCAGCAGATGAGAGATGGTTACCTTGTGCTTCTTTACCCTTTCAGGTTTGACTTCTTTGGGCTAAATACTAAGAAGCAATCTGTTCCCTTGCTCTAATAATAAAGTGTTAATCATTGTATCAGAACAATTGTAACAAGAACAAAATGTTCTCGTTAAAGTATTTGAATATGTATTTAAATAATCATAATTGATCTCAAAAAGTATGTCAAAGACATTACATCAAATGCATATTTATTGATCTTCCTATTTGAGAGAAGCTTACTATTGAATGGGTCATTGTCCCCATCTTAACTGATACTTTTGTCAGATGTCACCCTGTCCTTAAATCATTTATCACTTAATTCAGGGGTCTGCAAACTTTTTCTGTCAAGGGCCAGAGAAGAAATATTTTAGGCTCTGAAGGCCATGTAGCATCTGTCACAGCTACTCATCTCTGCTGGTGAAGCACCTAAACAGCCCTAGACAGTGTGCATGCACAAGAGCCTGGCTGTAATGCAATAGAACTTTATTTACAAAAAAAAAGGGGAAGGGCTGGATTTAGCCCCAGGCTGTAGTTTGCTAATCACTGACTTAAATTATTGATTTTTGTTTGGGAAATTAAAAATTGTGGTTGAATTTGACTCCCTTTTGCTTTATAATCATAATTGGAAAGATAATTATTCATGTGGTGACATTTAATCTGTGTATCAAATACTATTTGGGGACTGTTGTTATTGTGCAGTCGCTAAGTCGTGTCCCACTCTATGCGACCTCATGGACTGTAGCCTGCCAGAGGACTGAAATCCTCTGTTTGTGGGATTTCCCAGGCAAGAATACTGGAGTAGGTTGTCATTTCCTCCTCCTCCAGGGGATCTTTGCAATGCAGAGATCAAACCCACGTCTCCTGCACTGGCAGGACGATTCTTTACCACTGAGCCACCTGGGAAGCCCTTAATTTCAAGACTAGCAACATACTAAGTTTTAAAGCACATATTCATCAAATTGGTTTTGCTAACCATTCTCCTGTGTGGATGTACCTCACATCCCAGTGATATTTTCCCATTTTCCACTTGTTGTCTTTTTCAACCTGTATGCATTTCACCTCCATGCTCAACAAAGTGCCCAGCAGGCCCCAGGAAGGCCAGCAACTGCAGTATGAAAACTATCAAATAAAGGAAATAAACCAAACTA EMBV3_12236 AAGTCACTCTTAGTGCTGATTGCTTCCCCAAGAGCCCCAGTCACACCGTCAGAGCAGTTT Gene BVV0102_012411 + 0 NULL GK000013.2:23743811-23900872 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28270 GAATACCACCTGCTATAAAATCTGCAAACTCGGAACTTGGGGGGATCTGGTCAGTTGGCC Gene GeneID:100299671|LOC100299671:XM_002687830:144_cdna Constitutive 0 NULL GeneID:100299671 5 GENE LOC100299671 NULL similar to COP9 signalosome subunit 8 EMBV3_20470 AAGCAGTTTTACTTGTACATGGATGTGCGATGCTACATTAAGTCCTGAGTAATTTAAGGG Gene BVV0102_355868 + 0 NULL GK000013.2:10208940-10238639 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044367 TCONS_00044370 TCONS_00044366 TCONS_00044369 TCONS_00044372 TCONS_00044371 TCONS_00044368 1 XLOC_026194 Coding TCONS_00044368 XLOC_026194 Coding Coding KIF16B 13:10237782-10549358 j TSS32639 5062 1 TCONS_00044368_6 1295 26 0.983836957393886 0.000364816325324133 5.62497159042219e-08 6.09864902610995e-05 1.38945168787497e-07 2.21411681889588e-07 5.09789612807338e-18 0.000103363556691404 0.000126277955278688 3.54125799272026e-34 5.95767774272909e-13 1.76684957490362e-131 1.13831372872073e-12 6.37403394946792e-18 9.09638775332745e-220 3.55908962610397e-06 0.000311379728029014 6.23910052261723e-19 1.44801726333594e-16 2.73137960191194e-05 1.59134279162104e-08 0.00019706637846935 9.05166462294334e-05 3.53504023171498e-05 1.56648143210573e-19 0.000212352325700639 1.01998486933705e-07 0.000199904499928137 7.20938674821825e-72 5.22900600266638e-55 2.30039809928464e-05 XM_005194260.1 KIF16B PREDICTED: Bos taurus kinesin family member 16B (KIF16B), 0.0 6197 99.03 0.686092453575662 XM_005260751.1 KIF16B PREDICTED: Homo sapiens kinesin family member 16B (KIF16B), 0.0 3380 83.55 0.629197945476096 TCONS_00044368_6 sp|Q96L93|KI16B_HUMAN KI16B_HUMAN Kinesin-like protein KIF16B; 0.0 2196 85.74 0.999227799227799 2 coding 0 0 0 0 -0.0464737192883207 0.760065365114019 0.0330991479372739 0.637038632634917 GGATCACGCGGGCCGGAGCCGCTCTGAGCATGCTCAGAGGCGGGGCCGGAGGGCAGCCGCTGCCGTGGAGTCCGGCCCGAGCGCAGGGGCGGGGGCCGGGGAAGGGGGCGGGAGCCGCGGGCAGCGTCTCGGGAGTCGCGGGCTGCGGCGGGCGCGGGATCGCGCGGGCCGGGCCGGGATGAGCGATGGCCTCGGTCAAGGTGGCCGTGAGGGTCCGGCCCATGAATCGCAGGGAAAAGGACTTGGAAGCCAAATTCATTATTCAAATGGAGAAAAGCAAAACGACCATCACAAACTTAAAGATACCAGAAGGAGGGACTGGGGACTCAGGAAGAGAACGGACCAAGACCTTCACCTACGACTTTTCTTTTTATTCTGCTGATACAGAAAGTCCAGATTATGTTTCTCAAGAAATGGTTTTCAAAACCCTTGGCACAGATGTCGTGAAGTCTGCGTTCGAAGGTTATAATGCTTGTGTCTTTGCGTACGGGCAGACCGGATCAGGAAAGTCATACACTATGATGGGAGACTCTGGCGATTCCGGCTTAATACCCCGGATCTGCGAAGGGCTCTTCAGTCAGATAAACGAAACCACCAGATGGGATGAGGCGTCTTTTCGAACTGAAGTCAGCTACTTAGAAATTTATAATGAACGTGTGAGAGATCTTCTTAGGCGGAAGTCATCCAAAACCTTCAATCTAAGAGTCCGTGAGCATCCAAAAGAGGGGCCTTATGTGGAAGATTTATCCAAACACTTAGTCCAGAATTATGGTGATGTCGAAGAGCTTATGGACGCAGGAAACATCAACCGGACCACCGCCGCCACCGGGATGAACGACGTCAGCAGCCGGTCTCACGCCATCTTCACCATCAAGTTCACGCAGGCCAAATTTGATTCTGAAATGCCGTCTGAAACCGTGAGTAAGATCCACTTGGTCGACCTTGCGGGAAGTGAGCGGGCGGACGCCACTGGTGCCACCGGGGTCCGGCTGAAGGAAGGGGGCAACATCAACAAGTCCCTTGTGACGCTGGGAAACGTCATTTCTGCCTTAGCTGATTTATCTCAGGATGCATCAAACCCTCTAGTAAAGAAGAAGCAAGTTTTTGTGCCTTACAGGGATTCTGTTTTGACTTGGTTGTTGAAAGACAGCCTCGGCGGAAACTCTAAAACTATCATGATAGCCACCATTTCACCTGCTGATGTCAATTACGGAGAAACCCTAAGTACTCTTCGCTATGCAAATAGAGCCAAAAACATCATCAACAAGCCTACCATTAATGAGGATGCCAACGTCAAACTCATTCGTGAACTGCGAGCCGAAATAGCCAGGCTGAAGACGCTGCTTGCCCAGGGGAATCAGATTGCCCTCCTGGACTCCCCCACAGCCTTAAGTATGGAGGAGAAACTTCAGCAGAATGAAGCCAGAGTTCAAGAATTGACCAAGGAATGGACAAATAAGTGGAACGAAACCCAAAATATTTTGAAAGAACAGACTCTGGCCCTAAGGAAGGAAGGGATTGGGGTTGTTTTGGACTCCGAGCTGCCCCATCTGATCGGCATCTATGATGACCTTCTGAGCACTGGCATGATCCTGTATCACTTGAAGGAAGGTCAGACACATGTTGGCAGAGAAGATGCTTCGACAGAACAAGATATCGTTCTTCACGGCCTCGACTTGGAGAGTGAGCACTGCATCTTTGAGAATGTTGGGGGGACGGTGACTCTGATCCCCCTGAGTGGGTCCCAGTGCTCTGTGAACGGCGTTCAGATCACGGAGGCCACACACCTCAATCAAGGTGCCATGATCCTCTTGGGAAGAACCAACATGTTTCGTTTTAACCACCCAAAGGAGGCCGCCAAGCTCAGGGAGAAGAGGAAGAGCGGCCTTCTGTCCTCTCTCAGCTTGTCCATGAGTGACCTGTCCAAGTCCCGCGAGAACCTCTCCGCCGTCATGCTGTACAACCCAGGACTTGAATTTGAGCGGCAGCAGCGTGAAGAGCTTGAGAAATTAGAAAGTAAAAGAAAACTCATAGAAGAGATGGAGGAGAAGCAGAAGTCCGACAAGGCGGCGCTGGAGCGGATGCAGCAGGAGGTGGAGACGCAGCGCCAGGAGACGGAGATGGCACAGCGGCAGATCCGCAAGCAGGAGGAGAGCCTCAAACGGCGCAGCTCGCACCTGGAGAGCACCCTCAAGGACCTGCTGGCCGAGAAGGAGCGCTTCGAGGAGGCGAGGCAGCGGGAGCAGCAGGAGACGGAGCTTCAGAAGAAAAAGCAGGAGGAGGAACGCTTCCTGCGTGTCCAGGAGGAGCTCCAGCGCCTGCAGGAACTCAACAGCCACGAGAAGGCCGAGAAGGTTCAGATATTTCAGGAGCTGGAGCGACTCAAGAGGGAAAAGGAGGAGCAGTACGCCAAGCTGGAGCAGGAGAAGCAGCGGCTGGAGGAGCAGGAGCGGGAGCAGGTCCTGCGGGTGGCACAGCTGGAGGCGCAGCTCCGCGCGAAGCAGCAGCTGCTGCAGCCGCCACAGCGCGGAGAGGCGCAGCGCTTAGCCGAGGAGCGCCGGCACCTGGAGGGCATCCGCACCGCCCTCCTGCAAGCCAGGGAGGCCGGGGCCGAGGCGGGTGGCGACAGCCCGGAGCTCGAGCAGGCGCAGCTGCGGTTCTTAGAGTTCAAGCGAAGGCAGCTGGCCACGCTGGCCAACATGGAGAAGGACCTGTTGCAGCAGAAGGACCTCCTGAAACGGGAGGTGGAGGAGGACCGGGAATTCCTCCGCGAGCGCTTACCATCTGGCAGCCAGGAAGAATTGAGGGGGTCGGAAAAGGAGGAGGAGGGCGGCGCGGACGTCCTCTGGGCGGCCGGAGCCGTGGAGGGGATGCAGCCGGCGGAGGGCAGGCTGCAGTGTAAGAAGCGTCAGCTCCAGGACCTCCTGCAGCAGCATTTGCCCAGGCTGTCGGAGGAGAAGCAGAGAGTCCGTGAGATCCTTGATCGAGGTCCTCTCGACCTGGACAACACTCTCTACCTAGTGGAGAATGAGATGGAAGAAAAGGAAGAGCAGCTCGCGCAGTACCAGGCCAGCGCCAGCCAGCTGCAGAAGCTGCAGGCCACCTTCGAGTTCACGGCCAACGTGGCCCGGCAAGAGGAGAAGGTGAGGCGGAAGGAGAAGGAGATCCTGGAGTCCCGAGAGCAGCAGCAGCGCGAGGCGCTGGAGCGTGCGGTGGCCCGGCTGGAGAGGAGGCACTCCGCGCTGCAGAGGCGCTGCGCGCGGGCCGCTGGCGGCGAGCAGGCCGGGCAGGAAGCCCTGGAGAAGGACCGGGAGAGGTTAGAACATGAAATCCAGCAGTTGAAGCTGAAGATCTGTGAGGTCGATGGTGTTCAAAAAGGGCATCGTGGGACCTTAGAGGGAAAGCCTGCTGCTTCCAGCTTCCCATCCAGTGCAGAAAAATCTCACCCAGTCCCTCTGATGGATGAGAGGATCAGTGCGTACATTGAAGAGGAGGTCCAGAGGCGTCTTCAGGGTCTGCACCGCGTGGTCGGTGATGGCTGCCGTGAACCTGCGGACACCATGAAGGATAATGAGAAACTTCACAATGGCACCATTCAACGGAAGCTAAAATACGAGCGGATGGTTTCCCGCTCTTTGGGAGCAAATCCAGATGACCTGAAGGACCCCATCAAAATCAGTATCCCCCGCTACGTTCTCTGCGGCCAAGGGAAGGACGAGCACTTCGAGTTTGAGGTCAAGATCACTGTCCTGGATGAGACGTGGACCGTGTTCAGGCGTTACAGTCGTTTCCGGGAAATGCATAAAACACTGAAGCTGAAGCATGCAGAGCTTGCGACCCTTGAATTCCCTCCAAAGAAACTATTTGGAAACAAGGATGAACGTGTGATTGCTGAGAGGCGAAGTCAATTAGAGCGGTACCTCAGGGACTTTTTCAGCGTGATGCTCCAGTCGGCCACGTCCCCGCTGCACATCGACAAGGTGGGGCTGACGCTGTCCAAACACACCGTGTGCGAGTTCTCGCCGTTCTTCAAGAAGGGCGTCTTTGACTACAGCAGCCACGGGACGGGGTAGGACTGGAGATGGAACCTCGCCACACAGTGCCTTCTCATCCGAGCAGCCCCCGACCAGGGGCCTGGACCCCTCACCGCCTCCTCCGAGTGCCTGAGCAGAGCCGGGCCGCGCTGGCCACGGTGACACTGAGGGGCAGCCGCCCCTGCCCCTCAGGGTGAATGCGGCCTTCTCTTTGTGTGCAGAGCCTGTCCTGGAGGCTCCGTCACCCTGGGCCCCTGGAGCCGAGCCAGCCCGGGGGCTTCCCTGGTGGGTGGCTGGGCAGACCTCCCCAGTGACTTCCATCTGGTTTCCCCTTTCACCAGAATACTCTTATTTTTTTAATATCCCTTCCATGTGGCTGGCTGTATCCCAAGAAAAGCATTTTAAATTACTTCATTGTATCTTCCTTTTTCCCCATTTGAGGCTGAACTTTTTGTATAATCCCCTAAGCACCGATGTTTACACAGAATTTCACATTCTGCAAAAGGGATTTTCAGTCCAATCATAACTGGAGTCTTCCATGCTTGACACATTGGATGTAGGTTACATCAGCTTCTATAAATCCATTGAAATAGGATATTTGTTTAATCTTGAATATTCAAGAAGTTTTTACCAAATGGCTGTCCTGCACGTTCAAGCTTTCTCTGCTAAGCACAAAATGAGCTCCTCATTGAAGGCATATTTTTAAACATTTCGTTCACATTTTTGTTACTGAATCTACTGGATCTTAAGCTGCAAGACTAGAATTTACTGTAGTTTATTAACGATCCCTTAAATTACTCAGGACTTAATGTAGCATCGCACATCCATGTACAAGTAAAACTGCTTTGTTTTACTAAAGAGAAAAATATGAGAAGAAAAAAAGATATATATGGTATATATTGAAATGTATATAATTCTACCTATAGATTTATATGTGTACACAGTCCTGTATGATAGTTATATCAAAATATATAATTCACATGAAATTTATTAAAGATATTTGCTTTTTTCAAGATTTAAATGGAGCT EMBV3_00229 GCTGTCTTCAGGATTGAGGACGAGCAGCTGAAGGTGTGGGATGTGATTGGCCGAAGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15406 ACACCAAGTGTTGTGTGGATGGTGGGATTGCAGGTGTCATACAAGTGAGGGGTGTCTACT Gene GeneID:100140945|CASP9:XM_002694144:529_cdna UTR3_Alt 2 NULL GeneID:100140945 16 GENE CASP9 NULL caspase 9, apoptosis-related cysteine peptidase EMBV3_30449 ATGGCCAGGATCTGTTACAGCCCTGACTTTCTCACCTATGTGGATTTCTTGGCTTATGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26007 AAATGTCCATCCTCCTTCTAGCTGACAGCCCATTGAAGATCTATTTCCCAACTCATCCCC Gene GeneID:511460|CLDN18:NM_001075516:21_cdna Constitutive 0 NULL GeneID:511460 1 GENE CLDN18 MGC140810 claudin 18 EMBV3_01866 CGGGGCATCCTCTGGTGCTCACTTGCCCAGGTCTCAGTCCGCAGTGAGGAACAAGAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26780 CCCACTTTTGGTGGGTTGGTTGTATTGTCGGTTTTCTCATGTGTGTGCTCAGGGGGATTA Gene GeneID:522631|LOC522631:XR_084648:413_cdna Constitutive 0 NULL GeneID:522631 24 PSEUDO LOC522631 NULL similar to mCG21813 EMBV3_23467 GGTGAACGGTGGACCCCAGGGAAACCCCGTCTGGCTACATCGCTGTGGACGAGGTTCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28091 TGGGCTACATCAGGGTGCGATTTTATGAAGGCTCTGAGTTGGTGGCTGATTCTGGGGTCA Gene GeneID:541281|THBS4:NM_001034728:249_cdna Constitutive 0 NULL GeneID:541281 10 GENE THBS4 MGC129051 TSP-4 thrombospondin 4 EMBV3_35431 AAAGACGCAGGAAGCAGCAACACCTTTAACACCACGACACCCGCTGACATCTTGATTTCC Gene BVT0102_179853 + 0 NULL GK000010.2:6182027-6431947 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015758 TCONS_00015754 TCONS_00015755 TCONS_00015759 TCONS_00015757 TCONS_00015753 TCONS_00015756 1 XLOC_008554 NonCoding TCONS_00015754 XLOC_008554 NonCoding NonCoding - 10:6410212-6414354 - TSS11065 1301 1 TCONS_00015754_3 119 0.794773251345119 3 0.68654914271915 3.80514846936697e-05 7.72361396262234e-06 5.18429559132594e-08 0.000111351869001058 9.70102617758643e-06 2.17468713851967e-75 1.62256508856636e-89 0.000265571895915479 4.06703527303526e-05 0 0 0 2.36921487677729e-12 9.31219467421628e-35 3.8106716373649e-05 0 9.8034308708404e-05 0 0.000220839578094414 3.0632085917373e-207 1.57274665109206e-05 0 0 0 0 0.00274301684886725 1.55584231954166e-13 0 0 0 XM_005220735.1 TNS4 PREDICTED: Bos taurus tensin 4 (TNS4), transcript variant X1, mRNA. 8e-29 132 71.03 0.202920830130669 NR_046216.1 MGC27345 Homo sapiens uncharacterized protein MGC27345 (MGC27345), 5e-12 77.0 68.24 0.217524980784012 0 noncoding 0 0 0 0 CTTTTTAGACCTCTCATAAGTATTCACAATGCAAAATAAGTTATAGTTCTGAATCCTGCCGGAAGTCGGAAATCAAGATGTCAGCGGGTGTCGTGGTGTTAAAGGTGTTGCTGCTTCCTGCGTCTTTAAGAGAGCGTCTGTTCCATTCCTCTGTCCTAGTTTCTAATGGTCCTGGTGACCGGAAGGATTCCTGACTCTCCAGAGGTGCATCCAGTTTTCCCACTGTAGGAATTTAAACAAGATCTGATTATGCTCTTATGACCCTACGTGATTGTGTTCTGAGTTTCCGTGGATTCTTTTTGAAACCTTTTATACTTATTTTATTTCTGGCTGCTCTGGGTCTTCGTCTCTATGGACGGGCTTTCTCTAGTTGTGGTGAGTGGGGGCTGCTCGTTGTGGGGCTTCTCGTGTTGTGGGGCACGGGCGCTAGGCCACGCGGGCTTCAGCAGCTGTGGCTCACAGGCTTAGTTGCTCCACGGCTTGTGGGTCTTCCTGGACCAGGGATCGAATCTGTGTCCCTTGCATCAGCAGGTGGATTCTTAACCACTGGACCACCAGGGAAGCCCTTTTTAGATTCTCCGTCTGTTTGGCATCCATTCATCACAGCACCAAACTAAAGCTCAAAGTTGTTTACACTTGGCTGTGATCCAGAGCCCACACTGAACCACTTCCTAGTCTAATCCTCACACACTGAACCAGTATTTCCACGGCCCTAAATCACCCCAGGGCCAGTGACCAAACAGGTAGCGACCACCTCTATAGCCAAAGCCCAGCTACATTATTCAAACTAGCCACTTCTCCACTGTTTCTTCTGCCAGGTCCTGCCTTTTCTGTGGAAGCCCCATCCAAGGCTCTGGCGGTGAGGCTCTCCCCTCACTCCCCTCTGCCCCCACCTCATTCTTCCCTGAGTGGCCCTGCGTGGTGTGGCATGCCCCATCCCCCCAGCAACTTCAGGCAATGAAATCTTCTGTCAATGGCATCATTGTTTCCACGTCATCACTTGGTCACCTTCATGAACTGAAATCCCATGAGTACAGCTGAGACTGATCAGCCCTTCAGGACTTTGCAGTCGCTGTTTTCCTCTGCCAGGAGCCCTCATCCCCTTGTATCCACATGGTTCCTCTGTCACTGCAGTGAAGTCTCTGCTCTGACATCACCATATCCAAGCAAGGCCTCCCTGAGCACCCATCTAACTAGCCTGCCGACCCCTCCCAACTCTAGATGCCTGTCTTTTTGTTGAGTTTTATTTCTCTAAATAGCTCTCATCACCACCTGACTCAGATGTGTTTATTTTGTATGTT TCONS_00015763 s 3' 20603 TCONS_00015763 s 3' 17594 EMBV3_01649 GAGTCAAAAAGGTTCTTCTTTCTAAAGAAACTACCCTCTTAGGCTGGACATAAAGGCCCT Gene BVV0102_047279 - 1 EMBV3_08873 GK000009.2:27540769-27991076 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12886 GGGTGACAGTGGAGACAATACTGGGCTGGTGCAGAGACCAAATACCGGGCTTAGACATAA Gene GeneID:100336726|LOC100336726:XM_002692615:2_cdna Constitutive 0 NULL GeneID:100336726 14 GENE LOC100336726 NULL serine/threonine-protein kinase MARK2-like EMBV3_10765 TGTTCGCCGGTGCGGTGAGAGCAGCCTCCGAATGGCCCTCTTGCTCCCGAACGTCCTGAA Variant GeneID:540278|MRPL35:XM_002691361:207_cdna 65^254 2 EMBV3_11857 GeneID:540278 11 GENE MRPL35 NULL mitochondrial ribosomal protein L35 EMBV3_24323 GACTGAGTGGTTGGATGGCAAGCACGTGGTCTTTGGCAAGGTGAAAGAGGGCATGAATAT Gene GeneID:281418|PPIA:NM_178320:4_cdna Constitutive 0 NULL GeneID:281418 4 GENE PPIA NULL peptidylprolyl isomerase A (cyclophilin A) EMBV3_26080 ACGGTCAGCTCCACATAGAGGCCTGAAGAGCAGGCGATAGTTCCAGTTTGGAGACAAGAA Gene BVT0102_131621 + 0 NULL GK000007.2:63886994-63991665 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14931 CCCTCCCCGCCGCAGCAGCACCGGCGACAGTGAGTGTGTCCGCTTGAAACCCACCGACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15737 TGACCCCCCTCTGCCCAGGTGCTACCAATGCAAAGCTGCTAAAGTGATCTTCCTCATCAT Gene GeneID:538781|GPR101:XM_002699608:162_cdna Constitutive 0 NULL GeneID:538781 X GENE GPR101 NULL G protein-coupled receptor 101 EMBV3_34434 AGTGGTTAAGACGCTAAGCTTCCATCCCCCTGGGACATGAGTTTGATCCCTGTTTGAGGA Gene BVV0102_051870 + 0 NULL GK000011.2:86601251-86617514 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30896 GTTCATGGCTGCAACTGCTAACTCCAGAACATGAGTGCAGGAGGGGCATTTTTGCACATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00385 GATCGCTCAGCAGCAAAAGGCTGAGCCAGCAAGAAAGTGAAGTTGGTGATGGCGAGAATT Gene GeneID:282874|EVC:NM_174747:10_cdna Constitutive 0 NULL GeneID:282874 6 GENE EVC NULL Ellis van Creveld syndrome EMBV3_37303 ATGGTGCAGGTCCTCACACAAATAACAGCACCAAGACGATGAGGGAACACGGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_02372 GGGAGGCTGGGGCCCACAGGAGCTCTGCAGGCCCCAGTGGATCAGGCCACACAGAGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34334 CACTTGGCAGAGCAGGGAGGAGGGGAAGGGATGCATGGTCACGGAGGCTATGACTCTGAT Variant GeneID:615724|C26H10ORF4:NM_001076392:231_cdna 191^260 2 EMBV3_27507 GeneID:615724 26 GENE C26H10ORF4 MGC139562 chromosome 10 open reading frame 4 ortholog EMBV3_41319 TACAAGCCCAAGTATCTTCAGCTCAAGAAGGGAGAGCAAGTTTCTGAAGCTGGTGGCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21337 AACCACCCTGGAAGTGGAGTTTTTCGCCTCTCAACTGCTCAAAGTTCTGCCCCCGTCATT Gene BVT0102_358625 - 1 EMBV3_13889 GK000017.2:74623252-74633531 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09969 TCTCAAGCACACATGGAAACTTCTCCAGGATAGATCACATCCTGGGCCATAAATCTAGCC Gene BVV0102_048762 + 0 NULL GK000001.2:130217038-130412834 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00010367 TCONS_00019963 TCONS_00019989 TCONS_00022064 TCONS_00166080 TCONS_00244651 TCONS_00224115 TCONS_00250553 TCONS_00229820 TCONS_00251853 TCONS_00124121 TCONS_00136829 TCONS_00165811 TCONS_00249014 TCONS_00031938 TCONS_00064816 TCONS_00198626 TCONS_00020176 TCONS_00090401 TCONS_00177994 TCONS_00210178 TCONS_00148277 TCONS_00023334 TCONS_00017462 TCONS_00244653 TCONS_00152648 TCONS_00199912 TCONS_00198662 TCONS_00055859 TCONS_00244654 TCONS_00250261 TCONS_00056147 TCONS_00111547 TCONS_00207067 TCONS_00254568 TCONS_00249913 TCONS_00197973 TCONS_00065822 38 XLOC_131641 XLOC_142855 XLOC_005918 XLOC_010641 XLOC_010667 XLOC_012735 XLOC_100918 XLOC_150512 XLOC_137411 XLOC_153496 XLOC_139314 XLOC_154794 XLOC_075673 XLOC_083040 XLOC_100651 XLOC_151957 XLOC_018183 XLOC_039540 XLOC_120280 XLOC_010854 XLOC_055182 XLOC_107767 XLOC_128688 XLOC_090159 XLOC_014001 XLOC_009039 XLOC_092413 XLOC_121564 XLOC_120316 XLOC_033667 XLOC_153204 XLOC_033950 XLOC_067447 XLOC_125586 XLOC_157500 XLOC_152856 XLOC_119632 XLOC_040541 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_30648 GGCTCACTTCATTGTGATGGTCTAGAACCAAACTCAACTATCTCTGAGGTTTACCTGTAG Gene BVT0102_127408 - 1 EMBV3_14763 GK000014.2:38543993-38554721 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053302 TCONS_00053303 TCONS_00053304 TCONS_00053308 TCONS_00053305 TCONS_00053307 TCONS_00053306 1 XLOC_031692 Coding TCONS_00053302 XLOC_031692 Coding Coding C14H8orf84 14:38552526-38562211 j TSS39348 2945 3 TCONS_00053302_2 95 0.156536502546689 4 0.696303180503924 0 0 0 0 0 2.99325218511022e-07 0 0 3.69989813785439e-12 0.00018082739626608 6.55837546935099e-12 1.42643416701354e-05 8.42400008348627e-13 9.6999304090402e-13 1.24920524468402e-06 1.86469324011918e-07 8.3141654455555e-06 4.26377998697184e-08 0 0 0 0.000604899835695721 1.03986277073898e-09 2.35584394114219e-08 0 0 0 4.70569661018915e-12 1.18314204090983e-05 2.17262688792042e-09 NM_001075869.2 SBSPON Bos taurus somatomedin B and thrombospondin, type 1 domain containing (SBSPON), mRNA. 0.0 1294 99.72 0.244821731748727 NM_153225.3 SBSPON Homo sapiens somatomedin B and thrombospondin, type 1 domain containing (SBSPON), mRNA. 0.0 1153 75.95 0.543293718166384 TCONS_00053302_2 sp|Q32L50|SBSPO_BOVIN SBSPO_BOVIN Somatomedin-B and thrombospondin type-1 domain-containing protein; 8e-66 202 100.00 0.989473684210526 0 noncoding 0 0 0 0 0.0287740619924396 0.846341668772588 0.0377633655752844 0.467834170569916 TCCTGTTTTTCCCGTTCTCATTTAGAAAGTCCCTGCCTTTATAACTACCTCTGCGTTCAACAAGGAGCGAACAAGACAGGCGGCCTCCCCACACTGGACCACAAGCACAGAGGATGCTGGATACTGTATGGAGTTCAAGACAGAGTCACTGACTCACCACTGTGCCCTGGAAAATCGCCCCCTGACCCGATGGATGCAATATCTCCGAGAGGGCTACACAGTGTGTGTGGACTGTCAGCCTCCAGCTATGAACTCTGTGAGCCTTCGTTGTTCTGGCGATGGCTTGGACTCTGACGGAAATCAGACCCTCCATTGGCAAGCAATTGGCAATCCTCGATGTCAAGGAACTTGGAAAAAAGTTCGGCGGGTAGAACAGTGTTCTTGTCCAGCTGTTCACAGTTTCATTTTTATATAGATCTTGATATAAATATTTTAAAATGTGTTTGTAAACATGCTAAATACTACCAAGTCATATTCGATGCTGCATAATCCTTTGAAAACTCTTTGGCCTAAAGTTCCTAAATGTATGTCTTTTCCACATTCTGAAGCAGAGAAAGGAAATTCAGGGGGCCAGTTCTTAAGAAACACAGTGCCTTTATTTTTATTTTTTACTATGTTGAGGACCCAGTCTAAAGTCTCCTGTAGTTTTCTGACCTTGGCCTGTCACTTGGAGTCTCCTCATTGAACAGGTAGTCCTCTGGACACAGAGTAAGTCTGTTTGCACTAAAATGACTACATTTTATTGGTCCACTTACTGGTAAGTTGTCATTTAAGGGTACTCATGCTTTGAATCTTGGGTTCTTTCTTTCTGTTCTGTAATCTCTTAAAAACTTCTTGCCTTAAAAAATGTCTACAGATATATGTACACTCACGCATGCATTTCCCATATATTATTCCACAAATTCTGCAATAATAATTTCAAGCAAATTTGTCACAAGTAATTTCCCACAGGACAAATTGTTTGAGATTTAGTAAGCAAAACCAACAGCTCTACTAAATATACCTTTTTTTTTTTTAATAGAAGAAATTTTCTTCTGTTAACTGAAAAGCGTCAATCAAATGTTCATTCTAGGTCAGTACAATTCCTTTAAATGTTTTAATTTCCATGAAGTGAAATTTTGGCAACGATAAGTGAAACAATTGCTTTAATTATGAACATTCTACCATCATTAGCATTGAAAATTATTTCCAAGGCATAAAGCCTGAAATTGACTACAATAATTTTGGAGTCCAACTTCAAGTTTAATTGAGGTAAACTTATTACTTTTTTTCCCCCCTATAGCACAGGTTTTCTTTTGTCTGGAGTAGAAGGTAGAGGCATAGATTATGGAAGGCATAGATTTATTACAGATGATATGATCCCCATCCCCACCCCAACTCTACAAACACAGAAGTATTAGTTTCCTTATTGTATGATTGGAAAATCAATGAACCAGAGACAAAAGGCCTTGTTGAAGAATCTGGACTGACAGAGCCAAATCTTAGCTTCTCATTCAGAATTTAGCTTCGATGAAGAGTCTAATGTTGCCAAAGACTGTTCTGTAAAAGCAAAGCCCTTTTTATTTCTGAAGCAAATTTTAAACTCAGAATATTTTCTTCAGAGAACTGAATCTGGAGATTTAAACTACAGGTAAACCTCAGAGATAGTTGAGTTTGGTTCTAGACCATCACAATGAAGTGAGCCACAAAATAGTTTTGGTTTCCCAGTGCATAAAAAAGTTACATTTACACCATATGTTTGCAGTCTATTGTGTGCAATAGCATTATGTCTAAAAAAAAGTACATAGCTTAATTAAAAAATACTTTATTGCCCAAAACTACTAACCATCATGTGAGTCTTTAGTGAGTAGTAATAGCAAAGATCACTGATCACAGGTCACCTGGACAAATATAATAATAATGGTGAAAAAGTTTGAAATATGCTAATAATCACCAAAATGTAACACAGACACACAAAGTGAGCAAATGATATTGGAAAAATGGCACCAAGAGATTTACTCAATCTAGGGTTGCCACAAACCTTCAGTTTGTAAAAAAAAAAAAAAAAAAAAGTAATATCTGCAAAGCACTATAAAATGAGGTGTGCCTGTATATGAAATTCCTTTGATTTCATATGTATAAAATATGATTTACTAAAATACCTATTTCTTGGCACTTATCATGTAATGAATGATATAATGACAATAGCAAGTTTAATAGGGATGGAAGAGTTCCCAATATTTAATGCTGAGAGTAGCAATATTTCTGAGAATGTATTTGTTTAAATGTCAGGACAGTTTTGGGGTAAACTAAATTCTTCATAAATTAACAATAAAAATTTGAGTCTCATCAGAGTTAGAAACTTCAACTATCAGCTCAGTATTAACATTTCAAGACCATTTCTAACATTTGTAAAACAAAACTTTTTAAGGCATACCTGGGCAATTTTCAATGTTACTTAAAATTTTATACCAGTAAATAAACTTTCTGTTCACATTTTGAAAAACTCTTGACTTGTTTGGCTAGAAAATACCGAAGTTTTCTGGACAAGTCAGAGAATAAACAAAAAATTTCACAAAAGCCAAAAGAAAACATTTTAGAATTGATAGGCATATGTATGATGACTAACAGCAATAATGCTATGATGTATTTATGGTTCCAATATGCTATAACATTCAGGATATTTGAGTTGTATAAAATCAGTTTTTCAAATTACATATTTAGCTTTCACTACATGACCGTTAATTATTTTCATATTGAAGCATATTTTTGTTATTTCTATTCTTATGAAGAATTTCAAGGGCTGGAAGACATAACTACTAAATAGTGATCTTGAAAAGCTTGTTATTACTTCTAGCAAAGCCCACAGAAACAGTACAAAACTGAAACAAACTGCAACATGTGGTCTAAATGATGAATGAAGAACCCTTAATTTTTTATTTTCAGAGATAAAGATCAAGGAATTT EMBV3_43659 CTCGGAGGGGCGAGTCTGAGCAAATATGCAAACCCACCAAGGCAAGATCCAGGCTTTTTT Gene GeneID:786025|BAHCC1:XM_002707764:296_cdna Constitutive 0 NULL GeneID:786025 19 GENE BAHCC1 NULL BAH domain and coiled-coil containing 1 EMBV3_19662 GGGCTGTATCAGTTGACTGAATTTGGCAGGAAACGGTTCTAGTCCACTACCAGGCCTAGT Gene BVV0101_086152 + 0 NULL GK000013.2:10763293-10806389 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04135 CATACAGCACCATGAATCGGCCACGGGTACACCTAAGACACGGACTTGTGAGAACACACA Gene GeneID:407176|KCNMB1:NM_001001141:2_cdna Constitutive 0 NULL GeneID:407176 20 GENE KCNMB1 NULL potassium large conductance calcium-activated channel, subfamily M, beta member 1 EMBV3_08491 GCTGTTTACAACCCCTTCCACCTTTCAGCGGGCCTGTCTGCCATCGGCTATGCCGCTGCC Variant GeneID:534894|PQBP1:NM_001046389:96_cdna 383^524 3 EMBV3_13462 GeneID:534894 X GENE PQBP1 MGC129091 polyglutamine binding protein 1 EMBV3_22195 CAAAGACGGTAAGAAACCTAGGACTAAAGCACCCAAGATTCAGCGTCTCGTGACTCCACG Gene GeneID:508628|RPS6:NM_001015548:5_cdna Constitutive 0 NULL GeneID:508628 8 GENE RPS6 NULL ribosomal protein S6 EMBV3_14027 ATGGACAACTATGCGGCCAGCTTCTCCTTGGTCATCATCTCTTGTATCATGTGTGTGTCC Gene GeneID:282368|SLC6A9:NM_174612:26_cdna Constitutive 0 NULL GeneID:282368 3 GENE SLC6A9 NULL solute carrier family 6 (neurotransmitter transporter, glycine), member 9 EMBV3_40755 CTCCCATGGGGAACTTCTTCCTTCCCGACGTGGAATTGTACATTTAAATTTGGTACGGTG Gene GeneID:537314|LRRC16A:XM_002697536:290_cdna Constitutive 0 NULL GeneID:537314 23 GENE LRRC16A NULL leucine rich repeat containing 16A EMBV3_43358 ATGGTCAGCTCCTGTTGTGGCTCCATCTGCTCTGACCAGAGCTGTGGCCGAAGTCTCTGC Gene GeneID:788228|LOC788228:XM_002695982:340_cdna Constitutive 0 NULL GeneID:788228 19 GENE LOC788228 NULL similar to keratin associated protein 4-12 EMBV3_31853 CCTGGTGGACCCATGTGGACTGGTGTCTGGTTTCAACAGGCCAATCCTGTTTACCTCATA Gene GeneID:511283|ARID3A:XM_002689144:134_cdna UTR3_Alt 2 NULL GeneID:511283 7 GENE ARID3A NULL AT rich interactive domain 3A (BRIGHT-like) EMBV3_04085 AGGGGGGTATTAACACGTCCTTTCCCACAATGGGGAGGTTGCCTAACATTCTGCTAACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08525 ATAGACCCATATAAGCTGCTGCCGTTGCAGAGGTTTCTACCTCGACCTCCTGGTGAAAAG Gene GeneID:515057|GAR1:NM_001035303:38_cdna Constitutive 0 NULL GeneID:515057 6 GENE GAR1 NOLA1 GAR1 ribonucleoprotein homolog (yeast) EMBV3_23107 AGCTCAGATAAATGCAGCCTCCTTGGAAAAGGTCAAACAGTACAACCAGAAGCTCAGGGC Gene GeneID:520704|PREX2:XM_002692685:72_cdna Constitutive 0 NULL GeneID:520704 14 GENE PREX2 DEPDC2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 EMBV3_27257 ATTTCCTATGCCTTCATCCTGTCCAGTATCCTCTGCATCAGTACCACAGAGGGAAGGTCC Gene GeneID:508589|LOC508589:XM_002699199:80_cdna Constitutive 0 NULL GeneID:508589 29 GENE LOC508589 NULL similar to olfactory receptor, family 8, subfamily A, member 1 EMBV3_26255 TGCATTCCAGGCAGACACTTCAACCTCTGAGCCACCAGGGAAGCCCATTGTAGCATGTGT Gene BVV0102_265933 + 0 NULL GK000007.2:5291296-5295331 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211576 TCONS_00211572 TCONS_00211575 1 XLOC_129916 NonCoding TCONS_00211572 XLOC_129916 NonCoding NonCoding - 7:5291531-5293871 - TSS158944 1216 2 TCONS_00211572_3 92 0.740131578947368 3 0.481402308678923 0.000533087764138682 0.000286709423205308 1.33702843725722e-10 5.3671281421587e-08 0.000131572748734632 0.000370643563114927 9.01829483968601e-05 1.17316484974632e-05 9.08296335995872e-05 6.76095800305467e-06 0 0 0 1.93357131890505e-05 1.77110527917742e-59 0.000347486372091901 0 0 5.64959744787634e-45 8.14317305116101e-05 0.000315069142412106 0 0 0 6.00559439049744e-05 3.85734276778068e-05 4.39774609609383e-06 0 1.59620073011497e-05 0 NM_001098464.1 C16H1orf116 Bos taurus chromosome 16 open reading frame, human C1orf116 (C16H1orf116), mRNA. 3e-72 277 90.64 0.166118421052632 0 noncoding 0 0 0 0 -0.376365415680095 0.22906060497364 4.27387732886975e-05 0.999301183388041 CTGGCCCCAGACCCCATTTGAGGGAGCCTGGAGCCAGAGAGTGAGCACTCCGAGGCTGGAGATACGCAAGAGGCGCCTTCCTATCTCTGGCAAAGGGCCCCAGGATTGGTCCAACATGTGTTCGATAAGAAATTATTAAGAGGGAGGAAGAGGAGCAGGTCCTGGCTGCACTTCAGTTTCCTCATCTGTAAAATGGAGGAACTACACCCGGGCTCGTCCAGCTGGGACAGGTCTGGGGAGCAAGGTATCCACCCCGCTAAAAATAAAAAACAGGTGTTCAAACAGGTGTACACCCTGTTTATAGTAGATCAAGACAATCACCAAAAGGTGGAGACAACCCGTGTCCATCAAAGGATGAGTGGATGAAAACAATCTGGAATATTATTGAGCCACAACAAAGAAGAAAGCAGTGACACATGCTACAATGGGCTTCCCTGGTGGCTCAGAGGTTGAAGTGTCTGCCTGGAATGCAGGAGACCCGGGTTCAATCCCTGGGTTGGGAAGATTCCCTGGAGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCCGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATGGGGTTGCCAAGAGTCGGACACAACTGAGCGACTTCATGATGCTGAGTGAAAGAAACTGCCTCGTGTATGAACCCACTTACATGAAATGTCCAGAACAGGCAAATCTCTAGAGTCAGAGAGCAGATTAGTAGGTACCAGGGCCTGGAGGGAATGGGGAGTGGCAGCTAATGGGAATGGATTTCCTTTTGGTGTGTTCGGAATGTTCCAGAACTAGAGGGGACAGTTGACAACATTGTGGTTGTGCTATCTGGCACTAAATTCTTTTGTATTTAAAAAAAATATTGTTTTATTTATTTATTGGGCTGCGGGAGGGATCTTTTCACTGTGGCATGTGGGATCTAGTTCTCAGATCCAGGACCCTGCATTGGGAGCCCTGTGTTTTTAGCTACTGGACCACCAGGAAAGTCCCTGAATTGTTTAAATCATTAACTTTCTGTTATGTGAATGTCACCTCAATTAAAAAAAAAAATATCTCAGGCCATTCACCTACTGGGGGTGGCCTCTGGCTGGTCTCCTAATTGCTTTGTTTGGAGGCCTCCACGGTGTAGAAGACCAGGGCATTGTAAATCACCAAATGACAGGGCCGCCTGCCTGGGGTTGGCCACTTAAATGGGGATCCCACC TCONS_00215220 r 5' 97 TCONS_00215220 r 5' 97 EMBV3_38368 GGCATCTAGGCTTCTCATTGTAGTTGCTTCTCTTGTTGCAGAGCATGGGCTCTAGACACA Gene BVT0102_044484 - 0 NULL GK000003.2:111148735-111179507 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06439 TAAGGAGTCACCCCCGTACCCTTCCTGTGACTTGCACTTTGGGATGGTGGAGGTTACTTT Gene GeneID:539807|ZNFX1:XM_002692498:610_cdna UTR3_Alt 2 NULL GeneID:539807 13 GENE ZNFX1 NULL zinc finger, NFX1-type containing 1 EMBV3_32471 TCAATTAAAGCCTGGCCAATGGCGGAAAGCTCCTGAGGAAACACACAGAGTTCGGGTTAC Gene BVT0102_205357 + 0 NULL GK000011.2:30169087-30534452 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00030891 1 XLOC_017143 NonCoding TCONS_00030891 XLOC_017143 NonCoding NonCoding - 11:30501195-30501640 - TSS21890 445 0.121348314606742 1 0 0 2.25806995859182e-05 0 0 0 0.000490337649699252 0 0 0 0 0 0 0 0 0.00044100636199566 0 0 0 9.66867019274128e-05 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.178040537244273 0.142746662906556 0.0216058343176187 0.640164026189547 GAGGGTTGGCAGATTTCGTATAAAAACAAAACAAAGTAGGAAGTATTTCTCAAATGGAACATTCTTATGCTGAAATTCGGCTTTAACTAGACACACTTGTATTTTATCTAGCAATACTATTTTAGCATTACGGTTACAACAATGTAACCGTGAAAAGAATTTAGCCCAGTCCATTGCACTTAGTGCGCGTTCTGGAGCTCCTTATTAAATTTTGGGTCTGATTCCCAAGCCCTTTTTTTTTTTTTTTAATCTCACTTTGAGCTTAGTTTCCACATAAACTTTCAGTTAAGCGAGGGTGATACTACTGTAAATTTCTATTAGTGCTTTACCGTTTCTAGAGCTCTTTCAATTAAAGCCTGGCCAATGGCGGAAAGCTCCTGAGGAAACACACAGAGTTCGGGTTACAGAGGGCGGTCGATGCACTCACAGCACTCGCTTCTCTGAC TCONS_00024585 . 5' 235 TCONS_00024585 . 5' 235 EMBV3_19320 TCGACAGCAGAAGGAGATTGGAAGAGGACTTGAAGAAGCAGGCGGCTGAGTATCGTGAGA Gene GeneID:282307|PIK3R1:NM_174575:63_cdna Constitutive 0 NULL GeneID:282307 20 GENE PIK3R1 NULL phosphoinositide-3-kinase, regulatory subunit 1 (alpha) EMBV3_17054 GTTTACCTAGTCTTCCTCGCTGAAGTCACCTCTGGAACAGTATACAAGACCGGCTTCTCC Gene BVV0102_185420 + 0 NULL GK000010.2:26684278-26702989 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020125 1 XLOC_010803 NonCoding TCONS_00020125 XLOC_010803 NonCoding NonCoding - 10:26702173-26702759 - TSS14015 586 1 0 0.000185743186092666 0.00173189638705521 3.15836464951732e-05 1.41708986367441e-05 9.26774966349181e-05 1.22083821021537e-05 9.95172348024307e-06 1.00933722450692e-05 0 0 0 0 0 3.21091803632076e-05 0 9.01420655441805e-05 0 0.00021408612953764 0.000330400296051731 0 0 0 0 0 2.36466464321e-05 9.61838486929181e-05 7.99884049758343e-05 0 0 0 0 noncoding 0 0 0 0 0.00217596905539717 0.988929414799991 0.0077029425376513 0.908745133610806 GAGGGTGGATTCTGCAAGGCAGCTTTCTGGAGAAGCCGGTCTTGTATACTGTTCCAGAGGTGACTTCAGCGAGGAAGACTAGGTAAACATCTTAACGTTTTAATCCATTTCTTCCTGGCATATTTTCACTCTGACTTTTCAGAGGTATTCCTTTGAGTTGAGTGGCTAACTGATGCCTTTCCTTTCTACTCTCCGTGGTCAGAACAGCCCTAACTTCCTCGTTTACTGCCTCTCTTTGAGCCACGCCCCCAGGTTCTGGGGCTAAGTTCGGGCCAATAAAGTTGCGCCCTAAGGATCGCAGGCCCAGGGAAGGGAAGCCTCCAACCAATGAGAGGCCAACTATAACCGCAAAGAGTAGAAAAGTCTTTTAGTGGTGTCTTCGGGCCGGTGAAGAGCAATGATTATGCGCCGGCTCTGGGCTAAGGACAGATTACTGGCGGTTTCCTGAAACACGTGACCAGTGAGCTGAAGCAGCCCTGCCCCACCTCCTGGTCTGGAGGTAGCGCGATGGGCCACACTTCCAATGGTTCGAAGAACTTCTCGTCACGTGCAGTTTTTGCAGGCCCAGCGGCGTCCTGAAAGTCAT TCONS_00013248 TCONS_00013249 . 5' 231 TCONS_00013248 TCONS_00013249 . 5' 231 EMBV3_19209 ACTATTCTTCGACATACTCTTCAGCTTCAAGGTTTGGATTCAGGATTTGTTCCTAGTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16428 ACACAGGAGAGGTGAGCCGGATTCCAGAGTTGTGAAGATCCCCTGGAGTATGAAATGGAA Gene BVV0102_031962 - 1 EMBV3_41707 GK000016.2:10061268-11057789 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34325 GGATCCTGACTTGAAAGAGATGACGGAAGCCACCAACGAGGAGGAAACAGAGACAAAAGA Gene GeneID:533847|ZNF532:XM_002697837:536_cdna UTR3_Alt 2 NULL GeneID:533847 24 GENE ZNF532 NULL zinc finger protein 532 EMBV3_22603 ACCTTGAATGTGAGAACATGGGTGGTGCCTGCAAGTATCAGAACACCCATGGGTGCGTCA Gene GeneID:100336328|LOC100336328:XM_002698627:4_cdna Constitutive 0 NULL GeneID:100336328 27 GENE LOC100336328 NULL hypothetical protein LOC100336328 EMBV3_10459 GCCAGGCCAGGAGGGTGGAGTGCTGGTCCTGGAGTGACAGACCTTGGCCCAGCTCCCCTT Variant GeneID:616333|TPRG1L:NM_001076418:213_cdna 708^858 1 EMBV3_34790 GeneID:616333 16 GENE TPRG1L FAM79A tumor protein p63 regulated 1-like EMBV3_30933 GCCCACTAGTCCATAGAGCAAGAAACAGTACCTATCTTCCCATTCCACGTTCTCCTTGTG Gene GeneID:512450|SH3GL2:NM_001076840:2_cdna Constitutive 0 NULL GeneID:512450 8 GENE SH3GL2 MGC140546 SH3-domain GRB2-like 2 EMBV3_21717 TGAGGGTCTAGGTCCGGGCAGCCGAAGAGTGTGGTTAGCAAGATGAACAAAGATGCGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02857 ATGCCTCCAAGCTGCAGTTCATCTTGGCAGGACCAGTGTGTGGAGATCACTGAGGAGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40550 AGCTTGCAAATCCCTCCAACACCCCTTGAGAAATAGGTACGTCTCCAATATTATACCCCG Gene BVT0102_046010 + 0 NULL GK000013.2:18038512-18047208 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044630 TCONS_00044626 TCONS_00044628 TCONS_00044624 TCONS_00044625 TCONS_00044627 TCONS_00044629 1 XLOC_026240 Coding TCONS_00044629 XLOC_026240 Coding Coding ACBD5 13:18045335-18076857 j TSS32763 3562 1 TCONS_00044629_3 488 13 0.887408394403731 0.000787828180262518 1.88099739094986e-06 0.000610812729947931 0.00027058515350417 0.000285873901055623 1.83820187351737e-28 0.000341338410236548 2.47259510082574e-07 0.00116221941482474 0.000386059794654114 2.58533913920896e-10 7.02433580550882e-05 0.000124017078978646 1.9952640313401e-19 0.000330961749831169 1.04350817719761e-06 0.000603315097250986 0.000790633846531813 0.00122826758056974 0.00154949184125646 0.000663285755127248 3.36698296825843e-05 4.97725960990426e-20 0.000620508063863112 0.00115305519468544 2.01523457752759e-16 0.000184863498201098 4.1391234230626e-05 4.58950141530414e-05 0.000211398050033677 XM_005214157.1 ACBD5 PREDICTED: Bos taurus acyl-CoA binding domain containing 5 (ACBD5), 0.0 6352 99.08 0.998596294216732 NM_001042473.2 ACBD5 Homo sapiens acyl-CoA binding domain containing 5 (ACBD5), 0.0 2960 83.11 0.799270072992701 TCONS_00044629_3 sp|P07106|ACBD5_BOVIN ACBD5_BOVIN Acyl-CoA-binding domain-containing protein 5; 0.0 972 97.19 0.997950819672131 1 coding 0 0 0 0 -0.0264198220020487 0.872780020017684 0.0188736030035618 0.711199387105433 GGGGCGGGCGTCGGGGACCTTAACGGACAGGCCTTGCCCCCGCAGAATCAAGTTTCATGCAGGCTCCTGGGAAAGCTGGTGCTGCTGCTGCTGCCTGATTCCAGGCGACAGACCTTGGGACCGCGGCCGGCGCTGGCGGCTGGAGATGGCGGACACGAGATCCGTTCACGAAACCCGGTTTGAGGCGGCTGTGAAGGTGATACAGAGCTTGCCGAAAAATGGTTCATTCCAGCCAACAAATGAAATGATGCTCAAGTTCTATAGCTTCTATAAGCAGGCAACTGAAGGACCTTGTAAACTGTCAAAGCCTGGCTTCTGGGATCCTGTTGGAAGATACAAATGGGATGCGTGGAGTTCTTTGGGTGATATGACCAAAGAGGAAGCCATGATTGCTTATGTTGAAGAAATGAAAAAGATTCTCGAAACTATGCCGATGACTGAAAAAGTTGAAGAATTGCTACATGTCATTGGTCCATTTTATGAAATTGTAGAAGACAAAAAAAGTGGCAGAAGTTCTGATTTAACCTCAGATCTTGGTAATGTTCTAGCTTCTACTCCAAATGCCAAAACTGTTAATGGTAAAGCTGAAAGCAGTGATAGTGGAGCTGAATCTGAGGAAGAAGCAGCCCAAGAAGACCCGAAAAGACCAGAACCATGTGATAGCGATAAGAAAATGATGAAGAAATCTGCAGACCATAAGAATTTGGAAATCATTGTCAGTAATGGCTATGATAAAGACAGCTTTGTGCAGGGCGTACAGAATAGCATTCATACCAGTCCTTCCCTGAATGGCCGATGCACTGAGGAAGTAAAATCTGTAGATGAAAACTTGGAGCAAACTGGAAAAACTGTTGTCTTCGTTCACCAAGATGTAAACAGTGATCATGTTGAAGATATTTCAGGAATTCAGCATTTGACAAGTGATTCAGACAGTGAAGTTTACTGTGATTCCATGGAGCAATTTGGGCAAGAAGAGTCTTTAGACGGCTTTATATCAAACAATGGACCATTTTCCTATTACTTGGGTGGTAATCCCAGTCAACCGTTGGAAAGTTCTGGTTTTCCTGAAGCTGTTCAAGGACTTCCTGGGAACGGCAGCCCTGAGGACATGCAGGGCACAGTGGTTGAAGGCAAAGGTGAAGTAAAGCGTGGGGGAGAGGACGGCGGGAGTAACAGTGGAGCCCCGCACCGCGAGAAACGGGCTGGAGAAAGTGAGGAGTTCTCTAACATTAGGAGAGGGAGAGGGCACAGGATGCAGCATTTGAGTGAAGGAAGCAAGGGTCGGCAAGTGGGAAGTGGAGGTGATGGGGAACGCTGGGGTTCGGACAGAGGCTCAAGGGGCAGCCTGAACGAGCAGATCGCGCTTGTGCTCATGCGCCTGCAGGAGGACATGCAGAACGTCCTCCAGAGACTCCACAAACTGGAGATGCTGGCGGCATCACAGGCAAAATCATCAGCATTACAGACCAGTAATCAGCCCACTTCACCGAGACCATCTTGGTGGCCCTTCGAGATGTCTCCTGGTGCATTAACCTTCGCTATCATATGGCCTTTTATTGCTCAGTGGTTGGTGCATTTATATTACCAAAGAAGGAGAAGAAAATTGAACTAAAGAAAATGACATTTTGTTGAAGAAATCTACTGGCCCTGGATAACCTCGGGATGATACCAATTGTGGAGCTTACACGAAAATCCTAGTTTGTGATGATTACATTTTTGTTGTCCAGTAGTTTGGTTTGTGTACATATATATATATATATATTTTGCACTACACAAATGATAAACATTTTAAGGACTAATATTGCTGATACTTGAATAATCAATCTCAACTAGGTGATAAGTAGCATAGATTTCCCCTAGCCTTGACTTCGAAGGACATTAAATTATTAATTACTGTTTGGTAACATGTTTACCTGATTATCTCCCATAGAGAATGATAAGCTGCTTTTCCCAGGTATAGTTGTGATGATGAGAACAGATTTATAACTGGGTATTTTTAACTTTCTAAATTAAATAGGAGAAAGTATGCAAACCAGGAGTGAATTTCAACTAATAAATCAACCGTCTTTTTAAGTCACTGAACCTCCATGCAGTTTACTAGAAAAAGACTGGAAGAATCTTCTCCACATCCACTCTGTGGGCTGCTCAAGATCCCACTTGGGCATGCACAGCTCTGACTTCAGTGTTCAGGCATCATGACAAAGCAGAGCCCTGTGTACTAGGCTTCATTTTTACAAATGATTCACAGAACAGACCTTACCGGCTAATGGAAATGATGAAGAGTGGGCTTAAAGTAGGTTTGTCAGTGTGTTCTGAGTCTGCAGATCATTAATAAGATTTGTATTCAGTTATATACATGGATTCCTTTGTAATCATTTTCCTTTAACTGAGAATATCTTGTTTCTGCTTCATAGGGTGCTTTGAAATATAAAATGAAAACTTATTTATACTGTTTTTACAAAGGTCAAAAGGAAACACATGAAAAATCACTTTTCTGCAACTGGTATAAACCACACAGACCGGACTTTTAACCTCTTAGTGCCTCAGTTTTTCTTCGGGGTATAATATTGGAGACGTACCTATTTCTCAAGGGGTGTTGGAGGGATTTGCAAGCTAGCAGGCCATAAGCTTCTATTTGAATAAGACACACCCAACTAATGTAAATTTAAGTGTCTCTCCCCAACCCCCCACCTATAGATTAAGAAGAAGACTGTAACTTAGATTCTTGAAGGCTTTCTTTGGAATTGTCCTTCCTGTATACCTTTTGAAACTCCCTGCTCATGTAGATGTACCTTACTTATACTTCCAAGATTTCTCTGATTCAAAGGCTTAGTATCAAATGATTTTTAAATATTCTTGGTATGTGTGATGTTGGCTTTAGCATCATGTGTTCAGAGTGTTTTTGATAAGAGAGAAAGTAATCTGTCCCTAGTATAGAGGGTGGTTCTTTGTTTACCTGAAGAAAAAAAATATGATTTGCTTTTCTGAAGACTGTTTTTTCCCTTGATTTTTTCTTACATGTAACTTGGTGTTTTTTTAAAAATTTTTAATCCCATCTTGATTAAAATGTGTCTGTCTAAATGGATCTACTGATTATTTGCTTTTAAAAAGCTGTCCTCTATTTATTTAGGGGAAAAAAGTGAAGCCAGTAACTGAATTATATGTAACAATAAAATTTAAACCTGTGGATCTGGAATTATTCTAAAAAATTAGCCCTCTATCTGGTATCAGAAAATGGTGGCTTTCCTCTTAGTATATAAGGAAATAAGATGCAGAGTAAGAATGTAAGCAGTTGTGATTCGTGACAAGCAGTTGGAGGTAACTAGCTCCTAGGGATAACCAATTGTATCCTATTCCAAAGTCTTATTTTATAGTTTGAAAAGCACTTTGCACACTGTTCTTGTATATACAAGTAAAGATGTAATTACATGACATAGTGTTACTGCTTTGTTTAACAAGAATCTCATTTAAGATTGACAGCTATGGTATTTTTTTAATGATAATACTTTTCTGTTTCTTTACTGTAAAATTAAGTTAAAAATAAAAGGTTAATGAGAATTGT EMBV3_16549 TGAGTCACCGAGAGAAAGCCTGGACATAACTAGAGCCTGGCATGCAAACCATGATTGAGG Gene GeneID:509040|APCDD1:XM_002697746:250_cdna UTR3_Alt 2 NULL GeneID:509040 24 GENE APCDD1 NULL adenomatosis polyposis coli down-regulated 1 EMBV3_18767 TCCCCTTTGTTAAAGGACAAGAGGTACAGAAGCTCTCAGGGAAAACCCAAGTTAGATGTC Gene GeneID:506007|PEX12:NM_001083378:215_cdna Constitutive 2 NULL GeneID:506007 19 GENE PEX12 MGC137914 Peroxin-12 peroxisomal biogenesis factor 12 EMBV3_30280 TAACGGCTCCATTTGGGCGAGGTTTTCTCACAAAGCTTATTCCCGTCACATCCCAGGGCA Gene BVT0102_254234 + 0 NULL GK000018.2:13079897-13186022 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088535 1 XLOC_053322 NonCoding TCONS_00088535 XLOC_053322 NonCoding NonCoding - 18:13080181-13081632 - TSS65881 1451 1 TCONS_00088535_2 167 0.062026188835286 1 0 0.0039851390546667 0.0033310137821289 0.0039477808437701 0.000881350557855476 0.00214704639169163 0.000515234376836926 0.000848029464379968 0.001324798773063 0.000891787217263068 0.000944259883195997 3.470853809074e-05 0.000118286044279808 0.000179948060110318 0.000188029680705383 0.000699919909847626 0.000236630372770249 0 0 0.000850035294648756 0.00397485597748533 6.06726950868797e-05 0 0.000227612919640002 0 0.00268354232213629 0.00285994131771866 0.00140926556356329 6.61970012862702e-06 3.68026932579955e-05 0 0 noncoding 0 0 0 0 -0.0383302174012999 0.782831371460829 -0.0190369487700163 0.711546761225875 CCCGGGCCATGCCGCCGCGCCGCCGCACTGGGCCGACGGCCGTTACCCGGGACAGAGGCCGCTGCAGCTCGGGAGAGGCGCTTGGAGAGGGCTCGGGAGCGGGCGGCGGAGGGATCTGTGCCGGCACTCGCCGCGGCCTCGCGCCTCTGCTTCCAGCGCCGCGGACGAATCCGGGCCGAGCGCCGCGTTCGCAGCTGACGGGCGCCGCGACGAGGCGCAAGTGGGCGGGGAGGCGGCCTTTCACGAAAGCCGGGCGGCCGAGCCCGCCCCTCCCTCTGATTGGTCCGCGCTGCGCCTTCTCGGCCTGCGATTGTTCCGGATCCCCAATCCAATGCGCCTCTGCCGCGGCCACGCCTCCCCGGGGCTGTCGATCATGTTGGAACCTCCCTGGCCCGCCCCGCGGCGGCCGACGGAGTCAATTGGCCGGCGGGGGCCGGGTGGGCCGAAAACCCGAGGCGGATTTATGGTTGCTTTTGTTCGCGCAGATTTGCGTGGAGCATTGTCTTAGGTGAAAGCCGGGCGTCCGGCCTTCCTGTTTTATTCCTGAGCGTCACAATAGGGAGGTAGTGGGTGTCTTCGAAAAGCCGCTGGGAGAGGGCCTCCGGAGACCCCCCCGCATCGCCATTCCCGCTCTGCTTCTGCGAAGCTTTGTGACCTTGGGCGAGTGGCTTGGCCTCTCTGAACCCCGGGTGCTTCCACCGAAAGTGAGGGTGACCACAGGCCGCCTCCGGGGGCGGCCCATGAGAAAGTCGTGAGCTCACAAAGGCCTGGCGCCCGCATCCCTGAGGCGGCTGGCCTGCCCTGGGATGTGACGGGAATAAGCTTTGTGAGAAAACCTCGCCCAAATGGAGCCGTTAGGCCGGCCTCCTTTCACGAGTCACTTCCTCAGCTTCGGGAGCCCAGAGGATAAGAGCACACCGGCCAGGGTCAGGGAGCATTTCCATTGGCCCGGATTGCGGGTTGGGGACAGGCGGGGGAGAAGGTGGTGGCCCAGCCATAACTGCGGGCAGCGGTCTGCCATCTCCAATAAGGAAACCTAGGCCCTGGGAGCAAGAAAGTCATTCTTCCCGGCCCTTCCTGTCGATCCGTCCATCTGGCCCGCTTTTGCATTCGTTCAGCAGCTCTCCGGGGCGGGGCGGGGCGGGGCGGGGTGGGGGGGGCTTGCGAGTCAAGCCTGCCTTCGCGCCTGTGGAGCCAACAGCCTGGTGCCGGGTACTAGGCAATAGAGATTGATTGAGTAAATGAATGCATTTCTTCAGGATATAGTCCAAGATACAAACCTCCTAACGACGTTCTCCAGCCTTCAGACTTCAAAGTTGCACAGATATTGCAGAGCCATAGTTGAGGGGTGAGGGGGTGGGGGACACAGTTGCTTCCCAGTCTTCCACCCCCTCCACTCTTTGGGCAACTTTTCCTGGAACCGCCTGCTGTTCTTGGCTGCTGTGGGAAGG TCONS_00085455 TCONS_00085456 . 5' 231 TCONS_00085455 TCONS_00085456 . 5' 231 EMBV3_36457 CTCATATTACAGGTGAAGAAACTGAAGCCCAGAGATACGGGACAGTTTGCCTGAGTCCAC Gene GeneID:288380|NDUFS1:NM_174820:17_cdna UTR3_Alt 2 NULL GeneID:288380 2 GENE NDUFS1 MGC140590 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) EMBV3_21624 TGCATCAATTCCACAGAGCCATTACTACAGCCTTCCTCTGATGCACAGGATAAGCAGTGC Variant GeneID:533927|TSNAX:NM_001076006:87_cdna 455^582 3 EMBV3_10305 GeneID:533927 28 GENE TSNAX MGC142669 translin-associated factor X EMBV3_26054 GCCATCCCTCCTAAGAATCTCTAAAAACTTGAAATGCTCGCCAAATGTCCCCATGGGATT Gene GeneID:539601|FCHSD2:XM_002693439:82_cdna Constitutive 2 NULL GeneID:539601 15 GENE FCHSD2 NULL FCH and double SH3 domains 2 EMBV3_22799 GACCGTCACCAACTGGTTCAACTATGAAAGTGCCAACATCGAGACCTTCTTCAGCGGGAG Gene GeneID:504658|SERINC5:XM_002690460:352_cdna Constitutive 0 NULL GeneID:504658 10 GENE SERINC5 NULL serine incorporator 5 EMBV3_37869 CTGGTCATTGCACGGTCCTGGTGGAAGTTCTAGACCTGAATGACAATACCCCTGAGGTAA Gene GeneID:787381|PCDHA11:XM_002689249:143_cdna Constitutive 0 NULL GeneID:787381 7 GENE PCDHA11 NULL protocadherin alpha 11 EMBV3_05596 CCCTCACCGGCCACCTGAGGACACACTCCGTCATTAAAGAAGAAACTAATCACAGTGAAA Variant GeneID:541154|IKZF1:NM_001105257:5_cdna 578^703 1 EMBV3_07598 GeneID:541154 4 GENE IKZF1 MGC152552 IKAROS family zinc finger 1 (Ikaros) EMBV3_11427 TGAAGGAGCTCTACGACCACGCCGAGGCCACAATCGTCGTCATGCTCGTTGGTAACAAAA Gene GeneID:506482|RAB25:NM_001017936:88_cdna Constitutive 1 NULL GeneID:506482 3 GENE RAB25 MGC140813 RAB25, member RAS oncogene family EMBV3_12166 CACTTAATGCAGAATGGTAGAAAGTAGGAATGGTTTCCAGGTTAGGATGATACACTGCAC Gene BVV0102_435325 - 1 EMBV3_20830 GK000011.2:66788488-66837189 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028131 TCONS_00028129 TCONS_00028130 1 XLOC_015415 Coding TCONS_00028130 XLOC_015415 Coding Coding FBXO48 11:66835548-66840282 j TSS19798 2555 1 TCONS_00028130_3 155 0.170254403131115 4 0.461018381576167 0.000839280670049921 0.000394546460509533 0.000520643155887845 0.000309686068086427 0.000390068548036139 4.16435886246079e-09 0.000187689451365897 0.000255318597320215 0.000356113136464021 7.64459475097867e-132 1.10589706461924e-19 1.2032272109111e-16 7.88261652537278e-06 7.0512541136125e-27 5.14672758225813e-09 0.00010939220797547 0 2.82219839832362e-08 6.14824739996307e-05 9.75766048317504e-05 0.000122034456095573 6.18244459673043e-13 9.87546587033185e-16 1.35076941234672e-16 0.000357897845974781 0.000211344481432241 3.96665328050764e-05 2.0327621207764e-15 1.30368292702131e-12 1.22790140630077e-13 XM_005212889.1 FBXO48 PREDICTED: Bos taurus F-box protein 48 (FBXO48), transcript variant 0.0 4381 100.00 0.950293542074364 NM_001024680.1 FBXO48 Homo sapiens F-box protein 48 (FBXO48), mRNA. 0.0 1186 75.96 0.640313111545988 TCONS_00028130_3 sp|Q5FWF7|FBX48_HUMAN FBX48_HUMAN F-box only protein 48; 3e-95 276 86.45 0.993548387096774 2 noncoding 0 0 1 0 -0.0211021874468005 0.870519822451213 -0.0214930295257179 0.717744148569405 GTGCGAAATCCGAGTCAGCAAGGCGGGGCTAGAGTGGGTGGGAAGACAGGGACTAGAGGGAAGGATTCGAATTCTGGACAATTTAAATCGCGAATCGAGAGGTAGCAGCTGCCCAGTAGGTAGGAGACGGGTCTTCCCTTTACGCTGAGATCTGGCAGGCGTGATCCGGGGCGCGGCCCTGGCGCTCGCACAGCCTCTGTTCGGCCGACCGGAGCTGCGGTGACAGTCGGTGCTGACAGTTGTTATTGTTTACCTGTCAATGCCCAGGTTGCTTTCTTACTTCCCCAAACTCTCAAGAGGAAATCTTATGTTGAACTCAGACATTAAAATTCTGACCACTGTAGCCAACTTGGATCCATAACCAAATGAACGGGAGCATCTGTGGTCTTGGCAGGTTTAGAAATATATAGGTTATTTATGAGGATAATTCACTAAAATACCAAGCTATGAAGAAAAACTCCAAGAGAAACCATGCTTCAAGAGTTTCTGACATAGAATGGAACTCTGTGGATGCCGAAAGGGAAAAAAAAGAGTGTCCAAATAATTTTGTTGAACTGCTGCCTCCAGAAGTTACTTTTAAAATTTTCAGTCAGCTAGACATCCGGAGCTTGTGCAGGGCTTCAGTGACATGCAGGAGCTGGAATCATGCAATAAGACACAGCGACTCCTTATGGAAACCTCACTGCCTGACTGTAAGAGCTGTATGTCAAAGAGAGATAGACGACGATCTAGAGAGTGGTTATCCCTGGAGGGTCATACTACTGAGGAATTACCAGAAGAGTAAAGTGAAACATGAATGGCTAAGTGGCAGATACAGCAACATATGTTCTCCTATCAGCCTACCAGAAAAAATCATGTACCCAATGGATGCAGACACGTGGGGGGAAATTCTAGAAGCAGAACTGGAAAGATAAGCAGAAAACTCTCCTAACTTTGAGAGTTTAAAACTAAAATGACTCTTAGATTATAAAAAGTATGTCTCTAACTGCCCATTTTTTTTGTTTGCCTTTTTACTATTTAACATTTAAAAGAAAACTAAATAGAAAATATAAAAAATAAAACTTTGTTTTTATTTTGCACTTTAGGTAAAATAATGTTTTATCTAAATGTTTCTGGTTTTACTGTAATGTGGAAAAACCATGAAATGTTATTTATTTAAAAATACTATACTGATAGGGTGATTTCAAAATGTATTATTTCATGTATTTGTGTTGGTCTGTTGCAGTACTTCAGCATTTTAATGATTAGAGAGTTTTATTAGTGTTCTCTGCTTAATGATAATTTGAAAATTCAAGAAACCATGTGAAGGAACTGATTTAGAGATTTATTAATTGTTAGACATAGGCTTATGGGCAAAATCCCTAAATGAAATTAATAGCAATATGTTTAAATGTATAATAAATGTATATTTTAATAACTTAAAATTTTCCATTTCAGTGCAGATTGAATTGTCAAACACTGAAAACATTTTGTGTTAAACATGTGGTTTAATTTTAAATGAGTCCAACCAGACTCATTTGTGAGATTAAGTTCCCCATTACTTGCCTACAAACCTCAGATTACTCTCAGGGGCTGAAATGTATGGAAAGTGCCATCAGAAACTCCACGCTGTTTTTCTTGGTAAAACTTATCTTCTTTCTGACATCTTATAGCACCATCTAGTGTACTCCTTGTAGATAACCAAGAAAAAGGACCAGCTCCTTTTTGGTTTTCCACATTTAAAAGAAAGGAAAATATTATTTACAAGAAACCTATATACTTGAATTTGTTAGAATTTATAGCTTTATAGGAACCTTTAACTTTTGTTCTCTTTTACTTAAAAGTAGATGACACATTACTCACGCTACGAGATTGTTCAGTCTGAAACTGTGATCAGCACCATAGGTAACGTGACTACAAAACATTTTAGTTAGTATGGGATTTTCTTCTTAAATTATGCTCTATTGCATGAAAAGTAAGAGTCCAGGAACTCAATATTTAACAAGTAGAAAAATATGAGGAATATGTCCCACTCTATACAGATTCCCTTTGTTGAATCAAGTAGGTGATGACTGGTTCAGTTCAGTTCTGTTCAGTTCAGTCACTCAGTCATGTCCAACTCTTTGCGATCCCATGGACTGCAGCATGCCAGTGTTATCTCCTACTGTCTTCTTGGGGTTGGAAGGGACCTTGAAGATCAGGCAGTCCAGTCTCTAGGATTATTCAGTAATCCCCACTATAGGAATGTTCTTCTTTTCACTCATCAGCAATTTTCTTCGTAAATTCTTTTGTGCAGTGTATCATCCTAACCTGGAAACCATTCCTACTTTCTACCATTCTGCATTAAGTGACCCTTTTAAGGTTGTGTAGTTCTTTGTACATACCATTCTCAAAGCTGTCATACTACATTAAATTTTCTGTTTGATTTGTGTATCTCCCCCATTAGATTGTGAGCCTCTTAATGGCAGGGACCATTTATTTATTTTTGTGTTCCCAAACCTGGAATATAGTAGATATTTCATAGAATTGTTAAGTTATTTTTATATTATTTATTTTAATCCTACCCAGAATGTAAA EMBV3_36931 CCCAAACTCTTCACACTTACAAGTTTGTTAATTTTTAGTGCTCATTTCCAGCCTACCCAC Gene BVT0102_021307 + 1 EMBV3_37378 GK000003.2:51112406-51195434 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13251 CAGAATTCATGTAAGGAGTCGTGCATTGATAATATGGGGAAGAACGTCTGGTGGCATGCT Gene GeneID:538831|LOC538831:XM_002690951:304_cdna UTR3_Alt 2 NULL GeneID:538831 10 GENE LOC538831 NULL similar to CG11877 CG11877-PA EMBV3_15048 AGATCCCGCCTGCCTCACGGGGCAGCCAAAAAGTAAATATTAACAATAAAAGGGGGAGAG Gene BVV0102_059426 + 0 NULL GK000025.2:34684766-34700879 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43575 CACATGGAAACATACTTATCACTTTGCAGAAGGGGGCAGCTGAGGCGGAAACTTCAACAC Gene GeneID:790191|UNCX:NM_001083803:359_cdna Constitutive 0 NULL GeneID:790191 25 GENE UNCX NULL UNC homeobox EMBV3_08837 ACCAGTGTTCTTTTTTGCCATGGAGTCAGGGTGCGGCTGGATCTCTCTTTGACTTACATG Variant GeneID:615350|LOC615350:XM_002698065:39_cdna 722^838 1 EMBV3_08529 GeneID:615350 25 GENE LOC615350 NULL similar to LOC90835 protein EMBV3_29680 AAAGCTGCATGAATACGTTTGCCAGCTGGTTTGGCTACATGCCGCTGATCCACTCTCAGA Gene GeneID:538602|EXT1:NM_001098095:55_cdna Constitutive 0 NULL GeneID:538602 14 GENE EXT1 NULL exostoses (multiple) 1 EMBV3_23894 CCAGCTTCAGCTCTACCTAATCTCCCCGAAATGGCTTCTGGTTCATCACTGAAAAGCCTC Gene BVT0101_023465 + 0 NULL GK000005.2:120780158-120825478 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193754 1 XLOC_117580 Coding TCONS_00193754 XLOC_117580 Coding Coding LOC531175 5:120776793-120784112 j TSS144745 4598 1 TCONS_00193754_1 298 0.135493692909961 3 0.372096201147855 0.000101306433627052 0.000208391604826419 0.000423170912134737 0.000404552239073676 7.08263711276815e-05 3.8119972358012e-05 8.37087068313288e-05 0.000115773031948134 0.000152723394902568 6.62184419394589e-05 6.07062172549213e-07 2.33298272228419e-06 0.000129797779195332 3.47838166961899e-05 0.000331365835700163 0 0 0 2.2720875447806e-05 0.000469993241709235 5.83097079953058e-05 0 0 0 0.000183835073614225 0.000183817385855596 9.81195626945726e-05 0 0 0 XM_005198543.1 LOC531175 PREDICTED: Bos taurus palmitoyltransferase ZDHHC3-like (LOC531175), 0.0 2316 100.00 0.27903436276642 NM_027306.3 Zdhhc25 Mus musculus zinc finger, DHHC domain containing 25 (Zdhhc25), 1e-33 150 68.46 0.0922140060896042 TCONS_00193754_1 sp|Q8R173|ZDHC3_MOUSE ZDHC3_MOUSE Palmitoyltransferase ZDHHC3; 1e-59 196 41.04 0.822147651006711 1 coding 0 0 0 0 0.140475002694619 0.49577071037141 0.0153376761767678 0.746302915645665 ATGGCCTTCCAGCCAGCCCCCATTGGAGGGCACATTCTAGAACACTGCGGTGGGGAGGAGGGGAGTCCCAGGCGGAGCCTGGGAGGGGAGGGCAGAGGCGCAGGAGCTCAGGGACCAGCCGACCTGGCCCTGCGGAGCCCGAGCGCCGCGCCGCGCGTGTGGTTCGTGCCCGACGCCCTGGGCATCGTGTGCGCCTCGGCCACGTGGGTGCTGACGCTGAGCGAGGGCGTGCTGCTGCTGAGCGCCTGGCTGCTCCCGGCGCAGCGGCCGGCCTACAGCGCAGTGCACGGCTCGCTCTTCCACCTGCTGGCCTCCCTGGCCCTGGCCTCCCACGCGCGGACCATGTTCACCGACCCCGGCGCCCTGCCGGTGGGCGCCCCGCCTGCGCCCGGCCTGGCAGCCCGCTGCCCGCTCTGCGGCGCCGTCCAGACGCCGGGCGCGCACCACTGCGGCGTGTGCCAGCGCTGCATCCGCAGGGCACACCACCACTGCCCGTGGGTCAACAACTGCGTGGGCGAGGACAACCGCAAGTTCTTCGTGCTCTTCACGCTCTACACGGCGCTGGGCGCGCTGCACGTGCTGCTGCTGCTCTCCGCGCCGGCCCTGCGCGCCTACGCGCGCGGCGAGTGGGACCTGCAGACCCCCGTGCTCCTGCGGCCCTCGCTGCTCTTCCTCTTCGTGGTGGCGCTGAACGGCTTCCTCTTCGCTGGCCTGATGTTCACGATTCAAATACGCAGCATCCTCACCGACCCACAGAGTCAGCCGGGCGAGCCGGGCCAGGCGTCCGCGTGGACGAACCTGAAGGCCGTCCTGGGCCCGCGCCCCTCCCCGGCCTGGATCAGCCCCTTCGCCTCCGGGGGACCTCGGGCCGCCAGCGGGCCCCAGGCTGTGGTCTGAGTCCGCCTGTGTGAAAGCAGCTCCCTCCGCGGAATCGGAACAGATGATCCTCAGAAAATCGCCGCGAGACTGTAAACGCCAAGCCGCCTTTTCTCGTGTCCACCGACGAGACCCCCACAAGAGAGAATAAAAGCGCCAGGTTCCCCTCTGAGCAGCAGGTGGGGTTTAGGGCCTCCAAGCTTCCAAGGAAATACGCAAGACCGGCCCCTCCCCGCAAAAGAAATGCGACATGTGCCCCTTCTTTCACTCTGCCAACACTCTCCTGGGAAAAGCGATTAAATCCACAACATCTGTGAGCAAAGTATGGTGAATCCGTGCAGAACCCCATTACAGGTGGTAGCTACACACCGAGGCAAGGGTGTGACCGCCTGCACGTGGCCCGTTGTGAGCTGCCTTATCTGATGCAGAACCATCGTTGCATTCCTGGTTATCTCAGCTCCTTAATGAGGGATTATGCTGTATAATGTGTCAGTTTGGGTGAGTTCCTATTTTATTTAGGATTTTTGTATTTATGCTCATCGATGAAATGAGCTTAGAAATCTCTATTCCTTTGCTAACTTAATCTGTTTGTAATTTACCAGACCCCACGACGCGTATCAAATGAGCAGGGCGGATGTGGCTCTTTCTGTTTTCTGACAGCCTGCGTGAGGTTGGCACCAGCGCTTGAAAATTTGGACCTCACCAGTCAAGCCATCAAGGTTGGGTTTTCTTGTTTAACTTTTTATTTTGAGATACTTATAGGTTAGAATGAGGTATTGGATGGCATCACTGAATCAACTGACATGGGTTTGCACTAACTCTGGGAGGTCGTGAAGGGCAGAGGAGCCTGACTTGCTGCGGTTCGTGGGGTCATGAAGAGTCGGACACAGCTCAGCGACTGAACGACGACAGATGCAGTGGTGAGGGGTCATAAAGGGCTCCCTGCCCGCTTCGCCCAGCTGCTCCCGTGGTACCAGGCAGGAAAGGCGCCTGACTGCAGCCTCACGTCCGACGGCAGTGCCAGCACACTCCTTTGACCCTGTTCACAGTCCCTCGGTTTTACACGCACGCGCTTGTGTCTAACTTGCTCATCTTCACACCAAGCCTGAGGCAGCTAGAGTTTTCAGCCCTGCTTTAGAGATGGGAAGACAGAGAGATCGAGCAAACTCCCCAAGATGATACAGCAGTACCTAGTAAGGCTGAGAACTGGACCCAGACAGCCTGGCCCCAAGCCGGGCACCTCCCCACCACGCTGCCATGCACGGCCGAGCAGAAACCCAAGAGGGACTGGCCCCGTGAGGACGGCCTCACAGCCACGTAAGCACAGGGCGAGCCCTCTTCTGATGCGGACGGCTGACCTGTGACTGTTCATCCCATGGGTGCCCGCAAGGCACAGGGGGGCAGGGTCCAAGTTTGACAGTGAACACACAGCCCTTCCCCGGGAGGCTTTTCAGTGATGAACCAGAAGCCATTTCGGGGAGATTAGGTAGAGCTGAAGCTGGTATGAAGTCTGTAAAACAGAGTGAAAATGTCACAGGTGAGAAGGCTTAGCCAGGAGATAACATCTGTGTCCCAAAGCCCCAGATCTCAGCCAGCCGCTGGGAGGGTTCCCAGTGAGGCTGGTCCAAAGGGTGATGACCCACGGAGGAAACGTCGTGCAGGCCACTGGGCTGCTGGTGAGGGTCCGGAGTAATCAGCAGGCCTGGTTGCAGGTGGGGAAAAACATGGATGCTTTGAGACGGAACCACGGTCTGGATCCCTAAGTACTCATGGGATTATAGCCTTTTAAGTAGAATTGTACAAAGTGGTCTATGCAAGTGAGGTGTGAGGGCTCCAACTCCTACTGAGACGCTCAGAGGGGCCAGGACGGGCAGAGCCCACCCCAGCCCTTCCAGGGCCAAGAGCGCTAAGGAACACTCACAGCCCCTGCAGCGAGGCAGCCACGAAGCCCCTATGGTTAGCTGCCCCAGCGCCCGGGGGTCTCCCTGCAGGGGCGCGGCCCAGTGCAGACCTCACGCCAGCTCACCCTTCGCAGGGTCCTTCTGAGAAGGGCACCAAGGGCTACAGGGCATGCATCCAGAGCCGGTCAGCCGTGGGCAGGCACTGGGGCGCCTGGACCCCGGCTCCCGTCCAGGACCTCGGCGTAGATTAGCGAGGCAGGCAGGACGCGGTTGGGCACCCCTCGCAGCCATCGAGGTGAGGAAGTGACAGCCGTGGCCCTGGGGATGTGGATGGGGAGGCGACTGCGTCTGCTGGAGCCCTCCAGACCTGCCCCGTGGCCTCAGAGATAGTGCCCTCCCGCGGTCCCCACCTGCCCAGCCACACACCGACAGGGGCAGCTGGGCTGCAGCGAACACAGCGGACAGAGCAAAGCGCCGTCAGTGTCCAGCCCAGCCCGGCGTGAACCCTGAGGTTTGTACCTGAAGACCCCAAATCTCTCTCCTCTCCTCCTGCCCCCTGGAGGTCTGAACAGAAGGGTCTCCCATCTCGGGGCCGTGAAATCAGAGCCGTGTGTGACCTCGTACGCATGGTCCAGCCACAGGCATGCCCAGAGGGCCGGGCTGCCCCGTAACCCTCGTGAATTAAACGCACGTCCCCCCGCACCGCCCACACAGGGCTGTCCGCCAACTCACAGTGTTACAGGCAGCCCCCCCATCTGAGAAAGAGAAACTTCCCCAGATGCTCTGTAGGGGCTGCTTTTCCTTACGCAGCGCTTTGTGGGAAAGATTTAAATGAGGTTTGGGGGTATAGATTCTAACTGGTTGCAAGATAATTGCTAACAATGAAAACGGCCAGCTTAGCCATCAAGTCCTCAAACTCTAATTTTATGCGAGAATTAGTTCACAAATATATAATTCCAGCTAGCACGTGCTGTCACTGTTACGTCTGAGCGATTCAGACTTTCACCCCCAAAGTTATTTTAAATCTGTCTCCAGAGAACATTTAATACGAGTTTGGCAAATGACGTTTCTGCGGACTCCTCTGGAGGTGTCATCTGTCAAGTTGCCATCTGAAATGTAATTTGTGTCATTTGCTGGGGTTCATTATTGCAGATATTAGCAATCAATATTTCTTCCCTCAAACAGGACAGCAGCTGGCCCTTAGGAACCCATGGAAAGATTTCTCCTCCGTTTTAAACTGTCGTAGAGGGTCTTCCAAGTGGGCACTGATCACCCCTCGGGGACAGGGACAGTCAGCTCCCAGTACCTGGAGTCTGAGGATGAGACAGAGACAGAAAGATAGAGAAAGACAGAGAATAAGAGACAGACCCTCAGAAACAGAGACGGAGAGATGGAGCTGCGCTGGCAGGAGCCCAGGGAGCCGAACAGGGTCCCCACCTCGCAGGTCGCCACCACGCAGGGTCCCCATCACACAGGGTCCCCACCACACAGGGTCCCCACCATGCACAGTCCCCACCATGCAGGCCCACAGTGGGAGGAGGACACGCTGAGGAGGGAAGGCCCCCAAGGCTGTAAAGGTGAAGCTGAGTTCAGACCACACAGGTCCCAGCGGATGCCCCATCTCGAAGGTTGTAAAGGCCGGTGCCCATCAGTGGTGCTCACTAGGTCTGCAGGCACTGGGTAGCATGAGCCACTTGAAGCTGGGAAGCTTTGGGACCCATCTGTTACGCAGCAGAGGCTAACTGATACAAGGGACGTGGGACTTGGGTGGGTGTGCTTCCTTTTTTACTCAGTAGATAAGAAGACTGTTCAGACTATATG EMBV3_31604 CATGATGTACACAGTGTCAAACTCCGCCAGGAAAACATTGAACTGGGAGAGAAGCTTAAG Gene BVT0102_113548 + 1 EMBV3_34421 GK000009.2:11696165-11751986 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236609 TCONS_00236608 1 XLOC_144529 Coding TCONS_00236609 XLOC_144529 Coding Coding - 9:11718867-11719603 - TSS177091 268 1 TCONS_00236609_1 73 2 0.638095238095238 0 0 0 0 0 0 0 0 0 0.000199583568164788 0.000170834813588045 1.33420595628506e-05 0 0 0 0.0191544595421804 0.00308089038234013 0.0118234650573058 0 0 0 0.00236186799576661 0.00217757818953527 0.00173387759162238 0 0 0 0.000680963982481882 0.00036228429482426 0.000358939829313005 XM_865719.4 TXLNG PREDICTED: Bos taurus taxilin gamma (TXLNG), transcript variant 3, 1e-49 199 82.32 0.735074626865672 NM_001168683.1 TXLNG Homo sapiens taxilin gamma (TXLNG), transcript variant 2, mRNA. 1e-56 223 84.85 0.735074626865672 TCONS_00236609_1 sp|Q9NUQ3|TXLNG_HUMAN TXLNG_HUMAN Gamma-taxilin; 6e-24 95.5 90.32 0.835616438356164 1 noncoding GTTTTACACTATTAACAAAAATTATTTTGAACAATAAGGAAGAAAATATGCAGCAGGCAAGAGAAGAAGAAGAAAGACGTAAAGAAGCAACTGCACATTTCCAGTTTACTTTGAATGAAATACAGACACAACTGAAACAACATGATGTACACAGTGTCAAACTCCGCCAGGAAAACATTGAACTGGGAGAGAAACTTAAGAAGCTTATTGAACAGTATGCATTGAGGGAAGAGGAGAAGAAAATAGAACTATCACCCACTGTTGGCAC TCONS_00234690 TCONS_00234691 r 3' 31536 TCONS_00234690 TCONS_00234691 r 3' 31570 EMBV3_11205 TTCCAGATCCTGGCTGAACGGCAGGACATGCCCAGCCTCGCAGGTGTCGACAGAAGCCAT Variant GeneID:616110|ZNF511:XM_002698473:515_cdna 450^574 2 EMBV3_34189 GeneID:616110 26 GENE ZNF511 NULL zinc finger protein 511 EMBV3_06286 ATGTCCCTGTTATACTGTTGAAGTTAAAAGCCATTGCTGTGTGGGCTTGGAACCAGGAGA Variant GeneID:534598|IQCB1:NM_001046381:77_cdna 287^449 1 EMBV3_08427 GeneID:534598 1 GENE IQCB1 MGC137218 IQ motif containing B1 EMBV3_38911 CCTACATCTTCATTCTCTCCAGCATCCTCCAAATCCACTCCATTGAGGGCAGGTCCAAAG Gene GeneID:509323|LOC509323:XM_002699163:46_cdna Constitutive 0 NULL GeneID:509323 29 GENE LOC509323 NULL similar to Olfactory receptor 8G2 (Olfactory receptor OR11-297) (Olfactory receptor TPCR120) EMBV3_21361 AGCCCACCCCTTTTGAGTGTCTTAGTGGACAAAGCTCCCTCCTTCGCCTCTGAAAGGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06979 GAGCCAAAGGCAGGCTTTCCTCTGACAAGATGCTGGTGCAGACTATTTCTGAAGATTTCT Gene BVT0102_218900 + 0 NULL GK000004.2:95537402-95807760 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28207 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24573 ATAGCATCAAGGAGGCCTTCTCCTTCCAGCCCAAGCTGCGCTCGCCCAGGCGCCTCAACA Gene GeneID:506083|RPS6KB2:XM_002699365:278_cdna Constitutive 1 NULL GeneID:506083 29 GENE RPS6KB2 NULL ribosomal protein S6 kinase, 70kDa, polypeptide 2 EMBV3_32688 AGTGGGGAGGGGTGCAGCAGTGAACACAAGAAAACTAGGCAAGAGATAAAGGTAGCTTGG Gene BVT0102_026262 + 1 EMBV3_10579 GK000015.2:45799992-45836410 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059285 TCONS_00059286 1 XLOC_036301 NonCoding TCONS_00059286 XLOC_036301 NonCoding NonCoding - 15:45805716-45816867 - TSS44486 2311 1 TCONS_00059286_1 119 0.602769363911727 2 0.792914798206278 0.000678326146792165 0 8.74626671697676e-05 0 9.10766662066991e-35 5.54439989925408e-06 1.06990441566388e-05 0.000260063170013285 4.32610010995686e-05 3.82845218910556e-05 3.3820252179538e-06 0 2.6259015314258e-06 0.000112879134309047 6.56500728992932e-05 2.59750495923034e-05 7.40096862925864e-05 8.5788640848345e-05 7.66627654939331e-05 0.000191057597095216 0.00060331669509287 5.59867737256045e-05 4.45114818285209e-05 0.000234230744211854 0.000741890671553432 6.66878106001092e-05 0.000114428430501927 0 0 0.000484928650466352 XR_230111.1 LOC101902732 PREDICTED: Bos taurus uncharacterized LOC101902732 (LOC101902732), 1e-36 159 71.52 0.131977498918217 0 noncoding 1 1 1 1 0.0779382660600172 0.610809401894456 -0.0842446100951683 0.591492845981209 ATGGCAGCAAGACTGGAGGGACAGCTGATTCATCTTCCAGGGTGGGAATTCAGAAGTCACCAGATAATGACAACTGAAAAAAGAATAAAGTAGCAGAACAAGCATTTTTTCTAGTATCATGGATAAAAATACTAAGAGTTTGAAGTGGCTCCATCTCAGGAAGAGCAATAGGGGTGTGCAGATGGGGAGATGGCCACTTTAACAAATCGTATACAATTATTTGAGCCTTCACATTGCGCATATATATAGTAGTGATAAAAAAACCAATCAGAAGGACTACAAGAGAGAACGTGTGTGGTGTGCCTGGCACAGAGCCGAGATTTGATTGATTACTGGGCACTCATTTCTCCTTGTAGCTGCTGTATATCAGGCAAGTGTCTGTAGCTGCCTGCTGAGAGTTTATCCAACATTCTCTCAGTTAATCCCCACGTGCCACTTAGGAATTATTCTCCCCCTTTACAGACAGATAAAGCAAAGTGTCTGAGGATTCGCCCCATTTTTCCTCCCTTCCTTCCACTTTTCCTTTGAGGCAGGAACCCACCTAGTAGAGGGCTTTGAGCACAGGAGGGTCTAACTTACCTTTTAAAAGGATTATTTTGGCTGCTGCTTGAACTGGGGGTAGCGGGGTGAAGAAGTGGGGAGGGGTGCAGCAGTGAACACAAGAAAACTAGGCAAGAGATAAAGGTAGCTTGGACCAGAATGCTTGTGGTAGATGTTCTGATCCTTAATATATGTTGAGGACAAAGCTTGTAAGCTCTACTGATAGGCTGGGTGTGGGCAGGAGAAAGTGAAACCCCAGGCTTTTGCCCTGAGCTTCTGGGAGAGTGGGGAGAACTGTGGGAGCAACAATGCTGGAGAGGGTGGGGTGGGAAGGGTGTGAAATTAGGAGGTTGGTTTTGGAAATATTCAGTTTAAGATGCCCAGGGACACCTAGAGAGAGATGCTGAGTACAGTAGCCATTTGGAAATTCAAGATATTTGGAGAAATCTAGACTGGAGATATTCTGGGAACCGTTTGCATAAAGGCAGTATTTGAACAACCACAGGAAGTAACTTAAAAAATAGTGTAAGACAAAAAAAAAAAAAGAGGCTCCAGGACTCTTTGAAACACTCCAAATGTGCTGTCAGGGAGGAGAATCAATGAAAGGGACGGAGGAACAGCCAGGAGAACTGAGACAGGGGTGCAGCATAAACCATGTGAAAAGTTAGCAGCCGAGGACAAAACCAGGGGTGCCACGTGCTGCTGAGTCAGCCCAGAGGCCATCTTCTCTCCAGCGACTCGCTGGGGGTGACCTCACCTGCTCCACAACCTCACCTGCCCCGGCCTTACCACACCCTGGATGGCAAGAGCCTGACTGACTGCCCTGCCTCCAGACAGCCTCTCCACTCGCCCTGCACTGCAGGCTCACTGACTCAACGCTCCTCAAACCTTCGTGTTAGAAGCACCTGGAGAGTTAATGGCGCAAGAGGCTCAGGTGATCCTGAGACTGACCAAAGTTGATGGAATGCAAACACAGCTCCCAACCGGGCACTCAACTGCTTGTGGAGAGTTTCAGGGTCCCACCACCAGCCAGGGTAGAATTATGATTCTTACCAAATTGATTCAACCTACTCAGCTGCAGCTCTACGTGTCCATCATACACCATGGCAAACCTCAGCCCCATCCCAACCAATGTCTTACCATTAGCAGGCAGATTCTAAGCATTAACTGTCTGAATCCAGGAGCTTTCCAGCTTTTATGCCCATGCTGGTTAACTTTCCATCTTCTCTTTGAGCCAACTCTTCCAGAAAACCCTGTGTACAGTCAGGTCACTTGAGATGGCTGTTCTCTTGCTCTCTGTACATCCTCTGCCCAACCAGTGCTTGCTTCACCCTTATCTTAAGTACATGACTGACCTTCCTGCGTACTTGCCCCAGGTAATGATAGTGTATCAAAGGGCTGGTGAGGGGCGTGTCCCTCTAGTGGTTTCCCGGTAACTAATGAGCCCACCTGACATCAATTCCCCCTATAATTAGTAATCTCTTTCTCCCGGGAGCAAAGACTGCCACCATGTCCTGCCTGCTGTCTGCTCTACAGGGTAGGGAGTCGCTCCAGGACCTTGCTTCAGACATGGCTGCCTTGCCAGAGGGAAGTGGTCCAGGGAGATCCCACATGCTGCGGAGCAACTAAGCCCGTGTGCCACGGCTACTGAAACCTGTATGCCCTAGAGCCTGCACTCGCAATGAAGAGCCGCTCCCACCCTGCCCCACACAGCAACAAAGACCCAGCACAGCCAAAAATGAACAAATAAACTAACATTAAAAAAAAAAAA TCONS_00061437 r 5' 0 TCONS_00061437 r 5' 0 EMBV3_22693 CACCTGGGCTTACGTCCAGCAGCTGAAGGTCATCGACAACCAGCGGGAACTGTCCCGCCT Gene GeneID:535383|RAPGEF3:NM_001080302:84_cdna Constitutive 0 NULL GeneID:535383 5 GENE RAPGEF3 NULL Rap guanine nucleotide exchange factor (GEF) 3 EMBV3_29377 AGTTATCCACCATTTAGTGAGAGGTAGCTGGCCCAAGAAAAGACAATAAATTAGGGTGTG Gene BVT0101_031602 + 0 NULL GK000005.2:5816004-5823293 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193896 TCONS_00193890 TCONS_00193892 TCONS_00193891 TCONS_00193894 1 XLOC_117617 Coding TCONS_00193890 XLOC_117617 Coding Coding OSBPL8 5:5820130-5846531 j TSS144810 5416 1 TCONS_00193890_2 444 13 0.795340909090909 5.82000602121199e-12 0.000752763281599511 0.000117701358671642 0.000721847157031328 0.00119669185684446 0.000433516835343397 0.000605294968756498 0.000599725177790417 0.00127014951269157 1.10561324362457e-06 0.000226652805421259 0.000240210821910994 4.25937875406108e-05 0.000705390655223221 0.000438042037414716 0.00388619348119752 0.008893718340485 0.00283441139105939 0.00180201045263161 0.000496766396186641 5.62145410962612e-14 0.00178428218633899 0.00355796461865513 0.00447795926942237 1.69159247940907e-09 0.00106049289062408 0.0008978546855882 0.000264967945722044 0.000286886337537728 0.000285637711818993 XM_005206021.1 OSBPL8 PREDICTED: Bos taurus oxysterol binding protein-like 8 (OSBPL8), 0.0 9710 100.00 0.99390694239291 NM_020841.4 OSBPL8 Homo sapiens oxysterol binding protein-like 8 (OSBPL8), transcript 0.0 3074 86.23 0.475073855243722 TCONS_00193890_2 sp|Q9BZF1|OSBL8_HUMAN OSBL8_HUMAN Oxysterol-binding protein-related protein 8; 0.0 908 97.51 0.990990990990991 1 coding 0 0 0 0 -0.0579765211688557 0.699476258161667 -0.00766455675692732 0.908184784956312 TGCTTCATCATTGCAAATGCTAGGGATCATGCAGGCTGCTCTTGAAGAAAATCCTTATTTCCGTTTGAAGAAAGTAGTGAAATGGTATTTGTCAGGATTCTATAAAAAGCCAAAGGGACTGAAGAAACCTTATAATCCTATACTTGGTGAGACTTTCCGTTGTTTGTGGATTCATCCCAGAACAAACAGCAAAACTTTTTATATTGCTGAACAGGTGTCTCATCATCCACCAATATCTGCCTTTTATGTCAGTAACCGAAAAGATGGATTTTGCCTTAGTGGTAGTATCCTGGCCAAGTCCAAGTTCTACGGAAACTCATTATCTGCAATATTAGAAGGAGAGGCACGGTTAACTTTCTTGAATAGAGGTGAAGATTATGTAATGACAATGCCATATGCTCATTGTAAAGGAATTCTTTATGGCACAATGACACTGGAGCTTGGTGGAACAGTCAATATTACATGTCAAAAAACTGGATACAGTGCAATACTTGAATTCAAACTAAAGCCATTTCTAGGTAGTAGTGACTGTGTTAATCAAATATCAGGTAAACTAAAATTGGGAAAAGAAGTACTAGCTACTTTGGAAGGACATTGGGATAGTGAAGTTTTTATTACTGACAAAAAGACTGATAATTCAGAGGTTTTCTGGAATCCAACACCAGACATTAAGCAGTGGAGATTAATAAGGCACACTGTAAAATTTGAAGAGCAGGGAGATTTTGAATCAGAGAAACTCTGGCAGCGGGTAACTCGAGCCATAAATGCCAAAGACCAAACAGAAGCTACTCAAGAAAAGTATGTTTTAGAAGAAGCTCAAAGACAAGCTGCCAGAGAGCGGAAAACAAAAAATGAAGAGTGGACTTGCAAGTTATTTGAACTTGACTCACTTACAGGAGAATGGCATTACAAGTTTGCAGATACTCGACCATGGGACCCACTTAATGATATGATACAATACGAAAAAGATGGTGTTATCCAGACCAAAGTGAAACATCGCACTCCAATGGTTAGTGTCCCAAAAATGAAGCATAAGCCTACCAGGCAACAGAAGAAGGTGGCAAAAGGCTATTCCTCCCCAGAACCTGACATCCAGGACTCGTCTGGAAGTGAAGCTCAATCAGTAAAACCAAGTGCAAGAAGAAAGAAAGGGATAGAACTGGGAGACATTCAAACTTCAATTGAATCTATTAAACAAACACAGGAAGAAATTAAAAGAAATATTATGGCTCTTCGAAATCATTTAATTTCAAGCACACCTGCCACGGATTATTTTCTTCAACAAAAAGACTACATCATCATTTTTCTCCTGATTTTGCTTCAAGTCATAATAAACTTCATGTTTAAGTAGAAGTCCTTTACAATTGAGTTAATGAACTGGAATGATCAGATTTGGCCTGGGACCAATGTTGAAGTTGGTTTGGTCTTTATTAAAACATCACAATATTTATAAAACTGAAAACCTTAGAAATAAATGTAGAAGTGTTGATTTTTCATACCTTTTATCCTTAACCTGAAACAAGAGCTATTCTATTTGATTATTAAAGTGAACTATGTGTTAAGTGCCAGAATGTTTCTAGCTTTTGTCAGAATGTGTCTACATGTGAGTATAATAAATCCACATGTATACACAATTGTGTCTTATATATACCTTAACAGTAATCTTTGTAGTCTATGGTATGTTCATGTAATGAAATATATAGCATTAATGTCAGTCATAACAAAAATACTATCGATCTTATATATGTAACAATCTATTTTCTTCATAAAACAGGCACAAAACTTTTATCAGTAAGGAGTTACAGAATGGGAAATAATGGGATACTAGGCATAAATAGTTCAACACACTGTACTGTTAAAAAAAGATCATTTCCAAAGCATTCAGCTCGACTGTCTTCTTACAGAAAACAAACAAAATGTGTGGTCAAATTGAGACAAAGTGGCAAATTGCTTTTTTCAAAAGTTTACACAAGATTTTTTTAATCCCTAGAATTTAATATTTATAGATACAAGTATAAATATGTGTATATCAACAGCAGAAAACTGGTATGCAGCTACTTGGATCTATTGATTCTATCTTTCTTATCGTACGTATATAATACCCACTTAAGCACTTGCTGGAAAAAAGTGTGGTCAAACTTGATTGCTGTCCTTTTTTATTTTTTTAAACTCAGTTGGTCCAATAACATAGGCTAAATTCTAGAGATGTTTGTAGGGCATATAAAATGCTGATAATCGTGATTTTTCATTATGAAAACCTTTCTTTAGCTTTCATTTAGATTCTGGTGTGTTCAGTGAAACAGTAGAATAGAAAATATATATACATATATCTCCCATATTTTACTTCAAAAGCCAAATAAGAGAAGAGTGATAAGAAAAGACACTTAGTGTGGTGGTAATTATGCATTTTAAAATTGGTTTCTTTAAAATGTGCAATATGTTGAGCATCTAAGAAGAGCATCAAGTTCCGAAGTTTAATTCTCTGTTCTCTGCTTTCAGTAACTGCAGTCTGTGGCAAAACCACAGTTCCTCAAGGTTCCTTTTGTTCAGGCTCAGGCAAACATTTTCCCTAAATTTTTTATCAGTTTAATATTTTTACTTTATGTATCTTAGAATTCCAAAAGTAGATTTTGAAATGAAAATGAAGGTCAGAGAGGAAATAATTGCTCTGGCTACATTTGCCCTTGACTAAGAAGAGACTGTGAGATACTAGTGAAGTTATAGTCAATGTTTATGCCATGCTAAGCATACAATAAAGGAAAGATTACTAAATTATTAAAAACTGAAAATGATAAGAAGAGCCTGCTTTGTTCCTCCTAATCAATACAGTGATCTTTAGTCTCCTTAGGTTTTATGAGGAGCCATTTCTCATGTATTTTTGGCAAAACAATAATTGTGAAAATGTTTTTTAAATAGATTATACGTAAATAAGATATACCTATACCCAATATAAGCATAGGTATGACTACACTAAACAGGTGGGTTTTTTGTTTGTACTTCATACTTGTTGATATCATTTTTGTACTCACTCTCTGTTACCAATATTATGCTCAACTGCCTATTCATTAATATATATTTTGTAAATATTGTACAACTCGATCCTTTTTTATGGCTTAAATTAGAATTAATTTATATAAGTTGATTGGCTGATCACAATAATAATTTCATCTTTAAACCCTGAAAACTTAATGTTTCTTTGTTGGTAAACTCCCTTTTGGGGCTTTAGGCTTATCTACTTGTATGCTACTTTCATTTGGTCTTAGTGTTTTATTTGTATGGTTATCCTCTAAGACTAGAGAGGGAGTTGTTTTCTTTATTTTTAAAACTTTTCTTGTTAGGGCAAATGTTATGGGTTCTTATTATCCCAGGAGTCAAAAACTATTTCATGAGAAAGAGCAGGGTTACTCATGCTGTTTCTTATACACTAAAAGCATATGTCTAATCTAATAGTCTTACGCTTTTAGTTATATGAGTTCCTTTCTGTGAACTGAATACAAAACTCAGGAATTGGTGGCTTAGTTTTAGATCAGTTCTTATACTAGGCTTAGTATGTGAATGCTTTAAAATACATAATGAACTTTGTATTTAGCCATGTATGTAATTGACTTTGAATGTTCTCTACCTGAGATTAATCTTCCTTCACACATGGACTCATAAAAATTATGATTTACAGTTCCCAGTTATCTGAGAGTCTCATGATGGTTTCTAGGATTTAAGACCTATAACCAGTTTTTTTTTCTTTTTTTCATTTAATCAAAAATTTTATTTTTTCACTGAAAAATTTAAATACGTAATAGTTATTGACATGTGCATTTTTGTTTTAGTTATTAAATATACTATGCCTTCAGTTATCCACCATTTAGTGAGAGGTAGCTGGCCCAAGAAAAGACAATAAATTAGGGTGTGTGATATAAGTAAGTTTCAGCAGTAGATACTTCATTTGTATTTCATATCACTACTTTTTTTGTATTACTTATAAAGGTACAGTGTAATTTTTGTTACCATTCCATTGAAAAAGTTGGCCTTGTAAAATACAACTCTCATTTAGTATTCATGCTTTTGTGCCTTTAAGAAAATAATTTTTTTGTCATTTTTGTGTTACAGAACTGTAATATGATTCAAAGTGTTTATAGGCTTAATTGTCATAAAAGGGTCATTTCTCTGTGTCACTTTATTTCCTTTTATATAGCTATAGTATGTTTAAACAGTAATGCCATACTTTTATAAGAGTTTGTCCATTTACCTATCTCAAATATATTCTTCACTTTCAGACATCACTGAACTAGACTTGTCCGATTATTCTGAGTATTGTTAAACAGTGCCTTTTCGATGGAATTCACACTGTTTTAGGATGTCAACTTGTGCCATATGTATACAAAATTATGTGGAGAAGGCAGTTTTAACTTTTTGAAGAATATCTTGGTGAAATATTTAAGAAAACAAATGTGTAAAATTCCATTTTTTCCAGTGTTTCACATTTCCAGTGAACAGTGAATATATTTGGGGGTTTTTGTTTGACATACAGTGATAATGACATTTGATGAGCCATGCATGATGCTGCAGATGATTTTGAATTATGTTAAATGCACAGAAATATTAAAATCAGCATTTATACCAAATTTTCCAATTTGAACCATAGCTGAGAGGGGAGGAATCCCACACAGATCACTAAGTTTACATTTGAACTTCTATCTTATTTGACTACGTGGAAAAAGATTCTTTAACCTGTACCCTGCCACTATTATGTAATTTGGTTTTATTTTGTGTACCTATAGTGTGAATTTAGTATATTAAATTTACTTTTTGTCACTCTTAACATGCTGTTTGTTTTGTTACAGTTTTAATTGAAGATGGACTGTTAAAATTGAATAGGACCAGTGTCTCCTTAATATGATTAACATATTTAGAAGAGCCACAAGAAACCCATGACAAAATGAATGTGAATATACTTTATAAAATATTTAGAAAATTTTCTTTCTGAATTTATCATGAAAAATTATTTGAGAATTACAATATTAAATTTAAAGAAAAAATGCCATGAAACATTTGAACTGATGAGCCACACAACTTCAGTTGAAATTTTTTACTTTTTAGCATGTTAACTATACATCTAAGTTAAATATCCTGTTTAATGATCATTTATAAATTCAAACACTGGTCAGTTTTGTAAAACAGAATAAAAGTATGTTATTTGCAGTGTAAGTACAGCACACTGTCAAGTTATTTTCCTTAAGGTGCATAGTAAATGTACAGATAGTCATAGGCAACTGTTTTGTAATGTATTACATTTCTAATCTGTTACTCCTAACCTACTATAAATGTTTGCAGAGACAAAAGAATTGAATTTTTCTAATGATCTGTAAAATGATGCTAACTTCAACTAGGCATTCTAAATAAAGTTTTTAAAAAGAGCAAA EMBV3_40981 CCTTGAACCTGACCAGTGAGCTTTTGCAGAGTCTGTCTGTTACTTTTGATGGAAAAAGAG Variant GeneID:512324|SETD3:XM_002696833:644_cdna 385^477 1 EMBV3_38209 GeneID:512324 21 GENE SETD3 NULL SET domain containing 3 EMBV3_41370 GCATGCAGGAGCCCTTGTTTGTGGAGTTTGCTGACTGCTGCTTGAGTATCGTGGAGCCGT Gene GeneID:504662|ZNHIT3:NM_001045895:203_cdna Constitutive 2 NULL GeneID:504662 19 GENE ZNHIT3 MGC137225 zinc finger, HIT type 3 EMBV3_12334 CAAAACTAAGTCTCATAGACGCAGAGAGCAGAGAAGTAGGTGGTGGTTAAAAGGGGCGGG Gene GeneID:513309|GFM1:XM_002684956:221_cdna UTR3_Alt 2 NULL GeneID:513309 1 GENE GFM1 NULL G elongation factor, mitochondrial 1 EMBV3_18376 ATTCTGGAATCCCCTTCTCTGGAGCAGAATGTAGATCTGGTGCCTGCGGACTTGGTCCTG Gene GeneID:100299732|LOC100299732:XM_002696130:250_cdna Constitutive 0 NULL GeneID:100299732 19 GENE LOC100299732 NULL hypothetical protein LOC100299732 EMBV3_12768 TATACAACTTCGTGATCTTTAATAATCGGGACTACTGGCTTCAGATGGCCGTGGGGGCGG Gene GeneID:531274|RPP40:NM_001105402:223_cdna Constitutive 0 NULL GeneID:531274 23 GENE RPP40 MGC157334 ribonuclease P/MRP 40kDa subunit EMBV3_39612 TCTTTGCATTGGCTTTGTCATTCTGGAGTCTGGAAATCCAAGATCTAGGTGTCAGCAGGG Gene BVT0102_094946 + 0 NULL GK000017.2:14753592-14889391 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074923 TCONS_00074918 TCONS_00074921 TCONS_00074929 TCONS_00074926 TCONS_00074922 1 XLOC_046453 Coding TCONS_00074926 XLOC_046453 Coding Coding - 17:14808719-14882478 - TSS56641 3633 1 TCONS_00074926_8 341 0.838425543627856 5 0.950812115295968 0.000125527009829293 0.000492934442838957 0.000233267506308726 1.79283256264776e-12 3.53138622660806e-18 8.94469175656832e-57 4.04026931692783e-05 1.59189488171881e-09 6.95163959985599e-09 4.86728353084664e-39 0 0 2.98477088972588e-191 2.58246879385271e-05 8.85861102084124e-43 0 0 0 3.01947939298544e-10 8.11312931247188e-14 0.000273432905160499 0 0 3.97561744537037e-11 8.21762111972142e-05 0.00010355741404922 6.36769378289522e-11 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1411 88.86 0.296724470134875 TCONS_00074926_8 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-11 67.0 26.05 0.671554252199413 1 coding 1 0 1 1 0.00318415271386634 0.984425179089687 0.0324588972497399 0.653418889382155 GTAGAACATGCCTGAGCGATTAATACTCTCAGAGTCCCCTTTGAGAGGCACAGCTGGACGGGGCTTTGCCTGCCGGGTTCATGGAGAAGGACGGATCTGAAGTCAGAAGCCCTGCAGCTCACAGAGCATGTGGGCCCGAATGACTCTGTCCTGTTGGACCTGCAGCAACGCACTCCCTAACCCAAGGAATCCTTCTTGTATCCAGAGGCATTCCCCCCAGAGCAGAAGGCTGCTCACAGCCTGGGTGGCCAGCGGAGCTTCCTACGGGAGAGAGGCTCTAAGAGCAAGGGAGTGGTCAGGGCAGGAGGGCAGAGATGAGGCCCTGTGAGGACACAGTGGCTGTCTACAAGCCAGGAAGAAAGATCTTACCAGAAATCAACCCTGCTGACACCTAGATCTTGGATTTCCAGACTCCAGAATGACAAAGCCAATGCAAAGAAATAGAGGAAAACAATAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAAGGAACCTTTCATGCAAAGATGGGCTCAATAAAGGACAGAAATGATATGGACCTAACATAAGCAGAAGATACTAAGAAGAGGTGGCAAGAATACAGAGAAGAACTATACAAAAAAGATCTTCACGACCCAGATAATCATGATGGTGTGATCACTCACTTAGAGCCAGACATCCTGGAATGTGAAGTCAAGTGGGCCTTAGGAAGCATCACTACGAACAAACCTAGTGGACGTGATGGAATTCCAGTTGAGCTCTTTCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGCAGTGGTCACAGGACTGGAAAAGGTTAGTGTTCATTCCAATCCCAAAGAAAAGCAATGCCAAAGAATGTTCAAACTACCGCACAATTGCACTCATCTCACATGCTAGCAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAGTACGTGAACTGTGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCACTAGATTATCGAAAAAGCAGGAGAGTTCCAGAAAAACATCTACTTCTGCTTTATTGGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGAGGGAGGAGCCCAGTAGGCTGTAGTCCGTGGGGTTGCTAAGAGTCGGACATGACTGAGCGACTTCCCTTTCACTTTTCACTTTCATGCATCGGAGAAGGAAATGGCAACCCGCTCCGGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGCCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCTGCTTTATTGACAATGCCAAAGCCTTTGACTGTGTGGATCACAATAAACTGTGGAAAGTTCTGAAACAGATGGGAATACCAGACCACCTGACCTGCCTCTTAAGAAACCTGTATGCATGTCAGGAAGCAACAGTTAGAATTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTACATGCAGAGTACATCATAAGAAATGCTGGGCTAGAAGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTAAGAAGCCTCTCGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAACATTCTCAAAACGAAGATCATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGACAAGCTTTATTTTTTTGGGCTCCAAGATCACTGCAGACGGTGACTGCAGCCATGAAATTAAAAAATGCTTGCTCCTTGGAAGAAAAGCTTTGACCAACTTAGACAACATGTTAAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCATCTAGTCAAAGCTATGGTTTTTCCAGTGGTCCTGTATGGATGTGAGAGTTGGATTATAAAGAAAGCTGAGTGCCAAAGAATTGATTTTGAACTGTGGTGTTGGAGAAGACTCTTAAGAGTCCCTTGGACTGAAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCACTGGAAGGACTGATGCTGAAGCTGAAACTCCAATAGTTTGGCCACCTGATGCAAAGAACTGACTCATTTGAAAAGACCCTGGTGCTGGGAAAGATTGAAGGCAGGAGGCGAAGGGGACGACAGAGGATGAAATAGTTGGATGGAATCACGGACTCAGTGGACACGAGTTTGAGTAAACTCTGGGAGTTGGCGATAGGGAGGCCTGGCATGCTGCAGTCCATGAGGTTGCAAAGAGTTGGACATGACTGAGTGACTGAACTGATAAAAGACATACAGAAAAGCACAAAATTATAAGTATACAGTAGATATGTTATCATAAAGTGAACAAAGCTGATAAATGAGTAATAGGTAAAACAGAATTATACCATGGAAGTCCCCATTCATGATTCTCTGTGATCAGTTCTCCCTTTCTCCCACCGTAACAGCCATACAAGTGTTTGCTTGGCCATGCAGAGACAATGGGACTGACTCAGATCTCTTGTTGTTTAGTTGCTAAGTCATCTCTGATTCTTTGAAACCCCAAGGACCGTAGCCTGCCAGGCTCCTCTGTTCATTGGGTGCTAGTGATAAAGAATCTGCCTGCCAGTGCAGGAGAACCAGAGACATGGGTTTGATTCTTGTGTTGGGAAGATCCCCTGGAGAAGGGAATTGCTACCCACTCCAGTATTCTTGCCTGGAAAATGCAATGGACAGGACAAACTGGTGGGCTACAGTCCAGAAGCCTGACCACACACGGTGGGGGCTGGTGGTGGTGTAGGAAACATCCATACTTCTTACATCCACAGACTGCCTGTTTTACAGAAATAATTTGCTCTCCTTAAATTATGCTTGTGGAAATCATCCATGTTGTAATGTTAATTGGAGTTCATTTATTTTCACTGCTGTACAGGAATCTAATATATGATATACCACAGCTGATCTATTCTACTCTTCATAAACACTTAGATTATTTCAAGTTTTATGCTGTTATGAATTTTCTAGGCAATAATAATGGAGTGGATTGCCATTTCCTTCTCCAGAGGATCTTCCCAACCCAGGGATTGAACCCGGGTCTCCCGCATTGTAGACAGATGCTTTACCGTCTGGGCCACCAGGGAAGTCCTGAATAACACATAAGATCTTTGCAAATGTGTATTGTGAACACATTTTTGTAGCCGTATGCACAGGTCCAGTTTTCAAAGATAATGCCGGTTTTCCGAAATGGTTTTATCAATCCACACTCCTGTTAAGCGTGAAATTTTACATTCTACATTCTCATCAGTATTTTTCAATCTGTCAAAGTTTATTCATTTTATGAATAATAAATGGTGTACCATTGTGCTTTCATTTACATTTTCTGATGATTAATAAGGTGTCTTTCTGTATGTTTATTAGAAACTTGTTTTCTTTTGAAGTGCCTGCTTCTCTCTTTCCCATTTTCTATGAATCATCTTCT TCONS_00076738 r 3' 4973 TCONS_00076732 r 5' 54701 EMBV3_11727 ACATCACCAAAGGCCCCCCAGCAGATCCGGTCACACTTCTCTGCTTTAAGCCTTAGTCAA Gene GeneID:508641|RANBP3:NM_001075369:39_cdna Constitutive 1 NULL GeneID:508641 7 GENE RANBP3 NULL RAN binding protein 3 EMBV3_32611 AAAACATGGCTTCTACTCCTCTTACCCCCAGGAGAGCAAATCCCTGTGGACTGTCTCTTC Gene BVT0101_079861 + 0 NULL GK000018.2:35310553-35327416 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10838 CGGGCATCATTAAGCAGGGGACTAATTGTTTAGAATCCCAGGGCCAGGACACAGCTGGTA Gene GeneID:526331|GALNTL1:NM_001101127:133_cdna UTR3_Alt 2 NULL GeneID:526331 10 GENE GALNTL1 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 EMBV3_20306 GGAGGGCAGGGGAGATGCCTGTGGTTTTTGACACAGTTGTTAATTTCACTGGGATTTTGA Gene GeneID:539636|GLYR1:NM_001040568:252_cdna Constitutive 0 NULL GeneID:539636 25 GENE GLYR1 MGC137845 N-PAC glyoxylate reductase 1 homolog (Arabidopsis) EMBV3_06059 GGACGGGAGAGACTATGGAGCAAATGTTTGACAACCTGAACCTCAGAACTGTGATCCTCC Gene GeneID:782395|LOC782395:XR_084661:71_cdna Constitutive 0 NULL GeneID:782395 27 PSEUDO LOC782395 NULL similar to malignant fibrous histiocytoma amplified sequence 1 EMBV3_10177 CACTTAGTCCAGAAGATAGTACTTTCCCTGTTTTGTAGTTCACACTGGGAAGAGATACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23558 CCCAGACAGATTTCGTCTCCTTTGCTTGCCTTCTGCTGCTTAAGATTGTGGCGAACAAGC Gene BVT0102_095365 - 0 NULL GK000019.2:59071796-59491953 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098052 1 XLOC_058415 Coding TCONS_00098052 XLOC_058415 Coding Coding LOC100336535 19:59488843-59494897 = TSS72520 3420 2 TCONS_00098052_1 229 5 0.435816950272592 7.87737568305158e-05 8.11000849504623e-06 9.22751904858124e-06 7.68902452447494e-06 1.70828300371449e-05 2.82886524044013e-06 3.14126861057374e-05 4.12054607867091e-06 5.30622498564944e-06 6.29939837077575e-06 2.10795273897446e-06 3.45572690664033e-06 7.22007965122301e-06 4.16710334710515e-06 0.000184827025703057 0.0017138719097312 1.53724812339405e-05 8.08705259220527e-05 5.89190602881901e-05 1.83991390289753e-06 4.61616610555263e-06 1.47455005386314e-05 0.000523291966028315 0.000830209541296872 4.0179867718921e-06 1.8540710854285e-05 6.74582123304229e-05 8.14474008753919e-06 2.0018011678603e-05 0.000153177605601143 XM_005221337.1 SOX9 PREDICTED: Bos taurus SRY (sex determining region Y)-box 9 (SOX9), 0.0 1874 99.90 0.304970760233918 NM_000346.3 SOX9 Homo sapiens SRY (sex determining region Y)-box 9 (SOX9), mRNA. 0.0 2035 80.75 0.646783625730994 TCONS_00098052_1 sp|P48436|SOX9_HUMAN SOX9_HUMAN Transcription factor SOX-9; 7e-74 236 98.21 0.48471615720524 1 coding 0 0 0 0 0.0246526538344904 0.827950942159735 0.0138434882113474 0.787094194804335 CGGAGATTGAAACTGACCTGGAACTTCAGTGGCGCCGAGACTTGCCAGTTTCACTCCAGGAACTTTTCTTTGCAGGAGGGAGGAGAGAAGGGGTGCGATCGCCCCCGCTTTCTGCTCTCTCTTCCCCTCCTCCTCCTCTCCAATTCGCCTTCCCCTACTTGGAGCGGGCAGCTGCGGGCTGGCCCCCGCGCGCCTTCCTAAACCCTCGCTCCTGCGGCCGAGTGACGCGCCAGGCTCCCCGGGAGCTGCTCGCCCCGCGCCCGGGCCGCCGAGGGGAGAGGAGCCCGCGCCTCGAGTGCCCGAGCCGCCGCGGCTTCTCGCCTTTCCCGGCCAGCCGCCCCCTGCCCCGGGCCTGCGTATGAATCTCCTGGACCCCTTCATGAAGATGACCGACGAGCAGGAGAAGGGCCTGTCCGCCGCCCCCAGCCCCACCATGTCCGAGGACTCTGCGGGCTCGCCCTGCCCTTCGGGCTCCGGCTCCGACACCGAGAACACGCGGCCCCAGGAGAACACGTTCCCCAAGGGCGAGCCGGACCTGAAGAAGGAGAGCGAGGAGGACAAGTTCCCCGTGTGCATCCGCGAGGCCGTCAGCCAGGTGCTCAAGGGCTACGACTGGACGCTGGTGCCCATGCCGGTGCGCGTCAACGGCTCGAGCAAGAACAAGCCGCACGTCAAGCGGCCCATGAACGCCTATCATGGTGTGGGCGCACGCGGCGCGCAGGAAGCTGGCCGACCAGTACCCGCACCTGCACACTCAGCCCCTCTCTCTTTCTCCCCGCGCCGCCCCCAGACTGCTGAACGAGAGCGAGAAGCGGCCGTTCGTGGAGGAGGCGGAGCGGCTGCGCGTGCAGCACAAGAAGGACCACCCGGACTACAAGTACCAGCCGCGCCGGAGGAAGTCGGTGAAGAACGGCCAGGCCGAGGCCGAGGAGGCCCCGGAACAGACGCACATCTCGCCCAACGCCATCTTCAAGGCGCTGCAGGCCGACTCGCCGCACTCCTCCTCCGGCATGAGCGAGGTGCACTCCCCCGGCGAGCACTCGGGTGAGCCTCCCCCCGCCCCCACGCGCAATGTGGTCTTCCGGACCCTCCGGGGCCTCGGACCCTCCCCTGATAAAAGGGGGCTGCCGAATGTGTACCCGCGGGTTAATCATTCGACGCCTTATCTCGGGCGCAGCGCGCCTACCTTGCGGATGCAGGGAGGGAGGCGGCCCATGTACACGCCCATCGCCGACACCTCGGGGGTGCCCTCCATCCCCCAGACCCACAGCCCGCAGCACTGGGAACAGCCGGTCTACACACAGCTCACCAGACCCTGAGAAGAGCTCGCACGGGGCGGGGGCCCACGATGCTGGCCGTGATGATCGCAGAAGGAACCCAAGAAACAAACGCGCGACCCTTTGGACATTTTTTTTTCCTTCTCTCTCTCTCTCGTTTTTTTTTTTTTATTTTTTTTATTTTTAAGACAACGTTACGCTGAAGGCGACTCGGACGCAGATTCCCAAGACACTAAACGTTGAGCTATCCAGACGCATCACCGCCTTGTCGTTAGACCGGTGGCCAGCCCACTCTTGGCTAGAATGGACCGGCGGAACCGACGCCGAAACTGGACTGGAAACCTTCAAAGCGAGCAACGTGGAGGGCGACGGAGAGTTTCTCATGTGACCCATTTGCTCAGTTCTCTCTGCCTGTTTGGACTTCGTAATTATTTTTAGCAGTAATTAAAGAAAAAGAAAGTCCTCTGTGAGGAATATTCTCTATTTTAAATATTTTTTAGTATGTACTGTGTATGATTCATTACCATTTTGAGGGGATTTATACATATTTTTAGATAAAAAGAATTAAATGCTCTTATTTTTCCAACAGCTAAAAACTACTTTAGTTTGAACAGCGTGCCCTAGCTTTTCTTGCAGCCAGAGTATTTTTGTACAGATTTGCTTTCTCTTACAAACAAACGAACGAAAAAGAAAAAAAAAAAAAAAAGGATGTGTGTTATATTAACCTGCAAAAGCCGCAGATTTGTGTTACTGGGCAGTTTGGGGGGGTGAGCTTTGCTTAACTCCTCAGGCTTTCCAATTCAAGGAGAAGTTGCCTTAGAAAGAAAAATCAAGGCCTTATTTTGCAAAGACAGAAGTAAACAATAGTCTAGAGACTATTGCGTGAGCATCTGGTAAGCTTTATCATATATATGTTTTTTAAACAAGAAAAAAAAAAGCCACCTTAAAGCCTTAAAACCATGCTGCTGGAAAATCTTTGCCCCCTCTTTTAGTGCATTTCTTCCTGTATTTGCTTGTTCGCCACAATCTTAAGCAGCAGAAGGCAAGCAAAGGAGACGAAATCTGTCTGGGGAATGCTTCAGCAGCCAATAAGTACCCCAGCACACTGCCCCCTGGCCGCCTGCCCCGGCCCGTGTGGAACACAGATGCTGAGTCCTCTCACTAACATCACCTGTGCCTCTCTGAACACCAGCAGTTAACCTTCAAGACATTCCACGTGCTAAAATTATTTATTTTGTAAGGAGAGGTTTTAATGAAAAACAACGGAAAAAAAAAAACTCCCTCTTTTTTTTATTTTTTGAATTTACCTTCCTTAAAATAGGTTATTGCAGCCGTCCTCAAAGGGTATGGTCATCTGTTGTTAAATTATGTCCTTAACTGTAACCAGTTTTTTTTTTAATTTATCTCTTTAATCTTTTTTTTTTTTATTAAAAGTTTCTTTGGATTCCTTGTCCTAGATTTGTATAAATGCCTTTTTTGTCTGTCTTTTTTTTTTTTTTTTCCTTTCCTCTTTGTTGTTTTGTTGAAAACAAACTGGAAACGTTTCTCTTTTTGTACACATGAGAGTTTGCAGATGTAGTGTATCACTGAGTCATGTGCAGTGTTTTCTGCCACAGATCTTCGGGCTGTCTAAGCTGTGTGTGTTGGGACACGAACAATGCAAGCATGTGTCATCCGCGTTCCCCTGCGTGTCTCCTGGAGAGAGAGAGGAACAGGGGAGCAGGGTCAGCCCACTGACAAACTTTAATTCCTAATTACTTCTGTGGCTGGAGAGTTTGAGGATTGCTTTTTAAAAAAGACAGCAAACTTTTTTTTTTTATTTAAAAAAAGATATATTAACAGTTTTAGAAGTCAGTAGAATAAAATCTTAAGGCACTCTTATAATATGGCATCTTTCCATTTCTGTATAAAAGCAGATCTTTTTTAAAAAACAATATTTCTGTAACTTAAGAAACCTGGCATTTAAATCATATTTTGTCTTTAGGTAAGGTTTGGTTTGTGTTTGTGTTTTGTTTGTTTTGCTTGTTCCCCCCCCCAAACCTTTTGTTTTTCTCTGTGAAACTTACCTTTCCTTTTTCTCTTCCTTCCTTTTTTTTTTGTATATTATTGTTTACAATAAATATACATTGCATTAAAAAGAAAA EMBV3_21592 GCCGAGTCTGAGGCTGATTTCAGTATACATTTCAATAGGTTCAACCCCGATGGGGAAGAG Gene GeneID:529230|CEP170:XM_002693990:273_cdna Constitutive 0 NULL GeneID:529230 16 GENE CEP170 MGC127959 centrosomal protein 170kDa EMBV3_25629 TGCTCCACTGCCTTCTATGGATGTGTGCGCTGCGGATGCGGGCCGAGCCGGCCTTTTATT Gene GeneID:100297242|LOC100297242:XM_002696198:225_cdna Constitutive 0 NULL GeneID:100297242 19 GENE LOC100297242 NULL hypothetical protein LOC100297242 EMBV3_09723 CTTCAAGCCAAAGTTATTGACACTCAACAGAAGGAGGCGATTCATAATCAGCTGTTAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38088 GAGTCTGGCAAGGTTAGGAAGAGGTCGAGAATATCAGTGACAGCACTCTGAGGAATCTGG Gene GeneID:616539|CHURC1:NM_001046581:217_cdna UTR3_Alt 1 NULL GeneID:616539 10 GENE CHURC1 MGC128554 churchill domain containing 1 EMBV3_26260 ACTGAGAAACAGCCAGAAGTGTGGAAAACCCAGTGTGTGCGTGCTCAGTCACTTCAGTCG Gene BVT0102_100541 + 1 EMBV3_16280 GK000008.2:92762918-92773690 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15004 CAGTACCATCCACATTGGAAATATACATGGAATATTGTAAAACCTACATGAGCAGATGAA Gene GeneID:517876|ARID2:XM_002687323:138_cdna Constitutive 2 NULL GeneID:517876 5 GENE ARID2 NULL AT rich interactive domain 2 (ARID, RFX-like) EMBV3_01125 CTGGTTCATCCCTAAGGGTCCCAACCGGGGTTGGCTGATTGCAATTCTGGCCCAACTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16266 ACTCAACTGCAGACTAGGGTGGAGTCCTCTGAAAGCCTCCAAAGTTCTCTAGGTGCACAG Gene BVV0102_221158 - 0 NULL GK000026.2:23101647-23535842 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18339 CCAACTGAGTAATGTCATTAAAGAAGGAAGTTTGGTCATGGAATGCATCTCCCCTAACAG Gene BVV0102_447682 + 0 NULL GK000002.2:119718531-119777717 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17430 CTTCTGCTCCTCCCCAACCCCCAAGGTTCTGGTTCCATCTTTCCTCTGTTCACAAACTAC Gene GeneID:618849|HMGA1:NM_001076523:170_cdna Constitutive 0 NULL GeneID:618849 23 GENE HMGA1 NULL high mobility group AT-hook 1 EMBV3_26424 TCAACAAGTTCAGTCTCGGGGTTGAGGAAGGTTCAAGTGATGAGGAGGAGCTGCCTAAGT Gene GeneID:783975|LOC783975:XM_002700320:40_cdna Constitutive 0 NULL GeneID:783975 X GENE LOC783975 NULL similar to melanoma antigen EMBV3_30940 AAGATCCTGGGTACATTCAAAAGCAAGAAGTGAGTTACCTGGCCTTCCAGCCTAGGCCGA Gene GeneID:524974|LOC524974:XM_002692552:183_cdna Constitutive 0 NULL GeneID:524974 14 GENE LOC524974 NULL similar to Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-75) EMBV3_28056 CGGGTCTTGATATAACCTGAGACTAGATTCTCTGGAGTAAATGAGACCCCTTTCCCAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03471 ACACATACAGAAGCATTTTATTCTGCCTGGAGGGTGCCTGGGAAGCTTGGCGCCGAATGA Gene BVT0101_045609 + 0 NULL GK000014.2:12332532-13769241 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052738 TCONS_00052739 TCONS_00052740 TCONS_00052737 1 XLOC_031568 NonCoding TCONS_00052740 XLOC_031568 NonCoding NonCoding - 14:12769153-12796273 - TSS39074 966 2 TCONS_00052740_2 87 4 0.964526715586858 0.0119835572107579 0.00988321928130808 0.00783323304177583 0.00606381032218989 0.00826994688158005 0.00190722264578348 0.00335519987397903 0.00143119073272171 0.00261166628087997 0.000400372009284122 0.000103083688603698 6.20116650278577e-10 0.000206272414819521 8.2327556199117e-05 3.48896993164611e-06 0 0 0 0.00753245970654496 0.00635338946399579 0.00268397561782489 0 0 0 0.00561905036060535 0.00668036888091515 0.00616769754157198 4.84103327294767e-95 2.41629538158664e-05 0 XR_229455.1 LOC101905547 PREDICTED: Bos taurus uncharacterized LOC101905547 (LOC101905547), 3e-08 64.4 83.87 0.0631469979296066 0 noncoding 1 1 1 1 -0.557361052266763 0.214590344765598 -0.0481383071481298 0.484299844388274 CATCCTCCTGGGCTGTTTGGATGCACGGAAAGGAAAAAGCAGGATGGGGAGCAAAGGAGCTGCCCTGTCCCGCCTGCTGCCTGCCTGGTACGGTAGACTGTTGTTGTTTTGTGGCTGGAGTGGGAGCTGTCATGTCCCGGGGCCTGCAGGCGTCCTTAACATGGACTCACCGCCAAGTGAGGGTTCTTGGCTTCTCGACAGGGGGAAAGAATTCAAGAGCCAGCCAAGGAAAAGCAAAGAATCAGGAATCATCCCAGGAGAATGAAAATATGGAGATCTTTTAGCCTACAACCTCATGTGGCAAAAAGCCTGTTATTGCTGCAGGTACTAAAGAAGAACGAAATGATCTCAAGCTAGGTCATAAAAGAGAGAAATCTAGGAGATGGAGAACCTGGAGCATTTAGCTTTTATTGACACATGGCTCAGCTTTTCAATTGTATCAAATTCAAAGCAATAAACACTCATCCGGTGTCCATCTCCCCAAGGTGCTCCAGGAGGCATGGAGAGGCGGAGAGGAAAAAACACAGCAGGAAAGCCTCCATATACATGTGGCCATGCTTTGGGGAGAAAACCCAAGTGCACGTTGGTTAGGGCTATAAGATAGGAATGTACAGTGTGCTGTGGGAACACATACAGAAGCATTTTATTCTGCCTGGAGGGTGCCTGGGAAGCTTGGCGCCGAATGACCGGACTGTCCCTGGCAATATGGATTAATAAGGCGCTAACTTTCAACCTTTTCTAATTGAGACTTACAGTTCAAAATTATTTTATATGCCTATTCTAAACACACAAACCCATGCACATGTACTTAAGTGTTACAAAATAATACTCTGTGAGGCACCCTTGTGTTTTGTTTTTTTTCCTTTCATTCTGTTTTTATTATTGTAGATGCTGGTTGAAACCCATTTAACTGAGCAACCTTGATCAATTAATGAATTGGGATCTCAACTTACAAAATTCTGGAAT TCONS_00052732 s 5' 436623 TCONS_00052732 s 5' 437280 EMBV3_12082 AAAAGGGAGATACTTCAGCTTCAACAACAGCATTAGCTAAGAGCTTAGAAGATGCCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16447 CACAGGCCTGGTGGACGAAGACACGTTCAAACTCATTTACTCACAGTTCTTCCCTCAGGG Gene GeneID:100336497|LOC100336497:XM_002691160:209_cdna Constitutive 0 NULL GeneID:100336497 11 GENE LOC100336497 NULL calsenilin, presenilin-binding protein, EF hand transcription factor-like EMBV3_20035 ATCATGAACAAGCTGTGGCTGGGCTTTGACCTGCAAGCCGCCATCAAGGCCCCCATCCTT Gene GeneID:787326|GGT5:XM_002694670:221_cdna Constitutive 0 NULL GeneID:787326 17 GENE GGT5 GGTLA1 gamma-glutamyltransferase 5 EMBV3_23064 TGCCAGCTTACTGGCTGCCTATGATGCCTGTGCCACCCCGAAGGAACAGGAAATGCTGCT Gene GeneID:528432|MUS81:NM_001046291:48_cdna Constitutive 1 NULL GeneID:528432 29 GENE MUS81 MGC137233 MUS81 endonuclease homolog (S. cerevisiae) EMBV3_07612 ACTAGGTGGTGCTTCCACTGAGCCTAACCATCTCCATCATCCAATGCACCCACATTTGTC Gene GeneID:404168|HNF4G:NM_205811:7_cdna UTR3_Alt 2 NULL GeneID:404168 14 GENE HNF4G NULL hepatocyte nuclear factor 4, gamma EMBV3_01880 GTATTACCCTGACTGGTGGGTCTATCCTCCCACTCTGAACATCATGGTATGTTGGGGCTA Gene BVV0102_402407 - 1 EMBV3_33472 GK000029.2:1121215-1223088 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15230 ACCCGCCACGCACTCGTTTCTCTGTAGACCCAGGAGATCTATGAATGGCCAAGAAGCTAA Gene BVT0101_058964 + 0 NULL GK000025.2:42589976-42683355 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32909 GCAACTTCTGTGCAATAACAAGTTGCCATACCCCGACTCTTAACAGTTGTAACAGGCTCC Gene BVV0102_385762 - 1 EMBV3_29128 GK000002.2:127248204-127251764 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11405 TGTGTTATTCTTGGGAACATGGCACCTGCTGAGTTTCACTATGGGCCCCCCTGGATTCTG Gene BVT0101_042129 - 0 NULL GK000021.2:59903294-60455655 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16737 CGGTGGATTAACCGGTCCCTCGAACAGATCCCCAGAGTCCGAACGTTTCCAACTGTAAAT Gene GeneID:789036|CASKIN2:XM_002696180:166_cdna Constitutive 0 NULL GeneID:789036 19 GENE CASKIN2 NULL CASK interacting protein 2 EMBV3_35787 TTGGAGGGTGTTCCTTTCTCACCAGCACTTGGCCTTTCACAGTGCACCTTATGTAGCTGC Gene GeneID:540159|ANKLE2:XM_002694448:39_cdna Constitutive 2 NULL GeneID:540159 17 GENE ANKLE2 NULL ankyrin repeat and LEM domain containing 2 EMBV3_23587 ATGGCGAGTGATTCCTTCATATGTTTCTTCCAAGTGAGCCTTGCTGTGGTCCCAGGGGGA Gene BVT0102_171110 - 1 EMBV3_42485 GK000026.2:43975498-44047470 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21617 ATGCTGATGTGCTGCGGAACTACCAGGAATACAGCCTGGCCAACATCATCTACTACTCCC Gene GeneID:327668|ATP5C1:NM_001075136:2_cdna Constitutive 2 NULL GeneID:327668 13 GENE ATP5C1 NULL ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 EMBV3_15848 TCCGACCCTGAGTACAGGGGGATGTGACAATTCCTGTGAGGTGTCAGTGTCCTTTGAGGA Gene BVV0101_020733 - 1 EMBV3_14006 GK000030.2:91303289-91347204 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247553 TCONS_00247550 1 XLOC_151357 Coding TCONS_00247553 XLOC_151357 Coding Coding LOC100847398 X:91319867-91377142 = TSS185355 595 1 TCONS_00247553_1 72 3 0.989663721758564 5.52249676121438e-10 3.96319671295795e-10 0 2.68619498110643e-10 1.52466235998519e-10 0 1.95873307788476e-05 2.34962101652907e-10 0 0.000206768532345174 1.72692232368462e-05 0.000150236598129433 0.000267639036833918 0.000145348933454807 9.0702779851954e-05 0.00230081271153684 3.34500867369182e-10 0.00257139314281383 0.000237021989620272 2.71183330983839e-10 5.45037474352523e-11 0.00723301047510282 0.00300474298945047 0.00198305501212179 2.17722199295864e-10 3.79334325266735e-10 1.1047162413116e-10 0.000145794347258681 1.90868635549608e-05 0.000798259707490662 XM_002700089.2 ZNF81 PREDICTED: Bos taurus zinc finger protein 81 (ZNF81), mRNA. 0.0 737 96.67 0.751260504201681 NM_007130.2 ZNF41 Homo sapiens zinc finger protein 41 (ZNF41), transcript variant 1, 8e-44 181 74.67 0.500840336134454 TCONS_00247553_1 sp|P51508|ZNF81_HUMAN ZNF81_HUMAN Zinc finger protein 81; 2e-13 66.2 58.62 0.791666666666667 1 noncoding 1 1 1 1 0.0223558641461208 0.842435829086358 0.0233432552539335 0.719922422776609 GCAGTTTTCTGCCGAGGTTTAATAGTTGTTGTGAAGAGGATCCCGTTGCTCTTTGCCGGAGCGGTGTGAAGGTTTTTTGGAATCTCTGCTTAGCCCTTGGGACAGACCCTGTGGTGAAGGCTGCAGGATCTTCCATATCAAGCATCAGCAGCTGTGGTTAAGTCCACAGGTGCCCACCTGACCTCGGGTTCCTGGGAAGAGCAGAGTTGTCAGCAAGAGACCTGTGGGTAAAGCCCAGCAGAAAGATGCCAGGCAATCGGAGTGCTGCTGGGCCGTCTCCGACCCTGAGTACAGGGGGATGTGACAATTCCTGTGAGGTGTCAGTGTCCTTTGAGGACATGACCGTGGACTTCAGAAGAGAGGAGTGGCAGCACCTGGACTCTGCTCAGAGGTTCCTGTACCAGGACATGACGCTGAAAACTACAGCCACCTCCTCTCACTGGGTATGCACAGCTACCCTGTGACTCTATGAGTGTTGTAGCCACGCGTTCTGGGAAACAAACTCACTCAGAAGGACAACGCAGATAGTGGAGTGCATTTTATGACACCGGCAGGCCCAAGGCAGAGTCTCCGTCTTAGCCAAGGACCCCGACCA EMBV3_19517 TTAGAAAAGCATAAAGCTGATGTTGTCAAGATGTTCAGTGGTTATGGAATCAAGATGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33213 CAAAGACAACACCAATAGATGGAGAGATATCATGTTCTTACATTGGAAGAATCAGTACTG Gene BVT0102_243518 + 0 NULL GK000002.2:3375710-4111870 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30235 AGCCAGACCACGTCCTTTGCCTTCAGTGTGACCAGCACGCCGGACAGCAAACCTGTGTTT Gene GeneID:518768|LOC518768:XM_002698191:723_cdna Constitutive 0 NULL GeneID:518768 25 GENE LOC518768 NULL similar to Nuclear envelope pore membrane protein POM 121 (Pore membrane protein of 121 kDa) (P145) EMBV3_20996 CTGCTTTCCATCTTGCTACCATGGATGAGATATCCTTGTAACCGCCAACCAAGTGATGGA Gene BVV0102_128672 - 1 EMBV3_25329 GK000017.2:38327235-39208175 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17727 GCATAGACGCCTTCCTGCCTTGGAGGACAATCAACTGTACAAGCTGGAGAGAGGAGGAAA Gene GeneID:530285|LOC530285:XM_002688141:38_cdna Constitutive 0 NULL GeneID:530285 6 GENE LOC530285 NULL similar to F-box protein 27 EMBV3_37805 TGTGTCTACTCTGCGGCAAGACTTTTACTCAGAAAGGCAACCTTCATCGACACATGCGTG Gene GeneID:540217|ZBTB26:XR_083803:158_cdna Constitutive 0 NULL GeneID:540217 11 PSEUDO ZBTB26 NULL zinc finger and BTB domain containing 26 EMBV3_26862 AACTAGAGTAAAGGGTCTAAGGCAGGGTGGACAGGGTGATGGGGGAGGCGGTCATAAGAA Gene BVT0102_446068 + 1 EMBV3_30035 GK000015.2:24815851-24838866 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10952 TTGCCTCCAAGGACCCCTCTTCTGGTAAACATTCCCTGCTGTCCACTCGCAAGTCCAAGA Gene GeneID:786875|USP48:XM_002698023:213_cdna Constitutive 0 NULL GeneID:786875 25 GENE USP48 USP31 ubiquitin specific peptidase 48 EMBV3_42228 AATAAGGATGTCAGAGACCTGTTTGTAGACCTCGTGGAGAAGTTCGTGGAACCCTGCCGC Gene GeneID:510968|FIBP:NM_001075482:583_cdna Constitutive 0 NULL GeneID:510968 29 GENE FIBP MGC134195 fibroblast growth factor (acidic) intracellular binding protein EMBV3_26168 CGTGGCTCAGTTTTCACAGCTTCAAACCAGAATTTGTTCCAGTCGAAGAGTGACTCCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17082 ATCTGCATACACAAGAAGTGTGTCAGCCTATCTCTTCTGTCACGGGCCTGCTTGCCTGAG Gene GeneID:532366|ADAM21:XM_002691046:443_cdna Constitutive 0 NULL GeneID:532366 10 GENE ADAM21 NULL ADAM metallopeptidase domain 21 EMBV3_30034 AATGCCGTCTCCTCGCTTAGCTTGGTCCACGATTCCTTGCACGACTTGACAGATGGAGTA Gene GeneID:506782|RFTN1:XM_002685189:72_cdna Constitutive 0 NULL GeneID:506782 1 GENE RFTN1 NULL raftlin, lipid raft linker 1 EMBV3_11249 CCTCGAAATTATGGCTTAACGGATGAAGAAAAGGCGGAAGAGGAGCGGAAGGCTGCTGAG Gene GeneID:511269|AK7:NM_001104972:214_cdna Constitutive 0 NULL GeneID:511269 21 GENE AK7 MGC152437 adenylate kinase 7 EMBV3_40128 AACAGTTATTCGCATGAGTTCTGGGGAGGGTCGGCACAAGGCTTTCACCACCTGTACTTC Gene GeneID:514235|LOC514235:XM_002697553:340_cdna Constitutive 0 NULL GeneID:514235 23 GENE LOC514235 NULL similar to olfactory receptor, family 2, subfamily M, member 2 EMBV3_03658 AGGACTGGGCGGGCACGTTTTGAAAAGCAACTGCAGAAATTCCTTACGATGATTGTGTGG Gene BVV0102_123203 + 0 NULL GK000021.2:61304085-61512981 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121802 TCONS_00121810 TCONS_00121808 TCONS_00121798 TCONS_00121804 TCONS_00121807 TCONS_00121799 TCONS_00121800 TCONS_00121803 TCONS_00121809 TCONS_00121806 TCONS_00121805 TCONS_00121801 1 XLOC_073487 Coding TCONS_00121803 XLOC_073487 Coding Coding DICER1 21:61508624-61567378 j TSS90646 9993 1 TCONS_00121803_9 1750 0.00530371259881917 29 0.83040865998332 0.00371415896218496 0.0037739331908111 0.003445512340623 0.00111544993568169 0.00166168343459321 0.000945475137552629 0.000452529648868352 0.000387728609190252 0.00126382679768109 0.00011302878400231 0.000124814266850796 1.54624175498729e-29 8.74756015517394e-13 0.000289317093897652 2.61679839510853e-05 0.00349054944044517 1.3153022479194e-15 0.00126027589492544 0.00433308072061772 0.00307202261485235 0.00168232989642347 0.00094488222365644 0.000841815153158406 0.00191602799385539 0.0071078015228676 0.00390487849646449 0.00141758803712233 5.48059567352653e-05 8.43322085829827e-05 4.58005053765534e-07 NM_203359.1 DICER1 Bos taurus dicer 1, ribonuclease type III (DICER1), mRNA. 0.0 6614 99.86 0.368157710397278 NM_177438.2 DICER1 Homo sapiens dicer 1, ribonuclease type III (DICER1), transcript 0.0 6295 83.84 0.598218753127189 TCONS_00121803_9 sp|Q6TUI4|DICER_BOVIN DICER_BOVIN Endoribonuclease Dicer; 0.0 2477 98.48 0.710285714285714 7 coding 1 0 1 1 0.132545061739334 0.597967503590229 0.00448585212181977 0.942579573578512 GGGGGTGGCAGAGGGTGAGAGGTTAGTTAGCATCACTCACTCAATGGATGTAAATTTGAGCGAACTCCAGGAGGTAGTGGAGGACACAAGAGTCTGGCGTGCTGCAGTCCACGGGGTCGCAGAGTCGGACATGACATAGTTACCTAGGGTATGAATTAATACAGACTTGGAAACTGAAAGAACTTAGAATCAGCATTTTGAGAGCAGAAGCTTGGGTATGCTGTGATTTTCCAATAAACTGCTATCACAATGTCAAAATGCAGTTCAGACAACAGCAACACAGAGATCTCAAACATTAAGACGTAAGCTGTGCTAGAACAAAAATGCAATGAAAGAGACACTGGATGAATGAAAAGCCCTGCTTTGCAACCCCTCAGCATGGCAGGCCTGCAGCTCATGACCCCTGCTTCCTCACCAATGGGTCCTTTCTTTGGACTGCCATGGCAACAAGAAGCAATTCATGATAACATTTATACGCCAAGAAAATATCAGGTTGAACTGCTTGAAGCAGCTCTGGATCATAATACCATAGTCTGTTTAAACACTGGCTCAGGGAAGACGTTTATTGCAGTACTACTCACTAAAGAGCTGTCTTATCAGATCAGGGGAGACTTCAACAGAAATGGCAAAAGGACGGTGTTCTTGGTCAACTCTGCAAACCAGGTTGCCCAACAAGTGTCAGCTGTCAGAACTCACTCAGATCTCAAGGTCGGGGAATACTCAAACCTAGAAGTAAGTGCATCTTGGACAAAAGAGAAATGGAACCAAGAGTTTACTAAACATCAGGTTCTCGTTATGACTTGCTATGTCGCCTTGAATGTTTTGAAAAATGGTTACTTATCACTGTCAGACATTAACCTTTTGGTGTTTGATGAGTGTCATCTTGCAATCCTAGACCACCCCTACCGAGAAATTATGAAGCTTTGTGAAAATTGTCCATCATGTCCTCGTATTTTGGGACTAACTGCTTCCATTTTAAATGGGAAATGTGATCCAGAGGAATTGGAAGAGAAGATTCAGAAACTGGAGAAAATTCTTAAGAGTAATGCTGAAACTGCAACTGACTTGGTGGTCTTAGACAGATATACTTCTCAGCCATGTGAGATTGTGGTAGACTGTGGACCATTTACTGACAGAAGTGGGCTTTATGAAAGACTGCTGATGGAGTTAGAAGAAGCACTTAATTTTATCAATGACTGTAACATATCTGTACATTCAAAAGAAAGAGATTCTACTTTAATTTCTAAACAGATACTCTCAGACTGCCGTGCGGTCCTGGTTGTCCTGGGACCCTGGTGTGCCGATAAAGTAGCTGGAATGATGGTCAGAGAGCTGCAGAAACACATCAAACATGAGCAGGAGGAGCTGCACCGGAAGTTTCTGTTGTTCACAGACACTTTCCTACGGAAAATCCACGCCCTGTGTGAAGAGCACTTCTCCCCTGCCTCGCTTGACCTGAAGTTTGTCACTCCTAAAGTAATAAAGCTGCTCGAGATCTTACGCAAATACAAACCGTATGAGCGGCAGCAGTTTGAAAGCGTGGAGTGGTATAATAATAGGAACCAGGATAATTACGTGTCCTGGAGCGATTCTGAGGATGACGAGGAAGATGAAGAGATTGAAGAGAAAGAAAAGCCAGAGACAAATTTTCCTTCTCCGTTTACCAACATTTTGTGTGGAATTATTTTTGTGGAAAGAAGATACACAGCCGTGGTCTTAAACAGATTGATAAAGGAAGCTGGCAAACAAGATCCAGAGCTGGCTTACATCAGCAGCAATTTTATAACTGGACATGGCATCGGAAAGAATCAGCCTCGGAACAAACAGATGGAAGCGGAATTCAGAAAACAGGAAGAGGTACTTAGGAAATTTCGAGCACATGAAACCAACCTGCTTATTGCAACAAGTATTGTGGAGGAGGGTGTTGACATACCGAAATGCAACTTGGTGGTTCGTTTCGATCTGCCCACAGAGTATCGATCCTACGTTCAGTCCAAGGGAAGAGCGAGGGCACCCATCTCTAATTATGTAATGTTAGCAGACACAGATAAAATAAAGAGTTTTGAAGAAGACCTTAAAACATACAAAGCTATTGAAAAGATCTTGCGAAACAAATGTTCCAAGTCGGTTGATACCGGGGAGGCCGACACGGAGCCCGTGGTGGATGACGACGATGTTTTCCCACCGTATGTGCTGAGGCCTGAGGACGGTCCCCGCGTCACGATCAACACGGCCATTGGGCACGTCAACAGATACTGTGCTAGATTACCAAGTGATCCGTTTACTCATCTGGCTCCTAAATGTAGAACCCGAGAGTTGCCTGATGGTACATTTTATTCAACTCTTTATCTGCCAATTAACTCACCTCTTCGAGCCTCCATTGTTGGTCCCCCAATGAGCTGCATTCGGTTGGCTGAAAGAGTCGTGGCTCTCATTTGCTGTGAAAAACTGCACAAAATTGGCGAACTGGATGACCATTTGATGCCAGTTGGGAAGGAGACTGTTAAATATGAGGAAGAGCTGGATTTACACGATGAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCCACAAAACGAAGACAGTGCTACCCAAAAGCAATTCCAGAATGTTTGAGGGAGAGCTACCCCAGGCCTGGTCAGCCCTGTTACCTGTACGTGATCGGAATGGTCCTGACGACACCTTTACCTGATGAGCTCAACTTCAGAAGGCGGAAGCTCTACCCCCCTGAGGACACCACAAGATGCTTTGGAATACTGACAGCCAAGCCCATACCTCAGATCCCACACTTTCCTGTGTACACGCGCTCTGGAGAGGTGACCATATCTATTGAGTTGAAGAAGTCCGGCTTCACGTTATCTCTGCAAATGCTTGAGTTGATCACAAGGCTTCACCAGTATATATTCTCACATATTCTTCGGCTTGAAAAACCTGCACTAGAATTTAAACCCACAGACGCGGACTCAGCCTACTGCGTTCTACCTCTTAATGTTGTTAATGACTCCAGCACTTTGGACATTGACTTTAAATTCATGGAAGATATCGAGAAATCTGAAGCTCGAATAGGCATTCCCAGCACAAAGTATTCAAAAGAAACTCCTTTTGTTTTCAAATTAGAAGATTACCAAGATGCAGTTATCATTCCAAGATACCGCAATTTTGATCAGCCTCATCGATTTTATGTCGCTGACGTGTACACTGATCTTACCCCCCTGAGTAAATTTCCTTCCCCTGAGTATGAAACGTTTGCGGAGTATTATAAAACAAAGTATAACCTTGACCTGACCAATCTCAACCAGCCGCTGCTGGACGTGGACCACACGTCTTCACGACTCAATCTTTTGACACCTCGTCATTTGAATCAGAAGGGGAAAGCTCTCCCTCTGAGCAGTGCTGAGAAGAGGAAAGCCAAGTGGGAGAGCCTGCAGAATAAGCAGATACTGGTTCCAGAACTCTGTGCTATACATCCAATTCCAGCATCACTGTGGAGAAAAGCCGTTTGTCTCCCGAGCATACTTTACCGCCTTCACTGCCTTCTGACTGCAGAGGAGCTCAGAGCCCAGACGGCCAGCGACGCTGGTGTGGGAGTCAGGTCACTTCCTGTGGATTTTAGATACCCTAACTTAGACTTCGGGTGGAAAAAATCTATCGACAGCAAATCTTTCATCTCAATTGCTAACTCCTCTTCAGCTGAAAATGAGAATTACTGTAAGCACAGCACAATTGTCGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCCCCTCTAGAAAATCATGACCAAATGTCTGTGAACTGCAGAACGTTGTTCAGCGAGTCACCTGGTAAGCTCCAAATTGAAGTTTCAACAGATCTGACAGCAATTAATGGTCTTTCTTACAATAAAAGTCTTGCCAATGGCAGTTACGATTTAGCTAACAGAGACTTTTGCCAAGGAAACCATCTGAATTACTACAAGCAGGAAATACCTGTACAACCAACTACCTCATATCCCATTCAGAATTTAGAGAAATGGGAAAAAGATGAAATGACAAAAGACTGCATGTTGGCTAATGGCAAACTGGACGATGACTTCGAGGAGGAGGAAGAGGAGGAGGAGGACCTGATGTGGAGGGCTCACAAGGAGGATGCGGACGATGAGGACGACTTCCTGGAATACGATCAGGAGCACATCAAGTTCATAGATAACATGCTGATGGGGTCAGGGGCTTTCGTCAAGAAAATCTCTCTTTCTCCTTTTTCTGCCACCGATTCTGCATACGAGTGGAAAATGCCCAAAAAGTCCTCCCTTGGTAGTCTGCCATTCTCATCCGATTTTGAGGATTTCGACTACAGCTCCTGGGATGCGATGTGCTATCTGGATCCGAGCAAAGCCGTTGAAGAGGATGACTTTGTGGTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGTGTGGACACAGGGAAGCAGTCCATCTCTTACGACCTGCACACCGAGCAGTGCATTGCCGACAAAAGCATAGCCGACTGTGTGGAAGCCCTGCTGGGCTGCTATTTAACCAGCTGTGGCGAGAGGGCTGCTCAGCTTTTCCTCTGTTCGCTGGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCATGTGCCCGACCAGGGAGAATTTCACCAGCCAACAAAAGAACCTTTCAGGGAGCCGTGCGGCCGCCTCTGGAGCCGGCTACCGAGCCTCTGTGTTGAAAGACTTGGAGTATGGGTGTTTGAAGATCCCCCCGAGGTGTATGTTTGATCACCCCGACGCAGACCGGACACTGCGTCACCTGATCTCGGGTTTTGAAAATTTCGAAAAGAAAATCAACTACAGATTCAAGAATAAGGCTTACCTTCTACAGGCTTTTACACACGCCTCCTACCACTACAATACGATCACGGATTGTTACCAGCGCTTAGAATTCCTGGGAGATGCAATTTTGGACTACCTCATAACTAAGCACCTTTATGAAGACCCACGGCAGCACTCCCCAGGGGTCCTGACTGACCTGCGCTCTGCTCTGGTCAACAATACCATCTTCGCGTCTTTGGCTGTGAAGTATGACTACCACAAGTACTTTAAGGCCGTTTCTCCCGAGCTCTTCCATGTCATCGACGATTTCGTGCAGTTTCAGCTCGAGAAGAACGAAATGCAAGGAATGGATTCTGAGCTTAGGAGATCCGAGGAGGATGAAGAGAAGGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTCGAGTCACTCGCGGGCGCCATTTACATGGACAGCGGGATGTCGCTGGAGACGGTCTGGCAGGTGTACTATCCCATGATGCGGCCGCTGATCGAAAAATTTTCTGCAAATGTGCCCCGTTCCCCTGTGCGAGAATTGCTTGAAATGGAACCAGAAACTGCCAAATTCAGCCCAGCTGAGAGAACCTACGATGGCAAGGTCAGAGTCACCGTGGAAGTGGTCGGGAAGGGGAAGTTCAAAGGCGTTGGCCGAAGTTACAGGATTGCCAAGTCTGCAGCAGCAAGAAGAGCCCTGCGAAGCCTCAAAGCTAATCAACCTCAGGTTCCCAATAGCTGAAAACCCCTTTTTAAATTAAAAAAAAAAAAAAAAAAGGAAAGCAGAATTAAGGTGGAAAATATTTAAGTTGAAAAGGATGATTTAAAACTGATAGTGAGTGGAACGAGTTGAAGGCAGAACGTAAAGTTTGTTTGATAACAAGATAGATTACAGAATAAAACATTTAACCTATGTATAAAAATTTTGGAACTAACTGTAGTTTTAGTTTTTTGCGCAAACACAATCTTTCTTGTCTTCTTTCCTCACTTCTGCTTTGTTTAAATCACGAGAGTGCTTTACTGATGACATTTTCGCAAGTGTTCAAAGTGATTCTTGACAGTTTTTGTCTTGTTTCATTTTAGTTTAATTTTGGTCGGTTTTGCTTAGAGTTAGGAGTCCAAGGAGCTTAAACCTGAAACAGCACCCCCCCCACAACGGGTTCTGTTGAGAGCTCTGGGCAGCCATCAGCGTGCGTGGCAGAGCCCGCCCTGCGGCGTCGATAAGCCGAGCAGAGGGATGCGGTTTGAGAGAGGAGTGTGCTGGTGCTGTCTCTCCTTTCCACGTTGTGTCGCATAAGACGATGCTTCCCGGTCACTGTTGCACTTACTAGTAAGGGACAGACTGTTGATCAGCATGGGCCGGCGTGTTGGCAGATCACATTCAAGTTTTCTCATGCCATGCTATCTTGCATAAAAGAGGTTCTTGCCTTAAAAGTAAAATCCTTGTGGATATTCTTTCACTTCTGATCTTTCTGGAACAAACTGTTCACATTCCCTTCATTCTGTCTATTATGCATTAGACCTCGAGACAGCGTGATACTTAACGACTCACTAGTATAGCTGTAACCTAACTAATGACAGGATTATATGAGAATTTCTGTCAGGTGTACTGAAGACATTTTCAAAACCAGAATATGTAACCTATGGATTTTTTAAAAGATACATCATAAGAATCATCTTTGGCTAAATACCCCACTTTTACTAGAAACCTCCAGCTAGGTAGTTCCACGGATGGAAATTGTCTGTGGCAAATAAACCTTGCCCTGTAGGCTGTTGCTCTAACAAAATAAACTTTATACATATCACACCTAAAATATGCTGCAGATCTTACAATGGATTGATTACTTACTTAAAGAAGCAGAACAGAGCACCTTACCCTGAGTCTTCTCACATACATTTCTTACTGTGCTTTTCACAGTGTTGCATGCAGACTTCACCTACCAAAGCTGTGCTGTTAATGCCATGAAAGTTTAACGTTTGCGATAAACTGCCGTAATTTTGATATGTCTGTGATTTAGGCCATTAAAAATTTAGGTAAACTAGCTCATTGTTTCCATCTTTGGAAAAGGAAGAAAAAAAGACACTTTTAGGCGTTTGCCTAAGTTTCTTTAATTAGACTTGTAGGCACTCTTCACTTAAATACCTCAGTTCTTTTCTTTTGCATGCATGTTTCCCCTCCCCATTTGGTGCTACGTTTATGTATTATGCTTGAAATTTTAATTTTTTTTTTTTGCACTGTAACTATAATACCTCTTAATTTACCTTTTTAAAAGCTGTGGGTCAGTCTTGCACTCCCACCAACGTACCAGTAGAGTTTTGCTGCAATTGCCCCTTAATTATGCTTGAAATTCAAGAAAGCTGAGCAGAGGTGTCTCGTAATTTCCAGCACATCATTCTGAATGTGACGCCTCATATAATGCTGCATTGATATTTTGAATTGCAGTCGAATACTGTACTTCTCGCTTTATCTGCGCCACCCACCCCCAGAGAAACACCTCTGCACGCGTGTACCCAGAAACCTGTCCGCTCCGCTTTCTAAGGAGACCCGAGTGAAGGGAGCATTCAGCTTCTCCCACATGGTTTGTCGTCTCCAACCTTAAACTTCCACTGAGATCTCAGTTACTAAACGAGCTTTAGAGCAAATTTATTTGGATGGACATGTTTTTTAAAAATTTAATTCTGATTTGGAACCTTTGATTTCTATTTGATTTTTTTTTTTAAAGACACCTCCATGTAAGATCTCCTGACAATGTAAAACCAGGCGCTTCTTGAATTACATAACTGTAAATGTGTCAGGCTGGATATGAATTTTCCTTGTGAGGGTGATTCGTGATAAAGCTGTATCACAAATCTCTTGATAAGTATAAACTACCTGCTGCCAGGAGCTTAGGGCCTTGCGTTGTGTCTAATGCACTAATCCCAGTGTCGAGGCGTCCTCTGGCCTCCTGGCACCAAAATCAGATTGTTTCACAGTTACAATCCCCGTTGGGAGAAAAATGCCTCAATATATTTTGTAACCTTAAGAAGAGTATTTTTTGTTAATACTAAAAAGTTCAGACTTGGATAAGATTAGGTCACACAGTCTCAGGGGTTCAAATTTCCTGCTATCATTCAAAATGTTTTATCAACAGCAGACTTTAGCTATTGCTTTTTTTTTTTTTTTCTCCTTTTGGTTGGAGGACAGTAGCAGATTTTAGTTTGTGACTCACACTTTGAAGCAATCTCTGATCCCCTGGTTCCCAAGTTGAAAAGTCAAAACTCTGATGTAGATATACGAAATGGTTATGAATGCTTTTGTGCTGCTGATTTTTTAATGCTGTAAACTTCCCCCCAGTTTAGCTTACTGAAATGTTTTGCATCCATTTAATTAAGGGACAAAAAAAAAATTGCTCTCTGTCACCCACTCGACCACCTTGTCTGTCATCCTTTTGTTCCTGTGATTGCCACGTGGGACCCGGTGTGATCTGGAAGCCCCCCTGGTGGGTGGTGTGGTTGTACGGCCAGCACACGCGGGAAGGACTGGGCGGGCACGTTTTGAAAAGCAACTGCAGAAATTCCTTACGATGATTGTGTGGAGGTTAGTTGGCATGAACCTTCATTGTAAATGTTTTTTGATTTTTTTTTTTAAATAATACTTTCAGCAGTCCTGACTATGCTGCGTTTTGTAAAAGCTTTTTCCCCCTCTGTTCTGTTCATGTAGCACAGATAAGCATTGCACTTGGTACCATGCTTTACCTCATTTCAAGGAAAATATGCTTAACCGAGAGGAAAAAATGTGGTTTGGCCTCGCTGCTGTTTTGATAAACCGAATTTGAAAAAAAGATAATTATAATGCCTGCAATGTGTCATATACTTGCACAACTTAAATAGGTCATTTTTGTCTGTGGCATTTTTACTGTTTGTGAAAGTATGACAAAGATTTGTTAACTGAACTCTTAATTATGTTTTAAAGATGTTTGTTAACTTTTTCTTTTCTCTTTTACGTTATGTGAAATGATTAAATTTAGAACAACCTCTAACACTCCTGTAAATTATCTTTTAAAATGCTAGTATTTTTCCTCTCTTAATAATAGCTTGCCCTCAGAAAGATTCAAACTACCCTGCCTAAATAGCAAGAGACTGGAGGCTACTCTGGTTCTGTCGGTTCAGTTCATAAGTACAATTATTCACACAGCAGTCGGCTCTTGGAGTCATCACCTGACATTGGCCGGTGACTGCAGAGTGCAGAGACTGATCGAGATGCAGACCCACCTCAGTTCAGTCTTCAGGCCCCGTTGATTTAAAACTTTCTATCTTGCTCTGTTAGGGTATCTAATCCTTTTACACAACATTTAAGCCACCAAACTGAGACCTTGATATCTTCATTTGAAACAGCATCTGAAGTTCTGTTAGCGCCCTGAACCAGTTTGTGTTCGCTACGGAACTGAAACTCATGTCTTGTTTATTACCTATATGGTTATTTTAATTACATTTAAATAGGTATATTTTTTCAACCACTGATTGCTTTTCAGGAACTTAATTATTTCCAAATAAATTTCTTTATTTTATATTGTACATGAGAAGTTTTTAAGATATGTTTAAGACCAAGAATATTGAAATGATTTTAAAAGTTGTTGGAATTTGCCAGTAGCAATACCTAGGGAATTTGCATTGAGACTATTGTATTTTCCACTAGAGGTGAAAATGATGTTTTGAAACTAACTTGTAAATATATTTTAATCATTGTGTTTTTGTTTTTTTTCCCCCTCTAGTCCATTTTTATTTGGACATCACCCACCATTTAAATTTTCTAGATGCACTCAGAATTCACTGCAGCAGCAGGTTACGTAGCAAAAATGCAAAGGTGAACAGAAAGTGAAATTTCTGGCTTTTCTGCTGTAAATAGAACGAAAGAAAAATGACTAAAATCAAGTAAGACTAACATGTATAATTTGACAATAAAATACTTAGCATCACATGCTGCAGCTGTTTTTAAGGAACATGATGTGATTCGTTCATACAGGAATCATGCTGCAGAAGTTCGCAGTCTGCACCTTAAGGGTCACGATTACCTTTAGTCGTTTTTTGTTTTTGTTTCTTTCTTTTGTAATAATTGTAGCCAAGTAAATCTCCAATAAAGTTATGGTCTGTTCAC EMBV3_07347 GCACTAGCGAAGAGGACGGCATGGTGGGCACCCTGGAAGGAGCACCTCTATCAGCTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12415 CCAAAATAAAGTTTCCAAATCCTGTTTCCAGCAGCATCCCTTCTGAGACTGCCCTTCAGC Gene BVT0101_022335 + 0 NULL GK000003.2:31764446-31876487 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08979 AGGAACCATGACTGGGGTGAGGGGAGACTGGAAGGAGAGACGCCAAAGGTTAAAACTGTA Gene BVT0102_030600 + 0 NULL GK000005.2:115697602-115849604 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12059 ACAGACCTTAGCAGAATCTTGAAAAGCCCAGAAATCCAAAGAGCACTCCGAGCACCACGC Gene GeneID:510547|RPL4:NM_001014894:131_cdna Constitutive 0 NULL GeneID:510547 10 GENE RPL4 NULL ribosomal protein L4 EMBV3_01267 TTCTCCTTTCATACTTGTTAGCATTTGTCTTATGTACTGTGGTGCTCCCGTGTTGGGTGC Gene BVT0102_224935 + 1 EMBV3_08382 GK000008.2:89209456-89950479 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00218178 TCONS_00010367 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00198662 TCONS_00022064 TCONS_00056147 TCONS_00073692 TCONS_00116799 TCONS_00250553 TCONS_00019991 TCONS_00098385 TCONS_00189806 TCONS_00165811 TCONS_00032587 TCONS_00197973 TCONS_00141355 TCONS_00207228 TCONS_00031938 TCONS_00250544 TCONS_00239410 TCONS_00141464 TCONS_00177994 25 XLOC_142855 XLOC_131641 XLOC_005918 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_120316 XLOC_012735 XLOC_033950 XLOC_045454 XLOC_070965 XLOC_153496 XLOC_010669 XLOC_058631 XLOC_115843 XLOC_100651 XLOC_018827 XLOC_119632 XLOC_085783 XLOC_125746 XLOC_018183 XLOC_153487 XLOC_146076 XLOC_085892 XLOC_107767 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_35554 TCCCGGGTTGGGGCCGTGGCCGTGGCCTTGCCTAAAGCAGGACATCCAAAATGAGAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24625 TGAGCTGGTCATGTTTGGTCTCTGTGGCCTCGTAATTGTGGGCACTATACTTGTGGTCCT Gene GeneID:615000|LOC615000:XM_002686610:114_cdna Constitutive 0 NULL GeneID:615000 3 GENE LOC615000 NULL similar to olfactory receptor Olr1346 EMBV3_16608 AATACCTGGACTTTGCTGGTGGTCCAGTGGTTAAAACTTGTGCTTCCACTGCAAGGGGTC Gene BVV0102_139157 + 0 NULL GK000021.2:22158990-22166072 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123072 1 XLOC_074626 NonCoding TCONS_00123072 XLOC_074626 NonCoding NonCoding - 21:22162322-22162963 - TSS91831 641 1 TCONS_00123072_1 56 0.180967238689548 1 0 0 0 0 0 0 0 0 0 0 6.41886579345379e-06 0.000817821565360477 0 0 0 0 0.00185416498517322 0 0.000978585125754956 0 0 4.73592975578475e-06 0 0.00259763450576688 0.000758461886987129 0 2.19827082186158e-05 6.39844244048704e-05 4.49539923007818e-05 3.02939387315091e-05 0.000140692660345239 XR_239284.1 CCDC13 PREDICTED: Bos taurus coiled-coil domain containing 13 (CCDC13), 3e-17 93.3 82.29 0.146645865834633 0 noncoding 0 0 0 0 -0.92837095156173 0.0220407835974145 -0.0213571382324546 0.700892434559568 TTAAACATTAGGTTATCAAATTATATTGACACAATGATCTCCAAGTTCTTTCCAATTCCAGAGTATGATTTATGGGTTAATGCCCTTACATTCATAATTCCAGGCACTGATCTTTTTTCCTGTCGTGCTACATGGCACACAGGATCTTGGCTCCCTGACCAGGGATCAAACCTGGACCCCTTGCAGTGGAAGCACAAGTTTTAACCACTGGACCACCAGCAAAGTCCAGGTATTAATCTAACCTAGGAAAGAGACCAACTCTTAATCCCATGGTTTCTAACAAGGCTGTTGTATTCTGAACATCACATTTTATAAACTGGATTACTTACATACATATTTTAACTATTTCTGAACTGGAAATGTGCATTCTACTACAAAGGGCAAAAGAGGCATCATTTTTTTCTACCACATACCATAAAGGGAAATCTGTCAGAACAAAGATGGTACAATTATGAGTCCATACAGCGGTAATACTTTAAACAAATGGGATCAAAGTATGTGTAAAATTTAGTATCCTTTAAGAAATGGAAGCTGAAAAGTATATTAAAAAAATTTCAATCAAGCACAAGTAATCCACCTTCCTGAACTGCAAACACTTCCTCAAGTATACATTAGGGATCTGGTTCTGGTTTTGATGTAAC TCONS_00120695 TCONS_00120696 TCONS_00120697 TCONS_00120698 TCONS_00120699 . 3' 104 TCONS_00120695 TCONS_00120696 TCONS_00120697 TCONS_00120698 TCONS_00120699 . 3' 744 EMBV3_17317 CTGATTACCGTGAAGATTAGCAGGACCAAGTGCAAGAGGAACAGCACGAAAAACCGCTCG Gene GeneID:523331|CSTL1:XM_002692164:63_cdna Constitutive 0 NULL GeneID:523331 13 GENE CSTL1 NULL cystatin-like 1 EMBV3_02698 TAAGAGATCCCCAGACCTCATCCAGCCTTTGCCTCTGTCCCTGACTCCACCCTAAGAAAA Gene GeneID:282324|PRKAG1:NM_174586:17_cdna Constitutive 0 NULL GeneID:282324 5 GENE PRKAG1 MGC137928 protein kinase, AMP-activated, gamma 1 non-catalytic subunit EMBV3_30737 GATAAGGGCACTAGGGCTGGTCTTACTTTGCATCACCACTGCTTTACTCCACTGCCGTCA Gene GeneID:100336714|LOC100336714:XM_002690137:15_cdna Constitutive 2 NULL GeneID:100336714 9 GENE LOC100336714 NULL autophagy protein 5-like EMBV3_07345 ATTTCTAGGCTTGTGGGGAGGTTTTACAAAATGTCAGGGGTGCTCCCAGCGTACGTGATG Gene GeneID:617896|UNC119B:XM_002694524:449_cdna Constitutive 0 NULL GeneID:617896 17 GENE UNC119B NULL unc-119 homolog B (C. elegans) EMBV3_42434 GTTACAAACGTACTGGGATGAGTACTGGCATTGATGCTGAGTGCCATTTTGTACTTCCCC Gene GeneID:519694|ARL5A:NM_001046245:91_cdna Constitutive 1 NULL GeneID:519694 2 GENE ARL5A MGC128509 ADP-ribosylation factor-like 5A EMBV3_31819 GCCAACAATGGTGGTACAGGGAGTCAAAATGCTCTATGTTCCTATAGTGCCTGGTCATGC Gene GeneID:518834|UBA6:NM_001083438:35_cdna UTR3_Alt 2 NULL GeneID:518834 6 GENE UBA6 MGC140422 ubiquitin-like modifier activating enzyme 6 EMBV3_17469 AATGTGGGGAGCCTCTAGAAACTGGGGAAGGTCCCCCAATGAGGCTAGAAGTTAGTTGTA Gene BVV0102_121079 + 1 EMBV3_03788 GK000024.2:35519621-35529295 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138870 TCONS_00138868 1 XLOC_084755 Coding TCONS_00138870 XLOC_084755 Coding Coding USP14 24:35524198-35565134 j TSS103982 2966 1 TCONS_00138870_2 456 0.0566419420094403 18 0.927983388298522 2.0499067603515e-20 0.000284879727888881 2.14388945363539e-28 5.98574326443821e-22 3.70566053247456e-12 0.000497167725285693 5.47750812197125e-42 1.16653582065718e-126 0.000246693402778756 8.98436762168803e-33 3.2778708224699e-22 1.55024130516761e-23 2.20480290277643e-29 4.449051928894e-16 1.5847754241967e-92 0.000161567303120961 1.49667973464862e-28 0.000150976443715591 0.00017787902664078 0.00119064029914168 0.000271595575901475 2.45061855619201e-31 4.75176779248067e-28 2.08884536788552e-29 0.000168632776298089 2.96107318567844e-32 2.85587904907278e-05 2.41696575099623e-28 6.89882863322604e-23 2.38267670467411e-17 XM_005224119.1 USP14 PREDICTED: Bos taurus ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) (USP14), transcript variant X1, mRNA. 0.0 4608 99.81 0.865475387727579 NM_005151.3 USP14 Homo sapiens ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) (USP14), transcript variant 1, mRNA. 0.0 3124 87.91 0.835805799055968 TCONS_00138870_2 sp|Q0IIF7|UBP14_BOVIN UBP14_BOVIN Ubiquitin carboxyl-terminal hydrolase 14; 0.0 909 99.77 0.962719298245614 2 coding 0 0 0 0 0.0259602671413665 0.812212661292192 0.00410274448342136 0.930780935956624 ACATTTGCAACCCAACTCCAGCCAAACAGGAAAAGACAAGTTCTTTCCTGCTTTGATGCTCAAAAGGGTGATTTCCTGAGAGCTCAGATTTTAAATGAACATATCCTGGTTAGGAGGCCAGTGTAACCACAAGCGGCTTTATAAAGAGGGAGGCAGAGGCTCTGAGTGAGAAGAGTTGCTGGGCGGATGCAAGCCGAGGTCAAATGGTGCCTTGGCTGGAGTGGGGCCAGAAGACGAGGAATGTGGGGAGCCTCTAGAATCTGGGGAAGGTCCCCCAATGAGGCTAGAAGTTAGTTGTACCAAAAGTTGGGGCTGTGTGTGTTGAAAACAAACTTAGACTACAAGACTCCCTGGTCATGGATAGAACAAGCAAGCTCAAAAAAATTTCTCTTACAGCATCTGTTACTGTGAAATGGGGAAAGGAGAAATTTGAAGGTGTAGAATTGAATACTGATGAACCTCCGATGGTGTTCAAGGCTCAGCTTTTTGCACTGACTGGAGTCCAGCCGGCCAGACAGAAAGTTATGGTGAAAGGAGGAACACTGAAGGATGATGATTGGGGGAACATCAAAATGAAAAATGGAATGACTGTACTAATGATGGGGTCAGCAGACGCTCTTCCTGAGGAACCCTCAGCTAAAACTGTCTTTGTAGAAGACATGACAGAAGAACAGTTAGCATCTGCTATGGAGTTACCATGTGGATTGACAAACCTGGGTAATACTTGTTACATGAATGCCACAGTTCAGTGTATTCGTTCTGTGCCTGAACTCAAAGATGCCCTTAAAAGGTATGCAGGCGCCTTGAGAGCTTCAGGAGAGATGGCGTCCGCACAGTACATTACTGCAGCCCTTAGAGATTTGTTTGACTCCATGGATAAAACTTCTTCTAGTATTCCACCAATTATTCTACTGCAATTTTTGCACATGGCTTTTCCACAGTTTGCAGAGAAGGGCGAACAAGGACAGTATCTTCAGCAGGATGCTAATGAGTGTTGGGTACAAATGATGCGAGTATTACAGCAGAAATTGGAAGCTATAGAGGATGATACTGTTAAAGAGACAGATTCTTCATCTGCATCAGCAGTGACACCTTCTAAAAAGAAAAGTTTAATTGATCAGTTCTTTGGAGTTGAATTTGAGACGACCATGAAATGTACAGAATCTGAAGAAGAAGAAGTCACTAAAGGAAAGGAAAGTCAGCTTCAGCTTAGCTGTTTCATCAATCAAGAAGTCAAGTATCTTTTTACAGGACTTAAGTTGCGACTTCAGGAAGAAATCACCAAACAGTCTCCAACATTGCAAAGAAATGCTTTGTACATCAAATCTTCAAAGATCAGCCGGTTACCTGCTTACTTAACTATTCAGATGGTTCGATTTTTTTACAAAGAGAAGGAATCTGTGAATGCTAAAGTTCTTAAGGATGTGAAATTTCCTCTTATGTTGGATGTGTATGAACTATGTACACCAGAACTTCAAGAGAAAATGGTTTCTTTTCGATCAAAATTCAAGGATCTAGAGGATAAAAAAGTAAATCAGCAGCCAAAGACAGGTGACAAAGACAGTAGTCCCCAAAAAGAAGTTAAGTATGAGCCCTTTTCTTTTGCTGATGACATTGGCTCCAATAATTGCGGATACTATGATTTACAAGCAGTGCTAACGCATCAGGGAAGGTCTAGCTCTTCAGGCCATTATGTATCATGGGTGAAAAGGAAACACTTTAGATGAATGGATCAAGTTTGATGACGATAAGGTCAGCATTGTAACACCAGAGGATATCTTACGACTTTCCGGTGGTGGAGACTGGCACATAGCTTATGTTCTACTCTACGGGCCTCGCAGAGTGGAAATAATGGAAGAGGAAAGTGAACAGTAATCTTCATTTTAGCTATTTATGCTTAGGTGTGAAATAAATGTTATTTGTTGATCATTTCTATAACCCAGAGCTTTGGAGGAAGATTAGTTTAGGTGGTTTTATGTGTTTCCCCTCATGTGGAACAAGAGAGGGCAGAAGCAGACCACTCTGTGTTACCAACCTAAGAAATTACAGAAAAGAGAAAATTGCCTTTGGACTGTGCTGCCCTGTGTAAAGGTGGCAGGAAGAACTTTTTAAAAAGCTTATTGCTTGGATTAATTTTTAAAAATTATGAGTTGAAATGCCTTTCAACCATTATTACCTTCTGTGATAATTTTTCTGTCTTTTTCAGCCCAAGATTCAGCAATCAGATGTTTATTGCACACCTATTACTCTATTATTTGTTGTTCTTGCATGGTTCAAACCACCAGTGATCCAATAGCTGCCCATCCTTTGCCTTATCTAACACAAATGTTGCCAGGAAGGTGGAAGGAAGTAAGTTTGATCTCATTGTGTAACTCAGTGCTGCGTCCCCACCCCCATGCAAACATGGGTACAATCAAGTATTTGTCCAGCCTGACTGTTGCTGGCTTTTCATGACTTTAAAATAAATTGTGATCAAATAATAGTACATTTGATTATACATTTGTTACTGTGTCTCTGATGTACTATGGTTTGTACATTGAACTTTGCTATGGTTTTGTAGTAATGAACCTTAAAATGTTGACAAGCTCCAGTTGCTTATTTTTAGAAAATGAGGATATTTAATAAAAAAAGAAAAAAGAGGGACTAACAGCTTTTGACCTCAAGTCTTTTGTCTGTTGGAGCTTGGCTGAAGTTCAGATATGTTTAATACTATTATAGTTTCTGCAGATGGTTAATTATGCTCTCAAGCATCTATCTGAAAATAGTATCTTCTTCACCTGCTAGCCTAATACTGTTTAAAAAGAAACACAAAGTTGTGATTGGATAATGAATGCAACCATGTTTATCAGATCTGTTCTTTGGCTCAGTTGGGTGTTTGGTTCTACTCTGTCAACTCCCAACTTCATGTCTATCTCAAAATTTAATACCAGTGATTTTTAGGAGAAATATCAAGAGTATGAGATACT EMBV3_16757 TGTTAGCTCCAAGCGGACCCGTGGTTCAAAAGTGCATTACTTAGTTTGAGCTCTGTAGGT Gene GeneID:789846|ZNF503:XM_002698918:126_cdna Constitutive 0 NULL GeneID:789846 28 GENE ZNF503 NULL zinc finger protein 503 EMBV3_33379 GGCCAGCCCTCTCTTACCTGTGTGTGTTCTAGTGGTGCCATTCTTCCTGTGCTACAACTA Gene GeneID:100337041|LOC100337041:XR_083607:452_cdna Constitutive 0 NULL GeneID:100337041 2 PSEUDO LOC100337041 NULL sphingosine-1-phosphate phosphotase 2-like EMBV3_06523 GAAACATTTCCCAAACCATCACCCTGGTTTAAGGGCATCTGTCATCCTGCCTTCCCATCG Gene GeneID:513969|LOC513969:XR_084571:1_cdna Constitutive 0 NULL GeneID:513969 13 PSEUDO LOC513969 NULL similar to ankyrin repeat domain 26 EMBV3_29572 CTGTGATGAGTCCTGACTTTAGGGGACTCTTTACCTCTTCTCAGTGTCTATGCAGAGAAC Gene BVT0102_076826 + 0 NULL GK000009.2:15249646-15453770 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236682 TCONS_00236683 1 XLOC_144548 NonCoding TCONS_00236683 XLOC_144548 NonCoding NonCoding - 9:15429819-15431478 - TSS177131 1659 2 TCONS_00236683_3 78 0.992163954189271 1 0 1.02046179578941e-06 7.53810262712218e-07 2.78613245801786e-06 2.50249007551004e-05 0 0 0 4.75187308533646e-06 4.7297411263694e-07 3.08079847804626e-08 2.51961186017073e-11 1.29598471905393e-09 0.000111265950686505 0 4.43468509634067e-06 0.00402211337803564 0.00135099577534313 0.00361213572261347 7.18173713149799e-07 0 2.13382006182131e-06 0.00169478326507658 0.00194845360502324 0.00165220457452341 4.1740308636801e-06 0 1.17537699284272e-06 0.000225195849915487 0.000334749747231614 0.000453604814601095 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1020 91.03 0.441832429174201 0 noncoding 0 0 0 0 0.0472050932925017 0.75129210265699 0.0550864848716097 0.291227142043507 ACTCAAAAGCCTGTTGATGAAAGTGAAAGAGGAGAATGAAAAAGTTGGCTTAAAGTTCAACATTCAGAAAGCGAAGATCATGCCATCTGTCCCATCACTTCATGGCAAATAGATGGGGAAAAGTGGAAACAGTGACAGACTTTTTTTTTTTTTGGCTCCAAAATCACTGCAGATGGTGACTACAGCCATGAAATTAAAAGACGCTTTCTCCTTGGAAGGAAAGTTATGACCAACCTAGATAGCATATTCAAAAGCAGAGACATTACTTTGTCAACAAAGGTCTGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACTACCAAGAAAGCTGAGCACTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAGATCAGTCCTGGGCGTTCATTGGAAGGACTGATGTTGAAGCTGAAACTCCAGTACTTTGGCCACCTGATGAGAAGAGCTGACTCATTGGAAAAGACCCTGATGCTGGGAGGGATTGGAGGCGGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTAGATGGCATCACTGACTCTATGGACATGAGTCTGAGTGAACTCCGGGAGTTGGTGGTGGACAGGGAGGCCTGGCGTGCTGCAGTTCATGGGGTCGAAAAGAGTCAGACATGACTGAGTGATTGAACTGAACTGAACTGAACTGATCATTAATCTTAAGCAGCATATATCTGATCCATTGTAAAATGGCCAGAGGGCATGAAAAAGGGTGACGACTTAATCTAAGGATCAAGAAAAGCCATAGAATTGTTAAGCATCTTGACCTTTAAACTGATTGGTTAGAAATAGTGTATTTTAAGGACAGGAGCCAACCAAAAATGTACAGATTAAGTATATAAAAACTGTGATGAGTCCTGACTTTAGGGGACTCTTTACCTCTTCTCAGTGTCTATGCAGAGAACTTTGTGCTTTCCTTCTCTTTAATAAATCCTATTTGCTTGCTACCATGAGTGTTGGCGTGTTTATGAAGTCCATTCTTCAGCTCTGTGAACAAGAACTCAGAGTCCTGTTTCACTAGTAGCAGCCAGTGAGCACCTGAGAGCAGCCAACAGGCGCATGAATGACCTTGGGTGCACCTTCTTCAGCCCAAGTACAGCCACGACTTGACTGCAGCCCTGGATGATGGCTTGACTTGCGATCACCCGAGGGCTTCTCAGCTATAACCCCCAGCTGACCCACCTGGAATTGCTGACTCACAGAAATTGGAAGAAAGTAAATGTTTGTTTCTAAGCTGTACAAATTTAGGGGAATTTATTTTGTTGCAATAGATAACTAATACAGAGTGAAAAGGAGATAGATCTTTGAGATATTTAAAGTCTAAAAATGTATTTGTTCTATCCTTGCGCTTGTTTGGAAGCTTGGCTGGGTATGTAATTCTGGGGAAGAAATGAATTTTCCTTAGAATTTTGAAGGCTTTGCAGTTGCAGTTGAATAGTTATCAGACATCTTGATTCCTGATTCTTTTCAAATGTCCTTCTCTCCCACTCCAGAATCTCTATTCTGAAGTTTCATGATGATATTTCTTGGAATGGATCTCTTTTTATTTATTATACTGGG TCONS_00234763 TCONS_00234764 r 5' 21882 TCONS_00234763 TCONS_00234764 r 5' 21882 EMBV3_21954 GAGGACCAGCGGGCCCGGGCCCTCCAGAGTGGGAGGTGGCTGTGGGCCCGTGTTCCTCTG Variant GeneID:493720|FADD:NM_001007816:227_cdna 637^786 1 EMBV3_08668 GeneID:493720 29 GENE FADD MGC142515 Fas (TNFRSF6)-associated via death domain EMBV3_08785 CATCTTCCCATCCAGACAGCTGAGCTCGCTCCGGAAGCCCGAGGGCATGGATGGGCCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09080 CCGATCCACTGAAGGAAAAAGAGAAACAAGTGATGATCTGGGATGACCTGAAGAAGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06582 AGCCCCAGCCTCAAGGGTTTGACAACCAGGCTTTCCTCAACGACTCGGACGACGCCAACT Gene GeneID:100125282|CDHR5:NM_001103326:186_cdna Constitutive 0 NULL GeneID:100125282 29 GENE CDHR5 MGC159375 MUPCDH cadherin-related family member 5 EMBV3_25767 TGGTGTAGTTAAATTGAGCCATAACCATTGGTGGTCATGGGGACCGGTAATTAAGCCTGC Gene BVT0101_011212 + 0 NULL GK000010.2:42903065-42957494 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43341 ATGGCGGCAGCAGCATTTGTGGGGAAATGATAATGGAGGTTGATAGATGGCACCCAGTTC Gene GeneID:785693|LOC785693:XR_084041:41_cdna Constitutive 0 NULL GeneID:785693 23 PSEUDO LOC785693 NULL similar to CGI-107 protein EMBV3_16744 GACAAGGAAAACATGGCAACTCAAAATCTACAGGATGCAGCAAAAGCAGTTCTAAGAGGG Gene BVV0102_037508 + 0 NULL GK000019.2:47352663-47474734 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42452 AAGGCAGAGGCTTTGGCCATTGAGACGGAAGCCGAACTTGAGCGAGTAAAGAAAGTACGA Gene GeneID:516456|MVP:NM_001035317:341_cdna Constitutive 0 NULL GeneID:516456 25 GENE MVP MGC127407 major vault protein EMBV3_38186 GTCTGATACTAACCAAGTTGAGAGAAGCCCAAGCACTCATCCTTCACTTGAACGGGAGGG Gene GeneID:527162|TBC1D8:XM_002691148:175_cdna Constitutive 1 NULL GeneID:527162 11 GENE TBC1D8 NULL TBC1 domain family, member 8 (with GRAM domain) EMBV3_09628 AAACTGAAAATGGAGTTATCACATGATCCGACAATCCCACTCCTGGGCATATATCCGAAG Gene BVV0102_397241 - 1 EMBV3_05478 GK000001.2:113595080-114144238 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31449 AATGCAGTCACAAATCCACTCTTGGGGGAAAAATACAATAAAGGGGCGACAGCGAACACG Gene GeneID:537580|LOC537580:XM_002691017:354_cdna Constitutive 0 NULL GeneID:537580 10 GENE LOC537580 NULL similar to leucine rich repeat containing 9 EMBV3_18579 ACCTCCCGTACAGCTGCTGGTGCTGCCTCCCTCACCAGATGGATACAGAAAAATCCTGAT Gene GeneID:510399|MGC128008:NM_001034380:260_cdna UTR3_Alt 2 NULL GeneID:510399 3 GENE MGC128008 NULL hypothetical LOC510399 EMBV3_06205 AGATTCTGAGGACGAAGGAGAAGGCGGTCGTAGAAATGTGACTGATCATAAGAAAGGAGC Gene GeneID:407223|HDAC2:NM_001075146:4_cdna Constitutive 0 NULL GeneID:407223 9 GENE HDAC2 NULL histone deacetylase 2 EMBV3_36416 AAAGTGAGCGAATCAGCATTAGAACCCAGGCATAGGGATGTTTATCGCCTTGCGGTGGAG Gene BVT0102_145679 + 0 NULL GK000002.2:22081289-22120290 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43770 AGAGACCAACCAGTTGTAAAAGACCAAGAACCGAGAGGCGTTCATTGTCGCGGCATACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15268 ATCCCTTTGGTGAAACTCCAGAAGGACAAGTTAATGGTGCTGGACTCGCCATGGCTACCT Variant GeneID:537713|SUCLG2:NM_001034639:56_cdna 761^922 1 EMBV3_36188 GeneID:537713 22 GENE SUCLG2 MGC127366 succinate-CoA ligase, GDP-forming, beta subunit EMBV3_07289 AACCAGTATATGTTTCAAAAGTACATTATGCTGGACAGCACGAAGTTGTAGCTATAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40040 AGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAGCAGGTGTGTAACCCCATCATCA Gene GeneID:281825|HSPA1A:NM_174550:36_cdna Constitutive 0 NULL GeneID:281825 23 GENE HSPA1A HSP70-1 HSPA1 heat shock 70kDa protein 1A EMBV3_16286 CAAAAAATGACTTATCTTGATCACCATGCCCTCGTCAGAATAGCCTTCTTAAGTGCTTCC Gene BVT0101_002981 + 0 NULL GK000009.2:44204890-44242017 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40522 TGACTGTCTCAGAGGGGGCTCTCATGACCCTGAACTGCACTTACCAGGCCACATATTCAA Gene GeneID:786219|LOC786219:XM_002690624:11_cdna Constitutive 0 NULL GeneID:786219 10 GENE LOC786219 NULL similar to LOC784904 protein EMBV3_33224 CCGGGGGCCCGGGCCCCGGCCTGGCGGCAGGGACCAGCGCATCAGCCAGGACGTGGAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29580 TATGGTCTAACTCATTTGATAGATGGGGAAACGGCAGCTCAGAGGAGTGACGTGGCTTGC Gene BVV0102_261114 + 0 NULL GK000003.2:9442759-9453296 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42233 GCAAATTTTGATTTTCCACTCTAGAACCGGTATCTAGATCACCATGGCAACTGGACAGAA Variant GeneID:281093|CRYZ:NM_174025:2_cdna 52^347 3 EMBV3_33564 GeneID:281093 3 GENE CRYZ NULL crystallin, zeta (quinone reductase) EMBV3_13414 TTCCTTTACATGAGTGTTTGATAGAATGGACTGTTCTAGTATTTATTTTTATGATGTCTC Gene GeneID:613942|CHODL:NM_001101228:10_cdna Constitutive 2 NULL GeneID:613942 1 GENE CHODL NULL chondrolectin EMBV3_17597 CAACTCCCATCAGTGGTATATGAACTCTTGGCCTCACTTGAGTTGCAGGTGTGTGAGTCT Gene BVV0102_245771 + 0 NULL GK000023.2:35113751-35437307 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133298 TCONS_00135027 2 XLOC_081082 XLOC_081625 NonCoding TCONS_00135027 XLOC_081625 NonCoding NonCoding - 23:35370027-35374900 - TSS100549 1369 1 TCONS_00135027_1 86 0.397370343316289 2 0.719417077175698 0.00101672405254832 6.95623127423325e-11 0.000279925006841935 1.06539095824551e-11 2.2108526729601e-08 6.95920332792102e-05 1.38060660922881e-13 0.00065154431728405 1.31152115613784e-11 6.69246050122934e-13 0 3.30624138899677e-11 7.8406126286226e-16 3.49713685617113e-12 1.1231551305574e-05 0 0 0 2.84844261490767e-08 0.000468494410367335 6.3206015101439e-12 0 0 0 0.000564764853798987 0.00038637585118929 0.000419177137385642 0 0 0 XR_242319.1 LOC101927610 PREDICTED: Homo sapiens uncharacterized LOC101927610 (LOC101927610), misc_RNA. 1e-20 105 72.22 0.154857560262966 0 noncoding 0 0 0 1 -0.152294160618002 0.311167645325522 -0.0708030214187875 0.333526279540884 TGTTTTATGTATGCCAAATAATTTCATGTTATATTGTGGACATTTTGACTATGATGTTGTACCCTCTGGGTCTAGCTGAAACCCCACAGAGAATGATAATATTTTTGCTTTAGTGGCTATCAACTTTGTTGGGTTCAAGTCATATTTTGATCAGATTTCTTTGGGTTGTGGTCCCAATATCAGTTTGGTTTTAAAATCCTTTGCAGTGCTATTTAGATCTGTCCTTTAGGTCTTCCAGGCAGCCAGGTTATAGGATCTGGGTAATAGACTCTTCCATTGCCCCTCCTCAAAGTCTGTGTGTGTTTTTTAAAATTCAGACTCACACACCTGCAACTCAAGTGAGGCCAAGAGTTCATATACCACTGATGGGAGTTGCTTTCTTAAATTCTCTCTCTGCTGTCTCTGTGGTACATTCTGGTTCCTTCAGATTCCATTTTTTTGCAGTCTTCAGGTCAGAAAGACCTCCTGCCTTAAGACATCCTGCTCAGCTGCCTGTTTTCCTTGACTCCACCCACATCAAGGTCAAGAGGGCAGGAGAGAAGAAAGTGGTGGGGAAGGGGGGACCTGAGAAAAAGGAAGTGAGTAGGTTCCTTCCAGAAAGTAACAAGAAGTCTCGGGATGAGTGAGCCACTGCCAGCCAGTGGCAGGTCTCGCAAGCCCCACCTCCCCTCTCATCTCTCGGGAACTCAGCTGATTGAAGAAAACCACCTGTTCCTAGGCCACTGACTTTCACTGTAATCAAGACATAATTCAGTCAGGAGAAGTATCTCTTTGTTGGTTTTGGTGAGCGCCCTCGGAATTTGTGGTGTAACCAAACATGAGCAAACTTCAGCTGAAATCAATGCCAAGAGCAGAGCAAAGGCATATTAGTAGTTGGTTTTCGTTTTTCTTTTATTACCGTATGTATCTCTATTGATATTTGAGCTACTGCTTCATATTATGTAGCTATATAAAGAAGGTATTTTTTTCCTTTCATTTTGGAATTTCAGCTTATTTGCCAAGAAGAGCTTTTAAAGGATGATGTTTCAGTGGTAACAGAAACTTTCAAAAGGGATTCGAGGGAGAAATCAGCTGTCTGAACATACCAGGGCATGATCTAGGCTTGGGCAGTTGGATGTTGAAGCTTCAAAATTTGACTCTGGAGCAGACAATTCAGAGAGAAAGATTGAAGAGCCATTCATAGCTCTCGCATGTTCAGTAAGGGTGCAGTGTCCAGCTTCATTAGTGTTCTAAGGTAACCAAGGCAACACCTCAACTGGACATTTCTGCTAAAAAGCAAATGTTTTTCTCCTTGCCTTCACCAAATTCCCTTACTTTTGGTTTATTTCCTAAGCCTGATTTTTCATTGTCCACAGGTTCTGTGAATCCA TCONS_00135026 s 3' 25529 TCONS_00135026 s 3' 21438 EMBV3_05140 AGTCTTCGGTCAAAAAGCACATCTTCGACTTCACTGGAGAGTTCATGCTGGAGAGAGACC Gene GeneID:100299799|LOC100299799:XR_083940:172_cdna Constitutive 0 NULL GeneID:100299799 18 PSEUDO LOC100299799 NULL similar to zinc finger protein 208 EMBV3_28604 TCACTAATGAGGATGTGGACCTGGACCTGGCAGGTGCGGAGAGGACAGATATAATCTAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18666 GGAGCAAACACTGCTTTAAAAAGAACTCCTCCCATCCTCTCCAAACACAGCCTAAAGCTG Gene BVV0102_253868 + 0 NULL GK000006.2:71280633-71373512 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06112 CCATGCAAGGCTCCTCGGAGAAGATCCTGAACAGCCTCAATACATTATTCCCAAATGGGG Gene GeneID:510238|PPM1M:XM_002697066:568_cdna Constitutive 1 NULL GeneID:510238 22 GENE PPM1M NULL protein phosphatase 1M (PP2C domain containing) EMBV3_11049 CTGATTGTAGGGTGTCTGAGAGGACAAGTGTATATGCCCAGAGGCACCCTCTCAAAACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19641 AAGATAACATGGAGCTGTGTAAAAAACTAATTACTGCCTGTAAGTGTGTCATGGAGGCAG Gene GeneID:525659|GCLM:NM_001038143:156_cdna Constitutive 0 NULL GeneID:525659 3 GENE GCLM MGC134086 glutamate-cysteine ligase, modifier subunit EMBV3_12406 TTCTAAAGCGCATTTTCAAGCGACAGAAGCCTCACCTTCGTTTGGAGACGAGTAGCGACC Gene GeneID:615206|LOC615206:XR_084081:134_cdna Constitutive 0 NULL GeneID:615206 26 PSEUDO LOC615206 NULL similar to C6orf173 protein EMBV3_13882 ATCATCGGTCTTTTTGGCGTCAGGGCCAGCAGCATACAGCAGCACCGGAAAAGCACATTT Gene GeneID:524431|LOC524431:XM_002693959:148_cdna Constitutive 0 NULL GeneID:524431 16 GENE LOC524431 NULL similar to hCG1985805 EMBV3_43515 GTGCTCGCTGAATTTAGTAATGCTCTTTCAACGTCTTGCGTTAACTCACTACCACGTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42910 CCTGGCGGTCCGGAGGCAACAATAAGAAAGTGAAAGAGATAGAAAGAGGCTGATACTCCC Gene BVV0102_007405 + 0 NULL GK000030.2:100906003-101028238 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11110 CACTCGTAGTGAGTTTCCTTGAATGGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCC Gene GeneID:781497|NPAS4:XM_002699355:249_cdna Constitutive 0 NULL GeneID:781497 29 GENE NPAS4 NULL neuronal PAS domain protein 4 EMBV3_16491 CGGAGGCCTCAAAAAGTGTAAAATCTCCAGGTCCTGATGAAGTTGTAGGGCCAGAAGGAA Variant GeneID:508759|DCUN1D5:NM_001046012:8_cdna 385^476 3 EMBV3_03616 GeneID:508759 15 GENE DCUN1D5 MGC137775 DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) EMBV3_17424 AAAAAGCCTAAAGCCAAGCAAGCCCGAATTCTTCTCCTGGGACTTGACTCTGCTGGGAAG Gene GeneID:539937|ARL14:XM_002684953:213_cdna Constitutive 0 NULL GeneID:539937 1 GENE ARL14 NULL ADP-ribosylation factor-like 14 EMBV3_08129 CTTGGGCACACCTTTGGCTTCAAATAGCTCTACCAGTTACCTTTGACCTTGACCTGGAGG Gene BVV0102_057278 + 0 NULL GK000018.2:11760941-11788218 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085435 TCONS_00085434 1 XLOC_051870 Coding TCONS_00085435 XLOC_051870 Coding Coding COX4NB 18:11785108-11799986 j TSS63806 4128 1 TCONS_00085435_1 159 0.0910852713178295 4 0.722793573973247 0.000413261001526958 8.93605440262132e-05 0.000227404574342696 0.000171647165363298 1.74603829170501e-05 1.84774929100379e-06 0.000163482274727238 8.72933147559915e-07 0.000229964046852772 7.83354792429646e-05 1.32397390872944e-05 7.40807643091789e-13 1.59563163515353e-08 8.55043687658099e-05 0.000165724560286963 0.000343102527198728 0.000121162433768473 0.000538239947826318 0.000738670916122619 0.000368842259686308 0.000139903225086051 0.000172951224275723 0.00024500465652487 0.000267196419022061 8.36696715717396e-05 0.000256473812555186 2.98038741245926e-05 2.165234112122e-05 1.41709476090528e-07 2.13893865687747e-05 XR_238273.1 EMC8 PREDICTED: Bos taurus COX4 neighbor (EMC8), transcript variant X1, 0.0 1094 100.00 0.14656007751938 NM_006067.4 EMC8 Homo sapiens ER membrane protein complex subunit 8 (EMC8), 0.0 746 90.93 0.131540697674419 TCONS_00085435_1 sp|O43402|EMC8_HUMAN EMC8_HUMAN ER membrane protein complex subunit 8; 6e-106 306 75.24 0.993710691823899 1 coding AAGCGCCAGTGGAGTCTTAAGGTGGCCGCGTCGGCCTCTCCCGGATGGTTAGCCGGCGTCTGAGGAGCGGAGCTCGAGCGGGTCTGGGCCCGTGAGGGGCCCTCGCCAGCCGCGGGGCCGCGCCAGGGAGCCGCCGCCTCGTCCTCCTTCTCCCCTGAGGCGCCGCGCGGCCAGGCAGCGGATCCAGGCCTCGGCCGGCGCCGGGCCTCCGGGGCCCTCCCGGGCTCAGCATGCCCGGGGTGAAGCTGACCACCCAGGCCTACTGCAAGATGGTGCTGCACGGCGCGAAGTACCCGCACTGCGCCGTCAACGGACTGCTCGTGGCCGAGAAGCAGAAGCCACGCAAGGAGCACCTGCCCCTGGGCGGCCCGGGCGCCCACCACACCCTCTTCGTGGACTGTATCCCCCTCTTCCACGGCACCCTGGCCCTCGCCCCCATGCTGGAGGTGGCCCTCACCTTGATTGATTCGTGGTGCAAAGATAATAGCTACGTGATTGCTGGTTATTATCAAGCTAATGAACGAGTAAAGGATGCCAGTCCAAACCAGGTAGCAGAAAAGGTGGCCTCCAGAATCGCCGAGGGCTTCAGTGACACGGCTCTCATCAGCCGGTCCTACGAAACACTCGTGGATTTTGATAACCACCTGGATGACATTCGGAATGACTGGACAAATCCAGAGATCAATAAAGCTGTTCTGCACTTGTGTTAGGGAGGGGTTTCAATGACTGGTCTCTGGGCGTTTCCACTACACTGAAGAAGAGAAGTTATTTTTAAATGTAAATAAAATATCACAGTCGGTGTGGAAAGCTGACAGTTTTCAGAAGTGGCGTGTGCCTTGAGAGAGGGCAGAATGTCCATCAGTCACCTGTCTAATGCAAAGTCTCTAGACCAGGTACAGACCATCCCATCCGACCACCCTGTGGAGCCTTCCCAGTTGTACATGGCTATAGTTCTTCAAATCAAAGCTATTTCTGCTTGTCCAAGATTGTTCCTATTAAACAATTTTAACTAACCTTTTATAATCTGGAGAGAATACTTTTTAAAGCATATGAACTGTCTTTAAAAAAAAAAAAAAAGCCCAGATCTTATACCCAAAATAGAGTGTTTGTGAGTTTTCATCCTGTTTGAGTTAATATCGTCCAGCCTGGGGATCAGGCCTGTGCCTGGTGTGCCGGTGCCAAGCTGTGTCTGAGAGCCGAATGCTGGTGTGCACAGCCAGGAGGCTCCCCTAGCTGCCACGCCTCTTCACATGGGAATAATGCTGCTGGTGCCTGGGAAACCTTCATCGTCAAAGGGTAAAAACAAACACGTTGGGAAGGCAGCTTGAGTGGGAGCCCTGTATGATGCTCCTCAAGCAGACAGATGGGAAACCCACGGAACTGAAGAAAAAGGGGATCGGTGTGCTAAGATTGTCTTAAACAGGCAAGAGTCGGTCCTGACTCGACTGGCTTGCATGATTACCCGAATGGCTCTAATTTATTTCTTCACAACAATTATTTCTTTTCGTATATGAAGCCACACGAGCTGAACAAAACATAGGCTCCTGGAGTTTTACAGCGCCCAGTCTGTAATCGTTAACACTTGAAACAGTTAAGCTTTTTAACCCCATTGTAGGAAATTGATGGGGAAAGGACTCCATCGCGTTTATTCTTTTTCATACGAATTATTCCATGCAGAGTGCAGAGACCTGTACCTTTGCCGCTGTCATTTTTTGGACCATGTGAAGGAAGTCTGTGACAATTGGGTTATCTGTTGAAAAGGCTTATGATGCAGCATTTCACTGTTTTATCAAGTAGGAAACCTTCCAGCATTGCTTACAATAGACATGCTTCCTTTAGTCCACCAGATTCTCTCTCCTTCCTTCAAATCCAGCTCACCCTTGGCTTTGTAAGGTGACCGTATGTCGTGTGGGGAACACAAATGAAGGGCTGGCATACCGATGCACTACACCTTCTCGTCGCCTCAGAGGCTGCAACCAGCACAGGTGGAGTGCAGCAGGCAGTCTTGTTCCAGATGGGTCTGTATTTTATTTTGGAAAGGAGAAGAGTCCGTCTCTAGCATTTGCCACAGAAAAGGCTGTCTTTTCCTGAAATTAGAATGAGCATGTGCTACCTCCAGGTCAAGGTCAAAGGTAACTGGTAGAGCTATTTGAAGCCAAAGGTGTGGCCAAGTCTAGTTTGGAAGCATTGCACAGATGGTCTTATTGTCCCACATTTTTACCTCTGTGAAGAAACAAAAACAAATTTCCAAAGTGCAGACGATTGCTTCTGGATGCTTGTGAAAACAGCAAAGCCCCTGGGCCCTGTGCCGGGCTCCCCTCTGTCTTCTCTCCAGGCCTGGCTGTGTGGCCTCTGAGCCTCCAGTCTCCCAGCCCTTAGAACAGTCGTTACCCACCCAGGATGAGAGTAGGAGCCCATCAGAAAGCCACTGAAATGGAATCATACTGTGATTTCCCTAGAAAAGATTTAGAGAAGCAACACAAATTATATTGTGTATTGAAGAGATTCTTGTCAGTCAGAACGTTCCTAAATGAGTCCTGCTTTGGTTCGAAGGGGCTGGAGGGGAAGGGGTGGGGAATGTGTAGAGACATCCCCTTAGAACCAGCCATATGCTTAAAATTCTGGTGGACGTTTTTCTCTGTTCATACATCCATCCATCATGAAGAGAGTGGGACAAATGAATTACCGGTTTGCCTAAAAATGCCATCCAAATCTAATGGTTGCTTTTAAGAATTGAAAAATACTGAATGTGAAAAGGTAGGCTGTGACTTCCTAAATGACAAAAAGCAAGGTGCACACTAAGGAAAAATTGGCTTAAGCTTTCCAGGGATCTGGTATTTTTAAGCTTCCTCAGTGTGAAAAGTTCCATATAGTTAGCTTTGACTCAGTGGCTTATTTTTCTGATTGATGTGCTTGCAAAACTGTTGTTCCCTCTTAGAGTAATTTTCAGCTTTTCTGACTTACCGTCTTTGTTTTGCCTTCAAAAGAAAAATATTGGCTTCCCAAACTGCCCCTTTTTAGTATTATATTTATCTTAACAAAGTAGCTACTTTATAACATCCTGGTAAGTGAAAGCAAGAAAAAGAGCCATGGGCATTAATCTCCATACCCTGCAGACATTTTTAGCAATTTTAATGAAGAGAACTGAATTTAAAAATAGACTTTGATTTTACTAATTGACATTTCTTTAGCCTTTCCATCAACTCAGTGCCTCTTAAGCACTGGATTCTTTTCTTCAATTCAGTAGAAAGCCTGGCGGCAAAGACTGGTTTGTGTTCCCCCTGCCAGCTTTCAGATAAAGTGAAAGTCTCTTGGCTCTGTCCAACTTTGTGACCCCATGGACTGTAGCCCACCAGGCTCCTCTGTTCATGGAACTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTCCCTTCTCCAGGGGATCTTCCCGGCCCAGGAATCGAACCGGGGTCTCCTGCATTGCAGGCCGATTCTTTACCAGCTGAGCCACCAGGGACGCCTTTAGCTGTCGGATAGGTGGTATGTTAATCTGACTGTGTTCCCGGACACCTCAGAATCGGCGGGGGGCGCGGGGCGGGTAACAGATATTTGTATTCTCATAATGTTGACTTGTTACTACTTAAAATGTTTAAGATCTTGAATAGGATGCAAAATCTGATCAAGTTTTGCCTTTCTCTGAGATGAATCCCCATTCTTCTAAGGAGCTTTTCTTTCCCCTTAAAGATTAACTCCTTGGGATCGAGTCCAGCTTTAGAACTGCCAAAAGCTGCGTTCTCCTTGGTCTTTTGCTTCCACAGTAGTGCGTCAGGTGCCAGCGTGGAGGAAACCTTTGGCTTGAACTTGCATTGCCATATAAAGCAGAGTAGCATCCTATATTTAGTGCTGTCTGAAAAAAAGTTCCAGATCCCATCAGGAAGGCCATGGTAAATAATCACATTTCAGGATACAGGCACACCTCGGAGATATTCTGCGTTTGGATTCAGATCACTGAAATACAGCAGTGGAGTGAGTCACAGGAATGTTTTGGTTTCCTGGTACGTAGAACAGTTATGCTTACACTATACTGTAGTCTGTTAAGTGTGCAACAGCACTGTGTCTGAGGAAACAGTATGCATACCTTAATTTC EMBV3_04486 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24535 TGTGGAAAGGAAGGCAGAATCAAGTACAAGAATGTGAGGAAATCATCAGGAATGGAGGTG Variant GeneID:510522|FGB:NM_001142917:20_cdna 612^839 3 EMBV3_36974 GeneID:510522 17 GENE FGB NULL fibrinogen beta chain EMBV3_09012 CAAAAAGAAAGCCCTGGCCACATGCAGCTCCCACCTCTCCATGGTCATCCTCTTCTACAT Gene GeneID:786846|LOC786846:XM_002697403:85_cdna Constitutive 0 NULL GeneID:786846 23 GENE LOC786846 NULL similar to olfactory receptor 108 EMBV3_19953 CCTAGAACCTGCTATGCCTTGCTGTTGGTTCTGTGGCTCGGCGGCTTTGTTCATTCCATT Gene GeneID:510676|LOC510676:XM_002690681:278_cdna Constitutive 0 NULL GeneID:510676 10 GENE LOC510676 NULL similar to olfactory receptor 732 EMBV3_26196 GCACGGGTAACAGATGGACTCCAAGGTCTAATAACCCTTTGTACTTCAGCTAAGGCTGAC Gene BVT0102_021915 + 0 NULL GK000017.2:30404703-32220237 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076947 1 XLOC_046943 NonCoding TCONS_00076947 XLOC_046943 NonCoding NonCoding - 17:30547618-30552957 - TSS57645 802 1 TCONS_00076947_1 38 2 0.85013113525665 0.00130628211328761 0.00146591880372523 0.000369236737173021 0.000569486641087233 0.00200689018263007 0.000178407104043823 0.00066170285621401 0.00393085869009922 0.000969050586593042 0 2.85430605150766e-06 4.01259624334979e-05 0.000851481725186964 7.62492391451602e-05 4.8939610750148e-05 6.58643362903643e-05 0 0 0.0010640159092223 0.000963938703086718 0.000276319751426513 0 1.14389654488705e-05 0 0.00057017358982551 0.000702790480428659 0.000694038944182197 0 6.05311040872172e-06 0 XR_228261.1 LOC101903780 PREDICTED: Bos taurus uncharacterized LOC101903780 (LOC101903780), 9e-70 268 100.00 0.183291770573566 0 noncoding 0 0 0 0 0.0374141008591287 0.721401709877939 0.0291071328737159 0.581552893838802 TTTTCTCTTTTTTTAAGGAAAAACCTAGCATCTAGTTGTTGAAGACTTTACAAGACTGTTCCTCATTTAAGCCAAGTCCACTTAATAAGTCCTGGAAAATGTTCTACTCAAGGCAGCAAGTACACACAGAGCCCAAATGAACTATAATTAAAGTGGCAAGAGACCAAGGAAAAGAGCAGTGTTAGTTCAATTGTTTCCTTTGCACGGGTAACAGATGGACTCCAAGGTCTAATAACCCTTTGTACTTCAGCTAAGGCTGACAATGCGTCATTATACTCAGATGGAAGCAAGAAGAAGGTGCCTAGCAACTTGGGCTTGGAATGCCTAGGCTTTTGTCAATTTACATCATAATCTTAATATTAAACAGGCTTGCTCTCATTTGCCAGTCATCACCTCATTTTATGTTTTTCAAACACAAGAAGATTAGTCTTTCTTGAAAGTACTTTAGCCCCTTAGATACAGAACAGTAGTAGTATTTTAGAGTCTCCCCTTATAAATGTGTACATAAAACTGCCATGATCCTTGATGGAAATTATATCAGTAAGTTGGGGGGCCTACCATGGGTAATATTTTCATTAGCAACAGTATGCACATAACCCAGGCTCTTTTTGGAATTCAGTAGGATACCAAGGACTATTTTTGGGGCCTCATTACTCTTGTATTCTTGTACTTTATGTATATAAGAAGTCATTAGAATGTCTATTTAATTTTATATTCTCCTTTTTAAGCTCTGTTTGTCTATATTTTATGCTGCAAATAAAATGTGTGTGTGTTGGGTTGTGTGCTCAAGCATTTCAGATGA TCONS_00076942 s 5' 142824 TCONS_00076942 s 5' 143536 EMBV3_06737 TTGGTTCCAGAACCGAAGAGCCAAATGGAGGAAAACGGAGAGAGGGGCCTCTGACCAGGA Gene GeneID:521995|DRGX:XM_002698969:121_cdna Constitutive 0 NULL GeneID:521995 28 GENE DRGX NULL dorsal root ganglia homeobox EMBV3_21037 CTTCTACCTCCTATTCCCTCTATAATCCAACCAAAGGCAGATAGGATATGATTGGGGAAA Gene BVT0101_026630 + 0 NULL GK000030.2:84860776-84901861 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252331 1 XLOC_155272 NonCoding TCONS_00252331 XLOC_155272 NonCoding NonCoding - X:84868294-84873493 - TSS189552 5199 1 TCONS_00252331_10 187 0.410463550682824 1 0 0.000107296387408289 7.14301351166213e-05 0.000128354617997092 0 5.7928020744686e-05 2.0640854190559e-06 2.01905843149805e-05 1.13766447494536e-06 2.42819309160154e-05 0 1.467708195981e-07 2.29254738178455e-07 1.83963678545534e-07 6.78591619353432e-07 0 0.000426730627138083 4.15135405445058e-05 0.00111483155526314 0.000151721866833412 0.000177053814532289 1.16781475086293e-06 0.000427483391759194 8.99935088941011e-05 0.000471865157214196 0.000265199517202386 4.13323950535746e-05 3.54997915418504e-05 3.14075820494423e-05 1.8778927355036e-05 3.46926589695529e-06 XM_005193762.1 ANGEL1 PREDICTED: Bos taurus angel homolog 1 (Drosophila) (ANGEL1), 0.0 1348 81.03 0.264858626658973 NM_015305.3 ANGEL1 Homo sapiens angel homolog 1 (Drosophila) (ANGEL1), mRNA. 0.0 726 70.95 0.25312560107713 0 noncoding 0 0 0 0 -0.0484855011455127 0.744423421920507 0.00181400034027325 0.972924863695562 GGCCACCTGATGCGAAGAGCTGACTCATTTGAAGAGACCCTGACGCTGGGAAAGATTGAGGGCAGGAGAAGGGGACGAGAGAGGATGAGATGGTTGGATGGCATCACCGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTCGGACATGACTGAGCGACTGAACTGAACTGGTGTGAGCCCTTCCAGAAATTGCCATTAGCCCAACCAACCAGTGGGAACACAGCCTTACTCATCAGCAGACAAGTGGCTTAAAATCTGTGTCATGTCTGCATCCTCTCAGGGTGGAACTGCTATGTGCCATCTTGCCTGTCTCTGACTAGCCTGCTTTCCACACTGGGGCTGTTGGCCTTGGGGCCAGTGGAGGGCGTAACCAGGTCCTTTTATCCTCTGTGTTTCATTAGGCATTCATCTGGCCAACCAGGGGATCCTCTTCATCCGGGCTCTGGAACAAGTGGTTGCCACAACCTGGAGTGGCAGACTAAGGGGTACATTTGCTGTCTTAGCAGCCTCTGAGCCTCCTTCCCAGAGCTCCCCACAGGCCTGTGTGTTTCCCCTAGGGCTTGTCCCTTTCCCCAGGCTGCCCTGTCGGGGGATCAGTGGGCAGAGATAGTGGTTCAAGGTTCAAAGCTCTTTAAGGCTGAGGAGAAAGAGCTGTCAGGAAACTCTGGTCTCACTGGAGGGCTGGGGTGAGGGTGGGAGTCCCAGCGGGGGGAGAGCAGGCAGCAGCCTCAGCTAGGACTCAAGACCTCAGGAACTTGCTCCCTTTCCTCACACACCTAAGCTGCAACTCTCTGCTCCTCTCCTCCCACTGCTTTTTACTTTTTGCTATGTCCCCCATTCCCTTCCCTTTTTTTTGTTTCCCTAGAAAAGCTTGATATTTAGCTCAGGCCAAACCTTCTCAGTAGAAAGGCAGCCTTGGGCAAAAGTGGCCCGAGACCTGGAGGTGGTGGTGCTTGAGGGTTTGCTCCAGCTGGCAAGGCCTCGGCTGCTCATTGCCTCTGCTTTCCCTTGCCTGGTACGGCGGGGCACTCTGGCCCATTCAGGGGGCTCTCTTGCCCACACGAGTCACCTGCAGGCTTTAATCTTTCATTGCTGGATTTGGCGTGGGGTGTTCCTGGCTGGCTCCTCCTCACACCTCCCATCATTCAGAGTAGCTGTTGGCCCTGCAGATGTGACCCCCAGAATGGGACTGGAGGATATAGCTGAGAGGCTAAAGTTAGGGACAGTTAGCTGAGGTTCACGTTTTCTCCCCACCCCCACCCCCCCTTTTTTTTTTTTTTTTTGAGAGCCAAAGGCCAAGCTTGAATTCTGCTGCTGTATTCATGGTTATAAGCTTTCCATGCCTAGGTTCTGGGGAATTTATCTATGCATGTATATTTGTAAACATTGTTTCTTGGGTACTGGGCATGTGCCTGTCTGAGCCCCAGGCCCATCTGTCCACACCCCACCATCCACTCTGTCTCTTTCTTGGTTCCTAGAACCTAGAACTAGAGCCCATCATCAGCTGTTCTCTTCTGTAAGGAAATATAGTTTAAAAATGGCTAAAGATGACAGAGAGCAGGAGCTTGATAGATACAATCTTTTCCTTGTTTTCTTATTTGTTTCTGTTTTGGAAATGAAAGGGGGATTTAAATGGTCATTTGAATTCTCTTTTCCAAATAAAGGTTTACCTTCCCCCCCCCCCAAAAAAAATTTTTTTGATTCCAGCTTGATTTCATCTTGTGCTTCATCCAGCCTGGCATTTCGAATGATGTACTCTGCATGGAATTTAAATAAGCAGGGTGACAATATACAGCCTTGACATACTCCTTTCCCAATTTTGAACCAGTCTGTTGTTCCATGTCTGATTCTAACTGTTGCTTCTTGACCTGCATACATGTTTCTCAGAAGGCTGGTAAGGAGATCTGGTATTTCCATCTCTTTAAGAATTGTCCACAGTTTGTTGTGATCTACACAGTCAAAGACTTTAGCATAGTTAATGAAGCAGAAGTAGATGCTTTTCTGGAATTCTCTAACTTTTTCTATGATCCAACAGATGTTGGCAGTTTGATAACCTTTCCATAATAATTTCCCAATCATATCCTATCTGCCTTTGGTTGGATTATAGAGGGAATAGGAGGTAGAAGGGAGAAGCTCATAAAAGAAGCTAAGGAATGGGAAGAGACACAGGAGGAAAACTTGGAGGGTGAGGTGTCATGAAAACCAAGGGAATAGAGTATTGTTGGAAAGAAGAAAGGAAGGAGTACATTTAATACTGTATTAAATGCTGCTGAGAGACCAAAGTAAGATGAGGACTGAAAGGCATCTGTGAGATTTAGTGACCTTTGAAATGGCAATTTCTGTGGAGTGATGGGAAGCGGGAAGAACATTGAGTACATAACTCATTTAAGAATTTTCAGGGACTTGCCCAATGGTTCTGATTCCACTCCTTCACTGCAAGTGGCACGGGTTCCATCCCTGGTCAGGAAACTTAAGATCATGCATGCCACATGGTATGGCCAAAATTTTATTAAAATTAATAAAGTTTTAAAAATTATATAAAAAATAATTTTCAATTTTTTTATTTTATAAATTTTTTATTGGAGTGTAGTTGATTTACAGTATCATGTAAGTTTCAGGTATATAGCACAGCCACTCAGTTAGTACGTATATGTGTGTGTTAGTTGCTCAGTCGTGTCTGACTCTTTACGACCCCATGGATTGGGGCCCGCCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAATACTGAAGTGGGTTGCTATTCCCTTCTCCAGGGGATCTTTCTGACCCAGTGATTGAACCCAGGTCTCCCGCATTGCAGGCAAACTCTTTACCATGTGAGCCACTAGAGAAGACATACATATATACAAATATATTCTTTTTCAGATTCCTTTCCTTTATAGATTATTGCATAATGTTGAATATAGTTCCCTGTGCTGTATAGTAGGTCCTTGTTGGTTGTTAAAACTTATAGTTTATGTCTCCATTTTTTTTATCATTATAAGAAATTGAACACACAATATGCTGTTGTGCCATATTCTTTTAGGCCATTTCACTCATACAATTTGAAATTAATATTTAATAACTGTATGTTTTATATGGCTTGTGCATGCAGATATTCTAATTGTTGAGTTACATATATTAATTTTTTTAGTTTCTTGTTTACTTATTTCTGGCTTCATTTATCTTCTTTTACTATTTATGCACTATTGCCCTGCATTTAAATCTGAAATTAAATCAAGAAAATACAGCTACCACCATAAAATCACTGGTACCACTATGTAACGCCTGTATTGTTTTCTAATGACAAGAGAAAATTCTTTGTATATAAGAAGTGTGTATATCCATTATCAGTCACATGTGGATCCCATTTGTATATTTGAGTACTTGAAAAATACATAGAACTCGCAAGCTTTTGAGCCTGGAAATTTTATTTTAAGCTTTTATGTATAATTTATGTCTGTTTCCTCATAGTCTCATCCATTTTAAGTGTAACAGTTCTCCTGAATTTCTCAGCAAATCTTTTCCTAAGGTGAAGCTAGGATCTAACATTGTACTTCATTAGCACATGCCCTTTCTCACTTTAATATCATCAGGAGTCCCTATTATCTGAACACAGGAGGGTATACATCAGTGTCAGTCTTGAAATTTGAAATGTTTTGTTGAAATGTCAACTCTGTTTGCATAGACCTTAGCCATGCTTTTTACACCCTCAGTTTTCAGAGGAAAGAGGTAAACCATTCAGCAGTTCTGCCAACTTCTCCCTGTTGTTCTGCCAACAAGAATTCGTTGACTTATACTTTTCTTTTCAACTTACAAATCAATTTTGTTTCTCTTAAGTCACTTTCTTATTTCGCTCCTTCAATTTACTATAAATTCTTCTTTTTGACCAATATCCCCCCATAGACTTTTCCTATTAATAATATTGAAGAAAGTGGTGTCTTATGTATTTGTTTCTCTAATCTGATAGTTTTTGATACTCTTTTTTTTTTATAACTTGATGAACAGTACTACTTTGCCATCGTTATTTATGAGTAGTAGTAAATATGTAAATGTTATTTTAAAAAATTCTTTTAGGAATATTATGAGTCCAAAAGCTTCCCAAGCACTTCCTGTTTCCCTTCCCACATTGTACATGCACATAAATAAAGCTAGGAGATATTTGATGTATTGAGAAAACATTTATGGTTGTTATAAAATGAACTTGGCATCATGCATTTTCCTTCATCCTGCCAGTTAAAAGTCCTCTTTAAAACTCTTTTTTAATCAGGAAATTGTGGAAAAGTATCAGTTCAGTTCAGTCCCTCAGTCATGTCCGACTCTTTGTGATCCCATGGACTGCAGCATGCCAGGCCTCCCTGTCCATCATCAACTTCTGGAGCTTGATCAAACTTGTGTCCATCGAGTCAGTGATGCCATCTAATCATCTTATCCCCTGTCGTCCCCTTTTCCTGCCTTCAGTCTTTCTCAGCATCAGGGTCTTTTCCAATGAGTCAGTTCTTCACATCAAGTGGCCAAAGTATTGGAGCTTAAGCTTCAGCATCAGTCCTCCCAATGAATATTCAGGACTGATTTCCTTTAGGATTGACTGGTTTGATCTCCTTGCAGTCCAAGGGACTCCCAAGAGTTTTCTCCAACACTGCAGTTCAAAAGCATCATTTTTTCATTGCTCAGCTTTCTTTATGGTCCAACTCTCACATCCATTTATGACTACTGGAAAAACCATAGCTTTGACTGGACGGACCTTTGCTGGCAAAGTGATGTCTCTGCTTTTTAATATGCTATCTAGGTTGGTCATAGCTTTTCTTCCAAGGAGCAAGCATCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAAGAAAATAAAGTCTCTTACTGTTTCCATTGTTTCCCCATCTATTTGCCTTGAAGTAATGGAACTGGATGCCATGATCTTAGTTTTTGTGAATGTTGAGTTTTAAGCCAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTCTTTAGTTCTTTGCTTTCTGCCATAAGGGTGGTGTCATCCGAATATCTGAGGTTGTTGATATTTCTCCCGGCAATCTTGATTCCAGCTTGTGCTTCATCCAGCCTAGCATTTCTCATGATGTACTCTGCATAGAAGTTAAATAAGCAGGGTGACAATATATAGCCTTAACGT TCONS_00244880 . 3' 57 TCONS_00244880 . 3' 5255 EMBV3_36729 TCTCAGAAAGACTAGGTGGAACCCTGGGAAAAGGGGACTTGGGAGCTAAACCTATTGACC Gene BVT0102_259326 + 1 EMBV3_23749 GK000011.2:9646850-9683452 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19366 TGCTGCTCACCAGCCACCGGCACCAGTTCCACGAGGAGATGATCGGTTACTACCTGACCA Gene GeneID:789946|OTUD7A:XM_002696625:153_cdna Constitutive 0 NULL GeneID:789946 21 GENE OTUD7A NULL OTU domain containing 7A EMBV3_24480 CAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGG Gene BVT0102_061141 - 0 NULL GK000009.2:59268735-60278079 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00241430 TCONS_00197074 TCONS_00137160 TCONS_00251614 TCONS_00201377 TCONS_00034471 TCONS_00143669 TCONS_00060246 TCONS_00203551 TCONS_00060247 TCONS_00254911 11 XLOC_006328 XLOC_148094 XLOC_118739 XLOC_083370 XLOC_154555 XLOC_123023 XLOC_020687 XLOC_088090 XLOC_036632 XLOC_124202 XLOC_157843 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_29195 CTGTGCATAACCATTCACCAAATACTGCTGCTCTGGTTTCATGAAGGAATCGGTCTGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05435 CTTGGATTTGGAACCTATGCACCTCCAGAGCCAGGGGAGGAATTATTTCCAAAAGATGAA Variant GeneID:538060|LOC538060:XM_002684759:245_cdna 310^594 2 EMBV3_17938 GeneID:538060 1 GENE LOC538060 NULL similar to Aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) EMBV3_41898 GGGCTCAAGGAGTGAGGGCAGCAAACCTAACTCTCCCCAATGTACAATTGCTCTTGTGTT Gene BVT0102_012117 + 0 NULL GK000030.2:87083092-87205697 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247521 TCONS_00247517 TCONS_00247523 TCONS_00247525 TCONS_00247518 TCONS_00247524 TCONS_00247516 TCONS_00247520 TCONS_00247519 1 XLOC_151348 Coding TCONS_00247524 XLOC_151348 Coding Coding YIPF6 X:87204191-87231384 j TSS185340 3387 1 TCONS_00247524_2 236 0.158547387068202 8 0.875735510444248 1.95307529891861e-51 5.63005519813707e-05 0.000324990797332524 4.11497268049785e-05 0.000167309240181636 2.97728222132072e-59 8.92457246401603e-32 8.06494119704603e-10 6.80605761271115e-16 5.97994891801094e-05 3.15946705520774e-10 0.000195022614277224 7.77951952925097e-54 0.000130266715984217 2.73365015762185e-05 0.0049963471435179 8.76461142087037e-05 0.00273048168529813 1.28907504237588e-47 0.000998315630297137 0.000185329234974723 0.00155373212297501 0.00219926635125726 0.00049366427270098 6.06201349664054e-12 1.21734697675487e-09 1.96103348124394e-34 1.16461419064822e-51 4.15525524763941e-10 4.16505518157871e-07 NM_001101206.1 YIPF6 Bos taurus Yip1 domain family, member 6 (YIPF6), mRNA. 0.0 1595 100.00 0.260702686743431 NM_173834.3 YIPF6 Homo sapiens Yip1 domain family, member 6 (YIPF6), transcript 0.0 1342 87.67 0.314732801889578 TCONS_00247524_2 sp|A6QLC6|YIPF6_BOVIN YIPF6_BOVIN Protein YIPF6; 1e-172 479 100.00 0.995762711864407 1 noncoding 0 0 0 0 -0.0581191432197397 0.646264837965883 -0.0101616079500839 0.941086317889721 ACTCCTGGCCCCGAAGAAAGGAACTGAGGCGACACGAATCCCCCTGTCCAACAGCCAGAAGACGAGACACGAGTGCCAGGGCCGCCAGCAGCTGTTAGGCGCTTTTTGGTGACGCGGCCTCCGCGCGCAGACGCGCTGACGGGCCGCGGCCTCCACGTCGCAGGTTCCGCAAAGGCTTGTGGGAGCGACCGGGAGGAGGGCCAAGATGGCAGAAGCGGTGGAGTCTCCAGGAGACCCGGGGACAACAACGCCCAGGCCCCTGTTTGCAGGCCTTTCTGATATATCTATCTCACAAGACATCCCTGTGGAAGGAGAAATCACCATTCCTGTGAGATCGCGCGTTCGGGAATTTGACAGCTCCACATTAAATGAGTCTGTTCAGAATACCATTATGCGTGATCTAAAAGCTGTTGGGAAAAAATTCATGCATGTTTTGTACCCAAGGAAAAGTAATACTCTTTTGAGAGATTGGGATTTATGGGGCCCTTTGATCCTTTGTGTGACGCTTGCGTTAATGCTTCAAAGAGGCTCTGTAGATAGCGAAAAAGATGGAGGGCCCCAGTTTGCAGAAGTGTTTGTCATTGTCTGGTTTGGTGCAGTTACCATCACCCTCAACTCAAAACTTCTTGGAGGAAACATATCTTTTTTTCAGAGCCTTTGTGTGCTGGGATACTGTATACTTCCCCTGACAATGGCAATGCTGGTTTGCCGGCTGGTACTTTTGGCTGAGCCAGGACCAGTAAACTTCATGGTCCGGCTTTTTGTGGTGATCATCATGTTTGCCTGGTCTATAGTAGCTTCAACTGCTTTTCTTGCTGATAGCCAGCCTCCAAACCGCAAAGCCCTTGCCGTTTATCCTGTTTTCTTGTTTTATTTTGTCATCAGTTGGATGATTCTCACCTTCACTCCTCAGTAAATGGAAATTAAAAACCAGGGAATTCAGAATTCATCTCAAAGATGCAATTCACCATGAAGCTTTGCCTCTGGCCCTCTTTTGTCTATTTTGGAGTTACTTGGTAACTGGGTGTGTGAGGTGATTAAAAAGGAGCCATAAAGCACCGTCACCATTTATAGGCACATGGATAATTATAGAAAGCAAGACCAGAAGGGAAAAGGACTCAAACAAAGGAAACTCTGTTTCAAGAATTGGAAGGTTTCATGTTTTAGATGAAATTCAAGTGTGTGAGCATCATTGCCTAATGTGATGCATTACTGCCATTGTGGTTTATCACTTGCTGCTCCTACTTCTGAGATTGACTGTTGTCATATTCTTTTAGCAATAGGAAAGGCAAAGACTGGATTTAATTGCTGTTCAGATTATAAAAAACTCAATTGATGCAAATATCTTTATGTAGTAGTGTTAAAATTCAGTCACTAATTGTCAGATCTTTTGCCTTTTGCCTCTTAAGTGACTTATTGCGTGAGTTGAGTTGTATCTTTTTGCTGTGTTGGGGATTTTCTTTTGGGAAAGGTGAGGGGAATCACAGGGCATGGTAAACATTTTACTGTTTGTTTGTTATTTTATAAAATGTTCCCCAAAAAGTGATTAGAAGGCTAGTAAGCATATATTTGAAAGTTTAACTGTGTACACTACATAATCTAAGCACTTACTGTGTTTTGACTTCTTGTTTATTCTTGGAGATGAAAATGAAAATCTCCCATCGTTTCAGATTCTTGGGTAGCATCAAGTCATTGAAATTTACCTAAAACCTATCACAATATGATCAGACATCCATTGCATGCAGTTATTTTATTCTAGAGTAGAATACTGAAATTGTGATTCTTAGTTAAACTGTTCATTTCTCAGACAATTTGGATAGAAATAAACGTGTGAATGTTAATCCATATATCATATATGTAAAATAGAAATACTTTTCTGGATTCTGTGGACTTTTATTAAAAATAATTTCTAGGGATTTACTTAGGCCATAGGATGGCTAAATAATAATGTGACAATAATATTACTACTAATAATAGCTAACATTTATTGGGCACTTACTGTGTACCAGACACTTCTATTTTTTTAAGAATTTTTATAACATCTTTATTGGGATACACTTTACCACAAAATTCACCCTTTTAAAGTAATGTACAGTTCAGTGATTTTTCAATATATTCACATAATAGTGCACCTATCACCATTATCTCATTTTAGAACATTCTATCATTCCACAAAGAAACCCCATATACATTAGCAGTCACTCCCTTTTTCCCTTTTCCCTACCCCCTGGCAGCCATCAATCTTCTTTCTGTGTCTGTTGATTTGGCCAGTGCATCTCCTCCAATCTTCAACATAAAGTGGTACAATCCTTATTTTGTTGTTGTTGTTCAGTCACCAAATAGTATTCGACTCTTCACGACCCCATGGACTGCAACATGCCAGGCTTCCCTATCCCTCACCATCTCCCGGAGTTTGCTCAAGTTCATGTCCATTGAATTGGTGATGCCATCCAACCATCTCATCCTCAGTCGCCCTCTTCTGCCTTCAGTCTTTCCCAGCAATATCAGGGTCTTTTCCAAAATCCTCATTTTACTGGTAGAAAATTGAGGGACAGAAAGATTAAGTAAATTGTCCAAGGTCACACAGTAAATTGATTTAAAATAGGAAAACACATTATCTGAGATCATAGTAGGACAATAGTTTTGAATTGCATTGTTATGCATATGAAATAAATACACCCCTTCCCCAGGGTATGTTCCCCATTATTAGCCATTACAACCTACAGCTGTAGGTGGTCAATAACTTGTTCTTTTTCCTGAGTACTGGAGCAGTACATTAGCAGCATCTGAGAAAAACACAAGAGCAATTGTACATTGGGAAGAGTTAGGTTTGCTGCCCTCACTCCTTGAGCCCCACCCTCCTCGCACCACCAGCCACACATATCCCTCCCCTTTAAGGGATCTTAAGAATCTTAAGAATCAAGTCTTAAGAATCAAGTAGCTTCTGCCTCTTTGTTTTATTTCTTCTAGAGGGATAGTTAACACATCATAATTTAACTTGTCTATTCATGTGTTTATAGTCGAGATGCCGCTGGTCACATACAGTACCAGCTATATTCCTAAGACGTCAGAGAGCAGTAGTAGTATGAGAATAGAATTCTTTTCTACTTGGGTAAACTAGGTGGGAGGGAGAAATAACACAGTAAATAAAGGTTTTGCCTTAATGAAGTTAGTGTTCCAGCCTCTTAGGAAGTGGCCACATTCTGCTCTTGTTCACTCTGTTCTCTTTCAGAGCCTTTGTACTTTGCATCATCACTGCTGGTATTTCTTGGTCCTCTTCAATATGCTGTTTTAATCCTCATTTTTCCTATAAAGAACCTGTGAAAAGAATAAATCTGTAAAATGATTTGTGAATATTAAATGTACAAATAAAAAACACTGGAAAAG EMBV3_12795 AGTTCACTGTCGAGCGCTTCAGCAGACTGAGTCTTGGTCCTGTCACGCGCAGGCGGTGCT Variant GeneID:514813|USP7:XM_002697958:668_cdna 173^311 3 EMBV3_23143 GeneID:514813 25 GENE USP7 NULL similar to ubiquitin-specific protease 7 EMBV3_28126 CAGCCCTTTGCATCAGATTCTGAAGGTTGCCCTGCCTTATCAATCAAGCCATGAGCTCAG Gene BVT0101_074230 + 0 NULL GK000006.2:26956259-27014752 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03430 GGCGCCGAGGAGCCCATATCCGTGAGTCAGATGTTCCAGCCTATCATTTTACTTATTCTC Gene GeneID:535392|LOC535392:XM_002690051:22_cdna Constitutive 0 NULL GeneID:535392 9 GENE LOC535392 NULL similar to Temporarily Assigned Gene name family member (tag-241) EMBV3_26704 CGGAGCGGACACGAACACAAGGAACTATGAAGGACAGACCCCATTGGCTGTTTCAATAAG Gene GeneID:507483|ASB7:XM_002696500:76_cdna Constitutive 0 NULL GeneID:507483 21 GENE ASB7 NULL ankyrin repeat and SOCS box-containing 7 EMBV3_07720 TGGCCAGAGGGAGCTGTATCGGGACGTGATGCTGGAGAACTACCAGAACCTTCTCTCTTT Gene GeneID:784290|C18H19ORF41:NM_001110097:460_cdna Constitutive 0 NULL GeneID:784290 18 GENE C18H19ORF41 MGC148309 chromosome 19 open reading frame 41 ortholog EMBV3_17068 GGGGCAGGGCCTTCAAATAGAGGTTGTGTCTCTGTCCCAGGGTTAAAACAGGATGGTCAT Gene GeneID:520254|SH3BP5L:NM_001075802:5_cdna Constitutive 0 NULL GeneID:520254 7 GENE SH3BP5L NULL SH3-binding domain protein 5-like EMBV3_04861 GGAACAGCCCTGGTTTGAGGTGGGATGTTAAAGAGTTTGCAGGTGGAGCAGTGTCGAGAT Gene BVT0102_120859 + 1 EMBV3_29305 GK000010.2:73649589-73694667 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022138 1 XLOC_012809 NonCoding TCONS_00022138 XLOC_012809 NonCoding NonCoding - 10:73653376-73654517 - TSS16028 1141 1 TCONS_00022138_1 45 1 0 1.19243573986163e-05 1.76133894840389e-05 0 9.46134029012681e-05 2.16353810044336e-05 0.000147345596474869 3.06663510266683e-05 0 3.45755051780089e-05 0 0 0 0 0.000103066992578259 0 0 0 0 5.65630286701689e-05 0.000422283426741017 2.66058406910868e-06 0 0 0 0.000133590293394216 0.000450762285024467 3.08105830335163e-05 0 0 0 0 noncoding 0 0 0 0 -0.112590419071463 0.343525725930592 0.0316980544370889 0.601493531145441 GGGAGGAGTCAGGTTATCTCAGATGAGGCAAAGAGGACTTGGAGACAGCCAAGGTAGGACAACTCCTTTTAGAAGTATGGGGGAGGGGGGGAGAAAGGCAAGTGGTAATCATTTAGAAGAGTATGTATCCATCTCAAGGGAAAGGCTTCTTTATAGATGACGGCAAGAGTTGAAGGGGAGAAGGGTTTGAAGGAAGATGATCATAGTTTAGGCTAAGTTGAAGAGAGGGGCAACAAGCTCATGGTACAGAAGTGGGAATAGGCAGGAGGTGCTGGGTTTGAGAGCACATGCAGGGTCAGGTCACCTCTGAAACAGGAAGGCAGGGAGTAACGATGGACGCAGAATGCAGCTAGACTTTGGGCTTGGCTCGAGGGAAGAAATTTCTCATGTAAGAATTTCTGTACAGTAAAGTGCGTTGGTGGGTGGGGGGATGGAAGGGAAAGCCTGAGACTAGGCAGGACCACCAGGAGCGGGAGAGGAAACTGGCCAGGGGTATACGAAGGGATGTTGGGTGGCTTCATCTAGGGAAGTCCTGCAACCCAGGCTGGGCAAAGACAAGTGAACACATCCAGCTCATGGGGGCTTTCAGCTCAGATGAATTAGAAATAAAGGTCTAAGATATTGCAGTTTATTGTGGACAAGGTAGCTACAGTGATATGCCTTAGTCTTTAAGCAGAATAGCAAAGAAAAATGAAACCAAGCTGTGGGAACAAAAGAGAGCATAGGGACCAGCAGACTGGCAGTTCTAATGATGTTAATAAGCAGGTGGCATGAAAGCTGAGAGGGGAACAGCCCTGGTTTGAGGTGGGATGTTAAAGAGTTTGCAGGTGGAGCAGTGTCGAGATCCAGGTTTATGTCATGCCTTCTCTACCAGCTTGTAAATTCTGAGAGGCCAGGGATGGGTATACATTGCTGTGTCCCTCAGTTCAGTGTATGTTGAGGGCTCTGACCTGTCTTTCATTTGGCTATGTTATCATGATGCATTAAAGGATACTTGGATCATGTAAATCTTTCTCAGTCCCAATAAAGAAAGTTCATTCTAAACAAATCTTTATTGTATCTCTTTGTCATGAAGAGAACTCAAAGAGAGAGAAAAAGTCATTTCCAATTCCAGTATTCCTAAAATCATTTTATTTTTTCT TCONS_00017822 TCONS_00017823 . 5' 3751 TCONS_00017822 TCONS_00017823 . 5' 3751 EMBV3_08872 GATTGAAAAGATGGATGACAATCTTCGCCAAAGCCCTCAGCTTCCTCCTCGGAAACTGCC Gene GeneID:616872|MTX3:XM_002690459:349_cdna Constitutive 0 NULL GeneID:616872 10 GENE MTX3 NULL metaxin 3 EMBV3_32837 ATGACATCATCCAGAAGGGGAAGGATATCAAGGGGGTGTCGGAAATCGTGCAGAATGGGA Gene GeneID:327700|FABP1:NM_175817:26_cdna Constitutive 0 NULL GeneID:327700 11 GENE FABP1 MGC137071 fatty acid binding protein 1, liver EMBV3_19147 CAGTGTGAAAACTGGGTGGTAATAAACTTTCCCTGCAGCCTCGCTGTAGTTTCATGAGTC Gene GeneID:528099|RAB32:XM_002690302:9_cdna UTR3_Alt 2 NULL GeneID:528099 9 GENE RAB32 NULL RAB32, member RAS oncogene family EMBV3_27243 GGTGGTGCCCAGGCTTCCTACATAAACCCAGTTTGCTGTGAACCTTCAGACCGGCTATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15641 CATCTACCCATGTCTGGGATCTCTGAGCCACACTTCACCCTTGGCAGTGGGCATGGAAAT Gene GeneID:514538|LOC514538:XM_002694767:545_cdna Constitutive 0 NULL GeneID:514538 18 GENE LOC514538 NULL similar to chromosome 16 open reading frame 7 EMBV3_01791 AAGAGACAAGGAGTTGCCAGAAGCCTAGCTTTTCCCTAAGAACCTGCAGAAAGGGCTGTG Gene GeneID:531367|NXN:NM_001102136:136_cdna Constitutive 0 NULL GeneID:531367 19 GENE NXN MGC151821 nucleoredoxin EMBV3_02196 CAATCAGAGCTGAGAGTTCCTCACAGGGTCAGTCCAGGCTGGCATTTGACTTTCCAAATG Gene BVV0102_264333 - 0 NULL GK000018.2:38495940-39079784 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41107 GGCATCCTACAACACCTACTACCATAGCCCTCCTCACCTGCCACCTTATTCTGCTTATGA Gene GeneID:533569|MGC142908:NM_001083721:18_cdna UTR3_Alt 3 NULL GeneID:533569 X GENE MGC142908 NULL hypothetical LOC533569 EMBV3_37000 GATACTGTCTTGGGCTTCCTGGAGAATGGGCTACTGGTTATCTACACATCATCTTGTACA Gene GeneID:616597|RAD9B:NM_001035479:273_cdna Constitutive 2 NULL GeneID:616597 17 GENE RAD9B NULL RAD9 homolog B (S. pombe) EMBV3_43680 CGGTCTGCCTAAAAATGGCAGCAGGGGCTTTTACAGCAGGACTGTTGAACTCCATGGTTC Gene GeneID:787385|LOC787385:XM_002693732:465_cdna Constitutive 0 NULL GeneID:787385 15 GENE LOC787385 NULL similar to Olfactory receptor, family 5, subfamily F, member 1 EMBV3_07782 TCTGCTTTAGAGGGTAGCTGAAAGCACGCAAAGGGTAAGAGGCATGGCCGGAGGTGTTAA Gene GeneID:614057|TMEM44:NM_001099131:123_cdna Constitutive 0 NULL GeneID:614057 1 GENE TMEM44 MGC152471 transmembrane protein 44 EMBV3_11521 CTGGCCGAGTACCGCACGGCCTACGCGCACTACCATGTAGAAAAGCTCTTTGGCCTGGAG Gene GeneID:519699|TMEM151B:XM_002697303:147_cdna Constitutive 0 NULL GeneID:519699 23 GENE TMEM151B NULL transmembrane protein 151B EMBV3_16405 TTTGATGACGAAGATGATGAGCTCTCACAGGTATCTCATGGTCCATCAAAGAGACTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07899 AAAAGGGAGATACTTCAGCTTCAACAACAGCATTAGCTAAGAGCTTAGAAGATGCCCTGA Variant GeneID:508853|IMMT:NM_001046015:62_cdna 467^667 2 EMBV3_12082 GeneID:508853 11 GENE IMMT MGC133830 inner membrane protein, mitochondrial (mitofilin) EMBV3_31283 TCTAGCAGTCTTGAAGATCCACTCTGCTGAAGGAAGGTTCAGAGCTTTCTCCACCTGCAC Gene GeneID:520162|LOC520162:XM_002693730:459_cdna Constitutive 0 NULL GeneID:520162 15 GENE LOC520162 NULL similar to olfactory receptor, family 5, subfamily W, member 2 EMBV3_33754 AGATTTTGAAGAATTTAATTGTTGTGAAAGGCAACTGGAAGCAAGAGTTGCTGAAATTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21296 TTAACCTCTGCAAACCCAGCCCATGCATGAACGAGGGCATCTGTGTCCTGCGCAACGGGA Gene GeneID:530237|VWA2:XM_002698512:98_cdna Constitutive 0 NULL GeneID:530237 26 GENE VWA2 NULL von Willebrand factor A domain containing 2 EMBV3_32765 GCAGTATGACTTCTTCTCCCACCCCTTAAGATTATTCTGAAGCCTGTCCTGGGTCTGCCT Variant GeneID:507710|TMEM92:NM_001083651:65_cdna 244^430 2 EMBV3_12253 GeneID:507710 19 GENE TMEM92 MGC148280 transmembrane protein 92 EMBV3_29679 GCAAGAGATTTTATTGGGAAAGGGCACCTGGATGGAGAACAGGAGGTTAAGGGAACCCAG Gene BVT0102_430656 + 0 NULL GK000016.2:64844925-64948312 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105514 TCONS_00130065 TCONS_00049923 TCONS_00038652 TCONS_00087771 TCONS_00137738 TCONS_00065509 TCONS_00105518 TCONS_00148242 TCONS_00033020 TCONS_00087770 TCONS_00187480 TCONS_00105517 TCONS_00231373 TCONS_00087769 TCONS_00087768 TCONS_00192557 12 XLOC_062585 XLOC_078776 XLOC_030054 XLOC_022475 XLOC_052590 XLOC_083948 XLOC_040228 XLOC_090124 XLOC_019254 XLOC_113525 XLOC_140862 XLOC_117220 NonCoding TCONS_00105517 XLOC_062585 NonCoding NonCoding LOC100848049 2:70424682-70429157 x TSS77842 1110 3 TCONS_00105517_4 62 0.105405405405405 3 0.752570406794814 0.00106843579321373 0.000878298132587325 0.00148098621287059 0.00101557571634317 0.000760015967911005 0.000356094191685955 0.000751696955100122 0.000138954438282452 0.000146923006211656 2.7506364081331e-22 4.97754642347754e-19 1.61062221231673e-05 5.1348807404224e-05 4.4134697469849e-60 0.000179174758937063 0 0 0 0.00113897860801414 0.000468979852757174 0.000296963849880206 0 0 0 0.000545550810560221 0.000146422086204305 0.000485565797951496 2.44646206349121e-17 3.27232131975826e-19 3.50269598063393e-16 XR_238555.1 LOC101901949 PREDICTED: Bos taurus uncharacterized LOC101901949 (LOC101901949), 5e-145 518 88.59 0.352252252252252 0 noncoding CCTTCCCTGCAACTTTCAATTGCTTGTGCAATGTAGCATAAAATGTAGAGGTCTCCCTTTTCTTTTCTCTCTTTTTTTTAAAGGGGCCATAAAATTAATTACAATAAGTAGGCAACGGGCAGGGGCAGGGGGTTAACTGATGGCTCTAATGAGCTGCGGAGCTTTGGGAAAGCTGGACCACTCATGCTGTTTGTTGGCTGCGAGGGGCCATGGCTTCCAACAGGAGCACAGCGTAAAGAGGTCCTTTGGACTGATTCTGTCTTCATGGCAACCAAAGTAGCTAAGCTTCAAACAAAAGGAGCCTTCCTTTCGGAAGTGTTTCCTATCACAGGAAGAAGGGAGTGCTCAACTTGGTGAGGGGAACTGAGGAGTGCCGCAATATCTTTAAAGAAGTGTTCTATTAAAAGAGGACCCCACTGCCATAGAAAACCCTGGATCTATGAAGACATCAAAGACAAAGACCTAATTTTTCTCTCAAAAAGTGAAACTTGATTTCCATTCAATATTGAATTTGATGTTTAAAAATTCTGAAGTATGTCAGAGCTGAAGTTTATCTATGCTATTTTGTACTGGATACATCTACTAGTGTGACAAATTAGGTGTTTTCCCAGAGTAGCAGTTGTCTGAATTCATCTGCATGAAGGATACAAACAGGTATGTTTTCAGAATATTGTCAGAGTGGTCTTAGCTTTTCAAAGCAGTTTCTCCTATACCATTTTGTTAGGGGAAGCATATTGACTGAAACTGCCCACCCTGGCCAGGCACCATAGTAACTATTTGCATGAGTTATTTTACAATAGGAGGTCCTGGTAAGGAACACAGAACTAATAAGCCACCACCAACCAGAAGAGTTCGGGAAAGGTCAAAAGGAGACACCACATGTCCGACCACCTCCCAGAATCCTCCTCTCTGGCATCCATCTTGGCTGAACAAGGCGTGCACCACCAGGAAGGACTCTGAGTCGGAATGATTAGCTAAAGACAACCCGGAAACTAATCCCATCACCATAAAACCTGCAAGCTGTGTGGCAGAGCTGTTCTCCTGGGTTCCCTTACCCTACTGCTCTCCACCCGGGTGCCCTTTCCCAATAAAATCTCTTGCTTTGTCAGC TCONS_00102622 r 5' 3523 TCONS_00102622 r 5' 0 EMBV3_35132 GTCAACAGAATATCCTTTCCATCATCAAAGAAATTGTTAGGGTGGATTTAATGATCCTGG Gene BVT0102_403078 + 1 EMBV3_32497 GK000023.2:4906606-4937119 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133792 1 XLOC_081210 Coding TCONS_00133792 XLOC_081210 Coding Coding GFRAL 23:4922687-5011035 j TSS99853 2457 1 TCONS_00133792_1 403 0.212454212454212 10 0.972302398496836 0 5.72559474630244e-05 4.89626806049821e-05 0 2.21411681889588e-06 0 4.24429929224712e-06 5.03722972657171e-15 3.21128371619947e-06 0 9.31698208344837e-07 1.45530696822207e-06 0 0 2.79932799214573e-14 4.75243420488604e-05 0 0 0 2.92692679270959e-06 1.8523930206924e-05 0 0 0 0 1.77050058966022e-15 2.98641176407098e-15 0 0 0 XM_610461.5 GFRAL PREDICTED: Bos taurus GDNF family receptor alpha like (GFRAL), 0.0 2022 100.00 0.455840455840456 NM_207410.2 GFRAL Homo sapiens GDNF family receptor alpha like (GFRAL), mRNA. 0.0 1218 82.22 0.497354497354497 TCONS_00133792_1 sp|Q6UXV0|GFRAL_HUMAN GFRAL_HUMAN GDNF family receptor alpha-like; 0.0 603 76.52 0.935483870967742 1 coding 0 0 0 0 -0.00591529390889747 0.96962635284592 0.0125385947779343 0.816035622788107 ATGATAGTCTTCGTTTTCTTCGCTGTGGGTCTATGCTTGAACAAGTCCGCTTCCCAAACCACAGATTGCACATATTTAAGAGAGCTCTGCCTAAGTGATGCCGACGGTTGTAAACATGCCTGGAGAATAATGGAAGATGCCTGCAATGTGTCAGATCCAGGCAACACCTGCCAGATGAAGAATTCATCCAGCTGTGGCCTAAGTATCCAGTCCTTAGTGGAAAGCAATTTACAATTTAAAGATTGTCTCTGCTTTGATGACCTTTACTGCACTTTTAACAAATTGCTTGGGAAAAAATGCATCAACGAATCAGATAACATAAAAGAGGATAATAAATACAAGTGGAATCTAACTACTCTTTCCTATCACGGAGGCAGAGGGGTTCAGTCCTGCCTGGAAGTGGCAGAGGTTTGCATTGGGGATGCACTCTGCAATGCCCAGCTGGCCCTTTACCTGAAAGCTTGCTCAGCGGATGGAAAGCTGTGTGATGTGAAACACTGCCAAGCAGCCATCCGCTTCTTCTATCAAAATATGCCGTTTAACATTGCCCAGATGTTGGCTTTCTGTGACTGTGCTCCCGCTGATGAGCCTTGTCAACAGTCCAGAGAAGCACTCCACAGCAGGCCATGTGCAGTGAACAGAGTTCCAACCCCCACCTGCCTCGATGTAATTCACAGCTGCCAAGATGATGAATTATGCAGGAGGCGCTATAGAATATTCCAGGCCAAGTGCTGGCAGCATGTGATGAGAAAGTGCCATGAGGATGAGACATGCATTGGTACCTTAAGCAAGCAAGACCTCGCTTGCTCTGGAAGTGACGACTGCAAAGCGGCTTACATTGGTACCCTTGGGACCGTCCTTCAAGGGCAGTGCACCTGTAGGACCATTACCCAAAGTGAAGAATCCTTGTGCAAGACTTTCCAGCATATGCTCCACAGAAAATCATGTTTCAACTATCCGACCCTGTCTAAGGTGAAAGGCATTGCATTGCAAAAAGGAAAACATGCAAAGGAGATAACTCTCAGTGGATTTCATCCCTCCTTCAATGGCGAAGTCATCTATGGTGTCGTGTGCGTGACGGCCACCTGCGGGATCCTTCTCCTGCTGATGGTCAAACTGAGACCCTTCAGAATATTGAATCAAAACAAGAGATCCTTCATGAACCCAAATACCTGGCACACTCATGATTCATTAAGAGTCGCGGATGATTAACAATCACTTTTGTTAAAGCAAGTCAACAGAATATCCTTTCCATCATCAAAGAAATTGTTAGGGTGGATTTAATGATCCTGGATCATCAAATATGTTCATATATACAATTCAACTAAAACCAGAATTATTAGAGAGGAAACCAGGACAAGGGAAATGGGAGGAAAAGAAATGAGGTGATGAGAAGAAATGAGAAGAGAAAAGAAAAAAAAAAAGCAACAACAAATGCCAGCGGATTTGACAGACTGGCCTTGTTTCCCTCTCATCCCAGTTTTCTGAATTATCTCCCCTTTTGCAGGCAGAAGACCAAAGAGTGCATGGTAAGCAGAGAGAACCCTGGATATAAAACTACTCGAGAGACAGTGTTTGCAGACCGATTCAGATTAGGGCTTTGGAGGTTGTAGCTGCTTCACTATAATTTTATAGGTCATTATAGTTATCTTCGTCAGAAGTCCATCAGAGAAGACCCCAGCAGTTTCCCCATACTGGATTTAATTTGTTGATCAAATGTAATCCTTTTTGTTAAAATCCATGAAGCATATTTGAGATTTCTGACTAGAAATGACTAGAAATCAATTGATTCCACTGAGGAACTGATGTATGTTTATATAACGGACACTGAAACCAGTATCTAAATATATTTGTCTTTTTGATACAGCTGCTAGAAAGTCAGAGTTTCCTTTGCACCTAACAATTAGAAAGTTTCCCTCTGTACAGACTCCTATTATATTTTTATTTTCTAGTGTACATTTGAATTTGCCTCGTTATCTATCTTATTTGTAATCCTACTCCATGTAATAAGTGTCACAAACAGGATAGGCTGGGTTATCCTATAGCAACAAGTAATCAGGATATGTCAGTGGATTATAATGACAAAGGTTTATTTCTTGCTCACACTAAAAGCTCATTACTATGAGCTGTCAAGAAGCTCTGAATTTGTTCTGTTGACTTCACAGAGAGATTTAGGCTGACACAGCCACTTTTCTCTGAACTATTACCAGAGGTGAATTAGAGATTATGACAAAGTACATGTTGGATCTTAAACCTCCATCTAGGATGTGCGTGCACGCATGCTCAGTTATGTCCAACTCTCATGCGACCCTTATGGACTGTAGCTGGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCTAGAGTTCTGGAGTAGGTTGCCATGCCCTCCTCCAGGGGATCTTCCTGACCCAGACATTGAACCTGGGTCTCTTGCATTGCAAGCAGGTTCTTTACC EMBV3_21040 TCGGCTACTGCAACAGCTCGCTGAACCCGGTCATATACACCATCTTCAATCACGACTTCC Gene GeneID:282135|ADRA2A:NM_174499:12_cdna Constitutive 0 NULL GeneID:282135 26 GENE ADRA2A NULL adrenergic, alpha-2A-, receptor EMBV3_00150 CCCCTGAGGGCCAAGTCCATTGCTTATTGTTTCTGCTGATTCTCACGGTGGTTTATTTCC Gene BVV0102_441945 - 1 EMBV3_01001 GK000003.2:18900668-18938122 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18457 AAACGAATGTACTGCTCTGTCCTGACGAGGAAGGGCGAGGTCTCGAGGGCACAGCGTTCG Gene BVT0102_424642 - 1 EMBV3_43783 GK000001.2:138676650-139155489 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005435 TCONS_00005436 TCONS_00005434 1 XLOC_001257 NonCoding TCONS_00005435 XLOC_001257 NonCoding NonCoding - 1:138679880-138681050 - TSS2690 942 1 TCONS_00005435_1 41 0.435244161358811 2 0.195893926432849 3.78136283056005e-11 5.50564802044792e-11 2.89895190601356e-08 0.000220384235962986 7.12064109759187e-10 7.59401298863599e-06 3.92192966550167e-05 0 0 0.00062773327512473 4.85982592370756e-06 0 4.12093421641179e-10 0.000354544509996842 0 0 0 0 0.000270755106896611 0.000841217972110654 0.000755000231468179 0 0 0 7.69935630798308e-09 0.000107644539159974 3.5507436658109e-10 0 5.15263178077126e-06 0 XM_002704654.3 LOC100335451 PREDICTED: Bos taurus collagen alpha-1(XVII) chain-like (LOC100335451), transcript variant X1, mRNA. 3e-38 163 71.52 0.332271762208068 0 noncoding 1 1 1 1 -0.0774227327970909 0.482175558018292 0.017152988626032 0.796913104112341 GAGGGGATGCGGCCAATAGCTGGTCATCAGGTGGACAGTGAGTGAGAGGCAGCTTCAGGCCTCCTCCCGGAAGCCCTCCGGCTCACCTCAACTTGGGCCAGCGGCGCTGGGGGCCCAGCCAGGACCGGGCCCCTGGAGGGCGAACGCTGTGCCCTCGAGACCTCGCCCTTCCTCGTCAGGACAGAGCAGTACATTCGTTTGGTAAAGACTTACAGGGCCATTGTTACCTGACCACGACCTGACTTCAAGAAGAAAGGCTCTGACACCAAGACGTTTGCAACAACTGAGTCCCTCCCTCACTTTTGCTTTAAACGGGCTTTGCTGAAAGCTTTCGGTAACTTTGGGGTTCTTTAGGCGTGAGCATGACCTTGGAATCAACCTTTCTCCGTTCCAGACGCCAGTGTTTCAGTATTGTTTGGCCTCACTGTGCAACACCCAGAAATACATTATTCAAACAGAAATTTGAGAACTCCCGATACAGGTGTTAACCAAGCCTCTCTATTATACAATTATGGACCCAAGGCTGTCCTTAATGAAATCTAGGTGCTGGCCCACTTGTGTATAAATTAGCTAGGACTCAATCTTGTACTACTATAGACTCTAGACAAGTATTTCCCAATCTTTAATGCATGTAAGTCACCACGGAGTTTGCTAAATGGCTGATTCCCAGACCCCATTCAAAGGGACTGGGTTGAAGCCAGATTTTCCTGGCATTTCAAACAACTACCTCATGTGATCCTGATGTAGGTATTCTGCTCGATTCCCACCTCCTAAAGAACCCTCTGGAAAACAATATTCCTGTGAGATAGTTGAGCAACCTCTGAAAGAACACTTTATTTCCGATTTTTATCGCCTCTTATACAATAAACTCCATTTGTAAGTAACTTAAATTGCCAGAAATGTCTTCTTACATTGTCTCAAAATAAAGTCTAATATAATCTG TCONS_00002345 TCONS_00002346 TCONS_00002352 r 3' 3232 TCONS_00002345 TCONS_00002346 TCONS_00002352 r 3' 4055 EMBV3_07306 GTGCACTTGTAGCACGACAGGAAAATGGAAGTCCAGCAGGAGGAGACGCTAAGGAATTAG Gene GeneID:541208|LPGAT1:NM_001083756:105_cdna Constitutive 0 NULL GeneID:541208 16 GENE LPGAT1 MGC148488 lysophosphatidylglycerol acyltransferase 1 EMBV3_38341 AGCTGCTGTTGCATGCAACCTTATTGCAATCAGTATATCATTCCTGTGGCATTTTCTGTC Gene GeneID:788978|ARHGAP5:XM_002696718:130_cdna Constitutive 2 NULL GeneID:788978 21 GENE ARHGAP5 NULL Rho GTPase activating protein 5 EMBV3_31138 CTTGAGAATACCCAGTGTCAAGATGGTGATGAAATGATGGAGAGTGAACGAGATCGCCAA Gene GeneID:541113|LRRC2:NM_001080311:146_cdna Constitutive 0 NULL GeneID:541113 22 GENE LRRC2 MGC137458 leucine rich repeat containing 2 EMBV3_03647 TTTTTTGTTTCTGTGGCCTCCACCCTCACCCGAGCCACTGGCTCTGCACTGAAGCTATTA Gene BVT0102_425266 + 0 NULL GK000002.2:5398903-5567015 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104379 TCONS_00104378 TCONS_00104380 TCONS_00104382 TCONS_00104383 TCONS_00104381 TCONS_00104384 1 XLOC_062366 Coding TCONS_00104379 XLOC_062366 Coding Coding NAB1 2:5564747-5616142 j TSS77302 6202 1 TCONS_00104379_5 487 0.0311189938729442 8 0.879480094952718 5.9085036995666e-05 4.28564268801608e-08 5.15050174745626e-10 2.66613698040953e-14 2.4499746780841e-23 2.80528470328475e-118 2.84437724115716e-08 0.000223084977488257 0.000120126902991143 0.000218480466694671 3.55053272321792e-35 8.49138423045783e-09 9.64027685331812e-05 1.6463460773089e-46 2.28849559198784e-18 0.000483982248551021 0.00204564311020917 0.000455937257677984 2.03518217114538e-06 0.000199385059289579 1.9744229801427e-05 0.000242720653367649 5.63601583404816e-07 0.0010956145240421 0.000764593189507529 0.000125985078797958 5.30132238668992e-11 5.31875807712684e-05 6.64820547997494e-11 3.5024026313563e-09 XM_005202199.1 NAB1 PREDICTED: Bos taurus NGFI-A binding protein 1 (EGR1 binding protein 1) (NAB1), transcript variant X1, mRNA. 0.0 7290 100.00 0.651564011609158 XM_005246581.1 NAB1 PREDICTED: Homo sapiens NGFI-A binding protein 1 (EGR1 binding protein 1) (NAB1), transcript variant X4, mRNA. 0.0 4792 86.50 0.652047726539826 TCONS_00104379_5 sp|Q13506|NAB1_HUMAN NAB1_HUMAN NGFI-A-binding protein 1; 0.0 971 95.89 0.997946611909651 3 coding 0 0 0 0 -0.0134098615478055 0.906181067604826 0.0119465157500943 0.842277566686051 NNGCCGCAGCCGACCGAGGAGACCGAGCCGGGGGCCGTCACTTCGGAGTTGGGGCTGAGGTGTCCTCTGGGGAGAGCGCGCCAAGACCGCTGCAGCAGCTGGCCGAGTTAAGCCCATCCACAGTGATGGCTGCAGCCTTACCCAGGACCCTGGGGGAGTTGCAGCTGTATAGAATATTACAAAAAGCCAACCTGCTTTCTTATTTTGATGCCTTCATCCAACAAGGTGGTGATGATGTCCAGCAACTCTGTGAAGCTGGAGAAGAGGAGTTCCTGGAGATCATGGCACTCGTGGGCATGGCTAGCAAGCCCCTTCATGTTAGAAGGCTGCAGAAGGCTTTGAGAGACTGGGTTACAAACCCTGGCCTTTTCAATCAGCCACTGACGTCTCTGCCTGTCAGTAGCATACCCATCTATAAGTTACCAGAGGGCTCACCAACATGGCTGGGAATATCCTGCAGCAGTTATGAAAGGAACAGCAGTTCCCGAGAACCTCATCTAAAAATCCCCAAGTGTGCTGCCACCACGTGCGTGCAGAGCTTGGGACCGGGGAAGTCAGACGTGGTGGGGAGCTTAGCGCTGCAGAGTATCAGTGACTCCCGACTCTGGCAGGGCCACCACGCCACTGAGAGTGAGCACAGCCTCTCCCCAGCTGACCTTGGCTCCCCGGCTTCCCCAAAAGAAAGTAGCGAGGTGCTGGATGCTGCCGCTGCGCTCTCTGTAGCCGAGTGTGTGGAGCGCATGGCCCCCACGCTGCCAAAAAGTGACTTGAACGAAGTGAAAGAGCTGCTGAAAACCAACAAGAAGTTGGCCAAGATGATCGGTCACATCTTTGAGATGAGTGATGACGACCCACACAAAGAAGAGGAAATTCGAAAATACAGTGCAATATATGGCAGATTCGACTCGAAGAGGAAGGATGGGAAGCACCTCACACTTCATGAGCTCACCGTTAATGAAGCAGCCGCTCAGCTCTGTGTAAAGGATAATGCCCTGCTGACAAGAAGAGATGAGCTTTTTGCCCTGGCCAGGCAGATTTCTCGAGAAGTCACCTATAAATATACTTACCGAACCACCAAGTCAAAATGTGGAGAGAGAGATGAATTATCCCCGAAGAGAATTAAAGTAGAGGATGGGTTTCCAGATTTCCAGGACTCTGTGCAGACACTCTTCCAGCAGGCTAAAGCTAAGAGTGAGGAGCTCACTGCTCTTAGCTCACAGCAGCCTGAAAAGGTGATGGCAAAGCAGATGGAGTTCCTCTGCACCCAAGCTGGCTATGACAGACTGCAGCATGCCGAAAGAAGACTGTCTGCAGGACTGTACAGGCAGAGCTCAGACGAGCACAGCCCTAACGGCTTGATGTCAGACAGCGCTGAGGGACAAGGAGAAAGACCTTTGAATCTCCGAATGCCTAATTTACAGAACAGACAACCCCATCATTTTGTGGTGGATGGGGAGCTGAGTAGACATTACTCCAGTGAGGCAAAGTCCCACTCATCAGAGAGCCTTGGGATTTTAAAAGACTATCCTCACTCAGCTTTTACTTTGGAAAAGAAAGTCATCAAAACAGAGCCTGAAGATTCAAGATAGCTGTGGTTCTTCCACTGTTCTCTGGAAATGGCATCAGAGTTAAGGATAGTGCTCCATCATAGAAATAAGCCTTAATAACCAATGTTGCCTCATTCAGCACAAACAGATTTCATAGCCAAAGCATAAGGACTGATACAGTAGTCTGTGGAAACCAGGAAGACAAAACCACAGCCGCAAAGGGGTAAACTGAGAGAATGTTGCAATCTGTAACAGAAATACTGATCCACATTCCTGTGTAAGTCGTTTTATGTGGAAAGGCTTACAAATTAATACTGTAAGCATTCACTATTTAAGAATGTACAATGTACTTGTGTAATTTATAGAAGTAAAATCTAGGTGTTGAGACCTGTTTGGACCAATAGATGTGGATAAAGTTTATTTTACTTGAAATTTCATTGTCTGCTTTAAGTGTTTTACGTAAATATTATTGTATGTCAGAGTTCAGAATCTTTGCAGTCATAAAAAAGAAAGTTTAAAAGTTTAAGTGATGTAGTTGTTGGCAAGGTTGTAATGACTTTGGAAAAATGGAAAGCAGATACTCAATTTAAGCCAAGGAAAATGTTGTAGTTTTAATACCTGATAAAACTGATTTTGTTTAAATAGGAAATGTCTCATTTCTTAGCAGTCAGGTGTCATTTTTACTGGCTTAATTAGGCAATAGTTAATAAATACTGGAGTGGAGTTAAAAAGATGAGCAATAGAGTAGAAATCTCTCCTACCTGGTTGATCCAGGTTGCATACTATGATAGCTACTTAAAGTATGACAAAAATAGGAAGCTGCTCCTTGGACAGAGAGCCTGAAACAATGGACCCATGCACAAAAGCCGTGACTTCAACATTGTTTTTTCAGAATGTGTTATGTAGATTAAGACATAGTAAGTTAACCCTAAATGTGATAAGAATGATGACTGTTAACAAAGGCTATCTATGTAGTAGAGTAAGCACTGTTTTATATCCAGAAAGTCCTGTACGTAGAAAATCCTTTTCTACATACCAGAGTCAGAGAAGCTAGATGGTTCTCCCTGGGGAACATATTCCCATCCAAACAGTTCACAGTTGTGGACGACCGGTGCATCCACATTTGCAGGCATATTTCTATGAAGGTTTAGTTGACACCTATATTCATTATTTATTTTACAATTTCATTTTTGTATACTTTTCGGATTTATGAATGCAGTTTTTTCTTAAAACTCATTTTAACTTGAAAATCTGTTTTAATTCTCCCTATTTAGTTAGTGGGCTATATACATATATATGAGAGTGTGCTTAAATGTTAATAACATGCTTGCATACTTACCAGAATTTCCCATTGGAATCCACAGTGAAAAACAAATACTACTTCTACCAATGTATATTTTTCTGTTGGTTTAAGAGGAGAAGATTTTTGACAGCTTTACCTCCTTCCTCCAGATTTAAACCCAGAGATTGCCCAGGAGAGTGTGTTGACTTGGAATATGTGTTTTTTGTTTTCAGTTCTGCTCTGGGTCATAACTGAATAAACATATTAAGTTACAGTCTGTTATATTAAAATTCATCAGCCAGATGTCAGATGAAATGTCTGCACTGTAGTCTCTGATCACTGTCACATATATAATTCCTTTTTCATGTTGATTTGTAGAATAGCTTTACAGTAGAAACACCAGTAAACAACTTTTATACTATTAAAAGGCTTTTTTCCCTTCTTAAATGTTTTAATTGTACCATAGTGTTTTGCCCACTGAAGAAGCTTTTCATGGACCTTGCAACTTTGTTGCTAGCTTTAGGTTGATAATTGTGGTTGTATTGTTCACTGTATGTAGAAATAGTATGAATATGATTTACATAGATTGTTCGGTTTTTAATATTAGCCATAGAACTGGTTAGTATCTCAGTAGTTTCATGAAACGTTTCCTGTATTCTAATCTATTTTGAGAAATTTTGTGGGTTTTTTTTAATTGTGTCTTACAGTTCAAGTTTGTAGATTTTAATAAGCGACAATTTTTAAAGATATGGTAATCTTCCAACTAATATTTATCTGTCTTTCACGACCATACAGACTGCATCTTTAAATCCATGAATAAGTTTCCTTAAGTATCATCCTTTCCTGGTTTTTTTCGTGCTTAGTGGTAAGGGGAAGCACAAGAAAAATTTCAGTAGAATACGGTTTTTATTTTGTAAACACTAATGTATTAAACTTGCTATACATTGAAGCAAATAATATATATTTTTATTTGAATTGTATATATGAACTGGATGTTATAACTAGTCGATTTTTTTCATTGTGTTAGAGGTATTTTCACTGAACAAGGTCAATTGGTTACCTCAGTATTACAGCCAATATAGTCCAAGGGACCATTTCTCTCCAAGTCTTGTGTTGTGCTTTATTATGTGAAGTCCTCGTTTCTGTGACTGTAACCGCTGTCGGTGAGGTGGGATGAGTGCACTGGCTTCCTGTGGCAATAAAGACGTTCTGTGCCTCACACATCTATGTTTATAGAGTTTTCTGCATAGCATTCCTCACAGCAGTACTAGCCTGCCTGTCTCCCCGCTCGTTTGGTCTGGGCTTGAGTGCCAGGGCCAGGGGCTTCTGTCTTAAGCCTGTTACTGTCAGCCGCCTTCATCTCTGTAAGGTTGTCGGCAGGCAGGTACTCAGTTTACGCTGGCTGTCAGAATTTGGTTTATATTGTTCTCACAAGAAGGTTACAAAGACATTTTGAAAACTACCCACCATGTCTAACCAACTGAATCAATAAAAGGGGGAACATTAGGACTTAAGACTGCAAACATACTAATATTTGCAAAGTGTTAATGTGACTCGGCCTCAGTATTAAGGGCTATATATGAAATTGAACTAACCTGTGGTAGAGAATTAGCAAAAGCCTTGCTGTGAAATTGTAATGGGTGAGTTTGGTAGATTAATAGCTTCAGTGCAGAGCCAGTGGCTCGGGTGAGGGTGGAGGCCACAGAAAAAAAAAATATATATAAGAGGTGAACTTTGCCCTTTGGGAACCTAATACCTAGTTGAATGGGAATTTTTGTCACTCAGATAAAATCCAGATTCCACTGTGTTACAGAGGGATAAATAAGGAACTGACATTTAAGTGAATTTTGTGTTCAGTAGGCGTTACGGGAGTAAATGCTTTACAGGTGAAAGAAAGCGCGTTGAGTGAGTGAGGCTGGCGATGAGCCAGGACTGGAAAGATGTGGGGTGTGCCTATAAAGCTGTGGTGGGCGTGCATTTCACTTGGAGGTCACTTTTTTAAAAGTTACAAAGCTGAATGCTTCAAAATAATGCTTGCCATGGATAATCATTCTTTCGACAGTCCCATTGAACTTACGAAAAGGCAGCGGCTTAATGTGTTAAGACTGAATATTACTGTCAGCTGCCTGCATTTCCATGAAGTTTTTGGCAGACAGGTACTCAGTTGACTCTTCTGTCAGAAAGAGACTTCGGTTTATATTGTTCTCACTTAATGAGAAGGTTACAAAGACATTTTGAAAACTACCCACTGTATCTAACCAACTAAATCAATGAAAAGGGGGAATATCAGGATCTAAGGCTTTGCAAACTTATTAATATTTACGAAGTGTTAATGTAACTAGGCCTCAGTATTAAGGCTTATGCTTTTTCCTGTCCTTAATTAGTAAAACCGCCTGGGGAAAAGCTCTAGGATTTGGTGATTATGAGCACCTAGTGAACCTTTACAGTAAGTTTAAGAGCTGAAGCCTAAATAAGCATGTAAGGAATTTCCTAACGTGGTCTGCTCACTTGGCTACTCAGATGTCTAAGTATTACTGACACAATACGCATTGTGCTTGTGACTTCACCTAATACTGCACTGACTCTTCAAAAGACAATCAACCGAGGTAGCAACCTAGAGAAACTAGGAGGTCTGTCTCTTATAGGAAGTGAATTCATCAGTAAATAGCTGAAGTTAGAGTTGAGCAAACATTTTTGTGTTTGTAACAGCTTGAAGCATAAGACCAAATATGGTAGCTGCTGTTTAACTAAAAACCACCTTATGGTCCAGCTGTGTGCATGGGTGGTGTTTCAGGGAATCCAGACTTATTTATTTGTTACTATCTGTGGGTGTTCTCATAAATGAGATAATCTTAAGTGGGCCTCCAGACTTAATAAAAGAATGATCCAATGTCAAGAAATTTGTTTTTTATTGTAAATATGTGTAATTTCAGAAAACCTTACTGTTGATTCTTAGTGGCTCTACAAGATGATTCTTATTTTACATTGAAGCGATCAAAAGCTAATTGTAGTGTTTTTCTTTGAGTATGCAGCAGTTGCAGCTTTAAAATCTCTTCTCTGGCCTCTGTTTTTACTGACCTACGAAAAATTTTTTAAAAAGAAGAAAACACCTCTATGGTGTTTTAAATTTTTTGTGCAGAAAAAGCTAAGCAGAAATTTATTTTGTAAATTCACTGTCAACTTATTAAAGTTAGAATCTGAAAACTTACTGTGTTTTATCTTATAAATTTTTTTCTGTCTATAAGTTTAGCAATTTTCAGGAAACTATGAATAATCGGTTGGTTCCATTTACAAAATTGGTTTAAAAATCCCTTATATTTTTATTCTTTCATACTCTTCCTGTCTTCTAAGGGCCACAATTTTGAATTATTAA EMBV3_02072 AGGGAGACTGGGCAAGACTTTTACGCCCTACACTGCAATTTGGTCTTGTTGCTGCATCCA Gene GeneID:617172|PPAP2A:NM_001080329:7_cdna Constitutive 3 NULL GeneID:617172 20 GENE PPAP2A MGC133873 phosphatidic acid phosphatase type 2A EMBV3_11641 TGGACTTGCAGCGGACACTCGGCTGCTTGGAAAACCGCGCGGCTCTGACCTTTCAGCAAA Gene BVV0102_369796 - 0 NULL GK000027.2:26326101-26392537 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39710 TGTGTCTCTCCACCCAGAAACCCTGAGGAAGTTTATAACAGTGGGTCAAAGTGGGGTCTC Gene BVT0102_330681 + 0 NULL GK000016.2:69290272-69443237 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068134 1 XLOC_041594 NonCoding TCONS_00068134 XLOC_041594 NonCoding NonCoding - 16:69311636-69312963 - TSS51073 1217 2 TCONS_00068134_3 104 0.693508627773213 2 0.083710407239819 0 0 0 0 5.07105277741139e-07 0 0 0 0 1.01425161722874e-05 2.25720660607906e-05 3.23192728653168e-05 0 3.86523325823634e-05 0 0.00162766319521541 0 0 0 0 1.78174173014472e-07 4.26826573532219e-05 0.000881975122219026 0.000247956670032153 0 0 0 3.15699860447525e-05 0.000251306916246732 0.00011362508781896 XM_005201359.1 KIAA2018 PREDICTED: Bos taurus KIAA2018 ortholog (KIAA2018), transcript 2e-150 536 83.84 0.405916187345933 0 noncoding 0 0 0 0 -0.0768684988384878 0.503313838599414 0.0116611716694721 0.818036385982278 CATTACTTTGCCAACAAAGGTCCATCTAGTCAAAGCTATGGTTTTTCCAGCAGTCATGTATGGATGTGAGAGTTGGACTATGAAGAAAGCTGAGAGCCAATGAATTGATGCTTTTGAACTGCGGTATTAGAGAAGACTCTTGAGAGATCCTTGGACTGCAAGGAGATCAAACCAGTCAATCTTAAAGGAAAACAAGCCTCAAGGAAGGCATTCCTGAATATTCATTGGAAGGACTGATACTGGAAGCTGAAACTCCAATAATTTGGCCACCTGATATGAAGAACTGAGTCACTGGAAAAGTCCCTGATGCTGGGAAAGATTGAAGACAGGAGGAGAAGGGGACAGCAGAGGATGAGATGGTTGGATGGCATCACCAACTGGATGGACATTATTTTGAGCAAGCTCCGGGAGTTGTCGATGGACAGGGAAGTCTATGGCGTGCTGCAGTCCATGAGGTCGCAAAGAGTCAGACAGGACTGAGCAACTTAACTGAACCTGGAGCCGGTCAGACAGTCAAGACTGGAGGCAAGACTCTAGCCATTATGACCTTCCCTGAGTTCCAAAGGGCAGATTTGAACAGTTGCTAATCAAGGGAGGAACAGCTGAGAAATGACCTCAAGCAAGACTAAAGAACCAGAGAAGCTCATCAAGATTAGGAGACACCTGAGAAGAACTTAAGAAAGTGCAAACACCCTAATCTTGTTAGAGACCCCACTTTGACCCACTGTTATAAACTTCCTCAGGGTTTCTGGGTGGAGAGACACAAAGTTTTTCTGGAAAAAGCCTGGTGTGTCTCCCTTTGCCTGGCAAATCAATAAAGCTTTTCTACTTCACCCAAAATTGTCTCCTGGATTTGATTCAGCACCGCATGTACAGAAAGGCCAATCTTTTGGTAATTTTCTAATGGGGAGTGTGATGGTTCTTGTTCCCCTGTGGGAGGATACTGGGAAGAGAATGATGGAGAATGATTATTCCTTGCTGCCTTACCCAGTGGTTAGCCACTTGAGTAACTCAAGCTTTCACAGATCCTGCCAGACTCACTCTCAATCTATGTTTGTATCTGGCATAGTTACTGGCATTTACACGTACATACATGTACACACATTATATTTGTGTATATATTGTCATTGTTTAGAAATGTTTTACTTTAATGCATTCATATTTGTCAAACTCTTTTATGGCTTCTATGGTTTGAATATGAAGAAAGACGTCCCCAC TCONS_00070049 r 5' 39022 TCONS_00070049 r 5' 39022 EMBV3_39222 GCAGCCATGTTTGCTGCAGATCCTAAAAAACCTATTGGAGGAAATATCATTGCTCACGCC Gene GeneID:514749|RAD51:NM_001046179:154_cdna UTR3_Alt 2 NULL GeneID:514749 10 GENE RAD51 MGC128559 RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) EMBV3_13007 GTGCCATATCCCACCCCTTTGGAGCCTTTCCAGCTAGATCCCAAACATTTGTCAGAGACC Gene GeneID:530210|LOC530210:XM_002696366:47_cdna Constitutive 0 NULL GeneID:530210 20 GENE LOC530210 NULL similar to F49C5.4 EMBV3_36090 TGTATGGCCGTGGGCATCTCTTACATTAGCGTCTACGACCATCAAGGTGAGACCCAGAGC Gene GeneID:525986|NUS1:XM_002690085:43_cdna Constitutive 0 NULL GeneID:525986 9 GENE NUS1 NULL nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) EMBV3_33862 ATTCAGAAGCACCGGAAGCAGCTAAAAGCCGAGGAGCAGTGGCAGCGGCGCCAGCACGTG Gene GeneID:541187|ATP8B1:XM_002697775:333_cdna Constitutive 0 NULL GeneID:541187 24 GENE ATP8B1 NULL ATPase, class I, type 8B, member 1 EMBV3_08319 CGACGATCACTCCCGAACAGATAATCGTCCACGTAATCCAAGAGAGGCTAAAGGAAGAAC Gene GeneID:507482|FMR1:XM_002699624:19_cdna UTR3_Alt 2 NULL GeneID:507482 X GENE FMR1 NULL fragile X mental retardation 1 EMBV3_33089 GGGGCAGTTTTTAGGAAGCCTGATGGTTTTGATAAACTAAGAGAGCTGGTCTTCAGGCCT Gene BVV0102_105585 + 0 NULL GK000018.2:1367609-1449429 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085128 TCONS_00085130 TCONS_00085131 TCONS_00085132 TCONS_00085129 1 XLOC_051802 Coding TCONS_00085128 XLOC_051802 Coding Coding - 18:1397501-1426513 - TSS63653 1901 2 TCONS_00085128_2 81 0.201472908995266 3 0.934576539933129 0.000204439704994427 0.000346994555328914 0.000170342169241943 0.00173456543267479 0.00233778131920572 2.53255689065219e-14 8.24990277216901e-05 0.000343971286052863 0.000278378078027396 1.25878390386972e-05 3.26983193231051e-09 0.000376103087366686 3.01610166517069e-17 0 1.13789963783827e-08 6.34468531969918e-06 8.72826184321081e-06 1.3189936740629e-05 1.17718006111776e-15 0.00110720908287875 4.50585440368681e-05 8.14218879228178e-18 3.69381926368172e-15 0.00017637168222556 9.01379803574731e-16 0.00096546288883381 0.000646157581055001 1.5154874234402e-05 1.6495849728359e-05 3.1609792741091e-06 XR_228391.1 LOC101902469 PREDICTED: Bos taurus uncharacterized LOC101902469 (LOC101902469), 8e-69 266 100.00 0.076801683324566 TCONS_00085128_2 sp|P59045|NAL11_HUMAN NAL11_HUMAN NACHT, LRR and PYD domains-containing protein 11; 1e-14 70.1 47.30 0.851851851851852 1 coding 0 0 0 0 0.00178350545091746 0.987609152584036 -0.00155257884814203 0.97709971375686 CTGTCTGACATCCTTCACTCGGAGTTTTATAGTGTCCTGTCTCATGACCACAAGGAGGGTTCGTGCCAAGGGGCAGCTCCCGGGACTGTTGCTGCTGGTGCCGCCATCCCCACAGTGAGTGACTGCCAACCCATGCCTGCGCAGGAGACCCTCTAACACTAGCAGATTCCACAATTCCTTGGTCCTGGAGACTCTTTCTAAGTCTGATCCTGCTGGACAATCAAGATGGCAGAATCAGACCACCTGCTGTGGTATCTAGAAAAACTTAATAAAAAGGAATTTATGAGATGGAAGATCCACCTTGGACAAAAACATGTGGAGCTCGGACTGCCAGAGATCCCAACTTTCGATCTAAGGACAGCCAAGGAAGACCTGGTCAACCTGTTGACGACCTCTTATAAGGCACAGCACGTCTGGAACATGATGTTCAGCATCTGTGAAAAGCTCCATCGTAGAGCTAGCTCTCTGTGAGAAGATCAACACCAGGCAAAACTGAGTTAGTGGGTAGGGTTGGGGGCAGTTTTTAGGAAGCCTGATGGTTTTGATAAACTAAGAGAGCTGGTCTTCAGGCCTGGAAGCCATCAGATGATGAGTGATAAACCGCATGTGAGTCTTGTCCTGTCCGGTGACTTTGCGATTCTACCCAAGTGTCTTCCATCCTGCTCTTAGGCAAGCAGCCAGCCAAAGGATAAGACCCAGCCAAAGACAGTGCTCAAGCTAGCGCAGATTCCAAGCCTAACACTTTGCCATGGAACTGTAAGATATGGCCAGAGAAATCAGTTTGTTATTGTTCATTGACTCAGTCATGTCTGACTCTTTGCAACCCCATAGACTGCAGCACTCCAGGCTTCCTGGCTATTATCATCAGGTGGTCAAAGTATTGGAGCTTCAGCTTCAGCCTCAGTCCTCCCAGTGAATATTCAAGGTCCTTTCTTTGAATTCCTTTCCTGGGTGCAGGACAGATCCTCCCACCCCTCAAGCTCACTGCCGCTGGGAACAGGCAGATCAGTTACATGCAATCACAGCCTCAGCCCAGGGACAGCTTTCAGAGACCAGCTGGCTTTTCTTCCTCCATCAAGTTCTGCGGTGGTAGCAGATCTATTCGGCTCCCCTTGCCCTGGGGATAAAATTTTCTTCAGGTGTTTTTTTTTTTTTTACCAAGGGAGGTCTCATCTCTGTCTGGAAGTTTGTTTAGACTCACTTTTGCATCCCAGGTGGCGCTGGAGGTAAAGAACCTGCGTGCCAGTGCAGGAGATGGAAGAGACACAGGTTCAATCCCAGGGTCAGGAAAATCCTCTGGAGGAGGAAATGACAACCCACTCCAGTGTTCTTGCCTGGGAAATCCCAGGGACAGAGGAACCTGGTAGGCTATAGTTCATGTGGTTGCAAAGAGTCAGACACGACTGAGCAACTGATCAACAACAACAATGATGTACACAAATGAGAAAATCAGAGAAAAAGTAAATAGGTAATTAATGGTTGAGAGTCGAAGATCTAATAATTAGCTGCCTTGAGCCAGTTTATATCAGGAAACTGTCTCTGGGAGATAGTGAAGGACAGGGAAGCCTGACAGGCTGCAGTCCGTGGGGTCCAAAAGAGTCGGACACGACTGAGCGACTGAACAACAAAACCAGGAAGCAGTCTCTGAACTCAAGAATCACGACTTCATTTTACATAAAAATTTTCCTTTGATGTGTTATAACTAAAGGTTGTTGAAAATGCTGTGGAACCCGAAAGGTGAAAGAAATAAGGTTTTTCTTATGCCAAAATACATGAGAAAAAAGCTGTTATGTTCTGCACCAGTGGTAAAACAGATCTGCAGCTTGTTATTTGGATCAATTTTACTTTATTTGATTCTACTGATGAAAACTAGGTTTTTGCAATCTTCTTTTAAAATGTTA TCONS_00082041 r 3' 29517 TCONS_00082042 r 5' 22887 EMBV3_27715 CTGTGGTCACCAAGACAGCCTGGAAGTTGCAGCCTGACGGGTCACACGTCCCCCGTGGAG Variant GeneID:508813|KATNB1:NM_001101909:153_cdna 330^460 1 EMBV3_12350 GeneID:508813 18 GENE KATNB1 MGC165864 katanin p80 (WD repeat containing) subunit B 1 EMBV3_38264 GGAAAATAGCTACAGTTTTACGGCAGCTATGGTTTTGTTGGTTTAACTTGCCGGAGCTCC Gene GeneID:525740|MSL2:XM_002685053:141_cdna Constitutive 0 NULL GeneID:525740 1 GENE MSL2 MSL2L1 male-specific lethal 2 homolog (Drosophila) EMBV3_16628 GCTCTTGTGGTTTCTGATTACTTCCTGAATGGTGAACCAAAGTCGTAGTTTCCAGGAACC Gene BVT0102_061897 + 0 NULL GK000003.2:69382505-69667898 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12527 GCAGGGGACAGGAATAGCCAGTCAGTGGAACAGAAAACCATGCACAAAGTTTGAGGCCAT Gene BVT0102_041588 - 0 NULL GK000005.2:45323764-45355305 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36780 CTGCAGAAACAGAAAGTAGCTTAGAGTTTACCAGGGGTTGTGGTGAGGGGAGAATGCGAG Gene BVV0102_249070 + 1 EMBV3_07799 GK000010.2:85759040-85776884 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06994 CAGTCTGCCGTCCTCTACATTATGCCTTTGTCATGCACCCTCGGTTCTGTAACATCCTGG Gene GeneID:511266|LOC511266:XM_002689057:35_cdna Constitutive 0 NULL GeneID:511266 7 GENE LOC511266 NULL similar to Olfactory receptor 2G2 (Olfactory receptor OR1-32) EMBV3_23275 GGCCGGCCTGCTCCTAGCCTCGCACCTCTACCACTTCTTCTGTGGATGGCCCTCGGGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34643 TGGCTCATGAGTGGTGGAGAAATTGAAAGTATATCGTTTGAAGATGTGGCTGTGAATTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09342 GAATCCTAAGTTTTGTGACCTCCTGCTTCTGACATCCTGGTTAGTGAGTGTCCTCGACTC Gene GeneID:785624|LOC785624:XM_002688683:126_cdna Constitutive 0 NULL GeneID:785624 7 GENE LOC785624 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_36522 AAGAACTCCTGAAGATGTGAAAGCACCTGATTCTGTGGAGAAATTACCTAAAACCCCCTC Gene GeneID:781491|LOC781491:XM_002691031:398_cdna Constitutive 0 NULL GeneID:781491 10 GENE LOC781491 NULL similar to Six6 opposite strand transcript 1 EMBV3_33469 AAGTGTTTCGGATCATTCCAGGGGGCTCGTGATAACTGCCAAGGAAGGAGGGACAAGCAT Gene GeneID:281336|MYF6:NM_181811:3_cdna Constitutive 0 NULL GeneID:281336 5 GENE MYF6 NULL myogenic factor 6 (herculin) EMBV3_28459 GCTCATCACAAGACTGATGGTCACCTGAATGAACACAATGAGGATGGGAATCTCAGGAGG Gene BVV0101_016501 + 1 EMBV3_41536 GK000021.2:29365804-29500831 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21068 GGAGGCATTGTTCATTTTAGAGGTCCAGGAGCTAAACAGCGCAGTACATGAAGATTGCAG Gene BVV0102_350694 + 0 NULL GK000008.2:94210544-94935844 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29911 AATGCCCAGCCTGGAAGTGATCACCCTCAGCAGCGACCAGGGGCAGCTTGGCCTGAAGCC Variant GeneID:518967|C1H21ORF2:NM_001075781:38_cdna 216^617 5 EMBV3_15552 GeneID:518967 1 GENE C1H21ORF2 MGC139666 chromosome 21 open reading frame 2 ortholog EMBV3_03968 ACCAAAACTGGCATCTGAAACACTTCTGCTGCTTTGACTGTGACAACATCCTAGCTGGGG Gene GeneID:534965|TES:NM_001046390:66_cdna Constitutive 0 NULL GeneID:534965 4 GENE TES MGC134324 testis derived transcript (3 LIM domains) EMBV3_32693 TGGTTCAAGAAAACCCCGAGCTGGCCATGGACTCACTGGTGTACGTCAGCCAGCACATCA Gene GeneID:515338|ACACB:XM_002694538:486_cdna Constitutive 1 NULL GeneID:515338 17 GENE ACACB NULL acetyl-Coenzyme A carboxylase beta EMBV3_02820 CTGCCAGCCCTCTGCTCTTTTCTGGGGCAGCTTGATTGCGTGTGAAGTTTGGAAACATAT Gene GeneID:616209|LRRC47:NM_001102298:210_cdna Constitutive 0 NULL GeneID:616209 16 GENE LRRC47 MGC160022 leucine rich repeat containing 47 EMBV3_30594 TCGACTCCCTCTTCATTGGCTTCTCCTATATCCTCATCCTGAGGGCTGTGTTGGAGCTCT Gene GeneID:506332|LOC506332:XM_002693404:71_cdna Constitutive 0 NULL GeneID:506332 15 GENE LOC506332 NULL similar to Olfactory receptor 557 EMBV3_13700 GGTTATCGCAAAGTGATCATTTCAACCAACATCGCTGAAACCTCCATAACCATTACAGGA Gene GeneID:528151|DHX33:NM_001034563:129_cdna Constitutive 2 NULL GeneID:528151 19 GENE DHX33 MGC127095 DEAH (Asp-Glu-Ala-His) box polypeptide 33 EMBV3_34634 GCACTAAGATTTTATCTGGAATGCAAGAGAGGTTGAAAGAGGTTTCAGTAGTGCACATGT Gene GeneID:281193|GJA1:NM_174068:2_cdna UTR3_Alt 1 NULL GeneID:281193 9 GENE GJA1 MGC128721 gap junction protein, alpha 1, 43kDa EMBV3_23925 GCTTCACGGGAGACAGATGAAGCCCACCAATGGGTACTTTTGCTTGGGATAAAGAAGAGC Gene GeneID:282277|MRPL43:NM_174563:54_cdna Constitutive 0 NULL GeneID:282277 26 GENE MRPL43 MGC137560 mitochondrial ribosomal protein L43 EMBV3_21676 AAGTGCAGGTGTGATTAACTGTGTTGGCACCCACTTGGTGTTTTAATTGCCCCGCCAACG Gene BVT0102_006904 + 1 EMBV3_36448 GK000019.2:44609788-44614051 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17535 TAATCTGAGTCTGAAGTCCACAAGCTGAACCCCTATAGCATCCTGCCTCCCACTCTTCAC Gene BVT0102_015556 - 1 EMBV3_34693 GK000010.2:36478925-36490426 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14452 CTGGGAGTTAGTTTTGGAGCGCCATTCGGCTCAGGTATTGGCACTGGCTTGCAGTCAAGT Gene GeneID:614694|NUPL1:NM_001098129:64_cdna UTR3_Alt 2 NULL GeneID:614694 12 GENE NUPL1 NULL nucleoporin like 1 EMBV3_15505 AATCTGAGCACTAGAAAACCCCCTTCGTGTCTCCTCAGAGGGGCGTGCGCTGTCGTCTAA Gene GeneID:100297337|LOC100297337:XM_002686228:230_cdna Constitutive 0 NULL GeneID:100297337 3 GENE LOC100297337 NULL hypothetical protein LOC100297337 EMBV3_38527 TTGCTTGCCAGATGTCACCCATCCTTTCCCCAAAAAAGTCTTGGCTGAGGCTGTGGCCTT Gene GeneID:280844|LPO:NM_173933:6_cdna Constitutive 0 NULL GeneID:280844 19 GENE LPO NULL lactoperoxidase EMBV3_26110 TTTGCGGCACTCCCCACCTACGAGAACTGGGTCAGCAGTTTGGACTGGCAGGTCTACTTT Gene GeneID:511877|LOC511877:XM_002698071:57_cdna Constitutive 1 NULL GeneID:511877 25 GENE LOC511877 NULL similar to Polyserase-3 precursor (Polyserine protease 3) EMBV3_28808 GGTAGCCAAGCTTTATTCCTACCATTTCCTACCCCCCACCTGTTTTTCAGGTGTCTTATC Gene BVT0102_030397 - 0 NULL GK000006.2:56820319-57070202 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205146 TCONS_00205148 TCONS_00205150 TCONS_00205147 TCONS_00205145 TCONS_00205153 TCONS_00205151 TCONS_00205152 TCONS_00205149 TCONS_00205154 1 XLOC_124594 Coding TCONS_00205154 XLOC_124594 Coding Coding ARAP2 6:57067485-57251086 = TSS153274 7979 1 TCONS_00205154_9 1696 0.0255671136733927 32 0.95671568627451 1.47375566347763e-07 0.00107882023197892 0.000437412317817569 3.35998035834066e-05 7.17476374591752e-08 0.000277271116127224 0.000106218390327187 6.26372291839967e-12 0.00161442880186225 0.000292071798209066 6.79717554929942e-05 1.29759870342306e-12 2.98868819302935e-05 0.000183758502062792 1.21287453197397e-05 0.00244128774132536 7.21102796050392e-34 4.13326793920913e-15 0.00150975524529073 0.000912929222104615 4.13625714202206e-07 0.000985865850167479 0.000304957241972983 0.000665486404355084 7.67055238831521e-05 0.000480845215647911 0.000655308785216466 1.05204676409335e-08 4.42881980968617e-07 0.000179210593895078 XM_589445.6 ARAP2 PREDICTED: Bos taurus ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 (ARAP2), mRNA. 0.0 1.419e+04 99.37 0.999874671011405 XM_005262638.1 ARAP2 PREDICTED: Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 (ARAP2), transcript variant X1, mRNA. 0.0 6635 87.34 0.669382128086226 TCONS_00205154_9 sp|Q8WZ64|ARAP2_HUMAN ARAP2_HUMAN Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2; 0.0 2956 84.63 0.997051886792453 10 coding 0 1 1 1 -1.23717237281123 0.0215705665869453 0.0228300333555461 0.741143732851049 ATGTCCTCAGTCAGTGAAGTGAATGTTGATATCAGAGATTTCCTAATGAGCATTAATCTGGAGCAGTACCTCTTAAACTTCCGAGAATTTGGTTTTAATAATGTGAGGGACTGTGCAGAAATAAATGACAGTGTGCTCCTCAAAGTTGGAATATCACCTACAGGACACCGGAGGAGGATACTTAAACAGTTACAGATAATCCTGTCAAAAATGCAAGATATCCCAATATATGCAAATATTCACAAAACAAAGAAGAATGATGAGACTTCAAAGGATCACCAGGCTCCGTCTTCTGCTCAGAATACCTCCTTAGAATTTTCAGATTCACATGGTGTTCAGATACCTAGCCGGATACAGTTGGAGACTGTTACAAAAAATGTTGGAGAAAATGAGGTTTGTGTGGAAAATAGCCAATCTCTTAAATCAGATGATAAGCTGACTCTTCCTACACACAACTTCCCCATTCCAGAAGACGAACCACACTCGAATTCAGGTTCTTTTCAAGATTCTTTACTTCGTAATGAAATTACCGACATAGAATCTTTGATAACAGAGAAGACTGTGGGCTGCACAGCTGAAGAAGAACACACAGGAAGAGATGATTTGATTTCAGAAAATGTAGGCAAGCTTCCTAATGCAGACCTTGAATTCCTTTCCTCCCATGACTCTTCAGTATCAGAAGCAAATTCTGGAAATGGAACTAACGTTTTATTAGAAAGCTCACCACCATCCCCATTCTTTCAGTTTCAAGGAGAAATGGTTGTAAATGATTTGTATGTGCCATCATCACCAGTCCTAACACCTATGAGAAGTCGTAGCAAGTTGGTTTCAAGACCATCTCGATCTTTTCTGCTAAGACATCGGCCGGTACCAGAGATTCCAGGATCAACGAAGGGAATTTCAGGGAGCTATTTCCGTGAGAGAAGAAATGTTGCTACCTCAACTGGAAAATCTGTGACACAGCAAAACACAAATGAGGAGAATTCATCTTCCATTCTACCTTATGGAGAGACCTTTCTCCTCCAGAGACTAGAGAATTCCAAGAAGAGATCTATAAAGAATGAATTTTGGACCCAGGAAGAAACACTCAAAGGGGAAACAACTACTGAAAGAAACTCATTTTTTGTCAAATCAAGCATATATGATAACAGGACGGAAAATATAAGTGAAAACAAAGTAGAAGATATTTGGATACCTCGAGAGGACAAAAGCAATCTTCCTATAGACTCTGCTTCAGAATCAGAGTATTCAACAGTAGAAGAATGCTTTCAGAGTTTAAGAAGAAAAAATTCAAAGCCATCTAAATCAAGGACTCAAAAAGCAGCAAATTTGGACCCTGTTAATAGGCACAGTTATCCACTAAGCTCAACAAGTGGAAATGCTGATTCACCAGTTATTTCCTCAAATGTAATATCTCCCTATGCCTGTTTTTATGGATCATCTACAAGGAAGGTTAAATCCGGATGGCTTGACAAACTCTGTCCCCAAGGAAAACGCATGTTTCAGAAGAGATGGGTGAAATTTGATGGCCTTAGCATTTCTTATTACAATAATGATAAGGAGAAGTATTCAAAAGGAATAATCCCCCTTTCTGCTATATCTACGGTACGAGTTCAAGGAGACAACAAATTTGAAGTTGTTACAACACAAAGAACTTTTGTTTTTAGAGTAGAAAAAGAAGAGGAAAGAAATGACTGGATCAGCCTACTATTAAATGCACTGAAGTTACAGGCCCTTTCTTCGCAGTCTCAAGCTGCTATTGCACCTGAGAAATGTGGATATCTTGAACTGAGAGGCTATAAAGCTAAAATTTTTACTGTGTTAAGTGGAAACAGTGTGTGGCTTTGCAAAAATGAACAGGATTTTAAGAGTGGACTTGGTATTACCATAATCCCTATGAATGTAGCAAATGTAAAACAAGTGGACCGAACTGTAAAACAGTCTTTTGAAATAATCACTCCCTACAGGAGTTTTAGCTTTACAGCTGAGTCTGAAAAAGAGAAACAAGAGTGGATTGAAGCTGTGCAGCAATCAATAGCAGAAACTCTCTCTGATTATGAAGTAGCTGAGAAGATTTGGTACAATGAGTCCAACAGGAGCTGTGCAGATTGTAAAGCCCCAGATCCTGACTGGGCCTCCATCAATCTCTGTGTTGTCATCTGCAAGAAGTGTGCAGGGCAACATAGATCTTTAGGACCAAAAGATTCCAAGGTTAGAAGTCTGAAAATGGATGCCAGCATTTGGAGCAATGAGCTCATTGAGCTTTTCATTGTCATTGGAAACAAAAGAGCTAATGACTTTTGGGCTGGTAATCTTCAAAAAGATGAAGAATTACACATGGACTGTTCAGTAGAAAAGAGAAAAAATTTTATCACTCAGAAGTACAAAGAAGGAAGATTCAGAAAAACCCTTTTGGCGTCTCTCACCAAGGAAGAATTAAATAAGGCTCTGTGTGCTGCTGTGGTGAAACCAGATGTTCTGGAAACAATGGCTTTGCTGTTCAGTGGAGCAGATGTCATGTGTGCAACAGGTGATCCTGAGCACAGCACCCCCTATCTGCTGGCCAAGAAGGCAGGGCAGAGTCTGCAGATGGAATTTCTCTACCATAACAAGTTCTCAGATTTCCCTCAACATGACATATATTCTGAAGGTCGATTAAATCAAGAGTCCTCCCAGTCTACGTTCCTCTGTGACTTTTTGTATCAGGCTCCTGCTGGTGCTTCTAAACTCTCTTCAGAAAAAAAACTGCTTGAAGAGACAAATAAAAAGTGGTGTGTTCTAGAAGGAGGCTTCTTGAGTTACTATGAAAATGATAAGTCTACCACGCCTAATGGCACCATTAATATCAATGAAGTCATCTGCCTGGCTGTGCACAAAGAAGACTTCTGTTTAAATACTGGGCCCATCTTTACTTTTGAGATTTATTTACCCTCAGAACGTGCATTTTTATTTGGAGCTGAAACATCTCAAGTGCAAAGAAAATGGACAGAAGCAATAGCCAAGCATTTTGTTCCCTTTGTTGCTGAAAACTTAACAGAAGCTGACTATGATTTGATTGGTCAACTTTACTACAAAGACTGCCACGCCCTGGATCAGTGGAGAAAAGGCTGGTTTGCAATGGACAAATCTAATTTGCGTTTTTGCCTTCCAATGCAAGAAGGTCAGGAGGATAGAATGCACTTAAGACGACTACAAGAACTAACAATTAGCACAGTCGTTCAAAATGGGGAAAAATTGGATGTTTTGCTCTTGGTAGAAAAAGGGAGAACATTATACATCCATGGGCATACCAAGTTGGATTTCACAGTCTGGCATACTGCAATTGAAAAAGCAGCAGGTACAGATGGGAATGCATTACAAGACCAGCAGCTCGGCAGAAATGACGTTCCCATTATCGTGAACAGCTGTATAGCATTTGTTACACAGTATGGTTTAGGATACAAAAATATCTATCAAAAGAATGGTGATCCATTACATGTAAGTGAACTCCTGGAGAGTTTCAAAAAGGATGCAAGAAGCTTTAAATTGAGGGCTGGAAAACATCAACTTGAAGATGTGACAGGTGTATTGAAGAGTTTTCTCTCCGACATTGATGATGCACTTCTCACTAAGGAGCTCTACCCGTATTGGATCTCTGCCTTAGGATACTTGGAAGAAAGAACTGTGTATTTTTCTTTAAATCACCGCTCCACCTTTAGTATCAGTGACTTTCAGGTTCAGAAATGCTCAGAAATCAATCACATGAGTGCCCACAATTTGGCCTTGGTTTTTTCCTCCTGTTTCTTTCAAACTAAGGGACAAACTAGTGAAGAAGTGAATGTAATCGAGGACTTAATTAATAATTATGTTGAAATTTTTGAGGTTAAAGAAGACCAAGTCAAACAAATGGACATAGAGAATAGCTTTATTACCAAGTGGAAAGACACTCAAGTTTCCCAGGCTGGAGATTTGTTAATTGAAGTATATGTAGAAAGAAAGGAACCTGACTGCAGTATTATAATTCGGATATCTCCTGTGATGGAAGCAGAAGAGTTAACTAATGACATATTAGCAATAAAAAATATAATTCCAACAAAAGATGATATCTGGGCCACATTTGAAGTCATAGAAAATGAAGAGCTCGAACGTCCTCTTCACTACACAGAAAATGTGTTGGAACAGGTGCTTCGATGGAGTTCATTAGCTGAACCTGGCTCTGCTTATCTTGTAGTGAAGAGATTCTTAACCATTGACACAATTAAACACTATAATGAGAGGAAGGCCCTGGAAAATATCAAAGAGGGAGTCTTGAAAGTTAAAGAAGAACCATCTAAAATACTCTCTGGAAATAAGTTTCAAGATCGGTATTGTGTTTTACGAGATGGGTACCTCCTTCTTTACAAGGATCTGAAGAGTAGCAAACCTGACAAAATGTTTTCTCTCAGTTCAGTGAAGTTTTATCTTGGAGTGAAAAAGAAGATGAAGCCTCCAACAAGTTGGGGATTGACAGCGTATTCTGAAAAACATCACTGGCACCTGTGTTGTGAGAGTTCACAAACTCAAACGGAGTGGATGGCCAATATCTTTATCGCCCAGCATGAAAATGATATATGGCCACCAGCTGGAAAGGAACGAAAACGTTCTATAACCAAAAATCCCAAAATTGGAGGTTTGCCTCTGATTCCCATCCAGCATGACAGAAATGCAACCCAAGCCCGGAGAGAGACTGAGAGTGCAAAAGCAGAACTCGAAAGGCTGCGGCTTGGTGCAAAGCGTGACCAAGGTGGAGATGGCACCTTAAAGGAGAAAGCCTCCATCGTGGCCCAATGCCTGGAGCACAAGGATGAGAAACTTCGAAATCGAACCAGAAAACACCGGAGTTTCAACTGTCTGGAGGACACAGAGGCTGAGGTATTTCCAGGGCGACAGAAAGGCCATAAAGGCCTAAAGACACTGAGGAAGACCGAGGACAGGAATGGCAAAGATACTTTGGACTGCAATAATAAGTTACCACCAAAGGTCATAGAAGAGCTTAGCGTGGTTCTCCAGCGATCAAGAACGCTTCCAAAAGAGTTACAGGATGAGCAGGTGGTGCAGAAGGAAATAAAATGACTTGTCCTACAAATTATTTTTTTAAATATTGTGTACAGTGTCTGAAACCAAACTGTATTTTATGCTGGGAGAGATGTGTTTAGCTATCCTTAACCATTTAAAGAGCATTTTAAACTATTAATATGTATGTATATATGTGACAAGTGTTAGGATTCACTGTGTTGTGGTCTGAACAAAGCTTGTACAGTTCAAAATGTTAACCTTGCGTAGGAAGGCATTGGGTTACTCTGAGTGGCCAACCTTTTGAAGTACAGTTGACCCCTGAACAACATGGGGCAGGGGTTAGTGTGTTAATCTGTGTATAATTTAGAGTCAGCCCCCGTATCTGAAATTCCTCTGCATTCGTAGGTTCAACTGATTGTGGATCATGTAGTGCTGTAGGATTCACTTTTTAAAAATATCCACATATAAGTGGACCCACGCAGTTTTAAACCCACATTGATCAAGGGTCAACTGTAGGTGTCTGTTAAGTCGTGTAAATTTATGAACAGAAATTGCAAACTGTACTGTATTGTATAAAATGCTGTATGTAAATGAAGCCTATGAAACTATATGTAACACATTTTGCACTTTGAGAAACCTTGTATATAAAGTTATCATATGTTTTTAGGTTTACATAGGGTCCAACCTTAGGGAAAAGAAAGGAAAGTAAGTTGGAAAGGGGGAGGATTTATTTTAGTGGCTGCCTATCAAACAACACTGAGGTTTTAAAAAGAGGCAAAGAATTAACACATGTCCTGAAAGCCAAGGAGGTCAGGTTGAGATTCATTCTAGTTTACTGTTGACCAGACCTTGTTCATGAGAAACTGCTTGTTAAGAAAATAATCTAGTGACTTAAGTGTTTCCCAAGATTAGTATTCAGCCAGCACACATGAATAAGGGCACTGGCCACTGTTCCCATGGTGTCAGTGGACCAAGCGCAGTACCAACCCATTCACTACACTTGAGTTCTTTGCAGGTGGCTGCTGAGAGGACTCTTACCCTGCATTGAAGAGATCATGTATACCGGACCTGGCATGGATGCCACTTGCACTGTTGCTGTATACGAGCAAATTTTGTGACTTCCTTACTGTCATTCCAGTATGAGCAACAGTCATCATCACAGGGTTTTATTGTTTTTTTTTATTACTGTTTTACTTTGTATATTCATTGTATGTTCATTTCTGCAGTAATATTGAGTCACAATTTACTGAAACTGTACAACATATGGCCATCTGGGGGTAGGAATTAGATTAACTACTATACTTTGGGGAGCTACTAGTTCCCTTTCAACCTTTTTTTTTTTTTCTTTTTAGTAAAGCAGGAATCTTCTTCCTGTGCCTAATAAATAATGACAGAGCCCTCTATTTTTAATTCCACATAAAGACCAGCTACTAGTTTGGTTGTTTTCTCAAACAATACCATCTAAATTATAGTTGACAGGGGTAGCACTTTTCATCAGTTTCTTTAGAATTGTATTAGGTCTGGTGAGTTTTGATCAAAATTGTTTTACTAGTAGGTAGCCAAGCTTTATTCCTACCATTTCCTACCCCCCACCTGTTTTTCAGGTGTCTTATCAGAATTTATATCAGTATACAAAGGCCCATACTTTTTTCAGTCCAATCATAGTGCAGTAATATGCTGTTAAATGCTATGAATTTCTTCATTACAAAATACTGATCTCTTATACCTGGTGGTGATAAAATAGTTTACAAAGGATATGTGATATTTATTCTTTAAATCCACATAGATTGGAATTTTCTTTTTAAGAGAGAAACTGCTGGTCAGTTTATGAAATAGGTGGCACTGCTGGGGAGCCTTCATAGCTATAAAGCAAGAATCATGGTGTTTAGGAAAAAAAAAAAACTAAAACTATTATTTTTAGTAAATGATAATATTTATGTTTTATGAAATAAGGGGACATGAAAATTATGCTGGACAATGGAACAGTATCTGGATTTTTTTTTTTTTACCTGCCTTATTTGAATACTTTGGAAACTTGAGCTTAAAATCTAATAACTTCTATTTCCCTTCCTGTACAACTGTCTCCATTTTTCAAGTGTAAGATAAGGGCTAATGATGACATCTCATATATTTTAAGTAAAAATTAAAATTGTTTTCCAAGTCCACCTGAATGTGACTGTTTTTTCAAATTAACCACCTTCATCTTTTGAAAATAAATAAATAGATTGCATTTGAAAAAAGTTTCAATATATACTTCAAACTAGCTGTTAGTTTTTTAACATGTCAGTATGAATACTGTTCTCTTTTAAATGATGACTATATGCAGACATGAAGAAACAAATTGATGGTACTCTCTCATTTCTGTTGCAATAAAGTTAATAAAATTAAGCAAAAGTAATTGAAGCAAAAATATGATGTCCATATAACTATATTATCTGCTAATTTATATTTGATAATTTTAATGCTATAATATACAAACTGTATTGTGAAAGGAATATTTTTGAAAATTCACCGAATTTATTTGGATAGACTGTAGTATCCAGGTATTTGCACATTTCTCACACTTCTAATAATTACTTTGAGGAGATGATGAAAGCTTACAGTATCTCATCAAAATTTGCACCAAAACTTTCATATTATTTGCTCAACAAAAGACAAAATTAGCTTAATGTGAACAATATCTTGTTATGTGTACAATCATCACATTTATTTCTAATCATCTGAAAACAGCACAGAAATGAATATTGTCGGTAACTGAAATTTATCTGCTTCACATCCCTTAGTTATTATTTTTAAAAATTTTTTGTTGAAAATGTTGTAAATTATTTTGTATATACCTATCTTCTCTTCCATGGCTACTAATGTATAATGTAAAGTTTTTAATAACTCATATCTGTATAGATTTGAGACATTTTTGTGAATTACTGGATTAAAGTTCAGAATCT EMBV3_32117 AGAGTGGGGTTCTCTTAATGACACAGCAGGTGATTGGGCTTCTAAGTGACGATTTAGCAA Gene BVV0102_013820 + 0 NULL GK000017.2:6541149-6636916 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01159 AACTGCATTCCAGAACGATCTCCCACACAGGAGTTGAAGCCAAATTAAAAAGGAAAGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25447 GCAGCATGATGTCATCCCCATCCTGGTTCACCTGCTGAAGGACAGAGACGAGGAGGTGCA Gene GeneID:616270|RTDR1:NM_001046575:112_cdna Constitutive 0 NULL GeneID:616270 17 GENE RTDR1 MGC137142 rhabdoid tumor deletion region gene 1 EMBV3_23538 GGACAGCCATCCTGTGTTGGGCACCCATCTCTTACCAAGCCCCTTTCGAGGAAAAGTGAT Gene BVT0102_241758 - 1 EMBV3_02736 GK000014.2:68140741-68148337 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17915 CACCAAGCCCTTCTCATGGGGAGACGGCAACCACACTTTTTTCCACAATCCCCGGGTCAA Gene GeneID:282200|COX6A2:NM_174522:218_cdna Constitutive 0 NULL GeneID:282200 25 GENE COX6A2 NULL cytochrome c oxidase subunit VIa polypeptide 2 EMBV3_16899 ATGGTTATGCCTGAGCTCCAGTACATGGCCCACCTGTACACCCTGCAGTTCCCTGACAAA Gene GeneID:523830|GAL3ST2:XM_002686625:158_cdna Constitutive 0 NULL GeneID:523830 3 GENE GAL3ST2 NULL galactose-3-O-sulfotransferase 2 EMBV3_35021 CTCCTGACTGCTCTGATTCTTCCACGATCTTCAACTTCTCCATTGTGGTTGGGGTGCTGC Gene GeneID:507019|ADAM28:XM_002689784:5_cdna Constitutive 0 NULL GeneID:507019 8 GENE ADAM28 NULL ADAM metallopeptidase domain 28 EMBV3_32665 CCACATCCATCACTTCTTCTGTGATGTTAAGCCATTGCTGGAGTTGGCCTGTGGAAACAC Gene GeneID:785639|LOC785639:XM_002697386:37_cdna Constitutive 0 NULL GeneID:785639 23 GENE LOC785639 NULL similar to olfactory receptor, family 12, subfamily D, member 2 EMBV3_19501 TGGATAGATGTCCTTGTAGCTTGTTTTGTGCATGGTGGTTTGTGCCTCTTACACCGCCCC Gene GeneID:522103|STK39:NM_001075826:2_cdna Constitutive 0 NULL GeneID:522103 2 GENE STK39 NULL serine threonine kinase 39 (STE20/SPS1 homolog, yeast) EMBV3_22361 CTCAGACAAGTGGCTCAGGATTGACTCTTGGTTTCAAGGGATGGAATGGTCAGATTTTTG Gene GeneID:531254|COL24A1:XM_002686308:205_cdna UTR3_Alt 2 NULL GeneID:531254 3 GENE COL24A1 NULL collagen, type XXIV, alpha 1 EMBV3_42131 TCGCTCCCACAGTGCAAAGAAGACGCCGAGATATTTAGTCTTGGATATTGCAGATAATCC Variant GeneID:616825|STYX:XM_002690461:355_cdna 329^513 3 EMBV3_17662 GeneID:616825 10 GENE STYX NULL serine/threonine/tyrosine interacting protein EMBV3_17498 GCGGCAGCCCCCTGACAGCCAGTCTGTCGTGAATGCAGTCTATTCTACTCCAAGAGATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26133 TCTGAGGAGGTGGCAGAGATGCCAACAGAGGCTTGAACAAAGCGCAGACAAAGGTGACCA Gene GeneID:100271850|LOC100271850:NM_001145790:5_cdna Constitutive 2 NULL GeneID:100271850 7 GENE LOC100271850 NULL hypothetical protein LOC100271850 EMBV3_22981 CCTCTCGGGGCGCTCTTTGAGTCGATCTCGCAAAGAAAGAACGGAAACGCAAAATTCTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07594 CCTGTCTTGGGGACAGGCCCAGGAAGGGGTCAGTTAGGAAACCGGGCTTGACCTCAGTTC Gene BVV0101_051225 + 1 EMBV3_31993 GK000011.2:103823542-103840108 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38314 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20439 GGAAGTGCAAAGCAGCTGGTCCGTGGAGAACCCAATGTTTCGTATATCTGTTCTCGGTAC Gene GeneID:100337350|LOC100337350:XM_002684768:273_cdna Constitutive 0 NULL GeneID:100337350 1 GENE LOC100337350 NULL glycogen synthase kinase 3 beta-like EMBV3_42409 ATATGAGGAAGACATCCCGACACCAGGGCTCAGCGAAGTGACAGAGACCAAAGAAGAGGA Gene GeneID:100337374|LOC100337374:XM_002686585:55_cdna Constitutive 0 NULL GeneID:100337374 3 GENE LOC100337374 NULL period circadian protein homolog 2-like EMBV3_32025 ACTGTACACCTGCCACATCGGCAAGTTCTCCAACTGGACCAACGGCGCATTCCTCGCACA Gene GeneID:783235|IRX1:XM_002696450:47_cdna Constitutive 0 NULL GeneID:783235 20 GENE IRX1 NULL iroquois homeobox 1 EMBV3_31214 TGTGCTAGGAGGGGCAGTGGATTGTGTCAGGACCTCTGGAAATGTTTTTCCTCAGACGCA Gene BVT0102_081891 + 0 NULL GK000030.2:29928020-30922773 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250043 1 XLOC_152986 NonCoding TCONS_00250043 XLOC_152986 NonCoding NonCoding - X:30921605-30922491 - TSS187264 886 1 TCONS_00250043_1 47 0.137697516930023 1 0 0 0 0 4.68631744659603e-05 0 0 0 0 0 0 2.58373212460445e-06 0 0 0.000100875438683249 0 0 0 0.000424789355501476 0.000388492549005895 0.0003449616259926 0 0 8.28357648809908e-05 0 0 0.000699776067733469 0 0 0 0 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 4e-31 140 83.46 0.146726862302483 NR_024499.1 FMR1-AS1 Homo sapiens FMR1 antisense RNA 1 (FMR1-AS1), transcript variant 1, 6e-35 152 66.84 0.619638826185102 0 noncoding TTTATTTTTTTTCACTTTTTTTTTTCTTTCACCAATGTTTCACTAGCACTCAGCAAGCCGTCTGGCACATAGTTGTTGTTTAGTCACTAAGCCGTGTCTGACTCTTTGAGACCCCATGGACTGCAGCCTGCCATGCTGCAGGCTCCCCTATCCGTGGGATTTCCCAGGCAAGAATTGGAGCAGGTTGCCATTTCCTTCTCCACTGGCATAGGGTAGAGGCTCAATAAACTTCTCAGCGGAATACAAGCCTTCGAAAGGAAACCGAGGTCGAGGTGAATACAAGCATGGTGCAGAAGCAAAAATGTGAAAAATTTAGGGTTTGTTTTACTGTGAGGGGTAAGCGGGGAGAGCTGCAAAGAGGTGCACTGGCCCCTGTAGATAAGTCACCTCCAGTGCAAGGCGGGCATGTGGTAGGTGTGAAACAGTAGGGAAATTAACTGTAAAGAAATCAACGAGTGTTTAGCGCATTTTTTAAAACCTGTGTCAAAACGGTATGAAATAGAATAGAGGGAAGGGGAGCACGTGCGTCAGAGTTGCGTCTGAGGAAAGACATTTCCAGAGGTCCTGACACAATCCACTGCCCCTCCTAGCACACGGGGCGGCTCAAAATCTCCTGGGGAGGGGAGAGCATTACTGTCACCTTCTAAGGGTCACACAAGCCCGGTCACCACTGTTGCCACTGTTACCAGTTTAAAGTCTTCGTCAATCTAATGTTTCACCTCTATTCTTGTCTCCCACTCCACCTCCAGCTCCATTAGGCTCTGCCCCACTTAAAAACACAAAACAAAAACCACCTCCGACCCAAGCCAGTCCAGATCTGGAGAAGTGAACACTCTTGTTCGCTATGGGAGGCCCTTTCACACGCCCTTGGCTTGACCCCCAGCCC TCONS_00244028 TCONS_00244029 TCONS_00244030 TCONS_00244031 TCONS_00244032 TCONS_00244033 TCONS_00244034 TCONS_00244035 TCONS_00244036 TCONS_00244037 TCONS_00244038 TCONS_00244039 TCONS_00244040 TCONS_00244041 TCONS_00244042 TCONS_00244043 TCONS_00244044 TCONS_00244045 TCONS_00244046 TCONS_00244047 . 5' 283 TCONS_00244028 TCONS_00244029 TCONS_00244030 TCONS_00244031 TCONS_00244032 TCONS_00244033 TCONS_00244034 TCONS_00244035 TCONS_00244036 TCONS_00244037 TCONS_00244038 TCONS_00244039 TCONS_00244040 TCONS_00244041 TCONS_00244042 TCONS_00244043 TCONS_00244044 TCONS_00244045 TCONS_00244046 TCONS_00244047 . 5' 283 EMBV3_10754 GACATACAACTTACATAGCTGCCATTTGTGTACGTTTTGATAGTGTTACTACTGTCAGTA Gene GeneID:541168|SLC25A31:NM_001046500:56_cdna Constitutive 2 NULL GeneID:541168 17 GENE SLC25A31 MGC134063 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 EMBV3_34602 ATCCCTGGACATTCACTGGCTTGTGACGCTGTGGGATCTGTGACTAAACTATGGGCCAGA Gene GeneID:523745|RASGRP3:NM_001075848:29_cdna Constitutive 0 NULL GeneID:523745 11 GENE RASGRP3 MGC139060 RAS guanyl releasing protein 3 (calcium and DAG-regulated) EMBV3_37777 TCTCACCTTCACCTATTGCGGGCGAGCCGCTGCAGAGGGAGCTCCAGGCCCTGGCGGAGT Gene GeneID:789588|LOC789588:XM_002695066:446_cdna Constitutive 0 NULL GeneID:789588 18 GENE LOC789588 NULL similar to chromosome 9 open reading frame 3 EMBV3_04587 TGCAGTCAGAGGTACCAAAGGACAGCTTGAACCCTGAGCTCCAGGCTGCTAGCAACTCTT Gene GeneID:281715|CREB3:NM_174286:14_cdna Constitutive 0 NULL GeneID:281715 8 GENE CREB3 NULL cAMP responsive element binding protein 3 EMBV3_06064 CCTATCAAACTTACTCAAGTGGAACATCGCGTCGGATTTGAGTGGAATGAGGATGGGGCG Gene GeneID:281386|SERPINF1:NM_174140:22_cdna Constitutive 0 NULL GeneID:281386 19 GENE SERPINF1 MGC137338 PEDF serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 EMBV3_39981 CTCCAGTTCTGGCTTCTTGCCAAATCCCTACCTTTATCCCTCAAGCCTTGAGATATTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39437 TGATCAGTAGTGGGATCGCGCCTGTGAATAGCCACTGTACTCCAGCCTGGGCAACATAGC Gene BVV0102_345061 + 1 EMBV3_37438 GK000030.2:40740612-40794410 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27480 CAGGCCTATTCTTTACCAAGTGAGCTATAAGGAAAGCCCATCACCAACTCGATGGACATC Gene GeneID:100336669|LOC100336669:XM_002686267:91_cdna Constitutive 0 NULL GeneID:100336669 3 GENE LOC100336669 NULL guanylate binding protein 4-like EMBV3_35105 CCTCTGGGACCTCGAGTGCCTTCTCCAATTATTTCAACAGCAAAGTTGGCATTCCTCAGG Gene GeneID:509221|DAB2:XM_002696368:66_cdna UTR3_Alt 3 NULL GeneID:509221 20 GENE DAB2 NULL disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) EMBV3_09295 TTGCAGCTTCCAGAGACACCTCCATTTCTTGGCTTGAGGCTCTCTTCCTCCGTCTTCAAG Gene BVV0102_189075 - 0 NULL GK000016.2:4367255-4402473 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16508 GTAGAACAAAATTACACATGGTAAAACAGGTACCAGCACAACGTTAGGTTATATTACATC Gene BVV0102_058502 - 0 NULL GK000021.2:56645864-56800267 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34478 GATAAAGAATTTCCATCAGTGTTGTCTCTCCATTCGTGCAGTTTTCCAGCAGACGGTGGC Gene GeneID:519372|INTU:XM_002694358:124_cdna Constitutive 0 NULL GeneID:519372 17 GENE INTU NULL inturned planar cell polarity effector homolog (Drosophila) EMBV3_09173 ACACATCCAGGAAATAGTGGAGAAGTTTGGCTTGGTGTGTGTGACCCGAGCAGGGCATGA Gene GeneID:100337285|LOC100337285:XM_002685067:185_cdna Constitutive 0 NULL GeneID:100337285 1 GENE LOC100337285 NULL nicotinamide mononucleotide adenylyltransferase 3-like EMBV3_06930 AAGAGCTCGTGAGCGTGCCTGATGCCAAGTTCACCAAGGGCGAGTTTGAGGTGGTGATGA Gene GeneID:524694|LOC524694:XM_002698906:85_cdna Constitutive 0 NULL GeneID:524694 28 GENE LOC524694 NULL similar to Paladin EMBV3_12609 TTGCCTCTCCCATTGTCGTTGTGTGTTTTCCCTATTTATGTGCGGTGTGTCCTGGGCTTC Gene BVT0102_167297 + 0 NULL GK000018.2:34931934-34933169 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086038 1 XLOC_052021 Coding TCONS_00086038 XLOC_052021 Coding Coding KIAA0895L 18:34932155-34940108 = TSS64103 2779 1 TCONS_00086038_3 471 7 0.651408450704225 0.00381390762524507 9.40120450853288e-05 0.000185621185906075 9.86099487870866e-05 6.57343034678645e-05 0.000238444951682434 0.000151090937303349 0.000148985313711489 0.000556483894327792 0.00032353526866316 3.62447448070963e-05 0.000100361126421337 2.9942122027659e-05 5.41658064739247e-05 0.000143001979024671 0.000323135861099483 0.000448063477090026 0.000126402566535135 0.00036899629990478 0.000688348360545352 9.17603421227271e-05 0.000154875449355456 0.000264096745288743 0.000277500334727117 0.000785343441795249 0.000245918432934243 0.000588233593210596 0.000131341371981878 7.86100783204472e-05 8.87017811724408e-05 XM_005218537.1 KIAA0895L PREDICTED: Bos taurus KIAA0895-like ortholog (KIAA0895L), 0.0 4655 99.96 0.929471032745592 XM_005256116.1 KIAA0895L PREDICTED: Homo sapiens KIAA0895-like (KIAA0895L), transcript 0.0 2343 84.76 0.736595897804966 TCONS_00086038_3 sp|Q68EN5|K895L_HUMAN K895L_HUMAN Uncharacterized protein KIAA0895-like; 0.0 826 90.66 0.997876857749469 1 coding 0 0 0 0 0.00300300997863273 0.985289878246161 0.0157901475575256 0.805294420560911 GCGTCGGCTCCCGCGGGCTGGGCAGCCGGCGGCCTGTGTTGCGGAGCGGGAACAGCGGCGGCGAGAAGAGGATTGAACAGAAGTCGCCGGTGTGGGGAGCTGGAGTGACCCGGCCGGATGTGCCCTCCAGGACAGAATGGTGCTGGACTCAGGTGCTCAGGTGTATGAGCAGGCACCCCCCAGCCCGCCAGCCAGCCCCTCCTCCTTGGCCCATAGGCCGGGGCCCTCAGACCAAGATGGGACAGCGCTGTTCCCCTGGCCTCAGTCCCTGGCCCTGCCCCTGGCTCTGTCTGTCCCCTCAGCCCTGCGGCCCCGGGCGGAGAGGCAGCCCTTCTCAGAGCTGCACTTGGGCCGCCGTGGACACATGCGGCGCAGCGAGAGCACCTACACCGTGAACAGTACTGGCCGGCGGGGGGGCAGCACCCAGAGTTGGGCCCCGCCTGGACGGGGACGGGACCCAGGTGGGGGCACCCTGCGGCCCGCGGCCTCCCTGCCTCACATCGCTAAGGCTCGAAAGGAGGCAGGCCGTGGTGCCAGCAAGAGCCCCTGCATGTTGGTGGCTCTGCGGCCAACCAATATGGACCGCGAGCGGGACAAGTTCTTCCAGTCCCATTACACCTACAACCCACAGTTCGAGTACCAGGAACCCATGCCCACGGCTGTGCTGGAGAAATACTGTGAGGCCTCTGGACAGTTCATTCATCAGGCAGTTGGCATCATCGAGGCTGTCCTGGAGAAGTTTGGGACCTATGAACACTTTGAGGCTGCAACGGGGGGCCAGCTGCTGACCAAGTGCCAGATCTGGTCCATTGTGCGCAGATACATGCAGAAGGAAGGCTGCGTCGGTGAGGTAGTGGTGCAGCTGAGTGAGGACCTGCTGTCCCAGGCAGTGATGATGGTGGAGAACAGCCGACCAACGTTGGCCATCAACCTGACTGGAGCCCGCCAGTACTGGTTGGAGGGCATGCTGCGGCACGAGATAGGTACCCACTACCTTCGGGGCGTGAACAACGCGCGGCAGCCGTGGCACAGCGCCGAGGGCCGGCAGCAGTACGGGCTGCGGCCAGCAAACCCCACGGAGGAGGGCCTGGCCAGCCTGCACAGCGTGCTGTTCCGCAAGCAGCCCTTCCTGTGGCGCGCGGCGCTGCTCTACTATACGATACATCGTGCAGCACGCATGTCCTTTCGTCAGCTCTTCCAGGACCTGGCGCGCTACGTGCAGGATGCCGATGTGCGCTGGGAATACTGTGTGCGCGCCAAGCGCGGCCAGACTGACACCTCGCTGCCTGGCTGCTTCAGCAAGGACCAGGTATACCTGGATGGCATTCTGCGCATTCTGCGGCATCGCCAGACCATCGACTTCCCGCTGCTGACCTCTCTGGGCAAGGTTTCCTATGAGGATGTGGATCACCTCCGGCCCCACGGGGTGCTGGACAACACCCGGGTGCCCCACTTCATGCAGGACTTAGCACGCTACCGGCAGCAGTTGGAACACATCATGACCACCAACCGGCTGGATGAGGCAGAGCTGGGCCGCCTGCTGCCTGACTGATACTGGTTGAGGGCTCCAGATCGGCCCCCAGAACACGAAGCTGGCTGCTCTGTGCTTCCACAGCCTGGGTGTTTCTTGGGGCCTGGGGAGGGCAGAAGCATTTCAGGAGGGAGGAGCGGCAACAGCAGAGAATTTGTGCTAGCCTCCCTGGACCCCGAGGGCCAACAGCAGCATGTCAGGCAGACTAAGTCTGCCCTCCTGTCTCCAGCTGTCTGTTGAGCCGAGGAAGAGCCTGAGGACAGGAGGGAAGCTGAGCGTGGATGGGCATTGGGGGGAGGGGTTGGGAGTAGAAACTTGTTCTTGCATGAGATGGCTTTGGGTGTATGCGTACTCCAGTCTTTTCGTCCCCCCACCTGGCCCCTTGGTGCTCCTTCAGCTTTCACGCTGTCTACCTCTCACTGGGTCCTGGTGGGGATCTCCCTTCTCCTGGGGTGACTGCCTGAGCCTGCCGTCCTGGCTTTCACACAGACTCAAGGAGCAGGGATCCTGGTAGTAGAGACCCAGCTGGGCTGGGCTGTGCTTTCCAGCATTTTGCCTCTCCCATTGTCGTTGTGTGTTTTCCCTATTTATGTGCGGTGTGTCCTGGGCTTCTGAAAGTTCGATGGAGGGAATAGGGCTCCTCTGGAAGGCACTGAATGTTCCTAGCCCCGCCCTCCCTCACACATACACAGGCCTTGTGAGTCAAGCCGAGAGCTCCCCTGGCCTTGCCCTCAACCTCTGCACTGGCCTCTGCTGTCCCTGTCTTTGCTCACACCCTCGCAGCTGGTCTCTGGCAGAGGTTGGCATAGGCTGGCAGCATCCACAATCAAGCCTGAGGGGCAGGCCCCTAGTGGTTCCAAGTTCTGAGCCTCTCCTCAACCAGGAGAGGTGCCAAGATGATTGTTGCTTCTAGTTTCACCTCAGACTCAGCTGTGTGAGGTTGACCCAGCCCCGCTCCCACCCTTGGCCTTAGTTTTTCCATTCGAAAACTTGGACACACAGCTGGAAAGTCCTTATTCCTTTAGTCATTGAATATGTGTAGAGCACCTTCTGTGTACCAGTTAACTGGTCAGAATCCTCACTGAGCTCCCAGTCCTGAGAAAAGTCAATTAAAACAATTATAATGAAGTGTGTCGGCTTCATCTACTCACGATCACTTCCTCTCTTAATCTCCCTTCCCAAGCCCCTTTCCTGGCCCTTTGTGCCAGTGCTAGGGGCTTTCTGGGGTGGGGCTGGTGATGACACATG EMBV3_38064 GACTCTGGCCTGGTTGTCCCAAGTATTTCCTACGAGCTGCATAAAAAGCTGTTGGCTGTG Gene GeneID:517979|EDC3:NM_001031758:100_cdna Constitutive 0 NULL GeneID:517979 21 GENE EDC3 FLJ21128 LSM16 enhancer of mRNA decapping 3 homolog (S. cerevisiae) EMBV3_22182 GAGTTCTTCTCCAACTCAACAGACATCGAGTGGGAAAATGCCCAAAGTGGACTATGTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33936 AAAAGTTGACGATAGTGCTCTGGTTGAGTCCTCTAGGGAACTGGGCCTAAGCTGGTAAGG Gene GeneID:540781|TBCEL:XM_002693032:263_cdna UTR3_Alt 2 NULL GeneID:540781 15 GENE TBCEL LRRC35 tubulin folding cofactor E-like EMBV3_20418 ATGCATTATGATGTCTGTGGAAGGTTCTACTCCCGCTTGATCTCCAGCTTCGGTGAGCAG Gene GeneID:516526|CRYBG3:XM_002684681:49_cdna Constitutive 0 NULL GeneID:516526 1 GENE CRYBG3 NULL beta-gamma crystallin domain containing 3 EMBV3_13904 CTTGATATGGAAGCAGCCACAGGACAGGAGGTTCTCAGTTGCTTCGGGAGTTGAAAAAGA Variant GeneID:513461|PSMD11:NM_001046148:250_cdna 353^482 1 EMBV3_21322 GeneID:513461 19 GENE PSMD11 MGC137609 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 EMBV3_40903 GTCCTATGATACTACCTTCCTACTGGACCATGAGGAAGTTGCCTAAGTTTGGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_11798 TTTTTATTGTTTTAGATTTCTTTATTGTACTTCTTCTGGAAGTGTTAGTAATGCTACTTT Gene GeneID:514781|C7H5ORF15:NM_001035299:14_cdna Constitutive 2 NULL GeneID:514781 7 GENE C7H5ORF15 MGC127320 chromosome 5 open reading frame 15 ortholog EMBV3_15593 CTGCGCTACCCGAAGCACTATTATTTATTCTCCCTCTGCCTGTACCCTACTACTGTCAGC Gene GeneID:767818|PRC1:NM_001076543:144_cdna Constitutive 0 NULL GeneID:767818 21 GENE PRC1 MGC133883 protein regulator of cytokinesis 1 EMBV3_09359 GGACCCAATGAAGTCCACCATTTTGCTTGTCATGTGCCCCCACTATTGAAGTTGGCCTGT Gene GeneID:508140|OR10H1:NM_001077876:44_cdna Constitutive 0 NULL GeneID:508140 7 GENE OR10H1 NULL olfactory receptor, family 10, subfamily H, member 1 EMBV3_38247 CCCATTGAGGTATACTGCCATCTCCCAGTTATGTGTGAAGACCGGAATTTGCCATATGTC Gene GeneID:520891|NHP2:NM_001015626:26_cdna Constitutive 1 NULL GeneID:520891 7 GENE NHP2 NOLA2 NHP2 ribonucleoprotein homolog (yeast) EMBV3_35705 GGGTATCAGCGTCTACGGGCTGCTGGACCAGCCAACTGGACTTTATGAGTATAAGCTCAT Gene GeneID:513767|LOC513767:NM_001083681:23_cdna UTR3_Alt 2 NULL GeneID:513767 19 GENE LOC513767 MGC157333 phosphatidylcholine transfer protein-like EMBV3_12289 TTGTGCAGTTTCCCCCCAAGAGTCACATTGACCAGAAACTCACATGAAGAGCTGATCAGC Gene GeneID:523427|GINS1:NM_001083701:1144_cdna Constitutive 2 NULL GeneID:523427 13 GENE GINS1 MGC152152 GINS complex subunit 1 (Psf1 homolog) EMBV3_04878 CAAAAACTGGACTCTTCCTTTCTTCAGGTGAGGGTTGTCGGTTCTGTTTCTGCAAGCCAG Gene GeneID:282004|PRKG1:NM_174436:13_cdna Constitutive 0 NULL GeneID:282004 26 GENE PRKG1 CGKI cGKI-beta protein kinase, cGMP-dependent, type I EMBV3_10417 TTGGGATGACATCAACAACGTCGGACTCAGTGCGACAGGATGGCTGCGGACTGTGCTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23847 AAGCACTGATACGACAGGCAACAGACTTAGGGTGAGTAGAGGACAAAGACAGGATCCCAG Gene GeneID:535372|SGCB:NM_001102188:119_cdna UTR3_Alt 2 NULL GeneID:535372 6 GENE SGCB MGC155195 sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) EMBV3_38598 GGTTATATGCTGTCTCCAGTCTCCTGTCCCCACACCATTGTCCATGTCCACCTCTTGCTA Gene GeneID:540703|FOXJ2:XM_002687819:117_cdna Constitutive 0 NULL GeneID:540703 5 GENE FOXJ2 NULL forkhead box J2 EMBV3_07234 TCCTGACTGGTGCCCAGCAAAACTATGCCAGGAAACACACCATCCCCATTGATCTTCTTG Gene GeneID:517781|DNAH7:NM_001143874:113_cdna Constitutive 0 NULL GeneID:517781 2 GENE DNAH7 NULL dynein, axonemal, heavy chain 7 EMBV3_05327 TTGGAGGCCAAAGTGAGACCCAAAAAGCAGAGAGAGGTTGCTATTCATGCTCGCTATGTG Gene BVT0101_003310 + 0 NULL GK000025.2:14570640-14577129 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144611 TCONS_00144614 1 XLOC_088600 Coding TCONS_00144614 XLOC_088600 Coding Coding ABCC1 25:14439463-14572113 j TSS108531 6345 1 TCONS_00144614_7 1464 31 0.952400696575172 0.0020020485448727 0.00183128898709971 0.00146566700352825 0.00066668263703034 0.000540430653390246 0.000130490012511281 0.00033304353250591 0.000479009439138561 0.000552882062436191 4.94177377348264e-09 1.00427343085218e-08 1.5680063155678e-08 6.6194392296614e-05 0.000346798824878643 3.19627603899619e-08 1.15322037385142e-07 7.17194745602539e-08 5.43282578030112e-08 0.00107197495020217 0.00149320289465214 1.99078177565011e-13 3.18339426384054e-08 3.90634156039555e-08 7.15266563803248e-08 0.00131559617057631 0.00176800338464423 0.000255323947686247 4.20287597735843e-08 4.20761951241106e-05 2.02499006347514e-08 NM_174223.1 CFTR/MRP Bos taurus ATP-binding cassette, sub-family C (CFTR/MRP), member 1 0.0 8161 99.82 0.716154452324665 NM_004996.3 CFTR/MRP Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 0.0 6127 86.52 0.813396375098503 TCONS_00144614_7 sp|Q8HXQ5|MRP1_BOVIN MRP1_BOVIN Multidrug resistance-associated protein 1; 0.0 2997 99.80 0.99931693989071 5 coding 1 0 1 1 -2.50850566008391 0.0344859171596395 0.0136605762292888 0.77811902938502 CCACAGTGAGGGAGTGGGAGTGGTGTCTGCCTCTCGGGAGTTAGCTTTGCTAAGACGTAAGGGTTATATTCATTTCTCCTTCTTGATTCTGGAAACTTAGAAAAAAGCCTCTTGCCATCCTTAATGTGCAGTAGGGTTAGAGGAGAGCCTGGGGTGTTGAGAGAGGCATGCCACGTCTCATCAGGTCCACGAGGCCGGCAGTGGTGACTTGCATCCCAGTTTCAGAGATGCTGGGCTAGGAAAGCATGGCTGGCAGAGACTGTAGGATGCACTGATCGCGAGACGCAGATACCGCGTGAAGAAACACGGGTCTTCGAATCGATGCAGAGTGGAATGTCACGTGGAACACCAGCAACCCCGACTTCACCAAGTGCTTTCAGAACACCGTCCTCGTGTGGGTGCCTTGCTCTTACCTCTGGGTCTGCTTCCCCTTCTACTTCCTCTATCTCTCCCACCATGACCGGGGCTACATTCAGATGACACATCTCAACAAAGCCAAGACTGCCTTGGGGTTTTTGCTATGGATCGTCTGCTGGGCAGACCTCTTCTACTCTTTCTGGGAAAGAAGTATGGGCAAGCTCCTGGCCCCAGTGTTCCTGGTCAGCCCAACCCTCTTGGGCATCACCATGCTGCTTGCTACCTTTTTAATTCAGATCGAGAGAAGGAGGGGAGTCCAGTCCTCAGGGATCATGCTCACTTTCTGGCTTATAGCCCTACTGTGTGCCCTTGCCATCCTGAGATCCAAAATCATGACTGCCTTAAAAGAGGATGCCCGAGTTGATGTCTTTCGCGACGTCACCTTCTACATTTACTTTAGCCTTGTGCTGATCCAGCTCGTGTTGTCCTGCTTCTCCGACCGCTCGCCCCTGTTCTCCGAAACCATCAACGACCCCAATCCTTGCCCGGAATCCAGTGCCTCCTTCCTTTCCAGGATCACCTTCTGGTGGATCACAGGGATGATGGTCCAAGGCTACCGCCAGCCCCTGGAGAGCACCGACCTCTGGTCCCTGAATAAGGAGGACACGTCAGAACAAGTTGTGCCCGTCTTGGTAAAGAACTGGAAGAAGGAATGTGCCAAGTCCAGAAAGCAGCCGGTGAAGATCGTGTACTCCTCCAAGGACCCCGCCAAGCCCAAAGGGAGCTCCAAGGTGGATGTGAACGAGGAGGCCGAGGCTCTGATTGTCAAGTGTCCCCAGAAGGAGCGGGACCCGTCCCTGTTCAAAGTGTTATACAAGACCTTCGGGCCCTACTTTCTCATGAGCTTCTTGTTCAAAGCTGTGCATGACCTGATGATGTTTGCCGGCCCAGAGATCTTAAAGTTGCTCATCAACTTCGTGAACGACAAGAAGGCCCCGGAATGGCAGGGTTACTTCTACACGGCGCTGCTGTTCATCAGCGCCTGCCTGCAGACCCTGGTGCTGCACCAGTACTTCCACATCTGCTTCGTCAGCGGCATGCGCATCAAGACTGCCGTCATCGGGGCCGTGTACCGGAAGGCCCTGGTGATCACCAATGCAGCCAGAAAGTCCTCCACGGTCGGGGAGATCGTCAACCTCATGTCCGTGGACGCCCAGAGGTTCATGGACCTGGCCACATACATTAACATGATCTGGTCAGCCCCTCTGCAAGTCATCCTTGCCCTCTACCTCCTGTGGCTGAACCTGGGCCCCTCCGTCCTGGCGGGGGTGGCCGTGATGGTCCTCATGGTTCCCCTCAATGCTGTGATGGCCATGAAGACCAAGACGTACCAGGTGGCCCACATGAAGAGCAAGGACAATCGGATTAAGCTGATGAACGAAATTCTCAACGGGATCAAAGTGCTGAAGCTTTATGCCTGGGAGCTGGCATTCAAAGACAAGGTGCTGGCCATCCGGCAGGAAGAGCTGAAGGTGCTGAAGAAATCTGCCTACCTGGCCGCTGTGGGGACCTTCACCTGGGTCTGCACCCCTTTCCTGGTGGCCCTGTCCACGTTTGCCGTCTACGTGACCGTCGACGAGAACAACATCCTGGATGCCCAGAAGGCCTTCGTGTCCTTGGCCTTGTTCAACATCCTCCGCTTCCCCCTGAATATCCTCCCCATGGTCATCAGCAGCATTGTGCAGGCGAGCGTCTCCCTGAAGCGCCTGAGGGTCTTCCTGTCGCACGAGGACCTGGACCCTGACAGCATCCAGCGCCGGCCCATCAAAGACGCTGGAGCCACGAACAGCATCACCGTGAAGAACGCCACGTTCACGTGGGCCAGGAATGACCCCCCCACGCTGCATGGCATCACCTTCTCTGTTCCGGAAGGTTCCCTGGTGGCCGTGGTGGGCCAGGTGGGCTGTGGGAAATCGTCTCTACTCTCAGCACTCTTGGCCGAGATGGACAAGGTGGAGGGACACGTGACTGTCAAGGGCTCAGTGGCCTACGTCCCACAGCAGGCCTGGATTCAGAACATTTCTCTCCGAGAAAACATCCTTTTTGGACGCCAGCTACAGGAACGGTATTATAAGGCTGTGGTAGAAGCCTGTGCCCTCCTCCCAGACCTGGAAATCCTGCCCAGTGGGGACCGGACAGAGATTGGTGAGAAGGGTGTGAACCTGTCCGGGGGCCAGAAGCAGCGCGTGAGCCTGGCCCGGGCCGTATACTGCGACTCAGACGTCTACCTCCTCGACGATCCCCTCTCAGCCGTGGACGCCCACGTGGGCAAGCACATCTTTGAAAACGTGATTGGCCCCAAGGGGCTTCTGAAGAACAAGACACGGCTCCTGGTCACGCACGCCATCAGCTATCTGCCCCAGATGGATGTCATCATAGTCATGAGTGGCGGCAAGATCTCCGAGATGGGCTCCTACCAGGAGCTATTGGCTCGGGACGGCGCCTTCGCCGAGTTCCTGCGTACCTATGCCAGCGCGGAGCAGGAGCAGGGGCAGCCGGAGGACGGCTTAGCAGGTGTCGGCGGTCCAGGGAAGGAGGTGAAACAGATGGAGAACGGCATGCTGGTGACAGACACTGCAGGGAAGCAAATGCAGAGGCAGCTCAGCAGCTCCTCCTCCTACAGCGGGGATGTGAGCCGGCATCACACCAGCACCGCCGAGCTGCGGAAGCCCGGGCCCACGGAGGAGACCTGGAAGCTCGTGGAGGCAGACAAGGCTCAGACGGGGCAGGTCAAGCTCTCCGTGTACTGGGACTACATGAAAGCGATTGGACTTTTCATCTCCTTTCTGAGCATCTTCCTTTTCCTGTGTAACCACATGGCTTCCCTGGTCTCTAACTATTGGCTCAGTCTCTGGACGGATGACCCCATTGTCAACGGGACCCAGGAGCACACGCAAGTCCGGCTGAGTGTCTATGGAGCCCTGGGCATTTCACAAGGTATCACGGTGTTCGGCTACTCCATGGCCGTGTCCATCGGGGGCATCTTCGCCTCCCGCCGCCTGCACCTGGACCTACTGCATAACGTCCTCCGGTCGCCCATAAGCTTCTTCGAGCGGACCCCCAGCGGGAACCTGGTGAACCGCTTCTCCAAGGAGCTGGACACGGTGGACTCGATGATCCCGCAGGTCATCAAGATGTTCATGGGCTCCCTGTTCAACGTCATCGGCGCCTGCATCATCATCCTGCTGGCCACGCCCATGGCTGCTGTCATCATCCCGCCCCTGGGCCTCATCTACTTCTTCGTGCAGAGGTTCTACGTGGCCTCCTCCCGGCAGCTGAAGCGCCTGGAGTCGGTCAGCCGCTCGCCGGTTTATTCCCACTTCAACGAGACCTTGCTGGGCGTCAGCGTTATCCGCGCCTTCGAGGAGCAGGAACGCTTCATCCGCCAGAGCGACCTGAAGGTGGACGAGAACCAGAAGGCCTACTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCGTGCGGCTGGAGTGTGTGGGCAACTGCATCGTCCTGTTCGCCTCGCTGTTTGCCGTGATTTCCCGGCACAGCCTCAGTGCAGGCTTGGTGGGCCTCTCGGTGTCTTACTCCCTGCAGGTCACCACATATTTGAACTGGCTCGTTCGGATGTCGTCCGAGATGGAGACCAACATTGTGGCCGTGGAGAGACTCAAGGAATATTCGGAAACTGAGAAGGAGGCTCCCTGGCAAATCCAGGATATGGCACCGCCCAAGGACTGGCCCCAGGTGGGCCGAGTGGAGTTCCGGGACTACGGCCTGCGGTACCGAGAGGACCTGGACTTGGTTCTGAAGCACATCAACGTCACCATCGACGGTGGGGAGAAGGTTGGCATCGTGGGGCGGACAGGAGCCGGGAAGTCATCCCTGACCCTGGGCTTGTTTCGGATCAAAGAGTCAGCCGAGGGAGAGATAATCATTGATGACATCAACATCGCCAAGATCGGCCTGCATGACCTCCGCTTCAAGATCACCATCATCCCCCAGGACCCTGTTTTGTTTTCGGGTTCCCTCCGCATGAACCTGGACCCGTTCAGCCAGTACTCGGATGAAGAGGTCTGGACGTCCCTGGAGCTCGCCCACCTGAAGGGCTTCGTGTCGGCCCTTCCCGACAAACTGAACCACGAGTGTGCGGAAGGCGGGGAGAACCTCAGCGTCGGGCAACGCCAGCTTGTGTGCCTGGCCCGGGCCCTGCTGAGGAAGACGAAGATCCTCGTGTTGGACGAAGCCACGGCGGCCGTGGACCTGGAAACGGACGACCTCATTCAGTCCACCATCCGGACGCAATTTGATGACTGTACCGTCCTCACCATCGCTCACCGGCTCAACACCATCATGGACTACACGAGGGTGATCGTCCTGGACAAAGGGGAGATCCAGGAGTGGGGCTCCCCCTCTGACCTCCTGCAGCAGAGAGGTCTCTTCTACAGCATGGCCAAAGATTCTGGCTTGGTGTGAGCCTGGAGCGGGTACAGCTGGTCAGAACTGCAGGGCCGACCTGCCAGCAGTCAGGGACGAGTCAGCATCCCTGGGAACCCAAGCCTCTCATAGACTGAAACCAAAAAGAAAACCCCCAAAACCAAAACACACACAGAGCAGCGGCCCTCTGGCCCTTTTCCCTGGAACTGGCCATGAGGACATGGGAGAGACGCTGGGATGCAGCTCCCCCCAACAATGCACACGCCCTCGGCTCAGTTATCTCCTGCAGATGCACACACGTTCTCACGCCCCTGGGAGGGCACGCATGTTCTCCCTGCTCTGTGGGGACATTTGGGCCACCAGACTTCCAGAGAAACCGGTTGCGTAAAATCTGCTAGTGACCAAATCCAGCCAACTGCCTCATGTCTCTCCAGCTGAAGTCTGTGGATTCTGCGCCTTGGGGAAGCTCGCTGGTCCCCGGCACCTCTCCGTCCTTGTCTGGCTTCCCCTAGATGCTTGTTTCCCCAGGGCTGCAATTGGAGGTGAGGGGCTTAGTGAAGCCCATGCTCACCCTCAGGCAGTGTCCCGAGGACCACCGACAGCCCTCTCACCAGCCATCTGGTCTACGAGGTCCTCAGCTGCTGGGAACCAGCCTCCTAGCCCTGCCTCCAATGGGACTTGCTGTCTGGACTCCGAGTGACCGGGCCTGGAGGTCCAGGCTGGGAGAGCCCTCTCAGTGCCGGCTTCCCCGCTTGGCTGCTCACCTCCTTACCCACCTCAGTCTTTGCCTTCCTCCCTCCGTCTTTTTACCCACAGCTAGAATGGGTTTACGCCTCCAGGTGCCTGAGAATGAAAACCTGCTCATAGTTAACGAAGCGTTCTAAGCCAAGAGCGCCAGTCCCTCCAGGTGGGAGCAGCTGGTACTGAAAAGAGCCCCTGTGAGTCTCCTCCTCATTTGTAGATTTCAGTTTCTCACCGGGGGCCACTGGTTCACTGTCAAAGCCGGCACGGTGGATGACTTGACTTACGGTTACTGAGTCTCTTCTGAGACAAGAAAAAGCCCTTTTCACAAGGGTCAGTGATTTTCTTTCTTTTTTTTTTTTTTTTTAAAGTACTGCTCCAGGGAGATGAACAGTCTCAAGACTTTAATTTCTTGGGAGGAAGCGTTAGGCTGAAGACTGGCACCCCAGGGAATGGCCAGGTTGGTCCAGCATCTGGAGGTTGGGGGCTGTCTTCTCAGCCCTGTAGGTCCCTCAATTGGAGGCCAAAGTGAGACCCAAAAAGCAGAGAGAGGTTGCTATTCATGCTCGCTATGTGAATTACATTGCTGACTTCAAACCAGAGAAGCATCTGTCTCCTTTTAGGTGAAAATATATATTTATTTTTTGTAAGTTAAACCATTCTTTCACATTAGATAAACCAAGTGTTTCTTGGGGATCTTTTTGTAATGACTTACACTGGAAACGTGAACATTTGCAAATAATTTGCAGTAAAAAAAGAAAAATTTTATTTC EMBV3_26041 GGAGCTGAAACTGGAAGAACGGAAAGCCAGACTACAATTTACTGAGCTCCTCCCTGAAGA Gene GeneID:507206|MGC152111:NM_001080235:47_cdna Constitutive 1 NULL GeneID:507206 1 GENE MGC152111 NULL hypothetical LOC507206 EMBV3_23851 CTCGCACCCCCACCTGTACATCCCATACTCCGTCTTCCAGGTCTGGGAAATATCCATTTT Gene BVV0102_168054 + 0 NULL GK000004.2:107554737-107559653 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14309 CTTTCAGTCAAAGGGTTGGGGAGTGCCAGGGGAAGAGGGGGAAATCTGGATTTATAAGTA Gene GeneID:532881|FGFR1OP2:NM_001102147:14_cdna UTR3_Alt 4 NULL GeneID:532881 5 GENE FGFR1OP2 MGC143105 FGFR1 oncogene partner 2 EMBV3_00267 TAAGCCTAGAAATGACTTGTTCACCGAGGCTTCCAGAAAAGAACATAGACCTGCCTACAC Gene BVT0102_164599 + 0 NULL GK000011.2:55998901-56493376 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08936 CTTCATGCCGCTGTAACTATCTCCGGCAAAAGGAAACATTAGACTTCAACGCGGAAAGAG Gene BVT0102_208936 + 0 NULL GK000018.2:56671419-56672749 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087126 1 XLOC_052359 Coding TCONS_00087126 XLOC_052359 Coding Coding PNKP 18:56666457-56675985 j TSS64727 4029 1 TCONS_00087126_8 522 0.032017870439315 20 0.579195969350268 0.00206592494081364 0.000965564714388124 0.00134178357102776 0.000905949208174036 0.00179288655765949 0.000236185540213927 0.000536366596639193 0.00120771685583238 0.000647318730380761 1.32028460408893e-05 0.000126357153556601 4.98970908982607e-05 5.77591835230113e-05 0.000212763200543653 0.000281202430845703 0.00186734726386301 0.000480413973407761 0.00197385816111528 0.0014892502679189 0.00112228464170422 0.000826533763818656 0.000858326397306538 0.00015312471132419 0.000976176418596376 0.00155155056521433 0.000368990171682717 0.000270286969227449 0.00010721190700999 0.000259775971250973 6.57130543420311e-05 XM_005219259.1 AKT1S1 PREDICTED: Bos taurus AKT1 substrate 1 (proline-rich) (AKT1S1), 0.0 2266 100.00 0.311491685281708 NM_007254.3 PNKP Homo sapiens polynucleotide kinase 3'-phosphatase (PNKP), mRNA. 0.0 1965 85.90 0.420203524447754 TCONS_00087126_8 sp|Q96T60|PNKP_HUMAN PNKP_HUMAN Bifunctional polynucleotide phosphatase/kinase; 0.0 915 85.25 0.998084291187739 3 coding 0 0 0 0 0.132707432991428 0.408766517479694 -0.0508898241478538 0.528460077539363 GATGCTTTCTAGAGACTGGACTGTAACATTAGGGTTTTGAAGAGACTCTTTGTGATGGACGAGGACACCACGCTGCAGGACCTACCCCCCTTCTGTGAGTCAGACCCCGAGAGCACGGACGATGGCAGCCTGAGCGAGGAGACTCCTGCTGGCCCCCCAGCTTACTCGGTGCCCCCGGCCTCAGCCCTGCCCACACAGCAGTACGCCAAGTCCCTGCCTGTGTCCGTGCCCGTCTGGGCCTTCAAGGAGAAGAGGACAGAAGCTCGGTCGTCCGATGAGGAGAACGGGCCGCCCTCTTCGCCGGACCTGGACCGTATCGCGGCGAGCATGCGCGCACTGGTGCTGCGGGAGGCCGAGGACACTCAGGTCTTCGGGGACCTGCCGCGGCCACGGCTCAACACCAGCGACTTCCAGAAGCTGAAGCGGAAATACTGAGGCCCAAGGAGCTTCCCGGCCCGGCGTCCGTCCCACCCTTACACTACACCCCTGCCCCGCCCCCGGGGCCAGCCAATCCGAGTCAGATCCGGGACCGGCCTCCCACCCCCGGGCCACCAGGATTGACCAGTTCCTGCAGATTCCCGCCACCCTTCCAGCCCACGATAACTCCCGCGCCGCCGAACGGGGCCTATCCAGTTTCCGGATTGGGTCTGTCTGCTCTCTGCCCAGCAACAGACTTTTTTCTAGTAAGGAATTGGCTCGCTCCGCGACCGGGGCGTGGCTAATTCGCAAGGCTTTGGCTCCATTCCCGAAAGTCAAGCTCCAGGATTGGGGGTAATGGTCCTCCCCTTCAGCATAGCGAATGGACAGCTCCTTCATTTGATTGACTTGAACACTGTAAAGGGCTTGACCAATCTCCCGAGAGGCTGAGTTCCCCCATTTGATTGGCTCTAGCCTCCTGGGGGCGTAGCCAACTCCTCCTGTGCCCAGGATTGGCCTGTGGCGTTAAATTTACGTTCTTTACACTACTGGGGCTGGGGTTGGTTTTCGCCGAAGTCCTGACAATTGTCCCTCTGGCACCCTCAGGGATGGCCTGACCCGGTTCTTGCGTCTGACACCCTCTCATTGGTTACATCCCACAACTGCCTGCCAATCAAACCCGTCCTTGCATCCAGGACGTTACCAGCTCCCGCCCCTCTCCCCCCACCCCCACAGGTGCCTTAAAGGGCCCTCGTCCACCCAAGGTGGGGGGCAGGGGGCCTCACTCTCCGGCCCTGGTGTTGGGGGGAGAGAGTCGGGGGTGGGGATCGGGAGTTGGGAGGGGCGCTCTGAGATTAAAGAGTTTTACCTCTGACAAATGAATATGAAGTGTGTTCTGGGTATTCATTCAACATTTTTCGAAGCCAAATGAGCAGGTCTCATTGCTTCTCAATGTAAAGTTGGGAATTGGGACTCGTCCCGATTTCACAGATAAGAAAAGGTAGATACACAGGGTGGAAGAAAGGATTCCATTCCTGTGTGATCGTGGAATCCCAATCTTCAGGGCTGTAAATTTCGGAATAAGCGTAGTTTTGAGTCGGTCTCCTGAGCCCACATGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACCCCGTGCGACCCCCATAAACGGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGCTGAGCCCACATAGTGCCCAGGAACCCCCAGCTGAGGCCGGGAGGTTTCGGACTAATGTAAGACAGCTGGAGGTAAAAGAACAAACGGCTCTGGTCTGAGGATGCAAACGCGGAATCCCCGTCTCCCATCAGATCACCACCGATGGAATGCTAACGACAAGACTTCAACAGGGTAAACTATTACCTAGACAACTTTACAAATTATTTACATGTACTAACTCTATCTTTTACAACTCTAACTTTACAAATTATTTACATGTACTAACTCTATCTTTCCTTCCACAAAGTGGAAACGATTATCCTCACACTAGACGAGAAAACTGCAGCATTGCTGTCCCGACGGGGTTTCGTCAACTGACAATAACCTTAAAGAGAACTTCATGCCGCTGTAACTATCTCCGGCAAAAGGAAACATTAGACTTCAACGCGGAAAGAGGAAAATCTGTGAGCATGGAATCCACTCCCCCCTACAGGCCTGAGTCTCATACTGCAGCAGAGGAGATGAAGGTCAGAGCTGCAGAGGGACCTTAGGGTGCCTGGGCCTGAGAGGGCGGGGCTTATGCCGCAGCGGCGCCAATGCCCCGCCCACCTCGGTAGGAAGAGTCATTTCCGTGGGCGGAGAGACAGCAGCCAGCCGAGTCGCCGGCACAGCGCCTCCGGCAAGCCCTCCCCGGTCGGAAGTGGCGAATGAACCAAGCGGTGGGCAGGGGCCGACTCCCAAAATGGCCAGGGTGGAGACCCAGGGTCGCCTGTGGCTGGAGAGCCCCGCTGGGGGAGCGCCTCCCATCTTCCTGCCCACAGGAGGGCAAGCTCTGGTCCTGGGCCGGGGACCCTTGACGCAGGTTACCGACCGGAAGTGCTCCCGAAACCAGGTGGAGCTGGTCGCTGACCCTGAGACTCGGACGGTGGCAGTGAAACAGCTGGGAGTTAACCCCTCAACTGCCGGGACCCAGGAGCTGAGACCGGGTTTGAAGGGCGCACTGGGGGTGGGGGACACGCTGTATTTGGTCAATGGCCTCCACCCGCTGACCCTGCGCTGGGAAGAGGCCCTCACTCCAGAATCCCAGCCAGACACTCCACCCAGTACCCCTCCCGTGACCCGAGAGGGAGAGGAGGAAAATGTTGAGCAGCAGAAAAAGCGGATAAGGAAGTCATCCCCTGGCTGGGAGACCTTCGAGAAGCTGCTGGTGTTCACAGCACCTGGTGTGAAGGCTCGGGGCAAGGTGGCTGGTTTTGATCTGGACGGGACCCTCATCACCACACGTTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCTTGTACCTAGAGATTCCGCGGAAGCTCCGGGAACTAGCCGCCAAGGGTTACAAGCTGGTGATCTTCACCAACCAGATGGGCATCGGGCGCGGAAAGCTGCGAGCGGAGGAGTTCAAAGCTAAGGTGGAGGCTGTGGTGGAGAAGCTAGGGGTCCCCTTTCAGGTGCTGGTGGCCACGCACGCAGGCTTGTACCGGAAGCCAGTGAGCGGCATGTGGGACCACCTGCAGGAGCAGGCCAACGAGGGCGTGCCCATCTCCATCGGGGACAGCGTCTTTGTGGGAGACGCAGCGGGACGCCCAGCCAACTGGGCCCCTGGGCGCAAGAAGAAAGACTTCTCCTGTGCAGACCGCCTGTTCGCCCTGAACGTGGGCCTGCCATTCACCACACCAGAGGAGTTCTTTCTCAAGTGGCCCGCGACCCGCTTCGAGCTCCCAGCCTTTGACCCGAGGAGCGTCGCCCGCTGTGGGCCTCTCTGCCTCCCCGAGTCCAGCTCCCTCTTAAGCTCAGACCCGGAGGTGGTCGTCGCCGTGGGATTTCCTGGGGCCGGGAAGTCCACCTTCCTCCGGGAGCATCTCGTGTCAGCCGGATACGTCCACGTGAACAGGGACACTCTGGGCTCATGGCAGCGCTGTGTGACCGCATGTGAGGCAGCCCTGAAGCAGAGGAAACCGGTCGTGATCGACAACACAAACCCCGACGTCCAGAGCCGGGCCAGGTACATCAAGTGTGCCCGGGATGCGGGCGTGCCCTGCCGCTGCTTCCTCTTCAGTGCCACCGTGGAGCAGGCGCGCCACAACAACCGGTTCCGGGAGATGACAGACTCCTCCCACGTGCCCGTGTCCGACATCGTCATTTATGGCTACAGGAAGCAGTTCGAGGCCCCCACGCTGGCTGAAGGCTTCGCGGCCGTCCTGGAGATCCCATTTCGGCTGCATGTGGCACCGCAGCTCGAGCGGCTGTACCGCCAGTTCTCAGAGGGCTGAGCCATCCTGCACCGCACCCCCCCACCCCCCACCCGGCCCTCGCCCCTCACCACAATAAATGCTATTTTTCCTAA EMBV3_39209 AATGGGATGTCAAGTTCACTACCACCCAGTGGCGAGAGGAATCCGGAGGTGAGGCTTGCA Gene BVT0102_133916 + 0 NULL GK000002.2:106548506-106627005 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19246 CCTTGGCTTTGGGTGGCTGTGAATTAGCACCAAGGGCTCCCTAAGGCATCTTGTCTGTAA Gene GeneID:282068|SFRP1:NM_174460:32_cdna Constitutive 0 NULL GeneID:282068 27 GENE SFRP1 NULL secreted frizzled-related protein 1 EMBV3_04642 GTGTCAGGCATCAACATCATTCTGCCCAGTCTCACCATCTTTGTCTCTGATGGCCTCATC Gene GeneID:531816|LOC531816:XM_002699157:30_cdna Constitutive 0 NULL GeneID:531816 29 GENE LOC531816 NULL similar to olfactory receptor Olr1242 EMBV3_19015 GCACAGTCGGGTGGAAGGGTCAGATTACGTCACCTCTTGCTCTTGTAGATGCGAATCAGT Gene GeneID:515218|SAPS3:NM_001105372:284_cdna Constitutive 1 NULL GeneID:515218 29 GENE SAPS3 NULL SAPS domain family, member 3 EMBV3_38776 TGAACAACAAAGTTTTATTGCCCAAGGTTCTGGAGGCTGGAGGCCCTAGATCTGGACCAG Gene BVT0102_015553 + 1 EMBV3_20293 GK000024.2:43209176-43217468 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142787 1 XLOC_087212 NonCoding TCONS_00142787 XLOC_087212 NonCoding NonCoding - 24:43216162-43216983 - TSS106998 821 2 TCONS_00142787_1 55 0.559074299634592 1 0 0.000430874959238152 0.000122392697266903 0.000135259360179459 0.000434931722759634 0 5.66403782455907e-05 3.55159430219309e-05 0 0 0 0 4.35529768191326e-06 0 0 0 0 0 0 8.73438179249147e-06 0.000105112370888952 0 0 0 0 0.000135025231519258 0.000351845329339741 0.000299737486078572 0 0 0 XM_002697805.2 LOC100336584 PREDICTED: Bos taurus cell death-inducing DFFA-like effector a-like (LOC100336584), transcript variant X1, mRNA. 2e-148 529 100.00 0.355663824604141 NR_001544.2 NCRNA00185 Homo sapiens non-protein coding RNA 185 (NCRNA00185), non-coding 2e-08 64.4 70.62 0.186358099878197 0 noncoding CAGATAAAAAACAAGCAATTATGTCAAAATATTAAAGGCTGGCTGAATCCAGGCACTGCGTATAAAGATGCTCATGGCATGTTCTCTCTATACATCTTTATATTTGAAATTTTTTGCAATAAAATGTTTTTTTAGAGGTGAGTTGAATTGAACTGATTGGACCCACTGTCTCATTGTCAAGCTGGTGTCCAGTCCAGTGGGGCTGCTCCGACAGAGTGCTGGACACCAGTGGTTTATTATGAACAACAAAGTTTTATTGCCCAAGGTTCTGGAGGCTGGAAGCCCTAGATCTGGACCAGCAGGGCCCAGTTCTGGTGACACCACCTCCTGGTTCACGGCAGACAGTCCCTTCCCTGTGTCCTCAGAAGGCAGAAGGGGTGAGGGAGCTCTCTTAAAAGGACAGTAACTCCATCCATGGGGTAACTGGCCTCATAACCCCATCACCCACCCCCTACCCAGGCCCACCTTGTAAAGCTAGCACACTGGCCATTAGGAGGTCAGTACATGAGTTGTGAGGGGTATACAACATTCAGGCAACTGGCAGGGGGCGAGGTTCAGATGGGGCTCTGGGCCTGAACCCCCGTCGTCCGCCAAGGCTGGAACCCCGCAGGCCCCGGGGATGCCAGGACTCTGGAAGGAGATTGCTTTTGGCCCCACATTTCCCTCGGTGACACCATGAGCCTCGGGGCAGGACGGGGGAGGAAGAGGAGGAGTAGGAACTCGGGCAGCAGGGCCAGCTGTGCAGGTCACGTGAGTCCGGGGACGGAGGCAGAGGTCAGGCGGCAGATGTCAGGCGACAGCGCTCTGGGAGCCGGCTCCGC TCONS_00139071 . 5' 486 TCONS_00139071 . 5' 486 EMBV3_21694 CCTATGAGGTGCTTCCCAAACCCCCCTTTGCCGCAGATCACTCTTAGACTTCAGATCCAT Gene GeneID:767831|ZNF668:NM_001076953:413_cdna Constitutive 0 NULL GeneID:767831 25 GENE ZNF668 MGC134102 zinc finger protein 668 EMBV3_32862 GAAGCCGCGTGAAAATCGCAGTGGTTGAAGGTTATTGGCAGAGGCTCCCTAGAAGCAGTT Gene GeneID:509847|CBLN2:NM_001098919:79_cdna Constitutive 0 NULL GeneID:509847 24 GENE CBLN2 MGC140192 cerebellin 2 precursor EMBV3_27755 CAATCCCCCTGCGTCTCCCAGGCTAGGCAACGCCCCCGGCCTTGGGTCCCAGTGACAAGG Variant GeneID:786606|WIPF3:XM_002686848:66_cdna 465^706 1 EMBV3_39556 GeneID:786606 4 GENE WIPF3 NULL WAS/WASL interacting protein family, member 3 EMBV3_23345 GGTCTACTACACGTACACCAAATAACGACAGCCGCTCTTCCCCACTCCAGCAAATCAGCA Gene GeneID:527669|SLC25A35:NM_001031763:66_cdna Constitutive 0 NULL GeneID:527669 19 GENE SLC25A35 FLJ40217 MGC149001 solute carrier family 25, member 35 EMBV3_17849 CTGCCTAATGTCCAGCTACTTAATGGAGAGATAGTAGAGCCTGCCAATCACAGCATGTAC Gene GeneID:520771|AVIL:XM_002687555:569_cdna Constitutive 0 NULL GeneID:520771 5 GENE AVIL NULL advillin EMBV3_32358 TCAAGAGAAGAAACGGTCAAGACGAACAGCACAGGGTATCTCCCATTTCCCAGCCTCTGG Gene BVT0101_021665 - 1 EMBV3_38866 GK000020.2:6239994-6355833 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11528 AGAGACGCCCACAGCGGGTACCAGACGGAGAACACCCCTGAATATACACAGCTGTACACA Gene BVT0102_189476 - 1 EMBV3_13672 GK000005.2:57400282-57416302 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20200 CATCGAGGAGGTGGATGAGGATGGCAGCGGCACCATCGACTTCGAGGAGTTCTTGGTCAT Gene GeneID:615428|TNNC2:NM_001076373:1297_cdna Constitutive 0 NULL GeneID:615428 13 GENE TNNC2 STNC troponin C type 2 (fast) EMBV3_17043 AGGAGATGGAAGCGAGGCCAAGGAGTCAAAGCAGAAGGAAGGTTAAATCTGATTAATTTC Gene BVV0102_137602 + 0 NULL GK000009.2:73661545-73936387 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25085 AGCATCCTCAGTGAGCTGCCCAGATACAGATGATGAGATTGTGAGAATGATGGGTTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00881 GAGACGGCCGTGCTGACAGATCCGCTTCAGGGTGTTGTCATACAGCAGAAGATGAACAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03748 GTCCCGCCCAAGCTTGCTGGTCACTGGGAGGTGGCCTTGTACAAGTCGGTGCCAACGCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23661 AGGGTATTAGACCTCTCTTGCTCTGCCTGGCCCTGATGCTGTCACTCTGGCTCCATGACT Gene GeneID:507672|FOLR2:NM_001075325:4_cdna Constitutive 0 NULL GeneID:507672 15 GENE FOLR2 MGC140657 folate receptor 2 (fetal) EMBV3_42619 GAAAGCCCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCCTACCATGGCT Gene BVV0101_035580 + 0 NULL GK000003.2:82582194-83298912 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03312 CAGTCTAAAAGAACTCCTCCCTCTGGGATAAGCCGAAGAAAAGCAATTTAGGTTTCACTG Gene GeneID:784749|ANKRD27:NM_001102532:799_cdna Constitutive 2 NULL GeneID:784749 18 GENE ANKRD27 MGC166150 ankyrin repeat domain 27 (VPS9 domain) EMBV3_43639 CAGAGAAGACAATGATCTTGATTCCCAGGTTTCTCAGGAGGGTCTTGGCCCAGTTCTGCA Gene GeneID:506895|HAX1:NM_001045953:97_cdna Constitutive 2 NULL GeneID:506895 3 GENE HAX1 MGC137143 HCLS1 associated protein X-1 EMBV3_19890 GCACTGATAGTGATAACAGAATTGAAACTGATGCAGGAAGTGGCAAGAAGGGAGATGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06237 TGAGTAAAGGATTAAGGGATGTCCACTCCTCCCTCTTTTGGGACAAGGGAGACACTGCAC Gene GeneID:618343|C19H17orf62:NM_001078087:150_cdna Constitutive 1 NULL GeneID:618343 19 GENE C19H17orf62 C17orf62 chromosome 17 open reading frame 62 ortholog EMBV3_33202 TTTACCCCTTTCCTGGTCATCCTTGGTTTTCTCATCTCGTGTGTCCTGACCACCTATCCC Gene GeneID:512148|LOC512148:XM_002696578:1_cdna Constitutive 0 NULL GeneID:512148 21 GENE LOC512148 NULL similar to myeloid-associated differentiation marker EMBV3_09168 GACAGTCTGAAGAGCCCTACCTCTATTGCAGAAATTATCAACCCTGCTGCCTCCCTTTCT Gene GeneID:767957|DEFB119:NM_001101661:1366_cdna Constitutive 0 NULL GeneID:767957 13 GENE DEFB119 BBD119 MGC133603 defensin, beta 119 EMBV3_21190 GAAACGGCACTCGGAACTCTACCACGAGCTCAACCAGAAGTTCCACACTTTCGACCGCTA Gene GeneID:506672|LOC506672:XR_083606:415_cdna Constitutive 0 NULL GeneID:506672 2 PSEUDO LOC506672 NULL similar to brain-specific angiogenesis inhibitor 2 EMBV3_17565 GCATTGCCAGGATTGTCCTCCGGAAATGTCTTTGGATTTCTGTGATTCTTGTTCAGACTG Gene GeneID:538498|ZZZ3:NM_001102215:80_cdna UTR3_Alt 2 NULL GeneID:538498 3 GENE ZZZ3 MGC160076 zinc finger, ZZ-type containing 3 EMBV3_02145 CTGACACGACTACATCCGGTTCACGAATAGGGGGCACCACACCCGGAAGTAACTTATTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15647 TAGGTCTGGCTTTGGGCTCAGTGATCTGTATTTTTGTCAAGTATTTTGGGTCAGTCTTCT Gene BVV0102_076872 + 0 NULL GK000011.2:9332872-9467060 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21471 AGTTCAGGACATGCTGAATTTGAGGCACTGTATGATCACTGCTGTTACTACCACAGAGTC Gene GeneID:614611|MOBKL1B:NM_001076338:60_cdna UTR3_Alt 2 NULL GeneID:614611 11 GENE MOBKL1B MGC142481 MOB1, Mps One Binder kinase activator-like 1B (yeast) EMBV3_33482 TCAACAACGTGGAGCTGAGAGCTGGACAGATTTTCACCATTCTAGTGACGGCCACAGCGT Gene GeneID:326577|SLC1A4:NM_001081577:20_cdna UTR3_Alt 2 NULL GeneID:326577 11 GENE SLC1A4 ASCT1 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 EMBV3_01740 GTGAGAAACCTTTTACTAGTAGCTCCAGTCTTCGACATCATCAGAGAGTTCACACTGGAG Gene GeneID:100140699|LOC100140699:XR_083962:266_cdna Constitutive 0 NULL GeneID:100140699 18 PSEUDO LOC100140699 NULL similar to zinc finger protein 256 EMBV3_42041 CGGGCCGGAAGGAGCCCCTCGTCGTAGCGGGAATGGGCTGTTTCTGGGGAGCTGAAAGGA Variant GeneID:281312|MSRA:NM_174114:15_cdna 201^269 2 EMBV3_06202 GeneID:281312 8 GENE MSRA NULL methionine sulfoxide reductase A EMBV3_24988 ACCAGGTGAAGGGCTGGGGAGTTATTAAGCTGTGCAGAGGCACCAAACGGTGCTACTTAA Gene GeneID:504596|BLVRA:NM_001097571:22_cdna Constitutive 0 NULL GeneID:504596 4 GENE BLVRA MGC155110 biliverdin reductase A EMBV3_01733 AAACAAGAACCCACAGAGGCCCCAGGCTGCTAAAATACATCCCAGAGGTCGACAATCCAG Gene BVT0102_145802 - 0 NULL GK000003.2:118158558-118182613 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174882 TCONS_00174881 1 XLOC_104717 NonCoding TCONS_00174881 XLOC_104717 NonCoding NonCoding - 3:118172723-118180129 - TSS129675 4994 2 TCONS_00174881_3 112 0.169203043652383 3 0.325995948683322 0.00374879286588688 0.00295779224906143 0.00289627239413277 0.00194052195877267 0.0016095969915894 0.000678308011590336 0.000827930076139464 0.000962296771688908 0.0013508343621959 0.000624506840395399 0.000242411091387549 0.000305980125836131 0.000133047534230785 0.00043705510327234 0.000910704671464893 0.00166064085194721 0.000618347750740762 0.00116059211241998 0.00166565526850861 0.00377499688482061 0.00133945170097782 0.000464555860256644 0.000574985699492692 0.00103897891862016 0.00475564143843406 0.00317709622512482 0.00203557336476464 0.000165408087993432 0.000101011276572601 0.00038283840826291 XR_234157.1 LOC101905228 PREDICTED: Bos taurus uncharacterized LOC101905228 (LOC101905228), 0.0 8754 100.00 0.971766119343212 0 noncoding 0 0 0 0 -0.0454932682904106 0.765699713874341 -0.0380853873139173 0.49092832017957 CCCCCGCTGCCTGGAGCTCCAACAGGAGCCCAACGAACCCAACGGCGCCCGGGGGTCTCGCGCGGTCGGTTAAGCGGCTCTGCGATCAGTAGAGGCCGGGCTGCAGTCCCTTACGCATCCTCGGGACCAGGAAAGGGAGCGATGAAGGCGCCGGCGCCCAGCCGCTCTGGCCTTCCGCCCGCGGCTCCAGCTCAGGGCCCCCGACCACTTCGGGCCACCTGGAGACCTGGCCGTCGGGAGTATTAAAAGCGCCCCGGCCTCTCGGGAAGTGCGACCAAAGCCGACAGCGACTGGTGTCGAGGAAGAAGGGGGTCGTTTCAGGCTGTGACATGGAAGCAGTTTTCTCGAGGAGGAAAGACGAGTTTTACAGACCGTTTGGTGACCGCGCCTCAGCTCTGCCCAGCGTTCACTCTACAATTGCAGTGAGCACCTGTTATGTGCAGCGATCACAGAGATGAGACCGACCAGAGCCTTACTGTCGAGGAACTGGACAAACAAGAACCCACAGAGGCCCCAGGCTGCTAAAATACATCCCAGAGGTCGACAATCCAGGAGGTGCTTAGCAAAGGACAAGCCAGAGACACGCGGAGCTCATCAGGCTCTGAGCGCCTGGCTTCCCAGGAAGGTGTCCAGGCTGCCACAGTCCCCCTGCCTAGAGGGCTTCGGGGGCACCGAGGACACGTGCCGATTGTACCAGGTGAGCCCTGGGGAGGCAGGAGGAGAGCCGCAGGAGGCACAGTGGTCCGCACCCCGTTTCTTCCCCGCTGCGCACAGACCGGCCTGCTGGTCCTGACTCGGATGGCTTCCCGGACCAGCTCCCTGGCAGTTGGAAGGCTGGGCAGACTCCCACGCGGTCCAGTCCCCACGCGCCCCCTGCCTTCCCTGGGCCCTAGAGCAGGGAGCTCACAGCGCAGAGGATGAGACGGCGGTCTGTTGTCCCAGCGCGTGGCAGGGCCACGCAGCTCTGTTATCTCAGTTTCTGAGGGTCGGGGATCCAGCCAAGACCGGCTGGGGCTTCTGCCTCGAGGTCTTGCGAGGCTGTACCCGGGTGTCGGCGGGGACTGTGGCCCGTGCACAGGCTCCACCTGGAGGGTCCAGGCTCACTCACGTTGGCGGGATTCGGCTCCTCACGAGCTACTAGGGGAACGTCATCCTTTTCTCCATGTTGCCGGAGGGCTCAATCCGTTGCCACGTGGGCCTTTCCAGAGCGCACCTCCCCGCGGGGACAGGCCCCCCGTGACCCCCGTCTGCAATGGCAGCTTGTCCCTTTGTGCTGTTAGATTCTGCTCACCCTGGGGGGCCTCGCAGGGTGCTCATTCAGTGGGGGCCCCTGGGGGCCAAACCCCCGCCCCACTCTGTGCTCTTCCTACCATCCCCCAGGCCTGGGTCTCCAGAGATGGTCATACTGTGTCCAGTGTGACAATTGTGTGTTTTTCTCTCGTTTTAGAAACTGTAGCCTGGGCTGTCGCACCCTGAGATAGATGTACCCAGAGAGTTGTAGGGTGCGCTGTGGACACTGTTCTGTCCATGCCGCCCCTGCGTCAGCCCTCCCCGGGCCTCTGCTTACTAGGTTTTCCCGCCTCCTCCGGGAGACAGAGCCGCTTTCCTTAAGCTCAGGAGCTGTTTGCATTTTTATCAGAGCAGGATCAGGCCCCCAGTCTCCGCGGAGTGGAGGAGCAACAGGGGAAATCCGAGAAGGAAGCATAGGGGCCCGCACAAGCCACACAGTCAAGGCTTGAACCACAGCTAAATCTCGGTGTTGGTGAGAGCCTGGGAAGAGCCTCCGCCAAGGCCTGGGCGCCCCGGGTGCCCCAGGAGGCCGAGCCAGAGGGGCTGGGTGAGGCAGGGCGGCCCCAGCCGCATGGTGTCCCGAAGCTGCATGGTGTCCCTGTCTGGTGTCCCCTGCCCAGGGCCCGCCAGGAGCTGGCACCTCATGCTGTTTTTCTGTTTGTGGGCTGTGTAAGTTAAAAAGGACTGGCTCTTTCTTTACCGGCAAACCTGCCAACCTTGACTGCCCTGGCTTGACAAGATGGAAGGAAAGGGGGAGGGAAGGCGGGAAGAAGGGCCCCAGGCCCCGCCCCTCGCCACCCCTCCCCTGGGCCAGCCCTGGGTCCTGCTTATCCTCCCGGGCTCCATCCAGCCCCTTGGCATTTGACCACTCCACTCTGGGGACACTGTGCCCCAGCACTGACCCCTGGAGACACTCGGGCAAGGGGAGCCAGGCTCAGTCCCGGACCGGAGCAGCCCTCAGGTGGGCCAGCACTGGGAGCAAAAAGGAGAGGACTCAGCCCCTTTTTCCTCGACACGTTATGGAAATTTGCAAGCACAAAGTGGAAGGGATTTTTCACTACACACCTGCACGCCCACTGCCGATGATCCCACTCACGTTTTACTAGACTGTTATATCTAGGCAACCATCTTTTAATTCATTTTATTTTTGATGCATTCAAAATCAATTTTAGCCTCAAATGTGCTTGCCCCTACATACTTAAGCATGTACATTAACTAGAGTTCATTAGTGATAGTCTTTTAATATAAAACAATGAAATGCCCGGCTTGTAAGTGAACATTCACTCTTTTGACAAGTGTATGCATTCTTGTAACTCAGACCCTTATCGAGATACTGAGTGTTCCCATTACCCCAGACTGGTTGACCCCCAGTCCACTCAGAGGCAACCACTCTGTGACCTCCTTGTGATACTGGCACAAAGGTACTAAGTGAAGTCGCTCAGCCCTGCTCGCCTCTTTGTGATCCCGTGGACTGTAGCCCACCAGTCTCCTCGTCCATGGAATTTTCCAGGCGAGAGTACTGGAGTGGGTTGCCATTTTCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACTCAGGTCTTCCCCATTGCACGCAGATGGTTTACCATCTGAGCTACCACAGATTTAATACTGGAGCCTAAAGCAAAAGGGAATTATTTTTAATGGCTAATATTTTTTTTCCCAGAACACCGAAGTAGTTAACAACCTGTTGAAAAATGAAAAGTAGATATATCAAAATAGTTTATTTATACAAAAACCAACCAATAATCTTGCTTTCCTGGTTTTAGTGGAAATGAACTCATCAATATTTCCGAAGTCTACTACTTACCTTGTTTTGAAAGGAGAGAATTGCCATGCTAATTTCTTTTGATGAAGTGATCTTAATTTTTCATTTACTGCAGCTTACTGAAGTGTCTTATAGGATGACATGGTGACTGGGAATGCTAACAACCTTCTCAAGGCCATGTTCAAATTGGAAAGTATTGCACTAAACAAATTTGTGAATCAGCCTTAGAAGATGCAAACACTATTTAATAACTGATGCTGCATGCTGCTTAAAACTATATCAGATGGATATATAGGATTTAGGATATTTGAGTCAAGTAAGTGACTGCTTTGTGTAAGAGTTATCCGTAGAAAACTTTTCTCCATTTAAAAATTCAAAATGTAAGACACTTTTTCATATAATCATTTACAATGTGAAAATTAAGGCATCTATAGTTTCTTTAATTTCTATTTGATATGCAGTTTTATAATAATTGACACTCATCTAGTGATTCATTTCCAATTTTTATACTTTAATTTTAAAATTCAAGTGCAGCATTGGTAAGATAGTGGTGAGCATAGCTGCCTTTCATAAAGTTCAAACAGTAGCCCATATCTTTTGCTAAGATTTCACATTAATCAAACATTGAAAGTTTCTGTTATTTCTAAGCAAAGGTAAAGGCCTTCTGCTAAGAGTACAACAATGTATAGTCTTTTTTTTTAATTGTATAAACATTAACTTTTACACTGGTTTATAATAACATCCTACACAGATTGTATAAAATAATGCATTTGTGCCAAGATGCTTTTGATGTATGCTTTTCATTTAATATATATTTCAGTATAAGTGCCTTTGTATATGAAATACCTTGTTTACATTTAATCTTGATCCTCACGGGATATCTGGATGTGTTTTTAATGTAGATTTTAGAACAGACATAAGAATATCCCATCTGTGCATCCATTTTTAAAACTTCACACACAAAATATATATGTATATTATATGTATCCATATACATATATATAAATGCTAAAAAATGGTTAACATTTGATTTCCCAGGGCAGCATTTATGCATATTTTTATGAGCTGAGGAAGCACAAATTTGGCATAATCATATTTGGGGGCAAAATGTCTTATAAACTCTTGTATAACAGGCTATATTTTCTCCATTAGACTATACCTGGCCACAGGCATTTTAAATTTTATTTCCAACCTCTAATTTCATAAGCTAGACTTAGAAAGTTTCATCTTTCATTTCAATGAAGTCAGTACAACTTACTTTATTGTTATGACATTGTTCTTCATGTGAGCAGATCTCGTGGTCAGACATGCTTGTTCACGATGGGCTACATCTTGTGTACAAGCAAAAAATAAAAAGTACTTGCTCCATTATTGACAGTATTTCAGAACTCATGTGATTTGCTTGTAACATGGTATACTTGTTTTGAATTTTATTAGACCAGGCACATGGATTTCCAACAATTTCCTGTGATTCTCTTAAGATTTAAATTGTTTTCTTCAAAGTGTAACATCTAAAACCACTCAATATATTGTGATTTTTGTTTCTTTGATTTTGTCATCTTCTGCAAAACATCATCTATTAAACTGTCAGTTTGAATATTTTTCAGAAACACTTCCCATTTTAGACAGCATCACAATGAGACATCAAATTTTCAAGGTCACAGCTTCTGTCTAAATTTTTCTAATATTTGAAACCTTTTTCATGGTTACAAAAATTTGATTCTGTTGTATTATTGTGGGGAAACATGCACAAAAAATAAAGACACTTGTGAATAAATGAACCAGTCACAGTGAATTTATTTGCCATTATAATAGTAAAAAAAAAATTTGGAAGAATCTTTGGCCATCATGTGAAATAGCTTCTTTAAAATAGCTTCTCTAAAATATACCCTTTTCCTTTGTTGGGTCGGTGTT TCONS_00174883 s 3' 5699 TCONS_00174883 s 3' 2485 EMBV3_28009 CTCTACCCTGAATTCTGTAGCAATCCCCGCGAGAGCTCTTGATTCTGTGAAGGTGACCAA Gene BVV0102_112196 + 0 NULL GK000014.2:23177074-23263814 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00055332 1 XLOC_033140 NonCoding TCONS_00055332 XLOC_033140 NonCoding NonCoding - 14:23188090-23190433 - TSS41009 2343 3 TCONS_00055332_1 82 0.133589415279556 1 0 0 0 3.9496405050008e-06 1.77211504227105e-05 0 0 0 0 6.73507880706686e-06 7.37553017576843e-05 2.83339195882803e-05 4.12050582184025e-05 9.85817684957409e-05 0.00023088349487299 0.000213586218000631 0.00112725737089171 7.08590756624573e-06 0.000160633295237368 0 0 0 0.00079495831407758 0.000422875777255474 0.000100172798872144 0 0 0 4.91942506062358e-05 6.00869549590397e-05 0.000408001909297952 XM_613406.7 ALG11 PREDICTED: Bos taurus ALG11, alpha-1,2-mannosyltransferase (ALG11), 7e-58 230 86.46 0.0815194195475886 0 noncoding 0 0 0 0 -0.128198302369442 0.432526586439417 -0.0182838480514355 0.751883132440717 CCAACTGCCCCGCCACCTGCGGCTGCGGATGCTGGGGCTGGTGACCTGGGAGTCCTCTGGTGACCTCGGAGACTCCGCCAGGCAGTCTGGGACGGTGCTGGCTGCCGTCCGGCTCGAGTGCCTCAAGGTGAGCCTGACCTTCTCCACTACAGCGAGTGGCCCTGCGCCCGCCTACCCGCCGAATCCTGAGTTAGCCTGGGCGAAAGAGCTCGACCTGTCGAGGTGGAGGGCAGCCGAGGGACCGCGACCTCGTTTGAGACCGGACCAGGGCTTGTGAGGGGACTGGGCGCCGGGAGGGCTGTCCCATGCCGGGTCCCACAGTGCGGGCGGCGCTCTCAGACCAGGAACGGGGAAGAAGGGAGCTAAGGGTGGGTCGGGTGGAAGAGGTCGAAAGCGCCGCACCCACCTCTTTCAGCTCTACCCTGAATTCTGTAGCAATCCCCGCGAGAGCTCTTGATTCTGTGAAGGTGACCAATAAAAGGCAATGGCATGAAGCCGCAACTTTTAAGTATTAAGTTGTGTTTGCGTAAAAATGGGTATTAACACCCTTTTCAACGGCTGCCAAGCCGAACACACGCTACTGGGAAGCAGTCTTCGAACCTTTACTTGTCATGTTGGGAACTGATAAGCACTAAACGGCTGGTTAGCGTTACGAATTTTCAATTTCCGTCTCACTGACCCGGTATCCGAAAGGTGGAGAAGGACCTACAGGGTACGACTTTATTTATTTTTTGTTTGTTTGTTTTAACACTCCTACAGATCCCACAGAAGCAAGTCATTTTACTTTTTTTTTTAAGTGGAGTCTTATTACACCACGCCAACGCTGTACAGCAGGGAACTGAAAACTAAGAGGCTAAATTGTTGTTATGCCTTGGGGGAAGGTGGAAAGACTGAAGAAAGGAGCTAATTCTATCAGGCACAACATAGTAATAGGCACAAAGAGAGTAAGCGGTAAGAAAGAATTCAGCCAGAAAATTGGTAAGCAAAGCACAGTCTTAGGCCTTTAAAGAATATATTGGTACTTGACCTTCCTCTTAGACATCAGTGACACTCATCATTCATTACAAATTAAATACACCTTAGTGTGTAAAAGCATGACTGGAATATGCCGGTGACAAATCTAGTGAATAAAATGTTTTAAATGTTTGTTGTCTGACTTCTTTCTTTGGGGTGGGAAGGAGAATAAAACTAATTCAGTCCTCATCTTCGCCTTTTCCAGAGTGTAAATAGTAGGAACTTATATGTCCAGTATTCTTTCCTAGTGATAAGTGAAAATGTATCAAGATTAGTTTTTTGACATATGCACATATCTAGAGAAAGACCCTGATCCTGGGAAAGATAGAGGGCAAGAGGAGAAGGGCATGACAGAGGATGAGATGGTTGGAGGGCATCACTGACTTGATGGACATGAGTTTGAGCAAACTCTGGTATATGGTGAAGGACAGGGAAGCCTGGCATGCTACAGTCCCTGGGGTCACAAAAAGTTGGACATGACTTAGAAACTGAACAATAACAGAGAAAACACTACTGCAGTTTCCTGATACTTCATGTGTCTATAATAAGTCTCAGCAAGTTATATTTCCCTTAAAGCCAAGGATATTGACAACCCTGTGCACTCTCCCTTCTTTAATAAATGAAAACAAGAACAAACAAAAAATCCAAGGACCAGCCCCCAAGTTACTGTATTAAATGGACAATGCTGAGACTTAATTTGAACTTTCTAAACCAATGCTCCTTTATGTTTTTAAATCTTTTTCTCTCCCTGCTGCCCTCTGTAGTGTCTCCCTCTTTGCTCTTAAATCTGTTATTTAGGCCTCTTCCAAATTCTTAAAAGTAATTATAATACAGATACAAATGGTAAAAACATGAGGTGCTGGAGGAGCAGAGAAGAAACTGAATCTTGTCCTCATTAACATTATTTCATTAATAAACATTTTAGGTCCTTCTGTAAATTTCCCATGCGGGCAAAAGATAGTGTTTCTTTTTAGGAATCCTTAAGAGGCTACTATTAAAACACCCTAAGTACTTCAGGTCAGTCCCGTTGTTAAAGCTTTTTTCCCCCACCAGGTCTCAACTTGAGTGTCACCTTCTCAGGAGTCCTTCCCTGACATGCCCAGAGTTCACCTAGATCCTTCTGTTGGGTTGGCCAAATGTTCATTCAGGTTTTTCCATGACATCTTACAGAAAAACCCAAACAAACTTTTTGGCCAACCCAGTACCTTTTAGTATCTGTCTGACCTGCCAAAATGGAAATCCTTCTCTAATAAAGCTATTTGCCCAGTGCCTGCTGGACACTCACATTTGTTAACAGCACCCAAAACGTTTTTCAGTTTATTGCTCAGC TCONS_00052961 . 5' 91 TCONS_00052961 . 5' 91 EMBV3_36654 GAAGCCCAGGCATGTGAATTGGGACCACCACAGGATTTTTTCCATGGCAGGTTAGATCTC Gene BVT0102_110496 + 0 NULL GK000001.2:73776575-73792743 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001215 TCONS_00001214 TCONS_00001216 TCONS_00001217 1 XLOC_000278 Coding TCONS_00001215 XLOC_000278 Coding Coding LOC100848949 1:73784830-73790785 j TSS599 5820 1 TCONS_00001215_9 617 0.0403780068728522 2 0.0228417870339268 0.00169191401881632 0.00258578109878321 0.0029568013677384 0.00225951442303662 0.00169179129496276 0.000262319255529707 0.000634566076487202 4.46999607032133e-05 0.00141108917726838 0.000286876771841404 0.000227307062673548 4.75786191255124e-06 4.79012744578427e-05 0.000340515743325569 0.00071963066330468 2.52930972501839e-08 0 0 0.00111427934237991 0.000633750632589505 0.000147619468376518 4.06263814753924e-13 7.59801369606679e-13 0 0.00110974187199122 0.000981425260185025 0.00153324335588143 7.11647554231642e-05 6.43212126257239e-09 1.03926726021113e-08 XM_003581716.2 LRRC15 PREDICTED: Bos taurus leucine rich repeat containing 15 (LRRC15), 0.0 4076 100.00 0.388144329896907 NM_001135057.2 LRRC15 Homo sapiens leucine rich repeat containing 15 (LRRC15), transcript 0.0 3085 78.73 0.631099656357388 TCONS_00001215_9 sp|Q8TF66|LRC15_HUMAN LRC15_HUMAN Leucine-rich repeat-containing protein 15; 0.0 995 86.40 0.940032414910859 7 coding 0 0 1 0 -0.0329597612801352 0.753343636758731 0.0513760574983994 0.291055318260739 TCCACCAGATCACTGCATGGTCCCACTCTGTTGGCTGCCGCAGCTCCTCCCAGCAGCCTCCGTGTTCATGGCCTCAGCATCTTCCTCCTGGTTCAGGCCTGGTTTATTTGTTCTCATTTCCTATTGGTTTCTCCTGAGGAAGCCATGTTCAGCCAGCAAGTCCAGGAACTGAGAGGGACACAGAGATGGATAAGATACTGTTCCTGACTTAAGGAACTCGTTGGGATGGGGCACCAGCAGCCCTGCCCTTGTGAAGCCTACTGAGTAGTGAGGAAGCAGACGGGGTCACAGGGGATGCCATATGCGCCTCTGTGGCTGGGCTGGGGAGGAGGCTGGGGAAACCACCGGCATTGGAGGGCGACTAAAGCCGACTCACGGAATCCTAAGGTGGAGGCATGTGAAGTGCGGGAAAGATTTGGATGAGGATGAAGAGCCCTCTAGGTTGCTTGGGCAGCAGCCTGGAAGTAGGAAGGCCAGCGGGGAAGATGAAGAGGCTTGCAGATCAACCTATAGAGGCCATGCTACCGAAGCATTACCTCCTTCTGCTGGTGGGCTGCCAGGCCTGGGCTGCGGGTTTGGCCTTCTATGGCTGCCCGAGCGAGTGCACCTGCTCCAGGGCCTCCCAGGTGGAGTGCACAGGGGCACGCATCGCGGTGGTGCCCACCCCGCTGCCCTGGAACGCCATGAGCCTGCAGATCCTCAACACACACATCACCGAACTCAATGAGTCCCCCTTCCTTAACATCTCGGCCCTGATTGCGCTGCGGATAGAGAAGAACGAGCTGGCCCACATTGCTCCCGGTGCCTTCCGCAGCCTCGGCTCGCTGCGCTACCTCAGCCTTGCCAACAACAAGCTCCAGATCCTGCCTGTTGGCCTCTTCCAGGGCCTGGACAACCTCGAGTCGCTCCTGCTGTCCAGCAACCAATTGGTGCAGATCCAGCCGGCCCACTTTACCCACTTCAGCAACCTCAAGGAGCTGCAGCTGCATGGCAACCACTTGGAGTACATCCCTGATGGGGTCTTTGACCACCTGGTGGGCCTCACCAAGCTCAATCTGGGCAAGAACAGCCTCACCCACCTCTCACCCCGGGTCTTCCAGCGCCTGAGCAACCTTCAGGTCCTCCGGCTGTATGAGAACAGACTCTCAGACATCCCCATGGGCTGTTTTGATGGGCTCAGCAACCTCCAAGAGCTGGCCCTGCAGCAGAACCAGATTGGAATGCTGTCCCCTGGCCTCTTCCACAACAACCGTAACCTCCAGAAGCTCTACTTGTCCAACAACCACATCTCCCAGCTGCCCCCCGGCATCTTCCTGCACCTGCCCCAGCTCAACCGGCTCACGCTCTTTGGGAACTCCCTGAAAGAGCTCTCTCCTGGCATCTTTGGACCCATGCACAACCTGCGGGAGCTGTGGCTCTACGACAACCACATCACCTCCCTCCCGGATAACGTCTTCAGCAGCCTCAGCCAGCTTCAGGTCCTGATCCTCAGCCGCAACCAGATCAGCTACATCTCCCCGGATGCCTTCAACGGGCTGGTGGAGCTGCGGGAGCTGTCCCTCCACACCAATGCACTGCAGGAGCTGGATGGAAGCATCTTCCGCATGTTGGTCAACCTGCAGAACATCTCCCTGCAGAACAACCGCCTTCGGCAGCTCCCCGGAAACCTCTTCGCCAACGTCAATAACCTGTTGACCATCCAGCTGCAGAACAACCAGCTGGAGAACCTGCCCTTGGGCATCTTCGATCACCTGGGGAAGCTGTGTGAGCTGCGGCTCTATGACAACCCCTGGAGGTGTGACTCAGACATCCTTCCGCTCCACAATTGGCTCCTGCTCAACAAGGCCAGGCTGGGGACAGACAGCGTCCCTGTGTGCTTCAGCCCAGCCAGTGTCCGTGGCCAGTCCCTCATCATCATCAATATCAATGTTGTTGTCCCCAGTGTGCAGGGCTCAGTGGTCCCCGAGGTGCCCAGCTACCCAGGGACGCCGACATACCCGGACACGTCCAGCTACCCCGACACCACCTCCATCTCCTCCACCACTGACTTCACCAGCCCCTCACAGGACTACACCGATCTGACCACCATTGAGACCCCCATTAGTCGTGGCCCGGGGGACATGCCCCAGGCCCAGAGAGGGCTGGCCATTGCCGCCATTGTCATCGGCATCATTGCACTGGCCTGCTCCCTGGCTGCCTGCATCTGCTGTTGCTGCTGCAAGAAGAGGAGCCACGCGGTCCTGATGCAGATGAAGGCACCCAATGAGTGTTAGAGAGGAGGGCTGGAGGAAGGGCTAGGGGACGGTGGGACCCCAGAGGACCTGGGATTTCACCGTGCTGCCTTCACCTCTGGGTCCACAGACCATCCCCTGTCCCTCTCTCTCGGGTTCCCTAGAGAAAGGCATCCCTACCTTTTCCTGACCTGCCTGGTTCTCCTGTAGATGAGGTTCTGGCAGAACCTTCTTACTACCAGGGAGATCTAACCTGCCATGGAAAAAATCCTGTGGTGGTCCCAATTCACATGCCTGGGCTTCTTTCCAGAAAGCCCCTCCTCTAAAGCTCACCAGCTCTCCTCCAAAACGTGCCTTCCCTGTGTCTGTGCCCCCACTGGCCTCCATAGACACAGTTATCACACACCTGCCACTTTGTGGAAATAGTTCTCCACCGGGACAGCCCCTCTCCCAAGTATTATGTAAGTTGATTCCCCTTCTTTGCTCGTCTTGTTTGTGGCATGGCTCCACCCTGTCCCCTCAAATGAAAAGTCTCTCTTCATTTCCTGCCCCTGAAGACAAGGTGACTTTTCTCCTCAAAGGAGGCTTCAAACCTTTTAGCTGCTTTTCCAAGAACTGCCAAATGCCCTGGCTTTCAGGATGCTATGATAGAAAGAAAGGGAAAACTGAGGCTGCTCAGTTTCTGAAGACAGAGCCATCATCAGTATCTGTCTTGTGATTTTTATCTGGAAAAAGAAGAAAGGCACCGGTGAAACAAGTTTTGCCTCTTTAGAGAATATTTCTGAACTGCAAACTTTGCTTTGAAAATTTTAGTCCTTTAAGGAATAAAATCATGTAGAAGTTCTGACCTCCCCAAAACATGAAAGTCAGCTTATTGGTATTGGATGGAGAAAGCAGTCTGGTACCTGGGGATCCTTGTGTTCACCTGCAAGGTTTTTCTCTTCTAACTGTTTCTGGAAATGTAACCTACATACAGAAAAGTGGGCGCATGCTAGTGTAAGGTTTGATGGATTTTCACAAACTGTACACACCTGTGTGATTAGTACCCAGTTCAAGAAACGAGACATCACCAGGATCCTCCATCTGGGGCTTTTACTGGAGAAGACTGGGGCTTGTGGAGATGGTATGGACTTACCTGGAAACTGGCTCCCCACAGACCAGGATAGGCCCCTGCCTGCCCTCCCCCTGCAGCCAGTCCTTGCAAAGGCCCAGCTACCAGCAGTGGAGGAGAAGATGTAGGTATACTCTGGCCTGAACAGGAAATTGTATTCAATGCCAGACCTTCAGGCACCCAGACTGGGCAGGTCAGAAGCATCTCAACTAGATAGGCCCATGCAACCACACACCCTACCCTGCCAACAAGCTGTCTGTTGCTCACTGGAGGTTCCTCTGCTTGGGCCTTTTATGGGCATGAGATGCCCTATATCTGTTTTTAATTTTCACTCTGCATCTGGGGAAGTGAAATAGCTTAGGGATGAGATCCTTTAATTGGACAGCCAAGTATAATAGAACCCAGCAATCCTTCTGGTCATGGTAAAATTCTTCATAGACATTACAGTCAGCTAGAAACTGAACTTCAGCATTCTCACACACAGCAGGCAACACGGATACACAGACAGGTCAGACTGGGTCAGGGACCACTCTGGAGCTTCCCCCTGCCTGTAGTCTGGTTACAACAGTTGAGTGCTTTGGTTCAGTGTTGCAGTCACATGAATACCTGCCCTGGCCACCATTCCTGCTGCACACATATTCACAGTGGTAAAGAAAGGACACTCATGACGATGCATGTCTTTCTCTGGACAACTGGTATACCACTTTAGAACTAGAAACAGTGAAATGGAGACTTTCAGGTGTCTGTGTCTTCCCATAAAAGAGCTGAAGCCAATACTGTACAGATTTGGAAATCTGCCATCAATCCTGACTGGCCTTTACTAGTTCCCTCTGCTGCACGAGACAAATAAGAAATCCACTTTGGCCTTAACAGCATTGTGCTGACGGGCCCTGACGAAGAGTCCAGGAGCAGATGTGTGTTAAGAGCTAGTGCATTTTGTAGCTTTTCACTCTGTCACAGGAAATCTGGGAGAGATGTTGTTAGAGGCAAAAGACATTATCTCACCAAGGTAAATCCGGGTCTCCAAAATGTTTGCAAAATATGTATAGTACTTGGCAGACATGTACCAGGGTTTGCCAGGGTCCAAAAAGAAATGAGCCTAGAGCTTGGGGCTTGAGCATCATTCCCAATGGTGACCTGCCTTGTTGATCCTGGGCCCCAAAGGGGAAGCGTGGCCTACTCTCCTCCAGACAGGAAGCATGGTTTGGCACTGCATTCTTCAAAGGACTCCGTGTAAGGCGGGTCATTGTGCAAGGGTACAAGTGGGCCAGAGATATCAGAAAGGTAAGGAAGGAGTCTTCGTCATCCAGTGTGACCTGTCAAGCTGAGCCCAGACCCCTGGGTATTAACAGCATTGGCCACGACCTTGGAATATCTTCCTCTCTGGCCCAAGATACCTCATATGTCTCCAGATCAAAGGCTGGCCTGAGGGCAGCTGTCCTCAGATGACTCCCCAGGGAAGCACCCTAGGTGGGGCTGGTGGACCCTTTTCCTGACCTTCTGAGTGCCCCTGGTCTTTTCTCCATCAGAGACGGGAGGGAACCATTGAGCCTTCTCTTCCTTGGCAGGCCATGTGGTCTCTCTAAACCATGTTGTCTGGTCAGGAAGCTGCCGGAAAAGGTGGGTGGAGTTTCCTTTCCAACAGGCTCTTGGCTCTTGGCATTTGCTCACTTCTTGGGGCTGAAGTGAGCTGCTTGGTTCCCCAGAGTTGAGTTCACTTTTCTCCGTAGCTCTTTGGCTTCTAGTCCTCCTTGTCAGTTCTCCATTTGGAGTGGAGGGTAAATATTGGAGGAAAGATAATAAAAACTGGTTAGAACCACTGTTTTTCAAAAATGTTTACTCTGCATAGATACCCTTCAAAGCACTTAGCAGGCATTTTCTTTTTAACCCTCACAACAGCCCTGTGCAGGAGTGGTACACGTGTGAGGATCTAAAACCTCTTGCTTCTGCAACATTATTTAACAGGCTGTGAGTGTTCCTTCTCTCTTTAAGCTCATACAAGAATTCATGGCCTGTCCTAGGCTTTCATTGCTAAACCAAGGAAAATGGGAGTCACTGTCTTGTTGCTCCCCGTCATCTTAGCTATTCGACCCCACCTGGTACTGTGTGGATCCAAAGCTTTGTAAATACAGGAAAAGTTAAACTCATCCATCCATTAAAGAAAAACTGGCTTTCCTCAAGGGACTGTTGGGCTGAGTGTATATTTTTCCTCCTCGCCAGGATTTAAAGGCACAACGCCGTTCTCAGAACTCTTCATGGGCGGCAACAGCATTGTCACAGATGTCTGTGTAGTGAAGTGTTAGGAATCATTTCCAGACTCAGGAAGTTTATGAAGAGGAGGCAACTACAGATAACAAGATAACTGGAGTTGCTAGAAAGACATGGGCGGTAGCCTGCCTTTAGCTACGAATCACTCAAAGAAATCAACCCACAGATCCCACAGTTGGAATTGAACTGGAGTTGCTGGGGAGGCAGTGG EMBV3_25330 TTCATCATAGCATAGTTAACCCCAGTGACTGCGACATGAGAAGTCGAAAACGTCGTGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00148 GTTGAGATCCAACTGCCTGGGTCAGGACCCCATCTCTGCCTTTGACCACATGTGACCTTG Gene BVT0102_409268 + 0 NULL GK000004.2:103246669-103271363 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17661 CTTCACACATTTCCAGGCATGGTTTGAGTCTGCGGAGATGCCCCAGGCCAGTGTCTGGTT Gene GeneID:100337430|LOC100337430:XM_002693560:225_cdna Constitutive 0 NULL GeneID:100337430 15 GENE LOC100337430 NULL aristaless-like homeobox 4-like EMBV3_30331 CTCTACAAGCCTAGGTCCTGAGCTGGGGAGAAAGTGGGTAAGATTTGGGCATGCACATGC Gene GeneID:517788|UBAP1:NM_001100376:31_cdna Constitutive 2 NULL GeneID:517788 8 GENE UBAP1 NULL ubiquitin associated protein 1 EMBV3_01440 TGAATGGGCGGGCCGGTCCCTGCATCTGAGGCTGTGCATCTCTGGCTCTCAGATAGTCCC Variant GeneID:512887|LOC512887:NM_001101965:43_cdna 103^228 1 EMBV3_22653 GeneID:512887 27 GENE LOC512887 MGC151606 hypothetical protein LOC512887 EMBV3_23796 AAGTCCCACTTCTGCTAAGGGGCTTTATGACCCCATGTGGACTTGTGGCTACCAACTATG Gene GeneID:281053|CD3D:NM_001034033:2_cdna Constitutive 1 NULL GeneID:281053 15 GENE CD3D MGC127796 CD3d molecule, delta (CD3-TCR complex) EMBV3_23780 GAGAAACTTGGCATCAAGTGTGAAAGCAGGGGGAAGAGCATGTTTGCAGCCGGGGGAGTA Gene GeneID:520584|PRDM7:XM_002699750:3_cdna Constitutive 0 NULL GeneID:520584 X GENE PRDM7 NULL PR domain containing 7 EMBV3_18115 GGGCACCCAAGCCAGAAGAGAATCCAAGCCTCAACATACAGTTCAAGATCCAACAGCTTG Gene GeneID:514761|AP3M1:NM_001075680:311_cdna UTR3_Alt 2 NULL GeneID:514761 28 GENE AP3M1 MGC137644 adaptor-related protein complex 3, mu 1 subunit EMBV3_14365 CAGTGCAAGCAGACGTTGGACTACTTACGCTACGAAGACACGCTTCTCCTGGACGACCAA Gene BVV0102_092972 + 1 EMBV3_12076 GK000003.2:21475083-21490542 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169058 TCONS_00169057 1 XLOC_103266 Coding TCONS_00169058 XLOC_103266 Coding Coding TXNIP 3:21489096-21493258 = TSS126668 2864 1 TCONS_00169058_2 391 8 0.313626532083634 0.00178297651896397 0.00180373664020692 0.00301019164178103 0.00162749384639571 0.00208656643056725 0.000422620107120204 0.00196072692994785 0.00631382953596929 0.00184506743350358 0.000199762243550436 0.000312643737023662 9.13518880375219e-05 0.000318990139533047 0.000479568427092311 4.44580825392535e-05 0.00442652259885921 0.00255107488447588 0.00162748146674778 0.00305825420801557 0.00214841813429468 0.000929627450690389 0.00164128805233951 0.00070686273565946 0.00253604294669232 0.00460332356799991 0.00353505526508474 0.00433317544417426 0.00037897533258409 0.000527346948586268 0.000555301968772514 NM_001101875.2 TXNIP Bos taurus thioredoxin interacting protein (TXNIP), mRNA. 0.0 5166 100.00 0.999650837988827 NM_006472.4 TXNIP Homo sapiens thioredoxin interacting protein (TXNIP), mRNA. 0.0 2677 82.70 0.924930167597765 TCONS_00169058_2 sp|Q9H3M7|TXNIP_HUMAN TXNIP_HUMAN Thioredoxin-interacting protein; 0.0 775 94.88 0.997442455242967 2 coding 0 0 1 1 -0.0158538094717615 0.914201956578972 -0.0123284816008295 0.808655704997024 CTTCTGAGGTGGAACGCTTTAAGCCTGCCCGCCGAGAGCCGGAGCTTTCCTCCAGCTGTTAGAAAGAAAGAGCTTATTTTTCTCTTGCAATCTTTTGATATAACTCGCGACTTACATTTTTGGGTGGACGTGTTTTCGAAAATTTAGTAGAGAATTGAGAAGTGAAAAAGTTTTAACTTACAGCAAAGGGTCCTTTGAGAGTTTTGTTTTGTCCTCATTTTTAACTGTTAAGCAAATCCAGCCCAACATGGTGATGTTCAAGAAGATTAAGTCTTTCGAGGTAGTCTTTAACGACCCCGAAAAGGTGTACGGCAGTGGGGAGAAGGTGGCTGGCCGGGTGATAGTGGAAGTGTGTGAAGTCACTCGAGTCAAAGCTGTCAGGATCCTGGCTTGCGGAGTGGCCAAAGTCCTGTGGATGCAGGGATCCCAGCAGTGCAAGCAGACGTTGGACTACTTACGCTACGAAGACACGCTTCTCCTGGACGACCAACCAGCTGGTGAGAATGAGATGGTGATCTTGAGACCTGGAAACAAATATGAATACAAGTTCGGCTTTGAGCTTCCTCAGGGGCCTCTGGGAACATCTTTCAAAGGAAAATATGGGTGTGTGGACTACTGGGTGAAGGCTTTTCTTGATCGTCCCAGCCAGCCAACTCAAGAGACAAAGAAAAACTTTGAAGTGATGGATCTAGTGGATGTCAATACTCCTGATTTACTGGAACCTGTGTCAGCTAAAAAGGAGAAGAAAGTTTCCTGCATGTTCATACCTGATGGGCGGGTGTCTGTCTCTGCACGAATTGACAGAAAAGGATTCTGTGAAGGTGATGAGATTAACATCCATGCTGATTTTGAAAATACGTGTTCCCGCATCGTGATCCCCAAAGCTGCCATTGTAGCCCGCCACACTTATCTTGCCAATGGCCAAACCAAGGTGCTGACGCAGAAGTTGTCATCAGTCAGAGGCAATCATATTATCTCCGGAACCTGTGCATCATGGCGTGGCAAGAGCCTTCGGGTGCAGAAAATCAGGCCTTCTATCTTGGGCTGCAATATCCTGCGAGTTGAATACTCCTTACTGATCTACGTTAGCGTCCCTGGCTCCAAGAAAGTCATTCTCGACCTGCCCCTGGTTATTGGCAGCAGGTCAGGCCTCAGCAGCCGGACGTCCAGCATGGCCAGCCAAACCAGCTCTGAGATGAGCTGGGTAGACCTTAACATCCCAGATACCCTAGAAGCTCCTCCTTGCTATATGGATAGCATTGCTGAAGATCACCGGTTGGAGAGCCCCACTACTCCTCTGCTAGAGGACACAGATGGTTCTCAAGACAGCCCTATTTTTATGTATGCTCCTGAGTTCAGGTTCATGCCACCACCTACTTATTCTGAGGTTGATCCCTCCGTCCTGAACAACAATGTGCAGTGAGCATGTGGAAGAAAAGAAGCAGTTGTACCTACCTGTTTCTCTTCATCTCTCTTCCTGGACTCTTTAATTTTTTAGAGACTCAACAGTCTCCACAGTGGGGTACAGGTCCACCCCAGCCTCTTGACTCTCCAGTGTGGGAGGTGATCAGCAGGCAATCTCCTGGGCCTTAAAGGGTGCGCACTCGTCCTCAGCCAGCGAGATGATGTGATACAGAGTTTTTTGCTAGATGGGTTTAAAAACACGTTAGAAAAAAAACTAAGGCCCATCCCATTTTCTTGAATCTCTTTGAAAATTGAGGCATTTTCAGTAGTTTTGAGTAAGGGGTAGAAATGGCATCCTGGAATGGTGTTCCCACGGTTGAATGGAGGGGATTATATAATAGAGATATTGTTATAACAATAGATCTTGAACCTCTGCCATGTGGAGGAGAGCCAATTTAGCAAACTAAGAAAGTGAAAAGAAAAAATGGTCATGGCCAAAACTTTGGGAAAAGGATGTTCTTAAAATCATTGTTCCCCATTGTTTGTACACTTACAGAAAAAGAAAAGCCCTCCAGAATTGATTGGGTTTGGACTTTTGAGCAAGCTTCCCATTCGAATTAAAGGGGAGGAGCTCTTAAGTTTCATTGTTCAGAAAGTAGTTTTAATCAGTCATAAGGCAGTAGTAACTGGGCCCCACCAGAGGTCTTAAAAGCCATTTTTAGAGCTTGTTGCACTGTGTTCTCCTGTTGGCAAACATTTTTATGTGGGAGAATTTTTTTTTTTCATGTGACTCCTTGGAATTGATTCTGAGGCGATGTCCTTAGCACTTTAGTTTGTGTCAAATTTGGGTTTTCCTTTCTCAGATGTAAGCTAAAACTGGTCTACTATGTCTCTAGGGGTAAGCACAATGACAGGGAAAAAAAAGTGTTACTGCTTTTGAGACTTTGTCGCAGTGTACGGAATTCTGCAGTTCTGACACTGATTACGTAAGGGTTGCTGCTATCAGCCTTGCCCACTGTGACTTCTCCAAACCCAAGGAGGAACCCTAGATAAAATGCCCCAACACTGTGATGAGAGCATCCAGATGTTGCCATGAGAAACCGGAAGGCAGATCTTCACAGAAGCCCCAAGGGCTCACTCCTGCCCAGTGTTAGGAGACAGGGTTGTTGACAGCTCCTGTCTCACTGCAGCCTCTAGCACTTGGTCAGTCACTCTCCGCCTTAGCACTTTGTTCACTGTCCTGTGTCAGAGCTCTGAGCTCGCTCTACCCTTTTCTGAAAAAGTATGTGGGCTGAAGGTGGTTTCATTTTTTGTTTTTTAATTGTATATCTTTTTGTATGAGAAAAACTATATTTTGTACTTAACCAGATATATTTTTCACCCCAGCTGGGGTTATTCTTTGTAAAAAAAAAAAAAAAAAGAAATAAAATAAAAATAAAGTTTTTTTAATGGCAAAAAAA EMBV3_20194 GTCAGAGGAGACGGTTTAAAATAACTTTTCCCCTCTAGACCTAAAAGTTGTAATCAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09128 TGACCACAGGCTCTTGCTAAGGTTGCCCAGGTGTCCTAGTCCTGACTTCACCTCTGATTT Gene GeneID:540520|PGAP2:NM_001099111:22_cdna Constitutive 1 NULL GeneID:540520 15 GENE PGAP2 FRAG1 MGC166328 post-GPI attachment to proteins 2 EMBV3_30144 CGAGGACTCCAGCGGCAGCACAGGTGGCAGGCGCAATCCCGGGGAGGCCGGTGTGTGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00448 GACCAATTAATGTCACTCTAGTGCTTAGGCTGCGATCTTATGGTAGCAATTCTGTGCTGG Gene GeneID:615880|SLITRK1:XM_002691909:30_cdna UTR3_Alt 1 NULL GeneID:615880 12 GENE SLITRK1 NULL SLIT and NTRK-like family, member 1 EMBV3_38240 AGGAGGGTCCTCCCCCAAAACACACCTAGGTGAGGCATTGGCACCCTTGTCCAAGGCGTA Gene GeneID:618042|VGF:XM_002698127:439_cdna Constitutive 0 NULL GeneID:618042 25 GENE VGF NULL VGF nerve growth factor inducible EMBV3_30658 GTTGTGTCTGCTTAGTTGTAAGCCAGCAATCTTCTCTGACTGCAGCATTTCTCTAATTGT Gene GeneID:514003|CDC40:NM_001075643:26_cdna Constitutive 2 NULL GeneID:514003 9 GENE CDC40 MGC140426 cell division cycle 40 homolog (S. cerevisiae) EMBV3_22382 CGATACACGGGGAGGAAAAGCATAGTGAACACTAACTGCCCCATCAGTTGCGTGAATCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03711 TACATATTTCCCGCGATAAGATCACCAGACCCGGAGCCAAGCTATGGAAGAAAGGGGAAG Gene GeneID:506316|DNAJB11:NM_001034268:66_cdna Constitutive 0 NULL GeneID:506316 1 GENE DNAJB11 MGC128872 DnaJ (Hsp40) homolog, subfamily B, member 11 EMBV3_01972 CTGCTACTTCCCACATCTCCAGTGGTCCCTCAGCATGCAGGCATATCGGCTTTCAAATGT Gene GeneID:510355|PLSCR3:NM_001046053:69_cdna Constitutive 0 NULL GeneID:510355 19 GENE PLSCR3 MGC138060 phospholipid scramblase 3 EMBV3_02892 GAGGAAGTAGATACTCCACACAGGAAAAGGACATGCCTAATACCAGCTGTTTCACGGAAA Gene GeneID:100335357|LOC100335357:XM_002691810:464_cdna Constitutive 0 NULL GeneID:100335357 12 GENE LOC100335357 NULL hypothetical protein LOC100335357 EMBV3_04601 AGAAATCACGCCAGAAAGGCTAGAGTGCTAGGTGAGTCCATCTTTTGGATCCGGGCACTG Gene BVT0102_113615 - 1 EMBV3_26148 GK000021.2:32113037-32117943 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43561 GGTGTTTGCAGAAAGACACTAAAGCTGAAGTGAATAGAATTGGCCTGCATACAGAAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04654 CTGAAGGAGATGACAAAACGGCCTTTCCCAGAGAACTGTAAGATGATGGAGACGTCGACC Gene GeneID:514673|GDPD2:XM_002700027:116_cdna Constitutive 0 NULL GeneID:514673 X GENE GDPD2 MGC127567 glycerophosphodiester phosphodiesterase domain containing 2 EMBV3_38091 AGGAGTTTGGTATCTCCCCAAAATGTTCCCTGTTGCATACCAGTGTCTGCCTGTGTCAGG Gene GeneID:511135|ACLY:NM_001037457:115_cdna Constitutive 0 NULL GeneID:511135 19 GENE ACLY MGC128987 ATP citrate lyase EMBV3_22523 CTGGCACGAGCAGTCAATTGCCCAATCTGCATTCCTGTCCTTTAGGCCAGTGTTTTCCTT Gene BVT0102_403877 - 1 EMBV3_19022 GK000022.2:32286399-32471629 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16870 CCTGCCAAGTGACACAGAAAGCGAAGGAGTAGAGACAGAACAAGAGAAACGTTCTGCCGA Gene GeneID:615152|LOC615152:XM_002692696:82_cdna UTR3_Alt 2 NULL GeneID:615152 14 GENE LOC615152 NULL similar to chromosome 8 open reading frame 34 EMBV3_25283 ACACAGAAGAACTATACAGGAAAGGTCTTAATGACACAGATGCCACAATGGTGTAATCAC Gene BVT0102_012180 - 0 NULL GK000005.2:54239669-54857742 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18996 AGGCTCTGCGTCAGGGCTGGAGACTTTGGAGAAACTGGAACTGTCCTGCCTTTGAAGACT Gene BVT0102_023768 + 0 NULL GK000013.2:73773898-73833118 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046211 TCONS_00046214 TCONS_00046209 TCONS_00046210 TCONS_00046212 TCONS_00046215 TCONS_00046213 1 XLOC_026642 Coding TCONS_00046211 XLOC_026642 NonCoding Coding - 13:73779114-73783039 - TSS33555 666 1 TCONS_00046211_2 66 0.548048048048048 2 0.830784913353721 1.55806505580318e-36 0 4.08981496980935e-21 0 0 0 0 0 1.9706893411721e-27 0 1.35888925929351e-05 0 2.97455682740138e-20 0 0 0.00667992051741237 0.0075764385248691 0.00363407617323527 4.38240928229515e-16 4.93486863728095e-11 1.29230887192347e-179 0.000339115021730671 0.00141041802665631 0.00158457620134704 0 2.74781385138808e-13 0.000879105802475772 0.00103839763957804 0.000430030258807717 0.000785012054112923 XR_226041.1 LOC101902669 PREDICTED: Bos taurus uncharacterized LOC101902669 (LOC101902669), 0.0 740 100.00 0.614114114114114 0 noncoding 0 0 0 0 0.152096210775416 0.426549867200805 -0.0594761559126809 0.236599316173056 GAACCAGGCTCAGCGGGAGAAAGACAGCCCCATGTGCTGCAGGTCCAACAGGCTCCTGGAACTGCAGGCTCTGCGTCAGGGCTGGAGACTTTGGAGAAACTGGAACTGTCCTGCCTTTGAAGACTGTCCAGCTGGCTGGTGAGGTTAGACAAGGTCACGTGACTCTTCGATATGTGGAAGATGATGACAAGTCTTACGGGAAGGGGAGCAAAGGTGCTCCCTCCAGGAAGATGCGTTCCCAACCCAGCAGAGACGGCTAGAGGCTCACCCACATCCTGGCTCTCCGTTCCTTCCCAAACTGGACTACGTTTCCCTACGTCTCCCCTGCAATTCAGTGTGACCACAGGACCCAGTCGCAGGGGTGGGGACTGAGCGTGGACTGAAGCATTGTGTGCCGCTTCTGAGCCTGGCCCCTCAAAATTCCCAGGACTCCTTAATAAAGATGACCCCCAGGGTGACTTTGAGACCCACATGTTGTAGATTCAGCCTGAGTTCCAGAAGGACTGAATGGAGAGTTTCTGCCCACCCAGAACTGTTACATGAGAAAGAACTCTTCTAGTCTATTTACCAGGTATTTGTAACAGTCTGTGTGTTACAGTAGCTACCTTAACTCTAAGACACTGGCCTTGAACATCAGATTTTTTTTCATTATGTTACTTTTCCTCT TCONS_00046206 s 5' 5172 TCONS_00046206 s 5' 5773 EMBV3_19826 TGGTCCAACGGAAAGCTGGTGCCAAGGGTTCTTCTCTCAAAATTGACATCATCCAAGGTG Gene BVT0102_027065 + 0 NULL GK000004.2:67105086-67519208 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00787 GGGTGGTATCCAGGGAAACATGATGGAGTCTTGAGGGAAGGAGAAGTCACACCCTCGTAA Gene BVV0102_100853 + 0 NULL GK000025.2:36914359-36924063 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147139 1 XLOC_089307 Coding TCONS_00147139 XLOC_089307 NonCoding Coding - 25:36918725-36919697 - TSS109863 972 2 TCONS_00147139_1 63 0.0751028806584362 1 0 0 0 0 0 0 0 1.33028450204567e-86 0 0 0 2.35512761712313e-06 0 0 0 0 0 0 0 0 7.75461780373616e-05 0 0 0.000273711107380104 4.47423086898049e-08 0 0 0 0 0 0.000215286688057931 0 noncoding 0 0 0 0 0.0296435708462097 0.778859066008103 0.0371643813628642 0.456517862237347 CAGAACTTCTATGTTTAATTCAGGACACAAGACAGGTGACATAAGTAGCTTTATGAGCAAATTTTTTTGGTCACTTGCTACTCCATGAGTCTGATGATGCATCAGCCTCTTCCTGCAAAAGAGACCATCTGAACTTCCTTTTCATTGGAACTTTTCGTCTGGAGTCCACACTGTGGTAAGGCAGACTGGGAGGGAAGAGGGTTGCAGTGGTATTTCACAGTACTGGACAGTTTTGTCGTGATGATGTCCGCCTGCCCTCAGCCTGAGTGTTGTACCACACAGAACAACACACAGCACAGAAGGTCCTGCACGCGGGCATGATGGTGACGGTGACTGATGTCGACATGGTCTGGGGTGGTATCCAGGGAAACATGATGGAGTCTTGAGGGAAGGAGAAGTCACACCCTCGTAACTAAAAAAGGAACAGTTGCCTGTATTTACTGACCCCTGTTCTCAATTCAGCTTTAATGCTATTTGCTCACTGAAGCTTTTTTGTGCCGGCCATGTGCTCTGTCCACATGGAATACCAGCTGGCTTCCTGTGACTCCCCATTTAATTTGCAGAGTCAACACCGTGGTGTAAGTAAGAACCCAAGCTCCAGAGCCAGACTGCCTGGGTTTGAACCCCTGTTCCACTGCTTACTGTCTCTATCATGTATCGGGTTCTCATCCATAAAAAGAGGGGTGTTAATATGACTAACAGCACATATGATCGTATGAAGATAATGCTGACTTTCCTGTCCATGCTGGCGCATAGATGGTCAGTACAGATACCTTGTCATGATGGTTACCAACCTCTCCTGGGGTCTCACTCTGGCTCCCATTAGGCTGGCGTCCCCTTAGTGCAGGAGCTGTGGGTGGTTCATCTCTGTGTCCCCCACAGCACTCACTGAGCTGCTGGCAAAGAGCTTCAAGGATCAGTGGCAGGAGATCTGGGGAGACTGTGATGAGTGCCTCTGAGTCTCCCTGCACC TCONS_00147138 s 5' 1832 TCONS_00147138 s 5' 2803 EMBV3_36688 TTGGGAATTTGAAACCATGTGGGTGTTAGTAACTAGGGGAAGAAATGATTATCCTCTTTA Gene GeneID:522863|NMNAT1:NM_001075834:79_cdna Constitutive 2 NULL GeneID:522863 16 GENE NMNAT1 MGC139127 nicotinamide nucleotide adenylyltransferase 1 EMBV3_24058 AGCAGCCAGTGGGCAGGAGAACGGCAGAGCGGGATCCCAACAAGCCCTCAGGATTCAGAA Variant GeneID:614675|PDLIM1:NM_001035455:228_cdna 637^788 1 EMBV3_35916 GeneID:614675 26 GENE PDLIM1 NULL PDZ and LIM domain 1 EMBV3_34607 TTAGTAATGTACCGGAGCTAAATGACTGAAGCTTTAGGGGTGCATAGAAGCCACCGTAAT Gene BVT0101_018298 + 0 NULL GK000022.2:28507496-28775477 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128398 TCONS_00128397 TCONS_00128396 TCONS_00128400 TCONS_00128399 1 XLOC_077883 Coding TCONS_00128397 XLOC_077883 Coding Coding PPP4R2 22:28772111-28823775 j TSS95798 4792 1 TCONS_00128397_1 374 9 0.90741923620386 5.86785416869553e-12 1.33154210646189e-07 2.54469643974419e-10 1.35189634332497e-05 1.76483044616386e-08 1.94964601217112e-08 0.000101009338525324 0.000315696252756021 0.000192919110469353 0.00059933891018871 1.56791948912177e-05 0.000326158285152201 1.17198905465181e-11 0.000467093500350032 0.000508550394616804 8.16774238590811e-06 0.00280741474288799 0.0072932557713829 1.51551996215185e-06 0.000348265766129893 1.45131024881795e-09 0.00257923592328607 0.00128045171753726 1.6875431958084e-05 1.46385177392714e-17 3.14065479856739e-05 1.47976576765299e-10 4.73472455435426e-08 5.86773346397204e-08 5.59147191103679e-05 XM_581095.7 PPP4R2 PREDICTED: Bos taurus protein phosphatase 4, regulatory subunit 2 (PPP4R2), transcript variant X2, mRNA. 0.0 4778 100.00 0.552587646076795 XM_005264714.1 PPP4R2 PREDICTED: Homo sapiens protein phosphatase 4, regulatory subunit 2 (PPP4R2), transcript variant X1, mRNA. 0.0 3901 90.55 0.5830550918197 TCONS_00128397_1 sp|Q9NY27|PP4R2_HUMAN PP4R2_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 2; 0.0 637 91.56 0.997326203208556 1 coding 1 1 1 1 0.0129874508237158 0.939141267470904 0.0320467336875583 0.5148829242445 CCCTCCGTGGCCGCCTCTCCGTTCCCTTCTGGATTTTGAGAAGAGGGGGAAAAAAGAAGTTTGTCCGGTCCTGGATCAGTTTCTTTGTCATGTAGCCAAGACTGGAGAAACAATGATTCAGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAGGTGATGGATGATTTCAGAACTTCAGCTCCTGAACCAAGAGGTCCTCCCAACCCTAATGTTGAATATATTCCCTTTGATGAAATGAAGGAAAGAATACTGAAAATTGTCACTGGATTTAATGGTATACCTTTTACTATTCAGCGACTATGTGAATTACTAACAGATCCAAGGAGAAACTATACGGGAACAGACAAATTTCTCAGAGGAGTAGAAAAGAATGTGATGGTTGTTAGCTGTGTTTATCCCTCCTCAGAGAAGAACAATTCCAATAGTTTAAATCGAATGAATGGTGTTATGTTTCCTGGAAATTCACCAAGTTACACTGAGAGGTCTAATATAAATGGGCCTGGAACACCCAGGCCACTTAATCGACCAAAAATTCCTTTGTCAGTTCCCATGACAACAAACGGCTTGCCTGAGAGCACAGACAGCAAAGAGTCAAAGCAAAATGAGGACAAAAATCACAGTGACTCTTCAACATCTGAATCAGAAGTTTCCTCGGTGAGCCCTATAAAAAACAAACATCCAGACGAAGATACTGTGGAGGCAGAAGGGCATGAGGTAAAAAGACTCAGGTTCGACAAAGAAAGTGAAGTCAGAGAGATGGCCAGTCAAACATCTTCCAGTGAAATTTCTTCAGTTATGGTAGAAGAAACAGAATCTCCATCTTCATCTCAGAATAAAGACAAAGAAAGTAGTTGTACCAGGCAGCACTGTACAGAAGAGGAGGAAGAAGAGGATGAGGAGGAAGAAGAAGAGTCTTTTATGACATCAAGAGAAATGATCGCAGAAAGAAAAAATCAAGAAAAAGAATCTGATGATGCCTTAACTGTGAATGAAGAGACTTCTGAGGAAAATAATCAAATGGAAGAATCTGATCTGACTCAAGTTGAGAGAGGTTTACATTCTGAAGGTAGTGAAAATACAGGCCCTGTAAGTAGTGGTTCTGATTGCCATGAAACGGAAGAATTAGTAGGATCCAATTCCAGTAAAACTGGAGAGATTCTTTCAGAATCATCCATGGAAAATGACGAAGCCACAGAAGTCACAGATGAACCAATGGAACAAGACTAACTATTTAGAAATATTTAGATGCAGTATTTTACATACAGTTCTGGTTTTACACTGTATAAAACGTTTATGTAACAAAGTGGACCTTTAGTTTTACAAGAGAAGCAGGTTGTAAAATAAAATACTTTATGGGGTAAATCCTAAAAGAGTTATTCATGTGAGAACTGTGAATATCAGCTCCTCTGGGTCCTGCTTACCGCTGACTTTTTTTTGGTCTGGTCAAATCAGTGGTTTGTGTATAGATTTTTTTTTTTTTTTTAGGGTTAAAAATTTTAAACTGGAAAATAATTATAATTTTGAAAACTTTTTTGGAGATTATCACACTTAGTTTATTACATATGCAAGAAAGCTTTTGTCTTGTCTCTTTCTGACAGCTCTAGTAGTTTTCATATTTTGGTCATAGTTTGAGCATTTTAACATGTGAACTCTATAGGGTTTCATGCTGGTTTCCAGATTTTATTGTTTGACTATGTACAATGGAACTTTAAGTCATATATACATATATATATTATTCTAAGGGGGAAATGTTATATTTTTCTGTTTCTATAAGAGATGAATACAGTGGATACTTTTTCTATTGGTAATGATTGAGTTCACCTCTTTCAGAAGACATTTTCTTTCTCTTCTGAGTAATTCAGATAAAATCTGGCCCCTGTGAAACCCTGGAAATCTTACGTCTGTTGAAATACCAGGTTAAACACATTCCAAGAGATCTGTTCAAACTAAATTCTTTTGTATACTTCTGAGGTGCCTGAGAAAAAGACTACATTATTTATGAGAAAATGTGCTTTATCTTGGAAATTGTGTTCAAACATTTAGCTTACTATTTTGTAGAATGAATGCTTATAAAGCTGACATGAGACCATCTCAGAAGAACCAGGCTGGTTCCTTTACTTTTTGCTTGCTTTTCTGAACCTTGTGAATATTACACATTTCTTTCTAAATTATTCTAGAGTATACAAATGTCAATGGTATGAAACACCACTGTACTGGAAAAATTAATATATTACTTTAGTAATGTACCGGAGCTAAATGACTGAAGCTTTAGGGGTGCATAGAAGCCACCGTAATTTGTATGACATTTTGAAGTGAATTAAATATTTTTGAACATGCTTCTTCGACAGCCAGTGTTATATTTTTCAGATCAACACAAAGCACAATGGTTACTCTAAACTCAATATTTTCAAATTCACATATTTAAAAGTCATGCGCAAGCTGCAACTTCCCTGTCTAAATTACTGGCTGCCAAATTTATACCTGTTTCTTCAGCTGTACCTTTTGATATTTAGAATTTTTAAATTTCTGTAAAGTAGATTTTGTAGAATGTAATGTGTTCACTGCCTTTGTGAAGCGGTATATAATTGTATAATTTCTGTGTGTAAACTGAATGCTTGGGCTTTCAATACAGTATTCATATAAAGCAATAAATATTAATGTTATGAAATACTCGAGTACATTTTTATCAAAATATACAAGAATCCCTTTTTTAATTTCAGATACCTGAAGTATACAGATGAACTGATAAAACCGATGCAAACATTTTCTCACACTGTATCATACACTCTGGGGTGACTTGGGCAGCCACCACAAGTTTTGCATTTTGACTACTTCAATTGCTATGACTAAAACTACCAAAATGAGCTGGCTCCGTTTATGTCTGTCGGGTATTATACTACTGACTGACTTGATTGTCAGGTTCACAGCAGCTAGATGATATATTTGTGAAATATGTCTCATAGTTGGAATAAAAACTGAGTATTGATTTATTTACTGTATCCAAGAGAGAAGAAAAATCACACATTGTAAATTTTTTTAAGAACTTTGCAAAAAATGTTAAAGCAAATTTTAAATGTGACATTCATTTGTAGTGACCTATTCTTTATTTTGTTAAGGGATATTTTGCCAATGAAAATAGATTTTAAACATTTTAAGTTTAGAAATTTTGAAATTTTCTTTAGAATATTTATGAAATCATTGTCAATAAACCTATTCTTTAAGATCCTGTGACCTTTTGATATTTTTTATTTTAATTGTGCCATGGACCACTTGTAAACTGAATTACTTTTGTTGGATATAAGTTGAAGATTTAGCATCATGACTTTGAGGTCTGTGGTTTTATTTGTATACTTGCAGTTGCTATTTTTGCAAGGGCAAATGTATTTCTTTATTAAATAAAGTATAATAATGGTGAATGTACCAAAATGCCATCACTCAACTCTATGAGAGATCTGCATTTTAATCTATAGTGTAATAGTTTTAATATTTATTAGATATTCTTATGTTGATCATAGATCAAACTTGTTGCTGTTTATACAGATAATTGTAGAATGCTCATGGAATATTTTCTTTAGGATAGATGGGATACTTCTGTAGTAAAACTGGGAAACCTTGTTCAGCTGGTTACTGATGTCTGGTGGGAAGTAAACTTCCTCATGTATGCATAGATGCACTTACAGAGACTTTGCTTCATGAAAATGTCAGTTCTGATAGTAACGGATTCAGATGTGTACTTTTAAAAGGCTAATTTTAGGAACATTTTCTTAACACACATCAGCAAAGTCATAAAAGATCTAAATGAAGAAATAAGACCTCTGATTAAAAATATTATTTTCTGTTTGTCTTGAGCAGATTGTTTACCTGTTAGACTCTAGACTCTGAACCCAGCATGTAAAAGAATTTGAAATGCTAATGAGAGTGAGAATATATATGTAATATGTTTTTAGCACTTTTCCTTTTAAAAAAGTAAAAGCACTCTAGAACATTTTTAAAAATAAATCTTGGGTTCTGAAAATATTGGTGAACAGAAATGAGCAGTGGGAAGTGTCCTATTTTAAGTGTTGATTATTAGATAAATTTAATCCACTTAGGGTTTATTGTAACTAGGCCTTTGAAAAGTGTGGGTGGAGGATTAGAATTGCCTATCGGAGCTATAAAAACCCTCTGGCTTGAAAAGGCATCCCAGAAATTCTGGATAAGAAGGTGTGGCCTGTTAAAACATGGAGGTTCAGAGTATTTTGTTTTGCTGGTGTAGATAGGCATGTACTTATGCATTTTTGCATTTGTAAAATCAGCAATTTTTCAGATAATGTAATATACTAGTTTACTTATAAAGGTACTTGGGGCAGAATCTAAAGCTATGATGTTTGATTTTGAGAAATGTAACTTGTGGTAAGGACAGAAATGCAACTTGTAGAACCAAAGGAAATAAAAATTCTGGATAGTGTTTCAAAATGTCTTTTGAACAGGAGTTTCTTAAATACATTGGTTTTGATCAAATGAAGCTCAGTTCTCTCTTGAGATTTGTGCTAATCATAAGATGATTGAATGCAAAAACACCTTGTAATTTCATATGGACTTATTATAATTAGGTTTATTGGATTATTGGCCTAATAAGAATGCTAGTATGTATTGGTTAGAATATATCTAATATTTCACATTTTAAAAATAATTAGTATACTTTCTTCAGAATTTTCTTTTATTTCAACTTGGAGCCTAGATTACTTTGCCAAATAAATGTATTATTTTCATAATGCAATAAAATATAAATTAGAAGAATTA EMBV3_21747 GGTGCTGAGTCCCAGAGAAAAAGACTCCGCGCGCCTCTCTGCTGTATACTGTGGTTTATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03191 AGGCAAATAGATTTTACTGCTGAGTTGAGAGACTTCTTTACTCCAAATGCACTTCATCAG Gene BVV0102_252996 + 0 NULL GK000020.2:62932708-62936739 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20759 TCTCGCTCTGATTTCTGCATCCTTCCATGGTGCCCCTCTGAGCGTTTCACCAAAGATCTA Gene GeneID:512905|APOL3:NM_001100351:191_cdna Constitutive 1 NULL GeneID:512905 5 GENE APOL3 NULL apolipoprotein L, 3 EMBV3_07820 TGAACCTCATGGAAGAGAAGCAGGTGATTTTGAAGCGGCAGCAAGAAGAGGTCAGCAAGC Gene GeneID:540820|CATSPER3:XM_002689192:60_cdna Constitutive 0 NULL GeneID:540820 7 GENE CATSPER3 NULL cation channel, sperm associated 3 EMBV3_12876 GCTAGCAGGAAGGATATAAGATAGAGAACTGTGGCCAATTGTATTTCCCAAAGAGAACCA Gene BVV0102_080345 + 0 NULL GK000003.2:27982018-28015171 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09520 GGAACAGCACAATTAGTGCACCTCCCCCGCTAAGCTGTGCACAATACACACACAATAATC Gene BVT0102_333329 - 0 NULL GK000011.2:22370786-22442323 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027232 TCONS_00027228 TCONS_00027229 TCONS_00027233 TCONS_00027225 TCONS_00027230 TCONS_00027231 TCONS_00027226 TCONS_00027227 TCONS_00027234 1 XLOC_015206 Coding TCONS_00027233 XLOC_015206 Coding Coding SLC8A1 11:22439014-22824538 j TSS19347 7668 1 TCONS_00027233_7 970 0.0262128325508607 12 0.980141262648402 0.000628028959461099 0.000135737974440323 0.000253377842864783 0.000198029386294221 0.000349745465242802 2.16111482934779e-05 0.000124019864064984 0.000114014933743431 0.000257181548797243 2.98551548035479e-71 2.19038762590806e-47 3.06002863260269e-30 1.85752478374348e-06 1.53301546408586e-65 1.33619166839121e-06 4.91981965509365e-19 1.00582545940185e-12 1.71930790587987e-254 0.000213226497870203 0.000227846971647583 7.87491191561188e-05 4.55339807991736e-31 7.67515848731193e-34 3.32765752986666e-33 0.000623220808547173 0.000213363960271259 0.0011442200860427 4.91302039601979e-25 1.70607771978319e-70 1.1615763080259e-153 XM_005212567.1 SLC8A1 PREDICTED: Bos taurus solute carrier family 8 (sodium/calcium exchanger), member 1 (SLC8A1), transcript variant X9, mRNA. 0.0 7106 99.92 0.514736567553469 NM_021097.2 sodium/calcium exchanger Homo sapiens solute carrier family 8 (sodium/calcium exchanger), 0.0 6489 83.70 0.782472613458529 TCONS_00027233_7 sp|P48765|NAC1_BOVIN NAC1_BOVIN Sodium/calcium exchanger 1; 0.0 1991 99.79 0.998969072164948 2 coding 0 1 0 0 -0.110873433626387 0.355294949853231 0.0188172333224009 0.8427576659745 ATGCAGGTTCACGCTTGAGGAGCATTGGCCTAGAACATGATTCTCAACCTTGGTTACACATGGGGCACCAACCAGGGAAACTTAAAACTTAAAAATAATTATTGATGCCTGAGCAACCCCTCACCCACCACCCCCGTGGAAGAGATTCCAAGATATTCTCTCTGGGGTGTGGCCTAAGCATTGGGATTTTTAAAAGCTCCCCAGGAGATTCTGAGGTGCTGTCAGAATTGTGAACCACTAGCAAAAAGGCAAAGGAGAGCTACTTTTCCTACCCCTCACACTCTGCCTCACAGTCAAACAGCGGGTTTCCTGGAGTCAGAGTTTCTCTTTTCCTGTGACCTGGCAGCCCAGAGCCCGGCACTGCCACTGATCTTCCACACTTAAGCAAACCACACCAGTGAGTGGCGAACATCAACTCGTGCTTGAAAAATACCAACTTGGAGCCCGGTTTGAGAAGCTACATCAGAGTCTCGAGATGCGACGCTACAATCTGCAGTTTTCACTAGCTTCCCAGTAGGTTGGGACAGTTGGAACTCTGCCATTGCCCAGCATGCTGCAGTTCAGTCTGTCACCCACCTTGTCGATGGGATTTCACGTGATAGCCATGGTGGCTCTCTTGTTTTCCCATGTGGACCATATAAGTGCTGAGACAGAAATGGAAGGAGAAGGCAACGAGACTGGCGAGTGTACTGGCTCCTATTACTGTAAGAAGGGGGTGATTTTACCCATTTGGGAGCCCCAGGACCCTTCCTTTGGAGACAAAATTGCTAGAGCGACTGTGTATTTTGTGGCCATGGTCTACATGTTTCTTGGAGTCTCAATCATTGCTGACCGGTTCATGTCCTCTATAGAAGTCATCACGTCTCAAGAGAAAGAAATCACCATAAAGAAACCCAATGGAGAGACCACCAAGACAACTGTGAGGATCTGGAATGAGACAGTGTCCAACCTGACCTTGATGGCCCTGGGGTCTTCAGCTCCAGAGATTCTCCTTTCAGTAATCGAGGTGTGTGGCCATAACTTCACTGCAGGAGACCTTGGCCCTAGCACCATCGTGGGGAGTGCTGCATTCAACATGTTCATCATCATTGCCCTTTGTGTGTATGTCGTCCCGGATGGGGAGACAAGGAAGATCAAGCATCTGCGTGTGTTCTTTGTGACAGCAGCATGGAGCATCTTTGCCTATACCTGGCTTTACATCATTTTGTCTGTCAGCTCCCCTGGGGTCGTGGAGGTCTGGGAAGGTTTGCTTACTTTCTTCTTCTTCCCCATCTGCGTTGTGTTTGCTTGGGTGGCAGACAGGAGGCTTCTGTTTTACAAGTATGTCTACAAGAGGTATCGGGCTGGCAAGCAGAGGGGAATGATTATTGAACACGAAGGAGACAGGCCATCTTCCAAGACAGAAATTGAAATGGATGGGAAAGTGGTCAATTCCCATGTTGACAGTTTCTTAGATGGAGCCCTGGTTCTGGAGGTTGATGAGAGGGACCAAGATGATGAAGAAGCCAGGCGAGAAATGGCTAGGATTCTGAAGGAACTCAAGCAGAAGCATCCAGAGAAGGAAATAGAGCAATTAATAGAATTAGCCAATTACCAAGTCTTAAGTCAGCAGCAAAAAAGTCGAGCGTTTTACCGTATTCAAGCTACCCGCCTGATGACCGGAGCGGGCAACATTTTAAAGAGGCATGCAGCAGACCAAGCCAGGAAAGCTGTCAGCATGCATGAGGTCAACACGGAAGTGGCTGAAAATGACCCTGTCAGTAAGATCTTCTTTGAACAAGGGACATATCAGTGTCTGGAGAACTGTGGCACAGTAGCCCTGACCATTATCCGCAGAGGTGGTGATTTGACCAACACTGTGTTTGTTGACTTCAGAACAGAGGATGGCACAGCCAATGCTGGATCTGATTACGAATTTACCGAAGGAACTGTGGTCTTTAAGCCTGGTGAGACCCAGAAGGAAATCAGAGTTGGCATCATTGATGATGACATCTTTGAGGAGGATGAGAATTTCCTTGTGCATCTCAGCAACGTCAAAGTATCTTTGGAAGCCTCGGAAGACGGCATCCTGGAAGCCAGTCATGTCTCTACCCTTGCTTGCCTGGGATCCCCCTCCACTGCCACCGTGACTATTTTTGATGATGACCATGCTGGCATCTTTACTTTTGAGGAACCGGTGACTCATGTGAGTGAGAGCATTGGCATCATGGAGGTGAAAGTTCTGAGAACATCTGGAGCACGTGGAAATGTTATCGTTCCCTATAAGACCATTGAGGGGACCGCCAGAGGTGGAGGGGAGGACTTTGAGGACACATGCGGAGAGCTCGAGTTCCAGAATGACGAAATTGTCAAAACAATATCAGTCAAGGTAATTGATGATGAGGAGTATGAGAAAAACAAGACCTTCTTCCTTGAGATTGGAGAGCCCCGCCTGGTGGAGATGAGTGAGAAGAAAGCCCTGTTATTGAATGAGCTTGGTGGCTTCACAATAACAGGGAAATACCTGTATGGCCAGCCTGTCTTCAGGAAAGTTCATGCTAGAGAACATCCACTCCCCTCTACTATAATCACCATCGCAGATGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAGGAAGAGAGGCGCATTGCGGAAATGGGGCGCCCCATTCTGGGAGAGCACACCAGACTGGAGGTGATCATTGAAGAATCCTACGAGTTCAAGAGTACCGTGGACAAACTGATTAAGAAGACAAACCTAGCCCTCGTGGTTGGGACGAACAGCTGGAGAGAGCAGTTCATCGAGGCGATCACTGTCAGTGCTGGGGAAGATGACGATGACGACGAATGTGGGGAGGAGAAGCTGCCCTCCTGTTTTGACTACGTGATGCACTTTCTGACTGTGTTCTGGAAGGTCCTCTTCGCCTTTGTCCCCCCGACAGAGTACTGGAACGGCTGGGCGTGTTTCATCGTCTCCATCCTCATGATCGGCCTACTGACAGCTTTCATTGGAGACCTCGCTTCCCACTTCGGCTGCACCATCGGCCTGAAGGATTCCGTGACCGCGGTGGTGTTCGTTGCGCTTGGAACCTCAGTGCCAGACACATTTGCAAGCAAAGTGGCCGCCACCCAGGACCAGTATGCGGACGCATCCATAGGTAACGTCACAGGCAGCAACGCGGTGAACGTCTTCCTGGGCATCGGTGTGGCCTGGTCCATCGCCGCCATCTACCACGCGGCCAACGGGGAACAGTTCAAAGTGTCCCCTGGCACGCTAGCTTTTTCTGTCACTCTCTTCACCATTTTTGCTTTCATCAATGTGGGGGTGCTGCTGTATCGGCGGAGGCCAGAAATTGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTCCTCACATCCTGCCTCTTTGTGCTCCTGTGGCTCTTGTACATTTTCTTCTCCTCCCTGGAGGCCTACTGCCACATAAAAGGCTTCTAAAGGAACAATCAGATGTAGTAAATTTATATATATATATACATATATATATATACATAAAAATTATGTATAATGAACAGAGGAAACTGGCATTTGTCATGTCCACCCACCTGCTGATGGAATCCAGCTTCAAGAGCAGACTCTGTACTAGGGCCGGAGAGAGAAGGCATCACCTCCCGTTCCCAGGGGCGTCGTCTTGTTGAACCAGGCATGGAGGCAGGGCCATCTTTGCAGCTCAGCCCAGAAGGGCTGTGTTCTCCCCGGGTTCATAAATCCTTAAGTCTTTGATTTGTTTTCTGTTTTTGCTTGTTTTGGGTCGGGTTGGGAGGTGGTTGATGTTAGGGTTTGGTTTTGGTTTTGCAGGGGGAAGATCAGGGTTTGTGGTCCTCTTGTGGGAGGTGATGTCCAATCTCAATGGTAAAAATGGAAATCAGGAAGATGACTCTCCCTTTGCCCAAAAACTTTAAAAATTATTTTGGAGTAAGAAAGGAAACGGGCATGGAAGAAGAAAGAAGCATGTCTTCACCATATTACTAAATTTCATGCTTATCTCTGGAGTGGGAGCAGAGGTGAAGCTCCCTCCAAGAAGAAACAGGGGAGCTGGAATGGAGCCAAGAAGAGTCATGGTTCTAGATACAGTCTGATGTTTAAAGATACTAGGCCTGGCACCCTTGTTCAACAGGTACAAAAACAACATGCCTAGATTCCCAGGAACGCACAAAGTCCTTTCTTCTCTCTTCAGCGCTGGACTGTGATTAGCAAGGCCCTGATTCTGATGTTCTACACCCGCTGATTCCCCAGCCCTCCCATCCCAAACCCCTTCTCCTGCCCTTTACCCCTCGTACAAACAGGAAGAATAACTCCATTCAAAAAGCACACCATCCTTTCCCATTCGCATCAGTCTGTGCCCCATGTTGCTACTGCCTGGGATTGTCCATCAGTTCTGTTTTCCAAGGCACCTGTGGCCTGCACACTCCTGTTCCAGTCATGATGGAACATTTGCTCCTCTTTCATCTGCCTGTTTGGGAATGTTGTTGTGATACCTGTTACACAGTGCATGGATGAAAAATACAACAAAACAAAGCGTATCTGTATATAGTAGAGTATAGCATATACTGTTCTCCCATTTGGCGACATTGATTGGACATTGAAGACGTGAGTGAGTTTTCTTTTCACCTGAGTTGTAACTTTTGTGTTGTTATTGAGTTTGATTAGGGATAAAAGGAGAAAATGGCTTATTGTTCATGGATCTGCACGTTCATTTCTAAGAAACAATAACTGTTACGTGGGAGTTAAAGCTATTGAGAGGACAGCGGGCACGCGACAAAGTATCTTCAAGGAAAATTAGCCGCGTGGTGCATATCAAAGCCTTGAAAACTCACCTGTTGGTTCAGGAAGGCCAAGGAGAAGGGCTGTGTAGAGAAGGGGATACGTTAGATGTGCCTGGGCTCTGAAAGCCTCCGTTCCTGGAACACCCCTGCCCCAAAAGTATTTATTTCACATCTGCTCTGTCTGGCACAGACGGTAGATAGTGCTGGTTTGTTCATTTTATTTTTTTATGTAAAAGGCTATTCAGAGCCCCATTTTTTTCACTGTCCAGACCCCTCTGATAGTATCTGCAGTTCCTGAGGAGAAAAGAAGCCACAGTGAGCAACAGGCCTTTCAAAGTGTGTCTTCTCTACGGAGGGCTGAGGAGGAAGTGATTAAATGAGATGATTAGTGCCTCTCCTAGGACTGCTCTGGGAGGTTTTTAATCCTGGAAACGGAATGGCTCTATTTCACAATATCAAAGAGCATGATAAACCCAACATTCCAAAGCTGTGAGTCCACAAATGAGGAAAAATGGAATGACTTAGGTCCCCTCTCAGACATTTCTCTATCCATAAAGAATCCCAGGCCGGAGACACCCCTAAGCCCTCTGTGTTGTTTCAGAGATACATAACTGATAATAATCTTCATTTCTTATTTTCTCTTCTTCCACTTAGTAATCACAATCACTCATCATGTAATAAAAACACTGGCTGACTGAACGAATAAGGAAATGCTGAGTGCCCACCCAATCTGCCCAGTGCTATGCTAGGACTTGGGGACTAACCATGGACCAGACAGCCCAGATCCCGATCCTGAGGGGGTTCACAGTTAACCCCTGAGTAACAGTTAACACAGCCATGTGGAAACAATTTGATCTTACAAGAAAAACACAATTGCTGAAATTCTCTTGCCTAGATGTCTAAGATTTTCTTGAACTGAGAGAGTATAAGGCATATGGAAGGGGCAGCAGTCTGTGTATCCTGAGCCAGTCTTGCAGATCTGTACACCTTTCCATTTTAAACCAAGTAAGGAAATCCTGCTGATGACCCAGCTGTCTGAGAAATCCCAATTAATCCCAATTTTTGTCTTCAGCTGATATTTGTTGGACAGCAGTACTTTTCCATGCCCCCTGCAGCTCTAATTTCTCACATCTCCTGGAGCCTCAGCCCTGACCTGTCATGGCCCAGCGCACTGGTGGCATAATCCTAACCCATTTTTTTCTGGAGATTTATTTAATGAAAAGCTAGCCTAGAAACACCAAGTAAATAGTCAAGAGAGATGAGTTGTTTAAACATTAGAAAGACTTTGCACTTCTTTCTAGCTATATTTGGAATGTTAATAATCCCATAGCAAATTTTCACAGAGGATGTTAAGAAATCTTTACCATTGGTCAATTTCAATTTCAAAGCTTTTTGGTTTGTTTGCTTTTTAAATTTTCATGTTACAGGGAAAATACGATTCTAGTTGTTCAGGGTTGTTTTAGTAATTATAGTCATGTAAAATTATTTCCTTTTGTTTGATTATTGTGTGTGTATTGTGCACAGCTTAGCGGGGGAGGTGCACTAATTGTGCTGTTCCTTATAAATGGTACACATTATTGACACAGACAAATAAAGTTTCTAATGATTTCTGATTTAATCACTAGTGATCCAGCATATTCTGTACGGAATGTTTTCTCTCTTCTCATTGTCATCTACTTCATCTTTTGTTTTCATGTTTTGAAGAAATAAAGACCCAAAAGGTATTATTGTGCCATTGGTATCCTCATCCACAAGAAAGAACATAGATGCCCAGGAACCACCTTACAAATGTCAACCCTTGGTCATGCGTTGTCTGCTTTGAATGTCCCAAGGGAGCACAGTGTCTGACTGCTGAGATAAATGATACCTTATTCATCTAATTGTCTTTAAATTTTTCTTTAGAATTCCTCATTATATTCATATATGGTCATGCATGAAACACTTTCGTATGTGAAGGTAATTTTCTTGGATCAACAATTAGTATGTATCCTGGGACCCAATCTTTGGTTTAACACAAAATAAGCAGCCAACATTTACTACTGTAACAGTAAAAGGGATAATTCAATGACCAGACTAGCCTTGACTATTGAGCAACTATTCAGCACAATGCTGTGGCCCAATGATTCTAATCTCTTATAAGCTAATTCTGTTCTTTCAAAGGTTCCAGTTCAAGCCTTCTACCAGTGGAGATTTCATAGAACTTTGCTTTTACTATTCATGGCATAAGCGCACTAAGTTTTTCCTTCTTATAATCTTTTCTTGAAAAGCGTACTGTCTGTCTGCAATTCTGAAGCTATTCTGATAGGTGACTGTCATCCTATTACATTTCCTAATATATACCTTCCCTCCAGTGGTCTCACTATTAATAAAAAGATCACCGTACACGTAGTTTTATCCACAGGGGGCGTGATTCACTGTTGATCCCACAGCCCTGCTCCTAACCTGTCAAAGTGAGATTCACCAGTCTGTGCTGCATACATCAGAGAATGTTGTAGAAGCAATCAGAAAAATAACAAATATCCTCTAATAGATGACGAAGTCCTGCATTCTCTAATGGTGACAAAACTTCACTTTCTCAAGAATGTAAATCAGCTCCTGTAAGATTTCCTTCAGTGTTTCCTGACCCAAGAAATGAAATCTCTCTTGATTATGGTTTTCTCTGTCTGATAGTGGGCAGTTATAATCAGAGCAAGTCTTGGGTATAGTTTCACAACTTCAGGAATATCTGGTCATTTCATAATCAGCCATGTACAACACTGGATCTTACCGTAAATCTCCAATGGCACTTGGTTTTGGTTGTAGTCATTGTTTCTCTTGGCCAAGAGAAGTAAAATCGAGCATTTCAACTGATAAATAAGGGTATTACATAGACGAGAC EMBV3_12625 GTCTCCCCGTCTGGTCAGGAACCTGTTTGCAAGTGAAGCAATATCTCCGTGTTTTGTATA Gene GeneID:532723|RAB11B:NM_001035391:63_cdna Constitutive 0 NULL GeneID:532723 7 GENE RAB11B MGC127954 RAB11B, member RAS oncogene family EMBV3_19915 TCAGGGAAACCCTCTGCCACCTCAGATATTTCCAAGGAGAGCAACACAGTCTTTTCATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04376 TTGCTGTTCACCAGATGTAATGTTTTAGTTCCTTACAAACAGGGTGGGGGTGGGGGAGGG Gene GeneID:528135|HNRNPK:NM_001034562:40_cdna Constitutive 3 NULL GeneID:528135 8 GENE HNRNPK HNRPK MGC127613 heterogeneous nuclear ribonucleoprotein K EMBV3_40118 CTCGGTTCACCTCTGAACTGTGGACAATAATCCATTCCTCCCCCCAAAGAAAGTCCTGGG Gene BVV0102_411531 + 1 EMBV3_38679 GK000013.2:64900583-64913635 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03603 GAGCAATCATTGTAGAACTACTGTGCCTGTAAACCTGTGGATTCTGACATTACCTCGGGG Gene BVT0102_010360 + 0 NULL GK000015.2:35837712-35867459 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32368 AAGCCATGAAGGCAGCAAAGGGTTTGACCTGGTAGACTCTAAAAACTTGAAAAATGCAAC Gene GeneID:510518|LLPH:NM_001038522:980_cdna Constitutive 0 NULL GeneID:510518 5 GENE LLPH C12orf31 MGC133594 LLP homolog, long-term synaptic facilitation (Aplysia) EMBV3_27382 CTTTTGTTAGTTGTTAATTAGGTGTTTCTATTAGACCAAGCTTTATTCCTAGAGATGCTG Gene GeneID:506159|GPR52:NM_001100304:58_cdna Constitutive 0 NULL GeneID:506159 16 GENE GPR52 NULL G protein-coupled receptor 52 EMBV3_03081 GTCTCCACTTCCTCCAATGGGAACTAGAAGAGCATATCTTGGGGTGGCTGCACTCAATGA Gene GeneID:785293|IPP:XM_002686420:380_cdna UTR3_Alt 2 NULL GeneID:785293 3 GENE IPP NULL intracisternal A particle-promoted polypeptide EMBV3_41297 GAAAGCTGTCCTTCTTCAACGTATCCGACGGCTCCCACATTTTCACCTTCACCGACACCT Gene GeneID:100125313|BTNL9:NM_001103345:2_cdna Constitutive 0 NULL GeneID:100125313 7 GENE BTNL9 MGC157148 butyrophilin-like 9 EMBV3_25903 CTTTGACATCCCACCACCCCCCATGGATGAGAAACACCCCTACTACAAGTCCATCAGCAA Gene GeneID:515067|PGAM2:NM_001038111:41_cdna Constitutive 0 NULL GeneID:515067 22 GENE PGAM2 MGC134078 phosphoglycerate mutase 2 (muscle) EMBV3_01123 GAAGAGAAACAGGATATCAACCAGCAGCGTGTCCGGCGCTATGCCCAGGCCTTCTGCCAC Gene GeneID:614878|TRPV6:XM_002687016:64_cdna Constitutive 0 NULL GeneID:614878 4 GENE TRPV6 NULL transient receptor potential cation channel, subfamily V, member 6 EMBV3_23316 TGGCAGCAGTAATGAGGAAAGCCATTGAAATTGATGAGCAACAGGGTTGCAAGGAACAGG Gene GeneID:532881|FGFR1OP2:NM_001102147:14_cdna UTR3_Alt 4 NULL GeneID:532881 5 GENE FGFR1OP2 MGC143105 FGFR1 oncogene partner 2 EMBV3_34278 CTCACCTGAGCCTTCATATTAGCCTTCTAATTAACCTTCCATGTATGGTGACAGCCCACC Gene BVT0102_422928 - 1 EMBV3_13098 GK000020.2:22341418-22358696 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17868 ACCAGTGTCGAGACGGCAAAGTGGGCTTCCAGAGCTTCTTTTCGCTAATCGCTGGGCTCA Gene GeneID:282466|S100A10:NM_174650:28_cdna Constitutive 0 NULL GeneID:282466 3 GENE S100A10 NULL S100 calcium-binding protein A10 EMBV3_11824 TCCTTGGTAAATCCTGCAAGCCCATCCCAGCTCTTGTCTCTAACCCTCGATGGACTGACC Variant GeneID:353217|SLC35B1:NM_181338:44_cdna 479^636 1 EMBV3_38379 GeneID:353217 19 GENE SLC35B1 ERNST MGC128601 UGALT2 solute carrier family 35, member B1 EMBV3_22826 CCCGAGGACAAACTACAGATTGCTAGACACATCTGATAAAGAATTGTTATCTAAGATACG Gene BVV0102_360950 - 1 EMBV3_30138 GK000008.2:48782110-48892496 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00231363 1 XLOC_140852 NonCoding TCONS_00231363 XLOC_140852 NonCoding NonCoding - 8:48888885-48890348 - TSS172867 1463 3 TCONS_00231363_2 49 0.226930963773069 1 0 0 0 1.89760831798324e-05 0 0 0 0 0 1.07862465972865e-05 9.84327443127988e-05 1.25177658276804e-05 6.84340554851653e-05 0 0 0 0.000758228859031355 0.00114616056893775 0.000137202477845777 4.90152533975869e-06 0 0 0.000197816943438541 5.64365006697431e-05 4.5836173271059e-05 0 1.92630644190682e-05 0 0.000420185210240476 0 0.000127395724288858 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 2e-62 244 86.05 0.145591250854409 XM_005252191.1 ZFAND5 PREDICTED: Homo sapiens zinc finger, AN1-type domain 5 (ZFAND5), 7e-43 179 68.91 0.280246069719754 0 noncoding 0 0 0 0 -0.0669639086783979 0.735385858644619 0.0362669928715327 0.53595399153193 GACTCATTGGAAAAGACCCTGATGTTGGGAAAGTTTGAAGGCAGAAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGCATCACCCACTCAATGGAGATAAGAATTTGAGTAATCTCCGGGAGTTGGGATGGACAGGGAGGCCTGGTGTGCTGTGGTCTACAGTGTTGCGAAGAGTTGGACATGACTGAGCGACTCAACTGAATTCCTGAACAGCCTTGGTGTGTTATTGATGGTTTCAGATGTATATAATTTGAGGGTATGTGGTGACTGTTTCAATCAAAACTGTCAGCAAAAAATATACTCACAACAGACTATTAACCAACTAGAAAGTAACATATACCTTCTGTCATCTTGCTGTTTACTTAAGTATCACGTGTGAGGTACAATCACAAGTCAGTACTTATCCCAGAAAGGAGAGAGTACTTAATTGTAAACAAAATGGAGTCTTACATTTATGTAAACCATTTTGTGGTTTAACTTTTACTTCTAGAACAGAAATGCACCCTAGGGAAAAACACAAAATAATGCTCTTTGCTTTTATATGAATTAAAATCCAGAGTTTGTGTTTGAAAACAGTAATAAGCATTAAACAGCACTTCTGTGTTGTTGTATATGCACATTTGCTTTAAAGCAGACTGTACAAACATAAGAAACTGTTTTATCAAATTTAAAATTACTTTTTGTTAACAACACGCTGCTTTGCCCATGGAAACCTTTCTACGTAGTTTAAGGCTATATAATCTTACTGCTAATCAATCATAAACCACACCCATCATTCCCTCCAAAATTATAAGCTAAATTTATAAACAAAATTCACTGTAACTTTGCATTCAAATATTTAAGCAAATGAGTCAAATTAAGTCTCTGTACACAAAAATTTACATGACACAGAGGAGATAAACTTTCTAAGTTATGACAGTTACCTAAAACTTATCTTTGGAATGGGTCATATGCAACAAAATGAAAGATGCTTTGTTTCTCAATGTGTATCAATGAATTCATTTTCAAACCCTGAGAATATATTACCAATTCAAAAAATACGATCATAACTAATATGCTTAATATGCAGTTATATTACTTAGAGTTTTGCCCACTCTTAGCAAAGAACTTGATTTAATGCAACTGAAAAGAATGATTCTAATCACTTAAAACTGAAAGTTACAGATCTTTACCTTTTCATTATACAACTTAATGTAACCAATCCTATTATCAAAAAATTTTCTTTCCAAGTTCTAGAAGTCATTACTCTAGGATATTAAAATTAGTAATAACCCGAGGACAAACTACAGATTGCTAGACACATCTGATAAAGAATTGTTATCTAAGATACGAAAAGAACTCTTAAAATAGGAAAACAAACTACTGGGCCAAAGAGCTTATTAGACACCATGTTAAAGATAAACAGATTGCAAATTAATACTAAAGATTCAAGTTACCATAATGAGATTTAACTGCAC TCONS_00227580 TCONS_00227581 TCONS_00227582 TCONS_00227583 . 3' 1534 TCONS_00227580 TCONS_00227581 TCONS_00227582 TCONS_00227583 . 3' 2996 EMBV3_42917 GCGCGGCCAGGAGCGAGGATGCAGTGTCTGTGGTGACCCAGGATGTAAGAGGGCTGCTGA Variant GeneID:534910|CD200:NM_001034620:98_cdna 114^195 2 EMBV3_03236 GeneID:534910 1 GENE CD200 MGC128080 CD200 molecule EMBV3_04273 AGGAGCTGCCCATTTGCTTGTAATTAGCCTGAGCTGCATGTGCAATTTATTCACGGTGGG Gene BVV0102_172594 + 0 NULL GK000017.2:29999023-30095168 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076900 TCONS_00076899 TCONS_00076898 1 XLOC_046937 Coding TCONS_00076900 XLOC_046937 Coding Coding LOC515517 17:30040813-30074745 j TSS57620 1880 1 TCONS_00076900_1 141 9 0.944858683799475 1.56786121519329e-101 0.000205769108783028 1.68652477048459e-14 8.95223410946482e-07 0.000340753520367331 1.63340040822035e-96 0.000279470087015355 4.81352387460104e-05 0.00131394029696056 0.00601129617040446 0.00130803354533646 7.30214239911482e-05 7.07582036648262e-05 0.000594067242005309 0.000371977390921585 0.00295695263360411 5.46348591606288e-30 0.000149987954616039 0.000800316069421399 1.70198338939373e-48 1.55073107582975e-23 5.46719929890291e-24 8.74841885828662e-05 0.000981925371535787 0.00013110538381652 2.07522672016467e-07 2.9737973222444e-09 0.000777544799786796 2.53178494833026e-20 0.00102546576339723 XM_003583293.2 LOC515517 PREDICTED: Bos taurus la-related protein 1B-like (LOC515517), mRNA. 0.0 1362 98.97 0.407446808510638 XM_005263101.1 LARP1B PREDICTED: Homo sapiens La ribonucleoprotein domain family, member 1B (LARP1B), transcript variant X16, mRNA. 0.0 1792 82.61 0.904787234042553 TCONS_00076900_1 sp|Q659C4|LAR1B_HUMAN LAR1B_HUMAN La-related protein 1B; 2e-76 247 95.56 0.950354609929078 1 coding GGCACCCAGGCGGGCTCGTCAGTCACCCACCGCGGGCGGCGGCCTGGCGAGGTCTGGAGCCGAGCTCAGTTCCCCTCAAATTATAAAAGCAGGAAAACTCAAGACAAAGAAATCCAATAAGGCTAGTGATTTCAGTGATATGGCAAATTGGCCAACACCAAGTGAATTAGTGAACACTGAACTAATAAGCACAGATGGGTACCACTCCACTTAGAAGATGTAAGACCAGAGAGTCAAGAAAGACCAGGGTCCCGGAATAGCTCAAGATGTCAACCTGAAGCAAATAAATCATCACATAACAATAGGAGAAATGACACACGAAGTTGGAGGCGTGAAAGAGAAAAGAGAGATGATCAAGATGAAGTTTCCAGTGTGAGAAGTGAGGGTGGTAATATCCGAGGCTCCTTTAGAGGCCGAGGACGAGGCCGAGGACGAGGAAGAGGCCGGGGCAGAGGAAATCCTCGTTTGATTATTCATATGGTTATCAAGAACATGATGAAAGCACTGATCAAGCATTTCAAACAGAGCTTAATGCCAGTATGATGTATTACTATGACGATGGTACAGGCGTTCAGGTGTATCCTGTGGAAGAAGCATTGCTCAAAGAGTATATTAAGCGCCAAATTGAGTATTACTTCAGTATAGAAAATTTGGAACGGGATTTCTTTCTTAGGAGAAAGATGGACGAGCAAGGTTTCTTGCCTATTTCCCTGATTGCTGGTTTCCACCGTGTTCAGGCTCTCACTACAAACCTTAATCTCATTTTGGAGGCACTGAAAGATAGCACAGAAGTGGAAATTGTGGATGAGAAAATGAGAAAAAAGATAGAACCAGAAAAATGGCCGATTCCAGGCCCTGTTCCACGGAGTGTGCCACAAACAGACTTCTCTCAACTGATTGATTGCCCAGAATTTGTACCAGGGCAAGCGTTTGGTTCACATACAGTCAGGGTGATGATCTACTGATGCTCTTGGATGTCATTTCATCGGAATATGCAGAGGAATAGGTGACTCAATGAAATATCATTATAAATATTGGAACAAATCGTGCTGCAGAAATGAAAGCGACCAGACTTCTCTCCAAGACTTTCTACTTCCACTCCTTGTGGAGGAGATTGGGCCAACACTACAATGGAGATAACACCTTTGTGATGATGATGACAGACCCGAGAACTGCTGTTGTTTTTAATAGGAGCTGCCCATTTGCTTGTAATTAGCCTGAGCTGCATGTGCAGTTTATTCACGGTGGGAAAGTTAATTATCATTCTGGAAATATTGCAAGATTCTGTCTTTTCCTTCCAGACTTCTGTACTTGTGTCCAGATCAATAAAGCAGAAATAGGCTTGAGTGGAATTTCCCAGTTTGTTAAATCCTTTGCTGTTTTCAGTATAGTGTACATTGTGTAACTCACCTATTGTCATAATATTTCACACGGACTATGAGATTTATTAATGTGGACTGTTAAGGATAAGAAACCTTAAGAAATGAACAAGTGTATTTTTTTTTTCTCTTTGAAATCTATTTTTGATATACCATTATAGAGACCTGCCATCAATAAAGCACTGATGGACAGTCTCACAGATATTTTTATTGAGCATTTCTTTGATTGTTAGCCCTCTGTGCCTCTCTGCCTAGAAAGCAATTTGGGCAGGTGTTTTAAAAGTTTGAGAACTTCAAGTGACAGTTTTTTAGGTTTTTAAAAAAAATATGATGTCTGATTGTATAAGTTAGATTAATTTATTGTATAAACCTGGGGTCCAAGATGATATATTTAACCTTATGAACAGGCATTAGGTCAGTTGTAAAACAGAAACAGGGTAGGTAAGATAGTCAAGTTGGTGATGCCTGTCAATTAATCATTTATGCATTGTTAATAAAATT EMBV3_18645 ACAATTTCTTATGGAGACATTTCCAGCCTCAAGTGAGAAGAAGCCTGAAGGGCTGCCTCC Gene GeneID:528952|LOC528952:XM_002688925:103_cdna Constitutive 0 NULL GeneID:528952 7 GENE LOC528952 NULL similar to chromosome 19 open reading frame 29 EMBV3_16355 TTTGCCCTCATGTGCTGCCTCCTCTTCCTCCCAACCATCCTGGAGAACAATGGACTTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27514 GGGACAGATGGCTGCGTTCGTGTCTGGAAGGTTTGGGCAGGTTCCAGACCAGCCTGCCGG Variant GeneID:525256|PREB:NM_001076875:147_cdna 777^982 1 EMBV3_29265 GeneID:525256 11 GENE PREB MGC142362 prolactin regulatory element binding EMBV3_28266 GCCATGGACTGGGATGTAGAAAACTCCATTTGGACAGGGTGGGAACAATCAAAACGGAAG Gene GeneID:512009|GAB3:XM_002699702:37_cdna Constitutive 0 NULL GeneID:512009 X GENE GAB3 NULL GRB2-associated binding protein 3 EMBV3_28048 TAAAGACTGTAGAAGGGGTAGCCTAACGGCCAGTGAATAGAGCCCTCTCTGTTTTCCCCC Gene BVT0101_077582 + 0 NULL GK000014.2:65348432-65584520 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22833 AGCGCATAACCTGGGAAAGTGGTAGAAGCCCCTGGATAAGATGCTCATTCTTGACAGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18936 TACCCTGGTACATCTCCGTCATCCATGAGAAGGTCAGGTTCCTATCTGTCTTCTTCCCCA Gene GeneID:531681|CCDC27:NM_001102139:166_cdna Constitutive 0 NULL GeneID:531681 16 GENE CCDC27 MGC152366 coiled-coil domain containing 27 EMBV3_23424 TGACACAGCAGGGGAAGAAGAGTGAGGTGAATGGAGAAAGCAGCATCAACATGTAGCACC Gene GeneID:616597|RAD9B:NM_001035479:273_cdna UTR3_Alt 2 NULL GeneID:616597 17 GENE RAD9B NULL RAD9 homolog B (S. pombe) EMBV3_20430 AGAGCACTGTCTTCACCCTACCCCAATTCCACATGCCCAAGGTAAACTGTTAATAATCTG Gene GeneID:515091|IFIT5:NM_001075698:31_cdna UTR3_Alt 1 NULL GeneID:515091 26 GENE IFIT5 MGC137763 interferon-induced protein with tetratricopeptide repeats 5 EMBV3_28859 CTGGAATTTTTCCTTTTGCCCTCTGTTAGGTGACTCGCTGGGTTCCAGACCACATGGCAT Gene GeneID:782743|MTMR4:NM_001102328:75_cdna UTR3_Alt 2 NULL GeneID:782743 19 GENE MTMR4 MGC139322 myotubularin related protein 4 EMBV3_38711 CCCGGGCAGCTCCCACTACGGACACCCCAGCATCCGGAGGGGTTTCCAGGTGTACAAGCA Variant GeneID:512500|CYC1:NM_001038090:68_cdna 171^367 1 EMBV3_25286 GeneID:512500 14 GENE CYC1 MGC134266 cytochrome c-1 EMBV3_10232 TTTGGCAGCACAACCACAGATAATCACAACCCTATGGCTGTGGTGGCAACTGCAGAGAGG Variant GeneID:513080|RAE1:NM_001015585:1018_cdna 270^728 2 EMBV3_16953 GeneID:513080 13 GENE RAE1 MGC134058 RAE1 RNA export 1 homolog (S. pombe) EMBV3_28363 GGCCCTACGACTGGCCCAACTTATCCTGCTGACCTTCATCTTCTGCTGGACACCTTATTA Gene GeneID:789231|LOC789231:XR_083625:37_cdna Constitutive 0 NULL GeneID:789231 3 PSEUDO LOC789231 NULL similar to GnRH receptor II EMBV3_28037 AAGACGTCCTCCCCCCTTATTTCTGTTCTCAGTTGGAGATGCAGCAGCTTACTCCTGTAG Gene BVT0102_344118 + 1 EMBV3_41641 GK000008.2:20028570-20315339 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224585 TCONS_00224588 TCONS_00224590 TCONS_00224591 TCONS_00224589 TCONS_00224587 TCONS_00224586 1 XLOC_137561 Coding TCONS_00224590 XLOC_137561 Coding Coding LOC100296271 8:20313518-20437897 j TSS168368 1018 1 TCONS_00224590_1 146 0.0265225933202358 4 0.991847432825741 0.0301158908280145 0.0245986094260749 0.0239822312238004 0.016616741706712 0.0232783344587763 0.00804985537254662 0.0151417204004582 0.0174018154106768 0.0247707881188282 0.00270361948253808 0.00074910165104923 0.00092710169571267 0.0039127127136693 0.00536201753947423 0.00819078971826656 5.3461010432245e-05 0 0 0.0204245123421369 0.0221782521073318 0.00975700078169487 7.10235628493556e-98 0.000868532799583733 4.40113617967239e-05 0.0246143209714182 0.0204636574203521 0.0140713104710391 0.000401621485947571 0.000990603663680298 0.00018778930017007 XM_003582512.2 LOC100851964 PREDICTED: Bos taurus uncharacterized LOC100851964 (LOC100851964), 2e-180 636 100.00 0.344793713163065 XM_005251394.1 ELAVL2 PREDICTED: Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (ELAVL2), transcript variant X5, 0.0 1510 97.87 0.87426326129666 TCONS_00224590_1 sp|Q12926|ELAV2_HUMAN ELAV2_HUMAN ELAV-like protein 2; 2e-73 228 100.00 0.753424657534247 3 coding ATACTTCCGCGCGTGCTGCTTGGGATAGGAGCCTGGCAGAGCAGCTGCACACACGGCAGTGCGGAGGCAGAGAAGGGGTTGGTGATACCGTGCTATAAATCTGTGGTCCAGTCCACCTCCCTTTTAAGACGTCCTCCCCCCTTATTTCTGTTCTCAGTTAGAGATGCAGCAGCTTACTCCTGTAGCGACCTACTAAAAAGCAACAAGGAGAAAGACATCGTCTTTTTGAAAAAACGTTCTTTCGTCTCTTTCTTTGTTCCTTCGTTTGTTTTTCTTGCCCCTTTTTGTTTAGTTGAAAGGCAATAGGAGGGTAGTCTCTCCGTCTTTTTAAACTCTCTTTTTTAAGTTTCCCCTCCCCTTTCATATTTTTTTTTCGCCATTTCTTTTAGCGTTGGACTTTGGGGTCGAAAGCATTTCTTTTTATTTGCTTCTTTTAAGCCGAGCACAGTTTAGGTTTCGTGCTGTCTTAAGAGAACTATCCAGCAGCTTCTTGCTCATCCTTATTGGGAGAACTGCACCGTTACTTTAAAAACACACATACACAAAAACCTTAAGGGAGAAAGCAGGTAATTGCTGCCATGGAAACACAACTGTCTAATGGGCCAACTTGCAATAACACAGCCAACGGTCCAACCACCATAAACAACAACTGCTCGTCACCAGTTGACTCCGGGAACACAGAGGACAGCAAGACCAACTTAATAGTCAACTACCTTCCTCAGAACATGACACAGGAGGAACTAAAGAGTCTTTTTGGGAGCATCGGTGAGATAGAGTCCTGTAAGCTTGTAAGAGACAAAATAACAGGGCAGAGCTTGGGATATGGCTTTGTGAACTACATTGACCCTAAGGATGCAGAGAAAGCTATCAACACCCTGAATGGATTGAGACTTCAAACCAAAACAATAAAAGACAAGTGCACTGATAAACTGGTTACTATTATGTGGTATTATGGCAAGAAAACTGGACAAGGAGACAAGGACAAGGGTTTCAGTTCAGTCCAGTCGCTCAGTCATGT EMBV3_16323 TCGACCGGTGAGAGGTGTTGAACGACGACACATATTCTTCAGGGCCATCCCTCTGACTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31953 TGGCTTGCCTGAGGATGGCACCGTAGCCTCTGGTTATGTCACCACCCCAGATCTGATATT Gene GeneID:528530|CSF2RB:XM_002687687:58_cdna Constitutive 0 NULL GeneID:528530 5 GENE CSF2RB NULL colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) EMBV3_21604 GACCGGTTCAGTAAAGAGAATGGTTTCACAGGTTGGACAGAAACCTCGGTCAAGGAGAAC Gene GeneID:539000|RAB7L1:NM_001099094:91_cdna UTR3_Alt 4 NULL GeneID:539000 16 GENE RAB7L1 MGC148495 RAB7, member RAS oncogene family-like 1 EMBV3_35364 ACATGTTTCATTCCCAGTGTCTTTGTTGGGGAGGGAACTTTTTTAGATGACTATTCATTG Gene GeneID:507820|SENP7:NM_001101888:8_cdna UTR3_Alt 2 NULL GeneID:507820 1 GENE SENP7 MGC152178 SUMO1/sentrin specific peptidase 7 EMBV3_37174 GCAGAGTCAGCTACTGAGAGCTCTGGAAAGAAGGATGTCAAGAAGGTGAAATCCTAAAGC Gene GeneID:535439|SMARCA1:XM_002699514:26_cdna Constitutive 0 NULL GeneID:535439 X GENE SMARCA1 NULL SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 EMBV3_41974 AGGCCACATGCCAATGATGCCCGGGCCCCCAATGATGAGACCTCCTGCCCGTCCCATGAT Gene GeneID:614553|SNRPC:NM_001076334:158_cdna Constitutive 3 NULL GeneID:614553 23 GENE SNRPC MGC134384 small nuclear ribonucleoprotein polypeptide C EMBV3_39161 ACTGCCAGGTGGAACGCTGCAGGCGGCTAGACGGAAAGAATTTACTTTCAGGTTTTCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30628 CAGTGTGTGAAGTGTGTTGTGGAAGAGGCTTATAAGTAAGGGGGAATATTTTATCAGACC Gene GeneID:539404|IREB2:XM_002696666:286_cdna Constitutive 2 NULL GeneID:539404 21 GENE IREB2 NULL iron-responsive element binding protein 2 EMBV3_22764 TTTAGTAGCTCACAAGGACATTGCTAACTGGCTTTCTGTGAAACTTTAGAAGAGACAAAC Variant GeneID:507462|SNX16:XM_002692833:192_cdna 525^594 3 EMBV3_16190 GeneID:507462 14 GENE SNX16 NULL sorting nexin 16 EMBV3_08773 GGGAAGAAGGCACCACTCAGGGACCATCTAGAGCAAAGGCTACAGTAAGAGCATCTGTGA Gene BVV0102_101170 + 0 NULL GK000020.2:4762879-4818455 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13171 AGAGAAGGACATCACGACCCACATCAAGAAGGAGTCTGACAAGAAGTACAACCCCGTCTG Gene GeneID:100336193|LOC100336193:XM_002683975:5_cdna Constitutive 0 NULL GeneID:100336193 Un GENE LOC100336193 NULL dynein light chain 1-like EMBV3_38149 GCTACCAAGATGTACCACAGAACATGATAGCCCACTGAGGATGAGGCAGGATACCTGGAG Gene GeneID:530095|DGKI:XM_002687061:190_cdna Constitutive 0 NULL GeneID:530095 4 GENE DGKI NULL diacylglycerol kinase, iota EMBV3_33722 AGAAGGGAAAAGAAGGACAAGTCTTCATCTAGGAAAAGTTCCCGTCACCGCAGGACAGGG Gene GeneID:540409|LOC540409:XM_002689339:34_cdna Constitutive 0 NULL GeneID:540409 7 GENE LOC540409 NULL hypothetical LOC540409 EMBV3_30008 AGGTTGCTTCATTGTTAGGTGCCCGGGGTGAAGACTGACGTCCTTGGGCTCTATATCTCT Gene BVT0102_292122 - 1 EMBV3_37745 GK000002.2:136351001-136362235 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113008 1 XLOC_068903 NonCoding TCONS_00113008 XLOC_068903 NonCoding NonCoding - 2:136361221-136362077 - TSS84629 856 1 TCONS_00113008_1 80 0.240654205607477 1 0 0 0 0 0.00010671214805358 0.00222058293655914 1.25364215747642e-05 0 0 0.000534612780309081 0 0 0 0 0 0 0.00018512788127804 0 5.86237963417963e-05 5.02636275175795e-05 0.000873724715736254 9.22064093339243e-05 0 1.07173569320563e-05 0 3.23760629117613e-05 0 0.00011636157459906 0 0 0 XM_005200916.1 LOC101905263 PREDICTED: Bos taurus zinc finger protein 431-like (LOC101905263), 4e-11 73.4 84.06 0.0771028037383178 0 noncoding GAGCGATTGAATTGGTGTCCCCTGCATTGCAAGGCAGATTTCTAACGACTGGACCACCAGAAAGCTCCCTCCGTGAGTGTTTAACCAGGGGTCTTTGCATTATTCAAGTGTGTAGCACAGATAGTGCTTTTCAGAGTGAGCTTGACCCAGATCTGTTCAATAGCGTCTTGCCTTCCCAACTTGAGAGCAGACTTGGTTCTGACCCAGCCCCATGTCCTATGAGGTGTCCCAGAATGCCCACTTTATCCCAGGGTGGTGGGCTGGCAGTTCAAGGTTGCTTCATTGTTAGGTGCCTGGGGTGAAGACTGACGTCCTTGGGCTCTATATCTCTGGCACCCCCTTCGATCACATGCTGTACAGATACTTCAGGAAGGTTGGCATTCACACACCAGATTGCTCCCTTGGAAGGGGGACTTTGCTGGAACCCATCCCATCGCAATAATGATGATGGAAAGAACAAAGAGCTTGGGAACCAGTTACGCCTAAATTCAAATCCTACCTCCGCACCCCAACTACCCTGCAATGTGGCTTTGGGAAAATGATACATCCTGTGCCTCAGTTTCCGCACCTGAAAAATGGAGTCAGTAACCAGTCACACAGTGGTGGTTACAGTTACGGGAGGCTTAGTTGCATAACCAAGGCACTGAGTTTCTCTCCATCAGTTGGCATCAAGAGCACTTGTGCTCATCGGACCCTGAGAAGTACAAGTGAATTAACTGACATCTATTACAGTCTCAAGCCGTTGGTAAACCTGCTTGATTGTCCCAAGGAGTGCGGGTGAGAGCGGTTCTGAGGCCGTCCTTCCCTCCAGCCTGGCTCCACAGGCGGCGTTCCGACCTTGGAGAACCTGCCGGGG TCONS_00104258 . 5' 145 TCONS_00104258 . 5' 145 EMBV3_15915 CCCTCCCTACCCACCCAACACCAGGATTTACATAGGGCTCCTGCGGGGCCACCGCGTCCT Gene BVV0102_312416 + 0 NULL GK000019.2:38549363-38561272 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29852 GTTCAGCCTGTTGCCCATCCTGACCTCGAATGTGAGAGAACCTTTGGCAGTTCTGGACAT Gene BVV0102_101169 + 0 NULL GK000019.2:28157772-28158377 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096179 TCONS_00096180 TCONS_00096181 1 XLOC_057901 Coding TCONS_00096181 XLOC_057901 NonCoding Coding LSMD1 19:28157868-28179476 j TSS71525 960 1 TCONS_00096181_2 237 3 0.955708798074698 0.00169967896016228 0.000730012119770772 0.00165100524097825 4.10272855426829e-05 0.000204800287786882 8.38862308954228e-05 0.000795048510155886 0.000149349651045125 5.87636185180322e-10 3.23250653004606e-05 3.44876022111458e-05 0.000243016470951746 0.000105501700083301 0.00117593326635995 0.000590479267249158 0.00638358590412407 0.00362506992747295 0.00263668971764763 0.00658474103201654 0.0062540191830895 0.00103894089730535 0.00261752361993169 0.00207588023040466 0.00502341824051995 0.0016065089011457 2.61975559890808e-09 9.56394869803043e-09 0.00301812194852586 0.00163674620277594 3.19911468020091e-09 XM_003583568.2 LSMD1 PREDICTED: Bos taurus LSM domain containing 1 (LSMD1), mRNA. 0.0 637 100.00 0.366666666666667 NM_032356.3 LSMD1 Homo sapiens LSM domain containing 1 (LSMD1), mRNA. 2e-117 426 88.13 0.35 0 noncoding 0 0 0 0 -5.45489482019725 0.0208592154975072 0.0225063234405424 0.680351538982361 TATATTTCCCTTCCTCCATGATCTCCAACACTGATAAAGTGGAAGAAACTGAGGTACCAAGAAACAGAAAAGTAACTGGGACTGAAAAAAAAGAAAGAGGACTCTGACGGGGAGCGCGAGGAGGACTCGCCGGCTGCGCGCGCTAGGCAGCAGCTGGAGGCGCTGCTCAACAAGACTATGCGCATTCGCATGACAGATGGACGGACCCTGGTCGGTTGCTTCCTCTGCACCGACCGTGACTGCAACGTTATCCTGGGCTCGGCGCAGGAGTTCCTCAAGCCGTCGGATTCCTTCTCTGCCGGGGAACCCCGTGTCTTGGGTCTGGCCATGGTACCTGGACACCACATCGTTTCTATTGAGGTGCAAAGAGAGAGCCTGGCGGGGCCTCCCTATCTCTGAGCCCTGTCGAACATGCCTTTCAGTCCTCATTAAACCTGTAACTGACCGTAACCTGTGTGTGTGTGTAGCTGGGATGCTGGGGCAGGGATTGCACATCCCATTCCTAGAGCAAGCTTATATGAGGTCGGGAGCACTCAGCCCTCCTTCCACAACCTGGATGTCCAGAACTGCCAAAGGTTCTCTCACATTCGAGGTCAGGATGGGCAACAGGCTGAACCTCAGATCCACAGGCCCTAGGATGGGCCCCTCTGTCTTCCCTCCCACGCAGCTGCTCCAGAATTGTGGCAGGAGGCGGGGTGTCATCCTGCTCCGGAAGGCCCATTGTTTCCCTCTCCGGCCTGGCAACACCGAGTTCCTCTTAAGCTGGGGTCAGAGAAAAGACTTGGGTCCCCAAGGGGAGCAGGGCAGGCGACAGAGGCCGGGCCCCCTTCACTCCATTGGTGAGAAGGTGCCTTTGGGGTCAGGGACAGAGCTCTGGGGTCTGGCCAGGAAGAGCGGGCTAATGCGATAAGGGAAGGCCAGGAGACTCAAGGATGCTTGGGCCTGCGAACTAAAGCTACC EMBV3_04431 GCCCTCCGCCTGGTCAAACCTGGAAATCAGGTATGCTGTCACACCAGTTGAAGCAGCATG Variant GeneID:540272|PA2G4:NM_001034699:31_cdna 648^711 1 EMBV3_16688 GeneID:540272 5 GENE PA2G4 MGC128827 proliferation-associated 2G4, 38kDa EMBV3_29489 GAAGATTAATATCTCACGGAGATTGACAGGAATGGGCAGGGGTGGGGGTGTTACATCAGG Gene GeneID:513072|MMP17:XM_002694456:62_cdna Constitutive 0 NULL GeneID:513072 17 GENE MMP17 NULL matrix metallopeptidase 17 (membrane-inserted) EMBV3_22918 CAGAACCAATGCTTCATATAGCCATACTCAGACATCTTCTAAATTATAATCCAGGGCTTT Gene BVT0102_043958 - 1 EMBV3_04432 GK000006.2:4743137-5339567 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202334 TCONS_00202335 TCONS_00202343 TCONS_00202350 TCONS_00202337 TCONS_00202342 TCONS_00202353 TCONS_00202340 TCONS_00202345 TCONS_00202351 TCONS_00202352 TCONS_00202348 TCONS_00202341 TCONS_00202338 TCONS_00202347 TCONS_00202339 TCONS_00202336 TCONS_00202349 TCONS_00202346 TCONS_00204336 TCONS_00202333 TCONS_00202354 2 XLOC_123950 XLOC_124412 Coding TCONS_00204336 XLOC_124412 NonCoding NonCoding - 6:4743337-4748476 - TSS152885 2186 3 TCONS_00204336_1 52 2 0.574931880108992 0.000555775991462019 0.00101501893785253 0.00060258022963956 0.000148030625872284 9.20392783867127e-05 5.81934536240384e-197 4.16495304310019e-13 7.97519413175317e-05 0.000656520136262721 5.19486034186127e-05 1.0166104170797e-44 1.79187675716147e-90 7.21908502343111e-67 0.000304902522241131 2.19693775409859e-45 0.00041032022736981 0 0.000164098731926144 0.000352137515665615 0.000357656951164665 2.32751755365126e-07 0 2.51797388776199e-05 7.1702853368949e-05 8.67295165301083e-05 0.0004088349037323 0.000585195424009454 1.7575467116883e-05 9.82157814523581e-14 2.75006733997706e-06 XM_005207569.1 PRDM5 PREDICTED: Bos taurus PR domain containing 5 (PRDM5), transcript 0.0 3837 100.00 0.972552607502287 XM_005262706.1 PRDM5 PREDICTED: Homo sapiens PR domain containing 5 (PRDM5), transcript 0.0 1153 72.33 0.938700823421775 0 noncoding 0 0 1 0 -1.02153560431891 0.0282128590239699 -0.0132411475467264 0.843672896185314 AGAGCACAAGGAGTGGATTCCACATGCAAGGAGTCGGAGAGGCTGAAGCGATGCCGAATGTCTTGACCTCAGGGTAAGAGTTTGACCTCTTCCCACAAACGTATGGGAGCTGTAACCTTCTGCAGCCTAAGAGGAAGATTCTTTAAAGTGAGTACCTGCACTCCAGCATGCCTGATCTTTTCCTCTATGACTGTCTTATTTCTGTTCTTAATTTCTCAATCAAACGAAATGAATTCTTATCTCTTTGTTATTGCTAAGTGATTTTAAAGTTCTAAGACACAAACTCTAAGATATCTGAAATGTTTTATAAATAATCGTCTTTCAGATAAAAGGTGATAGCACGGAAATGATTTTTTAAGGGTCTGTTTTGGTTTCAGTGCTTTGAAAATAAAGGATGGTGTACCAGCAGGTCTCTGAACGCCATTTTCTGAAGTCTTTTTTGACTGCAAACCTTGGGCCAGATCACATCCAGCACTTCAATCGTCATCAGTCCTCTCCACAGCATGTTGATAACATGCTTTCCAGGGTAACTTCCTCAGCAGCCCTGTAAATTGTGAGTCATCGAGATGATACACAGTTGGTCTGGCTTCAAGTTTCACACAATTGGCTATGAAGCATCCCATACAGAGAAGGCAGCACCCAAAGGAATGAGCAGAACATGTTTAAATAATACCATCTACTAAATTTTACAGCTGTCCTTTTATATTCAAATGAGATTAAGCACACTGTTATGTTAAAATGAAAACACTTTAGATCTAAAAATATACGACTGAAACAAATGACATAGCAAGAAACAAGACCAAAATCTATTTGTATAAAATATAGTCTATAATTTCAGAACCAATGCTTCATATAGCCATACTCAGACATCTTCTAAATTATAATCCAGGGCTTTATATTTTTAAAAATTATCTCTGGTGAATTTCAAATTTAGTATTTTTCACAGAGTTTAAATATCTATAATGAATCGTTGCTTCTTTTTAGAACTGGAACTGAGCATAAATATAATTCTAAAACAAGATTCCTGATTTCAGAGAATTTTGTCTTCAGATAACCTTTCTCCACAAATGATTAGAATTAAATAACTTCCTTAAAATTATACTTTCTCTCTTTTGAATGGGTTCCAAATAGAAAAGTTCTTGAATTGGGATTCATTTTAAGTTTTTGCTGGTTGGGATTTTTCTACGCTACTTTAACAACATTATTACATTTTATCATATCTTCTCCCAAGACAAGCTGTTCATTGTACGTTGTTTTCAAGTCCTGAACCGAAATATAACCTAAAGGAAGAAATTATGCTTCTTGCTTCAATTTCCCTTAAACATTGGCGATCATTTCGTCATAACAACTGCCAGGGTTGTGTTTTTTATTCTGGATTCCTAATTATAAAGGATTAAGAGTAATTCAAAAGTGTTTCAGAATCACCTACTGCCAAGATTCTGGAAAATGTCTCTTGAGAAACAGGATGTAGATGCTTTGAGGACTGCTGCATCTGCACGGACAGGCCCTGTGCTCCCCGATGCAACGAGAGGGTGAAGGGCCAGGTCAGCACCCTGATGCACCTGCCGTCCTGCTGCTCCGTCAGTCAGCAGATACTGAGAGCCCATTTGGTTTCCACGGTTAGTCATCTGTTGTTAATTTCTAAAGGTAGCTAGTAGAAACTCAGGAGAATCACCTGGACAAATTTAAGTGTTATGGCCACTTCTGTGTTGATATAAGTATTCTAGCCATGCATGCTGGCAACTGAATGATGAGGAGATGTTTCCTGAGGATTGTCTAAAATAAGGAAAATTTCAGTAGATGTTTTAGTTCTTAAACACCTTTTTAAACTCATCTGTTGTAAGGAGCTATGAAGGACCATCAACTTTTGGCCTGTTTCACAAACAGCGAGTTTTATACTGTTACTGCACTTGAGACTTGGGAAACTCTTGCCTCTCATCCTTATCTGTAATGATATCTTGGAAATCTTAATTCCTTTCCTGTTAAATTAGTAATAACCAATTGTGATAACTAGCACGTACACACACACACATAAGGATAAAAATAAAATTAAAAAGCCTGACAAAGAGTATGTTAATAAACCTCACTACAGAGAGATTGGCCAAGAAGAAGATGACATGGCTCCTTTTCCATTTTTATATGACATAACAAAAGTAGTATTTTGGAAGGTTATAAAGTTATTTTTT TCONS_00202354 r 5' 0 TCONS_00202354 r 5' 0 EMBV3_33872 AGGCTCTGGGGCTTGAACCAGTGATGTTGGAAGTCAAAGCAGAGCTATCTACCCAGCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39314 GTGGGCATGGCTCCCCTCTCTGTTGGCTCCCTGGACCCTTCCATCACACTGGGACAGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31032 CAGTGGTCAAGCTACAATCCTGGGTCCGCATGTGGTGCATCCGCCTTCGTTATTTACGTT Gene GeneID:768000|IQCF5:NM_001077060:331_cdna Constitutive 0 NULL GeneID:768000 22 GENE IQCF5 IQCF5L MGC133618 IQ motif containing F5 EMBV3_11129 GATCTCCAGGGCTTGTGAATTGTGGGCACAGCAAGATTGTGTTGGGGATTAACAGCAAAT Gene GeneID:100295656|LOC100295656:XR_083968:114_cdna Constitutive 0 NULL GeneID:100295656 19 PSEUDO LOC100295656 NULL hypothetical LOC100295656 EMBV3_05159 ACCTTCGTTTCCGCTGGTCTGGGGATGCTCCTTCAGAACTCCTGAGGAAATTCAGAAACT Gene GeneID:281259|DNAJC12:NM_174096:209_cdna Constitutive 0 NULL GeneID:281259 28 GENE DNAJC12 JDP1 DnaJ (Hsp40) homolog, subfamily C, member 12 EMBV3_41873 GAGCGACCTGCGCGGGGCCTGGGGAGTCATCCCCCTCCTGTGGAGCAGGCCACGCTGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31825 CTACACCGGCGAGCGGCTGCGATCACTCCAGCTTGTACCTCGCCACGGTGGCAGATGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37095 TGCTCACTGGCTTCTCTAAATCATGGCAGTTTCACGGACTGTCAGGAGGCCTGGCTGGAA Gene BVT0102_191358 - 1 EMBV3_37953 GK000004.2:8568525-8844553 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183118 TCONS_00183117 1 XLOC_111084 Coding TCONS_00183118 XLOC_111084 NonCoding Coding MTERF 4:8784110-9107705 j TSS136732 1204 2 TCONS_00183118_2 109 0.292358803986711 6 0.996297829996848 0.000230265874741106 0.000346240083390277 0.00015615575354174 1.70058583178012e-05 7.04836358044246e-05 5.77596437420196e-109 2.74872898565351e-05 0.000156633668599226 0.000140489132113906 0 6.22571199480646e-151 3.17264224867708e-265 3.07684664481515e-256 0 5.45345034919954e-05 6.89412470326167e-05 0 3.9116975350606e-206 8.76044546515082e-67 0.000160623714844846 6.10417797309832e-05 2.61255743333749e-05 0.000531320923497798 0 5.87401077017342e-05 0.000187823179071758 1.39030720426538e-112 5.67451105437884e-294 4.43500983459528e-06 9.54667675337059e-241 XM_600466.6 MTERF PREDICTED: Bos taurus mitochondrial transcription termination factor (MTERF), mRNA. 7e-23 113 100.00 0.0506644518272425 NM_022905.4 TTC23 Homo sapiens tetratricopeptide repeat domain 23 (TTC23), transcript 2e-24 118 74.23 0.1578073089701 0 noncoding 1 1 1 1 -0.0981913711669973 0.4865723168367 -0.014380677064225 0.767493266061546 ATGTCTGGGCTTCCCGTCAAACCAATTAAATCAGAATCCCTGGGGGTGGAGAGCTGGGCTTTGGAATACTTAAAAAGCTCCCGAGGGGATGCTAATGTGCAGCTAGCATTGACAACAGCAGGTTATGAGGGATACAGAGGTGAAAAGCTCAAGAGTCCAGCTCACAGTTATTTCTGTCCACTTACGTCCCTCTGTTTCTCGCGAGACTGCAGAGGTGCCAGGAAAGGCTTTTCCCCGTGCCCTGTTTTATTCCAGGTTGAGGGACAACTGTTTTCCCGCTTTTCTGGAGGAACGCAAAGTCCTTTTTCCTTAAGACAGATGAGATGTTGAAGCCCTAATCGTCAATGCGATGGCATTTGGAGATGGAGCTTTGGTATGTAATTAAGTCATGAGAGTGGAAATCTCCTGAGTGGGATTAATGCTTCATACGAAGAGACAAAAGGGAAATGATCTCTCTCTGCCACATGAGGATTCAGAAGAAGGCAGCCATCTGCAATCCTGGAAGAGGGATCTCACTCAATACCTTGATCTTGGACCTTTCAGTCTCCAGAAGTGTGATAAGCCATCTTTCTGCTGGGTGACTGGTTCTGAGCAAGGCTACCGGTGGGAGACAACATCTGAAGCATATCCAGACTATGCTATGTTACTACAGGAACTATAGCCTCACCTTTGAAAGACTGAGGGTTAGTCCAATCATGGTGACCCATCCTGTTTCCCAGGTGATTGATTCAGGTGGTTTAAAAGCCACGTTCAGAAGCCTTCCCTCTTCCATGCACCACTGACAGCCAATGTTTCCAGTCTGACTCAGAGAGCCACCGTCTTTGTGGAGGTCGCCATGGCACGGGCTGGTCTTCACTGGCGTTCCCTCCTGCGCGAGCTCTGCCAAAGACGCATCCGCAGGGGTGAGCTAGAGGACACGCGAGGCGTTTAGAAGTCAGGGTTCCAGCCAGGCCTCCTGACAGTCCGTGAAACTGCCATGATTTAGAGAAGCCAGTGAGCAGCAGAAACTAAAAGCCCAGTTGACGTACATTGCTGCAGAGTTTTCTGTCAAACAATGTTGTTTTCTGACAACAACTTTGAAAAATAGACAGAAGGGCCACCCAAGAGGAATATGCATCAACGAGAAAAAGTCTATACCAGATAAGAAACGAGAGATAGTAAAAAAGGACTAAGGTATCTTTCGGAGTTAGGAGAATAAAACATT EMBV3_23726 TACTTCAGTTGTGGGTTTTTAATAAATTGAGATGAAAGTAAAACTCACCCTTCCCACCCC Gene BVT0102_059751 - 0 NULL GK000030.2:18085911-18120060 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246448 TCONS_00246447 1 XLOC_150980 NonCoding TCONS_00246448 XLOC_150980 NonCoding NonCoding LOC100847396 X:18095591-18099192 = TSS184757 3271 5 TCONS_00246448_3 48 2 0.0919444444444445 0.000474167338865553 0.000599034580840598 0.000471558097576069 0.000225945707349924 0.000369896126153018 5.0280329366173e-05 0.000546802599596668 0.000301974244415061 0.000922242379362386 0.00014904215199801 2.55409969141008e-05 0.000111500973270268 6.13689173093022e-05 0.000143806380498663 0.000434518161867089 0.000855323462898313 0.00016213324184516 0.000766933007503954 0.000346378629603746 0.000384705264231703 9.00282343631186e-05 0.000737302489714579 0.00112466131425581 0.000653215757416937 0.000516829187805687 0.000534170906633612 0.000576779680032061 0.000108018589766038 0.000193874062639305 0.000262989974188899 XR_139724.2 LOC100847396 PREDICTED: Bos taurus uncharacterized LOC100847396 (LOC100847396), 0.0 5898 100.00 0.99938856618771 NM_001015877.1 PHF6 Homo sapiens PHD finger protein 6 (PHF6), transcript variant 1, 0.0 4599 91.51 0.999694283093855 0 noncoding 0 0 0 0 -0.153781543144174 0.504709547192092 NA NA ACTATATTGTAAAAATCATAGTGGAAATGATGAGAGAGATGAAGAAGATGAAGAACGAGAGAGTAAAAGCCGAGGAAAAGTAGAAATTGATCAGCAACAACTAACTCAGCAGCAGCTTAATGGAAACTAGGTTCATGGGACAGAGTTAGAAAACTGGGAATGAATAAGACATCCATAACTACTATTCTTTTTTCACTGTTTTCTAAAATCAAAAAGGGTTTGTAACTTTTTACTGCCCAACTCTTAGATCCTTCATTGAACTGCCTAAAAGCATCTTGTTTGTTTTATGAGCCTTCACTAGATGGCAGAGTTTGACATGTTGATATTACGTAGCTGTAGTTTGCAGTTTCTGGGAAGCAATTGAAACACTATTAACCCTGTGTATAGTGTCAACAGTTAAAGCAGACATTGAAATGAAGTAAGCTATATTTCTGGACTGAACAAAGTTCTACTGTTTAGAATGTCTAAGTTTGTTTAGTGGATTCATACTCAAGGGAAAGCGTAAGCAAATTTCACTTTACAGTACAAACATGCCTCTGGTGGCAACACATGGGAATTTTTGAATTTTTTTTTCCACGCTCAAGTAACGGAGGCTAGAAATGAAGAGAACCTTCTTTTTCTCTTGGCTTTGACAGCACATGCTAAAAAATCTCTTCCAAGAAGTGTGCTAAAGCTTTTCATTTGGTTCCTGTTAAAGTTGTTTTCACTGACCAGCATGGACTCGGGCAACTGGTGATTATAAGCTTTGAGCTCCAGTGCTTATGCCAAAATTCTCTTGACAGTAAACCTCTTCTCTTTTCATGTCATACAAAGAGCTTCTAGCAAAATGATTGGATCCTTTCAAGTTTAAACTAACATTTGGCAACAGCAAATGAAACCTCTTTAAGATTTAAGGGGTTACCACTTACTAAGGACTTTAGCCACCATGTCTGAAACTTGTTCCTCTCAAGTGCCGTGTTTTTGTGGAACACTTCATATATTGGCCCAAAGTATGTAAGGAGGTCTCATGTGCTGTAGAAGTAAAAAAAAAAAAAACAGTCTTTGCATAAAACAGTATTTATTTTTAATTTTGTGACCACTATTTTAGAAACTTTATTTAATATTTTTAATGTTTTCATTCATTGCTTTGCTTATCTATAAAATAGGCTTCTGTGTCCTATTTTCCTTCTGGTAATGTTCGGTATTGTTTCATTGATCATCAGAATTGTTTCTCAAAGCCTAAGAACCCAGCTTTTTAGAAAGGATTTTCACACTGGCATTTCTAGCTAGTGATATTTTCTTCCATTTACCTGCTGAAGCACATTTATCTATTTCTTTGTGGCAAAACCAAAAAAACTTTAGTTGTGTTCTGCCTAATATTACCATAGCACCTCAGTATCAAGGGTAGGGATTCTGATTTCTGGTTTATTAACCTACCACATTAAAGCAGATTAGCCAACAAGAAATAACATGTTAACTTGACTGTACATTGAGATGTTCTGCAGATTATGGAAAAGCATTTTAAAAATGTAACAGGTGGAAAATTACACTGTGCTTAATGACTGATTTTTTTTAACTGCCAGTCCCTTAAAGTCACATTTGTCAAGTGTGTATTCACACATTTACTTAAATCAAGGGACTCAATGATTGCTTTATTTTAACCATCTTTTATTATTTTTAGAAGGAAACTAGCTTTAGTAGTGGATTGCCCTATACGTTGTTCTCCTTTTGCTCTAAATATACCATTGGATTTTTTTGTGTATGTATGTGATGAATTTTCAAAATTCACCATGACTTGAAGTGCAACGACAGATCTAGATGTTTGTTTACCAAGCTATGTGACTTTTCCCAAAGGATCTGTACTTTATTTCCTTACAGCAGCTTGAAACCCATTATTTTAAATCTTTGAATCACTGTGTCTAGATCATTTTTACATTGTGTGCCATAGACTTACCCACGGAATAATAGAGCACCTTCATTTTTGGACAACTACTGTAATGATATTTTTAGGAAAAATGGAAGGTGCCAAGGGGTAATAATGGCCAGTCAATAATCATATAATGAACTTCAAATACTATAGCTGTCAGTTAATAAATTTGTTATGTAATAAAGTGTATGACTTTGTATGGGTTTCTTCAACCCTTTCTCTGCCACTAGCAACCAGAATAGCACTTTACCATTTGGTTGGCTAGATAAGTGGCTGGCTACCTATTTTTCTCACTGTGGTGTCATTGGCTAAACAGTCTTTCATTAAAAATTGAAATGTAAATTGAAGTCACATGAAAAATCACCTTCGGTTGTAAACTTCCAATATTTTGATTCTCTATCCATGTTTTCGTCACATGCTGAGTAAAAGTGCCTTACAATGTAAAAATTGTACAGTACTTATGTTCCCAAGTAGCATCATCATCTTTTGGGTAGTAATTACATTGTGGTATGAATATTTAGAAAAATGGACCTCAGCAGTGTATTTACTGTTCATCTCTTAAGTCCTTAACTGTAGTTTTAATAAGCATGACATTATTTGATAAGTATATAACATTTACATCATTTCAAAAAATACTGCCATGACTGTCCTTTATGCATATTTTAGCTTAAAATTTTGAAGCATTTTTTCTTTTTTCCTTTTTTTTTGTTTTGTTTTTGTTATCGATATTAAACAGTGTAATCTTTGCAAGCATATATTGAAGATTATTCTGGAGCATTTATTGCCTTACCAGAAATGTTAGTAAGAAATGTTCTTTAGAGTAGAAAGATAGACTTGAGTTTCTATACTTTAATGAGCTCTTTGTTCCTGGGGGGAGGGGGGTGGGAAGGGTGAGTTTTACTTTCATCTCAATTTATTAAAAACCCACAACTGAAGTACATTTTATTTCAATGATCATCAGTTTTAGAATTTCAGATAGTACTTGCTCTGGAGTACATGTTACTCAAGATATTAAGAGAATAACAAGATATGTAGATCTACTGTTAAATCAGAATCTATGTACTTGAACAAATGTGTGAATCTTAAATATCTCAAAGCAAAAGAAAAGTGTTCTAGAATGTTGTTGCTTTTTTAAGAAGCACTAAAGTTAGACCAAGGTATACAGTTTTGTTCTAACAGACATTTAGGTTATTGTAAAGATAAGGAATGCATTATGGGTCAAAATCAAACATTCCTCTCATATTATGTATATTTTGTTCCTGTTATATTGGCTTTATTTTCAAAATTGTAGTTTGTAGTATTAGTTTCCTTTTATTGGTATTCTTGCATATACTATTCATTCAATAAATGAGTTATGACTTTCAT EMBV3_12021 CCACATGAACGCCACGGCCCAGGGCCACAGCCTGACCAAAGCTGGACTCTTTGACACAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41586 TGGGATGTTAGCAGCTCTCACTCTCGCAACGCCCTTTGACTCCATCTACTTCGGACTATG Gene GeneID:537150|SLC14A2:NM_001144102:158_cdna Constitutive 0 NULL GeneID:537150 24 GENE SLC14A2 NULL solute carrier family 14 (urea transporter), member 2 EMBV3_25427 CAACAGGCAGCAGTACCAAGTGGAGGGTTCAGACGCAGTGCCTGGGATGCAAAAGAAACT Gene GeneID:527790|WDFY4:XM_002698958:84_cdna Constitutive 0 NULL GeneID:527790 28 GENE WDFY4 NULL WDFY family member 4 EMBV3_40572 TTTGATGCCGTTGAGATTTACTTCCCACCAACTGACAAAGCAGGGAGTCTAAAGAAGTCA Gene GeneID:541175|DUSP10:NM_001034725:98_cdna Constitutive 3 NULL GeneID:541175 16 GENE DUSP10 NULL dual specificity phosphatase 10 EMBV3_14709 GAGAGCCGCACCAACGCCGACATCATCGAGTCAGCTGTCCCGGCCCCCAACTTTGCCATG Variant GeneID:100336730|LOC100336730:XM_002685968:271_cdna 584^721 1 EMBV3_37202 GeneID:100336730 3 GENE LOC100336730 NULL myocyte enhancer factor 2D-like EMBV3_42602 CAAGACAGAGTATAACAGTGTGGCTGAGAGAGCTGGTAAAGTGGAAGCTGAGGTTAAAAG Gene BVT0102_049252 + 0 NULL GK000001.2:107892252-107913816 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004786 TCONS_00004789 TCONS_00004791 TCONS_00004788 TCONS_00004787 TCONS_00004792 TCONS_00004793 TCONS_00004794 TCONS_00004790 1 XLOC_001104 Coding TCONS_00004794 XLOC_001104 Coding Coding SMC4 1:107895049-107928238 = TSS2374 4510 1 TCONS_00004794_4 1288 24 0.864830661684946 0.00661268445819206 0.00602871494282543 0.00388321260598596 0.00293109184308191 0.00313473032120247 0.00189941766798915 0.00297501986610897 0.00283450351890346 0.0045011106417336 0.00251415241983679 0.00121351360320597 0.00227603479343524 0.000447922975098577 0.00344984443993032 0.00294658798745712 0.0171054026290385 0.0130893008534177 0.0183805063603354 0.0033261988696724 0.00446844127192842 0.00166973928965581 0.00803320731503945 0.00628620523431188 0.00843481444160136 0.00500093196068505 0.00521534851845196 0.00471983484406585 0.00268183348768026 0.00206772736166124 0.00204530156745819 NM_001105326.2 SMC4 Bos taurus structural maintenance of chromosomes 4 (SMC4), mRNA. 0.0 8120 99.93 0.999778270509978 NM_001002800.1 SMC4 Homo sapiens structural maintenance of chromosomes 4 (SMC4), 0.0 5869 90.76 0.939024390243902 TCONS_00004794_4 sp|Q9NTJ3|SMC4_HUMAN SMC4_HUMAN Structural maintenance of chromosomes protein 4; 0.0 2375 93.25 0.999223602484472 3 coding 0 0 1 1 0.00152155679384441 0.991387403332279 -0.0168069313851864 0.717873487188455 GTTTGTATTTTAGGCGCCATTTTCGAGTGAAGGACCCGGAGCCGAAACACCGGTAGGAACCGGGGGGCCTATACAACCGTTTCCAGCCTCGGTCTGAGTGGACTATCCTGCAGCGACCATGCCCCGTAAAGGCACCCAGCCCTCCACTGCCCATCGCAGAGAGGAAGGGCCGCCGCGGTCCCCGGACGGCACCAGCAGCGACGCGGAGCCGGATCCGCCGCCCGGCCGCGCGAGGAGCCAGGCGCTGGCCACCGCAGAAACTCCAAGTGAGGAAATTGATAATAGAAGTTTAGAAGAGATTTTGAATAGCATCCCTCCTCCCCCACCTCCTGCAATGACCAATGAACCTGGAGCTCCTCGTCTTATGATAACTCATATTGTAAACCAGAACTTCAAATCTTACGCTGGGGAAAAAATTCTGGGACCTTTCCATAAGCGATTTTCCTGTATTATTGGGCCAAATGGCAGTGGCAAATCCAATGTTATTGATTCTATGCTTTTTGTGTTTGGCTATCGAGCACAAAAAATAAGATCTAAAAAACTCTCAGTTCTAATACACAATTCTGATGAACATAAGGATATTCAGAGTTGCACTGTAGCTGTTCATTTTCAAAAGATAATTGATAAGGAAGGGGATGATTATGAAGTCATTCCTAACAGTAACTTCTATGTATCCAGAACGGCCTACAGAGATAATACTTCTGTTTATCACGTAAGTGGGAAAAAGACTACATTTAAGGATGTTGGAATTCTTCTTCGAAGTCATGGAATTGACTTGGACCATAATAGATTTTTAATCTTACAGGGTGAAGTTGAACAAATCGCTATGATGAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGATATAATTGGTTCTGGACGACTAAATGAACCTATTAAAGTCTTGTGTCGGAGAGTTGAAATATTAAATGAACACAGAGGAGAGAAGTTAAACAGAGTTAAGATGGTAGAAAAGGAAAAGGATGCCTTAGAAGGAGAGAAAAACATAGCCATTGAATTTCTTACCTTGGAAAATGAAATATTTAGAAAAAAGAATCATGTTTGTCAGTATTACATTTATGATTTGCAGAAACGAATTGCTGAAATGGAGACTCAAAAGGAAAAAATAAATGAAGATACCAAAGAAATTAATGAGAAAAGCAATATACTGTCAAATGAAATGAAAGCTAAGAATAAAGCTGTAAAAGATGTAGAGAAGAAGCTGAATAAAATTACAAAATTTATTGAGGAGAACAAAGAAAAATTTACAAAACTAGATTTGGAAGATGTTCAAGTTAGGGAAAAATTGAAACATGCTACAAGTAAAGCCAAAAAACTAGAGAAACAACTTCAAAAAGATAAAGAAAAGGTTGAAGAATTTAAAAGTATACCTACCAAGAGTGAGAATATCATAAGGGAGACAACAACTAAAAACAATGCCCTTGAGAAAGAAAAAGAAAAAGAAGAAGAAAAATTAAAGGAAGTTATGGATAGCCTTAAACAGGAAACACAAGACCTTCAAAAAGAAAAAGAAAGTCGAGAGAAAGAACTTATGGACTTCAGCAAATCAGTAAATGAAGCACGTTCAAAGATGGATGTAGCTCAATCAGAACTTGATATCTATCTCAGGCGTCATAATACTGCAGTGTCTCAATTAGGTAAAGCCAAAGAAGCTCTAATGGCAGCTTCTGAGACTCTCAAAGAAAGGAAAGCTGCAATTGGAGATATAGAGGCAAAACTCCCTCAAACTGAACATGAGCTAAAGGAGAAAGAAAAAGAACTTCAAAAACTTACACAAGAAGAAATAAATTTCAAAAGTTTGGTTCGTGATCTTTTCCAAAAAGTTGAAGAAGCAAAGAGTTCCTTAGCAATGAATCGAAGTAGGGGAAAAGTCCTTGATGCAATAATTCAAGAAAAAAAATCTGGCAGAATTCCAGGAATATATGGACGACTGGGGGACTTAGGAACAATTGATGAAAAATACGATGTTGCTATTTCATCTTGTTGTCATGCATTAGACTACATTGTTGTTGATTCTATTGATACAGCCCAAGAATGTGTAAACTTCCTTAAAAGACAAAATATTGGAGTTGCAACCTTCATAGGTTTGGATAAGATGGCAGTGTGGGCAAAGAAAATGACCAAAATTCAAACTCCTGAGAATACGCCTCGGTTATTTGATTTAGTAAAAGTAAAAGATGGGGCAATTCGCCAAGCTTTTTACTTTGCCTTACGGGATACCTTAGTAGCTGACAGCTTAGATCAAGCCACACGAGTAGCTTACCAAAAAGATAGAAGATGGAGAGTGGTAACATTACAAGGGCAAATCATAGAACAGTCAGGTACAATGACTGGCGGTGGAAGCAAAGTAATGAAAGGAAGGATGGGTTCATCAGTTGTTGTTGAAATCTCAGAAGAAGAGGTAAATAAAATGGAATCACAGTTGCAGAGAGACTCTCAAAAAGCAGTGCAGATTCAGGAACAGAAAGTACAACTGGAAGAAGCAATACTTAGGTTAAGGCATAGTGAACGAGAAATGAGGAATACACTAGAAAAGTTTTCTGCAAGCATCCAGCGTTTATCAGAGCAAGAAGAATATTTGAATGTCCAAGTTAAGGAACTTGAAGCTAATGTACTTGCTACAGTCCCTGACAAAAAACAGCAGAAAGTGCTTGAAGAAAATGTTAATACTTTCAAGACAGAGTATAACAGTGTGGCTGAGAGAGCTGGTAAAGTGGAAGCTGAGGTTAAAAGGTTACACAATATCATCGTAGAAATCAATAACCATAAACTCAAGGCCCAACAAGACAAACTTGATAAAATAAATAAGCAATTAGATGAATGTGCTTCTGCTATTACTAAAGCACAAGTGGCAATCAAGACTGCTGACAGAAATCTTAAAAAAGCACAAGACAATGTCTTACGTACAGAGAAAGAAATAAAAGATACTGAGAAAGAAGTAGATGACTTAACAACAGAGCTAAAAAGTCTTGAAGACAAAGCAGCAGAGGTTGTAAAGAATACAAATGATGCGGAGGCATCCTTACCAGAAATCCAGAAAGAACATCGAAACCTACTTCAAGAACTAAAAGTAATTCAGGAAAATGAACATGCTCTCCAAAAAGATGCACTTAGTATTAAGTTGAAACTTGAACAAATAGATGGTCACATAGGTGAACATAATTCTAAAATAAAATATTGGCAAAGAGAGATTTCAAAAATATCACTGCATCCCATAGAAGATAATCATGTTGAAAAGATTCCAGTTCTAAGCCCAGAAGAGCTTGAAGCAATCAAGAACCCAGATTCTATAACAAATCAAATTGCAGTTTTGGAAGCCCAGTGTCATGAAATGAAACCAAATCTTGGCGCCATTGCAGATTATAAAAAGAAGGAAGAATTATATTTACAACGGGTAGCAGAATTGGACAAAATTACTAATGAAAGAGATAATTTTAGACAGGCATATGAAGATCTTCGAAAACAAAGACTTAATGAATTCATGGCAGGTTTTTACATAATAACAAATAAATTAAAGGAAAATTACCAAATGCTTACTTTGGGAGGTGATGCTGAGCTGGACCTTGTAGACAGCATGGATCCTTTCTCTGAAGGAATCACATTCAGTGTTCGACCACCTAAAAAAAGTTGGAAGAAGATCTTCAACCTTTCAGGAGGAGAGAAAACACTTAGTTCATTGGCTTTAGTGTTTGCTCTTCATCACTATAAACCCACTCCCCTGTACTTCATGGATGAGATTGATGCAGCCCTTGATTTCAAAAATGTTTCTATTGTTGCATTTTACATATATGAACAAACAAAAAATGCCCAGTTCATAATAATTTCTCTTCGAAATAATATGTTTGAGATTTCAGATAGACTTATTGGAATTTACAAGACATACAATATAACAAAAAGCGTTGCAGTAAACCCAAAAGAAATTGCATCTAAAGGACTTTGCTAAACTTGCTTAATCTGAAGATTTTTCATATCTTACCATAGATTCAACATGTTGTATTTCTCTATGTAAAGGGTTATAAATTATATAAAATACCTATTCTTAAATTGTATCATATAGTTTCTATTTTATGCTGTTAATTAAGAGATGTTACAAGTTTAATAAAATATTCTCTATGCCTGTTTCTAAGAGATTGTAAGAATCTGACAGTTTTGTAAGTGGCAACTATGGAGAAAATAAGATGCCTGGACTATCAGATAACTTCCCCTTATGCAGAGTTAAAAGTATATTACTTTGATGAACAGTACAGTTGTAAACTAAACCATGTTAAACCAGTGATTCTGAATTGCAAGAATGAGAATTTTAATATTATACATTCTTAAACTCAGTGTACTTGACTGTTTAAAACATTTGTGAAAGGGCCAGCAAATGTCTGAATAACTTGAGTGGGTATATATACCACTATAGTTGCTTCAGAAAAAGAATGATTTAAGTGTATAAGGGTTAATTTCTTTAGTATAAATGGAAATT EMBV3_38789 CTGTGGTTGGAGCCACGACAGTCTTTTTCGTCCCAGGAACACAAAACAGTTTGTAAGTGT Gene GeneID:783104|HPS3:XM_002685025:197_cdna Constitutive 0 NULL GeneID:783104 1 GENE HPS3 NULL Hermansky-Pudlak syndrome 3 EMBV3_03528 GACCACAAAATCCAACACTTAAGACTGCAGGGACAAATGCCAGCCTCTATGAGGGCAGGT Gene GeneID:539411|DDX28:NM_001105422:378_cdna Constitutive 0 NULL GeneID:539411 18 GENE DDX28 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 EMBV3_38950 GACAGGAGAATGGCCTAGTCGTTCCTCTCAACATGGACACAGCAAACTCAGCACAGTCAC Gene GeneID:100139219|MTOR:XM_002694043:118_cdna Constitutive 0 NULL GeneID:100139219 16 GENE MTOR NULL mechanistic target of rapamycin (serine/threonine kinase) EMBV3_05300 TGGGGTTAACGTGGGCACCACAGCCCTATGGAAGCATCTGAAAAGCATGCACAAAGACGA Gene GeneID:539880|ZBED2:XM_002684763:258_cdna Constitutive 0 NULL GeneID:539880 1 GENE ZBED2 NULL zinc finger, BED-type containing 2 EMBV3_21719 GAGGTGCACTCAGGATCTGAACCACAATTATATGTACTGGTACCGACAAGACCTGGGACG Gene GeneID:789111|LOC789111:XM_002687086:319_cdna Constitutive 0 NULL GeneID:789111 4 GENE LOC789111 NULL similar to T-cell receptor beta chain V region C5 EMBV3_20494 GTCTTATGCACGAATTGTGTCCTCCATCCTCAAGGTCCCTTCTGCCAAGGGCATCTGCAA Gene GeneID:618124|LOC618124:XM_002695739:422_cdna Constitutive 0 NULL GeneID:618124 19 GENE LOC618124 NULL similar to olfactory receptor 376 EMBV3_21896 GCCCGGATCAGGAAGACGCCCCGGCCTCAGGACTGGCTGTGAGCTTGGGGCTGGGAGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37875 TGTTCAGTAATGCACTTTATTGTCCAAAGACAGTCAGGGGTCAGCATAAGGAGCGGGGGC Gene BVT0102_120818 + 0 NULL GK000019.2:51829660-51833820 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094436 TCONS_00094439 TCONS_00094437 TCONS_00094435 TCONS_00094440 TCONS_00097678 TCONS_00094434 2 XLOC_057447 XLOC_058311 Coding TCONS_00097678 XLOC_058311 NonCoding NonCoding NPLOC4 19:51829473-51831140 x TSS72325 850 2 TCONS_00097678_3 80 2 0.490996398559424 0.010292033326758 0.0109883996331324 0.00657710186768972 0.00227997387049514 0.00659570425691013 0.00115015420006136 0.00417731266015034 0.0110912608170323 0.00468905794092071 0.00297638406130952 0.00108747556228818 0.000658315522830224 0.000627273493435454 0.0037655598821616 0.000656630283241006 0.0232435383940171 1.92316575087234e-55 0.0154028737759476 0.0158598517112014 0.00671512234158574 0.00473688304458287 0.00573599128760749 0.00263318140282923 0.0165486857677463 0.0182945123937502 0.00667681554571454 0.00623713048743198 0.0054289989112338 0.00277511714809208 0.00586232716605748 NM_001192189.1 NPLOC4 Bos taurus nuclear protein localization 4 homolog (S. cerevisiae) (NPLOC4), mRNA. 5e-29 132 98.72 0.0905882352941176 NM_017921.2 NPLOC4 Homo sapiens nuclear protein localization 4 homolog (S. cerevisiae) (NPLOC4), mRNA. 6e-54 215 76.03 0.403529411764706 0 noncoding 1 0 1 1 -0.565700321118578 0.0175916934787407 -0.0855614554675202 0.139687169754802 CAGGTGCTTTTATTGGTTCACTTGCAGGGCTGGAGTCCAGGCAACACTACTGCAAACCCAACCGACACACACCTGCAAGACCCAAGTGGGAGCACGGGGAGCAGACTGGTCAGTGGAGGCTGGGCACCTAGTCACCCTTCGCTGAGTTATGGTGCCTGGTGGCATGAGAGGGTGTGTCCACATGAGGGCAGGTAGGATGAAGGTGGGGCTGGGGGCCCCCTCCCTTGTGTAAAAGGAGATGGCTAAGCTGCCTGGGCCTGAGTCTGCTGGCAGGGTGCCCCCGCTCCTTATGCTGACCCCTGACTGTCTTTGGACAATAAAGTGCATTACTGAACAAAGAGTGACTCAAAACCAGAAGCAGAGAAATCACAACACTTTTTCTTTAGCTAAAAGACAGACAGAAATGAACTATGCAGATGCCAGAACTTCAGGGTGAGCAGGATATTGGTCGAAGAGAAGGTAAAGACCAGAACAAGAGGAGGAGGAACGGTGGGAGCCGTGAGGTCTGAGGTTAGCGCACTCCTGCTCCCCCTGCAGACTCACGTCTGATCAAAGGAGCAGGCGACCTGGGCCAGAACACACGCCCAGCCTTTCTGGCAGGCAGCCACAGATGAGCTGGGGAAACGGGGCTCTGTGCCTCGTGCCCCTAGAACAGGCCCAACCCACTGGCCACTTGAGTGTCCTATGCCAGGTCAACCCGGAGGTGCCAGGCACACCCCTGCCACAAGTAAACACAACACCCAGGTGTGCTCTGTTCACAGGCCAAGGGCGAGGGAGGCAGGAAAGGGCGAGCAGCAGATTCACCTGCAGACCAGGCGGACAGGAGGCCATGAGCCTCTGGCCACACATT TCONS_00094440 TCONS_00094440 r 5' 0 TCONS_00094440 TCONS_00094440 r 5' 0 EMBV3_32211 GCGTAAACAAGTACTACCCTCCGGATTTCAACCCTGAGAAGCATGGCTCGCTCAACAGAT Gene BVV0102_092935 + 0 NULL GK000007.2:12982043-13249277 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215459 TCONS_00215455 TCONS_00215453 TCONS_00215456 TCONS_00215457 TCONS_00215454 1 XLOC_130969 Coding TCONS_00215456 XLOC_130969 Coding Coding - 7:12997884-13004754 - TSS160924 197 1 TCONS_00215456_1 47 4 0.971902751492211 0.000369862907949304 5.10069428525542e-05 6.14913982834127e-07 4.19296805132782e-05 0.000132288995614255 0.00017552343835505 0.000206510961693241 0.00164093714303287 8.01023481406322e-05 6.96161204233524e-06 0 3.43965788443404e-05 0 0.000461643773625704 6.8719274728678e-06 0.000858410412501062 1.04306651202301e-10 0.000170113153778483 1.12742196389538e-10 0.000365045965974063 4.26439354575468e-09 0 0.000158607044844276 0.000149606878569614 0.0024152315244047 0.000107290982307513 0.000253585448249056 1.6251291817764e-05 0 2.63006401748446e-07 NM_001076344.1 CCDC130 Bos taurus coiled-coil domain containing 130 (CCDC130), mRNA. 4e-92 340 100.00 0.949238578680203 NM_030818.2 CCDC130 Homo sapiens coiled-coil domain containing 130 (CCDC130), mRNA. 2e-63 244 92.26 0.847715736040609 TCONS_00215456_1 sp|Q5EA37|CC130_BOVIN CC130_BOVIN Coiled-coil domain-containing protein 130; 1e-27 103 100.00 0.978723404255319 1 noncoding 0 0 0 0 -0.22458105952574 0.158083496542668 -0.0607087795522809 0.248724005180923 AGGGCAGCAGATTGGCCACGTGGAGGGCGAGGACCTGTAGGCAGCTACCAAGATGGGTGAAAGGAAAGGCGTAAACAAGTACTACCCTCCGGATTTCAACCCTGAGAAGCATGGCTCGCTCAACAGATACCACAACAGCCACCCCCTTCGGGAGCGGGCTCGGAAGCTGTCCCAGGGCATCCTCATCATCAGGTAAG TCONS_00215452 s 5' 15843 TCONS_00215452 s 5' 15930 EMBV3_17184 GATGAACGGAAGCTGATCCAGTTTGGGCTTATGAAGAACCTCATCCGGCGACTACAGAAG Gene GeneID:508487|TUSC4:NM_001015547:124_cdna Constitutive 0 NULL GeneID:508487 22 GENE TUSC4 MGC128786 tumor suppressor candidate 4 EMBV3_07633 TGGATGAGCAGTACCAGGAAGAAGGGGAAGAGGAGGTTCAGGAAGATTTGACTGAGGAGA Gene GeneID:538532|GOLIM4:XM_002684944:189_cdna UTR3_Alt 2 NULL GeneID:538532 1 GENE GOLIM4 NULL golgi integral membrane protein 4 EMBV3_10436 TCAGATTTTCTTGTTTGATTTTGAGGGATGGGGTATGGAGCTGGAGGCTGTGTGGGAGGG Gene BVV0102_057837 + 0 NULL GK000026.2:18120931-18136426 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150286 TCONS_00150278 1 XLOC_091840 Coding TCONS_00150278 XLOC_091840 Coding Coding LCOR 26:18034526-18130730 j TSS112606 12587 1 TCONS_00150278_11 1552 0.0237546675141019 8 0.869245241832375 0.000178841827040319 0.000281531002171936 0.000157473113561937 0.000144857762717014 0.000162801610079845 8.07023183671448e-05 0.000324360080197069 2.99052722949469e-122 0.000405498292269986 0 0.000711991446809162 2.81337976495875e-152 4.46794455103923e-05 2.14627432226017e-50 0.000213373378878795 0.0011164593215699 0 1.07987663425727e-07 0.000148019892387904 0.000424437717162286 4.06166679021421e-28 0.000640612896434206 8.25928574697044e-38 0.000453364473408654 0.000652502507517471 6.68678462502738e-49 0.000133767975296489 0.000375041038613194 7.86581090281116e-60 0.000716579534627557 XM_005225651.1 LCOR PREDICTED: Bos taurus ligand dependent nuclear receptor corepressor (LCOR), transcript variant X1, mRNA. 0.0 1.065e+04 100.00 0.469134821641376 NM_015652.2 C10orf12 Homo sapiens chromosome 10 open reading frame 12 (C10orf12), mRNA. 0.0 4946 84.20 0.361245729721141 TCONS_00150278_11 sp|Q8N655|CJ012_HUMAN CJ012_HUMAN Uncharacterized protein C10orf12; 0.0 1832 76.78 0.802835051546392 0 coding 0 0 0 0 0.476610545694132 0.16141048614272 0.476610545694132 0.16141048614272 ACAGATGAGGCACTGAAAAATTAAGGAACTTGCCAGAGGTCACACAACTAGAAAAGGGTTTGAAAGTATTCTTGAAGGGCTGTTTGGACCTGCATTATTAAAAGATCTCAGTTTATTTAAAGACTGTGAACCTGAAAGCATTTCTGATTGGACTTTTGATGAAAATTGTCTATTCTGTTGCTTGAGAAGAGATAAAGTAAAGGGACACTTAGTCGGTCTGGATGAGCCAGCTTCGGGAGCTGGGCAAGAAGCTCTGCTTAAACAAGAGCAAGCAAAAATCATTCGATTCGAGAGACAAGCAGAAGAGTTCCTCAATGCAGTCTTTTGTAGAAAAGACAGTCCCTGGGTCTCCGACCCCAATATTCCCCTAGTGGCCCGTGAGATCATGCAGCGAATGATCCAACAATTTGCTGCTGAATATACCTCAAAAAATAGCTCTACTCAGGACCCCAGCCAGCCCAATAGCACAAAGAACCAAAGCCTGCCGAAAGCATCTCCAGTCACCACCTCTCCCACGGCTGCAACTGCTCAGAACCCTGTGCTCAGCAAACTTCTCATGGCTGACCAAGACTCACCTCTGGACCTTACTGTCAGAAAGTCTCAGTCAGAACCTAGCGAACAAGACGGTGTACTTGATCTGTCCACTAAGAAAAGTCCGTGTGCTGGCAGCACTTCCCTGAGCCATTCTCCAGGCTGCTCCAGTACTCAAGGGAACGGTGAGAACTCAGCAGAGGCAATAGCAGTACATTCTAATCATCAGTCAAAGTCCCCACTGGAGAAGTTTATGGTCAAACTGTGCACACATCATCAGAAGCAGTTCATTCGTGTTCTGAACGATCTGTACACTGAGTCTCAGCCCAGCTCTGAGGACCTGCAGTCTTCTGATTCTGGAGCCATGGACGCCTCCACCTGCGATGCTGGCTGTGCCCAGCTAGGCACCAGACATGCAGAAAAGGATGCTCTGTGTCTCAACATGAAGTCTTCTACTTCTGTAGACTTGTCCATAGACTCTGGAGGCTCTCATAGCCCTCCACATTTGACAGAGCAGGCCCTAAAGGAGCCTCTGCCTGAGACAAATTCTGTAGATGGACGAGAGAAGACTCTGACTATTGTCCAAAAAGATTCCTCTGAACTTCCAACCACTAAACCTAATTCAATGGATAATTCCACTCTGGGATACCTCACTGCACCGAATTCTTCCTCATTAAACTTCCACCGCATCTCTAAGAACCTGGAGGGGCAGACCACTGAACAGGAGCAAGACACAGATGTGAAAATATGTGAAGATGGTAAAGACCATGTGCAGAGCGCAGCTTTAGTAGAAAATCTAATTGCAGTAAAAGCGGCAGCTGAAAATAATGAGGAGAGCAACAGCTGTATTGTTTCTCAAAGAAATTCATTCAAAGCTTTATCAGAAGAGGCTTGGGACTCAGGGTTTATGGGGAATTCACCTAGAACTGCTGACAAAGAGAATGCTTTACAGTGTAGCTCAAAAACACCTTTACGCCAGGACTTAGAGGCATGTGAACAAGATTCAAGGCCAAAGCAAGAGAACCATCTTCACTCCCTAGGAAGAAATAAAATGGGTTACCATTTACAGCCCAGTGATAAGAGCCAGTTTGATCATTCCAAAGATGGTTGGTTAGCCCCCAGCCCCATGCCACCTGTACACAAAGCATCGAATGGACACTCACGAACCAAGATGATACCCACCTCCATTAAGACAGCTCGGAAAAGTAAAAGAGCATCAGGGTTGAGGATAAATGATTATGATAACCAGTGTGATGTCGTTTATATCAGCCAGCCAATAACAGAATGCCACTTTGAGAATCAAAGATCGATATTATCTTCTCGGAAAACAGCCAGGAAGAGTACTCGAGGATACTTTTTCAATGGCGATTGTTGTGAGCTGCCAACCGTTCGCACGCTGGCCAAGAATTTACACTCCCAAGAAAAAGCAAGCTGCTCAACTGTGGCATCAGAGGCAGTGGTCACTCCCAAGCAGACCCTTGTCACGTCAGCACCTCAACCTACAGTAGAAGTAGAGCATCCCAGAGAAGACAAGCCTGAAGAACCTAGTAAAGAAACAACCCCTCTCACGGAAGGAGACAGAGATGCATCACCTGAAAAGGAATCTCAAGAGCCAGAGGTTTGCCTCGTGACGAATAACGCAAACCCAAGTGGCTCCCCCACATCAAAAGAAACAGCAGCCTCCAGCCCAGTGTGGCCCCTCCCTGCTCATCTTCCTGAAGAGGACCCACCAGAAGGCAGCTCCATGGTCTCAGCTCCCACAGGAAGTGAGATGTCTTCCCCTGAACGAGACCAGCAGCCAGCTGAAGTGCTGAGTACAGAGGAGATGAGTGTACCCCGAGACTGTCCCCTACTTCCCTCCGCAGACAGCATTTCTGAGGGAGGCAGTGACGATGTTGCCCCCAGACCTGTTTCCCCTCCTGAAACAGCAGAGAGAGAGGAAAGCCCTCTGTGTTCAGAAAGTCAAAGTGCCTCCGCGGGCTTGGATCCTCCCATGAGCCCAGGAAAGGCCGAGGAAGAGCCAAGTGTCGCTACTGAGGCTGAGACCGAAGACGCTCAAGAGCTAGATACCGACCCACTCTCGAAGGAAAGCAGCACTTTGACAAATGAAAACCCCAGTGAGATTGAGGAAAGTGAGGCAGCAGGTGGTACAGAAAAACTAGAGGGAGAGGACGGTGATGTAAAACATCCTTCAGAGAAAGATGCATGCGATCAAAACACCGAGTCACCTGAAGAAAATCTGGACAAGAAGAAAAAAGGTAGAAAATTCCCGGAGGCCTCTGATAGGTGTCTGCGAAGTCAACTTGCAGATTCTTCCTCTGCCGAGAGGTGCCTAAAAAATCAAAGTTCAGATTCTTCCTCTCCTAGTGCTGATGTCAAGGTTTCTAAAAGTTCTGGTGCAAAACGCTCTAAAAAAGAAGGGTACCCTGTTGGGACAATACCCGAGAGCTTCCCTACTGAAGGCTGCCATACAAAAGCTCTAGAAGACACTGAAAACCCAGTTGTCAACGAAAAGACCCCTGAGAAAGACGCTGAGCAGGAGGTTGAAGTGGGTGGGGTGATCACCAGGCAGACTTTGAAAAACATGCTGGTGAAAGAAGTCAAGGGGGAAGAAGGAAGTATTTTCCCCAGCAGTGATCCCTTAGCCACAGTTGGCCAGACCCTGCCTGGAGAGAAACTGGAAATCTATGTTCAGTCTAAATTAGGTGAGAACAGTACTCAAGAGCCCTCTGAAAGCATTCCTTGTACTTTCCCAGAACAATCACAGGGGAAGCCAGGACCTGTTCCTGCAAAGGAGACGGAGGAGGCTGTGAATGAAACAGACAGTGCCGACAGCCAGCATAAAGATGGCGATAGTGATGACGTGCCGTCTAGCACGCTGGGATCATCAAGTAGTGGAAATGACGACACTGCAGTGCCCCCAAAATGGGCCCCACGGCTTACAAGACTGACCTCCTCCACCTACAACCTAAGACACACTCATTCTTTGGACTCTTTGGATACTATAAAAGTGACTTCCGAAAAGGAAGCAGCACAAGGAAGCCCAATCCCAAAGGAAAATGCAGCTTCCGAGAGTGGAGATCCCATAGATGAGGGTGATGTGGACACCGTGATGGACGAGCAGCCCAAGTTTGTGGAATGGTGTGCTGAGGAGGAGAACCAAGAGCTCATTGCCAACTTCAACGCCCAGTACATGAAAGTTCAGAAGGGCTGGATCCAGCTGGAGAAAGAAGCCCAGCCAACGCCAAGGGCAAGGAACAAGTCTGATAAGCTGAAGGAGATTTGGAAAAGCAAGAAAAGGTCACGGAAATGTCGGGGTTCACTGGAGGTTCAGAAGTTTTCTCCTGTTCAGATGCTGTTTATGACAAACTTTAAATTGTCTAATGTTTGTAAGTGGTTCTTAGAGACAACTGAAACCCGGTCTCTCGTCATTGTGAAGAAGGTCAATACTCGTCTTCCAGGTGACATCCCACCCGTCAAGCACCCTCTTCAGAAGTACCCTCCTTCCAGCCTGTACCCCAGTTCACTACAGGCCGAACGCTTGAAAAAACACTTGAAGAAATTTCCTGGAGCTACTCCTGCCAAGAACAATTGGAAAACACAGAAGCTCTGGGCTAAATTTCGAGAGAATCCCGACCAGGTGGAGCCAGAGGATGGCAGTGACGTGAGCCTCAGCTCCAGTCCTGAAGAGAGTGTAGAGGAGGCCAAGGAAGGTAGAAGCAGCCATCCTCCCACCAGCTCACCGACCCCAGCCAGTACCCGCATCCTTAGGAAGTACTCCAACATTCGAGGAAAGCTCAGAGCCCAGCAGCGTTTGATCAGGAACGAGAAACTCGAAAGCCCAGTTGGTCCGGCTGTGGAAAGCAAACAGAGTTGCAAGAGTGTGTGCATCAACCCTCTGATGTCCCCCAAGCTCGCCCTGCAAGTCGGTGCAGATGGGTTTCCCATTAAACCCAAGAGCCCCGATGCAACGAAGGCAAGGAAAGGGAAGCAGGTGCCTGAGGTCTTGCCAAAAGCCGAGGTTCAGAATAAACGCAGGAGGACAGAAGGCGGCAGCACTCAGGACAGGAAGGACAAAGGGCCTGCGGTGAGGGCCAGCAGAGAAAGGCATGTTGATGGGTCCACCAGAATCTCCGCTGCCAAGAAGCCAGCCGCAAGGGACAGAAGCAGCCAGCTGCCCAAAAAGACATCTTCAAAAGAGAATAAAGTGAAGATCCCTAAAAAATCACCTGGGAAGAGCTGCCCGCCCTCCAGGAAAGAAAAAGAGAATGCAAACAAAAGACCTACCCAGCCCTCTGCCTCGGATCCGGTGACAAAATCTGCAAAGCAAAAAGGGGCAGGTGAGTCCTCTTCCAGGCCACAGAAAGCCACAAATAGAAAGCAGAGCAGTGGAAAGACTCGGGCCAGACCCTCAACAAAAACCCCAGAGAACAGTGCGGCCCAGAGAAAGCGAAAGCGGAAGGCAAAGCTGGACTCTTCGCACAGCAAACGAAGGCGGTTGGATGCAAAGTGATTCGCAGGGCAGGAGCCAGAGCTAAAACTGTTCTATTAGAAGCAACCTTTATTTTGCATTAACTAAATCTGCTTTTATAAGCTTATCAAGCCTTTCAAATCTGCAGTTAATGGAAAACACCACAATTTAAGATGTCAGAAAGTGCGTCTCAGATGGAGAAGGGAACTTGCAGAGTCTTTCTCTGAGGCTGAGTAAGGGAAGTTATATATTATATTCTGGTTGTTCCTTGGGTTTTAAACTTGGAACCAAGCAGTTTTAGTTTTTAAAAGTACAGTGCCTTATTTATCCTTTTTGTTTTTAAATTTACAAAAGCTAAAAAGCTGATCTATGTGATTAAAGGCTTGTATTTTATACTTGACGCACAAGCACTTGTACTGTAGCCAAGAAGACCACCATCACGCACATAAACGTAGCTTTTCAGCAGCCACCCTGCAGTGTCAGTACACGAACAGATGCTCCTCTTTGCAAACCCCCGCAGTGAGCTTCCCTCTGTCTTGTTTGTCTAAACGATATTTGAAAGCTGAACCAAATCACTTTTACAGTATGTGGAGAATGCAGAGGGAATTTATAATTATTATAAAAGATTAACACTTCTGTTACCCCTTTTTAAAAATTCGTATTCGTTGTTGGTCACTCATCTCTGATGTTTTGTCATTTGAGGGAATATATTCTAAATTCTGTGCCCGTGGGACAAAAGGTTGTCACAAGGTGTTAATATTGATATATGAGGTCTGAAAATTACTCACATCCCCCAAACTGTTTGCATTACTGATTCTTCCCATCCTTTTCATTTTTGATCTTGCACGCTTGCTAGCACACTAATGAGGTTTTCATCCTACTTTGGGAGAAAAAAAAAAAAAAGCTAATGTCTTTTTGCTGTAATTTGACGATTGGGATAAGAGTGACCGTTCTAAGTATTTTTCTTGTCTTGAGTACTTCTGTATTCAAAGAAAGCCAAAATGTTGTTTTCAGTAATAGGAAAGTTTAAAAGAGTGTGTGTGTGTTTGGGGGTATTTGCATGTGGTTGTAAAGCCACAAATGTCTCCCATTCCCCCAGTTAAATTCTTCTCCATGCAGTGTGATAGGCTGTTCATGAGCTGAGTAATTAGCATAGGCCAGATGGCTTAAATGTAGCCTAGGGTCTCTATGAGCATCTCCCAAATCACTATGGCACCAGACTCAGAATTATAAAAAGGTCAGAGCAGCCTTTCAGTTGGAGAAAGTAGCACCAACATCTCATTGTGTGCCCACACACACCCCAGTACCAGGAGCTGATGCTCAGCTGGTATTCCAGTGTGAAATGTACATGTTTAGAGTAGATGCCCTTTCTGATGGATTAACATCATACTAGTAGTTAATGCTTATAGAATCACAATGGCCTCTATCACGTCGGGCTCTGTTCCATGGCTCAGAAGCGAGAGCTGCAATATTTGTGACTAATGTTGTTTGAGACCTGAAATGAGTGTACTGGCTTTACCTTGGTGCCTATAGCATCGCTCCATTTGGGCCGCTCTGCCAATAAGTCTTGGTCGCTAAAGCTTCAGCCAGCTTCTCTGACATGCTCTGTCCCCAAAATAGGCTCGTATGGACAGCTGCTATTCCGTCCTTTTTATTAAAAGATTTTCCATCCCTATTGCTTGAAATCTGTTTGGATAAACCCAGATGTACCTGTTTTCATGCATTAGTTCATTCAGATCATGATAAAACAAGTTTTCTACCCATTCTGTTAAAGTTTTGCTGTATATAATGAAAACTTCTGGGATAGGATTAGGAAGCAGTGTTTGATTCATGGGAAACTGAGCATGGTGTTGATTTTTGCAGATAGTGAAGCTTACTATCTTCAAAGAAGCCTTCCCCGCTCCACCCCCCCCCCCCCCACCAGTATCTCCTCTATCCCATGAGTCTTTTTTTCTTTTTTGTATCTTTGACCTTGGCCATTCCAGAGCTACCTATATTAATGAAACTGCTGAGTGTGTGTGTGTTGGCAACCTTCCTCAGCATTAAGTTGCACAGAAGCATTAACGTGTTTTAAGTAGGTTCATTTAATCTATGTAAGTGGTTTTAAAGTTTTTTAGAAAATCTTTTCATAGAGCCGTCACTGGATATTGTTTTTGTGGTGACTTTAACAGTGGAGGTTTGCCCACATCAGGTGTGCTGACCCCTGTACGTACGTTCAGGGTGCCCCGTAGCTGCATACAGACTACCTTGTAAGGGTGCGTGGGTTAGGTTAGGGAGAGATGCCAGGCTGGAGGTAGGTGGCACTTTTCTAGTTGCAGGTTATAATCCATTCCATTCCTTTTCTCATTTCTTTTTCATTTTTAAAAGCTTATCACTTCAAGATCATAGCCTTCTCTCCCATTCTAGACAGCATTGGAGAAAAGATATCAATGTGCATCTATTTATTTTATATACCTACCAATGCAATGGCTCATCTTTAAAATCAACTTACACTTTATAACAGACTACATTTAAATAGATTGGGATTCTACATAAGTAAGACACTTAAAAGTTTAGAATTATATTTGTTGAATCTCACTTTTGCTGATTCAGTTAACTTTACTAATAGAAGAAAGGAAAAAAGTAGACTTGAGGTCCAACTCTGGAAGGCCCATTTACACTTGCAGCAGATGCTGGCAAGCCTGTCTCTCAGACATTTCCAAGCCTAGACTTGGTTCTGACTCAAGACTCCCCTTGATCTCCCCTCCTTGCCAGACCTCCTTTCTGTAGCCATCGTCCCAGTGTGGCTTGCACCGGATGCAAAGGCAGTCTGTCCCACCTTCTGGATTCCAAATTTAAAAGGAATTCAGCTCCTGGGCCTGTACTCAGAGAAGTGACTTTTGGAGCTGACGTTGATGATCAGAGAACATCAGTATTCGCTGTGAGCTTCTGGGGGAGCTGGAAGACGCCTGGAAAGCAGTCACTAAAGCTCCACCATAGCTCCCCAGAGCTGGCCCTCTTTAGGAGGCCCTTTTCCATCTCCCATTTCTACCCTCTGAGGCTCCCCGAGTTTGGAGGAACCACCTGGAATCTGTGCCCTTGGTCAGGGTCCAGAACCTCACCCCTGGCACTGGCGCAGACATGTTAACGGTCTTGCAGCACAGCAGGAAGGCCATGGACCTTTGTTCTGCTTGTGAGGCTACGTATAGACAAACGTTAGTCACGTCTATTAACCTGAAGTTGCTAGTCCCTTGGCTCCCTTTGGTAGGCCAGTTCTGTTGTATCTGCATTTCATTAAAGACTTCTACACAAGCCTTATTTTAAAAATAATCTTGGGCCATGGGTTTCATGCCTCCTTGTTCCTGTGTAGTATAGATGGAAGAGGTGTAGTTAGTCATCACTTCATAAACGTGGTTCTTCTAATGGGGTCCTCTGTGCGTCATGAGACTGGGCAGGTAAATTCCTCACAGTTCAGATAGGTCATCAGTAAACACATCACTTCATGACAGTCATTTTGAAGTTTGGACTCTTCTCCCTTGGGATGAATTCTGTAGTGAAGACTGAAGCTGTCACTGTCATTTGTGGGCAGCGTGCCTATTGAGCAGTGGGCCTAAGCGCCAAGAAGGACAGGCCAACGTGCCACGTGAGGCAAGCTGGAGATGCTGTAGTGTCACCATCGGTGAGTCTGGTATCTGGTCACTTTCCCTGGGACAGAACTGGAATTTCCCCAGGTGCTGGCAAAGGGTACCCCAGCCGCCTGCTCCTTATGGTTTCAGGTCAGCCCATGCAGGCTCTCATTTGGCCTATAGATGATCCTTCACTGCTCTGCAAACTGTGGGCTGGTCATGCTTTTGTAAATAAAAGTGTATTGGAACACAGCCCTACCCACTCATTTAGGTATTATCAATGGCTGTATGTATTTACAGCAGAGTTGAGTGTCTGTAGCAGAGACCACATGGACCACAAAGCCTAAAATATTTACTCCTTGGATCTTTGAGAAAAAGTTTGTTGACCCATGCTTGAGAGAAGAATCTTTTTTCAGGGGGCTGGAGGGGAGGGGAACTTAGCTGGTTTATCTTCTCCTTTCTCCTGCCTCTTCTTTCTGTCCTCTTCTCCTTCCTCCTCATCTTACCTCAATTTTGTTCCTTTTATATCTTTATTTTTTCTTGCTACGAAAGAGACATGTTGCCACTGCACATCAAGTACCATCTCCTGAAACCTGAACTGCCTTAGCCTCACATCCTGTTAGAATCTCCCATCACCTTTAGCCTCTAGAGTCAGAATCCGTGAGCAAATAGGAATTGGAGTTGTAAAAGCATGTGGCCTGGGCCTCTCCTTTCATTCCGCTTTTATCATAGACTTGACTCTGGCTTCACTTCTTGTTTATTACTAATCAAGTAAGCCAAGATTTTCTTTCTTTCAAAGTTAGTTCAGACTTCGTTAGGTGGATGTTCAGTTTTCTGAACCTTACGTTTAGGTATGAAAAGCCTTTTCACAAAGGGAAAAAAAAAAGTCCAATCACAAACCCAAATTGTTGTTTATTATAGTTCTGGCCAGCTTCTAGGAAAATGTATTGACGTTGATATTTTTTTCAGTCACACACTCTTCTTTCAAAATAACTATATTAAAAGCAAGCCAACAACTGAAAAACAGAAGCTTGAAGTGCTTTAGAAAGAATAGTAGAAAATTGGAGCATATTATAACCTGAATGTGACTGAGAAGTTATGGATGATATCTTTAGGTTAAATCCAGTTAACTTCCAAGGTGTTGTCTTCTCCCTCCCCAAAACTCAAGGATCCGTTTCTATGCTTTTTATCAAAATGAAGGATTGATAAAATTTTGTCAGTGGCTCTGAAACAATGACTGTTTCGTATGTTTTGAAACAGATAATTATCATTTGAATTGTTTACTATGAGTTTTTATCTTCTTATGGCTTGATATCCACTGAAATACTGAAATTTTTCCAAGTATGAAGTCATGTCTGTGTCAGGCATCCACAAGGCAGTCCTCACATCCCAGCATTGTGTACTTTGCCCCAGGCTTGCTCCCAAGTCCTTTTCAGGGAAAAAAGAACAAAAAGATTACTGTAGTTAAAACTAGCAGGATTTTGGGAAGCCTGTTGAGACAGCCTTTGATATAGCTCATCCCTTGAAACGTGAGAGCCAACTGCTGTCATGTACAGTGCATGGTCTGGAAGACAAAGGTCTGACCTCCTTCCCTGAAAGATGTTAAGTCATGCGGAGGCAAAACCCCAGAGCCCTCCGATGCTGCTCCCAGCTCAGGCCTCGCCATGCTATACTGAGGACCCAGGGAATCACCTGGGGCACTTTGCAGGCATCCTTGCTCATGCTTTTTTGCCTCTGGTTTGAGCTAAAGCTGGCTCTTCCTTGCAATGCCTTCCCTTTGATCCTTTTCCCAGAGCCCCAGTGGTTTACGTCAGTGCTCAGAGGGGCCGGCGAGCTCGGTGACAGAGGCTCTTTCACCTGCGTGGGACCATTCCATTTAACACGAAGTGCTCTGTAGGCAAGCCACATGGAAGTAGCTTTTTTCTCATTAAAAAGCTACTCATTTTTGGCTCATTAAAAAAGATCCAACTTGCCCATGGTTGTATAATCCGCCAGAGATTGGAGGAATGCATTAAACAAGGTATAATGGGTTATGTTTTAAAGAAAAAGAGACCCATTTTTTTGTGTGGGTTGTAATGGGTTATGTTTTAAAGAAAAAGAGACCCATTTTTAGACCCACTACAAGTGGTCCACATAGCCTAAAATATAAACTACTTAATACCTGACCCTTTGCAGAAAAGGTTTACGGATCCTTAAGGGCCCAACCTTTGCAGTGCGTCATTCAGGATCAAATTGTGTGGTCAGTTAGGCACAAATACATGTTTTTCATGGCGTCCAGCACTGCAGCATTCCTTTCCTTTTAGATTTTACCGTTCCTGGCCCGTTGATCTTAGCACGCAGCTGCTATCCCACATTATTCCTAAATAATGTTCGTGTATTAAAGAACACATCTTCCTTTGTGCATTGAATATTTGTTGAATTGTGGACATTCAATCTGATCTACCAGAATACCAAGTTTAAAGTGAAAAGTACAAAGTCTTAAACTAAAAGTACTACGATTGTCCTCATGTTTATGAGTTAAGGTGAACTTGACTCTCATGGAACGACATTCCTCGACAGCAGTGCTCAGCACACACGGATTTACTCATGAACTCCAGAGCCTAGAACACACCCCTCCCCGCAGGTACGGGGCGTGCTGGTTTCACCCCAGAAACCATACAGTGCATTTGTGTACAGTATGTTGGCGAGTTCATCACTTCCCAAGCTTCGGTCGTCACTTGTGGACATACATGGCTGGTCTTTGCCTGTTTGAACCTCATTCCAGATCCCCCATTCTCAACTATCTTAAAAATACCAGCATGTCAATGGCACCTTGTCAGCACACCAGCAGCTTTAGACCGAAGTTCAGGGCTCTCCAGCCCGGCCAGCGAAACCCACTCCTGCCTGGTCAGGCCTAGCTCACCTCATTTTAAGGCCCCACCTTTGGCATCTTGCCTCTTCCCTCTCCTTCTGCCCCCAGCCCCCTTCCAGGAGGCACCTTCTCTAGGAAGCCACCTACCTTTCGAGTGCTTCGCTGAACATGTGTATGTCATATTAGAAGCATTTCATGACTATTTTTCTTCTCATGTTTAGCCATTGGGTCCAAATGCTATTCAGCTTATCAACTTTCTCACTCAAGTTGTTTTCTGTAATCTACACTTCATGTCATCTTATAGCAAACGCTGTAGAATCTGGGAGCTAGTTTGTGGAAGAGATGCTGTACAAACAAGATTTGCATAATTTTGTATATTTATACTACAGGTAGGGATGAGTTAGAGCCCTATAGCTTAAGGTTGTTAGTTTCACCAGTGATTTCTTCATTCTTAGCTCTAGGAGAGTGTGTGACTGATTTCAAATACATATATATAATACATATTTATACACACCACTGTGAAATTTATTTCACTGTGTAAATAGTGGTATTTTCCTAAATCCTGCAAATGGTAACCCGGTGATCAGCATGTTTCCCTTGGGCCTGGATTTCCACTATGTTAGTGAGTGTAGGAAAATACTGTGTCTGTTATGGATGAAAATTCAATGTATGCTGTGAATTTGTTGGTTTGAAACATTGAAAATTTTTCATTAGACAATGTTTACATACCTCACCTGAAGAACCTTTGAGAGTGTATATATGAAATTTAAAATATATTAAGTTGCTTTAAAAACAATATGTATAGCTATAAAAGTTGGAGTTATTTTAACTTTGAATATGTACCAAGTCTCAAATATTGAAATCTTGTGGACTCTGTGCTTCTGTGTTCTGCTTTCCTTTTAGACTGTGTAGGAAACTGTGTTCTTGTTACTGGTAAAGGGGCCCTCAGTGAAATCCAAGCTTGGAAGAATTTCCTAGGTTGTTTCAGATTTTCTTGTTTGATTTTGAGGGATGGGGTATGGAGCTGGAGGCTGTGTGGGAGGGATTTCTCTAACATTGACATCTATTCCATGAGCTTTTCCTAGGCGCTTATTTTATTGCAGTGTATTAAACTTCTTTGATATTAAAA EMBV3_32659 GATTTTGAAATGGGAAGCCCTTCACGCTGCGTACGAGCTGCCTTTCGACAGGCACGACTG Variant GeneID:506250|HCCS:NM_001098886:11_cdna 606^692 1 EMBV3_08683 GeneID:506250 X GENE HCCS MGC152566 holocytochrome c synthase EMBV3_15965 CAGGTCTACGAGCAGGGGAAGATGACCTGTAGGAACATCACGGCCCAGCTGCCTACTAAA Variant GeneID:338068|ACVR1:NM_176663:58_cdna 416^472 1 EMBV3_14902 GeneID:338068 2 GENE ACVR1 ActR-IA activin A receptor, type I EMBV3_00912 CTGCGGCTGCTCACCTCAGGCTATCTGCAGCGCGAGAGCAAGTTCTTTGAGCACTTCATC Gene GeneID:540984|OTUB1:NM_001034719:95_cdna Constitutive 3 NULL GeneID:540984 29 GENE OTUB1 MGC127210 OTU domain, ubiquitin aldehyde binding 1 EMBV3_05691 CCTATATCGGGACCCTGTTACAGACATACCCTACGCCACTGCTCGAGCCTTCAAGATCAT Gene GeneID:534883|VPS72:NM_001015658:127_cdna Constitutive 1 NULL GeneID:534883 3 GENE VPS72 MGC134217 TCFL1 vacuolar protein sorting 72 homolog (S. cerevisiae) EMBV3_01424 TTCCTACAAGCGGACGGGATTCTTTGGAAAAATCAGCTGAAAATGGCTCGTTTCACGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10488 ATGTGCTGGAAGCTGGGAGCAAAAAGATCCTCATGAATGAGGTGGTAGAGAGGATGTGGC Gene GeneID:100298523|LOC100298523:XM_002695006:232_cdna Constitutive 0 NULL GeneID:100298523 18 GENE LOC100298523 NULL similar to androgen-binding protein eta EMBV3_11450 GAAACTTGCAGCTTTAACCTGCTGGGAATGGCAAACAATTTTACTAGACTTTATGTTGGA Gene GeneID:539369|NRP1:XM_002692084:266_cdna Constitutive 2 NULL GeneID:539369 13 GENE NRP1 NULL neuropilin 1 EMBV3_05275 TACGAGAGTGGCCCCTTCCAGCAGCGCGCCCTGCTGAAACCCTCAGCGTGTCCGCAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42755 GAGAATCGGGCGCTGCTAGGAGTTTTAACTGTTTTTGTTAATAGTGGTGTGGAGTGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26246 CATCTCAGGATTGGCAGGTTTATGAGTTACAATCACCTCTTCAGTAATTGGAACAGGAGT Gene GeneID:616372|TMEM41B:NM_001099156:237_cdna Constitutive 3 NULL GeneID:616372 15 GENE TMEM41B MGC143027 transmembrane protein 41B EMBV3_17712 AGATGGGTAACATCCCCACTTTCCAGGCCTGGATACAGGTTCAGGGAGGACAAGGATCTT Gene BVT0102_208813 + 0 NULL GK000005.2:110006140-110014542 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43299 CTCTTAGAGAATTCCGTATCGACCAAGCTTCGGCCCACTTCACACTCCCTGGGCAATAAA Gene GeneID:407235|ADIPOR1:NM_001034055:37_cdna Constitutive 3 NULL GeneID:407235 16 GENE ADIPOR1 MGC127115 adiponectin receptor 1 EMBV3_33603 CTCACTTGTTCCTGGCAATCAGCATACAAGACCCTGTACAGAAGCCTGTCATAACAGTCA Variant GeneID:508386|CD48:NM_001046002:248_cdna 148^441 1 EMBV3_07727 GeneID:508386 3 GENE CD48 MGC137557 CD48 molecule EMBV3_23174 CCTGGCTCCAGCCTTGTTTGCCATATAACATGTGTCTACTTGTGTGTCTGTTAGCAGGAG Gene GeneID:534929|VNN2:NM_001163920:11_cdna Constitutive 0 NULL GeneID:534929 9 GENE VNN2 NULL vanin 2 EMBV3_10070 GCCAGAAGTTACTTGGGCTCAAAGTTAAAGGAAGATGTCTTAGGTCCACCTCCTGACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36369 GGACTTGTGTATATACACATCGTGTATAACCCGACCAGCATGTTTTTTGTCAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_04045 AAACAAACTATGGTATATGACTCAAAACAGGAGTGATCAGCATTCCAGTTTTTCAAGGTC Variant GeneID:511003|CXHXORF23:NM_001083665:2_cdna 562^677 5 EMBV3_34730 GeneID:511003 X GENE CXHXORF23 NULL chromosome X open reading frame 23 ortholog EMBV3_34625 AAATTGCCATATGCAGGCCACTGTCAGAAGCTTTGTGCGTAACAGGGACAAGCCAGGGGA Gene BVV0101_008592 + 0 NULL GK000008.2:62566743-62600140 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21250 AGGTCCTCTGCAACAGCGTTCCTGTCTCCAACTTCACCTTCAGCCCTGACACAGAGACTC Gene GeneID:280798|GAA:NM_173913:314_cdna Constitutive 0 NULL GeneID:280798 19 GENE GAA NULL glucosidase, alpha; acid EMBV3_00085 TTGTTAACTGACAGAAACTGCAGCTATGGCTTCCTCTTCAGAGACAGGGCAGGAGAAGCC Gene GeneID:511350|CC2D1B:XM_002686403:269_cdna Constitutive 0 NULL GeneID:511350 3 GENE CC2D1B NULL coiled-coil and C2 domain containing 1B EMBV3_26654 GCCACTGCCTCTATTGCCCTGCTGGGTTCTGAAGCTAGAGTGGAGGTGGGAAAGGCTTTA Gene GeneID:514398|SLA2:NM_001035294:1051_cdna Constitutive 2 NULL GeneID:514398 13 GENE SLA2 NULL Src-like-adaptor 2 EMBV3_11498 ACCCGCCGCACCCTACCCACTAGAGCAGTGAACAAATGAAAAACATCTTGGTGTAAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04746 ATGTCAGAGAGGAGGGAGTCCTAAATGCAACCAGCCTCCTGTTCTACTCTTGCCTGCGAA Gene GeneID:515007|ZNF384:XM_002687868:115_cdna Constitutive 2 NULL GeneID:515007 5 GENE ZNF384 NMP4 NP zinc finger protein 384 EMBV3_16148 GATGCCAAAAAGGACGATGCTGTTCGGAAGGCCTACAAGTATCTAGCTGCCTTGCATGAG Gene GeneID:534246|CCDC22:NM_001076016:93_cdna Constitutive 0 NULL GeneID:534246 X GENE CCDC22 NULL coiled-coil domain containing 22 EMBV3_38112 TCTGGTTCTCTTGGATGTGGGTCTATTAGAGGCTGCTCCCTGGGTTATGGATCTAGAAGC Gene GeneID:785221|LOC785221:XM_002684595:32_cdna Constitutive 0 NULL GeneID:785221 1 GENE LOC785221 NULL similar to keratin associated protein 13-2 EMBV3_01217 GCTGAGTTCAGTATATGCAAGTGTCTGCTACAACCGCCAAATCACCTGTATTTGCTTATA Gene GeneID:534482|FSTL1:NM_001017950:74_cdna Constitutive 2 NULL GeneID:534482 1 GENE FSTL1 MGC137830 follistatin-like 1 EMBV3_09385 AATCCAGGAATGGGTGAGGCTGGGGACTTCAGTGGGAATAACTTCATACCAGCAAATGGC Gene GeneID:100297777|LOC100297777:XM_002691914:47_cdna Constitutive 0 NULL GeneID:100297777 12 GENE LOC100297777 NULL similar to replication protein A2, 32kDa EMBV3_31967 GGCTGGATGGTGAAAATAATGTGGAGGTCAGCAAGGGAAGTGGAGGAGAGGCCTGCAAAT Gene GeneID:618246|LOC618246:XM_002695226:7_cdna Constitutive 0 NULL GeneID:618246 18 GENE LOC618246 NULL similar to sialic acid binding Ig-like lectin 10 EMBV3_24977 GCTATGGGACAGGGGACTATTGATTGGAATGCTCCTAATTTAGTTTTTGGGGTCAGGCTT Gene GeneID:508405|ANKRD17:XM_002688348:134_cdna UTR3_Alt 2 NULL GeneID:508405 6 GENE ANKRD17 NULL ankyrin repeat domain 17 EMBV3_21801 ATACACCATTATCATGACTTTCCCAGATGCTGTGTTCATGGGACTCGTGACTGGGGCCAG Gene GeneID:100337301|LOC100337301:XM_002695252:229_cdna Constitutive 0 NULL GeneID:100337301 18 GENE LOC100337301 NULL vomeronasal 1 receptor 1-like EMBV3_04308 CTGTCAGTGAGGATGTTTTCCAGTATGAAGTGGCTGTGTTGGTTGGAGCAGGAATTGGGG Gene GeneID:521681|NOX1:XM_002699814:38_cdna Constitutive 0 NULL GeneID:521681 X GENE NOX1 NULL NADPH oxidase 1 EMBV3_37421 CGCCCGGAACAGGCTTCTGCAGGGCTTGAGCCAAGGCCGCCGCGATGCCGCACTTCCTGG Variant GeneID:535121|LOC535121:XM_002687952:45_cdna 168^311 3 EMBV3_43148 GeneID:535121 5 GENE LOC535121 NULL similar to rCG60321 EMBV3_16751 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08626 AACCGTTCTAAGACTGCTTTGTATGTGACCCCCCTGGATCGAGTCACTGAGTTTGGAGGT Gene GeneID:539802|LOC539802:XM_002692512:9_cdna Constitutive 0 NULL GeneID:539802 14 GENE LOC539802 NULL similar to CGG triplet repeat-binding protein 1 (CGG-binding protein 1) (p20-CGGBP DNA-binding protein) (20 kDa CGG-binding protein) EMBV3_25837 GGATAGCTCAGGAGGAAAATACGGTGGAGAAAAGAGACTGAGTAGCTTGGTTTACGCGGG Gene BVV0102_383997 + 0 NULL GK000016.2:1-276632 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00223729 TCONS_00081496 TCONS_00085042 TCONS_00192189 TCONS_00063594 TCONS_00238581 TCONS_00223718 TCONS_00201908 TCONS_00201377 TCONS_00254827 TCONS_00163708 TCONS_00112239 TCONS_00151324 TCONS_00232656 TCONS_00223721 TCONS_00062709 TCONS_00184696 TCONS_00129429 TCONS_00187683 TCONS_00152803 TCONS_00048995 TCONS_00010220 TCONS_00054146 TCONS_00232666 TCONS_00060246 TCONS_00087333 TCONS_00232768 TCONS_00132066 TCONS_00048033 TCONS_00201906 TCONS_00199376 TCONS_00054100 TCONS_00201912 TCONS_00137160 TCONS_00201907 TCONS_00201910 TCONS_00063595 TCONS_00139971 TCONS_00152632 TCONS_00184695 TCONS_00200984 TCONS_00234164 TCONS_00015588 TCONS_00157094 TCONS_00207792 TCONS_00034471 TCONS_00152623 TCONS_00125029 TCONS_00112864 TCONS_00143669 TCONS_00154455 50 XLOC_137028 XLOC_050375 XLOC_051775 XLOC_117131 XLOC_038320 XLOC_145248 XLOC_137017 XLOC_123553 XLOC_123023 XLOC_157759 XLOC_100000 XLOC_068136 XLOC_092086 XLOC_142141 XLOC_137020 XLOC_037436 XLOC_111408 XLOC_078142 XLOC_113728 XLOC_092568 XLOC_029126 XLOC_005772 XLOC_031955 XLOC_142151 XLOC_036632 XLOC_052448 XLOC_142252 XLOC_080699 XLOC_028165 XLOC_123551 XLOC_121029 XLOC_031909 XLOC_123557 XLOC_083370 XLOC_123552 XLOC_123555 XLOC_038321 XLOC_085033 XLOC_092397 XLOC_122634 XLOC_143643 XLOC_008519 XLOC_095554 XLOC_126307 XLOC_020687 XLOC_092388 XLOC_076571 XLOC_068759 XLOC_088090 XLOC_094215 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_05902 CACACTCAGCCCCTACACCAAGTACTCGCTCATGATCAACCGGGCCACACCCTACAACTA Gene GeneID:338064|NDUFA3:NM_176659:16_cdna Constitutive 1 NULL GeneID:338064 18 GENE NDUFA3 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa EMBV3_39900 TACACCCTCCAGGAAGTGCAGGTCGGGATCATAAACACCACCATGTGTAATCACCTGTTC Gene GeneID:528479|PRSS21:XM_002697864:374_cdna Constitutive 0 NULL GeneID:528479 25 GENE PRSS21 NULL protease, serine, 21 (testisin) EMBV3_18190 AGATTCTTTACCGGCCGAGCCACAGGGGAAGGCCTGAGAGACAATAAGAACTGACTCTAA Gene BVT0102_131828 - 0 NULL GK000007.2:97505381-97622777 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218133 1 XLOC_131631 Coding TCONS_00218133 XLOC_131631 Coding Coding GLRX 7:97498426-97543841 j TSS162249 3816 2 TCONS_00218133_8 134 0.220125786163522 6 0.916105165807901 4.74305773800408e-05 0.000409014569450455 2.25220972123424e-05 2.85478828360451e-05 4.23871110733953e-05 4.51791571634719e-12 3.1095369081379e-05 2.01314798384072e-05 0.000123095769721244 1.61097206335875e-06 3.61020984038406e-06 8.13679223730422e-41 5.50235745461391e-07 3.26028913672807e-31 5.02706264178661e-05 0.00153582644453362 0.00150689716774722 0.00105352328586961 0.000149607813384376 4.27155747133045e-05 1.47200381036966e-05 0.000368234725981647 0.000496869278602407 0.000846533320328285 0.000130600172209647 5.39534468711432e-05 9.0965415802162e-06 0.000159822523352581 9.94041367138975e-05 0.000132802738174121 NM_001037604.2 GLRX Bos taurus glutaredoxin (thioltransferase) (GLRX), mRNA. 0.0 2755 99.74 0.402777777777778 NM_002064.2 GLRX Homo sapiens glutaredoxin (thioltransferase) (GLRX), transcript 4e-114 417 76.87 0.150681341719078 TCONS_00218133_8 sp|P10575|GLRX1_BOVIN GLRX1_BOVIN Glutaredoxin-1; 9e-74 219 100.00 0.783582089552239 1 noncoding 0 0 0 0 -1.44385469316147 0.00955675786538348 -0.0511861791831906 0.483563598005648 GGACCCTCCGGCGGGTGAGCCCTGAGGAGACCCTGGGCTTCAGGGAGGCGCCTGGCTGCAGGAGTCCAAGCGCAAAGAAGGGGATGGAGACAGACGACAAGGACTCTGCTGGGAGCTTATTCCAGAGAGAACGAAGCTGTGGGCTGGGAAGTCCCAAGCCTGACAAGAACCAGTCGCCTCAGCCCTCATGCCCGTAGCACATTCTTTCCAGGGACAGAGACATCACTTAGAGTCCCTCTCTGTGACTCAGTCCGGGTTTCTGTTTGGCCACTTAATTTTAGGAATAATGACAGCTGCTTCCAAGAGTCCATTTTCTTTCCTTCTCTCATAGTCATGCTATGCTTGGGACTCTGACGTGACAATCACTGAGTGTACAGCTCCGGCCTGCGGCCCGAGTTTCAGTGTAAAACTTCCTGGGGGAAAAGGAGAGTCCACTTTTAGAGGAGGTGCTTGTCCCTGTTTTGTTTAACTTACCACACAGAGAGGTCAGAACTGGCCCTAGAACAAAGGGAGCGTGGGCCCACAGGACATAGCAGCAGGTCTACAATGTGTCGTAACACTCAGGTGAATGTGAAGTAAGTGAGATATTACACCACTCAGACTCGCAAACAGTGACAACAGCTGGCATCTGGTCCCATCACTGCATGGCAAACTGATGGGGAAACAATGGAAACAGTGAGAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGGTGACTGCAGCCATGAAATTAAAAGACGCTTGCTCCTTGGAAGAAAAGCTATAACCAACCTAGAGAGCATATTAAAAAGCAGAGACGTTACTTTGCCAACAAAGGTCCATCTAGTCAAGGCTATGGTTTTTCCAGTGGTCACGTATGGATGTGAGAGTTGGACTGTGAAGAAGACTGAGCGCCAAAGAATTGATGCTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAGATCAGTCCTGAATATTCATTGGAAGGACTGATGTTGAAGCTGAAACTCCAATACTTTGGCCACTTGATGTGAAGAGCCAACTCATTGGAAAAGACCCTGATGCTAGGAAAGATTGAAGGCAGGAGGAGAAGGGGTCGACAAGGATGAGATGGTTGGATGGCATCACCGACTCAACGGACATGAGTTTGAGTAAAGTTGCTGATGGACAGGGAGGCCTGGCATGCTGCAGTCCATGGGGTCACAAAGAGTCGGACACAACTGAGCGACTGAACTGAACACCATTCAGACTCACAAACAGTGACAACAAAGGGATCAAACAGAGAAAAAGACCCTCACTGGATCTGCAGTTTGAAATTAGGGTTTGTGCTGGAATTTGCCTCCATGCTAAACTGCTGTTCAAGGGTCACAAACTCAAAAGCTTATGGATGAAGAGCGGGTATCTGGAAGGCGTGAGCCAGCCGGGAGCCAGCTTCTGCTCCCTCCAAAGGACCACCACACCTCAGCCCCAGCTGCTGCCTCTCATGAAGGTGACCTGACTTTTCGGGGAGAGGCCGCAGGGCCAGATTCTTCTGTGCAATCTCCAGATGTTTGAAGGTGGGGGAGCAATTCCATTAAACAGTGACAACAAGCAGGGCAGGCAAGATGAGATGCAAAGTCACAATCTGAATTTCACTTCTAAATAGATTTCAGTCTATTCTGCATCTTGAATGATTCTGTGTGTGTTTTTAGAAACCGTGTCTCTGAGAGACAATAAGTGAAGTGAAAGTGGCTCAGTCCTGACTCTTTGTGACCCCAAGGAGTATGCAGTCCACGGAATTCTCCAGGCCAGAATACTAGAGTGGGTAGCCCTTCCCTTCGCTGTTCTCTTCTCCAAGGGATCTTCCCAACCCAGGGATCGAACCCAGGTCTACCTACATTGCAAGCAGATTCTTTACCGGCCGAGCCACAGGGGAAGGCCTGAGAGACAATAAGAACTGACTCTAAGAGGTGCCTGCCTGCCTGCTGGGGCTCCCTCCCTGGAGCTGGTCTGCACCTTTCAAGCTTCTCCAGAGAGTGAGCTGGCTCTGTTTTCTTCTCCAGAGCGGGTGCCCCTGAAAGGGCTGGACAATGACACCCCAGGATGTAGCTGTTCATGCTCCAAAGCTCTAGCCAGTGCATCGCTCCAAACTGAAATGACTTTCAGGGCTGGCCCTTTAAAAATCGAGCACGCCGCGGCGGCAAACTCCTCCTCCAGGGAGGTTCCTTTAAATGAGAGCCAGCTGGTCGGTCAGCCGCAGCTTTTACTTTCAAGCTCTACCTACAGTGGAGGTGTACCCCCCGGAGGGAGGCAGCATGGCTCAAGCGTTCGTCAACAGCAAGATCCAGCCTGGGAAGGTGGTCGTGTTCATCAAGCCCACCTGCCCCTACTGCAGAAAGACTCAGGAGCTTCTCAGCCAACTGCCCTTCAAACAAGGGCTTTTGGAATTTGTCGATATTACAGCCGCCGGTAACATCAGTGAGATTCAAGATTACTTGCAGCAGCTCACCGGAGCCAGAACGGTACCTCGGGTCTTCATCGGTCAAGAGTGCATAGGTGGATGCACAGATCTAGTAAATATGCACGAGAGAGGGGAACTGTTGACACGGCTAAAGCAAATGGGAGCTCTGCAATAATTACAGCAGAGCAGACCCAGGCTGATATCCCCCCTTGGGGATAGGATGGCATTGCAGATAATGACAGCAGTTCCTGGAGGATGGACCTGGGGTGACTGTACCCAGTTACAGCAACTGTTTACTTAAAATTCTGAAATATTTTAACTGCAATAAATGGGGAAGGGAAGTCAACGGCTTCTTTTGACTCAGTATTAAAAATGGACCAACTTGCCCAAAATAACAGGTCTGACGGATGTCTCGGGTTTCTTGTGGACTGGCCCTTTGGGTTCCCAGGGACCATGACAAGATATGCTTAGGATTCACTCACTGACCCAAAAGATGATCCTTCTCTTTGGCACATGTTCTTACCAAGGGTCTCTTCTGAGCTGGGCTGCCTCTACCTCTAACGCCTGTATTTCTCAACCAAGTGTATCTCAGGCCCCCAAGCACGAAGCTAGAGTTGGTTTTCTGCTACTGCTTGGAAATTATTTTGTTGAGTTTGACTTCCTAGAATTTGTATTATGAAATCAACAGGCATTTTGAATGTGCTTTTTCAAAAGGTGTCTTCCCAGGCCACCATCTCCACCCCACCCCATCCCTTTCTGCTTTGAAAGTCACTGCTGTGAACCACTGCCCTGAACCCTGACAACTCACAGATTCACAGGAAATGTTCGACGGTTCTGTCTGTCTGTCTCTCAATCCGAGAGAAACCACATGAAAAGTTAAGCACAGTTGGTCTTCACTTTGTGCTACAGGGATCAGAGGTCTAAATGTAGGTGCGGTGATCATACGGCAACGCTGTTAGGTCAGACGGTGTCCAGGGAATCCTGGACAAGCATATATTGTTTAGATGACACACAGAAGGAACACACAAACATTTAAATGTTACGCAGAAAACCTGCATCCCCCTCCCGCAAAAAATGTCTGTGAAAACAGCCAAATTTGGGAAACACTGTTCTGGATGATTTTCTCTCTCCCCTTCTCCCCCCTCACTCTATGAGAACTTAAGAATTCCTTATTGTGAAGGATTCTAGAATTGCAAGAATGTTAATTTCTTTCTGTAGATGCAAGTATGAATGGTTAATTTCTTCTCTATTAAAGAAGTACTCATGGATCATACACTGATTTTTGCCCAATTCATCATTCTCAAGAATGGAAAATGGTATTTATTTTTCATATCCATCTCCCC EMBV3_28530 CGTCCTCAACCTGGTGGAGCTGGCCTACCTGGGCGATCTCCTCTCAGGCGACCTCATCTT Variant GeneID:524030|GJB5:XM_002686488:576_cdna 770^865 2 EMBV3_37302 GeneID:524030 3 GENE GJB5 NULL gap junction protein, beta 5, 31.1kDa EMBV3_17247 AGAGGGCTGTCTGACCTTACTTGCTGACCTTCTCGCCCAGGAGCCATATGTGCCCACCTA Gene BVV0102_013775 + 1 EMBV3_02689 GK000021.2:70984395-70997329 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01021 GGTTAGGGGAGCTTATGTCTGTTCTGGTGGGTGAAGCTGAATGTCTTCTATCTGGAGTGC Gene BVV0101_085828 + 0 NULL GK000015.2:1716776-1732080 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05073 TTCCCATTAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGC Gene BVV0102_300511 + 0 NULL GK000007.2:9123196-9168856 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208613 TCONS_00022579 TCONS_00141133 TCONS_00249774 TCONS_00214738 TCONS_00249013 TCONS_00115729 TCONS_00137809 TCONS_00220662 TCONS_00066215 TCONS_00117267 TCONS_00018898 TCONS_00187806 TCONS_00135528 TCONS_00238846 TCONS_00040555 TCONS_00252354 TCONS_00019990 TCONS_00231337 TCONS_00175866 TCONS_00253888 TCONS_00189889 TCONS_00157441 TCONS_00210523 TCONS_00186454 TCONS_00244654 TCONS_00187583 TCONS_00233691 TCONS_00091802 TCONS_00206862 TCONS_00231021 TCONS_00189806 TCONS_00152647 TCONS_00056970 TCONS_00148253 TCONS_00230725 TCONS_00233597 TCONS_00148670 TCONS_00062742 TCONS_00117462 TCONS_00186109 TCONS_00019962 TCONS_00210174 TCONS_00207846 TCONS_00089139 TCONS_00248778 TCONS_00250939 TCONS_00232966 TCONS_00245928 TCONS_00141532 TCONS_00088086 TCONS_00020011 TCONS_00122032 TCONS_00008700 TCONS_00064058 TCONS_00238893 TCONS_00239411 TCONS_00244651 TCONS_00008117 TCONS_00090003 TCONS_00038382 TCONS_00040697 TCONS_00233559 TCONS_00240534 TCONS_00238308 TCONS_00161836 TCONS_00107533 TCONS_00199627 TCONS_00241574 TCONS_00187594 TCONS_00107833 TCONS_00160965 TCONS_00152860 TCONS_00141330 TCONS_00250590 TCONS_00238427 TCONS_00207578 TCONS_00251916 TCONS_00185887 TCONS_00020016 TCONS_00210648 TCONS_00055303 TCONS_00232347 TCONS_00090399 TCONS_00251994 TCONS_00070809 TCONS_00160991 TCONS_00210178 TCONS_00017462 TCONS_00244653 TCONS_00253720 TCONS_00207754 TCONS_00230096 TCONS_00250306 TCONS_00135548 TCONS_00222057 TCONS_00056147 TCONS_00021194 TCONS_00238446 TCONS_00019991 TCONS_00177715 TCONS_00198434 TCONS_00175849 TCONS_00019197 TCONS_00224114 TCONS_00036946 TCONS_00100747 TCONS_00020022 TCONS_00037883 TCONS_00198661 108 XLOC_127126 XLOC_013249 XLOC_085561 XLOC_152717 XLOC_130757 XLOC_151956 XLOC_069898 XLOC_084019 XLOC_133979 XLOC_040929 XLOC_071433 XLOC_009579 XLOC_113849 XLOC_081751 XLOC_145512 XLOC_024371 XLOC_155295 XLOC_010668 XLOC_140826 XLOC_105645 XLOC_156826 XLOC_115926 XLOC_095896 XLOC_129033 XLOC_112506 XLOC_150512 XLOC_113628 XLOC_143172 XLOC_056573 XLOC_125382 XLOC_140510 XLOC_115843 XLOC_092412 XLOC_034773 XLOC_090135 XLOC_140215 XLOC_143079 XLOC_090550 XLOC_037469 XLOC_071628 XLOC_112162 XLOC_010640 XLOC_128684 XLOC_126361 XLOC_053925 XLOC_151721 XLOC_153882 XLOC_142448 XLOC_150855 XLOC_085960 XLOC_052873 XLOC_010689 XLOC_073588 XLOC_004257 XLOC_038784 XLOC_145559 XLOC_146077 XLOC_003677 XLOC_054784 XLOC_022207 XLOC_024513 XLOC_143041 XLOC_147198 XLOC_144975 XLOC_098721 XLOC_063443 XLOC_121280 XLOC_148238 XLOC_113639 XLOC_063743 XLOC_097858 XLOC_092625 XLOC_085758 XLOC_153533 XLOC_145094 XLOC_126093 XLOC_154857 XLOC_111940 XLOC_010694 XLOC_129158 XLOC_033111 XLOC_141832 XLOC_055180 XLOC_154935 XLOC_042586 XLOC_097884 XLOC_128688 XLOC_009039 XLOC_156659 XLOC_126269 XLOC_139588 XLOC_153249 XLOC_081771 XLOC_135366 XLOC_033950 XLOC_011867 XLOC_145113 XLOC_010669 XLOC_107488 XLOC_120088 XLOC_105628 XLOC_009877 XLOC_137410 XLOC_021259 XLOC_060989 XLOC_010700 XLOC_021712 XLOC_120315 Coding TCONS_00222057 XLOC_135366 Coding Coding - 7:70682995-70686837 - TSS166055 3842 2 TCONS_00222057_5 115 0.997917751171265 1 0 5.05901659931964e-07 4.79493141964255e-06 0 0 5.71135386159485e-07 1.33005749818789e-07 0 1.71054331302813e-07 1.30064629441795e-06 1.07092175724304e-06 1.48958039000441e-07 4.13638474427097e-06 0 2.44871816558218e-07 1.59623789052634e-07 0.00332700385437757 0.000192296171611 0.00859026605852141 1.86645827677117e-06 1.07770000193695e-05 6.58452760786576e-07 0.000464821333825734 0.000262264095623234 0.000504714169171867 5.63546402276529e-06 1.83380325625921e-06 1.6944788577739e-06 4.58341979923324e-06 6.31781897174857e-06 2.73853284638068e-06 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-114 417 93.48 0.0715773034877668 TCONS_00222057_9 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 2e-22 90.9 45.26 0.92156862745098 1 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 CCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGAGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGGATGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCCTGGGGTCGCAAAGAGTTGGACACACTGAGCGACTGAACTGAACTGAACTGAAGACATCACCAGACCCACTCACAGAACAAAGGACTGAGCAGAACTAGCCAGCTGTGGATGGGCCCATCCCCCACCGGAGACAAGCAGGGGAGGGCAGCCAGAGCCGGAAGGGGGCAATCTCGACCTCAGAGAGGCATCCTCTACCAAACTGCAAGCAGGCTTCACTGCTAACCAAGACTTCTTGGGATTCTGGATGGTCAATCCACTGGGAGGATCACAACCAGAGATCAGCCTCCCAGAAGAGACACACAGATCACCTGAGAAGGCGCGGCCGCTGTACACCCAGAACACCGAGCGCCGGACGGGGAGGCCATAAGACACAGCCTCCAACAGGGGGTGGGGGACTGTACTCACCAAACACCTGGTCACCTGAGCTGCTCGGACCTGGGAAGGGCACAAAATGCAGGCCCAACCAAGTCTGAGCCTTTGTGGACTACCCGAGAGCCTGAACCTGAGCGGCTTAGACCTGGGCAGTGCATGCAACCCAGGGCCTGCCACAGACAGTTCCCCGCAGAGCAACCTAGAGCCTGAGCAGTGTAGACTGGGAAAGCACACACGCCGTGAGCAGGGGCAAACCTGGTGTGGCCGAGACACTGCGAGCACTCCCCACACATGCCAGTGATATTTGTTTGCAGTGTTCCTCCCTCCCCACAGCACGATTGAACAAGTGAGCCTAAGAAAAGTGACCTCCACCAGCCCCTTGTGTCAGGGCGGAAATTAGACACTGAAGAGACCAGCAAACAGAAGAAGCTAAAATAAACAGAAGGAACCGCTTTGGAAGTGAGAGGTGCAATAGATTAAAACCCTGTAGTTAACACCGACTACATAGGAAGGGGCCTATAGATCTTGAAGAACTATAAGCCAGAGCGAGGAACTATCTGAAAATGAACTGCCCCAAACTGTCTGCAACAGCTCCAGAGAAAGTCCTAGATATATTTTTTACTATTATCATTTTATAAATTTTCATAAAATTTTTTATATTTTTAAGTCCTATATTACTCCTTTAATTTTTATTTTTATAACCTACTACTACTACTACTCAGTCGCTTCAGTCATGTCCGATTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATTGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTATAACCTACTATTACCTTGCAAAAAAAAAAAAAAAAAAAAAAGACCCTATTTTTAAAGCAAACTTCATATATATCTATATATTTTTTATAATTTTGTGACTTTGTTTTGTTTTTTTTAATATTGTATTTTTGAGAATCTAACCTCTACTCTAGATTTTTAATCTTTGCTTTTTGGTATTTGTTATCAATTTTGTACATTTAAGAACCCAATCTTCAGTACCCATTTTTACTTGGGAGTGAGATTACTGGCCTGATTGCTGTCTCCCCCTTTTGACTCTTCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCCTTCTCTTCTCTACCCAACTCTATGAATCTCTTTGTGTGTTCCAGGCTGTGGAGAACACTTAGGGAACTGATGACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCGCCTATTATCCTCCTGGCTACCTCTGTCTCTCTCCTTTTGATTCCACCTATTATCCTTCTGACTACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCATGAACATCTCTGAGGGATCCAGACTGTGGAGAACACATAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCCCTTTTGATTCCCACTCTTCTCCAAACCCACTGACATCTCAAAACTCACTACTGGACACTTCATTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAGCACTGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCCATCCAACCCCACCCACAGTGAGGAACCTCCAAAATAAAAAGGAACCACAAACTGCCAGAATATGGAAAGGCCACCCCAAACACAGCATTATAAACAAGATGAAATGGCAGAAAAATACTCATCAGGTAAAGGAACAGGATAAATGCCCATCAAACTAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAAATGACCCAAAATCTTGAAAACAAAACGGAGTCACAGATAAGTAGCCTGGAGACAAGGATTGGGAATATGCAACAAATGTTGAACAAGGACCTAGAAGAAATAAAAGAGACAATATATAATGAATAATGCAATAAATGAGATCAAAACCCTCTGGAGGGAACCAACAGTAGAATAATGGAAGCAGAAGATAGGATAAATGAGGTAGAAGGAGTGTTAGAAATAAATGAAACAGAGAGGAAAAAAGAATTAAAAGAAATGAGGACAAACTCAGAGACCTCTGGGACAATGTTAAACAACCCAACATTCGAATCATAGGAGTCCCAGAAGAAGAAGACAAACAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAGTCACCCAAGTCCAAGAAACCCAGAGAGTCCTAAACAGGGTAAACCCAAAGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAGTATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGAAGGGAATGGCAGGACATACTTAAAGTGATGAAAAAGGAAAAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCACTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAGAAAGGGTGTATAAACTCAAACCCAAAACAACAAAGTAAACGGCATTGGGATCATACTTATCAATAATTACCTTAAATGAAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAAAAACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGTGATGGAAAAAGATATTCCATGCAAATAGAGACCAAAAGAAAGCAGGAATAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAGGAAACAAAGAAGGATACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACATAGGACCACCACACTATGTAAGACAAATGCTAACAAGTATGAAAGGGAAATTAACAGTAACACAATAATAGAGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAAATAAACAGAAAAT TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 24667 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 28508 EMBV3_27211 TACCTTAGTGTAAATGGATGTCATGTTACAGTGCTGCCGAAACTCTTAGGGGAGAGAGCG Gene GeneID:525628|DIAPH3:XM_002691734:32_cdna UTR3_Alt 2 NULL GeneID:525628 12 GENE DIAPH3 NULL diaphanous homolog 3 (Drosophila) EMBV3_13392 CTTAAAAATCTTAAGAATAATTGAAGTTATGGTATATGGTGTATCTTATAGTATCTATTA Gene GeneID:533077|PEX7:NM_001076890:29_cdna Constitutive 3 NULL GeneID:533077 9 GENE PEX7 MGC143449 peroxisomal biogenesis factor 7 EMBV3_02992 CCTGTTCTCACCTCTGCCTCTTACTTGATTAGTCTGTTCCTCTCCTATGTGTCTCAACCT Gene GeneID:539463|ZKSCAN2:XM_002698002:103_cdna Constitutive 2 NULL GeneID:539463 25 GENE ZKSCAN2 NULL zinc finger with KRAB and SCAN domains 2 EMBV3_35074 AGCCAGACTAAAATTTGTAGAACATTAGAGTGTTCTCTGTCAAGCTGAGGTGGTTTAGGA Gene GeneID:508731|ZMYM2:NM_001101907:31_cdna Constitutive 2 NULL GeneID:508731 12 GENE ZMYM2 MGC165807 zinc finger, MYM-type 2 EMBV3_35165 AGAAGTGCATTGGGTGGTATTTCCCATGGTATCCAGGCCCCACGAAGTCCAGAGGGTATT Gene GeneID:785404|SH3BGRL2:NM_001083791:8_cdna Constitutive 1 NULL GeneID:785404 9 GENE SH3BGRL2 MGC139020 SH3 domain binding glutamic acid-rich protein like 2 EMBV3_36592 CTGAGCATGGATGAAGTTTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTG Gene GeneID:537907|ST5:NM_001098093:181_cdna Constitutive 0 NULL GeneID:537907 15 GENE ST5 MGC139033 suppression of tumorigenicity 5 EMBV3_08070 ATCAACCCCATCACGCTCAAGAGGTGGCTGGAGAAGTTTTCGCAAATGGACATCCTGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04457 GCTACAATCTTTCATACAGTTGCTTCATTTGAAGAGGCTTTTAAAATGTGTACAAACAAG Gene GeneID:281161|FGF2:NM_174056:8_cdna Constitutive 1 NULL GeneID:281161 17 GENE FGF2 NULL fibroblast growth factor 2 (basic) EMBV3_03403 ATGGCTTCTCCTGACCTGCACGGAGACAGAGACTGCTCCAGCACCACTGGTCCTCGGAAA Gene GeneID:521040|RGS11:XM_002683811:35_cdna Constitutive 0 NULL GeneID:521040 25 GENE RGS11 MGC139468 regulator of G-protein signaling 11 EMBV3_39854 TGGTTAACTAAAGCAGAGATGAAGCTGCGGCTAACTTTGCGAACCTCTCGTGGGAGCGTC Gene GeneID:505016|LAT2:NM_001075183:80_cdna Constitutive 0 NULL GeneID:505016 25 GENE LAT2 MGC139435 linker for activation of T cells family, member 2 EMBV3_36358 TCAGCCTCACTGAGACACAGGTCAAAATTTGGTTCCAGAACCGCAGGACCAAGTGGAAGA Gene GeneID:617982|NKX1-2:XM_002707789:147_cdna Constitutive 0 NULL GeneID:617982 26 GENE NKX1-2 NULL NK1 homeobox 2 EMBV3_26440 AGTACCTGAAGGTGGTGATGGCCCTCCAGTACGAGGAGAAGCCGCCCTACTCCACACTGA Gene GeneID:520302|VRK3:NM_001046251:256_cdna Constitutive 2 NULL GeneID:520302 18 GENE VRK3 MGC133825 vaccinia related kinase 3 EMBV3_29185 GGATTTCCAGCTGTTTTGTACCTGCCTGTCTGAGTGATGATACAGTTCCTAGACCCAAGG Gene BVV0102_026456 + 1 EMBV3_42528 GK000024.2:43920135-43927641 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02098 GCTGAGTCTTACGAGAATGAAGATGAAGAACTGGCCCCTACCGTCACCAGGACAACAGAC Gene GeneID:100298507|LOC100298507:XM_002698083:92_cdna Constitutive 0 NULL GeneID:100298507 25 GENE LOC100298507 NULL hypothetical protein LOC100298507 EMBV3_22530 TCTTGTCTGCTTTGGATCTCGCAGCCTGGGCTTCCTGGTTGGGAACGATGGCAGGGTGTA Variant GeneID:532575|PGLYRP3:XM_002686004:373_cdna 50^350 1 EMBV3_40987 GeneID:532575 3 GENE PGLYRP3 NULL peptidoglycan recognition protein 3 EMBV3_14888 ACCAAACAGCTGCTGATGCTTTCAGATGAGTTGATCCACCTTCCTCACCTCCAGTGGGAA Gene BVT0102_249603 + 0 NULL GK000019.2:45713522-45719163 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097320 TCONS_00097317 TCONS_00097319 TCONS_00097316 TCONS_00097318 1 XLOC_058221 Coding TCONS_00097318 XLOC_058221 Coding Coding PLEKHM1 19:45717602-45774065 j TSS72136 5361 1 TCONS_00097318_5 1033 12 0.905263717190323 0.00338546408686274 0.000168128624802707 0.00120545040646025 0.000812274473825753 0.000710553276497483 0.000273340546590393 0.000170429036574311 4.77617588650517e-08 0.000239708242037607 8.02031113824149e-05 3.79255446664903e-05 7.39857144213893e-05 8.6039512039898e-05 6.58527143950711e-22 2.94829686968172e-09 0.00182059127109942 6.20096171704179e-07 1.57052407601638e-14 0.000975197287806416 0.00135643341617289 0.000679240751889042 4.05366697175617e-22 0.000672166014536611 0.000195834233209615 0.00121794173880075 0.00114073312167935 0.00188971983678434 1.51963738468857e-09 0.00024695231197545 7.7897023239087e-14 XM_002696082.3 PLEKHM1 PREDICTED: Bos taurus pleckstrin homology domain containing, family M (with RUN domain) member 1 (PLEKHM1), mRNA. 0.0 4875 100.00 0.504010445812348 NM_014798.2 PLEKHM1 Homo sapiens pleckstrin homology domain containing, family M (with RUN domain) member 1 (PLEKHM1), transcript variant 1, mRNA. 0.0 2987 83.31 0.527140458869614 TCONS_00097318_5 sp|Q9Y4G2|PKHM1_HUMAN PKHM1_HUMAN Pleckstrin homology domain-containing family M member 1; 0.0 1655 78.81 0.996127783155857 2 coding 0 0 0 0 -0.148026942166961 0.196419164054733 -0.0070992891493009 0.891644192748104 AGCTGACGTGACGGCGTCAGGCGCCGCGGGAGCCGCTTCCTGTTGTCAGTGGCCGGGAGGCCGCGGCGTCCCATCCGAGGCTTACGGGCTGCAGCGGCTGGCAGTGCCCCCGCCCCCTCGCTTCTCCCTTCGGTGTCATGTGATTCTCCTGGGGAGCTGCTGCTGGAGTGGAAATGCTCTCAGGGGTGGAGAATGGACTGGACCCCCGGGCTGCCATCCCGGTCATCAAGAAGAAGCTAGTGGGCTCCGTGAAGGCGCTGCAGAAGCAGTATGTGTCCTCAGACACGGTGGTCACGAGCGAAGATGGAGATGCCAACACCATGTGCAGCGCCCTGGAGGCCGTCTTCATCCACGGCCTGCACGCCAAGCACATCCGCGCCGAGGCCGGAGGGAAGAGGAAAAAAGGCGCCCACCAGAAGCCTCTGCCTCAGCCCGTCTTCTGGCCTCTCCTGAAAGCTGTCACCCACAAACACATCATCTCGGAGTTGGAGCACCTGATCTTTGTGAGCACGGACGTGGGCCGCTGCCGGGCCTGGCTGCGGCTGGCCCTCAACGACGGCCTGATGGAGTGCTACCTGAAGCTGCTGCTACAGGAGAAGGCCCGCCTGTGCGAGTACTACCAGCCCACGGCCCTGCTCCGCGACGCCGAGGAGGGCGAGTTCCTCCTGAGCTTCCTTCAGGGCCTGACGTCCCTATCCTTTGAGCTCTCCTACAAGTCTGCCATCCTTAACGAGTGGACGCTCACCCCGCTGGCCCTCTCGGGGCTCTGCCCGCTCTCAGAGCTCGACCCCCTCACTATCCCTGGAGCTCAACTGCAGCGGAAGGAGTCTCTGGACTCCATCTCCCATTCCTCGGGCTCAGAGGACATCGAGGTCCAGCACTCAGGCCACAAGATCCGACGGAACCGGCAGCTCACCGCCTCCTCCCTCAGCCTGGACACGGCCAGTTCATCCCAGCTCTCCTGCAGCCTCAACTCTGACAGCTGCCTCCTCCAAGAGAATGGCTCCAAGAGTCCAGACCGTTCCGAGGAGCCCATGTCCTATGACTCAGACCTGGGGATGGCCAATGCCGACGACTCGGACATGTCTCTGCAAGAGGTGTTGTCGGAATTCAGCAAAGCCCAGGTAAACTCTGTGCCAGCCAATGGACCGATCCGAGAAACGGAGGTTCCCACGCTGCAGGCCCCGCTCCCCTTCCCTGGCCTCAACACCAGCACGTCCCTGCACTCAGAGGAAACAGCAGAGCCCCGCCATGCCCAGGCCTCCCCTGGAACTGGAGATGGGGACCACAAGCGGGAGCCGCTTGCCCAGGCGCCCAGCCCCCTGGGCTGGCCGCAGCCGGGCCCTGCCCAAGCTGTCCTTTCGGGGAGTGCTTCAGGCCAGCAGCCTCCTTGTCCCGTGAGAGACGCCACCAGAGCAGCCAGCCAGGAAAGCGGCCAGCAGAAGCCCCCGGAGGATAGCGGACCTCGGCTCAGTCTTGCGGTTCCCTCCCCCACCAGTCCGAAAAGCAAGAGCTGGATCTCAGAAGATGACTTCTACCGGCCTCCCCGGGAACAGCCCAGACAGAGTCCTTCTGATGCCGCCACAGCTTCTCCCAGAGAGATTCCTGAGTCAAGGCCTGGCCTCCTCGTGCAAGAACCAAGACGAAGCTGCTCCATGGAGGCCTTAGACAAAGCTTGCGCACCTTCCCCAGGAAGCGGGAGAAACACGGCCGCCCTGCCACCGCCGGAACACAGGAACTTCAGGGTGGTGCATCGACGGCAGATGGGGCTGTCCAACCCATTCCGGGGGCTCCTGAAGCTGGGCACGGTGGAGCGGCGGGGGGCCATGGGAATCTGGAAGGAATTCTTCTGCGAGCTCTCCCCACTGGAGTTGCGCCTCTTCCTGAGCGGCAAGGAGCGCACCTGCGTGGAGACCTGCTCACTGCTGCGCTGCGAGTCCGTGGGGCCGGCCCACAGCGACGGCCGCTTCGAGCTGCTCTTCTCTGGCAAGAAGCTGACCCTGCGCACCTCGTCCCGGGATGAAGCCGAGGACTGGCTGGACCGGGTGCGCGAGGTGCTGCAGAAGTGCCGGCCCCTACAGGAGGACGACTGGGTGACCATCCAGTACCCAGAGGAGCCCGAGGACCCCCCAGAGGTCCCCCAGGGTGGCCACCCCGCCCCCTCAGACCTGCACATAGAGGCTGAAACCCCCCAGGGCCCGCAGTTCAACTGGTCCTTCTCCCAGGTGCCTGAGCCCGACGCTATCAAAGAGTCCCTTCTCTACCTGTACACGGACCGCACGTGGACGCCCTACATCTTCTCCCTGTCCTTGGAGTCCCTCAAGTGCTTCCGCGTGAGAAACAACGAGAAGATGTTAAGTGACAGCCACGGAGTCGAGACCATCCGCGATATCCTGCCGGACACGAGCCTCGGGGGCCCAGCCTTCTTCAAAATCATTACGGCCAAGGCCATCCTGAAGCTGCAGGCCGGGAATGCCGAGGAGGCTGCCCTGTGGAGGGACATGCTACGCAAGGTCCTGGCGTCCTACCTGGAGACGGCCGAGGAGGCGGTGACCCTCGGTGGCAGTCTGGATGAAAGCTGTCAGGAGGTGCTGAAGTTTGCCACGCGGGAGAACGGCTTCCTGTTGCAGTACCTGGTGGCCATCCCCACAGAGAAAGGCCTCGACTCCCAGGGCTGCTTCTGTGCAGGCTGCTCCCGGCAGATCGGCTTCTCATTTGTGCGACCCAAGCTCTGTGCCTTCTCTGGCCTCTATTACTGTGACATCTGCCATCAAGACGATGTCTCAGTGATCCCGGCCAGGATCATCCACAACTGGGACCTCACCAAGCGCCTGCCGAAGCTGCTGAGGAGTTTTGAGCATAGGATGGTCACACTCCCTGAAGACCAGTTTGGCAGCACAGCAGTGGGGCGTCGGGGCTGGTGTGGTAACTGGCACAGGAGGCTCAACCACAGGAATTATCTCTTGGAGTCGCCTCACAAGTACAGTGTCGCCGACCTCCAGCAGATCGCGGACGGGGTGTACGAAGGCTTCCTCAAGGCCCTGATCGAGTTTGCCTCCCAGCACGTCTACCACTGTGACCTGTGCACCCAGCGCGGCTTCATTTGCCAGATCTGCCACCACCATGACATCATCTTTCCCTTTGAGTTTGACACCACAGTCAGGTGCAGCGAATGCAAGACCGTCTTCCACCAGACCTGCCAGGCCGTGGTCCAGAAGGGCTGCCCCCGCTGTGCCCGCAGGCGCAAATACCAGGAGCAGAACAGTCTCACCTAATCCCACCTCTTGTCCCCACCCGGGACCCGGGGCTCAGCCATCCCAGCCGGGTTGGCCACCAGCCTGGCCACACTCTCAAGGTGTCACAGAGCCAGGAAGACTCTCAGATGAGACCAGAGGACTGGCCTATGAGAGGGAGCCCCAGGAGCCCCTGATGACACCTCCTATCCCCCAACTATCTGCTCCAGGAGGCGCGGACACCAGCAGGTGCCCCCTGTCCGACGGTGTGGGAGGAGGGGGCCTTTGCACTAATCAGCCCAGCACCCCTCACTGACACCCCATCCCCATGAGGGCTGTTCAACACTGTGGAAACAAGACTTGGGGAGCATTTTCAATTCCACATTCCTGATTAAAAGGTCTAGTTTTTTTAAGGTGGATTTTTTTCCCTTCATATTTCGACAGAAAATATTTTTTTATTCTTGACCCTCCACAAGTCACCCAAGAAATCCAGGCATTCTCACCCTGAGCAAATGTGTAGAAACCGCTCAGGCCCAGCCTGGAGGTGGGTGGTGGCTGGGTGGACAGGCCCCCCAGGACAGAGCCCACCAGCTGGCGGGTGCCTTTCCTTCGCCCTCACCGGGCGCTTGCTGCTGACAGCTCCTGTACAACGTGCCAAACTGCCGTGGGCCAGGCAGGCTCAGTCCTGAGGACCACGTTCTTTCCCTTCCTCTGCCCCCACCTGCTCCCTGGTCCCCCCTCCACCTGAAAAGCCCTTCAATTTCTCTGTGTCAAAACCCACCCCCCACCCCTGCTGCGGCTCTCCTATGGCCTGGGATCTTGGGCCCGAAGGAGGAGGGCTATGACTCGGAACCAGCACTGTCAGCACTTTGAGCCTTCCTTGGTCCAGGGAAGGGTCGTCATCTAGCCCACCCCTCAGTCCTCTGCCCTCCTCACTCCTACCCCTGACTGGCAGCCAGATGGGCAGGGGGCTGCTGCAGACGCATTTCAGGAACACACCCCCGCCTGCCGGGCCTGCCGGGACCGAGGTAGGCTGGCTCCACACTGCCCCCAGCATCTTTCCACGAAGAGTGCCAGCCCTGCTGCGGAGATGCACAAGGACACGCAGGAGAAGCCACCTGTGGAAGGGTGCTCAGCCAGTCCATGAAGCCACGAGTTCACAGAGTTTTGCTGGACTAGCCCAGGAGGGCCGCTGCCAAGAGATTGGAACATTTCACTGGAACACGACTGCCTTTGGAGGGGATCTTCAGGTGGAGCCTGAAATTGTTTTCAAAGCGATATTTAGACCCTGGGGCTTCGGGGGGCATGATTTCTCTGTTGCCTCCCCACTTCTCCTGGACCCAGCAGGCCCCCCTCAGCCCTGGGACCCCCCTGACCATCTTCTCTGTGCTCAGCTGAGATAGGAGGCCTCAGGTAGATATCCACCTTCACTGTCAAGAGACAAACCCACTGCCACCTCTCCCTTGGGGTGATTCGGCTGCTGAGTCACCTGCCTAGCCCTGTGGAGCTGGATAAATTGTGCAATAGAGTGGAGGAGGTGGTGGGCGGGTCAGGGAAGGGGCTGTCACACAGCTTCTTTGTCCCCATCACAGAAGATGGTGCACACCTGTACCAAAGCCTCCTAAACCAGGAAGTGGGTCCTTAGCCCCACCCCCGCCCCCAGCCAGCATTAACGCTCCACCAGAAACACAGCCTGATCAGAGCCAGAATTGGTGGTCCTGGGGTGGGCAGCACTGCTTGAGCCCAGCCCTGTGAGTGTATTCTGTATCCCAGAAGATCCCTAGGCGGCAGCAGGAGTGAGGCCCTGGAGAAGCCCACTTTGGTTCAGCGGGGCCTGGCACACCACACTCCCCACCTTCTCCGAGACCAGTAGCATTAAAGCTGACCGCCTCCCTCCCCACCACCAAAAAGCTGCTGATGCTTTCAGATGAGTTGATTCACCTTCCTCACCTCCAGTGGGAAGCTGGTATGAACCTCAGTAGTGCCCACACTATTTTTAAAATTTTGTTTTATGCAATAAACTGTTTCTAGTGCAGGGCCCTGACCCTGAGAAGTGCTTTGCCATGTACTGAAGGAACTGCGGCCATGTGACTTTTGAGTGATTTTGCAGTAAAGACCTGCTGTTTCT EMBV3_43388 AAGTGCTTCTAGCTTTAAATTCTATACTCTTTCAAAACTTAGTTTTGGTTTTGAGCTTTC Gene BVV0102_257849 + 0 NULL GK000026.2:15897090-15931984 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150188 TCONS_00150184 TCONS_00150189 TCONS_00150192 TCONS_00150187 TCONS_00150185 1 XLOC_091824 Coding TCONS_00150185 XLOC_091824 Coding Coding HELLS 26:15857293-15899798 j TSS112562 5308 1 TCONS_00150185_3 784 0.278070836473248 21 0.875611707133446 3.46656178869965e-05 1.70631898141355e-05 2.36634892881302e-05 4.63139092717515e-05 2.71869160635918e-05 1.78911835541409e-05 4.6410645240965e-05 2.72744019606816e-05 3.30995691534827e-05 4.88398888880566e-10 8.04747871725193e-11 6.37113806683291e-09 3.51783782930249e-10 3.3792350189439e-09 1.52574187182407e-10 0.00236647940776118 0.00114171888911148 0.00227676900516417 0.000213218723471199 8.24126820689582e-05 8.8512325308292e-06 0.000360748829046332 0.00062675967915544 0.000481357544468234 6.5907025840682e-05 0.000188699273606222 9.40934915705036e-05 0.000103417470000851 9.1581067744199e-08 0.00044953430002471 XM_003584083.2 HELLS PREDICTED: Bos taurus helicase, lymphoid-specific (HELLS), mRNA. 0.0 5099 100.00 0.532403918613414 NM_018063.3 HELLS Homo sapiens helicase, lymphoid-specific (HELLS), mRNA. 0.0 3701 88.96 0.531650339110776 TCONS_00150185_3 sp|Q9NRZ9|HELLS_HUMAN HELLS_HUMAN Lymphoid-specific helicase; 0.0 1503 94.14 0.998724489795918 2 coding 0 0 0 0 -0.285755676958755 0.138851996841808 0.00311723655400133 0.948090826617601 CGCGCGTTTTTCTTAGGCTGGGCGCTTGGCCGGGAGACTAGGACAGGGGAGCGGCGAGTGAGGATTTAGCGTGCGGCATTGCAGGCACTGTGAGGAGGGCACCCGGTTCCGGAGTGTGTGTCCAGCCATGCCGGCGCAACGCCCCGCGAACAGCGGCGGCTCGCATGTCTTGGGATAGAGAATCCGTGGACATTCGATATCGTAGACTTCAACATTTGCTTGAAAAAAGCAATATTTACTCCAAATTTTTATTGACTAAAATGGAACAGCAGCAGTTAGAGGAGCAGAAGAAGAAAGAGAAACTGGAGAGAAAAAAGGAATCCTTGAAAGTTACGAAGGATAAAAATTCCATTGATGCAAGTGAGGAGAATGCAGTCATAAAAAAGAAGAGAGGAAGAGAAGATGAATCATACAATATTTCAGAGGTCATGTCAAAAGAGGAAATTTTGTCTGTGGCCAAGAAAAATAAAAAGGAGAATGAGGATGAGAGCTCCTCTTCTAATATGTGTGTAGAAGATCTTCAGAAAAATAAAGATTCAAATAGTAAAATTAAAGATAGATTATCTCAAACGGTTAGGCAAAATACGAAATTCTTTTTTGACCCTGTTCGGAAATGTAACGGACAGCCAGTACCCTTTCAGCAACCAAAACACTTCACGGGAGGAGTGATGCGGTGGTACCAAGTGGAAGGCATGGAATGGCTTAGGATGCTTTGGGAAAATGGAATTAACGGTATTTTAGCAGATGAAATGGGATTGGGGAAGACAGTTCAGTGCATTGCTACAATTGCATTGATGATTCAGAGAGGTGTACCTGGACCTTTTCTCGTCTGTGGCCCTTTGTCTACACTTCCTAACTGGATGGCTGAATTCAAAAGATTTACACCAGAAATTCCTACTATGTTATATCACGGGACCCAGCAAGAGCGTCGGATATTGGTAAAGCATATTCACGAACGGAAAGGGACACTACAGATTCATCCTGTGGTGATCACTTCATTTGAGATAGCCATGAGAGACCGAACTACATTACAGAATTGCTATTGGAAATACTTAATAGTAGATGAAGGACACAGAATTAAGAACATGAAGTGCCGCCTAATTAGGGAGTTAAAACGATTCAATGCGGATAACAAACTTCTTTTGACTGGTACTCCTTTGCAGAACAATTTATCAGAGCTTTGGTCATTGCTAAACTTTTTGCTGCCAGATGTATTTGATGACTTGAAAAGCTTTGAATCTTGGTTTGATATCACTAGTCTTTCTGAAACTGCTGAAGATATTATTGCTAAAGAGAGAGAACAGAATGTATTACATATGCTGCATCAGATTTTAACACCTTTCTTACTGAGAAGACTAAAATCTGATGTTGCCCTTGAAGTTCCTCCTAAACGAGAAGTAGTTGTTTATGCACCACTTTCAAAGAAACAAGAGATCTTTTACACAGCCATTGTGAACCGTACAATTGCAAACATGTTTGGATCCAGTGAGAAAGAAACAGTTGAGCTGAGTCCCACTGGACGACCAAAACGCCGAACTAGAAAGTCAGTAGATTACAGCAAAATAGATGATTTCCCTAATGAATTAGAAAAACTGATCAGCCAAATACAGCCAGAGGTAGACCGAGAAAGAACTATTGTGGAAACAAGTGTCCCTATAGAATCTGAAGTTAATCTGAAGTTGCAGAATATAATGATGCTACTTCGAAAATGCTGTAACCATCCATATTTGATTGAGTACCCTATAGATCCAGTTACACAAGAGTTTAAGGTTGATGAAGAGCTGGTAACAAATTCTGGGAAATTCTTAATTTTGGATCGAATGCTGCCAGAACTAAAAACCAGAGGTCACAAGGTGCTGCTTTTTTCACAAATGACAAGAATGTTGGACATTTTGATGGATTACTGTCACTTTAGAAATTTCAACTTTAGTAGGCTTGATGGATCCATGTCATATTCAGAGAGAGAAAAAAATATACACAGCTTCAACACAGATCCAGATGTGTTTATCTTTTTAGTGAGTACCCGAGCTGGTGGCCTGGGCATTAATTTGACTGCAGCAGATACTGTTATCATTTATGATAGTGATTGGAACCCCCAGTCTGATCTTCAGGCCCAGGATAGATGTCATAGAATTGGTCAGACAAGGCCAGTTGTTGTATATCGTCTTGTTACAGCAAATACTATTGATCAGAAAATTGTGGAAAGAGCAGCTGCTAAAAGAAAACTGGAAAAGTTGATCATCCACAAAAATCATTTCAAAGGTGGTCAATCTGGATTAAATCAATCTAAGAACTTTTTAGACCCTAAGGAATTAATGGAATTATTAAAATCAAGAGATTATGAAAGGGAAGTAAAAGGATCAAGAGAGAAAGTCATTAGTGATAAAGATCTGGAGTTGCTGTTAGATCGAAGTGATCTTCTTGATCAAATGAATGCCTCAGGACCAGTTAAAGAGAAGATGGGGATTTTCAAGATACTAGAAAATTCTGAAGATTCCAGTTCTGAATGTTTGTTTTAAATTGGAGCTAAAAGAATGTCTTCAAAAAGTTCTTGTTCACATCTAGTGATCTGTATTGGTGTTAAAATCCACATTTTTCACTCTACTTTGATTATATCAGTTTACATAATATAACTGTACCATTGCATAATTTTTGAACCTTATTAAGAGCAAATACATATATTAAGAGTAAATTTAGGTTTTCAGTTAATTTTTCAGGTTCAGTAGTACTTTTGGGTACAGGATGATGTGTACTTAACCACTGCCAGATTTATACAGTCTTCCTGTGGAAGTTTAATGTTTTTCCCCCACCCTCCTTTTTAGCAGCACAGTTCATGGGTTTTTGGTACTTCAGTTATGGAGTAGACTTTGGATGGGGGAAAGACTGGGATGATTCTGTCCATTGTTTAAATAAGGAACGGTTTGAGTTTTAGGGTCTATTTCTATAAAATGGTTTGCCAAATAAATATTTGTTATAAGATCTCATCAGGTTATTTTTTCAGATAAATAATGGCTCAGGTGAAATAACACCAAAAGTCTTGACTGCTATTTCGATTTATCAGTACTTTACACGTATGTCATATATATAAAGATTTCAACTGGACACTGGGTCAGTGCAGAGAAGGCTTTGGGAGAAATTACAGGTTCTTGACAGAAGAAATTGGTTCTAGAAATTGGACGTGGCAGGGTACCATGCAAAACAGGAACAGAAAAAGAGAGAAGAGACCCTGAAAATTATAGCAGGGAGGGGTTAAAATAAGACTTAGGAATATAAGTAACACAGGATCCGTAACAGAGGAGCATAGAGGCCAAGGTGGGAATCATTTAGTCCCTGTATGTATGCGAAACTGAGGACGAGAGATACTGAATGCTGCCTGAAGCACACATTTCTGTGAAGGTGGTTACTCTTAGTGCCATGTATATTCCAATGGAGATCAGATTCTCTTTGCTTTAGGGCAATGGAAGCTAGGTAGGACTCAGAAGAAAAACTATTTTGAGAGAATATTCAGCCAAAGTCTGTTCTAAAGAACAGACAACAGAGTGGATTTTCTTCAAAGTGGAAATGTTTACCAGTCTCTGACGATCTATCATCATACTCCATTCTCCAACATTCATCTCAAATGATTATTTCATTTGAGTTTATCTCTGTCCTCATATTTCTGCTACTTCCTCCCTCTGGTCTTGCTCCCTTATCCTCACAGAAAATAATCAGAAAAGAACTTCTAAGTGTTGCCACCATTGCATCTGAAACCCTACCAGCACCTGCGCCCATGTATCCTTTCCTGTATGGATGTAGTCTGTCTTAGCTAGAGCCAACAGAAATGCCCCATTTCTTGTTTTACAGCAAACTCCTTGAAAAGTCTATATTCACTGTTGACTTGTTTCACTTCCATTTTTTTTTCCTGAATCCATTCTGTTCAGATTTTTTAAGTCTCCAGTGACCTCTGAGTCATTTTGAGTCTGACCTCAAAGATCATTTACTTGATCTTTCAGAAGCATGTCATATAGATGTTTAATTTCCACTAACCAGTTTCTGTAGTTCCCAAGTTTTTAGCAGACAAATTTGTCTGGTTCTTCCTACTTCTCTGGCTCTTTCTCAGTTTCCTTTGCTATTTATTTGACTCATTAGAATCTCCCAAGAGAACTTGGGACTCCCTTGATGGCTTGTTGCTTTAAATACCAACTATGTATTAAATGGGTTTCCCTGGTGGGCCTGCAATGTGGGAGACCTGGTTTCAATCCCTGGGTTGAGAATATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTAGAGCATCACTATATAAGGAGCCTGGTGGACTACAGTCCATGAGGTCATAGAGTTGAACACGACTGAGTGACTAAGCACAGCACATGTGTTAACCAATTTTGTAGTGGTGACTCCGATTTATATCTCCAGCCAGAATCTTCTGAACTCGCTTCCAACTGCCTACTTCACATTTTTACTTGGTTGCCTGATAAACTCCCAATCTGAACTTCATGAACTTGTTATCCAGCCTCTTAAAAACACTGCCATTCATGTTATTTTTCAGCTTCTGAAACCCTGTATTGTCTCTTGTGTTCTCTATTTTGAGATTTTAATGACTTTAATCATTTTACTGTGACTTTAGTTTCCAGATTTTAGTTTATGGGGCAAGGGGAACAGATGTATTCATTCCATGATATTGAAACATGTTCCCTGCTTCATCTGTAGGAAAAGGTATTCTCAAACCAGGACTTGTCTTCCATCACTTGGTCAAACTGCCATGAAAAATAGTTCATTAGCTTTATTATTCAGTGAGTCATTCTGTATTATGAGGCAGATGCTGAATGTATTGGGAGGTATAGTGAAAGTGGTACTTGAACATTTCCAGGCAAACACATTTGATGGAATTTTTCAGTAATAGCAATTTGAGTTGTTTAGTCTTAGAACTTTGAAGTAATATATTATGAAAAGCCTGAAATGCAATAATATTTGTATTCAAAACATGAAATAAGTGCTTCTAGCTTTAAATTCTATACTCTTTCAAAACTTAGTTTTGGTTTTGAGCTTTTTAACTTAATGCTACTTAAGTTTTTATGATTCTATTTGCTGTATTAGTACATTTCACAAATAACATACTATGTATTAATACTTTACCATCAATTGTGGTTATAAAAATCAAGCCCAAGGAATCCTACTTCTGAGTAAAGTTGAAGATATCTTTTTGGTCTTTATTTCTTTGGAATCACTGTTATCACTGGTTTATAACTGCTACATTCAGAGAAGAGGTAACTTAAAATCTAGGGGAACTTGTCT EMBV3_33177 TGCGACTTATCCAAGAGGTGGAACTCAAAGCTGCCGCTGCTGATAGAGAAATAAACTTAC Gene GeneID:787651|LRRCC1:XM_002692804:109_cdna Constitutive 1 NULL GeneID:787651 14 GENE LRRCC1 NULL leucine rich repeat and coiled-coil domain containing 1 EMBV3_25165 TTTCGGCAGAGGTGGGGCTGGGCCCTTTCTACCTTTGTCTTAACTTCATGTTGTACTGAG Gene GeneID:751813|BOLA:XM_002697336:270_cdna Constitutive 0 NULL GeneID:751813 23 GENE BOLA NULL MHC class I antigen clone 2 EMBV3_22869 TATACGGAGCTTCTGTGCTGGCGGAATGGATTCTACCCTTCTCCAGGTGAGGCTCAAAAG Variant GeneID:790881|ZNF829:XM_002694956:94_cdna 145^295 1 EMBV3_23625 GeneID:790881 18 GENE ZNF829 NULL zinc finger protein 829 EMBV3_21735 GTGCTCCCAGACCCTGTCCTTCCCCATTCTAGCTTCTCAATCACTTTAGCAGGTTGGGAT Gene BVV0102_261343 + 0 NULL GK000006.2:46749778-46790728 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203107 TCONS_00203110 TCONS_00203106 TCONS_00203111 TCONS_00203108 1 XLOC_124106 Coding TCONS_00203108 XLOC_124106 Coding Coding SLC34A2 6:46724551-46751514 j TSS152222 3942 1 TCONS_00203108_2 693 13 0.854276388991914 0 0 2.09831775530463e-11 0 0 0 0 0 3.87844633793102e-10 0.00460369780706357 0.000932167716174659 0.000158726975949315 1.40159505492012e-09 1.20399079970249e-11 1.35885749255434e-11 0.0648196673699217 0.0173591520198414 0.0414259942897131 0 0 0 0.0092844803659056 0.00777739648166942 0.0154725310885911 0 2.18618948217949e-09 0 0.00242972061877009 0.00071157763240248 0.00333235392210014 XM_005207746.1 sodium phosphate PREDICTED: Bos taurus solute carrier family 34 (sodium phosphate), 0.0 7104 100.00 0.99898528665652 NM_001177998.1 SLC34A2 Homo sapiens solute carrier family 34 (type II sodium/phosphate contransporter), member 2 (SLC34A2), transcript variant 2, mRNA. 0.0 1990 81.50 0.519025875190259 TCONS_00203108_2 sp|Q27960|NPT2B_BOVIN NPT2B_BOVIN Sodium-dependent phosphate transport protein 2B; 0.0 1398 99.42 0.998556998556999 1 coding 1 1 1 0 -0.213506663530189 0.244600902302687 -0.00319522604837724 0.949181348774298 GGGTGCCTGCTCCGGTTCATTACCTGCGTAGAGAGTGCCAACCATGGCTCCTTGGCCTGAGTTGGAAAATAGCCAGCCTACCTCAGAGAAATACACTGTAAAGGCCGATGGTGAGCAGTCTGCCAAGCCTGAGAAAGCTAAGGAGACTGAAAAAGATGACACCGGTACCCCTATCACCAAGATAGAACTTGTGCCGTCTCATTCCACTGCGACACTGATTGAGGAGCCCACCGAAGTGGAAGACCCCTGGGACCTGCCCGAGCTTAAGGACACGGGGCTCAAGTGGTCAGAGAGAGACACCAAAGGGAAGATTCTCTGCGTCTTCCAAGGGATTGGGAAATTTATTTTACTTCTGGTGTTTCTCTACTTCTTCGTGTGCTCCTTGGATGTCCTGAGCAGTGCCTTCCAGCTGGTTGGAGGAAAGGTAGCTGGGAAATTCTTCAACAACAACTCCATCATGTCTAATCCCGTGGCGGGGATGGTGATTGGGGTGCTGGTGACGGTCCTGGTGCAGAGTTCCAGCACCTCCACGTCCATCGTCGTCAGCATGGTGGCCTCCTCACTGCTGCCCGTGCATGCTGCCATCCCCATTATCATGGGAGCCAACATTGGGACTTCAATTACCAACACCATCGTGGCGCTCATGCAGGCAGGAGATCGGAAAGAGTTCAGAAGGGCCTTTGCGGGGGCCACCGTCCATGACTTCTTCAACTGGCTCTCCGTGCTGGTGCTCTTGCCTCTGGAGGCCGCCACCGGTTACCTGGAGCGCCTGACCAACTTAGTAGTGGAGAGCTTCCACTTCAAGAATGGAGAGGAAGCCCCAGAACTTCTGAAAGTTATCACAGATCCCTTCACAAAGCTCATTATCCAGCTGGATAAAAGTATTCTCAACCAAATTGCAATGAATGATGAGTCGGTCCAAAACAAAAGTATGATCAAGATTTGGTGCAAAACTTTTACCAACGTGACTGAGAGAAATGTCACCGTCCCCTCGCCTGAGAACTGCACCTCCCCTTCTCTCTGTTGGACGGATGGTTTGTACACCTGGACCATCAAGAACGTGACCTACAAGGAGAACATTGCCAAGTGCCAGCACATCTTCGTGAATTTCAACCTCTCAGATGCTATTGTTGGCACCATCCTGCTGATCACCTCCCTGCTGATCCTCTGTACCTGCCTGATCCTAATTGTCAAGCTCCTGGGCTCTGTGCTCAGGGGGCAGGTGGCTGCTGTCATCAAGAAGACAATCAACACTGATTTCCCTTACCCCTTTAGCTGGGTGACTGGCTACCTGGCCATCCTTGTGGGGGCAGGCATGACCTTCATTGTTCAGAGCAGCTCTGTGTTCACGTCTGCTATGACCCCACTGATCGGTATCGGTGTGATATCCATTCAAAGAGCATATCCACTAACGCTAGGTGCCAACATTGGCACCACCACCACCGCCATCTTGGCCGCCTTAGCCAGCCCAGGCAGTACTTTGAAAAGCTCACTCCAGATTGCCTTGTGCCACTTTTTCTTCAACATCTCAGGCATCATCCTGTGGTACCCAATCCCGTTCACTCGCCTGCCCATCCGCCTGGCCAAAGGGCTGGGCAACATCTCATCTAAGTACCGCTGGTTCGCCATCGTCTACTTGATCGTCTTCTTCTTCCTGATCCCTCTGGCGGTGTTTGGCCTCTCCCTGATTGGCTGGCCAGTGCTGGTGGGCGTGGCGTCGCCCATCGTCCTTGTGATCTTACTGGTGGTGGTCCTCAAGATCCTGCAGTCCTTCTGCCCTGGCTCCTTGCCACAGAAGCTCCGAAGCTGGGACTTCCTGCCCTTTTGGATGCGCTCCCTGGAGCCCTGGGACAAGCTCATCACCTCCCTCACCAGCTGCTTCCAGATGCGCTGCTGCTGCTGCTGCCGGGTCTGCTGCCGCCTCTGCTGTGGGCTGTGTGGCTGCTCCAAGTGCTGCCGTTGCAGCAAGTGCTGCGAAGACCTGGAGGAGGGGAAGGACGAGCCGGTCAAGTCCCCTGAGGCATTCAATAACTTGGCCATGGACAAAGAGGCCCAGGATGGGGTCACTAAGTCTGAAGTGGATGCCTCAGGCACCAAAATCGTTTCCAGCGTCACAGCCTTGTAGGTAGGGGCTGCCCGGAGCGGGGAGGAGGGCCCTATAGTCCACACGCTCTTGCTCCCTCCTGGTTCTTCCTGCATTTCAGGGGAATTCCTTCCCCACTGAGAAATGACATCCATCCCAGCTCTCATTCCCTTGGCCCAGTGTATCAAGCCCACACAGTAGTTCTATCTCAGCCCCACGCTCCCTGGGCCTTCGAGGCTCGGGAAGGCACAAAACAACACTGAAAGAGAATTAGTGAAACCTGGCCAGAGAGATGATCACAATTGCCCCAGCACACAGCTGGGTTGGTCAATAGGACTACCCCCCGCCCCCGCCCGCCCCCTCACCCCCACCATCCTCTTCCAAAGGAAAAGCCCCAAGGGAGGAATTTAAGGAAGGTTCTCAGAGGTGCATATTCACGTACACTTTTCTTTATTATGATCCAGCTCAGGCTTCTCTCTTTTACAAAAGACCTGCTTCAACCAAGAGCAGCTGCTCCCATACAGTCCAACGCAGCCCAATTCAGGGGAAATGGTGTAATTGTCTGGGATTTGGAGAAGATTTGGTGTGGCCTTTTTCCCTTCTCGGTGCTCCTCATATCCCCTGGCAGGGTTTTCGTAAGAGAGCAGTCGTGTCCCTGAGCTGGCAGGTGGAGGATGAGTGTGGGAATTGGGGAACATTTGAGGGAGATGGTTCATCTCTGCCACAAGAGCCTTGGGTGCTTCTTAACCCAGCTAATTTAAAAACCAAATCGGCATATGTTCTGGCTAAAGCCTAGTGCTGATAAAAATCACTCCTGCTGAGTCTTCTGAAGTAAGATACGCCGGTTCTGAGTCCCCTCCACTCTGCCCCCTGAATCATAAAGCACCTGAGCGCAAGACAGCTCTACACCTCTCTCTGCCCCTTGGCTCCTTGTACAAAATGACTATAAGGGTGAGTTTCAGTGGTCAGCTTCTGCCCATACTTGCACCCACCCGTCCGTCCCTCAAAGCCAGAACCTCTTTCCAGACATTGTCCCCAGACATTGTCCCATAGCCCCATCATAAATGAACTTTGGTTCATCTGCCCTCTCTCCACGTCTGCAAAGCTTCAAACTTTTCAGAGGGTAGAAACCAGGGCATGGCTGGACTGCCCACAGAAGCATGATCATCAAGTGGCAGTGGAGTGCGTGCATGTCTGTGGATCCAAGAAGTGTGCTCCTTCTTGGCCCAGATGCCTTCTCTGTGCCTTTGAGAGCCCCCGTTGTATTATTATTTACACCTCTTCTTGCCCTTGCTTCTTACCCTCAACAAACCTAGTTCTCCCTGGAGAGTAAGTGAGCTTCAACTAAGCCTGGGAAAGGGGATCGATGCAGCCGTGTGCTCCCAGACCCTGTCCTTCCCCATTCTAGCTTCTCAATCACTTTAGCAGGTTGGGATACCAAACTGAGCCTTCCCCTGACCTTCCCTGTGTAGATACAGATTCCCAAACAGAGCCATTTATACTCTATATTTATACTCCTGCAACTGTACAGCATTTTTTGTAAGTTATATAGTAAGTAGTACTGTGATTTGTGTTACGTAGCGCTCTCGTTTGGAAACCAGGCCAGGTTCTACTAAGAAAGACCACCTTTGTATATTTTGTAATACTGCCTTTTAAACGTGCTTCCGCAGCCACACCCACACCACACACCTCTCCAAATATGTAAATATGTACGTTAAACCTGGGCAGGGCCGTGGTCCTCTTTGTACTCTGATTTTTAAAAATTGGATCCTTGTACCTGCGTTGATGGTATCTTTTTTTTTTTTTTTTACTGGTTGTGGGAAGTGAGAGAAATAAAAAATAATCAAAACCCCAAAGGA EMBV3_39187 TCGACCTCTCCAACGGTCACTTGGACACCTTCCGCCTGTCTCTGCCTCGATTCTGGGAGA Gene GeneID:509019|ZBTB7B:XM_002685986:320_cdna Constitutive 0 NULL GeneID:509019 3 GENE ZBTB7B NULL zinc finger and BTB domain containing 7B EMBV3_40620 GAAGTGGATTTCAGCCACACTCTTAGTGACCCCTGCTTTAGCATTTTGGCTTTCCAGAGG Gene BVV0102_123302 + 0 NULL GK000016.2:56706788-56723666 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24524 GGTCTGCTGTGAGGCCTCCCCCTGTTCTACCTCCTCATGTTGCCATCAGTCTAGCTGCCA Gene GeneID:783329|LOC783329:XM_002685141:122_cdna Constitutive 0 NULL GeneID:783329 1 GENE LOC783329 NULL similar to keratin associated protein 10-2 EMBV3_42083 CCATCGACATCCAGACCAGCAAGCTACTCGACATTCACTACTTCCACTGCCTAAGAATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07109 TGACCAGCTGAGCAGTGGCTTCTTCTCCCCCAAACAGCCTGACCTATTCAAGGACATTGT Gene GeneID:327664|PYGM:NM_175786:485_cdna Constitutive 0 NULL GeneID:327664 29 GENE PYGM NULL phosphorylase, glycogen, muscle EMBV3_24770 TTCGAGATGATCCTGAGCATGGTGCTCTGCTGTGGCATTCGGAACAGCTCGGTGTACTGA Gene GeneID:511435|CD81:NM_001035099:263_cdna Constitutive 1 NULL GeneID:511435 29 GENE CD81 MGC127931 CD81 molecule EMBV3_04020 CTCAGCTTTTGGAGAGTATGTGGCTGAAATCCTGCCTATCGCCAGCCCCCCGAGAGTCTC Variant GeneID:287327|NDUFS3:NM_174819:24_cdna 167^689 1 EMBV3_16804 GeneID:287327 15 GENE NDUFS3 NULL NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) EMBV3_26762 AGTGATGAGGATAAGGGAAAACGACAGAAAACCACCAACCCTTCACAACCCGAGGGTAAG Gene BVV0102_124112 + 0 NULL GK000021.2:55199405-55208033 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30554 TCTCTCTGCCCTGTTTCATATTATTTCTGTCCCGTCTCACTGACTGAGCGCCTGCCTCTC Gene BVT0102_024986 - 1 EMBV3_23117 GK000008.2:968097-1023800 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37985 CCAGATGGTCAGCTGCAGGCCTATAGAAAGGTTTATGTGGTCCAGGGCACATATGGTTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11545 TTAAGAGAAGTCCAGACCATTGGCTCATCTCCCCCAGGAAACCTAAACTTTCTTCTGAAG Gene GeneID:615705|RP1L1:XM_002689468:3_cdna Constitutive 0 NULL GeneID:615705 8 GENE RP1L1 NULL retinitis pigmentosa 1-like 1 EMBV3_38748 AGACGATTCCTGCAGACGTGGAGGAAGCTGTTCTTGCCCGCGCCATTAAAGCTTTCACTA Gene GeneID:519311|PTPDC1:XM_002689842:16_cdna Constitutive 0 NULL GeneID:519311 8 GENE PTPDC1 NULL protein tyrosine phosphatase domain containing 1 EMBV3_04975 AGACATTTACCTATGCTAATCAGGGAATACCTGGTATTTGTATTTAAAATGTAGCTAGTT Gene GeneID:767921|MGC127989:XM_002697765:304_cdna Constitutive 1 NULL GeneID:767921 24 GENE MGC127989 NULL hypothetical protein MGC127989 EMBV3_42793 CGGTCCTCCGTTTGCTGAAGACCCCTCCCAGTGGCCAAACAGGCTGTGAAGAGACTTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42966 ACTGTAGCCATCCTACCCCAGCCCACTGAGGTATTGTTTCCGAATGCCAGCAAGAAAGAT Variant GeneID:534354|MTRF1L:NM_001046378:12_cdna 729^846 5 EMBV3_16382 GeneID:534354 9 GENE MTRF1L MGC137648 mitochondrial translational release factor 1-like EMBV3_22713 TAAAAACGTCAAGGCTGATGGATACTCTTGGTATTTCAACATCTAAATTACAGCTAGGTG Gene GeneID:531250|IKZF5:NM_001083713:42_cdna Constitutive 1 NULL GeneID:531250 26 GENE IKZF5 MGC151779 IKAROS family zinc finger 5 (Pegasus) EMBV3_30993 AGAGTTCTCTTATGTCCTCACTGTCGCTTCAATATTCATGTGACCAGTTGTGATGTCCCC Gene BVV0102_252501 + 0 NULL GK000009.2:91752265-92152081 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242618 1 XLOC_149281 NonCoding TCONS_00242618 XLOC_149281 NonCoding NonCoding - 9:92024294-92025300 - TSS182296 1006 1 TCONS_00242618_1 72 0.431411530815109 1 0 1.12704662763254e-06 0 0 0 0 0 0 0 0 0 6.82660567424192e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000827729575921303 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 3e-26 123 88.54 0.0944333996023857 XM_005258944.1 ZNF772 PREDICTED: Homo sapiens zinc finger protein 772 (ZNF772), 5e-11 73.4 80.46 0.084493041749503 0 noncoding ATGGAGTGTTTAGAACTATACTGCTAATTCAATTTTGTCATACCATATATCTTTCTCAAAGTATAGTTTGGAGAAAGAAATTATTTTCAGCTGTGAATAAAACAGGTTGTTAAATTTCTATATTGAGGACATATCAACAATGACGCTGAATCTGTGGCTTAGAATGGTGACAATTACAGACCTTTGCATGTACACGTTTATGATTACAGACACAAATGATACTGCTGTAATAAAATGCTGGCATCTGGGCCTATCACATCTCAATACACTGATAAAGCTGAAACGGCTGAACATATTGGACCTGAATGTCAGGAAGCAGCACACAAATAATGCAATTCAGGTAAACAAAGGAAGGTAGAAGCTAATGGGCAGAAGAGAACATTACAATTTTAAAAGAGAAAGTCTGGCACAACTTAGATCATTTTAATGATAGAAACAAAAGACAAGTCATTTATCATAAATGAAATTTTATATTTGCAGATGGTTTCCTGATTCAAGGTCTTAGATGAAATGTTACACTTTTAAACTTTAAGATTGGTGCTAAACACAGCAAAGGAACAAAATGTTAGATGTCTCAAGGGGACATCACAACTGATCACATGAATATTGAAACGACAGTGAGGACATAAGAGAACTCTATGCCCATGAATTTGATAACTTAGATGAAAAGATCAACTCCATAAAAGATACAAGCTATCATCATTTATCCAAGGAGAAATAGAAACCTGAATATCTAGTGTAGAAATTGAATCAATGATTAAAAACTTTCCACAAAAGAAAACACAAGGCCCAGATGATTTCAAGGGCAAATTCTGCCAAACATTTAAGGAAGAAATAACACCATCCCAAAGAAAAAGAAATGCAAAAAAGCAAAATGGCTGTCTGAGGAGGACTTACAAATAGCTGTGAAAAGAAGGGAAGCGAAAAGCAAAACAGAAAAAGAAAGATATTCCCATTTGAATGCAGAGTTCCAAAGAATAGCAAGGAGAGATAAAAAGCCTTCCTC TCONS_00236262 . 5' 126782 TCONS_00236262 . 5' 126782 EMBV3_31622 CATCGGAAGTTAATGGTAAACCTGAGCCCCACAAAAGACAAAGACTTCTTGCTGCATGCC Gene GeneID:507054|IL33:NM_001075297:47_cdna UTR3_Alt 2 NULL GeneID:507054 8 GENE IL33 MGC142386 interleukin 33 EMBV3_25042 CATTGAGGGAAGAGTGGTGGAGAGAAGTGTAGAATTACTTGTCCATTCAAAATGGGGGTG Gene GeneID:533126|FAM115A:NM_001099054:700_cdna UTR3_Alt 2 NULL GeneID:533126 4 GENE FAM115A MGC138042 Protein FAM115A EMBV3_07765 AACGACATGCTCGATGGCTACTCTGCCTCAACACTGAACCCGAGAAGGTTATTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_02175 CACCCCACATGCCTGGGAATCCGAGGGGCGACTCCAGTGGCCTGAGGAGATGTATTTATA Gene GeneID:528108|SCARF2:XM_002694684:262_cdna Constitutive 0 NULL GeneID:528108 17 GENE SCARF2 NULL scavenger receptor class F, member 2 EMBV3_16316 GTCCTGCTGACCTTCGGGTCAGTGCGGGCTGACAGATGATGAAGTAGTACAGAGAGAGGA Variant GeneID:282646|HSP90B1:NM_174700:920_cdna 161^225 1 EMBV3_16125 GeneID:282646 5 GENE HSP90B1 MGC128904 TRA1 tumor rejection antigen (gp96) 1 EMBV3_27147 GTCGGTGCCCCCAAAGCACCTGTTTTTGTTTTTGTGGCATTTGTACCAGCTGCTGTCTTC Gene GeneID:780867|C5orf28:NM_001079795:2_cdna UTR3_Alt 2 NULL GeneID:780867 20 GENE C5orf28 MGC139853 transmembrane protein C5orf28 homolog EMBV3_21866 AATAAATGTGAGAAAACCTTAAGCCACAGTCCTTCCCTTACTCCACAGCACATAACTCAG Gene GeneID:100126443|ZNF713:NM_001110444:194_cdna Constitutive 0 NULL GeneID:100126443 25 GENE ZNF713 MGC151932 zinc finger protein 713 EMBV3_13129 AGGAGGGTCTTGGAATGCAGGAATGGAAAAACAAGACTCATTAGCATCTTTCCCTCCCCC Gene BVV0102_287488 + 0 NULL GK000018.2:60586349-60598017 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36078 CCCCTCTTCATATTTATTGGAGCAGGAGGGACTGGAGCAGCACTGTATGTCACGCGCCTG Gene GeneID:327704|NDUFA4:NM_175820:8_cdna Constitutive 0 NULL GeneID:327704 4 GENE NDUFA4 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa EMBV3_17732 CGACATGGGTTAAAAGAACCAAAGAGAGTGGAGGAGCTATGCAACAAGATCACAAGCAGC Gene GeneID:528877|NR4A3:XM_002689741:15_cdna Constitutive 0 NULL GeneID:528877 8 GENE NR4A3 NULL nuclear receptor subfamily 4, group A, member 3 EMBV3_16554 GACCTCACCTGCTTTCCTGTGGAAGAGGCCTCGGCACCTGCTGCTTTGTCTGCCTCCCCA Gene GeneID:539882|TUBA1B:NM_001098465:94_cdna Constitutive 0 NULL GeneID:539882 5,17 GENE TUBA1B NULL tubulin, alpha 1b EMBV3_14320 GAAGACGTCCGAGCTACTGAAAAAGACAAGGTGTCCAGATGGTCCCCATCAGCTGGTGTG Variant GeneID:506018|EXOSC1:NM_001015529:84_cdna 352^487 2 EMBV3_17785 GeneID:506018 26 GENE EXOSC1 NULL exosome component 1 EMBV3_26394 AGCTTTGAGTACTCCTACACAGTCAGGGAGATTCGGAACTCAGTGTGGCACTCCATTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23358 CTACAAGGAGCGCTACCTCTTTCTGTTCAGAGGTCAAGGAATTTGCCATTGTTGCCCTGC Variant GeneID:282217|DNASE1:NM_174534:39_cdna 439^554 1 EMBV3_16922 GeneID:282217 25 GENE DNASE1 NULL deoxyribonuclease I EMBV3_41812 AACCATCCCAGAAGGAGCTGTACTGGGACGCGATGCTGGAGAAGTACGGCACGGTGGTTT Gene GeneID:615990|ZNF446:XM_002695513:328_cdna Constitutive 0 NULL GeneID:615990 18 GENE ZNF446 NULL zinc finger protein 446 EMBV3_03233 CCATGACCACATCTCTAGCATGGACATCGATAGTAACCAAAGCCCCCAGAGTAATCCTGG Gene BVT0102_161373 + 1 EMBV3_33061 GK000022.2:44213533-44277965 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126886 TCONS_00126890 TCONS_00126878 TCONS_00126887 TCONS_00126880 TCONS_00126883 TCONS_00126884 TCONS_00126879 TCONS_00126882 TCONS_00126881 TCONS_00126888 TCONS_00126885 1 XLOC_077522 Coding TCONS_00126884 XLOC_077522 Coding Coding LOC100847355 22:44197874-44263137 j TSS95043 4359 3 TCONS_00126884_2 515 28 0.933636725812877 3.6530965709198e-139 5.25828612441671e-263 2.17932299880526e-153 0 0 0 0 0 0 0 0 4.70851051983228e-50 0 8.71999542621762e-39 0 0.000117763990200975 2.67812576148542e-51 0.000952374898375918 3.58160731293603e-178 0 0 0.000304262461526482 0.000142498596488498 5.64747429835194e-05 0 2.77006167789417e-05 0.000197534513887991 9.37057982195929e-71 3.50693783492705e-59 2.0689103173218e-05 XM_005196457.1 LOC100847355 PREDICTED: Bos taurus dynein heavy chain 12, axonemal-like (LOC100847355), mRNA. 0.0 4172 99.96 0.531543932094517 NM_178504.4 DNAH12 Homo sapiens dynein, axonemal, heavy chain 12 (DNAH12), transcript 0.0 5391 90.93 0.887588896535903 TCONS_00126884_2 sp|Q6ZR08|DYH12_HUMAN DYH12_HUMAN Dynein heavy chain 12, axonemal; 0.0 933 91.98 0.966990291262136 2 coding 1 1 1 1 -0.0451082459218202 0.739056364785003 -0.0228671215568821 0.778918250136054 ATGTCAGATCCAAACAAAGCTGCTATTGCAGCAGAAAAAGAGGCCCTGAACTTGAAGTTACCTCCCATTGTTCGTCCCCCTGAAGACATAGGTGTTGACACACCAGCACAGAGTAAGTTGCTGAGTTACAGACGATCCAAGGAGCAGCAGAAGACAATTAATCAGTTAGTAATTGAAGGAGCCAAAAGGAATTTAGACAGAACACTGGGTAAAAGAACACCTTCATCACCAGAGCCAGATTATCCTCCAACTATGACCAGTGAAATTAAAAAGAAAGCATTCAACTATATTTATTTGAAGCAATGTGTAGAGAGTAGTCCGATAGTACCTATTCAGCAGGAATGGCTGGATCACATGTTAATGCTGGTACCTGAGTCTTTGAAGGAAGGGAAAGAACAAGAAGAACTTGTTCAAAGTCTCATAAACGAGGTGTCACGTGATTTTGAAAAAAGCATGAAGAGATATTTGGTGAGAAGTGTTCTTGTGAGACCTGATATTAATTGGCTTGAAGATGAAGGTGGCCCTATACCTGAATCCCCTGTAGGCCTGGATTATTCTAAGCCTTGGCATTCTAACTATCTGCAGACAAGAAACCAAATATTAGCTAATTTGCACATTGTTCATCCAAGCATGAAAATGTTACTGGACCTTGGTTATACAACATTTGCCAATACAGTTTTGCTAGACTTAACTGGAATTAGAGGTAAAGGCCCCATTGATTGTGAATCACTAAGAAATGATTTATCAATACAAGCTAGAAAGGCAGAAGAGAAGATAATGAACACTTGGTATCCAAAGGTTATAAATCTCTTTACCAAGAAGGAGGCACTAGAAGGCATTAAACCTGAGAAACTGGATGCATTTTATAACTGCGTTTCCACACTTATGTCAAATCAGCTAAAAGATCTCTTAAAGAGAACTGTAGAAGGATTTGTAAAACTCTTTGACCCAGAAGATCAACGAAGGCTGCCCATATTTAAGATGGAATTGACTCTTGATGATGATAAAATGGAATTTTATCCTACTTTTCAAGATTTGGAAGATGTTGTCTTTGGTTTGGTTGAGCGAATAGCTGAAGCTCTGCAGAATGTCCAAACAGTACCCTCTTGGCTATCGGGAACTTCAACACCTGTGAATCTTGACACAGAACTTCCTGAACATGTGTTACAATGGGCTCTTGATAAGCTGAAGGTGGCGGTGCATTGTAACTTAGAAGGCGCAAGAAAACATTATGAGACATACGTTGAAAAGTACAGTTGGCTCATTGATGGGACTGCTGTTAAGCTGATAGAGACTTTTCAGGCAGAGGATCATACTTTTGATGAATACACAAAGTTTATAGGAAAATTTTTCAATCTTGCTTCAGAAATAATGCTTTTGCCTCAGTGGGTTCATTTCCCTATGGTGCGTTTGGATTGTGAAGATTTGAAGACAGGCCTAACAAACAAAGCAAGAACCCTTTGCAAACATGTTGCTAAATGATATAGCTTCAAAACATAGGAAAGAAAATGAAAATATTTGCAGTGAATTTGAAGCAGTTAAAGAGCATGCATTAAAAGTTCCTGAGACAACAGAGGAAATGATGGAGCTTATATCTTATGTAGAAAAAGCCCGAACTGTAGGAATTCAGGAGTTGGTTTCACGGATCAAGGAATCCAAACGCCGGATGAGTTACTTTTTAGATGTATTTCTATTTCCTCCAGAAGACTTAGCTTTAAATTCAGCTGTCCTTATGTGGCCTTGGAAAATTAATCCCATCTTTGATGAAAATGATGAGCTCATTGAGAATGCTAAACATAGAAAAGAAAATGAACTAATAGCAAAGAGAGAGAAACTGATTTTGGAAGTAGAAAAGGAATCACGGCGCATGGAAGAGTTTGCAGAATTTGCAGAATTGGACCGCATGCAACAGTATGTGACAGATGTAAGACAACTACAAAAACGTATTCAGGAATCTGAAGAAGCAGTTCAGTTTATTAATAAAGAAGAGGAACTTTTCAAATGGGAACTGACAAAATATCCCGAACTGGATAAATTAAAAGTTAACATTGAGCCCTATCAGAAGTTTTTTAATTTAGTTTTGAAGTGGCAACGAACAGAAAAACGGTGGATGGATGGAGGGTTTTTGGACCTTAATGGGGAAGCCATGGAAACTGATGTAGAGGAATTTTCCCGGGAAATTTTTAAGACTCTGAAATTTTTCCAAACAAAGCAAAAGAAGGAATTACAAGAAAAAAGAAAAGCAGCAAAAAGACGATCTCTGGAAGAAGAGAAACTTGAAGAGGAACCAAAAGAGAATCCTACCATTACTATGTGCAGAATGAGAGCACGTCATTGGAAGCAGTTATCAGAAATTGTAGGCTATGACTTAACTCCAGACTCTGGAACTACACTGAGGAAAATTTTAAAATTAAACCTTGCACCATACTTGGACAAATTTGAAGTGATAAGTGCAGGTGCAAGCAAGGAATTTTCATTAGAGAAAGCCATGCATACAATGATGGGAACTTGGGATGATATTGCTTTTCATATAAGTTTATATCGTGATACTGGAGTCTGTATTCTTTCTTCAGTAGACGAAATTCAGGCTCTCCTTGATGATCAAATTATAAAAACTCAGACAATGAGAGGCTCACCATTCATCAAACCATTTGAAAAGGAGATCAAGGCGTGGGAGGACCGTTTGATTCGAATACAAGAAACGATTGATGAATGGTTAAAGGTACAAGCTCACTGGCTATACTTGGAGCCCATTTTTTGCTCTGAGGATATCATGCAACAGATGCCAGAAGAAGGGCGTCAGTTTCAGACAGTAGACAGACACTGGAGGGATATCATGAAGTTTTGTGCGAAAGATCCAAAGGTTCTTGCTGCTACTTCTTTAACAGGTTTACTGGAAAAACTGCAGAACTGCAATGAACTTTTGGAGAAAATTATGAAAGGCCTTAACGCATATCTTGAAAAAAACGACTTTTCTTCCCTCGTTTTTTCTTCTTATCTAATGATGAAATGCTAGAGATTCTGTCAGAGACCAAAGATCCACTTAGAGTTCAGCCTCACTTGAAAAAATGCTTTGAAGGCATCGCCAAATTGGAGTTCCTTCCCAATTTGGATATTAAGGCCATGTATAGCTCTGAAGGTGAGCGAGTGGAGCTGATTGCACTAATTTCCACATCTGCAGCTCGAGGTGCCGTGGAAAAGTGGCTCATTCAAGTAGAAGATTTGATGCTTCGAAGTATTCATGATGTGATCGCGGCAGCCAGGCTGGCTTATCCAGAATCTGCAAGAAGAGACTGGGTTCGAGAGTGGCCTGGCCAGGTGGTACTTTGTGTTTCTCAAATGTTCTGGACCTCTGAGACACAGGAAGTTATAAGTGGTGGAACAGAGGGATTAAAGAAGTACTATAAGGAACTTCAGAATCAACTAAATGATATTGTGGAGCTGGTAAGAGGAAAACTATCAAAGCAGACCAGGATTACTCTGGGGGCTTTGGTTACTATCGATGTCCATGCTAGAGATGTGGTCATGGACATGATTGATATGGGTGTCTCACATGATACAGATTTCCAGTGGCTTGCTCAGCTTCGTTATTATTGGGAATATGACAACGCTCGAGTTCGTATCATTAATTGCAATGTAAAATATGCTTATGAATATCTTGGTAACTCACCTCGACTTGTCATTACTCCTCTAACTGACAGATGTTACAGAACATTGATAGGTGCCTTCTATTTAAACCTTGGAGGTGCTCCAGAAGGGCCAGCAGGCACAGGAAAAACGGAAACCACCAAAGACTTGGCTAAAGCTCTTGCTGTACAGTGCGTGGTGTTCAACTGTTCAGATGGGCTCGATTATCTAGCAATGGGAAAGGTGCTTTTCAGAACAGTGGCTATGATGGTTCCAAACTATGCCCTCATAGCAGAAATCTCCCTCTACTCCTACGGATTTCTGAATGCAAAACCTCTGTCTGTGAAGATAGTAATGACCTATAGGCTCTGCTCAGAGCAGCTCTCATCACAGTTTCATTATGACTATGGAATGCGAGCAGTAAAAGCAGTTTTAATAGCTGCTGGAAACCTAAAACTAAAATTTCCAAATGAAAATGAAGATATCCTTCTTCTTCGATCAATTAAAGATGTAAATGAACCAAAGTTTTTATCACATGATATACCCTTATTTAATGGAATAACTAGTGACTTATTTCCTGGTGTTAAACTTCCTGAAGCCGACTATCATGGTAAGGTGAGGGGACAAAAGCTGAAGAAGATGGTGAGAGGAAGAAACGGAGTTTGAAAGAGGGAGTCCATGAGAAGATGTAGCTCCAAATCTTTTGGGGGCAACACAGAAATAGAGGCTTAA EMBV3_37720 GAGCTCTTTGCAGAGTTCACTAATTAAGCACACATCCCTTCATCATGCCGACGCTAGGTC Gene BVT0102_417313 + 0 NULL GK000023.2:33385749-33569430 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36572 ATACCGCCTGCTTACAGGAGCCACAATCTGTTTCCATTCTCCAGCATCTTCTCAGGTTCG Gene GeneID:525894|RARS2:NM_001075878:23_cdna Constitutive 1 NULL GeneID:525894 9 GENE RARS2 MGC140742 arginyl-tRNA synthetase 2, mitochondrial EMBV3_41071 CCCCCGCTGGTAAGTTCTCCTTTCCCTGTTTTACTGGTTTTGAACCTCATACCGTTTTAC Gene BVT0101_005088 + 0 NULL GK000014.2:8084809-8148730 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051255 TCONS_00051258 TCONS_00051256 TCONS_00051257 1 XLOC_031145 NonCoding TCONS_00051257 XLOC_031145 NonCoding NonCoding - 14:8087573-8092877 - TSS38261 5304 4 TCONS_00051257_1 73 0.16553544494721 1 0 1.51029745228174e-14 0 0 0 0 0 2.62409057430077e-14 0 4.89294208896858e-11 1.08965895476452e-10 1.7236128660549e-06 8.81731215941139e-11 7.83177574324073e-16 0 3.34908835922506e-11 0.000836105319334856 6.50039057826329e-12 0.00204836218750378 0 0 0 0.000177911231743747 0.000102773475070404 0.000398941854055442 1.08160318570616e-14 4.49698258539393e-15 0 4.75753300279018e-05 3.31368709214564e-05 1.58785270392304e-10 XM_005203874.1 TARS2 PREDICTED: Bos taurus threonyl-tRNA synthetase 2, mitochondrial (putative) (TARS2), transcript variant X2, mRNA. 5e-20 105 89.16 0.0154600301659125 0 noncoding 0 1 1 1 0.186674219913501 0.254070727158029 -0.0145593893468148 0.761620552427994 ATATTAGCTTTAACTTCCTTTAACTTTATGGAAGAGAACCTGTCCTGAGGATGTTTGTATAATTTTATGCATAATATTCCTGTGAGGCTGAGTAAAATTCTTCCATCAACTAAAATCGTAGCAGTAGAACCTGTTCATCTACTTAGCTATCTTTTTTGGGATTAACCAGATGCAATTATAACTGGCTTTTAAAAGTTCCAACCTTTTCCTTGCTTATTTCAAAGTGGTTCTTTAGAACTGTTAAGCTATATGGTCAGTATTTGTCCTGCTGTCTAAAGCTACTTAAATATAGGATTGGGGCTGTTTGTTTTTTAAAAGTAGTTTGAAAAAATTTCTTTGCTACTTGTTCTCATGCAACTTTTATAGGAGTTCAAATTCCCTGGAAAAATAAGGGTTTTGTAAGATTTCTTTGAAGAAGTATAAAGGTTGCTAAAGGTATATAGTTGTCTTAATATTGACATAAATTTTCCTTATTCTGTAGGTATCTCTGAAAATTATTGTTTTAGGTATTCTATTTATGTATATAATCATTGTTTAAAATTTTGTAGTAACATAGTCAGTAGCACATAAAGATACCATATTAACCAGAACACTGGGTTATTTCAAGTAAAGATATGACTTTGAATGAGAAATGGAGTTTGGGAAATAGGTACTGGGAAATCCTGCATTCTGAGATAACTTTCTAAATATGTGGTCATTCTGTATTATTTAGACTAGATGTGAAGAGTATATAAAAATATTCTCTTCACAGTCACATACCACTGGCCACCTTTTTCTTACACTCCGCAGTATTAATAATGGTGATCCTTCCAAGCTCTTGTGTTTTTACACAGTCATACGTTGGTGATATATTTGGGGTTTATTATACCATGAAATCATACCGTATCTTGTACTTTTTTCCATGCTTTGGAGAACTTTCCATATCTGTGTCTCACGTATTTTTTTTTAGTTCTGTATATAAATACACCAGATTACCTGTTGGTGAATGCAAAGGTTGCTCCAGTGCTTCACTGTTGTAGGCTGTCCTGCAAAATACAGAATATTTTGATGCATATTTTGTGTGATTATTTCTGCAAGACCATTTGTAAAGGTATAATTGCTGTGTCAAGGAACATATCTATTTGAAATACTTACAGGTACTGCAGAATTGTTCTCCCAGGAGTCTGTGCCGGGTTACCCTTCGCTGGCAGTCTAGTGCTTGTTCCCTCACACGCTTGCCCCCAGGGCATTACCGTTCTTGTTCGTTTTTTTTGCTGATCTGATGGCCGCAAAAAAATATCTCTTTATTTTCATTCCCTTGTCTAAGAGCAAAGTTAGTATCTTTTCACATTTCTGTTGGTTTTCTTTCTTTCATTTTTATTTGTTTGATTGTTCATCCCCTTAACCCACATTTCTTTTGATTTGTTCATTTGTTCTCATTGTTTTCTAGGAACGCTATATATTTTGGATTGGGTTACTATATATGTGTTGCAAGTACTTCCTCCTAATCTGTCATGTGTTTTTTAAAACTTTATTTTAAACCATTACGTAGTCTTTGGTAACTCTGGGTTTTGTTGTCTTAGGAAGGCCCGTTGCACCCTTAGTATTATAAATGCATTATGCTGAATACATTATCCTTTAATCTTTTGAAACTGTATTTCATCAAGGCTAAGAAATACCGTCATTGATTACATGAGCCAGTATTTTATATACTGAGATAGAGGGGACCAAATCTTGAGGAATGCACGGAGTATTTTCTAGTCGTTTCAAATTTTATTTATAGTTACATAAAGATTTCTTCTAAGACATTTGTTCTGATCAGTTTTTTAAAAACTCTCATAAAAAGGAACGTCTGTTCTGTCAGTTCTTTATCTTTGCATCAGCAATCCTCAGACCTTGGGTGTTCCCCTCAATTTGTCCCTCATTTTAATACAGCTTTCATTATTACTGAGTATTCATCAGGCAGTAATAATGTATATGGAACACCTTTTATGATACAAGTATTTTATTAGATACTTGCATAATGTTCTCATCTAAGCCTTGCAGCAGCCCTTTAAGTGTTATTAGTGTGCTTTACAGTTGAGGAAACTGGGACTCAGAAAAGTTAAGTTGCTTTGTAATTACAAACAGTTAAAGTGATGGAGATTCCTGAGCTCAGAGCAAGCACCCTGGGTACCGTACATAAGTGGTTCAGAGATGCAGGCTGTGGGTCTGAGACATTTGTAGAGATTGGAAAACTAAATACATGGGCGAGATTGACCCTCAGGTATATGGTCAGTCTAGAATGGAGCACGTAAAGTGTGTGATTAAATGTGTGATTCTAATTTTCATACCTTTCAGAACCAGTGTATGCCGTGCCTCCAGATAAATGTTTACTTTTGCCCTTATTAATAAGCTTGCTGATACTCCGGCTCTTGTCAGTTTTCATATTGTTATAGTTCTCGAATCAGTAGGATTTATAACTGGATCTTCCCTTTAATGTGGGAAGTAAATGCAGCGGTACCAGAAATGTTGCATAACCACTCTCTCCATCTGTATGTTAAACCTAAACCAGAGCAGGAGATGAGAATTGTGCACTAGCATGAGCAAAGTCATTGCGTTTGAATCACAGTCTCAGCAGTCCTCCTCCTTGAACCTTTAAAGTATATTTTTAAAACTGCTTACATAATAAGAATGGCAGAGTTTTATTGTGACCCTTGGCAGAGTTTTATTATGACCCCAAGGAAGTTAGTTAAGCTTTTTATTTCCACACAGGCATTTAAAGTTTTTGTTTCAAACTGAACAAACAGAATGAACAGTCCGTACTGTTTGCTTGTGTATAAAAAATGATTGAACAGATCCCAGGCATCTCAGACAGGGCAGGTAGAAGAGTCCCAGGGCTCGTGTTAGGAACACTAACTCAAGTGCCTAGAAAACCTACTGTTGCCACACCATACAGGGATTTGTGGCTGTAAGGGCTGGAGGCAGAGCTCTGGGTAGACAGAGTGCAAGTCTCTTCTCCAGTCCTGTGGCTATCTGGGGTTTAATCCATGCCTTGCAGTTACTTCTGTGTGTAACAGGTTGAGTGTGTGAGAAGCAGTGTTCTTAAAAGTTGGCAAACCTGTTTTACTTGTTTCTCAACCTTTGCAGATCATTGCTTATGAAACACTGGTATTTACAGTAAATATCTTGTTTTAGATGTAGGCCAGCCCCATCCAACCGTTTGTCCTTCAACAACTTCGCCCTTTGGTAAGTTGGCACGTGGTTTGAGGTGGCCTTTGGTGATGGAGTGTCTAAAGGGAAAAGCTAAAGGGAAAGGCATGAAGAGAGTAACATTTCCAGGAGCACGTGATCATACCAGGGATGGACGAGCCCTTGAGAGGAGAAAGGATTATCTCTTGTCTGTGTTATGTGACCTTTGGCTAATTCCTGCAGCATCCTGACTTCATAGCCTTTTGTGTAAATGAGAAGATTTGGATGTTATACACCCCTTTATCCCTGTGACTGCATCCGGTGATCTGTTTTACTGTGCATGTGTGTATGTCAGTAGCTCACAGTGTTAATATTTAGCAGATTGAGTCCTAGATTAAACCATCTGAATTCATTTGTAAAACTTGGTTACCTGTCTCCTAAATTGTAGCCGTAATTTAATTAGATAATCCAGATAGTCCCTTAGTATGGTATCTGGCCCATACTAAGCCCTCAGGAAATAACTTGCTCTTCAAAACTCTGTTCAGATGTCCTAATGCTACCTGTATCTTGGGTCTCCCAGGTGAAAGGGGGAGAGTTCCTCTCGTTGTGCCATACACACGTCTTCCGCTGTCCTCTCATTCAGCACCGTGCTGTGGGTGCTAGCAGGGCTGCTTAGCACTGGTGCGAGAATCGTCACCAGTTTATCTGCATGTGTAGTGCTCCACTTAGATTATGAGCCCCTTGAGGACAGAAACAAGCTTATTTGTCTTCATAAATTCAGTGTCTGGCATGATAAGTTTTGTTGGAGGAAAAAAGTTTATTCCTGTTTAAATAAGGTCCCCTCCTCTCTCAGAAGAAGATAACGTTGGAACAAAGGTGTTCAGTAGAAATATTCTCAGAAATCCTGGGCATAGGGACTTCCTTGGTGGTCCAAGGGTTAAGACTCTGTGCTTCCAGTGCAGGGGGCTTGGGTTCAATCCCTGCTCAGGGAATTAAAGAGTTTGTTTCCATGCCGTGACTAAAGTTCTCACATGCTGCTACTAAGACCCAGTGCAGCAAAATTTAAAAAAAGTTGGGCGTCTTCTCCAAACACCTTTCTTTCTTATTTTTTTTTTAAGTTATTTGCCACTGTACTCCCAAGGATTCAATCAGTTTTTTTACTTTGCTTCTTCACAGTGTTTTCTTTACAAAAAAAACTGAAGTGAGAAAATGACCGCCTGGTGGAGAATAAAGCATCACAATGGCAGCACAAAAGAGTTGCTCCTGGAATCAAGGCCCTGGGGTCATGTTACAGCATCTGCTGCTTTCTCGCCACATGACAGTGATCGAATCATTGTATCTGTCTGACTCTACAAAGTGGGCATGCTTCTGTGACTTGTAATGGTAGAAGTACAGACTCCGGGATGTGAAGGGCTAGAGTCCTCTGGTGGTGCTCTGGTCTCTCAGGTCTTTTCTAAGTTCTTCTAACTTAATCGGAGGTGATACTCATATAGTGCCAGCACTGGACCTGCTTACTAGAACACACTCAATTACTTCATGAGCGGAGTTAGTTCAGTTCATACCATACCCTTGGGGGTGGGGGGAAGCCTATTTATTTTACCTCATACACAATTTTTTATTGTTAAAGGTGTTTAAATTAATTGTACCCTTTGTTCCCTGTTGAAAAACAGAACTCAGATGTAAGTGGTGATCAAGTAATTATAGTTCCATCATGCGGGTGTTGTAGGGAAGAATGAACAGCAAAGGCCTACCTGAGGATTAAGTTGTACGATTAAAGGTTAATACTTTCTCAACACAAACATACGGGTCTCTCCTTCATCCTGTAACTCTTACAGTTAATTTTGGTAACTTGAGACACACACAAAGCACTAAAGCCGACTAGGTCTTCATTGATTGCATGTTCCTTAGAAAAGATGAAGTGTAGGGAAAATTATTCTTAGTACTACTGATACAAATCAAACTATTAGGTGCCTTTCAGCATAGTGCATATGGTATCTGAACCTTTGTCACCTATGAAATTTTTGTCCAAATCACTTCGCAGTTGCCGTGTTTTAAAGGAACCCCTCAAAATCCCCCGCTGGTAAGTTCTCCTTTCCCTGTTTTACTGGTTTTGAACCTCATACCGTTTTACTGAATAAACATTTTCTCCCAACT TCONS_00051253 s 3' 2766 TCONS_00051253 s 3' 2766 EMBV3_16305 CACATACCCTTAATATTTTTTCTCCTTGAGTTGGCAGCAGTCCACGCTTGCAGGGATCTC Gene GeneID:511862|KTELC1:NM_001014903:62_cdna Constitutive 0 NULL GeneID:511862 1 GENE KTELC1 MDS010 KTEL (Lys-Tyr-Glu-Leu) containing 1 EMBV3_40714 ATGCTGATTGTCTTCTATAAACTTCGCAAGCGGCACCAGCAGAGGAGTACAGTCACAGCC Gene GeneID:525767|LRRC4:NM_001014938:173_cdna Constitutive 0 NULL GeneID:525767 4 GENE LRRC4 NULL leucine rich repeat containing 4 EMBV3_17265 TGCCTTGAACCAAGAAGATGCTTCTCAAAGGGGAAGTTCATCACACCTGCTCACTATAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09917 TGGAAACCAGCAAGGGTGCTCACTAGGTCAGGATGCCTTCAAGGAGTGCTAGAAAAGATG Gene BVT0102_037715 + 0 NULL GK000005.2:99439454-99447174 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00990 ATCTCATTTACAACTGCAGCCTATGTACATGTCAAAATAACACAAATGGCTTCAGTACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14091 CAGCTGGCCCTGGAACGATATGAGTGGAATGAGGTGAAGAATGTCAAATCCATTGTGCCC Gene GeneID:100140276|LOC100140276:XR_083976:226_cdna Constitutive 0 NULL GeneID:100140276 19 PSEUDO LOC100140276 NULL similar to jumonji domain containing 3 EMBV3_03040 CAAGCAGTGAACTCTACCTACATTTCCAGGAGCACAGCTGCGATGAACAGTACTTGTGTC Gene GeneID:523536|ZNF639:NM_001099023:11_cdna Constitutive 0 NULL GeneID:523536 1 GENE ZNF639 MGC157200 zinc finger protein 639 EMBV3_27433 AAGTTGGATAACTGGGCACAGTTGGAAAAGAATTAAAAGCATCCAGGAAGACCTCGTGAA Variant GeneID:497023|SPATA4:NM_001011677:5_cdna 433^551 1 EMBV3_40829 GeneID:497023 27 GENE SPATA4 MGC127940 spermatogenesis associated 4 EMBV3_12894 TCCAACTTCAAGGCAGATTATGGACGCTTGTCAACTAGTGTGGACGGGGTGTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_09600 CGGCCGGCGTCATGACGCTTTTCCACTTCGGGAACGCCGGCAAGGGGGAATACAAGATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19411 GAAAGCCAGGCAAGAGCCAAGGGGGCTGCTGTACTGCCTCGATGGGTTTCTAGCAAAGGA Gene BVT0102_091480 + 0 NULL GK000003.2:21206339-21470768 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12943 AAAGACCTAGTCCTTGGATTTGTTTTTGCTGCCTGTGTTTCCTGTTGTCAGTGCCGTGTC Gene GeneID:540545|SYT13:NM_001098115:96_cdna UTR3_Alt 2 NULL GeneID:540545 15 GENE SYT13 NULL synaptotagmin XIII EMBV3_15414 GGGGCTGTAGGGAACTGAGGGACTCGTAATCATGTATTTCTCCCCACCTTCCAAAGTGCA Gene GeneID:282127|ZFP36:NM_174493:517_cdna Constitutive 0 NULL GeneID:282127 18 GENE ZFP36 MGC140545 zinc finger protein 36, C3H type, homolog (mouse) EMBV3_36744 GTATGTTCTACGCGATCACACTGCTCTTCCTGCTCCTCTGGTCACCCTACATCGTGGCCT Gene GeneID:515148|GPR173:NM_001015604:35_cdna Constitutive 0 NULL GeneID:515148 X GENE GPR173 NULL G protein-coupled receptor 173 EMBV3_36535 CTGTCAGTACAGGCGCACCAGCTCCATCCTAACAAACAAGACTGAGGTAAACTGTAGGCA Gene BVT0102_083896 + 0 NULL GK000018.2:25249213-25254470 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082671 TCONS_00082669 TCONS_00082667 TCONS_00082666 TCONS_00082668 1 XLOC_051072 Coding TCONS_00082666 XLOC_051072 Coding Coding CPNE2 18:25191076-25254342 j TSS62309 7333 1 TCONS_00082666_3 548 0.10855038865403 16 0.884343633920809 0.00148832908661965 2.33640189810325e-23 0.00041348467664925 0.000892370271462077 0.000674094320750027 9.58860242460066e-08 0.000493862428710241 0.000640248495382054 0.00177752224709153 0.000261939696557764 0.000365542764324642 5.5796520600397e-05 0.00011939320739377 0.00044390629579219 6.56827699238072e-05 0.000482594376087346 0.000206247754760021 0.000612123783177457 1.72502057929961e-16 0.00022903932553599 0.000539953567205552 2.09550188622786e-05 1.82451226723055e-26 9.12532021698617e-05 0.00135595594849189 0.000971394984543729 0.000486629998134684 7.66186323173147e-05 0.000125047137897962 9.30292697160284e-05 XM_005218746.1 CPNE2 PREDICTED: Bos taurus copine II (CPNE2), transcript variant X1, 0.0 3907 100.00 0.295240692758762 NM_152727.5 CPNE2 Homo sapiens copine II (CPNE2), mRNA. 0.0 2814 90.93 0.274785217509887 TCONS_00082666_3 sp|Q96FN4|CPNE2_HUMAN CPNE2_HUMAN Copine-2; 0.0 1062 96.72 0.998175182481752 3 coding 0 0 0 0 -0.212180527847145 0.58456117371975 -0.0520101962839792 0.326793209646704 GCCAGCCAGGGCCTCCGACACAGGTGGTGCTGCTTCAGACTGTGAGGCGCTGCTGCCGCCGCCGCTGCCAGCCCCTATGGCCTACATACCCGGTGGGGGTGCCCCAGCCTCGGGGGCGGCCCCCGTGGGCTCCCAGTACTGCGTGTGCAAGGTGGAGCTGTCGGTCAGTGGCCAGAACCTGCTGGACCGGGATGTCACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTCACAGAGATGGATGGCAGGTGGATGGAGTACGACAGGACAGAAACTGCAATCAACAACCTCAACCCCGCTTTCTCCAAGAAGTTCGTGCTTGACTACCACTTTGAGGAGGTGCAAAAGCTCAAGTTTGCCCTGTTTGACCAGGACAAGTCAAGCATGCAGCTGGAGGAGCATGATTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTCGGCCTCTGCTGCTGATGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCTCAGGAGCTGTCAGATAACCGGGTCATCACGCTGAGCCTGGCGGGCAGGAAGCTGGACAAGAAGGATCTCTTCGGGAAGTCGGACCCATTTCTCGAGTTTTATAAACCAGGAGATGACGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCCGTGTGGAAGCCATTCACCGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAACCCATCCAGGTTATGTGCTATGACTACGACAATGACGGGGGCCACGACTTCATCGGTGAGTTCCAGACCTCGGTGTCACAGATGTGTGAAGCTCGTGACGGTGTCCCGCGGGAGTTTGAGTGTATCAACCCCAAGAAGCAAAAGAAGAAGAAGAACTATAAAAACTCAGGGGTGATTATCCTGCGTTCCTGCAAGATAACCCGGGACTACTCCTTCCTGGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGGATAGACTTCACAGCCTCCAATGGAAACCCCCTCGACCCTTCCTCTTTGCACTATATCAACCCCATGGGCACCAACGAATATTTGTCGGCCATCTGGGCGGTTGGGCAGATCATTCAGGACTATGACAGTGATAAGATGTTTCCAGCTCTGGGCTTTGGGGCACAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCGGGTGTGGACGGCATCGCCCAGGCATATTCGGCTTGCCTGCCCCACATCCGCTTCTACGGTCCCACCAATTTCTCTCCTATCGTCAACCATGTGGCCCGGTTTGCAGCCCAAGCCACGCAGCAGCAGACAGCCACGCAATATTTCATCCTCCTCATCATCACGGACGGTGTCATCAGTGACATGGAGGAGACGCGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGGCGTGGGCAACGCCGACTTTGCGGCCATGGAGTTCCTGGACGGGGACAGCCGCATGCTGCGCTCCCACACAGGAGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTGCCCTTTCGAGAATTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCAGAACTGCCCCAACAAGTTGTTCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGTGCCAGCCCTCACCCAGCAGCAGCATGCCGGCTGGGCCTCCTGCCCTCCCCAGGAACATGCACGCTCACCCTGCTTCCTTGTGGGTGGCCCTATTTTTTTTTTTTTAAATGATCCACATTTTTATTTTTTACAGCCGGACCCCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGACTTGACTGATGATGCTTCCAGGCCAAACTGGCTTCCTGTCCTCCTCTCCCCATCCTCGCCACTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTATTATTATTATTAAAGAGAATAAAATTTTTACAATCATAATCGGCTTTCTCCAAGTAACTAGCTGCAGACTCAAAGGAACGTGTCCCCGGTGCCTACTCTGTGGTAGCCTGCACCTAATTCCTCCTGTTTTTTTAATACTGTGACCATGTTCTATTTGTTATACTCAGGGTAATAAAGGAGTTTTGGATGTCCCTGTGTCAGCTCCTTCCTCAGCTGGGACCTGACAGGCTCACTGATCTGGGAAAGGAAACATGAGAACGCCTTTCCCCCAGCAAGCCTGTGAAGTCGGTACCATCACCTCTACCTGGGGACATGCATTCCACACAAACAGAATACAGCTGTTAAACTGGCACACAGCCTGGCACATCATGCGTGCTCAATAAACATCTGCAGCAGGATGGAATGCATGAGCCCTCACCAGTGGTCGCAGGCCTCCTGGGCCCCGGCAGAGCCCATGCTGCCCTGGCCAACACACATGGTGCCCTGCCCTCCCTCTTGGTCCACACCCTGGCCTATGTCTCCCCAAACCTGCTCCCCCCACCACAAGACTGCAGTCGCTGCCACCTGTCTGCTCCTCCTGGAGGTCCTCCAGGCACTGGGGTACACCCTGTGGTTTACAGCGCGTGAAAGCCTCTCTGGCTTCAGGATGCTAACTAAACAGGGCTGCTTTTGTCCTGGCTGCAGCAGACGTTGGTTTCTCTCACAGGCCCCACCCTGGGCTCAGGCCCAACCTCATGAAACTAGCCAGGTGACACATCTCTGAAACCCCAGAAGTCCAGTTCCCTCCTCAACATAACAAACATCTTTCTCTCTTGTCCACCTCCTCCTTGGAGGTCCAGTCAGGCCCTACGCCACAGGCCTGAGTGCAACCAACAACAACAGACATTCATATTAAGCACTAGGTTTCCAGCTCCCCACTAAGCATATTACAGGCATAATCTTGATGAACCCTTCCACCAGCTCCTGCCTATGACCATTTCAGAGATGAGGAAACAAGCAGAGGCTAATCAAATCTATTAGAGGCAGAGCCAGAATTCAGCTCCAGGTCTGGCCAACTCCAGAGCCCGCACTTGTTCAACTGCACTGACTGTCTTCCTGAGACTCTACGAGGCCATCTTCTGCTCAAGCTGCTAATGAATTTGCCCTTCCTCTCCAATGAACTGGGCAGTCAGTCATCTTAACCTACTCTCCCAGGTCAGCAATTCTTACACCAGTGGCCTGCTAGATCGGGATGGTGCACCAGGCATGTTGCTACCTCCAGGTTCCTGGTAAGTTCAGGATCTGGTGTCCATCTGGTGGGAGTGAGCGAGGGACATGTATATCCTAGGCTTTTGATGCGTCTGCTGATTCGATGGCCACCAACTCGGTTGAAACATTCTCGAGGACATCTTCACCTCTCCTGAGAGGGCTGCAGGACTGCAGGGAGCTTCAGTGACATTTGGGAAGTCACAGCCCACCAGCCAAGGGCCATCTTGGCCCTATGGATAGAATCCCAGGACTGGCACCTCTGCTTCAAACCCAGCCCTTGCTCAGGCCAGCTGTAAGACTGCATGGTGGGTGAAATAACACCCCACGACTGCTGACTTTACCCTCCTGTTTGGTAGCTGAAGTGAGTCTAGCTGGATGTCACACCCAGGGAAGTTTGTACCCAGTTCAGCCTGGGAGAATCTGTCAAGTTCAGATTGACCAGAGGCTTCTCTAGTGGAACAGCTTTCTCCTCCCAGCCCCACATCCTCTCCTTGGCCCCCAGGGGATGCGTATATTGGGGAGACACCTTCTGATGCAGACCTCTCCCGTACACCTCCCCTTGAGAATAATTTACCAGACTGGTGAAGCTATGGGGACTGACATCTGCTGGATGGATTAAGGCAGAGTCCCTGTCTTGCATCAGGCCCATCATAAAGGCTCAAACTCCTGTGGACCACCTACCTCAGTGTGCTGCCGGCAGCCCCCACTTCACAGCCGCACAAGGGAGCAGATCTAGTCATGTCTTTCTTCCCACTTCTCTGCCCGATGTTGGATGGATCAGTCAAGGAAGCCCTCTACTCCCAGTTGGTTTGAGTTCACCGGGGAAAGGAATGTACTCAAATCCTGACCAGGTAAACCACCACGTAAAAAACAAACCAAATAAGTCAGTCCCGGGGGTGTAACATACAGCACGTTGACTATGGTGAATAATACCAGCTTGTATATTTGAAACTTGCTAAGACGGTAGACCTCAAATGCTGTCATCGCGAGAAAAAGATGGTTTGGTAACTGTGATGATAGGTCACTTCACAATATACACAATATTGAATAATTATGTTGTACACCTGAAACTGTTATATGTCAACTGTATTTCACTAAGAACAAACCACGCCTTGGTGCTATTTGGTTCTTGCACATGGATAGCAGGATGAAAAGTAAACTCAGAAATCTCCTTCACTCTTGAGTCACCTCCACTAAGGCCTGGGCACAAGCATTTGTTTTAAAGTTTCATTGAAACCACAGAAACCCAGACTTACAGGCTCAAATTAAGATTCTGGTTCTGACATCTGCCTGTGTGACCTTGGGCGAGTCACTGAATCACTATGAGCTTTAGCTTCCTCTATAAAATGTAGAGAAGGGCTGCTTCACGGGACTATTTTTTCAGGATGGAAGACACTATAATCTGCAAACATCCCACACATCCCTGGTCCAACCACAGTGGGCCCTCAGTAAATGCCGACTGATGAACAAATTAACATTAAGGGATACGGATATGCATGACCATGCCTAAAACTGAAGGAGACGCCCAGCCGAAGACCTAAAGCTCAGAGCAGACATTGTCTCATGGTCATGCTGACCATTGCTCTGCGGAGCTCTGATGCTGGGGCCCCATTCTGCCTGTTTGTGGTGTGACTCACCTCTCCCTAAACCCTTGCTCCAGCAGGTAAGGGAGCAAAATACCAGCCCCTGCCAGCGTCACTAAGGCAAGAATGCGCAACTGGCTTTTTGTGTTCAACACTATGGAAGTATTGCCAAGATCTAGCCTCCCACCAAGTAGAACTTGCATTCCATACTGTTACGCCTAAGTGGGCTGGGGACACCAAGAAATCAAGAAACATCCAAATTCAAGTGATGGTGCACTGCCACTAAGCTTTTTCTTTTTGTTTTCCTGGAGGGGCTTAAAGATGACAGCTGAGCCATATACCCACGGCTAGGACACCCGAGCCAAGGAACGGGGTGTGCCTGAGCAATTAACATTTAACTGAGAGGAAAGCACACAGGAGACGCAGGCGGTTGGAGCTCTGATGGCCAGATCTGACCCATCACCACGGCAGTGTTCAAGCTACAACTGAGGAATGCCAGCAGGATGGATAAACCTGCCATAAATCACCACTCACAGAAACTCTGGACACTACCCAGATGGGGGAGGCCGAGGATAACAGTACTACCATTAGGATGGCTACCATTTACTGAGCACCGGGTACCACACCAAGTATCTAATCCAGATCATCTTTCACCCTCATTTGTGAAGCTAGTATCCTTATTACCAAGGAGGAAACTGAGGCTCGGAGAGGTTAAGGACTTCGCCCAAGTGACTCAGCCAGTAAAAAATGTCTGGCTCCAAGCACAAAGCCACTGTGATATATCCACAGAAGGCAAAACCAGGTTGGGATTCCTGGGAGGTAGCCAGAAGGGAATAATGAGGAGGCAAGGAACTAGCCTAAGCCACTCCTCATTAGGGGTTTGACTTTCAGTCTAGAATGCTCCTGAAAAAGTCTAGAATGCCCTCCCAACTCTGGGTTTGAGAAATCAGACTTCTCTCCTGGGCACAGGGCTGGCAACAGCATTCCTCATAGACAAGCTTTCTCCCTCACATGGTTCAAAGTTGTAAGAAGACTACCACTCAGGACAATGCAATAGGTTTTAAGAAGCCACCCCAAATCCCAGTTTTATTTCTTATTATCTGGTTATAAAATCCTAATTATCTACTAAGGCAGGAGAGCTGCATTTTGTGATTTAGGCAGTGTTTCCTTCTATCTTTGGTTTCCCTGTTCTTTGGGTTTGAAACACACAGTCTACACTAGATGTTTTTCCAGGGCAGCTTCCTCCACTGGGCAGACCAGACCCTGCTTTGCTACTGGTGGTTTCTACAGAACTCGTGTCTCAGCTCCAGGGCTGTCCACTAACAGGTATGGTGAAAGATGAAATGATCACCAGTGATCTTCAACCGCTCTTGTGACATACAGAGCAGAAATCGCAGTCTGAAGAGTCTCAACCTCCTCGACACAATCTAGCTGTTACAATGGACAGGGAGGGAGTTGGAAGCACAAGCTCCAGTACAGGAAAAGCAAGATCTTGTTCTCTGACAGGTGGATTAGCTTTCAAAGTAATGCAGGTTTTTAATCCATGCAACCGTTTTTCAACTTCTCCCAACATCAACAGAGGCCATGAGGCATAGTAATGGCCTCTGAAAAGTCAAACCACATGAAGATCGTGACTTTGGCTCCTCTGTGTGCCTCCTGAGATGATCTGAGGTTGCCCTGGGTACGGGCTGTAATAACAGCACAATCGCAGGAACAATGAAGCATAGGCAGAAGGTGCCTACAGTTTACCTCAGTCTTGTTTGTTAGGATGGAGCTGGTGCGCCTGTACTGACAGTCAGGAACAATTAGCACAGAGTAGCTCTGAAAAGGAAAAAAAATTCACAAGGCATCGGTTATGGGTGAAGGGAAGTCGCCATCTGCCAGTGGGCACCAGTGTGTCAGTGCTTTGGGAGGGAAAAGGGGTGGGCTGGAAGAGATCCAGGGGCCTCTCTGCCCACAATAAAACAGAGTAGCTTCTCTGCCTGCCAGCATCACAGTGTCAACACATTCTGTGTGTATCTCTCTGTCTCACACCCAAGGAAGTAGAAACAATTGACGTACAAACCCAGGGAAAGAAAGAACTCCATGGGCTCATTCCTCTGAAGCAGGGAAGCCTCCAGATTGCTGCTGTTAAAGCTGACGGTCACCTCTGTTCTCAATGCCTCCATACCTTGTCTCCCCTTGTCCTTCTTTCCCTCCCAAAGGGAGAGCCCCTGCCCCGCTTTAGGAGAGGGGTGGAGCAGCACCTCCGGGTCTTGGCTGCTCTGAATGGGAAGAGCAGAGCAGGAAGGGCAGCAGACCAAAGCAGAGAAAAGTACGAGGGCAGCACCTTTAGGTTAGAAACAGCTTCCACAATTAGAAGCCACAAATATAAATGTATCCAACAGAGAGGGCAGTGTTCCACTGACTTGCAATACTAGAATCAGGAGCTGCCAGAAATAAGTAATCTTGTCCACACACTATCAGTACTTCTGATTTCTGGCTACAA EMBV3_10974 GTAGAACAGCATTATACTTAAGAGACCCTTCAACTGGCCACCGTTCGCCGTCCTCCAATG Gene BVT0102_180707 + 0 NULL GK000030.2:46093745-46303412 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117923 TCONS_00022895 TCONS_00030963 TCONS_00118040 TCONS_00078426 TCONS_00207934 TCONS_00174805 TCONS_00171428 TCONS_00206300 TCONS_00207933 TCONS_00205125 TCONS_00174806 TCONS_00219592 TCONS_00056149 TCONS_00125692 TCONS_00133817 TCONS_00123823 TCONS_00091907 TCONS_00242415 TCONS_00174808 TCONS_00174809 TCONS_00206299 TCONS_00246741 TCONS_00132066 TCONS_00174807 TCONS_00232829 20 XLOC_072089 XLOC_013565 XLOC_017212 XLOC_072206 XLOC_047314 XLOC_126448 XLOC_104695 XLOC_103815 XLOC_124877 XLOC_124587 XLOC_132911 XLOC_033952 XLOC_077234 XLOC_081223 XLOC_075375 XLOC_056677 XLOC_149079 XLOC_151107 XLOC_080699 XLOC_142312 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_19163 TGCGGCCTTACTGGGCTTCCCATCAGATGGGCCCCAGCTTCTGGAAGCCATTGCCCACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25779 TTAGTGATTAGTGTCCTGGCACCCAAGGGTCCTCTCTCTCCTTGTCTCGCCTATGGCTCT Gene GeneID:519624|STX16:XM_002692416:382_cdna UTR3_Alt 2 NULL GeneID:519624 13 GENE STX16 NULL syntaxin 16 EMBV3_26945 AAATGAAGACACAGAGGCTTTCAGATCACATTTCCCGCAGTTAGCCAGGCGGAGTCAGCA Gene GeneID:504597|RFT1:XM_002697014:421_cdna Constitutive 0 NULL GeneID:504597 22 GENE RFT1 NULL RFT1 homolog (S. cerevisiae) EMBV3_29427 CAATTTGAGGAACTCCAGGCACTGGTTACAGCCTTCCCTGGTCACAAGAAAACCAGAACC Gene BVT0102_257099 + 0 NULL GK000010.2:65558772-65575407 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017597 TCONS_00017601 TCONS_00017599 TCONS_00017598 TCONS_00017602 TCONS_00017600 1 XLOC_009068 Coding TCONS_00017602 XLOC_009068 Coding Coding SORD 10:65573548-65632130 j TSS11992 3265 1 TCONS_00017602_3 319 9 0.944418838872672 1.23119248762341e-12 1.85645284528837e-12 2.556394308776e-12 6.933917503243e-13 0 0 0 3.37100729967269e-12 3.88645811613958e-14 0.000858638005914335 0.000361255356239635 5.60466322659137e-05 7.05894994893542e-16 4.63890821803891e-22 3.60712340589008e-15 0.0499752670962627 0.0070784995348747 0.0182824207624262 3.42411742512192e-13 0 0 0.010626929856363 0.00927832571364014 0.0194617090871815 0 6.59763539299413e-15 4.50115393860676e-13 0.00247899732398696 0.000265682668951949 0.00398529074424746 NM_001037320.1 SORD Bos taurus sorbitol dehydrogenase (SORD), mRNA. 0.0 2039 100.00 0.345788667687596 NM_003104.5 SORD Homo sapiens sorbitol dehydrogenase (SORD), transcript variant 1, 0.0 1341 85.53 0.356814701378254 TCONS_00017602_3 sp|Q58D31|DHSO_BOVIN DHSO_BOVIN Sorbitol dehydrogenase; 0.0 656 100.00 0.996865203761755 2 coding 0 0 0 0 -0.0176057458450387 0.920930304430201 -0.0293008007511348 0.62570156726883 TGGAGGTTGTGAAACTGGATCTGGAGCGACTGCAAGGGAATTGGGAGCGAGAGGGTGTGAGCTGTGGTCGGAAGGGTTGAAGGAAGAAGAAGAAAAGTCTCAAACAGGAATCGGGAGACATTGTATTAGGACGATGTGGCCCAGAGTGGAGAAGTAGAACGTTTGAGAAGTATTTGAGAAGTAGAACAGGATTCACAGAGGGAGAATCTGAGCGCGAAGAGCAAAGAACGCCTGGACGTGAGGGATCTCGGAGCACTTCCGGTTGCGGCGGCAGAAGGAAAACTATCCTATCCCTGAACCAGGCCCAAATGAGGTGCTTCTGAAGATGCATTCTGTTGGAATTTGTGGCTCAGATGTCCATTACTGGCAGCATGGTCGAATTGGAGATTTTGTTGTGAAAAAGCCAATGGTGCTGGGGCATGAAGCTTCAGGAACAGTCGTAAAAGTGGGATCATTGGTCAGGCACCTACAACCAGGTGATCGTGTCGCCATCGAGCCTGGTGCTCCTCGAGAAACTGATGAGTTCTGCAAGATTGGCCGATACAATCTGTCACCTACCATCTTCTTCTGCGCCACGCCCCCTGATGATGGGAACCTCTGCCGGTTCTACAAGCACAATGCTAACTTCTGCTACAAGCTTCCTGACAATGTCACCTTTGAGGAAGGGGCCCTGATTGAGCCACTGTCTGTGGGGATCCATGCCTGCCGGCGAGCTGGAGTCACGCTGGGGAACAAGGTCCTTGTGTGTGGAGCTGGGCCAATTGGACTGGTCAGTTTGCTTGCAGCCAAGGCAATGGGTGCAGCTCAAGTGGTGGTGACTGATCTGTCAGCCTCTCGGTTGTCTAAAGCCAAGGAAGTCGGGGCTGATTTCATCCTCCAGATCTCCAACGAGAGCCCTCAGGAAATAGCCAAGAAAGTGGAAGGCCTGCTGGGCAGCAAGCCAGAAGTCACAATTGAGTGCACAGGGGTGGAGACCTCCATCCAAGCCGGCATCTACGCCACTCATTCTGGTGGGACCCTGGTGTTGGTGGGGCTGGGCTCTGAGATGACCAGCGTGCCCCTCGTGCACGCAGCCACCAGGGAGGTGGACATCAAGGGCGTGTTTCGATACTGCAATACATGGCCGATGGCGATTTCAATGCTTGCATCCAAGTCTGTGAATGTAAAGCCCTTGGTCACCCATCGGTTTCCTCTGGAGAAAGCTCTGGAGGCCTTTGAAACATCCAAAAAGGGTTTGGGGTTGAAAGTCATGATCAAGTGTGACCCCAACGACCAGAATCCATGATGTGAATTGAGCTCTGTCGTTGTCCCCACTCTCAGCATGTTGGAGTTCAGTGGTTGACTGGGAGTGGTGGAAGTTTCTTTTGAGTAGTTAGAATAATTAAAATAATTCATTGTAAACAGAGAGCCGTACGCTGGGGAGTTGTGCCTTAAAAACACAAGTAAGATATGGCAGAACCAATACAATATTATAAAGTTTAAAAATAAAATAAAATTAAAAAAAATAAAAATAAAAAAACACAAGTAAGGAGAATTTGGGGGAACTTGTAGTCAGGATGACCTGTTTATGCTGATCAAAGTTCAAGTAGAGCAGAGCTTGGCAGGCAGGTGCTGGGAACTCCCCTTCTTCCTGGAGTACCTGGAAGTTGAATAAGGAAAGAAATCTGCCTATTGAATTCCTGCTTCTATTGTGACTATGGCCAGATGGGAGATGGTAGCTCAGGTAAGAAGAGACCATTTACAACTTTATCAAGACTTAAGTGGCCCAGAAGCTGATTTTCACAAAAATCTGCAGCTCCGGGTTGAGGGTGAAAGGTTGTGAACAATTTTACTTCAGAGCACAGTGCCTCTCCCTTGACACTAGGGCTGTTTGGTTTTATGACAAAAGGAGAATAAGGGACTCACTTTCCTGGATCTAGGACACATAAAAATCAAACAAATAAAATCACGATCTCATGTGAAATCAAACCAGCTTGTATTCCTTAAATGTAGAAACAGACAAGGAACTTTGCAGCACTGCTCTTCAGATCCTGAGAATTCTGTGTGACTTACTTTGCAAGGTGAAGAATCACCTTCCCAATGTGCCCCGCCTGAACCCTTTTGCACATTTGGAGGCAGCCACTGCAGGCTCCTTTATTACTAGGCAACCAGAAAGTGCCTACTTAAGCGTCCTCATGGGAGACCTTAAATCGCGTACAGACTAGCCCAGGAGAGTTTGGGCAGTACACCTGTCTTACCCCACAGGATTAGCATGCCCTTCTAGGCTTAAAGTTCACTAATGATTATTAGACAATTGGTTTAGTTTCAGTCTTTATGAGCAGGAAACTTTCCCTCCTCAAAGCCAATTAAGGGTCTTGGTACCTTTCTGTCTGAGTGGTAGCTCCAACCTTGTCTGTTTTAATTATGGGATTTTCCTGGGTAAGATTGGGGTCTAAATCACACCATGCCATTTGTGACTTTGAGGTTACTGGTCACGAATGAAGATATAATAGCTGGGACATGATTTGGGCTACAGTCCTACCCCTCAGATCAGCTAGGGTTGGTGGGTGAGTTTGAAGAGGTTCTGGTTTTCTTGTGACCAGGGAAGGCTGTAACCAGTGCCTGGAGTTCCTCAAATTGATTTGGGTAATAAATTCTGCTTGTAGTACATGACTGCTGCCCCCATTTGTGGCCCTGTTTGGGGAGAAGTTGACTTTGGTTACCCGTTTCACGAAAGGAAGTATCTGGGGTTTTTGAAAGTAACTCATTTTCTGCATCAAGTACAATTTTCATTGACTGTTGAAAACTTAATGATCTCTAATCCTCACAGCAAGCCAAATATAATTATTTTACAACTAAGGAAATAGAGAATCAAGTAATTTGCTTGAGATCTCACACTACTTTTTGTTTCTTGTGTTATCTTTGGAGTTATCTTGCGTTTACACATAGCACAGGCACACACTCAGGAGCCACATCACTTCCTTCCCCAAGTCCTGTTTAGGTAGGGCCCAACTTGCTGGCTCCCTTCTCTTAAAACTCTTTCCAGCTCAGTGATGCCCAGTGTTCTTGAACGTGGGCTGAGAAAGACTCTTCCCTTTCTAGATGGAAGTCTTCCAATTGAAATACCCCTAAAGGAGGTGGCCTCACTATGTTAAATTCACAAGTAGCCACTCTTCCTCTGACTGTGATTTGGCGGAGAGAGGAAGCCACTGAACCTGAAAAGGACTTAAGAGTTGCAGTGGGGACTCCTGGAAAGGCAGGACCACCAAGGACAAAAACATGTGGC EMBV3_23892 CCACAGACTTACTGCTTCCTCACTTGGGACATTCATCAGGAATATTTGGGCTCCTGAGGC Gene GeneID:100138099|ZNF263:XM_002697944:629_cdna Constitutive 1 NULL GeneID:100138099 25 GENE ZNF263 NULL zinc finger protein 263 EMBV3_01557 AACAGTTGTGCTGACGAGAGGGGTCATTATCCCAGCAAGTGTGTGGTGGAGCAGATCTTG Gene GeneID:530330|GANC:XM_002690827:99_cdna Constitutive 0 NULL GeneID:530330 10 GENE GANC NULL glucosidase, alpha; neutral C EMBV3_06680 AAGTGACTTTCAGGGCCCTAAGAAAGTATTCCCTCCAACACTCACCCCCATGGGCAGTAA Gene BVV0101_008543 + 0 NULL GK000010.2:58324005-58336539 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43401 CAAGGCCCCTACAATTGACATCCGCCCACGATCAGCAACCATTCAAATGAACAATGCCAC Gene GeneID:282240|GABRG2:NM_174545:8_cdna Constitutive 0 NULL GeneID:282240 7 GENE GABRG2 NULL gamma-aminobutyric acid (GABA) A receptor, gamma 2 EMBV3_14099 AAAGTCTCCCCGCAACAAGCCCTAAAAGTCTGAGTGTGAGCAGAGAGTCAGGAAACCGAG Gene BVT0102_186622 - 0 NULL GK000001.2:131243578-131326517 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005246 1 XLOC_001223 NonCoding TCONS_00005246 XLOC_001223 NonCoding NonCoding - 1:131248714-131251443 - TSS2603 2292 1 TCONS_00005246_2 254 2 0.160557184750733 0.000207765918929172 4.38412750096865e-06 2.82626514715777e-05 7.24620007163408e-06 0 0.000152945884047223 4.83430957234727e-05 2.5805863239864e-05 5.85218778508733e-05 0 0 0 1.50224373647726e-05 2.66806167129729e-05 2.14057548693626e-06 0.000230467767282809 0 2.18943179500253e-05 2.19006763529331e-05 0.00178530722669486 0.000280792114816198 0 0 0 6.04578271651023e-05 2.76654782419578e-05 3.32325558642197e-05 0 0 0 0 noncoding 0 0 0 0 -0.138604381949983 0.366350060388624 -0.137748712049472 0.310567470584166 AGCCTGTGTAAATGTGAGGCATAATTGCCACTCACCAGCAGCCGGCTCCGTCAGCGTCTGCACAGCCCACGAACAGGACAGAGGCAAGATGAGTGTTCAGATATATGCACAGGTCGCGTCTCTGTGGAAGATAAAAGTGGGGCCCGGATCTTCCATTCGGCTCCGGAAAGGCGGCCCAGGCCCTTACTCCACAAGCCATCATGAAGGGAGGGGAACCGAAGATTCCTCATCAGCTTGGGAAAACGTGCGGCTGCAGCGCTGGCCGGGGGCCCCAGAGCACAACCTGGTGTTCGTGGGAGGCGCGCAGCGTGGCTGCTGGAGACCCCGCCATCTGCTCATGCAGTCGCCGGGCCCGTCTTCCCCTTCTTTCTTAGGAATAGTTCTAAGCTGCGAGGCACTCCCATCACCTGCGTGTGTCTGCGGAGAAAGGGCCCCAAGCAAGTACCCTGGAAAGCCAGAGGCTGCTGCCTTGCAAAGTCAGTATCGCCGCGGCTTGAGCTCCGCTGCGACCCACATTTCAGATCACAGAGAGAGCAGCAGAATAAGGTCACAAACGCTCTCCCGTCACCACCGCAGACCCGTTCCGCCGACAGGAGGGCATGACGCAGAAAATTTGAGGCCAAGAGCTAGAGGAGCCTCAGGTCTGCACAGACCTGAGACAGTAGCACAGAGGCTCCGCCGCCGCGAAGGCAGGGCACGGGTTCGGATCCTGTTGGTCAACAGAGCCCAGCAGCCGCAAGCGCCAGAGATGCAGCAGAAGTTGCTCACAAGTCCACTCCAAAGGATCAAGTCAGGAAAAGTCCGTCCGGCTGGGGAGCGGGCATGGCCCTCACCTCTCTCCTGGAGTCCTTAAGTAGGAAAATGTAATGCTGGTGGGGCTGGGTCGAGGAAATTTAGTGGCTGAAGACGCAGGGCAAGTTGAGAAATGCAGGTCCGTGCCTCAGTTGGGCCTGGGGGTTGGGGAGCAGCCCCTGGCCGAGTAGCCCCATTCCAGCAAGGCCGGCCTGTTGGAAGTGGCCAGTGGACGGCCCCGCGGCCCCCTCCCTCGGGATTCCACAGGGCTCTGACCCGGCCTTTATCTTGGCGCGGTCAGCAGTCATGGGGGCTTCAGGAAAGAAGACAAAGGCCCGGTGTCACTGCGGGCGGGGGCTCGGTTTCCTGACTCTCTGCTCACACTCAGACTTTTAGGGCTTGTTGCGGGGAGACTTTTAAAAATATGTGTCGAATTTCCTTCTTTCTCCCTAGAAACAAACAAAAAAGCAAGAAGCACATTCCCCTTTCCTGTTCGTCCATTAATATTCCCGGGATCCTGTCCTTTTTTGTCTGCCTAAAGAAAACTTTCCGTGGAGAATTTGGGAAAGGTTTTATTTTATTCGGTTTGATAGGGCCATTATTAAGGACGAGGGGTCAGGTTTTGCTCCTAACGTGAAGAAGCGGAGTCGGTCTCCCGACGTGGTGGGGACTCTGGCGGCCAATGACGGGTGCGCTTCGCCACCTCCGGGGACCATCAGGGCCTTTTGGGCTTCCCCTGCCGGCTCTGCCGTCGGTAGCACCCTGAGGTCGGACAGGCCTAGCCCTTCTCCCCGAATTTGGTTTAGAACTGCTAGGTGGAGCCGGATTCGCTCCTGACTATCCGCGCTTGCAGCGCCGCCACCAGGCCCGCAAACAGGAGGCTCCGGCGCCCGGGCGGGTGTGCGGAGCCGCGGCACCATGCGGTCCTCGCTGCCACCTGCGGGCAGCGTGTCTGCCTGCTGAAGCTCGACCAACCCGCTTCCTGCGTTTACCCTCAGGTTTCCCGTTTGTCCGCAAAGACCGAGGGCAGCCTCTCCCGCAAGCTGATCTTCATCAGCTCCCGCCAGGTGGCTACCTATTGTTTTTCTGAAAAAAAGGAGAAAATTTCTAACAGCCTCGCGTTCTAGAGGGAGGTGCCTGAGTCGCGGCTGTGTCCGGACCCAAGCGCCTGAGTCAGTGTCATTTCGCAGGTTAGCGGGCCTTTTTCAGTGAAAACCTTATCGAAGACAGCCTTAGGAGAAACGAGAGGGAGGTTGGGGAAGCCCTGAACTGGGCTCTCGGTCTGTGCCCTCAAGACTTGGGTATTCCTGTAACAGCACGCGGCTCAGCCCCAGGGCTGGGTCAGGGTGGAAGCAGTCGGCGGCGCACCGCTGCGGGAAGGTGATCGGTGGCCCGGGCTCTTGGGGCTCGTTTGGGTGGCCATAGCCGCTGCGTTTGAAGGTCAGACCCCACAGAGTTACTACCTAAGGTTTTTCCTTTCTTCCTCCCTTCCCCCTCCTC TCONS_00002196 r 3' 5138 TCONS_00002196 r 3' 7317 EMBV3_27042 GACACTGTGAAGCTCCAACATAGATACCAGCAACTACAGCGCCTTGTCCACCCAGATTTC Gene GeneID:786040|HSCB:NM_001102340:110_cdna Constitutive 0 NULL GeneID:786040 17 GENE HSCB MGC179501 HscB iron-sulfur cluster co-chaperone homolog (E. coli) EMBV3_24733 TGCTGATTGGTGGGCCTGTGTTCCCAACCTGTTGACTGTCTGGCCTGAGGATTTCTAGTA Gene BVT0102_010369 + 0 NULL GK000005.2:75084997-75094871 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42430 CAGCATATTAAAAGGGTTATTAAGCATGACCAAGTATAATTTATCCCAGGAATGCAAGGG Gene BVV0102_395316 + 0 NULL GK000012.2:7279763-7497313 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10589 CAGTTATTACCACCCTTAAAGGACATGAAGTGACAGAGTGCAGGCGCTGTGTTACCTGCA Variant GeneID:614729|WDFY1:NM_001046542:178_cdna 650^776 2 EMBV3_13383 GeneID:614729 2 GENE WDFY1 MGC137087 WD repeat and FYVE domain containing 1 EMBV3_36568 TGGATTAGTGGCTTTGCTAACTCCCTTGTGCAGTCCACTCTCACCGTGTTGACCCCAAGA Gene GeneID:618052|LOC618052:XM_002697392:54_cdna Constitutive 0 NULL GeneID:618052 23 GENE LOC618052 NULL similar to olfactory receptor Olr1694 EMBV3_18015 GTTATGAAGGTTATTTTCTTAACTTCTGCACTCCAGAGATTTCTATTTTGTAGTACCTTC Gene GeneID:540831|RBM47:XM_002688207:82_cdna Constitutive 2 NULL GeneID:540831 6 GENE RBM47 NULL RNA binding motif protein 47 EMBV3_35448 TGATCATTGACACATCCATGCGAGGGGGGCGTCTTGGTGTATTCTGCTTCTCCCAAGAAA Gene GeneID:504323|THBS3:NM_001101839:67_cdna Constitutive 0 NULL GeneID:504323 3 GENE THBS3 MGC165905 thrombospondin 3 EMBV3_24467 GACCAATCCAGAGGCTCTTATCAGGACCAGCCTGATTCATTTCAGGTGTACGCAGTTCCT Gene BVV0102_115239 + 0 NULL GK000024.2:39145439-39174408 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140207 TCONS_00140216 TCONS_00140192 TCONS_00140215 TCONS_00140202 TCONS_00140211 TCONS_00140203 TCONS_00140205 TCONS_00140218 TCONS_00140212 TCONS_00140204 TCONS_00140213 TCONS_00140210 TCONS_00140217 TCONS_00140214 1 XLOC_085078 Coding TCONS_00140218 XLOC_085078 NonCoding Coding - 24:39156718-39165738 - TSS104707 1353 1 TCONS_00140218_2 93 0.0931263858093126 3 0.850315999556492 0.000928611475012484 0.0012645514536858 0.00111811631586805 0.000549217880840483 0.00063138841142357 0.000285472102942486 0.000706643828567792 0.000878237189566808 0.000617678619311319 1.04319544850557e-05 5.07579952542563e-06 9.77828516219635e-05 0.000110397946663498 0.00026551098699521 0.000551642605226358 5.85622573936661e-05 0 0 0.00209625007531815 0.0011385055761223 0.00115054763301013 0 0 0 0.00130597428979202 0.0014539912048155 0.00215098403980346 0 0 0 NM_001113538.1 C15H11orf34 Bos taurus chromosome 15 open reading frame, human C11orf34 (C15H11orf34), mRNA. 5e-25 120 82.44 0.0931263858093126 0 noncoding 0 0 0 0 CCTGCACACTCTTGCACTAATGCTCAACTACTTGTTGCACGTGTGGCCAGCGTTGTTGGTGGGCACTCATAATCCCTTAGCATTTGCCGTTTTCCTCCACTTGTGTGCTCAGCCCACACAAGGATAGCTGGAGGCGCCAGGGAGCTAGGTCCCCAGGTGAGGCTTTCAAACGCTGATGGATGGTAATGGATGGTAATAAGTACCCCAGCCTCCTTGCCCTTGGGTGGACCAATCCAGAGGCTCTTATCAGGACCAGCCTGATTCATTTCAGGTGTACGCAGTCCCTCCCTTCCGTCTCTCTCTTTCACTCCGCCATCTTCCCGCTGGTGATGTCTTGGGCAAAGCTGAGCAGCTTTTTTGGAAAGATAATCTGCCTGAGCGGAAGCCGGCGTCATTTGAAACAAATCCCTGAAGTCACTGACTGTGAGTTGCTGAAGAAATCAGACGTGCTTACCACATGACATGCAGTGTGATTCTTCACCATAAATTGTAAGGCTTGGACAGACCGACTTATTGTTCCCTTGTCATCGTGGGATTTGTGCTATTTTTTTGGCAAGTTTTTTTTTTTTTTTTTTCTTCCCAGCCTTAGTTTGTTTCAGTTAAAAAGCAGACTTGAAATATTAGCAAGAGGACAAATCTGTAGTCTGTTTTCCTTCCTTATTTGATTTGTGGAAGTTGAGACTCAGACATTATTCTTGACTTTCTGATGATTTTTCTGGATGAACTCTGGGATTTGACATCTGTGATGCTTGGAAGGACAAGTCCTGCCTCTGTAAAGGACTGTGGGTCTAGACTAAGTCGGACAACCCTGTAGACCATGAGTCATACCCTGGGGCTTTGGACTTGCAGTTATTACATCACTGTCCTCTGTCTGCTTGGAAAACCTAGTTTGTCTCTTTGACGCTTTTGAGCCACTTATAAAAGGAGGCTACCCAGAGGCTAGATAGTGAAAATAAGAAAAAATTCAGTATAGAAAGGGTGAGAGAACAAACAATCCACAAATAATACACTAGATTCTTGGAAATGAGCTACGTGAGAGTAGGTTTACAGGGCACTTGGAGGTTGACCACCTTATGCAAAAGAACATATATTAACTCCAAAAACTGTTTAAAGAATTTTATTGGGGTATAGTTGATTTACAATGCTGTGTTTCAGGTGTGCAGAAAAGTGAATCAGCTTATATATATACATATATCCATTCTTGTTAAGACTCTTCTCTCATATAGGTCAATACAGAGTATTTTTAAGAAAGATCTTTGTGAAGACCTAGGAGAAATCAATAAAAAATTATTTTCTTTTCCCAGTTAAAAAAAAAAATGCAATAGACTAGGCAGTATGACAACTCTAACCAGA TCONS_00140219 TCONS_00140220 TCONS_00140221 TCONS_00140222 TCONS_00140223 TCONS_00140224 TCONS_00140225 TCONS_00140226 s 3' 14940 TCONS_00140219 TCONS_00140220 TCONS_00140221 TCONS_00140222 TCONS_00140223 TCONS_00140224 TCONS_00140225 TCONS_00140226 s 3' 6824 EMBV3_22238 ATGTATGACGAGATCATTGAGCTGAAGAAGCAAACTGCAGACCGATGTGAAGACCACGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05193 ACGCCATCATTGGAGGGATCGTGGCTTTCATCGTCTTCTTGCTGCTCATCCTGCTCATCT Gene GeneID:531178|CADM3:NM_001075946:305_cdna Constitutive 0 NULL GeneID:531178 3 GENE CADM3 MGC139294 cell adhesion molecule 3 EMBV3_36944 ATGATGCTTTCAAGACGATGGATGTGGATATGGCCGAGGAGCATGCCAGGGCCCAGATGA Gene GeneID:100336888|LOC100336888:XM_002700118:8_cdna Constitutive 0 NULL GeneID:100336888 X GENE LOC100336888 NULL hypothetical protein LOC100336888 EMBV3_28656 CGGCCCCAACCCTCTCAACCCACTGGTCACACGCAGGAGAAAGTCCAGTGGCACCCGCTG Variant GeneID:512514|CD27:NM_001082434:20_cdna 864^977 1 EMBV3_27844 GeneID:512514 5 GENE CD27 MGC148404 CD27 molecule EMBV3_43068 AAATCGAGGTCTCAAGAGATTTGACTTGTCCTAGCTGTCTGCAGTTTCAGTGGTGTCAGC Gene BVV0102_112554 + 0 NULL GK000019.2:10635932-10761070 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38361 ACAGGATGGGCAGCTGAGAGACTTCTGAGCTAATGCTCATCTTAGAAGGAAATGAGTCTC Gene BVV0102_252621 - 1 EMBV3_04278 GK000005.2:86949648-87578126 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00232 CACTGAGGAACAATACTAAGATTTGGTACTATATGTTTCTATCTCTACAGAAAACAGTTT Gene BVT0102_036828 - 1 EMBV3_10769 GK000003.2:52391982-52450214 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43559 TCATCATTTTGTACCTCCTTCACAACGTTCCTGGGACCACCTGACTTGCACAGCAGAAGG Gene GeneID:100335511|LOC100335511:XM_002683762:2_cdna Constitutive 0 NULL GeneID:100335511 16 GENE LOC100335511 NULL complement factor H-like EMBV3_12775 AATCACCCAGCCCCCGCTGCTGTCCATCAGGCTGTACCTTCACTGTCTTAGTGCACACGA Variant GeneID:506605|MAD2L2:NM_001045946:37_cdna 459^553 6 EMBV3_22837 GeneID:506605 16 GENE MAD2L2 MGC137331 MAD2 mitotic arrest deficient-like 2 (yeast) EMBV3_15387 CTCGAGACCAGATTCCCCTACTGCCGTGAGCCGGCATATTGCATATTGAGTGCATATTGC Gene BVT0102_135846 + 1 EMBV3_00812 GK000030.2:30963072-30989739 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02801 ACTTCAAACAGAATCAGGTCTTTAGGGTTTTGCCAGCATCGTTAGTGGTTTTGCACACCC Gene GeneID:530910|FRMD6:NM_001102133:88_cdna UTR3_Alt 2 NULL GeneID:530910 10 GENE FRMD6 MGC143214 FERM domain containing 6 EMBV3_24327 TCCCCACTGGGAAGCAGTACTTTCCTGGCTCTAGGGGTTTTGCAATATCTTGGATTGGTT Gene GeneID:521975|TRIM32:NM_001075824:2_cdna Constitutive 0 NULL GeneID:521975 8 GENE TRIM32 NULL tripartite motif-containing 32 EMBV3_11870 TGTTTTGATGCCAACACCGGCCTCTTTGAGAAGCATCGGCTGCGCCTGGTGGCCACTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40669 GAATTTACTGAGGACCAAGTTCTCTAATCAGAATCCTTTGGTAAAATGAGTAATTAGCTC Gene BVT0102_437414 + 1 EMBV3_28053 GK000007.2:104642553-104692816 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214814 1 XLOC_130769 NonCoding TCONS_00214814 XLOC_130769 NonCoding NonCoding - 7:104645109-104651448 - TSS160570 1519 3 TCONS_00214814_1 73 0.0631994733377222 4 0.760965604291575 7.5652174899475e-09 0 0 0 0 0 0 0 0 0.000208579004173198 0.000253354440959227 3.16849732808014e-05 9.06687393128851e-05 1.23870764702644e-05 9.93983375977186e-06 0.000606409916881515 6.55783421135222e-05 9.35610657565955e-05 0 0 0 1.0974288290127e-05 0.000146426105694734 6.88205592854138e-12 3.46963786627843e-09 0 0 3.65451469366305e-05 3.44969494546679e-05 1.26457006600444e-25 XR_231546.1 LOC101905593 PREDICTED: Bos taurus uncharacterized LOC101905593 (LOC101905593), 0.0 1539 100.00 0.560895325872284 0 noncoding 0 0 0 0 ATTGATTTAGGGATTTTATTTTAATATACAGTACTATGTAGTAGATTTTGCTTTGTGATTCTATTTTAGTATCTTATTTCATATATTAGAATAGTCTAGTTGTATTCATTTATATGTAGTGTATCTTTGCTCTTAAGTTATGCTTTCTGGTATTATTGCTTAGTTTATCTTTTTGTAGAGGGATACTTTTCATTGCAAGTAAGAAAAACTTCAAATGAAATAAATTTAAAGTTTAAAGAAGGTACAAAGTTGGTGAGCTCCAGCCACAGTTCTATCAGGATGGCTGCGTGTTGCCGTGTTCATGTCCAGCACAACAGAAACTGAGGAAGACTCTCCTTCAGCCATGGAACTGCTGGGCAAGAGGATAGAGTGCCGAATAGCCAGATGCTTTAATTCCATTTTTAGCAATGAAGTTTGTGCATGTGAAACATGCATGTGGAACCACCTGGTTAGAAGGTTTTTTCCAACACTGTCAAAGCCTCTTCAGGAACAAAGCAAAGTCACCGCTCCGAAAAGTAAATAAGAGACTGGGAGAAAGGAGACCAGGTTTGGCCTCCTATGTCTGCTACTGACTGGGAGACTGCGATGCGCCGTACTTTGCTGAACCTCAGATTCTTCATCTCTGCATGCAGAGGGCTTGCCTGAGGCCCTTTCTTCTAAAACTTTGAATTTACTGAGGACCAAGTTCTCTAATCAGAATCCTTTGGTAAAATGAGTAATTAGCTCTTCCATTCCAAACACTTAAAAATTCTGGACAAAAGAAATTAAAGCCAGAAGCTATCCAAGATATACAAACAATAGATAAACTTGAAGTCTTTTTATCCAAGGGATTCAAAGGGTACCTCGAGCTCTGATTTTTCAGGGCTAATTTATTTACTCAATATGAGCTACAGCTAAAGGTACACTTGAGAAGATATAATAGGGGTTGCGGTTGCAAACTATATACATGGAAGTTGCTGGAACTGGGGTCCATTCATAAAGGAGAAAACAGGAAACACTCTTCACTGTTGAGAATCAGAACTGTTAGAAGGTCATTTATTATCTTGATTGAGTCCTACTGGACCATAAAGAGAAGAAAACACCAAAACATACCACGAGCACACTTTCACAATCCAGAGCACACACAGGGCTCTAACAGTAGAAAATCAAACTCCAGCGAATCTCACTGTTAAAAAACACTAGAAAATCCCATGAGAAAACCACCAGAGACAGTTGGCATCCTTGGAGAAGAGACTTCTCACCTGAGGAACTACCTGGTGGTGTGATCGTGGCATCAGGGGTAGAATAAAGCTGGAGCGGGAAGAGGCCCTCAGAGGGGAAGCTCGGAAAGGCGGATGACAACTTCATAGATGTGCCTGGGCTGGTCTTCAGCAGGAGGCTTCGAGAATTTCAGAATGCTGGAGTATAAACTACTGGAGGCGGGGCTGGTTTTCATTCTAATAGAATCCCAAATAAAAAATACACTCAATGTTTTTCTGCAAGCTTTTCAAAATAAAATGATATCAAGCTAATATAACAC TCONS_00214788 TCONS_00214789 TCONS_00214790 TCONS_00214791 TCONS_00214792 TCONS_00214793 TCONS_00214794 TCONS_00214795 TCONS_00214796 TCONS_00214797 TCONS_00214798 TCONS_00214799 TCONS_00214800 TCONS_00214801 TCONS_00214802 TCONS_00214803 TCONS_00214804 TCONS_00214805 TCONS_00214806 TCONS_00214807 TCONS_00214808 s 3' 2558 TCONS_00214788 TCONS_00214789 TCONS_00214790 TCONS_00214791 TCONS_00214792 TCONS_00214793 TCONS_00214794 TCONS_00214795 TCONS_00214796 TCONS_00214797 TCONS_00214798 TCONS_00214799 TCONS_00214800 TCONS_00214801 TCONS_00214802 TCONS_00214803 TCONS_00214804 TCONS_00214805 TCONS_00214806 TCONS_00214807 TCONS_00214808 s 3' 2558 EMBV3_39262 CAGCATGGCTACCTCGGGATTAGAGTTGTCTCCTAATGAGAAGAGCAGGAACCTGAGCTA Gene BVT0102_070235 + 0 NULL GK000001.2:147615975-147625688 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24066 TCCCCGAGGACATCTGGCAGGGAGGCTCTCAATCCTATGGGCTGCAGTCAGAGCAGTTCG Gene GeneID:100298963|LOC100298963:XM_002694654:175_cdna Constitutive 0 NULL GeneID:100298963 17 GENE LOC100298963 NULL similar to glycoprotein Ib, beta polypeptide EMBV3_18540 GGATTCCACCTCCTTTTGCTTCTCCAGTCAGCAGGAAGAGTTCAGTCAGGATGGCATAAC Gene BVT0102_050592 + 1 EMBV3_27598 GK000006.2:3432300-3456348 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202313 1 XLOC_123940 NonCoding TCONS_00202313 XLOC_123940 NonCoding NonCoding - 6:3432393-3434097 - TSS151868 750 1 TCONS_00202313_1 44 0.453333333333333 2 0.560775102759836 0.000126986365742547 8.03875729485195e-05 0.000209757789008381 0 0 0 8.55317220244648e-05 0 0 0 1.8313477358833e-05 0 0 0 0 0.00119732234287118 4.42727183305808e-05 3.34545357654718e-05 0.000497184477874567 7.67086221352609e-05 3.6428762292501e-05 3.95768454513829e-05 0.000122320581467205 4.47056260402961e-05 0.000120093599606985 4.69697613493532e-05 0.000132807442889767 2.56137568861011e-05 0.00169371925679988 0 0 noncoding 0 0 0 0 -0.029098254901539 0.791174504543438 0.000426166786521381 0.992553206470405 GGCTCAAAGCAAAGTTATGCCATCCTGACTGAACTCTTCCTGCTGACTGGAGAAGCAAAAGGAGGTGGAATTCAGAGAAAACCGGAAAGATCTGTTTCTTTTAATACAAAGTGGACTCCTGGATGGCCAAGGGAGCTGTGGTTGCCACCAGTATTCGACATGACCATGGAGTATCGGACTACATATCCATTGCCTGGGAAAAAGATCAAAACTCATAAGTATGGTTTCTACATATTGCTTTCAAGCCATGGAAAAACTGAAAGTGGAACCATTGTAGTCCAGGACCATCTGTAGTTAAAAGCAGGATTCTGACTGAGCCCAGATTCTGATTCTGCCCTTTAATTGTTCTGTGACCTTCACCAATGTAGCCTATATATTTCACTTTTACTCATCTGCAAAATAGCAATGATAAACTTACTGATTATGAGAAAAACAGTTTAGCACATGTCAAATGCTTGGAACAGGGCCTGGCTTGGAATTGGGCACTAGTATTCACGTATTACTGTTGTTTTCTTTGCTTTAGTAATAGGCAATGTAACTCCTACACAGGCTCCATTCCACTTCTGTCTCCTCTCAAGTGTGTTTCCCTAACAGTGATAGTCTCAATTTATACCACTTGTAATAGGTGTACTCAATTAATTACTTGTATTACTTGTGAGAGCTTCTTGTGTCCTAAGAATAATTCAAGAGCTGGGATAAACAGGGTGGACAATCTCCTGACCCTTAAAAAAATGTATATTCTCTTTGGAG TCONS_00204331 r 5' 73 TCONS_00204331 r 5' 73 EMBV3_04696 TCTGACGAGCTTTATTCGCTCATTACTGTGGGCACGTCTGGAAGTCACTCGCTCAGGGAA Gene BVT0102_064946 + 0 NULL GK000011.2:78228941-78270222 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025618 TCONS_00025605 TCONS_00025606 TCONS_00025607 TCONS_00025612 TCONS_00025615 TCONS_00025609 TCONS_00025616 TCONS_00025614 TCONS_00025617 TCONS_00025613 1 XLOC_014793 Coding TCONS_00025612 XLOC_014793 Coding Coding C11H2orf43 11:78168944-78257674 j TSS18547 4618 1 TCONS_00025612_1 325 0.151797314854916 7 0.948032773952146 0.000738779424343962 0.00050352125763566 0.000438382141147557 0.000449489902822271 0.000749940637455897 4.82049540899385e-05 0.000191955841632707 0.000219924658144814 0.000409375854190842 3.37617418969171e-05 1.20655114563203e-05 1.49557084617903e-12 2.55542832687827e-09 8.55165022616234e-05 2.46834773456484e-05 0.00687203921016883 0.00142796082669327 0.00229906725830753 0.000174710375966915 0.00017123029550358 1.58805323160532e-10 0.00199910522929959 3.72999511743401e-08 0.00266543648267277 0.000453428560181184 0.000384194498191134 1.42823003895421e-07 1.08806537788891e-05 2.67665419738006e-10 1.77518555261712e-09 NM_001079608.2 C11H2orf43 Bos taurus chromosome 11 open reading frame, human C2orf43 (C11H2orf43), mRNA. 2e-150 538 99.67 0.064963187527068 NM_021925.3 C2orf43 Homo sapiens chromosome 2 open reading frame 43 (C2orf43), 0.0 1150 84.30 0.227371156344738 TCONS_00025612_1 sp|Q9H6V9|CB043_HUMAN CB043_HUMAN UPF0554 protein C2orf43; 0.0 533 78.77 0.996923076923077 3 coding 0 0 1 1 0.0533785828508207 0.668357159713882 -0.00248175746226251 0.957713672357397 GACCCTGTGACGCCTAACTGAGGTTTTGGCAGACGGTGGTGTCTTCCGGGTGGACAGAAATGGACTCAGAAATCAAGGAAGAAATTCCTGTGCATGAGGAATTCATTTTATGTTGTGGAGTTGAAACCCAGGTTCTAAAGTGTGGGCCCTGGACTGACCTCATTAATAATCAAAGTGGCACAAGGCCTAAGCTGCTTATTTTCATTATTCCTGGTAACCCAGGTTTTTCTGCCATGTATGTGCCATTTGCAAAGGCTTTGTATTCTGCAACAAAAAGACGCTTTCCAGTTTGGATTATCAGTCATGCTGGGCATGCCTTAGCCCCCAGAGGCAAGAAGATTCTTAAAAGCTCAGAAGATCCAAATGCTGAAGAAATTAAGGACATCTATGGAGTCCGTGGTCAAGTAGAACACAAATTAGCTTTCCTGAGAACTCAAGTGCCAAAGGAAATGAAGCTTGTGGTCATTGGCCATTCCATAGGCTCCTATTTTTCCCTTGAGATTCTGAAGCACGCACCTGAGCTCCCAGTAATTCGCTCCATTCTGCTGTTTCCAACAATTGAGCGAATGTCTGAGTCACCCAAAGGCAGGTTTGCCACACCTCTTTTGTGCTGGCTTCGATATGCTCTCTATGTTCCTTGCTACTTACTGCTTAAACCATGGCCTGAGAAAATCAAGTTCTTGGCGATCAGAATGGTCCTTCAAATGATGGACATACCAAGGGAATTTTTGTGTATGAATATGTTGGAACCATTCTGCCTTGTTAACGCTGCCTACCTTGGGAGCCAAGAAATGAGGGAGGTAGTGAAGAGAGATGACGAAACCATCAAAGAACATTTACCTAAGCTTATATTTTACTACGGTGCTACAGACAGTTGGTGTCCAAAAGAGTACTATGACGACATGAAGAAAGATTTTCCAGAAGGAGATATTCGACTCTGTGAGAAAAAAATACCTCACGCTTTTGTCATGAGTTTTTTCCAGGAAATGGCCGACATGGTAGCCGACTGGCTAAAGGATGATCTGTCCAAAATGTAGACGTTGTCACAAGGTGCGAGTGCCGACAGCTGGCACATAGAGGCAGTAGGTATACTGCCCCCTAGCGGTAAGCAGCATACTTCATAGGCGACTGCCTCCTAGCGGTAAGCAGCATACTTCCTAGGTGACTGTCTAATTTTAATATTTGATGTTAGAAGAGAAAAAAGTGAGACCCTCTTGGCTTAAAAAACTGTCAGTTCCCAGCTCCCCATGCTACAGACTGCAACAAACACAGTTGACCAATATTCCCTGGAGTTAACAACACATTCCCAAGACTCAGGGAACACAACAATCTAAACAAAGTCTTTCACGTGTGCACGAAATGCCCAGTGGCACCATCAACTTAATTTTGATAGGCAGGATCATTGCACAAAAGGAAATCTAAATTTTTTATTTTAATTTACAATGTAGAATAGCACCCCTCCCCCAGAGAAAATTATGAAAGAACTACTAGAAAATGTAAAAGACCAGTGAATGTCAAGTGCGTAGTCAGACATGTGAAAAATGAAATTATGAGAAGAATACACTCATCCAGGAAGTGACAAGCAGTGGAGCTTGGCAGTGGACCCGCGTCTCTCTTAAGAACAGAAGCTGAAGGTCAGCCCAACTAACTTTGCACAGATCTTGGCTGAAATCACCAAAATCCGACTGGGTACCAGGACAGCCTCCACACCCTGCCTCTTACTACCTTGCAGCGTGTCTCAGACCACCAGGTCAGCCTTCTGTCTGGCCGCCGGTGCACAAGCCCCAGCAGAGCCAGTGGCAGGGGACGACGCACTGCCTGTCTCCTTCCCTGAGCGAGTGACTTCCAGACGTGCCCACAGTAATGAGCGAATAAAGCTCGTCAGACGTTCCTCTGGTCAACTAAGAGCTAATAAGCGTTACTGAAGGATTCTGACTATACATTCCTCCACAGCCAACCAGTAAGTCCTGATTGTGAGCTCCCTGCAGGCTTCCGTTCTCCAGAGCCAGCATGGGCTGACACTGAGCTGCCCCCGATGAAGCTCGTACCTGCCACAGCTAACTGCCCATTCTGTGATTTTTTTCAGTCAAACTCCACTGCAGACCAGCAATGAGCCAAGTACTATAAAGACCTTGAGGATAGACTGTTAGCTACATTAATGATTCTTTTCTTCTGAAAATCTTCTAGGAATTAAATTTTGAAAGGGCATCTTTAAATTGCTGAATAGAGGATCATCATAAATGAGTTATCCAGTTAGTTGGAAAGAAATTGTTTTACTAATGAACAACAACAACAACAAATACCCATTAAATTATGTGAATTCACCCTCTCCAAACACCTTGAGTTCCAATAACGAAGAAGCTTGTTCTCTGACCTAGAGCTTGCTAACAATATTGCTTCCTTCCCTAAATTGATTCAATCCTGGGACCTTAGGATTTACTTAGCCAGTAAATCCCATTGACCGCAGTAATTGTTGATGATAGATAGAAACATTCCATTTTTTCTCCTGGAGGAAATCCCTCATGGTGTTATCATTTCATAAGGACAAGGGGATGTTGTCCTTCTTCTCAAAACCTAAAGCCCTCTGATGAAAGATTCAGCTCTGATATGCTGCCAACCCAGTGGTGAATGTCGAATGAGATATGATCCTTTGGCCTGGCTTCCACATCAGAGCAAATGACGTCTCAGAGGGGAGGAGCCAAGCTCCAGGCAAACAGTGCTCTCAGCCCCAGAAAGGGGCCAGTAGATGTATAAGCCATTGGCAGAAGGCTGCATATATAAAGTCCTTATTGGCAGCTGTGTGGAGAGGCCTTCTAGAAATCTAATGTTAGGAGCTGGGTCTCAGGGCTCTGAAGTACCTTGCATACAGGAGATGCTCAATAAGATACTGAAGCACTTAAGCAAAAACTAGGTAAATTATGCTACTAGAATCAAGAATAACATGCCCAGTGTTTCTGTTAGCCTTATTTTACAGTGTTACTTCATGTTTCAGAAGTCCACATGTATGAAATTATATCTGATAAACCAAAGTTTACCAGAGCTTAAAAAATAATAAGTAAAATGATAAAGTAAAAGATAATGGCTTGTAATTCTGTTACTCATCTAAGCACCAAATGAATTTTCAAAACAAATAGTTTACCCACACTTTATGGTCTTGCCTGGCCTGACCTCTGTATGTTGGGGAGGAGGATTACAATCTTCACATTCTCCTGAGGTAGACTCAGGTCATAGCCTCTCAATTAAGGGCTTCCCAGGTGGCACTAGTGGTAAAGAAGCCATCTGCCAACACAGGAGACTTAAGAGATGGGGGTCTCCATCTCTTAAGGAAAAGGCAATCCACTCCAGTATACTTGCCTGGTGAATCCTGTGGACAGAGTAGCCTGGCGGGCTATAGTCCATGGGTCGAAAAGAGTCAGACATGACTGAAGCGACTTAGCACACATGCACACTCTCAGTTAAATTGAAAGCCACTTTTTCGATGCTTCTTTTAGAGAGGGAAGGGTCAGATTTTGGAAGATTGAAGCTCGTTTTATTTCATTAGGAATTAAACAAAAGTGTTCATGCATGTATATGAGGTGATAAGGTATGTGAACTCTGGAGGCCTTACCATCTGTGTGATTTTGGACAGCTTCATCTAATTTCTCCATGTCTCAGTGTCCTCATTCATAAGATAGGATTAATAATAATACGTACCTCATATTGTTGGAAGAATGGGATGATTAAATGAAAGCATTTAGCACAGTGCTTGACAAAGAGTATCTTCTCAATAAAGATTGGCTGTATTACTGATTATTAAACATCATCATAACATAAAATAAACAAAAGACTAAAGTTCGTAGGCAGTGGGTGAAATCCATTTTCCAGAAGCATCTCTGCCTGTGTATGCCAGTGCGCCACTGTGATGGTCCTTGTCAAAAGGTTTAATAACCTCCTCTGGGGTTATCTAGTGCTGAGTGAAAGACCTACACTGGAAATCATGCCTGGTTGTCCCCATTCTGCTCTGGACCACGAGGGAGAAGCCCCAGAGGCTACCCCTGTGGCTTTTTGTGGCCAGACACTCAAGGCAACAGCCCACTTAGCATAGGCCTCCTCCAGTCAACCTTTGAAGAGCCAGTGACCTCCAAAGGCTTGATTTTTCTTTATCCTACATTATATTAAGTTTAATTCCAGACTTGAGGGAACACAACAACTTAATATAACACTTGATTCTGGATTAGATGTTATATTAAAAAAAAAGAAAGAAACACTGTTGGGGCAGTTTGAAACTTCATTGCATGGGATCTAAAGTTTTTAAATGGGAGTAAGAGATCAATGATAATGTTCTGATGTCAGTGGTTTTATTGTGGCTAAGTAGGAGAATGTCCTTATTTTCAGTGAAGACACACTGAAATGCCTGGGAGCCACAGGACATTATGTCAGCTCTCAAATAGTTCAGAGGAAAAAAACGTTCTTCGTTCTTGCAACATTTCTGTATGTTTGAGATGATTTTGAAATGTATACAAATAATTATTTGGGGGGAAAAAAAACATGCTCTCTCCTCCTGCATCTGTCTCTTATTGCTTCTTTTCCAAAAAGTGAATTATTTCTTCTAGGAAGTAAATGAAGACAACGACTGTGT EMBV3_25743 TTCCCGCCTGGTCACGTGCTTGATCATTGCCAGTTGAGCAGCATGATTCGTCACTGCTGA Gene BVT0102_229695 - 1 EMBV3_01155 GK000005.2:114100142-114291723 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00223720 TCONS_00201906 TCONS_00201912 TCONS_00223729 TCONS_00062705 TCONS_00063594 TCONS_00223718 TCONS_00070446 TCONS_00201908 TCONS_00063595 TCONS_00087818 TCONS_00187685 TCONS_00062707 TCONS_00032895 TCONS_00112239 TCONS_00232656 TCONS_00187642 TCONS_00223721 TCONS_00232652 TCONS_00140816 TCONS_00232666 TCONS_00223731 TCONS_00032894 TCONS_00223736 TCONS_00223726 TCONS_00054102 26 XLOC_137019 XLOC_123551 XLOC_123557 XLOC_137028 XLOC_037432 XLOC_038320 XLOC_137017 XLOC_042224 XLOC_123553 XLOC_038321 XLOC_052607 XLOC_113730 XLOC_037434 XLOC_019131 XLOC_068136 XLOC_142141 XLOC_113687 XLOC_137020 XLOC_142137 XLOC_085245 XLOC_142151 XLOC_137030 XLOC_019130 XLOC_137035 XLOC_137025 XLOC_031911 NonCoding TCONS_00232652 XLOC_142137 NonCoding NonCoding - 8:74490841-74491032 - TSS174156 191 1 0 8.90426085981827e-05 8.76827517498378e-06 0 0.000287433013846503 0.000585912641117323 0.000113036814934289 0.000177427910463942 0.000253192613927691 0.000640987344614641 0.000341677935697874 4.39459328713284e-06 0 2.62892366971657e-05 0.000834897381702216 3.42492077909802e-05 0 0 0 9.38603191696777e-06 5.02019017068405e-05 0 0 1.20079109953236e-05 0 0 0 1.02253888664862e-05 0 1.69445320918666e-05 0 XM_002707870.2 LOC100297422 PREDICTED: Bos taurus olfactory receptor, family 5, subfamily D, member 13-like (LOC100297422), mRNA. 4e-22 107 73.77 0.942408376963351 0 noncoding 0 0 1 0 0.116881084633565 0.451925179500013 -0.751694190943773 0.000131260366214379 TGCGTGATTCCTGTCGGCTCATCTGCTTGACAATTGCCAGCTGAGCTGCGTGATTCCTGCCTGGTCACGTGCTTGATTATTGCCAGTTGAGCAGCATGGTTCGTCACTGCTGAGCTCCATGCTTATTGCCTGCTGATTGCGTGGTTCGTGTCTGCTCAGCTCTTTGAGTATTGCCTCCTGAGGTCCCTGTT TCONS_00228133 . 5' 66105 TCONS_00228133 . 5' 66105 EMBV3_03141 AGTGGAGAATCACAAAAAGCAGATGCTCAGGAAAACTGCCAAAGAGAGCCTGGCCCAGAC Variant GeneID:614520|BNIP1:XM_002696254:22_cdna 276^377 1 EMBV3_11127 GeneID:614520 20 GENE BNIP1 MGC133975 BCL2/adenovirus E1B 19kDa interacting protein 1 EMBV3_20891 ACGTAAATGGGATGAGACGCTCGGGAGCCTTGGAACCAGTAGGCTCTCCGACGACGTTCT Gene BVT0102_423110 + 0 NULL GK000025.2:10057596-10092221 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20042 TGGACATGAAGGAGGAGATGATGAACGACGCCTTCGAAGGGACTGACTGCCCGTGCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38171 AGCTCTGTGCTTCCATCATCCTGCTTGACAGTCTTTCCACTCGGCTCCCTACTTGCTGAA Gene BVT0101_045371 + 1 EMBV3_18601 GK000019.2:35787199-35816340 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33741 TGAAGAAGTCCGTCCAGAAAAACGTTAAAGCACAACAAAGAAAACTGAGGAGGCAAAAGA Variant GeneID:537386|C25H16orf65:NM_001076094:368_cdna 109^478 3 EMBV3_16333 GeneID:537386 25 GENE C25H16orf65 C16orf65 MGC134002 PDZ domain-containing protein C16orf65 homolog EMBV3_32315 TCTCCATGCATCTGCACGTCTCCTGGACTCCCATTCACGGTGCTACTCAGAGGGGTCTCA Gene GeneID:613842|PDCD1:NM_001083506:32_cdna Constitutive 0 NULL GeneID:613842 3 GENE PDCD1 MGC143264 PD-1 programmed cell death 1 EMBV3_18772 CCAGCCCACCACCAAGGACGGTGTCACAAGTGCAACCCATGTACAGAAATCTTCCAAAGA Gene BVT0101_006164 + 1 EMBV3_30508 GK000017.2:45499181-45501311 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077109 TCONS_00077110 TCONS_00077108 TCONS_00077106 TCONS_00077107 1 XLOC_046987 Coding TCONS_00077107 XLOC_046987 Coding Coding PGAM5 17:45490379-45511335 j TSS57727 5743 2 TCONS_00077107_8 248 0.199199024899878 10 0.726413743736578 0.000169625584177313 5.43457837767203e-05 0.00011840383070427 0.000179422328892911 0.000127785873142565 6.03270062255295e-05 0.000154019407521008 8.34408909345715e-05 9.03251690366279e-05 7.68503389246488e-99 5.65726397840748e-27 2.69503706349093e-06 1.31884584812565e-05 6.72714868822952e-114 9.83199527137458e-68 0.000140229705135129 6.62165000701878e-21 2.98526570484762e-05 8.92228901640691e-05 0.000221028183866619 0.000104180975699027 1.20246024263218e-05 2.55098326990287e-259 1.52521345140834e-13 0.000120561091795245 5.581085414351e-05 0.000154094963307003 2.93147380750018e-06 1.04801385111107e-38 0 XM_005217654.1 PGAM5 PREDICTED: Bos taurus phosphoglycerate mutase family member 5 (PGAM5), transcript variant X2, mRNA. 0.0 2845 100.00 0.274421034302629 NM_001170543.1 PGAM5 Homo sapiens phosphoglycerate mutase family member 5 (PGAM5), 0.0 930 85.77 0.139300017412502 TCONS_00077107_8 sp|Q96HS1|PGAM5_HUMAN PGAM5_HUMAN Serine/threonine-protein phosphatase PGAM5, mitochondrial; 8e-168 470 93.33 0.963709677419355 1 coding 1 1 1 1 -1.65483373215857 0.0189672310757517 0.00370523483135414 0.961612196452558 GTGGACCGGGGAAGACGATGGCGCCGGCGGCGTCGAAGCTGCGGGCGGAGGCTGGACTAGGGCCGCTCCCGCGGCGGGCACTCTCCCAGTACCTGCGCCTTTTGCGGCTCTACCCAGTACTCACCAAAGCGGCCACCAGTGGCATTTTGTCAGCACTTGGGAACTTCCTGGCACAGTTGATTGAGAAGAAGCAGAAAAAAGAAAACTGTTCTCAAAAGCTAGATGTCAGCGGGCCTCTCAGATATGCCATCTATGGGTTTTTTTTTACAGGGCCACTGGGTCACTTCTTCTACCTCTTGATGGAGCGCTGGATCCCTTCCGAGGTCCCCTTGGCAGGCATCAAGAGGCTCCTCCTGGACCGCCTTCTCTTCGCACCCGCCTTCCTGTCTTTGTTCTTCCTTGTCATGAACTTCCTGGAGGGGCAGGACACCGCCGCTTTCGCTGCCAAGATGAAGAGCGGGTTCTGGCCAGCGCTGCGGATGAACTGGCGAGTGTGGACACCTGTGCAGTTTATTAACATCAACTATATCCCTGTGCAGTTCCGGGTGCTTTTTGCAAACTTGGTGGCTCTGTTCTGGTACGCCTACCTGGCCTCTCTGGGGAAGTGAAGATGACCTGGAGAGGGTGTCAGACATACTGATGACTGGGGTGGGGTGAGAGAACAGAAATAAGCCAGCCAGGCTCTAGATCATGAGATTCAAGATGACTCGAACATGATGGATGGAGAAAAAGAAATCTCTTAATGTCAGAATCGTGTTTTAAAAAGGCAATCGCTGTCCTCAGGTGGTGCTGCCCTAGAAACTTAAATATAGCAGAGATGATTTCACCTGTCACCTTGGATTGAATTATGATCACAATAAACTATAATGTAGCATTTTCAGTGGTGATTTTAATTTCTCAGAATAATTGCTGTTGTTTTGATAGAAATGAGTGACCAGAGGACTGCTCTTGGAATTTTTTAAATGTTTAAAAATTTGTAGTAAAATATATCACAATACAACTGTTTAGCTACTTGGCCCCATAGGGCAAGGGCCCCTTAGACCAAGACTTTCCCTGACCTTCTGAGAGGCCCTATATACCACCCTTTCCACTGGGTCTACTCTCCTGTTGCTCATTTACATTAGCCCTCCTTCCCTAGTTTTTCATTCTTAACATTCCTTCCTGATAGTCTCCCATCCTTATTTCATGGATACAATATCCCTTGGGATCTCAACTGTATATATTTTAAAATTTTCTTCCGTCTTGTGTGCTGTTTTCTGTTTTCACAGGGTTCTTTTTTTTTTTTTTCTATTTGATCTTTGTTGTTGTTCAGTCACTAACTCATGTCCAACTCTGCGACCCCATGAACTGCAACATGCCAGGCTCCCCCGTCCTTACTATCTCCCACAGTTTGCTCAAATTTATGTCCATCGAGTTGGTAATGCCATCCAACCATCTCATCCTCTGTCCCCTCTTCTCCTTTTGCTTTCAGTCTTTTCCAGCATCAGGGTCTTTTTCAATGAGTTGGCTCTATCCAGTCATTCCAATGAATATTCAGGGTTGATTTGATCTTTGTTTTACCCTATCAGGATTACCTGAAATGTCTGTAAATACTTGGATGTGTATCATTGTTAAAAGAGTCAAAGCCACTCAGACATTCTTTGGAAGATTTCTGTACATGGGTTGCACTTGTGACACCGTCCTTGGTGGTGGGCTGGCCAAGCAGGGACCCAGTTTTGTTGGGGCTAGTGCCTGTAACTTATCTGGCTCTTCCAGATTCACAGGACTGGATGAGCTTGCTTCTTGGCTTCCCTCAGTGAAGGCAATTGATATTCCATCTTCTCAGATCAATAACAATCTGATTTCCAGCTTTCAAAATTTTGTCAGCTGATCTCTTTGCTTGGTTTCTTCTGTGAATTCAAGCACATCTTTTTGAATTTGTCCTTTTTAAAAAAAAATTTTTTTGCTATCATTTTTCATAAGTGACCTTCTGGAAGGAGACATAAATATATGGGTTTAAGACACCATGTTTATGCAGAGGTCTGGGTATTTCTGTGGAATACGTTCATTCTTCAAAATCCAGAGTGACTTTATAATGTAAATCGGATATCACTTCCCCATTTAAGTCTGCCCAGATGATCCAGCAGTTCCATTTAGTTGTATACCCAGGAGAACAGAAAGCAGGGACTTGAAGAGACGTTTGTATGCCATGTTCACAGCAGCATTATTCTCAATAGCTAAAATGGGGAAACAACCCAAATGTCCATTGATGAATGACGAGATGTCCGTCAATACAGTGGAATATTACTCACCCTTAAAAACGAAGGACATTCTGACAGATGACTCAGATGAACCCTGAGGACATTGTTAAGTGACATAATCCAGCTCCAAAGGACAAATACTGTTTGACTCTATTTCTTTCGGATTCCTGGAGCAGTCGAACTGAGACAGGAAGCAGGATGGTGGATGCCAAGGGCTGAGGAATTTAGTGTTTTAACAGGCACAGAATTTTAGTTAGGGACGATAAGAAAGTTCTGTAGATGGATGCTGGTGATACTCGCACAACAAAGAGAACGTGCTTAATATCCCTGAGCTGTACACCTAAAAGCGGTTACGTTGGTAAATTCTGCAGTATGTGTATTTTGCCACCGTAAAAACAAAGCAACCAGCAAACCCTGCTGGAGTTTCCTAATTCATCTGAACCAGACCCTCAAGTTATCCAAGGGTTCCACCTGGGCTTTCTCCGCAGGTGCAGGTGTAAGTACTTGGGTCGGGTCCCTGTCCAGACGGCTCAACCGGGGCGCCGTCCGAGCCCTCGCTCAACGGCAGAAACGAGTCGCACAGCAGGCCTCCGGCAGCAGGTCGACCAAAGGTCTCAGAACCACTGCCTACCACCCGGCTCCGCCTTTATCCCTGGAAGTCACCGCGGCGAATAAGGCGATCGCGGCGGCTCCCGCGCAGCCAGCCGGCCGGAAGCGTACGTCCGACGAAGCGTGTCCCTCGCCGCACGCCGTCCACACCCGAGCGCGCCTGCGCGGAGCCCGTGTGGGGTCGACGCGGGACTTGACCGGCATGGCGTTCCGGCAGGCGCTACAGCTGGCGGCCTGCGGCCTGGCCGGAGGCTCGGCCGCTGTGCTCTTCTCGGCAGTGGCGGTGGGGAAGCCCCGCGCGGGCGGGGACGCGGAGCCGCGCGTGGTCGAGCCCCCGGCGTGGGCGGGGACCTCACGCCCCGGGCCCGGCGTCTGGGACCCCAACTGGGACAGGAGAGAACCACTGTCCCTGGTCAACCTGCGGAAGAGGAACCTAGAGACTGGAGAAGAGGAGCTGACGTCCAGGCTGGACCACTGCAAGGCCAAGGCCACACGGCACATCTTCCTCATCAGGCACTCGCAGTACCACGTGGATGCCTCCCTGGAGAAGGACCGCACGCTGACGCCCCTGGGTCGTGAGCAGGCTGAACTAACTGGTCTCCGACTTGCAAGCTTGGGGTTGAAGTTTAATAAAATCGTCCATTCCTCCATGACCCGTGCGGTAGAAACCACTGACATCATCAGCAAACACCTGCCGGGAGTCTGCAAGGTCAGCACAGACCTGCTGAGGGAAGGCGCCCCCATCGAGCCCGACCCCCCCGTGTCTCACTGGAAGCCGGAGGCTGTGCAGTATTATGAAGATGGAGCACGGATCGAGGCCGCCTTCCGGAACTATATCCACCGGGCGGACGCCAAGCAGCAGGAGGACAGCTATGAGATCTTCATCTGCCACGCCAATGTCATTCGCTACATCGTGTGCCGGCTGCGCAGCGGGGACGGCCACCTCTAGGCAGCAGGAAGGCAAAAGGATCTACAGCACAGAGTTCTTAACTCACGGTCCAGGAAGGAAAAGGGAAGCACTTGGATCAGACCAGCTTCATCTCTTTCGCAGGGTGTCTGCCTCCCTCTCATCCAGGACGAGCCTGAGGGGTCCAAGCAGGCCTGTTTGAGGGACTGGATGAGGCCCCCCAGATGCTGTGACTGTGGGGACCAGGCAGACACGGCAGCAGGCTGTCTGCCAGCAGAGCCCGTCAGGCAGGAAGAAGAGGAGGAGGGCGCAGTGCTTTTTCCGTTTGTAACTTATTCTGCTTCGTATATTCGTTTCCTAAAACTCTTGTCACTTACATAAAGATTTTCCTCATCTGGTTCTTGCTTTGAAAAGCACTTTCTCACTCCAAAGTCACACCTCCCTGAAGCTGTGGGATCTGAACTTTTGTGTCGTGACGCCTTTCTGGATACACAGGAGGAGCACCTTGGCCGGTGAGGGAGGTGACTCAAGCTGCTGGCCTCGCCAGAGAGGCAGTGATGAATGCCTCAGGAGTGGCCCATTTCAGTAAAACGTCCAACTGACAGTTCAGTCCTTGTTTGCCTCTGGCTGTTAATCTTTCATGCTTATGGATTAAAATATTTAGTATGTCCTCCCAAATTTCTGTTATTTTAGGAGAAAGTACAGTTTTTATTAAGTGGTTATGAACATTTTCTGTAATCAGTGCAACTAATTGGAGTATTTGATGTTTCTGTCAATTTTGGAAATAACTACAAAATAAATTTTATTTTACTGGTTTTTCAAAGTACTAATTGTGAATGTTTCAAAACAAGAGGCCTGTGCATGACAAACAACAGCCCCAACTAGCAAAGAAAGTCTCAGCAGAAAGGCCTTTTCCCCAGTATCTTGTGTACCCCGGGCTGAAGTTTTGCAGGGTATCTGCCCAAGAGGGGCCTCGGTGAGAGGCCCTGACCCAGGACAGGGAGCTTAAGTGGTTTTCTAAAAGTAACAACCATGCACCAATCTGTAGAAATAGTTTTGACAAGTTAGCCAGGGGCTGTGCCAACGTCCAAAACCAGAAAAGTGCAAGGCAGCACCAGGTGTCTGGCCTCGGGTGCTGTGAGATCCCGTAGTCGAGCCCTGGGCACCCAGACCGTCAGCACCTGCAGGTCCTCCCTGTTTCCTTGGGTTTGTGTGGTCATATTGCTGTCCTGTCTGCAGACCTGTCTTTTCAGTGGCGTGTCCACCCTTTGCACTTGACTGCTGAGCAGGGCCAACGTTTCAGAAACAGGAAGTGAGCCCAGGAGCGGGAGAAAGGTGTCTTGATGGGGTCAGTTACAAGGGCCCAGGAAACCACCCTGAGGTGGGACATATGACCGAGAACTTACAAAATGTCAGGAAAGACATCCTAAATGTGACCAACATAAAAACCCACCCCGAGAGCCTGTGTGTCAGGAGGGATCCCAAACTGACAGCAGTGAGAATGAAAGTGGTTCTTACTGGCTGCATTGCTGTTTGTTCCAAAGTATCTCAAGACAGTTGAGGAAGGAACCCGAGGGCAGGTGTGACCCAGAGCTGCCTGCGGGTCTCCACACGGAATGAGAAACACGTGCCTCCGACTGCCTGAGCACACCTGGCTTGGGGATGGGATGGCGATGTGCCCAGTGACTGGCAACTGTACCCTACAAGACAGTCACCCTACAACCATCCTCTCTGAGCTGTGAACGCTTCTGGAAACATCCAAAAACTACCCCAGAAGATCTGGCTGCACGTGTGGAGCCTGCTCTCCCCCAGGAGAGGGGACCCTCTGGAGCCCCCTGCACGGTAGCCCACGGCACAGCCACCACCCACCATGATGAGGTTCCCATCACCTCTTTCCAACCAAAGACATTACACACTGATTGTCAACATCACAGAAAAAGGCTTCCTGTTTCATGGGACGCTTAGGAAATATTTGCTAGTTTAACTG EMBV3_04016 GCCTGTGTCTGTAGATTAGAGAATACATTGCAAGAACCGCTTCCCTTACCACTCCCCCAC Gene GeneID:514175|TMEM144:NM_001101989:60_cdna UTR3_Alt 3 NULL GeneID:514175 17 GENE TMEM144 MGC165857 transmembrane protein 144 EMBV3_26304 CCTATAAGTTGTTCAATAAGGAAAAGGAGGAGCCAGGGAGTACAGACCAGCACTCGGCTG Gene BVV0102_125220 + 0 NULL GK000015.2:64584161-64704078 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059827 TCONS_00059826 1 XLOC_036521 Coding TCONS_00059827 XLOC_036521 Coding Coding HIPK3 15:64677236-64757465 j TSS44815 3458 1 TCONS_00059827_5 1047 0.0338345864661654 16 0.957097272772598 1.03283536196664e-31 7.24446376244838e-29 7.56560179541383e-54 1.79267485141998e-33 0.000155326249580346 3.90755781263365e-05 7.9482533466928e-40 5.55632173064736e-06 1.26256086735809e-05 0.00130458330692536 1.19116808421591e-58 0.000822755556152676 0.000538105111891733 0.00071997718646949 7.11314514428277e-05 2.66674172521883e-57 7.96918974738754e-69 2.6362842081232e-12 2.75647147469585e-55 6.44361016253136e-37 3.37823966157492e-06 3.63463067433762e-27 3.75788609340849e-05 4.21243100892059e-05 8.5138442872264e-126 4.90409609562905e-91 4.06073408118516e-104 5.4056676330343e-05 0.000226531705825862 0.00013894899223901 XM_005216298.1 HIPK3 PREDICTED: Bos taurus homeodomain interacting protein kinase 3 (HIPK3), transcript variant X5, mRNA. 0.0 5616 99.97 0.901098901098901 NM_001278163.1 HIPK3 Homo sapiens homeodomain interacting protein kinase 3 (HIPK3), 0.0 4684 92.58 0.923366107576634 TCONS_00059827_5 sp|Q9H422|HIPK3_HUMAN HIPK3_HUMAN Homeodomain-interacting protein kinase 3; 0.0 1964 92.16 0.989493791786055 3 coding 1 1 1 1 -0.00436070094302723 0.974006211773027 0.0201713230573024 0.703568222628317 AGGATAAAAATAAACAGAGGAAATGAACATTTAAAAAGATTAACTCTGAATGATACCTATAAGTTGTTCAATAAGGAAAAGGAGGAGCCAGGGAGTACAGACCAGCACTCGGCTGGATAATCTTGGGTAGGTCACCTAAACTTCTTTGAATCCCTGCTCTACTTAAAGAGAGTTTGGACCAAGGATCTCTTAAGGTTCTTTCATCTATAAAATTCTATGGTTCTAGGATGGAACCATCCTAGAAGGGCCATTCTGTTGATTTCCTAGTCTCCAAGAGAGAGATAACTAGTTTCTGGGAGAGGAACTGACTGCCTTGATGGAGAATTATCAATGCAAAGGTATGGCCTCACAAGTCTTGGTCTACCCACCGTATATTTATCAAACTCAGTCAAGTGCCTTTTGTAGTGTGAAGAAACTCAGAGTAGAGCCAAGCAGTTGTGTATTCCAGGAAAGAAACTATCCACGGACCTATGTGAATGGTAGAAACGTTGGGAATTCTCATCCTCCCACGAAGGGTAGTGCTTTTCAGACAAAGATACCATTTAACAGACCTCGGGGACACAACCTTTCTTTGCAGACAAGTGCTGTTGTTATAAAAAACCCTGCGGGTGCTACAAAGGTTATAGCAGCTCAGGCGCCGCAAACTCAAGTGGAGGCACCTCAGATCGGGGCGTGGCGGCACAGGTTCAGTTTCCTAGAAGGCCCCCAGCGATGTGGATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAGGTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAACTACCACAGGAACCAAACAGAACTGTACCACTGGAGAAGGTGACTATCAGTTAGTGCAACATGAAGTCTTATGCTCCATGAAAAATACTTACGAAGTCCTTGATTTCCTTGGTCGAGGCACTTTTGGCCAGGTAGTCAAATGCTGGAAAAGAGGGACAAATGAAATTGTAGCAGTCAAAATTTTGAAGAACCACCCTTCGTATGCACGTCAAGGTCAGATAGAAGTGAGCATATTAGCAAGGCTCAGTACTGAAAATGCTGATGAATATAACTTTGTGCGAGCTTACGAATGCTTTCAGCACCGTAACCATACTTGTTTAGTCTTTGAGATGCTGGAACAAAATTTGTATGACTTTCTGAAACAAAATAAGTTCAGTCCCCTGCCACTAAAAGTCATTCGACCCATTCTTCAGCAAGTGGCTACTGCACTGAAAAAATTGAAAAGTCTTGGATTAATTCATGCAGACCTCAAACCAGAGAATATTATGTTGGTGGATCCTGTTCGACAGCCATACAGGGTTAAAGTAATAGACTTTGGGTCAGCCAGTCACGTGTCAAAGACTGTTTGTTCAACATATCTGCAATCTCGGTACTATAGAGCTCCGGAGATTATATTGGGGTTGCCATTTTGTGAAGCCATAGACATGTGGTCACTGGGATGTGTGATTGCAGAATTATTCCTTGGATGGCCTCTCTACCCAGGAGCCTTGGAGTACGACCAGATTCGATACATTTCTCAGACTCAAGGTTTACCAGGAGAACAGTTGTTAAATGTGGGTACAAAATCCACAAGATTTTTTTGCAGAGAAACAGATCTCTCCCATTCTGGTTGGAGATTAAAGACACTGGAAGAACATGAGGCAGAGACAGGAATGAAGTCTAAAGAAGCCAGAAAGTACATATTCAACAGCCTGGATGATATAGTGCATGTGAACACAGTGATGGATTTGGAAGGAAGTGATCTTTTGGCTGAGAAAGCTGATAGAAGAGAGTTTGTTGGTCTGTTGAAAAAAATGTTGCTGATTGATGCAGATTTAAGAATTACTCCAGCTGAGACTTTGAACCATGCTTTTGTTAATATGAAGCATCTTCTTGATTTCCCTCATAGCAACCATGTAAAGTCCTGTTTTCATATTATGGATATTTGTAAGTCCCATCCAAATTCATGTGATGCAAATAATCACAATAAAACTTCACTTTTAAGACCAGTTGCTCCAAGCAGTACTACTAATCTGGCAGCAAATTTTACTAAAATTGGCACATTAAGAAGTCAGGCATTAACCACATCTGCCCATTCAGTTGTGCACCATGGGATTCCTCTGCAGGCCGGAACCGCTCATTTTGGTTGTGGTGATGCTTTTCAGCAGACACTGATTATCTGTCCCCCAGCTATTCAAGGTATTCCTGCGACACATGGTAAACCCACTAGTTATTCAATAAGGGTAGATAATACAGTTCCCCTTGTAACTCAGGCCCCAGCCGTGCAGCCACTACAGATCCGACCAGGAGTTCTTTCTCAGACATGGTCTGGTAGGACACAGCAGATGTTGATACCTGCCTGGCAACAGGTAACACCCCTGGCTCCTGCTACTACTGCATTAGCTTCGGAGGGTGTGGCTGGTTCACAAAGGCTCGGAGACTGGGGGAAAATGATTTCACACAGCAATCATTATAGCTCCATGATGCCACAACCTCTTCTAACTAATCAGATCACTCTATCGGCCCCTCAGCCAATTAGTGTGGGCATTGCACATGTTGTTTGGCCTCAGCCAGCCACTACCAAGAAAAATAAACTGTGCCAGAACAGGAGTAATTCATTGCAGAATACCAATATCCCACAATCAGCATTTATCTCCCCAAAGACAGTAACTGGGAAAGATGTCCAGGAAGTAAGTTGTATAGAAACACAGGACAATCGTAACTCAGAAGGAGAGGCAGGAAATTGTTGTGACACGTCTATCAGGCAAGACTCTGATTCATCAGTTTCAGATAAACAGCGGCAAACCATCATCATTGCCGACTCCCCGAGTCCTGCAGTGAGCGTGATCACCATCAGCAGTGACACCGACGAGGAAGAGACGTCCTCGCAGAGACATTCCCTCCGAGAATGTAAAGGTAATCTGGACTGTGAAGCTTGCCAGAGCACTTTGAACATAGATCGGATGTGTTCATTAAGTAGTCCAGATAGTACTCTGAGCACCAGCTCCTCGGGGCAGTCCAGCCCATCCCCTTGCAAGAGACCGAACAGTATGTCAGATGAAGAACAAGAAAGTGGTTGTGATACTGTGGATGGCTCTCCAACATCAGACTCCTCAGGACATGACAGTCCATTTGCAGAGAGCAGCTTTGTGGAGGACACTCATCAAAACGCAGAATTGGTAACTTCTACTGACACAGAAACCAAACCAGCTGTTTGTACTGTTGTGGTGCCACCAATGGGACTGGAAAACGGATTAAATGCCGATGAGCATATGGCAAACACAGATTCTATATGCCAGCCATTAATAAAAGGACGATCTGCCCCTGGAAGATTAAACCAGCCTTCCACAGTTGGTAATCGTCAGCAAAAATCGACATCAGCATTCCAGCAGCAGCATTTGAATTTTAGTCAGTCTTTTG EMBV3_32748 GAACCAGTTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACCAAGGCC Gene GeneID:781410|LOC781410:XM_002684916:40_cdna Constitutive 0 NULL GeneID:781410 1 GENE LOC781410 NULL similar to histone cluster 1, H2bd EMBV3_28904 GAGCCTCATTGCTATGTGATGAGAGGAATGTCATCTGTAGCCAACCCTGGGATACTTTGT Gene BVV0102_038258 + 0 NULL GK000010.2:75921087-75953651 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017882 TCONS_00017888 TCONS_00017883 TCONS_00017887 TCONS_00017886 TCONS_00017884 TCONS_00017889 TCONS_00017885 1 XLOC_009135 Coding TCONS_00017882 XLOC_009135 Coding Coding PPP2R5E 10:75946796-76011760 j TSS12130 8245 1 TCONS_00017882_2 357 0.153305033353548 12 0.873266320828779 6.67357065954014e-17 0.000305081016641585 1.30493228412395e-12 5.84380315943514e-05 1.19623487641345e-06 0.000116251688167839 1.23736646442386e-05 8.00683826196666e-05 8.23343740567028e-05 7.5198224086648e-05 3.70204251818776e-15 2.34960713403091e-08 3.44968669809989e-05 3.0428267931546e-05 4.77140275633629e-08 3.15456132819473e-11 1.10875001051404e-06 0.00109196081808529 0.000228170836354748 3.33483262387689e-10 6.77808120704693e-11 0.000616557787083215 0.0002411094626796 0.000227177753150151 1.66582897348392e-25 3.03583141014919e-10 2.90126045918343e-19 1.84124304300713e-07 1.56159703376169e-29 6.97119916946739e-16 XM_005211994.1 PPP2R5E PREDICTED: Bos taurus protein phosphatase 2, regulatory subunit B', epsilon isoform (PPP2R5E), transcript variant X2, mRNA. 0.0 5665 100.00 0.380836870830807 XM_005267832.1 PPP2R5E PREDICTED: Homo sapiens protein phosphatase 2, regulatory subunit B', epsilon isoform (PPP2R5E), transcript variant X5, mRNA. 0.0 5263 89.33 0.470952092177077 TCONS_00017882_2 sp|A4FV68|2A5E_BOVIN 2A5E_BOVIN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform; 0.0 667 96.57 0.963585434173669 1 coding 0 0 0 0 0.788401544158723 0.0761050149241646 0.00481230110490433 0.919878823417297 GGACGCTATTCTATGCAGTTACAGTGATGAATAGAGAAGTGGTGGGGGTTAGCAGAGGAGGAACAACAGGAAAGACCAGAGCCTGAGGCAGAATTCAGGGAAGAGCAGTGCCAGGAGAGGACGGCAGGGGTGACACAGAGAAGAGAGGATGTTTCTGAGTAGAAATAGGACTGGGCATAACTATCTGGTATCTTGCAATATATTCAGAACTCTTCCTCCTAGTGACAGCAATGAATTTGATCCAGAAGAAGATGAACCTACCCTTGAGGCATCGTGGCCACACTTACAGCTTGTATATGAGTTTTTCATACGGTTTTTGGAAAGCCAAGAATTCCAACCCAGCATTGCCAAAAAATACATAGATCAGAAATTTGTATTACAGCTTTTGGAGCTGTTTGACAGCGAAGACCCTCGGGAACGGGACTACTTAAAAACAGTCTTACACAGAATTTATGGCAAGTTTCTTGGTCTTAGAGCATTTATCCGAAAACAGATTAACAATATTTTTCTAAGGTTTGTTTATGAAACAGAACACTTCAATGGTGTGGCTGAACTGCTGGAAATATTAGGAAGTATTATCAATGGCTTTGCTTTACCTCTTAAGGCAGAACACAAACAGTTCCTGGTGAAAGTGTTGATCCCTTTACACACTGTCAGGAGCTTATCACTCTTCCATGCCCAGCTGGCATATTGCATAGTACAGTTTCTGGAGAAAGATCCTTCACTCACAGAACCAGTTATTAGGGGATTAATGAAATTTTGGCCCAAAACATGTAGTCAAAAAGAGGTCATGTTCCTTGGGGAGCTGGAAGAAATACTGGATGTGATTGAACCTTCGCAATTTGTTAAAATCCAAGAACCTTTGTTTAAACAAATCGCCAAGTGTGTGTCTAGCCCCCATTTTCAGGTGGCAGAAAGGGCACTCTATTATTGGAATAACGAATACATCATGAGTTTAATAGAAGAAAACTCTAACGTCATCCTTCCCATCATGTTTTCCAGTCTTTATAGGATTTCAAAAGAACATTGGAATCCGGCTATTGTGGCGTTAGTGTACAATGTGTTGAAGGCGTTTATGGAAATGAACAGCACCATGTTTGATGAGCTGACAGCCACATACAATGAGAAAAAGAAAGAAAAGGAACGTGAAGAATTGTGGAAAAAACTGGAGGATCTGGAGTTAAAGAGAGGTCTTAGACGTGATGGGATAATTCCAACTTAACAAAAATATCAACAACAACATTACTAACCTGTGGAGTCACACATTTATGTAGTAGAAGATGGAGCAACAGTTTTCTGTATTGTGCAACTTTACAGTAGATTTCACATTTGTTTCATTATTACAACAGCACTGTATATACCTGTCTCTAAGTAAAGGAAAAAAAAAAAATAAGGACTTCAATCCAAAGTTTGGACAGTAGATGGACTTCTCAGAACTTGGCAAACATAATTATTGTTCTAACCCTCTTTTAAAAAAAAAAAGCAGTCTTCAGAGGTCTGTTGATGAAATTGCTATATTAAAATTCCATTATTGGGAGTTCCTTATTTATCATTAGCAGAGAGTATGAAACAATTTTCAAATGTGAACAATCTTAAATTTAGCTTGTCTTTCTGCTAAGCTGTTAAATGTATTTATAGTAAAGGAAGGAAAAAAAAAAAAGACTGTCATTTCCTTATAAGTTTGTATAACATCCTCCTCTGGATAACTTGACTGTAATTTGACATCTTTTCCTTTTGCACATCTTCATGAGTTGAATGTGGAATGGGGCTATGAAGTATAAAGGTCCCGTGTTAAAAGTTTTGTTTACTGGAATGAACATCCTTCCAGTAACCAGGTAGTGCTGGTACTCCTTTAGTTTTAAAATTAGGAGTAAAAGAGAACAGGTGATAAACATGGTAGGGAAGGGAATTTCGGATTCATGCCTGAGTTTATGGTGAATCCAGATCAATGTCTTGAATCCTTGAAAACAGGCACTGGGACAGGAGAGGGTTCAGCACCTGACCAGTATTAGTTATGTACATCACTGAAAACACATACCAGAGATGTTTTAGAAATGTCAGGAGACATCCTTTCGGACCATTTGGAAATAAGAAAGACAAACACTGAACAGTACAACCATGAAATTGATTGCCAGGATGTGAATCTAATTGGGAATAGTCAAGCAAACAGCTTGGACTGTTTGGAGTTGTTGCCTTACTTTTTCATATGTATTTATAAAGTATTCCAGCAAAAAGAGGATGTAGCCTCTGGGGAAAACAAACAAACATATTACAGTGTTTTTTGTAGATTCTCGTTCTGTATCCCATCACAGCGCCAGCCCTGTTTTTAGCCAGAAAGGATTCAGGATAAACATTATTATGCATTCTGAATTGGATGCGTATTCCTAACTACTGTATTTGTTACCAAAAGTGGTTCTACAAATGCTACTGAAAAAAATCTGGAAATTCCTAATGTCCTGAGTGTTAATAATAAAGTTTAAAAATGCTTTTATATCAAAGGTGCATTGTGACCAAATTGTTTAAGAAAACAAAAAAAACCACAAAATCTAGGGCTGTATTATAGATATATCTTACTGGCTCTCTGCTCTGTATTTGAAAGAGGAATCTTACATCTTGGGGTGTTAAAATGCTGATAAAACTTGTGTACATTGTGTACTTAACCTAATGCAGTTGCATTATCATGTACTGAAAGATACGTGTTTTGGGATTTATTTCCAGGATGCTTTTGCTTGTTATGGACATGGCAGCAGTGAGTTGATAATCCTAAACCATCCCTTCCAGAAGTATTCGTGACATGGAGCTGATTCTGCGTTCATGTGTTGAATTGTGATAGTAGCAAACAGGAACATATGAACTGTTGTTGCTCTTAATAGAAATATGGTATCAATATGGGCTTGTATAGTTTATTCCTTCCATTTAAAATATAAGATAGAATATGCAGTTTTATTCTTTATAAGAAAAAAGGAAAAAAAAAGAAGCCGCTGACCTTTCTCCCCTATCAAGTGTTTCAGGATTATCAGGTCACAGTTTGTGCATCAAAAGTCAGCCAGTTATGGACATTGTCATCTCAATAACTTTGTAAAACAAAAACAAAACTTGGCATTGTTAATTCTGAAAAAGAAACAGCAGTAAAAGAGTCGTATGCAATATCAAACACAACATGGTTTAGTGGAATTAATAGATTTTTTTTTTTTTAAAGAACTTTAATGGGGATTCTATGTAAAGCTGGCAGAGGCTGCCAAAGATGAAAGAACTTACTTTAAAAGTGCTGGAGCAAAGGTGCAAGTTCAAATGCTAAAGATAAAAAATAAATTTGTAACAAACCATCTCCTTCAGCCCTTTTGATTTTAGCCCATGGGTTTTGACTTTGCTTTATATTTAATTTTGACAATATGAACTTTTGTTTGCTATCAAGGTCACAGGTTTATGAACTATATCTCTGCCCATTAGAATGAAATGCAGTCATTTGAAATGAGAAAGACCAGGACTCTTTATTGCACCTTACCCTGTCCTCAGAGTTAAGGTGAAAGCTGTACCGATATCCTTGATGTCAATTTCGTATGCTGAGCATTCCAAACTGAGAAGAATAAAGCCAAATTTTAGACATATTTAAAGAAGCTATTATATGTCTAAAATTCATAGGGCAACTTCTGAGAAGAAACACTGTCTTTTCTACTTTAACCGAAAGTGACAATGTGACATTTGTCATGTTGGATCCAGTGACGCAGAGTAACTGAGGTAACCTGACTGTTGCACTGTGTGACATATTTAAGGACGTACTTGCTGCATTTGCAGCAGCCCTCTCTCTTTGTCCTTTCCCACATTTCTGCTGTTGCTGCAAGTCGAGTTAATTGTGACAAATGCATCTTTGTGTTATATTTTGTTTGCTTCCTAATTTCCAGAACTATATATAAATATATTTTTTAAATAGCAAATATTGTAGTTAGTGAGTGATGATCACTCCAACCTTATCCCTACCATATTGGTTTTAGGGGTAGGACTAAGAGTGTCTTTGGAAGAAAAACAAAAAACGAAAACAAAACCCTGTGGTTTAGAAGGATGCTGAGGCCTTAGGCTGTGGGCCTGGAACAGCCATGTGAGTGAACTGACCCATCTCATACTTTGAATCAAGCATGCATTCCTTTTCTCATTGTGCAAGTGTCCCCAGTTTTCCCTCAGTGTTTAGTTTTCGGCCTTTGAAATTTTATTATATTTTGCTCTCCCTAACATCTGTTTTTTATAAAATAAAATAAAAAATAAAAAAAGTGAGATATAAGTAATACCCTCAATGCCTCTGGATACTCACAAGCAGGGTTATACTCCTTCATCTTGGGCTCACTTGCCTAAATGGAAGGGTTTAATTTATTTTGTACCTCCTTCTATGCGTGGGACAGTCCAGGGTGCGGAGCCAGGAATTGCTCATAATTGCACCTGCTATACTTAAATGTATAGCCCTAGGCTCAATCACACTATGGAAAGAAAAAAAAAGTATATTTAGAGCTTTAAAAGCTTTTTTATTTTTTTGTGGGGGCCGGGGTGGGGGGTGGGTGGGAAAGGGAAGATGTATGGATGCTATTGGCATTTTTAAGTGTTCAGAGGTGTTTTTTTTCCCCCTTCTGTTTTGTTTTTTTCCCTTCAATTGGATGCACTGACCTGGCCCAAGAAATAAAGAGATTCTCTCTTTTGATGCTGTTACCAATGTTATGACAAAGTGACAGTCGCCTAGAACAAAAAAAGTGGCACCAGACATGATCAGTGATATTTATTTGCACATCGATATTTTTATTTTTATATTCTGGCTCAGCTGCTTCTCTGAGTGGAGTTAAGGAATGAGCCACAAAGAATTTTTGTAGTAGCTATATTGGGAACGCATTTTATATTTCTCAGTATTTAATTTTGAAACTCTAAAAGGATGGTGCATCTTGAGAGAAAGCTGAGCAAATTTTAATCTGGTGGAATGTTCGTTTGTGCTGCTTATTGTGCACAACTGCAGCAGTAGCATCTCTCTTGGAAATAAACATCCCAGATTATGACGTCTATGAATATAGGTTTCCTTTTCTACCCCACTCTTTCCCTTCCCTCCCCCGTCTTTCCTTCTTTCCCTTCTCTTTACTTTTTTGGAAATCACTTATTGTATATAAGTTGTAATCCAGACCTCATGTATCAGTGGGGAACTTTCAAATATAAATATTACCAATACATTTTCTGGTTGTTGTCTGATTTTTGATTGAGGTATAATGAGAATGACATGTCCATTGCTTTTGGTTTGAGGACTTCGCTTTAGCTTCATACATCTTTTGGTATTTTAGTATTTCATTGTTTTAGCAGGAGAGGGCAGCAAAAGTTCATTTTCCCTGTTAGAAATGCTGTGGTTCATGACCGGTTTTAAATTTAGTTGTGTGTGTGTGTTTTTAAACAGCATCTGTTTGTGGGTAGAGGTAAAAAATGAAACATTTTTGATAATGAAAATTTGCATATGAAAATTATAGACTGATTCAACCAGACAGTGAAGACTTCTGATCCACATGAAAGTCAAAAGGCCACAAAAGAATCTTCTGGCACTGGCTAAAATATGCTACTTCCTTTTCAAACACAACAAAATGCAAGCTGAATCTTAAAACACTTGGAGTTTAAAATGTCTTTCTTTGGAAATGATATACTTTCTTCAAAGTGGTAACAGAAACAAAAATGAAGGTGCTCCTGAAGGAAAATGTAACCTTCCCCTTTCACAGCTGTGTGAGAGGTTCTGTACTGTGGGTACATCCAATAAAGAAGCAGTGAAGAGTTTTCAGGCGCCTGGCTATGTGTGTGTGTTCATCTGTTTCTGACCTCCGTGACCTTTTTGAACCATACAAATGGTAGATTTGATCAATATAAATGTGAAGTTGGTATGTTCAGGCTTTCAACTTGAGAAAATCAGTTTGTAATTAGGGTGGGCTTCAGGATCTATTGCTGGATATGCAAATACCCCAAAACTTGGTGGCAAAATCAAAGTTATTTTGTTCACAAATGTACAATGTGGGCAGGACTTGGCAAGAATTCTTGTCTTTGCTATTCCAGTGTCAGCTTGGGTTTATCAAGGGGGACAGGAGTCATGGCTCACTTGCATGGCTGGCCAGTCGGTGCTGGCTGTTGACTTGGGGTTCAGTCAGAGACCTCATTTCTTCTTGACACAGACCTCCTTATGGGGGTGCCTTCCTTTACTTCCTCAAAGTATGAAAACTAGGAATGAACGTTTTAATCGACAGGAGGTGGATACTGCGAATTCTTTAAAACCTGGGCCCAGAAACTGTCACAGCATGATTTCTGTCATATTTTGTTGCTCAGACAGTGATGAAGTCTGCTCAGATACAAGTGCAGGGGATGTGAGCCTCACTGCTATGTGATGAGAGGAATGTCATCTGTAGCCAACCCTGGGATACTTTGTAAAGCATTTGATTTAGGTGTGGTTTACTCTCTTGGCTAATTAGATTTGGAACCACGTAGAGTTAACTAGTTAATGTTTCATGTTCAGTTAAACTAAGTTGGGAGGGGAAAAAAAATCCTTGTACATTCAGTAGTTTTGTATTTCAAAGCATGACAATTTTACATCTGAAGATCACCTTGGTAAGTTACTTACCAAGAAGAAACTTGTAACAAAAAATTTCAGGGTTCATAGAAATATGAGTTGATTTCCATGGAATGTCTAACCTTTTCTATAACATTGCTTCCTGTCTTATAATGAAGCAAAACAAATGTATAATCCAGATTTTGTTTGTTTGTTTGTTTTAGCCAAGACTAAGTATGGAAAAGTATGGAATAGTTGACCAAGACTGTAGGATTAGGGAATTAAAATTTGCTTGTTTCTGATTATGATACATGTTCATTGTATATTCTTGAGAAGGAAGATTTTAAGAAACAAACTGAATACCTATATGCTACTCCCCATATCAAAAAGACCATTAAAAGTCATGTATGTTCATTGATTGACTGGACCAATGTTAATTGATCACCTCTGTCCAGAGTTTTGCCCATCCTCCGTTGTTCCCATTTCCTACATCTTTATTGTCTCATTTAATTTTGTTCACAATCTGAATTAATTATACGATTTGAGTCAAATTTTGCTGCTACCAGATGATATGGGGCCTCAGAACCAGGATGGATATCAGTCACGGCCCCCTTTGTCCTCCCTAAAGCTCTTCAGGCAAGGTGTCTTCAGCCAGTGTCACCCAAGATGATGACCATGGACTTGGAAGACAGAGACCCCTGGGATCATTTGGCTTCTGACATTTATCAACGGTGTGACTTTGGGAAAACTGAGCTAAGCCTCAAATTCATTTGTAAAGTGGTACTTATTTTTCAGTGTTGTTATATTCTATTAGGCAGTATGTGTAAAATAGCATAAAGTGTGACACATGGTAACCTTAAAAATATTATGTTTGATGAATACTTTATTAAACCCAAAAGTTAAACCCACAGCAGAAGAATGGAAGTAATAAAGATTATTAAGCAGAAACAAAGTAGAGTATAGAAAAACAACAGGGAAAAGTGAAACCAAAAGTTGGTACTTTGAAAAAACCAGGAAAATTAACAAACCTGTAACCAGATGGACTAAATAAAAGAAGACTCAAATTACTAAAAATCAGAAGTGAAAGTGGAGATATCTTTGCTGATTCTATAGAAATAAAACATAAGAGCATTGTGAACATTTGTTTGCCCAAAAAAAAAAAAAAAAAGTTGGGTAGTCTAGATGAAATGATTCAATCACCATGAAATAGAAAATCTGAATAGACTTATAATTAGTGAGAGGATTGCATTGGTAATCAAAAATCTCCCAACAAAAATCTTGGCCCAGGTGGCTTCACTAATGAATTCTACCAAACATTTAAAGAAGAATTAATACCAGTGCCTCTCAAATGTTTTCAAGAAATCAAAGAGGAGGGAACACTTCCTAACCCATTCCTATCAGGTCAGTATAATCCTGATACCAAAAACAGATACTTTAAGAAAGTAAAACTAAAGACCCATATCCCTTATAGACATTGATAAAAAAATGTCCAGCAAATTGCTAGCAAACAGATTCAGCAGCATATTAAAAGCATTATCCATAATTAGATGGGATTTATTCCTGGAATGCAAGGATGGTTCAACATACAAAAATGAGTCAATGTAATGTACCACATCATCAAAATGAAGGGAAAAAACCCCAACGTAGTAATCTCAACTTATGCAGAAGAAGCATTTGAGAAAATTCAACACCCTTTCA EMBV3_00614 AGATGGTGCCTGCCAACACCCCTGTGCAAGTTATTGCTCCCCCAGAAAGGAAAATATCAG Gene GeneID:509723|ARPM1:NM_001038673:13_cdna Constitutive 0 NULL GeneID:509723 1 GENE ARPM1 MGC134508 actin related protein M1 EMBV3_25483 GAGGCGAACCACATCTTCGAGTTGATGCAGTGCCGAAGATTGTAATATTAGGTCCACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38282 GCCCTGCCACCATTGCTCTTGATTCCCTCAGCTGGGCCTGCTGCATGAAGAGCTTCACGG Variant GeneID:512976|C19H17ORF81:XM_002695784:295_cdna 390^498 2 EMBV3_20043 GeneID:512976 19 GENE C19H17ORF81 NULL chromosome 17 open reading frame 81 ortholog EMBV3_08094 CCTTTTATGTCTGTTAGCATTTGTCTTATGTATTGAGGTGCTCCTTTGCTGGGTGCATAG Gene BVT0102_069778 - 0 NULL GK000005.2:21119088-21546004 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166374 TCONS_00063544 TCONS_00254257 TCONS_00039848 TCONS_00098488 TCONS_00117033 TCONS_00070926 7 XLOC_101212 XLOC_038271 XLOC_157191 XLOC_023665 XLOC_058733 XLOC_071199 XLOC_042703 NonCoding TCONS_00098488 XLOC_058733 NonCoding NonCoding - 19:7918816-7919159 - TSS72864 343 1 TCONS_00098488_1 43 0.997084548104956 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00612048599059411 0.000146629570410302 2.52496074218707e-06 0 0 0 0 0 NM_001080352.1 ACN9 Bos taurus ACN9 homolog (S. cerevisiae) (ACN9), mRNA. 9e-15 84.2 79.00 0.288629737609329 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 9e-34 147 72.99 0.772594752186589 0 noncoding GTGTGAGTGGGGTCTCCCACTATTATTGTGTTACTGTCAATCTCTCCTTTTATGTCTGTTAGTGTTTGTCTTATGTATTGAGGTGCTCCTATGTTGGGTGCATAGATAATTTATGATGTTATGTCTTCCTCTTGGATTGACCCCTTGATCATTATGTAGTGTCCTTCCTTATCTCTTGTAATCTTCTTTATCTTAAGGTCTATTTTGTCTGATATGAGGACTGCTACTCAAGCTTTCTTTTGCTTCCCATTTGCATGGAATATATTTTTCCATCCTCTCAGTCTATATGTGTCTTTAGGTCTGAAGTGGGTTTCTTGTAGACAGAATATATATGTATCTTGTT TCONS_00092089 TCONS_00092090 TCONS_00092093 TCONS_00092094 . 3' 14776 TCONS_00092089 TCONS_00092090 TCONS_00092093 TCONS_00092094 . 3' 15118 EMBV3_40373 ACAGATATTTTACACTGGGTTTGCCAACAGGACTTCCCAGAAATCATCCTGAAAGCTACC Variant GeneID:508383|GNPDA2:NM_001075356:14_cdna 175^276 1 EMBV3_01608 GeneID:508383 6 GENE GNPDA2 NULL glucosamine-6-phosphate deaminase 2 EMBV3_11122 TCTGAAGACAGTTTTACTTGGTACTCTTGCTTCCGGGAGACAGTGGAGGAATGGAGTCTC Gene GeneID:613317|CALCR:NM_001076269:57_cdna Constitutive 0 NULL GeneID:613317 4 GENE CALCR MGC137260 calcitonin receptor EMBV3_02444 GGTGCCTGGATGGAATTTATTACTATTGGGTCATCTGTCTTGGCTCTTCCTGGCCACTCC Gene BVT0102_111319 + 0 NULL GK000030.2:118845129-118913738 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248129 TCONS_00248131 TCONS_00248128 TCONS_00248130 TCONS_00248132 TCONS_00253785 2 XLOC_151495 XLOC_156723 NonCoding TCONS_00248132 XLOC_151495 NonCoding NonCoding LOC618701 X:118860352-118983665 x TSS185627 2567 1 TCONS_00248132_4 96 0.386443319049474 3 0.979207214220838 0.00245402098818276 0.00179118698798697 0.00198217491272245 0.00235276477080833 0.00233562076546727 0.000953366517315163 0.00140359255147882 0.000858483829110986 0.00162414178232679 0.000178159124467136 6.47741399723293e-06 5.61703834923691e-05 0.000548598435096265 0.000290775935138493 0.000506133282502728 0 4.4804150411562e-12 0 0.00240981102312823 0.0020490993058076 0.000620903974089186 0 0 1.77783062199284e-09 0.00171959400417191 0.00261316218803582 7.68412164168464e-05 0 5.71155271343183e-10 1.71368781005491e-05 XM_005197659.1 LOC101904654 PREDICTED: Bos taurus uncharacterized LOC101904654 (LOC101904654), 3e-44 185 75.54 0.105570705103233 XM_005255919.1 HAS3 PREDICTED: Homo sapiens hyaluronan synthase 3 (HAS3), transcript 2e-28 132 71.79 0.0970003895597974 0 noncoding 1 1 0 1 -0.119980647982621 0.378237282551263 0.0601697306906847 0.225529886193396 CTCTTGGTTCTGCAGTCATCCTGGAAACACAGGCTCCTGGATTGGAGAGAGATCTGAAACCTTGCCTCCTGCATTGGTTGGCCTTGCAGTAAAGCTCTTTTCTCTAAAGCTCTTGCATTAAGTATTGACTTCTCTGAGCATCGGGCTTGAGCCCATGTTCCGTGAGTTTGGGCGGCCTTGCTGAGGTTTAGGACTTGTGACCATCTGCTTGATGCACTGTAGCCCCTGGTGGGCCCTCAACACCAACCCTGAGTGGCCACCTATACTGAGTTTGTCTAGAGAGTTGGCTCTCGGGTTCCTGTTTCCTAGCCATGGCACTCTGGGCTCCTCTGGCTTCTGGGGCTCCTTTCACTTTTAAGGAAGGAAACAGCTCCTGGATCAGACATCTTTGGGAGAGGAACAAAGTGCTCTGAGCCACAGATAGAGAAGCCCTGAAGGCTTTCCTACAGCTCCCACGAATGCAAGGGCTTTCCAGGGAGACATCAAGTTCCTGATAAAGAGTTCTGGTTGACAACGACTTCAATCCATGAAGGCTGGGAAGAGGCAGCATGCATTGGTTAAAGACAGTAGGTCCAGGCTCTGTTTGCTGGCCAAAAGGTAAACTATTTTGAGCACCACAGTGGAAGAAATTGATCAGTCAACTGCAGAGCTCAGTTTGGGCTGAGGAGTGGCCAGGAAGAGCCAAGACAGATGACCCAATAGTAATAAATTCCATCCAGGCACCAAAACGCCAAACTTCAAGCAATAGCCGGAAAAGAGACATGTGAAGGAAACAAAGCCTCTGATAATCACCTTTCTTAAATACCAATTAATCCAACCTTGTCAGTGCTTATGTAACACTCCAGTCCTTGTGGTACAAAACTCTGGGACCTGGGATTATCATTTTCTACAGAATTTGAGACTCATTAACCAAATTGAGGATGATTTCCCACAAGCTTGAAGAATGTACAAAGAGAAATGGGAGGATTGAAGCATAAAGCATTGACCAGTTTAAAGTGGTTTTGCCTCCTTAAAACAGGTTGTTGAATAATCAAACCTTGAGTTATTTATAGAGGCAGCACTATGCATGTGCCAAAAAGGAGCCTATGTTTCCAGGATGACTGCAGAACCAAGAGGGTTCAGTCTGTGGAACTCTCAGAGTAGGAATGTGGCCAGGGGAGAACTTTATGAAGTCCTTCAATGTGGAAAATCTGGCTTCTAGCAGCATGAATAGCTTACATGAACTAATTCAAGACTAGCCAATTAGCTTCCAAGTTTGCGGTTCCCCTAAACCCTTTCATTTTACTTCAAACTCTGGATTGAGGAGACAGATTTGAGAGCCCTACTTCTGTCTTCTTGCTAGTCCACCTTGGATTAAAGTTTGTCTCTCAAAAGCCCATTCCATAGTTTGGCTTCTATGTGCATCAGGCAGTGAGCCCTCGCTGGGGAACACTAGTGCCTGATAGGCCTGGAGTTAGATTCCTCTCTGAATTCCTCTAGATCTGACGCTGTTATACTCTTCTTGCTCTAAAGCAGAACTTGTGTTCCTTAACACTCAAATGTATCCTGGGATAAAAGTAAGGACTCTGGATATATTCCAATACACTTCTTTAGGCACAAAGCGTTGAAGGCTACATCAATAAATGACAGGAATAAAGAAGAGAAACAGATGATAGGGACCATAAGATCGTCTCTCTGTGCAGTGTCAGATAACCTCATTCAGAATAGCACAAAACCATCTTGGATGGCTTTTTTCCTTTAGAATTGTACTCATATCTCAAATATAGTGACTTGGGTTCTAGATCACTGATATAAAGTGAAAATTGCCATAGATAAATCATTAGGAATTTGGGGGATTCCTAGTGCTTATAAAAGTTGTTAAGCCTATTGTACACTTACTAGAAGATGTCTAAAAAAATGCACATAGCTTAATTTACAAATGTAAGACAGTTACAATAGTAACAAAGACAACTGATGAGGGCACCAGAAGAAATGAAATAAGGAAAGAGTTTAAAATATTTAAAGAATTAACAATATGTGGAACAGGGACCCCAAGTGAATACATGATGTTGGGAAATGATGCCATAGACGTGTTTAATGCATGGTTACCATAAACTTTCAGTTTGTAACAAAACACAGTATTTGTGACACATGATTACGTGCAGTACAATGTTTGAAAAGTATGCCTGTCAATCAATTAAAACAAGTCGTGAAAAGAGACTGACTCTGGCTTTTGAAAAGGACGGAGCAGCATTTTTCTCTGGGAGGACACCCCATTTTGCCCCCTGCCTTCTGTGTTATTTTCCCCATCTCAGGTCAAGTCTGGGACATGAAACTGTAAGGTTTGCATTAGGGACACTGCTGAAGAGTTTGCCGGAATGTGGTGCTCCCCAGGAATCCTTTAATCCAAGAGATAGACAAAATTTGGGCTCCCATAGGTGAGGACTGGAGAGACAAGCACCGTAAAATACAGGTCATTCAGAGACCTCCCAAACTTGCTCTCAGGCCTAGAATGCCCAGACAGGACATTCCATCTTATAAGCCTTGTAGCTCTCTGTGAGGTCAAAGTCTCAGTCTAAGAAGAATGG TCONS_00245585 r 3' 15225 TCONS_00248134 s 3' 11215 EMBV3_39014 GGAGTCACAGACTTCGTCGGAAGGAACGTCCATGCTACCCATTCAAGAGTGATGATAGTG Gene BVV0102_095368 + 0 NULL GK000001.2:117835979-118097063 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10987 TCTGTGGGACCCAGTGATGCCAACTCATTTGGGAAGGGCCATGTACTCTCCAGCTTACTT Gene GeneID:521222|METTL4:XM_002697734:217_cdna Constitutive 0 NULL GeneID:521222 24 GENE METTL4 NULL methyltransferase like 4 EMBV3_29225 CCTGAGTCTGAATTGGGCACAAGGGGACATTTCTTTGGAGATTGTGGATGGCCTAAGTGG Gene GeneID:537320|ADAD1:XM_002694395:29_cdna Constitutive 2 NULL GeneID:537320 17 GENE ADAD1 NULL adenosine deaminase domain containing 1 (testis-specific) EMBV3_13842 GTGAGAACTCCTCCAGGTCTCCTCTAAATAAACCAAATAACATCAGGTCGAGAGCTGCTC Gene GeneID:281492|SMN1:NM_175701:60_cdna Constitutive 1 NULL GeneID:281492 20 GENE SMN1 SMN survival motor neuron EMBV3_29756 GTATTTTGGCTGCTGGGGTGCAGCGTTTGTGACACGTATTTTAAATTTCCTTCTGCACTG Gene GeneID:524813|FOXF1:XM_002694754:507_cdna Constitutive 0 NULL GeneID:524813 18 GENE FOXF1 NULL forkhead box F1 EMBV3_21266 AAACAGCCGGAGGCAGAAGCAGTTGCTGAACCAGAGGTTTGAGGGCCTGTGTGCAGTACT Gene GeneID:535320|TRIM54:NM_001017951:177_cdna Constitutive 0 NULL GeneID:535320 11 GENE TRIM54 MGC137273 tripartite motif-containing 54 EMBV3_25582 GTCCTCAACACTTAGCAGTCATAAACTGGGAAAGAGGTGGGTGGTCAGCTTCTTTGGGTG Gene GeneID:510525|MGC128929:NM_001034386:82_cdna UTR3_Alt 2 NULL GeneID:510525 10 GENE MGC128929 NULL proline racemase-like EMBV3_24334 ATACACAATGGCCCAAGTAGGTTTCCCAAGAAAGCATGGTTAGTTTATAATCAGGAAAGC Gene BVT0102_358957 + 0 NULL GK000023.2:50453798-50487432 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35045 AGCCAGCGGCTCCTCTCTCATTATTTTTCATTAGCAAAAGCGGCACAGCCTCACCACGAC Gene BVV0102_422894 + 0 NULL GK000004.2:118009583-118042854 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185494 TCONS_00185492 TCONS_00185493 1 XLOC_111602 Coding TCONS_00185494 XLOC_111602 Coding Coding CNPY1 4:118039932-118050634 j TSS137896 3380 2 TCONS_00185494_2 128 0.0801775147928994 4 0.684515465844314 1.66941960040178e-05 2.59764285011794e-08 0.000344919167036975 0.000177433733684433 0.000331728934032503 0.000189951127012137 0.000239743717528839 5.41667273168018e-05 0.000242571325548937 8.45672181469097e-06 0 4.18234416060213e-06 2.60339616488834e-05 3.28910854073798e-05 4.80149018813912e-05 0.000447714982720186 4.68344532466397e-06 0.000155552022361247 0.000431955326635157 1.84276168244714e-07 0.000158929430570099 3.50244314545234e-05 0.000200729141895884 0.000357526541405103 1.72298875184705e-08 4.40694501956053e-09 3.36582359374949e-09 0 1.1421540381333e-05 1.59265189810506e-05 XM_002687055.3 CNPY1 PREDICTED: Bos taurus canopy 1 homolog (zebrafish) (CNPY1), mRNA. 0.0 2075 100.00 0.339940828402367 NM_001103176.1 CNPY1 Homo sapiens canopy FGF signaling regulator 1 (CNPY1), mRNA. 4e-170 603 74.00 0.295562130177515 TCONS_00185494_1 sp|Q3B7I2|CNPY1_HUMAN CNPY1_HUMAN Protein canopy homolog 1; 2e-52 163 84.78 0.989130434782609 1 noncoding 0 0 0 0 -0.0664337126700527 0.686150838094113 -0.016688885439464 0.744107218413436 TTGACATCCAGGAAGTGCTAGGAGCCTCTTCATATGGACCAGACCAGGAGAGACACAGCATCACTCGCCTGGCAGAGTGAAGACCATACTCATTCTGTTCACGATCTGCTTGACTAATTATTCCCTTAGCCCAGTCGGAGGCATTCCTCACAGACCTCCTGGACAAAGTGTGCGAGCGGATGAATGACTACAGACTCGAAGAAGACCCCGTGACGAAGGAGAAGACTTTCAAGAGATTTGCTCCGAGGAAAGGAGACAAAATATACAAAGAATTTAAAAAATTCTATTTTTATTCAGATGCTTACAGACCGTTGAAATTCGCGTGTGAGACTATAATAGAAGAGTTCGAAGATGAAATACTTTCACTTATCACCCAGGAGGCACACCAGCTCGCTGACACGCTGTGCGGTGAAAAGTCAGGTCTGTGTGAAACTCCCACTAACCACACTGAACTCTAGGAACACCCGCGCTGCTAGCAGAGAGAAGTCACGTCACAGCCCCCAAGGTCAATGTCCGCGTTTCTGTCTTCATGTTTCTTCACGAGAAGAAGCGCTGTGTCTCTTTTTCATACTGCAGGGCCTTGTGTTTGATACTTTATTGAATATCTCTTCTTTGGCATCTTGCAAGCCCCACTTCCTTCTCCAGGCACAGTACATGAAACAGTTACCTTTGTGGATTTTGGTATTTACAAACAGGCTTGGCAGGAAAGCATCTAGTTTAGTAATAGGACAAACGTGAAGACATTTCATAAATGAAATAAGGATTTAGTAACGTGTGCTGCATAGTCCATGCACATATAGATAGAAGTATAGTGTCCTGTTTGATAAGGACTTGGTTTGATTTCACAAGTACTTGATTAGTCATGAAATTAAGAAAATGCATTGCCAAGTTCCAGGCTAATTTTCCTGGGCTGTATGGCTATCACCGAAAGAAACGAATTCACTTTATGTCAGGAATGAAATTTAAATTTCTAGAAACCTTAAGTTTAAATACTTTCTAATTCCTAAAATTTAACCAAATGCATAAAAAGCAGTGAACACTTTTATAGTGAACAATTATATTGGCCTTTCTAATGCACGCCTTCTGAATTGAAATGATTTAGAAAGTTGATTTATTATTCATGTATTTATTATCATGTATTCTTAAAGGCTGACACCAATAGACACGTTTATTTTGCTGCAGACTCTCCTGTCATGCTTTGTTTTTTAAAGATTTTCACCTAACATTTAGCATGTAGATTTTACTGCTGCTGCTGCTGCTGAGTCGCTTACAGTTGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGATTCTCTAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCATGAATGAAAGTGAAAAGTCAAAGTGAAGTCGCTCAGTCGTGTCCGATTCTTCGCAACCCCATGGACTGCAGCCTACCAGGCTCCTATGTCCATGGGGTTTTCCAGGCAAGAGTACTGAAATGGGATGCCATTGCCTTCACCAACTATTGTTCTGTCTATGGATGTTTTTGTAGGTGTGGAGATGGAAGGAAAGGTGGAAACTTACAGAAAATTGCCTTTTGACCACCTTAATAATGGAGTGTAGTAATCTCACTCTTAGAGATTTCATTGTCTTTGGGAATCTAATTTCTTGGAGATTTCACTGTCTCTGTTAAATTTACATTTAGTGGAATAAAACTTTAATTGTTTAAAATGTCAGGGCATGCTTCACACACACGTTTTAAAGAAGAAATTCTCGTTGTTATTGCTGAGAAATTTACGAAGTGGGTTGATGTTCCGCCTCCCAAAGCAGAAACTAGTTGCCATGTGTTCCATGGTTACCTAGAAAGCACATTACTTAAACCGTTCAGCTGACACTTCGGGAGAAAACAATTTGTAAGTTTAGAAAAATTGGCCAACCTGAAGAGAAGGAGGTTTCCTTTCTCCCTTTCCCACCTCAACTTGTGTTAAAAGTCAGGCTTCTGTGTTAACGTCATTCATTCACTGAGAAAGTTTCTGATTTCTTAGCGGATTCAGTAGTGTGTGGAGCCTACATATTATAACCCGATGCGTCTGTACCGCCTGCAGCTGACAACAAATGGAAATGGGATTTAAGAATCATTCGCGTCATTTTTCAGGATGATGGGAAAGCTGCCTTAAAACATGGTGCCTAAAACTTTAGTAAACTCACCTATTCAAGTTTCGTTCACGTATCAGATAATAAGCCATAAATGTTTTCCTACCTTTGACTTCCTTGGTAAACACACTAAACTGTTTCTTCACAGGAACACGACAGAGACACTGGCAGGAAGTCCCTGTTGAAACCGTAACACTTGTGTGTGTGTGTGTGGGGGGTGTTGCTGGCAAACCCTCACACACAGACAGTGCCCGTGCCAGTCATAGAATTTAAGAGAGTGTGGGCTTTGGTTTCCACCCTGAGCGGCCGTGGGGAGGCCTGCCTTCCCTCCACTGATGGTGTTTCTCGTGGATGTTGATGCTTCTGCTGTGACGAGAACCACACGCTTCGCCTCTGATGGTGAATATCTCAGGTTTTGCTCAATATGGCTATTCAGTTTTTTTCTTATTTCCTAGTAAAAATAATCTTGTCTCTTAACAAGATTTTCAGTATCTCATGACTTAGATATTTTTCTTTCCAGATCAAACTTGTTAAACTCATGTAAACATTTGTGATTGCTGATTAAAACTACATTTGAGTCCTGGATATGAGTCACTGCGTTTCTTACGGCTGTGATGACTCTTAGGTTTCCCTCTGGGTCGTGGTGAGGCTGTGCCGCTTTTGCTAATGAAAAATAATGAGAGAGGAGCTGCTGGCTCCGTCTTCCCTCCAACCACGTTTCTGCCTTTTAATGACTTTTATTGACCAAAAACCAAAACAAAAGCAAAAAGCCAGAAAAAAAGGAAAAAGCAAACAACACCTAGGGTGTAACAGAAAAGTTTCTCAGAGCCCCTGAAAAGCAACCAAATACTGAGAAGAAATTCCCAGAGAAAATGTTGGGGGAGGTTTACATTACTTATTAAAATAATGAGGAGAGAAGATGTGTTTGAGGTGGATGGTTTCAAATTGCACTTGTATGAGATGGTTTCTTTGGGTCTCCGTGGAAGACGTCTGTGAGCCTCTTCTCATAAGAGAAGGACCACATGGGCTGAGATGCACAGCTTATATTTTGGTACATGGATTACTATTTGCAAAGAATAAGCCAAGACCAATGAATCTATTTCACTGAGAAGTGGAGAGTGGAATAGAGCAGAGTCCCAAATGGGAGCAATCGATACTTGATTTACTAAGACAAGCCCTAAAAAAAGAGAGTCAATAGCTGGTTATATTTTTTATACCTCTTTCTC EMBV3_23962 GAGGCTTCGTACTAATGGAGAAAACCTTGTAGCGGAGTCAAAACCTCAGAGCACGCTCGA Gene GeneID:100295892|LOC100295892:XM_002688063:19_cdna Constitutive 0 NULL GeneID:100295892 6 GENE LOC100295892 NULL hypothetical protein LOC100295892 EMBV3_30001 AACACCTCGAACCCCAGTGCACAACAAAAACAGGGAAACTGATAAAGGGGCCGTCCTCTA Gene GeneID:100299483|LOC100299483:XM_002691737:45_cdna Constitutive 0 NULL GeneID:100299483 12 GENE LOC100299483 NULL hypothetical protein LOC100299483 EMBV3_22049 GAGTATTGTTGAAAAGAACTAGAAACCAGGAACACTGGAGTTTATCACAGTTATATTGCC Gene BVV0102_022813 + 0 NULL GK000015.2:6551325-6639728 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060500 TCONS_00060502 TCONS_00060501 1 XLOC_036756 Coding TCONS_00060500 XLOC_036756 NonCoding Coding - 15:6583634-6585798 - TSS45231 1847 2 TCONS_00060500_3 78 0.159718462371413 2 0.147018030513176 0.000663805580625277 0.0012615275140173 0.0013663450967231 0.000478214852354962 0.000439001204323898 6.63788160833833e-05 0.000270633697190311 0.000965918312076429 0.000569897553298195 0.000541628341822577 0.000199283170938423 6.43416918850039e-15 0.000111192501249565 1.94460433486576e-10 1.07974211895262e-07 0.00363071703013098 0.00419991432788696 2.40725719942544e-08 0.00128899341118635 0.00109152056914629 0.000458054368169069 0.00160659340313762 0.00113040650829597 0.000309499331519531 0.000943753569841688 0.00112070218152342 0.000486050498322287 0.000150168689613919 0.000150439192126252 0.000604347621197914 XM_586393.5 LOC539314 PREDICTED: Bos taurus baculoviral IAP repeat-containing protein 2-like (LOC539314), mRNA. 0.0 2554 100.00 0.76610720086627 NM_001166.4 BIRC2 Homo sapiens baculoviral IAP repeat containing 2 (BIRC2), 1e-59 235 75.21 0.193286410395236 0 noncoding GTCCCTGGAAGAGCAGTTGAGAAGGCTGCAAGAAGAAAGAACTTGTAAAGTGTGTATGGACAAAGAAGTTTCTATTGTATTCATTCCTTGTGGTCATCTGGTAGTATGCCAGGAATGTGCCCCTTCTCTAAGAAAATGCCCTATTTGCAGAGGAGTGATGGATCTGGTATTCTTTCTGAAAGCTTTGAGTACTACTTTAGAGTACAGTTGAAAAGAACTGGAAACCAGGAACTCTGGAGTTTATCACAGTTATATTGCCAAATTCTCATTGGTTCTTTTTCAGTTGTGTTGTTTTTCAAATAGTGGTACAGTGTTGAGACAAGGTCCTGGTTCCTACTCAAAAAAAATATGCATAACAAAGTCTTTGAGTTCCACAGAACTGGGGCCCCCACCCAGGTGGAGGATGGTAACATCAGGCTGAACACAAGATTCCTGGAGCACCGCTCCGTTGCCTCACCAGTAACCAATCAGGAAAAAATCATACACCCTGAAGCCCTCATCCCAAATGTTGCCTCCTGTTTCTGGGGACCAGTGATGACCATCCTATTAGGTCTCCTGTTTGGCCCCTGTCTATTTCATCTCTGAGAGGAGCCAACAGTTTCAAGCTAAATTGCTGTTATTACAAGGTGAATGCTGGTTTCAGGCACAGAATACCTCAACTTAGATCAGGTAGAGAGAGACTTCTGCTTTGTTAGGCAGGCCTACGCCCATGCACAGCAGGAAGAAATTACAGAAGGAAAAGACCTCCGCTCCAGTTCCCAAGAAGGATCTTGATTTTGAAGTCTCTCAGCAGGGAGTTAGGGGAAGCAAACTGACTGAAACCGCCCACCCTGGCCAGGCACCATAATAACCATTTGCAAGAGTTGTTTTACAACAGGAGATCCTGGTATGGAACACGGAACTAGTAAGCCACCACAAACCGGAAGGGTTCAGGAAAGGTCAAAATGAGACACCACATGTCCGACAACCTCCCAGAATCCTCACATCTGGCATCCATCTTGGCTGAACCAGGCGTGCACCGCCAGGAAGGACTCTGAGCCAGAATGATTTGGCTAAAAACAACCCGGAAACTAATCCCATCACCGTAAAACCCGAGACTGCCAGAGCAGTTCTCCTGGGTTCCTTCACCCTACTGCTCTCCACTTGGGCGCCCCTTCCTGATAAAATCTCTTGCTTTGTCAGCAAAAAATAAAATGGTGTCATATATAATATTTAATCTGTGTTTATATGAAAAGTAAGCTTTATGTTTGAGCTGTGTTAGTGTACATATGTGTACACAGGAGAAGTTAAAGAAGCAGTGTTAATGCTGTTACGTATCATTTTAGGAGTGACTGGATCTGGTATTCTTTATGAAAGCATTGAGTACTACTTTAGAGTATTGTTGAAAAGAACTAGAAACCAGGAACTCTGGAGTTTATCACAGTTATATTGCCAAATTCTCATTGGTTGTTTTTCAGTTGTGTTGTAAGATAAGGATTTTTCTCTTAGTGGTATAAAAGTTTTTCCCTAGTTTGTGAGAAACATCTTAATAAAAGGTCTTTAAAAAGACTACATCAATTCACATCAGTTTTGTTGTTGTTGTTCTGCTTTATAATTTCCATAAACTTTCATAAGGTTATATAAGAATGAGATAATATACATAAGCATAGTACTTGTCACATTGTAAGCAGTTCAAATGCAAATTATTAAATTAAAAAACTGAATTCATAAAACAAATTACCAAAAAATGTTTTTTTAATAATAATGGAATTTATGAGAATTTCTTTCAGATGACAGTATCTGTCTAGTTGCTTTGTATATTGTAGATACTATTTGAATTAAAAATCCATGTCAAACATTCTTAACAA TCONS_00060505 TCONS_00060506 s 3' 20799 TCONS_00060505 TCONS_00060506 s 3' 20330 EMBV3_12975 TATGCAGGGAGCTTACCTCTCCCAGTACACCCCAGTGCCTTCTTCCAGTGTTTCAGTTGA Gene GeneID:509798|RBMS2:NM_001034365:971_cdna Constitutive 2 NULL GeneID:509798 5 GENE RBMS2 MGC128164 RNA binding motif, single stranded interacting protein 2 EMBV3_41839 ATCTGGCCGTGCAACGCGAAGGTGGCAGCGGCATCGATTACTTCCACGCGGTACTGCACT Gene GeneID:790851|LOC790851:XM_002683898:3_cdna Constitutive 0 NULL GeneID:790851 Un GENE LOC790851 NULL hypothetical LOC790851 EMBV3_41869 CCGGTTGGAGCCCCCAGAGCATAGGAAGAAGTACACGCTGCTATGTGGGAGTCCCCCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34269 GATAGGCTACAGTCCATGAGGTCGCAAAGAGTTGGACACAAATGAGCAACTTCCCCTTGC Gene GeneID:511650|AGGF1:XM_002690418:107_cdna UTR3_Alt 2 NULL GeneID:511650 10 GENE AGGF1 MGC157060 VG5Q angiogenic factor with G patch and FHA domains 1 EMBV3_00192 GAGCTGGAGAAGAAAAGACAGGAGATTTTAGTCAAGGCCAAGCAGAGGCGTCGTGACAGA Gene GeneID:518772|MBD3L2:XM_002688831:129_cdna Constitutive 0 NULL GeneID:518772 7 GENE MBD3L2 NULL methyl-CpG binding domain protein 3-like 2 EMBV3_18663 TTCTACCGCTCCAATATCCTCTCCCACTCCTTCTGCCTCCACCAAGATGTCATGAGCCTT Gene GeneID:527918|LOC527918:XM_002693316:172_cdna Constitutive 0 NULL GeneID:527918 15 GENE LOC527918 NULL similar to 51H5 olfactory receptor protein EMBV3_02300 CATGGAGGAAATTGACAAAGAAATCAGTGAGATGAAGCTGTCTGTCAATGCCCGTGCACG Gene GeneID:539459|ARPC4:NM_001076163:190_cdna Constitutive 0 NULL GeneID:539459 22 GENE ARPC4 MGC139730 actin related protein 2/3 complex, subunit 4, 20kDa EMBV3_37595 GAGTACAGGGGACATTTCCAGACTGTTGCGTCCTGTATCTTTCTACCCAGAGCTTTAGCC Gene GeneID:528277|WDR31:XM_002689937:92_cdna Constitutive 0 NULL GeneID:528277 8 GENE WDR31 NULL WD repeat domain 31 EMBV3_13059 TTTGGTGTCAGGAATGTTTCGGTACCACTGTTCTCACGGGAACCACCGATGTATCGGCAG Gene BVT0102_001819 + 0 NULL GK000001.2:22300234-22314191 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000255 1 XLOC_000071 Coding TCONS_00000255 XLOC_000071 Coding Coding HSPA13 1:22290096-22302510 = TSS132 4369 1 TCONS_00000255_2 471 0.059510185397116 5 0.648433094336583 0.000191270767191488 0.000190670995600298 0.000149704128816229 0.00032061115495636 0.000110130729518014 2.29821315239379e-05 6.42745401427819e-05 8.76490553660241e-05 0.000401736918474666 0.000327941277177386 0.000149035526878046 0.000107679595036472 3.27541643248471e-05 5.18529176207796e-05 1.42357292409252e-05 0.00707024396210144 0.00459624400623717 0.00344500855014488 0.000341642077010842 0.00072024438632567 0.000101037820652385 0.00214916874135874 0.00266167964733194 0.00332988254303359 0.000281654327819 0.000226957441488729 5.02230622371848e-05 0.000188004136837903 0.000283531743393437 0.000625562640956066 NM_001038505.2 HSPA13 Bos taurus heat shock protein 70kDa family, member 13 (HSPA13), 0.0 3732 100.00 0.473334859235523 NM_006948.4 HSPA13 Homo sapiens heat shock protein 70kDa family, member 13 (HSPA13), 0.0 2650 85.56 0.527580682078279 TCONS_00000255_2 sp|Q2TBX4|HSP13_BOVIN HSP13_BOVIN Heat shock 70 kDa protein 13; 0.0 962 100.00 0.997876857749469 2 coding 0 0 0 0 -0.0129452996624083 0.935892870477676 0.0157483341735983 0.769483800344684 GGGGGCGGTGCCTCACGTATGTTACAGTCATCGCAAGCCTCTTCGGCGGGACTGTGATGGCCGGAGAGATGACGATCTTAGGATCAGCTGTTTTGACTCTCCTGTTGGCTGGCTATTTGGCACAACAGTATTTACCATTGCCTACTCCTAAAGTGATTGGAATTGACCTTGGCACTACGTATTGTTCAGTTGGGGTGTTTTTTCCTGGCACAGGAAAAGTAAAGGTCATTCCAGATGAAAATGGTCATATCAGCATACCCAGCATGGTATCCTTCACTGACGACGATGTTTATGTGGGGTATGAAAGCTTAGAGCTTGCAGATTCGAATCCTCAGAACACAATATATGATGCTAAAAGATTCATAGGCAAAGTTTTTACCCCGGAAGAACTGGAGGCTGAAATTGGGAGATACCCATTTAAGGTTTTAAACAAAAATGGAATGGTTGAATTTTCTGTGACAAGTAATGAAACCATCACCGTTTCCCCAGAATATGTTGGCTCTAGACTGTTGTTAAAATTAAAAGAAATGGCAGAGGAGTATCTTGGAATGCCAGTTGCCAATGCTGTTATTTCCGTACCAGCAGAATTTGATCTAAAGCAGAGAAATTCAACAATTCAAGCTGCTAACCTTGCAGGACTGAAGATCTTAAGAGTAATAAATGAACCCACCGCAGCAGCTATGGCCTATGGTCTCCACAAAGCTGAAGTCTTTCACGTCTTGGTGATAGATTTGGGTGGAGGAACTCTCGATGTGTCATTGCTAAATAAACAAGGAGGAATGTTTTTAACTCGAGCCATGTCTGGAAACAATAAACTTGGAGGACAAGACTTCAATCAGAGATTGCTTCAGTACTTATACAAACAGATCTATCAAACATATGGCTTCCTGCCCTCTAGGAAAGAGGAAATCCACCGATTAAGACAAGCTGTAGAAATGGTCAAGTTAAACCTGACACTTCATGAGACTGCCCAGATGTCAGTACTACTAACAGTGGAGGAAAATGACAGAAAGGGACCTCCGACTAGTGACAGTGAACTGCCAAAGGACAAATTTTCCCAAGCAAATGACCCCCATGTGGACAGCATGTTTGGAGCTAACCTATCTGAAAAGAAAAATGGAGAGGGTCAGGTTTTATTTGAAACAGAAATATCACGAAAGCTCTTTGACACCCTTAATGAAGATCTTTTCCAGAAAATACTTGTACCCATTCAGCAAGTGTTGAAAGAAGGCCACCTGGAAAAGACTGAGATTGATGAGGTGGTCTTGGTTGGGGGCTCAACTCGTATTCCTCGAATCCGCCAAGTCATCCAAGAGTTCTTTGGAAAGGACCCCAACACGTCTGTAGACCCTGACCTGGCCGTGGTGACAGGAGTGGCTATCCAGGCAGGGATTGATGGAGGCTCTTGGCCTCTCCAAGTCAGTGCTTTAGAAATTCCCAATAAGCATTTACAGAAGACCAACTTCAACTGAAGTACGAAAGGATGGCTGTTTGAGATCTTGTCTAATGATCTCTTCCTCTTTATCAGACAACCTCCATCAGCCAAATAAAGTCTCGAAAATGTCTCACACATTTACCTGAAAAATAACGTTTATATATATGAAATTTTGCATAACATTTTAAGATTGAATGTGACCAGATCGATCCTTCTTGATTTTGGAGAGATCCCATTCCAACAAGTACTTCTAAAATGATAGAATTGAGGTACAACTCTCTTACTGGATTATAGGTGACTGTATTTTCTGGATTCTGGAAGTAGACATCCATGTGCACTTAAAACTATATTCTGTAAACATTGCCTAGTGCCAATTATATGATTCCCAGTTCTTACTAAATTGTGTTAGCAGGGGCTGGCAATTTATTTACTTGGTTATCAGATGTAATTCTTAATTTGAACTATACTTGAAGGACAGTGTTGATGTCATGTACTTACATTGACTAGGAGATAGCAGTGTTATTTATATAAGCTGCATATACAATGTTCAGTAACAGCCATATTATATGACAAAGTTAACCTTCACAGAGTCAGTGTCCTGTTATGTGTCCTATTCATGTAACCTGCATTCTCCAGAGTTTTAAAATATATTTATTGAATCAGTTTGTTTTCTTTCTAAAAAGCTACAAATTTATTCAAATATTTCATTACCAATTTATATTTTATTTCTTTAATCTGCTATCATTCTCTGCTTCGATTTCCATGATTCTGCATGGTTAGAAAACAAAAGAGAATTATTAATTACATTTTAAAAATGTGTTAATGTCACAATATTTATTACTATAATTTTTTTGGTTATTTAAGACCTTTGTAGATGTTGATAAGGGGCTTTCCTGGTGGCTCAGTGGTAGAGAATCTGCCTGTCAATGCAAGAGACACAGGTTCAAGCCCTGGGTTGAAAGATACCCTGGAGAAGGAAATGGCAACCCTCTCCAGCATTCTTGCCTGGGAACTCCCATGGAGAGGAGCCTGGGGCTACGGTCAATGGGATTGCAAAGAGTCAGACACACAACTTAGCTATCAAACAACAAGACATTGATAAATAGCAGTAATTAGGTACAGTATTTATTTATTTTATGTTTTTTTTTTTTCAGTGTTTATTGTCAGTAAGCCCTGGAGAATTTAGCTTGCGTTAGATTCAGTTTTACTGACATTTTTCCCCATATTTAGTTGTGAATGAGGAAAATTGTACTCATTTGCAAAATCCTTGTTATTTGTTTCCTACCGTCATTTAAAAATAATCAGACTTGGACTGTTTTAACCGTAAGGTTAGTTTGTGATAAGAACAAAAAATTCATGAATACTGGAAGTAATATGGAAATCTCATGGAAGGCAATGTTAAAAAATGTCCACAAATCAGCATTTATAGTAACATTGGTATAGTGCAGTAGTTTTAGTTTGTTTCCTTTTAGAAAAGCTGCAGGAACCAAGAAAGGAAACATAGTGGTTTTATTTGTTATGCCCCTATTATTTGAAGATTTTCTTTTTCCTTAATAGAGGCTACTTCCTCTCAATATTCAAAAGTTATACTCTGGTCAACATTTTTGCTAATGTAAAATATGTCTCTTTACCCATTGCTGAATTTGAAAGGATGTTGAATTTCCAATCACTGAAAAAAAGAAAAAAGCAAACGCACTTCAGCAACATCAAAACATTTCTGCTTCTCATAGTAAAATCTAAGTGTTTTTGTAGATTATAAAGAAAATATTTCTTAGCAATGAAATTACTGTTAAAACAATTTCAGTCAGATACTTTTGTGAATAGAAAATGTCTGTAGTAGATAAGTAGAAAAATATAAAATGTCTGTTCACATGTTTTATTTTTAGAACTGAATGGAGAAATGCCAAAGAGGAAGACTTCACTGCATTATAAATATATTCAAGTGTTCTTTTGAACTTTATAAAAATTTTTACTAGACTTAAAAATTGAAAAAGATCTTTGTGCAAAGGTCTTTTAAGAGAAAAGTGTTCAATTTATCAAAATCTCTATATATAGTACCAGCTTTAACTAAAGCATTTTAAGATTTTTTTTTTTAAAGTTCGAATTTCTCCGATATATGAGATAGTTCAGGACAGTCTGTTAAGAGTTCTTAGAGGAAACGATTTGCAAGACAGAATGGCTAATCTCATACTCTAAAATTGGAATTTAAAAAATTTGATTGTGTCTGAAAAATAGAATGGCAGTGTTGGAATTTGGAGCCAATAGTTGAGCATATTCTCTAGAATAATACACTTTAAAAAAAATTGTGTCTGTCTTCAATCATATTTAGGAGGCTATGTATAAATAGTCTTGAAGTCAATGTAGTTTATTTAAAAGGTAAAAATGCATTCTGAAAGGGATCATTTATATATAATAATCTGAAGACATTTTCCATAAAACTATATTTTGGTTGGTTGTACATCTTGCTAGTGTTTTTTGAAGTACATAACTTTTAAAATATTAACTGTCTTCTATGATTAGAATATGTGAATGAATGTTTGGTGTCAGGAATGTTTCGGTACCACTGTTCTCACGGGAACCACTGATGTATCGGCAGATACTATTGTGTATGACGTGTTCTGAAGATCATAGTTGCTGTGCGTAACATTGTGCCTCTTAACTTTGTGTGCACACAGGTGGTTTACATTTTAATGTAAATAAATGCCACTTTGCAGTTTGTTTTTTAAACTGTGTCCTTTATTTTCTATTTGAGACTATACCAGAGTACATTATTTGATGTAAATAAGAAAGGAAGTGGGAATAGAGCTGATCTGATGCTTATGGCACATGACCTCAGCAGGTATGGCCTACTTTCCTGCATCCTGAATGTCCCTGAAATTGCTTACTTTTATACTTATTTCTTTATTTTTTAATTAATGTTTATTGGAGTATAGT EMBV3_18698 TGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCGTCTG Gene BVV0102_210955 + 1 EMBV3_20380 GK000026.2:9360346-9410908 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00062753 TCONS_00063037 TCONS_00055302 TCONS_00124927 TCONS_00210177 TCONS_00249921 TCONS_00250503 TCONS_00186108 TCONS_00175865 TCONS_00148465 TCONS_00248863 TCONS_00007532 TCONS_00109859 TCONS_00210508 TCONS_00008225 TCONS_00009883 TCONS_00218891 TCONS_00010052 TCONS_00064811 TCONS_00239219 TCONS_00161793 TCONS_00175545 TCONS_00040583 TCONS_00137302 TCONS_00208127 TCONS_00116666 TCONS_00117484 TCONS_00021596 TCONS_00038933 TCONS_00152628 TCONS_00066192 TCONS_00189806 TCONS_00206861 TCONS_00199595 TCONS_00033746 TCONS_00007555 TCONS_00062743 TCONS_00019962 TCONS_00063180 TCONS_00020399 TCONS_00185807 TCONS_00240878 TCONS_00252056 TCONS_00108589 TCONS_00064867 TCONS_00162783 TCONS_00124845 TCONS_00176254 TCONS_00124584 TCONS_00142124 TCONS_00135701 TCONS_00206539 TCONS_00006827 TCONS_00241788 TCONS_00047865 TCONS_00160965 TCONS_00022065 TCONS_00207514 TCONS_00054939 TCONS_00020016 TCONS_00175818 TCONS_00249012 TCONS_00066259 TCONS_00031911 TCONS_00209098 TCONS_00071185 TCONS_00254831 TCONS_00179470 TCONS_00055388 TCONS_00019263 TCONS_00179054 TCONS_00222115 TCONS_00154085 TCONS_00152726 TCONS_00207359 TCONS_00070810 TCONS_00152738 TCONS_00224114 TCONS_00175199 TCONS_00250938 TCONS_00156870 TCONS_00071110 TCONS_00186411 TCONS_00249570 TCONS_00020010 TCONS_00240475 TCONS_00209529 TCONS_00218178 TCONS_00010588 TCONS_00010779 TCONS_00238445 TCONS_00200933 TCONS_00250197 TCONS_00115687 TCONS_00152859 TCONS_00231502 TCONS_00252012 TCONS_00176249 TCONS_00038457 TCONS_00165813 TCONS_00136848 TCONS_00122321 TCONS_00249283 TCONS_00060369 TCONS_00023615 TCONS_00252354 TCONS_00057311 TCONS_00137224 TCONS_00040835 TCONS_00037625 TCONS_00006222 TCONS_00251930 TCONS_00218899 TCONS_00055867 TCONS_00199603 TCONS_00065249 TCONS_00157488 TCONS_00123618 TCONS_00039853 TCONS_00032143 TCONS_00249989 TCONS_00238357 TCONS_00072815 TCONS_00177280 TCONS_00166139 TCONS_00250580 TCONS_00218553 TCONS_00185582 TCONS_00156997 TCONS_00122096 TCONS_00187057 TCONS_00125001 TCONS_00048558 TCONS_00054574 TCONS_00080765 TCONS_00245928 TCONS_00009591 TCONS_00218851 TCONS_00031495 TCONS_00088087 TCONS_00223462 TCONS_00218943 TCONS_00056728 TCONS_00157440 TCONS_00189890 TCONS_00231487 TCONS_00206887 TCONS_00136896 TCONS_00198816 TCONS_00007442 TCONS_00064461 TCONS_00206419 TCONS_00007719 TCONS_00201733 TCONS_00238326 TCONS_00038667 TCONS_00166733 TCONS_00209835 TCONS_00185876 TCONS_00251706 TCONS_00056147 TCONS_00054954 TCONS_00242007 TCONS_00239418 TCONS_00116101 TCONS_00107447 TCONS_00070840 TCONS_00063487 TCONS_00030941 TCONS_00050046 TCONS_00116696 TCONS_00176255 TCONS_00124110 TCONS_00048821 TCONS_00040698 175 XLOC_155966 XLOC_037480 XLOC_037764 XLOC_033110 XLOC_076470 XLOC_128687 XLOC_152864 XLOC_153446 XLOC_112161 XLOC_105644 XLOC_090345 XLOC_151806 XLOC_003093 XLOC_065763 XLOC_129018 XLOC_003783 XLOC_005436 XLOC_132210 XLOC_005604 XLOC_039535 XLOC_145885 XLOC_098678 XLOC_105326 XLOC_024399 XLOC_083512 XLOC_126640 XLOC_070832 XLOC_071650 XLOC_012269 XLOC_022753 XLOC_092393 XLOC_040909 XLOC_115843 XLOC_125381 XLOC_121248 XLOC_019979 XLOC_003116 XLOC_037470 XLOC_010640 XLOC_037907 XLOC_011076 XLOC_111860 XLOC_147542 XLOC_154997 XLOC_064494 XLOC_039591 XLOC_099664 XLOC_076388 XLOC_106033 XLOC_076128 XLOC_086549 XLOC_081924 XLOC_125061 XLOC_002389 XLOC_148452 XLOC_027997 XLOC_097858 XLOC_012736 XLOC_126029 XLOC_032748 XLOC_010694 XLOC_105597 XLOC_151955 XLOC_040973 XLOC_018156 XLOC_127609 XLOC_042957 XLOC_157763 XLOC_109243 XLOC_033196 XLOC_009943 XLOC_108827 XLOC_135424 XLOC_093846 XLOC_092491 XLOC_125876 XLOC_042587 XLOC_092503 XLOC_137410 XLOC_104982 XLOC_153881 XLOC_095330 XLOC_042883 XLOC_112463 XLOC_152513 XLOC_010688 XLOC_147139 XLOC_128040 XLOC_131641 XLOC_006139 XLOC_006330 XLOC_145112 XLOC_122583 XLOC_153140 XLOC_069856 XLOC_092624 XLOC_140991 XLOC_154953 XLOC_106028 XLOC_022281 XLOC_100653 XLOC_083059 XLOC_073876 XLOC_152226 XLOC_036700 XLOC_014282 XLOC_155295 XLOC_035110 XLOC_083434 XLOC_024649 XLOC_021455 XLOC_001785 XLOC_154871 XLOC_132218 XLOC_033675 XLOC_121256 XLOC_039971 XLOC_095943 XLOC_075170 XLOC_023670 XLOC_018386 XLOC_152932 XLOC_145024 XLOC_044583 XLOC_107054 XLOC_100977 XLOC_153523 XLOC_131873 XLOC_111635 XLOC_095457 XLOC_073652 XLOC_113105 XLOC_076544 XLOC_028690 XLOC_032383 XLOC_049649 XLOC_150855 XLOC_005144 XLOC_132170 XLOC_017743 XLOC_052874 XLOC_136762 XLOC_132262 XLOC_034531 XLOC_095895 XLOC_115927 XLOC_140976 XLOC_125407 XLOC_083107 XLOC_120469 XLOC_003003 XLOC_039185 XLOC_124941 XLOC_003279 XLOC_123378 XLOC_144993 XLOC_022490 XLOC_101569 XLOC_128346 XLOC_111929 XLOC_154647 XLOC_033950 XLOC_032763 XLOC_148671 XLOC_146084 XLOC_070270 XLOC_063357 XLOC_042617 XLOC_038214 XLOC_017192 XLOC_030177 XLOC_070862 XLOC_075662 XLOC_028952 XLOC_024514 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_19308 TAGGCCCCACCCCGTGCCTGACTATGAGCTAAGGAGGCCCATGTTGCTGCCCGTGTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43175 AGCTTGGCTGAGCTCGAGGGCTGGTTTCTGATGACTATGACGGTTTTGTCAAGTTTACTG Gene GeneID:519697|UCK1:NM_001075792:109_cdna Constitutive 0 NULL GeneID:519697 11 GENE UCK1 MGC142691 uridine-cytidine kinase 1 EMBV3_37793 CTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCT Gene BVT0102_207455 - 1 EMBV3_13355 GK000030.2:46621703-47028834 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00129783 TCONS_00066283 TCONS_00231338 TCONS_00249539 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00209830 TCONS_00020157 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00175855 TCONS_00177370 TCONS_00169198 TCONS_00218945 TCONS_00250930 TCONS_00008224 TCONS_00166977 TCONS_00021569 TCONS_00137878 TCONS_00107179 TCONS_00239419 TCONS_00157439 TCONS_00189806 TCONS_00038458 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00062744 TCONS_00048820 TCONS_00109027 TCONS_00155780 TCONS_00000305 TCONS_00124585 TCONS_00251707 TCONS_00130084 TCONS_00039226 TCONS_00178325 TCONS_00161667 TCONS_00167260 TCONS_00010054 TCONS_00040836 TCONS_00065823 TCONS_00140840 TCONS_00209032 TCONS_00156838 TCONS_00110323 TCONS_00130290 TCONS_00063486 TCONS_00207365 TCONS_00057310 TCONS_00020756 TCONS_00249772 TCONS_00010471 TCONS_00224483 TCONS_00021595 TCONS_00157613 TCONS_00088088 TCONS_00199424 TCONS_00155778 TCONS_00059708 TCONS_00161835 TCONS_00080066 TCONS_00198813 TCONS_00177281 TCONS_00170823 TCONS_00116665 TCONS_00249569 TCONS_00223554 TCONS_00070810 TCONS_00107832 TCONS_00222114 TCONS_00199037 TCONS_00110403 TCONS_00019199 TCONS_00122479 TCONS_00122686 TCONS_00157036 TCONS_00152645 TCONS_00180345 TCONS_00218178 TCONS_00249639 TCONS_00210234 TCONS_00252353 TCONS_00224113 TCONS_00197928 TCONS_00152736 TCONS_00116100 TCONS_00250720 TCONS_00242131 TCONS_00169197 TCONS_00010366 TCONS_00124846 TCONS_00038381 TCONS_00152744 TCONS_00222766 TCONS_00242885 TCONS_00023373 TCONS_00252810 TCONS_00207069 TCONS_00175546 TCONS_00209846 TCONS_00065476 TCONS_00209711 TCONS_00013635 TCONS_00252107 TCONS_00009884 TCONS_00148280 TCONS_00040883 TCONS_00056146 TCONS_00249011 TCONS_00176735 TCONS_00123620 TCONS_00248864 TCONS_00224475 TCONS_00031939 TCONS_00131137 TCONS_00039951 TCONS_00169199 TCONS_00155779 TCONS_00063181 TCONS_00009259 TCONS_00234065 TCONS_00111497 TCONS_00224484 TCONS_00209636 TCONS_00020017 TCONS_00007431 TCONS_00222455 TCONS_00245928 TCONS_00233372 TCONS_00218896 TCONS_00153218 TCONS_00240534 TCONS_00085967 TCONS_00063080 TCONS_00207755 TCONS_00199802 TCONS_00197601 TCONS_00250246 TCONS_00238327 TCONS_00040179 TCONS_00040740 TCONS_00064619 TCONS_00200529 TCONS_00135546 TCONS_00115148 TCONS_00250726 TCONS_00122313 TCONS_00020023 TCONS_00251907 TCONS_00218898 TCONS_00218552 TCONS_00166449 TCONS_00031910 TCONS_00251929 155 XLOC_107421 XLOC_069855 XLOC_078496 XLOC_040997 XLOC_140827 XLOC_152482 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_128341 XLOC_010835 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_105634 XLOC_107144 XLOC_103305 XLOC_132264 XLOC_153873 XLOC_003782 XLOC_101813 XLOC_012242 XLOC_084087 XLOC_063090 XLOC_146085 XLOC_095894 XLOC_115843 XLOC_022282 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_037471 XLOC_028951 XLOC_064932 XLOC_094822 XLOC_000084 XLOC_076129 XLOC_154648 XLOC_078795 XLOC_023044 XLOC_108098 XLOC_098554 XLOC_102096 XLOC_005606 XLOC_024650 XLOC_040542 XLOC_085269 XLOC_127543 XLOC_095298 XLOC_066227 XLOC_079001 XLOC_038213 XLOC_125882 XLOC_035109 XLOC_011431 XLOC_152715 XLOC_006022 XLOC_137538 XLOC_012268 XLOC_096068 XLOC_052875 XLOC_121077 XLOC_036490 XLOC_098720 XLOC_048950 XLOC_120466 XLOC_107055 XLOC_103665 XLOC_070831 XLOC_152512 XLOC_136854 XLOC_042587 XLOC_063742 XLOC_135423 XLOC_120690 XLOC_066307 XLOC_009879 XLOC_074034 XLOC_074241 XLOC_095496 XLOC_092410 XLOC_110113 XLOC_131641 XLOC_152582 XLOC_128744 XLOC_155294 XLOC_137409 XLOC_119588 XLOC_092501 XLOC_070269 XLOC_153663 XLOC_148795 XLOC_005917 XLOC_076389 XLOC_022206 XLOC_092509 XLOC_136073 XLOC_149548 XLOC_014040 XLOC_155751 XLOC_125588 XLOC_105327 XLOC_128357 XLOC_040195 XLOC_128222 XLOC_008165 XLOC_155048 XLOC_005437 XLOC_090162 XLOC_024697 XLOC_033949 XLOC_151954 XLOC_106509 XLOC_075172 XLOC_151807 XLOC_018184 XLOC_079842 XLOC_023768 XLOC_037908 XLOC_004815 XLOC_143544 XLOC_067397 XLOC_128147 XLOC_010695 XLOC_002992 XLOC_135764 XLOC_150855 XLOC_142854 XLOC_132215 XLOC_092983 XLOC_147198 XLOC_052005 XLOC_037807 XLOC_126270 XLOC_121454 XLOC_119262 XLOC_153189 XLOC_144994 XLOC_023996 XLOC_024554 XLOC_039343 XLOC_122181 XLOC_081769 XLOC_069449 XLOC_153669 XLOC_073868 XLOC_010701 XLOC_154848 XLOC_132217 XLOC_131872 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_01549 CATGGTCACTGCCAACAGTGGGTTCATATCCATGGGCACTTTCTTCTTGCTGATCATCTC Gene GeneID:781843|LOC781843:XM_002690765:527_cdna Constitutive 0 NULL GeneID:781843 10 GENE LOC781843 NULL similar to olfactory receptor 1276 EMBV3_03449 GGGAACCTAGATTTTGAACGATCCCAGCATGGTTCTGGAATGAGCAACAGGTCAGCAGCA Gene GeneID:507507|MCM8:XM_002692367:245_cdna Constitutive 0 NULL GeneID:507507 13 GENE MCM8 NULL minichromosome maintenance complex component 8 EMBV3_39949 GTGCATCAGTTCAGGTTTCAAATGAAGCTGCTGTTACAACCAGCCTTTGCTAGTGTACAC Gene BVT0102_075034 + 0 NULL GK000030.2:144006854-144231670 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248677 TCONS_00248678 TCONS_00248676 TCONS_00248670 TCONS_00248675 TCONS_00248671 TCONS_00248674 TCONS_00248672 TCONS_00248673 1 XLOC_151664 Coding TCONS_00248671 XLOC_151664 Coding Coding EIF2S3Y X:144158704-144188539 j TSS185923 814 1 TCONS_00248671_1 142 4 0.972849768720252 2.37602926288424e-99 0 3.30051875370048e-23 1.81346405871841e-88 0 0 3.42711449270901e-100 4.32550288583204e-06 1.17467235407057e-06 0.000295582057997899 1.03799401758915e-10 0.000123082522538928 0 2.61988510884991e-08 1.89068385015021e-05 0.00537375810389304 0.00326709878444224 0.00853363784610984 2.76465402964707e-29 5.29264191565424e-117 3.42137148304471e-41 0.00305404455586623 6.00551704530581e-12 0.00298648784201302 2.09519711664095e-14 1.61996354388609e-189 3.64451866183807e-18 0.000547153329095791 0.00087156306259475 0.00136920188634926 XM_003584369.2 EIF2S3Y PREDICTED: Bos taurus eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked (EIF2S3Y), mRNA. 0.0 1359 100.00 0.923832923832924 NM_001415.3 EIF2S3 Homo sapiens eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa (EIF2S3), mRNA. 0.0 670 86.74 0.664619164619165 TCONS_00248671_1 sp|Q9Z0N1|IF2G_MOUSE IF2G_MOUSE Eukaryotic translation initiation factor 2 subunit 3, X-linked; 1e-88 270 99.25 0.936619718309859 1 coding 0 0 0 0 -0.164389536803943 0.181162511983857 0.0205203021214848 0.73438100414735 ATGAACAGAGGATACTAGTGGCTGTGTACAGTCCATGGAGTCAGAATCAGACACAAGAGTTGGAACAAAAATTGACCCCACTTTGTGCCGGGCTGACAGAATGGTGGGGCAGGTGCTTGGTGCAGTTGGAGCTTTACCAGAGATTTTCACAGAATTGGAAATTTCCTATTTTCTACTTAGACGACTTCTTGGTGTACGCACAGAAGGAGACAAGAAAGCAGCAAAGGTACAAAAGTTGTCCAAGAATGAAGTGCTCATGGTGAACATAGGATCCCTTTCAACAGGAGGAAGAGTTAGTGCCGTCAAAGCTGATTTGGGTAAAATAGTTCTCACTAATCCTGTGTGCACAGAAGTGGGAGAAAAAATAGCCCTTAGCCGAAGAGTTGAGAAACATTGGCGTTTAATTGGTTGGGGTCAGATAAGAAGAGGAGTAACCATCAAGCCAACAGTAGATGATGAATGAAGATTATCAGTTAAATAATACATTTGGATGAAGTCAGAATTTCTCTTAAAAAGCTAGTGGTATAATTTCAAAGCAGTACCAGCAAATACATTTCATTTCCTTAGTAGAGCTGTTAAGGTTGTTTTCATTTTTTTTCTGATGAGAATTAGTTTTTATTCTAAAACAAATAATAGGGTTTATGATAAATGTCAGAATTAGCATGTTGATGGGTTCAACCCACATTTTAGCAATGTCACTTTTGTGCATCAGTTCAGGTTTCAAATGAAGCTGCTGTTACAACCAGCCTTTGCTAGTGTACACATACCACTGAACCTGTTTGAAATAAAGTTTTTCTCTTAGTTTTTCATGATT EMBV3_32383 GCACATCAATGAGCACTCCTTCAACAATTTCCAGATGAAGATCGGACTGAACATGGGCCC Gene GeneID:509936|ADCY6:NM_001143877:56_cdna UTR3_Alt 2 NULL GeneID:509936 5 GENE ADCY6 NULL adenylate cyclase 6 EMBV3_38226 TGAGTTTGGGAATTCTGGTAAGCCTCCCCCAAAACACTCCCGGAAAAGCTCCAGTGGTAA Gene BVT0102_091034 + 0 NULL GK000029.2:7473317-7553075 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162994 TCONS_00162995 1 XLOC_099787 Coding TCONS_00162995 XLOC_099787 Coding Coding CTSC 29:7433481-7475788 = TSS122270 4405 1 TCONS_00162995_4 463 0.16844494892168 7 0.896043114451851 4.84950161791355e-06 4.3801332377641e-05 1.15170419725734e-07 1.64185990550814e-05 1.88872809975483e-06 7.30809447552446e-08 2.21013969711217e-52 8.53164776951771e-08 1.19486827810021e-07 0.000386081931427557 0.000402089559168924 0.000123722152372053 3.39233492942241e-06 0.000107733215270594 5.65016922102586e-06 0.000705110738427952 3.16495584341962e-07 1.54262502073559e-06 4.5940867311639e-05 3.84360756729237e-07 2.03577520826341e-235 8.64077561781758e-06 0.000229638593944836 7.4201182342462e-07 1.17484787454209e-07 4.22227029288403e-05 1.85704460989536e-07 0.000369722334997501 1.31347255665088e-07 8.98133402552338e-05 NM_001033617.2 CTSC Bos taurus cathepsin C (CTSC), mRNA. 0.0 3481 99.95 0.438592508513053 NM_001814.4 CTSC Homo sapiens cathepsin C (CTSC), transcript variant 1, mRNA. 0.0 1802 82.73 0.406129398410897 TCONS_00162995_4 sp|Q3ZCJ8|CATC_BOVIN CATC_BOVIN Dipeptidyl peptidase 1; 0.0 968 99.78 0.997840172786177 2 coding 0 1 1 1 0.0924000737899934 0.497146564318031 -0.0512581242970745 0.564337663596649 AGTCTCGCCCGGCTCGCCGCGGCTTTCTGTCGCCCCCGCTTCCTCCCGGCTCTGCCGGCATGGGTCCCTGGTCCGGCTCGCGGCTCGTCGCTCTCTTGCTGCTCGTCTATGGCGCTGGCTCCGTGCGCGGGGACACGCCTGCCAACTGCACCTACCCCGACCTGCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGGCTCCCAGCGCGATGTCAACTGCTCGGTGATGGGACCCCCAGAAAAAAAAGTGGTGGTGCACCTCAAGAAGTTGGATACAGCATATGATGACTTTGGCAATTCCGGCCATTTCACCATCATTTACAATCAAGGCTTTGAGATTGTGTTGAATGACTACAAGTGGTTCGCCTTTTTTAAGTATAAAGAAGAGGGTGGCAAGGTAACCAGTTACTGCCACGAGACCATGACTGGCTGGGTCCATGACGTGCTGGGCCGGAACTGGGCCTGTTTCACTGGAAGGAAGACAGGAAATACCTCGGAGAACGTGAACGTGAACACAGCACGCCTTGCGGGTCTCGAGGAAACGTATTCTAATAGGCTCTACAGATATAACCATGACTTTGTGAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGCAGCCCCATACATGGAATATGAGACTCTTACCCTAAAAGAGATGATTAGGAGAGGTGGTGGCCATAGCCGGAGAATTCCAAGGCCCAAACCTGCACCAATCACTGCTGAAATACAGAAAAAGATTTTGCATTTGCCAACATCCTGGGATTGGAGAAACGTTCATGGTATCAATTTTGTTACTCCTGTTCGAAACCAAGGGTCTTGTGGAAGCTGCTACTCATTTGCTTCTATGGGGATGATGGAAGCAAGAATCCGCATACTAACCAACAACACTCAGACCCCGATCTTGAGTCCTCAGGAGGTTGTGTCTTGCAGTCAGTATGCTCAAGGCTGTGAAGGTGGCTTCCCTTACCTCATCGCAGGGAAGTATGCCCAGGACTTTGGGTTGGTGGAAGAGGACTGTTTCCCCTACACAGGCACGGATTCGCCGTGCAGACTGAAAGAGGGCTGCTTCCGGTACTATTCCTCCGAGTACCACTACGTGGGCGGTTTCTACGGGGGCTGCAATGAAGCCCTGATGAAGCTTGAGCTGGTCCATCAGGGGCCCATGGCCGTCGCCTTTGAAGTCTACGACGACTTCCTCCACTACCGCAAGGGCGTCTACCACCACACGGGGCTGCGAGACCCTTTCAACCCCTTCGAGCTGACCAATCATGCTGTGCTGCTGGTGGGCTATGGCACTGACGCGGCCTCTGGACTGGATTACTGGATTGTTAAAAACAGCTGGGGCACCAGCTGGGGTGAGAACGGTTACTTCCGCATCCGCAGAGGAACCGACGAGTGTGCGATCGAAAGCATAGCGCTGGCGGCCACCCCGATTCCTAAGTTGTAGGGTGTACCTCGCAGGGTTTCACGCTGACCACCGCCAGCCAGGAAGGGAAGATGCCTTATTCAGGGACTGGAGACATGTACGGTATTGCTACTGCAGTTTCAAAAGATTATAGATAGCTTCCTGTGAAGATCTGTGCCTTTACAATTAAAAGTGCCCTTGATTTTAATTTTAATACACTTTCCCCCTGAAAAGCAGTCTGCTTTTTCCTCAGTACTCTGTTCAGTGCGGTTTTTATGGAGGATGGTGAGAGACGAAGTAATGGATTTTGCTAATCATTTTGTGATTCAAACGCATGCTGTATTTTAAAAACAATCGACAGAACCACACAGGCTTATTTTTAAATTGTATAAATCATGAGACAATGTGACAATGGTTATTAAAAAAATTTTATAAATATTCAAGTGATATAAAAAAAGAAAAAATATTCAAGTGATATGTACTATGGAATTTATGTATGTGCTTAAGAGAATTTTTACTCTTGACTCCTTCTGTTATATTTATTTATTTCACATATGTAAATACTTGAAAAAGAAAACTCATTTCAGGGCATCTCCACTAAAAACAAAATTATGAATCTTTATAATAGGGGGTATATGCAATTGAAATCTAGTGAACTGTTCTCCTGTGGCTCAGTGGTAAAAAATCTACATGCAATGCTGGAGACTTAGGAGATGCTATTTCTATGCCTAGATCAGGAAGATTCCCCTGGAGGAGGAGATGGCAACTCATTCCAGTATCACTGCCTGAAGAATCCCATGGACAGAGGAGCTTGGCGGGCTACAGTCCATGGGGTTGCAAAGAGTCAGACACAACTTAGTGAATGAGCATGCATGCATGAACCCTGAAAAGTTATCTCCTGGGTATTTGAGGAGCCAGGGATTATAGAGAAAAGAAACTCCAGTTTTGATGAGTCTGGATATTGGTTAAAACGTTTTACAGTGTATCTTGCCCTTGAAGGTATTGGTTAGCCTTCACTGGCTGAGCAGTAATAGCCCAATAAGTGGAATATTAGCAGTTTAGATTTGGTCAGGTCTTTGGGATCTCTGGGCTTCCCTGGTGGCTCAGACGGTAAAGCGTCTGCCCACAATGCGGGAGACCCGGGTTCGATCCCTGGGTCGTGAAGATCCTCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAAAATCTCATGGATGGAGCCTGGTAGGCTACAGTCCATGGACTTGCAAAGAGTCGGACACGACTGAGCGACTTGGGATCTCCAAGGGATATTTCAGAGATGTGAAACCTCCACACTGAGTAAACAGATAGGATCCTGTAGAAATGATAGATCAGGCAAAATTAGGCAAATTAGTCAAAGCTCTAAACCATAAATAAGAACCATAAGGCTTCTAGAACTGACAGGAACCCTAGTGATCATAGAGATCATGCCGTCTTACTTTCTCTTAATCAGAAAAAGAAACTAAGGCTCACTCAGTGGGCACGTGACTCATCCAAGGTCAAATGATGAGTCTTGATTAGAACCTAGATTCTCTAAGTCTGGCTCTCCTTGAGTGCCTTAGACACTGAATCTCTGCACTTTCCACCAGAGGGTCCAAAATCACCGAGGATACCAGGTGCATACTTGGAAATTTCACATTGACATGTGAAGTCTCAGAGCTTTGTCTTAAACCCCATGTCCTTCTTGCATTGCAACTCACTACAATGACATTTTTGCTGTTAAACTGAGGCATATTCCAGGAGTTTGCCTTGTTTTTAAAGGGTGGCCCCTGGCACATGGCCACATACTTTTGACCTTTTTACCACAGGATGACAAAGAGGCAGACACTCTGAGTAGCAGGTGTAACCAGAGTCCTCATTACCTGGAAGACCTCCAAGGAGGTATATTTTCTTTGTTACTGTTACTTGTTGAATATAGTTTATGCTTAGCCTTGTTGCTATATGAATGTGTAAATAAACTTTGCAATGAGGCAGGAATTCATTTTTCACTAAAATTTATAAAGATACATCAGCTTAATACCTAAGATTTTCTTTAACCTGTAAACATGAGCCCATCCTTTGGTTTTTATTTGGACATCAGTCAGCTGACCCACGGGAGAGCATGTCCAAACTTTTCCATAATCTCATGAGGGCCCTGGCTGAGCTCTGAAGGAAAATTGTTGGCCCGTATCATTCATTAAATACTTGAGGAAATATTAAAGGACTAAATACAGCCATGGTCTGGTCTCACAAGCATGATTAGTTGAGGACAAACAATGGTTTGAAGAGGCCCCAAGTTTTCAGAGATTGCAAGCAGAATCACCCAGAAGCTCCAATTACACTGCCCTCCAACTTGCATTTTTCTGCTGTGAGACGTCTGCTTTTCCTGTGACTCTACAAGAGAAAGATCACCATTTCATGTGCAGTGGTGGAATTAATTCAAGATGTTGACTGAATTAATTCAAGATGTTGACTGAATGGAACATCATGGTTCCTCAAGCCACGTCATTAAACTGTTAAACTACAAAAGTAGCTAGTTGCATTATCTAAAAATTTTTTATATCAGAAAAGAACATAATCATCAAAAGAACATATCATCAGAACATATCATCAAAGTCTGTTGAGAAAGTGAGCTCTAAGGGAAAAAAAAAAAAAAATGAGTTTGGGAATTCTGGTAAGCCTCCCCCAAAACACTCCCGGAAAAGCTCCAGTGGTAATGTGCATTGATGATACCACTGGCCACAAAGAAAACAATAGCTTTAGCTGGGCAGTCCAGCACAGACGATCCTGACCCTGGTGCTTTAGTGCCTAGGAGGGATTGCTGGCTCTGCCACACGAGCTCTGAAACCTAGGGCAGCTTACTCAGCCTGCCTGTGCGTCTGTTTGCTCATCTGTAAAACGGGGATAATGGGGTAAATATCTATCCCTGTGTGAACGCTTCCTAAACCCTTGCTGTTACAATAAAGGAACCAAATGGGTTTGCACT EMBV3_20444 ACGGTGGGATCTCTGGCCCCTCAGGGACTTAGGCTTATCTATAAATGCTGGTCTGAAAGT Gene GeneID:613382|HDDC3:XM_002696581:10_cdna Constitutive 0 NULL GeneID:613382 21 GENE HDDC3 NULL HD domain containing 3 EMBV3_09486 GGCTCATGGTCCTCAAGATCTCATTACCAGTCATTGGGCTCGACGAAATCCTCAAGTTCG Gene GeneID:518117|ATP2A1:NM_001075767:344_cdna Constitutive 0 NULL GeneID:518117 25 GENE ATP2A1 MGC140007 SERCA1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 EMBV3_13899 TGAGGATCAGGAAGCTGAGCAGCAGGTTGAGGAGGAGCTGCAGAAGGTGGAGGTGCAGAT Gene GeneID:100138159|SFI1:XM_002694631:103_cdna Constitutive 0 NULL GeneID:100138159 17 GENE SFI1 NULL Sfi1 homolog, spindle assembly associated (yeast) EMBV3_09692 CCATGGGGTCAAAAGGTACCTAAGTATATGATTGCAAGTGGAAAATAGGGGACAGAAATC Gene GeneID:781224|LOC781224:XM_002688399:61_cdna Constitutive 0 NULL GeneID:781224 6 GENE LOC781224 NULL similar to Histone H3.3B CG8989-PA EMBV3_13769 CGAGAGTGTGACGAAGTCTTCATAACTAACTGCCTCAACCAAGAGCACCGTTTAGCTGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11280 GACGGTCATTGCTGTGGTGTTACTGGTGTTTGGAGTTGCAGCGTATCTGAAGATCAGGCA Gene GeneID:518368|PARM1:NM_001075771:71_cdna Constitutive 0 NULL GeneID:518368 6 GENE PARM1 DKFZP564O0823 MGC152175 prostate androgen-regulated mucin-like protein 1 EMBV3_18123 ATTGAACAAGCAACCGTCCATTCTAGCATGAGAAATGCCATTGAGCGTTTTTGTGGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24437 CCTGGGTTATCGGTGAGTTTTTATAGTTTGTAAAGGGAGAATTGTGACCGAGCAGCTGGC Gene GeneID:281060|CD8A:NM_174015:2_cdna Constitutive 1 NULL GeneID:281060 11 GENE CD8A NULL CD8a molecule EMBV3_07401 ACACTTCCCCAGACAGGACCCGTTGCCCTCATTCCCAAAGAACTGCACACCGGAATTAAA Gene GeneID:508018|FREM1:XM_002689580:24_cdna Constitutive 0 NULL GeneID:508018 8 GENE FREM1 NULL FRAS1 related extracellular matrix 1 EMBV3_13843 TCTCCCTAGGCCCAGGGGCCTCTCCCAAGAGCCCCAGGCCCGGGTGTGGACTTCATTACC Variant GeneID:524652|C18H16orf48:NM_001035350:297_cdna 397^695 4 EMBV3_35489 GeneID:524652 18 GENE C18H16orf48 C16orf48 MGC127802 chromosome 16 open reading frame 48 ortholog EMBV3_43176 ATGCTTCTCCATCATATCACTAACAGGAAGACCAAGGAGGATACAGGTGCAGAGGGGTGG Gene BVV0102_390582 + 0 NULL GK000012.2:33370251-33409893 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38179 CTTCCACAGCCATTCTGCTGTTTCTCGCTTCGCCCTCTTCATTCCATGATCGAGTGTGCT Gene BVV0102_014936 + 0 NULL GK000002.2:133639704-133660212 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41417 ACTCCGCCGGCCAAGATATCAACCTGAATTCTCCTGCTGTCGAGGGTCTGACGGAGACCG Variant GeneID:534704|TPD52L2:NM_001034615:1213_cdna 170^238 1 EMBV3_34112 GeneID:534704 13 GENE TPD52L2 MGC127604 tumor protein D52-like 2 EMBV3_13429 GCTTAGCGAGCTCAGGAGAGACCTCAGACAATCTCAAACAAGAGGCTTCCCAGGACTTGT Gene GeneID:100296926|LOC100296926:XM_002692333:122_cdna Constitutive 0 NULL GeneID:100296926 13 GENE LOC100296926 NULL similar to tissue factor pathway inhibitor EMBV3_18384 CCTTGGTATCAAATCACTTTCTGCCTGGTGATGGGACTCCTTTTGGCAGTGGATACAGGC Gene GeneID:782652|FCGR2C:NM_001109806:356_cdna Constitutive 0 NULL GeneID:782652 3 GENE FCGR2C NULL Fc fragment of IgG, low affinity IIc, receptor for (CD32) EMBV3_38077 CGAAACGACTCAACGTTTGTTGACAGCATTACAAACTTAATATGGTATTCATGGTTTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20527 TTCTAGAGAAGTTTTGTTTAGAGCTCTCTGGACCCTTACCCGCCTCCTTCAGGCTCTGGA Gene BVV0102_274477 + 0 NULL GK000013.2:54348721-54353924 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18220 TGTCACAGAATAATTTCGCCCTGGGTTACAAGGCCGCAGACTTCCAGCTGCACACTCATG Gene GeneID:282716|VDAC1P5:NM_174729:35_cdna Constitutive 0 NULL GeneID:282716 27 GENE VDAC1P5 VDAC3 VDAC5P voltage-dependent anion channel 1 pseudogene 5 EMBV3_27015 CCAAAGGACACCCATCTTCCCTTATTTAGCTTTGTTCTCCTTGAGAGGACTAATGTGCTC Gene GeneID:534380|FAR2:NM_001076022:5_cdna Constitutive 2 NULL GeneID:534380 5 GENE FAR2 MGC139657 MLSTD1 fatty acyl CoA reductase 2 EMBV3_03492 AGGTCCGCTACGTAAATCGCTTCGCTGCGGGTTTCTGTAGCTGGATCCAGCACCGGAAGA Variant GeneID:540605|CREM:NM_001034710:148_cdna 98^321 2 EMBV3_11600 GeneID:540605 13 GENE CREM MGC127769 MGC140070 cAMP responsive element modulator EMBV3_20627 CCCAGCTCAGAAACAAGAGGAAACTGGGGCCGCGAAGAAATCACAGCCAAGGAAGATTTG Gene GeneID:525143|SMG1:XM_002698038:259_cdna Constitutive 0 NULL GeneID:525143 25 GENE SMG1 NULL SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) EMBV3_05863 GCCTGCTGCATTGTGGGTGCAGAGTCTTAACCACTGAGCCACCAGCGAAGTCCCCTAAAA Gene BVV0102_424050 + 0 NULL GK000020.2:189929-324336 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05426 CCCACCCTCGAATCAACCTACCGACACCAAGCAACCATTGATGATGAAGTTGTCACCATG Gene GeneID:540025|RERG:NM_001076198:53_cdna UTR3_Alt 2 NULL GeneID:540025 5 GENE RERG MGC142471 RAS-like, estrogen-regulated, growth inhibitor EMBV3_37400 GGGGAAGTCCCTGGATCTCTCCAGCCTCTGCTTCCTTATCTGTAAAGTGGGTATATTGAT Gene GeneID:286817|SLC4A1:NM_181036:197_cdna Constitutive 0 NULL GeneID:286817 19 GENE SLC4A1 BB3 solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group) EMBV3_37257 CCCAGGGACAGCATATCAGAGCTTTGAACAGGACACTTTTGTGGAACTCTACGGGAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27454 AGAGTGTGACAAGAGCTTCGGTCGGAGTTCACACCTTCAAGCCCACCAAAAAGTCCACAC Gene GeneID:789917|ZNF234:XM_002695084:513_cdna Constitutive 0 NULL GeneID:789917 18 GENE ZNF234 NULL zinc finger protein 234 EMBV3_12465 CATGTGTAATGCGAACTGTAAAGAAGCCAGGACCCAACCTGGGCCGCCACTTCTACATGT Gene GeneID:511790|APEX2:NM_001015577:20_cdna Constitutive 0 NULL GeneID:511790 X GENE APEX2 NULL APEX nuclease (apurinic/apyrimidinic endonuclease) 2 EMBV3_38580 TTGATAAACTCCCAAAGTCAAGGGAGAAGGGCGGAGACCTTGTTTACATCCAAGTTGCCC Gene BVT0102_094707 + 1 EMBV3_39810 GK000026.2:31871587-31924431 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36471 GTGTGTGAGTTGTTACTGTTGAACATACTTTACTCCGAAATATTGTGCCATGTGGGTGAG Gene GeneID:540248|SMAD4:NM_001076209:167_cdna UTR3_Alt 2 NULL GeneID:540248 24 GENE SMAD4 NULL SMAD family member 4 EMBV3_39168 AATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTCTGATGACCTCATGTGTCTGTGG Gene GeneID:533890|PDS5B:XM_002691755:285_cdna Constitutive 0 NULL GeneID:533890 12 GENE PDS5B NULL PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) EMBV3_33313 TCCAAGCTCAGACAGAGGCCTGAATCCCAGCCCTTTTCCCCGGAAGAAATCTCGCAAATT Gene BVT0102_167811 + 1 EMBV3_13684 GK000014.2:18333426-18386656 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052887 TCONS_00052889 TCONS_00052888 1 XLOC_031601 Coding TCONS_00052889 XLOC_031601 Coding Coding ZHX2 14:18368118-18466300 j TSS39153 4531 1 TCONS_00052889_4 838 4 0.953891282427354 0.00109120204750034 0.000895838596508311 0.000503474283493462 0.00126652438825015 0.000596322157942047 0.000206708788745095 0.000554637531908207 0.000115741783540118 0.000712959818854931 5.99248781896835e-05 2.53962510855899e-08 1.05106911406969e-10 1.11961807591683e-07 0.000136724745616463 0.000217166850647415 1.68325338521613e-53 0 0 0.000657391518140412 0.000997993493411714 0.000932190538496663 0 0 6.46032573017223e-10 0.000834572998148233 0.00078897662571962 0.000612115407379003 0 0 0.000106369504125788 XM_005215362.1 ZHX2 PREDICTED: Bos taurus zinc fingers and homeoboxes 2 (ZHX2), 0.0 7337 100.00 0.897594350033105 NM_014943.3 ZHX2 Homo sapiens zinc fingers and homeoboxes 2 (ZHX2), mRNA. 0.0 4379 84.07 0.89781505186493 TCONS_00052889_4 sp|Q9Y6X8|ZHX2_HUMAN ZHX2_HUMAN Zinc fingers and homeoboxes protein 2; 0.0 1576 91.17 0.998806682577566 3 coding 0 1 1 1 0.0017610368228998 0.988570208243711 0.0047801138729649 0.922325991723846 GTGTGCGCTGCAGGTGGGCCTCGGCCGGCTGCAGAAACCTCTAGAGCTCAGGCCTCGACTTGCCACGCTGGGAATGAACGCTTCTTCGCTCTCCTGAGGAATTTTCAGAGCACACAGGGCTCAGCCCAGCAGGAGTCTCCCAGGGCGGAAATCCACATGGAGGGCTTTTGTTTCCAGGACTGCCGTATCTTTTGGACTTGAGGCCTGTCGGCAAAGCTTTCCTTCTCCACCCTCACCAACTGTGAACCTCTGTTGCTGCCAAGGAACCGACACCAGGGACTGAAGGCAACTTGGAGTGGGGGTTCAGGAGACGCGTCCCCAGCCCCACCCAGCACATCTTGCTTTTAGTTTCACTCTCCTAAAAGGCCTGCTTCTCAGAAAGCTGCTGACTCACCCAAGAGTGTGAGGGTCTTTTTTTTTTTTTCTTTTTCTCAGCATCACCACAAAGCCCCAAGATTCTTGAGGTCTTGACGCCCTGACTGCTCTGGAGTCGAAGTAAAAAGATTCCCAGGATGTAAGCAACACGGGAACTGGTATGATGCTGCCTCTTGCGTTCTGCCGTTGGAACAGTTAGTTTTCTGTGCTGAAATCATTTTGGGAAACTCAAGCACTAGACTTCAGCGTTCAAGGGAAGCCAAAGCCATTGGAGGGGGCAATAAAGCCAAAAACTTTTTATCTGAGTAGTTCCAAAAATTTCACTGCCCCTTCCCCACCCACCCCCATCCCCCAAATAAGCCATTGCACACAGACAGGCAGCATGGCAAGCAAACGAAAATCCACCACCCCGTGCATGGTTCGGACATCACAAGTGGTAGAACAAGATGTGCCCGAGGAAGCAGACAGGGCCAAAGAGAAAGGAATTGGCGTGCCACAGCCTGAAACGGCCAAGGATACTTGGGCAGCGGAACCTGAAAACTCTTCCAAAGAAAATGAAGTGATAGAGGTGAAATCTACAGGGGAAAACCAATCCAAAAAGCTCCAAGGTGGTTACGAATGCAAATACTGCCCCTACTCCACGCAGAACCTGAACGAGTTCACGGAGCACGTTGACATGCAACACCCCAATGTGATCCTCAACCCCCTCTACGTGTGTGCCGAATGTAACTTCACAACCAAAAAGTACGACTCCTTGTCTGACCACAACTCCAAGTTCCATCCCGGGGAGACCAACTTCAAGCTGAAGCTCATCAAGCGCAATAATCAGACAGTCTTGGAGCAGTCCATCGACGCCACCAACCACATCGTGTCCATCACCACCAGCGGCCCCGGAAGCGGGGATGGTGACGCCGGGATCTCAGTGAGTAAAACCCCCATCATGAAGCCAGGGAAACCAAAAGCCGATGCCAAGAAGGTGCCCAAGAAGCCGGAGGAGGCCACCCCCGAGAACCATGTGGAAGGGACCGCCCGCCTGGTGACAGATGCCGCTGAGATCCTCTCGAGACTCGGGGGCGTGGAGCTCCTTCAGGACTCGCTAGGACACGTCATGCCTTCTGTCCAGCTCCCACCAAATATCAACCTTGTCCCCAAGGTCCCCGTCCCGCTGAACACTACCAAATACAACTCTGCCCTGGATACCAACGCCACCATGATCAACTCCTTCAACAAGTTCCCCTACCCAACCCAAGCAGAGCTGTCCTGGCTGACGGCGGCTTCCAAACACCCGGAAGAGCACATCAGAATCTGGTTTGCCACCCAGCGCTTAAAGCACGGCATCAGCTGGTCCCCGGAGGAGGTGGAGGAGGCCCGGAAGAAGATGTTCAACGGCACCATCCAGTCCGTCCCCCCGACGATCACCGTGCTGCCTGCCCAGTTGGCCCCCACGAAGATGTCACAGCCCATCCTCCAGACGGCTCTCCCATGCCAGATCCTCGGCCAGACCAGCCTGGTGCTGACTCAGGTGACCAGCGGGCCAGCGACCGTCTCCTGCTCCCCCATCACACTTGCTGTGGCTGGAGTGACCAACCATGGCCAGAAGAGACCTCTAGTAACTCCCCAGGCTGCCCCCGAGCCCAAGCGCCCCCACGTCGCTCAAGTGCCAGAGCCCCCACCCAAGGTGGCCAACCCCTCGCTGACCCCAGCCAGCGACCGCAAAAAGACCAAGGAACAGATAGCGCACCTAAAGGCAAGCTTCCTGCAGAGCCAGTTCCCCGACGACGCTGAGGTCTACCGGCTCATCGAGGTGACCGGCCTCGCCAGGAGCGAGATCAAGAAGTGGTTCAGTGACCACCGGTACCGGTGTCAACGGGGCATCGTCCACATCACCAGCGAATCCCTCGCCAAAGACCAGCTGGCTCTCGCTGCCTCCCGCCACGGCCGCACATACCACGCATACCCAGACTTCGCCCCACAGAAGTTCAAAGAGAAAACCCAAGGTCAGGTGAAGATCCTGGAAGACAGCTTTCTGAAAAGCTCTTTCCCAACCCAAGCAGAACTGGACAGGCTGCGGGTGGAGACGAAGCTGAGCCGGAGAGAGATCGACTCCTGGTTCTCAGAGAGGCGCAAGCTTCGGGACAGCATGGAGCAGGCCGTCCTGGATTCCATGGGGTCCGGCAAGAAAGGGCCAGACGCGGCGGCCCCCAACGGTGCTCTGTCCAGACTTGACCAGCTCTCCAGTGCCCAGCTGGCCAGCTCTCTGCCCAGCCCCTCACCAGCGATTACAAAAAGTCAAGAACAGGTTCATCTCCTGAGAAGCACGTTTGCCCGAACCCAGTGGCCGACCCCGCAGGAGTATGACCAGCTGGCGGCCAAGACCGGCCTGGTGCGAACTGAAATCGTGCGCTGGTTCAAGGAGAACAGATGCTTGCTCAAAACTGGAACCTTGAAGTGGCTAGAGCAGTACCAGCCACAGCACGTGGTGGACGATCACGGCTATGACACCCCGTCGAGGAAAGTGGTCAAGACCGTCATCACCGAGAACCCGAAGAATGGGAGTGAGGGGGGTCATCAGTACTACAAGGACCCCAAAAAGCTCTGTGACGAGGACCTGGAGAAGCCGGGACCCAGAGGGAAGGCAGGTGGCGAGCAGGTGAAAGACAATTTGCCGGCAAAGCCCTCGGAGGCCACGTCGGACAGGTCGGAGGGCAACAGCCGGGACGGCCAGGCCAGCGACGAGAACGAGGAGTCGGGTGTCGTGGATTGGGTGGAGGTGACGGTTGGAGAGGAGGACGCTGCCTCCGACAGGTCAGACAGCTGGAGTCAGACGGCAGCGGAAGGCGCAGGGGAGCTGGCTGACTCGGACTCGGACAGCGGCCCGGCGGAGGCCAGCCAGGCCTAGACAGGGAAGTCCATCAGAACTGCCGTGCTGATGCAGGGAATAATCTGTCTTCAAAGAAAGAAGAGAACTTCTCTCCCCGGCTGAGGGCCGCCCTGGCCTGAGACTCCAAGTGGAACGACTTCGCTGCGTGTGCCTGCCGCTGCCTCTGCGCACACGCACCTCCCCGAGGCCCGGTGGGAACTGCTCCTAGTGCCAAAGTCCTACTACTGCGTTTTCCACGGGTCCCTGTAAATAGCTGGCTCCTGCGCCCAGGCCCCCACCTCTTGCTATACTGGAACCAATTTGTACAACATGGGAATTTTGTTACCTTTTTAACCGAGGGCAACTTCCTTTTCCAGCTCTACCATTGTAAGGTCTTTTTTCCAGGAGGGAGGGCTGATCACATGTGCTTTTCTTTTTTTTTCCTTTTTTATTTTTATTAATTTGGGGGAGGGGGGGTGTTAGCATTAGTGCCATTATATCTACTGGATTTTAGGTAGGGCGAGTTCGTTTTTAAAGATAGTTTGCAATTTGCGAGATTTCTTCCGGGGAAAAGGGCTGGGATTCAGGCCTCTGTCTGAGCTTGGAGAGGGGTTTACACATGACAGATCTTCCAAATCAAATCCATTTCTATAGTTCTTCCCCAGCTGCCTTTGGGGGTCCCTGTTTAGCCAGGCACAAGGCTTTCTGAACTGCCCCAGGCCAGTCTGGTTTTTTCTGATGGCCTGGCCTCTGAGGTCAGACCTTGGGCCAGGAGAGCTGGGTGGCAGGTGGCTACCCTCTGAGCCCCTTTTTAGAAACCAGCAGAAAGGGCTCACAAGTGCATTAGCATTATCATTAATTTTGTAAAAGTAAAACAAAAAGAGATTGTGCTATCTAGATGGTACAAAGATGAACAGCTTTGGTTTTCATTTCTGTTCCTAACTGCCTTTTCTCAGTGTGGTATTGGACAAGATTTCAGCTTGAAGCTTCACCACGAATTGATTTTTTGTTTGTTTTGTTTGTGTGTTTGTTTTGGGCCAATTTTAGATTCATGAGTGCACTTTTTTTTTCCTCAGTTAGTCCTAACTTCTAAAGAAGAAAAACCAAGAGACACATCCGGTGTAAATGTTGCAATATAAATTGTGTTTGCAGTCCCTTCCCCCCATCCCACTGCCCCCTATTTGAGTACACTGCACAAATAAAATGTTAGGGAGTTTAAAAAAAAACAATTTTTCTAACTTGTTGCTCATTTGTTGTAACTCAATAAAGCAAAGTCTAAACATTTTTATAACCTTT EMBV3_14776 GGATGAACTCTGCGGAAAGAAGACACAAGGCTTTCTCCACCTCTGGATCTCATTTGACAG Gene GeneID:782913|LOC782913:XM_002693653:242_cdna Constitutive 0 NULL GeneID:782913 15 GENE LOC782913 NULL similar to olfactory receptor MOR186-1 EMBV3_02633 AGCGGGGACAGCGGCGGCTCCGCCTACGTGCTTCGGAAGGAATATGGGGCAAATGTGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34708 CTTTGACATGATCAATATGCTGAAGCTTGGATGTTTACTGAACTGCAGCAGATGAGGCAA Variant GeneID:517560|PPWD1:NM_001046231:11_cdna 522^969 1 EMBV3_27537 GeneID:517560 20 GENE PPWD1 MGC137907 peptidylprolyl isomerase domain and WD repeat containing 1 EMBV3_34179 CCAATGGAAAGCCTGGTGACCCCAAGTCAGACAAATCTGACCGCCCCGTCTGCCGACACT Variant GeneID:525344|PRR3:NM_001034554:147_cdna 192^482 2 EMBV3_37619 GeneID:525344 23 GENE PRR3 MGC128443 proline rich 3 EMBV3_15431 TGCCATTCGCACGAAGTTGGAGCAGGCCCTGGACCCCCGCCCAATGGAAGGAGAACCCTC Variant GeneID:509530|BOLA1:NM_001034352:73_cdna 183^376 1 EMBV3_36890 GeneID:509530 3 GENE BOLA1 MGC127113 bolA homolog 1 (E. coli) EMBV3_03779 CCGTCTGACCGTAGAAACTGACGAAACTACACATAGGGAACTGTCTCTGAGGGGCTCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03880 TGTTTCATGCAGCACCATTCAGGTCTGTCTTTGATGGGCGTTTTGATCCTGCTACCCTGG Gene GeneID:407218|CALCB:NM_001001149:60_cdna Constitutive 0 NULL GeneID:407218 15 GENE CALCB CRSP1 MGC142514 calcitonin-related polypeptide beta EMBV3_30745 ACTAAAGGCCAAAGGTGAGAAGGTGGGAGGAAAGTCTGGCACTCAGATCTCCCCAGACAC Gene BVT0102_296004 - 0 NULL GK000011.2:100556481-100603003 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21703 CATTTTTATGAGGCCCTTGGTGAGGTCAAGAAGCTGAAAGGAAGAGCAGTTGGGGACTGG Gene BVV0102_172646 - 1 EMBV3_21792 GK000013.2:39836939-39883196 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11423 GGCAGAAATTTCTGAGTCTGTAGACAAAATCAAAGTGCATTGATCACTACACCAAACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33319 TTTGCCAAGCACTGCGTGAAATGCAACAAGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCT Variant GeneID:509056|FHL1:NM_001113259:19_cdna 693^879 2 EMBV3_19568 GeneID:509056 X GENE FHL1 MGC127148 four and a half LIM domains 1 EMBV3_00931 TGCACAGTGGCTTCTACGTGGCCATGAACCGCCTTGGCAGACTCTATGGGTCGCGGTTCT Gene GeneID:519657|FGF22:XM_002689141:125_cdna Constitutive 0 NULL GeneID:519657 7 GENE FGF22 NULL fibroblast growth factor 22 EMBV3_32871 AGCACCTCGCATTTGATGTGGAAAAGAATGAAGAGTCTCAGGGGTGGTGGGACCTGCTCT Gene GeneID:282711|EPAS1:NM_174725:33_cdna Constitutive 0 NULL GeneID:282711 11 GENE EPAS1 NULL endothelial PAS domain protein 1 EMBV3_23448 GTGCTGGGCTTCGGGGTAACGAATGTAATGAGACATGGTTTCTGCTTCCAGAGAACTCAG Gene BVT0102_111641 - 0 NULL GK000016.2:60651354-60747107 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13267 GTCTGTCACTGTTTCCATTGTGTCCCCATGTATCTGCCAGAAAGTGATGGGACTGGAAGC Gene BVV0102_382730 + 0 NULL GK000020.2:13407688-13413398 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24851 GATGATAATCAGAGCTGTACCCTTTCTGGAGGGAAACATCATGGACCTGTTGAAGCCCTG Gene GeneID:614159|LOC614159:XM_002697769:316_cdna Constitutive 0 NULL GeneID:614159 24 GENE LOC614159 NULL similar to Uncharacterized protein C18orf54 EMBV3_00046 GCCTGCACTCTCAACTCACTTTTTAACGGATCTTTTTATTCTGCCTGTCTGCTTGCTCTC Gene GeneID:504750|SH3GLB2:NM_001076802:28_cdna Constitutive 2 NULL GeneID:504750 11 GENE SH3GLB2 MGC142738 SH3-domain GRB2-like endophilin B2 EMBV3_30303 AGATGTGGCCAAGTATAGAAAAACTTGGTGCAGAGAATACAGAGTACCATGGCCCCAGGG Gene BVT0102_443098 - 1 EMBV3_00168 GK000001.2:73418805-73467723 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29361 CTATGATCCAGACGATTGCTCAGAAGCACAGGAAGTCCGCAGCCCAGATTTTGATCCGAT Gene GeneID:615959|AKR1E2:XM_002692189:78_cdna Constitutive 0 NULL GeneID:615959 13 GENE AKR1E2 AKR1CL2 aldo-keto reductase family 1, member E2 EMBV3_39522 GCCCGTGCCACAAGCATAGATGTTAAACTGGTTTCAATTACAACAAAGACAGCTGCTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22141 TGAGACATTGAACAACATGTAACGCCTGTTCCACACCCATGCTAGAACCATGCCATCTTG Gene BVV0101_002430 + 0 NULL GK000017.2:66349822-66356384 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077925 TCONS_00076015 2 XLOC_047174 XLOC_046709 Coding TCONS_00076015 XLOC_046709 NonCoding NonCoding - 17:66352885-66354912 - TSS57159 475 3 TCONS_00076015_2 44 0.591578947368421 2 0.766535044422507 0.000389349512779265 4.35697458039631e-20 8.24225853074287e-93 1.69052098797081e-70 1.28262127578148e-67 0 1.4659457432699e-42 0 7.03102903846815e-05 0 0 0.000591318398001642 1.40019109953694e-14 0 0 0 0 0 0.000381285681129618 0.000401369136867248 0.00259148861782586 0 0 0 0.000380961555937412 3.44337921690882e-05 0.00016499537006842 1.56346794653487e-05 1.02202330188503e-05 0 XM_005217912.1 DAO PREDICTED: Bos taurus D-amino-acid oxidase (DAO), transcript 0.0 848 100.00 0.987368421052632 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-07 59.0 69.35 0.387368421052632 0 noncoding 0 0 0 0 -0.0393766393092985 0.790353634351225 -0.0522118868483462 0.27965441735969 ATATTTGATGATGAACCACTTCAAATATTCCTGTCCCTACATGCCAGAAAACAGAGCACTTCCTGAATTAAACAATTTGACTTGCAATAGCATCAAAATGGATAAAACAGAATAAATTTAACAAGAGTCCAAGACATTTACAAACTATAAAACAATCCTGAAATAAATCAAAGATCTAAAAAATAGAGACATTCCATGACCATGAATCTGAAGATTTAAAACTGTTAAGGTGTCCATATCAGAACTCCTAAAATTGACCTCATAAATTTAACAAAATCCCTATCAAAAATCCCAGCTGGGATTTTAAAACTTACTACAAAGCTACAAGTAATCAAGATGGCATGGTTCTAGCATGGGTGTGGAACAGGCGTTACATGTTGTTCAATGTCTCACCTCTTTGGCCTCCTCCTGCCATGAAATCTGTTACAGCGCTCCCTCAAGTGCCTTCTGTGGCCTTACTGCACCAAGGTGTTGG TCONS_00077925 r 5' 0 TCONS_00077925 r 5' 0 EMBV3_18595 AGTGGGCGTCTCCTGTTAGCTGGCTATGATGACTTCAACTGTAACGTATGGGACACACTC Gene GeneID:525962|GNB4:NM_001099033:14_cdna UTR3_Alt 2 NULL GeneID:525962 1 GENE GNB4 MGC152413 guanine nucleotide binding protein (G protein), beta polypeptide 4 EMBV3_37935 TTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAG Gene BVT0102_447185 - 1 EMBV3_21725 GK000026.2:14012062-14042392 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00110189 TCONS_00222868 TCONS_00220566 TCONS_00238581 TCONS_00118040 TCONS_00210913 TCONS_00251678 TCONS_00226167 TCONS_00219592 TCONS_00179680 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00137167 TCONS_00174809 TCONS_00174808 TCONS_00132066 TCONS_00232829 TCONS_00174807 TCONS_00022895 TCONS_00250669 TCONS_00107436 TCONS_00198905 TCONS_00078426 TCONS_00203998 TCONS_00063197 TCONS_00170890 TCONS_00174805 TCONS_00171428 TCONS_00206300 TCONS_00207933 TCONS_00242416 TCONS_00205125 TCONS_00174806 TCONS_00153178 TCONS_00118487 TCONS_00056149 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00109592 TCONS_00242415 TCONS_00031759 TCONS_00001866 TCONS_00110426 TCONS_00206299 TCONS_00218430 TCONS_00246741 TCONS_00001865 47 XLOC_105290 XLOC_066093 XLOC_136175 XLOC_133883 XLOC_145248 XLOC_072206 XLOC_129423 XLOC_154619 XLOC_137940 XLOC_132911 XLOC_109452 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_083377 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_013565 XLOC_153612 XLOC_063346 XLOC_120558 XLOC_047314 XLOC_124314 XLOC_037924 XLOC_103679 XLOC_103815 XLOC_124877 XLOC_126448 XLOC_149080 XLOC_124587 XLOC_092943 XLOC_072644 XLOC_033952 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_065496 XLOC_149079 XLOC_018004 XLOC_066330 XLOC_131750 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_25360 GAGACCCCAATCCGCATGAGCGTCCTCTCGAGACATGAAAAATGCTGTAATTGGAAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10705 CCGAGCCCTGGACACCAACTACTGCTTCAGCTCCACAGAAAAGAACTGCTGTGTTCGTCA Gene GeneID:282089|TGFB1:NM_001166068:511_cdna Constitutive 0 NULL GeneID:282089 18 GENE TGFB1 NULL transforming growth factor, beta 1 EMBV3_36958 GGGAGCAGATGAAGCCCAATACAGGCTCTCACAAGTGCTACCATTCCATCAGTTTGAGTG Gene BVV0101_078762 + 0 NULL GK000001.2:70784213-70788693 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07477 GATCTGGGAATAGCAGAGATATATCCCCCACCCAACATGAAAGTGGCACCTATTTGTCTC Gene GeneID:506577|UBAP2:XM_002689799:88_cdna Constitutive 1 NULL GeneID:506577 8 GENE UBAP2 NULL ubiquitin associated protein 2 EMBV3_34348 CTCTGGAGCCTGCCTTCTCCAATGTGCTCACCCCGAACCGCATCCCCGAGTTCTTCATCC Gene GeneID:529849|FAM148A:NM_001046307:85_cdna Constitutive 0 NULL GeneID:529849 10 GENE FAM148A C2CD4B MGC128989 NLF1 C2 calcium-dependent domain containing 4B EMBV3_10345 TTAAGCTATTCAGCCAAGAGACGGTGATGAAATTCGTGCCACGGTACAGCCTTGTCCTGG Gene GeneID:535740|APMAP:NM_001035413:44_cdna Constitutive 1 NULL GeneID:535740 13 GENE APMAP C13H20ORF3 MGC127374 chromosome 20 open reading frame 3 ortholog EMBV3_24256 GACTGTAGTTCTGTGCGCCTTGAAGCTGTATGTGAACGACCACTACCCAAAGGGAAACTG Gene GeneID:539160|CAPZA3:NM_001040561:50_cdna Constitutive 0 NULL GeneID:539160 5 GENE CAPZA3 MGC133890 capping protein (actin filament) muscle Z-line, alpha 3 EMBV3_33643 CCACCGTCCATATTTAAGTGGAGCCCCTGCCAGATAGGAAAGCCCCAGGACGTCATTTTA Gene GeneID:538348|EHD2:NM_001046431:340_cdna Constitutive 0 NULL GeneID:538348 18 GENE EHD2 MGC129001 EH-domain containing 2 EMBV3_17114 TAGATCGCAGTATATTTGCGTGTTGCAGTCTGGTTCACAGAATTTCAGGTTTAAACAGGG Gene BVT0102_216832 + 0 NULL GK000020.2:35966672-35988523 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31944 AACTCTGCATGTAAGTGGACCCATGCAGTTCAAATCATGTTGTTCGGGGGTCAGTTGTAC Gene GeneID:282471|SLC18A2:NM_174653:15_cdna UTR3_Alt 2 NULL GeneID:282471 26 GENE SLC18A2 NULL solute carrier family 18 (vesicular monoamine), member 2 EMBV3_17452 CAGGCTTTGAATACTTAAGGCTTTAGAGGGAGAACCCAATTTTCAATTATGTTGGCTTTT Gene GeneID:507828|SFRS6:NM_001035272:934_cdna Constitutive 3 NULL GeneID:507828 13 GENE SFRS6 MGC128807 splicing factor, arginine/serine-rich 6 EMBV3_22412 TGTGCAGGGGTGAGTCTGCCTGAGGATGGGCAAGGTGACTGTGGATATGTGTGTAGATGA Gene BVT0102_325326 - 1 EMBV3_36723 GK000019.2:48825661-48853112 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40418 GGGACACCGCCGGCACTTTGATTTTCCTCTTATATCGCCATCATTATAATAAACGACTCT Gene GeneID:509522|FUCA1:NM_001046035:111_cdna Constitutive 0 NULL GeneID:509522 2 GENE FUCA1 MGC137270 fucosidase, alpha-L- 1, tissue EMBV3_00020 AGGGGTGCGCCCAAGCGGGGCTCAGGCAAGGATGGACACCACGCGGCCAGAACCACCCAC Variant GeneID:618684|MBP:XM_002697647:38_cdna 677^754 2 EMBV3_25719 GeneID:618684 24 GENE MBP NULL myelin basic protein EMBV3_06297 ATTAGTCACTTTAGCATCTGATACGTTATGGTGGCCAGTGTGATGTGCTCTAAAGGCGGC Gene BVT0102_155469 + 0 NULL GK000029.2:28481172-28485873 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40440 AGAAATGCTTGTCTCACCCCAGTGCTTTTCCTGGCTTGCCTTTCTGGTCAGCATCCATCG Gene BVT0102_080539 + 0 NULL GK000007.2:3838690-3855452 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215093 TCONS_00215102 TCONS_00215096 TCONS_00215103 TCONS_00215089 TCONS_00215092 TCONS_00215090 TCONS_00215097 TCONS_00215098 TCONS_00215091 TCONS_00215095 TCONS_00215100 TCONS_00215099 TCONS_00215101 TCONS_00215094 1 XLOC_130838 Coding TCONS_00215103 XLOC_130838 Coding Coding MAU2 7:3852669-3891730 = TSS160729 5184 1 TCONS_00215103_3 613 0.0437885802469136 19 0.867767537122376 0.00646793185630998 0.00302914431448814 0.00295082245689992 0.00365267805971818 0.00361835240046848 0.00162206735005774 0.00129253725730587 0.00216371345722393 0.00200141849914954 0.000560220069118566 1.31283932060268e-05 8.3593207981291e-09 0.00155939275410485 0.00176595977208502 0.000655100309263745 2.85103010678783e-08 3.45751030264851e-21 1.78759570979388e-09 0.00426361646552114 0.00638117377036355 0.000187902215400601 5.3226992889684e-18 0.000691711385880473 0.00100411837448861 0.00673913421137256 0.00405289464832129 0.0032447096619818 5.38303346118624e-06 5.03056902279896e-09 1.89753566933076e-14 XM_868130.6 MAU2 PREDICTED: Bos taurus MAU2 chromatid cohesion factor homolog (C. elegans) (MAU2), transcript variant X2, mRNA. 0.0 8258 100.00 0.883101851851852 NM_015329.3 MAU2 Homo sapiens MAU2 sister chromatid cohesion factor (MAU2), mRNA. 0.0 2796 83.85 0.501350308641975 TCONS_00215103_3 sp|Q9D2X5|SCC4_MOUSE SCC4_MOUSE MAU2 chromatid cohesion factor homolog; 0.0 1261 99.84 0.99673735725938 5 coding 0 0 1 1 -0.00265443070478277 0.980008593586365 0.00588247251012766 0.897177552782727 CTGTGGCGGCGGCTTGTTGTTGTGGAGGCTAAAATGGCGGCTCAGGCTGCGGCGGCGGCTCAGGCTGCGGCGGCCCAAGCAGCGCAGGCCGAGGCGGCTGAGTCGTGGTACCTGGCGCTCTTGGGCTTTGCCGAGCACTTCCGCACTTCCAGCCCGCCCAAGATCCGCCTGTGCGTGCACTGCTTGCAGGCCGTGTTCCCCTTCAAGCCGCCTCAGCGCATTGAGGCCCGAACACATCTGCAGCTCGGCTCGGTGCTCTACCACCACACCAAGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGTGGTTGATATCACAGCAAATCACACAGTTTGAAGATGTTAAGTTTGAAGCAGCAAGTCTTCTGTCCGAGTTATACTGTCAAGAGAATTCCGTGGATGCAGCAAAGCCGCTGCTGCGGAAAGCCATCCAGATCTCCCAGCAGACCCCGTACTGGCACTGCCGCCTGCTCTTCCAGCTCGCTCAACTGCACACACTTGAGAAGGACCTCGTGTCGGCCTGCGACCTGCTGGGTGTGGGGGCCGAGTATGCCCGGGTGGTGGGCTCTGAGTACACACGGGCACTGTTCCTGCTCAGCAAAGGCATGCTGCTGCTGATGGAGCGCAAGCTGCAGGAAGTCCACCCACTGCTGACCCTCTGTGGGCAGATAGTTGAGAACTGGCAAGGGAACCCCATCCAGAAAGAGTCTCTGCGTGTCTTCTTCCTGGTGCTCCAGGTGACCCACTACCTAGATGCCGGGCAGGTAAAGAGCGTGAAGCCATGCCTGAAGCAGCTGCAGCAGTGTATCCAGACCATTTCCACACTGCACGATGACGAGATCCTACCCAGCAACCCTGCTGACCTCTTCCACTGGCTGCCCAAGGAGCACATGTGCGTGCTTGTCTACCTGGTGACTGTGATGCACTCCATGCAAGCTGGCTACCTAGAGAAGGCGCAGAAGTACACAGACAAGGCCCTCATGCAGCTGGAGAAGCTCAAGATGCTCGACTGCAGCCCCATCCTGTCCTCCTTCCAAGTGATCCTGCTGGAGCACATCATCATGTGCCGGCTCGTCACAGGACACAAGGCCACTGCGCTGCAGGAGATCTCCCAGGTCTGTCAGCTGTGCCAGCAGTCGCCCCGGCTCTTCTCCAACCATGCGGCACAGCTGCACACGCTGCTGGGGCTGTACTGTGTCTCTGTCAACTGCATGGACAACGCTGAAGCCCAGTTCACCACAGCGTTGCGGCTCACAAATCACCAGGAGCTATGGGCCTTCATCGTGACCAACCTGGCGAGTGTGTATATACGGGAAGGAAATAGACACCAAGAGGTACTGTACAGTTTGTTGGAGAGGATCAATCCAGACCACAGCTTCCCTGTCAGCTCACACTGCCTGCGAGCAGCGGCTTTCTACGTGCGTGGGCTTTTCTCCTTCTTCCAGGGACGCTATAATGAGGCCAAGCGTTTTCTGCGGGAAACCCTGAAGATGTCCAACGCGGAGGACCTGAATCGGCTCACAGCCTGCTCCCTCGTGCTCCTAGGTCACATCTTCTACGTGTTGGGAAACCACAGGGAGAGCAACAACATGGTGGTGCCCGCCATGCAGCTGGCCAGCAAGATCCCGGACATGTCGGTGCAGCTGTGGTCGTCGGCCCTGCTCAGAGACCTGAATAAAGCCTGTGGGAATGCCATGGATGCCCACGAAGCCGCCCAGATGCACCAGAACTTCTCGCAGCAGCTACTCCAAGACCACATCGAGGCCTGCAGCCTCCCTGAGCACAACCTCATCACGTGGACAGACGGCCCGCCCCCCGTGCAGTTCCAAGCTCAGAACGGACCAAACACCAGCCTGGCCAGCCTCCTGTGAGACCCCTGCACGCGGCCTCTCAGCTTCTCCAAGCCTCCGTGGGGGCCTGGTGTGTCCCTGACTTCCACCCAGATGGCACTTGAGCTTTCCCTGAAGACGTGCTGGCGTGGCTGTCTTCAGGCTTCTTTCCTGTCTCCAGAGCAGCCTGGGTCCCTGGGGAGCGTGGAGGGCTGATTCCTGTCCTCCCAGGACAGGCCAGCTGGCCATTGTTGCCAGGGGCCAGGAGTCTGAGTGCTGTGGCTGCCTGTGGGCTGCTGGAGCTGACTACAGAGCCATCCTTCAAAGTGGGTTTGAACTGCTGGTCCTGCTTCCATGTCTGAGTCGTGTCGTCAAGAGAGTGTCTTGCTAGGGAAGCGGGTCTTGGCCATCAGCCTGGTCCTGACCCTGCACGCACGGGAGGTCGGTGCCACTGAGGTACCACATGACTTCCACAGGCCTCCTTGCTGGGCCAGAGTGTTTCCTCTGCTCATGGCAGCTTCCTGCACCCAGAGGCAAGATGCCAGTGTCTGACCCACAGTTGGAGGGAAGAAGTGATGGTGCCTGTCAGGGACAGAAATGCTTGTCTCACCCCAGTGCTTTTCCTGGCTTGCCTTTCTGGTCAGCATCCATCGTTTTGGCAGCTGGGGCGTCCAGGAACCTGACTTCTGAGCATCTGCACCTTGACCGGGCTCACTGTCTGGCTGTGGGAGTGCACCTGCTGGTGTTGACCTACGTGTGTGCCTGTGTTGCTTCCCAGCCAGAGCTGGCGCCTGGAGCTGAGACTCCTGTGTGTATCAGCCGCCTTCTGCCTGTCAGAGTCCACAGTGCAGGGCGGGAGGGACCCAGCTTGGCTCTACCACTTTGCAGGCAGCCATTCCCTTGGTACCCTGCCCTGTCTTTAGAGGGGAGGAGGAGGAGACCTACCTGCCTTGGGTCTCGGGACAGCATTGTAACCTCTTCCTGAGCTGGACCCCAGGAGGCTCTGCCAGGCCCAGACAGCCGTTTTGGTTCTGTGCTCCTCTTGAATAGTCAAGGCAATGCCCCAGGTGACAGTGACACTGGGGGCCGTCACGGCAGCAGCCTGGCCCCATTTGGCTTCCAGTGCCTGGGAGGGTCTCCCTGATGAGGGTGGTGTGCGGTTTTGCTAGTTATGACTGCTTGTTGGTTCAGGTCTTGTTACCCAACGCTGTGAAAGCTGCTTCTCAAAGCCTCAGTATCTGTGACGAAAGGAATGTTGGGATTGCTCAGGTCAGCTGCTTGGGCCCCAAGGCCTGGGTGTGCCTTAGCCACTAGCAGGGCTATCAACAGACCTCCTTGTTCTGGGTCACTGCCCACATCAGGGCCCTACTGCCCTCTTAGGGGCCAGCAACAGGCATGTAAGTAAGCTACTGAATGAAGGGACAGCCTGGTTGAAAGGACAGGCTGGCCAAGTTTTGTTTGAAAAGGACCTGCCCTCTCTGTGTCATCCTGGGTCACTCAAGAGTCCAGCCCTGTCCCGTGCTCCTTGGGGCTGCCCCTGGGTCTCTGAGGCCTGCAGAGGTGGTCTGCTACCTGTTCATGAGCTGTCCCCATCCCGTCTTCCTCCCCCTTTGACGGTCCCCCCGCAGAGGTCCTCTCTTCCACCAAAGGGATAGAGCACCTGTCTCGCTACAAGTTGCACCTGCTAGCCTGGACTCCACAGTGTGCAGCCTCTCCAGACCCACATTTCTTCAGTCCTGTTTTACATTGTTTGAGTATTTATTTAAACCTTTCTTTGCTTCTAGGGCATTTTGTATGTAGAGCAGTTGAAATAAGAACCTCAAAACTTAATGTCTTGTCCTGATGTTGAAGTGCTTTTAGTGACCACTTTGTTATCTATGTATATGTAAAGTTAAAGGTGAGTTCTTAAGTTTACAGTTAAAACTTCAGTACTCGATATTTAATGCCCCGCTCTAGCTATATGGACGCCAACCCGCATGTACATGCGTGCGCGCAGGCTTTGAACTTCCCCTCACTGCAGCGCCTTCAGCCACAGAAAGCTGTTGTAAATACCCTCCTGTAAGTCCAAGTTCAGTGCCTCACGGTTTCTCAATCATAAGAATTTAAGACAGACTGCACACAAGCCCCAGAGATCTATTACAGCCAGTGTCATATAGATGGGTGTTCAGAAAAATACAGAAACTCCAAACTCTTAAGCATACAGGGGATGTGAGGGCATAGCAGAAAGATTGCTCTTGGCAGGTTAATTGTTGAAAGCTGTTCTGACTCCCTTTTGTGTGCCTCCCGCTTCCTCCTGTCAGTGATGGTGGCCCTCAGGTCCTGTGGCTCTGAGGATGCTGGTCCAGGAGGTGCCGGTTCCCTCTCAGACACGTAGTTGGATCCCCACAGTCGCCCATGGGGGAGGCCAGGGTCCTCCCCCTGGGGTAAGCACTCCCCGCCCCACTTACTGGGAACACAGGCAGGGAAATCGGAAAAGGCTGCCTGGCACAGTGGGTGAGATGTGTTGGTTGCATCATCTTTGTTTCCCTAAAAGGTTTTTAATGTATGTTTGGCATACTGTCTTTTAATGGATTTTCAGTGTCTTAAGTTTTTAGCAGCCTGTATTTTCAGCTGGTGCTTTTAATCACAAAAAAAAATTTTTTTGTAAATACAAAGCATTCTTTAAAAGAGCCGTAGAACAGAGCTTCTTGTTTGTAGATTTTTTTTTCCTGTGTATTCAAAGTAAAATAACTTGCAGGAGCCGTCACTCACTGTGTCTTTGTTGTGCCGTGCACCCCTCACATGTGGCCTGGTGAAGACTCTTAAGCTTCCACGGCCAGCCGGCGGGGCCACAGGGCCTTCTGCTGTAACCCACAGGGCATGAGGATGCAGAGCCCCGGACCCTGCATGGAGGACCTGAGGGAAACGTGCATCTCCTCCCCCTCTAATGAGGACGGTCCTCGGTCCAGCCCTGCTGCAGGGAAGAGGGCCGCTGAGACGTGACAGGCACCGCCCACAGCCCTGCCTGTTCCTGGCTCTCCACAAGCCAGACTTCCTTGCATTCCCGGTGTCCTGTTTCCTGTGTTCTTAGAAAACACACGGGTCAGGCTTCATGTACCTGGGTGTTTTATTTTTCCTTTTTGAGGTGAAAGTCACGTAAAATTTAATGTCTACAATTGAGTGGCATTCAGTACATTTACTGTGTACAACCAGCACCTCTGTCTAGTTCCAGAACACTTCCATCACCACAAAAGGAGACGCCATCTCCATTAGCAGTCATTCCATTCTCTCCCCAGTCTCTGACAACCACTGATCGACTGTCAGTCTCTATGGATTTGATTGATCTGGGCATTTCACATAAATGGAATAGTG EMBV3_27337 CCTGCAGCTGGGATCTTAATTCCAAGACCAGGGACCAAATCCACGTCCCCTACATTGGAA Gene BVT0102_241856 + 0 NULL GK000003.2:41642412-42184096 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23617 GAAAGGTGGGCTATCATGGCATCTATCTGGGAACTGAAAGATGACTTGAAGGGTGATCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39805 ACAGTCCCTTTTTGGTTGGTGTCAGGGGAGGATTTGAAGTGAAGTGATGTTTACTGGGGC Gene GeneID:534370|FAM45A:NM_001076902:20_cdna Constitutive 2 NULL GeneID:534370 26 GENE FAM45A MGC142581 family with sequence similarity 45, member A EMBV3_15061 TTTAGTTCTTTCTCGTCGAATACTCCAAGGTCGTGGAAAACCCGAAGGACACCAGCTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31650 TTGACAAATCCCATGATCAAGCCATCCGTACCTACAAGGAGCACAAGGCATCCATGCACC Gene GeneID:507130|LTA4H:NM_001034280:953_cdna Constitutive 0 NULL GeneID:507130 5 GENE LTA4H MGC127925 leukotriene A4 hydrolase EMBV3_23305 GAGACTCAGAGGTGTTAGGTAACTCGCCCAAGGTCACACAGCTAACAAGGAATTAGATAT Gene BVT0102_176424 + 0 NULL GK000008.2:95552287-95761536 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228669 1 XLOC_138554 NonCoding TCONS_00228669 XLOC_138554 NonCoding NonCoding - 8:95564866-95643599 - TSS170420 2045 1 TCONS_00228669_2 101 0.356968215158924 3 0.974063913021389 0.000117993884074244 0.000127466218458539 0.000211367495772588 4.63556310601918e-05 7.73512434177852e-06 0.000473037095599418 0.00026764291909568 0.000372726644224011 0.000551319592270408 0.00230472273108413 3.1278344423156e-05 2.9096336179936e-06 0.000317695975756126 9.76586514210464e-06 9.70287287079362e-05 0 0 0 0.000161610124926008 6.70308694961645e-05 1.46149065371866e-05 0 4.93468574844398e-05 0 0.000312741986831967 0.000113924861719553 0.000109958025220912 0 3.56083476497698e-05 0 XR_227026.1 LOC101904961 PREDICTED: Bos taurus uncharacterized LOC101904961 (LOC101904961), 3e-11 75.2 76.24 0.0488997555012225 NM_032679.2 ZNF577 Homo sapiens zinc finger protein 577 (ZNF577), transcript variant 8e-19 100 72.06 0.0987775061124694 0 noncoding 0 0 0 0 -0.00841337906668638 0.971447169777509 0.00514544751166796 0.91112907919624 TACAGTTACTTTACAGACAGAAGAGACTGCAAATGTTATTAAGTTAGCATCTTGAGGTGGAGAAGCTTAGGCTGAATTGCCTGGGTGGGGCCTGAATGGAATCGTGTGTGTGCTTGTCAAAGGGAGATGAATAGGATAGAGAAGAAGACCACGTGACAGAAGCCAGGGGAGGCAGAGTCAGGGAGAAGGAGGCAGAGTCAGGGAGAAGGTGCCCAACACCGGCATTCAGGATGGAGGACGGGTCCCAAGCCAGAGAATGAAGGCAGGCACTAGAAGCTGGAAAGGGAAAGGAAATGAGTTTCTCTCTTAGAGACCCTGGAAGAAATGCAGCCCTACCAACACCTTGATTGTGGCTCAGCAAAATCCATTTTGGACTTCTGGCTTTTAGAATGATAAGAAAATTAATTTGTGTTGTTTTGAGCCACCACATTTGTGGCAATTTGTCAGAGCAGCCCTAGGAACCCGACACAGATGACTCCTAAAATTTCATTTTGAGCAACAAGATGTGAGATATCATATTCAAAGAGAGGGAAGTAGAAGGAAATAGAATTCTCTCAGACAGAACTGACTTCAAAGGACTGGCGTCTCCATCTTTTCTTCCCATCCCATCCCATCCCATCCCATCCTCACAGTCTCCAAAAAACAGGTCTTTCTCACCTGCTGTGCTGGACGCGGCTATCTGAGATAGAAACAGTAACTCTCTGGCTTGTATCCAGTCCATGAGGCTGGGGAAGGTGAGAAGAAATTAGGAACAGATGCCATCCTTTGACCTCCCGTGTTTTCTTCCTCCTATGTGAACACAGTACCAAAATCTTCTTGCTTCAACAAAAATAGCAAATTGACTACCTCCTATATCCTCCCCACTATTTCATTTACTTCCTTAACCCTCAAAAGTCTGGGCATGGTTATTATTATTCACAGGTTATGTATAAGGAAACTGAGACTCAGAGGTGTTAGGTAACTCGCCCAAGGTCACACAGCTAACAAGGAATTAGATATGAATTTTGTGCCAGGTCTGTGTGACTCCACATCCACTGCTTATTTTATTATCACACTGCCTATTAAGTTACAAGCTCCAGTACCTTGTGACAAAAAATGAACTCCTTCTAATATGAGCCTTTTTAATAGAGAAGTTCCAGGGAACAGGACGTCACCGGGGCCACACTGTCATTGTGGTTTACACTTCCCATGAACTCTTTCCAATAAACATTTCACTTAAATTTAATAAAGTAGTTAATAAAGCCATAAAGGTTAATTACTAGTTAAGGGGAAAATATGACTTCACATTGGTGAACATGTGAAAAATGAATCAACTTCGTTTTGCCATTAACCTAGGATTATACAGGCAATAAAGCATAATTATGGATTTAACATGTTAATTCCCAGTGGATTTAATAGCAGTGCTGTGAGATACATGACCAATCGCTAACCCATCTGACAAGCCTCAGACAGCACTAATCAAAATTAAATCACTTGGCCCACATGTGGAGGCAATATATCTTTCAAAATGAAATGACTATAATTTTTCATTGTGGAGTTATTATAAATGCCTCAGGATAGGGTGAAACGAAGAGACAGGAAAAGTGGGGGACATAATCTGTGATCTCAATCTGACATTTACTCTGGTAGCTACGTTAAAAGAAAATAACTTTTTTCCCCCCATAAATTTAAGGTTCTCTGCAGGGTTTTATTGCTTACTCTAATGGTTCATGATTTACCTATAATTTGTAGAATAAATCAATGCATCCACATCCCTTAAAATTTTTATACCTTTTTTCCTTTGCCTTTCCAAAAATAATATATTGGCAGTCAGCCCTTTGTGACACTAAGATTCTATATTTCAACAACTGTGTTTCATCAGTGAGACCAATTCTTAAGAAACAGAATCTTAAAATAACACTGTATTTCACTTACCATGATTTGTACCACCTGGTAACCATAAAAGAAAAGTTCTTACTACTTGAAGAAAAGCAGTCTGAAAATGATGGACTATGGGCCAAATCTGGCCCACCAACTATTTTTGTAAATAAAGTTTTATTGGCATG TCONS_00226293 TCONS_00226294 TCONS_00226295 TCONS_00226296 r 3' 151011 TCONS_00226297 r 5' 117938 EMBV3_20057 AGCCAGGTGAGTGCTGTTTGACCTGGAGATAAGTCAGCCCAATTGAGTCTTTGCTAGGAC Gene GeneID:527433|KBP:NM_001034559:344_cdna Constitutive 0 NULL GeneID:527433 28 GENE KBP KIAA1279 MGC127709 KIAA1279 EMBV3_28439 ACCAAGAAAGGACAAAGGCAATCCCCAAATTCTGAATTCTGAGCCAGCCCAACCTCAGGC Gene GeneID:513977|FBXW4:XM_002698441:427_cdna Constitutive 0 NULL GeneID:513977 26 GENE FBXW4 MGC151643 F-box and WD repeat domain containing 4 EMBV3_09932 GAGTTTCTCTGAAGCAGAATGACAGACACCATCATAACTTCAGGACAAAAGCCAATTCTG Gene GeneID:614557|RWDD3:NM_001098128:198_cdna Constitutive 0 NULL GeneID:614557 3 GENE RWDD3 NULL RWD domain containing 3 EMBV3_12215 ACACAATCTAGGGGAGTTTCTCAGCAACTTTTACAATTCTGGAGCCATTAGCCAAACTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13378 CTGGGGTGAATTTTGCTTAGAATATCCCCAGTTAGCCACTCGGGCTGGGCGTAAAAATGG Gene GeneID:100125312|UBAC2:NM_001103344:2_cdna UTR3_Alt 5 NULL GeneID:100125312 12 GENE UBAC2 MGC142780 UBA domain containing 2 EMBV3_02724 CGGGGGTGCCATCCAGCCCCTGGTTGAGCTCCTGTCCAACCTGTGCCGGAACAAGAACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27848 TGGAGGAGCCCGAAGACTGTGATTCCTACTGCAAGGCCTCCAAAGGGAAGCTGAAGATTA Gene GeneID:522767|NTN1:XM_002695878:387_cdna Constitutive 0 NULL GeneID:522767 19 GENE NTN1 NULL netrin 1 EMBV3_08723 CTTCTCAACTGGTGGGAGAAAACCGGACCATGACCATCCACAACAGCATGTTCTTCAGCA Gene GeneID:510522|FGB:NM_001142917:20_cdna UTR3_Alt 3 NULL GeneID:510522 17 GENE FGB NULL fibrinogen beta chain EMBV3_02416 CCGGGACTTTATCGTTCAGTCTCGTCCTGAATTTGCAACTCTTGACTTTATTCTCGTGAC Gene GeneID:530316|UBXN2B:XM_002692664:14_cdna Constitutive 0 NULL GeneID:530316 14 GENE UBXN2B NULL UBX domain protein 2B EMBV3_14683 CCTGTGTTCCCAGTTGAATCACTAGCCTGGATTTTTCTGATCCAAGCAAACAATTGTTGC Gene GeneID:782446|DIO1:NM_001122593:124_cdna Constitutive 2 NULL GeneID:782446 3 GENE DIO1 NULL deiodinase, iodothyronine, type I EMBV3_37076 ATGTCTGGCCTCTCAGACATGCTGAAGCACTGCAAGCGGCTGAAGGACCTCAGGTTGGAG Gene GeneID:789838|FBXL18:XM_002698160:626_cdna Constitutive 0 NULL GeneID:789838 25 GENE FBXL18 NULL F-box and leucine-rich repeat protein 18 EMBV3_33041 AACCCAGAGAAGAAGTGGGTGCGAGAGTACATCAACGCTTTGGAGTTGAGCTAGGGTGGA Gene GeneID:327712|CCL5:NM_175827:191_cdna Constitutive 1 NULL GeneID:327712 19 GENE CCL5 MGC127014 RANTES chemokine (C-C motif) ligand 5 EMBV3_00114 CCACCTGCTGGCCAACGCCTGCCTACCTGTGCGCACCACCAACAAGATCTCCAAGCAGTA Gene BVT0102_348848 + 0 NULL GK000018.2:55338828-55366507 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084161 1 XLOC_051474 Coding TCONS_00084161 XLOC_051474 Coding Coding C18H19orf68 18:55336249-55344709 o TSS63105 621 1 TCONS_00084161_1 180 2 0.926823501595933 0 0 2.99925363432735e-05 0 3.55826102814598e-05 0 0.000199684284118149 0 0 0 0.000194843459093985 0 0 0 0 0 0 0 0.000223455663359104 7.85067723332003e-105 0.000833308409588713 0 0 0 0 0 0 3.1062950096953e-36 0 0 XM_005195393.1 C18H19orf68 PREDICTED: Bos taurus chromosome 18 open reading frame, human C19orf68 (C18H19orf68), transcript variant X1, mRNA. 0.0 1000 100.00 0.890499194847021 XM_005275847.1 C19orf68 PREDICTED: Homo sapiens chromosome 19 open reading frame 68 (C19orf68), transcript variant X2, mRNA. 0.0 866 95.56 0.867954911433172 TCONS_00084161_1 sp|Q86XI8|CS068_HUMAN CS068_HUMAN Uncharacterized protein C19orf68; 2e-126 374 100.00 0.988888888888889 0 coding 0 0 0 0 -0.00237823844997198 0.985886219059391 0.00782245403108553 0.900296170505613 CAAGCGGGAGACCTCCTCGGGAGAGGACGGATCTGATATCCAGGTGTCCTCCCCACCCCTCCCACCCAGGCGCCCCAGGATGGAGCCTCCACCAGGCACAGCGGCGGGGCAGGAGGAGCAGGAGCTGCGGGAGAGGGCCTTCTTCTCGTGGGCCGAGTTCAGTCGCTTCTTCGACGCGTGGTGCCAGCAGCGACTGGCACTCTTCTTCGTCAAGAGCTCCATGCACCTGGCGCGCTGCCGCTGGGCCAGCGCGCCCCCGCTCTACACGCTCATCGACGTGCTCAAGTACAGCTACGTGCGGCTGGTGTGCAAGGACGTGCGCGCGCCCAGCCGGCCCGCCGTGGGGCCCCCCCAGCCTGGCTGCCCGGCCTTCATCATCGTCAAGCTGAGTCCGCTGCGGGACCGCCTTGTGGTGACGGAGTGCCAGCTGACTCACTCGCACCCGGCCTGCCCGCTCGAGTTCGCCTACTACTTCCGCCCGGGCCACCTGCTGGCCAACGCCTGCCTACCTGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCGGCCGACGTGCGCCGCCTGCTCTCCTACTGCAAGGGCCGCGACCACGGCGTTCTGGACGCCCTGCACGT TCONS_00084160 s 5' 0 TCONS_00084160 s 5' 0 EMBV3_15994 CTGTACTCGATTTCATTGTTCCCATACAAATTGCCATAGAAGGTAGCATGTAAGCTAGAG Gene GeneID:533109|TYW1:XM_002698109:179_cdna Constitutive 0 NULL GeneID:533109 25 GENE TYW1 NULL tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) EMBV3_33039 GACAACCAAATTATTGGAACAGGAAAGGATTTAGGAGAGAAGGATATATGATCTAAGTGG Gene GeneID:504967|NEDD9:NM_001101847:193_cdna Constitutive 0 NULL GeneID:504967 23 GENE NEDD9 MGC155329 neural precursor cell expressed, developmentally down-regulated 9 EMBV3_41407 CAAGAGCAGGATCAGCACATCTTCTGCTGAAAAGACATCAACTCATCTCTGCTCAATAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16041 CGGCCATTGTGGCCAAGCAGGTGCTTCTGGTGAAATACCTGGCCTTTCTCCGCAAGCGGA Variant GeneID:767925|RPL13A:NM_001076998:448_cdna 111^176 1 EMBV3_29583 GeneID:767925 18 GENE RPL13A MGC128198 ribosomal protein L13a EMBV3_30129 CTCTTCGTGGTGGCGCTGAACGGCTTCCTCTTCGCTGGCCTGATGTTCACGATTCAAATA Gene GeneID:531175|LOC531175:XM_002687993:114_cdna Constitutive 0 NULL GeneID:531175 5 GENE LOC531175 NULL similar to membrane-associated DHHC26 zinc finger protein EMBV3_25398 GGAATTAGAGAGTGAAGAGGAGAGAAGCCGGAAAATCCAGGGACTCCTAAAGTCGTGCAC Gene GeneID:615348|PPP1R14A:XM_002694966:118_cdna Constitutive 1 NULL GeneID:615348 18 GENE PPP1R14A NULL protein phosphatase 1, regulatory (inhibitor) subunit 14A EMBV3_40501 TGACAGCAAAGGAACCCAGCACAGTGACAGATGCAGGAGAGCTGTATGTTTGGGGAAGCA Variant GeneID:534377|SERGEF:NM_001076021:169_cdna 648^710 2 EMBV3_28005 GeneID:534377 15 GENE SERGEF MGC128942 secretion regulating guanine nucleotide exchange factor EMBV3_22513 TTCCAGGTCTCCTTCCAGCACCCACACAAGCTGGCAGCGGACCCCAGTCTCCATCACCGC Variant GeneID:534796|LOC534796:XM_002699739:182_cdna 547^596 1 EMBV3_13380 GeneID:534796 X GENE LOC534796 NULL similar to RIKEN cDNA 1810009O10 gene EMBV3_07064 AGGAAGAAGCACTCCAGAGACGACTCAGTGAGAGGCGCAAAAAGGCTTCAGCATGGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15824 CCTTGGTCGAACTATCACCCTGCAACCTGGATCCCCATGCAATGATTTTAGAGGCTACTG Gene GeneID:282132|ADAM10:NM_174496:22_cdna Constitutive 0 NULL GeneID:282132 10 GENE ADAM10 NULL ADAM metallopeptidase domain 10 EMBV3_22862 CCACTGCCTGGCCTTTTTCTTCGGAGCTTGTTGTCTTTTTCGCTATATTAGACTCTGCAG Gene GeneID:509039|TCF12:NM_001077885:43_cdna Constitutive 0 NULL GeneID:509039 10 GENE TCF12 MGC142325 transcription factor 12 EMBV3_32269 CCTTTGGTATTTGTCTACACGTGGCCATCTCCCTCTATACCCCTGGATAAGTTTCTGGCC Gene GeneID:785082|LOC785082:XM_002690770:542_cdna Constitutive 0 NULL GeneID:785082 10 GENE LOC785082 NULL similar to olfactory receptor 1306 EMBV3_19880 CTCCAGCAAGCAATCTCCCCTACAGAAGCAGATCACCTCTTTTTCCAGTGACAGGGAGCT Gene GeneID:787976|LOC787976:XM_002700162:75_cdna Constitutive 0 NULL GeneID:787976 X GENE LOC787976 NULL similar to forkhead box R2 EMBV3_20600 GTTTTCCAGGACCGGCGCCTTTGTGGATTACTTTTGGAAATCTGGCCGCATCTCTGTGCA Gene BVT0102_243022 + 0 NULL GK000010.2:82102224-82128378 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014996 TCONS_00015000 TCONS_00014999 1 XLOC_008402 Coding TCONS_00015000 XLOC_008402 Coding Coding SMOC1 10:82052402-82103778 j TSS10696 3192 1 TCONS_00015000_3 338 0.0137844611528822 8 0.938024330900243 0.000205017356222595 9.9203376868453e-17 0.000361174205901865 8.98964034521765e-53 8.37138410242244e-08 3.34688104063679e-61 0.000118569624135716 0.000122402061037273 0.000142952146960146 5.49871127533921e-26 1.44220590483434e-21 1.27907702136714e-27 9.57160928076204e-12 5.20484644254029e-10 1.44030392984386e-05 0.000199092563657794 6.16024893446455e-17 0.000471608531052102 0.000291314505061459 1.363567405948e-05 0.000591630813354369 4.00702601194519e-11 1.36428730667363e-13 6.53802078454168e-05 0.000332278359647969 5.70758414749296e-05 0.000407891416764795 2.29753182687975e-10 8.60899166151508e-18 1.23415561289983e-31 XM_005211950.1 SMOC1 PREDICTED: Bos taurus SPARC related modular calcium binding 1 (SMOC1), transcript variant X2, mRNA. 0.0 4846 100.00 0.841478696741855 NM_022137.5 SMOC1 Homo sapiens SPARC related modular calcium binding 1 (SMOC1), 0.0 1864 78.90 0.676378446115288 TCONS_00015000_3 sp|Q9H4F8|SMOC1_HUMAN SMOC1_HUMAN SPARC-related modular calcium-binding protein 1; 4e-180 511 96.17 0.769230769230769 2 coding 0 1 1 1 0.118012013428646 0.295479560475705 -0.0411425928018799 0.414386354697582 GTGCAAAGGCCTGGCAGGGGGGAGGGAAAGATGCTAGGGCTCACTTGCCCCCTGGAGACTTGACTTCTGCCCAGTGGCCTCTCTTTCCTTCTACTTTGGAGGGTTCCCAGAGGTGCTGCAGTCTGTGGGGTCACAAAGAGTCGAACACAACCGAACAACAGCAGAGGTGTTGAATCTCTTCTCTTTGTCTGCCGCAGGCAGGGCAGTGAGAAGCCACCTGTAGGAAGGCCCACCTGAAGCCACACCTGTCCAGGAAGCTGGGGTTTGAATGGGGACAGGGTGCGAGAGGGCATTGGTAATATCCTGTGTCGGCCCCGCCGAGGTGCCTCTTCAGCTGCCACTTGAGAATGGAATGTGCTCCAGAGGGCAGCAGGTGGGAAGACACAAAGGGCCCTTGTCTGAGCTCGTGCCCACATGGGGGGTCTCCCAGAAGGCATCTCCCGAGAGCCGCAGCTCCAGAGACCTGCCCAGAGGGACGCTCGGCCCAGAGGACGTCCAGAAAGAAGATGATGGGTCTAAGCCGACACCCACGATGGAGACCCAGCCGGTGTTCGATGGAGACGAAATCACAGCTCCCACTCTCTGGATTAAGCACTTGGTAATCAAGGACTCCAAACTGAACAACACCAACATAAGAAATTCAGAGAAAGTTCACTCGTGTGACCAGGAGAGACAGAGCGCCCTGGAAGAGGCCCGGCAGAACCCCCGCGAGGGCATTGTGATCCCTGAGTGTGCTCCTGGGGGACTCTATAAACCAGTGCAGTGCCACCAGTCCACTGGCTACTGCTGGTGTGTGCTGGTGGACACTGGGCGTCCGCTGCCGGGGACCTCCACACGCTACGTGATGCCCAGTTGTGAGAGTGATGCCAGGGCTAAGAGTGCGGAGGTGGAGGACCCCTTCAAGGACAGGGAGCTGCCAGGCTGTCCAGAAGGGAAGAAACTGGAATTTATCACCAGCCTACTGGACGCCCTCACCACTGACATGGTGCAGGCCATTAACTCAGCAGCGCCCACTGGAGGTGGGAGGTTCTCGGAGCCAGACCCCAGCCACACCCTGGAGGAGCGCGTGGTGCACTGGTATTTCAGCCAGCTGGACAGCAACAGCAGCAGCGACATCAACAAGCGCGAGATGAAGCCCTTCAAGCGCTACGTAAAGAAGAAAGCCAAGCCCAAGAAATGTGCCCGGCGTTTCACTGACTACTGTGACCTGAACAAGGACAAGGTCATCTCACTGCCCGAGCTGAAGGGCTGCCTGGGTGTTAGCAAAGAAGGACGCCTCGTCTAAGGAGCAGAAAACCAAAGGGCAGGTGGAGAGACCAGGGAGGCAGGATGGATCATCAGACAGCTAACCTTCGACGTTGCCACGGCCCAGCCACATCCCATGTAACATAAGTGGTGCCCATCGTGTTTGCACTTTTAATAACTCTTATTTGTGTGTTTTCTTTTTCGGCTTCATTTTTAAACACCAGTATCTAATATTGCAGTGGGAAAAGGAAAGGGAAGAAAGACTATTCTCTTTTATTGTTAAGTTTTTGGATCTGCTACTGACAACTTTTAGGGTTTGGAGGGCGGGGAGCTTTCTGGGACTGAGAAGAAAGAGATTTATATACTGTATATAAATATATATGTAAATTGTATAGTTCTTTTGTACAGGTGTTGGCATTGCTATCTGTTTATTCTCCTCCCTCTCCCTGCTCTGAGCTGTGAGAGCTCCGGACACACAGCCCCACTCTCTAGAACCCAGGACTCTATCCCTGGCCAGCCTGAATTCCACTGTGATCACAGTGCAGACTCCATGGGTATCTTTTCTGGTGGGAGGAAGGGACCACCTTCTGCCGTGGCTGTCAGAGCGGCAAGTCACTTGGCGGTTGACCTTCTCAAGGGAGGGAGTGGACATTGCAGGACAATGGGAGTGGCCCCTGGAGGGAGGCCTGTAGCCCTCACAAGTCCCATCCTCCAACGCCCATGTGGTCAGGCCATCCAGACCCCCAGGTGGCCCAGACTCAGTGGGTGCAGTGTTGTTGGCGCCCGCTGAACAAATTGCCCTAAGGATTTGCGTTAGGGTCCCTTGAAACATTTCCAGCTACGTTTAGCCTCTACTCCACGTAAAGCAGGAGAGGGGAGGCAGAGAAGAAAAAGACACCCCGCGGGACCTTTTATTTAGTAGTTAAATGTAATATCTGAGCAGTGGAGGTAGAAGCACAGAAGGCCTGTCCTGGTGAGTCCAGTGCCCACCCAAGGCTTCTCACCTGTCACACACCCATGAATGAGGCTTCCTGAGACAGCGCCCAGTGCCAAGGTCAGACTAGGCAGCTACTTCTGCAGTCCTCTTTCTCCCCTCCTGTTCTCCAGCTCAGCGTAAGCCTGTGGGAAGAGTTGTGTCCATCACCTTGTTGGTCATTCAACCTTTTCTATTTTTTTCTTTTTAAACTCAGTACCGAGGTTCTTCCTGTTTTCCTAAACGCTCTTATGGGCTTCCAGGCTTGAGGCCAGTTCCAGGGCCAAATTCATGTTGGGCCTGTTACTTCTGCATCCCTTGGAAGTGAGGACGGAATGGCCCAGCCATGGGGAAATCCAGGCCTAGCTTCCCACAGGCGTTTTACTGTGATTCCAACGTGGACCGCCCAGCCTTCTGGTCATACCCCAGCTTCCTCTTGCCCGGGGTGGCAGGGGTGGGGGCATGCCCATCCGACAGTCATCCAACAAAGGGTGCCGGGTGACACCGAGCCCTCCTTTCCGTGAGCAGCCAGAGCGGCAGGGAGGGAGGGTGGGCAGTTTTCCAGGACCGGCGCCTTTGTGGATTACTTTTGGAAATCTGGCCGCATCTCTGTGCATCTCCTACCCCATCCCATCCTCTGACTGGAGAAGGTTCTTGCTGTCCTAATGAAAGTCCCAGAGGTTGTGTCAGGGTGACTGGAGACCCCATCCCAACATGGTAGGATGGAACGAGAGCCCTGGCCCATCAGTCTGGACCAGAAAGCCCCGTGTGCTGGCTGGGTGGACTTTCTGGGAGACCTCCGCCTCCTTCCCTGCCCTGAAGGAAGCACCTCCGTGAAGAAAGTTGGAATCTCCCTGGGACGTCTTCTCTCTCACACACGTGTGGAGGCTGAGTTGTGTGGTTTTCCTTTGTGAGGAGGGAGGGAGACCGTTTGTAGCTTGTTTTATAAAAAATAAAAAATGCGTAAACCTTGG EMBV3_39095 AGTCTGGAGGCCAGAAGTCTGAAATCTGTATCTCCGGGCCAAAGTCAAGGTGTCAGCAGT Gene BVV0102_229883 + 0 NULL GK000017.2:65616738-65628885 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075981 TCONS_00075980 1 XLOC_046699 NonCoding TCONS_00075981 XLOC_046699 NonCoding NonCoding - 17:65616909-65624469 - TSS57140 671 2 TCONS_00075981_1 65 0.60655737704918 3 0.911628522291308 0 7.43027769364585e-05 0 0 0 0 5.18430991035334e-05 0 0 0 1.35250318938056e-05 2.64580867650911e-05 0 0 0 0.000431765743105982 0 0.000745684308423824 1.03372879430428e-05 0.00061055901390073 0 0.00076950260279311 0.000204757067290894 0.00012416716045781 0 0 0 0.00027149242547998 0.000332547890071269 0.000718737411913798 XR_228312.1 LOC101903196 PREDICTED: Bos taurus uncharacterized LOC101903196 (LOC101903196), 0.0 980 100.00 0.807749627421759 NM_001164479.1 C5orf63 Homo sapiens chromosome 5 open reading frame 63 (C5orf63), 7e-20 102 74.59 0.263785394932936 0 noncoding 0 0 1 1 0.0598295345336871 0.606800037253281 0.0871602233897094 0.200555920272184 GTGGCTACCTGAGGGAGGCAGGCAGGTTGGCAGTCAGCTGCATCCCACGTGCACAGAGAGAATTCCGAAAGAATGCCGCTCGGTGGCAGTGAGGCAGGGGCCTGGATTAGCGTGGTTGCTTGAACTCTGCTGTTTCATCACTCGGGCTGGTTCCCTTCCCACGGCGGAATTTCTAAAGACAGGCGCCACCACGAGCACACAGCGCCCTTTCTGGAAAACAGGGGGCACAGGTTCGATCCCTGGTCTGGGAAGAGCCCACAAACTGCATGGTGCAGCCAAAAAAAAGAAAAGGAAGAAGAGACGGAGAGAGACTTCATGTACACAGAGGAGAAGACCATGTGAAGACGGAGGCAGAGGCCAGGGTTATGCAGCCGCAGTCTGGGACATCTGGAGCCATCAGAAGCCAGAAGAGACAAGGGACAAATTCTCCTCTAGGGCCCTCCCAGCATGTGCAGCACTGCTGACACCTTGACTTTGGCCCGGAGATACAGATTTCAGACTTCTGGCCTCCAGACTGGGAGAATAAATTTCAGTTGTTTGAAACTGGCAAGTTTGTGGTCATTTGTTACAGCAGCCACTGGAAACTTATACAGAAGTATGGCCCATGGCCATACAGCTATGAAGTGGCTCAAAACATAGTAAGTGCTCAATAAACGTTGGTGTGGTTGTTT TCONS_00077867 r 5' 172 TCONS_00077867 r 5' 172 EMBV3_00979 GGACGAACAGATTTGACCAGTTTTGGGCCATCAATCGGAAACTCATGGAATATCCTGCAG Gene GeneID:100336714|LOC100336714:XM_002690137:15_cdna UTR3_Alt 2 NULL GeneID:100336714 9 GENE LOC100336714 NULL autophagy protein 5-like EMBV3_18034 GACTATGCACCACCTCGCTGGGCTCGGCAGGTTTGAACAGGCCATCCAGGCAGCCAGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24331 TTCCCCTGGATGGAGAGTAACCGCAGATACACAAAGGACAGGTTCACAGGTCACCCCTAT Gene GeneID:505304|TLX1:XM_002698436:413_cdna Constitutive 0 NULL GeneID:505304 26 GENE TLX1 NULL T-cell leukemia homeobox 1 EMBV3_29686 TGAAGATGTGAATAAACAGCTGGACAAAATGTGGCATTCAAGATGTACTTGGGCATCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01227 GTACTATGCATTTACTCCAAACTCTGTCTTCAAATTGGTTCTGCCTCTTGGCTCAGAACC Gene BVT0102_168942 + 0 NULL GK000007.2:77337011-77495490 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218365 TCONS_00140862 2 XLOC_131688 XLOC_085291 NonCoding TCONS_00218365 XLOC_131688 NonCoding NonCoding - 7:112458078-112460502 - TSS162364 2424 1 TCONS_00218365_4 125 0.555280528052805 1 0 8.49947711030207e-05 4.14537949578765e-05 4.19939500791932e-05 2.68334184162202e-05 1.60064390559412e-05 2.1396583405774e-05 3.23570469465267e-05 8.54018991074826e-06 3.54561071205002e-05 1.91033239422395e-05 1.91498120378084e-05 1.65185522638448e-05 2.95924338489765e-06 2.23166967767987e-05 7.75369836226271e-06 0.000498521655694213 2.45944130321183e-05 0.000445072464843434 4.75787388217088e-05 2.08218992253803e-05 3.13072631910376e-06 0.000215405253960392 0.00024733179627764 0.000185674041328044 0.000131480520579813 3.8048126290649e-05 5.19676777673821e-05 3.72881098152428e-05 4.26754456610831e-05 0.000328374007981141 XM_005201359.1 KIAA2018 PREDICTED: Bos taurus KIAA2018 ortholog (KIAA2018), transcript 2e-173 614 87.93 0.202145214521452 0 noncoding ATCTTGGCACCAAATGGTTCATCTTGGGCCATAAAATGATTAACTTGAATCCTGAAGAAGGGCAGATCACCATACAAATAGTTTCATTTACATAGATCAGGGGAACAATATCTGAGTATAACGTACTGGTTTGTCAAGTAGGTTCTGAGCCAAGAGGCGGAACTGACTTGAAGACAGAGTTTGGGGTAAATGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAGAAATGTATTGGTTATCTCTAGGTTTGACAAGAGTTAACTTCATGTGAAACCAGGTGTCATTATGGCAACACAGTCTTTTAAGAGAAACCTACTTTTAAATTTGCCGCTTGAGAGAGATAAACATGTCTGACACTTGCAGGCTATTTTCTTCGTTTGGAGACCCCTGGCCTTCCTGCCTGTTACCCTCATGTGTCTCCTGCAGGCTGGAGGCGGGTTCTTTACTGCAGAGCCACTGGTGAAGCCCTTCTATGCTGTAATACCATTAAACTGAAGATAAATTTCAAGAACGTGTTAGGCCTTCTAGATCTGCTCAGCCACCAGCTGAATGACCTCACCTGATACCATGTGGAGTACAAGCCATCTAGCCCAGCCCTGGCCGGCTGAATCATGAGACTGAGTAAAACAGTGGCTGTTTTGAATCACTGAGTCTTGGGGCAATTTGTTACACAGGGATAACGAATGAACACCTATCACCTGAACCTATAACACAGCTGGTGTTCAGTGTTTATTGGTAACTTTACATTTCAGAACCACCTCCATAGTTAGCTAAACTCGCATTTCATAGTTTGAAACATTCCAACTCTGATAAAACACCGATCTGCTTAAGACAAGTCATTCTACTGACCCTGCTTCAGGGAAATAAATTATAATTTGAATGCATTCCATCTTCACTTTTAAACAATGAGACCTGAATTTTACATTCTAGTCAGATGCTTTGGGGAGTTTGTAAATCATTTTGTTAATCCTAACTGCATGCTTTCAATAAGATGTAGTTGGTTATTCTAAACAGTAGTTGTCATTGAGAAACTGAACTGAATGAGCACCTGAACATATTCCAGAGATGGTACTGAAAATTTTTTCATGAGTTTTTCTTATATTTGCTATATTTAGAATGCAACCCCTTGAATTTATCCCAGTTGCTCAAAGTTTCATTAAATGTTTCTGTACAGGCTTTCTTCCTTTTAAAAGCCTGCTATTTATTCTCTGAACAGCCAAGCATGGCTTGTAGTCTGACAGCCTTGTTAGGGAACCCATGAGACATTTCCTCGGGTCTTAAAAAATAGGTATAATGGTTTTCTCTAAAGCAGTTGTTTTTAATCTCACGGCAGAACACTGAACAGAGCGGATTTTTGTGTTAAGATTCTAGGAAGCTGAGAACCTGCCTTCATCAACTGCTAGTTTTCTAATTTCTAATTTAAGGCTTATTTATCGAGTACCTACACAACAGGTCTTAGTCGTAGTGATCCTGACGTCACAACTAAGATCTGTTGGTGGTATATTAAAAAGCAGAGACATCACTTTGCGAACAAAGGTCCATCTAGTCAAGGCTATGGTTTTTCCAGTAGTCATGTACAGATGTGAGAGTTGGACTATAAAGATGAGTGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTCAACTACAAGGAGATACAACCAGTCCATCCTAAAAGAAATCAATCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTGATGTGAAGAACTGACTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGATGACAGAGAATGAGATGGCTGGATGGCATCATGAGCTTGATGGACATGAGTCTGAGTGAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCAGTCCATGGGGACCAACAGAGTCAGTCGTGGCTGAGTGACTGGACGGAACTGATTGAGTGCCTATCAACTTCTCTACCTGTGATACTCACTTGGCCTCAAAACAATCCTTCTGGGGTTATTACCCCATTTCAGAAATGCAAAAAGTATAACTCAGTAAGGTCCAGTAACTGTCCCAAGGTCACAAAGTTTAGAGAAGAAAGGTATAAATTCATAGGATTTGAACTCATATATATTGACACCAAGATTTATACCACCTTCACTGTGCCTCTCTCCTTCATAAATTAAATATTTACTACTATCCACATGAAATAAGAAAAAATGACTTAAATTCTAAAACAAAATCTAAAGTCTTAAAGTCTAAAATCTTAATAATGCTGGATTACTATAGCTGAATTATGGTTGCAGATTAAATCTAGTTGTGATGGCTATTTTTTATAAGGACTGTGAAAGTTGCTTAAAATTGAAAAATTGTGT TCONS_00214936 TCONS_00214938 TCONS_00214939 TCONS_00214940 TCONS_00214942 TCONS_00214943 r 3' 99314 TCONS_00214936 TCONS_00214938 TCONS_00214939 TCONS_00214940 TCONS_00214942 TCONS_00214943 r 3' 101737 EMBV3_08054 TTCGTGTCCCTACAGTCCCTCTTTCTTCCAGGTGATGGCAGCAGAGGACAAGGAGTCCCA Gene BVT0102_103853 - 0 NULL GK000019.2:36959646-37020549 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09404 TGTAAACTGAAGCCAAGTCTCTTAAAGTAGTGCTCAACCCTTAGCAGTGTGCAGGAGGGC Gene BVT0102_173878 + 0 NULL GK000028.2:15474741-15505052 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36054 GCTTGAACAGAGTGATTAGGAGTTCAGGACTGCATCAGCCACATAACCAAGGCTGGAGCT Gene BVV0101_025278 - 1 EMBV3_39053 GK000008.2:79504471-80053310 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22643 AAATCAAGAAAGAGCAGCTTATGAGCAAGGTCGTGGAAAACCCGAAGGACACCAGCTCCC Gene GeneID:508928|MRPS15:XM_002686472:524_cdna Constitutive 0 NULL GeneID:508928 3 GENE MRPS15 NULL mitochondrial ribosomal protein S15 EMBV3_06027 GCACTGTTCACAATAGCCAGGTGATGGAAGCAACATAAATGTCCACCAGCAAATGAATGG Gene BVV0102_399425 + 1 EMBV3_10799 GK000006.2:107493241-107505446 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25976 AGAGCTCAGCACCTGTAAGCTGGATAACCTCCTAGACTTTGGACCATCAAGCTCTGTTTG Gene BVT0101_015922 + 1 EMBV3_00735 GK000004.2:107397165-107447956 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185257 TCONS_00185258 1 XLOC_111537 NonCoding TCONS_00185258 XLOC_111537 NonCoding NonCoding - 4:107437707-107448597 - TSS137766 2653 1 TCONS_00185258_1 131 0.641914813418771 6 0.756910643768941 0 0 0 0 0 0 0 0 0 1.91276743930269e-25 3.59870117284819e-06 0 0 0 0 0.000387503779747051 0.000518951431518845 0.000275224562000931 0 0 0 0.000237104514242225 0.000283416559750697 0.000278036743306819 2.61155538322032e-06 0 0 3.55502454656958e-05 0.000111957420882231 1.61785646803897e-05 XR_234435.1 LOC101905834 PREDICTED: Bos taurus uncharacterized LOC101905834 (LOC101905834), 0.0 2985 100.00 0.623445156426687 NM_176882.1 TAS2R40 Homo sapiens taste receptor, type 2, member 40 (TAS2R40), mRNA. 2e-66 259 82.94 0.0938560120618168 0 noncoding 0 0 0 0 -0.0314015084212732 0.813657339250263 0.0141872687371359 0.765832365569868 GGGTGGCCACCAGCATAGACATGATCAGAGGGATGAAGATCCCCAGAGAAGGGAAAGCTGGAGCAAAAGGAGAAGAACAAGGACAGCCTCACAAGCCCAGGCATCAGCCACATGACCTTCCTTTTCATCACGGAGAACCACGGATGACCCAGAACAGCAGACTGTACGTGTTTTCCAGCATCATCCAAATCTGTAGCAAGAGCCTGGAAAAGCTCAGCATGAGCAGAATGCAGTCCAATGGGGAGTCTTTTGCCTCTGACCCACTCGGCTCCATGGATGACGGTGATGAGGCCATTCCCAGCAATGCCAATGAGGCACTCTATTGCAGAGACCACCAAGGTGAAGACGATCTTAAACCTGGTCGTGTCTTTATCCATTGCATCTGTGTTCACCGTCACCATTCTCTTTGGCTCTGATGTTCAGATTTCTGCCTGAAGAACTGGTACCTTCTCTGCAACTGTCTGATCCTGACTCAGTGGTCCTCACATGGGAGAGAAGGGACTGGGGATGTCTCACTATTCTCCTGGTGGCGTGCCTAGACCTAGGTGGAGGGTTGCTGTTGTGATCGTGGCTGGTTACAGTAGGGCTGGTGTTTCCACCTTTTGGTCAACTTTTCAGCTGTAACGAAAAGAAAACCAGCCTAGATGTCCCATGAAATGAACCACTGTAAGAACGAAGACCAGGGATGTGGAAGAGATGTGATCAAAACCTAATGGGCTTCTGAGAGAACTGAAATGTCAACAAGGCTTGTTCTGGTTGTTCATAAAATAAGCAGTTATGTATTTAAGTGAAAAATCTGCTTGGGACATCACATTCAGCAAGTTGTAAAAGAGTGTCTTTTGAATATAGCGGAAATTGAGTCCTGAAAAGATAGAAGCACGTGCAAATGTGACTGGAAATACTATTGCTCAAGGTCCTGAAAATATGGCTAGGAGATGAAAAGATAAATTGTGTGAAAAGTTAGTAAATGTTGTGACATTTGCTATTGCAGCTAAGAGTAGATATTTAGTAGTACTAAGATGTAATAATTAGTTTTGTTTATTCACTGTGGGTTTGAGAATTTTTATGATTGAAAATATTTTGGACAGTGTGCCCACGACAGGCACAATACGGGGAAGCAATTAAGAATTCATTTTTGTAATAGATGGAACTTTCAAACAATTTAATGTTGATGATGTTTCTGGGATAGAAGATGATGCTAATGTTGGACTTGCCCTTAAAGGTAAGTTTCATGTTGCAAGTTATCTAAGGACACAGTCATTACACCTACTCATTTGCCTTATTCAGCAGGAATTGGTCTCTGCTAGAAGTTAAAAATGGAACACATCACAGACACAGAGCTCAGCACCTGTAAGCTGGATAACCTCCTAGACTTTGGACCATCAAGCTCTGTTTGATGAGTTGGACACAGCATGGCAGTCTGCTCCCTGCAGGTAGATGGAGAGGCTAAGTCATAGCTGAAGCTAAGGAGAAATGGTGAACTGTTGAAACGAACTCACATCATCTGAGGGAAAAAATATCTTTGCTTATGTTAAGCAGCAAAGATTGTTACCACATAACTGGCCTTTTGGGTTAACAAATGCTTTGAATATTTCCCTGCAAAACCATCCACAGTAGTTATAAAACATGGAGACAATTATCTGGCATAGTGTTATCTGGTCCTCTTTTCTGTGCTAGAGTTAGTTGGTGGAACTATAATTGATGGCCTGAATTCCGTGATGGATACACTGACCACTGGTGTGGCTTATTGATCTCAATTCTGAAGACAGTCTCCCACCGTTCTGTGCCTTTTTGTCAGTCCCTGCCTGTAACGTGGAAGGTGACCCGTGGTGCACACAGGATGGGAAATGTAATACAGTGACACCGGAAAGTCAGATTCTCGCAAACATCCTAGCAATTGTGCAAAGGTTTTTTTTTTAAACTCTTTGAAAATGCCTATGGTTTTCAATAGCTCCTTTCCAATATTAAATATCCCTTCTTATCTAGACTATCTGTCAAGGTTGAATTCTGTGTTCATATCAGACTTGAAACAAGATTTACAGTGACATATTGGTGCCAAAGAAAAAGTTGCAGATTTCTGGTTCCAAAATAAAAGTCAATGAATTGTGAAATAAAATATTAGAAGTAGAATATTCCTATTTTTATCTTAACTTTTTTTTTTTCCAATTTTGAATTTGAGATACAGATGTTAATATCATACACACATGTATTATGTGGCTTGGTTGCAATCATAGTTCAGAAAAATAGTTTGATCATTTCCTGGCAGTTGGCTTATTTTACTTACCAGCGACATAGACCTTTATGTTCTTGGCTTTTGTAGACTGCAGTTTTCAATGATTTTTTTCAACTTATGTCCTTGTGTGGGCAATGAATTTTTTAGTGGCTCTAAAGCTTAGCTAACATTTTTCACCATAAGATGGAGCCTATGAATCCTTCTTGGAAAATCAAGCAATTACTTAATTCTTCCACTAGTGGGAGGACGTGCTCTTTCTAAGTAGGAGCCTCAGGAAGGTATTAAAAACCTTTTCTATATATTTTAGGTGGTTGACTAAGAGTTTTACCTACTCACTTTTAGGGAAAGTTTCTGAACCTTTTTATTCATGGTCAGAAGTAAAGCTTTTTTGAGAAAATTCATATCCGTCTCTTAAAAATG TCONS_00182746 r 5' 28406 TCONS_00182746 r 5' 19551 EMBV3_11237 GAGATGTGCATTTTTCAGGACAGAAGATGGGTCAACAGCAAAGTGTGAGGACCAGCCACG Gene GeneID:618809|VAT1L:NM_001046624:71_cdna Constitutive 0 NULL GeneID:618809 18 GENE VAT1L MGC137584 vesicle amine transport protein 1 homolog (T. californica)-like EMBV3_29834 TCCCTTTCATGCCACTGCTTTTTGGAAGAAAGTGGGGGTGGCAGAGATGTGGTGGGGAAA Gene GeneID:540401|PYGO2:NM_001102242:201_cdna UTR3_Alt 1 NULL GeneID:540401 3 GENE PYGO2 MGC159447 pygopus homolog 2 (Drosophila) EMBV3_19604 TGGGCTGGGTGGAAATGACCGACTTAAAAGTCAGTGTCGGCCCTGGTGGACAAGTTTAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35213 CTCTTTTCCCCTCTGCACGCACTTAACTTTGGCATTGGCGGTGACAGCACACAGCATGTG Gene GeneID:282515|PAFAH1B3:NM_174665:59_cdna Constitutive 1 NULL GeneID:282515 18 GENE PAFAH1B3 MGC142417 platelet-activating factor acetylhydrolase, isoform Ib, subunit 3 (29kDa) EMBV3_01814 ACTCAGTCAGATAATCATCGGCTTCTTTGGCTGTCTGTGTGGAGGAGTCTCTAAGCGAAG Gene GeneID:767902|TM4SF20:NM_001076981:199_cdna Constitutive 0 NULL GeneID:767902 2 GENE TM4SF20 MGC127084 transmembrane 4 L six family member 20 EMBV3_31739 CTTCGTCAAGATGAAGTCGGCGCTCATCATCGAACAGCGCGAGCTGGAAGACAAAATACA Gene GeneID:616260|LOC616260:XM_002700458:3_cdna Constitutive 0 NULL GeneID:616260 X GENE LOC616260 NULL similar to Protein Shroom2 (Apical-like protein) (Protein APXL) EMBV3_25613 CCCCATCGTGAAAGTCTGCTCCTTTGGCCTGTTGAATTTGACAGGTGTTACCCAAGGTCT Gene GeneID:510872|NCBP2:NM_001034396:72_cdna Constitutive 0 NULL GeneID:510872 1 GENE NCBP2 MGC128558 nuclear cap binding protein subunit 2, 20kDa EMBV3_06092 AGTTATGCTTGGGTTTAGTGTCCCTTGCTTGGGGCTGTGGGGTGGCCAACTCTTTGATCA Gene GeneID:526765|LOC526765:XM_002689083:8_cdna Constitutive 0 NULL GeneID:526765 7 GENE LOC526765 NULL similar to olfactory receptor, family 2, subfamily W, member 3 EMBV3_43250 TGCTCTGGAACAAGAGAAGCCCTGGCAGTGAGAAGAGCCCGCACGGCAACTAGAGAGTAA Gene BVV0102_016066 + 0 NULL GK000016.2:46125721-46201191 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04712 AATCAAGTTCCCTTTCCAGCCCCACGTTGTTCCCGAGTTGAATAGAAACCGTGTCCGGCT Gene BVV0102_333412 + 0 NULL GK000020.2:51817968-52768972 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114034 TCONS_00114036 TCONS_00114037 TCONS_00114035 1 XLOC_069167 NonCoding TCONS_00114037 XLOC_069167 NonCoding NonCoding - 20:52718548-52728542 - TSS85132 626 1 TCONS_00114037_1 34 0.190095846645367 3 0.937656359451616 0.00119540076446634 0.000619276215686276 0.0012197118085004 0.000517086368787719 0.000453377435638198 0.000239854743796945 1.44261993987277e-17 5.93363602324471e-06 9.47694515459168e-06 0 2.95084907615689e-06 0 0 0 0 0 0 0 1.70449227873077e-10 0.000174954332122776 4.37415665689705e-06 0 0 0 7.72530269593787e-06 0.000552470582916788 5.29575674205371e-95 1.36412820688547e-05 0 0 XR_230518.1 LOC784007 PREDICTED: Bos taurus T-lymphocyte surface antigen Ly-9-like (LOC784007), transcript variant X3, misc_RNA. 6e-27 125 82.68 0.193290734824281 XM_005248228.1 CDH18 PREDICTED: Homo sapiens cadherin 18, type 2 (CDH18), transcript 3e-37 159 82.21 0.257188498402556 0 noncoding 1 0 0 0 -0.63250788065736 0.0409237560080909 -0.0529975483923513 0.362276460397489 TCATAGGAAGCTTGCTCTGAGCCTCTGCTCTCTCTAGCCCTATCTCTAACGGGAGATGAAATAATGAAAAAATATTTGGCTAAACTGCTGGCAAAACTCTTCCTGTTTGTACCACACTTGGAAACAGACTCTTGGGACTAGCAGTGGAATCCTTCCTATTGATTGGCTGGTTAAATAGAGGACTATTAGCTTCAGACAGGCTAGATTGATTATACAGCAGCAGCGAGAGCGGAGACTCGGAGCTAAAGGATGTCAGCTCCGAGCCCCTGAAAGAAATCACAGACTTCACCTTGGAATAGTTCATCCACTCCTGCTTCATTAACGAGGATTTTGAAAAGAAAACCCCAATCAAGTTCCCTTTCCAGCCCCACGTTGTTCCCGAGTTGAATAGAAACCGTGTCCGGCTCCTGTGCAGTTTCATAGAACTGATTAATGCCTGTGAGTTGAAGGAATACACCACCAGTTCAATGCACTTGAACTTGGGCAAACTCCAGGAAATTGTGGCAGACAAGGAAGACTGGCATGCTATAGTCCGTGGGGTTGCAAAGAGTCAGACACGACTTGGCGACTGAACATCACAACAAAAAGCAAAACGTTAATTCTTATAAATAAACTTTGCAAATAAT TCONS_00114040 TCONS_00114041 s 5' 681334 TCONS_00114040 TCONS_00114041 s 5' 691327 EMBV3_30862 GCAAAGTCAAATCTGGTCTTGTTAACTGAGTAATACTTCTGCCTTACCTAGGAATAATCC Gene GeneID:515499|PCNA:NM_001034494:35_cdna Constitutive 3 NULL GeneID:515499 13 GENE PCNA MGC128125 proliferating cell nuclear antigen EMBV3_29432 GCTGAAGGTGTGTTTATTTTAGTTGGGCCTCTTGCCCTGATGCTGGTCTCCTATGTGCAC Gene GeneID:514662|LOC514662:XM_002687031:108_cdna Constitutive 0 NULL GeneID:514662 4 GENE LOC514662 NULL similar to olfactory receptor OR7-15 EMBV3_03250 AGCTTTGATAGTACACGTCTCCTCAGACAATTCATTTCCAAGTGCCAGACAAGAGCCCGC Gene BVT0102_078960 + 0 NULL GK000022.2:61380888-61401188 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42153 GTCAGATTGATGTGCACATTTTCAACGCAGATACTCACAAGTGGTCAACACCCCGAGTGT Variant GeneID:541138|KLHDC3:NM_001014966:347_cdna 224^400 2 EMBV3_26889 GeneID:541138 23 GENE KLHDC3 NULL kelch domain containing 3 EMBV3_33161 GCCTTGCCCCCTCACAGCAGCCTCTGCTGCCACCTACACCCTCCACATCTTCTCTAAGCT Variant GeneID:513874|SPDYC:XM_002699389:378_cdna 631^767 1 EMBV3_34287 GeneID:513874 29 GENE SPDYC NULL speedy homolog C (Xenopus laevis) EMBV3_12678 CCATCATGAAGAAAGGGACCCGTGTGAAAGGTATTTAACGCCACAGGCGAGCTGTCGAAC Variant GeneID:507461|SIAE:NM_001045968:11_cdna 289^464 1 EMBV3_02104 GeneID:507461 29 GENE SIAE MGC137441 sialic acid acetylesterase EMBV3_29795 CGCGGGCAGGGCGCCAAGGCGGCAGGAGGAAGAAGAGAAAGGATGCACATCACAGGAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43530 GCTCTGAAGGCCAAGGGGATCCAGGTGGTGGCATGTCTGACCGTTAATGATGTCTTTGTA Gene GeneID:282885|PRDX5:NM_174749:476_cdna Constitutive 1 NULL GeneID:282885 29 GENE PRDX5 Prx_V peroxiredoxin 5 EMBV3_06336 CCTTGCCAGGGGATTAACATTTGAGAATGAGGAAAACAGATCAAAAGGACCTGTGGGGCC Gene BVT0102_124255 + 0 NULL GK000030.2:26733725-27624241 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08116 CTGTTCTCAGCACTGTATTGGTCAAGATACCCAAGCAGTTTGTACAGTTTCTGTCACTAG Gene BVT0102_096165 - 0 NULL GK000003.2:29509177-29512757 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172748 TCONS_00172753 TCONS_00172755 TCONS_00172751 TCONS_00172749 TCONS_00172752 TCONS_00172750 TCONS_00172754 1 XLOC_104205 Coding TCONS_00172748 XLOC_104205 Coding Coding HIPK1 3:29510234-29563150 = TSS128585 6704 1 TCONS_00172748_5 1210 16 0.873608617594255 0.00122670719573411 0.000609574997630379 0.000599202844888324 0.000246430962100265 7.0665961670266e-10 0.000372164237755299 1.68180288650886e-17 2.95645418372363e-05 0.000902407158767237 0.000717780925896907 0 6.65964243212346e-16 0.000363148935649295 1.10596344050169e-15 4.3886871690243e-10 0.00635999458195672 0.00128093651594903 2.29071376210427e-15 0.000546722948325092 0.00061688989852398 2.85533377593278e-19 2.95600242052264e-38 0.00140075378179299 7.19827840795448e-06 0.00125660757191681 0.000160553700297158 2.13006700172011e-13 0.000612900261093918 0.000165522993016364 1.64547823602055e-09 NM_001109998.1 HIPK1 Bos taurus homeodomain interacting protein kinase 1 (HIPK1), mRNA. 0.0 7541 100.00 0.623508353221957 XM_005270612.1 HIPK1 PREDICTED: Homo sapiens homeodomain interacting protein kinase 1 (HIPK1), transcript variant X4, mRNA. 0.0 9339 90.87 0.999254176610978 TCONS_00172748_5 sp|Q86Z02|HIPK1_HUMAN HIPK1_HUMAN Homeodomain-interacting protein kinase 1; 0.0 2451 98.51 0.999173553719008 2 coding 0 0 0 0 -0.0196210660159735 0.915475208623417 -0.00396836067919499 0.931496588283917 CCGGGGCCCGGGCCGGCTCGCGCAGGGGGTATGATGACCCGGCGGCGGGGCCCCGGATCTCGTCTCCTCCGCCGCCTCCTCACGGCAGCCCCAGCTCGCGGCTGAGAACCAGAAGACACACCGGCGGTATGGCATCACAGCTGCAGGTGTTTTCCCCCCCATCAGTGTCGTCGAGTGCCTTCTGCAGTGCGAAGAAGCTGAAAATAGAGCCCTCTGGCTGGGATGTTTCTGGACAGAGCAGCAACGACAAATATTATACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGGTAGCAAATTTCAACATCCCTGCTTACGACCAGGGCCTGCTCCTCCCAGCTCCTGCAGTGGAGCACATTGTTGTAACAGCTGCTGATAGCTCGGCCAGTGCTGCTACATCAACCTTCCAAAGCAGCCAGACCCTGACTCACAGAAGCAACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGATTGAAAAGAAAAAGTGAGGAAGTTGACAGCAACGGTAGCGTGCAAATCATAGAAGAACATCCCCCTCTCATGCTGCAAAACAGGACTGTGGTGGGTGCTGCTGCCACGACCACCACTGTCACCACAAAGAGTAGCAGCTCCAGCGGAGAAGGGGATTACCAGCTGGTCCAGCATGAGATCCTTTGCTCTATGACAAACAGCTATGAAGTCTTGGAGTTCCTAGGCCGGGGAACATTTGGACAGGTGGCTAAGTGCTGGAAGCGGAGCACCAAGGAAATTGTGGCTATTAAAATCTTGAAGAACCACCCCTCCTATGCCAGACAGGGACAGATTGAAGTGAGCATCCTTTCCCGCCTAAGCAGTGAAAATGCTGATGAGTATAATTTTGTCCGTTCTTATGAGTGCTTTCAGCATAAGAATCATACCTGCCTTGTGTTCGAGATGCTGGAACAGAACTTATATGATTTTCTAAAGCAGAACAAGTTTAGTCCACTGCCACTCAAGTACATCAGGCCAATCTTGCAGCAGGTGGCCACTGCCCTGATGAAGCTCAAGAGCCTTGGTCTAATTCATGCTGACCTTAAGCCTGAAAACATAATGCTGGTTGATCCAGTGCGCCAGCCCTACCGAGTGAAGGTCATTGACTTTGGTTCTGCTAGTCACGTTTCCAAAGCTGTGTGCTCAACCTACTTACAGTCGCGTTACTACAGAGCCCCTGAAATTATTCTTGGCTTACCATTTTGTGAAGCTATTGATATGTGGTCATTGGGCTGTGTGATAGCAGAGCTGTTCCTGGGATGGCCTCTTTATCCTGGTGCTTCAGAATATGATCAGATTCGTTACATCTCACAAACACAAGGCCTGCCAGCTGAATATCTTCTCAGTGCCGGGACAAAAACTACTAGGTTTTTCAACAGAGATCCTAATCTGGGGTACCCGCTATGGAGACTTAAGACACCTGAAGAACATGAATTGGAAACTGGGATCAAGTCAAAAGAAGCTCGAAAGTACATTTTTAATTGTTTAGATGATATGGCTCAGGTGAACATGTCTACAGACTTAGAGGGAACAGATATGTTGGCAGAGAAGGCGGATCGAAGAGAATACATTGATCTGTTAAAAAAAATGCTAACAATTGATGCAGATAAGAGAATTACTCCTCTGAAAACTCTTAACCACCAGTTTGTGACAATGACTCACCTTCTGGATTTTCCACATAGCAATCATGTTAAGTCTTGTTTCCAGAACATGGAGATCTGCAAACGGAGGGTCCACATGTATGATACAGTGAGTCAGATCAAGAGTCCCTTCACCACACATGTTGCCCCAAATACAAGCACAAATCTAACTATGAGCTTCAGCAACCAACTCAATACAGTGCACAATCAGGCCAGTGTTCTAGCTTCCAGTTCTACTGCAGCAGCTGCTACTCTTTCTCTGGCTAATTCCGACGTCTCCCTGCTAAACTACCAGTCAGCTTTGTACCCATCATCTGCAGCACCCGTTCCTGGTGTCGCCCAGCAAGGTGTTTCCTTGCAGCCTGGAACTACCCAGATTTGCACTCAGACAGATCCATTCCAGCAAACATTTATAGTATGTCCACCTGCTTTTCAAACTGGACTACAAGCAACAACAAAACACTCTGGATTCCCTGTGAGGATGGATAATGCAGTGCCAATTGTCCCCCAGGCACCAGCTGCTCAGCCACTGCAGATACAGTCAGGGGTCCTCACGCAGGGAAGCTGTACACCACTAATGGTAGCAACTCTTCACCCTCAAGTAGCCACCATCACACCGCAGTATGCGGTGCCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCGCTGGTTGAACAGACTGCCGCTGTACTGCAGGCTTGGCCTGGAGGAACCCAACAAATTCTCCTGCCTTCCACTTGGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGCCCACTGCAGTGATCCCAGAGGCCATGGGCAGCGGCCAGCAGCTCACAGACTGGAGGAATGCCCACTCTCATGGCAACCAGTACAGCACTATCATGCAGCAGCCATCCTTGCTGACGAACCACGTGACATTGGCCACTGCTCAGCCCCTTAATGTTGGCGTTGCCCATGTTGTCAGACAACAACAATCCAGTTCCCTTCCTTCAAAGAAGAATAAACAGTCTGCTCCAGTCTCTTCTAAGTCCTCTCTGGATGTTCTGCCGTCTCAAGTCTACTCTCTGGTTGGGAGCAGCCCCCTCCGTACTACATCTTCTTATAATTCCCTAGTTCCTGTTCAGGATCAGCATCAGCCAATCATCATTCCAGATACTCCCAGCCCTGCTGTGAGTGTCATCACCATCCGCAGCGACACTGATGAGGAAGAGGACAACAAATACAAACCCAATAGCTCTGGCCTGAAGGCAAGGTCTAATGTCATCAGTTACGTCACTGTCAATGATTCTCCAGACTCTGACTCTTCCTTGAGCAGTCCGTACTCCACTGAGACCCTGAGTGCTCTCCGGGGCAATAGTGGGTCCCTTCCAGAGGGGCCTGGCAGAGTCGTGGGAGATGGCCCTGGCACCCGCACCATCATTGTACCTCCACTGAAAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCTGAGCAGTAAGACCAAGCCAGTGGCTTCAGTGAGTGGGCAGTCATCTGGATGCTGTATCACCCCCACAGGGTACCGAGCTCAACGCGGGGGGACCAGTGCAGCGCAGCCACTCAACCTTAGCCAGAACCAGCAGTCATCATCAGCTCCAACCTCGCAGGAGAGAAGCAGCAACCCTGCCCCCCGCAGGCAGCAGGCATTTGTGGCCCCGCTCTCCCAAGCCCCCTACGCCTTCCAGCATGGCAGCCCACTACACTCGACGGGGCACCCCCACCTGGCCCCAGCCCCTGCTCACCTGCCGAGCCAGCCTCATCTGTATACGTATGCTGCCCCCACCTCTGCGGCTGCATTGGGCCCCACCACCTCCATTGCTCATCTCTTCTCCCCCCAGGGCTCCTCAAGGCACGCTGCAGCCTATGCCACCCATCCGAGCACTCTGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGTCTCCTCACTTCTGCCAGCGTGGCCCCTGCTCAGTACCAACACCAGTTTGCCACCCAGTCTTACATTGGGTCTTCCCGAGGCTCGACCATTTACACTGGATACCCACTGAGTCCTACCAAGATCAGCCAGTATTCTTACTTGTAGTTGGTGAGCATAAGGGAGGGGAGGGGGCAGAGTTCTTAATGGGCTGTCATGAGCCCCTCCCTTACCCTCTCCTGAAACTCCTTAGCCAGCAATTTGCTCCACAGGGGCCCACTGAAGCAGAAGGCTTTTCTCTGGGGAACCTGTCTCAGTATTGACTGCATTGTTGTAGTCTCCCAAAGTCTGCCCTGTTTTTTAATTCTTTATTTTTGTGACAGCATTTTTGGTATTTGGAAGAGTTCAGATGCCCATCGTCTGCAGTTACCAAGGAAGAGAGATCATTCTGAAGTTACCTTTGAAAAATATTTTCCCTCTCTGACTTGATTTCTATAAATGCTTTTAAAAACAAGTGAAGTATCTTTTTATTTAACTTTATTTTATTGTAATTCCTGGTCAGAGGAAAAACGGTGATAGGAGGACTTGGTAACAAGTAAGGAAAGGAAAACCATTACTTTCTGCTTGTTTAAAAACCAAGACTTAATTGCTTCTCTTAAGAGCAGCTTGCACAAGTCTGTATTTTACTGTCTCGCATTTCTCAGAATTTTACCTTTGCTAATGGGACATTTAAGCTTACGGTGTTTTAGTTTTGTTTCATGTCATGTTATATTTAGTGGGAAATTTTTATTTTTGCAAAACTGGTTACATACTACTCTGTGTTACTATTGGGATTCTCTCAGTTGCTCCTGTGTTTATTATAAAGTAGTGTTAAAAAGGCAGCTCACCATTTGCTGGTAACTTAGTGTGAGAGAATCCATACCTACCATGAAAGCACCGGGTGTTCTTTTTAAATGAAGCCCTGTGCATTCTTTTTAAATTATTTAAAAAAAAGTCTTTCTCTGATTCAGCTTCAATTTTATTCTTGGAAAAGCCATTAAGGTGGTTATTATTGTATGGTGGTGGTGGTTTTATTATATGCAAGCTCTCTTTGTATTATGTGATACTGGCATTGATGAGCTTTGCCTGAAGATTAGTATGAATTTTCAATAATACACCTCTTTCTCTCTTTGCCTCATCTCTCCCTTTGTTCTATGTGATTTATTTGGGGAGAAAGCTAAAGGATCTGAAATCAGATAAGAACGTTGTGTATAGCTTTTATACTTAAAAGTAGCTTTCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTTACTAAGACTTATATAATAAGTGCATGTAGGAATTGCAAAAAATATTTTAAAAATTTATTACTGAATTTAAAAATATTTTAGAAGTTTTGTAATGGTGGTGTTTTAATATTTTGCATAATTAAATATGTACATACTGATTAGAAGACTATAACAAGCAATTTTTCCTGCTAACCCAAAATGTTATTTGTAATCAAATGTGTAGTGATTACACTTGAATTGTGTATTTAGTGTGTATCTGATCCTCCAGTGTTACCCCGGAGATAAAATTGATGTCTCCATTGTATTTAAACCAAATGAACTGATACTTGTTGGAATGTATGTGAACTAATTGCGATTATAATAGAGCATATTACTGTAGTGCTGAGTGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTGTTCAGTGTGTGTCTCTTCCTTCCCTTTCTCCTCCTTCCCTTATTGTAGTGCCTTATATGATAATGTAGTGGTTCATAGAGTTTACAGTGAGCTTGCCTTAGGACGGACCAGCAAGCCCCCGTGGACCCAAAGCTGTTCACCGGGATTTATCAGAACAGGATTAGTAGCTGTGTTGTGTATATGCATTATTCTCAGTTTCCCTGCCGACATTGGACAACAAAAACAGTAGCTTCTCTCTTTTACCACCACCTCTACCCCTTTCTGTTTTGGATTCTCAGCTGTGTTCTCACAGAAGCATTTTCCCTATGTGGCTCTCTCACTGTGCATTGCTACCTTGCTTCTGTGAGAATTTAGGAAGCAGGTGAGAGGAGTCAAGTCAATATTAAATATGCATCCCCCCCCCATTTTTTTAAGTATGTGCAATCACTTTTAGATGATTGATTTTTTCCTTTTCCCATGTGGCAGTCCTTCCTGCGAATAGTCAACATTCCTAGTAAAATATTTGCTTGTTGAAAAAAACATGTAACAGATGTGTTTATACCAAAGAGCCTGTTGTATTGCTTACCATGTCCCCAATACTATGAGGAGGAGTTTTGTGATGCCGCTGGTGACAGGGAACTCACAGAAAGGCTTCTTAACCGGTGAAGAATATTAAGAAGGAACCAAAGCCTGTTGAGTCATTGGACTTCTGAGGTTTCTTTTTAACAACTTCTGTATTCTTGGGGCCCTTCAAACTGTGAAATTGTCCTTGTACTCTCAGCTCCTGCACGGATCTGGGTCAAGAAGAGGGTACTGGGGATGGCAAAGTTCCTGCCCGTAAAGATTTGAGGGAAGAAGGTTAACCCTAAGACGTGGATGTGTTCCATCTGAACTGAAGGTTATAGATTTGAGGGATATGTCTAGGACTGGTTCTTTGTAGAGATGGTGTCAAGGAGGTGCAGGATGGAGATGGGAGACTTCATGGGACCTGGTCAGCAAGCTCTGTACCAGGTTGAACACCGAGGAGCTGTCAAGGTATTTGGAATTTCTTCATTGGAAGGAGGAAGGGCTTTCAGGATGGGGCAGATAGTCAGAACAGCCTACCAGGAACATGATGTTTTTCTACTTTCTTTTCATCATTATATTGAGTTCTGTTCTCAGCACTGTATTGGTCAAGATACCCAAGCAGTTTGTACAGTTTCTGTCACTAGTATTATACAGTTTTTTGTGTCAGCGTGGGTGATCTTTGTGTAAAACTCTTTTTGCCAAACATTCTCATTTTCTTTCTCAAAGGCAGATCTATGGAAACTTTTTTTGTTCCTTATCTTTCCTCTACAAGGGATAAGATTTGTTGTTTTTGTAAGAAATGAGATGCAGGGGNN EMBV3_01956 CTGAATTAGGCCATTTTCCCCCAACCCCTCAATACCCTACAGATCCTGCCTCCACCCAAT Gene GeneID:100124501|FGD1:NM_001102544:2_cdna Constitutive 0 NULL GeneID:100124501 X GENE FGD1 MGC151813 FYVE, RhoGEF and PH domain containing 1 EMBV3_11139 AATATTTATGGGCCCAGGCATGTGGATGTGTCTGCTAATGTAAACTTTGTCATGGTTTCC Gene GeneID:614584|WT1:XM_002693516:255_cdna Constitutive 2 NULL GeneID:614584 15 GENE WT1 NULL Wilms tumor 1 EMBV3_04151 CCTCGTGGGTGGACCTTGGGTGATTGCCTTTTTGAACCCCCTCTTGCATACCCTTATGAT Gene GeneID:528914|LOC528914:XM_002697485:157_cdna Constitutive 0 NULL GeneID:528914 23 GENE LOC528914 NULL similar to Olfactory receptor 1F12 (Hs6M1-35P) EMBV3_23436 GTTATTTCTGGAGAAGCCCTGGGAATCAAGGGTGGACAAGCTTCATTTATACCATATCTG Variant GeneID:790878|PIR:NM_001102358:44_cdna 788^872 3 EMBV3_07873 GeneID:790878 X GENE PIR MGC160032 pirin (iron-binding nuclear protein) EMBV3_20852 TCCTCATGGGGGTTGTGATTCTCCTCATACCGGTTTCTCTAATCCTGGTGTCTTATGGCC Gene GeneID:504498|LOC504498:XM_002693141:45_cdna Constitutive 0 NULL GeneID:504498 15 GENE LOC504498 NULL similar to olfactory receptor MOR260-1 EMBV3_08215 TCTGAACATCGCGGCCGGCGTGTGGATGGTGATGGCGGTCGTTCCCATCGTCATCAGCCT Variant GeneID:512024|MGC139698:NM_001080263:73_cdna 222^347 1 EMBV3_33777 GeneID:512024 11 GENE MGC139698 NULL hypothetical LOC512024 EMBV3_15758 AGGCTCGGTCATGGGGATGATGGTGACACTGATAGTTTTCCACCTCACTTTCTGTAGGTC Gene GeneID:506323|LOC506323:XM_002688591:319_cdna Constitutive 0 NULL GeneID:506323 7 GENE LOC506323 NULL similar to Olfactory receptor 10H4 EMBV3_16983 GTGGGCGAAGACTTCCGGTGGTACTTGAAGAGATTTTGAGCAGCACCATCAAATCTTACA Variant GeneID:517857|C3H1orf123:NM_001038130:55_cdna 134^272 5 EMBV3_36102 GeneID:517857 3 GENE C3H1orf123 C1orf123 MGC133492 chromosome 1 open reading frame 123 ortholog EMBV3_40883 CCAGAGTAAGTGTGTTTAATTCTCTATGGATTCAGTGAAAGCTTAATGGTCAGAAATTGG Gene BVV0102_258378 + 0 NULL GK000001.2:126874542-126937743 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005117 TCONS_00005115 TCONS_00005114 TCONS_00005112 TCONS_00005118 TCONS_00005113 TCONS_00005111 TCONS_00005119 TCONS_00005109 TCONS_00005110 TCONS_00005116 1 XLOC_001187 Coding TCONS_00005110 XLOC_001187 Coding Coding U2SURP 1:126934525-126980650 j TSS2534 6893 1 TCONS_00005110_6 999 28 0.851162084814847 6.66591898314087e-27 1.62846716040853e-06 4.75037463749633e-11 1.6420749662733e-41 3.76233232334054e-11 1.37886020989452e-05 7.38295097198805e-10 4.24690427003656e-34 2.18163148430847e-12 3.19197251667366e-05 2.03029309021246e-05 1.59504521305899e-10 2.71147012546115e-21 3.2875189587283e-21 1.0882680223259e-13 0.00091685540345555 6.87007017765584e-16 0.00383719827937238 8.06673584206539e-20 4.58071939886868e-19 3.6021995761e-14 4.07076255417953e-07 0.000268651259250362 0.00181362927978396 3.32015466730366e-29 3.036660521696e-11 5.63938942764228e-20 1.31330479695137e-17 7.85075408546468e-05 9.85957482686112e-05 XM_871967.3 U2SURP PREDICTED: Bos taurus U2 snRNP-associated SURP domain containing (U2SURP), transcript variant X6, mRNA. 0.0 6222 100.00 0.500362686783694 NM_001080415.1 U2SURP Homo sapiens U2 snRNP-associated SURP domain containing (U2SURP), 0.0 7887 85.78 0.98694327578703 TCONS_00005110_6 sp|O15042|SR140_HUMAN SR140_HUMAN U2 snRNP-associated SURP motif-containing protein; 0.0 2033 99.50 0.998998998998999 4 coding 1 0 1 0 -0.0937665806891995 0.486178907531231 -0.0195111452979167 0.71084011265839 GTGCTGTTCTTAGTGCTTCACCTGTCTTTGTCCTTCCAACACCACAGTCAGCTTTATAGATGAAAGAACTGAGGTTACAAAGCTGCTGACCAGATCATCAGATGTTCATTCATCTGGATCTTCAGATGCCCATATGGATGCATCTGGACCCTCAGATAGTGATATGCCAAGTCGGACTCGACCTAAGAGCCCAAGAAAACATAATTATAGGAATGAGAGTGCCCGTGAAAATGTTTCTGATTCTCCTCATCAGAATCTCTCAAGGCCTCTTCTAGAAAACAAGCTTAAAGCATTCAGTATTGGAAAAATGAGTACAGCTAAGCGAACTTTGAGTAAGAAGGAGCAAGAAGAATTAAAGAAGAAGGAGGATGAAAAGGCAGCTGCTGAGATTTATGAGGAATTTCTTGCTGCTTTTGAAGGAAGTGATGGTAATAAAGTGAAAACGTTTGTGCGCGGAGGTGTTGTTAATGCAGCAAAAGAAGAACATGAAACAGATGAAAAAAGAGGTAAAATCTATAAGCCATCTTCAAGATTTGCAGATCAAAAAAATCCCCCAAATCAGTCATCCAACGAAAGACCACCATCTCTTCTTGTGATAGAAACCAAAAAACCTCCACTGAAGAAAGGGGAGAAAGAAAAGAAAAAAAGCAATTTGGAACTCTTCAAAGAAGAATTGAAACAAATTCAAGAAGAGCGTGACGAGAGACATAAAACAAAAGGCAGGTTAAGTCGATTTGAACCTCCACAGTCAGATTCTGATGGTCAGCGTCGTTCTATGGACGCGCCTTCAAGAAGAAATCGATCATCTGGTGTTCTTGATGATTATGCACCTGGCTCACATGATGTAGGCGATCCAAGCACTACTAATTTATACCTTGGAAACATTAATCCACAGATGAATGAAGAAATGTTGTGCCAAGAATTTGGAAGATTTGGCCCATTAGCCAGTGTGAAAATTATGTGGCCTAGAACTGATGAAGAAAGGGCAAGAGAGAGAAATTGTGGCTTTGTGGCCTTTATGAACAGAAGAGATGCTGAAAGAGCTTTAAAAAATTTAAATGGAAAGATGATTATGTCTTTTGAAATGAAGTTAGGTTGGGGTAAAGCTGTGCCTATTCCTCCACATCCAATATACATTCCGCCTTCCATGATGGAACATACGCTTCCCCCACCTCCATCAGGACTGCCTTTTAATGCGCAGCCTAGAGAGCGGTTAAAAAACCCCAATGCTCCCATGTTACCACCACCTAAAAACAAGGAGGATTTTGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAACAGAAAGGAATTTGCTCGCCCTGATACATCGAATGATAGAGTTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATGATTATGAACAGAGAGATCAACAATCCTATGTTCAGATTCTTATTTGAAAACCAGACACCAGCCCATGTTTACTATAGGTGGAAGCTTTATTCTATTCTCCAGGGAGATTCACCAACTAAGTGGCGGACGGAAGATTTTCGTATGTTCAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCATATCTGCATGGGATGTCAGAAGAGCAGGAAACAGAAGCTTTTGTAGAGGAGCCAAGTAAAAAGGGAGCACTTAAGGAAGAACAGAGAGACAAATTAGAAGAAATTCTGCGGGGGTTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGTTTTCTGTCTTAATAATGCTGAAGCTGCTGAAGAAATCGTGGATTGCATTACTGAGTCCTTGTCCATCTTAAAGACACCCCTTCCCAAAAAGATTGCCAGATTATATTTGGTTTCTGATGTTTTATACAACTCTTCAGCCAAAGTTGCCAATGCTTCCTATTATAGAAAATTTTTTGAAACAAAGTTGTGTCAGATATTTTCAGACCTCAATGCTACCTATCGTACAATTCAAGGCCATTTACAGTCTGAAAACTTTAAGCAACGGGTAATGACCTGCTTTAGAGCATGGGAAGATTGGGCAATTTATCCAGAACCATTTTTGATCAAACTACAAAATATTTTCTTAGGACTTGTAAATATTATTGAAGAAAAGGAAGCAGAGGATGTACCAGATGACCTTGATGGTGCCCCCATTGAGGAAGAGCTGGATGGTGCCCCTCTAGAAGATGTGGATGGAATTCCTATTGATGCTACTCCTATTGATGACCTTGATGGAGTCCCTATAAAGAGCCTTGATGATGATCTTGATGGAGTGCCTTTGGATGCAACTGAAGATTCAAAGAAGAATGAGCCTATATTTAAAGTTGCCCCATCAAAATGGGAAGCTGTAGATGAATCTGAATTGGAAGCACAGGCTGTAACAACTTCTAAATGGGAGTTATTTGACCAGCATGAAGAATCAGAAGAAGAAGAAAATCAAAATCAAGAAGAAGAAAGTGAAGATGAAGAAGATACTCAGAGTTCCAAATCTGAAGAACATCATTTGTACTCTAATCCAATCAAAGAAGAAATGACTGAGTCCAAGTTCTCTAAGTACTCTGAAATGAGTGAGGAAAAACGAGCTAAACTCCGTGAAATCGAGCTCAAAGTTATGAAGTTTCAAGATGAATTGGAATCTGGAAAAAGACCTAAAAAAGCAGGCCAGAGCTTTCAGGAACAAGTAGAACACTACAGGGATAAACTTCTTCAGCGAGAGAAAGAGAAGGAATTAGAAAGAGAGCGAGAAAGAGATAAGAAGGATAAAGAAAAACTGGAATCTCGATCCAAAGACAAGAAGGAGAAAGATGAATGTACTCCAACAAGGAAAGAAAGGAAAAGGCGACACAGTACGTCCCCTAGCCCATCTCGCAGTAGCAGTGGTAGACGAGTGAAATCCCCATCACCAAAATCGGAGCGATCAGAGCGTTCAGAAAGATCTCATAAAGAGAGCTCACGGTCCAGGTCATCTCACAAAGATTCTCCTAGAGATGTTAGCAAAAAGGCCAAAAGATCTCCATCTGGTTCAAGGACACCTAAAAGATCTAGGCGATCACGGTCTAGATCCCCTAAAAAATCAGGGAAGAAATCCAGATCCCAGTCCCGATCTCCACACAGGTCTCATAAAAAGTCAAAGAAAAACAAACACTGACATAAATTTTTAAGATGCTGTCACTTATTGGAAATGCGATTTTGTTTTGTGCCTGAATGGTCTGTTTTTTTAAAAAAACGAAAAACAAAAAATCTAATGAAAGAGCATTCCTGGGGTTTTTATTTGTTTGTGAATGCATGTGTAAACTCATAAGTAACTGCATCTGTAGACCTGTTGTTGTTTTATATTGTATAAATTACTTTTGTTGTGGCTGTTTCTCAAGATGAAATTTTTATTGTGCTAATGAATTTCATCAGAAATGTGTATAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGAAAAAATAATACAGATGTCTTCCCCCCTTTTGTAGCTTTGACAATTTGAATTAGATTTCAAATAAAATCTGAACAGAAAACTTAAATGTTGTTTTTTTGCCCTGTTGATGACATCAAGTCCCTTAAAATCCTGCTAAGTGAGTTTAGCACTTCCGTTGTGTTTCTTACACCTAATGCACTTTACAAGCTTCACTCTTCAAGTAGCTAAAGTTTTGTATTTGCTAAGATGACTGTCAAAATTGAGGGACCCAAGACTCATATTTGGTAGGCTTGCCAACCAATTTCTTGGGTAATGTTCCCTTAGGTAATACTAGTACCCAGAGATCAAGAGACTAGGCAGATATGCGTGGTCTTTTGTTAATGGTATGCCTGGCTAAAATCTCTTTTTTCAAAGAAGCAATATGATTTCAGTACACTTAACCCATGTCCTGAACAACTACTTATTGGGGAAAAATTAAACTTCCATCTTTTGATTTAATTTTCTATCATTAGAAAAATGTATTTAAAAGAATTTAACAGTAATTGGCCATAGAATTTTTTTTATGAAGGTTGCCCTTTTATAGCCCTCCGTAGTCTCTCTTTCAAACACTGGTATCAGAATATTTCTACAAGGTTCTGTTTAAAGCACCTTCATTGGTTTTTTGTTTTTAAAGGGTTTAGTTTTAGGTTTAGCTTTTAAGTAGAATTTTAAAATGATATAAATTTTTATGAAACATAACACCCAATGGTTTGTAAATTAAAGATGCAAAAAGTTGATTTAAACCATTTTCAGAGTTGAAATCTGTTGTACAGTGGGGATAAATTGCAGTGTGAGGAAGACATAAGAAAACTTATGTAATGTTGAACATAATATCGCTACAATGTAATAAAGGGTCATGTAGACTTGAACTGATGCTACTGTTTGTGAACCTTGCTTTCAGTTTTTCATTTAGACACTTTTTACAGTGATTTGATGGTTTTTTCCCTTCTTAATAGAGTAATGGTTCTAATAACAGATTGTTCTGAGTTAGCTTGTTTTTTAAAAGTATCTTTTCAAGTTGTACTTGGTCTTGCCTAGTCACAAAATTAAAAACCTGTACTCATGATTTGAAGGGTAGGAATATTACTGAGCATTGAGGCATGTTATTTCCAAACTGGGCAAACCTACAAAAGCTGTAGAAATGTGTCAGATTATTTTACTTAGTGGTTCTTAACAACATGCACTATTGCTTGAAAGTTATTTCCTTATCATTCACTCTTTTGTTTGTCCATATTGATAGGCATTTAGTTAATTACTAAATGTTACTTAGAATAATTAAACATGAACATTTGGTGCTGGTTTCTAAAAACCTACAAATACAGCCATTTTTAAAGAACCTGTTTTTCTCCCTTGTTCACTGCCTGGGAGAATGGAATTTTATATAATTACTGTTGCAGAAATAATAATAAGGTTGAGTTGCTGGTGATTGTGGGCATTCCATCATCATTGGTATCTAGTATAGGCTTAGAAATGATTAGTCAGGAAGTGATTTTGCCAGTCAAATTGCAAGTTATGCTTATTTTTCTGTCTCTTAAAAAAGTAGCCTGGAGAAGCAGGAGTGAGTAGACATTGTTAGGTCGGTTTTGAGTGCTTATTTGTATTTTTTTCTCTACTGCAGTAGAATTTAGCAATTCTTTTAATCTGCATCTAGATATGTAACAAACATCTTTATTTTATGCAGTGGGTAAGACTGACTTCCTTTTGGGTGATGGATGGGGATTCTGTAGGCTTGATAGAATATGTATTCTGTGAAGCTTGCTAGTGTTCATATTAGATTGTACTGAATTTTTTTTTTTTTCCTGGAATTGCAAGTGGTATTGTTAGATAATTTCCAGCTTTACTTAATGAGAAAATATCCAGAGTAAGTGTGTTTAATTCTCTATGGATTCAGTGAAAGCTTAATGGTCAGAAATTGGTGAATGGGACGGGGGGAGATATTCCACATATTTTTATAAAAGCATAGTATTCATTGCTTCTTGTATAAAGAACACTTAATTAGCAGAATTTCTGCAGGTTCATGAAAATGTTTGTAGGCATGGCTGTTCAGTTATAGGAAGTATCCTGTTCCAGTTCTATGACATGTCTATCCTCCCCAACAGCTACATGTAGGAGGAAATCCTCTGTTATCTACTCTTTATAAAGGGCGTGGCTTAAACTCTTCCGCTCCAACATAAACAGGTATTCCTTACTAGGTTAATACCATTTAATCGCTCTCTTTAATAGGTGAGAGAGAAAAAACGGTCCTTTATTTCTTATCAAAGAGAGGCCTAAGGTTGAAAAGAATCATGCCTATGAATCTTTTCTTTGATTTTGTATTTTCTTATTACTGTTAGTAGGTGTATAGGCACTTCTGAACTGTGACATGTTGAGAAGTTAGAGATGAAAGAACTAAAACAAAAAGCCCTGACCCAAAGGAATGCTTAGATTTGGCTCAAAGTGTTCTTGCCATTTCTGCTAAAGTGTGCAGAAATTACTGTACACTGACCTAATTTTTCTTTATTACAGACCATTCCTGTGGGCTTACCGTGAGACTTTCATCCCAATTAAAGAATCTAAGAGGGAGGAAATGCTTACGACTTTTGCATTTTTCCCCCAAACTTTAATATTCTTGAGTACTTGAATATATTTTTAACAGTTATAATCATGATCTAATATAGGTTATTAGAAATATTCTGTACATATTTGTCTCCATTATGTTCATAAGTTCTGAAAAATTATATGACCATGGTAATAGTTTATGATTATTAAAAATAAAATAAGTCTGTATTGTCAAAGTAATTAACCCATTTTCATAATCACAATAGTGTGATTTCTTTAGCAGAGAAGGTTGTTTTTTAAAATAAATAGTACCACTTTTTTTCTAAGAAAATAAGAGCTTTTTTTCTTTGTTGTTTTCCTCTTCTATTATATGTTAATGGAAAAGCTACAGAAAATTCAGTGCAGGTACTAATGAAGACACTAATGTAAGTTTAAAGGAACATGACTGTAAAAACTCACGAAATGCTTGGTTTGTTCATATTTCACAGGCATGTTTTAGAATAGATTTTAGATGATATTTCGTCCATTTTCCTTTCGGCATTTTTCTTTATTTGTTATCAACTTCCCAGGACTTAGATAAGACACAAATACAAATCCCAGGGGAAGTGTTGTGATGCTGGACTAGAAGGTGGGAATGCGCTGCTGACCAGAGTGAGCCATGTTCCAGTGTTGAAAATTCTATGCCTCAAGTGTTTATTCAGTACCACCTCATGGAGCTTCAGTGTACACAGATCATATGTGTAATTGGTTATTTATACAGTTTTGTAGATGTGTAGATAAAAAGCCCTCATTCATTTTTATATGTAATTGTGCTTGGAGTATGTGTTTTGTTCTTTTGACTTCAGCAGGCTCTTGTATGTTGTATCTTTGGTGATTTGAAATANN EMBV3_16642 GCAGGACAAAACCCACCTTCCTGCTGTAAAACCAAGATCACAGGTGACAAAACTGAGGCC Gene GeneID:504784|GATA5:NM_001034221:856_cdna Constitutive 0 NULL GeneID:504784 13 GENE GATA5 MGC127645 GATA binding protein 5 EMBV3_29713 GTGTGCAGACACATGTCAAGCCATCAGCAGGACGGTGGACGGATCTCTGACGACCATATC Gene GeneID:512826|GPIHBP1:XM_002692563:213_cdna Constitutive 0 NULL GeneID:512826 14 GENE GPIHBP1 NULL glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 EMBV3_14442 GCATTGAAAACTCTCATGTGTAGGGTTGATGCTGTGGGGGGTTTGGGATCCAGCTCATTC Gene GeneID:540369|DYNLL2:NM_001113303:45_cdna UTR3_Alt 1 NULL GeneID:540369 19 GENE DYNLL2 MGC127196 dynein light chain LC8-type 2 EMBV3_09900 GACTTGAAGAGAGACCGCCAAACCTCCTCCCTGTAGCCTTAACTCCTCTCGGTTATGACT Gene BVT0102_291100 + 0 NULL GK000020.2:31311785-31324012 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113668 TCONS_00113669 TCONS_00113665 TCONS_00113671 TCONS_00113667 TCONS_00113666 TCONS_00113670 1 XLOC_069094 Coding TCONS_00113665 XLOC_069094 Coding Coding C20H5orf34 20:31317777-31350850 j TSS84971 3111 1 TCONS_00113665_3 638 0.0675024108003857 14 0.906355829704886 0.00591660843575266 0.00552104005491797 0.00432761165105091 0.00263901064923117 0.00472077883139803 0.00118580221210908 0.00281927283109011 0.00291439846603584 0.00392436665978445 0.00146960504695308 0.000275612547515929 0.00024574533459295 0.000707440493462492 0.000880147796438271 0.000381128856235573 0.00100132614024785 1.61707907840595e-21 1.51808453845715e-06 0.00496787983525386 0.00517128131819441 0.000847208439460213 2.47446540610518e-10 3.14172541888659e-14 0.000449798438792471 0.00448630192928575 0.00482588323971325 0.00410721638803704 0.000335173090683315 0.000220186795376308 5.82953071681853e-05 NM_001083426.1 C20H5orf34 Bos taurus chromosome 20 open reading frame, human C5orf34 (C20H5orf34), mRNA. 0.0 3887 100.00 0.692381870781099 NM_198566.2 C5orf34 Homo sapiens chromosome 5 open reading frame 34 (C5orf34), mRNA. 0.0 2432 85.13 0.691417550626808 TCONS_00113665_3 sp|A4FUB0|CE034_BOVIN CE034_BOVIN Uncharacterized protein C5orf34 homolog; 0.0 1325 100.00 0.998432601880878 2 noncoding 0 0 0 0 -0.102346832643374 0.375691137709735 -0.0192543183242254 0.724644493020938 CGGTCTTCCTTTGTAAAAGGGGCGGGTTTCCTAGGGTACGGGAAGGTTTGAGTTTCGACTGTTTGCATTCGGTTCGTCTTCGCGGTTGCAGCTGCAGCTGTTCCTGGCTACTCGGACTTGAAGAGAGACCGCCAAACCTCCTCCCTGTAGCCTTAACTCCTCTCGGTTATGACTTTTCTTTCATCGGGAAACATCACTTGCTGGTAACTTGTCAAATTGAAGAAATACTCCTCGAGAAGCGTCGAAGGCAGGAACACAAGCTGCTACTCCGAGTATTTTGGCAAACTAAAGCACAAGGGCCATTGACTGGCCTCGTTTCCACGACTTTAAAGCTCAGAACTGCTTGCTGTGGGGCTTAGGTTGGATCCCTCGTCAGTGAACTGAGATCTTGCATGCCTCGAAGCTCGGCCAAAAAAAAGACAAAAGCAAGTTGATCCTGAGTGAATACTACACCTGAGAAGTTTACTGGTAGGAAACAGAGGTCTTATTTGCAGCATGTGGGATCTGGTTTCCTGACCAGGGATCAAACCCGGGACCCCTGCATTGAGAACATGGAGTCTTAGCCACTGGAGCACCAGGGAAGCCTCTGATTTGCTGTATTATTTTTGCAAAGATGGAATTTGATTGTTATTTGAAGTGAGATCCTGAGCATCCAATTTTCAGAAGTTAAACTTCAGAAGTAAAGCTACTAAAATAAGGGCAGTTATAACTTGGTGGGCTGTCTTCCCCCTCCCAATTATCTTCCCACACTACTGAGGTAAAGCCCTCGGGATTAATCAAGGCATTCAGGTCAGGTCAGGGTAAGATCATCACTTTTCATCCAAAAAAGTAAGCTCAGTGGCAGTGTGTTGTGCTTATGTTCATCCATTTATTTTGATAGAACTTTTGTACGTGAAGAGAACTGTTGGTGCTACTGTATTTGCTATTTCCTTCAGCCTTTTGCCTTGGAAAGACATTTTATCCACAGTCACAGTAATGGCGGCTGAAGTGCAAATGGTACTTTATGAAGATGATTCAGTGCAAGTGCAATATATTGATGGTTCCAGATTGCAGCTTTCTCCCTGTGGCTCTGAATTTTTATTTGAAAAGGCACCTCCTGTTTCAGCACATCCTTTACAACAGCCAGAAAGAATTCGCCAAAGGACACACTTCGTTATTAGCGCTTACCGAGAGCAGTTACAACGAGCCCTCGATTTTCGTAACTCTTTTGCTACCTGTCCTTTTTTATCTGAAAGCATCATACCTTCTGAAATGAAAACGCGTATCTTGATTGATGTCTCAGAAGTGAGATGGCCCAGTCTTGACACTGGTGATGGCATGACGTATATGCAGAGTGGCACTGTGAGGATATCATCTTTAGATGGTCATGCGTACCTTTGCCTGCCCAAATCTCAGCATGAATTTACAGTACATTTTTTGTGTAAAGTAAGCCAGAAGCCAGACTCATCTATAGAAGTGTCCGAAAAAAATAATAAAGGCAAAAAGGACAAACAGGTTGAAAAAGCTGGAAAAATCTGTACACGTGGAAGTTTATCAGGACAGAGACTGAAGAATAAAGAAAATGAACTTTATCATCAGATCATGAAATCCGAAGAACCTTCAGAGAAGAGTTGTGTGAATGGAGCCAAAGGGAGGGAGGTGCTGTCTTCACCTCATCCGAAAGACACATGTATATACACATGGGTAAAGCAGTGCTGGTCTGTGGCCTCCTGTCCGGAGGAATGGAAATACCCTTTGTCTTTAGCGCTTCATTTTCATGATAAAATCAGCAGTATGTCTGGAATTGATGCAGATATCACCCAGAAGAGAATGTTAACTTCTGATGTTTCTGAGGAACGAGGAAAAGAAGTTTCTGTTCTTCCCAGGGCCCTGTTACTGAGCTGTCCTGCCCCACACTTGCACAGGTGGAACTTTTCTGATTCACTTTCACAGAAACAGTTTGGTGAAGAGGAATATTCCTACCATGAACTAGTCAAAGTGGTCTGGTACAAGGGTGTTACCTATAGACTTACCCATAAACATATGAACTCAATAGAGATTTATCCTGGAGATGGATCTGTTTTCAAATCAGAAGGAGCTTATTTGGGGAACTATTTTACATATTATTCCATTCGAGAAGAATCAGAAGAGAGAGAAGAGAAAACTTACGCAGTAAATAACCTTCCTCCAGATAGGCCAGGAAGTCCGTTTTCTGTGTGTTCTCTAATTAAACAGGCAACCAGAATTCTTCAGCATTGTGCCAAGATGAGGCTCTCTTTAAGCCATAACTACCGTGTATGCTGCTGGAAAATGGTGCCTGGAATAAATGACAGCAGTGTACTGCCTTTGCTTTTGAGAGAATCGTTCGTGCCTGGTGTGGGAAGATTTCTTGCGTACTCAGATGACAAAGTACATGCTATCTTTTTAGATGGCATTACTTTAACCCTGAATTGGAATTTTGGCTCTTTTATTGAAAAGAGACAGGTAAATCGAGGTCTCACCTTAGGTTGGTGTAAGTTAACTTTTCCTGATGGACAAAATCAGTTAATTCAAATTCAACATCCCAGACCATATGAAAGATATGTGACAACAGTAATATCATGGTGCAGAAGGCTGACCCAGATTAGTCAGCAAGAAATACCCATACATCCTTCATCTTCTGTTCCTGAAGAAAGCTGGTCTGTGGCTTCTGAACTTGAAAAGATACAGAAGTTTAATTTGTTATTGGAGAGTAGTGGTGTCCTAAACCAGACTTCTAACAAGAAAAACAAACAGTCTTTGGATCGTTGTAAACCAAAATCTTCAGAAACCTTGCTAAAAGAAGTTAATGAAAAGAGTGTATCAGTGGCATTGAAAAAAACCTCTGAAATCCTTCAGGATATTGACAATCTTCTATCAAACTCTAAATGGTGAAAAATGGAATTAGTAAAATATATTATTAAACCCTGAGGATATTATTTCAAGTGATTGGTAGAATATTACTAGAAAGCCAAGAAATTATATATATACATGACTTGTGTACAATGATTATATGAGAAATGATATCTAACTTTGGAGGTGTTTTATCTAACTTGTAAATTTTAAAGTATATATTTGTATATAATTAATAAAGAACCATTTAAGAAACTTGAA EMBV3_26322 TCCTTTATGGCGGGAGCTAATAGAAGTCTCTGTTCTGTGTCCAAAGGAAGCATTTTCTAG Gene GeneID:532715|IQGAP1:XM_002696571:183_cdna Constitutive 2 NULL GeneID:532715 21 GENE IQGAP1 NULL IQ motif containing GTPase activating protein 1 EMBV3_23395 GACTTTGAAAAAGGGCCTTGTAAATATTGCTACATTTTCAGAAGTTGTATGTTTTCTAGG Gene GeneID:515328|CCDC125:XM_002696282:30_cdna Constitutive 0 NULL GeneID:515328 20 GENE CCDC125 NULL coiled-coil domain containing 125 EMBV3_30761 AGGGTGCTTCTCAGACTGTGTCCCCCATGGTACAAAGTGACAAACTCTGCTGGATCAAGA Gene GeneID:507194|MFSD10:NM_001075304:16_cdna Constitutive 0 NULL GeneID:507194 6 GENE MFSD10 MGC139677 TETRAN major facilitator superfamily domain containing 10 EMBV3_28196 GGCCTCGTCTATTTTCTTCTCATTGAAATCCACCACCCAGATCCGAACCCAGACTTGGAG Gene GeneID:516762|AQP9:XM_002690854:205_cdna Constitutive 0 NULL GeneID:516762 10 GENE AQP9 NULL aquaporin 9 EMBV3_24128 TTTCTCTGACGTGTTGTGCTTAGCGCTGGCGGCCCTGGTCTACTGTGTCAAGAAGATCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17224 CACAGTGAAGATTCCTAGAGAAACGATTTAGTCTTAAGGACCTCATCCCCCCTGCCTACC Gene GeneID:512700|FLT3:XM_002691856:149_cdna Constitutive 0 NULL GeneID:512700 12 GENE FLT3 NULL fms-related tyrosine kinase 3 EMBV3_09331 GGGAGAGAAATGCAGATGTCGTGCTGGAGATCAGGCCCTGTGCACTAAGATATAGGAACA Gene BVT0102_028824 + 0 NULL GK000003.2:114027241-114040629 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09042 CCCCATTCATGGACCGGGACAAAGTGACCAAAGCCACAGCCCAGATTGGTTTCATCAAGT Gene GeneID:511665|PDE9A:XM_002685134:98_cdna Constitutive 2 NULL GeneID:511665 1 GENE PDE9A NULL phosphodiesterase 9A EMBV3_02028 GGTTTCTCCCATCTCGATGTAATGCTGGTGGAATGCTATGACCCAAAAGGTGACCAGTGG Gene GeneID:517316|KLHL14:XM_002697683:184_cdna Constitutive 0 NULL GeneID:517316 24 GENE KLHL14 NULL kelch-like 14 (Drosophila) EMBV3_03867 TGCAGTGAACAGAGTTCCAACCCCCACCTGCCTCGATGTAATTCACAGCTGCCAAGATGA Gene GeneID:531956|GFRAL:XM_002697172:200_cdna Constitutive 0 NULL GeneID:531956 23 GENE GFRAL NULL GDNF family receptor alpha like EMBV3_29861 AAGCTGACCGACAGACTGAAGAATCTGGGGGCCAACCACGTTGTCACAGAAGAGGAACTA Gene GeneID:353301|MECR:NM_181669:57_cdna Constitutive 0 NULL GeneID:353301 2 GENE MECR MGC134158 NRBF1 mitochondrial trans-2-enoyl-CoA reductase EMBV3_09566 GAAGTCCCAGAAGTCGTATTCCTTTAAACCCTGCTTTGGTTCCCCTGTGGACATGACCCT Variant GeneID:516094|CDC7:NM_001037468:141_cdna 64^262 3 EMBV3_14961 GeneID:516094 3 GENE CDC7 CDC7L1 MGC128732 cell division cycle 7 homolog (S. cerevisiae) EMBV3_24892 CTATAAAGGCAGAGCCCTACAATTAAGGCGGGAAAGGTGGGCTGGAGACAGCAAACGGAA Gene BVV0102_235770 + 0 NULL GK000002.2:127255332-127266787 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106685 TCONS_00106689 TCONS_00106691 TCONS_00106690 TCONS_00106686 TCONS_00106688 TCONS_00106687 1 XLOC_062871 Coding TCONS_00106688 XLOC_062871 Coding Coding DHDDS 2:127256244-127295155 j TSS78476 3447 1 TCONS_00106688_2 330 9 0.911642251349268 0.00222607905844805 0.00265644728062935 0.00107308651882063 0.00274861995253909 4.89511531147284e-08 2.85720508601069e-09 0.000609906884522877 2.43476951697417e-18 2.4073832780728e-10 1.36062887368896e-05 0.000256348221373287 1.37621800668803e-10 7.75205250022854e-09 1.57751435454633e-06 1.055897968057e-07 0.00244377863358612 0.00116161070894123 1.90557989860185e-31 7.09209831098723e-08 0.000903956367608552 4.13716546436744e-28 1.22641694367739e-14 0.000746070594420484 5.01439791687024e-05 0.000665519135976904 0.00209534254555038 0.000349670798409558 1.85354043473787e-13 0.000772522664049008 0.00113831253691278 XM_005203182.1 DHDDS PREDICTED: Bos taurus dehydrodolichyl diphosphate synthase (DHDDS), 0.0 5618 99.87 0.905425007252683 NM_205861.2 DHDDS Homo sapiens dehydrodolichyl diphosphate synthase (DHDDS), 0.0 2432 84.42 0.644328401508558 TCONS_00106688_2 sp|Q86SQ9|DHDDS_HUMAN DHDDS_HUMAN Dehydrodolichyl diphosphate synthase; 0.0 619 95.50 0.939393939393939 1 coding 0 0 0 0 -0.0405748039310371 0.703170199777415 -0.017943842483623 0.724509931136387 GTTGGAAGGCCCTGGTAGTGCTTGTCAAGAGTTACCTGGTTGGTGTCTGATCGTCCTGTGCTGCTTCTCCGGGGCAAGAACTATGTCATGGGTCAAAGAAGGAGAGCTGTCATTTTGGGAGCGGTTCTGTGCCAATATCATAAAGGCCCCATGCCCAAACACATTGCGTTTATAATGGATGGGAACCGTCGTTATGCCAAGAAGTGCCAAGTGGAGCGGCAGGAGGGCCACTCACAAGGCTTCAACAAACTGGCAGAGACTCTGCGTTGGTGTTTGAACTTGGGCATCCTGGAGGTGACGGTCTATGCGTTCAGCATCGAGAACTTCAAACGCTCCAAGAGTGAAGTAGACGGGCTAATGGATCTGGCCCGGGAGAAGTTTAGCCGCCTGATGGAAGAACAGGAGAAACTGCAGAAGCATGGGGTATGTATCCGGGTCCTGGGTGATCTGCATTTGTTGCCCTTGGATCTCCAGGAGCTGGTCGCACAGGCTGTGCAGACCACCAAGAACTACAACAAGTGTTTCCTGAACGTCTGTTTTGCTTACACATCCCGTCATGAAATCAGCAATGCTGTAAGAGAGATGGCCTGGGGAGTGGAACAAGGCCTGCTGGATCCCAGCGATGTCTCTGAGTCTCTGCTCGATAAGTGCCTCTATACCAACCACTCTCCTCACCCTGACATCTTGATACGGACTTCTGGGGAAGTGAGGCTCAGCGACTTCCTCCTCTGGCAGACCTCCCACTCCTGCCTGGTGTTCCAGCCTGTTCTGTGGCCAGAATACACGTTTTGGAACCTCTGTGAGGCCATCCTGCAGTTCCAGATGAACCATAGCATGCTTCAGAAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGACCAGGCTGCAGTGACAGAGCAGCTGCTGCAAGAGGGGCTCCCGGCCAGTGGGGACCCCCAGCTCCGACGGACACGCTTGCACAAACTCTCAGCCAGACGGGAAGAGCGGGTCCAGGGCTTCCTGCAAGCCTTGGAACTCAAGCGGGCTGACTGGCTGGCACATCTGGGCACTGCATCAACCTGAGTGAGGCTGGCCTCCTGCCACTTTGCCCTACCCTTGGCCTCCAGGGCCCCACTCCCCTTTCTTTTCTTGGCAAAAGGCACCTCCCTCCTGATGGATGAATTGTGTTCCTTGGCTTAGCAAGGAAGCCCGAGGCTAGGTCTGCTGGCCAAATATCTATGGGCCACCTGGGACAGTGCCGCTGGGGAGAGGGATGGGGGTGAGTCTCAAGTACCCTGAGCCCAGCTGTGATCACCGTAGGTCTGGGGAGCAGAGGGCCCCAGCTCTTCCATCTTTGCCACCTCTACCTGTACTTCTAGGTGCATTTTGGTTTTCCACCAGCACATCCTTCAACACACAAAATTTGGGGGAAGAGGTCTCCCACAAACCTTGGCCCTTTACCCATCCATCTTAGCCATCACAAAAGATGTGGCCCCACCATGGATTTGCTGGTAAAGAGCTAATAGATGGCCAGCATGATTTAGGCAAAGGGGAGGCAGAGACAGAAAATTTGCCCATCTGCTGCTCCTCCTCCTTGGCTCTCCACCTGGGATTTGCTATTGAATCTTACCCCCTCCCACCACGCTGGGCTGATTGCTCACTGAAAGGCTCAGCGCCCCCAATGGTGCGAGGAAGCCAGGCGGGTGATTACAATCCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCACTCCCCAATGAGACGGGCCCCCTCCATTGCCACAGGGTAACAGAAGAGCCTGTAGGCCCTGGTGAGTCTAATCTAGCACAGGCCACCTCCCATGGATCACATGAGGACCAAGAGCACAGAAACCAGCCCATCTCCCAACTGACTGCCTCCTGCCCTCAGCATCTCGGACTCTGCTTCCCACCTCCACAGCCTTTGAGGCTTTTCTCAGCTTTTGACCTGGCCCCCTAAGTAGGCTGTGAGATGATTTAGTCTCAGCATGGCAGAGTCTCAGCTTGTGAGGGCCAAGGTTGCCCAGCAGGGAGAAGAGGGCCAAGTCAAGGGTTGTGTCCTTTCCCTTACCTCTCCCTGCCAGGCCTGGCTACAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAGCTGTCTGTCTGAGCAACTCCATGCTTCAGGTGCCCCACAGCAGCAAGCACCAGCGGGTAGTACCAACCAAACGCTGTGTCTTCCCATTTTACTTTCTGCAAACTATTTCCCCAGCACCTCCCTCTAGGGGAGAGGTGGGGTCTTGCAAGCAGTGCTAAGAACATATTCTTTAAAACCCCTAACTTCCTTGTATTCCAATCGTCTCCCCTTTCTGTGCCTGGATACCTGGCACAAGAGACCCCTTGGCCATCATCACTGCTCCCAGAATCAGGCATGAATGCCAGACACTGTGATGGAAAAGCCAATCAGTGCACCCTTTGGCAAGTCCCCCACACACACCTGGCACTCCCCACTACCAATGGCTGGCACAGGGTTCCCAGAGAGCAGGTGCTGTACATTTTCCAGCTTTACAATGAGGCTGTTGACAGCCTTAATTAGGGAGGCATGAATTATGCGGCTATAAAGGCAGAGCCCTACAATTAAGGCGGGAAAGAGGGGCTGGAGACAGCAAACGGAATCTGCCCTGTGAGCATGGTAGTTGAGTCCTTGTCTCCTTTCTGGGTCTGACTTTCCCTAACGTGATCAGGGGTACCGCAGAGGTGATTAATGGGCAGGTATCTCTCCGGCCTGAGGTCCTGTATTCTGGGAGAGGTACACGGGGTGGGGGAGGGGCGAGTGGCTGCCTCGGGAGGCACGGGAGAGGTGAAAAGCAGCTGAGGGATCACGGATGCTTTGAACCGGGCTGCAAATAGTTGATACGAAGTCACCGTGATTGCTTTCGACCGGTATGATTTGTACAAACCAGCTCAACCCTTGCCTCAAGAAACTCGGTGCGACCTATTTAAATGTCCTCCCACCTGTGAGCCAACCCCGCCCCCCCCCAACTTGAGGATATTTATCGTGTTGTGTTCTCTTGGGTGTCAAATAGAATTTTAAAAATTCTTTCTTAGAGGTAAAACTTGTTTGCGAGGGCAACAGAAGACCGCGTTTTGCTGCAGCAATTGTCCACCTCCCTCAGGTGCACTCGGCCACTTCCAGGATCCCTAGCTTTGGGGGCGGAGGGCGGGGAGCCACTGGAAGAGCCCTTTTGCCATCGCAACACCTGTTCTCTACTTGTTTCCTAATCCCTGGACGCTTTCCTCCACCCTCCTTTTCCTCGCGCAAGTGAAAGGAAGCCAGCCTGCCAGTGTGGAAGGAGGGATTTCGCCAGCTGCGTTAGCAGCGCCCAGGCTTGGTGGCCGCGTCGGGTGGGGGCAGCTGAGCTTGATG EMBV3_42497 TCCTGCAGTATGCACAGACCACTGATGGACAGCAAATCCTAGTGCCCAGCAACCAAGTTG Gene GeneID:281713|CREB1:NM_174285:5_cdna Constitutive 0 NULL GeneID:281713 2 GENE CREB1 CREB cAMP responsive element binding protein 1 EMBV3_37764 TACCAAGCTAAGTAAGTGGAAGCTGAGACCACAGGGACTAGTAAAGCCCACACAGGCTCC Gene GeneID:614354|LASS3:NM_001099389:59_cdna UTR3_Alt 2 NULL GeneID:614354 21 GENE LASS3 NULL LAG1 homolog, ceramide synthase 3 EMBV3_34782 CTACCGTGTAGAGCTGTGTGTGGCTTCTAATAGGTCCCTGGCGATTACTGAACCAAGTGG Gene GeneID:504436|ZNF235:XM_002695085:516_cdna Constitutive 0 NULL GeneID:504436 18 GENE ZNF235 NULL zinc finger protein 235 EMBV3_15328 GTTTTGTTCTGTATGCCTGAGCTGCTTGGCTCTGGGGTTCCCACTTTTTCCACCTGTGCT Gene GeneID:281855|IKBKG:NM_174354:16_cdna Constitutive 0 NULL GeneID:281855 X GENE IKBKG NULL inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma EMBV3_16858 GCTGGTGGCCCTCTCAGAGTGCATAGTCATATGGCCTATGTGGGCAACATCACCATTGGA Variant GeneID:337907|PAG11:NM_176623:25_cdna 54^204 1 EMBV3_29539 GeneID:337907 29 GENE PAG11 NULL pregnancy-associated glycoprotein 11 EMBV3_10023 TGAAGTCTCACACAGCAAGCCAAAACAGAATCAAGCTCCGTGGCTTTCTGGATTTGAGGC Gene GeneID:616167|LOC616167:XM_002691894:22_cdna Constitutive 0 NULL GeneID:616167 12 GENE LOC616167 NULL similar to Hist1h4c protein EMBV3_31429 TGAAGGACGAGCTGGCTGTCAACAAGCAAAGCTGCAGTAGATGGCCCCTCGGACAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05823 CTGCTGGGCACAGTGAGAAGCGAGACAGGAACTGAGTGGTCGATACCCACAAAATCTGAT Gene GeneID:525350|TARSL2:NM_001102089:106_cdna Constitutive 0 NULL GeneID:525350 21 GENE TARSL2 MGC140122 threonyl-tRNA synthetase-like 2 EMBV3_03202 GTGGTCTGAGTACAGATCCTTAAATATATTATATGTATTCTATTTCACTAATCATGGGAA Gene GeneID:281170|FRZB:NM_174059:2_cdna Constitutive 2 NULL GeneID:281170 2 GENE FRZB MGC137621 frizzled-related protein EMBV3_33635 CAAATGAGTCAAAAACATAAGCAGTTGATATGGGTAAAGGTTATGGATCTGGGTAAAGGG Gene BVV0102_398174 + 0 NULL GK000003.2:38863951-39113921 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26159 CCACATGGATGGGGACAAGGGTCCCCGCAGGATGAATCTGAGGATACAGACAGTGACGGA Variant GeneID:540345|DRAP1:NM_001076214:89_cdna 434^527 1 EMBV3_19212 GeneID:540345 29 GENE DRAP1 MGC134551 DR1-associated protein 1 (negative cofactor 2 alpha) EMBV3_17326 GAGACACTGTTTGTGGGCAGGAAGGTTTGTGGGTTCACATTTATTCAACTGGCCACAGCC Gene GeneID:511117|LOC511117:XR_083704:84_cdna Constitutive 0 NULL GeneID:511117 6 PSEUDO LOC511117 NULL similar to major facilitator superfamily domain containing 7 EMBV3_42641 GCAAGTTAAAACATACCATCGCCCTCTGGCAGTTCCTCTCTGCCTACAAGTCTGAACAGC Gene GeneID:509283|RNF213:XM_002696144:302_cdna UTR3_Alt 2 NULL GeneID:509283 19 GENE RNF213 NULL similar to mCG142721 EMBV3_31209 GGAGGTTTGTCAGATTTAAACAGATTTTTAAGGAGCTATACTCTTCTGGGACAGCATGGC Gene GeneID:788468|ZFP106:XM_002690810:37_cdna Constitutive 0 NULL GeneID:788468 10 GENE ZFP106 NULL zinc finger protein 106 homolog (mouse) EMBV3_14924 CTTTGCTCTTCCAGCAAGCAGAGTCATGAGCCGATGCCGTTTTGGCATTACTGGTCCACT Gene BVT0102_388310 + 0 NULL GK000001.2:6415131-6475461 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002917 1 XLOC_000736 NonCoding TCONS_00002917 XLOC_000736 NonCoding NonCoding - 1:6465511-6470209 - TSS1503 947 5 TCONS_00002917_1 53 0.232312565997888 2 0.798807749627422 1.49624756489336e-10 3.84340916291446e-10 5.29331573143097e-10 0 3.24606878471672e-10 3.20455539851451e-11 1.43306984163878e-09 1.56655501548059e-09 8.59223327392838e-05 0 2.84824825536191e-11 0 8.19573300524551e-10 5.82278939444729e-10 1.00172578461212e-09 6.63531033107996e-09 4.0944754407035e-09 0 0.000767892938377156 9.17439138500541e-11 0 1.78876777423053e-09 2.2483032849107e-09 3.92771952679045e-09 1.90369448533164e-09 2.50502235343038e-10 1.02141505455862e-09 2.99067338593822e-09 1.17777771243586e-09 3.35320518875403e-11 XR_138605.1 LOC100851369 PREDICTED: Bos taurus uncharacterized LOC100851369 (LOC100851369), 0.0 1312 99.59 0.777191129883844 NM_020152.2 MAP3K7CL Homo sapiens MAP3K7 C-terminal like (MAP3K7CL), mRNA. 6e-10 69.8 75.73 0.106652587117212 0 noncoding ATGTGAGGGTTGCAAGGTGGTGGGGAGACAGAGTCTGTTTTCATGCTGCTTTGCTCTTCCAGCAAGCAGAGTCATGAGCTGATGCCGTTTTGGCATTACTGGTCCACTAGTTACTCTGCGTGCAGGGGCAGCTGTGGTGATGGCGAAGGCTTCTTATCCTGGCTTCCTGCTCTTTGCATCACAGCTGCAGTGGTGTGTTCTTGATCTCAGGCTGTCCAGTGACATTCACTCTTCTGAATCTATTCCAAGCTGCACTGCTGAGATGAAAGTTAAATTGCTTCAGGAATCTTGATGAAGAAGAAGGAGACAGGCTACCAAAAGTCCCTTCCAATATATATACATATATATATTTTTGTTTTGGTCCCCCTACGACATCATCCAGGGATCTTTGACAACTTAAGAAAACAGTTTAACAACAGTTAGAAATTAACTTCCTGAGATGAATAAGGAAATGTACTTAGAAAGGCTAGAAAGCAATACGTGTCAGAACATGCAAGGCAAGGTTTGAAGCATGTAAAAACACACAGTCACTCAAGATGATTCTCATACTTTGCAAAAATTACAAAGGAAAAAGGAAAAAAAAAAGTAGCAAGGAAAATACGTGTCTCCAAGCCTATGCACTTTCTCCTTCCTTGAAATCTGGAATGACTCTTAGGCCTTTGCTTGGGGCCTTTGGACTGAGAATTGTGAAATAATGCAGCTCATTCCTAGAAGCTTTATCTTGTGGTTTCTCAGACAGATCAAATGCCAACAGGTGTGGGCAAACGCAAGCCAAGAACAATCAGACCAAGTGACAGATAACAGCCAGACAGACAAGGACACGACATACTTAAAGGAAATTTGAAAAACTAGAGAAACATAATTGGGGCTATTTAGTGAAGCCATTGCATATATCAGTGTTTTAAAGTGATCATTGGCTATAAATAAAGAAAATAACAATTCTTGCA TCONS_00000164 r 5' 9189 TCONS_00000164 r 5' 5217 EMBV3_01821 AACCGTTCGTGTCTCGCGCCACTTCCCCATGAGCGGCTTCAGCCTAACGGTCCTAAATCT Gene GeneID:100137858|LOC100137858:XM_002707888:87_cdna Constitutive 0 NULL GeneID:100137858 X GENE LOC100137858 NULL hypothetical protein LOC100137858 EMBV3_31436 TCCCAGTATTTCCATTTGCTTTACAAGAACCCAGAACAGAGCCACTCCTGGACTCAGCCC Gene GeneID:513802|AKAP10:NM_001098024:27_cdna Constitutive 0 NULL GeneID:513802 19 GENE AKAP10 MGC148842 A kinase (PRKA) anchor protein 10 EMBV3_12060 GACTGCAGCAGGGAAAGAAGCATGACAGCTTGTGACAATTTCCTCAGAGTCTCCAGCACT Gene BVT0102_027063 + 0 NULL GK000001.2:135518802-135731144 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37620 GAATGAAAGCTTTTATTCTGCTTTTCCTATTCAAATTGTACATAAGGGCATGCAATCAAT Gene BVV0101_014967 + 0 NULL GK000021.2:2499609-2695652 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22565 AGGTGCTCAGTAAAGGTGACTGGATTACTGGGTGAGTGTGAGTGAAGCAGGGGACCGATT Gene GeneID:614579|MRPL14:NM_001076337:353_cdna UTR3_Alt 1 NULL GeneID:614579 23 GENE MRPL14 MGC138975 mitochondrial ribosomal protein L14 EMBV3_43551 GTAGCGCTGCTTCAGGTCATACTTGATGATGTTGCGGGTGAAGGCCCGGTTGTAGTAGAA Gene GeneID:100297384|LOC100297384:XM_002685882:58_cdna Constitutive 0 NULL GeneID:100297384 3 GENE LOC100297384 NULL hypothetical protein LOC100297384 EMBV3_31494 TTGGGGAACCACTGTCTTAAGAGTTCCTGCCTAGTGTTTCTGCTGTCTTCTGTTGGCTGG Gene BVV0102_010164 + 0 NULL GK000002.2:71427011-71473552 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02595 TAGTCCAGACAGCTATACACCTCCAGTTCCACCACCTGTTTATCAAGAGTACCCCAGTGG Gene GeneID:509632|RSPH4A:XM_002690087:48_cdna Constitutive 0 NULL GeneID:509632 9 GENE RSPH4A RSHL3 radial spoke head 4 homolog A (Chlamydomonas) EMBV3_02647 GCTGTATGGGTGGCATGTTAGCAATTTGTGATGTAGCTGAGTATAGGAAGTGTGCCAAAG Gene GeneID:531907|EXOC5:XM_002690915:205_cdna UTR3_Alt 2 NULL GeneID:531907 10 GENE EXOC5 NULL exocyst complex component 5 EMBV3_03357 CTGCAGCTTCTTTTGGACTACGGTTGTCAGAAACTAATGGAGAGAATTCAGAATCCTGAG Variant GeneID:282100|TRPC1:NM_174476:12_cdna 338^439 3 EMBV3_26061 GeneID:282100 1 GENE TRPC1 NULL transient receptor potential cation channel, subfamily C, member 1 EMBV3_23491 ATTCCGGGGACTGGTGTGAAGGTAAAGCTCCGCCCTCCCCCACCCTTGATGTTGTGAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20334 TCTAGGCAGTATTTTGATGGTTGGGAGGCAGAGGCTTTGGGTGGGGTAGGGAACAGAGAT Gene GeneID:100298868|LOC100298868:XM_002686965:47_cdna Constitutive 0 NULL GeneID:100298868 4 GENE LOC100298868 NULL similar to solute carrier family 23 (nucleobase transporters), member 2 EMBV3_34163 CGGCGTCTGTGTCCCTGGCAACAGACGACAGCCAGTCGGTGAAGAAATAGAAATGGTGGA Variant GeneID:538541|TSPYL1:NM_001076111:28_cdna 397^628 2 EMBV3_30507 GeneID:538541 9 GENE TSPYL1 NULL TSPY-like 1 EMBV3_31266 CACATCAAGTTCAAGGAGTCTCTTGTTAATGGGAGCATGTAACGTCAAGGTTTAAAAACG Variant GeneID:535099|MTMR3:NM_001081605:74_cdna 470^752 3 EMBV3_02652 GeneID:535099 17 GENE MTMR3 MGC143436 myotubularin related protein 3 EMBV3_08342 CCCCGTCAGTGGAAGACCTCCAGATGCTGACTAACATTCTCTTTGCCATGAAGGAGGATA Gene GeneID:511751|FEZ1:NM_001024522:17_cdna Constitutive 0 NULL GeneID:511751 29 GENE FEZ1 MGC139787 fasciculation and elongation protein zeta 1 (zygin I) EMBV3_15273 TGATCAATTTGGATGTAAATAATCCTGATTTTAGACAAGCATATTCTTGGTTTTGACACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00459 GAATCGACAGAGTATGGAGGCTCGTGGAAAACTCTTGCAGTTAATAGAGCAGCAGAAGCT Gene GeneID:515350|CCDC52:NM_001038117:68_cdna Constitutive 0 NULL GeneID:515350 1 GENE CCDC52 MGC134254 coiled-coil domain containing 52 EMBV3_33170 GGCATGCATCCATCCTCACACCTCTCTTTCTAGTCCAGATGGTACTGATGGTGGCGATTC Gene GeneID:519071|LOC519071:XM_002693237:491_cdna Constitutive 0 NULL GeneID:519071 15 GENE LOC519071 NULL similar to olfactory receptor MOR23-1 EMBV3_07214 AGTCCCAGATGCTGTATCCTGCTGGTAGTCATGCCCCTAATCCTTGCTCAGGCTTACTCT Gene GeneID:527248|LOC527248:XM_002691565:27_cdna Constitutive 0 NULL GeneID:527248 11 GENE LOC527248 NULL similar to olfactory receptor 356 EMBV3_26077 TGGGAAGCCTCTGTTCCTACGTTAAGAGCCCCAGCATTACTGCCCCTACTTAGCTCATTT Gene GeneID:616704|MCC:NM_001083523:54_cdna Constitutive 0 NULL GeneID:616704 10 GENE MCC MGC139266 mutated in colorectal cancers EMBV3_22722 ATGACTGCATGCCAAAGTTCCTGAGTTCCTGTGGGTCCGATGTGGTTCTCAAGAAAGGGA Gene BVV0102_101276 + 0 NULL GK000004.2:103689158-103715431 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189934 1 XLOC_115971 NonCoding TCONS_00189934 XLOC_115971 NonCoding NonCoding - 4:103708209-103708928 - TSS142302 719 0.915159944367177 1 0 0 0 0 0 0 0 0 0 6.58425968351728e-05 0 0 0.000139247712866991 0 0 0 0 0 0 0 0 0 0 0 0.000443015155407894 0 0 0 1.33590629193921e-05 9.45265913670339e-05 0 0 noncoding 0 0 0 0 -0.0162781158197165 0.896970221347533 -0.00243373090260667 0.970968998454947 ATCTCCAGTGGAATCTGAGGGACATAGGAGTCTGACTTACTCCTTAAAGTCTAAAGACAAGTGAGGAGTAGGTGACTAGCTCCTGGAGAAGACATTAGAGGAGAGAAGGCTGCATGGGGAGTGTGGCATGACTGCATGCCAAAGTTCCTGAGTTCCTGTGGGTCCGATGTGGTTCTCAAGAAAGGGAATCAGATTTGCTCATTTTAAGAAGGAACCCAGCCAAAGGGAACACCTGGATGGATGAAATGACTTCAGTGGAGGGGCGGATCCTGGAAACTAAGCGGCGGGTGCAGGCATCCTGAGTAACTAGAGGACACGGCCCACAAGGGACTGCAGCTGAGAGATCCCCAGAGAAAGAGGAACTATTGAGCTATAAAAAAAGCAACGCTGGAATCTGCTGCTCCTAGAGGTCACAGACACCAGCTTATCTCTCCACCAACAGAAAGAAACCTCATCTCTTCTCTCCCTTGCTGCAACTGCTGCTGCAACAGCAGCCAGCAAGGAGGCAAGAGGGGGTGAGAAACAGAAATGACACTGACCCTGGTCCCCCTTCTCTTCACATTTCCAGGCTGGAGGAGGAGAGAAATGTTAAATCAAAACTGGCGTTTGCAGTTTTGATCTGATACTGGATGAGACTGGTTCATACCTAAAAAGAAGACTGTTTTTTAAAATGATAACTCTAACCTGTTTGTCACCTAAAAGAAAAAAAGCCGTGAATT TCONS_00182610 . 5' 6449 TCONS_00182610 . 5' 6449 EMBV3_18680 CCTGGACATGTTTTCTGTGATGAGTGAAATGGCTCCCCGTGACCTCAAAGCCTACTATGC Gene GeneID:539263|CIB3:XM_002688553:184_cdna Constitutive 0 NULL GeneID:539263 7 GENE CIB3 NULL calcium and integrin binding family member 3 EMBV3_20134 CAGTCAATGAGCTTGTGACCTTTGTGGACATTGGGGTGGTAGTTGCCAGTTGCTTCTCAC Gene GeneID:507759|LOC507759:XM_002690728:427_cdna Constitutive 0 NULL GeneID:507759 10 GENE LOC507759 NULL similar to olfactory receptor 1510 EMBV3_05252 CCTCACTGAAGGAGGACTGATCTTCACCTTGCCTTTGGGTGGTATTCTGGGCTCCTATAT Gene GeneID:513584|LOC513584:XM_002683726:2_cdna Constitutive 0 NULL GeneID:513584 11 GENE LOC513584 NULL similar to olfactory receptor EMBV3_32797 GTGTTCTTTGGCATCTACTCGACCATCTGGCCCACCATTCCCATCGCTCCAGACATGAAA Gene GeneID:508723|ATP8A2:NM_001163802:28_cdna Constitutive 0 NULL GeneID:508723 12 GENE ATP8A2 NULL ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 EMBV3_21557 TCGCCGCCTTGGAAAGAGGCTTTCAGGCAGTTGGAGGAGCCGATGGACCTGGCTGTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10665 CTAGAATTCGTATTGATGCTTTGTTCTTGCGGAGAGGGGTAGACTGGGGAGTGCAGTAGC Gene GeneID:789104|KCNAB3:NM_001081627:129_cdna Constitutive 0 NULL GeneID:789104 19 GENE KCNAB3 MGC154963 potassium voltage-gated channel, shaker-related subfamily, beta member 3 EMBV3_42715 CTGGGCCTTTGGACGGCCTTGCAGTGGACACGTATTTTTGCCCTCTCCTTCTTTATAGCT Gene GeneID:281483|SEC1:NM_001130745:35_cdna Constitutive 0 NULL GeneID:281483 18 GENE SEC1 NULL alpha-2-fucosyltransferase Sec1 EMBV3_05032 ACATACCACTTGACCTCCGCGGGAGAGAAGCTCACAGAAGACCGGAAGAAACTCCGAGAT Gene GeneID:513526|SNRNP25:NM_001166612:11_cdna Constitutive 0 NULL GeneID:513526 25 GENE SNRNP25 C25H16ORF33 small nuclear ribonucleoprotein 25kDa (U11/U12) EMBV3_10934 GGGAGACCCTGCCGCCCACACCATGAAAGCACTTTGAAGTTTGTTCCCTTTTTCTTAAAG Gene GeneID:516719|MGC137708:NM_001046227:235_cdna Constitutive 0 NULL GeneID:516719 18 GENE MGC137708 NULL hypothetical LOC516719 EMBV3_40957 ATCCGTGTCAGATGTTAATGGAACAGCATCATTTTTCTGCCGAGGTGGCATCCCCTGGGA Gene BVV0101_044878 - 1 EMBV3_11810 GK000008.2:86424892-86491136 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26775 CATCATGTTACTGAAGTTGAAGGAGAAAGCCAACCTGACCCTGGCCGTGGGGACAATCCC Gene GeneID:540321|CMA1:XM_002696686:365_cdna Constitutive 0 NULL GeneID:540321 21 GENE CMA1 NULL chymase 1, mast cell EMBV3_29244 TGCCACAGTCTGCTTTTTTGTCTTTGAGGGGAGCATCTAAAAGGGCATCCTTAAGCCCAC Gene GeneID:100140359|IGDCC3:XM_002685458:101_cdna Constitutive 0 NULL GeneID:100140359 2 GENE IGDCC3 NULL immunoglobulin superfamily, DCC subclass, member 3 EMBV3_05250 CTGGAGACATTTCTACTGGTACCTCACCAACGAGGGCATCCAGTATCTCCGTGATTACCT Gene GeneID:540965|RPS10:NM_001034716:155_cdna Constitutive 0 NULL GeneID:540965 23 GENE RPS10 MGC127433 ribosomal protein S10 EMBV3_17842 AAACACCCTGAGGGAATAAGGCAGCGCACTTTTGATATACATTTGGTGGAGAGAATCAGG Gene BVT0102_015513 + 1 EMBV3_21375 GK000029.2:12549166-12555260 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163116 1 XLOC_099808 NonCoding TCONS_00163116 XLOC_099808 NonCoding NonCoding LOC522004 29:12548863-12553788 x TSS122315 1513 1 TCONS_00163116_2 62 0.415069398545935 3 0.693338748984565 0 6.64139053770096e-06 1.83489774179407e-05 0 3.58948802426494e-05 0 8.86511942068035e-05 3.90927136194151e-06 0 0 3.3286234737326e-05 0 0 0 0 0.000820450971247744 0 0.00142065729718764 0 9.50619237699145e-06 8.4270100223739e-05 5.50180240549476e-06 0.000115206213777538 3.92323943271109e-05 0 0 2.32351902352605e-05 0 3.20859698311767e-06 9.93430848882996e-05 XM_005216152.1 TRIM21 PREDICTED: Bos taurus tripartite motif containing 21 (TRIM21), 1e-72 279 88.99 0.141440846001322 0 noncoding 0 0 0 0 -0.0159355667833515 0.917614456699456 -0.0218636322632803 0.706186759821048 CTATTATTGAGGGTGCCCACCGCCAGCCTCTTTGATAATCGCTTGGTACAATTTCTCACACTAATTTTGTAAGGTGAAGAAACCAAGATTTGGCCAAGATCACATAGCTAGGTGATAGGGAGTTAGAACCCACTATGACTGACTCCAAATTAATCCCGTGTTTGTAGCCACATTATAATAATGGTAAAGACTTTCCTTTTTGCTCTGTTGTATGGATAAACACCCTGAGGGAATAAGGCAGCGCACTTTTGATATACATTTGGTGGAGAGAATCAGGAAAGAAAACAGACAAGCAGAAAAAGGAAAATCTCCCAAAATAAACTTGAATTAAAGATAAAAGCAGAAATTAATGAAACAAATAAAATTGATCATAATAGTAGCTGGTGTTTGAAAAGAACAAATAGCAAATCTGAGGAAGAAAAGGAAAGAAAACGGGAACAAGGGGAACATATTACAGATATGAGGGACTTTGAAAACAGAAGTGAATTATTTGTGTGTGCTCAGTCACTCAGTGTTGTCCAACTCTTTAGGACCCAGTGGACTATAGCCTGCCAGGCCCCTCTGCCCATGGAATTTTCCAGGCAAGATTACTGGAGTAGGGAACCATTTCCTTCTCCATGCAATCTTCCTGACCCAGATATTGAGTAATCATTGTAGTACTTTGTAAATTAGAAACTTGAATATACATTAGGGAAAGAATGGCTAGATAAATTATGTTATATTCATATAATGAAATATTACATGAGGAGAAATGCAGCTCTCCATGCATTAATCAAAATGAAAATAGTTGTAAGACAGTAAATGAAAAAGAAGGCAAAACAATACATATGTGATCTCATCTAATTTCTAAAAATTAGTTTGTAGAATTTTCCAAAGTTTGGTAAAGATCTAAATTGTTAACTCAGTGGCTACTTTAGAGAATAAGATATGAAAAGAAACTATTTTTGTCTGGTATCAATTTTTTATTTTTTAGATATTCCTAAGTAAAATTAGGGCTTCCCTGGTGGCTCAGAGGTTAAAGTGTCTGCCTGGAATGCAGGAGACCCGAGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGATATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGAGGGAGGAGCCTGGTAGGCTACAGTCCATGGGTTCACAGAGTCCAACACGACTGAGTGACTTCACTTTCACTTTCAAGTAAAATTAGGAAGCACAGGAAAACATGCACTCTTACATAAAGCAAACTTTTAAGAAGTATATGAGCCAAGAATGATTAAGAGGCTAAGAGGACGCTGATTTTAGCAAGGAGTCATTGATAATATTCAGGAGAGCAATTTTAATGAAATAGGCCAGCTGTATAAAAGCACAGGATTTCAAGCCAAAAAAGTAGGTGCTGCTGATTTCTAGATCAGTTGTCAGATCTGGCTATTTACTAGAATTAACCATACGGCTTTTTAATGGGGATGTAATCGACATAGAACGTTGGTTTTGGTGTAACTGGAGC TCONS_00164527 r 5' 0 TCONS_00164527 r 5' 0 EMBV3_27638 TCTGCCCAGTCATATCCAGAACTGGGTGCAGAAGTATCAGCCACAGAACGTCAAAGAGGC Gene GeneID:100125581|ZNF75D:NM_001105039:2_cdna Constitutive 0 NULL GeneID:100125581 X GENE ZNF75D MGC159653 zinc finger protein 75D EMBV3_28825 GTATCAGCTACCTCGACAGATCCACCAATGCCTTCTACAGCAACTCCCCTAAGTCCCTGA Gene GeneID:789612|LOC789612:NM_001105022:317_cdna Constitutive 0 NULL GeneID:789612 2 GENE LOC789612 NULL hypothetical protein LOC789612 EMBV3_34292 AGAAGAAGCTGCCGCTTTTCCTGAAGTTACTTTGCATTTCCTTTGAAAATTATCGAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37586 TGCACGGAGCGGGGGCTCAGTGAATATACGCTCAACTTTCTTACAGTCTGCCCTCCATAT Gene BVV0102_290061 - 1 EMBV3_33994 GK000018.2:53425730-53432741 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25056 AAGGACCCTTTTGTTTTATGACCTCGCTGTGTCTGGCTCCGTAAACTTCGGTGACGTACC Gene BVV0102_309646 + 0 NULL GK000030.2:108424468-108883914 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16742 CTAGAGAAGGCTCGGAAGGCCCAGGAGAAAATGGAAAAACAAAGAGAGAAGCTGAGGAGG Gene GeneID:539311|PPP1R9A:XM_002686657:92_cdna Constitutive 0 NULL GeneID:539311 4 GENE PPP1R9A MGC137809 protein phosphatase 1, regulatory (inhibitor) subunit 9A EMBV3_01847 GTCTTCTCTCCATAACTATAGCTGATGCAGAAAGTCCAACCAATTTATTCATTTCGACTC Gene GeneID:527679|MBNL2:NM_001099710:52_cdna Constitutive 3 NULL GeneID:527679 12 GENE MBNL2 NULL muscleblind-like 2 (Drosophila) EMBV3_39700 TTGCTCTCTGGAATGATGGGTGTATCGTGGGCTTTATTAGCAAGGAGCGAGAGCGAGCCC Gene GeneID:510814|STAT1:NM_001077900:5_cdna Constitutive 0 NULL GeneID:510814 2 GENE STAT1 NULL signal transducer and activator of transcription 1, 91kDa EMBV3_30600 CCATGGGATCACAGCCCTTTGCCATTCATGCCCATTAAGTATTAGAATCTCTGGCTCAAT Gene BVT0102_327429 + 0 NULL GK000006.2:44669208-44854112 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208191 1 XLOC_126704 NonCoding TCONS_00208191 XLOC_126704 NonCoding NonCoding - 6:44846475-44850201 - TSS155698 3726 2 TCONS_00208191_3 137 0.465915190552872 1 0 0.000622312855150992 0.000749222911940933 0.000705021568186524 0.000481305992419473 0.000273135960130043 2.49606645941449e-05 0.000341382592185673 0.000118142316264205 3.62637013005283e-05 0 1.12149006856088e-07 0 0 0 3.29186856632548e-07 2.36282149796768e-06 0 0 0.000440518827137551 0.000653875239681646 0.000334376837890317 0 0 0 0.000932124558782127 0.000723723572910515 0.000379148837679212 0 1.30290040425599e-06 0 XM_005212209.1 C10H14orf1 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf1 (C10H14orf1), transcript variant X1, mRNA. 0.0 1058 87.73 0.228931830381106 0 noncoding 0 0 0 0 -0.237917838968398 0.295154255504808 0.0529218844172613 0.350954682887227 GCAGAGTACATCATGAGAAACGCTGGACTGGATGAAGCACAAGCTGGAATCAAGATTGCCGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACACTTATGGCAAAAAGCAAAGAAAAACAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAATGTTCAGAAAACTAAGACCATGGCATCTGGTCCCATCACTTCATGGCAAATAGATAAGAAAACAGTGACAGACTTTATTTTGGGGGGCTTCAAAATCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGACACTTGCTCCTTGGAAGAAAAGTTATGACTAACCTAAACAGCTTATTAAAAAGCAGAGACATTACTTTGCCAACATATGTCCATCTAGTCAAAGCTATGGTTTTTCTAGTTAGTCATGTATAGATGTGAAAGTTGGAGTATAAAGAAAGCTGAGCACCTAAGAATTGGTGCTTTTGAGCTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACAGCAAGGAAATCCAACCAGTCAATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGCCTGATGCTGAAGCTGAAGCTCCAATACTTTGGCCACTTGATGCGAAGAACTGACTCACTTGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCGGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCAATGGACATGAGTTTGAGTAAACTCCAGGAGTTGGTGATGGACAGGGAGGTCTGGTGTGCTGCAGTCCATGGGGTAGCAAAGGGCTGGACAAGACTGAGTAACTGAACTTAACTGAACTGCTACACAGCAAAGTGATTCATTTATAGATGTATATGTTCCTTTCCATTATGGTTAATCATAAGATTTGAATACAGTTGTCTATGTAGTACAGTAGGACCTTGCTGCTTATCCATTCCATACATAAAAGCTTTCTTCTGCTAACCCCAACATCCCACTCCATCCCTTCCCCACCTCTACCCCCCTTGGCAACTGTTACTGGCGTATTTCCTGTGACTGTGAGTCTTTCTCTTTTGTAGATAGGTTCATTTGTGTCATAGTTGAAAGTCTCTCAGCCGTGTCCAACTCTTTGTGACCCCACGGACTATAGAGTTGATGGAATTTTCCAGGTGAGAATACTGGAGGGGGTAGTCCTTCCCTTCTCCAGCTGATCTTCCCAACCTAGAAATCGAACCCAGGTCTCCTGCATTGTAGGCAGATTCGTTACCAGCTGAGCCACAAGGGAAGCCCAGATTCCACATATAAGGGATATCATATATTATTTGTCTTTCTCTTTGTGACTTGCTTCACTTAGTATGATAATCTCTAGCTGCATCCATGTTGCCTCAAATGGCATCATTTTGCTTTTTTTGCTCTCTTTGTAATTTTAACTGACGTCACTGAGCTTGGCCACACAGATTAGAAATGTAGCCCAAATATTGCAGTGTTAGAAAGTGAACCCTCTTTCTTCTGCTATTGATTCCAGGTATATGGACACTACCCCAAAAAGGCCAGCCATAAACTTGAATTATGAGTATCTAGTGACTGATTTCCACAGTAATCCTAAGACCTAACTATAGAAAGGTTAGCACTGGAGAGAGAAATTCAGACAAAAACACATGAGAAATTTTAAGAGTGTCCTCTGTCATGAACAGCTGATATTCAAGATAACAACGACTATACCCACAGGAAAAAGAAAGTATTCAGTTGAAAGGTTGTTAGTGATTGTACTTGTAGCTTGTCACATAGCTTTAAAATAGTGTTTTAAAACTTTTAAATAGTGTTGGGAAAACCATAAAGAGCTGTAAAATATTGATTATTTTTATTATCAACTATCTAAGTGGTAATGGTGTACCAACTTCAAAGCAGGGAGGAGGTCTACTTTTTTAAAAAGTTGATTGTCAGTCCTTTTAAATCAAATTGTTTCCCATGGGATCACAGCCCTTTGCCATTCATGCCCATTAAGTATTAGAATCTCTGGCTCAATTTCATAGACATTAGTTATATAGCAATAAACTTTCCAGAAAACACAAACACCCATGTGACACACAACATATACATATACATGCACATATATACACACAGATACATATACACAGGTATATACATACACACATATGCATATGTATATATATACAGGTGACCTTTGGGCAACATGGGTTTGAACTGCTAGGGTCTACTTATACCTACTTGGATTTTTAAATATGATGTAATGTGGAATCACATATATGGAGGGCTAACTGTAAAGTGATTCCCAGATTTTGAGTGTACAGGTTATAGGTGCTCCTAACCCATGTTGTTCAATGATCAACTGTACATATACACATGTACACATGTACATGTGTATAAACACACACATACTCTCACACTCCTGGCAAGAGTGTCTTGCTGTTGCTATAAGGAAATACACAGTTTAATTTTGTCTTACTATATTGCCAGCTAGTCCCTTCTGCTCTTAGTACCTAGTGTGGTTTCTGGCCCATTGGAAGTGTTCAGTGAATGGGAAATGAATGAATGCATTATATACAAGATTTGACTTTAACAAGATGGTGATAACAAAACCACACAAACTTTTTAATCACCTCCAATGGAAAAATGTTTTCTTCTGGGTGTATTTTGTTGGTGGAGGTGTTATATACAGCACAATAGTCAAATAAGTTTTAGGGAACTGGACTTTACCCAAATCTTGGTAGTTACTTCTCTATCCCTCCATTTTCTCATTTATAAGGTAAGAATAATGGTGCACTACCTCATTCTTTACTTTAGGAGGATTTATTAAGAACCTTCACATAAAGAGTCAAGCAAAGTGACAAAAAGATTGTAAGCCCACAATAAATACTAGTTGATACCACCATGGTTACGATAATTATCCTCACTGTTTTAATCACAGCCTGAGTTTTCTGGACTTTCAAATGGAAGATAGATTTTCATATTAGCCTTCTTACTATAGCAGAAAGATTCATCTAATTTGAAAATTAAGATGTTAGAGGAAAGTCTCAGATGTCATCACCTGAGGTGAAATTGTCTTTTTGCTCTCTTTGTAATTTTAACTGACCTCACTGAGCTTGGCCATGTGGATTAGCCAGGTGTGTCACCTGATTCTGAGAAGAGGCACCTCCAAGTTGATCAAATTTCCAAATGGAGATGGTAAAGCTAAGTTTTTAAGAGCATGAGAAAAATCAAATAATGCCTTTAAATCATTCCAATGCCATGAATTTACATGTCCCCATGGTACCTACCAGATATGAATTTTGAGGGGGTTCAAGTTTAACCTTCAAAATGCTGCAAGTCTCTGATGCTCCCTGGCTGCAGGTAGCAACTCTGGGAATGGTAAAACTAAACCAATTAGAAGGGAAAAAATGGGATCTTCTGCAACGCATCATTGGAAGGTGAAGAGTCCTATTTATTGTATACACATGGGGTATCTTTTTATCAATCCGCAAAAATAAAACTGAACATTTCTCTCCAAAACCTGATTAGGGGAGTCTCTAAGAGCATCCCACCAGTCTAACAGTCCAGGCAGTTAACAGGATTTTAGTAACTCTTTCAACCAAAACACCAGGTCTATTAAAGCCAATTGCCTTCTAGCTGACACAGAACCACACTTACATATGGAACCAGCTTTGTAAAGTCCATTCTCTTATTCACAGTTTCACTCCTCACTGTACAATCA TCONS_00205043 TCONS_00205044 TCONS_00205045 TCONS_00205046 TCONS_00205047 TCONS_00205048 TCONS_00205049 TCONS_00205050 TCONS_00205051 . 3' 3912 TCONS_00205043 TCONS_00205044 TCONS_00205045 TCONS_00205046 TCONS_00205047 TCONS_00205048 TCONS_00205049 TCONS_00205050 TCONS_00205051 . 3' 7637 EMBV3_04261 ACTGCCCGACCACTTCCACCTGGACACAACTGGGCCATTCATCTACAACCAAGTCCTGAT Gene GeneID:618235|SEPT3:NM_001076949:213_cdna Constitutive 0 NULL GeneID:618235 5 GENE SEPT3 MGC143057 septin 3 EMBV3_13090 TCCAGAGCTTATGCAACATCCGTTTTTCACCCTACACGAATCCAAAGCGACAGACGTGGC Gene GeneID:286883|MAP2K6:NM_001034045:5_cdna Constitutive 0 NULL GeneID:286883 19 GENE MAP2K6 NULL mitogen-activated protein kinase kinase 6 EMBV3_38634 GGCTCCTTTTCCGAGAGGCTGCTGACTTCGGTAATGCCCAGTGATGTCCGAACACTTGTA Variant GeneID:508874|PFN4:NM_001075377:90_cdna 266^394 1 EMBV3_02607 GeneID:508874 11 GENE PFN4 MGC137440 profilin family, member 4 EMBV3_34842 AGCAAAGTCTTCTCTACCTGCTCAGCCCACTTGACTGTGGTGATAATATTCTACGGAACC Gene GeneID:789943|LOC789943:XM_002689878:11_cdna Constitutive 0 NULL GeneID:789943 8 GENE LOC789943 NULL similar to Olfactory receptor 13C2 (Olfactory receptor OR9-12) EMBV3_38503 AGCTCAGAGGTGTCATGGGTAAGGTTTTCGATCATCCTGTGTTAAAGCTCCCGTCAGACC Gene BVV0102_261556 + 1 EMBV3_25236 GK000030.2:147827072-147944472 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246052 TCONS_00246050 TCONS_00246051 TCONS_00246053 1 XLOC_150889 Coding TCONS_00246053 XLOC_150889 Coding Coding NLGN4Y X:147497063-147828950 j TSS184573 5812 1 TCONS_00246053_5 835 9 0.982515080479442 0.000183043956562874 1.21252314948958e-21 8.61904989171114e-05 5.31168547690144e-24 0.000295981872970088 2.1570323363502e-05 2.3527567631474e-10 3.30105998985192e-05 2.83551050840417e-12 2.76637723524924e-33 4.95277320546498e-79 6.11174505933202e-30 1.12559349365124e-40 2.40958999303609e-100 3.35399291290217e-07 9.13423368023226e-23 1.28794903378076e-20 8.0680174980585e-70 7.94471664970491e-32 1.28044490420026e-46 2.50218524268093e-10 3.23035562278663e-21 2.45035019951281e-71 1.19290472815325e-28 3.62003547540138e-06 0.000448543424599193 0.000354354196629536 1.90087831291481e-12 2.86918178119214e-13 1.06153012358898e-85 XM_005228540.1 NLGN4Y PREDICTED: Bos taurus neuroligin 4, Y-linked-like (NLGN4Y), 0.0 1.041e+04 100.00 0.992601514108741 XM_005274564.1 NLGN4X PREDICTED: Homo sapiens neuroligin 4, X-linked (NLGN4X), transcript 0.0 3355 77.16 0.737783895388851 TCONS_00246053_5 sp|Q8N0W4|NLGNX_HUMAN NLGNX_HUMAN Neuroligin-4, X-linked; 0.0 1661 95.22 0.998802395209581 2 coding 0 0 1 1 -0.177630550781281 0.25878869357487 0.0137366074168948 0.791568080840896 CTTAGACACTAAAAGCCAAAATCCAGAAGCCCGACCATCTCATTTAGAAGATAAACCCGGCCCGGTATCTGCTGGACCTGCTGCCCAGGGCCATTTGGAATGGCTGTGAACACCTCTAGGAAACCCCAGGTCTTCGGTCGTAGAGATGACATTATTTGGAGAAGCTTCCTTGAATCGTTGTCATAGAGTGGAGTAGACCGTTCTTAGCTTCTGCATCGAATATTCTGCTAGAGGGGAGAAATGTGCTGAGATGGAAAAGCAATCAAGTAGATTTTCATGGAGGCATTTTTAAAAGCATCTTCTTAGAAGGACGATGTAATGGCCGCCTGCTGTGCGTCGGCGTTCTTATAAAGGATCACTGTTGCTGGGAGGTGCTGGACTGGCCTGGCATCTTTGGAGCCCTGCAGCGGCGGGAATCCAGTCCGAGGATTAAGGCAGCGCAGCGGTCTTGCGATGGGCGGTCAGGACCACCGCCGGGCTGGCTGTTGATCTTGGGCTCTGTCTATGCCTCATCGGGAGTGGGTCTGCAGGAAGCCCTTCGCCTTTCCCGGCTCTCGGTCTTTGGAAGCCCCTCTGTCTCCCCGAGGGCACCCCCTCCCAACTCCCCTGTCTGGTCTGCTCAGAGTCTCCGCCCCGGACGCCCCACCCACCCAACCCCGGATGTGCACGTGAGCCATGTCGAGACCCCAGGGACTGTTATGGCTTCCGCTGGCCTTCACCCCCGTCTGCGTCATGGTCAACTCCAACGTCCTGCTGTGGATCACCGCCCTGGCCGTCAAGTTCACGGTCATCGACAGCCAGGCCCAGTACCCCGTGGTCAGCACCAACTACGGCAAGATCCGGGGCTTGAGAACGCCGCTGCCCAATGAGATCCTGGGGCCCGTGGAGCAGTACCTGGGGGTCCCTTACGCCTCGCCCCCCACCGGGGAGAGGCGCTTCCAGCCTCCCGAGCCCCCCTCCTCGTGGACCGGGGTCCGCAATGCCACCCAGTTCGCCGCCGTGTGCCCGCAGCACCTGGACGAGAGGTCGCTCCTGCACGACATGCTGCCCGTGTGGTTCACGGCCAACCTGGACACACTGATGACCTACATGCAGGACCAGAATGAAGACTGCCTCTACCTGAACATCTACGTGCCCACGGAGGACGGAGCCAAGTCAAAGAAAAACGCTGATGGTATAACGAGTAATGACGGTGGTGAAGATGAAGACATCCATGATCAGAACAGCAAGAAGCCGGTGATGGTGTACATCCACGGCGGGTCCTACATGGAGGGCACGGGCAACATGATCGACGGCAGCATCCTGGCCAGCTACGGCAACGTCATCGTCATCACGATTAACTACCGGCTGGGGATCCTAGGCTTTCTGAGCACCGGCGATCAGGCGGCCAAGGGCAACTATGGGCTCCTGGACCAGATCCAAGCCTTACGCTGGATCGAGGAGAACGTCGGGGCCTTCGGTGGGGACCCCAAGAGAGTCACCATCTTCGGCTCGGGCGCAGGCGCCTCCTGCGTCAGCCTCTTGACCTTGTCTCACTATTCAGAAGGTCTCTTCCAGAAGGCCATTATCCAGAGTGGGACCGCCTTGTCCAGCTGGGCCGTCAACTACCAGCCCGCCAAGTACACTCGGATCCTGGCAGACAAGGTGGGCTGCAACATGCTGGACACCACAGACATGGTGGAGTGCCTTCGGAACAAGAACTACCGGGAGCTCATCCAGCAGACCATCACGCCGGCCACCTACCACATCTCCTTCGGGCCCGTCATCGACGGGGACGTCATCCCCGACGACCCTCAGATCCTCATGGAGCAGGGCGAGTTCCTCAACTACGACATCATGCTCGGCGTCAACCAGGGCGAGGGGCTCAAGTTCGTGGACGGCATCGTGGACCACGAAGACGGCGTCACGCCCAACGACTTCGACTTCTCCGTGTCCAACTTTGTGGACAACTTGTACGGCTACCCGGAGGGCAAAGACACCCTGCGGGAGACCATCAAGTTCATGTACACGGACTGGGCGGACAAGGAGAACCCCGAGACGCGCCGCAAAACCCTGGTGGCCCTGTTCACGGACCACCAGTGGGTGGCCCCCGCCGTGGCCACCGCTGACCTGCACGCCCAGTACGGCTCGCCCACCTATTTCTATGCCTTCTACCACCACTGCCAAAGCGAGATGAAGCCCAGCTGGGCGGACTCGGCCCACGGCGACGAGGTCCCCTACGTCTTCGGCATCCCCATGATCGGTCCCACCGAGCTCTTCAGCTGCAACTTCTCCAAGAACGACGTGATGCTCAGTGCGGTGGTCATGACGTACTGGACCAACTTCGCCAAGACCGGTGACCCCAATCAGCCTGTTCCACAGGACACCAAGTTCATTCACACAAAACCCAACCGCTTTGAGGAAGTGGCCTGGTCCAAGTATAACCCCAAAGACCAGCTGTATCTGCACATTGGCTTGAAGCCCCGCGTGAGGGATCACTATCGAGCCACGAAAGTCGCCTTCTGGCTGGAACTGGTCCCACACCTGCACAATTTGAATGAGATATTCCAGTACGTGTCTACCACCACCAAGGTGCCCCCTCCGGACATGACGTCCTTCCCCTACGGGACCCGGCGGTCGCCCTCCAAGATCTGGCCCACGACCAAACGCCCGGCCATCACCCCAGCCAACAGCAACCCCAAGCACTCCAAGGACCCTCACAAGACGGGGCCCGAGGACACCACTGTCCTCATCGAGACCAAACGGGATTACTCCACCGAGCTGAGCGTCACCATCGCCGTGGGGGCGTCCCTGCTGTTCCTGAACATCCTGGCCTTTGCCGCCCTCTACTACAAGAAGGACAAGAGACGCCACGAGACCCACCGGCGCCCCAGCCCGCAGAGGAACGCTGCCAATGACATCGCGCACATCCAGAACGAGGAGATCATGTCCCTGCAGATGAAGCAGCTGGACCACGAGTGCGAGTCGCTGCAGGCCCACGACACGCTGAGGCTCACCTGCCCGCCGGACTACACGCTCACGCTCCGCAGGTCTCCCGACGACATCCCACTCATGACCCCCAACACCATCACCATGATCCCCAACACGCTCACGGGCATGCAGCCGCTGCACACATTCAACACCTTCAGCGGAGGCCAGAACAGCACAAACATACCACACGGACACTCCACCACCAGAGTATAGCTCTGCAGTCCCCTCCTTCCCCTCCCCGCCCTCTTGCCACCCCGCCCCCTGCCACGGGAAGAGGGACAAAGAAGCACCATCTCCAAACAAGGAATGTGTTTCATCCCACTGGCTTAAGACACACACACACACACACAAACCCCAAAAGGGCAACCATTGTGTCTTTACAGACCTCCCATGCTGGCATTTCCCGGTACCACGAGATCAACTTTCAACCCGACGAAATGTGAAACGGTATCCATTCGCTGTCACAGTTCTGCTTTTAAGACCCACCACCATCCAAGCCGACTTGAGCGCGACAAGGACGTCCACGAATCAAGGACCTGGGCGTTTCCAACCGTGACCGTAGAAGCTGACACCTTTCTGGAACTCAGCCAGGGACACTAATTCTTTTTTTTTTTTTTTTTAAATCACAGTTGAAAAAAAAAAAATAAAGTTCTTTATGTGCCACACGACAGATGGCTCTCCTTAAGTGAAAAACAAACGAAAAGAGTCTGTGGGCTTTTACCCAGCATACAGAGCAGTAATCCAGAAAAGAAGGAAAAGTAGAATTTTATTATTAAACGAACAGACTATTCAGTTACATACCTAGAGTTTTGTGCAAAGAGATGTTTTGCCAGCCTGAACTATATTTAAGAAACTTTGTAAAAAAAAAAAAACAGAAAGAAAGAAAATGTATATAGCTGTGAGTTTAAACAAAACGGAGAGAAAAAACAAAACAAAAAAAAAACAAGCAAAAAAAAAAAAAAACGCTTTTATTGGTGTTTTCAGTTTGAAAGAGCTTTTAGCAAGGTTGTGCTTTCTTCATTGTGGTCTGTATGTATATAAATCGGTATATACATTAGTCATATCACGTCTGTTCCCTCCAAGACACAGAGGGGCTTTTTCTTCTTAAATCCTTGTGGCCAACAGACACGGGGTTTTCTAAGGCATTTCATTTGTAAGAGGATATGGTTGTCACGCGGCGGACTCTGACCGTCCCTGTGACCGGGCTCTCTCCCCATTTTTTTTTTTTTTTGTTTTTGGGCTGGAAAGTGCATGCGACGGCATTCTTAGAAGACTGTTTTTTTTTTTTTTTTTTTTTTTTAGGCAAACTTTTATTTTTGGGTTGTTAAAGACTTCATGAAGTTGCAACCGCTCCCCCACCCCCCGCAAGAAGGATCCCCAGCGTGGAGTCTATTTAAAAGCTTGTTGACTTAGATACGCATACTCATGCAGAGAAATCGCAGGGCCTGGGAGGGGAGGGTGTGGGGAGCAGAATACAAGTCTCGTTCTGTAGCTGTGGCTCTTTGAATCTGTTAAGGAAGAGTCGCTTCCCACACCCAGGGTCCTGCCAAAAGAGAGAAAGAAAGCTTGTGTTTGGTGGGCCGGCGGTCTGCTGAGTCAATACATCTCTGTGTTCCCCGGCAGCTGCAGAAATACCTGTTCAGCTTAGCTAATCAGATCGAGGGAGGGGGCATGTGTCTTTCCTTTCTGGTAAAAGCAGTCAAGTCCATTATTTATCAGTAAGCGGGGTTTTTTTTGTGGTTGTTGTTGTTTTTGAATTCTTTGGATCATTTATGGGGTAAAACATTACGCTTGTCTGAAATGGTTATCTTTTGTGCATTTTGCGTATCCGTCACTGATCCGGGACTATCACAGACAGGAGACCAAGGAAGGGAGAGAACACTCCAAGGGCTTTGTGTGGGTTTTCCAGGAAGTTAGAGAATGGCTTGACTGTCAAGATAACACACGGAAATATTCAGCCATTCTTCACTGATGAGGTGGGGATGAGAATCTCGGCGCCTCCGACACCAAGTCATTTTCTTATGGTCGTTTTAGCTTTCCTTAAGGGATATCACGCAGGTATCGTTAAGTCGAAGGAAAATCGATAGCAACCACGGTGACTTGAAGTTTTGGCTTTCAAAAACCCATCGCCAAGCCAGGAAATAGTAGCCAAAGATGGGATGTCTTGGGGCGTGGTTATCAGAGCAACTCAGCTAAGGTGCACGTTCTCAAGAAAGACAGTCCAAATTCCTCGTCCCTTGGTACAATCTTTGATTACCGGAACCCCTAGACTAAAACTGTAACAGCACTTCTCCAAAGTCTTTGAAAATGACGGCCCTCCACCCCGCAACCCCCAGAAAAACAGAGTTCTTAGGAAGTCAGTGCAGACCGATCTCCCAGCAAATTCTGCTGTTCATCTTGGTTCAGATTTTAAGAGTGAGTCTGTGTACGTGAAATGTAATCCCAACTTTGCACAGAGTGAAGTGCACACTCCTGCAGCTCAGAGGTGTCATGGGTAAGGTTTTCGATCATCCTGTGTTAAAGCTCCCGTCAGACCATTTCTGCAAGCCATGTATTTATTACCCCAGCTAAGTGACCACAAATAGGCTGTCCAGGAAGTTACAGGGGAAGTGGCACTCGACAGCCGTGTGGGACCGGTCTGTTTGTGATGTGAATTTCAGTATTTGTTTAGTATTTCCAATCGTCTTCTGCTAGCAATATGCACAGTAATGTATCAGGCTTGTGACATTTGGATAAGGAAAAAAAAAAAAGAGTTCTTGTTAAGTGAATAACTTTAGCTTTTACAAAGGGTTATGATCAAAAGCAATTTAATACACCTTAAATGATATCTTATTTCTACATG EMBV3_24186 ACCTAGCGAGTTAAGTGATAGTAGTGAGTGTCTCTGAAAGTAGCAGTAGCTCCAGTGCAC Gene GeneID:532698|LOC532698:NM_001034580:142_cdna Constitutive 0 NULL GeneID:532698 12 GENE LOC532698 MGC128448 hypothetical protein LOC532698 EMBV3_39665 AAGCTACAAACCAAGGTGACTCCCCCTAGATACATATCTTGGTTTACCATGATTCCAGAC Gene GeneID:516375|STRN3:NM_001098042:23_cdna UTR3_Alt 2 NULL GeneID:516375 21 GENE STRN3 MGC151634 striatin, calmodulin binding protein 3 EMBV3_29952 ATGAGCAGAAGCGCATCGAGCGGGAGCTGGCGGAAGCCCAAGAGGATACCATATTGAAGT Gene GeneID:338040|ATP5I:NM_176639:13_cdna Constitutive 0 NULL GeneID:338040 6 GENE ATP5I NULL ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e EMBV3_00969 CATATTCTAGAGATGCGCAGAGGTCCATGGGTGCAGGAATTTGGCATGGAACAGAGGGTC Gene GeneID:539038|SEZ6:NM_001078018:148_cdna Constitutive 0 NULL GeneID:539038 19 GENE SEZ6 MGC142450 seizure related 6 homolog (mouse) EMBV3_12105 CAGAAATATGACAAGATTACAGTGCTGTTGGCTTAAGGTGCAGGGTGCAAAGGGATCGAG Gene GeneID:515731|PLXDC2:NM_001077928:100_cdna Constitutive 2 NULL GeneID:515731 13 GENE PLXDC2 MGC139970 plexin domain containing 2 EMBV3_20836 TCCTTCCTACAGGACATCGTGCAGATGCAGCCTAACAAGGAGGACGGTGACTTCGACGTC Gene GeneID:617116|LOC617116:XM_002691668:427_cdna Constitutive 0 NULL GeneID:617116 11 GENE LOC617116 NULL similar to Uncharacterized protein C9orf117 homolog EMBV3_31297 TCAACGGAGATACAGAGGCAGTATGAAGGCACGAAAGATGACCATGAGGTTCAGAAGACC Gene GeneID:100336731|LOC100336731:XM_002699685:11_cdna Constitutive 0 NULL GeneID:100336731 X GENE LOC100336731 NULL hypothetical protein LOC100336731 EMBV3_25149 CACAATATATGAAACTCAAGTTACTATACTGTATACCATATGCTTACAGAGTGCTGTGTG Gene BVV0102_182143 + 0 NULL GK000030.2:87926873-88410763 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37153 GGGAGGTATCCATGCTGACATGTACTCAGCGTCGTAGTTCTGAGGTTAGTTTGACTTCCG Gene GeneID:509585|CXCR7:NM_001098381:2_cdna Constitutive 0 NULL GeneID:509585 3 GENE CXCR7 NULL chemokine (C-X-C motif) receptor 7 EMBV3_10465 CTAGGGAGCCACTTTCCCATTCTCGGGGCAGACACTGATACCACCTTGTAGAGTCAAAGT Gene GeneID:614800|LOC614800:NM_001076345:49_cdna Constitutive 0 NULL GeneID:614800 7 GENE LOC614800 MGC139807 Leydig cell tumor 10 kDa protein homolog EMBV3_13086 GAGCCAAAGAGTATGTGTTGGGCTTGTGGCAACTTCTTGGACAGTGGGCTTCTTGCATAC Gene GeneID:531304|LOC531304:XM_002690682:281_cdna Constitutive 0 NULL GeneID:531304 10 GENE LOC531304 NULL similar to olfactory receptor Olr1609 EMBV3_10128 TCCTGTTATGTAGTTCAAGTGTTCTGCCTTGACCAATTGAATGAGTTGATTAACTGGGCC Gene GeneID:783831|SELT:NM_001103103:74_cdna Constitutive 2 NULL GeneID:783831 1 GENE SELT MGC151598 selenoprotein T EMBV3_35727 TGTTTGCCCAGTTGCTATATGGCTTCCAACCTGGCTCAACAAAGTCCTCTGGGACCTGCT Gene BVV0102_118030 - 0 NULL GK000003.2:59328142-59377366 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177905 1 XLOC_107678 NonCoding TCONS_00177905 XLOC_107678 NonCoding NonCoding - 3:59354645-59357509 - TSS132664 2864 1 TCONS_00177905_12 110 0.251396648044693 1 0 4.75058356446257e-06 0 4.20049480757188e-05 0 0 0 0 2.06519227561918e-06 1.65296163991297e-05 0 7.99297000335066e-07 0 0 0 0 0.0010051911015391 0.00315158371899564 0.00130535901264148 2.62901020303289e-05 4.01756148542097e-05 0 0.000175325381866886 0.000462866578654662 0.000506334820654263 5.56407145044564e-05 4.92002688177848e-06 4.60303275786798e-05 5.19833295491692e-05 2.88157262442781e-05 1.04962366310856e-05 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 1e-88 333 91.85 0.0803072625698324 0 noncoding 0 0 0 0 -0.225096045710902 0.0998046293077534 -0.0319300991471671 0.503876817814535 TTTCTATTTGAGAGGTTCTGAGCCCGTAACACTGACAAAACGCAGCTTCTTGGTTGTGTGATTTGTCCTTTTGAGAGGACTTCATGCTTGGTTTAATGTTCTTCCCTGATAGTCTTGAAATTCTCTATTTTTTTTAAAGATTTTTTTTTATGTGCACCATCATTAAAGTCTTTATTGAATTTGTTACAATATTGCTTCTGATTTATGTTTTGGTTTTTTGGCCACGAGCCATGTGGGATCTTAGCTCCCCAATCAGGGATTGAACCTGCACCCCCTGCATTGGGAGGCAATGTCTTAACCACTGAACCACGAGGGAAGTCCCACTTCAATATTTTTTGAACATGGGGCCTCACAAGTGATGCAGCAAATTCTGCTGATTGGACTGGGTAACTTAGTGACTAACAATGATTAAAGCATAGCCTTTTAGGAAAAGGCTAGCACTGTAGTTTTTCTTCAAAACAATTGAAATTTAATGAAAGGAAAGAATAAAGCTGAATGGGAATTAGTTTTTAATGGAATTTCGGATGCATCATTTTTTTCAGCCTCTAATTTTGCAAATAAGTGGCTATGGGGTGGCTCCTCATCTCATATCTTGTTTCACAGATTAAACTTCTGTGGTTGGTGATATTGGCTAATATTGTTTCCATGTCACACTGGCATTTTGGAACTGGACTTCTCACCTTGCCCCTTTTCTCTGCACACCCCCTTCTCCCCAGCAATGAAGAGTCTCATTTTCCAAATTTCCACTTCATGTTTTTCCCTTGACAGAGAATCGACTTAAGGTGGTTCTTCTAAACTCAAGCATGTTTGCCCAGTTGCTATATGGCTTCCAACCTGGCTCAACAAAGTCCTCTGGGACCTGCTCCTCCCACTGGATAATCAAGCACTTTCTCCAAGCTCTTTGCAGCCATTTACATTTAGAATGAAAGACGGTCTTTGAATGGGAAGCTGTAGAATTGTTCCGCGTGCTATGTATTGGAGAAAATAACATAATAGCACTGGGAAAACTTCAGGATGAACCAAATCTCAAAATAGACATTCAAGTTGTTAGGGAAAATAATACAACTCATGGCTGTTCTACCAGGGGCTTCTTTACAGCAAATGAGGCTGCAAAACAATGGATGAAATTGATGGCCAGTGTTTTTCTTGCCATCTCTCTGCCAGAGAACCAGGAAGTGAATGAGAAAATAATGGGCACACACAAAACATTTCCATACCAGCTGACGTAACAAGGACAGCAAAACTCTGATTTTCCAAAGACCCCTGGGAGCTATCAGCTGTGGTGGATGGAAGAGACAATTTGTTACCATGATATGTTTCTTAGTTTCTAATGATACATAAATTATCCCATGAGCCATGATACATAGGGTTTAGAGAGAATTTTAAATGAAAGCAATTTTTTCTTCTAGCAGCACTAATTGCCTCGCAGCAGTAACTGACTCATCACCTGCTGCCTGTGGGCTGTGGTCATTACTGTCTCCTGGAGGTTGAGCCGATGTCCCCCAAGAGAAATGTTTGCTTTGACAAAGTGAATTTACATCCTCACTTTGGAGCCTGCCAAGCCAGGTCTACAGAAGGAGAGAGTATTAACAGTGCCTTTCAGACTTATCTTTATGCATTTGTGTCATCCTGCACATGTTATTTATGAAACAGGATGGTGTGTTGGGTTTTCCTGCATGTGTTATCCATGAAACAGGACAGCATATTGGGTCACAGCTCTTGGCTACCTTTGGAGAAAAGTCAGGGAACTGATATCAATGCTTAATTTCCAGCTTGGTGGGGTTTGAAAGGTAGACTTAGATAAGAAACTTGGACACTTCCTAATGACAGGTTAAGCAGGGCAAGTTGATAAGCACCATTAATTTGAAGAAACGTGGATAAGTAACAAATGTCAATGAAAAATGGTGATGCTATTAATGACTAGAATTCAGTACATGCTTGTTGATTTCGAACATTGTGCTGGGAACTACGGATGCAAGAATAAATGACATGATCCCTGCCTTTGTGAAGTGTGGTGTCCAGCAGGAGGAACAGTCATGTACCAAGATAAGACAAGGTCACCCACAGTACTGAATGACAGTGGAATGGCAGTAGCTCCTGACTTCCTGGAGCGTAACTGGAGGCCTTTTCCCATGGACGGAGGAGCCTGGTGGGCCGCAGTCCATGGGGTCGCTAAGACTCGGACAAGACTCAGCGGAAAGACTCACTTTTCACTTTCCTGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCGGGGACGGGGGAGCCTCATGGGCTGCTGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGTAGCAGACAATGCTAGAACTGAGACTTGAATAATATATTTTATTTGACCAGATGGCCATGATGTAGGGTAGGGGTAGGGCTTTCTGGATAAAAGGAATGGCATAGCAATGGCTTAGACAGCTGAAAGAGAACCCAGCCAGTTGGGGAAACTATGTTTTCAGGTGGTCAAAATATAGGTCATTGTTGGGGAAAATTTTAGAAGATGAGACTCAAGCAACAACAAAGGGAACTTTAGACCTGGGAGCTACATGATCGGAAAACATAGAACTGGTAGAACTGGGAAGGATGGATTGGGGTGGTGTGAGATGAGCAAGGAAATCAGTTAAAAAGCTGCTACAATCATCCAAATTAAATTTTTAAAAAGTGATGCCATTATCCCGTAATTAAACTCAAAACAAGCACAATAAGAAGCCTGCTTGAAACTGTCTCTAAGGAATGTACCTCTCTCATATACCTGTTTTGTCTGCCTGCATATGTATATTTTTTGCTTTCTTAAAAGATTTCTCTGCTA TCONS_00170098 TCONS_00170101 TCONS_00170102 TCONS_00170103 TCONS_00170104 TCONS_00170105 . 3' 881 TCONS_00170098 TCONS_00170101 TCONS_00170102 TCONS_00170103 TCONS_00170104 TCONS_00170105 . 3' 3744 EMBV3_32296 CTAGTTCTAAGTCGGGGCACCAAAGAACAGCATCAAAATCACCAAGAAGAACAGCCTCTC Gene BVV0102_127328 + 0 NULL GK000022.2:15345251-15402891 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126191 TCONS_00126198 TCONS_00126200 TCONS_00126201 TCONS_00126190 TCONS_00126197 TCONS_00126192 TCONS_00126199 TCONS_00126202 TCONS_00126196 TCONS_00126193 TCONS_00126194 TCONS_00126195 1 XLOC_077387 Coding TCONS_00126195 XLOC_077387 Coding Coding NKTR 22:15368025-15421371 = TSS94727 7372 1 TCONS_00126195_9 1462 0.0602278893109061 17 0.862123910394601 0.000548645333817576 0.000512936018431433 0.000683567476418607 0.000371709592757462 0.000426639417358536 0.000246314730952917 0.000185091779331432 0.000494480812504692 0.00055501333417176 0.00101803068069509 0.000516565492635251 0.000252038382653933 0.000366885293204478 0.000531077468273599 0.000292254025131452 0.00816385232746562 0.00383764275986544 0.00287799173818489 0.000726813014042477 0.000383363027209106 0.000158972598364731 0.00228072233766956 0.00238498208008271 0.00177543121590201 0.00102058916856842 0.000821833131874656 0.000445730155174781 0.00128152110424075 0.000962449034254997 0.00151281395870547 XM_002696872.3 NKTR PREDICTED: Bos taurus natural killer-tumor recognition sequence (NKTR), transcript variant X1, mRNA. 0.0 1.318e+04 100.00 0.990911557243625 NM_005385.3 NKTR Homo sapiens natural killer-tumor recognition sequence (NKTR), 0.0 7867 84.12 0.97192078133478 TCONS_00126195_9 sp|P30414|NKTR_HUMAN NKTR_HUMAN NK-tumor recognition protein; 0.0 1953 89.56 0.999316005471956 1 coding 0 0 0 0 -0.00310695871159737 0.990983891283544 0.0028205452483778 0.953079109747862 GGGGGGCGGGGGTGGCGGTCCGTTAGTGGCGTTGGCCTCCGGCCGCGGTGGCAGCGCTTTCTCCTCTGTCTACTGGGAGGTCTCAGGCTGGAGGCCAACCAGGTGAAGAGCGCGGCTGCATGTGTGTGCGCACTCCATGGGAGCCGGGAGGCCTGAGCTTTTGCTGCCGCCTCGGTCGCTATGGGGGCGCAGGACCGGCCGCAATGCCACTTCGACATCGAAATCAACCGGGAGCCGGTTGGTCGAATTATGTTTCAGCTCTTTTCAGATATATGTCCAAAAACATGCAAAAACTTCCTTTGCCTATGCTCAGGAGAGAAAGGCCTTGGGAAAACAACTGGAAAGAAGTTATGTTATAAAGGTTCTACATTCCATCGTGTGGTTAAAAACTTTATGATTCAGGGTGGGGACTTCAGTGAAGGTAATGGAAAAGGTGGAGAATCAATTTATGGTGGTTATTTTAAAGATGAAAACTTTATTCTCAAACATGACAGAGCGTTCCTTTTGTCAATGGCAAATCGAGGGAAACATACCAATGGTTCCCAGTTTTTCATTACCACAAAACCTGCTCCACACCTGGATGGGGTGCATGTTGTCTTTGGACTAGTTATTTCTGGTTTTGAAGTGATCGAACAAATTGAAAATCTGAAAACTGATGCTGCAAGTAGACCGTATGCAGATGTACGAGTTATTGACTGCGGGGTGCTTGCCACAAAGTCAGCAAAAGACGTTTTTGAGAAAAAAAGGAAGAAGCCAACTCATTCAGAAGTCTCGGATTCCTCTTCCAATTCCTCATCCTCTTCAGAATCATCCTCAGAAAGTGAAATTGAACATGAGAGAAGCAGAAGAAGGAAACATAAGAGGAGACCGAAAGTTAAACATTCTAAAAAGAGACGAAAGGAAGCAAGCAGTTCAGAAGAGCCAAGAAATAAACATATAATAAGCCCAAAAGGTCATTCTGAGAGGAGTGATACCAATGAAAAAAGATCTGTTGATTCAAATGCCAAAAGGGAAAAGCCTGTGGTCCGCCCAGAAGAGATTCCTCCAGTGCCCGAGAACCGATTTTTACTGAGAAGAGATATGCCTCTTGTCACAGTGGAGCCTGAACCGAAAATTCCTGATGTTACACCCACTGTAAGTGACCAGAAACCATCTGTGTCAAAGTCTGGACGGAAGATTAAAGGAAGGGGCACAATTCGCTATCACACACCTCCAAGATCAAGATCCTGTTCTGAATCAGATGATGATGATAGCAGTGAAACTCCTCCTCACTGGAAAGAAGAAATGCAGAGATTAAGAGCATATAGACCACCTAGTGGAGAAAAATGGAGTAAAGGAGATAAGTTAAGTGATCCCTCTTCAAGCCGATGGGATGAAAGGAGCTTGTCCCAGAGATCCCGATCGTGGTCCTATAATGGGTATTATTCAGATCTGAGTACAGCAAGACACTCTGATGGTCACCATAAAAAACGCAGAAAAGAGAAAAAGGTTAAGCATAAAAAGAAAGCTAAAAAGCAGAAACATTGCAGAAGGCACAAACAGACTAAGAAAAGAAGGATTGTTGTACCGTCTGACATAGAATCCTTAAAATCTTCAACCCGACGAGTGAAATCCTCATGTGATAGAGAAAGGAGATCTCATTCTTCCTCGTCTTCATCTCATCACTCGTCCAAGAGGGATTGGTCTAAATCTGATAAGGATGACCAGAGCTCTTCAACGCATTCCAGCAGAGACTCATACAGATCAAAATCTCACTCGCAGTCTTATTCTAGAGGAAGCTCAAGATCAAGGACTGCCTCAAAATCTTCATCACATTCTCGAAGTAGATCAAAGTCCAGATCTAGTTCTAAGTCGGGGCACCAAAGAACAGCATCAAAATCACCAAGAAGAACAGCCTCTCAGTTAAGTGAAAATAAACCTGTTAAAACAGAACCTTTAAGAGCAACAGTGACACAAAATGAAAATGTTGTAGTACAACCAGTGGTGGCAGAAAATATTCCTGTTATACCACTGAGTGACAGCCCCCCTCCTTCAAGGTGGAAGCCTGGGCAGAAGCCCTGGAAGCCCTCTTATGAACGAATCCAGGAAATGAAAGCTAAAACAACCCATTTGCTGCCCATCCAAAGCACTTATAGTTTAGCAAATATTAAAGAGACTGGTAGTTCATCATCCTACCATAAAAGAGAAAAAAATTCAGAAAGTGATCGTAGTGCTTATTCAAAATACAGTGATAGAAGTTCAGAAAGTTCACCAAGGTCAAGGAGCAGATCTTCTAGGAGTAGATCTTATTCCAGATCATACACAAGGTCTCGAAGTTTAGCTAGTTCACATTCACGGTCTAGGTCTCCCTCATCTAGATCTCATTCACGAAATAAATACAGTGACCATTCACGGTGTAGTAGATCATCTTCATACTCTTCTGTTAGCAGTGATGATGGGAGACGAGCCAAGAGAAAATTTAGATCCAGTGGGAAAAAAAGTTATACCTCAAATAGAAGGCATAGCAGCAGCTCTGAAAAAGCACTTCGTAACAGATATGTCAAAGGCAGAGCCAAGTCTTCATGTCATAGAAAGTACAGTGAAAGCAGATCATCTTTAGATTACTCTTCAGACACTGAACAGTCAAGTGTTCAGGTTACGCAGTCAGCCCAGGAGAAGCAAGTCCAAATGGAAGTGAATAACAAACAAGAGAGAAACAGAGATGAAGACAAATCTAGGCCTGAACGGGAATGCCCTCATTCAAAAAAAAGAACTTTGAAAGAAAATCTTTCTGATCACTTTCGAAATAGCAGTAAGCCCAAAAGGAAGAATTATGCTGGGAGTAAATGGGACTCTGAGTCAAATTCTGAACGAGATGTAACTAAAAACAATAAAAATAGTCCCCGGCCATCTTCTGATAAGGAGGAAGGTGAGGCCACTTCGGATTCTGAGTCAGAGTCTGGTGAAATTCACATCAAAGCCAAACCCACAACTAAGTCTTCAGCAAATACTTTACTGCCTGATGGTAACAGTGCCTGGAAATCAAGCAAACAGCACTCCTCAACCTCTGATTCTGAGGAATTCTATTCCAATTCAGAAAACACTAGAGGAAAGCCACACAAGCATAAACACAGCTCAAAGGAAAATATTAAAAGGGAACACACCAAAAAAGCAAAAGAGAAATTAAAAGGGAAAAAAGATAAAAAGCACAAGACTCCAAAACGAAAACAAGCATTTCACTGGCAGCCTCCACTTGAATTTGGTGAAGAGGAGGAGGAGGAGATTAATGAAAAGCAAGTTACTCAGGAGGCGAAAGAGAAAAAGCAAGTTTCTGAGAACAGTGAAACCATAAAAGAAAATATTCCCCAAACTAAGAAGCCCTGTGAAGACAGCAGCCTTTCAGGTAAACATAGCACAACAGTGTCATCAGATATTGATCAGTCTACTAAAGATGGTGTTAAACTCAGCACTTCTCCTGTAACCGTAAACACTGATGAAAATGTAGTCCGTTCTCCCCCAAACATTCAGCATATTGAAGAGAGCATCCCAAGCGGAGCAGAGGATATGCTACAAGCAGATGACAACATGGAGATTTGCACTCCTGATCGGAGCTCCCCAGGAAAGGCCGAGGGGACTTCCCCTCTAGGAAATTCAAGGCTTGATACCCCAGATATAAGCATTGTTCTAAAGCAGGATATGGCAGCAGAGTATCCTGAGGCAGAGTTGAGAAAACAGGAAAGCAGTATGTCAGAAATCAAAATGTTGGGTGAGATGGGCAAACAGGACAGCGGCTCTGCCAGCTTGACCAGTGCTGTAGAAAGTACTATAAAGAACGAGGTAGCTGAGAAAAGCCAGACGAGCCTCGTGGATAATAAATGGAAGCCCCTGCAAGGTGTGGGGAACCTTGCAGCACCATCTGCTACCACATCCAGTGCTACGGACGTTAAGGCACTGACTGCTATGCCTGAAATGAAACCACAGGGTTTGAGAATAGAAATTAAAAGCAAAAATAAAGTTCGGCCTGGGTCTCTCTTTGATGAAGTAAGAAAGACGGCACGCTTAAACCGGAGGCCAAGAAATCAAGAGAGTTCAAGTGATGAACAGACACCTAGTCGAGATGGTGATAGCCAGTCCAGGAGTCCAAGTAGATCTAGAAGTAAGTCTGAGACCAAATCAAGACACAGAACAAGGTCTGTCTCCTATAGTCACTCAAGAAGTCGATCGAGAAGTTCCACATCATCTTATCGATCAAGAAGCTACTCTAGAAGTCGGAGCAGAGGGTGGTATAGCAGAGGCCGCACAAGGAGCCGGAGCAGTTCCTACCGCAGTTACAAAAGTCATAGGACGTCCAGCAGGAGCAGATCCAGGAGCAGCTCCTATGATCCTCACAGCCGGTCCAGGTCCTACACTTACGATAGCTACTATAGCAGAAGTCGGAGCCGAAGTAGAAGCCAGAGAAGTGACAGTTATCACCGAGGCAGAAGCTACAATAGGCGATCCAGGAGTTGTAGATCTTATGGCTCTGACAGTGAAAGTGACCGAAGTTACTCTCATCACCGAAGTCCCAGTGAAAGCAGCAGATATAGTTGAAAGTGTCCCCTTTTTTTTATATGAATTATATCTTATGTGTAAATACCTGGTAACTTAAAAAATTAAGAAACTTAATGGCAGTCTGTTGTTCTGTTTCAGTATTAGAGATGAATTTAAAAAACAGACACTTCTTAATTGTTATTTGTTTATTTACATGTGCATAGAATTTAAAATACAGATATGTCTCCTTAAAATATTTGTATGCCACATTTTACAGTAGCCAACTATGGAAATTAATTTCTTTTTCTTGAATCAAGAAATCATGAAATTTAAGTATAATTTGCAATATTATTTTAGATAGATGATTTGTCTCATATATTTCTTAGAATACAGATTCTTTTTGCCCATTTTTAAGGTTTTAGCATCTATGCTGCCCAAGCATAGAACTGAAGGAGAACTGTGAAAGGTGGCCAAATACTTCCATACCAATTACACAGTCTTATTCATGTGTGCTCTTAAAAACAAACCACCCAAAACTGATACTGATGGTAACCAGGCAGTGGCTCCTTTCTTCTTTGTTGTTTCAGAGGATCAAGAACGTGGTCATAATACAGCCCACTGTCTTATTTCAGGCTGGCGGGTGAGGTTAAAAAGAATAGATCAGCCTTAACTATAAATATCTGCACTGTCTCTGTAGCCCTAATGTTTCATGTGCTTTTTTAATAAATATTATTAGAAGTTCAGTTTGTTTAAAAAAAAAAAAAAGTTCTATTCCAGTTTATGCTCTGGTGCTTGGTAACTTTTGGTGCATTATTCTTATATATTATACATTAGAATTCCATCAGAGAGAGAGAGAAATTTTTAAAAAGTTCATTGGCACCAAGTAGGGTTCATTGTAAGCTGTATTCACTTTAACTATTTGGAGAGCTTCTCTCAAGCACAGGTGTGGGCTGCGGGCCGTGGAGCAGGCAGGATTGGCACAGGGTTGTGTAACCACTTGGGTATGCTGCCCAGAACTGATGCCTGGAAGAGTTGAATGGAGAGTGGACTTCAAAAGTAACACTAAGATCTACCTGCCACCATTTTGGACACATTTTTCAGGGCTTTACTTTAAAGCCTTTCAAGTAAGAGATGTAAGAGCAGTTGAACGGTCCTTAGCACCCGCCAGCTTGTTCCCTTGTTTCAGTGGCCTGCAGTGATGCAGTGAAACCTTGTGTGAGATGGGTAAGCCTATGACAACAGACAGGAAATCAGGGTGTGCAGTATTGCATAGATTACACATATTCAGTGTCTTGGGTGGTTCCTGTAAAAATGATTTGACCTATAAAAACTGGTGAGATTTTGTGTTTTTTTATCTTCAGTTTGAGCTTTTTCCCCAAGTGTACTTAATCACCTTAGTGCCAGTTTTATCCAGTTATGCAGAAGAAATTCATATTGGATATTTGATGCAGAAGTTTGTGCCATCCTACCCCTTGCCTGCTATACTTGGGAAGTGGGAAAGAACCCCCAGTTGAAGGGATCTAACCACCCCTGATGGATGGAGGGGTGACCTTGGATGTATTACAACCATCACCTATAAAAGGTTCATAAACAGGGTTAAGTGGCCAATTGTTTGCCAAGTTGACAGATGAGAGTACATTAGAAAGTAGGACCTGACTCAAGCAAACACTTGATGGTGAATAAAAAACAATGTGTGATTCATATGAGCATTCTCAAAAGTTGCCTGCAGAGGAGAATATTGCTTTAATAATATTCAGTGGAAAAAAACTGCATTTAGAACTCAAACCAAAACTGCCAAATCTAATTACGTTAAGAAAAGTTACCTTTAGGCAGTGTATTAGTTTTCTATTGCTGTGTAACAGATTATCCCAAACTTAGCAGCTTAAAGCAATACTCATTTCTTAGCTTACAGTTCTGTAGCTCATGAGTCCAGCGTGATACGGCTGGATTCTCTGCTCAGGGTCTCACAAGGCTGAAATCAAGGGTCAGCAGGGTGGCATTCCTTTGTGGAGGCTCTGGGGAAGAAATCTGCTTCCAGGTTAATTCAGGTTGTTGGCAGTATACAGTCCCTTGCTGGCTGTCAGCTGGGGTCCTCTCTCTCGGCTCCTTGAGGCTGCTCGCATTCCTCCTTGTGCGCTTTCCTCCATCTCCAAACCAGCAATGGCCCATCGGGGTCTTCTCATGCTTCAGATCTCTCTGCCTTCCTCCTCTGTTTTAAGGTTCATGTGATTAGATCACGGTTCATGTGTGAGACAGTGTCCCTATATAAGGTCAGCTGTGCCATAGAATGTAGTCACAGAAGTGATATATTTACAGGTATCTGGGCTTGGGGCATGAAAAGAGGGAAGGGCGTTTTAGAATTCTACCTCCCACAGGCAATAACGTTGCAGGTTGTGCTATGGGTAGAATTTTATCCTCAAAAGGTGAGCCCTAGAAGCCTCGTTTGTTTTCTCCATGGAAAAGAACAGCCCTCAGCTGCACCATTCAACTTGTGTGTTTACTGAATGGACTACAGAAATAGCTTTTCTTCCTAAAGGGGATTGTTCTGTATTTTAAATTATTTTTTAATAAAATTGAATTACATCGTGTATTGTGCTTCTTAACAGAAAATGCATTATTGGACTGTTTTTGTAATGTCCTCTTTATTGCAAATGAAACAATATAGCTGGTATTGTTCAAAAACAGTAGAAAATACTTTTGTATATATTGGCAATGTCTAATTTGTATATACTTCATTTAAATTCCCTAAAACTTAAAAGGGAGGCCTTGTAGAAATTAAACTATATACTTAGTCTAAGTTTGAGTCTGAGCATGTTTCATCCTTCTTTATGTACCAAGACTTCAAATAGTCTTTCTGAAATGG EMBV3_23686 GTCTGGTACAGGGTTGTTTCTGTATTGCTCTGTGGGGTCATAAATGGGCTGGGAACCATG Gene BVT0102_170936 + 0 NULL GK000015.2:44460363-44469330 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42953 GTGCCAAAAACTGTGGACATGCTGGCTCAGCATCCTCAGGACCAAGCTGTTGCTTAATTT Gene GeneID:508943|MAP3K3:XM_002696094:147_cdna Constitutive 2 NULL GeneID:508943 19 GENE MAP3K3 NULL mitogen-activated protein kinase kinase kinase 3 EMBV3_31052 AATCGTTGCTCAGGGATCTAGGCGCTGTCTCATTGCAACTGGGTGTGAAGTAGTGTTCAC Gene BVV0102_281327 + 0 NULL GK000003.2:31733086-31745803 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172872 TCONS_00172868 TCONS_00172871 TCONS_00172870 TCONS_00172869 1 XLOC_104230 Coding TCONS_00172871 XLOC_104230 Coding Coding RAP1A 3:31744528-31830678 j TSS128641 2212 1 TCONS_00172871_1 184 10 0.974439633657965 0.00141643856645001 0.000895080089960377 0.00133774630648498 0.00095053560600621 0.00204497188521417 0.0004856323425142 0.0017678217428442 0.00097363080125136 0.00247589958911619 0.00010438753636899 1.11810045105778e-05 1.92802547094187e-08 4.63110176382569e-05 0.000712607733779619 0.000157818666529462 0.00257287837957426 0.00019335307167991 0.00211415491516747 0.00194288061897592 0.00220422163850916 0.00174605635324894 0.00121985104997289 0.00155044113636586 0.00395757679807097 0.00434699154320956 0.00420327969031184 0.00262713717061745 6.05696102643335e-05 2.47902132711286e-05 0.000713491153432676 NM_174448.3 RAP1A Bos taurus RAP1A, member of RAS oncogene family (RAP1A), mRNA. 0.0 2322 100.00 0.581374321880651 NM_001010935.1 RAP1A Homo sapiens RAP1A, member of RAS oncogene family (RAP1A), 0.0 2255 90.83 0.720162748643761 TCONS_00172871_1 sp|P62833|RAP1A_BOVIN RAP1A_BOVIN Ras-related protein Rap-1A; 2e-134 378 100.00 0.994565217391304 4 coding 0 0 0 0 0.402812585292591 0.0970064532966855 -0.106901368446863 0.124773555134361 CTGCTCTCGAGGCCGCTACCGCCGCCGTCGCCGCGTAGAGCCGGAGCAGGAGCCACGGCCGAGAGGAGGGAGGAGGAGGAGGAGGAGGTGGAGGAGGTGCCGGACCGGGGGGGAGAGATCACAACATTTCTGTTGGTTTTAAGAAGTGAAGTCTCTAAAGATTTCAGAAATTTGTGACAGATTATCAGTATTTAAACAGACCACATCATGCGTGAGTACAAGCTAGTGGTCCTTGGTTCAGGAGGCGTGGGGAAGTCTGCTCTGACAGTTCAGTTTGTTCAGGGAATTTTTGTTGAAAAATATGACCCAACGATAGAAGATTCCTACAGAAAGCAAGTTGAAGTAGACTGCCAACAGTGTATGCTCGAAATCCTGGACACAGCGGGAACAGAGCAATTTACAGCAATGAGGGATTTGTATATGAAGAATGGCCAAGGGTTTGCACTAGTATATTCTATTACCGCTCAGTCCACATTTAATGACTTACAAGACCTGAGGGAACAGATTTTACGAGTTAAGGACACAGAAGATGTTCCAATGATTTTGGTTGGCAATAAGTGTGACCTGGAAGACGAGCGAGTAGTTGGCAAAGAACAGGGTCAGAATTTAGCAAGACAGTGGTGTAACTGTGCCTTTTTAGAATCTTCTGCAAAGTCAAAGATCAACGTTAATGAGATATTTTATGACCTGGTCAGACAGATAAATAGAAAAACACCAGTGGAAAAGAAGAAGCCTAAAAAGAAATCGTGTCTGCTGCTTTAGACCCACAGTAAGCAGCAGCTCTGAGCCAGATTACAGGAATGAAGAACTGTTGCCTAATTGGAAAGTGCCAGCATTCCATACTTCAAAAAATAAATCTGAAGAGGCTTCTCCTGTTTTATATATTATGTGAAGAATTTAGATCTTATATTGGTTTGCACAAGTTCCCTGGAGAAAAGAATTGCTCTGTGTATATCTCTTGGAAAATAAGACAATAGTATTTCTCCTTTGCAATAGCAGTTATAACAGATGTGAAAATAAATATACTTGACTCTAATATGATTATACAAAAGAGCATGGATGCATTTCAAATGTTAGATATTGCTACTATAATCAAATGATTTCATATTGACCTTTTTATCATGTTTCCTCCCTGTCAAGCACTAAAAGTTGAACCATTATACTTTATCTGTAATGGTATAGATTATGAAAAAATTTCCCCTCAAACTCATTGCAGCAGATAACTTTTTTGAGTCATTGACTTCATTTTATATTTAAAAAATTATGAAATATCATTCTGTCATTATATTCTAATTAAAATTGTTTGTGCATAATGCTTTGGAAAAATGGGTCTTTTATAGGGAAAAAACTGGGATACTGATTTCTATGGCTTTCAAAGCTGAAATCTATAATAGACTAAACCCACTCTAATATCGCTTCTTGTGTTTTACTGTCAGATTAAATTACAGCTTTTATGGATGATTAAATTTTAGTACATTTTCATTTGGTTTGTGTGTTTTGTTATTGTTTATAGATTTAAGGGCTTTATTTTATAATGACCACATTGTTGTAAATGCAGCAGTAGCTCCTTTCTGACTGGTACCTGCAGAGCACTTGGCTTTAAACCCCTAAAAGTTGGGGCTTAAGTAGATCATGGACCTAGAGTGATATGACTTATGTATGCCATGAAGTAGAGCCAAACAGCTCATTAGCCACTTAAGTACTGGAGAAGGAAAGAAGCTTGGGAAACCCTGTGCCTTGTTACTGAATATCAAGGAGACCAGTCCTAGAAAGTCTAAATCATTGCTCAGGGATCTAGACGCTGTCTCATTGCAACTGGGTGTGAAGTAGTGTTCACGCCTTGCTGAGACTTTCCAGGAGTGTGGTCAGCCCCATCAGTTACTAAATTGACATTTCAAGATCAAATTTCAAATGTAAGTTCTGACCAACCTGAGAAAATGTTAAAATATTGTAAAAAATTTTTTTGGAAATTGTATTCTTTTAAGTTTCTAATAAACTTAGTTACCTAATACTTACCTTCTGCTGATCCAGTTATACATATGTCTGGGACTGAGGGGCCAAAATCTCCTAAATGCAATAAATTTGAAAAATAAGCGAAGCATTAGGGCCGGTCTGTCCAGGTCAGTGTGGCATATTTTAAGGTCCTCTAAAGTCGTTCTTCTTTAAAACACACCTCTCAAACATTCCTTTGGACTTAAAATCATAGACAAAC EMBV3_24086 TTTCATTCGGAGGCAGATTCACCAGTGTAGATGCTATGGCTGCCAGGAGAAGTTCAGGTC Gene GeneID:508663|ZNF277:NM_001083395:36_cdna Constitutive 1 NULL GeneID:508663 4 GENE ZNF277 MGC148780 zinc finger protein 277 EMBV3_01864 CTTCAAGTGATCAGGAAGCAGGATGTGCAGCTCTCTCAACCCAGAAAGACTCTGGTCATG Gene GeneID:539323|DCHS2:XM_002694311:11_cdna Constitutive 0 NULL GeneID:539323 17 GENE DCHS2 NULL dachsous 2 (Drosophila) EMBV3_11518 CGGAAGACAGTTCAGTCCCATCTGAAAAAGGTCGCAAGAGTGGAGCCTGGGACTCCAAGT Variant GeneID:510393|BLNK:NM_001046054:102_cdna 816^887 1 EMBV3_11462 GeneID:510393 26 GENE BLNK MGC127870 B-cell linker EMBV3_14872 AGGAGCCTTCTTTTCCTTCCTGCCTCTGCTGACCTGGTGAATGGGTTGAGTGAGGACAGA Gene GeneID:533355|SCNN1B:NM_001098075:359_cdna Constitutive 0 NULL GeneID:533355 25 GENE SCNN1B NULL sodium channel, nonvoltage-gated 1, beta EMBV3_37215 CCTCATTACCCACCAGAGGATCCACACGGGAGAAAAGCCTTATAAATGCAGAGAGTGTGG Gene GeneID:538651|ZSCAN20:XM_002686492:588_cdna Constitutive 0 NULL GeneID:538651 3 GENE ZSCAN20 NULL zinc finger and SCAN domain containing 20 EMBV3_36907 GCCAATGGGGATTTGCTGTATGGCTCAGGAACGTCAAACTGGGGCTCTATAAGAATCTCG Gene BVT0102_122528 + 1 EMBV3_24081 GK000006.2:101484303-102500169 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09135 TACCCAACCATTATGACGCCCCGGCTGTGCACTCAGCTCTCTATAGGCTCCTGTATCTTT Gene GeneID:514540|LOC514540:XM_002685910:159_cdna Constitutive 0 NULL GeneID:514540 3 GENE LOC514540 NULL similar to olfactory receptor 424 EMBV3_06243 GGAACTAGCTGAATTACTGGAGGAAGAAAAGCTAAGTTGCGTGCCCGTGCTCATCTTTGC Gene GeneID:540040|ARL3:NM_001038567:210_cdna Constitutive 1 NULL GeneID:540040 26 GENE ARL3 MGC133651 ADP-ribosylation factor-like 3 EMBV3_04209 CGTTAGGATGCCCCCTCACGAAGCAGTCAGAAGTGAGAAACGCTTAATGTTAAGGTCAAA Gene GeneID:522442|FANCI:XM_002696567:170_cdna Constitutive 0 NULL GeneID:522442 21 GENE FANCI NULL Fanconi anemia, complementation group I EMBV3_08462 TGGAGAAAGTCTTCCAGAAAACCCACTACCCTGATGTATATGCCCGGGAACAGCTGGCTG Gene GeneID:522085|ALX3:XM_002686149:270_cdna Constitutive 0 NULL GeneID:522085 3 GENE ALX3 NULL ALX homeobox 3 EMBV3_05997 CTAAAATAGACTGATCGAAGCTGCTAACCTGAAGCCTGGGCATGAAGGCGCAACATGACG Gene GeneID:100297243|LOC100297243:XR_083646:743_cdna Constitutive 0 NULL GeneID:100297243 3 PSEUDO LOC100297243 NULL hypothetical protein LOC100297243 EMBV3_25202 TCATGCAAAGATAGGCTCGATAAAGGACAGAAATGGTATTGACCTAACAGAAGCAGAAGG Gene BVT0102_194691 + 1 EMBV3_39189 GK000022.2:47476949-47582814 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234417 TCONS_00250480 TCONS_00250661 TCONS_00201862 TCONS_00116077 TCONS_00040258 TCONS_00116379 TCONS_00152742 TCONS_00106693 TCONS_00018793 TCONS_00108328 TCONS_00100947 TCONS_00153688 TCONS_00233719 TCONS_00023656 TCONS_00238391 TCONS_00200892 TCONS_00024385 TCONS_00056175 TCONS_00007111 TCONS_00111173 TCONS_00083606 TCONS_00126150 TCONS_00154504 TCONS_00178271 TCONS_00253634 TCONS_00126154 TCONS_00136813 TCONS_00166912 TCONS_00240510 TCONS_00092521 TCONS_00249246 TCONS_00091757 TCONS_00185766 TCONS_00032664 TCONS_00006512 TCONS_00221089 TCONS_00115943 TCONS_00066161 TCONS_00137172 TCONS_00252122 TCONS_00062027 TCONS_00124548 TCONS_00098597 TCONS_00252752 TCONS_00187602 TCONS_00036444 TCONS_00062030 TCONS_00010927 TCONS_00229688 TCONS_00249379 TCONS_00250280 TCONS_00254634 TCONS_00244460 TCONS_00175514 TCONS_00107605 TCONS_00238588 TCONS_00113358 TCONS_00126142 TCONS_00250579 TCONS_00036446 TCONS_00250850 TCONS_00110195 TCONS_00032866 TCONS_00187595 TCONS_00239779 TCONS_00010356 TCONS_00124176 TCONS_00243251 TCONS_00222162 TCONS_00241894 TCONS_00200394 TCONS_00250571 TCONS_00008657 TCONS_00087258 TCONS_00189290 TCONS_00229705 TCONS_00187671 TCONS_00007349 TCONS_00231696 TCONS_00039655 TCONS_00150799 TCONS_00238606 TCONS_00232919 TCONS_00209026 TCONS_00066197 TCONS_00200112 TCONS_00214490 TCONS_00113357 TCONS_00122914 TCONS_00064192 TCONS_00153235 TCONS_00010310 TCONS_00085919 TCONS_00162467 TCONS_00241999 TCONS_00208876 TCONS_00251406 TCONS_00221465 TCONS_00058292 TCONS_00219647 TCONS_00007370 TCONS_00124995 TCONS_00252476 TCONS_00223798 TCONS_00201448 TCONS_00083608 TCONS_00078558 TCONS_00161572 TCONS_00031163 TCONS_00065498 TCONS_00033459 TCONS_00241119 TCONS_00049685 TCONS_00200828 TCONS_00009542 TCONS_00233399 TCONS_00122398 TCONS_00254309 TCONS_00007020 TCONS_00086569 TCONS_00007216 TCONS_00023641 TCONS_00047084 TCONS_00250957 TCONS_00167608 TCONS_00011422 TCONS_00253911 TCONS_00219730 TCONS_00056221 TCONS_00179794 TCONS_00062760 TCONS_00190588 TCONS_00122851 TCONS_00009850 TCONS_00181195 TCONS_00116149 TCONS_00064985 TCONS_00164536 TCONS_00251526 TCONS_00123292 TCONS_00040190 TCONS_00066155 TCONS_00065417 TCONS_00030069 TCONS_00130324 TCONS_00129697 TCONS_00156592 TCONS_00098636 TCONS_00063196 TCONS_00142407 TCONS_00023496 TCONS_00162598 TCONS_00199862 TCONS_00085918 TCONS_00062028 TCONS_00186084 TCONS_00224145 TCONS_00106695 TCONS_00197922 TCONS_00113356 TCONS_00220658 TCONS_00130473 TCONS_00104257 TCONS_00175916 TCONS_00074591 TCONS_00190612 TCONS_00059941 TCONS_00249145 TCONS_00109794 TCONS_00126464 TCONS_00092508 TCONS_00073726 TCONS_00089829 TCONS_00198653 TCONS_00022792 TCONS_00142520 TCONS_00064113 TCONS_00203184 TCONS_00220539 TCONS_00168027 TCONS_00089257 TCONS_00042304 TCONS_00025022 TCONS_00175559 TCONS_00201403 TCONS_00090615 TCONS_00112804 TCONS_00083607 TCONS_00142948 TCONS_00249985 TCONS_00147942 TCONS_00020420 TCONS_00207738 TCONS_00010560 TCONS_00152912 TCONS_00010268 TCONS_00161765 TCONS_00123385 TCONS_00143295 TCONS_00249932 TCONS_00108980 TCONS_00234231 TCONS_00180455 TCONS_00185968 TCONS_00179090 TCONS_00008259 TCONS_00040431 TCONS_00037665 TCONS_00089421 TCONS_00131305 TCONS_00062029 TCONS_00160911 TCONS_00038827 TCONS_00064146 TCONS_00021272 TCONS_00218815 TCONS_00059948 TCONS_00111181 TCONS_00019139 TCONS_00091653 TCONS_00113350 TCONS_00090860 TCONS_00141269 TCONS_00126459 TCONS_00197537 TCONS_00240081 TCONS_00126153 TCONS_00221284 TCONS_00250005 TCONS_00131659 TCONS_00021121 TCONS_00113354 TCONS_00238392 TCONS_00019026 TCONS_00233195 TCONS_00253150 TCONS_00248101 TCONS_00036445 TCONS_00047669 TCONS_00232964 TCONS_00164538 TCONS_00110370 TCONS_00078985 TCONS_00030353 TCONS_00228679 TCONS_00039511 TCONS_00250423 TCONS_00238701 TCONS_00219120 TCONS_00025023 TCONS_00091579 TCONS_00113359 TCONS_00126148 TCONS_00161889 TCONS_00071191 TCONS_00066230 TCONS_00113348 TCONS_00106694 TCONS_00098252 TCONS_00177337 TCONS_00251149 TCONS_00087257 TCONS_00248828 TCONS_00168038 TCONS_00030952 TCONS_00231913 TCONS_00107057 TCONS_00007010 TCONS_00110304 244 XLOC_143895 XLOC_153423 XLOC_153604 XLOC_123507 XLOC_070246 XLOC_024074 XLOC_070546 XLOC_092507 XLOC_062871 XLOC_009475 XLOC_064236 XLOC_061189 XLOC_093450 XLOC_143200 XLOC_014323 XLOC_145058 XLOC_122543 XLOC_014494 XLOC_033978 XLOC_002673 XLOC_067073 XLOC_051305 XLOC_077380 XLOC_094264 XLOC_108044 XLOC_156573 XLOC_083024 XLOC_101748 XLOC_147174 XLOC_056910 XLOC_152189 XLOC_056529 XLOC_111819 XLOC_018904 XLOC_002075 XLOC_134405 XLOC_070112 XLOC_040878 XLOC_083382 XLOC_155063 XLOC_037194 XLOC_076094 XLOC_058842 XLOC_155693 XLOC_113647 XLOC_021155 XLOC_006478 XLOC_139182 XLOC_152322 XLOC_153223 XLOC_157566 XLOC_150465 XLOC_105295 XLOC_063515 XLOC_145255 XLOC_069014 XLOC_153522 XLOC_153793 XLOC_066099 XLOC_019102 XLOC_113640 XLOC_146444 XLOC_005907 XLOC_075728 XLOC_149914 XLOC_135471 XLOC_148558 XLOC_122046 XLOC_153514 XLOC_004214 XLOC_052422 XLOC_115329 XLOC_139199 XLOC_113716 XLOC_002910 XLOC_141184 XLOC_023472 XLOC_091954 XLOC_145273 XLOC_142401 XLOC_127537 XLOC_040914 XLOC_121764 XLOC_130693 XLOC_074468 XLOC_038917 XLOC_093000 XLOC_005861 XLOC_051996 XLOC_099348 XLOC_148663 XLOC_127388 XLOC_154347 XLOC_134779 XLOC_036059 XLOC_132966 XLOC_002931 XLOC_076538 XLOC_155417 XLOC_137097 XLOC_123094 XLOC_047446 XLOC_098460 XLOC_017412 XLOC_040217 XLOC_019692 XLOC_147783 XLOC_029816 XLOC_122479 XLOC_005096 XLOC_142881 XLOC_073953 XLOC_157243 XLOC_002582 XLOC_052184 XLOC_002778 XLOC_014308 XLOC_027220 XLOC_153900 XLOC_102444 XLOC_006973 XLOC_156849 XLOC_133049 XLOC_034024 XLOC_109564 XLOC_037487 XLOC_116623 XLOC_074405 XLOC_005403 XLOC_110562 XLOC_070318 XLOC_039709 XLOC_100254 XLOC_154467 XLOC_074846 XLOC_024007 XLOC_040872 XLOC_040136 XLOC_016324 XLOC_079033 XLOC_078410 XLOC_095053 XLOC_058881 XLOC_037923 XLOC_086832 XLOC_014163 XLOC_099479 XLOC_121514 XLOC_112137 XLOC_137441 XLOC_119583 XLOC_133975 XLOC_079182 XLOC_062333 XLOC_105695 XLOC_046345 XLOC_116647 XLOC_036542 XLOC_152088 XLOC_065698 XLOC_077438 XLOC_045488 XLOC_054611 XLOC_120307 XLOC_013462 XLOC_086945 XLOC_038839 XLOC_124124 XLOC_133856 XLOC_102863 XLOC_054042 XLOC_025637 XLOC_014641 XLOC_105340 XLOC_123049 XLOC_055395 XLOC_068699 XLOC_087373 XLOC_152928 XLOC_089827 XLOC_011097 XLOC_126253 XLOC_006111 XLOC_092677 XLOC_005819 XLOC_098652 XLOC_074939 XLOC_087717 XLOC_152875 XLOC_064885 XLOC_143710 XLOC_110222 XLOC_112021 XLOC_108863 XLOC_003817 XLOC_024247 XLOC_021495 XLOC_054206 XLOC_080010 XLOC_097804 XLOC_022648 XLOC_038872 XLOC_011945 XLOC_132134 XLOC_067081 XLOC_009819 XLOC_056426 XLOC_055638 XLOC_085697 XLOC_119198 XLOC_146746 XLOC_134600 XLOC_152948 XLOC_080364 XLOC_011794 XLOC_145059 XLOC_009707 XLOC_142677 XLOC_156091 XLOC_151488 XLOC_027801 XLOC_142446 XLOC_066274 XLOC_047870 XLOC_016606 XLOC_138563 XLOC_023328 XLOC_153366 XLOC_145368 XLOC_132439 XLOC_056353 XLOC_098774 XLOC_042963 XLOC_040944 XLOC_058498 XLOC_107111 XLOC_154092 XLOC_151771 XLOC_102874 XLOC_017202 XLOC_141401 XLOC_062973 XLOC_002572 XLOC_066208 Coding TCONS_00104257 XLOC_062333 NonCoding NonCoding FBXO42 2:136338528-136351002 j TSS77247 7667 8 TCONS_00104257_3 95 0.503978087909221 2 0.38547262086106 1.62675647047826e-09 4.72791655921068e-05 5.41095430154063e-07 7.53892644778029e-06 6.42993227402873e-12 5.08041412984032e-12 2.7756913033248e-05 1.63149439266299e-12 1.47377527222146e-05 0.000455781934410277 0.000113088404229415 0.000255059478107007 1.94126479283834e-05 1.04324549469944e-09 1.09733681969112e-06 0.00844920693708561 0.00677696754610295 0.00902072634545453 3.36501255669755e-06 2.11402331059063e-10 1.52506422460481e-05 0.00263967693155928 0.0031844294093172 0.00329783032633164 1.25002381884987e-11 6.6953718517622e-06 4.2482840732395e-11 0.000190168434213366 0.000161717773693424 0.000348417977422997 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 2192 90.95 0.204251989043955 0 noncoding 0 0 0 0 -0.019669547381754 0.897449265278559 0.00443305697804825 0.954566805921287 CCATCGGACCCCTTAACCAGGTGAAGCAATAAGTCCTTCAGTAAGAAAAATCCGGCTTCCGTCTGCCGTAGTATCTTGTTAACCATATATGGACTGCTTTGAAAACTAGCCAATCAGCTTGTGCCAAGTTTGAATTTTCCGTAACTCCTTCAATTTTGCCCCAAATCGCGGCGCTGGGAGACAGATTTCAGCCGTTTCCTGTCTCCTTGCTGGTCGACCTCGCGACAAAGCTCTCTCTTTTCTCGAAAGCTGGTGCCATAGTATTGGCTTCTATGCGCCCCAGGCAGTGAGCCCTTGCTCGACGAGAATTTTTGGCGATCGCAAACGGACTAAGGCCGTGTGGTCGTCTGGCTGAGGCCCTGTAGCCCCGGGCTGGGTGTAGGTCCTCGCCACAGACCCTGAGTGGACACCTAGACGCGATTTGTCTAGAGGCTCTGCTGTCGGGTTCTTGCTTCCAGCCGCAGAGGCGCTCCAGGCTCCTCCGCGCTCCTTTCATTTTTTTGGGAAACAGCTCCTGGATCTTTTGGACATTCCTTTGCAATGCAGAAGCCCAGGGAATTGGGTCCTCCTGAAACTTGGAATCATTACTTCGTTGAAGATCAACTGCAGCCCAAGTGGATAGACCCTATGAAGTTCTTCTGTTTACACATTCTTCAGTAGAGCTAAAAAGAGTTAAACCTTGGGTATACCACTCCTGAGTAAAAATAGTACCCATTTTTAACCAGCAGCTCCCCGTCCCCTTTACAGTTCTCAAACAGGGCACATTCTTTATGGACGGGAGAAAGTAAGCGTACCAGCCTTCTTAATACTGGTGGGGCCTGGAAACCCATCACTGATTTCTTGACACTTGTGAACCCTTAACTGACCTTAAGTTACTTTTCATATAGAAATAGGACAGCTAAGACTCCACCTGGCCAGGAAGAGATGAGGACATCTTCAAAGTAGACAGCTTCTGCCCAGAAGTCTGGTCCAGGCCTATATAAATAAATATTCAATCACTAAAAATGTTTAAAATAACATGGTTTCAGTTCAGTTCAGTCGCTCAGTTGTGTCCAACTCTTTGCGACCCCATGAACTGCAGCATGCCAGCCTCCCTGTCTATCACCAACTACCGGAGTTTACCCAAACCCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTCTATCATCCCCTTCTCCTCCCACGTTCAATCTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAACTCTTCGCATGAGGTGGGGATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAACACCCAGGACTGGTCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTGAAGAGTCTTCTCCAACACCACAGTTCAAAAGTATCAATTCTTCAGCACTCAGCTTTCTTTATGGTCCAACTGTCATCCATACATGACCACTGGAAAAACCATAACCTTGACTAGACAGACCTTTGTTGGCAAAGTAACGTCTCTGCTTTTTAATGTGCTGTCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGTGTCTTTTAATTTCAGGGCTGCAATCACCATTTGCAGTGATTTTGGAGCCCCCCAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTCCCATGAAGTGATGGGACTGGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTGACTTTTATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTCCCAGCAATCTTGATTCCAGCTTGTGCTTCCTCTAGCCCAGCATTTCTCATGATGTATTGTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGACATACACCTTCCCCTATTTGGAACCAGACTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGGTATTCCCATCTCTTTCAGAATTTTCCACAGTTTCTTGTGATCCACACAGTCAAAGGCTTTGACATAGTCAGTAAAGCAGAAATAGATGTTTTCTTTGTAACTCTCTTGCTTTTTCCATGATCCAGTGGATATTGGCAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAATCCAGCTTGAACATCTGGAAGTTCATAAGTCACATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCGGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCTACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCATCTTTCAGGGTTTGAAATAGCTCCACTGGAATTCCATCACCTCCACTAGCTTTGTTCATGGTGATGCTTCCTAAGGCCCGCTTGACTTCACATTCCAGGATGTCTGGCTCTTGGTGAGTGTGAGTGATCACACCATCACAATTATCTGGGTCGTGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTGTCCTTTATCGAGCCTATCTTTGCATGAAATGTTCCCTTGGTATCTCTAATTTTCTTGAAGAGATCTCTAATCTTTCCCATTCTATTGTTTTCCTCTATTTCTTTGCATTGATTGCTGAGGAAGGCTTTCTTATCTCTCCTTGCTATTTGGAACTCTGCATTCAAATGGGTATATCTTTCTTTTTCTCCTTTCCTTTTCGCTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTCCTCAGATAGCCATTTTACTTTCTTGCATTTCTTTTTCTTGTTTCATGGACTCCTAAATAATAAGGTATGTTTTTGGAGGACTGTTAAAATTAGGAGTCATAGTTCTGTGTATCATAGGGTTAATCTTTTTACTCACCAATTTTTTTACTTATTATCTGTCTCGTGTATTTAAAAAGGCCTCTTCCACTCACATGATGATTGCCTGAGACTTTAGAATTCAAAGCAGGACTTGTGAATGTTTACAATCAAGTGCAAAAACAATTTCATTCCTGTTATAATAATCTATGCTGCTACTCAGCAAGAAGCAGCTATGTAAGAAAAATACGGTCTTTTTGAGTGAAGAAACTTCAAAAAAATGTAAATGAGATATGAGCTTTTAGATAAACTCTATTAAGAATAATTATGCTTTAGGAATGTCTGTCTGAAATAGTCTGTCCAAATTGGGGTACCTTGAATTTCTAAGGGTTGTGCTAAACTAAGTGATGGAAGTTCACTGAATAGCTAGCTCATTTCCAAATAAAGTAAGATTTTGAAACATTTATTACTGTACATTAGTTTCCTCTTACAGAGAAGCTAAAGAAATTTGGGACTGTTAATGAATAAAAATAAGCTAGCGCAAAAACTTGAATTTGGCTTTTCTCTCTGTTAAAAGGACACACTTTCTTCAGATGTTGAACTGCATTTGACAGTAGATCTAAGTTTATTTGCCTCTTAAATTGTCTGTTCTGTATTTGCCTTTGAAATCCCGTATTTTTACTTTGGCTGAGTGAATAGCTATTATTTCACAGTGACCTATAGTCCCATCTGACTGAGTGCTCTAAACCTTTCTGATATTTGTTGACAAAACTTCCTAAATCATTCTGGTGAAGCACTTTTGGCTTCTAGCTAACTTTGCGATGCTTCAGAGGGACCCTGAAACATCCCAAAGGGAGATATTACACTAATTGGGTTCAACTTCCGTGTTGAATTACATGGGAAATATTGTCAAGTGAATAATAAGTCTCTATGGTAAATGTCACTAATACAGATATCCTAGAAACAATTTACATATAAATTCTGATATATTCAGGTAAAATGTTGCCATAATTCTAATTATTATCTTAAAGTGTTGTCACAGCACTAACCAAGTTTCTTTTGAAAATGCTTCCTCTTCAAGAAGATTTATAGAAAGGACTTTTGGATAAATACAAGTTTCTGAACTGGGTAAGAAATTAACGATTCTAGTGGGAAACCTGATGACTGTACAATGGTTAACAAAAGGACTGAATGAATTGGGAAATACGCTTATCACTTTTATGGTTTCTGAAAAATTACTGGTTTGAATCTGTGTTTTCTAGATCTTAGGAAACCTTCCCTTCAAACTAATTATGACTTAACAGTAATTTGGTAAAATGATATTTAATAAACAAATTGAAACATTTACCTTTTTTCTCTATCTGACCCCTTCAGAGATTGGAAACTCTTAGGGTTCCAGTAACTTTATCAGATAAATTAGGAAGATTATCTCACTAACTGGTACAGAAATCTCAGTTTTGGAGACCTTGAGAAAGAGAGGAATTCACTTAGATCTGTTAGGCAAAATCTGTGATAAGCCTTTGGGATGACTTTCCTAGCCCTGAAAGGTTTTATTTTAAAGTTAAGTTTGAGACTCCATAAAAGTTTCAGCAAAGCAAAAAAAGTCTGTGATCAATTATGGTTATATAAATAATCAGGTCAAGTTTATTGAGAATAGACCTATTTTATAAACAAGTCTTAATTTGGTTATATTTGGTAAAAATGAGGGTGATTTTAGGGAGAAAAGGATGTTTCAATGAGTGTTAAATCCCAGTTTGTTAACGAAAGTCTGTATGTACTAAGACTCATTTCCTGAATGGATCTTTGCTGTTAGGGTATTTTAATGTAAAATTTAATTGAATTATTAAAGGACACTCTCAGTTTGTTTCTGAAGCTTAGCTCAATAATCTGTCTTTGGATAAAGATCAGATGCCTCGCGACCTGCCACCAAGACTGGAAAAAGACATAATTTAAGGAACAGTCTCCAACCTGGCTGGAAGGACCTTTTATCAGCTACTCTTAACTGGCTCATGCACAGTGAAATTGAAGGAAAACTGACTCTTGGACTAACTCCCATTTCCAAAGGCCCCTACACTGGACTGGTCTATAAAGAGGACTGGCTGACCTCAAACTCAAATGAAGACGACGCTCAAACAGCAAAGTACACTGTGCTAGGACGAGAAGAAGACGACATCAGAAGCAGACAGCTTGCCCAAGATGCCCGACCTGATTCATAGGATCATTGACAACGTTTTCTTGATTTCTTGGACCTTTGCACATCAATCAAATGTTTTCTATCACAGACATGATTCTATGCTAATTTAAAACTCAATCCAATTGTTGGGTTGTGGCCTAGTACTTCTGTGTTACCTTGGTGGATTTCTCCTCTCCAGGACTCTGATAGGATAGACCCTAGGAAGTTTATTTTAGAAGAGAGTTCAGTCCTGTTCTGTCTATTCATGATATTACTAGATGGGATCCTCTCACTTGGTCAGTTAATAATACCTGCTCTGACCCTGGCTCATAGATTTAAGTGTTTTCTTAGGGTCGTTTAAACTCAGTAACAAGCTAAGTCTCAATCAAAAAAAAAATGTGATCTCTTGTCTACTAAAAGGAAAATTCCCACAATTATGGGATGGATCTATATGCTTAACACCAGGCTATGGTTAAGTTTAAAAGCTCTTTATGTTGGGAACAATTAAATTGTACTAAGAATGATCAACCTAGTATTATTATAAAACTAGGCTGAGTACTTGGTGAACTATGCCTATTATTAACCTTACAGAGAATGATTGATATGAAACTCAGTGGAGTTGTGGTAGTAACTTATAGCCTTGGCACCTACCAGGATGGATAGGAAGGTGTAGCCTGGGACTCCCATGAACTCAAGGTCATATACATAATAAATTAGAGGTAAAAGATTTACAACAGACCATAGACATTGAGACAGGATACGAGGAGACAAATGCCTGGCTGGAATGGATTAAATATTCTGTGCGCACTTGGAATGAGAGCAGCTGTTATGCTTGTGCAGCAGGTAGGCCGGAGTCTCAGTGGTACCACTGCCACTCGATGGACCTCAGATGCTGTGGGCATAGAATGCATGATGCTCCTCTTCAGGACAATATGGCCTGGGGTAGTAAACCCTGCAGGACCTTGTCACTAATGTTCGTGACTGTGAGGGGTCCAGGGCGTAACCCCCAAGGACTGTCAGACCCCCGTTCCGTAATGCAAACTACACCTCGTGCCTCTCTAGGTGGGGGGAGCAGTTAGCATTCTGGGGGAGTGAATCCGGGTGCAGTGAAGTCCAGTCCTTTGAGGGAATGAACAGCCATTCTGCATGAACTATGGCCTGGGAAGACATGTGGTGTTGTGGAGGACCATTGCTTGAGACTCTAGCGGCCAATTGGGGTGGAATTTGCACCCTAGTTCAATTGGCTATCCTTTTCACCCTGGCATTTCGACACTCGGATCCATCTCATAAGCAGACTAACCATAGAGCCAAAAGGAACACTCTTGCCCCGGGTGGGTCATTTGGTCCATATATATTCTATTGGGGTCCCTAGAGGTATTCCGAATGAATCCAAGGCTAGAAACCAAATAGCAGCGAGGTTCGAGTTGGTATTATTCTGGTGGTCCACCATTAATAAAAATGTTGATTGGATGAACTGTATTTACTATAACCAGCAGAGGCTTGTTAACTATACCAGGGATGCTCTAAGGGGAATAGCAAAACAGATGCTACCAGCAACATGGCATGGGGACAACTGAGTGGCCGTAGACATGATTCTGGGCTTCCCTTGTGGCCCAGCTGCTAAAGAATCTGTCTGCAATGCAGGAGACCTGGGTTCGATCCTTGGGTTGGGAAGATGCCCTGGAGAAGGGAAAGGCTACCCACTCTGGTATTCTATCCTAGAGAATTCCATGGACTATATAGTCCATGGGGTCGCAAAGAGTCGGACACGACTGAATGAGTTTCACTTTCAGACCTGATTCTGGCAGAAAAGGGAGGAGTATGTGTTTTGGAGGGTGTCAATGTCGTACTTTCATACCCAACAACACAGCCCCTGAGGGCACAATAACAAGGGCCTTGCAAGGTCTGAACACCTTGGGTAATGAGTCGGCTGAAAACTCAGGGATAGATGACCCATTGTCCAGTTTGATGGAACAGTGGTTTGGGATACAGAGAGGCATCATGATGTCTATCCTGACTACCCGTATTGTCACACTTGAAATACCCAGGTAGGGTGTTGCATCATTCCTTGTGTCAGGAGCCTAGTGCACAGATGAATATTAACAGCTCTCACCAAGCAGTCCACTGCAGCCTATCATATCAACCTTCTATTCCTGGAGGAGTCTGAACATGAAAGTCATTCGATGCTAAGTTTGAGGAAAAGAATAATCGACTATCATAAAAAGGGGGTGGGAATTGTAAGAAAAATACGGTCTTTTCTACCAAAGAAGAAATATTGAAGAAATGGATTCATTTTTTTTTTTTTTTAGAACAGTTAAATAGGAAGGTTATGTATATATATGTGTGTGTATATGTATGTATCTGGTTTGTGCACAGGATTCCTAGGATGGTGACTCATTGTCAGTCGTTTGTTTTCTTACCTTCCTGGTTTCTCTTCCTCATAAGAACAATTTGGCAGGCTACTTTTGTGGGCTTTACCCTGCACACCTGCAAAGAACTAAAGGGCTGGAGAAAAN EMBV3_29201 TCTATCTCCTCCACTCTGACCTCCAATTCCAGCACCTCCATTTATGCAAGGCAAACCCCG Gene BVV0102_148704 - 1 EMBV3_35771 GK000022.2:36932868-37320347 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126778 1 XLOC_077491 Coding TCONS_00126778 XLOC_077491 NonCoding Coding - 22:37100153-37231517 - TSS94986 1164 2 TCONS_00126778_3 100 3 0.991161894901913 0.00100611490254079 0 0.00016238881808175 1.47544588543031e-84 1.70430385438325e-53 5.56813884001784e-05 0.000161821486588326 3.41199866110491e-05 9.11350176131215e-05 0 0 0 1.77747254846166e-09 0 0.000268300678512452 0 0 3.39219689796323e-18 8.19895893311801e-34 1.45535628473831e-05 2.00881332319952e-48 0 0 0 9.37375559058088e-05 6.88719273034217e-66 2.73502505125788e-86 0 0 0 XM_005196446.1 PRICKLE2 PREDICTED: Bos taurus prickle homolog 2 (Drosophila) (PRICKLE2), 4e-102 376 100.00 0.177835051546392 NM_001081146.2 Prickle2 Mus musculus prickle homolog 2 (Drosophila) (Prickle2), transcript 4e-57 226 90.80 0.139175257731959 0 noncoding GGGCCAGGCGTGCGCTGCGGAACCAGCCGGGGGCAGCGAGGCGGAGACAGGCTACCGGCCGCCGAGGGTGCCCGCCCAGGCGACCCGCCCTCGCGGCCGCGGTGCGGACGGACGAACGGACGGCGCTGCGTGCAGGAGGCGCCCGGCCATGTTCAGCCGGAGCTCCCGGAAAAGACTCTCCAGCCGCTCGTTGACCGGACTGGGGCGGATCGAGAGAGGCCAGCCATGTAATGCCTGTGGTGACCAGTGCCCGGGGTTTGCCTTGCATAAATGGAGGTGCTGGAATTGGAGGTCAGAGTAGAGGAGATAGAGGCTTTAGACTCATGGGGCAAGGCTGCCAAGGGCAGATGGCATGTACACTGGAGGAACGCTGTCCGAGACCACTAACGGAGGCAGCCAGGAGGAGTGGCTCCATTCTTTCAAGAAGACCTCCAGTGACTAGGGCAGCTTGGTGCCCCTGGATCACACGGAATACCCATGAAGGAATCCTATCAGAGATACCTGTTATCTATATAATCCAACCATGTCAGTAAGCTTTTCCTACAGTGACACTACATAGCCGGCCACCCCTATCTACAGTGACCTGTGACAACAGTCGTTTCTCCTTGATCATGTCAGTTTCTGTAAGGTGGGCTGGTTTCATGCTTCAAGGCGTGAACTGCACTGTTTGTGAGCCTGTGGTTGACTTCAGATCTACTCCCGTGCGTTTAATCTGGTCCCCATGCTGAAGGGGCAGCAGCTCTCTGGGGAAAGTTTTCCTCATGGCTTTGAATAAAATACAGGAGAATAAACCACTGTATGTCATGCCTGCTAACATCCTAGTGGCTCAGGTGAGTCACATGACCAGGCCTAGCATCCTTGAGGCCGAGGAAGACACTATCTGAGGCAGTATATTCGAGAGGATGAATGTTTTTGAACCATCATCTCATCTGCCACAGGGACCAAGAAATAGGCACACCTCATCTTTACTGTCATTTTCCTTATCCCAAGGACCAGAACAGAACACTCAGCAAAGGGGGTGTCTGTCTGCAGGTCAAGTCCATACTCTTGTCCACCACAAACTGCGGTGACTCCTTTGATGAGGGAAAGAAGGCTGATCTAAGGACAGAAGAGAAGTTTTACAAAGAACAAAAGGCTAAGCCCTCGGAAACCAGAACGAGAGGC TCONS_00126777 TCONS_00126777 s 5' 0 TCONS_00126777 TCONS_00126777 s 5' 0 EMBV3_14816 TGAGCTGCCAGATGGTAAGGTACAGATGCCCACTGCTGAAAGAGTGACTTTGACAAGATG Gene GeneID:514214|CASP1:XM_002692921:39_cdna Constitutive 1 NULL GeneID:514214 15 GENE CASP1 NULL caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) EMBV3_34885 TACATCCTGACCAGGTTAAAACAAACCTCCGTGCTAAAGGCCTAGGAGAAGGAAAGGCGC Gene BVV0101_058403 + 0 NULL GK000030.2:117742162-117874159 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07566 ACTGTGAGAACCAGCCAATGCTTCCCATCGGCTTTACGGTTTCAAGATCCATCCAATGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41257 GCAATGGCCAGATCAAGGGGTCCAATCCAGTCTTCAGGTCCAACGATCCAAGATTATTTG Gene GeneID:539475|LOC539475:XM_002686653:80_cdna UTR3_Alt 2 NULL GeneID:539475 4 GENE LOC539475 NULL hypothetical LOC539475 EMBV3_30928 CCCCCATAACCTACTGATTCCCACCTTTTGATTTCAGCATCTCTTCTACCAGACCCCCAC Gene GeneID:618684|MBP:XM_002697647:38_cdna Constitutive 2 NULL GeneID:618684 24 GENE MBP NULL myelin basic protein EMBV3_22310 GAGCATTGTGGTACCTGAAGACTTGTGTCAGGGGTCGCCATTACTTCTGTAAGGGCAAAG Gene BVV0102_225631 + 0 NULL GK000011.2:37649697-37787987 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01084 TTTACGCCGGCATGGGAATCTCTTCATCACGCTCTTTGCACTGATGTTGACTGCAGGGCT Gene GeneID:517948|PIK3CB:XM_002685047:125_cdna Constitutive 0 NULL GeneID:517948 1 GENE PIK3CB PI3K PI3Kbeta phosphoinositide-3-kinase, catalytic, beta polypeptide EMBV3_20956 ACCTAACTGTAAGTTTGTGTCAACTGGTCGAGATACAGCATGTGTGAAGGCCCTAAGAGA Gene GeneID:767828|SUV420H1:NM_001076551:143_cdna UTR3_Alt 2 NULL GeneID:767828 29 GENE SUV420H1 MGC137299 suppressor of variegation 4-20 homolog 1 (Drosophila) EMBV3_06172 GGATGGGCCCCTTACAGGCCTGGCATCCTAAAATTTTATAGTGGTATGGCTTCACATGAA Gene BVV0101_005126 - 1 EMBV3_32125 GK000011.2:68485439-68495668 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28684 TCCCTCGGTGGACCCCACTACTCATTTGACTTTTAACCTTCATCTGTCCAAGAAGGAGAG Gene GeneID:512976|C19H17ORF81:XM_002695784:295_cdna Constitutive 2 NULL GeneID:512976 19 GENE C19H17ORF81 NULL chromosome 17 open reading frame 81 ortholog EMBV3_27805 TTCGTGGTGGCAACTCTTCAGCAGCTAAAGCCCATCTTTTGAAGAGAGTAAAGACTACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21673 CATCGTGGAGCAGTGCTGTGCCAGCGTCTGCTCGCTCTACCAGCTGGAGAACTACTGTAA Gene GeneID:280829|INS:NM_173926:209_cdna Constitutive 0 NULL GeneID:280829 29 GENE INS MGC159719 insulin EMBV3_01701 AGTGCAGGAGGCAGTGGACTCCATGGTGAAGAGTCTGGAGAGGGAAAATATCTGGAAGAT Gene GeneID:784786|LOC784786:XM_002696877:310_cdna Constitutive 0 NULL GeneID:784786 22 GENE LOC784786 NULL similar to Protein FAM136A EMBV3_43738 GGCTACTAATCACCTATGTCAGGAGTCAGCAAACTGTCCATCAGCCAAATCTGGTTGGCC Gene GeneID:537103|ZNF175:XM_002695231:2_cdna UTR3_Alt 3 NULL GeneID:537103 18 GENE ZNF175 NULL zinc finger protein 175 EMBV3_16016 CACAGAGGACTTGGGCACACCACAAGGATCTCCCAGAGTGTCCTGAGCATCGAAGATTTT Gene GeneID:515017|PDGFRL:NM_001035301:58_cdna Constitutive 0 NULL GeneID:515017 27 GENE PDGFRL MGC137905 platelet-derived growth factor receptor-like EMBV3_04428 TGTGTACGTGCTTGCTAAGTCCATGTGCCTAAAGCCCTGCTCTACAACAAGAGAAGCCAC Gene BVV0102_291813 + 1 EMBV3_16975 GK000018.2:52334545-52357102 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14791 AGCAGAGGCTTTGGGTACCAGCCCCCCAACTACTCGACAGCCTACCTTCCTGGCAGTTAT Gene GeneID:505878|SOX15:XM_002695874:375_cdna Constitutive 0 NULL GeneID:505878 19 GENE SOX15 NULL SRY (sex determining region Y)-box 15 EMBV3_39055 TCATCAAGGAACTCAACGCCCTTGGACGGCCAGATATTCTTGTCATGTGTGGGGGAGTGA Gene GeneID:280871|MUT:NM_173939:189_cdna Constitutive 0 NULL GeneID:280871 23 GENE MUT NULL methylmalonyl Coenzyme A mutase EMBV3_35905 TAGAAATCAAATTTTTACCAAAGCCCACCTGGCCACACAGTCCCAAAGTCCTCCAGGCCT Gene BVV0102_386168 - 1 EMBV3_01017 GK000007.2:14133585-14148743 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05881 TGCAGGCAGGTTGCAGACAAAGTATGAGTGTGATGAAGACGGTGCGGATGCTGACAGAGA Gene GeneID:100336870|LOC100336870:XM_002690208:80_cdna Constitutive 0 NULL GeneID:100336870 9 GENE LOC100336870 NULL 5-nucleotidase-like EMBV3_36304 TCACTGACCTGTTTTATTTACCTCTCCCTTCCATGCCCCTAGTGGTAGCCAGTCTCCTGA Gene BVT0101_061286 - 1 EMBV3_32998 GK000008.2:39940911-40047896 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25667 CTGTCTCTTTCCTTCCTCCACAGGTCCACTTACTTTAGCCCTATCTCATCCAGTTTGCTC Gene GeneID:404103|LOC404103:NM_205786:811_cdna Constitutive 0 NULL GeneID:404103 13 GENE LOC404103 SI spleen trypsin inhibitor EMBV3_43467 ACTGTTGTATGGTGGCAGCTAAGTCCTTATAACTCTAGTATGAAGGCTAAAGACAAAAGG Gene BVV0101_049325 + 0 NULL GK000015.2:18028988-18056258 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33883 TAAGCCCTGCTTTTTGGAACTCACCTCCACACTAAGAAGCTAAGAGACCTCACCAGGGTC Gene GeneID:613888|IRX6:XM_002694784:594_cdna Constitutive 0 NULL GeneID:613888 18 GENE IRX6 NULL iroquois homeobox 6 EMBV3_43442 ACGTCTGACGATCGGGTAGTCACAGTAGAGCAAGGTGAATTGTGGTGTCACTTTATAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39707 AGAGTAACCATGTCTATGCGGAATATTAAAGCTAAGCATACGCCTACAGGCATTAGGCGC Gene BVT0102_240068 + 0 NULL GK000029.2:36971374-36988680 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165047 TCONS_00165046 TCONS_00165048 TCONS_00165049 TCONS_00165045 1 XLOC_100394 Coding TCONS_00165045 XLOC_100394 Coding Coding ZBTB44 29:36983235-37011171 j TSS123360 8851 1 TCONS_00165045_2 615 0.00813467404813015 5 0.683336316448899 1.7562837465251e-05 2.1989427593366e-11 4.34386868955153e-16 2.43098953978779e-19 1.78951360685919e-15 2.23194284278214e-26 1.10586512364034e-10 9.65900572805503e-53 5.91099284981731e-17 1.4943270792947e-18 4.35592569106702e-08 2.39576037758423e-15 6.27755505365375e-12 1.04950035882039e-15 5.51662346826065e-39 0.00102917770383851 0.000100549586478577 0.00111759379072955 2.00589212289957e-25 1.66531347393638e-11 8.02408362593704e-12 1.03985768156398e-67 4.01578002444474e-05 0.000331045877944123 1.78010280970277e-05 3.81357752255975e-11 2.97521931386849e-16 1.16183665752923e-34 5.82148367018733e-05 9.82176797196025e-13 XM_005226869.1 ZBTB44 PREDICTED: Bos taurus zinc finger and BTB domain containing 44 (ZBTB44), transcript variant X2, mRNA. 0.0 1.188e+04 100.00 0.743983730651904 XM_005271521.1 ZBTB44 PREDICTED: Homo sapiens zinc finger and BTB domain containing 44 (ZBTB44), transcript variant X1, mRNA. 0.0 3680 88.20 0.323579256581177 TCONS_00165045_2 sp|Q8NCP5|ZBT44_HUMAN ZBT44_HUMAN Zinc finger and BTB domain-containing protein 44; 0.0 1127 96.81 0.917073170731707 7 coding 0 0 0 0 0.0485016920794084 0.721857564828813 0.020638346923386 0.699056765667165 ATCCTTGAAGAGCATCTATAGAAGAGGAAGGGAAAGATGGGTGTGAAAACATTTACTCATAGCTCCTCTTCCCACAGCCAGGAAATGCTTGGAAAGCTAAATATGCTTCGAAATGATGGACATTTTTGTGATATCACTATTCGTGTCCAGGACAAAATCTTCCGGGCACATAAGGTGGTATTAGCAGCTTGCAGTGATTTCTTTCGCACCAAACTTGTAGGCCAAGCAGAAGATGAGAACAAGAATGTGTTGGATTTGCATCATGTTACAGTGACTGGCTTTATACCCCTTTTAGAGTATGCGTACACAGCTACTCTGTCAATTAACACAGAAAATATCATTGATGTTCTAGCTGCAGCCAGCTATATGCAAATGTTCAGTGTTGCTAGCACCTGCTCAGAGTTCATGAAATCAAGCATTTTATGGAATACACCCAACAGCCAACCAGAAAAGGGTCTGGATGCTGGACAAGAAAATAACTCTAACTGCAATTTTACGTCTCGAGATGGAAGCATTTCTCCAGTGTCTTCAGAGTGCAGTGTGGTAGAAAGAACCATCCCTGTCTGCCGAGAATCACGGAGAAAGCGCAAAAGCTACATTGTTATGTCTCCTGAAAGTCCTGTAAAGTGCAGCACACAAACAAGTTCTCCCCAGGCGTTGAATTCTTCAACTTCCTATTCAGAAAATAGAAATCAACCAGTTGACTCTTCTCTAGCTTTTCCCTGGACTTTTCCTTTTGGAATTGATCGAAGGAATCAGCCTGATAAGGTTAAGCAAGCAGAAAATACCCGGACTTTAGAATTACCTGGCCCATCTGAGACAGGGAGAAGAATGACTGATTATGTGACTTGCGAGAGCACAAAAACTGCCTTGCCTCTGGGTGCCGAGGAAGATGTCCGGGTCAAAGTGGAAAGGCTAAGTGACGAGGAGGTCCATGAGGAAGTATCCCAGCCTGTCAGTGCGTCTCAGAGTTCACTGAGTGATCAGCAGACAGTGCCAGGAAGTGAGCAAGTGCAAGAGGACCTTCTGATTAGTCCCCAGTCTTCCTCCATAGGCTCAGTAGATGAAGGCATCACGGAGGGATTGCCTACGCTTCAGGGCACTTCTAGCACCAGCGCTCACGTAGATGATGATGATCGATTGGAAAATGTTCAGTATCCCTACCAACTCTACATTGCTCCTTCCACCAGCAGCACAGAACGGCCAAGTCCCAATGGTCCAGATAGACCTTTTCAGTGTCCAACGTGTGGGGTGCGATTCACCCGTATTCAGAACCTGAAGCAGCACATGCTGATCCACTCAGGAATTAAACCATTTCAGTGTGACCGCTGTGGGAAAAAGTTCACCAGGGCTTACTCGCTAAAGATGCATCGCCTAAAGCATGAAGGTAAACGCTGTTTCCGGTGCCAGATATGTAGTGCCACTTTCACTTCCTTCGGGGAATATAAACACCACATGAGGGTTTCCCGGCACATTATCCGCAAGCCTCGGATTTACGAGTGCAAAACATGTGGCGCCATGTTCACCAACTCTGGAAATTTAATCGTGCACCTGAGGAGTCTGAACCATGAAGCGTCAGAGCTAGCAAACTACTTCCAGAGCAGTGATTTCCTAGTACCGGACTACTTAAACCAGGAGCAAGAAGAGACCCTTGTTCAATATGATCTTGGAGAACACAGTTTTGAAAGCAACTCTTCTGTTCAAATGCCTGTAATTTCACAGGTCTCCTCGACCCAGAATTGTGAAAGCACTTTTCCCTTGGGGTCTCTTGGGCTGACAGAAAAGGAGGAAGAAATGCCAGAGCAGCCAAAGACCAGTGCTTGTGCCGAGGCAACCAGAGATGACCCCCCAAAATCAGAGCTGTCTTCTATAACTATTGAGTAATTTCATAGTTTGGCTTCATTTTTAATTTTTGGAAAGTGCCTGTGCTTGGTCTTGTACATTTGAATTTAATTTTTTAAGCAAAAAAAAAGGGTTTGGAAAAATCTCCCTTTTTACTTTGTAAGTCCTGCAACTGATGTTTTACTTTTCGTGACTGAGAGATTGCTTCTGTATGTGCACAGTAACATGGTGTTGAAATACAGTAGAAACCCTGAAACTTAAGGAGAGGAAGCAGTTGACGTCACACTTATATCAGTTTCCTCTTCATCATCAGGAGTAGGCTAACAACATACCATTAGGTTGAGAAGAAATCAGATGATTACTGACCTTCCTGAAATGAAAGGGTACACCAGAAACATACTACTAAACAAATTTGGCAAATGGCCTGAATAGATGTTACTCCTATACACAGGACCTTGTACAATCTTCTGTAAAGCCTGTTGTTTCTGGAAATATTTATGGTGAGCTTTCTTAAAAATTATTAGGGTGTGTACTTCTGAAATTCCACGTATTCTTTTTTTTTTTTTTAAGCTTTGTCATTATGATTTTTTATGGTGAAAGTTTGGTATTGGGATAGGTATTCCCTGTACCTTTATAATAGTACTCTCCAAATTATCTTTCTTCTATGAAAGACGGCAGAGAGCCACAGTTGAGAAGAGTCAAGCTGTGCATGAAGAGACCAGGAATGGGGAATATAGTGTGTGAATCTCAGCTTCATAGGAACTCTCATACTGCTTTTCTGGTTAAAATCATTGTTTACCTGGTCTTTGAATGTTAATGCCTGGCTAATGAGGTCATTGCCTAGATCAGTTTATTCTTACCCTGTCAACAGTACTTTCTTTTGCCTATACTTGGCGTGATCCCATAAAAAGGAAATATACTGGAGATGTTCTATATTTTATATATAGGTTTGTGTATTATTGAGGATGTTTTCATTTTGCTGTTTGGACAAAATAAAGAATTCTCTGTTAAGGCTATGTTCTTAACCCAACTAAGATTGTTTACAAAATACCATGTGACAGTGATATATTGTCCTTATTCCAAAATATTTTTAGACATTGCCAAATGTCATATTGAAAGCAGTTAGTATAGTTTTTACAGAATGTAAGCAATAATGTAGAAGAGAAGAGGCTATAAAATGATGATCTGTGACTCAGATCTATTTGGGGGAAAAAATTGTTAAGACTAAAGAAAAACTAAAAACCTTAAGGTAATGAATATTACCTCTTGCTGCTAAAAGAAAATGAAACTTCCTGGTTTATAGTTGAAATACATATGATACTTTAGACTGGAGTATATATTTTACCTGGTGCCGTTAAAGCATCGCTTACCTTGATCCTAAATTTCATGAGTCCATGAACAATGATCTTTTGAGTAACTTTTTTTTCTATGTATATACCCAGAGTTTAATCATTATGAAAACACCTGATTTAGATTAGAAAAAGAAAATACAGTTTCTTATTCAGAACACAAGATCTCAGTTTTGTCTGGGTGCTAGACCTCAATAAAAATTTTTTAAGTTATAGTGATTTGTTTCATTTTTTGATTGGCTCATTCAGTAACTTATCTCTTACAAATGTAAAGAAAGGGAAAGTGAACTCCTTGAAGTTTTTTTTAGGCTAATGTTCTTTTTGTTTTCATATTCTGCTGTTTTTAACTTGTTTCCAAGTCCTTTTCTCACTCAAGAACCTATTGTTTCCTTTTTGCTCCCCAAATAGCTATAGTACCTTAAGGAAAATGAACACATACAGATTATGATTGCCCTCCATCATTTATGCGTCTTTATCAGTAGGTTGAATTACTTTTCTTCAGCAAGACTATATGATACTAATAGCGGTACTGCTGTGTCTCAACTGGAAAGGTCAGGAATTTTTATTTTTAATATTATATAGATTCTTTGGAAACTGTTATGCCTACCAATAGATAAATCTCAAGGTTAATTTTAAAATCTTATATGGACAAGACAAGAGTAAGTGAAATTATCACCAGGAGTCATTGTTGCCCTCAGTTCTAAGAGTTATTTTTTTTAGAATAAGGAAGGAAGAAAAGAAGGAAAGAAAATAGACTTGATGAGAAGATACATCAGAACTTGGAGATTTGTTGATTGAAAGTAATTTAGCATACCCCCTGTCCTGAGAATTGTGTACTGAGAGTCCTGCACAGTTTTGCCCGTTCTGAGGTGTTCTGTGTTCTCAGAATGTAGGATTACCATCACTGGCTATTTTTTCCCAAATGGAAACTTTAGACTTTCATTGGTAATTACAAATTATACGGATTTCCAAGTTTTATGAGACATTTGGACCTACTGTGAAAATGCTTATTGCTGGTTGTCTGTTCCCCACATCTTACCAATACAGGTAACTAATACTTCACATGTGATATAAACAAAGGCCTTTTTTTTCTATTTCAGTGAGGCTCTACATTTTCTTGATACATAGTTTAAGGTTACTTAGCTTATGGGCCTGTTTTAAGAAACTAAGCTGCAAGAAAATAATTGTATATAGTGTGACTTAGATTTATTTAAAATTCATCTAAGAGAAGGATGCCTGGATGTATAATTTTTACCAGAATATATGGAGAAAAAAATACAAAGAGATGAAAACCTGTTACATTGTCTCATCATCAGAAATTACCAGTATAATTGAACATTAAAAAAATTCCAGTTTAGCATAGCATAGCAAAGTAATTAACCTCCAATTAAAATAAATAAATTTATATTTTAAAAAAATAAAAAATAATAAAAATGAATACCGTAGCTATCTTGCTTAAATTAGGCCCCATGAGGTAACTTTGTGATATTTAAAGGGCTTAAATTTTAGGATGCAAGATAAATTGCCTTTTTAAACCAAGGATTTTATATAATAAAAACATTTATTTTCATTTTAAAGCTACCAAATAGGTATGCTATACATACTTCACAGATGAGCAGAGATGTGTGCTCTGGTACTGGGTGTTTGAGCACCTGCAGGCATCCTTTCCACTTTATAAGGCTGTGTTCTAACAGTGAAAGCACTTGGCATGTTAGTGATTGCACTAATTCACAAACAAAAATTTAGTGCTCATTTTTTTTTTTTAAGTTTTCAAGAAAGGGATGCAGATGGAGGTTATCACCCACAAATATATTTAAATGAGTGTTTCTTATTTTGAAAGTAATCTTTAAGTAATTAGCTATCTATTTCATTACATTACCAGTTTTTTAAAGTTCTCAATTTCAGTGAGATAAAGTGTACTAAAATGTTTAAATAGCCTCATTTGTTCTTACATTCTGGCTTACAGAACTTTACATTCTGGTTCCTTGTTATGACACATGCCCTTAGGTTTTAAAAACAAACAAACAAAAAACCCTTCTGTTTTGTTAAAATATGTTACCAAGTGGAAAGAATTATGCAGCACATCTAATGTACTTACTGTTGGTAACTCTGTTACCTTCTGACTACTGAGCCAGCCTCTCCTGATGTATAAATGGTTCCCTGGGGGAGCCTTTGGAAGCCGTATTAACTCTTTCGGTTTTATTTTACCTCTTACTAATTTTTATTCTCATACTTAATCTAAATAGAGGACATTTATCTAGTTCAGTGGCTTTTATTTTGAAGATTCTCAGATCACGGTTTGATTTCTTTCAGCTTTGTAGCCCCTGAGAAATACATTACCTTATAATGTAATGGCAGTGTATGCTAGAATAACCACGTGGAGAGAATTACTACTTGATGAATGAACAATCCTAAAATTATAACTGAAAGGACTTTGAGATTTAAGGAATTGATGAAGAGAACTAGCAAAAATGTGAAGTCATAGCTTTGGAGTATACATCCTAGTGAGGGAGAGTAGTTTTCTAGTTATTAGTATTAATTGGGAGGGGAAAAAATGAGAAAAATTCACATCAGGAAGTGACCCAAAGTTGCTGAAAGATAGTAAATGCTGTTTTCAGTGTAAGTTATTGACAGAAGATGATTTAATTTAGATTTTGAGAGTTAATGAGAGAAGCATATATACAAACTTGATTTTCTGAATCAGAACAGAATGGTGGATGGGTGCTCAATTAGAGTAACCATGTCTATGCGGAATATTAAAGCTAAGCATACGCCTACAGGCATTAGGCGCAGATCATCCAAATTTAAGTTATTCTTCATTTTGTCTATACCCATTTTTATCTTTGTGTCATTTTTGCCTGACAGAATGTTGGTGACATAGGGTATTTTTATTTGGAAAGTCCTCAGCAAGTCTAATTGCCAAAGCAATAATGGTTCACATTAACTATGAAGTGGAATTAATATCCAGGTTCAACTAAGGAGTGGACATACTATGGCTATTTCATTTTTAGATTATAAACATGTTGAGATTTATTAATGGGGAATTAAGCCTATGTCAGATTATGGGATGACTCTTCATGACATTATAGTTGTACTTTAACTTCATACTCAACTAATACACTTCGATATTTATACTACATCATAGTGATTATATTTTTATGATAAAAAAGCAAAAGTTCCATATCTTTACGGATGGTCTCTGCAGAGATGTCAGGCGATGGCGGTGGTAGCATCTCAATTGACAGTATCTGAAAAATGAGACTGCCTTAAAATGTACATGCTACAGAGCTCACTCTGCATATGGTCCAGGCCAGTTCCAACTAACATCAAGGTTTTTATGTACATAATAGTTTACAAAGAATTTAAAGGTTTGGACTATTGGTTGAAAACAAAAACTTAAAAAAAAAAAATTTTTTTTAACTTAAAACTTTTAAATTTCAGTTTGAAGTGCCTCGTTTATAAAAATCAGATTCTTTGATTATTGCCTTTCTCTTTTAAACTGACTTTTTGCTGATTAAACTAAAGCCCTAGGCTCAATCGTGATGATTTATGGATAAAATTGCTGCTTGATGGTGTGAGGGCCTGTCAAGATTTTATTAAATTGTCCTTGTTTTTCCAAATACCAGTCTAACCAAATCCAAATTTCATCATTCAGGTAAGCAGGTTAAAAAATCGTCCTGTGAATGAATGTTCAGATTACCAAAGTACATAGTCTGCTGAGGAAAGGTCAGTTTTCCCTAAATTAATTGTATTCATGGAGGTTGTGTTCAGTTAAAGATGGGCAGCCTTTCGTGCCATTCCTAGAAACACCTGTTTTTCCTAGAAATACTTTTTTTTGTATTTTCTGTAAGAGCTTTCTCTTATTTCAACCATCAGTTTAATTTTCAGGTTGACAAATGCCATGTAAAGTGTCTCATACTGAGAGTGGCCCATTGAGTTATTGAAAGTCACACTGCTGTTCATCGTTCAGGTACCTGAAGTGAATGCCATCAGCTGAATCAGGAGTAAGATTAGTCATTTTCTTCCTTATACAAAGTAATGGCTTCTCGTGCTTATATTTCAAGATATTTTTTAAAAAGACCACAGCCCCTACTAGAGTACAATTTGATCTCAGTTCATGTCCCAATAATATGTTTGATGTTTCTCTTGTTGCTGGTGCCTCCTTTTGCATCAGATAGAGATTGCCTGCCTCTTTGTAGGGCACCCTTGTGGCACCTTATGTCCAGTTGGAAGATGGCGTATGGCTTCGTTTTGTGCCTCTGCTATCTTCTCAAAAGCCATTTTATAAAAATCCTAGGTAGCCTATTTTAATATTTAAATATATATATATTTGTGAGAGATACTTTTAGAACAGACTTTTTTTTACTTTAAAATTCCTGTATTCCCATTTTTAAGAGTAAATTTAAATTTTCCAGGATTTGAACTTTTTCCACAGCAGCATAATGAAAAAGTCAATTTGAGATAATAGAATGTAATTCAGTGATAAAAGAGATTGATGTCTGGTTATAGGAAACAGAAGGGAAGGGGGAAAAAGTTGTTTTGATGTAACAAACGAATTTTTAATAAAAATGTTTTTGTTTTCTGTAATTTTGTATTTACTGCTACAGTAGCTCAATATTTTACAGAGCTGACATATAGATCTGGCTCCATTCAGAAACTGGAGTACTTTCTAGTACAACCAACTGAGGAGGAAGGTGTGTACCACAGTCTTCCAGAAAGGTGACTGGCGGCCCTGTTTAGCTGATGCATGCTTTAAAATGCGCCTGTAGCCCAACATCAAGGAAGTGTGGGAGAAACGTTTATCTTGCTAGTTAATAGCATTATGATTCTTTTGGGGCCCTGGCATTTTGTGAAACCCTTGAGGGAGGGAAGGTGATGCTGGAGAAGAAATGTGAATTAAATTTTGTAGAAGGATGTTTTCATGCTTCTGTCCTCTCCTAGAACCAGAACAGCTTTTGTATCTGTGCCAGGCTCTAGTTCACCAGCTATGTATCCAGTCATCATCTCATTCACATTTGGCTTCACTTGGTGACAGTGGCCATAGCTAAGTTATTTGGCATGTTTGACTTTCAACAGTAACAAAAATGGTTTTGGATTTTATTTCCTAAAAATGTATACGATGTCGAAACTTTACATTTTATATACTAGTATCTGGCTATTAGTATTTTACAGGAACCATAGTTCTTGGTGACTACATATATATATATATATATATTTTTGTGACTTTTTTGTATACTAAGTGCCGTTTCAATGTTACAATCATTTTTAGAGTTATTGTAATCAATGTGAATATCATGTTTTTTCAAATCTGTTCTGAGCCTATAGTGTTTGCTTTGTGAATATATATGTGTATTGTATATATTCTGTATAGTTACATTGTACTGAAATATTAGCTTGTTTGATATAAGGAAAGTATGTATTGAGTACTTTTTGCTAGTTTGGTTGTTTAATCTTTTTTAAAAAGGTTTAATCTTTTTAAAAAGCAAAAACTTTAAACTGGCCTTTATTACATGGTCACAAATAAAGTTGCAGTTAGAAGGGATGGGCAGGGAAAAAGATAGTTTTGGGTGTCTTTGAATAGAAACAAGACTAAGTTTTTAAGTTTTGTTTGGTTCCCTTCCCCCCTTCATTAAAATATCTTATTAATGCTTTATGGAGTA EMBV3_38964 CTCTTTCCCTTTGCCTTTATCTTGTGGATAATTGCAAATTCATACCAATCAGGTATTGTG Gene BVT0102_264784 + 0 NULL GK000022.2:12741654-12767797 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32391 CCTCTGGAGGGATCCAACAGTAGAATAACAGAGGCAGAAGATGGGGTAAGTGAGGTGGAA Gene BVV0102_031771 + 0 NULL GK000030.2:47029866-47470917 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089138 TCONS_00161953 2 XLOC_053924 XLOC_098837 Coding TCONS_00089138 XLOC_053924 NonCoding NonCoding - 18:24154472-24155807 - TSS66484 1335 1 TCONS_00089138_2 74 0.999250936329588 1 0 0 0.000121057846780817 1.38636744930695e-05 6.22033154707054e-06 0.000116072563169779 2.67944023659718e-06 9.10066585304229e-06 0 2.69242569888278e-05 6.47223913542318e-06 0.000299998707854142 9.38507682247413e-06 0 0 0.000505850730856928 0.000263786117842725 0 3.7589349411574e-05 2.95431049333831e-05 1.18510580848518e-05 2.2739535151454e-06 7.93216715921733e-06 2.57698737580754e-06 1.38135432306831e-05 6.48732851681573e-07 9.61887838806967e-05 4.38887776123393e-06 3.74134800356332e-05 3.63641027398061e-06 9.00711356004144e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 5e-63 246 94.34 0.118352059925094 0 noncoding CTTTAAGAACTCAATCTTCAGTACCCATTTTTACTTGGGAGCGAGATTACTGGCTTGACTGCTCTCTCCCCCTTTGGATTCTCCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCTTTCTCTTCTCTACCCAACTCTGTGAATCTCTTTGTGTGTTCCGGACTGTAGAGAACACTGGGGGAACTAATTACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCCCCCTTTATCCTCCTGGCCACCTCTGCTTCCTTCCTCCCTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGACTGTGGAGCACACATAAGGAAGTGATTGCTGGCTAGCTTGCTGTCTCCTCTTTTGATTCCCCCTCTTCTCCTTCTGGTCACCTCTATCTCCCTCCTCCCTCTTCTCTTCTTCATGTAACTCTGTGAAGCTCTCTGGTTGTCCATCACTGTGGAGAAACTTTTCATCTCTAACCTACATGTTTTATCATCAGTGCTGTATAGATGGAGAAGTCATGAAGCTACTGTAAGAATAAGACGTAAAACCAGAGGCAGGAGGCTTAAGTCCAAAGCCTGAGAACACCACAGAACTCCTGACTCCAGGGAACATTAATCGATAGGAGCTCATCAAATGCCTCCATACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCACACAAATTCTCCAGCAACACAGGAACATAGCCCTGAGCTTCAATATACAGGCTGCCCAAAGTCACTCCAAACCCACTGACATCTCATAACTCATTACTGGACACTTCATTGCACTCCGGAGAGAAGAAATCCAGCTCCACTCACCAGAACACCCACACAAGCTTCCCTGACCAGGAAACCTTGACAAGCCACCCATCCAACCCTACCCACAGTGAGGAAACTCCACAATAAAGAGAACTCCACAAACTGCCAGAATACGGAAAGGCCACCCCAAACACAGCAATATAAACAAGATGAAGAGGCAGAGAGATACCCAGCAGGTAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGAAATCTGCCTGATAAAGAATTCTGAATAATGACAGTGAAAATGATCCAAAATCTTGAAAACAAAATGGAGTTACAGATAAATAGCATGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAGATCAAAAACACTCTGGAGGGAACCAACAGTAGAATAACAGAGGCAGAAGATAGGATAAGTGAGGTCGAAG TCONS_00085766 TCONS_00085767 . 3' 7418 TCONS_00085766 TCONS_00085767 . 3' 8752 EMBV3_30719 GCATAAAGGAGAAATAGATAAGACTTCTTATTCCTTGAGGGCACTGTCTCATGCCCTCGG Gene GeneID:533256|UNC5C:XM_002688134:16_cdna Constitutive 2 NULL GeneID:533256 6 GENE UNC5C NULL unc-5 homolog C (C. elegans) EMBV3_24610 GTGACTCATCTGTTTGTTTTGAAGTAAAGCCTCAAATGTGCAGTTAGTTCTCTGTGCTTC Gene BVV0101_009638 + 0 NULL GK000010.2:77292966-77359721 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29103 CCCGGATGTTCCCAAGACCCTCGGCGTGATCTTTGGTATCTCGTGGTTCTTCAGCTGTGT Gene GeneID:100126049|NUDT14:NM_001105652:5_cdna Constitutive 1 NULL GeneID:100126049 21 GENE NUDT14 MGC152213 UGPP nudix (nucleoside diphosphate linked moiety X)-type motif 14 EMBV3_05211 CAACAAGGTGTCTCTAATCCTTGCTGTGAATATTGTACATGCTGTCTGGGCCTCACACTC Gene BVV0101_011146 + 1 EMBV3_31992 GK000002.2:41115609-41361136 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30451 GAATGATGGTTTGTTGTTCTTTCCTAAACTAGTGACCCCTTCAAAGGAGCTGGACTGGCC Gene GeneID:615037|BMP2:NM_001099141:1285_cdna Constitutive 0 NULL GeneID:615037 13 GENE BMP2 MGC159940 bone morphogenetic protein 2 EMBV3_40306 CACCTCAGACTTGGCTGTTCATCAGTGCTGGAGGTCCTGGCATGGTCAGGTGGGGAATAA Gene GeneID:540907|EPHB3:XM_002684850:214_cdna Constitutive 0 NULL GeneID:540907 1 GENE EPHB3 NULL EPH receptor B3 EMBV3_39080 GGTCATTGGGAGGAGACGAAGGTTTGGACATCACACAGGATATGAAACCCCCAAAAAGCC Gene GeneID:523427|GINS1:NM_001083701:1144_cdna UTR3_Alt 2 NULL GeneID:523427 13 GENE GINS1 MGC152152 GINS complex subunit 1 (Psf1 homolog) EMBV3_03834 AGGCAGGGAGGAACAGGAGGGCCTGATCACAAAGAGGAAGAATTTGGGGCAATGGAAACA Gene BVV0101_068689 + 0 NULL GK000029.2:43636776-43648491 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19098 TACTGAGATCTTTGGGCTGAACTGGCCTTCCAACCTTCAGGATTTCTCTTGGCCATGGTC Gene BVV0102_043473 + 0 NULL GK000005.2:97806149-97814578 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192918 TCONS_00192913 1 XLOC_117310 Coding TCONS_00192918 XLOC_117310 Coding Coding DUSP16 5:97741429-97809079 j TSS144273 5374 1 TCONS_00192918_3 643 7 0.920664015728244 0.0005897881964565 0.000434608113529299 0.000998318139167899 0.000417529005643198 0.00152318883124847 0.000130585054676304 0.000322834103646513 0.000233762654026445 0.000726897191465807 0.000598288204049215 1.22695755911356e-09 0.000153034419532367 0.000124256172197853 0.000104348063996715 4.14756820560787e-05 0.00434372709691231 0.00179709424072202 0.00660613180898705 0.00063090802793487 0.00073500899357424 3.81565532726462e-05 0.000312233534294962 0.00099837765499715 0.00218865224229494 0.000399953854715244 0.000313941113124717 0.000148673658465752 0.000254240132510707 0.000138820078238447 0.000199647651368957 XM_002687776.3 DUSP16 PREDICTED: Bos taurus dual specificity phosphatase 16 (DUSP16), 0.0 8787 99.98 0.906959434313361 NM_030640.2 DUSP16 Homo sapiens dual specificity phosphatase 16 (DUSP16), mRNA. 0.0 3898 76.10 0.994603647190175 TCONS_00192918_3 sp|Q9BY84|DUS16_HUMAN DUS16_HUMAN Dual specificity protein phosphatase 16; 0.0 1043 79.91 0.998444790046656 2 coding 1 0 1 1 -0.0979204312687093 0.588131246320836 0.0172793873968438 0.749130877973011 ATTGCCCTCTCCACCATCCAAGCTTTTCAGCCCCGTGGCAAGCTGTTGGAGCGAGGGAACAGAGGTAAAGAATGATGTAATGCACTGGCCGCCCCAAAGCATCTTTTGTTGGAATGGTTATTCCAGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCTTTGTGGACGGAGGCCTTTGCGAGAACACATCAACGGGAAAGAGAAAGAGACATTCACTTGGAGGGCTCTCGCCGAAAATGGGTTTAACTCTGCTCTCGCCAGTCACCACCAGCCTGACCTCATACACTTCAGTACAATGGAGTGGCTGAGCCTTTGAGCACACCACCATTACATCATCGTGGCAAATTAAAGGAAGAGGTGGGAAAAGAGGACTTATTGTTGTCATGGCCCATGAGATGATTGGAACTCAAATTGTTACTGAGAGGCTGGTGGCTCTGCTGGAAAGTGGAACGGAAAAAGTGCTGCTAATTGATAGCCGGCCATTCGTGGAATACAATACGTCGCACATTTTGGAAGCCATTAATATCAACTGCTCCAAGCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTTAATTACGGAGCTCATCCAGCACTCAGCCAAACATAAGGTCGACCTTGACTGCAGTCAGAAGGTTGTCGTGTATGATCAGAGCTCCCAGGATGTGGCCTCTCTGGCTTCAGACTGTTTTCTCACTGTCCTCCTGGGTAAACTGGAGAAGAGCTTCAGCTCTGTGCACCTGCTCGCAGGTGGGTTTGCCGAGTTCTCCCGCTGTTTCCCTGGCCTCTGTGAAGGAAAGTCCACCCTAGTCCCCACCTGCATCTCTCAGCCTTGCTTACCTGTTGCCAACATCGGGCCAACCCGAATTCTGCCCAATCTCTATCTTGGCTGCCAGCGAGATGTCCTCAACAAGGAGCTGATGCAACAGAATGGGATTGGTTATGTTTTAAATGCCAGCAATACCTGCCCCAAGCCTGACTTTATCCCCGAATCTCATTTCCTGAGAGTGCCTGTGAATGATAGCTTTTGTGAGAAAATTTTGCCGTGGTTGGACAAATCAGTGGATTTTATTGAGAAAGCAAAAGCCTCCAATGGATGTGTTCTCGTGCACTGCTTGGCGGGGATCTCCCGCTCCGCCACCATCGCCATCGCCTACATCATGAAGAGGATGGATATGTCCTTGGATGAAGCTTACAGATTTGTGAAAGAAAAAAGACCTACTATATCTCCCAACTTCAATTTCCTGGGCCAGCTCCTAGACTACGAGAAGAGGATTAAGAGCCAGACTGGGGCCGCTGGGCCCAAGAGCAAACTGAAGCTGCTGCCCCTGGAGAAGCCAAGCGAGTCAGTCGCCGGGCCCGGCCCCGTGGAGGGCGCACAGGGGAGCCAGCTGCCCCCGGGGCCGCCCCACGGCCGCCCGGCTCCCGCTCTCTCCGAGGGGGCGGGGCCCCGGCCTGCGCCCCCCAGCACGGCCCCCGACGACGGCCCCCTGGTCCAGGCACTCAACGGGCTCCACCTGCCCCCAGACAGGCTGGAGGACAGCGGCCGCCTCAAGCGCTCCTTCTCGCTGGACATCAAGTCGGTGACCCCGACGCCCGGCGGTCTCTCATCCCCCGAGGCCGCCCTGGAGCTCTACAAGCCCGCCGCCTCCAGCCTGGAAGGCGCGGGCAAGCCCTGCCAGTTCTCTCCGGTGCAGGAGGTGTCGGAGCAGACGCCGGAGGCCAGCCCGGACAGTGAGGAGGCCCCGCCGCCCCGGCCCTCTGACGGCAGCGGCCAGGGTGCGCGGCCCCGGCCGGGGAGGCCCCTGTGGTCGCCCCTGCACCGCAGCGGGAGCGTGGAGGACCGCGGGCAGCCCCGCTTCCTCTTCGGCCTCTCGGCCAGCCAGCAGCACCTGGCCACTTCGGCCACGGGGCTGGGCCTGGAGGGCTGGCACTCGGATCTCCTGGCCCCCCAGACCTCCGCCCCGGCCCTGACCAAGAGCTGGTATTTTGCGCCAGAGCCCCCGCACTTCTACTCGGCCTCGGCCATCTACGGGGGCCGCACGGGCCACCCTGCCTTCAGCTGCAGTCAGCTGCCCACGTGCAGCGGGGACCCCGGGCATTCGGTGCGCCGGCGCCACAAGCCCGGCGACAGGGCCGACTCCCGGCGCAGCTGGCACGAGGAGAGCCCCTTCGAGAAGCAGTTCAAGCGTCGAAGCTGCCAGATGGAGTTCGGTGAGAGCATCAGGTCCGAGAACCGGTCGCGGGAGGAACTGGGCAAGGTGGGCAGCCAGTCAAGCTTTTCAGGCAGCATGGAAATCATCGAGGTCTCCTGAGCAGGAGGACACTTGTGACTCCCGTGGACAGGGCTTGTCTTGTTCACGAAAACTAATTCCCTGTAAATCTGAAATATATATATGTACATATATATTTTTGGAAAATGGAGCTATGGTGTAAAAACAACACATGGATCCACACCATTCTTTTGTAACATCTGCAGTTGAGAGAGCAGCTAATACTTCTCTCAATACAAATGGAAGGGCCCAGGCCAGCTTTCCCCCAGACACGTGACACAGTTCTATGCAATGGATTGCACATCCTCCCGTTCGTACTAGATTGAGTTCTACTTGGAGTTGGAGGACGGAAGCCCCCTCCGTTCTCTTGTTGTGCTACAAAGAGATCTCAGATCCTAGTCCTGTCTGGTCCCTTCCGTAGTGCACCTTAGCGCTGAGACTGAGCCAGCCTGTGGGTCGGGCGGGGAGACCCCGTTAGGAACAAAACCTAATGGTAAATCCACAAGGAACCATCATGTCCAAAGCTGATGCACAGATCCAAGCGCACCCGCCAGCCGCTGAGCTGGCCAGCGTCATTCTGCTGACCGACCATTAGGGGGCCTTGCCAAGACCTACTTTAGAGCAACCCCAGTACCTCAGACAAAGTCGGGGCTTTCACCACTACCAGGTCTGGTGGCCCGGTTTCTAGGCATTGTGAACAGGTAGGTAGCTAGTCACACTTTTTCACCAATTCAGACGGCCTCTGCAGGCATTTCCAGTTAGGCCTGGATGGAAGTGGTCCGGCTCCTCTTCTCGGCTTTGTGAAGAAGGAAGGTGAAGCTATCTGAGATCAACTGAACAGCCAGGAATCTGGCAGCATCATGATTAAGCTAATGTTGGGAGGCTAAATGAGTCTACCTCCCTCTTTCTAAATCAAAAGAACTGTTCAAGATGGGCTTGTTAATCTTGGGAACTAACCTGGTTTCAAGCCAGATGTGAATTTATTTGGTAGCAGAGCAGCACCCCCTTCAAGGTCTCAGCCATGCTAGGTATTTTCTATTTTGGTTTCACTGCACAGAGGTATTTTGTGAAAATGGAACAATAAAGTGGAATTTTATTGCAAACTACCAAGAGGCAGAAAACTGTGGAAGGATAAGAAGATCAAACTACTGAGGAGCAGCAGGCAGCTGTTATTTTCTCAGTGGGTTTTTTTTCCCCCTTAGCATGTGATGAAGGTGGTATTTTCTACGATTTCCTTAGGCTTTCATACTGCTAGGGCTGAGAGGCTTTCGTAAGCCAGGAATGCTCAGAACTAAACAGTATAGAAAGGTGAGGAGGAGGCGGACAAATTTTGTTTCATCGCAAACAGAATGGAAAGACACACCCACACTATTCTCAAACTACCCCCGGCATTTTTTAGTAGAAGGGACACCAAAATGGAGCGGGACCAAGTGGTCTCAGTCCGTACCTACAATCACTGTATGGAATCAACCCTGGCAGCTGAAACTAGGTGATTAGAACAAGTAAACAGTGATAGTACTTACCTGCTTTTAAATTTCCTGGCTTGAGTTTTGTCAGCTACAGTCTGGTCCTGTTTTGAAGCCTTAATTCACGTCAGCAGCTTTTTTTTTTTTTTCCAAGGGTGGTGGGTGGGTGTTCGTGTTGTTCTTTACTGTAAGTGTAGCTAGTTGCTGACTCATATCTCAGGTTTTTCTACGTGTGAGAAATGGACAGTCCTTTGAGTCGGATGTGACTTCATGTTTCTTACGGTGACTGCTAAAACCAGCATAGAATGACATGATTCAAAACTGACTTGATCGTGACAATTCTGAGCTTCATAGAACATAACTGGTTATGCACAAATAATGGGCTGTGATCTGGGTGTAAAATGGAGTGAGTAAACTGTAGGGAGTGCATTGTTACCATACTGGAAAGGTTCTGCTAAGTTTAGCTTTTCTCTGTACATGCAAATTCTGGGTGTAATCAGACCCAATTATCAAGGTTTCACACATTGATTTTTGATGTGTTATGTACACACGCACCAACCGTGTAACAGCTCCCAGCTTCCAGAGTCTGGTCACAACTGTGGAACATTTTTGAGACGTGAAAGCAGTGGCTCCAGTGCTGTATGTTTCAGGAAGGTTGTGGGATTTGGTTTTACTGAGATCTTTGGGCTGAACTGGCCTTCCAACCTTCAGGATTTCTCTTGGCCATGGTCCCCTTCCTTCCTGTGACCAGTGTGGTCCTGTGCTACAGCTTTTAGTTCTTGGTCACTAATGTCAAATAATCTGGAGACTTCCCAGCTGAGGAGCCAGCCCTGGAGCCACATGGGTGTCCATGGCCCCGGGTGGCTGGTTCTCTGCACCGTGAATCGGAGGGGGAGCGCTGGAGCCTACCAGATGATACAGAATGGTGATATTAAACAGCAGAACTAGACTTCGATGTGAGAAATGCTGGAAAATGGTTTAGGACATTTGTAAAGTTGGGTGGGAAGATGTACAAATGTTTAATATGAATATAGTGTTCTTTTGGAGTAAGGCAAGCTGTTGAATGGTTACAATTGTGCATTTCTCATTCTGATGTGTCATGAATGTTAATATGATGAAATAAAATCAAAACTGGTACCTGTTTATACATAAACATGAGAAGGGACTTCTCTCTGTAGCACGTCCAAGGGGTTAGGGAGGCCATAGTGGAGCCTGGCCTGCTGGCCTCCCATCAGAGGGTTCAGCTCAAGGTGAAATGCTGAGTCTTCAGCCTGTGTCACAGGCTCCACCTTGGACAGGGAACGCGTGTCAGAGCTAACAGTCTACTGCCGTCATCTTCATCCTTTCATGGGTACATCAGATGCACACTATGGCATAGAAACCTCAAAGGTAAACATTTGCTGACTGGCTGAATCCAGAATGGTGCAGGGTAGGAAGAAAAAAGACAAACATTCATGGTGCATTTTGTACACTTTTAGAATTCTTGTAGGAAAAACCAAGGGAAAGTAGTTATTTCAAGATCTGTTCTCCATCCTTGTCATGCACGTCCTAATAACCTCTCTGCTGCTACGTGATGACACCAGGCACGACGACTCATGAGACAAGAAGCTCAACCTCATAAGGTTGTTAGGCAC EMBV3_36928 CTTTGAGCCTTCGAAACGGTGAAGTCGAGGTCTAAGTTTTCTGCTGCTCTCTGGGAGGCA Gene GeneID:507051|CSTF1:NM_001077865:910_cdna UTR3_Alt 2 NULL GeneID:507051 13 GENE CSTF1 MGC142355 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa EMBV3_06745 GAACCAATCCAACTGTGTGTCCCCATCCGCAGCTCAGAAGTAGAAAGGGTTTCAGTTTGC Gene GeneID:508508|NAP1L5:NM_001077878:159_cdna UTR3_Alt 1 NULL GeneID:508508 6 GENE NAP1L5 NULL nucleosome assembly protein 1-like 5 EMBV3_30499 ATTGAATGCACCTCCTCACGGCAGGCCTCCACACGGGTCCTACAATAAAGCTGATGTTAA Gene GeneID:614818|C5H12orf50:NM_001038203:41_cdna Constitutive 1 NULL GeneID:614818 5 GENE C5H12orf50 C12orf50 MGC134438 chromosome 12 open reading frame 50 ortholog EMBV3_35268 TCTGTGATATGTGGAGAGAAGTTGCTCCTGTTAATTTGACTCCATCCCTGGCTTTGCCCC Gene BVT0102_009284 + 0 NULL GK000009.2:22456610-23061425 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236781 TCONS_00236783 TCONS_00236782 TCONS_00236780 TCONS_00236779 1 XLOC_144572 NonCoding TCONS_00236783 XLOC_144572 NonCoding NonCoding - 9:22755827-22849972 - TSS177176 1680 2 TCONS_00236783_1 84 0.189880952380952 3 0.98218686267845 1.48377835276114e-07 6.23298721155908e-14 0.00024634312435984 2.82717448135846e-14 4.74933233656007e-09 1.01880880806487e-05 7.12567608362043e-08 0.000355282118107181 0.000804255939107787 2.0771171701366e-05 0 5.18573550546728e-14 3.41301171101938e-06 7.55998619738664e-05 8.484322628904e-05 0 0 0 0.000617565215645053 3.18378621760061e-17 0.000440654149616159 0 0 0 1.43542733447077e-06 0.0010612015835891 0.000541459242917635 0 5.22473180935512e-08 7.3205781591239e-08 XM_005212363.1 ZNF514 PREDICTED: Bos taurus zinc finger protein 514 (ZNF514), transcript 9e-55 219 85.79 0.1125 0 noncoding CTGTGTCTGTTCCCTCCCCTGACCTCTACCCACCTCTGCCTGGTGAATTTCTACCAAATTAGGTGAAAACAGGCCAGGAAGGAGCTCGGGTGGCCGCGTGGCTGAAGGACAGGGGGACCTCATGGTGCGGGCAGGCAGTGAGGAGATTACAAACAGGCCTGGTAGTTTCATTCCAACACCAGTGGAGGCTTCCCTTGGCTCCCCTCGCCATTCAGCTGTGACTCAGAGGAATCTCCTTGGCTGTGAGAGGGCTTGTGACCTGCACATCTGCTCGTCATTTACCTACTGTGGATCTGCTGGGCTGGTGAAGAACTGGTTCCTGCTTCTTCTGCCTTATTCTGTGATATGTGGAGAGAAATTGCTCCTGTTAATTTGACTCCATCCCTGGCTTTGCTCCTGTCAAATCGGATGCATGGAAATCCTCCAGAATGTACCATTCCCATGGCTCTCACCATCTTGTTTGCTCCTCCTTCCTGCGGTCAATACATCCCAGGTGCCACCTATGTACCTGCTAATTTTTACTCCCAGCTGCAATGAGTCACTTGAAGTTTTAGTCTATAAAACAAATGAAAAAAGAGAAAGTTACTGATGCATGGGATAGAGGATGTGATATTGATTGCTTTTAGAACAAAGAAAACCTGCTTACAGGTATCCCAGTAAGAGTGTGATTGGCAGCTTCTGCAAATACCCTGCGTCTCCAAAGTCAGAAACACAATGAAAGAGAGAGAAAAAACCTTATGTAACCATAACAGTGCCCATTATTAGTCTCTTAAAATAACCCAGCACTTTACTAAGATTTTGTGTATAATGATATCTTATTATTATTTTAAAGGTCTTTTTTGAGGTGGACCATTTTTAAAGTCCTTATTGAATTTGTTGTAATATTGTTTTTGTTTTTTATGTTCTGGTTTTTTGGCCATGAGGCATGTGGGATCCTAGCTCCCCGACCAGGGATTGAACCCACTCTCCCTGCACTGGAATGTGAAGTCTTAACCAGTGGACCACCAGTAGTCCTGATATATTAAAGCAACTCTCTGGGATAGGAGTAACTGTCCTCAATTTACAGATTAGGGAATATAAGACTTAGGGAAATTAAAGATACTAATAAGTAGCAGAGCTGAAATTCATACTCAGGAAAGTCTGACTCCAGTACTACTTATCCTTCCAACCAGCATTTTCTTGCTTCTTATTGGACTTTCCTCTTCTAGATCAGGTCCATGCTTGTGCTTTACTCAGTGAGATTTCTCGGAATCTGGAAAATGGTGTTTGATATATTTCAGGCTCTGTGATAATTCTGTATGTTAATGATTAAAATATATGAATCAACTGAACTGCAAGCTGCTTACTAGCTGCCATCTTTCTCTCTCTACAGCTGACATTAGAAAAATAAAGCTATAAAAACAGGTTTAAATTTTTAAATTAAAATCCACATTTCTGTACTATAGAATACCTCACTGCTATGCTTTATTTCAATAGATGAAGGTATTTTGAGTATTTTCAATTGATACGGCAACTTTTACTTGAAAATTCTACTATCTCTAGGTCATTCATAGATCATAAAACCATTTTGATAAGCAGGAGAATTAATAAACGATGCTCATGCAATTTGAAATTTAAAATTTTGAGTTCTCTGATATGTTAAAGTCTTTCTCTGTTTGTTAAGAGGGAATAAAATCAAAC TCONS_00234887 r 3' 299219 TCONS_00236786 TCONS_00236787 TCONS_00236788 s 3' 211454 EMBV3_32980 TACAAGTGGACTCTGCAGGGACGCCAGATAAATACCGAAATCACCACACTGACCGTCGTA Gene GeneID:781942|SECTM1:NM_001083787:162_cdna Constitutive 0 NULL GeneID:781942 19 GENE SECTM1 MGC157409 secreted and transmembrane 1 EMBV3_03508 TTGTGATCAGTTAAAAGTGGTAGAATGTATGATGAAGAAGAGAAGGATGATGGTGAAGCT Variant GeneID:100337273|LOC100337273:XM_002698862:448_cdna 652^801 1 EMBV3_21101 GeneID:100337273 28 GENE LOC100337273 NULL hypothetical protein LOC100337273 EMBV3_40049 ATCTAAGAAGCCACAACTCGCTTAGTTAGCTTAAGGGCAGGCAGCCATGACTACACTTCC Gene GeneID:523999|PITPNM2:XM_002694476:314_cdna Constitutive 0 NULL GeneID:523999 17 GENE PITPNM2 NULL phosphatidylinositol transfer protein, membrane-associated 2 EMBV3_37438 GCTATGTTGCCCAGGCTGGAGTACAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA Gene BVV0102_345061 - 1 EMBV3_39437 GK000030.2:40740612-40794410 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14997 GGAGGAGATGAGGGAAATCAGGAGAAAACTTAGGGAGCTGCAGTTGAGGAATTGTCTGCG Gene GeneID:100034674|NGFRAP1:NM_001163777:2_cdna Constitutive 0 NULL GeneID:100034674 X GENE NGFRAP1 BEX3 nerve growth factor receptor (TNFRSF16) associated protein 1 EMBV3_17059 TCCAGGATCCAAAATCTAACGTCAAATGGGCCCTGAAACTTACTCAAGACTGTTCACAGC Gene BVV0101_024124 + 0 NULL GK000016.2:44220314-44263936 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31288 TGGCACCATTAAGATGGCAACGCTGAACCTCTTCCAGATCGTGAGCAAACAGCTGAAGGA Gene GeneID:536427|CCDC42:NM_001101166:81_cdna Constitutive 0 NULL GeneID:536427 19 GENE CCDC42 NULL coiled-coil domain containing 42 EMBV3_16706 TTCGTTGTTCTGGCGATGGCTTGGACTCTGACGGAAATCAGACCCTCCATTGGCAAGCAA Gene GeneID:525332|RPESP:NM_001075869:37_cdna Constitutive 1 NULL GeneID:525332 14 GENE RPESP NULL RPE-spondin EMBV3_39709 AAATCTGCCCCCGCTCCTCCCTGCCCTCACTTCCTGAATGAAATGCTTCTGAGGTTGTTT Gene GeneID:508404|KIF3B:NM_001110788:952_cdna UTR3_Alt 2 NULL GeneID:508404 13 GENE KIF3B NULL kinesin family member 3B EMBV3_31311 AAGTTGAACATCGGTGGATCCCAAAATGAAAAATCCGGCCCTGGAAAGAAGAGGACCTAC Gene BVV0102_078723 + 0 NULL GK000013.2:60443947-60473753 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045816 TCONS_00045813 TCONS_00045814 TCONS_00045815 TCONS_00045811 TCONS_00045812 1 XLOC_026535 Coding TCONS_00045811 XLOC_026535 Coding Coding LOC100848209 13:60447027-60455353 = TSS33356 1528 1 TCONS_00045811_1 70 0.708769633507853 4 0.816936936936937 0.000105424495389167 0.000404328370751381 0.000450074011272173 0.000178174976455005 0.000217244455578242 7.81685806495939e-05 0.000108338784024051 0.000112731565719895 0.000193489646190266 0.00010720285959152 6.58738570924243e-05 8.27768971802751e-05 0.000110208967383037 0.000190471429165231 0.000141636107094971 0.00146911821653275 0.000216781284790433 0.000458763897598276 0.000414319102495638 0.000466832273521019 0.000190175719251219 0.000416697383732249 0.000161260374549345 0.000843842257106124 0.000350500267875953 0.000545650153406716 0.000310735750328098 9.4982047457051e-05 0.000119696301195798 0.000199388330607533 XR_227599.1 LOC100848209 PREDICTED: Bos taurus uncharacterized LOC100848209 (LOC100848209), 0.0 866 100.00 0.31348167539267 TCONS_00045811_1 sp|Q3V3Q4|PYDC3_MOUSE PYDC3_MOUSE Pyrin domain-containing protein 3; 3e-06 44.7 43.48 0.642857142857143 0 noncoding 0 0 0 0 0.0580856765877023 0.739925932300643 0.0121522610728088 0.789978141246078 CAAGGCTACGCTCCTGGCGGCGGAGAACTCAGGGAAATCCGGCCAGCTCAGACGAGGAACCTTGAAGTTGAACATCGGTGGATCCCAAAATGAAAAATCCGGCCCTGGAAAGAAGAGGACCTACTTTGATATAGACCCACTGTTTGACCCCCCGGCTTGGAGCCATGTCACTGCTGATCCTTAATCCTGGACTATCTCTATCAAAAATAACCCAAGAAGCACCTTTGCCAACTTGGGGACAGATAGAGAAACTATCTCTAGAGGCAGAGAAGATGGTACATAGAAGAAGACTGCCAGAAACACCAGACAACCTGTTCTTGGCTATGGTCACTTTGCTGACCATGGTGACTGGAGAAGAACAATCAAGAGACAACTAAGCCAACAACAGCAACTAGCATTTCTCACCATTTCTCATCATGTGGAAAATCAAAAAGGGGGAGATGTAGGAGACAGGAAGAATAGAAGAAAAGCAGACCCCGGCCACATGAGTTATTGCTTAAGCCCCTGCACGTTCCTTCCTTCACGGCTGAGAGTATAGCAAAGCTGGCATGGATTCAGTTTCGGCACCTTCACCTGGGAGCGGTGTTGGTCCCCTGATCCTCGCCTTTCACTGAACTCTTGTGTCTTGTTTCTCATTCTCCCGCCCACATCACACTTTCGGAAACCCTGCTTGTGGAGCCGGACTCAACAGACTATAAAGAAAGCTGAGCGCTGAAGAATTGATTCTTTTGAACTGTGATATTGGAGTAGACTCTTGAGAATCCCTCGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAAGAAATCAGTCTTGAATGTTCATTGGAAGGACTGATGCTGAAGCTTAAACTCCAATACTTTGGCCATCTGATGCAAAGAACTGACTTGTTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCGGGAGGAGAAGGGGAGGACAGAGGATGAGATAGTTGGATGGCATCATCGACTCAATGGGCAGGAGTTTCGGTAAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGCTTGCTGCAGTCCATGGGGTCGCAAAGAGTAGGACACGACTGAGCGACTGAACTGAACTGAATATTTACTGAGCATTTATGATTGTTAGGCTCTTTACACAGAGAAGGCAATGGCACCCCACTCCAGTGCTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCACTAAGAGTCGGACATGACTGAGTGACTTCACTTTCACTTTTCTCTTTCGTGCATTGGAGAAGGAAATGGCAGCCCACTCTAGTATTCTTGCCTAGAGAATCCCAGGGACAGAGGAGCCTGTTGGGTGCCGTCTACGGGGTCACAAAGAGTGGGACACGACTGACGTGACTTAGCAGCAGCAGGCTCTTTACATGCTTCATCTCACTCATCTCTTACAATATCCCATGGCACAGGTACTTTCATTATCATTTCCAATTTACAGGTGAGAGAAACTGAAATTAAAGAGATTAAATAACTTCTCCAGGGA EMBV3_33117 AAGGAGTCACGTGGGGCTGTGGGAACTCGAGAACTTCCAGGTCCTGAGTCAGAGACACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28320 AAAGAAAGAAGGATGGGGGCAGGGGAGCGCATGTAATTACGGACGAGGTCACATAAGTGA Gene GeneID:281861|IL2RA:NM_174358:7_cdna Constitutive 2 NULL GeneID:281861 13 GENE IL2RA CD25 MGC155054 interleukin 2 receptor, alpha EMBV3_18533 CTCCTCTAGGTGGCCTCTGTGATTTGTCTAGCAGATATTAAATGGGGACAAACGCGATGC Gene GeneID:281300|MC4R:NM_174110:20_cdna Constitutive 0 NULL GeneID:281300 24 GENE MC4R NULL melanocortin 4 receptor EMBV3_09553 TGCATCTTGCAGTACACAGAGAACCTTGCAGCTTGCACCAGGCAAGACAGGAACAAGTGG Gene GeneID:512804|C9H6ORF70:NM_001105255:12_cdna Constitutive 1 NULL GeneID:512804 9 GENE C9H6ORF70 MGC148787 chromosome 6 open reading frame 70 ortholog EMBV3_07698 GTCTGGAAAGGACACAGCCAGGAGGCTGATGCAGGAGAAAGTGGAAGGTACCCAGAGACA Gene BVV0102_071281 + 0 NULL GK000011.2:73977080-74045549 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39321 TCCATCTCTTTTTTAATGTTCTTTCTCAAGCCTTTATCAAGTGTAGTAGAAAAGCCTTTG Gene BVT0102_000679 + 0 NULL GK000030.2:142056939-142169418 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09978 CAGGATCTTCAATCCTTAGTTACAGCATGTGGTTCCCAGACTAGGGTCAAACTAGGGCCC Gene BVT0102_208378 + 0 NULL GK000004.2:105476201-105510875 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13339 ACTTTAAGAGGAAGTATGTGGAAGAAGAGGATTTTCACCCACCACTCAGCAGCTGTAGCC Gene GeneID:614583|SERTAD4:XM_002694266:262_cdna UTR3_Alt 2 NULL GeneID:614583 16 GENE SERTAD4 NULL SERTA domain containing 4 EMBV3_02816 ATTTGGTGGGTGACAAATATCCTGTTCCACCGATTAAACACTTTCGGGGAGGGATGGGGG Gene GeneID:539815|B3GALT2:NM_001076188:17_cdna UTR3_Alt 2 NULL GeneID:539815 16 GENE B3GALT2 NULL UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 EMBV3_01627 TAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAAGAAGAAAGGACAAACTTT Gene BVV0102_193086 + 0 NULL GK000030.2:99589625-99644182 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00250501 TCONS_00118490 TCONS_00012285 TCONS_00059696 TCONS_00250599 TCONS_00165977 TCONS_00118456 TCONS_00040258 TCONS_00111186 TCONS_00145751 TCONS_00250203 TCONS_00133817 TCONS_00233473 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00250681 TCONS_00173459 TCONS_00072261 TCONS_00055707 TCONS_00061483 TCONS_00204211 TCONS_00174806 TCONS_00031972 TCONS_00059695 TCONS_00161822 TCONS_00118487 TCONS_00232824 TCONS_00251680 TCONS_00036106 TCONS_00229794 TCONS_00031759 TCONS_00000529 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00220566 TCONS_00061487 TCONS_00118040 TCONS_00239997 TCONS_00228573 TCONS_00019195 TCONS_00010963 TCONS_00252081 TCONS_00061481 TCONS_00124524 TCONS_00216950 TCONS_00061490 TCONS_00110425 TCONS_00123823 TCONS_00174809 TCONS_00061485 TCONS_00242064 TCONS_00162767 TCONS_00018601 TCONS_00250671 TCONS_00022895 TCONS_00107436 TCONS_00010280 TCONS_00061489 TCONS_00125692 TCONS_00027918 TCONS_00118489 TCONS_00175330 TCONS_00173458 TCONS_00006385 TCONS_00006741 TCONS_00007850 TCONS_00197281 TCONS_00001865 TCONS_00166913 TCONS_00036105 TCONS_00129710 TCONS_00040981 TCONS_00061482 TCONS_00125637 TCONS_00219592 TCONS_00031886 TCONS_00246739 TCONS_00234240 TCONS_00087729 TCONS_00196823 TCONS_00174808 TCONS_00223565 TCONS_00118491 TCONS_00251851 TCONS_00132067 TCONS_00061491 TCONS_00145750 TCONS_00174805 TCONS_00056184 TCONS_00023655 TCONS_00171428 TCONS_00251677 TCONS_00207933 TCONS_00188145 TCONS_00188520 TCONS_00160961 TCONS_00089291 TCONS_00002600 TCONS_00207485 TCONS_00199364 TCONS_00099018 TCONS_00246740 TCONS_00251625 TCONS_00118459 TCONS_00220649 TCONS_00061484 TCONS_00210913 TCONS_00204210 TCONS_00037569 TCONS_00241019 TCONS_00001867 TCONS_00090382 TCONS_00132066 TCONS_00080713 TCONS_00118488 TCONS_00198905 TCONS_00078426 TCONS_00087730 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00205125 TCONS_00004603 TCONS_00228562 TCONS_00221350 TCONS_00056149 TCONS_00061488 TCONS_00001866 TCONS_00218901 TCONS_00009619 TCONS_00061486 103 XLOC_105290 XLOC_072622 XLOC_153444 XLOC_072644 XLOC_007831 XLOC_036486 XLOC_153542 XLOC_100817 XLOC_024074 XLOC_067086 XLOC_088920 XLOC_153146 XLOC_081223 XLOC_142955 XLOC_104695 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_153624 XLOC_104361 XLOC_044030 XLOC_033515 XLOC_036985 XLOC_124371 XLOC_018217 XLOC_098707 XLOC_142307 XLOC_154621 XLOC_021081 XLOC_139288 XLOC_018004 XLOC_000141 XLOC_120473 XLOC_151107 XLOC_103679 XLOC_133883 XLOC_072206 XLOC_146662 XLOC_138527 XLOC_009875 XLOC_006514 XLOC_155022 XLOC_076070 XLOC_131385 XLOC_066329 XLOC_075375 XLOC_148728 XLOC_099648 XLOC_009288 XLOC_153614 XLOC_013565 XLOC_063346 XLOC_005831 XLOC_077234 XLOC_015372 XLOC_105112 XLOC_001948 XLOC_002303 XLOC_003410 XLOC_118943 XLOC_000454 XLOC_101749 XLOC_078423 XLOC_024793 XLOC_077179 XLOC_132911 XLOC_018131 XLOC_143719 XLOC_052579 XLOC_118488 XLOC_136865 XLOC_154792 XLOC_080699 XLOC_033987 XLOC_014322 XLOC_103815 XLOC_154618 XLOC_126448 XLOC_114188 XLOC_114563 XLOC_097854 XLOC_054076 XLOC_000643 XLOC_126001 XLOC_121017 XLOC_059261 XLOC_154566 XLOC_133966 XLOC_129423 XLOC_021418 XLOC_147683 XLOC_055163 XLOC_049597 XLOC_120558 XLOC_047314 XLOC_148229 XLOC_124587 XLOC_001070 XLOC_138526 XLOC_134666 XLOC_033952 XLOC_132220 XLOC_005172 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_42690 CATCCTTGTTGACCATCATGTCTTACCCAAGAACAATCCTCCTGGACTGTGTGAACATGG Variant GeneID:524973|PRUNE:NM_001035352:109_cdna 339^523 1 EMBV3_24373 GeneID:524973 3 GENE PRUNE NULL prune homolog (Drosophila) EMBV3_36192 GGTCCTGAGGCCTGGGAATCCCTTTGGTTTCCTGATGAATGCACTCTGTGCTTTTAAGAA Gene GeneID:615804|RAB12:NM_001102292:191_cdna Constitutive 0 NULL GeneID:615804 24 GENE RAB12 MGC159513 RAB12, member RAS oncogene family EMBV3_01577 AGGGGACCACACCTTCATCCCTGGAGTCTGGCTTTAGCAACAAAGTTTGCATTTCCCTCT Gene GeneID:493726|CARTPT:NM_001007820:69_cdna Constitutive 0 NULL GeneID:493726 20 GENE CARTPT CART CART prepropeptide EMBV3_42099 GCCAGCGTCGGCGCACCCTGCACCAGAATGGTGTCCGGGCGATCCCCAAAGCAGCATGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19025 GTGGGCAATGTGACTAAGCCAACAGTGATCATCAGTCAGGAGGGGGACAGAGTGGTGATC Gene GeneID:777787|FABP7:NM_001078162:17_cdna Constitutive 0 NULL GeneID:777787 9 GENE FABP7 MGC140550 fatty acid binding protein 7, brain EMBV3_01457 GGTCCTGGTTGCTGTTCCGATCTTGCAGTTTCTTTTCACTATGTTGATCCTACAACTATG Gene GeneID:539417|C1GALT1:NM_001076160:54_cdna Constitutive 0 NULL GeneID:539417 4 GENE C1GALT1 MGC142672 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 EMBV3_02307 AGACTTTGGCTATGTAACCCGGGAGCCACTCTTTGAGACTGTCACCAGCCTGGATTCCTT Gene GeneID:617851|PADI2:NM_001105452:296_cdna Constitutive 0 NULL GeneID:617851 2 GENE PADI2 MGC152140 peptidyl arginine deiminase, type II EMBV3_43096 TGTCTTCCAAGCACGAATGCTGCCATTGCGACTGATTCTCACACAGCAAGTTGGATCCTG Gene BVV0101_045748 + 0 NULL GK000005.2:106032618-106068701 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42943 CAGGCAATGTAAAGGCACAGTTGTGGCAGTCAGTTTTTTTGAAAGTAACTTGTAAAGCAT Gene BVV0101_023591 + 0 NULL GK000011.2:14393802-14564270 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27665 GTGGATGACCCCAAGCTGGCTAACTCTGAGGGTACGTCAGAGGCCTGGGTTGACCAGTTC Variant GeneID:514832|PEX5:NM_001046183:43_cdna 781^891 1 EMBV3_41429 GeneID:514832 5 GENE PEX5 MGC138089 peroxisomal biogenesis factor 5 EMBV3_00908 AGCAGCTTGGGAAGTTGATTCTGGTCGCCGAAATACCTATTATGCCTCTATTGCAAAGGC Gene GeneID:505968|ACADM:NM_001075235:20_cdna UTR3_Alt 2 NULL GeneID:505968 3 GENE ACADM MGC128274 acyl-coenzyme A dehydrogenase, C-4 to C-12 straight chain EMBV3_28913 CACTGCAGGGCAAATAGACCTCATCTAGGTTTGTGTCCAGAAGCGAATGTTCCTCTCCAG Gene BVT0101_041500 + 0 NULL GK000002.2:1-184570 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186835 TCONS_00142474 TCONS_00149039 TCONS_00222177 TCONS_00107095 TCONS_00148450 TCONS_00054133 TCONS_00149040 TCONS_00206816 TCONS_00217533 TCONS_00063805 TCONS_00107075 TCONS_00167122 TCONS_00231774 TCONS_00066112 TCONS_00206815 TCONS_00176791 TCONS_00098199 TCONS_00162739 TCONS_00066107 TCONS_00185573 TCONS_00107093 TCONS_00178730 TCONS_00178729 TCONS_00161424 TCONS_00131535 TCONS_00088422 TCONS_00232767 TCONS_00048460 TCONS_00178886 TCONS_00185604 TCONS_00107100 TCONS_00231775 TCONS_00231769 TCONS_00033186 TCONS_00217532 TCONS_00107099 TCONS_00071451 TCONS_00158314 TCONS_00157046 TCONS_00072307 TCONS_00207543 TCONS_00222175 TCONS_00178734 43 XLOC_112886 XLOC_086899 XLOC_090916 XLOC_135486 XLOC_063006 XLOC_090330 XLOC_031942 XLOC_090917 XLOC_125336 XLOC_131531 XLOC_038531 XLOC_062986 XLOC_101958 XLOC_141262 XLOC_040830 XLOC_125335 XLOC_106565 XLOC_058445 XLOC_099620 XLOC_040825 XLOC_111626 XLOC_063004 XLOC_108503 XLOC_108502 XLOC_098315 XLOC_080240 XLOC_053209 XLOC_142251 XLOC_028592 XLOC_108659 XLOC_111657 XLOC_063011 XLOC_141263 XLOC_141257 XLOC_019420 XLOC_063010 XLOC_043222 XLOC_096768 XLOC_095506 XLOC_044076 XLOC_126058 XLOC_135484 XLOC_108507 NonCoding TCONS_00186835 XLOC_112886 NonCoding NonCoding - 4:35248676-35249129 - TSS139203 453 2 TCONS_00186835_1 48 1 0 0.000142605098492658 2.83435337760368e-05 8.42930445710795e-05 0.000376886822243988 6.3676026302074e-05 0.000740234462250582 8.87200727326192e-05 0.000265720632879397 0.000129029167803627 0.000147713945591424 9.89722505264532e-05 2.4666713213218e-06 0.000301077275550101 0.000134087356293885 7.87930429039593e-05 0.000118992495754264 0.00336638523879213 5.18494019336723e-05 0 0.000295909574001784 2.69917427885157e-06 0.000182201605019392 1.96892072324029e-05 0.000534315864615644 2.16674285266042e-05 4.41282776339266e-05 0.00016054285435945 1.39590100730935e-05 3.3667907060128e-05 4.72321671910955e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-32 143 74.21 0.549668874172185 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.58608107434698 0.00605222920620343 GGAGGGGGTGCCGGAAAACCTCAGTGTTCCTCTCGAGGGAGACCGGGATTTCGGGGAACTTTGTGGGTCGCATCAAGGGTGCCAAGTGCCCTTTCGACCTCCAGTTCCTAACGTGGGACTTCTCCTGAGGCGCTGTAGCGGGAAAGGGCTTCATCTTGCGATGACGGGGGAGCCACGTGGATTTTCTCGAGTTACGGCGGGATTCTCGAGTTACGACGGGGAATTCAGGCTGCCTCTTGTGTTGGCCCAGGCAAGTCCAATCTTCCATTCGAGTTGCGAAGGAAAGCTGGGCATTGCTCTCGAGTGACTGCAGGGCCAATAGACCTCATCTAGGCTTGTGTCCAGAAGCCAATGTTCCTCTCCAGGGGCGACAGGGATCTCGGGGTTGCATTCCAGACGCACCCGGGGAGACAGGCATTCATCTCGAGTGGAAGCAAAGAACCCCGCTCTGCT TCONS_00181292 . 5' 314404 TCONS_00181292 . 5' 314404 EMBV3_10308 ACAGTGACGGTCCCGCAGGAAGTCTCCAGTCCTAACTTCATGGAGAATGTGGCAGAGAAA Gene GeneID:280750|CLU:NM_173902:34_cdna Constitutive 2 NULL GeneID:280750 8 GENE CLU NULL clusterin EMBV3_02753 GTAGGAACGAGTGAGTGGCTTTCTGATGCTCTATATGTCAAACATCCTCTCTGGCACAAG Gene GeneID:615534|FNDC3B:XM_002684918:46_cdna UTR3_Alt 2 NULL GeneID:615534 1 GENE FNDC3B NULL fibronectin type III domain containing 3B EMBV3_12309 GCTTTCCAAGCTAGTGAACCAACAGCTTCTTGCTGATCCACTTGTTCCACCTCAGCTAAC Gene GeneID:288380|NDUFS1:NM_174820:17_cdna UTR3_Alt 2 NULL GeneID:288380 2 GENE NDUFS1 MGC140590 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) EMBV3_30271 CACTGTGTTGCTGACAGACGATGATGACTGAAAATGGTGAGGACTTGTGACTAACGGCCG Gene GeneID:574056|TNFSF8:NM_001025207:53_cdna UTR3_Alt 2 NULL GeneID:574056 8 GENE TNFSF8 TNFRSF8 tumor necrosis factor (ligand) superfamily, member 8 EMBV3_09883 CTGGGATCGTTAGCAGTGTCTCCGAAACTCCAGGTGAGGACGCGTAGATTCTGAGGCGTG Variant GeneID:508684|NR2C2AP:NM_001034327:38_cdna 171^255 1 EMBV3_33264 GeneID:508684 7 GENE NR2C2AP MGC143175 TRA16 nuclear receptor 2C2-associated protein EMBV3_34507 GGACGTCCGCCGGCGCTTAACACTAGTGATTAATCGAATACCCGCGGCCGCCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_17628 CTGAAAAAGAGTTCCACATTCTCCCTCACCGAGTTTTTGTCCCCATTCCGGGATCCACTG Gene GeneID:507724|LOC507724:NM_001080902:48_cdna Constitutive 0 NULL GeneID:507724 16 GENE LOC507724 NULL odorant response abnormal 4 EMBV3_35973 TCTTTGGATTGATGGGCAAACGGGATGCTGGACATGGCCAGCTTTCTCACAAAAGGCATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11371 GTCCTTGTCCACTGCAGGTTAGCAAGCAGCACTCTAGGAGACTAGAACCAATACCTTCTG Gene GeneID:785585|LOC785585:XM_002688316:166_cdna Constitutive 0 NULL GeneID:785585 6 GENE LOC785585 NULL similar to Transmembrane protease, serine 11b EMBV3_11821 CTTCACGCCTAAAAATGCAAAAAAGGGCGTAGGAAAGCGTGACCCGCGAGAAGCAGGTGC Gene BVT0102_201809 + 0 NULL GK000010.2:54887754-54903453 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22217 CAGGACAATGCCATGACAAATGCTTAATGGTGACAGGGACCAACCCAGCCGAGAATGGCT Gene GeneID:781546|C25H16orf82:NM_001145758:11_cdna Constitutive 0 NULL GeneID:781546 25 GENE C25H16orf82 NULL chromosome 16 open reading frame 82 ortholog EMBV3_14755 GATTCTCCTGAGCAAATTAGCAACCTGATGGCACTGTGTTAGCACCCAGATGAGCCTTGG Gene BVT0102_142967 + 0 NULL GK000007.2:90900798-92290237 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00223006 1 XLOC_136312 NonCoding TCONS_00223006 XLOC_136312 NonCoding NonCoding - 7:92080074-92082266 - TSS167004 2192 2 TCONS_00223006_1 89 0.0866788321167883 1 0 0.00110484166408179 0.00063719593288123 0.000884448882412934 0.00077283089575768 0.00142743433304476 9.62805932341334e-05 0.000724554511020862 0.000787908822011297 0.00093767285609395 1.1262320668887e-05 1.04433809899698e-06 0 6.41401033571924e-05 2.14598274212822e-06 0.00020591722343961 0 7.57402149768448e-06 0 0.00263239206659943 0.00201996605123213 0.000714153605126716 0 0 7.64809188061971e-06 0.00103779608153192 0.000369629772018828 0.000853568056125766 0 0 0 XM_871192.5 C23H6orf222 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf222 (C23H6orf222), transcript variant X3, mRNA. 1e-61 242 87.76 0.0885036496350365 0 noncoding 0 0 0 0 -0.396780132246437 0.0590248588180784 0.0411277610597015 0.588038660921382 CTTAACAGGTTAATTTTCCTCATAATAAAATGCATTTTGCATCTCGGCAATTAAACCATCTTATACTAAACCCTCTTTTAAAGAATATGAAAGGTCCGATACAGTCCCAGGTTCTTTCCCTTCCTACTATCACATCTCAAGTTGCTGTTACAGTGAAGTCAAATGTTGTGTTAAACTGTGATGAACTTGCTTTGAGATGCTCTTTCAATGTAGTGTCTCCTTCCAGTTTGAAGCTATTATCCCTCAAAGTCCTCAAAGGGCAAAAGATAATGAGTCATCTTCAGAGCCCTAGAGACTGACAGGAAAGCTGTCCTCCTCATAAATGATATTAGTAAGAAACCTCTACGTTGAAGGAGGAAGGGTAGGTAGGGGAAAAGGAGAAACACAACCCCTCATACCGTGTAATTTCCATATGAATTCATACATGAACCAAAGTAATATACCTAAAAGCGAAACAAAGTCACTACAAATGCTGTAAAAATAACTGGCGTTGAGGAAGATAAGGACGCTGCTGCCTATTGATCTGAATCCCTTTTGCCTGTTGGTTCTCACTTGACACTACACCATGGCATTTCCTTTTGTGACCCCTGGGTCTTGATCTGAAAACCTAAACAGTCATTTCTCACTGAGTGGGGAGAGAGCAGTTGTGTTAACATCTGTTTTTTAGGTCTTTTATTTTTAAGTTCTTGTTGAAAACTCCTTGATCTGCCTACCAGGGAATTGAAGCACATTCCATGTGCCTGCCGCCTAGCTCTCTTTTCTCTTTATTTGTTCTACAGAATATTGATTTAGATTTTGGCCTATTCGCATTGCTTTAAACTTTTAAACACTGGCTCTTATAGCTAGAGGAAACACTTTGCTGAAGCTAAAATGATCACCCAAGAGAACTTATTGGGGAAGCACACAGACCAAAATTAGCCCTTGGCTCTGAATGTACAGCTCCCATTGAAACCAGTGGAAGCTGAACTCTTAGGATTTGAAGACACATTTTCCTTTACATTGAGCATAAAGGCTTTTTGAAAGGGCTGGGTTTATTTGAGTTTCTGTTAAAGAAGCTGAATTAGCTCTCTGTCACAGGATAAAAAGAGAGGCAGCATTGCTTCTCTAATTTGTCTTGTAAGGGTTTTTTTGGATATCTAACAAAATTGCCAAGACACCCGTTTTTGTTTCTCTACACTGATTGTTTAATATTACAAAGGACCAGGCATCATACCAAGCACTTTCAGTCTTCTAAGTTCCTACAACATTTTACTATAACATTTCCTAATCCTTTACAACCAAAATAACAATAAAAAACAGAGTAATATTTAGAATCAAGATGAGAGAATGGGGAAATGATGGTTGAAAGCAAGCAGTCTGAGTTTCTGATGAGCAAAAATATTTTCAGTTCTGACTTTATCAACTGACGACTGCCATAAATCCTTTCACTCTTCATAAAGGTCTTTTATTATGCTATGGGTAGTGCTATTGAGAAATATCAGACTTTCCAATGCTTCATCTTGTAACTGATCTTACTGTTGAAATGCTCAGGATTACTTAACTGGAACAAACTAAGAGTCTGTGGCTCCCTTCGTTCACAAGTGGCATGGATGTACTGGCCACAAGGAACCTCTGCACCGGCCTTTCGCGGCATGACTTCACTACAGAGCACTTCTCCAAGGCTCATCTGGGTGCTAACACAGTGCCATCAGGTTGCTAATTTGCTCAGGAGAATCTTACCCTGGTTTCCCCAACTGTCCACAAATATAAAATGCATATTGTATACTTTGAGGTAAGTAAGGGCAAGGGCCACATCTCACTTATTTTTCTATCTCCCATCCCTAACATATTAATAGTTCCTATACAGAAGCAATTAATGTTTACTAAACTTCCATGAATAATGAACGAGAGAGGCCAGATCACACAAGAAACCATATGAGTTCATAGAAAACAAACCATGAAAGACCCTGAGAAAGGTAAGCCAGTTCTCAACGCACAAAGTAAGACCATGCATCAGCGTTCAGTCGCTAAGTCATGTCAGACTCTTTGTGACCCCATGGACTGTAGTCCACCAGGCTCCTCTGTCCATGGAATTTTCCAGGCAAGAGTACTGGAGTGGGCTGCCACTTCCTCATCCAGGGGATCTTCCAACCCAGAGATCAAACCTGCATCTCCTGCATTGGCAGGTGGATTCTTTACCACTGAGCCACCTG TCONS_00217976 TCONS_00217977 . 3' 207950 TCONS_00217976 TCONS_00217977 . 3' 210141 EMBV3_12068 CCGAGGCAAAGGTCTCATGATAGGAATAGAAATGGTGAAGGATAAGGAGAGCCACCAGCC Gene GeneID:521553|AGXT2:NM_001075821:30_cdna Constitutive 0 NULL GeneID:521553 20 GENE AGXT2 MGC140536 alanine-glyoxylate aminotransferase 2 EMBV3_20546 AGGATAGTGACCTCTCACCTGAAGAACGAGGATCTGCTACAAGTGACCAACTGCAAAACA Variant GeneID:532726|PPP1R2:NM_001035392:96_cdna 702^869 1 EMBV3_21984 GeneID:532726 1 GENE PPP1R2 MGC127677 protein phosphatase 1, regulatory (inhibitor) subunit 2 EMBV3_03690 CCGTAGCAGACTGTGTATCGGGGTGGGGGTACAGACTTACAGACCTTATCTTTTAGGGAC Gene GeneID:516287|CYB5R1:NM_001034518:139_cdna Constitutive 0 NULL GeneID:516287 16 GENE CYB5R1 MGC129038 cytochrome b5 reductase 1 EMBV3_31574 CAGAAAGTCAATCAGAATTGGAGGAAAAGCAAGCGTCTGCTCTCTCTGGAGGAGTCCAGG Gene GeneID:507760|PRDM10:XM_002699231:182_cdna Constitutive 0 NULL GeneID:507760 29 GENE PRDM10 NULL PR domain containing 10 EMBV3_20246 AGCTGCTGATACCCGATGACTGCTTTGTGTTGGACAACGGACTCTGCGGCAAGATCTACA Gene GeneID:353121|CAPG:NM_178574:29_cdna Constitutive 0 NULL GeneID:353121 11 GENE CAPG NULL capping protein (actin filament), gelsolin-like EMBV3_39760 AGGAAGGTTGTGACTCTGCTGACCTTAAGATGGAAAGATGTTCCTGGTGTAGCCACAGCC Gene BVV0102_278329 + 0 NULL GK000007.2:6326274-6342025 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218747 1 XLOC_132066 NonCoding TCONS_00218747 XLOC_132066 NonCoding NonCoding - 7:6333025-6335060 - TSS162745 2035 1 TCONS_00218747_5 315 0.885012285012285 1 0 0 0 0 0 0 0 0 3.48779993033128e-05 0 0 0 1.75709222567709e-06 1.4099652303381e-05 2.31154382221386e-06 8.05827423023603e-05 1.29786780503389e-05 0 3.6989052194409e-05 0 0 0 0.000123981649322073 0.000297537721847888 0 0 0 1.67952501037221e-06 0 1.43133127852536e-05 0 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 886 88.70 0.337592137592138 0 noncoding 0 0 0 0 -0.0551232351438389 0.662133667344796 0.0417472771673991 0.452853797266028 TGCAAGCGGTCTTTTCTCTAGCTGAGGGGAGTGGGCTTCTCACTGTGGTAACTTCTCTTACTGGCTCTAGACACTTGACCTTCAGTAGCTGTGGCACAAAGCCTTGCCCCACGGCATGTAGAATCTTCCCAGACCAAAGATCAAACCATTGTCCCCTAAAGTAGCAGGCAGATTCTTAACCACCAGGGAAGTCCAGTACATTTATTAAAAGACATCCTCAACAGGGTTTTGTAAGGCTTAATTGAGATGAGGTCTTTGTCTTCTTTCCCTGCCGTAACGAAATATCACAGACTGGGTGGCGTCAACCACAGACATTTCTTATCTCATAGCTTTTGGAGACTGCAGGTCCAAGAGCAAGATGTCAGCAGTGTTACTCCCAGTGAGGCCCCTTTCCTCAGCTTGCAGATTGCCACATTCTTGCTGTGTCCTGACGTAGCCTTTTACAGCTTTAACATGAATTTGGACAGGGGCACAATTCAGTCCATAATAGATGGTCAAGGGTCTGGGCTGTAGTAGATACTCAACAGCTATTAGTTCATCTACTTGGCTAAAATAGTATGCTTTGAGGCATTAAAAAAAATAATAATTTTTTTTTTAAATAATTTTTTTGGGTTTGTTTTTCTGGTGTGTTGACCAACAACCCAATCCAAAAAATGGGTAGAAGATGTACTTAACAGACTTTGTTCCAAAGGAGACATCCAGATGGCTAATAAATACATGGGGAAAAAATGCTCAATATTGCTTATTATTAGAGAAATGCAAATCAAAACTACAGTGAGGTTATCACCTCACACTTATGAGCACAGGCCTCAGAACTTGTGGTGCAGAGGCTCAGCTGCTCTACAGTGTGTGGGATCCTCCTGGATTGGGGATCAAACCCATGTCTCCTGCATTGGCAGACAGACTGTACCCCTGAACCACCAGGGAAGCCCTAACACAGCACATTTATTATCTCACAGTTCTGGAGGTTCAGTTCAGTTCAGTTCAGTTGCTCAGTTGTGGTCGACTCTTTGCGACCCCAAGAACCGCAACACACCAGACCTCCCTGTCCATCACCAACTCGTGGAGTTTACTCAAACTCATGTCCATCGACTCGGTGATGCCATCCAAGCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCTTCAATCTTTCCCAGCATCAGGGTTTTTCAAATGAGTCATCTCTTCATATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCTGATGAATATTCAGGACTGATTTCCTTTAGGATGGACTGGTTGGATCTCCTTACAGTCCAAGGGACTCTCAAGAGCCTTCTCCAACACCACAGCTCAAAAGCATCAATTCTTCGGTGCTCAGCTTTCTTTATAGTCCAACTCTCACATCCACACATGACCACAGGAAAAACTTTAGCCTTGACTAGATGGACCTTTGTTGGCAAAGTGATGTCTCTGCTTTTTAATATGCTGTCTAGGTTGGTCATAACTATTCTTCCAAGGAGTATGCGTCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCCCAAAAATAAAGTCAGCCACTGTTGCCACTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACTGGATGCCATGATCTTAGTTTTCTGAATGTTGTTAGAAGTCCAAAATGAATCTCACTGGGCTAAAATCAAGGTGTTGGCAGAGCTGGTTCTTTCTGGAAGCTGTAGGGGAGAATCTGTTTCCCTTCCTTTTCCAGCTTCTGTAGGCTCTCTGCATCCTTGTTTATGGCCCCTTCCTCTGTCATCCCAGCCAGCAGGGGCTGGTCTGATCTTTCTCATGATGCCTTCTCTCTCATTCTGACTCTTCTCCTCCCCTCTTCCCCATTTAAGACGGCTGTGGCTACACCAGGAACATCTTTCCATCTTAAGGTCAGCAGAGTCACAACCTTCCTTTTAGGCATGTGTGCAAAGTCCCTTCAGTCGTGTCCAATTCTTTGCAACCCGGTGGACTGTAGCCCACCAGGCTCCTCTGT TCONS_00211620 TCONS_00211622 TCONS_00211623 TCONS_00211624 . 3' 6645 TCONS_00211620 TCONS_00211622 TCONS_00211623 TCONS_00211624 . 3' 8679 EMBV3_11789 GAACTGATGAAGAAACAACTGACAATCAAGAAGGCAGTGTGGAGTCATCTGAAGAGGGTG Gene GeneID:522920|ATAD2:NM_001099020:44_cdna Constitutive 0 NULL GeneID:522920 14 GENE ATAD2 MGC159402 ATPase family, AAA domain containing 2 EMBV3_31358 AAGTTGGTGTTATTAAGCCATGGTTGCTCCTGGGGTCACAAGATGCTGCTCATGATCTGG Gene GeneID:505754|DUSP19:NM_001098878:14_cdna UTR3_Alt 2 NULL GeneID:505754 2 GENE DUSP19 NULL dual specificity phosphatase 19 EMBV3_16843 TGTAATGGTGATAATTGGGGGCCAGGAGAACCCCAACAACTCTTCGACCTCTTGCGAACC Gene GeneID:527574|SALL2:NM_001102112:70_cdna UTR3_Alt 2 NULL GeneID:527574 10 GENE SALL2 MGC166009 sal-like 2 (Drosophila) EMBV3_17141 ACAGCGGGGTCTATAGGTGTTACGGCTCTTTCACTTGCTCTCCCTACTCGTGGTCAAACT Gene GeneID:493736|KIR3DS1:NM_001008415:2_cdna Constitutive 0 NULL GeneID:493736 X GENE KIR3DS1 NULL killer cell immunoglobulin-like receptor, three domains, short cytoplasmic tail, 1 EMBV3_39811 TGTGTACTCAGGATCAGAACCGACGTCTACTCTCTGGGCACTGCTGTAAGATGGGTTTTG Gene GeneID:613773|PITPNB:NM_001078040:83_cdna UTR3_Alt 4 NULL GeneID:613773 17 GENE PITPNB MGC139835 phosphatidylinositol transfer protein, beta EMBV3_19631 AGCGAGAATTTTGCTTCCCCTTTGTGAGGCTCTGCTGACACTGGAGGGAGATGAGAGTAA Gene GeneID:530874|CLN8:NM_001075941:2_cdna Constitutive 1 NULL GeneID:530874 27 GENE CLN8 MGC139174 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) EMBV3_12704 GTTGTAAAGGATTAAGACCGCAAAATTGTCCTTCACGGGTAGAGTCAGGCGGCCCTATGG Gene BVT0101_023572 + 0 NULL GK000002.2:20773368-20776400 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41272 CCTTTATATCTTCTGCATAGCAGTTCTACCTCCTCTGCCTGCTTAACTGGCCCCAATAAA Gene GeneID:616094|HTR3E:XM_002684893:128_cdna Constitutive 2 NULL GeneID:616094 1 GENE HTR3E NULL 5-hydroxytryptamine (serotonin) receptor 3, family member E EMBV3_25467 AGGATGAGAGAGAGGTTTCGGGCAGTTGTTTTACTTCCTGCTTGGCGCACGAATTGTGGC Gene BVT0101_058786 - 1 EMBV3_29066 GK000005.2:55864961-55959927 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195039 TCONS_00195040 TCONS_00195038 1 XLOC_117901 NonCoding TCONS_00195038 XLOC_117901 NonCoding NonCoding - 5:55954773-55959403 - TSS145406 1412 2 TCONS_00195038_5 122 0.226628895184136 3 0.695614603586088 1.32685354460707e-10 1.00329234592927e-16 7.56598172620289e-05 0.000266078913604931 0 3.08487427222542e-94 2.19896959407692e-06 2.68369242484589e-08 0.000152503677954727 0 5.65909620408483e-10 1.0036969954847e-09 8.06662266687404e-10 1.31853476250689e-09 0 9.78732429842364e-62 0 0 0.000488611259373418 1.9234659204925e-09 8.19995641590019e-10 0 6.59346142142739e-05 0 0.00153222679275778 0.00041876055339269 1.5103691680359e-09 0 0.000213028600921694 6.50020930327687e-09 0 noncoding 0 0 0 0 0.00313674011887391 0.98047862126081 0.0658692462450664 0.446795712526555 TCCTTGCTCTGTATCGGGGTGTTCTTGTCTGGGTATCTCTACCCGCTTACGGTGGAATGGTTGCGCCCTTCGGGTAGCCAAGCAAGCCTCCAAGCATAAGTCAGGTCGGACCAGGATGAGAGAGAGGTTTCGGGCAGTTGTTTTACTTCCTGCTTGGCGCACGAATTGTGGCCCCCTCGTTTCACGCCCCAGGCACTTTGCTGCTGGCTGTGACTCCTGGACTCAAGATGGTGAAAGATATACATTTGTTCCCAAGAAGTGGAAACTCCAGAAAGGCAAATTTCAGTTCAATATGTCTCTTCCAGTGAGCTACAGCTATCCACAGGTGACATGGGCGCCTTAGGAGGAATGGAGCTGTTCAAGTCAAGGCTGGGGAGAGTGATGTCCAGTGAGATTGCACTGAGTGACTTCTGAGCTATTTCCAACCTCCATAGTTTATGATGAATGAAACTTACGCTGCCAAGGAAGAAACTCTCTGGAAGATCAAGATTTCTCTGGCCCCTGGGAGGTTGGGGCAGCTGACGGCCTTCCTGCTGTAGTTCCCATTGCCCAATATGCACCAGGTCTCACTGGGGGTTGCCTGCCAAGCAGGTCACATCTTAAACTGGCTCCCCATGAGGACAGGTTACCGTGAGGATTAAATGAGATAATATGGGAAGCACTGAATGCCTGATACACTGGAGGTGCTCAATAAATATGACTTTCCTCATCAACCTTGCCCTCTGCATCCATCATCTGCCCAGTTCCCCAGGCCAGGAACCTGAGGTCATCCAAGACACCTTCTCCCCACTCCTCCCCACTCCCCAATCCATCCTGAAGCCAAGTGGCTGTTCCCCTCACAAGTATTTGTCAAGCCTTTTCATTCTTCCGGTTCCCACTGCTGCTATCTGGGAGGAGGCTGGCAACAGGCTCCTAATCAAGCTCTCTCCTGCTCTAGGGCCCGCATCCAAATCCATCCCCAGTTCTCCTGGAAGATGCAAATCTGATCCTGGCTATATGAAATGATTCAGCAGTTCCCCAGGACTTTCAGAACAAACTCAGATGCCTGGCTCTGGCTCCTGGTGGCTCACCCGCCCCATTTCTCACACACCTTCCTACACTCCCTGGTGCTTCTGTCCCGAGGAAGGGGTCACCTGTGGTTCTTTGGCACTGTGTGCTTCCATGCTTTTGCACCCAGGGTTCTTTCTGTCTGGAGGCCCTACCCCCTCCCCGGTGCAATGACGCCTCATCCTTTTAAAATACAATTCAAGTGCCACCTCTTCCTCAAAACTTCCCAGGTCCCAGCTGGACTTAGATGTGCTTTACGTATTTCTCTGTGCTCCAGTATTTTCATTCTGCTTTACTTGACTGTTGTCCCTGCTCCAGTGTAAGCTCCTTGAGGGCAGACGCTGTCTTTTTTCCTCCACACCCCT TCONS_00191874 TCONS_00191875 TCONS_00191876 TCONS_00191877 r 5' 4367 TCONS_00191874 TCONS_00191875 TCONS_00191876 TCONS_00191877 r 5' 525 EMBV3_04042 CCAATGTTCAGTGGTGGAACTTGCAATCCTCAGTTTGTGGTCTGCCAGCTAAAGGTGAAG Gene GeneID:540786|PTEN:XM_002698370:158_cdna UTR3_Alt 2 NULL GeneID:540786 26 GENE PTEN NULL phosphatase and tensin homolog EMBV3_15548 TGATCAGACCAGTCAGTAGGTAACACATTAAGGGTGGATGAGGGTGGAGGGCAGTAGCCT Gene GeneID:785328|LOC785328:XM_002697675:162_cdna Constitutive 0 NULL GeneID:785328 24 GENE LOC785328 NULL similar to Uncharacterized protein KIAA1328 EMBV3_24849 CAGTGGTGAAACTTTTCAAGCGCACCATGGCCTTGTTGTCCAAACCTTCACTGGAGCTCA Gene GeneID:539238|ANK2:XM_002688100:173_cdna UTR3_Alt 2 NULL GeneID:539238 6 GENE ANK2 NULL ankyrin 2, neuronal EMBV3_03419 ATCATGTCCCCCTGGCTCCTCCCCATTCCATCTTCAGGCTGCTCCACTACCTGGCTCAGT Gene GeneID:100296776|LOC100296776:XM_002698207:770_cdna Constitutive 0 NULL GeneID:100296776 25 GENE LOC100296776 NULL hypothetical protein LOC100296776 EMBV3_43089 CTTTGTTCCCCGAGAGGGAGAGTTTGTGGCCAGGTTTACGCAGCTTGTGGTGAGTGAAAA Gene GeneID:538870|NKX2-5:NM_001046443:142_cdna Constitutive 0 NULL GeneID:538870 20 GENE NKX2-5 MGC137749 NK2 transcription factor related, locus 5 (Drosophila) EMBV3_10289 AGGCAGGATGAAGTCTTTTCCTATGAATGTGTCTGCTTACCTCATTATGGCTCATGCTTC Gene BVV0102_217538 + 0 NULL GK000003.2:100055386-100059949 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170901 TCONS_00170899 TCONS_00170905 TCONS_00170908 TCONS_00170909 TCONS_00170910 TCONS_00170900 TCONS_00170903 TCONS_00170902 TCONS_00170906 1 XLOC_103683 Coding TCONS_00170903 XLOC_103683 Coding Coding KIAA0494 3:100019928-100058259 j TSS127583 4964 1 TCONS_00170903_3 428 0.0155116841257051 10 0.870753978606835 0.000872925393217332 0.000780807850826601 0.000808672686351307 0.000163216783369177 0.000535060356148284 0.000143344465330672 0.000718968326632747 0.000696763083433886 0.000752066660928824 0.000109074998145564 1.92891375320238e-25 2.88988933345944e-05 6.99246290653849e-05 0.00038612922235496 0.000335737983110183 0.000544667787682627 8.09095141555801e-15 0.000478367659219306 0.00120342837575344 0.000724676005561945 0.000109337728499439 0.000358615886232602 0.000610398129952367 6.11310340514964e-05 0.00154840499430457 0.00111268941064603 0.001157482833728 4.17728999580352e-19 4.64330120459699e-05 0.000112025982236747 XM_589637.7 EFCAB14 PREDICTED: Bos taurus EF-hand calcium binding domain 14 (EFCAB14), 0.0 6653 100.00 0.742949234488316 NM_014774.2 EFCAB14 Homo sapiens EF-hand calcium binding domain 14 (EFCAB14), mRNA. 0.0 2096 76.93 0.542908944399678 TCONS_00170903_3 sp|O75071|EFC14_HUMAN EFC14_HUMAN EF-hand calcium-binding domain-containing protein 14; 0.0 698 75.76 0.997663551401869 0 coding 1 1 0 0 -2.4766618998155 0.00731551246903821 -0.0451143712968011 0.363364672747581 CGGCCAATGGGAGTGCGCCTTACTGGCAGGCGATGCCGGCGGCCGCTGCCAAAGGGGAAGTGAGCTGGGGCTGAAGCGATGGCCCGGGTCTGGAGCCTGCGGCCACAGCCGCCGCCGCCACCAGCGACTTGGGAGCAGCTGCGGCCGCAGCCGGAGCGGGGGCCGGAGTCACGGCTGGAGTGGAGGCGGCGCGTGTGAGTTGCCGAGAGTCGCCGTACCGGAACACCTCAAACTCGGCGGGAGCGCTTCAGAAGATGAAAAAGCGCAAAGAGCTCAATGCATTGATCGGCTTGGCTGGGGACAGCCGTAGAAAGAAACCCAAGAAAGGCTCAGGCCACCGCCTGCTTCGCACGGAGCCTCCTGACTCAGACTCCGAGTCCAGCTCAGAAGAGGAAGAGGAATTTGGTGTAGCTGGAAATCGCTCTCGCTTTGTCAAGGGAGACTATTTACGATGCTGCAGGATCTGTTATCCCCTCTGTGCGTTTGTCATCCTTGCCGCCTGTGTCGTGGCCTGCGTTGGCCTGGTGTGGATGCAAGTCGCTCTGAAGGAGGATCTGGATTCCCTCAAGGAAAAGTTCCGAACTATGGAATCTAATCAGAAAAGCTCATTCCAAGAAATTCCCAAACTTAATGAAGAACTACTCAGCAAACAAAAACAACTTGAGAAGATTGAATCTGGACAGCTCGGGTTGAACAATGTCTGGATAAACATCACAGAAATGAATAAGCAGATTTCTCTGCTGACTTCTGCAGTAAACCACCTCAAAGCCAATGTCAAGTCAGCTGCAGACTTAATTAGCCTGCCTGCCACTGTAGAGGGACTTCAGAAGAATCAGCACACCTTGAAGGAGAGCAATGGAAGCAACCAGATCATTCCATCACCTTCTACTATATCTGAACTTGACAATAAAACCCACAGTGAGAATTTGAAACAGGATATCCTGTACCTTCACAGCTTTTTAGAGGAAGTAAACAGTGCCCGAGTGGGGTACCAGAGACAGAATGATCTTAAACTTGAGGGGATGAATGAGACCATCAGTAATCTTACCGAGAGAGTCAACTTGATAGAAAGAGATCTGGTTGCTATGAGCAAAGTAGAAAAGCAGGCGAACCTGTCCTCCAGCATGAAAGAAGATAGTTCAGATTCTCAGGTATCTAAGCTTAGAGAGAAGCTGCAGCTGATAAGTGCTCTCACAAACAAACCTGAGAGCAGCAGGCCTCCGAAGACTGCCAGTGAAGAGCAAGTACAGAATTTCACATCACAGCCATCAACATTGCCAAAATTCCCACAGTCTCTTGGAGACCAGATTGAGAAAGCTGTCCAGCTAAGACCTGTTTCCCTTCCAGGAATTTCTAGCATCGAAGATCTTCAGGGCTTATTCCATAAGACTGGCCAGGATGTGGATGGGAAGCTGACCTACCAGCAAATCGAGGACACCTTAGAGTCTGTTGGGCCAGAACCAGAGCGTTTAAGAGAGTTTGATTCTGATGGAGATGGAAGATACTCATTCCTGGAGCTGAGAGCAGCTTTAGGTGTCTAGCCTCATCAGGCTCATTTCAGAAGTGGATGTATGCTGTGGACTACCTATTATCTGCTCAGCTAACACAAACAACCCTTCTACCTACCAATCAATCCTCCAGTCCTCCAAACTACAGTAGCAGACACATTGTCACCTTTTAACTTGTTTGAAAAAGCTATATAAAAGTTATTTTTTTAAAAAAGACCATTTTACTTATTCAGAAATCTATGATTTCCTGAAACCAGTAAGATCTTAATTTTAAAATTGCCAGAAAAAAAGTCAAGCCCTCTTTTTTTCTCTTTCCTTTTTCTGAGGGGAGGAGACCTTATCTTTTAAAACTGGAAAATGTGTATATAGAGAGACTAAGCCACCTTTTATATTTCACATAAATTTGCCTTAAATTAGCTGCACTTTATACAGACTCAGAAAATGTCTTTCCTTTAACAGATAGACCTTTTCTGTTTGTAAATATTTAAAGTGAAGGAGTTGTGCATATTTTGTGAGAAGTGGGGAAAATGGTTTGAAACAGGATGTGAACAAATGACTTGTTATTAAAAATTGCTAATCTTACCTGGTAGCAGCTTGAAGCTATGTCCCCGTCTCCTTAAGACATCTTTAGGTGCTCCATGGGGTGTGGCCTGGTGCTGGGGGAATTGATTAAGGGAGTGGACACTGAGGGAACAGGGCTGCCTCTAGACTCAGGAACGTAAGATCTGGCTATTTGTTCTGTCCTCCCATCCTGTGAACCAGAAGTCTTGTTGGGGATTTTCTCATTTTAATCCTGTTTCAGGGTTTATATGCATAAAAAGTTAATCCAGTAGGAGCCAGTAGTTTTCCCCCCTGAGTGAACTAGATTATCTTCCCCCACCCATCCACTCAAGTCTACCTTTAAGCTCTAATCGACTTTCACCTCTGATACTGTCTCCATTCTGAATGGCAGGGCTGCAGTCCCTTGGCCACTGTCTCAGCCGGGCTACTCAGGAACTATAGAGGAAAGCGCTGCCTCTAATTCTGATCCAGGAACCTTCTTGAGATTTTTACCTGGGGGCTAACCAAGAACATAATGTGTTCTTCTGTGGGCTGACTAAGGCCAAAAAGGTTGTAAAATGAAACACCTGAAATCATATTACGTTTCCTTACAATTGCAGCTCAGAAATAACTAGAGGCTTTCTGTCCAGAGGATTCTGTCCAGAGAACATGGCAGGCAGGCCTGGAGTAGGGGCTTCACATGATGGCAGCAAGTTTTTTCAAATCTAATACAAGCAAGTATAATCCTCCCGTTAAATACTTCTGTAGCCCTGGTACTAAAGGTCCCTGGACTAGAAGGAATTGTTTCTCCATGTCACCTACATTTGTGCTATGTTGATCTTCGAAGCAATCTTCAGGCTACACAAAAGGGAAACTGAAAAATTTAACTGTGCTGTCAGCCAAGTCAGGGAGAAACTAGAGAAGCCTTGAGACTTCTTTGGTAGGGTTTGTTTCCATTTTCACTTTGTCCAAGTTTCCCTGTTAGCCATGGATACAGTTGAGCACCTTTAAATGTTTAAGGGCTGTTTTTTTTCTTCATATGATGTTCAGCTTGGTGTTGGCTAACCTTTCTTTTTCCCTAGAGATATTAAAATTTAGAGTTAAGGCAGGATGAAGTCTTTTCCTATGAATGTGTCTGCTTACCTCATTATGGCTCATGCTTCTAATTCCTTTGCCTATCTGTGCTATTTTATGTTCTTGGAAAGGTTTAAGTATAGTATAAAATTAGTCTGGCACTTTAGGTAACTTGAAGATACTTACTCTTCTGGCTGCCTTTCATGCCCCCCCCCTTTTTTTTAATATATATACCCTTGCAAATTTTGTAACAACCAAATAAAATTCTAGCAATAAATTATACTGCTATATTTGTATATATTGTACCATAAATAGTATGTCTGTACCTGGAAGGTATTTTTTTTTGAGATTTGATTTATAAGAAACATACTTGAGGGTAATGTAGCTTGTCCTTTTTAGTTTCAAATTCTTATTCATAGGCAAACACTTTGAGGACACTTTTACTCTTTGTATGTGCTTCTCTTTTGCATCAGCTGTGCTTTTCAGTTTATCCTCTGTGCTTCCCACCTCAAGGTGGATGGTGCCATCCTCTCCCCTACCAAATTTGGCAGAGGTGTTCCTCTACACTCTCAGACCTGTGAATACCCTGTCACACCACCTGGGAAAATGCTGTATCTCCCGGGTAGAACTAGGACATCTTGAATGCCTTTGTTCTAAGTTAAGCATATTTGTCGGCTTAAAAGAATTCCCATAAGCCTATATTGTTCATTATTTTTTATTTTTAATTGGAGGATAATTGCTTTACAATATTGTGTTTGTTTTTACCATACATCAACATAAATCAGTATCATTCAGTATTAATTTGGGATTTTTTTTGAAAGTTGTCTTAACTTACCCAGCATATGTTGATCTGTAATCAAGCCTAACCTGCCACACCTCAATCCTGAGAGGAAGACTGAGTAGAATTAGTAGTTTTGGTTTCAGTTTTCATTTCAAATGCTTTTTTATCTCTTCATTCTGGCAGCTCCTACTGCTTTCCTAAGTTACCCAAGGCATGACTTCTTGGTCCTGTTTTTCTTTTGCCGTCTATCTGGTATAATGTTTACCTAGAGAGACTCCCCCATAAATCGAGGGGCAATATATTAAAGGAAGAGAAGACTCAAAGAGAGAAACTGGCTTGGATCCCTAAATAGTAGTGTTGTCTTACAAGCAGAGAAGGGCCTGGCTCTTAGGGTTGTGTCTGTTACAGCCCAGCTGAAGAGTGGACACCCTCCACCTGCTGCTAGCTGCTTTCCCTGCCCTCGGCATTCCCTCACTTTGTTGCTGGACAGAGCCCCATCTGCCCCCCTTCTTGCTCTGGTCTTGGCGGTCACAGTTGAAGATTTTGACTGAGATGGGCTCATACTCATAATGGCCTGTTGTTGAGTTGTTTTTAGTGACAGCTTTTGTTTGCTACACACCTCATTGGCTTGCTTACCAACACAACACCAGTAAGATGTGGGTCCTCTCATATCCAAACCAGAACACATTTGGGTATTCCTGAGACTTTATAGAGCGTATATCGTTTGTTATACGAACCTAACCTATCTTGTTCTTTTCTCATATTAAGAAATGTAAACCTACTTTGCTTTAGTGGAGCTATTTTGGTAATGTTTAAGCAGTTTTGATTCTGTTTAGGGAGTGAATTCAAGATTTCCATCACTTGATTTGGGCTTTGCTAATTTCATGTCAGTAATAAAACCATTTTAATTTATATAAATTAAACATTGCTTTTTTCTTCCACTGTGTCTATGATTAAAGGCTCATGTGCCCCCCCCCCCATTACTAAGAAGAAAAATCTACTTTGATCCTTATTTTTATGGACTCCTTCCTCCTTTTGGATGCAAAGCCTAACAGATGGTG EMBV3_07118 TCACTGAATGCATGAATGAGGGAGTGAGCAAGTGGAGACATGGCTGGGGGATATCTGTAG Gene BVV0102_174264 + 0 NULL GK000005.2:66077961-66127245 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192352 TCONS_00192353 1 XLOC_117157 Coding TCONS_00192352 XLOC_117157 Coding Coding DRAM1 5:66043814-66079316 = TSS143967 2629 1 TCONS_00192352_2 238 0.0593381513883606 7 0.926142925551393 1.03439590123227e-05 1.14614575732671e-05 0 0 0 0 0 4.49695976212894e-06 6.00201844249429e-05 0.00065985768638591 0.00109338449009764 4.62415840372731e-05 1.02808936611311e-05 0 1.21285602422425e-11 0.00210455298882548 0.00157724521480493 0.0039494051501323 0 0 0 0.00301772502533629 0.00186395652695435 0.00170483214947033 0 0 0 0.00222587147240987 0.000442369833310488 0.00300301655509127 NM_001031767.2 DRAM1 Bos taurus DNA-damage regulated autophagy modulator 1 (DRAM1), 0.0 4742 100.00 0.99961962723469 NM_018370.2 DRAM1 Homo sapiens DNA-damage regulated autophagy modulator 1 (DRAM1), 0.0 1485 82.35 0.558006846709776 TCONS_00192352_2 sp|Q8N682|DRAM1_HUMAN DRAM1_HUMAN DNA damage-regulated autophagy modulator protein 1; 3e-169 471 95.80 0.995798319327731 1 coding 0 0 0 0 -0.021250845722822 0.84309504714885 0.0262730263353979 0.696471913440415 CTCCGTGGAGCGCAGCGCCCTCCCGGCGGTGGCGGCGCGATGCTGTGCTTTCTCCGGGGAATGGCCTTCGTCCCCTTCCTGCTGGTGACCTGGTCGTCCGCTGCCTTCATCATTTCCTACGTGGTCGCCGTGCTCTCCGGGCACGTCAACCCCTTTCTCCCCTACATCAGTGACACAGGAACAACACCTCCAGAGAGTGGCATTTTTGGATTTATGATAAACTTCTCTGCATTTCTTGGGGCAGCCACAATGTACACAAGGTATAAAATAGTAGAGAAGCAAAATCAAACCAGCTATTTCAGCACTCCTGTTTTTAACTTGGTGTCCTTGGTTCTCGGATTGGTGGGATGCATCGGAATGGGCATTGTAGCCAATTTCCAGGAGCTGGCGGTTCCCGTGGTCCACGACGGCGGTGCCCTTCTGGCGTTCGTCTGCGGCGTCGTGTACACGCTCCTGCAATCCGTCATCTCTTACAAATCCTGTCCCCAGTGGAACAGCCTTTCCACGTGCCACGTGCGAATGGCCATCTCTGCTGTGTCCTGCGCAGCTGTCATACCCATGATTGCCTGTGCTTCACTAATTTCTATAACCAAGCTGGAGTGGAATCCAAAAGAAAAGGATTATGTATATCACGTAGTGAGTGCGATCTGTGAATGGACAGTGGCCTTTGGTTTTATTTTCTACTTTTTAACATTCATCCACGATTTCCAGAGTGTCACCTTAAGAATATCCACAGAAATCAATGGTGATGTTTGAAGAAAGAAGAACTCTATCTCACTCAGTGGAAGTGGCAGACAATTCCTGGAAGTGGTACAGAGGACAGACAGGGTTTTAATGCTGCCCTGTGTGGAATTCATCTGCAGCACATCCAGGACTTGAATTTCTTTAAGAATTCCCAATAGTTGTACCATTTCCAAAGGTATGTTTTCCTAGAGAATGTAGAGCGTTTATGACATTGTAGCAATGTTTTTATAACTTTCCAAGTAGACACTGTTTTTGTATTAACAAATTCCTGACAGACAAAATAAGGTATTCCAGCAAATGGAGACCTCTTATTTTTATACAAATTCTGTTTTTGTTAATTTCTGTCTGTGTGAGTGATTTGTGGAGTACACTAACTGAGAAATTCATTCAAAAGTAAAATCAGGGGATGTTCTTTTTAAGATTTTATTTTTAGAGAATGCACTGTATAATTTTATATCATAAGAGCATTTCTAAAATTCAGTTTAAAATGATCATTAAGATTTAGTTAATAAACTAACACTAACTAAGAGACTGATTTTTAGATGAACCAAGCAAAAAGCTTCTATCAAAAGGCCTTAAGACCACTATGCGCATTAACTCAGTGACCATGGAAGACCTCAGTTTTGAAATTCCGTCCCCCGACCCGTGGGCCTCTCTGCTCACAGAGACCCAGCTTTTACCCTTGCTGCTAACTGACGGCAGTCTGTAGTGATGTGTTCCAGGTGGGATGGTTTCAGCCAGGCAAGTTAGAAATCAAATCCTTCTAACAACAGAGTGAAATGGAGGTGAGCAACTAACAAGAACTCACTGGATTCCAGAGTGATGAGGGGAGGAGGGGAGTGTGTCTCAGGGAACATCCGAGGAATGCGGGATTATGGGAAGGAGACTTGCTCAATCCTAAACCTCTGCAGAAACCAACCTGCAAAAAGCATTACACATTCCACTTACAAAGCTGCCCTTTATTGTTACTGGCACAACTCGACACACTGTCTGACTCAGAAGCCGCACCACACATCTCGCATTCCTTTCACGCCAGCCCATGGGCGCTGACGGGGAGTGCAGGTCTGAGAGGGGAGGGAGAGGAGCATGGTGCAGGAAGGAGTTACTTTGCTCCTCTTCTTCATCCCCACGGCTGGATGTTTGCACACTCTAAGAAATGTGAAGCAGATCCTTTGCTCGGTAACAGCACATCACGAATGACAAGTGAAAAGCAAGTCATTCCAGAGGAAGAAGTGGCTCTTGAGATGCAAAGGTTTAAAAGTGGAAGAGAAGGAACTCACCTTCAGGGACCCTCCAGACCAGAAACCCGTATCTGGCCAAGAGGTTCCAGACCTTGAGGGCTCATGCCAAGGGCAGAGCAGCTCACTTGGCCAGCCATGGAAGGAGGCTCAGTAGTGGTCAGCCGCCTCCGCAAGGACAGACCCTCTCCCCTGCGGGTTCAGTGGTGAGAGACTGAGACCCACCTCTGGGTTGGTGGTAACTTGGAACTGAAATGCTGGTTACGTCTGTGTTCTGCAGAGGAGGGAAGCCACTTACCTTTGCTGTGGAACCTGCAGTAGAATGAATCCACAGTTGGGTCTCCCTTGGAACAGACTGTTGTTATCAGCCCTTCTTGACACATTTATTGTCATCCTTAATTTCTGTATCTCTCTGCGTGATTTAGATTGGGAGCTCCTTGAGGGCAGAAGTCTGTGCCTTAATCTTTGTTACTTGAGCATTTACCAGGCTGCCTCCTGGTACACAGTAGGTGCTTAATAAAAACTCACTGAATGCATGAATGAGGGAGTGAGCAAGTGGAGACATGGCTGGGGGATATCTGTAGTACTGCATAAGGAGATTTACTCTGGTTTACTAATGAGGTAATAAATAGCCTATGTCACCTTTT EMBV3_40655 GGTAGCATCCCCGTCCAAGGGGAGATATTTGAATCTTTTCGTACCTTGAATCACTGCCAG Gene GeneID:616675|NOP10:NM_001114521:103_cdna Constitutive 1 NULL GeneID:616675 10 GENE NOP10 MGC127529 NOLA3 NOP10 ribonucleoprotein homolog (yeast) EMBV3_01610 AGACGAACAGCCGGTACTATTAGACGTTGTGGGTGTTGTAGTTGTTCTCCAGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_35277 ATAACATGGACTGCTGAGAGTTGTCCCAGATGGCTGAGTGCCGTACCACTGAGGCTGTCA Gene GeneID:528654|VPS41:NM_001083453:37_cdna Constitutive 0 NULL GeneID:528654 4 GENE VPS41 MGC137278 vacuolar protein sorting 41 homolog (S. cerevisiae) EMBV3_07911 TCATCAAAGAAGGCTGGCTCCATAAGCGCGAATGCCAGCTGATGAAGACCGAGAGACCTC Variant GeneID:534923|AKT2:XM_002694989:182_cdna 227^355 1 EMBV3_17056 GeneID:534923 18 GENE AKT2 NULL v-akt murine thymoma viral oncogene homolog 2 EMBV3_09215 CACTGCAGAGCTGGACTGTAATGGGTCAGCCTCTCTTGTAGCCAGGGGACCATAGAAGAG Gene BVV0102_241630 + 0 NULL GK000019.2:36939654-36946357 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096629 TCONS_00096626 TCONS_00096630 TCONS_00096628 TCONS_00096627 1 XLOC_058017 Coding TCONS_00096626 XLOC_058017 Coding Coding XYLT2 19:36945279-36949561 j TSS71757 1751 1 TCONS_00096626_1 191 0.0531125071387778 3 0.591684185937865 5.88713437962261e-76 1.8830550416916e-05 1.2126171009235e-15 1.40867955401837e-26 0 1.51929220888035e-05 6.66094995105253e-06 0.000391837297248588 3.15424748561944e-05 4.26706863690883e-09 9.39198882211504e-06 6.22774319690103e-06 0 8.05935009369542e-06 1.61940959318195e-71 0.0036450600520657 0.000644749848987265 0.000618411566156265 2.81627603903054e-12 1.79741196757699e-07 0 1.61929494027947e-08 0.000318197864704262 0.000858410079800395 1.28873537247334e-06 8.74604107754039e-06 3.34590042077975e-06 0.000493192940580239 9.38099084481763e-05 0.000514669573629523 NM_001008667.1 XYLT2 Bos taurus xylosyltransferase II (XYLT2), mRNA. 0.0 1177 99.55 0.376356367789834 XR_243678.1 XYLT2 PREDICTED: Homo sapiens xylosyltransferase II (XYLT2), transcript 0.0 1454 80.52 0.858366647629926 TCONS_00096626_1 sp|Q5QQ49|XYLT2_BOVIN XYLT2_BOVIN Xylosyltransferase 2; 6e-129 387 98.95 0.994764397905759 1 coding 0 0 0 0 0.0565437274696572 0.638423370287897 0.000852212867663044 0.98948543181623 CTCTGCAGCCCTCCAGGTCGGCACCGAGTGGGACCCCAAAGAGCGTCTCTTCCGGAACTTTGGGGGGTTGCTGGGGCCGCTGGACGAGCCTGTGGCCATGCAGCGCTGGGCCCGGGGCCCCAACCTCACAGTCACCGTGGTGTGGATCGACCCCACCTATGTGGTGGCCACATCTTACGACATCGTGGTAGACGCGGAAACGGAGGTCACGCAGTACAAACCCCCACTGAGCCGGCCCCTGCGGCCAGGGGCCTGGACTGTTCGACTGCTTCAGTTCTGGGAACCCCTGGGTGAGACCCGCTTCCTCGTGCTGCCCTTGACCTTCAACCGCAAACTACCTCTCAGGAAAGGTAAGTTTTCCCAAATGATAGCTGGACCACCCCACAACGAGTATATGGAACAGAGTTTCCAGGGCTTGAGTGGCATCCTGAACCTGCCTCAGCCAGAGCCCGCGGAGGAGGCTGCCCGACTACATGCAGAGCTCACGGGCCCGGCGCTGGAGGCCTGGACAGATGGGGAACTAAGCAGCTTCTGGTCTGTGGCCGGAGTGTGTGCCGTGGGCCCCTCCGCCTGTCCCTCCCTGGAGCTCTGCAGACTGACCAGCTGGAGCTCTCTGTCCCCGGACCCCAAATCTGAGCTGGGGCCTGTCAAAGCAGATGGGCGACTCAGGTAGCAGGGTCCCAGCCAGTGCCTACGGAAGACCTGGGAAATTGCACCTTACAGATGACGGAGGGCTGTCTCCCTCACAGGCAAGAACCAGGGGCCCAGGCTGTACACCCATGTCAGCCATCCAGAACCCACAGACGGCAGGGAAGGTGGGCATAGTATTTACCACTGAAATGGCTCTGCTGGGGACCAGATGTTAGCAGGAACATGGGGAGAAGGGCTCCAGCCTCCTCACATTCTCCTCTAATTTTTTTTTTTTTAAGAAAAATGGGTGGTGGGGGATGAACTGGAAACAAAGATGTGCAATAGGGCCCAGAGCAGCCCCAGGAAGTGGGCCAAGGCTCTGGGGAGCAGAGGCCAGACAAGCCCATCTGCTGCTGCTCTGGAGGAGGCTGGGCCTGCCTCACTCTCTAGGGCCTCACCCCCCAGCTTTGGCCTGTGGTGCTCACGGCTGAGGCTCTGCGGGGCTGCAAGTGCTGTGGCAGGCTCTGAGAGCTAGAGAACAGGTGATCAGGGAAGCACTGCAGAGCTGGACTGTAATGGGTCAGCCTCTCTTGTAGCCAGGGGACCATAGAAGAGGGGGCGGGGCTGGCCCTAGGGCTTTCCAGCATACCCTGCCCCTTAATGGGAAAGACAGGGCACCAGGGCCTGCTGAGACCACTGCAGTCTCCCAGGTACCCAGAACTGCAAGCAGGGCCTGGGCTTCTGCCCTGGAGTGGTGAGCCCTCAGGAGCGACATGGGAAGAAGACTCCTCCAGGGCTCTCAGAAGAACCTGGAGCAGCATTGTGCCTGAAGCGCAGTGTGAAGCCTGAAATATGCAACAGAAGAAATATATCTCTATCTCTCTCAGCAGAGCCTCTTGTGTTTTTCCTCCTGGGTGTCAGAGAGCCAGCACTGTTGGGCCATCTTCTAAAAGTTTTGGCTGGCACTCTGGCAGAAGGTGGAGGGTCTAGTTGCCCCAGAGTGAGAACAGTTTAAAGTCCCATCCAAGAGCCAGAAGGGACCCAAGAACCCATAATCCAGATCCCTCCTTTATGAGGGGTAAACAGGCCCAGAGAGGCTCAGAGACTTCCTCATTGCCACC EMBV3_33298 GGAAAGGTCACCCAGGCTTTGATACTGGGAAATTTTCTTTATGCTGCGTCATCGCTGTGC Gene GeneID:527607|EFTUD1:XM_002696606:100_cdna Constitutive 2 NULL GeneID:527607 21 GENE EFTUD1 NULL elongation factor Tu GTP binding domain containing 1 EMBV3_19596 ATGCCCCGGTACTGTCTCTTTGGGGACACAGTCAACACTGCCTCACGAATGGAGTCTAAT Gene GeneID:533048|NPR1:XM_002686000:361_cdna Constitutive 0 NULL GeneID:533048 3 GENE NPR1 NULL natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A) EMBV3_27167 AACAAGACATGCAAAAGAAGTTTAATTCACGTAATGACTTCAAAGACAGTGGACATTAGG Gene BVV0101_014777 + 0 NULL GK000009.2:92570395-92730339 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18171 CACCTGCGGGAACTTATATGACACTTAGCAACGCAAAGATGATGGTGATTTGCTGGCTGA Gene BVT0102_208582 - 1 EMBV3_18432 GK000013.2:39902059-39903413 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01419 GTGAGGTCATCCCTTTGCATTTGGGTTGTTACAGGTTTCATAACGTGGAGCCTCACTCAG Gene BVV0102_243968 + 1 EMBV3_41636 GK000011.2:99573251-99576790 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40988 CTGCCTTGAGCCACGAGTATTTTAGTGACCTACCCCCACGGCTATGGGAACTGACTGATA Gene GeneID:784403|CDK14:XM_002686644:31_cdna Constitutive 0 NULL GeneID:784403 4 GENE CDK14 PFTK1 cyclin-dependent kinase 14 EMBV3_24944 GGAGACTTAACAATCCTTCGTGACTAGAGCAGGAAAGAAATACAAACCTTCATTCCTTCC Gene GeneID:533248|CCDC88A:XM_002691328:481_cdna Constitutive 0 NULL GeneID:533248 11 GENE CCDC88A NULL coiled-coil domain containing 88A EMBV3_24028 GGAATTTAAGTCTTGCTACCCCTTCCCCCCACCCCTGCAATCTAAGCCTCTTTCAGCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29778 TGACATCAAGACTGCGTTCAGCGACTGTGCCTCCACACCACCAATCCTGGGGGCTGGGTT Variant GeneID:525394|ARFRP1:NM_001037607:1156_cdna 526^715 2 EMBV3_30852 GeneID:525394 13 GENE ARFRP1 MGC134154 ADP-ribosylation factor related protein 1 EMBV3_15463 GGGGCGGGAATAGTCCGAATTATCCAGGTGCGCCTAATGTAATCAAAGGCTCTTATGGAG Gene BVV0102_263914 - 0 NULL GK000019.2:9852101-9887798 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27751 TACCACGTCCACGAGTGTGTTTAATCAGCACCAAGTCGATGTGGGAAGACGGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_20861 GAGGAGATGCCCCTCTGGAGTGTGTGGACAGGAAGGTCTTACCGGATTTTAAGTACCCTA Gene GeneID:282133|ADORA1:NM_174497:22_cdna Constitutive 0 NULL GeneID:282133 16 GENE ADORA1 NULL adenosine A1 receptor EMBV3_00294 TAGCCCACGCGGCCTTTTCCGCTGCGCAGCATCGTTCTTATATGCGATTAACAGAAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04345 TTACAAGGGATGGGTGAGAGTAACTGTGCTTGGAATAGAAAAGCCCTCCTGCACCGAGAC Gene GeneID:522230|C13H20ORF7:XM_002692036:36_cdna Constitutive 2 NULL GeneID:522230 13 GENE C13H20ORF7 NULL chromosome 20 open reading frame 7 ortholog EMBV3_22170 CGCTCCAGATGTGTACTCTTGCTACTGCCAGAACACTGAATTCTCTAGCGGAAATGCTGC Gene BVT0102_159887 - 0 NULL GK000021.2:6102477-6153518 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120422 TCONS_00120423 TCONS_00120425 TCONS_00120424 1 XLOC_073168 Coding TCONS_00120424 XLOC_073168 Coding Coding ASB7 21:6150278-6206080 j TSS89947 4407 1 TCONS_00120424_2 116 5 0.921112524865146 0.000162628579169976 0.000763182660110367 0.0001084086514982 3.93539694159246e-06 7.85824481776573e-05 2.9949442236542e-09 1.09273515465672e-05 1.90536144457536e-05 0.000265481196092957 0.000257377149431333 4.64816568660493e-09 2.94912218706193e-05 2.25955333722895e-07 7.8347111165516e-10 0.000134851782970801 0.00107876340040462 0.00150753752300133 0.000758717861609031 8.89989874727673e-05 1.45110586750008e-08 1.423035343334e-05 0.0011896808942718 0.000380540485574138 0.00159844344557118 0.000162542347506093 5.09021189713691e-05 5.13361911644273e-05 1.16661837140859e-05 7.46640048997494e-05 0.00023431801579341 XM_005221718.1 ASB7 PREDICTED: Bos taurus ankyrin repeat and SOCS box containing 7 (ASB7), transcript variant X1, mRNA. 0.0 2212 100.00 0.277966870887225 NM_198243.2 ASB7 Homo sapiens ankyrin repeat and SOCS box containing 7 (ASB7), 0.0 3124 80.81 0.759246653051963 TCONS_00120424_2 sp|Q9H672|ASB7_HUMAN ASB7_HUMAN Ankyrin repeat and SOCS box protein 7; 3e-46 155 92.41 0.672413793103448 5 noncoding 0 0 0 0 -0.0439643113219594 0.794055931717918 0.0049435929298762 0.913238515058077 CCTGGCGCCCCGGCGGCCGGCACTCCGGGCTCCGTGAGAGCCAGGCCCTCGCCGCCCCGAGCCCTCCCGGGCCCCTCAGTGGCCGGGCGCCCCCGGCCAGGAGCGCGGCAGCCCCCTGCCCCGAGCGCTCGGACCGGGGCTGCCCCCCGCCCGCGCCGGGACTTCCTCCCTGCACCCCTGCCCCAGGACGCTCGGCGGCCACTGCCGCCGCCTCCGCCCGGCCGGGCCATCTGGATGCTGGCAGGCTGGGGCCGGGAGGCGCCGCGGAGGAGCAGGGACAGCCGGGTCCGGCCCTGCCCGGGCTGTTTCCTCAATGGAGAAGTTGGTGAGTGTGGAGGCGGCTGGAAGAAGGAAGGGAGGCAGCAGCTGAGGAGACAGGTGTGAGCTGGCTGGGGGGCGAGCGACGGCAGGAGAGGGTCTACCCACCCGCCCGAGCAGCCGCGGAGCTCTGACCAGCTTCCACCGTCAAGGTTCAGAAAGAGTTCATTAACACCAGAATCTGGAGACACTCTAAGCCCCCACTCAACAATGCTGTATGTGCACAATGATTATTAGGCAATCCACATATCAGGAAAAGGGGCATTCTTTCATAAGGCTGATCCCTGTGACCTAATGAATCCTTTGTAAAAAAAAAAAAGTGGACTCAGCTAGGATGTTACACCACCATTGTCGAAGGAACCCTGAACTCCAGGAAGAGTTGCAGATTCAAGCTGCAGTGGCTGCTGGGGATGTTCACACAGTGCGGAAGATGTTAGAGCAAGGCTACTCTCCAAATGGCCGGGATGCTAATGGCTGGACCCTGCTTCATTTCTCAGCAGCAAGAGGAAAGGAAAGATGTGTTCGAGTATTTCTAGAGCATGGAGGACAGCCCAGAAACTTGCAGGACCTGTGCCGAATTAAAATTCGACAGTGTATAGGCCTTCAAAACCTAAAACTACTTGATGAACTACCAATTGCCAAGGTCATGAAAGACTACTTAAAACACAAATTTGATGATATCTGATACACAGAGAACTGTGAGCAAGATTAAGAGTTATATTCCAGATACTTAAAAGGCTTTTTGCCTTGCACAAAGTATATCCTATGCAATTTCTGATTTGCTGTGAAGTCAGAAAGCAGGTATACACTTACAGGTTTTTTTTTGTTTGTTTGGTTGGTTTTCATTGTAGGGGGGAGATTTTTTTATACACACACACACACACAGACACACACACACCACATGCTTGAAGGTCTTAATTTGGTTTCTTGGTCCAAGTTTAAGAGGTCCAAGCTTTCTATACAATATTGCATTTAAAACAGTTGTTTTTCCAAAATGACACAAGCAGGTTTGGAGTGGAGAATTGACCCTTTCCAAATTTACAGTTTCATTGGCGTGCACAATATTATAAACCAGCAGAGCACTTGTTACAGTTTGGAGGCACAGTTTCACCCAGGGCATCCAGGGTTCTACTGGAAAATGCCCTAAGAAATTTTTTAAGTAATGCTGTCACCTCATTCATTTTAATGAGTACAAATTGGCTGTTTCAAACTGTTCTTTTTCTAATTAACGTAGCTTTGGATGACTTAAACCCAGTCCCTCTGCTTTTTGTTGGTGTGCTCGTTTCTAACTTACTTTTTTAACAGCTGTAGTACACTACCTGGAGACGTTGAGTCTCAACTTCTGTCTCTAGTTGAATTGTGCTTTTAAAACAATTAATGGGAAAGAAAATAACTTTATAAAGCCCGTGTATTCTGTTTTTAAAATAGTGCCTCCAGTGCAATACTCTTTCTGGTGTATTTTATCCATTATTTCACTTGATGTTCCTCATTCCACAGCTGGCTTTGACATGCCTGTGAGAACAGGAACTGCCACTTTAATTTTAATTGCAGAACATAGAGTCAGTTGCAATTTCCATTTTAAGCTTTGTCTTTTACTTCAGTTTAAGCAGAAAATTTCATGTCCTGGTGGTAGAGTATTCCTTAAAAATAGCCAAAATACTGTTAAATCATTTGGCTTTAATGGATAAATAATTTGGGATGGTTTCATGGTGTTTATTTCTTCCCAGTTGAAATAAAATGTCTAAAGGGTAAAATTTATAATGGGTGCACATTTGTAAGTCTGGTTAATTTCTAATATGCTAATTAAGCATTTCCTATCTATTTTAAAGTTATACACAGAGACGCTCTTCAGAACAGTTATTTTCTGGGTTGATCGGCATATGTTTGCAGTATACACATAACTATGATAAAGTGTCAGTAAGAGTGGTTCCGGAGGTGTTAGGAATCTGTGGTGATGCCCTTGGGAATGAGCCCTGTGCTTGATGTGACATTGTATTAGTTCCAGAAGCAGCTTTAAAACTATCCCGGTATTGTTCTTAGTGCTTTGGGAAATTTCAGAATATTTACACACCAGTAATAAATTTATTATCAGAAGTGTACAAAATAAAGGGCTTCTCTTGTCTGAGTTTCTAGTTTTAAGTCATCAAGTATAAAGTTATTTCACCTGAAAAGTATAACTAAGTAGAATTAGGAATCTCCTCTGGCTTTATCCTTTTTCAGAGCCGACAGTGATATTTCCTCAAGCACAAAATTTATTCTCTTGGATGTGGAGTAGCTCTGGCATCAGATGCCTGCTCTGCTGGGCCTGGGCTGGGAGCAGGTTTCTGAACAGTGGGGAGCTTCGGGGAGAGGGTGATGTGAGGGATCACGGATGGGGTACGTAGCCTCTTCCGCAGGGAACCACTCAGAGTGTGGCCAGTTTTGCAACCATCCAAAAACTGTACTGGGATGTGATAGATAGAAATGGGTGTTCTGACTTTTTTCCCATAAAAAATATCTCCAAAAAGTCATCTTCTGAGAGAACGTCCTTGTGAAGCTAGGAGCTGAGCTGTGTCCTCTGGAAACCGATAACCAGGTCAGAGCTAAGACACACTTTTGGCATCGGGGACCTGGCATGGCCGGAAGTGGATGGCGTTGCTGCTCCCTGAACCCGGGCCAGGGAGGCAAGGACATGGGAAGGCAGGCAGAATCCTGTACTTTGAGCAGTGATGTTACTGTTATGTCTGCACAGGGCTCATCTCCTCATGTGTCTATTAATTTATTCAGTTAGTTTAAAATGATTTTCTTTCCCCAGCCATTCAGAGATCTCCAAAACTAAGTTCACCACTGAGTTAGAGTCAGGAAATTCCAAGTAAAAAGATCAGATGAAGGTAAATTCTTTGTTCTATATTGCTGCTTAGACTTCAGGAAAAAAAAAAAAAATTATGAGAGTTCTTCCTGGAATCAGAATTTCTATTTAATGAAGAAGTGTATAATTCCATTATTTGTTTGAGGTTTGATTTTTCTGGAAACTTGAAAAGAATGTTTTATTTTTGTTGTTACTAGAATCCCAATCACATATCATCTTTAACAATAACTAAAATGTCTCAAAGTCGGTAACTGGTGGAATACAGGGATGAATGTGCAGGTCTGCTCTCCAGTTTGATTGGCAGAGAAGCACTCTGTAGTAACATGAGAACAAATGTTTTCAGAAAATCAACTGGTTTTTCCAGAATCTTGACTGAAATGTTCAGAATAGTATCAAATTTGTCACTGATCCTTCTATGTTCCTTTTGAAATTTATTATTTAAGCCTGTTACTAAACCTTTATAAAAATATATTTGGCAAGTACACCAAAGACACCAGCTCATAAAAGATTATGATCATTAATGAACTGCAAACCTCATCTTTTGCAAACAGAAGATTTTTTTTGTGTGTGTAAATATTTGTGTTTATAAATGTACAGCAGAGTAAGGGTGTTTTTTAGATTATTTAATTTCCATATTTCTAAACTATTTACTACAGAATAATCCACACTTGTTAGTTTGGAGGACTTGACAATTTTGTTTTTTTAATTCATTATCAGTCATGCTTGGAGCAGCATTTCCGCTAGAGAATTCAGTGTTCTGGCAGTAGCAAGAGTACACATCTGGAGCGTGAGGGAGTCTAGCTTGATTTGTCAGATACACACCCTACGAGACGAGAATGTGTAGTTTAATTACCACAGTGGACCATACAAAAACTGAGGTTCTAACTTTGGTGCAGAATTGCTCATCAGCCCAGAGTGTCATTGGGATGAGGCCCTTGGCCCACAGATTAGCTCTCATGTAACTCCTAGTGTGTTATATCATAATGTATTTTGTTCTTCCTTTGTAATGTAAGTTTTGCTTTGGGTCAGTTTGAATTAAAAAAAAAAAAAACACTTAAATCTGGTTTAAAACATATTGGAACTGTGTTTTATTTCTAGTCTGCCTTAACTTTTTAACACTTCCAGCTATTTGGTCAAAAGAAAGTGAACTCTGTCTTTTATTCCTCAGCATTTTAGATAATTAAGAATTGGGTAAGAATGTAATACAGGAAACAGCACTGTTTCAGATCGTTTAAGAATCC EMBV3_42477 CCTGTCAGGCCTCTGCCTCCTGCCTTACAAAAACGTCAGACTGAACTTATCAGAATTAGA Gene GeneID:280868|MTTP:NM_001101834:1_cdna Constitutive 0 NULL GeneID:280868 6 GENE MTTP MTP microsomal triglyceride transfer protein EMBV3_22615 CCAAGTTTCTTTCCCAGGACCAAATTAATGTGGAGGATCTCTTCAGGGAAGCAGGTATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29295 TGGATTCCCTTACATGATGTTCTTGAAGACTGGTTTCTCTATCACACTTCTGCCACCTCC Gene GeneID:538706|COMMD10:NM_001083489:14_cdna UTR3_Alt 2 NULL GeneID:538706 7 GENE COMMD10 MGC137858 COMM domain containing 10 EMBV3_19336 TCTCTCTGCTTTGGTACGGGAGGCTTCTATCTGTGCCTTGAAGCAGGAAATGGCAAGACA Gene GeneID:532708|NVL:XM_002693992:278_cdna Constitutive 0 NULL GeneID:532708 16 GENE NVL MGC166259 nuclear VCP-like EMBV3_31063 GTCAGTGCTGATGCTAATGACTACGCCTCTTGACCTCTGCCTCCAGTCAATCCTAAAGGA Gene BVT0102_126493 + 0 NULL GK000019.2:59494898-61185603 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098082 1 XLOC_058421 NonCoding TCONS_00098082 XLOC_058421 NonCoding NonCoding - 19:61058539-61074749 - TSS72532 299 1 TCONS_00098082_1 50 0.391304347826087 3 0.981738540317108 4.65299952038383e-11 3.01332864604185e-14 5.98926895157317e-11 0.000785625577546037 7.24351287674588e-19 0.00103300753150622 2.25577172046509e-10 8.4952276817472e-05 0 0 0 0 1.40491940703997e-09 0 0 0 0 0 4.58514617230984e-18 9.39393662066823e-21 3.66709516069675e-05 0 0 0 8.29129971741154e-10 0.00123182681769738 1.64813416301467e-07 0 0 0 XR_227418.1 LOC101903471 PREDICTED: Bos taurus uncharacterized LOC101903471 (LOC101903471), 1e-31 140 87.39 0.387959866220736 0 noncoding 0 0 0 0 -0.455114659670841 0.0448277722702107 -0.0472099024148804 0.338122276591402 GGTCCTGCCTGTCGTCCACAGCGACCAAGATACCTGAAAACTACTGTAGAGGAAGGAGGTTTGCAGTGCTGAACAGAATGCAGGTGTCTAGAGCTTTGCGATCCAGACAGTCTGGTACCACTTCCTGAGAAACCTGGCAGTCAGTGCTGATGCTAATGACTACGCCTCTTGACCTCTGCCTCCAGTCAATCCTAAAGGAAGTCAAGCCTGAAGATTTCCTGGAAGGACTGAAGCTGAAGCTCCAGTCCTTTGGCCACCTGATACAAAGAGCTGACTTACTGGAAAAGACCCTGATGCTG TCONS_00098083 s 3' 126951 TCONS_00098083 s 3' 110855 EMBV3_21382 CCATAGAGGCAGTGCGGTGTATTTTTTGTCCTGCTATTCTCCACTGTAAACTACCATCAG Gene BVT0102_072855 + 0 NULL GK000016.2:43486459-43786498 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06762 CCCAACCCAGACCAAATGCAAACAACCGAACTGCAGCTTCTATGGACACCCTGAGACAAA Gene GeneID:525579|OTUD7B:NM_001144093:112_cdna Constitutive 0 NULL GeneID:525579 3 GENE OTUD7B NULL OTU domain containing 7B EMBV3_19671 GAAAAATCATAAACATTCAGTTAATAACCCTCCCACTTCAGATGGTGCTGCCGCAGCAAT Variant GeneID:508918|SCP2:NM_001033990:31_cdna 656^742 4 EMBV3_41716 GeneID:508918 3 GENE SCP2 MGC127405 SCPX sterol carrier protein 2 EMBV3_29560 CAAATGTTTGTGAACAGAATCCTAGCTCCCTGGTCCCCAGGCCTTTGAGTCAGCAGAATC Gene GeneID:512832|CASS4:XM_002692272:1605_cdna Constitutive 0 NULL GeneID:512832 13 GENE CASS4 NULL Cas scaffolding protein family member 4 EMBV3_03696 AGCCGGGCTGTGGACTCAACGATGTCTTGGGGTCGATTGCATATGGAAGTGAGTTCCTTA Gene GeneID:509808|LIPG:XM_002697766:307_cdna Constitutive 0 NULL GeneID:509808 24 GENE LIPG NULL lipase, endothelial EMBV3_38674 GGCTCAGAGGTATAAAGACATTTGCCCAAGGATAACTCAGCCAAATCTTGCCCAGTTCAG Gene BVV0102_267330 - 1 EMBV3_24549 GK000003.2:99957409-99996595 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09633 GAAGTAGTGACATTTCTGTGGGGCCTAGAGGACAGGAGTTCAATTTGCAGGAGGAGGTGT Gene GeneID:509038|IL20RA:XM_002690260:44_cdna Constitutive 1 NULL GeneID:509038 9 GENE IL20RA NULL interleukin 20 receptor, alpha EMBV3_20254 AGGATGTGGACGTGGGCTTTGATGGTGGCACTGATCGCATCTTCCTTGTGTCTCCCATCA Gene GeneID:540740|KCNJ14:XM_002695110:586_cdna Constitutive 0 NULL GeneID:540740 18 GENE KCNJ14 NULL potassium inwardly-rectifying channel, subfamily J, member 14 EMBV3_19075 ATGTTTCTTGCATTGGCAGGTGGGTTCTTTACCAGTAGTGCCACATGGGATGGCCTTGAC Gene GeneID:532777|CLIC2:NM_001081727:11_cdna UTR3_Alt 3 NULL GeneID:532777 X GENE CLIC2 MGC148419 chloride intracellular channel 2 EMBV3_04966 AACTTGGGAACAAAGCTGGTAACTGAACACAGGTCTCTCTGCCTCCCAAACTGTGCTCTT Gene GeneID:537692|MBLAC2:NM_001099079:15_cdna UTR3_Alt 2 NULL GeneID:537692 7 GENE MBLAC2 MGC152119 metallo-beta-lactamase domain containing 2 EMBV3_09076 CAGCACGCACACGAAGGAGAAGGAGAAGTTGCACGCGTGTGATGACTGTGGTCGCCGATT Gene GeneID:539836|ZNF689:NM_001083746:368_cdna Constitutive 0 NULL GeneID:539836 25 GENE ZNF689 MGC149036 zinc finger protein 689 EMBV3_24645 AGCGCACCCGCTCGATGCTTCTCTTCGCCAACGTGAGCGCCCGGCATTACGGCAACTACA Gene GeneID:786369|IGLON5:XM_002695227:44_cdna Constitutive 0 NULL GeneID:786369 18 GENE IGLON5 NULL IgLON family member 5 EMBV3_26652 GCCTTTTCTTCATGCTGGTGACTTCAAAGTGTGGAGGGCTTCTGTTTGCTGGTTTGGTGG Gene BVV0102_167397 + 0 NULL GK000023.2:51453572-51549720 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138347 1 XLOC_084555 NonCoding TCONS_00138347 XLOC_084555 NonCoding NonCoding - 23:51461649-51463909 - TSS103637 2260 2 TCONS_00138347_3 65 1 0 0.000776607399542812 0.00114712213277671 0.00024977649891157 0.00087083408643934 0.000685961822759399 0.000321301559123438 0.000180628269599295 5.23425844418818e-05 0.000635399909682173 1.82057568390274e-06 0 0 0.00015362102755706 9.78260748516523e-05 0.00021274658308811 0.00157768221851724 3.67306518156747e-05 4.44086838164055e-05 0.000713919173295115 0.000448669569543574 0.000184024308516161 0 0.000133957364639142 0.000304138252497057 0.000830803342312335 0.00110981713135887 0.000764800611247933 0 2.14805737105277e-06 4.52248367541337e-05 NM_001453.2 FOXC1 Homo sapiens forkhead box C1 (FOXC1), mRNA. 0.0 2286 82.00 0.999557522123894 0 noncoding 0 0 0 0 0.0494263084586041 0.73282083946254 0.0270190344698889 0.760915465929311 TTTTTGACTGGAAGTAGAGTGTATTTATTTGCAGCAATCCTTTAACAATGATCAAATTTTGACAACAAGCAACAGCAATTACTGCTAAGTGTTGCCCCTAGATCGAGCGGCAGATAGCAGGGAACTGTATTATCTCGAGAACAAACGGAAAGGCCCTGAAAGTCTGGAATCAAATCGCAGCTCCCCAGAGTCTGATCGACAGGGCAGATCACCCAAAGATAATGAATTTATTACATTTCCTGGGTTATTTACAAAAGGAGGGGCTAGCGGGCTGCCCCATAAGTTTAACTGTAAATTAACAAGAAAAACGGGACTGAAAAGAAACCGCCTGGATTAAAACACCCTGCTTCGCGCTCCTTCCCTCTCCTTATTGCTTTAAATCTTTTCCCCCAAAATAATTGTTCTACAAGCATATCTTCTAAAATAGTTTTCCCAAAGATTAAATATCCCTTTCCAACCCGCAGTACATTAAAATAAAAATCAATCCTACATTGGACATGAAGGATTGTAGATGTGGATGACTTATATACACACATTTAAAAGCTAGGTTTTTTTATCCCCCTCTTAAAATGGAGTGAAATTAACAGGAAGAAAATTCATCCAGCATTTGGCTCACAGGGATGTCTGGTATGTACGACAGTTTTTTAAGTGATACACAAGCCAAATATTCAAATGTGTATCTGAAGGCACAGCTACCTCTCCACACACAGGTATCACTGTGGTGAGACTGCCGCTGATTCATGGGCTTGAAATTTCCAAATCCTGTTGTCATTACTGAGAAAATGCATTTGTGTATATGCCAACTCAGATATGTTTAGGAAAATCTCTTTTTACTAGCCACAAAGCAAGCTGACTATATAGTACTTTTGCAAAAGATGCCGCAGGAAAAAAATAAATCTAAACAAAAAGAGACTTACACGCGTAATTTGACCAGGAATAGTCAGAGGATGTCTCTACTTTTTTTTTTCAGAGATTTAGGAGGAGAATTGGTAATTTCTAGTGTTTTAATCTCTGAAATCTTTTTCTCATAAGAATTAAGGCTGTATTAAAGTATCCAGACATATAGGTCTCATTCAAACTGAATGGTAATTTATTAATAAACAATGAATATGCTCAACAAAAAGAAAGCAAAGATGATAGAATAAGATTAATACAGTTTCCCTTTTCATAATCAAAAAAGCACAGTTTAAAGTTTCAGGCAATTTAACGTCAGGTTTTGGAAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAATTACTATGTTGCAATTTACATTTTAAAACAAGTCCAGGAATAAAAAGAAAGCCATTTCCATGTACGGGGGACTTCCTCCCTCCTTTCAATAGAGGATAAAATAATATCTTACAGGTGAGAGAACAAGAGACAGGGCAGGAGGAGGAGAGGTGTTCTCTGAAAAGAGGAAGAAACTTACGTGTTATCTGGAGTAACACTGCCCTTTAACAAACCATGACTCTGCTGTCTCTGTACAAAACAGTTTACGGTTCTGTTTGTTTAGATAAAGCAAAGTGGAGGTGGCTCCGAATCCATCTTCTAAGAGAAGAAAGCCTTTTCTTCATGCTGGTGACTTCAAAGTGTGGAGGGCTTCTGTTTGCTGGTTTGGTGGACGTTTTACGCACTGGGTTTTTGGTTTCGCTTTTGCGCTGAGGGTCCTTTTGGCTGATCCTGCTCCGGGGTTCGGTTCGGTCAGGCTGAGAGGCAGGCGGGGCGGAGGCGGGGGTCAGAACTTGCTGCAGTCGTAGACGAAGGCCCCGGACGTGCGGTACAGGGACTGGCCGGAAGGGAAGGCCATCTGACAGCTGCTGTTCCCATTTACCGGCGAGTTGTTCAGGCCGATCCGCTGCGACTCAAACATCTCCCGCACCGAGTGGAAGTTCTGCTGCTGGCCCGGGTAGCCCGCGGCCGCCGCCGCCGCGCTGGCCAGGTGCCCCAGGTCCCCGCCCGCCTGGTTCAGGTACCACGAGGCCAGGCGGCCTTGGTGGGCTGCGGGGTGGTGGCCGGCCTCCTGGCCGCCGCCGCCGTGGCCCAGGGACGAGGAGCTGCTGCTGGTGGCCGGGGGCAGGGAGTAGTCGGGCAGAGGGTCGTCCACCGAGGAGCCTCCGGCGCCCGCCGGCGCGCCCTGCACGTGGCCGCCGCCGCGCTCCCGGGCCGCGTACAGGCTCATGGCCTGCAGGTTACAGTGGTAGGTCCCGGCGCCCCCCGCCCCGCCGCCCGCGCCCGCGCC TCONS_00133703 TCONS_00133706 . 3' 8075 TCONS_00133703 TCONS_00133706 . 3' 10334 EMBV3_11046 GCTACATGGCTGTAAGGCTAAAAGATCAAGATTTGAGGGATTCAAGGCAAGAAGCTGCCA Gene GeneID:510511|NOL7:NM_001034384:68_cdna Constitutive 1 NULL GeneID:510511 23 GENE NOL7 MGC128603 nucleolar protein 7, 27kDa EMBV3_18729 AGAGGTGCTGTCTCACTGTTGGTTTTCCCTTCACAGGGGGCGACTTAGCTTCTGTACTCT Gene GeneID:539447|C11H9ORF9:NM_001101193:178_cdna Constitutive 1 NULL GeneID:539447 11 GENE C11H9ORF9 NULL chromosome 9 open reading frame 9 ortholog EMBV3_28164 AGACCATCTGGGCAGCTTTCCCACAGTGCTGCTCCATCCGTTCAACAAGTGATGCTACCT Gene GeneID:353348|SYNE1:XM_002690344:5_cdna Constitutive 0 NULL GeneID:353348 9 GENE SYNE1 MGC160118 spectrin repeat containing, nuclear envelope 1 EMBV3_17027 ACCCTACTTCATCCAGCCAATAGGAGCCAAGTATCAGTACCCATCTCTGGACCAGCTTGC Variant GeneID:515063|NDRG2:NM_001035304:58_cdna 124^431 1 EMBV3_34965 GeneID:515063 10 GENE NDRG2 MGC128884 NDRG family member 2 EMBV3_29045 CAGCGTGTGGTTTCTCAAGAGGCCAGAGCGGCATTATGGGCTGATTTTTATTACTGGGTT Gene GeneID:513410|HNRNPAB:NM_001040522:20_cdna Constitutive 0 NULL GeneID:513410 7 GENE HNRNPAB HNRPAB MGC128167 heterogeneous nuclear ribonucleoprotein A/B EMBV3_05545 CACTTTGGGTCACCTTCCTCCTTACCCAGTATTTTGGAGTCAATGAGAGGTTTGACCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42370 GATGACATGCTGGCGAGAAGACAATGGACACACCAGTGCATCCTGGGAGTTTGGCTTCAA Gene GeneID:783343|LOC783343:XM_002695666:2_cdna Constitutive 0 NULL GeneID:783343 19 GENE LOC783343 NULL similar to ULBP27 EMBV3_09430 TAGCCATCCTGGGCCTCCTACTCCTGCTTACAGATGGTGTAACCTCTTACCATCGAGTGA Gene GeneID:614846|LOC614846:XM_002683662:2_cdna Constitutive 0 NULL GeneID:614846 7 GENE LOC614846 NULL similar to Hepatitis A virus cellular receptor 1 N-terminal domain containing protein EMBV3_11505 TCTAGAATGGGTCTCAACACCACAAGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGC Gene GeneID:613498|GSTK1:NM_001079616:712_cdna Constitutive 0 NULL GeneID:613498 4 GENE GSTK1 NULL glutathione S-transferase kappa 1 EMBV3_30516 GAAAAGAAGGAGGTGACGTGTACAATTAAAGTCTCCAGATCACACTAAGTTTGTGGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19586 TCTTAGTGCAAAAGACACAGCCTCAGAATGGCCAGGTGGAGTGCACAGAGGGTGAGGTCT Gene GeneID:536167|SH3TC2:XM_002689285:110_cdna Constitutive 0 NULL GeneID:536167 7 GENE SH3TC2 NULL SH3 domain and tetratricopeptide repeats 2 EMBV3_27410 GACCATTTATAACCAGGACTTCAAGACCAGTGCTAAGAACTATGACCTGGAGTTCAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38999 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16087 CCTTCCAGCTCCTGGACCTCATCCTGGCCGATATTCCAGGCCTACCTGGCCTTCCAGGAG Variant GeneID:538683|SYNGR4:NM_001046436:346_cdna 518^657 1 EMBV3_20946 GeneID:538683 18 GENE SYNGR4 MGC134137 synaptogyrin 4 EMBV3_27371 GTACTCCACCATCTTCTAAATCCAGTTCAAATGGCATCTATACATCCTGTGTGACAAAGG Gene GeneID:100137875|LOC100137875:XM_002685670:446_cdna Constitutive 1 NULL GeneID:100137875 2 GENE LOC100137875 NULL similar to MGC127538 protein EMBV3_39479 GGCGCGGCAGATGTGTGCATTCACTGTCAAGGCCAAGGGGCACGTATTTGTGTGTTTACA Gene GeneID:100296211|LOC100296211:XM_002694527:458_cdna Constitutive 0 NULL GeneID:100296211 17 GENE LOC100296211 NULL hypothetical protein LOC100296211 EMBV3_09659 CAGCTCACAAGAGAACTGGAGGAGCTCAAAGAGATTGAGGCGGATCTCGAAAGACAAGAG Gene GeneID:509117|SPC24:NM_001075391:14_cdna Constitutive 0 NULL GeneID:509117 7 GENE SPC24 MGC140368 SPBC24 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) EMBV3_01394 TCACCTGCGCGTGCTGCTGCGCTACAAAGTGGGCGACCAGGAGGAAAAGACCAAAGACTT Gene GeneID:540228|PRMT6:NM_001014962:170_cdna Constitutive 0 NULL GeneID:540228 3 GENE PRMT6 HRMT1L6 protein arginine methyltransferase 6 EMBV3_10766 TCAACAAGTTCAGTCTCGGGGTTGAGGAAGGTTCAAGTGATGAGGAGGAGCTGCCCAAGT Gene GeneID:100301416|LOC100301416:XM_002700308:9_cdna Constitutive 0 NULL GeneID:100301416 X GENE LOC100301416 NULL similar to melanoma antigen family B, 4 EMBV3_16062 CACGGAACGATGTACCCTTAGGAAGGAATGATCACAGACAGATCACCACCTGGAAGAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05620 GTGCAGCGCAACTATGGCTTCCAGATCCATGCTCTCGGACTGCAACAAGGAGAACACGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00219 GCTAACCTGAAAACGCATAGCCGCATCCATTCGGGAGAGAAGCCCTATAAGTGCGAGACA Gene GeneID:100138731|BCL6B:XM_002695780:283_cdna Constitutive 0 NULL GeneID:100138731 19 GENE BCL6B NULL B-cell CLL/lymphoma 6, member B (zinc finger protein) EMBV3_26667 AAATCTTGGAATGGTTCTCTTTTAATGAAGGTGCAAAAGGCAGTGGAAGAAGAAAATTGC Variant GeneID:616031|GK5:NM_001035473:75_cdna 360^491 1 EMBV3_37884 GeneID:616031 1 GENE GK5 MGC40579 glycerol kinase 5 EMBV3_43740 GCTATAAAATTTAGGGTGGTGGTTACAGGGAGCTCAGTAGTGTCCAACTCTTTGTGACCC Gene BVT0102_307540 - 1 EMBV3_15162 GK000016.2:35733188-35747261 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00072289 1 XLOC_044058 NonCoding TCONS_00072289 XLOC_044058 NonCoding NonCoding - 16:35742266-35743719 - TSS54133 1453 2 TCONS_00072289_2 55 0.5712319339298 1 0 1.87277296870741e-05 0.000262794276594234 0 0 0 0 2.00677811538222e-05 0 1.0860468265539e-05 0 0 4.42962296671809e-05 0 0 0 0.000109063435294202 0 0 0 0 0 5.10713932799706e-05 5.68247187645668e-05 5.76897805791345e-05 4.76839746000125e-06 9.69782165177671e-06 0 2.64423331384988e-05 6.68220474495086e-06 0 XR_226704.1 LOC101909678 PREDICTED: Bos taurus uncharacterized LOC101909678 (LOC101909678), 3e-41 174 90.62 0.0867171369580179 0 noncoding 0 0 0 0 0.0487520779344244 0.644778660189382 0.0194805747987925 0.699183114748278 GTTGGGGGAATGTCAGCAGAGAGACAGAAACTGTAAGTTAGAAATACAAGAAATAAAAACAAAAAGCAGAATAACCCAGATGAAGAGTCAGGGAAAGAATTGGTTAACTAGAAAATGGGTTCATAGCAATTACCCAAACTGAAAAACGGAGTAGAAAGTAAACGTAACAGCCCTAATAGCTATGTGACAACTTATAGCTTTCTAATGTGTGCAGCTGGAACCCCAGAAGAAGAGAGAATGGGACCTATATAGGGAAGTGAGACCGAGTTCAATTTGTTGTCACTTTATCCCATCTTTTCCTCCTTGTACTTTCACTGTGCTTCATGTCTTTCAAGAACAGAGGTTGTCTGGTGCCGACTGTCCAGTTAACTTTTGGAAACGAGGATAGTTGCTGGATTCCGTGCCCAAGGCACAGGATGTGTATCACTGAATTGTGGCAGGGCCTATAGTCTAAGGTACGTATTTTAACATTTTTAAGAACAGTGTATACCTTAAAGTTGATGGAGTTTATTCCCAACGGTACATAAATTAATGATGCCTCTTACAATCATATTTTCAATTTGATGGAATACTATTAAAATAATATGATTTAAAAAAATTGTTGTATGGCAGAAACCAACACACCATTGTAAACATTTTAACAAATATTTACATAAATGAAAAAAACAGAATATGAAGGGCCACACAAAACAAGTAAATGGCCTAATAAATTAGAAGGCCACCATTTTACTTTCTGACATCAATACCCTAATAAGCTATTATGAGCAAACCTTGTCATAATTCGAGAAACCTGGGTTCAATCCCTGAGCTGGGAAGATCCCTTGGAGAAGGGAAAGACTATCCACTCCAGTATTCTGGCCTGGAGAATTCCATGAACTCTATAGTCCATAGGGTCACAAAGAGTTGGACACTACTGAGCTCCCTGTAACCACCACCCTAAATTTTATAGCTATCGCTTCCTTATATTTCTCTTATTGTCTAATCACCAGAGTGGGCCTCCCTAAATAATTTAGTTTTGTCCTTTTTTTAATATGGACTTTTCCTCTCCCTTTCCTTAAAATTTATCTGTTGAGAATCCAAAGGCATTTAATCTGTAATTTCTTGCTGTCTGAATTTTGCTAATTGCACACTCAGGTTGCAGTTCCCTATTTCCTCTGTCCTCTGTATTTTCTGCAATTCTGCAGTTGGATCCAGAGGAATGATGTCTCATCTCCAATCCCGTGGCAAGACTAGAGGATGCTGAGTTCTTTCATTAAGAGAAATGAAATGTCTAGTTACAATGTTAATAGCAGCTGACACTCTAAACCTAAATCCATTAATCCACTGGGGATTGCAAAACAGTAATATCTCTTTTTCATTGTTAGAGCACTAAAAAGAGATTTATCTTCTGTTTGGTAACCCACTGGTACAGTATAAAGATGGGCATTCCTTGTAACTCAGTTGGTAAAGAATC TCONS_00069084 TCONS_00069081 TCONS_00069082 TCONS_00069083 TCONS_00069085 TCONS_00069086 TCONS_00069087 TCONS_00069088 . 3' 514 TCONS_00069084 TCONS_00069081 TCONS_00069082 TCONS_00069083 TCONS_00069085 TCONS_00069086 TCONS_00069087 TCONS_00069088 . 3' 1966 EMBV3_01222 TTAAAAGAAGAACTTGCAAAAGCTCAGAGGGAAGCTCATAAGATGGTGAGAGAAGCAAAT Variant GeneID:533284|RAB3IP:NM_001046347:37_cdna 652^747 1 EMBV3_01688 GeneID:533284 5 GENE RAB3IP MGC137223 RAB3A interacting protein (rabin3) EMBV3_13582 GAGCAAGCACATTGTTTACTCACACCGTATTCTGCTCAACAGACATTAAGACAATGGGGG Gene BVV0102_198605 + 0 NULL GK000008.2:38823578-38875406 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42251 GGACTTACAGCAGAATTAAACCTGCATTTGGAATGAGTCGTGTTGTATAGAGACTCACGC Gene GeneID:539972|TMTC4:NM_001105629:26_cdna UTR3_Alt 2 NULL GeneID:539972 12 GENE TMTC4 MGC139344 transmembrane and tetratricopeptide repeat containing 4 EMBV3_41056 CTAGCTCATACCCGCCTCTCCCATCCTCTCACCCCAGTCATATTCAGTCTAGTGAACTGT Gene GeneID:616082|DUPD1:NM_001105444:408_cdna Constitutive 0 NULL GeneID:616082 28 GENE DUPD1 MGC160041 dual specificity phosphatase and pro isomerase domain containing 1 EMBV3_06363 CGTGCTCCATCCCGTACCGTGGTGTCCTCGCCTGTCTGCATTTGTTAGTGGTAATATTCT Gene GeneID:614259|DNAJC8:XM_002685752:517_cdna Constitutive 0 NULL GeneID:614259 2 GENE DNAJC8 NULL DnaJ (Hsp40) homolog, subfamily C, member 8 EMBV3_17100 ACCTCAAGAATTCCTGGGGATTTTTATTTCTTATTCCCAGATCCAGAAGGTTGTAAGTTG Gene BVV0101_042553 + 0 NULL GK000015.2:29957087-30007425 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060924 1 XLOC_036869 NonCoding TCONS_00060924 XLOC_036869 NonCoding NonCoding - 15:29971561-29995745 - TSS45469 781 3 TCONS_00060924_3 50 0.22663252240717 3 0.967828639953687 0.000440822138557192 0.000209317547660201 0.000265119703882697 0.000991711140103008 0.000412916015231392 0.000385439180153278 0.000615956412941561 0.000549700433778921 0.000187591798205994 0 0 0 0.000102880855851648 6.4032313790607e-06 3.73435801599909e-05 0 0 0 5.52796697546603e-05 0 0.000105844734450468 0 0 0 0.000161207994497352 0.000249493482961086 0.000312948246973318 0 0 0 XR_227825.1 LOC101902586 PREDICTED: Bos taurus uncharacterized LOC101902586 (LOC101902586), 3e-63 246 100.00 0.172855313700384 0 noncoding 0 0 0 0 -0.254203850931108 0.310672871048667 -0.107666564830063 0.0528048939677382 TACCTCTCGCCCACACTTTGTGGAGTCTTTCTCTCTAAATAAATCCACTTCTTGCCTATCAGTCTCTCACTGCATTATTTCTGTGATGAGACATCAAGAACCTGAGCTTTGTTAAGGCCTGAGACCAGAAAATCCCTATGATCAAGACCAACAATGTGCTTTCCCTTCTCTCCAGACCTGGTCCAGGTACTGCCAAAAAGATAAGTTGTGGCATGTGGGATCAAATCCAGGCCCTTCCATTGCAAGCTTAGCCCTTGGACCATCTGGGAAGTCCCAAGAATGCTGACTTTTAGATACTAAATATAGGTAGCATTATCTCTCAATTTTTAAGATGATTTTTTGGGGGCATTTATTTTGTGTTAACCTTTTAGAGTGTCATTCAGTGTTTTCTATTATCAAATGTCTGTATCAGATAGAGATCATGTTAACATGTTATTGACATACATAATCTTGTCACAATATGTTGGTTCATAATAATAATAAATGTGCATTTATTATTACATTGCTTGTTTGTAGCAAGCTTCTGAAATGTTTAGTATAACCTCATTACAGAGAACTGATTAAGACCACTCACTATTATTCAAAACATGTAAATAAAGTGTTATGAAAAATACAGAACAGTTTATAACCTCAAGAATTCCTGGGGATTTTTATTTCTTATTCCCAGATCCAGAAGGTTGTAAGTTGATAATTTTTGAAGTTGTTCATATTGTGAAGGGGTTCCTAATACTGCTATATGTTGTCATATGTGTTTAAATTTTTCTGTAATAAAAAGTAAAAC TCONS_00058741 r 5' 35240 TCONS_00058741 r 5' 11632 EMBV3_10600 GTAATAGCCTCTCGCCTCCAGTAGAGAAAGCCACCATAATAATGAAGATCCAGCACAGCC Gene GeneID:616184|LOC616184:XM_002692763:118_cdna Constitutive 1 NULL GeneID:616184 14 GENE LOC616184 NULL similar to AARD protein EMBV3_10425 AGGGACTTTGAGGCAGGTGTCCTTGAACTTGAAGCAATTGTGAACAGCATCAGAAGGAGC Gene GeneID:281535|TLR3:NM_001008664:4_cdna Constitutive 0 NULL GeneID:281535 27 GENE TLR3 NULL toll-like receptor 3 EMBV3_02012 AAAGCCCTTTGACACACAGAGGCTCTCACGCACTTGTCCCCACACCCGGCACATACATAT Gene BVV0102_177364 + 0 NULL GK000030.2:13926277-13966655 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246312 1 XLOC_150955 Coding TCONS_00246312 XLOC_150955 Coding Coding ELF4 X:13911522-13928955 j TSS184691 7017 1 TCONS_00246312_8 662 0.062989881715833 9 0.597980725103258 1.58647442143426e-14 2.67062893231015e-19 1.2604263916383e-14 1.16283499093776e-14 1.033391298743e-20 4.67487929191585e-17 0.000208937570283657 8.00651076773418e-17 2.08252474737782e-12 2.20734464590608e-05 1.27289298369955e-05 0.000175803154221525 2.78004206072955e-13 1.06662834012001e-27 1.92384356840738e-14 7.38590338184597e-22 3.97067342490965e-13 2.93233955585908e-18 5.90210992751115e-10 2.63185835390864e-12 6.73866361457359e-13 0.000184599792545689 1.58538293371617e-32 5.95248150869392e-17 5.98296273932982e-26 4.95259912111746e-12 0.000276594190140739 5.69240708149452e-05 6.5057863366869e-14 2.2426786954183e-16 XM_005227486.1 ELF4 PREDICTED: Bos taurus E74-like factor 4 (ets domain transcription factor) (ELF4), transcript variant X1, mRNA. 0.0 7083 100.00 0.559498361122987 NM_001127197.1 ELF4 Homo sapiens E74-like factor 4 (ets domain transcription factor) (ELF4), transcript variant 2, mRNA. 0.0 3135 83.27 0.423542824568904 TCONS_00246312_8 sp|Q99607|ELF4_HUMAN ELF4_HUMAN ETS-related transcription factor Elf-4; 0.0 1142 87.93 0.998489425981873 2 coding 0 1 1 1 -0.0323063645784889 0.774663383103331 -0.00960647401133789 0.876980503355748 CCAGCCCACTTCACCACAGCCAGCCTCTGCCAGCCGGCAGCAGCTAGTATTAGCTCGAGCTTGCCATTCTCATGAAGGCAGGCCTGGAGGAGGAGGAACCAACGACTGTGCTTGTGGCTCTGCTGGCCCGACCAGGACCAAAGCCCTTTGACACACAGAGGCTCTCACGCACTTGTCCCCACACCCGGCACATACATATATATCTGCAGTGTGCTCGCACACCCACAGGGAACTCCCTCCCCAACTCCCGCTCCTGGTTGTAAATTACCGTGCAAAAATACACAGACATAGCACACACACAGGGCACAAGTTTCTCTCTTTCCTGTAAGCTAGACCACTGGACACCCACCCCACACCCAGCATACACATGCGTATACTCACAGGCCAGAGAACACACCCCACCTCACTGGTACCAATTGACCAGTGTCATTCATTCATGTGATCGTTCCACCAACACACATTGGGCATCTACCACATGCTAAGCTTCATCAGTGAGCAGCACCAGCGTCCCTGCCCTCAGCGAAGCCGCTTTCTAATGGGGGAGGTCGCTCCTGTGCTTGGCCCAGCCCAGCATGCAGCCTTGAACCTGGGTTAGGCCACCGCCTACTCCAGTTCTCTACGGCCCCTATTGTACTGTGACTCAAGGAGTAGGTGCTAGGCTCAAGGTATCTGAATAGCATCTTTTCATCAAGGAAACACCGCGGCTCCAGTGGGCCCTGCAGGCCCCACAGTCAGCTCTCTGAGGAGACAGCATGGCTGTTGCCCTGCAGCCCAGTGACCTGATCTTTGAGTTTGCAAGCAACGGAATGGATGACATCCACCAGCTAGAAGATCCCTCCGTGTTTCCAGCTGTGATTGTGGAGCAAGTTCCCTACCCCGAATTACTGCATCTGTACTCAGGCCTGGAGCTGGATGACGTTCACAATGGCATCATAACAGATGGGACATTATGCATGACACAGGATCAGATCTTGGAGGGCAGTTTTTTGCTGGCAGATGACAATGAAACCACCTCACAAACCGTGTCAACCCCTGAAGTCTTGCTCAACGTCGAGTCTCCTAACAACATCCTGGATGACAAGCAGATCTTCAGCACCTCCGAAATGCTTCCAGAGCCAGACCCTGCTCCAGCCATGACACTGCCCAACTACCTGTTTCCTGTCTCTGAGCCCGACGCCCTGAACAGGGCTGGTAACACTGGTGACCAGGAGGAGAACTGTCTGGAGGAGAAGGTCCCCAGAGAAGAGAGCGCTAAGAAGACTGGAAAATCCAAGAAGAGAATCCGGAAGACCAAGGGCAACCGCAGTACCTCACCTGTCACTGACCTCAGCATCCCTATTCGGAAGAAATCGAAGGATGGCAAAGGCAGCACCATCTACCTGTGGGAATTCCTCCTCGCACTTCTGCAAGACCGGAACACCTGCCCCAAGTACATCAAGTGGACCCAGCGAGAGAAAGGCATCTTCAAGCTGGTGGATTCTAAGGCAGTGTCCAAGCTGTGGGGGAAGCAGAAGAACAAGCCTGACATGAACTATGAGACGATGGGCCGGGCACTCAGATATTACTACCAACGAGGCATCCTGGCCAAAGTGGAAGGGCAGAGGCTGGTGTACCAGTTTAAGGAGATGCCCAAGGACCTGGTGGTGATCGAAGACGAGGATGAGAGAAGCGAGGTCACAGCCACATCCCCTCAGGCCTCTGCTCCCTCCACCTCCTCTGGTGGCAGCTCCCGGAGAGCCAGTTCCCGGGTCTCGTCTAGAGCTGCCCCGCAGGGCAAGGGTGACACTTCCTGGGAAAAGCCGAAGGTGCAGCACGTTGGTCTCCAGCCATCTGCGAGTCTGGAATTGGGACTGTCTATAGACGAAGAGATCCCCACTACCTCCGCCATGCTTGTCTCTCCACCAGAGAGCCAGGCCAAAGTCACCAAAGCTGTGAGTACTTCTGCCGTGCCCAGCAGCATCCACCTAGGAGTGGCCCCCGTCAGGTCGGGCTCGGCCCTGACCCTGCAGACCATCCCGCTGACCACAGTGCTGACCAATGGGCCTCCTGCCAGTACTACTGCTTCAACCCAGCTTGTTCTCCAGAGTGTTCCACCTGCTTCCACCTTCAAGGACACCTTCACTCTGCAGACCTCCTTCCCCCTGAACACCAGTTTCCAAGAGAACCAGGTGGCAGCACCAGGGGCTCCGCTGATTCTCAGCGGCCTCCCCCAGCTTCTGGCTGGGGCCAACCGTCCGACCAATCCGGCACCACCCTCAGTCATGGGAGCTGGCCCAGCGGGGCCCAGCTCTCAGGCCCCTGGGACTGTCATTGCGGCCTTCATCAGAACTTCCGGTGCCACCACAGCCCCTGGGGTCAAGGAGGGGCCACTGAGGCCCTCGTCCTATGTGCAGGGCATGATGACTGGGGCCCCCATGGAGGGCCTGCTGGTTTCTGAAGAGACCCTCAGGGAACTCCTGAGGGAGCAGGCTCACCTTCAGCCACTTCCAAGCCAGGTAGTTTCAAGGGCTTCCCACAATCCGAGCCTTCTGGGAAACCAGACTTTGTCTCCTCCCAGCCGCCCCACTGTTGGGCTGACCCCAGTGGCTGAACTTGAGCTCTCCTCGAGCTCAGGGTCCCTGTTTACGGCTGAGCCTAATGTAAGCACACCTGGGAGCCTGCTGACTAGATCCCCAACCCCAGCCTCCATCTCCCCATTCAACCCCACTTCCCTCATTAAGATGGAGCCTCATGACATGTAAATGAAGGGGGTCAGGGGGAAATGTGACTGCCAGGCAAAGTTGAGCAGCATTTGTACACGGACTTCCTCTAAGAGAGACTGACTGAAGTAGTACACCAGCCCTTACATTTCAGCAGGGTGTCAATACACCAGACCCCCATGCCACCCCTGCTTGGTGTCACCATGGCCAAGACAGGCCCAGTTGGAGCATCCCTGGTGTCAGACCATGGCTTTTAAGAGTACTAGGGGATATGCTCTTGTCGGGGTAATGGGCTGACTTCCTGATGGAGGCAAACCTGAGATGTTTGTAACCAGGGCTGGGGTAGGGGCTTCATGAGAAGAGTCTTTTTACCTGGCTGTATTCCACCATCTTCGTTCCCTCCGCAGAGTATTTACTATGCCATATGTGAATATCTCTGTATGTATTTGTGTGTACTTGTGCGTCTTCTTTGGTGAGGATGGGGGTGTAGCTATGAGGTCTTCAAGGGTGTGTGTCTCTCTGGAGGTCAGCCACAGAGATGGGGAGTTTTTTGTTTGGAGGGAAAGCATTCTCCAGTTCCCTTTGTACAAGCCAAGATTTGTTCTGAGACTATGGGGTACAGGTTTGAGCCCCCAAATCTGGAGAGATGTCACAGAGCTGGGGTAGGTCTGGGGAGGAGAGCTTTGATGGGTGTGTTTGTTGGGGAAGACGGAATTGTAGGGGACAAGGAGAAAGCCATGTGGGATAAAACCCTGAAGAGAGGGAAGGAATTCAGCCCTGTGGAGCAGCCCCACAGGCTAGACCGAGGTCTTCTTGGGCTCAGCCTCATTGCCCACCAGTCATTTGCTAGCAGGCCAAATCCTTAATCTCCCCAGAGTGTTTTGTGCCCCTCCAGGGTTAGACTCAGCCACAAGGTCCCCAGGGGAAGGGGGCTAAATAATGGATGTTTGCACCCAGGGCTTGGGCTGTAATTCTAGCCTTCATGGCCACCCTGCTCTGCATCCCAAATCCTGGCTTCCGTCTTGGTTAATTTCGCCCCTGCCATCCATTGCTGGCAGGCGGTGCAGGGGACGTCGGGTAACCACATGCTCGGGGTCTGCCTCCGTCCCTGCTCGTGCCTCCTTGCTGGTCAGCCTGCTTTCTATTCCCCTCACAGATCTGCCCATGTACCCACTCCCTCTATGGCTGCAGTAGACCTCCTCCAGTGGGCCGAGGTCCTTGACGGCCAGCCTTCTCACTTCACCCTGACTCCTCCTCCACGAAGATGGGGCCTGAACCTGTGAGCTCCTGTCCTTTCTGTCCTTCCGCATGCCTTCCTTCCACCTTTCCTCTTTCTGAGAAGGGGGTCAGCCAGTTATCTCTTAAAGTCCACCCCTCGGCAGGGGGCCTTGATCCCCTCCTCTCTCTTCTGTGAATTTGCCTTTGTCTCTCCTGCCAGGTTTGGGAGCAAGGCTGAGAGCTCTACTATGTCAGCCTCAGAAACAGCGATAGGATCTGGTAAATGTGGTTACTGTGAATTGGTGCCTCAGGACCCTTGCTGTGTCCTTGACACAAAACCAGCCACTTGATCTCACTACCTCCCCTGGTTGCCCTTCTCTCTCTCTCCTTCTGGTCACTGCCAAGCCCATTATCATGCTCTCTCACCTCTTGTTCTCCCCCTTCTCCACCCTGGGAGGGAACCATGTATGGTTGTGCGGGTATATTTCTTACATGTCTCCAGCACTTGGCATTAATGTCCCTTTTTCTAATAAAATCAGCTTATGATGACAGCTTCCTGGTGGTGGAGAGCAAAACATCTTGAGAAAGGGTCACCTTTGAAAACAACTTTACACAAAGGTGCCACATGGGTTAGGAGTGGCCCTGCCTCCTCACCTGAACCCCATAGAACTCTTCATCTGAAGTCACTGATACCCTGGAGATGATGTCAAATTTCTTCTTCATAGTTCTTGGCCCCTTGTAAGTCCTCACAGCACATGACACTACTTCCCCTTCCTCTGTCACCCTCTCTGTGCCCTTTCTAGATCCACATCTACATTCACTGTGGGCACCCCACGAGCCTCAGCCATCCTCCTGGCTCCAGTGAGGCTCTTCAGGTTGGGTATGGAATCTAGAGGCCCAGCCCCTACTCTTCTCAGCTTCTGGCTCACATTTCTCCTGGATAGTTCTACCTAGATGATTGTCAGACCCTCAAAGATTGTCCCTCTATCAAAAATGGATTTTTGGAAGTCTTCCAACACACAAAACCATTCCAGACAAAAAGGCTGTCATGACTTGCCTATTTCTGTTATTGTCCTGACCTTCTAAGCTTGACATTTCAGAGCCATCTGCTGGCCACTTCACTTGACCCTGACCCTTACTCGTTGCCTCAAGTCCGGTGTGGTTTGCCATGTCTCTCCAATCCAGCCATTCTTCCACACTTGAAGAGAGCCTCCAGCCTTGTTCAGCCTCCCCCAGAGCTTATCCCCTTCCCTGGACATATCAGCAGTCCCCCAGTGTGATCTGAGTCACCCCCTCCAACCTGCCAGGGCACCAGCTCTATTCTTCCTCTGCCAAAAAGTCTCCTGGGGCTTCTCACTGCCTACAAATGGGGGTAATACTCAAAATCCTTAACTTCCAATCTGTTCTTAGTGGCTGGGCATTAACCCTTTATTGTCTGACTCACAAGGCAATCCAGGGGTCCTGGAGGAGGGATTTGGGAGCACTTGATGGCTCAGGGCAGTTGTTCCAGGAGTATTTTGCACTTTACCATCACGTCCTAGCCTACTTCCCCATTCACCTCCCACTGCTCCCCTGACCCCTTGTATTGCTCCAGTCAAACGGATGGATTCACTAACCTTTGCACCTGCTTCTGTTGGAGTTGCCTCCCTCTGTACTTTTACTTTTCTTGCTTCTGCTCAACCACAATGCTCTTCCCACCCCGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCATGTCCAGTTAAGCTTATGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTCCCACCCCGCTAGTACTCATCAAATTATACCCATCCTTCAAGGCTCAGTTCATAGACACTGCCTCCCCAGACCAGCCTACCCTTAAGTGAGTTCATTCGAAATATGTTGCAAGTGCCATTCTTTGGTAACTGACTGTGAGCAGCCTGTGACATCGCCTCTATAATAATGACAAACTGTTACTTAAATCTTCAATGGCCTGGACTTATGTAGTCTCCCCAGTTAGTGTGTTACCTTCTGAGGGGAGTGGGACTGTCGCCCGTAGCAGGGCACACTACGAAGCATCTAGTGAGCGTCAACGGACGGTTACTGATTGAGCTGGGGAGAGAGGGGGACCAAAGTGAGGTAGGTGACCTCCGACCTCCCCTCTGCACAGACACTCACCCCGGGTGCTCCACTGCCCAGGGCCGGCCCTCCCTGGCTCAGTGCCCTCATGGTACCCCCACCCCACCCCTGGCCTTAGCACCCAAGAGTTGTTACTACTTTGAACATCCCCTGCCTCTCAAGAAACTTCCCTGTCCAGTTTCTTTCCTATTCAAAGTGTTAAATTAGCTAAGCTGATAAACTAACCTGTGCTGATGTAGTTATGGGAGAGGGCTAGAGGAGAGCCTCAGGAGAAAGGTTCATTTCAACCAGGGTCGTGGAGCAACAGCACCCCTGCCTTTGCAATAGTCTGATGGAGTCAAGAGACTGGCTCCTCACCCCCAACAGCTGATGCATTACTCCCTCCTCTGAGCTCCCACAGCACTTTGTATATACCTCTTATTGTAGCACTTAGCACATGGTAGCGCCTTAGCTATGTGTTTATGTATGTTTCCCCTCCAATAGACTGTGAGCTCCTCAAGGACAGGGACTGTGTGTTAGTCACTGATGTATCCCCAGCGCCTAGCACAGTGCCTGGCACACAGTAGGTGCTCAATAAATGTTTATTAAAAGAATGAATGGGTCCTGTTTCTAATCATGAGATTCCAGTGCTATACTAAGGCAGGCCAGAGAGGCCGGGAAAGGACACCCACACGGGGCCTCCCACGGCTTTCGACCCCTCATAGAGCATGGCAGGCAGCTGCCTCCCTTGCCCATGTCTGCGGCCACCCCAGGACAACAGGAGCCCAAGGCTGCTTCCAGCAGTGCCTTGCTGTCACTAGGTGCCCGGGGCGGCTCTGAACTGCCCTTCGCTGCTGCCTTCTTCCTGGGACAGACTCATCGCTATTTCCTCATACCTGGGTGGAAATGTCACTTGAGTGGTGGAAATGTCAGCCC EMBV3_40015 TGGATTCCTCACTGGCCCCTGCTCCCATCCAGCATGACTCTGACTCTTCAACTTGCTGCA Gene GeneID:506656|C1orf35:NM_001034272:14_cdna Constitutive 2 NULL GeneID:506656 7 GENE C1orf35 MMTAG2 chromosome 1 open reading frame 35 EMBV3_33184 ATATTCTTTACCGACTGAGCCACAGGGGAAGCCCTTGAGAGTCCGCATGCACGGTGATTA Gene BVT0101_026526 + 0 NULL GK000009.2:15901119-15949564 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234814 TCONS_00234818 TCONS_00234812 1 XLOC_144100 NonCoding TCONS_00234818 XLOC_144100 NonCoding NonCoding IMPG1 9:15879269-15907844 x TSS176203 1242 3 TCONS_00234818_2 76 0.165056360708535 4 0.956673899349059 1.54774032666181e-05 9.95725436191765e-08 0.000471696072441572 0.000245249561630341 0.00031732938739009 1.25890547737278e-05 1.12433884272713e-21 0.000187254379336214 0.000296009192539625 8.36817472091861e-15 0 1.43513775477779e-05 3.69119762793893e-05 0.000119348450914144 0.000248862605901346 0 0 0 0.00141888806973741 0.000793215102059169 0.000160594088650595 0 0 0 0.000613957833746045 0.000700348549515791 0.000297141204597174 0 0 0 NM_001105444.1 DUPD1 Bos taurus dual specificity phosphatase and pro isomerase domain containing 1 (DUPD1), mRNA. 3e-27 127 78.81 0.118357487922705 0 noncoding 1 1 0 0 -0.381673880135212 0.196946062388487 0.0202146400528806 0.670483560693248 CTGACCTCAGGGGGAAGCTTATGCTCTGGTGCTGGTGAGGGCGTCTGAGAAGCAGAGAGGAGTGGAGACCACGAAAGCCACAGATGTGATGATGAGAGAAGGAGTGGAAGACAGGCCAAAGAGAGGGTGTTGGCAGAGGATTAAACTCCTGGAGCCATTCATCTGGCCGCCACCGTGGTGTCTGGGGTCAGCAGCTTCTGAAGATCTCCAGGTGATTCCAAGATGTGGACAGGTTTGGGAACCACTGTTTTGTGGATGTGTAAAGAGACCTTCAGCCGAAGAGTCAGGAGAACCCTCTTCACATTGGCTTAAACAGTAAGGGAGTTATTACTGCATATGAAAGAAAGCTAAAAGGCATATTCTTTACCGACTGAGCCACAGGGGAAGCCCTTGAGAGTCCGCATGCACGGTGATTATCAGTGATGCAGCTGGTGGGTGCCACACCATTGTCCTCTCAGAAGCTTTGGAAGCTGGATGCCATCACAGCCTTCCTTGCCTCCAGCACTAGCCTTGTTCAGCTCCACTTTTCCCTGCTGAGGGTGAAAGCCAATGCTTGCTTCTCTCAAAGAATCAGAGCAGATGCATTATTTTTCTTCACAATGCAAAAACCAGGTTTGGCCACTGCTTTTGCTACATCAGGAGGAACGGATTAGGACCTGGGAAAACCATTACAAGAAACAACAGTTGCTATCTTCTATTCTCTTGTATATTCATATGGATACATCTGTACTGAGCTCCTCTTCCATCTCACTGAACTGAGGAGAAAAAAAAAAAGAGAAAGGACAGGATCTATAAGTGAGATGCTGGGAAATTTTGCTGAGGACATATACAGCTTGGTAACAGGGCAGAAACAGAACTGAAATTGAAGGGAGAAGTAGAAAAGAGAGGGGTGAACAACAGAATCCCTGCTGGATAGTTCAGGGAACTATATTCAATAATCTGTTATAAATCATAATGAAAAAGAATTTGTAAAAGTATGTATATATGTATAACTGAATCACTTTACTGTACAGCAGAAAATAACACAATATTTCAAATCAACTCTACTTCAGTAAAAAAATAAGCTAAATAAATAAAATAAAAATGCCTACCAAGTTAAAAAAAGGAGAGTTCATTTGACTTCTGGGCAAACATTAAAAATGATGGTTTGAAAATATATTTTGCTGATCCGATTTTTACAAAATAATTATGTATTCATATACTTGGAAGAATCGGAAAAGATCTGTAAAAATGTTAATTACG TCONS_00236684 r 3' 1131 TCONS_00236684 r 3' 1217 EMBV3_27746 TCAGTCTCTGTTTCTTGGAAGGAAAGTCCTGCTAGTTGACTGACAATTCTAAGCAGGGAG Gene GeneID:522791|RNF11:NM_001077953:64_cdna Constitutive 0 NULL GeneID:522791 3 GENE RNF11 Sid1669 RING finger protein 11 EMBV3_08715 CATTGCACTGCTGAGTATAGCTTGTGGAGACTTGACCTTCAACAACCATTTGGGGCTGGC Gene GeneID:618173|LOC618173:XM_002693445:100_cdna Constitutive 0 NULL GeneID:618173 15 GENE LOC618173 NULL similar to olfactory receptor Olfr543 EMBV3_13249 TCCCGGCATCTTTCGTGGTTCAGCAACAACCTTTCAGAAGTGTATGGCAGGATTAGGGAG Gene BVT0102_164980 + 0 NULL GK000008.2:96153862-96201778 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29342 TCATCCACTCCGTCATGGGATCACTTGGGACCAGCGCCACAAACGAGAGTCTAAAATTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23377 TCAGGCTGGTGGAAAGGCGATAAGAAATGTAGAATGGGAACCGCTATGAAGGCAATTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31524 TCGCTTTCAAAGAATTGAAGCAACGTGTGATTAGGACCATGTAGAAAAAAAGAGCTTAGG Gene GeneID:514085|E2F6:NM_001076848:123_cdna Constitutive 2 NULL GeneID:514085 11 GENE E2F6 NULL E2F transcription factor 6 EMBV3_02909 TATACGCTCGCCTCCCTCTACCACCGCGAGAAGCAGGTTTTCCTGCCCAAGTACAGAGGA Gene GeneID:524303|SLC45A3:XM_002693888:197_cdna Constitutive 0 NULL GeneID:524303 16 GENE SLC45A3 NULL solute carrier family 45, member 3 EMBV3_24754 AGACCCTGTGCATCAGCAACTGCCTGATTTCGGAGTCAGACCTGACGTACCTGTCGCAGT Gene GeneID:785023|PRAME:XM_002694551:538_cdna Constitutive 0 NULL GeneID:785023 17 GENE PRAME NULL preferentially expressed antigen in melanoma EMBV3_41574 GGAAGGAGGGATAAGACCCACCAAATGCTTGGAACTTAGTTGCACTGCTATAAACGACAG Gene GeneID:281038|CASR:NM_174002:8_cdna Constitutive 2 NULL GeneID:281038 1 GENE CASR NULL calcium-sensing receptor EMBV3_18612 CATCAGAGTGGAAGGAGGCACCTGGGCTGTGTATGAAAGGCCCAATTTTGCTGGGTACAT Gene GeneID:281724|CRYGS:NM_174292:30_cdna Constitutive 0 NULL GeneID:281724 1 GENE CRYGS NULL crystallin, gamma S EMBV3_03264 CTGTTCCATGCTACTCTCTTAGCTTCTGGGAGTTTGCTGGATGTAGTTGGCATTACTTGG Gene BVT0102_202986 + 0 NULL GK000012.2:57877507-58979621 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040303 1 XLOC_024119 NonCoding TCONS_00040303 XLOC_024119 NonCoding NonCoding - 12:58880241-58882882 - TSS29804 2641 6 TCONS_00040303_1 49 0.411207875804619 1 0 0.00167431012910038 0.00231723750394001 0.00070928879083847 0.000517869189972888 0.00136562228950753 0.000304070126598167 0.000721695145903117 0.000547575814945699 0.00167263385030215 4.67379231897301e-06 1.86359109066789e-05 0 0.000192842644333983 0.000297909301979588 0.000190414515345015 1.66676455685023e-06 0 0 0.00165900815736059 0.00250016253137481 0.000587221402998523 0 0 0 0.000996903659705021 0.000752744451123997 0.000599004032995618 3.63694543514961e-06 0 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 6e-123 446 95.67 0.104505868989019 0 noncoding 0 0 0 0 0.147771606961966 0.375219696100587 0.0174248628261587 0.83073014365479 CTCCAGGGGATCTTCCTGACCCAGGGATCGAACCTGCATCTCCTGTGGCTCCTACGTTGCAAGTAGAATCTTTACCACTGAGCCACCTGGGAAACTCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTTGTGTCTGACTCTGTGCAACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTGTGCGACCCCATGGACTGTAGCCCACCAGGCCCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCAGTGTATGGTAAATCACAAGCACAATTTAGTTGTAAGCTATAACTCTAGAAAGAATGATCTGCATAATATCTTAAGGGTATGTTATATATGCCGTACTGAGTTATATTCATTAAATCCAAGGTAGATTTTCATTAATTATAATTAAAACATGTATCCATGTGAACCTACATGATATAGAATATACCAGGTGTTCTAGGACAAAGAGGGGAGCTGATTAAATGTGTATGATCTACAGTCCAACATTTACAAATTATATTTTTTTATGTTAGAATATTATATCTTTCATACTTGTGTATACATCCTCTTAATTCAGGAAAAGTGGTTCAGTTTTAAATACAGCAATCCCAGCAAAACAGACTCCTCTTGTGTAGCATGAGATGGTGGTGGTCTTTCTTTCTCCGCCAGGAGTGCTACTCCCCTGTCTTTGGATCACCCCTTACCTTCCTTTACACCTCAGTTTAAAAATCTCTTCAAAAGGATCTTCCTTGTGACCTCAACTAAAACAGCTATAACGCTTTGATTTTCTTTAAGGTGTGTGTAGCTACATGAAGTCACCATGTGCATTTGACTCCTAACTTGTTTTCTGCCTTTTCCACTAAGTAGACAATGCTTTGTTTTGTATCTTTGTATTCCATAGTGTCAGGTTAATGCCCGATACATATTCAACAAATATGTATTGAATGAATGAATGATGTCAGCTAGTCATGATTATTCTTATATTGCAATGTTTGGTTTTGGCTGTTTGCTTCTCTTAGATTTCACCCTGGAAAACCTTCACCTATATTCAGCATTTTAATATAAGCCTGAGCTATTCCTCTCTCCCCTCTTTCTTTCCCCCAGCACTGTTTCAGTGCTGCTGACCTATGTTAATTGACTTCCCAACTTTCAAGTAACCTAGAACTCAAAATGATTTATATATAGTAGAGAATAGGGTCAGGTATTTTTATCTGGAAGAATGAAAACTACATACAAAAATAACACACTTATTTGATAGAGAATATATATAATAGACTTGCTATAGCACTGTCTGAATTCTGTTGACAACTTTTATTATTTTCACAAAAGCTCGGCTGATGCTGCCACTTTCCATTGAACTGTTGGCTATCATAACTCAGTGTTTAATTACATACCTTTTAGTAAATGATGGTTAAATAATGCATATATAATTGGACATGAGTTCTGTGGCCCCCAAAAGTAGTGTGTTCTGTCTGTTGTCATGGTGTTCTAAGTCTTTCACCAGGGAAGAATATTAGCCTTCAACGTACATCTATGGCTTTCTTTCTCTTACCTATTTCTGCTCAAGATGAAATGTGTACATCTAATTATTATCACTAAGTGCATGGTAGTCCCCAGCTGGCCACAATTATCTTCATGTATATTTGTAAACATGCCACCTTGTCATACATTCATGCTAATGTAAGGGAGTAGTGATGTAGATATACTATATTTGTTTGCTGAAGTGAAAGTGTTAGTTGCTCAGCCATGTCTGACTCTTTGTGGCCCCATGCACTGTAGCCCTCCAGGCTCCTCTGTCCATGGAATTCTCCAGGCCAGAATACTGGAGTAGTTAGAACAAGATCCCCTGGTTCCCAACCTAGGAATCAAACCCAGGTCTCCTGCATTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGAAAGCCTATATTATTGTTTACTAAGGCTGCTTTAAAAGCTACTGTAAATTCGGTAGTCTAAAAAGCATGCATTTCAATTCCAGAGGCTATGAGTCCATGATAAGGTGTTGTCATGGTTGATTCCTTCTGAGGGAAGTAAAGGAAAATCTGTTCCATGCTACTCTCTTAGCTTCTGGGAGTTTGCTGGATGTAGTTGGCATTACTTGGCTTGTGCATACGTCAGCTCAATCCCTGCCTTAATGTTCATGTGGTGTTCTCCTTCTGTATATATCTGTTTCTTCACATTTCCTGTTTTTGTAAGGATATCAGTCATCCCAGACTAAGGCTTCTCCAATATGACCTCAGCTTAGATCTGCAACATTCCTGTTTTCAAATAAGTTCACCTTCTGAGGTACTGAAGATTAGAACTGTATCATAAGAAATTTTAGGGGACACAATTTGATGCATAACAGCTATATGATTCCTTCTTGATATTTAAACATAAGGCATGCAGATTTTCTGTATTTTGTAACTAAATGTTCACTGAATAGTGAAGAAAGTTAATCATTAATCTTAGGATTTGGCTTATTCGTTGCAAATAAATAAAAACCTGAAATTATTCAACATTGTTT TCONS_00037104 TCONS_00037105 TCONS_00037103 . 3' 260357 TCONS_00037104 TCONS_00037105 TCONS_00037103 . 3' 262997 EMBV3_31640 GACCTGCTTCAGGCCAATGTACAACAGGATGGTAAAGACTACATTCCGCTCAACGCCATC Gene GeneID:503620|FLT1:XM_002691763:326_cdna Constitutive 0 NULL GeneID:503620 12 GENE FLT1 VEGFR1 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) EMBV3_38489 GCGGCCGACTTGGACCTTCAAACCCCAAAAGGTCGTTCTGGGGTTGGAGTTTTCCCCTCC Variant GeneID:100316905|LOC100316905:XM_002689764:24_cdna 223^384 9 EMBV3_02070 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_39716 ATCAACCCCATCACGCTCAAGAGGTGGCTGGAGAAGTTTTCGCAAATGGACATCCTGGTC Variant GeneID:511665|PDE9A:XM_002685134:98_cdna 787^891 2 EMBV3_08070 GeneID:511665 1 GENE PDE9A NULL phosphodiesterase 9A EMBV3_10353 CCTCTCCTGTGAGTCCAGAGGGGAGTAGAGGCAAACACCGAGCCACCTAAGCTGAGTAGA Variant GeneID:616849|WIPF2:XM_002695964:288_cdna 447^578 2 EMBV3_24888 GeneID:616849 19 GENE WIPF2 NULL WAS/WASL interacting protein family, member 2 EMBV3_18700 AATCATGGGAGTAGACCTGGTCTTCACAAGGATGTATCTTGCCTGAGGACAGTGTTATCC Gene BVV0101_014277 + 1 EMBV3_11971 GK000023.2:40677007-40770311 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118457 TCONS_00018603 TCONS_00253739 TCONS_00238581 TCONS_00118490 TCONS_00012285 TCONS_00059696 TCONS_00250599 TCONS_00127445 TCONS_00219592 TCONS_00125637 TCONS_00118456 TCONS_00031886 TCONS_00234240 TCONS_00246739 TCONS_00087729 TCONS_00174808 TCONS_00196823 TCONS_00118491 TCONS_00174807 TCONS_00232829 TCONS_00251720 TCONS_00173459 TCONS_00198768 TCONS_00072261 TCONS_00055707 TCONS_00174805 TCONS_00023655 TCONS_00204211 TCONS_00171428 TCONS_00207933 TCONS_00018600 TCONS_00174806 TCONS_00160961 TCONS_00232824 TCONS_00118487 TCONS_00089291 TCONS_00199364 TCONS_00099018 TCONS_00209974 TCONS_00000529 TCONS_00246741 TCONS_00246740 TCONS_00220566 TCONS_00118459 TCONS_00232830 TCONS_00118040 TCONS_00056144 TCONS_00204210 TCONS_00118441 TCONS_00074644 TCONS_00010963 TCONS_00220168 TCONS_00174809 TCONS_00162767 TCONS_00125353 TCONS_00018601 TCONS_00252008 TCONS_00080713 TCONS_00107436 TCONS_00118488 TCONS_00092544 TCONS_00137813 TCONS_00201129 TCONS_00018602 TCONS_00092546 TCONS_00004603 TCONS_00037923 TCONS_00108562 TCONS_00056149 TCONS_00221350 TCONS_00125692 TCONS_00137814 TCONS_00118489 TCONS_00176866 TCONS_00027918 TCONS_00168038 TCONS_00173458 TCONS_00092545 TCONS_00218901 TCONS_00006385 TCONS_00206552 61 XLOC_072622 XLOC_009288 XLOC_156678 XLOC_145248 XLOC_072644 XLOC_007831 XLOC_036486 XLOC_153542 XLOC_077655 XLOC_132911 XLOC_077179 XLOC_018131 XLOC_143719 XLOC_151107 XLOC_052579 XLOC_104695 XLOC_118488 XLOC_142312 XLOC_154661 XLOC_104361 XLOC_120422 XLOC_044030 XLOC_033515 XLOC_014322 XLOC_124371 XLOC_103815 XLOC_126448 XLOC_097854 XLOC_142307 XLOC_054076 XLOC_121017 XLOC_059261 XLOC_128485 XLOC_000141 XLOC_133883 XLOC_072206 XLOC_033947 XLOC_072607 XLOC_046398 XLOC_006514 XLOC_133485 XLOC_099648 XLOC_076895 XLOC_154949 XLOC_049597 XLOC_063346 XLOC_056919 XLOC_084023 XLOC_122777 XLOC_001070 XLOC_021752 XLOC_064467 XLOC_033952 XLOC_134666 XLOC_077234 XLOC_106640 XLOC_015372 XLOC_102874 XLOC_132220 XLOC_001948 XLOC_125074 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_05147 CTGGGTGAGAAGATGACAGAGGAAGAAGTAGAGATTGTGTATGTAGCCCGGACGCTTCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00805 CTTTAACGCAGTTCCCGCCATCGCAGTCAGAGGAAAAGAGCAGTGGGTTCCGGTTGAAGC Variant GeneID:508641|RANBP3:NM_001075369:39_cdna 206^277 1 EMBV3_21701 GeneID:508641 7 GENE RANBP3 NULL RAN binding protein 3 EMBV3_28892 TACATACTGAAAGCCCGCAGAAAGCAGGCAGCCATGAGACCAGAGGGTGTGGATGATGAA Gene GeneID:100300478|LOC100300478:XM_002695237:29_cdna UTR3_Alt 2 NULL GeneID:100300478 18 GENE LOC100300478 NULL similar to sialic acid binding Ig-like lectin 5 EMBV3_09317 GTAGGCTGGGACTTTGTCTTTCAATGTTCCCTATGTGAGGGAGTGTTTATCAGTGGGTGC Gene GeneID:507824|LRRC8E:XM_002688862:219_cdna Constitutive 0 NULL GeneID:507824 7 GENE LRRC8E NULL leucine rich repeat containing 8 family, member E EMBV3_36266 CTTGGCCCCATTATCCCCCTCCCACACCCCTTTCCATCCCTACTTTAAAGATTCAGTTTC Gene GeneID:327709|GSTM1:NM_175825:41_cdna Constitutive 1 NULL GeneID:327709 3 GENE GSTM1 NULL glutathione S-transferase M1 EMBV3_02651 GTTGAAAAATCCCATAGATTGTAATCCTGCAACCTCGCTGGACTCTCAGCCTCTGAGCAG Gene BVT0101_036730 - 1 EMBV3_26745 GK000028.2:45418795-45900066 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162807 1 XLOC_099688 NonCoding TCONS_00162807 XLOC_099688 NonCoding NonCoding - 28:45424918-45425921 - TSS122139 1003 2 TCONS_00162807_1 54 1 0 0 0 0 0 0 0 0 0 0 0.000135371903797851 1.1411674089083e-05 0.000340456397488351 0 3.75194026825613e-05 0 7.89976755352312e-05 1.6552618299302e-05 0 0 0 0 0 0 0 0 0 0 9.57644404136662e-06 7.26013828245433e-05 0.000191816399053365 XM_005226615.1 CXCL12 PREDICTED: Bos taurus chemokine (C-X-C motif) ligand 12 (CXCL12), 0.0 1810 100.00 0.999002991026919 NM_000609.6 CXCL12 Homo sapiens chemokine (C-X-C motif) ligand 12 (CXCL12), transcript 7e-142 508 72.08 0.986041874376869 0 noncoding 0 0 0 0 -0.0648929873653997 0.574949818334481 -0.0156257417107637 0.744373263989661 CTTGCAGTTGCTCCTAAGTGGAGACTGCCCAGCTAAAGCAAATATGCATTTAAATAGTCCATTTGCACAGGAAAAGGCTCTCTTGATCCCCTTTTGCTTTCAAAACACAAATCCTGTGCATCACTTTGATTAGGGAGTACCCAGCTGTCCCTCCTGATCCAGTGCTGCCCCTCCCTGACCTTCCCTTGTGCTCTGCGCAGCCTCCAGGGTGGTCCTCCACCACCAGCCTTTGCATCAGGACCCAGGCAGGGAAGACGGGGGCGGCTGAGCTCGCAGATGTGCTGCGTGTTGGAATCTGAATCTGTGCCTTGTGTTGTTTGCGCTGTTTTGCCCCACTCCGGCCAGGTGCTAAGACCCCAGCGAGGCTCAGGAGGGGCCCTCTGCTTATCTGCCAGTCCTCCAGAAATAGGAGGGCCAGCTTTGAGGAGAGGGCCTGAGTGACAGAAGGTTGTAGCTGCCCGTGTGAAGTCCAGAGAGCGTAAGCCCTGTCACTGGACCCAGTCTGACCTCCTTTTCTGACGGCTGCCTGGTGTAATCACTAGGAGATCTCTCACTGGGAGTTACCACCTTCCCCCGGTGGTACCCCCTTTTGTAGCTGGATGAGAACTGTGGGGTCCTGATCCCTCTGCATCTTCGCTGGGAAATTTCCCATCCCTTGGAAATATCCCTTAGAAAAACCTTCATGTCCCCTAAGGAGACCACTGACATTGCCAAGTTGAAAAATCCCATAGATTGTAATCCTGCAACCTCGCTGGACTCTCAGCCTCTGAGCAGTGATGGGTTCAGTGTTAAATGTGATAAATACTGTATTTTGTATTGTTTAAATGGCATCTCCCACAAAATGTGAAAATGGTCCCGGAGAAGGCAGCTTCCTGTATGCAGTGTGCTTTTTAAAAAAAAAAAAAAAAAACAAGTAACAACTCCTTTTGAGAAACAATTTCTACTTTGAAATCATATCAATGAAAAGATGTATATGCACTTATAATTTTCCTAATAAAGACAT TCONS_00159846 . 3' 397 TCONS_00159846 . 3' 1399 EMBV3_02708 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15627 GTCTATGCCTTTGTTCACGAGTAACGCAGAACTGACATTGTGACCGTCTACCAGAGTGGC Gene GeneID:613421|ARPC5L:NM_001034737:47_cdna Constitutive 1 NULL GeneID:613421 11 GENE ARPC5L NULL actin related protein 2/3 complex, subunit 5-like EMBV3_17337 TCCACTTTTTCTGGGCCCCCTTTTCCACCTCTTCTATTTTCCCCAGCTCCTCCCACCTTA Gene GeneID:505147|PCGF2:NM_001144106:56_cdna Constitutive 2 NULL GeneID:505147 19 GENE PCGF2 ZNF144 polycomb group ring finger 2 EMBV3_35878 ATTGTTCCAGCCTTGGCTGCCTGCATCCAGCTTGGTCCTGGGCTCTACTCTCCCCCAGCA Variant GeneID:100138035|TMCO6:XM_002689220:62_cdna 681^766 4 EMBV3_10257 GeneID:100138035 7 GENE TMCO6 NULL transmembrane and coiled-coil domains 6 EMBV3_32148 ATAGCACCTAGTTACTTCACCAACCAATCAGAAGAATGTCCTCCAGGCACCCTGTGACCC Gene BVV0101_021886 + 0 NULL GK000004.2:77512437-77540032 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23421 ATGGTGAGCCAAGCTGGAACAGGTTTTTCCTTCAACACTAAGAGAAGCCGACTATGGGAG Gene GeneID:614711|MRPL33:NM_001113308:222_cdna Constitutive 0 NULL GeneID:614711 11 GENE MRPL33 MGC128600 mitochondrial ribosomal protein L33 EMBV3_31582 ACTGGCAAGCTGGAGGGCTTTGAGAGCATCGACGAAGCTATAGCCTGGCTCAGGAAGGAA Gene GeneID:618107|C8H8orf13:NM_001076494:23_cdna UTR3_Alt 3 NULL GeneID:618107 8 GENE C8H8orf13 C8orf13 chromosome 8 open reading frame 13 ortholog EMBV3_38407 AACTGTGAAGTGAGGATCTTTCATGAATCGTTTCTCAAAGTGCGATTATCATGACATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26339 GTGAGGTCAAGGGCCATAGAAAGCACAGTCTCAAGGCCACAAAAGATGGCTGCCTAAGAT Gene GeneID:338059|ATP6V1B1:NM_176654:5_cdna UTR3_Alt 2 NULL GeneID:338059 11 GENE ATP6V1B1 NULL ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 EMBV3_24513 CAAGTTAAGAAAATATTATGATGAGGACATTTAACATGAGATCTACCCTCTCAGCAACTT Gene BVV0102_076566 + 0 NULL GK000008.2:65781302-65834279 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07511 TGCTCCCTAATCTGGGTGTCTGTAGCTAAGGGACAAGAGGTTGTGGAAGTTGTCCGTGGT Gene GeneID:515063|NDRG2:NM_001035304:58_cdna Constitutive 1 NULL GeneID:515063 10 GENE NDRG2 MGC128884 NDRG family member 2 EMBV3_10654 TCAGATTGAATACGGACTGTGTGTTGGTTACATATCGACACTGCCTGTCGTCCTGTCATT Gene GeneID:529700|RPRD1B:NM_001101134:1177_cdna Constitutive 2 NULL GeneID:529700 13 GENE RPRD1B C13H20ORF77 Regulation of nuclear pre-mRNA domain containing 1B EMBV3_28172 AGCTGAATGCTTCCTGTTGGCTGCAATGGCCTATGATCGGTATGTTGCCATTTGCCACCC Gene GeneID:510877|LOC510877:XM_002689103:37_cdna Constitutive 0 NULL GeneID:510877 7 GENE LOC510877 NULL similar to Olfactory receptor 2M3 (Olfactory receptor OR1-54) EMBV3_35381 GGGCAGCGCCGCGCTCGCCCGGGCCGCAGAGAGCTAATCTCAAAGTCATTAGCACAATGT Variant GeneID:504764|GRHPR:XM_002689718:25_cdna 109^239 4 EMBV3_29819 GeneID:504764 8 GENE GRHPR NULL glyoxylate reductase/hydroxypyruvate reductase EMBV3_32142 CTTGGATTCAACTGAGAGATTTGAAAATTAATGGCATAAATGCCTCCAATCAACCCTGGC Gene GeneID:530173|OTUD1:XM_002692092:288_cdna Constitutive 0 NULL GeneID:530173 13 GENE OTUD1 NULL OTU domain containing 1 EMBV3_08535 CTGACAGCATTATGGACGGCTCTTCCACCTTCTCATGATCACTCTGGAACCTGCTCATTT Gene GeneID:508389|RFC5:NM_001075358:93_cdna Constitutive 3 NULL GeneID:508389 17 GENE RFC5 NULL replication factor C (activator 1) 5, 36.5kDa EMBV3_05647 GGAGAGGAAATGATTGAAATAGAGAATTACCACTTGGCACCAACTATAGGAGTGGATGAT Gene BVT0102_343153 - 1 EMBV3_13296 GK000028.2:29546126-29552048 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160539 TCONS_00160540 TCONS_00160543 TCONS_00160545 TCONS_00160537 TCONS_00160541 TCONS_00160542 TCONS_00160546 TCONS_00160538 TCONS_00160544 1 XLOC_097680 Coding TCONS_00160542 XLOC_097680 Coding Coding ANXA7 28:29548403-29573976 j TSS120027 5425 1 TCONS_00160542_2 463 0.393917050691244 13 0.788362271234162 0.00074671048761175 0.000354815645452165 4.06871881283745e-11 7.22337495575884e-33 0.000421991895288068 1.45130826023267e-08 0.000174965050017834 4.98293391194493e-13 2.97516169869332e-07 1.30268586920167e-08 1.55251734202151e-05 5.61599466419451e-05 4.14530259731331e-10 0.00020283160501687 0.000134790090471718 0.00353853519361961 5.60285735372128e-15 1.11980739566291e-17 0.00064148704137893 0.000101618080506791 0.000311414269133264 0.00156294130954417 0.000414853326234508 8.89743677384915e-05 0.000301000960529254 0.000843587439602877 0.000271101938620608 6.40134245632762e-06 9.27402807786162e-05 0.000204093653020707 XM_005226417.1 ANXA7 PREDICTED: Bos taurus annexin A7 (ANXA7), transcript variant X2, 0.0 9459 100.00 0.966635944700461 NM_001156.3 ANXA7 Homo sapiens annexin A7 (ANXA7), transcript variant 1, mRNA. 0.0 2401 86.34 0.372534562211982 TCONS_00160542_2 sp|P20072|ANXA7_BOVIN ANXA7_BOVIN Annexin A7; 0.0 938 100.00 0.997840172786177 1 coding 0 0 1 1 0.0279967701459548 0.825006797477289 0.0133824507731377 0.819812619659936 GGTTGGGCCGTGACGCTGCTCCGCGGGGTCAGAATGTCATACCCAGGCTATCCGCCCACAGGCTACCCACCTTTCCCTGGATATCCCCCTACGGGTCAGGAGTCATCTTTCCCCCCTCCTGGTCAGTATCCTTATCCTAGTGGTTTCCCTCCGATGGGAGGAGGTGCCTACCCACCAGCACCAAGTAGTGGCTACCCAGGAGCTGGAGGCTACCCTGCCCCTGGTGGCTATCCAGCCCCTGGAGGCTATCCTGGTGCCCCACAGCCAGGCGGAGCTCCATCCTATCCTGGAGGCCAAGGGTTTGGAGCCCCACCAGGTGGAGCAGGCTTTCCTGGCTATCCACAGCCACCTACACAGTCTTATGGGGGTGGCCCAGCACAGGTCCCACTGCCTGGTGGTTTTCCTGGGGGAGCGATGCCTTCTCAGTATCCTGGAGGACAATCTCCTTACCCTAGTCAGCCTGCTCCGATGACTCAGGGAACTCATGGAACAATCCGACCCGCTGCCAATTTTGATGCCATGAGAGATGCTGAAGTTCTTCGTAAAGCAATGAAGGGTTTTGGTACAGACGAGCAGGCAATTATAGATGTTGTGGCCAATCGTTCCAATGACCAAAGGCAAAAAATTAAAGCAGCTTTTAAGACCATGTATGGCAAGGATTTAATCAAAGATCTTAAATCAGAGTTAAGTGGAAATATGGAAGAACTGATCCTTGCCCTGTTCATGCCATCTACGTATTATGATGCCTGGAGTTTACGGAATGCGATGAAGGGAGCAGGAACTCAGGAACGTGTGTTGATTGAAATTTTGTGCACAAGAACAAACCAGGAAATCCGAGAAATAGTCAGATGTTATCAATCAGAATTTGGACGAGACCTTGAAAAGGACATTAGGTCAGATACTTCAGGGCACTTTGAACGTTTACTTGTATCCATGTGCCAGGGAAATCGTGATGAGAACCAGAATGTTAACCACCAACTGGCTCAGGAAGATGCTCAGCGTCTCTACCAGGCTGGTGAGGGGAGACTAGGGACAGATGAATCTTGCTTTAACATGATTCTTGCCACAAGAAGCTTTCCTCAACTGAAAGCTACCATGGAGGCCTATTCCAGGATGGCTAATCGAGATTTGTTAAACAGTGTCAGCCGTGAGTTTTCCGGAAATGTTGAAAGCGGTTTAAAGACCATCTTGCAGTGTGCCCTGAACCGCCCTGCCTTCTTTGCTGAGAGGCTCTACTATTCTATGAAAGGCGCCGGCACAGATGACTCCACCCTGGTCAGGATTGTGGTCACTCGAAGTGAGATTGATCTTGTCCAGATAAAACAGATGTTCAGTCAGATGTATCAGAAGACGCTGGGCACAATGATTGCAAGTGACACGAGTGGAGATTACCGAAAGCTTCTTCTGGCCATTGTGGGCCAGTAGGAGAGATTTTTATAAATGAATGAAGCTATTCAAAGCTTATCTTCAAAGCAATGACTGACCTGCATGCAGCAACATCAACCCTCACCTAACCAAAAGAGCTTTTACTAAGGACCGTGTCAGGGTATTGTGCTTGGTTTGCACATGTGGTTATTGCCTTAATTCCAATGTTCTTTTTTTCTCTATGTACAATCAAGTAAAGCCATATCACAATGATGAAGTAATAATGCAATGTTTGTAAAGCATAATTCTCACTGCTCTTATTCTAAATAGGACACCGAATTGAGTAAAAGTCACAACAGTTTCAAATTCTGTGTGATAATATTGAATAAATTTTAATAAATAATATTGAACATTAGATAAACCCTTTGCTTTCCATTGGACAGTTATAGTTGGTAGTATGTCAAAATTGTATTACTTTTTAAAACAAATTCCGCTGTTTTGACCTAAAAGAGTAATTTGCATCTTACTTCACATAAATCAGTATTCTATATTCATAAACGTTGAACTTCCCACATAGAAAATAGTTTAGTATTGGCTGTAGCAGCTTTTTAAAAAGAGATTATATGTTTATATGCCTAAAATATATAGCCTACTTTTATGTCTACTAAGACTGCCTATAGATCTTTATTGGCCCTTGATTTAAAAAAAAATTATAAAATACTTTTAGTTGCAGTTTAATCATGATTCAAGAAAATGAAGCTTGACACATAAAAGGTGCCAAATTAATAAATAAATGAAACTTAAATCATCTTCCTGGGAGATTGAATATTAGTTCTTTGGAGAAGTCGTTCAGGAACTCAGTGCTATAGCAGTGTGATTTCAAACCTGGGTTTATTCCCAGTACTGAGCAATTGCTTATTATGTTGAGCATTACAATAGGTAGTTAGGGAAAGTACAAAGGAAGGAGGTTTGTAATCTAGTGGGTGATCTAAACAAAACTTAGGATACAAGGATATTGTTACATTATAAATTCTTCTGAGAATAATAACCCTATTTGTTCTTTTTGTTGAACTCCCTGGCACAAAGCAGGTATTTAATATATATATGGTGAATGATTGTAGTAAAAATTGAGGGAAAGAAGAGTAAATATCAGTTATAATTCAATGAACAGTTGTTTGGGGGTAAGTGCCAAGGGACATACATGCAAGGTGGTATAAGACACAACCTGACTCTTAGAGAGAGAGGCCTATGTACAAGTGTAGTGTGAGGCGAAAGCAAGATACACTGGTAGAAGGGTAACAGGCCAAGGTAGATTTCTGACATAGATTTTGGAAAAATAACTAACAGCAATAGGATTTGGTAAAGGAAAAGGGGTATAAGTTATTAAAGGAAGAAAATTTGTGAGGAATATATTTTTAAACTTTTAAAGATTGATATATATCATACCATTCATCCTTTTAAACTGTACAATTTAGTGGGTTTTTAGGATATTCACACACTTGTGCAACAGTCACCACAATCAATTTTTGAATATTTTCATCACCCAAAAAGAGAACTTAACACCCATCAGCAGTCAAGCCGTCTTTCCTTTCTTCCTGCCTGTCCCCTGGCAGTCACTAATCTACTTTCTGTCTCTATGGATTTCCCTCTTGGGGGCTTTACGTATGAATGGAATTACACAGTGTGTGGCCCTTTGTGTCTGGCTTCTTTTAATCAACGTACTGTTTTTAAGGTTCACCTGTGTTGTAGCATGAATCAATACTTCATTCTGTTTATGGCTGAATAATCCATTGTTTGGATCTACATTTTGCTTGTCCATTTATCAATTGATGGACATTTGGGTTGTTTTCACCTGTTTACCATTATGAATAAGGCTGCTATGAATATTCACGCACAAACTTTTCTATGGACACAAGTTTTCAATGCTCTTGGCTATAATAATAGGAGTGGAATTGCTGGCAGTAGTATCTTTATGTTTAACTTTTTGAGGATCTGCCAAACTATTTTCCAAAGCAGCTGTACCACTTTACAGTCCTACCATCAGTGAATGAGGCTCCCAGTGTCTTCATTCTTCCCGACACTATCATTGTCTCTTTGATTCTAACCATCCTAGTGGATGTAAAGTGGCATCTCATTGCAGTTTTGATTTGCATTTCCCTAATAACTAATGAATATATTTTCTTGATTGGCCATATTTTCTTGATTGTCCATTTGCATATCTTCTTTGGGAAAATATTAAAATGCCTGTTTTTAAACTGGGTTACTGAGAATTCCCTGGCAATCCAGTGGTTAGGACTCCATGCTGCTGCTGCTAGAGGCCCAGGTTTGATCCCCTGTTTGGGGAACTAAGATCCCACAAGCCACATGGTCCCAAAAAAGATTACGATGTGTGTAAGGCAGGATAGTTATCTCAACACAAATACAGTCGCAATCTTCACTTGGGAAAAAATCCAGGGAGAAACGTCTTACTCAACAGTTACATGTTTTTATATTTGAGAACTTTTATGACTTATAACACTAACTTTAAAAGCATTTTTCTCAATTTTTATAATTTTAACATGTTTATTAGCAGAAATGCAATTTATTTTTAAAATTAGACTCTGGTGACTATCCATGGAAAGTAATGTGTGAGTGTGTGTATAGTTTAATAATTTGTTTTGAAATAATTTCAAATGTATAGAAAAGTTGCCAGGACAGTACAAAGAACTCCCATGTCCTCTTTACCTAGATTCTCATACAGTTAACATTTTATTGGTTCATTACTTACTCTGAGTGTGTGTGTGCGTGCATATGTCTTTTGTTATTGGTCTTTATTTGAACTGTTGGTGGGTTGAGAGAGCAAACTGCAGTCATGCTGTCTCATCACTCCTAAACACTCCAGTGGGTGTTTTCCCCTGAACAGGGTCACTCTTCTACATAATGGCAAACAATCTTCCACATCAGTAAATCAATATTGGTACAATACTACCACCCAATCTAGTAAGCCTATTCAAATTTTGCCCACTATCCCAACAATGTCTCTTCATTTCTGGGTCAACATCCTATACAGAAATACGTACTGCATTTAGTTGTGTATTTTCAGACTCCTTTAATCTGGAAGAGTTGCCAGTCTTTTGTAGCTTTACAGTTTTATTAAAAGGTACAAGCTTTTATTATAGGATGGCTTACAACCTGGGTCCTTTGTCTGTAGGAATACCACAAAATGATGCTTTGCTTTTCTCAGTGAGTCTCATCAGGAGGCATAAAATGTAGACTCGTCCCCACACTGGTGATGTTAACCTTGATCACTTGATCATGCTGGCTTCTTAAATTCACTGTTTTTCCCTTTGTAATTGATTAGTATTCCAAAATCATGCCAGTAAACTACTCCTTATCAAATCTCCACATACCAGCCTTAGCACTGAAGACTCCTGTCTAAATCATCCACTCCTATAGTTGGTGCCAAGTGGTAATTCTCTATTTCAATCATTTCCTCTCCATTATTGGATTGGCATTCAACTGCTATAAAGAGCTTTCCTTTCTCTTCATTATATCAATGTGAACTTGTGTATTCCTATCTTATTCAACAGATTGTAATCCATTATTATTGTTTACTTTGATGTTCAAATTGTCTGATCTGGCCAGTAGCCCCCCTCAAGTGGCTCCTAACAGTGTAACATTTTAAAGTATGTATACTGCTAAGATTCATACACACGGTGAATAGCTATAGTTCATTCATTTCGACTGCTTTGTAATATGCGATTTTTTAAATATATTATCAGTGTATTCATCCTCTCTTCCTTTGGGTTGTTTCCAGGTTTTTGCTATTGTATTTTGCCTTTCCAACTCTGAGGTAATGCTGAATTTCAAATGTATTAAATTTTTCCATTAACATCATATACTTGGGAGTCTGTTTATTGTGTAAATATTGCGCACTAGAAGCAGAGTGGTTTTGCATTCTTCCCAACAATGTGTGAGGCACTTATTTTGCAAATATTGTCTTAGCTGCATTTTTCACGGAGAAAGACTTAAATCATCTGTTTTCAAAATCGTTTAATAAAGATTTTTATCTTTAAATAAA EMBV3_10293 GTCTATTAACTTCTTTTTAACCAAAGCTTTCTGAATATGACCAGCCTCAGGTGCTAGCGC Gene BVT0102_119271 + 0 NULL GK000010.2:49751192-49766410 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013866 TCONS_00013869 TCONS_00013864 TCONS_00013867 TCONS_00013871 TCONS_00013870 1 XLOC_008210 Coding TCONS_00013869 XLOC_008210 Coding Coding RORA 10:49658342-49755261 j TSS10189 5930 1 TCONS_00013869_3 386 0.0239460370994941 10 0.938917435357725 0.00026655017456638 0.000566822260209165 4.14630467923648e-09 7.72386436843024e-05 0.000672313029682216 0.000351391764566511 1.71286619535537e-07 0.00129486852933282 0.00173675235408646 0.000106178243220725 5.27841314824632e-12 1.89201833697925e-05 7.93315126818425e-23 0.000580836088082091 2.34161900294831e-06 4.25291305514362e-08 0 6.14795375338407e-08 0.000809472367847812 0.00082131930825065 8.88957092843673e-05 1.18913621574211e-11 4.0253011274407e-13 1.26230409153952e-11 0.000364449594686537 0.000732565455334716 0.000673198357261435 2.88030184439036e-14 2.79350913143144e-05 9.36911830260712e-07 XM_005211703.1 RORA PREDICTED: Bos taurus RAR-related orphan receptor A (RORA), 0.0 5276 100.00 0.493086003372681 NM_002943.3 RORA Homo sapiens RAR-related orphan receptor A (RORA), transcript 0.0 7032 87.49 0.951939291736931 TCONS_00013869_3 sp|P51448|RORA_MOUSE RORA_MOUSE Nuclear receptor ROR-alpha; 0.0 807 99.48 0.99740932642487 1 coding 0 0 0 0 -0.0871848304980535 0.612697315303999 0.00991959359099188 0.832191484793192 GGTTCTCGCTCACTTTGTAAAACTTCCCTCTTGCTATCAGAGCACAGTTGGGCAGTGGAGTCCTCCAACCCTTCAGTGGTTCTCAAATATCATCAATCTTCACAGTTAGCTGAGAAACATTTGAAAAACAAATGCCCAGTCTCCATCCCTACCTGCCTGGTTCTGATTCTGATAGTCTGGGCTGAGGCCAAGGAATGTGAACCTGTAAAAGCCCCCCTTGGGGACTGAGGATCTGACATGTTTGAAAACTGCTGCTCTGGTCTCACCCTCTCCTGGTCCCCGTGAGCTCAAATTGAAATTATTCCATGCAAGATCTGTGGAGACAAATCATCAGGAATCCATTACGGTGTCATTACATGTGAAGGCTGCAAGGGCTTTTTCAGGAGAAGTCAGCAAAGCAATGCCACCTACTCCTGTCCTCGTCAAAAGAACTGTTTGATTGATCGAACCAGTAGAAACCGCTGCCAGCACTGTCGATTACAGAAATGCCTTGCCGTGGGGATGTCTCGAGATGCTGTAAAATTTGGCCGCATGTCGAAAAAGCAGAGAGACAGCTTGTATGCAGAAGTACAGAAGCACCGGATGCAGCAGCAGCAGCGAGACCACCAACAGCAGCCTGGAGAGGCCGAGCCGCTGACTCCCACCTATAACATCTCGGCCAACGGGCTCACGGAGCTTCACGATGACCTCAGCAACTACATCGACGGGCACACCCCCGAGGGCAGCAAGGCAGACTCTGCCGTCAGCAGCTTCTACCTGGACATACAGCCTTCCCCGGACCAGTCAGGTCTTGATATCAATGGAATCAAACCAGAACCCATATGTGACTACACACCAGCATCAGGCTTCTTCCCCTACTGCTCTTTCACCAATGGAGAGACTTCCCCAACTGTGTCCATGGCAGAACTAGAACACCTTGCACAGAATATATCTAAATCACATCTGGAAACTTGCCAATACTTGAGAGAAGAGCTCCAGCAGATAACGTGGCAGACCTTTCTGCAGGAGGAGATTGAGAATTATCAAAACAAGCAGCGGGAGGTGATGTGGCAATTGTGTGCCATCAAAATTACAGAAGCTATACAGTACGTGGTGGAGTTTGCCAAACGCATTGATGGATTTATGGAACTATGTCAAAACGATCAAATTGTGCTTCTCAAAGCAGGTTCTCTAGAGGTGGTATTTATCAGAATGTGCCGTGCCTTTGACTCTCAGAACAATACCGTGTACTTCGATGGGAAATATGCTAGCCCCGATGTCTTCAAATCCTTAGGTTGTGAAGACTTTATTAGCTTTGTGTTTGAATTTGGAAAGAGTTTATGTTCTATGCACCTGACTGAAGATGAAATTGCATTATTTTCTGCATTTGTCCTGATGTCAGCAGATCGCTCATGGCTGCAGGAAAAGGTAAAAATTGAAAAGCTGCAACAGAAAATTCAGCTAGCTCTTCAACATGTCCTACAGAAGAATCACCGAGAAGATGGAATACTAACAAAGTTAATATGCAAGGTGTCTACATTAAGAGCCTTATGTGGACGGCATACAGAAAAGCTCATGGCGTTTAAAGCAATATACCCAGACATTGTGCGACTTCATTTTCCTCCATTATACAAGGAGTTGTTCACTTCAGAATTTGAGCCAGCCATGCAGATTGATGGGTAAATGTATCACCTAAGCACTTCTAGAATGTCTGAAGTCCAAACAATGAAAAGCAAACAAACAAATCAATTAACCGAGACACTTTATATGGCCCTGCACAGACCTGGAGCGCCAACACGCTGCACATCCTTTGGTGATCGGGGTCAGGCAAAGGAGGGGAAACAATGAAAACAAATAAAAGTTGAACTTGTTTTTCTCATGCATATGATTTCCATTATGCCTACAGATATGGACCCTTTTTCTGTCTCGACTTCTTGATCGTTGACCTCTGTTTACAACAGAAGGCGGGTACTAAAGTTGGAAGATGTCCTTTTCTTGTAGCTCACTGCCCACAGACTTTCTACAGAATCACCCATCTGTCGGTAACCACAGAGGGTCCAGCACTAATCGGTGACTGGTGTGCATAGCGGAGGTTGCGGCATTACTTTGCACAACTTGCTCTTTGTCTCATGAAGGAAGTTTTTATTTTTTTCACCGATTATTGCCAGTCAGCAGGACGGCACGAAAAGGGTCCATGGCACTAGCAACAATAGCATTATAATATATTACAGGGTAAATGGGCATGAAGACTATATATAGCTAAAAAGAGATATTGTTTATATATTGTTTTAATTAATATAAAATGTAGTTACTGGAGTAGCTTTTCCTGTTGAATTGATAAGGCACTTTCATTTTGCACCTTTTTTCTTTAAATTAAATGCTAGCGTGTTCACTGTCGTGTCGCATGTGCACCAGAAACACAAGTTTAACTGAGAAGGCTTGGAAGGTACGTCGGGAGGTATTTATGCTGCTGTTTACACAATTATTTTTAAAAGACTGGCTGGTCATATCTAGAAATCATGCTGTTGGATTCATTTTTTTTTTTTTTTACACGTGAATTTGGAATTAGACACAGAACTCTCCCTAAATTGTCCTTTGCTTTTTGGATGAGTTTAAGGATAGATGTGTTTATGCTTCATACAAAGTTGAGTGATTGATTAGGGTGGATTTACGCCCTCGTGCATAGTATTTATCCAAAGCTTTTGAGCATGCCACCTCATGGAGCTTGGGGAGTGGGGGGTGCTCATTTCACACAGTTGAGTAGACTCAGTCTCAACTTGGAATTCTTAGGCTTTAAGAACAGATCAGTAACCAGAATATTTATCAGAATCTAGCTTTTAGTAGAAGAAGGACCCAAAGAGTTTGTCTGGAGCAAACGCACACTCCCCATGTGTGAAGACATGAAGCATTTACTTCGTGAATGTTTATGTTCTTGGTATCATCTAGGAACCCTGAGACTTTCAGAGTGAATGGTTTCTAGACTAACTGCCTCTCCATGGTGTCATTCTAGAACACTCTTCTCCATATGTCACAGTCAATGGACAGGAAGGCAAAGGAAACATACAATGTTGAACCAGTTTCTCTTATTTAAATGTTAACTATTGTTAAGTCTTTAAAGTGAAGTCGATGCAAGCTGCAAACATTTTCTTTTGTATTTATCTTCACTAGAAAACTGTGGACTGTAATTTATTTTATTAAATCTTTAGAAGACAGTTTGGCTTTTGGATTCAGGTGAGAAATATTGAGTTGTTTTTGTTTAATTTTGTGTATGTGTGTGTCTTTTGATTTTTACATAATTCCCAGTAGGGGGGAAGGGGAAAGGAACAGTCTGATAAGACAAGTGTGCATATTCTAAAATAAGTGACCTTTGGGAATGTAGGCGTTTAGAAGATTTTAGTCACACTTGAAGTGGGATTCAAACCTCTGGCCTGACATCAAAGACCATGTCTATAGAGTAGAGAGAACATCTTCCCATAGTGTAAAGGTGAACATTTCCTAGCACCCTTTTACAGGGAAGAAAGGATCTCCTCTACCACCAGGGTTTCTTCCCCCGTCCTCCAATCTTCTGCAGGAATTCAACTCCTGCTGGGTCACCCAGAGCCCTCCACTCTGTTTTTAACTCCACTGATGTTCTGACTTGTTTCCTGAGGGACTTGGAAAAGGGGAAGGAACTATTCACACAGAAGTGTGTATGAAGCCTAAATAACATCTTTTAAAAAAAGTTTTTTTAAAAAAATACAGTAAGGGTATAAGCATGAGTAGAAGATGAGAATAGTATTTACTTAAATTTCTTACAAGCATATAAAACTTTATGTGACTTTATATAGAGAGGTAACTACCAGCATATAGTATTTATATTTGGGCAAGAAGGGTTAAATCAAATTTTTAATTTAAATAAATATAGTTCCTTGAAAAATCAATAGTATTTATACTCTGAATAGAGTACCAACTTTAGTTCAGTTATTTATTCATCCTTTTTTTTTCCCCCTGTTGTTTCTCCTGTTGGGAAGAAACAGTGTGTTTTGTTTGGGTTTGGGTTTGTTTTTGTTTCTTTGTCATTTTGATTCACTAAATTTGGGGGTGATTTTGTTAAAGTCTATTAACTTCTTTTTAACCAAAGCTTTCTGAATATGACCAGCCTCAGGTGCTAGCGCATTAAAGAGCAACTAAACCTAATTCCAGTGTCCATTTGTGAAATGATGAGAGCTAATTGGACTTCTCTGAGGGTGAGAGAGAATACAATGTTGAACATAAATTTCTTTTCCCAGAAAGGATTTTGCATGTACCTAATGCAAAAAAAAAAAACAAACAAACAAAAAATGACGCTCTAATCTCAGTAAGTCACTCCATGGTGACGTTGCTTTTGGAGTAAACCAAGATACATTGACATGATGCTGCTACCAGGTCTTTGTGAAAGAAAACAGGGTGTGGACTTTAAGACGAAGTACATCGACAGTGTAGGAACAGAGTAGTAGAGGCGCGCTCGGTGAAATGAGGGAACAACTATTATACGGATCGAAGTTGGGATCTGAAGTTAAACAGTTTTTGTTGAAAAAATATGAAGTGCAGAGAAGGATGTGAAAAACTTTGTATTTTTATTTTCTTCCTTATTATAGAAATACCTGTGTGATGACACAAAATACTTGCTGATATAGAACAATTATTCTTAATCGTTCTTGTAATTAAAATTGCCTAAACTCAAATGTCCAATAGTCTTTTAAAGATTGGAATCACATCATTGTTATCCTGACTGCTGTGATGCCTCTTATACAATTTTTAAACGTCTGGTAAATAAGGCTTTTGCACAAAGCCTGAATACCTTGGGTTACAGTGGTGTCCAAATGGTTGCACTGTGTAGTGAAGAAACTGGCCTTGGTCACAATGAAATCAAAAGTGCAGATGAAAGTGCTTTTGGGGGCAGTTTGCAAATTGTGGTTAAAGCTATGGATTTTTTTTTTTTAAGTGTTCAGCATCCTAATTTGCTTTAAAGGTGTGGATTTTTTTTTAAGTCTTCAGCATCCTAATTCACCCTTTCTAACTTAAAGAAAACATTACTTAAGACACTGCTTCTAAGTTTGGTTGTTCTTTATAGTGTGGATATTCAGATCTCTGTGAGCGTATGGGGATGGGCTGAGGGTCAGGTGAGGAGGGAGTGTGTGTGTGTGTGTGTGTGTGCACGCGTGCGTGTGGTTTTTGTATGTATGATGTGTATGTGTCGGACCGCTTCTAGGCTACTAAGTGTCAATGGAAAAGAAAATGTATTCAAAATACTTAAATCAAAACTAGAAGATGGAAAAAAAAAGATTTATTCTATACAAAGCCTTGTCTGGACCACTTTAGAGAGACTTCTATTTTTTTAACCCTTCTATAAATATTTGATGGCACTTGAAATATTCCTGCAATAAAATGTGATTTGTGTAAAGAAAAAAAAGATTTTGTAATGTGAAACAAAGAAAGAAAGTAATGTAATTTTCTAAAAAAAGAAATACAAACAAACAAACTTTGTATTATTTTCTTGATGGAATTTGTCTATCTGTCTTTGGAGAACTTTTTATTTCATTGAATGTGCCATAGTAGAAATACGTGTTTTTAGTTTTAGACTTAAGGAATAGCTGTTTGTGTTCCGACATTCCAAAATGCAAAACAGCCTAGTAGAATCTTTAATGAAAAGGTTTAAGTAGGAGGTAAGCTTCTCTCATTGTTGCTTTTTTGCACATGTTCTTCATTCCTCTCTAGTGCAATATGTACATAGAGCACTTCCAGGTGTACTTTGATCCCTCAGGGAAAATTACATATTTGTACAGTTTTTTTGGTTTTGTTTCATGGTTTTGTTTTTTTTTTTGCCTTTTGTTTTTGGCTAAGGAATGTCGATTGAATCACTTGTTATTGTTGAGGGGCAGCCAGATAATAATCCTAAAGCCACTGTTTCCAACATTGATTGTTTAAATCAT EMBV3_32634 GAAAGGCATACCTTGCGGGTTCCATCAAAGGACTCTGCCTGCCCTGGTATGGCATCGGCA Variant GeneID:534370|FAM45A:NM_001076902:20_cdna 521^632 2 EMBV3_34426 GeneID:534370 26 GENE FAM45A MGC142581 family with sequence similarity 45, member A EMBV3_30973 TCAAATAACATTTTTTGTTGTAGGAACGGGAGTGGGGTGAGCCTCAAAGGCCTGTGTGAC Gene GeneID:507035|MGC152585:NM_001098896:83_cdna Constitutive 0 NULL GeneID:507035 10 GENE MGC152585 NULL hypothetical LOC507035 EMBV3_06259 GCCTACCCCCAGCAGAGCCCGTATGCACAGGTACCCTGCTGACTGCCCACTCCCCAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09992 CCAAAATAGCACAGGGTTTGGAGAAGAATAAAACTGTCAACCCGTTACCTGGGAAGGCTG Gene GeneID:282224|ETAA1:NM_001075128:14_cdna Constitutive 0 NULL GeneID:282224 11 GENE ETAA1 ETAA16 Ewing tumor-associated antigen 1 EMBV3_29922 GCAGCAGGCTTATTACCCTTGACTTGTAATTCATCAAAGGGGCCATCCTTGACAAGTCTG Gene BVV0102_208329 - 1 EMBV3_03729 GK000024.2:4559650-5357672 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138474 TCONS_00138476 TCONS_00138477 1 XLOC_084645 NonCoding TCONS_00138474 XLOC_084645 NonCoding NonCoding - 24:4691180-4700868 - TSS103746 1287 3 TCONS_00138474_4 126 0.0326340326340326 4 0.867554454423454 2.43139568582982e-06 0 0.000648373887536574 1.40694329677434e-10 0 3.59661152939933e-12 0 0 4.64587757784856e-17 0 0 0 7.515522360332e-11 0 0 0 0 0 0 1.92467169675113e-10 1.83888509828881e-12 0 0 0 3.99775544736347e-08 2.48528160231585e-10 2.9070554573074e-08 0 0 0 XM_005195422.1 LOC101903509 PREDICTED: Bos taurus aurora kinase C-like (LOC101903509), mRNA. 2e-10 71.6 90.38 0.0396270396270396 0 noncoding 0 0 0 0 -0.0109552896299464 0.915733775298173 0.0211031815128764 0.661766393463727 TGCAGGCGGACTCTTTACCAGCTGAGCCACCAGGGAAGCCCTGATTCACTAGAACCCTGGCCATGCGATCTGTGCCTGGAGACCTGGGATCTGAGCCCCCGTCCACTGATGAGGCTGCATGTCAGCGGACCCCCAGCTGGAATTGTGGAAGGTCTTCTGCAAAGGCTTAGCCTCAGCACACCAAGCACATCCGGAAATGTTTCAGCAAACATACAAAACTCCTCCTCCGTCCTGTCCTGTAAGTGGCCCCAAGGTGCATCACAGAACCGCCGCTCCCCGTTTCTCCTCCAGGTGCGTCTGCCCGCTCTGCCTGCCCAGACTCCGTGGAGATGCAGGAGGGGGACAGCATCCGCCGCGTGGCAGCTGGGGTCCCAGGCCTGGACAGGCCGGTTCCAGCTCTCGGAGGCTCCTCCTTGGCACAGCCTGGAAGAGAGACATGATGGATGCTTTGACCGCTGCCTCCCAGCGAGGACGCATCGCTGACTCCGCTGCTTATTGACTCTGGCCCGGCTGCAATCTGGTTCGAAGGACATGGGGACTTGCTGACCCCTCCAAGGCGGAGTTAGACTCTGGGAAGTTGTGGTTTTGCAAACCCGGAGTTCTCCAGGCCAGGAGCACCCAGGACTGGGCAATGCGACTACCCCCATGAGACAGCTGACTCCATAATGACTGCATTAAGGAAGGAAGGGAAGGGGCAAAGACCAGGCCTTCTCACTCTGCAGCGACGGCTGCTGTTGCTTTTCAAAATTCCTTCTGCTATTTTTTTCCCCAAATCTACAGCACAGATGTGGTGCCTCGTGAGCAGTTTGCACCGAGCAGGTTGGAGCCCGGCCAGTGACCTACTGAGTGACCGGCTGAGTGAGTGCAGCTTTTGCGGAGGGCTTGCTCTGGGTTACTGGGGGACAGGCAGCCTGTCCTTCCCCTTCCCCAGTCCTGCGGAGGAGTGGAGACCCCGTCTCTCTCGGTAGCAGCCCGGGCTGGAGGCTGCCTTCTTATGGAGTGGACAGGCCTGGAGACTCCCAGACTTGTCAAGGATGGCCCCTTTGATGAATTACAAGTCAAGGGTAATAAGCCTGCTGCAACTTTGACTGTGTTTGTCTATGTAAGATATATTCAATCAGCCATTTGGTACACTTTCTGTTATATGCTGGTTTCTTGGTTTTTTTCCTCCATTAGATGAATAAAGCCATGCTAGTTTCTTTTCATGGCTTCTGGCCCGGACTCCCCGCCACTCCCTAGGAAGGCTCTTTGTTTCAGCCACTCTGCGTACCTGGAGCCGGGCTCTTC TCONS_00138459 TCONS_00138461 TCONS_00138462 TCONS_00138464 TCONS_00138465 TCONS_00138466 TCONS_00138467 TCONS_00138468 TCONS_00138469 TCONS_00138470 TCONS_00138471 TCONS_00138472 TCONS_00138473 s 3' 131442 TCONS_00138459 TCONS_00138461 TCONS_00138462 TCONS_00138464 TCONS_00138465 TCONS_00138466 TCONS_00138467 TCONS_00138468 TCONS_00138469 TCONS_00138470 TCONS_00138471 TCONS_00138472 TCONS_00138473 s 3' 131442 EMBV3_30059 CACAGCTGCACAATAACCACATATTAACATCTCCCCCATTGGTCCGGATGTCTGGTTCCC Gene BVT0102_042242 + 0 NULL GK000012.2:90402671-90438565 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037575 TCONS_00035983 TCONS_00035989 TCONS_00035981 TCONS_00035984 TCONS_00035993 TCONS_00035992 TCONS_00037576 TCONS_00035994 TCONS_00035991 TCONS_00035990 2 XLOC_021420 XLOC_021050 Coding TCONS_00035993 XLOC_021050 Coding Coding ATP11A 12:90370069-90408690 j TSS26292 6148 1 TCONS_00035993_4 835 20 0.841325737959606 0.00257584624785403 0.000948693995610526 0.000800004265453374 0.000538368782107572 0.000961615838325615 0.000465368920921408 0.000498719044502544 0.000907568391763401 0.000643470649029071 0.000119425520928311 1.78688954324967e-05 5.35037682090505e-05 6.48306045742605e-05 2.47903309349469e-09 0.00033612171045448 0.0014293455061022 0.000448013253148527 9.27872581699774e-05 0.000838157956571105 0.00189978438529048 0.00165937901894413 0.00111332978037514 0.00118928769855502 0.000149077686248832 0.0018685491312861 0.000827441479266296 0.000849279145904729 0.00121039447182118 0.000121561403731621 0.000879958654707536 XM_005194228.1 ATP11A PREDICTED: Bos taurus ATPase, class VI, type 11A (ATP11A), 0.0 1.023e+04 100.00 0.922413793103448 XM_005268305.1 ATP11A PREDICTED: Homo sapiens ATPase, class VI, type 11A (ATP11A), 0.0 2755 84.86 0.399479505530254 TCONS_00035993_4 sp|P98196|AT11A_HUMAN AT11A_HUMAN Probable phospholipid-transporting ATPase IH; 0.0 1582 91.44 0.978443113772455 3 coding 1 1 1 1 0.49086419221325 0.273474572469366 -0.138795235216049 0.440788133206504 ACTCAGCAGTTTTCCTACTCAAGGCGTTCGCTCATTCCCTCCTGCCTTCCTCCAGATCGATGAACGTGTTCCTCGTCGTGTACCTGTGCATCCTTATCAGCAAGGCACTCATCAACACCACGCTGAAGTACGTGTGGCAGAGCGAGCCGTCCCGGGACGAGCCGTGGTACAACCGGAAGACGGAGGCGGAGAGACAGAGGAACCTGTTCCTCAGAGCCTTCACGGACTTCCTGGCCTTCATGGTTCTCTTCAACTACATCATTCCCGTGTCCATGTACGTCACCGTGGAGTTGCAGAAGTTCCTGGGCTCCTACTTCCTCACCTGGGACGAGGACATGTTTGACGAGGAGATGGGGGAAGGGCCGCTGGTCAACACCTCGGATCTGAACGAGGAGCTGGGGCAGGTGGAGTATGTGTTCACGGACAAGACGGGCACCCTCACGGAGAACAACATGGAGTTCAAGGAGTGCTGTGTGGAGGGCCACGTGTGCGTGCCGCACGCCGTCTGCAATGGCCAGGTGCTCCCCGACGCCTCCGCCATCGACATGATCGACGCCTCCCCGGGCGCCAGTGGGCGGGAGCGGGAGGAGCTGTTTTTCCGGGCCCTCTGTCTCTGCCACACCATCCAGGTGAAGGATGACGATGAGGTGGATGGGCCCCAGAAGTCACCAGACTCGGGGAAGCGCTCTGCATACATCTCGTCCTCGCCCGACGAGGTGGCCCTGGTCGAGGGCATCCAGAGATTTGGTTTCACGTACCTGAGGCTGAAGGACAATTACATGGAGCTGCTGAACAGGGACAATGACATCGAGAGGTTTGAGTTGCTGGAAATCTTGAGTTTCGACTCAGTAAGAAGGCGGATGAGTGTAATCGTCAAGTCTGCTACAGGAGAAATTTACCTGTTTTGCAAAGGAGCAGATTCTTCCATATTTCCCCGAGTGACAGAAGGCAAAGTGGACCAGATCCAATCCAGAGTGGAGCGCAACGCAGTGGAGGGGCTCCGGACCCTGTGTGTGGCCTATAAGACACTCATCCCGGAAGAGTACGAAGGCATCCGCGAGCTGCTGCAGGACGCCAAGGTGGCGCTTCAGGACCGAGACAAGAAATTAGCAGAAGCCTACGAGCAAATAGAGACAGATCTGGTCCTGCTCGGCGCCACAGCTGTGGAGGATCGGCTGCAGGAGAAGGCGGCCGACACCATCGAGGCGCTGCAGAAGGCGGGCATCAAGGTGTGGGTGCTCACGGGCGACAAGATGGAGACAGCGGCCGCCACCTGCTACGCCTGCAAGCTCTTCCGCAGGAACACGCAGCTGCTCGAGGTCACCACCAAGCGGCTGGAGGAGCAGAGCCTGCACGACGTGCTCTTCGAGCTGAGCAAGACGGTGCTGCGCTCCAGCGCCAGCCTCACCCGGGACAACTTCTCAGGACTCTCAGCCGACATGCAGGACTACGGTTTAATCATCGACGGAGCCGCGCTGTCCTTGATCATGAAGCCTCGGGAGGACGGGAGCTCCAGTAACTACCGCGAGTTGTTCCTGGACATCTGCCGGAACTGCAGCGCTGTGCTTTGCTGCCGCATGGCCCCGCTGCAGAAGGCCCAGATTGTTAAGTTAATCAAGCTTTCAAAGGAGCACCCGATCACCTTGGCGATTGGTGACGGAGCGAATGATGTCAGCATGATCCTGGAGGCCCACGTGGGCATCGGCGTCATTGGGAAGGAAGGTCGTCAGGCTGCAAGGAACAGCGACTACGCGATACCCAAGTTTAAGCATTTAAAGAAGATGCTGCTGGTTCATGGGCATTTTTACTATATTCGAATATCCGAGCTTGTGCAATACTTCTTTTATAAGAACGTCTGCTTCATTTTCCCTCAGTTTTTATACCAGTTCTTCTGTGGGTTTTCACAGCAGACGCTGTACGACACTGCCTACCTGACGCTCTACAACATCAGCTTCACCTCCCTCCCCATCCTGCTCTACAGCCTGATGGAGCAGCACGTCGCCATGGACACGCTCAAGAGGGACCCTGCCCTCTACAGGGACATCGCCAAGAACGCGCTCCTCCGCTGGCGCGCGTTCATCTACTGGACGCTCTTGGGCTTGTTCAACGCGCTGGTGTTCTTCTTCGGTGCTTACTTCATGTTTGAAAACACGACTGTGACCAGCAACGGGCAGGTGTTTGGAAACTGGACGTTCGGGACCCTGGTGTTCACGGTGATGGTGCTCACAGTCACCCTGAAGCTGGCACTGGATACCCACTACTGGACCTGGGTCAACCACTTTGTCATCTGGGGGTCGCTGCTGTTCTACATCGTCTTTTCCCTCCTCTGGGGAGGAGTCATCTGGCCCTTCCTCAGTTATCAAAGGATGTACTACGTATTCATACAGATGTTGTCCAGCGGCCCTGCCTGGCTGGCCATCGTCCTGCTGGTCACCGTCAGCCTGCTGCCTGACGTCCTCAAGAAGGTGCTGTGCAGGCAGCTGTGGCCCAGTGCCACCGAGAGAGTGCAGACCTCGCGCTTCGTGTCAGGACTGCCTCTGGGGAGTCACCCACTTGCTACTCTGTAGTCTCCAACCCCGGGCAGCGCCCTGGAAGGCAGGGAACGCGGGGCCCCTCCTGCTAGTCTCCCACCACCCGCGGCCCCAGAGGAGGCCACACGCAAGGGTCCAGCCCCGAAGGGCTGCGTGGCGTGTGCTGCTCTTGCGGCCGGAGGAGGAGGAAGATGGGACAGGCGTCCCTGAGTGGCGACCGAGAAGGACACGCACGAGCCCGCTACCCTCCCTGACCGCGTGGCGACGGGAGGACCTTTGCTCAAGGGTCTCTGTCCGCTCCAAGCACAGCCGCCCTACCAGGGCCTCCGGGGAGCATGGCCGAGCCTCGCGGGCTGGGGTCCGATCTGCTCCATCCTCCCGAGCCCGACACCTCTGCTTTCGGACTGGCCCCCCGCCCCGTCCACAGCTGCCGTCCAGACCTGCGCGTGGTGACGCTGACCGCGGGTCACATCTGGCCCGACTCCGCCCCTCCGGGGGAGGTGCTGCCCGCGTGCTCGGGGAGCCCCCTCCCCGTACCCCGCTGCCTCTGGGGGGGCCTGGCCTGTAAAGCACAGGTTCCGAGAGGTGCCCCTTCCCGCTCCGAGGGCGCAGGCGCGGTTTGCTGTTGTGGGACGGGTGTTTCGGGGTTTGCGGGGACGCGTGGGGGTCTGGGTACCCGGGGCCGGCCTCTGCTGCGGTGCTCAGACCCCCACGGGGAGCGGCCTCTCGGGGGCGTGGACCCCCAGATCCGCACCTGGCCCGGGGTCGCCGAGGCGGCCCGGGAGACCTAAGAGCAATACCGCTGCCCGCGTGCCGCCCGCAGGCAGCCGGGCGGTAAACCCCGTCGCTCTCCTGTAACGGAATCTCCGTTTCTAGAAATAACCGGTTCGACGCAGCCTTAATGGTCCGTAAGGAAAACATTTCAGTTTGAGGTTCAAACTTCAGAAGGTACAACTGACGGCGTTTTAGGGGAGGGTCACCCGGAGGCTGAACGTTGCCCCCGCTGGATGCCCTGTGGATGCGGGACGGTGCTGAGCCCACCTGGGTCTGCTCCCGAGTCGCTCAGACCGCGTGGTTCGCTGCTGTAATGCTCACCTGTGAGATACTTGAACGAGGGGAGGAGTTGACCGCAAGAACAGGGTACACGGGTGGTGCGGAGAAAGCGGGTGACGGGCAAGCATACCAAAGAGCGGGGTGACGCCGAGGGGCCGTGAGGCTGGGTGGGCGTCCGCCCGAGGGCCCGCCCCCTCGCCGTCACTCACGCCCGCGTCCTGCGTGAGGCCCGCACCAGACCCTGCAAACAGCCGTGTGTGCGTTTGTACAGCCGTTTTTAAGAACCTAAAATGGGTATAAATGTCTTACCTGTGGGGGCAGATTCTCTGTATGTTTTAGTTAACAAATTCTTTGTAATGTATTTTTTTAGAGATCTTAAAATTGCCTTTGCACTGAAGTATTTTCATAGCTGTTTATATCTATTTTATTCGTTTATTTGTTAACGTACCATATCTAATTTTTAAAGTATGTTTTTAAAGCTTTTATTTTTTAAGTTGAAGACATTTTGGCCACTTCACATTTAAATTCTGATGGACGTTTTGGCTGAATGTCTCAATATCTGATGAATGTGAATTTTCAGATTTGACTTTATTCTCTGAACCTGTTTTGTTTTTTGGTGTTTCTGGCGGTAGCGAGTAGTTACAAGGCGTATTTAGAGTCTGATCATTTGCTCTGCTCTTTCTTCACCGTTCATTGCAATTTCATCTGCTTTTTCTTTAGTTTTTAGTTTCTATCCTTCAGCCTTAAAACAGAAGCTTCTTGACGGTTCGCTGTCCTCTTTTCTGCCTGTATCCAGACGGTTATCACTTACCTCGGATAATTCAAGTCTCCTTAGGACAGCTACTGACCGTTACACGCCCCAATACGTCTTCTTAAAATTGTTTGGGAAGTTCCTAAGTGACTGCGCCTGACAATGTGAGATGGACCAGGGCCATGAGACCAGAAGCCAGGGAAGGACGAGAACCAGGGAAGGGACATTTCAGACAAGACACTGAGACTCCCACCTGGCGGTGGGCAGTGCTTACTTGCCTTAAACTGACCTTAAAGCAAGTAGTTTAGGTATCTTCCTTAGTTTTGAAAATCTTACTCACAGCTGCACAATAACCACATATTAACATCTCCCCCATTGGTCCGGATGTCTGGTTCCCACTGGAGGGGACCCGCCCTGGGACCAGGGCCGGACCCTCCCAGCTGCAGCCACGTCCCGGCTGGGAGAAGGGACGCGCTCTCGGCCACTCCTGTTAGAACCCCAGTCAGCCCGTTCCTGTGCCCTTGACTCCACGGGCAGACACAGACCAAACGGCCCCCAGGGCCACGGCCGCGAGGCTCGCTGGGGGCGGAGCTTCCGCAGTGACGCCGCAGACGCCTAGTTGGCCTTGTGAGACTTCGCAGCTTGAACTGTAGCAATGCCTCGCACACAGTGTAACTATTCTTAAATTCACGGACATCAACCACAAGTTCAGGGCAACCTAAGGGGAGTTTCCAGCCTTTTTCTTTAAAACCACTGAGTTCACCTGTTTTGCACTGATTATGAAGAACCTAATGCAACCACTTCTGCTTATCTTGAAATTAATGGTATTTATTTAACAACTCAGTGTAACAGCTTGGTATGCACTTTCTTTTGGAAGTTTCCCATTTCTAATTTTAAAAACAGGAAAAATGTCAGCTGGCAAATGCATTCATTCTGTTTTGTTTTTTTTAGTAAGTTAGAGGGTAGGTGAATGGGGGTGAGAACCGTTTTGATGTCCATAAACAAAGCTTTAATGAAGATGTGTCGGAGTATTATTAAAGTGTGATTCTACTTTTGCAGAAAAAAATCTAAAGATCAGTTTATATAGCTTTATTTTTTACCTTATCAAAATATACAGAATTTTAATATGCATATAATGTCTCTGACTTAAAATTATGTGCGTCTGCATTGCTGTTTAAAATGTTCATTCATTATGTAGTGTGATAAAGAAAATCTTCAAAAATATATTTAACACAAATGGTATCTATAGGTATTGTCATCATAAATATTGGAATTTATTTTTAAATTATTGAATATAGTAGGTGTGTTTAAGATAATAAATCAACCTCTGAACAGTAATGTTTAATTGATTATTAATCTGCTTTGAAAAATTAAATGGTGAATTAAACCAAATCTTAAGTATTTATCTTCAAATATTCATTATGATTGGACTTTTCTGCAGAACGTCTAGGCGGGAGATCTGAATCTGCTTGCAATAAAGAAGAAAAAGTTCTGGTTTAGTCTCTTCATAGATTAAAAAGATGACAGAAGTTGGCATTAAGTTTCTCCCAAGACCAGCTGCCGGGCAAACAGTCTCCCAGCGAGTGTTTCTGTTTGGGATGAAGCCGTGGGAGCAGCCTCTCAGGATTGTGTGGGATGGGGTGGCCCCGGGCCCACAGCTGCACCGCCAGGGCGGAGGGCCCGGAGCAGGACACTCCGGCCGAACCCTGTCCTTCCCGCTGCTGCCCGACTGTCCGCCAGACCCCGTCCTCCAGGGGCTCCTCCACTCCTCCTCTTGTCCAAACCCTGGCCCCCACGCCCAGGGCTCCTGGGC EMBV3_33351 CCTAAACCTACTCATCCGGAAGGACGGCCGGACAGTAAACCTGGGTGGGAAGACCTCGGT Gene GeneID:408006|OPLAH:NM_001001173:29_cdna Constitutive 0 NULL GeneID:408006 14 GENE OPLAH 5-OPase 5-oxoprolinase (ATP-hydrolysing) EMBV3_20624 CATCATCTCGGACAAGCACTTCTACTTCAACCAGACCAAGGGCTTCCCCTGCCTCAAGAA Gene GeneID:521959|HS3ST3A1:XM_002695813:161_cdna Constitutive 0 NULL GeneID:521959 19 GENE HS3ST3A1 NULL heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 EMBV3_02047 GCAGTGCTTTGTATCTCCTCAGCGTTTTAGAGGCGAGAGTAAACCGTCAGTTCTAGGGAA Gene GeneID:615685|LOC615685:NM_001101246:34_cdna UTR3_Alt 1 NULL GeneID:615685 4 GENE LOC615685 NULL UPF0452 protein C7orf41 homolog EMBV3_40064 GGGAATCGAAATAGCGAAATGGACTCCCACCTATGTCGCTGGTGAAAGAAATCCTCGAGG Gene GeneID:533581|CMYA5:XM_002690519:528_cdna Constitutive 0 NULL GeneID:533581 10 GENE CMYA5 NULL cardiomyopathy associated 5 EMBV3_37572 ACTCTGCCATCGGTGGGAAAGCAGACACAGATGACACAGAAATGAATAAACGTGGCTGCG Gene BVT0102_002370 + 0 NULL GK000016.2:72832975-73013320 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068223 1 XLOC_041621 NonCoding TCONS_00068223 XLOC_041621 NonCoding NonCoding - 16:72968767-72970906 - TSS51120 721 2 TCONS_00068223_2 51 0.644937586685159 3 0.664172123479888 0.00031716198674939 0.000426563102590036 0.000749891394375384 3.42211858208644e-11 4.50402399771016e-05 6.79609081228192e-06 6.00856382175149e-05 2.82381901956876e-11 5.42839593257445e-11 0 9.00042692631724e-12 0 0 0 0 0 0 0 0.00357497963778552 0.00556965726650127 0.00156042584304085 0 0 0 0.00212784384495657 0.00309686981259534 0.000834022551899199 0 0 0 XR_228861.1 LOC101905848 PREDICTED: Bos taurus uncharacterized LOC101905848 (LOC101905848), 4e-10 69.8 74.14 0.148404993065187 NM_182503.2 ADAT2 Homo sapiens adenosine deaminase, tRNA-specific 2 (ADAT2), mRNA. 5e-16 89.7 73.97 0.198335644937587 0 noncoding 0 0 0 0 -1.43716810504308 0.0091021900999205 -0.00159582809610806 0.977096348094658 CGCAAATGTTTGTTTCCGCTGATGAGTCTTGCTTAAAACAATCACGACCGTGGGTGTCTGCCAAGGGTGGTTTTCTATTTCCTTCACGCCTTCGAATATTCAACAGTCAGAATTTTTTCTGGATTGTATCCGGGGAGGTGGTTTGACCCTCAGAGCTATGGAGTGACGAAACCCCTCGGCCTGGAGACCATCTAAGCGAGACTGGCTATCGTTTGGACTGGTTTGCTGTTGTTTTTTTCAACCCAGGGCCTCGGTAAAGTCTTGCAGGGATGCCCAATAGGTCATAGGGCCTCTTTCAACTCTGCCATCGGTGGGAAAGCAGACACAGATGACACAGAAATGAATAAACGTGGCTGCGTTCCAATGAAGCTTCATTTATGGACCCTGAAATTTGAATATCATGTAATTTTCACATATCACAAAATATTCTCCATTTTTTCCAAACATTTAGAAAAGTGTAAACCACGTTACCTCACACGCAATACAAAAATGTAGTATTTCAATGTTCAGATAAACCGTAACATATTCAAACGCTATCCTGTTGGTGGACTTCCAGCCTAGTTCCAGGCCTTTGCTATTACAGAAAATACTTCGGTGTAGACACCTGCCCATACATCATGCCACATACAGGTGACGTCTCTGTAGGATACATCTGGGGACAAGTTTGATCAAATCTGAACAGGCTTTCTACTCCTCCCAGGCACCTCCATCCCTTCCTCCT TCONS_00068226 s 5' 42415 TCONS_00068226 s 5' 44553 EMBV3_05967 GCACGTAGACCCCCCGTTCCACAAGAACAGGTGAGGTTGAAGGAGCCAACCAGCTGCTGG Variant GeneID:613626|MDP-1:NM_001164221:260_cdna 212^327 3 EMBV3_09294 GeneID:613626 10 GENE MDP-1 MGC133592 magnesium-dependent phosphatase 1 EMBV3_14341 ATTCCGATCCTTCATTGGCTGTCTCGGATGTGGACTTGGATCATTCTATAGGAACTCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17395 TGGTGAGGGGCGGCTGGCTGTGGAGACAGAATGTGCAGCCCCCAGAAGGCCGGAGCCGAG Variant GeneID:511885|PLEKHB1:NM_001113278:57_cdna 369^521 5 EMBV3_03772 GeneID:511885 15 GENE PLEKHB1 MGC128483 pleckstrin homology domain containing, family B (evectins) member 1 EMBV3_40670 CGTAGCTCTGGTGGTGGCCTTCTTTGTGCTGTGGTTCCCGTACAATCTCACCTTGTTCCT Gene GeneID:512583|CCBP2:NM_001015581:89_cdna Constitutive 0 NULL GeneID:512583 22 GENE CCBP2 NULL chemokine binding protein 2 EMBV3_11082 AGACTTCGTAGACCGGGGTTCCCAATCAAGACTAGTTTGGGTGCCTTGAAGATGGTATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10054 AGCTGGTGCGCAGGTACAAGAAGCTCAAGGTGGAGAAGGAGGAGTTCGTGACGCTCAAGG Gene GeneID:528437|ESRRB:XM_002691121:59_cdna Constitutive 0 NULL GeneID:528437 10 GENE ESRRB NULL estrogen-related receptor beta EMBV3_06483 CAGCCCAAAGACTAGGGGAGGCATTCATTACCTTGGCTTGACCTGGACATCCAGAGGGCA Gene GeneID:507466|ZC3H10:NM_001097993:962_cdna Constitutive 1 NULL GeneID:507466 5 GENE ZC3H10 NULL zinc finger CCCH-type containing 10 EMBV3_35577 GGCAAAATTGGCAGTTTCGTGGGGTTGTGATACCTGATGTGCCTCAGATTCTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_02570 TGTTCAGATAAATCTGAATGGAAGAGTGAGTGGTTAAAGTACCACAGAAGACACTCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28487 CATGCCAGCAGGCCTGATTGCAGGTGCCAGGTAACATCTCCAGGGATAGAATGTTAGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07393 CTGAGTCCAAACAGTCATTTCCACCTCCCCCTGACTCATTTAACTTGACTGTGCCACCAG Gene GeneID:617442|EVI2B:NM_001099166:295_cdna Constitutive 0 NULL GeneID:617442 19 GENE EVI2B MGC152610 ecotropic viral integration site 2B EMBV3_17197 GGCTTTACGGGTGCAAACACTGATGGTGTACTGGTATCCAAGACCCTAAACTCTCCAAAC Gene GeneID:508268|CLDN11:NM_001035055:10_cdna Constitutive 0 NULL GeneID:508268 1 GENE CLDN11 MGC128478 claudin 11 EMBV3_14396 GTATAAACTTACTCCTCCCAAAGTTCCAGCAGACCACCCCCAACCCGAGTACATCATCTG Gene BVT0102_036945 + 0 NULL GK000022.2:10588575-10648102 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125985 1 XLOC_077348 Coding TCONS_00125985 XLOC_077348 Coding Coding EPM2AIP1 22:10586152-10594030 o TSS94619 7878 1 TCONS_00125985_3 608 0.201447067783701 1 0 0.000265966230841173 8.86954386835163e-05 0.000231905754375279 0.000134923819226764 0.000203679597682264 7.44655362956965e-05 0.000145086723704281 0.000233495200403252 0.000396610767742085 0.0021256678578916 0.000669060108906668 0.000931667817773147 0.000248107607394233 0.00104254946470704 0.000679487354151299 0.00917602043704996 0.00527065737067199 0.00691450987556532 0.000214647269288099 0.000308542261446128 6.84347142262384e-05 0.00245283846448527 0.00250953719285213 0.00440501491884176 0.00038300983466935 0.000483828043141318 0.000288569500248106 0.000970515819378654 0.000622386227282304 0.00171102419861404 XM_005222591.1 EPM2AIP1 PREDICTED: Bos taurus EPM2A (laforin) interacting protein 1 (EPM2AIP1), mRNA. 0.0 1.402e+04 100.00 0.986925615638487 NM_014805.3 EPM2AIP1 Homo sapiens EPM2A (laforin) interacting protein 1 (EPM2AIP1), 0.0 3429 75.25 0.635694338664636 TCONS_00125985_3 sp|Q7L775|EPMIP_HUMAN EPMIP_HUMAN EPM2A-interacting protein 1; 0.0 1078 83.88 0.998355263157895 0 coding 0 0 0 0 -0.199012865962634 0.469157467162574 0.00339084481373278 0.953002678623339 AGAAAGATGTGCGCCTGCGCGCTTGCAATCGCGGCCTACTCTTTCTATTGGCTCCTGCCTGGGGCTAGGGAATACGAAATCTCCAGCCAATAGGAAAGGACGCGCGGGTGCCCCAGGTTGGTGTCCGCCGCTGGGGTGATCTGGCGCAGAGCGGAGGAGGCGCTTGGGGCCCCTCTCCTGCTCTTTCCTCCCCTTTGCTTGCGGCCTCCCAGAGGTCGGCCCATCTCCTGTGGCCTCCGTGAAATGTGGATGACGCCCAAGAGGAGCAAAATGGAAATCGACGAGTCTCGGGCGTTCCGGGCCGAGTGGACCCAGCGGTACCTGGTGGTGGAGCCTCCGGAGGGCGAGGGCGCCCTGTGTCTGGTCTGTCGCCGCCTGGTCGCAGCTACGGGCGAACTCGACGTCAAGCAGCACTACGAGGCCGAGCACGAGTACTACGAGCGGTATGTAACGGAGGACGAGCGCGCGGCGCTGGTGGAGCGTCTGCGTCGCGGCGACTTTCCGGAGGCCGCCCCGCTCACTCCGGAGCAGAGAATAGCCCGTGCAGGCCTGGGACTCGCCCGCCTCTTGGCCTTGAAGGGTTGCGGCTGGGGCGAGGGGGACTTTGTGCACCGGTGCATGGCGGTAATGCTGAGAGACGTGCTGCCCGATCACGTAGGCATTATGGATGGCATCGATTTATCTCCAGAGACCACGCGGCAGAGGGTCCTGGACATTCACCAGAATCTACGCAGTCAACTTTTTAACCGAGCCAAGGACTTTAAAGCCTATTCCCTTGCCTTGGACGACCAGGCTTTTGTGGCCTATGAGAACTACCTGCTGGTCTTTGTCCGCGGCGTCGGCCACGATTTGGAGGTGCACGAAGAGCTTCTGACCATAATCAACCTGACTCATCACTTCAGTGTTGGCGCCCTCATGGCGGCAATCCTTGAGGCCCTGCAGACGGCCGGGCTTAGCCTGCAGCGCATGGTTGGACTGACCACGACCCACACTCTGAGGATGATTGGTGAGAACTCAGGACTGGTGTCATACATGAGAGAAAAGGCTGTAAGCCCCAACTGTTGGAATGTGATCCACTATTCAGGATTTCTTCACTTGGAACTGTTGAGCTCCTACGATGTGGATGTTAATCAGATCATAAATGCCGTATCTGAATGGATAGTTTTGATTAAGACCAGAGGCGTGAGGCGGCCGGAATTTCAGGCTTTACTGACTGAATCTGAATCAGAGCACGGTGAAAGGGTTAACGGACGCTGTCTGAACAACTGGCTTCGGAAAGGGAAGACTTTGAAACTAATATTTTCTTTAAGAAAAGAGATAGAAACATTCTTGGTCTCGATAGGAGCCACGACGGTCCATTTCACAGACAAGGAATGGCTCTGTGACTTTGGCTTCCTGGTGGATATTATGGATCACCTTCGAGAAATCAGCGAACTATTGAGAGTGAGCAAAGTCTTCGCTGCCGCCGCCTTTGACCATATCTGTGCCTTTGAAGTGAAGCTGAATTTACTTCAGAGACAAGTCGAGGAAAAAAACCTGACACATTTTGCTTCCTTGAGCCAAGTGGTTGATGAGCTTAAAGAGAATCTTCAAGAAGACGAAAAAGTACTCGATCTTGAGAGGTATCGAGCGGTGATCTGTCGCCTACAGAAAGAGTTTGAGCGACATTTCAAGGACCTCAAGTTCATTAAGAAGGACTTAGAGCTTTTTGCTAATCCATTTAGCTTTAAACCTGAATATGCACCTATTTCAGTAAGGGTGGAACTCACAAAACTTCAGGCAAGTGCTAACCTTTGGGAGGAATACAGAACCAAAGATTTAGGGCAGTTCTATGCTGGTCTGCCTGCAGAATCTTACCCGATTATCAAAGGGGTTGCCTGTAAGGTGGCATCCTTGTTTGATAGCAGCAAAATCTGTGAAAAGGCTTTTTCATATTTGACTCGAAACCAACACACTTTGAGCCAGCCTTTGACAGACGAACACCTCCACGCCCTGTTTCGGATTGCCACCACTGAAATAGAGCCGCGCTGGGATGATCTTGTGAGAGGAAGAAATGAATCCCATCCATAAACTCTTGTAGTACAACATTGAAACACTCAACAAGAATCCAGTTCTAAAAGCAAACATCTGTTTGACTTTCAAGTGTGCTAATTTGGATTGTGGGAAGGCACCATGTTCTTCATCAAAATTGATCACAATTGATACGCTTTAGACAGATTTTTTTTTTTCATCTCAAGAGGCATGGGACTGACACCTGCAGACACCTTTTTTTTTTCTAAAACTGAATTTCATGGCAAAGTCATTATCTTTTGCTTTTTTGATAAAATTTTTTTTAAAGAAGTGTAGTACTAAAATGGGAGTTGAATCAGAAGTCTGTTTTTAAGGTGTCTTGAAGAAATTTTGCTCTTATTTTAACCAAAAATGTGTTACAATTCTGATGCGTATAGTCTGAAGGTATCAGCTTCTTAAATATATGTTTGAGCCAGTTTGCAGAAACTCACATAGCAACTGCAGAAGCTTCTGCAAAGGAGGAGCGTACATACAGTGGGGGTGTTTGTCTAATTATCAAAATGTTGGAGACTATTTTTTGTAGACATGTTTCTGAGTCTAAAGTAAATATATTTACTTACTTTAGACATATTTCCTCTCTCTCACCTTCCCCTGCCCCATGGTAGTGATAATGATATTACTTAGGAAATTTTACTCAAGTTGAGTAAAGTTTTAGTCAGAGGAGCAAGAATTGTTTTAAATTGCTAGTTTAGGAGGCTTTTACAGTTTGGAAATCAGACTAACCGATTTTTGGCAGTTTCCCGTGAATGCTTCGCAGTTGGGTGCCGTTTTTATGAGCTTGCCTGTTAGAAGACTATGGTAAGTATAGACTCTTAGGGGCTGCCCACTAGTCATTCTTTGTACTCGAGACAGTTTAGCCCTGTCGAAAAGGATGAGAAAGAGAAGATGTTTGCATCGCAGGATCGAGCTGTGAGCTATTTTAGCTTATTTGTCCCATCGGCCTGGGTGCTGCAGCTTTATAAAGAAATCCTGCTAAAAGGCAATCCTTTATTTTAACGTGATGTATCGAATGTTGTTTGTGACTTTAAGTGGATTTATTATTAACTTGCCATTGTCTCACACATTGTGTATTTAAGACTGCACAAGGGGAAATATTTTAACTCTCCAGAAGCAGCTTTATTTACTGATTGTAGCAGTTCCATATATTTTAGTGAGGCACCTGCTTTGGACTAAAACAGTAATTTTCAAATTTATGTCAACCATTAAAAAATCTTATAGTAAAGCCAAATATGTGAAATGATTTAAGGACAGGACCCAACTTAGAGATCCGCTCAAGTACCATTTGAAAACTTGTGCTCAAGTCCTGTCTTAACTCTTGGACTGCATTTCTCTATGGTCACTAATTCAGCAAATTCAAGGAACCAGAATAAACAAGAATTTAGAAGGAATTGAAGCCTGAGCAATCAAAATAGAACCAAAATCTTGACAGTGGTTCTCAATCAGACAGTATCCCCTCCTTTAGAATGTAGGGAAACAAAGGAGACTGTTTTTAATTGTGACATTCATTAGGAGGAAGTTCTGCTGGCATGTGAGCATGAATGACACCCTCCCCTTGTGCATAGGATAGCACAGCACAGTATAAACTTACTCCTCCCAAAGTTCCAGCAGACCACCCCCAACCCGAGTACATCATCTGATTTTGAGGGAGAAGGCAAATTACCGGTAGAAGCAGAATTAGAAGGACAAGTTAGGCTAATTGATAACATTTGATGGCGGAAACTAATTCCAGCATTCCAGATTTGGCTGGTAAGATACAGTCAAGGCCCCGATAGGTTCTAGTAGCTCACAACAGCATTTATAAATCAGTAGTTGGCACTGAGCCAGATTAAAGGGCTCTGGTTTATTCCACACAATTAGTTTAGGGCAGAAAAGAAAGTGTTCTATATTACTAAGATACTTAGCGAGAATGGTCAAGTTAAGATTTGGGTTAACAGGGAGTAAGCTTAAACGTCTGGAGAAACAGCAGATTAAAAAAAACAAAAAAAGAACAAAAACATCTGCCGGTAATTTTCCAGCAGTTTGGAGTATTCACTTGGCAGGTGCCTTATGGAAAGGATAATTGGAAGACCTGGAAGCTGATTCTGCTTTCTAACTCCAGTTTCTCAAATGCTGAAGTTTTGTATATTTTGTGAATTTCCATTATATGTTTTCCTTAGGGTGATCATAAAATTAGTTCTGTAGTCACTGACTGGGGGAGATATAAGCCCAGAATTTTAAATTAACCCTGAACAATAGAGAATTTGCTATGTAAATTAGCCTTGTTTGTTAAAAAAAAAAAGTGTGTATTTTACTGTTTTCTGTACTAAGTAATTCTGTAACTGCATGGCAGTCTTTACAAGTTACTTTTTATAATATAGCTGTTACTGGTCCTGTCATATCCGTGAATATGGTTAAAGTAAGTACTATTTTTTTTAAAAACTTTTGTGTCCCAGTATCTCCCATTCCTACTAGTTTTCTTCAAAGATTTGTCTGTATTCCCGCTGTCCCATATTGTGCTCTGATCACTCTACCAAGTTTCCCAAGTCCTTGTCAATATGCCAAGCCTCTTCCTACCACTGACCGCCCTCCTCGAAATGCTTGCTTAGTTTGGCTCTGGGGAGAGACCACCTCCAAGAACTCGTTCTCCATCTTCTTTGCAGGCACCTCTTTCTCTTAAACATCTGTGTCCTTGGGAATTTTTAATTTGGTTTTAAGCTATCTTGTTTACATCATCTCCTTAGCTGATCTTTTTTTTTTCTTTCATCCCTTCAGTTGCCAACTGTATGCAAATGACTCCAACTTAATGTCTCCTTTCTTGACCGTCCCTGATTCCCGTATCTAATTGCTAACTCAAGTCCACTTTGCTGTCTCATAGGCATCACACATGTCCTTGACCTTGTCCCCCCAAACTGCTCCTCCTCTACTGGTCCCTCTATCTGTAAATGGCACCACCACTGCCAACCATCCAGTTGGCACAGCCCGAGCCCCAGACTCAGGTCTCCATGACCTTTCCCTCTTCATCCATCACATCCACTCACACAAACCTTTCTGTGAAGTCTGTTGCCTAAACATTCCTCAGTTCTCCAGTGTACTCTCCTGGTTGAGGCCATCAGCCTACCTAAAGTACAGCAGTGGCCTCCTCCGTCTCCCCTTGTCTGGTTGTCATCCCTTGTCACGCTGCAGCCAGATTGCTCCGAAGTCTGGTCAGTCACTCCTCTGCTTCACCCACTGCTCTTAGGAAAAGGTGCAGTTCATACGCCACCTCTCCAGGAAGCCTTCATCCATTCCCTCTAGACCAAGTGCCCCTACGATGCATCTGTAAATACCCTGTTTCTCCCCAGCCACACACACAGCACACTTCATTGATCCTTCTTGTTGATCCTTGCTACACTGTGAGCTTTGCAAGCCTGGGGACCATGTATATGCCTGCTCACTGTTCATCTAATGCTTAGCGCAGTGCCTAGCTTTTCAGTAAATATTTGGATGAGTAAATATTTGTTGTTCTACTCTTCGCAGCCCTTTCGTAGTCTTTGACCTTCTCTAGTTCTGCGATGACCTGCTTGCTGGGTAACTTATCCACCAATTGCCAAGTAAGAAATGAAACTAAGTTCTTTGTGACTAGGGAATTGTATTTCTAGAATTGAGTTCAGTGCTTGGCATGTGGCTCAAATATTTACTGTGTGAATGTTGTTGAGGAGACACTGTAATTGGCCCTTGTAAACATGAAGTAGTAACATGAAGTATATTCATATATCCACCATGTAGTACTGTCTTTACCTCCTTGATAATAGAAGTCTTCGTTTTTTCTTTCTTTCTAATTGCTAAAGGCAGGCTTACAAAGGAACCTGGATGAGAAAGATTGGACAACTATGTAGTGGACTAAAACAATACTTCAGTTGCATTCGGTACCAGAAAAAGATAATACCTGCTTAAGAGTTAATATCTGTTTTCCTTCTGTAAGCATCAACTCTGGGAGAAAACCACCTGCTCTTTTCCTTTACAGATGGTTTCTGGCTCTTCTGGGATTTTAAAGTAAGTAAATTTCACAAAATACTAGAAGAAGGACCCAGTCAGCCCTTACGATCACTAAATACTCCGTTCACATGCTTTCCTACTTGCAGAATGTCCTCATCACTCATCACCTCCCTGAGGAGGGTAACCCGGAAGTGCTGTGCGCTCCGTGTGTGCTGCTTGGATTTGCTCTGCTCCTTCGCTTTCTTGGTCTCATGCCTCTCTGAACTTACTTTCTGGGTCACCTGGCCTTCCAGGTGTTGCGAAAGAGCCATACCCTTCGTCTCTTTTGTCCCTGAGCCATTTTTTCCAGCTTAAGGGATTAACTGGTGTTACACTCTTAACTGGACTTTTAGACTGAGGCCCATTAACTAATTCAGAGATTTTAACAGTAAGTGTGATTGTCATCCAGTGATTTGATCCTTGCTGTAAAACTGGGTTTTACTCAACCTTTGACATAAAGGATTTCTCATTTTTATCTCTCTCTGTAATTGAGACGTCGCCTCTTCCTACCCAATAAGTACTTGAGTTTGTGAACTCTCTTTATCCCCTTGTATTTCTGCTTGCAAACTGATGAACTCTTTTCTGAGTTCATCTCTTTCCTGTCTGTTTTGTCAAATGGGACCAACAGCTACCATAAAATATTTTGTTTCCTTGTCTTAAAGAGAGATTCTCTGCCTTCCAGATTCTCTCCAGGGAATTCTTCCATTCCATAACAGGCATTACCCTGTAGAAATTACTTCTTCTGTTCTCCAGCAGCAATTTCCAGAATGCCTGCCAACTAAGTCAGTGTTCAGTACTCTAGATTTTTTGAAAACAGAACCTATTTCTGTATCAATGGGCTAGGTTGCTGTGCGGTAACAACCATGATTCCCAGCTGTTCTCTGGTGGTCTGGCGAGGGCCTGTGCTCTTAAGTCAGGGGTTGAAGGCCGTGGGTGAGGTGTGTCATATGGCCTGTTTGTCTAAATAAAATTTCCTTGGGAGACAGCCTTGCCCATTTGTTTCTGCCTTATCTATGACTGCTTTTCCTCTACCCTGGCAGAGTTGTGGAGTTACAGAAAAAAGTGTCCAGCCCACAAAACATAAAGTGTTCACTATGTGAGCCTTCAGAGAGTGTTCACTGATCCATGCTCTAAATGGTCCTCATTCTGGGGCTCGAGCTGACCAAGCGGATATCACCTAGGGTGTGGCTGCTCATTTAGGGAAATGAAAAAGTAGGACAAGTCACTTACAGGCCCTTTAAGCACTCTCACTGGCCAGGGCAGATCCCATGGCCACCCCAAGCCCAGGGAGTGTGATCCTTCCGCGTGCCTTGGAAGAGAAGCAGAGATATTTGGAAGACGATACTACCAACTAACACATAGCTGTATTTCTCTCTCTCTACAAAATTTCTTTGAAAGTATTTTTTCTTTTTAATTGCGGTGAAATTTACCTTCAGTAAAATGCAAAGACTTAGTGCACACCTTGTAGATTTTTATGTGCACCCTAGAACCCATCAACCAAATCAAGACACTGAACGCTTCCAGCACCCTGGTCACTGCCCGCCTATGCACACCCGCAGCCTGCCACAGATAACCACTGTTCTGACCGTTATCACCAGAGATATGTTTGTTTTAAAGCTTCATGTAAATAATTCTGTGTACTCTTGCTCAGCATTGTATCTGTGAGTTATCCATGTTGTGATTCATTTATTAATACCTCTCTGTAGTGTTCTGTCATGTGACTTAGACCACAGTTTATGAATCCATTCTACTGTTGGTGGAAATTTGGGTTGTGTCCAGTTTGTAGTTGTTATGAATAAAGTTCCTACGAACATT TCONS_00125986 s 5' 0 TCONS_00125986 s 5' 0 EMBV3_12546 GTTAGGTTTTTGTCCGCCAGGTGCCTTGTAGGATAACCGTGCTAAATGTTTCAGGGGTGG Gene GeneID:533151|ABCC3:XM_002695886:203_cdna Constitutive 0 NULL GeneID:533151 19 GENE ABCC3 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 3 EMBV3_13401 GCAATACCCTAAGCCAACATTCTTGTGGCGTGTTAAATCCGTGCTGCCAGAACTACAGCC Gene GeneID:526956|ACAD11:NM_001075893:34_cdna Constitutive 0 NULL GeneID:526956 1 GENE ACAD11 MGC140526 acyl-Coenzyme A dehydrogenase family, member 11 EMBV3_09861 GGTGCTTAATCCGTTCACTGTTCCTCGGTTGATCTCAGAGCTTCCTATTCCATGTTGGGG Gene GeneID:510037|RNF122:NM_001101920:27_cdna Constitutive 1 NULL GeneID:510037 27 GENE RNF122 MGC166001 ring finger protein 122 EMBV3_16560 TTTCAGTAAAGTGTTTTCTGTAATCTTTTTTTAAAATGAGAACTAATTATTGTCCATAAC Gene GeneID:506501|TERF2:XM_002694838:745_cdna Constitutive 1 NULL GeneID:506501 18 GENE TERF2 NULL telomeric repeat binding factor 2 EMBV3_06427 TCAGTGAATTTGGGAACTGTAACTTAGAGAAATATCTTCCATCTGAATATAGTATATACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24660 AGCGCAGTGACCTACCTGGCAGCCGCCAAGGCGGTGGCGGTCCCCAGCCCGAGGATGCCA Variant GeneID:511713|MAGIX:XM_002700102:233_cdna 164^238 1 EMBV3_25282 GeneID:511713 X GENE MAGIX NULL MAGI family member, X-linked EMBV3_39472 AAGTGTTTTCCTGAACACTGATGGAAATGTATAGAATAATATTTAGGCAATAACGTCTGC Gene GeneID:534872|MARK3:XM_002696784:492_cdna Constitutive 0 NULL GeneID:534872 21 GENE MARK3 NULL MAP/microtubule affinity-regulating kinase 3 EMBV3_37963 TCTGTGAAAGATGCCTCCAGAACTACATCCCTGCAGGAGCGCAAGGCAGAGGCCCTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11904 TCGCTTTCCCAGCACCATCAGCATTCTCAAGGAATTTCACTCTTATGGGCTTTGGGGCCG Gene GeneID:786529|LOC786529:XM_002699875:97_cdna Constitutive 0 NULL GeneID:786529 X GENE LOC786529 NULL similar to mitochondrial carrier triple repeat 6 EMBV3_27396 GTCCAGTGGAATCTTTCATAGCCTTCCTCCTCATTGAACTGGCCTGTGGACTGTACTTTC Gene GeneID:507921|MFSD5:NM_001075340:27_cdna Constitutive 0 NULL GeneID:507921 5 GENE MFSD5 MGC143224 major facilitator superfamily domain containing 5 EMBV3_15947 TGGAAGGAGGAAAGACCAAATGCCTTGGAAAAAGCAAAGGTCGAAAGTATCCCCCCATGG Gene GeneID:529260|NDST4:XM_002688071:92_cdna Constitutive 0 NULL GeneID:529260 6 GENE NDST4 NULL N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 EMBV3_07906 TGAATAGAGAGCAGGAGTGTGGTAGTACATTCATGAAAGTCTCAGAAAATCTGAAGTCCG Gene GeneID:513193|PLSCR1:NM_001034436:32_cdna UTR3_Alt 2 NULL GeneID:513193 1 GENE PLSCR1 MGC128844 PLSCR2 phospholipid scramblase 1 EMBV3_40923 CATTGGTTATTTCCCCGATGTCGGCGGCAGCTATTTCCTCTCGCGCATTCCCGGTGAACT Gene GeneID:100298124|LOC100298124:XM_002683926:2_cdna Constitutive 0 NULL GeneID:100298124 Un GENE LOC100298124 NULL similar to CG6543 EMBV3_14387 CCTAACTGGATGTTTCTGGTTTGGCCATTTACATGAGAGTGGTGTGTCTGTTCTCTCCAT Gene BVT0102_120908 - 0 NULL GK000002.2:79852403-79894231 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102701 TCONS_00102702 TCONS_00102706 TCONS_00102711 TCONS_00102705 TCONS_00102704 1 XLOC_061933 Coding TCONS_00102711 XLOC_061933 Coding Coding GLS 2:79835629-79854632 j TSS76426 3475 1 TCONS_00102711_1 240 9 0.817598147563414 2.72588454724876e-11 0.000342939772984902 0.000697007028172933 2.10805429482931e-08 5.68861364490891e-35 0.000151869459526694 0.000286232190972494 0.000237719876002258 0.000736060446022964 7.39456780092949e-05 6.22586468027957e-05 5.97423955499651e-07 8.81205794198707e-05 1.95883532646726e-51 0.00013860700538999 0.00192152573910638 0.000675935777661504 0.000610616241886635 0.000590718272286096 0.000416789203195186 6.33046714987541e-36 0.00103279516920006 0.00086258373682339 0.00237328924708072 9.88324206489663e-07 0.00069343533847548 9.02475393854857e-06 0.00010769661376997 7.74195643754172e-05 0.000115254936405469 NM_001077964.2 GLS Bos taurus glutaminase (GLS), mRNA. 0.0 2199 99.92 0.35136690647482 NM_001256310.1 GLS Homo sapiens glutaminase (GLS), transcript variant 2, mRNA. 0.0 2904 80.21 0.907338129496403 TCONS_00102711_1 sp|O94925|GLSK_HUMAN GLSK_HUMAN Glutaminase kidney isoform, mitochondrial; 2e-139 411 100.00 0.795833333333333 1 coding 0 0 0 0 0.112333900664498 0.413689800229252 -0.00440848866206536 0.929980249136809 GACAACTGCAACAGTTCAATGAACAAGGAGTGAATAATGCTGAAAAATTTGACTATGTAATGCAGTTTTTAAATAAGATGGCTGGTAATGAATATGTTGGATTCAGTAATGCAACGTTTCAGTCTGAAAGAGAAAGTGGAGATCGAAATTTTGCAATAGGATATTACTTAAAGGAAAAAAAGTGTTTCCCAGAAGGCACAGACATGGTTGGTATATTGGACTTCTATTTCCAGCTGTGCTCCATCGAAGTAACTTGTGAGTCAGCTAGTGTGATGGCAGCAACACTGGCTAATGGTGGCTTCTGCCCAATCACTGGTGAAAGAGTACTGAGTCCTGAAGCAGTTCGAAATACACTCAGTTTGATGCATTCCTGTGGCATGTATGATTTCTCAGGGCAGTTTGCTTTCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCTGGAGGCATTCTTTTAGTTGTCCCCAATGTCATGGGCATGATGTGCTGGTCTCCTCCTCTGGACAAGATGGGCAACAGTGTTAAGGGAATTCACTTCTGTCATGATCTTGTTTCTCTGTGTAATTTCCATAACTATGATAATTTGAGACACTTTGCTAAAAAACTTGATCCTCGAAGAGAAGGTGGTGATCAGAGGCATTCCTTTGGACCATTGGACTATGAAAGTCTCCAACAAGAACTTGCTTTAAAAGAGACAGTATGGAAAAAAGTGTCACCTGAGTCAAATGAGGACATCTCTACAACTGTAGTATATAGAATGGAAAGTCTGGGAGAGAAAAGCTAAAGAAATGGGTTCTAGTTTCAGAATGTTCTTCATTTAACCTTTGAAACATCTTTAGTTTTTTTTGCATACTATATTTATTGAGTTTTTTGTGCTTTCAACCTTGGGTGCTGGAGCCATAAAGCTTTTTTTTTTTTTTAAGTCTTTGTGTAAAGTTAATAGATTAAAAAGTGGATTTGTCAGTCTTTTAAAAAGTATAAATAAAGCAGATTTACTTTTTTTTTTAATGAAAAATTTCTTTAAATTTTTTCTTGGTGTAATTAAAATTTTAACTATATGTAGTCAAATAATCCCATTTTAAAATAATAACAGAAATTTGTAATTTCTTGATTCTGAAACCCACACATTGAACTCATAAATTTCATCACATTTTTTTATTTTCCAGTTTTAAAATTGACATGGTGTCTCCAGTAGCAATATGAAGTATTTCTGTGCTAAATACAAAAATAAAAAGCCATAATTATGATTTCCAAATTATTTAATATAGCAGCAGATAGATTTGCTTTACTTTTTTTTTGGCTTTAAATTTTTTAAAATTTATTTAAAATTTTATCAAACACTTTAAAATATCTTTGCTTTTTCACTTTCAACTCCTTTGTTCTGTCAGAATTGTTATGTACAGGAGTGTCTTATGTTACTAAAGCATTCCAGCCAAAGAATTTCTGATGTAAGATAATGACATGTTTCACTGTTAAAAACCTATAATGGTTACTCAGAAGGAGCAGCAGTGACTGCCTTCCAAGTGAAATGTTTACCTGAACAGTTTTATTTTCATATTACCCACGTAACTTTTTCTGTGTTATATTTAAGTGTGAATGGTGAATTTTGGTTTTTAGCTTTTAATAATTATAATAATTTCACAAATGCTAATGAACTTTGCAATAAATTATAATTACATCTCATAAAGCTTGTTTTATTTGAAAGTAGTTAGGAAATGAATTCAGTATGAAGATAGTAAGTATGCTACTAAAATGCCTGTTAGATTTTAATCCTTTTGTTCAGTTATAATAATGCAATATTGAGAATCAAAACTTGTTTTTAAGAGGACTATAGGTTCAACACAGCCTAAATTTGAGATAATTCACAATGTTTAAAGTCTGTCTTGACAAAGTAATTGTAAAGTTTTGTAGGATCCTATTCATACTTCTTCCTTCCTCCATATACCTCTCTGTTTCTCCCCACAGTTCCCAAGAGCTTCAAGATTTTGGAGGGACAGGGATGGAGTCAGAAGGAGAACTTGATAGTTTCTTAGTGTCATGGCATACATGGTGGTGTAGGGTAAAGTCTAAAATAGTAATTACAGTGTAGCAAAAAAGTATTTTCCTAGATGGTTTAGATGCAAGTGCAAACACAGATGTAGAAAGTCTTGATTATATGAGTTTGGGAACTATGATATTAGGAAAAGAAGTTCTCTTCCAAACTTGTTTAAAAGCCTTTTGGCTCAACTGAAGTATTAAACATATTTAAAAAATAGTTATCCAGTAAGTTTTAGAGGATATTAGCCAAGGATTTTATGGCTAATTGTTCCTCTGATGTGCAGATGCATATCCTAACTGGATGTTTCTGGTTTGGCCATTTACATGAGAGTGGTGTGTCTGTTCTCTCCATACATTTATACCTTAACTCTGCTATACCTTTGAACAGTGATTCGTATTAATTCACAGAGCTATTTGTGGTTTGGGGACTGAATGTCTTTAATTGGTAGTTTCCCAAAAAAAGGCTCCCCTCTCCCACGCTCTAATTGTTATATTTTACTGTTTCATTTGGAGGTGGGTTTTACTTTATAAAATGAAAATTTCATGTTTCATATTGTATCCACGTTTGTACAGATTTCAAAATGATGTTAATTTGTGTCATTTACTATGTTGATAAGGCTTAAATACACACCAGTGGAGAAGGGTTTTCTAAGCTACTCATCCTGTTAAAGATGAGCATCCAGAAGTTTTTGTAGGAAGGTACAAATGGAAGAAGAAAGATACTGTGAATAGGTCCTCAAACTTTACTTTAAAAAAAAAAAAAGAGGAAAATCTTTGCCAGATTTAAAAACATTATTTTGATTCTTTCAGTATTTTAAATACCTTTTCAAATAAAGTTATTGAAAAGTACCCAGTATTGTTGAATTTAATGTTTTATGCCATTACTGATTCTTGATATTCAAGCATTTTGAAGTTAGCATATTTGTTTTTCTTTTTTTTTCCATCATTAACATTTCATTTGAAATGCATATCCTTTCTGAAATATTTTATTTTTAGCATAAATGTTGTGCATTTTATCTTAGTGTTTGGATTAATCCATTTGTGTTATTTAGCTTTCTTTTATTTGCTTTGTATATTAATGTACCTTTTATTTTCCAGTATGCCTACTTTTTGTATTGTACAATAAATTTATTTTAAGCTGATTTTATTGGTTTTTTTTTATAAAAGCAACTCCAGCATTTTAAGTATAACAAATGGAATTTTAACTTTAAAAGTCATGCTTTATGAAGATATAATTAAAATGCTTTATAATTTTAGTTAATTCTGAGACTTCTGTGAAGAGAAACTATAGAAATACTCAAAGGCTTCATTTGATTCTCTTTTTTTTTTAATGTAGTATAGTGTTGGTGGGTTTTTTCTTACTTTCGGGGAGGATGTTTTTCAATTGGTTGTATTAGAAGTATTGAATAAAGACTTTTTTCCTAATTTTTTTTTTTTTGT EMBV3_26067 ACCTGGGAGAAGCCTTGAGGCGGGGAGTCATAGACTTAGATGTCTTCCTAAAGCATGTAC Gene GeneID:507659|TSG101:NM_001097995:16_cdna Constitutive 0 NULL GeneID:507659 29 GENE TSG101 NULL tumor susceptibility gene 101 EMBV3_41295 GTTATGTAGTAGAGTGAAGAAAATTGATGAGCTGGACATTGGGCTCTAGTCATGATCTGC Gene BVV0102_010039 - 1 EMBV3_02872 GK000026.2:2900883-3504200 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11503 GTGGAGCTTTCGGCCGAGAACGAGAAGCTGCAGCTGCCGCGTGGACCCTAAGTTACTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36628 ATCTAAACCCACACACCAGCCTCCTCAGACAAAGTGGTACACGCCAATTAAGGGTCGGCT Gene GeneID:510080|ANTXR2:NM_001076826:35_cdna UTR3_Alt 2 NULL GeneID:510080 6 GENE ANTXR2 MGC143297 anthrax toxin receptor 2 EMBV3_06657 AGTCAGCTCCTGAAGCCGTCTGAATGCTGAGCTCAGGGGGCCCGAGGTCCTGGAGCAGGA Gene BVV0102_193265 + 0 NULL GK000004.2:99719105-99724860 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182523 TCONS_00182522 1 XLOC_110883 NonCoding TCONS_00182523 XLOC_110883 NonCoding NonCoding - 4:99722796-99724570 - TSS136372 1340 1 TCONS_00182523_1 90 0.109701492537313 2 0.245346869712352 4.7742433533287e-08 5.61462281757404e-05 2.63531993111542e-13 0.000481422125232657 0.000106202252166542 1.86101919328696e-24 7.94258899424084e-28 1.07673690211084e-24 4.83075542954018e-33 4.35327555748863e-09 0 0 0 0 0 1.23809266506359e-08 0 1.961835996391e-08 1.73330420143787e-14 1.49700142542609e-05 5.38490358833338e-09 0 0 0 7.80604511202273e-05 3.08688099253139e-14 1.04166543850422e-60 0 0 0 NM_001101159.1 TGDS Bos taurus TDP-glucose 4,6-dehydratase (TGDS), mRNA. 2e-48 197 89.33 0.111194029850746 NM_014149.3 WDR91 Homo sapiens WD repeat domain 91 (WDR91), mRNA. 2e-56 224 73.06 0.294776119402985 0 noncoding ATGGGTGGGAGTCAGCTCCTGAAGCCGTCTGAATGCTGAGCTCAGGGGGCCCGAGGTCTTGGAGCAGGAGCAGGCAAGCGCAGGCAGCTTCAAAGTGATGTGGAACCCCCTGCCCCATCCCTCCTGGTGGAGCCTTGGTCACATCAGCTGTGAACAGAGCTCAAAACAAGAGGGAGATGGAGCATAAAGGAAATGAAAGAAGGGATAGCTTTTCAAGTGCTGTTTTTCTACAAACCTTAAAGACATTTTGGCAAGCTGTGGAGACCACATGTATGGAGAAAATGCCCACATGCCCTCAATGGGCATTAAGACAGAAACTTCAAGATGGAGAGAGGAAAAGTTTAAACCATGAATTCTCTCATGCAAATGAAACTCATGACCACTTTTTAAATGTCCCACAGAATCCCTGGGGGAGAGAAATAAGGTTGCTGCTTCAATGCAGAAGATAGGGAAAATTATAGGTGGAAAAGTCTTGGGTTTATTCATTTGAAGGAGGATTACCAGGTGGAAATGGGTAAAAATGTTTAGTAACTACTTATCGCTAAGTCTCTCATGTTTTCTCATAATTGAGCCTCCCTGCTTTCCTCCCAACTGCCAGCAGATCAGAGCCAAAGTCTTAATACCCATCTTTTCACGATTTTCCAAAAGGAGGTAACTGGGAGCACCCCCTCACCAGGCCTGCACCCCAGATCTGGGTTGAAGCCCAAAGAGCCTCTGCAACAACTGTTCTGAGCAGAGCCTGATGACAAGGCTGCCCTGTCAAGTGTCGGAGCCTGAGGTCCAGGCCTGAAACCCCAGCGCTTCAGGTGGAAATACAAGCGGGAGAAGGCAGTCATCCTCTTGTGCTTCTCCACCCTGTGAGGGTATCTGCCCTTTCAAAGTCCCACCCAGCCAGGAAGCAGAGGGCCAGGCTGTGGACACCAAGAAGGCGAGAACCCTAGGTTCCCAGCCTTGGCCAACTTGCTCCTGTCCTCTGCCCACTCACCAGCAGAGGGCGCCAGTGGCTGGCTCTGCTCAAACTCAAGCATGGAAAGTTGACAGAACAGGAGGAGCCCCCTTGACAGGTCCCGGGAAACCATGGCCACTCGGATGGAAGGGGCAGACACCTCAGATCCTGCCCTTGTGCTGAGAAGCTTCTGGAACAAAAGCTGCCAACTCTCAGGGAAAAGAAGAGACACTATAGCCTCCTTGAAAGTGAAAGTCACTCAGTTGTGTCTGACTCTTTGAGACCCTGTGGTCTATACAGTCCATGTAATTCTCTAGGTCAGAATACTGGAGTGGGTAGCCTTTCCCTTCCCCAGGGGGTCTTTCCAACCCAGGGATCGAACCCAGGTCTCCCG TCONS_00185008 r 5' 0 TCONS_00185007 TCONS_00185008 r 3' 410 EMBV3_25342 GGTGGGTGATCTTCCCCTACAGCTTTTTCTCACTTATTTTGTCTTTAGATGGCGCTGATC Gene GeneID:768255|LOC768255:NM_001078121:745_cdna Constitutive 0 NULL GeneID:768255 4 GENE LOC768255 MGC127333 hypothetical protein LOC768255 EMBV3_40153 GGACACTGTGACCTAGTTGGAAAATTTAACCAGGGAGAGAACACAGCTCAGAGACTCTGG Gene GeneID:506005|LOC506005:XM_002689601:2_cdna Constitutive 3 NULL GeneID:506005 8 GENE LOC506005 NULL similar to KIAA1432 EMBV3_14404 TGTCATCCCAACAGGTGAGCATAAACGAAGTGATGTATTTCTGTCACCCCTCTGTCCCGG Gene BVT0101_006313 + 0 NULL GK000004.2:64205034-64209774 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184269 TCONS_00184267 TCONS_00184260 TCONS_00184265 TCONS_00184266 TCONS_00184263 TCONS_00184268 TCONS_00184262 TCONS_00184261 TCONS_00184264 1 XLOC_111306 Coding TCONS_00184266 XLOC_111306 Coding Coding FKBP9 4:64208583-64217102 j TSS137252 2101 1 TCONS_00184266_2 142 4 0.753815449636065 6.03911076810531e-05 0.00181776901134371 0.00112833045518676 0.00451945896760355 6.39503699962003e-05 0.00153154688803713 0.00183264459230433 0.00596360174551673 0.00392667308078388 0.000787145714881775 9.56116432632403e-08 0.000423642941047766 0.000967030696165045 0.00498215446821307 0.00186851773522965 0.0328067451318509 0.00800218059895938 0.0142131088312701 0.0031106730932969 0.000642797310121811 0.00215853362424812 0.00359313898634091 0.00334780633156899 0.00607374472629143 0.00571232019572036 0.00577669651714496 0.00222943822284853 0.000387395070234982 0.000113581290537986 0.00104175016849699 NM_001046372.2 FKBP9 Bos taurus FK506 binding protein 9, 63 kDa (FKBP9), mRNA. 0.0 1582 99.89 0.418372203712518 NM_007270.4 FKBP9 Homo sapiens FK506 binding protein 9, 63 kDa (FKBP9), transcript 0.0 922 79.77 0.488338886244645 TCONS_00184266_2 sp|Q2KJC8|FKBP9_BOVIN FKBP9_BOVIN Peptidyl-prolyl cis-trans isomerase FKBP9; 3e-94 287 100.00 0.992957746478873 6 coding 1 0 1 0 -0.245950272219386 0.16043368354327 -0.064492122063768 0.22778733230907 AAGCCCACGTGGGCTCTATTAACAGCTTGGCAGGTGGAATTTAGGCAAAACGTATAACATCGTTTTAGGATTTGGACAGGTCGTGTTGGGAATGGATATGGGTCTCAGAGAGATGTGCGTTGGAGAGAAGCGGACTGTGATCATTCCGCCCCACCTGGGCTACGGCGAGGCTGGCGTGGATGGAGAAGTGCCCGGCAGTGCCGTGCTGGTGTTTGACATCGAGCTGCTGGAGCTCGTGGCTGGCCTGCCAGAGGGGTACATGTTCGTATGGAACGGTGAGGTGTCAGCCAACCTCTTTGAAGAGATCGACAAGGATGGTGATGGAGAAGTCCTCCTGGAAGAGTTCTCAGAGTACATTCATGCCCAGGTGGCATCTGGAAAAGGGAAACTCGCTCCTGGATTCGATGCTGAGATGATCGTGAAGAATATGTTCACCAACCAGGACCGAAATGGAGATGGGAAGGTCACGGCTGAGGAATTTAAACTCAAAGACCAGGAGACAAAACACGATGAACTCTAAACCTGCCATGAGCCACTCGCGTGATACCAAGCCCCTGTTGTGGCAGAATGTGCACTGAGGGTGCGCGGGTCTCTCAGAAGGGGATGGTCAGCAAGTAGTCGACGGATCACATAGCTCCTGGGACATACATCGGGGTGGGTTGATATTCATGGTGAGAATTTTAGGCTGATGCCAGTGACACTACATAAAATCAGTGCGGGGGCCTTCGCATGGGTGGTGTAGAATAGTCAAAGTGCTGCATTGTCAGCTATTGTTTTGTGAGCCTTCTGGGTGGGTGGTTTTGTTATTAAAGGAAAACAGCATCATACAGAAGTTGCAATCATCTTGGAGGGAACAGAGGAAAATGTGTCTGGGATATCTACATAAAGAGGATTAAAAATGTTAACTTGCTGGTGTTTTCAAAGTGTTCTCCAGGTGGCTAGAAAAGAGAGGGCAGGTCCCAGCAGCATTCCCAGACAGCCCCAGGAAACTTCTTAGCAGCCTATACAAGACCTGGTAATGCCCAGTCTCCACCACGCCTACACACACACACACACACCTGGTAAATCCCAGTCTCCACCACGCCTACACACACACACACACACCTGGTAAACCCCAGTCTCCAACACGCCTAAACACACACACACACACACTTGGTAATTCCCAGTCTCCACCACGCCTAAACACACACACACACACCTGGTAATTCCCAGTCTCCACGATGCCTACACACACACACAGCTGGTAATGCCCTGTCTCCACCATGCCTACACACACACACACACACACACACACACACACACACCTGGTAATGCCCAGTCTCCACCATGCCTACACACACACACACACACACACACACACCTGGTAATGCCCTGTCTCCACCATGCCTACACATACACACACACACACACACACACCCCTGGTAATGCCCGTCTCCACCATGCCTACACACACACAATCACACACACACACACACACTTTTCTGGTTAATCACATCCCACCTTGTTGTCCTTCTATTGGCCAGGTAACTTGGAGGTTACAAAGAAAATCAGTGGACCAGACATAAGGCATGTTGTACCATGAGCAGAGAAATTGATTCTGCATTTGTCACGTAAGATTGTCTGCTTTACTCTTTCTTATTCTCATCACTCTATCCCATAGCACCCTCTCTTCCCGCCCTGAATCCTTCGATCAGATAGATACAAGTAGGGCTGATGGCTCAGCCACACTCGAGTTATCTCACTGTAGCCAAGACAGAAATGTCATCCCAACAGGTGAGCATAAACGAAGTGATGTATTTCTGTCACCCCTCTGTCCCGGAGAAGGAAGTGCCCTAAGGCCTGGGGCCTCTCTGTGTAGGACACTGTGCCTGCTGACCTGTCATGTTATGCAGTAACCACCTTGCTGCCTATGTCCCCTCATGGTGGTGGCACTCACCCTGAAGTAACCAATGATTTTCCTTTTGAAGCGACTTTGTTTGACTAATTTAAACTATTTTGTACTGATGTAGCCCTGAGATAGTTCCTGAAAATGCTGTGCACTCATTCAGTGGAACAAATGTTGGAAAATGAATTTTTCATATATAAAATATTGAATTATCAG EMBV3_27239 GAGCAACAAGTAGGAGGAAGAGCACAGTACCAGCACAGCGATATAGAAGGAATGGTTCCC Gene BVT0102_035191 + 0 NULL GK000016.2:44004669-44011277 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43465 ACATCTGGTGTCACAACCTGCCTTCCACATCCTTCCAACCTCTGCTTCCACAGCCAACTT Gene BVT0102_033154 + 0 NULL GK000023.2:15706221-15707548 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134213 TCONS_00134216 TCONS_00132485 TCONS_00134214 TCONS_00134212 TCONS_00134215 2 XLOC_081339 XLOC_080792 Coding TCONS_00132485 XLOC_080792 Coding Coding BYSL 23:15696924-15707357 = TSS99109 3050 1 TCONS_00132485_4 435 0.224590163934426 7 0.708301380368098 0.00241419199892556 0.00177041681932332 0.00148874879878196 0.000776258964354269 0.00191512105117842 0.00045972831243056 0.00039417662277884 0.00182418381169909 0.00211614993773802 0.00184868148018495 0.000934824443406822 0.000604435282516596 0.00024063068424321 0.000468855208695677 0.000474786706793608 0.00777095642477426 0.00299188414101572 0.00605683337789452 0.00140307882936372 0.00271219123971108 0.00110051795768977 0.00258548370642071 0.00453588383069993 0.00373230924879237 0.00233247740599384 0.00147811242860235 0.001235875855843 0.00141735881218937 0.000806095589035552 0.00109121941727928 NM_001014924.1 BYSL Bos taurus bystin-like (BYSL), mRNA. 0.0 3436 99.84 0.626885245901639 NM_004053.3 BYSL Homo sapiens bystin-like (BYSL), mRNA. 0.0 1970 83.90 0.606885245901639 TCONS_00132485_4 sp|Q5E9N0|BYST_BOVIN BYST_BOVIN Bystin; 0.0 888 100.00 0.997701149425287 1 coding 0 0 0 0 -0.265799675336282 0.113109008396095 0.0543862554092256 0.450593587182068 GACCCAGACCCATGAAACTAGGGAAGTGTAGCTTGGACTACAACCACTTAGAGAAGCCAACGTTAAATTCGGGAGGACCCAGCTCCAGGACCCGTGAGCTCTTTTTGGTGGGTGGGATGGGGCTTCTGGCACACCCGACCTCCAGACGCGAGGGGGCGCTGTGAGCTCCGGTGGGCTCTTGGGTGCTGGGTGTTTACTGCGCAAGCGCACTCGGGGCCTTTTTCCCTCCATACCCACGTGGGAAACTTCACGGCCCGGTTTTCTAGAAAAATGCCCAAGTTCAAGGCGGCCCGCGGGGCCGGGGTTCAGGAAAAGCATGCGCCGCTGGCCGAGCAGATCCTGGCTGGGGACGCGGTGCGGGCAGGAACCCGAGAAAAACGGCGGGGTCGCGGAACCGGAGACGAGGAGGAAGAGTACGTGGGGCCCCGGTTGACCCGACGGATTTTGCAGCAAGCGCGGCAGCAGCAAGAGGAGCTCGAGGCCGAGCATGGGAGCGGGGACAGGCCCGCAGTGCCGCGGGAGCGCACTACGCGGCTTGGTCCAGGCGTGCCGCAGGATGGGTCAGATGACGAGGAGTGGCCCACCCTGGAGCAGGCTGCCGCAAGGGCAGGGCCGGGCTATCAGGCGGAGGTGGTCGTGGACCCCGAGGATGAGCGTGCCATTGAGATGTTCATGAACCAGAACCCTCCTGCCAGGCGCACCCTGGCTGACATCATCATGGAGAAGTTAACTGAGAAGCAGACGGAAGTCGAAACAGTCATGTCCGAGGTCTCAGGCTTCCCTGTGCCCCAGCTGGACCCCCGCGTCCTAGAGGTCTACAGAGGGGTTCGGGAGGTGTTGTCTAAGTACCGCAGTGGGAAACTGCCCAAGGCATTTAAGATCATCCCTGCCCTCTCCAACTGGGAGCAGATCCTCTACATCACAGAGCCTGAGGCCTGGACCGCTGCTGCCATGTACCAAGCCACAAGGATTTTTGCCTCTAACCTAAAGGAACGGATGGCCCAGCGCTTCTATAACCTGGTTCTGCTCCCCCGGGTACGAGATGACATTGCTGAGTACAAACGACTCAACTTCCACCTCTACATGGCCCTGAAGAAGGCCCTGTTCAAGCCTGGAGCCTGGTTTAAAGGCATCCTGATCCCGCTGTGCGAGTCGGGCACCTGTACCCTCCGGGAAGCCATCATCGTGGGCAGCATCATCACCAAGTGCTCCATCCCCGTGCTGCACTCCAGTGCGGCCATGCTGAAAATTGCAGAAATGGAGTACAGCGGGGCCAACAGCATCTTCCTGCGGCTGCTGCTGGACAAGAAGTACGCGCTGCCCTACCGAGTGCTGGACGCCCTGGTCTTCCACTTCCTGGGCTTCCGGACAGAGAAGCGTGAGCTGCCCGTGCTCTGGCACCAGTGCCTGTTGACTTTGGTCCAGCGCTACAAGGCCGACCTGGCCACGGAGCAGAAGGAGGCCCTCCTGGAACTGCTCCGGCTGCAGCCCCACCCCCAGCTGTCCCCGGAGATCAGGCGTGAGTTGCAGAGTGCCGTCCCCCGAGATGTAGAAGATGTTCCCGTCACCATGGAGTGAGGATGCAGCGCTCGTCCGGGTCTGCGGAGCGTGGAAGGACTCCAGGATCCCTGCTGGTGACTGGAGGTGATTCCGAGCCTTGACAGCTGAAGACCCGGATCAGGGCCAAGACAGGTCTCGGGCCTCTGACTCCCCAGTTCTCAACAGGGGGCCGTAGTAGGGCCGGTTCCCTCTTGCGTTCTAGGCCTGCATACCTGCTCAGTTCTGGGACCTGACTTGAGGTCCCACAGCCCAGCACTCCCAGGTCCCAGCTAGGGATGGAATGGGTACTTCCTTTCAGGCTGTTGTGTCAGGTCACTGGGAGGTGGATAAAGACAAAAGGCGGGTATTTATTGAATGTCAGTGTTTTGATGTGATGGATGGAGATCTTTGCTTTCCTTGTTTTGCTGGAAGCAAGCACTGCTTCCCTCTCATGCACAGCAGTGGATTCTTACCTATTTACAAGGGAGCCACGCACTTCCCCCACCTTATTCTACAAGTCTTCTCTAGACTGTTCCCACCCTGCCAGCCCCTAGAGGGCACAGCCTTTACCTGCCCCTGACACAAGCTACTTGGGGACAATGCCAGCAACCAGGAGGTTGTTCGAACACGAGGAGGTCTCAGATTGGTTGGAAGAGCTACAAGAAAGCACCTAGAGGAAGGTGGAAATTCAGGATGAGAAAGGTCAGACCCAGGGTCACCACCAGACCAGTTAGTTCCCTTTCTAACTTTCTTAGCCAATGAAAGCATTCAACCAGGGGTTGGTAAATCAGGGTTGCGTATGCCTGTTTTCTTATAGTCCATGAGAGAAAAGTGATTTTTATATCTTAAATGGTTGTTGGGGGAGGTGGAAAAAAACAGCAGTATTTTGTGATAGGTGAAGATTATATGAAATTTAAGCTTCAGTGTCCCTAAATAAAGTTTTATTGGGACACAGCCACATCCATCCACTTCCAGGTCCTCTGACTGCTTTCACTGCTCCTGCAGCAGAGACCAGTGCGGCCTGGCTAGAACCCTGTTACTTGCTTTTGCGAATATGAGTTTGTTCCAACCTAAGTACTCTATTTGGTCATAAAGCAAATTTCATTTGTATAGTTTTGTCTTGAGACACTAGATGAAAGCAAAAAGCTACCCCCACTGTGCCAAGCCAGATGATACACAAAACGCACATACCTCAGATCTGTGCCAACGCCCCGAGCTCACCTTGTGGGTTGGCACCACACCCACATCTGGTGTCACAACCTGCCTTCCACATCCTTCCAACCTCTGCTTCCACAGCCAACTTCAGGTGTTTGTTTTTCAAGATAAAGGGCCATATTTATTACCATATGTGTTTCTTAGCCATTTAATGTGTAAAAACACTATCTTTAAAAAAAAGTGTCCTTCACTGAGTATTTGAGTATTGTCTCAAGCCCCATTTTCCCCATAAGCCATGTGGCTTGAATTGTGTGGTTTTGCATGGCGCAGTGCTTTTTAGAAATGTGCCCATCAGG EMBV3_09186 CCTTCTACGGTCACTGCACAGGAAGGGGGTACTCTGAACTGGATTCCTTAGTTCACTTTC Gene GeneID:617434|SELPLG:NM_001037628:282_cdna Constitutive 0 NULL GeneID:617434 17 GENE SELPLG SELPG selectin P ligand EMBV3_05081 TCAACAGGGTATATGGTCTGGTGGTGGCCTTGTTGGTTGCTGGGGTAGACATCTCAGCTA Gene GeneID:617390|LOC617390:XM_002693253:537_cdna Constitutive 0 NULL GeneID:617390 15 GENE LOC617390 NULL similar to olfactory receptor 654 (predicted) EMBV3_21543 CCACCGTCTCCGGAATCTCGCTCTGCCCTGGTACAAAGAATTTTACGTGAAAGATTTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17270 GACATTGTTACGTGGCCCGAGGCTCCTGTTTTGCACAGCCAAATTGAAGGCTGTTGGAAT Gene GeneID:535043|ITGA6:NM_001109981:28_cdna Constitutive 0 NULL GeneID:535043 2 GENE ITGA6 NULL integrin, alpha 6 EMBV3_29400 TCTGCTGGGGCAGCCTCGTATCCTAGCCCTCCTCAACATATACACTTGCTTATCAGGCAT Gene BVV0102_293832 + 0 NULL GK000010.2:37817714-37829006 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34671 TCTCCCTGGTGGCCGGCCTGCTCCTAGCCTCGCATCGCCTACCTCCGCCAGCGCCCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18068 TCCCAGCAAGCATCTGTTAAGTGGTATATCCAGCGGTCAGGAGATGAACATCGAGAGGAG Gene GeneID:536417|SEMA3D:XM_002686735:18_cdna Constitutive 0 NULL GeneID:536417 4 GENE SEMA3D SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D EMBV3_25715 GGAACCTTTTGCCAGCCAGTGAGCAGAAGTCCTCTTTTTGTGAAGTGATCTGTATCATTA Gene GeneID:537682|SOS1:XM_002691241:215_cdna Constitutive 2 NULL GeneID:537682 11 GENE SOS1 NULL son of sevenless homolog 1 (Drosophila) EMBV3_34391 GGGGTAGCCTTGGACTCATGGGGATACTGCAGGTGAGTAGGTACAAAGTGCTTCATCCTT Gene BVV0101_003351 + 0 NULL GK000016.2:74030040-74105848 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16699 TCCTCTATCTGGAGAAGGGTGACCAAGTCTGGCTCCAGGTGTACGAGGGTGAAAATCACA Gene GeneID:282865|ADIPOQ:NM_174742:39_cdna Constitutive 0 NULL GeneID:282865 1 GENE ADIPOQ ACRP30 APM1 MGC138982 adiponectin, C1Q and collagen domain containing EMBV3_31898 CCATCGTTTAACTTACACTGATCAATTTCAACATGGACTGTTTTTGGGGTTTTTTTTTTG Gene GeneID:513054|WHSC1L1:NM_001075595:59_cdna Constitutive 2 NULL GeneID:513054 27 GENE WHSC1L1 MGC137890 Wolf-Hirschhorn syndrome candidate 1-like 1 EMBV3_30357 ACTTTCCCTCCACCCCTATCCCCAAACCCTGAACTGCAATCAGGAAAGACAGAGGAAACA Gene GeneID:786461|DLX6:XM_002686666:119_cdna Constitutive 0 NULL GeneID:786461 4 GENE DLX6 NULL distal-less homeobox 6 EMBV3_20562 TTTGTGAGTCAAAAGCTGCATCCCAGGTGCCTGTACGTCAGGGCATTTCCGGGAGAGGAG Gene BVT0102_144241 + 0 NULL GK000005.2:82675928-82778589 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02172 TCGCTGCAGGGAGGACCGCTAACTAGGTCAAGTTATCTACTCTTCAAATCAGAGGATACG Gene BVV0102_229079 + 0 NULL GK000016.2:18461008-18739863 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068719 1 XLOC_041778 NonCoding TCONS_00068719 XLOC_041778 NonCoding NonCoding - 16:18619774-18625953 - TSS51403 3779 3 TCONS_00068719_5 72 0.167504630854723 2 0.388637099384914 0.000259308768974053 0.000208492470058857 0.000232447655658633 2.28175170615376e-10 9.61253673562264e-05 9.6927167962852e-05 0.000182901940673508 8.4448617979102e-05 0.000168887764391246 0.000256123259335593 1.96255418006596e-06 6.22494761196605e-06 6.20200159638451e-06 5.28108994414092e-06 1.03230675640761e-09 0.000114702137749468 0.000140518113022734 3.54723511590352e-44 0.000251045061822899 0.000283672846479106 0.000147102354169989 0 4.75428361924042e-54 7.24016277743461e-06 6.27792859288105e-05 1.93181016331755e-05 1.22392806815417e-97 8.34045269570379e-06 2.07386341948308e-06 0 NM_001098467.1 LOC615589 Bos taurus keratin-like (LOC615589), mRNA. 7e-29 134 98.70 0.0201111405133633 XR_111226.3 MGC39545 PREDICTED: Homo sapiens uncharacterized LOC403312 (MGC39545), 1e-19 104 72.40 0.0574225985710505 0 noncoding CATGGACTCAACGGACAGGAGTCTGAGCAAACGCCGAGAGATACTGAAGGACGAAAGCCTGGCTTGCCAACTTGGTGACTGAACAAGGAGACATTCCAGAATCCTGTTGGAAAAGCCCAGGCAGCAGATCCAAACCGGGACTGACTGTCATCAATATGCACCTGCCACCTCAAGAGTGACTTACGATGGTGGGCGCCCTCCAACATAGCGGCTCTTCCATGTTGGGGGCCTGGAGGTGGGCGGGCCCCAGGAGGCTGAAAGGATGCGAAATGCGCATGCGCCTGCCGCGCAACAGTGGGAAGCCAGAGCCTGGAATTGTACACAAGCCGGGTCACAGTAGCAGGCATTAGGGGTTCAAAGGGGTAAGCCTAATCTCAGACTAGACTAAGCAGGGGGGAATCTCCTCCCTAAAGGCAAAACTCAAGGCCACTGGACAGTCTTGGCTGACAAATTTTCTCCAATAAAAGACACCTGGGAACCTTATGTAACTGAAGGAGCTCGGCATCTGACCGGAAGTAAGTCTGAATGGGGGCTGGAGGGTATTTTGGCGCTAAACACGCAGAGTGATATTCAACGGGTTGGCTCTCTCATCCTGGAGACTGTGCTGGCATTTCAAGCATGTACTTGGCTTCAAAGGCTCGGAGCACCAGGTTGACCAAAGGCCTGCCGTAACTGCCAAGTACACAAGGTGCTTGTGCTTGTGCTTGAGCTACCGCCGGCTCACAAGGTGTGTATCCGCCCATCCTGGGGCAAGCAGGGCGGGGGCCTGAAGAGGCCGGCTCACAGGAGCAGCGGATTGAAGGTGCCAAACCCTAAGGAGCATAATCAACCTTAAGGCAAAGCAGGTGGGTGCATCCTGCCTTGATGGAGAACACCTGGCCGGGTGCCCCAGAGGCTGCTGGAAAGGGAGCGAGCACTGGTTTCTGAAACCCAGGGCCCGATCCTGGCAGGAGGTTCAAATGAGGACTGAAGGTTGTCAGTTAGCATCTGATGTCTCAGACTGAGTTTTGCGTGGACTTCCCTCTACACTGGAAGCTCTGCATGAGTTTGGGGCCAGAACCTAGCTCAAAATCCTGGAACGCCTTGTGAAGCGGCAGTTTAGGCCCATGAGCATGGAGCAGGTTTAGGGTAGCTGGTGGCCTGGAACAGATGTCGGAGAAGCTGAGTCACCGAAGCGGGGTCTTAGAGAATATTTCCCCTCCTGGCAAAGCGCAAGGTTACTCTGCTACCTTTTCAGGCCTCAGACCCTGCAGGCTCGCCAGAGTTTGCCAAATCAAAGACTCCTGGGAGCCCTGGTTCCAAGAGAGGCCGGGGCGCTGATCCCACAGGAAGTTCAAACGGGAACTGTCAGTCGTCAGTTTGCAGCTGCGGCCTCAGAATGGTTTTTAGGGTGCTGGGGCCCTTCACCATGGAGGCTCTGCTGGTGTCTGGAGCCCGGACCCAGCTCCGCAGGCCTGGAAAACCTCGCTGCAGGGAGGACCGCTAACCAGGTCAAGTTATCTACTCTTCAAATCAGAGGATACGTTTGAAGAAAAGGGCAGTAGCTCTACATGCAGAGACTTTTCTGGAGCAGACAGTCGTGGCATTGCCAGAGAAAGCCATCTGCATTTCCTCAAATGAACAGAATCCTTCAGTGGTGCCTTGTTTAGTGATTTGGCATAGTGGTGTTCACAAACTTGGGATGAGCAGGGGGAAAAAAAAAAAAAAAGACATCTAGAAAGATTTGTAAATGGAAAGATCACCTTGGAAGCCCTATCTGTAACCTAAAAGGAAGAAAACAAAAACAAATACTCCTTGTTACTAAGAGGAGGGACATACTGTCCTGTTTAAGTTTTTTCCCTAAGAATCTGAAAGACCTATAATGTTTAGATTTCTAAGACAGTGAAATCCAGTATGTCAGAAACAGTTCATGTTGTATTTTATTTTTTTAACACTTTCAAATTTCCTAGCTATTAATATGATTCTCCCTTTAAAAATGTGGTGATATTAATATACGTTTTTTTAGCCATGTTTAAGGGTAAACTCAGCTGCATTAAGTATATTCACATGGTTTTGCAACCATGACCACCATCCATCTCCAAAATTTTCCCACCTTCCCCAATTAGAAACTCTGTGTCCATTAAACATAACTTCGCATCCCTCCCATCCATCCCACTCCCTGGATGACCCACATTCTGACTTCTGTCTCTATGATTTGAACTATTTTAAGAGCATCATAAAAAGTTCTTTAATAACTGGCTGATTTTATTTTGCATGTTCTCAAGGTTCATCCATATATATAAAGACAGCATCCTGTTTTCCATATGCATTTTCCAAATGCAAAACCATTTTGCATTTCCCTCAGAGTGTGCAGGGTTCCAATTCTTTGCATCTTCACCAACACTTGCTTTTTATGTTTCACTTGGTTTTAACAGCAGTCATCCTAGTGGGTATGAAGTGATATCTTATTGTGGTTATATGTATCCTTTTTAGTAGGATTTACACTCAACAGCAACAATCTAGAAAGAATAGACAAAAACCAAGGTTATGATTAATTCTCTACCCTTTCTCACCCTAAGTTTTATGTTTGCATATATTTATTTCTTGAGTTAGAATTCAGGAGATCTATATAGTCATAAACAGAGATGGAGATCCCACTTGATAGTGAGCAAAACTAGCCTTGTTATTGGGGATTAAACATAGCTGACAGGTGTAGCTCTGACTGTGAAGGTATTATGCTATGATCTTTCATGAGCATTGTGGAAATTCATTTTGAATAATACATAAATTTCTAACATAATATTCTTTCTCAATAGAGGGTCTTTTAAATAAAATATCATAATTTTGACAATTAATTATGAATCAAAAATATGTAGATTAACATGACTCTGGACATCAGGAAAGCATGTGGTGTGTTTTATCTGAAAGGAGTCCTACATGAGTCCGTCTGTTTCATGAAAAAATTAGTCAAAAGATGAATGGCTTAATTTTTCTCCTTTCCTGCCTCAGGCTTATTTTAAATATCTCAGGTGGTCTAATGTAATTGGGCAATAAAATGACATTTAATAGAATTTTGTTTGCCTGGTCACCACGCTTAGTGTTATTGACACATGATTTAAAAGTACAGAGTAAGATTTTTTCCCCAATTGCATCAAAGATCACATTTACTTTTTTTGTTTCCTCACTAAGTCCAGAGTCCTAATAATCTCCATTCTATATTTGCAGGTTAAAATTGATAAATTCATAAATGTTGATTACTTAGCAAGTAGATTTTTCTGATTTTGTTTGTATTTTGAATATTTGGAATAATCATTTTAAAAATGTATTTGCAAATATTTTACACCAATACCTTATTTTAGCAATTTAATTTAATTAGTTTTACTCCCTGAAGTTACATAATTTTAGAATATATGGACTAGAATGAAACAAAGAATTTAATCAGATCAACCTATGTATTAATTCTGAAGATGATAAAATTGATCCCTAGAAAAAGAGAACTTTGTTAGGAGGCTGTCTATTTAATCCATCCAGGCTTGAATTAAATTTCTTGGTGAGGAGGTAGTAATTAGTGAGTTATTGGCTTTATGTCAACCACATCACCATAGTCCCAATGGAAGAAAGACTCCATGAAGTAGTTTAATTGCTAAGTCGTGTCCGACTCTTTTGTGACCCCATGGTCTATATAGCCCGCCAGGCTCCTCTACCCGTGGGATTTCCCAGGTTTGGATAAGAAAGCTGTGGTACATATACACAATGGAGTATTACTCAGCCATTAAAAAGAATACATTTGAATCAGTTCT TCONS_00068714 s 5' 158768 TCONS_00068714 s 5' 161056 EMBV3_30983 CTGCTAATGTGTTAGAGCAAAGATCTGCCATCCCCAGTTTTCCCTTGCTTGGTCTCTGCC Gene BVV0102_136583 + 1 EMBV3_38416 GK000001.2:83580994-83583027 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001378 TCONS_00001379 TCONS_00001380 1 XLOC_000347 NonCoding TCONS_00001378 XLOC_000347 NonCoding NonCoding - 1:83581024-83582692 - TSS702 813 1 TCONS_00001378_1 78 0.360393603936039 2 0.513497300539892 2.2056712320516e-37 9.8877582167678e-05 0.000160039046133155 5.10710533970057e-05 7.50511085817054e-05 1.35352283271901e-146 1.39054188342953e-22 1.30684253720792e-193 2.91148366929536e-05 0.00017763732909312 0.000136589370537256 4.77769192835674e-135 2.44441256333634e-05 0.00015622111005241 0.000133792522761544 0.00108209504723198 6.12631638398961e-05 0.000335247604737025 0 4.03530138473629e-05 6.09120964812763e-05 0.000460786593288602 0 0.000626515599413814 7.00630199641891e-05 1.15336128016732e-30 1.91777741345315e-266 3.00792676813617e-93 0.000499981317976756 0.00059161156896036 XR_233337.1 LOC101907353 PREDICTED: Bos taurus uncharacterized LOC101907353 (LOC101907353), 0.0 1337 100.00 0.910209102091021 0 noncoding 0 0 0 0 -0.0936909386510987 0.566916146072855 0.0264991130543306 0.630942397910624 CGGTCAAGGCCCGCCTCCTACCGGTGCCCCGAAAGCTCGCCCTTCCTTCCAAAGCGCATGCGAAACGGTGACGGAAAGTGGAATTCTAACGGCAACTACAGAACTATCTGGTTTCTTCAACAACACTGCAAAAGCTGAGGGAGAACCTGTGGCTTTTAAGATTTAAGAAGCATCCACCAATCAAGGAACCTTGTTTGGATCCAGATGTAAGTTGTGACAGTTTTTTTGTAGGACACTTAAGCATGAACACAGATTGGATGTGACATTAAAGAGCTAATCACAAGTTGAACCACTATGATGGGAGTTCATTATATATTTTCTACTTGTTTGAAATTTTCTTACTAGATTTCTTAGGTTTAAAAAGGCAGAGACCAAGCAAGGGAAAACTGGGGATGGCAGATCTTTGCTCTAACACATTAGCAGAATATGGAGCATTCCCCTCAGGGTCCTGTTCACACAATTCTTTGGCAAGGGGAAGGCATGGAGGGAGGAATTATCTAAGAGGCCTGTCTGCCTGTTCAGTGACCCCATGGATTGTATGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTTTCCAAGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCATCAGGGAATCTTGCTGACACAGGATCGAAGCCTGGTCTCCTGCATTGCAGGTGAATTCTTAACCCCTCAGCCATGGGGGGCGGGGGCAGCCCGTAAGAGGCCCGGGAAGAGTGAAATTTTTCCTTTTTACAACATACCCACCAAGGTCTGGGAAGCTTGAGTAACTGGGAAGAGGATAAAATTAAGAAGTCAGTCAGTTTC TCONS_00004350 TCONS_00004353 r 5' 0 TCONS_00004350 TCONS_00004353 r 5' 0 EMBV3_08569 ATGGCATGTGTCTCTAGGGTAGCTCACCAATAGCTGAAAGGCCAACACCTGTCTAGGAGC Gene GeneID:100138230|LOC100138230:XM_002696811:576_cdna Constitutive 0 NULL GeneID:100138230 21 GENE LOC100138230 NULL similar to Huntingtin interacting protein K EMBV3_12926 TGGGCCAGATCCGGTACTCTGCGACTTTCTATCTTTAAATGGATGAGATGGCTACCACTC Variant GeneID:505687|PLS3:NM_001045923:126_cdna 64^148 2 EMBV3_15750 GeneID:505687 X GENE PLS3 MGC128570 plastin 3 (T isoform) EMBV3_35447 AGACCGCGTTCCTGTGCCCAGTTTCCAGAATTCCTTCAGCCAAGCTATTGAAGCAGCCTT Gene GeneID:520757|RNF10:NM_001076869:198_cdna UTR3_Alt 2 NULL GeneID:520757 17 GENE RNF10 MGC139926 ring finger protein 10 EMBV3_02312 TGGAGAAACAGATGAAGAGAAGTTATTTGTGGAAGCAGGGAAGGCTTTGTTGGCGGAAGG Gene GeneID:515228|MRPS23:NM_001046192:24_cdna Constitutive 2 NULL GeneID:515228 19 GENE MRPS23 MGC134172 mitochondrial ribosomal protein S23 EMBV3_22095 AATCAGCCAGTCTGAAGGGAAGTGGGAGGCCAGAGATGAGAATTCTCTGAAAAGATTGTG Gene GeneID:524692|DOCK3:XM_002697072:584_cdna Constitutive 0 NULL GeneID:524692 22 GENE DOCK3 NULL dedicator of cytokinesis 3 EMBV3_10930 CAGGTGCTTCTGATGAACTGAAAATATGTATCTGACCTGTGGGAAACTTCATGGGTTTCC Gene GeneID:613575|CNIH:NM_001034739:119_cdna Constitutive 1 NULL GeneID:613575 10 GENE CNIH MGC139328 cornichon homolog (Drosophila) EMBV3_39324 GACAAAACTGGGACTTCGTGTGACACTTGACTCAGATCAGGTTGGCTATCAAGCAGGGAG Gene GeneID:613428|ZFYVE9:XM_002686404:272_cdna Constitutive 0 NULL GeneID:613428 3 GENE ZFYVE9 NULL zinc finger, FYVE domain containing 9 EMBV3_35282 CCTCTGAAAATCACTGGTCCACAGAACATGCACAACTATACTGATACCAAAGGCACGTGG Gene GeneID:790057|BOSTAUV1R428:XM_002695463:143_cdna Constitutive 0 NULL GeneID:790057 18 GENE BOSTAUV1R428 NULL vomeronasal 1 receptor bosTauV1R428 EMBV3_12044 GACCAGACCCCTTTGTCCTCTATTTATTGAAACTCAGGCTTAGAGCCGCCTGGGCAGCAA Gene GeneID:505069|SLC13A2:NM_001034234:61_cdna Constitutive 0 NULL GeneID:505069 19 GENE SLC13A2 MGC127510 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 EMBV3_00390 GCGAGTTATCAGGAACATGTGAAGCAACTGACTGAGAAGATGGAAAAGGAGAGGGCCCAG Gene GeneID:781710|LOC781710:XM_002686247:18_cdna Constitutive 0 NULL GeneID:781710 3 GENE LOC781710 NULL hypothetical protein LOC781710 EMBV3_36545 GAAACCTTGCTGAGTGAAGAGTTGGGAGAGCTGAGTTTTGGTTCAGCCACTAACAAGCCC Gene BVV0102_228820 - 1 EMBV3_23542 GK000010.2:81677906-81751516 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20814 GGAAGAATTAGAAGAACTTATAGGAAAGGCGGCCCATGGTGAAATTAAGATAACCCCATG Gene GeneID:514293|IDI1:NM_001075659:26_cdna Constitutive 0 NULL GeneID:514293 13 GENE IDI1 MGC139111 isopentenyl-diphosphate delta isomerase 1 EMBV3_03667 GTCCCATCATCTGATTCCTCAAGGTCCAAAAGCTGAGGACCCCGAGTGGCCATTCACTTG Variant GeneID:281603|ADCY7:NM_174230:32_cdna 246^320 1 EMBV3_33887 GeneID:281603 18 GENE ADCY7 NULL adenylate cyclase 7 EMBV3_32638 GGTGACTCCTGCAGGGTACTTGTAATCTCACAACTTAGCATCGCTCGCCTGCCCATCGAA Gene GeneID:526780|ADAMTSL2:XM_002691664:415_cdna Constitutive 0 NULL GeneID:526780 11 GENE ADAMTSL2 NULL ADAMTS-like 2 EMBV3_29344 ACAGTGGCTTAGTTCCCATAGGTCAACCATTAGGTTAACAATAGTAGTCTCAATCCAGGG Gene BVT0102_026515 + 0 NULL GK000023.2:44674041-44720345 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37331 TGCAGCCTACAAAACCACATCCTCCCTCTATTTTTCTCCCCAGTTGCACAGAGTATTGGC Gene GeneID:517044|TBX18:XM_002690210:2_cdna Constitutive 0 NULL GeneID:517044 9 GENE TBX18 NULL T-box 18 EMBV3_30412 CACAGTAAGCATTTATGGTCCCTCCTCCCTGGGTTACTAGTTTGGAATGTCCACTAGACC Gene GeneID:281158|FECH:NM_174054:14_cdna Constitutive 0 NULL GeneID:281158 24 GENE FECH NULL ferrochelatase (protoporphyria) EMBV3_07764 ATGGCAGGATCTGGTGCCTTGAGGGGGAAGGTTCGCAAAATGGTCTCCTTCAACCGAAAA Gene GeneID:511277|SPOCD1:XM_002685658:412_cdna Constitutive 0 NULL GeneID:511277 2 GENE SPOCD1 NULL SPOC domain containing 1 EMBV3_30378 ACCGCCGCAGTCCGTGAAGTCTGTGAGGAGAACCAGGAGAGGAAGCATAGAACGTATGTC Variant GeneID:618855|NUDT3:NM_001082466:173_cdna 516^560 3 EMBV3_42746 GeneID:618855 23 GENE NUDT3 MGC148951 nudix (nucleoside diphosphate linked moiety X)-type motif 3 EMBV3_41959 TGGCCTTCTCCGTCACCCTCTTCACCATCTTTGCGTTTGTGTGCATCAGCGTGCTCTTGT Gene GeneID:540307|SLC8A3:XM_002690987:271_cdna Constitutive 0 NULL GeneID:540307 10 GENE SLC8A3 NULL solute carrier family 8 (sodium/calcium exchanger), member 3 EMBV3_37462 CAACATGGCAATCGGGGACATGAGCTCTCTGCTGACCTCCCTCGCGGAAGAAAGCAAATT Gene GeneID:785371|GLI3:XM_002686896:80_cdna Constitutive 0 NULL GeneID:785371 4 GENE GLI3 NULL GLI family zinc finger 3 EMBV3_42524 TTACAACCCGAGTCCAGGTCTAAAACCCTCTGGAGTAATCGGTGGCTGTGTAGTGATCCT Gene GeneID:505285|PTPRE:XM_002698569:98_cdna UTR3_Alt 2 NULL GeneID:505285 26 GENE PTPRE NULL protein tyrosine phosphatase, receptor type, E EMBV3_13927 AATATTGAGTTGCCTCACTACTTCTGTGACCTCACCCCGCTCCTCAGACTTTCGTGCACT Gene GeneID:786833|LOC786833:XM_002688764:79_cdna Constitutive 0 NULL GeneID:786833 7 GENE LOC786833 NULL similar to olfactory receptor Olr1121 EMBV3_13749 AACGCAGGTGCCATCACCATTAACAGTCACCGACAGCTTACTTAGGGCAGCGCTTTCCAA Gene GeneID:768245|PPAPDC3:NM_001078118:229_cdna Constitutive 0 NULL GeneID:768245 11 GENE PPAPDC3 MGC143389 phosphatidic acid phosphatase type 2 domain containing 3 EMBV3_13496 GTTCTGGCTAAGATTGTGAATTACATGAAGGCTTTAGGGGACCAGATACTATTTGTAAAC Variant GeneID:510921|GTF2E2:NM_001046065:13_cdna 585^875 1 EMBV3_18338 GeneID:510921 27 GENE GTF2E2 MGC127990 general transcription factor IIE, polypeptide 2, beta 34kDa EMBV3_17983 TCTTGTCCATACAGGGGAACCTGCAGCTCGACTACCCCATCTTCTACGTGATGTTCGTGT Gene GeneID:616724|NIPAL3:XM_002685709:394_cdna Constitutive 0 NULL GeneID:616724 2 GENE NIPAL3 NULL NIPA-like domain containing 3 EMBV3_36537 CTGTGATTGCGTGTATGTGTGCTGAAACTGTAAAGCTTTTATGACTAATATTAATATCCC Gene GeneID:529146|MAP3K7:NM_001081595:41_cdna Constitutive 2 NULL GeneID:529146 9 GENE MAP3K7 MGC154981 mitogen-activated protein kinase kinase kinase 7 EMBV3_33358 GCTTATTATTGGTCCTCCAGATACACTTTATTGATAAAAATGGTGATGTATGCATTTCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12348 TCTGATTGTGGCTGATGCCTGGTTACAAATTGATTTTTAACCCAAGAATTATGATTATTT Gene GeneID:525252|ATXN7L3:XM_002696041:325_cdna Constitutive 2 NULL GeneID:525252 19 GENE ATXN7L3 NULL ataxin 7-like 3 EMBV3_07030 CTCTGTAAAATACATGTATCATTCTCACTTTCTATCTCATTTTAAAATATTGTAAATATT Gene GeneID:782964|DIAPH2:NM_001083789:12_cdna Constitutive 0 NULL GeneID:782964 X GENE DIAPH2 MGC148327 diaphanous homolog 2 (Drosophila) EMBV3_09085 ATGTACGTCTGCCAAAGATCCCCGCCCCCCGCAACCAGTATAGAGAATGATGAATGAGGA Gene BVT0102_127417 + 1 EMBV3_28687 GK000023.2:16740810-16747957 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43715 TTCCTAAAGTGGAGAAAGTATGTTGGAGATTCAGGGGCCCCGGGCTTAGAGACCCATCAT Gene BVT0101_060129 - 1 EMBV3_14822 GK000030.2:19026102-19057640 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246499 1 XLOC_151005 NonCoding TCONS_00246499 XLOC_151005 NonCoding NonCoding - X:19018420-19044350 - TSS184792 971 1 TCONS_00246499_4 119 2 0.962628716880713 4.67066885206896e-06 1.14158261421121e-05 0 1.08327397773746e-05 1.90674307660992e-06 0 1.16363925290926e-05 5.53759997702385e-07 9.28660472684876e-06 1.06273905705962e-06 3.12493341832645e-05 3.37784191035163e-05 0 1.45334824738745e-06 0 0.00140749216165835 0.00272525779158544 2.58402595717489e-05 1.28679714346785e-06 8.82039874091244e-05 5.3007623619632e-06 0.0026531794665389 0.000143295419550164 0.000800929570729934 4.67942535258272e-05 8.35381209364564e-07 1.29729213279431e-05 6.59470233055613e-06 1.66653063823659e-06 0 XM_005199981.1 LOC618452 PREDICTED: Bos taurus uncharacterized LOC618452 (LOC618452), 0.0 1146 91.43 0.809474768280124 NR_024359.1 LINC00086 Homo sapiens long intergenic non-protein coding RNA 86 (LINC00086), 6e-23 113 84.31 0.104016477857878 0 noncoding 0 0 0 0 0.0137574919770164 0.895468757176939 0.0365225341738063 0.444199800634808 ACCAGGGGCCTCCTTGGGGCTGATGCGTAAATGTGCCCTTTTCAAGTTCGGGTCTCACGCTCTGGGTGACTGGATCCCCAGCCGCAGCCTCTTCCTGGGCCAGCCTGAGAGGACCTGGGGAGGGCACTAGGGAGGGTCTTTACTTAATATGTGCGTGCCTGTGTGTGAGTGCGCATGTTGAGTGCATGTGAGTGTGGGGATGTGTGTGTGAATTTGCATGTTCATGCATGAGGGCTTGAGTGTGAGCATGGGGATGTGTGGGTGTATAAGTGTGGATGAGTGTATGGGTATGAGTGCACAGATGTGGGTGTGTGAAGGTACTGGTGTGAGAGTGTGTGTGTGGGTGTGAATATACATGTCAGTGTGCATGTGTGAATGCGTGTGTGTGAGTGTTTATGCACACATGAGTGGCTGTGCGATGCAGACGGTGCTGAGCTGTTTAGTGGGTGTGCTCTGGGGGACGGGCATCCTGTCCTCCCCAGGCTCCCAGCTCTGTTGGAGCTGCCTGGGCCCTGGGAGGCCGCTTCCTAAAGTGGAGAAAGTATGTTGGAGATTCAGGGGCCCCGGGCTTAGAGACCCATCATCACCTGCAGAGAATCCCCCCTCCCCATGGGGCTCTGGCTGGGGCTGTCCGCCCCCAAAGGTATTGGCTGTGGGAAGGGCGGGGACACGTCCTCAGCACGTGCTCCTGCCACTATTTTTCTTACCATTTTGATCTTGAGTAGTTTGCTGCTGCTGCTGCTCTCCCACCTCTTCCTCATCTCCTCACTAGGCCTCTGCTGCTCTCCTCTCTGTGTACTTTATTTGCAATCTCTTTTTCAGGCAGTGGAGGTTCTACACCATCACCGACTTGAATAAGACAGCTTTCCCTTTTCTGTGTGTGATGAACTCTCCACCAGTCAGCGCAGTCTGGTCAGAGAAATGTTCTTGTTTTCAGTGTTGTCAAATCTTGTGTCTGTCTAAGTTAATAA TCONS_00243895 r 3' 25528 TCONS_00243895 r 3' 25552 EMBV3_13399 ACCTGCAACTATTACGCCAACTCCTACAGCTTTTGGCTGGCGACTGTAGATGTGTCAGAC Gene GeneID:511602|COL4A5:XM_002699860:58_cdna UTR3_Alt 2 NULL GeneID:511602 X GENE COL4A5 NULL collagen, type IV, alpha 5 EMBV3_27334 CCAAAGGATAGTGGTATTTTTAAAGGAAAGTGCATATAGAGAAAAGCACCCGTGGGTTGG Gene GeneID:512613|CDKN1B:NM_001100346:83_cdna Constitutive 0 NULL GeneID:512613 5 GENE CDKN1B NULL cyclin-dependent kinase inhibitor 1B (p27, Kip1) EMBV3_31593 GCACCAAGGACCCCTGCTGGAGGCTCGATGTTGAATGTATCCTTATACTGGTCCTTACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35508 GAAGAGCTGTTTTAAAGATTGGACTTCAAGGACACCATTGCAGTGGCTGGATTTGTTGTT Variant GeneID:511292|POT1:XM_002686916:142_cdna 285^376 2 EMBV3_34667 GeneID:511292 4 GENE POT1 NULL POT1 protection of telomeres 1 homolog (S. pombe) EMBV3_10153 GGACTCATCTAACGAGTATGAATTGACTTGGGTTGCCGGCACTGAGGTTTCCAGTGAGTC Gene GeneID:519254|DDX18:XM_002685426:23_cdna Constitutive 0 NULL GeneID:519254 2 GENE DDX18 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 EMBV3_40068 AGGTGGGGAAGCTCCTGGGCACAGAGAAGGTGGACACCCCGGTGAACAGGAAGTCAATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15327 AGGGAGTGGCTGTGCTAAATACCTCAGTAGCACCCATGCTGAACCCCTTTATCTACACTC Gene GeneID:788126|LOC788126:XM_002687485:349_cdna Constitutive 0 NULL GeneID:788126 5 GENE LOC788126 NULL similar to olfactory receptor, family 6, subfamily C, member 1 EMBV3_20257 TCTATGGCAAGAAGCCGCCAGGAAAGGGCACAGAGCAGAATCCAAGACAGCATAATGAAC Gene GeneID:505644|SCNM1:NM_001034254:46_cdna Constitutive 0 NULL GeneID:505644 3 GENE SCNM1 MGC128702 sodium channel modifier 1 EMBV3_29329 CCATGTGCCTTCAGCACCAGTCTGTAAAGGGCCTACTGTCAGGAAGTCATTCCTTCTGTT Gene BVT0101_062546 + 0 NULL GK000004.2:104017708-104133818 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34186 GTGTGGGCCGCCCAACCCGGCCGAACTGTACAGCTCCGCTTGGCGCGAGAGGTGATTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14064 CTGAGCCTGCATACAGCAACAAAACTTCCTATGTGCTCCAACTAAGACACAGTGCAGCCA Gene BVT0102_367893 - 1 EMBV3_28035 GK000015.2:17100713-17190069 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35827 GGATCCTTCAATCCCTCTACCACAGGGACCAGTTGAGATGTCCAGAGCCACTGTGTTTCT Gene GeneID:514440|RAD18:NM_001035295:95_cdna Constitutive 2 NULL GeneID:514440 22 GENE RAD18 MGC134015 RAD18 homolog (S. cerevisiae) EMBV3_13149 CTGCAGTCCACTCACTGGTACCTCTATTTAGTTCAGAGCCTGCGATTCTTTTGTCTCTAG Gene BVT0102_340782 + 1 EMBV3_17428 GK000012.2:52477381-52496958 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15872 CATGTCCATCAGGTCATGTCACTCACTTGCTCAAAATTATCCAGTCGCTTCCATCTCCAC Gene BVT0102_380887 + 0 NULL GK000007.2:32128248-32140922 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220034 1 XLOC_133351 NonCoding TCONS_00220034 XLOC_133351 NonCoding NonCoding - 7:32136548-32137201 - TSS164032 653 1 TCONS_00220034_1 33 0.23583460949464 1 0 0 0 0 0 0 0 0 0 0 0 0 5.47576812385562e-06 0 0 0 0.000404465689413864 0.00272043629320159 0.00242071534493623 0 0 0 0.000477287148746755 0 7.70197328055393e-05 0 3.2368119972463e-05 0 0 0 0 0 noncoding TTCCATTTTAAGTGGGGATGGAAGCGACTGGATAATTTTGAGCAAGCGAGTGACATGACCTGATGGACATGTCAAAAAGATGGCTCTGGCTCTTGTGTGAAGGACAGACTACAGTGAAAGTGGAAAGCTGAGAGAGGCCCAAGAGGATCCTGCAGCCGAGAGCACAGAGCACTCCCTCGGTTTAATCAAGGGAGATGGAAAAGCACTGATGTATAATGTAGGGTAGAAATACGAGCAACTGTCACAACACTTTTCTGACTTAAATATTCAAATGTGATTCAAAAATGCACACTACAGTTTAAAAAAGAAAAAAAAAACAGTTCTAACGGGAGGCTGATGGGGGAGAGAGACAGCTCAAATTTTGTGGATGATCAGTGCAAATCCTGATCCCTTTTATAACCTGGTAGCCTTAGTCAAGCTATTGTGCCTTTTTAGCCTTCATTTTTTTCACTGTAGAATGGAAAAATAAGAACACATACCTCAGGAAGATGCTGGAAGGCTTTTATGGGATAATCCATGGACAGAACTTAGCCCAGATTAGTGTTTTATCGTGTTAGTTACTTGCTAATCTCTCTGATCTTCAATTTCTTCTTCTATAAAAACTTGTAAAAGCTGTGTCAAGTTATAATGAGATCAAGTATGAAAAGCCTTAG TCONS_00216351 . 3' 334 TCONS_00216351 . 3' 986 EMBV3_34763 ACACCCCACTCACACCAATGGACAGATCATCAAAACAGAAAATTAATAAGGAAACACAAG Gene BVV0102_193243 + 0 NULL GK000009.2:60923636-61106319 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130534 TCONS_00039848 TCONS_00229772 TCONS_00048562 TCONS_00251674 TCONS_00055628 TCONS_00056852 TCONS_00251531 TCONS_00150015 TCONS_00070926 TCONS_00179154 TCONS_00197296 12 XLOC_079242 XLOC_023665 XLOC_139266 XLOC_028694 XLOC_154615 XLOC_033436 XLOC_034655 XLOC_154472 XLOC_091796 XLOC_042703 XLOC_108927 XLOC_118958 Coding TCONS_00150015 XLOC_091796 Coding Coding - 26:11532247-11538792 - TSS112494 4178 1 TCONS_00150015_12 124 0.804451890856869 2 0.361858190709046 0.00219104243493564 0.00239427836847623 0.00133228330166534 0.00108337864064317 0.00191634899179236 0.000599557657688176 0.000422547098469683 0.000972850273330613 0.00268063347121649 0.00045951830552785 0.000209851295959926 0.000276757690138394 0.000146966585080107 0.00257225408342361 0.00223750057224574 2.52863210193486e-05 9.93435840833436e-07 0 0.000194377467486132 0.00121598844531343 0.000449104245415371 1.7761303169157e-07 1.97621878965974e-05 8.02520154466831e-06 0.000963712857351226 0.00152854017732444 0.00180612813561353 7.12686678386746e-05 4.76397700842662e-05 0.000115121990512847 NM_001191412.1 RPL21 Bos taurus ribosomal protein L21 (RPL21), mRNA. 0.0 951 91.78 0.159406414552417 NM_000982.3 RPL21 Homo sapiens ribosomal protein L21 (RPL21), mRNA. 0.0 677 88.13 0.128291048348492 TCONS_00150015_12 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-37 136 52.46 0.975806451612903 0 noncoding CTGGTTTCCCTGGTAACTAATGAGCCCACCTGACATCAATTCCACTATAACTGGTAACTTCCCTCCCCTCTTCCCCTGGCGAAGACTGCCACCACATTCTGCCGCTTTCTGCAGCACACTATGAAGTGTCGCTCCAGGACCTTTCTTCAGATGTGCTCTGTGAAATACGTTGCAAGGTATATCTGTCTGCAACAGGACAGTCTGAACATTGCTTGCCATTCAGTGCTCACGAAAGGAAAGTATTAAGACTGAGGAGAGTCAAGATTATGTAATTTTTTCAAATTGAAGATTTGTGACAATCTTGAATCAACCAAGTTCATTGATACCATTTTTTCAAACACCATTTGCTCACCTTGTGTCTCTGTGTCTCATTTTGAGGTTAAGCCCTGAGCCTTTGGAGTGGGAGCACTGACTCCAAGACCCTGGACTACCAGAGAACTAACTCTAGGGAGTATCACATATTGAGAACTCACACAAAGGAAACCACTTGAATACAAGACCCGGCATCACCCAACCACCAGGAGCACCCTGTACAGGAAGCCTCATCTAAACAACAAACAAAACAAAAATACAAACCCAGCAGACAGGATTACCACCTCACTCAGCCTTGCCCATCAGAGGGAAAACAAACAAACAAACAAACAAACAAAAACAACACAAATCGCACCCTATATGAAGCTTACACAAACCACTGGACCAGCCTTAGGAGGGCAGAAACCAAAAGGAAGAAAGAATTCAACCTTCAAGGCTGGCAAAAAGAGACCTCAAACACAATAAGGTAAAAAAAAATAATGAAAAGGCAGAGAAATACTACACAAATGAAGGAACAAATTAAAAACACAGAAGATCAAATAAATGAAGAGGGAATAGGCAAACTACCTGAAAACTAATTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAAATGCAAGAATCAATTAACAAAGACCTAGAAGAATTAGAGAATAGACAGTGGGTGATGTGTTTTCAAATCTAGTGTTTCTTCTTCCTGAAAGATGTAAGATAGTTTGTTATTCAGTATGTTCCATTGGTTAATAAACTGCCAGATATTGCCAAAATAAAATTACTACAATTACTACAATTAAAAATACTCTAGAAGAGATCAATAGCAGAATATCTGAAGCTGAAGAGTGAATCAGTGAGCTGGAAGTTAAAATGATGGAAATAACTTCTGAAGAGCAGAATAAAGTATAAAGAATGGAAAGAACTGAGGATAGTCTCAGAGACCGATGGGACAATATCAAAGGCACCAACTTTCGAATTATATGGGTCCCAGAAGAAGAAGAGAGAAAGGAAGGGTATGAGAAAATTTTTGAAGAGATTATAGTTGAAAATTTCCCCAACATGGAAAAGGAAATAGTCAATCAAGTCCAAGAGGTGCAAAGAGTTCCATACAGGATAACCCAAGGAGAAACACACCAAGACACATATTAATCAAACTAACAAAGACTAAACACAAGGAAGGAATATTAAAAGCAGCAAGGGAGCCTGTCGGCTGGAACCACCATCTTCCAGTAATTTGCCAAAATGACCAACACAAAGGAAAAGAGGAGGGGCACCTGCTGCATGTTCTCTAGGCCTTTCAAAAACATGGAGTTGTTCCTTTGGCCACATCTATGCAAATCTACAAGAAGGGTGATATTGTAGATATCAAGGGCATGGGTACTGTTCAAAAAGGAATGCCCCACAAATGTTGCCATGGCAAAACTTGGAGAGTCTACATTGTCACCTAGCATGCTGCTGGCATCACTGTAAACAAACAAGTTAATGGCAAGATTCTTGCCAAGAGAATTAATGTGCCTATTGAACATATTAAGCACTCTAAGAGCCTAGATAGCTTCCTGAAACATGTGAAGGAAAATGATCAGAAAAAGAAGGAAGCCAAAGAGAAAGGGATTTGGGTTCAGCTGAAGCACCAGCCTGCTCCACCCAGAGAACACACTTCATGAGGACCAGTGGAAAGGAACCTGAACTGTTGGAGCCCATTCCCTATGAATGTAGGGCCTGTTGGGTGTAAGAATAAAGACCTGGACTGTACAAATGTTTCTCTTAATTGAGTAGAGATGTTGTGTCTAAATTCAGTGGGTGATGTGTTTTCAAATCTAGTGTTTCTTCTTCCTGAAAGATGTAAGATAGTTTGTTATTCAGTATGTTCCATTGGTTAATAAACTGCCAGATATTGCCAAAATAAAAAAAATAAATTGCCAAAAAAACCAGCAAGGGAAAAGCAACAAGTAATATACAGGGAAACCCCATGCATTTAATAGCTGATGTTTCAGCAGAAACTCTGCAGGCCAGAAGGGAATGGAAGGATATATTTAAAGTACTGAAAGGGAAAAATCTACAACCAAGATTACTGTACCCAGCAAGGATCTCATTCAAAATTGATGGAGAGAGAAAAAGCTTTTCAGACAAGCAAAAGTTAAGAGAATTCAGTGCCACCAAACCAGCTTTACAATAAATGTTAAAGGGACTTATATAGTCAAGAAATACAAGAGGAAAAAAACATCTACCAAATCAACCCCAAACAATTAAGAAAATGGCAATAGGAACATATATCAATAATTACTTTAAATGTAAGTGGATTAAATGCCCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAAACCCACTTCAGACCTAAAGACACATATAAACTGAAAGTGAGAGGATGGAAAAATGTATTTCATGCAAATGGGAAGCAAAAGCTGGAGTAGCAATCCTCATATCAGACAAAACAGACCTTAAAATAAAGATTGAAAGAGATAAGGAAGGACACTATGTAATGATCGAGGATCAATCCAAGAGGAAGACGTAACAATTGTAAATATCTATGCACCCAACGTAGGAGCACCTCAATACATGACAAACACTAACAGACATAAAAGGAGAAATTGACAGGAACACAATAATAGCAGGAGACTTTAACACCCCACTCACACCAATGGACAGATCATCATAACAGAAAATTAATAGGGAAACACAAGTCTTAAATGATACATTAGATGAGATGACTCTCATTGATATCTTCAGGACATTCCATCCAAATGCAGAAGAATACACCTTCTTCTCAAGTGCGCATGGAACATTCTCCAGGATAGACCACATCTTGGGTCACAAATCAAACCTCAGTAAATTTAAGAAAATTGAAATTGTATCAAGCATCTTCTCTGACCACAATGCCATGAGACTAGATATCAATTACAAGAAAAAAACTGTAAGAAACACAAACACATGGAGAGTAAACAATGTATTTCTAAACAACCAACAGCTTACTGAAGAAATCAAAAGTGAAATCAAAAATTTTCTAGAAACAAATGACAATGAAAACATGACAACTCAAAACCTATGGAATGCAGCAAAAGCAGTTCTAAAGGAGAGTTGATAGCAATACAATCCTACCTCAAGAAACAAGAAAAACATTGAATAGACCACCTAAATTTACACCTAAAACAACTGTAAAAAGAACAAAAAACCCCCAAAATTAGTAGATGGAAAGAAATCATAAAGATCTGAGCAGAAATAAATGAAAAAGAAACAAAACAATAGTAAAGACTAATAAAACTAAAAGCTGATTCTTTGAGAAGATAAACAAAATTGACAAACCTTTAGCCAGACTGATCAAGAAAAAAAGAAGAATCAAATCAACAAAATTAGAAATGAAAAAGGAGAGGTTACAACAGACAATGCAGAAATACAAAGGATTATAAAAGACTATTATGAACAACTATATGGCAATAAAATAGATAACCACAGATTCTTAGAAAAGTTCAATCTTTCAAGACTGAACCAGGAAGAAATAGAAAGTATAAACAACCCAATTACAAGCACTGAAATTGAACCTGTGTTCAAAAATCTCCCCAAAAACAAAACCCAAGGACCAGATGGCTTCACAGGAGAATTCTATTAAACATTTAGAGAGGGGCGAATGCCTATCCTTCTAAAACTCTTTCAAAAAACTGCAGAGGAAGGAAAACTTCCAAACTCATTCTATGAGGCCACCATCACCCTGATACCAAAATCAGACAAAGACAACACAAAAAAAGAAAACTACAGGCCTATCACTGACGAACTATCACTGATGAACATAGATGCAAAAATC TCONS_00149999 TCONS_00150000 TCONS_00150001 TCONS_00150002 TCONS_00150003 TCONS_00150004 TCONS_00150005 TCONS_00150006 TCONS_00150007 TCONS_00150008 TCONS_00150009 TCONS_00150010 TCONS_00150011 s 3' 64536 TCONS_00149999 TCONS_00150000 TCONS_00150001 TCONS_00150002 TCONS_00150003 TCONS_00150004 TCONS_00150005 TCONS_00150006 TCONS_00150007 TCONS_00150008 TCONS_00150009 TCONS_00150010 TCONS_00150011 s 3' 64536 EMBV3_34490 GGCAATTTAACGATGTCTCCAAAGGGACTGTGAATAATTGCCTTCCCTTGTCAGGGGCCC Gene GeneID:504492|SNAI1:NM_001112708:844_cdna Constitutive 1 NULL GeneID:504492 13 GENE SNAI1 NULL snail homolog 1 (Drosophila) EMBV3_09061 GAGGAGCAGCAACGCTTCTCTTACCTACAGCTAAAATACATCACAGAGAAAAATGAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28623 TGGACCGCAAGCAAGCTGGGCGGCGTTCCGAAACAGGAAAATGGCCTCACAGCTGAGGAT Variant GeneID:507032|PDCD2L:XM_002694924:3_cdna 143^370 3 EMBV3_24797 GeneID:507032 18 GENE PDCD2L NULL programmed cell death 2-like EMBV3_38612 GTGCTATGGCTCCTTCATTCACTCTTGCTACTTGTGGTCAGACTCCAGCGACCCACTGTT Gene GeneID:514871|LOC514871:XM_002699708:2_cdna Constitutive 0 NULL GeneID:514871 X GENE LOC514871 NULL similar to killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 1 EMBV3_27357 TCATCAGGGGCCATGTGCATCTCGGGACTGAAGATTGCCCAGCTGGCAGGCTGCAATCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41240 GGATCCATTGCAGCCCTCGACCGAGTGTTATGTCCAGGGTTTCTCAAAATGAAGTCAGAA Gene BVV0102_439937 + 0 NULL GK000017.2:6083642-6088752 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13188 AAGGCTTTCTTCAAAGGTGCCTGGTCCAACGTACTGAGAGGCATGGGCGGTGCTTTTGTA Gene GeneID:282478|SLC25A4:NM_174658:7_cdna Constitutive 0 NULL GeneID:282478 27 GENE SLC25A4 ANT1 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 EMBV3_27678 TGAGGGAATAATCTTTTTTGCCAGCGTGCTGAGGACAGCAGTCTCGTGTCAAGAGTTCCC Gene GeneID:525619|DKC1:NM_001105395:8_cdna Constitutive 1 NULL GeneID:525619 X GENE DKC1 NULL dyskeratosis congenita 1, dyskerin EMBV3_29973 GCAGCCAAGAATAAATAAGGGGTCGGCCTGAACTGGACTTCCGGTCACTGCTCTCATCAT Gene GeneID:617534|RSU1:NM_001040601:160_cdna Constitutive 1 NULL GeneID:617534 13 GENE RSU1 NULL ras suppressor protein 1 EMBV3_24787 TGAATACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATG Gene GeneID:521876|CHRNA9:XM_002688206:79_cdna Constitutive 0 NULL GeneID:521876 6 GENE CHRNA9 NULL cholinergic receptor, nicotinic, alpha 9 EMBV3_05992 GGCAGTGACCAAACCAGGATTAGGAAACGTCAGGGCCTTCACTACCTTCACAGATCTAAC Gene GeneID:508229|MYO19:NM_001024501:224_cdna Constitutive 0 NULL GeneID:508229 19 GENE MYO19 MYOHD1 myosin XIX EMBV3_11210 CAAACTCTGTCCCTGCCCAGTTTGGGGTTCACAGTGTCTCATTTGGTGGCATCTTACTGG Gene GeneID:505622|LOC505622:XM_002698078:77_cdna Constitutive 0 NULL GeneID:505622 25 GENE LOC505622 NULL similar to UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like 3 EMBV3_38119 AGCTCGATTCTGGAGACATTGGCTGGTGTCAGATATCAAGGGCTCCGACATGAAGATAGG Gene GeneID:513254|PEBP4:NM_001034440:76_cdna Constitutive 2 NULL GeneID:513254 8 GENE PEBP4 MGC127772 phosphatidylethanolamine-binding protein 4 EMBV3_24218 TCCCATGAGGAAGAACACATTGCTGTCTTTTGAAAATAACTTCAGCACCATCATGGCTTG Gene GeneID:531682|CAT:NM_001035386:48_cdna Constitutive 0 NULL GeneID:531682 15 GENE CAT MGC128112 catalase EMBV3_31230 GCCCTCTTGAGTCTGAGGTATGTGTGAGGGTCCATGGCAGCCTCTCTTACCTTGGTCTTT Gene BVT0102_034678 + 0 NULL GK000019.2:54543763-54546948 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097810 TCONS_00097811 1 XLOC_058339 Coding TCONS_00097811 XLOC_058339 Coding Coding LOC536606 19:54545542-54552502 j TSS72382 2078 1 TCONS_00097811_1 212 4 0.701968673660009 0.00746866541538314 0.00483709308680168 0.00739843224822417 0.00383903538141816 0.00355303839464873 0.00116765059862245 0.00167105194555506 0.00217763196210438 0.00378105641061649 1.10943974303402e-05 2.94855497692337e-05 9.96782582078839e-16 0.00042114070905595 0.000363564682466001 0.000829665404669318 4.71773739329417e-10 0 0 0.00281254432750885 0.00327078554728196 0.00072148583491077 0 0 1.73157139554261e-12 0.00613804670046223 0.00326902890306523 0.00293827811210725 7.61286972596988e-15 1.06860229490205e-10 1.73597062118364e-05 XM_005195839.1 TMEM235 PREDICTED: Bos taurus transmembrane protein 235 (TMEM235), mRNA. 0.0 1723 99.79 0.462463907603465 NM_001204210.1 TMEM235 Homo sapiens transmembrane protein 235 (TMEM235), transcript 0.0 715 83.09 0.323387872954764 TCONS_00097811_1 sp|A6NFC5|TM235_HUMAN TM235_HUMAN Transmembrane protein 235; 8e-84 253 80.23 0.811320754716981 2 coding 1 1 1 0 -1.00934022142029 0.00881959517787099 -0.321784847698805 0.00312654531513553 TCCGCTGGGCTCTGGTCCTGGTATCCTGACCGCATGTCGCGGCTGGGTGCACTGCTCCTGGCTGCTGCCTTGGGCGCGCTGCTCAGCTTTGCGCTGCTGGCGGCCGCCGTGGCCAGCGACTACTGGTACCTCCTGGAGGTGGCGGACGCCGGCAACCACAGCGGCCACGGGCAGCTCTCCTCCCACTCGGGGCTCTGGCGCATCTGCGAAGGGCACAACAGCTGCATCCCCCTGATCGACCCTTTTGCCAGTGAGAGCCTGGACGCCTCTACTTCGGTGCAGCACCTCATCTCGCTGCACCGAGCCGTCTTGGTGGTCCTGCCTGTGAGCCTCGTCCTCATTGTGTGTGGCTGGATCTGTGGCCTCCTCAGCTCCCTGGCCCAGAGCATCCGTCTGCTGCTCTTCACTGGCTGCTACTTCTTGCTGGGGGGCGCCCTGACCCTGGCTGGGGTCATCATCTACATCAGCTACTCACAGCTGGCCTTTGCGGAGACGGCCCGCCAGTACGGCCCCCAGCACATGCAGGACGTCCGCATCAGCTTCGGCTGGTCCCTGGCCCTGGCCTGGGGCTCCTGCGCTGCGGAGTCACTCAGCGGCGCCCTCCTGCTCACAGCGGCCCGAGGCCTCAGCCTGGGCGGGCAGCCGGGCGCCCCCCACTCTGTGGTCATCTGAGTCCCAGGCAGGCAGGTTGGGGGAGAGAGGCTCCATTTCCCTTTGCACCTCCTGGGGTTTGGGGTGGCCGAGGCTGAGAGGCCGTGGGAAGGAGGCTAGGAGCCCTGTTCTGACTGTTCTGCTGGGCTGGAGTCCTGGCTGGGAGTGGGCCCTAGGGTGCGTGCAGGGTTGGGGGTGCAGGGTAGAGCTGAGAGTCCAGGCTCCTGTTGCTTGATGTTCGGGGGGCTCCCCTGCCCATTGTGCCTTCAGGGACTAATTGGTTTGGCCTCTTCTTAGAGGTGAGAAAGGCAAGACCCAGAAAGTGGGAGCAAAGGGACCAGGGACGGCTGTGGTGGTAGTGGGGGCGGGGCGCTGCAGGCTCTTGGCTGTTCAGCGGGTCCCCTTGCTTCTCGAGGCTGTGGCCTGTGCCCGCCCCTCCCCACCCGTCCTGGTGGGCCACAGCTGGCCCCAGTCCTAGGGACCTGCGTCAGGCGGAAAAGCTGCCCCAGTCCTTGGAGGGGGCAGTTCAAGGGAGAAGCCGATATCCGTCAAACACTCTATGCCAGGCCCTCACCAGGCCTTCCATGCCATGTTCTGTCCTCCCCCCACCCCTCCCCAGGGCAGCTGTTGGTGGGGAGGAGACTGAGGACTGGGGGGCCTCTTGGATTTCCAGGTGCAGGGAGGGCAGAGGGGGTTGGGCATATCTCCGCCCCCTTGTTTTCAGGTCTCTTCCTTGTCCTGGGGCAGGTGCTCCGGGACCCCACCCTCATCTATAGTTCCCAGAGGGATATCTGTGATCCCATGTGGGCCCCTGGGCAAGCAGGTGTGGAAGTCCTGTGGGGTGGGGGAGCCATGCCAGGATGGAGAGTGAGGGGCTTCTCTACCAGGTGGGGCGGCTGCCCGGGGCAACAGAGGCCAGAGCCTGGAGTTTTGGCTGCAGGCTTGTTGAATGGAGGCAGACCCAGACCCAGTGTGCCTCTAAGGGCCAGACAGACAGGAAGGTGGGTGGCCTGCCCTTGACACGTGGGTGTCATCGTGGTCTGTGAAGGCTGAGGCTGCTTCCACTCTGGGCAGGACCTGGAGACCTACTCAGCGTTTGTTTCAGGCTCAGGGCCCTCTTGAGTCTGAGGTATGTGTGAGGGTCCATGGCAGCCTCTCTTACCTTGGTCTTTCCCCTTCCCCAGTCTCCCTTTATGGCTGGAGGCAGGGTGGTTACAGGAAGCTCAGGACCATCAGGGGCTGGTACCATCTGGGGAGTCCCCCTGAGGGACAAAGAGCGGGGACGGGGGTGGGAAGGGGGTGTTCAATGCGGGCTTCCCTTCCTACCTGTGTTTTAGCGTTTAACATTGTGCCAATGTGTCCATAAATAAATCAGCTTGTTCTGTGTGCGGTTAAACCTTTATTCACTTCAGATAACACATGCCCAT EMBV3_39687 CCAAGGAAGACAAGTACCCCAATGACACTGGTTGCCCTGCTCCCCAACAGCGCTGCCGAC Variant GeneID:534569|CCBE1:XM_002697839:542_cdna 650^756 1 EMBV3_20267 GeneID:534569 24 GENE CCBE1 NULL collagen and calcium binding EGF domains 1 EMBV3_20364 GGATTTTCGCATGCAACTGGTACAACTCTGCTACAACCCTGACCACGAAAAGCTGAAGCC Gene GeneID:615507|GSTM3:NM_001046560:191_cdna Constitutive 0 NULL GeneID:615507 3 GENE GSTM3 MGC137020 glutathione S-transferase mu 3 (brain) EMBV3_36123 TGGAAATGTGTCTGTGGAATATGGGGGTGTGAGTGTGTTGCGAAAGTGTATGTGAATATG Gene GeneID:512310|NDFIP2:XM_002691904:18_cdna UTR3_Alt 3 NULL GeneID:512310 12 GENE NDFIP2 NULL Nedd4 family interacting protein 2 EMBV3_10469 ATCATCGCGGTTCTGTGCTACTGCCGGCTCCAGTACTACTGCTGCAAGAAAGACGAGTCG Gene GeneID:615192|LOC615192:XM_002691665:418_cdna Constitutive 0 NULL GeneID:615192 11 GENE LOC615192 NULL hypothetical LOC615192 EMBV3_34517 CAGTGTATTCAGTTGGACAAGAAACACAGTGAGTGGCCAGAGCTTCTAGAGTCAGAGGTC Gene GeneID:526223|LOC526223:XM_002699898:139_cdna Constitutive 0 NULL GeneID:526223 X GENE LOC526223 NULL similar to Zinc finger CCHC domain-containing protein 16 (Mammalian retrotransposon-derived protein 4) EMBV3_16746 GTGCGGGGCCTTCCCCCAACAACTCAGCCCGTAATGGTTTCTAAGCAGGAATGTTCATTA Gene BVT0102_069879 + 0 NULL GK000001.2:129292282-129389225 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005218 1 XLOC_001205 Coding TCONS_00005218 XLOC_001205 Coding Coding CLSTN2 1:129384582-130110707 = TSS2583 9790 1 TCONS_00005218_10 955 0.103370786516854 17 0.986540866298318 9.76638329411927e-05 0.000224235515537796 0.000253867753619107 0.000271829638465207 9.432651207457e-05 1.51785217607697e-05 0.000236774463973527 5.03503278609548e-05 9.82923795612204e-05 0 4.93319129353826e-07 1.9065702884275e-59 1.42976214888839e-05 8.46547418845386e-05 4.99006302299659e-322 6.10981990409002e-05 0 0.000205032771602219 3.13092540270111e-05 9.64133327454995e-05 1.44310836783787e-05 0 1.30183407617897e-06 0.000120025328515321 0.000344654901003672 9.1959327954407e-05 4.70731214363438e-05 2.94147292672854e-79 2.71488987870616e-06 1.61736364125255e-06 XM_005201877.1 CLSTN2 PREDICTED: Bos taurus calsyntenin 2 (CLSTN2), transcript variant 0.0 8134 99.87 0.461491317671093 NM_022131.2 CLSTN2 Homo sapiens calsyntenin 2 (CLSTN2), mRNA. 0.0 4412 85.39 0.396220633299285 TCONS_00005218_10 sp|Q9H4D0|CSTN2_HUMAN CSTN2_HUMAN Calsyntenin-2; 0.0 1795 92.78 0.998952879581152 0 coding 0 0 0 0 -0.0464066855106782 0.742470181824783 0.0115617651308259 0.848648601363614 GGGAACTAGCCAAATGGTCTTAGAAAGCTCAATAGAATGACAGTAGGTCAGTAAAGTAAGTTTATTTATTAGAAAATGAAGGGGAAGCAGATATATAATTGGATGGAGCATGAAGTTGTTGTTTAGTCACTAAGTTGTGTCAGACTCTTTTGTGACCCCACGGACTGTAGCCTGCTAGGCCCCTCTGAACATGAGATTTCCCAGGCAAGAATACTGGAGTTGTTTGCCATTCTCTTCTCCAGGTGAGCTTCTCCACCCAGGGATAGAACTGGCGTCTCCTGCGCTAGCAGGCGGATTCTTTACCACTGAGCCAACCTGGGAAGCCCTGGGTGTAGCATAAATGGAAGAAAATGAGACACGTCTATATTTTTCCTCTATTTGCTGGCCTCCCTGATTTTGCTTGGGTCAGCTTTTCCTTCTTCTGCACGCCATTCTTTCTGGATTCCGACACCAAGTCTGGAAAGGGCAAGAACCTAGTGTGGGCCTGAGGGATTTTTTAGCCCTTTGACCTTGGACAAGGAAGTTTGCTCCATTTACTCCTGTATGAAAGGAGAGTAACAGCACAGACATGGGTTGTGCAGGTTAAAGGAGATGTGCAGGTGAAGCACCCTTCCTGGGTTGAGGCTTTCTGTAGCCAGTGTGATTCATGGCTGCACTCCAAGCACCTCTCAGTGCCTGGAAATGCAGAAGAGTCCACCCGCACAATGGCAGTAGCTCTGGGTGAGCTGCCAGGCTGGGTGCAGAGTGACTGAACAGCAGGAGAGCTGTTAATGGATTTTATGGCTTTGTTGAGTACCCCAAACTACAGTTATTAATTATAGGATGCTGTTTAGACACCGTTGCAGCATATACATTTTGTTAATTGATTTGTATAGGCTCATATCTAGCAACATAATGTGCCTACCACAAAGCATAGTAATTGCCTTTTACTGCCTTTTTTGGCTTCTCACAGGAACAAAGACTTTAAAGAGAGGACAGACAACTCTCCTGGGTCTTTGGATGGTCTAATGTCTAATTTAGTGTCCAGTGGCAGGGTGACATTACCTGTCTAGGTGCTCAGTAAAAGGGATGAATCAATGAATAAATAACTTTTGGTTCTCTCTGGATTTCTCTACGTCCTTATTTGAACCCTGACTTGTGTGTGATATTGGCACTGCACACATGTATGCGAATATGGTCAAGGATTTATTGTGAGCCATTAATTAGTGTTTATGGAGTACCTCTTTGAAACCTCTGTGGCCTGGGGTTGGGGAGGGTCGTCAGGAGTGCATGGCCCTTGCACTCTGGGATCTGACAATTACGAGGTGTTACCAAGCATGACGTCAGGTGGCCAGGTCTTAAGATACGTGCAGTGAAACAGAAAGGTGGTAACTTCTTGCCTTGCCACCATACTGCAGCGAAGTTTCTGTCCCACTGTAGCCTCGGCAGGCCCAGCGCCCCAAGTCTGCCTTCTGTGATCTGGTCCATCAGCCTCCAGGAGCCTTGGCTGTCCCTGCATCTCCAAGATGGTGCGGACTCCGGCCACTGCCCTTCCGGTCCGCGGTGATGCACACGGCCCCGCAACTCCGACCAGCGCTCGCAGCACTCGCGCTCTCCAACTCTAGCGTGGGCCGGGCGCCCTCCCCAGACCAGGCGGCATAGAACGTCCAGAGTTCCGGCCACGGGCAGGACTGGCAGCAACGCCCCCGCTTCTCTTGGAGCGGATGTCAGCTTCAAGGGCGTGGCGGGGCCCGGCGCCCTGAGTCCCCGCGGGCGACGCTCAGGCTCCCGGGAACCACTTCTGAGGGAGCCAGTCATCCCTTTAGGCAGTTATTTGCGAGCCGGAGCGAGAAGGGTGCACGGCCAGAGGGCTCCCCGCAGCCGCCCACCTGGCCCTCTGGGAGCCGAGTCCTGCCTGGAGCAGGAAAACTGGAGCTGGAGCGCCCCGAGAGCTCGAGGACGGCGGGCAAAGTTGGGGGCCGGGGCCGCGGAGCCGCGAGCTCACGGCCGCTGCCGGTGTCCGCGCCTCATGAATATGCAGGAGCCGCCTCCCCCCGTCCGTGACGTCACGGGCCGTCCCGGGGTGAGCGCCGGAGCCGCTCCAGGTCCGTGCCAGTGAGCGCGGCTGCTGCCGGCGGGCTAGCGGCGCGGCGGTGGACACCGGAGACCGAGCGCGGCGGCTCCCAAAGCGCACCCAGCGGCAGGGCGAGGCGGCCCGCGGCCCGGCGCGCACCGGGAGGGGAGAGTCGGTGCGGGGAATAGGCGGCGGCGGCAGCTCTGAGGCGGCGGCGGCGGCGAGGATGCTGACTGGAAGGCTGTGCTGGGTGCCGCTCCTGCTGGCGCTGGGCGTGGGGAGCGGCAGCGGCGGCGGGGAGAGCGGGCGGCGCCGCCTCCTCGCGGCTAAAGTGAACAAGCACAAACCATGGATTGAGACTTCGTATCATGGAGTCATAACAGAGAACAATGACACAGTCATTTTGGACCCACCATTGGTCGCCCTGGATAAAGATGCACCAGTTCCTTTTGCAGGAGAAATCTGTGCATTCAAGATACATGGCCAGGAGTTGCCCTTTGAGGCTGTGGTACTCAACAAGACATCTGGAGAAGGCCGGCTCCGTGCCAAGAGCCCCATTGACTGTGAGCTGCAGAAGGAGTACACGTTCATCATCCAGGCCTATGACTGTGGCACGGGGCCCCGGGAGACAGCCTGGAAGAAATCTCACAAGGCCGTGGTCCATATCCAGGTGAAGGACGTCAATGAGTTTGCTCCCACCTTCAAAGAGCCGGCCTACAAGGCTATCGTGACGGAGGGCAAGATCTATGACAGCATCCTGCAAGTGGAGGCCATCGACGAAGACTGCTCCCCCCAGTACAGCCAGATTTGCAACTATGAAATCGTCACAACTGATGTGCCTTTTGCCATCGACAGGAATGGCAACGTCAGAAACACGGAGAAGCTGAGCTATGACAAGCAGCACCAGTATGAGATCCTGGTAACCGCCTATGACTGTGGACAGAAGCCCGCAGCCCAGGACACCCTGGTGCAGGTGGACGTGAAGCCAGTTTGCAAGCCTGGCTGGCAAGACTGGACCAAGAGGATTGAGTACCAGCCTGGCTCAGGGAGCGTGCCCCTGTTCCCCAGCATCCACCTGGAGACGTGCGATGGGGCCGTGTCCTCCATCCAGATCACCACGGAGCTGCAGACCAACTACATTGGGAAGGGCTGTGACCGGGAGACCTACTCTGAGAAGTCCCTTCAGAAATTATGTGGAGCTTCCTCTGGCATCATTGACCTCTTGCCATCCCCCAGTGCTGCCACCAACTGGACCATAGGACTGCTGGTGGATAGCAGTGAAATGATCTTCAAGTTCGATGGCAGGCAGGGTGCCAAGATCCCTGATGGAGTTGTGCCCAAGAACCTGACCGACCAGTTCACCATCACCATGTGGATGAAGCATGGCCCCAGCCCTGGCGTGAGAGCTGAGAAGGAAACCATCCTCTGCAACTCAGATAAAACCGAAATGAACCGGCATCACTACGCCCTGTATGTGCACAACTGCCGCCTCGTCTTCCTCTTGCGCAAGGATTTTGACCAGGCAGACACCTTCCGCCCAGCAGAGTTCCACTGGAAGCTGGACCAGATTTGTGACAAAGAATGGCATTACTATGTCATCAATGTGGAGTTTCCTGTGGTCACCTTATACATGGATGGAGCAACGTATGAACCATACCTGGTGACTAACGATTGGCCCATTCATCCATCTCACATTGCCATGCAACTGACAGTCGGCGCTTGTTGGCAAGGAGGAGAAGTCACCAAGCCACGATTTGCTCAATTCTTCCACGGCAGCCTGGCCAGTCTCACCATTCGCCCTGGCAAAATGGACAGTCAGAAGGTGATTTCCTGCCTGCAGGCCTGCAAGGAAGGGCTGGATATCAATTCCCTGGAAAGCCTGGGCCAAGGAATAAAGTATCATTTCAACCCCTCGCAGTCCGTCCTGGTAATGGAAGGTGATGACATCGGGAATATCAACCGTGCCCTCCAGAAGGTCTCCTACATCAACTCCAGGCAGTTCCCAACTGCGGGTGTGCGGCGCCTGAAAGTCTCTTCCAAAGTCCAGTGCTTTGGAGAAGATGTGTGTATCAGCATCCCCGACATAGATGCCTACGTGATGGTGCTGCAGGCGGTCGAGCCCCAGATCACCCTCCATGGCACAGACCGCTTCTGGAGACCCGCCGCCCAGTTTGAAAGTGCCAGAGGGGTGATTCTCTTCCCTGACATCAAGATTGTGAGCACCTTCACCAAAGCTGAGGCTCCCAGTGACTTGAAGACCACAGCCCCCAAATCAGCAGTTTTAGAAGAAATGCTTCACAACTTAGATTTCTGTGACATTTTAGTGCTGGGAGGGGACTTGGACCCCAGACAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAGCGACACCTGGACGCCACCAACTCCACAGCAGGTTACTCCATCTACGGTGTGGGCTCCATGAGCCGCTACGAGCAGGTGCTGCGTCACATCCGTTACCGCAACTGGCATCCGGCTGCCCTGGAGTCCCGGCACTTCAGGATCAAGTGCTCAGAACTCAACGGGCGCTACACCAGCAATGAGTTCAACCTGGAGGTCAGCGTCCTCCATGAGGTCAGAGTCCCGGACAGTGAGCACGTCAACCACCTTATCGCGCAGCCACCATTCCTCCAGTCCGTCCACCACCCGGAGTCCCAGACTAGCATCCAGCACAGTTCAGCGGTCCCAAGCATTGCCACAGTGGTCATCATCATCTCCGTGTGCATGCTAGTGTTTGTCGTGGCCATGGGCGTGTACCGGGTCCGGATCGCCCACCAGCACTTCATCCAAGAGACTGAGGCTGCCAAGGAAGCAGAGATGGACTGGGACGATTCTGCACTCACTATCACGGTCAACCCCATGGAGAAACACGGAGCCCCAGGGCGTGGGGAAGAGGAGACCGAGGAAGAGGAGGAGGAGGAAGCGGAGGAAGACAGCTCCAGCAGCAGCGAGTCCGAGGGCAGCGAAGAGGAGGAGGAGGAGGAGGAAGGGGCGGGCAGGGGCAGACACGGGCAGAGTGGAGCCAGGCAAGCCCAGCTGGAGTGGGACGACTCCACCCTCCCCTACTAGTTCCCCGGGGCCACGCCCACCCACCTGTCCGTTTTGTAAGCCCTGCCCCGATGTACACCCCAGCCTATCACATGTCGCCTCTGATTTCCATGATGGTCCCGGCAGGCCTTCCCCAACATTCTGGAACCCATGTTTTACGCCCTGGGCACAGCTCGTGTCCCAGTCCTGGGGCAGTTTCCAGAAGCCCAGCGTCATCCTCAGTGGGGATTTTGCGGTGAACTTTTTCCTGTGGCCCCCACTTCTCTGGCCCTGGGCTCACCCAGCATTCTGTTAACCAAATCTGTGGGTTCTTTCTGTTTGGTCCTCCCTGTAGGGGAGAAGATCAGCCTTTATGTTGCTCCCCAACTGGGGCTCCGCGTCCCCAGGGCTCTTAGGTTCCAACCCACTGTGCGAGCACGGACTCCATGTTCTCTCCAAACAGTCTGGCAGGTTCTCCTCACCTGACTCTCTAGGCTGCTTCCTACAGGCAGGGTGGTCAGACTACACACACGGGAGGTCTAAGTCCTCTGCACATCAAAGGAACATCCTTACCCAGGTGGAATTAAGTTTGCAGGACAGGTTGGCTTGGGCTCCCCTCACCCCCACACACATCCACTCTCTCATTTTGGAGAGCCTTTTCCTTTGTTCTTCTTGAGGCCATAGAAGCTTATATGAAAAGTCCAAAACCAAGAATAGGTCCTTGGCCACAGCAGGGCCTGGTTCCCGCCAAAGCGCTCTGAGAACCTGCCTTGCTGGCAGCCACTGAGACCTGCAGGGCTGCCCTACTGGCAGCTCCAACCACAGGACACCATGGAGGCCAGAAAGCATTCCACACAGCTACTGCCCCCAGCAGCAACTGAGACAAGCCTACAGCTGGGGAGCAGAAAGAAGGGCTGAGGAGATGGTACGACTGGGCTGCATGGTGGACACAGAGCTGGGTGACGAGGGTGGCTGGGCCCTCCCAGGCCAGAAGGTGGCCCGGAAGTGGACAAGGCTCTCACCGTCTAGTCTTAGGGTCCCTCATCCCCTAGTTCACAGTTCTGCCTCTTGAGAAGATACATTCCTCTTGGATGTATTGGAACAAGCATGGACTGCTTTGAGTCTAAAACAAGAGTTTGGAGATTAAACTGCTAGGAATTAGAAGCATGTTTGCCGTAATAACAGCTTCTTTTTTCTTCTCAGAAAGGGAGCAGTGCTTTAGGTGGATGGCAGATATATCCAAAAACCTAGTTTCTTTCTTTCTGCTTTTTTTAAATAAGAAAATCTTTTCCATCTCCATCTTAACGTGGACACTTTTGGAGGAGAGTTGTTGCTATAGTAACTGGTCTGTGATCTTTTGTGGCCAAGAAGATAGCAGGCAAGAACTAGAGCTGTTACAGGACTTCCACGAGGCTCTGCGAATGTCTTTGTTTCAAATGTCTTGGGCTTTTTGTCCTTAGTATGTATGATCTATCGCCGAACTCTCCCCACACCCATCCCCCAACCATCTCATATTGGCTTGGCACAGCAGTAGAGCTGGTCCACAGGCACAGGGCATTCAGGATCAAAAGAAAGTTCAGAATCTATTCACTCTACTTGCTGTGTTACCAACTCAGAGAGAACTTATGAAGGGGGACCACCATCAGTGTCCTTTAGTGACAGGTCTTTCTGATTCGAGGAAACCTTCTGATTTGAGGGAACCACCTTAGGCGGCTTTTTCCATCACCTAGAGTGATTTTTGCATCTCTTCTCTCCATCAAGCCTCCAAGTATCCCATGAGGTAGAGGGGACATCTATTATTAGACCCATTTTCATGTTGAGTAAACTGAGCTTCAGAGATTCAGCATCTTGCTCAGAGTTTTTCTGACGCATCAACTAGATGGGACTCCCCACCATCCACTCCTTGCCTAGGGCCTGCCACTCTGATTCTACTTATTTGTGTTCATGAACTAAGAGGCATTGCTGGGAATCTGCTGTGTGCTAAGCGCTCTACCAGCAGCTGTGGGAAAGGAAGAAAGCAGACAATAAACCCCTCCTCCCCTTAGAGGACTTGATAGCTGCAGAGGAGAAATAGGCATAGAAATCACGTAAGAGACAAATGCAGAGGGAGAGGGAGAAGTCACAGGAAGAAGAGGGACTCATTCGCAAATTCAACCCATGCTCTCATTTTTCCCTTCTTAGAAGCACCGGCAGAAGTTTGGGGTTTTCTATTCATTGAATGGAAATAGACGCTTCTGTGAATTTCCCCAATAGCCCTTTTCTATCAGGCTGGGTCTATGCATCTACTAGAAGAAAATCTCGGGTTTTTACTCCTTACAATCCCCTTAGTTAAATAAAGAGATCCTTTAATTGGGCCTTCAGGAGCTAACAGAATTCTTGCAAAATTATAACAGTAAAATGAATACTGTATGGATATGTTTAAAGCCAATTCCTTTGGAATTGGATTTTTGTTTAAAATATTTAATTCTGGTGTTCAGGAGGTGCTTGCTTCTGCTAGGTCTTTTGGTTTGGCTGGGGTGGGGAAGGTGGTCCCCATGCCCTCCACTGCCTCCAATGGCTACCTCACTTATTTATGGCTGAGTGAGCTGTTTGGGGCACATGAAACCATTATACGTTTGGGGGCTTTGGGAGGGACGGGAGCAGGTGAAAATGGCACTTGGCCAGGGCAGCTCAGCCGATTCACTTGTGACAGGACTCATATGTAGAGAAACAGCGGGGTCAAGTCAGAGCCCTTTCTGTCTACTCCCACTGTGGGAGATCAGCCTGCATTGCCAGCGCTGAGAATGAGGCCCTTGAGATGATGCTGCTGGATCTGTGAGCATGTATAGTGTTCCCAGTGCCGAACTCAGCACCACAGGTGAGAACAAGAAGGGGCAATTATATAAAAGTAACAGAAGCTTCAGGGAGTATCCAGGTGAGCGGTGAGTAACATAACTTGCCATCCCCCAAGGATTCTAACCACAGGTGGAAAATGCCATTCATCAGCCCAGCGTTTTCCAGTCTCCATCTGCTGGCATCTGGGAATCCAAACTCCCAGATGGCTGGATACCCTGTGGCCTCTCACCCAGGCAGCAGCAGCAGCAGATGTCCATCTGGACAGGGAGGAACAGCTGACCAGTTTGTCCACAGGACAGACTTTTGCTCATCTTGCCAAGCAGATGATCAGATCCTGCTCTCTGAAGGTTGAAAACACATAGGCTGAAAACTCAGGTGACAAGAAGAGAAGGAAGAGGTTAATGGAAAAGGCTAGTACAGAATGAGTTGCCCTAGTGGAGTAAAGCAATCAACTAGTTGGCCACCTGCGTTAAATAATACTAAGTACACTCTAATAAGTTTCATCAAGTGCTATAAATCTGAGGCCTCAGTTCATCTAGTTACCAAAAATGTGATTTCAGTGGGTTCTGCTTTCACCACCTCTGTCTTAAATATATACAACTATTCTATCAAGCAGGGCTTAGCCCACACAGCTCTGCTTGTAGTATGGGCTGTGGCTTGGCAGACGTGGACCCTGCAGGGAGATGGACTCCTGGAAGGGAAGTAATGTATCCTGTTCTTATACATATGGCAGGATTGGCAAGCTTCACCTGGAAGGAGCCAGTTGGTAGATATTTTGGATTTTTCAGGCCATAAGGTCTCTGTCACAAGTATTCTACCCTGCCATGGTAGCATGAACCAGCCACAGACAATACACTTAAATGGATGAATATGGCTATATTAAAAAAAAAAAAAAAACTATTTATGAACACTAAAAAAAATCAGGCAATTTGAATTCATATTATTGTCAGATGTCACAAAAATTATTACTTGTTTGACTTCTATTTTCCAGTACTTAAAAACAGAAATAACTTTCTGAGTCCATCAGGTCAGTTCAGTCGCTCAGTCATGTCTGACTCTTTGCGATCCCATGAACCGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTTACTCAAACTCATGTTCATTGAGTCAGTGATGCCATCTAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAATCTTTCCCAACATCAGGGTCTTTTCAAATGAGTCAGCTCTTCGTATCAGGTGGCCAAAATATTGGAGTTTCAGCTTCAATATCAGTCCTTCCAATGAACACTCAGGACTGATTTCCTTTAGGATGGACTGGTTAGATCTCCTTGCATGGTCCTTACAAAAACTAGCAGCTGGCCAGATTCGGCCCAGGGGCCACAATTTGCACACCTCAACTGTGTGTGTGTGGGAAGCAGCCTTCCAGCCTTTCATTTGCCAAGAAAAAGCAGGTATCTTAGGCCCTCCCATAAACTGCTCAGGGGTCTTTGCCTCCAAAATGAACAGCAAACAATGCATAGTCCTTAACTAAACTGTTTTTAAAATCCATGTTCCAGAGGGAAAACAAAAACCAAAACCAGAAAATAACTTGTTACTTGTTGAATTGACTCAAGCTCAGGCAAGCATTTGTCAAGAGCCAAAAGCCTGGGATCCAGGAACCCACTGACCACTGAGCTAAGTGCTGGCTCCCAGGTGCGGGGCCTTCCCCCAACAACTCAGCCCGTAATGGTTTCTAAGCAGGAATGTTCATTATCTCAGACTGATTTCCATTCAGCCCTGCTCATGCCATTGCTATAAAAATGATCTTAAAGACTTGTGACTGTTTAAATCAATACAG EMBV3_17392 TACAGCTAGGGAAACAGTGTTGTGCGCATTCACCCGCTCAGTGTTAAGTGACAGGATGAG Gene GeneID:539404|IREB2:XM_002696666:286_cdna UTR3_Alt 2 NULL GeneID:539404 21 GENE IREB2 NULL iron-responsive element binding protein 2 EMBV3_29908 CTGACTTCAGGCCTTCCACTCCAGGAAACTTTATTCAGCCAACAGCTCGAGGGAACTTGC Gene BVT0102_257660 + 0 NULL GK000006.2:43085396-43436209 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205011 TCONS_00205013 TCONS_00205014 TCONS_00204999 TCONS_00205005 TCONS_00205006 TCONS_00204996 TCONS_00205004 TCONS_00205001 TCONS_00205016 TCONS_00205008 TCONS_00205000 TCONS_00205012 TCONS_00205017 TCONS_00205015 TCONS_00205002 TCONS_00205018 1 XLOC_124565 Coding TCONS_00205015 XLOC_124565 NonCoding Coding - 6:43251763-43287845 - TSS153205 335 0.662686567164179 2 0.990770765777002 0.0039300922905707 0.000732664875383894 0.000645854346514337 0.00404559407765848 3.47811847364654e-07 0.000747384225119375 0.00165732155521153 0.00195318924811063 0.00059217792698297 2.77750096390439e-35 3.9810446832068e-23 0.000143385924060086 0.000524585824904925 0.00146004518461168 0.00260639087051321 0 0 0 0.000615285373137266 0.0062202171807371 0.00591457242846786 0 0 0 0.00462554373460084 0.00423004814882315 0.00309084405216255 1.43590837650951e-05 5.4493266364191e-05 0 0 noncoding 0 0 0 0 -0.529121772247731 0.027121605003818 -0.0594392786402573 0.346320862806021 ACGAAGAAGCTGAGGAGAAGGGCGGTAGGAGCCGAGTCGGAGAGCTGTGAGCTTGACTAAAGTGTGCTGAGCTGTGGCTGGCCGGGAGACAAGGGGGCCTGAGTAAGGCCTCCAGGAGCTCAGGGTGATACTCAACTGCCAGCCAGCAGGAAACCTGACTTCAGGCCTTCCACTCCAGGAAACTTTATTCAGCCAACAGCTCGAGGGAACTTGCGAACAGATTCTTCCAGGGCCTTCTGACTAGAACCCAGGCTGGCTGACGCCTTGGATCTGGCTTAAAACCTGCAGCAGAGACCAGTCAAGCTGACCCGGACTCTTCACCTACAGAATGGGGC TCONS_00205019 s 3' 172294 TCONS_00205019 s 3' 136216 EMBV3_39754 GCTGTTTCAGGAACATGTGTATATTCAGAAACTTATCTCCTCATATTCGGAATTGGGAGG Gene GeneID:512869|RNF213:XM_002707766:305_cdna Constitutive 2 NULL GeneID:512869 19 GENE RNF213 NULL ring finger protein 213 EMBV3_39148 ATATTGTATTTTACAAAGCTTCAGGGAATTTTTCATTCAAATTGGCATGCCCTGTTTGCC Gene GeneID:540528|NR1H4:NM_001034708:34_cdna Constitutive 2 NULL GeneID:540528 5 GENE NR1H4 MGC127466 nuclear receptor subfamily 1, group H, member 4 EMBV3_24950 CCCTGAGCTCCCCATCAAGATGTGAACCAGAGTCCTGTGATCCTGAAGCTTCCCAAATGA Variant GeneID:510377|SP140:NM_001075447:88_cdna 753^836 1 EMBV3_07837 GeneID:510377 2 GENE SP140 MGC140309 SP140L SP140 nuclear body protein EMBV3_06675 CCGCGGGTTGAGCGGGAGGCGCGCGGAATTAACTTTGGTCAAGTGGTGGCCGATGTGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19401 AACCAAAATGCCTGGAACAACCTGGAAAAGTACAGCCGCAGTCTGACCCGCACCTACCAA Gene GeneID:327707|ENDOG:NM_175823:7_cdna Constitutive 0 NULL GeneID:327707 11 GENE ENDOG NULL endonuclease G EMBV3_31550 CCCCTTTGTAATGCTTATTCATGCTCCTGTCTGTCATCCTCACCTTTTCCATCCCCAAGC Gene BVV0102_188165 - 1 EMBV3_12097 GK000005.2:31738309-31775732 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07692 CTGTGTTCCTACAGATGTTCGGGGAGAAACTTAAAGGAGCAGATCCCGAGGAGACCATTC Gene GeneID:505519|MYL2:NM_001035025:54_cdna Constitutive 0 NULL GeneID:505519 17 GENE MYL2 MGC128326 myosin, light chain 2, regulatory, cardiac, slow EMBV3_33961 CTGGCTAAGTTGTCCATCGTCCCTGTGCGAAGAGGCACTGGCATCGTCTCCGCCCCTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20317 CTTGATTCAGTAGGAGCTTCCACAAGTTTCAGCAGGGCTCACCTCAGCAGGGTTACTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19705 AACAGAGTTCATGTTCTTTGGTGGAACGAGAGTGCAGACAGCCGTGCAGCTGGGAGACAT Gene GeneID:534363|NIPSNAP3A:NM_001080298:24_cdna UTR3_Alt 3 NULL GeneID:534363 8 GENE NIPSNAP3A MGC140274 nipsnap homolog 3A (C. elegans) EMBV3_22413 TTCCCAAACTGCCTTATCGCTAGGGTGGCCATGTGTCTCATTATGCCTTTCCTCTCAAGC Gene GeneID:515980|ISG20L2:NM_001046217:147_cdna Constitutive 0 NULL GeneID:515980 3 GENE ISG20L2 MGC134339 interferon stimulated exonuclease gene 20kDa-like 2 EMBV3_04634 CCCTGGTACTCCTCTCCCTACTGGTAACCACTAGTTTGTTCTTCTATTTAAAAGTCTCTG Gene BVT0102_231970 + 1 EMBV3_32473 GK000001.2:53368941-53528681 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000637 TCONS_00003308 TCONS_00003305 TCONS_00000642 TCONS_00000638 TCONS_00000628 TCONS_00000647 TCONS_00000648 TCONS_00003306 TCONS_00003304 TCONS_00000624 TCONS_00000620 TCONS_00000621 TCONS_00000632 TCONS_00000625 TCONS_00003307 2 XLOC_000165 XLOC_000831 Coding TCONS_00003305 XLOC_000831 Coding Coding MYH15 1:53523011-53623902 j TSS1705 5929 1 TCONS_00003305_5 1276 0.112497891718671 26 0.94149073248092 0.000427351160896387 0.00100903762956895 0.00155402290797947 0.000612394131212755 0.000284952168417567 0.000474249603219866 0.000473730187225515 0.000633968793474228 0.00153866373910634 0.000115969021874983 3.61556528335349e-05 7.8415411937039e-05 0.000231123955298412 0.000313380920013497 0.000668870075059096 2.43098536074058e-05 1.64628743938368e-252 1.14064104381803e-81 0.00170055260203573 0.000630822318818539 1.85294161141585e-09 3.36023170076862e-45 7.19170767436692e-05 1.89294197886125e-42 0.000466218872128941 0.000933747398093194 7.89070797322273e-05 1.16057315226726e-05 1.97887594919082e-05 2.22557056554696e-12 XM_002684737.3 MYH15 PREDICTED: Bos taurus myosin, heavy chain 15 (MYH15), mRNA. 0.0 6919 100.00 0.646820711755777 NM_014981.1 MYH15 Homo sapiens myosin, heavy chain 15 (MYH15), mRNA. 0.0 4405 84.94 0.662168999831337 TCONS_00003305_5 sp|Q9Y2K3|MYH15_HUMAN MYH15_HUMAN Myosin-15; 0.0 1906 78.84 0.999216300940439 3 coding 1 0 1 1 -0.0773120510174077 0.651388211688385 0.0243610132040521 0.71941365450797 CTTCCCCTCCCCTGCTTGGCTTCCCTCCTTCTCCAGATAAATCTCTTGAACCAGAAGCTCCACCTCAGATTCTGCTTCCAGATGAAGATAAAATTTTTACAGACAGAATACTTGAGAAACAATTTCTTTCTTCAAGTTATTTTATTGCCCTTCCATAAATTATTGTTACCAAATTGCTACCAAACAGGTAGATATGATTCACAACAGAACAGTTAGATAAATATTGACTTGTCATAGGAAGAAAATAATGTATTTTGGAAAACCTAAATAAATTAATGACTAAGCTGAAATCAACTGCACCTCATTTTGTGAGATGCATAAATCCCAATGTGAACAAAACACCAGGTGTAATGGACCCTTATTTGGTTCTACAGCAGCTGCGCTGTAATGGTGTCTTAGAAGGGATCACGATATGCCGTGAAGGTTTTCCACACCGACTGCTGTATGCTGATTTTAAGCAAAGGTACTACATTCTGAACCCAAGGGTGTTTCCAAAGAGCAAATTTGCAAGCAACAGAAAAGCAGCTGAAGAATTACTTGACTCCTTAGAGATAGACCATACCCAGTACCGCTTTGGAATCACTAAGGTGCTTTTAAAAGATGGCTCTCTGAGCAAACTGGAAGCCATGAGAGATGAGAGATTATCAAAAGTCTTCACATTGTTCCAAGCCAGAGTACGGGGAAAACTGATGCAAATCAAATTCCAAAGGATTCTGGAAGAGAGGGATGCACTTCTTTTGATCCAGTGGAACATAAGAGCTTTCATAGCTGTGAAGAGCTGGCCTTGGATGAGGCTCTTCTTCGAGATCAAGCCTCTTGTTAGATCTGCTGGAATGGGAAAGGAGGGAGCTGGACTGAAGGAAGAGTGTATGCAGCTGCAAAAAGCCTTGGAGAAGTCAGAATCTCAGAGGGAGGAGCTGAAATCAAAGCAAGTCTCCCTCCTCCAGGAAAAGAATGATCTGCTTCTTCAGCTGCAGGCTGAGCGAGAGACCCTGGCAAATGTTGAAGAGCAGTGCGAGCTGCTGATTAAATCCAAGATCCAGCTGGAGGCCAGCGTCAAGGCGCTGTCTGCGCGGGTGGAGGAAGAAGAGGAGATAAATTCCAAGCTGACTGCCAGGGGGCAGAAACTTGAAGATGAATGTTCTGAGTTGAAGAAAGAAATCGATGACCTGGAAACACTATTGGCGAAGTCACAGAAGGAGAAGCATGCTACAGAGCTCAAGGTCAAGAACCTGCTTGAGGAGGTGGAGTCTCTCAATGAGGATGTGAGCAAACTGCATCGAGCAGCCAGGGCTGCACAGGAGACCCACCAGCAGACCCTGGAGGACTTGCGCAACGAGGAGGAGAAAGTCCACACCCTAAGCAAGGCCAAGTTGACGCTGGAGCAGCGAGTGAATGAGCTTGAGGGTGCCCTTGAGCAGGAGAGCAAAGCAAGAATGAACTGTGAGAAGGAAAAGTGCAAAGTGGAGGGCGAGTTAAAGCTGAACCAGGAGAGCATGGACGACCTGGAGAGCAGGCAACTGCAACTAGCAGAAAAGCTGAGGAGGAAAGAATTAGAAATGAATCAGATGAGGTCGAAGGTGGAGAATGAGAAAAGCCTGGTGGCTCAGCTTCAGAAGACGGTTAAAGAGTTCCAGACTCAGATACAACTTTTGAAAGAAGAATTGGAAGCTGAAAGGACCACTCGAGCCAAGGTAGAGAGGGAGAGAGCTAACCTCATCCGAGAGCTGGAAGACATGAATGAGAGGCTGGAGGAGGCAGGAGGTGTCAGTTCGGCTCAGCTGGAGATAACTAAGAAACAAGAAACAAAATTCCAGAAGCTCCGCCGAGACCTGGAAGAGGCCACACTGCACTTTGAGGCAACCTCTGCCTCTTTGAAGAAGAGACACGCAGATAGCCTGGCTGAGCTGGAGAGCCAGGTAGAAAATTTACAACAGGTCAAGCAGACACTGGAAAAAGACAAGAGTGACCTAGAGCTCGAAGTGAACGATCTCCTGATCCATGTTGAACAGATGACCAGAGCTAAGGCTAATGCTGAGAAGCTTTGTAGTCTGTATGAGGAACGCTTGAAAGAAGCAAATGCAAAACTGGATGAAGTGACTCAATTAGCAAATGACGTGACAGCGCAGAAGACAAAGCTACGGAGTGAGAATGGTGAGTTACGGAAAAGGCTGGAAGAAATGGAAGCTCTGATAAACCAACTTTCCAGGGAAAAGAGTATCTTCACTCTGCAGATTCAAGACCTGAAAGGGCAACTGGCAGAAGAAACCAAATCACAGAGTGCCCTGGCCCAGGCCGTGAAGTCGGCCAAGCGTGATTGTGACCTTCTACGAGAGCAGTACGAGGAAGAGCAAGCAGCCAAGGCTGAGCTGCTGCAGGCCCTGCTCAAAGGCAATGCTGAAATGGTGAAGTGGAGGACCAAGTACGAGGATGACACCATCCAGCGTGCTGAGGACTTGGAGGATGCCAAGAAGAAGCTGGCACTTCGGTTGCAGGAGGCTGCGGAAGCCATGGGGGTGGCCAATGCCAGAAACGCCTCCCTGGAGAGGGCCAGGCTCCGACTGCAGCTTGAGCTCGGGGACACCCTGTCTGATCTCGGGCAGGCGCGGTCTGCGGCTGCCGCACTCAACCAGAAGCAGCAGCATTTTGACAAGAGCCTGGACGACTGGAGGCGGAAGCACGAGGAGTCCCAGGCGATGCTGGATGCCGCAAAAAAGGAGGCCCGCGCCCTCAGCATCCAGCTCCTGGAGCTCAGGCACAGCTACGAGGAGGGCACCATGAGCCAGGAGGCCCTGCGGAGGGAGAATAAGCACCTGAAAGAGGAGATTTCTAATCTGACAAATCAGGTGAGAGAAGGAAAGAAGAACTTAAGTAAAATGGAAAAGGTCAAGAAACAGATTGAACAAGAAAAGAATGAAGTTCAGATGGCATTGGAAGAGGCTGAGGGAGCTCTGGAGCGTAATGAAAGCAAGGTTCTTCGTTTGCAGCTTGAACTCTCAGACACTAAAGCGGAACTTGAAAGGAAGCTTTCAGAGAAAGATGAAGAAATAGAAAATTTTAGGAAGAAGCAGCAGTGTGCTATTGACTCCCTGCAGTCGAGTCTGGATTCCGAAGCTCGTTGCAGAATTGAGGCCACCCGGCTGAAGAGGAGTATGGAAGGGGACCTCACTGAGATGGAGCTCCAGCTTAGCTGTGCCAGCAGGCAGGCATCAGAGGCCACCAAGTCCCTGGGCCAGCTCCAGACCCAGGTCAAGGACCTGCAGGTGCAGGTGGATGACAGCACATGCATGAACAGCGAGCTGAAGGAGCAGGTGGCGGTGGCCGAGCGGCGCAATGCTCTTCTCCAGGCTGAAGTCGAGGAGCTAAGGTCCTTGCAGGAGCAGACAGAGCGCAGTCGCAGGCTGGCAGAGGAGGAGCTCCTGGAAGCCACGGAAAAAATCAATCTTTTCCATGCCCAGAACACGAGTCTCCTCAGCCAGAAGAAGAAACTGGAGGTGGATGTAGCCAGGATGCAGAAGGAAGCTGAGGAGGCGATGCAGGGCTGTCAAAATGCAGAAGAGAAGGCCAAGAAGGCAGCCACTGAGGTAGCAAACATGTCAGAAGCACTGAAGAAGGAGCAAGATACCAATGCCCACTTGGAGAGGATGAGAAAGAACATGGAGCAGACAATTAAAGACTTACAAGAAAGGCTGGATGATGCTGAGCAGACAGCCATAGTGGGGAACAGAAAGCAAATCCAGAAACTAGAATCCAGGGTTCGTGAACTGGAGGCTGAACTGGAGAGCGAAGTCCAACGTAACTCGGAGGCCCAGAGGGGAGCCCACAGGCTTGAACGGTGCCTCAAGGAGCTGACCCATCAGGTAGAGGAAGATAAGAAAAATATGAGCAGGATGCAGACTCTGATGGATAATCTTCAGCTAAAAGTACAAAGTTACAAGCAGCAAATCGAGTCAGCAGAAGCAGAAGCAAGTCAATACCGTTCCAAGTATAAGAAGCAGCAACATGAGTTGAATGAAGCTAAGGAAAGAGCAGAGATAGCCGAATCTCAAGTTAATAAACTCAAGATGAAAGCAAAAGAGTTTGGGAAAAAGGTCCATGAAGAATGAGCCATCCTCATTTATAAAGGATAGAGGCTGGAAAAATACAAGGAGGTACTATTTTCTGACCAGAAACTTAAGTTGCATTTGAAGTATACACCTTTAGATTGATGCACAGCTGCTTTACAATGTTATATTAGTTTCAAGTGTAATAACATAGTGCTTCAATATTTGTAGGTTATACTCCAGTTAAAATGACTATAAAATACTGCTTATATCCTCTCTGGTGCACATTGCATTCTTGTGTCTTATATATTTTGTACCTGGTGCTTTGTACCTTTTAATCCTCTTTCCCTCCCTGGTACTCCTCTCCCTACTGGTAACCACTAGTTTGTTCTTCTATTTAAAAGTCTCTGTTTTGATATATCCACTCATTTGGGAAACATTTTAAAAAATATGCTGCATCAAAAGTAGTTTAAACAAGGTGATCAGGAAACGTAATAATAAAAGGAAATATTGTTGCTTTCAAGGGTAGTGGGGAATTTTTTGATCCTCAGATATAAGTAAACATTTCACATGAAAGATTAAATAGATTCAAGAATCTTTTAAATTTTGATGTTTAAAAAAATACTTTGTTCATATTGCATCTTAATGAGTAATATTCATAGATGACATGAGCTATGTTATGGTCCCTGGGGAGTTCTGCTTGACTCATTTCTACATCCATGAGTCTATTTTTAGCCACTGACGGTGGGAGACAACAGGCTAGTCTTAGTGTTCTACAGTGATTTACCTATAGTCATAGTTAGGTAGGAGGGTTTTCCTGACACAAAGCATGTATGCTACATGCTGGGGCAACACTGAAGCACCCTCCCACACGAGATGCTCAGTTTAGCGATAACTGGTATGCTGTCTGTATTGTACCAATGTGGCTAAGCTGGAGGTACGTTTCCTAGAATTCCCTTCTCTCTGTGGTTCTGGATTACAGTTGGTCACAAAAGAAAAATGCACCCGATTTGAGAGGCAGAAGTGAGGGAGAAGATATTGTTTTTATGCTCATACAGTCAATGTATGGTCCCAGTACAGTGATAGCTGGCAGATATTCCTCAAGGCTGAAAGGGTGAGCTAGCTGGGATGGGCCGCAGCTCCTGTCAGAGTCCTCACCAGGCAGGCCTGTGGCTCCATGGCAGTAGGCGCTGGCCTGTCTTACAGGTCACTCCCAGCATAGACTCTAGAGGCTCCAAGAGACAGCATGGGATCCAGTTTGTTCTTATAAATTCCAGCTCATCCTCACTCCATGTCCAGCTCTCCTTCCTGACACTGGCACGTCTGCCCAACAGCGACCTCAGGGACAGCACCAGATGTGGAGGGGGCAGGCTGGCGCAGACTTCTTCACCGCTGCCCACGGTGGTACAGTGTTGAACGTCTATGACAAATCCTTGTTCTGTCATTCTCAGCACTCTGCCTCTCCGATCCAACCTGACTCTAAGATTAAGCTCAGCAGTGTTGAAAGACACAGGGTCCTTCTTATCTGCCATCCTCAATGTGCTGGCTTTGGTCTTTAAATTTGTCACCCTCATCACAGTAAGATTCAGTTCTGAGCATATTCTCCTCACCAAGTGCCCTATGTCCTTTTCTACAGATTTTCTTTATGCGTCCTTAGTACTCTACAATTTGTGATGGACACTGGTCACAACACTGCAGCACATACCTGAAGTCAACAAAACTCTGTGCAAAACAGACTGTGAATGAGTCCGCTGATACAGAAAACTGGACCAAGTGGCATTAACACACAACTGGGCTCGAGGGGCCACCGACAGCAACAAAACTGCCGATACAACGGCCACCAAAACTGGAACAATTATCCCAGCAGGCGCTCTTGGGCTTGCTTC EMBV3_17564 GACAGAGGAGCCTAGCAGGCTTGATATTTTGGCTGTAACAACTAGGTAAGTAGTGCTGAG Gene BVV0102_329441 - 1 EMBV3_15210 GK000014.2:57524005-57784158 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23632 ATGCAGAAGATCTGGCGAAGAAGCCAAATGACCACTGCCAGAGTCAGCAGCTGGGCTTAT Gene GeneID:533361|LOC533361:XM_002686209:481_cdna Constitutive 0 NULL GeneID:533361 3 GENE LOC533361 NULL similar to CG31803 CG31803-PA EMBV3_37734 AAGGGTACCTTGGATAAATTACTGCACATGTCACTGCTGGGTCTCAGGGCTTGTAGATGT Gene BVT0101_055684 + 0 NULL GK000007.2:16244047-16248164 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219247 1 XLOC_132566 NonCoding TCONS_00219247 XLOC_132566 NonCoding NonCoding - 7:16245053-16246152 - TSS163245 1099 2 TCONS_00219247_2 43 0.575978161965423 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3.6551385449911e-05 2.56815314995484e-05 9.24733545756393e-06 0.000889198342787017 0 4.56613265908711e-05 0 0 2.76226221204811e-05 2.02566174046968e-05 0 0 0 0 0 0 0 1.09413061551048e-05 XM_005208764.1 KEAP1 PREDICTED: Bos taurus kelch-like ECH-associated protein 1 (KEAP1), 0.0 762 100.00 0.383075523202912 0 noncoding 0 0 0 0 0.0153902806386892 0.882325827664938 0.0348125916326489 0.578062723425114 ATTCGAACTCCGGCTCTGCCACTCTCTAGCTCTGCGCAGCTGGACCCATAATTTAACCGCTCCATGCTTCAATTTCCTTCCTCGTAAAATGTTAATAGGGCTTCTGTGGTGGCTCAACGGTAAAGAATCCTTCTGCAATACAGGGGACACAGGATCGATCCTTGGGTCGAAGAGATGCCCTGGAGAAGGAAATCGCAACCCACTCTAGTATCATTGCCGGGGAAATTTCATGGACTGAGGAGCCTAGTGGGCTATACAGTCCCTGGGGTCTTAAAGAGTTGGACACCACGTAGCAATAGATGTTAATAATACAGGCACCTACCTGGTAGATTATTGGGAGAACTAATTGAGAATGCTAGCGCTCAATAAATATGAATGATTGTTATTTTCCATGGAAAGTGATACTGATTTTCCATTTATGCTCTTTGTTATATAAAGTTAACTTTTAAATGTATGTGGGGTTTTTTTCTTTTAAGAGTCCATCTGTATGAAACGCTAGACTGAACAGATACTGGTCTAATAAAGGATTCCGCCTGCCCCTGGGGTGAATTTGGAAGATTCTGCCTCCCTGCTCTGGGTTTGGGATTAATCCCACGCAGGAGAAGGCTGGGGTGGGGTTCCTTGCTTCTCCTCCCTTGCCGGTGGCGGTGGTGAAGCTGTGGTTTGAGTGCCTCCAGAGGTGGCGCCATAGCATAATCGCCAAATACTGTATGGGGAGTGGCTGAGGCTGTGAGTAAACCCACACCCTTCTCCACATGCCAAAGGAAACCTCTGGTATATCTCAAAATTAACATCTACAAGCCCTGAGACCCAGCAGTGACATGTGCAGTAATTTATCCAAGGTACCCTTGCACACGTTTAGGAGGGTGTATGTACACAGATGTTTATTGCAATACTGTGTTTAAATGCCAAGTGTTGGATTTAACATGTGTGCATCCCTAGGGCCCTGGTGTAATCTATGCTGTGAAATACTATGCAGCCAGTAAAAAGAAGCCATTAGCTGTGTAAATGTTTTACCTCAATATTTTTAAATGTGAAAAAAAAAAAGCTCTGTAAAGCAATTATTCAATTAAAAAATAGTGACATAAAAAGTGTTATG TCONS_00215677 TCONS_00215678 . 5' 1008 TCONS_00215677 TCONS_00215678 . 5' 1008 EMBV3_10240 TAATGAAATTGACCACTACTTCTGTGAGGTCCCTGCGGTCCTGAAGCTGGCCTGTGCAGA Gene GeneID:614050|LOC614050:XM_002686444:445_cdna Constitutive 0 NULL GeneID:614050 3 GENE LOC614050 NULL similar to olfactory receptor Olr856 EMBV3_26410 TGGTTATTGTGTCAGCTTCTGGGACTGTAGAGACTGTGACCGAGAAGGAAGATGGTGCTG Gene GeneID:531278|TTC33:XM_002696355:16_cdna Constitutive 1 NULL GeneID:531278 20 GENE TTC33 NULL tetratricopeptide repeat domain 33 EMBV3_36758 ATCATGGCTTGGGTTTCTGCCTCACTTGGGCTCATCCCTGCTACTCATGGAAGGGTTGTT Gene GeneID:616620|ODF3L2:XM_002689136:110_cdna Constitutive 0 NULL GeneID:616620 7 GENE ODF3L2 NULL outer dense fiber of sperm tails 3-like 2 EMBV3_33828 ACTCATCTCCTTGCTTAAGAGCTTGTGAATTAGCTTGACAGAGTGCAGGGGGCTTCCTCC Gene GeneID:788170|LOC788170:XM_002695984:346_cdna Constitutive 0 NULL GeneID:788170 19 GENE LOC788170 NULL hypothetical LOC788170 EMBV3_26698 AAAAACACCAGACACAGTCATGCGTGCCTCCTCTCTACCTCACAGCCCAAAACAAGAGAC Gene BVT0102_051262 + 1 EMBV3_16553 GK000019.2:18582030-18604658 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36760 AGCCTCCCATCTTGGTTGGAAATAGAGGCTTTCCTTTGGCCAGGCCCACATGCCTGCCCT Gene BVT0102_299531 + 0 NULL GK000013.2:54430674-54471016 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049076 1 XLOC_029207 NonCoding TCONS_00049076 XLOC_029207 NonCoding NonCoding - 13:54432596-54433111 - TSS36252 515 1 0 0 0 7.18757066029176e-05 6.44983005826084e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00139639404939732 0 0 0 0 0 5.47221517195433e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.203475434120379 0.237258606612221 0.0286810406115147 0.723592889704416 GTTGGGTGCGGAGGAGCAGCATCCTTCTGGGGGCAGCCTCCCATCTTGGTTGGAAATAGAGGCTTTCCTTTGGCCAGGCCCACATGCCTGCCCTTGGCTCCCCCGGAGGAGCAGGAGGCTCAGAGTAGAGGGAGCAGCCAGAGACTAGATTCTAGGGGGCAGAGGTCAGCAGGCTGGAGCTGCTGACCCCGCCCCCAGGGCCCTTAACCTGTGTCTGGCCTGAGTCCTGACCCCCAGCCCAGCCCCCAGCCCACGGGAGCCCAAATGCCCCAGAACCACCAGCTTTGTTGAGACAGGAAGGCTCATGACAAGAAAGAAGCCCTCCTCCAGCTGTCTCCTCTCCAGGAGACCCCACTAGACTGGACCAGCTGTAGCCACAGTGACCTCTTGTGTCCCGGTTGCTCAGGGAAGGTAGAGTTGTGAACCTAGCAGTGTCCACCCAGCAGTGGCCCAGAGGCCACCCAGCAGTGTCCACCAGGCGACATCTGAGCATGCACTCTCCCCCACCCCCTCAG TCONS_00045569 . 5' 1924 TCONS_00045569 . 5' 1924 EMBV3_41911 CCTGGACTGCCAGATTCATAAGGTGGATGGCATTCAAGCTAAAGATGAAGCAGAAGGCTT Gene GeneID:521554|IL7R:XM_002696380:101_cdna Constitutive 0 NULL GeneID:521554 20 GENE IL7R NULL interleukin 7 receptor EMBV3_30668 TGAGAAGAAACTTAATCAGAATAGTAGGTCAGAGGCTCCTAACTGGGCAGCTCAGGACTC Gene GeneID:534165|EIF3E:NM_001034603:29_cdna Constitutive 0 NULL GeneID:534165 14 GENE EIF3E EIF3S6 MGC127040 eukaryotic translation initiation factor 3, subunit E EMBV3_35108 TTTCTTCACCCATTTGAAAAAAAAGGAAGGGGGGTGGGGAATCCAAAACAGAACGAGCTC Gene GeneID:784639|TMEM159:NM_001080361:22_cdna Constitutive 1 NULL GeneID:784639 25 GENE TMEM159 MGC128035 transmembrane protein 159 EMBV3_27731 TGAGCCTGCCAGTGAAACCTGGACAAGGAGACTCTTAGATCCTCAGACAAACACTGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03808 CGCCAAACTACAGGGGCACCTCTGGGCTTCCTGTTTCCCTCATTTTTCGGAATCTTTTCT Gene BVT0102_080878 - 0 NULL GK000027.2:23505184-23856776 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25141 CCTCTTAGAGGTAACATTCAAAGCCAGCTTGCAGTTTAATTCTGAATTGGTTCTGACTCA Gene GeneID:512938|UBD:XM_002697379:19_cdna Constitutive 0 NULL GeneID:512938 23 GENE UBD NULL ubiquitin D EMBV3_04363 GAGTTGGTTAGAAGCTGAGGGAACTGGAAGGAAAGTGCTCGGTGTTTTTAGGAACTGGGG Gene GeneID:100336105|LOC100336105:XM_002696000:394_cdna Constitutive 0 NULL GeneID:100336105 19 GENE LOC100336105 NULL proteasome activator subunit 3-like EMBV3_41134 GAACCAGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTATAAAAAAGCTGTGACCAAGGCC Gene GeneID:614378|LOC614378:XM_002692321:86_cdna Constitutive 0 NULL GeneID:614378 13 GENE LOC614378 NULL similar to histone cluster 1, H2bc EMBV3_28421 TGTTTAGGATTCGAGACCGAGACTCAGGGGAGAACGGAAAGATGACTTGCTCCATCCAGG Gene GeneID:787005|PCDHB15:XM_002689255:160_cdna Constitutive 0 NULL GeneID:787005 7 GENE PCDHB15 NULL protocadherin beta 15 EMBV3_22044 TGGGCTGTGCTCATTTCTCATTAACGATGCATGAAATTGATTGGCACTGCTGCCCACGGG Gene BVV0102_057417 + 0 NULL GK000030.2:146099081-146611849 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05392 ACAGGACTTGAAGCCCGTCCGCTCCCATGGAATCTGTGATACTGAGCCGGATTGGACTGA Gene GeneID:525071|MTP18:NM_001075863:65_cdna Constitutive 0 NULL GeneID:525071 17 GENE MTP18 MGC142509 mitochondrial protein 18 kDa EMBV3_40227 TGAGTACTACGTGAATGACCCTCCTCGAATCGTCCTGGACAAGCTGGAGCGCAGGGGCTT Gene GeneID:617650|GCHFR:NM_001114526:199_cdna Constitutive 0 NULL GeneID:617650 10 GENE GCHFR MGC134487 GTP cyclohydrolase I feedback regulator EMBV3_33844 CGCTCCGCAACAAGAGACGCCACTGCAATGCGAAGCCCCACGGAAACTAAAGACGTTGCT Gene BVV0102_201378 + 0 NULL GK000018.2:53466228-53501994 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13830 TGTGTAGGTAACTCAGAGAGAGACAGCCCCACACACATCCCGCAAGGCATCCTAACTCAT Gene GeneID:504701|SGTA:NM_001038030:8_cdna Constitutive 2 NULL GeneID:504701 7 GENE SGTA MGC134165 small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha EMBV3_31355 GAAACATGGATTCTTGATTGGGATCGGCTGAGGTACAGCAAAAATTGCAGCCCCGGGAGC Gene GeneID:528533|CDK5R2:XM_002685576:165_cdna Constitutive 0 NULL GeneID:528533 2 GENE CDK5R2 NULL cyclin-dependent kinase 5, regulatory subunit 2 (p39) EMBV3_27162 AGAGGTACAGAAGAGTTGTGACCTGACTTCCTAATCCTGTGAGTTGTGGGCACCTGTGTG Gene BVT0102_381207 + 1 EMBV3_20687 GK000011.2:21761349-21988494 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32276 CTGATCATGAGCTGGCCTCAGACTGTTCCTGTGCTTGCCTCTCATAGCTGATCTCTTGTT Gene GeneID:785216|GSTO1:XM_002698470:506_cdna Constitutive 0 NULL GeneID:785216 26 GENE GSTO1 NULL glutathione S-transferase omega 1 EMBV3_17853 TTTACAGAAAGTCCGGTGAGCCTGCCTGGCTTTATCAAATGCTCACTGGAGGGGCTACTT Gene BVV0102_036270 - 1 EMBV3_37871 GK000024.2:41437427-41532521 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142689 1 XLOC_087114 NonCoding TCONS_00142689 XLOC_087114 NonCoding NonCoding - 24:41524084-41525486 - TSS106900 1402 1 TCONS_00142689_1 127 0.0549215406562054 1 0 0.000504633092528929 0 0 0 0 5.10279223960488e-06 0 0 0 0 0 0 2.04656527206836e-06 9.05904668481592e-05 0 0.00154475475608791 0.000461831115053308 0.00016106838310358 0 0 2.16528758544992e-06 0.000338746562725295 0.000163588598710201 0.000418518963149849 0 0 7.52244272304917e-05 0 0 0 0 noncoding 0 0 0 0 -0.0535964217142617 0.717810821669604 0.022201262848238 0.6333145227679 CCTTGGCTTGATAAGTGTTTATTTGTGGGAAGTTCAGAAAAGGATGATGACTTCTGGTCTGACCCAGACTGTGAGAACACTTTGAGAAAGTCAACTAAACCCCCTTCTATCTCTGCCTCTGAGTCGCGTTTCCCTCCCACGGATCAGATCACTTATCGAGCACCTACTGTGCGCGGGCGCTGTGGTACCCATGGGGGCCTCAGTGGTGAGGAGGACAGTCTCTGTCCAGATTGAGGGGTGGGGAAGAGGGGTCCTGGGGATGCCCAAGGGCGACTAGGGCAACGTGGAGATGTGTGCAGACCATCTGGGGAGCGCAGGGAAAGCCCCCTAGTCTGGGTGGAGTGGGGGCTGGTCAAGGCCTTCCTCCACGCTGGAATGTTGTAGAGATAAGTTCATTCCTTGAGTTCCTTAGAAAAGCAAGTGAACGTGCGGCACTGGGTGAGGTGTAGCTGACGTTGCCTCACCTGAATGCCCCCACCTGAGCAGGTGGCTCACAGGGTCCTTCTGGGCGCACTGTTGAGTCTCATCTCCACAGACTCCGCACAGATCCTGTTCCGCCGGCCTCACCCTGTCCAACTGCAGAGTCTGGAAAAGACCACCCGCCTTGTGCAGGTGCTGCTGACCCAGGAGGGTCACTCAGGTGATGCCCCCAGCCGACCTCAGACTGGAAGTAGCCCCTCCAGTGAGCATTTGATAAAGCCAGGCAGGCTCACCGGACTTTCTGTAAAGAAGCATAGCAGAAACCCTGAGGGATTTGAGATAATAAGCCTATTTTATCAAATTACAACTGAACAAAATGTTGGTTTTGTTGTTGTCGTATTACTGATCAAACCAGAAGTTGTTTTGGTTTAAAAGACACACAGAACTCACCAGGGTATGAAACTGAAAAGACTTTTAATAATTGACCTATTTAGTGAAAATTGTCCAGGTGCAATATTACTTTCAAATGGGATTTCATATTCATGGAATTGAGTTAGTCTGATGTGGCTAGCATGGTTTGTCAGATAAAGCTTTTCGAAGTTTGAGAAACAGGAGAAAAAAAAAAAACTGGTTGGCTGTAGAAATTCACAAGTCTCTAAATACCATGTCGACCTGTGTTTCTTATATAACTGTTGGAAGCTCGCTGTTAATTTTGTTTGGATCAAAATGTTTTTACCAGGCAGCACCCCTTACCCCACTCCCAGCAACTTACATTTCTAGAAAAGCACTCTAAAAAACCTAGGCTCTTGATTTTAGCTTTTCCATGAACTAGTCTGTGACTTTGGATAAGTAATTTATTTTGTCTTTGTGTGTAAACAGTTACATTCTGTTAGTGGCAGCTACAGTTTCTTGAGCACATACATTGTACTAGCAAAAATACACTCTTTCTAAACCTCACAACAATCCTGAAAGTTTCCCCATT TCONS_00138998 . 5' 7035 TCONS_00138998 . 5' 7035 EMBV3_01663 GAAGGCCAAGGCCCAGGAACTGGTGACCTTTGAGGATGTGGCTGTGTACTTCATCCGGAA Gene GeneID:618141|ZNF3:NM_001046614:329_cdna UTR3_Alt 2 NULL GeneID:618141 25 GENE ZNF3 MGC128512 zinc finger protein 3 EMBV3_06376 GGAATTTTTAGAGCCGGATAGCTGGGAGACCAGCTCATCTACAAAGTGTCTCTCTATTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32488 TGGACATGGAACCACAGATGTTTTCAACTGCATGGAAGGGTCAGTTCCCCTAACTCCTAT Gene GeneID:508904|DPH5:NM_001076821:65_cdna UTR3_Alt 3 NULL GeneID:508904 3 GENE DPH5 CGI-30 DPH5 homolog (S. cerevisiae) EMBV3_28966 TCTGAACAGCCCCTTCAGAACTACCTGGATCCAACCACAACCGCTTCAACCCTCAAGACT Variant GeneID:414350|PGA5:NM_001001600:40_cdna 158^275 1 EMBV3_42606 GeneID:414350 29 GENE PGA5 pga pepsinogen 5, group I (pepsinogen A) EMBV3_30334 GACATACAAGTGCTTTTGCAGACTGATGGCTAAGACGAGTCCATGTTACAGAGCCTGCCC Gene GeneID:540050|HSPA12A:XM_002698534:198_cdna UTR3_Alt 2 NULL GeneID:540050 26 GENE HSPA12A NULL heat shock 70kDa protein 12A EMBV3_43086 AGGAACCAGAAACCAAGGCACGTGTCCACTCAGGCCCCATCAACAAAACTCAGGTGCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10084 AACCCCATGCATTCCTGAAATAGACGATTCTGAGTTTTGTGTCCGTGTCCCTGGAGGAGG Gene GeneID:533993|PSMG2:NM_001046365:146_cdna Constitutive 1 NULL GeneID:533993 24 GENE PSMG2 MGC133742 proteasome (prosome, macropain) assembly chaperone 2 EMBV3_14488 CTACCATGCTTTATTTGAAAATGCTATTGCAATTATCAGAGAACTTTGAAGTTTCAAAAC Gene GeneID:288380|NDUFS1:NM_174820:17_cdna Constitutive 2 NULL GeneID:288380 2 GENE NDUFS1 MGC140590 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) EMBV3_24848 GTGCAAAGGCACAGAGGTTTATAAAAAAGTAGGTGGCTGGTAAGCGCGTGGAGGAATCTG Gene GeneID:515298|NUDT15:XM_002691831:528_cdna Constitutive 0 NULL GeneID:515298 12 GENE NUDT15 NULL nudix (nucleoside diphosphate linked moiety X)-type motif 15 EMBV3_42853 GGAAAGGCAGGGAAATTTATGGGTTCCTCTTCTCCCCAGTGATTCTATTAAGGTGTTCTT Gene GeneID:540095|LCORL:XM_002688147:12_cdna UTR3_Alt 2 NULL GeneID:540095 6 GENE LCORL NULL ligand dependent nuclear receptor corepressor-like EMBV3_03889 GATGATTTGGGCCTCCTGAACTTCACAACCAGAGAAGAGGAAGCCAAAGGGCTTGAGCAA Gene BVV0102_166005 + 0 NULL GK000025.2:34906640-34930216 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41514 TGCTGGTAGCGATCCCCTGTGTCTACAGCACATTTGTGTCTCTTCTCGTCACCGTAAAAT Gene GeneID:785944|LOC785944:XM_002693656:251_cdna Constitutive 0 NULL GeneID:785944 15 GENE LOC785944 NULL similar to cOR8V11 olfactory receptor family 8 subfamily V-like EMBV3_21758 TTCTAGGAATATGTCCCACCACACACGCTCTGCTGCCGGTGTGCCAAGATCTGAAGACAA Gene BVV0102_144771 + 0 NULL GK000002.2:126494835-126499326 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103805 1 XLOC_062216 Coding TCONS_00103805 XLOC_062216 Coding Coding CD164L2 2:126490779-126498811 j TSS77008 1144 1 TCONS_00103805_1 182 0.097027972027972 6 0.858299091022289 1.30679306404717e-79 1.51710790918756e-05 0.000435972580090576 1.23127019388732e-05 0.000132388163476494 7.53180357152988e-116 3.12544240982298e-65 0.000630255827613473 2.71864606392899e-05 7.47212556788545e-133 0 5.39689535422322e-29 2.57840040337962e-55 8.29447654977888e-91 6.45969819399445e-06 0 0 0 0.000285448721013292 0.00102396354273727 3.75051692382306e-06 0 0 0 8.72975938346691e-06 7.14413834684899e-91 3.65100172042531e-05 8.65601313488103e-24 2.04917887376882e-36 1.36513019837577e-34 NM_001076180.1 CD164L2 Bos taurus CD164 sialomucin-like 2 (CD164L2), mRNA. 0.0 733 99.04 0.363636363636364 NM_207397.2 CD164L2 Homo sapiens CD164 sialomucin-like 2 (CD164L2), mRNA. 2e-143 513 86.85 0.369755244755245 TCONS_00103805_1 sp|Q6UWJ8|C16L2_HUMAN C16L2_HUMAN CD164 sialomucin-like 2 protein; 4e-63 196 88.80 0.681318681318681 1 coding 0 0 0 0 -0.0688421055565964 0.604006729826558 0.000515601589249987 0.991420919951765 TCTGGGCCACGCCCACCTACCCTAGCGCAGGTTGCCCTGGTCTCGTTACTTACACCCCGGCGGAGCCGAATCCAGAGGGGCCACGCCACACCCGCTCTCCGCCGACCCCGACACCCCCCCCCCCAGGCCCCGCCTCCGAGCCCATGGCCGCGCCGGGACCCCGCGCCTTACGGGCTGCGCTCTGTGGCGGCTGCTGCTGCCTCCTCCTGTGTGCCCAGCTTGCTGTGGCTGGTAAAGGTGCTCGAGGCTTTGGGCGGGGAGCCCTGCTCCGTGTGAACATCTGGCCAGCTGTCCGAGTGGCCTGCAAACAGCTGAAGCCCTGTGAACATTGTGTGGAGGGGAACCGAGCACACAACCTCTCCAGCTGTGTGTGGGAGCAGTGTCGGCCAGAGGAGCCAGGACACTGCGTGGCCCAATCAGAGGTGGTCAAGGAAGGTTGCTCCATCTACAACCGCTCAGAGTCATGTCCAGCTGTGCACCACCACCCAACTCATGAACCGAAGACAGTCACAACAGGCAAAGACAGCACCTACCAGACACTCATCATGATAAACGGGCTTGTCTTCAGATCTTGGCACACCGGCAGCAGAGCGTGTGTGGTGGGACATATTCCTAGAACTGGAATTGGAGCTTCTCAGCGTTCATCTCATGGATCCATCCTGTCTGGCAAGCTTGGCCTCCACCTTCCTTGACACTTTCATGAACCTGGTCTTCTCTGCCCCCACAAGAACTGGGCCTGGTATAGAGAAGGCCCTCAGAGAGGGTTTGATGAATGAATGAATGACCAACGTTTTCCTCTCCTCTGTCACCAGAGGTCCCTCTCCAGCTCAGACCTCACCCCTCACATCTGGACCAAGGCTGCTGCCTCTTCCTCACTGGCCTCCACGCTTGCCCTGCATGGTCTGCCCATGTGATGGCCTGTATTACCAGCTGTTTTCTAGCCTCTGCCAGGGATTCCTCAGTGGACCTGAGGGCGGGCATGAAGTCACCTTGCTAACAATGCTTCTCTCTGGTTGGGGACATGGTTAGGGGCTTGGGCAAAATCTCTGGCAGAGAGAACACAAATCATGTCCTGTCTCTGAGCCTGTTTCTCCTTGTTTATTCACTTATTTAACAAACATTAATGGAGCACCTGCTATGTACC EMBV3_04933 CGCTGGAGGCGGCTGTGGCGGCCGCGACTGGTGCTCTGTAACAGAGCCAGACTGATTTCC Variant GeneID:521533|MMADHC:NM_001034541:94_cdna 53^112 3 EMBV3_29013 GeneID:521533 2 GENE MMADHC C2H2ORF25 MGC127500 methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria EMBV3_13096 TGTCACTTTATCCGTCCACTGGGGCCTGCGCACCCCAACACCCAGAAAAGCATCCCTGAT Gene BVV0102_320542 + 1 EMBV3_40881 GK000005.2:121047267-121056749 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42392 GTTCCAGGCCTATGATTTTAGACAGCACTATAGACCCTCTCCAGGAATCCAGTTCCACGG Gene GeneID:654488|OAS1:NM_001040606:291_cdna Constitutive 0 NULL GeneID:654488 17 GENE OAS1 NULL 2',5'-oligoadenylate synthetase 1, 40/46kDa EMBV3_23944 GCGTCTCATTTTCCAGAACCACAAAATGGTTTACAGGGACAGTAAGTTCATCGGTCTGGG Gene GeneID:100296192|LOC100296192:XM_002685676:463_cdna Constitutive 0 NULL GeneID:100296192 2 GENE LOC100296192 NULL similar to nuclear antigen Sp100 EMBV3_41438 GTAGCCTGTTGGATTTATAGTACCAGAGTATTACAACAGGGCATGTTTTAGTGTGTGTGC Gene GeneID:783855|TIFA:NM_001081621:89_cdna Constitutive 0 NULL GeneID:783855 6 GENE TIFA MGC143170 TRAF-interacting protein with forkhead-associated domain EMBV3_05479 CATGGCAGCAGTATCCATGATATCCAAAGAACGCAAACACCCACCAACTGATGAATGGAC Gene GeneID:530264|LOC530264:XM_002694682:256_cdna Constitutive 0 NULL GeneID:530264 17 GENE LOC530264 NULL similar to Uncharacterized protein C14orf166B homolog EMBV3_08351 CTGGATCCCGAAGATACTGTGTTTTATGTTGGGGGCGTGCCATCAAACTTCAAGCTCCCT Gene GeneID:100337052|LOC100337052:XM_002690105:2_cdna Constitutive 0 NULL GeneID:100337052 9 GENE LOC100337052 NULL laminin alpha 4-like EMBV3_24949 AGTGGCAGCAACTATGTCCTGTCTTCTGGAGCCTGTGGGGAGTTTTCCAGGCCGATCCTT Gene BVV0102_377917 + 0 NULL GK000022.2:51094555-51104194 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131402 1 XLOC_080107 NonCoding TCONS_00131402 XLOC_080107 NonCoding NonCoding - 22:51097465-51097670 - TSS98269 205 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0001403205902287 0.00140680245389426 0 0 0 0 0 0 0 0 0 XM_601010.5 BSN PREDICTED: Bos taurus bassoon (presynaptic cytomatrix protein) (BSN), mRNA. 2e-101 370 100.00 0.995121951219512 NM_003458.3 BSN Homo sapiens bassoon presynaptic cytomatrix protein (BSN), mRNA. 2e-32 141 82.52 0.68780487804878 0 noncoding 0 0 0 0 0.151393826592897 0.201876837500776 0.0180486153882994 0.710118721795115 GCGGGGAGGGGGCACGAGGGCAAGGGAGGGGCCAACAGGCCAGGGCCTTGTTGCCATGGCAAAGGATCGGCCTGGAAAACTCCCCACAGGCTCCAGAAGACAGGACATAGTTGCTGCCACTGCTGCCTCTCACCATGGGCCCTGAGACCACAGTCTCTTCCCAAGGACTAAGCGATGGTGGGGCAGGGGTTGTCGCTGTGAATGC TCONS_00128988 TCONS_00128989 TCONS_00128990 TCONS_00128991 . 5' 2912 TCONS_00128988 TCONS_00128989 TCONS_00128990 TCONS_00128991 . 5' 2912 EMBV3_01659 TGAGGATTATGCTTCGAGGAAGAACATGTCTGTGGCCGAGGTTGAGAAATGGCTTGGACC Gene GeneID:280869|MTR:NM_001030298:63_cdna Constitutive 0 NULL GeneID:280869 28 GENE MTR NULL 5-methyltetrahydrofolate-homocysteine methyltransferase EMBV3_04715 TTGGTCTGGGACAAGAGTTAATGGCCTTTGTCAGTTCACCTGCGTGGTTAAAGGTCACCC Gene BVT0102_005231 + 0 NULL GK000030.2:17030115-17087362 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246417 TCONS_00246419 TCONS_00246421 TCONS_00246415 TCONS_00246416 TCONS_00246422 TCONS_00246418 TCONS_00246420 1 XLOC_150973 Coding TCONS_00246416 XLOC_150973 Coding Coding GPC4 X:17084489-17089680 j TSS184733 3893 1 TCONS_00246416_1 144 4 0.250674373795761 0.00124237047936325 0.00108064185807676 0.00204690712063661 0.00310533407501143 0.00383784289932158 0.00185600067896717 0.00185181276100173 0.00290319543416638 0.00285415263302367 0.000324992342715146 1.1330178217809e-05 7.56593379358009e-05 0.000198481036266597 0.00038785048571456 0.00148831303263034 0.00072676957994968 2.11081495229619e-05 0.000703864349704376 0.00293133714428286 0.00336666601192949 0.00264252554168763 0.000113109591241698 0.000147860994474261 0.000262261700630763 0.0041347798080692 0.00444739381859421 0.00167353123922552 0.000180123567380697 4.95918135976697e-05 1.19129141645264e-05 NM_001205784.1 GPC4 Bos taurus glypican 4 (GPC4), mRNA. 0.0 1784 100.00 0.253788851785256 XM_005262398.1 GPC4 PREDICTED: Homo sapiens glypican 4 (GPC4), transcript variant X1, 0.0 1918 82.10 0.494734138196763 TCONS_00246416_1 sp|O75487|GPC4_HUMAN GPC4_HUMAN Glypican-4; 1e-80 251 89.58 0.993055555555556 1 coding 1 1 1 1 -0.0974641651336819 0.368404720154789 -0.0148537374755096 0.822783891602202 GTGAAACTTCTCCAGCAAATTGCACAGCGATGTTACTGATGTCAAGGAGAAACTGAAGCAGGCCAAGAAGTTCTGGTCCTCTCTTCCTAGCAGTGTCTGCAATGATGAGAGGATGGCTGCAGGGAGCGGCAATGAGGATGATTGCTGGAACGGGAAAGGCCAAAGCAGGTACTTGTTTGCTGTGACAGGAAATGGTCTAGCCAACCAGGGCAATAATCCAGAGGTGCAGGTTGACACCAGCAAGCCGGACATACTGATCCTTCGTCAAGTCATGGCTCTTCGAGTTATGACCAGTAAGATGAAGAATGCTTACAATGGGAACGATGTGGACTTCTTTGATATCAGTGACGAAAGCAGTGGAGAAGGAAGTGGTAGCGGATGTGAGTCTCAGCAGTGTCCTTCGGAGTTTGAGTATAATGCAACTGACCACTCTGGGAAGAGTGCCAATGATAAAGCCAGCAGCGCTGGGGTCCCCGCTGCGGCCTGGCCCTACCTCCTCCCTGTCTTCTGCATCTTATCCCTGGTTATGCAGAGAGAGTGGAGATAATTCTCAACCTTAGAGAACAAGTGTTCATCGTCAGTTACAAAGGCACTGGTTATCACTTTTATACCATCCTAGTGACTTTGCTTTTTAAATGAATGGACAACAATGTACAGTTTTTACTATGTGGCCACTGGTTTAAAAGATGCTGACTTTGTTTTTGCATTCAGTTTTGTGGGAGAAGGGGATTGTATGTAAGGTCAGTCCGGCCTCCTCAGTCATGTTAAATGTGGCTAACAGTGTAGGTACAGAGCGTAGTTAGTTGTGCATTTGTGATTTTTATCACTCTGTCTGTTTGTTTTCTTTCTGTTTGTGGGGTTTTTTTCCTTTCAATATGATCTCACCTTGTTTCTTACAAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAAATAGCTGTACAGAAGCAGGTTTTATTTATCACGTTATCTTATTAAAAGAAAAAGCCCAACAAGCAGTAAAATTGCCATCTATCCCTGTTGTTTTAGTTGCCTTATCTGGAGAGAAGAGGAGGTGTTGTATCTTTTTTTCTGCAATGTGAAGGCACAAGGGGGCTTCTGAGCCACTTGTCAGGTTGTGTTCAGGCATCAATACCAGAAGAAGGTTATACTTCATTTATAGCTGGTGACTGGAGGAGGCTGCAGACTACCCATTTTGGTTGAGCTGGGTTGTATAAACTTCCATCACAGATCAGTCCATTTCTGGAAGCTGCTTATCCGTCGAAGATTCTTGATCTCCCTCGAAAGATATAAGGCATTCAGGCTATCCCAGGGTATCACACTTAATTTGGGGGTGGGTTTGGTTTGGTGGTTTTTTTTTTTTTTTTTTCATACAGGCACGTTAGCAAGCCACTGTGCTGGTCTTCGTGTCCACACTTGACCCTCTTTGACAAGATCAGGTGTGTTCAGGGTGGTATGGCCATAGACCACCCTCTTTGAAGTGATATCCCACCAGCAGAAGTAAGTGGCTAGCAATCTCACTTGGTCCCTCTTGGTTCAGATTCCAAACCCAATCATAGCCATCTGGGGGGCTAGCCAGAATTGGGGTACAGCCTGGGCTCAGGCAGTAAGTATCAATACTCAAAGTTTTTGTCCATGCATGTGTATTTGCATTTATTTGGTTTTGGATCCAGTGTTTTGTTTTGTTTTTAAAAAAAGAGATTCTAAAGTGTCTTATTGAGTCTTTTTCTTGCCCAGTCCTGCCCCATCTGAAAGCCAAAGGTCTTGCCATGGTTCACAGCTGTGTGCTACCCTATCAGCCAAGCACCCCAGTTGGGGAGCTCTGAGTGTCCAGATTTTTCTTCTCATGTTGTTGGGCGTTTGAGTGGGGGGCAGGGAGGAATGGGAATAGGTAAAACTGAGAAGATCACATCTTCGGGGTGACCTTTAACCACGCAGGTGAACTGACAAAGGCCATTAACTCTTGTCCCAGACCAAAGAGTAACCACTGCCTTGGCCCCTTTGGGGCCGTTTCCTTGTGTCTTTACCAAATGACAGCTCATAAAACTGTGAGAATGTAACAAATCACATTAAAAGGAGTTCCAGAAGTCTTCAGAAAGAATCACTCTGCAAAGTCTCTTCTTGCTTTAGACAGCCATTCAGATCCCAACCAATTCCCCAAAAGCTGAAACCCACAGAGAGGTTGTTTGTGTTACTGTTCAATCTTCAGTTATAAGAGTAATTCTCTATTTTTATATTGAAACATAATTACTTGATAGCTCAGGGTCTACATTTCATTCAGCTTTTTACACCAAATTCTGCAGAATGGACAAAATGAATATTGGGGCTGTTATAAACAGAGGCTTAATTTTATTAGAAGTAGCCAGTTATTTATTGAAGCATGATGTTAATAAAATAGGCATATTCTGGCTCATGTGTATAAGTTTTGTTTCTTTTAAACAAATCACAGAAGACGTAAAATTGAGAAGGCGCTCCATTTATGTATGAGGAAAAATTGATTGTAAATAGCTAAGCTGCCTTGTGAGAACTTGGAATATGTGCTGATACTTAGTAACTACCTCAGTTTTGAGGAATTTCCTTTTTAGCTTAGACTGCTATTACTTTTACTTGGTAGAAATGAATCTGGTCTCCAAAATGTGGCTCAGAGAGTTATCCCCATAGACCTTGTTAGATTGTTTTTAATTTAAAACCTTGATCTCTGCCCAGCTGTTTTCTTTCAGTCAAGTTCTCGAAACCAATAACATTTTCCGAATTAAATATTCTTGAAGGTTCTTCTGGAGTCTAAATGATTTGTTTTCTTTCTTTGCAATTTTTCCTGTTACTCTTTTATTATTTAAATTGTCTCTTGCCTTTGAACTTGAACTATGAAATAAACAAATCATAGATTTTTCCATTCAGGTCTGACTGGATAACTGTTGGCTTCCAACCAGCTGGCAGGCTCACACCCCTACTCTCCCCAAAACAGAAATAAAGGCAAGTTGAATATTTTAAAAATCTTAAGAGTTCCGTATATGAGGTAGAAGGAAAGCTTTGTGAGGAGACCTTACTTTTCCAAAGCCTCAGTTAATAGCATGTGAAGAGTTTGTGCTTTACAAAGTCATTAATTAATTACTGGTTACTTTCAAACACTTCACCCACTCTGTACCTTAAGAAACATGTTAGGACTCTTAGATTGTATTTTCTTTCAAAACTAGTAATTAGCACCTATTATTTTGCTAAAACTGTACAAACAATGGACTTAGATTTTTGAACTTTAGTTTCCTGGGTGTTAGAAACCTAACAATATACACATAATTTTTTACGAAAATTAACAGTTAACATCTTTAAAGTAAAACTTACTGTATGTGATTACAAAACCACAATAAAAATAGGTATAGATGGTGCTATACAAAATTCTACTTCCCCTTTTGTGTTGGCAGAATATGTCTATTTGCATAGCTAAAAGGTAGTATGTTAATAACAGTGTCTATTACAGGAAGCCTCCGTGTGTGTGTGTGTGTGTGTGTGTGCACTCGCTCTCAAGCAAATACCACACTATCAAATACAACTTTCTTTTTGAAATAAAACACTGAGAAGAATCTTCTAATTAGAACTTAGTGGGAAAAATATAATTTGGCATTCCGTGATATACTTTAAAAATTCAGTTTCTACCTTTAAACTCCTGATTGTTTAACTTTAAAAATCCTTTTTATATGTGTGAAAAATACCTGAAAGAGAACATGGCAATACAGGAATTCAAGCCCACCAGTAAGGCTAATGGCCATGTAAGAATTGCTTGTCTAATTGAGGTTTTAAGTAGGTCGTATATTGACTGGGTTTAAAAACAAAAACCTATACTACAAAAGTACAGAGTGAAAGTTTCTATCCTGTTCC EMBV3_36208 AACAGCAGGACTTGGAGTTTGCCAAGGAGATGGCAGAAGACGACGATGACAGCTTCCCTT Gene GeneID:504937|PSMD3:NM_001045900:70_cdna Constitutive 0 NULL GeneID:504937 19 GENE PSMD3 MGC129041 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 EMBV3_13342 AGGGGCAGTAAATAGAGTGTGTTTGGTTGGGGAAGTGAGAAGAAATGTGGTGCCCGGGAA Gene BVT0102_062571 - 1 EMBV3_32925 GK000011.2:49264016-49282708 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08417 GCAGTTCAGGGCAGTGGTCAGGGCTTGAAGAAATTTGGGAGTTCTCTTAGGACACTGATG Gene BVT0102_394530 + 0 NULL GK000030.2:83616159-83663265 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252261 1 XLOC_155202 NonCoding TCONS_00252261 XLOC_155202 NonCoding NonCoding - X:83637389-83637922 - TSS189482 533 0.712945590994371 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000396421425012066 0 0.000564898621032372 0 0 0 0 0 0 0 0 0 0 0 0 NM_001076241.1 ABI1 Bos taurus abl-interactor 1 (ABI1), mRNA. 1e-16 91.5 81.19 0.185741088180113 0 noncoding 0 0 0 0 -0.230839752161521 0.0943235347697746 0.0339422714724148 0.707492951748719 AAATTTTTAAATAAAAAAAATAGGTCTTGGGAACACTGCAATCTAGAGTTCTTCTCTTGACAGTTCACAACTCAGCTTCCTTTCTTGGTTGTTCCTTCTTTGCTGGGTATCTAAACACAGGACAGCCCCAGGGCTCATCCTGGGTTCTCTTCTCTATTTTCTTTTGCTCCATAGGTGAACTCATCCAACCTTAAGGTATTAAACCATCAGTGTCCTAAGAGAACTCCCAAATTTCTTCAAGCCCTGACCACTGCCCTGAACTGCTTATCTGTATATCCAGCTGTCCACTGTATCATCCCTTGAATGTCTAATAGGCAATTCAGATTAAATATATATAAATCATAATCTTGGTCCCTCCCAACTCCACTCTTTGTCAAATCTTCACCATCCTAATAAATGGTACCACCATCCATGCAGCTGCTGAAGCCTCAAACCTAGGAGTTTTTTTTAATAATGATTTTTTAAAAATTGAAGTATAGGTCATTTACAATGTTGTGTTAGCTTCAAGTATACTGCAAAGTGATTCAGTTTAT TCONS_00247364 TCONS_00247363 TCONS_00247365 . 5' 21232 TCONS_00247364 TCONS_00247363 TCONS_00247365 . 5' 21232 EMBV3_13951 CTCCCACAATCACTAAAGATTAGGAAGACACCTTAAATGGCTCCTTGGGCCAAGAGTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17166 CCTCAGTTATTCTGATTTCCCCATAATTTGCCTCTGGTTCAATCTCCATGTTTATGGTCC Gene BVT0102_417896 + 1 EMBV3_29142 GK000028.2:41979530-42075888 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159750 TCONS_00159754 TCONS_00159755 TCONS_00159746 TCONS_00159747 TCONS_00159752 TCONS_00159748 TCONS_00159753 TCONS_00159749 TCONS_00159751 1 XLOC_097494 Coding TCONS_00159750 XLOC_097494 Coding Coding FAM35A 28:42057151-42096559 j TSS119647 3235 1 TCONS_00159750_3 906 0.0327666151468315 9 0.91813637171061 0.00200874124472324 0.000521174690616977 0.00268317121418059 0.000856065146826849 0.000927844362731951 0.000149454524515423 0.00143934594415554 0.00129953122846777 0.00126048682260973 1.27118840298836e-81 2.5762887077902e-09 7.25756213801825e-05 2.68131760140059e-05 0.000414410613992361 0.000507710759704283 2.18553522159516e-08 3.52025883955822e-21 2.06466367038586e-08 0.000425102193913541 0.000476330837517599 0.00104014599823882 1.63171040676498e-23 7.08513204766503e-09 1.80823512624144e-18 0.000365306854200461 0.0017753923477864 0.000734082534121144 2.68373963785995e-05 9.53172091954423e-13 1.07823577825141e-12 XM_005226547.1 FAM35A PREDICTED: Bos taurus family with sequence similarity 35, member A (FAM35A), transcript variant X4, mRNA. 0.0 5205 99.90 0.894281298299845 XM_005269918.1 FAM35A PREDICTED: Homo sapiens family with sequence similarity 35, member A (FAM35A), transcript variant X1, mRNA. 0.0 2830 80.59 0.937557959814529 TCONS_00159750_3 sp|Q3UEN2|FA35A_MOUSE FA35A_MOUSE Protein FAM35A; 0.0 1096 63.88 0.984547461368653 0 coding 1 1 1 1 0.0280998072776601 0.896175272819177 -0.00921312943364461 0.890346074855897 AATGACAATTACCTAGGGAGTGAGTCCAGAGAGAGACCCAAGTACTGGGCCGCTGAGCGAGAAGCTGAGGAGACGAGGAGGAGGCAGCAAAGGAGACTGAGAAGGAGCATATGAAACTATGAGTGGAGGATCTCAAGTTCACATTTTTTGGGGTGCTCCAGTCAGTCCACTGGAAATGACAGTCTCACAGGAACCAACTTCTGTAGCGTCCACTGCTGAGACCTGGAAAGAAATTCAGGTTTTGTACAATCACCATTCCTTATACCTGAAGGATGAAAAATGCAGGCACAAAAATCTTGAGGACTGTCAGGCCCTGGAACCTCTGGGCCTTCCAGATCTTCCTCATGGTCATTTTCCAGCAAACTCTATGAACAGATCTGTTCACATGAAAGATGACACCACACATCGCATTTCTGAAGCACAAACTGTAAAGTCCCAGAAGGCTTACCCCTTGGGAATGAGTGACAGAACCAGCTCCAGTGAGCAAGTACGTGGATTTAAGGGAGGCGTTCAGCATTTTACTGAAGAAGAAAAGTATCAAAAGCTTTCCAGTGAACTTAAGAAAACCAGAAACGAACAGCATGATCAATCAAACATGTGTGGTCAAAACATTCCAAAAAATCCCTTTCATTTAGCTCATAAGTGTGCAGCTATATTGGATGCGGTCTGTGGTGCTGAGCAGACTAACACGCCAGAAGCCATCAAAATAAACAGTGCACCAGCAGAGCATCATGAAATACAGAACCAGTGTCTGGAGTTCTTTCTCGCTAACACAGGAGACAAACCAAGGCCTGAAGGAACAGTAGGGAAGGCGTCAGGTGTTAAAATATCCACTGACACTGAATTTCTTAGTATAATGACCTCCAGCCAGGTTGCTTTTTTAGCTCAAAGGAAATATAAAGGGCAGAAGTCTATAAATAAAGGGACCATAAACATGGAGATTGAACCAGAGGCAAATTATGGGGAAATCAGAATAACTGAGGACAATTTGATTCAGTCCAAAGATGATTCTGCAGGAGGAAATGAAGATGGACAGAACCAAGCCTGTTCCCTTGAACTTTTTAGTCCTGTTTGTCCTGAAACAAAAAGTAGCCACACTCTCTTGAACACTGATAAAGATCTTGAAGAAAATATAGGATCTCAAGGACTTTTCAATTGTGATGATAAGTTTCAACCAAATGAGATACTCATTGAGTCATGTAACTCAGGAATACTGTGTTCTCAACTAAATACCTTCTGCAAAAGTTCTGGTAAGAGAAGTTGGACCTCTGAAGATAAATCAGGCCATCCTCAGGCTCTATCTGAAGTCCCCCATGTAGCTAAGAAAATTAAATTGTTTTCTAATGAGAGAGATCATACTGTAACAGTGGACCGGAGGAACATGTTTGGATTTAAGGGCATTAAAAAAACCTCATTAATAAAAAACTGTGATTCTGAACATCAGAAATACAATTGCTTAGTCATGGTGTTATCTCCATGTCACATGAAAGAAATAAATATAAAATCTGGACCAAATTCTGGCTCTAAAGTGCCTTTAGCAACAATTGTGGTAACTGACCAATCAGAAATTAAGAAGAAGGTGTTTCTGTGGAGGACTGCAGCATTCTGGGCACTTACTGTGTTTCTGGGAGATATAATTTTACTCACAGATGTCACTATCCATGAGGATCATTGGGTTGGTGAGACAGTCCTGCAATCAACATTTACCAGTCAGTTATTAAATCTTGGGAGTTATTCATCTGTCCAGCCCGAAGAATATTCCAGTATGATTAGTAATGTTGTACTTCAAGACTTACTGGCATATGTATCTTCAAAACATTCCTATCTCAGAGATCTTCCTCAGAGGCATCCTCAGAAAATGAGCAGTATAGAATTTATAGAATTGGAGCAGCTTCAGCCAGACATACTAGTCCATGCAATTCTAAGAGTTGTTGATATCACTGTACTGACAGAGGCGTTATACAGTTATAGAGGACAGAAGCAAAGGAAAGTTATGTTAACAGTGGAACAGACCCAAGGTCAACATTATGTGCTTGTATTATGGGGTCCTGGAGCAGCCTGGTACCCTCAACTTCAAAGGAAAAAAGGTTATATTTGGGAATTTAAGTATCTTTTTGTTCAGCGCAATTGCATCCTAGAGAACCTAGAATTGCATACAACACCATGGTCATCCTGTGAGTGCCTGTTTGATGATGATAGAAGGGCAATTACATTTAAAGCAAAATTTCAAAAAAACACACCCTCCTTTGTGAAGATGTCAGATTTAGCAACACACCTAGAGGAAAAGCGTTCGGGAGTGATTCTAATGAAAGCCCAGATTTTAGAGCTAGTGTTTCCCATTGCAGCAGTTCAGAAAATAGCTCTAAATGCTCGCAGTTCTCTGAAGAGTATTTTTTGTTCTCTGCCCAATATTATATACACTGGCTGTGCAAAATGTGGATTGGAACTACAAACAGATGAGAACAAGATCTACAAACAATGTTTTAGCTGCTTGCCATTTACTATGAAGAAAATATACTATAGGCCAGCTTTAATGACCATAGTTGATGGAAAATATAAGGTCTGCATCCATGTAGGATCAAAGCTGATAGAGAAGATTCTGCTCAACATTTCTCCTGACTGGCTCAACAGAGTAATAGCCCCTCCCTCTGACGTCACCTACGGAATGGCCGCCGCGGACCTGCTCCATGCCTTGCTGGCGGGCAGCGGGGCGCCTTGTGTCCTGAAGGTGCAGAGCCTCTTTGTGTTAGATGAAAACAGCTACCCACTGCAGCAGGACTTCTCCCTCCTGGATTTTTATCTCAACGACTTGAAGCACGCATCCCATGCTCTTCTCTGAGACCAGAGGAAGAAAATGCAGGCACTTCAAGAGCAGTGAGATGGTTTGTCTTTGGAAATGAACGACAGGGCTTTTGCTCGGGGTTTAAAATAAGTATGTTTTATAAAGAGAACTGTGCTAAATACATTAATTAAAACTCCCCCCCCCCCCTAAGAAAATTCTGTGAAGTTTATTGTTCGTTTATTTTTTGGTCTTTCCCTTTCTTGCTTCTAGAGAAATCTGGCAATGAGGCAACATCCAGCAGGTCATTAGGATTAAGTCTCTCTGTTTAGTCCCTGCTCCATTCTGGGCACTGTCCCAAGTACTGAGACATGGACCTGAGGAATTGCTTTTCTGTATGGTCACAAACTTAATTTTTTTTCTTACTCCTTCATTAATAAACTGTAGACATGACAT EMBV3_21699 AAGACCTGTCAAAAAGTTTTGAAAGTATTTCCGTCTTCAAAAGTCGTAAGGCAGGATTAA Gene GeneID:615190|CHIC2:NM_001078048:140_cdna Constitutive 0 NULL GeneID:615190 6 GENE CHIC2 NULL cysteine-rich hydrophobic domain 2 EMBV3_11970 CACAACACTGTAAGTCAACTTTAGTAGCAGTAGTAGTGTTCAGTCACTCAGTCGTGTCCC Gene BVT0102_079592 - 1 EMBV3_00432 GK000007.2:19025594-19043741 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43506 GAAGGGCAGGGCGCCCTGGAATGGGTTCGCCCCTTGAAAATCCGGGGGAGAGGGTGTAAA Variant GeneID:100336997|LOC100336997:XM_002685421:9_cdna 462^528 3 EMBV3_37641 GeneID:100336997 2 GENE LOC100336997 NULL hypothetical protein LOC100336997 EMBV3_34297 CTGCCTTGGTGTGAAGGCTGTAAAAGTTGTACATTCCCCCAAGTGGCTGTGACATCTCTC Gene GeneID:522905|AKAP8:NM_001102072:74_cdna Constitutive 2 NULL GeneID:522905 7 GENE AKAP8 MGC165917 A kinase (PRKA) anchor protein 8 EMBV3_13034 ACTAAGCCACAGATACCAGAGCCCATGGCAACCCAATCCTTCTATTATGGATGCGGAAGG Gene GeneID:768029|MGC137018:NM_001077088:66_cdna Constitutive 0 NULL GeneID:768029 17 GENE MGC137018 NULL hypothetical protein MGC137018 EMBV3_12748 TCACTTCTTCTATGGTTCCCCCAGGAAAGGGCACAGCCACTCTTATGTCACGGCTGAAGA Gene GeneID:616945|MLANA:XM_002689599:76_cdna Constitutive 0 NULL GeneID:616945 8 GENE MLANA NULL melan-A EMBV3_28139 AGAGCAGATGCTGGAGGGACAGACGCAGGTTGCAGAAAATCCCCACTCTGAATATGGTCT Gene GeneID:513162|DPY30:NM_001077916:14_cdna Constitutive 0 NULL GeneID:513162 11 GENE DPY30 NULL dpy-30 homolog (C. elegans) EMBV3_19337 ATATTTAAGAAAGGCTTGAGTAGACTTCCCTGGCGGTCCAGTGGCTGGGACTTCACCTTC Gene BVV0101_075554 + 0 NULL GK000027.2:7681823-9792003 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37002 GGTCAAAAAGAAGAGCTGTGCTGGATGAACCCATAGTGGAAGGTTGTCGGGGTAGGAATG Gene BVT0102_071909 + 0 NULL GK000008.2:7453907-7462366 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226833 TCONS_00226836 TCONS_00226834 TCONS_00226835 TCONS_00226831 TCONS_00226832 1 XLOC_138096 Coding TCONS_00226832 XLOC_138096 Coding Coding NEIL2 8:7460673-7472053 j TSS169484 3666 1 TCONS_00226832_3 162 4 0.678179101854293 0.000577782112106343 0.000323333589103584 0.000302490896076806 0.000166459899707732 0.000330800983973617 9.32500441994155e-05 0.000141114879764973 0.00061013403614611 0.000392410653711534 4.21635961374312e-05 1.38005146586694e-06 7.29692397390285e-05 0.000148049199176673 3.81182706503521e-05 7.20407988793127e-05 6.0420074014345e-19 1.10647737716123e-12 1.56528107640051e-09 0.000470362801312371 0.000663946491474534 4.42744190339591e-05 2.13003862442744e-16 4.50842661795988e-17 1.19819364458653e-12 0.000396721414841405 5.3647662636379e-05 0.000946020447040213 1.75451865597427e-12 6.62521550080074e-12 5.54421920939626e-13 XM_005209827.1 NEIL2 PREDICTED: Bos taurus nei endonuclease VIII-like 2 (E. coli) (NEIL2), transcript variant X1, mRNA. 0.0 1891 100.00 0.285597381342062 NM_145043.2 NEIL2 Homo sapiens nei endonuclease VIII-like 2 (E. coli) (NEIL2), 2e-98 365 76.55 0.128750681942171 TCONS_00226832_3 sp|Q6IE77|NEIL2_BOVIN NEIL2_BOVIN Endonuclease 8-like 2; 3e-110 322 100.00 0.975308641975309 1 noncoding 0 0 0 0 0.137145379152577 0.243983701793629 -0.0655247350669376 0.276493951294041 GGGTGCCAGGTGACCTACATCAGGGTTAAAATGAAACCCCAGCTGTTTCTCAGTTACCAGGGCTAATTTTCTCTAGTTAAGCTGGCTGTGGATCTGACATGACATGACCCCGTGACTTGTCACGGTCCTGAGCGCTGCGTGGTTGTCACATACACAGTGCTCCTGCTAGCAGGATGGTCCGGGCATGCTGAATCGGCATCTGTGTCTGTGTCCCTTACAGCTTTCTCTGTCCCAGCCATCTCTCCACTGAAAGAGGGGAGACAAAGCACCAGCAGTGGGCTGAGATGATTTGGGAAGGCAGACAGAGGAGGACAGAGAAAGCATGGAGATGAGCTAGGGCCGCAGTCCAGGAAAAAAGTTGACAAGGGCTGGCTCCTGTTCAGGCTGCAGGGTCAAAGCGGAGGACGCTTGTGGTGTGGTGCCTGGCATGTTGTTGGTGCTGCCTGGAGAAAGGGATGCCAGAGGGGCCGTCTGTGAGGAAGTTTCACCATCTGGTTTCTCCCTTTGTGGGGCAGCAGGTGGTCAAGACAGGAGGCAGCAGCAAGAAGCTAAACCCCACAAGTTTCCAGTCCCTCTGGCTGCAGGACAGCCAGGTCCATGGAAAGAAATTATTCCTTAGATTTGATCCAGATGAAGAAGCTGTGTCCCTGGGCAATTCCCTACTGTCAGAGCCTCTACGAGAAGGAGAGCAGAAGGACAAAGCCAGGCACCACCAAGAAGCCTCTGACCCGTCCTCCTGGTCCCCGGGAGGAGACAGTGCTGTCCCCAGTGGAGACGATGGTCTGCAGTGTTTGGGGGGAGACACCCCTGCAGGAGGTGCTGAGAGATGGCTGCAGGTCAGCTTTGGTTTGTTTGGCAGCATTCGGGTGAACGAGTTCTCCAGAGCGAAGAAGGCAAACAAGAGGGGTGACTGGAGGGACCCTGTACCCAGGGAACATCATTAAGAACGAGGCCCTGTTCAGAGCCGGGATCCACCCGCTTTCTCCAGGCTCCCTCCTGGGTCTTCCACGCCTCGAGGCCCTGGTGGACCATGTGGTGGCCTTCAGTGCAGACTGGCTGCAGGGCAAATTCCAGGGCACACGGCAGCACACGCAGATCTACCAGAAGGAGCAGTGCCCTGCCGGGCACCAGGTGGTCAGAGAGTCCCTGGGGCCGCCGGGGGGCTTCCAGAGGCTCACGTGGTGGTGCCCCCAGTGCCAGCCCAGGTTGTCAGCAGATGAGCCCAAGCAGCTGCAGCCCTCCTAGAGCGTCCAGCCTCCTCCTATATGGAGCTTTGCCCTGAAGGGACTGTGATGCCTGAGCATTGCAGACAGAGCTGTGGGCAGAGATTGGGACTGGGCACAGGAATTGGGTGGTTGGGATGCTAGGACTATTGATGTCCATCTCACTGGAGTTCGGTCTAGGGCGGTTTTCACAAAGTTTGATTTTGTTCTCTGCTAGTTTTGGTTAATTCTTCCTATCTGATCCCCATTGTGAAAGATGAGACAAGTCACAATGGCACTTTAGGGAAGACCTCCCGAAATGACAGTGTGGCAGAGCAAGTGAGAGCCAGTGGGAGACAGCCAGGCCCAGCTCTGCTTTGCAGATGTTTTATTTGGTTTGGTTTTGGTTTTAAAACACTGGCTGGAGTTAAGATCCTCCATTTGAGAACCAGGAAAAGGGAATTATCATCCTTCTTTTTTCCTCAAGAGGGATCCAGGGCTGAGGGGGAAGTAACAGGAGAGTAGTGCTCGAATTTAGCCTCTCGATTGGACCCTTCCCGTGGGACAGAGATACCAGGAGAAGGAGGAGAGACAGGATCAGGGAGCTGGCCATGTTCTTGGTGTGTCCAATGGGTTATAGAAACAAAAACAAAACCTTGTTTCCTCCTCAAGGTGATGTATTTGTGACTACTGACAAGCTCACCAGTACAGGGATCAAAGTTGTTAGCAAAACCTCGAAGAAACCAGGACATGGAAATAAAGCTGTTCATTACTTTGTGCTGTCATCTTTATTTGGTAGGAAAGATTCTTTCACCATACGTAACTGAGCTCTTTGTGAAGGCACCGTGTGAGACGTGTTGAGTTGGCCAGATGGGTCTGCTTACAAGGAGCGGGGCTGGGAGGAAGGCAGCCATGCACTCGTTACTCTTGTCTGTCTGAAGTCACTGAGCTGCCCACGGTGGGGTGGGGAAAGCCACCTGATGGCAGGCACTGGCTGGGGGCCAGGGGGTACCCACACAGGCCGCTTCCTGTAAGTTAGTGTCTGCAAGGGGCTGGAGTATAAGAAGGGCTGGGCTGGGCAGACATCACAGCCTGCATGTGAGTGGACACTCACTGAGATTAATAGAAAAGGGAAAATGCTGTTGGCAGTTGTTGAGAAAAGAAGCCACAGAACTAGAAACAGCAGTGGAAGTGGAAAGAGGCAGAGATGGGAGGGTCACCATGGTGATGGATGTCAGCTGACTGGATGTGGAAATATGGCTGGGGAGGGGCTGAGGATGGCTCAGGCCTGGCAGCTGAGAGCTAGAGGAAGCCACCCCCACTTTGCCCTTGAGATAGAAAGTCGGAGGAACTGAGCAGGTTCCATGAGGAGACAGACCTTGTGCGCTGAGCTTGGGGTACCTGTACCGAAGCAGAGGACAACAGCCAGGAAGCTTGCTGCCAGTGCAGGCTTGCAGACATGGATTTGGGAGCTTTCCTTGGAGCGGAGGGTCAGTTCGAGAAGGTTAACAAGGGTACTCGTGCGGCCTGAGAAGGATGGTCACAAGAGAGCCTTAAGATCTTTTGTATAAGAAGCAAGAGATGACAGAAGCCAACTGGAGATCAGATCGAAGAGGAGGAGAGAACTCTGGGGGCAGCCAGTGGTGCACAGGACAGAGAAGAGGCCTCTGAATTTGACAGTAGGGCAAATTTGAGGTCATGACCTATGAGAGCCAATTGTGCAGAATGGCAGCCAGTCTGTAGGGGCTGAGGACTGGGTGGGAGCCCAGTGAGCTGTGAGGGAGCTCTGCTCTTCAAGAAGGTGGTCCTTGAAGGAAATGAGAAAGAGGATCACAGACGGAAGTGATGTCAGGATGTGTGTATGATCAGGTGAGGGGGAAACCAGGATGAAGAGAAAATACAAGTGCCAGCATGTAGAGAAGCCTGGGCTCGAGTAGGAAAAGAAAAATAGACACAGAGAAAATGAGCTGGAGGTGAGGTCTTTTTGAGGCACAGAATAGGAGTTAGGGAGCTTTTGTAACAGCTGTGAGGGGAAGTTAGAGCTCAAGGGAAGGTTGTAGAACCAGGCTGGAGACCAGAGTAGTTAGCTGCTCCATTTCCTGACCTTGTCCAGCAGTCTCTAGTAGCTTAGGGTCAAAAAGAAGAGCTATGCTGGATGAACCCATAGTGGAAGGTTGTCAGGGTAGGAATGGTAGAAAGCCAAGAGGGAAAAGGAGATTCCTTATTTTATCATTTAAGTTGTTAAAATTCAAGCCACATAAAATTTTATAGAGCAAAACATGGGAGAATAATTCTCAGTCTACTCTGTCCTCTCAGGAACTGACTTATCACTTCTCTGACTTCAGTCTGTAATGAGGAAAATAGTAGCACCTAGTAGCTGAGTTGTGAAGGTTGATGACCACGTTTTCAGTTCTTCAGCAGAACTGCATGGACTGGGTTCCATGTGGAGGTGACAGGGAAGCAG EMBV3_02545 ATGCACATCACCGTGGTGCACAACTACCAAATCTTCATGCAGCTGGAGAAGGTCTGGAAC Variant GeneID:512902|CRAT:NM_001075587:79_cdna 709^762 1 EMBV3_04244 GeneID:512902 11 GENE CRAT MGC142781 carnitine acetyltransferase EMBV3_36422 AAATGAAGGTGTTGGCCAGGCTGCGTTCTTCTGGGAGTCTCTAGGGGAAAATTGGTTTTC Gene BVV0102_311373 - 1 EMBV3_10546 GK000025.2:17407208-17411488 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14919 TGTGGCCTACTGGCACAACACGCGACGCGTTGAGTTGCGCAGCACGAGTCTGAGAATGGG Variant GeneID:515507|TMEM101:NM_001046202:248_cdna 704^782 1 EMBV3_29209 GeneID:515507 19 GENE TMEM101 MGC137376 transmembrane protein 101 EMBV3_19416 ATCTGTGTCATCATTTTCATCAAGTAGGAGCCCCACGCCTACAGAAGCCCCCAACTCCTG Gene BVT0101_011178 - 0 NULL GK000027.2:15243400-15284101 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155077 TCONS_00155080 TCONS_00155081 TCONS_00155076 TCONS_00155082 TCONS_00155079 1 XLOC_094635 Coding TCONS_00155079 XLOC_094635 Coding Coding FAM149A 27:15258530-15300920 j TSS116111 1936 1 TCONS_00155079_4 479 14 0.954658048078511 0.00303814342030547 0.00769454460263368 0.00635378254914737 0.0032826445071905 0.00274051475347269 0.00263424480706303 0.000858564027070107 0.00493095784813157 0.00547117744088729 0.001147190847745 1.91619887042891e-11 0.000628488495297214 5.4578287334689e-07 0.000123235872479841 0.00101734015613005 5.48468751238207e-10 0 1.18715537162029e-52 0.00189216432707636 0.00335713612906905 0.00525566100986332 1.50157572090965e-11 3.27851265486722e-39 7.62842757506335e-47 0.00684646310251593 0.00656739256228665 0.00164544308209167 1.38231832574316e-07 2.26822588426212e-07 7.44809122312381e-09 XM_005225977.1 FAM149A PREDICTED: Bos taurus family with sequence similarity 149, member A (FAM149A), transcript variant X5, mRNA. 0.0 3449 100.00 0.987086776859504 XM_005262905.1 FAM149A PREDICTED: Homo sapiens family with sequence similarity 149, member A (FAM149A), transcript variant X5, mRNA. 0.0 1508 77.38 0.985537190082645 TCONS_00155079_4 sp|A5PLN7|F149A_HUMAN F149A_HUMAN Protein FAM149A; 0.0 656 69.29 0.997912317327766 1 coding 0 0 0 0 -0.31186923970331 0.045168239119369 -0.161520538763129 0.0660471725864198 AGACAAGTGCAGCTCCCAAGGAACTGGAAGAGGACTGTCAGAAGGATCTGGAAAGCAGAGTTTCACTGTGAAAAGCAAAGATCCTTTACCTACCCATTTTACAAAAAATGTACAGAAAGCCATTGCTAAATACAGTCGGGAATCTGTGTCATCATTTTCATCAAGTGGGAGCCCCACGCCTACAGAAGCCCCCAACTCCTGGTCTGGGTCTGGGACACAGAGTTCAACAACTGGTTTATCTACAGAGAGGAGCTCCATTTACTCCTGGAGAGATGATGAGTTTGACAAAGCCAGTGCACAGAAAGTACAGCAGTTATTCTGGGAGGTCGAGGAAATGTTGTTTGAAGGGAAAGTAAGCCCTCAGACCCAGAATCTCCAGGCTGAGTGCCGTGAATGGGCGGGCCGGTCCCTGCATCTGAGAGTATTAGGAAGACAGCTCATCCCGCCTGCTGATGAAGGAGTTGAGCATTTCCAGAGCAGCCGGCCTGCTTCTGCCATCCAAAGACCCTTCCTTGATGACTGTGGACACAGCAGCAATATAAGAGAGCTGTGCATCTCTGGCTCTCAGATAGTCCCAGCCGTTCTCCCAGCCCCCTCCCTGCCGGGTCCTGATGGCACCAGGGTTGTGGACCTCATGGCACATTCATCTCTGGAAGAAGAGATTTTTGATGTGGATGGAAAGATTGAAGAGTATTTTGCTTTTGACAGAAAACAAGATGGTGAGGACTGTCTTGAACAAAAACCAGCTCATCGTCGCAGGACGTGGCGTAAGCACGGACTTCCTCCCGTGTCGCCACACGACTGTATCAGAGATGCGGTGGCTGCGGAAGTGTTTGATCACGTCTGGATGAATGTGGTGGAGGTGTTGGAAAAGCTGACCAGAAAACACTGGGAACTTACAGAAGGAAAAAAACAGAAAGAAAAATTGAAAGTAGCTGAGAATAAATCTCCACCCACAGTCATTTCCCGCATTAACGCTGATGTGTCCAGTGTTCCGCCATCCAGAAGCTCTGAAACTCGAAGTGTATCCCTGGCTTCTCATCTTAACCCACAGCAGATACATCGCTTCTCCAACAATTTTTATAGTGACTTGAATGGTGTGATGACAATTCAAGCAAAACCACTTCAGCAGAGACCTACCTGTTTTGCAGATAGAACACAGAGTGAGCAGGAGGACAAACCATTGGGTGTAGGATCCGCTGTTCTTTCCTCAGCCCAGAACCGTCTGGCCCGGATCACGGATGCTCGTGGACCACAGACGTCCGCAAAGAAAACACTCGCGCACAGGAGGCTGCCTTCTCTTACCTCGGACTCCCAGAGGCTGAAAATCCCCAGTGTGTACAGTGATGAAGTTCTTAGGGGGACAAAACTGCAAACTGGTGTGGACCGTATGGGCTCCCCACCGACTCAAACCCCACGGAGCCGGCTGCCCCCAATAGGCTCCGAGACTGGAGAGCACCACGTGGCAGGTCCCGGATCGCGCCCTGTTTCCCTCAGAGGAAGACATCTACAAAATCATGGGTTGAGTGCATTACCTGATAGTGTAGAACGGTCACCTCTTCGAGAAAGATCTCTAACCATGGAACAGTTTTCAAGGCCCAGCACTACCCATACATTTCGGTCAGATACACCTCGAAAAGGTTCATTAACACTGATGGAATTTGCTGGGCACATGTGGACAGGTCAAGGTTTTTTAACAGGCTCACAGTATCCACCTAAATCTTTCCAGAGGACAACACTGACTTTAAGAAAGAGATTCCAAGTGGCCTCCTGATGTGACGTCATCAGAACTACAACCCTTCTGGAGCACTGAAAGCCTCAGCACACCATTTATCACTTGAAAAGTGGAAGAAGTATTATGTTATGTATCTGACAGTCTGAGATGTTAGACTGCCCGAGAGAAATGCAAACAAATAAACAATTTAATTTTGAACAC EMBV3_40757 ACTGCCTCACCACCGATAAGTACGACGGGCACACCACCTACCCCTCCCATGTGTATGAAT Gene GeneID:281650|BLVRB:NM_174251:499_cdna Constitutive 0 NULL GeneID:281650 18 GENE BLVRB NULL biliverdin reductase B (flavin reductase (NADPH)) EMBV3_35626 CCTCAGGCCAAACTACAGGGAGGGAACACAGCCCCACCCATCAACAGAAAATTGGATTAA Gene BVT0102_214654 + 0 NULL GK000019.2:58691874-58718133 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130667 TCONS_00166662 TCONS_00170307 TCONS_00170308 TCONS_00050649 TCONS_00157544 TCONS_00010959 TCONS_00202596 TCONS_00138322 TCONS_00034349 TCONS_00115881 TCONS_00082315 TCONS_00156619 TCONS_00054588 TCONS_00252244 TCONS_00242566 TCONS_00220233 TCONS_00110583 TCONS_00116078 TCONS_00180222 19 XLOC_079375 XLOC_101498 XLOC_103554 XLOC_030769 XLOC_095999 XLOC_006510 XLOC_124008 XLOC_084530 XLOC_020582 XLOC_070050 XLOC_050971 XLOC_095079 XLOC_032397 XLOC_155185 XLOC_149230 XLOC_133550 XLOC_066485 XLOC_070247 XLOC_109991 NonCoding TCONS_00170307 XLOC_103554 NonCoding NonCoding - 3:76502410-76506268 - TSS127283 1165 3 TCONS_00170307_3 53 0.619742489270386 3 0.698729582577132 0.00165996071885295 8.75245950653748e-10 0.00158219777544241 0.000492602417543908 0.00187246954428423 1.23306408871609e-08 0.000776294972057966 0.00107559476597507 0.00117148845260067 0.000601855386969759 1.61977147579088e-05 2.93489452346614e-05 1.57436190237293e-08 5.44167535036193e-05 7.65943222366372e-05 0.000237612926241368 0 6.46115022725262e-05 5.96416906755687e-05 0.000704405989459023 0.00244596818346332 8.77399300106572e-12 4.04204438829008e-12 0 2.88491829702064e-08 0.00133468797545479 0.000738554927132387 4.93391180198928e-11 1.0640420760283e-09 3.58213496501595e-12 NM_001101892.1 C3H1orf109 Bos taurus chromosome 3 open reading frame, human C1orf109 (C3H1orf109), mRNA. 1e-114 417 83.38 0.339914163090129 0 noncoding TGGTGGCTCAGTGGTAAAAATCTGCCTGCCAGTGTAGGAGACCCGAGTTTGATCCCTGGTCCAGGAAAATCCCACAGGGAGGCCTGGAGTGCTGCAATTCATGGGGTCGCAAAGAGTCGGACACAACTAAGCCACTGAACTGAACTGAACTGAACCCTCAGTAAATCTTTAATCCAATTTTCTGCTAATGGGTGGGTCTGTGTTCCCTCCCTGTAGTTTGGCCTGAGGCCATACTATGGTAGGTATAATGGTGACCTCCTTCAAAAGGACTGATGCCAGCATGCCATGGCTCCCAGGACTGTTGTATTCATGACTCTGACCCTGTGGCAGGCCACTGTCAACCCACACATCCACCGGAGACTCCTGGACATTCACAGGAAAAGATGAGCGCATGTCCTTCTATTCTACCATCTTGACAAGAACCATAAAGAAGGCTGAGAACTGAAGAATTGATGCTTTTGGACTGTGGTGTTGGAGAAGACTCTTGAGAGTCTCTTGGACTGCTAGGAAATCAAACCACAAACCAGTCAATCCTAAAGGAAATCAGTCCTGAATATTCACTGAAAAGGCTGATACCAAAGCTGAACCTCGAATACTTTGGCCACCTGATGTGAAGAGCCAACTCGCTAGATAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGAGACAACAGGGGATGAGGTGGTTGGATGGCATCACTGACTTGATGGATATTAGTTTGAGCAAGCTCTGGGCGATGGTGAAGGACAGGGAAACCTGGTGTGCTATGGTCCATGGGGTCGCAAGATGTTAGACATGACTGAGCAACAAAAGGACTTCTCAACCTTTTCAGTCCCGGTAAGGAACATGGAACTAACAAGACACCATCAAACAGAAGGATTTGGAAAAGGTCAAAAGGAGACAGGAGATGCCCGTCCATAGGTCCTACCAACCTCTCAGAATCCTCACTGAAATCCACCTTGGCTGAGCAATGTGTGTCACGAGGAAGGACCCTGAGTCAGAATGACTGGTTAGAGGCCAACCTAAGAACAAACCTCATCACCATAAAACCCAAGGCTGTGAGCCACATGGCAGAGTAGTTCTCCTGGTTTCCCTTACCCTCCTGCTCTCTGCCTGGACACTCCCTTCCCAATAAAGTCTCTGGCTTTATCACCA TCONS_00173729 r 5' 533544 TCONS_00173729 r 5' 533544 EMBV3_24619 GAGGAAGAAAGTCTAAATGTTTATATTCAGGGGCTAGTGTCAATCAAAGACAAACCGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36414 TTGTAGAAAGATGAATGAGGTCAACTGCTACCGCTGTGGCGAATCCGGACATCTAACCCG Gene GeneID:785599|LOC785599:XM_002699998:15_cdna Constitutive 0 NULL GeneID:785599 X GENE LOC785599 NULL similar to cellular nucleic acid binding protein EMBV3_18550 CTTTCAAACCCTCATACAAGGTGACTTGAGATAAAGGAGCCTTAGCTGCACTGGCCTGGG Gene BVV0102_055996 + 0 NULL GK000014.2:33226918-33243587 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051680 TCONS_00051672 TCONS_00051679 TCONS_00051678 TCONS_00051673 TCONS_00051677 TCONS_00051675 TCONS_00051671 TCONS_00051674 TCONS_00051676 1 XLOC_031262 Coding TCONS_00051672 XLOC_031262 Coding Coding CSPP1 14:33228977-33329674 j TSS38495 4749 1 TCONS_00051672_7 1125 0.0953885028427037 27 0.953106379597998 0.000673526230050918 0.000518308100711086 0.000936053481746947 0.000297824750018848 0.000244479867524308 5.85415095526159e-05 5.6503728300999e-05 0.000566675551495861 0.000202543649226397 0.000402465515572597 4.92372479420527e-07 2.07852485405519e-243 4.69269217709327e-05 0.000292625117523724 0.000174056749213128 8.46370054192778e-05 4.22913838384641e-06 0 0.000458860577986641 0.000792548457671278 8.15300244594736e-05 8.54504493337729e-89 4.67024199256769e-211 9.44040012207032e-107 0.000333441946561536 0.000748666011943733 0.000497882080243994 1.31332658152485e-96 2.23116668543836e-07 1.76999913738864e-05 XM_005215480.1 CSPP1 PREDICTED: Bos taurus centrosome and spindle pole associated protein 1 (CSPP1), transcript variant X3, mRNA. 0.0 6937 100.00 0.809644135607496 XM_005251306.1 CSPP1 PREDICTED: Homo sapiens centrosome and spindle pole associated protein 1 (CSPP1), transcript variant X2, mRNA. 0.0 4176 88.68 0.67930090545378 TCONS_00051672_7 sp|Q1MSJ5|CSPP1_HUMAN CSPP1_HUMAN Centrosome and spindle pole-associated protein 1; 0.0 1650 84.87 0.933333333333333 1 coding 1 1 1 1 -0.0337135261421701 0.749153849105426 0.0496139016199966 0.384452212440125 CCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATAATGCTAAAGCTGAAACTCCAGTCCTTCGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGACAGGAAGAGAAGGGGACGACAGAAGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGATAGGGAGGCCTGGCGTGCTGCATTCAGGGGGTCGCGAAGAGTCGGACACGACTGAGCGACTGATCTGATCTGATCTGAAGAGTTAATACAGTGTTTAATTATTTCATTTATTTGCTTGTTTTTAGGTATCCTTCTTTCTTCTCCTATTCCCCATTCCACACTAGATTCTAAGTTCCAAAACACAGGGACCGGGTCTCTATTCCTTGTTTTATCCTTAATACCTACCATAGATGCTCAGTGTTTATATTACTGGGAAAAATAAAGAGGGAGGGCGGGGGGTAGTTTCACCTCCGCAACTTCAACTTTTAGTTACCTTGAAAGTTTGCATAAGTGGTCAGCGTTGCCTGGAGTGCTTTCCCCTTACTTTTCTGACTGGGAGCTCATATTAATATTTAAAAAGAGAGCTCAAAGATCTCTACCATGCAATCATTCTCAACTTCTTTCTCTTTCCAGTCATCTTCCTTCCACGACGAATCTAAATGTCTGTAGGTGCTTCTGTAGCTGTTACACATTGAAATAATGTGTTTGTTTACTTGGAAGTTTTCCTTTTCACTGTAAGCGGGTGCACTCTGCTCTGGGTTGTATCCTCCACTCCTAGAAAGGTGTGTGACATTTAGTTAAGACAAACATAGGAATTACGGAATCCACAGCCCCACCTGCGGTTTTGACATTATCTTTCAAACCCTCATACAAGGTGACTTGAGATAAAGGAGCCTTAGCTGCACTGGCCTGGGAAGCTAGAGAGAGATCTCTTTTCTAGTGGTGATATATGGCCACTAAGTATTCGGGTGAACTGAGTATTTTGAAATTAGTAACAAAGTCTAGGACAAAACGTTGACCAGACTCCTGAGGGAGCAATAGTGCCCGGAGAGGTGTGCCAACAGTTTTTCTCTACCTTTTCCCCTGTCTATCCCCTCCAGGCTCCCCCCACCCACCTCCCCCAGGCTCTGAACAGAGGCCAGCTAGGGCTTGGAAGGTTTGAAGTGGGCAGAATCAGTTTAGCCTCGGAAAGTGGCTCCGGCAGTTCAACAGTCTCAGGCGGAGTCCGAGCCCAGATTCGGGTGAGCCCTGAGAACCGCCGGGCGTCCATGCGGCCTCCGGGGCGGCAGGGGGCGCCCCCGGCCGCGAGCCTCTGCCCAGCGGCCGCAGTGGGGCGGGGCCACGCCCGGCCGTTGGCGAAGGGCGGGCGGAGGGCTCGGCCTGAGAGGCGGAGCCCGGGTGGCTTGTCACACCGTTCCCGCGCTGGGCGACTGCCGTCGCTTCTTCGGACCGCGGCTAAGAGCCTCGCTAGAACGCTGTGCTGTTCCCCGACGCCAGACCGCTTAGCTGATATCTTCAAAATGGCTGATAATTTGGATGAATTTATTGAAGAGCGAAAAGTCAGATTGGCCAGAGACAAAGCAGAATTGGAAAGTGATCCACCGTACATGGAAATGAAGGGAAAAGCATCAGAGAAGCTTTCTGAAAACAGTAAAATATTAATTTCCATGGCTAAGGAAAACATACCACCTAACAGTCAACAGACAAGGCGTTCTTTAGGAATTGATTATGGATTAAGTTTACCACTTGGGGAAGAGTATGAACAGAAGAAACATAAACTGAAAGAAGAATTGCGACAAGATTACAGACGCTATCTTACTCAGAAAAATTTTCTATCCACGAGTGAAACAGATCCATCTACTCTGGGAGTTTCCCTTCCTATTGGTGAGAGGTTATCTGCTAAGGAAAGGTTGAAACTTGAACGTAACAAAGAATACAATCAATTTCTCAGGGATAAGGAAGAATCCACTGAAAAGTTCAGACAGGTAGAAAAGAGTACTGAGCAGAAGAATCAAAGAAGTAAAAAACCTATCAGTCAGGTTAAACCTGATTTACCTTCACAAATACAATCATCTTTCGAAAATTCAGAGGGTCCTAGAAAAGATGTCTTAACTCCTTCAGAGGCATATGAAGAACTTCTAAACCAAAGACGACTAGAAGAGGACAGGTACCGAAAATTAGATGATGAAATTGAATTAAGGAACAATAGAAGAGTCATTAAAAAGACTGATGAAGAAGTGGGCGTTTCCAGTAAAAAACATCAAAGGTTTGACAGCACGACTGACATTCCAGATAGAAGATTTCACAGGTTTAATGAGGATCTTGCTTTTGATAAACAGTCTTACAGACCAGGCTATGATCCAGAAGTAAGTGAAGACATGGATGAGAGGTTTAGATATGAAAGTGATTTTGATAGAAGACTTTTGAGAGTTTATACAAAAAACAGGATGTACGGGAACAGACGAGGCAATGAGCCTCCTATGGAGTGTGATGGTGATGTCACAGAACAGTCAAACATACGAATTTCATCTGCTGGAAATCAAAGTGCTCGAGACAATGAACCATCCAAACCTACTTATCGAGAGACATGCAGTCCTTTTGCGGGAATGCTCTTTGGGGGTGAAGATCGAGAACTTATTCAGAGAAGGAAAGAGAAATATAGACAAGAACTATTGGAACAAATGGCTGAACAACAGAGGAACAAGAGACGAGAAAAAGATTTGGATCTCAGGGTTGCAGCTTCTGGAGCACAAGACCCTGAGAAATCGCCTGATAGACTAAAGCAGTTTAGTGTGGCACCAAGACACTTTGAAGAGATGATACCACCTGAGAGACCCAGAATAGCTTTCCAGACACCTCTCCCTCCTCTGTCCGCCCCATCTGTCCCACCCATCCCATCAGTTTACTCCATCCCATCTCAGAGTGAAGATGTGCACAGTGGACTCAGCAGCACTCTTGGTGACATGGTGCCTCCCAGAGTTGCACCTCTGCCTCCACCTCCCATGCTGCCCCCTTTGGCTGCGAACTACCGAACTCCTTACGATGACGCGTACTATTTCTATGGGGCCAGGAATACTTTGGATCCTAGTCTTGCTTATTATGGTTCAGGGATGATGGGAGTACAGCCTGCTCCTGCTCCTTATGTTACAGCTCCTGTCACCCACCAGCCAGTACAGCCTATTGTGAGTACAGTTGGACAGAATGAGCTGAAAATTACAAGTAATCGAGCAATAAATTCAGGATTGTTTTTTGAAGATAAACCAAAGCCTTCAAAACAGTCATTTCAGTCTTACCAGGAAGCTTTGCAGCAGCAGATTCAAGAAAGACAAGAAAGAAGAAAGAAAGAACGTGAAGAAAAAGAAGTATATGAAGCCAAATTAGAAGCTGAAATGAGAAGTTACAACCCCTGGGGGAAAGGTGGAGGTGGTGCTCCTCTGAGAGATGACAAAGGAAATCTGATAACTGATTTGAATAGGATGCACAGACAAAATATAGATGCCTACCATAACCCAGATGCAAGAGCATATGAAGATAAAAGGGCTGTTGTATCTCTAGACCAAAATTTAGCCACTTCAAATGCGGAGAACCAAGAAGATGCTGCAAATAAAAACTCAGGTCATATGCAATCACAGAGCTCTCCTTTTGCTCGGGGAAATATTTTTAGTGAGCCTCCAACTGAACTTCAAATTAAACAGCAGGAATTATACAAGAATTTTCTTCGTTTTCAGATTGAGGAAAAGAAGCAAAGAGAAGAAGCAGAGCGAGAGAGATTAAGAATTGCTGAAGAAAAAGAAGAAAAACGGCTTGCAGAACAGAGAGCTCGAATCCAGCAAGAGTATGAAGAGGAGCAGGAAAAGAAAAGGGAGAAAGAGGAGGAGCAAAGACTGAAAAACGAAGAGCTTATTCGGTTAGCTGAAGAAAGACGAAAAGAAGCAGAAAGAAAGAAGAAAGAAGAAGAAGAAAAACATAATCTACAACTTCAGCACTACTATGAAAGAGAAAACATGATTGGGGAAGATACAAAGCACTTGAGACAGCCTTCTCCTGTGGTTCCTGCTCTTCAGAATAAGATTGCAAGCAGACTCCAAAGACCTCCTTCAGTTGACAGCATTATAACTTCCTTTACTCAGGACAGTTCCATGTCCATGGCACAATCTCCTCCGGTACCTGCCAGGAAAAACCAGCTTCGTGCAGAAGAGGAGAAAAAAAATGTAATTATGGAATTATCAGAAATGAGAAAACAGCTTCGTAGTGAAGAGCGACGTCTGCAGGGGCGGTTACTACACATTGATAGTGACGACGACATTCATATAAGGAAAAGAGAAAGTTCCATGGATGTATTTGATATGGCCAGACATCGATTACAAGCTCCTGTCAGAAGACCGTCACCTAAGAGCTTAGACTCTGCTTCTTCTCAGAATATTCATGACTTTAAGGAGCTGAAAGATAGAGATTCAGAAACGCGAGCTGATCTGAAATCTATGTACCCAGATGATCCAAGAGATAATGACACCTTGGAGATAGAACAACAAGCCTTGCTAAGAGAGCAGCAGAAGAGACTGAATAAACTAAAAATGCAGGAAGTTGACTTGGATGCTGTCCCAAGCACTAAAGTACGGGACCACAGAATGTTTCCTAGTCTGTAAAATGGGATGATAGTACTTATCTCTG EMBV3_36002 ACTGCATCAAGTGAGGAAGAAACTGGACTCCCTGGGCCTGTGTTCTGTGTCCTGTACACT Gene GeneID:507536|CCDC44:XM_002696065:392_cdna Constitutive 0 NULL GeneID:507536 19 GENE CCDC44 NULL coiled-coil domain containing 44 EMBV3_13022 GCCCAAAGATTTGCAGCTGAGGAATGCCAGGAAGCTGCTTTAAAGAATAAAAAAGAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06001 CTCGGGAACATGAGCGAGAAGCTAAGAAAATTAGACAGATGTTGTCTGGGAAGCTGCAAC Gene BVV0102_250695 + 1 EMBV3_39927 GK000005.2:15013540-15546052 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190968 TCONS_00190967 1 XLOC_116776 NonCoding TCONS_00190967 XLOC_116776 NonCoding NonCoding LOC100847746 5:15078752-15262465 j TSS143190 561 4 TCONS_00190967_1 44 0.0570409982174688 3 0.996962637171225 3.18662118043456e-05 0.000573172735243468 1.64955350543687e-05 1.48013421011071e-05 5.02721996055948e-05 4.26058185438279e-05 2.07904392396421e-05 0 0.000222696219477858 0 0 0 1.02291730159523e-05 0 0 0 0 0 0 0 0 0 0 0 1.23496119768387e-05 0 2.08876808369152e-05 0 0 0 XR_231040.1 LOC100847746 PREDICTED: Bos taurus uncharacterized LOC100847746 (LOC100847746), 0.0 652 100.00 0.641711229946524 0 noncoding GAAGATTCTTAAGCATTGGACCACCAGGGAAGTCCTACAGTGGATTTTTTAAAGACAAGTGATGTGAAGGCGTGATATCCAGAGCTGTGGCAGCCTTCTCGGGAACATGAGTGAGAAGCTAAGAAAATTAGACAGATGTTGTCTGGGAAGCTGCAACCTACCTTCCAGTTCTGTGAAATAGTGAACTATTTCATTGATCAGGAATGGACAGATAAATCACCAGAGAAGATAGACAACTGCGTGAATATTGATGATGATTCCTGGTATTAACACTTAAAAGTTAGTAAATATTGCATGCTGTTCAATTTCATCAAATTACACTTATCTGTTTTATTTTTCTTTTAAATGCTAAAAATAGTTGAAAAATAAATGTTTTCATGGAATCATAATGCTAGAAAGGACCTTAACAGTTTTGCATTTCCCTTTGCATTCAAATGGATTTTATCGAAGACTCTCCAAATTGTTATACACTAATAGATATCATTTGTAAACATATTTATATGTATTTATATAATGTTATAATTCTTTATAGCTAATAAAATATATTACAATTTTTTCCTA EMBV3_17496 TACTCATTCGTGTCTTTTGTAGCTGGAAGACTGACTAAGGAAAACCACCCTGTGCCAGAG Gene GeneID:504824|NARS2:NM_001098867:10_cdna Constitutive 1 NULL GeneID:504824 29 GENE NARS2 MGC152259 asparaginyl-tRNA synthetase 2, mitochondrial (putative) EMBV3_26886 TCCTCCCTTTGACAATGACCTAGATTACCCAGGAGAACGCCAACAAATCTCCAGCACCAG Gene GeneID:616356|HTR1E:NM_001112674:38_cdna Constitutive 0 NULL GeneID:616356 9 GENE HTR1E NULL 5-hydroxytryptamine (serotonin) receptor 1E EMBV3_23438 CTACATGGTAGAGAGCAACTTCAGCAGCTACCACCAGTTTCTGATGCAGGCGCTGGCGTA Gene GeneID:529919|LOC529919:XM_002692597:356_cdna Constitutive 0 NULL GeneID:529919 14 GENE LOC529919 NULL similar to mCG2797 EMBV3_43253 TTCAATTACATCGAGTTCACTCGAATCCTTAAGCATGGAGCGAAAGACAAAGATGACTGA Gene GeneID:614055|MYL12B:NM_001083764:176_cdna Constitutive 0 NULL GeneID:614055 24 GENE MYL12B MGC140363 MRLC2 myosin, light chain 12B, regulatory EMBV3_24079 ACCTATCAAAGCCCCCCTCCTCCAACACCATCAACTGGGAGTTAGGATCTCAACATAGGA Gene BVV0102_045406 + 0 NULL GK000003.2:16897813-16967601 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37281 CACCCAGCCAGACACGTCTATCCTGAAACCCGAGCTCCTGTCGGCCATTGAGAAGCTCTA Gene GeneID:507936|UBXN6:NM_001045986:188_cdna Constitutive 1 NULL GeneID:507936 7 GENE UBXN6 MGC137213 UBXD1 UBX domain protein 6 EMBV3_37435 CAGCTACCTGAGCCTGACGAGCAGCGACTGGAAATCGAAAGGCAGTTACAGCTGCGAGGT Gene GeneID:789205|IGLL1:NM_001083800:142_cdna Constitutive 0 NULL GeneID:789205 17 GENE IGLL1 MGC151892 immunoglobulin lambda-like polypeptide 1 EMBV3_33746 CTTCCATCCATTCCAGTCTCAGGCTCTTCCCTCTGCGTTCCCTCACACTTCAAAGCAGCC Gene BVV0102_424621 + 1 EMBV3_12885 GK000018.2:52660203-52732807 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31809 GGAGTCCTGGGTAAACGCCACCTCATCCACCCCCTATCAGAACATTCCGTGCAATGGATC Gene GeneID:539501|HELZ:XM_002696228:49_cdna UTR3_Alt 2 NULL GeneID:539501 19 GENE HELZ MGC127411 helicase with zinc finger EMBV3_40408 AAGGATCTGAGGGACAAGGTCAGCAGCTTCTTCAACACCCTCAAGGAGAAAGAGAGCCAG Gene GeneID:537301|APOA4:NM_001037480:104_cdna Constitutive 0 NULL GeneID:537301 15 GENE APOA4 MGC127813 apolipoprotein A-IV EMBV3_28803 GCAGACGTCTCCTCCAGTTTGTGGCTTGCATTTCACTTTCTCTAAGGTGTCTCCACGTCT Gene BVT0102_236741 + 0 NULL GK000015.2:78419773-78442312 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26113 TTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCACCATCCCAGTTCAGCAAGAAGTA Gene BVV0102_433542 + 1 EMBV3_25856 GK000004.2:2820521-3842580 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073419 TCONS_00090416 TCONS_00102424 TCONS_00187774 TCONS_00086675 TCONS_00088663 TCONS_00110364 TCONS_00013240 TCONS_00132043 TCONS_00089461 TCONS_00243948 TCONS_00098275 TCONS_00187485 TCONS_00253149 TCONS_00169479 TCONS_00135550 TCONS_00140493 TCONS_00174545 TCONS_00105301 TCONS_00056768 TCONS_00154252 TCONS_00230483 TCONS_00252175 TCONS_00172905 TCONS_00174541 TCONS_00056222 TCONS_00223066 TCONS_00201266 TCONS_00088024 TCONS_00013239 TCONS_00174540 TCONS_00169645 TCONS_00221594 TCONS_00102423 TCONS_00051487 TCONS_00238548 TCONS_00140494 TCONS_00057237 TCONS_00078983 TCONS_00169477 TCONS_00171161 TCONS_00013237 TCONS_00071867 TCONS_00207062 TCONS_00056482 TCONS_00169644 TCONS_00063500 TCONS_00119058 TCONS_00051488 TCONS_00099833 TCONS_00221131 TCONS_00226267 TCONS_00243949 TCONS_00053047 TCONS_00053048 TCONS_00169478 TCONS_00161897 TCONS_00211235 TCONS_00226268 TCONS_00107400 TCONS_00086676 TCONS_00132044 TCONS_00185693 TCONS_00171162 TCONS_00013238 TCONS_00071031 TCONS_00162452 TCONS_00031828 TCONS_00154251 TCONS_00010612 52 XLOC_045184 XLOC_055197 XLOC_061863 XLOC_113818 XLOC_052218 XLOC_053449 XLOC_066268 XLOC_008038 XLOC_080693 XLOC_054245 XLOC_150314 XLOC_058521 XLOC_113530 XLOC_156090 XLOC_103372 XLOC_081773 XLOC_085141 XLOC_104638 XLOC_062534 XLOC_034571 XLOC_094012 XLOC_139973 XLOC_155116 XLOC_104243 XLOC_034025 XLOC_136372 XLOC_122914 XLOC_052811 XLOC_103408 XLOC_134908 XLOC_031197 XLOC_145215 XLOC_035036 XLOC_047868 XLOC_103753 XLOC_043637 XLOC_125581 XLOC_034285 XLOC_038227 XLOC_072804 XLOC_060076 XLOC_134447 XLOC_137960 XLOC_031635 XLOC_098782 XLOC_129745 XLOC_063310 XLOC_111746 XLOC_042804 XLOC_099333 XLOC_018073 XLOC_006163 Coding TCONS_00119058 XLOC_072804 NonCoding NonCoding LOC100848861 21:29773433-29776318 = TSS89250 1054 3 TCONS_00119058_3 54 0.926944971537002 2 0.635228848821082 0.000503437518091544 0.000271708745837114 0.000276565618812286 4.33328803190004e-05 4.68423594046937e-05 0.000103510277923514 0.000122646825030631 8.32400278053164e-05 8.23447789634672e-05 0.00312504040097038 0.00162176020407817 0.00161052902615223 0.000236384771219254 0.00141849031290288 0.000294730978969639 0.0147719322494482 0.00319104090303542 0.00470752190350511 0.000654841515267252 0.000278605901718801 0.000123848402799171 0.00470538169822193 0.00430123960902965 0.00368350929784747 0.000122705383592742 0.000140374704507878 0.0020823003153368 0.00328054981297988 0.00374611996567832 0.00538002575172158 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 1474 99.76 0.778937381404175 NM_152473.2 ERVV-1 Homo sapiens endogenous retrovirus group V, member 1 (ERVV-1), 6e-10 69.8 73.64 0.114800759013283 0 noncoding 1 0 1 1 -0.413014337539021 0.0132539193620166 0.541912349801995 0.00143639346602512 AGAAGCCTCAGATATCAAGTAGTGCTGATGGAAAGTCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCTACCCTCCTGCCTACCCCCAAGGGCTCTGTCCCCTTTCACTCTTGCCTAGAAACCTGCACCACTGGACAAAACCCTGAGAGGGATTGTCTGAAGATCCTCTGACCAACCCTGAGGAAATCCGATACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCAGGATATGCAGGTCAACAAGCTACAACGTGCAGCGCCAGTTCAACAAAGATACAAAGCACTACAGCCGACCACGGAAAATATCACTCACCCTTAGATGGACACCACTATAAGGACTCTGAGGCCTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCGCCGTCCCAGTTCAGCAGGAAGTAGCCAGAAAGACCTCGACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGTAATGTTAGGTAGTTAGAATAGGAAACATGTCCAGAATGGCGGTGGCTAAAAGACAAGGAAGGGAAAAGCCCTCGAAAACGGAACAAAGGAAGGTCCAAGGACTTGAGTGAGGACCTCGGGTAGAACAAACAGGACTCCTGGCCAGCCCAATTTACACAGGGCAGGCCCAGGGGGAGGAAAAAACATTAAAAAAGAGGAGCCAAAGGGCCAGGAGTCTCTCTCCCCCCCACGCGTTCATTCTCTCTCTCTCCTCTGCGATTTTGGGTCGACATGGCCTCATGCCTTGAGGATGTATTTTCCTGTTATTTTCTAAATAAAACTGATCTGTAACACAGAGCTGTAACACTGATCTGTCCAAGAGCTATAACACGGTCTGTTTGAGACCTGAGAGCTGTAACATGGTCTGTCTGAGAGCTGTGACATGCCGAGGGCTTTAATGTCTGTCACTTCAAATTTTTGTTGAGACAGAACCGAGACTTCACTCCCCTGACAATTCCACATATAAGAGTTGCCTAATCAGAGCTCAGAGGAAGGAGCTGTTATGTCCTCTTACAAGAATGAGCATT EMBV3_41655 GTGAGAAGTAAGCAGAGCCAATAGAGAGGCTTCTGGGGAAGGTTTTGTAGCCCTATACCC Gene GeneID:505267|MFNG:NM_001101051:173_cdna Constitutive 0 NULL GeneID:505267 5 GENE MFNG NULL MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase EMBV3_37067 GAAGCCATCTTCATTCTGGCACGCGCCGCGGAACTGTTTGTGGAAACCATTGCAAAAGAT Gene GeneID:613730|POLE4:NM_001101225:57_cdna Constitutive 2 NULL GeneID:613730 11 GENE POLE4 NULL polymerase (DNA-directed), epsilon 4 (p12 subunit) EMBV3_34502 GGCATCGCAAAGAGAAGAAGGAGCTGCAAGATCGATTCTGTTGCTGTTAATATTTCAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22870 CAGAATAGCTTAGGCCAAAAAATGGCTTCTGTTCTCTTCCTCAGCGGACCCTCTACCTCG Gene BVV0101_042222 + 0 NULL GK000023.2:45041769-45093668 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40197 AGTCCATTTTACCAGTATTGGGAGAGGAAGCTTTCAAACACGCGGCCAGCCAGAAAGACC Gene BVT0102_355164 + 0 NULL GK000020.2:32848727-33030482 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113737 TCONS_00113736 TCONS_00113733 TCONS_00113731 TCONS_00113735 1 XLOC_069110 Coding TCONS_00113736 XLOC_069110 Coding Coding OXCT1 20:32700313-32849801 j TSS85014 3145 1 TCONS_00113736_1 410 15 0.979061724430887 2.33162688677918e-07 2.0768958280865e-12 0.000370728465429044 0.000147141708042972 0.000216639811402519 6.19772838182055e-12 3.21138196522399e-05 1.54615485391561e-09 0.000493088531563599 6.02152652213137e-09 2.78394095122362e-10 8.42995591081974e-10 8.09539036300896e-05 8.68422512809435e-05 7.86869318055363e-06 0.00125492030497126 5.3949302359174e-15 0.00139469037552326 0.000254920599726161 0.000391541724800132 5.18955133104255e-10 4.70329910384372e-08 0.000703062969725766 0.00206216926407879 0.000376083177796838 1.86234246014549e-09 2.39943502797329e-10 0.000435773161795705 6.98895366895588e-05 0.000641870513998034 NM_001076070.2 OXCT1 Bos taurus 3-oxoacid CoA transferase 1 (OXCT1), mRNA. 0.0 3676 99.85 0.650238473767886 NM_000436.3 OXCT1 Homo sapiens 3-oxoacid CoA transferase 1 (OXCT1), mRNA. 0.0 1912 86.53 0.514149443561208 TCONS_00113736_1 sp|P55809|SCOT1_HUMAN SCOT1_HUMAN Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial; 0.0 791 92.44 0.997560975609756 1 coding 0 0 0 0 0.0186035585630006 0.886289340091449 0.0153656973480748 0.775844358134572 ATGTCTTTATTTGAGAACCAAACATGTGGTTGACAACTTTGGTTTGGGCCTTTTACTTAGATCCAAGCAGATAAAACGCATGGTCTCTTCCTATGTGGGAGAAAATGCAGAATTTGAGCGACAGTATTTATCTGGCGAATTAGAAGTAGAGCTGACACCACAGGGCACGCTTGCAGAGAGGATTCGTGCAGGTGGGGCTGGAGTTCCTGCATTTTACACCAGCACAGGGTATGGGACCCTGGTGCAAGAAGGGGGGTCACCAATCAAATACAACAAAGATGGCAGCATTGCCATTGCCAGTAAGCCGAGAGAGGTGAGGGAGTTTAAAGGTCAGCATTTTATCTTGGAGGAAGCAATCACAGGGGATTTTGCTTTGGTGAAAGCCTGGAAGGCAGATCGAGCCGGAAACGTGATTTTCAGGAAAAGTGCAAGGAATTTCAACTTGCCGATGTGCAAAGCTGCAGAAACCACAGTGGTGGAGGTTGAAGAAATTGTCGATATTGGATCATTTGCTCCAGAAGACATTCATATTCCTAAGATTTATGTACATCGCCTTATAAAGGGAGAAAAATATGAGAAAAGAATTGAGCGTTTATCAATCCGGAAAGAGGAAGATATAAAAACCACATCTGGTAAACCTGGAGATAATGTCAGGGAACGTATCATCAAGCGGGCAGCTCTTGAATTTGAGGACGGCATGTATGCCAATTTGGGCATAGGAATACCACTTCTGGCCAGCAACTATATCAGCCCCGATATGACTGTCCATCTGCAAAGTGAAAATGGAGTCCTGGGTTTGGGTCCATACCCATTAAAAAATGAAGTTGATGCAGATCTAATCAATGCAGGCAAGGAAACAGTTACTGTTCTTCCAGGAGCCTCTTATTTCTCCAGTGATGAATCATTTGCAATGATTAGAGGGGGACATGTCAATCTGACAATGCTAGGAGCCATGCAGGTTTCCAAATATGGTGACCTGGCTAACTGGATGATACCTGGAAAGATGGTGAAAGGAATGGGAGGGGCTATGGATCTAGTGTCCAGTGCCAGAACCAAAGTAGTGGTCACCATGGAACATTCTGCAAAGGGAAATGCACATAAAATCATGGAGAAATGTACATTACCTCTAACAGGAAAGCAGTGTGTCAACCGTATCATTACTGAAAAGGCTGTGTTTGATGTGGACAGCAAAAAGGGTCTGACTCTTATTGAACTCTGGGAAGGCCTGACAGTGGATGACATAAAAAAGAGCACTGGGTGTGATTTCACAGTTTCACCAAAACTCATACCAATGCGGCAGATCTCAACTTGAAATGTGTAGTAAACCTTTGTTCTAGGCCTTGTGCTCTTCATTTCAACCACATAGGAGTTTATTAGGACATCAGTAATCATAATTGTATATCTTACAGTTTTTGTCTAGTTTTCTTCTAGTGTCTTAGTGCTTTTATAGCCATACAGATTTTGTTCTCTCCAGCGTGCTATGGCATTTTAATGAATAACCAAAAGGAAAAATATATATGCTTAGCTTATTTGTTTTATAAGTGCTGAGAAGGTCATATTTACAGTTGGTGCTCACATTGGATTTATCTTCATCTTCTGTGGTAGGTACATTAAATTGTGCACAATTTGTACCAAGATGGGCCCTTAGGGAGAGTTTCATTGGTATACTTTCCCTCCTAACTAAATCATGACATGTAGAAAAAAAGGAGGGAGGAGAAGAACTCCACTCAGAGTATACCCAGGGCAGCATTGTTGTAGTTCTAAAAGATAACATTTGTGTGGATTGAATTAGGAGAAATGTTGTCTTAAAGATCAGGTTTTTCCTTTAGCCTTCTCTGTCTTTTCTTTTGGAGCCTCTGACTTTGTGATTACATCTTAGTGCATCCCTTCTCCATCCCCACTTTTGGTAACTAAAATAAATACCCAAGAAGGCAAACAGGAACATCTCTGTGTGAGAGAAGTAACCTGGTTTGTGGGAGAGACCAAATGGTATAGAGTCTATTGGTGCTAACATCCAACCAAGAAGTTGCCTTTATAAACAAACCAAATAAATACCTGTGCTTTGCCAAAGATGACAGTTTTTTTTTTTTTTTTTTTAAGGAAGACAGCTATAAACCTAACTGATTAGTCAGTTTTCTCATTTTCAAACAGTACAGTATTCCTGTGTATCCAGAAAGATCCTTAGAAGTCTTTCTCTATGGTATTGTGGGCTTCTTGTATAATACCTCCTCTTAAGGTAAGAGGAGCTGTAGGGTAATTTATCATGAACCTGCAGTAACAGTGACCGGAGAGGTTTAGGTTTTTTTTTTTTTTTTTTTTTTAAGAATTCTTTCTTTTCAGGGTCTCTTTTTTCTTCTTGGGAAAGTTTCTAAATATTGAATGCCTTTTTCTACAGAACAGTGTTCTTTATTCTGCCCAGGATTCTTCCTTGAACAAAATACTTTTTATTCAGCTTTATCAAACTAGGGAAAATAATGATGAGCAAATCCAGGATTTGAAGTGCAGTGAACTTCATCCTTAGAAAATAAACATGGTAGATTAGATTTTGTAAGGACCTTCTCCTCCGAGGTATCCTCAGTTATCAAACAGTTCCCCAGGGGGTCTACCAAGCGTCCTGGGTATCAAATTGGAGAAAAGTCCAGGCACCCTGAAGACAGGCCAGATTGCTGTCCTCTGGACAGAGGTAGGCATGTTGTAGTGCAATATATCATTCCTCTCATACCAGATATAAGCATTTCTGCAAGTTTTTAGCTAATGGCTGTCATTAAATTCACTTTCTCTTCAGATACAGCTACAGTTCTGTCATTTTAGAGGAAGGAGAGGAGAAGCACACTCCATATATAAAATGGTCTTTCTGGCTGGCTGCGTGTTTGAAAGCTTCCTCTCCCAATACTGGTAAAATGGACTTTCTAGAGAATTTTAATGGTCTAGAGAATAATTTACATCTGTGTTAGAGTTATGGTTTGGAAAATGTATGACATTGATGGTTGCTGTATTTGTAAACTTACTTCTTCTGTGATTCTAAGAAAGCTCCTCATGTTGAGTGGCAAATTCTAAGTAGATGACTTTATATTCTTGATTAAAGAGTACCATAGGTGTTAGGAAATGCATTAAGAACTACAATAAATATTCCAAATGGATGTCG EMBV3_00807 AGAAGGTCCTGGGGCCTGGGTATGTGAAGATGGAGGTCTTTCAGGCTGGGGCTGGAGGTT Gene GeneID:536988|CAPN5:XM_002693484:111_cdna Constitutive 1 NULL GeneID:536988 15 GENE CAPN5 NULL calpain 5 EMBV3_06351 GCATTGGCAGTCCTCCTGAGACCTCTGACTTTTGTCATTGCCTTTGTTCCGCTCATTCTA Gene GeneID:788692|LOC788692:XM_002693365:315_cdna Constitutive 0 NULL GeneID:788692 15 GENE LOC788692 NULL similar to Olfactory receptor 52E1 EMBV3_37844 GACTCTGGTGGCACAGGCAGCTGTCGTAACAGGTAGTCCAAAAGGTCAAGGAAATGTTGT Gene GeneID:100295878|LOC100295878:XM_002692472:538_cdna Constitutive 0 NULL GeneID:100295878 13 GENE LOC100295878 NULL similar to elafin preproprotein EMBV3_42875 TGCACTCACTATAAACGCCCAAAATGCTTCCAGATGAGGGTGATAATAGTCTTGCTTTAT Gene GeneID:618298|TMEM182:NM_001083784:66_cdna Constitutive 2 NULL GeneID:618298 11 GENE TMEM182 MGC140262 transmembrane protein 182 EMBV3_08474 GTGTTTCACGAAGCTTAGCCCTTTACCTTCCCAGCTGCCCCACAGTGCTTGATACTTCTG Gene GeneID:359718|RTN4:NM_001075138:45_cdna UTR3_Alt 2 NULL GeneID:359718 11 GENE RTN4 MGC139261 reticulon 4 EMBV3_20338 CAGCCTGCAGTTGCCTCAGTTTATCATGTTTCTAGGATTGATGGTGGAATAGGGAGTTCC Gene BVV0101_006828 + 0 NULL GK000005.2:56707111-56712796 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191953 TCONS_00191949 TCONS_00191956 TCONS_00191950 TCONS_00191952 TCONS_00191951 TCONS_00191960 TCONS_00191957 TCONS_00191958 TCONS_00191959 TCONS_00191955 TCONS_00191954 TCONS_00191962 1 XLOC_117065 Coding TCONS_00191953 XLOC_117065 Coding Coding TMEM194A 5:56687953-56709258 j TSS143749 2949 1 TCONS_00191953_2 248 10 0.86204468644386 0.00238361298031548 0.00205139709732614 0.00105787329017208 0.00246125575813743 0.000788302123977351 0.00021554122994464 0.00159125254821197 0.00143157280932627 0.00220936056083552 8.94230775214616e-05 4.07093825550196e-23 1.98039609539061e-141 0.000317798498928522 0.000179258762219992 0.000409528998188484 1.26300158767114e-38 2.26888225217741e-110 0.00126129682478695 0.000784522377845717 0.00181286335276878 0.00183753610470656 0.000331441462444792 4.57581173643012e-14 0.000348512231304499 0.000411804610235739 0.00140772283235325 0.000453976177571235 2.56031913679622e-08 2.03282144961929e-05 6.143203232402e-20 NM_001102161.1 TMEM194A Bos taurus transmembrane protein 194A (TMEM194A), mRNA. 0.0 1494 99.88 0.281451339437097 NM_015257.2 TMEM194A Homo sapiens transmembrane protein 194A (TMEM194A), transcript 0.0 1287 77.50 0.574771108850458 TCONS_00191953_2 sp|A7MBC7|T194A_BOVIN T194A_BOVIN Transmembrane protein 194A; 5e-178 502 100.00 0.975806451612903 1 coding 0 0 0 0 1.61595430152487 0.052686093156513 -0.178477978157441 0.0207988764838357 CGCATCAGTTGCTAAGAGGCGGGACTATAGGGTGCAAAAAGGACTGTGTGCTCGAAGCACCGCCCATCCGATTGGGTGATAGGGGGCGGGCTTTGTAGCGGATAGGCTGCTCGTCCTGCCTGTTCCGGCCGGAATTGATTTAAACGTGGTCACGCTTCGGGAATCCGAAATTCTTTTTATGAATACCAGTCGACAATCCTGTTACAAAAATGTGCTTATCCCAAAGTGGCATGATATATGGACACGGATACAGATCCGGGTAAATAGTTCCAAACTGGTACGAGTCACCCAGGTGGAGAATGAAGATAAACTGAAGGAGCTAGAGCAGATTTGACCCCAAACTCTTCCTCATTTTCCTCCTTGGACTTACGCTGTTTTTTTGTGGAGACTTGCTGAGCAGAAGTCAAATCTTCTACTATTCTACTGGGATGAGTGTGGGAATTGTGGCCTCTTTACTAATCATCATTTTTATAGTATCCAAGTTTATGCCCAAGAAAAGTCCCATTTACATCATCCTGGTAGGAGGCTGGTCCTTTTCTCTGTACCTCATTCAACTAGTTTTTAAAAATTTACAAGAGATCTGGAGGTGTTACTGGCAGTATCTTTTAAGCTATGTGCTCGCAGTTGGATTCATGAGTTTTGCAGTCTGTTACAAGTATGGGCCTTTGGAGAATGAACGAAGTATCAACCTGCTGACCTGGACCTTGCAGCTGCTGGGCCTGTGTTTCATGTATTCCAGTATCCAGATACCACACATTGCCCTTGCCATTGTCGTCATTGCACTGTGTACTAAGAACCTGGACTACCCTATTCACTGGCTGTACATCACCTACAGAAAGATGTGTAAGGCAACAGAAAAGACTGTCCCCCCCCGTCTTCTGACAGAAGAAGAATACCGGCTACAAGGAGAGGTGGAGACCCGAAAGGCTTTAGAGCAGCTTAGAGAATACTGCAACAGTCCAGACTGCTCAGCTTGGAAGACTGTTTCTCGAATTCAGTCTCCAAAGAGGTTTGCTGACTTCGTGGAAGGTTCTTTCCACCTCACACCCAATGAGGTTTCTGTTCATGAGCAGGAGTACGGCTTAGGGAGCATTATTGCCCAGGACGAACTCTCTGAAGAAACATCCTCTGAGGAGGAGGACTCAGATTCTCGTTACATTGCAGCTTCAGCATAGTCTTGTCTCTCAGACCGATCTCATCAGGAAGGATTGAAGGGATAACTGGAGTGAGCTGGACGTCAGAGCCCTCGTCTGCCGCCACGTCAGCGTCTTGCTCCACAAATATCAAGCTGCAAATTGGCCCTTGGAGTCAGGGTCTCATCAGCATCAGAAATCTATGGCCTCTAATGGATCTGATCAAGTTATATAGAGCATGCCTCCCATTAATGGGAGTACAAGTCAACTGGCTTAAAACACTTTCCCTTCACTTTTCCAGTCAGATTGCTTTCATGAGACCAATGGAACCAATGACTGAAAATATGGAAAATTTAGCACTTTTGATATCTTCTAATAAGAAATACTATCAGCCACTTCATGCCCCAAAACTAGTTTATTTCTCCCCCTAAATTCATGACTTTTATATTCTGTTGCAGAATTTTGCTGATGATACACTTTTGAGTACTGATTTTGTGCTGATAAAGTCCATTCTAGGGCCCAGCCTTTTCTTCACTGACTTGTGTTCCCTTCAACCCAGTCCCCACTTTGCATGTATGATAGACAGTTGATGAAGGAAAGCACCCAAATAGGCTAGATAGTTCCCCAGGGCCTGATTTCCGTAAAAGGCTTGGGAATGGATTATGCAATTGCCTTTCATATTTTTGTGGTTCCAGAAAAAAAGATGGGCTCAGATGGATGCCTGTGTAAAAATGGTTCCTAGCTATGTACTCAGAAGTTTTCTCTGAATTGAGTAGTGAAAGTTGAAGTAGGAGGAAAGGAAATTAAATGTCCTAGTATTCCTTTGGACTCAGGTCTGACATGACATATGAGATAATAACCTATATTGAAATGCCAAGAATTTTATCTGAACCAAGGAGAGGACAGTTTGACAGATTTATTATGCCTTCATGTTACATAGGCACTGAAACAAAGTAATAAACATAAAATAGCCATTGTGCAAGGCAAGTGCACCTAAAACTTTTTGTTTATGTTTTGATGTAAAAGAAATTGATCATTATTTTTTTAGGGAAACCTATGCAATTTTGGTGATCCAGTGGTGTCTCTTGATAGCTTATGGATTCAGTTGCTGTTGAGGTAGATTCTAGACAGTTATTAACTTGAAAAGGGAGTTTGGTGCCTTATATGATGGGAGCCAGAACCTGCTGGGAATAAACAAAGCGAATTCACACCAGTGTCAATGCACAGCTTTAGCAGGAAGGAAATGGCACACAGCACCCCCAGATTTGGGGCTTTTGGCTCCCACACCCCCTGCCCATGTGCATCATCATCCTTTTCACACTTGACAATAACTTGAAAATGGTGAAATCACTATCTCTGCATTTTTCTGCAACATGGGCAATGTTCTTGTTAACATAATAGGTAGCTCTTAATGTAAGTATTAGAACTGTTACAGCCTGCAGTTGCCTCAGTTTATCATGTTTCTAGGATTGATGGTGGAATAGGGAGTTCCTGGGTAAGTTTTAGCCTGTGGGTAATGCCTTAGAGTTATTTTAAAAGATTTGTCATTTATATTTAAAATAAGTGTTCATGAATGTTTGAAAGGAACAAAATGATCAGGGATGACTCTTTGCCATGGGTCTCATTTTCACTCTTTTCTGTAAGAAAAATAAGCAATGTCTTATTATATATTTTTTCATTTTTATTGTTCAAGTTTGTAAGTAATCCCAATTTTAATAAAGTTTTATATACTATGTAGTGGTTTCTCTTAATGAACATGTGCTTTTCTTGTTAGGATCTCTTGTCTTCAGGTAATCAGCAATTAGCTCTTCTGGTT EMBV3_20396 AGGGCAGCAATGGAGTTGCAGACATGGAGAATGCAGGGGACATGCCTACGGCTGATTCAT Gene BVT0101_029908 - 1 EMBV3_04107 GK000016.2:1335060-1398309 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30504 CAACAGCCGCCTTTCAGTGGTACGAAGCGTCTGCCTGGGGCATTTTAAGTCCTGTCTCCT Gene BVT0102_086786 + 0 NULL GK000025.2:33439591-33567666 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146889 1 XLOC_089239 Coding TCONS_00146889 XLOC_089239 Coding Coding CLIP2 25:33566003-33619646 = TSS109723 5518 1 TCONS_00146889_4 1047 16 0.897431117408001 0 0 8.65128401970991e-11 0 0 4.4434948210684e-11 1.90233878487314e-05 7.84774429294592e-11 1.02095546398711e-10 2.98259816985461e-06 4.14857881857982e-07 0 0 0 5.18449573019681e-11 0.00163217440815113 0 0.000145507312906102 0 0 3.43212745854052e-11 9.01024159190415e-05 7.14904706025976e-05 0.000236966909052264 0 7.94442839703235e-11 5.64640764436761e-11 1.06693652006847e-10 0 3.26870886282569e-05 XM_005225046.1 CLIP2 PREDICTED: Bos taurus CAP-GLY domain containing linker protein 2 (CLIP2), transcript variant X1, mRNA. 0.0 9324 100.00 0.936752446538601 NM_003388.4 CLIP2 Homo sapiens CAP-GLY domain containing linker protein 2 (CLIP2), 0.0 4731 84.35 0.781623776730699 TCONS_00146889_4 sp|Q9Z0H8|CLIP2_MOUSE CLIP2_MOUSE CAP-Gly domain-containing linker protein 2; 0.0 1862 90.85 0.999044890162369 1 coding 0 0 0 0 -0.118736625944539 0.498114212052699 0.0214353430553375 0.664603366995591 ATGCAGAAGCCCAGCGGCCTGAAGCCCCCCGGCCGTGGGGGGAAGCACTCAAGCCCCATGGGTCGGACGTCCACTGGGTCAGCCTCGGCCTCGACCACCGTAGCGCCCACTGGCTCTAAGGAAGGCTCCCCCCTGCACAAGCAGGCTTCGGGCCCCCCGGCTGCGGCCCCCGCTGCCCCCGAGAAGCCCGGCGCCAAGGCGGCCGAGGTGGGCGACGAGTTCGCCGGGGACTTCGTGGTGGGCGAGCGTGTGTGGGTGAACGGCGTGAAGCCGGGCGTGGTGCAGTACCTGGGGGAGACGCAGTTCGCGCCGGGCCAGTGGGCGGGCGTGGTGCTGGACGAGCCGGTGGGCAAGAACGACGGCGCGGTGGGCGGCGTGCGCTACTTCGAGTGCCCGGCCCTGCAGGGCATCTTCACGCGGCCCTCCAAGCTCACGCGGCAGCCCGCGGCCGAGGGCTCTGGCAGCGACGCCCATTCGGTCGAGTCGCTGACCGCCCAGAACCTGTCGCTGCACTCGGGCACCGCCACGCCGCCGCTCACCAGCCGCGTCATCCCCCTGCGGGAGAGCGTCCTCAACAGCTCGGTCAAGACCGGCAACGAGTCGGGCTCCAACCTCTCGGACAGCGGCTCCGTGAAACGCGGCGACAAGGACCTGCGCCTCGGAGACCGCGTGCTGGTTGGTGGGACGAAGACTGGCGTGGTGCGGTATGTGGGGGAGACAGACTTTGCCAAGGGCGAGTGGTGTGGCGTGGAACTGGACGAGCCCCTTGGGAAGAACGATGGGGCGGTGGCGGGCACCAGGTACTTCCAGTGCCCACCCAAGTTTGGTCTCTTTGCACCCATCCACAAGGTGATCCGCATCGGCTTCCCATCCACCAGCCCAGCCAAGGCCAAGAAGACCAAGCGTATGGCCATGGGTGTGTCGGCGCTGACCCACAGTCCCAGCAGCTCCTCCATCAGCTCTGTCAGCTCTGTGGCCTCCTCCGTGGGTGGCCGGCCCAGCCGCAGTGGCCTGCTCACCGAGACCTCCTCGCGCTACGCCCGCAAGATCTCAGGCACCACGGCCTTGCAGGAGGCGCTGAAGGAGAAGCAGCAGCACATAGAGCAGCTGCTGGCTGAACGGGACCTGGAGCGGGCTGAGGTGGCCAAGGCCACGAGCCACATCTGCGAGGTGGAGAAGGAGATCGCCCTGCTCAAGGCACAGCACGAGCAGTATGTTGCAGAAGCAGAAGAAAAGCTGCAGCGGGCCCGGCTCCTGGTGGAAAGCGTGAGGAAAGAGAAGGTGGACCTGTCCAACCAGCTGGAGGAGGAGAGGAGGAAGGTGGAGGACCTGCAGTTCCGAGTGGAAGAGGAGTCCATCACCAAGGGAGACCTGGAGACCCAGACGCAGCTGGAGCACGCGCGCATCGGGGAGCTGGAGCAAAACCTGCTACTGGAGAAAGCGCAGGCCGAGCGGCTGCTCCGAGAACTAGCCGACAACCGGCTGACCACGGTGGCCGAGAAGTCGCGGGTGCTGCAGCTGGAGGAGGAACTCAGCCTGCGCCGTGAGGAGATCGAGGAGCTGCAGCAGTGCCTGCTCCACTCGGGCCCACCACCGGCTGACCACCCTGAGGCCGCCGAGACCCTGCGGCTGCGTGAGCGACTGCTGTCGGCCAGCAAGGAGCGCCAGCGGGAGAGCGGCCTGCTGAGGGACAAGTACGAGAAGGCGCTGAGGGCCTACCAGGCGGAGGTGGACAAGCTGCGGGCGGCCAACGAAAAGTACGCGCAGGAGGTGGTGGACCTGAAGGCCAAGGTCCAGCAGGCCACCAGCGAGAACATGGGCCTCATGGACAACTGGAAGTCCAAGCTGGACTCGCTGGCCTCGGACCACCAGAAGTCCCTGGAGGATCTCAAGGCCACCCTGAACTCGGGCCCCGGCGCCCAGCAGAAGGAGATTGGGGAGCTGAAGGCTGTGATGGAGGGCATCAAGATGGAGCACCAGCTGGAGCTGGGCAACCTGAGGGCCAAGCATGACATCGAGACAGCCGTGCACGTGAAGGAGAAGGAGGGCCTGCGGCAGAAGCTGCAGGAGGCCCAGGAGGAGCTGGCTGCCGTGCAGCAGCACTGGTGTGCCCAGCTGGAGGTGCAGGCCAGCCAGCACCGGCTGGAGCTGCAGGAGGCCCAGGACCAATGCCGCGACGCCGAGCTGCGCGTGCGCGAGCTGGAGAAGCTGGACGTGGAGTACCAGGGCCAGGCGCAGGCCATCGAGTTCCTCAAGGAGCAGATCTCCCTGGCCGAGAAGAAGATGCTGGACTATGAGCTGCTGCAGCGCTCCGAAGCCCAGAGCAAGCAGGAGGCCGAGAGGCTGCAGGAGAAGCTTCTGGTCACCGAAAACAGACTCCAGGCCGTCGAGTCCCTGTGTTCGGCCCAGCACACCCATATGATTGAGTCCAACGACATTTCAGGGGAGAAGATCAGGATGAAGGAGACTGTGGAGGGCCTGCAGGACAAGCTGAACAAGAGGGACAAAGAGGTGACAGCCTTAACATCTCAGACCGAGATGCTCAGGGCCCAAGTAAGTGCACTGGAGAGCAAGTGCAGGTCGGGCGAAAAGAAGGTGGACACCCTCCAGAAAGAGAAGCGGCGCTTGGAGGCGGAGCTAGAGGCCGTGTCCCGGAAGACCCATGATGCCTCGGGCCAGCTGGTCCTCATCAGCCAGGAGCTGCTCCGGAAGGAGCGGAGTCTGAATGAACTGCGGGTATTGCTGCTGGAGGCCAATCGCCACTCCCCAGGGCCTGAGAGGGACCTGAGCCGGGAGGTCCACAAGGCCGAGTGGCGGATCAAGGAGCAGAAACTCAAGGATGACATCCGAGGCCTGCGGGAAAAGCTGACGGGGCTGGACAAAGAGAAGTCCCTGTCGGATCAGAGGCGCTACTCCCTCATCGACCCGTCCTCATCCTCGGCACCGGAGCTCCTGCGGCTGCAGCACCAGCTGATAAGCACGGAGGACGCGCTGAGGGACGCACTGGACCAGGCTCAGCAGGTGGAGAGGCTCGTGGAGGCCATGAGGAGCTGCCCTGACAAGTCCCAGGCCATCGGCAATTCTGGTTCTGCAAACGGCATCCACCAGCAAGACAAAGGTCACAAACAAGAGGACAAGCACTGACCCTGAGGGACACCGTGGAGCGGCCCAGTCTGGACCAGAGCCCCTCCAGCCGGCCCCGGCGGCGCCCCCTCCAGGCAGGGGGCGGGACTGTCGCTTTGAAGAGGAGAACAGTATTTGTAACAATGATGTACCCACCGCCGTGGACAATCCCCCACCCCCGACCCCCTTGCCGGACCAGGAGGCTTCCTCAAGCACGATCTTCCATGGAGAGTACAGCCCTGGCCTGGCCTCCCGGGACCTGCAGCCTGGATGCCCTGGACACCCGGCAGTTTCTGGAGTTGGCTCAGGGAGGCCGGGGTGATCCGAACAGACCCCTCTCCCCAGAAGCCACTGCCCTGAGGACCGTCTTGGCCCCTGGGCGTGTCCCCACTCCCTTTCTTCCCCTCCTCCTGGGGGTCCCTCTCAGACCCCCGAGAGCCATTGTCCCAGGAAGGGGCCAGAGGAGGGCCCCAGCTTCCCCTTCAGGCACCAAGGAGAGAAGTCTGGTCATTTGGAGGCAGGAGGAGACCCCCTTTTCTGCAGCCTCTTCCAGACTAAGGCAGTCCCCAGGGCTTCTTGTCCCCACACACTGAGCCTCTTGCAAACAGTGGTACAAGTTCCCCTCGGCCCGTCTGCCCAGCAAGGCCCCAGGTTCAAAGTGCTGGGAGGTGGGCCCTTCGTTCCGACCCCAGCGCACACGCAGCTCCAAGCTGCTGATGTCCGGAGGGTGGTCCCCAAGGCCAGGAGCCACAGTATTAGGAAAGTCTGGAAGCCCCTTTCCTTCCCCCACCCATCCTCAGAGACCTGGCTTGGAGCTGGGACAGGGAGGTCACAGGGAGGCCCCAAACCAGCCGTTTGGGTGTGTTTTGACTGGTAGGTGGTATGCTGTCCCCCGGGTTGACTTGATGTTCTGAAACCAGCCTCCCACTGGCAGATTCACCCATGCTGACCCCGACGTATACAGCTTCTGACCGTTAGCACAGACACACTCAGAGGGGTCACACATGCACACATGCCGTGTGGATGGGACCTTTGCAGTCAGTCATGCTTGGACCACATGGACACTCACCCTCGGGCTCCAGGATGGAGCCCCAGGCCTGGCAGGGCTGCGATTGCACACACTACAAATGTGCCTGCAGCCTCGTGCACAGAATCAGCCAGGTACACGTGGGTGAGCCTTCAGGGAGGTGTGGCCATGCACATGCATCTGAACACACAGCCCAACAGCCGCCTTTCAGTGGTACGAAGCGTCTGCCTGGGGCATTTTAAGTCCTGTCTCCTGTAGCCAAGAAAAGAACCCAAGGATTGACTGGGGAAGACAAATCTCCCCACCTTCCCCCAAGCCTTCCAAGTTACTCCAGCCTCGTTTGTGATGGGAAAGCCAGCGTCTGCCCGAAGCCCCACCTCTAGAGCCGGGAGACCTACAGATGGTTGCCTTGCACTGCAGCGTCTCCGTGGAGGCCTGCCCCACCTCCCCCAGCTTACGGGCCTCTCTCCCTAGGGGTAGAGGGGGTGCCTGATGGGCCAGCATGGTGTTCCCAGTTGCACCAGGACAGGTATGCAGGTGGTGCCCAGGTCACCCCTGAGTGCTCCCAGGTACAGGTGGGTGGTCTTCACGTCCTTGCCCCAAAGCAGCCCACCCCGGGGGCAGCCAGTTAGTCCTATCGGCCCCTCCTCGCTCCCCGTTGGCTTTCAGTAGCTCTTGCATGCGGTTTCATTAACAACGGTCTAGAAGCAATGCTGTAGTGGCTTAACCCAGAGTCAAATACTACTCTTTCCAGCAAAATCAGGCAGCTGCCCTGCCCACTGGAGGCACTGATTAGTCTACTAACAGCCAAAAGCCCACTCTGAGAGGAGTTGAGCCCCCGGGATGGGCTGACAGGTGGCAAGCGCTTTCCCCATGAGCATCTGCGCCTGCCCAGTGTGTGCTCAGCCGTGCCCCTCCCCAAGCCCTCCTGCACCCTCCCCTTCCCTTCCCCAAAGTGGAATTGTTGAAGTGTGGCGAGTCCGTGCTCGAGACAATAAAGCTTGTGACTGAGGTCCAGGACCCCTGCAGTTTCTGCTTCTCTCTCTCTGGGCCTCCTGGCCTCCCCCCAATGTCTCCTAGCTCATGAACACCCAGGTGCCAGGAGTCTGACTTTATCCTGTTCTCCTGGTGGACTGATAGCTAATTCTTACTCAAATGTGAATGGCTAATGAAGGCCTCAGGGGGCCTGGTGTGGAACAAGTGTGGAACTGAGCTGCCTTGTCTGAGAAAAGGGAGCTCAACAAAAGCGGCAGAGAACCAGAGAAAGGGGGCAGCAGTGGAAGCCGGGCAAGGCTGCCAGAGAGGCATGAGGGTTTGGATTTGAATCTGTTGGAGATGTAAGTGGGCCCACAAGGAAAAATCGAAGTC EMBV3_31538 GAGACAGAGCCTGAAGAGCGACAATGGCTGCTGTATCCAGGATGGGTGGCTCCTTCCACG Gene GeneID:100125924|CTXN1:NM_001105494:261_cdna Constitutive 0 NULL GeneID:100125924 7 GENE CTXN1 MGC140107 cortexin 1 EMBV3_10046 TGCTGATCAGTAGTGGGATCGCGCCTGTGGATAGCCACTGTACTCCAGCCTGGGCAACAT Gene BVV0102_068707 + 0 NULL GK000010.2:42862900-42897048 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12365 AGTGGGTGTTTAAGTGGGTTAGGTGGGAGCAACCTTGAGAAACTTGTATGGCAAACTCCC Gene GeneID:534684|DSTYK:NM_001024824:85_cdna Constitutive 0 NULL GeneID:534684 16 GENE DSTYK RIPK5 dual serine/threonine and tyrosine protein kinase EMBV3_25966 CAGGAGAGAAAGCCCAGAGATAAACCCATGCATCTATGGTCACCTAAATGACAAAGGAGG Gene BVV0102_158724 + 0 NULL GK000018.2:49767876-49808327 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090677 1 XLOC_055457 Coding TCONS_00090677 XLOC_055457 Coding Coding - 18:49801680-49802040 - TSS68023 360 1 TCONS_00090677_1 50 0.997222222222222 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.09669631650729e-05 0.000279410538598669 0 2.44635284111798e-06 0 2.66810920638643e-05 1.34850259299354e-05 0.00018370705162258 XM_003586282.2 LOC540403 PREDICTED: Bos taurus protein FAM170A-like (LOC540403), transcript 8e-54 214 73.05 0.991666666666667 NM_001178101.1 ZNF37A Homo sapiens zinc finger protein 37A (ZNF37A), transcript variant 6e-24 114 68.37 0.855555555555556 TCONS_00090677_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-09 53.1 42.22 0.88 0 noncoding 0 0 0 0 -0.272281005053986 0.194539674735807 -0.00906094394795916 0.899640449533811 CTACAAAGGTACAATAATTAAGAGTATGATACTGGCATAAAAATAGACATATCAATCAATGGAACAGGAGAGAAAGCCCAGAGATAAACCCATGCATCTATGGTCACCTAAATGACAAAGGAGGTAAGAATATATTGGACTATATTAATATAATGGAGAAAAGCCTCTTCGATAAGTGGTGCTGGGATAACTGGATGGCTATATGTAAAAGAATGAAATTAGAATACCATCTAACACCATATACAAAAATAAACTCAGAATGGGACAAAAACCTAAATGTAAGACTGGACACTATAAACTCTTAGAGGAAAACACAGGGAAAACACTCTGACATAAACAACAGCAAGATCTTTTCTGATC TCONS_00086596 . 3' 6288 TCONS_00086596 . 3' 6647 EMBV3_01537 GAGGCCTTCGTTTGTAGAAGACCGTTGTGGCTTATGAATGCTGGATTAACACTAACTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33268 CCTGGGGACAGTGGTCACCAAGAACTCTACGTTAGAACACAAGGAAAGATCCTGCTCTGT Gene BVT0102_215532 - 0 NULL GK000011.2:71242729-71329771 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028287 TCONS_00025356 TCONS_00028286 TCONS_00025354 TCONS_00025355 TCONS_00028285 2 XLOC_015442 XLOC_014732 Coding TCONS_00028285 XLOC_015442 Coding Coding FOSL2 11:71319523-71334504 j TSS19878 6685 3 TCONS_00028285_3 219 0.0851159311892296 4 0.554005340453939 0.000168693539515916 1.62180803776296e-11 0.000117924518019326 5.7804319206358e-13 1.42152001148017e-22 2.17012223453295e-09 3.10948026461339e-09 6.92134498281485e-10 0.000317783194095201 4.10518557511572e-05 1.23171752873785e-05 1.24722226289462e-05 6.5966010453628e-13 7.2017188675115e-05 9.75450949252619e-05 0.00127189852778638 0.000608136595634844 0.00109831539086812 2.04192646228095e-05 0.00104732294105387 3.99165402329545e-05 0.00133992062585527 0.00035580296831403 0.00118122340902689 0.00027237992289102 0.000313522609201089 0.00024609017626919 8.82756665105381e-09 9.10268257580041e-05 1.31161155616507e-08 XM_005212961.1 FOSL2 PREDICTED: Bos taurus FOS-like antigen 2 (FOSL2), transcript 0.0 9117 99.96 0.756768885564697 NM_005253.3 FOSL2 Homo sapiens FOS-like antigen 2 (FOSL2), mRNA. 0.0 1983 82.01 0.295736724008975 TCONS_00028285_3 sp|P15408|FOSL2_HUMAN FOSL2_HUMAN Fos-related antigen 2; 5e-104 308 94.74 0.949771689497717 3 coding 0 0 0 0 -0.276414947179264 0.460316916739722 -0.0565581281583966 0.356934122119463 GTGTTGGGGAGGAGTAATTAGGCCGAGTTGGGAGGAAGCTGCTTAAGTGGGTGGGGCCAGGCCTGGCACAAGGGGACTCTCTGGGGAACGGTCCCAGCTCATTCTCTCGGGTCTTGGCACTGAATCAGGGCTGACATGTCACATGCTGCCATCATGCCTGGGCTGCTGTCCCCTGAAGAGGAGGAGAAGCGTCGAATTCGGAGGGAGAGGAACAAGCTGGCTGCGGCCAAGTGCCGGAACCGCCGCCGGGAGCTGACGGAGAAGCTGCAGGCGGAGACTGAGGAGCTGGAGGAGGAGAAGTCGGGCCTGCAGAAGGAGATCGCCGAACTGCAGAAAGAGAAAGAGAAGCTGGAGTTCATGCTGGTGGCCCATGGGCCCGTGTGCAAGATCAGCCCCGAGGAACGCCGGTCCCCGCCGGCCTCTGGGCTGCAGGCCCTGCGCGGCGGGGCCAGTGGAGGGGTCGGTGCCGTGGTGGTGAAACAGGAGCCCCTGGAAGAGGACAGCCCCTCGTCCTCATCGGCGGGGCTGGACAAGGCCCAGCGCTCCGTGATCAAGCCCATCAGCATTGCTGGGGGCTTCTATGGCGAGGAGCCCCTGCACACCCCCATCGTGGTGACCTCCACTCCTGCCATCACTCCGGGCACCTCGAACCTCGTCTTCACCTACCCCAGTGTGCTGGAGCAGGAGTCGCCGGCATCGCCTTCTGAGTCCTGCTCCAAGGCTCACCGCAGAAGCAGTAGCAGTGGGGACCAGTCATCAGACTCCTTGAACTCCCCTACTCTGCTGGCTCTGTAACCCAGCTCCCAGGGGCAGGGGTGGGGGTCCTCGTCACTGCCTCCTGCCCAGGGACCAGCACCTTCCAGCGCTCCGGGGCCGTGAGGAAAAGAGGGGGACCCTGCCAGAGAGCTTCCTGGCTCTGGGGAGACCCAGGTGGGATTTGGTGGTGAGTCGCCGGAGGACTTGGATGAGCTCTTGGAAGGCACAGGACCTCCTCCTCCCTCGTCCATCTCGCGAAGCAAATCCGTTTCTTGAAAAACATTGGAGAACTTGGTCTGGTGGACTCGGGCATCTCCCTGGCTTCTGAAGAGCCTGAAGCTGGTTTGGGCCATTCTTGTCCCTCAGTTCCGATGTGTCTCTGGAGTGATGGTGTCCTTCCCGCCCCACCAAGCATGCTCAATGCCTTTTTGTTTTCACCTTCCCTCTATTTGCCCCTTCCTTCCCCCAGTGTCAATTTCACTTCCTCTTAGTTTTTTATCGAATTTGCCATGACATTTCATCTGGGTGGTCTGAATAGTAAAGCTCTTCATTTCTGAAGAGGGGGCAGCAGGGTGACTCTTTGGCTGGGGCTGACTTGTCCAGAAGGGGACAGTCCATGTGCAATACAGAACCTTCCCTCCTCTGACACTTCTGGTCCACCACCATCTCCGGAACCGCCAGCAGGGCTCCTTGAACTCTCCAGGAGAGGCCACCATCGCCAGGAGGTTTGGAGGACCCTTCCTACCCATCCTCGGAGACGGCTTTTGGAGGAGCAGCTTGGCCAGAAGACAGGGTGTGAGTGAGACAGCGGGGGCACGGATTGGGTTTGCCAAATGCCTAATTACCAGGCCAGGAATGGCCAGGAATAGTGCCAGCGGGCCACACGGGTGTCCCAGCCAGCCTCTCTTCACCCCGTGTCTTGAATAGGACGTCTCTTGTAATTACCGCCTCGTCGTTCAGCCCTGGACCCTTCTCTCCTTCCTTCCTCGGAGCCACACGTCACTCCGAGTCCCTGCCCGCTCCACCCTCCCCCACCCTGCCTCTCAGGGTGACGCCGCCCGTGGAGGTTTAATGAGCGTGGGCCTGGCCCCTCCCCAAGCCTCAAAATCGCCTCTGCTGTGGATGGAAAGGAAGGGGGAGGAAGGAGGGAGGCAGTCAGAGTGGGGTTTGCCTCGCAGCAGCCCCAGCGCCTGCTTCTCACCTCTCACCAAGGTGCTGGGCCATGCTACCCTCTGTGGTCATCTGCTACCTGATGGATCTCGCGCTTGTTCTCTTACACTCCCCTGCCCCCTCACCCCAGTGTGCTTCCCAGGTCCACCAGCCAGCTGTGAACAGCTGGCCCAGAGCTGTTGTTGTGGCTTGCAGCTTATGTGCCATTCCCCAGGGGCTGCTGAAATCAGAGATGAATCCCACTGCAAGAGAGCTGCCCTTTCCTGTGGGGTGGAGGATGGGGAAAGGGGGTCCTCCAGCCACCCCCCCACCTCCTCCCGGGAGCACAGCTCCGCAGAGCTCAGCGGAGTCCCCGCCTGCCACCCCTCGGAGACTTTTTTTCTCCCCAAGGCTGGTCTTCCAGCATTGGCCTCTGCTGGCCTAGTACTCTGAGGGAGGCCCCGCTATTGTGATTCAGCTCTAGAGATCATTGTATGATAATTTAAAACTATATAGATATTATTTAAATCAACCCAGTGGGGGTTAAATCTCAAAGTTGGACTTGGGAGAGGGAGAAAACGTGATGACATGATTGCTCACCTGTTCCCTTCACAGACCCAGGCCTGGCACGCCGGCTGGTATTTAATGTTCATTACTCACTTGCCATGCCCTAGACACACTGAATGGAACAACCCAATGCCTAAAATACGCAGCCCACTATGACCGGGAGTGATGTGTGGAGGGGTAGGACTTGCAAAGAGAGGAGACTAAAAGAAACAGGATTTTCCCCCCAGATGCTTTAAATATGTTATTTCCCACATTCCTTGGCTGTGACGCTGCCCCCCAGTTCCCCAGAAGTTCTGGGAGGGGCGCTTCTAATAAGATGGGGCCTTTGGGTTTCTGGCTTCAGATTAATCAAGGACACAGAGGTCAGCTAAGAGTAGCAGGAGACAGGCAAAAAGAACTGGGGTGAACTCAGCTCTGAAAGACTTAATCATCTCAAGTGGTATTTGTGGCCAACTGGGAGCTATTTCTTTTTGAATATATGTATTATATATTTCTTAAATGAAGCTGCTCTCTGGTGTTTTGTTTCTAAAGTCCCTTTGTGCCCCACTTTGCACAGCTCTGATCCCAAGGCAGGCCCTGGCATGTGACGTGGGGCCAAGCTGGACATTCCTGAAATGGAGTCTGGCTTTAGTTCAGATTTCAAACTGCATTGGCTTTGGGACCAGCAGAAAGCAAGAACCCAGCCGCCTTGCAGGACTTCGAGGCCTCTGAGCTGTGTTTCTATTCAGGACCCTCTAACTTTGTTCTTGGAGGTAGTTTGGCTTCCTCAAAGCCAGAGGTTATTTGGAGAATTCACTCTTGACTCACAGGCATATCCTCAGTCACTGCCTTCTGGCTGGTTCTCTAAAGTTGCTGCCAGACACCAGGCCTGCTGCTTCCTCCTCCTTCCTTTCTCCTCCTCCTTGGGAGCAGCGGCAGGGGGAGCCTTTGGACTTGGGCAGGGAACCCCATGCCCCCCTGTGTCCCCAGCCGTGAGGCAGCTGGTGTGGACTCCAGTTGGGCTGCAGGCAGCTCTGGGACCACATAGGGCAGGCACTCCTTGACAGGCTGGTGTGAAACACACAGTCCCCTTGGCCACCTGGCTAGCCTCTTGGGAACAGCCCTCTTCCTGTCGAGTGGATGGGGATAGCTGCTGACACAGGACAGAGAGAAGATCCCAGGTGAAGCTTAGGCAATTACCAGAGCCAACTCAAAGCGGAGAATTCACTGGGGAAGTTTTCAGAAAGAAATCATTTTTCTGCCTGTGAGACTGGCCAGGTGTCTTCACTGTGGCCCATCCCACAGGCAACTCAAAGCCAGGAACCATCAGAGGCTACTGGTTCCCTTTCTCAGGCTTTGGGGAAGGGAGTCTCCTCTCTGTTCCCACTAGGCTCCATCTTAAGATTGAGCTCAACTTACAGGCGTTGGGACTTTTCTCCCTTTTCCTTGATGGACCAACAGTGCTTCTTGCAATCTCACCTTGTAACTTTTAGGTTGATTTCCTCCCTTGATCAGACATCCATGTGGCCTCTTTAAGAAGGAAAAGAATAGCACCTTCTATGTGCCAGGCACTGTGTTAGGCACTTTTATATATATATACTCTCTTTAGGGTGAGACTAAGTGATGAGGACTTCCCTTATTAAAAGCCCACCACTAATGGATCAACAAAAACACTTGGAGGTGAGAAGGTCTTTCTCCAAAGATCCAAGGCAAGATTGCCTTCAGTCTGAGGTTTGTTCTCAAAGACCCACCCCCTACAATATCCTCCACCTCTAAATGTGTTTCCCCTGTGATGTGCTCCTTTGCACTCTTCAGATGGTTAACCTGAGTCCTTATAGACTTTGTGGACCAATAGGATATGTGGCGTGTGTAACTTTCTTTTAAAAACTTAAGTAAAGTGGTCTTGCTACTTTCTGCTTGTTGAGTCTTCTTGGCATTCAGTCTTAAAAGCCAGCATCTCACTATTTATTGACGGGTCGTGTGTATGTGTGCGTGCGTGCGTGCGTGCGTGTGTACATTTCTAGGTGTGCCCATGTCCTCCTGCACCTTTTAAAAAGGAAACCCAGTCACCCCACTACCTATGTGACATCTTCTCATGCTTCTAGTATATTGGTCATATATCAACAAAGGGTTTTAATTTTCTAAGGCTGACATGTTCAGGAGGAGCTGGGTCAAATTTTGAGCAGGGCATGGGAAGGGAAGGGGGAGAAGTAATTGACATTTATTTTATTATTTATTTTAAATGTTTACATCTTTGTGTTGTACCAAGCCTGAATAGAAACAGATAGCATTAAAATGCTCAGTTCCTCTCTCCCTCTCTTTCTTCTTTATAATTTTTTTTTTTTTAATTTAGGCTAATGATGCTTTGTTTCTAAAATGATTTGTGACTTGTGCTGTATAAACTGTATAAAAAAAGGTTCTGTTTTTAAAGATGGTGTGTCATTCCCCTGGGGACAGTGGTCACCAAGAACTCTACGTTAGAACACAAGGAAAGATCCTGCTCTGTTCATCAAAAATTATTTTCTGTGTATGATTAAAAGTTTATTCCATTTATTTTAGTTTGTGGTTACTTGATGTCGAGGAAGAAAAATGTTCACGTTTGTATAAAGAATAGGTATCAGGGTGTCTTTTCTGAAGTGACAGATGTATATATAGTATTTTGGTATATCGTGGCAAATCAAAAGCTTCGTGCATCTGTATTTGAGGTATGTTGATGATGTGGAATAAAGACTGCTCTAAGATCCTGGAGGTAAAAAAAAAAAAAAAACATTGTACAAGATTCCTACAGCTTGATGGGGGAATTTAATTATCTTTCTGAGCACCTTGTCTTTTTTTTTTTTTTTTTAAAAATATTGGTGAAATGGTCCCATTGGGAAGGCTTCTAAATAGGCCTCTCCAGGCAGGACTATGAGCTCAAAAATCTTTGTATAGTTTTGAAATTTGAGGAGTAGCTCAGCTCTGAAGCATCTCTGGTGGTGTTTTGTTGTTGTTTTGTTATTTTACTGTAATACAAGCCTACAGTATTTGCACTAAAGAAAGCTTGTTAGAAAAAGCTTGCTGCTATGGAAGAAAGAACATATTACAACTTTTTTTCCTTTTTTTTTTTTTTTGTTAGCTTTTTCACTTTCAATTGAGTAGCTTTTTGTAGAATAAAATGAATTAAGATTGAAGAGCCTCTGATGGTTGGTTTATTCTGTCTTTTCTTCCTATCTTTTCTGTCGCTTCTCTTTTTTTCCTTCTAGGCTTTTCTACCTTTGGCTCCGTGAGCAGAGTTGGTCTTTCTGTTGGGAATGGGGAAGCAGGGAACAGCTCCCTGGGAATCTCTTACAGCAAAATTAGAAGGGGAGATGACCCTAAAACCTCATGCAAATCAAGGATCATCAGGCTATGTGCAACACTCTTCATGGGCTCCACATGGTCTGAGCACATAGACATGAAAACCCTCCACCCTATGCTGACTATGGCAGGTGGAATAGGAGCAGGATAACTGCAATGAGGACTCCCATTCAGAGAAAAGAAGCATGGGAACACATCCGGCACTGGTTCATGACAACGATCAGATGCTGATGGGCTGGAGGAAGGAGCCCCCCTACCCCGGCAGTGGAGCTTTGTCCATCGTCCATGTCTCTGGGCTTTTCCTTCTGGGAGGCTCTTATCCCCCATGGCTACCCCTGAAACAGGCATTGGTGAGAGGGGCCCCTGGGAGCTTCAGAGTGTTCACCTCTACTTCCTGCTGCTGCAGATTGTGGATCCCAGCGATTGTATTAGGAAGTAACGGTCATAGTCAATACTTTTTATTGTTTGTTCAGTGCTTTCAAAAAAAAAAAAAACTTAGCAGGCTTTCAATCTATCTGCTTCTGATCAGTTTCTTATATAAAATCCACAACTACAGACCTGCAGCCATCATTCTAACACTGCAGGGGAACCAGGAGGGACTTGAGAAAGTTAAATTCAAACTTGCCCTGTGCCTAACCACACTGCAGTTTACTTTGATGTGAAGACCTTTAGAGTGATATGTAAGGGCATCTCCTCCCAGAGCGCCCCTCTCCCTTTGCAGTCTGGGACTTCAACTGGAAGATAGACAATGAAGATACACACCTGACTTGCTCCCACACTTGCGTCCTTTCTCACCTCCTCCCCGCCATCCTCCAGACCTGAGATCAGGGCTCTCCTGTCTGTTCTCCTCTTTAGATAAAGCTCTAAGGTCAGTTCTGTCAGGCTGGCTTCTTGATAT EMBV3_02062 TAAATGTCTGCCCCAGATGCAAACTGTTTAATCAGCTGAGCGGAGCCTGTAGACCCCACA Gene BVV0102_363938 + 0 NULL GK000020.2:22435964-22933875 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24392 GCTGCATACATCAAAAGGCAATACAAGGTGAGAGTCAGTTGAGAGCCTTAGGGACTTATG Gene GeneID:534471|INTS2:XM_002695604:177_cdna UTR3_Alt 2 NULL GeneID:534471 19 GENE INTS2 NULL integrator complex subunit 2 EMBV3_08747 GACATCATCAATTCCATCTTCTTTCCACAGCCTTAACCAGGATGCTCTGGCACCTCCCAC Gene BVV0102_230998 + 0 NULL GK000026.2:17148148-17160940 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13408 AGACGCTGGGCTGCCCATGGGCCTGTTTCTCAGGGGAACTGTCTACAGGTCAGCAAAGAT Gene BVT0102_192340 + 0 NULL GK000014.2:64308335-64315311 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053687 TCONS_00053688 TCONS_00053686 TCONS_00053689 1 XLOC_031801 NonCoding TCONS_00053688 XLOC_031801 NonCoding NonCoding - 14:64312048-64314146 - TSS39554 602 2 TCONS_00053688_1 48 0.970099667774086 3 0.714353838817358 0.000478403447872118 0.000138055252290356 0.00166293506775497 0.000503649372180763 0.000164596890344524 2.81785618965827e-08 0.000414827718948164 0.000461780513391449 5.14593739694429e-25 0 0 2.29806773016951e-89 0.000153976033168938 6.00432154111545e-08 2.24581055187224e-05 0 0 0 0.00150525581186743 0.002742123125315 0.000104529016043247 0 0.000213349916965148 0 0.00117886899316874 0.000666100320407179 0.000378528054239019 6.73889442243519e-06 2.25570552001702e-05 0 NM_001102073.1 ILDR2 Bos taurus immunoglobulin-like domain containing receptor 2 (ILDR2), mRNA. 2e-31 140 83.21 0.20265780730897 NM_152355.2 ZNF441 Homo sapiens zinc finger protein 441 (ZNF441), mRNA. 2e-19 100 83.16 0.156146179401993 0 noncoding 1 0 1 1 -0.436516710342645 0.0281475448149131 0.0477963405808838 0.369652488214027 GAGAAGGCTGCCCAGCTTTTCTCCGAAGCTCCCGAGAAGCAGAGGCCCAGAGTCGAGGAGCGGACAGAGAGACAGACGCTGGGCTGCCCATGGGCCTGTTTCTCAGGGGAACTGTCTACAGGTCAGCAAAGATCCCCTGGAGCAGGGCATGGCAACCCACTCTTACCTGGAGAATCTCATGGACAAAGCAGCCTGGCGGGTTACAGTCCATGGGGTCACGAAGAGTCAGACACTAATGAAGCGACTTAACACATGGCTCAGGATATTAACTACAGCCCTTGAGAACAATTAAAGGTCCTCAACTTTGTTTTATAGCCAAATTGTTATTATTTTGTCTTGTTTGCCTGCTTTCCTTTGTTTCTGCATTTTCTTACTTCTCTTATTAAATCTGCTCTTTGAAACGCAGGGAAGGCCTAGGAGGCTAAAGTTTTTCTACCAACAAGAGTCAAGGGTCACAGGAGTTCTGTCCTTTAGAAGGCCCTGCAGGGTCCTGCTTGGTTTCAGAATTGCTGGATCATATAGTAGATCTATTTTTAAGTTTTTGAGGAATCTCCATACTGGTTTCCATAGTAGTTGTATCAATTTACAATCTCACCAATAGC TCONS_00052088 r 5' 2597 TCONS_00052088 r 5' 980 EMBV3_13583 TCGTAGTGAACAACCAAATGCTGCAATGATTCCCGAACTAAAACGTCATGAAATCGGAAC Gene GeneID:100337025|LOC100337025:XM_002683919:2_cdna Constitutive 0 NULL GeneID:100337025 Un GENE LOC100337025 NULL LKHP9428-like EMBV3_31901 CTACCGCTTCTATCTGTCCTTCGAGAACTCCGAGCACCGGGACTACATCACCGAGAAGTT Gene GeneID:100036592|FUT7:NM_001098164:2_cdna Constitutive 0 NULL GeneID:100036592 11 GENE FUT7 NULL fucosyltransferase 7 (alpha (1,3) fucosyltransferase) EMBV3_38944 AATGTGCTGAAAAGTCTATATTATTCACTTCATCTTTGTCATGTCTGTCTACCATTAACC Gene BVT0102_154105 + 0 NULL GK000008.2:34064312-34882596 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224913 TCONS_00224920 1 XLOC_137658 NonCoding TCONS_00224920 XLOC_137658 NonCoding NonCoding - 8:34163915-34388272 - TSS168553 831 1 TCONS_00224920_1 39 0.380264741275572 3 0.996309436787962 5.19911275339296e-05 7.85413357339725e-120 3.29903902325885e-05 1.18189654342277e-16 5.85505400052955e-05 3.51153439137551e-05 6.6083281167739e-05 8.51804311327672e-94 0.000165670393804589 4.20684870715311e-18 0 4.32924283031919e-39 3.52183164243612e-48 3.78938480068545e-63 0 0 0 0 0.000131181127226172 0.000503992105491623 0.000262536634332142 0 0 0 0.000108430755371942 0.00038467814659344 9.29150733504133e-05 0 0 0 XM_005199139.1 LOC101904752 PREDICTED: Bos taurus uncharacterized LOC101904752 (LOC101904752), 2e-136 489 100.00 0.324909747292419 NM_002839.3 PTPRD Homo sapiens protein tyrosine phosphatase, receptor type, D (PTPRD), transcript variant 1, mRNA. 3e-57 226 94.48 0.173285198555957 0 noncoding 0 0 0 0 -1.22189564873078 0.0130658136416944 NA NA GAGGGAGCGCGAGCGAGCGGGCCAGCGCGGGAGCGACCGGGAGAGGCTCACCGCCCCGGCTCCCCGCCCCGCCGCGCCCGCAGCCGGCAGCCCGAGCGCGTGGGGCAGCGCCTCGCCCTGACGGAGGACGGTCCCTCAGCTTCTCCGCCAGCCGCTCGTCGGCCTCCCCCGCCCCGCGCTCCCTCCCAGCCCGAGCCCTCCCGCTGCTCCTCCTCCTCAGCCTCCTCCCTCCTCGCGCCGCTGACAGGCAGCCTCCGCGGGGAGAGTGCAGTTTATTCTGGGCCTGTGTGGAATAGAAAGACAATTCTTTATTTGACTGGAAGGAGAGAAAAGAGAAGACTCCTCAGGGTTTCCAAGGAAGACTGGAGCGGCTGCTTTAGATGCTGGTGGGATCTCAGTTCTCAGACCAGGGATCAAACGCAGGCCCTTGTCAGCAAAAGCTTGAAGTCCTAACAACTGGATTGCTGGGAAATTCCTCGGATCACTTCCATTTTTATTGAGATATAACTGATATACAGCACTTTATAAGTTTAAAGTGTAAAGCATTGTGATTTGACTTTCATGCATTATGAAATAATTACCACAATAAATTTAGTGAACATCCATCATCTCTTATAATGTCATAGATACAAAACAAAACAATACAAAAAATAAGATTGTTTTTTCTTGTGATGAAAACTCTTAGGATTTACTTTCTTAGCAACTTTCATATGTTAGATAATTTAAATTCCTATTAAGAATACAAATAGAATCCAATTCAGAATGAGTAAAAATGTGCTGAAAAGTCTATATTATTCACTTCATCTTTGTCATGTCTGTCTACCATTAACC TCONS_00224944 s 5' 1834959 TCONS_00224944 s 5' 2059315 EMBV3_31104 CTTGGTTCTTGTTACACACAAAATGAAGTAGCTTCCTGTGGAGCCTTCACGTGTTAAGTG Gene BVT0102_174892 + 0 NULL GK000004.2:20297970-20621605 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180991 TCONS_00180992 TCONS_00180996 TCONS_00180994 TCONS_00180993 1 XLOC_110517 Coding TCONS_00180994 XLOC_110517 Coding Coding ARL4A 4:20296367-20299634 j TSS135598 2837 1 TCONS_00180994_2 200 2 0.131965707287201 0.000575725724074041 0.00080062585169604 0.000611652576955343 0.000189270678198628 0.000729743345889455 1.81531975227163e-05 0.000469660916424034 0.00101658712807847 0.00164519264286224 6.78975162051172e-05 1.85680803852486e-07 2.03484663503097e-06 2.95180662940745e-05 0.000110382832147093 0.0002748240433655 4.96040802293955e-05 7.63096289135843e-05 0.000163017691241017 0.000754964112834277 0.000564072871684779 4.76229808367245e-09 2.33628183626284e-16 1.86645717200089e-05 3.27840656273928e-10 0.00064616564519054 0.000452564615601224 0.00101677905605944 5.85336240266817e-11 2.45789321244925e-10 1.49037860595238e-07 XM_005205215.1 ARL4A PREDICTED: Bos taurus ADP-ribosylation factor-like 4A (ARL4A), 0.0 2672 100.00 0.521677828692281 NM_005738.4 ARL4A Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript 0.0 2645 83.30 0.894254494183997 TCONS_00180994_2 sp|Q3T0M9|ARL4A_BOVIN ARL4A_BOVIN ADP-ribosylation factor-like protein 4A; 3e-147 412 100.00 0.995 7 coding 1 1 1 1 -0.110137779978563 0.354942618346606 -0.0459243484903313 0.36648387951904 GGGTGGGCGTGGTCCGAGTCTGGAACCAAGGTTTCTAGTGCTGCAACCGCCAGAGCTTCCTTCAGAGCTAAGCTGAACGGACGTGGGGTGCTTGTCCGCCCCAGTGTCGAGAAGCCTACCAATGCTTTCTCATTTGGACCCACGCTCCAATTCAGGAGCAGTCTGGTAACTGGATCTCCTGGGAAGAGAAGTCCTTAAAGAGTAAGAAGGAAGCATTTTTCAATTTGGAACACTTCTCTGCAACTGGAAATGGGGAATGGACTGTCAGACCAGACTTCTATCCTGTCCAGCCTGCCTTCATTTCAGTCCTTCCACATTGTTATCCTGGGTTTGGACTGTGCAGGAAAGACAACAGTGTTATACAGGCTGCAGTTCAATGAATTTGTAAATACCGTGCCTACCAAAGGATTTAACACGGAAAAAATTAAGGTAACCTTGGGAAATTCTAAAACAGTCACTTTCCACTTCTGGGATGTAGGTGGTCAGGAGAAGTTAAGGCCACTGTGGAAGTCATACACCAGATGCACAGATGGCATTGTGTTTGTCGTGGACTCTGTTGATGTTGAAAGGATGGAAGAAGCTAAAACTGAACTTCATAAAATAACAAGGATATCAGAAAATCAAGGGGTCCCTGTGCTTATAGTTGCTAACAAACAAGACCTGAGGAACTCATTGTCTCTCTCAGAAATTGAGAAATTGTTAGCAATGGGTGAACTGAGCTCGTCAACTCCCTGGCATTTGCAGCCCACCTGTGCAATCATAGGCGATGGACTGAAGGAAGGACTTGAGAAACTACATGATATGATAATTAAAAGAAGAAAAATGTTGCGGCAACAGAAAAAGAAAAGATGAATGGTGATAGCTTTTATATCTGTGTGGAGTAGGTTTTCTCTGGTCTGATTTTGACAAATGGAAGAGTGTCTTCAGCCTGGTCTGCCTGCCTGCCTTCCTGGATGCTGTTAAAGCTTTGTTTTGTTGAACAATCGGATATCCAACTCTGTTGCCTTTTGGAAGATGAGTAAATGCAGTGCTTCTTAAAATGGTCTCTTCTCCCTACCCCACAAATCTTCTGGTACTGCCATTTTGGGAAGCGAAGCAAGGATAGAAAATTGACCAGAAAACAGTTGGGGAAATTTGACCTGAAGTTAGTGAAATAAAACTTTGAAGATTGTCTGCCTAGTGTTTTGTGCTTACATCTTTGGGGGGCGGGGGAAGCCTTTGCAAAGAAATTGTATGCAAGGCTTTGTATGTTAAGATAAAGTGCTAATGAAGGGAAATGTTAAAGTAGATTATTATATATACAGTTATATTGATCACATTGGTCCAACCAGTCAGGGACAAGGAGGAAGTGTTGGTTTCTTAAGATTTGGCCAAATGAATCTTGACATTTTCTGGAATTAAATACTGTAATGCTATATGTTAATTCTAGACGATGTTTAAGTTGGTCTGACTTCAAATAATAAAAAGGTATTTAGGGCATATTCAAGTGCATGGGTTAGTTTTTCTGACAAAGCATGTTTTGGTGTATAGTCTTTTACTTTTTAGAAACAGCTATGCATCTTTTTACATGGTCAGGTTTAAAACACCTTTTGGGGGCTTAGGGCTGTTGAAATATTTTGTTGTCAGAATCACTTTCAGTTGAAGAACCTAAAGTAACTCTTTTATATAGTAGATTTGGGCATGTAGACTAATCTTAAATGCATATGATTTGATAATGTATATGGATTTATGAAGAAAGCAATTGATGAATTCAGTCAAGAGGATGTAATTACAATACCTGGTCTCTAAAGTATTCCAGTTGTAAATTATTTGTTTTATTTGCTGGCTAAACACAGATGTGGTTTTTCATATATTTTTGTAGTGTTTTGAGAAGAGCAGAAGCTTTATAAACACCACCTAATGCACTGTGCAGTGAAAATGTAAGCGATATCCTTATGTGCTCTGAGCTTTAATTTTTTTGTTTACAAACTGAACAGTGTTATGCAGGCAGTCTAGTCCTTATTTAAGGTAGAGAGAAATGATACAGTACTGCAGATAAGAATTAACGATTATAGAAAATGAAGGGGAAAGTAGCAAAGCTGTGTTCTGTGAAAATTCACTAGCACTGTTTATGTTGGACTCCAAAAAAATGTTCTAAATTAAAAGGAGGGCAAACCTTTACCTAATTCTTATCTGCAGGTGAAGACTTGCTTCCCGTGATGACATGTTAGCAAATCAGCATGATTTCTGTGTGTTAACGCCAACACCTGTTTGTTTTGAAGATAACCAAAAGAAATGCACTTTGCTAGCAGGGTTTGGGGTTTTTTGTTGTTGTTGTTGTTACTTTTGCTTTTTTTAAAAAAATGGAGTTTTTGGAAACTTGGTTCTTGTTACACACAAAATGAAGTAGCTTCCTGTGGAGCCTTCACGTGTTAAGTGTATTAATACCTGCACTAGTGACAGTCACTTAGAATGTTTATATTTATAGAAATGTGGATAATAACTACCAATAAACTACTTGAGGCAATAGGAGAAGTGTTTGGCTTTGAGTTTTAATGTATGTATTTACACTCAGTAGTAGTTGAAAACAACTTTGAAAACTGGGTCACATGGTCCTAAGTCATGTGACACAGGCACTAAGAAGTGGTTTTCCGGGAGAACCTTTTTTATTACCCTCACTCTGTGATATCATGATGTATGCTCTATACATCACTCGATCCAGGATGGATTAGTAAAACTTGCTGAGAGAAAAATCTGAATTAGTTTAGATCCAGGATGGATTAATAAAGCTTGCTGAGAAAAAATCTTTAGGTTTTCAGCCTTCCTGTACGTAGTTCTGTGTAAAATAGTAAAGTTAT EMBV3_03354 AGGGTTCTGATCTCAGCCCCAGCCTGGACAAGGCAGCAAAACATTATTCAGACAACAGCA Gene BVV0102_008663 + 0 NULL GK000013.2:42894172-42950999 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03034 AGCATCACTGTGCAGACTATGATTGATGTCCTACGGGACAAAGCCAGTGGAGTCTGCGTA Gene GeneID:534933|SCRN1:NM_001110803:22_cdna UTR3_Alt 2 NULL GeneID:534933 4 GENE SCRN1 NULL secernin 1 EMBV3_42699 TAGTCTATTCACACAATGAAGCCCCACACAGCAAGGAGAAGCGACACTCGTGCAGACACG Gene GeneID:100125276|GNG4:NM_001103324:55_cdna UTR3_Alt 1 NULL GeneID:100125276 28 GENE GNG4 MGC151805 guanine nucleotide binding protein (G protein), gamma 4 EMBV3_41278 TTACTCTTCTGGTCATGTATTTAGAACTTAGATCCCAGAATGGTAGGGCAGGCTGACCCT Gene GeneID:539286|LARP4:NM_001101189:98_cdna Constitutive 0 NULL GeneID:539286 5 GENE LARP4 NULL La ribonucleoprotein domain family, member 4 EMBV3_41529 TTCAAGGCCCAGAAAGGCCCCACCAATTTCCAGGTGTCAGGAGGACTCAGAGAAGCAGCA Gene GeneID:509295|RIN1:XM_002699354:246_cdna Constitutive 0 NULL GeneID:509295 29 GENE RIN1 NULL Ras and Rab interactor 1 EMBV3_09611 GACAGAGCAAAGTGCTTTGAAAAGAATGAGGTAGATGACAAAGTGAACTTCCATTTTATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36953 AGGTACCAGGGGTCAGAGTGCGGAGAGCTCAGGACAGATGTAGCTTGTGGAACAGATTTT Gene BVT0102_023180 + 0 NULL GK000001.2:118417711-118445766 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004995 TCONS_00004998 TCONS_00004999 TCONS_00004996 TCONS_00004997 1 XLOC_001157 Coding TCONS_00004998 XLOC_001157 Coding Coding SELT 1:118443937-118476253 = TSS2479 5263 1 TCONS_00004998_3 137 0.074292228766863 6 0.837320129970602 0.000322888159054759 0.0001889732320079 0.000169462529483466 0.000315813866154943 2.68311241565918e-05 5.28084509557907e-05 6.46933623630792e-05 7.56976991753452e-05 0.000437942525712426 4.40805616576976e-06 1.12298256906056e-17 1.49185085449221e-11 2.36373294744733e-11 3.34343650338852e-11 2.0786979103559e-07 0.00137979118097515 2.03003288139216e-06 0.000770410848013476 0.000239173554544501 5.73287328844909e-10 8.00156442640402e-05 1.27156575894485e-07 2.07765215321734e-07 0.000287862281180987 0.000249117328721158 0.000375867849371022 0.000182334493742775 0.00014723212910851 1.32793573603747e-09 4.61204907685915e-09 XR_228874.1 LOC101909770 PREDICTED: Bos taurus selenoprotein T-like (LOC101909770), 0.0 8606 100.00 0.906517195515866 NM_016275.3 SELT Homo sapiens selenoprotein T (SELT), mRNA. 0.0 2170 85.27 0.363100893026791 TCONS_00004998_3 sp|P62341|SELT_HUMAN SELT_HUMAN Selenoprotein T; 4e-100 290 100.00 0.992700729927007 1 coding 0 0 0 0 0.559266404486453 0.144864530790867 -0.239973760744648 0.0482072280432291 CGTCCCACCGGCAGTAGGTCTCTCCCTACTCCTCTCATTCCATCCCAGAGTCTCCCGCGCACCCAACATGGTGGGTCAGGACAGTAAAATGGGTCAGCTCTCCCTCTCACAGCCTGCGCGGGCGCCGGGATGCGCATGCGCATTGCTGCTTCCCTCGTCGACCTTGGCGGATCGCGTTTGCGCGGTGGGGATCAGTTCCCAGCACCGGCTCCGTTTCGGGCTGCCTGCGGTCTCAGTGTGAGGGCGGTCGAAGGGGCTGGCTCGTTTAAGATGAGGCTTCTGCTACTTCTGCTGGTGGCGGCGTCGGCCGTGGTCCGGAGCGATGCCTCGGCCAACTTGGGCGGCGTGCCTGGCAAGAGATTAAAGATGCAGTACGCCACGGGGCCTCTGCTCAAGTTCCAGATTTGTGTTTCCTGAGGTTACAGGCGGGTGTTTGAGGAGTACATGCGGGTTATTAGCCAGCGGTACCCTGACATCCGCATAGAAGGAGAGAATTACCTCCCTCAACCAATATATAGACACATAGCATCTTTCCTGTCAGTCTTCAAGCTAGTATTAATAGGCTTAATAATTGTTGGCAAGGATCCTTTTGCTTTCTTTGGCATGCAAGCTCCTAGCATCTGGCAGTGGGGCCAAGAAAATAAGGTCTATGCATGTATGATGGTATTCTTCTTGAGCAACATGATTGAAAACCAGTGTATGTCAACAGGTGCATTTGAGATAACTTTGAATGATGTACCTGTGTGGTCTAAGTTGGAATCTGGTCACCTTCCATCCATGCAACAGCTGGTTCAAATTCTTGACAATGAAATGAAGCTCAACGTGCATATGGATTCAATCCCACACCATCGATCATAGCCCCAACTATCAGCACTGAAAACTCTTTTACATTAAGGGATTTTTGCAAGAGCAGCGTGACTGACATTATGAAGGCCTGTACTGAAGACAGCAAGCTGTTAGTACAGACCAGATGCTTTCTTGGCAGGCTCGTTGTACCTCTTGGAAAACCTCAATGCAAGGCAGTTTTTCAGTGCTGGCACATTTTGGAATTCTGCACATTCGTGGAGTGCAATAATACTGTATAGCTTTTTTTGTTCCCCAGATCCACTCAGTTAATAGTTTTAAAAAATGCAGACATACTCCTTGTACTTTTTTTTTCTTGGTCATATTTTCAAAAGTAGAAAATTGCGTTACAATTTTTTTTTTTTTTTCAAAGATTTCTGTTAAATCTGTTGTGATTTTATATAAATTTTCCTTTTTTATAGTTTAAAATTGATCTTTTGGGGACTAGAGCTGAAGTTCCCAAATACTTTATAAGAGTTTATCAGACATCTCTAATTTGGTCGTGTCCAATTTATATAGTTTTCAAAATACTGCAGATTGTGAACAGCATATTATATAAGATTATGGGGGGGAAATCCTATATCCAGAGTACTCTACCAATTGTGTATGTGTGTGTGTGTGCGTGTGTGATTACCAGAGAACTACTAAAAGACCAACTGCTTTTTAAATCCTGTTATGTAGTTCAAGTGTTCTGCCTTGACCAATTGAATGAGTTGATTAACTGGGCCTTTATACTTAACTCAATAAAAAACTAAACAGATATAAAGTTAAATAAAAAGTTCAAGTTCATTGCCCAGCGTACCTATTAACATTATATTTAACAATTGTCTACCTAAATTTTTGTCCTTTGACTCACTGATAATTTCCTAGGCGACACACTTTAGATTCACACATTAGTAATAGGTCACTCACCATTGTTAGGATAATTGAAACTTGCTTCACTAAAGAAAGTTTAGTTAAACCTCTTTACAACATTAATGTTAGGTACATGGAGATCACTTGTCTAATAATTTAACTTGACATCATATATCAGAATTGTATTATATTTGAAGAACAAAATTGAAGTTTTTTTATTTGGTGAATTTAATGTCTTTCCAGAGTTCTAAAAAGATAGGTTTTTTGTTTTTTTTTTAATTTAAATTGATAAAGACTATAATTTAGCAGAAATAGGGCCATAAAGTAGAAAAATAGTCATATAGCTACAGTCATACCATACTTCAGCTTCCATGTAGGAATAGAAGTGGTAGGTCCAGTTTTGTTAGTGGAAGAAAAGGGATTTATGGAAAAGTTATGAGATGTTTCAATATTGAGTCCACCAAACACTTTGCACAATGTTATACTTCATTTGTCAGTGAATATTTGTTAAAATGTATGTCTGGTTATCATGATTGCGACAGCCTCAAGGTAGAACACACTGCAGTCCCTAGCTGAACAGAAGTTAGCCTAATAATTCATGACAGAAAATTGATTAAATGCCTTATCCTTTTAATTAAGGCTGCAGAACTGTTAACCTAAGATCACACTGTGGCAAGAGTCAATATAATTTAAGCTAGAGGTTACTTGGAGGTTATTACTCAGGTGTAATAACATTTCGCTGTCTTTGACTAGGGTTTAAAGCCCTGTTAACTTGGTTTGTACTAGCCCAGACTTTTTCCCTCTTACAAGTTGAACACACTGTTGAGTTTGTGCAGGGTCTTTCTTCAGCACCAGACATTCCACTAGTGATGGTTAGCCTTTTGACATTTAGAACTTCCAAACTTGAATCTTAGATAGTCCCATGTGTCTGACAGGCCAGCCATGAAGAATTTAAGATTTAATTCTAACTTTTTCCATGTTGGCCTTGGGTGAATGACTCGTCTTTTGAAGAATAGCTTTAAGTGACTTGGTCACTGATAAAACTCAACTATTTTGTTGACACCCTTCAATATTATTTTATGTTTAGCCATATTTAAATTTAAGATTTAATAGAGTCTAGTGAAGAAATTAGTGGAATGTGTGAATATAAAAAAATACAAAAAAAGAGAAAGCTATTTAAAATGTGGCTTTATTATATTCCTAACAGTTCAAAATTTATTACATAGTTGCTTATAAATTGCTGTGGCTGTATAGTTTATAAATGTTTATGTACTGTGTTAATTAGGAGACCATAGAACGTGACACCTTGGGGTCTTTACGTAGTTGCTTTGTGGAAGAGATTATATATTAGATTAATAAAGAAAAGTTGGTAAAACCTGGCTTTATACCTCAGCAACAAAATGTACAAAAAACATAGGCTTTCAGGATATATGTGCATTATTAACTCATGGCACTGAGATTAATGATAGCAGTTGATCAAACATGACTATCAAAATATAACAGGATCCTAATCATTCTTATTTTGAATTTTATTAGTTTGGGACTTTGATTGGTTGGCATTTTATCATTGTCACAATTTTAATTAATTTTGATTTTTAAAAATAGCCTACAGAACCTTAAAGCATGATTTGATATTTAATACTAAGACTTAAAATCTTTTTTGAGAGAAACATGAGGAATTGAAGTTCAGGGGCTTACCTCTATAGCATTGTGAAAATAAACTTTTATTAAGCTGATGTGAAAGGAATCCCTCCTTTCTGAAGCTGACTCTGTGGTTAGAACACTTGATAACTGTATTTAGGAAATTTTACGTCGTTGTAAAAGTTGTTATCAAGTGATGCTTTCTAATGGCTTCCTAACCCACCCAGTGCTAACACACCCCCGTTCCCACGCAGCAGCCCCGCCCGCAGTTTGGCACTCTAGTCTTAATACTCTTGGACCTTAAACTGCTTCCTGAACCTGATGGGCCAGTTGTGTGTACTTCAGTGTGTGCTTTTCAGCAGCTCTGTGGTATGTTCTGTGCTGAGGTGGAGCAAAGAGCAGCAGTTGAGATTATTGTCCTTCACCCCTAACTTCCAGAATCCCTGTGAAAGTCATGCTAACATCCCCAAATCTGGAGAGAAATAAAATGAGGGTTTCTGTCTTGACTGATACAGACCGTTTAACAGTCTCAGAAGAGAAAGCAAAGTTGTTTTTCCTTAAATCCAGCTGAGCCTTTTCCTTCAAAGTCCCTGGCTCCTTTCCTCTAGGCTTAAAAACAAATAGAAGCAGATACAGATCTGAACTGAAGAAAAATAGAAGTTGGTCTCAGGAACAGTGGGAAGAGTGTTAAATCACCCATTCTCTGTCGAGGCTTGTGGAATGTCTTTTGTTGCCTTTGTTAAGCATGAGCAAAATAAAAGGAAACATGATATCTAGGCAAAGGTGTAGCAGCAGTGGTTTTACAACTTGAGAGAACAATTAAGGCGAATTCCTGGATCCTGTCCCTAGAGATTCTGATTCATTTGGTCTGAGAGAGGTTCCAGTAATTTGTACTTTAGCCCAGCTTCCAGATAATGCTAATGCCCTCAGTTTGAGGTCCACACTGAAGAGCACAGTCGCAGAGGTACCAGAGGTCAGAGTGCGGAGAGCTCAGGACAGATGTAGCTTGTGGAACAGATTTTCCACATTCACTTCACATTTGTAGAATGACTTACTAAGAACAAGACAGTCAGTAAAATGAGAACCTCGAAGAAGAAACGGAACGAGATGAGATTGTTTTAAAGGAAATAAATTGAGGGTTTAATTGTCCCAATTAATCTGTTTTATCAATACAGTATATTTGTTATCCTTGGGGTTAATAAGACTTTTGGGGGTGGGTATTTTAAAATGAAATGTTAAATCTTTGAGTATAAAATAACGCATTTGAATTGTCAGATTTTCTCAAGGCAGAGTATTTAAATTTTTACCATTCTGAGTAGGCAAAATGTATACTTTTAGTTTTATTGTAGTAACCACAGTAGAGTTCTTAAATCACTAGGGAAACCCACTCTAAACTTAAGCCTCCCAAAAGGAAAAGATTAATTTTCATGTAATAGAAAAATCCAATGTAAAGTTAGTCTCATTTTCTATGCGCCTCCACCGTAATTTGGGAGATTTTGTGGGGGCCTGGGGAGAATGGGAAAGGAATATGAAATGTTGATAAAGTCTCAAATCACTTCGTTGAAACTTGAGTTACATTCTTTGGATTCTTTTTCTCAAATAATATCCACTCTAATAATTCTGACATGTTAAGTCTACTTTTCTCTAATTATTGACTTTATTCCCTGCACACAACCTTCTTCCTATTCAGGATCATAACTGTGTAAGACAGGTTTATGGCTTTGTGGTTATAAGCTGCTGAGATCAAGTGCTTAGGTACCTGGGAATTATCTGGAATATATGGAACCAGTGTTGGATCGCTTGGCTTGGCTAGTAAAGTGTTAGAACCTGGCTGGCAGGTTGCTGCCAGTATTCCCTGGGGCCACTGGCTATACTCATTTACTTTGTGTACTAGCAACTCTTACTAGAGAAAAAAACAATTACC EMBV3_20464 CAGTAACATTATATCCATGATTGCTGTATTAGCATACTCACTGTGAGCCCAGCATATTGC Gene GeneID:513043|NXT2:NM_001100353:25_cdna Constitutive 1 NULL GeneID:513043 X GENE NXT2 NULL nuclear transport factor 2-like export factor 2 EMBV3_13828 CCCAGATTTCAGCTTCACAGTTTGGGAGGATACAAGGCAATCTACTCAGACCAGTAAAGC Gene GeneID:281183|GART:NM_001040473:4_cdna Constitutive 0 NULL GeneID:281183 1 GENE GART MGC137968 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase EMBV3_39878 GCTCTTCTACTCTGCTGAGATCGAGATGCTGTGCGACCAGGCATGGGGCAGCATGCTCGA Gene GeneID:504927|LOC504927:XM_002707805:2_cdna Constitutive 0 NULL GeneID:504927 3 GENE LOC504927 NULL similar to Coiled-coil domain-containing protein 3 EMBV3_01074 GTCCATATTGTGAGAGGAGACTTCGATGAGGACATACACATAAATTTGAAGCATTTGAGC Variant GeneID:513840|VPS29:NM_001034455:150_cdna 252^396 1 EMBV3_32058 GeneID:513840 17 GENE VPS29 MGC127483 vacuolar protein sorting 29 homolog (S. cerevisiae) EMBV3_12467 CGCACATCCACGTGGACGGCGCCCCGGGAGGCACTGCTGACTTCGGAGGACGCAGTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16015 CCCCCACACCCCCTCACACACATATAAGCAAGTGGCCATGCTGCTCTTTTAGAGAATAAA Gene GeneID:618648|ARPP21:NM_001076950:232_cdna UTR3_Alt 2 NULL GeneID:618648 22 GENE ARPP21 ARPP-21 cyclic AMP-regulated phosphoprotein, 21 kDa EMBV3_02008 ACATCCTTGAAGAGGCTGATTTACGCCAGTCAGGCGCGCTCCCACCATGCCTGGGCTGGT Gene GeneID:513071|GNB1L:XM_002694656:181_cdna Constitutive 0 NULL GeneID:513071 17 GENE GNB1L NULL guanine nucleotide binding protein (G protein), beta polypeptide 1-like EMBV3_42254 CTGGAATGATCAGATTTGGCCTGGGACCAATGTTGAAGTTGGTTTGGTCTTTATTAAAAC Gene GeneID:533350|OSBPL8:XM_002687171:114_cdna Constitutive 2 NULL GeneID:533350 5 GENE OSBPL8 NULL oxysterol binding protein-like 8 EMBV3_16498 ACTACCTTCTTATACCCATCCTGGTTCATGGAGGTGTGTGAACATCGGGACCGAGGCCAT Gene BVT0102_160269 + 0 NULL GK000010.2:59328690-59441301 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017429 TCONS_00017422 TCONS_00017426 TCONS_00017427 TCONS_00017421 TCONS_00017423 TCONS_00017419 TCONS_00017425 TCONS_00017424 TCONS_00017420 TCONS_00017428 1 XLOC_009030 Coding TCONS_00017422 XLOC_009030 NonCoding Coding CYP19A1 10:59279599-59418664 x TSS11907 440 1 TCONS_00017422_1 67 0.434090909090909 3 0.996857561985848 0.00165496699320291 0.000793692375618244 0.00116378799598541 0.000336138542200634 0.000249315466574885 7.58213271800809e-05 0.000189712758061734 0.000212138482767574 0.000615216124710418 3.72999098322691e-63 3.42182268652065e-12 8.49183152404743e-99 2.60378253953058e-05 5.92110833378005e-06 6.04171917420655e-05 0.000120052222965452 0.000750474384837996 0 0.000352403788831486 0.000927537235033881 0.000661745204456319 0.000129072105009391 0 0.000163969939917037 0.00123069090229183 0.00041991538733289 0.00084174564834357 1.20993699577806e-05 0.000200113737268696 0 NM_174305.1 CYP19A1 Bos taurus cytochrome P450, family 19, subfamily A, polypeptide 1 (CYP19A1), mRNA. 3e-15 86.0 100.00 0.104545454545455 0 noncoding CGGCACACCACTGCCGCCATCTTGAACTGCAGAGTTTTCCGTAGTGTCCCTGAACAGGCTGCAAAGCTGAGGTGTCGGCATAGCTATGCCGCGCTAGGAACTCTTGTCTGGAGTTCCCGGTGGTGTACCTCCATCCTCGGTACCCTAGGAGCAAGACAAACCAGACTAAACACAAAGGACCAAAAAAGGTCAAGTGTGCTGGCCCATCTGCAGCTCCCTTGATGTGTGCTGAGCACTGCAGTGTTCTAACACACCTGTTCACTACCTCCTTATACCCATCCTGGTTCATGGAGGTGTGTGAACATCGGGACCGAGGCCATCTGACAATCACAGGGGGACCTGAGATCAGCTCAGCAACCAGTGACCCCAGGAACTTCTCCCTTCAGGTAACTGGTCTGGTGTCTGGTTTGGATCTGGTCAGATGAACCGTGTCTCCTGCC TCONS_00014232 r 5' 0 TCONS_00014232 r 5' 0 EMBV3_27798 GTGATCCTGGACATAGGAGGGAGGCGGTTGGTTTAATGGTTTAATGTGAGGCCTTTCTGA Gene GeneID:504761|LOC504761:XM_002697785:361_cdna UTR3_Alt 2 NULL GeneID:504761 24 GENE LOC504761 NULL similar to LisH domain and HEAT repeat-containing protein KIAA1468 EMBV3_30495 AGCAGTGGGTGGGGGCCACCTGCCAGCTGGACGTCGACGACTGTCGGGGCCAGTGTCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06648 CTGAACACAGGCTATGGCAGTGAAAGCTAATTCTAACCACTAGGCTACCAGGGAACTCCC Gene BVV0102_160363 + 0 NULL GK000005.2:97524790-97577138 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29687 CATAATTCACTCCATGGTGCAGATCCTTGTCACTGTCCAGTTGCCCTTCTGCGGTCCCAA Gene GeneID:510902|LOC510902:XM_002693722:439_cdna Constitutive 0 NULL GeneID:510902 15 GENE LOC510902 NULL similar to olfactory receptor Olr737 EMBV3_40207 GAGTGTAGATTTTCACACCCAGCAGGGGTCTCACGCGGTGCGTAATTGGTAGATGCATGT Gene GeneID:540039|NPTN:NM_001076199:240_cdna UTR3_Alt 2 NULL GeneID:540039 10 GENE NPTN MGC139829 neuroplastin EMBV3_15670 AGAGAGCCTGGGGGCGCTGGATTTATTGCTTTTAACCGGATTGGCCTCGTCTGTGTTCAT Gene GeneID:510329|ATP2C2:XM_002694745:133_cdna Constitutive 0 NULL GeneID:510329 18 GENE ATP2C2 NULL ATPase, Ca++ transporting, type 2C, member 2 EMBV3_30216 TAGGCCCCACCCCGTGCCTGACTATGAGCTAAGGAGGCCCATGTTGCTGCCCGTGTCTGG Variant GeneID:615639|OCEL1:XM_002688547:167_cdna 381^546 2 EMBV3_19308 GeneID:615639 7 GENE OCEL1 MGC151989 occludin/ELL domain containing 1 EMBV3_25176 GAACAGGGACTTGAAGGAAGACTGAACAAAGCGGCGAGCCCTGCAGAAAGAGATGGAGAA Gene GeneID:100297236|LOC100297236:XM_002691525:550_cdna Constitutive 0 NULL GeneID:100297236 11 GENE LOC100297236 NULL hypothetical protein LOC100297236 EMBV3_27880 CTCCTAGGCAGTAAGCCAGGTGCACGTCTTTTTCCTTTGTATGTCAACCACACTCAACCA Gene BVT0102_283224 + 0 NULL GK000003.2:49797207-49850608 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169791 1 XLOC_103445 NonCoding TCONS_00169791 XLOC_103445 NonCoding NonCoding - 3:49801866-49804201 - TSS127035 2076 1 TCONS_00169791_1 63 0.102601156069364 2 0.111396743787489 0.000163845044697529 8.712516874492e-05 0.000147101202983971 0 1.66474551435201e-05 0 0.000132028125561552 0 4.560765440516e-05 5.94580294497498e-06 0 0 0 2.71906938276783e-05 7.08988707212843e-06 0 0 0 0.000525040149504232 0.000329087436138683 1.46230004986801e-06 0 0 0 0.000196907481092697 9.50256588250282e-05 0.000285054275792432 0 0 0 XM_002689640.3 SMC5 PREDICTED: Bos taurus structural maintenance of chromosomes 5 (SMC5), transcript variant X1, mRNA. 6e-20 104 83.84 0.0472061657032755 0 noncoding 0 0 0 0 -0.409435097245197 0.259161259102373 0.0357544859093075 0.609778927595812 ATGAAGACAAAATCTGCTCACAACATTTAAATGATTGCTTTTTTCATCCTAATAAGCCGTTTCTTTTGGCATGAGAATGGCTGTGTTTTAGAATGGTTAATTTAGGAGGTGATACACAGGCTGAATGGAATGGAGCCCAAGGGTCACAGAAAATTACATCCCATTTGATTTGTGCTTAGTGTTGTCTTATGACTTCATCTCTTCAACAAGCAATGGTTGAGTGTGGTTGACATACAAAGGAAAAAGACGTGCACCTGGCTTACTGCCTAGGAGATATGATGAAAGGTACACAATTGTGATGCAAGATAAAACAGTGTCCGAGTGAGACAGATGCAGTGGTCAGGAGCTTCAAGGGGAGAGACTGATATTACATCCTGAAAGGGCAAAGCAGGGAGGAAGCTGCATTTGGAAAGGGCTACCTAACCTAGGGCCGACTTGCCTGCAGGGAACTCCAGGCAAGGGTTAGCAAACAGACTAGGGAGGAAGGAGGAAGAAGATAGGTCAGGGCTGGGGAAATGGCAGTGGCTGAGCAGTGAACGGGTCCAGCTAACTTGGCTGCAGCAGGTGCTGGTGGAAAAGGTCACCGAGGTTCAAGGCACTGATGACCAAATCAGGTTTGGGCCAGTTCCATGGTTCTGTGCCATCAGCCCATTCACAGGAGGACAAGAATCACAGCTGAGGATAAATGGAACATGACCCAGCCCCCAAAGGGAAGGTTTTGGAAAGAACTGGTTGACAGTCTCGGACCAGTAGGCTGGTGTTCAGAGAAGGAGTCTAGTCACAAAGAGAAACTAAGGCAGAAGCAGATATACCGTGTCTGAGGCAGGCAGCACCAGCGTGTGATTCCAGACCTCGTGGCTGCCAACAAGGCTTCCAAGCCTGGAAGAGCTCAGGAAGAATGTAGGACCTTCCTGTAGGTGGTAGTCACTCCCTGCTGTTGGGATAGCTAGACAAAGGCCAAGCCTGACCTGGGTCTTCAAAGCCGCTCAGGCTTTGAGCTGGCAAAAACCACACTTATTCACTTAAGCACTGAGCACAGCTAAATGCCAGGGCGCTGGTCTCTGGGGACGCTGTGGTGAGGAACACAAGTGCTTTCCTTGCTCCCATGTACTCTGCAATCTTGAGCAAAGTCAGACAGGAGAGCATGGATGGATACCGGAAGTAAGTTTGACTTGTCAGGAGACAAAGATCCTGAAGCCCTTTGAAGGCAAGGCTATAGGGCCTGAAATTGACGAGCCAGGGTTACCTCCTCCACAAACTGTCCCAGACCACCTTCTTCAGACAAGTCTGCTGGTAGGGATGGGCTCCTCTTCTAGGTTGGAGGTGGGAGTCGTATAGTTTTCTATCTTATTTCTATATCCTCTCTGAGACTGTCAGCATCTTGAGGGGAAGGAACCACACTTTCTTGTCGCTAGATCACCCATGTCGCACAGCTTGTGGGATCTTAGTTGCCCGACCAGAGATCAAACCTGGGCCCACAGCAGTGAAAGCTTGAAACCCTAACCAGTGGACCACCACGGAATTCCTTAGCTTGTCTTCTTTTTAAACCAGAAGCTCTAGAAAGTTAAACATCCTTGCTTTCTGATTTAGGCAGTTCTCCCCAAGGCTTGCTTAGCACCGGAAATGTTGCCTGAATGATCTTGGGAGTAGAACTTGATCTTCAGTGTCCTAATTCTGCCTTCAGTCTCACAGTTTGTGGGAGTGGGTGTTGAATCCCATCCCCTTCAGATCCACTTCTCTTTCTTCCAAGTTATTGAACAAAGGCATTTCTCCACTCCTGGCCCACAAAGGATAACCATCTATTAAAACTTAACTAATCTTAAGTCTCTAGCAATTGAGAGTAATCATGAAGTCATAATGCATTGTGCCAGGCACTACACTGAGTTCTCTGTGAATACATGAATGTGCTCCATCCTTTTGACTCAGTCATTGCCCCTATCCCCGGATGAGAAGGGGAGCCACAGAGAGAGCAGCAAGATGGATCAGGCACCTGCCCCCGGCTACCAGTTACCCTGAACTGTAGCTGCTTCTCCCAGGAAAAGGATCAGGAGGGAACCAGCAAACAACTGGAAATGG TCONS_00173269 r 5' 4661 TCONS_00173269 r 5' 4661 EMBV3_38819 ACACAGCCTGAACTGAACCAACTGACACAGGCAACGACCCAAGGTTTCCAGTAACCAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04265 CCTAGGAAGAGGTAGTAGGTTGCATAGTTTTCGGGCAGGGATTTTGCCCACAAGGAGGTA Gene GeneID:791025|MIRLET7D:NR_031369:120_cdna Constitutive 0 NULL GeneID:791025 8 GENE MIRLET7D MIRNLET7D bta-let-7d microRNA let-7d EMBV3_07029 GTGCACAACAGCGGGAAAGGCTTCATTGACGGGCATTACAAGGATTACTTTGTGCCTCAG Gene GeneID:512164|ITIH2:NM_001098016:8_cdna Constitutive 0 NULL GeneID:512164 13 GENE ITIH2 NULL inter-alpha (globulin) inhibitor H2 EMBV3_27713 AACACTGCCCCCTGCAGACCACAGAAACCAAACTGCCAGCAAGCTCGGAAGAAAATCGAT Gene BVV0102_257909 + 0 NULL GK000028.2:1-46312546 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160886 TCONS_00252771 2 XLOC_097782 XLOC_155712 NonCoding TCONS_00252771 XLOC_155712 NonCoding NonCoding - X:95874459-95875130 - TSS189992 671 1 TCONS_00252771_1 68 0.108792846497765 1 0 0 0 6.8956838325014e-06 0 0 0 0 0 2.35175170990596e-05 0 3.41160421123258e-06 0.00012434090850433 0.000111654620623647 0.000171504611872156 0 3.93615563503226e-05 0 0 5.34346105111464e-06 1.36945535235379e-05 0 0 0 0 1.03255879740818e-06 0 6.70490457082662e-06 0 0 0 XM_005200782.1 LOC101909003 PREDICTED: Bos taurus uncharacterized LOC101909003 (LOC101909003), 2e-159 565 91.58 0.597615499254843 0 noncoding ATGACATAACACATTTATAATGCAAAGCACCTGGAAGTAATCAGCTGTTAAGGAGTACAAGTTGCTCAGCTCACTGCGAGGTGAATCAGGAAGGGACTTTAATCCAGAGTCGATAGAGAAGAGGGCAGGGTAGTGACCCAAAATAACCATCTTGTGGGGGCCAGGTTGGACAGGACCCGAACATCACGAATCAGGTCCCGCAGTGGAGAGTTCTAAGCAGTTTCGGGGAGAAATCTCCCAGCATAGGCAGGCTGCGAAACTGGCACTGACCTCAGTGCTCCCCAGGGCAGGCCCAGAACCAGCCCTCAGCAACTCCGGATCTTCCTGGACGTCCTGACTTCTTGCCCGCCTCGCTGTGGTTCTGTGGGTGGGTCGAGCGGAACTCGCGCGGTTCAGGGGTGGTTGGCCCAGGCCCCTTCGAGATGTTCCCTTTCTTTGTCTGGTCCGCAAGGGCATCCCCCATTAAGTCCTCTGCTGGAAACCGAGCAGGAAGGATCGATTTTCTTCCGGGCTTGCTGGCATTTTGGTTTCTGTGGTCTGCAGGGGGCAGTGTTGCTCCGCGGAGCCGCTTGCCCGTTCCTCCTGTACCCGTCCGGGTTGAAAAAATATTTCAAAGCTTTTTGCGGTAATCAGCGACGGATATTTTTCCTGTGCTTGCGCCGGTTGGCTGG TCONS_00245200 TCONS_00245203 TCONS_00245201 TCONS_00245202 . 5' 57642 TCONS_00245200 TCONS_00245203 TCONS_00245201 TCONS_00245202 . 5' 57642 EMBV3_38270 TACCTTGGTCTCTTGCCTTGGATTGGCTCACAGAAAAACCAGACCTGTTCCAACTAGCCC Gene GeneID:788379|LOC788379:XM_002699573:36_cdna Constitutive 0 NULL GeneID:788379 X GENE LOC788379 NULL similar to Uncharacterized protein C14orf135 precursor (Hepatitis C virus F protein-binding protein 2) (HCV F protein-binding protein 2) EMBV3_09550 TCTCCCTAGCTTATATCAACTGCTGCATTAACCCCATCATTTACGTGTTCGCCGCCCAGG Gene GeneID:493645|C5AR1:NM_001007810:103_cdna Constitutive 0 NULL GeneID:493645 18 GENE C5AR1 C5R1 complement component 5a receptor 1 EMBV3_21476 ACACTCTGCATACCTCAGAGACCCTGGAGGTGGAGATCCCAGTGGCCACATGCATCAAGT Gene GeneID:100125917|RFXANK:NM_001105488:2_cdna Constitutive 1 NULL GeneID:100125917 7 GENE RFXANK MGC139634 regulatory factor X-associated ankyrin-containing protein EMBV3_28505 CCTTGCGGCGCACCCAGTGTTACCGTGACGAATCCACCTCACTGCCTGGAGATCACGCCA Variant GeneID:539043|ODF2:NM_001038180:172_cdna 418^543 1 EMBV3_11729 GeneID:539043 11 GENE ODF2 MGC134075 outer dense fiber of sperm tails 2 EMBV3_21885 TCAGGCTCAGCTTGGCACCTTGCTGCTGTTCCTCGTCCTGCATTTACAAAGAGTCTCTAT Gene BVT0102_106811 - 1 EMBV3_19110 GK000012.2:1902768-2067518 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41549 TCTGAACGTGTGCCTAGAACACAGAAACAAACGAGCACAGAGGGAAGTGGAGCTGAAGAC Gene BVT0102_061916 + 0 NULL GK000011.2:87038434-87175585 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33340 CATGATGGCTAAAGCAATACTGCCGCTGCCCCCTACCCCTGCTTCTGCTGCCTGTTTGGT Gene GeneID:618204|SCN1B:NM_001076496:772_cdna Constitutive 0 NULL GeneID:618204 18 GENE SCN1B NULL sodium channel, voltage-gated, type I, beta EMBV3_19091 CTCCCTGCATCTTAGTGTCTTGGTGTAGTGCAGCCATGTGTGGTTGGTGGCAGTTTCTGT Gene GeneID:509011|MKL1:XM_002687940:11_cdna Constitutive 0 NULL GeneID:509011 5 GENE MKL1 NULL megakaryoblastic leukemia (translocation) 1 EMBV3_22091 CCATCAACCTGGCCTTTGGCTTCGCCGTGACCCATTGTCTCTCCGCTCCTGGGTTCCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29242 TCGTGCCGATCATGATTTTGTAGTACAGGAAGACTTCATGAAAGCAGTCAGGAAAGTGGC Gene GeneID:518637|PSMC6:NM_001046240:167_cdna Constitutive 1 NULL GeneID:518637 10 GENE PSMC6 MGC137217 proteasome (prosome, macropain) 26S subunit, ATPase, 6 EMBV3_06421 TCTGTACATACGGACACCGACGCCATTTAACCTAATTTAAGACCGGAGGGGGTACATCCC Gene GeneID:407228|CUL1:XM_002687033:114_cdna Constitutive 0 NULL GeneID:407228 4 GENE CUL1 NULL cullin 1 EMBV3_38023 GGGCCTGCATACATTCTCCCTATGCCTTTTTGTTGGCCAGAAATTGGAATGATTTGGGAG Gene GeneID:100336486|LOC100336486:XM_002700052:23_cdna Constitutive 0 NULL GeneID:100336486 X GENE LOC100336486 NULL envelope glycoprotein-like EMBV3_37065 GCTGTCCCACTAAACAATCTGGAACCCATCACTAATATACAGATCTGGTTAGCCAACGGG Gene GeneID:613578|UBXN2A:XM_002691467:329_cdna UTR3_Alt 2 NULL GeneID:613578 11 GENE UBXN2A UBXD4 UBX domain protein 2A EMBV3_10254 CGATTGTCGTCTCTTTCTTGTTGAAAATGTCTGGCAGGGGCAAAGGAGGGAAAGGGCTAG Gene GeneID:530773|LOC530773:NM_001145871:35_cdna Constitutive 0 NULL GeneID:530773 5 GENE LOC530773 MGC159383 germinal histone H4-like EMBV3_26426 AAGCCAAGGTTTACAGATATGAGAGTGCTATTTGGGGACCTCCGCACTATTCACGCCCTG Gene GeneID:527943|MDH1B:NM_001083452:29_cdna Constitutive 0 NULL GeneID:527943 2 GENE MDH1B MGC155115 malate dehydrogenase 1B, NAD (soluble) EMBV3_09239 GCAGATGAACTCTTCTATGCACGTGGCTGCTCTTCCCTGCTTGAGTCTGATGCTGCTTCT Gene GeneID:526285|IL24:XM_002693896:223_cdna Constitutive 0 NULL GeneID:526285 16 GENE IL24 NULL interleukin 24 EMBV3_19093 ACTTCCCTGGCTGAGAACTTTGCAGACCGTGTCCTTCAAGCTACAACACAGATCAGTCCT Gene GeneID:539713|BCS1L:NM_001015671:113_cdna Constitutive 0 NULL GeneID:539713 2 GENE BCS1L NULL BCS1-like (yeast) EMBV3_42472 CCGCTGCAAAGCTGCCGATGGACCTGTGGATGAGTACATGCTGCCTTTTGAGGAGGAGAT Gene GeneID:282131|ACVR2B:NM_174495:29_cdna Constitutive 0 NULL GeneID:282131 22 GENE ACVR2B ActR-IIB ActRIIB activin A receptor, type IIB EMBV3_29386 TGTCTAGAGCAAGGAGAAGAGCCATGGGTTCAAAGACCCCTGGAGTTCAAGGACAGTTCT Gene GeneID:100126179|ZNF75A:NM_001109965:10_cdna UTR3_Alt 2 NULL GeneID:100126179 25 GENE ZNF75A MGC155127 zinc finger protein 75a EMBV3_42746 ACCGCCGCAGTCCGTGAAGTCTGTGAGGAGAACCAGGAGAGGAAGCATAGAACGTATGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37780 ATGCATGGAACTGAAATATGATGACCTGATCACTCCCACCCTGTCCCTTGCCAACCCATC Gene GeneID:100336808|LOC100336808:XM_002700009:20_cdna Constitutive 0 NULL GeneID:100336808 X GENE LOC100336808 NULL phosphorylase kinase, alpha 1 (muscle)-like EMBV3_12389 ATTACAGCCTACAAACAGCCAAGCAGCGTGATCCTGGAGCCTCCGGTCTTAATGGGCAGT Gene GeneID:514873|ICAM4:XM_002688841:159_cdna Constitutive 0 NULL GeneID:514873 7 GENE ICAM4 NULL intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) EMBV3_28901 GCAGCCAGAGCCGGAAGGGGGCAATCGCAGCCCCAGAGAGACATTATCTATAAAATTGTA Gene BVT0102_198235 + 0 NULL GK000015.2:48226155-48240554 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115686 TCONS_00206812 TCONS_00231338 TCONS_00066283 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00177370 TCONS_00175855 TCONS_00218945 TCONS_00169198 TCONS_00175580 TCONS_00250930 TCONS_00166977 TCONS_00008224 TCONS_00021569 TCONS_00137878 TCONS_00244654 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00038458 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00062744 TCONS_00109027 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00064462 TCONS_00178325 TCONS_00161667 TCONS_00010054 TCONS_00040836 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00110323 TCONS_00130290 TCONS_00063486 TCONS_00020756 TCONS_00249772 TCONS_00010471 TCONS_00088088 TCONS_00021595 TCONS_00117619 TCONS_00199424 TCONS_00161835 TCONS_00071033 TCONS_00059708 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00249569 TCONS_00116665 TCONS_00222114 TCONS_00131550 TCONS_00199037 TCONS_00122479 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00252353 TCONS_00224113 TCONS_00007677 TCONS_00229957 TCONS_00152736 TCONS_00116100 TCONS_00250720 TCONS_00169197 TCONS_00038381 TCONS_00242885 TCONS_00209846 TCONS_00023373 TCONS_00207069 TCONS_00175546 TCONS_00209711 TCONS_00116172 TCONS_00252107 TCONS_00148280 TCONS_00056146 TCONS_00249011 TCONS_00176735 TCONS_00031939 TCONS_00169199 TCONS_00131137 TCONS_00039951 TCONS_00063181 TCONS_00009259 TCONS_00111497 TCONS_00209636 TCONS_00019961 TCONS_00245928 TCONS_00089952 TCONS_00233372 TCONS_00244651 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00085967 TCONS_00039904 TCONS_00199802 TCONS_00207755 TCONS_00250246 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00064619 TCONS_00200529 TCONS_00244653 TCONS_00056820 TCONS_00135546 TCONS_00115148 TCONS_00250726 TCONS_00221884 TCONS_00142649 TCONS_00122313 TCONS_00251907 TCONS_00218552 TCONS_00007359 TCONS_00166449 TCONS_00031910 TCONS_00251929 127 XLOC_069855 XLOC_125332 XLOC_140827 XLOC_040997 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_107144 XLOC_105634 XLOC_132264 XLOC_103305 XLOC_105361 XLOC_153873 XLOC_101813 XLOC_003782 XLOC_012242 XLOC_084087 XLOC_150512 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_022282 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_037471 XLOC_064932 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_039186 XLOC_108098 XLOC_098554 XLOC_005606 XLOC_024650 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_066227 XLOC_079001 XLOC_038213 XLOC_011431 XLOC_152715 XLOC_006022 XLOC_052875 XLOC_012268 XLOC_071785 XLOC_121077 XLOC_098720 XLOC_042806 XLOC_036490 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_152512 XLOC_070831 XLOC_135423 XLOC_080255 XLOC_120690 XLOC_074034 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_155294 XLOC_137409 XLOC_003238 XLOC_139451 XLOC_092501 XLOC_070269 XLOC_153663 XLOC_022206 XLOC_149548 XLOC_128357 XLOC_014040 XLOC_125588 XLOC_105327 XLOC_128222 XLOC_070341 XLOC_155048 XLOC_090162 XLOC_033949 XLOC_151954 XLOC_106509 XLOC_018184 XLOC_079842 XLOC_023768 XLOC_037908 XLOC_004815 XLOC_067397 XLOC_128147 XLOC_010639 XLOC_150855 XLOC_054733 XLOC_142854 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_052005 XLOC_023721 XLOC_121454 XLOC_126270 XLOC_153189 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_039343 XLOC_122181 XLOC_034623 XLOC_081769 XLOC_069449 XLOC_153669 XLOC_135195 XLOC_087074 XLOC_073868 XLOC_154848 XLOC_131872 XLOC_002920 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00245928 XLOC_150855 Coding Coding - X:137876964-137888512 - TSS184515 5441 1 TCONS_00245928_4 267 0.927770630398824 2 0.528968563263185 0.000897282390755376 0.000985138621395062 0.000679966132465394 0.000237237831259057 0.000568011132192381 0.000175732963127942 0.00054373138769722 0.000124872322741693 0.000226377822321319 2.34408665786025e-05 4.06971677171706e-06 3.17881490021353e-06 5.53108689583375e-06 1.15952953248486e-05 7.90342605753742e-06 6.1146071856894e-05 1.4073564546935e-05 5.46125915401409e-05 0.000240415514785315 0.00031228486567747 0.000302687179985164 1.63930844339758e-05 1.94334604293771e-05 2.02916089306998e-05 0.000825095136962281 0.000873719722104107 0.000338522689881364 1.29717332028776e-05 8.41627519289757e-06 1.36053048170254e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1299 93.40 0.158426759786804 XR_248914.1 LOC101926889 PREDICTED: Homo sapiens uncharacterized LOC101926889 (LOC101926889), misc_RNA. 1e-27 131 70.31 0.053299025914354 TCONS_00245928_4 sp|Q10126|YSM6_CAEEL YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6; 3e-08 54.3 25.64 0.531835205992509 1 coding 1 1 1 1 -0.00467391936394584 0.982742153247782 -0.138493667873966 0.0421444453268451 GGTAGGATTGCATCTGATGGAAGCACTGGCCAACCAGAAAACTCCTGGATGCCAAAGTTTGGATGGAGGGGGAGCCAGAGGCACAGGTGCCAGAGAGTGAGTTGAAACCATATTAAGGCAAGGTGCCAAACATCAGGGTGTCCAAGTTTGTCCACAGATCAGGTGTGGGACTGGTGGAGAGAGGCAGGAAGTAGAACCAGAATATTTGGAGCTGAGAAGAGGCAGTGATGGAGCAGGAACTGAGAAAGAAATCCTGGAACCAGGATATTTTAATGTGTGGGGCTTCTCTGAGACAAGATTCCTCAAATATCCAGGAAACTTCTCACAAACCTACCTCTCATGACTACATTCAAATAAAGCTGCAATTAATGTGGTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAATCGTGAACTTCCAAATGTTCAAGCTGATTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCACTGGATCATCAAAAAAGCAAGAGAGTTCCAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGACTGTGTGGATCACAATAAACTGTGGAAAATTCTCAAAGAGATGGGAATACCAGACCACCTGATCTGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAAACGCTGGGCTGGAAGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAAAGCCTCTTGATGAAAGTGAAAGTGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCCTCCGGTCCTGTCACTTCATGGGAAATAGATGGACAAACAATGGAAACGGTGTCAGAATTTATTTTTTGGGGCTCCATAACCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAAACTAGACAGCAGATTAAAAAGCAGAGACATTACTTTGTCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGATAGTTGGACTATAAAGAAAGCTGAGGGGAAGAGCCAAGATGGCGGAGGTGTAGGATGGGGAGAACACTTTCTCCCCCACAAATTCATCAAAGAAGCATTTAAACACAGAGTAAATTCCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAACCCAAGTCTTCAAAAGGAGGTAGGAAAAAATATAAAAGACAAAAAAAAGAGACAAAAGAGGGAGGGACAGAGTTCCGTCCCGGGAAGGGAGTCTTAAAAAGAGAGAAGTTTCCAAACACCAGGAAACCTTCTCACTGCCGAATCTGTACCGAGCTTTGGAAGCACAAAGGGCAACATAACAGGGAGAAAAACAATTAAAACCCGCAGATTGTGAGCCCTACGGTAACTCCTCCAGCGGAGAAGCAGCGCAGACGCCTGCACACGCCATTAGCAAGCGGGGGCTGGGCAGGGAGTTGCGGCACGTGCTGCATCACTTAGAGTAAGGACCTGGCCTGAATACCCTGAGCGCTATCTGAGTGAATAATTTGGGCTAGCAAACCAGACTGTGGGATATCTACCACGCGAAAAGCCAGCCCCTAACCTAAGACACCACCAGGCCCGCACACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCATCTGGTGACAGGCAGCCAGAACTGGAAGGGAGCAATCGCAGCCCCAGAGAGACATTATCTATAAAACTGTAAGCAGGCTTCTTTGCTAACTAAAACTTCTTGAGGGTCTGGACGGTCAACATCTGCCTGAGAAGGTGTGCCAGTGCACACCTAGATAACCAAGCGACGGGGAGGCGATAAGTCGCAGCAGTTGCGCTCGCCAAACACCTCATCACCTGAGCTGCTTGGACCTGGGAAGGGCACAAAACGCAGGCCCAACCGAGTCTGTGCCTCTGAGGACTACCCGAGTGTCTGAACCTGAGTGGCTTGGAACTGGGAGGTGCAGGCAGCCCAGGGCCGGCCACGGATGGTTCCCAGCAGAGCAACCTAGAGCCTGAGCAGTGTGGGCAGGGAGGCTACACGCGCCGTGAGCGGGGGCAGACCCAGTGTGAATGAGGCACTTCGAGCACACGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAGTGTCCTCCACCGTCCCCTTTGTGTCAGGGCAGAAACCAGACACTGAAGAGACCAGCAAACAGAAGAAGCTATAACAGAGGGAACCACCTTGGAAGCTACAGGCAATAGATTAAAACCCTGTGGTTACTACCTACTACATAGGAAGGGGTCTATAGATCTTGAGAAATATAAGTCGGACAAAGGAACTAACCAAAAATGAACTGAACCCACAATACTCACAACAAAACCAGAGAAAGTCCTAGATATATTTTTACTGTTTTTACGATCATTCTTCTTTCTTTTTTTTTTTTAAATTTTTAAAAAAAATTTTAAGTCCTCTATTATTCCTTTAATTTTCACTTTTATAACCTATTACTTTGCAAAAAAAAAGACCCTATTTTTTTTTCTTCAGCAAACTTCATATATATATTTTTTATAATTTTTTGACCTTGTTTTTTTTTTTTCTTCTTCTTCTTTTCTTTAACATTGTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTAGCTTTTTGGTATTTGTTATCAATTTTGTACCTATAGTTTTTCTTATAATTTCTGTGACTTTTTTTTTCTCTGTTTCTTTCTTTTCTTCTTTTATATAACATTGTATATCTGAAATTCCAAACTCTACTCTAGGTTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGCGACTTTGTTTTTGTTTTTGTTTTTGTTTTCTCTCTCTCTTTCTTTTTCTTCTTCTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAACTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTATATTTTCTTTATAATTTTCGCGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAACCTCTACTCTAGATTTTTAATTTTTGCTTTTATGTATTTGTTACCAATTTTGTACCTTTAGGAACCCAATCTTCAGCACCCATTTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTTTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTGTGTGAACTTCTGTGTGTTCCAGACAGTGGAGAACACTTAGGGAACTGATTACTGGCTGGTTCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCTCCTTCCTCCTTCTTTGTATAACTCCGTGAACATCTCTGAGCAGTCCAGTTGTGGAGTGCACATAAGGAAGTGATTACTGGCTAGCCCACTCTCTCCACTATTGATTCCACCTCATCTCATTCGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACGCTGTGAACCTCTCTGGGTGACCCTCACGATAGAGAAACTTTTCATCTTTAACATAGATGTTTTATCAGTGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCAATAACTGGAAGTAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTACAAGGAACATTAATTGACAGGAGCTCATCAAACGCCTCCATACCTACACTGAAACCAAGCACCACACAAGGGCCAACAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCACTGAGCTTCAAGATACAGGTTGCCCAAAGACACCCCAAAACCAAAGACGTCTCATAACTCATTGCTGGACACTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAACCAGGAAACCTTGACGAGCCACCTGTACAAACCCACACACAGCAAGGAAATGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAAATCAGCAATTTAAACAAGATGAAGAGACAGAGGAATACCCAGCAGATAAAGAAACAGGATAAATGCCAACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATTATAGTGAAATTGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGAAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGTCAATATATAATGAATAATGCAATAAATGAAATTAGAAACAATCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATAGTAGAAATAATTGAATCAAGATAAAAGAAAAATGAATTAAAAGAAATGAGAATCTCAGAGACCTCCAGGACAATATTAAACGCTACAACATTCGAATCATAGGGGTCCCAGAAGAAGAAAACAAAAAGAAAGACCATGAGAAAATACTCGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGCGGAACACCCCAAGACACATATTAATCAAATTAACAAATATCAAACACAATGAACAAATATTAAAAACAGCAAGGGAAAAACAACAAATAACACACAAAGGAATTCCCATAAGGATAACAGCTGATCTTTCAGTAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGATAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAGCACAAAAACAGTGTATAAAATCAAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTGTCAGTAATTACCTTAAACGTAAATGGGTTGAATGCCCCAGCCAAAAGACATAGACTGGCTGAATG TCONS_00248504 r 5' 161696 TCONS_00248504 r 5' 161696 EMBV3_43157 CTCCCGAACTAGAACTTGAAGAACTAAATGAATGCAATGAGAGCAACGATGGAGCATCAT Variant GeneID:528655|PDK1:XM_002685323:183_cdna 776^852 3 EMBV3_01542 GeneID:528655 2 GENE PDK1 NULL pyruvate dehydrogenase kinase, isozyme 1 EMBV3_38743 TACCTCTCGACCACGTAGAAACCATGTAGGGGTCTCTAGCTATTTCTGTGGATGGCAGCC Gene BVT0102_051746 - 1 EMBV3_30593 GK000024.2:46635196-46653512 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33888 ATGGACTTCTTTTGAGGAAAGGTGTGACTGGGGACTGGAAAAATTACTTCACGGTGGCCC Gene GeneID:533560|SULT2A1:NM_001046353:310_cdna Constitutive 0 NULL GeneID:533560 18 GENE SULT2A1 MGC137091 sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 EMBV3_37860 ATCCCTCCCATGAGCAGCACCAACACCCTCACCATCAAAGTCTGTGGGTGTGACGTGAAT Gene GeneID:785475|CDH11:NM_001081624:486_cdna UTR3_Alt 2 NULL GeneID:785475 18 GENE CDH11 MGC152019 cadherin 11, type 2, OB-cadherin (osteoblast) EMBV3_43440 GGGAGATCCAGCTCAGCGTCGTGCAGACCGCATTTCCGGAAAAAGCGACGGGCTGAAAGA Variant GeneID:540423|MPZL2:NM_001015673:122_cdna 678^769 4 EMBV3_22744 GeneID:540423 15 GENE MPZL2 EVA1 myelin protein zero-like 2 EMBV3_05822 ATCCGTCAACCCGATGATACATCGTTGCTTTTACATGTTTCTCTACCACTTGGCCCTCCC Gene GeneID:521539|MAN2A1:XM_002707828:8_cdna Constitutive 0 NULL GeneID:521539 7 GENE MAN2A1 NULL mannosidase, alpha, class 2A, member 1 EMBV3_31265 AGACCAGCTTCACATTCAGCCTCCCATTCTGCAGCTCCAACCACATCGACCACTTCTTCT Gene GeneID:526047|LOC526047:XM_002686614:126_cdna Constitutive 0 NULL GeneID:526047 3 GENE LOC526047 NULL similar to olfactory receptor MOR208-1 EMBV3_01089 ACCAGAGCGGCCAGGAAGGCCGGGTGGTTTCGCCCAGTTGGCCTTAGTGTCAGGGGCCAA Gene GeneID:617590|SRRM3:XM_002698111:366_cdna Constitutive 0 NULL GeneID:617590 25 GENE SRRM3 NULL serine/arginine repetitive matrix 3 EMBV3_25298 AAGGAGTCACGTGGGGCTGTGGGAACTCGAGAACTTCCAGGTCCTGAGTCAGAGACACCT Variant GeneID:506895|HAX1:NM_001045953:97_cdna 207^370 2 EMBV3_33117 GeneID:506895 3 GENE HAX1 MGC137143 HCLS1 associated protein X-1 EMBV3_02042 CCTAGCCGCCAAAATGTGCAGCCAAGTGCTTTGCCACAATGAAGGAGTGTGTACAAGGAA Gene GeneID:353352|SPAM1:NM_001008413:19_cdna Constitutive 0 NULL GeneID:353352 4 GENE SPAM1 MGC134590 PH-20 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) EMBV3_04191 ACGTGAGTAGCGACGACGATGAGGACAGGCTCGTGATCGCCACCTAGGGGCTGTTTATTC Gene GeneID:529115|HIVEP1:XM_002697614:115_cdna Constitutive 0 NULL GeneID:529115 23 GENE HIVEP1 NULL human immunodeficiency virus type I enhancer binding protein 1 EMBV3_37048 TCTGGAAACACACACACTATGTGCCCACAGTTGAAAACACAGTAACAATAGTAATGATAG Gene GeneID:100337294|LOC100337294:XM_002694494:364_cdna Constitutive 0 NULL GeneID:100337294 17 GENE LOC100337294 NULL anaphase promoting complex subunit 7-like EMBV3_31410 GGAGAAAACAAGGAAGTTTTATGCCATTGGGTTTGGCAATGACGTCTTGGATATAACACC Gene BVT0102_276290 + 1 EMBV3_00418 GK000015.2:25314099-25366837 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03130 GGGCGCATTCATCTCCATCACCTCTGTCGGAACACCATGTCCTGAGAACAGCTTCCTTTT Gene GeneID:532571|WWC2:XM_002698669:149_cdna Constitutive 2 NULL GeneID:532571 27 GENE WWC2 NULL WW and C2 domain containing 2 EMBV3_06853 AGCAGTCTTATCTCTCCTATCCCCAAACCAGAAACTGGACTAAGGGCAAAACTTGTAAGG Gene GeneID:538517|ARRDC4:XM_002696505:90_cdna Constitutive 1 NULL GeneID:538517 21 GENE ARRDC4 NULL arrestin domain containing 4 EMBV3_11893 TTGCATCCCAGAAATGGACTGAGGTGAATCTGGGGGACAAACTACTGCTGAACTGCTCAG Gene GeneID:537487|IGSF10:XM_002685003:123_cdna UTR3_Alt 2 NULL GeneID:537487 1 GENE IGSF10 NULL immunoglobulin superfamily, member 10 EMBV3_43692 TGGTCCTGGGCTGGAGGATCAGTCATTGGCTTGGTCGTGACAGTAGCCATTTTCCAACTA Gene GeneID:787433|LOC787433:XM_002688598:340_cdna Constitutive 0 NULL GeneID:787433 7 GENE LOC787433 NULL similar to LOC508140 EMBV3_18296 CAGCTGTATGCCCTTGGACAAGTCATTTCATAAATCATCCTCTGTCTCTGTAAAGCAGGG Gene BVT0102_285744 + 0 NULL GK000021.2:31983705-31993936 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20837 GATATCAACTTGGTAGAGACAAGCGGTACCAGTGTCCCCCACAGTCATGGAGAACATTGA Gene BVT0101_001322 + 0 NULL GK000021.2:31740283-31815395 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120991 TCONS_00120993 TCONS_00120998 1 XLOC_073315 Coding TCONS_00120993 XLOC_073315 Coding Coding LOC100848238 21:31740989-31859927 j TSS90250 2377 2 TCONS_00120993_1 116 0.225073622212873 9 0.980090299906673 8.44835686435832e-05 1.15910088778106e-15 5.05141979693895e-08 4.02982295488036e-08 0.00035821359241334 1.47318955868007e-13 7.24355125814553e-05 0.0002693981201983 0.000148531257967203 2.45968805117627e-08 5.79265782169026e-25 3.81034499192001e-13 7.84225758997074e-27 7.35556030745473e-20 7.74216186493417e-12 0.000110016499612612 6.99581837118276e-17 2.27196490997475e-12 1.37782563780049e-06 5.13452639439229e-16 0.000102417391422499 1.65064599564996e-18 3.74782278636949e-13 8.67262024075304e-08 1.63929964905966e-08 0.00025351862211334 0.000187840506472171 3.28060427441358e-08 2.81515533013278e-08 0 XM_005222002.1 NRG4 PREDICTED: Bos taurus neuregulin 4 (NRG4), transcript variant X5, 0.0 2872 99.14 0.676482961716449 NM_138573.3 NRG4 Homo sapiens neuregulin 4 (NRG4), mRNA. 1e-155 554 86.54 0.196466133782078 TCONS_00120993_1 sp|Q8WWG1|NRG4_HUMAN NRG4_HUMAN Pro-neuregulin-4, membrane-bound isoform; 1e-68 206 85.34 0.991379310344828 0 noncoding 1 0 1 1 -1.48073896423753 0.0337011788129277 0.0265326831709806 0.575016404505533 CGGCTCGCGCCTGGGCCCGAACGCAGCGCGCAGATATATCTGCTTCTAATGTGGCTGTAATTACCATGCTCTTCCATACCAAAATATCTTTTGAGCAGCTACAATTTCTATCAAAGCAGAAGAAATAGAGGTGAACTATAAAGCTAGTTTCCTCTCTACCCTGCAATCTGGAGAAAAACTTTCTCCCAAGGACAAAACAGGTGCTGTTTTTCAACCCTAAACTTTCAGCCAAGAATGAAACTATTTAGAAGTTAAGATGACAACAGATCACGAAGAGCCCTGTGGTCCTAGTCACAGGTCATTCTGCTTGAATGGAGGACTTTGTTATGTGATACCTACTATTCCCAGCCCGTTTTGTAGATGCATTGAAAATTATACAGGCGCTCGTTGTGAAGAGGTTTTTCTCCCAAGCTCCAGTATCCAAACTAAAAGTGACCTGTTCACAGCTTTCGTGGCATTGACTGTTCTTCTGGGAACTCTTATCCTTGGAGCCCTCTACTTCCTCTGCAGGAAGGGCCATCTTCAGAGGGCCAGTTCAGTCCAGTATGATATCAACTTGGTAGAGACAAGCGGTACCAGTGTCCCCCACAGTCATGGAGAACATTGAAGAAATAACACAGTGAAGCCAAATCATTGCTTCTTTGTTACAAAGGCAGAAAGTGAAACACTAAATGGTTTTTCATAAAGCAAGACTCAAATTGTTTCTACAAGTGAAAACCAAGTCAGTCATCTAAAATCTCAATTTCAAATCAAGAGGATTTAGAGTCTTCTGTTTTTATTAAAATGGAATTTATGGTGGTGTTTAAATGGGTTAGGCTGTGTGGGCACAAAATGACACAAGTAGATTTAATTATTTTCTCAAAAATTCCTGTAGAATGCATAGGAAATTATCAGATTTGTAGAAGTTTATTTTACATTCTTTCATGTTCACTGTGTCAAATTTGCAGTATAAATCAGTGGCAAAACCTTTGCTGTTCGGCTTCTCTTACTAGATTGAAAAGTGGTTTTATTTACCAGTGGTCCAGGTTTAAGCAAAGTTGAGAATTACAGCAATGAACTGGCCTTCTGGGCCTCTTCATTAGTCTAGGTCACAGGCTATTAACTACAACAATATGCAGGATGTCTGTTGCCAGGTCTTAATCCCAAGCTTCCCTCCTCTTCCTTACATTGTTACTTGGCTTTTCAAGGAGTTTATTCCTTGAAGCAGACTTTAACAAGGCAAATTGTAGCTGCAGAAAGATTCTGCTTTGAAAGCACATAAGAAAGCATTTTTTAAACATTTTGATTGAATAAACAATCCTGTCAACCCTGTCACTTGACAGAAGGCAGTTCAGTATGCAGACACTAAGAATACATCTTTAGTTTTTTTATACCCGTGTTGATTTTTTCACGTGATCATTTTTCCGGTTTCACAAATGACTATACAACAGTTGCCATTCTAGGAATTTAATGTTTTTAGCTGAAACAGTAATAATGCTTGCTTTTAAGACAAGCCTTTCAAAAACAGCTAAATACTAATATTCAAAAAATATTCGATTGCAATCAAACTTTTCTTTGGACTTTCTTCTCACTCCAGTACTCTCGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCACACAGTCAGAAAAGACGGAGGCAACTTAGCAGCAGCAGCAGGAACTAATATTGAGGATAATCATAATCTAAAGAAACTTTAAAGTATTTTCATCATTCATATAAATAGCAGAAAGAAAATCTTTTGGAGTAAAAACTGGTTTAACAAATTATTGAAAACAGAAAAGTGTGAATGTTCATCTATTTTGATTTCACTTACCTTGCAAGTTTCCGTCTATGCTGCTAGAACCACTGACTGTTACAAAAGGGCCATAGTTATGTCGTACATATTAGAATATGCTAATACACATGTCCTGTAACAAAGACCTGGGAAGAAAACAAGTGGCTTAGGCAAGACTGATTTTAATTTCTGTCTTGTAAAACAGTTTAAAGAGAGGCAGTCCAGATCAGTTATGCACTTCAACAAAAAACTGTATACTCTTCTGTATGGTTCTCTTCCACAAAACAGCATTGACTCTGCTGTGGAGTCTAAGATGGCTCACTACCATATCCACTTCTAAGCAACAGGATTGATTAAAGGAAAACAAAACAAAAACGGTCATACTTTTAAAGGAAATATTATCATTTCCCTCACACTTCACTGTCCTGAATAGTCATACTTGCAAGGGAGACTAGGAAATGTAGGCTTTATTCTGGTGTGCGTGTGCCTGGCTAAAAACCAAAGGTGTTATCTGTGTGAACAGGAAAGAATAGATATCAGGAGAAAATTGGTATTCTCTGCCCCTATTTTGATATATTTTC EMBV3_20449 CAGCTTCCGTGACAGTGCCACCAGTAGCAGTGACACAGAGACCACCGAGGTGCATGCACT Gene GeneID:505569|CLCN2:NM_001102487:13_cdna Constitutive 0 NULL GeneID:505569 1 GENE CLCN2 CLC-2 CLC2 MGC139321 chloride channel 2 EMBV3_37912 GGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGT Gene GeneID:536348|NFIX:XM_002688747:92_cdna Constitutive 0 NULL GeneID:536348 7 GENE NFIX NULL nuclear factor I/X (CCAAT-binding transcription factor) EMBV3_35670 CCTCCAAATCTCTTGCTTGTCATTGACTCTAGCGTGACAATTTCGCTCAGGATCTATTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04903 TTGTAATAAAAAGCTAGTTTCCTGAGTGAAGGAAGCCACACCCCCGCCCCTTAGCACCAC Gene GeneID:529053|DNALI1:XM_002686548:797_cdna Constitutive 0 NULL GeneID:529053 3 GENE DNALI1 NULL dynein, axonemal, light intermediate chain 1 EMBV3_02328 GTACCCATCAAGGCTGAGCATTTTCAGATGACATCTGCCGTCAGCTTCCATTTTTTTCAG Gene GeneID:505013|GIMAP5:NM_001079769:583_cdna Constitutive 0 NULL GeneID:505013 4 GENE GIMAP5 NULL GTPase, IMAP family member 5 EMBV3_41734 GAGTGAGAATGGCTACATGTGAGAACAAATGTGGATTTGCTGGAGCCTGGTAACTGACTC Gene BVT0102_321202 - 1 EMBV3_12443 GK000030.2:128650610-128669634 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38637 ACCGCACGGGCTCTGCTGCACTGGTGTGGTTGTCGTTTTTCTGTTTGGATTCTCCTATTT Gene GeneID:281152|FASN:NM_001012669:15_cdna Constitutive 0 NULL GeneID:281152 19 GENE FASN NULL fatty acid synthase EMBV3_32643 GAATCATCCTGTGTGCTTGGAATCCAAAAGCCAGGTGACTTCGTGCACACTCTGGGAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41752 GCGGCCCGCCGGGGTGACGGAGCTCACTGCGGGGATGACAGTCTGTCTGCGATCACCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11610 TTGTCAAGTGCAGAAGTTGTTGTTCCCCGTGACCAGACTCCTGATGAGAATGACCAGGTG Gene GeneID:539650|IGF2BP3:XM_002686716:65_cdna UTR3_Alt 3 NULL GeneID:539650 4 GENE IGF2BP3 NULL insulin-like growth factor 2 mRNA binding protein 3 EMBV3_29925 CTTTGTCTAAGAGTCAGGGTCAAGGTGAGGTTTAGGGAACACGAGGCTAAGGTTTAGGCC Gene GeneID:509658|MOGAT2:NM_001104970:19_cdna Constitutive 0 NULL GeneID:509658 15 GENE MOGAT2 NULL monoacylglycerol O-acyltransferase 2 EMBV3_42057 AGGTTCTTCAGCCATGGATTGTGGTGAATCTGGTGGTGGCCGTTCTGGTTGGGTTATCTT Gene GeneID:515467|ALS2CR4:NM_001046200:110_cdna UTR3_Alt 2 NULL GeneID:515467 2 GENE ALS2CR4 MGC137548 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 EMBV3_42839 GTGGACTGACAGAAGTCTCTATTTATCGGGGTGGGAAGAGGGGTCACATTGATTTGGGGG Gene GeneID:512380|EML2:XR_083929:803_cdna Constitutive 0 NULL GeneID:512380 18 PSEUDO EML2 NULL similar to mCG4871 EMBV3_00026 TGGCCAAGCCAGCACCCCACACTGGAGCCATCTCTTACTTGTATTTTGGCAGTGGAGCCG Gene GeneID:517456|PXN:XM_002694523:446_cdna Constitutive 0 NULL GeneID:517456 17 GENE PXN NULL paxillin EMBV3_01925 AGATGTTCTTCAAGCCTTCTCTGATCAAGTCCATGCAGCTGGGCCTCCACACCCAGACGG Gene GeneID:540296|ACTL7A:NM_001038570:13_cdna Constitutive 0 NULL GeneID:540296 8 GENE ACTL7A MGC134129 actin-like 7A EMBV3_43310 ATAGCGAGCAGCACCAGCGATAGGTTGTGGTTGAAGGTCAGTGAGGATCGGTATGAGTGA Gene BVT0102_281751 + 1 EMBV3_21007 GK000019.2:22186259-22194037 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05636 GGAACATCCGGCAGGAATTCTAGAGACAGGGGCAAAGGTGGAAATGGCCAGGAAAATTCA Gene GeneID:504339|C14H8orf47:NM_001077844:18_cdna UTR3_Alt 2 NULL GeneID:504339 14 GENE C14H8orf47 C8orf47 chromosome 8 open reading frame 47 ortholog EMBV3_41045 CCAAACAGGACAAACCCAAGGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAG Gene BVV0102_224194 + 1 EMBV3_17866 GK000030.2:103538945-103838486 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00066191 TCONS_00207277 TCONS_00022579 TCONS_00156637 TCONS_00214738 TCONS_00249013 TCONS_00198570 TCONS_00115729 TCONS_00137809 TCONS_00220662 TCONS_00187806 TCONS_00252354 TCONS_00091329 TCONS_00189889 TCONS_00006357 TCONS_00210523 TCONS_00244654 TCONS_00187583 TCONS_00239690 TCONS_00091802 TCONS_00249282 TCONS_00231021 TCONS_00189806 TCONS_00152647 TCONS_00056970 TCONS_00230725 TCONS_00148670 TCONS_00062742 TCONS_00117462 TCONS_00175821 TCONS_00250939 TCONS_00248778 TCONS_00245928 TCONS_00141532 TCONS_00020011 TCONS_00122032 TCONS_00249881 TCONS_00064058 TCONS_00238893 TCONS_00251214 TCONS_00244651 TCONS_00008117 TCONS_00040697 TCONS_00233559 TCONS_00240534 TCONS_00238308 TCONS_00207366 TCONS_00160965 TCONS_00152860 TCONS_00022065 TCONS_00032588 TCONS_00178020 TCONS_00251916 TCONS_00020016 TCONS_00210648 TCONS_00232347 TCONS_00108588 TCONS_00210178 TCONS_00251452 TCONS_00017462 TCONS_00244653 TCONS_00156686 TCONS_00253720 TCONS_00207754 TCONS_00032671 TCONS_00135548 TCONS_00020171 TCONS_00222057 TCONS_00056147 TCONS_00021194 TCONS_00238446 TCONS_00019991 TCONS_00175849 TCONS_00019197 TCONS_00224114 TCONS_00036946 TCONS_00008834 TCONS_00020022 TCONS_00037883 TCONS_00198661 81 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_040908 XLOC_125795 XLOC_013249 XLOC_095097 XLOC_130757 XLOC_151956 XLOC_120224 XLOC_069898 XLOC_084019 XLOC_133979 XLOC_113849 XLOC_155295 XLOC_056104 XLOC_115926 XLOC_001920 XLOC_129033 XLOC_150512 XLOC_113628 XLOC_146355 XLOC_056573 XLOC_152225 XLOC_140510 XLOC_115843 XLOC_092412 XLOC_034773 XLOC_140215 XLOC_090550 XLOC_037469 XLOC_071628 XLOC_105600 XLOC_153882 XLOC_151721 XLOC_150855 XLOC_085960 XLOC_010689 XLOC_073588 XLOC_152824 XLOC_038784 XLOC_145559 XLOC_154157 XLOC_003677 XLOC_024513 XLOC_143041 XLOC_147198 XLOC_144975 XLOC_125883 XLOC_097858 XLOC_092625 XLOC_012736 XLOC_018828 XLOC_107793 XLOC_154857 XLOC_010694 XLOC_129158 XLOC_141832 XLOC_064493 XLOC_128688 XLOC_154393 XLOC_009039 XLOC_095146 XLOC_156659 XLOC_126269 XLOC_018911 XLOC_081771 XLOC_010849 XLOC_135366 XLOC_033950 XLOC_011867 XLOC_145113 XLOC_010669 XLOC_105628 XLOC_009877 XLOC_137410 XLOC_021259 XLOC_004391 XLOC_010700 XLOC_021712 XLOC_120315 Coding TCONS_00222057 XLOC_135366 Coding Coding - 7:70682995-70686837 - TSS166055 3842 2 TCONS_00222057_5 115 0.997917751171265 1 0 5.05901659931964e-07 4.79493141964255e-06 0 0 5.71135386159485e-07 1.33005749818789e-07 0 1.71054331302813e-07 1.30064629441795e-06 1.07092175724304e-06 1.48958039000441e-07 4.13638474427097e-06 0 2.44871816558218e-07 1.59623789052634e-07 0.00332700385437757 0.000192296171611 0.00859026605852141 1.86645827677117e-06 1.07770000193695e-05 6.58452760786576e-07 0.000464821333825734 0.000262264095623234 0.000504714169171867 5.63546402276529e-06 1.83380325625921e-06 1.6944788577739e-06 4.58341979923324e-06 6.31781897174857e-06 2.73853284638068e-06 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-114 417 93.48 0.0715773034877668 TCONS_00222057_9 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 2e-22 90.9 45.26 0.92156862745098 1 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 CCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGAGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGGATGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCCTGGGGTCGCAAAGAGTTGGACACACTGAGCGACTGAACTGAACTGAACTGAAGACATCACCAGACCCACTCACAGAACAAAGGACTGAGCAGAACTAGCCAGCTGTGGATGGGCCCATCCCCCACCGGAGACAAGCAGGGGAGGGCAGCCAGAGCCGGAAGGGGGCAATCTCGACCTCAGAGAGGCATCCTCTACCAAACTGCAAGCAGGCTTCACTGCTAACCAAGACTTCTTGGGATTCTGGATGGTCAATCCACTGGGAGGATCACAACCAGAGATCAGCCTCCCAGAAGAGACACACAGATCACCTGAGAAGGCGCGGCCGCTGTACACCCAGAACACCGAGCGCCGGACGGGGAGGCCATAAGACACAGCCTCCAACAGGGGGTGGGGGACTGTACTCACCAAACACCTGGTCACCTGAGCTGCTCGGACCTGGGAAGGGCACAAAATGCAGGCCCAACCAAGTCTGAGCCTTTGTGGACTACCCGAGAGCCTGAACCTGAGCGGCTTAGACCTGGGCAGTGCATGCAACCCAGGGCCTGCCACAGACAGTTCCCCGCAGAGCAACCTAGAGCCTGAGCAGTGTAGACTGGGAAAGCACACACGCCGTGAGCAGGGGCAAACCTGGTGTGGCCGAGACACTGCGAGCACTCCCCACACATGCCAGTGATATTTGTTTGCAGTGTTCCTCCCTCCCCACAGCACGATTGAACAAGTGAGCCTAAGAAAAGTGACCTCCACCAGCCCCTTGTGTCAGGGCGGAAATTAGACACTGAAGAGACCAGCAAACAGAAGAAGCTAAAATAAACAGAAGGAACCGCTTTGGAAGTGAGAGGTGCAATAGATTAAAACCCTGTAGTTAACACCGACTACATAGGAAGGGGCCTATAGATCTTGAAGAACTATAAGCCAGAGCGAGGAACTATCTGAAAATGAACTGCCCCAAACTGTCTGCAACAGCTCCAGAGAAAGTCCTAGATATATTTTTTACTATTATCATTTTATAAATTTTCATAAAATTTTTTATATTTTTAAGTCCTATATTACTCCTTTAATTTTTATTTTTATAACCTACTACTACTACTACTCAGTCGCTTCAGTCATGTCCGATTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATTGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTATAACCTACTATTACCTTGCAAAAAAAAAAAAAAAAAAAAAAGACCCTATTTTTAAAGCAAACTTCATATATATCTATATATTTTTTATAATTTTGTGACTTTGTTTTGTTTTTTTTAATATTGTATTTTTGAGAATCTAACCTCTACTCTAGATTTTTAATCTTTGCTTTTTGGTATTTGTTATCAATTTTGTACATTTAAGAACCCAATCTTCAGTACCCATTTTTACTTGGGAGTGAGATTACTGGCCTGATTGCTGTCTCCCCCTTTTGACTCTTCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCCTTCTCTTCTCTACCCAACTCTATGAATCTCTTTGTGTGTTCCAGGCTGTGGAGAACACTTAGGGAACTGATGACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCGCCTATTATCCTCCTGGCTACCTCTGTCTCTCTCCTTTTGATTCCACCTATTATCCTTCTGACTACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCATGAACATCTCTGAGGGATCCAGACTGTGGAGAACACATAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCCCTTTTGATTCCCACTCTTCTCCAAACCCACTGACATCTCAAAACTCACTACTGGACACTTCATTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAGCACTGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCCATCCAACCCCACCCACAGTGAGGAACCTCCAAAATAAAAAGGAACCACAAACTGCCAGAATATGGAAAGGCCACCCCAAACACAGCATTATAAACAAGATGAAATGGCAGAAAAATACTCATCAGGTAAAGGAACAGGATAAATGCCCATCAAACTAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAAATGACCCAAAATCTTGAAAACAAAACGGAGTCACAGATAAGTAGCCTGGAGACAAGGATTGGGAATATGCAACAAATGTTGAACAAGGACCTAGAAGAAATAAAAGAGACAATATATAATGAATAATGCAATAAATGAGATCAAAACCCTCTGGAGGGAACCAACAGTAGAATAATGGAAGCAGAAGATAGGATAAATGAGGTAGAAGGAGTGTTAGAAATAAATGAAACAGAGAGGAAAAAAGAATTAAAAGAAATGAGGACAAACTCAGAGACCTCTGGGACAATGTTAAACAACCCAACATTCGAATCATAGGAGTCCCAGAAGAAGAAGACAAACAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAGTCACCCAAGTCCAAGAAACCCAGAGAGTCCTAAACAGGGTAAACCCAAAGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAGTATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGAAGGGAATGGCAGGACATACTTAAAGTGATGAAAAAGGAAAAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCACTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAGAAAGGGTGTATAAACTCAAACCCAAAACAACAAAGTAAACGGCATTGGGATCATACTTATCAATAATTACCTTAAATGAAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAAAAACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGTGATGGAAAAAGATATTCCATGCAAATAGAGACCAAAAGAAAGCAGGAATAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAGGAAACAAAGAAGGATACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACATAGGACCACCACACTATGTAAGACAAATGCTAACAAGTATGAAAGGGAAATTAACAGTAACACAATAATAGAGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAAATAAACAGAAAAT TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 24667 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 28508 EMBV3_00342 AGAAATTGCAAGAGACCAAGAGAGTTAGAGATATGAGCAAGGAAATTAATCTAATGCTGT Variant GeneID:506012|TEX12:NM_001034263:44_cdna 131^242 2 EMBV3_31980 GeneID:506012 15 GENE TEX12 MGC127869 testis expressed 12 EMBV3_35093 GTCAAAAACTACAGGTTTCACACCAAGAAGGATCCGGGGTGTTGGAACAGCAGCTCTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03555 AAAGGCTTACTCTGAGCGTCGGATCATGGGGCTGTTTGCACTGATGGCAAGCTCTTCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17192 ATCCTTGCTGTGCCAGCGTTTCCCACTCCCATGCACTTTTTCACCACACGGATGAAAAGT Gene GeneID:533323|PDE3B:XM_002693045:322_cdna Constitutive 0 NULL GeneID:533323 15 GENE PDE3B NULL phosphodiesterase 3B, cGMP-inhibited EMBV3_00434 GTGGTGAGAGACCTTTTGAATGTAACAAATGTGGGAAGTGCTTTAGGCTCAGTTCAAGCC Gene GeneID:787397|LOC787397:XM_002695032:322_cdna Constitutive 0 NULL GeneID:787397 18 GENE LOC787397 NULL similar to zinc finger protein 607 EMBV3_00841 AGGGGGCCCTGCTCCTGTTGTAGAGTTCTTAGTTAGAATGGTCTGGGTTTTCTGTGTTCC Gene BVT0102_386400 + 0 NULL GK000018.2:11189742-11196383 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088387 1 XLOC_053174 NonCoding TCONS_00088387 XLOC_053174 NonCoding NonCoding - 18:11192546-11193880 - TSS65733 1334 2 TCONS_00088387_2 91 1 0 0 0 0 0 0 0 0 0 0.000112378195508602 8.01928335947449e-05 0 0 0 0 0 0.0010295353382437 0 0 9.13835900071265e-05 0 0 5.56272401247063e-06 6.87709920042765e-06 0.00090483768562542 0 5.28146029393455e-06 0 0 0 0 XM_005218402.1 FAM92B PREDICTED: Bos taurus family with sequence similarity 92, member B (FAM92B), transcript variant X1, mRNA. 0.0 2406 100.00 0.999250374812594 NM_014732.2 KIAA0513 Homo sapiens KIAA0513 (KIAA0513), mRNA. 2e-36 158 82.91 0.116941529235382 0 noncoding 0 0 0 0 -0.126115992776132 0.339876738025771 0.0781539579437393 0.206006939226011 TTTGCCAGAGGAGTGGGGAGACTGGGAAGGAAGGGGAAGGGGAAGGGCCCTGCAGCAGCCTCGGGGGAGGGGGCAGCAGCTGGGCCATCCCAGGCTGGTCACCCCATTGGCTACTCACTTCTTCAGCCAGGGACAGAGCTGCGGGTTTGGGGGTCCACTGCCCCAGGGTTGTTCTTGTTCCCCCATCCAGAGCCCTTTAATTCCCTTGAGCCGCACCACAGTACCTCCCTGTGGCCATGTGGCCAGGAGCAGGGCTGTGAGGGTTATCCAGAGAGCAGACATGGGGAGCATTTCCAGATGGTTCCCATCCAGCGGTACCTATCCAGGAGCGTCAAGATGCTCCTCATGGCTCCCCAGGCCTGTTCTGCTGCTGTCTCCCCGCTGTCCCTCCCCAAGCAAGCGCCTCAGACACGGTCTGCCTTGTCCCTAGGTGGCCTGGCTCTGGCCTGTGTCCCCAAGTCGGCTGATCGGTCTGAGCTTGAGACGAGTGGAAAGCTGGGGAGAGGACCCTCCCCTTGGCTGTGTCCCCAGGATTCAAGGGGGCCCTGCTCCTGTTGTAGAGTTCTTAGTTAGAATGGTCTGGGTTTTCTGTGTTCCCATCACTTCTCACAGGATCTCTGTGCAGGAGGGGTGACCTGCATCCTGACATGTCCTGCAGGGTCAGACCAGGGTGCTGTCTCTCATCACCCTCCTGAGTGGTGTGCTGAGCTCGGAGGAGGGCTCCTGGTGATGCCCCTTGGAGCCTTAGCAGGGCTACATCTGTCCTCTCCTTGGTCCAGGATGATACGCTTGTGGAAACAGAAGTGCTCAATGGGCTTTGTTCCAATGCACGGGCCCCACATGAGGGCCCTGGTCTGTCCCTGTGCTGGAGGCTTGGGAGTCCCATGGACACCTTGAGAAGGACAGGCCAACCGAAGGAGATGCTCACACTCAGATGGCAGGCCCTTCGCCTTAAAATGTGTAGGTGAGAGAGCTTCGTGGCCCTAACCATGGCCTCTGGGCTGCAGAAGGGTCTCCCGCGTGCTTTCCCTGTTTCTCTCCCGCCCGTTGGTCTTGGACCCAAACATCCCATTGGCCACTTCCACACATTGCCCTTAGTGACCCAGAAATCAGGGTCAGTGATTCGAGTGTGTTATATGTATGGTTTCACAGTTTTATATCCCATGAGGTTGCGTTCTACAAACTGTATTTTCAGGTGGAGAAAGTTTCAAGATTGAGCTCTGAAAACAGCGCTAAAATCAAAGCTGTTTCCTGTGAAGAAAAAAAAAAGTCCATATATTGCACCTCAGATTGTCAAAAGGTGGAAACTGAAATAAATTATCTCTAAAAAGGAA TCONS_00085419 . 3' 2504 TCONS_00085419 . 3' 3837 EMBV3_18650 CAAGTCTACTGAGAATAGTTTTAAAGCTATGCAGAAAAGGGAACTGTTATTCACACTGCC Gene GeneID:783258|DCP1A:NM_001102330:340_cdna Constitutive 2 NULL GeneID:783258 22 GENE DCP1A MGC159576 DCP1 decapping enzyme homolog A (S. cerevisiae) EMBV3_25939 CCAGTGTTGGGATCGGGGTTAGGATGGGAGGGAATCCTTGCTTTTGTCAACATGGCTGTT Gene BVT0102_095522 - 0 NULL GK000017.2:69588471-69654492 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078038 TCONS_00078039 TCONS_00076107 TCONS_00078037 TCONS_00076105 TCONS_00076106 2 XLOC_047208 XLOC_046737 Coding TCONS_00078037 XLOC_047208 Coding Coding TTC28 17:69652220-69662544 j TSS58161 6444 1 TCONS_00078037_2 623 0.0220360024829299 4 0.376150343892279 0.0014460485405161 0.000197487871469395 0.000662823255335527 0.00029629781858624 0.0010312804843712 0.000101956482528664 0.000369064282618359 0.000305307862789859 0.000534526072752711 5.00490310774802e-37 4.22198235977881e-109 5.97092212754033e-309 9.97933016561037e-05 5.94313674245864e-14 5.37163375691552e-05 0.000246508611499046 0.000275569977812623 2.65067741089032e-05 0.000146035865762202 1.02752718203226e-13 0.000214107764729381 1.30035590979971e-10 6.9224057702649e-05 0.0001896150207306 0.00107419189145511 0.0011358472857785 0.000655354655914017 6.58038986577829e-06 6.00205754417057e-05 0.000292449282045545 XM_002694620.3 TTC28 PREDICTED: Bos taurus tetratricopeptide repeat domain 28 (TTC28), 0.0 1.017e+04 100.00 0.874456859093731 NM_001145418.1 TTC28 Homo sapiens tetratricopeptide repeat domain 28 (TTC28), mRNA. 0.0 1957 82.26 0.296865301055245 TCONS_00078037_2 sp|Q96AY4|TTC28_HUMAN TTC28_HUMAN Tetratricopeptide repeat protein 28; 0.0 996 87.30 0.998394863563403 0 coding 1 1 0 0 0.025591089973666 0.845372887153262 0.00422296645652618 0.932978344007048 CTGGAACAACCCTCTGGTGACAATGTAGTGACCCCTGAAGAGGATGGAGTGGTTTTCTGAAGTGTAATAATTTGACAAAGTAATATACATTAGTAGGTCTTTATCAGCAGATTTCCTTTTAGTGGAGCTGTTTATCTGGAAATAAGCTGCTCCTTCGAGGGTTCAGCCCTGGCACCTCTCCCCCCGCTGCCTGGGTGGTTTCCACCCTGATTCGGAGCATAGCTCACTGATCGTGAGTTTCTGCTCATTTTGTAATAAGTGTTAGGATCTGCTTGTTGGGGAGAATCAGGAAGACACTTCAGGGCTACAAGCCTGTGCTCTTCCAAGAGAAAAGGCTAGAGGCGCGTGTGCAGGGTGAGGCTGAGCATCGGAGCCAACTGCTTACTTTCTTGCTTTGGGTGGCAGCACGGGGACCTCCACAGCCCCTGCCCCGGGACGGCAGGCACTTCTGAGCCACTCGAATTGGAGACTCTGCTTTGGAGTGGCCACGAGGGCCCGCGGTCCCGTGCCCCGTCCTGGTGAGGAAGGGCAGGCGGCGACCTCTGGGGCGTCTGGCGGGTGTGGCTGCGCCTTCTCCTGTGTCCCTGCTGACTCTCGCTCCTCTCCGCTGCCCGCCGGGTCAGAGCCAGCCCGTGTGGTGCTTCCTACAGCAGTGATCAGCTTGTGGTGCATAACAACCTGTGCTTGAGTCTAAACTCTCTTCTCTTTCTTTCTCTCTTTTTCTTATACTCTGCTGGCCGAAGGCTGTTAAAAATATGGTTGGAATGCTCCACCAGGTGCTGGTGCAGCTGCAGGCCGGCGAGAAGGAGCAGGACTTCGCCTCAGCGCCCATCCAGGTCTCCATCAGCGTCCAGCTGTGGCGGCTCCCCGGCTGCCACGAGTTCCTGGCGGCTCTAGGTTTTGATCTCTGTGAGGTCGGTCAGGAGGAAGTAATCCTGAAAACCGGGAAACAAGCCAACCGACGGACCATGCACTTTGCGCTCCAGGCCCTGCTCGCGCTCTTCGATTCCACGGAGCTGCCCAAGCGCCTCAGCCTGGACAGCTCGTCCTCCCTGGAGTCGCTGGCCTCGGCCCAGTCTGTCTCCAACGCTCTGCCCCTGGGCTTCCAGCACCCTCCTTTCTCCCCGACCGGGGCAGAGAGCATAGCCTCAGACGCCATCTCTGTGTACAGCCTGAGCTCCATTGCCTCCTCCATGAGCTTCGTCTCCAAGCCTGACGGGGGGTCAGAAGGCGCGGTCCCTCGGGGACGGCAGGACTACGAGCGGTCCAAGAACACCTACCCCCCTCGCGCTGCCCTGCCCCGGAGCCCGCTGTCCCCGCCTGCCCGCCCTGCAGGCGCCAAGGACGAGGAGGAGTACGAGGGGTTCTCCATCATTAGCACAGAGCCCTTGGCGGCCTCCCAGGAGGACCCACCGACGGGCTTCTCACCCGACCACAAGCAGTCCCTCGTGGGGACAGCGGGCGGCGTCAAAGTCTCGGTGAGCTCAAGCACTCCAAACTCTCCCGTTAAAATGACTCTGATTCCCAGCCCAAACTCACCCTTCCAGAAAGTTGGAAAACTAGCAAGTTCAGATACGGGAGAATCAGACCAGTCGAGCACAGAAACAGATAGTACCGTGAAGTCCCAAGAAGAAAGTAACTCAAAGCTTGACCCTCAAGAGCTGGCACAGAAGATTCTCGAGGAGACACAAAGCCATCTCATGGCAGTGGAGCGTCTTCAGAGGGGTGGCGGTCAGGGCGCCAGTTCTGAAGATGGCATCTCTGTGCCCAACAGCGCTGCCGTCTTCCGAGCGTCCGAAACCAGCGCCTTCAGCAGGCCCGCCCTCTCCCACCAGAAGAGCCAGGCGGCGTCGTCGTCGTCGCCGGTCACCATCAAACCAAAGCCCCCAGCCAGGAGCTCCTCCCTCCCCAAGGTGAGCTCGGGGTACAGCAGCCCCACCGCCTCCGAGGCGTCCGCCAAAGACAGCCCGAGCCAGCACAGCGGCCGGCCGTCGCCCGGCTCCGACTCGCAGACCTCCCTGAGCGACCAGCCTCTCTTCAAGCTGAAGTACCCCAGCTCCCCCTACAGCGCTCACATCTCCAAATCTCCAAGGAACATGTCCCCCAGCTCAGGCCACCAGTCTCCCGCGGGAAGCGCACCCTCCCCGGCTCTCTCCTACTCCTCGGCGGGCTCCGCGCGGTCCAGCCCCGCCGACCACCCCGACCTCGACAAGCTGAAGATGGCGGCCATCGACGAGAAGGTGCAGGCCGTCCACAACCTGAAGATGTTCTGGCAGAGCACACCCCAGCACTCCACGGGACCAATGAAAATACTCCGGGGGGCCCCTGGAACCATGACTTCCAAGAGAGATGTCCTCAGCCTATTGAATTTGTCACCTCGGCACAACAAGAAGGAGGAGGGCGCAGACAAGCTGGAACTCAAGGAGCTGTCTTTGCAGAGACGTGGAGAAACCCCCCCCAAAGCCCCGCCCAACGGACACTGGCGCACGGAGACCACCTCGCTGAGCACGCTGCCGCTGCCCGCCCGCCCACCTGCCCCGGCTCCCACGCGCCCTCTCAGACTTCCTTCTGGAAACGGCTACAAGTTTCTGTCCCCTGGAAGATTTTTTCCTTCCTCTAAATGCTAAAGCATCTTCTGTGCCCACCGACAGCAGCCCGGAGCGCAGCGGCCCGGCCGGGCTCTCCGCACTCACTCGGCTGCCCTGCATGCGCCGCCCGCCCAGACGCCCCGCCCGCTGGTGGCCCCCGAGGACTCTGGGCAGATTCACCAAAAGCCAGGACTAATGTGGAGCTGGTACAGGATGCGCACGGAATTTTCTACACACATCACCAAATGTTTACCTGTGAGCTCCCTCTTCTCATCTTTGATGCGATTCAACAGGACTTTTGTACAAAAATGGTCAAGGTTCTGGGGCGGGGGAGGAGAGGGAGTACATATTTTGCGAAGAGGTATATATGCAGTACCTTTAGACACAGAATACGAGCTTTCGTAAGGCTTTCAGGTGCTGCTTGGGGGTGGGATGCGTAAAATCCAAGTTGAATTCTACATGAAAGTGTTATTATAAACTTGCCAAAAAACAGGATACCGGTTTTAAAAATGCCAATGATTTGTAATTAAATTGTAGCAATTCTGGTCTCACGGTACTGTAACATCATAGAACCGATGCAATAATTCACCTGGAAACAGTGCTTCCGTCCTGAACTCTGCTCTCCTGAGCTCTACAAATGTCCTTGGAACCCCATGGTCAACCAAACTTGAAAATTTTCGTAACTCCTATCCAGGCATTTTAGAACTATGCAATTGTGATTTAAAATGCAACTTTGTGCTTTTAAAACATTACTGACCTTTTTTGTACATGGATAAACAACTTGGTTTTGTTATCAATAGTACTTTGCATTTATAGCTATTATTTTTAAAAGCTCAAAAAGTTTTTTAAAACGTCAAATTTTGAATAGTCATCAATAAGTAATTATCAAATTTTTGGGGGGGGAGTTTGAAATTATTCAGTTTCCTTAGAAGAAAAAAATAGCAAAAAAAAAAAAAAAAAAAAATCTCATGGCTAACTAGATTTAACCAGAATCTAGCCTTCCAGCTCCTATCCCTTTACTTCCTGCTTAATTTTATCTTTTCCCAACTCCAGGCTTCAAACACCCCTCCTATCTACATCTGCTGCCAGGTTCCCACCGTCCCAGCACCTCCCACCTGTGAACTGCATGTGACCCCATCTTGGTGTGACCGGTGCCCCTGGTTCCTGTGATCTGAGGACAGACCCTTACTGTCCACGGCCTCAGAAGCACGGCCCTCTGCTGGGATATGTACCTCTGAGTTACTGCTCAACAAGGAGAGAGGGTCTTAAACGTGTTGTCACAGGGGAAAAAAAAAAGAAAAGAGGGACTCTTTCTCCAGCTATGATAGTTCCCTGATACTGCCGCCAGCCAGGATGAGACAAAAGAACAGTCTAGAAGGGGTAACCACTAACTTATTTTATAAGGAAAGGAAATGCTGAAAATCATGTTAGTGCCAAGTGCAGTTGGAGAACATAAGCCACTTTTAGGTAATTCTCAAGTGGAAATCCTACTTACTACCTCCTCACTGTGAAGGTCCATCCCACGAAGGCAGCAGCCTCTCGTCCCAGGACACCTGCCACGGGGAGAGGACAGCGGGGCCTGGCAGCAGCCTCATGACGACACCCGGGGGGGTTAACCTCGGGGAGGCCTCACTTGATTCACACACACTGACCACCTGTCTATTCCACACTGTACTCTGCAAAGAGGGAAAGATAATATATACTCGATAATATATACTCAATCTCTCTTACTCTCCTGAGCTGCGTCATAGAAACTTTTTGTGTTTAACCCAACAGCCATGTTGACAAAAGCAAGGATTCCCTCCCATCCTAACCCCGATCCCAACACTGGAAGAGAGGTACTTTATCAAGAAGCAAGCAACTATGAGGCTAGCTTTATGGCTTTTGTAAATGATAATAAAGTACCAATGTAGCAAATGAAAGCCAAGCTTATAAGCACTGTGCATTTAGATAGCAAAATCAGGTCCTCAATAACAAGAAACAAACCTCAAAAGTGAATTTCTGAATCCGCACGCATGTAGACAGTTAGGCTCGTCCTTTCTCAGCACCTCTCAGCCTCTTTCCCAAGTGCCAAGGAGCCCCGGAGGAAAGGCCGGTCTGTGCTCTGGCCCCGGGTGCCCACCTCCAGCACAGCCCCCTACCACCCGGACCGCTTCTCCTGGTTACCAAGCCAGCTGGGAGGACTCGTGGGCTCCGGCCCCGGGTGCCCACCTCCAGCACAGCCCCCTACCACCCAGACCGCTTCTCCTGGTTACCAAGCCAGCTGGGAGGACTCGTGGACCCTGACTTGGTTTTAGTCTAAGTACATTTGTTGTAGGTTTCATGTTCAAAAGCCAAATGGAATATATGATTTTTTTTTGGGTCCTGGATATAAGCTTCAGTGAAGGAAAGCAAAGATGATAAAATCAAGACCAATTGCCACTTCTTTCTGTTTACTGTCAGTCTTGGTGTTTTCTATTCAAGTGAAACGGATGTAAAATCCAAGTGAATTTTTTAGGCTTCCCTGAAAAAAGGATACACTTAAAAATTATGTGAGATTGTAAAATTTGCAGATTTCTTTGTACAGATCAGGGGTTGGCAAATGACCTCCAGGCTAAATCTGGTCAGAGGCCTGGATTTTTACAGCCAAGAGCTAGCAGTGGATTTTACATTTTAAAATATTTATATAAGTATCTACATAATATTGTGATATTTACCTCTTGGTCCACAGAGCCTCTTATGAAAACGTTTTGCTGACTCCTGGTCCACATGGCAGAAAACACACCCGGCTCATGTTCTGTTTCTAGGCTCGGAAAGCGGACGTCAGGCTGTGGACAGACAGGGTGTGTGGGAACCCGAGCCCTGTGGAGGGGAGGGACGGGCCCTGGAGGAGTCCTTGGCTCCCCGCCCCACGTGGAAGGGGTCGCTGGGTCACTGTATGCAGGCAGCATTGGACAGGACTTCTTTTTCAGCTCAGGAAACTGGAACCCCTGCCCCTGCTCCATCAGACGCAAATACGCAAGCAATAAAACCTCCCTCTCCTACAAACCCTGACAGTAGATCTTACTTCTCACCAGTGGGCCATGCAGGCAGCTCTGCACACTTCACTCATCTTAACAGAATCCATTTACCAAGACACAGCGAGCCACTCAAGCTTGCGTTCTGATGCGTTTGGTATTGGCGTGTAGAGAAACGAGAACGTTCTTGCCTCCACCCACTCGCAACAGTCCCCAGCCCATACGCCGCCGTACACGCGTCCGTATCTGCTCGGCTGCCCGGGGGAGGCCGGCAGGTGGTCGCCGCTGCGGGTGCCCAGCAGTCCCCGTCCCACACCCCAGCCACAAGGAGAACCGTCACTTCGCTAGTTTCAGTTCAGGCTGGGAAACCACCACCACACGATAATCGGGCTTGCTTTTAGTCAGTAGGCAGAATGTGAAAACTGTGTAATTTTCATCACATATTTTGTTCTTTTACCTAAAAGAACTTGTACCTGTGCTTTGTGAACTGGGCCCCCGTCTGTGCCAGGTCCTCCAGAGGGGCCGCGTGGAAGGACACACGTGGCCACGTCTCCCTGCGCACATGCCTTCCCCACGTGGCACTCATGCTCCTGTGTGCGGTGTTAGCCACCCTTGGCCTATGTGGACTTTTTTTTTTTGTAAATGACAGTTTCCAGATGGCATTAAACTTTTTATATTATGAAATTTACCATGTAAAAAGAACTTGGTATTTTTATTGAGATTGCTAAGGCACTTGGCCTTCCTTTGTGACTTCCGTGTCTATTAAAGCATGAGTTCCCTTGGTTTTAAGTGCCGTATCTGAGTCACTTTCTTTGCGTGTTCCACACTTTGTAGGTTTCTCTGCAGTACGCATGGGATCG EMBV3_33018 CTTACATGGACATAAAGTTGGAATGCTTTTCCTGGGTCTGGCAACCTCAAGGCAGGTGCC Gene BVT0102_109312 - 1 EMBV3_12878 GK000019.2:35876876-35933132 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00102424 TCONS_00162450 TCONS_00013240 TCONS_00013237 TCONS_00132043 TCONS_00243948 TCONS_00098275 TCONS_00098385 TCONS_00031871 TCONS_00154811 TCONS_00099834 TCONS_00162451 TCONS_00185628 TCONS_00105301 TCONS_00137852 TCONS_00178137 TCONS_00230483 TCONS_00029929 TCONS_00252175 TCONS_00243949 TCONS_00202431 TCONS_00000314 TCONS_00056222 TCONS_00207060 TCONS_00132257 TCONS_00240487 TCONS_00135546 TCONS_00010613 TCONS_00013239 TCONS_00169645 TCONS_00056481 TCONS_00154809 TCONS_00187309 TCONS_00164253 TCONS_00107398 TCONS_00039773 TCONS_00132044 TCONS_00117782 TCONS_00154810 TCONS_00013238 TCONS_00154253 TCONS_00102423 TCONS_00031828 TCONS_00202430 TCONS_00110376 TCONS_00252841 TCONS_00238548 TCONS_00140936 TCONS_00154812 39 XLOC_085141 XLOC_061863 XLOC_099332 XLOC_008038 XLOC_080693 XLOC_150314 XLOC_058521 XLOC_058631 XLOC_018116 XLOC_094549 XLOC_060077 XLOC_111681 XLOC_062534 XLOC_084061 XLOC_107910 XLOC_139973 XLOC_016184 XLOC_155116 XLOC_123974 XLOC_000088 XLOC_034025 XLOC_125579 XLOC_080738 XLOC_147151 XLOC_081769 XLOC_006164 XLOC_103408 XLOC_034284 XLOC_113357 XLOC_100173 XLOC_063308 XLOC_023590 XLOC_071948 XLOC_094013 XLOC_018073 XLOC_066280 XLOC_155782 XLOC_145215 XLOC_085365 Coding TCONS_00098385 XLOC_058631 NonCoding NonCoding - 19:5561093-5568721 - TSS72761 7628 6 TCONS_00098385_12 120 0.998820136339801 1 0 0.000472619384593992 0.000590112042379123 2.48698695252058e-05 6.19364967480683e-05 0.000262146668812916 8.23029148281041e-05 0.00017655106870438 0.000519719701354573 0.000316005689189621 0.00267620150743071 0.00246585130508771 0.00166543058682877 0.0010389308090448 0.001820917924053 0.00190811198114119 0.000274005677828412 4.6791762896366e-05 3.93696793448302e-05 0.000109342062985342 3.42928136903365e-05 7.04630609765089e-06 0.000202023784082533 0.000510413535597794 0.000290760511169636 0.000117659439792513 0.000218954540986896 0.000321718724345108 0.00197050180976411 0.00142749961532966 0.00144453398084447 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2349 88.75 0.234399580492921 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 9e-63 248 77.54 0.0431305715783954 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACTGGTCTATTGTATCATTTTAAGTTTGTGTTTTCTTGTTAATTTTCTGTTTAGTTGATCTATCCATAGGTGTGAGTAGGGTATTCAAGTCTTCCACTATTACTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATATTGCGGTGCTCCTGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGACCTTCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTTGTATGTGTCCCTTGTTTTGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCTTTGCCATTTACTTTATTGTTTTGGGTTCGAGTTTATACACCCTTTTTGTGTTTCCTGTCTAGAGAAGAGCCTTTAGCATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTAAAGCTTTTGACTTCTCCTTCATATTTGAATGAGATCTGTCATGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCGTGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGGAGAGAGAGAGAGTGAGAGAAAAGAGCGCACGCACGCGGGAGAGAGTCCGAGAGAAAGTGCTTTGGCTCCTCCTTTTATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAATGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTGTTCTACCTACCTAACATTCCCCCCTCAAGAGATGGGAGGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGGTGGCAAGGGATATTGGGCCTCCCCCTCTTTCTAGTCTCAAGCCTCAGAGTCCTTATAGCGGTGTCCAAGTGTGTGTGATATTTTCTGTGGTCAGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTAGTTGACCTGGGCAGAGACAAAACAAGTTAGACAATTGACAGTACATGGAATAATCATAAGCATCATCAATATAGCATAACAAGGACTAGTAGGGACATTCGTCAATTTTAAATTCACATTGCCAGGATAGCTCAAGTCCCTCCTTATTCAGGAATCAGAAGATCTATCTCCTGTCTGTCTTGGAGTACAGTCTCTGTCAAGCTGTGTTGGCTCCTTAGAGTTATCCTGAGAAATCTTATCCCCAGAAACCAGGTTTTGGGGGTGTTCATTAGAATGACATTCATTGGTAGTTCTGAATAGGTATCTGAGATCTCCCAGGGGCTCACAGGTGTATTGAGTGTCCTCTTCTGTTTTTTTCCATGGCTTGACTCGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCAGTAGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAGTTGAGCCTTTGGGGACCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCCTGGAGCATATAGTGGTGACTCTTTAGAATCTTTTGGGTCCTTGTTCATACCCCACAAGCGTATATCCTGTTGGAATTGCCCAATGGCCATGGTATAAGACTGGAGGGTCTGAATCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTCATAAGGACTAAGACCAATCTGTTCCTTAGGGGCAATGCGGGTGCAGAAGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATTGCTGATTTTAAGAATTGATTGGCTTTATACTTTTCCTGAAGATTGAGGCCTCCATGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACTCCTCGGGTGACCTTAGAAGTAAATGATGTCCCATTGTCATTTTGTAATGACCTGGGCAGCCTTAGCCTTCTCGGTCCGGGTGGGAAAGCCTTCAATCCATCCTGTGAATGTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGTATCTGGGTGAAGTTCATCTGCAAGTCCTCTCCTGGGTAGGCCCCACGTCGTTGGACGGGCTGGGCCAGCTGGGGTCTTCGAGCTCCTTGGGGGTTGTTTAATTGGCAAGTGCGACAAGAGGAGACAACCTGTCTTATAGTTGTTTGGAGGCCTGTTCCTCTGAAGGACCTTTCTAGTCATCTTTGGAGGGCTTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTTCAGGCAGAAAAAGGAGTCCCTCCTTTTGGAACCACCCCATATGATCTTCTCGAAAGCCCTCGCTGTTAGCTTTAAGAGTCTCACCTTCAGTATATGAAGGAGTTTCTGGCAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGCTGCTTGGTTCCCTCGTGCCACTTCCATGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGCAGATGGGCTGCCTCCAAGAGTCGAAGAATCTGATCACCATATTTGATTGGGGACCCTCGGGTGGTCAAGTGACCCCTTTCTTTCCAAACAGCCGCATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCATACCTGGCTCTTCTTTTTCCATCCAAGACAAAGCTGCTTCCATCAGTGTACCAGATTTCCTCAGGATTGGTCAGAGAATCTTCTGACAATCCCTCTTGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAAGAGTGAAATGGAAGAGAGCCCTCGGGGGTAGGGAGGAGGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGGATTTTCCATCAGCATTACATGATATCTGAGGGTTCTTTGATCAGACATCCATAAATGGCCTCTCCCATTTAGAAGTTGTTTTACTTGGTGGCTGGTAAAAATAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCTAAGGCAGGGGGGCCAACCTTGGGAAGTTGGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATCCCACTCCCAAGGTTATTCCCTCTCTTCCATGGACATAAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGAAGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCTTCTGCCTCCTTTTGAGGATTTCCCCACATCAGTGGGATTGAATCATCTTGTCCCTTTAAGCTTTCATATAAGGGCTGGGCAATTAGACCATAGTTGGGTATCCAGATTCTACAGTAACCAGTTAGCCCCAGGAAAGCTCGCAATTGTTTTCGAGTTGTGGGGGAGGGCAACTGGAGAATTCCTTGTACCCCATCAGAGGACAGCCTCCTGGACCCGTGTGTAATCTGAATTCCCAGGTAAGTGACCTTTGTCTCGACCATCTGTGCCTTAGTATGGGAGACTTTATATCCCCTTTCTGCCAAGAAGTTTAGAACCTGAATTACATGTTGTTGGGCGCTTTTCTCATCTGGAGAGCAGATTAGTAGGTCATCTACGTATTGTAATATTTTCCCATTAGGTCCCAGGTCCAGATCTAGGAAATCCCAGCTAAGGGCCTGTCCAAACAGGTGGGGGCTATCTCTGAACCCCTGAGGTAATACTGTCCAAGTCATCTGTTGGTGTTTTTCTCCTGGGGCCTCCCATTCAAAGGCAAAATGTTATTGGGATTCTTTAGCCAGTGGTATGCAAAAAATGCATCTTTGAGATCCAAGACAGTAAACCATTTGGCACTGGGTGGGATTTCTCCCAAGATTACATAGGGATTGGGTACTGTGGGATGGAGGGGGACTACAGCTTCATTTATAATCCGGAGATCTTGAACCATTCGCCAGGTTCCGTCTTTTTTCTTTACTGAGAGGATTGGGGTGTTACATGGTGAACTGGTAGGGACCAATAGCGCACAAGTAAGGACTTTATTTATTAAAGGCTGTAGTCCCTCCAGAGCCTCTCTTTTGAGAGGGTATTGTTTCCGGTTAGGAAACCGAGTGGGATCTCGGAGGACAATGATGACCGGTTCAGCTTGGTGGGCTCGCCCAGGAATCCCCTGGTCCCACACCTGGGGGTTAATTTTGTCTTCCCATAGTTTTTGGTCCCTCTCTATTGAAGGTGTAATGGGTTCTTCAGTAGTAACCAGGAGCTGTAGAGCTCTAGGGGCTGAAAAAGTTCCCATCACAAGGGTGGTACCCAGTTTAGTGAGTATATCTCTTCCCAATAAGGGGATAGGACACTCAGGGACCACCAGAAACTGGTGGGAAAATATTTATCCATCCCAGCAACAAAGAAGTGCTTGGGTGAATCTTTTAGTAGTTGCTTTTCCTGTAGAACCCAAAATGGTACAGGTTTGGGAGGAGAAGGCTCCGGAGTAGGAGATCAAGACAGAGTAGGTAGCCCCTGTGTCAGCCAAGAAATTCTCGGACCTACCTGCCACATCCAGTTGCACCCTTGGCTCCAGCCCCGTGATGGTCATCTGTGACAGGCGGGCTGGCTGGAGTAGGCCGCTTCAGTCCTCTTGAACCATAGTGAGGGAAGGCTTGGCACTTGACCTTGAGGCTCTTGGGTCCCGAGGGCAGAGTGCCACCTAATGTCCCAGTTGATGGCATTTGTGGCAAGCTGTTCTAGGAGACTTGTCACGGTTTGGACACTCTTTGGCCCAATGCCCCACCTGTCTACAGATCAGGCATCTATCTCGTGCCTTGTCTCTCAAGGACTCAGGGTTTGCCATAGGGCTTCTCTGGAGGGCGGCCAGCATCTGGGCATGCCTTGTCTCTTTCTTTCTCTCCTTCTCCTGGGCCTTGGCCTCCTTCTCCTGTTCCCTGTTATAAAAGGTATTGGTGGCTGTCTGGACCATCTCATCTAAAGAGGCAGCAGGGTCCTGCTGTTGTAGTTGCTGTAACTTAATTCTGATATTTGATGCACATTGGGACAGGAATTTGTCCTTTAAAATCACCCGTCCCTCTTAAGAGTCTAAGTCCAGGTTGGTAAACTTTTGGATGGCCTCTTTTAGCCTCTCCAGAAAGGCAATGGGGTTCTCACTGGGCTCCTGAGTTATTGCTGAGACTGGGCACAGTCCCACAAGTAGTAGGCTTTTTTTATGTTTCCATGGGTGGACTTCCTTAGGGAAGTCTTTCTAAAGCTTATCCTACCCAGAATGGTTGCAACCTGAGAGCCAGGCGTCCCTGGGTCAGGGTGCAGATCCCCAGGCAGGCTGAGGCATGACAGCCTCCTAGAGATCCAATCCCCGGGCAGGTTGAGGCGTGACGGCCTCCTGAGAATTGGGTCTCTGGGCAGGTTGAGGCGTGACAACCTCCTGGGACCCCTGGACTAGAGGATCCCCGAGCAGGTTGAGGCGTGACAACCTCTCAAAGACTGATCCCTAGGCAGGTCAAGGCGTGATGACCTCCTGGGACCCCCCGGACTGGAGTTTGGGCGTCCCCAAGATCTCCAGTGTGACCAATATTGGGTAGGATTAGGGGTTGGATATTATAGAGTATTTCCCTCCCAAGGCATGAAACAGGAGGGAAGGGGGCAGAGCACAAACTTTGAAAGAATGACATAAACCAATTAAAATCAATTGAGTCCAAGATGACAAGTCAACTTCAAGTAAACCTTAATCCCCAATCTATAAGCCAACAGACACACCCAGAGGTGGCAGGACAGCTCCAAGGCACAAGATCAGAAGAGGGAGAAGTGGGTGGTTCCCCAATGGCTGGGATGATCCTCTCACTCATTAGCATATGAATTCCATCCCCTCACAAAACCTAGCCAGGCCTAATACCATGGCCGCAGCCCTTGCCCTCAGCAATGGTTCACACCCTGAAGAGTGGCTTCTCTCTGGATCCTAACAAATCTACCTCTTATCGCTTTGTCTCTCAATGAATTTTTGCAATGAGACACCAGAGCCTGAATTTCACTAGTTTTGGCCGGGCTTGAGTCCCGGGAGAGAGCTGAAGGACAGGAGGAAAAAGCAGTGGGAAAAACATGCCAAGGAATCCCCTTCATAGCCCGCTGGAAAATTTGCTGAATATCTGACCGGTACTCACAGTTTCATTGGTCTAATCTTTGGCACAGAGAAGAGAAAGGACAGAAGAACCCCACCGGCTTGTGTAACAGCTACTGAGGCTCAGTAGATAGCGCCTTTGGGACATGCTGAGGAGCAGCCTCTCCCGAGTCCCTCAATTGTGCCCCTGCCGCCTGCCTGTTCGCAGGAGGTTCGAGGAAACAAGAAATGAGAGATTGTAAAGGTCCCTCCAGCCATAGGAGCGAGGACCTCTTACCTTAACCGGAGGTCTTCTGGAATCTGAGACTGGGCCACGTGAGCTTTCTGCTGAGTTCGTTTTTCGCTGTCCCGGTTTCCAGCACGATGGGCCTTCCCCTGCTCTGGGTTTCTTCGTCTTCTGCTTCTAGCGCGGGAACTTCGCTGAGTTGGGCTCCTGCTGTGCTTGGCCTCTTCCGCGAGGAGGTTGTTTCAGCCAGGTTAAATCCGAGTCACGGCACCATAGATGTCACGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCATGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAGAGGGAGAGAGAGAGAGAAAGAAAAGAGTGCACGCACGCGGGAGAGAGAGTCGAGAGAAAGCGCTTTGGCTCCTCCTTTTATATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTCAGCCAGGAGTGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCACCATTTTGGACTTCTTTCCCCTATTCTACCTACCTAACAGATCCTTGCTGGGTACAGTAGTCGGGGCTGTAGGTTATTTTCTTTCATCACTTCAAGTATGTCCTGCCATTCCCTCCTGGCCTGAAGAGTTTCTATTAAAAGATCAGCTGTTATCCTTATGG TCONS_00092057 . 3' 38382 TCONS_00092057 . 3' 46009 EMBV3_07676 GAGACTTACTAACAGTTTTTGGAGGGGGCATAGAGATCGGAGAGCCTACAGCTGAGTCAC Gene GeneID:540085|GAB1:NM_001101201:50_cdna UTR3_Alt 2 NULL GeneID:540085 17 GENE GAB1 NULL GRB2-associated binding protein 1 EMBV3_30609 TCAGGCAGGAGGCCAACACCCACATCACGGCCTTCAACACCACCAAGATTGTCAGCACTT Gene GeneID:617727|ARRDC5:NM_001128508:69_cdna Constitutive 0 NULL GeneID:617727 7 GENE ARRDC5 NULL arrestin domain containing 5 EMBV3_13208 AGTGGGAACCCTCTCTGGAATGGTCTGTCCCCTTATTGTGGGTGCAATGACCAAGCACAA Gene GeneID:529659|SLC17A8:XM_002687527:489_cdna Constitutive 0 NULL GeneID:529659 5 GENE SLC17A8 NULL solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 EMBV3_25943 GCAGCATTCTGAACTACCTGAAGCTCATCAAGAAGAGGGCGTCCGGAGAATTAATGACAG Gene GeneID:512468|GCLC:NM_001083674:113_cdna Constitutive 0 NULL GeneID:512468 23 GENE GCLC NULL glutamate-cysteine ligase, catalytic subunit EMBV3_06748 AAAGGGACCCTCAGACTGTAAAGGAGAGGGTTGCCTGAGAGCTTAGAGGACGTGGCTATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06099 ATGCCCGAGGACCAGGCCGGCGCAGCCATGGTCTCCTGAATGATGCAACTGTAGGTATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03840 GAAGATCCCGACGCTGGTGGAAGAGCTGATTGCAGTGGAGATGTGGAAGCAGAAGGTGTT Gene GeneID:528799|ZMYND10:NM_001040548:220_cdna Constitutive 0 NULL GeneID:528799 22 GENE ZMYND10 MGC134474 zinc finger, MYND-type containing 10 EMBV3_30065 GTAGTACCTCCCAGTCATGGGGTAACTTGCTAGAAGGGTTCACGGCTATAACATGGCACA Gene BVV0102_150714 + 1 EMBV3_15003 GK000012.2:2695363-3435968 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33158 CAACCTACTAATAACTGACTGGCTGGGGAGTCTGGGGAAGTGATACAGAGGTTTGATGGG Gene GeneID:782397|EIF4EBP2:XM_002698867:463_cdna Constitutive 0 NULL GeneID:782397 28 GENE EIF4EBP2 NULL eukaryotic translation initiation factor 4E binding protein 2 EMBV3_39705 CTGTGAGTCGGAGAAGAAGTTCAAGGAGTCTGAAGCCCCCAAAACCCACCACCAGCAATT Gene GeneID:613918|TMEM28:XM_002700034:136_cdna Constitutive 0 NULL GeneID:613918 X GENE TMEM28 NULL similar to transmembrane protein 28 EMBV3_15074 TCCCGTCGATGTTATTCCATTTCCTGGCCAAACGCAACATTCCCGGCGAGAGCTACACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22177 TCCAACATGGAAGGCGACAAGATGTCAATCACCAGGGCAACTGGGTCCTCTGCTGTAATC Gene GeneID:100295719|LOC100295719:XM_002686921:166_cdna Constitutive 0 NULL GeneID:100295719 4 GENE LOC100295719 NULL hypothetical protein LOC100295719 EMBV3_04207 ATGTGGATCCGCTTGGCCCTCAAATAGAAACTCTGATGGATGAAGAGCAACTGGGGCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09442 GCTTCGACAAGCGGACAGATGCAAATCAAACTGAAAGCCAGTCAGAGACAGTCCTCCAAC Gene GeneID:100296398|LOC100296398:XM_002696376:89_cdna Constitutive 0 NULL GeneID:100296398 20 GENE LOC100296398 NULL similar to RAN binding protein 3 EMBV3_42991 AAACTGGATGATGATTCAGTCATAGAAGGAAAATGCACATCAAAATATTCACCCAGAAAA Variant GeneID:617379|RNF170:XM_002698710:124_cdna 125^198 1 EMBV3_00940 GeneID:617379 27 GENE RNF170 NULL ring finger protein 170 EMBV3_34086 CAGGCTCGAGTTGGACCCCTGATACACGATGTGAAGATCTCCTCAGCCACTTCTCAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15663 CTCTTACCTTGATGGTTTGCATGCCCTCTTTGCCACAGACCTAAACTTAGTAACTTGGCC Gene BVV0101_048766 + 0 NULL GK000003.2:32532415-32598405 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169478 TCONS_00169479 TCONS_00169477 TCONS_00172905 2 XLOC_103372 XLOC_104243 Coding TCONS_00169477 XLOC_103372 NonCoding NonCoding - 3:32539407-32548070 - TSS126885 8663 4 TCONS_00169477_10 104 0.969756435414983 1 0 4.88295253217216e-06 6.60403005560588e-09 6.23822360019892e-09 5.5032472691182e-09 3.48289034413361e-09 1.89148308724251e-07 3.85731073272981e-09 3.21673022498803e-06 5.08019572770473e-09 0.000286757391384622 0.000242506138094562 0.000290078093236615 0.000118113580484577 3.15575295651719e-05 7.16434991852175e-05 0.000286769461521243 5.16970724825997e-05 1.02612038341872e-08 1.25681517371072e-06 2.31057155193295e-06 1.96328928644387e-09 9.7597238258834e-05 0.000276049091213735 1.41737247540158e-05 4.58448671894727e-09 3.00819435858884e-06 3.75997520757444e-09 0.000279084349338547 0.000231700673443948 0.000129566508943314 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2439 89.79 0.209049982684982 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 2e-09 71.6 70.06 0.0180076186078726 0 noncoding 0 0 0 0 -0.5722063257355 0.096289434855765 0.344670479128188 0.00359310630934064 ACTTGGGAGGCAAAAGCAAAGCAGTAGCCACTTTATTGCTCACACAGCTTGTCTGATCTACTGACACATATCTTTGTCATGAGGTGTGGCCAGATCTGGAACTACTTCATCTTCCCTGTATCTTTCTTCAGCTTTCTTACTTATTGGCCAAGTTACTAAGTTTAGGTCTGTGACAAAGAGGGCATGCAAACCATCAAGGTAAGAGACAATAGGAATTGACACAAATTTCAATCTGTCCTGTGGCCCTCAGCTTGTCCTTGTGTGTTCCGACTTGTTCTTCCTCTCCCTCAGAATTTCTTGCTGATTTCCTGCCTTGTGGACTTGAAGTTTCACCATCAGATAGGGAGACAATAGCTCTTCACAAGGAGGCAAGAAGATTAGATTCCTAGAATGAATCCTTTTGCACATACACAGACATACATATTCCACATTGTGGTTCTGCTTCTCTGATTGAATTCTGACTTATACATTACCCTGAATTTATTTTAAAATTCTCCAACAATTTCTGTGAAGAGTTTAGAATTTTTTTCCTTTCAAAGACTGTTCTTTAACTTGCTTCATATTGGTTTTCATATATGTACAGTGTGAATGAGTTCAATTCGATTTCTTTCCAAATGATTAACCCATTGTTTCAAGATTCTTAATTGAAAAGTCCATCTTTTCACTTTTGATAGGTATGTCACACGAGTGTATGTTCCTTGGTTCTTTGTCTCATCACAACAAAGATTTGGAGCGACGGACATTAAAGTCCTCAGTGCGTCACAGCTCTCGGGTCTTGGACAAACCGTGCTACAGCTCTTAGGCAAATCAGTGTTACAGCTCCATTTTATTTAGAAGATAGCAGGGGAATCCAAGACTCGAAGAGAAGAGAGTGGAGGAATGCGTGGGGAGTGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGCGCGCACACACACACGGAAGAGAGAGAGAGAGAGCGCATGCGTACGCGGGGGGGGGGGGGTGGGGGGCGGAGAGAGAGAGAGACAGTCTGTGAGAAAGCGCTTTGGCTCCTCCTTTTATATGTTTTTTCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAGTGCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTCGGACCTTCTTTGACCTTCCTTGTCTTCTAGTCACCGCCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACATTTCCCCAAGAGATGGGAGGCCCAATTCTTTGAGAATACGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGAGCGGTGAGGGGTATTGGGCCTCCCCCTCTTGCTAGTCTCAACCCCCAGAGTCCTTATAGCGGTGTCCAAGGGTGTGTGATATTTTCCGTGGTCAGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTGGTTGATCTGGGCAGAGACAAAACAGGTTAGACAATTGACAGTACATGGAATAATCATAGGCATCATCAATATAGCATAATGAGGACTAGTAGGGACATTGGTCAATTTTAAATCCACATCGCCAGGATAGCTCAAGTCCCTCCTTGTTCAGGGATCAGAAGATCTATCTCCTGTCCGTTTTGGAGTACAGTCTCTGTCAAGCTGTGTTGGGAGTTATCCTGAGAAATCTTATCAACAGAAACCAGATTTTGGGGGTGTTCATTAGAATGGCACTCATTGGTAGTTCTGAATAGGTATCTGAGATCTCCCAGGGGCTCACAGGTGTATTGAGTGTACTCTTCTGTTTTCTTCCATGGCTTGACTCGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCTGTGGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAATTGAGCCTTTGGGGACCCATCTTTCCAGACTTTAATTAGGACTTGAGTCCCTGGAGCATATAGTGGTGACTCTTTAGAATCTTTTGGGTCCTGGTTCATACCCCACAAGCGTATATCCTGTTGGAACTGCCCCATGGCCATGATATAAGACTGGAAGGTCTGAACCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTGATAAGGACTAAGACCAACCTGTTCCTTAGGGGCAATGCAGGTGCGGAGGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATCGCTGATTTTAAGAACTGATTGGCTCTTTCTACTTTTCCTGAAGATTGAGGCCTCCAGGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACCCCTTGGGTGACCTTAGAAGTAAATGATGTCCCATTGTCACTTGTAATGACCTGGGCAGACCAAATCTTGGAATGATTTCATGGAGCAGTTTTTTAACTACCTCCTCAGCCTTCTCGGTCCAGGTGGGAAAGCCTTCAATCCATCCTGTGAATGTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGCATCTGGGTGAAGTCGATCTGGCCAGTCCTCTCCTGGGTAGGCCCCACGTTGTTGGATGGGCTGGGCCAGCTGGGGTCTTTGAGCTTCTTGAGGGTTGTTTAATTGGCAAGTGGGACAAGAGGAGACCACCTGTCTTATAGTTGTTTGGAGGCCTATTCCTCTGAAGGACCTTTCTAGTAATCTTTGGAGGGCCTTTTCTCCTAAATGAGTAGTGGCATGCAAGGAGTTAACCAACTTCCATTGGAGGTTTCCAGGCAGAAAAAGGAGTCCCTTTTTTTGGAACCACCCCATATGATCTTCTTGAAAGCCCTCGCTCTTAGCTTTAAGAGTCTCACCTCCCACCTCCAGTATATGAAGGAGTTTTTGGAAAATTAGTCTGTGAAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGCTGCTTGGTTCCCTCATGCCACTTCCGTGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGCAGATGGACTGCCTCCAAGAGTCGAAGAATCTGATCACCATATTTGATTGGGGACCCTCGGGTGGTCAAGTGGTCCCTTTCTTTCCAAATAGCTGCATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGACTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTACAGTCTCAAAACTGGAGACTACTGCATACCCGGCTCTTCTTTTTCCATCCAAGACAAAGCTGCTTCCATCAGTGTACTAGATTTCCTCAGGATTGGTCAGAGGATCTTCTGACAATCCCTCTTGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAAGAATGAAATGGGAGAGAGCCCTCAAGGGTAGGTAGGAGGGTGGCTGGGTTAAAAACCTCACAAGGGGATATAGTGAGGCCTGGATTTTCCATCAGCATTACTTGATATCTGAGGATTCTTTGATCAGACATCCATAAATGGCCTCTCCCATTTAGGAGTTGTTTTACTTGGTGGCTGGTAAAAATAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCAAAGGCAGGGGGGCCAACCTCGGGAAGTTGGATTGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATCCCAACCTTTGAGTTAACACTCCCAAGGCTATTCCCTCTCTTTCATGGACATAAAGTTGGGATGCTTTTCTGGGTCTGGCAACCTCAAGGCTGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCCTCTGCCTCCTTTTGAGGAGTTCCCCACATCAGTGGGATTGAATCATCTCGTCCCTTTAAGCTTTCATATAAGGGCTGGGCAATTAGACCATAGTTGGGTATCCAGATTCTACAATAACCAGTTTGCCCCAGGAAAGCTCACAATTGTTTTCGAGTCGTGGGGGAGGGCAACTGGAGGATTCCTTGTACCCGATCAGAGGACAGCCTCCTGGACCTGTGTGTAATCTGAACTCCCAGGTAAGTGACCTTTGTCTCGACCATCTGTGCCTTAGTACGGGAGACTTTATATCCCCTTTCTGCCAAGAAGTTTAGAACCTGAATTGCATGTTGTTGGGCACTTTTCTCATCTGGAGAGCAGACTAGTAGGTCATCTACGTATTGTAATATTTTCCCATTAGGTCCCGGGTCCAGATCTATGAGATCCCGGCTAAGGGCCTGTCCAAACAGGTGGGGGCTATCTCCGAACCCCTGAGGTAATACTGTCCAAGTCATCTGTTGGTGTTTTTCTCCTGGGGCCTCCCACTCAAAGGCAAAAAGGTATTGGGATTCTTTAGCCAGTGGTATGCAAAAAAAAAAAAATGCATCTTTGAGATCCAAGACTGAAAACCACTTGGCACTGGGTGGGATTTCTCCCAAGATTACATAGGGATTGGGTACTGTGGGATGGAGGGGAACTACAGCTTCATTTATAATCCGGAGATCTTGAACCATTTGCCAGGTTCCGTCTTTTTTTTGTTTACTGAGAGGATTGGGGTGTTACATGGCGAACTGGTAGGGATCAATAGCCCGCAAGCAAGGAATTTATTTATTAAAGGCTATAGTCCCTCCCGAGCCTCTCTTTTGAGAGGATATTGTTTCCGGTTAGGAAAGCGAGTGGGATCTCGGAGGACAATGATGACCGGTTCAGCTTGGTGGGCTCGTCCAGGAATCCCCTGGTCCCACACCTGGGGGTTAATTTTGTCTTCCCATAGTTTTTGATCCCTCTCTATTGAAGGTGTAATGGGTTCTTCAGTAGTAACCAGGAGCTGTAGAGCTCTAGGGGCTGAAAAACTTCCCATCACAAGGTTGGTCCCCAGTTTAGTGAGTATATTTCTTCCCAATAAGGGGGTAGGACACTCAGGGACCACCAGAAACTGGTGGGAAAATATTTGTCGATCCCAGCAACAAAGAAGTGCTCGGGTGAATCTTTTAGTAGTTGCTTTTCCTGTAGTACCCAAAATGGTACAGGTTTGGGAGGAGAAGGCTCCGGAGTAGGAGATCAAGACAGAGTAGGTAGCCCCTGTGTCAACCAAGAAATTCTCAGACCTACCTGCCACATCCAGTTGCACCCTTGGCTCCAGCCCCATGATGGTTATCTGTGACAGGCGGGCTGGCTGGAGTGGGCTGCTTCAGTCCTCTTGAACCATTATGAGGGTAGGCTTGGCACTTGACCTTGAGGCTCTTGGGTCCCCAGGGCAGAGTGCCGCCCAATGTCCCAGTTGATGGCATTTGTGGCAAGCCATTCTAGGAGACTTGTTTGGACGGTTTGGACACTCTTTGGCCCAATGCCCCGCCTGTCTAGAGATCAGGCATCTGTCTCATGCCTTGTCCCTCAAGGACTCAGGGTTTGCCATAGGGCTTCTCTGGAGGGCAGCCAGCATTTGGGCATGCCTTGTCTCTTTCTTTCTCTCCTCCTGGGCCTTGGCCTCCTTCTCCTGTTCTCTGTTATAAAAGGTATTGGTGGCTGTCTGGACCATCTCATCTAAAGAGGCAGCAGCGTCCTGCTGTTGTAGCTGCTGTAACTTAATTCTGATATCTGATGCACATTGGGACAGGAATTTGTCCTTTAAAATCACCCATCCCTCATAAGAGTCTAAGTCCAGGTTGGTAAACTTTTGGAGTGCCTCTTTTAGCCTCTCCAGAAAGGCAATGGGGTTCTCATTGGGCTCCTGAGTTATTGCTGAGACTGGGCACAGTCCCACAAGTAATAGGCTTCTTTATGTTTCCATGGGTGGGCTTCCTTAGGGGTGAGTCTTTCTAAAGCTTATCCTACCCAGAACTGTTGCAACCTGAGAGCCAGGCGTCCCTGGGTCATGGTGCAGATCCCCAGGCAGGCTGAGGCATGACAGCCTCCTAGAGATCGAATCCCCAGGCAGGTCGAGGTGTGATGGCCTCCCGAGGATTGGGTCCCTGGGCAGGTCGAGGTGTGACGACCTCCTGGGACCCCTGGGACTAGAGGATCCCCGAACAGGTTGAGGTGTGACAACCTTTCGAAGATCGACCCCTAGGCAGGTCAAGGCGTGATGACCTCCTGGGACCCCCCAGACTGGAGTTTGGGCATCCCCAAGATGTCCAGTGTGACCAGTGCTGGGTAGAATTAAGAGATTTGTAACTCATTGCTAGTTTGCCCACCGTGGACAGGAATAGATACAAGTTCATCTTACCCAGAACTGTTGCAACCTGAGAGCCAGGCGTCCCCGGGTCAGGGTGCAGATCCCCAGGCACGCTGAGGCGTGATGGCCTCCCGAGGATTGGGTCCCTGGGCAGGTCGAGGTGTGATGACCTCCTGGGACCCCTGGGACTAAAGGATCCCCGAACAGGTTGAGGCGTGACAACCTTTCGAAGACCAATCCCTAGGCAGGTCAAGGTGTGATGACCTCCTGGGACACCCCGGACTGGAGTTTGGGCGTCCCCAAGATCTCCAGTGTGACCAGTATTGGGTAGGATTAGGCGGTTGGATATTATAAAGTATTTTCCTCACAAGGCCAACTATTTTCTGGTTGTCTCTCCAGAAGATTGTAGAGACAACCTTGTGGGTCTGGATGGGGCTCAGGAAAAGAGCATGAAACAGGAGGGAAGGGGGCAGAGCACAAACTTTGAAAGAGTGACATAGCACAAGGGTATAATGTAAACCAATTAAAATCAATTGGGTCCAAGATGACAAGTCAACTTCAAGTAAACCTTAATCCCCAATCTATAAGCCAACAGACACACCCAGAGGTGGCAGGACAGCTCCAAGGCACAAAGTAAAAGAGGGAGGAGTGGGTGGTTCCCCAATGGCTGGGATGATCCTCTCACTCATTAGCATATGAATTCCATCCCTTCACAAAACCTAGCCAGGCCTAACTACATGGCCTCAGCCCTTGCCCTCGGCAACAGTTCACACCCTGAAGGGTGGCTTCTCTCTGGATCCTAATAAATCTACCTCTTATCGCTTTGTATCTCAAATAATTTTTGCAATGAGACATCAGAGCCTGAGTTTCATTAGTTTTGGCCTGGCTTGAGTCCCGGGAGAGGGCTGAAGGACAGGAGGAAAAAGCAGTGGGAAAAACGTGCCAAGGAATCCCCTTCATAGCCCACCGGAAAATTTGCTAAATATATGACGGGTACTCACAATTTCATTGGTCTGATCTTCGGCGCAGAGAAGATAAAGGACAGAAGAACCCCCACCGGCTTGTGTAACAGCTACTGGGGCTCAGCAGATAGCGCCTTTGAGACATACTGAGGAGTAGCCTCTCCAGAGTCCCTAATTGTGCCCCCTGCCGCCTGTCTGTTCGCAGGAGGTTCGAGGAAACAAGAAACAGGAGATTGTAAACGTCCCTCCAGCTATAGGAGCAAGGACCACTTACCTTAACCTGAGGTCTTCTGGAATCTGAGACTGGGCCGCGTGAGCTTTCTGCTGAGTTCGTTTTTCGCTGTCCAGGTTTCCAGCATGATGGGCCTTCCCCTGCGCTGGGTTTCTTTGCCTTCCGCTTCTAGCGCGGGAGCTTTGCTGAGTTGGGCTCCTGTTGTGCTTGGCCTCTTCCATGCAGAGATTGTTTCAGCCAGGTTATATCCAAGTCACGGCACCATAGATGTCACGTGTGTGTATGTTCCTCGGTTCTTTGTCTCATCACAACAAAGATTTGGAGCGACGGACATTAAAGTCCTCGACGCGTCACAGCTCTCGGGTCTAGGACAAACCGTGCTACAGCTCTTAGGCAAATCAGTGTTACAGCTCCATTTTATTTAGAAGATAGCAGGAGAATCCAAGACTCGAAGAGAAGAGAGTGGAGAGTGGAAAGCGCTTTGGCTCCTCCTTTTATATGTTTTTTCCTCTACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAGTGCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTCAGACCTTCTTTGACCTTCCTTGTCTTCTAGTCACTGCCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAATAGGTAATATCAAGTTTATCATATAGCACGTGTCCATACATGTATGGGTTTGTTTTCTGGTCTTTCTCTTAGTGTATCTATGTATATATATTAGTATAGCTGTACCTAACTTAAGTTAAGGGATATCTATAACTCAGTGAATACTTGTGTCTTAATTACAGTAGCTCTAATATATATATCTTGGCATGTACCCTATCTTACTTTTCTTGATCCAGCATATCTTAGTGTTTTTATCCTTAGCATTTTTATATAAATTTTAGGAATAACTTCTCAAATTCCATAATGTAGTCTGTTGGTATGTATTCAGGTTGGATTATATCAATAGATTAAATTGGAGATAATCAACATGTATTATCTTGTATAATGTTAACAGATACAATCTCTAAGCATGGTGCATTTCTCTATTTAAGTTTTCTATAATGCTTTTCAACTGAGTTTTAAAATATTCTCCAAGAACCTCTTGCATAACTTTTTAGAAATTTATTTCTAGATACTTATATTTTTTCTCTATTAAAAATGATAATTAAATTTTTGATGGAAAATAT TCONS_00169469 TCONS_00169470 TCONS_00169474 TCONS_00169476 TCONS_00169468 TCONS_00169471 TCONS_00169472 TCONS_00169473 TCONS_00169475 s 3' 8123 TCONS_00169469 TCONS_00169470 TCONS_00169474 TCONS_00169476 TCONS_00169468 TCONS_00169471 TCONS_00169472 TCONS_00169473 TCONS_00169475 s 3' 8123 EMBV3_08381 AGGCATTTGCTCCCACTGTTTTCAGCACTCTGGCCTCCTGCCCCGATCTCATTGCATCTA Gene BVT0102_140337 - 0 NULL GK000011.2:73288805-73292030 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01397 TCTTCCAGCTACATAGGGTTCTGTGTCTACTCGGGAGTCCTTGGATTTGCTTTTGGGTGG Gene GeneID:509911|LOC509911:XM_002686176:345_cdna Constitutive 0 NULL GeneID:509911 3 GENE LOC509911 NULL similar to solute carrier family 16, member 1 (monocarboxylic acid transporter 1) EMBV3_14926 CTTTAGCTCAACCGCCCGGAACCGCTTCGAGAACCGAGTAGCTGAGAAACAGAAACTCTT Gene GeneID:338086|COX7A1:NM_176674:529_cdna Constitutive 0 NULL GeneID:338086 18 GENE COX7A1 NULL cytochrome c oxidase subunit VIIa polypeptide 1 (muscle) EMBV3_18407 ATCCTCAGTGCTGGGAATCTTCTTCAGTGCTCCTCCTGGAAATGTGGAAGCCTCGAATCT Gene GeneID:100139318|LOC100139318:XM_002685536:118_cdna Constitutive 0 NULL GeneID:100139318 2 GENE LOC100139318 NULL similar to hCG1657980 EMBV3_06494 TCAGTGTCGGAACCAAAGTGAAGCTGCTAAATGCTAAGGAGATTCCAGCGCTCCGATACC Gene GeneID:617569|LOC617569:XM_002685005:129_cdna Constitutive 0 NULL GeneID:617569 1 GENE LOC617569 NULL similar to Uncharacterized protein C3orf44 EMBV3_32716 AGATGGAAACCCCAGGCGGTGCAGAAGCCTGACCTGGGTATGAGACCTGAAGTGCATGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11840 CTGAAGCTATCAAACTGGAGACCGGGGTTGTCAAGAAACTCTACACTCTGGATGGAAAGC Gene GeneID:787968|LOC787968:XM_002699930:74_cdna Constitutive 0 NULL GeneID:787968 X GENE LOC787968 NULL similar to doublecortin EMBV3_17543 GATCTGAAGTACCACTTGGACTCAGAGGAGCTGCTTTAGTACAGCACTGTACAGCAGTTC Gene GeneID:516064|LOC516064:XM_002684772:285_cdna Constitutive 2 NULL GeneID:516064 1 GENE LOC516064 NULL similar to Uncharacterized protein C3orf17 EMBV3_22296 AGCAAAGAAGACCCAGTGCAACTGAAGAAGGAATTCATAGGGCCTGGACCCCGTCTTAGG Gene BVV0102_060730 - 1 EMBV3_34355 GK000030.2:82147631-82261155 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247355 TCONS_00247356 1 XLOC_151307 Coding TCONS_00247356 XLOC_151307 NonCoding Coding - X:82206371-82223345 - TSS185259 1463 2 TCONS_00247356_2 85 0.401913875598086 3 0.913981028692629 0.000362593815370006 0.000461518957543785 0.000507079626718139 0.000129692824548949 0.000263060629674935 4.29653227331923e-69 7.58283464131251e-05 0.000491725767273944 0.000309571988506984 0 0 3.47235877328021e-05 3.1601620243527e-06 5.1808710310451e-06 2.23922796222007e-06 0.000801684576406641 0.000204845565093309 9.82382603183735e-14 0.000182768540534079 0.000152727110734736 0.000229410747926421 8.51918414604343e-09 0.00139957394579532 0.000744203762071498 0.000138213093898372 0.000208243209432148 0.000345522558327678 2.04084419753832e-17 4.31072902933646e-17 0.000112912601093454 XR_232508.1 LOC101902488 PREDICTED: Bos taurus uncharacterized LOC101902488 (LOC101902488), 3e-155 553 85.12 0.336295283663705 0 noncoding 1 1 1 1 0.0373402331316274 0.733811762242467 0.020815702400378 0.73739521348994 GTTGCCGGGGGAGCCATTTTGGGAGTGCACGGCGGTTCTGCGCGGGGCCTATTTGGCTGTGACGCCTAGCCCAGGTTTCTACCGCCCTATGCCTTAGGGCTCATCTAAAACCTAAGATGGCGGTATTTGCATAGGGTGTAAGCGCTGCAGGCATACTTTATGTGAAAAGACGGCCAAAGGACGAGTCTCCTAAGGAATGTCCAGAAACGCGGATATTTGTGTTGTGCCATAAGCCAGGTGGCATCACAGACTCAATGGACATGGGTTTCGGTGGACTCCGCAAGTTGATGATGGACAGGGAGGCCTGGCATGCTGCGGTTCATGGGGTCGCAAAGAGTCAGACACGACTGAGTAACTGAACTGAACTGAACACCTCCTTGAACCTCACCTGCCCAGCCCTAGATACCAAGAAATGGCTCTGTGTGTAAAGAATCTGCTTGCAACGCAGGAGACACAAGAGACCACAGCTTTGATCCCTGGATCAGGACGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTTGTGCCTGGAGAATCCCATGGACAGGAGCTTGGCGGGGTACAGTCCAAAGGATTGCAAAGAGTTGGACATAGCTGATCAATTAAGCAAGCAAGCAAGCAAGCAATGTGATGCTCTTGATTACTGTAGCTTTTTTTTTTATTAACTCCTGACGTCAAGTACTTTATGTCTTTCCAACTTTTTTCCCTTTTAAGAAAATTGCTTAGGGACTTCCCTGGTGGTAATACAGTGGATAAAAATCTACCTGCCAGTCAGGGGACATGGGTTTGAGCCCTGGTCTGGTAAGATCCCACATGCTGTTTAGCAGCTAAGCCCATGCGCCTAGAGCCTGTGCTCCACAAGAGAAGTCACCACAATGAGAAGCCTGTGCACCTCAACTAGAGAGTAGCCCCTGCTCTCTGCAACTGGTGAAAACCCATGTACAGCAAAGAAGACCCAGTGCAACTGAAGAAGGAATTCATAGGGCCTGGACCCCGTCTTAGGCCTGTTCATGCTGATCATGCTTGGCCACCTCTCCAATGGACTCTGGACTCTGTGCTTAGTGCCTATGGAAACTACAATAGAAAGATAAGACCCCCTCTGGACAGGGGAATCTTGAAGATCACATCCAGGTTACTCATCGCCTAAGAGAAAACATACTCTAATCACCCCTGCCTCCGGACAGGTCATAAATTCTTTCTGTATCTATAGGAGTGTAACCACAGGCTTATTGATTATTAACTCTTTGAACACCTAACACTTGATAACACTGGAATAATGGGGTTATTGTGATTGTATTTAGCCTTCCTTTGTTTTATGTAAGTCTCAAGGAAATTGGGGTGGTGGGTTTGGACACGTACACATGGGGTATAAAAGATTTTCACAAACGTTGGTCGGGGTCCTTGGCTAAGAGGAGACTCTGCCTTGGGACTGCTGGTGTAATAAACTGCACTCCACTA TCONS_00244826 TCONS_00244828 TCONS_00244827 r 5' 53550 TCONS_00244826 TCONS_00244828 TCONS_00244827 r 5' 37637 EMBV3_02410 ACGTAGGAGGTATTTGGGGGAGGAGGTGTGTTATGCCTGATTTTGCCTGCTTTGTCTCGC Gene BVT0102_313525 + 0 NULL GK000026.2:21829145-21891107 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18768 GAAAGCTGGTCTACACCTAAGCACAGCTACAGACTGCGGTGGTGATGAAAGACATCTGTG Gene BVV0101_012680 + 0 NULL GK000018.2:56645625-56658489 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091135 1 XLOC_055911 Coding TCONS_00091135 XLOC_055911 Coding Coding - 18:56648522-56650431 - TSS68481 1909 3 TCONS_00091135_4 92 0.999476165531692 1 0 0.000156796944614236 0.000326349459553483 0.000649573668975734 0.000674249908486968 0.000284488970565727 0.000133038870573267 0.000360472592819239 7.74582535867918e-05 0.000132260064769077 3.44849819092648e-05 0.000342958292569161 0.000127368713361248 4.95997926870852e-05 3.69617321656724e-05 8.22410366777144e-05 0.00127284594524576 0.00679225445829657 0.0016429337649787 0.000371882545534843 0.000384246666582316 0.000289420277768267 0.000318751368129195 0.000595903931473557 0.000764024419904446 0.000714986438968418 0.000439188282646013 0.000610775983010508 0.000316986239511653 5.08602020496208e-05 0.00048186139041946 XM_005225184.1 GTF2IRD2 PREDICTED: Bos taurus GTF2I repeat domain containing 2 (GTF2IRD2), 7e-38 163 75.21 0.124148768988999 NR_040037.1 PTOV1-AS1 Homo sapiens PTOV1 antisense RNA 1 (PTOV1-AS1), non-coding RNA. 7e-158 562 69.42 0.761131482451545 TCONS_00091135_2 sp|A4IFA3|GT2D2_BOVIN GT2D2_BOVIN General transcription factor II-I repeat domain-containing protein 2; 6e-32 120 64.29 0.965116279069767 0 coding 0 0 0 0 -0.0422245741414482 0.707396027620059 -0.0416262659564167 0.399164692292219 GTCGCCTTTGGCACGGGGCTGGCACGGTTGGTGTCCCCGGGGTAGTATTCGGAGACAGTGAAATCTTTCTTGTACCCATGTCTCTACCAAAAGTGGCAAAACGAAAGAGAGAACGAGAGGGCCACGTGTTTCGAGAGAAATGGGAGCGAGCCTATTTCTTTGTGGAGGTGAAGAGCATGCCTACGTGCTTAATATGCAAAAAAATCGTGTCTGTGTTGAAAGAATACAACCTGAAGCGTCACTATGAATCCAAGCACAGTAAGAGCTTCGACCAGTACACAGAGCAGACACGAGACGCGATTCTCAATGAGCTGAAGAAGGGCCTCAAGTGTCAGTAGGGCCGGTTTCGGAAAGCCGACGGAAGCAGTGGCGTGGCTGCCGCTCGAGGCTCCAGAATCACGTGACACAAATCACCCAGGCGTTCCAGCCCACGGACATCCAGTTTATAAGGGAGCTGAAGAGACGCCCCCCGAACAGAAACCCCCGTCTGCTTGGACCGTCGTTTGGGTCCAGCAGGCATCCGCGTCTCGCGGGAGGGGAAGAGAAATCTGAAGATCGACACGTCCAGTTGCTTGACCGAGTCAGATCAGTCGTGGCCTTTACTATCGCTGCTCATGAACTATCACCACCCAGTTAGCTTTATTTATTTGTGGCATGGAGAATCTCGATGTGACTGAACAAAGCTGTGACATGGTGCCAAGGCAGGCCCGACCTTGGGAAGTGACTTGTTTTCTGTGTGTCAAGAGAAATACACACTTTTCATGAAAGCTGGTCTACACCTAAGCACAGCTACAGACTGCGGTGGTGATGAAAGACATCTGTGTCCCTGGGGACGTAGGCGGGTTACCTCAATCTGAGGGGGCGTCATTGCCAGAGACTCAAGTCAGGTCATCGCATCAATTACCAGGCCCCGACCTTGCCGTGAGAGGTCAGTGGAACACACGACACGGCACCTGTGACAGGGTTTTGTACCTTAACCATGGCAGGCTGGTGATGAACTTGACCCCAGTGTGTTTTATAGAAGCTCTGCGACCTTGTCATGTGACATGTGGAAGCAGTCTGAACTGTTGCAGTCCATCAGCTTAGCTCATTTCAGGTGAGCCAGCAGCCATACCTTGGTCCCCCTGAGAAGGTCAGTCAGAGACTTTGGGTCAAAGTTCCTACCCTTCTGAACATTCTTTTTCTCCCAAGGACATTCACAAATAGCTACTTGAATGTATGATCATGTTCACCCAGTCCAGGCAGAAATGGGGACGCCGTTGGCAGGGAGTATTCTGACTCCCTTTCCGTGGCTGCAGGTGGTCTCCAGAAATAAAGGGCATGGCCTGGACAGCGTCCACTCAACTCGTGGGGCTAAAGACCAAACTGCCCCAAGGCTCCCGGCATCCAGACTTGATGAAAACGAACGAACACTGCCCCATTTGCTTTTCTTGGTTGCTGTTGATCATGTGAGTGCGGACCGCAAATACTAGCCGCTGATCTCCAGGGCAGTGGGCTGCCGGTCGCCCAGTGGGCTCCCTCGGAAGACAGCCCTCACCACTCTCCAGCAGTCGCCTGAATCTCCATGTCTGGAAGCGCCCACGCTTGTGAGCAGCCATTTTCCGTTACACAACTGAATCAAGTTCAGTGCTGCCCCCAGCTTCAGGAGTCCAGGTCGAGTTCTCAGCCACCAGTCCCGCCCTTGACATCTGGGGGTGGCATGGATGAGGCCCACCCCCCGGCTTCATAGTCCAGGGAGCAGAAGAATTACGAAAGAGAAAACAAAAAAAATTTAGTAATTAAATATTTCTATTTTTCAATTTGTATTTTTTCAATTTGGATTTGAAAGATAAACTCCAGTACCATACCTGTTTGTATTATGTTCCATGCATTCACCAGCGTTCAGTAAAGATTCCATTTGATTATATTT TCONS_00084317 . 3' 1564 TCONS_00084317 . 3' 3472 EMBV3_09650 TGGTCCTCACCCTGGTGTCCTGGTTCTTACGTAGACGATTCTCTCTAGTCTCCCGGACTT Gene GeneID:507895|U2AF2:NM_001075336:148_cdna Constitutive 1 NULL GeneID:507895 18 GENE U2AF2 NULL U2 small nuclear RNA auxiliary factor 2 EMBV3_20975 ACTCGTGAGAGTCACTACCAGCCTCTCTTCTCAGGATTAATGAATGGGCCAGAAACCGTG Gene BVV0102_201373 + 0 NULL GK000030.2:82024164-82146881 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244820 TCONS_00244806 TCONS_00244811 TCONS_00244823 TCONS_00244814 TCONS_00244805 TCONS_00244815 TCONS_00244819 TCONS_00244818 TCONS_00244825 1 XLOC_150558 NonCoding TCONS_00244825 XLOC_150558 NonCoding NonCoding LOC100849028 X:82025012-82029274 = TSS183917 2898 2 TCONS_00244825_4 76 0.126984126984127 4 0.32081670969256 6.54326563085929e-07 1.84971908237081e-06 4.2791004881942e-05 5.9325802432916e-06 1.44648606482326e-11 1.06245620233538e-05 7.55328937892313e-14 2.24328091012383e-05 4.33260317668459e-05 0.000112646924660417 2.30084793143152e-05 8.6171482780664e-06 8.73023067864586e-06 2.16836857161372e-05 1.53364468095661e-05 0.0027428613849354 0.00395952998788966 0.00635123329263067 3.01392069769791e-05 2.86677220348019e-05 1.76497823656263e-05 0.00257882398154093 0.000748668836194779 0.00121682662647227 3.68079802974837e-05 3.82733682608658e-05 3.54311383978488e-13 0.000204843612139688 1.07100383028527e-32 0.000983893477168712 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 1e-69 269 89.42 0.0710835058661146 0 noncoding 0 0 0 0 -0.0332886525516839 0.803878537071351 0.00232015000904723 0.959227137133586 GGCTAGCCTTAGATCAAAGGAGTTACCTCTTTACTGGGGCATAGTGATAAGAATAGGAATTAGAAACAGTACTGATAAGGGTGTTGGAGATTTTTAATTGTAGAGGTGGGTGAGAGGAAGCTGACCAGGGACAGGATTACAGAAACAAGAGTCTTAAGAAATATCCAGGCCATATCAAAGTGAGCAACTAGTTTGAAACTTGATTAGAGACTCAGGAAAAGAAAAGGTAATCTTGGGCCATTGTCACAAGTAGCATTTGGTCGCCTAGAATTGATTTTGCTTGATTGAGGGATAGGGGCTTCTCAGGTGGCTCAGTGGTAAAGAATCCGCCTGCCAGTGCAGGAGCCACAGGAGATGAGCAGGTTCGATCTCTGGGTCGAGAAGATCCCCTGGAGGAGGGCATGGCAACCCATTCCAGTATTCTTGCCTGGAGAATTCCATAGACAGAGGAGCATGGTGGGCTACAGTCCAGAGGGTCACAAAGAGTCAGACATGACTGAATGAGCATGATTGAAGGATGGACAGCTAGCAAGAGAAGAGTTAAACACCAATGGATTTGAGTATCCAGATTGTATATGGAAGGAAGGTCAGAGTCTACATAGAAAAAGTGGCCTTAGTATGATCAGGATGGGTGCTGAGTCTTTGGAAAATGGTATGATAGGATCTATATCAGAGACTGAACTTTGGAATGGTAAAATTTAAAAACTGGAGTGATCAAGATACCCATGATGCTAGGATGTCAGATGGTTGTTTACTTGGGTATTGAAATGACCCAGGATTATAGCAAAAGCTGGATTAGGAATGAACACTGAGGGCTAGATAAAATAGGTTTCAGTGACTGAAGAATGATCTGGGGGTGGCACATGACAACTGTACAGGTGCAAGAGAAGAAAGGATGCAGTGGGTGGAAATTACTAGAAGATGCAAAAACTGTTGTTTTCCATTGCACTGAGGTTTTGGCTGGCAGAATGCACATCTAAAATGATTCCCTTCTCTATCAAGTGCTTATTCTATGCCTGACATTTTGCTGTGTGCCATATGTTTCTCCCTTTTGGTCTGTCACATATCCTGTGTGAAAATAAACAGCAATCCCAGGTGAGGGTTAGGGTTAGACTGCTGGCCCTTAGCACTGGTGCAATCCTGTTGCCATCTCCTAACTCTTTGAAAGAGCAGAAGGCTGGTCATCTGCAAGTGTCAGAAAAAGATTTAGGATCAAAATTTCCCCTTGACCTTGATGTAGCTTGATTACATGGTACATGCTTTTGTTGGCTGTGTTCCATAATATGCTTTGGCCTCTGAACCTCTGAGTTGAGGAGTGAACTAGAACTGTCCTTTAAAAGACAGGCACAGTTCCTTAAAAACACATATTAATTCAGAACGAGACACAGTCCTATTATCTAATTGAGCTTTTAAGATAAAGAGTAGACAAAAGAAAGCCCACATCAGTGGATGAATAACAAAACCACTTTGTAAAAGCCATTTAGGGTCAGGATACATCCAGTTTAGTGGCCCTGTTGTAGATGTTCCCTGTGTTGTTGGGAAGGAGGGCTGGGAATTGATGCAAAGAAATAGCCCTTAGAACTTGGAAGGTAAAGTTTAGGGTGAGTCTCTGTGAGCCCTCTGACACCGCATGCAGTCCTTTTTCTTTTGTTATAGTCTTCAAACGAGTCAATATTCCAATGAAGGTTTAGAGCCAGTGTGTTAGAGTGACCAGGCCTTCAGACAGCCTATCCCCTCCTGTGGGGGCTGCTGTATATTTATTCCTCAGGAGAAGCTGGTAGAAGACTTCATGAAGGAGAAGAAAAGGAAAAAAATCAAAGGATGACTACAGCCTCTCTTCATCTCAGCTTTGCAAAGCATGACTCAACAGAGAGATCACATTCTTGAAGACTCTCCAGACCACAGCCACCACAGACACTAACCACAGCCAGCAACTGGACCTCAGCCCTGGGATTTACTCTTGATGTCTCAACTGATTATGAAATCAGTAGGAGAGCTTGTATCCCTTTCTAACTTGCTCATCAGAGATTTTAAGATTTGCATACATGTGATTGAAGATAAGTTGTTGTGCTGCACTATTTCTGTTGCTACTCGTGAGAGTCACTACCAGCCTCTCTTCTCAGGATTAATGAATGGGCCAGAAACCGTGGGCAGAATGACTTCAGGCAACCCCAAACACCAGATATTGGCATAAGGAAACAGTACAATGAAAAGTCAATACTTGGACCTTTGTCATTCCACAAAGCATGATGTACTATCTAAAACAAAAAAGAAGAGCTGCTTTGGAGAAGGGTTTTAAAAGTTTGTTTCATCAGAAGAAAGATTTAGAAGAGGGAAAACTTCCAGTTATATAAGATGGGCATTTAGCTTTTAAAGGCATCTGTCCCCTGTGTAGGTCATTGAGATTGATACCAGGAGCAGACTGTGGCTGCCAAAGACAGTTTAACTAAGTGGTTTCATGCTCCTAGAGAGATGGTGTCACTCTCTTGTCTCTCACTTTGGTGGATATTCATCTGCAATGAGTCCAGTACCTGAAGGAGCAAGAGAACAACAAGTATACAGGGGGACAACAGTATGGCCTTCTGAGTGAAGATAGCAGCGGAAAATGTCATGAGATTGACTGCATTGGGCTGGGCTTGTTCTTTTAAAAAAAAAAAAACAAGTCTTATTTTTGATGATAAAAGTAACAGGTGGTCATAGTTAAAAAAATAAAGTGAAAGGTATAAATTAAAAAGTAAAGAATATGATTTTACAACTCAAAATCTTATCATTTGCATGTTTCCTTTTACAACTTTAAAAAAGTGTAACAGTTTAAAATTGACATTGTACTTGTTAATCTCCAACTTGCTCATTTGAAAATAAATAAGCATTTTTCCATGTCATTAGAATTACTTAAAA EMBV3_30977 GTCTCCAAAATGAGACAGCCCAAACCTCCTGACCCTGTGGGGCTTCAAATGGCTTGTGTA Gene GeneID:617315|LOC617315:XM_002697629:167_cdna Constitutive 0 NULL GeneID:617315 23 GENE LOC617315 NULL similar to Chromosome 6 open reading frame 146 EMBV3_26636 ACCTGGTCCCTGGCTGCCCGCGGGAATTCAAGCTGCGCTCTAGTGGCTACGCTGAGATTA Variant GeneID:513753|EDN3:NM_001101979:1033_cdna 808^879 2 EMBV3_37360 GeneID:513753 13 GENE EDN3 MGC143242 endothelin 3 EMBV3_02429 GAGTTATTGTTAGGGTCACATTAGCATCTTGCTGCTGATGATTGGGGAGACCACTGCCCC Gene GeneID:404129|DGAT2:NM_205793:17_cdna Constitutive 1 NULL GeneID:404129 15 GENE DGAT2 NULL diacylglycerol O-acyltransferase homolog 2 (mouse) EMBV3_03972 CGCTGTCGGCAGTTCTGCGCCCTCTTCTGTGATCCTGACTGAATCAATGCTTTATACTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40565 AGTAGATTCTTCCTGCGTTTACGTTCCAGTGCCACGGCCGTACGGTCCATTAACATCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39317 TGACGGAAGAGGATCAGGAGAATGAAGACCAGCTGTGGCAGTGGAGAGAGACATACCACT Gene GeneID:790103|SEC14L5:XM_002697954:656_cdna Constitutive 0 NULL GeneID:790103 25 GENE SEC14L5 NULL SEC14-like 5 (S. cerevisiae) EMBV3_04422 GCTCAGCCTGCTCAGAGCAAACCGCAGAAGACAGCCGCTCCGACCGCTGGTCCCAGATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13079 GAGTCGAGCGGAGAAGAGCCCGCCCGAGAGGTAGGAAGGCCAAGGAGATTATCAACACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37622 CTGAAGAGAGACTGAACTTAACCAACTCTCAACTCCTGGGCATGAGGTACAACTGCAGGC Gene BVT0102_143755 + 0 NULL GK000001.2:68668203-68894947 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32760 TGAAAGTCTTGCTGAGCTTCCGGCAATCATGACCCATGCATCAGTGCCTAAGAGTGACAG Gene GeneID:100297420|LOC100297420:XM_002689213:31_cdna Constitutive 0 NULL GeneID:100297420 7 GENE LOC100297420 NULL similar to cystathionase EMBV3_42130 GAGGAACACAGGCTCTTCCAGGAGGAGAACAAGGCGCTGTGGGAGAACAACAAGCTGAAG Gene GeneID:616053|SPERT:NM_001102297:211_cdna Constitutive 0 NULL GeneID:616053 12 GENE SPERT MGC165754 spermatid associated EMBV3_08774 GCACAGGTGTGCACTCACATCAAGGATTACGGAAAGGGATGTTTTAAAATGAGACTGACT Gene GeneID:616115|NFKB1:NM_001076409:11_cdna Constitutive 0 NULL GeneID:616115 6 GENE NFKB1 NULL nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 EMBV3_23819 TGCAATTTTAGCACTACATGTTCAATATATTTGTTAACTTGTTGAAGTTGATACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_14994 CCAACGACCACTGATGAAGATAGGTTGGAGTAACTGCTGAAACTGAATTTTGTTGACCAG Gene BVT0101_070251 + 0 NULL GK000002.2:91686143-91754397 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102974 TCONS_00102975 TCONS_00102971 TCONS_00102978 TCONS_00102979 TCONS_00102972 TCONS_00102976 TCONS_00102970 TCONS_00102977 TCONS_00102973 1 XLOC_061986 Coding TCONS_00102976 XLOC_061986 Coding Coding NBEAL1 2:91732629-91873286 j TSS76566 7420 1 TCONS_00102976_10 2366 48 0.947588442725515 0.000454564952090077 0.000233769297307846 1.85588191916498e-05 4.01838172217405e-10 0.000156766048809066 2.71597386881898e-09 0.000291316513733366 7.21572136103635e-21 4.88173947268561e-08 4.34291080392295e-07 1.13339953546368e-11 2.67773425646665e-14 8.39768070191603e-05 1.90159156249719e-16 4.33851882876991e-17 0.00570761295828792 0.000463714512859502 1.2245576618736e-06 1.4079825315352e-05 0.000452940120337138 7.9723092522503e-14 0.00110122555876375 4.20646234230453e-13 2.38489239006879e-06 0.000809236978967359 0.000562380439976286 0.000177959958219642 9.47884915216611e-11 7.1022305851217e-11 2.34468210623556e-20 XM_005202694.1 NBEAL1 PREDICTED: Bos taurus neurobeachin-like 1 (NBEAL1), transcript 0.0 1.322e+04 100.00 0.987735849056604 XM_005246786.1 NBEAL1 PREDICTED: Homo sapiens neurobeachin-like 1 (NBEAL1), transcript 0.0 1.059e+04 91.64 0.999865229110512 TCONS_00102976_10 sp|Q6ZS30|NBEL1_HUMAN NBEL1_HUMAN Neurobeachin-like protein 1; 0.0 4489 91.68 0.999577345731192 0 coding 1 0 0 0 -1.46067181791851 0.028383943137613 -0.0448270412308995 0.440946571420123 GGGTGACACGGGGCTTTGGCTTGAGAAGGGGGCGAGGGAAGCGAGTTAGACGTCGGCTTGGCGGCAGCGGCGGCGGCACAACCCCCCAATATTTTTATAATTATCCAACGACCACTGATGAAGATAGGTTGGAGTAACTGCTGAAACTGAATTTTGTTGACCAGAAGGCAGTCCATTTGTTCCACTTCTTTTTGTTTTCCTTACTGCTTTGAGCTTTACTGTAACGGCTGAAAAACTTGGAAAATAAAATGAACACTCTATGGTCTTGAACTTTTTTTTTTTTTTGGAGGAAAAATTAAAGTGCCAGAGTGAAAGCCAGAATGGCATCTAGAGAGAGACTCTTTGAACTTTGGATGCTTTATTGTTCAAAGAAAGATCCAGATTACCTGAAGCTGTGGTTGGACAGTTTTGTTTCTAGCTATGAACAATTCTTAGATGTTGACTTTGAAAAGCTGCCTACCAGGGTGGATGATGTGCCTCCTGGAATATCTCTGCTTCCTGATAATATTCTGCAGGTTCTGAGGATCCAGCTTCTACAGTGTGTTCAGAAAATGGCTGATGGGTTAGAGGAAGAACAGCAAGCCTTGTCAATTTTGCTTGTCAAGTTCTTCATTATTCTTTGCAGAAATCTATCTAATGTAGAAGAAATTGGGACCTGCTCATATATCAACCATGTTATCACTATGACAACACTCTATATTCAGCAATTAAAAAGCAAAAAAAAAGAGAAGGAATTGGCAGATCAGACATCTATTGAAGAATTTGTGATCCATGCATTGGCATTTTGCGAAAGTTTATATGATCCATATCGGAATTGGAGGCAACGAATTTCAGGACGAATCTTTAGTACTGTGGAAAAGAGCAGACAGAAATATAAACCAGCTTCTCTCACAGTGGAGTTCGTCCCTTTCTTTTATCAGTGTTTTCAAGAAAGTGAACATCTCAAGGAGAGTCTTAAGTGTTGCTTATTGCATCTCTTTGGAGCCATAGTAGCTGGTGGGCAGAAGAATGCTTTGCAAGCAATTTCTCCAGCCACCATGGAAGTTCTTATGAGAGTTTTGGCTGACTGTGATTCTTGGGAGGATGGAAATCCTGAAGAAGTGGGTAGGAAGGTAGAACTTACTCTGAAGTGCCTTACAGAAGTAGTGCATATCCTTCTCACTAGTAGCTCCGATCAGCGTCAGGTGGAAACCAGCACTATTCTGGAGAACTATTTTAAATTGCTAAATTCAGATCATTCAGCTTTACCTAATCAAAGGAGGTCCAGACAGTGGGAAAACCGGTTCATAGCTCTTCAGATCAAAATGCTGAATACCATCACAGCCATGTTAGACTGCACAGATAGACCTGTTCTTCAGGCTATTTTTCTTAACAGTAACTGCTTTGAACATCTCATACGACTGCTACAGAACTGCAAGCTATTTTTAAATGCTAACAGTAAGGTGGCAGACAAGAACGAGAAAGACCTTGCCAACAAATTACTGACAGAAATGAATGAGGACCAGGTGTTTCAGGGACAGTTGGACTATTTGGCTGTATCAGCTATTCAGGCTTTGACAGCAGTAATGAACAAATCTCCAGCTGCTAAGGAAGTATTTAAAGAACGAATTGGTTATACACATATGTTTGAAGTATTAAAATCACTGGGTCAGCCACCACTGGAGCTACTTAAAGAACTTATGAATATGGCTGTAGAGGGTGACCACACTTCAGTGGGTATTTTGGGCATTAGTAATGTCCAGCCTCTCTTGCTTCTTATCCAGTGGCTTCCAGAGCTAGAATCCCATGACCTGCAAGTCTTCATCTCAGATTGGCTGAAAAAAATTTGTTGTATTAACAGGCAGAGTCGAACTACTTGTGTCAACGCAAACATGGGAATTAGAATCATCGAAGCCCTTAATTCCCATTCTTGCCTCCATCGAACTTGTGCTGAGAACTTGATCGCTCTCCATGGTTCCTTGGGGAGTCAGTCAGTGAGCTCAGAAGAAATCCGCCAACTACTAAGATTGCTAAGAGTGGATGAATCTGAATCTGTTCACCCCTATACCACTCCTGTAACTCGAGCAATCCTGACAATGGCCCGAAAACAAAGTCTAGAGAGTGCTCTTCAGTATTTTAATTTGTCACATAGTATGGCAGGAATTTCTGTGCCTTCCATACAGAAATGGCCAGGGTCTGCCTTTTCTTTCAATGCTTGGTTTTGCTTAGATCAGGATCAGTTGACTCTTGGCAACGCTAACAAAGGAGGAAAAAGAAAACAATTATACAGCTTTTTTACAGGAAGTGGTATGGGTTTTGAAGCTTTTATTACCCATTCAGGTATGTTGGTTGTGGCAGTGTGCACGAAAAGAGAATATGCGACAGTTATGCTTCCTGACCACAGTTTCTGTGATTCCCTCTGGCACAACATAACCATTGTTCACATGCCTGGAAAAAGGCCCTTTGGTCAGAGCCTTGTGTATATCTATGACAATGGACAGCAGAAGGTCTCTGCCCCGCTGAGATTTCCTGCCATGAATGAACCTTTTATTTCTTGCTGCATTGGTTCGGCTGGGCAAAGAACCACCACTCCTCCACCATCCCAAATCCCAGATCCACCTTTTTCTTCTCCTATTACTCCTCATCGGACATCATTTGGTGGAATTTTGTCTTCAGCCTCCTGGGGAGGGACAACTGAAAAATCAAAATTGATTACCAAATTGATATCGGCTGGAACCCAAGACAGTGAATGGGGATGCCCCACATCTCTGGAGGGTCAGCTGGGGTCTGTTATCATCTTCTATGAAGCACTGCAGCCTCCTCAGGTGAAGGCATTATATTTAGCAGGTCCAAACTGTTTAAGCCCTTGGAAATTTCAAGAGTCTGACATGGCTGACCTACCTGGTAACGTCCTTCTTCACTACACTGCAAAGGCCTGCAAAAATGCGATCTGTCTTGATTTATCTACTAATTGTTTCCATGGAAGGTTAACAGGAAACAAAGTAGTAAACTGGGACATTAAGGATGTTATAAATTGCATAGGTGGATTAAATGTACTCTTTCCTCTATTGGAACAAATCAGCCACTTTGGTGAAGGACAGATTCCTGAAGGATTGAATGAAAGCACAGTTTCTGAGTTGATAACACCTGTAGAAGGAGATTGGGTGGTATTGACCTCCACAAAGGCATCAGAGTCAAGACTCGAGAGAAATTTAATTGCAACATTTATCTTGATTGTGAAACACTTTATTCAAAGACATCCTATTAACCAGGACAACCTTATTCACTCCCATGGAGTTGCTGTTCTTGGAGCCTTACTTCAGAAGGTGCCTAGTGCTTTGATGGATGTTAATGTATTGATGGCAATTCAGTTACTCATTGAACAGGTATCATTAGAGAAAAATATGCAGCTCCTGCAACAAATGTATCAGTATTTACTCTTTGACTTCCATATTTGGAACCGTGGAGATTTTCCCTTTCGAATTGGTCACATACAGTATCTTTCTACCATCATCAAAGACAGCAGGAGAGTTTTCCGAAAGAAGTATGGTGTACAATTTCTCCTGGATACACTTAGGATTTATTATGGGAATGATTGTAAATATAATGAGCTGTCTCCCGATGATATTCGAACAATAAGGACTTCTTTGTATGGACTAATTAAATATTTTCTGAGCAAAGGCGGAACTCATGAAGAGATACAAAGTATTATGGGTTACATAGCTGCTATCAATGAAGAAGAACAGCTTCTTGGAATTTTGGACATACTCTTCAGTCTTCTACGTACCAGCCCAAATAGAGGTCAGCTTTTCTTACTGCTGTTTGAACCTGGAAATGCTGACATACTTTATGCCTTACTCTTAAATCAGAAGTACTCTGACAAACTAAGAGAAATCATTTTTAAGGTTATGGAACAGATGTTGAAATGCACAAATGTTTATGAACGAAGTAAACAACGTATTCGACTCAGAGAAGTTGGCTACTCAGGATTTGGACTCCTTCTTAATGAAGCACCTGTTAATACTTCTCTCATTAAAAGTCTCACCAATCAAATTATAAATACAGATCCTGCTATTAATTTCAAAGATCTGTTATCTGTGGTATATATATCTCACAGAGCCTATATAAATGTCAGGGTGGTCATCTGCAGAAAGATGCTACAGATTTTGCAGTCCCAGCCAGATGCAGCACATCAGATATCTCAACAAGTGGGCTGGCAAGACACCTTAGTTAAGCTTTTTTTAAAAGCAAATTTTGAAAATGGAAATACTCTTCATAAGCACAATAGGGCTATTATAGTGAAAGACAATGATAAAAATATATCAGTGGAAGATATGAAGAGGAGCTTTGACGAAAAGACAGATGAAGAAAAAATTGCCTCTTTTGCCTCAGCTCATGTATCTTCAGATGAGTGGAGTTTGGAGGATAGACATTCTCTAGACTCAAACATGCCATTATTTCAAGAAGATAGCTCGATGGGAGAATTATCTTTCAAATCAGAGAATCAAGAAGAATTCTGGCATAATAACCCTTCACCTCTGAGTTTAGATCTCAGTGGAATTGATTCATGTGAACTGAGTGATGGTGGAAGTCAAATGCCAGACAGCCTGCCTAGCACTCCTTCCCCAGTAGAGTCCATGAAGCCATTTCCTGTACAGCCTGACAAAGAAAGCAGCGTCACAAATGATGTGGGTTTTAGTGATGACTTCTCTTTACTTGAAAACAAAGAGAGATGTGAGGAGGAGCTTATTCAGTTACTGACCAATATTTTGAGCTGTATAATGTGTAAGGGACTGGAAAAGTCTGATGATGATACTTGGATTGAACGGGGACAAGTGTTTTCAGCACTAACTAAACCAGGAATATCCAGTGAGCTACTTCGACCATCAGATGAAATAAAACTAGTTTTGCTACAGAAGATGTTAGAATGGGCCGTCACAGAAAACAGAGAAGCAAAAATGAATCCAGTAACTGCTGAAAATGCTTTCCGACTCACACTGATCATACAGGACTTCCTGCAATCAGAGGGACTAGTCAATTCGAACATGTGGACTGAGAAGCTTTTAGAGGATTTGATGCTGCTCTTCGACAGTCTGTCAGTTTGGTATTCTGAAAGTCCAGTAGGGGTGAAACTCTCTCAGATTCAAATCCAATTGCTGCTTGGCTTCATTGGAAAGGGTAATTTGCAGGTTTGTGCAATGGCATCTGCTAAACTAAATACCCTTCTTCAGACCAAAGTGATTGAAAATCAGGATGAAGCATGTTACATTTTAGGGAAGCTGGAACATGTTCTAAGTCAGTCAATCAAGGAACAGACTGAAATATATTCATTTCTGATTCCCCTTGTCCGTACCCTAGTTTCTAAAATTTATGAACTTCTCTTCATGAACTTGCATCTGCCTTCTTTACCTTTGACTAATGGTAGCGCTTCATTTTTTGAAGATTTTCAAGAATATTGCAGTTCAAATGAATGGCAAGTTTACATTGAAAAATATATTGTACCTTATATGAAGAAATATGAAACCCATACGTTTTATGATAGTCATGAGAGCATGGCACTTTATTGGAAGGATTGTTATGAAGCCTTAATGGTGAATATGCATAAGCGAGACCGGGACGGGGGAGAAAGCAAGCTCAAGTTTCAGGAGTTTTTTGTGGAGCCATTTAATCGAAAAGTACGCCAGGAGAACTTGAGGTATAATAACATGCTGAAACAACTTAGCAGTCAGCAGTTAGCCACTCTGAGACGCTGGAAGGCAGTGAAGCTTTATCTTACATGTGAAAGGGGACCTTGGGCAAAAAGGCAACAAAATCCAATTCACTGGAAACTAGCTAATGTAGAAAATTATTCCCGCATGAGACTTAAATTGGTGCCAAATTATAATTTCAAAACCCACGAAGAAGCTAGTGCTTTGCGAGATAATCTAGGTATCCAACACTCACAGCCTTCCAGTGATTCATTGCTTCTGGAAGTGGTGAAACAAGTAAAAGTTAGTGATATGGAGGAGGATAAATTAGATCTTCCTGAAGAGGAAATAACATCCAGAGTAAATATTGATGAGAAAGAAGAACAGAATCAAAAAGAAAAATTGGTGTTATCAGAAGACTGTGAACTCATTACAATAATTGATGTAATTCCTGGCAGATTAGAAATCACTACTCAACACATTTACTTCTATGATGGCAGCATTGAAAAAGAAGATGGAGTAGGCTTTGATTTCAAGTGGCCTCACTCTCAAGTTCGAGAGATTCACCTACGACGGTACAATTTAAGGAGGTCAGCCCTTGAGATTTTTCATGTTGACCAATCCAACTACTTTCTCAATTTCAAAAAAGAGGTTAGGAACAAAGTATATAGCAGACTGTTGTCACTTCATTCTCCAAATAGTTATGGAACCAGATCACCACAGGAGTTATTCAAAGCATCAGGACTGACACAGAAATGGGTAAACAGAGAGATATCAAATTTTGACTACCTCATTCAGTTAAATACAATGGCAGGACGAACCTATAATGACCTTGCACAGTATCCTGTGTTCCCCTGGATTTTACAAGATTATACTTCAGAAGAGTTGGATCTTAATAACCCATCTGTATTTCGAGATCTATCCAAACCAATTGGGGTAGTTAATGATAAGAATGCCAAAGCCACGAGAGAAAAATATGAAAATTTTGAGGATCCTATGGGAACTATTGACAAATTTCATTATGGTACTCACTATTCAAATTCTGCTGGAGTTATGCACTATCTTATTCGTACAGAACCATTCACCACCCTCCACATCCAGCTTCAGAGTGGAAGGTTCGACTGTGCTGATCGACAGTTCCATTCCATCCCTGCTACCTGGCAGGCTCTCATGGACAATCCATATGATGTGAAGGAACTTATTCCTGAATTCTTCTATTTCCCAGAGTTTTTGGAAAATCAAAATCAATTTAACTTGGGTCGTCTACAAGTTTCCAAAGAACTAGTAAATGATGTCGTTCTCCCCAAATGGGCTAAGTCTGCTGAAGATTTCATCTGTAAACATAGGAAAGCTCTGGAGTCCGAATATGTTTCTGCTCATCTTCATGAATGGATAGATCTGATTTTTGGCTATAAACAGAGGGGGCCGGCTGCAGTGGAGGCACTCAATGTTTTCTATTACTGTAGTTACGAAGGAGCTGTGGATCTGGATGCCTTAACAGATGAGAAGGAAAGAAAAGCCTTAGAAGGGATGATTAACAATTTTGGGCAAACACCTTGTCAACTGTTAAAGGAACCACACCCTTCTAGATTATCAGCAGAGGAAGCAGTGCAGAAGCAAGCCAAAACAGACACTTCAACCTTTAACCTATTTCAACACCTCCCTGAACTCAAGTCATTTTTTATAGAGGGAATTAGTGACGGTATTCCGTTAGTAAAGGCAATTGTTCCCAAAAATCAGTCTCGTTCTTTTAT EMBV3_06165 ACTGAGTGTCGGTACAACACAAAAGATAGAGCCCGGATGACTTGGGGAGGATTAAGCACC Gene GeneID:507076|MOXD1:XM_002690224:15_cdna Constitutive 0 NULL GeneID:507076 9 GENE MOXD1 NULL monooxygenase, DBH-like 1 EMBV3_35311 ATTCACATAGCTCTGCTGCCCAGGCCAAAGTTGCCCCAAACTGGAAGACCTGCCTCCCGA Variant GeneID:516952|SATB1:NM_001102040:14_cdna 557^683 2 EMBV3_29522 GeneID:516952 1 GENE SATB1 MGC165895 SATB homeobox 1 EMBV3_00656 CACCGTAAGTCATAACCATCGGATCCATGGTGGGGACTGCCGAATGAAGAGTGTACTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32822 CTGCCCCCACAAGAAGAATCCCACCTTATAGACTTGTCTCTGTAATCGCCTGGTGTATTG Gene GeneID:282388|TXNRD1:NM_174625:914_cdna Constitutive 1 NULL GeneID:282388 5 GENE TXNRD1 NULL thioredoxin reductase 1 EMBV3_17022 CCACCTGCTCATTACCAACAGCATCAAGAATGACCTGAGCCAGGGGATTGAGGCTGTCCA Variant GeneID:100126076|AP1G2:NM_001109808:11_cdna 794^934 1 EMBV3_14187 GeneID:100126076 10 GENE AP1G2 MGC159942 adaptor-related protein complex 1, gamma 2 subunit EMBV3_24276 GAAATCTGTGCCCAACGTGGTAAATCTGGTTGAAGCTGACTATTCCTACTGGACCCTCGG Gene GeneID:789150|GLT25D2:XM_002694212:64_cdna Constitutive 0 NULL GeneID:789150 16 GENE GLT25D2 NULL glycosyltransferase 25 domain containing 2 EMBV3_25591 ATCGGATCACCACCCCCACCCACGTGCCTCTCCAGTACATCGGCCCCAACCAGCCCCAGA Gene GeneID:282060|SARS2:NM_174457:508_cdna Constitutive 1 NULL GeneID:282060 18 GENE SARS2 NULL seryl-tRNA synthetase 2, mitochondrial EMBV3_07144 AGAGCTCAGGACTCTCCATCAGAGTTTGGGAAGGTAACCCGGATGTGTTTTGCTGTGTTC Gene GeneID:540044|GPR84:NM_001038568:37_cdna Constitutive 0 NULL GeneID:540044 5 GENE GPR84 MGC137342 G protein-coupled receptor 84 EMBV3_40010 TCCTTTGGATAGAGTTTCACAAATTGAGTATGGGCTAGTGGTCAGTGGGCTTCTCTCCCC Gene GeneID:790244|TMEM170A:NM_001099213:130_cdna UTR3_Alt 1 NULL GeneID:790244 18 GENE TMEM170A MGC159606 TMEM170 transmembrane protein 170A EMBV3_01331 TGACATGGCGGCAGCGGCGGCGATTGCGGCGTCAGGCAGGCTGGCCTGTACTCCATCAGT Variant GeneID:613886|PTPLB:NM_001130757:101_cdna 106^658 1 EMBV3_27004 GeneID:613886 1 GENE PTPLB NULL protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b EMBV3_16294 TTTGAACTTGTACCCCCTGAAGTGGAAGCACAGAGTCCGAACCACTGGACAACCAGGGAA Gene BVV0101_081263 + 0 NULL GK000018.2:51837502-51877253 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10272 CTCCCAATCAACACTTGCTTAACATTCGCTGTTCTACTCTTTACCATCACAGGTTCACTC Gene BVV0101_003856 - 1 EMBV3_29234 GK000022.2:29056985-29307067 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43003 CGGCCGGCGTCATGACGCTTTTCCACTTCGGGAACGCCGGCAAGGGGGAATACAAGATCA Variant GeneID:535038|TMEM147:NM_001034624:691_cdna 128^376 3 EMBV3_09600 GeneID:535038 18 GENE TMEM147 MGC127848 transmembrane protein 147 EMBV3_42949 TGAAGCGCCGGAGTGTTGAGGTGTCTAGTATCACTGTTTCCCCAAAAGTAAAACGCATCC Gene BVT0101_045338 + 0 NULL GK000025.2:2988739-2992453 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144342 TCONS_00145994 2 XLOC_088536 XLOC_088993 Coding TCONS_00145994 XLOC_088993 Coding Coding TRAP1 25:2989492-3028815 j TSS109274 4624 1 TCONS_00145994_3 563 0.176903114186851 20 0.882915416306393 0.000203053342046824 0.000181913069198163 0.000113371347457713 4.23507694914539e-05 0.000260231703197258 2.01434668602708e-05 3.53894013881543e-28 1.9001488280417e-05 2.45897427411281e-05 3.29456064960135e-05 1.31635490362111e-05 6.06164817729707e-05 2.94104552179741e-06 2.13320024537578e-11 4.46056509970603e-05 4.42313448344156e-08 3.58614637281159e-34 0.000260567062437888 0.000607135859381811 7.29521481213522e-19 1.86467785558142e-05 0.000476607444867272 1.27801830579205e-09 0.000214484053032833 5.55920221640655e-05 0.000216348761839777 7.2385642661373e-05 0.000342449138226389 0.000104962207031152 1.24684003566452e-05 XM_005224381.1 DNASE1 PREDICTED: Bos taurus deoxyribonuclease I (DNASE1), transcript 0.0 4049 100.00 0.485294117647059 NM_016292.2 TRAP1 Homo sapiens TNF receptor-associated protein 1 (TRAP1), transcript 0.0 2399 86.16 0.439662629757785 TCONS_00145994_3 sp|Q2TBI4|TRAP1_BOVIN TRAP1_BOVIN Heat shock protein 75 kDa, mitochondrial; 0.0 1159 99.82 0.998223801065719 2 coding 0 0 0 0 0.127496376842734 0.318406568728371 0.0943077525262302 0.106744003334186 GAGAACCCTTTGTGAAAGAGAGAGGTTGAGAAATCGCCACAGGCACTCCAGCTTTCAGCACCCACCACCCTCATCAGTCAGCACCCACCGACGGCAGAGCAAGACCTCCACCAGCAAAGAGATTGGGACTTGCTGGAGTCTCAGATGATGGGAAACCAGTTCTGTGTCCCTGGAGGCCCCCAGCTCAGTCCTGGGGTCCCCCGCGAAGCCTGGCCTCGAGCTTCCACGTGGGACGGCCGTTCAGCTCCCAGGCTGCTGAGGACCAGGCGGAGGCGGGGCCCCTGCACTCGGTCATCAGCAGCTTGGAGGCTGTGCAGGGTTCTGCTACCAAACACGAGTTCCAAGCTGAGACGAAGAAGCTCCTAGACATTGTTGCCCGTTCCCTATACTCAGAAAAAGAGGTGTTCATTCGTGAGCTCATCTCCAACGCGAGCGACGCCTTGGAAAAGCTGCGTCATAAGCTGGTGTCTGAAGGCCAAGCGCTGCCAGACATGGAGATTCACCTGCAGACCGACGCCGACAGAGGCACCATCACAATCCAGGACACCGGCGTCGGGATGAGCCGGGAGGAGCTGGTGTCCAACCTGGGAACCATCGCCAGGTCCGGGTCAAAGGCCTTTCTGGATGCGCTGCAGAACCAGGCGGAGGCTGGCAGCAAGATCATCGGCCAGTTCGGTGTGGGCTTCTACTCAGCCTTCATGGTGGCCGACAGAGTCGAGGTCTATTCTCGCTCGGTGGATGCAGGCAGCCTTGGGTACCGGTGGCTTTCAGATGGCTCTGGGGTGTTTGAAGTTGCCGAAGCCTCGGGAGTTAGAACTGGGACGAAAATCATCATCCACCTCAAGGCCGACAGCAGAGAGTTCGCCAGCGAGGCCCGGGTTCGAGATGTGGTGACAAAGTACAGCAACTTTGTCAGCTTCCCTTTGTACCTGAACGGAAGGCGCATGAACACTCTGCAGGCGATCTGGATGATGGACCCCAAGGACGTGGGCGAGGGGCAGCACGAGGAGTTCTACCGCTACGTTGCGCAGGCCCACGACAGGCCACGCTACACCCTGCACTACAGGACGGACGCGCCGCTCAGCATCCGCAGCATCTTCTATGTGCCGGACGCGAAACCATCCATGTTTGACGTGAGCCGGGAGCTGGGCTCCAGCGTGTCGCTGTACAGCCGCAAGGTCCTCATCCAGACCAAGGCCACCAACATCCTGCCCACGTGGCTGCGCTTCGTCCGGGGTGTGGTGGACAGCGAGGACATCCCCCTGAACCTCAGCCGGGAGCTGCTGCAGGAGAGCGCGCTCATCAGAAAACTCCAGGGCGTTCTGCAGCAGAGGCTGATAAAATTCTTCACTGACCAGAGTAAAAAAGATGCTGAGAAATATGCCAGGTTTTTTGAAGATTACGGCTTGTTTGTGAGAGAGGGAATCGTGACCACAGCTGAGCAGGAGGTCAAGGAGGACATCGCGAAGCTGCTGCGGTACGAGTCGTCAGCACTGCCTGCTGGGCAGCTGACCAGCCTCTCGGACTACGCCAGCCGCATGCAGGCCGGCACCCGCAACATCTACTACCTGTGTGCCCCCAACCGGCACCTGGCGGAGCACTCGCCCTACTACGAGGCCATGAAGCGGAAAAACACGGAGGTTCTCTTCTGCTACGAGCAGTTTGATGAGCTGACCTTGCTCCACCTGCGTGAGTTTGACAAGAAGAAGCTGATCTCTGTGGAAACAGACATTGTCGTCGACCACTACAAGGAGGAGAAGTTTGAGGATGGCGCCCCAGGAGACTGCCTGTCAGAGAAGGAGACCGAGGACCTGATGGCCTGGATGAGAAATGCGCTGGGGTCCCGCATCACCGACGTGAAGGTGACTCTCCGGCTGGACACCCACCCTGCTATGATCACGGTGCTGGAGATGGGAGCTGCCCGGCACTTCCTGCGCATGCGCCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTGCTGCAGCCCACGCTGGAGATCAACCCCAGACACGTTCTGATCAAGAAGCTCAGTCAGCTGAGAGACAGCGAGCCTGACCTGGCCCAGCTGCTGGTGGATCAGATCTACGAGAACGCCATGATCACAGCGGGACTCATCGACGACCCTCGACCCATGGTTGGACGCCTGAACCAGCTGCTTGTCAAGGCCCTGGAGCGACACTGATGGCCGCAGACAAGGGGACAGACGCAACCGTGGGGCAAGGCGGCCTGCAGCCAGTCACTAGGGAGTAGGGACACACACAGGAACGACTGGGTGCGGATGTTGAAGGCTGCTATCTTCAGGGACAAGCCCAGCTGCAGCAGACCAGCGAGGGCGAGCAGCAGCCCCATCAGCCTGGTGCCCCTCATCCTGGAGCAAGAGAGGTCAGAGATCCAAATCACTTCACTGAGCTGAAATCAAGTGTCACAGGCTGCACACCCTCCGGAGGTTCTGGGAGGCCCTTTCGCCCTCTTCAGCTTCTGGAGGCTCCTGGTGTCCTTGGCTGTGGCTGCATCAGTTCACTGCCTTCTGTGTCGGTTCTTCCTCCTCAGAGAAGTAGGTGAGTGAGTGTAGGGTCCTCCCAAATAATCTGGGACCATCTCCGTATTATGAGATCCTTTTTGGCTGTGTGATGTTTCCAGGGATTAGGACATGGATGTATCAGAGGCAGGGTGGCATTATTTAGCCCATCACCCCATCAATGGCGGCTCTGCCCCGTTAGGGAGAGGCTGTGGTCTCCAACAACAGCCCTGCAAGTAGGAAGGCTGGGTCCCTCCCTGGAATGGAAAGGCCTTGCTGTGGCGGGCGTGTGGGGTTTGTGTGTGCAGGGCCACAGGGGACTGGGGTTCAGGGAGCAGGAGTAGTCTGAGAAGAGCAGTCTTCAAGGACCAAGGTCAAAATCACAGAAGTGTCATGAAGGAGGACACGGGGGATTAAAAACAACTCGAAGTAAACCAAGACCAGAACCCCCTGAAGTAATGAGAACATGCTGATGGACAGCTCTGGCAGTCAGCAGGAGTGCTAGTCAGCTTGAAACGGCATCTACAACGCAGGGTCACGTGGCCTTGCCCTCAGGCTGCCAGGACCCGCCCCCTGCAGCCTTTTGCTAAGGTTGGACTGCTGACTCTCCTGTTTAAAATTTTTTTAAACAGTTTAAGACTGCAAGAGGATCAAAATCAAGATTCTAACCACTAACCAAGTCCATCAATGCATCCAGAATAGGTGCCTGCCTTCCATGGATTTCTTCCATGGACACACAGGTGCACATCTTTGAGGGGAGCACGGGAATAAACCAGTAGGTGGCACAGCCGTGGCTCACACAGAGGGTACCTGGACCCCCCGCCCAGTTTTCAGGGACACAGGCACCCCATCAACCAAACACTGCCCCGTACGTGCCAAGGAGCTGCCCTCCCTCACCAACCTGCCAGAGAAAAGGTCCCGACTATGGCCTCACTTGCACCAAGTGCCCAACTCTGCTGCCACACCAGCGGCCCTAAGTTAGGCCCACAAGAGAGGCAGGCAGCTCAGCCCGGGAAGAGCCCAGCCAAGAGTCAGGGGTGTGGGGCCCAGTCCAGTCTCACCCACTGCACCTTTGACCACTCTGAACCTCAATATCTTCGACTCTAAATAAAACGGGGATAAATCCATCACTGTTTTCCTCTTAACTTTGTCTTAAGGATCAACAGATAGAACAAAAAGATCATCTCACATCTTAAAGCTTCATCCTATCCTAAACCACCACTTCCCTGGTGGTGTAGTGGCTAAAACTCCACGCTCCCCACGTAGAGGTCCTGGTTGGATCCCTAAACAAGATCCCACGTGCCGAAACGAAAAGATCCTGCATGCTAACTAAGACATGCAGCCAAAAAAAAAGACCCAGTGAGTGCCCCCAAGAACTTGGGGGTGGAGGGGCGTGACCTGCACACCAGCATGTGGCCCAGGAGACGAAGGTCCTCAGGCCCAGGGACAAGAAGCGCACGAGGCAACAGGGCACGGAGGCGCCCGCAGCGACCTGCAGGCACAACAGGATGCGTTTTACTTTTGGGGAAACAGTGATACTAGACATCTCAACACTCCGGCGCTTCAACATGACATCTTGCTACGTTGCTTTGTGTGGTTTCATGTCTGCAAAGCTAGGTTTCTGGCAGTTACAGTAAAGGCAATTACTGCGTAAGTCAATATGGAAAAGGCAACAAGGGTAAGCATGTCCAGTCTGATTCCAAAATTCAAGAAGAGCCTGAAAGGCAAACGTTCCACTCCTAAGTAATTACGGTTACTTAAAAATGCAATGAAAAAAAATTACGTTTACATTATTTTCCAAATGTCTATTATAAGTTGTTAGGATATAAATACTATACTTAAACTGTATGGACTTAACTATTTAAAAATGTTACTTCTTTGGCCTGTGGGTCCCTTAAAATATTTACTGACCTTAACTAGGGGTACTCTGAGAGTCTGGGACCCTCTAACACACACAATGGGGGTGCCCCCTCCCACGATGGCCCTCGCCTGCCCAGACGCCTCAGGCTCACCTGAGTCCCTGCCTTCCCTCGGCTCCACCCGCTCTGGTTCTGCAGCGCCCGTGCCTGCCCTTCCCTGAACACAAGCAAACGCGCCCACTGGTC EMBV3_24021 GTCCTTTCTGGGACCTCATTGGGTCACGATCCGACTGGATGAAAAGGACTTGGCTATGAA Gene GeneID:506193|RASL10A:NM_001083645:38_cdna Constitutive 0 NULL GeneID:506193 17 GENE RASL10A MGC142945 RAS-like, family 10, member A EMBV3_43758 GCTTGTGACTATTTCCCCCTATTGAAACTATCCTGCTCAGACACATGGCTCCTTGAAGTG Gene GeneID:787866|LOC787866:XM_002687469:305_cdna Constitutive 0 NULL GeneID:787866 5 GENE LOC787866 NULL similar to olfactory receptor Olr1012 EMBV3_37409 TGAGCATGCGAATGAAGATGTGGAAAGGATGTTACTAGGAAACAAGTGTGATATGGACGA Gene GeneID:783373|RAB10:NM_001101288:267_cdna UTR3_Alt 2 NULL GeneID:783373 11 GENE RAB10 NULL RAB10, member RAS oncogene family EMBV3_14668 GGGCCTCTGTCCAGCAGCTAAAAATAGAGAGGGCCCAGGTCTGAACTTCTTCACATGCTT Gene BVT0102_403108 + 1 EMBV3_17241 GK000013.2:28314600-28415155 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38176 TTCAATTATCTTCAATCATGCTATACAGAAACAATCAAACTAGCTCATATACACACACTG Gene BVT0101_082425 + 0 NULL GK000002.2:91887416-91899068 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102981 TCONS_00102970 TCONS_00102971 TCONS_00102973 TCONS_00102979 TCONS_00102972 1 XLOC_061986 Coding TCONS_00102973 XLOC_061986 Coding Coding NBEAL1 2:91732599-91894088 j TSS76566 15526 1 TCONS_00102973_11 2672 0.0416720340074713 57 0.904209600713366 2.94637364349064e-05 3.01504335499329e-05 7.53362762006021e-36 3.12124857163298e-06 1.08113021023139e-08 8.61110815766483e-09 4.67198055977925e-13 2.09402541367055e-14 3.78285992778898e-05 4.82252771853903e-05 9.71270465838849e-06 3.26374849798498e-08 1.41394374150569e-05 3.17815759762411e-06 3.78631543872689e-19 0.00156625674041438 0.00164780357461767 7.06402362257279e-08 3.76105987793513e-06 1.13006066818846e-05 4.63154463239028e-11 0.000736847065229673 0.000677162966997359 0.000686479704262494 3.14643959940195e-05 4.3039772617471e-15 1.43732772730187e-05 1.51428927189867e-10 1.98382473109287e-05 1.981574370386e-15 XM_005202695.1 NBEAL1 PREDICTED: Bos taurus neurobeachin-like 1 (NBEAL1), transcript 0.0 1.355e+04 100.00 0.483769161406673 XM_005246787.1 NBEAL1 PREDICTED: Homo sapiens neurobeachin-like 1 (NBEAL1), transcript 0.0 1.124e+04 91.53 0.508952724462192 TCONS_00102973_11 sp|Q6ZS30|NBEL1_HUMAN NBEL1_HUMAN Neurobeachin-like protein 1; 0.0 5144 92.06 0.999625748502994 0 coding 1 0 0 0 -0.167862518908747 0.266717408552219 -0.0448270412308995 0.440946571420123 CTCCGTCTCCCGCCCGCCTGCCTAGCAGCGGGGTGACACGGGGCTTTGGCTTGAGAAGGGGGCGAGGGAAGCGAGTTAGACGTCGGCTTGGCGGCAGCGGCGGCGGCACAACCCCCCAATATTTTTATAATTATCCAACGACCACTGATGAAGATAGGTTGGAGTAACTGCTGAAACTGAATTTTGTTGACCAGAAGGCAGTCCATTTGTTCCACTTCTTTTTGTTTTCCTTACTGCTTTGAGCTTTACTGTAACGGCTGAAAAACTTGGAAAATAAAATGAACACTCTATGGTCTTGAACTTTTTTTTTTTTTTGGAGGAAAAATTAAAGTGCCAGAGTGAAAGCCAGAATGGCATCTAGAGAGAGACTCTTTGAACTTTGGATGCTTTATTGTTCAAAGAAAGATCCAGATTACCTGAAGCTGTGGTTGGACAGTTTTGTTTCTAGCTATGAACAATTCTTAGATGTTGACTTTGAAAAGCTGCCTACCAGGGTGGATGATGTGCCTCCTGGAATATCTCTGCTTCCTGATAATATTCTGCAGGTTCTGAGGATCCAGCTTCTACAGTGTGTTCAGAAAATGGCTGATGGGTTAGAGGAAGAACAGCAAGCCTTGTCAATTTTGCTTGTCAAGTTCTTCATTATTCTTTGCAGAAATCTATCTAATGTAGAAGAAATTGGGACCTGCTCATATATCAACCATGTTATCACTATGACAACACTCTATATTCAGCAATTAAAAAGCAAAAAAAAAGAGAAGGAATTGGCAGATCAGACATCTATTGAAGAATTTGTGATCCATGCATTGGCATTTTGCGAAAGTTTATATGATCCATATCGGAATTGGAGGCAACGAATTTCAGGACGAATCTTTAGTACTGTGGAAAAGAGCAGACAGAAATATAAACCAGCTTCTCTCACAGTGGAGTTCGTCCCTTTCTTTTATCAGTGTTTTCAAGAAAGTGAACATCTCAAGGAGAGTCTTAAGTGTTGCTTATTGCATCTCTTTGGAGCCATAGTAGCTGGTGGGCAGAAGAATGCTTTGCAAGCAATTTCTCCAGCCACCATGGAAGTTCTTATGAGAGTTTTGGCTGACTGTGATTCTTGGGAGGATGGAAATCCTGAAGAAGTGGGTAGGAAGGTAGAACTTACTCTGAAGTGCCTTACAGAAGTAGTGCATATCCTTCTCACTAGTAGCTCCGATCAGCGTCAGGTGGAAACCAGCACTATTCTGGAGAACTATTTTAAATTGCTAAATTCAGATCATTCAGCTTTACCTAATCAAAGGAGGTCCAGACAGTGGGAAAACCGGTTCATAGCTCTTCAGATCAAAATGCTGAATACCATCACAGCCATGTTAGACTGCACAGATAGACCTGTTCTTCAGGCTATTTTTCTTAACAGTAACTGCTTTGAACATCTCATACGACTGCTACAGAACTGCAAGGTGTTTCAGGGACAGTTGGACTATTTGGCTGTATCAGCTATTCAGGCTTTGACAGCAGTAATGAACAAATCTCCAGCTGCTAAGGAAGTATTTAAAGAACGAATTGGTTATACACATATGTTTGAAGTATTAAAATCACTGGGTCAGCCACCACTGGAGCTACTTAAAGAACTTATGAATATGGCTGTAGAGGGTGACCACACTTCAGTGGGTATTTTGGGCATTAGTAATGTCCAGCCTCTCTTGCTTCTTATCCAGTGGCTTCCAGAGCTAGAATCCCATGACCTGCAAGTCTTCATCTCAGATTGGCTGAAAAAAATTTGTTGTATTAACAGGCAGAGTCGAACTACTTGTGTCAACGCAAACATGGGAATTAGAATCATCGAAGCCCTTAATTCCCATTCTTGCCTCCATCGAACTTGTGCTGAGAACTTGATCGCTCTCCATGGTTCCTTGGGGAGTCAGTCAGTGAGCTCAGAAGAAATCCGCCAACTACTAAGATTGCTAAGAGTGGATGAATCTGAATCTGTTCACCCCTATACCACTCCTGTAACTCGAGCAATCCTGACAATGGCCCGAAAACAAAGTCTAGAGAGTGCTCTTCAGTATTTTAATTTGTCACATAGTATGGCAGGAATTTCTGTGCCTTCCATACAGAAATGGCCAGGGTCTGCCTTTTCTTTCAATGCTTGGTTTTGCTTAGATCAGGATCAGTTGACTCTTGGCAACGCTAACAAAGGAGGAAAAAGAAAACAATTATACAGCTTTTTTACAGGAAGTGGTATGGGTTTTGAAGCTTTTATTACCCATTCAGGTATGTTGGTTGTGGCAGTGTGCACGAAAAGAGAATATGCGACAGTTATGCTTCCTGACCACAGTTTCTGTGATTCCCTCTGGCACAACATAACCATTGTTCACATGCCTGGAAAAAGGCCCTTTGGTCAGAGCCTTGTGTATATCTATGACAATGGACAGCAGAAGGTCTCTGCCCCGCTGAGATTTCCTGCCATGAATGAACCTTTTATTTCTTGCTGCATTGGTTCGGCTGGGCAAAGAACCACCACTCCTCCACCATCCCAAATCCCAGATCCACCTTTTTCTTCTCCTATTACTCCTCATCGGACATCATTTGGTGGAATTTTGTCTTCAGCCTCCTGGGGAGGGACAACTGAAAAATCAAAATTGATTACCAAATTGATATCGGCTGGAACCCAAGACAGTGAATGGGGATGCCCCACATCTCTGGAGGGTCAGCTGGGGTCTGTTATCATCTTCTATGAAGCACTGCAGCCTCCTCAGGTGAAGGCATTATATTTAGCAGGTCCAAACTGTTTAAGCCCTTGGAAATTTCAAGAGTCTGACATGGCTGACCTACCTGGTAACGTCCTTCTTCACTACACTGCAAAGGCCTGCAAAAATGCGATCTGTCTTGATTTATCTACTAATTGTTTCCATGGAAGGTTAACAGGAAACAAAGTAGTAAACTGGGACATTAAGGATGTTATAAATTGCATAGGTGGATTAAATGTACTCTTTCCTCTATTGGAACAAATCAGCCACTTTGGTGAAGGACAGATTCCTGAAGGATTGAATGAAAGCACAGTTTCTGAGTTGATAACACCTGTAGAAGGAGATTGGGTGGTATTGACCTCCACAAAGGCATCAGAGTCAAGACTCGAGAGAAATTTAATTGCAACATTTATCTTGATTGTGAAACACTTTATTCAAAGACATCCTATTAACCAGGACAACCTTATTCACTCCCATGGAGTTGCTGTTCTTGGAGCCTTACTTCAGAAGGTGCCTAGTGCTTTGATGGATGTTAATGTATTGATGGCAATTCAGTTACTCATTGAACAGGTATCATTAGAGAAAAATATGCAGCTCCTGCAACAAATGTATCAGTATTTACTCTTTGACTTCCATATTTGGAACCGTGGAGATTTTCCCTTTCGAATTGGTCACATACAGTATCTTTCTACCATCATCAAAGACAGCAGGAGAGTTTTCCGAAAGAAGTATGGTGTACAATTTCTCCTGGATACACTTAGGATTTATTATGGGAATGATTGTAAATATAATGAGCTGTCTCCCGATGATATTCGAACAATAAGGACTTCTTTGTATGGACTAATTAAATATTTTCTGAGCAAAGGCGGAACTCATGAAGAGATACAAAGTATTATGGGTTACATAGCTGCTATCAATGAAGAAGAACAGCTTCTTGGAATTTTGGACATACTCTTCAGTCTTCTACGTACCAGCCCAAATAGAGGTCAGCTTTTCTTACTGCTGTTTGAACCTGGAAATGCTGACATACTTTATGCCTTACTCTTAAATCAGAAGTACTCTGACAAACTAAGAGAAATCATTTTTAAGGTTATGGAACAGATGTTGAAATGCACAAATGTTTATGAACGAAGTAAACAACGTATTCGACTCAGAGAAGTTGGCTACTCAGGATTTGGACTCCTTCTTAATGAAGCACCTGTTAATACTTCTCTCATTAAAAGTCTCACCAATCAAATTATAAATACAGATCCTGCTATTAATTTCAAAGATCTGTTATCTGTGGTATATATATCTCACAGAGCCTATATAAATGTCAGGGTGGTCATCTGCAGAAAGATGCTACAGATTTTGCAGTCCCAGCCAGATGCAGCACATCAGATATCTCAACAAGTGGGCTGGCAAGACACCTTAGTTAAGCTTTTTTTAAAAGCAAATTTTGAAAATGGAAATACTCTTCATAAGCACAATAGGGCTATTATAGTGAAAGACAATGATAAAAATATATCAGTGGAAGATATGAAGAGGAGCTTTGACGAAAAGACAGATGAAGAAAAAATTGCCTCTTTTGCCTCAGCTCATGTATCTTCAGATGAGTGGAGTTTGGAGGATAGACATTCTCTAGACTCAAACATGCCATTATTTCAAGAAGATAGCTCGATGGGAGAATTATCTTTCAAATCAGAGAATCAAGAAGAATTCTGGCATAATAACCCTTCACCTCTGAGTTTAGATCTCAGTGGAATTGATTCATGTGAACTGAGTGATGGTGGAAGTCAAATGCCAGACAGCCTGCCTAGCACTCCTTCCCCAGTAGAGTCCATGAAGCCATTTCCTGTACAGCCTGACAAAGAAAGCAGCGTCACAAATGATGTGGGTTTTAGTGATGACTTCTCTTTACTTGAAAACAAAGAGAGATGTGAGGAGGAGCTTATTCAGTTACTGACCAATATTTTGAGCTGTATAATGTGTAAGGGACTGGAAAAGTCTGATGATGATACTTGGATTGAACGGGGACAAGTGTTTTCAGCACTAACTAAACCAGGAATATCCAGTGAGCTACTTCGACCATCAGATGAAATAAAACTAGTTTTGCTACAGAAGATGTTAGAATGGGCCGTCACAGAAAACAGAGAAGCAAAAATGAATCCAGTAACTGCTGAAAATGCTTTCCGACTCACACTGATCATACAGGACTTCCTGCAATCAGAGGGACTAGTCAATTCGAACATGTGGACTGAGAAGCTTTTAGAGGATTTGATGCTGCTCTTCGACAGTCTGTCAGTTTGGTATTCTGAAAGTCCAGTAGGGGTGAAACTCTCTCAGATTCAAATCCAATTGCTGCTTGGCTTCATTGGAAAGGGTAATTTGCAGGTTTGTGCAATGGCATCTGCTAAACTAAATACCCTTCTTCAGACCAAAGTGATTGAAAATCAGGATGAAGCATGTTACATTTTAGGGAAGCTGGAACATGTTCTAAGTCAGTCAATCAAGGAACAGACTGAAATATATTCATTTCTGATTCCCCTTGTCCGTACCCTAGTTTCTAAAATTTATGAACTTCTCTTCATGAACTTGCATCTGCCTTCTTTACCTTTGACTAATGGTAGCGCTTCATTTTTTGAAGATTTTCAAGAATATTGCAGTTCAAATGAATGGCAAGTTTACATTGAAAAATATATTGTACCTTATATGAAGAAATATGAAACCCATACGTTTTATGATAGTCATGAGAGCATGGCACTTTATTGGAAGGATTGTTATGAAGCCTTAATGGTGAATATGCATAAGCGAGACCGGGACGGGGGAGAAAGCAAGCTCAAGTTTCAGGAGTTTTTTGTGGAGCCATTTAATCGAAAAGTACGCCAGGAGAACTTGAGGTATAATAACATGCTGAAACAACTTAGCAGTCAGCAGTTAGCCACTCTGAGACGCTGGAAGGCAGTGAAGCTTTATCTTACATGTGAAAGGGGACCTTGGGCAAAAAGGCAACAAAATCCAATTCACTGGAAACTAGCTAATGTAGAAAATTATTCCCGCATGAGACTTAAATTGGTGCCAAATTATAATTTCAAAACCCACGAAGAAGCTAGTGCTTTGCGAGATAATCTAGGTATCCAACACTCACAGCCTTCCAGTGATTCATTGCTTCTGGAAGTGGTGAAACAAGTAAAAGTTAGTGATATGGAGGAGGATAAATTAGATCTTCCTGAAGAGGAAATAACATCCAGAGTAAATATTGATGAGAAAGAAGAACAGAATCAAAAAGAAAAATTGGTGTTATCAGAAGACTGTGAACTCATTACAATAATTGATGTAATTCCTGGCAGATTAGAAATCACTACTCAACACATTTACTTCTATGATGGCAGCATTGAAAAAGAAGATGGAGTAGGCTTTGATTTCAAGTGGCCTCACTCTCAAGTTCGAGAGATTCACCTACGACGGTACAATTTAAGGAGGTCAGCCCTTGAGATTTTTCATGTTGACCAATCCAACTACTTTCTCAATTTCAAAAAAGAGGTTAGGAACAAAGTATATAGCAGACTGTTGTCACTTCATTCTCCAAATAGTTATGGAACCAGATCACCACAGGAGTTATTCAAAGCATCAGGACTGACACAGAAATGGGTAAACAGAGAGATATCAAATTTTGACTACCTCATTCAGTTAAATACAATGGCAGGACGAACCTATAATGACCTTGCACAGTATCCTGTGTTCCCCTGGATTTTACAAGATTATACTTCAGAAGAGTTGGATCTTAATAACCCATCTGTATTTCGAGATCTATCCAAACCAATTGGGGTAGTTAATGATAAGAATGCCAAAGCCACGAGAGAAAAATATGAAAATTTTGAGGATCCTATGGGAACTATTGACAAATTTCATTATGGTACTCACTATTCAAATTCTGCTGGAGTTATGCACTATCTTATTCGTACAGAACCATTCACCACCCTCCACATCCAGCTTCAGAGTGGAAGGTTCGACTGTGCTGATCGACAGTTCCATTCCATCCCTGCTACCTGGCAGGCTCTCATGGACAATCCATATGATGTGAAGGAACTTATTCCTGAATTCTTCTATTTCCCAGAGTTTTTGGAAAATCAAAATCAATTTAACTTGGGTCGTCTACAAGTTTCCAAAGAACTAGTAAATGATGTCGTTCTCCCCAAATGGGCTAAGTCTGCTGAAGATTTCATCTGTAAACATAGGAAAGCTCTGGAGTCCGAATATGTTTCTGCTCATCTTCATGAATGGATAGATCTGATTTTTGGCTATAAACAGAGGGGGCCGGCTGCAGTGGAGGCACTCAATGTTTTCTATTACTGTAGTTACGAAGGAGCTGTGGATCTGGATGCCTTAACAGATGAGAAGGAAAGAAAAGCCTTAGAAGGGATGATTAACAATTTTGGGCAAACACCTTGTCAACTGTTAAAGGAACCACACCCTTCTAGATTATCAGCAGAGGAAGCAGTGCAGAAGCAAGCCAAAACAGACACTTCAACCTTTAACCTATTTCAACACCTCCCTGAACTCAAGTCATTTTTTATAGAGGGAATTAGTGACGGTATTCCGTTAGTAAAGGCAATTGTTCCCAAAAATCAGTCTCGTTCTTTTATGTCACAAGGAAGTCCTGAGTTACTGATAACATTAAGCATGAATCATATTATTGGAACCCATGGGTGGCTGCCTTACGACAGAAACATTTCTAATTACTTTACATTCATCAGGGATCAAACTGTGACAAATCCTAAAACTCAGCGTAGTATGAATGGCCCTTTTGCTCCAGGGCTGGAGATCACTTCTAAGCTATTTATAGTATCACATGATGCGAAGTTGCTTTTTAGTGCTGGACACTGGGATAATAGCATTCAAGTGATGTCACTTACAAAAGGCAAACTTATTTCACACAATATCAGACATATGGATATTGTGACTTGTTTAGCTACAGATTACTGTGGAATACATTTGATTTCTGGTTCCAGAGATACTACATGTATGATATGGCAGATTACCCAACAGGGAGGTGTTCCCATGGGCCTAGCATCTAAACCCTTTCAGATTCTGTATGGACACACTGATGAGGTGTTGAGTGTCGCCATCAGCACTGAGCTAGACATGGCAGTATCAGGATCAAGGGATGGCACTGTGATTATACATACCATTCCCAATTTGGCTATATCTTGGGAAGGACATATTGTCATGTACTCCAGCATTGAAGAAAGTACCTCTCTCAAGGATAAGAATGCATTGCATTTGTTTTCTGTAAATGGCAAGTATCTAGGGTCTCAAGTCCTGAAGGAACAAGTATCAGATATATGTATAATTGGAGAGCACATTGTCACAGGCAGCTTACAAGGATTCCTGTCCATAAGAGATCTCCACAGTTTGAATCTCTGCATCAGCCCATTAGCCATGCGATCGCCTATCCACTGTGTTTGTGTAACCAAAGAATATAGCCATATTCTTGTAGGATTAGAAGACGGCAAATTGATTGTAGTGGGTGTTGGCAGGCCAGCTGAGATGCGCTCAGGTCAGCTTTCTCGAAAATTGTGGGGATCTAGCAAACGGCTCAGCCAGATCTCAGCTGGAGAAACTGAATATAATACTCAAGATTCCAAGTGATTGTTATTTCTACCTTCTGTCATGGATAACTGAAATTTGATTTATCACTTTGTCACTTTAACCACATCTCTCAACTATCTCAAATGCTTCAGGTCTGTTATCCCTGAAAACCATTCAGGATTTACCAAAATTTGGTTTATCTTATTAACTAATTCCTAGTCTGTACTAAGATGAATTTGAGAAAAGACATTTGATTAGATTTAGTGGTTTATTCCTAAGGATAATTAGATCTTTTTTAAAAGATAAACTTCTAAAAATGAAGAAGTTAGATTCAACTCACTTATTATAAATAGCAAAAGTTGTATTTCTAATAAAAGAGTAGATAGAGATAATGGGACAGTTGAGAGATATGGCTTTTAATACTTTCTTTAGTTAATCATTCTATTTACTGACCACCATATTTAAAAATACGATTTATTTATGGAACTTCTGATCAGAGGTAATATTTGAAAAGCATCCGTTGCATACTTGTATTTTTGAAACTGGTACATTGGCACATCCCACTACTACTTAGCATATTACTAATGAGAATTTATTGCAACATATTATCATCCTTAAATAATAAAGTTTGAGTAGGAATAAAAGAAACTAGAGATACATTTTACAGATATATTTCACTAGTAGTATAGTTAAGGAAAAATGCTAATTATGATTTTGACATTTGGGTCCTGTATAGCATTTGCAGCTCAATTTATATATGCAGAGTACAAAATTTCTTGGCTTTTTCTTTATTAAACACTGTGTTTTCCCTCAATAATTTTTGGAGTTAGAAATGATACCCAAATAATTATGTTTTTACTTATTTCATATGATTGATGAACTGAAAAGATATGCATAACTTAAACTAGTCATTTAGATATAGTAATTTTTAAAAATACACATTTCTGTTTCATGTTATGTATAATTTAGGATTACAATTAATTTTATTATACATAGCTAGATGTTACATTATGCTTTGCTATTCAAGATTTTAAAGTACTGATAGATTTATTTTAGAATTCAAAGAGATTGTTAAACCTTCTACTTTTGTAAGGTCATGTTTTGAGTAAGGTCAGAAAGCTTTTACAACTATTTGAGTGTCCTTAATCTGAGATTCCACAGGTTTGGTGAGGAAATTCTGTTTGTTAGCTGCTTTTTTTTTTTCCTAAGAGTGGGTGGTTGAGTGGCTTTCTAAACGGGGTCTGTGAAAAAAGAGGAGAAAAAGACTTTTTACAATGATACCTTTTAAAATAATAATATTTTTTTTATTCCACAAACTATAGAATTCCTTTTATCCAGTTGTCTTCTCAGTTGAATCTTTGAAGAATTTCCCCTTTGCAGTCCTCTCCTGTTGCCTGTTGCCCACAGTTGTCTACTACCCTTTTCTTTATAATCCTATGAGAGAGTAAAAAATACATGAGAAGTGAAGGATTCTATAATAGGGAAACTATTTGATAGATTTGATCGGCTTGTATAAGAACTAGCAAAAAGTTGTAGACGAATATTCTTTCCAGTCATTTAAAATCCTCTCTTTTATCAGTAAAAAACTTCTGTTTAGGTGAATCACACTGACATAAACTGATGCAGCATAAAGTAGAACATCCGTAAATGTGAAGGTTTCCTTTTTTGAGGACTTCAGTAATTTGTGGTAAAAATGCCTCAAAACAAGTCAGTAGAGATGATTATGATATATTAAGATTAATTTCTTCTATTAGTTTTTTCATTCTTATAAAATATTTCATTCTTATAAAATATTCATCAATATTTTCATTTTTCATCTTATAAAATGTAGGTTACCCTCCAAAAGCTATTTTGTAGGTTTGAAGTCAAGAGAATCAAAATGATTGATTTTTGGTATTTTAAATGTTGAAGTTTTAAAAAAAATGTTTCTAAATCAAAACTTTGGAAATGTTTCTTTTGCCTATTTTAATCTAGGGATTTTGGTATAAGGATGCCTTTTTTATTTTTAAGGTTATTTAATACTGGTTTTGGAAGTTATTGGCTTTGGAAGTTACAGAAAAGTTTAACTTAGATTATTAGAGGGAAATTCCTAAATTTTTGGTACTTTGCTACTGTTTAGATGGAGTAACTAAAGAAGCAGGGTACATTTTATAGCACAAACATGAAGAAGCTTTGTTCACAGTAGATCTTCTATTTAGAACAATAGTAGATGTTCAGAGCACTAGAATTCATCCTTACATTTTCCAAAAAGTGAAAACCAAAATCTCAAAATTTTGAGAAAAGTCTTTGAGAATACTAGCAACAGTCTAGAAGAATGGAACTTAAAGTTTATTAAATAAGCAAATATAGTAGTAGCTTTGGCTGAATAGGGCTTCCCTGGTGGCTCAGCTGGTAAAGAATCTGCCTGCAATGCGTGAGACCCGGATTTGATTCCTGGGTTGGGAAGATCCCCTCGAGAAGGGAAAGGATACTTATTCCAGTATTCTGGCCTGGAGAATTCCATGGACTGTTCAGTCCATGGGGTCGCAAAGAGTCCGACATGACTGAGCGACTTTCACTTTTGGCTGAGTAGTTCCTCTTTTAAACAGTGTAGACCACTGAATTAAAAATTGCTAGGTAAAATCACTGAAAAGATATACTTTGAGGGATTCTGGTGTATTTAGATGTTATCCATACAAATTAGTTTTGTATTGTATATGGGAGAGATGAATAGGATCATTAGTGGAGTAACAGGTGGACATTTTAGACGATGAATATAATATCTCAACTTAGCTCTTGTATGAAATGTGTTGTCTTTGAAGAACTTTTCTTCTGCTTTTGTTTCTTGACACAAATAAAATCTTTGCATCCTGATGATGCGGAGTGATTTATAGTAAGGGTCAAGTATTAAAACATATAATACAGGTACTACTCATTTAGAGAAAAAAGAAGCTTTGTAAGATTTTTTCAACTCCTCCCAAACAGTATTCTTTCATTACTTAGATAAAGTTGGAGGAGAGAAGGGAAAAATAGAGCAGGGCATGAATGAGCTTGACCAGTTGTTTTAAAGTCTTTTTTTTTTTTTTTCCCCCACCCCTTTCCCTGTTTTAAAGTCTTATAAGCCTGTGAAGCTCATGTCATTTATGAATCCATTTCTATTAATTTCCTTTAGTCACAGTGCTTTTTCAGGTCACATCCTTTTGTAGACAAGAAAATGTCAAGTATTTATTTGTCATTAACAAAGAACAACAGTGAGGCTTCCTTTTTTCTCTGTGTTAAGGTGTATAAAAATTATCCTTTAAGAACTAGTATTGAAAAGCACTTTTAACCTTCTGAAGGAGGAAACGTGCCCTCATAATTAATCAGAATTTAGATTTGAAAGTTGAATCTTAATCAAAGCTTAAATAGAAGTAGATAGAGGAAATTAACTTGAATACCCTATTTTTATTTAATGATGACACCATGACATGGCCTTTGCCTTTAAGTATATTAAGTATCTTGTTATTATTAAAAGAATCACTAATGGAAATCTCTTAATTGAATTTAAAGAGCTAACGTTCCTTTTATATATTTATTTTTATAAAGTGAATAGCATTGTCTTTATCACCTTTCCAATGAAAAGATGCAAGTACATGGACTATTTTAGATGTAAATATTACATAAATATTAAACAATATCATGTAACATGTAATATCATGTGTGGGTATATATATATGAAGGTTGGTCTCTTCAAATACATCATTAAATATGTCATCCATAAATAAATTCTTAAACCTGTCTTTAGGATATAGTTTTTGACTGAGTAAGAAATGAAATACATTCTTTTTTATTCCTAAATCTAATCTGTTGTTATCAGGCAGACTCATAGCTTGTCCTAACTCCCATTTCTCTGATCAACTAAAACTGTCCTTTCCCAGTAAGTGACTAGTCTTAAACATTTTTATCACTCTAAGCAAATATTGTTCTCAGTATTCTTTTAGCTTTATTTATTTATCATGCATACATTTGATTTGCTTTTAAACTTGATCATCCAGAACATTGTTCTAGAGAGTTTTCCCATGTGAGAGTCCTTGTCATCATTTCAGTATTATTGAAATGACAGTCATCATTTCAATATTATTAAAATATGGGCCACAGCTTTATTTAATTTGAATCTAGCATTTTTCAAGGCCATTGTTTCTTAACTGAGATTACAGGTAGACTTCTCTGTGAAGTTTTATAAATATACAGAAGTTTAGGCACTACTCTGGATATTTTGAACCTCTTTACTTGATATTCTTGGTATAAAAAAACTATGTCTCAGGGTTATTAAATCAAAATATTTTCTGCTATAGCAATTATATCCATTCATTTTTTATAAATCATATCTGGTATTCACAGGCTTATTTGAAATAGGTGTGATCATTATCCTTGAAGACATTTGTTTCTAAAATTTGCTTGGAATGGCTTTCTTATCTTTGTTTTGCATGCCACAGTAACAACTAAATTTCCTTTTCAGTTTGCATTATTCTTATCATAAACTCTCTTCAGACCTTTCATATTTGAAAATTGTGACTAATATCTGTCTCCAGAAAAGTGTTTGCTTGTATTAGTTCCTAGTGACTATCAGTGAATATTTTGCATATCTGAATTAGGTAATATTTTTAAGTGTTAATAAAATCATGAGTAACAAAATGCTAGATTTAAAACATTGATTTAGATCTCTTAAAGCTTTGAAGCTACTAATCAATAGTTTTCCTAATTAAAAGCATTGACTTAAATTCCCTAAGCACTTCTGAGGACTTTTGTAGGTGTAGCCTCTGTATGGAAGTACTTCTTAATTTTTCGTATGAAAAGTCCTAGTATTAAGAAAAAATAGAGCATTAACATTTAAGATATTTAAGCCTGTATTGAGAACAATCAATTTTATGCATTCAAAACATAGGGCCATCTTAGATTATAGAAATTATGATTTTCATCAGTATAAGAAAGTATGTAAAAGTGGCTATCTTACCAAGTACTTTTCTGATATATTGTAGTTAATTCATCAAATACATCTTCTTAGATTATCTCACTGACATTTGTCACATGTGGATGATTTTTAAAGACACTGTAGGATTTGGACCTATAAAGCTAATGGCTTTAGTGAAAAAAGGACAGAGATAAAGTTGTATTTACTTTTGTCTTAATGCCTTTAATCTTATGAATTGAAAATTCAAAGGAAAAGAACAAGTAGAAAGTCACTTGGTCAACATTTGTTTTCCTTGATTTAATTTTACTGTTTCCTTGGAAACTTATTTTGCAAATATTACCATAATAATAATACCACAATATTATCATTGAAAAGGTTACCAATTCTTTTTTTTTAAATTCCCATTCATTTTTCAAAGTTGACTGCTAGTGGACTCGGTATTTGTGTGTGTGTGTGTTTTCACTTAAAATGGCTGTCTCATTATTTAAAATTTATAACTATTTTTGAGTGTACAAACTGATTAGCTATTTATAATACTATTACAGTACAGCATTGTAATTTGAGAAAGAAAACAAGTTAGGATTTAGGTGGGATTGAAAAATAAAATTATATTTTATTGATTAAAATATAAACTTTTTAAAAAGTCTTATTCCAATGGACCTTTTAAAATTTATTTTTGTAATAATATATTGTACTTAATGTGTATTAAATTAGAGGCTTTCTGGTAGCCAGTATTCCAAATAAATAGTTAATATTCAAATGCTATTTTTGTTGTTCCTTATCTTAGAAACATTTTCCCATAATATCTAAGCAATGTGTTTTAATATTTACTGGACTCAATCTACAGATTCAACAAATATTCCTCTTGCATTTTGGAGGAAAAAAAGCTTATCTATGATAACATATTTTTCTCTTTAGAATACTAAAATTATATTAATCAATAAACAATTTAGAGAGTAGTTCTGGTAAGACAATGTCAGGTGTCAGACTTAATTGAAAAAATTTCAGCCCCTTAGTTTCTTATATAGCTATTAAAGGGAATAATTTTATTCCTTTGGGATTTCAACTTTTTCATGGATAATTTTCAAAATATTTAATTACAATAGTTTCTACATTTCTTCCAAAATTATTACATATTTCAGTACATCTTACTGTTAAAGATCTTTTATACTTTTTATTTTTTTTTCCTATTGTACTTTTTACTGGTCTCTCCAATTCTTAAATACCATCACCAAAAAGTTTTTGTGGCTACTGTTTTACAGTTAGCTTTACAGAAAACCATATGGCTGGTTTGTTCTCTTCAGAAATTCCTAGTGGGTATTGCTTTCCTTTCCCCAACTGTTTGCTTTTATATGGATTTGTAGCAAAAATATGAGTAAACAATAATCATCTAACCAGTCATTTTCTGTCTGGTTCATTGTTATAGAAGTGAATTACATTAAGATTGAAAAATACTGAACACATATGATTTGCTTCTTACGTCAATCTTTCTGGGACCCAGATTAAATAGGAGTATTTCAGTGTTATCATAGAGGTGACAGTGATTTGAATGTGTGTGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATACACACACACACACATACAGACAAGGATAGACATAACAACTTCAGAATTACTTGTTTAAAAAAGTACTTGCAAATTGTGTGTGCTCTTAAATATTTAAGGAATTCAAAAAGTTAATGTATTTATCATAAAGTGGTCCTTCTCATTTGTTCTACTGGAATTGACCATTAAAAAGAGAATATTAAGCCTTATTTATATCTGATTATTGACTGCAAACTGTGACTCAATGAATACTTGTATGCCAAAAAAAAAAAAGGTTTTAAAGTTGAGATAGTTTTAGACTTAATAAAGATGTGTAAATAATTTTGATTAGTATTCTCATTATAATGAAGTTACTGTTAATTTGGTGCAATACGTTCTTCCCTTTCTCATCCTTTTAAAATTAAATATATAAGATGTATGTTTTGTTTTGTTACATTGAATGTTTTAAAATTTTTCAGTGTGTGTATATGAGCTAGTTTGATTGTTTCTGTATAGCATGATTGAAGATAATTGAAAAATTTGCACATTTTTTAGTCATTTGGAAATTTGTAGTCTAACAGTTTTTAAGAATATGCATTTATTTTGTAAATAATAAATTAGCTTTGTATATGAAAATGAGTTTGAATCAAATAAAAAAGTAATGTTACTTTCTTCAGCTCATTTGTAATTCTCAATTTATATAGTCTGATT EMBV3_29888 AGTGTGCTGCGGGGTCATCCCAAAGGCTGGAGGTAAACATCAGGAACATGGAGTCTGAAA Gene BVT0102_007668 + 0 NULL GK000019.2:45406319-45411511 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094064 1 XLOC_057350 Coding TCONS_00094064 XLOC_057350 Coding Coding NMT1 19:45375478-45409389 = TSS70441 5160 1 TCONS_00094064_3 496 12 0.848186375700383 1.72879560246052e-05 3.82710934135246e-05 2.93656505413123e-05 1.05320704903019e-05 9.57613373666265e-05 2.03316071460327e-05 6.08575761696668e-05 0.000320084675471269 0.000142471093437407 0.000283637687527249 0.00017097413908226 0.000340634942179532 2.141192629993e-71 1.93355250728363e-05 1.23611409637858e-13 0.00699639559457226 0.00278170322383709 0.00409023145191639 0.000195222933377767 9.00394965375261e-63 4.62523134242535e-12 0.00479525365562022 0.00224726225314804 0.00265911323579433 1.04818378081531e-11 9.77090191240273e-12 9.37830998504072e-05 0.00102164094565549 0.00112509504184935 0.00348146922690467 NM_177504.2 NMT1 Bos taurus N-myristoyltransferase 1 (NMT1), mRNA. 0.0 3696 99.66 0.399612403100775 XM_005257422.1 NMT1 PREDICTED: Homo sapiens N-myristoyltransferase 1 (NMT1), transcript 0.0 4134 79.14 0.960271317829457 TCONS_00094064_3 sp|P30419|NMT1_HUMAN NMT1_HUMAN Glycylpeptide N-tetradecanoyltransferase 1; 0.0 1034 99.40 0.997983870967742 2 coding 0 0 0 0 0.0736537089414042 0.538539856538728 0.037478337041114 0.444701033469479 CTTTCCTCCCGCGCGGCCGAGCTCCCAGAACTTCCGGATAGTGCTGGCTCCCCACCCACGACTGCCTCCTCTCTAGATTTCTGGGTATTGTAGTCCATCTTGTTCCGGTTTCCCGGGAATAACCTGCTCCTAGCTACGGCTACTTTCGCCACAAAAACTACAAAACCCAGAATATCGCGCAAGTTCCCCTTGTCCAATAGGAGCCCCCCATGTAGCGAGGCGCGGAGGCCGGCTCTCGCAACTCAAGATGGCGGACGAGAGTGATACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAATGGAAACGGCCATGAGCACTGCAGCGATTGCGAGAACGAGGAGGACAACAGCTACAACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAAACAAAAAAAGAAGAAAGAGAAAGGCAGCGAGACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGCTATTGAACTTTTTTCAGTGGGTCAGGGACCTGCGAAAACCATGGAAGAGGCTAGCAAACGAAGCTACCAGTTCTGGGACACGCAGCCTGTCCCCAAATTGGGAGAAGTTGTGAACACACATGGTCCTGTGGAGCCTGACAAAGACAACATCCGCCAGGAGCCCTACACGCTGCCCCAGGGCTTCACCTGGGACGCCTTGGACCTGGGGGACCGTGGTGTGCTGAAAGAACTCTACACTCTCCTGAATGAGAACTATGTGGAAGATGATGATAACATGTTCCGGTTTGATTATTCCCCAGAATTTCTTTTGTGGGCTCTCCGGCCGCCTGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGTGGTCTCAAGTCGGAAACTAGTTGGGTTCATCAGCGCCATCCCGGCAAACATCCATATCTACGACACAGAGAAGAAGATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGCTCCAAGAGAGTGGCTCCAGTGCTGATCCGTGAGATAACCCGGCGGGTTCACCTGGAGGGCATCTTCCAAGCTGTTTACACTGCCGGGGTGGTGTTACCAAAGCCTGTCGGCACCTGCAGGTACTGGCATCGGTCCCTAAATCCCCGGAAGCTGATTGAAGTGAAGTTCTCCCACTTGAGCAGAAACATGACCATGCAGCGCACCATGAAGCTGTACCGACTACCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAGAAAAAGGACATTCCAGTAGTGCACCAGCTCCTCAGCCGGTACCTGAAGCAGTTCCACCTCACGCCTGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATTGACACTTTTGTGGTGGAGAATGCAAACGGGGAGGTGACTGATTTCCTGAGCTTTTATACACTTCCGTCCACCATCATGAACCACCCGACCCACAAGAGTCTGAAGGCTGCTTACTCTTTCTACAATGTTCACACTCAGACCCCTCTCCTAGACCTCATGAGCGACGCCCTCGTTCTCGCCAAAATGAAAGGGTTTGACGTGTTCAATGCACTGGATCTCATGGAGAACAAAACCTTCCTGGAGAAGCTCAAGTTCGGCATTGGGGATGGCAACCTACAGTATTACCTGTACAATTGGAAGTGCCCCAGCATGGGGGCAGAGAAGGTTGGGCTGGTGTTACAGTAACCAGTTGCCAGTGAGATTCTGGATAAAGCCACTGAGAATTACCAGGAAATGGAGCCCCACCACTTGTTGGTCCAATTTTCACAAACGTGAGAATCCCTGGCAAGGGGAGCAGAACTGAACCGGCTTTACAGACCGCCGCTGAACTTGATGATTGTATTAATGGCGTAGGCTGCGAGATGCCATCTCTGGCCGTGTCTCTGGTCTCCCTGTTTTCCAATTAATCGCATCGTTATGCAGCCGCGATCAAGGGAATGTAACTGCTGAAAACTAGCTCATGATTGGCATATTATGGAGTTAACGGGTGAATAATAAAAGTATATATATTATATATATATATATAAATATTTTAAATATCTTTCATGTTCCAAATGTACAAGGATGTTTGGTCTCTAATGAAAAACTGAATCCAGATCATTCCTCAAAATTCGACTCTAAGGCCAGTGCCCGACAGACACATATCGGTACAATTGAATTGTTTCCTTCTGAAAGCAGGCATGGACTTTTCTCAGGGGAGCAGGAGAAAGAGGATGTGGGAGGCTTACCCAGTTCCCCTTCTGAGTCAGCTGGGTTTGATTGGCTTGGCAATGGCAGCGTCGGGTGGAGGGGCTGTGCAGGGCTTTGGGGAGGGCTCAGCGCTCTCTGGGAAGAGCAGGTAGAGGCCTGGCTGGAGCAGACCTGACTCTGAGGCGCTCCTGCAGGGGTTGTACCTTTTTTGCATCCTGAACCTGCGCAGCAGGGATGACCTGTGAAAGTGCGTTTCATGAATCCAGTTCCCTCTTCTAGTCCTCTTAGCCTGCTCCCTGTAGGAAGTCATCCTGCCAACAACTGACTTTTACATCCAGGCTCTCTAGCCAACTGTTGCCAATCTTATATGACAGGGATAAGTCCTGTGAGATTGTTTTTCCACTGCCTGGGGTGACTGGCAGTATGAAGGGGACCTTTGACCTCCTTGTATAGCACCTGGGACCTTGTGGAGACTATGTCAGTGCAGGCCCTGCCTAGCTCATCTTAGAGCAAAGAACCAGGACCTGATGCCCCCAGGATTGGTTGGGCAAGGATGGTGTGGGGCTGATACCCAGACCTCAGCCTCCAGCCCTGGGCCGGTGCCTTCCAGCCCATTAGCCGTCTCTGCTCCTTTCCAAGACATACAGCCTGCAGGTCACGGCAGGGAGTGGTGATGAGATGCCAGTCTGCACTTGGCAACAGAAATGATTTCCTGTTGCCATTGTCAGAGTCTGATTTCCACTGATGATGTGTTGTGGATTTTTGCGGTGGTAATGGTGACTGATGCTGCCTATGGCCCTCCAAATAATGGAGGTTCCAGTCACATGACTGTCACGTAGGCATTCCTCAGTTTCGCTCAGCCAAGTGGTTTGGGGAGGGTTGGGCTATGAATTGTCAGCAGCAGCAACTCATATCCAGACTTGTATGTAACTTTTGCTCTAGGACGAGGTCAGTGGGTGGATGGTGTGACGTGTGAGGTAGGGGGTTTCCTGGCTGCTTTTACCTCTACTTGTAGAGGGAAGGAAGTCTTGCCGGCAGGCCAGGCTCAGCCCAGCTGTGGGAACTGAAATCGTGTTCCATGGGCCAGGAGGGCTGTGTTGCAGGCTGTGGGCTCTGGTGAGGTTTGCCAGAGACTGATTGTGCAGAGTCCCCAGAGCTGGAGGGGATCATGTGCTTAGTTGGGATGGGGCCGTGCTGCCCCTGCCCAAGCAGGGCTGCTGGCCAGGCTTTCTGCAGACGGAACCCCCAACTCCATTGATCACACTTTCATCAGAGGCCTCTAGGGGGCCTCCTTTCTCCCCGTCGTCCCTGTGCTGCAAACTGTAGGCCCCCATCGTGGCTGACCTTTGACTCCTTGACTCCAAGATACCCAGACCAAAGAAGCTGCTGTTCTCAGCAAGATGTGCACTGCATTCCACAGACGGCGGAGTCGGAGAGGCAGGGGCTTGCCCACACAGCCTCACAGACATCAGACACATGGCATCCCATGGCCCAGAGCAGCCCACCCTGTGCGTGCTTCTAAAGATGTCAGAGAACAAAGTTCCCGACTCTCCCACCTCAGGCAGGACTGGAACTTGGACAGGCTCCCTGTCACAGGCTTGCTCAGCTCTGGGCCAAGTCCCGGCCTGAGCTGCCTCTGAAATTTGGGGTGCCTGACGGCCCCAGGAGTGAGCTTTGCCTTGGTGACTAAAGTCATGGGATGGAAACTGTGAGGCCCATGCCCGCTCTGGAAGAAAGCGATTGCCTGGGGAGGTCCCAGTGTCTCCCTGCAGTCACTCCTTGGACTCTGCTGTCGCCCTCTGTAGGGACCCTGCCCTGCCTTCAGCACCACCCACAGGTCTGCAGGAGTGGGGTTGTGGCTGCTCTTAGTCTTCTTTTTGCCCAAGCACTCCCTGGGTTCTTCACTCGACCCGTTCCAGGACTTCTGGGCAGAGAGAACCATTGCCTGGGGTTTGGGGCCTTGCAGGATGGTGGAGCCGTGACTGGCTTAAACCAAACAAGGCGAAGAGCCCAGGGCCTCCAAGCTCATCAACTGGGACTTGCCTCAGGCCGCCGCTCACAGTGGGCCTCCCGGGTGTGGCTTCGCCCTCTGCCTCCAGTGCTGGGCTTTCAGACTCCATGTTCCTGATGTTTACCTCCAGCCTTTGGGATGACCCCGCAGCACACTCCCACAGCCTCCTGTCTCTGTATGGAGAGAGCTGGGGAGAAAGGAGGTCTCGGTTCTGGACTGAGGTCTGCACAGGGCTGGTGTCCCCACGCACGCCTGCTTCCGAAGATGCTGCTGTCTCGTTTGAAGACCGGCCTACATCAAGCCACCGCAACACCTAGGTTTATGGAAAATTTCAGGCCTTGCCTGCAACTCCATTCTGACTGCCGTCACCCACTTGCTGACTCACTTGAAGCCTAGGGTGGGTGTCCCAGTGCTCTTGAATTCTTTGCCCAAAGATGACCAGCATTTAACCAACTGAAGGGATGGCCCAAAGGCCTGGATAGCTTCACAGCTTCAGCCCTGGAGAGGGTGGCTGCTGGGCCAGGGGACGGGGCGGGGCGTATCTCTGGCCAGGGCCTTTCCACCCCGGGCTCCCTTCTTCAGGCCTGGCCGCCTGCCCTGGAACCAAAGGAGACGCAGAGCTTCGGGTTATTACTGTCAGGGGAAGGCAGGCCTGCAAACAGACTGTCCCTGGGGAGGCTGTGGGGGAAGATTTCATTCAGATCAGTTCAAAAATACTGATTGACTGCCAACCAGGCGCCCGCATCCAGGAACGGGAAAGGGGAGGCTTCACCTTTGTGTCTTGGCTTTGCTCCGGGCTGTGGGAGGGGCATCCATTTCCGGGATGGGGGAAGAAATACCAAATGCATTGTTGTTCTGCTTGGTACATCTCACTTGTTTCTAATAAAGGAAGCAGCTGAACACAGCC EMBV3_08052 GTGGACCTTGGTTAGTGAGCAGACACAAGTAAATGCTGCCAAGAACAAGACAGGAGCTGC Gene GeneID:786728|LOC786728:XM_002685967:268_cdna Constitutive 0 NULL GeneID:786728 3 GENE LOC786728 NULL similar to ribosomal protein L27a-like EMBV3_42901 CAAACTGACACCTCCATATATGATATACTGAAAACACATCAGTTCTGCAGTATTCCTGCC Gene BVV0101_045808 + 0 NULL GK000008.2:76868170-76964251 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03442 TGCGGGGCCCCTCCCATTCCGTCACCCTACTCATTCAAGTCAATCTTAGTTTCTAACCAA Gene GeneID:317654|SLC9A1:NM_174833:45_cdna Constitutive 0 NULL GeneID:317654 2 GENE SLC9A1 NULL solute carrier family 9 (sodium/hydrogen exchanger), member 1 EMBV3_10342 TCCACATTCCTTGAAAAACCTGGCTCCAATAGCTGTTATCTCTCTAACTCTGCAGACAGC Gene GeneID:100337377|LOC100337377:XM_002688054:4_cdna Constitutive 0 NULL GeneID:100337377 6 GENE LOC100337377 NULL T-cell activation Rho GTPase-activating protein-like EMBV3_02929 TGGGAGCTGTGGGGATAAGGGTCAGCTTTGCAGAGTGTTGCCAAAAATGCTTTTCAGACC Gene BVT0102_221352 + 0 NULL GK000024.2:8100482-8451013 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138513 1 XLOC_084656 NonCoding TCONS_00138513 XLOC_084656 NonCoding NonCoding - 24:8328363-8332003 - TSS103767 918 1 TCONS_00138513_1 45 3 0.748557295960429 0.000237136274708022 0.000164190039206463 0.000685481127814068 0.000298514378205782 0.000895468698114634 5.84486274367978e-05 0.000298573682094806 0.000170740482663352 0.000214741668256496 0 0 0 0 0 5.54093031289939e-06 0 0 0 0.000733891604335196 0.000822549692188031 0.000720903069683238 0 0 0 9.05679817296577e-05 0.000583285895406582 0.000274448970518594 0 0 0 0 noncoding 0 0 0 0 -0.144888486331266 0.338785165831726 0.0341011032959168 0.591330427525779 GCACCCATTTGGGAGCTGTGGGGATAAGGGTCAGCTTTGCAGAGTGTTGCCAAAAATGCTTTTCAGATCGGTCATATTCATCTCTCCAACTCCGGCAGCAGTGGGACATCATTAGTTCCCGATGGTTATTCTCCTTGGCTGTTTCTCACTTTTTCTGCCTCAAAGACAAGACGTGCGTCCAGCTCTTCTTTGACTTCTGAGCATTCACGTCTTTGGCGCTGCCCTAAAAATGGAGTTGTCAGAACAGCAAAGAAACATAGCATCTGACAGAACTGTAGGAGCCAACGTTACTTCATTAACTGAAAAGCTTCTTAAGTTATAAAATTGGGAATCTAAATCCGTTTGAATGAAATTCTCCTCAGGCCAGATAAGAAATATAACTGAGGGCTTACCCTGTTCTTTGATCTATCATTGATCTCTAGATGTCCATATGAAATAAATGATTTTGTTTAAGACTCTAAAAATCACTATTCTTTCAGTTCATGAACTACAGAATTTCTTGTCTTTACAGGTACACTTGTGTTTTAACATAAGCTTTTGTTTTAACTGCTCCCAGAACCCCTCACAGTTACGTTAAGAAAGCTTCTTCTAGCATTTTTATTGTAGAAATCAGCTATGTTCTTGATTGGCTGAATTAAGATTCAGTGTAGTCATATATATTTCAGCTGTCTCACCAGGCAGGTAAAGGTTCAAGAGAAAATAGTCATGGCCACAGTAGAAGAGTATGGACAGGGAAAAAGTCCTGTCTTCTTCTTAATTTAACATCACTGACCTTGAAGATAATTTTCTTGTATGCCTATCTATACCACTTTGTATCTTCATTTAAAAGTTGTCAGTTAAGAGACCCATAAAAGCGAATATATATAGCTGTGTTCCTATTTATATAAAGTTCAAAACAGATAAAATGAATGGTTAAGG TCONS_00139766 r 3' 73849 TCONS_00139766 r 3' 77488 EMBV3_33055 AATTTTGCTTCCCTAAGTGCCAGTTATTCCTCCCACCAATTTCCCTTCTCTTCCTCCTCC Gene BVT0102_205506 - 0 NULL GK000016.2:71609680-72241104 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03560 GAGAGCCTCTCAGATAAAACTTTGGAAAACGAAGTGGTGAACCCAGTATATATGCCAGGA Gene BVT0102_341812 - 1 EMBV3_28795 GK000027.2:5948524-5962939 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17825 TTGGGTTCTTGATTTGACTGGTGCCCCTGCTACAGCCCAAAGCACGTAGTGTTCGCTCAT Gene GeneID:511727|LRRC49:NM_001100343:137_cdna Constitutive 1 NULL GeneID:511727 10 GENE LRRC49 NULL leucine rich repeat containing 49 EMBV3_33983 CTCCTTTGGAGACGGGGTTACTTTTGTGGTTGTCCTGCATCAGGTGTGGAAGAAAGAGCC Gene GeneID:508355|ITIH3:NM_001101898:118_cdna Constitutive 0 NULL GeneID:508355 22 GENE ITIH3 NULL inter-alpha (globulin) inhibitor H3 EMBV3_29666 GCTTTGCTGAGTTGCAAACAACTGTGCATTACAAAGTTAATATGGTAATCATGGTTTGGG Gene GeneID:508918|SCP2:NM_001033990:31_cdna Constitutive 4 NULL GeneID:508918 3 GENE SCP2 MGC127405 SCPX sterol carrier protein 2 EMBV3_26058 ATATAGTATAAAATGCATGAGAAATGAACATACGTGCTTTTGTGCTCACACACAAAAATC Gene BVV0102_194048 + 0 NULL GK000014.2:61521103-62215197 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37256 ACCAGCACAGAGCCCCAGTCCCTGGTATCTCTGCACATGTCCTTGTATTTCACTCACTTA Gene GeneID:510977|LY6E:NM_001046070:56_cdna Constitutive 0 NULL GeneID:510977 14 GENE LY6E MGC140297 lymphocyte antigen 6 complex, locus E EMBV3_21004 CTGCTAGCTCTGTAGTCCTTTCTCGTCTCACTACCACATACAGCAATGACCCTGTTTGAG Gene BVV0102_167646 + 0 NULL GK000012.2:15387137-15518991 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39551 GACCGCTTCTATAACAACCATGCATTCAAGGAATCTCCTGAAGAAGACAAGGACATGGAA Variant GeneID:616974|SPA17:NM_001076440:44_cdna 310^384 1 EMBV3_13923 GeneID:616974 29 GENE SPA17 NULL sperm autoantigenic protein 17 EMBV3_33187 GTTCTCCAGTCAGCCCTGGGGGAGAGGTCATCCGATCATTACAGAAGTGAGGGCTTATAA Gene BVV0102_218951 + 0 NULL GK000002.2:122783831-122784557 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106521 TCONS_00106525 TCONS_00106524 TCONS_00106522 TCONS_00106523 1 XLOC_062827 Coding TCONS_00106525 XLOC_062827 Coding Coding ZCCHC17 2:122784130-122889680 j TSS78391 2027 1 TCONS_00106525_1 241 8 0.980871443594918 0.00086877234517168 0.000510359920394964 0.000636905976613934 0.000564263531970808 5.03293998772314e-05 0.000993104222524495 8.03270884175139e-09 0.00136148222077879 0.000128171976901355 0.000440185786920569 2.53724703231526e-09 2.01284351786934e-09 5.77867270618639e-05 4.14175468724656e-08 1.25964978477879e-09 0.00291567409409906 0.00151270431098299 0.00158040896701189 0.000891709960507205 0.0010056867486129 0.00110140829345405 0.00127618179505568 1.14577907732452e-08 0.00261526844930767 5.3180722603298e-05 0.000226625796870005 5.86018038518873e-05 5.48088976526854e-08 0.000145749452243065 0.000499837834152585 XM_005202977.1 ZCCHC17 PREDICTED: Bos taurus zinc finger, CCHC domain containing 17 (ZCCHC17), transcript variant X1, mRNA. 0.0 2928 100.00 0.80019733596448 NM_016505.3 ZCCHC17 Homo sapiens zinc finger, CCHC domain containing 17 (ZCCHC17), 0.0 1905 86.24 0.801677355698076 TCONS_00106525_1 sp|Q9NP64|NO40_HUMAN NO40_HUMAN Nucleolar protein of 40 kDa; 3e-176 489 99.17 0.995850622406639 1 coding 1 0 1 1 -2.21460525578129 0.0442534043579859 0.000529360414646823 0.993014258710267 GTCCCGCCTAGGCGCGCTGTGTCTTGTGGGTGGACGCTCACTGACTGGGTTTTGGTGTTTCGCGCAATGCTGCGAGGGGAAGACCAGAAGCTGACAACGAAACACTTCAATTAGCTTTAGCAGAAGAGAAATGGAGGAACCATAGAGCATTAAGGATGAATTCAGGAAGACCGGAGACCATGGAGAACTTGCCTGCTCTCTATACTATTTTCCAAGGAGAGGTTGCTATGGTCACGGACTATGGAGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCACATGTCATCCTGTCGCGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGACAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGGATAAAAGTATCCCTCTCCATGAAGGTTGTCAACCAAGGGACTGGAAAGGACCTTGATCCCAACAACGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGGTCCTTCCAGGATTACACTGGGCAGAAGATCACCCTCGAGGCTGTCCTGAACACCACCTGCAAGAAGTGTGGCTGTAAAGGCCACTTTGCAAAGGATTGTTTCATGCAACCAGGTGGGACCAAGTATTCTCTGATACCTGACGAGGAAGAGGAGAAAGAAGAGGCAAAGTCAGCAGAGTTTGAAAAGCCTGACACCACGAGAAATTCTTCTAGAAAAAGAAAGAAGGAAAAGAAGAAAAAGAAACATAGAGACAGGAAGTCATCTGACTCCGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGACACACGTCAAAGGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAGAACGGAGCGTAGAGAGGGTGGTTGAGAGAAGGAATCCGGAGCCTGTGCTTTGAAGCCCTGGCTCCTAGAAAGACTCAGTAGTAAGAATATGGCCTCCCACCCTCTTCTCTCCCATGGGAGATGGCGTCCCCTTGTGTCACAGGCAAGTCTGGAAGTTAGGTATCAAAAGCATCTGCCTGAATGAGTTGTTCCCTTATCACTCTTGGGCCCTTTGCAAGTGACCCCTGCAGCTCTCCCATTCATTCACCCAACTTCATTCGGCGGGAGGTCGTATTACCCTCTCCAGCTGCCACTGCCAGAGCCAGATTCCCGTACAGGAGTCCAGGATAGAGCCACAGGAACTGCTGTGGGGGTGAGTCTGGCTGTAGTTGAACAGAGTGATTGGCCCCTGCCTATTGGCCTACCTACCCTGGCCTGACTGGTGGATGGTCTCTGTGACATCCAGCACACGGGCAGAGGGAGACTGGCAGTATGAGGGAGAACACGGTAAGAAGTGGTGCTCACTTTCTCCATCCCCCCGACATGATTCTGCTATGTTAGAAGTGACAGCCAGTGGTCACAGCCAGAAAAACATTGTTTGCAGTGACTTAGCTTGCTTGTGACATTCCCGCAGACCACTGAACCAGACAGCTCGAGCTGAAATCATTGCTTTACTTTGTATTTACTACAGTGTGAGTCAATTGGTTCCATTTCAGGTTTCTGCTTAAATTCCTGGTACTAAATGGAAGTGTGTCTGGTTTTAAACTTACTGAGAGTCCTTATTAGTATAATCCCTCTTCCTGTAAACTTACAGATTTAAAAGTCATTGAGGCTGCATTAGGTGACAGGAAAACATTTAATATGTCACTTTAGACCTTGGAGAGCGGCCCAGCTAAGGTACAGAGCCAGAGGCACTAGCAGGTCACAGCCTTCTTAGGAGATCACTTATAAGCCCTCACTTCTGTAATGATCGGATGACCTCTCCCCCAGGGCTGACTGGAGAACCAGTAAGAATTTGTACCCATGAGTAATGGCCTGGCACATGTGCAGAAGCTCAGCAGTCATCTTGGCCAGTGGGCATTTTCTCCCACCACCACTGGCACAAGCCTGAAGAGAGTCCACAGCATTCCACAGAGAAGAGCAGCTGTCTAGACCCCCTGGCATTC EMBV3_02705 AGCTAGGGTTTTGCACACCTGCATCGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCG Gene GeneID:616937|LOC616937:XM_002689598:73_cdna Constitutive 0 NULL GeneID:616937 8 GENE LOC616937 NULL similar to K06A9.1b EMBV3_39577 CCCTGCTCCGCGCCCCGGGCGCCTTCGCCGACGGTGGAGAAGACGGTGGAGCACCTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04742 CGCTTGTGTCATTCTGGGTTTTAAAGAAAGGCCATGGCTGTTATCTTCTCAAATTTTAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31076 ACCAACCAGGATGGGCAAACCCAGGGTCCTACATCCAGAGACATCCCCAAAGCAGCCATA Gene GeneID:512168|LOC512168:XR_084679:460_cdna Constitutive 0 NULL GeneID:512168 2 PSEUDO LOC512168 NULL similar to Transmembrane and coiled-coil domains 4 EMBV3_25464 AGTAACCATCTACATAGTAGTTTTTCATAAGTACCTGTGATATTTATGTTCAGCTAACTG Gene GeneID:540329|PPM1K:NM_001046474:195_cdna Constitutive 2 NULL GeneID:540329 6 GENE PPM1K MGC137505 protein phosphatase 1K (PP2C domain containing) EMBV3_35071 CAACCGCGATACTTCCTACAGGAGACCGCACAAAAAAGCAGTTGGCTGGTTTCATATTGC Gene BVT0102_239396 + 0 NULL GK000003.2:110319028-110338487 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174693 TCONS_00174690 TCONS_00174689 TCONS_00174698 TCONS_00174697 TCONS_00174700 TCONS_00174695 TCONS_00174696 TCONS_00174701 TCONS_00174699 TCONS_00174694 TCONS_00174691 TCONS_00174688 TCONS_00174703 TCONS_00174687 TCONS_00174692 TCONS_00174702 1 XLOC_104670 Coding TCONS_00174687 XLOC_104670 Coding Coding EIF2C3 3:110335642-110349636 j TSS129586 3902 1 TCONS_00174687_2 318 7 0.721646537554492 3.83696333439548e-131 2.05466513085714e-13 0 2.75657720084986e-77 2.32610811159729e-159 3.09815857483662e-129 2.61751992545651e-15 3.12454059854458e-109 1.02336766820532e-14 0.000227817441493346 8.43411650654184e-05 0.000293258350658655 7.19188577881419e-07 0.000373640186896619 0.000133174980845722 1.64550726974837e-35 1.39580494814884e-18 0.000600421255372437 3.45422378526311e-96 0 2.56896941829284e-06 7.82421553633785e-15 1.16217532758635e-69 0.00021001237792222 1.72572969626624e-115 1.6055054177698e-55 3.31050353250274e-33 2.36686123198704e-24 8.61600738285931e-10 1.012733231351e-15 NM_001001133.1 AGO3 Bos taurus eukaryotic translation initiation factor 2C, 3 (AGO3), 0.0 1471 99.05 0.213992824192722 XM_005270575.1 AGO3 PREDICTED: Homo sapiens argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. 0.0 2304 87.93 0.460276781137878 TCONS_00174687_2 sp|Q9H9G7|AGO3_HUMAN AGO3_HUMAN Protein argonaute-3; 0.0 578 100.00 0.864779874213837 1 coding 0 0 0 0 -0.0350600492773903 0.842615241275936 0.0445527791004353 0.385986567162586 GAGATGAATATAGAATTTTATCAAGCCCAAGAACTAAGAGAAATAGTCATTTGACTTTCAAGAATACAATTTTAAAATAAAATGAACCACTAGCTACTTTATGACTATTAAATATATGTTACTCAAATTTTACACTTTTGTTCAGGGAGTGGTAGACTCCCTTAATCCCTTCCAGTGTGGTTTAATGATTCTTTATCTCCTTTCAAGATTATACTGGCTTAAAATACCTTCTGTGTTCCAGCAACCAGTGATCTTTTTGGGAGCAGATGTCACTCATCCGCCAGCTGGTGATGGGAAGAAGCCTTCTATTGCTGCTGTTGTAGGTAGTATGGATGCCCACCCAAGCAGATACTGTGCTACTGTAAGAGTTCAGAGACCCCGACAGGAGATCATCCAGGACCTCGCCTCCATGGTCCGAGAACTTCTCATTCAGTTTTATAAGTCAACTCGGTTCAAGCCTACTCGTATCATCTTCTATCGGGATGGTGTTTCAGAGGGGCAGTTCAGGCAGGTATTATATTACGAACTCCTAGCAATTCGAGAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTAGTTCAGAAGAGACACCACACTCGACTGTTTTGTGCTGATAGAACTGAAAGGGTCGGAAGAAGTGGCAACATCCCGGCTGGAACGACGGTGGACACAGACATTACCCACCCGTATGAGTTTGATTTTTACCTCTGTAGTCATGCTGGGATACAGGGTACCAGCCGACCTTCACACTATCATGTTTTATGGGATGATAACTGCTTTACTGCAGATGAACTTCAGCTGCTAACTTACCAGCTCTGCCACACTTACGTGCGCTGTACACGCTCTGTTTCTATACCTGCACCAGCGTATTATGCTCACCTGGTGGCGTTTAGAGCCAGATATCATCTCGTGGACAAAGAACATGACAGTGCTGAAGGAAGTCACGTTTCAGGACAGAGCAATGGACGAGATCCACAAGCTCTTGCCAAGGCTGTACAGATTCACCAAGATACCTTACGCACAATGTACTTTGCTTAAAAAGTCTAAGAATATTCTCTGAGAGGAAGAACTGGAAGATGAATCGACATACAACTTATGTTTCCAGTGGAGTCAGCTGGGTGAGGATGCCTCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAGGGTCTGATTTTATGTTGATACAGGAAGATTGTTTACTTCATCAAGGAACACAGCACCATTATGCAATATGAAACCAGCCAACTGCTTTTTTGTGCGGTCTCCTGTAGGAAGTATCGCGGTTGTTTTGTTTTCACTTTCTTGTAGTCTAACCCTTTTAATGCCTTTACCTCAAGTTGCTTGGCAGCACAACTCTTTGCAAAAAAAAAAAAAAGTAAAGAAAAAGTAAATGAAGGTTTTTTTTTTTTTTAAAACTACACCTATATGAATAATCAAAGTGATTGTTCACAATGATGTGTGCAAAAAAATTAATGTGCATTCATGTATTCTTGTAAAAGTTATCTGTATATTTTACATATATACATGCATACTGCATATGCATATATATCTGGATCTACACTGATAGTAGATATATATGTATCCCTGTATATATTTTATAGTTCATTCCGTCGGGGAACCGTCTTTCCCTTTTATTATTCTCCCACCGCCACTTTCATTTTTCTCTCTACCTCCCTTGCCTTCTTCACCTACATTTTTTTCCCCTGATGCTACCAGTGACATTCAAATATTCATGTATCTGGTTCATTTGAATATGAAGCATGGCAAACTAGATTTTTATTTTGCACACCCTACTCCTATCTCTTGTCTCATACACAATTTTGAGTCCTCAACTCTTGGTATTGCTTTCCTAAGAAACAAAATTATTTTATATATACATATATATATAAAATATGGTTTTGTGAGAGCGAATGTCTGCCCCCTCCAGCCCTCAGCTTACATTTGCCATTTGTGCAATGTGTACATAAGCAGTAGCACCTAAACCATTCTTTTTCTTTAGTGAATTTGTTCAAGCTGCTATTAAAAAAGAAAACTTGTCAAAAGTTGTAACTCTCTCTATAACTGATGCTACTATTCTAAAGTCTTCTGTTTCTATGTGTTATACATGGAAATTCCTTAAAGCTTTTATAAAGGGTAAATGTTTTACATGATTGGAATCGTGTAGGGTTGAGGTCTCTGAAATTGGGTAGAGAGAAGGGTTGTTGAGGTTTCTTTTAATTTTTTTTTGCTAGTTTACTTGCTGCCTCTCATACCTTAATGTGATTTTCATATATATATTTTTATATATATGTGTTGTATATATAAACATATATGTATGTGTGTTGAAGTATAGCTTCCTTTTCTTTTATATTTATTAGAATAGTGCTTTAATAATTATAAAATTGAATTGGCAACATCTTTTATAGAAATATAATCATGTTTATTTTAAGAACTGACAATTTGTTTTTGCTCTCTTTTAGTGCAATAAGCAGTTTTAAAAAGAAAGCTGTGTCTGTTTTACATCTTTACCACAAATCATGGGAGAAACAGGCACCTCCATAATTTTAAAAGGGCAAAGTAATATAGCCTTAATTTCAGAAGGAAAGTTTTATAATTTTCAAGTTTAAATCATGTCTTATAAAAATCATTATGAAAATGAAGGAAGCTAAATTTCCTAAATGAGTCTTGACCTTGAATATTAAAGTTGAAGAACTTTGATTTAATTAATGACAATGACTAGCTTAAGATATAGAAGACATTTAAATTTTTGAAAAGAGCTCGTGTTTATTGAAGAATCATACTGGTAAGCTGCCAGTTTTCATTTACTAAAATGTGTCAGGAAAATATAAAATGATATTTTTAAAACTTTATTTGCTAATTCATCACTAGTGTAACTTTCCTTTTAAAATTAGGGAGATGGTGACAAAGGAAGTTATCATTTGAAATGAGTTAAATCACTGAAATGTTGAAAAACTTTTTTGCAGAACTTTTGTTTTTATTAACTTCACTTTAAGATAGTAAAAAATACTATAAAGCTGTCAAAACCGAGTTTATCAGTAACCTTGGATTCAAGGGAGCTTTGCACTTTGTAACTCATGAAAATTGCAAATTTTTTTTTTTTTTTTTTGCACTGGTTCAGAGTGTAGATATTACAGATTGTTTCCAGTGGGCATTGTTAACCTTTCAGAATTCCATCTGCACATGAAAACAAATGGATTAGCTCTTTAGTTTCTCTCTTACCTGTTATCCATGTAATGCCAATTTACTGTATTTTGAGCCTAAAATCTGAGCCCACGTCCTCCAACAGGTATGAAATCTTTTGTCCCCCTGCCAGAAAATTAAGAAAGTACTGTATTTTGTATGTTTATTATATTGAAGTTGCTGAGATGCAATTTACAACACTGTTTCAAAGCTCTTTACATAAGGTGATGTTTGTGTAGTATATACATTTTTCTCCCAACCGCCTCTCCTCCTCCAAAAAATGTCTATAACGGTTGTATTTTTTTTTTTACATTGAAGTTTCACTGAATATAATCCAGAACATAGACAGGAGAAGGAAATAGTGTATCTTAGATGGTAAAACCTGATGGCGTATGTTTGCTCAGTATGAGTAAAGCATCTTCTTTATCAGTGGGAGTTTCACAGATTCATGTGGGAGACTTTAGGGCCTAGGGAAGAACTGTAGATAATTTCCCCCTGTTTACCTGGTTTACCTAATTTCAGTCACCTAATCTCACATGTGCTAAAGTAAAGCCCACAATTTAAATCTATTTAGAAGGACTTTTACAGAGGAAAAAAAATTTTTTTTAACATAAAGCTTTACCTTTGAAATGAGTTCTTTATAAAGGGTGCTCTTAGAGTTTCAACATTGCTAGTTTAAAGTTGGTTAACTTGAAAGAATA EMBV3_16458 CGACTTCTACATGACCTATGACAGCCTCCAGCATGAATCCCAGCCTGTCTACTGCAACCT Gene GeneID:282599|LRRC25:NM_174688:18_cdna Constitutive 0 NULL GeneID:282599 7 GENE LRRC25 MAPA MGC148930 leucine rich repeat containing 25 EMBV3_09029 CGCAACTTTCAGAGGACGATCAGGGAACTTACTTGTGCCATGCAATATTCGAGTTAGGGG Gene GeneID:785366|LOC785366:XM_002696344:26_cdna Constitutive 0 NULL GeneID:785366 20 GENE LOC785366 NULL similar to embigin homolog EMBV3_19384 AAAGAGCTTTCTCCCTGCTGTCCCTTCAGCCTCTAAGATGAAACCCAGCCTCAGTTTTCA Gene BVV0102_300100 + 0 NULL GK000025.2:41390546-41408940 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03520 TATCATTGAGACTAGGCAATGGGAGACAGATCACTACCATGGGCTTTGGAGTCAGATGAG Gene BVV0101_082028 + 1 EMBV3_30904 GK000006.2:63416349-63982703 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25399 AACTAAGCCCATGCACCACAACTACTGAGCCCATGCTCTGGAGCTCCCATGAGGCAGCTA Gene BVV0102_012555 + 0 NULL GK000023.2:39846199-39884003 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11513 CTCTTATTCCTCGTTTCCATGCCCAGTTATGGCCCCCCTTCCACATCCTTGAACCCTTAG Gene GeneID:539209|LOC539209:XR_084611:837_cdna Constitutive 0 NULL GeneID:539209 18 PSEUDO LOC539209 NULL similar to Dapper homolog 3 (Antagonist of beta-catenin Dapper homolog 3) (Arginine-rich region 1 protein) EMBV3_19989 CCCAAACGTTTCGCCTTAGTCTGCTGCATTTTTAGCAACTGGTGACCATCCAGCTGGTGA Gene BVT0102_270703 - 1 EMBV3_02586 GK000018.2:47360239-47382726 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23284 GCCCAAAATATCACCCACATCTGCCTTATATTCCACCATTCATTTTAATTCCTTCAGGTC Gene GeneID:538004|NAGS:XM_002696039:319_cdna Constitutive 2 NULL GeneID:538004 19 GENE NAGS NULL N-acetylglutamate synthase EMBV3_05072 ATGCCACAGAAATACTGAAAGAAAGCAAAGGAAACGGGGGCAGCCGGACCCCAGCACTAA Variant GeneID:527089|LAYN:XM_002692987:144_cdna 762^861 2 EMBV3_00450 GeneID:527089 15 GENE LAYN NULL layilin EMBV3_32493 CTGTAAGGTCTTCAGAACAGGAGCCTCTCAATGTTCCCTTCTATCATCGTGTACATCCGT Gene GeneID:539466|PPP1R3C:NM_001076164:36_cdna Constitutive 0 NULL GeneID:539466 26 GENE PPP1R3C MGC140560 protein phosphatase 1, regulatory (inhibitor) subunit 3C EMBV3_39819 ACCCGTTCAGTTCAAAACATAATGTTATTGGAGGGTACTGGTCCTCGTGTTATTTCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24836 ACCAATGAACAGTTGCAGATACATTATAAGGACAGCAGCGTTCTCGGATGCTAGCTACTC Variant GeneID:540223|COPS4:NM_001034694:25_cdna 569^719 1 EMBV3_30200 GeneID:540223 6 GENE COPS4 MGC128170 COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) EMBV3_00731 TGAACTTCAAAGCAGTATGACAGATGGTCCTTGCTTGTTAAATGCCGGCAGTCCCCGCTG Gene GeneID:515343|NEIL3:NM_001034490:14_cdna Constitutive 1 NULL GeneID:515343 27 GENE NEIL3 MGC127868 nei endonuclease VIII-like 3 (E. coli) EMBV3_29839 TTTTCTTAGGCACGGTGGGAGCTGAGTAGGTCTGGGATGGACAGGGAAGGGCAAAGTACA Gene GeneID:281913|MFGE8:NM_176610:68_cdna Constitutive 0 NULL GeneID:281913 21 GENE MFGE8 MGC127309 milk fat globule-EGF factor 8 protein EMBV3_31315 TTGCCAAGGACTGTGACCTTCAGGAGGATGCCTGGCCCGCGACTGCGACCACGCCGACGA Variant GeneID:504831|CNBP:NM_001034224:8_cdna 215^314 1 EMBV3_11369 GeneID:504831 22 GENE CNBP MGC127608 CCHC-type zinc finger, nucleic acid binding protein EMBV3_11633 TGTCCACACTCAAGTGACACTTCTACTCTCCTTCTCCACCCAAGAACAACCTCAACCACC Gene GeneID:618362|KRTAP6-3:XM_002684626:124_cdna Constitutive 0 NULL GeneID:618362 1 GENE KRTAP6-3 NULL keratin associated protein 6-3 EMBV3_13975 CCTGTGGAATTGTGAATTCATACTAAGCTTCTGTGCAGTAATACGATTTCCATCTCTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21170 ACCTGGAGTGGAATTGTTGTTCTGTGGTAGTTACTTTGGTTTTTTGAGGACCCTCCATAC Gene BVV0102_128103 + 0 NULL GK000018.2:61032897-61040305 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31882 CATCCTTTCCAGGGCTGGCTATGAGTTCTCCCTGGGGATGGTGGAGAGGTTTGCATTTTA Gene GeneID:613571|MGC152007:NM_001076278:219_cdna Constitutive 2 NULL GeneID:613571 26 GENE MGC152007 NULL protein fucU homolog EMBV3_41938 AAGCGTTAGTTGACAAGCGGGTTGCTCCGGCCCTTGTTACCTTGTCCAGTGATCCTGAAT Gene GeneID:504761|LOC504761:XM_002697785:361_cdna UTR3_Alt 2 NULL GeneID:504761 24 GENE LOC504761 NULL similar to LisH domain and HEAT repeat-containing protein KIAA1468 EMBV3_18805 AAGGCAGTTGGAAAACTGGGCTTGGGATAGGGCGGAAGTGCTGAGTTTACGGACGTCTTA Gene GeneID:614731|LOC614731:XM_002698056:12_cdna Constitutive 0 NULL GeneID:614731 25 GENE LOC614731 NULL similar to BolA-like protein 2 EMBV3_11791 TGCCAGAGCTTCCTAGCGACGAATGATCAGTCAGGCTGCGGTATATCAGGTTTGTTCAGA Gene BVV0101_013465 + 0 NULL GK000015.2:78633541-78674044 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062472 TCONS_00062473 TCONS_00062475 TCONS_00062471 TCONS_00062470 TCONS_00062476 TCONS_00062474 1 XLOC_037306 Coding TCONS_00062470 XLOC_037306 Coding Coding FNBP4 15:78656284-78696357 j TSS46290 2354 2 TCONS_00062470_4 255 9 0.941480335396287 0.00266877384412401 0.00128572104866991 0.000836483620111041 0.00208816834274454 0.000662986898437129 1.37775138463591e-09 0.000155837664658085 0.000927117068323922 0.00122907267493696 2.39677217865481e-63 4.24961843041222e-05 0.000123585727827226 5.35630018886509e-09 0.000658286355196581 9.55505764299049e-05 6.89004641618487e-33 0.000317318001384 0 0.000238971420170409 0.00074695714013706 7.51619653551061e-17 0 2.44785606091478e-05 0.000141618479945437 0.00353385231893481 0.00159340038918637 0.00229307617058457 9.75766990816552e-57 2.89398505449839e-05 0.00018765318610525 XM_005194716.1 AGBL2 PREDICTED: Bos taurus ATP/GTP binding protein-like 2 (AGBL2), 0.0 2547 100.00 0.599405267629567 XR_242824.1 AGBL2 PREDICTED: Homo sapiens ATP/GTP binding protein-like 2 (AGBL2), 0.0 1972 88.16 0.658453695836873 TCONS_00062470_3 sp|Q5U5Z8|CBPC2_HUMAN CBPC2_HUMAN Cytosolic carboxypeptidase 2; 6e-134 403 85.85 0.921397379912664 1 coding 0 0 0 0 0.339884000868833 0.495912507164119 -0.599906717940669 2.99609827268029e-05 GCCCACTGAAGATTGCTATTTTACCAGTTCCAGAGTGGGAGGCAAACGGGGAATTATCAAGGAACTTTCTGTCTCCTTACAAGGACCAGAAGATAATACTCTGCTGTTTGAATCAAGGTTTGAGAGTGGGAACCTGCAGAAAGCTGTCAGAGTAAACACCTTTGAGTATGAACTCACCTTGCGAACTGACCTCTACACAAATAAGCACACTCAGTGGTTTTATTTTCGAGTTCAGAACACCAGAAAAGATGTCACCTATCGCTTCACCATCGTCAACTTGCTAAAAGCCAAGAGCCTCTATACTGTAGGGATGAAGCCGCTCATGTACTCCCAGTTGGATGCCAGCACCCACAGCATTGGCTGGAGGAGAGAAGGAAATGAAATCAAGTACTTCAGGAACACCGCGGAGGACGGACAGCAGCCCTTGTACTGTCTCACGTGGACCGCTCGGTTCCCGCACGACCGGGACACTTGCTTCTTCGCACACTTCTACCCATACACCTACACTGACTTGCAGCGCTTCCTCCTGTCGGTGGCAAACAGCCCCGTCAAATCTCAGTTCTGCAAGCTCCGGACTTTGTGTAGGAGCCTAGCAGGAAACACCGTCTACCTGCTCACCATCACCAACCCAGCCCGGACCCCTCAAGAGGCAGCTGCGAAGAAAGCTGTGGTCTTGACTGCCCGCGTGCACCCCGGAGAAAGTAATGGCTCCTGGATTATGAAAGGCTTTTTGGACTTCATCCTAAGCAACTCCCCAGATGCTCAGCTCCTCAGAGATATCTTTATCTTCAAAGTGGTCCCCATGCTAAATCCAGACGGAGTGATCGTGGGGAATTATCGGTGTTCGCTGGCTGGAAGGGACTTGAACCGGCATTATAAAACCATTCTGAAGGAGTCTTTCCCCTGCATCTGGCACACCAGGAATATGATCAAGAGTTCTCTTTCCACAGTTGTAACTTTAAAGTCCAAAAGTGCAAAGAAGGAACAGGACGCGTGGTGATGTGGCGGATGGGCATCCTCAACAGCTATACCATGGAGTCTACGTTTGGCGGGTCCACCCTGGGCAATAAAAGAGACACTCATTTTACCACTGAGGATCTGAAGTCCCTGGGTTATCACGTCTGTGACACCCTTCTCGATTTCTGTGATCCTGACCGAACCAAGTTCATGCAGTGTCTGGCAGAGCTTAAAGAGCTCTTACAACAGGAAATCCATAAGAAATTCAAGGAACTTGGACAAGATATGGATTTAGAAAGAAGCTGGAGTGACATCTCTTTGTCTGACGTTGAATCCAGCACCAGCGGTTCTGACAGCTCCCTCTCAGATGGCCTCCCTGTTCACCTACTGAACATAGCAGATGAGTTGAATCAGAAGAAGACGATGTATAAGAAGAAAAAAAAGGCACTTAAGTCGAGAAAACAGCGAAACAAACAGTATCAGAGACATACTTTGATGCCGGAGTCAAAGTTGACTGAAGATGCCCCAGAAAGGGCAGGATTTCCTTCTACTCTGCAAAAGCCTCCTGCCTTTTTCAGAACTTCAGAGAATGCCAGTTCTTCAATGATGAAATATGAAAAATCAAGATTGAATAAGAAAGAGAAGCCAGGATTTACAGTGTCTTGCGATCCAAAGAGAAGCACCAACCCCAGCCAAGAGCCAGCTCCATCCGTGAAGCCAAGCTGGTCCAGGAACAGACATCCTGGCACAAGGGGAAGCCACAGGACCGCCGTGGCATACCCATCCTTGCACGTATACACCTACCCGTAGAGTGCCTGGGCCACACCACACCGGGACTTCCTTGCTGTGTTCTGGGCTCGGCACGTTTTGTAACGAGGGGACTTGTGTGCTCGGGAGCTCCATCCACACGTTGCATTCTGTGCTGTGTGTTCATCATGCACCACCCTCACCCCAGGAGCTTACAGTGCATGTAGGATCTCAGGACACATACCTCACGACTTAAATTATTTTTTCATGAAATGAAATTTTATTGTGATGTATCCAAAAGCTTCCCTTATCAGAGATTGAAGTGTGTGCTCATGAAACTACAACACAGATATACCTCAGTTTATATATTCTCTTTAAAATTATGTGCAAAGAAGCTTTAAAAGAGCAGACTATTTTAAACGTACTCTGGGAGTTTGCTATATTAAATAAAGAGTCTTGTGCCAGAGCTTCCTAGCGACGAATGATCAGTCAGGCTGCGGTATATCAGGTTTGTTCAGAGTGAAGTGTTCCCACATAGAGGAAAAAACTCATGCTATTACCTGGAAGTCAGTGTTGCATATATTATGCTCAGCATGGTTATGTAAGTTTTTTAACCCATTGATTAAAATTCTTTCGCTCCCACAAGTTAT EMBV3_19433 TGCTAGACAAGGTTTGCTGTTGTGCAGTGTGCCTGTCAACTACTGGTCTGTACTCTTTGG Gene GeneID:282521|SERPINE2:NM_174669:46_cdna Constitutive 0 NULL GeneID:282521 2 GENE SERPINE2 MGC143011 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 EMBV3_27090 GAAAGCATTCAACACTTGTGTCGCTCACATCTGTGTCTTCCTCCAGTTCTACTCCCTTGG Gene GeneID:781483|LOC781483:XM_002693289:89_cdna Constitutive 0 NULL GeneID:781483 15 GENE LOC781483 NULL similar to olfactory receptor, family 52, subfamily A, member 1 (predicted) EMBV3_16125 GTCCTGCTGACCTTCGGGTCAGTGCGGGCTGACAGATGATGAAGTAGTACAGAGAGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37027 TCACTGAAAAGGGGGCTATGCCTGTGGCTTCCTTGATGTGGAATCATTCACTGTGTCCTG Gene GeneID:507102|SREBF2:XM_002687950:39_cdna UTR3_Alt 2 NULL GeneID:507102 5 GENE SREBF2 NULL sterol regulatory element binding transcription factor 2 EMBV3_18569 CACTCCATCACATTCAGCCTCCCGTTCTGCAGCTCCAACCACATTGACCACTTCCTCTAT Gene GeneID:782190|LOC782190:XM_002686607:106_cdna Constitutive 0 NULL GeneID:782190 3 GENE LOC782190 NULL similar to olfactory receptor MOR208-1 EMBV3_12240 AATCTCAAATTCATCCTCATGGACTGCATGGCCCAGGCCTTGGTGCAGTATTTGGAGGAG Variant GeneID:616375|ROBLD3:NM_001034791:224_cdna 283^372 2 EMBV3_12286 GeneID:616375 3 GENE ROBLD3 MAPBPIP MGC127161 roadblock domain containing 3 EMBV3_06721 TTCCAAGCATCTGGGGGTTGTTGGCAGGGGTTAGTCTTCATCTGTCTTTCTGGACTGACA Gene BVT0102_090448 - 1 EMBV3_09154 GK000019.2:33650142-33673395 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096384 TCONS_00096383 1 XLOC_057959 NonCoding TCONS_00096383 XLOC_057959 NonCoding NonCoding - 19:33665777-33672753 - TSS71644 559 1 TCONS_00096383_1 36 0.497316636851521 3 0.920286738351255 0 0 3.31089686314922e-05 2.24623800513431e-05 0.000132482512837591 0.000199801671403672 0 0 6.74012518684758e-10 0 0 0 0 0 0 0 0 0 2.57480320598075e-07 0.000823348323216476 1.08612869281244e-05 0 0 5.99809427861592e-05 0 3.78110398697634e-05 2.32425295468687e-09 0 0 0 NM_001105482.1 AARSD1 Bos taurus alanyl-tRNA synthetase domain containing 1 (AARSD1), 6e-20 102 81.73 0.184257602862254 XR_246721.1 LOC101927528 PREDICTED: Homo sapiens uncharacterized LOC101927528 (LOC101927528), misc_RNA. 3e-11 73.4 75.59 0.21824686940966 0 noncoding AGCGGGCGCTTAGCTCGTGCGGGATCCCGCGGACACACAAGAGAGCAAACGGCAGAACCGAGATATTGCAAGTCCCGCACTCTGTCTGCACGTGGCGCTGCTGAGGCGTCCCACCTAAGACACTCCAGTGAGAGTCCTCCTTGCTGGCATTGGTGAAACAAGTGTGATGGGAAATCTGCAAGACAAGAAACTGTCAGCCCAGAAAGACAGATGAAGACTAACCCCTGCCAACAACCCCCAGATGCTTGGAAGTGGATCAACCCTAGTAGAGTCTTCACATGAGAAACCAGTCTTGGCTGACACCTTGACAGCCTCACTGCAAGGACCCAGCTAAGCTGTGCCTGGACCTTCACCCACAGATACTCTGTGCTGTGTGACATGTGGCCTCTTAGTTCCATGACCTGGAATGGAACCCGAGCCTGCTGCATTGGAAGTGCAGAATCTTAACCACTGGACTGCCACGGAAGTCCTCAATATTTTATTATCTTTAATTCATATTTTATTGTATTATTCTTAATGAAGTTGGATGTTTTTTTCATATCTTAAAATATTTTCTAAT TCONS_00093296 r 5' 6925 TCONS_00093296 r 5' 144 EMBV3_32752 AGGAGGCGGCGCTGAGCCTAGAAGGAAGAGGCCGCCACCCACCTCCCACGATGGCTCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11166 TGCACAGGCAGGTCCTGGTGATCCTGTCTCAGCTGGAAGGAAATGCTGGCTTCTCTATCA Gene GeneID:522068|SOLH:XM_002697900:501_cdna Constitutive 0 NULL GeneID:522068 25 GENE SOLH NULL small optic lobes homolog (Drosophila) EMBV3_09914 GCTTCCACTTAACTGACTGGCCCGCAATATAGTAGGAACAGCATCTCCTTTGTACTGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14700 GAGGATTTTGGTTAGATCTTTTAGTGTTATGTAAATTTATGCTGCAATAGCTTTTGCTGC Gene GeneID:537016|CPEB3:XM_002698375:1_cdna Constitutive 2 NULL GeneID:537016 26 GENE CPEB3 NULL cytoplasmic polyadenylation element binding protein 3 EMBV3_32386 CCTCCCCTTCACCCTTCTCCACTGGTGACCATAAGTCTGTTCTCTAGGTCTGTTAGTCTA Gene BVT0101_034982 - 0 NULL GK000014.2:11907431-12326998 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06301 ACCTGTCCTCATTTTTCAGCATTGAACAAACCTAACCAGAATAGTCTTGACTAAAGCAGG Gene GeneID:100296348|LOC100296348:XM_002683865:2_cdna Constitutive 0 NULL GeneID:100296348 X GENE LOC100296348 NULL similar to X antigen family, member 5 EMBV3_29099 TGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCG Gene GeneID:100313362|MIR136:NR_030865:80_cdna Constitutive 0 NULL GeneID:100313362 21 GENE MIR136 bta-mir-136 microRNA mir-136 EMBV3_06331 GTCTCAAGACTGGTCAGGAAGTGTGTCTCAACCCCACCGCCCCCATGGTTAAGAAAATCA Gene GeneID:281734|CXCL2:NM_001048165:23_cdna Constitutive 0 NULL GeneID:281734 6 GENE CXCL2 GRO2 GROB GROX chemokine (C-X-C motif) ligand 2 EMBV3_15401 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26670 CCCTCTCAGACCGCTTCATTCCAACCTAAGGCCTCTCGCCTCATTGTCACCTTCGACGAG Variant GeneID:532839|RAP1GAP:NM_001076888:215_cdna 163^708 1 EMBV3_08921 GeneID:532839 2 GENE RAP1GAP MGC139675 RAP1 GTPase activating protein EMBV3_30635 AGGCACTGGCGGCCGCTGGCTACGATGTGGAGAAGACCAAGAAAGCCACGGGCGCGGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24519 CAAACAGCGGGACTTCAACCAGAACTTCATCCTGCTAGTGGGGTGGCGGGACACCCCCAG Variant GeneID:520351|NXT1:NM_001075805:38_cdna 580^653 1 EMBV3_43437 GeneID:520351 13 GENE NXT1 NULL NTF2-like export factor 1 EMBV3_34865 TGGTGGGAGGTGGCGCCTTACTGCTGTTTGCCCTCGGATTCATCATATGCTTCGTGAAAA Gene GeneID:540622|CDCP1:XM_002697118:44_cdna Constitutive 0 NULL GeneID:540622 22 GENE CDCP1 NULL CUB domain containing protein 1 EMBV3_06294 TCTTTCCAGCGCTGCGCTCGGACGGACAAGGACTGAAGAGGGTCACGGGCGGCTTCAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00910 TGAGGCCACAGATTGTGCGTAATTCCCGGCAGCCACCTGCAAATTCATAACGAGTCAACG Gene BVV0102_187585 + 0 NULL GK000024.2:59115569-59250702 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31178 GCTCTCACACTGCTTCAGAACATAACTAACTGCCTCAACGAAGAGCACCGTTTAGCTGCG Gene GeneID:100138038|ARMC10:XM_002686754:38_cdna Constitutive 0 NULL GeneID:100138038 4 GENE ARMC10 NULL armadillo repeat containing 10 EMBV3_33315 GCATGTTCAAACGAAAAAGGGTGTGGCTTCCTTACAGGATACAGAGGAAGGACTGGAGTC Gene GeneID:784593|LOC784593:XM_002688992:70_cdna Constitutive 0 NULL GeneID:784593 7 GENE LOC784593 NULL similar to Znf domain containing protein EMBV3_34356 CTACCGCCACCCCTGTGGAGTTGTGTTGATGAGGATGGATGTATTTCTGTCATAGATGCC Gene GeneID:512993|WDR77:NM_001015584:92_cdna UTR3_Alt 2 NULL GeneID:512993 3 GENE WDR77 MEP50 WD repeat domain 77 EMBV3_12134 AACGACATGCTCGATGGCTACTCTGGGAGTACACTCAACGCGAGAAGCTAATTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_02506 GGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCTTTCACTTTCAGTCTGTATGTGTCCC Gene BVV0102_352006 + 1 EMBV3_41722 GK000015.2:993000-1046941 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00218178 TCONS_00010367 TCONS_00208613 TCONS_00088086 TCONS_00148278 TCONS_00252006 TCONS_00238893 TCONS_00244651 TCONS_00239411 TCONS_00162783 TCONS_00214738 TCONS_00038382 TCONS_00179124 TCONS_00166330 TCONS_00040697 TCONS_00129427 TCONS_00161836 TCONS_00219681 TCONS_00238308 TCONS_00251853 TCONS_00220662 TCONS_00187806 TCONS_00152890 TCONS_00070841 TCONS_00207978 TCONS_00135528 TCONS_00197486 TCONS_00091329 TCONS_00253888 TCONS_00189889 TCONS_00177994 TCONS_00210178 TCONS_00017462 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00244653 TCONS_00200531 TCONS_00251623 TCONS_00244654 TCONS_00056147 TCONS_00021194 TCONS_00089425 TCONS_00116799 TCONS_00206764 TCONS_00187583 TCONS_00019991 TCONS_00040834 TCONS_00206862 TCONS_00189806 TCONS_00152647 TCONS_00198434 TCONS_00148253 TCONS_00019197 TCONS_00125002 TCONS_00072406 TCONS_00019962 TCONS_00089139 TCONS_00040896 TCONS_00250939 TCONS_00239410 TCONS_00175881 61 XLOC_142855 XLOC_131641 XLOC_005918 XLOC_127126 XLOC_052873 XLOC_090160 XLOC_154947 XLOC_145559 XLOC_150512 XLOC_146077 XLOC_099664 XLOC_130757 XLOC_022207 XLOC_108897 XLOC_101168 XLOC_024513 XLOC_078140 XLOC_098721 XLOC_133000 XLOC_144975 XLOC_154794 XLOC_133979 XLOC_113849 XLOC_092655 XLOC_042618 XLOC_126492 XLOC_081751 XLOC_119147 XLOC_056104 XLOC_156826 XLOC_115926 XLOC_107767 XLOC_128688 XLOC_009039 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_122183 XLOC_154564 XLOC_033950 XLOC_011867 XLOC_054210 XLOC_070965 XLOC_125285 XLOC_113628 XLOC_010669 XLOC_024648 XLOC_125382 XLOC_115843 XLOC_092412 XLOC_120088 XLOC_090135 XLOC_009877 XLOC_076545 XLOC_044175 XLOC_010640 XLOC_053925 XLOC_024710 XLOC_153882 XLOC_146076 XLOC_105660 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_16647 TATAGATCCAAAGTGGCCTCTACCCACCCAGACATGCCTCTGTCTCCTCTTCTGCCAGGA Gene GeneID:617572|TMIE:XM_002697115:34_cdna Constitutive 0 NULL GeneID:617572 22 GENE TMIE NULL transmembrane inner ear EMBV3_30573 TGCACGTCATGCTCTGTGCCAGCCTGCCTTTTGACGACACAGACATCCCCAAGATGCTGT Gene GeneID:538659|TSSK3:XM_002685613:266_cdna Constitutive 0 NULL GeneID:538659 2 GENE TSSK3 NULL testis-specific serine kinase 3 EMBV3_17287 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23378 TTGCCTCCTTTGACTCCACAAAAGGGAAAAAGGTGGATGGCTCTGTAAATGCCTATGCCA Gene GeneID:790677|SNRNP27:NM_001098162:83_cdna Constitutive 0 NULL GeneID:790677 11 GENE SNRNP27 RY1 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) EMBV3_11720 CTCGCCGGGAATTCACTGTTGAAGTTTCAGTGGCTTAACCACACTTGACCGTGGAGAGAA Gene BVV0102_247334 + 0 NULL GK000029.2:43696731-43703976 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165384 TCONS_00165382 TCONS_00165383 1 XLOC_100498 Coding TCONS_00165384 XLOC_100498 Coding Coding EHD1 29:43702782-43746516 o TSS123544 1918 1 TCONS_00165384_2 166 2 0.95618869046258 1.62336355607491e-132 1.87696076434769e-91 1.59277584846434e-05 1.57589360014258e-13 3.95434182212478e-88 7.95805328133101e-06 5.22204582638824e-06 6.44756999315878e-89 6.09000927069833e-57 8.80221360021346e-05 3.40331339004255e-09 3.37089394992654e-28 2.50578874907951e-15 2.28803870125408e-23 1.5444717145457e-156 0.00462280114443401 0.00220947046838101 0.00287784861717627 1.62156082096031e-05 3.43657419018976e-05 1.0701566087986e-43 0.000797729766596279 0.000783135662803374 0.0012675809808746 0.000153058314051641 0 6.34819873643596e-06 0.00018853568043087 0.000161570443545195 0.000229767581798824 NM_001015578.1 EHD1 Bos taurus EH-domain containing 1 (EHD1), mRNA. 0.0 1205 99.70 0.35036496350365 NM_006795.3 EHD1 Homo sapiens EH-domain containing 1 (EHD1), transcript variant 2, 0.0 820 85.06 0.389989572471324 TCONS_00165384_2 sp|Q5E9R3|EHD1_BOVIN EHD1_BOVIN EH domain-containing protein 1; 5e-103 310 100.00 0.897590361445783 1 noncoding 1 0 0 0 -0.350389603617332 0.0306698419961057 0.0366990112606196 0.439447790005801 CTGATGCGCTGCTTCTCTCCAGACAGGATCCCCGGCGTGTCAATGATGCTTATGCTGGCCAACGACATCGCCCGGCTAATGGTGATGGTGCGCCAGGAGGAGTCCCTGATGCCCGCCCAGGTCGTGAAGGGCGGTGCCTTCGACGGCACCATGAATGGGCCCTTTGGGCACGGCTATGGCGAGGGGGCCGGTGAGGGCATCGACGATGTCGAGTGGGTGGTGGGCAAGGACAAGCCCACCTACGACGAGATCTTCTACACGCTGTCGCCCGTGAACGGCAAGATCACGGGCGCCAACGCCAAGAAGGAGATGGTAAAGTCCAAGCTCCCCAACACTGTGCTGGGGAAGATCTGGAAGCTGGCCGACGTGGACCGGGACGGGCTGCTGGACGACGAGGAGTTCGCCCTGGCCAACCACCTCATCAAAGTCAAGCTGGAGGGCCACGAGCTGCCCGCCGACCTGCCTCCGCACCTGGTCCCGCCCTCCAAGCGGAGGCACGAGTGAGTGCCCCGCCGCCAGACTCCGGCACCCAGTGCCCGGCCAGGCGGAGACTTGGTAGGGGGTAGCCCGCAGTTCCCAAGACCATAAAGACTGAGTGCTGTTTCCACAGCTTGCAAAGGAAAACCACCATCTTTCTCTTAAGGCTGCTCCTGGGGAGGCAGGGGTGATACTCACATGTGAATGACGGAATTTTGTGCATAAGAACTATGGATATTTTTAATATATAACGTTAGAGGCAGCGTTCTTTCTTGCCTCCTTCTCTGTCTGGCAGCCCCGCGCACGCAGGGCCTCTGTCCTCCCGAGGCGGGGAGTTGCCTGGCTCGCCCCTCCTGCAGCTGTGGCCTCTGCAGACAGGGACGCAGGGTCCCTGTTTTCTCAGGCTGAGTCAGGCCATGGCCCCCTCCCCGCCCAGCCTGGCCTCTGCCGCCTCTCGCAGATTCGGTTGGTTCTGTGCCTCCCTCCTTCCCTTCCCGAGGTGCCCTGGCCACAGGCCCTGCCCTTGCTCCCGCATCTCCCGATGTGGCATCACAGAAGCCAGGCCTGCTCCCCTTTTTGTGGGGAGTCCAGGGGCGCAGGGGGCATGGGGTGGAGAAAGTCTTCCAGAGAAATACGTAAGCTAGTTTTTCTTCTATCAAGTAACCCTTTTCGTATTTGACTGAATTTTCCGGTAACTTCCCAGCCACTTGTTCAGAAGCTGTGAGTTTTGTCTCCTTCCCCACACTCCAGTCAGGAGCCATGGGAGGTGGGGTGCGTGCGGAGCACACCCCACTGGAGACCCCAGAGGCGGCATTCCCTGCTTCATCCTCTCACTTCCCTGGAACATTCTGGCACCTCCCTGCCCCACTTTGGTGGGCGGCGGGTCCTCAGGAACCTAGTGGGGCTCGGTGCCCCAGCCCGGGTCTGGCGGCCAGACAGAGACCCGGGACCGTCCAGCCCCTACCCTCTCCCACCTGCCTTCCTCCTGAGGAGGGCTCCACTTGGACGCCATTAGAATGGCGCCCCCTAGGCTGAGTAGCGGGAAACCCGAGCCCACCGGGGCCAGTGGACATTCCTGCGGGCCAGTGGTTGGCCTCCAGGGCTGTGATCGCAGAGGCCCTGTGGCGAGGGCAGCCGGCTTCCCACTGGCACACCCTCGGGGGTCTTAGGGACTGCTTCACTCCGACCTCTGACCCGGCCCACCCTCCTAGTGCTGCTCTCTAGGCCCCCACTGGGTCCGCGTCCCCAGGAACTGGCCTCGTTACTTGTAGCGGGCCTCGGCCCCCACCCCACACAGTATCAGGAGGATGGAGGCGGCTGCCTCGCCGGGAATTCACTGTTGAAGTTTCAGTGGCTTAACCACACTTGACCGTGGAGAGAAAAAGCAACTGAAGACATGACTTTTTTTTCTCGCATTAAAAAAAGTTAAATTGTGCTGAAG TCONS_00165385 TCONS_00163861 s 5' 0 TCONS_00165385 TCONS_00163861 s 5' 0 EMBV3_38370 TGGACACTCCCTGGAGATCACCTTGTAAATACTTGCCCGTTCACTCAGTACCTCAATGTC Gene GeneID:514777|BUB1:NM_001102011:65_cdna Constitutive 0 NULL GeneID:514777 11 GENE BUB1 MGC148432 budding uninhibited by benzimidazoles 1 homolog (yeast) EMBV3_36202 TCACTGAACATTCTCCTCCAGTGCCACCATACACCCCACCTACCCTCAAGCTTCGGAACA Gene GeneID:493644|CLCN5:XM_002700082:171_cdna Constitutive 0 NULL GeneID:493644 X GENE CLCN5 CLCN3 chloride channel 5 EMBV3_01544 ACTCCTACAGCATGCCTGTCAAGGAGGTAGAGAAGGAACTGTCCCCCAAGTCCATGAAGA Gene GeneID:534359|CLVS2:XM_002690069:23_cdna UTR3_Alt 2 NULL GeneID:534359 9 GENE CLVS2 RLBP1L2 clavesin 2 EMBV3_20620 GGGGACAGGAAGGATGAGGACAGAGCAGAATTCAAGGACCTGTTCGATCTGGAGAGTGAT Gene GeneID:508638|NOC2L:NM_001034326:79_cdna Constitutive 0 NULL GeneID:508638 16 GENE NOC2L MGC127410 nucleolar complex associated 2 homolog (S. cerevisiae) EMBV3_22996 CGCTCCACTCAAGAATGGTACCGCAAAGCAATATCCAAAGTCACGTTCATCAGGATGCAG Gene GeneID:615111|RNF150:XM_002694364:148_cdna Constitutive 0 NULL GeneID:615111 17 GENE RNF150 NULL ring finger protein 150 EMBV3_41955 CTCAAAACCGTCGTGCCTTGGTTGTCATGGCTTCAATACTTGAGCATTCCTCGATACGGC Gene GeneID:536203|ABCG2:NM_001037478:192_cdna Constitutive 0 NULL GeneID:536203 6 GENE ABCG2 MGC127688 ATP-binding cassette, sub-family G (WHITE), member 2 EMBV3_02521 AAGGTTCAGAGGAAGCAGGCACGGAGAGTTTGCAGCCAGTGGGCGTCAGCACGAAGAAAT Gene GeneID:616834|IRGQ:XM_002695080:502_cdna Constitutive 0 NULL GeneID:616834 18 GENE IRGQ NULL immunity-related GTPase family, Q EMBV3_40734 CCTGTGCAGAGAGAGGCCAGGTGATGCGATACCACACATGACGGGAGAAGGATAATGTAT Gene GeneID:510187|MGC155285:NM_001083660:79_cdna Constitutive 0 NULL GeneID:510187 12 GENE MGC155285 NULL Uncharacterized protein C13orf33 homolog EMBV3_01479 TATTTTTAGTGTATTAACTGTTTAACAAATTTTAAATATAACTGTTTAGAATGTCTGTAA Gene GeneID:513642|C5H12orf32:NM_001075631:19_cdna Constitutive 0 NULL GeneID:513642 5 GENE C5H12orf32 C12orf32 chromosome 12 open reading frame 32 ortholog EMBV3_14203 TCCGGAAGTCCATGCTTGTCCCTGCTTTTGCTTTGGATTATACCTCACCAGCTGCACAAA Gene GeneID:533264|SULF2:XM_002692494:599_cdna Constitutive 0 NULL GeneID:533264 13 GENE SULF2 NULL sulfatase 2 EMBV3_26990 TATGCCAATCAAGCTCAAAACACAGGAAACAGATCCACTCCTACAAAAATGAAACTTACC Gene BVT0102_024617 + 1 EMBV3_29002 GK000012.2:73190991-73516166 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037245 TCONS_00037247 TCONS_00037249 TCONS_00037243 TCONS_00037248 TCONS_00037246 TCONS_00037244 1 XLOC_021341 Coding TCONS_00037244 XLOC_021341 Coding Coding - 12:73312668-73497494 - TSS26929 2811 1 TCONS_00037244_1 302 0.255425115617218 8 0.984834302718788 0.000175093009004444 8.03922127492117e-14 0.00010206920633725 2.20541947190767e-09 1.94291292228878e-05 2.97186049781598e-15 0.000168489562294763 0.000705683207591091 0.000228987719768049 2.57615119745847e-08 6.97146601685769e-12 4.57163868141537e-17 2.29444947075856e-05 9.1021817327237e-11 2.68615310257776e-69 1.65229604915929e-28 2.86499963081239e-34 2.87008191710836e-19 5.84498753083268e-40 0.000347737819567671 2.19142208778337e-05 0 0 1.37931572992348e-60 5.34077249225852e-05 6.89204895511634e-07 1.09418738720035e-16 1.00178975306978e-14 0 1.05822818411998e-22 XR_236785.1 LOC101904517 PREDICTED: Bos taurus uncharacterized LOC101904517 (LOC101904517), 0.0 2937 100.00 0.578797580932053 XM_005254025.1 ABCC4 PREDICTED: Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (ABCC4), transcript variant X1, mRNA. 0.0 677 82.47 0.23834934187122 TCONS_00037244_1 sp|O15439|MRP4_HUMAN MRP4_HUMAN Multidrug resistance-associated protein 4; 1e-112 358 74.58 0.791390728476821 1 coding 0 0 1 1 0.224845104753035 0.341445769397516 0.0568783092573673 0.307703324293578 AATGGTTCTTGCAGACATAAAGATGGAAGTCTGAATAATGACTTGATTCTTCACCTATATGATATTGTCACATATATCTTTGAACCCCGGGAAGATTGGCCTGGTGCTCTCTCTCGCCCTCACGCTCACACTCACGGGGATGTTCCAGTGTTGTGTCAGGCAAAGCATTGAAGCTGAGAATATGATGATTTCAGTAGAAAGGGGAATTGAATATACAGAGTGTGAGAAAGAAGCGCTCTGGGAGTACAATTTTCAACCACCACCAGCCTGGCCCCATAGAGGAGTGATTGACTCTTACAATGTGAACTTCAGATACAGCTTAGATGAGCCTCTGGTAATGAAGGACCTGATACCATGCATATTCTCAAGTGAAAAGGTTGGCATCGTGGGAAGAACAGGAGCTGGAAAAAGTTCCCTCATCGCTGCCCTTCTTAGATTATCAGAGCCTGAAGGTAGAATTCTAATTGATGACATCTGGACAACTGAAATTGGACTTCACGATTTAAGGAAGAAAATGACAGTTGCACCTCAGGAACCTGTTTTATTTACTGGAACAATGAGGAAAAATCTGGATCCCTTTAATGAGCATATGGATGTGGAACTGTGGAAAGTCTTAGAAGAGGTGCAACTTAAAGAAGCCATTGAAGGTCTTCCTGGTAAAATGAATGCTGAATTAGCAGAATCCGGGTTGAACTTGAGTTCTGGACAGAGAGAATTGGTGTGTCTTGCTAGGGCTATCCTCAGAGAAAATCGAATATTGATTATTGACAAAGCCACATCGAATGTGGATCCAAGGTTTTGGATTCAGGGAGACTGGAAGAAGATGATGAACCATTTGTTTTGCTGCAAAATAGAGACAGTCTGTTTTACAAGAAGGTGCAACAACTGGGCGAGGTGGAGGCTGCTGCCTTCATTGAAAGGGCAAAACAGGTGCACACTGAAAGGAAATAGCCAGATATTACAGTGACCGTGTGATTATGAATATTTCCGGTGGACAGCCCTCAACCTCAACAATTTTTGAGTCAATGTTCTGTTTCTACCATGAGTTCATGTCTATTTCAAAGGCATTTTTCCAATAGGTTTTTGCACTGCATAAATATATTATACATTTTTTACACCAGCAACAAATATTTACATATTCCAAGATGTTAATCTATAATTTTTTCCTCCAACTTCACTCAGTGATTTCAAGCTCTTGCAAAATGATTTGTTATGTTTATTTATATGTTAAACTATTTTCTTTCTTATCCAAATCAGAAGTTGCAGGCCATCAATAAAAGCTGTCTCCCAGGTTTTGTGTCTTGAGAGACTCCAGAGCCAAATTGATTTTCTAAGATTTGAGACAAAGTTGTCACAGATTATTTTTTTAATATTCCCAGAATTACATGTTATTTCCAATTACATCAGGGATTCTGTTTACTTGAAGACTGTGTGAAGTTGCCATTTTGTGTAACCACTTCCTTTAACAGACCTACTGTCCATTTTTCCACTCAAAGACCTCTAGTTAAAATACTACAGAAAAAACTAATAGGAAAAACACACCTGTAGTTTAAATGACATTATAGAAGAGAGAGGTATCACCCTCCAAAAAGAAGTATGTTTAAAATACAGAGGGACAATATTATGTGTTCTTCTCCTGTGTCTCCTGCATTGCAGGCAGATGCTTTACCACTGAGCCATTGGGGAAATCCTCTAAAAGAGAAGGAAGAGAAAATATGTTTTATCAAAGTAGGAACTCTTCCAGGGTATTTGCTAATGAAGGACAGCCATGTTCTAGACTGTCTTCTAGATAGAAGATTTTATTTTTTTACATTTTTAAAAAATTGTGGTGAAGTATATATAGTATAAAATTTGCCATATAGCCATTTTTGATCATACAGTTCAGTGGCATTAATCACATTCACAGTATTGTGCAGCCACATTGTCTGGGTAACTTTTGGTAATTATGTGCTTCCTATTAAGTGTGTTATTTCTGCAGAGTCATTTTGGTAAGTTTCATTTTTGTAGGAGTGGATCTGTTTCCTGTGTTTTGAGCTTGATTGGCATAAATGTATTCACAATACCTTATATATTTAAACTACAGCATCTCTGTGTTGTTTGGGCTTTTTAATTTTCTTTGAGCCTTCTATTTTTTATTAATAATCTTGCATAACTTTTTTCCTTTTTTCAAAGAATTAGCTTTTTGCTTGATTGATGCTTTCTATTTTGTTTTTCTTTCCCTAGCTCATCATATCATTCTTTCCTTAAACTTTTCCTTTACTTTCATAATTTTTTCTCTAAATTCTTAAATTGGAAACATATTAATAACATCATTATTTTTCTAATATAAGTATATAAAGCTGACATATTTTTCTGAGATCCACTTTAGCTGCAACCTGCAAGTTTTGATACTTACCACCAATCACTAGCCATAGTATTATGTATTTTCTAATTCCTAATTTAATTAATTAACTATATCTTTTACCTATGAGTTATTCAGAAGTGTAATGTTCTCTAAATTTTAAATGCTAATGGATTTTTTCTATTAGAATGAATTATGTCAAACTGCTAACATTCAGTCTTTTTATAAGCTATAAAATGGCACTTTCATATATTCTAACATAATAGTTTTCTTTTATTACTATATAACTTAATTTCATTTTGATCAGACAATGTTAGATTGTGGATTTTAAACCAAAGGTAACCACATTCACACAAAAAGTCTATTTCTACCATTTTGTGTTTTATTTGGGGGTTTTAAAATGTTATAAATATGTGTGTAATTAGTAATTTTCAAATAAAAGTCCTCCCTGAGTACTGGAATGCTTTCTG TCONS_00037249 TCONS_00037250 TCONS_00037246 TCONS_00037246 TCONS_00037246 s 5' 0 TCONS_00037249 TCONS_00037250 TCONS_00037246 TCONS_00037246 TCONS_00037246 s 5' 0 EMBV3_28903 GATCACTTTGTATGTGACTCAGGCCCACTGCTGACCCTTTCATGTGTTCCTGCTCCCATG Gene GeneID:784455|LOC784455:XM_002690678:270_cdna Constitutive 0 NULL GeneID:784455 10 GENE LOC784455 NULL similar to olfactory receptor Olr1615 EMBV3_31464 AACCTGAAGCACCAGCCAGGAGGTGGCAAGGTGCAAATAGTCTACAAACCAGTGGATCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12899 CTGTGCAGCCAAGCCCTGTGTCAAATCAGTCACTTTTATCAGAATCAGTAGCGTCTTCCC Gene GeneID:514167|ZFAND6:NM_001034460:33_cdna Constitutive 1 NULL GeneID:514167 21 GENE ZFAND6 MGC127770 ZA20D3 zinc finger, AN1-type domain 6 EMBV3_20520 AACAGCTAGTCAGAAAGCCCAAGAAGCCCTGTGCACTGAAGACATGAGAGGATCCAGTTG Gene GeneID:512705|TDRD6:XM_002697267:18_cdna Constitutive 0 NULL GeneID:512705 23 GENE TDRD6 NULL tudor domain containing 6 EMBV3_41348 CCTCATTTGGTCAAAGTGCTGCTCGATTCACACAAGACTCTAGGACAGAGAAAATGCCAG Gene GeneID:517517|LOC517517:XM_002688130:16_cdna Constitutive 0 NULL GeneID:517517 6 GENE LOC517517 NULL similar to Chromosome 4 open reading frame 37 EMBV3_36984 CTGTTGAGATCTGTCTTAGGGCACAGCAAAAGGACCAATTTTTTGATAAGTGATTCCATG Gene BVV0102_398356 - 1 EMBV3_12158 GK000005.2:116897166-116948624 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05253 AACGATATGGCACTCTGGGGTAAATCTGAGGGATCCTGGGTACGTCTTACATGGACCTTG Gene GeneID:540693|AP1S3:NM_001103296:166_cdna UTR3_Alt 2 NULL GeneID:540693 2 GENE AP1S3 MGC157206 adaptor-related protein complex 1, sigma 3 subunit EMBV3_41533 GACATTGTGTCTGCGAGAAGAAATCCAATACTCCAGCACCGCAGCCAATGAGAGACTGTC Gene BVV0102_141357 + 0 NULL GK000010.2:102982281-103046364 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015531 TCONS_00015530 1 XLOC_008506 NonCoding TCONS_00015530 XLOC_008506 NonCoding NonCoding - 10:102992815-102994273 - TSS10945 752 1 TCONS_00015530_2 84 0.498670212765957 2 0.485243651338367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000113993143226885 0 0.00498814880651151 0 0 0 0 0 0.000579627957082655 0 0 0 0 0 0 NM_174038.3 DMP1 Bos taurus dentin matrix acidic phosphoprotein 1 (DMP1), mRNA. 3e-88 329 83.59 0.425531914893617 0 noncoding ACAAGGACATCAAACCAGTCAATCCTAAAGCAAATCAATCCTGAATATTCACTGGAAGGACTGACGCTAAAGCTGAAGCTTCAGTACTTCGGCCACCTGATGCGAAGAGCCGACTTGTTGGAAAAGCCCCTGAGGCTGGGAAAGATTGAAGGCAAAAGGAGAAGGGGCGGCAGAGGATGAAATTGTTAGATAGCATCACTGACTCAGTGGATATGAATTTGAGTGAATTCCAGGAGATAACAGAGAAGAGAGGAACCTGGTGTGCTGCCGTCCATAGGGTCTCAAAGAGGTGGACGTGACTTTTCAACTGAGCAACAACAAACCTTAGGAAAAAGACAAGGAAGAACTGTCTACTAGAGACCCCAGTAGAAGAACCATCAAGAAGGAGCCAGCAATTACATGTGCCAATAGGAAGAAGACAGACATTGTGTCTGCGAGAAGAAATCCAATACTCCAGCACCGCAGCCAATGAGAAACTGTCCTTCCCCCAAACTCATACTGTTCTCTGATTGTATGTTCTCTCATACTGTTCTCATACTGTTCTCTAATTATTGTTGTTCAGTCACAAAGTCATGCCCAGCTCTTTTCGACCCCATGGACTACAGCGAGCCAGGCTTCCCTGTCCTTCATTATCTCATCCACCCCTCCCAGTGTCCGCCTTTTCCCTATAAAATGACCTTCCTCCCCTTTGTTTATTGGACTTACATATGGCTTTGGCTATAGCTTGCTTGTCCCGAATTGCAGTTCCTCCT TCONS_00018563 r 5' 10425 TCONS_00018563 r 5' 10425 EMBV3_08213 AGCCAGACAAGAGCTACATCCGGCAGCCAGGTAATAATTTCAAGATGCCGGGGCGTTCCA Variant GeneID:519974|NSMCE2:NM_001075797:38_cdna 96^201 3 EMBV3_01216 GeneID:519974 14 GENE NSMCE2 NULL non-SMC element 2, MMS21 homolog (S. cerevisiae) EMBV3_26279 AACTGCCTGGCTCTTGATGGTCATTGGGTTCTCTATGGTCTGCTGGGAGGAGCTGTCATC Gene GeneID:508875|TP53I3:NM_001075378:93_cdna Constitutive 0 NULL GeneID:508875 11 GENE TP53I3 MGC142694 tumor protein p53 inducible protein 3 EMBV3_11542 ATCACTGTTACATGGGGAAGCGGTTCTTGGGCCAGATTTAAACTCATCTCTGTCTAGAGC Gene BVT0102_112006 + 0 NULL GK000010.2:28439038-28441592 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013331 TCONS_00013330 TCONS_00016591 TCONS_00016594 TCONS_00013327 TCONS_00016592 TCONS_00013333 TCONS_00013332 TCONS_00013328 TCONS_00016593 2 XLOC_008095 XLOC_008870 Coding TCONS_00013331 XLOC_008095 Coding Coding SLC12A6 10:28378876-28441690 j TSS9926 6334 1 TCONS_00013331_9 1086 24 0.899543088214223 6.44694008618832e-19 8.19677276798949e-10 0.00051301654520625 1.44776039626254e-07 0.000233638239951896 1.05507603421805e-14 2.14034354619923e-35 5.97312636944473e-13 0.000204010741080173 1.38773851516623e-20 4.06727380414725e-24 0.000183038873522584 8.27124820759967e-07 1.32978411211389e-131 8.47747476150578e-10 0.00695686758136633 0.00630228851901506 0.00254164782652182 0.000165546108781523 3.25248638254055e-07 5.40298909562608e-83 0 0.00279334847714617 0.00465623093248601 7.90651592705471e-07 0.000572552849025608 9.99054618525661e-05 0.00101982520145574 0.00035268247065836 0.00168200608807095 XM_005211497.1 SLC12A6 PREDICTED: Bos taurus solute carrier family 12 (potassium/chloride transporters), member 6 (SLC12A6), transcript variant X5, mRNA. 0.0 1.134e+04 99.29 0.999842121881907 XM_005254820.1 SLC12A6 PREDICTED: Homo sapiens solute carrier family 12 (potassium/chloride transporter), member 6 (SLC12A6), transcript 0.0 5368 84.45 0.747395011051468 TCONS_00013331_9 sp|Q9UHW9|S12A6_HUMAN S12A6_HUMAN Solute carrier family 12 member 6; 0.0 2162 98.86 0.966850828729282 3 coding 0 0 0 0 -0.225645463322811 0.0903961158523839 -0.00320463992800037 0.944665443646635 GGTTCCCCTCCCTTAGGGCCGTAGGTCACGTGAACTGAAAGTACTTCCCGATTCCCTGCCTGGGTCTCCCGTGGGCAGTGATCAGAGTCAGAAAGGGGCACAGCAAGGAAGTGATAGGCAGCGAACGTAGACTGGAAGGAAGCAAACACAGGGAGAGCACACGTTCCTAACTAGAGCGATGCCACACTTCACAGTGACTAAAGTAGAGGATACGGAGGAGGGGGCAGCAGCTCCCGTCTCCCAGGAGGGGGAACCCAGCTTAGCAGAAATAAAAGCCCCGATTCAGCATTCAGATGAACCAGATGATGGACATAAGAAAGCGCGAAATGCTTATCTTAACAATTCCAATTATGAAGAAGGAGATGAATATTTTGATAAGAATTTGGCACTCTTTGAGGAAGAAATGGACACCAGACCAAAGGTGTCTTCTCTCCTTAGCCGCTTGGCCAATTATACTAATCTGACACAAGGAGCAAAGGAACATGAAGAGGCAGAGAACATCACTGAAGGGAAAAAGAAGCCCACCAAGACTCCCCAAATGGGTACCTTCATGGGTGTCTACCTCCCATGTCTACAAAATATTTTTGGAGTGATCCTGTTTCTGCGCCTCACATGGGTGGTGGGCACAGCTGGAGTTCTGCAGGCCTTTGCAATTGTCCTTATCTGCTGCTGCTGTACGATGTTGACTGCTATCTCCATGAGTGCCATTGCCACTAATGGAGTGGTGCCAGCTGGAGGCTCATACTTCATGATTTCCCGAGCACTGGGCCCAGAGTTTGGTGGAGCTGTTGGCCTCTGCTTCTATCTTGGTACCACATTTGCAGCAGCTATGTATATCCTTGGTGCCATTGAAATATTTCTGGTATATATCGTCCCTCGAGCTGCCATCTTTCAGAGTGACGATGCACTCAAGGAGTCAGCAGCCATGCTAAATAACATGCGTGTCTATGGGACAGCCTTCTTGGTCCTCATGGTATTGGTGGTATTCATCGGCGTACGCTATGTGAACAAGTTTGCCTCACTCTTTCTGGCCTGTGTCATTGTGTCCATCTTGGCCATCTACGCTGGAGCCATCAAGTCTTCTTTCGCACCTCCACACTTCCCGGTCTGCATGCTGGGCAACCGCACCCTTTCATCAAGACATATTGACGTTTGCTCAAAGACCAAGGAAGTTAACAACATGACAGTGCCGTCAAAGCTGTGGGGCTTCTTCTGTAACTCAAGTCAGTTTTTCAACGCCACTTGCGATGAGTACTTTGTTCACAATAATGTCACTTCGATCCAGGGCATCCCTGGATTGGCTAGCGGTGTCATTACAGAGAATCTTTGGAGTAATTATCTACCAAAGGGAGAGATCATTGAGAAGCCCTCAGCCAAATCTTCCGAAGTCTTAGGCAGCTTAAACCATGAGTATGTCCTTGTGGACATCACCACCTCTTTCACTCTTCTGGTGGGCATCTTCTTTCCCTCTGTCACAGGCATCATGGCAGGATCAAACAGATCTGGGGATCTGAAAGATGCTCAAAAGTCCATTCCCATTGGCACTATCCTCGCCATCCTGACCACCTCCTTTGTCTATTTAAGCAACGTTGTCCTTTTTGGTGCATGTATTGAAGGTGTTGTCCTCAGAGACAAGTTTGGAGATGCTGTGAAAGGTAATCTGGTGGTAGGAACCTTATCTTGGCCATCCCCGTGGGTGATTGTTATTGGCTCCTTCTTCTCCACATGTGGGGCTGGACTTCAGAGTCTCACAGGAGCACCGAGGCTGCTACAGGCTATAGCCAAGGATAACATTATACCCTTTCTGAGGGTTTTTGGTCACAGCAAAGCCAATGGGGAACCTACCTGGGCTTTACTTCTGACTGCTGCCATTGCAGAACTGGGAATCCTTATTGCCTCCCTGGATCTCGTGGCTCCAATTCTTTCCATGTTTTTTCTCATGTGTTACCTCTTTGTGAATTTGGCATGTGCCTTGCAAACATTGCTTCGAACACCCAACTGGAGACCCCGGTTCCGCTACTACCACTGGGCACTCTCTTTCATGGGAATGAGTATCTGTCTGGCTCTGATGTTCATTTCTTCCTGGTATTATGCCATCGTAGCTATGGTAATAGCTGGTATGATCTACAAATACATCGAGTACCAAGGAGCTGAGAAAGAATGGGGTGATGGTATCCGCGGGCTGTCCCTCAGTGCAGCCCGATTTGCTTTGCTTAGGCTGGAGGAAGGACCACCACACACTAAAAACTGGAGGCCTCAGTTGCTTGTATTGCTGAAACTAGATGAAGACCTACACGTCAAGCATCCTCGTCTCCTCACCTTTGCTTCACAGCTTAAGGCAGGAAAGGGTCTCACAATTGTGGGCTCTGTCATCGTCGGGAACTTCCTGGAGAACTATGGTGAAGCGTTAGCTGCTGAGCAGACCATAAAGCATTTAATGGAGGCAGAGAAGGTGAAAGGGTTCTCACAGCTGGTGGTGGCCGCCAAACTGAGGGAGGGCATTTCCCACCTCATCCAGTCGTGTGGCCTTGGGGGCATGAAGCACAACACAGTGGTGATGGGATGGCCAAATGGCTGGCGCCAGAGTGAAGATGCTCGAGCTTGGAAGACTTTTATTGGCACAGTTCGAGTGACAACTGCTGCCCATCTGGCCCTGCTGGTGGCCAAAAACATCTCCTTCTTTCCGAGCAATGTGGAGCAGTTTTCTGAGGGCAACATTGATGTGTGGTGGATTGTACATGATGGGGGGATGCTCATGCTATTACCATTCCTACTGAAACAGCATAAGGTGTGGCGAAAATGCAGCATACGGATCTTCACAGTAGCCCAGCTAGAAGACAACAGTATTCAGATGAAGAAGGACCTGGCCACCTTCTTGTATCACCTTCGCATTGAGGCAGAGGTGGAAGTGGTAGAGATGCATGACAGTGACATATCCGCATACACTTACGAGCGCACCCTGATGATGGAGCAGAGGTCACAGATGCTGCGGCACATGCGCCTGTCCAAGACGGAGCGAGACCGAGAGGCACAGCTGGTGAAAGATCGGAACTCAATGCTACGACTGACCAGCATCGGCTCTGACGAGGATGACGAGACAGAGACTTATCAGGAGAAGGTGCACATGACGTGGACGAAAGACAAGTATATGGCGTCTCGGGGACAAAAGGCCAAGTCAATGGAAGGGTTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCATACAGCAGTGAAGCTCAATGAGGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGTTTTGTTGAATATGCCAGGGCCACCCCGAAACCCTGAGGGTGACGAAAACTACATGGAGTTCCTGGAAGTACTCACTGAAGGACTAGAGCGAGTCCTTCTTGTCCGAGGTGGTGGCAGTGAAGTGATCACCATTTATTCATAATCTACTCCTGAATGGCTCTGCTTGGCCTCACCTTCTGAAAAGGATTCTATCCTCCATGGAAGTGCCAGCTCTTCATTACCACTCCCATCAACTAGAGACCTGCATTCTGTATACATCACACTGAACTCTTAATGAGCTGAGCCTCAAGTCCTTGTGCAAGAAAGTACAAACCGATCTGTTCTTCGCTACCATATGACCTGCTGTCCTTAAAGAAGTAGATCTTCCCTCAACATCAGAACACTGCTCAAGGCCTGCAAGCCATGCCTGTTCCAGATGAAGGCAATTTAGGATGAACAAACTAAACCAATAAAATAAATTGGTAAAAGAGATGCTAGAAAGTCAACTGAAGTCAAAAGGCAAATACACAAGTACACATCTGAAATTAAAGATGAGTCTTAGAAGTCATGATTCAAGATGGCACCATAGGGGTAACAGCCAGAGACAGCCTCATCATACTAAGGAATTCATGGCCAAGTACATGGGGGTCTTACATCTTTGTGTAGGTAACTGGCAGGCCAAGATGAAAATTTTCATCAGTGTATCCACTGCTCTCTGGGACTCTTAATTTTATATTAGGGTACTAATATGTAAAAACTGAAACATGAAACTGCAGCCTCTACTTCCTCCGAAACAAGATTCCCCCAAAATATGTTTAGGTACACATACTATATTATATATTTCGGCTGTTTTTCAAAACCCATTCTGTGGTTAGGATTGTAATACAGGCACTGTTACCATGGAAATTGTTCTTTAGAAGGCTGAGTAAAAATTCTTTCAGGTTCTTTTCAAATGGACAAACAAAGGGAACTCCAAAAGTTATCTATCAAGATCTGGATAAATACAGTCTGTAGTTACCTATGTGATATAGGCAAAATACATAAGCTGTTATCCAGGAAATATAGATGATAATGCATATTGACCAACAGATTCTCCTTTCCTTCTCCCTTTTATGTCCTCTGGATTATAGGCACAGATCAAAAATCATAGTAACAAACGCTAGGAAGACTGGCAAAAATCCTTCCCTAAACCTTTGGACTGTCCTTCAAAGGGGGAATCCAGCAGTGGAATTTGAAGTTTAGAGCCATACTCCTTCCATAGTGCCAAAGTTACTGAGCTGCTGCTATTCTTCTTACCTGCTTCACTGAAGTGGTGTAACTGGCAATGGCCTGATTCAAGAAACTTCTTTAAGAAACCTGTGGACTTACTCCCAAAGCCATAGTGAAGACCTGAGGCATGCGCCTCAGTGCTCAAAGTATGAGCTTTTTTTTTTTTTTCAATTCCTTATTCTGACTGCAGAAACTTGGATCTGAACTAAAAAATTATCCAATTTTGCTATGTTTTGTTTTCAGAAAACTCAAAATGTGTCAAGAAAATACTTGTGCAAACTTCACTAATTTGCTAACTTAATGATCACAAAACATCTGACTTTGAAGCATAGGTAAGCTACCCTGTGTGGCTGAGTGGTAATTTTATGTGAAGTCTTCATTTATTTTACAGGATAGATAGGGTATTTCAAGAAACTATCTTGCCTGTATTCATGGCTGCTTTTGAAATTCATTTTATGAATGATAAATAGTGCCAGTCTTTGATTACCAGTAGGACATGGAGCAAGCTGCTTTGCTCCATAGTCTGCAGACTATTTTTACCCTTATGGACAGAGGAGAAAAACCCTTCAATATGACTTAAGAAATTTGAGTTATTTTAATTTATTCCCTTTCCTCTTCTTTAAATCTCCAAGCTTAGTCAGGTAGCATGTTGTAAGTTTTGTTTTTTTTTTTTCCTGCTGCTTCCTGCAGAGGGTAGAAGCATTGTTTACAACTTCCATTGCAACACTCCATTGCTAAGTTGAGTCCGGCAGTAGCAGAACAAGCCCCCGAGGACCCAAGCTATTAATGACCCATGCTCTAAAGTCAGCTTGCCCAGGAATTCCTTTATATTTACACCCTCTGGCCAAAGTGATACATGTATATGTATTCTTTTCCATATAGAAAAAACGTGGGCAGAAAATAAGGTTAGTTTTTAGAAGAGCCTTTTGTGGCTGGAGCTCTGTAAGAATCCTTTAAAGGGATAATGGAATTAGTGGCTGCTAATATAGCCCCTACTGCGCCCCTAAAACAATCACTGTTACATGGGGAGGCGGTTCTTGGGCCAGATTTAAACTCATCTCTGTCTAGAGCATTTCATGTCTACAAGTCACTTATGTTGTCTGCAAAGCGTCTTGTCTCTTAATCACTGCAAATAAAGCAATACTGAAAACTTGACAAGAGAATGCATCTTAGGGGAGGGGGCTATGTGTTTTAAGCAGAAAGAAAAAGGAAAGACATCTTCCTGCTTTTTGAATGAGATCCAGCTTTTAAGTCTTAGCTGTGACTTTACCAGGGCAGGTTATGACAATATTCATTTTCTAATTGCTGGCCCTCTGTGTTGCATAGCTATCTTAAAACTGAAGTTTGAATCGCAGCATCTGTTTGACAGGTTCCCAATTCCTCTCGGCGGGGAACATCACCACTTTATATCTTCCGTTGCCTCCGATTCCTGTTGCCCCAGCAATCCTGCCAATCCTTACTCCCCCAAACGTGTTAAAAATCCATTTTTGTGGATATTAAAGTAGTTATTACACTGTAAGCATTTTATGCGCTTTTTTGGTCTGGTTTATTTTTCTTTTCATCATGTACAATCTGAATTCACATCTTCCACAAGTATCTCCAACGGAATTTTTATGTCCCAGCTTGTGTTAAATAGAAGTGAAATATTAAGAAGAATAGATTTAAGAAAAACTTGTGCAACTTTTTTTTTAGTATTGTTCTCAACCATTTAATTTATTAAAAGGAGATGCTGCTGTGGTTCTTGATTTAACAACAACCATTCTTTTGTTTACATAGTCATGGTTTTATT EMBV3_03282 GCACCACCAGTTCATCAACAACGGGAACATCTGCACCGGGGACCTGGAAGTGATAGAGAA Gene GeneID:515209|LOC515209:XM_002689869:1_cdna Constitutive 0 NULL GeneID:515209 8 GENE LOC515209 NULL similar to plasticity related gene 3 EMBV3_10297 TAGCAAAACCCGTTCAACAAAGGAGTCTGTGTCCGTCCTCAACCTCTTCACTAGGATCCG Gene GeneID:530333|FZR1:NM_001037609:45_cdna Constitutive 0 NULL GeneID:530333 7 GENE FZR1 MGC133845 fizzy/cell division cycle 20 related 1 (Drosophila) EMBV3_30740 AGTAACTACTGTTCCCGTGGAAGGGTTAACAGCGTAGGGACTGGTTTATCAGCTCGCCTT Gene GeneID:615761|KCNE4:NM_001081543:181_cdna Constitutive 0 NULL GeneID:615761 2 GENE KCNE4 MGC155174 MiRP3 potassium voltage-gated channel, Isk-related family, member 4 EMBV3_36941 TCCCCCACCAAAGCTGTGGAAAACCAAGAAGCCTTGAAGACCTGTGCATTGGTCAGCCTT Gene GeneID:100295976|LOC100295976:XM_002687287:184_cdna Constitutive 0 NULL GeneID:100295976 5 GENE LOC100295976 NULL hypothetical protein LOC100295976 EMBV3_22081 CCCAGCATGAGAGGGATGTGATTTATGAAGAGGAATCAAGGCACCATCACAGCGAGCGCA Gene GeneID:541192|SATB2:XM_002685496:247_cdna Constitutive 0 NULL GeneID:541192 2 GENE SATB2 NULL SATB homeobox 2 EMBV3_28191 CGTGGGGAAGAATGAAAAAACCAAAATCATCGTCAAGATTCAGCATAGGGGCCAGGGAGC Gene GeneID:535482|C1H21ORF59:NM_001046407:43_cdna Constitutive 1 NULL GeneID:535482 1 GENE C1H21ORF59 MGC134342 chromosome 21 open reading frame 59 ortholog EMBV3_02871 ACTCTTGGTCTAACCACAAGGTCCAGTGGGGTGTTTGAAGGGGCTCAGTTTGAGTCTGGA Gene BVV0101_002156 + 0 NULL GK000019.2:39852766-39912108 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10770 ATCCACCTCCTGCCCTTGCTCTTCTGGTCTTTCTGGCTGAACTGGGTGCAAAACTGTACT Gene BVT0102_175983 - 1 EMBV3_27670 GK000028.2:13698278-13889607 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161541 1 XLOC_098429 NonCoding TCONS_00161541 XLOC_098429 NonCoding NonCoding - 28:13873453-13873789 - TSS120873 336 1 TCONS_00161541_1 54 1 0 0 0 0 0 0 0 0 0 0 0 6.81305483850316e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000332309355545564 0 0 noncoding 0 0 0 0 0.0712107816179433 0.528364598351375 0.0229475489953967 0.659392680480273 GCAGTACAGTTTTGCACCCAGTTCAGCCAGAAAGACCAGAAGAGCAAGGGCAGGAGGTGGATCAGAGGTGGGTAGAAGCACAAATTTCCTGGGGCTGTGCAAGGTGCCCAAAGGACTGCTTTCACAACCTCCAGGAGCATCAGAATGAGGAAGCTGGAATGCACAAGGGAGAAAGGAATGTGAGAGGAGCAGCACCTGGGGAGGCCAAGGCAGGGCTGGTGGAGGGCACCCACAGGGCTTTGGACGAATGTGTCCTGAAGGCCCAGACCCAGGGGCAGGGTGGAGCCCGGGCTATGTCTACACAGCTCCTGGATGCTAAATGAGGGCTAGAGAGAG TCONS_00159090 . 5' 15819 TCONS_00159090 . 5' 15819 EMBV3_27296 CCAAAGAAGGGATGACCTGGGCACATCTACCTGCCACCACCGTGCACGGGTGTGCCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42642 ACCTTCCAGGCCCAGATGGTGATGGTGATCAAGAACCCCAAAGGCGAAGTGGTCGAGGGT Gene GeneID:528165|TIMM44:XM_002688863:222_cdna Constitutive 0 NULL GeneID:528165 7 GENE TIMM44 NULL translocase of inner mitochondrial membrane 44 homolog (yeast) EMBV3_40335 AAACCAGCTCATCAAATACGAACAAGAGCAGCTCAGCCGTGCAAACCAGTGTCTGGCCCT Gene GeneID:514910|FAM81B:NM_001075688:5_cdna Constitutive 1 NULL GeneID:514910 7 GENE FAM81B MGC151951 family with sequence similarity 81, member B EMBV3_03883 ATACTCACCCTGGTGGATGATACACTGCAGGCAGCAAGAATTATTGCCAAGTTAGCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16678 CCCGGGGACCTAGTGCCACACCGGTAGATTGTTCACTATGTGGTAAAAAAGGAAGATATG Gene GeneID:616408|SPDYA:XM_002691449:276_cdna Constitutive 0 NULL GeneID:616408 11 GENE SPDYA NULL speedy homolog A (Xenopus laevis) EMBV3_43552 AGAGGCTCTCCTTTGCCCGGCTCTTCTACCTGCAGCCGAAGTATGCAGTGCTTGATGAAG Gene GeneID:528646|ABCD4:NM_001015636:139_cdna UTR3_Alt 4 NULL GeneID:528646 10 GENE ABCD4 NULL ATP-binding cassette, sub-family D (ALD), member 4 EMBV3_27849 GTGCCCTCCTTCACACTGGTTACACGTTAGGGCTTTCGAGTCACAGAGGTTGCTTGGTAT Gene BVT0102_421639 + 0 NULL GK000016.2:67278875-67318503 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00421 GGCTGGAGATTTTCGTGGCCTGCATCATCTTCGCCTTCATCAGCAGCCCCCATCTATATG Gene GeneID:515149|LOC515149:XM_002696562:156_cdna Constitutive 0 NULL GeneID:515149 21 GENE LOC515149 NULL similar to myeloid-associated differentiation marker EMBV3_40593 GATAGTCACGAGAAAGCTGCACAGCATCAAATGGGCACATGTTGGATTCAACAAGATATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23507 GGACCAGATACTTTCCAGGAAGAATGTAAGTTTCATCTCTCGAACATCTTCAAATCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18641 CACTGTGTGATTGGCATGTGGTCATGGGCAATAGTCATTGGAATCAGGAAGAAGACTGAC Gene GeneID:780867|C5orf28:NM_001079795:2_cdna UTR3_Alt 2 NULL GeneID:780867 20 GENE C5orf28 MGC139853 transmembrane protein C5orf28 homolog EMBV3_43533 CACGGGATGAAGACATCTGACACCATTATCGGCTACGGCCTCTTCGGACACTGCATTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24090 CCAGTAATTTTTAGGGAAGAAAATCTTCAGAGTTGATGATGCCGCCAGCTTGGTCCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33564 GCAAATTTTGATTTTCCACTCTAGAACCGGTATCTAGATCACCATGGCAACTGGACAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11424 TTTCGCCATAACTAGAGCAAAAGCCCACACACAGCAATGAAGAGCCTGTAGGTGCCAGGA Gene BVV0102_241815 + 0 NULL GK000022.2:32691751-32698748 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126675 TCONS_00126676 TCONS_00126674 TCONS_00126677 TCONS_00126673 1 XLOC_077479 Coding TCONS_00126675 XLOC_077479 NonCoding Coding FAM19A4 22:32692912-32770428 j TSS94934 2657 3 TCONS_00126675_3 74 0.412118931125329 3 0.965761465522802 0.000939980758662307 0.00118114599298273 0.00123947220880337 0.000246046720199853 0.000477431082474482 0.000299081852967251 0.000462976980530731 7.83742822462276e-05 0.000100162488137004 4.02566712251194e-06 0.000138509772075332 0 3.72810597000139e-06 4.59756027416569e-05 2.95624903281353e-83 0 0 0 0.000614694518812998 0.00128495705765789 0.000370036134243503 0 0 6.81647817560803e-48 0.000752662423099067 0.00115965857977285 0.00146873845196168 2.2190202240497e-05 1.82709891297131e-06 2.26279072189257e-06 XR_232761.1 LOC786451 PREDICTED: Bos taurus F-box only protein 16-like (LOC786451), 1e-93 349 88.03 0.106134738426797 0 noncoding 1 1 1 0 -0.0754231565674398 0.519617146837416 0.0488177001156311 0.361298716914683 CTCCGGAGGGTTGTATTCTGCAGCAGGGCAGCTCTATTCAGCTGAAGGCAGTTCCTGGAGAGGAGCTTGGTGTGATCCATCAGTGGGGACGCAGGTTCGCTCCCTGCTCCGGGAGCTGAGATCCCACCTGTCATAGAGCAACTACGTCTGCGTGCCCCACAATTATTGAGCCTGCGCAGTACAGCCCTAGCGCTGCAACTACTGAGCTTGCGCCCTGGAGCGAGGACCCACAACTGCTGAGCCTGCGCTCTGGAGCCGCAAACCACAACTACGGAGACTGCATGTGCAACTGCTTAAGAACACATGCCCTAGAGCCCGTGCTCCACCAGCAGGAGAAGCCACGCCAGAAGGCCGAGCACCACAACTAAGGACTAGCCCCTTTCGCCATAACTAGAGCAAAAGCCCACACACAGCAATGAAGAGCCTGTAGGTGCCAGGACCCAGTGCAGCCCCTGCTCCCCCACGAACGTCTGCGCTCTTGGTGAAAGTAAAGACCGCCGGTCCGGAACCCTACAGAAAGGTTTGGACTTGTTGGTTCCTAGTGACTGGCATGGTGATATGCATGGTCACCCTTGGTGCTAAGACATTGTAGCAGACTCAGTGCTGACTCTTCTGGGCTGTCCATTGGAAGTGGCCGCATAGGACCCGGGGATAACATCTACTTCCCCTACTCAGTTCAGACTTCCTGAGATTGCCACCCCCACCCCCCAACCCCCATCCTCTGCAGGGAAATGATGTCAGGCAAGTGCAAACACATGAAGTCTTAGGACATAAAGTAGCTTTGCAGAGCCATGATGAGGAGCAGGCTGGCAGAGCAGTGGAAGGGACGGACTCTGGCCTACCATTGACTACCCCAGAGACCTAGGGCAAGCCACTGACACTCAGGGAGCCTCAGTTTTCTCATCTGTGAATGGACACTACTCAGGGGACCAACCTGAAGGTTGTTGTGAGGCTGTATTTGGTCCTTGTATCTGCATGGCACCTCGTGGCACAAACAACTGTGAGGATAGAGGAGCCTGATCTCAATCAGGTAATCACGCAGGTGAGGGTGTGTAAGGATAAACAGTGGGGCTGCCTGGAAGGGGAGGATCTTGTAACCAAGAGATGCCGTGCCCTGGGGTGAGAGGGAAGGTTCCTCGCAGGCAAAAATAAGGTAGCACACCTGGGGTCTGGCAGCCAGGGAGGATTCCTAAGCTGTGAGAGGAGCTGGGAGGTGGAAGGAGGAGGATAGGAGGCAGATGACGAGGAGGAAGAAGACGCAGACCCACAGGAAGCCTGGGTCCTCGGCCCGTGAGCACCGGAGAAACCTCCAGGAGTTGACAACTTGAGCCTGAAAGACCCTGAGGACAGTGGCCGCTGGGGTCTGCTTGATTCAGTGATGGACTGACAGTCCTGTGAGGTGGAAAAACTCCTGGAGACCAAGCGGCCCCCAGACAGAAGTTGCAGAGGTTCCAGGGCTATCAGACTTGAACTTTGCTTCCCACTGAGTGGTTTCGTCAGCATCACCTGAGAACCTCACCAACGGCAAAGGCCTGCCAGCCAGCCTGCCTTCTCCTGGCCTCAGAATTCTCAGCTACCTACATCCGAACTTCGCTTCTGCCCCTTCAGTCTGAGATTAAAGGGCAAAAGTTACCTTCCAATGAAGATTCATTGGAAGGACTGATGCTGAAGCTGAAGCTCCAATACTTTGGCCACTTGATGCAAAGAGAAGACTCATTGGAAAAGACCCTGATGCTGGAAAAGATTGATGGCAGGAAGGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCATCCTTAACTCAATGGACTTGAGTTTGAGCAAGTTCTGGGAGATGGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCCGTGGGGTTGCAAAGAATCAGACACAACTGAGTGACTCAACAACAACAGTTCCGTTATTCACACTTGTTTACCTGTCTGTCTGTCTTCCCACACTATAGTGCAAACCCCAGGGTACCCGGGACTTTATCCATCATCCATGCCTGGCACCCAACACAAGACCTGGTTCAAGAACTGATCAAAAACTACTTGTTTAAGGAGTCATGAAGAGGTGACCCACTGAGTGTGGATAGGACCTGGGAGACTGCTCACCTGTTCTGTATGACTTCCGCATGGGGTCAGCCCACCATACCTACCTCCTCTCCCTTCCCCCTTTCTCTGTGTGGTTTCCTTTAGTGGCCCTTTCTTCTCCGCCACCAGATCAAATCAGGACAAGACAAAACAAACTCACACACATGTGCAGATCTTTTCCCCTCATCAATGACCAACCAACCAAACCAAATTTTTTAAATTCCTGAACACCTCTTTACTCTTTTCCCCAAACATTCCTTTTTTACTCCTGTGTGTTGTTGTCTCTTCCAGGAAGTTTTCCTGGATTGCAGCAGTCCTGAGTGATCTTATTCTTCTATTTTCATTATTCAAAAAGACAGTAGTAAATTTTTTTAAACTTTTAATTTTGATGGAGTATAGCTGATTAACAATGTGATAGTTTCAGGTGAATAGCAAAGGGACTCAGCCATACATATACATGTATCCCTTCTCCCCCAAACTCCCGTCCCATCCAGGCTGCCTCATAACATTGAGCACAATTTGCTATGCTATACAGTAGGGCCCTGTTGGTTATCC EMBV3_11478 AAATGCCGCGCTCAGGTCTGAAGCAGGTTTGGGTTCTGCCAACAGCAATAGCCCAGCTCT Gene GeneID:783217|MLXIP:XM_002694572:624_cdna Constitutive 0 NULL GeneID:783217 17 GENE MLXIP NULL MLX interacting protein EMBV3_31841 AGAGGAATGAATGGACAGAGGAAGTGTGATTAGATGATTAGATCCCAGCTGACCACCTGC Gene GeneID:532674|GPR116:XM_002697270:26_cdna UTR3_Alt 2 NULL GeneID:532674 23 GENE GPR116 NULL G protein-coupled receptor 116 EMBV3_37767 GGCCAGAGGCCAAGTGCACACAGTTGATCCCACTTTGGAATAAATGCCCAGAAAGTATAT Gene BVV0102_151566 - 0 NULL GK000003.2:106411483-106426044 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174541 TCONS_00174546 TCONS_00174540 TCONS_00174543 TCONS_00174542 TCONS_00174545 TCONS_00174544 1 XLOC_104638 Coding TCONS_00174545 XLOC_104638 Coding Coding ZMPSTE24 3:106417967-106469213 j TSS129523 9624 2 TCONS_00174545_1 199 0.69139650872818 9 0.812371938725729 8.84244336890844e-05 2.90245758254588e-05 6.85363149305883e-05 0.000126088549498775 0.000169970296296901 1.67364212491087e-07 7.25329394436289e-11 5.06709992969259e-05 0.000338192418713517 5.92045633938264e-13 2.26803964039641e-16 0.000317519554958437 6.56871321227456e-13 0.000101773693605882 5.22654533757185e-05 0.000576135223338456 1.96752918619725e-15 0.000356407568791809 2.67390735727831e-08 2.56288974156418e-05 6.49186074205576e-21 0.000232758528830986 0.00011898277337819 9.52335703190209e-11 4.88605918581914e-05 4.47021412688262e-05 1.10317498587388e-11 0.00018649119820956 0.000253354967208377 0.000312385298953233 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2376 89.15 0.185785536159601 NM_005857.4 ZMPSTE24 Homo sapiens zinc metallopeptidase STE24 (ZMPSTE24), mRNA. 0.0 1977 81.70 0.20521612635079 TCONS_00174545_1 sp|O75844|FACE1_HUMAN FACE1_HUMAN CAAX prenyl protease 1 homolog; 3e-136 394 98.48 0.989949748743719 1 noncoding 1 1 1 1 -0.141792999430683 0.396866039485259 0.0341466692874698 0.506710792076383 GAAATCAGCGTCAGGATCTTCCTCAGGCCGGAAGTGAGAAAGAGACGGGTATATAAAACTACAACTCATGTACCGCTGGAGTTAGGACAGATCATGGATTCAGAAACATTTGAGAAATCTCGACTGTATCAGCTGGATAAAAGTACTTTCAGCTTCTGGTCAGGACTCTATTCAGAGGTTGAAGGCACTCTTATTCTTCTCTTTGGAGGAATTCCGTACCTTTGGAGAGTCTCTGGGCGCTTCTGTGGTTATGCTGGCTTTGGACCAGAATATGAGATCACTCAGTCCTTGGTGTTTCTGCTGTTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCTTGGAGTCTTTATAATACTTTTGTGATAGAAGAAAAGCATGGTTTCAATCAACAGACTTTGGGGTTCTTCATGAAAGATGCGATCAAGAAATTTGTTGTGACTCAGTGCATTTTATTACCTGTATCTTCACTTCTACTTTACATTATTAAAATTGGGGGAGACTATTTTTTTATTTATGCCTGGCTGTTCACGCTAGTTGTGTCTCTGGTGCTTGTCACCATCTATGCTGATTACATTGCCCCTTTATTTGACAAATTCACCCCTCTTCCCGAGGGAAAGCTGAAACAAGAAATCGAAGTCATGGCGAAGAGTATTGACTTCCCTTTGACTAAGGTGTATGTTGTTGAAGAATAAGAAACAAGGATGTAAAAACGAGGAGGTGCTTGCTGTACTAGGCCATGAGCTGGGGCACTGGAAATTGGGACACACAGTCAAAAATATCATTATTAGCCAGATGAATTCTTTCCTGTGTTTTTTCTTGTTTGCTGTATTAATTGGTCGAAAGGAGCTTTTTGTTGCATTTGGTTTTAATGACAGCCAGCCCACTCTGATTGGACTATTGATCATCTTCCAGTTTATTTTTTCACCTTATAATGAGGTTCTTTCTTTTTGCCTAACAGTCCTCAGCCGCAGATTTGAGTTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCCAAAGACTTATATTCTGCTTTAATCAAACTAAACAAAGACAACTTGGGATTCCCTGTTTCTGACTGGTTGTTTTCCATGTGGCATTATTCTCATCCTCCACTACTAGAGAGACTTCAAGCTCTGAAAAATTCAAAACAAGACTGAGTTGCCCAGGGTCTGCAACTGAAGACATTTCTGATTATTTTCTGTCCTGGCAGCATGTTCTGGCTCTTGATGTTTTTAACTTTTTTTTTTTTTTTTTAAGGAAAAATGATTAAGTACAGAAAAGCCAAGCTTTAAATACATTTAATATCTCATTTCAAAAATGATTTTAATAATCCATTTCTTAAAGAAAACACTGGATGAAATTTTGAGGCTTAATGTTTTTAAAGGCATAGTTTTATCTTTAAAATCTAGTTTACCATCAACTTGTAAAATTATTTGAGAAAATACAGAACTTGTTTTATTTACATGTTTATATGGAACCTGCATATAAGGTATTTGGGGGCATATGTTTAAAAGGGAACACCACCTCTGAATTCTCTCTCTAAGGCAGAAACAGTGGTCCCGAATCACTGTGCTCATACCTAAGTTGAAACTTATTTCTACTTTTATGCTGATATGATTTAAGCTGGCCAATCAGTGTTTTAAATAAGGAAGAAAGATAATTCGTAAGGCTGATGTTATACAACTGAAAGTAGTTAGAAATATGCTCTCTACTATTCTACCAAATTTCTGTTCCCTCTCTCGTTATACACTGATCAGGAATTTCTGATATTTTAAAATTAGAAATTATGTACAGAGTATTTTAAATCATTGGGTTTTCTTTTTGTTTTTTAGAAAATTTCAGTCTTTATCTTTCTTTCCACCTGGTGGGTATGATCCCATTAGGGATAATATAGTATTATCCCAAACATTCAGCTTTTTTCATTCATACTCTTAAGTATTCAATAAATTGTGCATCCTTTTACTTAGCAGAAATTGCCATATCAAACAGGTTTTGCTGTTAAAAGTGGGAGAATTGTGGAAAGAAGAAATGCCATTTTAAGAGACATAAGGGTGAAATACTGATGATTCTCTTATGATGTTACAGGAAAAAATATAATTTTCTATCTCTTTGGACAGAAAAGTTTCTGTTTTTATTTTTCTAATTTTTACCAGTAAGTCATGAGTACTATTTTATTTAATCAAGCCTAATTCCATTTTAGAAAATTATAGTTCTTGATATGCAGGCAATTTTTATTTTCAAGACAAACATTATGAAAGATTTCCAGTTTCTGAAGCTGCATGTTTGACTCAAATCTCTGTTCACTTTCTGAATGAGACCCAACTTTGTGCCCAGAGTCCCACCCACTGGTGATGTATATACTTTCTGGGCATTTATTCCAAAGTGGGATCAACTGTGTGCACTTGGCCTCTGGCCAGAAAGTCTTTTGCTTAGCTGATATTTGGATGATGTCTCTACATGGAAACAATAAAAATAAGCCTCTAGTTTAGTATCGCATTATTTATTTTCCTAAGGAACAGTCCTATGATTTTATCCAGCATCTTTTACATATGAATTCATGCTGTGATAACTGCCTTTCCTTCCTTTCTTGCCTTTAAATACAAATTTCAGTTCTACACCAGTGAAACATTAAAAATTGCCAATGCAGATTGATGTACTCTGTCTTTGATTTGACAAAATCTGTCTGTCATTTGTTACCTAGGATGTATGCTTATTACCCTAGAGGAGCTGAGTGCTAGTAGTGAAGAGTAGAAGGAACAGCCATAGTGCTGCGCGGTGGCAGGACCATTGCTGTACCTCACTCAGAGCCCTCTTAACTGCCTTCCTCCTGCTCCACTCCAGAGCGTTACCAGTTCTTGCTGAAGTCTCCTCGGAAGCGTCATTCAGAACCATCCTTCTCCATTCCCGTAACTTCTCATTGTCTCGGTCTGTTTGGTCTACTCCAGCTGCCTCTTCAGTCTTCCTTTTGTCACACGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGCGACGGACATTAAAGCCCTCGGCGCGTCACAGCTCTTAGGTCTTGGACAAACTGTGCTACAGCTCTTAAAATCAGCATTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAATCCAAGACTTGAAGAGAAGAGAGTGGAGGAGTGTGTGGGGAGGGAGGGAGGGAGAGAGAGAGAGAACGCATGCATGCGGGAGAGAGAGTCCGTGAGAAAATGCTTTGGCTCCTCCTTTTGTATGTTTTTTTTCTCCACCTGGGCCTGCCCTATGCAAATTTGGCTTAGCCAGGAGTGCTGTTTGTTCTGCCTGAAGTTTTCACTCTGGTCCTCGGACCTTCCTTGTCTTAGCCACCGCCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACATTCCCCCCTCAAGAGATGGGACGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGGTGGCGAGGGGTATTGGGCTTCCCCCTCTTGCTAGTCTCAAGCCTCGGAGTCCTTATAGCAGTGTCCAAGGGTGTGTGATATTTTCCGTGGTCAGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTGGTTGACAGGTGTATTGAGTGTCCTCTTCTGTTTTCTTCCACAGCTTGACTCGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCTGTGGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTACATATGGGCTGGAGTTGAGCCTTTGGGGACCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCTTGGAGCATATAGTGGTGACTCTTTAGAATCTTTTGGGTCCTGGTTCATACCCCACAAGTGTATATCCTGTTGGAATTGCCCAGTGGCTATGGTATAAGACTGGAGGGTCTGAACCTCTGGATCTAGGAAGAGGTCATTGACGTAAACAAAAGGTCTCCCATATAGCATCTCATGAGGACTAAGACCAACCTGTTCCTTAGGGGCAATGCAGGTGTGGAGGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTCTTTTATCGCTGATTTTAAGAATTGATTGGCTCTTTCTACTTTTCCTGAAGATTGAGGCCTCCAGGCACAATGGAGATAATAAGTAATGCCCAATTCTTTCGAGACTCCTTGGGAGACCTTAGAAGTAAATGATGTCCCATTGTCACTTTGTAATGACCTGGGCAGACCAAATCTTGGAATGATTTCATGGAGCAGTTTTTTAACTACCTCCTCAGCCTTCTTGGTCCGGGTGGGAATGCCTTCAATCCATCCTGTGAATGTATCTATAATAAGTAATAGGTATTTATAACCTTGAGAAACTGGCATCTGGGTGAAGTCCATCTGCCAGTCCTCTCCTGGGTAGGCCCCACGTCATTGGACGGGCTGGGCCAGCTGGGGTCTTCGAGCTCCTTGGAGGTTGTTTAATTGGCAAGTGGGACAAGAGGAGACCACCTGTCTTATTATAGTTGTTTGGAGGCCTGTTCCTCTGAAGGACCTTTCTAGTAATATTTGGAGGGCCTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTCCAGGCAGAAAAAGGAGTCCCTCCTTTTGGAACCACCCCATATGATCTTCTGGAAAGCCCTCACTCTTAGCTTTAAGAGTCTCACCTTCAGTATATGAAGGAGTTTCTGGCAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGCTGCTTGGTTCCCTTGTGCCACTTCTGTGCTCTCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTAGGCAGATGGACTGCTTCCAAGAGTCGAAGAATCTGATCACCATATTTGATTGGGGACCCTCGGGTGGTCAAGTGGCCCCTTTCTTTCCAAATAGCCGCATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTCATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCATACCCGGCTCTTCTTTTTCCATCCAAGACAAAGCTGCTTCCATCAGTGTGCCAGATTTCCTCAGGATTGGTCAGAAGATCTGACAATCCCTCTCGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAAGAGTGAAACGGGAGAGAGCCCTTGGGGGTAGGTAGGAGGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAATGAGGCCTGGATTTTCCATCAGCATTACTTGATATCTGAGGATTCTTTGATCAGACATCCATAAATGGCCTCTCCCATTTATGAGTTGTTTTACTTGGTGGCTGGTAAAAATAGTTTGCCCCCAAAGGAGATTTTTAAAGCATCTTCTATCATGATTGTAATAGCTACAAGATTTCGAAGGCAGGGGGGCCAACCTTGGGTAGTTGGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATCCCAACCTTTGAGTTAACACTTCCAAGGCTATTCCCTCTCTTTCATGGACATAAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGCAGCTGCCTGTTTTTTTGTAGCCTCTGCCTCCTTTTGAGGAGTTCCCCACATCAGTGGGATTGAATCATCTCATCCCTTTAAGCTTTCATATAAGGGCTGGGCAATTAGACCATAGTTGGATATCCAGATTCTACAATAACCAGTTAGCCCCAGGAAAGCTCACAATTGTTTTCCAGTCGTGGGAGAGGGCAACTGGAGGATTCCTTGTACCCGATCAGAGGACAGCCTCCTGGACCCATGTGTAATCTGAACTCCCAGATAAGTGACCTTTGTCTCGACCATCTGTGCCTTAGCATGGGAGACTTTATATCCCCTTTCTGCCAAGAAGTTTAGAACCTGAATTGCATGTTGTTGGGCACTTTTCTCATCTGGAGAGCAGATTAGTAGGTCATCTACGTATTGTAATATTTTCCCATTAGGTCCCAGGTCTAGATCTAGGAGATCCTGGCTAAGGGCCTGTTCAAACAGGTGGGGGCTATCTCTGAACCCCTGAGGTAATACTGTCCAAGTCATCTGTTGGTGTTTTTCTCCTGGAGCTTCCCACTCAAAGGCAAAAAGGTATTGGGATTCTTTAGCCAGTGGTATGCAAAAAAATGCATCTTTTGAGATCCAAGACTAAACCACTTGGCACTGGGTGGGATTTCTCCCAAGATTACATAGGGATTGGGTACTGTGGGATGGAGGGGGACTACAGCTTCATTTATGATCTGGAGACCTTGAACCATTCACCAGGTTCCGTCTTTTTTCTTTACTGAGAGGATTGGGGTGTTACATGGCGAACTGGTGGGGACCAATAGCCCACAAGCAAGAAATTTATTTATTAAAGGCTGTAGTCCCTCCCGAGCCTCTCTTTTGAGAGGATATTGTTTCCAGTTAGGAAACCGAGTAGGATCTGGGAGGACAGTGATGACCGGTTCAGCTTGGTGGGCTCGTCCAGGAATCCCCTGGTCCCACACCTGGGGGTTAATTTTGTCTTCCCATAGTTTTTGGTCCCTCTCTATTGAAGGTATAATGGGTTCTTCAGTAGTAACCAGGAGCTGTAGAGCTCTAGGGGCTGAAAAACTTCCCATCACAAGGGTGGTCCCCAGTTTAGTGAGTATATCTCTTCCCAATAAGGGGGTAGGACACTCAGGGACCACCAGAAACTGGTGGGAAAATATTTGTCCATCCCAGCAACAATGAAGTGCTCAGGTGAATCTTTTAGTAGTTGCTTTTCCTGTAGCACCCAAAATGGTACAGGTTTGGGAAGAGAAGGCTCCGGAGTAGGAGATCAAGAAGAGTAGGTAGCCCCTGTGTCAACCAAGAAATTCTCGGACCTACCTGCCACATCCAGTTGCACCCTTGGCTCCAGCCCCGTGATGGTTATCTGTGACAGGCGGCTGGCTGGAGTGGGCTGCTTCAGTCCTCTTGAACCATCGTGAGGGTAGGCTTGGCGCTTGACCTTGAGGCTCTTGGCACTTGACCTTGAGGGTCCCGAGGGCAGAGTGCCGCCCAATGTCCCAGTTGATGGCATTTGTGGCAAGCCGTTCTAGGAGACTTGTCACAGTTTGGACACTCTTTGGCCCAATGCCCTGCCTGTCTACAGATCAGGCATCTGTCTTGTGCCTTGTCCTTCAAGGACTCGGGGTTTGCCATAGGGCTTCTCTGGAGGGCGGCCAGCATCTGGGCATGCCTTGTCTCTTTCTTTCTCTCCTTCTCCTGGGCCTTGGCCTCCTTCTCCTGTTGTCTGTTATAAAAGGTATTGGTGGCTGTCTGGACCATCTCATCTAAAGAGGCAGCAGGGTCCTGCTGTTGTAACTGCTGTAACTTAATTCTGATATCTGATGCACATTGGGACAGGAATTTGTCCTTTAAAATCACCCATCCCTCGTAAGAGTCTAAGTCCAGGTTGGTAAACTTCTGGAGTGCCTCTTTTAGCCTTTCCAGAAAGGCAATGGGGTTCTCATTGGGCTCCTGAGTTATTGCTGAGACTGGGCACAGTCCCACAAGTAATAGACTTCTTTATGTTTCCATGGGTGGACTTCCTTAGGAGCTTTCTTTCACCTCCTTAGGGGTGAGTCTTTCTGAAGCTTATCCTACATAGAACTGTTGAAACCTGAGAGCCAGGCGTCCCCGGGTCAGGGTGCAGATCTCCAGGCAGGCTGAGGCGTGACAGCCTCCTGGGACCCCTGGGACTAGAGGATCCCCGAATAGATTGAGGCGTGACAACCTTTCGAAGACCGATCCCTAGGCAGGTCAAGGCGTGATGACCTCCTGGGACCACCCCCCGGACTGGAGTTTGGGCATCCCCAAGATCTCCAGTGTGACCAGTATTGGGTAGGATTAGGGGGTTGGATATTACAGAGTATTTCCCTCCCAAGGCCAGCTATTTTCTGGTTGTCTCTCCAGAAGATTGTAGAGGCAACCTTGTGGGTCTGGATGGGGCTCAGAAAAAGAGCATGAAACAGAAGGGAAGGGGGCAGAGCACAAACTTTGAAAGAATGACATAGCACAAGGGTATAATGTAAGCCAATTAAAATCAATTGGGTCCAAGATGACAAGTCAAATTCAAGTAAACCTTAATCCCCAATCTATAAACCAAGAGACACACCCAGAGGTGGCAGGACAGCTCCAAGGCACAAGGTCATAAGAGGGAGGAGTGGGTGGTTCCCCAAAGGCTGGGATGATCCTCTCATTAGCATATGAATTCCATCCCCTCACAAAACCTAGCCAGGCCTAATACCATGGCCTCAGCCCTTGCCTTCGGCAATGGTTCACACCCTAAAGGGTGGATTCTTTCTGGATCCTAACAAATCTACCTCTTATGCTTTGTCTTTCAGTGAATTTTTGCAATGAGACATCAGAGTCTGAGTTTGATTAGTTTTGGCCGGGCTTGAGTCCCGGGAGAGAGCTGAAGGACAGGAGGAAAAAGCAGTGGGAAAAACATGCCAAGGAATCCCCTTCATAGCCTGCCGGAAAATTTGCTAAATATCTGACCGGTGCTCACAGTTTCATTGGTCTGATCTTTGGCACAGAGAAGGACAGAAGAACCCCCACCGGCTTGTGTAACAGCTACTGGGGCTCAGCAGATAGCGCCTTTGGGACATGCTGAGGAGTAGCCTCTCCAGAGTCCCTCAATTGTGCCCCTGTGGCCCGCCTGTTCGAGGGAGGTTCGAGGAAACAAGAAACGAGAGACTGTGAAGGTCCCTCCAGCCATAGGAGCGAGGACCTCTTACCTTAACTGGAAGTCTTCTGGAATCTGAGACTGGGCCACGTGAGCTTTCTGCTGAGTTCGGTTTTCGTTGTCCCGGTTTCCAGCACGATGGGCCTTCCCCTGCGCTGGGTTTCTTCACCTTCCGCTTCTAGTGCGGGAGCGTCGCTGAGTTGGGCTCCTGCTGTGCTTGGCCTCTTCCACGTAGAGGTTGTTTCAGCCAGGTTATATCCGAGTCATGGCACCATAGATGTCACGCGAGTGTATGTTCCTTGGTTCTTTGTCTCGTCACAGCAAAGATTTGGAGCAACGGACATTAAAGCCCTCGGCGCGTCACAGCTCTTAGGTCTTGGACAAACCGTGCTACAGCTCTTAAGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAATCCAAGACTTGAAGAGAAGAGAGTGGAGGAGTGCGTGGGGAGGGAGGGAGAGAGAGTGAGAGAGATAGAGTGCATGCACGCGGGAGAGAGAGTCCGTGAGAAAACACTTTGGCTCCTCCTTTTGTATGTTTTTTTCCAACCCCCAGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAGTGCTGTTTGTTCTGCCTGAAGTTTTCACTCTGGTCCTCAGACATTCCTTTGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTT EMBV3_37665 CTTTCTCAACTCACTATTTGTCAGAAGGTCCATGTAAATGCCATAGACTTCTGACCTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01257 TAAGGGCACAGAACCGTCAGCCTCCAGGAAATCCTCCTCACACAGAAGAGAGGAATCAGA Gene GeneID:537885|UBE2R2:XM_002689798:85_cdna Constitutive 2 NULL GeneID:537885 8 GENE UBE2R2 NULL ubiquitin-conjugating enzyme E2R 2 EMBV3_01986 CTGCCCTGAAGTGCTTTTCCAGCCAGACCTCATAGAGCGGAACAATCTGGGCATTCACAT Gene GeneID:528168|LOC528168:XM_002699427:103_cdna Constitutive 0 NULL GeneID:528168 29 GENE LOC528168 NULL similar to Actin, alpha 1, skeletal muscle EMBV3_06869 GAGGAAATACTTGGAGAAAGACACCCACAGAACTGTACGCACAAGCAGAAGAGACCTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29161 GAGGAGAGGCGCTATAAAGGAAGTAAGACAGGTGGAGGTGGAAATGCATGACTTTTTCAA Gene BVV0102_293518 + 0 NULL GK000019.2:39564823-39603002 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100086 1 XLOC_060329 NonCoding TCONS_00100086 XLOC_060329 NonCoding NonCoding - 19:39570223-39571545 - TSS74462 1322 1 TCONS_00100086_2 68 0.027231467473525 1 0 0 0 0 0 1.86730908499528e-06 0 0 0 0 3.11232756822163e-06 3.46321571828154e-05 0 0 0 0 1.9978524503207e-05 0 0 4.33943629180311e-05 0 0 0 0 0 0 0 0 0 0 0.000241035714251121 XM_005220584.1 NPEPPS PREDICTED: Bos taurus aminopeptidase puromycin sensitive (NPEPPS), 3e-41 174 98.99 0.0741301059001513 XM_005257839.1 NPEPPS PREDICTED: Homo sapiens aminopeptidase puromycin sensitive (NPEPPS), transcript variant X1, mRNA. 8e-29 132 86.32 0.0877458396369138 0 noncoding 0 0 0 0 0.104569547268052 0.381823165797229 0.0466499978149813 0.34697774320689 GGGAGTAGTCAGCACCCCTAATCTATGCTGTTCAAGGGTCAACTATATAGGGCAAATGTAAGTCATTGAAGATGTTTCACAGCAAAGAGAATATGAAGGACCTGGGTTATGGATCCAAAATATTCCCCACATTACATGAAAGTAAATCATTATTGTAACCATTTAGTTTCACTGACTTAGAAATTATAGGCTTCAATGTCAGTTTTGAACTTGTAACTCTAGTTCCACTAAGGAGAGTCTTACCTGCGGAAGATGGTGAAGGGGTTCCAAAAACCAGGGAAACAAAAAGTTGGAGAGCAATCCATAGGTAGCTGATGCCATGAGATCCCAGCCTTCACTCTTTTCTGTAACTTAAAATGGCTGTTGGAATGACCGTTGGGGAGTAGATAGAATGTTGCCTACCTATCCTGTGTTCTTCATTAAAGAGAAGTAGATTAATTCCATATGCTTTATTTAAAATGTGGATAATAACGATACGTAACAGGTGATATATGTATGTGTGTCTGTATGTATTCATTCCTTTATTTATTTGAGGATGGCAATATGACATTATATACATCCAAATATGGCCAAAGAAAGGCCCTCAGAGTTGGAAAGAGTTTTATTTCTCTTGGTATCTTTCCATCAGGAAGTTGAAAAAGTCATGCATTTCCACCTCCACCTGTCTTACTTCCTTTATAGCGCCTCTCCTCTTTTTTTTTTTTCCTTTCCGAGTACTTCTGCGTCCTTTTTCACTAACACCAGTCCAGGATTATTTACCAATCCCAAGTGACTGGGCAACTCTATGACTAAACGCACACCCTTTGTTGATGATCTTCAAGTTGAGATGAGCCTGTTTGGCCCTGTCCTCTCATGAAGGGTCAGTCACCAGGCTCTTGCAGAACATGAGTTAGAAAATAAGGCCAACGCCCTCTGCTGCAGGGAAGAATGCATATATCTGTGTCTGATACGTGGGCCCCTGGAATGCTGCTACATTTCCCTTGAAATCATATGTCTTTAAAGGTTACAGTGTTCTTCTGGAGCTGGCATGTTAGAATTAACTTAGCAATGGTGTTGCCTTGACTTCAAATCCCAAAGAAATAAGTGAGGGCTCAGATTGAACTAGACCAGTGAAGTAGCCAAGAGCATTGTCTTAGCAACTTAGCAACAGTCACATAGCCTCAGTTTCTCCACCCTTGGCTCTATTTCTTTTTGTTTTTTAAATCCCTGACAAGAATAATTTACATCAGAATTAGTCCTCCCTTAAGTCTTGACCCCTTACCTCAAAGAGAATAATCTCACCCATGTCTAACCCTAGGTTAAGGGTGGGGTGAAGAAAAGAC TCONS_00096788 . 5' 5341 TCONS_00096788 . 5' 5341 EMBV3_01086 TGGGTCTGAATCCTAGAGACAGAAATATGACTGAACCCAAAAGGGCCAGGTCCCAGTGCT Gene GeneID:616754|C3H1orf183:NM_001101261:200_cdna Constitutive 0 NULL GeneID:616754 3 GENE C3H1orf183 C1orf183 chromosome 1 open reading frame 183 ortholog EMBV3_18434 TTTTAACTCCGTTCCTTTGACTGACACAGGCCACGAGAGGCAGCACAAGGAAGCCTCCGA Gene GeneID:281094|CSF1:NM_174026:11_cdna Constitutive 0 NULL GeneID:281094 3 GENE CSF1 NULL colony stimulating factor 1 (macrophage) EMBV3_24926 CTGCTTTGCAGACTTGAAACGAAGCACCACCGCCCGAGAGTCTGTTCACGTCCTATGAAT Gene BVT0102_050576 + 0 NULL GK000030.2:138902893-138986499 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04289 TTTGTCTTTCCTCGTCTGACTTACTATGGTGCGGGGAGGGATAAATTAGGAGTTTGGGGT Gene BVT0102_057564 + 1 EMBV3_34597 GK000009.2:97395407-97434235 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26162 CAGGATAGTATGATGGTAGGTACTCGACCATGTCGAAGTTGGCTATGTTTCGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_39638 GGTTTCCAATGGACTCAAAATTGATATTTGTGCCATGGAAAGCCATTCCCTCCTCAATCC Variant GeneID:534898|ANKRD46:NM_001034619:36_cdna 526^684 3 EMBV3_17177 GeneID:534898 14 GENE ANKRD46 MGC129030 ankyrin repeat domain 46 EMBV3_27896 TTTAGGTGCTGGGGCTAAGTAGTTGTGGTGCACGGGCTTAGTTGCTCCGAGGCATATGAA Gene BVV0102_108447 + 0 NULL GK000008.2:69005582-69500576 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232466 1 XLOC_141951 NonCoding TCONS_00232466 XLOC_141951 NonCoding NonCoding - 8:69442078-69443439 - TSS173970 1361 2 TCONS_00232466_5 125 0.597354886113152 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00091489501331878 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_003586218.2 FRAS1 PREDICTED: Bos taurus Fraser syndrome 1 (FRAS1), partial mRNA. 4e-39 167 78.00 0.136664217487142 0 noncoding 0 0 0 0 -0.970453024137176 0.0508107338868776 -0.0126751369302988 0.863802565963541 CTTTAGGTGCTGGGGCTAAGTAGTTGTGGTGCACGGGCTTAGTTGCTCCGAGGCATATGAAATTTTCCCGGACCAGGTATGGACCCATGTCCTCTGCATTGATAGGCAGATTCTTAACCACTGGACCACCAGGGAAGTCTACCTGTGGGATTTTAACTTCTTGAGAAGACTGAGTGATGATGCAGAGAGCCTAATACCGTGGAAAGATTTCACTGTTACTCACAGTTTCCCCAGAAATGAGAGGCATGGCAAGCATGCAGGACCACTCAGGGAAGCACCAGGGTTGTTCAGGAGGGGAAAGCCTAGGACACAGTCCCAACTGTGTATTTCATGGAGGAGGCCAGGAGTGACTGCTGATGACTGGCTAGCTTGTATAATGTCAGCATGTGCTGAGCTATAGTGTGGTCTCTTGTTGTCTGGTACCTGGCCCTGGGCTGAGGACAGGGGAATATTGGCTCAGTGGGTGAAAGCTAGATAAAAGAGGTGTTTGTGGTATGAACTTGGGCTTGGTTGGTTTGTACATGAAAGTGCATTCAGAGGCACGTTGTTCTATTATCTCTAGGAATCAGCCAGCCCTGGGAGGGGCGGTCTCCCCGCAGCCAGGGGGCGCCCAAGATGTCAAAGCATCAAGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGCAACCCCATAGACTATTGAAGGCCAAGCTGCTCTGTCCATGGAATTTTCTAGGCAAGAATGCCATTTCTTCCTCCAGGGAATCTTCCCCACCCAGGAATCAAACCCAGGTCTCCTGCATTGCAAGCAGATTCTTTATTGTCTGAGTCACCAGGGAAGATGTTATTACCATTTTACCTTGATTTCACCCAGATTTGTGTGGAAGAGGCAAAGGGGACACGCAGAGCAAGATATGGGGAGATGTATGCAATGGGTTCTGCCTTCCCCGTGGACCTTTCAAAAGCCAGAAGTCCCCAGTAACAGGTCACCCCCACCCCATCCACTCCGAGACACCATGTGTATTGGAGGACACACACAGTCTGAGTGGTGGGGCCAGAGCCTATCACCATCTCCCCTACAGAAGCCCCATGACATCTAGGAGACACAGTGGTGAGCCAGCTCCTGGGTCTACCTCACTCCATCTGGCGCCACCCGCTCAGCCGCCCGGCTGTGCAGGGTGGGAACAGCCACACACATGCCAGGAGACAGCCAACCCACCTTCCCTAAGAGCTGCAGCCACTCACACACTCTGTGGCTCCAGGGGTCCCAGAGGCCCTGCTGCCTGTGTGCCTTCGTCTCCCCACTCCCAGGCACCTAATGCACACAATCCTCCCTTAACTCTTTCCTTCAGCCTCTGGTTTTGTTCAAAC TCONS_00228035 . 3' 57138 TCONS_00228035 . 3' 58498 EMBV3_04691 CAATAGTCTTGATACCATAAGCTCTTTGAACCTTTCAACTGTACATTTTGTTACATTTCC Gene GeneID:281216|GUCY1A3:NM_175778:90_cdna Constitutive 0 NULL GeneID:281216 17 GENE GUCY1A3 GUCY1A1 guanylate cyclase 1, soluble, alpha 3 EMBV3_40882 TGTGATCACGTCCTACCATCTGCAGACCGTGCTCTTCTGGACTTGTGAGAAGTACCCCTA Gene GeneID:518597|LOC518597:XM_002707808:177_cdna Constitutive 0 NULL GeneID:518597 3 GENE LOC518597 NULL similar to Uncharacterized protein C1orf161 homolog EMBV3_05251 GTGTCAGTGGATGGAAAAGTTCAGAAAAGATCTATGCAGGTTCTGGAGCAGTATCTTCCC Gene GeneID:506714|MGC133692:NM_001038509:2_cdna Constitutive 2 NULL GeneID:506714 9 GENE MGC133692 NULL hypothetical LOC506714 EMBV3_27974 GTGGTAGGCAAAATTTCCAGATGTCTAAGAGTCCTGGCCCCGGCTATTCCAACACTAACC Gene BVT0102_248094 + 0 NULL GK000008.2:39719732-39930088 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11644 CCCAGCCCTGTGCTCTTGTACAGTGTCTGTGCCATGGATTTTGTTTTTCTTGGGGTACTC Gene GeneID:407125|EGR1:NM_001045875:4_cdna Constitutive 0 NULL GeneID:407125 7 GENE EGR1 MGC139820 early growth response 1 EMBV3_16004 GTAGCAGCCCCAAGTTCTCAGAGATCTCAGAATCGTGATCGTGCTGAAGAACCGCATCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31589 ATCATCCCTGTTTTGTCCTAGAGTGGACATGTGGTTTATGGCCAGTTGCTGGCTGGTGGT Gene GeneID:509960|MTF1:NM_001035080:113_cdna Constitutive 0 NULL GeneID:509960 3 GENE MTF1 MGC142744 metal-regulatory transcription factor 1 EMBV3_18019 TGATCAGCGACCAAGATCAAGACTTTCTCGGCTACATGATGGACTTGAAGGTGCAGGTGC Gene GeneID:785608|LOC785608:XM_002707903:4_cdna Constitutive 0 NULL GeneID:785608 8 GENE LOC785608 NULL similar to Testis-specific Y-encoded protein 1 (bTSPY) EMBV3_08111 CTGATCACTGGCTGTGTTATCAGTGGGTGTGGGTTGTGCCCTCTTAGGACCACATAGATT Gene GeneID:521015|HEPACAM:NM_001031759:23_cdna Constitutive 2 NULL GeneID:521015 29 GENE HEPACAM FLJ25530 hepatocyte cell adhesion molecule EMBV3_18910 AAACAAGCGTCACCTCAGCCAAGACCACAGACTCAGCAAAGACCTTGAAAACAGCCAGCG Gene GeneID:504643|MUC20:XM_002684818:244_cdna Constitutive 1 NULL GeneID:504643 1 GENE MUC20 NULL mucin 20, cell surface associated EMBV3_24804 CCTGTAAGCTGTGTTAGGAATAAAGGCATCTGTGTGCCGATCAGGTGTCCTGGAAGCATG Gene GeneID:286837|TAP:NM_174776:5_cdna Constitutive 0 NULL GeneID:286837 27 GENE TAP NULL tracheal antimicrobial peptide EMBV3_39453 AACCCGTCTTCCCCTAACCCTCGTGGGGTCACATTTTCAGAATCCAGGTTCTCAGTTGTC Gene GeneID:526424|LNX2:NM_001075884:55_cdna Constitutive 2 NULL GeneID:526424 12 GENE LNX2 MGC139931 ligand of numb-protein X 2 EMBV3_07066 GAATGGCCAGGGCTGGCTGGGGGAAGGGCACTGATCCTCCGGTCCTTCTCCAGTCTCTAA Gene BVV0102_219768 + 1 EMBV3_14602 GK000010.2:89128261-89244968 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31149 AAAGGGACCCTCAGACTGTAAAGGAGAGGGTTGCCTGAGAGCTTAGAGGACGTGGCTATG Variant GeneID:100138099|ZNF263:XM_002697944:629_cdna 857^930 1 EMBV3_06748 GeneID:100138099 25 GENE ZNF263 NULL zinc finger protein 263 EMBV3_38220 ACTTCGAACTTTAACCAGTCACCTAGAAGTAACAGCAGTCTTACAATGAGATCCGGACGG Gene GeneID:100140586|LOC100140586:XM_002686888:93_cdna Constitutive 0 NULL GeneID:100140586 4 GENE LOC100140586 NULL hypothetical protein LOC100140586 EMBV3_19350 CATACAAGTACCCGAGGAAGGTGGAGTTTGTCTCAGAGCTGCCCAAAACCATCACTGGCA Gene GeneID:282576|ACSM1:NM_174682:297_cdna Constitutive 0 NULL GeneID:282576 25 GENE ACSM1 BUCS1 MGC133979 acyl-CoA synthetase medium-chain family member 1 EMBV3_00468 TATGGCCCTTCCCAACCGGCCAGCCCGGCGGTTCTTGTTTCGGGCCCGGGGAGGTAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15021 GAGACTCAGGTACAAACCCCACTTCAGACCTCCCTTGCCTACTTACATCAGAAAAGCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23233 TGATCCCTCCTGGTGACAACCCCATTGTACAGGGATGAAGAAAGACCGATGCTGCTTTCA Gene GeneID:510554|PCDH17:XM_002691735:35_cdna Constitutive 0 NULL GeneID:510554 12 GENE PCDH17 NULL protocadherin 17 EMBV3_13705 GATGACTGAGTCGCAGGTCAAGGTGTGGTTCCAGAACCGGAGGACCAAGTGGCGGAAGAA Gene GeneID:784372|LOC784372:XM_002698724:169_cdna Constitutive 0 NULL GeneID:784372 27 GENE LOC784372 NULL similar to Homeobox protein Nkx-6.3 EMBV3_09332 GGTGCACATCTGGAGACAAGGACCAAAAACTGGGTCACCTGCTCCTTTGATCACTCATCA Gene GeneID:338039|CASP4:NM_176638:5_cdna UTR3_Alt 2 NULL GeneID:338039 15 GENE CASP4 CASP13 MGC137679 caspase 4, apoptosis-related cysteine peptidase EMBV3_29881 TCTATGTTAAGCCCTGAAGATGGTATTTAAGGGAGGGCCCCTGAGACAAAGGGCGTCAGA Gene BVV0101_035747 - 1 EMBV3_42213 GK000002.2:116647703-116691054 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111831 1 XLOC_067731 NonCoding TCONS_00111831 XLOC_067731 NonCoding NonCoding - 2:116667968-116668285 - TSS83452 317 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000916491494762543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.113824740192055 0.392163695374855 0.0148986234661551 0.761986106692376 CAGCCACTGCCACAGCCACCACTGCAGCCACCACAACTTCCACAACCACAGCAGCCCATGGTGAGGACTTGGACTCAGGAGAGGTGAGGAGGGAGACTCAGGAAGGGAGGGAGGTCTGACGCCCTTTGTCTCAGGGGCCCTCCCTTAAATACCATCTTCAGGGCTTAACATAGAGCAAGTGACCACTTCCTTTGTTATGGTTTCCACCAGGTTCCTCTGGAGAGTTTCACCAGACCTCGAGGCTATTTCCTTGTGAAACATCGCTGACCTCATCCAACTGCTTATTTTAGCATTGACCCCTTCCTCGGGTTATGCTT TCONS_00106324 . 5' 12841 TCONS_00106324 . 5' 12841 EMBV3_00215 CAGGAGCACCAAAGGACCCATTGACGTTTATTTATGTGAAGTGGAGCAGGGTTCCCACTC Gene GeneID:514085|E2F6:NM_001076848:123_cdna UTR3_Alt 2 NULL GeneID:514085 11 GENE E2F6 NULL E2F transcription factor 6 EMBV3_19918 TGAGAGGAGGATGCAGGAGAGATTGTCGTGTGGCTTGTTGGGGCTCCTTGAATGACATGT Gene GeneID:514291|EMILIN2:NM_001143869:101_cdna Constitutive 0 NULL GeneID:514291 24 GENE EMILIN2 NULL elastin microfibril interfacer 2 EMBV3_05721 CTCGGAACATCGGTGGACCCCAAAGAGGCTTCAGTGTTGCAGTTCAAGGTCCAGGAGATT Gene GeneID:506367|FAM124B:NM_001101870:64_cdna UTR3_Alt 2 NULL GeneID:506367 2 GENE FAM124B MGC160014 Protein FAM124B EMBV3_28301 TGCCTCACAGGTATGAAGAGGATCACCACAACTGCTACAGCTACGCCCTCGCGTTCATTA Gene GeneID:782327|LOC782327:XM_002697132:68_cdna Constitutive 0 NULL GeneID:782327 22 GENE LOC782327 NULL similar to mCG132465 EMBV3_11857 TGTTCGCCGGTGCGGTGAGAGCAGCCTCCGAATGGCCCTCTTGCTCCCGAACGTCCTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34965 ACCCTACTTCATCCAGCCAATAGGAGCCAAGTATCAGTACCCATCTCTGGACCAGCTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27681 CTAGCCTTCCAGCTTTGCTGTTCAAAGCAAGACCCCTTTTAGGAGCCGAACATCATCTGC Gene GeneID:617866|MLF1IP:XM_002698654:106_cdna Constitutive 0 NULL GeneID:617866 27 GENE MLF1IP NULL MLF1 interacting protein EMBV3_36109 TGGAAGAGCAAGTAATGTTAACTGAAAAAGAGGTGCCTCTGATCTATCCAGCGAAGAGGG Variant GeneID:508861|SAT1:NM_001034333:11_cdna 300^609 3 EMBV3_19111 GeneID:508861 X GENE SAT1 MGC127572 SAT spermidine/spermine N1-acetyltransferase 1 EMBV3_00619 GACCTGGTGGAGAAAAAGGAGGGTCCAAAGGGAGAGAGAGCAGTCAAGCCAGTAATCTCA Gene BVV0102_130202 + 0 NULL GK000015.2:19877438-20234391 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00010779 TCONS_00253025 TCONS_00200933 TCONS_00238445 TCONS_00062753 TCONS_00250197 TCONS_00055302 TCONS_00124927 TCONS_00199803 TCONS_00064414 TCONS_00152859 TCONS_00210177 TCONS_00231502 TCONS_00199063 TCONS_00186108 TCONS_00165813 TCONS_00136848 TCONS_00098302 TCONS_00248863 TCONS_00109859 TCONS_00249283 TCONS_00023615 TCONS_00252354 TCONS_00008225 TCONS_00009883 TCONS_00135547 TCONS_00010052 TCONS_00006222 TCONS_00223827 TCONS_00239219 TCONS_00161793 TCONS_00175545 TCONS_00040583 TCONS_00055867 TCONS_00137302 TCONS_00208127 TCONS_00117484 TCONS_00040195 TCONS_00065249 TCONS_00244654 TCONS_00157488 TCONS_00123618 TCONS_00238457 TCONS_00137807 TCONS_00249989 TCONS_00207068 TCONS_00190323 TCONS_00152628 TCONS_00066192 TCONS_00072815 TCONS_00177280 TCONS_00089138 TCONS_00206861 TCONS_00250580 TCONS_00064927 TCONS_00033746 TCONS_00253665 TCONS_00062743 TCONS_00156997 TCONS_00122096 TCONS_00187057 TCONS_00133066 TCONS_00125001 TCONS_00063180 TCONS_00245928 TCONS_00107574 TCONS_00153219 TCONS_00250099 TCONS_00208547 TCONS_00010466 TCONS_00252056 TCONS_00244651 TCONS_00223462 TCONS_00124845 TCONS_00088087 TCONS_00030942 TCONS_00124584 TCONS_00142124 TCONS_00135701 TCONS_00006827 TCONS_00157440 TCONS_00241788 TCONS_00122014 TCONS_00022065 TCONS_00250881 TCONS_00064461 TCONS_00020016 TCONS_00238326 TCONS_00201733 TCONS_00167497 TCONS_00038667 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00156732 TCONS_00179470 TCONS_00222115 TCONS_00244653 TCONS_00056147 TCONS_00054954 TCONS_00110327 TCONS_00070840 TCONS_00154085 TCONS_00063487 TCONS_00207359 TCONS_00070810 TCONS_00224114 TCONS_00175199 TCONS_00250938 TCONS_00047158 TCONS_00030941 TCONS_00050046 TCONS_00156870 TCONS_00116696 TCONS_00008097 TCONS_00124110 TCONS_00249570 TCONS_00240475 TCONS_00020010 118 XLOC_006139 XLOC_131641 XLOC_006330 XLOC_155966 XLOC_122583 XLOC_145112 XLOC_037480 XLOC_153140 XLOC_033110 XLOC_076470 XLOC_121455 XLOC_039138 XLOC_092624 XLOC_128687 XLOC_140991 XLOC_120716 XLOC_112161 XLOC_100653 XLOC_083059 XLOC_058548 XLOC_151806 XLOC_065763 XLOC_152226 XLOC_014282 XLOC_155295 XLOC_003783 XLOC_005436 XLOC_081770 XLOC_005604 XLOC_001785 XLOC_137126 XLOC_145885 XLOC_098678 XLOC_105326 XLOC_024399 XLOC_033675 XLOC_083512 XLOC_126640 XLOC_071650 XLOC_024012 XLOC_039971 XLOC_150512 XLOC_095943 XLOC_075170 XLOC_145124 XLOC_084017 XLOC_152932 XLOC_125587 XLOC_116358 XLOC_092393 XLOC_040909 XLOC_044583 XLOC_107054 XLOC_053924 XLOC_125381 XLOC_153523 XLOC_039651 XLOC_019979 XLOC_156604 XLOC_037470 XLOC_095457 XLOC_073652 XLOC_113105 XLOC_080989 XLOC_076544 XLOC_037907 XLOC_150855 XLOC_063484 XLOC_092984 XLOC_153042 XLOC_127060 XLOC_006017 XLOC_154997 XLOC_136762 XLOC_076388 XLOC_052874 XLOC_017192 XLOC_076128 XLOC_086549 XLOC_081924 XLOC_002389 XLOC_095895 XLOC_148452 XLOC_073570 XLOC_012736 XLOC_153824 XLOC_039185 XLOC_010694 XLOC_144993 XLOC_123378 XLOC_102333 XLOC_022490 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_095192 XLOC_109243 XLOC_135424 XLOC_033950 XLOC_032763 XLOC_066231 XLOC_042617 XLOC_093846 XLOC_038214 XLOC_125876 XLOC_042587 XLOC_137410 XLOC_104982 XLOC_153881 XLOC_027294 XLOC_030177 XLOC_095330 XLOC_070862 XLOC_003657 XLOC_075662 XLOC_152513 XLOC_147139 XLOC_010688 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_20310 TCTCTTTCCCTGAACCACCCCCCGGCTCCAGGTTCTACAGCCGATTTGCTACCATGTAAT Gene GeneID:506631|SLC25A17:NM_001045948:144_cdna Constitutive 1 NULL GeneID:506631 5 GENE SLC25A17 MGC126926 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 EMBV3_04841 TTACTGAGCCCATCAAAGCAAATGCTAATCTCATCCAGAAACACTCACAGACACACTCGG Gene BVV0102_160123 + 0 NULL GK000005.2:1393426-1433212 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196875 1 XLOC_118540 NonCoding TCONS_00196875 XLOC_118540 NonCoding NonCoding - 5:1413476-1414156 - TSS146443 680 1 TCONS_00196875_1 37 0.898529411764706 1 0 0.000410172643980282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.05454863483575e-05 2.11512618201086e-05 8.48218385988791e-05 0 0 0 0 0.000176136654411952 0 0 0 0 XR_228285.1 LOC101907759 PREDICTED: Bos taurus uncharacterized LOC101907759 (LOC101907759), 1e-16 91.5 75.37 0.192647058823529 NM_001001701.3 C4orf3 Homo sapiens chromosome 4 open reading frame 3 (C4orf3), transcript 1e-17 95.1 77.34 0.182352941176471 0 noncoding AACAAAGAAACTACGTTCATCAGCAGCCTCCAGAGAAACAGGACCGATGGGAGATTATCTAATTATCTGTGCTCATCTATTTATTATGAGGGATTGACTTGTGATTACGGAGGCTGACAAGATCTACAGTCTGCTATCTGGAAGCTGGAGACCCAGGAAAGCCAGTGATGTAATTCAGTTTGAATCTGAAGGCCTGAGAACCAAGAAAGCTGATTAAGTACCAGATTTGGGACAGAGGATGAGTTGAGAAGTTAAAGCAGTAAGACTGGAGAAAAGAGGAATTCCTTCCTCCACCATTTGATCTATCCAGGCCACTAATGGCTTGGATGCCCAACTGCAGTGAGGGAGGGCCATCTATTAGTAGTTTACTGAGTCCATCAAAGCAAATGCTAATCTCATCCAGAAACACTCACAGACACACTCGGAAATAGTGTTTTATCCAGGCAACTGACACAGAAAATTAACCGTCATGCTCTTTATCCCTTTAATTTGTGTTATTAAGATTCCTGAACTTCCCCGGTGGCACAGTAGATAGGAATCTGCCTGCCAATGCAGGGGCCACGCGTTGCTGCCAAGCAACAAAGCTTGCAAGCCACAACTTCTGAAGCCCATGCACTTCAAGCTTGTGCTCCACAATAAAATAAGCCACTGCAACGAGAAGCCCTGGCTTCACAATGACG TCONS_00190712 TCONS_00190713 TCONS_00190714 TCONS_00190716 TCONS_00190717 . 3' 15153 TCONS_00190712 TCONS_00190713 TCONS_00190714 TCONS_00190716 TCONS_00190717 . 3' 15832 EMBV3_28561 GATGTGAACTGATTTAAAAAGAGGAAATCTGCTAGTAAAAATAGAATAAAAGTAGCTGAA Gene BVV0101_040412 - 1 EMBV3_25631 GK000009.2:52922730-53228693 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41935 TCACGCCCTGTCGGAGAAAATGGAAACACTGAGTTGTTCTGCTGATAGTTTGGGGGATCC Gene GeneID:404193|FGFR2:XM_002698546:29_cdna Constitutive 1 NULL GeneID:404193 26 GENE FGFR2 FGFR fibroblast growth factor receptor 2 EMBV3_20856 ACACTGTCACCCCTTATGTTTGTAGCAAGCATTAGTAAGTATTTATAAACCTCTAGGGTG Gene GeneID:100337035|LOC100337035:XM_002694229:152_cdna Constitutive 2 NULL GeneID:100337035 16 GENE LOC100337035 NULL complement factor H-related 4-like EMBV3_19288 GCTATGGCCAGGATAACACCACCAACTATGGGTATGATTCCTACGAGGCCTGTGACTCGA Variant GeneID:539700|AKAP8L:XM_002688560:215_cdna 179^361 1 EMBV3_08191 GeneID:539700 7 GENE AKAP8L NULL A kinase (PRKA) anchor protein 8-like EMBV3_30676 TCTCTGGTTGGTCAACATTTTCTGGTTCTTCCGAGAGGCCTTCATTGTCCCGGCATACAC Gene GeneID:493993|PSENEN:NM_001008669:535_cdna Constitutive 0 NULL GeneID:493993 18 GENE PSENEN PEN2 presenilin enhancer 2 homolog (C. elegans) EMBV3_33209 GGGCAAAACTAGCACACACCCCTATGTTGGGTTCCCTGATGGCCCATTTTCTATGTCTCA Gene GeneID:519816|AASDHPPT:XM_002692918:32_cdna UTR3_Alt 2 NULL GeneID:519816 15 GENE AASDHPPT NULL aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase EMBV3_02811 TTTCTTCCCAGGCCTCCTCTCAGTCAACACACATATCAGAACAAGGAAGTCAAGGCTGGG Gene GeneID:517886|DCLRE1C:NM_001100377:103_cdna Constitutive 0 NULL GeneID:517886 13 GENE DCLRE1C NULL DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) EMBV3_02925 TACTGCCACAAGCCCTGCTACGGAATACTCTTCCTCCCGCCTGCCGCGCCAGCGCCCGCC Variant GeneID:780821|CRIP2:NM_001079649:342_cdna 73^520 1 EMBV3_09248 GeneID:780821 21 GENE CRIP2 MGC140056 cysteine-rich protein 2 EMBV3_24653 AAGGGTGAAGCGCCATGGTCCAGAGCAGGAAGTCTAAACCACTGTAGAACTGGGGCTATA Gene BVT0102_159881 + 0 NULL GK000010.2:76384025-76707921 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20888 ACTGCATGAGTGAACAGCAGGCAAGGCGACGGGAGGAACTGCAGAGGCGGAAAGAGCAAA Gene GeneID:100296470|LOC100296470:XM_002693456:38_cdna Constitutive 0 NULL GeneID:100296470 15 GENE LOC100296470 NULL hypothetical protein LOC100296470 EMBV3_21707 GCAGCATTGAAAATCAGCTAGTTATCATGGCATAGCACCAAAGATTGCCGAGTACCTCAC Gene BVT0101_015035 + 0 NULL GK000020.2:14717542-14723556 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113365 TCONS_00113368 TCONS_00113361 TCONS_00113363 TCONS_00113362 TCONS_00113364 TCONS_00113367 1 XLOC_069016 Coding TCONS_00113367 XLOC_069016 Coding Coding SREK1IP1 20:14682225-14719739 = TSS84815 2841 1 TCONS_00113367_1 155 5 0.924399541492283 0.00394786230220846 0.00505084668738451 0.00260472550441683 0.00171711683592845 0.00114592039834621 0.000622358417080528 0.00251813319733457 0.00178796840782389 0.00313444347974458 0.000141619217503111 2.230360682769e-218 0.000275788181282941 0.000591405685062983 0.000656125840476909 0.000806721964260309 8.94029544401076e-18 0.00315136398925158 5.92544829197921e-63 0.00473258764941188 0.00363735047815326 0.00236798736111875 0.000436596458587815 0.000621701999841871 1.33902194418025e-77 0.00535064812185894 0.00488188775062519 0.00205364641959981 4.719083230594e-19 2.79511735063189e-05 7.08602781070261e-05 NM_001206619.1 SREK1IP1 Bos taurus SREK1-interacting protein 1 (SREK1IP1), mRNA. 0.0 5124 100.00 0.99964801126364 NM_173829.3 SREK1IP1 Homo sapiens SREK1-interacting protein 1 (SREK1IP1), mRNA. 0.0 2021 79.73 0.82224568813798 TCONS_00113367_1 sp|Q4V9W2|SR1IP_MOUSE SR1IP_MOUSE Protein SREK1IP1; 1e-32 116 89.52 0.670967741935484 1 coding 0 0 0 0 -1.46782568959371 0.0361946163474972 -0.030007241296255 0.536990267191956 CCACTTGGTTCCGCAATCTCCAGGGGCTTTTAGGGCCTTCCGTTACTGTCAAACCCGGGTGCCGCGGCGCGGGTGGGAGAAAGACGGCCCCCTCGTTGGTGTTGTCCTCGCGGCCAGCGGGAAGCGAGCGAACACTTAGAAGCCTAGGGGTTCTGCGACCCCTCTTACCAACGCCATGGCAATTCCAGGTTGCAACAAGGACAGTGTCCGAGCAGGCTGTAAAAAATGTGGCTACCCTGGTCACCTGACTTTTGAATGCCGCAATTTTCTCCGAGTAGATCCCAAAAGGGATATAGTTTTGGATGTCAGCAGCACAAGCAGTGAAGAGAGTGATGAAGAGAATGAGGAACTGAATAAACTGCAGGCATTACAAGAAAAAAGAATTAATGAAGAAGAGGAAAAGAAAAAAGCAAAAAGCAAAGAGAAAATCAAGTTGAAAAAAAAAAGGAAGAGGTCTTATTCATCTAGTTCCACTGAAGAGGACACTTCAAAACAAAAGAAGCAAAAATACCAGAAGAAAGAAAAGAAAAAGGAGAAAAAGAGTAAGTCGAAAAAGGGGAAGCATCACAAAAAGGACAAAAAGAAGAGAAAAAAGGAAAAGCATTCCTCTGCCCCTAACAGTTCTGAAATATCCAAAAAGTAACTGAGACTGGCCTGAGCTATTAAATTTAAAAATTTACTTTTGAAAATTATTTGACATTCTTTGAAATTTTCCATATAATTATGCTTTGCAATAAATCACAGCCATTTCCATATAGACATTTTTTCATATATAGGACCATTATTGTCTGACAATATTTTAATGTGCTATAATTATAGAGTATTGAATCAGTCTTATTACTTGATAGCCATGCCCCAAGTATGGATATCTGTGCAACAAAACTCATCATTTTTGGTATTCCTTTCTGTGTTAATGTTATTACTTCATAAGCTGATTGTAAATTGCTTTACTACAGTCAACACAGGCAATCTACCTAGCAATAAATGAATATTGCTGGATTAAGTGTCCATCTTCCAGTGATAAAGTGAGGTAGGCTTGATGCTGAAAATTTTAAAAGCTTTATATCCTGTGATAATATATTACTATTAAGATAATGAAATTCTTCACTTAGTTTTTTTTTTTTTTTTTGGATGTCATAGGAGATGAAGCTGCTCTATTGGTCTTGACTAGAACTTTTTAAATGAATGGTGTCAGCAGGAATATGATAATGAAAATATTTATAACAAAATTTCACTGTTTTCTGAGATGCAGAGTTTTTAGTACCTGCCTCCTTCGTTTTTGTAACAAAATATTTCTTCCTTGTTTAAAAAGACAAGTCTAGTTCAACCTATTTGTAAGTCTGGTAGAGATGATGCTGTGTTGGGCAGGATTTTTAGGACAGACTCCTGGGTTGTTTTACAAATGTGCCATATTGGCATGTCTTAAAGAGATACCTCAAACACAGAGTTTTTTTATTTAGAAGGACAACAGCTAAATCTTCATTAGAACTGATTTTTATTGTATTCAGTATATAAATTTTATGAAGCTTGTTTCTATGAGTAATGTGGAAATTTTTTATAAATGTGAACATATATATTTATTTGTCTGAAATAATTTGTAGTTTTGAAGCAGGTTTCCATTGACTTTATGATTTCATAATATGACCAGTTTGGGGTGTTTCTCTTACTTCAGTCATAAATCTCAGGAGCAGTGACAAAAATTTAGGATTAAGAATTTTATTCTGTACTTTTTAAAATTTAAGAGCCAGGGAGTTACATCATGAAAGCCTTTATATAGTAATGAAAATTTTGTATGAGTCAGCATTGTCAGACACATAGTAGTAGGTATAAATGTTTCTATATTTTTTTTAATTTCACAATGATCAGTGCTACTTACTTGGCTAAATACTCCAATATCCCTTACGTCCTATAAGTTAAATACTTTTCATTGTAGCAGCATTGAAAATCAGCTAGTTATCATGGCATAGCACCAAAGATTGCCGAGTACCTCACTGTGGGTGCAGTTACAAATTCTTAGCCTACATACGTAGCTATAGGTGTATTCATAATGATGAAATCAGGTAACCTCCCAGCCTGGAAAGGTGTGCTGATCCTCCCTTCACCCAGCAGCCCTAGCCTGCATGACCTCAGTAAGACTGGGAGAGCTTCATAGCTCCTCTGAGCAGTGCTCACCAGGCGCAGACTCTAGGGAAGCCAAGTCCATATCCCTGTTCTAGCATTGCAGCCATGGATGCTGTCACACTTGTAGCTTTTCTATAACCCAGCTTAGTCCGGTGGCCTCCTTTAAAAGACCTCCACTTGTTTAAATGTGTTAGTCAGTTATTTGGAGAGAAACACAGAGCTGTTAGATTTTTAAGAGTTTCTTTTGCCTTTGCTGTAGTTTATTTTTAAAAACAGTACTTTATGAAAATACAGTCCTTTGGTTATCAGGATAAAAAAAGTAAAAAAAAAAATTCCAATTTTAAAAAGATGATTAGAAAGTGCTACATGCAAATAGATGGTCTCATTGTATTGAGTATGTAATGTGGTTAAAAGTGATTATTGTAGTGACACAGAGTTAATCCAGTTATTTGTAAGTTTTATTTTAGTTAATTGTAGAGACAATAAATTGGCTTGTCAGGTTTGTTTTTTGAATGGTGGTATACTCAGTGGCTCAGGAGAGTTGTATAAAATTCAGCCTTCATTAACTACTAGAGTTTGCAAATTAAAAGATTTTAATGTTGTGTAATTTTTTTACTCCCAGAAAAAAATCTTGGAATAGTTCTTGATTAAATTTCCAATAGTATGAGAATAGTGTATGAAAGATCTCACCTGAATAAAATACATTTGTTTTTACTAAAA EMBV3_06109 CTGAGAAGTCTTCTTGGAGGGATTGCCCAGCTGCCTTGGCTGTCGAAGAGCTTGGCTTTG Variant GeneID:538509|C13H10ORF97:NM_001076107:136_cdna 348^521 3 EMBV3_07569 GeneID:538509 13 GENE C13H10ORF97 MGC139777 chromosome 10 open reading frame 97 ortholog EMBV3_22517 GACCCTCTGGGGATGAGACCAGCAAAGCTCCTGGCTGACAACTAAACCAGTACATGCTAT Gene GeneID:516087|SCARA5:NM_001102499:52_cdna UTR3_Alt 2 NULL GeneID:516087 8 GENE SCARA5 MGC139192 scavenger receptor class A, member 5 (putative) EMBV3_10583 GCTGGAATCTGTCTTCTTATCATCATTCAGGTACGGAGTTTGAGGGCGCAGTCATAGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02469 TGTAACAAAACCCAGCACGTTATCTGCACTAAACTCAAGGAATGTCCCATTTGCCTAGGC Gene BVT0102_378236 + 0 NULL GK000007.2:443210-493447 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214955 TCONS_00214954 TCONS_00214956 1 XLOC_130801 Coding TCONS_00214954 XLOC_130801 Coding Coding CNOT6 7:490409-575093 j TSS160653 6843 2 TCONS_00214954_5 286 0.00599152418529885 12 0.91933445910041 8.43519296055301e-07 1.8332619110462e-11 7.02895955403478e-09 6.58580581137691e-10 5.84269687662981e-05 1.51760737050039e-05 1.29274117399414e-09 0.000169224457278825 4.79428623133106e-09 1.15333380237546e-10 1.92080997171692e-10 7.19356188023997e-05 4.13841671260017e-05 1.08186575346729e-09 4.40079740659431e-08 7.63587100821493e-07 0.00233924913321318 0.00307986869154699 0.000108385228827982 3.68723695415979e-05 2.20142262687311e-06 7.09221794087459e-07 2.09467736016911e-05 3.97742151010031e-08 0.000362730503607946 2.18214262820101e-05 6.31767943233189e-10 0.000109050307166158 6.06627837801399e-07 8.70593772368498e-05 XM_005208378.1 CNOT6 PREDICTED: Bos taurus CCR4-NOT transcription complex, subunit 6 (CNOT6), transcript variant X1, mRNA. 0.0 1.099e+04 98.86 0.904720151980126 NM_015455.3 CNOT6 Homo sapiens CCR4-NOT transcription complex, subunit 6 (CNOT6), 0.0 3452 87.58 0.4056700277656 TCONS_00214954_5 sp|Q9ULM6|CNOT6_HUMAN CNOT6_HUMAN CCR4-NOT transcription complex subunit 6; 0.0 583 97.55 0.996503496503496 4 coding 0 0 0 0 0.0307750444229077 0.83660116608766 0.0307750444229077 0.83660116608766 CTGGGGGAGGGGGACGGCGGCCGCCGCCATGATGCTTGTTTGCTTTCAATGAAAACAAGGGGGACGCGGAGGAGGAGGAGGCGGCGGCGTCGGTGGCGGCGGCGTCGGCTGCGCGGAGGCGAAGGCAGCGGTGGGTGCAGCGAAAAGGGAGAGGCCGGAGGCCGAGAGGCCGAGAGGGCGTAGTGGCGGCCCGTCGAGGAGGCTGAAGCGGGCGGCTGACGCGGTGGATCTCGGAGGGGGAACAAAGAGCGGCGGCTAAGGCGGCAGAGGAGCGGCGACGGCGGCGCTGCAGCTGCGGGCGGGACTGGTATGGTGGTTCCACAGGTCAGACCCCGCTGCACTCACAGGGAGGAGGCGGCGGCAGCGGCGGAAGAAGGCGGCGCACCCCAAGAGGCATGCCCAAAGAAAAATACGAGCCCCCTGACCCTCGGAGGATGTACACAATTATGTCCTCTGAGGAAGCAGCAAATGGAAAGAAATCTCATTGGGTGGAGCTTGAAATAAGTGGAAAAGTAAGAAGCTTAAGCTCATCTTTGTGGTCACTAACTCACTTGACAGCTTTGTATCTGAGTGACAATTCCCTGTCCCGCATTCCTTCAGACATTGCCAAGCTTCACAATCTGGTGTATCTGGACCTGTCCTCTAATAAAATCCGAAGTTTACCAGCAGAACTCGGAAACATGGTATCACTCAGGGAACTCCATTTAAATAACAACCTGTTACGAGTTCTACCTTTTGAGCTGGGAAAACTGTTTCAGTTGCAGACTTTAGGCCTGAAAGGAAATCCACTTACCCAGGACATATTGAACCTCTATCTGGAGCCAGATGGAACAAGAAGGCTACTGAACTATTTGCTTGATAATTTGGCAGGTACTGCAAAAAGAATTGCAACAGAACAGCCACCTCCAAGATCTTGGATTATGTTACAAGAACCAGACAGAACACGGCCAACTGTTATATGGCTACTGTCCATCATGGGCACTAAATTGGGACTACAGGAAAAAGGCCATTATTCAAGAAATCTTGAGTTGCAATGCTGATATCATAAGTCTTCAGGAAGTTGAAACAGAACAGTATTACAGTTTTTTTCTGGTAGAACTGAAAGAACGTGGCTACAATGGATTCTTTAGTCCTAAATCTAGAGCTAGGACAATGTCAGAACAAGAAAGAAAACATGTTGATGGCTGTGCAATATTCTTTAAAACAGAAAAATTTACTTTGGTTCAGAAACACACTGTTGAATTTAATCAACTAGCCATGGCAAATTCAGAAGGGTCTGAAGCCATGCTGAACAGAGTCATGACAAAAGATAACATAGGAGTTGCCGTACTGCTAGAGCTTCGAAAGGAATTGATTGAAATATCATCTGGAAAGCCACATCTTGGAACAGAAAAGCAGCTTATTCTTGTGGCTAATGCTCATATGCATTGGGACCCTGAATACTCTGATGTGAAGTTGGTTCAAACGATGATGTTCCTCTCAGAAGTGAAGAATATTATTGATAAAGCCTCGAGAAGTCTCCAGTCCAGTGTATTAGGAGAATTTGGAACTATTCCACTAGTGTTATGTGCAGATCTTAATTCTTTGCCGGACTCTGGTGTTGTAGAATATTTGAGCACTGGTGGAGTAGAAACAAATCATAAAGACTTTAAGGAACTGAGATACAATGAAAGTCTTACAAACTTCAGCTGTAATGGGAAAAATGGGACAACCAATGGAAGGATCACTCATGGCTTCAAGTTAAAGAGTGCCTATGAGAGTGGCCTGATGCCTTACACCAATTACACATTTGATTTTAAGGGTATAATTGACTACATCTTCTATTCTAAACCTCAGCTGAACACTTTAGGCATCCTGGGACCTCTGGACCACCATTGGCTAGTTGAGAACAATATCAGCGGCTGCCCACACCCACTCATCCCCTCTGACCACTTCTCACTTTTTGCACAACTGGAGCTCTTACTGCCTTTCCTGCCCCAGGTTAATGGCATTCACCTTCCTGGCAGGAGGTAGTCAAGTACCTTCAGAGGATGACCTCAGTTTTACTCGTAAACTTGTAAAAATTCTGAATATAGGGGAGTGAGGTATGGCCACTTAGATTTGTTTATTTGTTTGTTTTTTCTTAATGATGATTTGAGTTTTCAGTCTGATCATTTGATAAGGATATAGTATGAAAGCCAGGTGCTAGCAAACAAATTCTGAGCCCAGTATGCTTTATATACTGTTAGACAGGGATTGGTGTGTTTGCACCTATCTTTAATTTGTTGCAAATAATTTTCCTGTTTCTTCTATCCAATATAATATTTTCATGCCTTGAAATAGGAAACTGAACAGCATATTCTCTTTGCACAGAAATCTGTAGCACTACTTTTTTGAGGCCAGTAATAACATCCAGAGATCATTCTTCCATACTTTACTCCCTCCTTTTTCAGACTTGTTTGTAAAATATAGAATTTGAATTTAGCCTTTATGATTGTATATGATCCACAGAAGACCTGATTTATGAAATTTTGTACTAAAAAAATCAGATTTGGAAATGATTGTATTGTAATCTAAGGCTAAGGTTTTTTTTACCTGTTTCATGTGTTATAAAGCTTGTAAAAGAAGTTGCAACAGACTTTCTCTGCTGATGATTTGCACTGTTAGGGTTTTGTTAGCCCTTTTGTACTACTTTGTTTTTAAATTGAGAACATTGCTCTTTAAATTTAACTCTGTTTAAAGTTTAGGACATTTGCTTGGACTAGAGACAACTTACCGATGAATTCCTGGATTTTTGCAAAAAACTATTTACCAGGACAGATAATCTGAGTAGTGAATGATCTGAAGGCATTTATGGACTGAATGTGTAATGGTTGATGTATGTACATTCTGATGTTTTTAAATCCTTAACTTTTTTAAGTTAAAAAATTATGGCTGCTTAGGTACAGCTTCTTAACTCCTTTTTGAGACACTTCTTGTCCTATCTCCACTGTGCCTGCCTGAATTTGTTCCCACCAAGCACTGCCTGTGCATGCAGAGAAAATCTGTGCATCCTCTTTTGTATTTTTTAAATACTGTTTAACATTTGTGAGAGTTTTATGAAAATCCTTTTGTATGAGCTGTGGGTTTTTTCCATTGTGAAGCATTGAATATCACATTTTGGAACGTGTTCATAGGGTGGGGAGCCCTGGGTCTTTGTTTGCCAGACCCAAGCACTGCTTCTTGGCGTCATTGCACAGTGCTGTTCGTCACCCAGAGTACTACTATCATGTGAATTCTTTTTGTTTTCCATGTATTCCTTAGTTTCCATGTTTTTAAAAAATCATTCCCTTTTTTTAAAAAAGAAAAAAAGTAATTTTCCGTTTATGAAGCAGTATAAAATAAATGAGATGTATTTTCAAAACAGGTCCCTAAGACAATACTTCAGATCATTTTTAAAGTGACCAAGTCATTTTAATATGTCAACCAAGATAAAAGATATTATACCTTGTATTTTGCCTGTAGTGCCATTAGTAGAATAGAGATTAAAGCCAGCTTTAACTTTGCAAAGTTAACTCCTATATGTTCTGTTCTCATTCATTCATTCTCTCAAAAAACAAATGAATTCAGAGGGAACTTGGTCTAACTGCTTTTGTTTCAGCTGCAGGCAGGGAAGCAAAAGGACACCATGTATCCAGTGAGCATTAAGAAGAGAAATTGTTGAATGTTAATAACAGTTTTTATACAGAGAATGAGTCATTTTGGATAATGACTTAAAATTTTATGAAAAATGTTTAGCACTTAAATGTGCTTATTCTAAGAGAAAATAAAATTACATACTGTTTAAGTAAAAGATTCTTTTTTTTTTTCCTTTAAAAAAAATTCTACAAAAGGTTTTGATCTTGAATCTTTGTCTGGGACCTGGTTTTTCCTTTGAGGTTTGCTTTTTCTTTCTTTTTTTTTTTTTTAAAGATTTTGTTGTGATAGTTTTTTATTTTTTGCCTTTTGTTTTAAGTTGTGCTGACACCAAACACATCTGGTTTATAATCAGTACATTGGAAAGCTGGTATTATTGATATAGAACCAATGCATAGCTTTCTTTAGGGTTTCTTTTTGGGTTTTTGTAAAGTGTGAATAAAAGGTGTGTTTACTCATTTTTCCTAAACACTGTGTTGGTAGTGTGCATCATGACAGTTTCCAGCAAAGGCAAGCTGGAGCTGGCTGGACTGAGGAGATGAAGGAAACTGCTTGAGCTTTATGGAAGAAGGGGAGAAGCACTTACTCTGTTTTTAATGGAGGATGTATTCTTTTCATAGATGCTGGAACTAGAGTGCACTTGTTAGATGCTAAAGGTTTGAGCTTTACACAAAATATTTTCATCTGTATTTGTTATTGTCTACAAAATATTTTAATTTGGAACCAGCATACTAAGATATAATGGCTGGTTATGTCTTGAAAATATTTGTTCTTGCCTCTTCTAGGCATACTGCATTCTGTGGGTCAGTTTGAACAGCTTCTCCACCTTATTAGATAGTGATAAATTGAACCAGGATTATAGATTTACAACCATAAGCTTCAAAAGAGAAAAAATAATTTCAGTCTATAGTGAATAAATGATCACACCAAAATAGACTGAAACTTTGGTTAAGCAAGGTTTGTGTTTTAAATATTTTCTGTGTTCTGGATAATTTCCAGTAATCCGTACTCCCTAAAATGCAGTAAAAAACAAAAAAAAACTAGTAAGTTTTCACAGTATAGGTTTTCTTCAAAAATTCTGTAACAAACATATTTAATGTGGTGTTGCCATAATGTAATTTCAGTGTTCTTACAGGATAAATCCATCTTATGAATATTTTGCAGAAAATTTGGGGTATATTTTCTTTTTAATGATCAGAAATTCAGAGGTGCTCAATTCCTTGTAAAATCTCTTGACATACAGTTTACTGTATTAGTGGCTGATTATTTATGCTTTATGAACTTAAATAATGTTCATGAAAATTAACTTACGGCATAATTTTAAGTTGTAGAAATAATTGTTGATTGCAACTTAACAGTCCTAGAAGATAAGCAGGGAACAACTCCAAGAAGTGTTTTCTATTTTACTTGATTTAGTGACAACCAGGAAAACTTGAGTTAGCACTTTGAAACCTAAGGACATGATTAAATTGGGTGGAATGCACTTCTAAATGTTGAAATTAAAATTTCAAAGCTCTTCTAAGATGTCAGGTTTTCAATAATAAGTTTTAAGTTTTTGTATTCCACTTTTTACTACTTAAACTTACAGAATTTCCATAGTAACTTTTAAGGTTTGGGGGTTATGCTATATAAGTACAAGAACCATCCTGGGCAAAACAACAATTTACAGCAGATTTGTTCTTTTAATGAAACAATAAGAATACCCAGCAGAGATGCTGCAGAGAATTCAAAGAACCTTTATAGCAATTGTTTATCCCCCACTTGTAAACAGTGTTTTAAGATGTTCACTTTGCTCTCTTCGGTTACATAAATTTTAGTAACCATTCTATTGAAATAGTGTCTAAAATAGAGTATCTAGTCTTTATTCACAGTACATTATATTATGTAATGCACTGGACTAACTTTTGTTTACCATTCATGTAACAAAACCCAGCACGTTATCTGCACTAAACTCAAGGAATGTCCCATTTGCCTAGGCAGCTCTTTAATAAGGGTAATGGGAAACTGAATATGACCTATGGACTGATGGTAACAAGGGCTTTTACTGTTCTTTTCAGTGGAACCTTCATTGTAACTAGCTAGTATTATATTTATATACAGGGTCTCTTTTCTTTACTGATGTATTTTCCTACTCATAGCCAACCAATAAATTCAATTATCTGTTTCAAATATTTTTAAAGTGTAATTTGTATAGCTGTAGTACTGAGGTTTGAGGAGATACACGTTAATCAGCAGACCACCTGTTTAAAATTCTGAGTTCTCTGGAACAGAGTTGTAACTCTTTGAAAGGGAAGAGTGAACAGGGCCCATGATGTGAGAAGATGGTGTGAAATTAAGGATCTCCTTATTGCTGTGTTATCCTGTGTAACACATCTTTGCCAAAGATCAGTTTTATATTTAGGCAACTGATGGTCCTTTTGCATTTAGGTTTTTTGTTGTTGTTACCATATACCTCATAGCATAAGAAATGGGCTCATGTGTCTTTCATCCTTTGGAATGAGCTTGACGTATTTTGAATAAATGCTTTTAAATACAGTAGCAAACATTGTATTGGTGGGGTTATACTAATTAATTAAATGTTTTAATTGTTACATGTATATTTTGTTGTATATATAAACTTTTAAAATGTCTGATTTCTCAACTCTTCAGAGCATTACGTCTATTTACTTTTTAGAAACTACTTCTTTAATAAATAAATGTAAATTTTTATGTAGATGCTGGGAAAAAAATCCTTTAAAAATACAGCACAATTTAGATAAAATGTTTGCTGAGATGTCCAGTTTTTAAAGCAGGCATTTTCTAAATAATCGTTAATATATAATTTTACATCTATAACAGAAGAATTTTGCTAGATATGAAGAAAGATCTCTGGGATTACAAGGTGACTGAAGACCAGTTTCTACAGTTACTTTAGGAACATTAACATTTTAAATCAAATGAGTACGGAGATGTCCATTTTCTCACTTTCTTTGAACTGCACACTTCAAATAACTTGAATCTGTTCAAAAACTACTGAATTATTTTGGGCCTGTCATGAAAAACTTTGTTCACTATACCAACATGACTGTTAAGTGATCCCAAGAGCTCTTACTGCCAGATACTTTTCAGGCTTACCAGTAAAGTGAGTTTAAGCTGTGGGATCTCAGAGCCTGCTTCATTAATTCATTAATTAAAGACTTTTGACTCTTA EMBV3_03173 CCAAGCCCAGGAGCCAGGGAACCGACGACCGACTTACATCAGAGGATTGACAGGGTCCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03614 CAGAGAAGGTACAGAACCAGGAGGGACCACATGCTCAGACAGGGAATAGGAAACAAGAGA Gene BVV0102_022749 + 0 NULL GK000003.2:34216173-34221091 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169536 TCONS_00169529 TCONS_00169532 TCONS_00169530 TCONS_00169527 TCONS_00169535 TCONS_00169533 TCONS_00169537 TCONS_00169531 TCONS_00169528 TCONS_00169534 1 XLOC_103389 Coding TCONS_00169530 XLOC_103389 Coding Coding SORT1 3:34150753-34218238 = TSS126913 7076 1 TCONS_00169530_4 832 0.0206331260599209 20 0.895441882520301 0.000341800888154775 0.000704751430958974 0.000994026920887169 0.000807954619922983 0.000668587240249804 0.000275601398091703 0.000231133901801873 4.71679026568192e-09 0.000873752045538156 1.07334889633127e-08 5.36590192433996e-12 1.99070994007741e-11 1.96038459939184e-05 6.27290446588795e-05 9.78924236950998e-07 0.00030827207327649 7.80404714974771e-12 2.57124525110492e-08 0.000898232681271171 0.00197489149495161 0.000497673410350685 8.30673663381315e-05 5.14490910001529e-11 6.55227289590821e-08 0.000737606660009178 0.000378779610160416 0.000613515992677566 5.56665563106819e-11 6.22575112087725e-06 5.91373369346925e-16 XM_002686189.3 SORT1 PREDICTED: Bos taurus sortilin 1 (SORT1), transcript variant 1, 0.0 1.260e+04 99.99 0.987987563595252 NM_002959.5 SORT1 Homo sapiens sortilin 1 (SORT1), transcript variant 1, mRNA. 0.0 4919 83.32 0.651780667043527 TCONS_00169530_4 sp|Q99523|SORT_HUMAN SORT_HUMAN Sortilin; 0.0 1568 94.83 0.998798076923077 1 coding 0 0 1 1 -1.06352055307406 0.0498446078436038 0.0166359761579265 0.732542387997471 AGAGGCCCGGCTCCGCGTATCCAAGGAGCGCCGGGCTCCGGCTCGGGGGTGTGGCGCGGCGCCTGCGGGGGTGGGCGGGAGCGCCCGGCTGCAGGTGTCCTAGGCGTAGGCATTCGGCGGCGATGGAGCGGCCCGGGGGAGCAGCGGACAGCCTCTCGCGCTGGCCCCACGGCCTCGGCCTTCTTCTCTTCCTCCTCCAGCTGCTGCCGCCGGCGACACTCGGCCAGGACCGGCTGGACGCGCCGCCGCCGCCCGCTGCGCCGCTGTCGCGCTGGTCCGGCCCCGTCGGGGTAAGCTGGGGGCTGCGCGCGGCCGCGCCCGGGGGCCCGGCTCCCCGCGGCGGCCGTTGGCGCCGCAGCGCGCCCGGCGAGGACGAAGACTGCGGCGGGGTCCAGGACTTCGTTAGCAGGCTGGCTAACAACACACACCAGCATGTATTCGATGATCTCAGTGGCTCAGTATCCTTGTCCTGGGTTGGAGACAGCACTGGGATCATTTTAGTCTTAACCACCTTCCATGTACCACTGGTAATTATGACTTTTGGACAGTCCAAGCTATATCGAAGTGAGGACTATGGAAAGAACTTTAAGGATATCACAAATCTCATCAATAACACATTCATTCGGACTGAATTTGGCATGGCTATTGGTCCTGAGAACTCTGGGAAGGTGATTTTAACAGCAGAGGTATCTGGAGGAAGTCATGGAGGAAGAATCTTCAGATCATCAGATTTTGCAAAGAACTTTGTCCAGACCAATCTCCCTTTTCATCCTCTGACTCAGATGATGTATAGCCCGCAAAATTCTGATTATCTTCTAGCTCTCAGCACTGAAAATGGCCTGTGGGTGTCCAAGAATTTTGGGGGAAAGTGGGAAGAAATCCACAAAGCAGTCTGTTTGGCCAAATGGGGATCAGAAAACATCATCTTCTTTACCACCTATGTGAATGGCTCCTGCAAAGCTGACCTTGGGGCACTGGAATTACGGAGAACTTCAGACTTGGGGAAAAGCTTCAAAACCATTGGTGTGAAAATCTACTCATTTGGTCTTGGGGGACGTTTCCTTTTTGCCTCTGTGATGGCTGATAAGGATACAACAAGAAGGATTCATGTGTCAACAGATCAAGGAGACACATGGAGCATGGCCCAGCTCCCATCTGTGGGGCAGGAACAGTTCTACTCTATTCTAGCTGCTAATGACGACATGGTGTTCATGCATGTAGATGAACCTGGAGACACTGGATTTGGTACCATATTTACCTCGGACGATCGAGGCATTGTCTATTCCAAATCCTTGGACCGACATCTCTACACCACTACGGGTGGCGAGACAGACTTCACCAATGTGACCTCCCTTCGTGGGGTCTATATGACAAGTGTGCTCTCAGAAGATAATTCTATCCAGACTATGATCACTTTTGACCAAGGAGGAAGGTGGAAGCACCTGAGGAAGCCTGAGAACAGTGAATGCGATGCTACTGCAAAAAATAAGAACGAGTGCAGCCTTCATATCCACGCTTCCTATAGCATCTCTCAGAAACTAAATGTTCCGATGGCCCCACTGTCAGAGCCTAATGCTGTTGGCATAGTCATTGCCCATGGTAGCGTGGGGGATGCCATCTCCGTGATGGTCCCAGATGTGTACATCTCAGATGACGGGGGTTACTCATGGATGAAGATGCTGGAAGGACCCCACTATTACACCATCCTGGATTCTGGAGGCATCATCGTAGCCATTGAGCACAGCAGCCATCCGATCAATGTGATTAAGTTCTCCACAGACGAGGGTCAGTGCTGGCAAACCTACACATTTACCAAGGAGCCTATCTACTTTACGGGCCTGGCTTCAGAACCCGGAGCTAGGTCCATGAACATCAGCATCTGGGGCTTCACAGAATCTTTCCTGGCTCGCCAGTGGGTCTCCTACACCATCGATTTTAAAGATATCCTTGAAAGGAACTGTGAAGAGAAGGACTATACCATCTGGCTGGCTCACTCTACAGACCCTGGAGATTATGGAGATGGCTGCATTTTAGGCTATAAAGAACAATACCTCCGGCTACGCAAGTCATCTGTCTGTCAGAATGGTCGAAACTATGTTGTGACCAAGCAGCCGTCCGTCTGTCCCTGCTCCCTGGAGGACTTCCTCTGTGATTTTGGCTACTTCCGTCCAGAAAATGACTCCAAATGTGTGGAACAGCCAGAACTGAAGGGCCACGACCTCGAGTTTTGTTTGTATGGAAGAGAAGAGCACCTGACGACAAACGGGTACCGGAAAATTCCAGGAGACAAATGCCAGGGTGGCGTGAATCCAGTTCGAGAAGTGAAAGACTTGAAAAAGAAATGCACAAGCAACTTTTTGAGTCCAGAAAAGCAGAATTCCAAGTCAAATTCTGTTCCAATTATCCTGGCCACTGTGGGATTGATGCTGGTCACAGTCATAGCAGGAGTGCTCATTGTGAAGAAATACGTCTGTGGTGGAAGGTTCCTGGTGCATCGGTACTCGGTGCTCCAGCAGCATGCAGAGGCTAATGGTGTGGATGGTGTGGATGCTTTGGACACGGCCTCCCACACTCACAAAAGCGGTTATCATGATGACTCAGATGAGGACCTTCTGGAATAGCTCCTCAAAAGAGCTGGGACCGAGTACGAATGATGGACCGCAGTACCTCCTACACTCCCTGTGGCTCCGACTTAGGGAAATAAATTTCCCATTGCGAAGGACCCAGCTCTGTTTCTGCTGCTTCCATCAAAGCCAAAAGGACCTACACTAAAGAAATAGGGGGGTGGGGACCCGAAACACTCTTGCCAATTGGCTCGGAGAAGAGAGGGGAAATTTTTAATTCTTTAACTTTATGAGTTCTGTGTTTTTGCAAGGTATGAGCCCTTTTTGGTTTTGGTTTTTAAGGGAAATGAAATGGAATTGAAGGGAACTTTTCACTAACCCCACAGTCACATGTTTTGCGCGGCGCCTACCCCAGGGCACCGGCCAGCTTCGTCATCAATTCTCATGAAGCCCTCGGTGCCGTCCCTGGGCTGTGCCATCCCTGGACAGTGTCAGCACCACGAAGCAGCTGCAGAGATGAGCAAAGAGGCTGCAATGACTGGCACAGCCTGGGCAGCCTCTCTCCCTCTGGGGCCAGCCCTGCTCCAAGAATAGTGCACACCAGCTCCTCACATAGATCACTGCTTTTTGTTATTTCTTTCAGGAGCCATAGGCCACAGTGATTTTTCTTTTCCCCTGTTTAATTAGGCAATACCCTTGTTAATTGCCCTTTGGCAACTAACTTACATGTGCTTCCAAGACACTAAATCAGGAAAACCAAAAGGGCAATATTTTTAACTTGGGGCAGGAAGAAGGGAACAGCAGAGAATTGACTAGATTTAGCACCTATTAAAGGAGAAATTCTTGCTTCTTCCAAGATCTTTCAAGCCATGCCTTATGTGTGTGCCAGTGGACTTGCTCAAGGATGGGGCTCAAGCTGAGTACCCAGGCTGAGCAACCTCTTCACTGGAACGGCTGGTGGCATGCACAGCACAGCCTCTGAGGACGACTCATCCGTGAATCATTAGAATGGCTGCTTATTCGCTTCCTCTTAGGTTGCTGCTCTACATGGAGCTGTGACTAGACATGTTTTCAGTTTTAAGCTTTAAAAAAAAAAAAATTGAGTTTTGTTACCAAGTTCTCCTTCTTACCCCTCCACTTCCCCAGCTTTGCCAAGTAATTTGTTGGCTTGAAACTTTGAGCCAAACCAAGTGAAAAACACGCTTCTAGTGCAGATTGATGTTTTGTGTGATACATTAAGTTCATATTTTACATTTAATAAAATGTTCCCTTTGACATTTTTAAAAAATGGCATAAATTAGAAAATGTAGCGAGGCGGATTTTTGGGTGGCCAGACAGTGATGGAAAGCTGTCGTCATTAGTTTTAGTACAGCTTGACTGTTTGCTGTACTCGGACACAGTAGTGCGTTCCCAGTCAGCACAGCTACTGTGCTGGTCACGGTTTCTCCCAATAGTGATGACTGGGGATGTTCTTTGGTAACTGCCATTTTGCTGCTGGTTCATTTTATGGCTAGAAAGTCAGGAAAAAGTAAATGTGCCAAATGAACTTTTGTCAGAATGTGTGAGCAGATGGCTGAATTGTCTTCTCACCAGAATGGATTAACAGCAGTAGGGAACGCAGGGGAGGGAGTGGATGGAGAATTTTAAAGAAACTTTGAAACTGCAGTAAGATTAACGTAAGTCAGGGAACTATAAAGTTAAGGCAGTTTTTGTAAAGAGAGTTCATATTTGTTAGAGCCAGAGAGCACTAGTTTTTTAGGAAAATCTCATTCCTTTTGTAAGGTTTTTAAATTGAAAGTAATTCCAAAGATACACCAGCTCACAAATGATCAAAAAGTCTCAGCTTTTATCCCATTCACCCTCACCTCCTGCCCCATGTGAATTTGATGCCCAGAGAAGACCTGCGTAGACCATACACTCTTCTCCCCACATGCACCCACCGAAGTAGATGTGCCGACATACGGTAATTCTCTGATTAGTTTTACATGTAAGAGAGTTAATATTCTTCTCCAACCGTGTAAGACTCAGGACAGTGATACCTGGGGTTTCTGTAGAACTTGGTAGTTTTCATGGCACTTTTTCCCTTGCATTATGTCATTTGAACCTCACAGCATTCTTGTGAGATAAAAAAAAAAAACCACAGGGTTTGTAATCCCCATTAGAGATGGAGCTGAGGCACAAAAATGAAGTAAAGGTGTCAAGGTCCCTGAGTCATGAGTGGTGACGGTGATTGTCTTCGGATCTCATGCACTTTGATGGATGCTCTTGCTGCCAGGTGGGAGCAGGCTGCTTTCTTACAAATGTCTTGCAGTTCTTCAGGGCACGGGTCAGTGGCCTTTCTTTCAGAGCAGCATGTAGAGCTCTTTTGCCAACTTAGTAAACAGGAAATTTTTCGTGGCTGGAAGCAAAAGTAATGGTAATTTTGAGTATGTGTTTAGAAATCGCCCCTTACCTCATTGAAGGTCACGGTGGTTCAAGAGTGTGGGAATGGAGTCTCCACTGATGAGTCACCCTCTCCGTTTCCCTTGTCCCCCACCCATGACTGGCTGGAGAGCTTAGTCAGTTTGAGGACTGCTAGCAAGCCTGGCTGGCTAGCCTTCCGCATCTCACAAGGGTATGTCCCCGGCCCAAGATGAAAACAGCCTAACAGAGCCACGATAGCTCCTAAGAAAAAAAGATTTCTGATTTGTCCTACTGATGTCAGGTTGGAGCATTATCTCTGAAAATAAAGTGTAGTGTCAGGCTTAATAGCACAAGGGACTGTTTCAGTAATAGAAGTTAGCGTCATAAGGTAGGTTGGACATAGCAGACTGTCCAGAGTGATCTGAGCTCTGAAATCCAGGTGGTGAACTCACCATCTTTCATGCTCTGTGGACAAGTATCTTGGACTTAAGAGGGCTTTTGGTTTTCAGTGAGACCTGAGACCAGGGATGCATACGCCTAAGCTGTTCATCGAATGGGAACGCCACTTGGACTGAAAGTGTTTGGAGGACTGTGGCAGTTCTAGGCTGGGCTCAGGAGATTCAATAGATTGGCTGTAACTAAAGCTTTAGAATTTGTCATCTGCCTCTGAATAGGCTTTCCAGGGTGTCTGTCTCATTCTTAGGTTTACCTCTGGGCCTCTGCATGCCGAAGCTGGCCTTTCATCCCTGGCAGATCGGTAACGTGCTGGCCACCACTGGCTCTGTCAACCACAGCTGGTTCTCCCGTGGCCTTCACCATGGCACAAGGATAGAGGAGTGCAGGGCGATCCACATCCACTCCATGTGCAGGACTGGCCTGGCTTCAGTCTTTGTTTTCTAAGCAAGTGATTCCAGTAGAGAGTTTCTTGTTTCCTCTTAGGAGAGCTTTAAAGAGCCCTGCTTCTCTCTGCAGGGGCTTGGAGCTCACCCTGCTCACTGTTGGTACCGCCGCCTTACCCCACATTAACCTGGATACCTAGAACTGCTAAAATAGGAAGAGCTTCTGCTTTTCACCTTTGCTACTACCTTCCCTCAAGCAGATAAATAAACATGGACTTACATGTCCTTCAAACAAAAACCAAAGTTTTGGATTTCCACATGGTAGTGATAGGGAGGCCAGACTGTTCCATCTGCCACCAGTTTGCCCAGCTCAGGTTGCACCAGGGACACCGTCCTGCCCCAGGAGGGCCAAGGCCTCGCCCTCATGGAGGGTGATTGAAATAGCAGGAATGTGTTGATTTCTTGGCTACTTTGCATTATAACAAAGAAGAATCAGAAGTCTAATTAGAAGTTGTCTTCAGCAACCTACTGTGTGCATTTTTTTTCACACCGGTACATTCTTAAGCATCCTTGTTTATATAGAATAACATAAACTAATCTGTACCTTTCTATATATATATATATGTGTGTGTGTGTACATATATACATGTATAAACTGTATAGTGTACATGTTAATGATATGCCCAAATCCTTAATGCAGTTCTCATCCTCCGCATGCCCTCAGTTTGTGGTCACGTGACTTGAGTGTTCCTGATGATTCTGCCCACCTCCTGTGTTTGGACGTCTAGGGAGGAGGGTCGGGTTTTGATGGTACCCTCCTCATCCTCATGCACAGATATGCTCAGGGTCCCCCTGTGTGCCTGGTATCCATCCCTCTCTTGTTTCCTATTCCCTGTCTGAGCATGTGGTCCCTCCTGGTTCTGTACCTTCTCTGCCTCCTCCCCAAGCTGTCAGATAGCCTTCCTACTCAAATCTAAAGCAGTATTAAGATCATTACTGCATGTGCACTAAAAACCCAAGTTTTCTGTTCCCTTGGGGCAGAAAATTGCATGTGAGGTGGAATAATCAAGTTTCAATGACCTATGTCAGTTGCACAACAAAGCCAGACCCCAGAATAAAATTCCACAAAATGGAAATAAAACTCAAATTTCTTTAGCACTGTGTAAATAAATCTGGATGTGTTTAACTTTGTACTGGTAATTTTCTGTATATTTGCAATATTTGGGTTAGAAATAAAACAGACTGGACTTTATTACCTGACCTACTAAAA EMBV3_31078 ACAGCTTTTCACGCTGCCCTCTTAAAAGATTTGACCCCTAACTGCCCGAGCCGGAAGTGT Gene GeneID:521998|ZNF746:NM_001035341:673_cdna Constitutive 0 NULL GeneID:521998 4 GENE ZNF746 MGC128817 zinc finger protein 746 EMBV3_01700 CTGGGTATTCATCTGTTGATGCTGAGTGAAGTATCCTGGGCTGTCTGTGAGTGTGTGGCA Gene GeneID:504367|MCM4:NM_001075158:17_cdna Constitutive 0 NULL GeneID:504367 14 GENE MCM4 MGC138087 MGC140484 minichromosome maintenance complex component 4 EMBV3_18444 TGACGTCAACCAAGACGGATTCCAGGGTAATCCATGGAGAGCAGCTGGGACTGCCTGGCT Gene GeneID:508490|ITGA3:NM_001101900:73_cdna Constitutive 0 NULL GeneID:508490 19 GENE ITGA3 MGC166158 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) EMBV3_16921 GAGATATGGAAAAAGGCACTCAGTTGGATGCTTTCGTTTTCTTGCCTTAAATATATCACC Gene GeneID:784894|TGFBR3:XM_002686233:245_cdna Constitutive 2 NULL GeneID:784894 3 GENE TGFBR3 NULL transforming growth factor, beta receptor III EMBV3_07690 CAGCTGGGGCGACTCGAGCTGTGTTGTTTGTCCTATCTTTAAATTGAGGTCAGAGTGTCG Gene BVV0101_044515 + 0 NULL GK000012.2:33583717-33620914 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14090 CATCATCCTGTTGGTACCTGGGATGGCAAAGAACACCTTTTGCAGGCTGTTGGGATTCTC Gene GeneID:536852|LYG2:NM_001099076:80_cdna UTR3_Alt 2 NULL GeneID:536852 11 GENE LYG2 MGC151738 lysozyme G-like 2 EMBV3_14871 ACTAGCTGAGATAGAGAGTACTCAGGCCCAGCTGAAGGATACCATCCAGAACCTGCAGCT Gene GeneID:540027|RASAL3:NM_001102236:110_cdna Constitutive 0 NULL GeneID:540027 7 GENE RASAL3 MGC152536 RAS protein activator like 3 EMBV3_33467 CCAGAAGTTCACTTTACTCCGTCAGCCTCAGATTTCCTCCCCGGTCAAATAGGGGGAATA Gene BVT0102_020937 - 1 EMBV3_05239 GK000005.2:104262268-104273437 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196217 TCONS_00196216 TCONS_00193152 2 XLOC_118269 XLOC_117399 Coding TCONS_00196216 XLOC_118269 Coding Coding NCAPD2 5:104244557-104273251 j TSS146057 5179 1 TCONS_00196216_6 1397 0.0245221085151574 32 0.82061826926428 0.000578955033554387 0.000197342827265149 0.000123196757590142 0.000152555504371169 6.61095248149584e-05 0.000138440433618754 2.61191221652908e-20 0.000168360691240656 3.20091349245765e-08 2.02368058024308e-18 2.71059084994023e-16 3.26969750272663e-14 8.73516556269028e-05 6.36759276228735e-05 9.63396234931779e-09 0.000126615128015199 2.24635995341167e-15 9.9127518851947e-05 1.1384616104804e-16 0.000702397108048536 0.000168213204403141 1.46132214671361e-39 9.80487090392675e-05 4.06073923287808e-05 7.71597571242637e-05 0.000223696269404608 0.000178788688822067 0.00010800377625607 2.46341944218502e-05 0.000120259123062692 NM_001206711.1 NCAPD2 Bos taurus non-SMC condensin I complex, subunit D2 (NCAPD2), mRNA. 0.0 8217 99.80 0.883954431357405 NM_014865.3 NCAPD2 Homo sapiens non-SMC condensin I complex, subunit D2 (NCAPD2), 0.0 5054 86.56 0.814636030121645 TCONS_00196216_6 sp|Q15021|CND1_HUMAN CND1_HUMAN Condensin complex subunit 1; 0.0 2485 87.08 0.999284180386543 4 coding 1 1 1 1 0.00570171549663933 0.967065036718438 -0.0141650837980185 0.839229932063503 CACCCGTTCTTATTTCCTTGGGCGTCCCTCAACTGAGGGAGATGAAGGTCCAGAACCTGGAGCCCAGAGCTTCCTTTTTCCGTGCCCCACAGCAGTTTTGCGCTATAGCTGTTTTTATTCCCCCTATTTGACCGGGGAGGAAATCTGAGGCTGACGGAGTAAAGTGAACTTCTGGACGTCACATAGCAGACGAGATGGCGGAAGCTGGACTAGAGCCTAAGCCTTCTAACTGTCGGCTTCTGTCCTCGGGGGTGACTGAATGGGTCACTGTCCCAGGGGCACGGCCACTGCTCAGCTAGGAACTCGACTCCTCCAGCAGGCACCGCGGAAAAAGAGGACTTTGTAGGGAAGAAGGCGGCCGCGAGTGCGGCGTGGGTGGGGGAGGGAGCTGGAATCTAAGTCCCGCCCTCCTTGGGCAGTCGGCTCCTGCGCTCTGATTGGTCGGTCTCTGCAGCGAGCGTCGCGATTGGGTCCCTTGCGGCCGTTGAGATTTGAACTCCACTTTTGTGGCTTTGCCCGCGCCGCGCGGGGCTCGGTGACGGGTGTTTTCCTCTGCCTGGCGTGTATTGCCCAGTTTCTCTCCCCGCGGGAGTGCTGCCTCGCATATTGGTGCATATTGTGCCCTCCGTGGGGTTTTTTTGTTTTTGTTTTTAATTCCAGCCCCACGACGCGAGTTGGAGGAACGGCGGGTGAAGCTCTCTTGTAAGCCCTGTGAGCCATTGGGAGAAAGATGTCTCCCCAGGTATGGGAATTCCATCTGCCCTTATCCCCAGAGGAGTTGTTGAAAAGTGGAGGGGTGAATCAGTATGTCGTGCAAGAGGTACTGTCCATCAGACATCTTCCATCGTACCTTAAAGCTTTTCAGACCGCCTTTCGAGCTCAGGGGCCCTTGGCCGTGCTGGAGCATTTTGATACCATCTACAGCATCCTGCATCACTTTCGAAGTATAGACCCTGGCCTCAAGGAAGACACACTGGAATTCCTCATAAAAGTGGTGTCCCGCCACTCCCAGGAACTCCCTGCCATCTTGGATGATGCAGCTTTGAGTGTGTCAGACAGAAGCGCCCACCTGAATGCCCTCAAGATGAACTGCTATGCTCTGATACGCCTCTTGGAGTCCTTTGAGACCACGAGCAGCCAGACGGGTCTCATGGACGTGGAGCTAGGCGGGAAGGGTAGGAAATCCCGGGCCAAGGCAACCCATGGCTTTGACTGGGAGGAAGAGAGGCAACCAATTCTTCAGCTTTTAACACAGCTGCTCCAGTTGGACATCCGTCACTTGTGGAACCACTCGATAATCGAAGAGGAGTTTGTCAGCTTGGTTACTGGCTGCTGCTACCGCCTCCTGGAGAACCCCACCATTAGTCACCAGAAGAACCGCCCTACCCGAGAAGCCATAACGCACCTGCTGGGTGTAGCTTTGACACGTTATAACCACATGCTGAGTGCCACTGTGAAGATCATCCAGATGCTGCAGCACTTTGAGCACCTGGCATCCATCCTGGTGGCGGCTGTGAGTCTTTGGGCAACTGATTACGGAATGAAGAGCATTGTAGGAGAGATCGTAAGAGAGATTGGACAGAAGTGTCCCCAGGAGCTGAGTCGGGACCCTACGGGGGCAAAGGGTTTTGCGGCCTTCCTGACGGAACTAGCAGAGCGCATCCCAGCCATCCTGATGTCCAGCATGTGCATTCTGCTAGACCATCTGGATGGAGAGAATTACATGATGCGCAATGCTGTGCTGGCGGCCATGGCAGAGATGGTGCTGCAGGTCCTGAGTGGGGATCAGCTGGAGGCGGCATCCCGGGACACCCGGGACCAGTTCCTAGACACTTTGCAGGCCCATTGCCACGACGTCAACTCCTTTGTGCGCAGCCGCGTTTTGCAGCTCTTCACCCGAATCGTCCAGCAGAAGGCTCTGCCCCTGATGCGTTTCCAGGCAGTGGTGGCCTTAGCTGTGGGGCGTCTGGCAGACAAGTCGGTGCTGGTCTGTAAAAGTGCCATCCAACTGCTCGCCAGCTTTCTTGCCAATAATCCCTTTTCCTGCAAGCTTAGTGACACTGACCTTGCTGGACCACTGCAGAAGGAGACCCAGAAATTACAAGAGATGAGGGCCCAGAGGCGAGCCACAGCGCCTTCCGCAGAACTAGACCCCGCTGAGGAGTGGGAGGCCATGCTGCCAGAGTTGAAAGCTACCCTGCAGCAGCTGCTGATGCTTCCCCAGGAAGGAGAGGGGATGTCTGAGGGCGTTGCCGAGACAGAGACCCCCGAAGAGGTGGAAGGACGAATCCGTCAGTTGCTAGCCAAAGCTAGTTACAAGCAGGCCGTCATCCTCACTCAGGAAGCCATGGGCCGCTTCCAGGAGTCTGAACCCTTCTGTCATGTGGACCCGGATGAGTCAGAGGAGACCAGGTTCCTCAGTCTCTTAGGAACCATCTTCAAAGGCCCAGCAGCTCCCACCCAGGAGGAGAATCCCCAGGCGGCTGCAGGGAACTTGGGCCCAGGAGAGACTGGCTGTAAGGACAAGCCCAGTGGGTCAGAGCCTGAGGAATGCAGTGATGAGCTGGTGAAGCAGGAGTTGCTGGTGCAATACCTACAGGATGCCCACAGCTTCTCCCTGCAGATCACCAAGGCCATTGGCATCATCAGCAAGATGATGTACGAACACACGACGACAGTGGTGCAGGAGGTGATTGAATTCTTTGTGATGGTGTTCCAATTTGGGGTACCTCAGGCCCTGTTTGGGGTGCGCCGCATGCTGCCTCTCATCTGGTCGAAGGAGCCTGGTGTCCGGGATGCTGTGCTTAATGCCTACCGCCAACTTTATCTCAAACCCAAGGGGGACTCCGCCAGAGCCAAGGCCCAGACTTTGATTCACAATCTCTCTCTGCTGCTGGTGGACGCCTCAGTTGGGACCATTCAGTGTCTTGAGGAAATCATCTGTGAGTTTGTGCAGAAGGATGAATTGAGCCCAGCAGTGACCCAGGTGCTGTGGGAGCGGGCAACCGAGAAGGTGCCCTGCTCCCCTCTGGAGCGCTGCTCCTCCGTCATGCTGCTTGGGATGATGGCACGAGGAAAGCCAGAGATTGTGGGAAGCAACTTGGACACCCTGGTGAATATAGGGCTGGACGAGAAGCTCCCACCGGACTACAGGTTGGCCCAGCAGGTGTGCCACGCCATCGCCAACATCTTGGACAGGAGGAAGCCTTCTATGGGCGAACGTCACCCTCCCTTCCGGCTGCCCCAGGAGCACCGCCTGTTTGAGCGGCTGCGTGAGATGGTCACGAAAGGCAGCATCCACCCAGACCCGCTCTGGGTCCCGTTCAAGGAGGCGGCTGTGGCCCTCATCTACCAGCTGGCTGAGGGCCCCGAGGTGATCTGCGCCCGGATACTGCAGGACTGTGCGAAGCAGGCCCTGGAGAAGTTGGAGGAGAAGAGTGACCACCAGGAGGCCCCCCAGGAGACGCCCGTGCTCCCCACCTTCCTGTTGATGAACCTGCTGTCCCTGGCCGGGGACGTGGCTCTGCAGCAGCTGGTGCACCTGGAGCAGGCTGTGAGCGGAGAGCTCTGTCGGCGCCGAGTCCTGCGGGAGGAACAGGAACACAAGAGGAAGGAGCCCAAGGAGAAGAATTCAAAGTCTGAGTCCACCTTAGAGGAGGAGATGGGGCTGGGTGGGGCCACAGCTGATGATACTGAGGCAGAACTCATCCGCGGCATCTGTGAGCTGGAGCTGCTGGAAGGCAAACAGACACTGGCTGCCTTTGTTCCACTTCTGCTTAAAGTCTGCAACAACCCTGGTCTCTATAGCAACCCAGAGCTCTCCACAGCGGCTTCACTCGCGCTGGGCAAGTTCTGCATGATCAGTGCAACTTTCTGTGACTCCCAGCTTCGTCTTCTGTTCACCATGTTAGAAAAGTCCTCATTCCCCATCGTTCGCTCTAACCTCATGATTGCTACTGGGGATCTGGCCATCCGCTTTCCCAACCTGGTGGACCCCTGGACACCCCATCTATATGCTCGCCTCCGGGACCCCTCTCAGCATGTGCGGAAAACAGCCGCCTTGGTGATGACCCACCTGATCCTGAAGGACATGGTGAAGGTGAAGGGGCAGGTGAGCGAGATGGCCGTGCTACTCATCGACCCTGCCCCTCAGATCGCTGCCCTGGCCAAGAACTTCTTCAACGAGCTCTCCAACAAGGCGAACGCCATCTATAACCTCCTTCCAGATATCATCAGCCGCCTGTCAGCCCCCGAGGGAGGCGTGGAGGAAGAGCCTTTCCACACCATCATGAAGCAGTTGCTCTCCTACATCACGAAGGACAAGCAGACCGAGAGCCTGGTGGAGAAGCTGTGTCAGCGCTTCCGCACGGCCCAGACTGAGCGGCAGTACCGGGACCTGGCGTACTGCGTGTCTCAGCTGCCCCTCACAGAGCGGGGTCTCCGAAAGATGCTCGACAATTTCGACTGCTTTGGCGATAAATTGTCAGACGAGTCCATCTTCAGCGCCTTTTTGTCCATCTTGGGCAAGTTGCGGCGTGGGGCCAAGCCCGAGGGCAAGGCTGTAATAGATGAATTTGAGCAGAAGCTTCGGACCTGTCACACCAGAGGTTTGGACACAGTAGAGGAACTTGAGGTTGGCCAAGGCAGTAACCAGAGAGCCCCGTCAGCCAGAAAACAGCCAGCTGCCGCTCGGCACAGGCATGTGGCTTCTACAGCCTCAGACGACTTTGTCACACCGAAGCCCCGCCGTACCACCCGCCAGCATCCAAACACCCAGCAGCGAGCTTCAAGAAAGAAACTCAGGATTGTCTTCTCGAGTGATGAATCCAGCGATGAAGAACTGTCAGCAGAGATGACAGAAGATGAGACACCCAAGAAAACCACCCCCATCCGCCGGGCATCTGCTCACAGGCACAGGTCCTAGGGGCAGCCTTGCCTATCCCAACCCTGCTGTGCACGTGTCTTATAAAGAGTGACCCTGAATTCATTCCTTTTGTAAAATGCTTGTTTGCCTGTCTCCTTGGTTTTTTAATGCATAAATGGTCATTATAACATAAGGCTTTGCTCTTAAACCAGCCCAACTGAACCGAGTTGAGCTGCTTTCCTTGGAATGTATATATATATGTGTGTTTGTCAGTTTTCTTGTTTTCTAATGAATAAATATTTTTATATAGTTTTA EMBV3_03238 CCAAGCAATGTCTGACTGGTGTCAGTGGCTGGTATCCAAAGGGCTGAACTGGCAAAGCAT Gene GeneID:508096|LOC508096:XM_002695799:366_cdna Constitutive 1 NULL GeneID:508096 19 GENE LOC508096 NULL similar to hCG2036610 EMBV3_34347 GTGCTGACCCCTGAACATAGTTGAAACAGAAAATAGGAAGATGGCAGCAAACCCTTCAGG Gene GeneID:616784|SSBIP1:NM_001078064:59_cdna Constitutive 1 NULL GeneID:616784 8 GENE SSBIP1 C8H9orf80 C9orf80 SOSS complex subunit C EMBV3_32123 AAGACACTGATTTATATATTGGGACTACAGGCTTCTGGGATCTGCTACAACAGCAGAACG Variant GeneID:100125312|UBAC2:NM_001103344:2_cdna 554^601 5 EMBV3_02860 GeneID:100125312 12 GENE UBAC2 MGC142780 UBA domain containing 2 EMBV3_13847 TGGGAGACACAATTGGAGGGGGTCAGTAGGGACAGGCTATACAGGGCATTGGGATCCATG Gene BVT0102_188512 - 1 EMBV3_32512 GK000007.2:8651747-8701375 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26044 CATGCCCCAAAGCAACTAAGCCTGAGCAGCAACTAGAGAAGGCCCACACAGCAAAGAAGA Gene BVV0102_306384 + 0 NULL GK000003.2:101631051-101641923 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179665 1 XLOC_109437 NonCoding TCONS_00179665 XLOC_109437 NonCoding NonCoding - 3:101633851-101634794 - TSS134424 943 2 TCONS_00179665_1 64 0.675503711558855 1 0 0 0 0 0 0 0 0 0 0 0.000239976064306962 0.000121377698564709 0 7.91107818218711e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.05573301464298e-05 1.54441391317703e-05 6.37566493396657e-06 XM_588706.5 LOC511385 PREDICTED: Bos taurus E3 ubiquitin-protein ligase NEURL3-like (LOC511385), transcript variant X2, mRNA. 2e-21 107 85.11 0.0986214209968187 0 noncoding 0 0 0 0 -0.137202507287157 0.292196041931172 0.0302201345901093 0.596054443449122 ATAAACAACATTTAATAACATTCATGTAAGAGCTCCAGAGAAGAAGTGATGGATTTCATTAGAAGACAGAATCAGATGATTCTAACTAAAGTGGCTCAGCGGGGACTTCCCTGGTGGTCCAGTGCTTGAGAATCTGCCTGTCAATACAGGAGACAGGAATTGGAACCCTGGTCCGGGAATGAGGATCCCGCATGCCCCAAAGCAACTAAGCCTGAGCAGCAACTAGAGAAGGCCCACACAGCAAAGAAGAGGCCATGCACTGCAACCAAGACCAAGTGCTGCCAAAAATAATACATAATTTTTTTAAAAAGAATAGGAAATCGGGATACCAAAGAATTAAAAAAAAAAAAAAAAAAAAAACAGCTCAGAGAAGTACTAAATCCTTAGGGAGAATAACGGTACAAAAACCAACTGAGAAGCATGTTGAGTCCTGTGTTACTGGAGTGTGAAGGGAAGAAAGAGATGAGACTCGCCTCGGAGGCTTTTAGAGGGTTTTACGTTGAGCAGCCATGAGAGGGTTCAGCAAAGGAGTGACATGATTAGATTGCTTTTGGCAGCCCCGTAGAGAATGAATTGAGAGGGAGAGACTACAGGCAAGGAGGAATCCAAGCAGGAAATAATGGTCGCTGGAACAAGGGTGATACTCATTTTCACCATTATTTTTATTGGCTGCATTGTATTACATTATAAGGCATTTCATAACTTGTATTCATTTCAAACCCTCAACAGATGGACATTAAGGTTGTTTACAAATTTTCTGTATTAAAAACTATAAATGTTATAATAAACATCCTCATGCATATATCCTTGCATACCTATTTATTTTCTTAGAATAACTTCCTAAAATTGCTTCATCAAACTGCTGAATTGCCCTCTAGGAAGGATGTATCAATTTTCACTCGCATTAGTGTCTATTTCCTAAACTCTTACCAACTCTGGGCAT TCONS_00170999 TCONS_00171000 . 3' 2678 TCONS_00170999 TCONS_00171000 . 3' 3620 EMBV3_00572 CAGAGTTTTAGAGGCAGATTGCCCGGGGTTGAATTCTAGGCTTTGCTCCTTAGTATCTGG Gene BVT0102_046796 + 0 NULL GK000027.2:33300220-33597666 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28539 AGTGTCCTGGGAAGATTTGCTTGCAGGGCGGGTGCTGTGTCTCCGTCTTAGTTGAAGTTA Gene BVT0102_046042 + 0 NULL GK000007.2:892403-958940 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18791 TTCTGCCTGAATTAGCAGTCCCGCAGTCCCAGCAGCAACGCAGAGCAACACTTTTCAACT Gene BVV0101_029640 + 0 NULL GK000028.2:19569185-19675612 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161763 1 XLOC_098650 NonCoding TCONS_00161763 XLOC_098650 NonCoding NonCoding - 28:19664063-19664694 - TSS121095 631 2 TCONS_00161763_2 76 0.27892234548336 1 0 0.00025874496123937 0.000302567455049227 7.33280420350211e-05 0.000210564561425956 0 0 5.54520846247697e-05 0.000103109239345878 0 0 0 0 0 0 0 4.18567151267886e-05 0 0 0.000318202264015185 5.69844490881947e-05 5.29208383658406e-05 0 0 0 0.000922333512120422 0.000122821228616831 0.000668556242669253 0 0 0 XM_005224449.1 RAB26 PREDICTED: Bos taurus RAB26, member RAS oncogene family (RAB26), 6e-52 208 85.71 0.277337559429477 NR_027182.1 JMJD1C-AS1 Homo sapiens JMJD1C antisense RNA 1 (JMJD1C-AS1), non-coding RNA. 4e-29 132 70.16 0.49445324881141 0 noncoding 0 0 0 0 -1.84556781367599 0.124060140282446 0.00183931108642707 0.984925697564248 TGTTTGGGGTCCAACTCTCTACTCGTCGCTCCCTGAGAAGTGGGGGGTTTGGGTGGGGGATTGAGTGAGGTGAAAGTGAAGTGTGCTGGTTCCACTCTGGGTCGCAAAACAAACTCCAGATTAACAGCCGCATCTCCAGAGTGATTTTCCCCCCCCCAGAACAAATGGCGCCCTGCAGTCTGAGTTAGCCCGAATTCTGCCTGAATTAGCAGTCCCGCAGTCCCAGCAGCAACGCAGAGCAACACTTTTCAACTGAAAACTAAGCCCACAGAACTCAGTCAGTGCAGAAACAAAGTACACGTCTTTAAATGAAAATGAAGAAAACACTGTCATCCTTTCATATTTCCTGTTTGGGGCGACACTCACTACACGTTCAATGGTGTCCAACTCTGCGACCCTATGGGCTATACAATGGAATTCTCCAGGCCAGAATCCTGGAATGGGTAGCCTCTCCCTTCTCCACAAGATCTTCCCAACCCAAGGATCGAACCCAGGTTTCCCACATTGCAGGCGGATTCTTTACCAGCTGAGCCACAAGGGAAGCCCTAACACTCAATACCGGTTTGGGCTATTCAGAGATTTACACCTCGCTACTGCTTTGTTTTAAGAAAGCCAAACACTCGGTTGAGGG TCONS_00160305 . 5' 371 TCONS_00160305 . 5' 371 EMBV3_40443 GTTCACCTTACAACTGCCATTTCCCCTATGTGGTTTTGTAAAGAACTGTCCTCATAGGTG Gene GeneID:540473|ASCL1:XM_002687640:801_cdna Constitutive 0 NULL GeneID:540473 5 GENE ASCL1 NULL achaete-scute complex homolog 1 (Drosophila) EMBV3_33768 CCAGAGTGTTACTCAAGACCAGCCAGACATACTCAGTGAAGTGGGGAAGGCAGTTACCCT Gene GeneID:781430|LOC781430:XM_002707708:17_cdna Constitutive 0 NULL GeneID:781430 10 GENE LOC781430 NULL similar to TRD@ protein EMBV3_01848 ACGCGAGGAAAAGACGGCTTGAACCTGTGTATCATATGTGACTTTGAAATGAACACCTTG Gene GeneID:767938|GBAS:NM_001077011:422_cdna Constitutive 0 NULL GeneID:767938 25 GENE GBAS MGC128997 glioblastoma amplified sequence EMBV3_17782 TGCCCTCATTTCCTTGGGTCAGGAGTGACTGGAAGAGGGTGTGATCAGTGCTTAGCCCAG Gene BVT0102_127509 - 1 EMBV3_25253 GK000013.2:42269927-42396586 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27097 TCCTTTGTGCCTCTGATCTAGTCCGCACACCCCTTCTCCAGAGATTTTATGTTGTGGCTG Gene BVT0101_072138 + 1 EMBV3_09813 GK000020.2:23538713-23550825 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13634 TGTGAATTTGTACTTATGGACTGTGGACTTCTCTGGGTGTCTCCTCCTTTACCTGTACCC Gene BVV0102_081957 + 0 NULL GK000003.2:581124-587033 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174999 1 XLOC_104782 NonCoding TCONS_00174999 XLOC_104782 NonCoding NonCoding - 3:584150-584537 - TSS129758 387 1 TCONS_00174999_1 69 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.58741774815188e-06 4.74111890507517e-05 0 0 0.000345901389179154 0 0 0 0.000481600896260925 0 noncoding 0 0 0 0 -0.112490422944636 0.37533843294228 0.0322116095999333 0.494438634575421 GCTTGTGTAGAGCTTTGCAAATTGTGAATTTGTACTTATGGACTGTGGACTTCTCTGGGTGTCTCCTCCTTTACCTGTACCCTTTTTCTGCAGACATGTCCTTTTCTCAAGCCTCCCTTCCCACAGGCTGAAAAGAGGAAGGAGACTGAGCCCACTGTGGCACAATCCATACCACAGTCACCTAGGTACAGTTATCCATGTACTTTTAATAAACTGCAAGAAAATTAGATTCATGGAATACTGTTAAATGACTGGGAAGTAACCAGGAAAGACACAACAAACATTGTTAATTCTAAGTTTCAAAGGAGGATTAATGAAGAGCAGTGCTCTCTTGCTTGGTCTACCCCACAACCAAAGTCAAAGGGCGGATGGTAGAGATTATCAGAC TCONS_00171682 TCONS_00171683 TCONS_00171684 TCONS_00171685 TCONS_00171686 TCONS_00171687 TCONS_00171688 TCONS_00171689 TCONS_00171690 TCONS_00171691 TCONS_00171692 TCONS_00171693 TCONS_00171694 TCONS_00171695 . 3' 2463 TCONS_00171682 TCONS_00171683 TCONS_00171684 TCONS_00171685 TCONS_00171686 TCONS_00171687 TCONS_00171688 TCONS_00171689 TCONS_00171690 TCONS_00171691 TCONS_00171692 TCONS_00171693 TCONS_00171694 TCONS_00171695 . 3' 2849 EMBV3_30473 CCAGCTTTCACAGTCCATCAAACACTTCTACTTCTCAAGGAGGTATTCCTCCTCCAACTG Gene GeneID:615728|SYPL1:NM_001110088:15_cdna Constitutive 3 NULL GeneID:615728 4 GENE SYPL1 MGC137623 synaptophysin-like 1 EMBV3_14494 GGGGCTGCAAGAAGGCATACACATCTGAGAGACTAACACAGTAAGAGTTGTACCACCCAG Gene BVT0102_067031 + 0 NULL GK000010.2:94559793-95430409 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015471 TCONS_00015466 TCONS_00015468 TCONS_00015469 TCONS_00015472 TCONS_00015465 TCONS_00015464 TCONS_00015453 TCONS_00015470 TCONS_00015463 1 XLOC_008488 NonCoding TCONS_00015472 XLOC_008488 NonCoding NonCoding - 10:94797818-94801168 - TSS10909 1713 3 TCONS_00015472_2 45 0.30122591943958 2 0.489101224246044 0.00374222349897831 0.00580158661242131 0.00362473969127621 0.00074544649166113 0.00185067748427487 6.45850392218503e-20 0.000735785789062591 3.14328964335413e-10 0.00110254033792655 0 0 0 2.88861716068982e-05 1.08481917802966e-20 0.000201735088926766 0.000153822322247722 0 1.61343175440135e-05 0.00241140477492395 0.00620628028631913 0.000108511245098048 0 0.000112340990732446 0.000454855833585405 0.00232939127174371 0.00199274986200813 0.00126710156868936 0 0 0 XR_236252.1 LOC101905627 PREDICTED: Bos taurus uncharacterized LOC101905627 (LOC101905627), 0.0 874 100.00 0.281961471103327 0 noncoding 1 1 1 1 -0.0545433137420915 0.746934971516634 -0.0337352998015148 0.533587784220692 ACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATAGCATCACACAGAGTCGGACACGACTGATTTGACTTAGCAGCAGCAGCAGAGGTGAATCTTGTCTCAGTTCCATGGAGGTAGGATATCAGGACATACAACGAAACAAGAGGGATACAAGTGCACAGAGGGGATGCATGTGAGGAGACGGTGAGAAGACAGCCACTGGAAAACCAAGGAGAGAAGCTTCAAGAGGAACCAGACCTGTCCACACTTGATCTGGGACTTCTAGCCTCCAGAAGCATGAGAAAGCAAATCTCTGTTAAATCACCCAGTCTGTTATATTTTGATATGGCAGCCCTAGCCAATCAATACGTTCCCCTCTCCTTTCTTGTTCTTTTAAAATTAAATCTACAGTCTTACCACTGGGGAATATCATGACAAAGCATTTGATATCGGGAGTTGATGAGTTGTTATTTAAAGGACCCTCTAATGTGCCATTCCCTGGAAGTTGTTGATTACAGTTAAATTCACTTAGGGGAACATTGAACGTGGGATCATGTTTGTGGCCTTCATTCTAGCAAAGCTCTCCTAAGGGAGCTGTGAGACTTAAGCCCTGACTAAGGGCCTCCTTGGTGGCTCAGATGGTAAAGAATCTGCCTGCAATGCAGGAGACCCGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTCTTGCCTGGGGAATTCCATACACAGAGGAGCCTGATGGACTATAGTGCATGGGGCTGCAAGAAGGCATACACATCTGAGAGACTAACACAGTAAGAGTTGTACCACCCAGAGCCCTGCAGTGGGGCCCTGGGATGGTCTAATAATTGCTAACATGACTCCTTCAATAATTAATGATTCAGTTGTTTTAAATGCCTTAATACATAAAAGCTCACATGTGGTGTCAGATCTCCAAATTATAACACAAAATAGATGTTTTGCAGTAACTTATATGGAATTAATTCCATCCTAGAGTTCTTGTAGAAATTAGAAGTCATTTAAAGACTGAGCTCTGATGGTTATGTGTCACTAGACTCCCTCTGTGGAACCATTTCCTTGTAAATTTTTGTAATCCATTTGTATTCTGTACACATGTGGTCTCTTGACGGCTTTGGTGGTTCTTAATTGCACTTCTCATAGGCAATCCCAATGGTAGGTTCCTTTCAACTAAACTAGTAGTGATGTGCCATCAAGCACAAAAACAAAAACAAACAAACAGAAAAAAAAACTGGTTGATTTAATTATTAATGGTAAATGTCCTTCTAGCTTCTTCCAAGAAAGCGAAAGCACATCACTTGACTAATAAGCCTTTTCAGTAATGAAATATAATTTTACTTGGTCAAGTTATTCTCCTAAAGTTTTAGTTCTTATTTATGGATTCTTAATCTCAGGTGCTTGGGATTGGCTTTATCACCCTCTTCATTTTCTGGAGTTCTACTATTGATCTCCCAAAGAACTTGTGCCTTTTAAGGGTTTTTGTTTTAATTATTCTCCATATTTCTCACTCGTGTCCCTCTTCACTTTTTGAAAATGTTCCAAAGTAATTTTTTTAAAAAAATCTATTTCCCAGATTTATTGAGATGTAATTGACATACAATTGTATAATTTTAATATATACAATGTAAAGATTTTATATATGTATATATTGCAAAATGAT TCONS_00018494 r 3' 629242 TCONS_00018494 r 3' 632591 EMBV3_18971 ACCCTCACCTACCCATGCTTTCAGTACCAGAGCCTCATCTGTCAGCACCAAAGGGGCCTT Gene GeneID:100138660|LOC100138660:XM_002688952:84_cdna Constitutive 0 NULL GeneID:100138660 7 GENE LOC100138660 NULL hypothetical protein LOC100138660 EMBV3_31323 ACCAACCCACCAACCTACTTACTACTCATCAGCCTCATTTGGTCCCTCTCAAGAACAGCC Gene GeneID:539042|LOC539042:NM_001098098:19_cdna UTR3_Alt 2 NULL GeneID:539042 15 GENE LOC539042 NULL similar to ADP-ribosyltransferase EMBV3_36224 TCACTGGTGCCCAAGGCTTTAGAAGGCTATATAACAGACATCTCCACAGGACCATCTTGG Gene GeneID:506114|TFDP2:NM_001075241:18_cdna Constitutive 0 NULL GeneID:506114 1 GENE TFDP2 NULL transcription factor Dp-2 (E2F dimerization partner 2) EMBV3_19789 ACTACGAAAGGAGTGGATTCAGTCAGAGAAATGGAAGCTGAGGACTGCACAGACACAAAG Gene GeneID:783256|BRIP1:XM_002695609:14_cdna Constitutive 0 NULL GeneID:783256 19 GENE BRIP1 NULL BRCA1 interacting protein C-terminal helicase 1 EMBV3_12970 ATGTCTGTGTCAGATTTACAATCACCAGTGTGTCTGCCTGGAATACAGCGTACCCGCACG Gene BVV0102_325517 + 0 NULL GK000008.2:102491161-102504430 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228902 TCONS_00228911 TCONS_00228913 TCONS_00228908 TCONS_00228907 TCONS_00228912 TCONS_00228903 TCONS_00228909 TCONS_00228906 TCONS_00228904 TCONS_00228910 TCONS_00228905 1 XLOC_138611 Coding TCONS_00228906 XLOC_138611 Coding Coding LOC513555 8:102501863-102627787 j TSS170545 9166 1 TCONS_00228906_9 1840 0.0284747981671394 52 0.92762243593307 0.000397512139938083 0.00027176321306263 0.000379074944974135 0.000243696822905913 0.000416071356302646 0.000553329724634001 0.000202695453881607 0.000284304566013401 0.000339727142461262 0.000203493080474648 1.38603291927614e-05 0.000138310260052125 4.60068910634264e-05 1.35639315060738e-17 9.68522881605585e-23 0.00395832896815445 0.00230638384149509 0.00164607765646811 0.00061454486163218 0.000194049890830926 9.20418321168898e-05 0.00235925903138071 0.00189134650639306 0.00287416376515236 0.000532694203876721 0.00013293303356023 0.000112500332181525 0.000375825283258556 0.000279410276939133 0.000248821204079403 XM_003586434.2 KIAA0368 PREDICTED: Bos taurus KIAA0368 ortholog (KIAA0368), mRNA. 0.0 1.473e+04 100.00 0.890901156447742 XM_005251854.1 KIAA0368 PREDICTED: Homo sapiens KIAA0368 (KIAA0368), transcript variant X5, 0.0 8592 87.57 0.750490944795985 TCONS_00228906_9 sp|Q5VYK3|ECM29_HUMAN ECM29_HUMAN Proteasome-associated protein ECM29 homolog; 0.0 3573 96.56 0.995652173913044 5 coding 0 0 1 1 -0.147816379064923 0.311779226971079 -0.00775178279168445 0.898902164406324 ATGGATATTGACATCCAAGATGCTCCAGGACTTAGAATGGAGAGGAACACCTCACCTAGGTGGAGCACTGGTCCACAGGCAGCAGTGAGGAACCAGGAGGATGCTGACTGTACCGCCCGACCAGTGGAATGTGAGGTGCGTAAAGTTTAAATCACTGTATTCAAACTCAATTACTCGGGTTACCAAAAAGAACGTAGGGATTACAACAAAAATGTAAGAAAACAGCTCCTTAGTAAGGAAGCCCAGCGAGCAGGGTCGGGGGCCGACCGCCGCGCCGGGGCTCGCCCGGGACTGAGTCAGCGGCAGGGCTGAGAAGTTCGGCGGGAGGCGCAGGGCGGGGCTTCCTCCCGCCGACTCCGAACCCAGCTTTACTTTTCCGAGTCCACGTCTCTTCCTTTGGACGGGATTTCCCCCGGCCGGGGCAGCCCGGGCCAGCTCGGCCAAGCCCCTCACGGACGGCGGCGCCCGGCTCCTCGGGGGCCGAGCTCGCCGCTCGCCTCACTTCTGGGCGCCCGCGTCGCGGCGCCGAGCGCAGCATCCCCGGCATGGAGACCGGCTCGGACTCAGATCAGCTTGAACGAGTCTTTTTACGACTTGGACATGCTGAAACAGATGAGCAGTTACAGAATATCATATCTAAATTCCTTCCTCCTGTTTTGCTCAAGCTGTCCAGCACCCAAGAAGGCGTGCGCAAAAAGGTAATGGAACTGTTGGTCCATCTGAATAAGCGCATAAAAAGCCGCCCCAAGATACAGCTCCCAGTAGAGACACTCTTGGTTCAGTACCAGGACCCTGCTGCAGTCTCCTTTGTCACAAATTTTACTATAATTTATGTTAAGATGGGCTATCCTCGGCTACCGGTGGAGAAACAGTGTGAGCTGGCCCCTACGCTTCTTACTGCCATGGAAGGAAAGCCTCAGCCCCAGCAGGACAGCTTAATGCATCTTTTAATACCAACCCTTTTTCACATGAAATACCCTGTTGAATCATCAAAATCAGCTTCTCCGTTTAATCTTGCTGAGAAACCAAAGACTGTGCAGCTGCTTTTGGACTTCATGCTGGACGTCCTTTTAATGCCTTACGGATATGTGTTAAATGAATCCCAGAGTCGCCAAAATTCATCTTCAGCACAGGGTTCTTCTTCAAATAGTGGGGGAGGTTCTGGAATACCACAGCCTCCCCCAGGAATGAGCTTTTATGCAGCTAAACGAGTTATTGGAGATAACCCATGGACGCCTGAACAGTTGGAACAGTGCAAATTGGGTATAGTGAAATTCATAGAAGCTGAGCAGGTGCCTGAGCTCGAAGCTGTTCTCCACCTGGTGATTGCTTCTAGTGACACACGCCACAGTGTAGCCACCGCAGCAGACCTAGAGTTGAAAAGCAAGCAAAGCTTGATTGACTGGAATAATCCTGCCATCATTAATAAGATGTACAAGGTATACCTTGGAGATATACCACTGAAAACAAAAGAGGGAGCAGTTCTGAAGCCAGAGCTGAAAAGGGACCCAGTCAGCACAAGGGTCAAGTTAAAGATTGTCCCCCACCTTCTTCGTTCTAGACAAGCTGCCGAAACGTTCCCAGCTAACATTCAGGTGGTGTATGATGGACTCTTTGGTACAAATACAAATTCAAAATTAAGAACATTATCCCTGCAATTTGTGCATCACATTTGTGTAACCTGTCCAGAAATCAAGATTAAGCCATTAGGTCCAATGCTTTTGAATGGTCTCACCAAGCTAATCAATGAATATAAAGAAGACCCTAAGCTACTGTCTATGGCATATTCAGCTGTTGGAAAACTCTCCAGTCGAATGCCACATTTATTCACTAAGGATATAGCTCTCGTGCAGCAGCTTTTTGAAGCCCTGTGTAAGGAAGAGCCCGAGACGCGACTCGCTATTCAAGAAGCATTATCCATGATGGTTGGAGCTTACAGTACTTTGGAAGGTGCACAGCGGACTCTCATGGAGGCACTTGTGGCCTCGTATTTAATAAAGCCTGAAGTTCAAGTTCGACAAGTGGCTGTGAAATTTGCCAGCACGGTGTTTCCCTCAGACCATATTCCTTCCAGATACTTGCTCTTGTTAGCTGCAGGAGACCCGCGGGAAGAAGTTCACGGAGAGGCACAACGAGTTTTAAGGTGTCTTCCTGGTAGAAACAGGAAAGACAGTGCTTCTAAGCAGATGCCATCTTTCCCAGAAATGGTATACTATATCCAAGAAAAGGCTTCGCATCGAATGAAAACACCAGCCAAGTACATGACTGGGACCACTGTCCTTCCATTTAACCCAGCAGCCTTTGGAGAGATCGTCCTGTACTTGCGCATGTGCCTGGCTCACAGCGCGGGGGTGGTGCCTACCTCTCAGAGTTTAGCTGATATGCAAGACCACGCCCCAGCCATTGGACACTACATACGGACTTTAATGTCAGGCAGCCAGGCGACACCCTCCTCCTCATCTTCCAAGAGTGGGGAAACCAACCCTGTGCAGATCTACATTGGCCTGCTTCAGCAGCTGTTAGCAGGTGTTGGAGGTTTGCCAGTCATGTACTGTCTATTGGAAGCTGTCTCAGTGTATCCAGAAAAGTTGGCCACCAAATTTGTAGACAAAACTGAATGGATAAAGAGTCTGATGAATAGCAGTAAAGAAGAGATGCGTGAACTGGCAGCCTTGTTTTATTCCGTGGTAGTGTCTACAGTGTCGGGAAATGAGCTGAAGTCAATGATAGAACAGCTGATAAAGACTACGAAGGACAATCATAGCCCGGAGATACAGCACGGATCCTTGCTTGCACTGGGATTCACAGTAGGAAGATATTTGGCTAAGAAGAAAATGAAAATGGCAGAGCAGCCAAACGTGGAGACACATGCTGATTTCCTGCCCGAACAAGAGGAGCTCATTCAGAGTGCCACAGAAACTATTGGCTCATTTTTGGATAGTACCTCCCCTCTCTTGGCGATTGCTGCCTGTACAGCCCTGGGGGAAATTGGCAGAAATGGTCCCCTCCCAGTCCCCAGTGAGGGGTCGGGCTTTACCAAGCTGCATCTTGTGGAAAGCCTGCTAAACAGAATACCCTCCAGTAAAGAAACAAATAAGATGAAAGAAAGAGCTATCCAAACACTGGGGTATTTTCCAGTTGGGGATGGAGATTTTCCTCACCAGAAGCTCCTCTTGCAAGGTCTGATGGATTCTGTGGAGGCCAAGCAAATAGAACTGCAGTTCACCATCGGTGAAGCCATCACCAGTGCCGCGACAGGGACTAGTTCTGTGGCTGCCCGGGATGCCTGGCTGGTGACCGAGGAGGAGTATACACCCCCCGCCGGAGCCAAAGTTAATGATGTGGTCCCCTGGGTGCTGGATGTGATTTTAAATAAACACATCATCAGTCCCAACCCACATGTGAGGCAAGCAGCGTGCATCTGGCTCCTTTCCCTTGTGAGGAAGCTCAGTACCCACAGTGAAGTGAAGTCTCATCTTAAAGAAATCCAGAGTGCATTTGTTTCTGTTCTGTCAGAAAATGATGAACTGAGCCAGGATGTTGCCTCAAAAGGCCTTGGGTTGGTGTATGAATTGGGCAATGAACAAGACCAACAGGAATTGGTTTCCACTCTTGTAGAAACACTGATGACTGGCAAAAGAGCTAAACATGAAGTTTCCGGAGAGACAGTGGTGTTTCAGGGAGGAAGCCTTGGCAAAACCCCTGATGGCCAGGGCCTCTCTACTTATAAGGAGCTCTGTTCTCTGGCAAGTGATCTTAGTCAGCCGGATCTGGTGTATAAATTTATGAATCTAGCCAACCATCATGCGATGTGGAACTCGAGGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCTACCAGAGCTGGAGAACAGCTGGCTCCTTTCCTGCCTCAGCTAGTTCCGCGTCTTTATCGTTACCAGTTTGATCCCAACCTTGGCATTCGACAGGCCATGACAAGTATTTGGAACGCACTGGTCACTGACAAGTCAATGGTGGATAAGTATTTGAAGGAAATTCTTCAAGATTTGGTTAAGAATCTGACCAGCAATATGTGGCGAGTTCGAGAATCCAGCTGCTTAGCTCTGAATGATTTATTAAGAGGAAGACCCCTAGATGACATCATTGATAAACTTCCAGAAATTTGGGAAACCCTCTTTAGAGTACAAGATGATATAAAGGAATCTGTACGAAAAGCAGCAGAACTAGCTCTGAAAACTCTGAGCAAGGTCTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATTGCTGTCCTCCTGCCCTGCCTTCTGGATAAAGGAATGATGAGTCCTGTGACAGAAGTTCGAGCCCTCAGTATCAACACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAGCCACATGCGCCAAAACTCATCCCAGCTCTGCTAGAGTCCCTAAGTGTATTGGAGCCCCAAGTTCTCAATTATTTGAGCCTCCGGGCTACAGACCAAGAAAAGGCTGCAATGGATAGTGCCCGACTCAGTGCTGCCAAATCCTCTCCCATGATGGAAACAATCAACATGTGCCTGCAATATCTTGATGTGTCAGTGCTGGGTGAGCTAGTTCCTAGATTATGTGAACTGATCAGAAGCGGTGTAGGTCTTGGAACCAAGGGAGGCTGTGCCAGTGTCATCGTATCATTGACTACTCAGTGTCCCCAGGACCTCACACCCTACTCAGGTAAACTCATGAGTGCTTTGCTTAGTGGCCTGACTGATCGGAACAGTGTAATTCAGAAATCCTGTGCATTTGCCATGGGCCATTTAGTTCGGACCTCACGGGATAGCAGCACTGAGAAACTCCTGCAGAAGCTCAATGGCTGGTATATGGAGAAAGAAGAACCCATCTACAAGACCTCTTGTGCTCTGACTATTCATGCTATTGGCCGATACAGCCCGGATGTACTGAAGAACCATGCCAAAGAAGTTCTGCCTTTGGCATTCCTAGGCATGCATGAAATTGCTGATGAGGAGAAAGCAGAAAAAGAAGAATGTAACTTATGGACTGAAGTGTGGCAGGAGAATGTCCCTGGTTCCTTTGGCGGCATTCGGTTATACCTGCAGGAGTTGATTACCATTACCCAGAAGGCTTTACAGTCTCAGTCCTGGAAAATGAAAGCGCAGGGTGCAATTGCCATGGCGTCAATCGCAAAGCAAACCAGCTCCCTGGTACCTCCGTATCTGGGAATGATACTGACCGCATTACTACAAGGCCTAGCTGGAAGAACGTGGGCAGGAAAGGAAGAACTTTTGAAAGCCATTGCCTGTGTGGTGACACCTTGCAGTGCAGAGCTGGAGAAGCCTGTGCCCGGTCAGCCCAGCACAAATGAAATCCTGCAGGCTGTTCTGAAGGAGTGTGGCAGAGAGAACCCCAAGTACAAGATGGTAGCAATCAGTTGTGCAGGGGATGTCTTAAAGGCCACCAAAGAAGACAGATTCCAGGAGTTTGCCGACATCGTCATACCTCTCATCAAGAAGAACTCACCTGAAAGCATTGGAGTCCGAACTACCAAAAATGAAGATGAGAATGAGAAGGAAAAGGAGCTCCAGCTGGAATCTCTGCTGGGAGCCTTTGAGAGCCTGGGCAAAGCCTGGCCCCGAAGTGTGGAGACCCAGCGTTGTTATCGTCAGGAGTTGTGCAAACTGATGTGTGAACGGCTGAAACTCAGCACATGGAAAGTGCAGCTGGGAGTCCTACAGGCGATGAATGCCTTTTTTCAGGGATTAATGCTTTTAGAAGAAGAACATGCAGATCCTGAGGCTCTGGCTGAAATTCTCCTTGAAACTTGTAAATCAATCACATATTCTTTAGAAAATAAGACCTACTCATCTGTGAGAACAGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTTGAAGAATCGAAACAGTGGGCAAGTCTGACCCCTGAGTGCAGAGTGGTCCTGATTGAGTCTTTAGGAGCCATGGAGACAGACAGCAGACCTGAGCTGCAGGAGAAAGCATCGTTACTGAAGAAAACACTTGAAAGTCTGCAGTGAATTAGAAGGGGAAGAAAGAAAACAAGTGCCATGTTCACTGGGGTTTGAAACGGTGGTGTTCTTTGAAAAACCAAGTGGGGAAAGTAAAGATTAATCTGTAGCATGCATCATTCCTTGGCTGAAATAAAAAAAAAATGCCTTAAATTTTGTTCCTTATTAGCTTTATTTTACTCGATGTTTTAAAAGTATCTGGACTGGATAAGCTAAATGGAACCTTGGATGATATTTGAGAGGTGGTTGTAGGTGAAACTGACAGAAATAGCTGTTGAAAGAATTAGAGCTGTTATTAAAGGAATAGACAAAGTTACAGCGGGAACCTGCATAAAAATCTTAGAACTGCATCCAAATTTTATAAAGTCCTTTCAGGAAGAGGGGCTGTGTCAATCACTTAGTTTAACCCCCTTCTGTAACCTGAAGAAACAGGCTATGAGATGATGTAGCTTCCGTTCGGAGGCCTGTGCCGAGGCTGGAACCTGCATGTTTGATGACCTACCCAGGACACTTTTCTTTTACACCCTGCTGCCAATCAGTGCTAACCTTGACCTGCCTGAGAAATTCCCAAGATGAGAAGGTACAGCCGTCCTGGCACCAGAACTGAACTGACCCATTATGTAAGCACTCTTGGATTCTTGAAGTTCAGAAGCTGAACATTTGTCTTATCATTTGTTTAGATGGTTGGCTTTTCGAATGGTTATCTACCAACCTTACAGATTGAGAGGGAGGGGAAATTGAGTTTCTATGTGATAATTCTAATCATCCTCCTTTTAAAAGCAGATGAAGGTAGGTTAGGACAGAAGTGTTCATTCTGTGGTGTGTATTTTGCAAAACTCCAACCAACAATGATGTCGTAAGTGCTTTGGTTTATATCATTTATAATCTCAAAACTGTAAAGGCAAATTAAAATTTTCTACCCACTTTTATGCTAACAATATGACTGTGAGACAGAAAGAGAAGCATTTTAATTAGCCATCTGGGAATAACATGATATCATTCAAAGTAAGTAATTGCAGCTAGGGATTCTTTCTTTCCTTGTACTGCTCATACTCCTGCCCAGGGATGTCAGGTAAGGGGGAAAGAAGTTTAAATAAGTGTCTATCAAGGTGAATGGAGAACCCTCTAGCTCACCTTGGATTCCAAGCACAAAATTGACTTTCACTCAATTCTGACCCCTTACTGATGTTAACAGCAGGGTGGAAATTCCATGTTGTTATTTTTGGGGGCCTCTGTTAACCGAAGTGGAGCTTCCCAGGTGGCACTTATGGTAAAGAATCCATCTGCCAATGCAGGAGATGCTAAAGACATGTGTTCGATCCCTGGGCTGGGAAGATCCCCTGGAGTAGGAAATGAATTTTCTTGACTGTGACCCATAGTCAAAGTAACTTTTTACATCATGACCCAGAACTCTGTGTGTTTGTATGTGTGTGTGTGAGACAGAGACAGAGGATGAATAGAAAATCTTTAACTTAAATAAAATGTTTTGTGAAATGATATACTCTTAAGTGTGATCTGCTTTGATCCCTCCCCACCAGCTCCCCACCCCATTCTCAATGCCTTTCAGACCCACTGAATTCATTTCTGACTCATAAGTGGGTTGTTATAGTTTGAAAAACACTGCCCTAGATAGTACCTAAGCCTAGCTGTATATGCTATGTTTGGGGGTTGCTTCTGACTGGAAAAGGACTTTACAAATGAAAATTTAAGTGTTTATTACCAAAATATCCTCCTAGCTGATACTAAATATAATTGTGAGTTTTGGCAGCATCATGAATTTTAAGTAAACTATCATGGATTTCCACTTGAGAGTGGTGTGTGTTTGGGGAAGAAAAAATCAACCCCATTTTTTAGAAAGCTTATGTCCTCACAGGACTTGGTGTTTTTCAGATCAGTATTTCCCCTTCCACTAAGTGCCCTCTGACTTTAGTTTTCAGTACCTGGGATACTCTTCCTAGGCAAGAATGCGGTATAGATCAGGTATTAGCAGAAAGGAAGAGTGTAAGGGCAAGAGTTGTGCTCTTGGCTCATATCAAGTTTAAAACCTCATCAGATTTTATGCTTTTTAAACTTTTTGTTACTCAATAATGGGAATGTCCCATGGTGCTGAGAGAGGTGCTAAGATACTTGAACCTTAGTGCTTAGTGCTAGTGAATTAATTTGTTTTAGTTTTCTAAGCACGTTTCTAAGTTCTACACTTACTGCCTTCATCTTGACCAGCCAAGTCATTTGCACAGCTAGTAACGTTATTCATGGTCTCCCGATGCAGCTTGTGTTGGTGTGCATATGCACACGTACATGTATTTAAAAGAGTTAATAAGTGAGAGTTTGTAATTGTGGAATGGTGATACTGGTGAACAAATGGCAAAAGGACCTGTGAACGTCTGTATCTTTGGCCTTCTCTTTCCAAAGCTATCTGAAACAGATCTTTATTATTTTTTCCCTAGGAACATTCAGTGCTACTCATGACATAAGCAACTGATTTAGAGGGTCTACTGAATTGCTTATTCCTGGAATACATATCGTCACAAATTTAACTGATAATGTGAACAGAAGGTACCTGAAATTTGGCAATTGGAAATCAAAGTATAAAACTGTCTTTTTGGTGATAAAGAGCAGCCACTTCTGTAATGTCTGTGTCAGATTTACAATCACCAGTGTGTCTGCCTGGAATACAGCGTACCCGCACGGCAACACCCGAGCGCCACAAATCCCCATTGCTTTGCCCTCCCATCTCTTCACTTGTGTATTCACTGATGAGAAAAGCAAAGGAAACAAGATGTGACTCTGTCGGTCTGTGCTCTAGTTGCAGTCGCACTGTGTGAACACTGTCTGCCCACCGGGGGAAGTCCTATCTGCTGCTGCCACAATATAGTCATGCTGCTTGTGAAGTGCAGGGAGTTGTTTTGACACTGGCACCCACTGTAATGTACAAACTGTTGTTAATGGATGTATATGTAACAGATTTTTGTATTTTATATGCAAAGTCTTCATAGAATCCTCTGCAATATGTACTGAGCTAGCAAAGCATGTGATAGTCTTGAAAGGAAAATCCTTCTGATGCCCAAGGAGATACTAAGTGGTAAATAAAAGCTGCATGATCAGTT EMBV3_21087 TCGTCTGCAGCCAATCCAGAAGGAAATAATGCAGAAGCAAAACCCCACAGCGGGAGACAC Gene GeneID:100337496|LOC100337496:XM_002689539:202_cdna Constitutive 0 NULL GeneID:100337496 8 GENE LOC100337496 NULL interferon beta-like EMBV3_07039 TGCGGCAGGAGTGAGGTATTGGGCTTGGGATTTGGCGTACAAGACCAGTTGGGATATACT Gene BVV0102_414511 + 1 EMBV3_02116 GK000021.2:34614704-34626180 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123819 1 XLOC_075371 NonCoding TCONS_00123819 XLOC_075371 NonCoding NonCoding - 21:34617776-34618006 - TSS92578 230 1 0 0 0 0 0 0 0 0 0 6.86099552042704e-05 0 0 0 2.49502764146947e-05 0 0.000469288671275322 0 0 5.45453246660884e-05 0.000467668972057646 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.00914909267838157 0.954605808160176 0.0309557530892467 0.639623913941087 ATGTGAAAGACCAGATCTGGGGGGCAGGCAGGATGTGAGTGGGTAGAGGGTGGTGCGGCAGGAGTGAGGTATTGGGCTTGGGATTTGGCGTACAAGACCAGTTGGGATATACTGAGCTGGAGGGGCCATGAGACACCAGTTGGGGGTGTCTGGGAGACAGCTGGAGGTTTCTAGGCTGGAGATAATGATCAGGAAGTTTTAAATTGAATAGGCCTGTGTCAAGAGAGAAG TCONS_00119280 TCONS_00119281 TCONS_00119283 . 3' 3073 TCONS_00119280 TCONS_00119281 TCONS_00119283 . 3' 3302 EMBV3_13734 TTCTTCCCCAGTGAGGAGCAGCGTCTGTGAGGTGCAGCCAAACGGGGACAAAGTGAACAA Gene BVV0102_114065 + 0 NULL GK000029.2:49848639-49878710 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165708 1 XLOC_100599 Coding TCONS_00165708 XLOC_100599 Coding Coding TSPAN32 29:49877416-49926024 = TSS123722 1842 1 TCONS_00165708_2 269 0.0857763300760043 8 0.962268809019277 0 2.72759761559119e-05 0 0 0 0 0 0 8.56691466746841e-06 0 0 0 0 0 3.0186509956361e-06 0.00121877413289516 0 0.000231566452460743 0 0 0 0.000112800634932842 5.47853809178475e-05 0.000354952742390387 0 0 9.54258824320409e-06 0 0 0 NM_001242955.1 TSPAN32 Bos taurus tetraspanin 32 (TSPAN32), mRNA. 0.0 3323 100.00 0.999457111834962 XM_005252719.1 TSPAN32 PREDICTED: Homo sapiens tetraspanin 32 (TSPAN32), transcript 6e-96 356 76.63 0.257328990228013 TCONS_00165708_2 sp|Q96QS1|TSN32_HUMAN TSN32_HUMAN Tetraspanin-32; 2e-80 249 48.79 0.936802973977695 1 coding 0 0 0 0 -0.0243461508974453 0.832507187457171 0.0180876392396516 0.698340207262526 AGAGGAGAGCAGACGGACCTCCATGGAGCCTTGCAGTCGAGTCAGGGTGGCCAAATGCCAGATGCTGGCCACCAGCCTCTTTGTTCTGCTCCTGGGCTCCGCCATGGCCGCCACAGCCGCGCTCAGCTACTTTGGGCCCCACTTCACTGTCATCGGCCCCGTGTCCGCAGACAGGACCACCTATGAGGCCTTGCACCACTGGGCCTTCTCCGCTGGAATTGCCCTGGCTGCACTCCTGACCCTGGGGGCCATGCTGAGCGCCGCAGCCACTGTGAGAGGGGCCGGGGGCCTCATGGCTGCGGCCTTCCTGAGCTTTGCCCTGGTGTTCTGCGCCCTCGTACAGGCGGCCTTCTGGAGGGCCCACAGCCCCACTCAGATGGAGGACGCCGTGCTGGATGCCTATGACCGGGCCTATGAGCGGGCGCTGAGGAGCGCATCCGGAAGCGGGCGGCAGGAGCTGGTGGCCATCCAGGACACGGACTGCCTGCGGGGGATCCAGAGCTTCCTGAGGGTGCACGGGAACATCGTCTCCACCCTGATCGGCCTGGGCCTCGCCTTCACGGTGTACGCAATGCTGCTTAGCTCCTTCATCTGGTTCACCATCCGCTTGGGCAGATACCCCGTGAGCCAACGGGCCCGCGACCACCCTCCCCAGGAACCCAGAGTCTACAGATGCATCCGGGAGGGATCCCCGTCTCCACGCCCGTCCAAAGCAGATGCTCCTGGGGGCCGTCTGAGTCCAAGCAGACGCTCGGGTCAGCTTCTGCTGCTCCAGGACACCCACCCGCCTACCCACGGGAGCGGAGAAGCTACGGTCTCGACTCGCATGTGACCCTCGTGGGAGGGGAGGAGCTGTTTCCCTCCACGTGGTGGGGGGTCAGGGAAGAGGAGGCTTGACCAGACCAGCACCTCCATTGAAGCAGACGGGGGTTGGGGGAGCAGGGGTCAACTGCAGACTCTGGGGAGAGGCTGGGGGGTGAGAGTGCGGGCAGAGGGAATAGAGGGTGGGTTTGGCAGGGCTCCCTGGCCCCCCACTCCCAGGCTCTGGGGAGAAGGGAGGACCCACTGCAGGCTCAAGCAGACTGGAGGCAGTTCAGTTCTGCGCAGCGTCAGGACTGAGGCCCCACCCGTGTCGGCTGTCCACGGGCTGCTCGGCTCCGGAGACCACTTCCCCTCCTCACACGGCCCCCCATCCTCACATCGCAGGCAGGAGGGCTCCTGCTCCCCTCTGACCCTCCAAGCAGGACTATCTGCAGGCCCAGGTGACTAGGTGAGGGCCACCCGGGTGACTTCCCTGTTGTAAGGAGAAATCACTCGTGTAGTGATACTGCGTGTACAGTCCCGGGGGTGCGTCTGAGAAATCCTGCCTGCTGCCGCCCCCGTGTCCGCCATCCGACCACGTGACGACTGGCATCCTCGGCTCAAGCCCCAGAGTCCTGGGCGGGACACCGGACTGGCCCAGCCCAGCTTGGGGGCCCCGTCGTAGCTGCCAAAGGAGAAGGAAACACGGCCCGTGGAGCTTCCACCAAGCGGGTGCGGCCCCGCCCCACCGAAACCGGCAGAGTCTGCTTCTTCCCCAGTGAGGAGCAGCGTCTGTGAGGTGCAGCCAAACGGGGACAAAGTGAACAACGCCCGCTGCCCGCAGTCACACTCAGGCCGTAGTACACCTCCCAGAACAAGCAGCTCCCCAGGGACAGACGAGCAGCCTTGTGCCGGAAGCTCGTGGGCAGAAGTCTCGCGGTTCTGCGGTTCTGGGTTTGGTAACCGTCCAGGGCCTCTTGGGAGGTGTGTTCCTCTCCCAGTCTGTTCTTCTCATCTTACAAAATAAACTTTAAGGAAGGC EMBV3_02999 AAGGAGCGGGAAAGGTGTGTCGAGGGTGGGAATGTCATGGGTGATGGCTAGAACCAAAAA Gene GeneID:538021|DAGLB:NM_001083487:263_cdna UTR3_Alt 2 NULL GeneID:538021 25 GENE DAGLB MGC143054 diacylglycerol lipase, beta EMBV3_12322 AATGGTTTTGATATATGGATGACATCAGAGGGGCACGTGGCGTATGTATTAACTCAGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11560 GGCTGAAGTTCCTGCTGTAAAGGACATGTTGGAAGCTGGTGTTCTAGATACTTACCTGGG Gene GeneID:281047|CCT8:NM_001033609:2_cdna Constitutive 0 NULL GeneID:281047 1 GENE CCT8 MGC126936 chaperonin containing TCP1, subunit 8 (theta) EMBV3_24116 CAATCTATGGCATACTTATGTAGCTCACTTAATATATATGGAGAAGGAAGGTCTTTCTTC Gene GeneID:506654|RGS13:NM_001080232:5_cdna Constitutive 1 NULL GeneID:506654 16 GENE RGS13 MGC152086 regulator of G-protein signaling 13 EMBV3_43029 CACAGTCAGGAATAGCCCTCTGTTTGCCTTGGCTGGTGGGGAAGAGATTACTGCTCACTT Gene BVT0102_105116 + 1 EMBV3_13332 GK000019.2:18609332-18811261 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095460 TCONS_00095459 TCONS_00095461 TCONS_00095462 1 XLOC_057717 NonCoding TCONS_00095459 XLOC_057717 NonCoding NonCoding - 19:18804478-18807122 - TSS71159 1367 3 TCONS_00095459_1 104 0.0592538405267008 4 0.48429814604616 0 0 0 0 0 0 0 0 0 3.0228159436064e-22 7.23519200029179e-47 1.70695806917634e-15 0 0 0 0.00114394070217974 0 1.31506738772636e-06 0 0 0 5.49923921241388e-27 2.03007700166397e-14 1.73237420434743e-09 0 0 0 2.02588908784275e-29 3.09895205192468e-08 2.42795809916897e-05 XM_005195590.1 LOC101902881 PREDICTED: Bos taurus uncharacterized LOC101902881 (LOC101902881), 0.0 1407 100.00 0.569861009509876 0 noncoding 0 0 0 0 -0.0102756349003008 0.92216131947663 -0.0210120264718154 0.714239757551596 TTCTATCCCTGACAAGGGATCAAACCTGGGCTCCCTACTTTGGGAACCCAGAGTCATAGCCACTTCACTACCAGGGAAGGCCCACCGCGTTCCTTTAATAGCCATAATAGAACGCTCTAGCCATATTCTGAACGCACAAGTTGTGGTTCCTTCTCCCCTCCCCAGATACTTCACTGGGGAACCTGGGGAGGTGTCAGCGTGGAGAGCGTGTTCATTTCATGCCAGCTGTGCTGTGCTGCTCAGGAAGCGAGTGTAGGTCTTCAGGCATTGCATAGTGTCTTCTGTTTGTGATCTCTACAAAGATGACCTTTCCTGCAATCTCCTCTCTGGCCCTCCTGCCCTGGCCAGACCCTGTTAGGATGGTGGTTCTGAACCGAGAAGCTGGCCCCTTTGCGCCTCTTGTCTGGCCCTCGAGGCCCAGGGAGGCATCCTCCCCCTCATTGGGGTTCATCCTACAAGTCCAGATGCCGTCAGCTCCAGGGCCTCCCTCTGGGCCAGAGCTCGTCCCTCCCCACCAGCCTCCTTGGGGTGCAGATGGACGGCCCAGCACAGTCAGGAATAGCCCTCTGTTTGCCTTGGCTGGTGGGGAAGAGATTACTGCTCACTTTCTGTTTTGACTCTTATATTTAGCTAACACACAGAGCCTGTGAGATCGCAGAAAAGCAGCCTTGGGTCTTGAATGAGTCTGGGGCCCGTCCCTGATGGCCTGGCGCCTGTTGAGTGGAGGTGTCTGAAGTAGGCATGAGTGATAACACTGCCTTCTGGGTACATGGAGAGAGGACGAAGCCAACAAAAAGGAAAGAAGCAAGAAGTGGGAAAAGTATGCTGTCCAGATACCAGCCCCTGGAGGTTGAGGAGAGCATTTCCTCGATGCTCAGATTATGGATCAACCTGGGTCATTTCTCCTGGTCCAACTGTGCTGAAGCCAGATGCACCTCAGTTTTGTGGTTCAATACAGCCTTCTCTTCGTTTGAGCCAGCTCACCACAGAAGAGAGTCCTGGCTGATGCAGCTTATCCACCGCACCCTTCAGTAAGCTCCGCCCAAGAACCTCCAGGCAAAACCAACTAATGAAACTTCCATGGCCACGCAGACTCTTCAGAGCTGGTTTTGGCGGAACACCTGAGTATACCATCTCCCCAGACTGCCGGCATTCCGATTAAAAGGAACTTTGCTTTCTATCAACAACTGCTTCTTGGGTGTTGATTTCCAAGCAGCTGGACTGAGTTTGGAAACAGCAGATGAGACAGGAGGATAAATTCCTTCATCCTCCATCCCTTGGACCACTTGAGGCACATTTTCCAGATGGGGTTTGTTGTACAGTGGTTACACGTCACCTTGCTTTGCTTCCTGTTCTCCCCGACCTCC TCONS_00095463 s 3' 6489 TCONS_00095463 s 3' 4140 EMBV3_36801 GACTCACTGTCAAGAGAGGGGAGCCAAACTCATGGCCAGCTCATTCCATCTCAGACATTT Gene BVV0102_036164 - 1 EMBV3_26961 GK000007.2:52513061-52669810 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13191 GAAATAGCTGTCCCAGACCTTTCACCCTCGGAAACTCAGAATGTTATCCATCCCCACCTC Gene GeneID:506293|LOC506293:XR_083690:51_cdna Constitutive 0 NULL GeneID:506293 5 PSEUDO LOC506293 NULL similar to helicase EMBV3_42431 CACTATGGCCAGGAATTTGCCTTCTGGATTGCTTCTGGGATCTGCTACAACAGCAGAACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00743 GGGATACTGCAAGTGAGACCAGTCTTTGTGTTCAGTCCCTCCTGCCCAACTGCTCATCTT Gene BVV0102_269828 + 0 NULL GK000016.2:52881300-52882370 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069570 TCONS_00069568 TCONS_00069569 TCONS_00069571 1 XLOC_042003 Coding TCONS_00069568 XLOC_042003 Coding Coding SPEN 16:52881552-52903974 j TSS51847 11418 1 TCONS_00069568_15 3157 10 0.491191293876277 0.00026337372206116 1.99131369566741e-05 0.000277131515724423 3.90589060461304e-09 2.85239724130957e-50 5.1730082390978e-05 1.05129135350677e-23 2.71829764874473e-69 5.22003767461789e-25 6.41682604790082e-05 5.25054804940324e-12 0.000147922599292581 2.32566930694966e-15 4.23543656190018e-55 2.21544550382353e-95 0.0011949381135032 0.000712511363057802 0.00331677689711955 3.78306142711513e-12 0.000231184667710442 0.000127496980774629 0.000333958884220655 2.44004832269486e-07 0.000203399578654622 3.83508188200111e-21 9.30095359137004e-17 7.48198476780901e-31 3.66241160155036e-05 0.000121170682019834 2.09856206230457e-21 XM_002694139.2 SPEN PREDICTED: Bos taurus spen homolog, transcriptional regulator (Drosophila) (SPEN), mRNA. 0.0 1.907e+04 100.00 0.925906463478718 XM_005245784.1 SPEN PREDICTED: Homo sapiens spen homolog, transcriptional regulator (Drosophila) (SPEN), transcript variant X1, mRNA. 0.0 1.222e+04 85.41 0.925906463478718 TCONS_00069568_15 sp|Q96T58|MINT_HUMAN MINT_HUMAN Msx2-interacting protein; 0.0 5194 85.69 0.999683243585683 0 coding 0 0 0 0 0.444893071377315 0.532586302003998 0.00604316410711991 0.895254756420321 GTTTCTCTGGACCATTTTCATGTGATATTGATATTAAGAAAGTAAACGGAGTCCCTCAGTATGCGTTCTTGCAATACTGTGACATTGCCAGCGTTTGTAAGGCTATTAAGAAGATGGATGGGGAATACCTTGGAAATAATCGTCTCAAGCTGGGTTTTGGAAAGAGCATGCCTACAAACTGTGTGTGGTTAGACGGGCTTTCTTCAAATGTGTCAGATCAATATTTAACACGACATTTTTGCCGATATGGGCCTGTGGTAAAGGTGGTGTTTGATCGCTTAAAAGGCATGGCCCTGGTTCTTTACAATGAAATTGAATATGCACAAGCAGCTGTAAAAGAGACCAAGGGGAGGAAAATCGGTGGAAATAAAATAAAGGTGGATTTTGCAAATCGAGAAAGTCAGCTGGCATTTTATCACTGTATGGAAAAATCTGGTCAAGATATTAGAGACTTTTATGAAATGTTATTGGAAAGAAGAGAAGAACGAAGGGGATCTTATGACTATAGCCAAGATCGTACATATTATGAGAATGTCCGTACTCCAGGCACATATCCTGAGGATTCCAGACGGGACTATCCAGCTCGAGGGAGAGAATTTTATTCAGAATGGGAAACTTATCAAGGAGACTACTATGAATCACGATATTATGATGATCCCCGGGAATATAGGGATTATAGAAATGATCTTTATGAACAAGATATTCGGGAATACAGTTACAGACAAAGGGAACGAGAAAGAGAACGTGAAAGATTTGAATCTGACCGGGACAGAGACCACGAGAGGAGACCAATTGAACGCAGTCAGAGTCCAGTGCACTTGCGACGCCCTCAGAGCCCTGGAACATCTCCCTCACAGTCCGAGAGACTGCCGAGTGATTCCGAGAGGAGGGTTTACAGCCGCTCCTCAGACCGGAGTGGAAGCTGCAGCTCACTTTCCCCTCCAAGATACGATAAACTTGACAAACCTCGTTTGGAACGCTATACAAAAAATGAGAAGACAGATAAAGAACGAGCTTTCGATCCTGAGAGAGTGGAAAGAGAGAGACGTTTAATAAGGAAGGAAAAGGTGGAGAAGGACAAAACTGACAAGCAGAAACGAAAAGGAAAAGTTCATTCCCCAAGTTCTCAGTCTTCGGAAACAGACCAAGAAAATGAGAGAGAGCAAAGCCCCGAAAAGTTGAGGAGTTCTAATAAACTGAGCAGAGAGAAAGCTGACAAAGAAGGATTGGCCAAAAACCGCTTAGAACTCATGCCCTGTGTGGTTTTGACTCGAGTGAAAGAAAAAGAGGGGAAGGTTATTGACCACGCCCCTTTGGAAAAGCTGAAAACCAAGCTTGATAATGACGCTGTCAAGTCTTCTGCCTTAGATCAGAAACTTCAGACCTCTCAGACAGAGCCTGCAAAATCTGAATTGTCTAAACTGGAATCTGTTAGGATGAAAGTGCCAAAGGAAAGGGGGCTTTCAAGCCACATAGAAGTGGTAGATAAGGAAGGCCGGCCTAAACCCAGGAAGCACTTAAAACCAGAGCAGAGTGCTGACGGGGTGAGTGCTGGGGACCTGGAGAAGCTGGAGGCAAGGAAAAGGCGTTTTGCAGATTCCAATTTGAAAGTAGAAAGGCAGAAATCAGACCTCAAGAAAAGTAGTCCAGAGATGGAAGATGCTCGGGTGCTTTTAAAGAAACAGCCTGACATGTCATCTAGAGATGTCATTCTGCTGAGGGAAGGAGAGTCTGAAAAAAAGCCTGTGAGGAAAGAAATTCTTAAAAGAGAATCTAAAAAACTTAAACTGGACAGACTTAATGTTGTTCCCAGCCCCAAAGACTGTCAGGAGCTTACCAGTATTTCTGTTGGGACTGGCTCAAGGCCCAACTCAGATCTGCAAGCAAGGCTGAGAGAACCAGTAGGTGAATCTGTGGAAAATCAAGAAATCCAGTCAAAAAAACCCACTGCCTCAAAACCACAACTCAAACAGCTGGAGCTATTAGATGATCAAGGACCAGAGAGAGAAGATAATAGGAAAAACTATTGCAGTCTTCGTGATGAACCACTTGAATGTAAATCGGGCCAAGAGAAACCACATTCAGTAAATACTGAAGAAAAAATTGGCATTGATATTGATCACACACAGAGTTACCGAAAACAAATGGAGCAGAGTCGTAGAAAACAGCAGATGGAGATGGAAATAGCCAAGTCTGAGAAATTCGGCAGTCCTAAAAAAGATGTGGATGAATACGAAAGACGTAGCCTTGTTCACGAGGTAGGCAAACCCCCTCAGGATGTCACCGATGACTCTCCTCCCAGCAAAAAGAAAAGAATGGACCATGTTGATTTTGACATCTGCACCAAGAGAGAAAGGAACTACAGAAGTTCACGCCAGATCAGTGAAGATTCTGAAAGGACTGGTGGTTCTCCCAGTGTTCGGCTTGGTTCCTTCCATGATGATGATGACCCTATTGGTTCTCCTAGGGTAATGTCCATAAGAGGGTCTCCTAAATTAGATGACAAAGGTCTCCCCTATTCTCATATAACAGTCAGAGAAGAGTCCTTAAAATTTAATCCTTATGATTCAAGCAGGAGAGAACAGATGGCAGACATGGCTAAAATCAAACTATCTGTTTTGAATCCTGAAGATGAACTAAATCGGTGGGATTCTCAAATGAAACACGATGCCAGCAGATTTGATGTGAGTTTCCCCAACAGCATAATTAAGAGAGACAGCCTTCGAAAGAGGTCTGTCCGTGACTTGGAACCTGGTGAGGTGCCTTCTGATTCTGATGATGATGGTGAACACAAATCTCACTCACCTAGAGCCTCTGCATTATTTGAAAGTTCTCGGTTGTCTTTTTTATTGAGGGACAGAGAAGACAAACTACGTGAGAGAGATGAAAGACTCTCCAGTTCTTTAGAAAGGAACAAATTTTATTCCTTTGCATTGGATAAGACAATCACACCGGACACTAAGGCTTTGCTTGAAAGAGCCAAATCCCTTTCTTCCTCTCGAGAAGAAAATTGGTCTTTTCTTGACTGGGACTCCCGATTTGCTAATTTTCGAAACAACAAAGATAAAGAAAAGGTAGACTCTGCTCCGAGACCTATTCCATCCTGGTACATGAAAAAGAAGAAAATCCGGACTGATTCAGAGGGAAAAATGGATGATAAGAAAGATGACCATAAAGAAGAGGAACAGGAAAGGCAAGAATTATTTGCTTCTCGTTTTTTACACAGCTCAATCTTTGAACAAGATTCCAAGCGACTGCAGCATCTAGAGAGGAAAGATGAAGAATCTGACTTCATTTCCGGCAGGTTGTATGGGAGGCAGACCTCTGATGGACTGAATAACACAACTGACTTGATTCAAGAGCCAGTAGTTCTTTTCCATAGCAAATTCATGGAACTCACACGAATGCAACAGAAAGAAAAAGAAAAAGACCAGAAACCCAAAGAGGTTGAGAAACAGGAAGATACAGAGGATCATCCCAAGACCCCAGAATCTGCTTCTGAGAATAAAGAGCCGGAACTGAAAACTCCATCTTCAGTTGGGCCCCCTAGTGTCACTGCTATAGCTCCGGAGTCAGCAGCAGCATCGCTGGAGAAGACAGCTGGTGAAAAGACTGGAGAGGGGCCTCCGGTGCCAGAAGAAAAGACCATTGAGCCAGCCTCTGTCCCGGAAGAGGCAAAATCCACAAGTACAGATCTGGCTCCTGTCACTGTGGAGCAGCCTGAGCAAGGAGACTTGCCCCCAGGAGTGGACACCAGGAAAGACACTGCCGAGCCTCCTTCCACTGTTGAAAGAGGCTCATCAGTCGATCAGCTGCCTTATCTGGATGCCAAGCCTCCAACTCCTGGGGCCTCGTTTTCCCAGGTAGAGATCAGTGTAGATCCTGAGCCTAACAGCACCCAGACACTTCCAAAACCAACTCAGAAGCCTGAAGAAGCCGATGAGCCTCAGGTGGAAAAGCCAGACTTGGCTGCTAACGTTGAACCTAACACAAGTCAAAAAACGGAGGATGTTCCTGAGGTTCCACCTCCAGCTACTGAAGTTGTAGAGGTTGATCCTCCAGTTGCTGCAAAAGATAAAAAGCCAAACAAAAGTAAACGTTCCAAGACCCCCATTCAGGCAGCTGCAGCAAGTGTGGAAAAGCCCGTCACCAGGAAGAGTGAGAGGATAGACCGGGAAAAGCTCAAGCGATCCAATTCTCCCCGGGGAGAAGCACAGAAGCTTTTAGAACTGAAGATGGAGGCAGAGAAGATTACAAGGACTGCTTCTAAAAACTCAGCCACGGACCCTGAACACCCCGAGCCAAGCTTGCCACTTGGCCGAACCAGGCGCCGGAATGTGAGGAGTGTTTACGCAACCATGGGCGACCATGACAACCGCTCTCCAGTCAAGGAGCCCGTGGAGCAGCCCCGAGTGACCAGGAAGAGACTGGAGCGGGAGCTGCAGGAGGCTGCGGCGGTTCCCACGACCCCTCGGAGGGGGAGGCCTCCAAAGACTCGCCGTCGGGCCGATGAAGATGACGAGACTGAGGCCAAAGAAGCTGAGACGGTCAAACCAGCTGAGGGCTGGAGATCCCCACGGTCCCAGAAAGTAGCTGCTGGTGGTCAGCAAGGGAAGAGGGGGAGAAACGAACCCAAAGTTGACCCTGAACGTCCTGAGGCGACCACTGAGGGGAGTCCTCAAGTGAACGTGAGGGAAAATAATACAAAATCCAAGGCTGATAAAGAAGCAGCAGCGAGTGAACAAAAACGTGACAAGAAAGAAATTAGCACGGACAGAAATCCACCCGAAACCCCCCCAGTTGAAGTAGTGGAGAAGAAAGCAGCCCCTGAGAAAAACTCCAAGTCAAAGAGAGGACGATCTCGAAACTCTAGGTCAGCAGTGGACAAATCTGCAAACGTGAAAAATGCGGAAGCCACCATAAGTCCCAGTGTGGCTGCAGGCCCTTCAGAACTGCCGGTGGAGGAGGAGGCTGGGGTCGTGGCTGTTTCCCCCGAGAAGAGCAAGAGTCCCCAGAAGGAGGGGAGTGTATCATCACAGTTGAACAGTGAGCCCGCTGAACCGGACAAGGAACCAGAGAAGGAGGATGTGTCTGCCTCCAAGCAGTCCCCAGAAGCAAATCAGTTAGCCCGGCAGATGGAGCTGGAGCAGGCCGTGGAGAACATCGAGAAGCTCACGGAAACCTCCACACCCGCAGCTTTCAAGGCGGCAGCTCCTGATGCCACAGAGGGCCTCTCTACAGAGGACAGGGACAAGCCCGCACACCAAGCCAGTGAAACAGAGCTGGCCGCGGCCATCGGGTCCATCATCAATGACATTTCTGGGGAGCCAGAAAACTTCCCCGCACCGCCACCTTACCCTGCAGAATCTCAGACAGATCCGCCACCTCCTGAGGAAGGCATGGAGCCTGAGACCAATGAGGCTGTGTCTGGCATCTTGGAGACAGAGGCTGCTGCTGAATCTTCTAGGCCACCAGGCAGTGCACCTGACCCCTCAGCAGGCCCAGCAGACAAGAAGGAAGCCCGAGGAGACAGCAGCGAAACCTCCCACCCAGTGCCGGGAGCCAAGGGGTCAAAAGAAGAAGTGACTCTGGTTCGGAAAGATAAAGGGCGCCAGAAGACTACTCGATCACGCCGCAAACGAAATACAAACAAGAAAATAGGGGGCACTACAGAGACCCATGTCCCTGAACCTGACCAGGTTCAAAGCAAGAGCCCTGCTTCAAGTGATGGGACGACGGTACAACCCCCAGAAGCTCCACAGGAAGAAAAGCAGAATGACAAGCCCCAGTCCACTGCTCCCGAGTCATGTGCTTCTGACCCAAGCAAGACTCCATCCCGAGAGGATCTGCCCCAAGAAAGCAGCATGGACGAAGAGACTCCGACCAAAGCACCTGCGCTCCCAGACCCCACTCCTCTCTCGCAGCCTGCCCCTGTGCATGATGAGCCTCAAGCCAGATTCAAGGTGCACTCCATCATTGAAAGTGACCCAGTGACCCCGCCCAGTGACTCAAGCATGCCCACCCCCCCAATTCCCTCCGTAACGATAGCAAAGCTCCCACTCCCTGTCGTTGCTGGGGGGATCCCACACCAGAGTCCCCCTGCGAAGGTGACAGAGTGGATCACGAGACAGGAGGAGCCACAGGCGCAGTCCACCCCATCTCCGGCTCTGCCCCCAGACACCAAGGCCTCTGACATTGACACTAGCTCCAGTACACTGAGGAAGATCCTCATGGACCCCAAATATGTATCTGCTACGGGTGTCACTTCCACGAGTGTCACAGCTGCCATTGCAGAGCCTGTCAGCGCTGCTCCTTGCCTGCATGAGGCACTGCCCCCTCCAGCTGAATCTAAAAAACCTGTTTTAGAAGAAAAAACAGCAACTCCAGTAACTAACACCTCGGACACACAGGCCTCAGAGGTTCCAGTAGCTGCTGACAAAGAAAAGGTGACTCCAGTCATTGCTCCCAAAATTACTTCTGTCATTAGCCGGATGCCTGTCAGCATTGATTTGGAGAATTCGCAGAAGATAACTCTGGCGAAACCTGCTCCTCAGACCCTGACGGGCCTGGTGAGCGCCCTGACTGGCCTGGTGAATGTCTCCTTGGTCCCCGTGAATGCACTGGCTGGCCCTGTGAATGCCCTGAAAGGCCCTGTGAAGGGCTCAGTGGCCACACTGAAAGGCTTGGTGAACACTCCCGCTGGCCCCGTGAACGTCCTGAAGGGACCAGTCAACGTCCTGACGGGGCCCGTGAACGTTCTCACCACTCCAGTGAACGCCGCCACCAGTGTGGTGAACGCCGCCACGGGCACAGTGAACGCCTCTCCGGGCACAGTGAACGCCGCCGCGGGTGCAGTGACGGTCACGGCGGGTGCAGTGACCGCTGCCTCTGGGGGTGTGACAGCCACAACAACGGGTGCCGTGACGGTGGCAGGTGCAGTGATTGCACCGTCAGCAAAGTGCAAACAGAGATCCAGCAGCAGTGACAACAGTCGGTTCCACCCGGGGTCTATGTCTGTGATTGATGATCGCCCAGCAGACACGGGCTCCGGTGCTGGGCTGCGCGTGAACACTTCCGAAGGGGTTGTGCTCCTGAGCTATTCGGGGCAGAAGACTGAAGGGCCCCAGCGGATCAGCGCCAAGATTAGCCAGATCCCCCCAGCAAGTGCGATGGACATTGAATTTCAACAGTCGGTGTCCAAGTCTCAGGTCAAACCTGATTCTGTCACATCGTCTCAGCCTCCAGCCAAAGGCCCTCAGACTCCTTCAGGCTATGCAAACGTGGCCACCCATTCTACCCTGGTACTGACTGCACAGACATACAACGCATCTCCTGTGATTTCGTCGGTGAAGGCCGACCGTCCATCCTTGGAGAAGCCCGAGCCCATTCACTTGTCTGTGTCCACACCCGTCACCCAGGGTGGCACAGTGAAGGTCCTCACCCAGGGCATAAACACACCTCCGGTGCTGGTTCACAACCAGCTAGTCCTCACCCCAAGCATAGTCACCACTAACAAAAAGCTTGCTGACCCCGTCACCCTCAAAATAGAGACCAAGGTCCTTCAGCCGGCGAACCTGGGCTCCACTCTTACTCCCCACCACCCTCCGGCTCTGCCCAGCAAACTGTCAGCAGAAGTGAACCACGTCACGTCGGGGCCCAGCACCCCAACAGATCGAACGGTGTCCCATCTGGCAGCCAGCAAGCCAGATGCGCATTCCCCTCGACCCAGTGGGCCCGCTCCAAGCCCGTTCCCACGGGCATGCCACCCCAGCAGCACCACATCCGCTGCACTGTCCACGAACGCCACGGTCATGCTGGCAGCAGGCATTCCTGTGCCCCAGTTCATCTCCAGCATCCACCCGGAGCAGTCTGTCATCATGCCACCACACAGCATCACCCAGACTGTGTCCCTCAGTCACCTGTCTCAGGGCGAGGTGAGGATGAACACGCCCACACTGCCCAGCATCACTTACAGCATCCGGCCCGAGACACTCCACTCTCCACGGGCCCCCCTGCAGCCGCAGCAGATAGAGGTCCGGGCCCCGCAGCGTGCCGGCACCCCCCAGCCGGCCGCAGCTGGGGTGCCCACCCTGGCCTCCCAGCACCCTCCAGAGGAGGAGGTGCACTACCACCTGCCCGTGGCTCGAGCCGCAGCCCCTGTGCAGTCAGAGGTGCTGGTCATGCAGTCTGAGTACCGGCTGCACCCGTACACCGTGCCTCGGGATGTGAGGATCATGGTGCATCCTCATGTGACTGCCGTCAGCGAGCAGCCCCGGGCGGCAGACGGGGTCGGGAAGGTGCCCGCAGCCAGCAAGGCCCCTCAGCAGCCAGGGAAAGAAGCCGCTAAGACGGCAGATGCCAAAGCTGCCCCTGCCCCTGCCCCTCACGGGGAGGCCCGCATCGTCACAGTCACCCCTGGCAGCCAGCTCCAGGGGCTGCCTCTGACTCCACCAGTGGTGGTGACCCACGGTGTGCAGATCGTGCACTCGAGCGGGGAGCTCTTCCAGGAGTACCGGTACGGAGATGTCCGCAGCTACCATGGCCCGGCCCAGCTCACACACACGCAGTTCCCTGCCACGGCCTCCATCGGCCTGCCTTCCCGGACCAAGGTTCCCACCCAGGGGCCCCCTGAAGGCGAGCCCTTACAGCCTGCTCAGCCCACACAGCCCCTTCAGCCTGTGCAATCTGCACAGCCGGCCCAGCCTGCACAGCCCTCCCAGCTCAGCCAGCCTCCAAGCAGCAAGATGCCTCCGGTGTCCCAGGAAGCCAAGGGCACCCAGACAGGAGTCGAGCAGCCGCGCCTTCCTAACGTCTCTGCCAACAGGCCAGCTGAGCCTCACACCCAGGTCCAGAGGGCACAGGCAGAGACGAGCCAGACCTCCTATCCCTCCCCTGTGTGTGTCTCCTTGAAGCCTGACCTCCCGACTCCTCTTCCTGCTCAGGCTGCCCCAAAGCAGCCACTGTTTGTCCCCACCTCCTCAGGCCCCAGCACCCCTCCAGGACTGGCTCTGCCCCATACTGAAGCCCCACTCACCCCCAAACAAGATTCCTCTCCACACTTGACTTCCCAGAGGCCTGTGGATATGGTGCAGCTTCTGAAGAAGTACCCCATCGTGTGGCAGGGCCTCCTGGCTCTCAAGAACGACACAGCTGCTGTGCAGCTCCACTTCGTCTCTGGCAACAATGTCCTGGCCCATCGGTCCCTGCCCCTCTCTGAAGGAGGGCCCCCGCTGCGGATTGCCCAGAGGATGCGGCTGGAGGCCTCACAGCTGGAAGGGGTTGCCCGAAGGATGACGGTGGAGACAGATTACTGTCTGCTGCTGGCTCTGCCCTGTGGCCGAGACCAAGAGGACGTCGTGAGCCAAACAGAGTCGCTGAAGGCTGCCTTCATCACATATCTGCAGGCCAAGCAGGCGGCAGGGATCATTAATGTTCCCAACCCCGGCTCCAATCAGCCTGCCTACGTGCTGCAGATCTTCCCGCCCTGCGAGTTCTCTGAGAGTCACCTGTCCCGGCTGGCCCCTGACCTCCTGGCCAGCATCTCCAACATTTCTCCTCACCTCATGATTGTCATTGCCTCTGTGTGAGCCACTGAATGGTCACCACTCAGTGCATCTTCCTGAGGCTCTGCAGCAAAAAATAACACACAGGACAACCCAGCCAAGTGGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCTCACCCTCCTGCCCGCCCGCTCGGCTCAGTCGGACAGATCCCTCTGGGCAGTGGTGCTGCTACTTGTATGTTTACATGACGTTTAGCCCAAGGACAGACCACCAACCGATGGACTTGCAGACACCTTGAGGCTGGGTTTCTCTCTCCTCTTTTTGGAGAAAAGGAACAGGGCAGTGGGATTTTTTTTGTTGTTTTTGTTTTTAAGAAACAAAACAGAACTGCCTTTGCACTAAATTAGTGACTTGGACTTTTGCACAGTGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTACGTGAACACACATCGCACTCACGCAGGACTTCAAACATCTGCTGAAACCTTGGGGTCGAGGAACATTTCATTGTTTGGTCCCCACTCCTCCTTCCCCTTGCTCATTTGGATGTCACCTCTTAATTCTGCCACCACCATCTTTGATGCACCCAGGATGTACAGTTTACAATCAAAAAGAGCAAACGGAAGGATTCTCTCTCCTAGTGGAATATGCAGAACTTGGGATGTGTGTATATATAAATATATAATATATATAAATATATATAATACTGACTTAAAAATCAAATTCCCTGACATACATTTTTTTTAATCTGTGCCAAAAATGTGTTTTCAGAGAAAATCTTATTTTCATACTCAGACTTTGTATTGTCACTCATTTGTATAAGTGCGCTTCGTTATAGCACGGGCCCTGACCCCACAATTTGGAAGTGTCACACACACAAAAAGACTGGCTTCCCTTCTTCCTGTGACCTTGACCTCTCCCTCAACTTCCTAACACTTATTAATTTATGAAACTGTTTTTCTCAGCGCAGTTTTGTTTTGTGTGTCCATTGGATTACAAACTTTATTAAAAAATACAAAACATGTCAAGTGTGGATGTGACTTTGACTTGGATGGGAGGACCAGGGGTCCTTGGCCTCTAGGAACAGTAAGCCCTCACACCCCAAGTTTGCTTTCAGCCCCCTAAGTCTGTATATGGAACCCATCTCCTTCCTGCCACTAGTCCTGCCCAAGGATCATTTTATCTTGTACAAAAAAAACTTTCATCACAGACGACGACTTGAACCACCTTTTCACTGCTGTGGTGGTAATGTGACACTTCAAGGTCCCAACTGGTTTCTGGGTAATGTTGAAGGCACTTCAAATTTGGTAAAAGAATAGAGCCACTGCCCAAACTCAGACACATATTAAGCTTTGGGGTCTTGTCCCTTCCTCCTCTGGATAAGGTGCAGGTTGACCCTGCAGCAGCTGCCTCCGAACAGCTGGACCCACCACAAGATGAGCAGTTGGGCAGGAGGGACTGAACACAAAGACTGGTCTCACTTGCAGTATCCCCGGACTCCAGTGCTGGATGGGGCCATCTCTGAGTGAGGAGTTACAGCTGTTGGGGACGAGCCATATGGAAAGGCAGCAGAGACGGCGTCTCAGGAGCCCCTGCTTCTCCACCCCCGCTGCTGCACAGCCCACCTCCCCACCAGAGCTCCTGGCCGCTCACTCCTGTCCCTCCAGCCCCTCACCTTAAGAGATCCACTGACTGAGGGCAAGTAAATGTTCCCAGAAGATGACGCTGGCCTGGCCTTGATCTTGCAGCCAGAGTTACCATGAAGCAAGTGTGGTGTGCTCTGGCTTCCTTAAGCCCAAAAGAACCTGGCCTGTGGCCTGCTTGGTTTGGTACTCTGCCTACCT EMBV3_23393 AGCTGGCCACTCTCCACAACTTGCTGCTGTCATATTCTTGAGGGCCATCGCTCTGACTTT Gene GeneID:317658|HMGCL:NM_001075132:48_cdna Constitutive 1 NULL GeneID:317658 2 GENE HMGCL NULL 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase EMBV3_31186 TGGCATTCTCATTACCCCCTCACCATTTATTTGACCCTGCAATTCTCAACTTGGGCAGTG Gene GeneID:534742|SLC25A24:NM_001099066:152_cdna UTR3_Alt 2 NULL GeneID:534742 3 GENE SLC25A24 MGC157062 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 EMBV3_10606 GGACAGATCTGCATTTACCCCTTTTGTTTTCTGTTTACCCACATAGATAGTAAGTGAGAG Gene BVT0102_053631 + 0 NULL GK000012.2:50510984-50677975 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27305 ATGATGGTGAAACGCATGCAGCATATCCCTACCCCGCTCTTCGTTCTGGAGATCTGGAAA Gene GeneID:504613|MED24:NM_001045892:67_cdna Constitutive 0 NULL GeneID:504613 19 GENE MED24 MGC137398 THRAP4 mediator complex subunit 24 EMBV3_01209 ACCATCAAGTGCCTGCTGATCCACCCCAACCCCAGCAGGGGCTGAGGGGCCCATGGCCAA Variant GeneID:617703|UBE2S:NM_001076472:187_cdna 609^799 4 EMBV3_23201 GeneID:617703 18 GENE UBE2S NULL ubiquitin-conjugating enzyme E2S EMBV3_02259 TAATTAAGTGTGTGGTATGTGGGCGTTTGAAGGTGTGGGTAATGTCCACCCCATGAGGGG Gene GeneID:505842|AACS:NM_001163929:63_cdna Constitutive 0 NULL GeneID:505842 17 GENE AACS NULL acetoacetyl-CoA synthetase EMBV3_13233 GGCTCATGCTCGTGGACAGTTACTCAACCTTTTCTACCACTGCAAAAACAAAAGAAGAAA Gene GeneID:539968|LINGO2:XM_002689490:9_cdna Constitutive 0 NULL GeneID:539968 8 GENE LINGO2 NULL leucine rich repeat and Ig domain containing 2 EMBV3_22145 CTAAATAGACAGCCGATGGAGGGTAGATCTCGTGATGGTGGCTTGCGTTTTGGAGAGATG Gene GeneID:538184|POLR2B:NM_001099082:122_cdna Constitutive 0 NULL GeneID:538184 6 GENE POLR2B MGC157298 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa EMBV3_24679 GTCCTCTGTGTTTTATACCTGCATTGTACCCATGCTAAACCCTCTGATCTACAGTCTGCG Gene GeneID:782009|LOC782009:XM_002699176:79_cdna Constitutive 0 NULL GeneID:782009 29 GENE LOC782009 NULL similar to Olfactory receptor 8G2 (Olfactory receptor OR11-297) (Olfactory receptor TPCR120) EMBV3_01128 AGAAGGATATTCAGGGAAAAGTCTGTCTAACCCCAGGTTCTCTGCATCCTGCTTTCAGCA Gene GeneID:282342|POLR1B:NM_001100292:20_cdna Constitutive 0 NULL GeneID:282342 11 GENE POLR1B RPOL-1l polymerase (RNA) I polypeptide B, 128kDa EMBV3_07077 AGCCACGCTGCTGAACATGCTGAACATCTCCCCCAGCCAAGGTTGAAGCAAAGGAGGAGT Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 603^943 11 EMBV3_14209 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_39654 CATACGAAAGGGCACAGTGCTTTTCCATTTGATCCATCCTTTACTGCTTTGATAACCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08157 GACTGATGCTGAAGCTCCAATACTGTGGCCACCTGATGCGAAGAGCCGACTTGTTGGAAA Gene BVV0102_274866 + 1 EMBV3_35959 GK000025.2:2362034-2372470 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185534 TCONS_00250013 TCONS_00233570 TCONS_00147668 TCONS_00099001 TCONS_00140829 6 XLOC_111613 XLOC_152956 XLOC_143052 XLOC_089555 XLOC_059245 XLOC_085258 Coding TCONS_00250013 XLOC_152956 NonCoding NonCoding - X:30403877-30408757 - TSS187234 4880 1 TCONS_00250013_8 94 0.384426229508197 1 0 0.00309789697218654 0.00365319750758269 0.00281146784274146 0.00205902044037371 0.00232593713252446 0.000764117406294676 0.00164959537846707 0.00114052186212376 0.00238440577563481 2.10783194328888e-05 7.50552163043802e-06 1.64862353019964e-06 5.4093215011563e-05 3.85573338942106e-06 0.000155832168058986 1.62366019959233e-05 0 6.35557462989221e-06 0.00414214148109091 0.00326805633200268 0.00140610097723149 1.74872245947231e-05 7.51971943225039e-06 3.43539026198962e-06 0.00342041974005229 0.0038018317756466 0.00191655419485179 0 0 2.95684337879241e-05 NM_001192736.1 GLA Bos taurus galactosidase, alpha (GLA), mRNA. 2e-94 352 78.10 0.0776639344262295 NR_046484.1 RNU6-10P Homo sapiens RNA, U6 small nuclear 10, pseudogene (RNU6-10P), small 6e-25 122 85.98 0.0217213114754098 0 noncoding AATATAAAGTTTACTAGTTTATAAAAAACAGTTGGAATAAATAAAATATTTAAAGGCTTTTCCCCATTTTTCCTCAGTCTCAGGAGTTAGAGATGGTCTATAGTAAATGTTCCTGAGAGCAGAGCTAGAGTCCTAGTCTCAAGGCACAGGGAAAGAAAATCAAGTTCTAACAAAATGGTGGCAGGTCTAAACCAAATGGTGGCCAAAGCAAAATGGTCATCAAAAATCACAACACAGAACATAGAGTTAAAACACACACATAGACCTGGCAGTCCTTATCAGACACTCCCTTAAATATAATACAGCCTCTCAGAAAACCTCCTATAGAAACACAGAACATCAGATCCAAGTACTAACAGAGTAATTAAAAATATCTCAGGTCTTCAAAGATTTCAAAGGGAGGAAAGGAAGCTAGGTTTAAAGAAGAAGGGGGAGGAGGGGGAGCAGTTTATGGTGATGGAATTAGTTTCCCGGTTGTCTTTAGCCAATCATTCTGACTCAAGAGTCCTTCCTGGTGGTGAGACATGTGGTATCTCCTTTTGACCTTTCCCAAACTCTTCCGGTTGGTAGAGGCTCATTAGTTCCATGTTCCTTACTAGGACCTCTGGTCATAAAACCACTCATGCTATGGTGCCTGGCCAGGGTGGGTGGTTTCAGTAAGTGTGCTTCCCCTAACATATATACTCTGTTCCTTATCCCCAAAGCTCATGAGTAAGATAAGTCACATCACCTTCCTTAAGGAGAAATAAAAGAATAGGTGAGAAGAGGTTCTTTTACCTTCGAGGTCCAATTCATATATTATCTCTGAACAAAATCTTTCATGGCCCTTCTACTCTGAAATAATTTTTACCCTTCTTGAATCTTCTTTGGGTAGTATATGTGTCTCTCTTAAAGCACAGACCATATTATTTAAGAAGTGATCACTATCATTTATACCTATATTATTTTCATTACTGTTCATCCTTTTATTCAACAATTATATCTAGATCACTCTCAATGTTTCAGGCAATATGCCAAGTGCTGATGAACATTACATAGTTTCTATTCTCCTTGAGCTTAAAAGCTGGTTGGGGAGATGATCAATAATTTCCTTGAGAGATAAATCTACATCTATTCTTTTCTTTGTACCTCTAATATTTGCTCAGTAAAAGTTCATATAATGAATTATAAAATATTAATAAATAGAAATATCAATTAAATAGAGCTGGTAGATGGGAAAGGGGAGCTCTCTGATCCTGTGTTGACAGCAGAGCCCAACACAAAGATTCTTCTTTGCAGGCAAGGACTCAGCCAACGAAAAGCCATGGATTCTGTGTTTACTCTATCCCTCCCAACTTCCTCTTCTCCTTTCCTTGTCATGCAGGAACTTGCACATGGCTCACCATGGTTACAGACTTTGAGTTACAATTCTCTGCTGACCTTAAATAAACTTGTTGGATAGAATAGGAAACAGGAGTCCAGAATAGCAGTGGCTAAAAGATAAGAAAGGGAAAAGCCCACAAAAGTAGAACAAAGGAAGGTCCGAGGATCAGAATGAGGACCTCAGGTAGAAAAAACAGCACTCCTGGCTAACCCAATTTACATAGCGCAGGCCCAGGGGGAGGAAAAAATATATACAAAGAGGAGCCAAAGGCCCAGGGTTCTCTCTCTCTCTCCTGCATGCTGGCACATTCCCCCACTCTCTTCTCTTCGTGTCTTTGGGTCAGCCTGCCCTCACGCCTCAAGGATGGATTTTCCTGCTATTTTCTACATAAAATAGAGCTGTAACATGGAGCTGTAACACTGATCTGTCTAAAAGCTATAACAGTCTGTCCAAGACCCGAGAGCTATAACAGGGTCTGTCCAAGAGCTATGACGTGAGGAGGGCTGTAACATCTGTCGCTTCAAATTTTTGTTGGGACAAGACAGAACCTAGGAGAATACACTCGCCTGACAAATCCATCTTTTCTTCAGAAATACCTGGTATACTACGTGCTTCAGGGGAACAGAATGAATAGTTCAATAAAAAAGTCACTATTTGCCTCAATACTAGGAGTCAAAATAAAAGCAAACATATTAACTCAATTAGAAGTGTCAATTTTTAAATTAATAAGTACTCAAATTATACTTGAAGCCTTTGAAATACTAGTAATTCTGCAGAACATGTTCACATATAAAATATGAAGTGCTAATAAACATAACTAAATATCATTAATATAATGACATTCCAACACAAACAAAGCATTTCATGTAATAATTCCTAGTCAGAACCAGCTGGCACAATCTTACAGATAAAAAGACATCAGCATCCAAACAGATGAGCAAATCATTAAATAAATCACCACATTATTAGCTTGCAGACAAGTCCAACAGTTTGAGCAGGCTCACAATTCATAACTTGCTACAAAGCAAATTTATAAGGTAATTGTTAAAGATCTCATCCAGCAGTGTAAAAATGTAGGGTAGATCTCATGGAATATAAAAATACAATCCAAGCTCATTTATTTCCACAGTAAAGCACAACTTTGACCACTCAGATTTTAGTGTATGTATGATTTACCTAGTACAACTTTTAAAAATTTCCTTTTCTGAACTCTACTCCAAAAGATTTTGGTTGCTTTGGTTTGAGATAAGACCCCAGTATTTGGATTTTATAGGCATGGAAAATTCTTATGCAGGTGGTCACTGGACCACACAGTATTTGTGAAATAATGTTCTAGATTGAGAATCATTTTTCAGCAATTGCTTGCTTTGGCAACACATGTACTAAAAACTGGAACAATACAAAGAAAATTAGCATGGCCCCTGCACAAGGATGACAGGCTAATTCATGAAGCATTCTTTATTTTTAGAAACAGATTCATGGACATAGAGAACAGACTCCTGGTTGCCAAGGAGGAGAGCAGGGATAGGGGAGAGATGGATTGGGAGTTTGGGATTAGCAGATGCAAACTATAATATATACAATGGATAAACAATGAGGTCCATGGAACTATATTCAATATTCTGTGATAAAACATAATGGAAAAGTTATGAAAAAGAATATGTGTGTGTGTGTGTGTGTATACACATATGTATAACTGAATCACTTGGCTGTACAGCAGAAATTAACATAAATCTATTATACTTCAATAAAATAATTTTTTTAAATAATTACTTTCCAGTCATCTAGACAAATTAACTCTCCGATAACTGCTTCTTAATTTACAGATAGAACTCTGTCATATATGGAAATGGAAAGATAATTTTCACTCTACTTTTCTAGGTTCTTGGCTGAGACCTCCCTATAATAAAGAGTCAGATTAACAGGAGAAAAACAGAATTTTAATAACATTTTTCACTCCTGTACACATGGGAAAGACCCAAGAAAACTGATAATTTCTGAAACAGTCCAAGTCATCATCTTAAATACCATTTCCAGCTAGAGACAAAACAAGATGTTGGGGGCTGTGGGAAGGGGGCCCAGTTTTAGGAGATGATCAGAAGAGCACAGTAAACAAGAGTAAAGGCTGTTATGCAGATTTAAGTCCTTGACCTCTGCATTAACAAGAGATTCTAGAAATGTAAAGTCTACTTTCTCTTCCTAGTACAGCAAGGGAGACACCCTTACAAATGGAGATTTTCCTTATAAACGCAAATATCTCTTACAAAAGAATAGCTTCTACTAAGTTTTCAGAGTTTTTCCTATGTCTGCTGTTTCTTAAAAATAATCAGCCTAAAATAATCCTTATGCCAATGAGGCATATTTTGGGGTGATATTTTGGTCCCCTTCACATAAATCTTCTGAGGCAACAGATATGTTAAGATACTGTAAAGGGAGTGCCCCTCAAATGTGACTATATAATGGAACCAAATGGGAATATTTAAAATATACCAATAATTGGATCCCTTAATTTAAAAGTTTGATTTAATTGGTCTGGGATGCATCCTGAGGATTAGAACTTCTAAAAATCTCCTCAGATGATTTTTATGTGAAACTAAGATTAAGAATTTTTAATATACCTGAAGTGCTTCTCAGACATTAATACATATTAAAGACTTTGCTAAACAGACTCTAGTTTTTGTATGACTATTTAATCTGTGTAGAAACTAACCTTCCCACTGATGACATATTAACTACAAAATACTAAAAAAAAAAAAAAAACAAAACCACAGCTTGATCCTGCCTCCCCTTCACATAATTTCTTGATTTTTAAATGTATTATATTAAAATCTTAGAGATTTAAAAGAAATCTGTGGGGTTTTCTTGTGAAATGACTGATATTATTTTTCAAAGTAAAGACATAAAGTAATGAATAAATCATGAAAAAGGCTTAAATTAAGCTAGGTATGAGATGCTCCTTGGTTCATTCCTCTTTCTCAGGTTAACTTTGAAATGAGCCTTTGTTATCCTTATTAGCAAAAATTCCATGGCCACTTGCTCTTTACAATGTAAGGATGGTTATCATATCATTCCAGCCCCAGTATGGTATCCAGGAGACTAAATTTCATACACACACACATATTGATGCAGCAATTGTTGTTCAGTCACTAAGTTGTGTGTGACCCCATGGACTGTAGCATGTCTGCTTCCCCGTCCTTCACCATCTCCCAGAGATTGCTCACACATGTCCACTGATGCCATCCTACCATCCCATCCTCTGTTGTACCCTTATCTTGCCCTCAATCTTTTGCAGCCTAATGGCCTTTTCCAATGAGTCGGCTCTTCACATCAGGTGGCCAAAATATTGGAGCTTCAGCATCAGTCCTTCCAATAAATATTCAGGGTTGATTTCCTTTAGAATTGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTTAAGAATTCAAAAGCATCAATTCTTCAGTGCTCAGCCTTCTTTATGGTCCAGTTCTCACATCCATACATGACTACTGGAAA TCONS_00243982 TCONS_00243983 TCONS_00243985 . 3' 476598 TCONS_00243982 TCONS_00243983 TCONS_00243985 . 3' 481477 EMBV3_17311 ATCAGCAGGCAGACTCCTCACCACTGAGCCACCAGGGTAGCCCTGCGGGGACATTACCAA Gene BVT0102_439731 - 1 EMBV3_18466 GK000016.2:78623833-78755027 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068353 1 XLOC_041661 NonCoding TCONS_00068353 XLOC_041661 NonCoding NonCoding - 16:78661347-78664033 - TSS51188 2686 2 TCONS_00068353_2 94 0.133283693224125 1 0 0.000288727451130161 0.000188140085187961 0.000163967330528539 3.9406874364153e-05 0.000203191530147105 9.26027494542952e-06 0.000111093471908484 1.5978716514616e-05 0.000126312620062562 0 0 1.6316487384744e-12 2.45694487351427e-05 5.41310990324115e-06 5.47974369230876e-06 0 0 8.88185126008799e-05 0.000258866107220455 0.000390221858394578 0.000236212373568123 0 0 0 4.66310313143759e-05 0.000104020729477878 0.000163602429886116 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 3e-32 145 70.91 0.11578555472822 0 noncoding CTTTATTTCATTAACTGGGAAGTTACAAACCAAAAAAAAAAAAAGAAGTCTTAATGAAATTCACTCTAAATATACTTACACACATATTAAAGCTGTTAACCACAAACTACAAACGGAGTATCACTATAAACCGGGAAAATGAGAAAACCCAACCGACAGAGGTATACTTGATCCTCAGTTCAGAGATCTTTGCACCACAGCAAGTTTGCATCATTCTAATTAATTCAGGTGTACCCGGCTTTCTTTAAAATTAAAATGCTCCCCTGAGGGCTGTCTATCAGGTGTTCACACCTCACTGTGAATTACTTTCATCAGATAAATACATTAAGTAACACCACCTACTGAAAGCAACTGTGATTTGAGGAATGGTGAGCCAGGTCCGTAGGGCAGGGGAGGGCTGTGCCGGGCTAGCTGGCCAGGGTCTCCGTGCACTCACGGGGCAGCATGACGACGAGGCACACACCCGGAGAGTTCCCAGGGTCAGAAAAGCCATTAAAGTGATGCCCTTTACGGACACTTCCAGGTCCCTGATTCTACGTTCTCTGGTGAAGTGTGCCCAGAGAACCCAGAGCCTGAAACAGTGTCTGACCCCAAGGATCTGTTCAGTGAATATTTGTTCAACTGTTGAAGCACCATTATTAAGGTATTAAGATGGCTTTTAAAGAAAAAGAATGAAAATTGAGAAGGGTACTGAGGTATTACTATTAAAATCTTTTCTTTAAGAATGTAACAACTTTTATCAAGCAGGTGAAATTTGTGGAAGTGAAGCTACATTAGTAAAAGATATAAAAAGAAGTCGCTGAGTAATAATCCTTTTGATTAAAGCTGCAAAATTAAACAACATGTGAATAAATAAAAGCACCTAATGAGACAAGTTATAATCAGAAAACGAGCTCTGCAGCATCCCTATCAGAGTGAGAATCGATAAACGCTGAGCCCTGAAGATGACTCGCTTCCTACCCTCCAGGCAGCTGCGGGGAGGAGGGGGTGATCTCAGAGCCAAAGAGAAAAGTGCACCTGTTCTCAACTACGTTCCAGGTAGAACCGAAGGGTCTGTCTCGGAGGTGCGCCCCTGAAGAGCCACAGGAAACTCTGCCCCTGGTTAGCAGCTATGAGAAAATAAGCGCTGCTTTCTGCTCCAACATGGGGTACGCTGTCGGAGCTCTCACTGAAGATCTGCTCTAATTCATCCTGGCGCACCTGGGGTGAGAGAAACTCAAGAATTCCTTAACCAACACGAAGCTGGAGCAGAAAAGCATCGTAACTGCATTTTACTCACAGATTTTGTTTTCCCCCCACTTCAGGCAACATGTAAATCTCCTAGACCATCTTATGTATGATTCACCAAAGTTCTACTCTCTAAATGCCAGGGTTTTCTGGGGTTTTCAGCATGTGTGGAGGGGTATCAATGGGCTTCAAGGTGGCCTCCACAAACACACATACACGGCACGTGTTCCAGTAAATCCTGTGATGGGAGGCAGGGGCAGAGTGGATGTAGGGCCTGAATCGGGGAGGGGGGGGTGCCTGAGTACAGGAACCCCAAACAGCCCCGCCCCAGGCAGAGGGTGACAGGTTAGTAATGTCCCCGCAGGGCTACCCTGATGGCTCAGTGGTGAGGAGTCTGCCTGCTGATGCAGGAGACGGGGGTTCGATCCCTGGTCCAGGGAGATCCCACACGCTGCAAGGCAGCTAGCCCGGGCACCACAATTGCTGAGCTTGTGCTCTGGAGCCTGGGACCACAACTCCTAAAGTCCGCACACCCGAGACCCGCGCGTCACAACGAGAGGCCACCACGGCGAGCAGCCGCCCGAGAGTAGCCCCCGCGCGTCACAACGAGAGGAAGCCCACTCGCAGCAACAGAGACCCAGCGCGGCCAAAAATAACTACATGAATCTAAAAATTAATAACGTCCTCGCTGCTGCCCACCAGCCAGCACGCACTGAGGGTCACGTCCACAAGCGCGGCCTCTGTGCACTCACTGGACCAACATTAATCTGACCAACAGTCAGACACTGCGCTCAGACCACTTTCTGTCGTGCATTCTGTAAATGCTAAACATGCCAGCGGCTGCACTACACTGTTCCTTAAGAATACAGTCGCTGGGTCACCGGCTGGTACTCGAAGAGGTCACTCGGAGCAGGGCAAGCAGATGCTAAGACCTGTCTGCGTGTCTCTGCATTACTATCTTAGATGTACCTGAAGAACGTGATACAGGCAGAAGCAAAATGTTACGAATCTGTGTAAACAGTATCCCTCAAGGCAAAAACCTATCAAATGCAAAAGGGAGCTCAGCAGGACACAGTCAGGATTCTTTGGCCTACGGTTGTGATTTTAAAAACAGGAGACAGTTAGGACTATTCACGTGAGCTGGAGATCAAAGGACGGAGCATCTGATACTGACTGGGCTGGAGAAACGGATAAAAGTGGAAAGTTGGTGGCAAGGTGGGATCTGCTCCTAAGAGAAGTTACTCTCTCTGGCTAAAGAGAATGGCATAAAGAAGACAAGGTCTGCTAAAAGATGCACGGAAAACCACCAATAAATAAAAATGTTAGCGCAAAGATTCACTAAACATGGACATGGAAATCCTAAGAGTGGTGCAGTGTGAATACCACAAGGGCAAGGCTCAGTAAGCATTGTGGAATCACACCTCATTCATTAACTTCCCAGAAGACACTGTATTCCTGC TCONS_00070363 r 5' 3869 TCONS_00070363 r 5' 3869 EMBV3_38388 TGTTCCTGTAATGTTCCTACATGTCATTTCGCAGGAGCAAGAGCCATAGGAAACGACCAT Gene GeneID:539121|MLL5:XM_002686762:57_cdna UTR3_Alt 2 NULL GeneID:539121 4 GENE MLL5 MGC151673 myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) EMBV3_33867 GCTTGTGTATTCTGTCACCTCTCTGCATAGACAGGGAGGTCCAGGCTGTTGAGGGGAAGA Variant GeneID:353300|RHEBL1:NM_181668:20_cdna 295^395 2 EMBV3_32074 GeneID:353300 5 GENE RHEBL1 NULL Ras homolog enriched in brain like 1 EMBV3_37986 AAAAGATCAACTTATTGTAAAGATGCAGCAGGGGACCTCAAGGGACCCAAGGGCCACGTC Gene BVT0101_006473 + 0 NULL GK000009.2:44307626-44355219 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08727 ACCCCCAGACTCTTATGTAGCAAATCAGCAAACGTGTCACTGGGTGGTTTGTGAACCGTC Gene GeneID:533826|CAND2:XM_002697106:7_cdna Constitutive 0 NULL GeneID:533826 22 GENE CAND2 NULL cullin-associated and neddylation-dissociated 2 (putative) EMBV3_09746 CTGTTTAGCTAAGCTTGACAGATTGAAAGACTAATGTCATTGTTTTTTAGTAGGAGACAG Gene GeneID:614746|EIF2A:NM_001102283:59_cdna Constitutive 0 NULL GeneID:614746 1 GENE EIF2A MGC165771 eukaryotic translation initiation factor 2A, 65kDa EMBV3_03651 AAGCACTTCGCACTATACTGAATGGCTCCAGGCACTGTCCTCAAAGCTCTTTCGGCCTTA Gene BVV0102_265334 - 0 NULL GK000018.2:52143436-52152025 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086755 TCONS_00086756 1 XLOC_052242 Coding TCONS_00086755 XLOC_052242 Coding Coding IRGQ 18:52148049-52155244 = TSS64507 5845 1 TCONS_00086755_4 622 0.152266894781865 2 0.187795385043091 1.55486595030862e-10 1.53270772603644e-06 2.13737064114929e-05 2.55730189585617e-05 6.81398235870137e-05 6.41127804639811e-06 4.20282490359393e-08 1.39560302612542e-20 3.23974113620003e-05 0.000691322738038106 0.000118714863913622 0.000136284765580564 5.3399653401289e-05 7.93017068942907e-05 0.000111233426621823 0.00242368836401701 0.000412121968955146 0.000793148005583279 5.05316499232264e-07 0.000249262363343122 2.62083372488506e-10 0.00142675336860051 0.000498753979856049 0.0013893673772438 1.68711872775907e-10 1.0582384968468e-13 7.33801193842831e-05 0.000583494354578893 0.000405219430109254 0.00271599188788764 XM_005219347.1 IRGQ PREDICTED: Bos taurus immunity-related GTPase family, Q (IRGQ), 0.0 1.054e+04 100.00 0.999828913601369 NM_001007561.2 IRGQ Homo sapiens immunity-related GTPase family, Q (IRGQ), mRNA. 0.0 1867 82.22 0.319589392643285 TCONS_00086755_4 sp|Q8WZA9|IRGQ_HUMAN IRGQ_HUMAN Immunity-related GTPase family Q protein; 0.0 758 83.20 0.998392282958199 0 coding 0 0 0 0 -0.0262587000040732 0.859001951564331 0.030937238945716 0.591777565053198 ATGCCTCCACCGAGAGGTGACGTGACCGTCTTATTCCTGGGGCCTCCGGGCTCCGGAAAATCTGCGCTGATTGCAGCGCTGTGCGACAGAGATGTGGAGACGGTCGAGATCCCCGACGGACGGCCGGATTCCGGGCTCCCCAGCCTGCGAGCTGCAGGCCCAGGCCTTTTCCTGGGCGAGCTGAGCTGCCCACCCGCAGAGCCGGGACCCTGGGCGGCGGAGGCCAACGTGCTGGTACTGGTGCTGCCAGGCCCCGAGGGCAATGAGGAGCCCTTGGCCCCGGCGCTGGGGGAGGCAGCACGGGCCGCCCTGGCCCGAGGGACCCCGCTGCTGGCTGTGCGTAATCTCCGACCCGAGGAGTCACAGAATGAAGCCCAGGCCCGGGATCAGACCGCGGCCCTGCTGGACAGCGCCGGGTTGGGCGCCGCGGCTCTCTTCGTGCCACGGACCGACTGCCTCAGCACCGACGGCTGCGAGGAGCTAGAGCGCCTGCGAGCGGCGCTGCGGAGCCAGGCCGAGGCGCTGCAGAGGCTCCTTCCACCAGCTCAGGATGGCTTCGAGGTGTTGGGCGCTGCGGAGTTGGAGGCTGTGCGGGAGGCCTTTGAGACTGGGGGCCTGGAGGCGGCCCTGTCGTGGGTTCGGGCCGGCCTGGAGCGACTGGGCAGCGCACGCCTGGACCTGGCCGTGGCCGGTAGGGCTGACGTGGGCCTTGTGTTGAACGTGCTTCTCGGGTTAGATCCTGAAGATCCGGGTGCAGTGCCTGCTGCAGCACCTGCAGGGCCCACGCCCTACCCGACCCCAGAGCGCCCCAACGTGGTGCTCTGGAGCGTGCCTCTGAGCTCCGCGGACACCACCGTCGCCCCGTACCCGACCACCCACTACGACGCTCTCATCCTCGTCACCCCTGGGGCACCCACTGAGAAGGACTGGGCCCAGGTCCGGCCCTTGGTGCTACCAGATACACCATTGGTCTGTGTGCGAACAGACGGCGAGGGCGAGGACCCAGAGTCTCTGGAAGAAGAGGAAAAGGCAGAGAAGTCTGGCAGCGAGAGCTTAGAGAACGCAGACGGAGAGGGGTTTGAGAATGCCCGCAGTGATGGAAAGGAGAACCGCGGCCCCGGATTGCAAAAGGGAGGCAGTGGGGAAGGTTCAGAGGAAGCAGGCACGGAGAGTTTGCAGCCAGTGGGCGTCAGCACGAAGAAATCCGGCAGCGGGGACTCGGAGCGCGCGGCTGCCCTGAGCCCCGAGGACGAAACGTGGGAGGTGCTAGAGGAGGCGCCGCCGCCCGTGTTCCCGCTGCAGCCGGCCGGGCTCCCGGGGCTGTGCGAGTGGCTGCGGCGCGCGCTCCCCCCGGCCCAGGCGGGGGCGCTGCTGCTCGCGCTGCCGCCCGCATCTTCCCGCGCGGCCCGGACCAAGGCTGCTGCGCTGCGGGCCGGGGCCTGGCGGCCGGCCCTGCTGGCTAGCCTGGCGGCGGCGGCGGCCCCAGTCCCAGGGTTGGGCTGGGCGTGCGACGTGGCACTCCTGCGGGGTCAGCTAGCTGAGTGGCGGCGGGCGCTGGGGCTCGAACCCGCGGCGCTGGCCCGACGCGAGCGCGCGCTGGGCCTGGCTCCCGGGGAGTTGGCCAAGCGGACGCACTTCCCCGGCCCGGTGACACCAGCCGAAGTGGAGGCGAGGCTGGGCTCGTGGGCAGGCGAGCGCACCGCCGGGGGCGCGGCTCTGGGCGCACTCTCTTTCCTGTGGCCGGCGGGCGGCGCTGCGGCCACCGGGGGCCTGGGCTACCGCGCGGCGCACGGCGTCCTGCTGCAGGCGCTGGACGAGATGTGCGCGGACGCCGAGGCAGTGCTGGCGCCGCAGGTGCCTGCGCAGTGAAAGCTGGGCTGAGGGCTGGGGCTTCCTGGTGTGCCCTGGGCCCCAGCTGCCTGGCTCTGCCAGGGCCAGAGGACTCAAGACCCGGTGAGAGGGAGAGGGCACGGGGTCCAGACTCTAGCATGGGATGTCTGGGCCTGAGATATCGCAGAGCAAGGGGTCCGCCAGTCAGAATCCTGGGTGCTTGAAGGGAATGAGGGCTCTGACTAGGGGTTGGAGTGGGTGACGTCTGGTCACCAGGATTCCTGGGTCCTGAAGGGAAATAGAGTTCTGAGGACGGGACTCCTAATTTCTCTGGGGACCATCAAACTATGGAACTCCTCAAAGGAGTTGAGGGTTTGGACTCCTGGAAGGGGGCTATCTTGGTCTCTCAAGAGTAGAAACTAGATCTAATAGGTGTCTAGTCCCCCTGCGGAGGAGGAGGTGGACGCCCTGATTGCTGATGAAGGCGGTCTCCTTCACACTAGGGATTCTGACATGGAGGAGGGGTGGTCTGGGTTCCCCAGGGAGCTGAAATCCTTGGGCTTCTGAGCCACAAAGGTATATAAGATCTAGGTTTCTGGGGGTGGGGGAAGGACGGTTCTCTGGACTCTCAGAATGCCTGGCTCCCCAGAGGGCTGAGGTCTTTGCTTTCTAATTCATGGGTGGTGGAAGGTATCCATGTAGAGGAGGGAATCGGGTGCTGTGTGAGAGAGCTGGAGACCCTGTGGTCTTGGGAAACGGAGGGGTGTAATATTTGCCCCTCCAGAAGCTTGGGGGCGCAGATTTCTTTCCCCGCTGTTGTGAGGAGGATGGTACCACAAAACACGAGAGGAAGCAAGAGTGTTCTGGGCATGGTTGGGCTGGGGAGTAGCCAGAGACCAGGAATGAGGCTTTCTGACTGTGGAAGGGCGGGAACCCATCCCTCAGAGGGAACTCCCCAGAATCCCTAATGGATTTAGATCCTGGTGGCTCCCCTCCTCTGAGTTTGACTGGAAGGGGATGTGACTGACCCCATTTTCAGGTGCTGGGCAATTATGGGGCTCTCTGGGGACTCTATCCCGCTCTCCCTTAGGGGTTTCTATCGTTCTTGGGTCTTGGTTTCTTCTGTCATTAAGCCTGAACCGTTTCTGGCCTTGCTATTTTGTATACCCGCCTTTTGGGAAACACAGCCGTACTGCTGGACTAATCCAAACACTTCCATGTGGCTACCTCAGGTGTCCCCAAGAGAGACACAGAGAAGGCCTCAGTGAGCCAGGGGCCCACAGAACAGCCGGGCAGGTGTTCCAGCCCATGGGAATGTGTCGCAGGGAGGCAAAGGCAGAAACCACAGTGCCTGGGATGTTCTAGGCTGCCAGCTACCAGTAGAGGAGAAGCGACAAGTCACAAAACTCTTTAATGCCAAAAAGAGAGAGAACGGGGCGGGGTGGTGGTTGGGGGATGGAGCGCAGCTGAGAGGCCATCCAGCAGAATCTCTGTTACGTTAGATGGGGAAAGCAAAGCACAGAGAGGGCAGGCTCTAGGCCCAACAGCACACAGCAAGATTCCTCCCTGCCTCTTTTCATTTCCTGCCCCCTCTCATCCTCATCTTCCTTCTGATGCTTGAGTGGGTCACCTGGGGTCATGCCTCAGGACCTTTATAGTTTCCGTTATTTCTGCCCAGAATGCTCTGCTCCCAGATCTACTTGCCAATCAGATCTCAGCACAAATGTCCCCTCAAGAGGGACCTTTCCTGACCATTATAACCGAAGTAGCTCACACCCAACCCTTATTTTCATCTCCACTGAGTTTTTTTTTTTTTTCTTGCAGCAATTATGATTTTAGAAAATTATTTATTTACCTGTGTATTGGCTGTTATCCCTGTGCGGTACCCTCAGCCCCTCAAATAGTGCCTGACATACAGAAGGTGCTTAGTAAATATTTAATTCATTAATCAGTGGCAGAACTAGGGCTGGGATTTAGGTCGTCAGCCTCTTGCCCCGAGGCAGGGAAAAGGTGGGAGATGGAGGAGGAACAAGCATCTCCTAGGAGAGGAGACACCTGTCGGAGGTCAGGGGGCCCGGGCAGCCAGCACGGCTTTGCCATGTCATTCTGGGTGACCGGAGCCAGTGCCTTGTGTTCCCACCCGTGAAATGAAAGGGCTGGAGAATGAGCATAAACACTTTCGAGACCCTATTTCCTTTGACAGCTGAAGATAAGCGTAACCAGTCTGAGGGGCAGGTAGCTAAGGGGTGGTACCCCCAGGTCTCACTAGAATTCCCACCACTGGCACAATTTGTCCCATCGAAGTTGAGGTAGCCCAGATAGGGGGAAGCACTTCGCACTATACTGAATGGCTCCAGGCACTGTCCTCAAAGCTCTTTCGGCCTTAGGAAAATGTTCCTCATCCATCTCTATGATACCCAGCACAACACTGTCTCCCCACTTCAACTGTGGTTCAAGCCTCTGCATCAAGCCTGCATGCCATGGGCAGAAACAGGAACACACAGAACAGCTAGTCCAGTAGAAACAGAACATCAGCCACATGTTTCGTCACTCAGTTGTGTCTGACTCTGCAACCCCAGGGACTGCGGCCAACCAGGCCCTTCTGTCCGTGGAATTTTCCAGACAAGAATATTGGAGTGGGTCTCCGTTTCCTTCTCCAGGGGATCTTCCGGACCCAGGAATTGAACCTGCATCTCATGCATTGGCAGGTAGGTTCTTGGCCCCTAAGCCACCTGGGAAGCTCATGAGCCACACAAGTAGCTTCAAGTATTCTAGTAGCCACATTGAAAAAGGAAAAGGGAACAGATACAGATGACACCAATTCTAACGTCTCACATCAATATATCCAAAATATTTCAACATTAATCAATATAGGAAAGAACTTTTTTATGCTACGTCTTTGAAATCTCGGGTGTATTTCTGTAGCACATCTCAATTCACATGATGAATTTTCATCAGAAATACTCGACCTCTATTTAGATTTCATGAAACTTACATTTGAAGAAGTCGTTTCCTATACCCACGCTGTCCCAGTGATGTTGAATAGTTTTCCAATAATGAAGATGAGAAGCATTTTCTAAATTAATGAGAAGTAAGTTGCAGGTAAACTTTTCCCCTGGTTCACCACAAACATGGTGAGTAGACACAGCACTGGAGAAAAAAAACAACCTTAGTATCACCAGGAATTCTGTCTGCATTGCCCGAGGGCCAGACAGCCCTTTGACTATAAGGGTGGCCTTTTGCAAGTGAGTCAGCAAGTGGAATCTACCCGCAGGGTTGTCCTGAGCATTCCACGCAGACACGTTTGTACCCTGTTCTCTCTTGTGTACAGTAATAGGCTTGCAGCCCCTCCTGGAAGCCCTCAAACATTAGTCTCATCCCCGTGCCTTTGCTCAGGGTGCCACCTCTCTGACACCATCTCTGACTTGGCCCTGTCTGACATCTCTACCCTATGCTTCTCTGCCCTCCCGCCAAGGGGACTCCTGCCTAAGATTGAGAAAGCAAGACCCAGTTTTGTTTTCTTGTGTCACTGTCCCTCGTAGAGTGTGCTGATTGTGTTTAAGTAGTTGTATTTTGGCACCCTTGGGGGTCAACGACTGTCTTTTGGGAGTGGTTGCCTTTTAAATCATGACTTCTAAAGGGATTGAACTTTAGGCTCTGGAAGCAGTAAGCTGCCAGCGAGGCATCGGTCTCTGGGCGCATCCAAACAGAAAAGACTGAAGACTCACTTGTGGAGGGACAACTGGCTGCCTTCAGGGTGAGCCTACATGGCATCTGCAGGCTGGAAGGCCCTTGAAGGCAGAAATTCTAGGAAACCTTTGATGAATCTTGGTGTTGCCATTGCCAGAAGCAGAGGAGGAACAGAGCCTCATCAACTTAGATGAATTTCCTACTTGTCTGGATAATGATAGACTTGTGTCATTGAGATGAGGAACCATGAAGCCGGGAGACTCAAGGGTGGGTTGACCTGTGTGTGGTGCTTTTTGGAGGAGTGAATAAAAAAGTAGAAATTCCA EMBV3_05053 AGAAACCCCCGGGACGGGCAGCCTCTGAATGCAAGGTGTGCAAAAAAGAGCTTTCCTTAT Gene GeneID:528359|LOC528359:XM_002707887:370_cdna Constitutive 0 NULL GeneID:528359 18 GENE LOC528359 NULL similar to zinc finger protein 371 EMBV3_32376 CTCACCCACCAAAGATGAATGGGAACAAGAAGTGGCCACCTGTCAGGGTCTGATGAGGAA Gene GeneID:785924|ROR2:NM_001105464:114_cdna Constitutive 0 NULL GeneID:785924 8 GENE ROR2 MGC159621 receptor tyrosine kinase-like orphan receptor 2 EMBV3_08692 TTACACTACTTCACAGAGCCCCATCACTTCCCAGAGCGTCTAGGTTCCAAGTCAGGCTAA Gene GeneID:513597|MYOF:XM_002698385:267_cdna Constitutive 0 NULL GeneID:513597 26 GENE MYOF FER1L3 myoferlin EMBV3_37220 GGACATGGATTTCCCCGGTTTGGATAACAACTGTGGCTGGAAACAAGGCTCTTCAGAGGA Gene BVV0102_207894 - 0 NULL GK000013.2:14647380-15208163 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33669 TGTGTGATTGTTTCAGCGACTGCGGTGTCTGGATCCATTTGTGACGACTTCATGGTGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08278 CTGGATTTGTCAAGGTGTTGTTCCTTCATCTACAGACAATGACCTCTGAATTGATCACAG Gene GeneID:100294723|LOC100294723:XM_002687837:175_cdna Constitutive 0 NULL GeneID:100294723 5 GENE LOC100294723 NULL similar to killer cell lectin-like receptor subfamily F, member 1 EMBV3_09839 CCCTAGTGCTTTCAATCCTCCTACCTCCAAACCCTATTCCAATAAAAAAGTGAAAGCCTG Gene GeneID:519474|TERF1:NM_001076865:31_cdna UTR3_Alt 5 NULL GeneID:519474 14 GENE TERF1 NULL telomeric repeat binding factor (NIMA-interacting) 1 EMBV3_14098 CCCAGGTGATTGCTCCCGAGGAGATCGTGGACCCCAACGTGGATGAACATTCGGTCATGA Gene BVT0102_256846 - 0 NULL GK000004.2:93598331-93619559 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182360 TCONS_00182357 TCONS_00182358 TCONS_00182361 1 XLOC_110841 Coding TCONS_00182361 XLOC_110841 Coding Coding FLNC 4:93609407-93637331 j TSS136282 8136 1 TCONS_00182361_14 2421 41 0.710095620098127 1.80667406281235e-30 1.89980068758097e-17 9.31704274029991e-85 4.02600921064492e-73 1.24587631867584e-83 2.43065296932085e-63 1.21468639720625e-94 1.35293189219243e-48 5.84296210108959e-61 4.22491389548077e-06 1.3766847511848e-05 1.44372206425149e-05 6.31156367315367e-104 1.08046428767177e-72 2.37211360524509e-06 0.00239810181832593 0.00299865181713264 0.0045319887571301 8.60507410106517e-55 3.48807135062341e-74 5.30443162450692e-250 1.28670690664404e-28 0.00190977059977589 0.00240190472047213 3.80710093146661e-190 4.15663229542819e-50 4.59156508348018e-155 1.62833151407829e-06 1.26801068234022e-21 5.2802635293854e-08 XM_005205705.1 FLNC PREDICTED: Bos taurus filamin C, gamma (FLNC), transcript variant 0.0 8893 100.00 0.605948869223205 NM_001458.4 FLNC Homo sapiens filamin C, gamma (FLNC), transcript variant 1, mRNA. 0.0 7014 91.56 0.605825958702065 TCONS_00182361_14 sp|Q14315|FLNC_HUMAN FLNC_HUMAN Filamin-C; 0.0 3479 74.22 0.999173895084676 0 coding 1 1 1 1 0.055614083451215 0.61386652062793 -0.0240341098471261 0.746862490674876 ATGATGAACAACAGCGGCTACTCCGAGGCCCCGGGCTTCGGCCTGGGCGACGAGGTGGACGACATGCCGTCCACGGAGAAGGACCTGGCCGAGGACGCGCCGTGGAAGAAGATCCAGCAGAACACTTTCACGCGCTGGTGCAACGAGCACCTCAAGTGCGTGGGCAAGCGCCTCACCGACCTGCAGCGCGACCTCAGCGACGGGCTGCGCCTCATCGCGCTGCTCGAGGTGCTCAGCCAGAAGCGCATGTACCGCAAGTTCCACCCGCGCCCCAACTTCCGCCAGATGAAGCTGGAGAACGTGTCCGTGGCCCTCGAGTTCCTCGAACGCGAGCACATCAAGCTGGTGTCCATCGACAGCAAGGCCATCGTGGATGGGAACCTGAAGCTGATCCTGGGGCTCATCTGGACCCTGATCCTACACTACTCCATCTCTATGCCCATGTGGGAGGATGAGGACGACGAGGATGCCCGCAAGCAGACACCCAAGCAGCGTCTACTCGGCTGGATCCAGAACAAGGTGCCCCAGCTGCCCATCACCAACTTCAACCGGGACTGGCAGGACGGCAAAGCTCTGGGCGCCCTGGTGGACAACTGTGCCCCTGGCCTCTGCCCTGACTGGGAGGCCTGGGATCCCAACCAGCCTGTGGAGAACGCCCGGGAGGCCATGCAGCAGGCGGACGACTGGCTCGGGGTGCCCCAGGTGATTGCTCCCGAGGAGATCGTGGACCCCAACGTGGATGAACATTCGGTCATGACCTACCTGTCCCAGTTCCCCAAGGCCAAACTCAAACCTGGTGCCCCCGTTCGCTCCAAGCAACTGAACCCCAAGAAGGCCATCGCCTATGGGCCTGGGATCGAGCCCCAGGGTAACACCGTGCTGCAGCCTGCCCACTTCACCGTGCAGACAGTGGACGCTGGGATAGGCGAGGTTCTGGTCTACATCGAGGATCCTGAGGGCCACACCGAGGAGGCCAAGGTGGTTCCCAACAATGACAAGAACCGCACCTACGCTGTCTCCTACGTGCCCAAGGTCGCCGGCTTGCACAAGGTGACCGTGCTCTTTGCTGGTCAGAACATCGAACGCAGCCCCTTTGAGGTGAACGTGGGCATGGCCCTGGGAGATGCTAACAAGGTGTCAGCCCGTGGTCCCGGCCTGGAGCCCGTGGGCAATGTGGCCAACAAACCCACGTACTTTGACATCTACACCGCAGGGGCCGGCACTGGGGATGTTGCCGTGGTGATCGTGGACCCGCAGGGCCGGCGGGACACTGTGGAGGTGGCCCTGGAGGACAAGGGTGACAGCACGTTCCGCTGCACGTACAGGCCTGTGATGGAGGGACCCCACACAGTGCACGTGGCCTTCGCCGGAGCCCCCATCACCCGCAGTCCTTTCCCCGTCCACGTGGCAGAAGCCTGTAACCCCAACGCCTGCCGGGCCTCTGGGCGGGGCCTGCAGCCCAAGGGTGTGCGTGTCAAAGAAGTGGCTGACTTCAAGGTGTTCACCAAGGGTGCTGGCAGTGGGGAGCTGAAGGTCACAGTCAAGGGACCAAGAGGCACAGAGGAGCCGGTGAAGGTGCGGGAGGCCGGGGATGGCGTGTTCGAGTGTGAGTACTACCCCGTGGTACCCGGGAAGTACGTGGTGACCATCACATGGGGCGGCTACGCCATTCCCCGCAGCCCCTTTGAGGTGCAGGTGAGCCCAGAGGCAGGCATACAGAAGGTCCGGGCCTGGGGTCCCGGTTTGGAAACTGGCCAGGTGGGCAAGTCAGCCGACTTTGTGGTGGAGGCCATTGGCACAGAGGTGGGGACACTGGGCTTCTCCATTGAGGGGCCTTCGCAGGCCAAGATCGAGTGTGATGACAAGGGAGACGGCTCCTGCGACGTGCGATACTGGCCCACGGAGCCCGGGGAGTATGCGGTGCACGTGATCTGTGACGACGAGGACATCCGAGACTCACCCTTCATCGCTCACATCCAGCCAGCTCCACCCGACTGCTTCCCGGACAAGGTGAAGGCCTTTGGGCCCGGCCTGGAGCCCACCGGCTGCATTGTGGACAAGCCAGCGGAATTCACCATCGATGCCCGGGCTGCTGGCAAGGGAGACCTGAAGCTCTACGCCCAGGACGCCGACGGCTGCCCCATCGACATCAAGGTCATCCCCAATGGCGACGGCACCTTCCGCTGCTCCTACGTCCCCACCAAGCCCATTAAGCACACCATCATCGTCTCCTGGGGAGGCGTCAACGTGCCCAAGAGCCCCTTCCGGGTAAATGTGGGAGAGGGCAGCCACCCCGAGCGGGTGAAGGTGTATGGCCCCGGCGTGGAGAAGACAGGCCTCAAGGCTAATGAGCCCACCTACTTCACAGTGGACTGCAGCGAGGCAGGGCAAGGCGATGTGAGCATTGGCATCAAGTGCGCCCCCGGCGTGGTGGGCCCCGCAGAGGCTGACATCGACTTTGACATCATCAAGAATGACAACGACACCTTCACAGTCAAGTACACACCTCCGGGGGCGGGCCGCTACACCATCATGGTGCTGTTTGCCAACCAGGAGATCCCCGCCAGCCCCTTCCACATCAAGGTGGACCCATCCCACGATGCCAGCAAGGTCAAGGCAGAGGGCCCTGGGCTGAACCGCACAGGTGTGGAAGTTGGGAAGCCCACTCACTTCACCGTGCTGACCAAGGGAGCTGGCAAGGCCAAGCTGGACGTGCACTTTGCTGGGGCCGCCAAGGGCGAAGCCGTGCGAGACTTCGAGATCATCGACAACCACGACTACTCCTACACCGTCAAGTACACGGCCGTGCAGCAGGGCAACATGGCAGTGACAGTGACCTATGGTGGCGACCCTGTCCCCAAGAGCCCCTTTGTGGTGAACGTGGCACCGCCTCTGGACCTCAGCAAGGTCAAGGTTCAAGGCCTCAACAGCAAGGTGGCTGTAGGGCAGGAACAGGCATTTTCTGTGAACACACGAGGGGCTGGCGGTCAGGGCCAGCTGGACGTGCGGATGACCTCACCCTCCCGACGACCCATCCCCTGCAAGCTGGAGCCTGGCGGTGGAGCTGAGACCCAGGCAGTGCGCTACATGCCCCCTGAGGAGGGGCCCTACAAGGTGGACATCACCTATGATGGTCACCCGGTGCCTGGCAGCCCCTTCGCCGTGGAGGGCGTCCTGCCCCCTGACCCCTCCAAGGTCTGTGCTTATGGCCCTGGTCTCAAGGGCGGGCTGGTAGGTACGCCAGCACCCTTCTCCATCGACACCAAGGGAGCGGGCACCGGTGGCCTGGGGTTGACCGTGGAGGGCCCCTGCGAGGCCAAGATTGAGTGCCAGGACAATGGGGATGGATCCTGTGCCGTCAGCTACCTGCCCACAGAGCCGGGCGAGTACACCATCAACATCCTGTTTGCCGAAGCCCACATCCCCGGCTCTCCCTTCAAGGCTACCATCCGGCCTGTGTTTGACCCAAGCAAGGTGCGGGCCAGCGGGCCAGGCCTGGAGCGCGGCAAGGCTGGGGAGGCGGCCACCTTCACTGTGGACTGCTCAGAGGCAGGCGAGGCCGAGCTGACCATTGAGATCCTGTCGGACGCCGGCGTCAAGGCCGAGGTACTGATCCACAACAACGCGGACGGCACCTACCACATCACCTACAGCCCCGCCTTCCCCGGCACCTACACCATTACCATCAAGTACGGCGGGCACCCCGTACCCAAGTTCCCCACCCGCGTCCATGTGCAGCCCGCAGTCGACACCAGTGGGGTCAAGGTCTCAGGGCCTGGTGTGGAGCCGCACGGTGTCCTGCGTGAAGTGACCACTGAGTTCACTGTGGACGCGAGATCCCTGACAGCCACGGGTGGGAACCACGTGACGGCTCGCGTGCTCAACCCCTCGGGCGCTAAGACGGACACCTACGTGACCGACAACGGGGACGGCACCTACCGCGTGCAGTACACGGCCTACGAAGAGGGAGCGCACTTGGTGGAGGTGCTGTACGATGACGTGGCCGTGCCCAAGAGCCCCTTCCGTGTGGGCGTGACTGAGGGCTGTGACCCCACCCGTGTCCGGGCCTTTGGGCCGGGCCTGGAGGGGGGCTTGGTCAACAAGGCTAACCGCTTCACCGTGGAAACCAGGGGAGCTGGCACCGGGGGCCTAGGCCTAGCCATCGAGGGCCCGTCGGAAGCCAAGATGTCTTGCAAGGACAACAAGGATGGGAGCTGCACCGTGGAGTACATCCCCTTCACCCCCGGCGACTACGACGTCAACATCACCTTCGGGGGCCGGCCCATTCCAGGGAGTCCATTCCGGGTGCCAGTGAAGGACGTGGTGGACCCCGGAAAGGTCAAGTGCTCAGGCCCAGGGCTGGGAGCCGGCGTCAGGGCCCGGGTACCCCAGACCTTCACAGTGGACTGCAGCCAAGCTGGCCGGGCGCCCCTGCAGGTGGCCGTGCTGGGCCCCACAGGTGTGGCCGAGCCTGTGGAGGTGCGTGACAATGGGGATGGCACCCACACCGTCCACTATACCCCAGCCACGGACGGGCCCTACACAGTAGCCGTCAAGTACGCCGACCAGGAGGTACCACGCAGCCCCTTCAAGATCAAGGTGCTTCCAGCCCACGATGCCAGCAAGGTGCGGGCCAGCGGCCCTGGCCTCAACGCCTCTGGCATCCCGGCCAGCCTGCCCGTGGAGTTCACCATCGATGCCCGGGATGCTGGGGAGGGCTTGCTCACTGTCCAGATCCTGGACCCTGAGGGTAAGCCCAAGAAGGCCAACATCCGAGACAACGGGGACGGCACATACACCGTGTCCTACCTCCCGGACATGAGCGGCCGGTACACCATCACCATCAAGTACGGCGGCGACGAGATCCCCTACTCGCCCTTCCGCATCCATGCCCTGCCCACTGGGGACGCCAGCAAGTGCCTGGTCACAGGCGATGACTCAATGAGGACGTCACAGCTGAATGTGGGCACCTCCACGGATGTGTCCCTGAAGATCACCGAGAGTGACCTGAGCCAGCTGACCGCCAGCATCCGTGCCCCCTCGGGCAACGAGGAGCCCTGTCTGCTGAAGCGTCTGCCCAACCGGCACATCGGCATCTCCTTTACCCCCAAAGAAGTTGGGGAGCATGTGGTGAGCGTGCGCAAGAGTGGCAAGCATGTCACCAACAGCCCCTTCAAGATCCTGGTGGGACCATCTGAGATTGGGGATGCTAGCAAGGTGCGGGTCTGGGGCAAGGGCCTGTCGGAAGGACACACGTTCCAGGTGGCGGAGTTCATCGTGGACACTCGTAATGCAGGTTATGGGGGCCTGGGGCTGAGTATTGAAGGCCCTAGTAAGGTGGACATCAACTGTGAGGACATGGAGGATGGCACGTGCAAAGTTACCTACTGCCCCACCGAACCCGGCACCTACATCATCAACATCAAGTTCGCTGACAAGCACGTGCCTGGAAGCCCCTTCACAGTGAAGGTCACTGGCGAGGGCCGCATGAAGGAAAGCATCACCCGGCGCAGGCAGGCGCCATCCATCGCCACCATCGGCAGCACCTGTGACCTCAACCTCAAGATCCCAGGGAACTGGTTCCAGATGGTGTCCGCCCAGGAGCGCCTGACACGCACCTTTACCCGCAGCAGCCACACATACACCCGCACGGAGCGCACGGAGATCAGCAAGACACGGGGCGGGGAGACCAAGCGCGAGGTGCGGGTGGAGGAGTCCACCCAGGTTGGCGGAGACCCCTTCCCCGCCGTCTTCGGGGACTTCCTGGGCCGGGAGCGCCTGGGCTCTTTTGGCAGCATCACCCGGCAGCAGGAGGGTGAGGCCAGCTCTCAGGACATGACCGCACAGGTGACCAGCCCGTCGGGCAAGACGGAAGCTGCTGAGATCGTGGAGGGGGAGGACAGTGCATACAGCGTCCGCTTTGTGCCCCAGGAGATGGGGCCCCACACGGTCACTGTCAAGTACCGTGGCCAGCATGTGCCAGGCAGCCCCTTTCAGTTCACCGTGGGGCCGCTGGGTGAAGGTGGTGCCCACAAGGTGCGGGCTGGAGGCACGGGGCTGGAGCGAGGGGTGGCTGGCGTGCCAGCCGAGTTCAGCATCTGGACCCGAGAAGCAGGTGCCGGGGGCCTATCGATCGCCGTGGAGGGTCCCAGCAAGGCGGAAATTGCATTTGAGGACCGCAAGGACGGCTCGTGTGGGGTCTCCTATGTTGTCCAGGAGCCAGGTGACTATGAGGTCTCCATCAAGTTCAACGACGAGCACATCCCAGACAGCCCTTTCGTGGTACCCGTGGCCTCCCTCTCAGATGATGCTCGCCGTCTCACTGTCACCAGCCTCCAGGAGACCGGGCTCAAGGTGAACCAGCCGGCGTCCTTTGCGGTGCAGCTGAACGGTGCACGGGGCGTGATCGACGCTAGGGTGCACACGCCCTCGGGCGCCGTGGAAGAGTGCTACGTCTCCGAGCTGGACAGTGACAAGCACACCATCCGTTTCATCCCCCATGAGAATGGCGTCCACTCCATCGACGTCAAGTTCAACGGTGCCCACATCCCTGGCAGTCCCTTCAAGATCCGAGTTGGGGAGCAGAGCCAGGCTGGGGACCCAGGCTTGGTGTCGGCCTATGGTCCTGGGCTCGAGGGAGGCACTACAGGCGTGTCGTCGGAGTTCATCGTCAACACCCTGAATGCAGGCTCAGGGGCCTTGTCTGTCACCATCGACGGCCCCTCCAAGGTGCAGCTGGACTGTCGGGAGTGTCCCGAGGGTCACGTGGTCACTTATACTCCCATGGCTCCTGGCAACTACCTCATTGCCATCAAGTATGGTGGCCCCCAGCACATCGTGGGCAGCCCCTTCAAGGCTAAAGTCACAGGTCCCCGGCTCTCTGGAGGCCACAGCCTTCATGAAACATCCACGGTTCTGGTGGAGACTGTGACCAAGTCGTCCTCAAGCCGGGGTTCCAGCTACAGCTCCATCCCCAAGTTCTCCTCAGACGCCAGCAAGGTGGTGACACGGGGCCCCGGGCTGTCCCAGGCCTTTGTGGGCCAGAAGAACTCCTTCACTGTGGACTGCAGCAAAGCAGGCACCAATATGATGATGGTGGGCGTGCACGGGCCCAAGACCCCCTGTGAGGAGGTGTACGTGAAGCACATGGGGAACCGGGTGTACAACGTCACCTACACCGTCAAGGAAAAAGGGGACTACATCCTCATCGTCAAGTGGGGCGACGAAAGTGTCCCCGGAAGCCCCTTCAAAGTCAATGTGCCCTGAATCCCAGAAGTGCCTCCCCCAGCCTCGGCCCCCACCTCTGGCCAAACACACTCACACACACACACACACACACACACACACACACACAGGCCACACCCAGATGCACGCTCGCAGAATCAGACACCACAAACACCTGCCCTGGGGTGTGGACGGAGTGGCACTGCCCCCTCGCCGCCAGGCCCTCTGGCTGGAGGGCCTTGCCTGTTTCAGGGCAGTGTCCCTCGCCTCAAATGTGACCTGAGGGTGAACTGGGGGTTGGGGGGCCAGGGAAGCCCTGTGTTTTCTGGTGGGGCTGAGGCCAGTGGAGGAGCATGTGTTTGGGGGTGTCTGCATGTGTGAGAGAGGTCACCCTCAAATCGCACTGCCAGCCAGCCCTCCTAGCCGCTGAGGACTGCGTCCAGCCCCTCTGGTGGCCACAACCCCAGAGCGTTACGGCTTGGAAAACGAAGCACAGTCAGAGGAGAAAGTGTACCTAGCGGCAGCTGCACACATGTCCTGGCCCCAGGCGATTGAGACCCCAGCCAGGCTTCCTGGGGGACTGATTTCTTTTTTTTTTTTTTTAATAATTGCACAGCTCTGCCCCATGGGGGGGCCTTTTTTACACACTGCGAGGCCCAGCTTTCTGGGGGGCTTTTGCACATGTCATGCGGCTCAGCTGGGAGCCGTTTAGGCGGAAAACTCCAAATAAAGTGCGGCCTGTCGCAGAGGCGTGGTTGTGCCTTGTGTGTGTGCGCTTTCCTTGGCTGGCCAGCTCTGGCTGTTGACCCTCAACCAGGCCTTGGGAGGCAGAGGCTGGCTGCCTGTCCCCTCGAGGACCGAGTCAGGTCCAGGGGAAGGGCCTGGGGCAGAGAGGCACCCCTCTGGGCCATC EMBV3_22438 CACACAGGCGCTGGAACGACCACCAGGGCCGGGGCTTTGGAGAGAAAGAATCCAGTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12940 TTTCCCAACCCTGGGATCTCCTTCAAAAAGTAGGCCAGTGAGGCTTTGGGCAAACGATTC Gene BVV0102_111357 + 0 NULL GK000017.2:55054936-55100506 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14835 CTGGAGGGCTCATTCTTGTGATCCCCTTTCTACTCATCATCACGTCCTATGCTCGAATCG Gene GeneID:526294|LOC526294:XM_002695697:279_cdna Constitutive 0 NULL GeneID:526294 19 GENE LOC526294 NULL similar to olfactory receptor Olr1466 EMBV3_21993 AGCTGTTGTCAAGCTGACATGAGAAGGTTCTTTGTTGGCCCAGGCTGTCCACGAAAGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41406 TGCGGATACTTCCACAGGTCCCAGAACCGCTGTGAGCAGTTTCTGATAGCTCGACAATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25901 ACCCTATGCATTTTCCCATCTGTGGGTCAAGGGAGATCCACCATTTCTTCTGTGAGGTCC Gene GeneID:788709|LOC788709:XM_002689156:169_cdna Constitutive 0 NULL GeneID:788709 7 GENE LOC788709 NULL similar to olfactory receptor Olr1415 EMBV3_15972 ATGGAGGACAAGTGGTCAAAGAAGAAGGCAGAGTGGGAGAAGGATGAGAAGTTGGAACGG Gene GeneID:784225|ALS2CR12:NM_001105461:152_cdna Constitutive 0 NULL GeneID:784225 2 GENE ALS2CR12 MGC142941 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 EMBV3_40420 CATTGCCACCCCCACCACTAAGGTGCTAGGAAGTCGTCATCACCCCATCCTCAGAAGAAA Gene GeneID:523755|ITGA11:XM_002690525:544_cdna Constitutive 0 NULL GeneID:523755 10 GENE ITGA11 NULL integrin, alpha 11 EMBV3_16621 TCCTGGCTCACCTGCGGTATGGATTACTAGTTTAGAACTTGTGGTTGAGCCATGGATTAA Variant GeneID:507991|MTRR:NM_001030299:8_cdna 295^412 1 EMBV3_36395 GeneID:507991 20 GENE MTRR NULL 5-methyltetrahydrofolate-homocysteine methyltransferase reductase EMBV3_34067 TTTGCTGTGTCATGATGCTGCTGATCCCCTTCTCTGTAGTGATTGCTTCCTACGCTGGAG Gene GeneID:511141|LOC511141:XM_002689120:84_cdna Constitutive 0 NULL GeneID:511141 7 GENE LOC511141 NULL similar to olfactory receptor 720 EMBV3_30169 ATCCAGGACACACTGCACTGCGTCAAGCCATCCCTGCTGTCTCACGTGGAACAGCTGCTC Variant GeneID:506605|MAD2L2:NM_001045946:37_cdna 346^465 6 EMBV3_06306 GeneID:506605 16 GENE MAD2L2 MGC137331 MAD2 mitotic arrest deficient-like 2 (yeast) EMBV3_09263 ACAGAAAGGCGTAACTGTAGAAAGAGGGAAAAAAGACAAGCAGCAGCCCAGGAAAGCCCC Gene GeneID:520504|CCDC36:XM_002697039:490_cdna Constitutive 0 NULL GeneID:520504 22 GENE CCDC36 NULL coiled-coil domain containing 36 EMBV3_31628 TAGTGCTGATGAAGAAATAGCAAATCTGGGCAGAGAGAGTGGGGGAGGTTATCAGGCTGG Gene GeneID:530719|CAMK2A:NM_001075938:70_cdna Constitutive 0 NULL GeneID:530719 7 GENE CAMK2A MGC139375 MGC155201 calcium/calmodulin-dependent protein kinase II alpha EMBV3_06962 CGTCTGAAGGCATTTTTTGATTGTCTTAATTTCGGTGAGTGGGTGGGAGGTGCCTCTGGC Gene BVT0102_270356 - 1 EMBV3_28842 GK000001.2:84428659-84536352 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001406 TCONS_00001411 TCONS_00001410 TCONS_00001412 TCONS_00001413 1 XLOC_000354 Coding TCONS_00001412 XLOC_000354 NonCoding Coding MCF2L2 1:84513236-84528536 j TSS723 3480 1 TCONS_00001412_9 82 0.264655172413793 4 0.772795607556049 0.00106551355758888 0.000625485479395166 0.000319553787777397 0.000326247180741886 0.000460811916595739 3.89736958054972e-05 0.000172290342790022 0.000483864541135095 0.000523644274428305 0.000127337836236112 5.97122348249569e-07 0 0.000329133812813811 0.000114458369926953 0.00104897606965987 1.89422631284304e-05 0 0.00211195562233497 0.000818784154254296 0.00112202290548481 0.000384100741332037 3.60719077698072e-05 0 4.534636969688e-44 0.00091805864467765 0.000320718112982338 1.39520007867084e-08 0 1.66612048837339e-38 9.08246912247886e-13 XM_001790423.2 MCF2L2 PREDICTED: Bos taurus MCF.2 cell line derived transforming sequence-like 2 (MCF2L2), transcript variant X1, mRNA. 0.0 1631 99.89 0.260344827586207 NM_015078.3 MCF2L2 Homo sapiens MCF.2 cell line derived transforming sequence-like 2 (MCF2L2), mRNA. 7e-35 154 78.49 0.0505747126436782 0 noncoding 1 1 1 1 0.0339352773602614 0.850927222787037 0.0147040407494732 0.838806720967293 GCCTGTCCCTCCATGTAGCAGAATATCCAGAAGATGTTTATGAAGATGAAGACAATGGCAGACAAATATCCCTAAAACGTTGCTCAAGCAGGGAGTTTATCTCCATGGAAACCTCTGTCAATTGTGAAGGTGCAGAAGATTTGGAAAAGGAGAACAGTGTCCTGAGTCTCTCGGGACTTTTCCGGTTGGACGACAGTTACGAGACCTCCACGTCTGGTCAGGAGAAGGGAGAAAGCATTCGGGGAGAGAAAAAGGGCTGTCAAAAGAAGGACACGTGAGTGGAACGCGGAAAGAAAAGTAAGCCAATTTGTTAGCAGTTGCTCCTCTGACTTTCTTCTTGGAATTTCAGGGCCACGAACAAAACTGAGGAGAGCCTTGAGACGTCTACTGGCTTGCTCGCCCCTGCGGGGAAGGCCAGTTTCCCCCGAGCAGAGGCAGTGCGGGCAGAGGCAGTGCGGGCGCAAGAAGGAAGCCTGAGGCCGCCCTCTGCAGAGAACTGACACTCGTTCCAGACCACTGAGCATCCCCGGCCGATTGTATTCCGGGGAGCCGCTTCTGTGGGCGCGGAGCAGAAGCAGCAAAGGGATCTCACAGCCCACACACAGATCCGCTGTCCTGCCGGGGGCGACTGGACCATCTTCCCGGAGCCTGAGGAGCGGTCCACGTCTGCGCGGGGAGCCTCGGGCTGTTCTACGCGCCGCCTCGCGAGCGCAGGGACTCGGAGCAGACCCCTTGGAGAACCTGCAGATGCCGCCACGCGCCCGCGCTGGGACAGGGCGCAGAGTCCGTGGAAAACCTTGCGCCCTTCTAGACGCGCCTAGAGTGTGGACTCCGCGGAGAACCTCTAACTGCTCCACATGTGCGCCTACAGAGGTTAGGGATCCAGTCCTGGAGAGCTGAGTCCAGGGTTTCTGAATGTTGGCACTTTTGACTTTAGTATAACTGCTGTGGAGGCTCTCGGGCATTGTAGAATGTTTAGGGGCATCTCTGCCCTCTATCCCCTAGATGCCAGAGGCACCTCCCACCCACTCACCGAAATTAAGACAATCAAAAAATGCCTTCAGACGTTGCCAAATTTCTGCTGGGGCGGGAGTGGAGAGCTCGGTTGAGAACCTCTGATCGGAGCCGCTCAAACTCCACAGGGCAGCCCTGCGCTCTTCTCCCTGAATCCCCACAAGAATGTTAACTGTGATATTTGTGTTACTTTGTTCCAGGGTTGTTTCCTCTTAGTGAGGGCTGGCTACAAGTTAACTTCTGAGATATTTACGTTTAGATTTATTAGTTTTTAAGTTAGCTTCATTTATTTTCAGTAATTTATTTTTAGTTTAATTAGTTAATATTCATTTTTGTTTTTAGTTTTATCTTTATTTAATTTCATAGCTTTAAAGCTACCTGTTTATAGCTATTTGGTCTTACTTAGTTCCTTAGTTTTTGAGTTATTTTGTTACTCATTTACGGTTACTTTGTTTTGAGTTATGTATTTCCAAATTAGTTACCTTTAGAATTATTTATTTTAAATTATCTATCTTTGCAATTGTTAATATCTGAGTTATTTTCATGTTTTTATTTTTAATTGTTGGCAATTTGGGGATTATTTATTTTTACAGCTACTTATTTGAATAGTAAATATTCACTTGAAGTTTTTTAATTGCTTTATTTTCAGAATAAAATACCTGTAGTTATTTTAGGGCTTTTCCCCTAGATATTTAGTTTTAGAGTTACCTATATTCACAGTAATTTATTTTCATTTATTTTAGAGTCTGGGTTATTTTTACACTCATTTGGGGGTTTTTAGTTATTAATATGTGGTTTTAAATTATTTTCAGTTGTTGCATCTTGAGCATTATATTTTGAGCTTCTTACTTTCAGAACTTTTGAGATACTTAGTTTTTGAGTTATTTTCAGAGTTACTTATTCTCAGTCGTTTCTTTTCAGTCATGTCTTTGTCATTCAAGTTTTTTTCTATTTTGTATTTTTCATTATTTTGTTTTCAGTTTTATTTACAGAATTATTAGTATTTCTTTAGAATTATTTAATCCATCAGTCAGGATCCATTCAAGAGAAACACTATAGTATACTAGTTATTTTAACAGAAAGAATTTATTTTAACAGAAAGAATTTAATATAAGGAAGTACTATCCAGGTACTGAAAATTTCAATGGGGGAAAAACAGTGATAATCAGATATCATGAAGATTTTAACTTCTCTGCTGGCATCAGGAAAGACCAAGGAGTTATGAAGATGAGTGAGAGGTTCCTGGGTCCAGTTGGGGGAGTCAGATGTGGAAATAGGTGATCACAACACAGTGTGTGACACACAACTCTGCCGCTATGTGATGAGGCCGTGTTTGGAAGATGGTAAACTGCTGCTACTGCAAGGGAAATGCAATTTTGAAATTTTTAGACTTCTTAAAAACCAGAAAAATAATAGAGGCTGAATCTTCTGTGAATGAGATTTGTGTCATCTTTCTATTTGGGTAAATGAAAAGAACTAAAACCTTCAGGTAAATCCTTCAGCCTCCTTTTATGAATACTAGTTGCTCAATACCCATTCCAGTGTTCTTGCCTGGAGAATCCCAAGGATGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAAAGTCAGAAACCACTGAAGCAACTTAGCAGCAGCAGCAGTTGCTCAATTAATCATGTCCCCTGTTGCCCACTAGAGGTCTTCATTTCAGCAGGTTGCTTAGGAATGGGAATTCTGTAGCCCCAGTCAAAGTGCTCTGGTATAGGAACTGTAAAATCTGGCCAGAGTCTGTGTCCACAGTAAAGAACAACCAGGCATTATGAAATTATTAGAAAAGTTAGAGATATTCTAAACCAGCATTTCCCAGAGTGTATTTTGCAGAATAGGCAGAAGAATGTTAGAGTTCAATGAGTTAATCCCACAATGAAAAAGAATTATGTAAAAATAAATATACTTTACAAGTAGTACATATTACTGTCTTGGTTGATCCCAACTGGTAAATTAAAGGAGCTGAGAACTCTTTCAGGACCAAAGTCTGTATATTTTTGTTAAACTCATGATTTCCCAAACTTATTTGACCACAGAACCCTTTTCTTTGTGAAATATAACATCCAATATGTATTAGTAAAAGGAAAGACTTTGCTATAACAAAGAGATCCAACAATATATTGACTAAAGAATATTTCCGTCTGTGAAACAGCCTGAGTTGAGCTTGCAGTCTACTCTGCTTCACATGGTCATTTATTGTCCCAGGTTCCTCCTTTCTGGTTTTCTACCATCCCCTAGAGCATTGTCTTTGTCTACACAGTCAAAAGCAAATTTCAAGAATGTCCAGCTTCCATCCTGCAGGAAGGAAAAAGAACTTGGGAGATATATGTATAAGCAATGTTTTAAGGCCCAGCCTGCAAGTAGCACACAAAACATTTTCTTATATTCCCGTAGTGAAAGCTATGTTGAATGGCCACACCAAGCTCCAAAAGG EMBV3_41322 GCCTGAAACATCAAGTAGTTTGCCGAAGGGCACCAACTAATGACAAAGCCAGGCATGGAG Gene BVT0102_074121 + 0 NULL GK000005.2:71355737-71366682 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195489 1 XLOC_118065 Coding TCONS_00195489 XLOC_118065 NonCoding Coding C5H22orf28 5:71359398-71366780 o TSS145673 7382 3 TCONS_00195489_16 117 0.225684096450826 1 0 0.000126849441006981 0.000249014068538541 0.00032524475107048 5.16393873123917e-05 2.90333346145981e-09 7.10652588387103e-05 0.000256979209169637 1.61926794131703e-09 0.000208774454227128 4.42416857444012e-05 4.66644977201019e-05 6.48437789393274e-06 1.63754754559905e-10 9.7145094156379e-13 2.55732682599241e-09 0.00398508880566608 0.000653400922910386 0.0012021210584219 0.000507553582545531 0.000165379708028249 0.000201778862716675 0.00159404977699808 0.000979738848813266 0.00140861073436317 0.000127774416249214 1.24789184095439e-05 0.000130402289314832 0.000338201146397349 0.000141977692514227 0.000693694770781139 XM_005225576.1 CUTC PREDICTED: Bos taurus cutC copper transporter homolog (E. coli) (CUTC), transcript variant X1, mRNA. 2e-114 419 92.12 0.0392847466811162 0 noncoding 0 0 0 0 -0.078860537805577 0.501070239658539 -0.00373441139058522 0.946430496757596 TGACACCCGAAGTTGTTAAAGTTATAGGTTACTAAGGCCACAGCTGAGTCCAGACACTAAATAGAAAAATCTAATAAAGTTGTAGTATGTTGTTTATATTTCATGTTTAATGTTTCATAGCTTAGGATGGTTAGTATTTCTACTTGATTCACTTTGGTCAATGTTGCTGTTTTCTGATTTTCTTCTGGTTGCTTTCAGAGATGCACCTTAAAGATACTCTTTTCTAACACTTATCCCTCAACTTATAATAAAATCCCCCATTGGAGTATCTTCTAAATGCTAGCTAGAGAAAAGCAGACTTCCTCTGAAAAAATGTGACATGAAACAGCATGTCTTTACTTTGAGCATTCAGTAACGTAAATGGGTTTAGAGTTTGAAAGTTACCAATAAGTTAGTCATCTTAATGCAGTAATTGTATATTACTTGTGCCTCTGGGTTGGACCAGTGATCATTGTGCACAGATGAGTTAAGGATGCAGGTTACCTGTGGACACTGGAGGGCATTTGAGGATGAGAAACAGGCTTTGGGCAGGTGCTAGGTTCTCATCTCTAGAGATGAGGCAACAGTGAGTATCTGTGTGGACTCCCTCTAACTGGGCTTTCCCAGTGATGTCATTTAGCAAAGTCTGCTTCCAGAACTGTGATGTCAGTGCAGGAAATGCTGCCGATAATCCAAGATACATATGTTACATCCTCTTGGACACTTTGAAAGTCACTCGGGGCGGGGGGGTGGTGCTGCTGCTAAGTCACTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACAGCAGCCACCAGGCTCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCGATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCCGAGCCTCAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCATGACATTTTCCAGGCAAGAGTACTGAAGTGGGGTGCCATTGCCTTCTCCACTGGGGAGGGGAGAGGGGAGCAAATGAGGTAGAGAAATAGAAATGGTTTGTGCCATGGCATTTCTGTATTATAAGCTTTTCTTATATGTAGCATTTCTCCAAAGTTGGCCCTATTAATGACCTTGGGAAGTAATAGTTAATATTTTGAGTTCAAAAAGAAAACTACAAACATTGTTTTCCTTGTTCTAAAGATGTCATTTTCTCATTTCAGGCAAAAACCATTTTAAAATGAATGTTCAAACAAAGTTGAAGTAACCAGCTGTTTTTATTGCTCTAAATGTTCCCCATGCCTGGGCACATGGACACAGCTGGGAATGCACTTTGATAAGGGACTGTCTGGTTTCACCAGGCATGAAATGAGTCTTATTACTGTACACATCTTTTTCAGGCCTTTAAAGTCAGTAGGTTTATCAGTAATATTTTGAAAAGCACTGACATTCACACATTGATGATGGACTGTGTCATTCCTGTCATCAACATGTGTCTGCAAAAACCAATTTATTAGACATAAAATATGAACACTCACTAATTTTCTAATTTTGTGATATGTTTTGTGGAGCAACAAGGAACTGAAGATTCAAATATTGAAGTAAAACCTTGCAGATCTTAAGATGCTCCCATTTTGATCTTCATATAACCTTTAAAAGCTTACATACAAGATAACTTTTTTTTTTTTAGGTTTTCCTATTTTGTTCTTATTTTTTTTAAGTTACTTTCTCCTATTTCTGAAAATTGCTTTTAGCATCATCTGTATTGCTGAAATGTTTACAACTCCCTGTGCCTGATATTTCAATACACAACTCACATTACCCCTTCTGTCCTTACTTCTCATTTATGTCCTTATTTTTGCATCTGCTCCATTGCTTGACTACATAGGATTTTCACATTGTCCAGAGAGCATGATTTGGGTCCATCTGGATCAGCTGAGTATAAAGATGCTATTAATTATTAATCAGGCACCTTGGAGTGTGCCAAGTTATTAATAGTTTCTGATCTTTAAAGGCTTTGAAACTAATATCTGAAGTACCAGTGATCTGAAGATCACTGGTATTTGTTGTAAGGAGGACATATCATAGAGAAGTGAGTGGTGATTGAAGTTGTACCTTGCAGATAGACGTGTAGTAAATGAAAAAAATACCAAGCATATAGTAGGTGCTTTACACATTAAAAATCACCATTCCTGCTTTGCAGTGTAGCCAACGTTTTTACCTATGGTTTTAGTCTTTAATGAATGAGGGAGGGCTAGGCAGGATTGATGCCCTTACGCAGCCTTGAAGCAATTTCAGAAGACTGACCTTCTTCCCTCTGCTTCCCATTAGAATATGGGAGTAAAATCTCTGAGGAGGGAATGAAACTCTAGGGAAGAGGGCATTCCCCTTTAAACAACCATTAAAAGAATGACAGCCATCAGTTCAGTTCAGTTCAGCCTGTCAGTCGTGTCCAACTCTTTGCAACCCCATGAATTGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCTGGAGTTCACTCAAATTCATGTCCATCGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCTCCCAATCCCTCCCGGCATCAGGGTCTTTCCCAATGAGTCAACTCTTCGCATGAGGTGGCAGAGTATTGGAGTTTCAGCTTTAGCATCAGTCCTTCCAGTGAACACCCAGGACTGATCAGATGTGACAAAAACTGGTTAGAACCAACTATCAACTAGATCCAAGATGGCAAAAGATTCAACTTCCAGTGGGCCTTGAGCCTCCATATATGCTTATTGTAATACATTAGCATATGCAAAATGACACCTACCAGTGCCATGACAGTTCCAGGACCAACCACCGAAAGGCCAAAAGGTGGGCAGTGGCCCAATTCCTGGACATCGCCGCCTCTTCCCCATAATAATTGGGATAATCCTCCCACTCATTAGCCTGTGAAATTACCCAGCCTGTGAAAACTAACCATTCCATATTTCAGGGCCTCTTGGCTTTTCAATTGGACTGTATTCTGTCTATGGAATGTGCATCTCTCTAAATTTGTTTGTTACCTATAAATAAACAAGCAAGCCAACAAACAAATGAGGGAGGGTGGGAGAAAGGATTATGTGAGCCATTCACTTGAATTTAATTAGGTTTGCATGGTAGGTATCCCTTCATTACAAATTGGAATGTAGCCTGAAACATCAAGTAGTTTGCCGAAGGGCACCAACTAATGACAAAGCCAGGCATGGAGAACCAGGTATTTTGACTCCCAAGTTTAATTTTCTTGCTTTGACTGCTCCAAATGGCTGTTCTGATTGAGACTTGTCTAGTCATTTGAATCCGCATAGGGCTACTTTAGAATAGTAAAAGGAGAAGAGATGTTGGTTGAAAATCAGAGTGAAAAGTCATTGAATTACAAAAATCCTTGCTTTATTTTTCTTGGCCATTATTGCCACCTGAAAACATTTATGCTTGTTTATTGACTCTTCCTAAAGTTAAGCTCCGTGTAGGCAACTAGTAAATATTTTCTGATTGAATGGATGGATGTACAGATGGATGGATGAAGACCATCCATAGACGGTTTACTACCACTGATCTGTGTGATACATTAACTCTCTAAATTTTAGTTCTTCGTCTGTAAAATGAAAGCGGCATGTAATACGTGCTTCGTTGGATGGTTATAAAGATCAAATGAGAATAATACATAGAAAGGCCAACCTGCTATCAGGTAGGCCCTCAGGAAATGTCAGCTGACGGAGAATTTCTGTTACTAGAGGTCCTTTAAGAGAGAACAGGTATGCTTTTGCCCTGCATGGGTTAATCCTTCATTTCACTAAAACTCCTGGGGTTGAATCAGGTCATTTCCCAAGGCCCTTTCTAGTCCTGAGATTCTGAGATCTGATTCCTTTTTCAGAGGTGTTTCTACTGTTGGGGATATAAGAAATGTCTTCAGTGCCCCCCTCAAGGCTCGCTTTGCAGGCAAAAACCAGTTTGATTGTCTGGACACACTTCATCTGCCACTTTTTAAGTTCCATTTTGACCATGGTTAATGACAGTGAATAACCCAACAAGAAAAGGCTGCTGACAGGTTTTCGGCAAAGGACGCAGCTAAATAGCTACAAACAGATTAAAAATCATTCTCACCACCCAGAGAGCCTGTGCATAAAAACAAACACAACTCATCGATGATGATCAAAGAGCTGGGAATGGTTCTGCAGTTTCATGGACTAATAAAGCAGCGTCAGGCCCTCTGCCCTCTCCCAGAAGCCTGTCTGCATGATGGACATGAAAGGCTGGCAATGACTGAAAGCGAAGGGTCACCAAATGATCATTCTGTGAAGGATTCCACTGATGGACGTTTCCATCGAAAGTCTCATTCCCAAGGTGACAAGTGGGATTGTTACCCATTTTGGGAGAAGACAATGATAACTTTGGGAGCTTTGAAGAAAACCTTTGTCTAGACAAACAGCTTGGAAAGCTTGTGAAATGCACCATCTGAAACGTGGCTGACTTGGTTATAGCTAGGTAATGCTGACTCATCCTATGAAATACCTTCCCCGACCTGATGGGACTTTGGTCTCAAATTCAATTAAGGTTTATAGCACTTGGAGTCAGAGGATGAGTGTTAAGTTCAAGTGTCCTGAGTTGAAGGTATGTTGTTTGGTTGCTAAGTCATGCCTGACTTGCAGCCCCATGGACTGAAGCCCACCAGACTCTTCTGTTCATGGTGTTTCTCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGAGATCTTTCTGACCCAAGGATCGAACCCCCATCTGCATTCTCCTGCATTGCAGGTAGATTCTTTTTTACCACTGAGGCACCAGGGAAGCCCTTTGAAGTTATGTTACCCACAGATCAGAAATGGCTAGGCCAAAGAAGCAGACAACATCTCTCCAAATCTAAACAGCCCAAGGGCATCTCAATTCTACTCCCCTCCAAACCCTGTTCATTTTTCCTAAGTTATTTTTTCTTCCCTATGTCCAGACATTTCCACAAAGGGAAGAAAATAACGACTGTTTTTTTCTTTCTCACTAACCCTTGATACATTGCATCTCCTTTATACCGGTTCCGTAGAAGTTAGTCTCTCTGAGAATTTTATTTTTAGCCCTAGAAGCTACAGAGAAAAAATAAATTATTGAGCATCTGTTATTTGCTGCCTGACTCAGGCAAGGTGTGTTGTGTATATTATCATTATCTCATATAATAAACACTGGTGAACTTTCATAGTTAATTATAATCACAAAATTATAAAATATTAAATACAAATATCATTTAAGTTTCTGTATCATCACAGGAGTTTGTGCAACTTTTTAACGAAGTCATTAAAAACTGAATTCCATGCTTTTGAAGGCAGACAGTTCTATGGGACACTATTAAACTCGTACAGTCATACTTCTCACACAGCCCTTTTCTCATTGTCATCGCCGTTCCTGCAAATGGCAGGCATTTGCAGACATTGCTTCATCTTCTTCAGTGATTTAAAACACCCACCTTAGTCTCAACTGGTTACCTTCTAATCTGGTGCCCTCCCAGTTCTTTAATATTGCCAGTTTCTAGGACCTTCACCTCCAGACTTCAGACTCCTTGAAAAACTTTGTCATCCATGAGCTTCTGTGTTGACTTGAACTGTTTATAAGACCTCAAGCTCAGAACTGTCTTTGATGTGCCATGTTCTCCTCCAACTGGTCCCCTTTATATCATCCCAGCTGTCCTACTCTTTTCACTGTGAAGCATCTTGAAAGGGCAGTCTTTAGCCTTCCCTCTGCTTTGTTACCCCACTCCTTTCACAAAGGTCTCTGGAGATCTTTTAATGGCTAAATCTAATGGATCCCTCTCACATTTAAATCCCCTGACAGCTCTGACTCATATGATGCTGTCCACTCCCTCCTTCTTGCACAATGACATCTGCATTTAATTACCATGATCTCACACAGCCTGTTTCTCCTTCCAGCTTCTTGGTCCTCTTCAGAGACATTTTTATTGTGCCACTCCTTCAGAGTAGGCCTTCTTTCCCTGGGAAATCTCATCTGCTTCCTGTTCAGTCACTAAGTCTGTATGCGTGTGCCTCTCAGCCTACAGCTGTCCTTGATTTCCCTCCTGACTGCACTGCCAGCATTTTCAACTGCTTGTGGACAGGAGTAACCTGTTACTAGAAACCCAGCATCTCCCAAAACAAGCCGTGTCTCTTTTCAACCTGCTTTCTCCTTTGTGTTTTTTACTTCAGTTGGTGAGAACTCACTAGACACATCTCTTAACTTCTTCCTGTTCCTCATCCACAACCCCATCCTCTATGAGTAGCCAAGACCTATCAATGCTGCTCCCACTTTATCTCCCAGTCCATCCCTTCCCTTTCCCACCGCCACTGCCTTTGTTTAAGCCCTCACTTCCTCTTTCTTCATGATTGCAATAACCCTGTTGGTCTGCCGCTTCCTACCACCAGAGTGATTCTCAGCCACAGCGCTGAACAGTTTACCCTCTCTCCAAGCCAAAAAAAACGTTTTTTTTTTTTCAATAGTTTGCCATTGTCTACAAAATAAAGTTCAAGTTATTTTCACCTGGCTCTCAGTGCCTCCTAGAACCTTTTCTCAACCATCATTTCTAATCTCCTATTACTCAGGTTCTGTTCTCCAAATACAGTTCCTTGCTTAAGGCTACATCCCCCAATGCCTTTCCTCCTAGTCCTCACCTCACTTGAAGCTAGAATAAGCCCCTCTTTTCTTTGTATCATAACATTTTTCATTTTGAACACCAGTTATAACACATAACCTATTTTCTTCATACTGAGGTGAAATGGGTTCATTTTTCTTCCAGATCGTAAGATTATTCAAAGTCTACTCCACAAAAGATTATGAAGCTTGCCTTTTTAAAATGAAGTGTTGTAGTAGCAATTAGGATTCAGTAAAGTGTAAAAGTCTGCTCTGGGACTGGATCTTTCCAGTAGGAAGAGATGACACAGAAGCACAGAGCCACTGAGCTGTGTGGCAGGAAGTGGGCATGTCTCACCAACATCTGTTTCCCCTAGTCTAGGATTTCACACGTATCAGAAGAAAGGCATCTTCCAGCTTGAAGGCCTAAAAGATCATGCAGTCCAATCTTCATGTGCTCTAGCATGGGGAAGTGAGATCCCTGAAGTTAGGGACTCGCCCAAGGTTACCAGATTGGTGAGAGACTAAGCCGGAGGGCAAACTCCCACACCCCAGGACAGCCCCTCTGCCTTTGCGCCCTCAGGGTGGGGGTAAGGTGTCACAGTTGTTAATCAGTGTTATGAATATTCCAAAAGCAATACAGTGTAATTAATTACTATATTTGGGCTGAGTATCCAAATAAACAAGATCTTGAACGA TCONS_00195492 s 5' 0 TCONS_00195492 s 5' 0 EMBV3_12256 TGATGACAATAACAGTGGTTCTTCCATGCTGTCCAGATCCTGCTTCTGATCACCCCCCTG Gene GeneID:617087|MXRA7:XM_002696202:237_cdna UTR3_Alt 1 NULL GeneID:617087 19 GENE MXRA7 NULL matrix-remodelling associated 7 EMBV3_36920 CCAGCCCGACTCATCTTGGCTTTCATGGGATTTGCTTTCACTTTCCTCACTTCTGTAGTC Gene GeneID:281678|CEBPD:NM_174267:5_cdna Constitutive 1 NULL GeneID:281678 14 GENE CEBPD NULL CCAAT/enhancer binding protein (C/EBP), delta EMBV3_17125 CTCAGGAAGATGAGAGAGGAATCTGTATACATATATTATACACAGGCCTGTTTGTATGTT Gene GeneID:514631|CDCA7L:NM_001104977:17_cdna Constitutive 2 NULL GeneID:514631 4 GENE CDCA7L NULL cell division cycle associated 7-like EMBV3_19168 GGCCCTATGCCAAGGCCTACACACGCAGTGTTCTTTGATCTTCAATACAGTTCTTTACAG Gene BVV0102_085765 + 1 EMBV3_14079 GK000022.2:13681232-13842702 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130036 1 XLOC_078747 NonCoding TCONS_00130036 XLOC_078747 NonCoding NonCoding - 22:13812556-13812819 - TSS96903 263 1 0 0 0 0 0 0 0 0 0.00303607621899561 0 0 0 1.35957495770841e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.081030312601331 0.547290182726506 -0.0272853112646852 0.689121334957847 CAGAGGGGACAGAAACACTCCACTTGTTGACCATCTACAGCGGGCCAGGCCCTATGCCAAGGCCTACACACGCAGTGTTCTTTGATCTTCAATACAGTTCTTTACAGATTAAGAGACCGAAGCTTTAAAGAGAGGGTGGAGAGGACTGAGTTCTGAAGTGTCCGCCGTGAGGCCCCCAGCACCGCTTTGCTTCCTTGCATTCATTAAACATTAGCACAGGGCTCCCAAGCATGCCTTCTGTAGCACGTGGTCCGAGGCACTTC TCONS_00126155 . 5' 29765 TCONS_00126155 . 5' 29765 EMBV3_23927 TCACCAGCCTCTGGGATCTAATGCCTGATGACCTGAGACGGAGCTGAAATAGGACTTCTC Gene BVV0102_092657 + 1 EMBV3_15925 GK000013.2:24085890-24241793 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42119 AGTACTATCTGGTGGACACACCAGTACAGCCCATGACCCGGAGACTGTTTGACCCCGAGA Gene GeneID:784183|LOC784183:XM_002688122:4_cdna Constitutive 0 NULL GeneID:784183 6 GENE LOC784183 NULL similar to hCG2038359 EMBV3_16511 TGGAATCATGACCTGCCTGTGCAAAGGGACAGATTGCTTAGATTGCTATACTAGTGGAAC Gene BVV0102_065137 + 0 NULL GK000016.2:73939372-73955569 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070187 TCONS_00070185 TCONS_00070186 TCONS_00070183 TCONS_00070182 TCONS_00070184 1 XLOC_042155 Coding TCONS_00070183 XLOC_042155 Coding Coding RCOR3 16:73953181-73957375 j TSS52168 3506 1 TCONS_00070183_2 88 3 0.164559980920582 1.53492628569186e-11 0 1.30350254457562e-32 0 2.16792138212855e-19 2.76091009244852e-25 7.73930671344521e-06 3.85227371989677e-13 3.34535093985841e-78 4.56709307097732e-05 9.83809760318238e-05 3.70044122950926e-05 1.70736659109883e-07 3.9874241451465e-17 3.55031695273436e-52 0.00040407354642571 0.000172175832847424 0.000247208624563108 9.38745074478591e-184 2.85238789672136e-22 4.70501082287959e-09 0.000229689562829685 6.07888809641132e-30 0.000669124601560464 4.70754346463945e-275 7.01981109632963e-27 3.4199510168599e-12 4.45105673075504e-08 5.17908105023904e-05 0.000221516253317667 NM_001192733.1 RCOR3 Bos taurus REST corepressor 3 (RCOR3), mRNA. 0.0 1936 100.00 0.305761551625784 NM_018254.3 RCOR3 Homo sapiens REST corepressor 3 (RCOR3), transcript variant 4, 0.0 3687 85.22 0.909298345693098 TCONS_00070183_2 sp|Q9P2K3|RCOR3_HUMAN RCOR3_HUMAN REST corepressor 3; 1e-42 147 96.59 0.988636363636364 0 coding 0 0 0 0 -0.275593072311208 0.336642236549294 0.0150273404937328 0.802442499684604 GAGTTCAAGAGAGGATTGGAGAAAATAACTGAGTATGTAAAAAATGGTGTCCGCAAATATGGTAAAGATTTTCAAGCTATTGCAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAGAACTTCTTTGTAAACTACAGGCGTCGGTTTAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGAACAAGGAACCCAGGCTTCTAATGGTGATGCTTCTACTTTAGGGGAGGAGACAAAAAGTGCTTCTAATGTGCCATCAGGGAAGAGCACTGATGAAGAAGAGGAGGCACAGACCCCACAGGCTTCTCGGACTCTGGGTCCATCACCTCCTGCCCCGTCATCCACTCCAACGCCAGCAGCCCCCATGGCCGCTCTGAACCAGCCACCACCACTTCTTCGTCCAACACTGCCTGCGGCCCCGGCTCTTCACCGGCAGCCTCCTCCACTCCAGCAGCAGGCTCGGTTCATCCAGCCCCGGCCAACTTTAAATCAGCCTCCGCCACCTCTCATTCGCCCCGCTAATTCCATGCCGCCCCGTCTAAATCCAAGACCAGTGTTGTCCGCGGTTGGTGGCCAACAGCCACCATCACTTATCGGAATTCAGACAGATTCACAGTCGTCACTGCACTAAAGTTAACTTGGACAGAGCTGCAGTAACTTTTCACCCCATCATCACACCAGTGCTCCTCTGACTGTTGATGCAAAAGAGGGAAGAATAATTCTTCTCGATACTGAGGCTGCAAACTAGTTCTGTGGCCAGTGGGCTCTCATAAGTGGATGTCTAAGGAATTTTTTAGTTCACACAACTAAAATGTTACACAACAGAAGGCCTACAGTTAGCCTCCTTTCTAGAGTATACATTCAGCGACATGATCTCGTTAAAGGAAAAGAGATTAAGTATTCTATATACTGAGGTTTTTTTGTTTTGTTTTTACTGTATTTATTTTATTAAGAATCTTTATATTCCTGCCTCTTCATAGTTAAGGCTCTTAGTACAGGAATATTGACTTAGGAATTGTGAAGACTCCTTAAGTTTCATAAGTTAAGGATGTTCAACTATTTCTCTCTTTTTCTTTAATTTAATTTTTAACAACATTTTCCTATGTTAGGAGTGCAAGAATAGATAACCTGCATTTCAGATTTTGACGTATGTTCATTTAATGCATATTTAAGAAATTATAGCTGCATATCCCTTTTTTCAAAGACTTGCTTTTTTTTCTAAAGGAATTTAAATATATTCCTTTAAAAGAAAGCAATTTTATCAATTGCAAAGCAATTATATGAAACCACAAAGAATGTACTGAACCTGCTAACCCTTTAACATACAGTTTAGGGTCCTAGTGCAAAGTCCTTGCTTAAAGGTCATTGACTTGCCATCTTTCAGTAGTAAGAGGATGGGAATAATTACAATGAGGACTTCATTTGTTAAAGTACAGTGTCTTTAAGTTCCTTAAAAATGGAGTTAATGTTTTTTTTTTTTTAATGTTTCTAAATGCTATCAGCTTTTAACTAGTAGTTGCCTCCATTTGGGGACTTTAGAAGAGAATTATATTTTGTCAGTTATGTGGAAATAGTGGTTCTGGAAGCATTTATTTACAATACCCTTTTTGTGTTTATGTTATGAACTTTAAATTGCCCTCATACTTATTAATATGGTCTGCATTTAATATAAAAGATGTTTTCTTGATCAATCTCTATTGTACTATTTGGATACATTTGTGTATTCCTTGCAGCCAACCTGTACTCATGGGTTTGGTTTAGGGTTAAATCATCATTATTTCATAAAATAAATTTAAGGATTTGTTCTGTGTTATCCAAAGATACATCAGTATATTGTCACAATTGTGCTGTTAAAGTGCTGAGACCCTTTTTATAAAGAAACAAAAATTTCAAGTCTTCTCAATTCAACACATAATCATTAAGCACCTACAAAGAATATTTTACAAGTGATAGTATTTCAACAATGTATTACTAATATTTTTGATACAATGATTTCATATTGGAATCATGACCTGCCTGTGCAAAGGGACAGATTGCTTAGATTGCTATACTAGTGGAACTAAAGATAAATGTTTGCACATTCACAGTCTCACATTTAGAGCTGTTTCACAAAATGATCAACATTGGAGGCCCTAGTTTATATTTTGAGATGTCATATATTCTCCAGATGTTAGAAAAATAGTCCCTACCTTTGGCTGTAAAGCGTTAAAGAACTATTGACTTACATCCCTTAATTGGTTTTCCTTTTGAAGTTCAGACCATTTATTTCCATAAGTACCTTAAGTTCTAACATAATCTAAAAACTTTTTTCAGGATGTGTTCTTTCTCACTGGATCATCTTGATTTAAAATTCTTAATATTCAAGAATTTATACTTATTTTTACTTTAATAGCCATGGGGACAGTTATATATCTTAAAATATCTAAAGCGTTTTTAGAAGTATTTAGATTGTCTTGCACATGTGCATACTCTACAGCCTCTGTCGTCTTGTCTCTTGTCAGTAGACCTTCAGTATACGGTGTGTGGGGTATGTGAGTCAAGCTGGTCAGCACCAGCATCTGTCCAGCTGTTGAGTATATTGTGGTTCATTTAAAATCCGTTCTATCCCAGCCATGAGCAAAGGTGCTGTATCTGAGGGCTGTGCTGTGATTTTATTTCCGTACACTAGAGCACACAGTAGAAAATTCTTAGCTTCATTAGTAATATGACACATGTATATAGTGAGATGTCTTTATTGTGTGCTTTGCATATTTTGTAAATATTTTGCACGTCATTATTTTTCTTTTTTGTTTAAGCAGTGTTTGGCCTGGAAGAGTGATATGCTTGCTGCTTAATCAAAGGATTAAAGAGTTAAAGATGTCTATGTCTTCTATTTTTATATAATTTCATGTTGTATGAGAAATTTAGGACCTCTTCACTGTGAAATTCTAAATACTGATTTTTATAAAAAAAAAAAAAAAGCAAAACCTAAAAATCTTTTAATGACCATTAATTTCAAGTTTTATCAGTTTAAAAAAATCTACACCCAAGTATTTTTTTCATTACCTACTAAAAATAAATCATGCTGTTGACACATCTGTTAATATTCATGAAAAAATATTTTTTCTATATGAGTTAATTCCAGTGTAATATTGATGGAGGTAAAGATAGGTTACTATCGAAACGTTTTCTGAATAATCTTACAATAAAGTGAGTAAAATATAATGTAAAATAAAAATGAAAGAATGTCAAATTTTGTCTTAATATAGGCCTACATTCTTTTTAGGAATAGATGCAGAGAACAAGCGAAAAAAAAAAACCCTGACCATAGTGATCTTCAGCTGTATGAAGAATCTCGCAAGTATTTTGGTTAAAGTACCAGGTTTAGTTATTAAACACATTGTATTCTTTTAATGTTTCTTCCTGCTATGAAAAGAATGTTATCCATGAATATTACTAACTGCTGATCACTTTAACACCGGGGTGGCAGCGTCTTCTCAAAAAGAATAATCTTAGAACTCAAAG EMBV3_17240 CTTTGGTCAGAGCTGAGGGTGCGGTCGTTGTTTTCCTACACGAGGTGGAGCTGAAGAGTA Gene BVT0102_044490 + 0 NULL GK000001.2:128085714-128144729 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010944 1 XLOC_006495 NonCoding TCONS_00010944 XLOC_006495 NonCoding NonCoding - 1:128085887-128087413 - TSS8021 1526 2 TCONS_00010944_1 46 1 0 0.000365553805977088 7.90178230920101e-05 2.42567812097949e-05 3.80924229675186e-05 3.23537482088903e-06 3.98492357499535e-05 0.000107003809438175 3.87596246937957e-05 7.2386589529512e-05 2.96588490590508e-05 8.10065143326346e-05 0 1.88026350526289e-06 0 2.57205899477345e-05 0.00017307748410926 0 0.00100297771632449 2.81950241461701e-05 0.000131952860923658 0 0 4.80945830266118e-05 3.29578571963771e-05 8.62654533799037e-05 4.61694712991698e-05 0.000119026050517484 4.4060498019407e-05 3.49938783941891e-05 7.87974881816979e-05 0 noncoding CCCGCCCCTCCCCGCGGTACCCGGCAGGGCTCCGGGACGCTCTGAGTTCCCTTATCCCTGGCCGGAGGGAGCGAAAACTGTGCAAAGCAACTTAAAAAAAAAAAAAAGTCATGAGAGCTTAATAAAAAGCAGGTTTATAATGACAAGCAAAAGATGAGCGTCCCTGACCCACAGGTTTCTCAGAAGGAGGACTCTGGGGAGATGCTGCGGGCGACCGGGACCCGGGGTCCCCTCGCTTCTTGGCCTGCTGCGACGCGGGACAAGGAGAGCACGGAAACTACTCCAGTCAGCTAAGTCGCCTTCACCGAGAAGGGGACCTCACCCCTCTCTCCGCAAACCGTTTCCAGGCGTTCTCCTCTGGGCTCTATGACGTGACTTAAAAGATAGTCGGCTGAAGTTTTTCGTGAAGGTGTTTGATGTACTACATACCGCTGCTCAGAGAACGCCCTGACTTGGCTCTTTTGAAGGAGTCAACTAGGAATCTTAGGTCAATGGGGATTTCATCCAAAGTTTGCCAGTGTTAAGTAAGTTCAGTATAGTTTTCTCCAGCTTTAATTGAATTTATCAGTGAAACCAATACATATGTTTTCCTGAAGTTCCTATCAGCTGTTAAGATCTGCTTTTTCTCAAACACTCAGGCTGTACAGGAAATCAATTCTTCGTTTAGTGTTGATGCCTAAATAATGTTCCTGACTTTTCATCTTTTCCACTGCATGGTTGCTCCCTTTGGTCAGAGCTGAGGGTGCAGTCGTTGTTTTCCTACACGAGGTGGAGCTGAAGAGTACTGTGCTCTGAGACTTGTGACAGCATAAAAAAATTTAAATGGAAGTTTGGGCAGGAGGTGGGGGTTTGTTTTGTTTTGTTTTTAGAGAACAGAAATAGAGCACCGCCTCTGTTTTATCAGCAAATAAAAATTATGAATGAAGGAATGTAGCACACACCTTATTGTTGGAAATGATGCATTATAGTCTATCAGAGAGTTTAAACAGCTTGCAAATGCATTAAAGGAGTAAATGGATAACAAAATTCTGGTATTTCTCTTGTTTCCTCACTTTGTTTATCAAAGCAAGGAATTACGTCTTTCACAAATTGAAAAGGGATAGAAGAATATCTTATTATAAAGTGATTTCCCCCTGTGCTTAGGAAAGCTAAATTTATAATTATGACCAAATCCAGTTATTTTGTCGAACCAATGACAGCAAAAGAGTTGTAGAAGACTTTGGTAAAGTTTGGCATGAAAATGGTATTAGAAATAGCAAAATATTGTGCAAGCAAACTAGAATGCATCTCTACAGTTCCTAAATAAGGTTGAAAAGGAACTGAGGAATGGAAGTAGTTAAGTATTTTTGTCTCATTTAAAATCGAACTATGAATTAGAGGACAGCTAAAATATTGCTGGAGTTGGTAGCAGGCTTTCTAGTTTGGGCAACACTAAAGATGCAGAGTCTGTTTGAAATAAAATATAAAACCATCTGCTTTATTGATACTGTGTGTGTGTTAACAAGCACACTTCGGGAAATAACCTG TCONS_00005149 . 5' 128 TCONS_00005149 . 5' 128 EMBV3_14564 GGACTTGCATCCAGCTTCCTGTTTACAATGGGGCTATCTGATGGGTTAGAGTGCCTTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42154 CATTCTACTTATAGTCTATGGTAGTTTCAGCCCTGGCCATGGGTCTCTGTGTCGCCATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41704 CATAAGCCTGGAAGGTGGAACTGTCAATACAGGAGTAGCTGCGGAGGCTCTTAGCTGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16825 GTCCGCTGTGCGCCTGCCCGTGAGCTGCAGTCCTGCTGTGTATGTGCCCGTGAGTTTTAA Gene GeneID:100295858|LOC100295858:XM_002685131:89_cdna Constitutive 0 NULL GeneID:100295858 1 GENE LOC100295858 NULL similar to keratin associated protein 12-1 EMBV3_20899 AGTTCCAAGGGTCCTCAATGTTACCGTGACACCTGCAAACCAGTGTCGCCCCAACAACGT Gene GeneID:100336938|LOC100336938:XM_002689142:128_cdna Constitutive 1 NULL GeneID:100336938 7 GENE LOC100336938 NULL azurocidin 1 preproprotein-like EMBV3_22114 CCTCTGATGCTGTCTTCCCACCTCCTGCTTATTCTCACATTTCCACAGGATCTAGCCTGA Gene BVT0102_136175 + 0 NULL GK000020.2:5534590-5608644 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13835 TCATGTCTATACTCCACTAGGAGAACCCTTAGCACTTGCGACCTTTATATCTTCAGAGGG Gene BVV0102_154268 + 0 NULL GK000010.2:50126272-50282170 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013910 TCONS_00013914 TCONS_00013903 TCONS_00013908 TCONS_00013924 TCONS_00013909 TCONS_00013904 TCONS_00013913 TCONS_00013901 TCONS_00013920 TCONS_00013917 TCONS_00013902 TCONS_00013922 1 XLOC_008214 Coding TCONS_00013922 XLOC_008214 NonCoding Coding - 10:49993971-50280409 - TSS10208 1240 0.191129032258064 4 0.995684915007489 0.000347831617316825 0.000906764318486007 3.18338009252381e-05 4.71886330905633e-12 0.000250949093897983 6.49219348962016e-66 1.53253587069504e-81 9.05507907217374e-92 5.07932865214103e-34 4.58226466677636e-45 7.56972587188195e-23 1.30272394247054e-36 1.08098443718458e-172 0 0 0 0 0 5.83400619224019e-11 2.6621257987682e-40 5.83934355303108e-118 0 0 0 5.77856921095646e-05 1.97520033426731e-05 7.19865675926776e-05 0 2.8019226003358e-16 2.6262974127597e-23 XM_005275214.1 TRIM40 PREDICTED: Homo sapiens tripartite motif containing 40 (TRIM40), 2e-11 75.2 80.68 0.0701612903225806 0 noncoding 0 0 0 0 -0.232436653906345 0.23495649592434 -0.0557806859379251 0.285288146552111 GAGTAAGTCACAAATAATATATTTTTTAGGTTTCTTGTTGCAAGGGACATACTTGAAGGTGGTCCCCGTAAGCTCTACATCCTGGTGTTCACGCCTTAGTATAATCCCTACCCCTTGTGCATAAACAATAGAACATGGTAAGATAATGGGCTATCACTCCTGGGATTATATTACGTTACATAAGGCTCTGTCTTGCTAGCAAAGGCTTTACAATTGCCAACAAAATTGCTCTAAGGTCTTGCTCTCCTTGCCAGCTTTGAAGAAGCAAGATGCCCATGAGTCCTATGACTACAAGCACATGAGTTCTGCCAGCAACCTGAGTGACCCTGGAAGCAGATGCTTTCCCAGCCAAGCTTGCAGAGGAGAACCCAGGCCTGGATCACAGCCTTGAAGAGGCCCTGCTAAGCTGTGCTCCAGTATGACTTGGTGCAGCAATATCAGGAGTCCTTCTTGTGGAAATTGCTGGAAAACACATTTCAACTAACTACGACTAGGTTAATACCAGCGAAAGGACTAGAGAATCTTGGTTTTTCCAGAGTTGTACTGATTCTTTAAGTATGAAGAAAATGGACACTATTCATAACCCTCTGAAGATATAAAGGTCGCAAGTGCTAAGGGTTCTCCTAGTGGAGTATAGACATGATGATTTCTGGGTGGGTTTCTCTGTTGCACAAGGTCTCTTGTTTAATCATTTTACACAGTGAAGTGTTAATCACCATTTAAGTTTGTCTTTGTCTTGTAACTTCATTAGTTGAATACACACCTCACTCTGGAAATATGGTGACCCCTTCAATAAAGTTTTAATTGGCCTTGAGCCATACATTCTTGGCAAACTTTAATTCTCTGCAAAAATCTGAAGAAAAGCAAATACTTACAGGCAGGTATTTAACTTCATTCATTTCTTTAAAATAAATGCACCAAGCATTATTTTCCCAGATGAAGGATTAAAGAGAAATCTATTCAGTTAAAAGTGAACAGGTTTCTTGACAAGCTATGTGGACTTTTAAGTAACTTCTGAAAAAGAAAATTTCAATGACTGCAATAATTTAAAGGACCAAGGAAATGAAGGGTCACTGCAAATAGGTGTATCAGAATATAAATATTGAGTAAGCAAGTTTGCTTTCAAATTCTTTATCTCCATATCGCCTCTACCTGGTTTCGATAGAAGCCTTATATTCATACAACTACTATTTTGTAAAATGTATGTTTTAAGATAGACAAAATAAATATAAAGTACTAT TCONS_00017225 r 3' 1728 TCONS_00013888 TCONS_00013891 TCONS_00013892 TCONS_00013893 TCONS_00013896 TCONS_00013897 s 3' 89422 EMBV3_42296 AAGAACTGAGAGCAACGAAAATGAAACCTGAACTTCTGAGTGGACCTATTCCCCCGGGCC Gene GeneID:541110|MARVELD2:XM_002696281:27_cdna Constitutive 0 NULL GeneID:541110 20 GENE MARVELD2 NULL MARVEL domain containing 2 EMBV3_27623 GTTAAGGTGGGGAGGGAACATGGGTGGTTGTAGGAACACAGTGAGAGGAAGTTGCAAGGA Gene BVT0102_123694 - 0 NULL GK000015.2:74459011-74519281 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060001 TCONS_00060002 1 XLOC_036554 NonCoding TCONS_00060002 XLOC_036554 NonCoding NonCoding - 15:74495056-74498639 - TSS44913 2390 3 TCONS_00060002_7 109 0.522175732217573 3 0.333612506979341 9.40501777417125e-22 0.000379178633695264 0.00034460322459133 1.73700278801322e-05 0.000291556623694295 1.4217299864512e-05 0.000107360323781501 1.24095206219201e-05 8.25327609456768e-05 0 0 0 4.80125962607052e-06 8.06946134020673e-05 1.02625472224756e-05 0 0 0 0.000227828762798592 1.23649558995701e-05 6.4237635460238e-05 0 0 4.33474659761057e-07 0.000342471746774877 0.000443353581131181 0.000270933746062921 0 0 0 XR_227908.1 LOC101905914 PREDICTED: Bos taurus uncharacterized LOC101905914 (LOC101905914), 3e-81 307 100.00 0.0707112970711297 NM_153837.1 GPR114 Homo sapiens G protein-coupled receptor 114 (GPR114), mRNA. 2e-07 62.6 81.82 0.0267782426778243 0 noncoding 1 1 1 1 -0.0615478151448942 0.649403795615742 -0.0346876262516217 0.555060467698682 GGTGGCAGAATATGTAGAAGTGCTGGGAGGGTGGTGGGCCAGGGGAACGGTGCGGCTATACCCCATAGGCCTTCAGGGCCTGCACTTGCCCAACCTCAAGTCCAAACAAAAAGCCTGGAGTCAGTGACAGAGACATCAATGATTTAATGGATGAGAGATCTTACGCATCTGAAGCAAGGTCCTGGAGCAACACCTCACTGTGCAGAGAGGCAGTTTTCACTCCTGGCCGGGAAGGAGGGTCTACAAGGCCTGGACTGCCCAGCTTCAAGACCAAAGAGCCCAGAGTCAGCAACAGAGATGTCAATGGGGGATCCTACCTGTCTGAAGAGATGTCCTGGAACAACACCCCACCGTGCGTGGAAAACATCGCTGGACAGGCCAGGGCACCCAGCTGATGTCTGAAGAGTTGAAGAACTGCTTGGTGGGGAAAAACCCACACACTTCTGGTGTAAGAAGTATTCAGTGAACACTGAATAAAGAAAACAAGTGTTCTCCTTTCCATATTTAAAATAGGACCCATTGAAGGCCAGTTTAGCATGCTAGTATGAATCATAGGGCTGAGCAAGGAGTAGGTGTGCAGGGCACGCTTAATGGATGGTGCTGTGCCAGGGGGTCAGATTTGCATCCAGAACAAAGGCTTTCAGAATTCAGAGGGAGTTCACCTTGGATCAGGTCAGCTTAAAGGTGATCTCCTCCGATCTAGCCCACCCACGCACTGGGCAGACCTCCTCCAACACGTGTTGTAAATTCAAAAACACACAGGAGTCAGGTGCATCCCGTAAATGAGAGAGGAGGCCCTAGAAGAGGGCGTAAGGCATACCTACATATCTTAAGGGAGTAGCCACAGCTCTACTCCATTACTGATATCCAAGACTGTCGACTAAATGTTGCCAGATCTTCCAACTCTGCAAAAATCAAGCAAGCAAATAAGCTGAAAATCTAGATTTTTAAACAAAAAAATCTCCCAATCCATTGTGGACTCAGTGAAATTTAAAAAAAACCCAAAACATCATAGCCCAAACAATACACCTTGGTAGTTAAGATCCATCCAGCCCAACGTACTACCCATTTGAAAAGTCTGTTCTTTCAATTCTAGGAGAATTTCACGTACCATCTACCTGGATGGCTAGTCAGGATTTTCCTGAATACCTCTGATGACAGGGGAGCTCATTACTTAATTTAGTGGCCATCTCTAATTGTTAGGAAAATCTTTTTTTTTTTTTGGCCCTGAAGCATGTGGGATCTTATCTCCCCGACCAGGGATTAAACCTGCAACCCCTGCATCGGAAGGTGGAGTCTTAACCACTGGACTGCCGGGGCAGTCCCAGGAAGATCTTAAATAGAAATTTACCTCCTTGCAACTTCCTCTCACTGTGTTCCTACAACCACCCATGTTCCCTCCCCACCTTAACCAAGAGCACAGCTACCCACCAGGGTCATCAGTACCAGTTCCCTCCAGAAACTAAATCTTACATCTCAAAATGAGGATAATAATAGCCAACATTTATTGAGCACATATACGCCGGACACTATTCTAAGCACTCTACGTGTATTAATTCTCTTATCCCTCAGGAGAACCCTGTGAGAGACACTATTACAAACACATTTTACAGACAGGGAAACTGGACAAATGATGCTAAATAACGTCCAAGTCACACAGCTAGTAAGTGGCAGAGCCACGATTGGAACACAGACAGCCTGACTCCAAAGGGGATGCTCTTAACACTGCAGCACTTGTACAGGGATGATCAAGCTCATTCAATAATTGTTGATGTGAAATTAAACAATACCAACTCTTTCTTCTGGAACATGAACATCATGAACAGGTCTCTATAACACCAGCATTAGAGATGGGTTACACGATATGCAAAGATGTGAAAGATGAGAAGGGAGAAATAATGGGCTTCAATCATGGAGAATCAAGTTAGACACAGTGCAGAACTTCCCGATGTGAGGGCTTTGCACCACTGGAATACAGAATGAAACATTGTGCTTGCTTGCTTTCTTGGAGATCCATTTAAAAAGGAAAGGAAGGAAGAAAGGAGGGGACTAATGTTTCTGGATGGCTCTTCTGTCTGAAGCTATCCAGAAGCAAAGACAAGTTTTATCAAGAAATATGGCTTCTGAGAAACTTGCCGCCTTCCAGTTTCTCTTCCTCATGGGTTTCCCTATGGGAGGCAGAACAATGATCATCTGGGTATTTGAGCTTACTGTGGTCTCAGGCCCTGATGGATCCCGGACTGAGGACACTGGAAGCAAAGAGATCAAAGATTCACAGATCAAACCCCATATCCTAAAATATAACTACATGAGCCAAAAATTGACACAGTGTATGGTTATGCCAATCAAGATGGCTATTCTCTTGCTCTCTGAACATCCCCTGCTCAACC TCONS_00060005 TCONS_00060006 s 5' 20643 TCONS_00060005 TCONS_00060006 s 5' 24225 EMBV3_34204 TGTTAAGCAGAACAATGCCTAACTTGTTGGCTAGTAACGATTCTGGGGTCTGGAGCGTGT Gene GeneID:532067|COBLL1:XM_002685374:289_cdna UTR3_Alt 2 NULL GeneID:532067 2 GENE COBLL1 NULL COBL-like 1 EMBV3_09005 GAAACCGGCCCAGGAAAAGGAAACTTAGGAGAAATCGAAACTCCTGGGTAAAGGAGGGCC Gene GeneID:100337205|LOC100337205:XM_002683999:1_cdna Constitutive 0 NULL GeneID:100337205 Un GENE LOC100337205 NULL interferon-induced transmembrane protein 3 (1-8U)-like EMBV3_28682 ACCTGTATTAGCTGTCAGAAGCCAAAACCTGGTCCTTCCTGCTACTTCTCCATGTCCTGC Gene BVV0102_148019 + 0 NULL GK000001.2:150440581-150689881 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21456 TGTGACAAACTTCCCCTCTCAGTACCCCCTCCACAGTCCCATCGCCTAGCATGACTGAGT Gene GeneID:514442|HARBI1:NM_001075668:60_cdna Constitutive 0 NULL GeneID:514442 15 GENE HARBI1 C11orf77 C15H11orf77 MGC139623 harbinger transposase derived 1 EMBV3_02632 CTTGGAGTCTTGGTTCCTGTTCACAGTGTTTATGGGTTATCTCCCCTTCCATCCCTCACC Gene GeneID:787259|WIBG:NM_001102344:97_cdna Constitutive 0 NULL GeneID:787259 5 GENE WIBG MGC148483 within bgcn homolog (Drosophila) EMBV3_35191 GGCAGCCCAGAACATCTCCAAGACGATTGCCACCTCACAGAATCGTATCTATCTCACTGC Gene GeneID:515363|PHB2:NM_001046198:49_cdna Constitutive 0 NULL GeneID:515363 5 GENE PHB2 MGC137786 REA prohibitin 2 EMBV3_13794 TCGATTGCCTTTAAGCGGGGTCAAGGCCAGTATCCGGGTGCTTAACCGACTTTGTATAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06862 TTATCGTCTCCACCTCCCCCTACAGCGAGAAAGACACAAAGCAGATCCTTCGCATCCGGT Gene GeneID:511048|RUVBL2:NM_001038526:178_cdna Constitutive 0 NULL GeneID:511048 18 GENE RUVBL2 MGC134565 RuvB-like 2 (E. coli) EMBV3_15723 TGGCCAATAAGAAGCTGGTCCTCATCCCGCTCATCTTCATCTGCCTGCGGGTCTGGAGCA Gene GeneID:538468|GPR157:XM_002694048:133_cdna Constitutive 0 NULL GeneID:538468 16 GENE GPR157 NULL G protein-coupled receptor 157 EMBV3_18887 TGTGGACACGTCCCCGACTCCTGTTAATTGGAACCTCATGTGTAAGCACCTCTTCGGCTT Gene GeneID:282517|NDUFB8:NM_174667:57_cdna Constitutive 0 NULL GeneID:282517 26 GENE NDUFB8 NULL NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa EMBV3_37511 TGCTGCCGCTGCCGCGGGGCTGCGGAATCGTGAGATACATGTTTATTCAAACACAAGATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30488 GCTGATGCATTTGCACCTGTGGCTTACCTACGCTTTTTAGAATTGCACTTGGAGGACAAG Gene GeneID:767944|ATPBD4:NM_001077016:109_cdna UTR3_Alt 2 NULL GeneID:767944 10 GENE ATPBD4 MGC128665 ATP binding domain 4 EMBV3_00008 TCTAGACTCCCTGTTCCTGTTCCGTTTCGGATGGGCCAAAAAGTTGCTGTGCTCCCACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06187 TCATACCTAATGAGAGCTCCGCATCTAATGTGCAGCTATACCTATGGGTTATGACAGAGA Variant GeneID:616019|MSMB:XM_002698973:132_cdna 233^338 1 EMBV3_04707 GeneID:616019 28 GENE MSMB NULL microseminoprotein, beta- EMBV3_01712 TATCTCTTTGCACATGGACAGCTCTGTGAGAAGGGCTTCGACCCTCTTTTGGTGGAAGAG Gene GeneID:517788|UBAP1:NM_001100376:31_cdna UTR3_Alt 2 NULL GeneID:517788 8 GENE UBAP1 NULL ubiquitin associated protein 1 EMBV3_20708 GAAGCTGCTGAAATGCTGTTAGCAAATCTTAGACATGGTGGTGCTGTGGATGAGTATCTG Gene GeneID:510469|RTCD1:NM_001046055:77_cdna Constitutive 0 NULL GeneID:510469 3 GENE RTCD1 MGC138072 RNA terminal phosphate cyclase domain 1 EMBV3_12711 TGGACCTAGAACCTCAGGGCTACATCAAGCCACACGTGGACAGCATCAAGTTCTGTGGAT Gene GeneID:535305|ALKBH7:NM_001046402:72_cdna Constitutive 4 NULL GeneID:535305 7 GENE ALKBH7 MGC137333 alkB, alkylation repair homolog 7 (E. coli) EMBV3_40656 TTCAGGGAGCAGGCAGCCGCTGCAAAGGAGAAGTCACTGCCCAGTGCAAACCACCCTCCT Variant GeneID:512205|RCSD1:NM_001034418:14_cdna 270^359 1 EMBV3_42714 GeneID:512205 3 GENE RCSD1 MGC128398 RCSD domain containing 1 EMBV3_00067 ACGAAGTTTTCACCATCATCTCCCTCCCCAGGGGCTTTAACTGCAGTGTTTGGCAGAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00477 AGCATGGCCTACGGACAGATCGGAATGATCCAGGCTCTTGGTGGCTTCTTCTCCTACTTT Gene GeneID:282598|ATP1A3:XM_002695074:485_cdna Constitutive 0 NULL GeneID:282598 18 GENE ATP1A3 NULL ATPase, Na+/K+ transporting, alpha 3 polypeptide EMBV3_16726 TGGACTTCTGTATCCTGAGGTTTTTCTTGAATGTCAGTGTGTGTACCTGGCTGGAGTCCG Gene GeneID:535214|ZNF236:XM_002697651:52_cdna UTR3_Alt 2 NULL GeneID:535214 24 GENE ZNF236 NULL zinc finger protein 236 EMBV3_06705 AAAGACCTGGACCATCAAAAGAACCAAGTAACACAGCTTTCACAAGAGCTTGACAGGGCC Gene GeneID:524913|PIBF1:XM_002691887:21_cdna Constitutive 0 NULL GeneID:524913 12 GENE PIBF1 NULL progesterone immunomodulatory binding factor 1 EMBV3_26218 TCTGTGGACATTCCATATGAACACACAAAACCTATCCCTCGGCCAGATCCAGTGCATAAC Gene GeneID:614148|MRPL42:NM_001037622:43_cdna Constitutive 1 NULL GeneID:614148 5 GENE MRPL42 MGC133556 mitochondrial ribosomal protein L42 EMBV3_00585 CAGTATTGCTGCTAAAGACGCCCTGGAGAGACACTTTGGAGAACAGAATAAGCCTTCCTC Gene GeneID:282315|POU1F1:NM_174579:87_cdna Constitutive 0 NULL GeneID:282315 1 GENE POU1F1 Pit-1 Pit1 POU class 1 homeobox 1 EMBV3_19672 TCTGGATTCACACAGAGTTGAAAAGCCAAAGAACCACTGGATGTTGGTGACTGGGGCTCC Gene GeneID:511761|C21H15ORF26:NM_001075536:24_cdna Constitutive 0 NULL GeneID:511761 21 GENE C21H15ORF26 NULL chromosome 15 open reading frame 26 ortholog EMBV3_26577 ACGGGCAAGAATGAGGCCCAGCAGAAATCAGAGCTGGAAGATGGCACCCCCCGGGCTGGG Variant GeneID:280804|GH1:NM_180996:167_cdna 354^515 1 EMBV3_39418 GeneID:280804 19 GENE GH1 GH growth hormone EMBV3_15825 TGTTCTACTGGATGTATGTGGGGATGCGAGGCCCCGAGGAGAAGATGCAGGGGGAGAAAA Gene GeneID:618888|C23H6orf64:NM_001038225:18_cdna Constitutive 0 NULL GeneID:618888 23 GENE C23H6orf64 C6orf64 MGC134290 chromosome 6 open reading frame 64 ortholog EMBV3_18400 CAGCTGACCGGACCTGTTATGCCCATACGGAACGTCTATAAGAAGGAGAAAGCCAGAGTC Gene GeneID:508221|RPL13:NM_001015543:144_cdna Constitutive 2 NULL GeneID:508221 18 GENE RPL13 NULL ribosomal protein L13 EMBV3_35835 ACCTAGGCGTCAGGCTGCATTAGGATTTGCCTAATCCCGTCACTTCCTATGCAACCACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35166 GGGCTACGAGGAAACCCACATTCAACAACAGGTACATAGCATTGAGCAATAACGACAGGC Gene BVV0102_254697 + 1 EMBV3_09726 GK000002.2:125324176-125343512 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106563 TCONS_00106566 TCONS_00106564 TCONS_00106565 TCONS_00106567 1 XLOC_062836 Coding TCONS_00106563 XLOC_062836 Coding Coding GMEB1 2:125338870-125357660 j TSS78411 6085 1 TCONS_00106563_3 415 0.0806902218570255 6 0.676459630634946 0.000643760202058264 0.000477927713556816 0.000398145470949587 0.00126290133122648 0.00144555345169875 0.000129560471336698 0.000489178009232477 1.32651811778352e-09 0.000439187646221896 0.000156595535336412 6.46069493792707e-10 8.55273800116432e-05 0.000149971126109942 0.000172749941209921 0.000113648071035936 0.000874171423480952 6.70684236778564e-05 0.000437810504865936 0.00063112765470672 0.00239401395350441 0.000283679860411267 7.46477347804972e-05 0.000117349004155672 0.00031286391224087 1.6759469217736e-08 0.000384768954048567 0.00051594901898616 3.55931610754558e-05 3.68243340599881e-05 0.000229788702946814 NM_001046475.1 GMEB1 Bos taurus glucocorticoid modulatory element binding protein 1 (GMEB1), mRNA. 0.0 2500 99.86 0.228430566967954 NM_006582.3 GMEB1 Homo sapiens glucocorticoid modulatory element binding protein 1 (GMEB1), transcript variant 1, mRNA. 0.0 2569 91.82 0.294823336072309 TCONS_00106563_3 sp|Q2HJ87|GMEB1_BOVIN GMEB1_BOVIN Glucocorticoid modulatory element-binding protein 1; 0.0 841 99.76 0.997590361445783 0 coding 0 0 0 0 0.0409123977069075 0.722682172831846 -0.0109163592783404 0.890113256240854 CATGTGCTGAAGTTTTATGTCTCCAGAAGTGGCAACAGATCTTGCTGGTCTACAAGAAAATGATGGACTCCGGACAGATTGATTTTTACCAACATGACAAGGTTTGCTCCAATACCTGCAGAAGCACCAAATTTGATCTTCTTATCAGCAGTGCGAGAGCTCCAGTGCCAGGACAGCAGACAAGTGTGGTGCAGACGCCCACATCGGCCGATGGTAGCATCACACAGATTGCCATCTCAGAAGAGAGCATGGAAGAGGCAGGGCTGGAATGGAACTCGGCTCTCACTGCTGCTGTCACCATGGCCACAGAGGAGGGCGTGAAGAAAGACTCAGAGGAAATTTCAGAGGACACTTTGATGTTCTGGAAAGGAATAGCTGATGTTGGACTGATGGAAGAGGTTGTCTGCAATATACAGAAGGAAATAGAGGAGCTACTTAGGGGAGTTCAGCAGCGGCTCATCCAGGCTCCCTTCCAGGTCACAGATGCTGCTGTTCTTAACAATGTAGCACATACATTTGGCCTAATGGACACAGTTAAGAAGGTTTTGGACAACAGGAAGAACCAAGTAGAACAGGGAGAAGAGCAGTTTCTCTATACTCTCACAGACTTGGAACGCCAGTTGGAAGAACAGAAGAAGCAAGCCCAGGATCACAGGCTGAAATCCCAGACAGTTCAAAATGTGGTACTGATGCCTGTGAGCACTCCTAAGCCTCCCAAAAGGCCCCGGCTCCAGCGGCCAGCCTCCACCACCGTCCTGAGCCCTTCTCCTCCTGTCCACCAGCCTCAGTTCACGGTCATCTCACCCATCACCATCACACCAGTGGGTCAGTCATTTTCCATGGGCAATATTCCAGTGGCCACCCTCAGCCAGGGCTCCAGTCCTGTGACTGTCCACACACTGCCTTCTGGCCCTCAGCTCTTCCGTTATGCCACAGTGGTCTCCTCAGCCAAGAGCAGCTCACCAGACACAGTGACCATCCACCCTTCGTCTAGCTTGGCACTGCTGAGCTCCACCGCCATGCAGGATGGGAGTACCCTGGGCAACATGACCACCATGGTGAGCCCTGTGGAGCTGGTGGCCATGGAGTCTGGCCTAACCTCGGCCATCCAGGCAGTTGAAAGCACCTCAGAGGATGGGCAGACCATCATTGAGATTGACCCAGCCCCAGACCCAGAGGCCGAGGATACTGAGGGCAAAGCAGTCATTTTGGAGACCGAACTGAGGACTGAGGAGAAAGTCGTGGCTGAGATGGAAGAACACCAGCATCAAGTCCACAATGTGGAGATTGTGGTCTTAGAAGATTAACTGGGGGTCTTGGGGCCAGGAGATATGTTTTGGTTTGGAATTTTAATTATTTGTTTATTTTTATCATTGTCCCACTCATTTCCACATAGGATCCTTTTTTTTTTTAAAAAAACAAGATCTCATTGTTGTAACTGAACATGTCGGGTCCCTTCCAGCCCCTCTCTGAAAAATGGACAAAACAAGCTGCCCTTCTGGAAGTTGAGAGTAGGTCATTCAATGTCCTAACCGTCTTACATCAAGAGAGTTATTTCTTTGAGGGGAGGCATCAAGATAACCCGAAACCCTCTCCAGAAGTCACTTTCCAGGCTGGTCTCTCTGTGTATACATGTGGTTTTAGTCTCATAAGGTGCATTGACCAAACCAGGGAACACAGATCTGACCCTGAAGGCAACCCACTCACACATGGATGCAAAAGTATACTTGATGTTGTATCCTGAAACAAGCCCTCAGAGGCCAGTGCAAAACCCCCAAACAAAAGTGAGTTGACTCTGCTTAGAGGGGAAGATAACAAACTAGCAGAAGCTTAAAAAGGGAAGTGCTTTGGCCAGGATGGGGCAAGGAAATTATCTTACTTCCAGAAGTGCTACTAATGCCTCTTGCTGTCTCTGAGGGTTACCACCATGGGTGCCGTTTTGAGGCAAGGCCAGTGTTAAGCGGAAGGGTACATTTTCACCAAGCAGGTGGCGTCAGGGACCTGCAGCTTGGCAGAGATAAGAATCCAGAGATGTCACAGCTGTGCTTTGGGGCTAAGGCTTACCTTGCAGCCGCTCTGTCAAAGCACTTACCCTCCAGGTCCATTCATTTGCAAACTGTGGTGTGGTATAAAATTGCTCTGGTCCTTAGACTGTGGCTGTTCTGGGCAGGTGGGGCTCCAAGGCCATCATTTTTATTGCATGACTCCAGGAGCAGGAGATTTCCTCTTCCAGACCAACTGCCCTTTTTTGCAGGGCCCTTTCTTGACTTTGGAACCAAAAGCAGCCACTCTTTTGGTGCTTCCTCTTGTTTTCCCCTGTATCCCTGAATGGTTAATGGCATCTGTCTCCTGGATCCCACGCTCTTCAGCTTTTTGGCTGATTCAGAGAACAGTGACAGGTGGCTGCCTGCCTTCATCCCCTTTTAGATTCATTTCTACCATTTATACCACAGATGTTTCTGTGAGATATTGAGCTCATAAAAGACCCTTAGGTTTGGCAGGGAGGACTCAACACCCCAGCCTATCAAGTAGATGTCTCCTGAGCAAGCTGGACTTCCTGGGAAAGAAGCATTGTCTGCAGCATTATATTATAGGAAATGTACCAGGAATGTAATCATAATGTCTTTGGGTGGGGAGGGGGTATTTTGTTTTGTTCTTGTTTTTAATGTTTTTGTATATTTGGAGCTGGGCCCATTTTCTGTGCTGTGATTCTTTCTCTTTGACCATCTTCAGTGTTTGGGGCAAGAGTGGACCCTGGTTTTTATTTCTAAAGAATGCATTGTTTACTGCACTAGGAAAAATGTAGGGAAACTGCAGACCATTTAAAGGAAAAGTAGGTCAAAAAAGAAAGCACACATCTTAGGAGTGGGAGGTCTTTTTTTTTTTTTTAATTAAAAACAAAACTTTGACCTGTAGTTTCCTTCTTTTTTTTTGAAGGCACCCACCTGAAGCTATGTTTCTTCCAACGGATGTTGGAAACCCTGTTGTTAAGCAAGTGAAAACTGCGTTCTGCCATCCCTCCGATAGCTGTGTATAGCTAGAGAAGCCCTCTGATTTGGAAGGGTCAATCTTAAAAGGCTTAAGGGTGAAATTTCTGAATCCCATGCAGTTTTGATTTTCAGCTTTAAGATTGTCCGGGGTTTTGTTTTTCTTTTCAGAATAGTCAATAGACAGAGCAATCAATTTAGAACAAAGCTTTGGCCCTTAATATATCTTTAGTGAGGAAAATGACTTTTATTTCTTGCTTCTTTAGATTTTCTTTTGGTACATAAACAAAATTTCTGCCTAAGTCTAAAACTACTACTTGAACCTAGAAAGGCACATGTCATCCCTCATGTGGTTTTTAAGGACACTTTTCTCTTTGCCAGAGACAACAGGCTTAACTCTGGACAGAGGAGGAGCCCTAGAGAACACCTACATGCTAGCTTAGGTTCCTTTCTTATTTCAGAGATGTTGGTACTGTTTTAAAGTAGTGTGAGCATCATGCTTCCTAAGTCAAGAGATCGCCTCCTAAAGACAGAGCCTGTTTCTTTTCACTCTCTGAATATTCCACCTGGTGGAAATACATGAGCTATGTTGTTTTCCTGGTCTTCCAATAGCCTGTCGTTATTGCTCAATGCTATGTACCTGTTGTTGAATGTGGGTTTCCTCGTAGCCCTGGTCTAAATGAGCTCAGATGGGGTGAGACACATGCAAGGCACTGCTGTGTGCACAAGCAGTTGCAGTGAATCATTCCTCAGGCTGAGCTTCCAGTAGCCATCTATCTTTCTGTTCCCTCACTAAGTGAATGTTTGTAAGTGTCACCTATGTGCCAGGCTTTGTGCTCGGCACTCGCAGTACAGAGATGAAGGCTCGCTCAGTCCATGCACTCAAGGGACTCATTCTCCAGAGACTGTCTGGAGTTAAGAACTGTATTTCAATATAATTGGTTTCCTTTGTAACCTTATGTATTTTATTTCACGCATTGATAAATATTGTTCCGAGAGCTGGTCCATGGATTTCAGAAGGCTACCAAAGGTACAAAATGGTTAAGCCTTTCTCTAGGGAGATACTGAAACTAATCATCCAGTGGGATAAGTGCAGTGGCAGAGCTATTGGCTGGGAGAAGAGAGAACAAAGGGTCAAGCGTCTAACCCAGCTTGGAGGCAGAGATCAGTAAATAATGGGAGTACTTCCTGGAGAAGATGTATACCTAACCTGATTTAGGACAGACCATTTTTGGCTACTTTTTTGGATTCCATTTTCAAGTTGTTGGACTTAGGTATACAAGAAGGGGGAAAAAATCCGCTGTCTTGTTGCTTCTGCCTCCAGAGCTAGGCAGAGTCAGCAGCTTAGATAGGCTCTCCTGAGACCACTTCACTGGAGAAAGCCCAGTCATTCATCAGCTTCTCAGAGTTTCCAGCAGATGAATCCAGTACAGGACTGGACTTTAGCTGGTAGAAGGTAAATGCCCCAAACATTCCCGCAGTGTGGTTTTCACAAAGGGCTCAGAAGCAACTGTTCAGCTGTCTTACCTTGGCCATGCCCCTGTCTGGTGCGTGCCTGTTCTCTTCCCCTTTTCAGTTTCCAGGCTCCATCCCTGTCCCCTCCCCCAATTAAAACAAAACTCCCTGCCATTCCAAAGTTAAAAAAAGAAACAATAGACTTGAATATTTAGGATTTCAAGCTGTTTCATGTGAAGTTTCTTTTATGCTTCTGTCCATATTTGGGGAGGAAGACCAGAATTAATCCAGATACCCTCAAATTTAACATTCAACCCAGGTGGATTGACTGTTTAGTGGTGGCATTTTAACCTATTTCATGAAAAGCATTAAAGGTAAGTCTGCATGGTGGGAAGTACTGGTAACATTTGATGATAAAGATAGTGAAATCAAGTACAAAATATGGAACTCCTAGTTCATTGAGTTTGGAGAATGGCTCCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGTCTGGTAGGCTGCAGTCCATGGGGTCGCAAAGAGTCAGACACGACTGAGTGACTTCACTTTTGCTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGTAGCAGCAGTTCATTGAGTTATAACTGGCCCACAACTCTCAAGGAGGCAGAAAGGACAAAGAAAAGGTTGAATTCTCAAAATAGGCATGAGTTGTGATTCACTTGGGTAATGCTCCTGAGGAAATAGTCCTTTCTGAGACAAATCAGATTCTAGGTTAGCTAGCCCCTGCCTTTTCAGTCAACAACCTAGTACAATTGATCACAGACCCCTCACACCTTGGATACCTCTTCCCTGGGAAATTCTTGTGTAGTCTGTAATGTACTACAATAATAAGCAAGGCTGATGCGCTAAACAAAGGATCAGTTCCGCTAGACTAGCACTCTCTGCCCCTGGTATTCTCTTCTTAGATAGCCTTAGTTGAGTCATTTCTAGTTTTCCTTGCCAACCTGGAACACCTTTCTTAGTCCCAAGCTAGGCAATCGCGCGCCCTCTAGAAGGTTCTACTTTCCTTGAACATCCTCACCATGCTGCACCATCCTCCTTGCTTTGGAGAAACCAGTGTGACTTAGTTCCCAAATCCTGCCATGTAGTAACTCTGCCTTTCTTAGCAATAACTTTCTTATCAACAACTCAAGACAATCATTTCCTTCCAAGGAGACCCCAAGACCCAAACCTCACCGTACATCCAGAGATTTCAGTCTTCACTCTAGAACAGCCTTCTTAACTCTAGTCATCACCTGAATCGAGGCATCTTTGGGATATGCTTGTGCTCGAAGTTCCTCAGAACACAGATTCTAAAATCTATCTTTCACACCTGATCGATTCTCTACCTATGGTCCATAGCCCAGGCCAAGACATGCCTGTTTGCTGGATAAATTATTGCAGCCCAGTATGATTCTTAACTACATCTTCATAACTACCTGAAGTTTCTGTTGTGTCTATGAGGCTCCCAACCTGAAGACTCCTGAAGCCCTCTCATCC EMBV3_04083 CGCAGGAGGAGATTCGGGACGACAACCCGCACCTTTTCCTAAACCTTGCTGCAAGGCTTT Variant GeneID:515580|GRPEL1:NM_001034501:35_cdna 427^760 1 EMBV3_21841 GeneID:515580 6 GENE GRPEL1 MGC128286 GrpE-like 1, mitochondrial (E. coli) EMBV3_36573 AGCTTCAGCTTCCAGAAGGAAAAGAAATCAGGGCAGCAGTGACGGCGTTCTCCAGCTTCA Gene GeneID:533861|MAPKAP1:NM_001081603:35_cdna Constitutive 1 NULL GeneID:533861 11 GENE MAPKAP1 MGC154984 mitogen-activated protein kinase associated protein 1 EMBV3_06290 ATTAATGTCGAGCACCTTGTATGTGCCTGGGCCTGAGGACTGGAGATAAGTCAACCGTGA Gene GeneID:100140166|LOC100140166:XM_002686391:233_cdna Constitutive 0 NULL GeneID:100140166 3 GENE LOC100140166 NULL hypothetical protein LOC100140166 EMBV3_09626 CGCCGCGTTCGGCCTCCGCTGACTCTCCTGTACAATGAAGTAACTGAAATAAGCAGAACA Gene GeneID:100337193|LOC100337193:XR_083721:181_cdna Constitutive 0 NULL GeneID:100337193 7 PSEUDO LOC100337193 NULL ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3-like EMBV3_21341 GACATACTTAGAAACACTTTAGGAAAACAACAGCTCCTCCCATCTGCTGTGACCCACTTG Gene GeneID:506007|PEX12:NM_001083378:215_cdna UTR3_Alt 2 NULL GeneID:506007 19 GENE PEX12 MGC137914 Peroxin-12 peroxisomal biogenesis factor 12 EMBV3_11319 GACATCTCGTCGTCCCACCTCGTGGCTCTGCATTATGTTTAACTCCATGTATAAATATTC Variant GeneID:534781|PBK:NM_001102178:58_cdna 151^228 3 EMBV3_19753 GeneID:534781 8 GENE PBK MGC165897 PDZ binding kinase EMBV3_24962 TGTTGGCAAGAAATGTGCTGCTGATCTGGGCCTGAAGAAGGGCTATCGAATGGTGGTGAA Gene GeneID:327693|HINT1:NM_175812:25_cdna Constitutive 0 NULL GeneID:327693 7 GENE HINT1 NULL histidine triad nucleotide binding protein 1 EMBV3_17220 TTCAATAAGAAATGGATATTCTCTGAACGTCAGCTCCACGGAGCAGCGAGTTGGCGCGCT Gene BVV0101_000820 - 1 EMBV3_20846 GK000005.2:49682913-49718466 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194946 TCONS_00194952 TCONS_00194949 TCONS_00194950 TCONS_00194951 1 XLOC_117886 Coding TCONS_00194950 XLOC_117886 NonCoding Coding C5H12orf56 5:49669814-49718353 x TSS145367 277 3 0.99435493839878 0.00120683297308655 0.000161291575887122 1.69613501981227e-225 1.16157330111551e-08 0.000317913824948116 0.000207453285704444 8.44207159345391e-156 0 0 0 0 0 0 0 0 0.000234400490882409 0 3.71885628804286e-163 8.86714909147434e-133 0.000437544661687947 0.000144329722693939 4.02416736567357e-182 1.61429542210776e-05 0.000138444829408016 0.00381258739235573 0.000832277963289358 0.00102519021296708 0 0 1.25579305561777e-31 XR_231115.1 LOC101906522 PREDICTED: Bos taurus uncharacterized LOC101906522 (LOC101906522), 3e-58 228 100.00 0.451263537906137 0 noncoding 0 0 0 0 0.0470769931257535 0.649359261662766 0.0356012906333548 0.450245311420688 GTGAGCGCGCTGCTCCCTTGACCGAGCCTGGGCCTCAGAGAGGACGAGGATAAGAGTTCAGGCGAGAGACGGGTAACGGCCCCTCAGCTCCTGAGCCGCTTCGGCGCTTCTGTTCCCGCAGCTCTGACTATTCGGACCCTCAGGGCAGAGCGCGCCAACTCGCTGCTCCGTGGAGCTGACGTTCAGAGAATATCCATTTCTTATTGAAAACATCTGTTGAGCATCTGTGATCAGCCAGATCCTGAGCTAGGGTGTGGTGAAGGCAAGAAGTTCAGCC TCONS_00191802 TCONS_00191803 r 3' 681 TCONS_00194946 TCONS_00194946 s 5' 0 EMBV3_20416 ACCCCTGGTGTGCCCTCTGTGCACGCTGATGCTCTTACTGTGTTTTCTTAGATTCAGTGT Gene GeneID:788407|MGC148609:NM_001102349:257_cdna Constitutive 0 NULL GeneID:788407 16 GENE MGC148609 NULL hypothetical protein LOC788407 EMBV3_02477 GAACTTGTAAATTGTTGAATTTTTTTTTTTCCCCACGTAAGGTCACTCAGATGAAAGGGG Gene GeneID:783948|RSL24D1:NM_001080355:10_cdna Constitutive 1 NULL GeneID:783948 10 GENE RSL24D1 MGC128501 RLP24 ribosomal L24 domain containing 1 EMBV3_07536 ATGCGACAGGGGGGCTCTCCGAATCCTCAGTATCATTGGTAGGGCTCTCGAGTGACTAAT Gene BVT0102_083914 + 0 NULL GK000003.2:105305260-105416109 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27142 CTTTAAAAAAAAGTATGTAACAGAACAATATAACACAAGTGCCCAGAGTGTGAATGGAAG Gene BVT0102_324508 - 1 EMBV3_26463 GK000014.2:42189795-42269084 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01831 AATTCAGTCCAGCAGTTACTTAGTTCACAGTGGGGTCCATGATGGCGCCATGATGCCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31566 AAGAAGAAAGCAAGAATTGCTGAGGCACTGAGTAAGGTCTCATCTGGGGAAGCCACTGTC Gene GeneID:510342|IRAK3:XM_002687539:526_cdna Constitutive 0 NULL GeneID:510342 5 GENE IRAK3 IrakM interleukin-1 receptor-associated kinase 3 EMBV3_32180 CTTACCCAGAGTCAAGACAGCAAGCCTTTAACCCAGACTGATGGAGATGTTGGATGGGAG Gene GeneID:510347|MRPL15:NM_001075445:23_cdna UTR3_Alt 2 NULL GeneID:510347 14 GENE MRPL15 MGC143360 mitochondrial ribosomal protein L15 EMBV3_10000 CTGGCCAAGACACCGCTTATTGCTGATGTTTATTACATTGTTGGCGGCACATCCCCCAAG Gene GeneID:515375|NAAA:NM_001100369:62_cdna Constitutive 1 NULL GeneID:515375 6 GENE NAAA ASAHL N-acylethanolamine acid amidase EMBV3_34136 TTCCAAGAGAGAGCATCCCAAAAGAGCAAGCTTGTAAAAATTAAAATGAATAAACTACGG Variant GeneID:512187|NUMB:NM_001101951:100_cdna 179^263 3 EMBV3_23739 GeneID:512187 10 GENE NUMB MGC159835 numb homolog (Drosophila) EMBV3_30250 GTAATACCAGTGAGATTCAAGATTACTTGCAGCAGCTCACCGGAGCCAGAACGGTACCTC Gene GeneID:786967|LOC786967:XM_002694156:563_cdna Constitutive 0 NULL GeneID:786967 16 GENE LOC786967 NULL similar to Glutaredoxin-1 (Thioltransferase-1) (TTase-1) EMBV3_22954 TCACTAGCCACCTAAGGCTGAAGCCATCTCTGGAAGACAATGGGACCATCTATCAGTGTG Gene GeneID:523303|LOC523303:XM_002693092:452_cdna Constitutive 0 NULL GeneID:523303 15 GENE LOC523303 NULL similar to Butyrophilin subfamily 1 member A1 precursor (BT) EMBV3_42494 GACGAGCACCAGCTCCTGACCAACCCCAAGACCAGATGACGTGCTCCTGCATCGCACGCA Variant GeneID:520448|KCNMB4:XM_002687380:25_cdna 353^480 2 EMBV3_10798 GeneID:520448 5 GENE KCNMB4 NULL potassium large conductance calcium-activated channel, subfamily M, beta member 4 EMBV3_22864 AGGACTTGGCCCCAAAGCTCCAGCTCATAATAAAGTAATGTGTGCCTTGCATCTCCTCCG Gene GeneID:100140923|LOC100140923:XM_002707729:103_cdna Constitutive 0 NULL GeneID:100140923 15 GENE LOC100140923 NULL similar to nucleoporin 98kD EMBV3_36495 GGAGGAACCCTTGGAGTGATGACGTGTTTCAGAACGCTATAGGGGTGGTGGTCCCAAAAT Gene BVT0101_072077 + 0 NULL GK000005.2:120508026-120776793 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196767 TCONS_00196760 TCONS_00196764 TCONS_00196762 TCONS_00196765 TCONS_00196761 TCONS_00196763 1 XLOC_118444 NonCoding TCONS_00196767 XLOC_118444 NonCoding NonCoding - 5:120765587-120769329 - TSS146343 3742 1 TCONS_00196767_2 105 0.177712453233565 1 0 8.25691393444785e-05 0.000242506243741634 0.000535814392186026 0.000152860890657691 0.000101312406119222 0.000215590911076356 0.000104104793853266 0.00027912469890299 0.000395037892669538 3.38787505565448e-09 0 0 2.01485959845583e-05 3.51956971471017e-05 8.77989139201119e-11 0 0 0 7.08877475541322e-05 1.12694891535774e-25 3.52101714232022e-05 0 0 0 0.000324588170301722 0.000446223886343235 0.0001658730294149 0 0 0 NM_001038686.2 CENPM Bos taurus centromere protein M (CENPM), mRNA. 2e-09 69.8 79.12 0.0235168359166221 NM_173545.2 APLF Homo sapiens aprataxin and PNKP like factor (APLF), mRNA. 2e-09 69.8 77.45 0.0261892036344201 0 noncoding 0 0 1 0 -0.196801324615869 0.18390137237452 -0.0256449501024365 0.622229337342566 GCGGCCACATCTCTGGATCTCTTCCCTCCTGGTTGCTGGTTTTAACAGAGTGTTCACACCCCCAGGGGCGCGGGCGCTGTATTTCCTGACTGCGGAGCAGGGTGTTAGGGAAAGAGCTGCCTGCCTGGACCCGCGTTCTTTCTGGATCACTGCACCCTCATCGCCCACGCAAACAGCCCCGCACGGCCAGTCAGCTCAGCGCGGCACCGTGTAGTCAGACGTGGCGGCTGTTGGGTGCCTGGGCCCGGGGACGGCGTGCGGCCCGAAACGATCCGATCCGCCCAGAACATCTTAATGGTTTAGATTAAGTGGGCATGCGGGCCGAGCCTGCTCAGATGGCAAACCCAGGCTCGCCTGTGACCGAAAGGGACTTTCTCTGAGACCAGAAGAGGGAGAGGCTGCCCCGCCGGCCCCACAGACAGACAGACATACAAATAATTTGGGACCACGAACAAACTCTTGAAACCATAAGCCAGTTCTCTGATGCAAGTGGGAAGGACTCATGGCAGGTGAGACTTGACCTGTACTGGGTTATCAGGCATCAAATGAGAGCTCTGCGTATAACGGGTGGGGGTGTGGGGAATGGCCAAGGGCGTCAGCAGAGGGGGACCAGCATTCCGCCTGCTCTCAGCCTGCTGAGCACTGACGTCTGTGTCCCTGCCAGACTGAGTTAGTCTGAAGGGGCAAGAGGCCATCATCAGGATGCCACCCTCGTGGGGATCAAGCCTGGGGGACACGGGCCATTGCCTGGAGTCAGGGACTGCCTGCACCTTGGCCTGGGGAGGCTTCTGAGTTTGCACACAGCTCTGGCAGTTCTTAGGATCATCTCCGTAACTTCCACGACTTGTTTCATTTTACTGAAGTGGGATTCGTGTAACACGACCATTTTAAAGTGAACGGTTCGGGGGTGTGTGGCACACTCACGGTATTTTGGGACCACCACCCCTATAGCGTTCTGAAACACGTCATCACTCCAAGGGTTCCTCCCTACCCGTGCAGCTCTGACGCCCCTCCTGTCTTCCCCCAGCCCCTGGAAGCAAAACCTGCTTTCTGTCTCCGTGGGTTTGCCTGTCCTGACATTTCCCATAAATGGATTCACACAGTATCTGCCCTTTGCATCCAGCACCCTTCACTGAGCAGACTGTCTGCAGGGTTCACGGTGCTGCAGCGAGCGTGAGGCTCCATCCCTTCTTAAGGCCGGATGGTCAATCCACGCACTTCATGGACAGACTGCCTCTGTGTCCTCAGCTGAGGACCCTGGGGCTGTCCCCACCGTCTGCTGTCCCATGTCTCCCGGGTAAAGCCGAGGAGTGGAATCACTGGGTCGTGCGGCATTTCTATGTGTACCTTTTGGAAGAACGGCAACATCACTCTCTAATCCGTTATTTTCTTTTTCTTTTTTTTTAAATTTCAGTTAATCACTTTATTTGACTGCACCGGGTCCTCATTGTGGTGCGTGAACTCCTGGTTAAGCATGTGGTTTCCTGACCGGGATCAAACCCGGGACCCTGCGCTGGGAGGGCGCAGTCTTAACGTCTGGACCACCACAGAAGTCCTTACTTTATTTCTAATTTCCCTTCACTTGCTCTTTCCTTTGACAGCTTAAAAAATGGGAAGACCTTTTCAGCAAAGCAAAAGAAACAAGTCACAACTTAGGTGTGAATTAAATGCGACACATTTTAAATACACCCCAACCACGTTTGATTTTCCCCTTGTCTTTACTTCTGCATACAGCATTAATTTATCAGAAATCATGATACTGTGGCTTTGACTTGGCTTTGTCCTAAAAAGATTTCTCGTTCAGGGCCCTGGAGGCTGCCCCAAGGCCCAGAAGGGGAATCTGCTGGACACTGACCCCGGGCCTGTCGGCCTGGCCGGCCGGGCCTTGCCTTCTGCACTCCCTGTAGGTGGTGAGTCTGCTGGACGGTGGGCCTAGACACTGACCCTGGGCCTGTCAGCCTGGCCGGCCGGGCCTTGCCTTCTGCACTCCCTGAAGGTGCTGAGTCTGCTGGACGGGGTGGGGGGCCTGGACACTGACCCCAGGCCTGTCAGCCTGGCCGGCCGGGCCTTGCCTTCTGCACTCCCTGAAGGTGCTGAGTCTGCTGGACGGGGTGGGGGGCCTGGACACTGACCCCAGGCCTGTCAGCCTGGCCGGCGGGGCCTTGCCTTCTGCGCTCCCTGTAGGTGGTGAGTCTGCTGGACGGTGGGCTTAGACACTGACCCCGGGCCTGTCAGCCTGGCCGGCCGGGCCTTGCCTTCTGCGCTCCCTGTAGGTGGTGAGTCTGCTGGACGGGGTGGGGGGCCTGGACACTGACCCCGGGCCTGTCGGCCTGGCCGGCCGGGCCTTGCCTTCTGTGCTCCCTGAAGGTGGTGGTCCAGGAAGACGGGCCCTGACGCCTCCTCTTCCCAGACGCCTTTCCCCGAGCTTGAGCCTCTCTCCTCCGTGTGCTCTGCGGGCTTCCCGGTGTCTTTACGTGGCTTTGGCCGTTTACCCCGTGTTGGTGACTGCCGTCTCTGAGAAGGGGCCTGTGTCCATGTTACCGCCTGCCGTTCTTTGTTTGATTTTGGTGGGGCAAGTGCTTTCCTGTGAATCTTCTTAAAAGTATCCTTAACTATTTTAATATACGTATATTTATTTTTTCAGATTCAAAGCCACTCCTTCAGAGTGAAGACATTAAGGTCGACCTGACTGCCCCCAGGAGTTTCCTTGTGCAGCAAGCTCAGGGATTTCCCTCCAAATCCTGTGAAAGCCGCTGGGTCTCCGAGGACCAGGCCTTCTTTCAGAGGAGAGGAGCTGCTTGTCTCTGAAGCAGCTCAGCAGGGGAAGGACTATTTGCATTGGGTTTTGTTTAATTTGCCCGAGCCAAGCACACCGAGTCCATTTGCCATCACATTATCTAAGACAGCTCCAGAGCTTCTCATTCTAGGATCAATTCCATCCCGGAGTGACATCCACTTAACACCCAGGGCTCCATGCTTTTAGCTGAATAAAGGTCAGGCCGTCCACCGTCTCAGTGGCCGCCCATCATCGCAAGGGACGAGAGGCCCCCCAGGGAAGGTTAACGGATGCAAAGCTCTGGGCTCACCTCCGCAAGCAGGAGACATTTCCATTTTTACTCCGTTTGGTGGGTGGGTATTTATGCTTTTCACTTTTAACCACTCCGTTTAGGGCGTTCACCTGGGAAACACCGTCTTGCAGGGGACCAAAGCAATCCTTTGCCAGAAATCTCCGCTCTGATGATCTGCAGATGTGTGAACCCCGCGCCCAGTGGAAGTGGAGACGATAAGTTAATAGACCACAGCCCCCCTCCAGTCACTTCTCGGAACCACATGCGTTTTAATTAACCCTTGTTGATGGAACGGGGAGGGGCTGCAAGGACCCTCCTGGCGTCTCTCCCTGGGGTGAGGGGGCGAGTCTTTGGCTGTACCTGGGCCAGGAGCCGGCCTAACCCGTCTGCGAAGTCAGAAGTCCCGAGGGAGTCGTCGGTGGTCCAGGGCGGTGAACAGCTGGGGCTGAGAGCAGCTGCTGTGCCCCTGAGCTGCTGAGGGCGAGGGGGTCTCTGTGGAGGGAGGGGTTTCGGGCTGCAGCGTGGGCTCGGGAGGGACGTCGCCATGTCTGGGCTATGGGGAGGCCAGCCTTATGCTGGTGGCTGTGCCCTTGGCCTCCAGGCCCGAGCGCACTTCGGGGCAGCCTGCTCCCCCACTGCGGGGGCCGGCCCGACCGCCTGGCTGTTGGCAGGAT TCONS_00193753 TCONS_00193754 r 5' 7465 TCONS_00193753 TCONS_00193754 r 5' 7465 EMBV3_02390 AGGTGTCCCTTCAGGGTGAAAACTGGCTCCACGCCCTCAACTTGCTCTTCAGATCATCCA Gene GeneID:100196897|LOC100196897:NM_001143746:293_cdna Constitutive 0 NULL GeneID:100196897 14 GENE LOC100196897 NULL hypothetical LOC100196897 EMBV3_42037 GCAGTGTAACCACCTGCTGCCTTCTCACAGATCAAGGGAGATCAGGTTGGCTCTAAACCA Gene GeneID:529395|USP3:NM_001102123:82_cdna UTR3_Alt 2 NULL GeneID:529395 10 GENE USP3 MGC142882 ubiquitin specific peptidase 3 EMBV3_40135 GAGCAGGGCTGGGAGTGACCTCAGGGAGACCCAGGTGTAACCATTCATTAGCAATATAAT Gene BVV0102_084996 + 0 NULL GK000007.2:21748619-21870308 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07045 AAGATGTGCCTTTCAGCAAGTGGAGAGCATCCAAGCTTAGTGTCATGCAATCCATCAGAC Gene GeneID:535458|GALNT3:XM_002685331:170_cdna Constitutive 0 NULL GeneID:535458 2 GENE GALNT3 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) EMBV3_29221 GATATGGCTGGAGATCCCTTCTTCTACGAGACCTTTTATCTATCCATAGTTGATTTATGT Variant GeneID:540033|DNAJC27:NM_001098109:198_cdna 387^674 3 EMBV3_29875 GeneID:540033 11 GENE DNAJC27 RBJ DnaJ (Hsp40) homolog, subfamily C, member 27 EMBV3_23490 TCGGTCAAACTAGGCCCGAAGCTGGAGCAATACCTCTCGGCCATACAGAGATCAGAGTCT Gene GeneID:100336932|LOC100336932:XM_002683983:3_cdna Constitutive 1 NULL GeneID:100336932 Un GENE LOC100336932 NULL ladinin 1-like EMBV3_27621 ATTACAGTGTGTTATGGGCTGATGATCTTACGCCTCAAGAGTGTCCGCATGCTCTCTGGC Gene GeneID:281958|OPRM1:NM_174408:2_cdna Constitutive 0 NULL GeneID:281958 9 GENE OPRM1 NULL opioid receptor, mu 1 EMBV3_38427 GACAAATCTAAGGAGCTGCCGTTGTACTGTTCAGGGGGGCTTCGGTTTTTCTGGGACAAC Gene GeneID:527278|BECN1:NM_001033627:148_cdna Constitutive 1 NULL GeneID:527278 19 GENE BECN1 ATG6 MGC126978 beclin 1, autophagy related EMBV3_34695 CTTCTGTGATATCCCCCAGTTGCTGAAGCTCTCCTGCTCCAGTGATTACCTAGGCATGAT Gene GeneID:524872|LOC524872:XM_002697391:51_cdna Constitutive 0 NULL GeneID:524872 23 GENE LOC524872 NULL similar to olfactory receptor Olr1690 EMBV3_07100 CCTCCATGTTGAGCCTCTGTAGCTCCCTCGCTATCTCCTTCAACAGCAGCAAGCATTTTC Gene GeneID:281874|ITGAL:NM_198221:212_cdna Constitutive 0 NULL GeneID:281874 25 GENE ITGAL MGC140280 integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) EMBV3_36599 GGTCAGTTCTTCAGCTACACTGAACTCTTTTAATGCTGATGTCGAGGCTGTGACTGACAC Gene GeneID:282329|PTGER2:NM_174588:41_cdna UTR3_Alt 2 NULL GeneID:282329 10 GENE PTGER2 NULL prostaglandin E receptor 2 (subtype EP2), 53kDa EMBV3_08522 CCTGGTCTCTGTGTGGGACTACCGGATGAGCCAGAAGCTCTGGGAGGTTCACTCCAGGTA Gene GeneID:100337463|LOC100337463:XM_002694507:402_cdna Constitutive 0 NULL GeneID:100337463 17 GENE LOC100337463 NULL F-box and WD-40 domain protein 7-like EMBV3_01342 GTGGCAGGGATGAGGGAGCGAGCCAGGCATTTGTGTCAAAGAGCTTGATAGTAGGAAGTT Gene GeneID:767969|MGC133991:XM_002693865:121_cdna Constitutive 0 NULL GeneID:767969 16 GENE MGC133991 NULL hypothetical protein MGC133991 EMBV3_08670 CAGACCATGCCCATTTTGACGTTTGTGTAATCCAGTCGGAAAAGAGCCATTCACAAGCCC Gene BVT0102_257666 + 0 NULL GK000002.2:20127268-20603381 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42343 CCTCGCGACTCCCCACTGCCCCGTGGCCAGGGGGCGGGCACTGATGAAGCCTGCCTGATC Variant GeneID:282142|ANXA11:NM_174502:236_cdna 94^959 3 EMBV3_07912 GeneID:282142 28 GENE ANXA11 MGC140235 annexin A11 EMBV3_19263 GGGTTAGAGGCGCCGATCACACCCTAGAAGTCGTTTATGTCGAGCTGTGGATGTTACAAG Gene BVV0102_033641 + 0 NULL GK000009.2:12873355-12969180 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236619 TCONS_00236621 TCONS_00236615 TCONS_00236626 TCONS_00236618 TCONS_00236625 TCONS_00236622 TCONS_00236616 TCONS_00236617 TCONS_00236620 TCONS_00236624 TCONS_00236623 1 XLOC_144532 Coding TCONS_00236616 XLOC_144532 Coding Coding - 9:12945259-12947008 - TSS177097 842 1 TCONS_00236616_3 160 4 0.520594965675057 0.0347338285548978 0.0127462587310172 0.0226408755748193 0.0101300932454564 0.0138710969589621 0.0051578518938422 0.0068056968136097 0.0103052200767054 0.0104320635710272 0.000229516438855103 5.76532712200307e-05 4.65375432957236e-05 0.000423742043280916 0.00162462806038368 0.00168354511522876 5.13014633107608e-20 3.58215984745515e-16 0 0.00402723586381866 0.0051430048582517 0.00179497985383186 4.88427884387571e-05 5.04483992183e-17 0 0.0145580725064847 0.00879503762180667 0.00936532857763373 2.16633423308286e-05 3.51456878106609e-06 0 0 coding 1 1 1 1 0.48865801919507 0.0433825751299361 -0.158846585242801 0.045335433242657 GCGGGAGGGAGACCCGGGCCTGAGAGGACAGCCTTCTAGAAGGCTGGCGGCTTTGAGGATCGTGGACTCCTCCGAGCAGACCACACGGAGCGGCGCCGGAGGATGGATGCTGCATGCGAGATGCGGGATGCTGGGCACTGGAGGCCCGGGACGCGGGTCCGAGAGCGCGGAAGGGGCGGGGCTGGGCAGCCTAAGAGGCCGCGGTCGCTCCGGACCGCCCTGCCCCATGTTCCTCCCCGCGTCCCTCCGGCTCCTGGCGCTTCGTAGAGCCCAAAGGCTGAGAGGGGTTAGAGGCGCCGATCACACCCTAGAAGTCGTTTATGTCGAGCTGTGGATGTTACAAGCGTTATTTGGCCAGGACAGCGAGATGCTGGCGGCCTTCTACGGGTGGTTCAGGGTCTCCCTCGTGGTCAGCGCAGTCCCAGGATGCGGAGTCCTGGTCTTCATCATCGGATCGCCCCTTTACCAGTATGTGACCAAGTTCCTCATCGTGGCAATATGTTTCCAGCTTCGGGTCCGCCGAAATCGAGCCAGAGCTCGGACCAGACAGCTGCTAAATTCTACGCGGGCCTGGAGGCGCTCGGGTTAAGGCGGGGCCGACTCCGGCCCCCTAATCCAGAAGACAGGGAAAGCAGGGCTTGTGCGAATGTTGACCTGGAGGTCTGGAGGCTAAGGCTCCATCCAGTTCTGTTAGCACCATAAAAGATGCCGATGAGGGTAGGGATGGGGGCACCTGTTCTTAATTCTGTCCCTTTCGAGTGACTGCAAGCTCAATTTTTTAAGGAAATTTTCTATGGTTTTATAATAAATGATCTTTGTTGATTTCCTTCCTGTCAGTGTTC TCONS_00234711 TCONS_00234712 TCONS_00234713 TCONS_00234714 TCONS_00234715 TCONS_00234716 TCONS_00234717 r 5' 23594 TCONS_00234711 TCONS_00234712 TCONS_00234713 TCONS_00234714 TCONS_00234715 TCONS_00234716 TCONS_00234717 r 5' 22157 EMBV3_20433 CCATGTTAATTCAGTCTTGCGTTCCTGTGATAAGCCTTCATCTGGACATAATGTACTATC Gene BVT0101_029176 + 0 NULL GK000010.2:10484917-10549963 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012531 1 XLOC_007885 NonCoding TCONS_00012531 XLOC_007885 NonCoding NonCoding - 10:10523953-10548143 - TSS9502 1456 1 TCONS_00012531_1 43 0.688186813186813 3 0.939931373764935 0 0 0 0 0 0 2.35904419436907e-05 0 5.41885810137377e-06 6.30347786188169e-14 0.000300300261663539 1.62098451380908e-38 4.51013972236478e-05 3.07520159361221e-32 0.00013772356880312 2.76216109424039e-13 1.14021530986286e-05 2.1609077779841e-05 0 0 0 0 2.52031620922797e-05 2.67182587859131e-05 0 0 0 3.32607957155779e-05 9.10867292248665e-06 0.000462480390345047 XM_005203874.1 TARS2 PREDICTED: Bos taurus threonyl-tRNA synthetase 2, mitochondrial (putative) (TARS2), transcript variant X2, mRNA. 1e-21 109 84.11 0.0721153846153846 NR_104162.1 LOC283045 Homo sapiens uncharacterized LOC283045 (LOC283045), non-coding RNA. 8e-17 93.3 76.30 0.0899725274725275 0 noncoding CTGGCTGACTGCCTTAGAGCTGATACATTATTTATTCCTGCCTTCAAACTGAATTGAAACCTCAGTTCTTCCCCGGTCTCAACCTCCTAGTCTTCAGACTAGAACTACACCATCAGCTTTTCTGGGTCTCCAACTTGTTGAATGTCCTTCACCCTAAAGACCCTGAAAGGCCTTGTGAATTAAAATGAACGTTTCATGGGTCTCACAAGTGCCTTCCTAGGACTGTACTAAGGACTGGAATTTCCAATTTCCACACTTGATCACTGACTAGATAGAGAGGATACTGGGATATGGCAGAAAGGAAGATAAGGGAAGATGAGATGAGAGGAAAAAGGGACCCTGCCACATCTACTGCTGTGTCTATATGGAGATAATTTCATGGAAAAAAAAATGAAGAAATAGTCCCACCATCCTTTGGACACTGCTTATGATTGGCTAGTTGGAGGGCCTCTCTCTGGGGAGAGACTACACAATTACTCTTCCAGACATTCTGAGAGCAAAAGCAGGTTCACAGGGTCAGGATTCCATGCCATGCAGCATGTGGGATCTTAGTCCCTGACCAGGGATTGAACTCACATCCCCTGCGTTGGAAGCACAGAGTCCCAACCTCTGGACCGCCTGGAAAGTCCTACAAGGTCAGATTCTTTGACAGCCTGAAGAAGTGAGGGAAAGAAGTGATCATTGGAACACACAGATGGAGAAGGCTTGTGGAAAAAGCTGCTTGAGACCTCGGTTATGAACACAGTCAGCCTACATTAACAACAGAGGAAGAAGCCTGAGGAGTAAACAACCCAACCTCTCTTTCCTCCCTTACTCTAATCTCCTAAGGCTCTAAGGCATTGATCCAACTCAGTGGGAAGCCCAGTGGGCAAGGGAGCCAGGCTGGAAATTCCTCAGTACGGCATTGAAGAGGTGGTGAGTGCAGATATTCTTGCCTTTTTCTGATGTTAGGAAGAAAACAGTTCTTTCCCATGAAGAACTACTTTTTACAGATGTTTCCATCAAGTTGTATGTATTCTCTTGTATTCCTAAGAATGGATACTGTGTTTTTCCAATTCTATCATTGCATTTATTGAAATGATCATGTAGTTCTTCTTTCTTAGTTTTAGTTAATGCTGTATTATATTGTTTGATTTTCCATGTTAATTCAGTCTTGCATTCCTGTGATAAGCCTTCATCTGGACATAATGTACTATCCTTTTCAAATATTGTGGAACTAAAATAGGCAGAATTCTGTTAAGAATTGTTGCATCTATGTTTATAAGGCTATTGGCCTGTGGTTTTCTTTTCTTGCAACATCTTTGAGTTTGGGTACCAGAATAACGCTATCCTTACAGAATAAGCTGGGAAGTATTTACCTCCTTCAGTTTCCTGGAAGACTTTTGTAGAATTTGAATTATGTTTACTCTTAAAATTAAATGTTAATGTTATAAAAAAGCTGTAGTGAGTATATTAC TCONS_00012534 s 5' 1581 TCONS_00012534 s 5' 25770 EMBV3_30651 CCTCGGCCCTGGCACCTGGAGGGAACTCAGGTCCTCATCAACCTGGCGTTGCTGATACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18048 GAAAGCATTTCCACTTGGGAGCAAGAACTAGAGACTTATTTGGAGCCTGCAGCGGTGCCC Gene GeneID:506370|CYB5B:NM_001163782:126_cdna Constitutive 0 NULL GeneID:506370 18 GENE CYB5B NULL cytochrome b5 type B (outer mitochondrial membrane) EMBV3_21603 TGCCCCTCATCACTGTGTCCAAGTCAAAGATCCTCCTGGTCCTGTTCTACCCCATCAACT Gene GeneID:281172|FSHR:NM_174061:15_cdna Constitutive 0 NULL GeneID:281172 11 GENE FSHR NULL follicle stimulating hormone receptor EMBV3_30458 CACTTGGGAAAGAAGTCAAAGTCATGCAGTGCACATGAAGATCCCATGTATGACATCATT Variant GeneID:615312|RP9:XM_002686826:2_cdna 357^448 1 EMBV3_34162 GeneID:615312 4 GENE RP9 NULL retinitis pigmentosa 9 (autosomal dominant) EMBV3_22493 GCTTTGATGAGCTGCACCGGCTATGCAAAGGTGGCCCACACTGTGCACATGAGTGCTCTG Variant GeneID:505393|TOMM40L:NM_001014853:233_cdna 372^439 1 EMBV3_14739 GeneID:505393 3 GENE TOMM40L FLJ12770 translocase of outer mitochondrial membrane 40 homolog (yeast)-like EMBV3_28382 CTCGAGGCCCAGCGCAGGATTATTCAAGATAGAGTTGTAGCCATTTTCAACAAGGATCGA Gene BVV0102_420724 + 1 EMBV3_19465 GK000003.2:28768516-28823024 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169308 TCONS_00169311 TCONS_00169314 TCONS_00169309 TCONS_00169310 TCONS_00169313 1 XLOC_103333 Coding TCONS_00169308 XLOC_103333 Coding Coding DENND2C 3:28771136-28837824 j TSS126803 1926 1 TCONS_00169308_5 464 0.0358255451713396 7 0.971223776748092 0.000230625050472084 0.00051792683013247 0.000370618485463787 0.000150155426232027 8.14545857301023e-05 0.000156631648007479 7.37193947082146e-47 0.000819670304324761 0.000462936845911576 0.000792338369452283 1.92974207189402e-08 2.45558589519293e-05 0.00141443340441863 0.00306192999470295 0.00154379926630569 0.00074643947223549 0 0.000584859231034901 0.000376484989744935 8.67290926274605e-46 8.26561643019356e-86 9.14052961163128e-12 2.78920603825727e-05 0.000420539515647382 0.000407385723194628 0.00018756832597487 1.77799410778213e-53 0.00040432277305937 3.26700556166282e-05 1.36227884339721e-05 XM_005204032.1 DENND2C PREDICTED: Bos taurus DENN/MADD domain containing 2C (DENND2C), 0.0 2985 100.00 0.85877466251298 XM_005270547.1 DENND2C PREDICTED: Homo sapiens DENN/MADD domain containing 2C (DENND2C), 0.0 2051 88.83 0.820353063343718 TCONS_00169308_5 sp|Q68D51|DEN2C_HUMAN DEN2C_HUMAN DENN domain-containing protein 2C; 0.0 815 87.09 0.980603448275862 0 noncoding 0 0 0 0 0.00240257593083609 0.985587842309208 0.0585333357417122 0.313067408680315 GCAGACCTGGCGCCTCGGCTGAGAGGACTAAGCCCGGCTGCCCAGAGGCGGAGGCGGCCTCGAGGCCCAGCGCAGGATTATTCAAGATAGAGTTGTAGCCATTTTCAACAAGGATCGATGATAAGAATTTTTCTTTTTAAAAAAAGATTTTCAAGTTAAAGATGAAAGGAAAATACTGGAATTTTTCGGATTCTAACTCGTGAGATAATGAATATAGTTTTTCACAGTGACTTCTGATGGAACCTTAGTAAAATTCATTGTTTGTCATGCACCCAACTGGGAACATGGATGTTGGCTTTTCTCGTTCTGCTGTTCATACACTGTCAAGAAGCCACTGCAAAAACATCAAGCAAAAAATTTCCCAGTGGGAAGGAAGAACTAATGGTATATCTAACCCAGATAAGTGGCATGCAAAGGACTTTGGAGTGAGATATAATAACTGTAATCAAGAGAGTCTTCTTAAGAAAACGCCTATTGCTGAGGGAAAGAGCAAAAAGCTGGATGTAACCAACACTCAAAATGTTGATCAAGGTATTAATGAAGACGCCAAAAGCCACAATCAAAGTGAGGATGAAAGTGAAAAACGTGAATATGATGATACACACTTATTTAAAAATGAATCAGAACCCAACTGGGTATGTTCTCGGGTCAAACAAATTGAAAACTGGAAAGAAGTTTTAGATCCAGAGACTTCATTACCTCCAGGAAATTTCTATACCTCACAGATATTGTGGAAGAAAATAGAAGCACTTTCCCCAGATAAAGTCTTAAATTTGGCTTTGGAGCATTGTGGCTCTTCAGAAAAAGAACTGAATTTCAGAGTTCTGGATAGTTCATATGGAGTAACGAAGAGCTTAGAAAACATTTACTCTGAGCCTGAGGGACAAGAATGTGGACCTTCTATAAATCCTTTGCCAAAACCTCGTAGGACATTCAGATATTTATCTGAATCTGGCCCTATGCCATATAAAGAAAGAAACTGTGACAGAAAATACTGTGAAAATAATTCTTGTGCAGAATCTTCTTTGGCCTCTTCTCAGGAACCTGAACCAAAGAAATATGGTGGAAAAATCAGAGGGAGATCTAAAAGGAAATCCTTTGAGTTTGAGGACATTCAGCACTTTCGAAATCGGAACTCGCAGAAGATTCATGAAGAACTTGGAAGAAATTCTGGCTCAGCACTTTATTACACACAGTCTGAGGACAATATCTATGAGGATATCATATATCCTACCAAAGAAAATCCATATGAAGACATTCCAGTGCAGCCTTTGCCCCTGTGGAGATCCCCTTCAGCATGGAAGCTCCCACCCCCGAAAAGTGCTTTCAGAACACCCAAGCTTCCTCCCAAACCTCATTTCCTTCACCGGAAGACTATGGAACTGAAGAACTCACAAGCTTATATAAGGTCAAAGCTCACAAAGGATACTACATTGCCAGTCACGTTAACAGAATGGAAGCTTTTCCGAGCTGGAGAAGTTGCAAACAGGAAAAGGAAAAATCTTCCAAGGTTTGTATTAAAAATAGATGATATATTTGAGTCTAAGAGAGGGAAGAAAAAGGTAAAGTTACACCCTTACACTGGAAAAGATGCACCTCCCTCTAAAGGTGAACCCGGTGGGTACGAAAGTGATGCCGAGTATCTACCAAAGAGTGAGTGAGTCAGTGGGGCTGCTCCCTTTCGCGTGATGATCCTGGTTATAGGTGGAGTCGCACCTACCTTTGTGATGAAGCATATTTTCTACACCAAGTTTCACTTTGTCGGTGATTTCTTCATTATAAGATCCTGTTGAGATTTAGGGAACTAAACAATACACTGTCAGATGTTGTGACAGCATTAAAAATCTCCCATAATTGAGAATGGATACATGTATATGGCTGAGTCCCTTTGCTGTTAACTATCATAACATTAATCAGCTATCCCCC EMBV3_06322 TGTACTCTACATGACACGCATCCAGAAGGAGCGCTTCGGCTCCACCCAGGAGTATGAAGC Gene GeneID:504261|CAD:XM_002691500:456_cdna Constitutive 0 NULL GeneID:504261 11 GENE CAD NULL carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase EMBV3_04278 GAGACTCATTTCCTTCTAAGATGAGCATTAGCTCAGAAGTCTCTCAGCTGCCCATCCTGT Gene BVV0102_252621 + 1 EMBV3_38361 GK000005.2:86949648-87578126 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08307 AGCACTACCTGCCCGCCTGCCCGAGTTGTACATATTCCTTCCTCGGCCGCATTAACTGCA Gene GeneID:511691|DNM2:NM_001099369:23_cdna Constitutive 0 NULL GeneID:511691 7 GENE DNM2 NULL dynamin 2 EMBV3_39809 ATAAGGGAGACCAAGGAGCGCCTGGATTAGATGCCCCCTGTCCATTGGGTGAAGATGGCT Gene GeneID:613849|COL13A1:NM_001105433:402_cdna Constitutive 0 NULL GeneID:613849 28 GENE COL13A1 MGC166094 collagen, type XIII, alpha 1 EMBV3_13884 CAGACAATGAGTGATGTGCTTATCAGCTGTTCAACCAGCCATAGAGAATTTGCATCCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05715 CAGAATTCAAAGATAGTCGGACACGCATTCAAATCCCAGCTCCAGGGACTCTCTTGGTGG Gene BVV0102_190799 + 0 NULL GK000003.2:33203648-33302948 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04006 GCTGCTAGTGTACCTGGTTGTAGTTTGGTCACTAAGTTGTGTCTGAGTCCTTGCGTCTCC Gene BVT0102_117943 + 0 NULL GK000026.2:47002010-47184666 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24684 AGAAAGTTAAACACAGAGTTCCCACTGAGCCAGCAATTCCACGAATGTAGCAATTCCAGG Gene BVV0102_168452 + 1 EMBV3_42721 GK000011.2:19445399-19462108 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32452 CACCGGTTTTACACCCAGATAACCGAGTGGCGGGAGGTGATAAGTCGCAGCATTGGCGAT Gene BVV0102_201649 + 0 NULL GK000011.2:59697998-59750313 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04776 GCTACTCATTCTCATTGTCCATGTTATGGTGATGAAGGAAGGCTAGCTGGATATTTCAGG Gene BVV0102_259806 + 0 NULL GK000003.2:48410728-48451879 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173222 TCONS_00173218 TCONS_00173220 TCONS_00173223 TCONS_00173219 TCONS_00173217 TCONS_00173221 1 XLOC_104326 Coding TCONS_00173220 XLOC_104326 Coding Coding LOC614522 3:48446198-48552944 j TSS128830 6617 1 TCONS_00173220_1 220 0.0337010729938038 8 0.938086093025434 0.000181196731132144 0.000343565137426019 8.00322207534752e-05 4.22651753069218e-10 0.000501792491641855 8.80126448935145e-05 0.000129343222499327 0.000274355564142484 0.000506446697697926 8.8131238671247e-05 7.56690119062937e-12 1.02163346842757e-10 0.000127044572957526 2.05401272502349e-10 0.000226347928360964 0.000210247619956021 8.87158841626222e-20 1.0462909042339e-09 5.67974268001254e-05 0.000167113430849104 3.88309601308656e-05 2.61127583679705e-05 5.40267290208121e-10 8.04763208281058e-10 0.000260181691514214 0.000428249932453448 1.61412868589672e-06 7.28048070377759e-10 1.4883852831802e-05 2.13808207698679e-08 XM_005204363.1 LOC101903062 PREDICTED: Bos taurus transmembrane protein 56-like (LOC101903062), 0.0 4601 100.00 0.385371014054708 NM_152487.2 TMEM56 Homo sapiens transmembrane protein 56 (TMEM56), transcript variant 0.0 2452 75.75 0.550400483602841 TCONS_00173220_1 sp|Q96MV1|TMM56_HUMAN TMM56_HUMAN Transmembrane protein 56; 8e-109 318 62.36 0.995454545454545 1 noncoding 0 0 1 1 -0.705764296933586 0.304819358025957 0.0235602375375345 0.75996591509869 CGCGGCCCCTTTAAGGAGACGCTCTGCGGTAACTCGAGCCCGCAGTCCGGGCGGCCGCGGCGGCAGCAGTAGCCTCCGCTGCTGTTCCAGCGGCCCGGAGCCCAAGGCTCCCCTGGCTCCCGCCGAGCATCTCGCGGGACGGCTCTGGCCGGCGCCAGCCCTCGGGCCGGGCCGGATGACCAGGCTCCTGTAACCACCCGCCGCCCACTCCCGGCCCGGCTCACTGCCGCCCGCGCGCGAGTCGCCCCGGGACCCGGCACAGGTTGAAGAAATATGGATACCAACACCATACTGCTCATCAGCACTTGTTTTGCCAGCTTTTTCACCTTTCAGATTATTTTCCACGTTGTAAGTTACTGGTTTTCAGCAAAGATTTCTCCAGGTTTTAATAACCTCAACTTCAAAAAGAAGATTGAATGGAACTCAAGGGTGGTATCTACGTGTCATTCTTTGGTGGTTGGGCTTGTTGGCTTGTACATTTTCTTGTTTGACGAGGCTGGTATTGCTGATCCACTTTGGGGTGATACATCTCTTGGGAAAGTGAATGTTGCTATTGCTTCAGGCTATCTCGTTTCTGATTTGTTGATTCTCATTTGGTATTGGAAAGTGATTGGTGATAAGTATTTTGTAATTCACCATTGTACAGCGCTGTATGCATACCACTTTGTACTGAATGATGGTGTGCTGGTGTATGTTGGGAATTTCCGCCTGCTTGCAGAACTTTCCAGCCCTTTTGTGAATCAGCGGCCCCTGGGAATAGATTCAATGGCCTTGGCTTGGATTTTAATTCAGTTTTCCTGGATTTCTACTTGTGTGGTTTTGGATGTGATGAATGTCATGTGGATGATCAAAATTTCAAAGGGGTGCATCAAAGTCATCTCTCTCTTAAGACAAGAGAAAGCCAGAAAGAGTCTTCAGAATGGAAAACTTGACTAAAAGCGGGCTATCGATAAGCATACTTCATTACTACCCACAGTGTCTCTTCTGATAGGATAAATTCTTGGCATGTTCTTGTGCTTCTTTATTAATTATACTTGGTATTCATACTTTCAGTGTTTTTTTATCTTAACCATTAGAAAAGAGAAACTAAAACAGTTTTTTTTTCCTCAAGATTTATTTTCTAATTTTCTTCTGCATTATAAGCATGGATAAAATCTTAAAGATTAAAATAAAAATGTATAAATATTGATTGTGAATCTTTTTGGAAATCTGTTCACTGGCATTGGTACTTTTCTCTGTGAAAAGATGACTATGCTAATTTGGTGCACTTGGTTTTATGTCACTGATTTTGCTGAGAGAATGGGAACTGCCTTTAAGTCTGTAAACAGCTCTCCACATTCTGATGCACTGTGCTTATTTCTTACTATGGCTGTCAATTCCTGAAGTAGAGTTTGGTTTCCAAATTATTGAAATGTTCTTTTTCTTAGACTATTAGATGTGATGTCTTTTTCATTTCAATTTGCTATCATCTACTAATAATGAAATATTTTGCTTACTTTGGGAACCTCTAATTAGTTTTCATGGGAAATATCTCCTACAATTTTGGATTTTTCTGACATTATTGTATCTGTTTTTAACATTTTATCAAATTATTGCTTTTTTCTTAAATAGGAAAGCTTAAGACCAATCTAATAGAGCTCCTTAAGAGATGAATTCTTCCTACTAAACACGCATGTTCTAGATGACTAGTTAGACTAATACGAGGAGTCATTAAGAAAAAGGCTTTAACACTGCTGTCTCTATCTGCTTCCCTTGCATTTTTTTCTTTGAAAACTATATTATTTCTATTTTCAAAACCTCCCATGAGTTCTGAACCCAACATCTTTTAGCACCATAGTCTTGTGCAATATATATTTATCAGGCTCCTAAAGTAAGCCTCTTCTTGATGAGACCAAAACTGCAAAAACTAAATAAATAAGTCAGTATTCATATTTTACTCACAATTTACACCCATGCTTGCTAGCATTTTGAGTGCTTTGATTTTCTGTTTTTCTTAAAAGACAGGCAAAAGATAGATAATTTAATCTAAGTATTCTGATTATCAATATTATTATTTTATGTGAGGATAAATGAATGGTGACTTTTTTTTCTGTTTGTGTATGTGGGTATATGTTTGCTTTTGTTTTGGTCCTTACAACCCAAATATAAAATAACATAGTTAGCTATTATTGTCTTTATTATTGTCTTTCTTTTTCTCAAGTACTTGACTTTAATGATCATTCTTACCTAAGGAAAAAAATTAATCAATGGAAAATACTTGAATTTAATTGAACCCAAACCAAAAGATCTAATCCATTCAGTTTCTCAGTTTGAATGAGAATGTGCTACTCATTCTCATTGTCCATGTTATGGTGATGAAGGAAGGCTAGCTGGATATTTCAGGACTTTTGATTTAATGTGATTTGATTTGACTCAGCTGTCCAATGCAGATAGGGCCTGATAAGTTATAGAACATTTAAAGAAGGTAATTGAAATCTCAGTCAGTAACTAAATGATAAATTGAAATCGATTGGCTTATACCAGTGCACTTATTTTTGAAAGGCTAAAAGTAATATAAAATGTAAGTATTTGTTTTCAGATTTACTAATATTACATTGATAATTTGTTATTAAATTTAGTCCCTTTTACACATAGGCACTTAGACATGTATTGGTTGTTTAGAGGGAGTATGAAAGCATGTGGTTTTATCTTGTTCCTTTCTTGCTCTTTTGCAAGAAAAATGGCTTTCAAAAAGGAAAACACTTATATTAGAAAGCTATTTTGGAAATTCATTCCTTTAGAAAGAAACAAAATGTGAAATAAATAATTTTGACTATTCAGATATTTCTGTGGTTTCTGAACACAGATTTTAAACCCATCATCAATATGAAGAAGATATAATGCTATATAATATGAGTGAGTTTCCATATAGCAATTTCAGTTTTTACAGTTGTTATTTCATGCTTAAAACTTTATTTTTACTTTCACCAACAGCACCTTTCAGTAGTATAGCCCCTGACTAAGTAAGAATAATTAAAGTATCAATGTGTTGAACTGAAGTTTGTTATTCCCTTAGTCAGCAATTCTTATTTTATGCTGGCTGTATGACAGATAATTTAACATTCAGATTAAATATCCAAAATAGATTCTACGTACTTCCTCATACAATAGATATGAAATGAAAAAGACACTATAAGCTGCCATGCTACTTTAAGTCAGATCTTTACAGGAGCTATACTTTGCTGTTCTGTGATTTTATCCACCTGCCTAAGATACAAGTAGTTAAAGACAAAACATTTCATTTATTAAATAATGAATTTTTCATTTATTAAATGACAAACTTTTGCTAGACATTTTACATATTAAATATTTTGACTACATGGATTAATTTAAATGATTCTATTGATATTAGACATTCTGATATTAAACAACTGTTAAAATATTTATAGAAAATGAAAACAAATTGGTATAAATTTTTAAGCAACTCTATTTTTGTAGAAAAAAGTTAGTGACAACCTGTAACTATATAAATGTTCTCTGAACATGTAGTACTCTAGAAAATAAAAAGTTCATTCAAAAATTTGAAAATGAGTAAAAGTCAACTAAATATCATGCAAGATCATAAACTCTGCATTAGATATTTTATTGGGGAGAATTTAAAAACTATGAGCTTGAGTTTATAGAGTCTGCATTATTGTGTCTAAAACCTTTTTAATGAATATCATTTGCATTTATTTAAATCTCAGTATGAATCTGAGTGCTGAGAAATGAATTCCTGCTTAAATTGTGTCTTGATATATCATAGTAAGTTGAAATTCAATATTTATTCCAACTGTTAGTTTTGTTATTTTATGGAGTAGTCTTTGTTCAGAGAAATAATGATGTTTTTATCATTCCTAAGGGTGGCTCATATACTGTGGATGACCCAGTACTGTTGTAAAGGTCTAGTTTAAAAAACTGCCTAATTTATAGGTGTTTGAATCAAATTCTTTTCTAAATTTTAGTGACCTATTTGACTCAAATAAAAATTTTGCTGAAAGTATCAGTTTTTAAATTATATATTTTCTCTGAGGTGCACTAGGCATTTAAAGAGTGGTTCTTCCCTGTATTGTTGGGTACACCAACATTGTAATCATGTGTTTAGAAATATTCTTCTCATGGAGATATATAGGGGGGAAAGTATGTTGTAATATTCATGTTTGTTCTACTTCAGTTTTAAGGAAAATAAACATGTTCCAAAAGACACTACTAAAATAAGTGTTTGAATAAATTTCAATTTCTAGGTTTCTCTTCACTCCAAATACGTAAATATACATTTCAATTGGCTTTAAGTGGTTTAATCTGTTAAATGAAATTTGAAAGTCCATGTCATTGTTGACATCATCAATTATACTTCATAGAAAATTATGTATTTATGTGTTTTGGATTCTATAAGAAGCAAACTGGTATAATGTTATCATAATGTGGCAGAGTATATCTCAAAAGGTGCAAACCAGTATAGCCCGGAGACCCTCCTGTGATGAGAGGCCCCGGGCGCACACACACCTTCCTAGCCTTAACCACAGCTGGTTAATGACAGACACACTAAGGGTACTGAAAGCAAATTCTGACTTAAAATGTGTGATATTAGTGAGGACAAGGAAAAGCCAGCAAGACCTAAGGTTGGAGGAGATAGTATGACTGCTTTGCCCTTAAAAGCCATGATGTTCCTCCCTCAATCCAAAAGTTTTCTCTCTGAATATTTTGAGCCCTTCCCTCTCATCAGCACCTCTCTCCTTTCTATACCAACTTTTGAGGCCTCCCCAGGTGGTGCCAGAAGTGAAGAACCTGTCTGCCAAGGCATGAGATGTAGGAGACATGGGTTCCTTTGCTTGGTGGGAAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGATAGAGAAGCCTGGAGGGCTACAGTGCATAGGGTCACAAAGAGTCAGACATGACTGAAGCACATTAGCATGTGTGCAAATGTGTAAGCTTCCCAGCCCCTTGTGGCAAATTTAGACGTTCATTAGTATCTTCTTTCATTGGGGGAAAAAAAAAACATTGCTGTAAGCTTCAGTAATGAATAGACAAGCCATAATTTATTAAGAGGCTACAGGAAGCCATTTAACATTTAATAATACTTATTTATAACACCAAGCAAAGCTTATAATGTTATAGTTTTATTGAGAAACATCTTTAGGTGTCTTTTCCTTAAACTGGTTTAGCAATAAGAGCTTTATAACATGTTTCAGCTAGGGATTCACTGCAGGCCCGTAAATTATCTAAATGTTCTTCTTTAGACCCTCTGACAGGTGAGGGAGGAACTGAGGTAGTTCTGTGTTATGAGGATGTTATGAGGAGGGTGTGCTGATATGTTGCAGCATTATTGAGTCTTGCTCTTTAATCAAGCAAATGTAGTCACAGTCCTGTTTCCTTCAAAAGTGAGCGTATTGTGAGTGAATTACTCAGGGTGTTTTCCAAAGTACAACACCCAAGGATTTGAGCCCTGTCTCTTTTTAGCCCAGACCTCAAACTACTGCTTTGTAAGGTCATACCTTTCTTGGAAGATATTTTGGCAGTGAAACTAAAGATTGGTTAGTTTGCATAGAAAGTGTTTACACTGATTCCCTCCAAGGAGTAGACAGTTTTAAAATCTTAAAGATAAAAATACCTCTGGCTGAAAACTCGTTAATTGTCATCTGCATGTTTTTTCTTTTATATCTTTATGTAATTCTTGCTGTAATTATGCATTAAGGTATTTGCTACTTGTTGGTTAATGAAGCACTAAAAATATAACTAAATAAAATGTGCTATGTATTTTTCTGTTTCTTGCTTGGTTTGCTTCTAGTATGATTATGTCTACTTTTTACTCAAGTACTTTTTGCACAGATAATACTATCTTACTAACGTGTACCTGGGATGAGTTATGAGACTATTTTGGTAATTATTTGATTTTGTAATAATAACTTTTTGACATAGATTTAATTTGAAGAAGTTACTTGAAAACTTCAGTAGATGTGACATCTATTGTGATATACAATTTTTCTCTGAGAATATATCACATTAATATATAATTGTCAAAGATTTTAGAAGTCTTTCAAAATACATTTATTAACATTTTGAGAACACACCTTCTAATGTATTTCCATAAAGCTGAAGAACTTTTATTTACAGAATGTGTAAGACTTGGTAATTTACAAATCAATGTTACTCAGATTTATCAGCAATTAAAATAGCAATTTAGTGTTCTTTTTTGTTTCTGGTTGTGCTTTAGAGGGGTTTCTGGACATCTTTGTGTATTTCCCTTAAAAATTTGGAATGTTTGTATACTTAGTATGTGTGCCAGTTTAAAGTAAATATATGCAAGTTATAAGCAATAATCTGCATGTTATACAGGGTTGGCATTTCTTTGTCATGGTAATTTTATTATTTTAAGAATGTATAAAATCAGTATCCTTATCAATATTTATATATAAATCACTTCTCTCCCCCAATAAAAAACACTGGGATTTTCTTGTGGTAGAACACTAATATAATGTGGTGCAAAGCTTTGTATTTTGTGAAAAAAATAAAATAAAATCACAGTTATTTAGTGGAAAAG EMBV3_37354 CTGGCTCGTGCCCGGCCTTCATCTCTCGTGTTCTGGGGTGTCGTTATTTATTATTTCACC Gene GeneID:100336626|LOC100336626:XR_083694:159_cdna Constitutive 0 NULL GeneID:100336626 5 PSEUDO LOC100336626 NULL bromodomain containing protein 1-like EMBV3_38658 CAGCTGTGACTTACGGACAGGTGACAGTGATGCAGGTTGTAGGCCATAAAGAAGGTCTGG Gene GeneID:100336369|LOC100336369:XR_083564:2_cdna Constitutive 0 NULL GeneID:100336369 X PSEUDO LOC100336369 NULL membrane-associated ring finger (C3HC4) 5-like EMBV3_22469 TGGATTTGCCAATAGGGAGCAGTAAACAAAGCGGCTAAGACCACGTCAGACAAAAGGGGG Gene BVT0101_010621 + 1 EMBV3_30978 GK000008.2:112214587-112239719 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226633 TCONS_00226636 TCONS_00226639 TCONS_00226637 TCONS_00226634 TCONS_00229130 TCONS_00226638 TCONS_00226635 2 XLOC_138053 XLOC_138660 NonCoding TCONS_00226637 XLOC_138053 NonCoding NonCoding - 8:112228267-112230785 - TSS169403 1571 1 TCONS_00226637_3 65 0.415658816040738 3 0.377036154151768 0.000219682649821377 0.000152569154046805 0.00059727519604274 0.000449888482107027 0.000231759024506011 0.000120676908972633 0.000266843112529465 9.69863253018525e-05 0.000228503891603506 1.21374347590355e-18 0 2.65905602165437e-14 1.80731520771013e-16 1.46003577880098e-18 0 0 0 0 0.000453828598231603 0.00123327422110278 8.34428973591035e-21 0 0 3.97008498019855e-17 0.000130509188399902 7.57203886800771e-09 0.000958564553797215 0 0 0 XM_005200861.1 GYG2 PREDICTED: Bos taurus glycogenin 2 (GYG2), transcript variant X1, 2e-89 334 85.37 0.178866963717377 0 noncoding TCACCACAGGACTGTCCAGGACGTCTCTCCTGCTCCCCTTACTCTCCTCTTCTCACTGCCGACCTTAGCCCTGGAGAGGTCAGAGGTGAAGCCACTTAACCATTGCCTGAACGTTCAGCTGTGTCTCAGGCTTCACATCCTGACCTAGCGGAGATCTGACGGCGCCTCACAGCCACAGGTGGAGGGACTCAGTATCCAAGCACCTTTCCTGCTAGTCACTATGCCTGCCAGTCAAGCTCTGCACACGGCTGGCTTCCTTCTAGAGTCTGGGTTTCCCTCTCTGTGTGTTTCTGTCTTCTTTTAAGGACCGCAGTCACATTACAGGAGAGACCCACCCTCCTCCAGTGTGTAAACGGCGCCTGCAGCAGCCTGAGCCAAGAACCCCGAGTGAAGCTCGAGTCCTCTGCGCTCAGCAACCCCGTCCCAACACCTTCAGCAAGCTCTTTCAGCCCTAGCTCCAAAAATATCCCGGACCCATCCGCGGCTCTTCATCTCCACCATTCTGGTTGAAGCTGCTTGCACTTCTTGCCAAGACAGCTGCAGTCGCCTGAGCAGGTCTCCCTCCCTGCCCCCTTTTGTCTGACGTGGTCTTAGCCGCTTTGTTTACTGCTCCCTATTGACAAATCCAAACACCTCACTCATGCTTACAAAACCCCACTGATCTGCTCCCTCCATCCTCCGACCTCATTTCCCGTCGCTCGCTTGCTTTGATCCGTAGCCTGCTTGCAGTTCCCTGGGTCACCGGCCTCCTTTCTGGAACGATCTCCTCTAGGTCTTTGTGAGACCACCCCTTCTTGTCTGAGACGCTCAGCTTAAACGTCATCTTATTTAGTGACGTCTAAGAGAACTTCCCCAACCGCCCCATCATCAAACCAGTCAATCCAAAAGAAAATCAACCCGGAATATTCACTGAAAGGACTGACGATGAAGCTGAAGCTCCAATCCTTTGGCCACCTGATGCGAAGAACTGACTCATTGGAAAAGATCCTGATGCTGGGAAAGATTGAGGGCAGGAAGAGAAGAGGGTGACAGAGGATGAGATGGTTGGATGGCATCACCGACTCGATGGACATGAGGCTCCAGGAGATGGTGGAGGACAGGGAAGCTGGCGTGCTGCAGTCCCTGGGGTCGCAGAGTCAGACACAACTTAGCGGCTGGACAGTGACCACAAAGAGAACCCCGACCACCCCATCGAGAGCAGTCACTTGGTTTTTCTCCATTGCTGACCTTTAATTCCCTGCAGAGAATTTAGTAAATAGATTATTTTTCTCATTTATGTGGATATTTATTGTCCTTCTCCCCAGAATTCCTAGGAAAGCAGGGACCTTGTTTATCTTGATTACACCATCTAGAACTGTGTATGGCACATAGAAATAACTCCGTAAATATTTACTGAATAAATAATCCTGCATAGACGATCTTTGTGTATGAACTTTTTTCTCCCCCTACTTTTGGGAATTTATATAAATAATCCAGCAGGAGGAAGATTACTGGATCAAGGGATGTAAACATATCTTGGCTCTTGGAATGTATCGTCAAATAGGTTTGCCAAGATGTTGGGTCAGTGTTCA TCONS_00229131 TCONS_00229132 TCONS_00229133 TCONS_00229134 TCONS_00229135 TCONS_00229136 TCONS_00229137 TCONS_00229138 TCONS_00229139 TCONS_00229140 r 3' 8749 TCONS_00229129 r 5' 10111 EMBV3_00369 CCAGAAAGAGTCCTTCACCAGACAGGTGTTATGGAAGCTGCTGACGCTTGTGAAATTCGG Gene GeneID:616091|MGMT:XM_002698584:168_cdna Constitutive 1 NULL GeneID:616091 26 GENE MGMT NULL O-6-methylguanine-DNA methyltransferase EMBV3_06715 CTAGCAGTAGTAGCCACTCAGTTGTGTCTGACTCTTTGCGACCTCATGGACTGTATCGAC Gene BVV0102_240858 + 0 NULL GK000005.2:22088782-22333868 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194105 1 XLOC_117672 NonCoding TCONS_00194105 XLOC_117672 NonCoding NonCoding - 5:22291130-22292965 - TSS144923 1835 3 TCONS_00194105_3 63 0.24141689373297 1 0 0.000481942348206776 0.000188905450571702 0.000273650149915127 0.000111030854965602 0.000158639046834121 0.000163835412106399 5.78461798321114e-05 7.91541278873234e-11 2.5797579001359e-05 5.17405968081528e-11 0 0 8.28731527193034e-05 8.55026757198824e-11 6.49443107097824e-11 0 0 0 0.000181798295538438 0.000505294075403542 8.56750320731992e-06 0 0 0 9.28002855039177e-06 1.09158259955437e-10 3.2786692684022e-05 0 0 0 XM_005194907.1 LOC101909522 PREDICTED: Bos taurus rho GTPase-activating protein 30-like (LOC101909522), mRNA. 1e-22 113 87.76 0.0523160762942779 XR_253095.1 LOC101930023 PREDICTED: Homo sapiens uncharacterized LOC101930023 (LOC101930023), misc_RNA. 4e-34 150 81.65 0.085558583106267 0 noncoding 0 0 0 0 -0.991453657738392 0.0307668947969435 -0.299671831624642 0.00219699055825003 CATTCCAGTATGCTTGCCTGGGAAATCCCATGGACAGAAGAGCCGGGTGGTCTATACAGTCCATGAGGTCGCAAAGAGTCAGACACAACTGAGTGGCTACTACTGCTAGAACTCAGTCACATGCTGCTCTGAGTGGAAGGAGAGAGAGGACTGGAAGAAGATAACAAAAGAGAGGATCTGGGACAAAGTGGAGGAGCTTCAGAAAAGAAAAGGGTTGCTTCAGATTTCTGGTCCCAGTTGCTGTTGCTGGTTGCCGCTGAATCAGGGAGCGACTCTGGAATATGTGCATCTGCCCTCTAAGAAATCAAAGCCAGACACAGGAAGTGGCTGGAAGAGCCTCAGCCACACGCCTTCCGTCTGCTGTGGACGCAGCAGCTGCACAGACCCCTCTTGTTGAGAGACAAGACAGGATCCTTTCAGTCCCATGACCTCAACCTCCTCTCCAAGGGGAGAGAAGAGGGAGATTGAAATTCTTCCCTGTGACTGAGTGCACGAGAATATGACAATTATTTAGGGTAATAGGTTTCCTGAGGGCCGTGGCAGCCAACAAGGGTGGTTGTGTGGAGCAAGCACCCCCCGGCTTGTGTCAGGAGAGGGGACAAGAAGAACCAGGAGGCAGGCTTGGTTCATTCCCTGATTTGCAGAATAGGAGTGAGGGGAAATCGCTCAGTGGCATTCGACTCTTTGAATACTTCTGAAAGACAGAGAAGGGGATTTTCAGGGTGTCCAAACCTCTGCCGTTTGAATTGGATTCAAGGTCAGCTCTAACGAGGTGTTCACTTTAGCCGCAAATGGACGAGGTCAGCGTGACTGTGAATCAGCTGCAAAGATAAAGGCTTACAGCCAAGCCAGTACGAACGTTATTAGACCCAAGTTGCCACCATTACAATAGATATGGAAGGAAAGGAGACATGTGAAATGGAAGGAAGCGGGGATGCATATGCTTTGGACAGGATGTATCAACTAACCGAGCCTGAGATTGTGATGAACAGTTTAGGCTCATTTGAGCTTATTCCCAGTAAGCTCATTGTTTGATGTTGAATTGGGCTCTGTCAGCTACTTCAGCATCATCTCACATCTCCGTACATAATACCACAGCACGTATTTGGAATACAGGGCCAAGTCGGTTTCCTTCTGGCAGGTTATTTGGTTTTCTTCCTCAGTTAATTTTGAATGTATCTCTTTTGACGGACTTTATTGAAGCCTTACTCTATGCCAAGGTATGATAAGCACTTTATATGGCAATATGATATCATAGTTCTTAAACCACAGGCTTTAGAATCATTCTGCCAGGTTCAGATCTCAGCTTTCTCTCTTTGGGCAAGTCACCTAATCTAGTCTAGCTTCAGTTTTCTCATATGTTAAATAGGAAAACAGTAATAGCACTTGCCTCATTGGACTAATATGAGAGTTAACTTATTCATGTGACATTCTTACTCTGGTGCCTGACACATAGTAAAGTGCTCAATGAATGTTACTACTGTCCTGAACCATTGTTTTCACTAAGTACGTATTGTGTGCAAAGCAGAGAGAGGAATGAGACTGAGAAGGCTTAAGTTCTAGTTCAAAGTTACATGATTTGTAAGTGGAAGGGAGGTTGAAGATTCAAACTCAGCACTGGAGGTGGAGTCTGTCTTGTTCAACACTACACTTGACAATCTCTACCAGTCACTTTTTTTTTTTTAATTTGGTTATTTAAATCTGCGTCTCCTTCTCAAAATGATTACCAGTTCGTCCTATGCATAATTTATTCTCAAATCTTACACTTTTCTGCCCCGATTTGATTCCTCGTCTCAGTTTGCAATTTTACTGTTGTGTTTCTGCCTTGTACTCAC TCONS_00191002 r 5' 40904 TCONS_00191002 r 5' 40904 EMBV3_02406 AAAGGTATTTCATTTGCTTATTTTAGTACTCTGAATTTACTTTTACAATTTTCTATAATT Gene GeneID:100336844|LOC100336844:XM_002697723:48_cdna Constitutive 0 NULL GeneID:100336844 24 GENE LOC100336844 NULL oxysterol-binding protein-like 1A-like EMBV3_13248 ACATTGATGACCTTAAGAAATTTCTAAAGCAGCGAAAGCACAGCATTTCTATCAACTTAT Variant GeneID:532844|ATP1B3:NM_001035393:51_cdna 511^746 2 EMBV3_21542 GeneID:532844 1 GENE ATP1B3 MGC127417 ATPase, Na+/K+ transporting, beta 3 polypeptide EMBV3_07197 CGGTAGCCTGGGGCACCGTGTCAGGCATTGCTGTGGAGCGAAATCAACGGCCTGCTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16879 AAGCGTAAGAAGTACAACGTGCCTGTCCAGAATGACGTGGAGAAAGTGGTGGTAGTAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41464 GTGACAGATAGATTCTTTACCACTGAGTCACCAGGGAAGCCCACAAGACAGGCTAAACCA Gene GeneID:534212|NCEH1:NM_001123034:31_cdna UTR3_Alt 3 NULL GeneID:534212 1 GENE NCEH1 AADACL1 neutral cholesterol ester hydrolase 1 EMBV3_33419 TAGGAGGGCTAGGAGGTCCGGGGAAAACGAATGTACCTTTCTCTCTCGGTGAAGGCGATG Gene BVV0102_285454 + 0 NULL GK000003.2:51074026-51104163 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15914 GCTGAAGCTCACTGAGACGCAGGTGAAGATCTGGTTCCAGAACCGTCGCTACAAGACCAA Gene GeneID:616907|NKX3-2:XM_002688460:22_cdna Constitutive 0 NULL GeneID:616907 6 GENE NKX3-2 NULL NK3 homeobox 2 EMBV3_29313 CTACTTGAGTCGTGGTTAAGTAGAGGGTCAGGGAACGTGGGTGAGAGAACAACCAAAACC Gene GeneID:504483|BLMH:XM_002695678:204_cdna Constitutive 0 NULL GeneID:504483 19 GENE BLMH NULL bleomycin hydrolase EMBV3_25830 GCAGAACCAGATCACGTTGGCATTCTGATTTCCTCCAGACTGGCTTCCATGCTTCAGACT Gene BVT0102_171267 + 0 NULL GK000030.2:141007094-141044354 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248564 TCONS_00248565 TCONS_00248566 1 XLOC_151635 Coding TCONS_00248564 XLOC_151635 Coding Coding TLR7 X:141042147-141048109 o TSS185869 5769 1 TCONS_00248564_4 1055 0.0610157739642919 2 0.0325448750209696 0.000268712276548935 0.000264908411866137 0.000427566111473527 0.000218675219749212 9.89836711473245e-05 2.03951125926618e-09 0.000240584307432709 7.86237236866341e-05 0.000183911929513661 2.76104859764187e-05 4.44849125914166e-07 0.000106177434064739 1.35361191494402e-05 0.000232438275383055 6.44970400914298e-05 1.50819448101633e-08 0 0 9.58107215196895e-05 0.000922009455562485 0.000111282077915988 4.30055739101075e-09 2.06456551643429e-05 1.49408130771866e-11 0.00084584310322463 0.000304816937959578 0.000244311922227455 2.80961090344044e-06 5.3027142504507e-12 1.77093785507705e-11 XM_005228486.1 TLR7 PREDICTED: Bos taurus toll-like receptor 7 (TLR7), transcript 0.0 7537 100.00 0.724215635292078 NM_016562.3 TLR7 Homo sapiens toll-like receptor 7 (TLR7), mRNA. 0.0 4138 85.38 0.62489166233316 TCONS_00248564_4 sp|Q9NYK1|TLR7_HUMAN TLR7_HUMAN Toll-like receptor 7; 0.0 1804 86.46 0.993364928909953 7 coding 0 0 0 0 -0.0951175449880519 0.476433114809875 -0.0180070991495819 0.718919042499201 ATGTGTAGGGAAAATGTTCATCCCCAAGTCATCTTGGAGATAATTTCCAAAAATAGTCCAAGAGGAAAATGGGCTTATAGATAGCAGTGCCAAAATATCAGGAGTTGGGTGACCATAAACAGATCAGTTAATATCGCTGAGCTGTGTCTCAGTCTGCAAAGTGTTTCCCTACTTAGCATATTAAGAAGCTCAGATGTGGTAAAGGACTCTTGTAATGTGTACCAGGTGGGCTTAACAAGCAAATGTTAATTGCACTAAAGGTTTTCTTACCAGATGTAGTTGCATTTCAGACTTTGGCAGCATGTTGACGGCTCTTTCATTGTAACATTATAAGTAACAGGGAATAGGAAAATGCTGCTTCCCCTATCTGAAAAGCGATATAACAAAAGCCAAGATGCTGAAAGCGAAATATGTGTTTCCAATGTGGACATTGAAGAGACAGTTTCCTATCCTTTTTAACATGATCCTAATTTCTGGACTCCTTGGGGCTAGATGGTTTCCTAAAACTCTGCCCTGTGATGTCACTCTGGATGCCCCAAATACCCATGTGATTGTGGACTGCACAGACAAGCATTTGACAGAAATTCCTGGAGGTATTCCTGCCAATGCCACCAACCTTACCCTCACCATTAACCACATAGCAGGCATCTCTCCAGCCTCCTTTCACCGGCTGGACCATCTGGTGGAGATCGATTTCAGATGCAACTGCGTACCTGTTCGACTGGGGCCAAAAGACAACGTGTGCACCAAAAGGCTACAGATTAAACCCAACAGCTTTAGCAAACTCACGTATTTAAAATCTCTTTACCTGGATGGAAACCAGCTTCTAGAAATACCTCAGGATCTTCCTCCCAGCTTACAGCTGCTGAGCCTGGAGGCCAACAACATCTTTTTGATCATGAAGGAGAATCTAACAGAACTGGCCAACCTAGAAATACTCTACCTGGGCCAAAACTGTTACTATCGTAACCCTTGTAATGTTTCATTTACTATCGAAAAAGATGCTTTCCTAAATATGAGAAATTTAAAATTGCTCTCCCTAAAAGATAACAATATCTCAGCTGTCCCCACTGTTTTGCCATCTAGTTTGACAGAACTCTATCTTTACAATAACATCATTACAAAAATCCAAGAAGATGATTTTAATAACCTCAGTCAACTACAAGTTCTTGATCTGAGTGGAAATTGCCCTCGTTGTTATAATGTTCCATTTCCTTGCACACCCTGTGAAAATAATTCTCCCCTACAGATTGATCCAAATGCTTTTGATGCATTGACAGAATTGCAAGTCTTACGTCTACACAGTAACTCTCTACAGCACGTGCCCCAAAGATGGTTTAAAAACATTAACAAACTTAAAGAACTAGATCTTTCCCAAAACTTCTTGGCCAAAGAAATTGGGGATGCCAAATTTTTACATCTTCTTCATAACCTTGTCAACTTGGATCTGTCTTTCAATTATGATCTTCAGGTCTACCATGCAGTTATAAATCTATCAGATGCATTTTCTTCACTGAAAAAATTGAAAGTTTTGCGAATCAAAGGCTATGTCTTTAAAGAGCTGAATAGTTTAAACCTCTTCCCATTACATAATCTTCCCAATCTTGAAGTTCTTGATCTTGGCACTAACTTTATAAAAATTGCTAACCTCAGCATTTTTAACCAATTTAAAACATTGAAATTCATAGATCTTTCAGTGAATAAAATATCACCTTCGGGAGATTCACCTGAAGGTGGTTTCTGCTCTAACAGGAGAACTTCTGTAGAAGGCCATGGGCCCCAGGTCCTTGAAACACTGCATTATTTCAGATATGATGAGTATGCAAGGAGCTGCCGGTCCAAGAGCAAAGAGCCTCCTTCTTTCTTACCTCTTAATGAAGATTGTTATATGTATGGACAGACCTTGGACCTTAGTAGAAATAATATATTTTTTATCAAGCCTTCTGATTTCCAGCATCTTTCTTTCCTCAAATGCCTAAACTTATCAGGAAATAGCATTAGCCAGACGCTTAATGGAAGTGAATTTCAGCCTTTAGTGGAGTTGAAATATTTGGACTTCTCTAACAATCGGCTTGATTTACTCTACTCAACTGCATTTGAGGAGCTGCACAACCTGGAAGTCCTAGATATAAGCAGTAACAGCCATTATTTTCAATCAGAAGGAATTACTCACATGCTAAATTTTACCAAGAACCTCAAGGTTCTGAGGAAACTGATGATGAACTATAATGACATTGCTACCTCCACCAGCAGGACCATGGAGAGTGAATCTCTTCAAATCCTGGAGTTCAGAGGCAACCATTTGGATATTTTATGGAGAGATGGTGATAACAGATACTTAAAATTCTTTAAGAATCTGCTAAACTTAGAAGAGCTAGACATCTCTGAAAATTCTCTGAGTTTCTTACCTTTGGGAGTTTTTGATAGTATGCCTCCAAATCTAAAGACTCTCTCCTTAGCCAAAAATGGGCTCAAGTCTTTCAGTTGGGAAAGACTACAGAGTCTGAAGAATCTAGAAACTTTGGACCTCAGCTTCAACCAGCTGAAGACTGTCCCTGAGAGATTATCCAACTGTTCCCGCAGCCTCAAGAAACTCATACTTAAGAATAATCAAATCAGGTGCCTGACAAAGTATTTTCTCCAAGGTGCTTTCCAGTTGCGACATCTGGACCTCAGCTCAAATAAAATTCAGGTTATCCAAAAGACGAGTTTTCCAGAAAACGTCCTCAACAATCTGAACATTTTGTTTCTGCATCACAATCGATTTCTGTGCAACTGTGATGCTGTGTGGTTTGTCTGGTGGGTTAACCATACCGAGGTGACTATTCCTTACTTGGCCACAGATGTGACTTGCATGGGACCAGGAGCACACAAGGGCCAGAGTGTAGTCTCTCTGGATCTATATACCTGTGAGTTAGATCTGACTAACTTCATCCTGTTCTCACTTTCCATATCAGCAGTTCTCTCTCTGATGATGATCACAATAGCAAACCATCTCTATTTCTGGGATGTGTGGTATAGTTATCATTTCTGTAAAGCCAAAATAAAAGGGTATCGACGTCTGATATCACCCAATTCTTGCTATGATGCTTTCATTGTATATGACACTAAAGACCCAGCAGTGACAGAGTGGGTTTTGGACGAGCTGGTGGCCAAATTGGAAGACCCGAGAGAGAAGTGTTTTAATTTATGTCTTGAGGAAAGGGACTGGTTACCAGGGCAGCCTGTTCTGGAAAATCTTTCCCAGAGCATACAGCTTAGCAAAAAGACAGTGTTTGTGATGACAGACAAGTACGCAAAGACTGAAAATTTTAAGATAGCATTTTACTTATCCCATCAGAGGCTCATGGATGAAAAAGTGGATGTAATCATCTTGATATTCCTTGAGAAGCCCCTTCAGAAGTCCAAGTTTCTCCAACTCCGGAAGAGGCTCTGTGGCAGTTCTGTCCTTGAGTGGCCAACAAACCCACAGGCTCACCCGTACTTCTGGCAGTGTCTGAAAAATGCCCTGGCCACAGACAATCACGTGACCTACAGTCAGGTGTTCAAAGAGACAGCCTAGCCCTTCTTTGCCGAATGTGACTGCTACCAAGGAGAAGCTTGGCTGCCTTGATAGGCTCACCCATGTGTTGCCAGAAGAGCGTTTTAAGATTCTTCAAGCCCTGGGATTGCCCATATTGGAGAGGAGTCACCAATACATGACAAAGGAAGTGGAAAAATGGGATTTATATAAGCATCAAGTCATCTTTCTCAGCTCTCTGTGTCTCCATTTGCACTTGAGTCTTTGTCTTCTGCCCTTGCATAAAATACTGTTGGGAGAAGGGTGGCAAGTAGAGGATGTGGGACTTTGATTCTCCTGTAATTGTGATTATTTCACATACACACAGTCACCAAGAACTGCACTTCTACCCTTAAGAGGCACTGGTATGTATAGAAATAGGGTTAAAAAAAGGCTCAGAGTCTGCTTATATGGCATTAAAATGTACCAGTTAATTAGTGGTAAAAATAAAGACACAGTTAACTCTTCAGCCAATTGACTCAACCATCTAGTGCCCCGTTCTGTGCAGACCATGTGCTGGCCCCCAGCAGGTGGTTGCAGCTCAAGTGCTCCTTGCTCTTTCTCTCCTGGGCCTGTTATTGGGCTCTTTGGGGAAACAGAAACATCTTTGTCATCGATGGATATAGTCTACTTACAAGTGGGAGAAGAATAAAGCACTCTGTATGCAAAGTCATGCTCTTTACTTTTGATGATAATTTACCTGCTTAAATATGGCTCTGGACTAAATGTTTCTCTCCCCCCAGGTTCATACGTTGAAATCCTAATATCCCAATGTGATGGTGTTGGGAGGTGGGGTTTTTAGGAAGTGGTTAGGTCATGAGACTGGAGCCCTCGTGATGGGATTACTGCCTTAGAGGAAGCAGTCAGGAGACTAACTTGCTGTGTTCCCACTGTGTGAGGGTATGGAGAGAGGCTGCCAGTCTATAACACACAAGAGGACCCTCAGCAGAACCAGATCACGTTGGCATTCTGATTTCCTCCAGACTGGCTTCCATGCTTCAGACTTGTGAGAAATAAATGTTTGTTCTTTAAGCCATGCAGTTTGTGATGTTTTGTTACAGCAGCCGATTTAAGACAGATTTTTTTTATCTGCATGGCAAAGTACTGTTTCCAAGGAAAAGTTGCCTCATCCGAGGATCTTTCAAACTGCTTTATTAACTTATACTGCATACTTGTAATTATCTGAAAACTTGATCCATCAATGTCAGACAGCTTTGATGATAAACTCTAAAGGAGAACCCCAAGAGCATATATTTATTTAGAGTTAGCAAGCAGGGATGACAGTCACATGGATTCCTTTAAATTTGGAGGCTGGGGGAGGAACAGAGGTTTACCACCATTAACACTGAGAAAGCTTGAGTCTTGAACTTTGGCTTCAGTACTCAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAACACCAGAAAGAACCAAGATGTTCTGAAGACACATACTTTCTAAGTGTGTATAAATTTGCATGAGTCCAAAGTCTGAAATGTGACCTGTTTGTTTTTATTTCATGAAAAAAGTTATCTACAGAGGTGTCTGTGCCCTTTAGAAGATAGCTTCAAATCCCAGACTTCAAATTATCTGGGAGATAACTGTGTTTTCTTCATATATGGAAAAGACAAAGGTTTTACTCTGAGGATGGCTATATGTATTATTTCCAAAGGACATGTAATCAATAAGGGTCACAAACTCCCAAATTAATCTCTGGAATCCACAGAGCCAACGATCTGAGCCTCAGTAAGCTAGATTGTACTTCATAGGTGCTTATGTGAAAACAAAGATAACGTCATAAAAATTGGCTGTTGGCATCATAAATTTCTTCTATTAAAGCACATAACTATACAAGGTTTAAGTTATTTTGGTGATTTATAAACCATGAAGCACTTGAAGACAAACATCTTCTGAAATGAATCAAGAGGAAGGGAAACTGACAACAACACAACTCAGAAACCACAGCATATTTCAACACGAGGTTGTGCACAGTGGTTTGTTGTAGGAAATGACCCAAAGCACAGTAACAGATGGTTTTCATTTTAATTCCTTTGTATCTTGACAAGTCACTCTTTTAATCTCCTGAGGGTCCTCTGTGGAGTCCTGTACCATTAGAGCCATTCATAGATGGCTTGGATCGAAAGCCAACAACTCAGGCCACCAGGAAAACATGACTGCTAGGTCCCCTGCCAAGCTCTGAGTGGGGAAG TCONS_00248567 s 5' 0 TCONS_00248567 s 5' 0 EMBV3_02971 CATCGCCTCTACCTCAGGAGTTTACCAACAGGAGTTTATGTCATCCCAGGCAAAAGCAGT Variant GeneID:616832|DCDC1:NM_001076434:62_cdna 133^437 1 EMBV3_06669 GeneID:616832 15 GENE DCDC1 MGC133856 doublecortin domain containing 1 EMBV3_23080 AACAGCAACAGGATGATGGTCCACCCAGGGGCAGCTGATGTCAAGGGAGTCAAAAGACCT Gene GeneID:508333|ZBP1:XM_002692270:1599_cdna Constitutive 0 NULL GeneID:508333 13 GENE ZBP1 NULL Z-DNA binding protein 1 EMBV3_38522 TCCAGGCTCCTCTGTCCAAGAGATTGTCCAGGCAAGAACTCTGTAGTGGGTAGCTATTCC Gene BVT0102_021136 + 0 NULL GK000006.2:46988668-47318339 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208359 1 XLOC_126872 NonCoding TCONS_00208359 XLOC_126872 NonCoding NonCoding - 6:47316074-47316608 - TSS155866 534 0.327715355805243 1 0 0 0 0 0 0 0 0.000152891068512579 0 0 0 0 0 0 0 0 0 0 0 2.68574387976119e-05 0 0 0 0 0 0 0 1.09721944030848e-05 0 0 0 XM_005214792.1 TTI1 PREDICTED: Bos taurus TELO2 interacting protein 1 (TTI1), 1e-47 194 85.29 0.316479400749064 0 noncoding 0 0 0 0 -0.540901493823954 0.11520211254613 -0.00249440719964078 0.964366048322733 GAGTCTGCGACCTCATGGACTGCAGCCCTCCAGGCTCCTCTGTCCAAGAGATTGTCCAGGCAAGAACTCTGTAGTGGGTAGCTATTCCCTTCTCCAGGGGAATTTTCCGACTCAGGGATCCAACGGGGGTCTCCTGCATTGCAGGCTGATTATTTACCGTCTGAGCCAGCAGGGAAGCCTGAAACAGATTAGGGGGAAGAAAATTTTTAAAGGTGTCCTTGAATGGGAGGCGAACTCTATACAAGTGTACAACGTCAGAGCACAGAGAGCAGCACTTTTCCCTAGCTAACAAGCAAGACCAGCGGGTACCTCAGAAAGAAAACAACCAACTGCTAGTAGAGAGTAGCTAAGGGAATCCAAAAGCAAGCAAAGTGGTGGCCAGACTGGGTGACTCAGAGGCATGACTCAAACGCGACACTGGGGGTGTCAGCTCCCGGAGGCCGGGGGCGCGGCGTCAAACACATTTTAGGAAAGTACCAGGCGCGTGGAGGGCGACAGGAAACCTCCCCGGGGAGCGGCCTAGGGCTCCTCCTG TCONS_00203124 . 5' 395 TCONS_00203124 . 5' 395 EMBV3_37649 TGATGCCTTTCCCCTTGTTGGAACCCTTCAACTTCCCCACGATGGAATTCACAGAAAACA Variant GeneID:280750|CLU:NM_173902:34_cdna 767^853 2 EMBV3_00906 GeneID:280750 8 GENE CLU NULL clusterin EMBV3_35086 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42514 AAATCAGAGGTGGGGAAAACATCCACTCTAGAAGCGCTAGTGCCCGAAGATTGTAACCCC Gene GeneID:100336770|LOC100336770:XM_002687296:209_cdna Constitutive 0 NULL GeneID:100336770 5 GENE LOC100336770 NULL TGF-beta induced apoptosis protein 12-like EMBV3_40237 CGTGCGCTCCCTCCTGGGCCGCTCGTTAGAGCTCAGCGGCGGAGAATCGCTGCTGGTGAA Variant GeneID:506040|STRN4:XM_002695181:839_cdna 822^881 1 EMBV3_02282 GeneID:506040 18 GENE STRN4 NULL striatin, calmodulin binding protein 4 EMBV3_34377 CACTCTGCAGTGGATAGCTGCATCTGAACTCGGTATCCCCACCATCTACTTTAAGAAATC Gene GeneID:540759|SPHKAP:XM_002685643:359_cdna Constitutive 0 NULL GeneID:540759 2 GENE SPHKAP NULL SPHK1 interactor, AKAP domain containing EMBV3_25216 GCTGTTGGGCTCTTTCCAAATTTTAACACAAAGAAAAAGGGAAGTTAAAAGGCAGCATTT Variant GeneID:613328|ZNF385B:NM_001083502:41_cdna 434^707 2 EMBV3_35809 GeneID:613328 2 GENE ZNF385B MGC139239 zinc finger protein 385B EMBV3_26753 TCCTCCACTCTGTGAACTGATGGGGCCGCAGGAGGACACAGGGGCCTTCGTTCTGACCCT Gene BVT0102_424314 - 1 EMBV3_39578 GK000003.2:120325133-120330695 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07982 ACAAGCCAAACTCTTCTGCCGGACACTTGAAGACATCCTGGCAAATGCCCCTGAGTCTCA Gene GeneID:533661|TMEM173:NM_001046357:8_cdna UTR3_Alt 2 NULL GeneID:533661 7 GENE TMEM173 MGC137640 transmembrane protein 173 EMBV3_00088 GGCTGGTGCCCAGAAGTCATGAGAAAGAAGAATTTATAGACCTAGGAGGACAGAGGTCCC Gene GeneID:531995|SP7:NM_001102142:39_cdna Constitutive 0 NULL GeneID:531995 5 GENE SP7 MGC152459 Sp7 transcription factor EMBV3_12401 CCTGGCCATGACTGGTGCCATCCGTAAAAGGCAAATACAGCTCAGAGATCAGGCCTACAT Variant GeneID:515889|TM6SF2:XM_002688520:90_cdna 507^589 2 EMBV3_21491 GeneID:515889 7 GENE TM6SF2 NULL transmembrane 6 superfamily member 2 EMBV3_36036 GCACAACTGTGGTTTTAAAGCACTATACGTTTAATCTGTATTCTTTGTACCTCCATTGTC Gene BVV0102_224780 + 1 EMBV3_26116 GK000002.2:34163052-34172503 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108645 1 XLOC_064550 NonCoding TCONS_00108645 XLOC_064550 NonCoding NonCoding - 2:34168905-34169751 - TSS80266 846 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000374632705732662 0 0.00177949506070585 0 0 0 8.77147557928986e-06 0 7.92654927168606e-05 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.158574253620391 0.531815695115687 -0.009301167813038 0.863420656013007 ACTGTGGTTTTAAAGCACTATACGTTTAATCTGTATTCTTTGTACCTCCATTGTCTGTATTTTAATGCTGTTTTTGAGTTGAAAATAATCAAATAATTATAACTGCTAGCATTTAATCTGTATTTTTAAATACTGACAATATATTGTTTGAGTATTTGAGAAAATCCCACGTAATTCCATCATTTTTGTGTTATTCAGGAGTACAATTCAAAGATCTGTAATCTTATAATTAACTGCTTTACATAGTTTCATCAAAATGGCCCTATAATTACAATAGCATTGAAATAATATGGTACTCTCCTAACAAATACTAAGGAAATAGATAAAAATATTGGGGAATCCCTAGTTTTTAATCTGGGAACCTGCCAACTTTAAAGGCAAATTACCTATTTTTAGCTGAAGTTTATGTTCTATAGTTTTGATAGGAATATGTATACAAGAGTGTTTGCTGGTTAAATAATACATTTCAAACAGTAATGTGTGTAATTACTGGAAAATGTCAGTCATCTGATACAAAGAATCTTGCTCACATCAGTTAAGTAGTAAGTACCTTGGAATGCTTTAAACATAACGAAACAATCTACCAAAACACGTATATTTCCTAGTCTTTATGCACATAATGTAGCATGAAATCATGATGCTTTTGAAATACTCTGTGCAGAAATATTTATTTTTTAGCAAATATTTTCTTCAGATTGGTATGTGATATTGACAATGTAATCTACTTGCACAACTAGTTTTGCAATAACCATCCACAAATAACTGTAAATAAGAAAACTGTAAATTTCATGTAAAAATGATTGCAAAATTTTGGTAGCTAAAAGTGTACAAGTTGTATTGAAAATA TCONS_00104981 TCONS_00104982 TCONS_00104983 . 3' 2710 TCONS_00104981 TCONS_00104982 TCONS_00104983 . 3' 3555 EMBV3_05462 TGCCCGAGTGGAAGTGTCTTGGAGTTAGGAACCGAGTCCCCAGCATCTTTGAGTCACTGA Gene BVT0101_074528 - 1 EMBV3_17425 GK000016.2:49285533-49293729 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00126 TCTGCTGTGAAGCAAAACACTCGAATCTTGAAGTGACTGTCCTGGGGAAGGCGGGGTCGA Gene GeneID:616240|BCL7A:XM_002694573:627_cdna Constitutive 0 NULL GeneID:616240 17 GENE BCL7A NULL B-cell CLL/lymphoma 7A EMBV3_08938 AGAGAGTATACCTACCGCGACTACGGCCACTCCAGCGCCCGGGATGAGTGTCCATCGAGA Gene GeneID:617969|RBMX:NM_001046610:8_cdna Constitutive 0 NULL GeneID:617969 15 GENE RBMX HNRNPG-T MGC137496 RNA binding motif protein, X-linked EMBV3_40222 CCACCTGGTTTCAGGGGCTGTTCTGTAACGTGAGATTGCAGGGTGAGCACCTCAGAGGAT Gene GeneID:505681|MRPS2:NM_001098877:23_cdna Constitutive 0 NULL GeneID:505681 11 GENE MRPS2 MGC159424 mitochondrial ribosomal protein S2 EMBV3_26199 GCAGTAGGAGAGGGCGCAGTTCTGTATGAAGACCTATATGATGAATGCGCGATCCAAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39539 GTCAGGGTGGAAACCAGACACTGAAGAGACCAGCAAACAGAAGAAGCTATAACAGAGGGA Gene BVT0102_173581 + 0 NULL GK000003.2:5352701-5454714 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177648 TCONS_00249639 TCONS_00252353 TCONS_00224113 TCONS_00249539 TCONS_00229957 TCONS_00135702 TCONS_00238894 TCONS_00066271 TCONS_00012056 TCONS_00071860 TCONS_00136620 TCONS_00023360 TCONS_00135776 TCONS_00047851 TCONS_00242885 TCONS_00207069 TCONS_00023373 TCONS_00209846 TCONS_00253719 TCONS_00177296 TCONS_00009933 TCONS_00023614 TCONS_00250930 TCONS_00157671 TCONS_00166977 TCONS_00250198 TCONS_00079672 TCONS_00021569 TCONS_00208745 TCONS_00249011 TCONS_00123620 TCONS_00011361 TCONS_00248864 TCONS_00224475 TCONS_00039854 TCONS_00031939 TCONS_00249990 TCONS_00189806 TCONS_00142123 TCONS_00038458 TCONS_00186525 TCONS_00185881 TCONS_00070920 TCONS_00178417 TCONS_00062744 TCONS_00199639 TCONS_00224484 TCONS_00207844 TCONS_00007431 TCONS_00019961 TCONS_00210176 TCONS_00245928 TCONS_00186813 TCONS_00124585 TCONS_00000305 TCONS_00064462 TCONS_00161667 TCONS_00233342 TCONS_00156733 TCONS_00167260 TCONS_00153218 TCONS_00065823 TCONS_00156998 TCONS_00160965 TCONS_00130290 TCONS_00219749 TCONS_00207365 TCONS_00199802 TCONS_00197601 TCONS_00109026 TCONS_00057310 TCONS_00070839 TCONS_00238327 TCONS_00177840 TCONS_00038932 TCONS_00224483 TCONS_00088088 TCONS_00136897 TCONS_00199424 TCONS_00152737 TCONS_00218857 TCONS_00056820 TCONS_00059708 TCONS_00177281 TCONS_00250579 TCONS_00078580 TCONS_00053500 TCONS_00055868 TCONS_00020023 TCONS_00222114 TCONS_00131550 TCONS_00109858 TCONS_00110403 TCONS_00019199 TCONS_00115416 TCONS_00007359 TCONS_00152645 97 XLOC_131641 XLOC_107421 XLOC_152582 XLOC_155294 XLOC_137409 XLOC_152482 XLOC_139451 XLOC_081925 XLOC_145560 XLOC_040985 XLOC_007606 XLOC_043630 XLOC_082831 XLOC_014027 XLOC_081999 XLOC_027983 XLOC_149548 XLOC_125588 XLOC_014040 XLOC_128357 XLOC_156658 XLOC_107070 XLOC_005485 XLOC_014281 XLOC_153873 XLOC_096126 XLOC_101813 XLOC_153141 XLOC_048556 XLOC_012242 XLOC_127257 XLOC_151954 XLOC_075172 XLOC_006912 XLOC_151807 XLOC_137538 XLOC_023671 XLOC_018184 XLOC_152933 XLOC_115843 XLOC_086548 XLOC_022282 XLOC_112577 XLOC_111934 XLOC_042697 XLOC_108190 XLOC_037471 XLOC_121292 XLOC_126359 XLOC_002992 XLOC_010639 XLOC_128686 XLOC_150855 XLOC_112864 XLOC_076129 XLOC_000084 XLOC_039186 XLOC_098554 XLOC_142824 XLOC_095193 XLOC_102096 XLOC_092983 XLOC_040542 XLOC_095458 XLOC_097858 XLOC_079001 XLOC_133068 XLOC_125882 XLOC_121454 XLOC_119262 XLOC_064931 XLOC_035109 XLOC_042616 XLOC_144994 XLOC_107613 XLOC_022752 XLOC_052875 XLOC_083108 XLOC_121077 XLOC_092502 XLOC_132176 XLOC_034623 XLOC_036490 XLOC_107055 XLOC_153522 XLOC_047468 XLOC_031751 XLOC_033676 XLOC_010701 XLOC_135423 XLOC_080255 XLOC_065762 XLOC_066307 XLOC_009879 XLOC_069586 XLOC_002920 XLOC_092410 Coding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_40942 CAGATCACCATAAACGACCTTCCTGTTGGCCGCTCTGTGGATGAGACGCTGAGACTAGTT Gene GeneID:281997|PRDX1:NM_174431:20_cdna Constitutive 0 NULL GeneID:281997 3 GENE PRDX1 PRX1 peroxiredoxin 1 EMBV3_43657 CATGTCTCCAAGTTACACATATTTTATGTGAGGGAAATAACTCAGGAAAGAACTTTTAAG Gene GeneID:537103|ZNF175:XM_002695231:2_cdna Constitutive 3 NULL GeneID:537103 18 GENE ZNF175 NULL zinc finger protein 175 EMBV3_12272 GAAAGGTGGGCTATCATGGCATCTATCTGGGAACTGAAAGATGACTTGAAGGGTGATCTC Variant GeneID:518050|ANXA3:NM_001035325:1_cdna 93^275 1 EMBV3_23617 GeneID:518050 6 GENE ANXA3 MGC129048 annexin A3 EMBV3_36210 ATCGGATTCATCAGGTCTCTTCCAAGGCTCCAACCAGACCGACTTCCAAAGAGCCACCAA Gene GeneID:513841|PAMR1:NM_001015591:39_cdna Constitutive 0 NULL GeneID:513841 15 GENE PAMR1 DKFZP586H2123 peptidase domain containing associated with muscle regeneration 1 EMBV3_16546 ATCGGGGGCCTGGATAAGCAGATTCAGGAGCTAGTGGAGGCCATTGTCCTGCCAATGAAC Variant GeneID:508448|PSMC3:XM_002693575:268_cdna 780^827 1 EMBV3_43449 GeneID:508448 15 GENE PSMC3 NULL proteasome (prosome, macropain) 26S subunit, ATPase, 3 EMBV3_37835 CCATGAAGACAGTGACGAGGAGCCCCAGTTCCCTCCTCCCTCAGTTATAAAGATTCCCAT Gene GeneID:100297538|SLC4A4:XM_002691193:116_cdna Constitutive 0 NULL GeneID:100297538 11 GENE SLC4A4 SLC4A5 solute carrier family 4, sodium bicarbonate cotransporter, member 4 EMBV3_17918 GAGGCTTCAGAACCACTGAACTTGAAACTTACCCCATAGGGATGCAGGTGGGATGCTGGA Gene GeneID:539845|THAP11:NM_001104994:384_cdna Constitutive 0 NULL GeneID:539845 18 GENE THAP11 MGC152621 THAP domain containing 11 EMBV3_34122 CCATTTGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCAC Gene GeneID:100337452|LOC100337452:XM_002692217:1437_cdna Constitutive 0 NULL GeneID:100337452 13 GENE LOC100337452 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_23458 CTCTGGCCACGGTGCTGTGTGAGGCAGGAGGGTGTGAAGGTCAAAGGCCTCATCCTCATC Variant GeneID:505649|ACCS:NM_001015526:39_cdna 645^820 1 EMBV3_26985 GeneID:505649 15 GENE ACCS ACS 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) EMBV3_07961 CACCCACTACTGTAGGGTTTTTTTTTTACCATTGTTGGACCTGGTAAAGGGGGAACCGAA Gene GeneID:511826|HUWE1:NM_001110004:26_cdna Constitutive 0 NULL GeneID:511826 X GENE HUWE1 NULL HECT, UBA and WWE domain containing 1 EMBV3_06693 TGAGCTCTAGAACCAGCATTTCAGCCATGAAGGTGGCAAGCATCTTTCTCCTCACTGCCT Gene GeneID:574092|SPINK1:NM_001025348:76_cdna Constitutive 0 NULL GeneID:574092 7 GENE SPINK1 NULL serine peptidase inhibitor, Kazal type 1 EMBV3_01100 CTCTCTACCCGTTGTAAAACATTCATGTTTATTGCCAAAGGGCTTTTTCCAGGCTTTGGC Gene GeneID:781109|MGC139000:NM_001102323:55_cdna Constitutive 0 NULL GeneID:781109 5 GENE MGC139000 NULL hypothetical protein LOC781109 EMBV3_43695 CTTCTGTGCCCATTCTTCAGGCAACTCTGACCCCTTACCGTAGCTAATTCTAGATGCCCT Gene GeneID:616550|PITPNA:NM_001046582:163_cdna Constitutive 0 NULL GeneID:616550 19 GENE PITPNA MGC137921 phosphatidylinositol transfer protein, alpha EMBV3_27911 CCCACATCTCCTTTGCTTTCAGTCTTTACCAGCATCAGAGTCTTTTCCAATGTGCAGGCC Gene BVV0102_221669 + 0 NULL GK000011.2:67289446-67334563 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00145 GCTGCTTCATGGGCGTGTGTTGCTTTTTGCTCTGGGAATTACCCGCTTCCATATCTCCAG Gene GeneID:617724|C14H8orf46:NM_001076475:34_cdna UTR3_Alt 2 NULL GeneID:617724 14 GENE C14H8orf46 C8orf46 MGC139854 chromosome 8 open reading frame 46 ortholog EMBV3_14360 AACAACCCTGTCCTAGCCTCTTCTCAGATATGAGTTAAATACACACGGTGTATATATTTT Gene GeneID:100336733|LOC100336733:XM_002690410:83_cdna Constitutive 0 NULL GeneID:100336733 10 GENE LOC100336733 NULL hypothetical protein LOC100336733 EMBV3_39673 TATCGCAGGCCCAAGAAGACTGGTCAATAACATACAGAAGCTCATCGGTTCCACACCACG Gene GeneID:337908|PAG14:XM_002699247:249_cdna Constitutive 0 NULL GeneID:337908 29 GENE PAG14 NULL pregnancy-associated glycoprotein 14 EMBV3_05629 ACCCACGTGCCCACTCTGCAGGAAGACCTTCTCTTGCACGTACACGCTGAAGAGGCACGA Gene GeneID:789062|LOC789062:XM_002707775:509_cdna Constitutive 0 NULL GeneID:789062 21 GENE LOC789062 NULL similar to hCG1802417 EMBV3_10759 CAGAGACCTCACGGCATTGTAGCGCAGGGTGGTAGGCCAAGGTTAGGACACTGTGTAAAA Gene GeneID:535775|BRPF1:XM_002696883:328_cdna Constitutive 0 NULL GeneID:535775 22 GENE BRPF1 NULL bromodomain and PHD finger containing, 1 EMBV3_23187 GGAGACACAGTGAACTTGAATGAGGAACCAGTACTTGTGATAGCCTGCGTCTTAAAGAGG Gene GeneID:100337080|LOC100337080:XM_002688034:5_cdna Constitutive 0 NULL GeneID:100337080 6 GENE LOC100337080 NULL T-cell activation Rho GTPase-activating protein-like EMBV3_40989 AGGAGGGAGCCAGCCACATGCTGAGGTGCAATTTTTCTGCCTCCGTGAGCAATGTACAGT Gene GeneID:100335575|LOC100335575:XM_002690582:13_cdna Constitutive 0 NULL GeneID:100335575 10 GENE LOC100335575 NULL hypothetical protein LOC100335575 EMBV3_21062 CAGTCGAGGAAGATACCACATGCCTCGGAGCAACTAAGCCCTTGAGTCACAACTATCAAG Gene BVV0101_048105 + 0 NULL GK000023.2:27243368-27274033 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17575 AGCATATTGGGCCTGAATTTGTTATGGTTCTTTAGGTGCAAGTAAAAGCCAATCCTCGAA Gene GeneID:536852|LYG2:NM_001099076:80_cdna Constitutive 2 NULL GeneID:536852 11 GENE LYG2 MGC151738 lysozyme G-like 2 EMBV3_13939 TCTCAGGAAGCCCAAAGCCTACCCTTACTCACTTTTCTTAAATCCATCCCCACCCCTACC Gene GeneID:514346|SDS:NM_001075662:153_cdna Constitutive 0 NULL GeneID:514346 17 GENE SDS MGC139659 serine dehydratase EMBV3_30498 TCTGCTGAAGCTAGATGTGGTCCCGAAACGGTCAGCGGGAGTGTAGGGTTAGGTGTCTAT Gene BVT0102_423294 + 1 EMBV3_13088 GK000002.2:135422029-135557007 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112957 1 XLOC_068852 NonCoding TCONS_00112957 XLOC_068852 NonCoding NonCoding - 2:135453045-135453827 - TSS84578 782 1 TCONS_00112957_1 67 0.471867007672634 1 0 0.00102651769493961 6.42483288365635e-05 0.000958533386645346 0.000138048508770639 0.000404065516679806 9.1484563982469e-06 0.000246094589497967 0.000105890074747434 0.000655829944114017 0.000168368345812878 0 0 0.000286194583390091 5.41380593323355e-05 1.88217645452665e-05 0 0 0 0.000155889722139207 5.51771269372676e-05 0 0 0 0 0.000132899227924724 0.00012613372665385 0.000104895276332186 0 0 0 0 noncoding 0 0 0 0 -0.0649250614063863 0.573697446218086 -0.0138245327941441 0.78970610899137 TTTTGGTAGAAGATAAAGGCTCAGGGAAGCCCAGGTTTGCATGGGATAAAGACTTCCTTTCCCAGCCTCTGCTGAAGCTAGATGTGGTCCCGAAACGGTCAGCGGGAGTGTAGGGTTAGGTGTCTATCCGCAACGTCGAGGGAGGGCCCCTAATGGGGGAAGTGTGCCTTCCTCTGTCCTTGCTCCCATCTGCCAGCTGGAGTCCCACGTCTTGGAACACGAGTATCTTGGAGAAGGAAATGACTACACTGCAGAAACAGAGGGAGACAGAGCTCGACACAGCGGGGCGCCACGCCAGCACAGACCCACCTCTAAACTACTTGAACTTAAGGGTGAATCAACTTCTGTGTTGCTGAAGCCTCTTATTGGGGGTTTTTCTGCATTAATCGTAAATGGATACAAGGACCCATGTATGAGGTCATCTTCTGCAGACCTTATCAACAGTCGGCCTACTGCTGCAGCCTTTAAAGGGTTAAAGGGAACTTCTGGTGTCACTGATCACCCTCTCCAACAAGAGCAGTTCTGCTTTTAAAGACACTTTCTCTGAGGGGGAAGAACTGGAATCTTTACATTACCCCCAACTTCCCCTCCAATGACAACCAGAGCTTCACAGAGGAATTTAGAAAATGTTACATTACTTCATATGGTAGGAAATAAGACATAATGGGGAAAAAAATTCACTGTAAAGAAAAAAGTAGAAAAAAATAAAACGCGATCAGGAAGGCCTATACACACTCGCAGCACTCCGAGCTTCCCAGCAGACAGAGCAAAAAGGGAAACAC TCONS_00107001 . 5' 17914 TCONS_00107001 . 5' 17914 EMBV3_35147 GGGGCCCACTTCGTGCCATCGCTCAACATGAACACTTGATGCCGTTTCTTTCGATATTTA Gene GeneID:281138|EEF2:NM_001075121:164_cdna Constitutive 1 NULL GeneID:281138 7 GENE EEF2 EF-2 eukaryotic translation elongation factor 2 EMBV3_37729 TCTCTCCAGCAAGTGACCGGGCATGACCACTATAATACCAATCTGAAAGCAATCCAGGGG Gene GeneID:616773|LOC616773:XM_002695926:306_cdna Constitutive 0 NULL GeneID:616773 19 GENE LOC616773 NULL hypothetical LOC616773 EMBV3_24741 TGCAAGTGGCAGAAAGCAAGGTTATGTGCATGGCTATGTGTTTTGTAGGTGCATGTGTTG Gene GeneID:100140348|LOC100140348:XM_002690052:25_cdna Constitutive 0 NULL GeneID:100140348 9 GENE LOC100140348 NULL hypothetical protein LOC100140348 EMBV3_20239 CCTGGGCTTCAGTCAGGAACACATGGGTACATCAGCCCTTCAGGTTTCCCAAATGATTGT Gene BVV0102_261965 - 1 EMBV3_26943 GK000002.2:36319503-36373938 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102200 TCONS_00102204 TCONS_00102202 TCONS_00102201 TCONS_00102205 TCONS_00102203 1 XLOC_061827 Coding TCONS_00102205 XLOC_061827 Coding Coding ITGB6 2:36340824-36350758 j TSS76175 2558 1 TCONS_00102205_2 107 0.0535574667709148 3 0.74277660324172 1.11175334282928e-09 0.000121027587211085 2.78269308455893e-15 0.000128641607528866 8.95568176847915e-05 1.31973966315166e-05 0.000211199912652966 0.000311328298430304 0.000576270558691373 0 4.92200708263275e-05 8.75826940558449e-11 4.31695240124599e-11 2.84753394542035e-10 0.0001244294521757 1.06978489454784e-16 1.00256090320445e-09 0 1.87353103626463e-10 1.31832283297795e-10 1.60693914175681e-05 1.51599597055484e-10 9.10249978655992e-24 3.01871144486431e-11 2.22468445170025e-05 9.46136693492678e-05 3.1413323999339e-05 1.12648029476753e-05 0 0 XM_005202407.1 ITGB6 PREDICTED: Bos taurus integrin, beta 6 (ITGB6), transcript variant 0.0 4194 100.00 0.90852228303362 XM_005246537.1 ITGB6 PREDICTED: Homo sapiens integrin, beta 6 (ITGB6), transcript 0.0 1977 79.38 0.90852228303362 TCONS_00102205_2 sp|Q8SQB8|ITB6_BOVIN ITB6_BOVIN Integrin beta-6; 1e-56 189 92.00 0.906542056074766 1 noncoding 1 1 1 1 0.10092907241254 0.486228589158456 0.00840073915915905 0.867322765214747 CCACACCTTGGTTTTACAGACGAGGGCACTGGGGCTCAGAGAGATAGAGAGACTTAATGGATTTCAGACAGCTACTGTCCATCAGATAGGAATGGAACCCACCTCTCCTGAACCCAATTCAGGAATTTTCCAAGACACCAGGGCACTGCATTAGAGTGAAAATAAAACTGAAAATCATGATTATTTTCTGTCTATATATTTTAAAAGGAAGAACAAGTAGTATACTTCAAGTGGACTGTCCAAAACCTCCAAATATTCCCATGATCATGTTGGGGGTTTCGCTGGCTATTCTTCTTATTGGAGTCGTCCTGCTGTGCATTTGGAAGCTCCTGGTGTCTTTTCATGATAGGAAAGAAGTTGCCAAGTTTGAAGCAGAAAGGTCAAAGGCCAAGTGGCAAACGGGAACCAATCCACTGTACAGAGGCTCCACCAGTACCTTTAAAAATGTAACCTATAAACACAAGGAAAAACAAAAGGTTGATCTTTCCACGGATGGATAGAACTACTTTATGCACAGACAAATTTTGTTTCACTGATATGAAATGTTATTGCACTATTTAATTTTTCTCTCTTTGTTGTTTTAAGTTTGGTTTAAGATAATAATAGGTCATTTGGAGATCAGTCATTTTCTGTGTGAAGGTTAGAGACAATGTTGACAGTTTCGAAATAATCAAGAAGAGAGATATCCTTAGCAAAGAGGTGACTTTGGGGATCATTTCAAAAATACTAACTCTGTTACATTAATGCCTCAAAAAATCATCAAAATGATTCATGAAGGCCTGATTTGCATTTGAAAAATGTTTGAAATTAGAATCTCATTTGTTACAGAAATACAGCTACCTGAAGTCTGTCTCAGCAAAGTCACAAAGTCCATATGCCACATTATATAGTCAAATTTGCCAACGAATTCTAAACTTTTAGTAAATCTGCCCTTTCCTAAAGGAAGGTTTTTTTCTTAACCAATGAAAAAAATGAGATACTGACTTTTACTTAAGCTATAGGATGTAATTCTCCTAAAGATGCTCCTCATGTAAGAATGTAAATGAAGTATTAATAATTTCTACAGATTTGAATGTCCCTAAAAGTCAATTTTTTTTTGTTTTACAGATGAAGAAAAAGTAATTTATAGATTAGGAAGTCACCAGTAAAACACAAAAATAACAGGCCTATCATTAGGTTATGTTTAATGACCTGAAAAATAAACTTCTACATTCAGTTTCCCGATTGACCCTGCGTTTTCAGACTATTACTCCTTCTGTATTTCTCAACCCATTTAACTCAGTTTCACAGTCATGTAAACCCTGTAAATTTCATATGAAAGTTTTAATTTCTTGTCAAAAATTTTAAATAGTGAGATAGCTTATTCAAATTGAGCTCCAATAACACAAAAGGACCATGCATTAAACAGAATAAAATTTTTAATGGTTTTAAACCAAACGCATCATGAATACACAAGTCTCCTGTGAGTAATAGGCTTACTTAAATCTGTATTCTTTTTCCATTTGCATAACCCGGCTTGCATATTTCAGTTGCATATGGTGAATATGCTACTTGAAAAAGTTGGATTTTACTTGCAAAATACATGTGGGTAATTAGGGATCCACAGGTTAATTGAAGAGATGAACTCCGTAGAATATTATTCCTTATAGTTAATATTGCTTCACACAGCACTTTCATCTCATTGATCCTCGGGAGGAAACTAAGCCTCAGAGAGTGGGTGGAACTGGTCTGGAATTGAGATCTTCTAGCTCCAAGCTGCTGCTTCTTTCCGCAGTGTGAGACTGACTCTTATCAGTGAAATGATAGAAAGATTTTGTTAGTTAAGTGATAATTGCCATTTGTTTGAAAATGTAGTGGCTAGACAAATAGCACTTAAACTACTGGAATATAGATGAGGTCTTGTACTTTTGTGCAATGTTTATTACCTTTGAGAAAATTGTAATGTGAAGCCTTTTACTAGGTGGGTAGTTCATTAGGTAATGGAGGCTTCGTGTTTATCCACTGAACTGGCACAGAATAACCCATGATAAGTCTCTTCAATTCTGTCAGAGAGTTTGGTACACAATTTGATCACTTAGAGACTTATTTTTTTCAGGTTTCTAAATAACTCAGGTAAATTAGACACTTGGGGAGTATGCAGTTATACTAAAAGAATTACTAAACAATCATTTGGGAAACCTGAAGGGCTGATGTACCCATGTGTTCCTGACTGAAGCCCAGGGTTGGTGGGAAATCTCAAGCAATAAGGAAGTTGCAATTCCAATGACACAATGGCGGTATTCATCTCTACGTGTGATATTTTTGTATTACTACTAGAATGGGATTTTAGGATATATAAATTTCCTTTGTGTGTATATTGGGGAAGGTAGAAAAAAATCTGCTATTTCTCTGCATCCTGTTTTGATCCAAGGCTGGACCTTGAAAAGGTCAAAACATTAACAGTAGTACTTCTGTTCACTGAAGAGTTATGTTACATGAAGATACAGTGGTTGTTTTTTGTAAGTTGCTTTATTGTATTTTGCATTGACATAAATAAACATCATAATTTAAACAATGAA EMBV3_05454 CCAGGTAGTCGGTCGGCTGTGGACTCTGTGACCTTTGTCTCAACCTGTGTTGTAAGATCT Gene GeneID:507996|BRPF3:XM_002697205:91_cdna UTR3_Alt 2 NULL GeneID:507996 23 GENE BRPF3 NULL bromodomain and PHD finger containing, 3 EMBV3_31095 CTACACATTTTTAGACCCCTGCGAAGCTCCAGGAACATGGATATGAAGGCTGGACCGTCT Gene GeneID:533883|LOC533883:XM_002694615:158_cdna Constitutive 0 NULL GeneID:533883 17 GENE LOC533883 NULL similar to Uncharacterized protein KIAA1671 EMBV3_36514 AGAATCTTCTGGCCATGGGAACCCCAAATCAATACCTCCTCACCAGGGCCTTAGAAGCAC Gene GeneID:538095|LOC538095:XM_002690774:553_cdna Constitutive 0 NULL GeneID:538095 10 GENE LOC538095 NULL similar to nuclear protein in testis EMBV3_02947 TTAGTCTCTGGCTTAGCCCTGCATGATTGCTCCTGTGCCTGAGTTATGGTCTTCCTGTGT Gene BVT0102_133685 - 1 EMBV3_09754 GK000002.2:98269170-98416819 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103194 1 XLOC_062032 NonCoding TCONS_00103194 XLOC_062032 NonCoding NonCoding C2H2orf67 2:98280077-98282188 x TSS76669 2111 3 TCONS_00103194_6 83 0.0459497868308858 1 0 1.10224160430533e-05 3.33202243445328e-05 2.19186071484448e-05 3.93374814239293e-06 0 0 1.10501320503157e-05 2.80184961480648e-06 0.000134554693540847 6.63009014205344e-06 1.41566153533368e-05 1.35506847479321e-05 1.89622345583136e-05 4.77098461200339e-05 0.000256814152108168 0.000898289785824382 0.0028076815575772 0.000326286321317151 0 0 1.15043971352355e-05 0.00084093330140058 0.00188349756066587 0.001552277429132 1.64104160039196e-05 3.32149981952767e-05 6.93882983810523e-05 0.000273003185650975 0.000197771565681466 0.00201927561954692 XM_005197522.1 KANSL1L PREDICTED: Bos taurus KAT8 regulatory NSL complex subunit 1-like (KANSL1L), transcript variant X1, mRNA. 6e-20 104 98.33 0.0279488394126007 NM_152519.2 KANSL1L Homo sapiens KAT8 regulatory NSL complex subunit 1-like (KANSL1L), 4e-16 91.5 93.33 0.0279488394126007 0 noncoding ATATCCTTCATGCTTTATTCATTCAAACCTTTGTATTGATTGCTTCCTATGGAGTATACTGTTGATGGAACATAGTAATATCAAGGAAAGTAAAACTGAGATATGGGAATTAGTTTAATAGATTTCTAAAGCTTTGGTTGTGGTGTTTCTGGCTAGAATCATTCTGAACTAGGGTGCATTAAAAGAGGGAAAGGCATTAAAAAGCAAATTTTGGTAGCTGAAAAATGATATCAGTTGGCATAGAATGTAATAGAAACAATGTCTTTTACATAATACTGCCTCTTCAGACTGTCACTTTGGAATTAGTTTGGCTATATAGTATTTTTCTCTATAATTTTTCTTGTCTTAATGTAAATTTTATCCTTACAGGTCCATAGTCCCTTTCCTGTGGTTCCAAAAATCTGGAAAAAAAAAAAAAGTTTTCATAATTCATTTGGTGACACAGCCTGATCTGAAAATGATGTGAGGTTATTGTATTTCCTATGAGTATTTCACTGTAAAACTCAGTATTGATTGAGAACTGCCCTAGACTCCCATACAAGACTAAATTTCATGCAGAAAAATATGACTAATAGTGGAAGTGAATACAGATACTCATGTAAGTTCAGTATTTCAACAACTCATGTATGGAAATGGTATGTTTTATTTTTGCTTTTGTTTATTTTTTATGCATGTTGTCTTTGTAGGCAAATTTGTACAAAACACTTTCCTAATCAAATTAATACCTTTAGTGAGGAACTTTTCATAAGTTTTGAAAATAAAAAATCAAAGAGGGCTTATAGTTCCATTTAGTTCCTCAAATATCAAATTAAGCACATGGAAAAGAAATTAAGCAGTCTTCATAATAAGTGCGATTATCCCATGAGTGAAAGGCAACTTACCTCTTCTTCACCTAAATCATATTCATCCAAAGGCTGAAGAACAACCATCCTCCAGCTGTTGAAGATAGAACCAATTTCAAATAGCTTTTCTTAATCTATCTAAATGTAGCAATTTTATTCTATAAGCACAACCAATATAGTAGTGTTTTCTTTCTTTGGGATTTCCATAATTCAACTGGTTGTAGTATTTTAGTACTTCATTTTTTAAAAGAGACAAAATACTTGTACCATGAGAAGGGGACAAGGAGAAGACGAGGCTTTGCTTTGGGCCTTACAATAAACAGTCTCTTCTACATAGTTGCATTTTATACCTAAGAATGTACTAATTTTGAAATGAGTTAGTGGTATGCTGATAAACTGGCACAGAAAATAAAAAGGAAAAAAGCTGTGATTTGTAGCATTTGCCAGTTTGTTTGTGTGAAGACTCCCATCATGGCCTCACATCACAGGACTTGTATATTAAAAACCAGGTCAACCAGCGAGCTCCAGCCTACCACTGGAAACTGGAAAGACTGTTGCTATAGAACTTGTAACCACCAAGTGTTGTTTTTACTTAATATACAATGTATCAACAGATTCTCTGTAGGAATTCGTCTAATACTTGCTAGAGTATTAGGAGTTCTCTCACTGCCTCAAATCAATTATGAATAAAAGGATCAATTTAGCTAGAATAGAGATGGGTAGGAATAACTGCAGTTGTCATCAGCTGTCTTGTTTCTATCCTTTTCTATATCTACTTCTTGGTGCCAGATTTATAATCTTGAAAGTGCTTTCATTATCACTAAAAAATTTGACTAAGTTGGCTGCCAGGAGACAGATCTGTGTATGGTATTCGAGGACATCCACAACCTGGTTCCAGTTTATTTTTGAGCCTTCATTTCGTTTATCACTCTAAACAAAACCTTAGTCTCTGGCTTAGCCTTGCATGATTGCTCCTGTGCCTGAGTTATGGTCTTCCTGTGTGAACACACACTTTCTCCTTCTGCCCCACCCCCTTTTCCTAATATACTCCTAGGTCTTCCCACTCTTCTTGATATTTGACGTGTGTATTGCGGACCTGGAGATACATGAGAATCTTTTGTTGTCACAGGAGTGGTAGTTGCTTTCTTTGAACTCTGTGCAAATCTCCATTTTAAAGAGCAAAGATTGTTAATGGAATTATTTACATCCCTAAAGTACCTTTTAGTTCCATGTACACCATAGAAGACTAAATGTTGAATGAAAAAATAC TCONS_00106000 r 5' 0 TCONS_00106000 r 5' 0 EMBV3_36657 TCATGACGACCAAACACCTCCAGACAGTGCCAAATGTGTCCCGAGAGGCAAACTGACCTT Gene BVV0102_267772 + 1 EMBV3_00292 GK000026.2:22960684-22961815 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151906 TCONS_00151907 1 XLOC_092215 Coding TCONS_00151906 XLOC_092215 Coding Coding ACTR1A 26:22960812-22978156 j TSS113434 3849 1 TCONS_00151906_3 329 0.0911925175370226 10 0.778642680043822 1.34734694896325e-05 4.99714603763446e-05 3.58184750482624e-05 4.7338315383112e-09 1.43564443725085e-05 7.81210595670822e-10 4.15293328719715e-05 3.98958932245751e-12 7.62509719017998e-07 4.2803586069652e-06 2.26283688290009e-33 6.27612545350919e-24 8.82452904430087e-10 4.96931553659638e-11 1.74602110905022e-22 0.000192263001376102 1.02242133307077e-41 4.22094863979146e-05 2.26052312626285e-05 1.44814847192696e-05 2.14395550026928e-37 5.27280856650131e-05 9.41123076867253e-06 7.33631942754045e-06 9.00287083447648e-08 0.000667152502441584 7.50979770075756e-06 1.9895959884213e-05 7.38215786675681e-48 1.07987736080902e-68 NM_001193248.1 ACTR1A Bos taurus ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) (ACTR1A), mRNA. 0.0 4892 99.93 0.706157443491816 NM_005736.3 ACTR1A Homo sapiens ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) (ACTR1A), mRNA. 0.0 2711 82.34 0.706157443491816 TCONS_00151906_3 sp|P61163|ACTZ_HUMAN ACTZ_HUMAN Alpha-centractin; 0.0 676 100.00 0.996960486322188 1 coding 0 0 0 0 -0.206807096202638 0.13937221009932 0.0198660801771908 0.79617460419773 AGACTGCGCATGCGTGTCAGTGGCGTTAGCAGCGGACCGGGCTGGCAGTTCCTTCCTCGGAAGGAGAGGTTCTTCTGCCATGGAGTCCTACGATGTAATCGCCAACCAGCCTGTCGTGATCGACAACTGTGGGCAGACCCAAGCACGTTCGTGTCATGGCAGGCGCCCTCGAAGGTGACATCTTCATTGGCCCCAAAGCCGAGGAGCACCGAGGGCTGCTCTCCATCCGCTACCCCATGGAGCACGGCATCGTCAAGGACTGGAATGACATGGAGCGCATCTGGCAGTACGTCTACTCTAAGGACCAGCTGCAGACTTTCTCAGAGGAGCATCCTGTGCTCCTGACAGAGGCGCCTTTAAATCCACGGAAAAACCGGGAACGAGCTGCTGAAGTTTTCTTCGAGACCTTCAACGTGCCAGCCCTTTTCATCTCCATGCAAGCTGTGCTCAGTCTTTATGCCACCGGCAGGACCACGGGTGTGGTGCTGGATTCTGGGGATGGCGTCACCCATGCCGTGCCCATTTACGAGGGCTTTGCCATGCCCCACTCCATCATGCGCATCGACATCGCTGGCCGAGACGTCTCTCGCTTTCTTCGCCTCTACCTGCGCAAGGAGGGCTATGATTTCCACTCATCCTCCGAGTTTGAGATTGTCAAGGCCATAAAAGAAAGAGCCTGCTACCTGTCCATAAACCCCCAGAAGGATGAGACACTAGAGACGGAGAAGGCGCAATACTACCTGCCCGACGGCAGCACCATTGAGATTGGTCCTTCCCGATTCCGAGCACCTGAGCTGCTGTTCAGGCCGGACCTGATCGGCGAGGAGAGCGAGGGCATCCACGAGGTGCTGGTGTTTGCCATCCAGAAGTCTGACATGGACCTGCGGCGCACGCTGTTCTCCAACATCGTCCTCTCGGGTGGCTCCACCCTCTTCAAAGGTTTTGGTGACAGGCTATTGAGTGAAGTGAAGAAATTGGCTCCGAAAGACGTGAAGATCAGGATATCTGCACCGCAGGAGAGACTGTATTCCACATGGATTGGGGGCTCCATCCTCGCCTCCCTGGACACCTTTAAGAAGATGTGGGTCTCTAAGAAGGAATATGAGGAAGATGGTGCCCGGTCCATCCACAGGAAAACCTTCTAATATTGGGACATCGTCTTCACCTCTCTCTGAAGTTAACTCCACTTTAAAACTCGCTTTCTTGAGTCGGAGTGTTTGCGAGGAACTGCCTGTGTGTATGAATGTGTGTGTGTGGGTATGAATGTGTGCACATATGCGAGTGCCGTGTGGCCCAGGGATCCCAGGATTTCAGGGTCCGGAAAGGACGATGAACTACCCATAATGGCGACGGCCTGAGACCTGGGGTTGACCACTAACTGGCCCCTGACAGGGAAGAGTGCTGGCAGAGGGCCCTGCTCTGTCAGCCGGGCCTTTGTCTGGCTGTGTGGGACTATGTTTACTACCACAGGGAGACAGAGAGGGAGGTAAACCAACCCCGGGGACACTTGCTGCTGCCCATCCTAGGCTGGGCTGGCCCCACCCCCGAAGGAGGCCCTGTGGCCTCCCCTTGTTCATCATTCTGCTCTCGATGCCTCTTGATCGTGGACTGAGGCTTGAGTCCAGGGTTGAGTTCTTGTCTGGTCTTGTTGCAGTTTGGGTTTAGAAAGCTGGAGAAACACTCCAGGAGCTGTTATTGAGACTTCCCTGTCAGGAGCGGGCAGGATGCCCTCAACTTCACCTGGGGACCAGGACCACACTGGGCATTTGAGGAGGGCATGGAGTGCTACTTCTGATCAGTGGCAGGCTTACCGCTCCAACCCCCAGCGCCATCCAGGGATCTCTGGAGAGTTTCAGGAGCCTGTTGGCCTCAGGTCCTGTTAACTTGCTTTCCATCCATCCATGGGCAGTGCCATCTTCAGTTTTATTTATTGAAGTGTTTGTTCAGTTAGGGGACTGGAGAGAGGGAGCTCACTGCCCCATCCACCAGTCACCCTGTTCACACTAATGTTTACAGCGCCTAAGCTTAGCATAGCGTTCAGGGCCCTGCCACTCCCTGCCAACATGAACTGACAGTATCCATAGGCCTCAGGACCATTTGGGATCAGAGGCTACATTCAAAGTCACTCTGGCCTCTTTCTTTCTCCCTCTTCCACTTGCTCACTGCCCTGGAATCAACAGGCTGGTTGCTGGTTGGATTTTTCTGAAATAGGAGGTAGAATCACCATTTGGCAAAGGCTCCCGGCAAAGGAGGGGTGTTGGGGATGCCGCCTCCTTAGGACTGGAGAAAGAGCCACAGTTAACCAAGCTGCCTTTTCCCATGCTAGCTGACCCCAGGGGACTAGCTTGTAGAGGCCAGACAGCCCCCTCTGGCTGACTTGTGCTATTCTTGTCTTTGGACTTGTTTGGTCAGGGAAGGAGGGGCCAGACCAGGCTGCCTGGAACTGATGGGCTCAGGCTCACTTCCTCTGGTCCAGTGGGGCCAGGCGCCTACCCTGGACTGGGCTGGCCTGGCAGGGGTCCAAAGGCTCTTCAGCCCAGAAGTGCAAAGCTGGGGCTAGCAGATATTCACCGGCACCCTCACCCATGACACCAACACTTGCCCGATCCCAGATTCCAGGCAGTATTCTCGACCCCATGCCGTCCAACGACCAAAGGCCCTGCCAGGTGTGGGCCGCAGCAGCAGGTGTGTGTGAAAGCGATGTGGCGACCCGCGGACTGCAGTGTGCTTAACCAGCTCACCTCCCTCCTCTTAGCCCAAGCCTGTCCCCTGCACAGCCTCGCACAAACCATGTTGCCTGGTGGGGCCCAGTGTACTTAAATAAACTCGTTCTAATAGACACATCAGCTGGGCCTCTGTCTGCAGTCAGTGCAGGGTGGGAGGGACGAGCTGTGGGCCCTGAGACTGGGCCTAGTCTGTCCTCTAGAGGGCATGTTGCGCCCGCCAGACTTGGCCAGACCTTCACCCAAGTCCCAGCCTGTCAGGTGTATGCAAAGAGGCTGTTGACAAAGAAGCCCAGAGACCAGGCCAGGAACTTAGAGTCCATGCCCTGTGCCCAAGCCCATGGATGAGATTCCACCCACAATGAGAGGTCAGCTCTTCATATCTCTGAAGTCAGGAGCTTATTAAAACACAGTTCCTGGGGTCTATGCTCAGATATTCTGATTAATCACTTCTCCATTTTAAACCTGTATACTTGAACAGTTAGGGGTGGGAATTGCTAGGCACTTTACAAGTGTTAACCATTTGATTCTCGCAACAACTAAAATGCAAGTATGTTTGTTACTCACTTTACAGATGACGAAATAGAGCCACAGAGAGATTATGTAATTTCTCCCAAATCTGCCCTTTGTTAGCTAGAATTTGAACCCAGGCAATATAGCACTAGACTACATTCTTAACTGTGATGCAGACCTTCAGATAACCATTGGTCTAGGGCAGTGGTTCCCAATTAAGGTCAGTTTGCCTCTCGGGACACATTTGGCACTGTCTGGAGGTGTTTGGTCGTCATGACTGGGGAGAGATGCAACTGACATCTAGTAGGCAGAGGCCATCCACAATAAAGAACTCCCCAGCCCCAAATGTCTATAGAGCCCAGACAGAAACGCCGGCCTAAAGCCGAGGTTTCTAGTCCCAGTCTCACGGTAAATAAAAAAAAATTTTTAAGTCATCTTTGGAAGATCCCTGTGACTCCAAGGATCTCTAGCCTAGAAGTGGCCACTCCTTGCCCACCACCTCCAGCAGTGGTACATGGGAAACGCAATGGGGCTATGACCACAGGCCTGAAAGCTGTTTGGCTCCCAGGGGCCCATGAGGCTACGGTCTGCAGGCTCTCCCCCCTACCTCAGT EMBV3_22650 TTTCCCCTTACTTTTAGTCTTCCCCAAGGGCAGGAGGGTGGATGAATCGATAGTCACACC Gene GeneID:521470|TRAPPC6B:NM_001038134:23_cdna UTR3_Alt 4 NULL GeneID:521470 21 GENE TRAPPC6B MGC133693 trafficking protein particle complex 6B EMBV3_27519 TCTGAAGATCACCTAAATATCACTTGCTCTGCCAATGCTCGCCCAGCCCCTATGATCTCC Gene GeneID:534910|CD200:NM_001034620:98_cdna Constitutive 2 NULL GeneID:534910 1 GENE CD200 MGC128080 CD200 molecule EMBV3_23375 GGCTGAAGGCATCAAAGTGACAGATGCTCCAATCCATATCACAAGAGACGAACTGGTTGC Gene GeneID:513265|CDKN2AIP:NM_001046143:46_cdna UTR3_Alt 1 NULL GeneID:513265 27 GENE CDKN2AIP CARF MGC137334 CDKN2A interacting protein EMBV3_17666 CAAAACGCTCTGTCATGCCACGCCTTCCCCCTTACCAGGAGACGCAAAGGTTTTATCAGA Gene GeneID:767932|AZI2:NM_001077005:241_cdna Constitutive 2 NULL GeneID:767932 22 GENE AZI2 MGC127476 5-azacytidine induced 2 EMBV3_07180 GAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACGGGAAGCTTTCCATTGACGAAGAGG Gene BVT0102_168672 + 1 EMBV3_05864 GK000012.2:37794827-38310849 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00061487 TCONS_00166913 TCONS_00118040 TCONS_00061484 TCONS_00009083 TCONS_00061482 TCONS_00222867 TCONS_00166887 TCONS_00061481 TCONS_00040258 TCONS_00176420 TCONS_00223765 TCONS_00061490 TCONS_00031886 TCONS_00251792 TCONS_00061485 TCONS_00211020 TCONS_00115210 TCONS_00232829 TCONS_00061491 TCONS_00198299 TCONS_00147537 TCONS_00061483 TCONS_00207933 TCONS_00010280 TCONS_00188145 TCONS_00115209 TCONS_00251680 TCONS_00125692 TCONS_00175566 TCONS_00061488 TCONS_00031759 TCONS_00198820 TCONS_00000529 TCONS_00061486 26 XLOC_105290 XLOC_036985 XLOC_101749 XLOC_072206 XLOC_004639 XLOC_136174 XLOC_101723 XLOC_024074 XLOC_106198 XLOC_137064 XLOC_018131 XLOC_154733 XLOC_129530 XLOC_069472 XLOC_142312 XLOC_119956 XLOC_089424 XLOC_126448 XLOC_005831 XLOC_114188 XLOC_154621 XLOC_077234 XLOC_105347 XLOC_018004 XLOC_120473 XLOC_000141 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_03636 CCTTAGCACTTCTGAGCACTGCCTGCTGACCACATCCTCCTCTAGAATGTTCTGCCGCAG Gene GeneID:507689|EIF2AK1:NM_001038053:113_cdna Constitutive 0 NULL GeneID:507689 25 GENE EIF2AK1 MGC134528 eukaryotic translation initiation factor 2-alpha kinase 1 EMBV3_19010 TTCATCCACTGCCTTTTCTTGGGTTTAGTGTGTTTCCTAGAAACCTCTATAATGGAACTC Gene GeneID:520564|LITAF:NM_001046252:198_cdna Constitutive 1 NULL GeneID:520564 25 GENE LITAF MGC137407 lipopolysaccharide-induced TNF factor EMBV3_28570 CTACAGATTCCACGGCAGCTGCTGTGCCAGGTGATCACGTCTGGCTTATCGATGTTGCTG Variant GeneID:614734|LOC614734:XM_002697719:37_cdna 765^858 1 EMBV3_38255 GeneID:614734 24 GENE LOC614734 NULL similar to Transmembrane protein C18orf45 homolog EMBV3_29420 AAAATCACACTCAGTGACTTCACCGAGCCCGAGGAGCTGCTGGACAAAGAGCTGGACAGC Gene GeneID:531405|SORCS3:XM_002698472:512_cdna UTR3_Alt 2 NULL GeneID:531405 26 GENE SORCS3 NULL sortilin-related VPS10 domain containing receptor 3 EMBV3_00263 CAGCACCAGCATCTATAATTTGAATGACCCCTGGAGCCCCACCCTGGACTTCAGTGACTT Gene GeneID:100138645|LOC100138645:XM_002696032:499_cdna Constitutive 0 NULL GeneID:100138645 19 GENE LOC100138645 NULL similar to serum amine oxidase EMBV3_28343 GGAGATGCAGGAAGCCTGGAAGCTAGTGGGTGGCTCTGATGCAGAAAGAACTGTACCTTT Gene GeneID:768038|B3GALT4:NM_001077097:176_cdna Constitutive 0 NULL GeneID:768038 23 GENE B3GALT4 MGC138018 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 EMBV3_01786 TGAACCAGTTCCCAAGAGAATCCAGCATAGGGCACTGTTAACCATTTTATCTGTGCACCA Gene BVT0102_111604 - 0 NULL GK000026.2:34806485-34884317 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152213 TCONS_00152214 TCONS_00152215 TCONS_00152212 1 XLOC_092282 Coding TCONS_00152213 XLOC_092282 Coding Coding LOC535781 26:34882347-34927177 j TSS113575 5246 1 TCONS_00152213_7 609 15 0.883312141693993 0.0050735648524735 0.00414862735627216 0.00343537418746209 0.00258194785954307 0.00373713622542673 0.00138875323525375 0.00321632128056209 0.00198042585177865 0.00716252971845854 0.00047779221200512 0.00069157739905398 0.000234552558002583 0.00082066739109564 0.00173580474295454 0.00113063843069619 0.00899525820523044 0.00678848766268418 0.00765692625429227 0.00307428890596036 0.00361439822506685 0.00161985350698422 0.00173885187754568 0.00253922828624955 0.00434686389904667 0.00544567819650921 0.00363750976336919 0.00355094243883362 0.000705795128565634 0.000275119893501695 0.000526806019943602 XM_003584105.2 C26H10orf118 PREDICTED: Bos taurus chromosome 26 open reading frame, human C10orf118 (C26H10orf118), mRNA. 0.0 6462 99.86 0.68566526877621 NM_018017.2 C10orf118 Homo sapiens chromosome 10 open reading frame 118 (C10orf118), 0.0 3593 87.17 0.562714449104079 TCONS_00152213_7 sp|Q7Z3E2|CJ118_HUMAN CJ118_HUMAN Uncharacterized protein C10orf118; 0.0 1114 96.88 0.998357963875205 1 coding 0 0 0 0 -0.010852079944547 0.952028865494429 -0.0109997780668682 0.856640659213259 GGCCGGCTTCGGCGTCGCCGCCATCTTTGTTGATGTGTCAGCTCCGCGGGGGCTTGGGGCAGCCGCGGCTGAGGGAGCGTGCTTTTGGCTCTGTTCCCACCGCTCTCCCCACCGCCCCCGCACTTCCAGGTCTGCGGGGCCCCTCTATGGAGAAGTTGATTCCTGAGCGGTAGTTCCAGCGGCTTCTTTAGGGGTGTGGCCTGAAGCTCGGATCAGTGGGATGTAAGACGAAGATCAGGAGCAGATTTGAAGACGTACACAGTGAATCGGTGCCAGTCAGCATGTCGGAGACAGAGCACATAGCCTCCATTTCCTCTGATCAAAATATTGAGAAAACGTCGGAAACAAAGGAAGGCTCATGCAACTCTTCTTCTGGTGATGAAAGCAGCAGCTTAGAAAATGAGTCCAAACTGTTGTCATTAAACTTGGATAAAACTTTATGTCAGCCTAATGAACACAATAATCAAACTGAAACACAGGAAAATTATATTCCAGATCATGGTGGGGGTAAGGATTCCTGTGCTAAAACAGACACAGGCCCAGAAAGTTCTGAACAAATAGCTAGTTTTCCTGGTGGAGATTTTACAAAGCAAGTTTTGAAAACAAGTGAAGCAGAACAAACAGTCACACAAATATTGGCGGAATTAAGGTCATCTACATTTACAGCAGCAGGTAATCAAAAGACTTACTCAGAAAGTCCTTATGATACAGACTGCACCAAGAAACTTATTTCAAAAATAAAGAATGTTTCAACATCAGAGGATTTGTTGGAAGAAATAGAATCTGAGCTCTTATCTACTGAGTTTGCAAAAGAACACCGAGTACCAAATGGAATGAATAAGGGAGAAAATGCATTAATTATGTTTGAAAAGTGTGTGCAAGATAAGTATTTGCAGCAGGAACACACCATAAAAAATTGGAAACAAGAATAGAGGAACTTAATAAAGAAGTTCAGGCTTCCAAAGATAAAGTATTAGCTCAAGACATTGCAGCCAAAAATGCAATTCAGCAATTACACAAAGAGATGGCCCATCGGATGGAACAGGCCAACAAGAAATGTGAAGAGGCACGCCAGGAAAAAGAAGCAATGGTAATGAAGTATGTAAGAGGTGAGAAGGAATCTTTAGACCTTCGAAAGGAAAAAGAGATGCTTGAAAAAAAACTTAGAGATGCAAATAAAGAATGTGAGAAAAACACTAACAAAATTAAGCAACTTTCTCAGGAGAAAGGACGATTACACCAGCTGTATGAAACAAAGGAAGGTGAAGCTACTAGACTCATCAGAGAAATAGACAAATTAAAGGAAGATATCAACTCTCACATCATTAAAGTAAAATGGGCACAAAACAAATTAAAAGCAGAAATGGATTCACATAAGGAAACCAAAGATAAACTCAAAGAAACAACAACAAAATTAACTCAAGCAAAGGAAGAAGCAGATCAGATTAGGAAAAATTGTCAAGATATGATAAAAACATATCAGGAGTCAGAAGAAATTAAATCAAATGAGCTTGATGCCAAGCTTAGAGTCACAAAAGGAGAACTTGAAAAACAAATGCAAGAAAAATCTGACCAGCTAGAAATGCATCATGCCAAAATAAAGGAACTAGAAGATCTGAAGAGGACATTTAAGGAGGGCATGGATGAGCTCAGGACACTGAGAACAAAGGTAAAATGTCTAGAAGACGAACGATTGAGGACAGAAGATGAATTATCAAAATATAAAGAGATTATTAATCGCCAAAAAGCTGAAATTCAGAATTTGTTGGACAAAGTGAAAATTGCAGATCAGATACAGGAGCAGCATCAAAGAGGTAAACAAGAAATTGAAAATTTGAAGGAAGAAGTGGAAAGTCTTAATTCTTTGATTAATGACCTACAAAAAGACATCGAAGGCAGTAGGAAAAGAGAATCTGAGCTACTACTGTTTACAGAAAAGCTCACTAGTAAGAATGCACAGCTTCAATCTGAATCCAATTCTTTGCAGTCACAGTTTGATAAACTTTCCTGTAGTGAAAGTCAGTTACAAAGCCAATGTGAACACATGAAACAGACAAATATGAATTTGGAAAGTAGATTGTTAAAAGAAGAAGAACTGCGAAAAGAGGAAGTCCAGGCTCTGCAAGCTGAACTCACTTGTAGACAAACTGAAGTTAAAGCATTGAGTACCCAGGTTGAAGAATTAAAAGATGAATTAGTGACTCAAAGACGTAAACATGCCTCTAGTGTCAAGGATCTTACCAAACAACTTCAGCAAGCACGAAGAAAGTTAGATCAGGTTGAGAATGGAAGCTGTGATAAAGAAGTCAGCAGCATGGGAAGTCGTTCTAGTTCATCAGGGTCCCTCAATGCTCGAAGCAGTGCAGAAGATCGATCTCCAGAAAATACTGGGTCGTCAGTAGCTGTAGATAACTTCCCAGAAGTAGACAAGGCCATGCTGATTGAGAGGATAGTAAGGCTGCAAAAGGCACATGCCCGGAAAAATGAGAAGATAGAATTTATGGAGGATCACATCAAACAGCTGGTGGAAGAAATTAGGAAAAAAACAAAAATAATTCAGAGTTATATTTTACGAGAAGAATCAGGCACACTTTCTTCAGAGGCATCTGATTTTAACAAAGTGCATTTAAGTAGGCGGGGTGGCATCATGGCATCTTTGTACACGTCCCATCCAGCCGATACTGGATTAACATTGGAACTCTCTTTGGAGATCAACCGGAAACTACAGGCTGTTTTGGAGGATACATTGCTGAAAAACATTACTTTGAAGGAAAATCTGCAAACACTTGGAACAGAAATAGAACGTCTTATTAAACACCAGCATGAACTAGAGCAGAGGACGAAGAAAACCTAACGCAAAAGCTCTTCCTCAGTGAACAGACAAAAGCCACACACGGAGCAGGTGCCACTGCCCAGCACTGTTGGAAACTTCTCCCTGCTTTGTGTGTCAGCCAGTAAAAAGTTTGTTTTGCTTATCTGTATAAAGAAGTACCTTTTTACAATACAAATGCATTGCTGTGTGTACTGTAAGAATGTGAGCTCTGATGAAACTTGTTCTTGTACAGTGACAGCCTGTCATTGAATCTGAACCACTGAATTTAATTGGCTGATAGTCACATGAAGTGCTGAACATTACAACAAGGGCTTTTGAAAACCCCTTCTCCGTATTTCTTCCCTTTAAAATATATAATGTCAGAAATGATTTCACGTTCTAAAATTATGCATGAAAGGACAGGTGTTAATCATTCAGTAATACGCTATTTCTCCAACATGAATAAAACTAAAGAAATGAAGAAAGTTTTTGTTTTGACATTCTGATATAACATTTGCTTGTGTGTTAGGGACACCAGTGAGTTCTTAAATCCTTTGATCTTCATGGAAGCTGATAGGAAAGTGGCTCTCAGTGACCAGCAGGGATCGGGCGTGGATGCTTCTGTCAGGTTTCCTTATTTGTGCTAGGAACATTTTTTTCAGATGTGAATTGAGTTAATTGTTAAGTTTTTAAAAATCTCTAGTTACATAAACTATGATTTGAAATAATTTGCTCATTTAGAAAATTCCTGTGGACTTCAGTTGTATTTTAAAATGTGAAGTAAATTAGTCATTAGAACCAAGAGATGAATAACGAATTCTTTGAAACAGAAATACTTTAGTTTTACTGACATCAAGTATAAAGATAAATATAAGATACTTATGATGAACCAGTTCCCAAGAGAATCCAGCATAGGGCACTGTTAACCATTTTATCTGTGCACCATTCTTTACTGTTAGTTTACTTCCATGTTATAGTGGTGTGATCTTACAGCCCCTAAATGTGCTGTGTTTCGATATATTTATTTAAAACACAAAATAATTACGTCCTTGTAACCAAAGGAGTTTTAGAGCCAAATTTATGTATCCTATTGGATTTTTACAATATTTATTTAAGATAAGCACTCAAGTGTTGCTGGTCACAGTATCAGTATTTCTGTCACTGAATTTTTTTCTTGTCTCTTGTAATTTCTCACTGATTTTCTACATTTCGTTATATTCAGATCATTTCTGTAATGATACCTTGGCACATACACAGATGTTGCAGCAAGCTTCGTTTTTGTTTTGAATTTTTGCATCCTTCTTTTCCTCTCAAGAGAAGTAAGCATTGAGGTGATGGATTAAAAGCCTTTAAAGAATTGTATGGCTTTACCAGTTGGGCTGGGCTTTTGTTAGCAATGTCCCTTTAATGTATTTTAACTTTTTTTTTTTTTTAAATCAACTTAGCATTGTGTAAAAAGATCATTTACTAAAGGCTAGATGATTCATTGTACCATCTTATTTTTTCTGTATGTTGAGTTAATAGGTTTCATCCAAAAACAAAATCTTTTCACTTCAAAATGGAAATATAAGTTCAGAAACACTTTATATTTAAAATAGCTGTAAAAGTTTTAGTCTTACCATAATGTGTCTTTTTACCAGTAATAATTTTATCAAAATAAAGAAATGAGGGTAAGTGCAATCACATCTGAATTATTTTCCTAGTTGTTTTTGATAATAGTATTGATGCTCCCAAAGACTAGTCAATGTAACTAAATTTTTACAGCTTCTTATGTGATATAGGTTCATACACTACAGTATTTGTTTTTTTCCTTCCAAGACACAAAATATGTTAATGGAGACCAAACAGTGGTCAGATCTACAGTATTCTATGTCTGTACACTTTAAAAATATATATGTACGTACACACACACATTTTTGCATACATATATTGCATATGAAAATGAAACATTCCAATATTAACATTTGTGCCAGCATTCAAAGACGTTTAATGGTTAAACAGTTTTAGAAGAATGCAGTTATAAACCATATATTGACTTACTATTACTCCCCCCATAAATGTAAGGAACTGTGGAAAATTTGAAGAAAATGCTTTATTTTCCTTTTGTTCTTTAGTTTCTACTATATCCTTTTGTATATAGATCATGACTGAGCAAAAGTGTGTACAGCAAAGTGCATTTATCAGATCTCTCTCTAGACTGACCCACAGATCCTGATTAAGCATTTAGAAGGCAATATATGGAAAGAAGAATGGGGTGTCCAGAAAAGGAAAATGGTTGGATAAATGATAAACTTCTGGGAGAAATTTTGGTTTGTCTGTTTATTATTAATTAAACACATCAAAGGCTGTTTTTGTTAGCGCCATTTTGATTTCTTTGAGGAGGAAATTATTTTTGTGTGTGTGTATACATACACGTGCACTTTACTAGGTTTNN EMBV3_28044 GACACAACAGAAAGAGGAGTAACAAGCAAGAAGATGGCTTCAGCAGATCAGGAAGAGGGG Gene GeneID:536163|LOC536163:XM_002700132:77_cdna Constitutive 0 NULL GeneID:536163 X GENE LOC536163 NULL hypothetical LOC536163 EMBV3_02895 AGCATATCAGGAGGGGTTGGGGGAAGAGGAAACCCATTCAGACCTGATGACGATGGTATA Gene GeneID:512866|ERBB2IP:XM_002696290:23_cdna UTR3_Alt 2 NULL GeneID:512866 20 GENE ERBB2IP NULL erbb2 interacting protein EMBV3_23717 CAAGGATCGCGGGGCTTCGTGCACTGGCCGACCTCACAGCTGCCAGCAACATCATCTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03374 GAGATCCACTCTCATGGAGCACATCCCTTAATGAGTTGCCCTCGTGGATATTTTTGGAGG Gene GeneID:505383|DLG2:XM_002699051:46_cdna UTR3_Alt 2 NULL GeneID:505383 29 GENE DLG2 MPP2 discs, large homolog 2 (Drosophila) EMBV3_26244 GAACCCAGAGCTCACTTGTTGGCCTGTTGCTGGAATCCTAGACACTCTGAACAACTTCAG Gene GeneID:616308|LOC616308:XM_002699043:80_cdna Constitutive 0 NULL GeneID:616308 29 GENE LOC616308 NULL similar to tripartite motif-containing 43 EMBV3_22524 TTGAAAGTACACGCCCGTCCTCAGCCAGTCCAGACAAATTGGGTCTCCACTCATGACTTT Gene BVV0102_385695 + 1 EMBV3_09310 GK000027.2:33024354-33042467 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18762 GAGCCCAAGAAGACACTGGTGTGAAAGGTACAATCTCAGAGGTTGGTCAATTACCGTGGC Gene GeneID:507204|NLK:XM_002695742:431_cdna UTR3_Alt 2 NULL GeneID:507204 19 GENE NLK NULL nemo-like kinase EMBV3_41866 TATTTACAAAATCAAAACAAACGAACCACCCCCCGGGTACAAGGCAGCCATCCCAGACCG Gene GeneID:539180|RAB14:NM_001130754:16_cdna UTR3_Alt 1 NULL GeneID:539180 8 GENE RAB14 NULL RAB14, member RAS oncogene family EMBV3_24417 AGAGCTGGCCTCCCTGTGGCCCAGTGCTGGAAAATAAGACAAGGTGCAGATAAACTCTGC Gene GeneID:100125222|RAVER1:NM_001103108:258_cdna Constitutive 0 NULL GeneID:100125222 7 GENE RAVER1 MGC139960 ribonucleoprotein, PTB-binding 1 EMBV3_39052 CACTTGACAATTATAATGAAAATAATTTAGATGTATCTTTTGAGAAACATCACAAAAGGA Gene GeneID:510160|TTC30A:NM_001081716:23_cdna Constitutive 1 NULL GeneID:510160 2 GENE TTC30A MGC148417 TTC30 tetratricopeptide repeat domain 30A EMBV3_12233 CAATTGGTACTGGAGAGCTGTGGCTGGGGCATTGTACACCTTAAATGTCTTCTCAGCTGG Gene GeneID:535060|SEL1L3:XM_002688176:108_cdna Constitutive 0 NULL GeneID:535060 6 GENE SEL1L3 NULL sel-1 suppressor of lin-12-like 3 (C. elegans) EMBV3_07630 TTCCAATCAACTCCCAGCTTCCGCATATAGGATTGCTGCTGTTTAGTCGCTGAGTAGCGC Gene BVT0102_072986 + 1 EMBV3_05700 GK000007.2:102713081-103689128 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218212 TCONS_00218215 TCONS_00218216 TCONS_00218217 TCONS_00218222 TCONS_00218219 TCONS_00218221 TCONS_00218213 TCONS_00218214 TCONS_00218218 TCONS_00218220 1 XLOC_131650 Coding TCONS_00218212 XLOC_131650 Coding Coding SLCO4C1 7:103686162-103751569 j TSS162288 4712 1 TCONS_00218212_4 530 0.114601018675722 12 0.928141149130049 0.000701278658991134 1.89776119258107e-07 0.000139102260129089 5.26027161664478e-14 2.39101798506309e-05 3.75319349627509e-05 0.000181201502067432 6.64824208411161e-05 9.74507960190955e-05 3.36248101411905e-05 2.50595414460079e-09 8.34336732676678e-06 1.52937412224705e-06 4.50325761600533e-16 1.71597686199675e-06 0.000258852645337356 0.000650007667862892 0.000988951857479501 0.000293810087141594 0.000778195469776306 7.9574793161361e-05 0.000151270959085471 0.000139425383972491 0.000386096913178264 2.95375052092537e-31 0.00050781108167037 0.000355045315139307 1.00037157733609e-11 1.0003986900186e-12 4.64502153566468e-07 XM_005209756.1 SLCO4C1 PREDICTED: Bos taurus solute carrier organic anion transporter family, member 4C1 (SLCO4C1), transcript variant X1, mRNA. 0.0 3076 100.00 0.361629881154499 NM_180991.4 SLCO4C1 Homo sapiens solute carrier organic anion transporter family, member 4C1 (SLCO4C1), mRNA. 0.0 1802 82.08 0.382427843803056 TCONS_00218212_4 sp|Q8BGD4|SO4C1_MOUSE SO4C1_MOUSE Solute carrier organic anion transporter family member 4C1; 0.0 814 76.05 0.986792452830189 3 coding 0 0 0 0 -0.473306660608178 0.160554630533275 -0.106743170876492 0.109489772350934 AGCACACACAAGTCAATATGCTAAGTACTATCTACCTTTTAAAAGATACTTGCTTAACAGCAAAGAATAAAGGCAGCTGTAGCACTTCAAGTTCTCCACTTTTCTACTACTTGTATGTCTTTATTTTGGGACAACTGTTCCTGGGAACAGGAGGAACTCCTCTGTATACCCTGGGAACAGCCTTTATTGATGACTCTGTGCCCATCCACAAATCTTCTCTCTATATAGGAATTGGCTATGCCATGTCAATTTTAGGCCCTGCTGTTGGCTATGTGCTGGGAGGACAATTGCTAACCCTGTACATTGATGTTGATTTGAAACACAGCATTGATATCACTGAGGATGACCCTCGATGGCTGGGGGCATGGTGGATTGGATTTCTTATATCTTGGCTGCTTGCTTGGTCTTTGATAATACCTTTTTCTTGCTTTCCAAAACATTTACCAGGTACAGCAAAAATTCAAGAAGGAAAAGTTTCCCAAACTCATCAGAGTGCTTCCTTACAAGCTACAGATGGTAATTTTGGACAAAGTTTTAAAGATTTTCCAGCTGCTCTAAAGAATTTGATGAGGAATACTGTCTTTATGTGTTTAGTTCTATCAACTTGTTCAGAAGCCTTAATTACTACTGGATTTGCTACCTTTTTACCTAAATTTATAGAAAATCAGTTTGGATTGTCTTCTAGCTCTGCAGCTACTCTTGCAGGGACTGTTTTAATTCCTGGAGCTGCTCTTGGTCAGATTTTAGGTGGTGTTCTTGTTTCGAAATTCAAAATGATGTGTAAAAACATAATGAAGTTTGCTTTGCTCACATCTGTAATTTCACTTGTACTGACTTTTGTGTTTGCTTATGCCAACTGTGAAAATGAGCCATTTGCGGGTGTGTCTGAATCATATAATGGGACAGGAGAACTGGGAAACTTGACGGCTCCTTGTAATGCCCACTGTAACTGCCTGCGATCGTATTATTATCCCGTGTGTGGAGGAAATGGAGTCCAGTATTTTTCTCCCTGCTATGCAGGTTGTACACAATCTGTTTCCAAAATACATCCAAAGGTATATTATAACTGTTCATGTATTGAAGGGGAAATTCATATAACACCTACTCCATCAAGTGTTAGTCTTGAAGCTCAAGCTGGAAAGTGTTCAAGTCAATGTAAAAACTTGCCCCCATTCCTTGGTGTTTTCTTTGCTGCAATTGTTTTTACCTTCATGGCTGGTACTCCTATAACTGTGTCCATCCTAAGGTGTGTTAATCAAAGGCAGCGATCTCTAGCATTGGGAATACAGTGTACATTGCTTCGATTATTAGGCACCATACCTGGACCTATTATATTTGGCAGCACAATAGACAGCACATGTATTCTCTGGGATATTAACGAATGTGGAAATAAAGGAGCTTGCTGGATTTATAATAACGTCAGGATGGCCTATATGCTAGTGGCCATAAGTGTTATTTGTAAAATTATCACTGTTTTCTTCAATGGACTTGCAGTCTTTTTGTATAAACCACCACCATCAGTCACAGATGTGGCATTTCAAAATCAGAATGCAGTTTTGACTGCGGTTTCATTAGAATGTGATCTCAACAAAGCAGGGAATGACGGATGAAACAGCAAAAGAGAAGATTGAAAATCGGCCTGCATTTGTAAGAATTCATGTTATCACTGCAGCATTAACTATCCAATATGGGCAATCATATTTTAGAAACTGGTTTTTTATAATTAAATGTTTTTCTTTTATATGTATGAACTCTGAATTTGTTTTTGTTTTAATATAAGAAACAGACCTGTGCCTTCAAAGCCCATCAAAAGCGTCAGAACACACACACACACACACACACAGATGAAATCCCCAGCTAATAAACAATACTAGAAAGAAAAAGCCAATGTTTGCTTAACAGTTTACATTTTAAAACCAAAGTGATGTTTCTATCCCTCTTACAACTTGTTTTATTTTAATTATCATTGTCAGTAGTTTGGCCTTTTTAAGAAAATTCATGGTGTAAGAATTTAAATATATCTAGTCTAAGTTCTAAGTTTCAAGAACTATTATTGAAAGAACATGAATTTAAAACCATTTAAATAATATTATTTGTTTTTACATTTATATGTACTAGTCTGTCCTTGATTTATTATAGACAGTTAGTGAACTGTTAGAGTGTGGGTTACTTATCTTTTTTGTGTCCCAGTACATAGTGCATTCAGAAATATTGGCATTCTATACACATATCTTCACTTTAACTCAAGAATTCCAGGAAGTGATTTGTTGATATTGCTGATTTTTAACATTTTTATTATTCTGTGATAGTATTATTCAGTTCCATGTCTTCCAGAGGAAGGTGCCAGCTTCAGTAAAGTGCCAATTAGATAGGAAAAGATTTCTTTTTTTTAAAAAAATGGCTTATGTCCATTTTATTGATTTTCTTTAAAAAGCTTTCTTCATGAACTATGATCAGTGTTTATATACTCAGTAGCTCAACTTTTCTCGTTTGAAAAACAGATCACCTAGTACATTACTTAGCACATAAGCAGTGCTTTGCTTATAGTAGGCATGTATTATTGTTTGGTTAAAACATTAAACTGTACTTTTAACTAATCTGTGTATTTAAAGATTAAGTATTTCACATATATAGCATTATAATTCCATTTTTTCAGCTCAGACTTCAGCCAACTTTGTGTACTCAGAATTGTGGAGGAAATACATCAGTAAACATCAATAGAAATAACTTCTACCTGGTCAAGAACTTTACTGATTAAGAAAATTATTGAAGTTCATACCCATTTGAAATTTCATAAAATAAGGTTACTGGTTTGATAAGACTCATTATCAGCTTTTTCCTAGGTTAGCTGTTTACAATCAGTGTTTTATTGAGTAACAAAATGGGTAAAGGCCTGATAGGAGACCAGGATCAGAAGCACTAGTAATTCACAGAATTTTGAAGAGTTATATTTTGTGGTAATTGGTGGCCAGAGGCGATTCAAGAATTGAGTAGCATTTATAGATTGAGATGCAAGGAGTGAATTTGAAGTGAGGCAAGCAAGCACACGTGAATATCAGGGAATTGGAGGAGCAGTGGGTCACTCATCAGAGAGACAGATCTACTTAAACTAGGAACACGTAAGCGCCAAAGGCTGAAGCCAGAATGGGTGGTCAAAAACCCACGTGCTTGAGAAACAGGAAATGCGTAACAACCAAAGAGACAGTTCACAGTAGACAGGGGAACAGACACATGATACTCCCAATTCAGAAGCAGTCTCCCTCCTACCCAGCCACACACACACATTTTAGATTATTTTTTTAGTTTGGCTGTGTGGGTTTTCATTGCTGCTCAGGCTTTTCCCTAGCTGCTGGGGGCAGGGACCACTCTCCAGCGGCAGTGCTCAGGCAGGGACCACTCTCCAGCGGCAGTACTCAGGCTTCTTGTTGGGGTGGCTTCTCTTCCTGCAGAGCATGGCCACCTGGATGCACTTAAGTACTGCAGATCCAGGATCTAGAGCAGAGGCTCAACAGTTGTGGTAGGCGGGCTTAGTTGCTCCGTGGCATGTAGGGTCTTCCCGGACCAGGGATTGAACCCATGTCACCTGCATTGGGAGGCAGGTTCTTTATAATGAGTCACCAGGGAAGCACCACTCAGACACATTTTAAGTGTTTCTTAGAGGTAAGTCTAAAGGGAGATTTTAGGCTTTTTATATCCTATGTGTGGGGCTTCCACAGTGGCTGAGTGGTAAAGAATCTGCCTGCCAATGCAGGAGACTTGGGTTCAATCCCTGGATTGAGCAGATCCCCTGGAAAAGGAAATGGCAGCCCACTCCAATATGCTTTCCTGGAAAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCAAGGGTGTCACAAAAGAGTCGGGCGCTACTTAGCGACTAAACAGCAGCAATCCTATATGTGGAAGCTGGGAGTTGATTGGAAACATTTTGTAGATGTAAAATAATGGCAAATCCTCAAAAACTCATTTATAGAGTGGAAACAAAAACTATAAAATGTATTAGTCTAAAGCCACTTGAGAGAAAAGAAAAAAATCACTCTACTCATAGAAATAGTTGAATGAATAAGTCACTAAATGATTGGCATTCACAATGATTTTTAGTTATAAAGGGTTTCATTGTGTTCAGCATACTCAATTTTATTAGACGATAAACATTTTACAAAATTTGTAATGAAAATGATTAAAGTGAAAATAATTTTGGCACTTCTGAAAGAAGTCAGACTCATTTATAACATACATATTTACAAAGAATACCTCCTCTTACGCTAGGGCAATATAGACACTACTATAATTTTTAAACATTATTTTTTTGAAGTTACCTAGATTATATGAATTAGTATAATGCTACTTTTAGAACATAATTTTTTATAATATGTATTTTTCACAATTTATAATGATTTTTAAATTTGTAATTTGGTGATTTTTTTTGTACATAATTGAAGGTATGTCAAAATTTAACATTTGAATTTTCTTAATTGTAGGAAATACAAATGTAAAACCTTTATATATGGAAGGAATTGTACAATTGTTTAGCTGTATAAATTGGAGGAAAATGCAAATAAAATTTTAGCTCTATTTTTTCAGTTTTTATTATAAATAATTATGTGAAAACTATATATTTTAAAATATCAATATGTTTGTACTTGTTTAAGTGTTTAATCTTATTAAAGTCACAGATTTAAAAAT EMBV3_03464 CTGAGAACCTATTACCGGCTAGGTGACTTAATATAAAACGCTGTGAAGGAGAAAGAGGCG Gene BVT0102_028487 + 0 NULL GK000010.2:37161153-37193025 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020605 1 XLOC_011280 NonCoding TCONS_00020605 XLOC_011280 NonCoding NonCoding - 10:37182411-37183453 - TSS14495 1042 1 TCONS_00020605_2 69 1 0 0 7.71473782216779e-05 0.000834813924274876 7.96943508746988e-06 4.73817206617012e-06 0 9.51429952649358e-05 0 0.000658772798577207 0 4.39382985976727e-06 9.608350872615e-05 0 4.51439409588383e-06 0 0 0 4.81592652613596e-05 0.000151401561594466 0 0 2.84862293895586e-05 0 1.60888898035754e-05 1.32984268068506e-05 2.70460134719836e-05 5.62298300815146e-06 0 0 1.15398208192663e-05 0 noncoding 0 0 0 0 -0.154098872386614 0.390569130810856 -0.0273401699771335 0.585377559626046 CCCTCACCACCAAGGTGTCCTCACAGATTCTCCAATGTTAACTTGTTCTTCTGGGGATGCATCTCTGGCTAGACATGGTTGTTAACCAGTCATCGTTCATTTAGACTTTAGGATTAGATGCTTAAATAATAAGTCAACACAAATTTTATTTTTGCTTCAGAAAATGCAAATTTTATAAGAGGAAACCTTAGACTTTTGAGAGGAAGGCATTCTTGGATAAGGTGGGAGATTCTGAAAAGGTGGCTTCCAGGAAAGAGGTTCTTGGAGTCAGGGAAGAGGAGGAAGGTGTGGAAAACTTACTTTTCAGTTTTGCCTAGGATCTTGCATATTATTCTTTTGTTGCACTGGTAATGCTGTGGTTGACAGTGCTTGAATGCGGGGCTTCAGAGCAACTTAAGAAGTCCGTCAACGTTAGCCTGCATGTTTTCCATTCCATACTTATTTCAGCAGTTTCTCCTCATGGTGTGGCGTATCCTCTCAGGAAGAGCAGAAGGAAGAGAAAGAAGACCCTTCCTAATATGCCTGGAGTCCAGCACAGATTAATAAGTCTTGTTGGATAAGCCTCTTCTTGGCTCTTTTCTTGTAATCGCCTCTTTCTCCTTCACAGCGTTTTATATTAAGTCACCTAGCCGGTAATAGGTTCTCAGTATTTGCCAATTCTTCTAAGAGAGTGACAGGAAAGTGGAAACATGGACCACAGTTTATGCTCTCTTACTTCCTACTTCTCTTTTGCCTCTTTTCTCCCACTTTAAACGACTGTCTTTTTACTGGATGTTAGCAGAGAAGAAAGAATGGCTTGTAATGGGGGTAGGTAAGGGGTAGGGAAGAAGATATTTTTGATATTTGGTTGGGAGAAATATCATACCATCAAGTTAATTCAGCAGTTGCTTGAAACATCATACTTTTTTGTTTGTGCCTCATAGCTTAAATATCTCGAACAAACAAAAATTAAAAACGCAGGATCAGGGCATTAACCTTGGATAATACGCTCTATCGTGCAAAATTCTCATTTTCACGTTTTACTGTTTTTTATCGACATCTA TCONS_00013530 . 5' 111 TCONS_00013530 . 5' 111 EMBV3_18610 GTGACTACAGACAATCCCCACGTTGCCCAGAAATTGTTAGATGCGTCCTGCTGAGAAACG Gene BVV0102_128924 + 0 NULL GK000004.2:63305358-63430382 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188012 1 XLOC_114055 NonCoding TCONS_00188012 XLOC_114055 NonCoding NonCoding - 4:63306153-63307335 - TSS140380 1182 1 TCONS_00188012_4 121 1 0 0 0 0 0 0 0 0 0 0 0.000226262333158969 4.84177086651197e-05 6.05024219076233e-06 5.82595578121665e-05 0.00079991811225951 0 0 0 0 0 0 0 0.000182063833391295 0 7.09162811466949e-05 0 0 0 0.000219407688741251 9.0356554534193e-05 0.00025432560992484 0 noncoding 0 0 0 0 -0.147356727244995 0.259861827534986 -0.0283897582948764 0.602361134201185 TGTGCTCCAGCCCTAGGAAGGAGGAGAATATGGGACGCAGGGCGCTCCACCACCGCGGCTCGTTCCCTGATGCCCCAGCTTTGGGAAGGAGTGATAAACCCAGCGCCTGGGACGGGGTGGGGGTGCGGGCAACTTTTCACTCTGCTTTGCCTTCCTTTGGCTGGGGCACGACGGCCGACCGTCCCTGAGAGGACAGAGGGGCGAGGGGCCTTCGAGATCACTGCTCAGTGCTGCTGTGTCTGTGCGTCGTGACCCTGGGGAAGACGGAATTTGAAACGACACGCAAGGTCGATTAATACACGCACAGAGGCGAACTCTTTTCGCCGTTAAAAAAGAGGAACAGTGGTTCCATGACTCCTCCCATCCAACCTCGGGCGAACCGGGGCAGGGAGGTGCTGTTTGACTAATCATTCATTCACCCGAAAAAGAGGGAGGGACCCGCGCGGCGGCTAATCTCTGGCAGGGACCGCCGCGGCGTTCTCGGGAGCTTGGAGTTGTCGCTTCAGCAGCCCTGGGTGTCAAAGAGTCCGACCCTACCTACCGCCCAGGGATGATCCCGGCCAGATCACGGCCTCTCTCTCGAGCCGTGGCCCACTCTGCCCAAAGGAGGATATGCAACGGAGGAGAGAGTTTTTGTAACCAAATGGGAATTAGGGGACGCTTGGCAAGTATTGGGACCTGATGATCAGCTGTCTTCCGCGCTCACGTGGGTCCCCGGCTTCCTCTCCCTAAGAATGGAAATGGGGGCCCCTCACGCGGGTCCTCCTGGTGGGTCGGCCGGGGCCGATCCGAAAGGCAATCACGCACTAGCCAAGCACGTTTCTCAGCAGGACGCATCTAACAATTTCTGGGCAACGTGGGGATTGTCTGTAGTCACAGAAACTATACCTTTGCAAATATATTCGTCTGTTTGCCGACACATTTTGTACAGTTTCCTCTTAAGCTCTACCCCCTTTGGAGTGGGGGGAATGGGGCTGTTTATTTGTTTTTATTTTTTCGAGTCGTTGGAGGCTTCACTTAAGGCTGCAGTGCCCACATCCAGGCACGCCGGGGAGCCTATAGGAGCGTTGCTGTTAAACGGAAAAAATAAGAGAGAGTAAAGCTGTGATTAGCCTAACACGCTCCATTTCCCTCTCAAAACAGCTTTTTAGTGTAAAACTCAAATTAAAAGAGAAGAAAGAT TCONS_00184223 TCONS_00184224 TCONS_00184225 . 5' 797 TCONS_00184223 TCONS_00184224 TCONS_00184225 . 5' 797 EMBV3_22363 AAGCCTCACCCAGTCCTTTCCTACAGCTGGTGACCCGTTTTCCTTCATTATTTGGGCACT Gene BVT0102_349086 - 1 EMBV3_05218 GK000029.2:37684933-37695482 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23724 AAGCTTGACGGAACCCATGACGTTATCCAAATCGATCTCTCTTCCTCGCAGTGCCTACTG Gene GeneID:100336967|LOC100336967:XM_002697666:136_cdna Constitutive 0 NULL GeneID:100336967 24 GENE LOC100336967 NULL docking protein 6-like EMBV3_24562 AGATGATCTTTGAGCTGAGTCTAAAGGGACAGGCAATTCGGCATTCACACCCTCTGAGGC Gene BVV0102_109123 + 0 NULL GK000015.2:6209165-6278370 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19719 GTGGAAAACGAGTCCAACGTGTTGCAGGACGGCTCCCTCATCGACCTGTGCGGGGCCACG Gene GeneID:504839|PELI3:XM_002699356:252_cdna Constitutive 1 NULL GeneID:504839 29 GENE PELI3 NULL pellino homolog 3 (Drosophila) EMBV3_22800 AGCTCTGGGGAGCCACCCTACTCTTGCTTTTTGGTCTGACACCTGATAGGAAATTGAGAG Gene BVT0101_047512 + 0 NULL GK000014.2:32701126-32702917 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37920 GTCCAGCAAAGTTGAAGCCAGTGCTGATCGTTAGACTCGGAGTTCATTGACACACAGTAT Gene BVV0102_116984 + 0 NULL GK000014.2:78859058-78908044 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29676 CCCATGACACATCCTGTTTGGTCAGCTCCAGTGTCTCTCTTGCGTCTGAGTTTTTGTTGG Gene BVT0102_436264 - 1 EMBV3_02142 GK000023.2:19882825-19892714 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132684 TCONS_00132690 TCONS_00132687 TCONS_00132686 1 XLOC_080840 Coding TCONS_00132684 XLOC_080840 Coding Coding SLC25A27 23:19860577-19883939 j TSS99206 2276 1 TCONS_00132684_2 318 9 0.902957921321861 0.00120378992151856 0.00114434228697072 0.000994798780279695 0.0011526138696391 0.00150854058777286 0.000463519918801865 0.000550061867997521 0.000701021873015443 0.00150718369369074 5.04678113950803e-05 0.00013829677584034 0.000278633714002099 0.000263401539891279 0.000346352989451075 9.81496814162764e-08 2.10803521856028e-06 3.40948365859055e-44 0 5.74877934316393e-07 0.00104315753216041 0.000716989189636605 6.69455684289836e-05 7.63898263355964e-07 1.24446189136041e-06 0.00175389352883038 0.00173526729707099 0.000979686480996291 7.78408558125368e-07 3.44719087261777e-07 2.83993782467158e-08 XM_005223464.1 SLC25A27 PREDICTED: Bos taurus solute carrier family 25, member 27 (SLC25A27), transcript variant X1, mRNA. 0.0 4067 100.00 0.990333919156415 NM_001204051.1 SLC25A27 Homo sapiens solute carrier family 25, member 27 (SLC25A27), 0.0 1997 79.44 0.982425307557118 TCONS_00132684_2 sp|O95847|UCP4_HUMAN UCP4_HUMAN Mitochondrial uncoupling protein 4; 0.0 592 94.67 0.940251572327044 1 noncoding 0 0 0 0 -0.0812061685410801 0.628144187395776 -0.0217403069065009 0.72053949490526 GCTGTTTTCCGCTCCCCATCCACTGGGCTGTTCCAGCCTGGGGCTGCCAGGGAGGCTGCGGGTTCGTTGGGCCCGCCTGGCCGAGCCAAGCTAGAGAAATGATCCCCGCCTCGCTGCGTGTCGCTTGAGAAGGGGCCGCCCTGGCCCGGGTGGCAGGCCAGCCGCGGCGCGGGACGCGGGCCAGAAGGGGCGTATCGTCGTCCCGTGCTGCTGCTGAATGTCGACTCCAGACGATGCGGAGAGGCTCTCGCCGCTCGCCCAGAGATGGCCCCGCGCGTGCAAGTTCCTCCTGTCGGGCTGCGCGGCCACCGTGGCCGAGCTAGCAACCTTTCCCCTCGACCTCACAAAAACTCGACTTCAAATACAAGGAGAAGCTGCCCTTGCTCGGTTGGGAGATGGTGCAACAGAGTCTGCTCCATATAGGGGCATGGTACGCACGGCCCTAGGGATTGTCCAGGAGGAAGGCTTTCTAAAGCTCTGGCAAGGAGTGACACCTGCCATTTACAGACACATAGTGTATTCTGGAGGTCGAATGGTCACTTATGAACATCTCCGTGAAGTTGTGTTTGGCAAAAGTGAAGATAAGCATTATCCCCTTTGGAAATCAGTGATTGGAGGGATGATGGCTGGTGTTGTTGGCCAATTTTTAGCCAACCCCACTGACCTAGTGAAGGTTCAAATGCAAATGGAAGGAAAAAGGAAACTTGAAGGAAAACCACTGCGATTTCGTGGTGTGCATCATGCATTTGCAAAAATCTTAGCTGAAGGAGGAATACGTGGGCTTTGGGCAGGCTGGGTACCCAATATACAAAGAGCAGCGCTGGTGAATATGGGAGATTTAACCACTTATGACACAGTAAAACACTACTTGGTATTGAATACGCCACTTGAGGACAATATCGTGACTCATGGCTTATCAAGCTTATGTTCTGGACTGGTAGCTTCTATTCTGGGAACACCTGCTGATGTCATCAAAAGCCGAATAATGAATCAACCACGAGATAAACAAGGAAGGGGCCTTCTGTATAAATCATCGACTGACTGCTTGATTCAAGCTGTTCAAGGAGAAGGATTCCTGAGTCTCTATAAAGGGTTTTTACCATCTTGGCTTCGAATGCAATCTGATTGGATCACACAAGACCACCCAATGAGACCCCGGCACAGCGTTTTCTAAGGAAGGATCAAATCCTGACCACTGAACTTGAGCGAGAAGATTCAAGTTTGGGATGCTATGCTGTAGAGCCTGCTTAGAGGAGAAAGTGCCAGAAGGGAGACAGCATCTCAGACCTGAAGTGGACAGTAGGAATGTGGAAAAATACATCCATACATAGGGACCAAGGAATATACTTAATGTGTTGTGTCAGTATTTACAACTGAAATCTGATAATTTACTTTTGTGTTGTCATTAAAGTGCATATTCTATAAACTAAAGGGAGGTGAATGAATAAACATTTTGAGTTTCCCTAGTGTTGAAGGAGGTTGATGTACCTTTTCTTGCCAGGAGAGTGAAAAAAAAAAGTTTGGATCTCAAGGATAGAAGCCTCCTTCTCTCAGTGCCCTGTGATCTGTGTTCATTGGTTAGGTCTCTACCACATAGGCTAAGGACTTCCTGACAGTCAGAGAGACCACATCTGAATGAAAACAGACAAGAATGTCTGCTTTGTGATATATCCCATTCCAGCCTGAATTTGTCGCTAGCTCTCAAGAATCTCAATATATGAAAAATGGGGCTTATCTGATTAAAGCTCAGGTGGACAGGTCCTTTTAATAAAGAAACATCTGGTATCATCAGTCTCTCAGTGGCATTTAAAAGCAAAGGTAACATGAAGTCAGCCGACGTACAGCCTCTCTTAATCCCCCCCTCCCTAACACTAAGGGAGGGAGAACTCGCAAATCACACAAAGCTGTCTCTAGCCTGAATCTTATTCAGTCTGACAAAGCTTCCTGCCTAAAAAGAGATCGTGTAAACTGCCTGTGGTACACAATTATGTCTCCAGTCACTGAATCATATCCCTTTTCTTACATTCACCTCTGAACCACCTGTTTCCCCAGCCTCAGACACTGGGCATTTCTGGATGGATAGCTACAGTTATGGGAAAAGGCTGTAACTGTCAAATAGGAGAACTCCAACAAAAACTCAGACGCAAGAGAGACACTGGAGCTGACCAAACAGGATGTGTCATGGGTATGGATGATGTTGAATGGAAAAAAGTTTGTAAGTGCTCTGTGGTTGCCCTAATGTATAATCACTGCCATTTAAGAGGGAGAGTATACTT EMBV3_21124 TAGAATTCCCTTTAGTTTACAGTTATTCAGCAGAAGCGGGGACGGGAGAGTGTACTTTTG Gene GeneID:504480|SGK3:XM_002692686:75_cdna UTR3_Alt 2 NULL GeneID:504480 14 GENE SGK3 NULL similar to Serine/threonine-protein kinase Sgk3 (Serum/glucocorticoid-regulated kinase 3) (Serum/glucocorticoid-regulated kinase-like) EMBV3_27380 TGGAAACAGAGACATCCCCGCTCCTACAATGTTGGTTTATAAGTGGTTCCTGCTGATCTA Variant GeneID:540607|RNF121:NM_001102245:25_cdna 223^377 1 EMBV3_07999 GeneID:540607 15 GENE RNF121 MGC148368 ring finger protein 121 EMBV3_00541 GGCTGTGTATAAGAAACTCCCTTCCATGCCTGATGCTGGTTCCTGTGATGAGCTACTGAG Gene GeneID:784783|LOC784783:XM_002694386:229_cdna Constitutive 0 NULL GeneID:784783 17 GENE LOC784783 NULL similar to GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like protein TC4) (Androgen receptor-associated protein 24) EMBV3_05747 AAATTCCCTTACCATGTGCCAAGCATAGGGCTCATGTCCCACAGTCCATCAGCTCCAGCA Gene GeneID:539769|CNR2:XM_002685711:400_cdna UTR3_Alt 1 NULL GeneID:539769 2 GENE CNR2 NULL cannabinoid receptor 2 (macrophage) EMBV3_05941 CCTCACTATTGTTCATTTCTGTATCTTCATAGCCTGCAATTACCTTTCTGTACACTCAGT Gene BVV0102_114560 - 1 EMBV3_30359 GK000005.2:82656453-82675279 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32260 AGGAGGTGGAGGTGTTTCTTCCCCGGTTCACGCTGGAGGAGAGTTATGATATGGAAGAGT Gene GeneID:286854|SERPINB6:NM_174789:187_cdna Constitutive 0 NULL GeneID:286854 23 GENE SERPINB6 NULL serpin peptidase inhibitor, clade B (ovalbumin), member 6 EMBV3_23722 GACCCTGCTGCGACTCAGCGGAGTGCGACGTCTCTAGATGACACTGAGCTCCAGCTGCTG Variant GeneID:615755|RSAD1:NM_001098136:168_cdna 365^569 1 EMBV3_39276 GeneID:615755 19 GENE RSAD1 NULL radical S-adenosyl methionine domain containing 1 EMBV3_17944 GGAGGAGGGTGGATAACCTCTCTGGGCTTCAGATATTTTATTCTGGGAAAGTGGGAGGAG Gene BVV0102_197109 + 0 NULL GK000004.2:49615803-49867158 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183982 TCONS_00183987 TCONS_00183977 TCONS_00183981 TCONS_00183985 TCONS_00183988 TCONS_00183979 TCONS_00183980 TCONS_00183976 TCONS_00183984 TCONS_00183983 TCONS_00183986 TCONS_00183978 1 XLOC_111247 Coding TCONS_00183988 XLOC_111247 Coding Coding PNPLA8 4:49866234-49907595 = TSS137116 3873 1 TCONS_00183988_2 784 9 0.906576402321083 0.000505393226171224 0.000871179064481844 0.000164629409919382 8.60369229606841e-05 0.000372420399010021 3.85115172772517e-05 0.000386024486729992 6.92718529662743e-11 0.000578797216883988 1.84026160028606e-06 6.8451951305934e-05 7.80393125771189e-05 0.000115936493267771 0.000138456355367842 0.000144451752753124 0.00291879868942867 0.000592328610048184 0.00203835802900108 5.6974683097406e-05 0.00051164956770554 0.000149883978936588 0.00156669455655545 0.000865745870802457 2.38206602199188e-13 2.54754667284727e-10 0.000563537247991598 0.000419955410220761 0.000125071771733684 3.66063070274441e-05 0.000269521102506038 XM_005198042.1 PNPLA8 PREDICTED: Bos taurus patatin-like phospholipase domain containing 8 (PNPLA8), transcript variant X1, mRNA. 0.0 6983 100.00 0.999483604441002 NM_015723.3 PNPLA8 Homo sapiens patatin-like phospholipase domain containing 8 (PNPLA8), transcript variant 1, mRNA. 0.0 3871 87.10 0.826232894397108 TCONS_00183988_2 sp|Q9NP80|PLPL8_HUMAN PLPL8_HUMAN Calcium-independent phospholipase A2-gamma; 0.0 1435 88.41 0.998724489795918 1 coding 1 0 1 1 -0.154488814539174 0.296249005221079 -0.0121134233073577 0.859447525249374 ATGTCTATTAATTTGACTATAGATTTATATTATATTTACCTCCTTAGTAATGCGAGAAGTCTTTGTGGGAAGCAGAGGAGCAAGCAGCTGCCTTTCTTGTGCTCACCTGAACATTACTGGAGGATAAGCCACATCAGTCTACAGAGAGGTGTTCATATGAGCAGAATAAGATGTAAATGGACCAAAAGTGAAGCTCATTCTTGCAGTAAGCACTGTTCCCCCCTAAGCCACCATGGTTTACATCTTGCAGTCTTGAGACTTAGCACTTCTGCTCCCAAGGGACTTACAAAAGTGAGCCCTCGTATGTCCCGTATTAAAAATACTTTGAACTCTGTTTCAAAGGCTGTTTTTGGCAAACAAAATGAAATGATCTCTCGTTTAGCTCAACTTAAGCCAAGTTCTCGAATATTAAGAAAAGTGACAGATAGCGGTTGGTTAAAACAGAAAAGCGTTAAACAAACCATCAAGTTTCTGAAAAAGTATAGTGACAAGTCAGCAGAAAAGAGTTCTATTCCAGCAAAGGAAAGTCAGGTTATAGAGAAAGACGATATAGGTAAACCAAGCCTTTTTCATTACACAAGTAATATAACCACAAAATTTGGAGAGTCATTCTACTTTTTGTCAAGTCATATTAATTCATACTTCAAGCGTGAGGAAAAAATGTCTCAACAGAAGGAAGATCAACATTTCCAGGAAAAATCAGAACTTGAACTTAAAAAGGTTGAAGATGAGAAACCCAGTTCTCCAGATCCTGGCATCCTGTCTGATAAGAAGCTAGATTCAGAAGCTTCTTTATATTCTGAGGACAAGCCTGGAAGTCCCAGTGGAACACCTGAGGTTCTCCCCATTTCTACTAAACAGAGTATTGCTAACTTTCTCTCTCGTCCCACGGAAGGTGTACAAGCCTTAGTAGGTGGTTATATTGGTGGACTTGTCCCCAAACTAAAGTATGATTCAAAGAGTCAGTTAGAAGACCAGGAAGAGGCGACAAAAGCTGAGCAGGCTGTCAGCAAAGACAAAAACGCAGAGGAGAAAAGGCGGTTATCTCTTCAGCGAGAAAAGATCATTGCCAGAGTGAGTATTGATAACAGAACTCGGGCGTTAGTTCAAGCATTAAGAAGAACAACTGACCCAAGGCTCTGCATTAATAGGGTTGAAGAACTGACTTTCCATCTTCTAGAATTTCCTGAGGGAAAAGGAGTGGCTGTCAAGGAAAAAATTATTCCTTATTTACTACGACTGAGACAAATTAAGGATGAAACTCTACAGGCTGCAGTTAGAGAAATTTTGGCGTTAATTGGCTATGTGGATCCAGTGAAAGGACGAGGAATCCGGATTCTCTCAATTGATGGTGGAGGAACCAGGGGTGTGGTTGCTCTTCAGACACTACGAAAATTAGTTGAACTTACTCAGAAGCCAGTTCATCAACTCTTTGATTACATTTGTGGTGTAAGCACAGGTGCTATATTAGCCTTCATGTTGGGATTGTTTCATATGCCCCTGGATGAATGTGAGGAACTTTATCGAAAATTAGGATCAGATGTGTTTTCACAAAATGTCATTGTTGGAACAGTCAAAATGAGTTGGAGCCATGCATTTTATGACAGTCAAACATGGGAAAACATCCTGAAGGACAGGATGGGATCTTCACTAATGATTGAAACAGCAAGAAACCCCAAGTGTCCTAAGGTCGCTGCAGTAAGTACCATAGTGAACAGAGGGATAACGCCAAAAGCCTTTGTGTTCAGGAACTATGGACATTTTCCTGGAATCAACTCTCACTATTTGGGAGGCTGTCAGTATAAAATGTGGCAGGCCATCAGAGCCTCATCCGCTGCTCCGGGCTACTTTGCAGAATATGCGTTAGGAAATGATCTCCATCAAGATGGAGGTTTGCTCCTGAATAACCCTTCCGCATTAGCAATGCACGAGTGTAAATGTCTTTGGCCAGACGTCCCCTTAGAGTGTATAGTATCCCTGGGCACTGGGCGTTACGAGAGTGATGTGAGAAACAACGTGACGTACACGAGCCTAAAAACCAAACTGTCCAACGTCATCAACAGCGCTACAGACACAGAAGAAGTCCATGTAATGCTTGATGGTCTATTACCTCCTGACACCTATTTTAGATTTAATCCTGTTATGTGTGAAAACATACCTCTAGATGAAAGTCGAAATGAAAAGCTGAATCAGCTGCAGTTGGAAGGGTTGAAGTACATAGAAAGAAATGAAGAAAAAATGAAAAAACTTGCAAAAATATTAAGTCAAGAAAAAACAACTCTGCAGAAAATTAATGATTGGATAAAACTAAAAACTGACATGTATGAAGGCCTTCCATTCTTTTCAAAATTGTGATGAGTGTGTGCGTGTAGTCTCCTAACTGAATGCCTGTTAGAGAAGATCCACAGAATTCAATAAGGAATCGTGGGGTTCAGCATGACTTATCATCAAAATGCTCTTGAATTCTGGGGAATCCTGAAAAGACAGTGTTTGGACCAGCTTGCACAGTACAGAGAGAGTGTACTTGGTTACACAATTCATATGGAAATTAGGTTTTTATGATGTTAATAATTAACTGTGCTTTAGGAATCTTACTGTATTAGTTGGTTTTAGTACATATCGATGTTGTATTGTTTGATGTTTGAAAATTTATTAATATATGTGCCAAACAAGAACTGAAAACTATCACATTATACTTGGTATTTTTACTTTAGTCACCATAATCATGTTAAATTTATTTAATCATTGATTTTCTTTCATGTGGAAAAACTAATTTCTTCTTCATTACTTTAAACATTACTTAGGTTTTTGATAGCTACATTCTATGATCCAAATATTGCCTCCCACGATTGTCATGTGATCTAAACAGATGCAGAAAAAAAATGAAATTCTCTCTATCAAGGGACTTTTACATTTGAAATATGAAAGAGCCAGATACCGTTTTCTATTCCAAATATGTTTATTTCAACGTTGTTTGGTTCCGAAAGATAGGTGAAGTTCCAGTCAACCACTTTTCCCCCCTAAAATTTCAAGATAATGCTGTGTGTCAATTTTCTAGCTCTAGCTTATCATTCACTCATATAAAATTAATTATTTGAATTTACTGAGGAAATACCCCATCATTAGCAAAAACTAAACTGTAGAAATAATCTGTTAAAAGGCTGATGTCATTTTTAAATTATTTACTATTTATAATGTAGCCTGTCATCTCTTTGTAGCTTTGTCAACAGTATGCTTTAAAAAAATGTTAGGCTTGTTTTATCTTAACTCCTTTAACCATCTAGACTTCACAGAGATTAATAACATATACAGCAACTTGCATCATTGTTTATGCTAACCAAATTCATCTTTGTTGTGTTATCTATGTGCCATGTAAATCCTTTACCATGTTTAGATTTGTCAAGGAAAATGAAAAGAGGTGAGTGTCCTTTGCTTTCTCTACATAAACTGGAGCTAAACCCATTACTGTGTCTTTGCATCAGTGCTGCGTAGAGCCAGTGAGGCATGGTTCACAGATGCGAGGGGAGCTGAGAGTCTGGATGCTAATTTGGGCTGCGATGCACAGTCCTTCTGTTTTGACTTGGAGGAGGGTGGATAACCTCTCTGGGCTTCAGATATTTTATTCTGGGAAAGTGGGAAGAGCTAGCTGTAAAATTTTATTTACTCTTAGGGCAACTGGAAAGAAAATTCTACAATTGTAGAAGCAAAAGATTAGAAGAGATGTGAAAATGAATTTTCAGTCCTACAGAGGTAAAATATCTGCTCTTTTCAAAGAAGCAAAGAATTCTCTGTTTCAGAAAAAAAAAATGTAACAAATTATCCAACTCATCAATTACTTTAAAAATATAGAAAATAAAAATTGTAGCTCAGTCC EMBV3_23368 ATGCTTCCTCTGCAGTCTGTTCTCCTGAACCCTTTCCTGTCTCTTCCTAGCTTCTGGCAG Gene BVV0102_141162 - 1 EMBV3_10993 GK000024.2:57333274-57344498 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26439 TTGCAATTTATCGGACACACCTTCTTAGTGCTGCACAGGGTCACATGGATGAGGATGTGC Gene GeneID:281559|UACA:NM_174209:26_cdna Constitutive 0 NULL GeneID:281559 10 GENE UACA NULL uveal autoantigen with coiled-coil domains and ankyrin repeats EMBV3_29418 GATGAATTATTTTTCCTCTGCCCTGAGTACTTCCTGCCTCAACTCCACATGCGCACAGCC Gene GeneID:100336251|LOC100336251:XM_002694894:941_cdna Constitutive 0 NULL GeneID:100336251 18 GENE LOC100336251 NULL cadherin-5-like EMBV3_35640 CCGGCTAGCTGCCATTTGGCTGGAACTACCTCTTATCATCTTTGGTACCCTGGCATCTGT Gene GeneID:535665|SLC22A3:XM_002690372:31_cdna Constitutive 0 NULL GeneID:535665 9 GENE SLC22A3 NULL solute carrier family 22 (extraneuronal monoamine transporter), member 3 EMBV3_20827 CCCCATGGCTTCTCTCTGAGGAGGTGGGCAAAGAGTTCCTCTGGAGACGAACTTGTTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37399 CGACCTGCCCTACTTGCCCTCGGACTGGACGAAAGTCATCTCTTCGATCGTGGTGGGCCA Gene GeneID:100139567|SYCN:XM_002694982:162_cdna Constitutive 0 NULL GeneID:100139567 18 GENE SYCN NULL syncollin EMBV3_40471 TTCATCTGTAGCATCCAAGACTTCAAACTGAGTAAGAGGGACCATCTACTCATGAACGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10280 TGGAGGCATCATGGATCGCTTTGACTGCCAGTATCTGATGGCCACCTTTGTCAACGTGTA Gene GeneID:614834|CDS2:NM_001078046:41_cdna UTR3_Alt 2 NULL GeneID:614834 13 GENE CDS2 MGC142734 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 EMBV3_34977 GTGCCGGATGCAAGCCTCCCTGATGTCCAGAGCCTGTGGTCAATGCCACTGTTGTGCTAA Gene GeneID:505097|SMPD1:NM_001075187:13_cdna Constitutive 0 NULL GeneID:505097 15 GENE SMPD1 MGC139589 sphingomyelin phosphodiesterase 1, acid lysosomal EMBV3_08770 GCATGCAGCTTGTCCTCAGTTGTTGGGTTGCTGGATTCTTTGTCATCTTTCCACCACTCC Gene GeneID:788357|LOC788357:XM_002687619:745_cdna Constitutive 0 NULL GeneID:788357 5 GENE LOC788357 NULL similar to olfactory receptor 810 EMBV3_00528 TCAAGACATGGATGAAAAGATCAGATACAAATTGTGGATTTCCTGAAGAAGAAACGTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16052 AATGATGTGGGCTTCCTTGATGGCTCAGTGGTAAAGAATCACCCTGCCAATTCAGGGGAC Gene BVT0102_282643 + 0 NULL GK000012.2:54994491-55049152 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037084 1 XLOC_021290 NonCoding TCONS_00037084 XLOC_021290 NonCoding NonCoding - 12:55028121-55034275 - TSS26833 1840 3 TCONS_00037084_3 61 0.509239130434783 3 0.701446448886722 0.000162676905547234 5.46110593380325e-05 0.000181056417457217 0 7.78142858341037e-05 0 0 1.92870905423266e-05 0.000124355457100184 0 0 1.94330800191979e-06 1.55939275410485e-06 0 0 0 0 0 0.00028449830073511 0.000520792438891132 3.95964690223395e-05 0 0 0 6.58958243163667e-05 0.000126358968624067 0.000194244055850318 0 0 0 XM_005223069.1 CCR9 PREDICTED: Bos taurus chemokine (C-C motif) receptor 9 (CCR9), 1e-136 491 84.88 0.23804347826087 0 noncoding 0 0 0 0 -0.236227834868207 0.165377196151575 -0.0242047802681684 0.654388581544848 CTGGAAGCCTCCCTCTTTTAGAGTTTTCTTCCTCAGGTGATAACCTGCTTGGTGAGAACCAGATCCATGAGGTGGGGCACACAGCCATACTGCCATGGCTCCTTCTACAGGCAAATGTTGCAGAAATGGATTCCATTCCCAGCCAAAGCAGTATTTTATCTCTTGTTTTTCCTTTCCTCCCATTTGTTTCAACTTTTACTGAATTAAATAATGATGTGGGCTTCCTTGATGGCTCAGTGGTAAAGAATCACCCTGCCAATTCAGGGGACACAGGTTTGATTCCTGGTCCAGAAGAGCCCATATCCCACTGAGGAACCAAGCCCATCCACTGTTGCTCACTAAGCCCAGCGTACTGAGCTGTGCTTAGAGCCCAGAAACTACAACTGCAGAGCCCACGTGCCACAACTACTGAAGCCCGCTTGCCCTAGAGCCTGTGCTCCACAAGAGAAGCCACTGCAAGGAAAAGCCCATGCACCACAACTAGAGAACAGCCCTGCTCGTCGCAACTAGAGAAAAGACCTCCCAGCAATGAAGACCCAGCACAGTCAAAAATGTTTAGGGAAGACGAACAGATAGCAGAAGAGCTCTGGATCTGAAGGCAGGATGTGGGTTTAAGCCCTGTCTACCGCCTATGCTGGACAGTCACTTTGCTTCATTGCCTGCTAAGTCCTTTCAGTCATGTCTGACTCTGCAACGCTGTGGACTGTAGCCTGCCAGGATCCTCTGTCCATGGGGTTCTCCAGCCAAGAGTACTGGAGTGGGTTGCCATGTCCTTCTCTAGGAAATCTTCCCAACCCAGGGATTGAACCCATCTCTCTTTGTGAGGCCTCAATTTCCTAATGCCGGAGCTCAGTAATAATGATATAGGGTTGTTAGGATAATGGGATTAGGGGTCTGAAAAGCACTTTATAAAACATAAAGCATGTTTGAAATATTAATTATTATGATTGTGAAAGGAATAAGTGAAAACCTTAAGCAAATGATTAAATCAATTTTATATAACAATCATTTAGCATCCCTCTTTTAGATTAGAAATAATTTCCCTTAAGCCTTTCCTTGTTTGCCAGAATCAATCAGGTCTCACATCTCTGTCTAAAATTTAACTTGGTTACCATTATTCTGTATAGTCAAAGCTATGATTTTTCCAGTAGTCATGTATGGATCTGAGAGTTGGACCATAAAGAAAGCTGAGTGCTAAAAAACTGATGCATTCAAATTGTGGTGCTGGAGAAGACTCTTGAGAGTTCCTTGGACTGCAAGAGGTTAAAATCAGTCAATCCTAAAGGAAATCAATCCTGAATATTCATTTGAAGGACTGATGCTGAAGCTCCAATATTTGGCCACCAGATGTGGAAAGCCAACTCATTGGAAAAGATCCTGATGCTGGGAAAGATTGAGGGATGGAGAAGGGAGCAATAGAGGATGAGATAGTTGGATGGCATCATTGAGTCAATGGACCTGAGTTTGAGCAAACTCCGGAATATAGTGAAGGACAGGGAAGCCTGGCATGCTGCAGTCCATGGGATCACAAACAGTCAGACACGACCGAGCAACTGAACAACAAACCGTTATTCCAAACATGGTATTTGTCATCTAAACACAAAGCAAGTATGCCATTGTGGAGACATTCCTTTCCCCAGTGAACTCTTGAAGGAAGATATGATGAAAAAGCAAAAGGAAGGAAGCTATTAGGTATTAGCTCATTCATTCATTCTCCAGTTTAATAGAAGAGATGCAGACAGTAATGCCTTAAAAGACTGGATGCCGGAAAACATGGAATTCTTTTCCTCTAATGACTAATTTAAAATACAAAATGAGCTACTTCTTTCTTCAGGGAAAC TCONS_00035427 r 5' 20911 TCONS_00035427 r 5' 14878 EMBV3_18522 TCCCAGATAAGCATTTGTTCCGAGCTCAACAAGATTGAAGTAAGTTTTCGTGAGCTACAG Gene GeneID:517743|NOL11:NM_001034525:96_cdna Constitutive 0 NULL GeneID:517743 19 GENE NOL11 MGC128683 nucleolar protein 11 EMBV3_26707 TGACAACAGCGTCTTGCCTGTGACGGAGAATCAGATTGAGTCCAAGGCAGCCTATGTCCT Gene GeneID:512381|LOC512381:XR_084095:76_cdna Constitutive 0 NULL GeneID:512381 27 PSEUDO LOC512381 NULL similar to USP11 protein EMBV3_08030 TTAAGTAGTTGGGACATCTTGGACCTGGAGATAACAGCCCTTAACCCGTCCTTACCAGGG Gene GeneID:617367|RRAGC:NM_001076456:310_cdna Constitutive 0 NULL GeneID:617367 3 GENE RRAGC MGC139373 Ras-related GTP binding C EMBV3_21804 TGACTCCGCCAGGTCAAGTCCACAGACCGACAAGCCCAGGCAGAAAATGGGAAAAGAAAT Gene GeneID:538818|DAB1:XM_002686368:150_cdna Constitutive 1 NULL GeneID:538818 3 GENE DAB1 NULL disabled homolog 1 (Drosophila) EMBV3_03621 TCAAGTCTGCACTACCACACCTTGCATGCTCCGAAACTCTGACAGCATACTGGAAGCCAT Gene GeneID:784097|LOC784097:XR_084142:18_cdna Constitutive 0 NULL GeneID:784097 X PSEUDO LOC784097 NULL similar to NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial precursor (NADH-ubiquinone oxidoreductase 24 kDa subunit) (NADH dehydrogenase subunit II) EMBV3_29059 TGCTCATCTGCCTGGCACTGGCCGTGCTGGCCGTCTACCTGAGTGTGCTGCAAAGCGAAT Gene GeneID:616532|LOC616532:XM_002697074:590_cdna Constitutive 0 NULL GeneID:616532 22 GENE LOC616532 NULL hypothetical LOC616532 EMBV3_25081 ATTGGGACCTCAAGAGAGACGTAGCCAAGAAACTGGAGAAGCTGGAGAAGCGGACCCAGA Gene GeneID:617519|CCDC12:NM_001076466:164_cdna Constitutive 1 NULL GeneID:617519 22 GENE CCDC12 MGC140772 coiled-coil domain containing 12 EMBV3_23200 TCAATCCTGGACAAACAGGCAGATTCCCTCACAACCTAGAGATCCTCACAGGGAGTGCTG Gene BVT0102_155850 + 0 NULL GK000010.2:89604840-89619637 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018388 TCONS_00018390 TCONS_00018391 TCONS_00018389 1 XLOC_009244 Coding TCONS_00018390 XLOC_009244 Coding Coding TMED8 10:89614518-89645295 j TSS12385 6033 1 TCONS_00018390_3 257 0.110558594397481 6 0.804165583571614 0.00346152779106855 0.00268045320594962 0.00304450539094101 0.00269952874854611 0.00224747328164914 0.000624013734788015 0.00158877156183802 0.00163834448035906 0.000948976053142313 0.000252439067755421 9.70102421969536e-08 4.97427746098495e-05 0.000285846846212077 0.00134906602406569 0.000169209569560168 0.00332759363743176 0.000885460644604303 0.00280816776877834 0.00254763168146339 0.00430509102627834 0.0017048131227943 0.00157940982508881 0.00114813224287136 0.00210561114277577 0.00343879938403084 0.0036542301795632 0.00238951166706971 0.000380169127210918 0.000112217002571968 0.000231078266371272 NM_001193012.1 TMED8 Bos taurus transmembrane emp24 protein transport domain containing 8 (TMED8), mRNA. 0.0 1563 100.00 0.143378087187137 XM_005267544.1 TMED8 PREDICTED: Homo sapiens transmembrane emp24 protein transport domain containing 8 (TMED8), transcript variant X1, mRNA. 0.0 2554 75.00 0.643460964694182 TCONS_00018390_3 sp|Q6PL24|TMED8_HUMAN TMED8_HUMAN Protein TMED8; 2e-158 448 88.72 0.996108949416342 1 coding 0 0 0 0 0.0127781056069061 0.91273389785983 0.00307666737301681 0.950656452305778 CATCCTCCAGTGCACAGGACTGCCCCCACACAGAGGATTATCTGGTCCCAGAGGATGAAGATGTAGAAAACACCAAGGTCACCTCTGTAGCAGCTTCTGCCTCTGATCCAGAGCCCGATTCGTCACCCTACAGGTCACAGATGGTGTCTCCAGTGACAGAGGATGCCACAGAAGATAAGCAGAAGGCTGCCCGTGCCGGGGAGGCCCAGGCCTCGGTGGAACAGGAATTGCTGTCTGCTGACCAGACCCAGATCCTCAGCAAGATGGCCAGGTACCACGGCCCACAAAGGTCTGGGGACATCGTGATGATCCAGTCTGAGCACACAGGAGCTGTCGATATTCTGTCAGCTGATTTGGAATCTGCAGACCTGCTGGGGGACCACAGGAGAGTCTCCCCACCTCTCATGGCTCCTCCGTGCATCTGGACCTTTGCCAAGATGAAGGAATTCAAGAGCAAGCTGGGCAAAGAGAAGAACAGCCGTCTGGTGGTGAAGCGGGGGGAGGTGGTGACCATCCGGGTGCCAACCCATCCCGAGGGGAAGCGTGTCTGCTGGGAGTTTGCAACTGATGACTATGACATTGGCTTTGGAGTTTACTTTGACTGGACCCCGGTAACCAGCACCGACATAACGGTGCAAGTCAGTGATTCCAGTGAGGATGAGGACGAAGACGAGGAAGAAGACGAGGAGCTCGAAGACCCCGTCCCAGCTGGAGACGTGGAGCGAGGCTCCAGGAGCTCCCTGCGGGGCCGCTACGGGGAGGTCATGCCCGTGTACCGCCGGGACAGCCACCGAGACGTGCAGGCCGGCAGCCACGACTACCCCGGCGAGGGCATCTACCTGCTGAAGTTCGACAACTCCTACTCCCTGCTTCGCAACAAGACTCTCTACTTCCACGTCTACTACACGAGCTGAAGGCCCGCCGGGACGGGACGCAGGTGGCGTGCGCCGGCTGGAGCAGGCTGCCAGCTGGGGCCTCTTGTCCTGGATAGGCAAGGGCTCCAAGCTGAGCGTGGGGCGCCCGACCCTCCCGCCTTGCTGGCGGACCTGACTGTTGGCCCCATCCGTGTAGCTTTGCCCCGTCCTTGGCTTCCGCAGATGGTGGCGTGGTACCCCTGCTCTGTGGTCCCTGACTCACGCTCTCGTTGCTTCCGACTCCAGCAAAATCTCTCTGCGGAGGACACCCATCAGGCCAAAAGCCTAAAAGGAAGTTGGGTGTTGCCTTTTCAAAATAGGTTTGTTTTGGTTCCAGGTGTATGCTTTCAACTGCTGCGCTCTCCTCTTGCAGAGCCTTCACGCAGGCGAGTTTAGTGGCCACCCACTCTCTTCACTTTTCGAAAGGACAGAAAGAGGGAACAGCACTCTGTCCGTGAAGGAGCCCAGTGTCGGGGATGCGGAAAGCTCTGGCCAGCCTCTCACCACTGCCGTATTCCCGCCTGCTGGTTCTGCCCGTTCTCTAGCACAGGCTGGGAGCCCTCACTGCCTCTGGAGGGCTGGTGATTTCACCCTGCCTCTCCTTCTCTCCTTTCCCTTTTCTAAGTCTGTGCCATCACAGCAAGAACTTCCATGCAGTCCAAAGTGATGATCCCTGTAGTCTAAGCTATTCTGGGAAGAAAAACTGCCTCCATCACTTCCTATTTCAAGAGGCGGTGTTCCTTTCCAAGGGCCCTGGGGGTGGAAGGGGGAAGGGTGGAAATTAGGTACTGGGTTGATCTCAGATGCCACATCTCCGGAAGTCAAGTGTTACTAAATCATTTTATGTATAATCAAAGAAGGAGGGGTAGATAATCTGAGAGAAGAGGTTAAAAAACAAAACAACACTCCAGATTCCCCACTGCTTTTTTTTTTTTTTTTCGTCTTTAGAAAATGGGTGATATTTAGAAATTTTGCTTTGGGACCAGTCAGATTTCCTAAGTTTCTAGATGTCTAGGTTGCTTGCATTCAGGGCTACAGGCTTTTGGTGTTCGAAGTCTCGAAGGGGAGGTGGTCATGAAGCCTCACTGCTGCTGCTGGTCGGCTTTGTTCTTTTACCAGGCTGAAGCCTGTACGTTCCCTGGGGACGGCCTTTTCCACGCCATGAAGCGGGCGTGCCGCGGGGAGCTGCCTCCCGTGTCCCCAGAGGCACGTGGTGGCCAGGCCCCGCCCCAGCCAAGGAGGAGGCACGTCTGCGACCATGTACCTCCTCCTCTTATTCCTTGCGTCAAGCCTGTTACTACTGCCTTAGAATTCTGAGGAAGAATTAGATTTATTTATTACTTTTATTTATTGTTAAAGCCACATTTCACTTCACCTTTGAAACAGTTCCCATCTGTTTCTCAGAAGGCTTCCTTCCACCTGCCCTGAGACACCGAGGCCCCCTCTCCTGTGGAGTCTAACTAAATGGAGATTTCAGGCAAAGACGGGGAGGGCTGATGTTCCACTCCTGTGGGGTCAGTCCCCGTGAGGCTCTGGGAGGGGTCTGCCCCTCCTGAGGTGGACGAATGATGCCCCCCCGACCCCAGCCTGCTGCCCGCAGCACTCCCTGTGAGGATCTCTAGGTTGTGAGGGAATCTGCCTGTTTGTCCAGGATTGAGTGAGTGTAGAGGACTTGACCAGCCAACCAGAGGCATCCTGTGATGCCAGGACTGCCAAGCCCTCCGCCTGCTCTGAGGAGTCAGCTGCGTCACGATGCTTCCTTTGGCTCCTTCCTTCCCTGTGTGGGAGCCTCACACCACGCCTCCCCTCTGCACAGAAGCAGAAACTCAGCGACCAGGGCTCCCCACGACAGGTCCGTAGCGGCACCTCCGTCACGAACAAAGGGCGCTAGAGCCGCACCGTCTGTTCCTCCGGGAGCACAGCCCCAGGTGGGAGAGGATGCGGGGCCCACCGTAGCATCCCTCCTCCTCCACGCGGCCTCATACCTCCATTACTTTACGTCTGAGTGCGTTCTGTAGAGGATTATACACTGGCCCAAATCTCTATGCCCTGTAAGAAGTTAGTAACTATTCTAGCAACTGCCTATTGAGGCGCTGAAAGCAAACTCGCTGTGCGGTCATCCCATCAGGTAGCCGTGTGATCATCACTGAAATTGAATCATGCCTTAGCTAATTGAATAGAATCTTTATAAAATAATTTTCTACCGAGCTCTTCTCCAGTCAGCTAAAGGCTGGCTTATTTTTCCTGTTTATTGTTAACTTCCGACTTTCTGTTAAGACGGAGCTGTCAGGTCATTGGAGGCTCCCTGGGATGACACTTTCTGTTGTTGATTTTTGCCACGAGAGTCTCTGTATACTTGTTTTCTTTAGAATCCTAGTTCTGTTGCATCCGGGAAGCCTGAGGGACTCGTTCCCATCGCCTCAGTGTGCCTGTTATTGTCTGGTCACTTTTGAAGTCCTGGACATTGTTATATTTCATTCTGTACCTGTGTTTCGTTAACAGTAAGTGCTTCTTTGATCCATTCACACACACACACACACACACACACACACACACACACACAAATAGCTAAAAGAAGATATTTTCACCATCTAATGAATTTACTATCCCATATTAAGTCATCTGAAATTACTGAACTTTGGGGACAAAATATTACCTATAAAACACATGTAATTACTGAGAATTTCATGGTTCAGCAAACCCTAAGAGGTCGTCACTTCCTTAGTCTCTCTCTCTCTCTCTCAGTTTACGGAACCAAACAATGAAGTGAAAATCACTTGCTTTCACCTTCACCCTGTTCTTTAGAGCATAAATATTAATGTACAATGCAAAGAAAGTACTTCCCAGTAGGAGAGACTGGAAGTCTCTCCACAAGGTGGCCAAGTTCTTAAGTTTCTTTGGTTTATTTAGTTTTGCTACTTTGTTGAGAGATGGGACATTTAGAAAGTTTAGGGTGTTAATTTTTCTCAACATTTTATTTTGAAAAATTCTCAGCAAACAACATTTAAAAGAAGTATAGTATAAGCACCCTTATGTATATCCATCACGCAGATTTTAAAATTATAAACTGCTAACTTTTAAACAAAGATGATTCTGCTGTTCTGTTCCTTTTGACAAGTGTCCGGTAGAGTATTCCCTTCACAGACATCACCTCTCCAGTGTCAGAGAGTTCCTGGTTTTTAGCAAACTCAACTCATTCAGTGCCAGTTAACCATGGAGGTGATCCTCATAAAAATGTTTCCTGTTCTCCATTTTTCAGAACTCATGCTATATTTTCCCTTTTGTACTCTTGCCTGGAGAATCCCAGGGACAGAGGAGCCTAGTGGGCTGCCGTCTATAGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGCAGCAGTAGGCTCTAAAAGCTAATGTTTTCTTCTCTATCTGGCATGTCAGAGTGAAGGTAATTGTGAAACTGCTTTCCACTGGAAGGACTTTTTTTTGATCTCTGTTGCTTTCCAACATATCCTCAGGACTGAAATTAACACTCGGATCCTCAGACATAATGTAGCTTTAAAATGGAAGTAGGTAGTAACTTGAAATTAGGCCATTCTTAGTTTTTTTTTCCTTAATTGATTCATGCACTTTAAAAATATTTTTATCTGTTATTTAGGAAAGAAAATCTTATACTTTTAAAAAGTATATATTGTCCCTTATAATATATATATGGAAGAGTTTTAACTGAAAGTTTCCTGAAAGCTCACTATCTTATTTTAATCAGTGGGTTTAGATATTACTATAAAACATCATTTATAGAAAATACCTGTATGTTTTTGATGAGCCCTATCCAGTCCCACTTTGAAAGAAATTAGGTGAAACCCAAACCCAAAATATTTTTATGTTTAAGACCACTTTTCTGCAGAATGTTGCCTTTTAACCCCAAAGTATAAGGTTCTAAGGTACAGAGCTGAGTGACCCCTAACATTTACACAAAAGGCTATCGTTTTAGAGGAAGGGATAGGAGTGAAAAGGATCGTGCAGCTTGAGGAACTGCTCTTTTTTTTTTTTTTTTTACATTGATAGTAAGGAATGAAAACGAGAGAGAGAAAAGCTATTAAATGTATCCCAGAATCTTGCTCATATACTGATTCTGTGTAGTTCTTTAGTTTGCTTTTCATCCATTGAAATTTTTCTTTTGGCCAGAAACCTCACTGGTTCTCACTGTGCTTGTTGGAGACATCCCAGACTCACTTTGCTTTCTTTTCCAACAAGATTGCCTTTGGAAATATTTTTTTTTTTCTAATTTTATTTTATTTTTAAACTTTACATAATTGTATTAGTTTTGCCAAATATCAAAATGAATCCGCCACATGTATACATGTGTTCCCCATCCCGAACCCTCCTCCCTCCTCCCTCCCCATACCATCCCTCTGGGCCGTCCCAGTGCACCAGCCCCAAGCATCCAGTATCGTGCATCGAACCTGGACTGGCAACTCGTTTCCTACATGATATTTTACATGTTTCATTGCCATTCTCCCAAATCTTCCCACCCTCTCCCTCTCCCATAGAGTCCATAAGACTGTTCTATACATCAGTGTCTCTTTTGCTGTCTCGTACACCGGGTTATTGTTACCATCTTTCTAAATTCCATATATATGCGTTAGTATACTGTATTTATGTTTTTCCTTCTGGCTTACTTCACTCTGGAAATATTTTTGAGTAGGTCTCCTCTGCTAAGTGTAACCCTGACCTGAGGATTGACTTCACCTCTATACCCTCTGGGACTTGTGGGTCCAGCGCCATGAAAAAAGATGGTGACTTTAGAAAGGCTAGGAGGAGTTCCTGCTATGTCCCCGTAGCCTCAGTTGGTTTTGACTATGGCCAAAAAGGGATGAAACAGATTCATTTTGACCAACATCCCGGAATAGCCTCAAGCCACAAAACTTTTTGTGAACGAGCTGTGCCCTCTGTAGGCTGACCTCCCTGTGAGGGGTAGGAATCTATTTCCCTTTCATCTTGTGTGGGCCAGTCATACACACACAGTCAATGGGACCAACAGACAGACGCAATTTGGTCTTCCTTTTAGAGCCTCCATTTAGAATCTCTCCTGGGTCGAAAAAGTTCACACCAACCT EMBV3_00156 GGAACAGCTTGTGCCGGATGTCCCCTTTGGCTGTCTGGCCGTACCTTAGAAACTATTTAT Gene BVT0102_043839 + 0 NULL GK000015.2:65541210-65548290 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062165 TCONS_00062166 TCONS_00062167 1 XLOC_037224 Coding TCONS_00062167 XLOC_037224 Coding Coding ABTB2 15:65546893-65736070 = TSS46132 4922 1 TCONS_00062167_5 1025 17 0.974071763860109 0.000856240208069073 0.000843431039038122 0.000114966256917503 1.5464016005475e-07 3.9476425511804e-08 0.000165246644253713 0.000112016761358152 3.58527040127349e-08 2.09081398976677e-05 4.92898188082874e-05 8.15687785873726e-06 9.26020736204476e-11 6.07641071019976e-08 7.68007018269817e-16 6.01372928737254e-06 0.00105833431929374 3.40436709455038e-07 0.000306729789628966 0.000781068601088397 0.000788855068797432 3.71914832639049e-05 2.08318940517864e-14 0.000263118609195081 2.42321673848183e-09 0.000634925258443959 0.000766233306360561 0.000504097559762182 6.55135102932644e-06 5.04060150432122e-10 2.15868693024748e-27 XM_003587004.2 ABTB2 PREDICTED: Bos taurus ankyrin repeat and BTB (POZ) domain containing 2 (ABTB2), mRNA. 0.0 8877 100.00 0.999796830556684 NM_145804.2 ABTB2 Homo sapiens ankyrin repeat and BTB (POZ) domain containing 2 (ABTB2), mRNA. 0.0 4855 90.55 0.713124746038196 TCONS_00062167_5 sp|Q8N961|ABTB2_HUMAN ABTB2_HUMAN Ankyrin repeat and BTB/POZ domain-containing protein 2; 0.0 2021 96.98 0.999024390243902 6 coding 1 1 0 0 0.246603118261863 0.568444009829067 -0.0480916415582816 0.407696050038406 CAGCTGTGCAGGCGGCTGGCTCCGCGCAGAAGTTTGCAGAGAGCTTTCTCGCAGGTCGGTCCCGGACTCGCGCAACGCCGGGAGCCGCCTCCCTCGATCGCCGCCGCCCTGTTTTCTCGGGGTCCCTTCTCTGCGGAGAATAGACGCTCTGCTTCAGGAAAGCTGAGGTGGACCAGGCGGGTTGCGGAGGAGGAGCAGCGGAGGATCGTTCCAGTGACAGCTCGGAGTCGGGACGCCGGGAGCGTGGGGCTCTGGCCGCCGCGAATCTCGCCCACCTTCCTGCGGCCGCCGGGTAGGCGGGCGGGCGATGCGGCCGCCGAGCCCCGCGGTGCCGAGAGAAAGGAGGGCGCCCCGGAGAGCCTAGAGCTTGTTTCTGCCCACTTGGGGAAGGGCGCATGGAGTTGTGAGCGCCCCTCGCTCGGCGAGGCCGCCCCGGGCAGGCTCCCCATGGCCGGGACGTACAGCTCGACTTTGAAGACGCTGGAGGACTTGACCTTGGACTCCGGGTATGGGGCCGGGGACTCGTGCCGCTCGCTCAGCCTTTCGTCCTCCAAGTCCAACTCGCAGGCGCTCAACTCTTCGGCGCAGCAACACCGCGGGGCGGCCTGGTGGTGCTACTCCGGCTCCATGAACAGCCGCCACAACAGCTGGGACACGGTGAACACGGTGCTCCCCGAGGACCCCGAAGTGGCCGACCTCTTCTCGCGCTGCCCGCGCCTGCCCGAACTGGAGGAGTTCCCCTGGACCGAGGGAGACGTGGCCCGGGTCCTTCGCAAAGGTGCCGGCGGCCGGCGGCAGCCCCTGTTCTCCGCCGAAGCGGTCAGGCGCCTGGCGGGGCTGCTCCGCCGGGCGCTCATCCGGGTGGCCCGCGAGGCGCAGCGCCTGAGCGTGCTGCACGCCAAGTGCACCCGCTTCGAGGTGCAAAGCGCCGTGCGCCTGGTGCACAGCTGGGCACTGGCCGAGAGCTGCGCGCTGGCCGCGGTCAAGGCCCTGTCCCTATACAGCATGAGCGCGGGCGACGGGCTGCGCCGGGGCAAGTCGGCGCGCTGCGGCCTCACCTTCTCAGTGGGCCGCTTCTTTCGCTGGATGGTGGACACCCGCATCTCCGTGCGAATCCACGAGTACGCGGCCATCTCGCTCACCGCCTGCATGGAGAATCTGGTGGAAGAGATCCGGGCCAGGGTGCTCGCCAGCCAGAGCCCCGACGGCGGAGGGGCCGGAGGCGGGGAGGTGTCCGCTGAGGCCCTGGAGATGGTCATCAACAATGACGCCGAGCTCTGGGGCGTCCTGCAGCCTTATGAGCATCTCATCTGTGGCAAGAACGCCAATGGTGTCCTCTCCCTCCCCGCGTACTTCAGCCCCTACAACGGGGGGTCCCTGGGCCACGACGAGAGAGCCGACGCCTACGCGCAGCTGGAGCTCCGGACCCTGGAGCAGTCCCTCCTGGCCACCTGTGTGGGGAGCATCTCTGAGCTGAGTGACCTGGTCTCGCGCGCCATGCACCACATGCAGGGCCGCCACCCGCTGTGTCCAGGCTCCAGCCCCGCCCGCCAGGCCCAGCAGCCGCCCCAGCCCATCACCTGGTCCCCCGACGCCCTCCACACACTGTACTACTTCCTGCGGTGTCCACAGATGGAGTCCATGGAGAACCCCAACCTGGACCCCCCGAGGATGGCGCTGAACAATGAACGGCCCTTCATGCTGCTGCCACCGCTGATGGAGTGGATGCGTGTGGCCATCACGTACGCGGAGCACCGCCGCAGCCTCACCGTGGACAGTGGTGACATCCGGCAGGCGGCCCGGCTGCTGCTGCCCGGCCTGGACTGCGAGCCCCGGCAGCTCAAACCCGAATGCTGTTTCAGTTCCTTCCGGAGGCTGGATGCCCGAGCGGCTACTGAAAAATTCAACCAGGACCTGGGCTTCCGCATGCTCAACTGCGGAAGGACCGACCTCATCAGCCAGGCGATCGAAGCCCTGGGCCCCGACGGGGTGAACACCATGGATGACCAGGGTATGACGCCACTCATGTATGCCTGTGCTGCTGGGGATGAAGCCATGGTCCAGATGTTGATTGATGCTGGAGCCAACTTGGACATCCAGGTTCCAAGCAACTCTCCCAGGCACCCCTCCATCCACCCGGATAGCCGTCACTGGACCTCGCTGACGTTTGCTGTGCTGCATGGACATATCTCTGTGGTCCAGTTGCTCCTGGATGCTGGCGCCCACGTGGAGGGCTCTGCAGTGAACGGCGGCGAAGACAGCTATGCGGAGACGCCCCTGCAGCTGGCCTCTGCGGCCGGGAACTACGAGCTGGTCAGCTTGCTGCTTAGCCGGGGTGCCGACCCCCTCCTCAGCATGCTCGAAGCCAACGGCATGGCCTCCTCCCTCCACGAGGATATGAACTGCTTCAGCCACTCGGCCGCCCATGGCCACAGGAACGTCCTGAGGAAGCTCCTGACGCAGCCACAGCAGGCCAAAGCGGACGTGCTGTCCCTGGAGGAGATCCTGGCTGAGGGCGTGGAAGACAGTGATGCGTCCAGCCAGGGCAGCGGCAGCGAGGGGCCCATGCGACTGAGCCGGACACGCACCAAGGCCCTCCAGGAGGCCATGTACTACAGCGCAGAGCACGGCTACGTGGACATCACCATGGAGCTGAGGGCGCTGGGCGTCCCCTGGAAGCTGCATGTCTGGATCGAGTCTCTGAGGACGTCCTTCTCCCAGTCTCGGTACTCGGTGGTGCAGAGCCTCCTGCGGGATTTCAGCTCCATCAAGGAGGAGGAGTACAACGAGGAGCTGGTGACCGAGGGCTTGCCACTCATGTTTGACATCCTCAAGACCAGCAAGAACGACTCGGTCACACAGCAGCTAGCGGCCATCTTCATGCACTGCTATGGCAGCAGCCCCATCCCCCGCATCCCTGAGCTCCGCAAGACGCTGCCGGCCAGGCTCGATCCTCACTTTTTGAACAACAAGGAGATGTCAGATGTGACCTTCCTCGTGGAAGGAAAGCTGTTTTATGCACATAAAGTCCTGCTGGTGACGGCTTCTAACAGGTTCAAGACGCTGATGACCAATAAATCAGAGCAAGATGGCGATGGCAGCAAAACCATCGAGATCGGCGACATGAAGTACCACATTTTCCAGATGATGATGCAGTATCTGTACTACGGGGGAACGGAATCCATGGACATCCCCACCAGTGACATCCTCGAGCTATTGTCAGCTGCCAGCCTGTTCCAGCTGGACGCCCTGCAGCGGCATTGTGAGATCCTGTGCTCCCAGACCCTGAGCGTGGACAGCGCAGTGAACACCTACAAGTATGCCAAGATCCACAACGCCCCCGAACTGGCCCTGTTCTGCGAGGGCTTCTTCCTCAAGCACATGAAGGCCCTGCTGGAGCAGGACTCCTTCCGGCAGCTCATCTACGGCCGCAGCAGCAAAGTGCAGGGCCTGGACCCGCTGCAGGACCTGCAGAGCACCCTGGCCGAGCGCGTGCACTCGCTCTACGTCACCTCTCGGGTGTGACGTGTGGGGGCGGCTGGCTCTGTCCCTAGGCCTCCCGGCGGGAAGAAAGGCTGGGAGCTTCCTGGGGGTGTCTGGGTCAGCACAGAGCCAGCACCGGTGGACACGCTGGGGCCCTGCTGGGCTGAGACTGGTTACCGGCACTCTTGGAGCCAGACTCGGGCAGGCCCAGAGCCTAACCATTTGCTCGACCAGGGATGAGCCAAGGGCAGGTGTGGCCACAAGTGGCCCTTCCCCACACCTGCCGCCTGCTTGCACCGGAGGGCTGCCGTGCACTCCCTCGTGTGCCCCTCCCGGAGGCCCGCGCTGATCCCGCTCTGCTCTGCACAGCTTCTCGTCATGCCCTCCAGGCTCTAACCAGCCCACTCCCAGGGCCTTGGGCAGCTCAGACTGTCCTAAGTGGGGCTTCTGGGGGGTGTGGGCATTCTTAGGAATGTAGAGAGCGTATGTTCTATCTAGGCCCCAGGCCGTTTCAGTCAAAAGCTGGTGTTTGTTTTTCTCTCAGTGTCACGTCAGGCACTGAACTTAAGGCTGTGCCTTTGAAAGACCTGATGTGGCCTCCAGGGGGCCTGGGGATCCTGCGAAGAGGGTCATTTTCAGTCTATTTCCTTGGTGTCCAGGCTCCTTTGGGCAGAGGGACCGCCGGCCTGCTCAGTGAGTAGTAGAGAAGGCGGTTAGCTCCCCCCGCCAGCGCCTTCAAAGCTTTTGGTCTGAGCCAAGGGTGGCATGGGCAGCGTGGAGGAGCCTGGTGGCCTCCGCTTGTGTTGCTGCTGCTGTTTTCAGGGGCCAGTGTAAAGGGGATGATTCTGAAATCCCAAGCCTAGAATTAGGCAGAGCCCTAAACATCCCGCCAGTCCAGTCTCTCCAGTGAAAGAGTCCTTTAACTTGGACTAGAGAGCAGGGCCCAGACTTCCCATTGGGAACTGCGGGTCTTGGGGAACTTAAAGGTCGGGGCTTTGGTAGACGGGAAGGACTGGGAGAAGAGGTCCTTCTACTTCCCTGCTACCTGCCCCTGCCATCCTGTGGGCTCCAGGCTCTCCGGGGTGGGGACGCATCGCTGGGCCTGGACCCTCATCGTATTTATGTACCAGACATCCGAGGCGTCTTCCGGAACAGCTTGTGCCGGATGTCCCCTTTGGCTGTCTGGCCGTACCTTAGAAACTATTTATTCACCAGAAGCCCCAGGCACTTTAGGAGGTGTCCTTTCAGTCACCTTGAAAAACCCTGGGGGTTTACAACCCTGGAAAATATTTTCAACTAGCTGCTTGAGCTGGATGTACAAAGGAATAGGTGTTATTTTATTGCTGTAATATTGTATGATACTGTAACTATACATTAATGTTGTCACTTATTGTAAATGTACTATGGTTTTATTAACAATAAACACTTGTTAACAATGA EMBV3_08676 GTACTGCAAAGACACTCGGCAGCAGCATCAACAGGGAGAAGAATCTCAGAAGATGAGAGG Gene GeneID:512660|SEMA3C:NM_001101082:8_cdna Constitutive 0 NULL GeneID:512660 4 GENE SEMA3C NULL sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C EMBV3_21295 CAATGTCACGAACCTCCATCCATACTTCTTCAGGCACTCTGTCTATCACATCTAATCCCC Gene BVV0102_191700 + 0 NULL GK000022.2:2117441-2685119 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178770 TCONS_00176206 TCONS_00207434 TCONS_00099336 TCONS_00024384 TCONS_00115391 TCONS_00153088 TCONS_00156231 TCONS_00031651 TCONS_00031376 TCONS_00254205 TCONS_00177406 TCONS_00250193 TCONS_00236580 TCONS_00006998 TCONS_00175324 TCONS_00122251 17 XLOC_108543 XLOC_105985 XLOC_125950 XLOC_059579 XLOC_014494 XLOC_069561 XLOC_092853 XLOC_094948 XLOC_017898 XLOC_017624 XLOC_157139 XLOC_107180 XLOC_153136 XLOC_144512 XLOC_002560 XLOC_105106 XLOC_073806 Coding TCONS_00176206 XLOC_105985 NonCoding NonCoding - 3:23751047-23753068 - TSS130965 2021 2 TCONS_00176206_6 127 0.745670460168234 1 0 0.000744417501690787 0.00164226552420606 0.000546896373412403 0.000907388681562148 0.000327148249235958 0.000149265160201778 0.000748783212198839 0.000641712667513105 0.00106819894315074 8.37615977133915e-05 1.13270099942419e-06 2.52752188673999e-07 0.000130852084654744 3.10340961992609e-06 0.000112259372881575 0 0 0 0.000717621730820548 0.000714423551771007 3.0041817277982e-05 3.27836972174808e-06 0 0 0.000270688264116875 0.000486147581397276 0.000312792286601644 0 0 0 NM_174654.2 SLCO1A2 Bos taurus solute carrier organic anion transporter family, member 1A2 (SLCO1A2), mRNA. 0.0 664 89.88 0.243938644235527 0 noncoding ATATTTCTCCTGGCAATCTTGATTCCAGCTTGTGCTTCATCCAGCCTGGCATTTTGCATGATGTACTATGCATATAAGTTAAATAAGCAGGGTAACAATATACAGCCTTGATGTACTCCTTTCCTGATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGATCTGCATACCGATTTCTCAAGAGGCAGGTCAGGTGGTCTGGTATTCCCATGTCTCGAAGAATTTCCAGAGTTTGTTGTGATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCGGAAGTCAATGTTTTTCTGGAACTCTCTTGCTTTTTCTGGAGAAGGCAATGGCACCCCACTCCAGTTCTTTTGCCTGGAAACTCCCATGGATGGAGGAGCCTGGAAGGCTGCAGTCCGTGGGGTAGCTAAGAGTTGGGCACGAGTGAGTGACTTCACTTTCACTTTTCATGCATTGGAGGAGGAAATGGCAACCCACTTCAGTGTTCTTGCCTGGAGAATCCCAGAGATGGGGGAGTCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCAGACATGACTGAAGCGACTTAGCAGCAGCAACTTGCTTTGTTGATGATCCGACAGATGTTGGCAATTTGATCTCTGGTTCCTCTGCCTGTTCTAAATCCAGCTTGAACATCTGAAAGTTCATGGTTCACATATTGTTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGAATGTGAGATGAGTGCAATTGTGTGGTAGTTTGAGGATTCTTTGGCATTGCCTTTCTTTGGGGTTAGAATGAAAACTGACCTTTTCCAGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCATCTGTTAGGATTTGAAATAGCTCAACTGGAATTCCATCATGTCCACCAGCTTTGTTCATAGTGATGCTTCCTAAGGCCCACTTGACTTCACATTCCAGGATGTCTGGCTCTAGGTCAGTGATCATACCATCGTGATTATCTGGGTTGTGATGATCTTTTTTGTATAGTTCTTCTGTGTATTCTTTTCACAGCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTGCCCTTTATTGTGCCCATCTTTGCATGAAATGTTCCCTTGGTATCTCTGATTTTCTTGAAGAGGTCTCTAGACTTTCCCATTCTATTGTTTTTCACTATTTTTTGCATTGATCACCAAAGAAGGCTTTCTTATCTCTCCTTGCTATTCTTTGGAACTCTGCATTCAAATGAGTATATCTTTTCTTTTCTCATTTGCCTTTTGCTTCTCTTCTATTCACAGCTATTTGTTAGCCCTCCTCAGACAACCATTTTGCCTTTTTGCATTTCTTTTCCTTGGGGATGGTCTTGATCCCTGCCTCCTGTACAATGTCACAAACCTCCATCCATAGTTCTTCAGGCACTCTGTCTATCACATCTAGTCCCTTGAATCTATTTGTCATTTTAGCCCTCTGCAGTTTGCGGGGTCACCAAGAAAGGAGATGATGAATGCCCTACCCACAGCAGCTACATTTTAATAGAGCCATAGGAAGCAGAAACGCAGACCTGTCATCTCCTCCCCACTCTCCAAACACCATTTATAGCAGGCATGTGGTTCCAAACTGGAGACAGTTGGGAAAGAGTCGCCTGAGCTGGTCTGCTAATATAGTGCCTCCAGGTCTCTTGCGTAGGGAACTCTCTGTTAACAACAGGTTCCCTTTATCCACCACCTCCAGGAGAATCCACTTACTCATTTTTACTTTGGTGTTAACCTGGGGCTCCGGCTTAGCCCTGCCCACCTGTTCCTTTCTTCTCTACACTTTCTCAGCTGTTTATCAGTTCCAGGACACACTTGCGTTTTCAGATTTAAAAACAGACTCTCCTGCAGGATGAGGATTTGGGGTTGATGTAAGCAGTGAACAGATAGATAAGTTCCTGGTATTAAGCATGGGCACTGAATCTGGTCTGAGTCAC TCONS_00169161 . 5' 14260 TCONS_00169161 . 5' 14260 EMBV3_00221 TCCCTTCTTATCAACTGTATGGACCCTCGCATCTACCTGTAGGCTAGGGAGTCTTCCCAT Gene GeneID:511427|KRI1:NM_001110072:20_cdna Constitutive 0 NULL GeneID:511427 7 GENE KRI1 FLJ12949 KRI1 homolog (S. cerevisiae) EMBV3_16782 CCTCCCCGCAGTTGATATTTAAGTTTTGCCACATGCAGTTCCCGAATTTTCAATCCAGGG Gene GeneID:538964|CYP8B1:NM_001076139:175_cdna Constitutive 0 NULL GeneID:538964 22 GENE CYP8B1 NULL cytochrome P450, family 8, subfamily B, polypeptide 1 EMBV3_22254 TGGGTGGAAGGCTAGGGACTCAGGAAAATGTGATTCTAGTCTGAAGCTTGCTGTGTGACC Gene BVV0102_387941 + 1 EMBV3_25500 GK000017.2:72247005-72273493 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37557 GCTGCCACCCAGGACCAAAGCTGGAGAATGATCCAAAGTCCTAGCAAAATCAACACTTCC Gene GeneID:531619|TTC16:NM_001102138:151_cdna Constitutive 0 NULL GeneID:531619 11 GENE TTC16 MGC165720 tetratricopeptide repeat domain 16 EMBV3_39861 GCATGAAGTAGAATAAGGAGTCACAGTTCACCTAAACACCACCCCAAAAGTGTCTGGCAC Gene BVT0102_267755 - 1 EMBV3_23017 GK000028.2:9450921-9468534 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14671 TCTTGGACTTCGTGGAGCAGAAATGTGAAGGCCATTTTGCAACCTGTATTGGCAGCAGAA Variant GeneID:513777|CCDC104:NM_001034453:101_cdna 227^393 3 EMBV3_23841 GeneID:513777 11 GENE CCDC104 MGC128282 coiled-coil domain containing 104 EMBV3_26180 CAGCAGCAGCTTACCAACCTGCAGATGGCAGCTGCCGTGGCCGCAGCTGCAGCCACAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07737 TGTGACCATGGTTTCGTCGGAGGACATTGAGATCCTGGAGCATGCTGGCGAGCTAGTTAT Gene GeneID:515997|E4F1:XM_002697924:569_cdna Constitutive 1 NULL GeneID:515997 25 GENE E4F1 NULL E4F transcription factor 1 EMBV3_21895 CCAATATACAGTCTTGAGATGGCACATTCCTACAGTTGAGGAAGGGGTCTTGAGACCTCC Gene GeneID:526430|NCK2:NM_001099036:95_cdna UTR3_Alt 2 NULL GeneID:526430 11 GENE NCK2 MGC159894 NCK adaptor protein 2 EMBV3_10995 CTTGAAGGAAGTTAACAACAGGCGGTAGAATTCCCAGCAAAGGGCAGAGTCCTGGGTGGA Gene GeneID:512732|STMN4:NM_001075580:5_cdna Constitutive 0 NULL GeneID:512732 8 GENE STMN4 NULL stathmin-like 4 EMBV3_22680 AGCGCATGTGGGCAGCCATCCAGAGCTGGGACATCAACTCACGGAGAAACATCAATTACA Gene GeneID:540351|ZER1:XM_002691636:333_cdna Constitutive 0 NULL GeneID:540351 11 GENE ZER1 NULL zer-1 homolog (C. elegans) EMBV3_22932 ATTATCTAAATTCTTATACTAGGTATTTATTTTTCATGAAATGTTGATATATTTAATCAA Gene GeneID:506223|OMA1:NM_001035033:22_cdna Constitutive 1 NULL GeneID:506223 3 GENE OMA1 MGC127053 OMA1 homolog, zinc metallopeptidase (S. cerevisiae) EMBV3_23272 TACATTGCTGAGCCCTCTGCCTAGACCACAGATCACTGCCTCACTGGAGATTGTAGACCT Gene BVT0102_025059 + 0 NULL GK000007.2:5199377-5206110 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41436 CCCAACAGGTATGCATTTCAAGATAGTTGCATTGTGCTGCCCCAAAATTCTTCAGTTGGA Gene GeneID:100337493|LOC100337493:XM_002699911:182_cdna Constitutive 0 NULL GeneID:100337493 X GENE LOC100337493 NULL hypothetical protein LOC100337493 EMBV3_01759 CCCGCATCAGGGTCTTTTCCAATGAGTCTGCTTTTGCATCAGGTGACCAGAGTGTCAGAG Gene BVV0102_132906 + 0 NULL GK000004.2:25271427-25316892 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33486 TAGAAGTTTTACCACAGGAAGGCCAACTTGTTAAGGACAGTATCGTGGGGAGTACAGGCC Gene GeneID:100336537|LOC100336537:XR_084057:82_cdna Constitutive 0 NULL GeneID:100336537 24 PSEUDO LOC100336537 NULL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1-like EMBV3_41619 AGATCTCCAACCCTTATGAACAGCAGCCACCTGGCAAAGAGCTCAACAAGTACGCCTCCT Gene GeneID:100139490|LOC100139490:NM_001145203:271_cdna Constitutive 0 NULL GeneID:100139490 25 GENE LOC100139490 NULL hypothetical protein LOC100139490 EMBV3_04538 AGTGCCCTGGCTTTTGCTGGGCTCTCTCCTCACCTCCTTCATTGTCACCCTACTGTTTTT Gene GeneID:785715|BOTA-T2R41:XM_002687122:469_cdna Constitutive 0 NULL GeneID:785715 4 GENE BOTA-T2R41 NULL bitter taste receptor T2R41 EMBV3_38430 CCAGCCATGACAAGAGAACTGGTGAGTTGTAAAGTGCCGTCAGAATTGATTTCCCTCTTT Gene GeneID:504577|ARMCX1:NM_001075167:5_cdna Constitutive 0 NULL GeneID:504577 X GENE ARMCX1 MGC139654 armadillo repeat containing, X-linked 1 EMBV3_23844 CGTCTACCTCCAGGACAGCCTTCTGAGTGTCCGCTCGCAGGATGACAGTCTTCTGGCCTT Gene GeneID:618019|LOC618019:XM_002685800:693_cdna Constitutive 0 NULL GeneID:618019 2 GENE LOC618019 NULL similar to Family with sequence similarity 131, member C EMBV3_12560 GAGATGTCCCAAACAGATGGGGTGAACCTAGCAATTCAGTTCCTCATAGCCGTCTCAGTG Gene GeneID:516030|DLX4:NM_001098041:106_cdna Constitutive 0 NULL GeneID:516030 19 GENE DLX4 MGC149037 distal-less homeobox 4 EMBV3_23767 CCGCAGTGTAAAGGACACGGATTTATCAAGAAACATTCCTGGCAAAGTTAAAGTGTCTGC Gene GeneID:541292|SDCCAG1:XM_002690885:323_cdna Constitutive 0 NULL GeneID:541292 10 GENE SDCCAG1 NULL serologically defined colon cancer antigen 1 EMBV3_43454 CCATCGTCAATGGACGTTATGCTGATGGAGAGAGCTTCCTGGGTTTTGTCGACAAGCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15255 AGCCAGAAGCCTTAGAAACTTGCCCTTACAACCCTCACCACCGAATCCCACTCAGCAGAT Gene GeneID:524670|GTSF1L:NM_001079601:1147_cdna Constitutive 0 NULL GeneID:524670 13 GENE GTSF1L FAM112A gametocyte specific factor 1-like EMBV3_33458 AGGAAGCGGTTTTAGGTCCCTTTTCCAGAAGACAAAACTGTGGCTGAGACAGGTCAAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08046 ATACACTTTATTTTGTAGCTGAAAATGATGGGAAATCAACCTGTCTTTGAGGATATGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32044 CTGGAGCGGCTGCTGGCGTGGAAACTAGCGCGGTACTGGCTGCTGGAGCTCCTGAGGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35102 ATCGAACCCTTGTCCCTAGCAGTGAATGCACCAAATCCTAATTGCTGGACCACCAGGGAA Gene BVT0102_421803 + 0 NULL GK000007.2:16158002-16204471 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15760 CGGTGGTGACTCCCATGTTGAACCCCATCATCTACAGCTTGAGGAATAGTGAAGTAAAGG Gene GeneID:617571|LOC617571:XM_002693135:28_cdna Constitutive 0 NULL GeneID:617571 15 GENE LOC617571 NULL similar to olfactory receptor Olfr17 EMBV3_01879 CTTGGCCATGATCTTCTAGGACTCACCATCCCCAGAATGAAAACAGTTTCTGCAGTAGGA Gene GeneID:507864|C10H15orf23:NM_001038055:127_cdna Constitutive 0 NULL GeneID:507864 10 GENE C10H15orf23 MGC134039 chromosome 15 open reading frame 23 ortholog EMBV3_22741 GGCTTTGGAAGCTACAGTTGACCTGACTGTCTCTTTGCATTGTAGAGATTGAGTTCAAGG Gene BVT0102_240992 + 0 NULL GK000012.2:48123390-48831951 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036978 TCONS_00036980 TCONS_00036977 TCONS_00036984 TCONS_00036979 TCONS_00036983 TCONS_00036975 TCONS_00036974 TCONS_00036982 TCONS_00036981 TCONS_00036976 1 XLOC_021270 Coding TCONS_00036981 XLOC_021270 Coding Coding KLF12 12:48825937-49290907 j TSS26791 8062 1 TCONS_00036981_6 402 11 0.982684867163187 0.000155186065372286 0.00138511970062836 6.40517318745806e-10 0.000704550536559036 0.000881910057639487 2.50307941916696e-09 2.92892336585499e-07 1.1729492493766e-06 0.00112010728884707 1.48679267033353e-08 2.90941023875407e-05 3.49736248493872e-09 9.35397706891158e-06 6.56768257348278e-07 8.9778626215689e-08 6.16591203711558e-16 2.07436492675364e-20 5.66501576328942e-22 2.82000775055224e-15 0.000401076081783981 0.000165563781007602 2.90686692458831e-18 1.93546673378411e-108 8.07021295968034e-07 0.000220420395040625 0.000444630807728291 0.000440299064584719 1.53032271798161e-18 7.48107953771058e-14 4.52451365241456e-19 XM_005213835.1 KLF12 PREDICTED: Bos taurus Kruppel-like factor 12 (KLF12), transcript 0.0 1.085e+04 100.00 0.745844703547507 NM_007249.4 KLF12 Homo sapiens Kruppel-like factor 12 (KLF12), mRNA. 0.0 7934 83.87 0.922847928553709 TCONS_00036981_6 sp|Q9Y4X4|KLF12_HUMAN KLF12_HUMAN Krueppel-like factor 12; 0.0 813 99.00 0.997512437810945 3 coding 0 0 0 0 0.0375058337395575 0.842493575881855 0.0453305597267942 0.381071080451768 AAGCATTTCCTTAAGCAATGCTGAGCAGGATCTGGAACTTCCTATTCCTCAAAAAAGTCTCAGAAAGGTTTGCGGAAGTGCAGAGGTCAACATGACTGCCTATAATACGTCTCCTCTACACCCAATCTGTGGATTTCATCCAGCACCCACACTACATTTTGGGGTCATACCTGTTTGCCCTCTCGTGGCTATGTTTGCCAAAAAGGCATACAATGAAATATGATCTGCTAAAGACTGTTGTATATTGTTTCTGACAATAAGAATAGATGCAAAATTCCTTACAAGATTATTGCCTCTCTCAGACTGCCTGCTGGGCCAGAAGCTATTGTGAAAAAAACTTTTGTAAAGAAAGCATCCAGGTGACACTCCCTAAACCTTGAGAAAAGCACCGCCACCTCCTCGAGTTGAGAAACCTCGGCCTGTCTTGGGAACATCGGGTCCCTGTTGGGCGTGGAATGCAGGATCAATGTGACTCTAGAAACAAATGGATGAATGAATATCCATATGAAGAGGAAAACAATAAAGAATATCAATACCTTCGAGAACAGAATGTTAATGCTTGATGGGATGCCGGCAGTCAGAGTCAAAACAGAGCTTTTGGAATCTGAGCAAGGGTCTCCAAACGTCCACAAGTACCCCGATATGGAAGCTGTTCCCCTGTTGCTAAATAATGTGAAAGGGGAACCCCCGGAGGACTCATTATCTGTAGATCACTTCCAGACACAAACTGAGCCAGTGGACTTGTCCATCAACAAAGCCAGGACATCCCCTACAGCCGTTTCATCCTCCCCAGTTTCCATGACAGCGTCCGCCTCCTCACCTTCCTCAACTTCAACCTCCTCATCGTCTTCTAGCCGTCCAGCCTCATCCCCGACTGTTATAACATCAGTATCTTCAGCATCATCTTCGTCAACAGTATTAACTCCAGGGCCCCTCGTTGCCTCTGCCTCTGGTGTGGGAGGCCAGCAGTTTTTGCACATTATCCATCCTGTTCCGCCTTCAAGTCCCATGAATTTACAGTCTAACAAACTGAGTCACGTTCACCGCATCCCCGTGGTGGTCCAGTCGGTGCCTGTTGTCTACACAGCTGTGCGGTCACCTGGCAATGTGAACAACACTATCGTAGTACCACTTTTGGAGGATGGGAGAAGCCATGGCAAAGCACAAATGGACCCCCGAGGCCTATCTCCCAGACAAAGTAAAAGTGACAGTGATGATGATGACCTGCCAAATGTGACCTTAGATAGCGTTAATGAAACTGGATCTACGGCCCTTTCCATAGCCAGAGCAGTACAAGAGGTACATCCGTCCCCAGTATCAAGGGTCCGAGGAAATCGAATGAATAATCAGAAGTTTGCTTGTTCAATCTCACCATTTAGTATTGAGAGCACAAGACGCCAGAGAAGGTCTGAATCCCCAGACTCGAGAAAACGGCGTATCCACAGATGCGATTTCGAGGGCTGCAACAAAGTGTATACAAAAAGTTCTCACCTGAAGGCTCATCGAAGGACACATACAGGAGAGAAACCCTACAAGTGTACCTGGGAAGGCTGCACCTGGAAGTTCGCGCGCTCGGATGAACTGACGAGGCATTACCGCAAACACACGGGAGTGAAGCCATTCAAGTGCGCAGACTGTGACCGCAGCTTCTCCCGGTCAGACCACTTGGCACTGCACCGCCGGAGGCATATGCTGGTGTGAGGAAGGCTGCTTGTCCAGCTGAGTGTAAGAGCTGGATCTCTTAGCGGCACCCCATTCAGCAGGGCTGGATCCCCTTCACAGTGTTAACACAAAAGGGCATCACCATCCCACGATGTCTGAAAGCAGAGCAGGAAAAAGAAGTGGTAACACTTCTCCTTTCGGTCTGAAGGTAACCCCCCCGTCACGACTACACAAGAAACGACTTCACGCTGGCCTGGGAGATCGGTGACACAGATGCTGAAGAGACAGGCATTGTTTTCCGTGCTGTGTCCTCTGCCATTTCAAGATGTTTGTAGTTTGTACATTTTCTGAGCTGTCAGACGTTTTGTTATTGATACTTTTAAAGGTCGTCTACCACAAATTGATGGCTAGAGCAAGACCTTGTAAATTTGGATTATTCTCCCATCATCCCACCCCTGATCCCCTTTTTACAAGTAAGATATTAATAGAACCCACATCCAATCTGTTACCAGCAAGCAGCCTGAAAGTAGAAAAGAAGAAACTGTTGGAGAGGTTCCATTACCTGAAAAGAAAGGAGCGCTCAGGCAGCCCTTTTGCAATAGTGATGGTGACCACTAGATATCACTGCGACTTGTCATCATGCCATGCCCTGGAGAAAACCAACATTGATTCTTTTCATCTGTTTGTTGTTGATTGTTTTTGTTTTGTTCTGCTTCTGTTTTGTTCATCTGTTTGAGCAGAGGGGCAGCGACATTTCAGTTGGAGTCTAGTCCTGGTGTCTGCCCTGGCGTGGACGGGCACAGAGTCGTTCTGTAGTTGAATAGGAAGAGCCTGTCTAAAAAAACTACTGCCCCACTTCAAATTGCAGTGTTCTGTCAGCTAGGCATCATCTCTTCCTGCCCCTAGTATTTGATTACAAGGAATCGGGGGGAAAAAAACTCTCTTAGACACACTGGCACCAAGGTACGAGGTGGGGCGGCCCGGGCAAAGTCAGTGAACATGAAAAAATCAGACAAAGCAGAGGTGGAAATAATGCGCCTCTTGAGGAGAAAAGCAATAACGAATAAAAGGACTTTCCTACAGTCACTTCACTGAGGACTCACGTTACCAATTTTCATACTTACTAAAGGGATTGTAAAAACACCCCAGCATTTTAGAGGTCTTGGCTACATTTACAGCACTGAGGTAATCTTTCTGCTGTTTGTTGTCCTGCTTGGTTGAGTACCACAATTAAAGATTATGCTCCCCCTTTTCTTGTTTGAAAACAGTCATTTGGTGACTCGAGAGGCCACGGAGGCATAGCTGGGAATTAACTGTTGGGTGAATGGGTCAGTTCTCCTTGGAACTGAGTCAGTGGGAAGGGAATGCTCCCCAAGGAAAGCCTGACATGGTGCTCGTTTCCGCCCTTGGAGAGCCAAGGATAAATGACTCTCCAATAGGTTCTTCTCTCTAGATTTCATTTTCTAAACTATATTAGGACCCAATACAACGGCATCTGCAGGGATGAACTCACTCATCCTGTGCTGAGGGTGAGAGGAAATTATAGTCCCGTAAACCCCTTGAGTTATGAGCCTTTTTTGCAACTAGCGAAGTCTATAGTAAACAAAGCAATACATCACCAATGAGCATTCTTTCAGAAAAATTACCATATTTTTTCCCCCACTAAAAGCTGAATTTTTTCAGCTTTCTGTAGCCAAGGGGCTTGGTAAGGTTTTATTGTCATTGCTGTTATTGTTAAGATTTTTTTTATAGCTTAGATATAAGAAGTTGCCAGCATAGACCTTTGCATTATATTTTAATTACAAACACTTGATTTGGGAAATTGCACAAATTATCCTCACAATATTACTAGCTCATTTTTAAAGATTTGAACATTCTGAAATAATTTCTGGTTCTAGAAATATCCTCTTTAGGATTATCTTCTAATTCAGATAATCTTAATTCTGATGAAGCAAAAAACTAGAAACATTGGAACAAGGATAACTTGTGTTGGATGGCATTAAAAGGAATGTTTTTAATGTTCAAGCAAGAGCATAATGATTTTCAGGTCAAATTCTGTCTTCAAAAATACATGCTCTATATTTTCTGCCAGGTCTGAAAAATTCATCAGGCAATTTCCCTCCAACAAGGGCTGCAGTTCTATGGATAAATAGCTTCTGTAGCTACACAGTGTACTGCCCACGAAGCACTGGGTTTATGGCTTTTTGTTTTTTTTCTTTTACACCAACTGGAAAGTTTTACCTGTACTGTAAGCAACTCATGCATTTCATTGCCTGTGACCATTTTAAATAGAAAGGCCAGTGTTGGTTACTGGTCAGTGGCAAAGAACACAGAGCATGGTGAACACAGCTGTGAAGCCCTCTACTAGTCCTAGAATTTAGTTGACAGGTAATAGGTGAATCACTTAGGTGAACGGCAGACGATTTAATTCTGCTTTCTCTCATAAGAAGGGCCAGTCCTTTTCTCTGCTGAGAGATCCTGAGAGTGTTACAGGTAGAAATGGTTTTTAGAATTCATAGAACTGACAGGCAGTAGGAGCTTCCTCAGTGACAGCTTGATTTAAATTTAGCACAGAATGAGATGAGCTGCTCCCCTCTAATAGCATAGGAAAAATTAAGGGACGTGAGCTTGTCTGCTTGCCTTCTGAAGGTGGGAACCCAACTGAGACAATAAGTTTACTGATAAAACCTGTCAGCATTATGCCATTTCCCCCTTTTGGTGTATTGATACTTCTAAGGAGGGAATCCAAGCACAAGTAGTGAATGAGTTGCTGATCTGGTCCCAGACTGAAACTTACCTGAGGCTTGTCTTGAAGCATAGCAAATAATCCTTGGTGAATTTTCTACACGTGTTTCCCCATAGAAAGGAAGGTGGTTTGGAAGAGAAGGAATTACATTTTTAAGGAAGAATATCTTCAGGCACGGAAAAGCCTCCTGCGTCTCATCTGATGTCTGTTCTAGCCTGTTTTAAAAAGCACAGTAGATGATTAACAGCAAAAAAGGAGTAAAATCCAAAGAATTTCTCAGTTGTACCCTAACGGGATGCATTCTTTGGTGTTAAATTTGAAGTCATTCAGTTTGCAGCTGGGCATATGTGTATGTTTGGGAATTTAGACACAGGTAGCTATAATGGCTTTAGAAGCTACAGTTGACCTGACTGTCTCTTTGCATTGTAGAGATTGAGTTCAAGGAAGTTAATGTTATTTGAAAAGTTAAGAAGTTCAGACATTGAAGTTTTAATAGATCCCCTCCTCATATTCTGATCTTAGATTGTTTGTGTAAAGATTCACACTTCCCCATCTTAGTTTCAGCCCCATCCCATCAACTGCATGTGGACTTTGAGAAGCCTGCTTGATAACTTGTCTTAAGTTTTATTAAGGCATTTAGAGTAAAATTTCTAATGGCTTTACCATAAAATTACACTGTTGCCTGAAATTACTTTTATGGAACACTATGGGACATTTATTTTCAAAGGCAGTTGAATAACAGTAACACAAACCACATTTTTTATTGCAAAAAAAAAAAAAGAGCACTTTTTGTTCACTTTAAAGTTTAAGTGGAAAATAGAGGAACTTCAGGTGAAAAAAACTTGCAAAATACTACAGTGTTTACAGATGCCAGTTCTAGATGATTAAAAAGGCCATTCTCATTATGGTTGAAATTTGGATCAGCTTCTACAAAGATTTGTATTCATTTTTATGCAATTGTTTTAACTTCAAATTGCTATTTGTGTTTTCAACATAAATACAATTCTGCACTTTGAAATCAGTTCATTAAAGTGATAACATATATATGGATAAAGATGCAGTATTCCTTACTCTGTACTTTATTTATTATACTTACCAAAGTTGCAATTGAGTAAATCTGGTGAGGTGAGGCCTTCAAATGTATTAATACGCCTTTGTTATATTGTTATGACTGCTTAGAAGTGTAGCCATGATGTTGTTAATAAAGGTGTCTTAATGTTTATAGTGAGGAATGACAGAATTTCAGCAGTGTTAAGAATACCAGCGTTCGTGATATGTTGAGTTACAGTCTTTGTAAAGGATTGAGCGTGAGATAACTCATGTGAATCTTAGTAGGCCCAGGAAGCCTTAATATTCATAGTCCATAATCCAATCTCAGATTTTACTCCTTACTGTTTAAGCGTGTAAATTTAGGAGGTAAATGTATTCTACAATTTCATTGATCATATCTCTTCCTTCAACTTTTCTGAGGTAGTGCATTTCACACACACACAAGATGTTTCCATTTGATTTGGTTTGGTTTAGAAAAGGGGTTTGGTAAGCCATGTCTTCCATATCACATTTCTCCATATCCCCACAATGCCTTCCACTTACGTGTACTGGCAGCCCCAACACATGCACACCTGTATACACACTTGGATATGCAGCAGCCAGTGGACTAATAAATATCAGCAAAGAACTTTTTTAAAAAGAATGAATTTGTAATAATCCATGCTGTCTAGAAATGTAAGTTATTTACCTTATTAGGGAATCAGCTTATAATGCTATATATGACTTTGCCTGCATTTTATAGTTAAGAAGTGTACATAAAAATTTTAAATGCTATATTTTCACAGTTTCATTATAGAATAATATCTGTTTAGCAATCCATGTCCATTGGTACTTTAAATATGCTAAATACTGTGCAATTGCAATAGAAATTCAGATTTTCATAAGAAAATGAAATAGGATACTGCATCTTAAAAAAATAGAGTGAAGATATTTTACTGTATTAGTAACATATGTGATAGTGGAAAAAAGTATTTTCAAACTCACAAATTTTACAGAGGTTGTAAATAGTTTGATGAAGTATGTTGGGAAAAAGAGCTTCTAGTTTTCATCACAATAAAAAAGAAAAAAAACTTGTTCAGATATGCCTTGTGTATCTTACACACAATTAGTGATATTGCCGTGGGGACTCTGTTCTGCCTTGTCAGGGCATAGCCCTTGTGCTCCCTAACAAAATGGAGTGGCCACTTGTCTCAGTTTAGCCAGGATGGTTTAGAATGCAGTGAAGTCATTTTAAGTTGCAGCACAGTGATTCCAGATGCATGCTCTTTGCCTGTAAAGAGGAAAACAGCAGCACAGGATTTCCTTGTGTTAAAAAAGCATCTAGCAGTTGTTTTTTTTTCTCAGTTACCTTCCTCCTCGATGCAGTAATTCTTGATCAAAACAAATGCACACCCTCTGCAGGTGTTTCTGTTTGTTAAATCCCAGAGAGAGTACTTTTAGCAGTAGCTACCTGTTGACAAGATGAATTCTATGAATATGGCCACATGTGAAATGATTCTATACTGGCAATAGGAATAAACTAATGCCCATTTTCAGAAATGAATTAAAAGCTGAAAGTGCCTGTCAATAAATTTTATGACCAATGAGATATTCCTGTACTTTTACACAGCAATAATTCTTTTTCAACCTGGGTTTTTCCCCCACCTTTGGGAAACACGCACACAGAGAAAATATATGCACACAATAAATTGAATCTGTTCATATACGCCCTCAAAAATTGTTTGGTGTGTTCTAAATATATTTCATCTTGCTTATGTTAGCATTTCTTAATTTAATCTTTCTTACAGAGTATACGAACACCTGTCTAAACTTATTATCTACAGTATACATCCTGGCACGTGACATTTATAATTTTGAGATGAAAACTTCACTGTGATTTGTCCGAAACTTAAGAAGCACTTCTTTGTAGTCCAAAAAGTTTTGCTCAGTTAACAAAAGCCAGTTTATTAAGAGCAAAACACTATAGACATTTGTTCCTTTTCCTTTATTTTATCCACTAATACCAAATGCACAAACCTATACCTTTCTTCATTTCCCTTCCCCCTAATATTTCCTGTTGTCATCTAAGAACCATTTTGGAGTGAATATTAACACAGTTGTTTCTCCCCAAATGTCCACTGAAGTAAAACTGACATGTAGTAAGCCTAGCCTTGACCGAGGTTTACAGTTAGTCCTGGAAATGACCAGATTTACATTCAGAACATCACAATGTGTTCCTACCATTATTTTACTGCTAAATGTAAAGTCGTGAATAGGACTATACAGCATATTATATGAAGAGACAAGAGCCCTGGAAATTCTCCAGTCCCATCATTTCAGAGCACAAATCCATCCAAACAAGCTATCAAGGGGTATCAGTAAAATTATACTCTTTCAGAGCCAAACATTTGGTAAGAGCAATTTTTAAAGTATAACTGTGATTAAACACTCAGGCTTTAGACAGTGAAGACTACCATGATGGACAGTGTTCTCCGGAACCAGACCACAGGATTATTAAACCATCTCCTGTTTCCCCCTCTACGTTTCAGAACAAAAAACAAAGAAGTATGCTAGATGAGGGTATAAAGTAATGATCAAAGTGTCAGAGTAACACTGCTGCGTTCT EMBV3_40873 GCTTAAGCTATCGGACTGGTTCAACCCATTATACATTGAGCATTACTTGGAGGAGTTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03128 CAGACGCTGGATGTATTTGAGGCTGCAGAGCTGTACCAGAAGGAAGGTATCCCACTGATT Gene GeneID:539404|IREB2:XM_002696666:286_cdna UTR3_Alt 2 NULL GeneID:539404 21 GENE IREB2 NULL iron-responsive element binding protein 2 EMBV3_24402 CGACCCCATTGTGCTGTGTCACCTGTACATGACTGACTTTTGTGCTGTGGTTTGGGTTGT Gene GeneID:504559|DIRAS3:NM_001034215:25_cdna Constitutive 0 NULL GeneID:504559 3 GENE DIRAS3 MGC128434 DIRAS family, GTP-binding RAS-like 3 EMBV3_03044 GGTTTAAAGTAAGTACCTGGCAGTCCAGTGGATAAGACTCTGCTCTTGCACTGCAAAGGG Gene BVT0102_207450 + 0 NULL GK000007.2:74114660-74119657 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25046 TGTGGGAAGAGCTTTAGTCAGCACGCGGGTCTTAGTTCTCACCAGAGACTCCATACTGGA Gene GeneID:527103|ZSCAN21:NM_001035368:236_cdna Constitutive 0 NULL GeneID:527103 25 GENE ZSCAN21 MGC128169 ZNF38 zinc finger and SCAN domain containing 21 EMBV3_09964 TGGCAACATCCAGATATTTCACATCAATGCCAAACACCTCCATTTAGATGGTCATTGTCC Gene BVT0102_018038 + 0 NULL GK000018.2:60892773-60898285 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084625 TCONS_00087418 TCONS_00084631 TCONS_00084624 TCONS_00087434 TCONS_00084626 TCONS_00087431 TCONS_00087417 TCONS_00084630 5 XLOC_051629 XLOC_052475 XLOC_052483 XLOC_052474 XLOC_051631 Coding TCONS_00084630 XLOC_051631 NonCoding NonCoding LOC100336431 18:60897313-60898185 x TSS63367 872 3 TCONS_00084630_1 44 1 0 0.000460036907515075 0.000498177417621089 0.000473723703073753 0.000518003961385719 0.000583288889527039 0.00022345205015002 0.000661929430312088 0.000802356775900924 0.00072502430824822 0.000518065327690512 0.000282682266634735 0.000544673131499757 6.30123484608395e-05 0.000772127703941077 0.000146192098152259 0.00856446560416386 0.00788503325541408 0.00356157584096748 0.000171133569345363 0.000164437681344556 1.66524264438164e-05 0.00240228405809545 0.0034880202971017 0.00626683978788609 0.000176048871202418 0.000154281471445536 9.93276439657461e-05 0.000543320333391588 0.000656628344150914 0.00069850569893426 XM_005192788.1 LOC101909868 PREDICTED: Bos taurus zinc finger protein 160-like (LOC101909868), 0.0 1573 100.00 0.998853211009174 0 noncoding ATAGTTGAAATAAAACCTTTTAGAATCCACGGCATGATCCATGATTAAGCACAGATCAAAAGTACAGAGAAAGATATTCATTTCTCTGTTATAATGATGTGAGACTTGTGATTTTTATGGCTTACCAAACAAAGGCTAGGAAGCACTTAGCAAGCATGGTATACACTAACTCCATGCCTTTTCAAGGAAGAGTTTCAAATAAACTTCGAGGTTATCACAAAAGCTGTGTTTATTTTAACAGTGTCAAGTAGTAATCATGACCTGTGTTGATATTATAAAGATACATCAATATTGCAGTGAACTGTCATTGTGTTCTTCTTAAAATCAAGGATATTACTATTGAAACCTTACAACCGACTTCTGCTTACTTTACAACATGGAAAGATTCAATGATCACTACATCATGGCAACATCCAGATATTCCACATCAATGCCAAACACGTCCATTTAGATGGTCATTGTCCATTTTACAGTACGGTATCCTTCATCTTCTAATGGAGGATAGATAGAAATGGTTGCAACACAATATAAAAGGCTAATCTTTAATAAACCATCAAAAATCTGTCTGCAAACACACTAGAAACAAAGCATAGTATGGATGATTTGAGGGCTTAATAACATTCACTTCAAATAATCTCAAATCACGTCATTATTAACAAGCATACATACATTACTAAGAATTGTAACTTTCTCACCATCAACCTTCTTCTCACGATTTATGCTAATATATCCACTTTCTATGTGTTGTAACTATGGAGTACTCCCTACAGTCATTCTCCTTCAGAGAAACTTCAGAAAAGAGGACTGATGAAATGCCTTCTAGTATGCAATCTCTGATATTTATTTCGATTTAACTTTTGATTAAATACCTT TCONS_00087432 r 3' 238 TCONS_00087432 r 3' 1109 EMBV3_20301 ATGAGTGATCTCCAAACCCGCTTCGAAACCGCCGTCGCTAACTCCAAGAACCTGAGCGAG Gene GeneID:100300155|LOC100300155:XM_002683897:2_cdna Constitutive 0 NULL GeneID:100300155 Un GENE LOC100300155 NULL similar to Enoyl-CoA Hydratase family member EMBV3_39204 CATCCGAAAACTCCCTAAGTACAACAATTGGCCGAACCATGTACGTGATTCCGTTCAGCA Variant GeneID:282856|PCK2:XM_002690499:463_cdna 390^574 1 EMBV3_42886 GeneID:282856 10 GENE PCK2 NULL phosphoenolpyruvate carboxykinase 2 (mitochondrial) EMBV3_18388 CAGTATGCACAGCAGCAGGACATGTTCTTTTTGGTCTGACTTCTTTCACTCAGCTTGGTG Gene BVT0102_115905 + 0 NULL GK000024.2:41687044-41856023 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01354 GATGACTGCAATGCGTTAGAATACCCAGTCCTAGTAACCACAGTCCTCCCGGATCATCAG Gene GeneID:505170|CYTL1:XM_002688425:55_cdna Constitutive 0 NULL GeneID:505170 6 GENE CYTL1 NULL cytokine-like 1 EMBV3_40047 CACTGGCATCAGTCATTTGCAGAACTAGCCAGAACTCTTTCTCTCCCTGTTTCCATGCCC Gene BVT0102_089134 + 0 NULL GK000030.2:110195009-110261036 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245456 TCONS_00245463 TCONS_00245459 1 XLOC_150733 NonCoding TCONS_00245456 XLOC_150733 NonCoding NonCoding - X:110189989-110200726 - TSS184252 3213 1 TCONS_00245456_4 123 0.377840024898848 3 0.701005961251863 0.000359042330041269 0.000256042357934828 0.000278543258551168 0.00052916131388202 0.000393741489391495 0.000477118868580605 0.000327312340695026 0.000178957858780025 0.00145181398234413 2.64564485408873e-10 0 3.64578940775358e-11 0.000179282807137198 0.00110985744613488 0.000100803692726832 0 0 0 0.000456320293112236 0.000699278644032702 0.000153628785120913 0 0 2.696511497646e-05 0.000404137281143196 0.000191507987674798 0.00027102242941152 0 0 2.07101069814963e-10 0 noncoding 0 0 0 0 -0.187290725973744 0.16903320934937 0.00665207958011822 0.91526602693651 GAGGGGAGTGGAGAGGAGTGTGGGTGCAGGTGGAAAAAAAGATTAGGGACAGATTGGCAATGTTTCTCTTATAAACGAAGATCTTGCAGAGTGATTTTCTACTCTGGTTGCTTATTTGCATCACCTGGAGAACTTAAACACTAACAACAAAGCCTTCACTGCCTGTGCCCAATCCCAGGTAGCCTGAATCATTTGATTTGGAGTGAGGGCGTGGCAGTTTTCAAAGTTTTCCAGGTGGTCTTAATGGGAATCAAGAGCTCAAACCACAACATGCTCAAACCCACCCTCAGAAAGGTGCTTTCACCTCCACTTTCACGGTCCCTGGGTGGCACAAGAAAAGGATACGGAAGACGTCAAACCCAGAGTTCCCACCTGAACACCACAAATGACTTTTACCCTGGGATTCAGAAATGTCTACAGGACAGAGACTGGATCAGCTAAAGAATGACAGCCGGATGTCTCAAAACATGGGGTAGAAACATAAGAGACTCAGACAACTTCCCCAAGCAACACACGCTAAAAAGAAGGAAAAGGCCCATGCCACTTTGTAACAGGACTACATCTGTGAAACCGTTCTGGCAGGTCTAAGTAATAGCTAGAAAGACCAGATTTGTAAATACAAGTGCCATCTCCCTTCTCACTGGGAACTTCCTGAGAGTATTGGGATAAATTTGAGAGGGGTTGAAGTGCTTCAGTTTTTGTGTTTGTTTGTTTTGGTCTTGGCAACGCATTCAACGTATATTTATAAGATTGCTAATTGCCAAATTCATTATTGGAATAGTGAAAGATGGAGAACAATACGAATATTCACCTGTACTGTTTTGCCGTTTAGTCATGCATTCTATACAATTTTGAAACATCTGCTATTTGCCAGGTGCTTGTCTAAGCATTAGACATTCAGTGACCAAACCAGGCTCCTGTCCTCAGGGAGCTTATACTCTACTAAGGAAAATGAACAATAACATGAATTTTAGCATATCCATCCTATAGAATGCTATGATATGGTTTTTATATATTATGTATATTTAACTGTATTAAAACAAAAGGTTCATCAAAATATAATACATAATATCTAATCTTTTACTTACAAAGGCAAGTTATAGAAGAGAATTGTAACCTGTGACTATAATAATAAAATGTATTAGAGTTCATAGGAAAAACTCAAGATGAAATATACATGATAAATCTTTGAATGCTATTAGGATGGAATTTTACCCCTGAAAATGCTTGATTGATTTTTTTACAAGCAGTATTAAACATTTATAATAAAAAAATTAGTTAGTAAAATGAAACACTGTGTACAGAGGCTAAACCTTAGAAATGCTGTTTGTAACATTGCCATTGGGATTTTATGTTTATCCTGTGGCTATTGGACATAGGGAAATGCAGCTAAAGCTTTTGCATACAATGGTGTTTTTTGGATACAAAAATTATAATCATAACTTCAGAATATTTCCTTTACACCTCAACCAAATGGGAATGCAATGTGAAGGAAATAATTTTGGAGGTAAACTATGTGATGATAGCTCCACATGGACAGAACTCTGGTGTTCATCCTGTCTCGAAGACATAAATCTACCCTTGGAGGGACAGAGCAGAGCTACTCTGAGCCATTCTCTTTTATGTATCATTTGTTTATTGCTGAGCTCGAGAAGGATACATCCCTTCTTAAATGGCTTTCTTAGAAATTAAATATCATTGTCCATTGGGTTCAAAAACTATCCCATTGATGGCTTTGCTTTCCACGTTTATGTTGTATTTCCAAAGAAATAATCTAAATATCCAGCAATGGGGGATTTGTTAAATGAATGATATTATTGTACAGTCACTTTTCACTTGAGTCTCAGCTATACTTTTGATGCTCTTCTCTGTATCACAGGTGGTTAGAAACCAGTAAACTCCATTTTGCAGGGTCCCTTTCAGCTTGCATCCCGTTAGGCTTGCTACTGGGAGGCACTGGTGGGGAGACTATAAGGTGGAAAAGAGAATAGCCTTTTAGTTTGTCTCAAGGGGTCCTCTAGAGGCAGCAACAATGATTACAGGCAACTATGTGTTCCCAAAACATCTGTGGCACTTTTAACAGATTCATAAGGTTTTAGACTCCAAGGTTTCTACTCCGTGATAGCAGTACCTCCAGATGAGGCAGCAGCAGTACCTCTCACAGATCAATATTAAGTGCCACAAGCGCCATCACCCACGTATGGGCTCCAGCCCCAGGCTGCGTTTCAGGTTTCAGGTGGCAGCCTTCAGGTTTCCTAGGTAAGACACACTGGCATCAGTCATTTGCAGAACTAGCCAGAACTCTTTCTCTCCCTGTTTCCATGCCCTTGTGCAATGCAAATTTGCAACTTTCCACATAAAAAGCAGAATCTATTTCTCTACTCTTTGAATCTGGGTTGGCCTTGTTCCTTAGAATAGTAGATGGCAGAGAAAAAGGCACTGTGGTAGTCCCAAGCCTAGGCCCCCAAAGGACCCTCTGGCTTCTGCTCTTTCTCTTGGAGCCCCTTGACTGCCATGGAATAAGCCCACGCTGGCCTGCCAGAGAATGACAAACCATGTGGGTCTGAGCCTAGCCAGTCACCTTGTGCCGGCTGAAATCCCCAAACATGCAAAGGAGCCCAGCCAAGATCAGCAAAGCCAGCCCACAGCCAACCATAGATGTATGAGAGCCCTCAACTGAGACTACAGAAGTGCTGAGATGAACCCAGCCTAAATTGTTAGCCACAGAATTTTTCTTAAATTCTGGTTTTACACAAGTAAGTTTGAAGTGGTTTGTCACACAGTGATAGCTCACTAAGACACACCTTTCTCCTTTTTTCTTCTTCAGCACTTTTTATAACTTTATAGCAAAATATTAGCATTAAGTCTGTTTCTGTATTAAATGTATAGAGTGGTTTCTGTTTGCCTGCTGGATACTGACTATTAAAATGCTATGTCCATAGAATGGAATTCTGTGCAGTCATCAGAGTAATGTTCAAGTCGAATATGTTGACACAGGAAAATTCCTGTAGTATGTTTTTAAGTGAAAATATGAAATTATAAAAAGTACATATAGTATGATGCTAATGTAAAGATAACATATCACATATTAATAGTGATAATTATTACCTCATGTGATCTGATATCTGATCATTTTGTGATTTCTTTCCCTTAACTCTTACATTTTCTGCATTTACTAAATGTTTTATAAAAGCGTGTGTTTCCTTTATAATT TCONS_00247953 r 5' 181 TCONS_00247953 r 5' 181 EMBV3_38351 GGGAATCTCCCAGGAGCAGCAGAACGACTGCGATGGAGAGGAAAAATGACAAGATCCCCG Gene BVV0102_076217 + 0 NULL GK000018.2:14119254-14254105 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34649 CGCATGAACATCAAACCGAAGAAGGTCCGGATAAAGCACAATGCACTCTGAGGTTCCCAG Gene GeneID:515066|LRTOMT:NM_001024545:7_cdna Constitutive 0 NULL GeneID:515066 15 GENE LRTOMT LRRC51 MGC134313 leucine rich transmembrane and 0-methyltransferase domain containing EMBV3_33175 TGATTGGGCAGGGCTGTAGCCCCTCCTTGGGGATCTGAGCCCCCACTTTTCTATATATAA Gene GeneID:511468|NINJ1:NM_001038082:93_cdna Constitutive 0 NULL GeneID:511468 8 GENE NINJ1 MGC134510 ninjurin 1 EMBV3_42537 AAGAGAACACCAAGATTTCAGTATTCATCTTAACATGTAGTGATAATAACTACTGCAGAC Gene GeneID:788351|USPL1:XM_002691811:467_cdna Constitutive 2 NULL GeneID:788351 12 GENE USPL1 NULL ubiquitin specific peptidase like 1 EMBV3_02867 ATCGGCATGCTGGGTTACCCTGGTTTCCAAGCCACGACCTATGCCAGCCGGAGTTATACA Gene GeneID:527436|MSI1:NM_001081527:210_cdna Constitutive 0 NULL GeneID:527436 17 GENE MSI1 NULL musashi homolog 1 (Drosophila) EMBV3_24138 ACCAAGGCGTCGGCCGTCAGTGCCATCCATAAACTGATGCGCTGGATCCGCAAAGAGGAA Gene GeneID:520286|MON1A:NM_001015623:202_cdna Constitutive 0 NULL GeneID:520286 22 GENE MON1A MGC13272 MGC139447 MON1 homolog A (yeast) EMBV3_26319 CTTCTCTGTCTGATTTATTTCACATAGCATAATGCCTCGAGAATTATCCACATTGTAGCA Gene BVT0102_189938 - 1 EMBV3_16736 GK000021.2:785274-826953 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118474 TCONS_00120343 TCONS_00120342 TCONS_00120344 2 XLOC_072632 XLOC_073142 Coding TCONS_00118474 XLOC_072632 NonCoding NonCoding - 21:821352-826984 - TSS88940 5632 7 TCONS_00118474_6 47 0.160333806818182 1 0 0 0 0 0 0 5.08067333574493e-06 0 0 0 3.20270094580304e-11 2.64194346122871e-05 1.17112271351772e-05 1.13324447666584e-12 7.91546940729216e-16 0 1.8093728444943e-17 0.00036023749839083 0.000334677506052679 0 0 0 3.83998363429047e-09 8.98059062952058e-05 0.000262182321782645 0 0 0 2.04727064671558e-10 6.82430008571532e-05 6.19092529288674e-05 XM_005199583.1 MKRN3 PREDICTED: Bos taurus makorin ring finger protein 3 (MKRN3), mRNA. 1e-116 426 100.00 0.0417258522727273 0 noncoding 0 0 0 0 -0.237660135805969 0.179872459640384 -0.00899712457040148 0.858040495271683 AATTTTCACAAATAAACCATATTTCAATAAATCATTTAATCATTTGTATGAAAATGTATGTGTGTACACAGTATCATGATTATACTTTGGCATAAATTATGCATCATACAATGGAATATCATATAGCCATAAACAGTAAATAAATCCTACATTTGCTACAATGTGGATAATTCTCGAGGCATTATGCTATGTGAAATAAATCAGACAGAGAAGACAAATGCTATACCATTTATAGCTGGAATCTAAAAAAAAATGAACTCAGAGAAACAGGGAGCAGATCAGTGGCTGCCAGGGTAGCGGAGTAAAATGGGGGAAATAGGTGAAGGTGGTCAGAGTACACATTTCCAGTTATAAGACAGGTTCCAGGGATTTAATGTACGGCATGGTGACTAGTTAATAATTGAGGTACTGTATATTGTAAAGTCACTGAAACAGTAGATTTAAAAAGTTCTCATCACATACACACACAAATTGTTAACTATGTGAGGGGTGCCACATATACATATATCAAATCATATATTTCACATCTTAAACCTACACAATTTTGTCAATTGTATCTAAGAAAAGCTGAAAAAAATAACAGAACAAAATAAAACCACATAAGAGGTCCTAATTTCCATTTTCCATTTGATAATGGTTTCCAAATTATGTAAAATAGTACTGAAATACTTGTTCTTTAAAGGTTTTATGAAAATCACTATTTTTTTTTTTGTAAAACTGCATTCTGTGAAATAATTTACTCATATTAAATATTAGGTTATATTTTGTGTAGTCAATGTGTAATTAATTACATGAGCCTAAAATTTATCAACTTCTTTCAAGTTCTGCAATTAATTGGTATCTGTTTGAGTAATGTTATTTCGTATGTTTAATAGAACTTCTCTTTGTGGTGAATTCCTATGAATTGAGTGTGTGTCCAACTCCATATTTGCATTTTGTTGCTGTTTTTTCCCTCATTTTCTTAAGTTAGATAATGGTGTACCTATTTTACATATTTTTAAATAAATCGAATCAATCATAATATTTAATATATTAATTTCTTCCATTATTTAATATTTTTAACTCATTTGCTTCCTTAGTCATGTGTTTTGTGACTGTGCATTAAAAATCTTATAGATGTATACTATATACATGTACACATATACATATATAGATAACACATCTCACACATTTATATAAAATTATATAGAACTTGAATTTAGTGTTTTTCCAGATATAAGATGTCCAAATAATTATGTATTTTGCTACATTAAGATCAAACATTTTTTAATATTCTACCATCCTTTTCTTTTTTTTTTTGGAAAATAACCTATTCTTTCCTGATGTACTCTTCTTCTGCTGTGCTAGTTTTGCTTGTTTGTCAGTTTTTCATTTGAGATTATTTTGGCATCAATATTCACAAATGAAAATGAGACTGGGCTCTAGTTAACTCTGTGTTATACTATATTAGAAACATTCTGATATCAATGTTAGGTGTCACTCACAAGCTAACTAAATCTTTTTCTTCTCTTCTTTGGAGTGGTGTATATAACATTGCAATCTATTTAAAGGTTTTCGTAAATTTCTGGGACAAATGTCTTTTGGGGCAGTCCAGGGCATAAGTACATTCCTGAAATTTTAACTTTTCATTAGTAATTGTTCTGGTTTGATTTGTTTCTTAGATTGATGTTTGGAAAATCACGCTGAAAATTTTAAAGTCCTATCACATTCCCAGGTGAATCTGTCTTGGTGTAACAAGGGTTTATTTCCTATTTCTTTGGTGTATGCTTTTCTCTGAGTATGTCCTATTCATAGTTTCCTATTTTGTTTAATTGCACTTCCTCCTTTATTTTTTTTTATTACATTAATGGTTTATCTGTTTATTGATTTTTCTTAAATAAAAAAAAAACCAGCTTATATATTTGCATTTTATTTTTTTGCTTTAATCATTCTTAATTCCTTCTGCTTACCAGTGTGTGTGTGTGCATCTGAATGTTGTAGTTTCCTTAAAACTTACAGATCTGGATACCTAATCAATTATGTAAACTGTATTTCTAGACATTTTATATTAGTATTTAACATTATTTTTACTCTGAGTGCAGATTCAGCACTATTCCATAGATTATAGTATGCATACATTTTCATTATCTTATTCTGCCATTCTAGATGACTTTGAATTTATTCTTTCATCAAATTATTTTTGAGAGAGGTATTTTAAAAATCTCTATATAGTAGTGGTTTCAGAGTAGCCAGTGGTACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGAAGCCTGGTAGGCTGCAGTCCAGGGGGTCGCTAAGAGTTGGACATGACTGAAGTGACTTAGCAGAAGCAGCAGAAGTAGTGGTTTATTTTCTTGTCTTGAATCAGAGACCATTGCCTGTACGACTAATTTTTCAATTTAATTGACAGTTTCATTGTGATCTAATACATAGCCAGTTATTTTTGTTAGTGATCAACTCTAGAAAATGTGATATGCAATATTTTTCATGGCAAAAATTCTAACATGTGTTAATTTATTTCTTTTTACCAGTTTTGGGTTATTTTCCAAGTACCCCTTTTTTCATCCCCACCTCAACTTCATTTGACACTTAGGTTGTAGTTCAGCATTTGCTGTGGAAACAGAAATCACACCCCTGAGATATTTGCAAAAGTGAAAAATGGAACACCTATAGGTATCACATATGAATTAGAAATCTTTCCCTTTAAGTCACTGAGTATGAGATACATTTTTAGCATATTCATTTCATTAAGTCTTTACATCCACCAAACTTAAACAAATGGAGCATAAGAAAATCAGATCTGCTTCACCCAGGCATTCTTTGTGTGGTCAGAATGACACTCTGTATGCTACAAGCCCCAGAGGCTGAATCCATGAATCTCCTGGAGGAGGGAACAGCATACACTCTGAATCACTCACAGAGCAAACCTTTGTATGGCAAAGGGCTCCTTTGTTCCTAACTGCAGCAGGGGTGGTTCATTTGTCCTTATGGGCAGACCCTCAGGACACTTCACCCAGCTTCAGTCCTGGTGATATCCCTGTTATTTGATCTCTTCCTGAATGAGCTGATGAGGAACAGGGAATCTCATTAAAAAAAAAATCTTATTTCTTATTTTCCTCATGTAGGTATCAGTCAGAAATAACATAATTTTTGTTATATTTTTAGGAATTGACTAGCACATTTTTGGTTTCAACTGAGTGACATTTGCTAAAAATATTATTTGGTCTTTTTGAAATTATGAATATAAAGTTAATGTACCATTTTTCTAAGAAAATCATTTAAAAATAATGTTACCTTAAGACAAATTCCAAAGATGATCAAAGAGAAAAACTTGGTGGTGTTTTAATTCTTGTGCAAGCTTTTCTCAGGTTCACAAGTACACAAATGTCACTTTTATACATGTTATTTTTAAAATACCACCTATGTCCTAAGCATTGTCCAGATTACACTTGACATTCACAACAATCTATAAAAATATATGGTGTTATACCCATTTTTCATATAAAGAAACTGAGGTATAGGAAGTTTAAATAACTTGCTCCTGAATGCAGGGATGGTAAGATGCAGTCGGGATTACAATCATCCTTTTTCTCCCAAACCATATTATGTTCTACAGACCCTTCTCACATGCTATATAAAGATCACTTTATATAATTATTTGGGTTTAAAATATTTGAACAAAATGTGATATTTCACAACATTAGATAGTGCATATTAGGACAAACTTTTCAAAATTTTTTTGTGCTTGGCTTAAAGTGTCCTCCTTGACAGCACAGTCACCACACAGAGCTCATGTTTTGAGCCCCTGGGGTTAGTTCAGTCTTTGAGACTGCTCCATCTGGTCCCATTCTTTGGCTGCTTGGTCATCTAAGTCCCCTTTCCCCTGAATGACTAGGACAGCCTAGAAGGTGGAAATATATTTGGATTTACATTTTAGAATCACTCACCCTAGGTGCTGGTAATAACCAGGCATCAAGGGCCTCTTGACTGAGGAATTACTTGGACAACAATGATCAAGAGGGAAGGAATATGGCAAAGACCTCAGTGAAATAGGCTGAGATATTCACCCACAAAATCAGGAATCATGTAATAAGAAAGAGGCAGTTTATGAATACAGGCAGCTCAGGCACATTCTGAGTGGTGAACTAAGAAATACTGGGTCTGCAGCCCACAGATAAAGCTCCAGAACTCCAACATTCTGTAGCTCACTTATTCTCACCTCTGTCCCACCGGGCAGTTTATGAGACTCCACACATAAATATTGCACATGTGTTTCCAGTAGCTATATTAAGTGTGTCCACCTGCTCTCAGTCATAAATGTGGGACAAGAAGCAGCATGGTGCCTATGATCTGGAAATATACTACCTGAGGTTCATTTGCTGCTGTTCCACTTATTTATGCCTACAGGTCAGAGCTATATAGGCAAGTAATTTAACATCTCTCTCTCTTATTCATCTCATCATGATGGTGATAAAAATTATAGCCAGTACCTCATAAGGTGGTTCTGAGAATTAAATTACTGTTTTGAAGAGTATAAACTCTTCAAATTTGTCCTGTCTTTGTTAAACAGTTGGGGAATTCTGCCACCCCTGTGACTCAGGTCCCCAGGATATTTTCAGCTATGTTAGGCAGGGGGATAGCTTTCTGCAGTTGATACACAGCATTTTATACATGTCAACTAGGTAAACTGTTAAAACTGTGCTATTTAACCCACATTGTTTCTTTCTTTGCTTGTTCAGTTATTGAGAAGTATTCAAATTGTTTACCAAGACTTTGTAGCTTATCAATAATTTATTTGCTTATCTAATACTATGATACTAAACAGAAAATTGGAATAGTTTATCTTCTTGGTAAATTATAATTTCATGTTTATATACTTTATGTATCTCCAGTTGTGTATTAATCTTTAATAATGAACTCTATGCTCAAAAGAGTTATAACACCTCTGATTAGTTTTTCATCCTTATAATGTTTATGTATTCTTCTACTGTATGTAGTATATAGTTAACAACATATAGTTTCATTTTCATTTTAATTATGTCTGCTAATCTTCAGATTTTAAAATACTTCCACTTAATACAGTTATGGTGTATTGGCATTATTAACTTTCCAACTTACTATCTATTCAGTTTTCATTACTTTCTATATTCCATTTATTGTCTTTCCATTATTGCATTATGACTTATTTGAAAATGTTTATTATTCTACTTTAATTTTTATAATCTTATCACTTTTATGCCAAAAATTTCTGTCAAAAGCACTTACTCTGGTATGTCTATAGATGACACAAAATACTGAATACAAAGAACTGTGTATCTGAGTCAAAGACTGTTGTTTTAAATAATAATGATACAGTGGCTAAACTGCATGGGAACTCACATAGCAGCAAGCTATTAATGGCATCACAGTAATTACCAGTGTCATATTCTGTAAATTCTTTAAGATCTGTGTCTGCTACATTTAGATAGAGCCACTGAAATAGCTGTTTTCATTAGATGCTAATCACTGAAACCTGTGAAAGGGACAGAAAAATAATTTACATACCTCACACTCACACAACAGCAATCCTATCAATCTTTCAGCTTCCAGCTCAGTATTTATTTTATTAAATAAAAA TCONS_00120345 r 3' 658 TCONS_00120345 r 3' 6289 EMBV3_29089 GGGACATACGAGGATCCTGAAAAGTCCTAGAATATGCCTTGCGCATGAGTCGTCTGAGTG Variant GeneID:523435|MRPS33:NM_001037605:679_cdna 92^134 1 EMBV3_05888 GeneID:523435 4 GENE MRPS33 MGC133550 MRP-S33 S33mt mitochondrial ribosomal protein S33 EMBV3_03642 TAGACTATGTCACAGGCCCACAGTGATGGGAATTGGTGCTCCCTTCAGCCTGCTCCATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25761 TCCATTAACTTTATGATTTATGCTCTCTGACAGCATTGGGTCAAAGGGGCTTTTTTTTCC Gene GeneID:512877|CENPI:NM_001102494:11_cdna Constitutive 2 NULL GeneID:512877 X GENE CENPI LRPR1 MGC157083 centromere protein I EMBV3_39180 ACTGAGACGCGTTCTGAGGCTGTAAAAGGAGGTGTTAGAAATACTGCACTTACAGAGTTG Gene GeneID:538718|PNMA1:NM_001104991:178_cdna Constitutive 0 NULL GeneID:538718 10 GENE PNMA1 MGC166292 paraneoplastic antigen MA1 EMBV3_20207 ACACGTGGAAATGTAGACACAGTACACATCACAAGGCCTTTTTCCGCGGGATGGCTGGGT Gene GeneID:613800|ATP2B4:XM_002697120:49_cdna UTR3_Alt 2 NULL GeneID:613800 22 GENE ATP2B4 ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 EMBV3_23535 AGCCCCCCAGCCTGACCAGCCAGCAAGACGACACAAACAGGACAAGTGGCTTTTATACAA Gene GeneID:100125778|RING1:NM_001105051:30_cdna Constitutive 0 NULL GeneID:100125778 23 GENE RING1 MGC159819 ring finger protein 1 EMBV3_29087 TGTTTCTCGCATCATCCCACATCCGCGATACAAAGCGCTGAACCACCGCCACGACTTGAT Gene GeneID:100140565|KLK15:XM_002695135:660_cdna Constitutive 0 NULL GeneID:100140565 18 GENE KLK15 NULL kallikrein-related peptidase 15 EMBV3_09757 ATCTCGCCACATTTATTCACCAGCCCTGAGGAAAGTTCCCCCGAACCATGAAGAGGAGGA Gene GeneID:618218|NKAIN1:XM_002685664:429_cdna Constitutive 0 NULL GeneID:618218 2 GENE NKAIN1 NULL Na+/K+ transporting ATPase interacting 1 EMBV3_11414 GTGCCCGGAGAGACCGGTGACGAAAATATCTGGATTTTTCAGGCTTTTGTAGAACTAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12073 ATGTTTAATTCCTCTACCCCTCCCACCCTACTGTTTCTCTGTCCAGACGAGGACACTGAG Gene BVV0102_343842 - 1 EMBV3_39337 GK000005.2:114475164-114494261 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31972 CACAAGGACAAGTTCTTTGACGAGGAGGAGAGTGAGGAAGATGACAGCGACGTGGTGACC Gene GeneID:517994|CCDC151:NM_001102047:50_cdna Constitutive 0 NULL GeneID:517994 7 GENE CCDC151 MGC179281 coiled-coil domain containing 151 EMBV3_07976 CACATGGGGATGTGCGGTCCTTCCAGTCCCCAGCCAGAAAGGAGTTGGTTGTGGGAAAGA Gene BVV0102_454409 - 0 NULL GK000010.2:89044362-89052093 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24970 CAGAGTGGGGAACACACCTGAAACTAGAGGAACAGCTTATGTGGTCTATGAGGACATCTT Gene GeneID:508876|SF3B14:NM_001046017:96_cdna Constitutive 0 NULL GeneID:508876 11 GENE SF3B14 MGC137400 splicing factor 3B, 14 kDa subunit EMBV3_36378 CGTCCCTTTACTGAGATACCATGATTCCCATTGTGTGCAGTTTCCTCCGTTCCAACAAGC Gene BVV0101_000258 + 0 NULL GK000018.2:57413316-57419928 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34021 CTGGGAGGTAGGGAATGAAGATGGGATGATGCCAGGTAGAGGCTGATTTATGCAAGGTCT Gene BVV0102_141790 - 1 EMBV3_38120 GK000019.2:28161367-28184865 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093124 1 XLOC_057085 Coding TCONS_00093124 XLOC_057085 Coding Coding CYB5D1 19:28159799-28163854 j TSS69943 3418 1 TCONS_00093124_1 153 0.251316559391457 3 0.157622101628022 4.9142388274494e-05 1.76391504644036e-05 3.79040951166692e-05 1.21476786450767e-05 1.77076808305656e-06 1.46514697547318e-05 6.56055496819415e-05 0.000235547497593467 8.5309657145975e-06 0.000197418907961675 8.46904330851639e-05 2.61533307327119e-05 0.000122561479460118 0.000260109229905494 5.8119454613715e-05 0.00131374802748218 0.000143068233652322 7.7668908959171e-05 0.000175995095402249 0.000244495184851197 5.45772226190322e-06 0.000279420085729221 0.000289875294311507 0.00036461350901922 0.000336528080811665 0.000146351216907804 0.000238273809406465 0.000152590044956472 0.000106522935194809 0.000283198219226227 XM_005220332.1 CYB5D1 PREDICTED: Bos taurus cytochrome b5 domain containing 1 (CYB5D1), 0.0 5451 100.00 0.883850204798128 NM_144607.4 CYB5D1 Homo sapiens cytochrome b5 domain containing 1 (CYB5D1), mRNA. 0.0 913 80.48 0.294324166179052 TCONS_00093124_1 sp|Q6P9G0|CB5D1_HUMAN CB5D1_HUMAN Cytochrome b5 domain-containing protein 1; 3e-47 157 82.02 0.57516339869281 1 coding 0 0 0 0 0.105581716490893 0.369357993370143 -0.0244418845321148 0.6939743231055 ATGCCAAGCCGGGGCCTAGTGGCCGGGCCAAACTTTGAGTATTTTCAACGTCGCTATTTCACGCCGGCCGAGGTGGCCCAACATAACCAGCCGGAAGACCTCTGGGTGTCTTACCTGGGAAACGTGTACAACCTAACCCCGTTGGCACAGGAGTACAAGGGAGACTTGCTGTTGAAACCCATCGTGGAAGTGGCGGGCCAGGATATCAGCCACTGGTTTGATCCGAAAACCAGAGACGTGAGTTCTTCTGGAAACGGGCTGAAGGGAGGAGGCGCTGGAGGGTTGAAGAGGAAAAATAGAGGCCAACCAGAGCCCGAGATAGTGACTGCTCCCACCGTCCTCCTCTGCTTTAAAGATCCGCAAGCACATAGATCCGCTGACCGGTTCCCTGAGATACCGCACCCCCCGGGGCCGCTTTCTGCACGTGCCGCCTCAGCTACCCCGTTCGGACTGGGCCAATGATTTCGGGACGCCTTGGTGGCAAGGGTCGCGTTATGAGGTGGGGCGGCTGTCCTCCAAGACCCGGAATATCCGCATCATTAACACGCTCACGTCGCAAGAGCACACACTGGAGGTGGGGGCCCTGGAATCGATGTGGGAAATACTACACCGCTATCTCCCCTATAATGCACATGCTGCCAGCTACACGTGGAAATATGATGGCAAGAATCTGAACATGGATTATACTCTGGAGGAGAATGGGATCCAGGATCAGCAGGAAGAATTTGATTATCTCAATATGGACAGTACACTTTACACACCTGCAGTACTGCTGTACTTCAATGATGACCTCACAGAACTATAGGATGGGAGGTGTATGCTCCTGTAGACTCAAGACAGATTTGGAATTTAGCGCTTTCTGTGCCCTGGAGGAAAAGAGGTGGGGATGGGGAGGGGCCATGCCTGGACCTAGACCTTCTTTCCACTCTGGGAGCTGGCATGAGGTTCCCATGCCCTACTGAAGTGTAAAGATCCTGTTCCTCAGGTTCATTAGCATTTACTCTGAGAAAGCTAGGGAGAATGCTAGAAGTGGATTCATTTTTAGGAATGATACAAGAAAATAAAGTATCTTAGATCAGGGAGATGTAGAAGAAATAAAGTATCTTAGCTCAGGCAGAACTTTTCCATAGTAAGAGAAAGAGAAGTTCTACACAGGGATGAGGGATGGAAGAACTTTTCTGGCAATGATGGAAATGGCATGGCTGCAGAAAGATGGAATTTACAAAGACAGGAAGAGGAGATGTCTGCCACTGGCCACACAAAACTGGTTAGTCTTTCTTCTGAATAGTATTTGCAGCTGAAACCGAAGAGGAAGAGGGGAAGTGAATGGTCACCAGGTAATTCAGGCCAAATATTATGCTATATATGCTCATTTAATATAACTACCCATAAGACAGATATCATTCCCACCGTTCTACAGATAAATCTTCTGAAGCTTAGCAAGAAGCTTAATTGCACAGAAGGTACACTAGTTCGCAACCAGAATGTAAATGCAGGTCTTCCCAATTCCAAAGTCCATTTTCTTTTCAATAGGAAGAGAATATGTCAGTGTCCCAGCTTACTGCATAATGGGAACCTATAGGCCTATTGTGTAGTCAGCCATGGTGTGGTTTTTTTGTTTGTTGGAGTTATTACCTCTGGAAGGGAGTTAGCAGAGTTCTCCTGTGGCAGAGAGGACACAGGGAAGGCTAAGTGTCAGCTAAATAACAGCTGTTGAGGCTACTTCATGGTTAAACCCACAGCAAACCTTTCCTGACTCTTCTGAGGCACAGAGGTGGGTATACACTGACTCCAGGAAAACGAGAATGGGAAAGGGCCACTGGATAGGCCACTTTGGATGCGGTACAAAAAGGAAGCATCAGCATGTATATATTCATGATGGGTCTGTGCCTCTGACAGGAAGGTGAGGAAGATGGGGTTGGCCTTGCCAGATGGTGACTCTGCAAGAAGGGGCTTGACAGGGGTGATGCAAAGAGAGAAGCTAAGTCAACTAAGCTAAGTTCTCAAAAGAGAACCATGGAGGGCAGGGGCCAGATTTAGTCCGCTGTGACCTAAGCATGGAAGGGGAAATGAGAATAACAAGTGAATTTCTTGACAGTTTCAGGCAAAAAAGGAAGCAGGGAGATGTTAGTGCATCTTCCTGGAAGATGGCCCCCTAGGAGACAGTGGGTGGGCTACACAGGAGCATGCTGAGGGGCTGATTAAGAACAGCACGGATAGAGGTGGGGACATCTGTGTCCACCTTTGGCTTCAGCAGTGTCTGAATTCACTGTGAGACAGCTTCCATTCAGTCCCATGTAATGACAGAATCCATGAATTATCTGAATCATTTTGATGTTTCATCAGCTCTGCAGCTGTTTCATGTATATCTTGTTTGCTCAGTTCTATTTGAGAACCAAAACTATGCTGTTGCTCTAGCCTTGGCCTTAGGGCCTGTGCCTATGGGATCTGCCCAGACTTGCCCCTCTGCCCAAATTTCCTACTTCAGTACCTTTTGCCAGACACACATCTCTGTCCTCACACACAGTCACTCTCCAAGCAGATTATATCACCTAAATATCTCTGGGATCCATCTGCTTTTCTCAAAGCTGTCATTACTTCTGGTCTGGAATGCTTCCTAACCAGTCCTCCCATATCCACTTCTGTCCTCCCTGGTGGCTCAGTGGTAAAGAATCCACCTGCCAATGCAGGAGATGCAGATCGATTCCTGGATTAGGAAGATCCTCTGAAGAAGAAAATAGCATCCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGACAGGCTGCAGTCCATGCGGTTGCAAAGAGTCGGACACGACTTAGTGACTAAACAACAGCCTCCACACAGAGCAGAGTGAGCTCTGGAAGACAAACCTAAACATCTAACTTTCCTCCTGCAGATATCTCAGGGGCTTCCAGTTACTTCTGGAATAAAATCCTAAATCCAAAGACCTTGCATAAATCAGCCTCTACCTGGCATCATCCCATCTTCATTCCCTACCTCCCAGTCACACTGGCTGGCTTTCTGTTTACTAAACGCCTTTCTGCCTCAGAGCCAGCACACAAGCTGTTCTCCCTGCTTGTGACACTCTTCCATTTCCCACCTTGCTAAAAGTGTTTCTTCCTCACAGCAACCTTGTCTGATTTCTCCATGTAGGTCAAGACTTTCTGTTAAATCTTCTCTTAGCACCAGGCCTATTTCAGAGTGCTTATTACAATAGTAATGTTAACATTATGGATGTAATTGGCTGGCTGGCTGCTAGATTGTAAGCTCACAAGAGCAGATAGCATGTCCATCTTGTTCACTACTGTATTCCCAGTGTTGGGCACACAGTTGCTGCGCAATAAATTTTGATGAATGAACTCAAATGTTAAGTGAATTCCTCTGCCTGTAATAACTAGTG EMBV3_19002 GTCTTGTAAGATCAGCTCCTCCCTCAGAATACAAGTCAATGCCTGTCACTCAGTCGCCCA Gene BVV0101_070007 + 0 NULL GK000009.2:100479815-100596249 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236470 TCONS_00236472 TCONS_00236469 TCONS_00236473 TCONS_00236474 1 XLOC_144476 Coding TCONS_00236474 XLOC_144476 NonCoding Coding QKI 9:100472365-100482943 j TSS177013 3224 3 TCONS_00236474_5 70 3 0.695471305663232 0.00302694277557629 0.0122400161294103 0.00681105924832597 0.00145786825222488 0.00256863415462575 0.000800931844913141 0.00117040248973689 9.68983112268732e-05 0.000250832821519848 0.000411069605050495 0.000327927934595936 0.000527333050009684 0.000142891671526528 6.60636867292559e-11 0.000470192466386889 0.00449003094007675 0.00594102142982351 0.00533068508714764 0.0186910545963187 0.0147311408054727 0.00686430887682432 0.00382075968618388 0.00140036122606583 0.0051649471185838 0.0113901671288541 0.0158384783972204 0.00726070452282201 9.3461375305122e-05 0.000347141130138157 1.22787793835856e-08 NM_001007817.1 QKI Bos taurus QKI, KH domain containing, RNA binding (QKI), mRNA. 8e-40 170 100.00 0.0288461538461538 XM_005267224.1 QKI PREDICTED: Homo sapiens QKI, KH domain containing, RNA binding (QKI), transcript variant X1, mRNA. 0.0 2417 93.07 0.504032258064516 0 noncoding 0 0 0 0 0.0220923964385207 0.86438476096654 -0.0796909280617495 0.253873978109476 GAGGTGCGGTGGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCCACCGGCAACTAACCTATGACCTTCTGACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTGGTAATCGCCTTTGCTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAAAGAAATCGTTGTCCTCCAACTCAGCTTTTGTTTGTTTTGTTTTTTCTTTTTCTGTTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTGTAATGTCCCACCCTAAGCGAACGGTAAGAAGGCCTCACTTCAGAAGGGGAGACAGATGGCCCTTAACTACTCAGTGACAGAGGCAGTTACTGTGAGAGACTTCTAGGAACCTCTCTTCATAGCGAGTCAAAGCTCTCTGAATGTACTGTGTGCTGATGCATCATGCATGAACCTTTGGTCAGGGATGTCATTGGTGAAGCGATTTCAAAAAGTATTCAAAATTTGATATGCTGTTTAGTCACTACAGTGCCCTCAAAGGGCAGAAGTTGCAGCCTTTTTTATATTGCCTGCCAAAATTTGAAGTATTAGAAGTGTGCCATGAGAGAAAAACTTAACAAGGAATTTTGGAAAGTAATGCAAAGAACAAAACTGCAACACTATTTTTAAAAAGATAAATATCTGAGTTAAAATTACTGAACCTTTATTTTACACCTCCTTTAAAAAATATATGAGAACAAGGTACATGCATTATGTGTCACATTACTGGGCAAACTGTTCAAATATTTTTTTTAAACCTCCCTGTATAGAAAAAAATCATTAAGGATGTAAAAGCCATGCTTGCCTATTTGCTGTATACATGTAATGAAATTGTAGATAAAGTGTAGTGCATTGAAACAAATGAACAAAAAAAGTAGATACTTTTACTATACAAGGGTGCTGGTGCAGAAAAAATATATATATTTTTGGAAATGTAGCATTTTATACTTTCAAGTGTTATAAAAAAAGAAAAAGAACAAAGAAACCCTTTATTTCATTAAATGATTTTTTCTGGTGGTTGTCAAGAAACAAAAGACCAAAAGAGCCTTTTTGTCTTTCTTTTTTATTTTTTAAGTATTGGAATAAGTCTAAAGAAAAGAAAGTGCCTTATTTTCCTTCATGGTCATTTAGTCAAGTGTCTTGTAAGATCAGCTCCTCCCTCAGAATACAAGTCAATGCCTGTCACTCAGTCGCCCAGTATGTGAAAGAAGATGTGAGGGGAGACACATGAGTTGATGGTTTGAATTAAATGATTTTTTGCCACATTACCTTGATATCAATTTGCCAAATCTGATACTGTGAAAAAATTTGATAACTTTTCTAATTCCTAACAAGTAAGTTTAAAAGCATCGTTTTAAAATAATAATTGAGTGCTTTTGGTAATTGGTATACTTAATGTTAGCCCAGAGGATTCTGAAATAAAAATTACGTGTGATCAGAACACCATTTATTTCATAGACAAAATTAGAACTTTATTTGGTGGGCGTGTTGTTGGATTTTTCTTTATTAATCGGTGGTAATAGTATACACAGCGTTTCTAAATGACCCAAATTTAAATCAGACTCATTTCTTCCGAACCAGATCGCTTGTGTAGTCCATCTCTGCTGGTTTTAGTGGCCTAAGCCGCCACCACACACACACAATCCCACCCACACGCACGCACGCGCGTGCTCACACACACACATACACACGCCCCTAGCCCCAGTTTAACTTTAAAGGAATGTGAGAAACTAGCATCATTGTGCACATTACACTCAACTACATAAGAATATGAACTTGCAGCTTCTCCGGACGTTCAGTCAGTTTTGTAGCTGAAGTGCTTTGTGCACAAAGCTCTACATCTGAACTCTGACCTGCAGATCTAAATGATCTGTAAGTGATCATTAAATGCCCAGTACCAGATGTGGCAAATGCCGAGTGGCCGTAGGTCCCCAGCTCATCAACTCCTGCCCTCTACATACCTTCACAGCTTCACAGTCAAAGGTCAGCAGTAAGCTCAGTAAGCACCTTCGCGGTGACCTCCATCATCTTGTCTCACTTGGAAACCGTTTTCAGTTTATTTACTATGCAATAGACATTCATTGTTTTGTATTCAGCTAGCTTTGGTTTAGTGCGCCACTGCTTTGTCTTTCTGTTACACATACAGTTGTTTTGATTTATTTACCATATGTGCTGTGCCATTTTGATTTTTATTTTGTTTGGTTGGTTGAATAAATTTGCGACACTCAAACACTTGAGGTGATAGTTTAAAAACGATACCAGTATTTGATCCAGTTTCATCTCAACTGTGTTATACCTGGACATTTTAGATGTTTATCAAAGGTCTTTTATGGGGAAGAAAGTAAATGTATGAAATAAATGCGTGACATTTATGAGTAATGTTGGCTCTGAACAAACGTTTGAAAACTTAGTTGATAAAATTTTGGATCAACTAAAAAAAAGCATGACTTTTGAAATCTCTGAATGCCTTGGTTCTCAGTATTATCATTCTTTATTGAATTTCTTTCTTATTAAAATATGTAGTTTTTAAGACTTTTTTTTTTTCTGACAGTATTATGTAATTTTTAGCGCGGGTAGATGGGAGTGTCGCTTGTATGTTACGTACAGCTGACATGTGTTTTGTCGATTCTTTATTATCTCAGTAGTTTCATGCTGTGTATGTACCATAACCAACCTATTGCCTATGAGAAACATGTAAGATAATGTATTTACAGCCATTGTTACAAGTTTATAATGTATTTTTCTATCTTGTTTTATATGTATGTTATATAACATTCAAAAAGAATTTTTTTCTTGATTGAGAAAAGGATACAAAATGCAAAATCCACAATTTTGATAACTGAAAATTGCCAATTGTTTTGCAGTACTTTATTATATTGGGTGTCTTGTCTTTCTTGGGCTTTTAGTTAGCTAATGAATGAATACATTAGACACTTTTGGGTTTTAGTTGGGATTTTACATAGCTTGCATTTTAATTCTTTGGTTCTTTGCTGTTTCTATTAACCCATAGCATTATTTTAATAAATGTTATAATATCAACCTACTAACTCTGGACTATGTCTGTTTATTAACCTT EMBV3_21416 GTTCATTTTCCTCCTATATGAAAGAATTCTTCTATACCCAGCTCAGCAAAGTGTTTTTGG Gene GeneID:514113|UOX:NM_001075648:41_cdna Constitutive 2 NULL GeneID:514113 3 GENE UOX MGC128791 urate oxidase EMBV3_22023 CACCTGAATAAGACACAGTTACCAGTTACACAGTCAGAAAACTCCTTGCCAGTGGGCGCG Gene GeneID:504503|SLC29A3:NM_001080223:275_cdna Constitutive 0 NULL GeneID:504503 28 GENE SLC29A3 MGC155089 solute carrier family 29 (nucleoside transporters), member 3 EMBV3_07307 AGTGGACCGCTTTGGGGCAGGACTTATGAGATATATAAAGAAGTCTTCCTTTGAATTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23016 GCCCACCCACACACCAGACAAGCTCTTAGGGGAACTGGGATTTGGGTAAGTTCTCCTCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43110 CCATTTGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCAC Gene GeneID:100296842|LOC100296842:XM_002692376:271_cdna Constitutive 0 NULL GeneID:100296842 13 GENE LOC100296842 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_26353 AAAGACCACTCTTTCCCCAAATTCTCGCCTCTATTGAGCTGCTGGCCCGCTCATTGCCAA Gene GeneID:536051|BRAF:XM_002687002:12_cdna Constitutive 0 NULL GeneID:536051 4 GENE BRAF NULL v-raf murine sarcoma viral oncogene homolog B1 EMBV3_31406 ACCAGCCAAGATGAGGGCAGGGGTAGATACAGGCTCACTGGAGTGGTGAATTAACTTGTG Gene BVT0102_032839 + 0 NULL GK000003.2:27729418-27742478 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172687 TCONS_00172688 1 XLOC_104194 NonCoding TCONS_00172688 XLOC_104194 NonCoding NonCoding - 3:27735763-27739716 - TSS128561 3953 1 TCONS_00172688_3 59 1 0 0.00246024300925479 0.00178191545582126 0.0020249711166573 0.00101884894118885 0.000845530374007614 0.000455161968411035 0.000410122907801573 0.000773565939187925 0.000614763511266168 7.81674769445126e-05 3.12714354054976e-05 2.26137474603617e-05 5.66161266606292e-05 0.000216576316204755 0.000182108237268465 0.00230508550153577 3.68442834833151e-10 0.000244541803102445 0.00204262615819127 0.00186471396895171 0.00092154248248744 0.000248032413314719 0.000726403769370978 0.000506930162015144 0.0021646008468883 0.002215405793829 0.00218624331598782 9.62801901908587e-06 9.61596354276236e-06 0 NM_001172411.1 VANGL1 Homo sapiens VANGL planar cell polarity protein 1 (VANGL1), 0.0 996 74.22 0.405261826460916 0 noncoding 1 1 1 1 0.0625169168139046 0.599920325164549 0.0211149120519834 0.785470526400793 NNTCTGTGGATAGGACAAATTCTGTCCGGCCAAAGGATAGAGGAGGTGGCCCTGGCACGTGTGTGTGTTGTGCTGCTGCTCACTGCCAGGGCTCGGACCTCCTTTGCAGTGGGGAGATCGTGGCTGTGTGGGTGTATGTCCAGCGTGGGAGATGTGCCCTGTTCCTCACCATAGGTGGTGGTAGCTGAGTGCTCTCATTCTCTTGTCTCCTGGTTGCTTTACAGCCGCCTGTATTTACATGAGGCTGTAACCCTGGACAGCCATGAGCCTATTAGGCTGACAGAAACGGACGACCCCCCCCCCCCCCCCCGGGAGAGTGCCTGTTGCAGTCACTCAGTGAAATCAGCAAAATCGGGTCCTTGGTTTACCCTCATCTACGGGAACCCTGCTGTGTAAGGATGCATAGTTGTTTGTGGCTGTGTGTTGCAATATATGTGAGCATTTCTCTTTGAGTGTAACTACCAACAGATGGACGGCATGTTTATGTTAGCCATCTGATCATCTGTGCTATCTGTAGCAAGACTGGTGTGTATCTCAGCAGATAACTTGTGGATGGGTTTATATGGATGAGTGTGTGACAGTCCGTGTTTCTACATAGGCCCTGTGTTTGAGAGGTTTCCTAACAACACCCATCTTCTGGGAGGTTACTCTAAAGCCAGTTACTTCTCCCTCCCTTCCTTCGCTCCTTTGCCTCGGTTACACTGGCTTCTCCCCAGGAGTAAATGACTTTAGCACAGTGAGGTCTTCTAGAGCACCGCTGCCCTCCAGGCAAGTCCATTAGACTCTTCCTTGCCTCTGGACGCTATGACCTGAAAACAGAAAGAAAGAAAAGTCTAGCTCCATGATAAGCAACTGCTCCAACTTCACTACCCTGGAAGCCTTACCGTAGATTTCTTGATCTAACTTAAAAATTGAACTTCATTTAAAAAAAGTTTATGACTAAAAGCACAGAAATGGTGCCATAATATTTAAATAGTCCAGCAGAGACCCTGCAGTTGTTAAGTGATTTATTTCTGGGTAGGGTTTGTACTTTATAGATCTTGTTTTACCAAAAAAAAAAAAAAAAATCACTACCATGAATTTACTCCTGTGTAACCTTATGGTCATAATCCATTGTAAATGAAATATGAGTTGTTTTCCTAAGCCCAGAGCACAGTTTTTGAATGGTATTAGGAGCCATAGACACTACTTTATTGAGCTTTAATCAAGTGGATGCCCGGAATGTTAGATTTTGGATCACATTTTTGAGAAAACATATTTGGGTCAAAGAAGGAAGAGAAGGGTAATAGGGTGTGTTTATCAGCTATTGTTATGTTAGATGCTGTCCTCGAAGGTGAATTCCTTTAAATCAGGGGTTATCTCTGATTTTTACAGGTGAGAACCAGGATGATCCGAGAGAGAAGAATGTGCCTAAAATCTCACAGCTAATAAATGAAATTTCCCATCTAATGTTTGACTCCAATCCCATGGTCACTGTACCTTGAGATATTACCTATATAATTTGGCATTTTCTGGATGTGGAGGAGAGAGAACCAGAGGGCACTTAACCTTGAATCAGAACCTGGGGAGGGGGTGTTCATTGGAGATGGAATCGCTTCTCTTTGACTTTGGGTTTGTACCCAGACTGTGGCTCCAAGGAAAGCTGCCCTGTGGCACTGGCAGATTTCCTTGGGACTTTTGATGGAAAGAAGTTGAAAATTCCCCTTCCTCTAGGAAAACCAGCCCTGCCAGTGCGACACTTGCTGTAGAACTTGGGTGCTATTGTTCCTGGCAGTCACTTTGGGTTTTGCCCCTCCCACCCTTCCAGTCCCACCTGCTGGCTTGGGGAGGTGTGCTGGGGCTGACCTGGCCTCCTCCTGACCTGAGGAGGCCTCTTCCTGGTGCTTTGTCAACCTTGTACCCCAACAGCGCCCCCCCAGCCCGCCCCCGTTGAGGTGGGAAGGGACTGCCTACAGCCCCAGCCGAGGGAGGTTTGGGACTGGAGCCCCTGGCCTCCATGCCTGACTTCCTTATTCTCAGCAAGCGCTTCCGTCACACTACTTTCCCCCACATTTGTCCTCGAGAGTTTTAATCAAGAGACCTAGACCAGGGCTCTGAACACACCGTTTGTGTCTCTTCCACCGTCTTGAGGTTTCTGTTGCGCATAAACTACCTTCTTCTTGCCTGCTGTTTGCTCTCGGTGGAGGATAGGAAGGGAAAGATGACGCGCCTCTCAGCTTTGCTATTAGGTTGACTAAAAAGTTTGCTCAGACTTTGCCATAAGAGGGTATAGAAAAGCCCGAAGGAACTTTCTGACCAACCCAATACTTACTAGGAAAGAGCACGACATTTTCAAAGGGTAGGTAGAAAATGTAAAACTACTGACTAAAAGTAGATTTTAGTACTCTGTGTCCCTTTTACCAGGCCTGTCCCATTTCTCCTTAGATAACCCAATTTGTTTTGTATCACCTGAAACATAAACCTCTTCAATGAGCTGTTTTAGAGCACTCCAGCACAACTGCAGATTTCTGATACCTGAAGCAGTGCAATCAAATGTTACTCCCAGTATGGCACCGGGAATCTACAATTGATATGTCACTCAGCTTGAAAACATCAGTGTTTTGTCCTTGCTTTGGTGGGATAAAAACGCCTCTTATCTTAAGCCCTGGGGACAAATGTGACCAACCCCCAGGATTTTATCTTGAGTGTCTTTGGCACTTCTTTTGGCACTGAAATAATGTTTGGATAAAAATAGTTGAATATACAGTGTCTGGTTTTATATTTGCTTGTTCTTATCTGAGTTTTCCCTTGTAGACATGAACTTTCACTCTGAAGGAGGTCATCCTTTAGGAGTATTTAAACCCCCAAAAGCCCTCACCTTGGGAAAGGTTCATATCTAGGGACCAGAGACTGTTGCTCAGGGAATTAGTAATAGGACCTGGACATCTGATCTGCGGGTGTCAAGTCTAGTTCAGTTCATGTTATAGGGAACTTAGTTACACATCATCACCAGTCCAGGGGTCAGGTGGAAAGAAGTGGCTGACACTTTTCATTTGCCAGTGCCCCACAGGTATAGAAATAATAGAGTATTCATTTAGCATTGATTATCGTTCTAAAAAAAAATCCAAAGTGTGCTAATAATTCCTTATTGTTATAATGGATTCACAGTAGGCTTTAGCTAAATAGCAAACTCCTCTGGGACTCCTAAATTATGACATAATTAACAAACTTTGATTTTCAAGAAGTTGTTTATGACAGCTATTGCCTGGACTACAGGACACCAGCCAAGATGAGGGCAGGGGTAGATACAGGCTCACTGGAGTGGTGAATTAACTTGTGTTGTCATGACCACTTCTTCAACAAAGATGCTAGGGAGAAGACCAGAGAGACTGGGACCGGGTCTTACTCAAGGAAAATTTATTTAACAATCACTTTTGTGTTGAAAGAACTTTGCATTTCTGGATTTAGAATCCAGTATCAGTCCAGCGAGTTCAGTAAGGAAACCATCTGTCTCTATCTGATGGAGCCATAACTGTGCAGAGATGTGGCCAGGGGTCTTTTGTGTTCTCTCTTATTAGTTAATACCGCACTTTGTAAGCAGGAGGGGCAGTTTGGCTGGTTAGCAAAGTCCACAGTCACTAGATAGGTATGACAAAGTCTGAGTGTGACTTCTTGCATAAACGGGGTGGTGGGCTTTATTGAGATGTTTCAAATATGTGAATGAATGAATTACACTACCAGCAACCATCTGCCCAAGTACATTTGTATACATTCATAAGGTGTACCCTGTGAAGCCTCTTCTCATTGTAACATCAGTAACAAAGTTAGAGTCTTTATAAGGGGCATGGTGTACCTGGTATCCAAGTTATTTTGTTCTCTTTTGGGTCTCCAGTTCCAATGAACTGTAAAACATTTTACATGTTACATTTTTTATACTGTAAAACTTGGAAAATAAACTGAAATCCCAAATTACA TCONS_00172689 TCONS_00172690 TCONS_00172691 TCONS_00172692 TCONS_00172693 TCONS_00172694 TCONS_00172695 TCONS_00172696 TCONS_00172697 TCONS_00172698 TCONS_00172699 TCONS_00172700 TCONS_00172701 s 3' 110 TCONS_00172689 TCONS_00172690 TCONS_00172691 TCONS_00172692 TCONS_00172693 TCONS_00172694 TCONS_00172695 TCONS_00172696 TCONS_00172697 TCONS_00172698 TCONS_00172699 TCONS_00172700 TCONS_00172701 s 3' 110 EMBV3_09811 CGGAGGGACTCCCATCCCTGTGGCCGAGCCCTCAAGAGATGGCTGCCCAGTGCGTCACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15919 CAACGGAGTACTTTACAGCAAGGAAGAGGAACATACTGTGGGCGCAAATGACAACACGGG Gene BVV0102_162788 + 0 NULL GK000007.2:83227247-83362790 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04141 CCTGCTCACCTCTCCACATCCTGTTAGCCCTTGGTCATCTTCCAAAACTCAACGGTGACA Gene BVT0102_061146 + 0 NULL GK000002.2:103134123-103278271 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106036 TCONS_00103218 TCONS_00106037 TCONS_00106042 TCONS_00106040 TCONS_00106038 TCONS_00106035 TCONS_00106041 TCONS_00106039 2 XLOC_062701 XLOC_062042 NonCoding TCONS_00103218 XLOC_062042 NonCoding NonCoding - 2:103147908-103175209 - TSS76681 453 0.41280353200883 2 0.983479853479853 0.00148628780058024 0.00227473289499059 0.0041415655425518 0.00153672386611547 0.000716615261806789 0.000364383020502223 0.00100722382430108 0.000103753584248285 0.000515221502402546 6.012086769456e-05 0 3.0730411486134e-05 1.17194314875372e-05 0 0 0 0 0 0.00345702256890439 0.00330268604718569 0.000498303840018123 0 0 0 0.00196592924001721 0.00201557017029654 0.0019018755716354 1.16509345126483e-12 2.1931846494224e-05 0 0 noncoding 1 0 0 0 -2.86205045339404 0.0183497820401744 -0.057566553014827 0.394716044321729 GAATACAAAATAGTCCTTTTCTCAAAAAACTTTATAGCCTAGTGAAATAGAGACACAAAACTGTCAATAAAATTTCAATATATAGAGGTTTGCACAGGATGTGATGGAGCATAAAAGAGGATTACTTCACATTGGATTTTCGAGTATGCTTTCCGGAGAAAAGATGTCACCGTTGAGTTTTGGAAGATGACCAAGGGCTAACAGGATGTGGAGAGGTGAGCAGGCGGTTGCAGCCAAGGGCTCACCTATGCTCCACACGGCATCAGTGGACTGGTGGTATTCACTTCCCAGGTGACTCACTAACAGCTGGTCAACTAACGCTGGCTTCAGGCTGGGAGCTTGCCCAGGGCTCTCAGTCAGGGACCTTAGTTCCTCTCCACACGGCTGCTCAGGCTTCCTCTCAGCGTGGTGGCTGGATTCCAAGAACTGGTTTCTTTCTTTTTTTTTTTTTCC TCONS_00103217 s 3' 13787 TCONS_00103217 s 3' 13787 EMBV3_18998 GAGATCGGATGGTACATTTACTTGAAAGTGTTGGCCTAAAATCCATAGTTCCTGATGGGG Gene GeneID:508712|CCBL2:NM_001075370:129_cdna Constitutive 0 NULL GeneID:508712 3 GENE CCBL2 MGC140498 cysteine conjugate-beta lyase 2 EMBV3_25753 GTACTGCCTCTTGATGGAACCCCAGCTGTAACACTAAGTGGGTAGCAATTCCCTCTAGAC Gene BVV0102_281056 + 0 NULL GK000010.2:10313056-10350690 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012525 TCONS_00015923 TCONS_00012526 2 XLOC_007884 XLOC_008589 Coding TCONS_00012526 XLOC_007884 Coding Coding JMY 10:10242460-10324151 j TSS9499 7753 1 TCONS_00012526_5 724 12 0.905239319378137 7.34568485325553e-15 0.000106653484666796 5.30033445285006e-114 8.18772176410338e-06 5.83899751123592e-14 8.01147849833649e-65 1.43788454122294e-10 5.28541577242034e-47 3.4369661439187e-05 0.00355144209342736 0.000793403341072911 0.000657540213941588 6.36190714138977e-45 0.000157402479877359 3.68667588345776e-05 0.00197664535752132 0.00122314445426595 0.00112828493007364 1.29117218650709e-05 6.20413270708298e-06 1.24980658079206e-140 0.00247563257438308 0.00224550551204856 0.00154436660529121 2.58730065403968e-05 4.00018684284548e-05 3.27646747491974e-09 0.00180315271627341 0.00166464179018238 0.00348126974939589 XM_606924.6 JMY PREDICTED: Bos taurus junction mediating and regulatory protein, p53 cofactor (JMY), mRNA. 0.0 1.361e+04 100.00 0.973558622468722 NM_152405.4 JMY Homo sapiens junction mediating and regulatory protein, p53 cofactor (JMY), mRNA. 0.0 3892 83.23 0.480588159422159 TCONS_00012526_5 sp|Q8N9B5|JMY_HUMAN JMY_HUMAN Junction-mediating and -regulatory protein; 0.0 1244 90.33 0.998618784530387 0 coding 0 0 0 0 -0.0627834233089874 0.629758246111189 0.0381362485341594 0.415218714361123 GGGGCGGCCCGGGCGGGCGCGGTTCTTGTAAACAGACCCAGCCGCACGTGACCATGTGAACTACCTGCTCTGGGGACGCGCATTGTCTTTCCCGCGAGCCGCGCCACAAAGGAGCGCGACGAGTCCCAGCTCGGAGAGACAGGCGAGCGAGCGGGGAGAGCCGGCCGGCGCGCTAAGATGGCTGAAGGCGCCCGGCGAGGGATCTGCGCGCCGTGCACCAGCAGCTGTGCTCTGTGAACTCGCAGCTGGAGCCGTGCCTGCCGGTGTTTCCGGAGGAGCCGTCGGGCATGTGGACGGTGCTGTTCGGGGGCGCCCCGGAGATGTCCGAGCAGGAAATCGACACGCTGTGTTACCAGCTCCAGATTTACCTGGGCCACGGCCTGGACACCTGCGGCTGGAAGATCCTGTCCCAGGTACTGTTCACCGAGACCGACGACCCGGAGGAGTATTACGAAAGCCTGAGCGAGCTGCGGCAGAAGGGCTACGAAGAAGTGCTCCAGCGGGCCAGGAAGCGCATCCAGGAGCTCTTGGATAAGCACAAGAATACGGAGAGCATGGTAGAGCTTCTGGACTTGTATCAGATGGAGGACGAAGCCTACAGCAGCCTTGCAGAAGCCACAACTGAACTCTATCAGTATTTACTGCAGCCGTTCCGAGACATGCGGGAACTTGCTATGCTACGAAGACAGCAGATCAAGATTTCTATGGAAAATGACTACCTGGGCCCCCGAAGAATTGAAAGTCTACAGAAAGAGGATGCTGACTGGCAGCGGAAAGCCCACATGGCCGTGCTGTCCATTCAGGATCTTACCGTCAAATACTTTGAAATAACAGCTAAAGCTCAAAAAGCTGTGTATGATCGAATGCGAGCAGATCAGAAGAAATTTGGTAAAGCGTCATGGGCAGCAGCCGCTGAACGTATGGAAAAACTTCAGTATGCAGTTTCTAAGGAGACTTTGCAGATGATGAGAGCTAAAGAGATCTGTTTGGAACAGAAGAAACATGCTCTAAAAGAAGAGATGCAGAGTCTACAGGGTGGTACAGAAGCCATAGCTCGATTGGATCAGTTAGAAGGTGATTATTATGATCTGCAACTTCAGTTGTATGAAGTGCAATTTGAAATCTTGAAGTGTGAAGAGTTACTGTTGACAGCACAACTGGAAAGCATCAAAAGACTTATATCAGAAAAGAGAGATGAAGTAGTATACTATGACACTTATGAAAGCATGGAGGCCATGCTGGAGAAGGAAGAGATGGCAGCGTCTATGCATTTTCAGAGAGAAGAACTACAGAAACTTCAGCAGAAAGCACGCCAGCTGGAGGCAAGACGTGGACGGGTTTCGGCCAAGAAAGCATACCTCAGAAATAAAAAGGAAATTTGTATTGCAAAACACAATGAAAAATTCCAACAGCGCCTTCGGAGTGAAGATGAATATAGAACCCACCACACAGTACAACTAAAAAGAGATAAATTACATGATGAAGAAGAAAGAAAAAGTGCCTGGGTTAGCCAAGAAAGACAGAAAACACTGGATAGACTTCGAAATTTTAAACAGAGATACCCAGGCCAGGTCATACTTAAATCGACTCGATTGCGACTGGCTCACGCAAGAAGAAGAAGTACAGCCAGCCCCGTGTCCTGTGAAGACCAGTGTGACAGCCTGCCAGGAGTGCTACAGGTCGAAGAGAAAAGGGAGGGACTGGACGAAGGAAAGGCCAAGCTCGGGTCATCACAGGCAGCAGACGCCCAGAGCCTCACCCTACCTGAAGGTCATCCATCAGCACAACTTGAAGCCACCTCATCACTTCCCAGCGGCTTTACCGCTGACCTGCCTCCCCCTGTGTCTTGTCCACTGTTAAACACTGTTGACTGCAAAGCAGGCTCCGTCCCAGCGGGGCCGCTCCCACCTCCTCTGCCTCCCACGCCTCCCCCACCTCCCCCACCCCCCCCGCCCCCCCCTCCGCCGCCTTTGCCTGTGGGTCAGGACAGCGCCCCCGAGACCCTGGAGAAAGGCCTGCCCCAGATGGAGGGGAGCGAGAAGAGGATCCCAAAGTCAGCCAGTGCCCCTTCAGCACACCTCTTCGACAGCAGCCAGCTCGTCAGTGCCAGGAAGAAGCTCAGAAAGACGGCTGAAGGCTTGCAGAGGAGGAGAGTGAGCTCACCTATGGATGAGGTACTAGCTTCCTTGAAGCGTGGTAGTTTCCATCTGAAAAAGGTTGAACAGCGAACTCTGCCTCCTTTTCCTGATGAAGATGATAGTAATAACATCTTGGCACAAATAAGAAAGGGCGTAAAATTGAAGAAGGTACAGAAGGAAGTCTTGAGAGAATCCTTCACACTTCTGCCTGACACAGACCCTCTAACACGGAGCATCCATGAAGCTCTTAGAAGAATCAAAGAAGCATCCCCTGAATCAGAGGACGAAGAGGAGGCTTTGCCTTGCACAGACTGGGAAAACTAACAAGTAACTCAACGAAAAAACACCTACAGTTGAACATTGGCTCTTGAAAAATTGTAAACATTTGGTTCCACGATTGGATTCTATTAGATCCAAAATGCATTGGCTCAGTGGTGTGAAAAAGGAAGCACAACGGGCAAGTTACCACTTTTCCAGTCATTCCAGTAGATGGTGGTTAACATGAGTTTTAGATGTGCAATGTTCCTGACTGCAACGAAGAAACGGCCTTCTGAAGATTCCTGTTTTTAAGCACCTTCCCCACCTGTCCACCCGTTTACATCCCTGTAGTGGCCAGTAAAGCTCGGGGTCGCTGTGAGTTGGAAGAAACACTGGGTTGACGGATCTACTGTGAGCTGTGTTGAGACTGCTTTAAAATCTATCGTTCAGTGCACTGAATAGTCACCTGCCCAAGATACAGAGCTTGTTCTGTATCAGCTTAAATAGTGTGACCCTCTGAAAAAGAAGTTAATTGTGATAGCTATAGGGTAGGAATTGGAAGAATCAGATGGAAATGCACTGACAGTTCCCACATTATTCATCTCCAAGGGATTTTCATAAAGATGCTTAGCAACATCTGAAAAGATACACGACCATGGAGATACACCTATAACTGTGTTTACCACAACGTGATACATTTAACATGGCATATTTTTAGAAGCCCACACATGTAACAGTTTGTAAAGTTTCAAAGTAAAAATTTCCATGCTTTTAAATAGCTCTTCATAATTGTGAATTTATAATAGTTTGAATTTTATGTGCAGCTTTGTTTATGAGAAGCAATACTTTGTAATTTGATAATATTTCAAATTATTTTTAGCCTTTTCGTTTGAACTATTGCTTGATTACTGTAACTCAACATGACTTTCCTATTGAGAATCAAAAATTAGGATTCAATAGTAGGGATGCAGATCTTAAGTCCTGCTAACACAGACCATTAAAGTTTTTATTTTTATGTTCCACAGTGGGAGAAAAACATGCTCTACAAATGTGCAGAAAGTAGACAGGCAGAAAAGCCTCTTTGACTGGCATTTCACTCTTCACATGCTTTGAGTTGAATTTCCGGAGACAGCCTTCGTTATTGTCAATAAAATTTTAAACATATGTATGTAGCTCTAGGTGCCGATTTTGCTGTAATGGAGTCCTGAAGAATGCATGGAGCCGACATGAATTCTCAGCAGGACTGCTGTGGGCTTGAATGAAGGTAGATATGTTGGATCCCAGTTTACAGTACTCTGTAAGTGTGATTCTGTATAAGACAGGTCTTCACTGGTACGTGAATGGCTAATGTACCAAAATGAACTTTGAGGCAGTTCTCTAGCCTAGACCCAGAAAGCAGTCCTGGAGTAAAAGTCCTCCAACGTATCTGTGTTGGTGATCCTGAAGAAAAATTACACTCACACCTTTGTCACTTGAAAATGCTATTTCTTTTAAAATAATTATGGAGATAATTTTCTGTCAACAGGTTATATTAAAAAAAAATCTGTTTAAATGTTGAAAATATATTTATTGATGAGACTATGAGCATTGTCACAATATATTGGCTTTATTCTAGCATCATTCTCACACCTTGTCTGAGAATATTAGAAATACAGACTTAATATAGTTAACTCAGTCTCCTGATTACAGTGGAGGTGGGTTATAGATTTTTGTAACAAACCTTCAGCAATGCATTGAAACATGCCTTTTAACCTAATGATTGATTGGATGGATATATTTGAAAAAAAAATATTTTAGCACATTTGCAAATCTTAAATCATGTATCAATTTTATGCCTTTGAATGCTTGTTCATATCATGTTTGGGGGGGGGTTGTTTCATTTATTGACATTTAGAAAAATACAGAAGGATCTGGTGTCATATTAACAGCAGAAGCTCTGGAACTTTAATATGTCTAGAGGGAATTGCTACCCACTTAGTGTTACAGCTGGGGTTCCATCAAGAGGCAGTACTCCCTTTTAAAAGGGTCCTGTAACCTGTTTTCCTGAGCCATGTTGTAATAAATCTCTAGCAGATGATGCAGGGTGTTCAGATCCATGTGAATCCTTGAGGAATGAATCCATGGCTGTAAGCACAAGCCACCCTGGCACTCTGCGAAGGTTGTCCTCATACCTGAAGATAGGAGGTTAAAGCAGAATCTCACTAGCAGCCCCCAATGGCCATTCTCTGGTAACAACTTTCTCCAACACATCTACTTCCCCTCCTCCAGATTCAGGTTCCTCCTTCCACAAAATTCCATGTTACTGGAGGTCATCAACCTTCGGAGTTCTCACCAATAATAGAGTTTCAGATAACTGCAGTCCGTTTGTCCAGTTGAATCCTCATGTTAATTAAAAGTCAGTTTCAGAGCCCCCCAAAATTTATATCAATGCAAGTATGGTTTCCTTTTTATCTTTGCCCCTAAAAAAATGAACATCTCTGCCCTTAGTATTAAATTTGTATATATTTAGGTAGGACGGTGCTTATATATGATCATGTTTCCAGTTCCAAATTTGCCCATACTACTAATGTGGTTTATTTGACAGTTATATTGCTGTTAATATATCATTTCCATATCAAAAATCCCCAGACAGCTGCTTGCTTATACTGAATCAATGTATAAGTTAACTTACCAATCTAGTCTCAACTCAGTATACTTAAAATAGGGAAACAAGTAGGTGGTGACTTAGTTGTTTGGAGGTTAATGTTACTGCTCACTTGACTGTCAATTTTAAATATTTCTTTTACTAATACAACTAAAATTATGTACATATAATCAACGAGGCCTGTATAGAAAAGGTATTCCTAATGATTTAAAACCCTAAGGGTACTGTAGTGTAGCAGCAGTATGTGGAAGAAATATTTGGCTAAAGAATTTTAAAAGATGAGAATTGCTCACTTAATGTATATTTTACAGGCTTACTGAGTCTGTGAGCAGCATAGAAACAATCATTCTTTAGTTCTTCACTGCAGAACTGAGACATTTCTATAAACGCACAGCTGTAACTGTTGATCAGGAGTAAGTATGGAGGAGTATTTCCACAGTGAAAAATACGGGGGCTTCTCTTACTATATGGACACACAGAAAATTTATTACTCTGTATAATGAGGGAGGGAAAAGAAGCCTTGTTTCTACAAAGCTGAAATATGTAGCAGTATTTGTTAACTCAAGGCATGACCTCTCTCTGTCATAAAATGTGTTAGATTTGAAAAGCATACTTTGGCCATAGCAGACACTAAGAATTAAAACTCTTCTGTCAGTGGAACAAAAATGAATGGGCAGCACTTTCTCTGTTTGAAATGGGACCAGTATACAGTTAATACATTCAAATTTATACATTCCCTAAGACTGTTTTTAAATTGCATTCATTGTGTATATAAGAAAAGCCTTTTCTTTCACTAAATACAAGGTTTTCTTTTTAAACCTTTATAATTTTTTTTTAAACCTCTATGACATCAACCTGTAAAGTGCTCATGGGTTACAGGCCTTATCAGGGAGTTGAAATTTATATACATAATACCAAATTATTTGTAAAAAGTCTTTTTGAACAGCTATAAAATGTTTAAAAACTGTGGCAGATGCAGTTATCACACATCCACTTGATAGTGAAAGCAGAAACCCAACAAGTTTTACCTAATTCTTGCACTGAATTTAAATAATATAAAGTTAAGTTAAATGTGCATTTTAAACAGAATTTATTTCTCATTTATTGGTTAGCATAGAACAATGCTTAGTGTTAGAGAGTTGATCACAAGATTGGTTTTAGAAGGAAGACGGTAAGAAAGCAGAAGCACCTTACTGGGGAGCATGTTGCATTCATTTAGTGCTACTGAACAATTCAGTAGTGATTTCTGAACTTTGCTGCAAAGTGCTCTTTATTTAAAGCACATAAAAAGAGTCTCTGCTTAATTGCTTTGTAAAGTGAAGCAATGGTATTTTTTATCCTATAAATATAGTCTAATTTAAAAGTTTTTCCTACAAAATGAGTTTATATTGCCGCCTAAACTATCATCTATGTAAACAAAGGATTTTTTAAAAGGCGAGAGAGGGAGTCTGGATTGTGAGAGTGTGTGTGTGTGTGTGTGTTTAATGTTTGTTCATTGAATTATTTCAGAGATATGTTCATTCTAAACATTTCTGTTTTACCCACAGTAAATGTACAGCTTGATAGTGGAGGGATTTAATTGACTGAATTCCAAATCCGTAAGTGTCCAAACACACGAAGCGCACCACTGTGAGGTGCGTGTGCATAAAGCGCTTCTGGGGCTGACGCACTAAACATGTTACCAACGCTATACTGACTCTTGAAGCAGCTTGTTGTGAGAGTAAGGAGGAAGTTTGGGGTTTTCTGGTCAGGTGTGACTAAGAGAGGCTCCAATTGGTGAGTTCAGGAAAGTCTCTGGAAAGTGATTTGAGATGTATAGAAAAGGTATGGGTGTTGGTTAAAGAGTTCAGTTTTAAGAAGGGAAGTTTTGTTTTTTAAACTTGCATGTTCTATGGTTAACTATCAACAAGTTATTCTAGCTTTTCCCAATACTAATAATATTGGTTTTAAGAATTGTCCATAATCACAAGATGACGTTATCCCTTCATTTGTGACCAAAGAAGGGTAGACAGTACAACCCATGCAGGTGACTTGCTACTTCCTCAACTTGGACAGGATCCCCACTGCGCCATTGAATTTCTTACTGTACTGTATGTCTTGCCAAGTGTGAAACCATAATATATAATTTATGAAGAACTGAAGGCTACCAATCCTTTTGCATGAATAAAAAGCCCATTTGGGCTCATGAAACTGACATGTCTTTTAGCCATTCCGGTTAAATGAAAATTTTAGTGGCAAACCAGTTCACCACTTACTAGCTTTGTGCAACATTACAACGGCAGAGGCAGAACACTAGCACCTTGTGCTTGGCTTTCAGGACGGCTTTAACACCGTTACACTAAGGTGGACACTGTGCAAAACGTATTGTAAATGGCAGCTGCTGCAGATTGACAGGACTTAAGTATGCTCAGTTAACATTCTAAAGTATTAAAAGCACAGAGGAAAAAACTAAGCATTTACAGCAATACTACGAGGTCTTTGATAATGCTCTGACTGTTGCCTTTTGCTCTTTAGTGCAACTTTCTGCATTGTAATGACTGTGTTGCTTTGTATTTCATGTTTTTTACACTCATGACTTCAGAGTTAAGTACTTGTACACCAAGTATTGCAATCACCTTTCTCTTCTTGTACATGCAATGTAACAACATACAGTTTTGGTGCTTAACAATATTCTTTTTTTCTTTAATAAAAGATATTTATTGAGTTAAGCTCA EMBV3_16157 TACCCTTTGGCTCTTACTTCAAACAACTGGGTTAATTTATGTGCGTCAGCAGCCCTGAGG Gene BVV0102_044419 - 1 EMBV3_24451 GK000018.2:14377402-14398152 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24043 GATTCAGAACACTAACATTGACAATGGGCACGCCTGGCACATGAGTGTCTGTCACAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27188 CCATCTTCCTGGATGTGATCTACATTGGCATCTCCTCCCTTCCGGGTAGCCCACTGGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32110 ATGAGACGGTGTGGGGTCTCCGCTGTGTGCCTGTCATCACCTCTCTGTCTTTTTTCCTAA Gene GeneID:513621|VAMP1:NM_001075630:23_cdna Constitutive 0 NULL GeneID:513621 5 GENE VAMP1 NULL vesicle-associated membrane protein 1 (synaptobrevin 1) EMBV3_31955 CCGCTTCGCCAGTAGCCCGAACACTGACTCTTCCACTGTACAAAAGTACTGCCCAGCATA Gene GeneID:540823|ZNF367:XM_002689831:26_cdna Constitutive 1 NULL GeneID:540823 8 GENE ZNF367 NULL zinc finger protein 367 EMBV3_36793 TCCGGTTCCTGGGCAGAGAGAAAGGGTACAGGTTCATTTTTCTGACGACAGCAGTCACCA Gene GeneID:526538|VPS33B:NM_001046284:129_cdna Constitutive 1 NULL GeneID:526538 21 GENE VPS33B MGC137868 vacuolar protein sorting 33 homolog B (yeast) EMBV3_19200 TGGAGGGATGACCCAGTCTCCAGTGGTGCTCCTTTGTCCATCTTCAGCGCTAACAGTGAA Gene GeneID:514772|GPN2:NM_001098973:167_cdna Constitutive 0 NULL GeneID:514772 2 GENE GPN2 ATPBD1B MGC166407 GPN-loop GTPase 2 EMBV3_10200 AGTCATGGCCTTTGACCGCTATGTGGCCATCTGTGACCCCTTCCACTATGTCACCATCAT Gene GeneID:515482|LOC515482:XM_002691546:32_cdna Constitutive 0 NULL GeneID:515482 11 GENE LOC515482 NULL similar to olfactory receptor 355 EMBV3_36325 CTTGGTTCAGAAGGGAGCCAAGTCGAAGAAAGGACCGGCTTTGAAAAGAGAGGATTCTGG Gene GeneID:529920|LRGUK:XM_002686953:27_cdna Constitutive 0 NULL GeneID:529920 4 GENE LRGUK NULL leucine-rich repeats and guanylate kinase domain containing EMBV3_26379 CAAGCCTTACGTTGACCACCAAGGACTCTGGATCGATTTGGAAATGTCCTACAACGGGTC Gene GeneID:100336704|LOC100336704:XM_002696099:162_cdna Constitutive 0 NULL GeneID:100336704 19 GENE LOC100336704 NULL testis expressed sequence 2-like EMBV3_37673 CAGTTAGGGGAGACGGGGAAAGTCACGGATATCAACCTCCCGCAGTACTTTGCCATCATT Gene GeneID:518001|CCDC63:NM_001075763:183_cdna Constitutive 0 NULL GeneID:518001 17 GENE CCDC63 MGC134016 coiled-coil domain containing 63 EMBV3_38609 GGATGAACTTCGAGAACAAGCCAGAGTTGTGACTCTACTGGGCAAAATGGAACGTCTTCG Gene GeneID:540078|LOC540078:XM_002696044:333_cdna Constitutive 0 NULL GeneID:540078 19 GENE LOC540078 NULL similar to Y39A1A.9 EMBV3_38409 CCTATAGAAGTTAATTTTCTTCGGGGAAGTAACAGTATATAATTGTACAGTGTAGAATAC Gene GeneID:520448|KCNMB4:XM_002687380:25_cdna Constitutive 2 NULL GeneID:520448 5 GENE KCNMB4 NULL potassium large conductance calcium-activated channel, subfamily M, beta member 4 EMBV3_07418 TGTACACAGAACCGCATCCAACGCTCAGACATGCGAAACAAAGCAAACCACAGTGAGGGT Gene GeneID:533746|DPYSL2:NM_001076000:1_cdna UTR3_Alt 2 NULL GeneID:533746 8 GENE DPYSL2 CRMP-2 DRP-2 TOAD-64 dihydropyrimidinase-like 2 EMBV3_12669 CAGTGGTAAAGGCGTGGTGAACAAGGATGAGTGGAGCAAATGTTCGCCCTGACACCCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02618 GCGACCGTAGCGGCAGAAGCAGCAACTTGCCTGTGTGCAGCCCCAAACTGAGAAGAAGAT Gene BVT0102_243492 + 0 NULL GK000010.2:20764006-20769410 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019792 1 XLOC_010471 NonCoding TCONS_00019792 XLOC_010471 NonCoding NonCoding - 10:20768204-20769209 - TSS13682 1005 1 TCONS_00019792_1 48 1 0 0.00255868031593201 0.0007998754143667 0.000791883744745992 0.000818020897470726 0.00247596349715374 0.000355925707847959 0.000458412645324949 0.0018538629765177 0.000792938868850405 0.000237453262733502 0.00110245400720055 0.000120968314838763 7.42302197568542e-05 0.000454017542303499 0.000707859734479622 0.00278570222210526 0.000181716498334337 0.000424423442789432 0.00189084267924575 0.0018604702628986 0.00163718357787085 0.000339652834564605 0.00141490313850042 0.00035030727571079 0.00126160253735128 0.00133197954440188 0.000542190116031951 0.0002102625247934 0.000198048416839127 0.000221346110736642 XR_236052.1 LOC101905118 PREDICTED: Bos taurus uncharacterized LOC101905118 (LOC101905118), 7e-98 361 100.00 0.198009950248756 NM_006156.2 NEDD8 Homo sapiens neural precursor cell expressed, developmentally down-regulated 8 (NEDD8), mRNA. 9e-27 125 83.47 0.118407960199005 0 noncoding 0 0 0 0 -0.526930150355458 0.0343373391797632 -0.108319542506281 0.0694974752499619 GAGGGTTGGGAATTAGTGAAGAACCATGGGAGGCGGGATGGAGATCGCGTACTAGGATACTGATAACTTGCCTCAGTCAAGGAACTGAGGCTAGTCCAGGATGCTGGCTCAGAAAGGCAGGCGCTGACTGAACACGCTCCCACCTTTGGTTCCTGAAGGAAGGCTGAGATACTACATCTTGGCAACAACTAGCCAAGGCTTACAGTCTAGTTTCTGGGAGGCCCCATTTCCCACAAAAGGCTAACGCTTTTGTGCTGTGCTGTACTCGGAGTAGCCTACGTTAGGCGCTGGGAGAACCGGGTAACTTGGGATGAAGGATGGGGAACAGAGCTCATTCCAAAAAAACCGAGAGATAAGGAGGCCAAGATGCTGCTAGGCCTTCTCTAAGACCGCGGGGGTGCATACAAACAGCGAGACTTCGGACAAAGGCGGCCCTGAAGTAAAAGCAGGTAAGGAAAAGTCTCCTGACGGGGCCAGCCCCCTGCTCTCAAAGTCCTCTTGGGCCTCCCCCCTACCTCCCGGCACCCCTCGCGCGGAGCCCCGAAGCTGTCAACCCCCTCCAGGCTCGGGAAAGGCGTGGTTTTCCTTCCCGGTTTCTCCCTTAAGGCACAGCGGCCAGCCCAGTACCACTGCGTCTTGGCAAGGCTGGTGGTGCTCCCACCTTCACTTTAATTAGCATCTTCTTCTCAGTTTGGGGCTGCACACAGGCAAGTTGCTGCTTCTGCCGCTACGGTCGCCGATGCCTCTCCCCAGCACTCCGCCGGCAGGAATCACTTCTACTTCCGGGTCACAGCCAGGCTCCACCCCTGCCTCGCATTCCCCCTCTCCCTTCTTTCCAAGGGGTTCCGGAAAGGCTCAGGAATATTTCTGCGTTTCGTTTCGGTAGCGTAGTGAAAGAAAAAAAAGAAAGTAAAAAGGCAGCCAGCTTAGTCACAGCAGAGATGACAATTCTGAGAGTCCCCAGTGAGTTGGGGCTAGTAATAAGAGGGCACGGAACGAACTACT TCONS_00012989 . 5' 148 TCONS_00012989 . 5' 148 EMBV3_05703 CCACTGCTGCACTACAGATAGGTTCATCAGTTCCATCTTTCCAGATCCCATATCTATGTG Gene BVV0102_440855 - 1 EMBV3_42311 GK000010.2:11652283-11773686 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09417 AACTTCATTTATGGTGGGTTGTTTTTTTTTTAACTTTTTATTATAAAACACATTGCATTA Gene GeneID:513406|CCDC115:NM_001034444:16_cdna Constitutive 0 NULL GeneID:513406 2 GENE CCDC115 MGC128333 coiled-coil domain containing 115 EMBV3_23307 ATTCGGAACAGCTCGGTGTACTGAGGCTGCGGCCACCAAGGGCCGTCCAGCCGAGCTGCA Variant GeneID:511435|CD81:NM_001035099:263_cdna 652^945 1 EMBV3_26072 GeneID:511435 29 GENE CD81 MGC127931 CD81 molecule EMBV3_32935 GGCTGCCATGTCTTGGTTGGGAGCGTCCCTGAATTCCCTAATTTACACGGCAATCTTGAT Gene GeneID:514702|LOC514702:XM_002698139:522_cdna Constitutive 0 NULL GeneID:514702 25 GENE LOC514702 NULL similar to olfactory receptor, family 2, subfamily AE, member 1 EMBV3_02852 GGGCTGAACTCGGGATGATCTCATAAATGTGCGTGAGATTCACCTCCTCCCCTAACTGTT Gene BVT0101_023111 - 0 NULL GK000005.2:101659389-101686488 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19148 AGTACTATGAAGCACTGGCAGAGTGTGAGTCTGAAGATCTGGATGAGGATGAGTCTGGCC Gene GeneID:538665|MAGEL2:XM_002696471:5_cdna Constitutive 0 NULL GeneID:538665 21 GENE MAGEL2 NULL MAGE-like 2 EMBV3_04528 ACATCCTGGAGCCAAGCCCTTCAGTCCCAGGAAAGTGTTGGATCAAGAGCCGTCATTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40716 CCTAGCACAGTCCAACCCAGATACGGCTTACATTGCTGGTTTCACTTTTAAACTGGTGGC Gene GeneID:100139161|LOC100139161:XR_083761:19_cdna Constitutive 0 NULL GeneID:100139161 9 PSEUDO LOC100139161 NULL similar to T-cell lymphoma invasion and metastasis 2 EMBV3_41102 TTCATCCACACACACCCCCACTCCCAGATTAAAACAAGAACCACAGCTCCCCACAAACAG Gene GeneID:785659|LOC785659:XR_084626:189_cdna Constitutive 0 NULL GeneID:785659 1 PSEUDO LOC785659 NULL similar to seven in absentia homolog 2 EMBV3_02309 AGATCAGGTATTTGGAGCCAGTCTTGCGTATCTGTGTCAGAGGGAGAATAGCACATTGCC Gene GeneID:100336947|LOC100336947:XR_084137:104_cdna Constitutive 0 NULL GeneID:100336947 X PSEUDO LOC100336947 NULL Rho GTPase activating protein 12-like EMBV3_25540 GATGATAACATGTTTCAGATTGGGAAAATGAGGTATATCTTTAAATCCTGAACAATGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16506 AGAAGTGCAAGAAAGAGTTCTGGCTGCCAGGCAAAGCAGCACAGCTATTGTGTATCCATG Gene BVV0102_049444 + 0 NULL GK000003.2:32337250-32339826 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172900 TCONS_00172899 TCONS_00172901 TCONS_00169454 TCONS_00169453 TCONS_00172898 TCONS_00169452 TCONS_00172897 2 XLOC_104242 XLOC_103369 Coding TCONS_00169452 XLOC_103369 Coding Coding DENND2D 3:32317395-32339762 j TSS126873 4335 1 TCONS_00169452_5 291 0.139100346020761 12 0.806715550388983 0 0 3.12069151232769e-82 3.70353276198544e-71 4.84836030683081e-281 0 2.38621042872863e-104 0 1.31173272257539e-162 4.90684510738565e-05 4.75264072158237e-06 0 0 0 1.21879084263604e-91 0.00294203865147864 1.57022327998417e-30 0.00266331499595167 2.05669782038767e-67 0 0 0.000536524371698048 0.000999193129877897 0.000789963863946444 0 0 0 0.000210217866417761 1.13241297888226e-05 0.000123210216795643 XM_005204089.1 DENND2D PREDICTED: Bos taurus DENN/MADD domain containing 2D (DENND2D), 0.0 6347 99.94 0.812687427912341 NM_024901.4 DENND2D Homo sapiens DENN/MADD domain containing 2D (DENND2D), transcript 0.0 2351 77.51 0.69042675893887 TCONS_00169452_5 sp|Q9H6A0|DEN2D_HUMAN DEN2D_HUMAN DENN domain-containing protein 2D; 0.0 549 91.41 0.996563573883162 2 coding 0 0 0 0 0.0164740919135478 0.880943427287933 -0.00761204088251072 0.870839503132492 CTGAGCGGGCACTCCCCGCGCTTGCCGCGGAGGACCTCCCCAGGAGAATCTGGGAGAAGTAGTGAAGGAACCAGAAAGAGCCCTGGAGCACTGTCTACCCAACTTTGCTGGAGGGCAGCACTTCTTTGAATACCTCCTCGTGGTTTCTCTCAAAAGAAAGCACTCAGGGGAAGATTATGAGCCCAGGATCATCTACCAGTTTCCCAAGCGAGAGAACTTGCTTCGGGGTCAACAAGAGGAGGAGGACCGGCTGCTCGGAGCCATCCCCTTGTTTTGCTTCCCAGATGGGAACGAGCGGGCCCCACTCACTGAGTGTCCCAGGGAGACCTTCTCGTTCGTTCTGACCAATGTGGACGGGAGCAGGAAGATTGGATATTGCAGGCGTCTCTTGCCCGACGGCCATGGTCCTCGCCTCCCCAGGGTGTACTGCATCATCAGCTGCATCGGCTGCTTCGGCTTGTTCTCCAAGATCCTGGATGAAGTGGAAAAGAGGCATCAAATCTCCATGGCCATCATCTACCCATTCATGCAGGGCCTCCGAGAGGCAGCTTTCCCTGCTCCTGGGAAGACTGTCACCCTCAAGAGCTTCATTCCTGACTCAGGCACTGAGTTCATTTCCCTGACACGGCCCCTGGATTCCCACCTAGAGCATGTGGATTTTCGTTCTCTCATGCGTTGCCTCAGTTTTGAGCAGATTCTTCAGATCTTTGCCTCTGCAGTGCTGGAAAGAAGAATCATCTTCTTGGCAGAAGGTCTCAGCACCCTGTCTCAGTGCATCCATGCTACTGCCGCGCTGCTCTACCCCTTCAGCTGGGCCCACACCTACATACCTGTGGTCCCCGAGAGCCTGCTGGGAACTGTCTGCTGCCCCACTCCCTTCATGGTTGGAGTCCAAATGCGCTTCCGGCAGGAGGTTTTGGACAGCCCCATGGAAGAGGTCCTGTTGGTGAATCTTTGTGAAGGAACCTTCTTAATGTCAGTTGGTGATGAAAAAGACATCCTACCACCCAAGCTTCAGGATGACATCTTAGAATCTCTTAGTCAGGGCATCAAGGAGTCACAGACTTCTGAACAAATCAATGAGCATGTTTCAAGGCCTTTTGTGCAGTTCTTTGTCAAGACTGTGGGCCACTATGCTTCCTACATCAAGCGGGAGGCGAATGGGCAAGGCCGCTTCCAAGAACGGGCCTTCTATAAGGCTCTGACCTCAAAGGCCAACCGCCGGTTTGTGAAGAAATTTGTGAAGACACAGCTCTTCTCCCTTTTCATCCAGGAAGCCGAAAAGAGCAAGAACCCTCCTGCAGATTATTTCCAAAAGAAAATACGTGAATATGAGGAACAGAAGAAACAGAAGAAACCAAAGGAAAAGACTGTGAAATAAGAGCTGTGGTGAACAGGACTGCCTAGACCTATGGGCCAGTAGTGGACTTTGACCCCTGCCAGCACGGTATGATGTGAAGCTCTCAGTCAATAGAATCCACAGCCTTCTTCAGAGTCCTGGTAACCAGGTCTTGCTTCAAGTTGGTGTCTTGAGTTTGGGATTTCTGAAATCAGCTTTCTCAAGACTTTGGAAGGCTCAGACCTCTGTGCTCACAGAGCTGGGCACATAGCTGCCTTTTATGCAGAGGTGACACAGGGCAAGAAACAGTAGTAGAGGTGGTGTAGAGCCCCAGAAGTTTCTGGAACTGCCCTCTCCCAAGAAGCACTATTACAAAATCCTCTACAGAGAAACAAGTTGTCGCCCAAATGTTGTTTCTTCACATATAAACAGAGGTCTGTGGACATGTGAGGATAAGAATAAAGACAAAAATCTTGCTCTTTACATGTGTATCTCTGGCTTCCACTGTGGAGAGATAACCAGCAAAACAAGGCAAGAGATGTGAGAATAAACTGGACTAGATGCAGAGGACTGGCAACAGTGCCCAGAATTCTGGTGCTGTGTCTGGGAATGATGGGCACCAGGAGAGCCTTCTGCTAGAAGAGGTGAGGGATACTGGTAACAACAGCAGCAGTACTGAGGATACAGCAGTGGTTCTTGGTTCAAGTTAGGTGTGCTTTCCAGCATCCTGGGGCGAAAGGCTGCTAGCCTTTCATGAAATATTTGAAATTGAGAGTGACTTGACAGTAGGAATCTCAGCTGAAGAAGTCAGTGAAGAACACTACATTGTTTCCATCAATAGGTCTGTCTGGCCATCACTTCCAGTTTGGAACGTTCCGTTTTAGACATCCTACTTCCAACTTCATTATTTTGAGAAGCCAGTTCAACTCTTTGGCCAAGGGCAGAGGGATCTCCACATTGACATTTTTTTCTCTCGGAAGAAAAGAGAATCATCATCTTAAAAGTCCAAAGTTTAGTAGTCACCTGGTCCCTCTTCCCTCTGTATCTCTATTGACAGCTTCTGTTTAAATACTGTAAGGGATGGGAAACTTTTAGAAGCATCCTGTTTTTCAAAAATTCCGTCTTTTTAATGTGTGTATGTGTGGGTGGCCCTCAGAGGCCCCTGGATCCTGTACAGAGAACACAAATGTTGTTGCAGGATGGAATAGGAGACTGGGGTTACCAAATTGAAGTTCAAGTCAATATAATTTCATTTCAGGGGCACAGAGACCTGCTGCAGGGGGCACGTTCTACTGTCCACATGCCACCCCAAACTAGGCTGCTACTCTTCACAGCTTTCAAGAATTAGTGTACTTTTTTAGGTAGTTTATGCCAGTGGTTCCTAATCCTAGTTGTATCTCAGGACTGGAATCCTGGGGAGCTTATAAAAATATGAGGCTCCATCTTTAACCTACAAAATCATCATTAAAGATAGGACCTGGGAACCTATATTTTTAAAACTTCTTCAGCTGATTCTGACATCTAACCAGGTATATAATATGCTCATAAGAATCAGCACCAACTGAGGTTTACTACAAACATATCTTGATCTCATGTTGATGGTTATCTAGAGTTGAAGGAAGCACACACCAAATACCTAGATGTCTTCCAGATTTCCATTATGCTGAAAAAGATTCTAGCACCTCCGTTTGTAGCTTCAGCTCACTAAAACCTAGTATAGTGTAGAAGATAATGCTGGACCAGGATTCAGAAGATACGGATTCTAGTCTCCATTTGGAAAAGGAACAACCGTTGTGACACTGGTATGCCATTTAGCTTCTCCAAACCTCAGTTTCCACTGTAGGCAGTTAACCTCTGCTGTGTCTATCTCATAAGACAATGATGTAACCCTGCCAAATTTAATTATCCTTCCTTCTTTTTACCTTTGTCCTACCTTGTGACATCTGATCTACCCTAACATTTTCTTATATGAACTTCTCTACCCCAGATGCTACAGAAGTTGGTAGCAAGCAAATATAGTGAAAACTTCCCTTTCCTGCTACATTCTAGCAAAGAAATGAAAGGTTTCACTACCACTGGTAATCAAGATTACATGGAATTGATGGAATCATTAGAAGTGCAAGAAAGAGTTCTGGCTGCCAGGCAAAGCAGCACAGCTATTGTGTATCCATGATTATGGAAATGGAAATAAATGGAAATAAATAAGAATCAATAGTAAGATACCTCATTTTAGTCAAAAGTTTAAACGTTTGCTGTTTGCCTCTTCATTCAAGCAATAGAACTATACACAATAGAAACAGATCTGGTTTATAGTTACTGAGGACACCTATTTTTTTGTTTCAAACTTGTAGCCAGAAAAGGAGAGTGCAAATATTCAACAATTGCCAAGAGAGGCACAAGCCTCTTATTTTAAATCTGGGGGAAGGGCTTGAGATTCTGAGAGCTACTAACCAGTCAATCCTAAAGGAAACCTGAATTTTCATTGGAAGGACTGATGCTGAAGCTCTAATAGCTTGGCCATGTGATGCAAAGAGCTGACTCATTGGAAAAGACCCTAATGCTGGGAAAGACTGAAGGCAGGAGGAAAAGATGACAGAGAGTGAGATGGTTGGATGGTATCACCAACTCAATGGACATGAGTCTGAGCAAACTTCAGGAGACAGTGAAGGACAGGAAAGCCTGGTGTGCTGCAGTCCATGGGGTCACAGAGTCAGACATGACTTAGCAGCTGAGGAACAACAACAAACACCTACTAAACTCCTCTGGACTTTTAAGATTATGGTTCTCTTTTTAAAAAGGGAAAAAATGACTTATAATCTCAAGGGTGACAACTATCACAACAACAAAAAACCTTCCAAGAGGGAAAATGAACATAGCACTCCCATGTTTTAAGTTAATCAGTTTTATATAAAATAGAAAGGTCACAGGACACATGTTGACGATGTAGCTGACTTAATTTCCTTATTTACTAAAGAACAAAAATAAATTTTGCTTAA EMBV3_01738 TTCCCTGACCCGGGAGGTCAGCATGGTTCCTCCAAACGAAAGTGTGAATGTGTCACGTGA Gene BVT0102_334250 + 0 NULL GK000006.2:107285340-107286701 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39299 TCGCCTTCCCTCCGTGCATGTATTTATCTCATGCTCACCTACTATCCCAGGTTCTCTTGG Gene GeneID:510719|TXNL4B:NM_001014897:186_cdna Constitutive 3 NULL GeneID:510719 18 GENE TXNL4B NULL thioredoxin-like 4B EMBV3_37627 TCGGAGTAGCACTGTTATTTGGAGGAGTTGATGAAAAAGGACCCCAGCTGTTTCACATGG Gene GeneID:510155|PSMA5:NM_001015566:74_cdna Constitutive 0 NULL GeneID:510155 3 GENE PSMA5 NULL proteasome (prosome, macropain) subunit, alpha type, 5 EMBV3_14882 AAGATCAATGAGGACTGGCTGTGTAATAAGGAGGCAGCCCAGCTGCTACAGATCCTGCAG Variant GeneID:505749|RBM10:XM_002700061:29_cdna 433^828 3 EMBV3_18225 GeneID:505749 X GENE RBM10 NULL RNA binding motif protein 10 EMBV3_03119 GATACAACTCTTTACAGAAGGGAACAGAAAAACAAAAGCAAGACCTTGTGAGTGAAACAC Gene GeneID:525772|PLEKHG1:XM_002690335:1_cdna Constitutive 2 NULL GeneID:525772 9 GENE PLEKHG1 NULL pleckstrin homology domain containing, family G (with RhoGef domain) member 1 EMBV3_21113 TCGCTTCCAGTGACACCTCTTCCTCTACCTCAGCTCCCTCCAAACCAGGCGCAGCCAAGA Variant GeneID:527400|H1FOO:NM_001035372:128_cdna 47^544 3 EMBV3_01755 GeneID:527400 22 GENE H1FOO NULL H1 histone family, member O, oocyte-specific EMBV3_02797 CCATTTAACTGCCTCCAGTCGCCTGCCTTCTTCAGCCATCTCTCCTCAGTTGGCTCATTT Gene GeneID:281485|SELL:NM_174182:73_cdna Constitutive 0 NULL GeneID:281485 16 GENE SELL NULL selectin L EMBV3_11256 CCAAACGAGTTCTCTGTTATATCCTTATAGTCAACGGCAGGTTATATTCATCCAGAACCT Gene GeneID:508782|C22H3ORF64:NM_001077882:20_cdna Constitutive 2 NULL GeneID:508782 22 GENE C22H3ORF64 MGC143280 chromosome 3 open reading frame 64 ortholog EMBV3_43682 ACATGTTGGCAGCAAATGGAGAGAGTAGTCTGGAAGGATTTGAGCTCCACGGGGAAGGTG Gene BVV0102_047623 + 1 EMBV3_00894 GK000006.2:27080768-27206778 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40519 TCACACAACAGTCCGTTACCAGCCAAGGTCTCCGACTACTTCTATACGTTCAGCTTCAGC Gene GeneID:100297610|LOC100297610:XM_002699071:99_cdna Constitutive 0 NULL GeneID:100297610 29 GENE LOC100297610 NULL similar to CG10465 EMBV3_19500 GTCCTAGACCCTGATATTCCTGACAATTTCAGTAGCTTAAAGGACTGTGAACCCAGCTCT Gene BVT0102_123772 - 1 EMBV3_00416 GK000003.2:78730913-78736777 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42175 TGGCGGCGGCCGGGGCCGAGGCGCCAGGAGGATATGGAATATTATCTTGTAAAATGGAAA Variant GeneID:536936|SUV39H2:NM_001037479:133_cdna 55^200 1 EMBV3_34606 GeneID:536936 13 GENE SUV39H2 MGC128675 suppressor of variegation 3-9 homolog 2 (Drosophila) EMBV3_11098 AAGAAATGTGAGCAGCTGGACGTCTTTCCAACCCTAGATGCCTACCATCCTATGAGCGAG Gene GeneID:281333|MUC1:NM_174115:25_cdna Constitutive 0 NULL GeneID:281333 3 GENE MUC1 NULL mucin 1, cell surface associated EMBV3_13648 TTGTAGATGAAGGAATTAAGACATTAGAAGGTGCAGAGTCCAGTGGTGACATGGATGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01682 CTCAAGCTGTAGCATGTGCAAAGAAGATTGTCAGTCAGCAAGGCCTTACAGCATGGGTGG Gene GeneID:617219|LOC617219:XM_002687390:83_cdna Constitutive 0 NULL GeneID:617219 5 GENE LOC617219 NULL similar to lysozyme EMBV3_02733 GCTCCCAGAGCTGCTGCGGCGGGCGGCCGAGCGCCTCGGGGTACACCCCACCAAGAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12405 ACTCCTGGAATAGAGGAAAGATCCAAAACGGCTCACACAACCAGAGAGGGGGTGTCCCAT Gene BVV0101_006950 + 0 NULL GK000020.2:57145664-57300022 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22829 TATCTCCTCACCGTCGCCCTTCTTGACCTTCAACATTGGATACCTCCTCTAGGTCCTCCT Gene BVT0102_179581 - 1 EMBV3_02035 GK000002.2:75995495-76541397 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186078 1 XLOC_112131 NonCoding TCONS_00186078 XLOC_112131 NonCoding NonCoding - 4:14677153-14677413 - TSS138446 260 1 TCONS_00186078_1 35 0.996153846153846 1 0 0 0.000154591300226724 0.00142131908226542 0 2.7127384259144e-06 0 0 0 0 0 0 0 0 0 0 0 7.29769564955231e-05 0 0 0 4.02169161372688e-05 0 0 0 0 2.70979316474149e-06 0 0 0 0 XR_238496.1 ZNF845 PREDICTED: Bos taurus zinc finger protein 845 (ZNF845), transcript 6e-47 190 78.15 0.907692307692308 0 noncoding AGGTCGGGGGCGGTGACGAGAGGAGTTACCCAGCGTCCGAGGTCAGGGCCGGCGGCCGGGAGGAGCTACCCCATGCCCCCACGCCCGAGGCCAGGGGCGGTGGCTGGGAGGACCAACCCCACGTCCAAGGAGCCTGACTGCAGGGGCGCAGGAGGGCCTAGAGGAGCTATCCCATGTTGAAGGTCAAGAAGGGCAGCGGTGAGGAGATACCCCTCGTCCAAGGTAAGGAGCAGCGGCTGCACTTTGCTGGAGCAGCTGTG TCONS_00180882 TCONS_00180883 TCONS_00180885 TCONS_00180886 . 3' 223570 TCONS_00180882 TCONS_00180883 TCONS_00180885 TCONS_00180886 . 3' 223829 EMBV3_29730 AATGGGCCCTTCCTTGCCCTGTAGTGTTTTCTCCATAGAGCAGCTAGGATGAACTAATTG Gene BVV0102_296656 + 0 NULL GK000014.2:58850959-59100800 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052014 TCONS_00052016 TCONS_00052015 1 XLOC_031349 NonCoding TCONS_00052014 XLOC_031349 NonCoding NonCoding - 14:58961257-58965486 - TSS38673 1381 2 TCONS_00052014_3 70 0.681390296886314 3 0.674077578051088 0.000433449849026457 5.08269992778846e-05 2.26732696736766e-05 0.000408801839793161 0.000361028529694149 5.17680272553471e-05 7.58989242446764e-08 8.62423311815874e-09 2.74691272730554e-06 0 0 1.2906470155514e-05 8.72326828410257e-05 0.000219652016306335 3.1928644437969e-05 0 0 0 4.9127593463188e-08 0.00107494841604062 0.00043081638908534 0 0 0 2.5506099468437e-05 4.58390111255124e-05 0.000183221327228765 0 0 0 XR_229125.1 LOC101906900 PREDICTED: Bos taurus uncharacterized LOC101906900 (LOC101906900), 7e-43 179 84.75 0.125271542360608 0 noncoding GTGGTCTGGAGTAATGTGTTTACAGTCATTTTCTGAGAAGTGTCTGCTGAAGTGGAAAAAGTGGGAGAATCAAAAAATATGCTTCTAAGGGAAATCTGGATGAATATATACAAAGAAGGAAGCTGATATGAAGGCAACTACATGATGGCGAAGATGGGACAGACGAAACTGCAAGCCAAGTAATGCCAAAGAACTGCCTACCACCAGCAACTAGAAAGAAGCAAGTAAGGATTCTACGCAGAGTCTCAGATGGAGCATAGCTCTGCTGACACATGGATTTTATATTTCCAGCCTGTAGATTTGTAAAATAATACATTTCTGCTTGTTCTAAGCCACCTAGTTTGTGATACTTTGTTACAGTCACTCAGTGTTAGTCACTCAGCTGTGTTCAACTCTTTGTAACCCCATGGACTGTAGCCTGCCAGGTTCCTCTGTCCATGGATTCTCCAGGCAAGAATATTGGAGTGGGTTGCCATTTCCTTCTTTCGGGGGATATTCTCGACTCATGGATCTGATCAGGTCTCCCACCTTGTGGGCAGAAGCCATACTTTGTTTTAGTAACCCTAGCCAAATAATATAAAATCCACTCACTACCTGTCATGAAAATTTTTCCTTGAGAAAGACATCTGGAAGAATGGGTTAATAATAGAGAATGTAATACTCTGCTTATTAATATGTAGCCCTTCGATATATTTTTAGATGCTTTTAAATGTGAATTTCTGTTATTAATACAAAAGCTATGCATGTTCACTAAAGAAAATGTTCAAAATAGTGACAGGTGGTCTGAATGGGTCCTTCCTTGCCCTGTAGTGTTTTCTCCATAGAGCAGCTAGGATGAACTAATTGAAATATTGATCTTGCCTCTTCTCTCATTAAAACCCTTCAATGACTTTTTCATCTCACTCAGAGCAAATCTATAGAATTTAAGTGACTTATAATCCATATAAATCATTACAGTAATTATTCTCAATAAACTGGGAGCATTTGAAAACTGCTGTTGTCTGAGTTCCTTCTTAAATTCAAACAGATCTCTGAGGGTGTGGACTGGGCATGGGTATTTTGAAAGTCTCTCTTGGTGATTCTGAAGTAAGATAAAGAACCACTACCTGTCACAGTTTCTCCTACCCACTCCTAAAACCCTTATTTTTTCTCCTGTTATTTCTTCGACCTCATGTCCTACTACCTTCATCCTGGCTGCACTGGCCTCCTTGCTGTACCTTATAATCCTCAAGCATGCTCTCACTTGCTCTTTGTTCTGTCGCTGCACCATCAGGTATTCATTTACATGACTGGCTTCTTCACTTCATTCAGGTCTTTGCTCAAAGGAAACTTTACCAGTGAAGCCTTTTCTGACCCCTTTAAAAAATACTCTCCACATTCC TCONS_00052017 TCONS_00052018 TCONS_00052019 TCONS_00052020 s 5' 1199 TCONS_00052017 TCONS_00052018 TCONS_00052019 TCONS_00052020 s 5' 5427 EMBV3_43100 GACTCCATATTTCCAATGCAGGGTGTTTGGGTTTGATTTCTGGTTGGGGAGCTAAGATCC Gene BVV0101_033219 + 1 EMBV3_04456 GK000016.2:48314478-49210970 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39843 CTTAAGAACTCAGAGGGCGGAAAGAGTCCATGGTCTTGGCTCCAGAGTACGGAAGCTATA Gene GeneID:100137734|PILRA:XM_002698210:778_cdna UTR3_Alt 2 NULL GeneID:100137734 25 GENE PILRA NULL paired immunoglobin-like type 2 receptor alpha EMBV3_38684 CCAAACGTGTGAAATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGTAAGGGGTGTGGT Gene GeneID:516328|USP1:NM_001046224:60_cdna Constitutive 1 NULL GeneID:516328 3 GENE USP1 MGC137005 ubiquitin specific peptidase 1 EMBV3_19385 CGTCTTAAGAAGGAACAGTATACGGTACTCCTCACCCGGGAATGGAAGTCACGTGAGTGT Gene BVV0102_057050 - 1 EMBV3_14873 GK000022.2:15708181-15860350 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126224 TCONS_00126225 TCONS_00126228 TCONS_00126226 TCONS_00126223 TCONS_00126229 TCONS_00126227 1 XLOC_077397 Coding TCONS_00126225 XLOC_077397 Coding Coding SNRK 22:15783917-15878777 j TSS94744 875 1 TCONS_00126225_2 181 6 0.990839034777934 0.00445055730564942 0.00245199345447731 0.00318106051507477 0.00458237141010389 0.00495340363175463 0.000603684791702669 0.00294711726593065 0.00106033217018214 0.00319094212347512 5.92481254015662e-05 0.000316903661723509 0.000275800854601313 0.00184151510178542 0.00126519440998072 0.000220020128730009 9.6803476912552e-133 7.79915031545161e-159 1.69589807956954e-55 0.00243501951189719 8.13384450385396e-21 0.00274180247605066 3.28708915535356e-226 9.45089841646206e-80 2.03214962697258e-107 8.1768155668586e-10 0.00118976914744786 0.00416927944182382 0.000258329096953326 2.30169087507414e-59 1.85458933508583e-113 XM_002696930.2 SNRK PREDICTED: Bos taurus SNF related kinase (SNRK), partial mRNA. 0.0 1180 100.00 0.746285714285714 XM_005265245.1 SNRK PREDICTED: Homo sapiens SNF related kinase (SNRK), transcript 0.0 673 91.54 0.539428571428571 TCONS_00126225_2 sp|Q9NRH2|SNRK_HUMAN SNRK_HUMAN SNF-related serine/threonine-protein kinase; 2e-108 331 100.00 0.861878453038674 2 coding 1 0 1 1 -0.040311935705413 0.697956571227741 -0.00562447684635249 0.930624309290764 AAAGGCGCGCGCGCGTGTGCGTGTGCGCACACTCACGTGACTTCCATTCCCGGGTGAGGAGTACCGTATACTGTTCCTTCTTAAGACGGCTGCCTCCCAGTCCGGTCCTGCAGCACTCCAGCTTCCCAAGAAACACTGGAGATGAATAAATGATTCACCACGTGGCCAGGACTGCAGCCCTTTCTCTGGAAGAGAATTCAAGCCCACTTTATTTAAACCAAGGAAAAAGAAGCGATTAACAAAACACAGTGATAACAAGGATTACTCCACATGCAATTTGCAGGATGTCCATGACGATATTGAAAATGAATTCCTTATTTTCACCAGATATATGAGAAGATCCATTTTAAACAGTCTAAATATTTTTTCTCACGTCGGACCAGCATGGCAGGATTCAAGCGAGGGTGAAAAAGTGGCAGTAAAAGTTATTGACAAGACAAAATTGGACACACTAGCCACTGGCCATCTTTTCCAAGAGGTGAGATGCATGAAGCTCGTGCAGCACCCCAACATCGTGCGCCTTTACGAAGTGATCGACACCCAGACCAAACTTTATCTTATCCTGGAACTCGGGGATGGAGGAGACATGTTCGATTACATAATGAAGCATGAGGAGGGACTCAATGAAGACTTGGCCAAGAAGTACTTTGCTCAGATAGTTCACGCCATATCTTATTGCCATAAACTCCATGTGGTTCACAGAGACTTAAAACCTGAGAATGTGGTCTTCTTTGAAAAGCAAGGTCTTGTAAAGCTGACAGACTTTGGTTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACGAGCTGTGGCTCTCTTGCATATTCTGCCCCAGAAATTCTGCTTGGTGACGAGTACGATGCACCCGCAG EMBV3_10725 GAGCTAGATACGAGTGTCCTACTTCTCCTTTCCATGAGGCCCCACCCATCTTGCCAAAGT Gene GeneID:617882|EPHX3:XM_002688562:221_cdna Constitutive 0 NULL GeneID:617882 7 GENE EPHX3 ABHD9 epoxide hydrolase 3 EMBV3_40535 GCCACCCGTTTTTCCTTGAGGCCTAGATTTTTGTATTCCGTCCTGAGCAAAGGTCACTCC Gene GeneID:511769|ABCC5:NM_001077907:16_cdna Constitutive 0 NULL GeneID:511769 1 GENE ABCC5 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 5 EMBV3_23740 ATATCAATTTTGAATTTTTAATGGTGTTTATGAAATTTTAGATAGCAGTGAGTGTTTGAT Gene GeneID:613828|DR1:NM_001046519:192_cdna Constitutive 2 NULL GeneID:613828 3 GENE DR1 MGC128978 down-regulator of transcription 1, TBP-binding (negative cofactor 2) EMBV3_08497 AGGTCTTCCCCACGGCCGCGCTCATGCCAGTGCCTGGTGTTCGAAGACGCGCCCAACGGG Variant GeneID:617253|HDHD1A:NM_001046595:17_cdna 311^540 1 EMBV3_37243 GeneID:617253 X GENE HDHD1A MGC128764 haloacid dehalogenase-like hydrolase domain containing 1A EMBV3_28446 CCCTCACAGGGCACATATCCTGGAAAAAGAAGACAATAAGACGGAGAAAAGGAGGGAACT Gene BVV0102_091229 + 1 EMBV3_38106 GK000023.2:32763529-32775582 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34477 TCCTTGAAATTCTACCTAGATCCTCAGAGAAGGCTCCCTTGCCCCTGTGTTCCTCCCAGG Gene GeneID:528492|MPL:XM_002686439:432_cdna Constitutive 0 NULL GeneID:528492 3 GENE MPL NULL myeloproliferative leukemia virus oncogene EMBV3_19998 TAACTTGGGCGCTGAGAGAAAGGACAGCTGCATCAGGTGGGTCTGGGGACAGGAATATTT Gene BVT0102_231489 + 1 EMBV3_26186 GK000006.2:14419295-14425501 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18141 CATTCTGGATATGCTCTTGCACACCCTGCTGATGGCTCGACTCTCCTTCTGTGCAGACAA Gene GeneID:539468|LOC539468:XM_002697876:420_cdna Constitutive 0 NULL GeneID:539468 25 GENE LOC539468 NULL similar to olfactory receptor, family 1, subfamily F, member 1 EMBV3_24534 AGGTGATGCCCTCTCCGCTCTCTGGGGCTAACGCAGCTCCACCGTGACTGCCCTGACTTT Gene BVV0102_180576 + 1 EMBV3_11712 GK000019.2:14946572-14950017 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10752 GCCTCATTGGCAACCTGGGTGCTTTCATGGGTGGACCACGCTAAGTCTCTGCACTATGTC Variant GeneID:515742|TMEM150A:XM_002691366:221_cdna 452^579 7 EMBV3_22087 GeneID:515742 11 GENE TMEM150A TMEM150 transmembrane protein 150A EMBV3_15969 GAGCTGCTGTCCGGAGCTGCTACCATGTCGGGGAAATTTGAGATTGTGAACATGGACATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37425 TCTCTCTGGAAGCGGCAAGAGGAACCAGTAGGCTGTGGGAAAGGAGTGAGCACATTTGAC Gene GeneID:511010|PTPN3:XM_002689912:25_cdna Constitutive 2 NULL GeneID:511010 8 GENE PTPN3 NULL protein tyrosine phosphatase, non-receptor type 3 EMBV3_32557 GCATGCAACCCCTTAGCCATGTTGACTTATGACATTGTGTGGTCACTGTTAGGGTAGGTG Gene BVT0102_192333 + 1 EMBV3_02817 GK000019.2:13194554-13202621 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18869 GCCTAGGGCGCGGGCCCGGGTGGAGCCGCCGCAGGTCTCCAAGGTGAACAGCCTCTGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06910 ACGGCTTTGTGGATCAGGATGAGTATATTGGATGAAAAGCTCACTAAAGAGGAGATCTTA Variant GeneID:281445|RCN1:NM_001103221:5_cdna 435^634 1 EMBV3_34908 GeneID:281445 15 GENE RCN1 MGC140230 reticulocalbin 1, EF-hand calcium binding domain EMBV3_31756 ACCAAAGAAAGATAAAGCAAGGCAAGAAAAATGTGACAAGCCGAGGCGGTGAGCCGGGCT Variant GeneID:281572|VEGFA:NM_174216:201_cdna 571^702 1 EMBV3_16640 GeneID:281572 23 GENE VEGFA VEGF vascular endothelial growth factor A EMBV3_15666 GCCTTCTCCTCCAAACTGTATACATTGGCTTGGAATGTTCACAACCTGCGTGTGTGGCAG Gene GeneID:613858|YTHDC1:NM_001046520:44_cdna Constitutive 0 NULL GeneID:613858 6 GENE YTHDC1 MGC137509 YTH domain containing 1 EMBV3_31942 TCCGAGATCATGTTGCATCACTGTTTTGCATCTCTGTTGGCCCGAGGCTCCAAAGGTGAA Gene GeneID:512288|KCNJ13:XM_002686493:591_cdna Constitutive 0 NULL GeneID:512288 3 GENE KCNJ13 NULL potassium inwardly-rectifying channel, subfamily J, member 13 EMBV3_24164 TTTTCTGTCCCTTGCCTCAGATCCAGGAGTGTCCAATGACTTCCTACTGACCCTCACCGA Gene BVV0102_111729 - 1 EMBV3_21609 GK000013.2:56874837-57056585 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045679 TCONS_00045681 TCONS_00045678 TCONS_00045680 TCONS_00045682 1 XLOC_026502 Coding TCONS_00045680 XLOC_026502 Coding Coding CDH26 13:57053912-57103067 j TSS33282 5249 1 TCONS_00045680_5 652 0.195846827967232 16 0.893538674370346 3.92145898463338e-09 3.02163994119475e-11 4.44607007181066e-06 2.66653842717115e-05 3.10822856491435e-05 2.13790150055727e-15 4.41340287034767e-06 7.41489243675697e-06 1.4294035473248e-19 5.14189020540816e-07 1.66300055036594e-05 3.38184146053195e-06 1.15503065079993e-14 1.80907600837138e-11 1.08139547792805e-06 0.00122152227095615 0.000198901561616959 0.000144837029515721 1.56361045078796e-14 6.0010969867981e-06 1.67509029753206e-16 0.000212834279757661 0.00039202870483828 0.000213562175955833 2.04368839299361e-05 6.0996552053788e-05 1.07131472837807e-11 8.37257404930338e-05 9.7747347134912e-05 0.0005700386630835 XM_005194397.1 CDH26 PREDICTED: Bos taurus cadherin 26 (CDH26), transcript variant X1, 0.0 3530 100.00 0.372642408077729 NM_177980.2 CDH26 Homo sapiens cadherin 26 (CDH26), transcript variant a, mRNA. 0.0 1494 77.71 0.358544484663745 TCONS_00045680_5 sp|Q8IXH8|CAD26_HUMAN CAD26_HUMAN Cadherin-like protein 26; 0.0 899 71.64 0.921779141104294 1 coding 0 0 1 1 0.0588222697556163 0.606898069209308 0.0050183743986609 0.92172380894955 GAGCCTGCTGGGAGAGAAGGGCCCAAGCCGGGAGGACTCGCATCGCCCGCAGGCTGCGGGTGCGCACCAGGCAGCATGTGCTCCAGGGTTCACCCCGAGCTGCTGCTGCTTCTCTCGCTGCTGATGCTGGTCAGCACTGTCAACAGTACCCGACAAGAAAACGATGATCTTACTAATCAAACAAAGGGAGACAGCCGGCTTCTACGGCGATCCAAGAGAAGATGGGTTATTACCACGTTGGAGCTGGAAGAGGAAGACCCGGGACCCTTCCCGAAATTTGTGGGTGAGCTGTTCAATAATATGTCCGCTAACATGGAAATAATATATTTAATCAGAGGACCTGGTGTGGATGAATATCCAGAGATTGGTTTGTTTTCTATAGAAGATAATGTGAATGGGAAAATATATGTTCACCGCCCTGTTGATCGAGAGAAAACACCGTCTTTTAAGGTTTATTTTGATGTTGCCAATCGCTTAACAGGACACATCGTAGATAAATCCTTGATTGTCAACATAAGGATCAAGGATGTGAATGATCATGCTCCTGAGTTCCCTGAGAAGGAATTTAACATCAGTGTGAAGGAGGACCACGCTGCAGGTCAACCTGTTTTTCAGATGTCAGCAGTGGATCTGGATCAAGAAAATACTCCAAACTCTCAAGTGCTTTACTTCCTTGTTTCTCAAACACCCGTACTGAGAGAGAGTGGTTTCCGGATTGACCGTGTTAGTGGAGAAGTGCGACTGTCAGGATGCTTAGATTATGAGATGGCGCCTCGGTTTACACTACTCATTGAAGCGAGGGATTGTGGCAACCCGCCGCTGTCATCCACAGCCACTGTTCATGTACACGTGCAAGACAGCAACAACCACATGCCCAGGTTCACCCAGGACCACTATAACGTTCAGATTTCAGAAGGCTGGGCCAGCCAGGGTGTGTTACGTCTCGGGGTTCAAGATGGTGATTCACCATCTACAGCAGCGTGGAGAGTGAAGTTCAACATAACGAATGGCAACGAAGAGGGACATTTTCACATTTCAACAGATCCTGAGACCAATGAAGGGATTTTAAATATTATCAAGCCTTTGGACCATGAGACTCAGGCAGAGTGGAACTTGGTCGTGGCTGTGGAGAACGAAGAGCCACTCTTCTCGTGTGATGCGGGGCAGCTGCAGAGGCCCCGGCAGGCCTCGGCCAGCGCCACCGTGAGTGTGTGGGTGACCAATGTCAACGACCCGCCCACCTTCCACCCGGGGACCTTCATCGTCAGTGAGGTCGATGGCGCAGGGCCGGGGACTCAGCTGGGAATGTTCAACGCTACAGATCCAGATAGAACCGCCGCCGGCCAGATAAGATACAAACTGGCTTATGATCCTGCAAACTGGGTCAGCATAGATGAGCGCTCTGGGGTGGTCATCACTGTGAAGCCGGTTGACCGCGAATCTCCTCATGTCAATGACAGCATTTACGTAATCATCGCTCATGCTGTTGATGATGGTGTCCCTCCGCAGACGGGAACCGGGACCATGCTGCTCTTCCTGTCAGACGTCAACGACAACGCTCCCACACTCCGCCTGAGCTCTCAGCACCTGGAGGTCTGTCAGTCTGCGGGAGATAAGTCCCTCCTCATTGAGGCGGAGGACAGCGACCTAGAGCCCTACTCCGACCCGTTCACCTTCAAACTGGACAGCACGTGGGGAGACACAGAAGACATGTGGAGACTGGGGGAAAACAGGGGTTGTTCAGTGGAACTTCTAATGCAGAGAAGCCTTCCACTTGGTGACTACTCTGTGCCGCTTCTCATCGGAGACAAACAGGGACTTTCCCAGAAGCAGACTGTCCACGTGAGGGTCTGCTCCTGTCCCGATGGATTCACCTGTGCGGAGCCCCTCATCGCGAGAGCTGGGGTCATGAAGGGCGCCCTGGCCCCTCTCTGTGTAGCATTCATGGCTCTGGCAGGGAAGGTCATACCTCGGGGATCACATGCCAGCCCTGTCCATCAGCGCAGCCCAGGCGGGCGCCAAGCTGGGAGCTAAGGGTCATGGTGTGTTTTTTGAACCAAGTGTGAGAAACAAATACTCTACTCCTGTTTGCCTCAATACCGTGGTGCCCAGAGGACCCCTGGAAATGAGAGCAGGAGTGATGGCAAAGGTGCTGAGTCAGCAGCTCTGTGGCACCCGTGACCCTGAGGGTGATCCTGGCTACCCACCTCATGTCTACGCAGAGGAGGGCGAGTGTGAGCAAGCAGACAGCCTCAGCTCTCTCACCTTCTCTGAACATGACCTACCACCCGACGTGCTGGACTCTTTGGGGCCAAAGGCTGCTCCACTAGAAGAAATATATTCTCAGTCAGCCTTTCGTTCCTAAAAAATGCATATTTTGGTGAATTGGAATAATTCACAAGGGGAAATCACTATTCTAGAATGCCTTTTTCCTTTTGTTTTTTAAAAATTACCTTCTAGTTTTTTTTTTTAATTTCTTCTAAGTCCTTGTTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGAGTTTCATCTACTAAAAAAAAAAAAATATTACCTTCTAGTTCTAACAGAATGAGGGTAAACTGAGTCTGGATTAAATGATTCGACATTCTGGGACCTCTTGAACCAAAACAAAACAGCAGGTCATACTTTTTAAAAAATTTGTCAGGCATATTTTCTAGAGAAATTTGAATTTAATTGTGTAATTCCTTGCTTCCATGAGCAGCCCAACTCCGAGACTAAATGAAATATAATCCACAGATTACCCCAATTATTTGAGAACAACAGATAATGCTGGGGAAAACAACAGGTAAAACTGGGAAAAGATTTTTAAGTGCTTACTTAAATTTCTTTATTATGGTTCTGCTTCAGTTTAAGTGAAAAACAATAGGGTAATATTTTGTAGAATATTTGCAATTAGTATTTTTAGTGATTTTTAAAAATATATTAGTCCCATTGCACTTTTTGAGTAGATAAATAGATAAAATTTATTACCATAAGAGAAATAATTAAAACTTAAAACTTTATGAGTGGTAAATATTTAAAAAAACTGACATAATTTAACTTGCATATACTATGTAAATATATTAAAATAACTTAGGAGCCTTTGAGTGACTCAATTCTGATTAAATTCTATTTTTATACAACATCACAAACTTTAATTGATTTTTACATGTCCACTTATCACTAGTGTAAACTGTGGGGGAGGTGATAGTGTCCTTTATCTAAAAAAAAAAAAAAAGTAAATAGTAGGACATGTGTCTTGTATAGACTGTTTTCTTGGCTGTGTAATATATAAGAAACTGGTTAAGCAAAATTTTAAAAGATACCAGGGCACTTTAATGTATATATTAGATATCTAAAAGCCTATGGCAAATTCTAAAAAACATTATATAATTAATGAGCATACTCTTTTGTGCACATCCTCCTGAATTCGAGTCCAACTCTTTGTGATCCTATGAACTGTAACCCACCAGGCTCCTCTGTCCATGGGATTTCCCAGGCAAGAATACTGGCATGGGTTTCCATGACTTCTTCCAGGGGATCTTCCTGAGCCAGAGATCAAACCTGTGTCTCTTACATCTCCAGCACTGGCTGGCAAGTTCTTTAACACTAGTGCCACCTGGGAAGCCCCAAGTTTTAGCTGATGCAGAGTTAAAACTTTTCTTTCTAAAGAAGCTGTGGAAATACTGAAAGAGATCACAAGAATTAGTACATAGTCATTTCATGTGTCACCTAGTGCATTGGGTAACTGAAAAAGAAGAAAACCATCTCCAAAGGATTGGAAAGTCTAAAACTGGCTCACAGTTGTGTAGAATAGCTGTGCTAATTCTGGAATGATTCTGAGGAGAGCCTACGATGTTTTCTGGGGAATTCAGGATTCCCATCTTAGTCCTATCTTAGAACGGTATACTTCTTGAGTCTGAATGATTGGTGAGGGTCAGTAGGAAGTCATTGGACACTCCTGGATCTGAGGCAAGGGACAGAAAACTATGGCCATGGGGAACATCTGGCCCACCATCTGTTTTTGTAAATAAAGCTTTATTGGTACACAGCTGTGCTCATATGTTATTTAAGGGCCATCCATGACCACTTTGTGCTTCCATAGCAGTGCTGAGTAATCATGATGAAGATATATGGCTCACAAAGCCCAACACATTTACTTCCTGGCCTTTTAAAGAAAACAAGAACACTGATCCCCTTGTCTAAGGCATTCTTTTTAGGAACTCCGCATCTTATCTAATATTTAAATATATCCATAAAAACTTAAAAGTGAAAGTGTTAGTTGCTCAGTCGCATCCAACTCTTTGCAACCCCATGGACTGTAATCTGCCAGGCTCCTCTGTCCATAGAATTCTCCAGGCAAGAATATTGGAGTGGGCGACCCTTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCGGGTCTCTTGCATTGCAGGAAGATTCTTTACCTCCTGAGCCATCAGTGAAGCCCAAATATATCTATACTCTGTGTTAAAGTCAAATACATTGCCGTACAACTCTGATAGGTTTTCGATAAGTTTGCTTTTGGCTGTAGGTAACTTGATTCCTTTACTAATGGTTATGAAATCTTGGCAGTTGTGCCTATTAGTGCATTCTTACATTATGAGGCTCTCTCCCACTAATTGTTCTCAAAAGTAGTAAAATACTCATGAAAAATTCAAGAACGTGGAATTGAACAATTAGCAAGAACAAAATGTTATATTTTGTAGATATTTAATTAGACATTTATTAATTTTGATTTTGCTGTTTTCTTTGTGTATTCTGAAGCCTGTATATATGTTTTTGTAGGTCTTGAGCCTTTGGGGTATATTGTCCAGTGGAGACACTGGCCCTGTTGGCATGTTTATGAAGCCCACCTGGTATAATGCTTTGACTTTCCCCTTTAGATTCCAGTCTATGTTGTATATTATCACCTGCCCCAACTGACGTCTGCAGGGAGCATTCTTGAATATTGGCTGGTTCTCCCCATAGGTTGATTCCCAGGTCTATCTCCATGCTTTAAAAGGTTTCCATTAGAAACAGCCTCACCAGGAAGTTTTGGGAAAAAAAATGTTAGCCTCCAGTGGAATTTATGTACACTCGTGAATGAAACCAAGTCTTACTAATGGCAATGAAGAAGGCAATAAAACAGAAATAGTAAATATTTTCCTAGAAAATGTGATTTTTTTTAAGAACATTAGCCTCCAAATTACTTAGCAATCCAAAGATAGC EMBV3_11965 CTCAGTGAGATGTATGAACACCCAGACTCTCCTGGACCCTAAGCCCTTCTCTTTGTCTTT Gene BVT0101_067813 + 0 NULL GK000001.2:155283663-155383444 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29497 ACAGCACTTCGGAAAGCTTCAAGGAAAAGTTTATTCGCAAGACCCGCGAGAACCCATTGG Gene GeneID:506420|HIGD2A:NM_001077861:84_cdna Constitutive 0 NULL GeneID:506420 7 GENE HIGD2A MGC137045 HIG1 hypoxia inducible domain family, member 2A EMBV3_36341 TGAATCTAGTGGAAACACTTCTGCACAGGCTAGATTATGGATACCAGTGTGCGGAAATGC Gene GeneID:100313003|MIR147:NR_031034:2_cdna Constitutive 0 NULL GeneID:100313003 10 GENE MIR147 bta-mir-147 microRNA mir-147 EMBV3_14191 GCAAGGTCACTTTCAAACCAGTTCATATTTCTGAGGAAAGGCCAAGACTGAGCCAGCCTG Gene BVT0102_129416 + 0 NULL GK000010.2:73927125-74095728 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014722 1 XLOC_008346 NonCoding TCONS_00014722 XLOC_008346 NonCoding NonCoding - 10:73944078-73948802 - TSS10543 2845 1 TCONS_00014722_3 113 0.293848857644991 3 0.398263815371586 0.00241200220995603 0.00339185569033556 0.00355599221481233 0.00248783726871073 0.00168391071406066 0.00120987236041762 0.000990741691536391 0.000892117486786801 0.000909191157977608 1.44621912700856e-06 0 0 4.53841010460375e-06 1.65342865277217e-06 0 0 0 0 0.00285196053045677 0.00290518255294352 0.000729855890424101 0 0 0 0.00350070495106306 0.00243671935457408 0.00292751378841524 0 0 0 XM_003586536.1 LOC786246 PREDICTED: Bos taurus uncharacterized LOC786246 (LOC786246), mRNA. 5e-149 533 91.37 0.123725834797891 XR_248005.1 LOC101927780 PREDICTED: Homo sapiens uncharacterized LOC101927780 (LOC101927780), transcript variant X2, misc_RNA. 1e-112 412 73.43 0.230931458699473 0 noncoding 0 0 0 0 -0.364990684049644 0.608091146903376 0.000288476304539334 0.995577235085997 TGGAAGAAATATGTAGGGCAAGGTATGGGGAAAAAGCATGAAGTTTCCCTGCTGCTCTGCCCAAATCTCTAAGTGTTCACCAACCCGGAACCTCTCTGAACCCATTATCACGCCAACATTGGGACAGAGCCACAGGGACAGCAGAATTTTCCACTTGGCTTATGTTCCCAGAATTCTGGGGCCCTGATGAACTTAATCCATGTGTCAGGACCCCCAAATGGGGTCAGCACACATCACAAACCTAAACCTTAGGCAGCCTGCACTTATGGGAAACACCTGTCAAGGAAGTTTACACCAATCACAGTCCTCCAACTCAGCTATAGCTAGTTCACCTGAGCCTTCTGTTATATAAGCCCTTGAACGCCCAGTCACACCTTTCTTCAGCATTGCCTCTTCTCGTGCACACAGGACTCACTGTTGCCCGAAATCCCTCAAGGAGAGTGCTTGAGACACTGTCCTCCCCCAAGCCATGGATGGTTTTCCCTTGAACAAAGGACAAACTAGATGGCTACTAGATTTAGTTTTATCATTTGACAGGCCCCAGCTAAGATTCTAGGGACTGACTTCCCGAGGCTCAGAGCTGTCTCCTGGACTTCAGGGGGGCTACCAACAGTAACTGCTGAGACTATACAATGGATCTTGAAGAATGTGGACCTTGAGTCAGGAGACATAGACTTGAAACTTGACTCTGCATTCGCCCTACAGTAGCAAACTCCCAAACCTCACTCTCTTCATTGATTAAATAGCAACAATAATACCCACTTTACATGACTATGGTGATTTTTAAAAAATAGGATGATTTGTAAGCTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGTCAATTGGATGGCATCGCTGACTCGATGGACATGAGTCTGAGTGAACTCCGGGAGTTGGTAATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTTGCAAAGAGTCGGACATGACTGAGTGACTGAATTGAACTGAACCTCTCCATACAAATTATAGTTGCAGTTAGCATAATTGAAGAATCAGGTTTAAAAGCAGGGACCTTTAGCTGAGTCAGCATTTCCCCATCTAAATGCTTGAAAACATCAGTGGAAGAGCTGGGAGGAGAGGAGGGAGAAAAGGAAGAGGGGGAAGTGGGGAAGAGGAGGAGGGAGAGTCATGTTCCAACTCATCCTAAAGGAGGCACAGAGTTCAGTCACTGCTGCTAAGAGCAGGGCCTAGTTCTCAGCTCCATCTGTCATATTCCCCAGACACCTCCACTCTCGTTAGCTCTCCATTTGCTGAGGAAGGGATAAGGGAAGTGGAACCAAGGAGCTGTATGTTTTGTTTGTTTCCTACTACAATCTGTCTTAGAGGCAGAGCATAAGTAATCCAGAACTTCTCGCCTCGCTCTGCACCCTCAGGGATTTCATCCCACATGGAAGCCAAGACCCTTCAAAGGCAGGAAAGGGACTCAGATTCTCCTTCATTTGTCTTTTATGTGAGAGAGAAACAGGGTCTGTCTCTCTCAGCAGGAACACTCCACTTGGAGTAGAGGTGCCGGAGGGCCCAGGGCAGGGCAGTGAGATCTTGGTCAAGAAACAAACGGGGTCAAGCAAGGTCACTTTCAAACCAGTTCATATTTCTGAGGAAAGGCCAAGACTGAGCCAGCCTGGGACATGGTAGCTTTCTACTCATAAGCTGGAGAACTGGTCCCTGGCAGGACCAAGGAATGGGTCTTTGTGAAATGCTGGGCAAAGCCAGCTGGAGGCCCTGTTAGTGGAATCAGGCCAGTCCTGAACTTCCCGGATGACCTGGAGCCACACATCAGCTTCCACATGACTCCAGGGCCAGCCAGACAACTACATGGCCGTGCTGAGAAAGCCCACAGGCATGGGGATGACTGGATCGGGTCTCGAGAGGGACATTAAGGCATACTGGAAATAGTGTGTCTGGAATCTTGTGTACTTGAGTCCTCAGGAATGCACGGTCTGGGTAGCTTTCTGATGTGACTTACAGAAAGGTCTCGTGGGGATAGAGGAGGAATGTGGTAACAGCTCTGGATCACCTTGGAAAAATAGCGCTCATTTGCCAGCCTGGCACTGCAATTCCAGGAAGCAGCTGTTGGTGAATCAGCAACCGTCTCTTTTCCTGTGGTTTCAGGAAGCTCATTCAGGGCCTCACCCACCTCCTAACCAGGAGAAACCCCTCAGCCACACATGGGCTCTTCTGGGAGGGACTGAAAGGGGGGCTCCCTAAAGCTGGGGGAAATGGGAAGACATGAAGGACCTCACAGCCCCAGGACCTACCTACATCTTTTGAAAATATTCTCCAGATTTCACTACAGAAAATCCATTCCAAGTTCCTGGTTCTCTCTTCTGGAATTCATCACAACCCAGAAACCAGCTTTTTGTTCATATATAGATTGGCCCAGTGATTCTCATCAGCTACACCTGGAAACCTGTTAGAACTGCAAATCCTCAGACCTCACCCCAGACCTACTGAACTAGAAACTCCAGGGGAGGAAACCTGTTAGAACTGCAAATCCTCAGACCTCACCCCAGACCTACTGAATTAGAAACTCCAGGGGAGGGGCTGGCAAGCTCTATTTTAACCAGTGCTCCAGAGGATTCTAAGTTCTCTAGTTTGAGAACCAGTTAGGCTGCAGGCTCCATGAGGGTTCTG TCONS_00014715 TCONS_00014717 TCONS_00014719 TCONS_00014720 TCONS_00014721 s 3' 16031 TCONS_00014715 TCONS_00014717 TCONS_00014719 TCONS_00014720 TCONS_00014721 s 3' 16031 EMBV3_32867 CAAACGTGCTGGGGTGACCTGCATCGTCCTGCCAGCTGAGAACAAGAAGGACTTCTATGA Gene GeneID:510796|LONP1:NM_001015569:51_cdna Constitutive 0 NULL GeneID:510796 7 GENE LONP1 PRSS15 lon peptidase 1, mitochondrial EMBV3_33876 GCAGGCACCCTCATACCTTTTCTGGCTTATTTTGGCAAGGAGGTGGCTGTTGAGATGAAG Gene BVV0102_246149 - 1 EMBV3_26819 GK000002.2:72592435-72977074 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02056 GTATTAGACGTACAGTATCCAGCCTGCTAGTCCTTGCCAGAGACATCCAGACCTATGTGC Gene GeneID:530358|KLF3:XM_002688201:64_cdna Constitutive 0 NULL GeneID:530358 6 GENE KLF3 NULL Kruppel-like factor 3 (basic) EMBV3_05412 TACCATGTGAGGACACAGTGGAAGGTCGTCTGCCATCGAGGAAGAGGCTTCTTACCAGAA Gene BVV0102_078158 + 0 NULL GK000011.2:78323261-78464204 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23856 TCAGGGCAGGAAGGAACTTCGCTTGGCCACTTCCAAGAACCTCAGCCGTGACGTTTGGGG Gene GeneID:282308|PIK3R2:NM_174576:11_cdna Constitutive 1 NULL GeneID:282308 7 GENE PIK3R2 MGC138113 phosphoinositide-3-kinase, regulatory subunit 2 (beta) EMBV3_13175 TATTTCAAAGGGTGCTTTTTAGAACCAAAGAAAGTGAAATTATTATTGACGATGGACAAT Variant GeneID:518469|GPCPD1:XM_002692364:238_cdna 424^499 2 EMBV3_14255 GeneID:518469 13 GENE GPCPD1 NULL glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) EMBV3_32168 GGTCTTCCAGGACGAGACGGGCAAGAACCGGGAAGAGCATCACCCCTCAGTGCCTTACCA Variant GeneID:404124|ST6GALNAC2:NM_205791:13_cdna 612^719 1 EMBV3_14053 GeneID:404124 11 GENE ST6GALNAC2 MGC143352 SIAT7B st6GalNAc-IV ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 EMBV3_04377 ACAATGAGATCACCTGCAGCAGCGAAAACAATGCCTGTGAGGCCTTCATCTGCAACTGTG Gene GeneID:100337497|LOC100337497:XM_002694597:696_cdna Constitutive 0 NULL GeneID:100337497 17 GENE LOC100337497 NULL Phospholipase A2-like EMBV3_30533 GGACTCTATCCAAAGAATGGGTTTGTATTTAAGGGCCCCAGCAGTTAGATCATCCTCAGA Gene GeneID:538640|ESRP1:XM_002692816:145_cdna UTR3_Alt 2 NULL GeneID:538640 14 GENE ESRP1 RBM35A epithelial splicing regulatory protein 1 EMBV3_42603 GCTGCTTCGACTATGCCAGGGCGTGCCCAGTCCCTGCCTTTATAACTACCTCTGCGTTCA Variant GeneID:525332|RPESP:NM_001075869:37_cdna 269^463 1 EMBV3_18757 GeneID:525332 14 GENE RPESP NULL RPE-spondin EMBV3_08398 TACCAAAGAGCTTGATACACCAAAGACAAATTAGCCCACACAGCCTCCCTCTTCGCTCCG Gene BVT0101_004747 + 1 EMBV3_32749 GK000010.2:38248607-38298318 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37811 GTCGGAGTTCAGTTAAGTTCCTTATGTCATCCCCTGAAATTGCTTCGCTCTCATGGGGGC Gene GeneID:533224|C29H11orf67:NM_001037473:25_cdna Constitutive 0 NULL GeneID:533224 29 GENE C29H11orf67 C11orf67 MGC133476 chromosome 11 open reading frame 67 ortholog EMBV3_19652 GGTTCAGTTACAAGAGACAAACTACTCTAGCCTGTGGACTGGACTGCTAAGAATGACTCC Gene BVT0102_339730 - 1 EMBV3_39633 GK000008.2:24856904-24916218 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25424 GAGGAGAAAGCCATCTACTTTTCTGAAAAGTGACGTCTGGGAGCAGCGAACTGGAAAAAG Variant GeneID:514295|COMMD7:NM_001035291:1048_cdna 365^455 1 EMBV3_03557 GeneID:514295 13 GENE COMMD7 MGC128998 COMM domain containing 7 EMBV3_22401 AGTCTGCCTGAGGACGCCGGACATTACACCTGTCCAACATGGAGGCCAGCGAGGTTTCGT Gene BVV0102_121903 + 0 NULL GK000017.2:66097413-66102467 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077904 TCONS_00077905 1 XLOC_047171 Coding TCONS_00077904 XLOC_047171 Coding Coding ACACB 17:66101181-66186007 j TSS58092 8427 1 TCONS_00077904_12 2273 52 0.901267315060418 0.00016503029943977 0.000152419470041867 0.000103342174444199 5.59046157808119e-05 4.35993526997358e-05 5.18403169020769e-05 8.58092752946104e-05 5.54462745742918e-05 3.1846298133714e-11 5.12754083262273e-11 0 3.96961878428261e-13 4.76587382962797e-06 9.1544027937756e-05 3.34084624134756e-05 0 1.37854988524775e-05 0 0.000180182969785478 4.27316815575757e-09 6.55623471580071e-05 2.91011668724442e-07 0 3.58034686304036e-05 0.000150181122520373 0.000102415411597244 6.10198012221363e-05 1.13667547515722e-06 1.04802464452853e-10 0 NM_001205333.1 ACACB Bos taurus acetyl-CoA carboxylase beta (ACACB), mRNA. 0.0 1.477e+04 99.99 0.972232111071556 XM_005253876.1 ACACB PREDICTED: Homo sapiens acetyl-CoA carboxylase beta (ACACB), 0.0 8477 85.88 0.861753886317788 TCONS_00077904_12 sp|O00763|ACACB_HUMAN ACACB_HUMAN Acetyl-CoA carboxylase 2; 0.0 4242 89.74 0.985921689397272 0 coding 0 0 0 0 -0.0170394032005275 0.883695549384486 0.0236935826669978 0.664344715126579 ATGGAGAAGTCAGGCGCAGAGTTGAGCTCCTGCAGGCTGGTGCGCCACTCGGCCCGAGGGTCTCTAGGACAGCGCCTCTGCCTCCCTGTCACGACCTGGCCGGGCCCCAGGACCGGGGTCTGCTTCACGAGTTTCGGGGATGCATGCTCTGCGTCCCAAGAGCAGCCTGGTGAGCGGCAGGACGGTCAACATGAGCCCTGCCAAGTGCAAGGTCTGTTCCCCTGACCGCAAAGTAAAGCCCAGCATGTCGGGGCTCCACCTGGCAAGAAGGGGCCGAGAACAGAAGAAAGTGGACCTGCACAGAGACTTCACCGTGGCTTCCCCTGCTGAGTTCGTCACACGCTTTGCGGGGCATCTGGTCATCGAGAAGGTGCTCATCGCGAACAACGGTATTGCCGCCGTGAAATGCATGCGCTCCATCCGCAGGTGGGCCTATGAGATGTTCCGAAATGAGCGGGCCATCCGGTTCGTAGTCATGGTAACGCCAGAGGACCTCAAGGCCAACGCAGAGTATATCAAGATGGCAGATCAGTATGTCCCTGTCCCAGGAGGGCCCAACAACAACAATTACGCCAACGTGGAGCTGATTGTAGACATCGCCAAGAGGATCCCCGTGCAGGCGGTGTGGGCTGGTTGGGGCCATGCTTCTGAAAACCCCAAACTTCCGGAGCTCCTGCGCAAGCACGAGATTGCTTTCCTAGGCCCTCCCAGCGAGGCCATGTGGGCACTAGGAGACAAGATTGCCTCCACCATCGTGGCCCAGACTCTGCAGATCCCAACGCTGCCCTGGAACGGAAGTGGTCTGACGGTGGAGTGGGCGGAACACAGTCTACAGGAGGGGCAAAGGATCAGCATCCCAGAGTCCGTCTACAACAATGGTTGCGTGAAAGATGTAGATGAAGGCTTGGAGGCAGCAGAAAAAATTGGTTTTCCCTTGATGATCAAAGCTTCTGAAGGCGGTGGAGGGAAAGGAATCCGGAAGGCGGAGACTGCTGAGGACTTCCCCATCCTGTTCAGACAAGTGCAGAGCGAGACCCCTGGCTCCCCAGTCTTCCTCATGAAGCTGGCCCAGCGTGCCCGGCACCTGGAGGTCCAGATCCTCGCCGACCAGTACGGGAACGCAGTGTCCCTGTTCGGGCGTGACTGTTCCATCCAGCGGAGGCACCAGAAGATCATAGAGGAGGCGCCGGCCACCATTGCCACGCCAGCCGTGTTCGAGTTCATGGAGCAGTGTGCCGTGCGCCTGGCCAAGACGGTGGGCTACGTGAGCGCGGGGACTGTCGAGTACCTTTACAGCCAGGATGGCAGCTTCCACTTCTTGGAGCTGAATCCCCGCCTGCAGGTGGAACATCCCTGCACGGAAATGATCGCGGATGTCAACCTGCCTGCTGCCCAGCTGCAGATTGCCATGGGTGTGCCGCTGCACCGGCTGAAGGATATCCGGCTTCTGTACGGAGAGTCCCCGTGGGGGGTGACGCCCATTTCTTTTGAGACCCCTAGCAACCCTCCCATTCCCCGAGGCCACGTCATTGCAGCCAGAATCACCAGCGAAAACCCAGATGAGGGGTTTAAGCCGAGCTCCGGAACGGTCCAAGAATTGAATTTCCGCAGCAGCAAGAATGTATGGGGTTATTTCAGCGTGGCTGCGACTGGTGGCTTACACGAATTTGCGGATTCCCAGTTTGGGCACTGCTTTTCCTGGGGGGAGAACCGGGAAGAGGCCATTTCGAACATGGTGGTGGCTTTGAAGGAACTATCCATCAGGGGCGACTTCAGGACCACCGTGGAATATCTCACCAACCTTCTGGAGACTGAGAACTTTCAGAACAACGACATTGACACCAGCTGGTTGGATAACCTCATTGCTGAGAAAGTGCAGGCTGAGAAGCCAGATATCATGCTCGGGGTTGTGTGCGGAGCCTTGAACGTGGCCGACTCCATGTTTAGAACATGCATGACGGACTTCCTACACTCGCTGGAAAGGGGCCAGGTCCTCCCCGCAGACTCTCTGCTGAACATCGTGGACGTGGAATTAATCTATGGAGGTGTCAAGTACATTCTCAAGGTGGCCCGGCAGTCTCCGACCATGTTCGTGCTCATCATGAACGGCTCTCACATCGAGATCGACGCCCACCGGCTGAACGACGGGGGGCTACTGCTGTCCTGCAGCGGCAACAGCTACACCACCTACCTGAAGGAGGAGGTGGACAGTTACCGAATCACCATTGGCAACAAGACGTGCGTGTTTGAGAAGGAGAATGACCCCACAGTCCTGAGATCCCCTTCGGCTGGGAAGCTGGTGAAGTACACTGTGGCAGACGGGGAACACGTTGAGGCTGGGGGCAGCTACGCCGAGATAGAGGTCATGAAGATGACCACGACCCTGAACGTGCAGGAAAGTGGCCGGGTGAAGTATGTCAGGCGCCCGGGGGCTGTGTTGGAAGCTGGCTGCGTGGTGGCCAGGCTGGAGCTCGATGACCCTTCTAAAGTGCGCCCGGCTGAGCCGTTCACGGGGGAGCTCCCCTCACAGCCCACGCTGCCCATCCTCGGAGAGAAGCTGCACCAGGTTTTTCACAGCGTCCTGGAAAATCTCACCAACATCATGAATGGCTACTGTCTGCCGGAGCCTATTTTTAGCATCAAGCTGAAGGACTGGGTGCAGAAGCTCCTGAGGGCCCTCCGGCACCCGTCGCTGCCGCTGCTGGAGCTTCAGGAGATCATGACCAGTGTGTCGGGCCGCGTTCCCGCCCCCGTGGAGAAGGCCGTCCGCAGGGTGATGGCCCAGTACGCCAGCAACATCACCTCGGTGCTCTGCCAGTTCCCCAGCCAGCAGATAGCCACCATCCTGGACTGCCACGCAGCCACCCTGCAGCGGAAGGCCGACCGGGAGGTCTTCTTCATGAACACCCAGAGCATTGTACAGCTGGTCCAGAAGTACCGCAGTGGGGCCCGCGGCTACATGAAGGCGGTGGTCTTGGACCTCCTGCGGAGATATTTACTGGTTGAGCACCATTTCCAGCAAGCCCACTACGACAAGTGTGTGATAAACCTCCGGGAGCAGCTGAAGCCAGACATGGCCCAGGTGTTGGACTGCATCTTCTCCCACTCGCAGGTGGCCAAGAAGAACCAGCTGGTGATCATGTTGATTGATGAGCTCTGTGGCCCAGACCCATCCCTGTCCGATGAGCTGACCTCCATCCTCGACGAGCTGACTCAGCTGAGCAAAAGCGAGCACTGCAAGGTGGCCCTCAGAGCCAGGCAGGTCCTGATTGCCTCCCATCTCCCCTCCTACGAGCTGAGGCACAACCAAGTGGAGTCCATTTTCCTGTCTGCCATTGACATGTACGGCCACCAGTTCTGCCCAGAAAACCTCAAGAAATTAATACTCTCAGAAACAACCATCTTTGATGTGCTGCCCACTTTCTTCTACCACGCTAACAAAGTGGTTTGCATGGCATCCTTGGAGGTCTATGTGCGGAGGGGCTACATCGCCTATGAGCTAACCAGCCTGCAGCACCGCCAGTTCCCGGATGGCACCTGCGTGGTGGAATTCCAGTTCATGCTGCCCTCCTCCCACCCGCACCGGATGACCGTGCCCATCAGTGTCACCAACCCGGAACTGCTGAGACACAGCACGGAGCTCTTCATGGACAGTGGCTTCTCCCCCAAGTCCCAGCGAATGGGGGCCATGGTCGCCTTCCAGAGATTCGAGGATTTCGTCAGGAACTTTGATGAGGTCATCTCCTGCTTTGCCAACATGCCCAAGGACACCCCCCTCTTCAGCGAGGCCCGGAATTCCCTGTACTCTGAGGACGACAGCAAGAGCCTCCGAGAGGAGCCAATCCACATCCTAAATGTGGCCCTCCAGCACGCGGACCACCAGGAGGATGAGCAGCTGGTGCCCATTTTCCGAACATTCGTGCAGTCCAAGAAAAACATCCTTGTGGAGTGTGGACTCCGAAGAATCACATTCCTGATTGCCCAAGAGAAAGAATTTCCCAAGTTTTTCACATTCAGAGCAAGAGATGAGTTTGCAGAAGATCGCATCTACCGTCACTTGGAGCCGGCCCTGGCCTTCCAGCTGGAGCTCAGCCGGTTGCGAAACTTCGACGTGACCGCCATGCCCTGCGCCAACCACAAGATGCACCTGTACCTGGGTGCCGCCAGAGTGAAGGAGGGCGCCGAGGTCACGGACCACAGGTTCTTCATCCGGGTCATCATCAGGCACTCAGACCTGATCACCAAGGAAGCCTCCTTCGAGTACCTCCAGAACGAGGGCGAGCGGCTGCTCCTGGAGGCCATGGACGAGCTGGAGGTGGCATTCAACAACACCAGCGTGCGCACAGACTGCAACCACATCTTCCTCAACTTCGTGCCCACCGTCATCATGGACCCCTCCAAGATTGAGGAGTCGGTGCGGTCCATGGTGATGCGCTACGGCAGCCGCCTCTGGAAGCTCCGCGTGCTCCAGGCTGAGGTCAAGATCAACATCCGCCAGACCACCGCCGACAGCGCCATCCCCATCCGCCTCTTCATCACCAACGAGTCAGGCTACTACCTGGACATCAGCCTCTACAAGGAAGTGACCGACCCCAGATCTGGAAACATCTTGTTTCACTCCTTTGGCAACAAGCAAGGCCCCCAGCATGGGATGCTGATCAACACTCCCTATGTCACCAAGGATCTGCTTCAGGCCAAGCGATTCCAGGCCCAGTCCCTGGGTACCACCTATGTGTATGACTTCCCAGAAATGTTCAGGCAGGCTCTTTTTAAAATGTGGCCCTCTCCGGACAAGTACCCCAAAGACATCCTGACGTACACCGAACTCGTGCTGGATCCGCAGGGCCAGCTGGTGGAGATGAACCGACTTCCTGGAGGAAATGAGGTGGGCATGGTGGCCTTCAAAATGACGTTGAAGACCCTCGAGTACCCCGAAGGGCGTGACATTATCCTCATCAGCAATGACATCACCTTCCGTATCGGATCCTTTGGCCCCGGAGAAGACCTTCTGTACCTGCGGGCGTCTGAGCTGGCCCGGGCCGAGGGCATCCCCAGAGTCTACCTCGCGGCCAACAGTGGGGCCCGTATCGGCCTGGCAGAGGAGATCAAGCACATGTTCCAGGTGGCTTGGGTGGACCCGGAAGACCCCCACAAGGGAATTAAATACCTGTACCTGACCCCCCAAGACTACACCAGAATCAGCTCCCTGAACTCCGTCCATTGTAAACACGTGGAGGAAGATGGAGAATCCAGGTATGTCATCACGGACATCATTGGGAAGGAGGAGGGCCTGGGCGTAGAGAACCTGAGGGGCTCAGGCATGATTGCTGGGGAGACCTCCCAGGACTACGACGAGATCGTCACCATCAGCATGGTGAGCTGCCGGGCCCTCGGGATCGGGGCCTACCTGGTGAGGCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCACATCATCCTCACGGGGGCGACGGCGCTCAATAAGGTCCTGGGCAGAGACGTTTACACGTCCAACAACCAGCTGGGCGGTGTGCAGATCATGCATCACAATGGCGTCTCGCATGTCACCGTGCCAGATGACTTTGAGGGTGTTTGTACCATCCTGGAATGGCTGTCCTATATGCCAAAGGATAATCGCAGCCCAGTCCCAGTCGTCACACCCAAGGACCCCATTGACAGAGAAATTGAATTCCAACCATCTCGCGGGCCCTACGACCCCCGGTGGCTGCTTGCAGGAAGACCTCACCCAACTCTGAAGGGATCCTGGCAGAGTGGATTCTTTGACCAGGGCAGTTTCAAGGAGATCATGGTGCCCTGGGCCCAGACTGTGGTGACGGGACGAGCAAGGCTGGGGGGTATCCCCGTCGGAGTGATAGCTGCAGAGACGCGGACGGTGGAGTTGGTTGTGCCCGCCGACCCTGCCAACCTGGATTCCGAGGCCAAGATAATCCAGCAGGCTGGCCAGGTGTGGTTCCCAGATTCGGCCTATAAGACGGCCCAGGCCATCAAGGATTTCAACCGGGAGAAGTTGCCCCTGATGATCTTTGCCAACTGGAGGGGGTTCTCCGGGGGCATGAAAGACATGTATGACCAGGTGCTAAAGTTCGGAGCCTACATCGTGGATGGCCTCCGGAAGTACAGACAGCCCGTCCTGATCTACATCCCGCCCTATGCGGAGGTCCGGGGCGGCTCCTGGGCAGTCATGGACACCTCCATCAACCCGCTGTGCATAGAGATGTACGCGGACAGAGAGAGCAGAGCAAGTGTTCTGGAGCCAGAGGGAACAGTGGAGATTAAGTACCAGAAGAAAGATCTGGTGAAGACCATCAGAAGACTCGACCCCATTTCCAAGAAGCTCGTGGAACAGCTCGGAGTGTCTGAGCTCTCAGACACGGACCGCAAGGAGCTGGAGGGCCAGCTGAAGGCCCGGGAGGACCTGCTGCTGCCCATGTACCACCAGGTGGCGCTGCACTTTGCCGACCTCCACGACACGGCGGGCAGGATGCTGGAGAAGGGCGTCATTTACGACATCCTGGAGTGGAAGACGGCCCGCAGCTTCCTGTACTGGCGCCTGCGCCGCCTGCTGCTGGAGAGCCAGGTGAAGCAGGAGGTCCTGAGGGCCTGCCCCGAGCTCAGCCACATGCATGTGCAGTCCATGCTGCGCCGCTGGTTTGTGGAGACGGAGGGCGCTGTCAAGGCCTACCTGTGGGACAACAACCAGACGGTGGTGCAGTGGCTGGAGGCGCACGGGCAGGCGAGCGAGGGGCTGCACTCCACCATCCGGGAGAACATCACGTGCCTGAGGCGGGACTCCGCCCTCAAGACCATCCAGGGCCTGGTTCAAGAAAACCCCGAGCTGGCCATGGACTCACTGGTGTACGTCAGCCAGCACATCAGCCCGGCCGAGCGGGCCCAGGTCATTCACCTCCTGTCCACCACGGACGGCCCGGCCTCTACCTGACCCCCGGTCCTCCTGGTCGTTCGCAGGACCTCGGGCAAGAGAAACCACACCGATCCACTGACTGCAGGCCCTTGCCAGAACCGTGGGGGTTTGCTTTTTAAAACTCCTGGGCGTTGCCGCAAGGCTGCTGACCCCCAGCTCACTCCTGTTTAATAAAAGGCTCGGGAGCGCCCCCTTCCAAGCAGAAACCGCCCCCTTCTCCGTTGCTGGGAAGTCTGGTTTTTAGCTCTTTAAGACACTTTGCTCCATCGTTGAATCGAATTGAACCCAAACACTCCAGCTTCCATCCACTTTCTGTTGCTTTGCAGGATCCAGGTATTCTTTTAGACTCATTTTCTATCAGAGCATGGAATCTTATTATTATTTTTTTACTCCAGGACTAGCTCTTGATGTAAGCCTCTCACAGGTTTCAGCAGTATAACAAGGAAATCAAAATAAGAGATGAGAAAAGAGAAAATCTACTTTTGTAGTCTGCTTATTTGAATCCTTATTTGAATTCCTCTCACCCAGGAAAGGGTATGAATGATTTTTTTTTTTTTAATTAAGAGTACAAAATGGTGTTTTGTTCCCCACAAGACTCCTAGCTAATCACTAGCAAAGTCCCGTTACTGGGCTTAGTTCCCTCATTAGTAGAAAATTGCATAGCCCTAGGCTCAAGGGCGTTGGGAGACTTTTTTTTTTTCACGTGGTTCACAGCCCTCTGCCTGCCCCTTCTCTCCAAGGAGGAGGGGACTCTAGCTTGGGCTGGGAGGACAGAGAAGAGAGGTAAGACCTCCAACCTCAGCAGCCTGGCTTGCTCACAGGTGTCACCCCTGTGGTTGCCGTCACCTGCCTCGGAGGCCCCTCAGGTCCCCTTCACTCTCGCGCCTCCTGCCTCGGTGTCCGTGGGGGGCTGTAGCCCGAGGACAGAGCCGGTGGTTCCCAAGGACTGGACTATGAGGACCACGCTGATTCACTCAGGGAGGGCTTCGTGAGGCCGCTGCCAGCACAGCCCCGAAGACCACACAGCGTCAGGACCTGCGATCCTCCCGGCCGCATCCATCTGTCCCTGGTGCCCATGATGGAGGGAGCCGGCCATCCTCCACTGCCGTGACGGGCAGTCTGCCTGAGGACACCGGACATTACACCTGTCCAACATGGAGGCCAGCGAGGTTTCGTGGGGAAGCCCCTACAAGCGGGAATGCCGGGGGATGTCTGAGGCCATCGGCCAATGATGACAGCCCTGGCCAGCGTAGGTGGTGTGGGCGCAGTGAGGGGTGGGAGAAAGAGAAATCAGCCTCTCTCGTGTCCCGAGACTGATGGGAGTGGGTAAGAGTCCATGCGGCTTTGGGAACCGATTTCTTTCCATGTAGGGGAGTCCCTGCGGGTTTGGGAGGGACGATACATCGATGACTAGCTACAACCCAGGAACGGTGCGTGGAGGAAACTACCAGGAAATGTGTGGAATAAATTATTTTTGGAAGGAA EMBV3_06156 GTTTCACAGGAAGGAAAGGCGCTCAGGAGCCAGTAGGGCAGGAGGTGGTGGCTGGAATTA Gene BVT0102_220066 + 1 EMBV3_14636 GK000015.2:30033584-30056478 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20869 GCGTCCTCTGGCCATGGGTATGACCTTTGTGATTTTGAGAATATGTGGGACTCTACCTGG Gene GeneID:615094|SLCO6A1:XM_002689417:77_cdna Constitutive 0 NULL GeneID:615094 7 GENE SLCO6A1 NULL solute carrier organic anion transporter family, member 6A1 EMBV3_18379 AAATTCAGTATATTGTTGTAAAGACCTATGTGTTCTGGACCATCAATGGAGCCTACAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40116 AGACAGAGGTGCTGCTGCAGCCCAACCCCAGGAAGACGCTGATCAAGGTGGCGGAAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15133 CTGCTGCTGCTCTTTCCGCTCACGGCGCAGCATGAGAACTTCAGGAAAAAACAAATTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10660 AGGAAGCTCATGAGTGGAACCAGAAAAGAGGTATTTCAGACCGAACAAAAGAATCTTTTC Variant GeneID:616069|N4BP2L1:NM_001046574:214_cdna 338^426 2 EMBV3_27227 GeneID:616069 12 GENE N4BP2L1 MGC137817 NEDD4 binding protein 2-like 1 EMBV3_39618 GTTTTGTGACTACAGCTGCTAGCTCTTCAGACCAGGTTCATGCTTGGACCTCATTCCAAT Gene GeneID:768233|ELMOD1:NM_001078108:26_cdna Constitutive 2 NULL GeneID:768233 15 GENE ELMOD1 MGC143134 ELMO/CED-12 domain containing 1 EMBV3_05286 AACAGGGGTGACCTTTGCTGCTGGAGTCGATGTCCTGCTCAAGTGTTGTTAAGTCTACAG Gene GeneID:286773|PDCL:NM_174759:5_cdna Constitutive 0 NULL GeneID:286773 11 GENE PDCL NULL phosducin-like EMBV3_11305 AAGCTTGTCCCCACTCCCACTTACTTGTCCGCTCTATTTCCTACTGAGAGAGCACATCCC Gene BVV0102_041409 + 1 EMBV3_20719 GK000003.2:99429472-99446556 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07243 AGCCGAGAAACTCGACATCATCCGTCAGAAGGCTTCACCCCCATGACGGTGCCAGACCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03896 CATGGCCTGCTACCAGCTCTCCGGCCTCAATGCGATTTGGTTCTACACCAACAGTATCTT Gene GeneID:100337051|LOC100337051:XM_002688456:39_cdna Constitutive 0 NULL GeneID:100337051 6 GENE LOC100337051 NULL solute carrier family 2 member 9 protein-like EMBV3_43574 GAAGTACAGGCAATCACTTCTTCCAAGACAAGGCTGCTGTAGCAACAAGGTCTGCAGAGG Gene BVV0102_427271 + 0 NULL GK000024.2:25957998-25978318 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139963 1 XLOC_085027 Coding TCONS_00139963 XLOC_085027 Coding Coding DSG3 24:25976190-26009781 = TSS104583 6025 1 TCONS_00139963_7 988 0.0321991701244813 16 0.821107472462042 0 0 0 0 0 0 0 0 0 1.22922340533268e-05 1.02287052147732e-05 0 0 0 3.64256574661333e-13 0.00579557219910284 0.00190263985378116 0.00488214384612523 0 0 0 0.00150169701486794 0.000896354373440709 0.00341377155297583 0 0 0 0.000210888831281015 0.000335838803052589 0.000476815782844236 NM_001192685.1 DSG3 Bos taurus desmoglein 3 (DSG3), mRNA. 0.0 6911 100.00 0.635850622406639 NM_001944.2 DSG3 Homo sapiens desmoglein 3 (DSG3), mRNA. 0.0 3036 79.77 0.555850622406639 TCONS_00139963_7 sp|P32926|DSG3_HUMAN DSG3_HUMAN Desmoglein-3; 0.0 1478 76.95 0.998987854251012 2 coding 0 0 0 0 -0.036776831298758 0.780444941292067 -0.00488728663605228 0.914460130478841 AGGGTGGGGAGGATCTGCATAACAGGCCATCTGCAGACTCCTGAAGACAGGAGAGACGCTGAGAAAGGGCTTTCTTGAGACGTCGTATGCCGACGGTTGGAAGGACCAAAACGGCAGCTCCCTTCGTTCACCAGGGAAATCAGAAACCATGGCTTGGCTCCCTTTCAGAACCACAGGGGCTCTGGCCATTTTAATGGTGGTTCTTTTGGTTCATGGAGAATTGAGAATACAGACAAAAGGACAATACGAAGAATATGAGACCGCAATACAAGGCAAAAGGAGATACAAACGTGAGTGGGTGAAATTCGCAAGACCCTGCAGAGAAGGAGAAGACAACTCGAACAGAAATCCAATTGCCAAAATTACTTCAGACTTCGAAGCAACCCAGAAAATTACCTACCACATCTCGGGAATAGGAATTGATCAGCCCCCTTTTGGAATCTTTGTCGTTGACAGAAACACTGGGGAAATTAACATAACAGCCATAGTTGATAGAGAAGTAACCCCAAGCTTCCAGATTACGTGTCGTGCTCTCAACGCCCTAGGACAAGACGTAGAAAAACCACTTATACTAACAGTCAAAATTTTAGATATAAACGACAATGCTCCAGTATTTTCACAAAGCATATTCCAGGGTGAAATTGAAGAAAATAGTGCTTCGAACTCATTGGTGATGATACTAAATGCCACAGATGCAGATGAACCGAACCACCTGAACTCTAAAATTGCCTTCAAAATCATCTCTCAGGAACCTGCAGGCACATCCATGTTCCTCCTAAGCAGACACACAGGGGAAGTCCGCACTTTGACCAATTCACTTGATCGAGAGCAAGTTAGCAGCTATCGCCTGGTTGTGAGTGGTGCAGACAGAGATGGAGAAGGACTATCATCTCAGTGTGAATGTAGCATTAAAGTGAAAGATGTCAATGATAATTTCCCCACATTCAGAGAATCACAGTATTTAGCAAGGATTGAAGAAAACACTTTAAGTTCTGAGTTGCTTCGAATTCAAGTAATAGATTTGGACGAAGAGTTCACTGATAATTGGCTTGCAGACTTCTTCTTCACGTCTGGAAATGAAGGGCATTGGTTTGAAATAGAAACTGATCCCAGAACTAACGAAGGTATCCTGAAAGTAGTTAAGTCTCTAGATTATGAACAAGTACAGAGCATGCAACTTGGTATCGCCGTCAAAAACAAAGCTGAATTTCACCAATCCGTAATCTCTCAATATCAAGTCCAGTCAACCCCACTCATAGTTCAAGTAATAAATGTGAGGGAAGGAATTGCATTCCGTCCTTCTTCCAAGACATTTACTGTCCGAAAAGGCATAAGTAGTAGACAGTTGATCAATTACGTCCTGGGAACCTATCAAGCCATTGATGAAGACACTGGTGAAGTTGCGTCATTTGTCAGATATGTCTTGGGACGTAATGACGGTGGTTTGCTAATGATTGATTCAGAAACTGCTGGAATCAAATTTGTCAAAAACATTGATCGAGACGTTACTTTCATAGTTAACAAGACAATCACAGCTGAAGTTCTGGCCATAGATGGAAACACCGGTAAAACTTCAACAGGCACCATATTTGTCCTAGTACCTGATTTTAATGAAAAGTGTCCAACAATTGCCCTGGAAAAGGAAGCAGTCTGTAGTTCGTCACCTTCCGTGGTTGTCAGAGCTTCACCACTGGAAAGGGATAAATATGCTGGCCCCTATGAATTTTCAGTGGAACACCAAAGCCTAAAACTTCCAGTTGTATGGAGTATCTCAGGAAGAGATGCTACATCCGCACTCCTCACAGCCCCACAGCCAGTCTCTCCCGGAGTGTACAGAATCTCCGTCATGGTCACGGACAGTGAGGGGAGGCGGTGCGAGGAACCAGAGAGCTTGACCCTGGAAGTCTGCCAATGTGACTACAGGGACATCTGTCCAAATGTGTATCCAACCAGCATCCCTAATCCCATAATTGGAGAGAGGTCTGGGAGGATGGGGGCTGCCGCCATCGGTCTGCTATTCCTCGGCCTTTTGCTGCTACTGTTGGCTCTCCTCCTGCTGCTGACCTGTGACTGTGGGGCAGGTCCTATTGGGGGAGTGACCGGTGGATTTGTCCCGGTGCCGGATGGTTCAGAAGGAACAATTCACCCGTGGGGAATTGAAGGAGCCCAACCTGAAGACAAGGAAATCACAAATATCGGTGTGCCACCTATAACTGCCAATGGAGTTGATTTCATGGAAAATTCTGAAGTCTGTACAAATACATATGCTGGAGGGACGGTGGTAGAAGGAGCTTCGGGAATGGAACTGACCACCAATCTTGGAGCAGCTGCAGGATCTGGGGGTGCCGCGGGGTTCGGAGCAACCGCCGGTCTGAGCAACTTTTCCGTGGGACAGTCCGGGACGATGAGAACAAGGCATTCCACCGGAGGAACCAACAAGGACTTTGGGGAAGGGGCAATAAACATGAAATTCCTGGACTCCTACTTTTCTCAGAAAGCATTTGCCTGTGCAGATGAAGACGACAGCCAGGAAGCAAATGACTGCTTGCTGGTCTATGATAATGAAGGAATCGAGGCCCCCAGTTCTCCCGTCGGCTCCCTGGGTTGTTGCAGTTTTATTGCCGATGATTTTGACGAGAGTTTCTTGGACTCCCTCGGCCCCAAATTTAAAAAGCTGGCCGAGATAAGCCTCGGGATGGATGACGAAACCAAAAGCTCTCAGCCGCCTACCAAAGACAGCAGTTCTAGGGTTGACGCCTGTGGCCAACACGTACAAGTCCAGCAGTCAGAGTCTGTTAGGTACCAGACTTTGTCAGGCAGCCAGGGGGCATCTGCGCTGTCTGCTTCCAGTTCTGTCCTGCAGCCCGCCGTTTCCATCACTGACCCTTTGCAGCATGGTAGCTATCTGGTAACGGAGACTTACTCGGCTTCTTCTGGTTCCCTTGTGCAACCTCCCGCTGCCGTTTTTGATCCACTTCTCACGCAAAATGTGATAGTGACGGAAAGAGTGATTTGTCCTACTCCTAGTATCACTGGCAACCTACATGGTCCTACAGAGCTACGAGGATCAGACAGTAAGATCTTTACAGAAGATCCTTCTTCCCGTCTGATATAAGCAGAGTGAACTGGAATTACATACTGGCCAAATACGGATACTTGAACCAAATTATTCAAAATAGCACAGCCAATCTCATAGTATTGGTCTGATTTGGCACTTATTTGCTACTCTTTCATAAACTGGTCATGATTACAGTCTAAATTGTCTAGTTTATACCCCCACACTGGATGTGTGGTCACTCTTACTTCTCAAATTCAAGTCCTAGTAGATCTTAAATGTTTTCCGAAATATCTTAAGATCATATTCAGTGGGAAAATTTCCTAATAATTTTTAAACTTCAAATGCAGTGTGTTTTGTGGATTAAGGACTTGGAGTCAAGACCCCCAGTTCTTGAATTTTTCACCTTTGCTTACATCATTAGTAATGATGTAAGAATCATAAAGTCTTCGCTAAAGCATTTTGAGCTGCTTGGGAAAAAGAAAAATAGTTGCATTTGAACTTCTTCCATCTTCTTGGTGTTGGGAGACCCTAGGGACATCTTTTGCTCAAGCTAAGGGTATTGGTTTACACATTAAACTTGCTGCATCTATATTCCTCATACGCTCACAATAAGACAGTTTTGAAATAGAAGTATCATAGGAAATTTAGGAAAGTTCAGTATGGTGTAAATATTTTTGTGTTTTTTTAAATCACCTTGAAAGGATCTACCTAAAGAAAATATTTTACGTTAACTCCCTCCCTGCACTTCTCAATAACAGCAATCCTGTGTTAATAGTCTTTGAAAATTACTCTTTATTTTTTAAATGTTAGTAGGTAGATGTAACTTACATATGACGTGTAGTGATATTTATCATGTTAACAATGTCTACAGATTCCTAGGAATACAAAATATGGCTTTTCTCACAAGCAAAAGAGGCCTCTGACTAGAGTAACACATAGTGAAATTTGTGAATGTGTATTATATACCGTGTTTCAGGTCAAAAAGGGATATAGAAAGAGATTATGAGTAACAATTTTATTAAGCCTCACTCCTTTTAAATGAAGCTGCTACCACAGTTTAATCCTTGAGTATAACCATGTTAGGTTAGTGACAGCTTAGAATATGTCATTTCACGTGTGTTACCCTGATGACAATGTAGTTCTTCAAGTCATTTCTAATCATTCAAGGTCCTCATCCTTTAGCCCATAGAGAGCACCCTACCTCTTATTAACATTATTGTCTTAGCTGAGACTTTACGAGGTCATTGTTTGGCTCTATTGTCTCTAATTGTATATAAAATAATCTTTTCTGGTTTTTGCCAAATTCAAATCTATATTTGTTTTCAGATGAAAGGCAAAGTATAAAGTGTTTGTGTTTTAACACAGAAGGGTGCAGTCCTAAGGATTCTCGGCGGGGAGGAGACCCCCTAAAATGTCCTTACATCTAGCATTCTTCTCTCTCCCTGGTGTCATGACTAACAGAAAGCCCAAGAAGTACAGGCAATCACTTCTTCCAAGACAAGGCTGCTGTAGCAACAAGGTCTGCAGAGGCCACCTTGAGGTGAGAGGAACTAGACCCTCTGGAGCAGCCTTGCAGGTCCTGAGGAAGTCGCCTTGCTGTTACTTCCGGGGCCTATTCTCAACAGAAGCTTGCTCTGGGGTCTAGAACACACAGAGCTGACTTGTGACTCTGTTTATGCATGAGAATTAAACTAATAATCAGAATAACCCTTGTTCCAAGTTCAGAAGTGTTTTCAGGATCCTCAAGGTATTCTAATATTTCCTCTTAAAATCCAACTCATGAAATGGGAATTTTGCTGCACTGCCAAACTGCAGAGGAAACTATGCCACAGTAGTAAAGTCAAATAAGGGGGAAAGTGAAATTAAAGGAGTTTTGAAAGAAAAGTAGATCACTCTTATCTAAGAGGACCTATAATTTTAATCTGCCATGTAAAATTAAATTCAAAGCAAAAATGTATCTGTATTTTTTCACTAAAAATAAAAACTGTTTTAAGCAGAAAAACTCTTTAAACACTATCTTTTTACTTGATGTATTATAAATTTTAAACAGTATATATTAAAACTTATAGAGTGGTAACATTGTTATAATAAAACTGTTTGGCAACAAATTTATGAGTACTTCCTTAACCATTTAGCAAAAACTGAACTATTCTCTGCAGTTAATAACTATTAAGAAATATGATGTAAGAAAGTGATTGCATGTGTATTTTTATCAGTATTTTTCCTCTTTTTTTTTAAAGCTGACACTTTTTCTGAATCCTCCCCAACAGGAAGTACATGGGGACTTGGGATCTCTTCTTCAGGTGGAAATAGATGTTGGATGAGGTCAGGGCAGATTTTTATTAACTGGATGATTTAACTCATTTATGATCTATTGGGTAATTTGGAGTGGTCTCTCAGGCAAAAATGTTGACACCCTATGAAGACTCAAGAGAGAAAAGGTGGAGAAGGAGAAGGTAAGGTTTATAGCCTAACATGATGACAAAAATGTACCATGACTTTGGTGACAGCCATTAGCCCCTGCAGTGAGTCTGTCTGCCAGTAAATGTCTGAGGTGGCTCAGTGGCAAAGAATCTGCCTGCCAAGCAGGAGACACGGGTTTGATCCCCGGGTTAGGAAGATCCCCTGGAAAAGGAAATGGCAACCCACTCCAGTATTCTCAGCTGGAAAATCCCATGGACAGAGGAACCTGGGGGGCTACAGTCCATGGGGTCACAAAAGAGTCACAAACAACTTAGTAACTGAACAACAACAATAAAAGTCTGTTATTTTTATGTCTTCCTTTAAAGGGATACCACAAAACAAGTCCCTTCAGAGCCTCACATCTTGGTTTCGCTGACCCTCCTCATTCTTAAACACAACTTAAATTCAACTTGGACCTGGGATAAGGTGAGCAGAAACTGGATTCGAGTGAATGTTGTGTGAAGAAAGGTGGATGGCTTAACTCAGATGTCCTAGATCAACCCC EMBV3_02420 GGCGCCACCTATTTCTCCACACCTGAAGTCTCTAAAAGGGATAGTAGATGGTTCCTATCA Gene BVT0102_261762 - 0 NULL GK000019.2:20030249-20177846 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092575 TCONS_00092576 TCONS_00092574 TCONS_00092573 TCONS_00092577 1 XLOC_056924 Coding TCONS_00092573 XLOC_056924 Coding Coding NLK 19:20175763-20262769 j TSS69625 2872 1 TCONS_00092573_6 175 0.137186629526462 6 0.967059364404345 0.00118785983601496 0.0020790139979677 0.000491656436317734 0.000293110618046625 0.00199503045239673 0.0015086719669554 0.000571669106860734 0.000483108575281784 0.000673164518783462 0.000397803352965672 0.000147118942476798 0.000955426562273948 9.14227436889745e-05 0.000222778507785739 0.000285834920601854 0.00074131337909434 0.00130508481482079 0.000173760831218238 0.00330546066033047 0.000625578646183593 0.000824709025166399 2.14662614536512e-226 0.000226472122333425 3.51600188767247e-09 0.000977938793231636 0.00463167373024842 0.000766459601476034 0.000121177779223731 0.00017022460565875 7.04477116829682e-38 NM_001193253.1 NLK Bos taurus nemo-like kinase (NLK), mRNA. 0.0 2156 100.00 0.415738161559889 XM_005257988.1 NLK PREDICTED: Homo sapiens nemo-like kinase (NLK), transcript variant 0.0 1631 90.03 0.415738161559889 TCONS_00092573_6 sp|O54949|NLK_MOUSE NLK_MOUSE Serine/threonine-protein kinase NLK; 2e-96 293 99.34 0.862857142857143 0 noncoding 0 0 0 0 0.0544290828365305 0.642528904053239 0.000533358468942674 0.991778419152132 GTCCAATGGGGTCGCTAAGAGTCAGACATGACTAAGCGATTTCATTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATAGCAAACCACTCCAGTATTCTTCCCTGGAGAATCCCAGGGACAGAGGAGCCTAGTGGGCTGCCGTCTATGGGGCTGCACAGAGTCGGACACGACTGAAGCGACTTGGCAGCAGCAGCAGCAGCACAGGCATGCATTTAGGTAATACTGTGGTAACTGCGGAGAAGGGTGTGTGTGTGTATGTGTGTGTTTGATAGAAAGTGATGCTGTTAGTCGCTCCGTTGTGTCTGACTCTTTGGGACCCCGTGAACTCTAGCCCGCCAGAGCTGATTTCTCAAGGCAAGAATACTGGAGTGGGTTGTCATTGCCTTCTCCAGGGGATCTTCCTGAGCCAGGGGTCGAACCTGAGTCTCCCACATTGCGGGCACAGTCTTCACCATCTAAGCCATGAGGGAAGCCCATGTGTTTAAGTGTTCAGAAGTGTTTAAGACTTGATGATTGATTAGAAGGGAAGGAGTGGGCAGGCAGGAGAGAAATCAATGATGATTTCCAGGGTTCTGAGTGCACAGTTTTAGTAAGGGTAAGGTCTGTAAGCTTATTATTTCGTATTTTTAAAGAAAAGTAGATTTAGGTAAGTGAGGTTATGTGAAAGTAAACTTTATTTTAGTAAACTTTCAATGACTAGAATTTATTAGAAAGTATGGGATAGAATTTATTAGAAAGTATGGGATAAAATTACAGTCTTTGTGGTTAGGTTTATTATTTTTGTTGTTTTAATTATATCTATAGGCCTATTGTTCCATGAGCGTGTTAGTTGTGAAAACTGGAAATAATGTCTTTTTGCCACTAAGAGGATTAGCCATGGAAGACCAGCTGTAGGTTATGAACCATCAGTCTTTGAGTTTCTTTTGTGATCGCCCTGATGAATAACCTTGATTGAGTTTCTGAAGCTCGACATCCCCTCTTGGCGCCACCTATTTCTCCACACCTGAAGTCTCTAAAAGGGATAGTAGATGGTTCCTATCAATGGATGATTTGGACTCCGCCTTCTTCCTCTAGGTCCCGCCCTCTTCCCTGAAACCACACCCCCTTTCAGTTGGCCCGCCCCTTGAGGAGGTCGTCGCTGATATGACAGCGATTCTCCACAATCCTGACCTATAGGAGATCGGAAGGGTGGGACCGAAATCAATTTCCTTTTTCATTTGTCAAATCAAATGTCTATCTGGTTCCAGTCTCAGCCCACTTCCTCTTCAAGCCAATGATTGGTTGCTCTGTTTTTGCTCCCCGGCTCACGATTGGTTCTTTCGTTCCAACCCTCTCTTCCAGCTTTTGCAGGCGGGATTAGCACGCAGCTTCCTGCTCCTTCACTTTGCCCCGGTTCTCTTTCTCCTCTCTGTCCTGCCCTGTCGCCTCCTCTGCTCACTCTGTCCCTCCTGCCTCCTTCCCTGGCTCTTTTCTGTTCGGGAAAGTTTAGTCCCCCCCCCGCTCCAATCAGGTCAACCTGACGAGGAGTAGGGGGAGATGTAGGAAGGCCTGAGAGTTCGAGGGGGGGGCAGCTGGTTTCCCTGAACATTTCCCCCCATCTTTTCACTTTGGGGTGGTGGAATTTTTTTCAGTTGCATTTTTGAGGAGGTGGTAGGTGTTTAGAAAAGGATGTGGGAATGGAAGGGGTAGATGAGTCAAGCCTCTTACAAGATTCCAAGGGTGGTGTGTTACCTGATCCTTTTCGCGTGTGGAGTTCAGGAGGTCGGGAGGTTTGGCCTTCATTCCCACATTCAAAGTTGGAACCTCCCCCGAATTAAGCATGGAGTTTTAGTATCCACTTGTGGCAGGAAACCTGGGGGGAAGGGGTCCCTTTTTCCTTTTTCTTTTTCTTTTATTTTTTTGGGGGGGCAACCCACACCCTTCCACACACGCTCACCCCCAACTTAAACACCAAGATCCTCTAACTTGTCTGGATTGACTGATGAAGACATAAAGCCAGTTCCGCTCCATGTTTTTTGGAGGTGGAGTGAGTGGTTTTTTCCTTCATTTTTAAATGGCCAAATGACAGCTTGACCCAGTTTGCTTTCCAATCAAAGGGCATTTTTTTTTTTGAATGTCTCTTTGTGGCGCAAGAGCCAACGCAAAAATGATGGCGGCTTACAATGGCGGTACATCTGCGGCAGCAGCAGGGCACCACCACCACCATCACCACCACCTTCCACACCTCCCTCCTCCTCACCTTCACCACCACCACCACCCTCAGCACCATCTTCATCCCGGGTCGGCTGCTGCGGTCCACCCCGTGCAGCAGCATACTTCCTCGGCAGCTGCGGCAGCCGCCGCCGCAGCCGCAGCTGCAGCCATGTTAAACCCTGGGCAACAGCAGCCTTACTTCCCATCACCGGCACCGGGTCAGGCTCCGGGACCAGCTGCAGCAGCCCCAGCTCAGGTACAGGCTGCCGCAGCTGCCACAGTTAAGGCGCACCATCATCAGCACTCGCATCATCCACAACAGCAGCTGGATATTGAGCCGGATAGACCTATTGGATATGGAGCCTTTGGTGTCGTCTGCAAGCAAATTCTTTTGGAATTCTATCAAAACATAAGGAAGATATTATGTATACTCCTCTCTTCAGAATGAACCAGTGGCACAAAGAAAGGTCAGTAACAGATCCAAGAGATGGAAAGAGAGTAGCACTCAAAAAGATGCCCAACGTCTTCCAGAATCTGGTCTCTTGCAAAAGGGTCTTCCGGGAATTGAAGATGTTGTGTTTTTTTAAACATGATAATGTACTCTCTGCCCTTGACATACTCCAACCTCCACACATTGACTATTTTGAAGAAATGAAAGAGGTACCAGCAGGTATT EMBV3_02511 GCAGCTTCCCAGGGGACAGATGACTCCCCTTATTCATCAAAATTCAGAACACGGGAATGC Gene GeneID:100297214|LOC100297214:XM_002707898:189_cdna Constitutive 0 NULL GeneID:100297214 10 GENE LOC100297214 NULL hypothetical protein LOC100297214 EMBV3_33273 GAGGGACTAACAGCCTTTGACCTCAAGTCTTTTGTCTGTTGGAGCTTGGCTGAAGTTCAG Gene BVV0101_089249 + 1 EMBV3_20258 GK000024.2:35564668-35565043 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140118 TCONS_00138870 TCONS_00138867 TCONS_00140116 TCONS_00138868 TCONS_00138869 TCONS_00140119 TCONS_00140120 TCONS_00140117 TCONS_00138872 TCONS_00140121 TCONS_00140123 TCONS_00140122 2 XLOC_085065 XLOC_084755 Coding TCONS_00138867 XLOC_084755 Coding Coding USP14 24:35524134-35565134 j TSS103982 2810 1 TCONS_00138867_2 420 0.0594306049822064 17 0.931876387228957 6.35733492835487e-11 1.40618036116144e-37 9.70703169709894e-12 8.82943441256065e-05 1.75126092520226e-13 2.56549044086554e-54 9.8362726485674e-08 9.08085559738861e-78 3.25708264747398e-35 1.52695510215171e-05 1.09909492679206e-12 8.58337761205177e-05 3.72038612813965e-17 8.27267388055728e-06 5.82308712670591e-78 0.00487726743516307 0.00570707203233071 0.00752477785633097 0.000103180463055091 2.24898524321278e-08 1.02924613009425e-89 0.0026330172066795 0.00228111747359608 0.00318146815125047 3.21069977256575e-17 1.8616377153307e-18 4.38904595379162e-23 6.46944103303315e-06 3.45111967657054e-13 3.83409852655732e-08 XM_005224119.1 USP14 PREDICTED: Bos taurus ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) (USP14), transcript variant X1, mRNA. 0.0 4607 99.84 0.912455516014235 NM_005151.3 USP14 Homo sapiens ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) (USP14), transcript variant 1, mRNA. 0.0 3124 87.93 0.881138790035587 TCONS_00138867_2 sp|Q0IIF7|UBP14_BOVIN UBP14_BOVIN Ubiquitin carboxyl-terminal hydrolase 14; 0.0 862 99.76 0.992857142857143 2 coding 0 0 0 0 0.0259602671413665 0.812212661292192 0.00410274448342136 0.930780935956624 GAGCAACCATCTCCCCCCGACTCCGTCCCCCGCTTATATTCTTCCTGTGGGCTGAGACCCAGAGATTTTAAATGAACATATCCTGGTTAGGAGGCCAGTGTAACCACAAGCGGCTTTATAAAGAGGGAGGCAGAGGCTCTGAGTGAGAAGAGTTGCTGGGCGGATGCAAGCCGAGGTCAAATGGTGCCTTGGCTGGAGTGGGGCCAGAAGACGAGGAATGTGGGGAGCCTCTAGAATCTGGGGAAGTTACTGTGAAATGGGGAAAGGAGAAATTTGAAGGTGTAGAATTGAATACTGATGAACCTCCGATGGTGTTCAAGGCTCAGCTTTTTGCACTGACTGGAGTCCAGCCGGCCAGACAGAAAGTTATGGTGAAAGGAGGAACACTGAAGGATGATGATTGGGGGAACATCAAAATGAAAAATGGAATGACTGTACTAATGATGGGGTCAGCAGACGCTCTTCCTGAGGAACCCTCAGCTAAAACTGTCTTTGTAGAAGACATGACAGAAGAACAGTTAGCATCTGCTATGGAGTTACCATGTGGATTGACAAACCTGGGTAATACTTGTTACATGAATGCCACAGTTCAGTGTATTCGTTCTGTGCCTGAACTCAAAGATGCCCTTAAAAGGTATGCAGGCGCCTTGAGAGCTTCAGGAGAGATGGCGTCCGCACAGTACATTACTGCAGCCCTTAGAGATTTGTTTGACTCCATGGATAAAACTTCTTCTAGTATTCCACCAATTATTCTACTGCAATTTTTGCACATGGCTTTTCCACAGTTTGCAGAGAAGGGCGAACAAGGACAGTATCTTCAGCAGGATGCTAATGAGTGTTGGGTACAAATGATGCGAGTATTACAGCAGAAATTGGAAGCTATAGAGGATGATACTGTTAAAGAGACAGATTCTTCATCTGCATCAGCAGTGACACCTTCTAAAAAGAAAAGTTTAATTGATCAGTTCTTTGGAGTTGAATTTGAGACGACCATGAAATGTACAGAATCTGAAGAAGAAGAAGTCACTAAAGGAAAGGAAAGTCAGCTTCAGCTTAGCTGTTTCATCAATCAAGAAGTCAAGTATCTTTTTACAGGACTTAAGTTGCGACTTCAGGAAGAAATCACCAAACAGTCTCCAACATTGCAAAGAAATGCTTTGTACATCAAATCTTCAAAGATCAGCCGGTTACCTGCTTACTTAACTATTCAGATGGTTCGATTTTTTTACAAAGAGAAGGAATCTGTGAATGCTAAAGTTCTTAAGGATGTGAAATTTCCTCTTATGTTGGATGTGTATGAACTATGTACACCAGAACTTCAAGAGAAAATGGTTTCTTTTCGATCAAAATTCAAGGATCTAGAGGATAAAAAAGTAAATCAGCAGCCAAAGACAGGTGACAAAGACAGTAGTCCCCAAAAAGAAGTTAAGTATGAGCCCTTTTCTTTTGCTGATGACATTGGCTCCAATAATTGCGGATACTATGATTTACAAGCAGTGCTAACGCATCAGGGAAGGTCTAGCTCTTCAGGCCATTATGTATCATGGGTGAAAAGGAAACACTTTAGATGAATGGATCAAGTTTGATGACGATAAGGTCAGCATTGTAACACCAGAGGATATCTTACGACTTTCCGGTGGTGGAGACTGGCACATAGCTTATGTTCTACTCTACGGGCCTCGCAGAGTGGAAATAATGGAAGAGGAAAGTGAACAGTAATCTTCATTTTAGCTATTTATGCTTAGGTGTGAAATAAATGTTATTTGTTGATCATTTCTATAACCCAGAGCTTTGGAGGAAGATTAGTTTAGGTGGTTTTATGTGTTTCCCCTCATGTGGAACAAGAGAGGGCAGAAGCAGACCACTCTGTGTTACCAACCTAAGAAATTACAGAAAAGAGAAAATTGCCTTTGGACTGTGCTGCCCTGTGTAAAGGTGGCAGGAAGAACTTTTTAAAAAGCTTATTGCTTGGATTAATTTTTAAAAATTATGAGTTGAAATGCCTTTCAACCATTATTACCTTCTGTGATAATTTTTCTGTCTTTTTCAGCCCAAGATTCAGCAATCAGATGTTTATTGCACACCTATTACTCTATTATTTGTTGTTCTTGCATGGTTCAAACCACCAGTGATCCAATAGCTGCCCATCCTTTGCCTTATCTAACACAAATGTTGCCAGGAAGGTGGAAGGAAGTAAGTTTGATCTCATTGTGTAACTCAGTGCTGCGTCCCCACCCCCATGCAAACATGGGTACAATCAAGTATTTGTCCAGCCTGACTGTTGCTGGCTTTTCATGACTTTAAAATAAATTGTGATCAAATAATAGTACATTTGATTATACATTTGTTACTGTGTCTCTGATGTACTATGGTTTGTACATTGAACTTTGCTATGGTTTTGTAGTAATGAACCTTAAAATGTTGACAAGCTCCAGTTGCTTATTTTTAGAAAATGAGGATATTTAATAAAAAAAGAAAAAAGAGGGACTAACAGCTTTTGACCTCAAGTCTTTTGTCTGTTGGAGCTTGGCTGAAGTTCAGATATGTTTAATACTATTATAGTTTCTGCAGATGGTTAATTATGCTCTCAAGCATCTATCTGAAAATAGTATCTTCTTCACCTGCTAGCCTAATACTGTTTAAAAAGAAACACAAAGTTGTGATTGGATAATGAATGCAACCATGTTTATCAGATCTGTTCTTTGGCTCAGTTGGGTGTTTGGTTCTACTCTGTCAACTCCCAACTTCATGTCTATCTCAAAATTTAATACCAGTGATTTTTAGGAGAAATATCAAGAGTATGAGATACT EMBV3_12791 CTGGTGATAGTTTCTCCTCGTTTGATACTCGGCTGTTGATAATCAGGTGTACGTGGCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17380 AGAGCCTGTTAGGACTGAAGGTATTCATAAGTGCTGAGTCTTTTTGTCTGAGTTAGTAGG Gene BVT0101_007463 + 0 NULL GK000030.2:60958779-60966170 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247124 TCONS_00247125 TCONS_00247126 1 XLOC_151235 Coding TCONS_00247126 XLOC_151235 Coding Coding PSMD10 X:60963782-60973603 j TSS185145 3478 1 TCONS_00247126_3 269 0.305635422656699 5 0.646334012219959 0.000403817221971027 0.00034610492397881 9.57025661303468e-09 0.000196182731190747 0.000422944715030275 8.78038401370241e-05 0.000418639828148327 0.000634188487521851 0.000442399294109832 2.68169617083891e-06 0.000110248072715834 0.000133225277427715 1.82533327270953e-07 0.000538466673165956 0.000190320125821418 0.00931650174112629 0.00425701267137809 0.00590760587290429 0.000173914277508953 0.000102962554591092 2.21430101893832e-05 0.00420272122653973 0.00276001377257946 0.00474417908807062 0.000219425516799398 0.000184119024532627 0.000111401270268198 0.000392785662943167 0.000247965274203384 3.23822400589445e-07 XM_005227878.1 PSMD10 PREDICTED: Bos taurus proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (PSMD10), transcript variant X1, mRNA. 0.0 1893 100.00 0.30132259919494 NM_002814.3 PSMD10 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (PSMD10), transcript variant 1, mRNA. 0.0 1676 84.01 0.441633122484186 TCONS_00247126_3 sp|O75832|PSD10_HUMAN PSD10_HUMAN 26S proteasome non-ATPase regulatory subunit 10; 4e-165 461 99.11 0.83271375464684 5 coding 1 1 1 1 0.659052352424818 0.21899760412063 -0.0134771421418401 0.771440930183259 CCGCCCGGAACTGCGCTCAGACTGCAACTCCCAGAGGCGCCCTGCGATGGGAAAAGCAAAGGAAGAAGAGAGGATGGTGATTGGTGGAGCTCTACGGGCTCTTTTGATTAGCGCTCGGAGCCTGCGAAGTGAGGAGGTGGTGGATCTGGCTGCACCGAGATCCTGGGAAAGCGAAATGGAGGGGTGTGTGTCTAACCTAATGATCTGCAACCTGGCCTACAGCGGGAAGCTGGAGGAGTTAAAGGAGAGGATCCTGGCGGATAAGTCCCTGGCCACTAGGACTGACCAGGACAGCAGAACGGCGTTGCATTGGGCATGCTCAGCTGGACATACAGAAATTGTTGAATTCTTGCTGCAACTTGGAGTGCCCGTGAATGATAAAGATGATGCAGGTTGGTCTCCTCTTCATATTGCTGCTTCTGCTGGCCGAGATGAGATTGTCAAAGCCCTTCTGGGAAAAGGTGCTCAAGTGAATGCTGTCAATCAAAATGGCTGTACTCCCCTACATTATGCAGCTTCCAAAAACAGGCATGAGATTGCTGTCATGTTACTGGAAGGTGGAGCTAATCCAGACGCTAAGGACCATTATGAGGCCACAGCAATGCACCGCGCAGCAGCCAAGGGTAACTTGAAGATGATTCATATTCTTCTGTACTACAAAGCTTCCACAAACATCCAAGACACTGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAAGAGAGAGTGGAAGAAGCAAAATTGCTGGTGTCCCAAGGAGCAAGCATTTACATTGAGAATAAAGAAGAAAAAACACCCCTGCAAGTGGCCAAAGGTGGGCTGGGTTTAATACTCAAGAGAATGGTGGAAAGCTAAGCAGCTTGGATTTAGTCTTACTTTGTTTTGTGGCTGTCCCCTAATGTACTGGTAACTAATGTACTTGTGCACAAGACATCATCTATGAATGATGAAGTTTTTTCATCTCCTAAGTCTTGTAAACATGTTTACTATTGTTCCTGCTGAGTTATTTGTTCTTAGCTTACAACTTGCTTTCCAGGCATTGAACAACTGTTGACATTGTTCTACTCTAATATATTATTCTGTATTGAATTTTGGTTACGTCTGTGCAAGTGATTCTGTGGCTATTGTGAGTCTTAAGCACCCTATCACACACCCTCTATCCCCCTTTGAGGCAGAACAACCCCAGGAGCACCAGGCCAATTGTTCTGCTAAATGTTTCTAGGTAGATTCTAGAATGTTCCTCCATACAGTTAAAACACATCATAACTCATTTTTCAAGATCACTCAGAAGCCTATGCCACATATTTCTGTTTTTTCCGACAATACGGTTTAATTTGTTTTTGTTATCGGAAGAATACTTACATCTTGTGAGGACCAAGTTTTCGATTCGGGGATGCTGTCCAAGTTTGGCATTCAAGTACCAGTGTCTTTTTTAATGAGCTATTTCCCTCCAAAGTAAATTTAAAAAGAAAATTTTAAAGTACCTATATTAAATCACACCATATTGAAAAGAATGTCAAGTTTGTTACCATGATGTATAACAAAAATGAATTTTTATTTGTATTTCAGCAGCTAAAAGAATAAAATGCTGAATCTCCTGATTCTTCTTTCAAATCAGTTAGATACTCACTTAAGCCTTTAAAGGCTTTATAAAGATACTTTCTTAATTTTTGGTAACTCTAAAGTCAGTAAAATTAGTGAAGCTTGAACTGCAGCTAAAATATGTAAAAATCTTCTGAATTGCTAATTCAATTGGAGCAACAGAAAATTAATAAGTATAAACTTGATCTCAATTTAGGGAAACATTTTAAATGATTCAGTTCAGTTCAGTTCAGTCTCTCAGTCGTGTCCGACTCTGCGACCCCATGAATCACAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAAACTCATGTCCATTGAGTCGGAGATGCCATCCAGCCATCTCATCCTCTGTCATCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCACAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGAGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAACACCCAGGGCTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGCGCTCAGCCTTCCTCACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTGATATCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCATTCCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGACTTTGGAGCCCCAAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACCAGATGTCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTTTTGAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTAAGGTTCTTGATATTTCTCCCAGCAATCTTGATTCCAGCTTGTGCTTCTTCCAGCCCAGAGTTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAGTATACAGCCTTGAAGTACTCCTTTTCCTATTTGGAACCAGTCTGGTGTTTAAATGATTACTAGCCATAAAATCTAATGAACTCCAAGTGACTCTTCTAATTATTTTTATTTGAATTTTATGCTGCAAATAGTGCTTGAAATAAGTAATCCAAATGAGTCCACAACCTTCAATTAATTTGGGGTCAGAAACTTAATGAATGGTATCTAAAATGGGTTTTGTAAACATAAATGTGTTGTTGATATGCAAAACCCTTTTACGTAAGTATTTTGAGTGCTGAGCTTTACAATTATTAATCAGGGAAGCATATTCTTATAGAACTAGACTTTGTTTATTGAATGCTAGAGATAGAATTGATGATGGGAAATAATTTCTTTCTAACGTTTTTTAGCGTGATCACAGAGTAAAGTTGTATCTAATAGAGCCTGTTAGGACTGAAGGTATTCATAAGTGCTGAGTCTTTTTGTCTGAGTTAGTAGGTTTTATGAATGTAAAAGAAAACTCATCTTAATTCTTTAATAAACAATACGGATGAAACCAAGCCTCATGTAATTTGTATGCCTTTGGCATTTTATTCTATTTTATTTTTTTGCCTGCATCATGTGACACATGGGACCTTAGTTCCCTGACCAGGGATCCAACCTGCATCCCCTACATTGGAACTGTGGAGTCTTAACCATTGGACCACCAGGGAACTCCCTATTGGCATTTTAAATGAAGTGGCTTAACATTTCAATCACTAAAACTGAGGGTATTGATGGCTTCAG EMBV3_17621 TGTATTGAGTTGCACATGAGTGTGACGTTAGTATGCGGTGGGGTTAACATCTGAAGTGTC Gene GeneID:516044|NSUN2:XM_002696449:44_cdna Constitutive 0 NULL GeneID:516044 20 GENE NSUN2 NULL NOP2/Sun domain family, member 2 EMBV3_36968 GCTATGTCCATGGGGTCACAAAAGAGTCTGACACGACTTGGCGACTAAAGAAGACCATGC Gene GeneID:506017|RBM12B:XM_002692820:156_cdna UTR3_Alt 1 NULL GeneID:506017 14 GENE RBM12B NULL RNA binding motif protein 12B EMBV3_08629 TCTTCTCTCTTCACCGGGTTCCAGGCGCGCTTCCAAACAGAACTGCTCCGCAATCTGCCA Gene GeneID:540051|ACTL9:NM_001038569:84_cdna Constitutive 0 NULL GeneID:540051 7 GENE ACTL9 MGC134305 actin-like 9 EMBV3_22065 GCAGAATCTCAGGGGGAAGCTGGCCTTGGGGAAATCTACCATTGTCGAAGACAAATAAAG Variant GeneID:614639|MRPL22:NM_001035454:26_cdna 100^217 2 EMBV3_01716 GeneID:614639 7 GENE MRPL22 MGC127975 mitochondrial ribosomal protein L22 EMBV3_16415 CACCTGGATCCGATTTAGCGTCTGGATGGCGCTTGGTTTCCTGATTTACTTCGCTTATGG Gene GeneID:538708|SLC7A2:XM_002698665:138_cdna Constitutive 0 NULL GeneID:538708 27 GENE SLC7A2 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 EMBV3_02261 ATGTCGGACTTGCTAGGGGCATTGCTGTCCAGATGTATTGGAGGGTTTCCATGTCTTGCC Gene GeneID:539974|NLRX1:NM_001102235:196_cdna Constitutive 0 NULL GeneID:539974 15 GENE NLRX1 MGC160060 NLR family member X1 EMBV3_00116 CTGGCCTAACAACTCTCTATCCCTTAAAACTCCATCTGACCATCAGGCCAACTTAGATGC Gene BVT0102_040305 + 0 NULL GK000003.2:92309037-92411759 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25296 AGCTTACAAAAACTTGGTAACTACAATGGCTACTGCTTGCTGTGTGGGCAGTGGTATCTT Gene BVV0102_101627 + 0 NULL GK000013.2:46684276-46689062 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24544 CCAACAGCACCTTTGTTGAATGGCGGTAGCTAGGAGGACTGGGGTGAAGGATGATGTCTT Gene GeneID:509715|CTSF:NM_001075416:557_cdna Constitutive 0 NULL GeneID:509715 29 GENE CTSF MGC140519 cathepsin F EMBV3_05062 TCAGTCCTGCTGTGCTTTAACAGGAGAAGGGTTATGCCAAGGTCTAGAGTGGATGACCTC Gene GeneID:616679|ARL5B:XM_002692085:269_cdna Constitutive 0 NULL GeneID:616679 13 GENE ARL5B NULL ADP-ribosylation factor-like 5B EMBV3_12020 TTGGTAGGAATCACGAAGTGTCTGAAAAACCTGACCAATCCATCGTCCACTGCAGCCAGC Gene BVV0101_013272 + 0 NULL GK000004.2:120306900-120326812 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185563 1 XLOC_111618 NonCoding TCONS_00185563 XLOC_111618 NonCoding NonCoding - 4:120323396-120326466 - TSS137932 1427 2 TCONS_00185563_1 55 0.276103714085494 2 0.535679374389052 0 0 0 0 0 2.50669390150345e-06 0.000183901132446032 0 0 0 0 0 0 0 0 0 0 1.75829883932888e-05 0.000115579074585928 0.00121452988108221 4.25469877854358e-06 1.56005771732818e-05 7.71469600613113e-05 2.3496319449221e-05 9.22502677997836e-05 1.48117816725044e-05 6.98006759520376e-05 0 0 8.42641106401756e-06 XR_232928.1 LOC101906877 PREDICTED: Bos taurus uncharacterized LOC101906877 (LOC101906877), 8e-17 93.3 78.76 0.0735809390329362 NM_020183.4 ARNTL2 Homo sapiens aryl hydrocarbon receptor nuclear translocator-like 2 (ARNTL2), transcript variant 1, mRNA. 4e-08 64.4 78.41 0.0602662929222144 0 noncoding 0 0 0 0 -0.0570587959375134 0.724448794637965 0.0197681193259354 0.701958004081933 CCTAGCAACCGACTGGCAGGCCCGCGAAGCCCAGAGCTACTGCTGGGCCGGGATTCCCGTGGGGCCGAGGGGAAAAGGGTGCGGAGCAGGGCAGAGCGCGGCCGGAGCTCGGCCCGGCGGCTCTCTGGGCGGGGAAGCAGCCGGGCAGAACGGGAGCTGCTGCAGGGAAACGGGCAAACCGCCTTTTGAAGCGGAGCGGAACCCAGCCTCTGTCCGGGCGGGCGGCGGAGGGCGCTCTCCTTCCGCGGAGGCGCGCACTGCTCGAGTTCCTCTGCCCGTGGTTGCCGTTTGACTCCGTGCGGGATTGGTAGGAATCACGAAGTGTCTGAAAAACCTGACCAATCCATCGTCCACTGCAGCCAGCAATCCAACAAGTGACACACTTCAACGCCCTGCTTCCGACTCCATCTGGCTCTCACCCACTTGCACTCTTTGTCACCAAGCAGACTGACTTAGGGTTCCCCAGATGCACCATATTCACAGGTCTTTGCAAGTGCTATCTCCCCTCTCTCACCGTCCCCACCATATGTGCCAAATAAATATCCATAGAGGAAGTTAAAACAGTTTTTCTCTCCTTGGACCTCTTAGAAGAATTCTTTTCTAAACAATTCATTTGCCAATCACATTTTATCTTGTGATAGTTCTTCTATCACTTTATTCACTAGATGACTCTCTAGTTTATTTGATGACGTGGGAACTCAATGCTGAAGACAGATGAATAAAACACTGCCTGGGAGACATCCCTGGTGGTCCAGAGGCTAAGACTGCACTCCCAGTGCAGGGGGCCTGGTTTCCCCCAGGGACCCAGACCCCACGTGGAACACCAAGATCAAAGATCCTGCACACCACCATTCAGACCTGGCGAACCAAGTAAATAAGTGTTTCTAAGAAACGCCGCCTGGACCTCCAGCTTCTCATAACTGCAAACAGTAATTAAACAACATGAAAGCGTAAGAGCGACTCATAAAAATGCAGTGACTGAGGAGGTGACAAAGTCTGCCTGCAGGAAAGGAACGAGTTTGGGAAGGGCCTCCTTTCAGGTGGACCCTGAAGCACAAACAACCTACAGGCAGAGACGCACAGAGAACATCTTAGGCAAGAACAAACGTGGGGCAAGTGCACAGGAAGGGAGGGAAGGGTCTGGAGGGTTTAGGAAATGTAATAACTTGTCTATAGCAGAGCTGCCCAATAGAAATATAATACGAGCCACAGAGTCATTATAAATTATCTAGTAGCCACATTTTACAAAGTGAAAAACAGATGAAATCAAATATAGTATTTAACCAAGTATATACCAATGTTATCATTTTGTCACAGAAAATATGTTTCAAATATTGTGTTGTTTTATACTTTTTTTATACTGTCTTTGAAGTCCAGAGTGTTTTTTATACTGACAGCACACCTCGGTTCAGACTGGCCCCTTTTCC TCONS_00183050 TCONS_00183051 r 5' 2181 TCONS_00183050 TCONS_00183051 r 5' 205 EMBV3_09245 ACATAGGACCTCTTTTGTGTGTCGTTACCTGCCATACTTCCCAGTCTCAGTGGTTGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24826 TGTGACTGGATCACATGGGGAAGCGCTTATACAGACATCAGTTCCATGGTGTTAATTTGA Gene GeneID:509992|ZNF608:XM_002688983:40_cdna Constitutive 0 NULL GeneID:509992 7 GENE ZNF608 NULL zinc finger protein 608 EMBV3_38418 GCTAGGTTAAGCACCTCTCCTTCGCCCTGACTCCCATCACTGTCTCCATCCCCAAATAAA Gene GeneID:514244|LOC514244:XM_002691050:453_cdna Constitutive 2 NULL GeneID:514244 10 GENE LOC514244 NULL similar to rCG20598 EMBV3_17103 AGCGGGGGGCTGCCCTGAGCCCGTTTTTCATGCGCTGACTTGTACAATTATCTTTTCAAA Gene GeneID:504357|AXIN1:XM_002697898:496_cdna Constitutive 0 NULL GeneID:504357 25 GENE AXIN1 NULL axin 1 EMBV3_09886 CTGACGTGCTGTGGCAGATGGGCTACACAGGGTTGGGCCATGGCACGTTCGTGGCAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20744 TCAAAACTCCTCTGCTGGGGGCTTCCCTGGTGGTTGAGTGGTAAAGAATCCATCTGCCAA Gene BVT0102_059807 - 0 NULL GK000024.2:38293884-39144852 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138961 TCONS_00138962 TCONS_00138960 1 XLOC_084773 NonCoding TCONS_00138960 XLOC_084773 NonCoding NonCoding - 24:38723912-38733360 - TSS104030 2821 1 TCONS_00138960_3 131 0.405529953917051 2 0.701598391023605 0.000604867536360439 0.000462108010501224 0.000666740541734385 0.000174583461676897 0.00118594038187408 0.000403869439987365 0.000482296953873847 0.000371111006010437 0.000357013160899139 4.15037621690169e-10 0 5.40468571757538e-29 0.000242566000396754 1.50073472173534e-05 3.4327002032324e-34 0 0 0 0.000280407023259499 0.000209007109092238 1.7400758150343e-05 0 0 0 7.80513070187454e-33 0.000429465962722104 0.0005215391279944 0 1.10469008615507e-20 0 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 2e-90 338 95.75 0.0744416873449131 TCONS_00138960_3 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 6e-06 45.4 48.08 0.366412213740458 0 noncoding 0 0 0 0 -1.61686046566958 0.0252090427534665 -0.129544589199497 0.0544031672281 GCCAACGCTCTGACAGCACAATTAGCTCCAAAGTCTGAGATGCTTAACTTTTTCAAATTACAGGTGTAGGGGCTTGGTTAAGAGAAACAGGTAGAGAAGCAGGTCAGCATAGAGAGAGTCAGCTATTGGAGGAATTAAAAAAAAAAAAAAAGTAAAGAAAGCTTGAAGGTGCGTGGAGCCACAGCTCCTATTCTGTAAGCATCCTGGATTTCCCAAAACCTGTCTGTTCTCCTTCTGTGCATAATTGTGTGTGTAAGTACAGCCTAGTTATTACCCATTCTAAGTAGCAATTTGATGTGAGCTAAAAGCTCTAAGTCGAGTCTCCGAATGGCTCTGAGAACATCACTGTCAAAGCCAGCTCTGTCTACAGAAGGCCCTGGAATGCCAGCAAACCCAGGATCTGCCCCATATACACGGGCAGCTACGAACAGCAGTTCTCTTCTGCAGCACCTTCTTCTACTTGCTGGGTCCTGGCTACATCTTCCCAACCTATCTGGTTATCAACCTCTAAGCATCCCAGCTCCAGTCAAAACTCCTCTGCTGGGGGCTTCCCTGGTGGTTGAGTGGTAAAGAATCCATCTGCCAACGCAGGACACACGGGTTCAATCCCTGGTCTGGGAAGATCCCACATGTCAAGGAGCAACTGAGCCTGGGCGCCACAGCTGCTGAGCCTGTGCTCTAGAGCCTGGGAGCTGCAACCACTGAAACCACATGCTGCCGAAGCCTGAGCGCCCCAGAGCCCGTGCTTCACCAGGGAAGTCGCCACAGTGAGAAACCCGCTCCCTGCAACCAGAGAGTAGCCCCCACTCATAGCAACCAGAGAAAGCCTGCACACAGCAACACAGACCCAGCACAGCCAAAAATAAATTAATTAAAAAACAAAAAACTCCTCTGCTAAATGGCTCTCAGGTTCGGGGCTCTAAAGACACCAGAGATGGCCAGTGTGGAATGAGGAAGGCTTCCTGACAGACACCAAAGTCATAGGACTCTTTGAGGAGGAAAGGGGCAGAGATCTGGGATGGTGATGAAAATTTTTTTCAACCAATGGTTTCTTATTTCTACCAGCCTATCCAATCTAATCCAATCACTACCACAGCCTTGTCTAAGTCAATGAAACTAAGCCATGCCCGTGGGGATGGGCGGGTCATGGTGGAGAGATCTGACAGAATGTGGTCCACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCCATGAACAGAATGAAAAGGCAAAATGATAGGATACTGAAAGAGAAACTCCCCAGGTCATTAGGTGCCCAATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAGTGAAGGGATGAAGCCAAAGCAAAAAGAATACCCCACTGTGGATGTGACTGGTGATAGAAGCAAGGTCCAATGCTGTAAAGAGACTCATTGGAAAAGACTCTGATGCTGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGAGGGACGTGAGTCTCAGTGAACTCCGGGAGTTGCTGATGGAGAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCTCAAAGAGTCAGACACGACTGAGCGACTGATCTGATCTGATCGGTGTTCCAGGACATTCTACTAGGAAAGAACAGACAAAGCTTAATGATATACAGCAATCAGTGTAAGCAAATGAAATGTCATGTAATAGCATTAGATAAGACAGAAGTCAGTTCCTGCTTAGTTTGAAATAGTCTGATTTTTTCCTATGAAGACAGTTTTCCCTCCTAATAATTATGTAAATGAGTTTGCATTTAGTGAGCACATGCCAACTGCTCTGTGAGACAGTAAGAAAATGTGGCAGGTAGAAGGAAGAGGTGAGAATAAAGCTTATAAAATAAATAAATATGTGTGTGTGTGAGTGTGTGTATATACATACATATATATATGTATACACACACTTCATAAGCAATAGGTAATTGAAGCTTCAGCATCAGTCCTTCCAATAGAATATTCTGGGTTGATTTCCTTTAGAATTGACTGGTTTGATCTTCTTGCTGTCCAAGGCACTCTCAAGAGTCTTCTCCAGGACCACAATTTGAAAGTACCATAAGCAACTTAAAAAAAAAAAAAAAAAAAAGAAACTTCTCCCCATGCTTACCTATGATCTTGAAATAAAAGCTAAAAATAGGAACAACAGTATCCTACCAGTTTTTTTGAGCAAATTGCTGAGATAATGAATAACCCTGATGTAAAAGTACCTTCACTCTCCAGAAACAGAACAGGAATATCAGAGATCTACTTAACACGAAATATACTCAGTTCCACACAGTTAGAAAAACATTCACATCCATAAGTGGAATTTCAGTGTTTGGTACAGTTAGTGGGTGAAAAAGAAAAGGGAGTTTTTCTACACAATTATTAATGATAATACAACTTGAAACTGGATTTGCATCATTACCCAGAAGCCCGCAGTCAAGCAGGAATGCCAACGCCACAGATATTCCCTGATGGGACCCAAGTCACAGGGCAGCACCTGGCCTGTCTCCCAAGGTGGTCAACACAAACAGTGGATTTACCTCATTTCCTTTGGGTCCTTCCTGTAATGTGAACACGGCACAGAAAGGCCCGCCATTAATTGAGAAGGGAAGGGAGGAAGAGAGCCCCTTGTTTCCTCAGGCCAGCAGTGCCTCAGGCACAACTCGAAAAACAAGAAAATAAATATTTTTCAAAGCGCCAACTTTCTGTCTCAGAAAAACGTGTTGCTGTCTAATAATTTAAAAACTATAACCACAGGCACGGATGGTGGGGAT TCONS_00140179 r 5' 1405 TCONS_00140179 r 5' 1405 EMBV3_13516 GCATATAATCAAATGGGGGCACTCTGTCCAGGAGAATAATCCGACTGGCATTTGTGGCAG Gene BVT0102_066455 + 0 NULL GK000003.2:104612387-105213469 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179796 1 XLOC_109566 NonCoding TCONS_00179796 XLOC_109566 NonCoding NonCoding - 3:104622096-104623256 - TSS134555 1160 2 TCONS_00179796_2 49 0.0525862068965517 1 0 0.00395269493993431 0.0040626901782349 0.00351014056747909 0.00275611840455086 0.000919337376681225 0.000875763149540897 0.00226732699946707 0.00268966919458867 0.00257108714449892 0.000876102338962829 0.000165768709590162 0.000360650957569373 0.000279507624235325 0.00151663054183219 0.00229449210289872 0.00398450529689971 0.000386432422878653 0.00551569284429345 0.00393009474826949 0.00383130372791856 0.000902863418018557 0.00109390901565699 0.000782957819877254 0.00192215279361354 0.00289682848920077 0.00262382219363767 0.00186381818290042 0.000347773287985453 0.000129735258768531 0.00017622077805748 NM_014947.4 FOXJ3 Homo sapiens forkhead box J3 (FOXJ3), transcript variant 1, mRNA. 0.0 1195 88.24 0.791379310344828 0 noncoding 0 0 0 0 0.406053057161889 0.147730277900113 -0.159395232260528 0.115776329092097 NNTTCTTAGTCTGCTCAAGTCACTGTTCTCTAGATACCAAAATAGCTGTTTTGAATCTTTAAATCGTGTGGGTAGCAATGTGCACTTTAAACAATTTGAGTATTGGAATGCAGTAGCTTATACTGAGTGATTCAGATAGAAACCACTGATGAAGATTTTACAAATTGTGTGAAGCTAATTTCCCATTCAGCAATCATTTACTGATGTGCAGTGATCCAGATTTTTGTGAGAATTTAAACTTAGCATGAATGGCCCTGGAGGCAGAGCCTCCACCCAGACCCATCCCACTCTAGTTAATGCACAGGACTGGGCAGGTCCGGCCAGCACAGCTACCTGGCGAGGTGCACCGCGTCCCTCTAGTGGCTGTCTCAGTGGGTAGTTGTTAATGCAAAGCAAGTTCTGTCTTGGGCTTAAATTGACTGAAGACTTGGGGAAAAGAATCAAATGCATATAATCAAATGGGGGCACTCTGTCCAGGAGAATAATCCGACTGGCATTTGTGGCAGTTTTTGAAATGTAAATGTATTCATGTGTGTTTTTGTAAATACGTGTCTCTCAGATGTCCTTTGAAGTGGGAGGGAATCAATCTGGGGATTATTTCAAATGGAATAGAGTATTTTGATATTGTTCATTCAGAGGGTGACGTGTACATATCTATATTGTATATATGTGATGAAATGCATTGGCTTTCTGTGCACACACAGTCTGCTCTCTGTACTGCTGTTGGCCAGTCAGTGTTTTAATGTTTCTACAGTTTTGCTATTGCACGATTTCATATTTTGCCTCTATGATGAACGGCACCCATTCTTTGTAACTGTTTAGTGCTGTAAAGAAATATTCCAAGTGTCATTAGGATTGTTGCTGCCAGAAGTGATATGCATGAATGGCACTTAAAATAAATATATTATGTTAACTCTATTTACAACACCAGTGGGTCTGTGTCATTTGCTGCAGTTGAGGGAACAAGACTGGAGCTAGTGCAGAAGCAGAAAGCCTGCAGTCTGTCCTTCCTTGGAGTCTCGGAGATCGTGTCCCACATATTGCTGTCTCAGAACAGTCATTGCTGCTGTTTACTGACCATCTCACTTGCTCTGTGAACTTGGGAAAATTATTTCCTTTCTCTCAGCCTCATTTTCCTCATTTACAGTTCCTATAAAGTG TCONS_00171116 . 3' 2814 TCONS_00171116 . 3' 3973 EMBV3_04164 AGACTGAGGAATGGAAGTCCAGAACTAGAGTGTGTTTCTTTGTGGTGGCCAAGTAGAAGC Gene GeneID:508163|UBLCP1:NM_001045994:16_cdna Constitutive 1 NULL GeneID:508163 7 GENE UBLCP1 MGC128319 ubiquitin-like domain containing CTD phosphatase 1 EMBV3_24061 ACCTGTGGGACACGGTAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACC Gene BVV0101_058034 + 0 NULL GK000003.2:103443374-103480290 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177279 TCONS_00010367 TCONS_00240474 TCONS_00031179 TCONS_00157937 TCONS_00019989 TCONS_00022064 TCONS_00160964 TCONS_00124121 TCONS_00135549 TCONS_00250932 TCONS_00162457 TCONS_00249014 TCONS_00166787 TCONS_00199804 TCONS_00206484 TCONS_00238440 TCONS_00156739 TCONS_00152752 TCONS_00148277 TCONS_00023334 TCONS_00251704 TCONS_00006469 TCONS_00007362 TCONS_00152648 TCONS_00063138 TCONS_00209596 TCONS_00207067 TCONS_00111547 TCONS_00254568 TCONS_00031897 TCONS_00065822 TCONS_00252355 TCONS_00088291 TCONS_00233373 TCONS_00160971 TCONS_00071184 TCONS_00023027 TCONS_00241273 TCONS_00123172 TCONS_00220656 TCONS_00253241 TCONS_00123617 TCONS_00251853 TCONS_00231277 TCONS_00165811 TCONS_00070956 TCONS_00206863 TCONS_00087858 TCONS_00210178 TCONS_00017462 TCONS_00198662 TCONS_00055859 TCONS_00056147 TCONS_00189807 TCONS_00240690 TCONS_00190575 TCONS_00186814 TCONS_00251004 TCONS_00249913 TCONS_00250196 TCONS_00197973 TCONS_00032586 64 XLOC_131641 XLOC_107053 XLOC_005918 XLOC_147138 XLOC_017428 XLOC_096391 XLOC_010667 XLOC_012735 XLOC_097857 XLOC_075673 XLOC_081772 XLOC_153875 XLOC_099338 XLOC_151957 XLOC_101623 XLOC_121456 XLOC_125006 XLOC_145107 XLOC_095199 XLOC_092517 XLOC_090159 XLOC_014001 XLOC_154645 XLOC_002032 XLOC_002923 XLOC_092413 XLOC_037865 XLOC_128107 XLOC_125586 XLOC_067447 XLOC_157500 XLOC_018142 XLOC_040541 XLOC_155296 XLOC_053078 XLOC_142855 XLOC_097864 XLOC_042956 XLOC_013697 XLOC_147937 XLOC_074726 XLOC_133973 XLOC_156182 XLOC_075169 XLOC_154794 XLOC_140766 XLOC_100651 XLOC_042733 XLOC_125383 XLOC_052647 XLOC_128688 XLOC_009039 XLOC_120316 XLOC_033667 XLOC_033950 XLOC_115844 XLOC_147354 XLOC_116610 XLOC_112865 XLOC_153947 XLOC_152856 XLOC_153139 XLOC_119632 XLOC_018826 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_03089 CCGTGCCGTCAACAGGACTGATGACCGCTGGTCCTGGCCTGGTTATCACGTCCCCCTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05337 ACTGCCACGCTTTCGAGTTCATGCAGCGCGCCCTGCAGGACCTGCGCAAGACGGCCTACA Gene GeneID:615222|LOC615222:XM_002688453:21_cdna Constitutive 0 NULL GeneID:615222 6 GENE LOC615222 NULL hypothetical protein LOC615222 EMBV3_16388 GCTGAAATGTTTTCTGACGGCAACTTCAACTGGGGCCGGGTTGTCGCCCTTTTCTACTTT Gene GeneID:280730|BAX:NM_173894:17_cdna Constitutive 0 NULL GeneID:280730 18 GENE BAX NULL BCL2-associated X protein EMBV3_28332 TGTGGGCTCCCCACCTGGCTGTGGCTTTCATCGTGATTTGTAACCAAGTTTGTCCCAATT Gene BVT0102_256404 + 1 EMBV3_26406 GK000009.2:78159575-78250166 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09531 ACTGAGGAAATACACAGTACAGGGTTGCTCTCGGCCCTGGACCTCGTTGAAGTCAATCCT Gene GeneID:518752|ARG2:NM_001017942:124_cdna Constitutive 0 NULL GeneID:518752 10 GENE ARG2 NULL arginase, type II EMBV3_26546 AGTTTATTGTAAAAAACAACATCCTACGGGAGTGGCGTGAGCCTCAATGGCCTGTGTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39431 TTTTGTTCAGTTTCTAAATTGTGTCTGACTCTTTGCAACCCCCTGGACTGCAGCATGCCA Gene BVV0101_062610 + 0 NULL GK000007.2:64900827-64945747 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01109 CACCTCCAGCCTCGTGCTCGTTTTCTGTGCTCGTTTTCTGTGCAAATCGCTTGAGCTTGT Gene BVV0102_030057 + 0 NULL GK000002.2:130858980-130900332 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106882 TCONS_00106885 TCONS_00106880 TCONS_00106884 TCONS_00106881 TCONS_00104035 TCONS_00106879 TCONS_00106886 TCONS_00106883 2 XLOC_062921 XLOC_062276 Coding TCONS_00106884 XLOC_062921 Coding Coding ZBTB40 2:130898253-130980240 j TSS78575 6249 1 TCONS_00106884_5 1237 0.0116818690990558 20 0.92402361378772 0.000561690938678554 0.00025833603332047 0.000926619200363684 2.41196383076364e-05 0.000176644697557967 0.00025646192210195 0.000187759689336301 9.03256384369066e-09 0.000582992128461157 8.67524339253632e-07 5.04354471923055e-07 1.66602325083499e-12 7.23021720371736e-05 3.1251182310406e-20 2.88244629616041e-05 0.000571873099628806 4.70384880089775e-44 4.23862408435632e-05 6.11217418858667e-11 8.04867956477017e-05 1.91807102156686e-23 3.0101727600087e-07 1.81135839714616e-08 3.80146506344009e-14 0.00127596334872854 0.000381643993147136 3.81202315906254e-08 2.06270501702776e-06 1.24096777491254e-11 9.28370672693257e-05 XM_005203209.1 ZBTB40 PREDICTED: Bos taurus zinc finger and BTB domain containing 40 (ZBTB40), transcript variant X1, mRNA. 0.0 1.127e+04 100.00 0.999839974395903 NM_014870.3 ZBTB40 Homo sapiens zinc finger and BTB domain containing 40 (ZBTB40), 0.0 4455 83.48 0.671627460393663 TCONS_00106884_5 sp|Q9NUA8|ZBT40_HUMAN ZBT40_HUMAN Zinc finger and BTB domain-containing protein 40; 0.0 2116 83.28 0.999191592562652 5 coding 0 0 1 0 -0.105322669269254 0.345449099748686 -0.0308834873469051 0.623291538697543 CAGCGCCGGCCTCAAGATGGCCGCCCTCTGGCGTCTCTGGCGCTGTTGAATGGAGAAAGCTTTATTGTTCCCTTCGGGTAGGAGTGTTCGTGTCCTCTATGGCGCTGTCAATAAAGAACGGCAGTTTGAATCGGTCCTGAACAGAGAGACTGTGGATTTTTGTGAATGTAGACCGTGGAGCCAGACTGCCTGAGTTTGGAGCCCAGATCTGCCACGTGCTAGTTGTGTGACCTTAGGGGTGTACAGAAATCCTCCTCATCTGTGACACTCTACATCTGTCTGTCTTGGATCGTGTGCTGACCCTCACCAAGCGTTTCTGGAAGAAGAGAGGAAGGGGAGTCCTCGGACAGAGCTGAAGTGATGGAGCTCCCCAACTACAGCCGGCAGCTGCTGCAGCAGCTCTACACGCTGTGCAAGGAGCAGCAGTTCTGTGACTGCACCATCTCCATCGGGACCATTTACTTCAGGGCCCACAAGCTGGTCCTGGCTGCTGCCAGCCTCCTGTTCAAAACCCTGCTGGACAACACAGACACCATCTCCATCGACGCATCCGTCGTGAGCCCCGAGGAGTTTGCCCTCTTGTTGGAAATGATGTACACAGGCAAACTGCCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGCCGACAGCCTACAGATGTTCGACGTGGCCGTTAGTTGTAAAAACCTTCTGGCCAGCCTCGTAAACTGCTCTGTCCAGGGTCAGGTGGTGAGGGACGTCTCCACACCATCAGAGCCGTCCAGGAAGGAGTCGGAGAAGCCTGAAACGGAAATCCTTTCCTCTGAGGGTGCTGGAGAGCATCACACTTCCCCGGAGGTCTCCACTCCTCCAGGGGGCCCCGTGAAAGTGGAGGTGAAGCACGGGGTCCATACGGCAGTGCAAGAGATGAGAGTGGATCCTCCTGCTGCCCAGGAGATTCAGGGGCACACAGACACCCCGGGGTCTCATTCAGCTGAAGTTTGTCCCTCCGCCCCTGTTGTACAAACCTTTAGGGAGGCCAAGGAAGCAAGCACAGAACAAGAGTATGAGGGGAAACATTACCAGCTGAATTTTCTTCTAGAAAATGAAAAAATCTTTTCAGACGCACTCTTGATTACCCAGGATGTTTTAAAAAGACTGGAAGAGTGTTCAGAAATTAAAGATGTGCAGAAGCAGACCATAATGGGATGCCTTGAGGGTGAAGGACAATCAGCATTTCAGAGAATCCTGGATAAAGTAAGAAGTGAGAGCCTGGGTGTTCAGACCGTTGTGTCCCTGTTGCGGCTGTACCAGGATTCCAATCCTGCAGTCAAGACAGCACTGTCAGACAGAAAGCTGGAGGCTGTAGAAGCAGTGCAGCCAAAAGCTCTTTCTCCCCCAGGGAGCACAGAGGAGGGAAAGACCTTGTCTGTTCTGTTACTGGAACACAAAGAGGACCTGATCCGGTGTGTAACACAGCTGAGACCCATTTTGGAGTTCCTGGAAACAGTGGAGGAGGAATTCCTGCCTGGCTCTGAGAAAAGGGTGATTCTGAATTGCTGTGAGGGCAGCACGCCCAAGGAGACGATAGAAAAGTTGTTGCACAGGATGTCTGAAGAGAAGACCCTGAGTGCTGAGAGTCTGGTAAAACTGCTGCAGGCTGTGAAGATGACGTTCCCAGACTTGGGCCTTCTGCTGGAGAATTTGCAGAAATTAGCCACTTTGCCGAGCACCACAGCCCAAGCAAACCCTGATGATTATGGGATTGAACTATTGAGACGGTATCATGAGAACCTCTCTGAGATTTTCACAGACAACCAGGTGTTACTAAGAATGATCCCACACGTGAAGAGTATAGTCCCTGGAGAAAAAGAGGTCATGGAGAAGCTCGTGAGACGTGCTGCTGGTTCTCGTGCTGTCCATGCTCTGATGTCAGCAGTTCTAGAGAAGCACACGGTGTCTGCAGCGGCCATCTGGCAACTGCTTCTGGTGGCTCAGGAGACGAAGCCCTGCCCATTGAGTCTGCTCATGGAGGAGATACGAAGGGAGCCCGGCGCTAACGCTTTCTTCCGGGCAGTGATGACCCCAGAAAGTGCTGCCTTCGAGACCATCCTGAGGTATCACCGGTCGATCCTAGAGGCCATCCAGCAAACGGCTCAGCTCAAGTGCCTGGCCTCAGAGGAGGAGCGGCTGGCGGAGACTGCGAAGGAGATTCTGAGCAGCTCCTCTGAGACAGCCAGCCCCGAAGCTTCCCTGGGAGCACTGCTGAGCAGAGCTGCGGAAAAATCCATCTCAGCCACTGAAATATGTCAGCTTCTGTGCAGCATCCACAGATCCTCCCCAGGCCTGCAGCCCGTCATGCGGGAGTTAGCGTGCGCTGGTTTCCTTACTCAGGAAAAGGGAGAGAAGGAAAGGTGGACAGTGAGTGGTAAATTTTACTCTGAAGGCAAGGACAAAGCAGGTGAAAAGCCAGCTGGAGAAGACTGCCAGCCTGGAAACCAGGACAGTCAAGGCGAGACGGCTGCCTTGCCCGAACAACAGGAGAAAGACGCGTCCACCTCCCCAGACTCTGCCAAGAAGAGCTTCGTCTGTAAGGCCTGCGACAAGAGCTTCCACTTCTACTGCCGCCTCAAGGTGCACACGAAGCGCTGCCGGGTGGCCAGGAGCAGGCAGGTGCAGTGTACGGAGTGTAACGAGACCAAGGACTCCAAGAAGGAGCTGGAGAAGCATCAGCTGGAGGCCCACGGCGCAGGTGGAGAGCCCAGCATCCCCAAGAAGAAGAAGAAGAGGCTCCCAGTGACGTGTGACCTCTGCGGACGGGAATTTGCTCATGCCTCAGGCATGCAGTATCACAAACTGACGGAGCATTTTGACGAGAAGCCATTCTCCTGTGAAGAGTGTGGGGCAAAGTTTGCGGCCAATTCCACCCTGAAGAACCACCTTCGCCTTCACACGGGGGACCGGCCGTTCATGTGCAAGCACTGCCTGATGACCTTCACCCAGGCCTCTGCCCTGGCCTACCACACCAAGAAGAAGCACTCAGAAGGGAAGATGTACGCCTGTCAGTACTGCGATGCTGTGTTTGCCCAGTCCATCGAGCTGTCCCGCCACGTGAGGACCCACACCGGCGACAAGCCGTATGTCTGCAGAGACTGTGGCAAGGGCTTCCGGCAGGCCAACGGCCTTTCCATCCACCTGCACACCTTTCACAACATCGAAGACCCATACGACTGCAAGAAGTGCAGGATGAGCTTCCCCACCCTGCAGGACCACCGCAAGCACATCCACGAGGTGCACTCCAAGGAGTACCACCCCTGCCCGACGTGCGGCAAGATCTTCAGCGCCCCGTCCATGCTGGAGCGACACATGGTGACCCACGTCGGGGGGAAGCCCTTCAGCTGCGGGATCTGCAACAAGGCCTACCAGCAACTGTCGGGCTTGTGGTACCACAATCGGACCCACCACCCGGATGTGTTTGCTGCTCAGAACCATCGATCTTCCAAGTTCTCGTCCCTCCAGTGCAGCTCCTGTGACAAAACCTTCTCCAACACGCTAGAACACAAGAAGCACATCAAAACGGAGCATGCAGACGTGAAGTTCCATGAGTGTGACCAGTGCAAGGAGCTCTTCCCCACGCCCGCGCTGCTGCAGGTCCACGTCAAGTGCCAGCATTCAGGGTCGCAGCCCTTCCGCTGCCTGTACTGTGCGGCCACCTTCCGCTTCCCGGGGGCCCTTCAGCACCACGTCACCACCGAGCACTTCAAGCAGTCGGAGAGCACCTTCCCCTGTGAGCTCTGCGGGGAGCTCTTCACCTCCCAGGCCCAGCTGGACTGTCACCTGGAGTCTGAACACCCGAAGGTGCTGGGCGCGGAAACCCAGTCGCAGATGGTGCAGGTGATCCAGACCCCAGAGCCAGTGGCCCCGATGGAGCAGGTGGTCACGCTGGAGGAGACCCAGCTTGCCGGCTCACAGGTGTTCGTGACGTTGCCGGATTCACAGACAGCCCAGACCAGCTCTGAGCTCGTGGCCGTGACCGTGGAGGACTTGCTGGACGGGACCGTGACCCTGATCTGTGGGGAGGCCAAATGAGTGGCTGCTCATGGCTAGGGGAGGGGGGTCCTGCGTGTGCAGTGGAGGAAAAGCTGCACACTTGCCTGTTGCCCCTCCTCCCTGGCACAGTACTGAGCATCTTAGCTTCACACCAACCTAAGCGGTCTCCCTTGGGAAGGGGCAGAAGCATGGCTGTTCTCATAAAACCAGCTTCTGAGTCATCGGCAGCCATCACAACCGCCCCCTGTGGCTGGCAGGCCTGTTCCCCACAGGCCTCCTGCGGCGGCCTCTGTGACCCTGTCCACCCACAAGCGGAGTGTGGCTTCTGAAACAGAGGCTGAAGGAGCAGTGGGGCAAGGGCCGGTGATCAGAGGGACAGGTGTGATGCGCCGGCAGCCCTCAGTATGCGGAGGGGCAGTTCCAGGCGGGACTGTGGCCCGCGGAGTGGGCCAGCACACGCTGCAGGGCCTTCTGGCCATTGAAAAGCAAGAGAACCGCACCGTCAGGCCGTGCAGGATCCCTTTCCTCGCGTCTGGCATCCTCCCAGCCCCTGCACGGCAGCGGTAGGCCTGGTAGCAGCGTGCCCATCAGGAAGCCCTCGTTTCCAGGCCGAGGCCCACCCTGTCGACTCCATCGGCCCTTCCCATAGCCGTGCGGGTGTCCAGTGTGAGGCCACGTGGCTGCAAACCACCCCTGCCCTCCCGGAAACTCCTCATGGTGTTCTGCACTGGAGGCTGGTTCCCACAGTGTTTCCGTGGTGCCCTTATCCCCTGTCCTTAATCAAAGCCTCACGCTTCCACCCAGCCTGGAGGCCTCGGCCCCTCCCCTGGTGCCCAAGGCCCCCGACTCCTCCTGCTGCCCCGGGCTCCGCTGCCCTGTGTGTAGCCCCACTGGCAGCGCCCTCCTCGGCCGCCACGGGGAGTGCTGGCCAGCGGGCCTCTGGAGTCTGAATTTCACAGAGCTTTTTTTTCTCTTCAGTTCCCAAAATATAATCTGATAATTAATGGTTTATGGAATCCATTATGAAGTGCAATTAGATGGATATAGGTTCCTGCCGTTCAGAGGGAATAGCTAGCATTTATCTTCCTTTCCTTGATGCCAGAAGGTTGATGTCTGCGAGGGCAGCGTGTCCACGCCCAGCACGGCTCCCTGCCAGCTTGTGCGGCTGACCCCCTGTCTGATCCCTCACCCTCACGATACAGGCCGCCCAGAGACAAGGCCACCCCTTCTCTCTAAGCGCATTTCACATCACCAGGCACCAGCAGGGGAGGGGGTCGATTCGGGTCGTGGTCAGTCCGTTTATCGCCATCACACTTTGCCGGAAGGGCCACGGTATGGCCCTTGCCACCGGCCCACTCTCTGCAGGCAGCTCAGCAGCTCCCTCCCACCTCCAGCCTCGTGCTCGTTTTCTGTGCTCGTTTTCTGTGCAAATCGCTTGAGCTTGTCAATTCAGGGATCTTCCCGTTAGGAAGTAAATGAAGTTTTCAAAGGCCAATGACTGACCAGAAGATGGTGCTCAAACCTTTAAGACTTGGCCTCCCTGTGAGGCCCTCACTGCTTCTGCCAGGGCTGTCTCTGTCTTCTTAAGGTTGCTCAGCCCCGTGAGCTGTCAGACCAGGACTGCTCTTGATCAGCAAGTGACGAGATGACACCGAACCTCCGCTTGGCACCAGATAAAACCCCACTGAGATTACGGAGCTGCCCAACCCGCAGGGCGTGGAGGCCGAGCCTAGCAGATAAGAAGGCACGGGTACTTGGGAATCGCAGCATCATCAAAACTTCTTCCAGCCAAAAAAAGAAAAAATTTAAAAATTAATGACTGCGGACCTGTAGGGGAAAGTGATTTTTTTCTTCTTAAAAAAAGTTCTCTGAATAAAGAAAGCTGTAAACTTTCAACCCAACTTTCCGATCCTTTTCGAGTACCGAGACAGCCTTTTCTCAGGTTTCAGACGGAGACCCGGGTGGAGGCAGGACACTGCTTCGCCTCAGAATCACTGGACCTGCAGCTCGCTGTGCCGAGAGCAGGCAGGGAAGCAGGCCTTGCTGCCAGCTGCACTCTGAGCCCCGGCACGGCCGGCCATTGGGAGCACCAGGCCTATGCTGGTTCTGGTCAGCGCGAGGGGAAGGTCCAGCCGGAGTCTCGTTTCTGCTCCGAGTGGACCTCTGCAAGATGCTGCATCAACAGTGATTTTTACATCATTGCTCCCTGGAGAC EMBV3_18990 ACTGGGTCTCACAGCGACAGAAGTGATTGGAGAGAGGTTTTCAGTCCTGAGAGTGAATTA Gene BVV0102_206156 + 0 NULL GK000030.2:143891366-143901052 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248660 TCONS_00248657 TCONS_00248659 TCONS_00248656 1 XLOC_151661 NonCoding TCONS_00248660 XLOC_151661 NonCoding NonCoding - X:143895330-143897920 - TSS185915 2590 2 TCONS_00248660_6 104 1 0 0.000342243879946312 2.47307428805688e-20 5.28739680966445e-19 0.00023426282400773 3.76304732673599e-19 8.9048748495548e-05 0.000467670462972418 7.39166763743685e-05 0.000263403683042337 1.26327450648246e-19 1.02798930196343e-17 9.44516326134343e-15 0.000179099183544847 5.88609990632415e-05 1.65620299963512e-17 0.0117033035671056 0.00282687652021867 0.00183535519037115 9.00314276604367e-05 1.6687898678249e-16 8.98594302995265e-06 0.0024640066629091 0.00123223893402926 0.0052591794329777 0.000546385209820441 3.93660188350555e-05 0.000138079667963977 0.000417734445723722 1.13919664175127e-18 0.000226797713712105 XM_003584364.2 LOC100849399 PREDICTED: Bos taurus F-box-like/WD repeat-containing protein TBL1X-like (LOC100849399), mRNA. 0.0 4598 99.35 0.999227799227799 XM_005274586.1 TBL1X PREDICTED: Homo sapiens transducin (beta)-like 1X-linked (TBL1X), 2e-60 239 83.54 0.0926640926640927 0 noncoding NCCAGTCTCAAGGGCACTTTCGGCGCATAATAAGTGCTTTATGTAAGAAGGCAGGGCAAGGGGGACTTTTTACAAGGAGGGGGAAGAAGAAAAAAAAAAAGTGACTTATAAGAGAAAGAGCCCGGAGTATTTTTGGAGAAGAGAAAAAAGATATTTTTTATGTTAAAACAATTTTAAAATCGTAAAATGGCCATTCAGACACGAGAGCTTTGTGTGATTCCTATTTAACAACAAAAAAAGAAGCCTTTAGGAAGAGACAGGTAGAGGGGTCCCTTCACTTTGAACTTGGTGGAAAGCAGTGAGGGGACTCCGGGTGGGCAGCTCTGGGGTCGGCTTTGGGGCTGGTCTGTGCGGCCGGAGAGGAAGACCCCAGCCCCTTTTCTGCTCCAAGAAGACCTGGACGTTTCTTTCTTCCCAGTGCATTGGACCAGAACAGCGGACAAGGGGGTGCCCTCGAACCCAAGAAGCGTTCCCAGATCCAGCATCGCTGAAGGGGGGCCGTCGGAACCATCCCGCTCCACGACACCAATGCCGCCTTGTTTGAGACTCGTGGGCGTGGGTGGGGGGGACCCCCTCCAAACCAGGAGCAGCTCGGCCAAGTCCCTCCAGGGCTGACCAACTGGAGGGGCCTCCGGGACCTCACTGGGTCTCACAGCGACAGAAGTGATTGGAGAGAGGTTTTCAGTCCTGAGGGTGAATTAACAGAGGTAGGGTGTCTCAGTTCACAGGCCATCTTCACAGTTTGCTTCCTCTGGCAGCAGGTCAGGAGAAATTGCCCTTTTTTTTTAAACAATGAATCTTTTTACTGTTTTTAAAAAAAAAAAAAAATTAAAACATGGCTTTGTGTGTCCCTAGGGGAGTTTTCCTTTCCCTTGGATCAGGTAACCTTTGTACTTCTACTGCTGTCCTGACCCCATGCTGACCCAGCTTGTAAATTAGCAGCAGGGCCTCTGGGCTTATCCGTCTTCCCCCCGGGATGGGGCTGGCGGTGGGTAGGTTGGCAGCCCTTTTGTGTTCCAGCAACCAGCCTGGATGGTTTTGGAGGGTGGTGGTATCTGTCCATGGACCCCGAAGCCAACGGTAAGGCATGGCTAGGCCTTTGTGCAGAAGTTGGATTGTCCTGGGAGCACCCCCAAAGCCAGAGTGCATTCCTCTCTCTCAGCTCACTATCTATCTCCATGGATCTGAGAGTTTTTCAAACCCCCTTGACTGCAGAAGACCAACAGGCACTCTTCACAGGTCAGGCGTGTTCTCAGGCTCTGCTGTATCTAAACACTCAAACTTTCAGAAGGTCAGTGTTTGATTGGCGTCTCCACTCCCACCTTTGAAGATAGCAGACGCCCTCAGGCGTCCACGGATAATCACTGACCCCCCTCACCCCCCCCAAAATGATTAACTTTGAGATGCAGTTTGCAGAGGTCTAGTTGAACACCATCTGGACCCCTCCCCGAATGAAAACGTGTCACTGTCCACACAGCATCAGCTGCCCGGGGTCCAGACAAGGTTTGCATTTGATGAGCCAAATGCTGCTGGAGGGTGGTGAAGGTGGGATTTGATATAAAAGGCCCACGAGAGGATCGTCACGGGGAGGTTGGTACGCAGGGTCTCCCAAGTATTGACGGGGGCCTCCTGGTAAACCTGTACCAGGCTGGAAGTTGCCGGGTTGGAGCCAGGGGCTGTAAAGCCAAGGACACGGACTGGATACCGGGCGTGGTGATGAACTGAAGCTGCTGAGGAAGGCAGAACTGCCCATGAACCATCAGGAAGAGGCCCCGGGATGGGGACCACGAGGAGGAGGCAGCCGGCGCCTCTGAAATCATGCCTGCCCTGAGTCACACCCGCTGCACCCTCTGCCAGCGCTCAGTGGGCGCATCGCTTCGTCAGTGCGAGCGGCTTCTAGACTTCGTGTAGAACGCTTCGTAGTCCTCAGTGTGCAGATGGGACCTTGGTGCTGAAAGCAGAGAGTAACGCACAGATCCATCCCCGGAATTGTCCACCTTGCCGGGGAGCTCGTTCTGCTCGCTCGCGCGCGCGCACGCACACACACACACGCACGCCCGGGGAAGCGCGTCCGAGCCCACTCCACGGCTACAGAACCGCGATGTTCACTTTGTCTTTCTGAAGAGAGATCTCGGAGCCGAGTGAAGTGCACTTTGTCGGGAGTAAGGGTCTACTTTTTGTTTTGTTTTGTTTTAACCTTTCAGCCTTTTTTTTTTTTTTCTGATCGTGTTTCCCATCCAATGCAGAGTGTTTTCCTCCCGCCGCTCCCTGAGGTTTGTGAATGTCTGGCTTCTGCGGTTTTTATTGTCTGTGTCAGACGTACAGCCAGATGTCCTGTCCGCATCTTCCAGCTTCTGTTCCATCCACACGGCACCCCTCACCCCGTTCCGTTCTCTCCACCAATGCCCCACTGCAACCCCCACCCTCACACGCTCCCGGAAAGAGAATCACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATCACCATGTGTGTGTGTGAGAGAGATGGCTCATTTGTTCCAAGAGAGAATCAACAGACCATATTAGGTTATCTTAAATAAATTGCTCTATTTTGATAGAGA TCONS_00248661 TCONS_00248662 s 3' 3133 TCONS_00248661 TCONS_00248662 s 3' 3133 EMBV3_26970 AGGGGGATTAACTCATGGTAGTGTCATACTTAAGTAGTAGCAAGGAAATACAAACATTGA Gene GeneID:505144|CHORDC1:NM_001045912:26_cdna Constitutive 3 NULL GeneID:505144 29 GENE CHORDC1 MGC137302 cysteine and histidine-rich domain (CHORD)-containing 1 EMBV3_26253 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14239 CCCTTCCTCCCGCTGGAATATAAACACCTGAAGATGTGCATCAGAGTCGAAATGCAGTCG Gene GeneID:533699|TOR1A:NM_001099058:157_cdna Constitutive 0 NULL GeneID:533699 11 GENE TOR1A MGC159530 torsin family 1, member A (torsin A) EMBV3_38529 CTCCACTGAGCAGGACAAATTCTCAGGGCACTTGTGGAAGGGACATATCCTGTGAACAGA Gene BVV0102_093140 + 1 EMBV3_05514 GK000028.2:26735794-26764742 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05156 GTGCACAAGAGAATACACAGTGGGGAGAAACGCTATGAATGTGATGACTGTGGAAAAGCC Gene GeneID:100125388|LOC100125388:NM_001105028:82_cdna Constitutive 0 NULL GeneID:100125388 17 GENE LOC100125388 MGC152528 hypothetical protein 100125388 EMBV3_09815 CAGAGATCCTAGGCATTGAGCCTGATCGGGAGAAGGGATTTCACTTGGATGTGGAAGATT Gene GeneID:509943|TSN:NM_001075422:8_cdna UTR3_Alt 2 NULL GeneID:509943 2 GENE TSN MGC143058 translin EMBV3_13728 CGGTGGGTGCACAGACACAAACACATACACACTACTGCATCGAGAATCCTGGAACTGTTG Gene BVT0102_127129 + 0 NULL GK000005.2:36859267-36877857 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191608 TCONS_00191609 TCONS_00191606 1 XLOC_116971 Coding TCONS_00191606 XLOC_116971 Coding Coding TWF1 5:36847796-36861063 = TSS143555 3109 1 TCONS_00191606_1 384 9 0.766319915573647 0.00750226734957068 0.00318266119825893 0.00320843552824494 0.00276430505101114 0.00346235731184235 0.00180124343161856 0.00472861275559386 0.00276566150211731 0.00833060189333824 0.000197796023709259 3.07566181615295e-05 0.000816858735663146 0.000592560983498189 0.00115902161870661 0.00185410019819393 0.00420869187465546 0.00288287307599318 0.00975522336170438 0.00207971004143813 0.00203795650145834 0.000659919566475008 0.0010843107729952 0.00160052994586281 0.00306642895697125 0.00286775024648844 0.00283090267282917 0.00108530682015444 1.84577423429144e-08 0.000176150731511141 0.000371910560972663 XM_005206417.1 TWF1 PREDICTED: Bos taurus twinfilin, actin-binding protein, homolog 1 (Drosophila) (TWF1), transcript variant X1, mRNA. 0.0 5472 99.32 0.983274364747507 NM_002822.4 TWF1 Homo sapiens twinfilin actin-binding protein 1 (TWF1), transcript 0.0 3259 82.75 0.996783531682213 TCONS_00191606_1 sp|Q56JV6|TWF1_BOVIN TWF1_BOVIN Twinfilin-1; 0.0 729 100.00 0.908854166666667 1 coding 0 0 0 0 0.402535439674295 0.0713475112258335 -0.100277038942205 0.0846102340501966 AGGCCGATGACGCGCCGGGGCCGGCGGAGGAGCGGCCACTTCCTGGAGCCGCCGGCCGGGGCCGCTCGCTGCACTCAGCGCTGGAGCCGGGAGCCCGCGGCCGCCGCCATGTCCCACCAGACCGGCATCCAAGCAAGTGAAGACGTTAAAGATATCTTTGCCAGAGCAAGAAATGGAAAATACAGACTTCTGAAGATATCTATTGAAAATGAGAAACTTGTGATTGGGTCGTGTAGGAAGCCTTCAGATTCCTGGGATCAGGATTATGATTCCTTTGTTTTACCCCTGTTGGAGGACAAACAACCGTGCTATGTATTATTCAGGTTAGATTCTCAGAATGCCCAGGGATATGAATGGATATTCATTGCGTGGTCTCCTGATCATTCTCATGTTCGTCAGAAAATGTTGTATGCAGCAACAAGAGCAACTCTGAAAAAGGAGTTTGGAGGTGGCCACATTAAAGACGAAATGTTTGGAACAGTAAAGGAAGATGTATCATTACATGGGTATAAAAAATATTTGCTGTCACAGTCTTCTCCTGCCCCACTGACTGCAGCTGAAGAAGAATTAAGACAGATTAAAATTAATGAGGTACAGACTGACGTGAGTGTGGACGCTAAGCATCAAACACTACAAGGAGTAGCATTTCCTATTTCTCAAGAAGCTTTTCAAGCTTTGGAAAAATTGAATAACAGACAGCTGAACTATGTACAATTGGAAATAGATATAAAAAATGAAATCATAATTTTGGCCAACACAATAAATACAGAACTAAAAGATTTGCCAAAGAGGATTCCCAAAGATGCAGCACGTTATCATTTCTTTCTGTATAAACATTCTCATGAAGGAGACTATTTGGAGTCTATAGTTTTTATTTATTCAATGCCTGGATACACATGCAGTATAAGAGAACGAATGCTGTATTCTAGCTGCAAGAGCCCTCTGCTAGAGATTGTAGAAAGACAACTACAAATGGACATCATTAGAAAGATCGAGATAGACAATGGGGATGAGTTGACTGCAGACTTCCTTTATGAAGAAGTACATCCCAAGCAGCATGCACATAAACAAAGTTTTGCAAAACCAAAAGGCCCTTCAGGAAAAAGAGGAATTCGAAGAATAATTAGGGGTCCAGCTGAAACTGAAGCTACTACTGAATAAAGTTATTATAATACTAGTTTTTTAAGAGTCCAGCTTTTAGTACAGGAGAACTGAAATCATTCCATGTTGATACAGAGTAGAGGGGAAAATTGTACTTTTTGAAAATTAGCACTTTTCACTTCTGTATGTTTATAAAATTAATGTTAAAGAAGACTTATGATTTCTGAGTTAAATCTAGAAAAGAGTTCAATATAATGATGTTTAATTTCATCACAGTTTTCATAGAGTGATTATTCCACAGTTTTCATATAATTCTTAAAATTTTATACAGTTGGGCCAATTCCAGAAAAGGCTAATGTCCAAAAGTAAGATACAAGTCTTATTACTGTTTGATGATACATCTTTTTTTTTTTTTTTTTTTTAAGGGAGAGAGACCTTAAAATATTCATTCCACTTAATGAATACGTTAAGGACCAGGTTAGGTTATTTTCTAAGCTGAAAACTTCATGTGCCTAGGAAAAAGTGGAAAGTTGCTTGCTCTGAAGAGCAGTGCTCACTCAGACCGTGGGATAATATCTGCAATGTTTAGACGGTGCTTTATTGCAGCAGTCTTTTCTATTTGACTTTCTGGTTTTTTAAATGGCTTTAAAGTTGCAGAAGATCAGCTCACTCTGAAGCCTTAAGGGTACTAGATATTTTCTATACTATAGGACTTCTGATGATGTTGAAAGACATGTTTAAATACCTTTATTAAATTCTCATTCTAGTGCTATAAAATTTTTTCCATTTCAAAAGTAATTCATTTCATTATATGTAGTGTGAGGCAAAATATTTATGTTTAGTTGAATATCAAGTTAATATTCGAAAGAAAACAAAACCGATGTCAACAATATTGAAAACATTTTAAACATCACGATTGGTTTGTCTAAAACCATACACTAATAGGCAAATTGTGTTCTTTATCACTTTTGAATGAATGTCCAGATTTAATAAAATTATTTTAAAGTCCTGGTACTCATCAGCCTAACACAGATTAAGAATATGTTTCAGTTTATATCATATTTCAAAACACATTTAACTGTTTCTTAAAGCTTTACATTTTTAGTTACAACCTCCAGAGATTTTGAGCCTCATTTTCTTCAATACTTGAAATAGAGGGAGCTAGAACACTTCATCATGTGTAATCTGATAAACCTGCTGCAAGAGCCATAATTTTGAGGACTTTTCTAAGTGAATTGTGGGGATCCAGGATTTAGAATTTCTTGATCTAAACTTGCATAAAGGAAATACCAGACGTGCACATTTCATAGTATGAAATAAGAAAGTCATTTTTACACTTTATTATCTAAGGTAATATATGCACCTTTCAGAAATCCAATGTGTGTTCAACTAAAGCATGTTAGAATAATTATGAGTTGACAGATTTTGTTTTTTTCCTAGAATTAAGAGTATTTGTGTGGGGTTTTGTTTGTTTACAAATAATCATATTTGCATATTTAAACATGCAAAATAAGTACGGTAATGTTGCACTTTTTTATGAAAGAGTTAAGTTTTTCGGTGGGTGCACAGACACAAACACATACACACTACTGCATCGAGAATCCTGGAACTGTTGACTAGAGACCAAGCTGCTGACGCTCTTCTTTTCAGTCGGGAAGAATGTTAACCTGTCATATGGTATAAAATAATTTAGTAGTGAATGTTTTTCTATACCATCCATGTGCAATTATACTCTTAAACTCTATTACACTACATGCAAGTGAACATTCCAGAATATAGATGTGATTATATAATCTTTAATTATTAAACCAATGATTGTTGAAAATCAGTGATGCATTTGTTATAGAGTATAACTCATTGTTTATGTTTTGGGTGATGTCATAACAATAGAAAGTGAATAAAGTATTCCCAGTAAATTTATATAGCAGTGAAGAATTACATGCCTTCTGTGGACATTTTATAAGTGCGTTTTATATTGCAATAAAATTTTTCTCTTTAAATTGCATCC EMBV3_35706 CTAAGCAGGCTTAATTGTTATCTTCACCTAGTCCAAGTGGGTTGAGCAGTCACCACACAC Gene GeneID:541013|MAGOHB:NM_001076252:8_cdna Constitutive 0 NULL GeneID:541013 5 GENE MAGOHB NULL mago-nashi homolog B (Drosophila) EMBV3_12416 GTCTCTTAGCTCCTGGGTATCGTCTTCATCCAGTTTTCCTGCATTTCAGCACCCACAGTC Gene GeneID:539419|TBX20:XM_002686818:66_cdna Constitutive 0 NULL GeneID:539419 4 GENE TBX20 NULL T-box 20 EMBV3_10954 AAGGCAAAACAAGTGAAACTTGGCATGGAGGCAAGAAGGGGTTAAAAGTGGAATGTATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30731 TCCTTCCATGCTGCAAAGGAGCATCTTCCCTTCCTCCAGTTTTCTAAAGATTTCTTGACC Gene GeneID:506766|MAP7:NM_001101874:14_cdna Constitutive 3 NULL GeneID:506766 9 GENE MAP7 MGC151537 microtubule-associated protein 7 EMBV3_24035 AAAAAAGATCTCTGGGGCTTCTGGGGGTGAGAGTCGAGCAGGACAACATCAGCCTGGATA Gene GeneID:539360|CAPN6:XM_002699929:71_cdna Constitutive 0 NULL GeneID:539360 X GENE CAPN6 NULL calpain 6 EMBV3_15640 TCTTCCTCTCGAATTTCTTCAAACCCCCATAGGCTGGGTCAGGTAGCCCAGAAGTAGGGT Gene BVT0102_224361 + 0 NULL GK000024.2:40508688-40563770 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40527 TGCCTAGGGAGATCACTGGACAAGAAATCGGGTTATCGGACGTCTAGCCTCAACCCTGTT Gene BVV0102_336565 + 0 NULL GK000029.2:17628587-17801607 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24366 CCGAGATATGTTGTGGGTTGTCGTCGACAGATATTTGCCAAGAGAAGTGGATCCATTGGT Variant GeneID:518637|PSMC6:NM_001046240:167_cdna 295^362 1 EMBV3_08328 GeneID:518637 10 GENE PSMC6 MGC137217 proteasome (prosome, macropain) 26S subunit, ATPase, 6 EMBV3_20475 TGACACGATTCTTGAACAGGAAGGAGGACCAATCAAAGTTGGACATGCGAATCCTGCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04911 CCAGTGAACCTGTACTTGGACATCAGGTAGTGAGTCTATTTGTGGTCACTAGCACTGTCT Gene GeneID:782746|PURA:XM_002689218:57_cdna UTR3_Alt 1 NULL GeneID:782746 7 GENE PURA NULL purine-rich element binding protein A EMBV3_23482 GCTACAGCCTAGAACAGGCAGCAGAAGAAGCCTTTGTAAATGACATTGAGGAGTCGTCCC Gene GeneID:281078|CLTA:NM_174022:8_cdna Constitutive 7 NULL GeneID:281078 8 GENE CLTA CLTA2 MGC140767 clathrin, light chain (Lca) EMBV3_18808 GTGTGCTGCAGTCCTTGGGGTTACAGAGAGTCACTGAGGGTGGTCTTTCTGAATCATCAA Gene BVT0102_320020 - 1 EMBV3_19157 GK000019.2:7614075-7830733 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094970 TCONS_00094972 TCONS_00094971 1 XLOC_057614 NonCoding TCONS_00094971 XLOC_057614 NonCoding NonCoding - 19:7802327-7811831 - TSS70945 2631 2 TCONS_00094971_1 69 0.426453819840365 3 0.723455750815532 8.93665463457435e-06 0.000103051587216432 7.68332035095276e-08 7.09311981899593e-09 3.47592683280395e-09 2.43075377161709e-05 1.43872286538583e-09 8.81955613664771e-06 0.000128082494703182 0 0 0 0 0.000116796654469011 0 0 0 0 0.00052072341445752 0.000142500383153398 5.46650870676894e-08 0 0 0 0.000128495428651059 2.81157647748804e-05 5.69814979120537e-05 0 0 0 NM_001102539.1 ZFP30 Bos taurus zinc finger protein 30 homolog (mouse) (ZFP30), mRNA. 2e-97 361 92.40 0.0931204865070315 0 noncoding 1 0 1 1 -1.12173519270986 0.0249854033387361 0.00335304852254957 0.943244660749174 GTGTCCGACTTTGTGCGACCCCATAAATGGCAGCCCGCCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCGAGTAACACTGGGGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAATTCGCTCGTGTCCAGCTCTTCAAGACCCCATGGACTGCAGCCTACCAGGCTACTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGATGGAAGGACTGGAGAGAAGCAAAGGTGCCTGGTGGGCGATGGTCCATATGGTCACGAAGTCAGACAACAGCTGAAGTGACAGCACGCGTGCATTCCTTTGGAAGAAATAGCTGTGACATAGGCCCTTTCAACCACATGGAGTCTTTCCCGCAACCCAGCCCTCTCTGGACACCTTGAGCTCACCCTGCTGCCGCATGCCGCTTCCTGCACTGTCACCCTCCCTTCCTGTGAGTCAGAGCTCTTCATCTTCACCAGGTTCTGGGGGGCCGGCTGCCCCCGGGACGTGTCAGGGTAGAGAGTGAGGACTGGACCATCCCTGCAGGGGGCCGTGCGGATCGCTGGGCTTTGGGGAAGTGGAGCGTTTCCGGGGGCAAACCAGGAAGGCAGTGGAAGGCTGTAGCGTGTCAGGCCTACAGCGTCACCACATCCATAACATTGCCGCTGGGATTATGTTTCCTACGGATAACTAGTAAAGGGGCTTAGGGCTTTGTGCTCAGTGGCTCAAGGCCGTATTGGGATGACACTTAATGAACAAGCATGGGGACAGGATCAAGAGGAAGAAAGAAGAATCTGCATAAATTGTGAGGAAGGAGCCTGGATTCATGGAGGTTGTGAAACTGGGGATTTGTACTATGGGTAATGCTTGTCTATCTTTCCACTGAACTGTAAGTTCCTTGGGGGTGTGAGGTGTGGATTATTCATCTCCAGATGCCCAGGGCCCAACTTAATACCTCGTGTATAGCACACAGGGCTCAGTGAATACTTATTGGGCGTATGGGTGGATGGATGGAGGAATGAATGGAGGGATGAAAGGAAGGAAGGATGGATAAGTGGATGGATGGATGGAAGGGTGGATAAATGGATGGATGCATGGAAGGATGGATAAATGGATGGATGCATGGAAGGATGGATGCATGGAAGGATGGATAAATGGATAGATGGATAAATGGATGGATGCATGGAAGGATGGATAAATGGAAGGATGGATAAATGGATGGATGGATAAATGGATAGATGCATGGAAGGATGGATAAATGGATGGATGGATGGTTAGTTTTTCTAAGGAGGCAGCCTGCAGTCATCTGCCTTAGGTGCCCTTTCTTATCCTGCCCTGCTCCCTTCCTCAGCCGGCTGCCTTGGACTCATCCTTCATAACACAGCATCTGGGGCTGAGGGAGCAGTATAAGCAAAGGCCTGGAAGTAAGAGGGGGCAAGGCCAGTTGGGAAACCGTAGGAAGGTGTGTGTGCTTGGAAAGCACATTTCAAAGGAGAGAGCAGGGGTGGGTGACGCAACTGGAGACTTAATCAGGGGTAAGATTCTCGAGAGTCCCTTGGATTGCAAGGAGATCAAACCAGTTAACCCTAAAGGAAATCAACCTTGAATAGTCATTGGAAGGACTGAAGCTGAAGTTCCAATACTTTGGCCACCTGATGCCAAGAGCCAACTCATTGGAAAATACCCTGATGCTAGGAAAGATTGAGGGCAGGAGGAGAGATGGTTGGATAGCATCACTGACTCAATGTACATGAGTTTGAACAAACTCTGGGAGGCTGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCCTTGGGGTTACAGAGAGTCACTGAGGGTGGTCTTTCTGAATCATCAATTCTGCTTGCAGCACAGCAGGTAAAAGTCACTTTGTACTTCGTGTATTTCTGAGCAACCGAACGACAACAGACTATAAAAGGACTCCATCTCTGGCCCTTTGCTTGAGAGCAGTGGGACCTGTTGAAGTGTTCTGTGCAACATCATGGACAATCGCATTCCACTTTTTTTGTCTACCCCACTTTTCAAACAATGCTTAGAACTTCTGTGCCAGGAACACCCTGGAGCAGAGCTGTGACCCAGGCTGTCAGCTGTTTCACCGGGAAGCACACCAGGCCTGGACTCAGATGGCCTGAATTTCTTTTGAGGCTCACTCTTGCGGTTGCCAGCTGAGTGACACAGTCCCTTTCCCTTGTGCCTCAGTCTCCTCACCTGTGAAATGAATAAAATAGAATGTGCCCAGGGCTGGCTTCATGGACGTGTAGCTTGTGCAGTAACACAGGATTCCATCCTTGCAAGGATCCTGGCCTTGGCTTAATGCTGTGCTGCCACCATATTGACATTCTTATTAATTTTTAAACAAAGAGGCCCATATTTTCATTTTGCACTGGGGCTCACAAATTATGCAGTTGGTCCTGAATCTACCTCACAGGGATGGTGTGAGAATAAAATAAGATCCAGTATGTGAAAAGTCTTTCCTGGGTTTTCTGGCTCTGTGGCTCAGCTTGCGGGATTTTAGTTCCCCAACCAGGGAAGTCCTATGAAAGGTCTTAAAAGGCAATAAAGCCCTCAGCAAATCTTAGGCCTTACTGAT TCONS_00094977 s 3' 26159 TCONS_00094977 s 3' 18903 EMBV3_10111 CCTGACAGCGACAGATGGACTCTTTGACAACATGCCTGACTATATGATCCTTCAGGAGCT Gene GeneID:525355|PPTC7:XM_002694495:367_cdna Constitutive 0 NULL GeneID:525355 17 GENE PPTC7 NULL PTC7 protein phosphatase homolog (S. cerevisiae) EMBV3_21568 GCCTTTGGCCGGCACTCAACCCTTATGAGCCATCAACAGATTCACAGTAAACAGAATGCC Gene GeneID:789074|ZNF789:NM_001105470:350_cdna Constitutive 0 NULL GeneID:789074 25 GENE ZNF789 MGC179483 zinc finger protein 789 EMBV3_36455 TCAGTGAGGCTCCTTTCTCTGACCTAGCGACTTACAGGTACCGTCCTTCACCCACCTCTG Gene BVT0102_142827 + 0 NULL GK000018.2:1545902-1548805 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082050 TCONS_00082053 TCONS_00082055 TCONS_00082054 TCONS_00082049 TCONS_00082056 TCONS_00082052 TCONS_00082051 1 XLOC_050899 Coding TCONS_00082049 XLOC_050899 Coding Coding MTSS1L 18:1530967-1547778 = TSS61971 4121 1 TCONS_00082049_1 747 15 0.755740630577037 0.00180772365131843 0.000365636467588124 0.000652911061012331 0.00129932975736707 0.00130267245795841 0.000380805154591994 0.000490423033901416 0.000938760852847929 7.69229554636655e-05 0.000123338986233429 4.1813680239308e-12 6.0956424901065e-05 1.25314303148773e-05 0.00133150537547349 0.000431363207463979 0.000643672912187871 0.00257836845768399 0.0030868768502692 0.000889634195973261 0.0032293104232837 9.309134912388e-05 0.000283024575999206 2.62919078107239e-09 0.000262226220691074 0.00178251913851936 0.00202228202567548 0.000302353644862242 0.00021051413661712 3.7253372403732e-06 2.0927185446942e-135 XM_600126.7 MTSS1L PREDICTED: Bos taurus metastasis suppressor 1-like (MTSS1L), mRNA. 0.0 5941 100.00 0.799077893715118 NM_138383.2 MTSS1L Homo sapiens metastasis suppressor 1-like (MTSS1L), mRNA. 0.0 3079 87.41 0.592574617811211 TCONS_00082049_1 sp|Q765P7|MTSSL_HUMAN MTSSL_HUMAN MTSS1-like protein; 0.0 1188 92.57 0.958500669344043 1 coding 0 0 0 0 0.12814926481135 0.415178672828934 -4.84105400116175e-05 0.999171839167459 ATGTCTCAAGCTCCACCACGGCTCACTGTGCCTCTGCCCCCAGGTCGTGTGGACCATCCAGGGCTGTGTCCGGGGGACACAGTGCCCCTAAGCTCCTACCCCATCTGGGAGGACTTCAACTCCAAGGCCACGAAGCTGCATTCCCAGCTGAGAACCACCGTGCTGGCTGCTGTGGCCTTCCTGGACGCCTTCCAGAAAGTGGCCGACATGGCCACCAACACCCGAGGGGCCACGCGGGACATCGGCTCGGCGCTCACGCGCATGTGCATGCGCCACCGCAGCATCGAGACCAAGCTGCGGCAGTTCACCAACGCGCTGCTGGAGAGCCTCATCAACCCGCTGCAGGAGCGCATCGAGGACTGGAAGAAGTCGGCCAACCAGCTGGACAAGGATCACGCAAAAGAGTACAAAAGAGCGCGGCACGAGATCAAGAAAAAGTCTTCGGACACGCTGAAGCTGCAGAAGAAAGCACGCAAAGAGCTACTTGGGAAAGGAGACCTGCAGCCCCAGCTGGACAGCGCCCTGCAGGATGTGAATGACATGTACCTGCTGCTGGAGGAGACAGAGAAGCAGGCAGTGCGCCGGGCCCTGATTGAGGAGCGTGGCCGCTTCTGCACCTTCATCACGTTCCTGCAGCCCGTGGTGAACGGCGAGCTGACCATGCTGGGGGAGATCACCCACCTGCAGGGCATCATCGACGACCTGGTGGTGCTGACCGCGGAGCCGCACAAGCTGCCCCCCGCCAGCGAGCAGGTGATCACAGACCTGAAGGGCTCAGACTACAGCTGGTCATACCAGACCCCACCCTCATCGCCTAGCAGCTCCAGCTCCCGGAAGTCCAGCATGTGCAGCGCCCCCAGCAGCGGGAGCAGCGCCAAGGGTGGCGGAGGCCCCTGGCCCGGGGGCGCCCAAACGTGCTCACCCGGTCCCGCCTGTCGCTACCGCAGCCTGGCGCAGCCCGCCCCTGCCGCCCGCCTCTCCAGCGTCTCCTCCCACGACTCCGGCTTCGTCTCCCAGGAAGCCACCTACTCCAAGCCCCCCTCGCCCATGCCTTCAGACATCACCAGCCAGAAGTCCTCCAGCTCCGCGTCCTCTGAGGCCTCGGAGACCTGCCAGTCCGTTAGCGAGTGCAGCTCCCCGACCTCGGACTGGGCCAAGGCCGGCCCCCACGAGCAGCCCGCAGGCACCGCGCTGCAGCGGAGGAAGGACCGCGTGGAGCTCCTGCGAGACCCGGAGCTGGGCCCGGCCGGCGGGGGCGCCCCGGGCCCGAGTGGAGAGGAGGCCCCACGACCCCGCATGTCCCCCGCCACCATCGCAGCCAAGCACGGGGAGGAGGTGTCCCCTGCTGCCAGCGACCTGGCCATGGTGCTGACCCGCGGCCTGAGCCTAGAGCACCAGAAGAGCAGCCGGGACTCCCTGCAGTACTCGAGCGGCTACAGCACGCAGACCACCACGCCCTCGTGCTCCGAGGACACCATCCCCTCCCAAGGCTCTGACTACGACTGCTACTCCGTGAACGGGGATGCAGACGGCGAGGGGCCCCCCGAATTCGACAAGTCGTCCACCATCCCTCGCAACAGCAACATCGCCCAGAACTACCGCCGCCTGATCCAGACCAAGCGTCCAGCCTCCACCGCGGGGCTGCCCACCGCCTCAGGGGCGCCCCCCGGCGTGGCCACCATCCGCCGCACCCCGTCCACCAAGCCCACCGTGCGCCGCGCCCTCTCCAGCGCCGGGCCCATCCCCATCCGGCCGCCCATCGTGCCGGTGAAGACGCCCACGGTGCCTGACTCCCCCGGCTACGTGGGGCCCACGCGGGCGGGCAGCGAGGAGTGCGTCTTCTACACCGACGAGGCCGCCGCAGCCCTGGCGCCGGACCTGGCCAAGGCCTCCCCAAAGAGGCTCAGCCTGCCCAACACGGCCTGGGGCAGCCCGTCCCCAGAGGCGGCCGGCTACGCGGGGCTGGCGGCCCAGGACGACGAGGAGCAGCAGCAGCAGCTGGCCGCCAACCGGCACAGCCTGGTGGAGAAGCTCGGGGAGCTGGTGGCGGGCGCCCACGCGCTGGCCGAGGGCCAGTTCCCCTTCCCCTCCGCCTTGTCGGCCGCCCCCGCGGAGGGGACGCCCGCCCCACCCCCCGCCGCCCCCGGCGAGCCTCCGGCCGAAGACATGCTGGTGGCCATCCGGCGCGGGGTGCGGCTCCGCAGGACCGTCACCAACGACAGGTCGGCGCCCCGCATCTTGTGATGGCGCCTCCCGCCCCACTCCCCGGCCCGCCAAGGCAGGGGGCCGGGCCGGTGGGCCGCGGAGGCTCAGAGCAGAGGCACAGTCAGGAGTGAGCAGAGCCAGGCGAGGTTTTTTTCTTTTTTTTAAGTCACACGAGTCAAAGCCACTTTACTGGGAGGAGAAACCCAGCTTGGATTTCATGGTTTAAACAGGAAGTGACTTCTTAGACTGCGCCAGGACGGAGCCTGCGGGCCTTGAACTGGATTTGAAGCCTGTTTCAACCTTTTCTTGCCTACTCTGCCCCTCCTCTCCCTCCTGCCAGGTCCTGCCCTTTCCACACAAGGGCGAGCCACAGAGCCGTGCCCCGTGCCCCCAGCAGAGGGGCCTACCCACCTGGCAGGGCCCGCAGTGCACAGCTCAGGCAGCCCGGCCCAGCGCCTCCCCATCTCCCTGGGGACGGTGGCCCCCAGCCCCTGGCCAAGGCACCCCCCCCCCACGTCCTTCTCTGTCACCCCCTGTCACCCCCCCTCATCTCTGCCTCTCCCAGGCTCTCCTCCAACAGGGAGGCCGGGGGGCCATGGAGGGGCGAGGGCTACAGTGTCTGGGTTAATCAGAGGCTCCACAGAGCGGCTGGCCGTTTGGGGGGCCAGTGAAGTTAAGAGCCAGCCCACCTACTGGGGACGGGGGCCTGGGGCCCAAGTCGAGTCTCTTGGGGAGGACGTGCAGGGTGCCTGCCCGGAGGAGGGTGGGGCCCCTGAGACAGCTTGCCTGCCTGCAGATGCGGCTGGGGCGGGGCAACAGGGAAGGCCTGCGGAGGCCAGGCTGTCGGCCTACCGGCCTCCCAGGAGCTGCTCAGATCCCATCGTCATCCGGGCACGTGGGGACTTTTAACTCTGGTGACAGTTTCAGCTACCTTTGGGTCAGGGACTGAAACTGGAGAGGGTGGGGGGTGGGTTCTTTTATGAATATATAATAAAGTGAGCTGACCGGACAAGGACTGCGTGTGGGGACAGGGTAGACGGTACAGGGTGTGTCCAAGAGTGCCTGAGGGACAGAGGGCCCCTCGGTGGCCTGATGGCCCGTGGGAGGAGGAGGAGGGCCTGCACGGCTCCTGGGGGCCAGGGGGCGGGGTCGGTGTTCTCTGCAGCATCCAGAGCAAAACCACAATGCGCTGGGAAGGGGCCGGAGGCTGGGTCTCCCACCCGTTTGCTGCAGGCCAAGGGGGGGAGGGCTGCTGGGGGAGATTGGCCCTGACTGTTGTCAGAGGCGATGCCATCCCAGGGTGGTCCCGGGTGGCAGGACTGAGGTGGAGGGAGTGCACCCCTCCACCCGCACAGCACGTTGCGCCAACTCTAAGCAGGTAAAAGCACGTGTGCCAAGGGCAAGCGGAGGGCTTCCTGTGACCCGCAGGCCCGCTGAGAGCAGCCATGCTGGCAGGGTCACGGGGCAGGGGCTCCTGGGGTCAGGAGAGCTGGCTCTTCCTGGTCTGGATGGACCCAGGGCTCCTGGTAGTTCTTGTGCCGGAAACGGGTCTAGGCACAGCCGCCAGGAGGGTGTGGGGAACCAGGGATTCCTCTGAGGGGCTCCCCAGAGGTGGGTGAAGGACGGTACCTGTAAGTCGCTAGGTCAGAGAAAGGAGCCTCACTGAGCTGAGCTCACCACACCTGGAGGAGGGCCGGGGGAGCAGATGGCCTGCACTCGGAGGCTTGGGGGCAGAGTGTATACTGCCCCCCGCCCCGCCAGGGTTTGCCCAGGTCGGCTGGTTTAAGACGCAGGTTTTCTGATGTGAGCAGGGTAAGGGGCAGTGGGGGGGGGGGCGGGGTACCCGGGTCCCCATGAGGAAGAGCTTGCCCTGAGGAGGGGTGTGGCCTCAGGGACCCGGGGGGAGGGGGTGGGCA EMBV3_16455 AGGTTGTGGAAGGAAAGCACCTTCCACCGGAGGTGTCTGAGCTGACTCTTTCCTGCTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32087 TCGCTCGAAACAGCCGCAAGATGGCCATGCGTGCCAAGTCCAAGTCCTGCCATGACCTAT Gene GeneID:505165|RRAD:NM_001045913:117_cdna Constitutive 1 NULL GeneID:505165 18 GENE RRAD MGC137228 Ras-related associated with diabetes EMBV3_16937 GCGGAGCTCTGCGGACCTTCCTCGAGCGCCAGGTGGCCTTAGACATGCATCTGCCAGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11763 TGGCTGCTCATTTGCTTTCAGAACTGGTTTTATCCTGTAAGCTGGTCGCTGACTGCCTGG Gene GeneID:511412|MTPAP:XM_002692146:137_cdna UTR3_Alt 2 NULL GeneID:511412 13 GENE MTPAP PAPD1 mitochondrial poly(A) polymerase EMBV3_21215 CATGTCTACCTGCAAGAGAAGGGATACAGCGACTGTGCCTGGGAAATCGTCAGACTGGAA Gene GeneID:281847|IFNW1:NM_174351:80_cdna Constitutive 0 NULL GeneID:281847 8 GENE IFNW1 NULL interferon, omega 1 EMBV3_32771 GGGAAATTTCCCCAGAAGATCAAAGTTGCATTCTAATGGTATTTAAATATTTAAGAGATG Gene GeneID:507040|LOC507040:XM_002684988:95_cdna Constitutive 0 NULL GeneID:507040 1 GENE LOC507040 NULL similar to Uncharacterized protein C3orf33 EMBV3_09704 TGCGGAACAACCTGACGTTTCTGGTGTAGAGATATTGCTTATGGCACCGTCCATTCAATG Gene BVV0102_369873 + 0 NULL GK000014.2:20639304-20738813 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15837 CTAGCTTGAGCTGGGATCCTGATATCCTTCCGTCTTGTCGCTGCTATTCAGCCTTCCCAT Gene GeneID:528555|CASQ2:NM_001035374:59_cdna UTR3_Alt 2 NULL GeneID:528555 3 GENE CASQ2 MGC128222 calsequestrin 2 (cardiac muscle) EMBV3_28314 CAAAGACTTCTGCCGGGACCTTCTGTGGCTGTGACTTGGTGAACTGGCTCATTGAAGTTG Gene GeneID:538798|GPR155:XM_002685317:166_cdna Constitutive 0 NULL GeneID:538798 2 GENE GPR155 NULL G protein-coupled receptor 155 EMBV3_17680 GCCCCCAAATCATGCACTGTTGACCACTGACCAGTCTGTATTACGATTCACGGGTGAATT Gene BVT0102_139773 + 0 NULL GK000029.2:46819299-46821784 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165634 TCONS_00165632 TCONS_00165633 1 XLOC_100577 Coding TCONS_00165634 XLOC_100577 Coding Coding CPT1A 29:46820297-46881211 = TSS123686 4657 1 TCONS_00165634_4 875 0.00622718488297187 20 0.923875034885821 1.45713088630095e-05 7.86791176414829e-05 5.77732756034552e-08 1.75564138766009e-08 1.06859278112758e-08 2.271903753076e-05 0.000159102597411389 1.71294493739966e-10 0.000757272582613264 0.000341111076177921 4.1864448159118e-05 0.000204999870537859 2.68721268381334e-05 0.000140724096329588 1.265152755697e-08 0.00152078697665193 0.001701213597405 0.00319277685524915 1.81115120226002e-08 2.08139129150958e-08 6.45115710903401e-09 0.00131566183419696 0.00118645956226647 0.00172648092622962 0.000726288548400001 0.000309227021758565 1.25042451208299e-08 0.000403863118558895 8.42701464326298e-08 0.000539341421275258 XM_002699420.3 CPT1A PREDICTED: Bos taurus carnitine palmitoyltransferase 1A (liver) (CPT1A), transcript variant X1, mRNA. 0.0 8089 100.00 0.962851621215375 NM_001876.3 CPT1A Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), 0.0 2946 76.75 0.813613914537256 TCONS_00165634_4 sp|P50416|CPT1A_HUMAN CPT1A_HUMAN Carnitine O-palmitoyltransferase 1, liver isoform; 0.0 1484 89.65 0.882285714285714 1 coding 0 0 0 0 -0.0637404405110819 0.628977117974847 -0.0703210556330686 0.176386867296762 ATGCCTATAAAGGTCGAGCATGAGCTAGGCACTGTGCTGAGCGCGTTTATGGGCATAGCCCTAATGAGCTGGCCCATTTTTCAGATGAGTAAACTGAGGCCCCGCCCCCGGCCCGCCTGGCGCCGGGAGTCGCCGCCCGCGCGGCCGCAGCCCCGAGCGCCTCAACCAATCGGCCTCTGCCCGCGCCGGGAGCATTCAGCCTCGCCCGCGGTCCTCCCACCCCCGGCTCCCGCTCGTCGCTCGCTCACTCGGCCGCCGCTGTCTCTGCCGCTGCACCTCTGTCCACAGACTCGGAGCTCGCTGACCATGGCGGAGGCCCACCAAGCCGTGGCCTTCCAGTTCACAGTCACTCCAGATGGGATCGACCTCCGGATGAGCCATGAGGCCCTCAGGCAGATCTATCTGTCTGGTCTTCATTCCTGGAAGAAGAAGTTCATCAGATTCAAGAATGGCATCATCACCGGCGTGTACCCAGCGAGTCCCTCCAGTTGGCTCATCGTGGTTGTGGGCGTGATGTCGACCATGTACGCCAAGATCGACCCCTCTTTGGGAATAATCGCTAAGATCAACCGGACCCTGGACACGACTGGCTGCATGTCCAGCCAGACCAAGAAGGTGGTGAGCGGCGTCATCTTCGGCACGGGGCTGTGGGTGGCCCTCATCGTCACCATGCGTTACTCCCTGAAGGTGCTGCTGTCCTACCACGGCTGGATGTTCACCCAGCACGGCAGGTTGAGCCGCACCACCAAGATCTGGATGTTTATGGTCAAGATCTTCTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACGTCTCTGCCGCGCCTGCCCGTGCCAGCTGTCCAGGACACCGTCAACAGGTACTTGGAATCTGTGAAGCCTCTTATGAAGGAGGGAGACTTTACACGGATGACGGCTCTGGCACAAGATTTTGCTGTCAATCTGGGACCAAGATTGCAGTGGTATTTGAAGCTAAAATCCTGGTGGGCTACCAATTATGTGAGCGACTGGTGGGAGGAATACATCTACCTCCGAGGACGAGGGCCGCTGATGGTGAACAGCAACTACTTCGCGATGGACTTGCTGTATATCATACCGACTCACATCCAGGCGGCAAGAGCTGGCAACGGGATCCACGCCATCCTGCTTTACAGACGCAAACTGGACCGGGAGGAAATCAAACCGATTCTTCTTCTGGGGTCTACGATTCCGCTCTGCTCCGCCCAGTGGGAGCGCATGTTTAATACTTCTCGGATCCCGGGAGAGGAGACAGACACCATCCAGCACCTGAGGGACAGCAAGCACATCGTCGTCTTCCACCGGGGCCGCTACTTCAAGGTCTGGCTCTACCACGACGGCCGGCTGCTGAGGCCCCGCGAGATCGAGCAGCAGGTGCAGCGGATCCTGGAGGACCCGTCGGAGCCGCAGCCCGGGGAGGCCAAGCTGGCGGCGCTTACGGCGGCGGACAGGGTCCCCTGGGCCAGGTGTCGCCAGGCCTATTTTGGACACGGGAAAAACAAGCAGTCTCTGGATGCCGTGGAAAAAGCAGCGTTCTTCGTGACGTTAGACGAAACCGAGCAGGGATACAGGGAGGAGGACCCGGAAACGTCGATGGACAGCTACGCCAAGTCCCTGCTGCATGGCAGGTGTTTCGACAGGTGGTTTGATAAATCATTCACGTTTATCGTCTTTAAAAACGGAAAGATGGGCATTAATGCGGAGCACTCCTGGGCCGATGCGCCCATCATGGGTCACCTTTGGGAGTACGTCATGGCCACAGACAGCTTCCAGCTGGGTTACACGGAGGATGGACACTGTAAAGGAGACACCAACCCGAACATCCCGTACCCTACCCGGCTGCAGTGGGACATCCCGGAGGAATGTCAGGAGGTCATTGAGACTTCACTGAGCAGTGCCAACCTCCTGGCCAACGACGTGGATTTCCACTCCTTCCCATTCCGCACTTTCGGTAAAGGGCTGATTAAGAAATGTAAAACCAGCCCGGACGCCTTCGTACAGCTCTCGCTCCAGCTGGCTCATTACAAGGACATGGGTAAATTTTCCCTCACCTACGAGGCCTCCATGACCCGGCTGTTCCGAGAGGGCAGAACGGAGACCGTGCGTTCCTGCACCGCTGAGTCGTGCAGCTTCGTGCTGGCCATGGTAGACCCCACACAGACGGTTGAACAGAAGCTCAAGTTGTTCAGGATCGCGTCTGAGAAGCATCAGCTTCTGTACCGCCTGGCGATGACCGGTGCGGGGATCGACCGCCACCTCTTCTGCCTCTACGTGGTGTCCAAGTACCTCGCGGTCGACTCCCCTTTCCTGAAGGAGGTCTTAGCTGAGCCTTGGAGATTATCCACCAGCCAGACCCCTCCACAGCAGGTGGAACTGTTCAATTTGGATAGGAATCCAGACTACGTGTCGTGCGGAGGGGGCTTCGGGCCGGTTGCTGATGACGGCTATGGGGTGTCGTACATTCTCGTCGGTGAGGACCTCATCAATTTCCATATATCCTCCAAGTTCTCCTGTCCTGAGACGGATTCGCATCGCTTCGGGAAGAACCTGAGAGAAGCAATGACCGACATCATCAGTTTGTTCGGGTTCAGCCCCAATTCCAAAAAGTAAATCTCTTAGCACTTCTGGGAAGGAAAAGAAGTTCTTCTGATGAAAAACCAAATGAAAAATAGCTCTGTGTCCTGACTGTATTTCAGGATGAAAATTTGTTTCCTTCCAGCGAAGGTTTGGTGTTTTTGCTTTTCTAGGACAGCAGGCTCCACGCCGTGAAGTATAACCCTACTCCTTCTAAGCAGCTCCTAACCTGGGGGACATTGGATGAAGTCCCCCCTAAAGTCTTCCCATCACCTTACATTCCTTAAGGGACAAGCGATTTTTGGAATGAGTGGGGTTGTGGCTTCATACTCGCTGGAACCAGACCGGCACGCTTCCTTGGCTGCCACTGGACACCTGGTACTTACGGGCACTTAATTTTATCAGAGCAGTGTAAACATTTGTTTCCTTCCAAGAGAAAAGCCTCTTTTAAGTTGCAGATATTAGCAGTTAATAGCCGACGCACATGCAGCGCACTAACCGAGACAAGCTTTGTGATTTGGAATCTGTTCTGTCTGTGGTCACTCTCACTGTCTAGTCCGGTCATCTGCTTTTGCCTCTCCGTGTTTGAAGTCTTCAAAACCCGGTGCCTTAAAACAGAAGGCCCTAAGCATAAGGGAGGCCACGCAAGAGATTTATTTTAAGTCTTTGGGTGGAATTGTGGGTGTCTCACTCCCGTCTCAATTTCCTGGGTGGATATCCCTGTGTAGGGATTTTCCTGTCATGTCCCCATGTCCCAGAGGGACCAGTCCCCTTACAAGGGCAGCTGTGAGCCGGATTCCCTTCCATCAGACTGCCTTCCTCAAGCTTCATTGTTAAGCTACGAAAAAAGATGTGGGCGCGTGTCAGAAATGGGGAGCAAGGCATGTGATGGTTGAAGATAGCGTGTCTGGATAACACACATGGTAGATGCTTCCGGATTCCTGCTTACCCAGCCTGCCAGCAGGGATAACAGGACAGTGGCCACTGAGAAAGGAACAAACTTGAGAAGAGCGAACCTCAGGTAGTCAGGGCTGGCCGTCCCACCTGCTGAGAGAGGAGACCCACTCCCGTCTCCAGGGAGACAGAGGGAGATGGGTCATCTCGGCGACCTCCTAGAATGTCGCAGGTGACGGGTGCTGAGTTTAACACAGCCTACCCTTCCGATGCGTGTGCCTTGCTCGAAAGAGAGATTGACCAAAAAGTGATGACGCGCTGCATCGTCTTCAGTATTTAATGCAAAAAGAAAGAATCATGGAGTGAAATAGACCCACTGCCTCTGGGCTGTCATGACAGGCTTAGCTGTCCATTTTTAAAATCATGTATTTATTTTTCTGAGCACTCTGTTCTGGTGGGGCTCATGTCTCTAAGAGTCCTGTACTCCAGTGATTTGGTGATGAGGCTGAACCGATGGGGCAGGGGCAAGGCACTGGCCACAGGGCACGTGCATATTTTATTCGTGTACATGTTGTGATGTAAACCCCCCCTAAATGGGCCAAAGACTCTTTCTGTTAAAAGCAAGCAGAAATGGGAACAGACAAAAAAGCAAAAAAGGACATCTAACCACCATAGCAACAAAAGATCCTGTTCATCTGTGGTATGTAGTCAGGGGGGCATCGGGGGATACGGGAGCCCCCCTGACTCAGCCAGGCGTGGCTTCCAGTTGAAGCCAGGGCCCCCAAATCATGCACTGTTGACCACTGACCAGTCTGTATTATGATTCACGGGTGAATTCGAGAGCAGACATGTTAGCACTCAAACCTATTTGGGCTTGTCTCTCAGGTTTTAAATATTTCAAATGTAATTTTCACTAATCCATGCAGTCATCAATGCAATTTTATATTCCTTAAAAGGAAGAAGACTGGGTTTGTACTGTACATGTTGAAAGCAGGAAGTTAAGAGTATTCATGTATTTAATTTAATTTGGAACAAGCCATAGTCTTAACAGAGCTGTGGTCTGAATTTGTTATGTTGGACTGGCCATTGCATGTAAATATAAGGTGCCCTTTTGGATGTAAATCTTAGATACGCAGTATGAATGTTACCATTAATAAAAACATTAACCACA EMBV3_06820 CCCCCGCCCTCCAAGTCCAACCTCCTATCTACTCTGGCGCTGAAATGGATTAATAAGGAA Gene GeneID:100296471|LOC100296471:XM_002692214:1428_cdna Constitutive 0 NULL GeneID:100296471 13 GENE LOC100296471 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_14322 GAAGCTCGAGGCCCTTTGCCCCTGACCTTTGGGGCTTCTCCAGATTTTGTATGCTGTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26505 GGACGGAAGAAGGCCGGGAGCCCCAGCCCGAGCACCGCCCTTGCGGAGAGCAGCAGCTCC Variant GeneID:512099|TBC1D16:XM_002696151:78_cdna 617^729 1 EMBV3_15617 GeneID:512099 19 GENE TBC1D16 NULL TBC1 domain family, member 16 EMBV3_05965 AGCGCTGCCGCAAGAGGAAGCTGGACTGTATTCAGAACTTAGAATGTGAAATCCGCAAAC Gene GeneID:538296|BACH2:XM_002690189:21_cdna Constitutive 0 NULL GeneID:538296 9 GENE BACH2 NULL BTB and CNC homology 1, basic leucine zipper transcription factor 2 EMBV3_03849 CACACCATGTTTGCCTTTTCCAAACTATGCTACTGTGTCTTTGAGGGGCCTGGGGAGATC Gene GeneID:281507|STAR:NM_174189:17_cdna UTR3_Alt 2 NULL GeneID:281507 27 GENE STAR MGC134013 steroidogenic acute regulatory protein EMBV3_20636 AGGGGGGCCTGACCTATAACACCACCTGCTGCTCCATGGCTGCCCCTCCTTCCATCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26263 AGGCCCTCTTTGTCACCCCAGTGAAGTAGAACAAGTCAATTCTATACCAAGTGCTCCGGG Gene BVT0102_159254 + 1 EMBV3_14913 GK000011.2:99103592-99131532 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34549 CTCGCTGTGGCTTGATTGGGGATAAAGGGTATTTTCACTTCTTAGGGGTAGGTCCAGCTC Gene GeneID:100337330|LOC100337330:XR_083975:218_cdna Constitutive 0 NULL GeneID:100337330 19 PSEUDO LOC100337330 NULL DNA-directed RNA polymerase II A-like EMBV3_20964 CCTCTATTGATGCCATTCTCCACAGATAGTAAACCATCCGCTCCCTCACCTTCAGCCTTC Gene GeneID:539679|KPNA1:NM_001081733:83_cdna UTR3_Alt 2 NULL GeneID:539679 1 GENE KPNA1 MGC152064 karyopherin alpha 1 (importin alpha 5) EMBV3_26387 GTGTGAGTTTAGGGTGGTGTTTTCCAAGTTTCCTCAGATTGATACTGTTGGCAGAATCCC Gene BVV0102_260870 + 0 NULL GK000017.2:46029471-46041796 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077139 TCONS_00077144 TCONS_00077140 TCONS_00077143 TCONS_00077141 TCONS_00077145 TCONS_00077142 TCONS_00077146 1 XLOC_046994 Coding TCONS_00077140 XLOC_046994 Coding Coding EP400 17:46039501-46109555 j TSS57739 10227 1 TCONS_00077140_10 2308 49 0.854710005281715 0.000806524447464398 5.35122334958518e-05 0.000280934822886561 3.53386415566158e-52 0.000181607753735561 0.000221564887161187 0.000245234740795761 0.000264384729322735 0.000105492401627053 0.000201944296932684 0.000207575900696862 3.89309430599559e-06 1.57773216039086e-05 0.0001750101575231 4.94235267129559e-05 0.000969358643853528 0.000122172876691496 0.00193867901719591 3.69077931094317e-05 8.77541143003839e-07 1.41962688621618e-37 0.000261974352822495 6.57955930976359e-61 0.000359084050621952 0.0012213662048057 8.89204367278351e-15 0.000647937364119988 0.000276819842925066 0.000116472847073557 0.000287431836000973 XM_005217669.1 EP400 PREDICTED: Bos taurus E1A binding protein p400 (EP400), transcript 0.0 1.807e+04 99.73 0.982301750268896 NM_015409.4 EP400 Homo sapiens E1A binding protein p400 (EP400), mRNA. 0.0 7434 81.96 0.720348098171507 TCONS_00077140_10 sp|Q96L91|EP400_HUMAN EP400_HUMAN E1A-binding protein p400; 0.0 2880 85.32 0.736568457538995 0 coding 0 0 0 0 -0.0230452988921647 0.851573084848455 -0.0473100630770204 0.354384208637359 GACAGAAAGCCTGGATTACATGGCCAGGGTGGCCAGCCAGCGCTGCAGGGGCTGTGACTGGCTCCCGGCATTGACTACGGAGCCTTCTGTGTGCCTTGAGAAGGAACCCCCTTCTCCCACCAGGGTGGCTGAGCCTCTCCCCAGGCAGGCTGGAGACGGTGGCACCGACCAGACCGCCCGTGGACCCCACCCAGTCCTGCCTGCGGCCCCCGCCCTCCACCTCCACTACCTCGACTGTTGCCCCCGCCAGTGGCTCAGGCCTGGGACCTTCACCTGCACGCGCCTCCCCGGTGAATAGACCCTCCTTGGCAACCAACAAGTCACTGTCTCCAGTCACCGCCCGCGCCCCGGGGGCAGCCGTGTCGGCACCCCCAAAACCACAGAGCCCAGCTCAGAATGCTGCCCCGCCCCAGGACAGTTCTCAGGATAAGCTGGCAGAACAAATAGCCTTGGAAAACCAGATCCATCAGCGCATAGCGGATTTAAGGAAGGAAGGCCTGTGGTCCCTCCGACGGCTGCCCAAACTTCAGGAGGCCCCACGGCCCAAATCGCACTGGGACTACCTGCTGGAGGAGATGCAGTGGATGGCCACGGACTTCGCCCAGGAGAGGAGGTGGAAGGTGGCCGCTGCTAAGAAGCTTGTCAGAACTGTAGCTCGTCATCATGAAGAGAAGAAGCTTCGGGAGGAAAGGGGGAAGAAAGAAGAACAGAACCGATTGAGGCGAATAGCTGCGTCAACTGCTAGAGAAATAGAGTACTTTTGGTCAAATATTGAACAGGTCGTGGAAATAAAACTACAAGTAGAATTAGAAGAAAAAAGGAAAAAGGCTTTAAATTTACAGAAAGTTTCCCGGAAAGGAAAAGAGTTGAGACCTAAGGGACTTGATGTACTACCGGAAAACTTTCTGGATTCGGGAATATCTGGAAGAAAAAGAAAAGCGAGTACGTCTTTAACTGATGATGAAGTGGAAGATGAGGAGGAGACGATTGAAGAGGAAGAAGCGAATGAAGGGGTTGTGGATCACCAAACAGAGCTGTCTAATCTAGCCAAAGAAGCTGAATTACCGTTGATCGATTTGATGAAGTTGTATGAAGGTGCCTTTCTGCCAAATTTCCAGTGGCCCCAACCTAAGCCTGACAGTGAGGAGACAAGTGAAGAAGAAGACATGGAAGACTGCCCAGGGGACCGGGAGAGCCGGAAGGATGTGGTTCTCATCGACTCGCTCTTCATCATGGACCAGTTTAAAGCTGCAGAGAGAGTGATTGTCGGGAAACCTCATACCAGGGACATCGCGGAAGTGACCGCTGTGGCTGAAGCCATCCTGCCCAAGGGCAGCGCTCGGATCAGCACCGCGGTGAAGTTGAACGCCCCGGCCCTGCTGTATGGCGCCCTCAGGGATTACCAGAAGATCGGCCTGGACTGGCTGGCCAAGCTCTACCGCAAGAATCTCAATGGCATATTGGCAGATGAAGCTGGGCTTGGGAAAACAGTGCAGATCATTGCCTTTTTTGCTCACCTAGCCTGTAACGAAGGCAACTGGGGCCCTCACCTTGTCATTGTGAGGAGCTGCAACATACTCAAGTGGGAGCTCGAGTTGAAGCGTTGGTGTCCGGGGCTCAAAACGCTCTTGTATGTTGGCAGCCATAGAGAACTCAAGGCAAAGAGACAGGAGTGGACGGAGCCCAACAGCTTCAACATCTGCATCACATCCTACAAGCAGTTCTTCAAGGGCTTCGCGTCCTTCACGCGGGTGCGCTGGAAGTGCCTGGTCATCGATGAGATGCAGCGCGTGAAGGGCATGACCGAGAGGCACTGGGAGGCCGTGTTCACCCTGCAGAGCCAGCAGCGCCTGCTCCTCATCGACGCGCCCCTGCACAACACCTTCCTGGAGCTGTGGACCATGGTGCACTTCCTCATCCCCGGCATCTCCAGGCCCTACCTGCACTTCCCCCTGAAGGCCCCCAACGAGGAGAACCAGGACTACTATCACAAAGTGGTCATCCGGCTGCACCGGGTGACACAGCCCTTCATTTTGCGGAGAACTAAGAGAGACGTAGAGAAGCAGCTGACGAAGAAATATGAGCATGTCCTCAAGTGCCGCCTCTCCAATCGACAGAAGGCCTTGTACGAGGATGTCATCCTGCAGCCTGGGACCCAGGAAGCGCTGAAGAGCGGGCACTTTGTGGACGTGCTGAGCATCCTCCTGAGGCTACAGCGGATCTGCAACCACCCTGGGCTGGTGGCACCCCGGCTCCCGGAGTCCTCCTACACGGCAGGGCCGCTGCAGTACCGCTCCGCCTCGCTCGTCCTGAAGGCGCTTGACAGAGACTTCTGGAAGGAAACGGACCTTTCTATTTTTGATCTTCTTGGCTTAGAAAATAAAATGACTCGCCATGAGGCAGAACTGCTGGGTAAGAAGAAGGTGACACGGAAACTCTTTGAGGAACTGTTCACTGCGCCGCCACCATCAAGCAGGCCGGCGGCCGTCAGACTGAAGCCCAGCAGGTTGTTCCAGGCTGTGCAGTATGGCCAGAAGCCTGAGGGCCGCACCGTGGCTTTCCCCAACACACACCCACCCCGGACGGCCACCCCTGCCACAGCCACGGCCACGCCACAGGGCCACGTTCGAGGACGGCCACCCATTGCCACATTCTCTGCAAATCCGGATGCAAAAGCGGCAGCAGCCCCGTTTCAGACCTCTCAGGCCTCCACCGGTGCTCCGAGACACCAGCCTACCTCGACCTTCAGCACAGCACCTAGCCCAGCCCATCCTGCGAAACTGCGGGCTCAGACCACTGTCCCAGCCTCCGCCCCGGGCCCACCCCAGCCCCAGCCCCAGGCCCCCTCGCACCCGGCCGGGCAGAGCGCGCTGCCTCAGGGGCTGGTGCTCACCTCGCAGGCCCAGGCGCGCCTGCCGAGTGGGGAGGTGGTCAAAATAGCCCAACTGGCTTCCCTCGCAGGCCCGCCGAGCCGCGTCGCCCAGCCAGAGACCCCCGTGACACTGCAGTTCCAAGGCAACAAGTTCACCTTGTCGCACAGCCAGCTCCGGCAGCTCACGGCCGGCCAGCCCCTACAGCTCCAAGGCAGTGTGCTCCAGATTGTGTCGGCGCCTGGGCAGTCCTACCTGCGCCCTCCTGGCCCTGTGGTGATGCAGACCGTGTCTCAGGCGGGTGCCCTGAATGCCCTGGGAAGCAAGCCTCCAGCCAGTGGCCCAAGCCCCACGCCTGTGACCCCGCCAGTGGGTGTGCCTGGTCGAGTGGCAGTCAGTCCCCTGGCCGCAGGAGAACCCGGAGCGGCCTCCAAACCAGCTTCTCCTGTAGCTGGCCCCACCCAGGAGGAGAAGAGCAGACTTCTGAAAGAGCGGCTGGACCAGATTTACTTCGTCAACGAACGGCGCTGCTCCCGCTCCCCCATCTACGGCAGAGACTTGTTGGGGATTTGTTCCTTGCCTGGCAGAGAGCAGGTGCCTTGGTTCCGGGCTTCTGACCGTGGTCACGGGAAGGGGGCTGGGCCTGCAAGCAGGCACACATCGCCCTCGAAAAGTCACAGGGACCTGATTTTGACGCTGACTCAACGTCAAGAATCCCTCCAGGATGTCATCGACAGGGTGGTGTGCGTGATCCCGCCTGTGGTAGCCGCGCCCCCGCACTTGTGGGTGGCGAGGCCACCCTCCCTCTACAGCCACAGGATGCGGCTCTTCCGGCACTGCCTGCGGGAGCACACAGCGCCCTACGCACAGCAGCTGCAGCGGATGACAGCTCTGCACTCGCTCCGGTTCCCCGAGCTGAGGCTGGTCCAGTTTGACTCAGGAAAGCTGGAGGCCTTAGCCATCTTACTTCAGAAGCTGAAGTCTGAAGGACGCCGAGTGCTGATCTTATCACAGATGGTTCTCATGTTGGACATCTTAGAAATGTTCTTGAATTTCCATTATCTCACCTACATAAGAATTGATGAAAACGCCAACAGTGAACAACGGCAGGAACTGATGAGGAGTTTCAACCGAGACCGGCGCATCTTCTGCGCCCTCCTCTCCACACACAGCCGCGCCACAGGTGTAAGCCTGGTGGAAGCGGATGCGGTGGTCTTCTATGATCACGACCTCAACCCCGTGATGGACGCCAAGGCCCAGGAGTGGTGTGACCGGATAGGGCGGCGCAAGGACGTGCACATATACAGGCTCGTGAGTGGCAATTCCATTGAAGAGAAGTTGTTGAAAAATGGCACCAAAGATCTGATCCGAGAAGTGGCTGCTCAGGGAAATGACTACTCCATGGCGTTCCTCACGCAGCGGACGATCCAGGAGCTGTTTGAGGTTTATCCACCCATGGATGATACTGGCTTCCCAGTGAAGGCCGAGGAGTTTGTCGTCCTTTCTCAGGAACCTTCTGTTACAGAAACCATTGCACCCAAAATTGCAAGACCTTTCATAGAGGCCCTCAAGAGCATCGAGTACCTGGAGGAGGAGGATGCCCAGAAGCCGGCTGAGGAGGCCGTGCCCGGGTCGCCTGACTCCAGTGGTTCCAGGTGGGACGAGGAGCCCTCGCAGCTGGAGGAGTTAGCGGACTTCATGGGGCAGCTCACACCAATTGAAAAATATGCTTTGAATTACCTGGAATTATTCCATACTTCCATTGATCAAGAAAAGGAGAGAAGTAGTGAGGGTGCCGTGATGACCGCTGTGCGTGAGTGGGAGGCCCGGAATGCACAGAGCCTGCGGGAGCAGGAGGCCAGGGCGCGGCTGGAGCAGGAGCAGGAGCAGCTCCTCACCTACACCCGGGAGGACGCCTACAGCGCGGAGTTTGTGTGTGAGGGCGCCGACGGGCAGACGGAGGTCATGCCGGACGACAACGACATCTACATCGACTCGGTCATGTGTCTCATGTATGAAACCACGCCCATCCCCGAGTCCAAGCTGCCGCCCGTGTATGTGAGAAAGGAGCGCCGCCGACACAAGACGGACCCCTCAGCCGCAGGCAGGAAGAAGAAGCAGCGGCACGGGGAGGCCGTGGTGCCCCCACGGTCACTGTTTGACCGCACGACCCCCGGCATGTTGAAGATCCGCCGGGAGGGCAAGGAGCAGAAGAAGAACATTCTGCTGAAGCAGCAGACACAGTTTGCCAAACCTCTGCCCACTTTTGCCAAACCGACCACTGAGTCCGGACCTGACAACCCCGAGTGGCTCATCAGTGAGGACTGGGCTCTGCTGCAGGCCGTGAAGCAGCTGCTTGAGCTGCCTTTGAACCTCACAATTGTGTCCCCGGCCCACACGCCCAACTGGGACCTGGTCAGCGACGTCGTCAACTCCTGCAGCCGCATCTACCGCTCCTCCAAGCAGTGCCGGAACCGCTACGAGAATGTGCTCATCCCCAGGGAGGAGGGCAAGAGTAAGAACAACCGTCCTCTGCGCACAGGCCAGATGTACGCCCAGGACGAGAATGCCACACACACCCAGCTGTACACGAGTCACTTTGACCTGATGAAGATGACCGCCGGGAAAAGGAGCCCCCCCATCAAGCCGCTGCTTGGCATGAATCCCTTTCAGAAAAACCCCAAGCATGCTTCTGTATTGGCGGAAAGTGGCATCAACTACGACAAACCCCTGCCTCCTATTCAGGTCGCGTCCCTCCGGGCAGAGCGCATTGCCAAGGAGAAAAAGGCGCTGGCCGACCAGCAGAAGGCACAGCAGCCGCCTGTGACACAGCCCCCACCACCCCCGCCTCAGCCGCAGCCCCCGCCGCCCCAGCAGCCGCCTCCGCCTCTGCCCCAGCCCTCAGCAGCAGGCAGCCAGCAGCCCGCGGGGCCGCCTGCCGTCCAGCCCCAGGCTCAGGCACAGCCCCCTGCACAGCCCGCGCCACCCCCACCAAAGGCACCCCCTGCGATCACGACGGTGGGCAGTGCCGCAGTGCTGGCAGGAGCCATCAAAACGTCCGTCACAGGGACGAGCATGCCCACGGGCACCGTGAGTGGAAATGTGATCGTGAACACCATCGCTGGCGTCCCCGCCGCCACCTTCCAGTCCATTAACAAGCGTCTGGCTTCGCCCGTGGCTCCTGGAGCCTTAACTACCTCGGGAGGCTCTGCTCCTGCCCAGGTGGTCCACACCCAGCCTCGAGCAGTTGGTTCCCCAGCCACGGCCACATCCGACCTGGTGTCCCTGGCACCGACTCAGGGTGTTCGCGCGGTCACCTCAGTGACGGCCTCGGCTGTGGTCACTACCAGCCTGACCCCCGTGCAGACCCCGACCCGGTCTTTGGTGACTCAGGTGTCCCAAGCCACAGGGGTCCAGCTCCCGGGGAAAACCATCACGCCCGCACACTTCCAGCTCCTTCGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGCCTCTCAGGTGCAGGTCCCGCAGATCCAAGGCCAGGCCCAGTCGCCGGCACAGATCAAGGCTGTGGGCAAGCTGACGCCGGAACACCTGATCAAAATGCAGAAGCAGAAACTGCAGCTGCCCCAGCAGGCGCCCCCAGCACAGGCCCCAGCGGGGCCCCCGCAGCCAACGGCTCAAGTGCAGGTGCAGCCCCCGCAGCCCACGCAGCAGCAGAGCCCCCAGCTCACCACGGTCACGGCCCCGAGGCCCGGCGCCCTGCTCACGGGCACCACCGTGGCCAACCTCCAGGTGGCCCGGCTCACCCGGGTCCCCACTTCACAGCTGCAGGCGCAAGGGCAGATGCAGGCCCCAGCACCCCAGCCGGCCCAGGTGGCGCTGGCGAAGCCCCCGGTGGTGTCAGTGCCAGCAGCTGTGGTCTCCTCGCCGGGCGTCACGACTCTGCCCATGAACGTTGCTGGGATCAGTGTGGCCATCGGGCAGCCGCAGAAAGCCGCAGGACAGACTGTCGTGGCCCAGCCTGTGCACGTCCAGCAGCTGCTGAAGCTCAAGCAGCAAGCCGTCCAGCAGCAGAAGGCCATCCAGCCGCAGGCTGCCCCAGGCCCTGCCACTGTCCAGCAGAAGATCACAGCACAGCAGATTGCTGCTCAGGGCCAACCACAGAAGGTCACCTATGCCACCCAGCCAGCCCTTAAAACCCAGTTTCTCACCACACCCATCTCCCAGGCCCAGAAACTGGCCGGGACCCAGCAGGTGCAGACCCAGATCCAGGTTGCAAAAATCCCTCAAGTTGTCCAACAGCAGACACCCGTGGCCAGCATCCAGCAGGTCGCCTCTGCTTCCCAACAGGCTTCCCCTCAGACTGTGACTCTCACCCAGGCGACAGCTGCTGGGCAGCAGGTCCAGATGATCCCTGCGGTGACGGCGACAGCACAGGTGGTGCAGCAGAAGCTCATGCAGCAGCAAGTGGTGACCACAGCGGCCGCCCAGCTGCAGACCCCTGGTGTCCCCACCCCTGCCCAGGTGCCAGCCGCCTCCGACAGCCCGAACCAGCAGCCCAAGCTCCAGATGAGGGTCCCTGCCGTCAGGTTAAAGACGCCCACCAAACCTCCGTGCCCCTAGTTGGGACAGAGGGGCAGCCCCAGGCGGGCTACCTGTGCGTTCCACCGTCCTACCAAGATGGGATAGACTTTATTTACTGAACCCTGGGACTGGGTCCTGTGGGATGTTCAGCACCTGGAGCGGCAATTCTCAGCGAACACCCTTTCTGTGTTACGTAACTGATCGAAAAAGTGACAGTGGCAGTTTTTCCTAGGTGTTTGACCTTTAGTTTCTCCTCCAGAGCAATAGTGCTGGGTCTTGAAAGCCAGCTAGAATTTCTCTGTTAGTGTACAGTGTTTTGCATGTTGCAAGCAGCCATTTGGAAGGTGCAGTGAGTCATAAAGTAGACCATAGAAGCTAAAACGTGGTCTGACAGCATCTGCCTCTGTTTGGTTCTTTATTCCTATTTGAAAACACAGTATGGGAGGAGAAAAACTGTCTAACATCTAAGGTAGGTCATCTCAGAGAAAACCAGTGTGATTTTTCCCCTCCCTCCTAAAATGTGACTTGTTTGGACCCTTAAAGGAGAGGCTTAAGGCTGATACATATCGAAGCACATTTATAACGTGTCCCCAGCTGGCATTGAACGGAAGTGACCTGAGGTTGAATTTTCATTCCAAAGAGCACTGGTGTGGCTTCCCCTAGAATGACCAGTTTCCATGTAAACGGAACCTTTGGGACTGCTCCCATCCCAGTACATCCACAGTATTTTCCCAGGTTTTGGATAAACTTGTAATTGGACTTAGAGTATTGAGGCAGCTCCCGAAGACTTTGTGAGGCTCCCATCTGGGAGTGGTTCAGGGCCCAGAGTGCTGTGCAAGGGTCGTCACACTGCAGAGTGCACCGCTGAGTGCAGGGTGGGGCCAGATGCCCACTGAGGGCAGGCAGCCTGCATCGCCCCTTTGCTCTCAGGCCGAGCCCAGGCGTGACCTGCGGAGGTGAGAAGTCTCTATACAGGTGGTGTGTTTATGCACCTACAAGTATAATCTACAGAAATGGATGTGGTGGCATCTTCATACTAGACTTGTCATGTCTCATCTGTGAGTAGATCGGCTGCTTGGGTTTCTGCCTAAAGCGGGGAGCTGTCCAAGCTCTTTGGCGTGGCAGCCCCATGGTTGAGGGGCAGAGAGGCGGCCCTGTGTTTGCTGCTTTTAGGTGTTGTTTTTTTTTTTCCCCACTATGGCAACTGCAGTGGACTTGATTGGGTGATGATGTCTGCTTACCTGGAAGTGTCCACCCAAGGAAAAGGCACTCGTCTGATGACACCCTCTCTGCTCTGTCTCCGTGCATATTTTACAGTTTTGGTCCTGGAGATCAGGTTGTGTGAGGTCTCTGTGTACTAAGGAAAAGTTTTAGCATACCAAGAGATTTTTCATTTTAATCAGTTTCCTCCCCCTTTATATCACTTTTTATGACAAAAAGGAAAGTGTTCTGTCCTGAATTTTTCTTATTTCCCATCAATTTATGTGGACAGCAGTATGGCAATTGACACCTTAGTGAAGCCAACTAAGCAGCTCATTTTTGCCTTCTTGGCACGAAATTTGGAAAAAAGTTAAAATGAGGTGTTGAAAGTGGGAGGGATTTAACATTTCAATAAATTGAACATACCAAAACAGAACACTGTAATTTGCCTTCTGACTTGTTCATTGTGCTTTGGTACCTGCTGTGATGAGAGAGTACTGCGTGCAGGAAATACTTCATAGCTGAGTGCTGAGGAGAGTTTCTACATTTTTTTAAATCCTCAAATGTGCAAAACTAAAAAGGAATTCTCCTTTTCAGCTTATTTTAATTTGTGCAGCCGATGGTTTTGTTCTTATCTTTCATGGAGTGTTGACGGTCTCTTTGTAGATGGTGGTGAAATGTTGAGTGTTTAGAATATCCTAGAAATAGCTGCCTGAATAGAAGTCCTCTATTAATCTAGAACACTAGAAGAAAAATTTAGAAAAGTCTCTCAAAAGCCTTCTAAGAGAACAGAACTGGAGTCTGAATATTTGCAGTGTGGAACTCCTGCCCTGTCTTACCATGTGAGTGAAAGAAGTTGTTTCCTTTGCAATTTCCTGTCGCAAGATATGGGAGAGAAAATAGTTTTATTGGTATCACTCAATTTAGTAACATCTAGATGTCGCCACTGACCTCATAGTCTTCCATAGTGTCATTTGTAGGTAAAAGTTCCAGTGTATTGTTTTCTTGACCTTCTGTTTTAAAGGTTAAACTTTACATATTTAAGTGTGAGTTTAGGGTGGTGTTTTCCAGGTTTCCTCAGATTGATACTGTTGGCAGAATCCCATATTACCTTGCAGAATAGGGTCCCCCCTCCCCGACCCCCACCCCAGTGCAGTGGTAATGATTGAAAGAAATCTTCAGAACATAAAGCAGCCAAACACTGTCAAACTGGAATTGGCCACCGTGGAAATCAGTCACCCAGTTTTTCGTTGATTCAGAGACATTTGTTCTAGTGGGGGCCGGGTGGTGGTCAGAGGGTTGAGGGAAGCAGGAGACTGAAGTGAGCCTCCTCAGGCAGAGGCTTTCCCTTTTGCCACCTTCAGGATTTTTTGTTAATTGTTGTGTCCAGATAGCTGTTGTGTTTTAAAATATAAAGAAAGAAGACTGAAATTGTAAATACTTTGTAAACATAATCATTTGTACTTGAATAGTAGGGTTTTAAAGGGCACTGATATCCCACCAAACAAAAGGTATAATAAATTGACCTTTTTATATGCTTGTTTGTTTTGTCTTTCATAGAAAA EMBV3_36849 GGAGTTGAAGAGAAGGAAGTCATATTTGCTATAAAGAGGAAAGACGAAGGAATACTTCTG Gene BVT0102_328296 + 0 NULL GK000024.2:26133415-26283414 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141985 1 XLOC_086412 NonCoding TCONS_00141985 XLOC_086412 NonCoding NonCoding - 24:26198589-26198947 - TSS106196 358 1 TCONS_00141985_1 38 0.301675977653631 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.37755857905805e-05 0 0.00322397246442853 0 0 0 2.07281305033159e-05 0 0 0 0 0 0 0 0 0 noncoding CTCTTAAATGGTGATAATAGTACCTACATCATATATGAAATAGATTATGACAAGGATTAAATAAAATACAGTATTTAAGGCCTCAAACATGACATATCATAGACACTCAAGAAAATTGTTCTCAAATAATTTTTAAATTATTTCTCACAGCCAAATAGAAATTCTAGATATCATTTGCCCATGAAACCATCAGTGTGTTACTTTGATAAGGATTTTGGAGTTGAAGAGAAGGAAGTCATATTTGCTATAAAGAGGAAAGACAAAGGAATACTTCTGGAGTATGAAGCTGTAATTTAGAAGAGCATAAACAGAAACCAAAACACAGTAAAGATTAAGATTTTAAACAACACAGGGACTT TCONS_00139967 . 5' 65176 TCONS_00139967 . 5' 65176 EMBV3_35489 TCTCCCTAGGCCCAGGGGCCTCTCCCAAGAGCCCCAGGCCCGGGTGTGGACTTCATTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10092 GAGATCGTCCTGCCCAGATGCAGCAGAAACCATCCAAGCGAAGAGTGAGGTTCCAAGAAA Gene GeneID:541076|CNST:NM_001105256:95_cdna Constitutive 0 NULL GeneID:541076 16 GENE CNST MGC179456 consortin, connexin sorting protein EMBV3_11200 ACAAGATCCTCGTTTCCAACTCGTGCCTTTCCCCTTTTTAGAAGCAATGAAAGCTGCTCC Gene GeneID:529761|TMED10:NM_001040549:142_cdna Constitutive 0 NULL GeneID:529761 10 GENE TMED10 TMP21 transmembrane emp24-like trafficking protein 10 (yeast) EMBV3_33852 CTGCGCCCGGCGGCGCCGGAGCCCGGGCCGATGGTATGGTGTATGCACTGGGGGGAATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19549 ATTAGCTGCTTTGTGTTCAGAATGGTAGCAATTGCTTTGTATATTAAAGTAATCCTTGTG Gene BVV0102_428617 + 0 NULL GK000002.2:96328762-96340575 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103101 TCONS_00103106 TCONS_00103098 TCONS_00103105 TCONS_00103108 TCONS_00103109 TCONS_00103104 TCONS_00103100 TCONS_00103099 1 XLOC_062015 Coding TCONS_00103101 XLOC_062015 Coding Coding CREB1 2:96278300-96334938 j TSS76629 7411 1 TCONS_00103101_4 341 9 0.869308049508272 0.000228645430903657 2.98980687383728e-05 7.17255339594494e-05 9.34292783283183e-44 3.99722648230011e-14 7.22277253192406e-50 2.26673790681207e-05 2.38406249331167e-05 1.22201467984846e-12 1.51678799834892e-08 3.29796804786837e-10 3.75931624824007e-05 3.60319219581343e-06 3.56212160235405e-13 3.79804318280259e-12 1.34247171707849e-07 3.34786516036455e-08 0.000745650913521812 1.3818177916888e-12 6.26399647829081e-05 1.04956197344293e-10 6.56756435713236e-13 0.000590531773815019 0.00191635272550678 6.08926291905649e-05 4.32346138309715e-06 3.12462017579275e-09 2.62146843456092e-05 4.48429797539292e-12 1.12230270673688e-52 NM_174285.1 CREB1 Bos taurus cAMP responsive element binding protein 1 (CREB1), mRNA. 0.0 1829 95.78 0.150047227094859 NM_134442.3 CREB1 Homo sapiens cAMP responsive element binding protein 1 (CREB1), 0.0 4693 81.96 0.636621238699231 TCONS_00103101_4 sp|P16220|CREB1_HUMAN CREB1_HUMAN Cyclic AMP-responsive element-binding protein 1; 0.0 686 99.71 0.997067448680352 3 coding 0 0 0 0 0.0130909949667155 0.959873627457596 0.0211252888806043 0.700013123691621 CTGCGCACTCGGCACTGGGCGGCGCTGGCTGGCTCCCTGGCTGCGAGTCCTCAGTCGGCGGCGGCTGCTGCTGCCTGTGGCCCGGGCGGCTGGGAGAAGCGGAGTGTTGGTAACTAAATGACCATGGAATCTGGAGCAGAGAACCAGCAGAGTGGAGATGCAGCTGTAACAGAAGCTGAAAGCCAGCAAATGACAGTTCAAGCCCAGCCACAGATTGCCACATTAGCCCAGGTATCTATGCCAGCAGCTCACGCAACATCATCTGCTCCCACCGTAACTTTAGTACAGCTGCCCAATGGGCAGACAGTTCAAGTCCATGGAGTTATTCAGGCGGCCCAGCCATCAGTTATTCAGTCTCCACAAGTCCAGACAGTTCAGTCTTCCTGTAAGGACTTAAAAAGACTTTTCTCCGGAACTCAGATTTCAACTATTGCAGAAAGTGAAGATTCACAGGAGTCAGTGGATAGTGTAACCGATTCCCAAAAACGAAGAGAGATTCTTTCAAGGAGGCCTTCCTACAGGAAAATTTTGAATGACTTATCTTCTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAGAAATCTGAAGAGGAGACTTCAGCACCTGCCATCACCACTGTCACGGTGCCAACTCCGATTTATCAGACTAGCAGTGGACAGTATATTGCCATTACCCAAGGAGGAGCAATACAACTGGCTAACAATGGTACTGATGGGGTACAGGGCCTGCAGACATTAACCATGACCAATGCAGCTGCCACTCAGCCAGGTACTACCATCCTGCAGTATGCACAGACCACTGATGGACAGCAAATCCTAGTGCCCAGCAACCAAGTTGTTGTTCAAGCTGCCTCTGGAGATGTACAGACATACCAGATTCGCACAGCGCCCACTAGCACCATTGCCCCTGGAGTTGTTATGGCGTCTTCCCCAGCACTTCCTACACAGCCTGCTGAAGAAGCGGCGCGAAAGAGAGAGGTTCGCCTCATGAAGAACAGGGAAGCAGCACGAGAGTGTCGTAGAAAGAAGAAAGAATATGTGAAATGTCTAGAAAACAGAGTGGCAGTGCTTGAAAATCAAAACAAGACACTGATTGAGGAGCTAAAAGCACTTAAGGACCTTTACTGCCACAAATCAGATTAATTTGGGATTTCAATTTTCACCTATGATGGTGGGAAAAGGACTGGCTTGGCCACAACCAGAAAGACAAAATAAACATTTTATTTTCTAAACATTTCTTTTTTTCTATGCGCAAAACTGCCTGAAAGCAACTACAGAATTTCATTCATTTGTGCTTTTGCATTAAACTGTGAATGCTCCAACACCTGCCTCCACTTCTCCCCTCAAGAAATTTTCAGCACCAGGAATCATGAAGAGACTTCTGCTTTGTATCCCCTGCCCTCTTCAAGAAGTAATAATTTGTTTACTTGTAAATTGATGGGGGAAATGAGGAAAAGAAAATCTTTTTTTAAATGATGTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCTCCTTGAGTTGACGTAATGTTTGGGCCGCATGCTTAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTTTCACATTTCCATTGTGAATTATGTAAAATCGTTGAAGAGACATACCCTGTGAGAAAAGAATTTTAGGATGGTGTTGAAGAAATTAAGAATGAATTCAGAGTGCTTTCTATGTATATTCTCTTCAATACTGAACACTTGTCCTTGGTTCTTAAAAATATTCTGTATTAACTATAGCTCTTCAATAGGGCAGTTGTTGCTTCTTAATTCAGTTCTGTATGTGTTCAACATTTTTGAATACATTAAAAGAAGTAACCAACTGAATGAAAAAGCATGGTATTTGATTTTAAATTAAATCAAAGTAAGTAAAATTACAAAGCTTCATTTAGTTTAGTACTAAATTTTTAGTACAAAGATGCTCATTAGTAAACCAGTTCCTTGAGTTATATAACAAGGTTTTTAAATAAATGTTTTTGTCATCACCTTCAAAAATATTTATATTGTCACACATTTACTTTAAAAGGTTTTTCTAATTAAACTGCTCCTCTTTGCACTTATACCACCAACAGGAAAGCCTTCAAGATGTTGAAGCAAAGTGATATATTTGTTTATAAAATGTTATGTGTTGTAGAAAAATGCTGATTTTAAATTGTTTCCATATTAACATACTTTAACAGTTTAGTGAATTTTTTAATGAAAAAAGTTATAAGGATATAGTTTAAAAGTACAATATTAGATATACACAAGGAAAATATTTTCTTCAGACTTATTTGAATGACTGCTGTACTACGATATTTGAATTGTCATTCTTGCAAGACCTTTTTTTGTTGTTTTCTTCCAAAAGGGATAGGGATGCTTAGCTTTCCAGTATGCTGTATATCCTTTGTTATTCTGTGAAGGAGCTACCTGTTTTACCTGACTAGAACCGTCTGTATGTATCACACATTGTTTCCAATATGACTTTTAATTACTAATACTCATTTTATTCACTAAGTTGATAAATTTAAAAGTTGCCCTTTAAAAAAATAAGACTGAGATAGATCTGAAAAATTTGAAATTGACATAATGTTAAATTATAATTTCTCATTTGAAAAGGTGTTCTTTTTTTTAAGAGTCTAGGATTTAATGTTTTATATTTAGTTATGTCATGGGTTGTTTTTAAGTTTGTTAATGTGTTAACAAAATATGCAGATGTGGGTGTTAATTATTGAGTCCATTTTGAAAAGTAAGACTTTTAATTAATATTTGTAAATGGTATTATTTTTTGTTTGTAACAAACCATTGTCTTTTTTTAAGGATGAACAGAGTTTATGAAGCCAGCATCATTCTAAGAATTGAGTGATGTAGTCTTATCTTTGGACAGTTCACCAGATTCTCAAGAAGGCTTTCAAACGACTGTAAATTTTGTTGTTTATCCTGCTGAGCTAACGGTGAAAGTTGTAGCATAAAAATTATTTGTATGCCAGCATAGATATACCATTTTCCAAAACTGGTTTGATAGAAACCAAGCAAAATCACAAATCTGTTTGCAAACCAGAATTTTTAAATGAGTCAGAATGTCAAAACTGAACATTTTAAAAGTCATAAGCTTTAGAAATGAAAATTGCTTAATATTTAGCAAATTAAATGTTTTCAGAAATCAAGGCTGTTTAATTAGCAAGTTGGTGGTCTCTTAGTCCCTGATAAATCAAGGCAATCACATCCATATTAGCTGGTTGGATTTATAAGTTACTTTGAGGATGACTGCTCTGGTTTGAAGTCAGTTAATGGTGAGGTAAGAAGTATATTCTGTTGCTAAATCTGTTTAGACCTTGGAGAGACTTGAAGATTTTCGTTTATACAGATAGAAATTAAGCATCTTTTGTGAAGACTTTTTTTTTTTTAAGAGAATTGGGAAAAATGTGTTTGTTTTTAAGCATGCAACTTTGAGAATCTTTGTTAACAACGTAATTTTTAAAAATCTTACAGCCAAGAATATATGTGGCCACATTATAAATGTTTTTTGTCTTCATATTGGCCAAAAGGGAATAAAACTGTCATCATAGGAATCTGTACATATGCTACTGATTTGCCTAGAAAATAGCAAGTTTGGTATTGCTCACTTTGCAAATATAGGGCCATGTGGCACTTTTATCTATAGGACAGATTAATTCTAATAAAAATGAAGTGGGAGGGGTTTATTTTTGATATATTGCTCTTATGAGTTTTTAGGCTTTGATAGTGTTTAACTGAAAAGTGGTTTAGAAAGGGCTAGATCCAATGTGTTCACATTATTAAACAGAATTGATACCAGGTGTAATTTTTAAGTTCATTCTTTTTCAAACTCAAGTACCATATTGGCAACCATAATATTGTCATAGGTGCTCTATTCATTTAGATATTCTTGGGGGGATGGCATTTGTATAATACATGTGTACATATATATATACATACAGTATATATCTGAGGCTCTGAGAGCTCTTAAGTCAGGAATGCTAAGTATTATAGTATATTGAGGTCAGATGAAATTTTACATTTTTGCGTGATCTATTGCATCCCTTTTGGTAGTTTCTTGGACTGCATTACTCCAGCACTCATGATGGATTTTTTTATCTGCTAATTTCCTTTTTTTTTAATTGTTAATTTTATTTGACTTGATACTTTTAAACATGTTACTAGTCACTTGAACCACCACCACAACCACCACCACCCCCAAAAGTATTTGGTTTTTATGCTTTGTCTCTGGCAGCTATAACAGTGGTGAGAACATTTTGAAGATAGCTTCTAAAAGGTACCACTGATTTTTTCAAAAATCATCCTGGGGGAAAATTTTTGGTGTTTTCATTTGAGCAGGGATTTTTGTCAGAAAATACACTTAGATGGTAAGTCAGCAGCAGTGCTAGTATCTGAAAGCACAATACCAGTCAGGCAGGCTGTCCGATCAGAAGTCATCTGGCTGAGGTTTATCTCTGTCTCTCAGGCCTAATCCCTGATCCTTTTGACCATTTAGGGTGACATGTGGAATCATACAAAGGCTTATTAGGAAGATACAAGTTTGTTTAAACCAGGATGCTTTTACTTACTTTAAGTGACTTCAATCTAGATTTCTTATTTTCATTTCTAATATTTTTAATTCTGTGATCAGCTTTAGTCAGCTGTCAGCATAAATTGGTCTCTTTATTTTGAAGATCAGAAGGTTGGCTGCTTCATTTTTCAGGATTAAATAAGGCTGACATCTTAAAGTTAAAATTTTGAATTAAAGTAGGTTCCAAAGACACTTGTTACACACCATTTCATTTTTTTCAAGAGGCTCTATTTGTTGCCTTTGTAACCCTGAAAACTGTGGGTATATTGTTTCCCATTGACTTAATACAAAAGTTGTATATTTATTTGGATTATATTTACGTTATATTCTTTGTAAATGTTTGGTGTAACTTGCACTTTTAAAACGACCCTGTTTGGGGTATTAGCAAACTTGAGAAATTCCCTCATCAATTGTCATCTGACTTTTTATGTCTTTCTCCTCTCTTCAAATCATGTGTCTTTTTTATGGAAGCTTTTCATTGATTAAAATATTTTATTTAACACCTAAATGCTAGCCTTATAAATAGCTGTAAAAAGAGGAAAATAAGGAAATTAGACTAGCTCAATTAATTTAAAAATGGGTTCAAACCCTATCTAATTCTCTTTCATCATGAATAAAGATAGTAGGAAATACAACTCAAGTGAATAAATACTTATTTCCAATTTTAAATGAGATTCTGTCCTCACCCCAACAATACTATCTATAGGATCCTAAGATATCCTTGAATTTGTGCAGAACAGTGAAAGACTTCAAGGTAATTAATTATTGTTGTCATGGAGAACACGTAATAATTTGATTAACTTTTTCACTTTAAATTGTCTTTGTTAACATAAAAAATAACTGTCTAAATTTGACTGGTTTCAGATGAGAGGAAAAGTGAGGTGTGCTTATAGTAAGCCTATAGGTGAAGAATTGTGGGATAAATTTGTTCACTCAGTTGTACAAAGCACAACTAGAACTTTTTGTTGGATGGCTTACATACATCTTGAATACTTTTAATGTTGATGTGTTGACTTTTTTTAAGTTGACTGCACAGTCACTGTTTGTACTAGGAACTGGTTTCCTTGACTGTCTAGAATCAACGGCTGAGAGAGGCACTAATCCCTGAGGGGTTGAACATATCATGGAGCTGAGTCAGTATGGAAGAATTTCAAATCAATCAAACAGGGTGCTGCAGTTCCATCTGTCTCATCTGCTGATGATAAGTTCTTATTGATGAGTGAATGTAGCTTAAGCCTTTGTATGTGTCCTCAGGGGGCAGACAAACTTTAAGAGGGACCAGATAACATTTGAATGGAGGAATTATATTTCAGGTGTTTTAGCTTGAAATTTATTTTTTAAAAAAATAAAAATAGAAAAAAAAAAAAGAAAGAACAAAGCCTGTGAAGCAATTTGATACTATAAACAGGCTGAGTTGTTTAGCACAGAGAGAAAATATTGACCTGTCTGCATTCTGGTACTGTACATACAGGTCCTAGTTGGGTAAAACACGATACATTTTGAGTTATTCTCACCAGCAAGTAAAAGTAAAGTGAATATTCTTCAGTAAGTGTCTTTTGAAAGGGTCAAACTATAGGAAATGCAAATTTTACCTGCTTTATACAGGCATTATTTAATACTTGCCTATAGAAGTATGGCATTTCTAAGCTGGTGTCTGAGGAGCATCTCAGATGTGAGAGTAAATCTAACATAGTTCAAAAATTGGTAAGGGAGGAAGAAAATCCCTGCAGATGATGACCTTAGTCAGCTGGCCAAGTGAAACGATCTGTCATTGTGTTTGGGAGGTTTTATTTTCTTACGTTTTTAAAATTGAATTGGTATATGCTTTATAGACATTGTATTTTTATCCAGGTGCCACTCCAATCTGTGTATGTAATAAAATTATTTATATTAAAATTGGGAAATAATCCGTGAGTATAGATGAGGATGGCAGAGAAGAGTGCTCGTTCGCAGTTTTCCATGTAAAGTCCCTGACTAGTTTGTCATGTCAGTTGTCATCCCCACCCAAAAAAGGAATTATTTCTAACCTAGCTGTATCACTTGAAACTTTAGAAACAAAGTAATCAGGGAAGTTTCTAGAGAGAAAGGTGTCAGGTTTTTGGTTTTGTTTTGTTTTTCCTTGAGGATTGGGGTCAAGAATACCTCCCCCCAAAACTGTCAGCACAAAACAGGGTATTGACTTTTAACTCTGATGTTGCTATTGGAGTTGAATACTAAATAAGTAACTATAGTGAGGAAAATACATTTCTAATAAAATTCCCTACATTCTAGAAGCATCCCTGTTTTAATTTTTTTTTTTTTTTACCTAAATCTTTTTGTGCTTTGTGTAAAAAGAAAAAATGTACTGAGTTATAATGCATTTTATTAACACTATGTACATATTAGCTGCTTTGTGTTCAGAATGGTAGCAATTGCTTTGTATATTAAAGTAATCCTTGTGAATTTGTGAAATATTGTCATAAAGTGCTTTTTCTTACTGTAATCTTTGTGGTATCAACTGTCATAATGCCCTTTTTACACAAACATTTATGTGCTGTCACATAAACATGCTTTTAAAAACTCTCTAAGTCTCTCTTTTTGGGATGGGATCATCTACATTGTGGTTTTCCTAGGTGTGTTAAGCAATATTTTGTGGACTTGGTTTATTTTGTTAAATGGCAAAAGTTATGCTAGAATATATCACAAGCTTATGTTGCACAGCAGCAGAAAACTAACTCAAACAACATATCTTTACTTAATTTTACTGTATTCCTGGTTTTTAGCACAATATTTCTTTTTTCAGCAAAATTAATGA EMBV3_43601 CACAGCTGTTTAAAACTTTGTGTTAGAAAACTTTAGATACTTCCTTTTGCCTCAGAATAT Gene BVT0102_055732 + 0 NULL GK000030.2:74328493-74435870 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244724 TCONS_00244726 TCONS_00244725 TCONS_00244720 TCONS_00244729 TCONS_00244723 TCONS_00244728 TCONS_00244731 TCONS_00244730 TCONS_00244727 1 XLOC_150535 Coding TCONS_00244723 XLOC_150535 Coding Coding CHM X:74152222-74401777 = TSS183863 5218 1 TCONS_00244723_5 653 15 0.979150805036185 4.3756262509106e-06 0.000167253114585144 0.000218202250704337 0.000233649183957818 8.61010197519249e-11 1.20726590104349e-07 0.000234439617892832 0.000124596681762688 0.000516017477770021 7.42171697235933e-08 2.86532230839275e-22 2.43424253607596e-11 1.25419504165224e-08 1.16866257468251e-17 8.25957685474423e-05 0.000450313792731281 4.80633703151817e-08 0.000714875125967721 1.19071917698241e-06 0.000574030033330746 7.8082626393582e-06 7.07052234229716e-09 6.09181424079763e-05 9.66539706163942e-07 0.0002597724929729 0.000125331067713533 3.00986698075216e-29 1.02904987909681e-12 5.6525127199657e-11 1.16259129652649e-11 NM_001205389.1 CHM Bos taurus choroideremia (Rab escort protein 1) (CHM), mRNA. 0.0 9411 100.00 0.999808355691836 NM_000390.2 CHM Homo sapiens choroideremia (Rab escort protein 1) (CHM), transcript 0.0 3375 82.95 0.625527021847451 TCONS_00244723_5 sp|P24386|RAE1_HUMAN RAE1_HUMAN Rab proteins geranylgeranyltransferase component A 1; 0.0 1204 88.21 0.998468606431853 1 coding 0 0 0 0 0.451726840091089 0.32782988200748 0.144951779387527 0.0637931884593065 AACAGTCACATGACACGTTTCCTGTCAAGATGGCGGATAATCTCCCTTCGGAGTTTGATGTGATCGTAATAGGGACGGGTTTGCCTGAATCCATCATTGCAGCTGCATGTTCAAGAAGTGGCCAGAGGGTTCTGCATGTTGATTCAAGAAGCTACTATGGAGGAAACTGGGCCAGTTTTAGCTTTTCAGGTCTGTTGTCCTGGCTAAAGGAACACCAGGAAAACAGTGATATTGTGAATGAATGTCCAGCATGGCAAGAGAAGATCCATGAAAATGAAGAAGCTATTGCTCTTAGCAGGACAGACAAAACCATTCAACATGTGGAAGTGTTTTGTTATGCATGTCAGGATTTGCATGAAGATGTCGAAGAAGCTGGTGCACTACAGAAAAATCACGCTTCTGTGACATCTGTGAACTGCACCGAAGCTGCAGATTCTGCCTGCCTGCCTGTAGAAGATGAGTCATTAAGAACTACAAGCTGTGAAATACCGGCAGAACAAACTCCAAGCAGTGATCCAGAGAGAGCCCTAGAAGTAAATGATGTTCAAGTGACAGGGGAAAAAGAAAACTGTTGTGATGATAACACTTGTGTGCCCTCAACTGCAGAAAAGGAAACAAGTGAAAATGTACCTGTGGCCGAAGACACAGCAGAACAGCCAAAGAAAAATCGGATTACTTACTCTCAAATCATTAAAGAAGGCAGGAGGTTTAATATCGATTTGGTATCAAAGCTATTGTATTCTCGAGGATTGCTGATTGATCTTCTAATCAAATCTAATGTTAGTCGATATGCAGAGTTCAAAAATATTACCAGGATTCTTGCATTTCGAGAAGGAAGAGTGAAACAGGTTCCTTGCTCCAGAGCAGATGTCTTTAATAGCAAACAACTTACTATGGTAGAAAAGCGAATGCTAATGAAGTTTCTCACATTTTGTATGGAGTATGAGGAACATCCTGATGAATATAAAGCCTATGAGGAAATTACATTTTCTGAATATTTAAAAACTCAAAAATTAACCCCCAACCTCCAATATTTTGTTCTGCACTCAATGGCAATGACATCAGAGACAGGCAGCAGTACCATAGATGGTCTCAAAGCTACTAAGAACTTTCTTCACTCTCTTGGGCGATATGGCAACACTCCATTTTTATTTCCTTTATATGGTCAAGGAGAACTCCCTCAGTGTTTCTGCAGAATGTGTGCAGTGTTTGGTGGAATCTATTGTCTTCGCCATTCAGTACAGTGCCTTGTTGTGGATAAAGAATCTGGAAAATGTAAAGCAATCATAGATCAGTATGGTCAGAGAATAATCTCTAAGCATTTCCTTGTGGAAGACAGTTATTTGTCTGAGAACACATGTGCACATGTGCAATACAGGCAGATCTCCAGGGCAATCTTGATTACAGATAGATCTGTTCTCAAAACAGATTCAGATCAACAGATTTCCATTTTAACAGTGCCAGCAGAGGAACCAGGAACTTTTGCTGTTCGAGTCATTGAGTTATGTTCATCAACAATGACATGCATGAAAGGCTCATATTTGGTTCATTTGACTTGTACATCTTCTAAAACAGCAAGAGAAGATTTAGAACCAGTTGTGCAGAAATTGTTTACTCCATATACCGAAACGGAGATAGAAAATGAAGAAATTGAAAAGCCAAGACTTCTATGGGGTCTTTACTTCAATATGAGAGATTCTTCAGATGTCAACAGGAACACTTATAATGATTTACCATCAAATGTTTATGTCTGCTCTGGCCCAGACTGTGCTTTAGGAAATGATAATGCAGTCAAACAGGCTGAAGCACTTTTCCAACAAATCTGCCCCAACGAAGACTTCTGTCCTCCCCCACCGAATCCTGAAGACATTATCCTTGATGGAGACAGTTTACAACCAGAGGCTTCAGAATCCAGTGCCTTACCAGAGGCCAGCTCAGAGACTCCCAAAGAAAGCTCAAATCTGAGAAACCCAGAGGAGCCCTCTAAATAATGAGTATATACCAAACTGGATACCACGCTGTGGAAAATCCTCCTAGCCTGAGAGTCTTCTTGATGGAAGAACTGTTTGAAAAATGTTACAAAACAGCAGCCAGTTAACATGCAGAATTACCAGTAAAAACAATAAAAGATATCCAAAAGGGGATTTTCCTTAAAGAGGACATTCTAAGACCACAAAACACGTTGTAAAGCACATTGACTTGCCTGCTTTAAGATACCAAACCTGTGGAATTAGCAGATAAAAATTATAAAGTGGATTGATTCCCAAAAATACAGCTATGTTAATGAAAGTAATCCTATGCATTATTAATAATTCCGTGGTATTAGGACAGTTCTGCCTGCCACTTTGCTTGAAAGCCACATATTTGGAATTGGCTCCCAAATTTCCTTTGATTATTTGAGTTATATTTTCTTTATGGGTGTGAGCATCGTGACACAAATGATGAAAGTATATGTAGATATAGTTGAAAAAAATTAAAGTGTCATAATCCAAGAAGGAGCCTGTGTTTGAAATAGAGGTTTGTTTTGTTCTCTATCTTGAGGAGAATTGAAGATACTATATTAAAGTAGACACTTTTACAAACAAGTCATGAGTCCCTTACTCAGTGTTTTTGTTTTTTTTTTTAATGTTAATAGTATTTGTATTTGAGTCCTGAACATTCTACGAAGCTTAGTACTAGAGAAATGAAAGGAAAGATTTGAATAGGCTCCTTTGGTGTTTGGAAATTCTTTCTAGTTGAGCACCATTTCATCCTAGCTATGCTGATATTAGGCAAATATGATGATATTTGCAAATTGCCTAATATGATGATATTAGGCAAATTGTGTACTTTCTGCAGCTCAGTTTCTCCACATGAGTACTGTATAAGAATTATTTTGAAGATATATGCAGTGCTATCCTTAGAATTATTTTTCTGGAATAAAAATTCTTTCAGAATTTTCTCATTGACTTGGGGGTGAATATCAGATCTCATGCAGCAAATAATTGTTTGCTGTCACTTCCCCCAACACAATAAATCACAGTGTTTTTATTGCATTAAGCTTTTAAAATCAAAATCTATTTCTTAAATTAGTATTTAATATTCTTATAGAAAAGTAAACAAAGTAACATATAGAATTATGGTTTTAAATCTTAATAAGGAAAACACTCTATAAACTCTTCATATTCCTTTTCTAGTAATTAGACCTGAAACCACCAATGACTCTAAACAGAATATGACAATTGATAAACCCTAATATGCACTTAACATAAAAATATAAGGGCTGTGAATAGACAGCAAATCTAGGTACAGTGAGTGCCTGTATTAAAATCTTTCCAAATGCTGAGCTCTGATGATTTCCCTTCTTTGAGCAATAGTTTGGACTTAACAACTTATTTGAATAAATAAATTCATTGAAAGTGTATTGTCATGCTGTCTGGCCTGTATTGCTGATCAGAGAGCCATGGCTACAGTAGAAAGCACATAGTTCTTACATTCTTCAGCTGTAGCAGGGCTTTGACCTCTCCAGATTTCAGCCGGCTCTTTAAGGTCACAGACTCATGAGAAATGGAAAGAATGTAGCTCTTGCCTCAACTTTTAACCCCCCAGCAGGGTTTAAAGTCAGCAGATATAGCTGAATCCAGAGGAAAATCTTCCAAGCCTCTCAGGCTACTTCTAACCCCTCTCCCCATTGCACAGCCTTTACCCTATCTCTTTAATCCCCTCTATCCCTCTCTTCCCTTTTTATAATGTTATACAAATCAGGGACAATAGAATTACATTATAACCTACTTTGTTATGTGGATTCAGATCTGTCTTAAATTATATTTCCTGAAACCCAACTATGGCATGTGCTAAATGCACAATATACACCTATAAGCACTGGGTATTGGTCCTGCCCTGCAGTACCAGCAATATAAAAGGTTCCACTATATGAGAGCATTGAGTTTGAATACAAATGCAGTAAGCTGTACCAATTAAAATATTGTACTTTGTTATAGTCTTATACTTTGTTATAGTCTTAGAGTTAAGGCCTCTTGATATATCATGCACACTTAAGTAAACAGCCAATCAGGGTAGACCCAGAATAACTAGAAAAATTCTGATAGCTTTACTATAGTTCTCTGAACAATGAAGGATACTCTGTGGTCTTGTGGCCCAATCTATACTGTACCCTTTTTCATCCATTAGCCAGTATCAGAATTTCTCTTCTGGATTATTTATTAATACTGTTGAAATGTTTAAAAGCTCCTGAATATCATTAGTTATGATTAAGATAATACACAGCTGTTTAAAACTTTGTGTTAGAAAACTTTAGATACTTCCTTTTGCCTCAGAATATAATAGAAATTATTCTAAAAACATTATTTTCAGCTGTCTTACTGAAAATACTTGTTTTCATAGCTTTAAAGAAAAGCCTTTCGGTTTTATTGTAAAACCATAAGCATGAAGTCATATGAATAAAATTTAGATGTTTGTACATGATGCGGAAATTTCATTTGCTAATTTTAAATTTTGAAAATTGCTGTTATCAAAGAATTGTTATTCCTGTGTTTAAAATGTTTGTGTTATGCATGCTTCTTATTAGCCAAAAGTGATAATACCATTCAGTTCAGTCATCAATATGAAAACAGATTACTAACCCTATGTTGCTACTGTATTTTTGTCTAGTTGGTATGCCTGCCCAGAAAAAAAAAATAAAAATTAAAAAAATATATATATATATAATAAACATATATTTTTCTACAGGAAAACTGAGTTATAATTTTCCCATCTGCTATTATACTTAGCTGCTTATAGAAAAATGGTCATGTTAATGGTTAACTTTTGGAATAGTAATTTCTGAGATTGGCAGCCCTCTGCCCAAAATAATGAGCATGCTAATTATTAACTTCTGTCACAGCTATAGTTCTGGAGAAAGCAAAGTATGTCTAAAGTCCTAAAAACCTCAAAAAAAATTTTTTGTTGAAATTTTATTGCTAAATAGTAATGATACTTTAAAGCAATTTTCTTACAGATAAGTATTTACTCCCATTAGGATAATTTCTCTCAACTTCTGATTGATTTTCTTAAGTGCATTTCAGAAAGCATGAATATATGGTTATTAGTAATTTGCACACTGTAACAGTAAGTTTTCAGAGGAAATAGTCTGTTTTAACACCTTTCAGGTGTGGTATCCTATTTTTTAATATTAAAATTTTGTATATATGCCAAGAAATTAAAAATTGTCCTGAAAATG EMBV3_41572 GGAACGGGCGTAAATACCCTACTGCCCTAAGTATAAAGCAGACGACTAACGAGAACCCAC Gene BVT0102_186946 - 0 NULL GK000026.2:7477858-8523898 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05096 CCTGGAACACTCAGCATTTTCCCTGGCTCTTCCTGCCCAGAACCTCTGAATGGAGAAGTA Gene GeneID:513110|SLC38A7:NM_001100355:216_cdna Constitutive 0 NULL GeneID:513110 18 GENE SLC38A7 NULL solute carrier family 38, member 7 EMBV3_43615 TGGGCTATAACACGGCCCACGTTTATGGGACGGACCTTGCAGTTAAGTGTGTGTCATCTG Gene GeneID:505722|TCEA1:NM_001045925:20_cdna Constitutive 0 NULL GeneID:505722 14 GENE TCEA1 MGC137551 transcription elongation factor A (SII), 1 EMBV3_01304 GGTTTAGAGGAGCAGGATGTATCGTGTGAGGGTATCACATTCCCAACCCAGAGATCATTT Variant GeneID:537103|ZNF175:XM_002695231:2_cdna 296^422 3 EMBV3_28134 GeneID:537103 18 GENE ZNF175 NULL zinc finger protein 175 EMBV3_25668 CCCCTGGCCTTGAAGATCGCTGGGCGGATTGCTGAATTCTTCCCTGATGCAGTACTTATT Gene GeneID:509858|LOC509858:XM_002690497:458_cdna Constitutive 1 NULL GeneID:509858 10 GENE LOC509858 NULL similar to UPF0172 protein C14orf122 EMBV3_27566 GGGGCGAGGCAGGGCCAGCAGCAGGCGGGAGGAGACGGCAAAACAGAACAGAAAGGCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37160 CCGTGACTCCCAGGCCAGATGAACGGCTGTTTGATTTAGAGAAACCCACACCCTTTGTGT Gene GeneID:530744|CCNK:XM_002696834:647_cdna Constitutive 0 NULL GeneID:530744 21 GENE CCNK NULL cyclin K EMBV3_38895 GAAAATAAAGAAGATTTGTCAGGGACTCAGAGGGGCCAGGGAGCTCCAGCTCGAGAGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34032 CTTTCACCACCCTTTGTGTCATTAGTTGAACGGTAGTTGAACGGTAGTTGAAGACTCCTT Gene BVV0102_022536 + 0 NULL GK000011.2:75094073-75101824 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028527 TCONS_00028530 TCONS_00028534 TCONS_00028532 TCONS_00028535 TCONS_00028533 TCONS_00028528 TCONS_00028529 TCONS_00028526 TCONS_00028531 1 XLOC_015496 Coding TCONS_00028527 XLOC_015496 Coding Coding UBXN2A 11:75098087-75130892 j TSS20001 6080 2 TCONS_00028527_1 187 0.310197368421053 7 0.814870137788075 5.67485069951942e-08 0.000117833387030236 0.000165498851535627 2.41820059295317e-15 3.12329026687517e-07 8.85944181460809e-06 1.31263437980539e-13 6.22939060636123e-06 2.88658125910596e-05 4.52097742830106e-209 0.000106646985832468 2.57123365278343e-51 1.70718296750648e-53 8.09181895226011e-257 1.55283104817146e-69 0.00118815560838009 0.00116420979791378 0.00124724234174024 4.58524335229738e-08 9.69895998405345e-05 4.3011491242257e-12 0.000616120671120315 0.00110103423087587 0.00151550156961215 8.20571092754129e-06 1.93974199711537e-05 6.66467596907422e-08 5.55063307727198e-210 9.61018906442517e-05 0.000280684802615499 XM_005213043.1 UBXN2A PREDICTED: Bos taurus UBX domain protein 2A (UBXN2A), transcript 0.0 6863 100.00 0.625657894736842 XM_005264166.1 UBXN2A PREDICTED: Homo sapiens UBX domain protein 2A (UBXN2A), transcript 0.0 792 82.44 0.128782894736842 TCONS_00028527_1 sp|P68543|UBX2A_HUMAN UBX2A_HUMAN UBX domain-containing protein 2A; 3e-80 243 89.78 0.727272727272727 1 noncoding 0 0 0 0 -0.0534406345232167 0.715822371242187 -0.0150998730875129 0.826270653135018 GCGCCGGGCGACGGTGACCGAGGGAGGCGCGCGCGGTTCCAGCGGCCCGGCCGCCGAGCTCGGTTGGGCCTGGGGGCGGCTGTGCTCCTCCTCTGAGGGGCTCCAGCCCGGCGGCGGCGGCGACTGCGGCCCCTGAGCGGACTGAGACCGAGGCCGCGAGGCGACGGCGCGGCGCGGCCCCCTCCAGCGGCCGCACCGGGAGTTTGTTGCTTGTCAGCAATAACGAACGTTAGTGTGGCTTCGAGCGCTGGTTTCTTCGTACTCAATCTGAGATCATTGAAAGTAAAGATAGGAAACTGGCAGCCTCTACTAATGTGGGATTGTAAAATAGGACCGATTGTATAAGCGACGTGAGAATCAAGCTTCCTTATTTCATAGTCGTGGCTCAGTAAAACAAAAGAGAATGAAAGAAGTAGATAATCTTGAAAGTATAAAGGAAGAATGGGTTTGTGAAACAGGATCTGACCACCAACCTCTTAGTGATAGTCAACAAAAAAATTGTGAATATTTTGTCGACAGCCTTTTTGAGGAAGCTCAGAAGGTTGGTGCCAAGTGTTTGTCTCCCACTGAACAAAAGAAACAGCCCTTCTCAGGACAAGGTCACAGACTGGGAAGTGCTACACCAAAAATTGTTTCTAAAGCAAAGAATATTGAAGTTGAGAATAAAAATAAGTTGTCTGCTGTCCCACTAAACAATCTGGAACCCATCACTAATATACAGATCTGGTTAGCCAACGGGAAAAGGATTGTCCAGAAATTTAACATTTCTCATAGGATAAGCCACATCAAAGACTTCATCGAAAAATACCAGGGATCTCAGAGGAGTCCTCCCTTTTCCCTGGCAACTGCTCTTCCTTTCCTCAAATTGCTAGATGAAACACTCACACTGGAAGAAGCTGATTTACAGAATGCTGTAATCATTCAGAGACTCAAAAAAACCGCTGAACCTTTTAAAGAACTTTCATAGCATTGATCTTTGATACACTAAGTGGAAAGTTTCCCCAAAAATGATGGTCATAAGTGGACATGCAAATCAAAACAAGGGAAGGTCAGATTTGCTGGGTTTTGCACTGTTTTAATTCCCTGCTGATGAGATTTTAAAATAAGTACAAGTTAGGAAAGTAAACTATTACTGGAAACTATATTCAGTTAACTTTTTCCAGAAGGCTACTCAGAAAGAAAAATATACTTATTTTCAAATACCATTTATTCAACATAAGATATATTCAATAACTTATCATTTAAAGTCTTAATATGGTATAAAGTAAGAAATACGTGCACAGCATCTTCCATTCAAATATCATTCCCAAACAGCAATGATGTGTTTAAATGTTAGCTGTCTCAGATTTTTTAAATGGCAATACATTAGAAAATTATACATGGCAGGTTAAAAGCATCAATGTAATTTTCTTATATCTGAGATACAATCATAAGGCTGAAAGGGTCTGCTTTTACCACAGCTATACCTAAACCTCAGAAGTGTTCCCGATTTGCATACTCCAACAATCGAATATTAACAGTATCTGGGATGTACTTTCATTTAAGAATAAAATTGTAGTTTAGTATAATGTCAGTATCATATGTGCCAACTCATATTTCAACATTTTCAAAATGTGTAGATTTAAAAGAATTCTTTTTTCTCTAGGAACCTGTTTATTCCCTACTTTATTTTCTTTGAAAAACTAGGGGTTTGTTTTTAGCTGACATTTGGAGTGAGCCGTTTGTTTGACACCACTCACATAGAATCTAGTGCTGATGTTGTCACATTACTAATTAACATTTTTAAAATGCGTCATGTGAAGTGTGGTTTTCTATTTCATACATCAGTTGGCCTGTTTATATGTTAAAGGATTGTTTATTACGTTAGATGTCACTAAGGAAAACCTGCTTCACATCTTAGATTTTTAACTAAAACTGGTTCGACTTCAGTATTTCACTGTCAGATTAAATCCTCTTGCCTGAAAATAAGTTTAAGAAGCTTTTTGCAGATGATCTGTTGAATCATATTTAAAGTGAAATATGCATTGAGTGTGCCAGGGAATGAAGCAACCGGGCCTATCAGCAGTAATGTTCACAGGGTACTGGATGCCTACTGGAAAGAAAAGTTCTCAAACTTTTTGGTCTCAAGACCTTTTGTTTATGTGGGTTACACATATTAATGTTATATTTAAAATAAAAGGTTATCAAATATTTATTCACTAAAAACGTGTTAATGTAAAGAACATTTTCATGAAAAATGTCATTTTCCAAAATGTCAAAAGATGGAGTGGGAAACGTGGCATTGTATTTTATTTTCTGCAGACATCTTTACTGTCCGATTTAAAGAAGACAGATGGGATCTCATTTGCTTCCACATTCAGTCTGTTGCAATATCGCACATCATGTCCCCTCTGGTAAATGCTCCTGTACACTCTTGAAAAAGTGAAGAAAAAAAAAAGCAAGAATAACATCTTAATATAATTATGAAAATAGTTTTGACCTTGCAGACCCCTTGAAAGAACTAATCTTGTAAAGCAGTGATTTGCAGTGATCTTCAAGCCTTAATGCATAAGGATCACCTGGAAAGCTTTCACAATGCCTATTACCTGCCACCTACCACACACATTTTAACAATTCGTTGTATTTGGCATGGGTCCCAGATCTCTACATTTTTAATCTCCAGTAGTTCTTAGGTATGTAGTAGAATCTGTCTTCAGGAAATCCTGCACTAAGATGGAAAATCCCATGGACAGAGGGCCTGGTGGGCTGTAGTCCATGGGGTCACTAAGAGTCGGACACGACTGAGCGACTTCACTTTTCACTTTCACTTAAGCTTCCACCCTAGGAAAATAAAACCTGCATGCTTCACCATGGCAGTGTAAGACCTGACTGAAATGGGACTGTTAGACCTTTAAGTTTTATCCTGGTCCCCCACAGTTCGTTTTTACACTGTCTTTCCCTCCCCGACCCCTTAATGCTGACCTGCTCATGATATAAACTTGTGCTTTATCTTCTATAAGCACAGCTGAGACAAGGCTGCAATATTTAAATGAGGTTTTTATTAAAGGCTCAGGGATAACAAAAGGGAAATAGACATATAACTAGATGACCTGGTTTATAATATACCTTCTGTTTGAAATCCATTTGGAGAATGCTTGCTTTTCTAGCTCTCAGCCCTCCACATGGTAGAGTTCTGTTGTTTTATCAGGGAGAGAGGGAGAACAAAGGAGAGACTCTTCCTTTTGTCATTCACCCTCAGAAATAAACAGACACATAACAGAAAATATTTATTGTCGGTAACGTTTACGGCCATGATAGAGCCCTCTTGCTAGTGAAACAAAAATAATGGCATTCTTAAAAAAGTGAGGGGATGCTAAGATCATACATAAGATGACTGTTGATATATTTTCAAGAATCTGTAAGAAAATGTTTCACATAGGCCTATCATGAAGCATTTTATAATTTTCCTTTGCATAAATATGTCAATTTGTGATTCTCCATATACTTATATGAAGGGCCTTCTTGTTGGAAATATTGTTCTCACACGTATAGAAAAGCCTCCCTTATGGGTTTTCCAGTTTACCATAATTACTATCCAGAAGACATTGGAAGTTTTCTTGGGTGTACATGTAGAGTACACCACAATGAGAAGTTCTTTAGAGAAAGACCTGTCATCAGCAATAACCCTCATTTTTGTAACTGTGAAAACTTTACCACAAGTGATATTCTTAAAGGTTTTCTAAAGTGAGAACCACCTCATAAAGCTTTTTATGTGAAAGTGTAAAATTCTAAAGTTGTTAATTAAATGCCTAATATAGCCCAAACATGTTGACTTTAGAAAACAAACTGCATTATGCAAAGGAAGGCAAACTTGAAAATAAGGCAGCATCTTAGGTGTGGAATACAATTTGACCTAAGTAGTTGTTTGAAAACTGGCCTCAATCAATTTAAAAGCATTGTTAGGCCTGTTATATGGAAGTACATATTGAATTTTACAAATTTTAATTTATTGGTTAAATTACTATGCATTATCCAGGTTATAAAGGTGATCTTATTTATTTTATATACTTCTGTCATTTAGAGTAGTTTTCATTTTACTTAATTGTGTTGAAATTATGCATGCATCTATTTCAGTGCCTTAAAGTATTTTGAAAGCAATCTTGATAATGGTTAAAGAACTGTTGTCTTAAAGATGAAACACTGTTCATTAAAAGGATCTGTGAAATAATTTATATTTGTTTGTTATAAATTAGTTACATATGGATGCATTTGTCATTTTTATTTGCAAAGACATTCAGTTTGAGAATCAACAAACATTTATTAGGTGCTTTCTATTTGCCAGGTATTTTAACCAATGTTACTTTCATTTCATACTCAAGTGTTAAAACGTGATACTTTTAAACTCAGTGGTTGTGTTTATTTCTTTCACCACCCTTTGTGTCATTAGTTGAACGGTAGTTGAACGGTAGTTGAAGACTCCTTAGTATGATTTATTCCTTTGTTCTTTCTCAGTAGAAACCTTTTAAACATTGCTCACCACACTGAATCTTCAAATAGAAGTGGCTTATTCAGTAGACTAATATTTGGCTCTTTGTCATTTGATTTAAATGTATGTTTTTTACATAGATAATTCATATCCACTGGAGAAAATTATACAGTTATGCTGAAATGATCTTTAGCTCACCTATTCCACCATTCAGAGATAACCACTAATAACATTTTGGTGTGCATCTTTATGGATATTTTTAAGTGTATCAGTATTCAGTTTTGTTTTAAAAACAAACCTCTTGGTTGTTGTAGGCCTGTTTTATTTATGGAATTCTATTGGTCCTTAAAAATTCTATTAGGACTATACCGCCACTTTAAGTAGAATAGTAACAGGGGAAATGCCTTTTAGTTACATTTCTGTGCGAAAAAGGGAAGGAGGTTAATGTAAGTGGAATCATACAATATTGCTGTCCTTTGTGACCAGCTTTTTTTCCACAACATAAAATTTCAAGGTTCATCCATGTCCTTTTTATTGCTGAGTAAAATTGTATGAATATTCCTAACATCCTAAATATTCACCCATTAGTTGATGGACATTTGGGTTGTTTCGACTGTTTCAGTTCAGTTCAGTTACTCAGTCATGTCCGGCTCTTTGTGACCCCATGAATTGCAGCACACCAGGCCTTCCTGTCCATCACCAACTCGTGGAGTTCACTCAAACTCACGTCCATCGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCTTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTTTTTTCCAGTGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCACGGGACTGTCAAGAGCCTTCTCCAACACCTCAGTTCAAAAGCATCAATTCTTTGGCACTCAGCTTTCTTCGCAGTCCAACTCTCACATCCGTACATGACCACAGGAAAAACCATAGCCTTGACCAGCTATTATAAATACTTTAGTTCTCAAGGGCTTCCCTTTGACTTAGCTGGTAAAGAATCCATCTGCAACGTGGGATACCTGCGTTCGATCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATCCCTTGGACAGAGGAGCCTGGCAGGCTGCAGTCCATGGAGTCCCAAAGAGTCAGACATGACTGACTTTCACTTCATTTCTCTTCACTTAATGTTCAAGTTATTGTGTGATCATGTTTTCATTCCTCTTACATCTTTAGAAGTGGAATTGCTGGATCATATAATTTCATACCCAACTTTTGAAGAACTGCCAGACTTTTCCAAAGCACCTGCACTAGCAGTGTATGATTTCCCACATCCTTCCCAATCCCTGTTATTGTCTTTTAAATTACAGCCTTTCTAATGGAGTGGGTTCTTGTAGCTTTGCATTTCCCTAATGCCATGAATGTCTTTTCGTGTGCTTATTGCCCATTTGTAGGCTTGGAGAAATATCTATTCAAATCCTTCACCCAGTTTTTAACTGTACTCTCTC EMBV3_00360 GCGGGCTGCCGGCCTGGGGCTCCTGGCTCTCTTTGTCTCAGTAAAGGACCTCAGGACCCA Variant GeneID:513500|LOC513500:XM_002695868:357_cdna 53^216 1 EMBV3_32863 GeneID:513500 19 GENE LOC513500 NULL similar to Uncharacterized protein C17orf68 (HBV DNAPTP1-transactivated protein B) EMBV3_06856 CCTTCCCTGTACAGTCCAGTTTTCCTGTATTTGAAACAGCCAGGACCGTGAACTTGGCTG Gene BVT0101_064348 + 0 NULL GK000008.2:104996039-105006305 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226578 TCONS_00226579 TCONS_00226572 TCONS_00226573 TCONS_00226580 TCONS_00226576 TCONS_00226574 TCONS_00226581 TCONS_00226569 TCONS_00226570 TCONS_00226575 TCONS_00226563 TCONS_00226571 1 XLOC_138038 Coding TCONS_00226578 XLOC_138038 Coding Coding ZNF618 8:104841371-104999192 j TSS169373 6215 1 TCONS_00226578_4 867 15 0.960714738309467 0.00049114701287523 6.06099181720562e-06 0.000542555164238374 0.000173535398881369 0.000353297166891972 0.000108239345649821 0.000238068202073552 0.000317395129087017 0.000211901128709822 0.000320362594669334 5.16347915836066e-06 9.83848342446305e-26 0.000141571111858207 6.63991919972172e-05 0.0002023989002169 1.28788541312744e-12 8.1462919210967e-41 9.16150971093604e-16 0.0003737678372932 0.000684509562660724 0.000200571963125089 1.14012430233132e-13 5.77299826348429e-26 0 0.00113508703527358 0.000368520341806191 0.000477683683088948 2.2379292338323e-05 2.34604102738718e-05 1.98508282774645e-71 XM_005199297.1 ZNF618 PREDICTED: Bos taurus zinc finger protein 618 (ZNF618), transcript 0.0 5369 99.31 0.486725663716814 XM_005251695.1 ZNF618 PREDICTED: Homo sapiens zinc finger protein 618 (ZNF618), 0.0 4150 92.01 0.463073209975865 TCONS_00226578_4 sp|Q5T7W0|ZN618_HUMAN ZN618_HUMAN Zinc finger protein 618; 0.0 1774 95.22 0.998846597462514 3 coding 0 0 0 0 -0.440100254294534 0.0631961222402119 -0.0145686806135443 0.797278268654243 GCCTCTCCTGGGTGGTGAAGTTGAGGCTGACGAGTCAGGACAGTGGAGGAGGCGGGGGGCCAGTGGGTGGTTCCCACGCTCAGCCAGGGACCCTTACCCTTTGCTGCCCCTGCTGCCTGGGGAACCTGCCAGAGAAGGGAGCCTTCATCCTCCCAAGGATGGAGGATCTCCTCCATCCAGCCACTCAGGGCAGGCAGATCCTGGTGCAGAGCCTGGATGCCCAGCAGCAGTGAACGCTAATTCCTACTGGCCAGCTATCAGCAGGAACAGGCTGACGGAGCCAGTGCAGCTGGAAGGAAAAGCGCGGCAAGCAGGGAGCGCTTGAAGCGCAGCCAGAAAAGCAACAAGCTGGAGGGGCCAGAGCCCGTGCCAGCTGAGGCCTCGCTCAGCACCGAGCAGGGAACGATGACGGAGGTGAAGGTCAAGACGGAGCTGCCGGACGACTACATCCAGGAGGTGATCTGGCAGGGCGAAGCCAAGGAGGAGAAGAAGGCGGTCAGCAAGGATGGGACCACCGGCGACGTGCCTGCCGAGATCTGCGTGGTGATCGGCGGCGTCCGCAACCAGCAGACCCTGGGGTCCTATGAGTGTGGAATCTGTGGCAAGAAGTACAAATATTACAACTGTTTCCAGACCCACGTCCGGGCACACCGAGACACTGAAGCCACCTCAGGAGAGGGAGCCTCCCAAGGCAACAACTTCAGGTACACGTGTGACATCTGTGGGAAGAAGTACAAGTACTACAGCTGCTTCCAGGAGCACCGAGATCTGCATGCAGTGGATGTGTTTAGTGTGGAAGGGGCCCCTGAGAATCGGGCAGACCCCTTCGACCAAGGTGTCGTGGCCACTGACGAGGTGAAGGAGGAGCCCCCGGAACCATTCCAGAAAATCGGGCCAAAAACCGGCAATTACACCTGTGAATTCTGCGGAAAACAGTACAAGTACTACACGCCCTACCAGGAGCACGTGGCCTTACACGCCCCCATCAGTACCGCCCCCGGGTGGGAGCCACCGGACGATCCAGACACAGGCTCTGAGTGTTCGCATCCAGAGGTCTCCCCGTCTCCACGCTTCGTGGCAGCGAAGACCCAGACGAACCAGTCGGGGAAAAAGGCTCCGGCCTCCGTGGTCCGATGCTCCACCCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAACTCGGGATCTCCAGCAAGCAAGGCGACCGCAGCAGAAAGCGCTTTCAGTCGGCGGGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAATAGCAGTTCCCAAAACTCCAGCGAGCCCTACACGTGCGGCGCCTGCGGGATCCAGTTCCAATTCTACAACAACCTGCTGGAGCACATGCAGTCTCACGCAGCGGACAACGAAAACAACATTGCCTCCAACCAGTCCCGATCGCCCCCTGCTGTTGTGGAGGAGAAGTGGAAGGCCCAAGCCCAGAGGAACAGCGCCAACAACACCACGACCAGTGGTTTGACACCCAACAGCATGATCCCCGAGAAGGAGCGGCAGAACATCGCAGAGCGGCTGCTGCGGGTCATGTGCGCCGACCTGGGTGCTCTGAGCGTGGTGAGCGGGAAGGAGTTCCTGAAGCTGGCCCAGACGCTGGTGGACAGCGGCGCCCGCTACGGGGCCTTCTCGGTCACCGAGATCCTGGGCAACTTCAACACGCTGGCGCTGAAGCACCTGCCGCGCATGTACAACCAGGTGAAGGTGAAGGTGACGTGCGCCTTGGGCAGCAACGCCTGCCTGGGCATCGGCGTGACCTGCCACTCGCAGAGCGTCGGCCCCGACTCTTGCTACATCCTCACGGCCTACCAGGCCGAGGGCAACCACATCAAGAGCTACGTGCTAGGCGTGAAGGGTGCGGACATCCGCGACAGCGGCGACCTGGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCGTGATGTCGGAGATCAGGACCGTGTACGTGACGGACTGCCGGGTGAGCGCCTCCGCCTTCTCCAAGGCCGGCATGTGCCTGCGCTGCTCAGCCTGTGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAAGCGGACGCTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCTGCTCAACGTGTGCGAGGACCTGGCGGGCTCCACCGGCCTCGCCAAGGAGACCTTTGGCTCGCTGGAGGAGACCTCACCGCCGCCCTGCTGGAACTCGGTCACGGACTCGCTGCTGCTGGTGCACGAGCGCTACGAGCAGATCTGCGAGTTCTACAGCCGGGCCAAGAAGATGAACCTCATCCAGAGCCTCAACAAGCACCTGCTCAGCAACCTGGCCGCCATCCTGACGCCGGTGAAGCAGGCGGTCATCGAGCTGAGCAACGAGAGCCAGCCCACCCTGCAGCTGGTGCTCCCCACCTACGTCAGGCTGGAGAAGCTGTTCACGGCCAAGGCCAACGACGCGGGCACCGTAAGCAAGCTGTGCCACCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGTGCACCCAGCGCACAAGGTGGCCATGATCCTGGACCCGCAGCAAAAGCTGCGGCCCGTCCCCCCCTACCAGCACGAGGAGATCATCGGCAAGGTGTGCGAGCTCATCAATGAGGTCAAGGAGTCCTGGACTGAGGAGGCCGACTTCGAGCCTGCAGCCAAGAAGCCCCGCTCCGCCCCCGGAGAAAACCCTGCCACCCAGGAGGACGACCGGCTCGGGAAGAACGAAGTGTACGATTACCTGCAGGAGCCCCTCTTCCAGGCCACCCCCGATCTCTTCCAGTACTGGTCGTGCGTGACCCAAAAGCACACGAAACTCGCCAGGCTCGCCTTCTGGCTCCTCGCGGTGCCGGCCGTGGGGGCCAGGAGCGGGTGTGTAAATATGTGTGAACAAGCACTTCTCATCAAAAGGAGGCGACTGCTCAGTCCAGAAGATATGAACAAACTCATGTTTCTGAAATCCAACATGCTTTAAGACTTCCAGATTGAAAAAAAAATACGAAAGAGAAAAAGAAAAGAGAACGTTCAAAGAGGAAGGAAAAAAACCCACACAACACTGTCGCAAACAAAGAAGAGCAATTTAAGTTCTAAACACTGTGGACCTCATTATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGCGTGGCTGCCGAAGTGTTGCACACACGTGCACACACATACTCCCCTGGTGCATGCATGCATGCTCCCTTGTGGGCACGTGTGCATTAAACTGGGCGTGTCAGGAAAGCTGAGTGTTTGGGAAAGAGGGAAGACGCTTCACTTCCTTTTCTCAGTGAGGGGGCTTTAAAAGACTCCATTTTCAGGTGTGCAGATTGTACAAACTGATGTTGTGAAATGTTCAGGCAGCTGAGATCTGAAGTGACTTGACGCTCTCTATCCTTCACCCTGTGGTCCCCCTACTGCCCGTCACCCCTGCCCCTAGTCTTCCTGACCCTATCACACCCCACTCCTCCCCAGCTGCCCTGCCATGGATTCTCCAAACTGCATCAGATGGACAGCTTCTGCACTGGACTTTGTTCTCGTTCACCTTCAGGGCATTGAGCTGCTGCCTTTACGATACCCCTGGGTGTCAGGGGGCAGCCGCCTTAGAAACACACCTATCTATTTCCCCAAATCAGGAAAGGAGACTTTTAAGAATATAAAGCTGACCTTTTGCTTTTTAATATAAGAGAGGGAAAAAAAGACATTTTCAAAGAAGTATAAGATAACTGTCTCCACTCCTTAATAATTTTTTCCTAACATTTTAGCAGTTTTTGCCTTTTTTTTTTTTTTTTCAAATTTGATTTAGACTCTGCTAGGAGGCACTGAATGTCTATAACTTATATTTTGGAGGGTTTTTTTGTGTTTTTTTTTTTGATTGCCCTTTTTGTTCCTCGAGTCACACTGTAAACTAGCTCATCTCAGTGGTGTATTCAGTATCCTGAGGTTTTTATCAGCCTTCCCTGTACAGTCCAGTTTTCCTGTATTTGAAACAGCCAAGACCGTGAACTTGGCTGTGCTGTTTGGAGATCAGGAGAGGTGTTAGAGTCACAGGTCTCGCAGACGTGGGATTTGGTGGAAGCCACAGAGAAACGTGGCTTAGGAGTGCTGACTGTAAGTGGAAGACCGCCCTCCTGGCTCGCTGCGTCTGGTCCTGCGAATGTCTGATTTCTGTACCCAGAGTGCATTACACTACTTGCCGCGTCACTGACCCTTCGGCTCAGCAGGGAATCCTGAGTTGATCCATGTTCGCATCCATCACACCTCAGACCCACAACCTCCTCTTCCTCCCCAGGACCCCTGAGATTCTGGGAGTTCCACTGCCCACGGCCCTGGGGGTCCCCCACATGAGCCTCAGCCCTCCTTCCAGGACGGTGGTTGAGCACGGTGCCTTGCGGGCCAAATGACGGATGTTTGAGGGTGGAATGGCATTAGGCCACATTCAACTTGATGCTGTGAAAGATGGTTTTAGGCTTTTCTTCCTCTGTGAGCGGTTTAGGTTCCACACACTTAGCCTAAATGCCAACAGGGTGACCCTTTCCCCTCTCAAGAGGTGGTTTTGTTAGGATCAGTGCTCAGCCTCCCACCCCACCTCTCAGTGAATATGTACTGGTGATCCAGTATCCCCTCGGTGCCCACCATCGCGGGGGGCACCATTTGCAAAGGCACATTCTACCATCCTGGGGGGCTGACCAAGTCCAGCACATCCCTCCTTAGTAATAAAACATTGTTCAACTGCGAGATACCTCGATTTCCAAAAGCACTGTACAACAGCCCTCTCCCCGCTCCCCGGTCCATGGCAGTAACGTTGGGGAAGTTAATTTAAAAACTCAAGGCTTAGGATCATGGACCAGAACACTGTCCCGGGTGCCAAGCCTGCTCAATTTGCCTCGTGAGAACTAACCCTCCGCATCTTGGACATACTGAAATGCATCCCAGAGGGTCGTTTCCACGTTCACTGCAGCAAGCCATGGTCTCAGGAACCACCATGCCATTTCCTCTCCTGGAGAAGTTCTGGGCACTTACTCCACGTTTCCAAGGGGTGTCAAACCATCAGAAGAGCCTCTTACCTGCACTGGACAGTCACCGCTTGTCACATTCTATAGTATATGGGAGCATTGACAGGCTATTTGATGAGACTTTGGGAGACCTTCCAGAAGGTGGCTGCAGGCTTGCTGGTGGGTGAGATGCCTACAGCCAAAGGCCTCCAGCCTTGCTGCCGGGGAGACCTGGCACTCTGAGCCACACAGGAGGGTGGAAGCTGCCTGTGTTGTGTAGTTCGTAGGAGTCAAGCCTCGGAGCCCATCCTCTCTCTGCTTTTGAGCGGGGAGCTGTGCTGGTCTTGCCTCATTTTAGGGGCCACTCCACAAGTCGGCATTTCACTGTGTTGCAAAGCCGTCAGGACCAAGCCCAAGTATCAGCGTCCTTCTCCTTGGAACTCGGGGATGTCTGCCCTCCAGCATGAAATTTCTAGGAAGTCTTACTAAATTCCAGGTATCTAGTTAAACGTGTCACCTCCTGTTCTGTCCCTCCTTTCCACCTCAGTTCGATCCTTAGGGCTTGGCTTACTCTGCAGAGATGACGTGAGTGCCACTCGGTTTCTGAAGGCTGTCTCCTGGGACTGCCTCATCCAGATAACAGGCATAAGGTCGCAAGTAGTCATTTCTCTCTTCCAGTCTTTAGTCCTTCAGACACTCTTGTTGCCAGTAGGAAGGGCTGTACCAAGGTGCCCCTTCTCTGTCTGCTTTCTCACACAGGCAGCTCGCCTACTGCAGATCCCCTTGCAGTGAACAGCTTAATAAAACCCAAAGATCTCACAGGCCTAGCCACTGGCCCCTTGTCTCCAGCAATATCCACCCTATCCAAATTCTAGCTCAGCCAAAGGATTGAGGTCGGCTCTTCCAGCTCATCTCCTGGTGCCTGCCCTGACATGGACCTTCAGAAAGTTTCTGTCTTCTGGCTCCCCGTTCTGTGGCACTGACCACTATGGGACTCTACAGCTCAAGGCAGTCAATTGCCTGCTGACTTGGACACAGTTTGCCAGAAGTGTGTGATTCCCAGGACATAAGGGGCCTTGCTGCTGACATGCATGGACCCCAGCAAGGAGGCGGAGAAAACACGTCCACTCTGCAGGGTTTTCCTGCCTCCTCTGAGGTCAGTCAG EMBV3_14858 CCCGCCGCAACCATGCCCAAGTCCCAGTCTCTGCTGCACGTCAACGACGACCTCAACAAC Variant GeneID:616315|TOM1L2:NM_001099154:108_cdna 630^917 1 EMBV3_19938 GeneID:616315 19 GENE TOM1L2 MGC157155 target of myb1-like 2 (chicken) EMBV3_18950 CAGAAGTGCCAGAGCCAGGTATGGAAATGCAGAAGTGATGCTACTTGACAGCAGGGATGC Gene GeneID:541272|IDS:XM_002699632:8_cdna Constitutive 0 NULL GeneID:541272 X GENE IDS NULL iduronate 2-sulfatase EMBV3_09258 TCAGTGCCAAGAGAGGATCCAGGCGAACACAATCAGGGAAAAGAGAGGGAGCAGCAGTTA Gene BVT0102_186371 + 0 NULL GK000025.2:11496811-11543117 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42626 GGCTATATCCCACAGGTGCCCTCAGTACCTCAGTGGAACAAAACTCTTACCAAAGCAGAG Gene BVT0102_065466 + 0 NULL GK000004.2:113151010-113238977 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182848 TCONS_00182849 TCONS_00182850 1 XLOC_111000 Coding TCONS_00182849 XLOC_111000 Coding Coding ZNF282 4:113133561-113153878 = TSS136581 4510 1 TCONS_00182849_3 546 0.0447893569844789 6 0.778302815514865 0.00150358713343949 0.00136835589899715 0.00183693737024064 0.00132682742679993 0.000139533378929917 0.000614591600155486 0.00203524715080572 0.000903754448514298 0.00162301978654736 0.000388795267372438 9.24789190686482e-06 1.40434531858057e-05 0.000453167723955089 0.000478114288756824 0.000450846932524407 0.00170403382644439 0.000220760904354922 0.00195258083783342 0.00182325205430902 0.00206348584962814 0.000359195621816545 0.000937815134162019 0.000262344341821606 0.000384001191316983 0.000894892063573348 0.000814313879775129 0.000922135574825302 0.000188061865957631 9.038461741957e-05 0.0004855364701696 XM_003582160.2 ZNF783 PREDICTED: Bos taurus zinc finger protein 783 (ZNF783), transcript 0.0 6938 100.00 0.852771618625277 NM_001195220.1 ZNF783 Homo sapiens zinc finger family member 783 (ZNF783), mRNA. 0.0 1736 80.36 0.416407982261641 TCONS_00182849_3 sp|Q6ZMS7|ZN783_HUMAN ZN783_HUMAN Protein ZNF783; 4e-144 421 81.95 0.481684981684982 5 coding 1 0 1 1 -0.184046415392437 0.258355141254193 0.0532153434978238 0.394154894842066 ATGAACTTCTTCCTCACAAGACCCTACATGGCTCCAGAGAGGGACAAACCAACAGGGGATGAAAGGCCTTCGACTCCTTCTCCATCACCCCAGCCGGCCGCTGAGAAGAATTCCTACCTCTACTCCACGGAAATCACGCTGTGGACGGTGGTGGCCGCCATCCAGGCCTTGGAAAAGAAGGTGGATTCCTGCCTGACCCGCCTGCTGACTCTGGAGGGGCGGACAGGGACGGCTGAGAAGAAGCTGGCCGACTGCGAGAAGACGGCCGTGGAGCTCGGGAACCAGCTGGAGGGCAAGTGGGCCGTGCTGGGGACCCTGCTGCAGGAGTACGGGCTGCTGCAGAGGCGGCTGGAGAACATGGAGAACCTGCTGAGGAACAGGAACTTCTGGATCCTGCGGCTGCCCCCGGGCAGCAAGGGCGAGGTCCCCAGGGTGCCCGTGACCTTTGATGACGTGGCCGTGTATTTCTCTGAGCCAGAGTGGGGCAAGCTGGACGAGTGGCAGAAGGAGCTGTACAAGCACGTGATGAGGGGCAACTACGAGATGCTGGTCTCCCTGGATTATGCCATCTCCAAACCAGACATCCTCACCCGGATGGAGAGGGGAGAGGAGCCTTGTCCTGAAGGCCCGTGGGGCCGGGAGGAAGGGAACGAGAGAGAGGAAGTGTGCCCCAGGAGGCCAGGTGCAGGCCTGCCTCCGTACCCAGAGCAGATCCCCAGCCCGGTGAGCCCTGCCCAGGAGGAGCCAAAAGAAGGTCAGGCCCTGGAGCACCAGCCAGACTGGGAAACAAGGGTGACCCCACCGGAAATGGGCACTGGGGGTGATGCTGTGGTCATCAAGACGGAAGCACCATCTGAGGACGAGATGACGCCAGAGCCGCCCTTCCCCGGGGCGTCCCCGAGCCGGGCCGCGTGTGGAATCCCCAAAGGGCCCAGGAGCAGGACCGGGGGTTCCAGCCGGCTTCACGCAGGGGGCGTCCCCCGGGCGCGGGCCGGGGACTCCCGGTCCACGGGGGCTGGGACCCAGCCACCCCGCGTCCTCCCGCGTCGGCAGGAGCGGGCCTTCCCCTGCCCTGACTGCGGCCAGAGCTTCCGCCTGAAGATCAACCTGACCATTCACCAGCGGAGCCACGTGGAGGAGGAGCACCGGGAGGCCCGGGGCGGCTCGCCCACCGGGTGGGGGGATGCGCACTCGGCTCTGGAGCCGGGGGAGGTGGTGGTGCCCGGCCCAGTCATCCGCTGGCTCCCGGAGGAGCGCGAGGGCCGCCGGCCCTTCGTGGGGCGGAGGCCGGCGACAGCCAAGGTGTACCACTGCAGCGAGTGCCTGCGCTTCTTCCAGCAGCGGAAGAGCCTGCTGCTGCACCAGCGCCTGCACACGGGCAACAGCCAGGGCTGGCCCGCCTGCCCCTACTGTGGCAAGGCCTTCCGCCGGCCCTCCGACCTCTTCCGGCACCAGCGCATCCACACCGGCGAGCGGCCCTACCGGTGTCCTCAGTGCGGCCGGGCCTTCAACCGCAACCACCACCTGGCGGTGCACATGCAGACGCATGCCCGGGGCCAGGTGGGCCCGCCCTGCCCCGGGCCCCCCGCCCTCCTGGGGAGCCCGCCCCGGCCCCGGCCCAGCCGCTTGGAGGAGGGCTGACCAGCAGGAGCCTGCAGGGTCATCCTGGGCAGGACCTTCTCTTCCCCGCCCCTACGGAGCTTTTCCACTCGTGCCTGATGCTGGTTCCTTCTGGGATGGCTCTGGAGAGATCCCGCCCCGCCCCCCCTTTATTCAAATGGGAAGCAGTGGCCTTTATGGTGACAGAGTGTATAGGGTGACCAGATGCCTCAGTTCCTTGTCACTCTTTGCTGCCCTTTCTACATTCCTGACTTACAACGGTTCCATTAAGGCTTAGGGGAGTCCACACTTTGGTGGGGGCCTTTGACTAGTAGCATGGAGGGACAAGAGAGCCAGGGTGATAGGGACATTGAGGGCCTGGGGTTTCTCCATCAACAAGAGAAACAGCAGAGTGGACAGAAAGCCTGAAGAATAGGTGCTGGAAATTTGAATTTGTTACTATTATTTTGAAACTTCCTTTTTTATAGTTTTTCTAAGTGCTTTTGTAAGTATTATGTGTGGTTGTAAAGGGGACCAAGATCTCCTGAGGGATAGGAATTAACCCTGCCGCCTCCTTGAGAGGGGATGGCAGAGGCACTGTCCAGACCAGCCTGGGGGTGCCTGCTGATAGTGGTGCCTTGGCTGCTGCCCTGGAAACCAGGTGTCTTCCTAGATGTGTATGCTTGGCCCAGAGTGATTCCCAGTATTTCCCGTTCTTTCCTCAGTGGGTGTTTGCATCCGTGATTAACTCTGGTAATCAGCTGAGACGGGGGAACTAAAGCCTGGAGTGGATGACATTTCCCCCAGGGTCTCAGTGTTCATGCATGCTCCATGGACCCCACCTGATACCTGGGGGGTTGTGTGGGGGGTCAGGTGCACCATGGGCCCAAGAAGCCCTTCCCCTAGGGGAAGGTCCTACTCAGAGTGAGGCTGGTGAGCCAGTGTGGACTGTGGGGTTGCCAGGCCTGACTTGTCATGTTAAAGGACGGAGTGTCTTCTAGAACTTGGGGCTCATGGCAGAGTTAGGCCAGGGGATCTAGGTGAATCTTTTAGCCACCACCAGCCTCACGTTCCTTATCGGTCGAAGGTGACCCACCTGCATCCTCCACCTTAGATTTGTCACGGTCATAATAGATTTGGAGTCAGCGGAATCATAGGAAGCCTAGTTTTTGACCTTTCTTTCACCTTCAGGGCCCCCTTCATCTCCACCCTTTTTCCACTCAGAATCACTCAAGAAGGACCTTTATTTTCTGGAGTGAGTGGAAGGTCCTTCGAGTGCAGAGTGAGATGAGACTTTCCCTTTGGGCTATATCCCACAGGTGCCCTCAGTACCTCAGTGGAACAAAACTCTTACCAAAGCAGAGGTTCAGACGGGTGGTTTGGACAATAGCATCAGGCCTCAAGGAGACGTCCTGATGGCAGCTAGCTTCTTGTGCCTCTTGAATCACACCACTTTGGGTGCTACCTGGAGACCAGCCCTTGGTTTGGCTGATTTTGAAGCTGCAGTCATGGGTCCTCAGCTGTTCTGATTGTTATCTTGTTTGTCTGGCACTGTGTGGAGTGTCCTGTGTTCAAGCCTGCTTCCAGGTGCCTGGGTCCCTAGCTGTGCCACTTCCTGTTGCCCCCCTCTGACATTTCCTACCTCTCCTAAAGTCCTGAGCAGAGTTGGGGGCGGGTGGAAACACTGCTTTCATTTCTGGGACAGAGTATACACGTCAATGACAGCTCAGCCAGGCCTGCCATAGATTCTGTTTGCTCTTGCATCCTCCAGCCCTTCCCAGAGGCCCCACAGTCCGGACTGGGCTGTCAGCAACTGTGCAGACAGGATGTGGTGCTAGTGTAGCTGATGAGAGCTTAACCCTCAGCTACAGAGTTAGTCTCAGGTGTTTCCTTGGGGATGCTTCAGGGCTCAGAGCTTCTAGGCCTTTCTAATGCTTAATGCCCTATGTAAATACAGAGACTCAGACCGAAGGAGTGATCGCTATGCACTGGTGCTCCCCCCTTCTTCCAAAGCACTCAGTGTGCCAGGCTCCAGGCTAGGCCCTGCGAGTTTGCATGGCACTCAATAGGTGTTCAAAAGACCTTTCTTTACACTAAAATGAATCAATGGAGACTGCGTGACCTGGAAGGATGGAACCTGGTTTGACTCCAGCTCTGGGTCTCGGGTGCCTTGTTCGTAAAGGAGAAGTTGGGGTTCTGGTGTTAAAGGCCCTTAAGAACTGTGACGGTGGCGGAACCTTGGCTGCATCCTTGCTCAGTAAATATGCTGAACTCAAATGAGTGCACGTGATCTGGTTCCTGCTCTCTGGGAGTCAGCGGCGGTGTGGGGAAATCTCCGCCCCGCCACGAGAGTGAACCGCTCAGCAGGACCCTGGGAGCCGCGTTAGGGCTCACACCGCAGGGGCGGGGACTCCGGGCCGGCCAATTGGGGGGTGGGGTAGGGGGGGCTCTGGGATTGCACGGGGGGCGGGGTTTCCTGGTCCGGCCAATGGGGAGCTGCCTCTGGCCGGGGGGGCGGGACCCTGCACGCAGACCTGGGGCAGCCTTCGCGGCGCTCAGTTGATTGACTTGCTGTGTCCTTCCAGGAGGTTCTTGTGTTCCCACGTGCTTCGAGCAGCGCGCCAACCGGGGAGCCCAAGGGCTGGCCTGCGTGGGGCGTCCGCAGTGGTGGCGGCGACTCCTTGGCCTGGCCTCACAGTGTTGGGCCATGGTGGGTGGCCCAGCTCCCGTGAGGGCGGCCCTCACAGAGGATAACCCTGCCCTTCTGGAATTGGAGAGGTTCAGTCTGGGTAGTGTCAGTCGCTCAGTTGTGTCTGACTCTTCAGGACACCCATGGACTGTAGCCCACCAGGGTCCCCCGTCCATGGGATTCTCTAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCT EMBV3_10697 AGTTGGTGTTGGAATCCTCAGAAAAACATGTGGGCCAAACCCTTCAGGCATCCTCTGGAG Gene BVV0101_052797 - 0 NULL GK000016.2:2914080-2930873 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31108 GAGAAACCGACAGTGGTGACTTTCCACCTGCTTCTATACTGTGGCTCCTAGGGTGGGTTT Gene BVT0102_023078 + 0 NULL GK000023.2:30376301-30396497 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42568 TTCCCGCCATCTGTGCCTCGAAGCCTGGGCTTGCTGCCTGCCTTGCGCCTAGAGACTGTA Gene GeneID:514307|INPP5J:XM_002694627:92_cdna Constitutive 0 NULL GeneID:514307 17 GENE INPP5J NULL inositol polyphosphate-5-phosphatase J EMBV3_11420 ACGACATGCAGGTGGTCATCGGCCAGCAACTGCGCTCGCAACGCCAACAAGAGCTGAGTG Gene GeneID:507073|CCDC64B:XM_002697938:613_cdna Constitutive 1 NULL GeneID:507073 25 GENE CCDC64B NULL coiled-coil domain containing 64B EMBV3_01007 AGATTTTGAGATGGCATTTTCTCCAATGCAGGTGATTCTGGGGTCGGGAAGATCCTCTGG Gene GeneID:519309|LOC519309:XR_083916:114_cdna Constitutive 0 NULL GeneID:519309 18 PSEUDO LOC519309 NULL similar to zinc finger protein 790 EMBV3_35561 AGGTGGGCATGACAAACACGCCATAGAATATAGGCAACCCAAGACAAAAGCCTATGGAGG Gene BVV0102_143878 + 0 NULL GK000004.2:13589538-13938834 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41213 ACGCGTCCCTCATCCGGACCATCATCGGCGGTTCCGCGGCGCACCTGTCATACCTGTTGC Variant GeneID:532824|EEFSEC:NM_001083464:38_cdna 325^532 1 EMBV3_37001 GeneID:532824 22 GENE EEFSEC MGC148713 eukaryotic elongation factor, selenocysteine-tRNA-specific EMBV3_31847 GCTGAGCTTCTCTATGCTCTTCGTGCCATAACTCGGCATTTGACCTGAAGCATCACCCAG Gene GeneID:515914|SESN3:XM_002692957:76_cdna Constitutive 0 NULL GeneID:515914 15 GENE SESN3 NULL sestrin 3 EMBV3_35029 ACCCAAAACAAGGGTGTATGGGTGAATGGTCTCCAAGTGGACCTCCCAGCTGAGGTGTTA Gene GeneID:534348|FCGBP:XM_002695058:410_cdna Constitutive 0 NULL GeneID:534348 18 GENE FCGBP NULL Fc fragment of IgG binding protein EMBV3_33121 GCTAAGCGCAATGTGGACCTTCACCCTAGGAACAATAGCATGGTGGATGTTTGCCCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06522 AGACTGAGACTTTCATGTTCTGAAACCTGGGACGCAAGTCTGGGAGTAGTAGGGTTGCTC Gene GeneID:511042|NMNAT2:NM_001075486:23_cdna Constitutive 1 NULL GeneID:511042 16 GENE NMNAT2 MGC143148 nicotinamide nucleotide adenylyltransferase 2 EMBV3_03480 TCAGTGAGGGTTGCATAACTAGAGCGAGCTGGCCCCGAACTCTGGTTCTTACATGTTCTC Gene BVV0102_064725 + 0 NULL GK000013.2:17185065-17380739 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044557 1 XLOC_026230 Coding TCONS_00044557 XLOC_026230 NonCoding Coding - 13:17208384-17380375 - TSS32735 487 1 TCONS_00044557_1 49 0.0780287474332649 3 0.997185882900169 0.000670505831472262 0 0.000635490234515725 0 3.04139129099124e-05 1.46901346355026e-05 0 0 0.000129612015997544 3.37946308174611e-05 0 0 0.0001060514232129 0 0 0 3.30369948180929e-35 0 0 0 0 0 0 0 2.90905872493276e-05 0.000101269658402556 5.06464487755824e-05 0 0 0 0 noncoding 0 0 0 0 -0.198522502637025 0.472806683978533 NA NA CCTCCTGCTTTGCAGATGAAGAATTTGAGGCTCAGCAAAGTTTTTACAGCAAGAAACCAAGGCAGAAACAATGTCTCTTACCCTTTTGATGATGAAAAATTGGATTTCTAAGAAGACAAATAACTCAGTGAGGGTTGCATAACTAGAGCGAGCTGGCCCCGAACTCTGGTTCTTACATGTTCTCCTGCTGCTGCACAGCAGCCGCTGAGAGGGTCGACCAGATGACCTGACAGCCCTTTCGTGATATAGATGCAGCAATTCTGTGTTGCCCTATTTGTGTCTTTGATTGGACGCCTGAAGCTGCTTAAACCCTGCGGCACTGGAAAAAAAAAAAAAAAGTGTGGTCATTACTATGAGCCATGGCAAAGAAATCCTCTTCCAGTTTGGATTTTAAACTGACTTTTTCCAAATAACAACATCCTGTTTTTAAATTAATTGCATGCTGCTGTTTGCATTGTAAAGGATCACATGTGAATTCAGAGAAACT TCONS_00044558 s 5' 0 TCONS_00044558 s 5' 0 EMBV3_42272 TTGGGTGTTTGGCTGTCTGCCTTCTCTTCGTGTTGGCCTCTGCACACTATTCCTGTTGGA Gene GeneID:615997|TSPYL5:XM_002692787:65_cdna Constitutive 0 NULL GeneID:615997 14 GENE TSPYL5 NULL TSPY-like 5 EMBV3_05404 TGGTTACTTCCCAACAGTCTGAGTTAGTTAACAGCAGACCTTGCAGCTACTTTGTGTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11394 TCGGCAGAGGGACCTTGGAGCAGCTGACAGACCTGGAAGCTGCCTGGCGCGTGCCGGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19634 TGCTTATGAACTAATTGATTTAAAATAGCCTGTGGTTATAAGCTCACAGGCTGGATTCTG Gene GeneID:533798|ACSM3:XM_002697986:58_cdna Constitutive 0 NULL GeneID:533798 25 GENE ACSM3 NULL acyl-CoA synthetase medium-chain family member 3 EMBV3_39445 CCAAAAGATTTGGTTATCATTGATGACAGAGTTTCGTCAGGTTTTTAGAAGGCTATTATA Variant GeneID:534118|FIG4:NM_001076014:50_cdna 349^472 1 EMBV3_01761 GeneID:534118 9 GENE FIG4 SAC3 FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae) EMBV3_02697 GCCCTGTAGATGCTATTCCCCACGTATCTGCTGCCCTCCTCCCACGCTCAGACCAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17772 AACATGAATCCAGATGGCATGGTTGCTCTGCTGGACTACCGTGAGGATGGTGTAACCCCA Gene GeneID:326599|TPT1:NM_001014388:26_cdna Constitutive 1 NULL GeneID:326599 12 GENE TPT1 MGC128232 TCTP tumor protein, translationally-controlled 1 EMBV3_15646 GACATGCATTCTTAAAAGAGGTGCTTTCCTGTGATGTAGGCGTGAGGTGGTGCCAGTGAG Gene GeneID:789618|CDC42SE2:NM_001102537:78_cdna UTR3_Alt 3 NULL GeneID:789618 7 GENE CDC42SE2 MGC166112 CDC42 small effector 2 EMBV3_12165 TTCTGTCTTCTCCATCCCTCATTCTTGGCGGGACATGTAGCCCTGTAGTCTTGGTCCTGA Gene GeneID:100296008|USP54:XM_002698878:494_cdna Constitutive 0 NULL GeneID:100296008 28 GENE USP54 NULL ubiquitin specific peptidase 54 EMBV3_42559 AACTGGACGGAGGACATGGAAGGAGGCATCTCATCCCCAGTGAAGAAAACAGAGATGGAC Gene GeneID:553098|NFIC:NM_001024574:66_cdna Constitutive 0 NULL GeneID:553098 7 GENE NFIC MGC137374 nuclear factor I/C (CCAAT-binding transcription factor) EMBV3_08127 AGGCTGTGACCAACGGGCTGCGGGATGGACTCGTTTTTGTCCTTAAATGCTTGGACTTCA Gene GeneID:513056|VANGL1:XM_002686102:100_cdna Constitutive 1 NULL GeneID:513056 3 GENE VANGL1 NULL vang-like 1 (van gogh, Drosophila) EMBV3_16110 CAGCCCAGATTGATCTGACTGCATTTTCCTCACACCTCTACTTTCAAAGTCATTTAGCTG Gene GeneID:540660|CDC27:NM_001105428:281_cdna UTR3_Alt 2 NULL GeneID:540660 19 GENE CDC27 NULL cell division cycle 27 homolog (S. cerevisiae) EMBV3_39250 TTCAACGAGACTGTACTCACTGTGTGGTCGGCACCCAACTACTGCTACCGCTGTGGGAAT Gene GeneID:540398|PPP4C:NM_001099108:374_cdna Constitutive 0 NULL GeneID:540398 25 GENE PPP4C MGC166039 protein phosphatase 4 (formerly X), catalytic subunit EMBV3_04350 TACTGCCTGCGTATGGGGCAGGGAGGAGCATTTCACAGAATGTGCACTCATTGACAGTGG Gene BVV0101_038076 + 0 NULL GK000001.2:56380370-56722580 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26003 GTGGTGAGAAACCATATGAATGTAAGGTATGTGAGAAGGCTTTTAGACACAGTTCAGCCC Gene GeneID:510501|ZNF529:XM_002694950:78_cdna Constitutive 0 NULL GeneID:510501 18 GENE ZNF529 NULL zinc finger protein 529 EMBV3_11585 AGCAAGTACAGATGGCAGCGACTCATATAGCCCGTAAAGCTGTGGAGCTGGATTTGGTTC Gene GeneID:513231|GTF2B:NM_001046142:135_cdna Constitutive 2 NULL GeneID:513231 3 GENE GTF2B MGC137096 general transcription factor IIB EMBV3_29193 GCTGTCGAGAACAAACCCTCCTACTCAGAAACCACCCACCATTGGACCAGTTGCCGATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38033 GCATCCCTGAAGTACCACATGACCAAGCACAAGGCTGAGACAGAGCTGGACTTTGCCTGT Gene GeneID:513761|ZNF276:XM_002694768:548_cdna Constitutive 0 NULL GeneID:513761 18 GENE ZNF276 NULL zinc finger protein 276 EMBV3_35183 GAGCTGCTGCGTGGTCATGGACATAGGCGCCGATGAGTTTGAGCAGAGCCTCCCTCTGCT Gene BVV0102_453944 + 1 EMBV3_18260 GK000001.2:154103516-154150027 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236439 TCONS_00012073 2 XLOC_144464 XLOC_007623 Coding TCONS_00236439 XLOC_144464 Coding Coding PNLDC1 9:97502863-97529358 j TSS176992 6520 1 TCONS_00236439_1 531 0.223312883435583 19 0.754623688382275 0.00526022548463443 0.00262919349482457 0.00425404505247307 0.00242092469597848 0.00374113091831004 0.00215785315504813 0.00210969939943417 0.00270274167270187 0.00464627643260786 1.51715167391263e-05 8.75842045143344e-06 1.2976657974615e-09 0.000682421779004731 0.000328715213211068 0.000654637615520622 1.24429793570814e-07 6.33524798062346e-16 8.22587997056894e-09 0.00423555088511838 0.00535941820752846 0.0013713419092622 2.4526324936127e-06 8.76000033664616e-10 6.49917325735696e-09 0.00467695644518262 0.00400932681061151 0.00259560871116726 2.52759870742587e-09 1.80280293028534e-10 2.97802319663725e-05 XM_002690375.2 PNLDC1 PREDICTED: Bos taurus poly(A)-specific ribonuclease (PARN)-like domain containing 1 (PNLDC1), transcript variant X1, mRNA. 0.0 3196 100.00 0.271625766871166 NM_001271862.1 PNLDC1 Homo sapiens poly(A)-specific ribonuclease (PARN)-like domain containing 1 (PNLDC1), transcript variant 1, mRNA. 0.0 1893 85.52 0.252914110429448 TCONS_00236439_1 sp|Q8NA58|PNDC1_HUMAN PNDC1_HUMAN Poly(A)-specific ribonuclease PARN-like domain-containing protein 1; 0.0 943 86.35 0.964218455743879 1 coding 0 0 0 0 -1.13196852092808 0.0115975964168086 -0.0611533299858141 0.24682174464777 AGCCCTTTAAGGCGCCGGCGCGGCGCTTGCGTGTAAGTGCGAGGCGACGCGTGGCCGCACTCACTGGGCGCCCTCCGCCGAGCTGCTGCGTGGCCATGGACATAGGCGCCGATGAGTTTGAGCAGAGCCTCCCTCTGCTGCAGGAGCTCGTCCTGGGTGCGGACTTCGTGGGTCTGGACATAGAGTTCACGGGCCTTCGTTCTAACCTGTCTGGGCCCCAGCAGATCAGTCTGTTTGACTTGCCATCAGAGTGGTATCTAAAGACCCGTCAGAGTGTTCAGCAGTTCACCATCTGTCAGATCGGATTGTCTGTGTTCTCCAGTATTGAAGGCGAGTCGAACAAGTATGTAGCTCATTCATGTAACTTCTTCCTCTTCCCTACGACATTTGGGGTTTTGGACTCAGAGTTCTCTTTCCAGGCTTCCAGTGTTCAGTTTTTGAACCAGTATGGCTTCGACTATAACAAGTTTCTCAAAAATGGGATCCCCTATATGAACGAAGAACAGGAGAAGAAAATTAAGCACAACATTCTGACTGGGAACTGGAAAGTTCGCAGCTCTCTGGACAAAGACCAGATCAAGGTGGTGATTGACGAGGTGACGCGCTGGCTGGACCTGGCGGAGGAAGGGGACTGGATGACCCTCCCTGGTATTGCTGGCTTCCAGGCCTTCGAGGTCCAGCTCGTACTGAGGAAGGCCCTCCCTGACATCTGGACGGTGCTGAGAGACCAAGGGGTGATTGTGAAGAAGGTGAGTACGCAGCACCGCTGGTATCTTGAGACCACCTCCTGTGATCGAGAGAGCTGCTGGAAGGAGAAGATTCTTCTCTCTGCAAGGGGCTTTTCTGTGTTTTTCCAGATGCTGGTGAAAGCCCGGAAGCCCTTAGTGGGACATAACATGATGATGGATCTGCTGCATCTCCATGAGAAGTTCTTCAGACCTCTCCCAGAAAGCTACGATGAGTTTAAGCTGAATATCCACAACCTATTTCCTGTTCTCATTGACACCAAGAATGTGACAAAGGATATCTGGAAGGAACTCAATTTCCCAAGGGTTTCAAATCTCTCAGAAGTTTATGAAGTCCTGAACAGTGACTTGAACCCCACCAAGAACTCTGGGCCAGTGATCATTCACGCCAGCAGGTGTGAGAAGTACGTGGAGACCAAGTACCCCCACGAAGCGGCATACGACGCCTTCCTGTGCGGGTCAGTTCTGTTGAAAGTGGCGCACCTGCTCCTGTGGAAGGTACACAGCGCTGTTCCCATCCCCGAGCCCAGCTTCCCGCTCTACCTGGACGTGCTGGCTCCCTACGTGAACCAGGTGAATCTTATCCGAGCCGGGGTCCCCAAAATCAACTTTGCGGGCCCAGACTCCCCTAGCATCCGCCCCCCCATCCTCATCCTCACCGTCAGGAAGTGGCCTGGGGTCAGCGAGCAGCAGGTCTACCGCGAGTTTCAGAACCTCTGCAAATTTGACGTCAGGAGGCTCACGCGGAGCCAGTTCCTGCTCATGACCAATAAGTTCAAGGACACGCGGAGCATCCTGAAGGAGTACAGGTGCCACCCGACACTGCGGATCTCCCTGTACCGCTACTGGAGACACTCCCCGGACATCAACTGCCTGCTGCAAGTCTGCAGCGTCATTACCACCTGGGCCTTCATTGCGTTTCTCCTGGGAGGAGCTGGCCTGTGAGGGCAGCGAGGCCGCCTGCAGCTCCGTCCTGTCTGCACGCGACCCCCGTAGGGCTGTTTGCCTCACATCCTCCGTGCAAGTGGATCGGTACTGTCCCCACAGGGAACTGTGTTCTGGTTTCAACGTGAAAAAGTCTGTAAATATTATCACCGATAAGTCCTTTGTTTGTGGCCCAAACGTTTCTTTCTATAAATGACTGAGGAGAAGTAACGTCTCCTGGGCGTTTAAGCTCACGTTCCAGAGCATCTTCTGAACGGACAGCTAGGCATCCAGCGGAGCTGGCCACTGAGCGAGCCAAAGGCTCTGTTATTTCTGGCAGAGAAATCATTAGCCAATCGGTTGACAGGGATTTAGGCCTTAGAAATGGCCTACGTTTTAGTAAAGGGGAAAAGTAAAGCCAAGTGTCCATGTGCACAGGTGTTGATCTGTTTTTATTTATTTTGGGGTTTCTCTTTGGGGTTTTTTGGTTTGTTTGTTTTCTGGGTCAAAAATAGTTTTTACTGAGGAGAAAAGACTCCAGCCTACAAATGTGCTACTTGTAGTTAAAATTTTATATGTTTAAGTTGTAGAATATAGTATTTCATAGGTTAGAACAGAGAACAGTTAATATCAGAATCATGGAAAATGCCATGCAGAACAAGTAAATAGGACATCGTATTGTTAGGTTTGTGTAGCTCAACTCTAGTGAGTGTAAAGGTAGGTTGATTTTCCTTATTCATCTGTTCACTGATTCAGCAAATATTTACTGAACTTCTATGATGCCTAAGATGTTAGAACGTGTCTTTTGGATGTTTATGGTAATAGTCATTTAGTTTTTGTTTTTTAATTAGGTTGCCATTTATAAAATCATACACGGCCCCTGATGTTTTGCTAAGAAGCTTCCCCTCGGATAAATAGGGGTAGAGCAGACTATGGTTTTATGGTCCATGTTTGAGATAAACATTATAAACCATAAAGCATTAATACTCACTTTGGAAACAAAGTGACCTGTAGCACAGGTGTGTGCCCCGAAACAGGTAGGATCAGATTCTTTTCTTTCCTCAGCAGTGACGTGCACGTCACTTGGCCTTATCGGGAGCTGTTCTCTGTTGGGGGTTGAACTTGGCTGGGCTGTGTGCTCAGCCTTGAACTTGACTTCATTATTCAGCAAAGCCTTGAGCTCTGTGCAAAAGAGGTTTTTTCCTCTGTAAAAGCAGAAGTGTTAAGAGATGGCAGTCACCCAGAAGAAGAGTTTGGAAGCTGCCATTCTGGAACTCCCCTGTCGTCCTGGGGTGTGAGTGACACGCTGACTGATGGGCTGCTGTCCCTACAGCCTTCCGGGCAGCTCTTGTGTTCAGACCAGTGAAAGGCTTCCCTTGGTCGGGGGAAGGGGGCTTTGTCCATCTGTCCACACAGCGTCTTAGGGGAATTTTTTTCTTTTTTTAATTTATTTGGCCGCACCAGGTCTTAACTGTGGCATGCAGGGAGTCTTAGTTGGCAGCATGTGGGATATCGTTCTCTGACCAGGGATCGAACCCAGGCACCCTGCATTGATAGCACTGAGTCTTAGCCACTGGACCACCATGGAACTCCTGGGGGATTTTGTTTTGTTTTTGTCTTCCTATTGGGTATTCCTTTGTGTATGCTGTGGAAAATTCCCACTGTTTATGGGCTTTTGGGACCCTGTCTCATGGATGTGAGCCATGCAGTCAGTAGGCAAACCTGGGAAGTGAAAACAGATTTCTCAGCTGAGCCTGTGCAGTGGCCATGTTGACCTCCTGGTGTCAGGGCGCTGAGCGCTAAGCTGTCTTAGTTCTGGAGCAAGAGACCCTGTAGTTGTTTTATCAGATGTTACCCATTTGCTCTTTAACTCTTTGTCTCTTCATAAGTTGTTGCGGAGTCCGTGCTAAGGGTGCCCTCACCAGGGCCTCTGTGCTGCAGTCAGCGTCCTGCTGTCCATCCGTCCGTGGGGACCCCGGCTGGCTGCATGGTCTGCTTTCCCTCCTGGAGGAGGCTTTGGTGGTGGGATCTGAGCTGCTCAACCCATGACCTCGATCTGCTTCTGTTTATTAACTTCCCTGAGGATTCTCCACGGGTGCCGCGCTGGAGGTGCCGAGTCCAGGAAGCGCCGTGCTTGTACCACCTCCCACCCTGTGTCCCCAGACAGAGCCTCGGGGGCTTGGGGGGCAGCTCTGGGGCTCCTGCCCCCGCTCTCTCCTCAGCTCAGCTAGTTCTTCACGTCGGTGCATCTTGTGCCGTGCCTTCCCCGTCATCAAAGGAAAGAACCAAAGTGAGAAACAGATAAAGCAGACTCTCCCCTCCAGTCTGTGTGTACATGAGTGTGTGTGTCTCACGTCTTCCATTGTTTCCCTGTCTTGGCTGCGGTGAATAATGCTGCAGGAAACGGTGGGTGTGCATATCTCTCTTTGATAGTTTGTTTTCATTTCCTTTGGATATATACCCAGAGGTGGGACTGCTGGATCATATGGTAGTTTCATTTTTAATTTTTTGAGAAACCTCGATGTCGTCCTCCATAGTGACTGAACCAGTTTACAGTCCCACCAGTCGTGCACATGGGTTGCCTTTTCCCCACAGCTTTGCCAGTACTCAACTTGCAACCTGTCGTCGTCTTGATAATAGCCATTCTTACAGATGTGAGTTTATCTCATTGTCTCATTGTGGGTTTGTTTGTTTGATTTTTTTTTTTTTTGGCTGTGCCACTGGCTTGTAGGGTCTTAGTTCACTGATCAGGGATTGAACCCAGGCCCTGGCGGTGAAAGCGCCAAGTCCTGAATCCCAACCCCTGGACTGACAAGGGGATTCTCTCATTGTGGGTGGTTTTGATTTGCATTTCTCTGACATGGCTCAGTGGTGAAGAACCCACCTGCCATGCAGAAGGTGTAGGTTCACCCCTGGGTTAGGAAAATCCTCTGGAGAAGGAAATAGCAACCCACTCCCAGTATTCTTGCCTAGGAAATCCTGTGGCCAGAAGACAGAGGTGGGCCACAGTCCACGGGGTCGCAGAGGAGTCCGTCACAACTTGGCGCCTCAGCAACAACAAACAGCAACAATTAGTGACGCTGAGCACCTCTCATGTACCTGTTGGTCATTTGAACGTCTTCATTGGAAAAATGTCTATTTGGTTTCTCTGCCTGTTTTAAAATTGGACTGTTTGTTTTTTTCTTCATTGAATTATGTCAGTTCTTTATATACTTTGGGGTGTTAACCCCTTATCTGATACAGATTTCCCCCACTCTCTGAAAGCAGAGCTTTCCTGTGAAACCTTCTGAAAGCCCCAGTGGAGCAAAGTGAAGAAGCAGTTACCTGAGGACACATGTTGCTTGTAAAATGTCCAGATGGATGGGGATAAAGCACAGATGCTCAGAGACAGTGAGGACCATAGAGTGGGGTGCCAAGGTGCTAGAGTGTAGCTCCTGGGGAAGGAGCCTGGTAACGCCAGTCTTGCTCTTGAGGTGACGCTGCCCCTAGGACGTCTTGCTGCAAAACAAATACTGAACACTGTCTCTGCTTTTTATCTTTTTCCATAAAAATGAAAAACTTGATTCCTTTCAGCTAGGAATATCAGGTACTAATGTAGGCCTTTTGAAAAAGCAAAGTGGCTTAAAACCAAAAGTGGGGGAGATCTCTCCATGGTTGTGCAGCTCTTTCTCCCATTCTGCAGGCTGCCTTTTTGTTGTGTTGATTGTCCATTTTGCAGCGCAGAAACGTTTAAATGTGATGTAGTCCCACGTGTTAATTTTTTTTTTTCCTCTTTGTGCTTTTGGTGTCATATCCTAAAATCATTGCCAAGAGCAATGTTGAGAGGCTTCCTCCTTATATTTTTCTCCTAGGAATTTGATAGTTTCAGGTCTTAGGTTTAAGTCTGAGCCCCTTCGAGTTACTTTTTGTGTGTGGTGTAAGATAAGGGGTTCATTTCATTTTTCTACTGTATTCAGTTTTCCTAACACCTTTTGTTGAGACAACCCCTTCCTCATTATATGTTCTTGGCTCCCTTAAGAAATATTAGTTGACCATATTATAAGATCTTAATTTTATCTTTATCATTCATTATAAGAACTCATGCAAGTCCTCTAGAATGTTTTATGTAATTAAGAAGGGTAAGGAACTTTCCTGGCAGTACAGTGGTTGAAACTGTGCATCTGCTGCAGGGGGCCCAGGTTCGATCCCTGATCAGAGCACTAAGATCCCGCATGGCCCCAAAAAAGGGGGAAAAAAACAAAGTAGTGAATATTTATGGATGGACATTTCTTACAATTTCGTGTCTATAGGACTTCACTGGGTACCCCCCCTTCTCCTTGCAACAATGTAACTGCTGTGGAAACAGGACGATATTAATATTCTTACAGATCAGAGCAGACAGGGGTCCCATGAGAACTGGGGATGAGAAGGCAGGGGACTAATGTACAACCAGAACTGTGGGCTTATTTGGCCACGTAGAGTCTTATTTACCTGAAGACCTGAAAACTCCACTTTCCACTCGTGGAAGAAATGAGCTAGTCTTACCTTTAAGATCGCCACATGCTAGTTTTGATCCAGATACTCTGCTTTTGTGTCTTCCAATAAATACAATGTGTGAAATTTCTAATCTGTTTTGTGCAGTATTTTGTTTAAGTCCTCTAGCATCCACATTTGCCTTGAAGATCATTCTGAACTTTTTGGTTGTTGCTGGTGTCAGCGCTCTGATCTCTACTTGACCTTTGGAACAAGTTCAAGGGCAGAGACCCACAAAGCTGAAGGAGTGGTGTGGGTGATGGCTAAATATTGTGACGTTATCTTGGGCAGAAAACAAAGGAATGTCATTAAAATCCCTTTGAGTGCTGCCTCGTAGA EMBV3_04803 TGCAAAAAAGAAGAGAGTCTTCCAAAGGAAGTGGTACTTGTAGACCTTCTGAGATGAAGC Gene GeneID:504453|DMGDH:XM_002690457:343_cdna Constitutive 0 NULL GeneID:504453 10 GENE DMGDH NULL dimethylglycine dehydrogenase EMBV3_43528 ACCTCGCCGAAGATGTCAGGAGCCCAAAATGTTGAGTAGCCCTGAGGACACCATGTACTA Gene GeneID:536123|MYO3B:XM_002707802:129_cdna Constitutive 0 NULL GeneID:536123 2 GENE MYO3B NULL myosin IIIB EMBV3_22822 AACTGTTCTCTTTGCATACCAGCGTCTCAGCGTCTTAACTTGCCTCCTACGTGTGCAGGG Gene BVT0102_234941 + 0 NULL GK000023.2:9782893-9834530 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41166 GGTATCCATTAGCTGGGACTCACTTAGAACAAAGTACCTGGCATTGAAGGCTCCCAGACC Gene BVT0101_033676 + 0 NULL GK000013.2:27031642-27056506 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044849 1 XLOC_026292 Coding TCONS_00044849 XLOC_026292 Coding Coding FZD8 13:27054119-27058756 = TSS32878 4256 1 TCONS_00044849_1 622 3 0.0826143226919759 0.000634037035633808 0.00113918403898383 0.000839295107950139 0.000732661846041814 0.000292913575790455 0.000160530536822637 0.000212386028056405 0.000393294646583129 0.0002338207989601 0.000272623852140261 0.00142724654560611 0.000236082674823665 0.000227365027343336 0.000351473512800616 7.49169031865674e-05 0.00119149980378307 0.000475912652650956 0.000415892953605511 0.000874462456317863 0.000234871345399175 0.000366678039552756 5.2307447371919e-06 0.000204777887926147 0.000417538754646581 0.000656253875150406 0.000807844835634895 0.000407496928765855 0.000286620722534734 3.4029378610618e-05 0.000419557524042326 XM_005214320.1 FZD8 PREDICTED: Bos taurus frizzled family receptor 8 (FZD8), mRNA. 0.0 4760 99.04 0.633223684210526 NM_031866.2 FZD8 Homo sapiens frizzled family receptor 8 (FZD8), mRNA. 0.0 2098 85.70 0.425516917293233 TCONS_00044849_1 sp|Q61091|FZD8_MOUSE FZD8_MOUSE Frizzled-8; 5e-125 389 90.52 0.371382636655949 2 coding 0 0 0 0 -0.130772415176208 0.261786656616881 0.00955239021772403 0.837772810250375 ATGAGCCGGCCGGGGCGTAGCTGGGCCGGAGCGGGAAGTTGGCGAGGGACACTGCTCCCGCCGAGGAGGTGGCGGCGGCGGCGGCGGTGGCGGGGCGCGGGCGCGCCGCTCAGGTGTCTGCTCCGCCTTCCGGCCTGGATTTGCCTCCGTGAGTTCAGCGAGAAGGGGACCATCGACACCTCGCCCCAGTGCCGGCCGGAGCGCGACTTCCACCGGAGGCGGGGCCCGTCATCCCGGCTGCTGACCGACGGACGGACGCCGGGGACTGAGGGCCGTGGCCTCCGTGGAGAGCGGCCTGGCCCAGCCATCTTGACTGCGCACCGCGGCCCGAGAAGAAACTTGCTGCGCCGCCGCCCTCAGTGCCCGGCAGAGTCACCGGCGCGCGCGGAGAAAGCGACCGAGGGAGGGAGAGATGAGCTGGGGGCCGGCCACTCTGTCCCGCGAGGGCTGAGCCCGGCGGGAGTGAGCGGGGCAGACCCTGGGACCACGGTGCCCTTCGGCGGCCACCCTCGTCTCCCGCAGCTCCGAGAGGACGCATCCCGAGAAGGGACTAGGCTATTGGCAGAACCCCTCCCGAGAGAGGCAGGAGAGAGCCCGGCGCTCTCGCAGGAGCCCCTGGCGCCCCTCCGCGCGCCGCCCGGAGGGCGAAGGCGTGGGGCCGAGGCGCGCAGCATGGAGTGGGGTTACCTGTTGGAAGTGACCTCTTTGCTGGCCGCCCTGGCGCTGCTGCAGCGCTCGAGCGGTGCGGCGGCCGCCTCAGCCAAGGAACTGGCGTGCCAGGAGATCACCGTGCCGCTGTGCAAGGGCATCGGCTACAACTACACCTATATGCCCAACCAGTTCAACCACGACACGCAGGACGAGGCGGGCCTGGAGGTGCACCAGTTCTGGCCGCTGGTGGAGATCCAGTGCTCGCCCGACCTCAAGTTCTTCCTGTGCAGCATGTACACGCCCATCTGCCTAGAGGACTACAAGAAGCCCCTGCCTCCCTGCCGCTCGGTGTGCGAGCGCGCCAAGGCCGGCTGCGCGCCCCTCATGCGCCAGTACGGCTTCGCCTGGCCCGACCGCATGCGCTGCGACCGGCTGCCCGAGCAGGGCAACCCCGACACGCTGTGCATGGACTACAACCGCACCGACCTCACCACGNNNNNNNNNNNNNNNNNNNNNNNNGCGCTCAGCTCGGTGGACGGCGACCCGGTGGCAGGCATCTGCTACGTAGGCAACCAGAGCCTGGACAACTTGCTCGGCTTCGTGCTGGCGCCGCTGGTCATCTACCTCTTCATCGGCACCATGTTCCTGCTGGCCGGCTTCGTGTCGCTCTTCCGCATCCGCTCGGTCATCAAGCAGCAAGGTGGCCCCACCAAGACGCACAAGCTGGAGAAGCTCATGATCCGCCTGGGCCTCTTCACCGTGCTCTACACCGTGCCCGCCGCCGTTGTGGTCGCCTGCCTCTTCTACGAGCAGCACAACCGCCCGCGCTGGGAGGCCACGCACAACTGCCCGTGCCTGCGGGATCTACAGCCCGACCAGGCGCGCCGGCCCGACTACGCGGTCTTCATGCTCAAGTACTTCATGTGCCTGGTAGTGGGCATCACCTCGGGCGTGTGGGTCTGGTCCGGCAAGACGCTCGAGTCGTGGCGCGCGCTGTGCACCCGCTGCTGCTGGGCCAGCAAGGGCGCGGGCGCGGCGGGCGCGGGCGCGGCGGGCGGCGGCCCGGGGGGCGGGGGGCCGGGGGCCGGCGGGGGCGGGGGACCGGGGGCCGGCGGGGCGGGCTCCCTCTACAGCGACGTCAGCACCGGCCTGACGTGGCGATCTGGCACGGCCAGCTCGGTGTCTTATCCAAAGCAGATGCCATTGTCCCAGGTCTGAGCGGAGGGGAGGGTGCGCCTGCGAGGTGTGGGGAGGGGGCGATTAAGACAGAGTGCTGCGGGGGGTGGGGGGCTGGGAGGAGGTTAACTCGAAGGCAGAGGTTTCCACCCCTTCACCGTGTTGATTGCTATTAGCATCATAATGAACTCTTAATGGTATCCATTAGCTGGGACTCACTTAGAACAAAGTACCTGGCATTGAAGGCTCCCAGACCCACCCCCCTTTCCTCTACCGACGGGCGAGGAGTTTCTCCCGCCAGGCGTTCATTTCTGTTGGCAGGGCAGAGGAGGGTGAGCCCCGCGGCTGCGTTTCCGAGACCCAAGGTTTGGAGCCCTCGCTGGTTGCCATTTGCTGAGCTTGAAGCCAGACCTACAGATTTCACCTGAGGGACCTAAGTTTTCTCCCTCGACTCTGCTACGTAAACTCTTACTCCTAACACGTCCTAGATCTAGGCGGGATGAGCGCGACCTAACGGGATCGCACGGTTTGGGTATTCTTAATGACCAGGCAAATGCCTTAAGTAAACAAACAAGAAATGTCTTAATTATACACCCCAAGTAAATACGGGTTTCTTACATTAGAGGATGTATTTATAAATATAATTATTTGTTAAATTGTAAAAATGTGTAAAATATGTACATACCCAAAGATATACAGTCTGTACATTTTCTGTAAAAAGTTTAGAGGCCACCCCTGTAAGAACAAATATAAGTATTCTATTTTGTCAATAAAATGACTTTTGATAAATGACTTAACCGTCGCCCTCTCCCCCTGCCTCTCCTAGACTGTTACCTTGAACGTGCTTGTGGAGGGCCCCTCCGGAACAGGGACGTTTTCTGGTTTCTCATTATGTACACTGACCTTAGGCATGAAGAAAAATGACCTGTTAAACTCGAGTTCCTAAGTTGTTAGCAGAGTAAATATCACTGTTAAACTGAAATCAAAATTGAGGTTTTTGCACCTTTCCGAAAAGATGGTGTTTTTAATGATAGCTGTTTTCTGATCCATGGATACCACTCACCTTAGTCGATGTAAATGGAACTTTTGCAAGGCACAATTCCACTCTGGCCTTGTTATTTATCTTGTATAATATCACTAAAGGCTTCAAACCCCACACTCATTTCTCGAGTCGTCCGTGATTTTGAAAGCACCTGCTCCTCCAGGACCTAACACACTGCTGAAGGGTAGAGGTTAATGTTTTCAGCCATCGATCACACTGTACAGTGTAAGTCACTCGACAATCCGGTGGTGGAACAGGCGCTCTTTAATGGATTAAACTAACGGGTTAACATCTTAATAACCTTCCAGGCTTGTGTATATCAAATGTGCTTCTTTTCCTAGAGAAAAAAGCTATTGTTCCTCTGTCAAGACTAAGCTAATTTATTTGAGCAGAAGGCTGTTGAATTAGCAGAAGAATGCTTTGGCAATTGTTGAACTTTTTACCTGTCTGCCCAGTGGCTCAGCACATCATTCCTTTAAGAGGAGCCAAATGAATAGGGTTAATCTGTAGGGAACTTGGTCCTTTGAGTTGGAAAAACTTTGATCTTTTCTCCTCTCCAAATGTGCTGTATAGTCTGAAGTTTCTTTCCCTGCGGCCGGCTCCTCTTCGTGCAGACCAATTGGCCACCGCGGAGCCTTAAAGTTCTTCCATGAAAGGGATGTGGGACTTTTACTTTAAAAAGGAGAGAGAGCCAGGGAGAGGAAGACTTGTAACAGTTAGTGAAGACCAGAGGCACAAGTGCCCGCAGCCTTTTAAACAGCTTTTCCCGGCATTGTTAGCCAGCCTGCAGGCAGCTAGGCATGAGTTGAAGCTTTATAGAAAAGGGTTCTGAATGCCCTACAGGTGGTCTGTGCACATAATCCCCCAATTTCAAGCGTTTTCCTTTGCTGGACAATTGCATTACAAAACTCCCTTCTTTTTCGCTCCTAATTGAACCAATGAACTATTATAAACTACAAGTTTTTCTTAAAAAAAAAAAAAAAAAACCTTCAGTGCCTAAATTCTATTGACTGAATTCTGGCAAGTTTTCTGAACCGAACCTTTTCAAACACCGGAAGTAAATGCTTCTTCAACTGACATTTCTCTTTTTCAGATATTTTTATTCCCCATGCTTGTTATTTTCTGACAGATTAGCAATAATTTAAAAGTAATTGGTAAGGTTGTGTGTTCCTGCTGAAAAGATAGCCCCAGGACCCTTATTAACCTGTCAATCAAGATAAGAAATGGGCAGCTACCCTGCTAATGATGGGGGGCATCAAACGTTGTGGGGTGGGTGGGGACTTCTGCAGCCTGCAAAGAAGTTTGTTCTCTTTTTCCTAATAGGAATATTTAGTGGCTTGAAATTTTTTCTTTTAATGAATAGGATGGAAACCTCTTTGACTGATCC EMBV3_03869 ATTTGGTGGTGACAGGGGCGGTTGATTGTAGTTTGAGAGGCTGGGACTTGAGGAATGTAC Gene GeneID:533077|PEX7:NM_001076890:29_cdna UTR3_Alt 3 NULL GeneID:533077 9 GENE PEX7 MGC143449 peroxisomal biogenesis factor 7 EMBV3_39695 TAGTGCTGCAGGTGGCACACGGTTGTCCGGAGCTCCGCAGCCTTTTTCTAGATAACAGAA Gene GeneID:614765|FBXL8:NM_001076937:424_cdna Constitutive 0 NULL GeneID:614765 18 GENE FBXL8 MGC142707 F-box and leucine-rich repeat protein 8 EMBV3_25801 GTGGTGGAGAACGTTGCAAACACCGATACCCTAGATACACAGAGAGAAGACCCCCCAGAG Gene GeneID:614787|FAM129A:XM_002694247:211_cdna Constitutive 0 NULL GeneID:614787 16 GENE FAM129A NULL family with sequence similarity 129, member A EMBV3_27446 TGCACATTCTCATTTCTAACAACCCATGGAAGACCACACTTCGAGAACCACTGAGGTGTT Gene BVV0101_003070 + 0 NULL GK000009.2:15587699-15602799 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234769 TCONS_00234785 TCONS_00234764 TCONS_00234766 TCONS_00234770 TCONS_00234768 TCONS_00234786 TCONS_00234765 TCONS_00234783 TCONS_00234775 TCONS_00234772 TCONS_00234782 TCONS_00234779 TCONS_00234774 TCONS_00234780 TCONS_00234777 TCONS_00234773 TCONS_00234778 TCONS_00234771 TCONS_00234767 TCONS_00234776 1 XLOC_144098 Coding TCONS_00234773 XLOC_144098 Coding Coding SENP6 9:15453584-15592158 j TSS176185 9808 1 TCONS_00234773_7 596 0.115415986949429 22 0.929380182286593 3.31388064054859e-26 1.4492578846311e-08 3.0696208157341e-40 1.28910863606841e-14 2.44944619731355e-06 1.68293033649268e-06 1.51959848969479e-05 8.18605948069197e-06 2.34311563729153e-13 2.49467205920687e-05 1.96247020305575e-05 2.73051490003919e-05 3.21996593308636e-06 8.49703068337986e-06 7.17934119579894e-13 0.000266782090272223 1.5226988753412e-05 0.000407936379666167 1.57332844954238e-09 8.9215139299481e-05 1.23793543726826e-13 0.000110996558945649 3.18930924570465e-05 0.000129907093073572 0.000158322344672213 0.000115690671906749 2.14820121748536e-08 1.25244959092868e-05 2.71670856954693e-05 2.76732801147277e-11 NM_001192790.2 SENP6 Bos taurus SUMO1/sentrin specific peptidase 6 (SENP6), mRNA. 0.0 6881 99.92 0.38968189233279 NM_015571.2 SENP6 Homo sapiens SUMO1/sentrin specific peptidase 6 (SENP6), transcript 0.0 4778 82.91 0.464110929853181 TCONS_00234773_7 sp|Q9GZR1|SENP6_HUMAN SENP6_HUMAN Sentrin-specific protease 6; 0.0 1063 89.60 0.998322147651007 1 coding 0 0 0 0 0.0462441493401113 0.69112900377671 -0.0176276964368977 0.743062150445756 GCTTTTGTGTAGGCCCGTCCGGACGAGGCAGCGTCGCCCGCCTCACGGCCGAGTCCTAGGCCCGCAACCCTGCGGCGGCTACCCTCTTGCGGCGCGGCCCCTCATCCTGGCGAACGCGGCGGCGGCGGCGGCGGCGGTGTGGGCCATGGATTAAGGCGGCGGCGGCGGCGGCGTGGGAGGAGGAAGATGGCGGCTGGCAAGAGCGACGGCAGCGCCGGGGAGATTACTTTTCTGGAAGCTTTGGCTAGATCAGAATCTAAAAGAGATGGAGGTTTTAAAAATAATTGGAGCTTTGATCATGGAGAAGAAAGTGAAGGAGATACAGATAAAGATGAGGCAAATCTACTCAGTGTAGATGAAGATGAGGATTCTGAAACCTCAAAAGGAAAAAAGTTAAATCGTCAATCTGAAATTGTTGCTACTAGTTCTGTTGATCCCTGGAAGACATGTGCAAGACGAAACAAGACCGAAAGTTTAAAACCTTTGAAAGGCAACGCAATTGGACTTAACATGTTGAGCAACAATAAGAAATTGAGTGAAAATACACAAAATACATCATTATGCTCTGGAAGTGTAAGACGTTTTCCTCATGCTAATGCACAGATAGCAATAGTAAAAACAGCAGCCCAAAGGAAAGAATACCCACCTCATGTCCAAAAATTTGAAAGTAACCCTGTAAGGTTAAGTCGGCCCCAAGGTGTTGATCAAAAAGAAACTTATTTCTGATCCTCAGGGAAGAACTACACAATAGATCGTATAATGAAAAAAACAGAAGAGTCTGAATCACACCTGGAGTCTGAAATTAAAAGGAAAGTTGCACAGAAACGTCACAGTAGTACATATCAGTCTACCCCACCTTCTCTGTCTCCTGCTTCCAAAAAATGTTTAACTGATTTAGAGGTTTCTAAACAGTGTGAATTTTGTCCAAAATGTGGGAAAGAAAAAGAAAATCAGACCAAATGCCAAAGTTGTGGTATTCCTTTTTCTAAGGATTTGCAGAGAAATTGCAGACAAGCTATAACTTTGAATGACTCTGCTGGATTATCATTAAGAACATCAATTCATCAGAATTCTGGAGGACAGAAGTCACAAAACACAATATTACCAGCCAAGAAGTTTTATGGCAACAGTGTGGGAAAGATTCCAATTGATATTATTGTGAGTTGTGATGAGAGTGGACAGAATTATTTACATACTAATGGGAAAGTCATTTTGTCTAGGGCAAAAGTAGCCAAAATCACAAACCTGAAAGAAAGGAAAACAAGCCTGTCAGACCTAAATGATCCAATCATTTTGTCCAGTGATGATGATGATGATGATGATGACAATGACAGGACTAACAGAAGAGAAAGCATCTCTCCTCAACCTGCTGATTCAGCATGTTCTTCCCCAGCACCATCCACGGGAAAAGTAGAAGCAGCACTAAATGAAAACACTTGTAGAATAGAGCATGAACTAAGAAGCATTCCAGCAGATTCAGAATTAAATACAGTTATATTGCCAAGAAAAGCAAGAATGAAAGACCAGAACCAGAAAATGATCCTGTAGGGATTACTTTAAATACCTCTGATCTAACAAAATGTGAATGGTGTAGTGTCCGAAAATTACCAGTAGTGTTTCTTCAGACTAAACCGGCAGTTTATCAGAAGCTGAGCATGCAACTGCAGATGAACATGGAGGATAAAGTTTGGAATGACTGTAAAGGAGTAAATAAGTTAACAAATTTGGAAGAACAATACATAATTCTAATTTTTCAAAATGGCCTTGATCCTCAGGCAAATATGCTATTTGAAAATATTATTACTGACATTGGTGTAAAGAATAATGTGTCAAATTTTTTTGTGAAAATTCCCTTTGATGAAGCCAATAGCAGACTTGTTGCCTGCACAAGAACCTATGAAGAGAGCATCAAAGGAAGTTGTGTGCAAAAAGAAAACAAAATTAAAAATGTGGCCCTTGAATCTAAAATACAACTTAAAAACAAACAAGAATTCCAGTTTTTTGATGATGAGGAAGAAACTGGAGAGAGCCATACCATCTTCATGGGTCCTGTAGAAAAATTGATAGTATATCCACCACCTCCAGCTAAGGGAGGCATCTCCGTTACTAATGAGGACCTGCATTGTCTAAGTGAAGGAGAATTTTTAAATGATGTTATTATAGACTTTTATTTGAAGTATTTGGTGCTTGAAAAATTGAAGAAAGAAGAAGCTGACCGAATTCATATATTCAGTTCTTTTTTCTATAAACGCCTTAATCAAAGGGAGAGGAGAAATCTTCATGAAACAACTAATCTATCAATACAGCAGAAGCGACATGGAAGAGTAAAAACATGGACCCGGCATGTAGATATTTTTGAGAAGGATTTTATTTTTGTACCCCTTAATGAAGCTGCACACTGGTTTTTGGCCGTTGTTTGTTTCCCTGGTTTGGAAAAACCAAAGTATGAACCTAATCCTCATTACCATGAAAATACAGTCACGCAAAAAAGCTCACCTGTAGAGGACAGTTGTATTTCTTCTCCTTCAGCCAGTGAAATTGACAGATGTTCACAAAACTCTGCTGCCAAGCCTGTAATTAAGAAGATGCTAAACAGAAAGCATTGCATAGCTGTAATTGATTCAAATAATGAACAGGAAGAAAGTGACCCTCGTTACCGGAGAAACATAAGCAGTGTGAAATGTAGTCTGAAAAAAATAAATCATACTGCAAGTGAAAATGAAGAATCGAATAAAGGAGAACCCACATGCCAGAAATTTGTTGATAGGACTGAAAGTGAGAATGGCCTACAGAATGAATATTTAAATTCTATGCACCATACAGATGGTTTAAGCAAAATAAGGCTAAACTACAGTGATGAATCAGCGGAAGGTAGTAAAATGCTTGAAGATGAACTCATCGACTTCTCAGAAGATCAGGATAACCAGGATGATAGCAGTGATGATGGACTCCTTGCTGATGACAGCTGCAGTTCAGAAATAGGACAGTGGCATTTAAAGCCTACTCTCTGTAAACAACCTTGTATCTTACTGATGGACTCACTCAGAGGCCCTTCTCGATCAAATGTTGTCAAAATTCTACGAGAGTATTTAGAGGTGGAATGGGAAGTTAAAAAAGGAAGCAAAAGAAGTTTTTCCAAAGATGTTATGAAAGGCTCTAATCCAAAAGTACCACAGCAAAACAACTTTAGTGACTGTGGCGTATATGTATTGCAGTATGTAGAGAGCTTTTTTGAGAATCCAATTCTCAATTTTGAATTACCTATGAATCTGGCAAACTGGTTTCCTCCCCCAAGAATGAGAACAAAAAGAGAAGAAATCCGAAACATAATTCTGAAGCTACAGGAAGATCAGAGCAAAGAGAAAAAGAAGCATAAGGACACTTACTCAACAGAAACGTCTTTAGGTGAAGGAGCAGAACAATATATCAATAGCATCTCAGACTGACCATTTCTGATGCTTCTGCGTATTGCCTTCAGAAACTGAGTGACTTTCAACTTTGGGTATAGACAGTAAAGAACTGAAATACTCACTACTCAGAGTGATTTGGAAATGTTAATGATTGTATAAATGTCATATAATTAATTTCCAATGGAGTATGTATTAAGTAAAAGTCTGTAAATATGTTAATGAGGCCAATTTTTCCAGCATTTATAATTATTTTTTTCACTTGTTAGGAAGCTTTTGTTATGTATTTTCTGTTAATAGTACTTAAAACTGCAACTTCTAAACACAAATAAATAAAAAGAAAATATTTATAGGAGGAAATGATTAATTTGATATTCTTTAGTGAAATTAAATTCTTCAGTGGGTGTGATATATTTCATGGGAATATTCGAGTATCTATGATGATCTTTTCACTTTTGCATTTGTTTTAAAATAAAACATAAAAATAAGATTAAATTGAAGGCATTTTGAACAAGAAAGACATCTTCATATGCTTGTATAGCAGGAAAAAATAACAGGTTTTTTTAACCCAGATACTTCCTTGTGTTTGGAGAACTTGGCCCCAAAAGTGTAATAAATATTGATAATTTTACTCAATTATTTAAGAAGAAGCAAGTCAAAGAAAAATAACTTGGAATTATACTACTACATAATAACTATGTCATATGTTATTGTGAAGTACCTTTTTGAAGATATCAAAACTCAGGTTAAAACTATTCTGGTAAGTACAGCTTGAATTTCAAGTATCCCATGTTACCTTCCTATATTAAAATATCTACAATCTGTGTGATATAGTTAATTGATAAACATTTTTAACCTGTGAACACAGAAATTTAAATAGGAATTTACTATTTTTTGTAATGACTTTTGCTATTTTTTCACTGCTCATTTTGTTCTTGTTATTTTGATATACAAAGTACCAGACTTTTTGCACCTGAGTTTTTTAGTGAAAATTATTTTTACATGTAAAAGTACTATCTTTAATCAGTTGCATACTGCAGAAAATAATAGTCTATCTTGAATTGCCCTTTAAAAACACTAAAATGTGGTGGTGTTGACACGTTTACAGTTCATGTAGGAATCTTGCATATATCTGCTGAAACTATTATTTTCAAATGAAATGTTACACATTCTTTCAAATTAACTTTGAGACTTGAAATTATATATTTGAAAAGTCATTTTTTTGTTAAATAATTTAAAAAGCACATATAACAAACATAGTTGAGAATAAAAGAAAGACCATTTTTAATCAGTAGTTACTTTATTTTTAATCTAGCCGTTTCTGGCATTGCAACCCACATTTTAGGCTACTTTATTGAATTTAACAAAGACCATGGATATGTTTGGGGTGGATTTGGGGTGTTGTTAACAACAACCAAAAAAAAAGAAAAAATCGGCTTTATACACACTCATTAAAGGAAAAATTAAAATGTTAAGTTTCAGGAACATCACCATTAGTGGTATTGATTATGGACTTGTTACTTGGAACTATCTTAACATTTTTATTTGTGATTATATTATTACTTTTTAAGGAATACCCTAGAGCTCTTAGCTCAGATATGAAAAGACAAGTTTATTATTGACTGAATATGGACCAAGAAAGAAATTAAAAAAAAAAAACTTGATGGCAGTACGCAAAACTGCCATATTTTTTTCTACTGTACTGTTAGAATTTAAGGTACTGAAAGAACTATTCTAAAATGCTTGTTTGTGTTTCAGTTTCTAATGGTTACATTTTGCACTCTTAATTTTTAAAAGGATAAAAAAAATAACCTGTCCCTTGGGCCAGTTCAGTCCATCATGTTTTGACATGAGAAATACAGATATGTCTGTCAACTTTCTAGAGGCAGAGTATCCAGCTGTTTGATCATATTTCTCCCACCCTGTATAAAATTCTATATTTAAAAGTTATGCTAATGACTTTGCTTTGGAGATAAAAATCTTTGGAGACTGCCAGGTTGAGCTCCAAAATTAGAGTTGAGAATCTTTGGTGTGTATGCACATTTACTTGCTAATTGTGTACTCTGGTACTTCTACATGTAGTTTATAGTGGGTATCAACCTTTTAAAATGTATTATTAGTACTCAGAAGTTGTGAAACAGAATTTTAAAGCTTAGAGGTTTGTTACTAGATGCTGAAACTGCATGACAGTATCTGGTGTCTTAACTAATTAGATAGATTTGTTGTATTTGTTTTCTTGTTGGATAGAATAACACTTAATCATTTTTAGAAGGGTTTTAGATTACTTGCCATAAAATTTGTATGTGTCTTAGCTCTTGGTAGTTTACGAGCAAAGTTGGCATTCAATTAGTCCTTTTCCTTTGATGTTGCTAAGACAGCTGAAAACTTAATAGTATTATTTCAGGTTTATATAAACCTAAATCAGTTAAGCATAGTAACCTGTGCTTAAATTATTAGTTAATTAAATGTAGGAGATTTTATTTGAAGGGATGAAATTATATCTTGTTTAAGTCACCAAAATGAATTTCATATTTTTTCTCTTTAAAAAACTATGATCTCTGAGAACTGTAAGATAAAAAAAATAATGTTTTAATTTCCCAGAAGTTAAAAATTATAATTAAAGTCTCAGAAAATTGACTGAAGAGGAATAATAAAGAATATATTTTAATATATATGATCAAGAGTTGGTGGCATAAAGCTTACTGGGATGTAGTAATAGAAAGGGTAATTTAGTTAGACAAAAGCCATCAGAGATGAGGCTGTGTGGTACTGTGTGTCTAGAAGAGGTGCAGACAGCAAAGTGGCTCTGACAACAAAGCGGAAGGAGAACTGGGGAAGGAGACCACAGTCTGTCTAGCCAGGGGACCATCAATGGAGAGCTGACCACTGAATGCACAGAGGTAGACCAGAGGAGGAAACGTAACCTACTAAACAATGTTCTAAAATACTCCAGTAAGGCTTTCTGGTATGTTTGTCATTTCACTACTCCCAAGAAGAAGTAAAACAGTTACGAAAACTGTTCTTCAAAACTTAAATTTAACCACAGAGGAAGTATTGGTTGATCAAGTGGAAGAAATGTATACCTTGGGGGAAATAGGGCTCCCATCTTAATTCTGAAAAGCCAGATGAAGAAATAATGGTAGAATGCCCTGAACTATTAAGGAAATCAGAGTGCAGTGTACTTAGAGGAAAGTACCACAGACTCATAGTCTGAAACAGAAAAAAGTTAAAAGCTTAGAGGTCTTCACTGTTTTTATCACAAGTCATGCCATACTTACTGTAGATTATAGCGAGGAACATATTATCCAAAAAAGGGTTTTCTAGGAACATGCATCAGAATTATCTGGGGAGCTTTTCAGAATTCTCATATCTAGGGTCTTTACCCCAGTGGTGCCATGTTCTTTCAGACAGTTCCTCAAGTAATTCTAGTAGGCACCTCCACTGATGTAAAAAGGATTGATATATGTCCCTGATATCTTTCAAGTTGCTGGTCCCAAAGGTAAAGGCTTGTCTGCATTTTCTTCTCTAAAATGCTTTAAGATACCATTTTACACCTACCTCCCAAATTCTCATTAAGAACTTGATAGGTAAAGTTAATAAATTCCTGTTACTAAACTTTGCAGAATTATAAAGAAATTAAGATACTCAAAGGTTAGAGCCCAGCAGATACCTTGTTTTTCAAAAGGCACAAACTAAATTCTGCAAACTAACATCAACTCTTGATAAGATTCTAAAGTGGATTTATTAAATGGATGATTTGTGAACTCTTAATGGTCCACCAGGAGTTAACGGGGCACTATAACCAGGGTTGTTTAGTATTTTAACTAGGATTCTGAACTTGTCAATCCGTAGAATGCAGCCAGACTAACAATTCTCAAAGTGTTTTTGCTGACTCTAGTTTTGAGAGAGATAAGTTCTGTGGTTGAATAAGTTTAGAAACATTTTAAAACAAATTAGGCAGGTTTCTTGGAGCCAATATTCAGAATGATTAAACAAGGGATATACAGAACACAGTATACTAAATTCAGAATTTGACCGTATCCTCCTTCTCTTCTCCCACACTGGTTCTCTAAACTTGCTTATAAATACTAGCCATCAGAAGACAGAATTAACTATTTGGGGTGTTTGTGAACTGAACTTTATGAGAAGATGTTTTTGAGACTTATCTGAGGCTGGTTATTTTTTTACATTTTATTTTATTAATACTTGGGTATACGATTTGGAAACTTGAAAATAAATGACTAGTGTCTTGGGGAAATGAAGTTTCATGTGAATCATTCTTTTATAATTAATTAAAAAATTACAGACCTAACTCTCTCTATATAAAGTGGGTTCTTCTAGAGAAAACAGATTTGATGATACCAATTTTTATAAGTCATCAAACTTCCTAAACTCATTCATACACAAGTAGAGATTGTGTAAAAAGATGAACGTGAGCTGAAAGGTTATCTGGAGGCTCTTCCTTCTGTTTACATCTGAATCACTTAACTGCAAGCTTACGCCTCCCCTAATTTCCACTCCATCAGCCTCTAGTTTAGAATTAAATTGAAACCCACAAACTCCATAGCTAGGAACATTTTTTTTCCTTCTGAAGAAATCTGCAAAGAAGTACTCTATTGATTTAATATACTTTCCATATGTTTAATCCCTGAAATAACCGAAAATTAGTTGTTTAAAGCTTGTTATAAAACTTAACTACATTTATCATAATTAACTTTATACATGTTGACAGCAGAGGATTCGATCCAAAACAAATTAGATGAAAGTGTTAGTCACCCAGTCGTGTCTGAGTCTTTGCCACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGAGTTCTCCAAGCAAGAATACTGGAGTGGGTTGCCATTTCTTTCTCCAGGTGGTCTTCCCAACCAGGTATCAAACCTGGGTCTCCTGCTTTGCAGGCAGATTTTTTACTGTCTGAGCCATCAGGGAAGCCCAGAGATGAAACTGATCCTTAAATACAGAAGAAATGCTCTGAGTACCTACTTTTGTACTAGGTATTCAGGGTTTAAAACAGGGAGCCAAACAGATACCATCTTCTCCGCTCATGGAGCTTCCTTATAGTATAATGGAAACACATCTGTTAATCAGCCTCATGAATAAATAATTTTAAATAAGTGCCATGCAGGAAAAGCATACATTGTATGAAGGCTAATCTGGGGAGGTTGGGGACATCGTCCTTGAAGTTGTGACATTTGAACTACTGGTGGACATGAAGTACGGGAGGGCAGAAAAATTGTGCTTGCAGACTGCAAAGTCCGTGAGGCAGGGAGATGTGTAAGCTGTCCTAAATGATGACGGCCTCGTTCAGGTGTGCACGATATGCCAAACATTGTTCCAAACTTTAAATGTGTGAATTCATTTATTTACAATGACTATGAGCTATGTGCTATTACTACTCCCACTTTACAGAAGTACCAGCAGGCCCAAAGACATAGTTTCTCCAGCAAAGCTAGGCACCATCTTGCCCTAGAAGCTAGGTCAACTTGGCTAGATAAAAGAAGATGAAAATTAATGCAATGTCCTTATTTTTAAAAGATACCTTATTTCTAAGATGGACTTTTTTTTTTTTTTCTCATTTTAACCTCTGAATTAAGGCTACATCTTACTGAACAAGGAATGAGTTTGCATTGTGTTGGAATCACCTGCAAAGCTCGATAAAACACATATTACTGGGCCTCATCCTCAATTTCTGATTCAGGATTGTCTTCAGTTGAGCCTGCACATTCTCATTTCTAACAACCCATGGAAGACCACACTTCGAGAACCACTGAGGTGTTTCTTATTTAGCATTTGCAGCCATATATGTGAAAACCTCTTGAAGCAGGTAAGACCAAGAGAGCACCAAGCATTGAAGCACCCTAGATTCAGAAAAATACTATGTGAAATTATTTGATGATATCTACTCAATAATACTTTATGTGTAATTACAGTTAAATGTGAATATCTCCAGGGCATGTGATCACACCACACAGCTTAGCTTTTTTAAAAAATGGTTAAATCTAGATTTAATCTTTCCTTTATAGCCTCATTTAACAACTTTGTATTTTTCATATATTCTCCATACTCATATAATCTCTATAGAATATGTATAAAGATGTATTAAATGTGTTTTTTATAAAAACTGGGATAACAGTATAAACTTTTAAAGCATCTTTCTTCTGTCTGTCAGCAATAACTTGTGAAAATCAAGCCACCTAGTATAATCAAGGTCAAAGTGAATTATAGAAAGAAAATGAAAGTGTTGGTCACTCAATCCTGTCCAACTCTTTGCAACCCTGTGAACTGTAGCCCGCCAGGCTCTTCTGTCATGGAGTTCTCCAGGGAAAAATACTGGAGTGGGTTGCTATTTCCTTCTCCAGGGGGTCT EMBV3_37537 CTCTCAGTAGGAAGATATTAGAAACCAGATCCCATAGGAAATGTTTGCTGTTGAAATTTC Gene GeneID:529633|CLK4:XM_002689028:82_cdna Constitutive 1 NULL GeneID:529633 7 GENE CLK4 NULL CDC-like kinase 4 EMBV3_31244 AGGACCGCCAGAGCCTGGACATCAGCTCCGGAGATCGACATCCTGGAGGACTGGACGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05051 TCTGCGGCCTTTCATCCCTGAGAAAGACAGCCAGCACTTCGAGAACTTCTTGGAGACCAT Gene GeneID:506450|CCM2:XM_002686879:67_cdna Constitutive 3 NULL GeneID:506450 4 GENE CCM2 NULL cerebral cavernous malformation 2 EMBV3_15546 GGACCAAAAGCCCTCACAGAAACAGAACACAGAACCTGACAGAGCAGATAACCTAAGGGC Gene GeneID:613821|MAP9:XM_002694309:8_cdna Constitutive 0 NULL GeneID:613821 17 GENE MAP9 NULL microtubule-associated protein 9 EMBV3_19356 TCTGCTGAGGGGTGTGATGCTCATCTTTCCATTCACTTTCCTTACCAAGCGCCTGCCCTA Gene GeneID:788263|LOC788263:XM_002693193:191_cdna Constitutive 0 NULL GeneID:788263 15 GENE LOC788263 NULL similar to cOR52N9 olfactory receptor family 52 subfamily N-like EMBV3_21223 CCAGCTCGCACCGCGCAAGACCCTGTACAGGTCCAGATCAAGGAAGAGACGCGCTTGGTG Variant GeneID:523327|RSPH9:NM_001046267:297_cdna 257^422 1 EMBV3_19708 GeneID:523327 23 GENE RSPH9 C23H6orf206 C6orf206 MGC137196 radial spoke head 9 homolog (Chlamydomonas) EMBV3_04683 TCCAATTTGAGATTATTACAGATAGAAATATAACCCTTTGAAATGCACTGTCCTGGGCTT Gene BVT0102_153387 + 0 NULL GK000010.2:76994113-76999768 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014815 TCONS_00014814 1 XLOC_008367 Coding TCONS_00014815 XLOC_008367 Coding Coding HSPA2 10:76991967-76996876 o TSS10600 4909 1 TCONS_00014815_4 636 1 0 0.00260647812343923 0.00270766664566142 0.00229126260707891 0.00225812369675527 0.00173461378092978 0.00116161686117628 0.00303936690996313 0.00365358023993185 0.00616159502923721 0.000868417716181871 0.000224449935757924 0.000676222176200454 0.000297795003836836 0.00235660706131683 0.000490702137707069 0.00318881266535206 0.000166185372225188 0.000618631018369486 0.00438858992950296 0.00347473846286561 0.00162328894397368 0.000241441345392461 0.00183330898562499 0.0021759486198216 0.00445770375190123 0.00292044671988472 0.00389344364721592 0.000476031053590917 7.32511465551943e-05 0.000891759509448008 NM_174344.1 HSPA2 Bos taurus heat shock 70kDa protein 2 (HSPA2), mRNA. 0.0 3306 98.33 0.38908127928295 NM_021979.3 HSPA2 Homo sapiens heat shock 70kDa protein 2 (HSPA2), mRNA. 0.0 3422 89.15 0.529028315339173 TCONS_00014815_4 sp|P34933|HSP72_BOVIN HSP72_BOVIN Heat shock-related 70 kDa protein 2; 0.0 1302 99.84 0.998427672955975 2 coding 0 0 0 0 0.900733955557493 0.42866253902329 0.0138016729687952 0.763129072892948 GCCGGTCACTCCGATCCCGGCAAGCCTGTGGCGGGCGGTCCCGAGAGCGGATTGGCTCCGAGAGTTTCCAAAAGGCGGCGGGGAGGCGACTATAAGAGTGGGGAGCCGAGCGAGGGGAGTGAGAGACGCTTGTTGCGTTCGCGGAGTCTGGTGCTAGGTGACCGTTAGTTGAGGCCGCAGATTTTCTGCCCCAGGTGTTCTCGTCTAACGCTGCTTGCCTGTCTTTCAGTCAGGATGTCTGCCCGCGGCCCGGCTATTGGCATCGACCTGGGCACCACCTACTCGTGCGTGGGGGTCTTCCAACATGGCAAAGTGGAGATCATCGCCAACGACCAGGGCAACCGTACCACCCCCAGCTACGTGGCCTTCACCGACACCGAGCGCCTCATCGGCGATGCAGCCAAGAACCAGGTGGCCATGAACCCCACCAACACCATCTTCGACGCCAAGAGGCTGATTGGTCGGAAGTTCGAGGACGCCACAGTGCAGTCAGACATGAAACACTGGCCGTTCCGGGTGGTGAGCGAGGGAGGAAAGCCCAAAGTGCAGGTGGAGTACAAAGGAGAGATCAAGACCTTCTTCCCCGAGGAGATCTCCTCCATGGTCCTCACTAAAATGAAGGAGATCGCCGAAGCCTACCTGGGGGGCAAGGTGCAGAGCGCGGTCATCACCGTCCCGGCCTATTTCAATGACTCGCAGCGCCAGGCCACCAAGGACGCGGGCACCATTACGGGCCTCAACGTGCTGCGCATCATCAACGAGCCCACGGCGGCGGCCATTGCCTACGGTCTGGACAAGAAGGGCTGCGCGGGAGGCGAGAAGAACGTGCTCATTTTCGACCTGGGCGGCGGCACCTTCGACGTGTCCATCCTGACCATCGAGGACGGCATCTTCGAGGTGAAGTCCACGGCTGGTGACACTCATCTGGGCGGGGAGGACTTCGATAACCGCATGGTGAGCCACCTGGCGGAGGAGTTCAAACGCAAGCACAAGAAGGACATTGCACCCAACAAGCGCGCGGTGCGGCGACTCCGCACCGCCTGCGAGCGCGCCAAGCGCACCCTGAGCTCGTCCACGCAGGCCAGCATCGAGATCGACTCGCTCTACGAGGGCGTGGATTTCTACACTTCCATCACCCGCGCTCGCTTCGAGGAGCTCAACGCCGACCTTTTCCGCGGTACCCTGGAGCCGGTGGAGAAGGCTCTGCGCGATGCCAAGCTGGACAAGGGCCAGATCCAGGAGATCGTGCTGGTGGGCGGCTCCACTCGCATCCCCAAGATCCAGAAGCTGCTGCAGGATTTCTTCAATGGCAAGGAGCTCAACAAGAGCATCAACCCCGACGAGGCGGTGGCCTACGGAGCCGCGGTGCAGGCGGCCATTCTCATTGGGGACAAGTCAGAGAATGTACAGGACCTGCTGCTACTCGACGTGACCCCGTTGTCCCTGGGCATCGAGACGGCTGGCGGCGTCATGACTCCGCTCATCAAAAGGAACACCACGATCCCCACCAAGCAGACGCAGACCTTCACCACATACTCAGACAACCAGAGCAGCGTGCTGGTGCAGGTGTACGAGGGCGAACGGGCCATGACCAAGGACAATAACCTGTTGGGCAAGTTCGACCTGACCGGGATCCCCCCAGCGCCCCGCGGGGTCCCCCAGATCGAGGTCACCTTCGACATCGACGCCAATGGCATCCTCAACGTCACCGCCGCCGACAAGAGCACCGGTAAAGAAAACAAAATCACCATTACCAACGACAAGGGTCGTCTGAGCAAGGATGACATTGACCGGATGGTGCAGGAGGCAGAGCGGTACAAGTCGGAAGATGAGGCCAATCGCGACCGAGTAGCCGCCAAAAACGCTGTGGAGTCCTATACCTATAACATCAAGCAGACGGTGGAAGACGAGAAACTGAGGGGCAAAATTAGCGATCAGGACAAAAACAAGATTCTCGACAAGTGTCAGGAGGTGATCAACTGGCTCGACCGGAACCAGATGGCGGAAAAAGATGAGTATGAACACAAGCAGAAAGAGCTCGAAAGAGTGTGCAACCCCATCATCAGCAAACTATACCAAGGCGGCCCTGGCGGCGGCGGCGGTTCAGGAGCATCCGGGGGACCGACCATCGAGGAAGTGGACTAAACCTGCACTCAAGACAGCGTAAAAACCTCTTTTCCTTTCTATTTTCTTTTTCCTTTTGTTTCTGTTTCTTCTTTGAAATGTCCTTGTGCCAAATACGAGATCTATTATTGGAAGTGTTTAACCGGTGTATGCATATGAAAGGAAAGGTGCAACAACTTAGTTGAATGATAAAAGATTAGTTCTAAAGTTTGATTTTTTAGAAACATTATTTGAGGTATCTCTTTAATGCATTTTGCTTGTTTGCTGACTTGAACGTTTTTTGGTTAGCTTAGTTTGTGCATGGAGATTTGAGAGGGGAAACCTGAAGTTTTCACACAGTTTCTGTAGAAGTTTGGTAACAATAAACTACATAGAAGCTTGAATTGCTTATTTGTATGTACTACTTGAAGAGAAAGGTGAACATTGCAGTAATGTTAAGGAAAGCATACTTTTTGCAAACACATAAATACAGATTTAAAAGTAAAAAGCTGAAATTGATCTAAAAATTACTGTCTTGGAGTTTTTAATTTTGGTTGGTTTTTTTTTTTTTTTTTACTGTTTTACCCATGTATGTCTTTAAGGTATAAGTATAGGGTGAAATTTGTCTAACTCAATCTTATCTAATTCTCAGATGAGTTTCCTGCTTTCAATTACCAGCAACTTAAGGGGAGAAGATCTGGGTAAACGTTACCCTCCTTTTAATACAGAAACCAGAGTTGGCATAAATGTTCAAGTGAAAATCCACCTGAATATTCCAGCAAAATACAAGCTGTATTCCAGGGTTAAGTACAAAAAGATCCTTTCTGTAAACAAAAGGAGTTGTCTTCTGAAAATAACCTAACATAATATGAAACAAGTTTGCTTTCTGCTGCATACAGGTGTCTGAAACAAGATCCAACAAAGGTTAAAGCCACTTAATATTGAGTCCAAATTCAGTCAAACTTTTGTTAACTTTTTCTAGTAAAACAGTTCAAATTCTGGGCATATGGCACATTCAAAAATAATATGTTTTCAGCACTTAAATTACTTGGATGGTAAAGGAAGATAATAGTTTTTTGTTGTTCTGATTTGACGATCATAGTGCTTTTTCAATACCTGCCTTAAATCACTAGAATGTATTTCTTTTTTTAAAAGATAAACTGCAATATAGTCCTGTATTTTGTCAATATGCAACTTGTTCATTTCCCAATATTTCCAATTTGAGATTATTACAGATAGAAATATAACCCTTTGAAATGCACTGTCCTGGGCTTAAGTTTTAAAAATCCACATCCTTGGAAGAAGGGGGTTCATGTTTATATTTTAGTGGACTGACTCATCTGCTTTGTACTGATTTATTCTCTTTAAGGAGAATTTGGAAGAAATTCAGTAAAGCTGATTGGAAAATGCATAGTTAATCTCATGTTTTCACCATACAGACAATTTAATATCTCCTTCCAAGTGATGTAGATTTACTTCATGTTGTTCATGACAGTGACATATAGAAGCTAATTTTAAACTTAGTAGTGGACTCTTCCATATCAAGCAGAGAGAGGAATTTTTGAAATATAAAAACTAGAGAACAAAATAGCCTAAAAATATTGAGCTTTGGTCACAGTCCTCTCACGTAAGAGCTGACTCTTTGTACATAGAATTTTTTTCTTTTAACAAGTCGCATTTGGGTGGGTGGGGGGAGATAAAAAGGCAGTTGTAAAATTGCTTCAAAATAAACATTTTTGAAAAAGAGTTGTTCCTTACACTCTGAAAGGTGAACATAACTTGAGTTTTTCAGTGCTGTTGCCAGAGTGGAAAGTTTTCAGCAAAGAAGCATTAAGGATATTTCATTGACTGCAGATAGCATTGCGTAAATATTTGACAAGTTACCTTGGTAATTAGTAGCCTTAGAGTGACATTTCACCTGAGTTTTTACCAAGATAACATTCATTCTGTTAACCTTTTGTTCTTTATTGAGTGTTTATCCCTTGCTCTAACTTCAAAGTATACAAAGTATAATAGGGTCTTTCTTTAAGTGCAGTTTGGTATTAGTTTGACTCATTTTAGACCTCATTTTAGAAGATTAGTTTCTAAAGGATCAGAAAAATGCCAAATGGTAATCTCTCTGATCCTTTGCCTGACCTCTGGTAACTTGCTGTAACACTAACATCAATCTATGTAGATACTTCATTTTCTGTTATTTTGAAAAGTAATTTGTACAACTCTTGAGTTCTTTTGTCTTCTCAAATTTACCTAGATCTAAATATTGCTTAAGATAAAAAGCCACTAAAGTAGCCATTCATGTTTCCAGGGTCAGTTGAAGCTGGTAACTCAATAACTCATGGGAACCCTTTAGCAGATGTTAGATCAGCCATAGTCAAATGACAATGGAAAAAGTACTTGAGTTCAGGATGAGGCTAAATTACAGTTTAAGGAATAATTAACATCACTTGCCCTTGAAAGTAATACTATGCTAGGGACTAGTGGTCATGACTACAGCTAATGAAATATGTATAGAATGCTTAGGGATTGAAAAAGTACATTTCTCAGAATGGGGACTTAATTTCTTCTTTCTTGAATGTCTGATTAACATTTGTCCCTGTTTTGAGGCAATAAATCTAGACACCTGTCAAAATTGTTTTGAGTATTTCGGTTGTATGAAATTTCAAAACAAGATAACTAAATTTTTTATCATATTAATTTATATGTATAATGGAAGTTAATGCACCTGACTTGTGCATTAGGAGATACTAGTACTCTTTACATCTTTAAATTTAGCATGCATATTAAAATACATAATATATTCTGTATG TCONS_00014816 s 5' 0 TCONS_00014816 s 5' 0 EMBV3_28263 TATTTGATTCCTGTGATTAGGTCATAACTCGCATGTCGAGGCCCCTCTGGTGGAGGGTGA Gene GeneID:540169|LOC540169:XM_002697241:427_cdna UTR3_Alt 2 NULL GeneID:540169 23 GENE LOC540169 NULL similar to Uncharacterized protein KIAA0240 EMBV3_29057 TAGATTTCATAGAAGAGAAGGCATCTCAGAAAGAACAAGTATTTGTTTCCAGTATGAAGT Variant GeneID:515194|MRPL39:NM_001080730:19_cdna 746^815 3 EMBV3_19391 GeneID:515194 1 GENE MRPL39 NULL mitochondrial ribosomal protein L39 EMBV3_32721 AAGGCTTCGACGACGTCATTATCCAAGGGGATCTGGACGAGCTCAAGTTCGTGGCTTTTT Gene GeneID:526295|AIFM3:XM_002694676:240_cdna Constitutive 0 NULL GeneID:526295 17 GENE AIFM3 MGC128925 apoptosis-inducing factor, mitochondrion-associated, 3 EMBV3_10225 TCAGTTTGCACTGAAGGAACCTGAGAAACACCAGTGGGCAGAGACTGCCTCTCACAGCAT Gene BVV0102_361052 + 0 NULL GK000005.2:117673270-117677521 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193669 TCONS_00193666 TCONS_00193668 TCONS_00193667 1 XLOC_117548 Coding TCONS_00193668 XLOC_117548 Coding Coding TTC38 5:117668299-117674601 j TSS144695 2396 2 TCONS_00193668_4 135 0.135225375626043 5 0.620536422790033 3.97028876165498e-10 0 6.10398805351421e-11 5.65555330300179e-11 6.13022150291581e-11 0 1.31698460248849e-10 4.87587058910964e-11 0 0.000359981884939103 0.000638221460474709 0.000451732978474505 2.42034257077239e-05 1.02765066054525e-10 4.02868675987471e-12 0.00227289840506808 0.000388033311013918 0.000307801288913519 7.16370052580979e-11 0 2.92192909244317e-11 0.000446512811819462 0.000171327802339078 0.000876065859957415 4.64675805003876e-11 7.96638011227172e-11 6.59368341949747e-11 0.000325685908931792 0.00040421240426092 0.00113843457021228 XM_003582295.2 LOC100850497 PREDICTED: Bos taurus tetratricopeptide repeat protein 38-like (LOC100850497), mRNA. 0.0 2845 100.00 0.657762938230384 NM_017931.2 TTC38 Homo sapiens tetratricopeptide repeat domain 38 (TTC38), mRNA. 1e-123 448 87.78 0.148998330550918 0 coding 0 0 0 0 -0.0720856667510925 0.68093007343555 0.0135640177530646 0.791483607413501 AGGCCACTTGCTTCCTCACCGCAGAGTGGAGCCTCCAGGCTGCTTCCAGTTGACGGGCAGAGACGCGGAGGTCCAGGGCAGCCACAGGGTCGCGGGAGGAACGTGAGGAGCAGGAGGGGGAGTCGGGTAACTTTCGGGATCCACGAGGGACAGGAGGGGAGGTGGTGTGAGAGAGCAGAGTAGAAGGAACAGTCTCGAGCTGGAAATACAGACCCAAAGGAGTGCTCAGTCACTTAGTCGTGCCCGACTCTTTGCGACAACTCTTTGCAGCCCCATGGATGGTAGCCCGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATGCCCGCCTTCAGGGGATCTTTCCAGCCCAGAAATCGAACCCAGGTCTCCCACATTGCGAGCACATTGTTTACCTCTGAGCCACCAGAGAAGCCCCAAAAGGAAGACCCAAAGGATACTCTTTATGAATTCCGCAGGTTCTGACTGGCCCCCTGCCCTGTGTCAGGGGCCTTCCCAGTGAGAACCACAAGAGCAAGTTTTACAGTGGTTGTGCTCTGTCGCGTCTGACTCTTTGCAACCCCATGGACTGTAACCCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAGGAAGACTGGAGTGGGTTGCCATTTCCTTCTCCAATACAGTGGTTTGGGATGCCACCTGCCAGCTTCGCAGGGTCTCCTCACGGCACCCTCTTGGGCCGGCAGGTCCCCAGGGGAGAACTGCCAGCACCTCCTGGCCCGCGACGTGGGGCTGCCCCTGTGCCAGGCCCTGGTGGAGGCCCAGGATGGGAGCCCCGACCGCGTGGTGGAGCTGCTTCTGCCCATCCGCTACCGGCTGGTCCAGATAGGAGGCAGCAATGCCCAGAGAGATGTCTTCAACCAGTTACTGATTCACGCGGCCTTGAACTGCTCGTCCGGCCTCCACAAGCACGTGGCCCGGAGCCTTCTGATGGAGCGAGATGCCTTAAAGCCCAACTCCCCCCTGACCGCTAGGCTCATCCGCAAGGCGGCCGCCGTCCACCTCCTGCAGTGAGCCGGCCTGGCTGCCCACCCCGCGGGGCCTCTGCGACCCTCAGACCGGCTGCTGCATGGGCTTCGCAGGGTTACAAGTGGTTGGGGCCAGTTGGCTGGGCCTGTAAAGCAGAAGGCCCTGTAACCAGCAGCGTTACAGGAAGAGGGGCAGAAATCAATTTTCAGCATGGTTCCAAATCTTTTTCTAATACTCGCTCAGGGCCATAGTGCGGTTTCAAGCAGAGCCTAGGTGGGGGCTGCTGTTTTATTTGCCTCAAAAACTGTTTTCCCAGGGGACCCTCCTTTACACCTCCCAGTTCGAGGGTTGGAAGGTCGGGGTGGGGTGGTGGTGGGCTCAGCTTGGGGAGGGGAGTCTCCCATCCACCCCTAGGGGCACCCCTCTCCGCACTCCAGGCCGCCCCTGGGATAAAGCCCACCATTCTGCCTTCCTCTCCATATTCTGGAAAGGTTCTGTCGTCCCACCTTTTGGATGAGGGGACCCATGGTGGGGAGTGACTTGCCCAGGGTCCCGACTAGTGGGGGCCCTGTGCCTCCTGGGAGAGGGGCTCCCACCTCAGTGCCTGGGCCCTTGGCCCTTCTGCTGTGTCTGCAGAGACGTCTGCAAGCTTCCCCTGGGGCTTTAGTGGCACTGATTTGGGTAGATTTTCTCTTAATTCTAAACTGCACATTGTCAACCAGGATTCTTAAAAACTTTTTACTTCACATGGGAGTACAGTTGATTTACGGTGTTGTATTAGTTTCAACAAAGTGATTCAGTTATACCCATGCATGTGTCTGTTCCTTTTCAAATTCTTTTCCCATTTAGGTTGTTATAGACTATGGAGTAGGGATCCCTGTGTTCTGCAGTGGGTCCTTGATTATTTTTGTCAACCATGATTTTAATCATATGTATGCACACTCGTTGATCTGCTGTGCTTTCTGAGGTGTGAAGATTGAGTGTGGACGCAGAAACCAAAGCCTTGTGACTTGGCTTTAACAAGATCTGAGCCAGTTTTATAACTGCTGCCTCTGTCTCCCTCCCCGCGGGGAACCCGGCCCTGACGTCCAACTTGGTGATGCTGTGAGAGGCAGTCTCTGCCCACTGGTGTTTCTCAGGTTCCTTCAGTGCAAACTGAAATTAGGTTAGGGACTCACGGGGCACGGAGGGGGCGGGTCTTCCGGGAGGCAGCAGACACCTCTAAATCGACTAGACACATTTCCTGGGATTAAAATAAATTAGTTAATTGGTTCCTTTGCCTGACTGTTACTGGGTGGGCACCTCTGAGCCTCCTCCATGTGCCAGGCCTGGGCTGGGTCCTGGGAAGACAGGCTTCTCCTGAACATGGGGTTGGAT EMBV3_27428 CTTTACCGGTTCCGAGTTCATGGAGAGCCTGTTGAGTAAAGAGATGACTCCCTATTCTTG Gene GeneID:100300830|LOC100300830:XM_002698171:666_cdna Constitutive 0 NULL GeneID:100300830 25 GENE LOC100300830 NULL similar to sperm associated antigen 4-like EMBV3_37078 CCCCCCCAATCCTGTTGTGCTTGGTTCAGAGGGTTGGGCGGAGGCTTTCCTGAAGGGTCT Gene GeneID:100313259|MIR296:NR_031141:681_cdna Constitutive 0 NULL GeneID:100313259 13 GENE MIR296 bta-mir-296 microRNA mir-296 EMBV3_06418 GCCCTGGCCGCTCCAACGATGGCGCCTCAGACAATTTTGCTCATCGAAGTGAAGTTCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18492 TCTCCGGTCAAGCCGAAACGCTCCCGTGGTGCTCCTGGCGGCGGAGATGGCGGGGAATAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16285 TAGGTGGAAGAAGAGGATGACTGCTCAGGATCAAAACAAGATGGTGGCCTCACGAACCTC Gene GeneID:509221|DAB2:XM_002696368:66_cdna UTR3_Alt 3 NULL GeneID:509221 20 GENE DAB2 NULL disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) EMBV3_23719 TCCGCCGGATGTTCTGTCTCAGCGCTTGGTCCCTGGTGGCTTTCTCGGCCTCCCGGCGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27265 TTCAACTTGGAGCCTGTTGTCAAATACTAAAATGATTGCAATGAGGGGAGTGGGAGTGCC Gene GeneID:518974|ATP6V0A4:XM_002686997:859_cdna Constitutive 1 NULL GeneID:518974 4 GENE ATP6V0A4 NULL ATPase, H+ transporting, lysosomal V0 subunit a4 EMBV3_21857 ACTTGGTGACCCTGGCGAGTATGCTCATCAGGTACAGGCCATCAACGAGAACTCATTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14940 GGAGAGAGACAGTGGAAAAATAAAGAGACCTGCTGGGGGATTCGAGAGTTCTTCTGTGAC Gene GeneID:533061|IL22RA2:XM_002690261:47_cdna Constitutive 0 NULL GeneID:533061 9 GENE IL22RA2 NULL interleukin 22 receptor, alpha 2 EMBV3_36894 TCCAGTACTTTACCAACCGCTTCCCACGGCTGTTGCTACACACGCACGGTGCCATGAGAA Gene GeneID:508486|LOC508486:XR_084070:219_cdna Constitutive 0 NULL GeneID:508486 25 PSEUDO LOC508486 NULL similar to endoplasmic reticulum to nucleus signalling 2 EMBV3_18897 GCAATGACATCCGTGTGGCTGGCACTGGAGACCGGTGAGGGCGTGAATGACGTGCGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33446 CCTTACTTGTCATCAAAGACGAACTCAGAGAAAAGAGACGATGGCGTGAGCTGAGAACAC Gene GeneID:533760|GRIK1:NM_001102514:8_cdna Constitutive 0 NULL GeneID:533760 1 GENE GRIK1 MGC142923 MGC148595 glutamate receptor, ionotropic, kainate 1 EMBV3_09049 GGCGCAGGGCGGGGGATGCCAGCGTGCCAGGAGCCATGTGTGACCGAGACTGCGAGATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24003 ATGAATCAAGCAGAAAACTCCCTTCAGGAAGAGCAGGAAGGCCCCTTAGACCTCACTGTG Gene GeneID:540095|LCORL:XM_002688147:12_cdna UTR3_Alt 2 NULL GeneID:540095 6 GENE LCORL NULL ligand dependent nuclear receptor corepressor-like EMBV3_34092 GCAATAAACATAGTAGCACAGATTTCATTTTGTTGCAGTTGGCATACACTGGGGATGATC Gene BVT0102_049490 + 0 NULL GK000007.2:24063507-24071738 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212583 TCONS_00212586 TCONS_00212593 TCONS_00212584 TCONS_00212590 TCONS_00212585 TCONS_00212595 TCONS_00212594 1 XLOC_130219 Coding TCONS_00212590 XLOC_130219 Coding Coding FNIP1 7:23944462-24066108 j TSS159483 6602 1 TCONS_00212590_6 1311 24 0.945924616712565 1.89531269310063e-16 1.7838076875818e-10 2.687830365436e-16 4.7559541223536e-17 2.19167192969937e-18 1.04466459704959e-07 1.50188039522508e-19 3.15506579013043e-08 4.58311864854812e-10 0.00031178617615824 8.38483727009468e-05 3.47682798172961e-09 1.23474624282911e-53 1.89523323445845e-10 2.64209848898251e-13 0.00352033975896926 0.000971870935952509 0.000491992779240153 8.01318966892855e-05 0.000179970271876222 6.07157729486062e-05 0.00198034357137366 0.00102587607524447 0.00172489034249272 1.47819886915219e-08 4.69741043145983e-11 0.00012218944672294 0.000315560439177239 3.97862636773511e-05 0.000202414521755557 XM_002688971.3 FNIP1 PREDICTED: Bos taurus folliculin interacting protein 1 (FNIP1), 0.0 1.092e+04 100.00 0.917146319297183 NM_133372.2 FNIP1 Homo sapiens folliculin interacting protein 1 (FNIP1), transcript 0.0 6511 87.58 0.791729778854892 TCONS_00212590_6 sp|Q8TF40|FNIP1_HUMAN FNIP1_HUMAN Folliculin-interacting protein 1; 0.0 2195 93.84 0.864225781845919 3 coding 0 0 0 0 -0.0336683185333768 0.819595601741053 0.0328119303634032 0.54847523072953 GTAGCATGACGATGTTAGCAGACCAAAATATTTCTTCAGAACTAAAGGCAGAATCAGATAATGCATCTTGTGGAGTTTTACTTGCTGAGAAAAATTGCCCTTCGACCCCTGGGGAAAAAAAAGAAAAACCTGAAAAAGATCCTGAACCTAGAGATACAAATTTTCAAACAACGTTAAGCTCTCGTCGTCTAAAAAGCAAGGTTCCATCATCTCACCAGAGGTCTGTTGTAGAAAGCAGTGCAGGTAAATCAGTTGCTAAAGTTCTGCTGCCTCAGCCTCTCAAACCTGCATTGAACGCACATTCCAGTACTTCTGATAAGAAAAGCAGAGGCCTGTTAACAAGTACTCCATCTTCGCAAACACCTGGTTTAGTGATTGATTTGTCCTCAGTGCAAAAAGCATCTTTTGAAGAACTATTTCCAAATGTCAGCAATTATGTTAATTCAGATGAAATTGTTCCTGTGTCAACTTTGCAAGACAGTTCTTCAAATGAGGGAAGAGAATACCCGTCTTCTCAACTTGAAGCTCATACAGACTTTAGTTGGCCTTTGCCAGAGTTTGATCCAAGCCAGATTCGACTGATTGTATATCAAGACTGTGAAAGACGAGGGAGAAATGTCCTGTTTGACTCCAGTGTTAAGAGAAAAAATGAGGACATATCAGTATCGAAGCTCTGTAGCGATGCTCAAGTTAAAGTCTTTGGGAAATGCTGCCAGCTGAAACCTGGAGGAGACAGTTCTTCCTCTCTAGACAGTTCCATGACTTCATCTTCAGATGTGAAAGACCAGTGTCCTAAGTATCAGGGTTCTCGGTGCTCTTCTGATGCCAATATGCTTGGAGAGATGATGTTTGGCTCAGTAGCAATGAGCTACAAAGGATCCACCTTAAAAATTCATCAGATTCGTTCCCCTCCACAGCTCATGCTCAGCAAAGTTTTTACTGCACGGACTGGCAGCAGCATCTGTGGAAGTCTCAATACGCTTCAAGACAGTCTTGAATTCATTAATCAGGACAACAGTACATTAAAGGCCGATAATAATACAGTCATTAATGGACTACTTGGAAATATAGGTCTTTCACAGTTCTGCAGCCCCAGGCGGGCATTCTCTGAACAGGGTCCGCTCCGCCTGATCAGGAGCGCCTCTTTCTTTGCAGTTCACAGCAACCCAATGGACATGCCTGGAAGAGAACTGAATGAGGACAGAGACAGTGGCATAGCACGCTCCGCATCTCTCAGCAGCTTGCTTATTACACCATTTCCCTCTCCAAACTCCTCACTTACCAGAAGTTGTGCCAGCAGTTACCAGCGACGCTGGCGACGTAGCCAAACAACAAGTTTAGAGAATGGGGTATTTCCTAGATGGTCTATAGAAGAAAGCTTTAATCTGTCAGATGAAAGCTGTGGCCCTAACCCAGGAATTGTGAGGAAAAAGAAGATTGCAATTGGGGTAATCTTTTCATTATCCAAAGATGAAGATGAAAGTAACAAATTTAATGAGTTCTTTTTTTCACATTTTCCTCTGTTTGAAAGCCACATGAACAAATTAAAGAGTGCAATAGAACAGGCTATGAAAATGAGCCGGAGATCAGCTGATGCCAGTCAGAGGAGTTTGGCATATAATCGAATAGTTGATGCACTAAATGAATTCAGAACAACAATTTGTAATCTTTATACAATGCCACGAATTGGAGAGCCTGTCTGGCTTACAATGATGTCGGGGACTCCAGAAAAGAACCAGCTTTGCCATCGTTTCATGAAGGAGTTCACTTTTCTAATGGAAAATGCTTCAAAAAATCAATTCTTGCCAGCACTTATTACTGCAGTTTTGACCAATCATCTTGCCTGGGTTCCAACAGTCATGCCAAATGGACAACCACCTATAAAAATATTTTTAGAAAAACATTCCTCTCAGAGTGTGGACATGTTGGCAAAGACTCATCCATATAATCCACTTTGGGCACAACTGGGAGACTTATATGGCGCTATTGGCTCCCCTGTACGGTTAGCAAGGACTGTGGTAGTTGGCAAACGACAAGACATGGTTCAGAGGCTGCTTTATTTTCTTACTTATTTCATAAGATGCTCTGAACTTCAAGAAACCCATCTTTTAGAAAATGGAGAAGATGAAGCCATTGTTATGCCAGGCACAGTAATTACTACCACTTTGGAGAAAGGAGAAATAGAAGAATCTGAATATGTGCTGATCACAATGCATAGAAACAAAAGCAGTTTGCTCTTTAAAGAGTCGGAAGAGACAAGGACTCCTAATTGTAACTGTAAATATTGCAGTCGTCCACTCCTTGGGCAAAATATGGAGAATGTTTCACGACAAGAGAGAGAAGATATTCAGAACAGCTCTAAGGAGCTGCTTGGAATTTCAAATGAGTGCCAGATGATTTCTCCGGACTGCCAAGAAGAAAATGCTCCCGATGTTAAACAGTACAGAGATAAGTCAAGAACTTGCCTTGATACCAAGTTAGAAACAGTTGTTTGCACAGGATCTGCTCCAGTAGACAGATGTGCATTGTCAAAGTCAGGCTTAGACCCAGCAGAGGAAACGTGGCAGAATGAGGAGTTGCTAGATTCAGGTTCTCACACAGGTAAAGTGTTGAGATCTGCAGGAATGGTTGTGGAAAAAAAACCTCCAGATAAGCTTGTGACAGCTGCATTTTCTTGTGAGGCAACCCAGACAAAGGTTACTTTCTTGATTGGGGATTCTATGTCACCTGACTCAGATACTGAACTCCGGAGTCAGGCAGTAGTGGATCAGATTACCAGGCATCACACCAAATCACCGAAAGAAGAAAGAGGGGCTGTTGATCAGCATCAAGAAGCTAAACAAACAACTAAATCTGAAGAGTCTGCTATACCGAACATAGTATCTGGAGAACCCTGTGAACTCCCTTGCTGGAATCATTCAGACCTAGAAAGCATGAGTTTATTTGATGAATATTTTAATGATGATTCAATTGAAACCAGGACTATTGATGATATTCCACTTAAAACAAGTACAGACAGTAAACAACACTGCTGTATGTTAGAGTTTTCAAAAAGGTTGTGTACAAAAAATAGCAAACCAAACAATGAATTTTGCAAATGTGTAGCAACAGTTCACCAAGATTCATGTAAAACCTGTTTTCCTCAACAAGACCAAAGAGATACACTCTCCATTCTTGTCCCCCATGGGGATAAAGAGAGTTCAGAGAAAAAAATTGCTGTGGGAGCTGAATGGGACATTCCAAGAAATGAAAGTTCAGATAGTGCCCTTGGGGACAGTGAAAGTGAAGATACAGGTCAAGATGTAGCCAGACAAGGAAACAGTTATTATGGAGGAGAGCAGGAGGATTGGGCAGAAGAAGATGAGATACCTTTTCCTGGGTCGAAGTTAATTGAAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTTGGGAGATCCTTGCTGGGTGGCTATTGCTCTTCTTATGTCCCTGACTTTGTTCTTCAAGGAATTGGGAATGATGAGAGGCTCCGTCAGTGTCTGGTGTCAGATTTGTCTCATGCTGTGCAGCATCCAGTATTGGATGAACCAATAGCAGAAGCTGTCTGTATTATAGCAGATATGGATAAATGGACTGTTCAAGTGGCCAGTAGCCAGAGACGAATGACAGATAATAAATTGGGAAAGGAAGTGTTGGTTTCCAGTCTTGTTTCCAATCTGCTTCATTCCACTCTTCAGCTTTATAAACATAACCTGTCTCCAAATTTTTGTGTAATGCATCTTGAAGATCGGTTACAGGAGCTGTACTTCAAGAGCAAAATGCTGTCTGAGTACCTGAGGGGGCAGATGCGTGTTCATGTCAAGGAGCTAGGAGTGGTTCTAGGGATTGAATCCAGTGATCTTCCTCTCTTGGCTGCTGTAGCGAGCACTCACTCCCCATATGTTGCTCAGATACTACTTTAACATAAAGGCTGTTGGAAGTTAACTTCAGTGAAAAGTTAAGTAGAAACCAAGGAAGCAGTCACAACATGCATTTATGGCAATTTTTTTTCTCTGTCAGACTTTCATCTGAATGAGTCAGTCACCTTGGTATTCTGTATTGCTGTGCATATCATGTCACCGGATGACTTTTTCATTTTAATTGGACTTTTGGATGGTGGTAGATTTTTAACCAAGTGAAACTAAAAAGAGCGTTTTGGGGAAAAGCATTTGAAGATGCCACATTGTAACTTAGAAGTTTCTATAAAATGAGTAACATTGAAGAATTTGATTATGATCACTACAGTCTTGCCACAGCTCATAAGTAGCAACAGGTATCTCACTAAATGGCCCAGAAATAGTCATTTCACTAGTTTTCTTTGTTTCTAAGGTACAGAGATCTATAGAGTTGTGATTATTTGGTTTTGTTTGTTTGTTTTTCAATTCAAAATACCTAATTTCTAAGTATTTCTCAATATTTTAAACAACTTTTAATTAAAATAAACTCAGAATAAAGTGTATAAATTTGTGTTATGTTATCCACCCAAGTGTACATATGTATCTATTTTTTAAAAAACCAGAGGTAGAAATACAAGATTGGTAAACATGCCTTTTTAAAGATATATTTTCAACTAGTAGTAATTGTATATAGTGTTGAAATATTATTTTCTGGTGATTTTTCTGTTTCACACACCCTAAACTATAAGTAAAGCCAATCTTTTTTTAAGGTTGAGGAATGTAGATTCCCAAAATAAGAATTCTACTTTATACTATTTGTTTTGTTTATAAGTATAAGCTAATTCTTATAAATGTTAATATTTACATATTTGCATCTAATTTAATAAATTAAAATTGGGATTAAAAATTGCACCAAAGCATTGGCAGAAATAATACTATTTTCTTTAAAAGTGCTCAGGTAGCCGAGGCCCTTGGTTTTCGGTATCAAGCCCTTCTTGAACCCATAGGAACTGAATATTTGTTCACTGCTTCATAATATTCAATTTACACTAACAAAACTCATTAATTCTTAAAATTTTCTTTTCTCTAATAGCTCCTCCCTTTCCAATAGCTAATATTTTTTCAAAGATTTCAACTTTTCAGTTGTAACTGTTTTTGTATATACTGGGGAGGGTTGTTTGTGAGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGATGGGTAGATAAAGTTTTCAATATGCTCTACTACCTCAGTTTACTTGAAATACTACATTATATTAATAGTTTATCCTTTACTTATCTAGTCTAAGATGCTCTTAATGTAAGAAGTGAAACTGGTTTCTGCTTTCATGAACTATTTTCATCATAATCAGCTGATTAGCTTAAAACTGAAAACCACTTGCTTATTCTGTTACTAAGTATCTTTTGTGTATAATGCATCCATTCTTGCTATTTAAATTTTCAGTAATTAAGGAAATTTCTGTGGTTTATTTAGTTTCTGACCTCAAATTTATAGCATTGGGTCACATTTTACCTTGTTCTCATCTCCAGCTAGACTGAGATGAAATGGTTATTTTAATGGAATGTAAACCTGAAGTTGGTGTGCCTGCAGGCAGTTTGGCCCCTGTATCCTCTCAGCTGCTTTAGTGCCTGAGTCTCCCATGGGTGACTTGCTGTCAAAGAGTGTTTGTGGATATATTTTCATTGGCATAGTTTTTTTTAGTCTATTCATTAAAGAAATTCTCTGATCTGTTGTTTGGAATTTTATGAATCAGTCTCTTTTTCTGAATTCAGAATATGGAAAAGATCGTATGTGGGCCACTTATATTTTTTCTCATCATAGTTCAGGATGCATAGCAGGTAGATAATGTCTTGTTTTTGTGTCTTATTTTTTAAATTAATCATCAAACTATTCACAGTCCTGTCTATTTGAAATCTGTAATAAATTACCATTTTGGAAATCTGGTTTTCAACAAATGGATGGCTCATGCTACTGTAATTCTTAAAACTAAGCTTCGTATAGAATCATTAATCCTGTAAGGATTCCTGAGTTCTACAATTTACCATCCTGTAATTTTTGCTCAGTTTGTTATAGTTATTCTTTCATTACACAAAGCCCAAGGAATGAACTGCTACTTCTTTGAAGTATGGTCATTATGATGAATGTGAAAAGAATTTTGGCCTTTTCAAAACAATTTTTCAACTTCTTATGGTACAGACAGATATGTAGTACACATTTTAAAAACCTGTTTGTTGCAGTAGGAAATGAAAAAGGAATCTTTTACATTATAGATTTAAAACTAATTTTTCCTGTATATAAACTAATTGTTTTGATTTTAAATATTCCTGGTTTCTATTAATGTGTCTTAATTTTGAGTTTGAAAATGTTAAGTGCAATAAACATAGTAGCACAGATTTCATTTTGTTGCAGTTGGCATACACTGGGGATGATCACTTAAAAAAAAAACAGATTTTACACAATGCCTACTTCTGCTAGATGTCTTATGAGATTGTTTTGCTTTCTCTAAGTTATTTAGATGGTGGGAGATGTAAAATGTAAATACGTGTTTCTTGTTCTGTATACATTTCTCAAATGTACGCCTGTATTATAATAACCTCCCAGTTCTAGGGGATATTTGTGCAATAAATACACATGTCAATTTGATGGATG EMBV3_21956 ACCATCCGCTTCCAGCAGACTATAGAGGGAAGGCCCCTCAAGAGAGAGATGCAGTCTGAT Gene GeneID:511321|SPEM1:NM_001079586:72_cdna Constitutive 0 NULL GeneID:511321 19 GENE SPEM1 NULL spermatid maturation 1 EMBV3_10021 TCAAGGTGGTCAGAGTTAGATCTTCTCAGCTTCTTGGGAACCGTGGGCCATGTGTTGAGT Gene GeneID:511496|GPI7:NM_001024518:19_cdna Constitutive 0 NULL GeneID:511496 6 GENE GPI7 NULL GPI7 protein EMBV3_04572 GAGGGAGAAGGAACTCAGTGACTGAGATACAGAAGTGGGAAGACTAATTGCACAAATATA Gene BVT0102_232033 + 0 NULL GK000029.2:40568786-40586461 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163667 TCONS_00163665 TCONS_00163668 TCONS_00163670 TCONS_00163669 TCONS_00163666 1 XLOC_099985 Coding TCONS_00163669 XLOC_099985 Coding Coding TMEM138 29:40563289-40571165 j TSS122618 3339 3 TCONS_00163669_2 67 0.260856543875412 4 0.576507936507937 0.000456306715270435 9.18940769345935e-11 0.000111243735038935 4.1689385951677e-17 0.000391069552789778 1.709038131218e-05 4.27200930444207e-09 0.000373044586541378 4.33100775764738e-21 8.43173888466234e-05 2.18574980466226e-06 7.54040078450722e-09 5.15450551185486e-05 3.15187776250542e-12 1.75336251644111e-10 9.09351355234233e-12 9.17939839772128e-12 2.13544655055019e-05 0.000118059107868056 0.000480697581964448 1.73750373393748e-21 1.72073101788997e-14 1.73220311330939e-09 8.08326236122691e-08 0.000671170190692696 0.000288353151530053 1.50620716674475e-08 6.1425961847921e-13 6.12839449545413e-12 1.82031440548762e-05 NM_001098967.1 TMEM138 Bos taurus transmembrane protein 138 (TMEM138), mRNA. 0.0 1223 99.71 0.204552261156035 NM_016464.4 TMEM138 Homo sapiens transmembrane protein 138 (TMEM138), transcript 6e-118 430 70.72 0.292003593890386 TCONS_00163669_2 sp|A5PJY4|TM138_BOVIN TM138_BOVIN Transmembrane protein 138; 3e-12 59.7 100.00 0.626865671641791 0 noncoding 0 0 0 0 1.22569108970626 0.03060437679492 0.0322698308540806 0.516872184343013 AATTGCTCTGCTCTACCGAGGGAACGCGGCGAATAGGGAGCAAGGGAAGCAGCTGCCTTTCTGAAGAACTCAGTGCCTGGGGGAGGACCAGTAGTTGTTTTCTGAGGAACTGTGGAATGTGCCCTTGGAGGCACAAGAGAGCAGAAGGAAGATGCTCCAGACCAGTAACTACAGCCTGGTGCTCTCCCTGCAGTTCCTGCTGCTGTCCTATGACCTCTTTGTCAATTCCTTCTCTGAGCTACTCCGAATGGCTCCAGTCATACAGCTGGTGCTCTTCATAACTTACGCTGGAAAAACTCCAACTGCTTTGTCTGGACAGATGGACTTCAAACATTGTTTGTATTCCAGAGGTTAGCGGCGGTGTTGTACTGTTATTTCTACAAACGGACAGCTGTGAGGCTGGGCGATCCTCGCTTCTACCAGGACTCTTTATGGCTGCGCATGGAGTTCATGCAAGTTCGAAGGTGACCGTTTTCTGTCACATCGATGAACGCCTTTCCTTCCTGACAGAAGTCACACTGGGGGCTCTGCAGAGGGGGCGGTTGGCCCTGCGTGCTAGGAAGTAGCTTGACATTCCGAGGACAGGCCCCAGCCAGCCAGTGTGCAGCAGGTGAAGAGGAGGCGCCGCCCTCCAGCACCTTAACGCGTCCCCAGTGCAGACTCCTGAATGCCGTCCCTTCCCAGCCTCCTGCCACAGTCCCACCCCCGTTCCCTCCTGCCCTCTGCCTTCTTCCTCACTAAGGGCTCTGTGGCTTTTCCCAAGGGAACTTTCCACTGACCCTAGTACAGATGCAGCTCCCAGCCCCGCCTCTGTTTGCACTGCACACTAATGATTGAAGGATGCAAAGAGTGACTTTTCTGGGCTCCTGACTGAGCACACCTCAGACATTTAGATTTTATACCCAAGGTACTTTTTTTTACATTGTATAAATAGGAAATAAATTCTTTTCCATAAATGATGGAGTCTCTGCCTTGCTCAGTCCCTCTGCGGTTAAGAGGGATGCCAAGTCCTAGCCTAGCCTAGCCTTAGTGTCTACTTGGTCCAGTGGGCAAATTGAGCCACAGAGGAGATATGGGTATTCTTCAATCCCATTGTCAGTACAAGATATTTTTGCAGAAAAGATGTGATCTGATGCCCCACCCCCATCTCTGGAGTTTCAGACTTCATGTTTAATTCAGTCTTCCCCCGTCAGAGCCCAGAACTGTCCTCGGGAGAGTGAAATGTTCCCTAGCCTCTTTTGGCAAAAGAAATCTTAAACACTGGTGTGCCCGTAGTATCAGTTTTCTGTTGCTTAGAATAGTTGCGTGTAACAGACCCACCACCACACTTCAGTGCATGGCTCTTGAGTTGAGGCTCAGCTCATCTGACTGGGTTTGGGTAGTTTCTGCTGGGCTTACACATATGTCTGTGGTCAGCTGTGGGTCAGCCAGGCAGCTGTCATGATCTTGAGATCATTGACTTCTGGCTAACCTAGGCTGACCTCTGTTAGAATGACTCCGCTTCACATGACTTACTGTCCAGCAGGCTTGCCTGGGTTGGTTGACTAGACAGTGGCAGAGAAGCAGGAGATCAAGCTATAGGGAGCAGCCCCAGTTCAAGCCTCTACTGTGTCTCTTCAACTCCCATTGGTCAAAGCAAATCATGTGACTGAGCCCAGTGTCAGAATGGGAAAGCGCTAGGACGTTTCATGGCAAAAGACAAGGGTGCGGTCATTCCGCCCCACCAGAAAGCTGCCCCATGAAACTCATTATTCAGAAGTACTTTGGCCCAGGAGTTGGCAAACTTTTCCTGTTAAAGGTCAGATAGTAAATATTTTAGATCTTGAGGGCCATGTGGCCTCTGTTGCAGTTACTCAACTTTGACATCAAAGCACAAAAGCAGCAGAGATGAAACTCAGATGAATGACCCATGACACAAATATTTTGATTTTGTTTCAACCACATATAAATGTAAGTCTAATCTTAACTTGAGGGTCATACAAAACGGGCTAGATGTGCCCTCAAGCCATGGTATGCTGACCCCTAGTTTAGAAGCCTACAATGAAGTCCTAGGGAAAGAGAGGCTGTAGTTAATCAGCTGTGCTGTCAAGATTTATCAGATATTTTAAAAGAAAGTTACAGAGTTCTAAGAAAATACCTAAGATCTCATCCCCTATAATTGGGGGACGTGATCTAAGAAGTCCTAACAAAACCACCATCTATGTGTACTGTATCTTCGTCTGTACAAAAAATGACAACGGCCCAATTTTGAATCTTTTCATAAAAGCTCTTACAGGAATATTATCCCCTTTACTCATCACAACCCCTGAAAGATAGGAGATTTTTTTGTGTCCCCAAATGAATCAGGGCTGGATTGTTCTCTGCAGTCTTTGCAGCTAGTAAGTACAATCAAATGTTTGTTTTCCTCACTCCCAGTATAAATGCCACTTTGTAGTCCCAGGAGTCTCTTGGGGGTGTGTGTGTGTGTGTTCCTTCCTTCCTCCCTTCCTTCCCACCTCCCTCTCTCCCTCCCTCCCTCTTTCTTCCTTTGTTTCTTTATCTTGATAGTTAATGCATTCATGTGATATAAAATTGAAGTTATATTTGTGCAATTAGTCTTCCCACTTCTGTATCTCAGTCACTGAGTTCCTTCTCCCTCCCCTCCTTGACAATCTACATTTACTTGCATAATTTCTTACAGACAGTGTAATATTTCAGAAACATTTTTACAAAAGAAAAAATATGGCTACATCCTACCCTGGAAATAATATCATATCTTTAGTGCTATGTATTTATGTTTTATATACGGTTGTGATTATGGGGACTATGCCATAACCTGGTTTGCTTTTCTTTTTTCACTTAGCCGTAGGAATATATTTTTAAGATGTGATGTAAACTGATTGCTTGGGGCAGTTAGTTTTCAAAGATCAAAGGAAGAAAATAAACACTTTTAAAAGTGCTGACTTTTAATAGGATGGAGTTGCTTCTAACTGACCAATTAGAGAACTAGAAAGACCAGACAAAATATGAAAGTCATCTAAAAAGATCTTAGAGAATTGCTGAAGGAAAGATGATGAAAGGCCCTAAAATTCTGAAGTAGAATCAGGGACGTGAGCTGACAGTTTGCAGCAGACTTTCCCCTGGGAGCATTTGCTGACTCTGGGTTTGAGCAAGAGGCTGAGGATCCAAGCATTGCCCAGGCAGAGGGGACCAGAGAAGCCAGTGGAGCTTAGTGCTCTCATAACACTGGAAGAACAAAACTGGGGACTGAAAGAGCCTTAAAGACGTAACACATTTCTTCTTTTAGATACTTACCAAACACTGAAGCTGTATAGGGCCAGAAGCTATAAAAAGCTAAAC EMBV3_40628 ACTTTGCATGCTCCCATGTGTCAGTCCACGGCCTTTGCATCAGATCGCCTTGTCTCTGAT Gene BVV0102_097972 + 0 NULL GK000030.2:14283629-14294116 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36561 AATTGCCGCTCACTGCAAAGCCCAGAGAAACCTGAACTCCTTCTTTGCTATCGTGATGGG Gene GeneID:519566|RAPGEF5:XM_002686711:50_cdna Constitutive 0 NULL GeneID:519566 4 GENE RAPGEF5 NULL Rap guanine nucleotide exchange factor (GEF) 5 EMBV3_03428 TGGAATAAGAATGCCTTGGTTATCTGTGGTTTTCATGCCCTTTGCCTGCTCCGCACCACC Gene GeneID:782651|LOC782651:XM_002698456:469_cdna Constitutive 0 NULL GeneID:782651 26 GENE LOC782651 NULL similar to Outcome predictor in acute leukemia 1 homolog EMBV3_07671 CCAAAAGAAAGACCTGCTCCTGGACTTGATTGCAGATGGGTTGTTTGGTGTCCCGTCTGT Gene GeneID:497207|BREH1:NM_001012287:99_cdna Constitutive 0 NULL GeneID:497207 18 GENE BREH1 NULL retinyl ester hydrolase type 1 EMBV3_01617 GATAGTGTGATACCTACCAAGGCTCTCACGACCACAGGAGTTTTCTCTAGCTCTTGTCCC Gene GeneID:532865|CLEC7A:NM_001031852:40_cdna Constitutive 1 NULL GeneID:532865 5 GENE CLEC7A MGC127600 C-type lectin domain family 7, member A EMBV3_39512 CTTCATGTACTTTGGGCCAAAAGCTTTACGGTTTGTCAGTTAACAGATGAACAGATCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19232 GTCTAGCAAATCCAAAAAGTGCAAAAAGGTGCACGATGCGCTGGAGGACTTCCCCAAGAG Gene GeneID:505169|GATA3:NM_001076804:5_cdna Constitutive 0 NULL GeneID:505169 13 GENE GATA3 MGC142334 GATA binding protein 3 EMBV3_32351 TTCCCTCTATCTCACCCCAGTGTAAGTTCATTAAGGGTGGGGACAATGATTCTTTGGTTC Gene BVT0102_020733 + 0 NULL GK000015.2:46288702-46301833 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061461 1 XLOC_036984 Coding TCONS_00061461 XLOC_036984 Coding Coding LOC782386 15:46296327-46346988 j TSS45734 6101 1 TCONS_00061461_5 828 0.278806752991313 12 0.879806553493881 0.000582911755692427 0.000485081075841326 0.000258092983920682 0.000180668247592382 6.30023687551373e-05 3.7219879854258e-05 0.000131829873225734 2.69372193571562e-05 6.40434150405001e-07 0 6.05699454701681e-174 2.61960099960527e-180 0 0 8.11632687187324e-184 8.28143248103375e-06 3.03389960707557e-140 6.70364492286174e-06 0.00077636897689076 0.000647841884265072 0.000248218416450145 3.03095293248582e-221 8.21445631669108e-06 0.000204671143611775 0.00101433917520557 0.000999000450902298 0.000643341120225358 5.15118024561457e-232 4.06289057778814e-06 2.54602531642922e-244 XM_003586962.2 NLRP14 PREDICTED: Bos taurus NLR family, pyrin domain containing 14 (NLRP14), mRNA. 0.0 4138 99.74 0.378298639567284 NM_176822.3 NLRP14 Homo sapiens NLR family, pyrin domain containing 14 (NLRP14), mRNA. 0.0 2289 80.62 0.403704310768726 TCONS_00061461_5 sp|Q86W24|NAL14_HUMAN NAL14_HUMAN NACHT, LRR and PYD domains-containing protein 14; 0.0 1084 65.97 0.978260869565217 3 coding CTGCCCCCGCAGGTGTTTGCCCTTCAATCCCAGAGTCTTCCCTCCACCTGTGCTTCGCCTTTATTCCTCCACCCCGTGCAGCCTCCGCCCCGTTCTCGCCGCACTGAAAACAAAACTGTCAGCTCTGCAGTCTCTGGGCTCCTCGCTGAAGTTGTTTCCCCCAAATTTGTGAGTCCACACCCTTTCTGATGAGCCTTGTGCTGCTCTGTAGTCTTCTATTTCTCCCTCTGTGGGTCAGAGATCTCACCTTCCTGTTGCCTGGACTTACACAGCTGCTTCTTGAAGTCCCAGTTATCCCATGTTCTTTGGATTATCTTCCCCACTGAAGCTTGAATATTAATCCATAGACAAGATGACGCATTTGTCGTCTTCCTCCTTCTTTTCTGATTTTGGGCTGCTGTTGTATTTGGAGGAGCTAAACAAAGAGGAATTAATTAGATTCAAGTCATTTCTAAAGAATGAGACCCTGGAACCCAGGTCCTGCAGGATACCCTGGTCTGAAGTGAAGAAAGCCAAGCGGAAGGATTTGGCTGACTTGATGAGCAAGTATTATCCAGGAGAGCAAGCCTGGGAGGTGGCTCTCAGTATCTTTGGCAAGATGAACCTGAAGGATCTGTGTCAGAGAGCAAAAGCAGAGATCAACGGTGAGTGATGGACTGCCCAGACCATGAGAACAGAGGACACCGAGGCCAGAGAGGTACAGGGTGATCAGGAAGCAGTGCTGGGTGATGGAGCAGAATACAGAATTCAAATAAGGGAAAAATTTCGCAACATGTTAGATAAGAACCATTTGCTTGGGAAATCTGGAGATTTCTGTCATGAAATTGCTCAGGAAGGCCGAGAACTGTTGGAACGTTTGTTTGGTGAAGAAGTTGGAACCGAAGAGCAGCCACAGACGGTGGTCCTTCAAGGGGCTGCTGGAATAGGCAAAACAACGTTGGTGAGAATGATGATGTTAGATTGGGCACAGGGCAACCTCTACCAGCAGAAATTTACCTATGTTTTTTATCTCAATGCAAGAGAAATCAACCAGTTGAGAGAGAGAAGCTTTGTTCAGTTGCTGTCAAAGGACTGGCCCAGCACAGAAGGTCCCATTGAAAGGATTATGTCCCAGCCAAGTCGTCTCCTTTTTATTATTGATAGTTTTGATGAACTGAACTTTGCCTTTGAGGAGCCTGAGTTTGTGCTGTGTGCAGACTGGACCCAAGTACATCCTGTGTCCTTCCTCATGAGTAGTTTGCTGAGAAAAGTGATGCTCCCTGAGTCATCCTTGTTGGTGACGACAAAACTCACAGCTTGGAGGAAACTAAAGCCTTTGTTGAAGAATCGGCATTCTATACAGTTACTAGGTATGTCTGAGGATGCAAGACAGGAATATATTTACCAGTTTTTTGAAGACCAGAGTTGGGCCCTGCAAGTATTCAGTTGCCTAAGAAACAGTGTGATGCTTTTTAACATGTGCAAAGTCCCCGCAGTGTGCTGGGTCGTTTGTAATTGTCTGGAGCAGCAAATGGAAAAGGGTGCTGATATCACGCTGACTTGCAAGACAACCACTTCTCTGTTTGCCTGCTGTATCTCTAGCTTGTTGACACAAGTAGATAGAAGCTTTCCTGGTCTACCCAGCCAAACCCAACTGAGGAGCCTGTGCCACTTGGCTGCCAAAGGAGTATGGACTATGACATATGTATTTTACAAGGAAAATCTCAGAAGACATGGGTTAGTGAAATCTGATGTTTCAATTTTCCTAGACACAAATATTCTTCAAAAGGACACAGAGTATGAAAACTGCTACGTGTTCACCCACCTACACATTCAGGAGTTTTTTGCAGCAATGTTCTATGTGTTGGAAGGCAATTGGGACGCCAGGGACGATTCCCTTCAGTCTTTTGAAAATTTGGAGCTGGTGCTTGAAAGCAGCAGTTATAAAGACCCCCATTTGTCACAGATGAAATGCTTTTTGTTCGGCCTTTTGAATGAAGATCGAATGAAACAACTGGAGGAAACTTTTAACTGTACAATGTCACTGGAGGTGAAATGGACAATACTTCAGTGGATGGAAACACTGGGTAGCAGTGAACAGCTTCCATCACACCTGGTTTTTCTGGAGTTGTTTTTCCACTTGTATGAGACTCAAGATGAAGTATTTGTAAGCCAGGCAATGAGATATTTCCAAAAGGTTGTCATTAATATTTGTGAGGAAATCCATTTGCTTTTGTCTTCATTCTGCCTGAAGCACTGCCAGTGTTTACGGACCATGAAGCTGATGGTAACTGGGGTATTTGAGAAGAAGATGTTAAACTCAAGCTTCCCACCTGAAACTTGGCAAAGGGCTGGCAGTCACATTTTTCATTGGTGGCAAGACCTCTGTTCTGTGCTTCATACAAACAAACACTTGAGAGAAGTGATCTTGTGTCACAGCAACCTTGATGAATTAGCAATGAAGATTTTTAATCTAGAGCTAAGACACCCAAACTGTAAACTACAAAAACTACGGTTGAGATTTACTTCTTTCCCTGACCTTTGTCAGGGTATCTCTGGTTCTTTGACTCACAATCAGAATCTGATACATCTTGACCTGAAAGGGAGTGATATAGGGGATGATGGAGTGAAATCATTATGTGAAGCTTTGAAACACCCAGACTGTAAACTACAGAGTCTAAGGCTGAGGCGCTGCCATTTCACTTCACTCAGCAGTGAATCTCTCTCTGCCTCTCTCCTGCACAACAAGAGCCTGATGCACCTGGATCTGGGGTCAAACTGCCTGCAAGATGATGGAGTAAAGCTTCTGTGTGATGCCTTTCGGCATCCAAGTTGCAGTCTTCAAGACCTGGAATTGATGGGCTGTGTTCTCACTAGTGCATGCTGCCTGGATCTGGCTTCTGCTATTTTGAACAACCCAAACTTGCAGAGCCTGGACCTCGGGAACAATGACTTGCGGGATGATGGAGTGAAATTTCTGTTTGAGGCTTTGAGACATCCAAACTGCAATATTCAGAGGCTTGGGTTGGAACACTGTGGTTTGACTTCTCTCTGTTGTCAGGATCTCTCTTCTACTCTTAGCAGCAACCAAGGCCTGATAAAAATAAGCCTGACACTGAATACCTTACAGTGTGAAGAAATTATGAAGTTAAGTGAAAGTCTTGAGGTCTACTGAATGTAAACTACAGGTTCTAGGGTTGTGCAAAGAGGCACTTGATGAGGAAGCACAGAAGCTGCTGGAAGCTGTGGCGAGTAGCAATCTACGCCTAGCTGTTAAGCAGGACTGTAATGATCATGAGGAAGAAGATGGTTCCTGGTGGCGGTGTTTCTGATTTGAAGAACCTGATGTCCTTCAACGAAGTAAAATGAAGGCCTCAGAGTGACAAGTAGTCATGTATGGATGTGATTGGACTGTGAAGAAAGCTGAGTGCGGAAGAATTGATGCTTTTGAACTGTCGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTAAAGGAAATCAGTCCTGGGTGTTCTTTGGAAGGACTGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGAAGGGAACGACAGAGGATGAGATGGCTCGGTGGCATCACCGACTCAATGGATGTGAGTTTGAGTGAATTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCATGCTGCGATTCATGGGGTCGCAAAGAGTCAGACACGACTGAGTGACTGAACTGAACTGAACAGTATATAGAAGCAATGCTATTTACATTTTGCACATGTGCCTGGTATCACTGCTATCAGGTAACCCATGAGCCAGGATAAGGATGAGACAAGTAAAGCACTTATTCTTCTGACTGTGCAAGTTCCAGGTCAAACACCATCTTTATTTAAATTTTAAATACTGGTTATCATGGATTTTTTGCACTAATTTTTATTTTTAAAAACATTTCACTAAAATATTATTTATCTTCATTCCTGAGGGGCTTTTTGGCATCTTCTTAAATTTTGTGCATCAGGAAAACCACTTCCCTCATTCTAAATAGAGCTCTATGTTAGGATAGGTTTGCAGTTTTAAATAGTATAGTTAAGGAGTCAAATACGATAGCGAAAGGATCAAATAGGGCGGTCAAAACAAATGTTATATTTGATTCTTTACATTTTGTCTGTTTTCTTTTTATAGATTTGTATTGTAAATTCTTATTTTATTTCTATTATCTTTGAATTTGCTTTGTTAGTATGCTAACTTAAGTTAGATTCTTACTGATTTCCAACCTTCTCTTTTATTATAAGCATTAACAATATACATTTCCTTCTATTTGTATTTTAATTGAATTCCCATCATTGACCATGGAATCTTTACTGAAGTAGAGTTGATTTATAACATTATTTGTTTCAAGTGTACAACATAGTAATTGACCATTTTAAAGTTTATATATTCATAGCTATTATAAAGTATTGTCTATATTCCCTGTGTTGTACAGTATATCCTTGTAGCTTATTTTATACATAGTAGTTTTTATCTCTTAATCCCCTGCCCCTATATTGTCCCTCCCTCTTTTCTCTCCCTACTGGTAACCACTAGTTTGTTCTCTGTGTCTGTCTTTCTTTTTTGTTATATTCACTAGTTTTATTTTCTAGATTTCATATATAAGTGATATCATATAATATTTATCTTTCTCTGTCTGACTTCTTTCACTAAGCATAATACCCTTCAAGTCCATCCAGAGTATGAACTATTTTCATTAGCATTCATATCCAAATATTTTTATTTACACGAATTTATTTTTCTGTAACCCACATGTCACTTATAAATTTTCAAACTTAGGCATTTTTAAAGCTACCTTTTTGTTATTGCATTTAACCTAAGAGAGTTCAGATAATGTGTTCTATGTGAAAACATTTTTTGAAATTAGTTGAGATATAATTCAAGGCCTAGTATATAATCAGTTTTCTACTTGAGCTTGAAAAGAATGTGTTTTCCCATGACTGTGTATGTATGTATATATACCCCTTAAATCAAGGTTTTTAATTATTCAGTTCAAATCATCTTGTACTAATTTTTGCTGCTCAAACTATAAATTATTGAGAACATTTTAACTCTTTTAATGGAAAATTTTTCTTTTTTTCTTAGAATTCTTTAAAAATTTCCTTTAGATATTTTGAGGCTATGGCAATGGGTAAATGTAGTAGAGATATGTCACAGGCAGCTTTGAGCTCACATGCTTTCAGCTTAGCAACCAAGGAGAAAAGATTTCTTTTATTTCCCTGCTTTAGTTTTAAATGTCTTCCAAAGATTCTAATTGGTTCATTGAGAATCCAGTGATGTAGTAAAATAATTTTCAAGGATTTTAAATCGTGGCTCTTATACAAATGCAAAATGAACCCTTATCAAAGAATATTATCAATTCATTAGTAAGAGAACCAGTGAGATACTGGTTAACAAAGCATTTGAAGAAGGATTTATATATCCATCATGAAAAACATTAAAAAGATTTTTAATTTTTATATTGGATTATAGTTGATTTATAATGTGTTAGTTTCAGATGAATAGTAACGTGATTCAGTTATACATATCTCTATTGTTTTCAGATTCTTTTCTCATATAGGTTATTACAGAGTATTGAATAAAGTTTCCTTCAGTAGAATCTTGTTGATTACCTATTTTATATATAGTAGTGTGTATATGTTAATCCCAACCTCTCACTAAACAACTGTAATTTCTACTCAATACCTTGAATGCTCCCAGTTTTTTACCACTGGTCCTTTGTGTACTTCATCCTCTCTGCCTACTCTGGTCTTCACTTTTCACTGTAGTTTAAATATCACTTCTTCCTGCAGGTTGAACCCTATCTTAACTATCACCATCCTCTTTCCTTTTCCTAACACTGCATCATGTTTCTTTCCTACCACTAAGACAAAGATTTCCTTATTATTATTATTATTTCCCTCTATCTCACCCCAGTGTAAGTTCAGTAAGGGTGGGGACAATGATTCTTTGGTTCATTATTAATATTGCTAGCCTACAGCACTGTGTCTTTAATATGGTGGGTTC EMBV3_21437 TTCCTACCCTGACGTCTTCCAGGCATCAGAGCACATCAAATCAGAGCAGGGGAATGAGTA Gene GeneID:100297382|LOC100297382:XM_002698432:404_cdna Constitutive 0 NULL GeneID:100297382 26 GENE LOC100297382 NULL hypothetical LOC100297382 EMBV3_37018 AGTAGGAACCCAACCTGCCAACTGACACCTCGCTCTTGGACTTCCAGCCTCCAGAACTAA Gene BVV0101_065317 + 1 EMBV3_35420 GK000010.2:75637243-75783881 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33508 AGAATGGACCGCTTTCCAGAACCCAGAAGCCACATGCAGAGACCTGGCGTGCATCCCAAA Gene GeneID:512410|SPEF1:NM_001034422:1006_cdna Constitutive 0 NULL GeneID:512410 13 GENE SPEF1 C20orf28 MGC139446 sperm flagellar 1 EMBV3_24506 GAAAATGAAAGAGAAGTGCTCTTAGAAAAGTTTTTTGGACCATATACAAACAACACTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30079 CCTCAGGCTCCAGTCTCTGTTCCTCCACTAACCACCGATGATCTTCCTAAAATACAGTAC Gene GeneID:100298252|LOC100298252:XM_002698101:144_cdna Constitutive 0 NULL GeneID:100298252 25 GENE LOC100298252 NULL similar to integrin alpha X EMBV3_22912 AGTGGGCAGTTCTGTGATGTTCGACTTCAGGTTGAAAGCTGATAAGGAATTAGTCAAAGA Variant GeneID:514940|IVNS1ABP:NM_001046184:66_cdna 390^559 1 EMBV3_28931 GeneID:514940 16 GENE IVNS1ABP MGC134425 influenza virus NS1A binding protein EMBV3_26360 GGGAGTGAGGGACTAGGGAGAAGATTGTGAGGACAAAAGCCTGGTGGTATTCTGGATGTC Gene BVV0101_087255 + 1 EMBV3_39553 GK000015.2:38800772-38876121 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00064496 1 XLOC_039220 NonCoding TCONS_00064496 XLOC_039220 NonCoding NonCoding - 15:38821083-38821402 - TSS48239 319 1 0 0 0 0 0 0 0.000504600454600351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0606742817735812 0.636835642212449 -0.00758331923008102 0.904595463625675 ATTTAACACTCTAGCCTCTTTCTTTCTTAATATTGGCAACAATAACCACCACTTCACAGCCACAGTTATATCTTGGGCCTTCTCTGGACCTGGAGCCACTCCACTTAAGCTATCTTAAGGTCTAGTATATTATCATCTCCTGGCTCCCCAGCTCTCTCACTTTCACTCCCACCGTACCTCCCCCTTGACATCCAGAATACCACCAGGCTTTTGTCCTCACAATCTTCTCCCTAGTCCCTCACTCCCCTTAATATTTCCTTTTCTTCCCTACGCTGCCTAGATCTGATAATGCTGCATGAAAACCAGCCTTATTTCCCTC TCONS_00059038 TCONS_00059040 TCONS_00059041 TCONS_00059042 TCONS_00059043 TCONS_00059044 TCONS_00059046 TCONS_00059047 . 3' 20292 TCONS_00059038 TCONS_00059040 TCONS_00059041 TCONS_00059042 TCONS_00059043 TCONS_00059044 TCONS_00059046 TCONS_00059047 . 3' 20610 EMBV3_32295 TTTGGCCCTGTTTCATGACTTTAAACCCAGTGATTGAACCCAGGCCACCACCGTGAAAGC Gene GeneID:538029|HERC1:NM_001103282:106_cdna UTR3_Alt 2 NULL GeneID:538029 10 GENE HERC1 MGC142529 hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 EMBV3_16263 GGGCTCAGAGGTGTACAGGATGCTTCGGGAGCCCGAATGCACGCGCTGCGGCCACGGCAT Variant GeneID:515410|PDLIM4:NM_001034491:54_cdna 638^805 3 EMBV3_35065 GeneID:515410 7 GENE PDLIM4 MGC127818 PDZ and LIM domain 4 EMBV3_19726 CTTCTAGACCCTTCGTCTCTCACCTGACGTACTTACTACTAAAATGTGAAAACCTAGACC Gene GeneID:280740|CA2:NM_178572:3_cdna Constitutive 1 NULL GeneID:280740 14 GENE CA2 NULL carbonic anhydrase II EMBV3_04864 CCCAACTCCTGTATGAGTCTCCTCTCAAAAACCCAGATAAGGTGTTCCTGAAACTGGACC Gene BVV0102_281486 + 0 NULL GK000030.2:95953707-95957346 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245202 TCONS_00245201 TCONS_00245200 TCONS_00245203 1 XLOC_150657 Coding TCONS_00245203 XLOC_150657 Coding Coding GPR173 X:95932771-95956255 = TSS184109 5252 1 TCONS_00245203_6 373 0.0666412795125666 3 0.776476600093685 0.000325938761619201 0.000527563494439606 0.00016596116731685 0.000682518278038005 0.000411669422354966 0.000112108713792509 5.34591388580752e-08 0.000374991812665339 0.000127077554124856 4.50964023790199e-05 1.03294776270277e-11 5.53197801828174e-54 0.000131519250373618 0.000641264659557961 0.000623489072733559 4.10549238874892e-05 0.00010421028401455 0.000195714162730819 0.000368496794768803 0.00102417158947577 0.000329447615340777 0.000139052309211535 1.68734765723596e-06 3.50057713423148e-05 0.000764469744137524 0.00085211939223458 0.000601271574477899 5.72574837120911e-31 9.29987831266078e-11 1.94212475953041e-05 NM_001015604.1 GPR173 Bos taurus G protein-coupled receptor 173 (GPR173), mRNA. 0.0 3521 99.95 0.372048743335872 NM_018969.5 GPR173 Homo sapiens G protein-coupled receptor 173 (GPR173), mRNA. 0.0 4457 83.35 0.786557501904037 TCONS_00245203_6 sp|Q5E9H8|GP173_BOVIN GP173_BOVIN Probable G-protein coupled receptor 173; 0.0 768 100.00 0.997319034852547 1 coding 0 0 0 0 -0.823257575275083 0.0897330587763219 -0.0179753200805981 0.76487027199823 ATTGTCTGTCCTACCTCTCAGAGCTTTAAGCATCCCTCCCATATGAAAGCTTTTGAGAAACTTCCACAGACCTTTCTGCCCTGACCCCAACCACAGATCCCTCCTACCCCTGCTTCCCCTGAACTTTGTAGCCCGTGTGAGTTGCTCTCTGAGCGGCCTCTTAGGTACCTCTCCACACCTCCATGCGTGCCTCTCTTCAGCATCTCAGAAAAACTAGAGTCTGAATTCCCCAGCCAGCTATTGTCCTGGCAGCACAGCCACCTCGCCAGCCATCCCCACCCAGTCGGCCAGCCAGCCAGCCGGCTGCTCCCCGGACTCGCCAGCCCTCCCTCCCTGCCCCACCCCAGGGAGGACCAGGCTGGCGGCTGGGAGTCTCCCTGCCTGTTCTGCCTCCCTCCTTCCCTCCCTCTCCCTCCCTGCCTCCCTCCCTCCTCCGCCCGCCCCTGAGGCAGGGACCGTGCAAATCGAGGAGAGGGGGGACGGACAGGCCGGATGGGGTCCAGCTTAGTGCCCTGAGCTCCCCGCCAATGCCCTATCCACGTTGGGAGTCCCCAGCATCTTGGGACCTACATTTGTGTGAACTGGGGTGGTTCCCAAGCCTGGAGGGTCCCTCCGGCAGGCTCATAGTGCCCCTGTTTTGCATCAGGACCCCCCTCGGATGCTCTGAGCCACCCTCCTCAACCCGGATCTAAAACCCAGGACACAGCTATCAGGCCAGCCTCTCTCTCCACCCCACCCCCTCTTTCTGGCGTCCATCCCCTTCTCAACTCCACCTCTGCTGCTGCCTCTGGCTGTGGACCTGCACCTCTTCCCCATCCCTGAAGGCCTGGGGAGCGGGCTGAGCCTGGATGAGAGCTCCCCCAACCTGGGGCTCTCCCAGGCCATGGCCCGGGTGCTTCCAGGGAGGAGCCCAGGACCCTGAGCATCTGCTAGAGGCTTGGCAGAGGCCCCGCAGGGACCGTGTCTTCTGAGGACAAAAGGCGCGGCCAGCAAGCAGACAGGAAGGGGGAAGGGGGAGACCAGCAGCCAGGCGGGCAGACAGGCAGACAGACCAGCCCGGCTGTATCCACGGCAACAGAAGCAGGAGTGTCACTGGCTGCCAGATCACTGAGGGTCCCACAATGTGGCCTGGGCTGTGATTTATCCTGAGTGAGACAGCTTGAGCATCCTCCCTGGATTTCAAGACAGTCCTGCTGAGAGAGCCTAGGTGCAGCCCAGCAGAACAACTGATGGAGTCCCCTGGGGCCCATCGAGTACTGGACTGGCTGACCCCATAGGGTTGGGAGCAGCCCCTGCCCCTCAGTATGGCCAACACCACTGGAGAGCCCGAGGAGGTGAGCGGTGCACTGTCTCCACCATCAGCAGTGGCTTACGTGAAGCTGGTGCTGCTGGGACTGATCATGTGCGTGAGCCTGGCGGGCAACGCCATCTTGTCCCTGCTGGTGCTCAAGGACCGTGCCCTGCACAAGGCTCCTTACTACTTTCTGCTGGACCTGTGCCTGGCTGACGGCATACGCTCTGCCGTCTGCTTCCCCTTTGTGCTGGCTTCTGTGCGCCACGGCTCCTCATGGACCTTCAGTGCGCTCAGCTGCAAGATTGTGGCCTTTATGGCTGTGCTCTTTTGCTTCCATGCGGCCTTCATGCTGTTCTGCATCAGCGTCACACGCTACATGGCCATCGCCCACCACCGCTTCTATGCCAAGCGCATGACGCTCTGGACATGCGCAGCTGTCATCTGCATGGCCTGGACCCTGTCTGTGGCCATGGCCTTCCCACCTGTCTTCGACGTGGGCACCTACAAGTTCATCCGTGAGGAGGACCAGTGTATCTTTGAGCATCGCTATTTCAAGGCCAATGACACGCTGGGCTTCATGCTTATGTTGGCTGTGCTCATGGCAGCCACACATGCTGTCTATGGCAAGCTGCTCCTCTTCGAGTATCGTCACCGCAAGATGAAGCCTGTGCAGATGGTGCCAGCCATCAGTCAGAACTGGACATTCCATGGCCCTGGGGCCACTGGCCAGGCTGCTGCCAATTGGATCGCTGGCTTTGGCCGAGGGCCCATGCCACCAACCCTACTGGGTATCCGGCAGAATGGGCATGCAGCCAGCCGGCGGCTGCTGGGCATGGACGAGGTCAAGGGTGAAAAGCAGCTGGGCCGTATGTTCTACGCGATCACACTGCTCTTCCTGCTCCTCTGGTCACCCTACATCGTGGCCTGCTACTGGCGAGTGTTTGTGAAAGCCTGCGCGGTGCCGCACCGTTACCTGGCCACTGCTGTTTGGATGAGCTTCGCCCAGGCTGCCGTCAACCCAATCGTCTGCTTCCTGCTCAACAAGGACCTCAAGAAGTGCCTGAGGACTCACGCCCCCTGCTGGGGCACAGGAGGTGCCCCAGCTCCTAGAGAACCCTACTGTGTGATGTGAAGCAGGCTGGTAGGCAGACAGGCAGGGAGAAGGTCGTGGCCACCACGATGGAGCCAACAGAAGGGAAGAGGTAGGGCTCCATACGGGAGCCTTTCTTTCTGAGCTCCAGCCCCAGACCCTGGAACAACCTGGAATCTAGGCACCTTTGCCAACACCTCCCCAGGGCTAGGGACTGGGTGGGGACTGGGAAAGATGCATTTCTAGTCCTATGGGGCCTGTCTCCACCTCCTCCTCCTCCACTTCTACAGTGTCTCTCCTCTCAGAAGTGACAATTCAGAAAAAAAAAAAAAACTGAAAATGCAGGTTTTCCTACTCATAGCTGAGGAGACAGGCTTTCTTGCTCTAATGTCTCTCCTCTGACATTGTCCAGAAGGGGGAAATTTGTCCTGTAAAATAGACTTCTAGAGCTCTTATTGTCCCCTCTGCTCCCACGCACCCTCTCCTTCCAAGTCCTTTAGCAAGGTCTGGATGAAATTGATCTGCTGACGAGAGGGACCAAAGTGGGTGTTCGGTCCCCAGGGAGCAAGGTTTAATTGCTATGTTGTGTGCAATGTTGTTTTAGGCTAACCCTGGTCCCAAGGCCAGTCTTTTATCCATCCCTACCGTGTCCAGACTTCCCAATTGTTTCTTGAGCATCTGTTTGAGAAACAAGGAGGGGAGGGAGAAGGGCCTCTGGGATGGGCCCAGGTTAGGTGAAGAGCAGGATGCTAGCAATATGCCTCAAGCTGAAGAGACCTCAGCTTGGCTGCATTCTCTCAAGCTGCCTCCAGGATCACCATCCTTCAGCTCTTCCTGAGGATGGAAATCCACTCCAACTCCACTGAAGTCGATGTGGGTGCCATAAAGGCAGGAGCAGCACCCCTCCAGGGAAGTGTAGGGAGAAAGTCAAACTCCCCAGAATGGCTGAATCCCAAAGCCTGGGGACAGAGCAGAGTTGAACCCCAGAATTGTCTCCTGAGTTCATGCTACTCTCCTTGGTAAGTCATAGTGGTATAAGCTCCAAGGCACTGTGGACTTGAGTCCATTCCTCTCTGGCCTCTTTTTGTCCCTTAAAGCCTCAGGGGCCTCAAGTCCCTCTGTGGTAACCCTTGGCCTTCTGGGCCCTTAGCCCCCGACTTACTTGCTCTGAACAGCCCTTCCCCTCTTCTTCCCTCCACCATTACTTCCACCCCAAGTGGAGCAGAATGCAGCCAGATTCCCCAGGTGGGAGATCCAAAGCCTCCTTCCCAGAGCAGAGCCCACTCTGGGTTCACATCAAGTCTTATGGACTGGTGAGCCAAACTGGCATTCTTTGCCTGGTCTTTCCCAAGTTCTCTGTCCCCTTCTCATCTCCTGGGAGAGGGGGAGATCTGTATTTTTTCACCCCCTTTCTCTCCCCTATAGAAGCCCTTGTCCTACACTCCCTCCCTACCCTAAGACAGCTCCGGAACTGGGCAAGCCTTGACTTAAGCAAGAGGAATGGAGAAGGCACTCTAGGCAGGAGAGACATTAATGAGCCTGGTTATGCAGTGGCCCTGGAAAGGCAGGCCAGAGTGGCTGAGAGACTGGTATACAGGGGGGGTACCTGTTCTCTCAGTGATAGTGATGGGGGTGCCTTTCCCAGGGAGTGGGGTGGGGGTAGATAGGGTACATTCAGGAGGATTTTCCTCTATTTCTTTTTTCTAACTGCCTGGATTCACCATTGGATTTTGTAAATGGAAAACTGAAATGAACAATGCTATATTGGATGTTTTCTCTTTCTGTCTCTGTGTGTGGGTGGGTGTGTGCCCTATCTGCAATGACCATATGTAGGGGGGTATGGTCAAGTGAGACAGTGTGTCTGTGTGACTTTGTTGGGGCGCACTCTGGCCTGGGGCACACATGTGAGCAAATGCCTGTATGTGGAGACATATACAGTGCATGTGAGCACACATGTGCACATATGCACCTAATTGAGAGAAGAAAAAACAGTATGTGCCTGCAGCAGGAAGTAGAGTGGTCAGAGAGATGGAATTTGAAAATGATATGTATGGATGTAGCAAGAGCGTAGACTCCCATCTCAAAAGATCTTCCTCCCCTGGCCCAGGCTCTGAACATGGAGGACAGGATACTTGAGAATCCCATCTCTTCCAAAAGTCTGGAGCCCCCAGGTACCACTCCCAACTCCTGTATGAGTCTCCTCTCAAAAACCCAGATAAGGTGTTCCTGAAACTGGACCACCATGGAGAATGGGGACTGGTAATTGGGGATCAAACTTGGGGGAACTGTTGGGTTAGGTAATGCCCCCCACACATATACACAAAGTAATAGCTTATGGAGGGACTGCTCGGTCTGGGATAGGAGCCCTTCAGAAGGATCCACTGTATACAGCTGGGATTTTGGTAAGCTTTGATTAAATTCAGAGGGATGGATGTCATGGGGAAAAAAACAAACAAACAAGCCTGGGAGTCTCCCCAGCCAGCCTGTTCCCTGGACGCTCAATTACTTTACTCTATGAGATGCACAGAATTGAGTTGACCATATTCCTCAGTTCTTGGCACACTGTGTCATCATTGGTCCATATGAAGCCCTTATATTCTTTTTTGTTTTGTTTTGTCCACTTCATCACCCATCCCTAATACCATCCCCCCTCCCACATAGGCACCCCACTCTTGTGTATTTAACGTGTGTTTTTCCAATCCACCATTCATATGTTTTATTTACATATATGTGTATATGTGGAAAATGTATGGTATTGTTATGTTTTAATTTACATAAACAGTATTGTACTATAAATCTTGTTCCGTTTCTTTCTTCACTCAACATTCTGTTTTTTGAGATATCCAGCCATGTTGCCGTGTGTACACC EMBV3_21082 GCCAAACCAGATTTCTTGAAGGTAGCAAAATCTGGACAAAATTTTGTTTAAAATCAACTA Gene BVV0101_049739 + 1 EMBV3_14193 GK000006.2:29354862-29447013 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01492 AGGCGGTCGCGCCGTCTACGTCGAGGAGTATGTCACTGTGCCCGTGGGCTGCACCTGCGT Gene GeneID:614982|IL17D:XM_002691866:179_cdna Constitutive 0 NULL GeneID:614982 12 GENE IL17D NULL interleukin 17D EMBV3_00762 GGAAGGGCTAGATTCTTTTCCAGCCTTTGTGAACCAATTTGTGGTCCTGGAGTGGTGTGC Gene GeneID:783760|EIF2B5:XM_002684878:87_cdna UTR3_Alt 2 NULL GeneID:783760 1 GENE EIF2B5 NULL eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa EMBV3_30995 TGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAATGAAAGTGAACGAC Gene GeneID:537791|AEBP2:NM_001083485:44_cdna UTR3_Alt 2 NULL GeneID:537791 5 GENE AEBP2 MGC142819 AE binding protein 2 EMBV3_10273 CTCTGTATCAGAACAAAAATAATTCCTGTGTGGAGGCTCCCTGTCATTTCCTTTCCCCCC Gene BVV0102_380439 - 1 EMBV3_21233 GK000005.2:5612122-5812483 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00197073 1 XLOC_118738 NonCoding TCONS_00197073 XLOC_118738 NonCoding NonCoding - 5:5691809-5694030 - TSS146641 2221 4 TCONS_00197073_3 66 0.445745159837911 1 0 0 0 0 0 0 0 0 0 0 0.000118562977363082 4.22587583934318e-05 1.60994381703917e-06 0 0 0 0.000107025546613363 0 2.25942273891914e-05 0 0 0 0 0.000582413894882475 5.28377484879589e-05 0 0 0 8.6494124091159e-06 0 0.000119108020497274 XR_239764.1 LOC100848447 PREDICTED: Bos taurus uncharacterized LOC100848447 (LOC100848447), 1e-60 239 84.55 0.0954524988743809 0 noncoding 0 0 0 0 0.111092891356274 0.352776292542111 0.00923978948733804 0.911044236916268 CACATACACACACACACAGCCATATGTAGGAGTGATTTTTGCCTACACGGTGAAATTTATAAGTGGGGTGGGGTAGAACAGGACCATGGATTTTTTTTTCTTTTTATATCCTTACGTATTTTGTTTACAACCTACAACCTATTCTTTTAAGTTCTCTGCATCAATTTCTCTCTCTTTCCTTTTGATTTTTTTTTCCGCAGTCTTTCCTTCTATTAGTCAAACTGTATTCTCAGTTATAATAGACCTATCCACCCACTTAGTTCACTCATTCATCCCTTAATCCACCATTCGTGATATGACAATTCATTCTATTGTAGTCAACTGCCACAGAACTTTGAAAAGAAAGGACATGATTTCTTTATTGATAGATCGGGTAGCTTGCTTCATAGCCCAACTTTCTCTGAGCAAAGTTTAATTGCCAAGAGAGAAACTCCTTAGTGGATAATAAAACCCAAAATGAGTGCTTCTGGGCAGCCCCTCTTCACACCTCTCACCTCGCACCCCGCCACACCTCCCGGGGGCTGGGAACCGGCTATAATATAAAAAAGAGCAACAGGCTTCACTACATTCAGAGGTTGGAGAGTATGAGTCATAAACTGTTCCTCTGCTTTTATTTTTTTAAAAATTCCTTCCTGTCTTGTATTTCGCCTTCTTCTTCTTACTCCTATTGCTTTGCTGTCTATATGTGTTTATTTTCCTTCCTTCCTTTTCCACCGTCTACTGTCTCCACTGATGTCAGGACCAGGGGTCCCTGGGCATCGCTGATCATCAGTAGTAGCCCATAGTGGGACCAGTGCCCTGTGACAGGCCCTGAGCCAATCCTCTCTGTTTAGAGCAGTGAGCTGGGACAATGAAGGAGGCAAATACTGAAAGACAGAGGGGTGCCTGGTGGGAGCTATACTCTATGGAGCATGACTGCAAAGGGATGCAGTGAATTTTTTTTTTTTTTTAGCAGGGATTTATAAGCCAGTTACAAGAATAAATGGGCTTCCCTCGTGGCTCAGAATCAGTCAAGAATCCACCTGCAATGCAGGAGACCTGGGTTCGATCCCTGAGTTGGGAAGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTACTTTTGCTTGGAGAATTCCACAGACAGAGGAGCCTGGCAGACTACAGTCCATAGGGTCACAAAGAGTCAGATATGACTAACTGACACTTTCACTTTATAAGAATAAATATCCCCAAATGTTTGGAGCATTGTTAATAAAGGGTTGAGCCTCTCAAGGTGATTGCTTTGAAATGGACAACACTAATTCAGCTCTGTATCAGAACAAAAATAATTCCTGTGTGGAGGCTCCCTGTCATTTCCTTTCCCCCCACGTGCCAAACACAATTCTGACTTGATCATTATGGCTGCCTGCCCTTCCTGCCACGGTTCTGGACCTTTCTGATAAAGAATGAGGAGACAAAGGGAGAGACGAGACGAGAAACAGGGAGCCAGGGAGTTTTCCTGGGAGTTAGCTGAAACGGAATCTTAACCCCCAAGGGTGACAGCATTAGTAGGTGCGGCCTTGGGGAGGTGCTTCCGTCCTAAAGGAAGGCTCAGAAGGGGATTACTGCCCCACCATAACAGACCCACAGAGATCCCTTGCCCCTTCCGGCGTGTGAAGGCCCGGTAAGAAGGCACCAGCTTCAAACCAGGAAGAGGACCTTCAGAAAGTCACTCTATGCAGCAGCTTGATCTTTGACTTCCCAGCTCCAGAGCTGTGAGAAATAAATTTCTGTGGCTAATAAGCTACCAAATCTGTAGTTATTTATTTCTTTTTTTATAGCAGCCAGAACAAACCAAGACAAGAGTCCTCAAAACAACCTCTCTCCCCACCAAGTGTGTTTCAGTGATTCGCTGGGAGGACACTGTCTTATTCAAGGCTGAGAGTCCAGCAAAAGGACGCAAAGCAAAATCAGCAAAGAGAAGAGCCACGTGGGGCAACGCTTAGAGGAAACCAAGCACGAGTTTCTAGGAGTCCTAACTCACACAGGACGCACTTCATTCTCCCACTGCTGGTCATGGCGACACGGGAGAAGTGCTGCTCTCAGGAGGAGCGCAGGAGACTCGGTGCCCGGCACTGTCCCTGGGGGCTGGACACAGGCGCTCTGCAGAGTGTGTACCCAAATTCCAGACTCCAGAAGGGAAAGCAGGTGGTCAGCACAAGCCACATTACTTCCCAAGCAGTTTAGGCCCAGGGAACC TCONS_00193883 . 5' 79116 TCONS_00193883 . 5' 79116 EMBV3_39288 CGAGCCTAGAGGATTTGATCGTTTTTCCTGGTTTGCTGACTGTGCCATATTGTTGTTGAT Variant GeneID:512804|C9H6ORF70:NM_001105255:12_cdna 746^860 1 EMBV3_09001 GeneID:512804 9 GENE C9H6ORF70 MGC148787 chromosome 6 open reading frame 70 ortholog EMBV3_05123 CTGCTATATCACATGGAGCCCTTGCCCGAACTGTGCCAATGAGCTGGTCAATTTCATCAC Gene GeneID:504505|APOBEC3B:NM_001077845:22_cdna Constitutive 0 NULL GeneID:504505 5 GENE APOBEC3B APOBEC3F APOBEC3Z2 APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B EMBV3_43216 CCACGCCTTGGGAGGCAGCGTCAGACTCGATGAAACGACTACAGATTGGCATGATAGAGG Gene GeneID:534352|MRPL18:NM_001034608:25_cdna Constitutive 0 NULL GeneID:534352 9 GENE MRPL18 MGC128595 mitochondrial ribosomal protein L18 EMBV3_41822 TCCACCTACAAGAAGATGGTGGAGGACTACTACAAGGGGATCAGACAGATGGTGCAGGTC Gene GeneID:508175|PLXNB2:XM_002688002:141_cdna Constitutive 0 NULL GeneID:508175 5 GENE PLXNB2 NULL plexin B2 EMBV3_31059 ATGGGATCCATGGTCTATTTATTCTCCCCCAGCTCCCCTGCAACACAGACATTATCCTGG Gene GeneID:505915|PPP2R5B:NM_001075232:518_cdna Constitutive 0 NULL GeneID:505915 29 GENE PPP2R5B MGC143454 protein phosphatase 2, regulatory subunit B', beta isoform EMBV3_18284 ATGCTTCCTTGGGACTTGGTGTTCTCGGCTTGTGGGAAGGGCCATGTCCACAGCTCTGCT Gene GeneID:526946|LOC526946:XM_002699720:121_cdna Constitutive 0 NULL GeneID:526946 X GENE LOC526946 NULL similar to rCG43868 EMBV3_05929 CCAAGACTTTCACCCTGAGTAGCCCAGCAACCCCTGAATTGATTAGAATGACTTGTGTGG Gene GeneID:518393|LOC518393:XM_002685502:17_cdna Constitutive 0 NULL GeneID:518393 2 GENE LOC518393 NULL similar to aldehyde oxidase 2 EMBV3_18890 GATCACTTAAAGGGGATTCTCAGGCGGAGGCAGCTGTACTGCAGGACTGGATTTCACTTA Gene GeneID:100336738|LOC100336738:XM_002691847:125_cdna Constitutive 0 NULL GeneID:100336738 12 GENE LOC100336738 NULL fibroblast growth factor 9-like EMBV3_14038 GTCGGACCAGCATGGCAGGATTCAAGCGAGGGTGAAAAAGTGGCAGTAAAAGTTATTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12636 CAGAAATCCTTTACTTGTACACAGCTTTCATTTCCTATGATTCAACCTGCCCTCTCCTTT Gene BVV0101_003660 - 1 EMBV3_16692 GK000003.2:15353405-15355685 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12505 CCTATGCTTCTACTAACTAGCCTCGAGATCTTAACCGCTCTGTGCCTCAGTGTTCCCATC Gene BVT0101_002299 + 0 NULL GK000030.2:92973211-93039791 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245135 TCONS_00245137 TCONS_00245139 TCONS_00245109 TCONS_00245141 TCONS_00245142 TCONS_00245125 TCONS_00245136 TCONS_00245138 TCONS_00245107 1 XLOC_150625 Coding TCONS_00245137 XLOC_150625 Coding Coding CLCN5 X:92938155-92979892 j TSS184063 9021 1 TCONS_00245137_7 747 0.0417913756789713 12 0.78414318573893 0.00023655484798163 0.00047070172830495 1.52557409042125e-05 0.000183234639389912 0.000593661101826782 2.10855363202434e-20 0.000142473191482951 0.000162441232988559 2.7068538362627e-59 0.00011370158379517 1.86181230490613e-05 3.61415829607586e-05 1.43177053192973e-09 0.000156856002275213 6.49301214349933e-19 0.00680810421738018 0.000790195244570639 0.00375579582036828 0.000188287197666738 0.000736731531086573 0.000277989805481338 0.00346317136574888 0.00237867082502161 0.00265488871755172 0.000668870449170008 1.96366581339108e-09 0.000396403865074722 0.000444910701142838 0.000336024449832775 0.000766197804842889 XM_005200762.1 CLCN5 PREDICTED: Bos taurus chloride channel 5 (CLCN5), transcript 0.0 5339 100.00 0.328012415475003 NM_001282163.1 CLCN5 Homo sapiens chloride channel, voltage-sensitive 5 (CLCN5), 0.0 6893 83.91 0.702250304844252 TCONS_00245137_7 sp|P51795|CLCN5_HUMAN CLCN5_HUMAN H(+)/Cl(-) exchange transporter 5; 0.0 1433 97.99 0.997322623828648 2 coding 0 0 0 0 0.0192588815970782 0.874491576886046 0.0398340680667013 0.590662420106494 GTCCATACTCAGCCTTCAGAAATTAGTCAGAATTGCCATTTAAGTGGCCAGAGAGTAGGTCATACAATGGTGGAGGAATAGGTTCTTCAAATAGGATGATGGACTTCTTGGAGGAGCCAATCCCTGGTGTGGGGACCTATGATGATTTCAATACAATTGATTGGGTGAGAGAGAAGTCTCGAGACCGGGATAGGCACCGAGAGATTACCAACAAAAGCAAAGAATCAACATGGGCCTTAATTCACAGTGTGAGCGATGCTTTTTCTGGCTGGTTGTTGATGCTACTTATTGGGCTTTTATCAGGTTCCCTAGCTGGCTTGATAGACATCTCTGCTCACTGGATGACAGATTTAAAAGAAGGTATATGTACATTAGGAATCTGGTTTAACCATGAACACTGTTGCTGGAACTCCAACCATGTCACCTTTGAAAATAGAGACAAATGCCCAGAGTGGAATAGCTGGTCCCAGCTTATCATCAGCACGAATGAGGGAGCCTTTGCCTACATAGTCAATTATTTCATGTACGTCCTCTGGGCTCTCCTATTTGCCTTCCTTGCTGTATCTCTTGTCAAGGTGTTTGCACCTTATGCCTGTGGCTCTGGAATCCCTGAGATAAAAACTATCTTGAGTGGTTTCATTATTAGGGGCTATTTGGGTAAGTGGACCCTGATGATCAAAACCATCACACTGGTACTGGCAGTGTCATCTGGCCTGAGCTTGGGCAAAGAGGGCCCCCTAGTGCACGTGGCTTGCTGCTGTGGGAACATCCTATGCCACTGCTTCAACAAATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCAGCCGCTGCCGCTGCTGGTGTATCTGTAGCCTTTGGGGCACCTATTGGTGGAGTATTATTCAGCCTAGAAGAGGTCAGCTACTACTTTCCCCTCAAAACACTGTGGCGTTCATTTTTCGCTGCTTTAGTGGCAGCATTCACTCTACGCTCCATCAATCCGTTTGGAAACAGCCGCCTGGTTCTATTTTATGTGGAATTTCACACCCCATGGCATCTCTTTGAGCTTGTGCCCTTCATTCTGCTGGGCATATTTGGTGGTCTGTGGGGAGCTCTTTTTATCCGCACTAACATTGCCTGGTGTCGGAAGCGGAAGACTACCCAGTTGGGCAAGTATCCTGTCGTAGAGGTTCTTGTCGTGACAGCCATCACTGCCATCCTGGCTTTCCCCAATGAGTATACCCGAGTGAGCACAAGTGAGCTCATCTCTGAGCTGTTCAATGACTGTGGCCTCCTGGACTCCTCCAAACTCTGTGATTATGAGAACCGTTTCAACACAAGCAAGGCGGGTGAGCTGCCCGACAGACCAGCTGGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCCTTGACACTCATACTGAAAATTGTCATCACTATATTCACCTTTGGCATGAAGATTCCTTCTGGTCTCTTTATCCCTAGCATGGCTGTTGGTGCTATAGCAGGTCGGCTTTTGGGAGTTGGGATGGAACAGCTGGCTTATTACCACCATGACTGGGCCATCTTCAATAGCTGGTGCAGTCAAGGAGCGGATTGCATCACCCCTGGCCTTTATGCGATGGTTGGGGCTGCAGCCTGTTTGGGTGGGGTGACTCGGATGACCGTTTCTCTTGTTGTCATAATGTTTGAATTAACTGGTGGCTTGGAATACATTGTGCCTCTGATGGCTGCAGCTATGACAAGCAAGTGGGTGGCGGATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACATCCGTCTCAATGGGTACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTGGAAGATGTAGAGACCATAATCAGTGAAACAACTTACAGTGGCTTCCCAGTGGTGGTGTCCCGGGAGTCCCAAAGACTTGTGGGTTTTGTCCTCCGAAGAGACCTCATTATTTCAATTGAAAATGCTCGAAAAAAACAGGATGGAGTTGTGAGCACTTCCGTCATTTATTTCACTGAACATTCTCCTCCAGTGCCACCATACACCCCACCTACCCTCAAGCTTCGGAACATCCTGGATCTCAGCCCCTTCACTGTGACTGACCTTACGCCCATGGAGATTGTGGTGGATATCTTCCGCAAGCTGGGACTGCGGCAGTGCCTGGTTACACACAATGGGCGATTGCTTGGGATCATTACCAAAAAGGATGTGCTAAAGCATATAGCGCAGATGGCGAACCAAGATCCTGATTCCATTCTCTTCAACTAGAATCACAGGGTTGTACTGGATATAAAACAGGAAGGACATTGCAGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCTACATTTGGGTGGTGAAGTTATATCAGTGTGTTGTCTCTTTCCTGCAAATTAACCAGTTGCACTACGTAATCTCTGGAAATTATTCTTCTCTTTAGGAGAAAATTCTATTAGGCTTCTGTGATATTGCATTAGGAAGATTTCATGAAAGAGTAAACAAGATTGCTATGATTTAATTCTTTTCTTTCTTTTTATTTAAAGATTTTTTTAATTTAAGACATAATTGTTAGCCAATATGCAATCACTGAAAACTATGCAAGAAAAATTCCAGATGTCCTGACCTATAGCCTGCAGGAAGCTCATGAAAAAGTCACTTTTTTGGACTCTTAACTGTCATTGGTGGAAAATGAAGTGTAAACTAAGGGGCTTTGCTTTTCCAGCCACAGGAAGGAAAGCCAGAAGGAAAATAGTAATGGTATTTTCCAGACTGTGAATTCAGTTCAAATATTATCTTGTTCCTGTTACAGTATTTAGCATTATTAGTTTCGTGTGTTTATGTATATGTTAATTTTAATGTCTGATTATAAGACAATGCTGCTTTGGTTAATCTCCTCTAAGTGAATTTAAAGAGATTAACTTTTATAGCTTGCTTGTTCCTGGTACTCTTTTTTGACGTGCACAAAGATAAGTTATAGAATTTTCTCCTTGTCTGCAAATAGGCTAATTTTTCCAGGTGGTCTTTGTTAGCTAGTAGACAAAGACTTGGCCATGAATTTGTTAGTAACAAGGAATGATTTCTCCAGCTTCCTTGAAATGATTAGTAAAGTTCTAAGCAAAGTCAATGACTAGGTCTTTCACATTTTTGTGAGGTCCCAACTAATCCTCTTACCCAGATGCCACCTCCATGAGTGATGGTGCTTTCGGCTTCTGGAATATAGAAGAGCAGTAAAGGGAACCAAATCTAGACTGCATACTGGTAAACCAGGGAAGATTCCAAGCTGTATCTGTGTTTTCATGCATTCCTTCGTAACAACCACCAGTACTAAAATGACTGGGCACTCTTGCGTCTTCCCAGTGTTAAGTACATTTAACAGGCCAGTGTTTTCCCCATGATGGTGAATTTAGGCTTGGGAGTACTTTCAGATGTATTCAAGGCATTGGAACAGGATAGGCAGCTCTGACTCCCTTGAGGCTTCTTAGACTTCTAAATAAAATGCAGAACCATCCTGAGACCCAGGGGTGTGGACAAGGCCTGGTGACACCTAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCCTACCACCTCTACTGCAGTAGAAAACATCTAGGGACACCCGGTGGAGCTACAGAGCCACCACCATCATTCCAACTACGTTTTCTACATGTTTACCCACATGCTGTTGTTTCCCCTCCATTCTTCTCCCTTTTCCATGCCTTAGTCCTGAGTCCTCTCTTTGGGATTGAGCACTGTGCCCAGTTAATCATTCCTATTACAAAAAGATAACTCCTGGAGCTAAATTGTAAACCCAGCCTCCAGAAGCTTATAGCCCATGGACCAGAGAGGCAACACGCAGCCATTTGCTTTGCTCTATAGTCCAGTAGCTACTGCCATACCTCCATTCCCACGCTGATGCCCACAGCAGTGAGACTCAAATGCTAGGGGAGAGAGCTGAACCTTTCCCATTTTCCAAGTCTGTTCCCAGTGCTTCCCACCATCCTTCCAGCCTAGAATCAGCAGTCATTCAGCATAGCCTTTCCTACCCTCTGTCTCCTCTGTTCAAGCACCTCAGTGTACCTCATTTTAAAAGTTGCCGATCTCTGAGTCTAGGATTTTTTACCCCTAGTTCTTATGTTTCCAAAATCTGAAATTCTTTTATTGCCCAGAACTAGGGAGCCAAGGCTTATTTTGATTTTTAGCTTTAAAGTATCAAGGCAGTCACCAGAGCTTTCCCTTTAAATATAACACTCTAGCATTGTAATGAAAAAGAAAAGATCCTCCCTAGGTTTTATTACAGTATAGTCATGACTCAGTAACTTCACAAGGGACAAGTAGGTCATTTGTCCCTTCTTTGCCACTGATTCCCTCAAAAGAGATGTGGCTATTTGCCCTACCACCACATCTGTTGTGCAGTAGTCAAAGTTCTTCTGTGTGTACTTCTGGTTCACTACCTATCTCTTCTTATCAGCCGTCCAACTAAAGTTTGCAAAACAGGAAATGTTAATATTTCTGGTATTTGATGACAGTCAAAGGTTTGGTCACATTTCTTAGGGCAGCGGTGATATGGAGGGTATGTAAGTTTGCCTTTGTGTTTCTTCTAGGCTCTGTTTTTGATTTGAAACAGATGAGCCAGTGTTCAGGTGCTACTTCAGAGAATAAATTCAAGAAATCAGATAATACTGTGCCAAGGTGTACTTTCTAGATGCTAAGCACTGATTGGCCCTCCAGAGAAAAACATCCCTTTGATACCTCACTCCTAGTAAATCTCATTCATTAACCTCAGCTTCTCAGGAATCCTTGTAACTATATGCTAAAAGTACCTGTAGTTTATGATATCCATTATATGTCCAGTCCTATGGTTTGGCTCAAAGTTTGGCTAATTGTGGTAGCGCTCCCTGCTAGACTGCTAGCTCAGCACCTTAACATTCAGAGTTTCTTATCTTGAGGCAAAGGAAAATGTTCTTTCTGCCACTGCCAATTCAGCAGTTAGACATCATTAAACCAACAGAGCTGATATAGGGAGGTCTGTTAGTAGCCAGAAATGGTCAAATACCTCAGTGGCAAAAGACTGGGAGACCAGTCTATTCTGGTATTGAGAGAAAATTTCCCAACACAAGGGAAGGATTTATAAAATAATGCCAATAAGCACTTCGAGAGAGGGTTTTCCAAAGCAAAATATCTGTAGGCATCCAGCCATGAAGGGAATGAGTGTCTAGATTTTTTTTGAGAGGCTAGATTTTAAAAAATCTAACAGCTATATTTTGTATCTTCAGATCTTCAGTGTAAAGAATTAAAGAAACTGGAATAAAGCTGAGGCATGTTTAGATATACCATTGGCAGAAGCAGGGAACTGACTGAACATGCAAAGTCATGGCCACTTTTAAGATCATTTCTGTTAGTTCAGACACTCTCCTCTTTTCTGGCTCCAGTGTCCTTCTGGCTCAGCCCAGCTGGAGTAGAGGTGGTATAATCCACAGAGCCCATGTCCTCTGGTGGATAATCCGACATTGACAGTGCTTTGGATGTGCCAGCTGGCAGAGCAGTCAATCTGTTTGCTGCTTGAACTGCAAAGGAGTTCAGTTGTTTGGACACCAGAGACTGAATCTGAACCCTTCACAGAAAGAGCAGAGAACAGCATCAATTTCTCTATCAAGTCTTCAATTGTGCTTGACCACAAGAATGATAAATTAACGGGGACTTTGTGTGGTCTAAGACTGTGAAGTAATTCTTAACTATGAATTTATGAACCTATTCAGGTGGAGGGGAGGAGCAAATACATTTTTTAAAAACAACGTGCAATAGAGTCCAACAGGGAAAGTAATCACCACTGTATGTTTTAAGTATTTGAATCAACTGTCCTGGTTGGGTCCTGACCTTGGTTTGTTTAGTTAGGTGGTGAGTATACCCCATGATATCTTTTGGTTTTGTTTTTTTAATCATAAGGAGTGCAGTTTTTGAGGTTGAATATTTAATAAATGATAGTCAAGACAGTTATTGAAATTTTGAAATGGCCAGTGTGTTTTATATTGCTAAAGTACTTACTGGTGATGGACCACATTGTATTGTGAGAAGCTGTTTTACTTTCATCAGATCAGAACCATATGCAGGCCACTGTCTGTTCAGAGAAAGCAGGAGAGTGTCTTTCATGGTGGTACATAGAGTATTGAGCTCTTGAAAACCCTGAGAAAAATTAAGAGTTTAGAAAGTAAAGGGGAGGTGGAATGGTGAGTAAAAGATGTCTAAATATGTGGTCTGAACTTAAGTGTCCTACAATCTTGATTTTTTTTTTTAAACCACCTCTGGAATTACCTGGATTCCCTTTGGAGAGAGGGTGGAAAGTTATGGTAGTGAAAAAACCCTAGTAAGAAAATATATGAGTTCTTGTAAGATGGTGGGAGGAAGGTCATTCCATGCTCCAAGCCAAACACCCTGACATTTATTAAACTGCTTAATTATGTGCCTCAAGGGGAGAATAGTTAGTAGTCGCTGAAAGAGCAGGCTTTCCAAACAACATAGAGGCTCAAAGCAGCATTTGGTTGGAGGCAGTCTACTTTTATGGAGAGGGCTGACCCAAGACCAGACATCTGCTCATGGAGGAGGGCCGCGTCTCCTGCCATTGCCTAAATGATAAGCTTTTGGTAGATTATCTTGAATTTTGATAGAAAAGTTCTTTAAAAATCTATGTCGTTAGCCTCCTTGGTATATGCTTATTCTATATTAAAAAGAAAAAAGTGACGGTGTCTCAGAGCTCAGGGAGCTTTGTAAATTTGAACTGAAATTGGTGTAGTAGACCTGTGGCAACCACTCAACTGTGCTCTGCCTCAATTTTGATTGCTTGCCCCAAGGGGAGACTTTCTTGGACTAGTAGGTGTTAGCAACTTCAGGTCACTCCCCAAATGTTTGCTGGTCACAATCTCATTTCTAAACATCTGCATCTGGGCAAAGTTTTGAAGTGACATAGGGAGCAAAATTGGTTTTCCACCATGTAACCTTATTTTGCCAAATCACCCAAGAAAGAAGGAAAGTCTGTGATGTGTGGAGTTTGCATTTCTTGGATGGAACCTATCAGGTCATCCAGTTCAATCCTGCAGTCATAAATTCCTACCTCTTAAGTTCCTGCCAAAAGGTCTTCAGCCTCTGTGTGCACACTCATTGAATGAATGCCTTGCCTAAAGTTCAGCCTTTTAAGGGGAAAAGGCGTGTGGTAGTATAAAATGTTAGGGTTTAAATAAATGATCTCTGCCTCTCCTCCTCTCTCCTGTCTGCCCCTGTCTCTCTGTTTCTGTCTCCTCCCTGCCATGCCCTAAATTCAAAATTTTATCATGTGTTATAAGTGTATTGTTTTGAATATGGACCTTGGAAGAGGGAGAGGATCATTCTGAGAGTAGAGAATGACTTCTGAGTTGATGGAGCCAACAGGGCTTTGCTCTGCTTTAGGGGCTAAAGCCAGTGATACCTGCTGGCAGTGTCCGGGGCTTTAGCATCTCTATGCAGACATGTGAAATATTCATTGCTAAATGTTATTCTCAGCTATTACTAGTCCAAATCTGTTGAAAGTCAGAGGCGATCTAGAACTTGATGAGTGTAATGCCTCTTGGCAGAATGAAGGTGAGGGAGTGGCCTGGGTTGATTTTGTCAGGGTGGGGATGTTTAGCCTCATTATCTTTCTGACTGTACCTCAACTATATGGTCCTTCAACAGTGCTCCTCCTCCTCCATTTTACTTTATCCCTTATTCTCTCTCTTTCCCCTTGTCCTGCCTTTTTACTCCTCAGATTTTAATAAATATTTACTTTTTTATTATATATTTGGTCCCTTGGGACTATGTAGTGATTATAAATTGAATTCATTCTAGGTAAAAAAAATATATATAGTGTGTTTAATATTTTGTTCTTTTAAACTGTCTTTTGAAGCTATGCTGTTAACCAGGTACAGGCCAGAAAGGAGTTAAGCCTGATGAACAGCACCTGGTCATGTCACCTAGGGATGCCATTGATGTAATGATGGTGATTCTTCTTCATTTGACCAAGGCCAGCCTCCTCTTCTTAACCTCCAGTCATTTCTGGCTGTGGGAAAAATACCAGCTGTCGGGTGAGCCAGTGAGGCCAGGATGATCGGGGGGGCTGGTTCCAGCCCATGGACCATTCTATGAATATCTCTGTAGTGAGCTCATTTGTAGGGCTGGCTTCAACTGCAGTAGCCAAAGAAAACCTGTCTGACTCAAAATTTTAGTTCCTGAGAGTTGGTAAAAGTTCAAATGAAGCTAAATACACATTATAGACATCAGCAGTAGCTTAGGTGTCTAGACCCTAGAATCAACCAAAGCTAATAGAGCCTGAGTTTCCATAGGAAGCTTGGTGCTGAGCTGTTCAGAGCAATTATTTATCTGAGTGCTGCCAATGCTTTAGTCACACTTTCTTAGCTTTATTGTAACTTTTAGAGATGTTGGTCCCTGTTCATAGGCGCAGCCTGTACCAAAGCTATGGCTTACTGCACACTTCATTCTGCTCCCTGGTCAAGCATAGCAACATAGTTTTAAAGGAAAGATGTGAGCTGGGGAGTTAGGAGACCTAGTTTCTATTCCCTATGCTTCTACTAACTAGCCTCGAGATCTTAACCGCTCTGTGCCTCAGTGTTCCCATCTGAAAAATGGGGATAGTGTTAATTGCCCTACCTACCTCACAGGGTTGTTGTGAGGATAAACTGAGACAATGAAAGGAAAGTACTTTGACAAGTAAGTGCTATGCAAATTGTAAGAAATGGAAACAATCATGTTACAGGCAATGGAATGGACTTTGGCAGAAGGGTTAATGGGATTGTCCAGCCCTTTCTCTGTGTGGCTTAAACCCAGGTCGCCATTGCTTTATACATTTTTCACTTAGCACAGATTTGTAATTATGCATGTAATAAAGCACAGCCTTATCCAATT EMBV3_40437 TGACACTCTGTTACTTCCTGCTAGCCATCAGCATGAGCCCTACTGCCTAAACACTATTTC Gene GeneID:613423|UBE2W:NM_001099122:64_cdna Constitutive 1 NULL GeneID:613423 14 GENE UBE2W MGC165835 ubiquitin-conjugating enzyme E2W (putative) EMBV3_31877 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34333 CCTGCTAGTTCCCGACAGAATTAACGGCACAGCCAACAAGATGAACGGCGCTTTGGATCA Gene GeneID:777790|CUGBP2:NM_001078165:17_cdna Constitutive 0 NULL GeneID:777790 13 GENE CUGBP2 CUGBP2 MGC137690 CUG triplet repeat, RNA binding protein 2 EMBV3_10980 GGCACACTGAACACTGAAGAGTCAATCGTGAATTTTATATTCTTCTGTTTTATAGTTTTG Gene GeneID:281067|CFTR:NM_174018:18_cdna Constitutive 0 NULL GeneID:281067 4 GENE CFTR NULL cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) EMBV3_13914 TCCATTTTCGCTGTCGATTTTTATATCCTCCTGGGGGAGCAGAAGAGTACAGAAATGTGG Gene GeneID:516874|TFB2M:NM_001038127:44_cdna Constitutive 1 NULL GeneID:516874 16 GENE TFB2M MGC133999 transcription factor B2, mitochondrial EMBV3_07051 TCATCGAAACTCCAGAACAAACATCAAAAGCTTGTCAGCTCATCTGCAGCTTACATTTAC Variant GeneID:538774|SUZ12:XM_002695636:57_cdna 387^455 3 EMBV3_04082 GeneID:538774 19 GENE SUZ12 NULL suppressor of zeste 12 homolog (Drosophila) EMBV3_31050 AAACATGTGTGGGGAAAACAGCTGAAGGGTAATGCTGGTTCTCTAGGCTTGGTTCCCAGC Gene BVT0102_321459 + 1 EMBV3_34044 GK000003.2:15033380-15093503 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21878 AGGGATTCCTCAGTTTCAGCCTATTTCTGCTTGATGGGATTACGTGCCCTGTGTTGGCAG Gene GeneID:514131|BCNT2:NM_001077919:100_cdna UTR3_Alt 2 NULL GeneID:514131 18 GENE BCNT2 P97BCNT2 bucentaur-2 EMBV3_17656 GGAAGCGCAGTCATCTCAGTAGGGGGCATTCTGGATTCATTTCTGCCCCTTCCATTAGCA Gene GeneID:783354|HRH4:XM_002697718:30_cdna Constitutive 0 NULL GeneID:783354 24 GENE HRH4 NULL histamine receptor H4 EMBV3_04672 TGAAGGCTCCACCAACTCAAAGAAGAGGAAAGTCAGGCTTGTGCCTCAAGTGCCAGTGAT Gene GeneID:617660|TMEM90A:NM_001083779:220_cdna Constitutive 0 NULL GeneID:617660 10 GENE TMEM90A MGC151580 transmembrane protein 90A EMBV3_38232 CAATAACCCAGGCTAGAACTAACTCCTCCACAGTGACCCATCTGCTATCCATGTTGGGAG Gene BVV0101_031432 + 0 NULL GK000028.2:26537473-26542607 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160422 TCONS_00160423 TCONS_00160426 TCONS_00160424 TCONS_00160425 1 XLOC_097652 Coding TCONS_00160424 XLOC_097652 Coding Coding SAR1A 28:26539609-26553956 j TSS119974 3672 1 TCONS_00160424_2 154 6 0.744458385612714 0.0139504407651786 0.0107862253612334 0.00625156117053092 0.00606606129153186 0.00447553266675642 0.000401576187747978 0.00172949673415429 0.00740589999095676 0.00571732285190979 0.00136492973252933 2.55568762033046e-17 7.39860871660473e-05 0.000899514596552658 0.00344025991881867 0.00282285134204612 0.00453959153949161 2.14679726738354e-15 0.01155811870732 0.0116894891617276 0.00784304885290827 0.00524398771873159 0.00371912450339657 0.00216312953619607 0.00230579918553364 0.0124092543787541 0.0121320141902081 0.00889402245052765 0.000628775769019113 0.00120959670708634 0.00333671895935127 XM_005226384.1 SAR1A PREDICTED: Bos taurus SAR1 homolog A (S. cerevisiae) (SAR1A), 0.0 4338 99.96 0.655501089324619 XM_005269984.1 SAR1A PREDICTED: Homo sapiens SAR1 homolog A (S. cerevisiae) (SAR1A), 0.0 1355 78.59 0.420479302832244 TCONS_00160424_2 sp|Q3T0D7|SAR1A_BOVIN SAR1A_BOVIN GTP-binding protein SAR1a; 5e-105 303 77.78 0.993506493506494 3 coding 1 1 1 1 -0.0923018251395187 0.592724484685518 -0.0431477771811041 0.55825549979534 GTGGGGACGAGCACGCGCCCGGAAGTTCCGGGGAGGGGGGTGTTACGTATATCCGGCGAGTAGCTGGCGGTCCCGGGTGCTGCTGGGCTCTGTACTCTGAGGGAGGGTCCAAGCCGCTTGCTGCCGCCGGAGGAACCCCTTGGGCCGGAGTAAGCATTAATAATGTCTTTCATCTTTGAGTGGATCTACAATGGCTTCAGCAGTGTGCTCCAGTTCCTAGGACTCTACAAGAAATCTGGAAAACTTGTATTCTTGGGTTTGGACAATGCAGGCAAAACCACTCTTCTACACATGCTCAAAGATGACAGACTGGGGCAGCATGTTCCAACGTTACATCCAACATCAGAAGAGCTGACAATTGCTGGAATGACTTTTACAACTTTTGATCTTGGTGGGCATGAGCAAGCACGTCGGGTTTGGAAAAATTACCTCCCAGCAATTAATGGGATTGTCTTTCTGGTGGACTGTGCAGATCATCCTCGACTTATGGAATCCAAAGTTGAGCTTAACGGGAATGTGACCCTGAAGGAGCTGAATGCCCGCCCCATGGAAGTGTTCATGTGCAGCGTGCTCAAGAGGCAAGGATACGGCGAGGGCTTCCGCTGGCTCTCCCAGTATATTGACTGATGTTTGGACAGTGGAAATAAAAGAGTTTTACTTCTCTGGACTGATCCTATTCACAGCTTCCTCACGAACTTTTCTAATAGAACAAGGAAAGCTCTCCGACCGTGTCCGGCGTTGAGAAGCCAAGAGTCTCTGTCTGCTCTCTCATTGCCCAGTGGTGACATGTGCTCTTCTCCACACTGTTGGGAGCTAATGCTGCCCCACGTGCTGGTGCAGGTCAGCACCCCGGGACTTGGAGGTGGCAGGATTTGTCGAGTAGAGCTGTGTGCCATCATGGGCCACCTGGAAAGAAAAACACGTCTCACCACTGTGGTTGATTTCAAAAGAAAGTGATTCTATTTTTTAAAGAAAGTGTTGTTAATGTAATCGGTGACCCTCCTCATAATTTTTTTTTTTTAAGTTCACAATATACTTGGTCCAGAGTTTTCTTTTCTTTTTTTTTAATCTAGTGAATGGCATTTAAATATTTCATAAAATTATGCACAGATACACGTTGGAGTCCAGAGCTCAGTTAAGTGAACAGCAGGCTGGTGAGAGAGGCTCCCCCGTGTCCCTGACTGCCTTTAGTAGGTGGCACCACCCTGTGCACAGAGCACTAGGGAAGAGCAGAACTCCAGCCTCGCCGCTGAGGCTGGTTTCCACCGTGCCGGGCTCCGGTCATGTCTCCTCCCAACATGGATAGCAGATGGGTCACTGTGGAGGAGTTAGTTCTAGCCTGGGTTATTGTTACTGTCTTTACTCAATAAGTTACCAATTTCAGCCCGTCTTTGCTTTTATGCAGTTTTAAACTTTGATTTCTTTCTGTAGCACCTTCTTCATTTTCAGTTGTAAAAAGTGACTTTCGCCTCATGAAAGATTTGAGTACATCTCCCATGTTGTCACACACTACAGGTGTGTCCCAGTCATTTTTGCAAATTCTAGGGGAAATTTTTTTCTCAATAGGAGAGTCACACAGGACAAAGTTAACAGCTTAAGAACTCTTAATTCTGTGAGTTGAGAACTTCGACATCTGATATTATAGCATTTGTTTGAATCTAGGAAAGATTTATTTCACTTGCAGAATTTGGTTTCTTTATTGGACTTCATGAACTCTCTTTTTTTGTATTGGTTATCAATTTTTTTTTTGGTGTTAAAGGTTATCATCTGTAACTTTTCCAGATTTTGGGGGTGGGTGGGAGGTGTTATGAAATTGTCTTTCTCCAGGCCAGAAATAACCTGGGGAAATTCTAATCCAAGAACTGTGTGTTGAGCTGTTCCTTTTGAGCCAGCATCACCTGTCAGTTAGCACCTGGTATAAAAGCCTCAGTGTCCCCAGCAGTGTGATGAGGGTTATTTTTATAGCATTCCACTTTCCTAATGTCAGGTGTGAAATCAGATTTTCATGATCTTAACCAATGTTTTACCCTTGTAGTCAAGGATGAAGGGATAAGAGATGGTCTTCATGTGGAAGGATATCTTCTTTAATTAAAAATTAGAGGTATTTTTCTCAGAACTGAAAATTGTGATGTTGAGGCTTATTTGCAGAGGACTGAACTAAATTCAGTGGATTCTTGCTTTTAATGTGAGAGCATGGAAAGTGTGGATTACACATTCCTGGGGTGAGAGTATTTTTCTTTAGTTGGATTTTGCATTGTTAGTTTTCAGTACTGACCTGTTGGGAAAGCATACTTTTTCACAGCTAGGTACCAAATGCAGAGGCTCAACGAAGCATAAAGCTGGGAAGAGCAAGTTTTTCATTTATTAGCAAGCATAGCTGGTTTGGAAAGGGATTAAAGCCTTAAGTGAACAAATCTAGCTAATGGTGAATGAACTAGGTAGTTAACTTGCATACTTTTGATTTCCTTTGGCTAAAGGTAACCCATACTTCTCTGTCCAGAGATAGGAGAGGTGTGATTGCTTCAGTGTTAGTTTTCTTTTTTTTTCTTCCTATTTGTCCCTAGTCAATTTTTAGCAAGCTAGAAAACTATGGATTCTACACAGGGCAGCTCTTTGTGAAAGTGGTTTATTTTGGCCACCGGAGAAAGAGTTGGGATTGAAAAATCAAGTGGCGCCTGTCTGTTTTTTGCCCCACAGAAAACACAGTTCCTATAATAAAATAGAGGAAAGAAGCCGCTGTGAGGAGCTCGGCTCCTAACAGGATCAGAGCTTTGTACAGGAACTCCCATGAATTGCGACTTTTCATTCTGTTTTATCAGAGTGCGTATATGTCCTATTTCAGGAAAAATAAAACAGTCATTTACAGAAGAGAGTCAATCTGTATCTTAAGTGTTTTAATAAAAAGTTAAAACAAATTTTCTATCTTGCTCCTTTTTGGCATTGGCTTGTTCTGAGTATGAACATACAACAGGTAAGAGAGACAAATTTTGCTTATGAGGGGATGCAGGGTGTGAGTGTGTGGAAAGACCAGGCCAATTTACACATTCCACTACAAGTAATAAATTGAGTACTGTTTGTGAGCCTTGCAACAAATGGTGGTCCCAGGATTGGTGGTTATTTCTGCAACTGGATGGACATGGCAGACTTTTTGTACAAAATCTCATATATTAACACACTAGTAGGGGCTGGGTTCAATTTAGCCGTGTTTTATCATTTGATATAAAATTGGAGAGATTCAGTTAAATGTTACATTTTGCAAAATAGGAAAAGTAATGAAACGTATGCTTGAGCATTTAGTATGCTTGTAGGAAGCTTTGCTTTTAAAAAACCCAAATAAGGTTCTAAAATTTAAGTACTGGGATAAAATAGAATGGGAAGCAAAATGCAGCAGGTCGTTTTAAATTACCGGAGTATTAAATTACCGGAGACATCTTGAGCTTGAAACATACTGTGAAATGATGGCATGGGTTTTACGTTTATATAAATTTATTTGTGCTACTTGAGTCAGATCAGAGCATAAAAATTAAAGGCTAAGTCAATGAGCCCAGCACTCAGGGGGTCAGGACTGTGCTGTGATGTGTCGTAAATAGAGAAAAACCTGATGCAAACAGTTCATGCTGGAGGCTTGAGCATCACTCTGGAAAGAAACACTTTCTTAATTGCTGGGAAGTT EMBV3_15343 CATGCCCACCATGCGAGCAGAAGTGTCCACCCAAGTGGAAGTAACAGCACCAGATTTCAT Gene GeneID:100301420|LOC100301420:XM_002683613:2_cdna Constitutive 0 NULL GeneID:100301420 3 GENE LOC100301420 NULL hypothetical protein LOC100301420 EMBV3_04291 TTCGCAGATCTAGCTTCTCAGAGGGGCAAACGCTCACTGTCACCGGAGGAACAAAGAAGA Gene GeneID:508354|LOC508354:NM_001101897:44_cdna Constitutive 0 NULL GeneID:508354 1 GENE LOC508354 MGC179372 hypothetical protein LOC508354 EMBV3_27401 CCTCTTGTGATTCAAATCATACCTGCATCTCCTTCCCCTACGTGAGCTCTGACCTCTGAT Gene BVT0102_082193 - 1 EMBV3_31830 GK000028.2:25221187-25228152 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08924 CCGTGAGACCTGCCAGCCCTTCAACACCACTGCAGGATAACAGAACTCAAGGCTTAACTA Gene GeneID:504954|FILIP1L:XM_002684706:30_cdna Constitutive 0 NULL GeneID:504954 1 GENE FILIP1L NULL filamin A interacting protein 1-like EMBV3_16754 CGAAAGGGATTTCTTCTGTTTGCTGAGATTGATTTCTTCCGAACCCTTGTAGCGGCCATT Variant GeneID:399683|PLP2:NM_203363:36_cdna 181^333 1 EMBV3_36772 GeneID:399683 X GENE PLP2 NULL proteolipid protein 2 (colonic epithelium-enriched) EMBV3_00724 TCCACACTTTTATCAACAAGGAACGCACCTGTCCCTAAGAGCCAAGAGGGCCAAGGTCCA Gene GeneID:513148|DHX35:XM_002692461:506_cdna Constitutive 0 NULL GeneID:513148 13 GENE DHX35 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 35 EMBV3_08015 TGAATTGGAGCCTGAGTTCATAGCCCCTGGCAACCAGACAGGAAAATTCACCTCAGACCT Gene GeneID:515853|LOC515853:XM_002686160:302_cdna Constitutive 1 NULL GeneID:515853 3 GENE LOC515853 NULL similar to UPF0486 protein C1orf59 homolog EMBV3_12485 ACCCCATCATTTTGTGGTGGATGGGGAGCTGAGTAGACATTACTCCAGTGAGGCAAAGTC Gene GeneID:516781|NAB1:NM_001102039:27_cdna UTR3_Alt 2 NULL GeneID:516781 2 GENE NAB1 MGC166379 NGFI-A binding protein 1 (EGR1 binding protein 1) EMBV3_15009 GCAGATTGTGGGGGCAGTAGGGTCATCAACACAGAGCAGGAGAACTCCAAAAAACGACCA Gene BVT0102_002151 + 1 EMBV3_30563 GK000023.2:10240613-10282755 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24719 TGACAGAACTCCGCACGGAAGGCTGGCTATGTGAAGCAGTGCCAGTCGCTGTTGGGTCAT Gene GeneID:527740|CBFA2T2:XM_002692301:1690_cdna Constitutive 0 NULL GeneID:527740 13 GENE CBFA2T2 NULL core-binding factor, runt domain, alpha subunit 2; translocated to, 2 EMBV3_05310 GATGGACAAACCTAGGCCGTAGGAGTGGACACAGGGAAGGACGGTGTCAGATGTGCTTAT Gene BVT0102_132711 + 0 NULL GK000005.2:113625792-113634003 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196587 TCONS_00196585 TCONS_00196582 TCONS_00196583 TCONS_00196588 TCONS_00196586 TCONS_00196584 1 XLOC_118382 Coding TCONS_00196588 XLOC_118382 Coding Coding TCF20 5:113632656-113732697 j TSS146253 7493 1 TCONS_00196588_6 1946 5 0.92514994002399 0.000226435757643488 0.00274363518754885 0.00180339348083746 0.00101271827564346 0.00153658581878204 0.00261371713945081 0.00223151696326584 0.00207265641500115 0.00193437621656444 0.000765957660300533 0.000225109918715454 6.75465504544718e-05 2.73135503031611e-12 0.0016504752282098 0.000455707684527165 0.00211489301513712 0.00159155276013932 0.00639326316216276 0.00190903866011353 0.00278997387517059 0.000280522316099748 0.00134581825850654 2.61324998220672e-05 9.44491028389517e-07 0.00554704056143567 0.0043946860131184 0.00202248492573003 6.87134462920732e-08 0.000177577621298384 0.00110042002402285 XM_005207398.1 TCF20 PREDICTED: Bos taurus transcription factor 20 (AR1) (TCF20), 0.0 1.291e+04 100.00 0.955291605498465 XM_005261724.1 TCF20 PREDICTED: Homo sapiens transcription factor 20 (AR1) (TCF20), 0.0 8524 86.18 0.955158147604431 TCONS_00196588_6 sp|Q9UGU0|TCF20_HUMAN TCF20_HUMAN Transcription factor 20; 0.0 3372 91.77 0.996916752312436 2 coding 0 0 1 1 -0.0149091358727162 0.932706029615599 0.00369240427567821 0.93852788144547 AGATTTCGTCTCTGCCTTGTGACTCAGTTTCCTTATCTTCGGAATGAGGAGGGCTGCTGGCCTGCTGCTGCGCTGCTGAGCAGTATGCAGTCCTTCCGGGAGCAAAGCAGTTACCACGGGAACCAGCAGAGCTACCCCCAGGAGGTGCACGGCTCATCCCGGATAGAGGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGTGCTGGTGGTGGCAGCAGCGGCAGCGGCGGCGGCGGCGGTGGTGGACGACGAGCAGCGGCGGCGGCGGCGGCCGCGATGGCCAGCGAGACCTCCGGCCATCAGGGCTACCAGGGCTTCAGGAAGGAGGCTGGAGACTTTTACTACATGGCAGGCAACAAGGACCCCGTGGCCACAGGAACCCCGCAGCCTCCTCCGCGAAGGCCTTCCGGGCCGGTGCAGAGCTACGGACCCCCCCAGGGGAGCAGCTTTGGCAATCAGTATGGCAGTGAGGGTCACGTGGGCCAGTTTCAAGCACAGCACTCTGCCCTTGGCGGTGTGTCTCATTACTCGCAGGATTACACGGGGCCGTTCTCTCCGGGGAGCGCTCAGTACCAGCAGCAGCCTTCCAGCCAGCAGCAGCAGCAGCAGCAGCAAGTGCAGCAGCTGCGGCAGCAGCTCTACCAGTCCCATCAGCCCCTGCCGCAGGCTGCCAGCCAGCCGGCGTCTGGCGCCTCGCACCTGCAGCCCATGCAGCGGCCCTCAACTCTGCCGGCCTCGGCCGCCGGCTACCAGCTGAGAGTGGGGCAGTTCGGCCAGCACTACCAGTCTTCTGCCACCGCCGCCTCCTCCTCCTTCCCATCACCGCAGCGTTTCAGCCAGTCTGGGCAGAGCTATGACGGCAGTTATAGTGTGAACGCCGGATCACAGTACGAAGGGCATAACGTGGGCTCCAACGCACAGGCTTATGGAACACAATCCAATTACAGCTATCAGCCTCAATCTATGAAGAATTTCGAACAGGCCAAGATTCCACCAGGGACCCAGCAGGGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCACCCCCCTCAGCACGTGATGCAGTATTCCAACGCTGCCACCAAGCTGCCCCTGCAAAGCCAGGTCGGGCAGTACAGCCAGCCCGAGGTTCCCGTGAGGTCCCCCATGCAGTTTCACCAGAACTTCAGCCCCATCTCTAACCCTTCCCCAGCTGCCTCCGTGGTTCAGTCTCCAAGCTGTAGCTCTACCCCGTCTCCTCTCACACAGAGCGGGGAGAACCTCCAGTGTGGGCAAGGCAATGTGCCAATGGGCTCCAGAAACAGAATCCTGCAGTTAATGCCTCAGCTCAGCCCAACCCCGTCGATGATGCCCAGTCCCAACTCTCACACTGCGGGCTTCAAAGGGTTCGGGCTGGAAGGGGTGCCTGAAAAGCGGCTGACCGATCCCGGCTTGAGTAGTTTGAGTGCCCTGAGTACGCAGGTGGCCAACCTTCCTAATACGGTTCAGCACATGCTACTTTCCGACGCCCTGACCCCTCAGAAGAAGACCTCCAAGAGGCCTTCCTCGTCATCCAAGAAAACAGACAGCTGCCCAAACTCGGAAGGCTCTTCACAGGCTGAAGAACAACTGAAGTCCCCGATGGCAGAGTCGCTAGATGGAGGCTGCTCCAGCAGTTCTGAGGATCAAGGCGAGAGGGTGAGGCAGCTGAGTGGCCAGAGCACAAGCTCGGACACCACCTACAAGGGCGGGGCCTCGGAAAAGGCAGGCTCCTCACCAGCACAGGGTGCTCAGAACGAAGCCCCCCGACTCAGCACCAGTCCTGCAGTCCGAGAAGAGACCGCCTCGCCGGGTGCCAAGGACACACCACTGTCATCTGAGGGCAACCCAAAAGTCAACGAGAAGACAGTCGGGGTGATTGTCTCCCGGGAAGCTATGGCAGGCCGGGTGGAAAAGCCTGGTGGGCAGGACAAAGGCTCCCAGGAAGAGGATCCTGCAGCCACACAGAGGCCACCCAGCACCGGGGGGGCAAAGGAAGCCAGCCACGCGTCACTTCCACAGCCAGAGCCTCCGGGAGGAGGCAGTAAAGGAAACAAGAGTGGAGACGGTAACTCCAACCACAATGGGGAAGGGAATGGCCAGACTGGGCACCCTGCAGGGGGCTCTGGTTTCACAGGCAGGACTGAGCCCAGCAAATCTCCTGGAAGCCTGCGCTATAGTTACAAAGACAGTTTTGGGTCAGCTGTGCCGAGAAACATTAGCAGCTTTGCTCAGTATCCTACAGGACAAGATAAAGGGGACTTCACCAGCCACGGGGAGCGAAAGGGTAGAAATGAGAAGTTCCCCAGCCTCCTGCAGGAGGTGCTTCAGGGTTACCACCACCACCCCGACAGGAGGTACTCCCGGAGTTCTCAGGAGCACCAGGCCATGGCTGGCAGCCTCGAAGGAGCCACAAGGCCTAATGTCTTAGTGAGTCAGACCAATGAGTTAGCTAGCAGGGGCCTTCTGAACAAAAGCATTGGGTCCCTGTTAGAAAACCCCCACTGGGGCCCCTGGGAAAGAAAGTCAAGTGGCACAGCTCCTGAGATGAAACAGATCAATTTGGCCGACTACCCAATTCCCAGAAAGTTTGAAATAGAGCCTCCATCGTCAGCCCATGAGCCCGGGGGTTCCCTCTCTGAGAGAAGATCAGTCATCTGTGACATTTCTCCACTAAGACAGATTGTCAGAGACCCGGGGGCTCACTCGCTAGGACACATGGGCGCCGACACCAGACTTGGGAGGAATGAGCGTCTCAATCCCAGTTTAAGTCAGTCAGTCATTCTTCCAGGTGGGCTGGTGTCCATGGAAACAAAGCTGAAATCCCAGAGTGGGCAGATAAAAGAGGAAGACTTTGAACAGTCCAAGTCCCAAGCTAGTTTCAACAACAAGAAATCGGGAGACCACTGCCACCCTGCTAGCATCAAGCACGAGTCTTACCGAGGCAATGCCAGCCCCGGAGCGGCGACCCATGATTCCATCTCAGACTACGGCCCGCAGGACAGCAGACCCACACCAATGCGGCGAGTCCCCGGCAGAGTTGGCAGTCGGGAGGGCATGAGGGGTCGGTCCCCTTCTCAGTATCATGACTTTTCAGAAAAGTTGAAGATGTCCCCTGGGAGGAGCAGAGGCCCAGGGGGCGACCCTCATCACATGAGCCCACACATGACCTTCTCCGAGAGGGCCAACAGGAGTTCTTTGCATGCTCCCTTTTCTCCCAATTCGGAAAGCCTGGCCTCTGCTTATCACACAAACACGCGTGCTCATGCTTATGGGGACCCCAGTGCAGGTTTGAATTCCCAGCTCCATTACAAGAGACAGATGTACCAACAGCAGCAAGAGGAATATAAGGACTGGGGTGGCAGTTCTGCTCAGGGAGTGATCGCTGCGGCTCAGCATAGGCAGGAGGGACCCCGCAAGAGTCCACGTCAGCAGCAGTTTCTCGACCGAGTCCGGAGCCCCCTGAAGAATGACAAAGATGGCATGATGTATGGCCCACCGATGGGGACGTACCATGACCCCAGCGGTCAGGACGGTGGGCGCTGCCTCATGTCTAGTGATGGTCTTTCTAACAAAGGCATTGAACTGAAGCACGGCTCCCAGAAGTTACAGCAAGAATCTTGTTGGGATCTCTCTCGGCAGACTTCTCCAGCCAAAAGCAGCGGCCCCCCAGGAATGTCCAATCAGAAAAGGTACGGACCACCCCATGAGACCGATGGACACGGGCTCGCAGAGTCTACGCAGTCATCCAAACCGAGTAACGTTATGCTGAGACTTCCAGGTCAAGAGGATCATTCTTCTCAAAACCCCTTAATCATGAGGAGGCGTGTCCGTTCTTTTATCTCTCCCATTCCCAGTAAGAGACAGTCACAGGATGTGAAGAACAGTAACACTGAAGATAAAGGGCGCCTCCTTCACCCGTCAAAAGAAGGCACTGACAAAGCGTACAATTCCTATGCCCATCTTTCTCACAGTCAGGAGATCAAGTCCATCCCTAAGAGGGAGTCCTCCAAGGACCTTCCAAGTCCAGATAGTAGGAACTGCCCTGCGGTCACCCTTACAAGTCCTGCTAAGACCAAAATCCTGCCCCCAAGGAAAGGCCGGGGGTTGAAACTGGAAGCTATCGTCCAGAAGATCACATCCCCAAACATTAGGAGGAGCGCGTCCTCGAACAGCGCAGAGGCTGGGGGAGACACAGTTACTCTTGACGACATCCTGTCTTTGAAAAGCGGCCCTCCGGAAGGTGGGAGCGGTGCCGTTCCAGACACTGAGCTGGAGAAGAGAAAAGGCGAGGTGATAGCTGAGCTGGCCTGTCCCGCAGGCCAGGAGCTGAGCGGAGAAAAGCCTCTGGCCCGGTCTTCGGAGGAGTGGCGCGGTGGTGGGGACGACAAGGTGAAGACGGAGACGCACCCTGACACGGTCGCCGCTGGGAAGGAGCCCCCTGGTGCCATGGCATCCACAACCTCACAGAAGCCTGGGAGTAACCAAGGGAGACCAGACGGGTCCCTGGGCGGGACAGCACCTTTAATCTTTCCTGACTCAAAGAATGTACCTCCAGTGGGCACGTTGGCTCCCGAGGCAAACCCCAAGGCTGAAGAGAAAGAGAGCGATGCCGTGACGATTTCCCCCAAACAGGAGGGCTTCCCCCCGAAGGGTTACTTCCCCTCAGGAAAGAAGAAAGGGAGACCCATTGGTAGTGTAAATAAGCAGAAGAAACAACAGCAGCCCCCGCCGCCACCCCCTCAACCCCCTCAGATACCAGAGGGTTCTGCTGATGGAGAGCCAAAGCCAAAAAAGCAGAGGCAGCGGAGGGAGCGAAGGAAGCCTGGGGCGCAGCCCAGGAAGCGGAAAACCAAACAGGCCATTCCCATCGTAGAACCCCAAGAACCGGAGATCAAGCTGAAGTACGCCACCCAGCCCCTGGATAAAACCGATGCCAAGAACAAGTCTTTTTTCCCTTATATCCACGTAGTAAATAAGTGTGAACTTGGAGCCGTGTGTACAATCATCAACGCCGAGGAGGAGGAGCAGACCAAATTGGTGAGGGGGCGGAAGGGCCAGCGGTCCCTGACGCCTCCGCCCAGCAGCACCGAGAGCAAGGTTCTCCCAGCCTCGTCCTTCGTGCTGCAGGGCCCCGTGGTGACAGAGTCTTCTGTGATGGGGCACCTGGTTTGCTGTCTGTGCGGCAAGTGGGCCAGTTACCGGAACATGGGCGACCTCTTTGGACCCTTTTACCCCCAAGATTATGCAGCCACTCTCCCCAAGAATCCACCTCCCAAGAGGGCCGCGGAAACGCAGAGCAAGGTGAAGGTCCGGCACAAAAGCGCTTCGAACGGCTCCAAGACGGACACTGAGGAGGAGGAAGAGCAGCAGCAGCAGAAGGAGCAGAGGAGCCTGGCCGCGCACCCCAGGTTTAAGCGGCGACACCGCTCGGAAGACTGTGCCGGAGGCCCCCGGTCCCTGTCCAGGGGGCTCCCTTGTAAAAAAGCCACCACCGAGGGCAGCAGCGAAAAGACTGTTTTGGACTCAAAGCCCTCCGTGCCCACCACTTCAGAAGGTGGCCCCGAGTTGGAGTTACAAATCCCTGAACTACCTCTCGACAGCAATGAATTTTGGGTCCACGAGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGGTCTGTGGCCGGCTCTATGGCCTGCAGGAAGCGCTGGAAATAGCCAGAGAGATGAAATGTTCCCACTGCCAGGAGGCAGGCGCCACCTTGGGCTGCTACAACAAAGGCTGCTCCTTCCGATACCATTACCCGTGTGCCATTGATGCAGATTGTTTGCTCCACGAGGAGAACTTCTCGGTGAGGTGCCCCAAGCACAAGGTGAGACTGTGGAGATGAGAAGGTGGTGGATACTCGTGATGGAATGGAAACGGTCCTCCTGTGCAGCCACACCCCACCCCGCCCCACCCCGCGTGCCTGCCCGCGCCAGCACTTCCTTCCTAAGTTCTTACATCACTCTCAAACCGGTGACACCACAGGAAAGAAAGACCCAAGACGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGACCGTGTGGGGGGAGGGGGGAGGGGTGGGATGATGGGAAAGGGTGGGGGGAATTAAAAGGGAGGGATAAAAATATATATATATAAATCTATTTTTAGTCTGGAAAGACTTTGTTTAAATGAAAGGTGCGCTATCCCTTTTGATTCTATTTTAAAATTATCTAGTTAAAGAACTCCAAATTTGTTCCAATAACGTGAAATTTAAATGTGAAATTGAACTGAACAAACTCTGATCTCACAAGGACAGGGGTGGCTTAGATCCTTGGCCCAGCTCACACAATTCAGAGACTCTAGACCCAGGGTCAGAGGAACAGACGAACCACACCAAACCATGTCTTTGTCAGTAATTTGTCTCAAAAGTGGGAAGGTCAAGGGGGAGGGAAGTGGGGGATGGTCCGTGTTTTCAAGAATGGGAGAATGATGTTTAAACACAAAAATAAATCTTTTTCATTTCCAGAAACACTATTTATTTATTATTTAAAAAAATTTTTTTTTTTTTCGGGGGAGGGGACATTGGCGGATGCCCCAAGGCGGAGGCCCCACGGTCACAACTGTGTCCTGGGTCCTTGGCCGGTGAGAGCCCCGAGGGTCCCACCAAAGCGGCTTGGCCGGCAGGATCAAGGGGTGGCTGCCCCTGGGCACATTCCAGGCAGCTGTTGTGCCCTGACCCCCAGGGCGGATGGACAAACCTAGGCCGTAGGAGTGGACACAGGGAAGGACGGTGTCAGATGTGCTCATGTGTGGGGGGGGGGTAAGCTGACCAGGAGCACCCACTCCACCCTTTCTTCTTTGCTTTCACTTTTATAAAGGATAAGGGAGCCTGCCAGTTGAGCAGCCCCCCGCTACATGATTCTCTATGTTGTGTTGTTTTGTTTTGTTTTGTAAATTGTATAATTTTTAAATATCTGAGTTTTAAAAAAAGAAAAAAGTACAAAAAAAAAATCTTGTTAAGGCCTTAAGAAGGGGTTAGTGCATCTTTCAGGGGTCACTCTGCCGTGGGGATAAAATAGCTGTTTCACAAACAGTTTTATTTAAAAAACAAAACAAAAAAAATCAAAAAAATAATAAACTTCATTTTAACCTTGTTTCCTTTTTTGTTTGAAGCAAACGTGTCTCTTTCTCCTCCCATTCCAGCCGTCAGGCTGGCTCTGATTCTGCTGCGGAGGTGGCTGCCATCAGACTGGCCCAGCCACCTAGGCCTCCCGCAGGCCCAGGGCCCTTGCAGCAGACCCTGGAATGATCCCAACCAAGGACAGTTCTAGCCGCTCAGCCTGGTGGGTCGAACTCAGCCGTGTGTGAAGATGGCCAGATTACTTGAGAGGAGGACAAAATTCCAATCAATGTGAATTTTAAAGCTTATTAAAAAATAATGC EMBV3_11889 GGTCAGAGCCTGTCCAGAACTCGCACATGTTTCAGGGTGTTTATGGCCTCATGCTTTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21365 CGTCGGGAGGACAGGTGTGTAGTAACTGTTCCAGAAGCTGAACGGATTGTTAGAGCCAAA Gene BVT0102_320130 - 0 NULL GK000016.2:70501668-70619177 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073980 1 XLOC_045740 NonCoding TCONS_00073980 XLOC_045740 NonCoding NonCoding - 16:70549165-70549934 - TSS55824 769 1 TCONS_00073980_1 75 1 0 1.76927146041332e-05 0.000287471964362541 0 0.000423306971533727 6.42026418463799e-06 3.25609417254756e-05 0 0 0 0 0 0 0 0 0 0 0 0.00371958620518683 0 0 0 0 0 2.18005587385677e-05 0 6.41329625908657e-05 0.000152383680483693 0 0 0 0 noncoding 0 0 0 0 0.00277609126194461 0.980773980552546 0.0072160900178959 0.890264469731237 ATGGCTATTTATATGTTCCAGGAGTTATATGTGGCCATGAATGTGCTCTTTGTGTGCCACTTTTTCCGCAGCAGCCTGAATGCACATGTGTGCCAACATACACATAAGGCTTTGTCTTTGACCTTTTTTTTTTTTTTTGGTCTGTTGGCTCAAAGCAAACATGTTGGCTGGCAGCTGCTAGCCCCTCATGTAGAAGGAGGGTGTGAGCTGGACCAGGCAGTAGGTTAGTTTAGGGAGGGAAAGCCATGTAGACAAGGGCAGAAAAAGGGATCCTTTCCCCCATATACTGCTTCCTATAATGAGAGTCTAGTGCTAATACAAGGATCCTTGCATTTCTAATGTTGAAATCCAGTGAATTAAATGATGTTAGAATAAATCCGCCTGCCTTTAGCAAGAATGCAAAAGGTAGCCGATCGGCACAAATGAGTCTCTGCAGCCTTGCTCTCCTTCTTTGAAGCTCAGGTCTAAGGAGTCAATTGCAACACGCCTCTCAGGTCCTGCCAGCTTCAGGTCGCTTGAACTTTAATGTTGCCTTTCATCCGAGAAGCCTGAAGTATTTGGCAAACATTAACTCACTGATCTTCATGTCAGCCTCCCAGCAGGAGGGGATGTTAGAAGAAAGGAACAACTCCTAAAACGTCAGGAGGACAGGTGTGTAGTAACTGTTCCAGAAGCTGAACGGATTGTTAGAGCCAAAAATTGATTGAGGATCCTACATGATACAGGATTGCAAACAGGTCCCAGGTGAAAGAAGACCCTTTTGAAGAGT TCONS_00068150 . 3' 1149 TCONS_00068150 . 3' 1917 EMBV3_17470 TCCTTTCCCTTGGTGGCCCTTTTCCCCACCCCTACCCTGATTTTATGACTTCCATTTGGC Gene GeneID:100139730|COL15A1:XM_002689737:5_cdna Constitutive 0 NULL GeneID:100139730 8 GENE COL15A1 NULL collagen, type XV, alpha 1 EMBV3_26749 TCACCAAATTGTCACCTGCGCCCTTCAGTGGCGACTCTGGTCTAAGGGAATGTTCAGCAA Gene GeneID:787248|SIPA1L1:XM_002690995:292_cdna UTR3_Alt 2 NULL GeneID:787248 10 GENE SIPA1L1 NULL signal-induced proliferation-associated 1 like 1 EMBV3_39958 CCATCGGGGAGAAGCAAACCTCAATGACACTGCAAGGATCTACTACCTCCGCAGCTACAT Gene GeneID:514332|LCT:XM_002683607:7_cdna Constitutive 0 NULL GeneID:514332 2 GENE LCT NULL lactase EMBV3_14676 CCATCTGAGACACCAGAGAAGCCCTCCCAGTATAGGAAAGTTGTTCTCAAACTCAAGGCC Gene BVV0101_034536 + 0 NULL GK000011.2:6757781-6848035 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023909 TCONS_00023922 TCONS_00023921 1 XLOC_014385 Coding TCONS_00023922 XLOC_014385 NonCoding Coding - 11:6775508-6800966 - TSS17675 1576 4 TCONS_00023922_4 49 0.315989847715736 2 0.938170247868956 0.000483450030497289 0.000236452312490699 1.82744509942116e-20 5.79604533218613e-05 0.000202583777260967 1.58879539213559e-05 5.02935588467776e-05 9.00718304067337e-05 6.04290972607827e-05 0 0 0 9.10294831620237e-06 0 0 3.351718274063e-05 0 0 2.39025840963434e-06 0.00238877922911628 1.15654615780587e-36 0 0 0 3.54288211914815e-22 7.16569524706606e-17 1.32288339495812e-09 0 0 0 XM_005196788.1 PIAS2 PREDICTED: Bos taurus protein inhibitor of activated STAT, 2 (PIAS2), transcript variant X9, mRNA. 7e-50 203 85.08 0.114213197969543 0 noncoding CTTCCTCTGCCTGGACCCTGTCTGCCCAGTCAGTGTAGAAAATGGTGTGGCTGCATTAGGGGACCCACTCAGCTACATACAGATAGAAGAAACATCACCCTCTATGATGTAGGAAAGCTGAGCAAAGCCGAGAGGATCTCCTGGGGGCCCGTCTGTGCAAAAAAAAAAAGAAAACAAACCTGTGATGCTTGAGATGCTGCAAGACTTGGCATTTGAAGTAGTTCTCCTGGAAGATTTATTACTGGATAAGTCACAAATTTTGAATGAGAAATGGAATCAAGTCGAGGGTTGAGCAAGCAGACAACAAGCACAAACCAGAGAAAACAGTGCTTTCTTCTCCAACTCGTAGGTTTGTTCTAAGGGACGAGTTAAGAGGTTTATAACCATTTTTTAAGACTGAAGTATAGTTAATTTACCATGTGTGAGTTTCTGCTCTACAGCACAGTGATTCATTTGTACATGTTGTTGTTCAGTCACTAAGTCCTGTCTGACTCTTTGCAACCCCATGGACTGCAGCACACCAGGCTTCCCTGGCCCTCACCGTCTCCAGGTGTCTGCCCAAGTTCATGTCCACTGAATAGATGATGCCACATTAGAAGAAAAAAGAAAAAGATCCTGCAGGATGCAATGAAGTTCCGCTGTGCTGCAACTAAGACCCAACACAGCCACATAAACAACAACAAAAACAAACCCCCAAAAAGCCCTTATAAAAAAAATCCAGATTCGCAGGCACTCCCTGTAGAGTCTGCTCAGGAGACAGGACTATAGAAGGTCCAGGAGACTCTGGCGCACAGCCAGGCACGGGGCCCTCTGGGTCTACCCTGGGTTTGAAGGCACTGCGCTTCAGTAAATAGCGACAACAGTGTTAGTCCTCTTCTCAGCCCACTTGTGAGCCCCAGAGGCAAAGCCAGGGTTGGGAGAGCTGGTCTGAGCTCCTGCACACATCCTTCCTCTGGGCCTTTGCCTGCAGCAGCCCTGGAAATGGCTGACTGCTGATTCAAACATCAGGTTTCTCTCCTCTTCTCACTTCCCCATGGGGTCAAGGTTGAGAAACACTGTGCTCCATCCTGTGAGTCCCATTGGCTGAGTCAGGTCTCCATCTTCCTTCAGAATGATCCAGTATAGGACAGTGTTAGTAGCTCAGTCATGTCTGACTCTTTGCAACCCCAAGAACTCTAGTATCCATGGAATTCTCCAGGCAAGAATACTGAAGTGGGTTGCCATTTCCTTTTCTAGGGGATCTTCCCAAGCCAGGGATTGAACCCAGTTCTCCCACATTGCAGGCAGATTCTTTACCATCTGAGACTCCAGAGAAGCCCTCCCAGTATAGGAAAGTTGTTCTCAAACTCAAGGCCTGCATGTTCATGAACAGTGCATGGTGAGATGTAACAAAGACAGCTGAAGATTCCTCTCAAGGGCTGTGACAAAGAGTTGGGTAAGAAGAAGAAGTATTATTCAACAAGGACCTACTGTACAGCACAGGAAACTGCTCAGTGTTTTGTGGCAGCCTTGCTGGGAGGGGAGTGTGGGGGAGAATGGATACATGTGTATGTATGGCTGAGTCCCTTTGCTGCTG TCONS_00023920 s 5' 0 TCONS_00023920 s 5' 0 EMBV3_06876 TGATAGGCAGCCAGAGCTGGAAGGGGACAATCGCAGCCCCAGAGAGACATTATCTACAAA Gene BVT0102_080757 + 1 EMBV3_34191 GK000008.2:51722112-52196979 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00210234 TCONS_00206812 TCONS_00224113 TCONS_00007677 TCONS_00197928 TCONS_00231338 TCONS_00066283 TCONS_00229957 TCONS_00252235 TCONS_00116100 TCONS_00169197 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00220662 TCONS_00038381 TCONS_00122015 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00207069 TCONS_00252810 TCONS_00023373 TCONS_00078473 TCONS_00116172 TCONS_00175855 TCONS_00252107 TCONS_00169198 TCONS_00148280 TCONS_00175580 TCONS_00021569 TCONS_00176735 TCONS_00031939 TCONS_00239419 TCONS_00039951 TCONS_00189891 TCONS_00169199 TCONS_00155779 TCONS_00229819 TCONS_00041057 TCONS_00063181 TCONS_00185881 TCONS_00062744 TCONS_00009259 TCONS_00111497 TCONS_00109027 TCONS_00020017 TCONS_00209636 TCONS_00155780 TCONS_00019961 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00039226 TCONS_00178325 TCONS_00233372 TCONS_00040836 TCONS_00153218 TCONS_00240534 TCONS_00123168 TCONS_00065823 TCONS_00140840 TCONS_00085967 TCONS_00039904 TCONS_00207755 TCONS_00199802 TCONS_00250246 TCONS_00020756 TCONS_00238327 TCONS_00249772 TCONS_00010471 TCONS_00088088 TCONS_00021595 TCONS_00199424 TCONS_00200529 TCONS_00056820 TCONS_00071033 TCONS_00059708 TCONS_00115148 TCONS_00198813 TCONS_00170823 TCONS_00250726 TCONS_00249569 TCONS_00116665 TCONS_00250579 TCONS_00142649 TCONS_00249087 TCONS_00122313 TCONS_00070810 TCONS_00131550 TCONS_00122479 TCONS_00218552 TCONS_00122686 TCONS_00007359 TCONS_00166449 TCONS_00152645 TCONS_00251929 95 XLOC_107421 XLOC_128744 XLOC_125332 XLOC_137409 XLOC_003238 XLOC_119588 XLOC_140827 XLOC_040997 XLOC_139451 XLOC_155176 XLOC_070269 XLOC_103305 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_133979 XLOC_022206 XLOC_073571 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_125588 XLOC_155751 XLOC_014040 XLOC_047361 XLOC_070341 XLOC_105634 XLOC_155048 XLOC_090162 XLOC_105361 XLOC_012242 XLOC_106509 XLOC_018184 XLOC_146085 XLOC_023768 XLOC_115928 XLOC_094822 XLOC_139313 XLOC_024868 XLOC_037908 XLOC_111934 XLOC_037471 XLOC_004815 XLOC_067397 XLOC_064932 XLOC_010695 XLOC_128147 XLOC_010639 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_023044 XLOC_108098 XLOC_142854 XLOC_024650 XLOC_092983 XLOC_147198 XLOC_074722 XLOC_040542 XLOC_085269 XLOC_052005 XLOC_023721 XLOC_126270 XLOC_121454 XLOC_153189 XLOC_011431 XLOC_144994 XLOC_152715 XLOC_006022 XLOC_052875 XLOC_012268 XLOC_121077 XLOC_122181 XLOC_034623 XLOC_042806 XLOC_036490 XLOC_069449 XLOC_120466 XLOC_103665 XLOC_153669 XLOC_152512 XLOC_070831 XLOC_153522 XLOC_087074 XLOC_152030 XLOC_073868 XLOC_042587 XLOC_080255 XLOC_074034 XLOC_131872 XLOC_074241 XLOC_002920 XLOC_101287 XLOC_092410 XLOC_154870 Coding TCONS_00116100 XLOC_070269 NonCoding NonCoding - 20:15036325-15038215 - TSS86568 1890 1 TCONS_00116100_1 53 0.942857142857143 1 0 7.23702601438839e-05 7.81903247250879e-05 2.91580883523376e-05 2.70946455589632e-05 0.000106197122794357 4.73155178289295e-06 3.51606748361445e-05 1.99083743925294e-05 0.00016656296138986 7.27838927030585e-05 2.35454359518847e-05 2.36459519672901e-05 4.7022941607766e-05 0.000280078706620062 4.69513231971984e-05 0.00124429166142033 0.000393131041076018 0.00158052346381879 3.45945206859299e-05 1.34646954334181e-05 5.09961842555924e-05 0.000715515348527115 0.000359240541946966 0.000372632576743806 6.52504793542842e-05 1.78634451650475e-05 2.42064258047446e-05 0.000191924270836035 9.38028927268321e-05 0.000256353240131814 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 2e-75 288 98.78 0.0862433862433862 0 noncoding 1 1 1 1 -0.0633622171091176 0.579861142912628 -0.0149585236604085 0.812391044970016 CAGACGTGAAGTGAGCAAATGTGGGAATGAAAAATGATGCCAGTAGACTTGCTGGACCCAATGTGGCCAAAAGCCTTCAATTTGTAAAAACTACAGTAAAGTGAAGCACAGCAAACCGAGCTATGCCTGTACTGTTGCTTAAGCCACTTAGCTTGTGGTTTTTTGTTATGGTAGCCGAGCAAACTAATATGGGTACTCTCAGGCTCCCTCGTTGAGAACGATTTATAAAGAACAGTAAATGATTAATTTGATTTAAGCATGCATTTCATATGTGTGTTAGTCACTCAGTCGTGTCTGACTCTTTCTGTCCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCTATGGAATTCTCCAGGCAAGAATAGTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATTGAATCTGGGTCTCCTGCATTGCAGGCAGATCGTTTACTGTCTAAGCCACCAGCTTTTAAAAGTTTTATCTTTGGAGGAGGAGCCAAGATGGCGGAGGAGTAGGACGGGGAGAACACTTTCTCCCCCAGAAATTCATCAAAAGAGCATTTAAACGTCGAGTAAATTCCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAACCCAACTCTTCGAAAGGAGGTAGGAAAAAATATTAAAGACAAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCCGGGAAGGGAATCTTAAAAAGAGAGAAGTTTCCAAACACCAGGAAACCTTCTCACTGCCGAATCTGTGCCGAGCTTTGGAAGCACAGAGGGCAACATAACAGGGAGAAAAATAAATAAACAATTAAAACTCGCAGATTTCGAGCCCTACGATAACTCCCCCAGCGGAGAAGCAGCACAGACGCCTGCATCCGCCATTAGCAAGCGGGGGCTGGGCAGGGAGGCGCGGCGCGGGCTGCATCGCTGAGAGTAAGAATCTGACCTGAATACCCTGAGCGCTATCTGAGCGAAATAATTTGGGTTAGCAAACCAGACTGTGGGATATCTACCACGCGAAAAGCCAGTCCTAACCTAAAAACGTCAGGCCCGCGCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCTTCCCCCTCCGGTGACAGGCAGCCAGAGCCGGAAGGGGGCAATCGCAGCCCCAGAGAGACATTATCTATAAAACTGTAAGCGGGCTTCTTTGCTAACTAAAACTTCTTGGGGGTCTGGACGGTCAACATCTGCCTGAGAAGGTGCGCCGGTGTTACAACCAGAAAACCGAGTGGCAGGGAGGCGGTAAGTCGCAGCATTGGCGCTCGCCAAATACCTCATCACCTGAGCTGCTCGGACCTGGGAAGAGCACAAAACGCAGGCCCAACTGAGTCTGCGCCTCTGAGGACTACCCGAGTGCCTGAACCTGAGCGGCTTGGACCTGGGAGGTGCATGCAGCCCAGGGCCAGCCTCGGATTGTTCCCGGCGGAACAACCTAGAGCCCGAGCAGTGTGGACAGGGAGGCTACACGCGCCGTGAGTGGGGGCAGACCCAGGGTGGCTGAGGCACTGCGAGCCCACGCCAGTGTTATTTGTTTGCAGCATTCCTCCCTCCCTCCCCACAGCGCGACTGAACAAGTAAGCCTAAAAAAAAAAAAAAAAAAAAAAAGTGTCCTCCACCGTCCCCTTTGTGTCAGGGCGGAAACCAGATACTGAAGAGACTAGCAAACAGAAGAAGATATAACAGAGGGAAACGCCTTGGAAGCTACAGGCAATAGACCAAAACCCTGTGGTTACTACGGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGTCTGACCAAGGAACTAGCCAAAAATGAACTGAACACACAACAC TCONS_00114628 TCONS_00114629 . 3' 16523 TCONS_00114628 TCONS_00114629 . 3' 18412 EMBV3_00707 GCCCTATCATACTTCTTTCTCAATCTTGCACCAATCAGTAGTCCCGTACTGAGTTCTGAC Gene BVV0102_422893 + 0 NULL GK000017.2:49265632-49336389 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17976 CAGCCTGTAATCCTTTAGTGCTCAGTCTATGCCAACCCCTAAGGTGGGAGAAAGCCCACT Gene BVV0101_057584 + 0 NULL GK000013.2:15208539-15675639 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38137 AGGCTCTCTGCTCCTGTTCACCATTATCTGCTGAAACCTTAAGGCTGCGAGGTCACAACT Gene BVV0102_138288 + 0 NULL GK000014.2:2309100-2310808 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43474 GAAAGGGACAAAGCAGAGAGAGCCAAGAAGGTCCGGCTGCCAGATGGGACCTCACTGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27936 GAGCTCTCCACACACTCATGCGAGCCTTGGAAGCCTGTCAGCTATTCCCTTTTAGGATCT Gene BVT0102_293860 + 1 EMBV3_03977 GK000001.2:154575202-154627209 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012096 1 XLOC_007646 NonCoding TCONS_00012096 XLOC_007646 NonCoding NonCoding - 1:154612937-154613576 - TSS9173 639 1 TCONS_00012096_1 60 0.330203442879499 1 0 0 0 0 0 0 0 0 0 0 0 2.50771384467841e-05 5.59575462926522e-06 0 0 0 0 0 0 0 0 0 2.32259621606315e-05 0.000258423122182269 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.143202123713571 0.272830660977901 0.0318859608363351 0.615921556825895 CTCAATCTGATTTAAAAGTATTTTTGAAGATAGATCATTCTGCTTTGCTTCAGCACAGAAAACAAACTGCAATGGGCAAGCCTGGGGAGGGCAGACTGGGGCGAGGCTGCACTGACCCCAGCAGGAGGCAGAGCAGCATAAAGACACACCAAGCGGGCAGGGAGAGACCTGCTGCTTCCACTCTCTGGTCAGGGCTACAGAGCTCTCCACACACTCATGCGAGCCTTGGAAGCCTGTCAGCTATTCCCTTTTAGGATCTGCTTTATTGGTGAGACGTTTGTACATATATGATAATTCAAAAAACCAAAGGTCCTCCAATGTCAGCTTGATTTGGGGGCTGTCATAAAATTCAAGTTCAGTTGTATCAGCTTCTAGACAGTGAATTTCGGCTGCCTTTCCACAGAACCACTTAGTAAAAATCAAAGCTTGAGGAGCCATAAATTCTACACTACTATTATTAAATCTGATTCACAGTATTATCATCACATCTGTATTACTAGCACAATGTCAAAGACACATCCTTGTCAATCTGCACCAAAGCTTGTCACTTTCACTATTTGTGTATCACATAAAAGATGGCAGCTTCTAAAGAAAATCTAAAATTCATCATCTGTAATCATCACCTGCAAATAATTCTAT TCONS_00005755 . 5' 14352 TCONS_00005755 . 5' 14352 EMBV3_33900 TAGGAACTGGAGGGACCAGAGGAACATCATTTCACACCAAACTAGGTCCCGTAACTCCAC Gene GeneID:613439|ELF2:XM_002694343:87_cdna UTR3_Alt 2 NULL GeneID:613439 17 GENE ELF2 NULL E74-like factor 2 (ets domain transcription factor) EMBV3_38725 TGCAGGAGGTGGAGAGCAAGATCGAAGGCTTCAAGTGCTTCACCAAGAAGATGGACGACA Gene GeneID:538366|SNX18:NM_001083731:79_cdna UTR3_Alt 2 NULL GeneID:538366 20 GENE SNX18 MGC155086 SNAG1 sorting nexin 18 EMBV3_17356 TTTGGTTTCCCTGCCCTTCCTCTCCCACGGGGCCCCAAACCCAGGCTCGGGACCTGTAAA Gene BVV0102_412540 - 1 EMBV3_05885 GK000016.2:3032046-3099022 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28577 GCCTGGATTCCCATGATAGTGACCCAAACCCTTTCCTGGTTAGAGCTTCTGATTTTACAG Gene BVV0102_367069 + 0 NULL GK000023.2:32004355-32029121 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00137238 1 XLOC_083448 NonCoding TCONS_00137238 XLOC_083448 NonCoding NonCoding - 23:32019567-32020386 - TSS102528 819 2 TCONS_00137238_1 40 1 0 0 0 0 0 0 0 0 0 1.92678063462645e-05 0 0 0 0 0 0 0 0 0 1.75114255995148e-05 0.000403914913086774 0 0 0 0 8.45968834620006e-06 0 0 0 0 0 XM_005196671.1 SLC17A1 PREDICTED: Bos taurus solute carrier family 17 (organic anion transporter), member 1 (SLC17A1), transcript variant X10, mRNA. 0.0 1478 100.00 0.998778998778999 0 noncoding 0 0 0 0 0.00392684291055867 0.975190083512192 -0.0106710418073431 0.81580454641379 CAGGACCCATGTGTCTCATGGATATTGGAAGGTTGTCAGGCCCTATCTGCCCTTTCTCCTCTGAGATGCTTAACCCTTATCTGCTCTCTTGCATAGTCTCTCTCTTTTCCTGTCTCCCTACAAGCCTCTGAGCACAGCTGCCTCTGTTTTGAATGCATATGACCCTCCCACCCCCAAATGGTGGTCACAGCATCCAAGTCTGTCTGACCTTCTCTTTCAGGAAGTAGAAAACTTTGTAAAGGACAGACTGTAAATAGTTTAGACTTTGTGGATCCGTGGATCGCTGTCAACAACCACAGACAGTCAGAGTTAACATATCAACTAGTGGGTGTTGCCAGATTGGGCTAACAGGCAATAGTTTGCCAACTCCTGAACTAATTTTTTTTCATTTTCCCGAACTGTTGTTGAGAGAACCTGTTGGGTTTTCTGTGGGTCAGATGTTCACTCCTGATTCAGTAATTTAGGAAAGAAGGTCTAGAGTTGCCCTTTGGGCATTTATGGGCTGGGAAGACTGATTTTTCTAGCAGAGCAGCTCAGCTTTGTTATCTGTGAATTGGGGTAGAGAGAGTTTGCATTGTCTCACTTCAGACTTCAGTATCATTATGGACGAGGAAAATTTCCTAAATGCTGGAGTATGCTGGGTCCACACTAAGCTGTATTTTTCCTATAGGAAAAATAAGCAGTTCCCATTCTAAAATGCCTGGATTCCCATGATAGTGACCCAAACCCTTTCCTGGTTAGAGCTTCTGATTTTACAGCATAAGGAATTAGGTCTCTGTTGTAGCAGTCATGGGGTTTGGTTTTGTTTTGACTGAGTTG TCONS_00134956 . 5' 4609 TCONS_00134956 . 5' 4609 EMBV3_00003 CATTGACATCTATGCCCGTGCTGTGTTCCCCGCGGCCTTTGCCGCCGTCAACGTCATCTA Gene GeneID:508711|GABRD:NM_001081715:82_cdna Constitutive 0 NULL GeneID:508711 16 GENE GABRD MGC148650 gamma-aminobutyric acid (GABA) A receptor, delta EMBV3_22552 CTGCAGGAAAAAAAAGACAATTACACCTTGGCACGCTGCCTGGCCCTAGCCCAACTGTTT Gene BVV0102_348988 - 1 EMBV3_16824 GK000025.2:36045874-36050525 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23785 CAGGGCTGCCAACAACCAGGGCGTTAAGTTTAGTGTATTTATCCATCAGCCCAGAGCACT Gene GeneID:538970|C4H7orf25:NM_001076140:55_cdna Constitutive 0 NULL GeneID:538970 4 GENE C4H7orf25 C7orf25 MGC139430 chromosome 7 open reading frame 25 ortholog EMBV3_15635 TTCAATGTAGGCTGCAAGAAAAAAGCCTGCCATGGGCCACCTCTCATCAGGACTATGCCA Gene GeneID:407103|TRPC5:NM_001166574:123_cdna Constitutive 0 NULL GeneID:407103 X GENE TRPC5 trp transient receptor potential cation channel, subfamily C, member 5 EMBV3_03697 CTCAACGAGTTAGATCCTGTACTAAAAGACCTCCTTCCTCCAACAGATGCCCGGTTCCGG Gene GeneID:533634|OSBPL6:XM_002685263:70_cdna UTR3_Alt 2 NULL GeneID:533634 2 GENE OSBPL6 NULL oxysterol binding protein-like 6 EMBV3_09731 GGTCACCATCGTGCAGCAGGCACCTCTAGGTCAGCACCAGCTTCCAATAAAAACTGTAAC Gene GeneID:532359|FOXK2:XM_002696128:244_cdna UTR3_Alt 2 NULL GeneID:532359 19 GENE FOXK2 NULL forkhead box K2 EMBV3_21501 CTTTGAACATTACGAGAAGGGCAGCATCCCGGTCCTCACCATCCACATCTTCCTGGTGTT Gene GeneID:518283|PTAFR:NM_001040538:179_cdna Constitutive 0 NULL GeneID:518283 2 GENE PTAFR PAFr platelet-activating factor receptor EMBV3_01953 ATGTTGCAAATTTTGTCACCTGGAGAGTAGTTAGAGATGACCCACATGACCATTTAAAAT Gene BVV0101_040607 + 0 NULL GK000003.2:34826379-34839145 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173051 TCONS_00173050 TCONS_00173052 TCONS_00173053 1 XLOC_104278 Coding TCONS_00173050 XLOC_104278 Coding Coding FAM102B 3:34835168-34848731 j TSS128741 4564 3 TCONS_00173050_2 102 6 0.663913877009291 0.0019246432802982 0.00178932098118687 0.00140888334764853 0.000597886131995321 0.00104868615398495 0.000488967458486833 8.5354994227964e-07 0.000736836096455861 0.000747505843463774 1.2882653425016e-08 1.30398738029897e-05 1.09667069552918e-05 3.92927709189592e-05 8.91984068633463e-05 8.05993992771128e-05 1.99234989991092e-08 2.54558477987083e-05 0.000258374448585794 0.001270638055139 0.00168685414108736 0.000454316756617183 4.0721585789825e-06 6.89171702142828e-05 0.00018246821830294 0.00142976484962812 0.00156898108005768 0.0012171453210096 5.81984683636572e-09 2.0207544089072e-05 1.25409162980752e-05 XM_592474.6 FAM102B PREDICTED: Bos taurus family with sequence similarity 102, member B (FAM102B), mRNA. 0.0 8114 100.00 0.985539000876424 NM_001010883.2 FAM102B Homo sapiens family with sequence similarity 102, member B (FAM102B), mRNA. 0.0 1990 72.67 0.738606485539001 0 coding 0 0 0 0 CTCAGCTGAATTATTATGAAAATCTTTACTCCTTCACCTTCTATCCATCCTGCTGCCAAGATCTCTCAGCAAAGAGTGCCTCAGTTCCAGACGAACTTGGTGCCTGTGGACATTCTAGAACATCAAGCTATGCAAGCCAGCAATCGAAAGTGTCAGGGTATAGCTCCTGCCACTCCCGGTCATCTAGTCTCTCTGAGCTCTGCCACAGAAGAAATACCTCAGTGGGAAGTACATCAACAGGAATTGAAAGTATTCTAGAGCCATGTGATGAAGTTGAGCAAAAGACAGCTGAACCAAGTCTTGATGTAGCAGATAAAGAAGATACAGCTTTAGAAATACTCAACAGATGCCCAGTGAAGCAAGATTCTGTAGAATCTCAGCTGAAGCGAGTTGATGATACCAGAGTGGATGCAGATGATATTGTGGAGAAAATATTACAGAGTCAAGACTTCAGCCTAGATTCCAGTGCAGAAGAAGAAGGACTGAGGTTATTTGTGGGTCCTGGAGGAAGAACCACCTTCGGTAGTCGTCATCTTCCAAACAGGGTGGGGTCTGGAGCTTATGAACAAGTTGTGATCAAACGCTAGAAGTCAAGCTGGTGAACTGAAGCTTCCCTGTGGGTTTAAGATGTGGGCAGTTGAGCAATTAAGGCACTTTATTCCAGCACTTAGAGCAAATGAACCTATTAAAAAAATGAAGCATGTTCGTCTATCAAGAGGAAAGCCAACACTGATTTCTTCTCTGAAGGTGCCCACCACTCTTTCTCACCTACCAACAGGGAACATCGGAATGGCAGTACCAGAGCAGTGTGCCACGTGTGGTTATAGGAACACAGCCTCTGTGGTCACTGCACATAATAATGAAAAGCCTGCTTTTTCTGTAAAAACATCCAGTGGGAAAAAACACTATACATCTGAGTATAGTTTTAGTGTTTAAGTGTCAAACCTGTGACAGACAATGTTCGACAGATTTGGCTCTAGCTTTTAAATTTTGTGTTTGCGAGACAAGAAGTGAAAATAATTTAAACTATAAATTCTGCCAAGAATAGGTATAATTCCTGGGAAGGAAATCTTCCATATTATACTCCCTACAGTATTGTACTAAATTTATTCACTCTTCTTGATGCAATAATTGATATAAAATGTGGGTGCTTGTGCTTTGGGAAAGTGTTATACTACAGTTTAAATATGTAAAATGCTTAATTCTAAATGAATCAGTCATAAATTCAAAAACAAGTGTGTGTTATTTAAGTCTGAGATACATGAATGAGTATAATGCTATTATTATGCAGTATGTGTCATTACTTGTTAATATTAGATGAGCTGCAGAATTCCCATTAGTGCTATATGAAAGACTAAGAGAAGTATAAGATTCAGTATGTTAAGCTTCCATAAGATGCCCTAACGTAAGAGCTCTGTTAACTAACAATAATATCTGCTGGGTTTAGGAGTCAAATATTAGAACAACAGGAGGAAAATTGAGATGCAGTCAGAAACAAAACTGCCTTTTCTCTGAAGATTCAAGCTTACATGAAACTGAAAATTATTCCAAGGAGGTAATGGATAAAGAACAAGGGATAGCCACTTGACCTTACTGACATGGACCCGTTGTTTTGTTTTCTTCTTTGCTGCATCAGAAATCAGTTATTTTGAGGCAAGAATAGAATACAACATACATCAAGTAGAAGTAAGAATATCTGATCTGGATCCAGTTAAATAGCACAGCAGATAAACCTCAAGAGTTTTTCTGGTCTTACATGACAGTTTCTGTGTGGAAAGATCTCAGTTTTCTTGGACTCAATTAGTCACTGAAAAAGAATGTTGCTCCTATGGAACCAGTAATTCCCAGTCCTTAACTTTCAAACCAGGTCCAAGAAATATAGTGTGTTAGAGTTACTTTGGTCTAGTATTTCCATGTTGGCAAAATAAGGGAAAAAATATTATTTTTAAAGAAAATTTATTTTAATATCCAAATTTAGAGGTTTGAAAGTGTTTGAATAATTCAGGTTAGGGTTTTTTTTTAATATTTCAGTGATTGGGTATTCCAAATTAATTCAATACTACTTTTATAAATAGATGCTGATTTTTTTTTAAGAGATAACACCCTATTTTGGGATATTTTGAATGTTGAAAGATAGAATTTTGACTTATTAGTTAAACTTTCTTGTTAAGATTTGAAGAAAAACACTGACCTGAACATTTTAGTCTAACCAAGGAAAATACTACCTTAAGTGGTAAAGACTTGCTGTCTATGAATAAACAGGTGAATTGATCCATTCATTATATATTATGGGAAGAAGAAAATCAAAGTTTTTAAAAGAGATGTGAAGATATTGTTTAGAGAGATATTTAGTATGACGTCTTAAAAACTATTTTTCTATTTTCAAAGCATTAGTTCTGTATTTTTTATTGGCATCTCTACAGATGATTTTGCAGTTTTGAAAGTGATTATGAAAACTAGATTGTAAGTTAGGTTCCATGATGACGTTCTTCAGATACATAAGCGATGCCATGGTGAGGACACTGCCCCCATCTTACTCATCCTTGACTGCCCTTGGCCCAATACAAGACTGGCTCTTGGTAGTTAAGATGATAGAGAATTCTTTTTAAAAAACAAAATGTGGAGAGATTTTGAAAATCGTGCCTTTGAGCAGTCACCAGATACATCTTGATTAATGTAGTAGTAAATATAACCAATATTTTAATAAGTAGAAACACTAGGAAGAAAAAAGATGACAGTGTCCACTGTAGTCAGTGAAAGTCTGGATTTATTTTATTCTATTTTGTGTTTTGTCAGCATACTTTGCAACTAGATTTATTTAGAGTCCTCGAAAATGTTTGTTGAAGGACCTATGTGTCTTACTTTCTAGTTTTTCTTAAACTATTGTACTATTAATATCTTAACCATGTAGCTATTCAAAAAAACTTATTAAATACCAAGTCCACTTTTGGTTCCATTTTGAGTTTAGAAAATAAATTTGAAAACTTAATAAATTTTTAACTTAAATATTACAAATTTTATTTTTTTAATATTAAAATCTAATATTTATATCACCTAGTCTTGGAGAATTTGCAGATGTATAACTTTCTTTTTTTTCCTAATCTTACCCTTGTAAAAAGGATTCATGATCTTTTAAAGCTAAGTATTTCTGATCAGATAATGAAGTGTCTTATATACCTTGGGGGGGGCACTTCCTGTGACTTGTGCTGGTGACCAAAATTAGAGAGGATGTGAAGGGTCGAAAAGGGCAGAGCAGGCCGGCCCTGGGCCATTAGTTTACACGCGCACTGTCGACTCCCCTTGGCAATGGTGGTGGTGAAGCCTTCTGTATACAGACAACTGATTCAGATTGGTTACTTAGAATCTGAGAAAGTCTTGACCAAAAATCCTTAAGTCCACCAACCCATTCCAGCAAAATACTATCAGAGTAGTGCTGTCCAAACTAGATTCTTCTGTATGTGCTTGTTGTTTTTTAAGTAAAAACCATGAGCATCTACCACTTAGCCCATTTGTTGCTAGAAGGGAAAATAATCTTCTAGCTTCCAGTCAAAACATATTCAGTTGTCAATGAGTTTTGATATGTTAAAACATCCAGAAGTATTTTTAGAATTTTAAGATTTCCATGCTAACAGACTACTTGAACGTTCATGCTAATAGTATGATTAAATACTTCATTGAAGTTCTCTGAAATGTTACACTTCCATTATATATGATAATGTTCTGAAAGAGACTGGGCTCATGTGACAGGATTGCATTTTAACAGATCTTTAACTGGGACAGTTCAGAAATTATGCTTGGTCAGTTCTCCTGGATGGTACGTCATGTTAATATAACCTATACTATAGTTGAAATTGGGTTATGCCATTACTCATATGTTGGCTTAGGTACTGTACATAGTCTTAATAGCTGAGATGTTAAAGAATATGAAGTCTAAAAATACAAAGGATGAAACAGGCCTATATTAACCTGTTTTAAGACTGCTTTGGATATAAAGGCCTTATTCCCTTATATATGACTTTTTAGAAGATAATATATATTCACAGTATATTTTAAATGGTCATGTGGGTCATCTCTAACTACTCTCCAGGTGACAAAATTTGCAACATTTTTAATTTATGTGGACAACAAACTCCACATTCACAAGTGTTTATGTTCATCCTATGTATAAAACAAAGAATTCTCTTTCTGATACTATACTCATTGACCAAATCCCATGTACAGGAAGACATTTAGGGTATATTCAGTTTGGTTTTTTTGGAGATATGTCTTATTTTGGGGATCACCTTCCTCTTATACATTTACTTGATCCTCTGGAAGTTGATAGAGTTGTGGGTAATCATGTAAATGCTTATGAATAAAATTTTATTGAAGTGATTCCATTAGTATTCTAATCTCTAATACATGGAAAATGACCTTCATATTTATATTTTTTGTTAATTTTCCAACTGTTAATCCAGGAAATGTTTTCCTTTTTTTTTATCAAAACTAATTTTTTATTGTAAAATATGAGTAATGTAAAGGTGAATCTTACACATGTTCAATAAAAATCATATCTTAAAGTTTA EMBV3_09120 CAAGAATCTGCTCTTAGTAGCCTTGTGCCTGACCTTCGGGGTGGAGGTGGGCTTTAAGTT Gene GeneID:524183|TMEM164:NM_001031762:28_cdna Constitutive 1 NULL GeneID:524183 X GENE TMEM164 FLJ22679 transmembrane protein 164 EMBV3_12177 AGTCGGGTCAAGAAGCAGAGGGAAAGGCCTGGCTTCAAGGAGCTCTGATGCAAAGCAAGA Gene BVT0102_038284 + 0 NULL GK000029.2:51098332-51176378 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36001 GCAAAGTGAATGTTGTTGCATTTCTGGTTTTACAGGTAGTGAGCCCCAGGACCAGCCTCC Gene GeneID:781101|LOC781101:XM_002693536:148_cdna Constitutive 0 NULL GeneID:781101 15 GENE LOC781101 NULL hypothetical LOC781101 EMBV3_07709 AACTGGGCCTTGACAAAGTGTAAACCCCATGGATGGACTTCCCAAGGACTTATTGATAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11063 CACTTAGTCCAGAAGATAGTACTTTCCCTGTTTTGTAGTTCACACTGGGAAGAGATACAT Variant GeneID:617904|MTBP:XM_002692838:206_cdna 194^267 1 EMBV3_10177 GeneID:617904 14 GENE MTBP NULL Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa EMBV3_15482 CTTGGAGTGATACAATTCCACACTGTGAAATTGTCAAATGTCAACGGCCATTTCTTGAAC Variant GeneID:616002|CD46:XM_002694227:147_cdna 572^769 1 EMBV3_42360 GeneID:616002 16 GENE CD46 NULL CD46 molecule, complement regulatory protein EMBV3_01630 GTTGTCGCGGTTGCGCCAGAGCGGTGCCTTCCTCTCCACCAGCGAGGGGCTCATTTTTCA Gene GeneID:516212|ISOC2:NM_001038123:169_cdna Constitutive 1 NULL GeneID:516212 18 GENE ISOC2 MGC134535 isochorismatase domain containing 2 EMBV3_16813 CCTCCTCTAAAACAAGAGGCGATGACTCCAAAACCCCAAAAGAGATTTCCAACCCCCTCC Gene GeneID:100336854|LOC100336854:XM_002690146:24_cdna Constitutive 0 NULL GeneID:100336854 9 GENE LOC100336854 NULL hypothetical protein LOC100336854 EMBV3_25695 TGAAAATGCATGATTTGAACACTGATCAAGGTGTATACCCTGTCGGTGTCGGGAGACCGG Variant GeneID:539594|BUB3:NM_001076177:51_cdna 314^465 1 EMBV3_22236 GeneID:539594 26 GENE BUB3 MGC139040 budding uninhibited by benzimidazoles 3 homolog (yeast) EMBV3_35861 GGAGGATCTGAGAACGTTAAATAAGCTGAAGTCACCCAAGAGACCAGCATCCCCATCCTC Gene GeneID:506646|SUDS3:NM_001098891:75_cdna Constitutive 1 NULL GeneID:506646 17 GENE SUDS3 MGC159395 suppressor of defective silencing 3 homolog (S. cerevisiae) EMBV3_33834 ATGATTCGGCAGATTTACGCACAGCTAAAGCACTCTCAGAAGCTAGAAATACAAACCAGA Variant GeneID:535883|HIBCH:NM_001046413:39_cdna 143^227 4 EMBV3_01031 GeneID:535883 2 GENE HIBCH MGC137758 3-hydroxyisobutyryl-Coenzyme A hydrolase EMBV3_41361 CAAGGACGATTTTGGAGTGGAAACCCTGGGAAAATCTGTAGCTCAACTTAGTGCATGGTG Gene GeneID:525099|LOC525099:XM_002691539:592_cdna Constitutive 0 NULL GeneID:525099 11 GENE LOC525099 NULL similar to rCG45771 EMBV3_07427 ATCCTATGACCGGTCTCTTAGGGTCTGGAGTATGGACAACATGATCTGCACGCAGACTCT Gene GeneID:511692|TRAF7:NM_001024521:135_cdna Constitutive 0 NULL GeneID:511692 25 GENE TRAF7 NULL TNF receptor-associated factor 7 EMBV3_05438 TTGAAAGCAGAAGTCTCGATGAAGTTGGTTGCCCACTTCCGAACACTTGGGAGCCCTCTG Gene BVT0102_158831 - 0 NULL GK000011.2:27032985-27200796 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00030684 1 XLOC_016937 NonCoding TCONS_00030684 XLOC_016937 NonCoding NonCoding - 11:27188469-27188751 - TSS21683 282 1 TCONS_00030684_1 64 1 0 0 0.000142531046114565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000560981811795427 0 0 0 NR_015385.2 Six3os1 Mus musculus Six3 opposite strand transcript 1 (Six3os1), 2e-09 66.2 82.81 0.223404255319149 0 noncoding 0 0 0 0 -0.0922662731986276 0.463025094984337 0.00289419285521651 0.953274127489882 CCGAAGGCACGAAGGCCAGGTCGGCCGGCAGGGCAGCCTCACCCCGCCACCAAAGCCAAAAGAGCGAGGCCGAGGGGTGACTCCACGTTGATGTCCTCCGCCAAGAAGCGAGTTTGTCCCCGGCGCGCGCTGGAACCACAGCTCTGCCAGCAGCCCCAGAGGGGCCCAGAGGGCTCCCAAGTGTTCGGAAGTGGGCAACCAACTTCATCGAGACTTCTGCTTTCAAGAGAAGGGCCCCGGCTGAGGAGGCGGCGGGAGGGGACTGTTGCAAACAGCTGTTCC TCONS_00024491 . 5' 147 TCONS_00024491 . 5' 147 EMBV3_26936 AGTGGAGAGGCCCCTTGCACAGTATGCCAAAGAGTTCGGTTCCAGTCAGCAGTGTTTGCT Gene GeneID:512652|SSH2:XM_002695677:201_cdna Constitutive 0 NULL GeneID:512652 19 GENE SSH2 NULL slingshot homolog 2 (Drosophila) EMBV3_13758 CATCTTGTCCTCTTGCTCTGACCCAAGCTCTGGTGCCCAAGGGCCATGTATCCTAATTCT Gene BVT0102_093089 + 1 EMBV3_26176 GK000011.2:78719308-78862494 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025652 1 XLOC_014799 NonCoding TCONS_00025652 XLOC_014799 NonCoding NonCoding - 11:78786607-78797452 - TSS18562 1032 1 TCONS_00025652_4 170 0.289728682170543 2 0.905016599040944 0 0 0 0 0 0 0 5.73131281553645e-06 3.05819285467301e-05 0.000175424442347863 9.76007532642174e-05 5.19721604093362e-05 0.00158980923707942 0.0022801378202592 0.00228670650951443 0.000307111330031554 0 4.86258397494684e-05 0 0 0 0 0 0 0 2.73079732392735e-05 0 9.3073392051403e-06 1.17601838539107e-06 5.82582278194929e-06 NR_001464.2 XIST Bos taurus X (inactive)-specific transcript (XIST), non-coding RNA. 3e-14 84.2 91.94 0.0591085271317829 NR_040064.1 LINC00862 Homo sapiens long intergenic non-protein coding RNA 862 (LINC00862), non-coding RNA. 3e-14 84.2 90.48 0.0591085271317829 0 noncoding AAATACAAGAGGCTTTGCAGATGTAATTAAATTAAGACTCTTGAGATGGGAGATTATCCTGGATTATCTGGGGTTGGCCCTAATGCAATCACCAGGGCCTTTATAAGACAGAAGCAGGAGTGTCGGAGAGGTCCATCAGAGAAATAGACCAGAGTTGAAGGTGCTACCTCGCTGGTGTTGAAGATGGAGGAAGGAGCCACGAATCAAGGAATCAGGTGGCATTTTGAAACCAGAAAAGGAAACGACATGATGAGCTGAAGAACACGTGGCCTTAGAAGACAGAGAAGAAGGTGGAGTGGAAAGGCCAGGGACTAGAGAGAGAACCCTTGTTGGGAGCCCACTGGAGAATTCTGTCGTTGAGTGAGATCAGTCAGGCACTGATCTGAGAATTAGGATACATGGCCCTTGGGCACCAGGGCTTGGGTCAGAGCAAGAGGACAAGATGCCCCAATGCCCCTGATGATCTTGGCCTCATCTGCAGAGAGGTCTGTCCCGCCACCGCCAGCCCTTGGCATGTTCTGCACTCAAGAGACACCAGCAATCTCGATGGCGAGGGGGGCCACCTGGGGGTGGGCAAGAGGCATGAGGTCATTGTGTTGAATGCTCACCCCTCTTCACACCCCACTCCAGCACAGCCTAGAACAACCACTCCCACGAGGTGGACCTGGGAACACAAAGATAGCAAGGTATGCGGCTGGGTCCTGGCCCCAGACCTGCTCGGAAGACAATCAGCCCAGTCACAAAGAGCTTCTCAGAAGAGTTTTATTGGGGTGCATGTGTGTCTCCTTCACTGTCAGGCACCCACTTGCCTCCAGAGAAAGGGATCCTTCATCCCTCACGTTAGTCATGAGTCCCTGCACAAACAAGGGGCCTTTCCACGGCTTTCCCACCCACCCTGGGCCAGAGCCTAGCACAGAGGCTGGCTCAGACAGAGATGCTCTGTAGTTTCTTATGAATAAACGAAATGAAGTGAAGGGAAGTGAAATGAAGTCAGCTCAGTCGTGTCCGACTCTTCACGACCCCATGGACAGT TCONS_00025655 s 5' 64594 TCONS_00025649 TCONS_00025650 s 3' 66574 EMBV3_00688 TGTGACACCCAGAGAGCAGAATTAACTCCTTCCTTTCTCCCTGCTTGAGCTCTGCCCCCA Gene GeneID:515444|ACAP3:NM_001083687:130_cdna Constitutive 0 NULL GeneID:515444 16 GENE ACAP3 CENTB5 MGC151806 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 EMBV3_08557 TGAGAAGTGTCCCACCTGCCCTGACGCCTGCACCTTTAAGAAGGAGTGTGTGGAATGTAA Gene GeneID:282642|ITGB3:XM_002696060:378_cdna Constitutive 0 NULL GeneID:282642 19 GENE ITGB3 INTB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) EMBV3_10627 TCATGACAATTCAGAAAAATGATAGCTCAGATCAGAAAAACAGTGCAGACTTCAAAGTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33571 GAATCAGTGGCCAGGATGACTATTGAGGATGTGATGAGTTTAGGGATCACACTGGTGGGC Gene GeneID:538797|EPHA7:XM_002690178:47_cdna Constitutive 0 NULL GeneID:538797 9 GENE EPHA7 NULL EPH receptor A7 EMBV3_29248 GATACAGGAGGGCCGAGGAGCGCTCCCTGACTTCGACATCGAGATGCTGAAGGTGGAGAA Variant GeneID:360190|AIP:NM_183082:494_cdna 93^458 1 EMBV3_24443 GeneID:360190 29 GENE AIP MGC128254 aryl hydrocarbon receptor interacting protein EMBV3_25844 ATGAATACTATAAAGCTCAAGTCACTGGGGTCGCACAGAGTAGGACACGACTGTAGCAAC Gene GeneID:100126272|CD302:NM_001110191:38_cdna Constitutive 0 NULL GeneID:100126272 2 GENE CD302 DCL-1 MGC126908 CD302 molecule EMBV3_33014 CTCCCACCCGTCGTCACCTGCCCCTGGGAGTTTTTCGTAAGCCCCACTATTGCTTTTAAA Gene BVT0101_007282 + 0 NULL GK000016.2:47693842-47719087 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067378 TCONS_00067379 TCONS_00067380 1 XLOC_041432 Coding TCONS_00067378 XLOC_041432 Coding Coding NOL9 16:47678490-47696890 j TSS50683 5038 1 TCONS_00067378_3 694 0.0232235013894403 13 0.726887330833197 0.000385835782432762 0.000105541344613934 0.00012129110473761 0.000321583229614866 4.26288133081638e-05 1.32876866882887e-06 9.75221365818044e-05 1.88126332730196e-05 9.6617536402382e-05 0.000735211263186185 0.000966983821181207 0.000199046020115655 1.6007463172988e-05 0.000175177580953706 4.14451442690325e-05 0.00514781472555035 0.000205310764351439 0.00362465881086792 9.10113906548323e-11 2.41074717505279e-10 7.23654117261973e-12 0.00217568863548483 0.00055043253160722 0.00245993546928522 8.24667650218004e-13 1.13667639732531e-08 7.20254047832709e-08 0.000243755217293696 0.000561948486256052 0.00100084906541569 NM_001206599.1 NOL9 Bos taurus nucleolar protein 9 (NOL9), mRNA. 0.0 3815 100.00 0.419610956728861 NM_024654.4 NOL9 Homo sapiens nucleolar protein 9 (NOL9), mRNA. 0.0 1815 76.51 0.478165938864629 TCONS_00067378_3 sp|E1BPN0|NOL9_BOVIN NOL9_BOVIN Polynucleotide 5'-hydroxyl-kinase NOL9; 0.0 1431 100.00 0.998559077809798 2 coding 0 0 0 0 -0.0191337412661695 0.896337993649916 0.0131499060880863 0.779109293979378 ATGGCGGACTCCTTACTGCTGCTCAAGCGGGTTCCCTCCCGCCACACGTGGCTGCGGGCCCGCAAGGCCCGGCCCCAGCTCATGCTCAGCCGCCGGCCCCGCCGCCGGCTCCGGAACCTGCGCTGGCGCAGCCGAAGGCGGCTTCGGCGACGGCTGCTGCAGGCCCAGGCAGCCGGCGCGGACTGGCTGCAGGGCGGCTGTCTGGTGTCCGGCGACGCGGCGCTCCAGAGGCTGAAGACCTCGGCTCGCAGGCGGGCCTCCAGCCCCGAGCCGGCCGAAGATCCGGTCCCGAGTGGTCCCGCGATCCTCCCCATCCCGCCGGTGCGGCCGGCTGGCTCGGGCCGCGCTGTCCTGCTGCTGCCGCTGGGGCAGGGCTTTACTTTTAGTGGGATCTGTTGTGTGACCTGCCTCTACGGCCAGGTGCAGGTGTTTGGTTTTACCATCAGCCAGGGCCAGCCTGCCCAAAATGTCTTCTCCACCTACACCCACTCTCGTCTGACCATCAATGCTGTTCATTATTCAGTGCATGAGAAAAGCAAGAAGGAGATGAAGAGAGAAGCCCGAGTTCTGCTCAGACCTTATCTGAACCAAGATGACAGATATTGTTTGATGAGCAGTTTTTCTCCTCTGTGTTCCATCGTGTTGCTGGAACGTCTGAAAACCTCCACCGTGAACTTTATAATCAGCCATCCAGGTTTATCTTACATTTTCGTACAAGAGGTCCGGACTTTCCAGATTAACTCTGAGTATTTTGCCTTGAGATCTGTGGGTATTAGAAGAGAGAAAAAAAAAACTGGCTTGCGTTTAACGGAGAGCGCCTTTGCAGTTATGGAAGAGTTAGTGAGCATTTCTAGCGAAGAAGCAGACAGCTGCCCCGTCATTCTGGTCTGTGGCTGCCAGGACATTGGAAAGTCAACGTTTAATAGATACCTCATTAACCAGCTGTTAAATAGTGTATCCTGCGTTGATTATTTGGAATGTGATCTGGGGCAGACAGAATTTACTCCTCCGGGTTGCATTTCTTTGCTTAATATTACAGAACCAGTTCTAGGACCACCTTTCACCCACCAGAGGACACCCCAGAAAATGGTCTATTATGGGAAAACTTCTTGTAAAAACAACTTTGAAAACTATATTGAGGTAATAAAGTATGTTTTCAGCTCCTACAAGCGAGAGTCCCCTCTTATCATCAACACCATGGGCTGGGTGGCAGACCAGGGTCTCTTGCTTCTCATTGACCTGATCCGCCTGCTGTCACCCAGCCATGTCGTCCAGTTTAGCTCGGACCGGAGTAAATACATGCCGGACCTCACCCCCGATTTCGTGGACGACATGGACGGCTTGTACACAAGACGCAGGTCCAGAGTCAGAAACAGAGGGTTCCACCTGCCCGAATTTGCTGAGAGTTTGGAGTTTGCTGATGAAGAAAAAGAGGGTCCAGTTATGTCTACGGGATACAAGCTGATGTTCGTGAAGTCAGAGTTTGTGACTGGAAAAACGTCCAGGAATAGAGAATCACATAACAGAATCCTCCGTGAGCTGGCAGTGCTGGGTTACCTGAGCCAGTTGCAACCCCCAGTGCCGAAGCCACTGCGTGCCTTACACGGTCTGACCCCCTATCAGGTCCCTTTCAATGCCGTCGCGCTCCGGATCATCCACGCTGATGTGGCCCCCACCCACATCCTGTACGCCGTGAATGCCAGCTGGGTCGGGCTCTGCAAGATCCTGGATGACGTCAGGGGATACGCCAGCGGGCCCATCCTGCTTGCCCAGAGTCCCATCTGCGATTGTGTGGGGTTTGGGATTTGCAGGGGGATCGACATGGAGAAGAAGCTTTACCACATCCTCACTCCCGTGCCCCCAGAGGAGCTGAGACACGTGAACTGTCTGCTGGTTGGGGCTGTGAACATCCCACAGTGTGTTCTCAAGAGCCAGGGTGGGCTCGAAGGGACCATACCTTATGTCACAACAGATTATAATTTTAAGCTTCCTGGAGCATCAGAGAAAATTGGAGCAAGAGAAAGTGGGGCAACGTATAAAGAGAAAGGACATCCCAAACCTAAGTTCTATCGAAAAACATACTGATGTTCTTAATACAGGAAGGACCTTCCTCCCAGAAAGCTTGACCATCTCCAGCCTGGCATCACTGGACGATGGGGTCTGTGACCGTGAACAGAACAGCATGCTTATGTAGCAAACGGTGCAGTTTCCTGCGTAGCTCATGGATGCATTTAGCGTACGTACACTTTTCAATTGACATGACAGAGGTTTTCCCTAGTCTTCTGTTTCGTTTTCTAAAGGAATCAAGAAGCAGGGACGAGTTCGTGCACCATTGAAACAGAACGTGGTCGATTCCTCATGAAGTTTTTCAAGGACCTGGTTGCTGGTATCTGGATAAAAATAGAGAAACCAGACCACAGAAATGTCTCAAAGGGGAAAGCAGGACATCTGGTGGGATGGAGAGCATAGAAAGGTTTCATAGATAAAAGTTTGCCTCAAGAACCCTTCATCTTTTAAAAATCTGATGCTGAAAAATTTTACCCTGAAAAAATACTCTCAAACCCAGGAAGCCTGTCCTGGAGCCTCTTTAAAACTCAGTTTGTCCTGATTGACTTCTCATCTGAGATGGAAACGCACAGTGAGCAGGGCCGGAAACCAGGCTGTTTGGACCAAGGCCCAGCGGAGCGGCTCCTGCTGTTGGTCTCGGTGGCTGGACACAAATGCCAGTGGTGGTGCTGGACCCAGGGGCTTCGGAGGAAATGGTGGCCCTTCATCTTCTCTCCGGAGTCAGCGTTCTTTAACCTCCAGGGTTGGAAATGGTTTGGTAAACAGGCGGGCCGGTTCACATCACATCGTGTCTGCGTTTAGGACCCTGAGATGCCTGCAGAAGCAGCATTTCGTCCTGGTGCTCTGCATTCCGGCTTCCGAGCAGGACGCCTCGAAGGACCACTGTTAGGATGAGGGTTTTTACGGCTTACGTCCATTTGAGGCGTTGATCATCATTGTCCTCAGTGTTCTGGGGGCCGATCCCTCATGTCATAGAGCTCTTGTCACCCTCCAGGATCGGCTTCGATATTCAGAGACCATTTAAAGTCTAGTTTCTTAGTTGCATCTTATTTATATCTAAGTTTAACTTGTACATACATGTTCTGTCTTGGCCTTGCGGTGACTTTTGCAGTCAGTCCACCATTAACTTTTTTTGCCTTCTTCACAAGTTCCTGTATCATTAACAGTGATGCTTAAGGTCTTTAGCAGTAAGTCTTGGGAAGAATGAAAGTGGTGATCTGTCATTTGCATTTTCATTGAATCCTGACTCATTAAGTCCTGGTAGGCTGTTTCCTGCGGGCCTTTAAGGTTGCCTGCCAGTCCCCATTGGTAAGGAAAACAGTGTTGCCACTAGAGGGAGCTGTCAGCCATTGGTCAGCTGGCCATGCTGGGCTGGAGATGGCGGAGGAGCCCCTGGAGACCTTTCTCAGCGTCTAGAGATGCTGGAGACGGCCCTGTGGTCAGCACCTGGGTGTGCCGTTCAGACGGGCAGCGGTGCACACACCCTGGGTGTTGGCCCGTTGGATAATCAGTGTTGATGGTGCAGGCTTCTGTCACTTCCACAGCATGTGTTGCTCCAGGACGGCCAGTGAGGGCTCTGTGTTGGAGATACGCTTGGCAAATACTCCTGGGACCTCCCTAGTGGTCCATTGGTTAGAGCGCTGCGCTTCCATGGCAGGGGGCAAGGGTTCAATCCCTGGTCGAGGAACTAAGATCCTGCATGCCGAGTGGGATGTGAAAAACCAAACAACTCTTAGTCATTTCTGTGTGATTGTCAAAGCGGTACATAACTTATTTTAAGAAAATCAAATTAATATCTGACTTAGAACATGGGAGCCCTCAATCACTGATTTTGTGGTTTGTTAAAATCAGTTCTTCAGACCTGTTTTTAGGACAGGTAAACATGAAAAATGGAAAAAAATCCTCCAATCTTAGGGTTGATTTAATTTTGTGAAGAAAGGTAGTTCTGTGGTTCCCATCGGTCCCCAGGTAGGTCTTGGGGACAGGAACCAGTTTGTCCTTGGAGACCCCAGTGTAGAACTGAAGTTTGAGAAAGGGGAGAGGAGTAGGTGAGCTGGCCTTGGGATTATGACTTTTGAGAAAACAAACTCTTGAGACTGGCCACCTGGAGAGGATACGGGGGTGGAGAGGACGTGGTGAGGCCCCAGCTGAGCCAAGGGGCCCCCCTTGCCGATATCAGGACCCCTGTGATGGGCAGGTCCCCACCCTCTCGGATACTCAGGTCTCTGCCTGGAAGATGGCATGAAGAGGACCAAGTGACACGGGATGGTGATTTTTAGATTGTCTGCTCATTCTTTCCCTTAGATTTGGGTGAGGCCATGTGGCTGTTATCATGGCAGGCTGTGATGTTGGAGCTCCAAGTCCATGTCCTGACTGGGCCACCAGCTGGCAGTGTAGCTTTGAGGGGTGTTTCACTTGAGCCTGTGACCTTCTTTAAGATGGGTGGGTGGCGCTTCTCTCGGGTCCCTGCATGAGGAAGGCGTGAAACGCATCCACAGCAGGTCTAGCCGTAACTCCTGGCCTGTGGCCTGTCTCTGGCTGGGTTGTAAATCCTAGCAGACAGGAGGAAGACTGTGTTCCTCAGAGTCACCTTGGGTCGGAGCGGAAACTCAGTGTTCACATCTGAAAACATCTTGCCACGGCCCCCAGGCAGTGGCACCGTTCTTCCTGCTGTGGGTCCTGCTCAGGCTCCCACCCGTCGTCACCTGCCCCTGGGAGTTTTTCATAAGCCCCACTATTGCTTTTAAAATCCTACAGTCAGCTCACCTGTGTAGGAGACGATCCTGAAGTCCACCGCCGTGTTATCACTGTTGACGCCGTGACCTGTCTCACCCAGTATTTTTCTAAACTGCACATGTGCGTTTGTGTGTTTTACAAACCTGTTTGTCCAATTGTATGTATGGTTTCTATCCAACTTTTTTCACTTACATGTGAACTTCTGTATCAATAAATATTTTTGAGAATGTAAATT EMBV3_34921 GCCATCTGTCGTCCTTTACACTATTCGACTGTCATGAACCCTAGAGCCTGCTATGCCTTG Gene GeneID:515867|LOC515867:XM_002690755:502_cdna Constitutive 0 NULL GeneID:515867 10 GENE LOC515867 NULL similar to olfactory receptor 732 EMBV3_00867 GGTAAGTACAAAGCGTGTTTCGTCTCTTGGACCCATGGCTGTCTCTTGTTAGTCTGACCC Gene BVV0102_091302 + 0 NULL GK000001.2:2742195-2781251 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20102 TGAGGCGTTTGTCTCGCCCGCTGGAGTGTGCTTGTTTTCGAACATCCATCTGGGATGAAA Gene GeneID:614531|LOC614531:XM_002685248:34_cdna Constitutive 0 NULL GeneID:614531 2 GENE LOC614531 NULL similar to Ras-related GTP binding A EMBV3_08007 GTGGCTTCCTCTGCCAGGCCCTGCACACGATGTGAAGAGTGAAGAAATGCCCAGTTCTTA Gene GeneID:540138|TMEM109:NM_001046470:170_cdna Constitutive 0 NULL GeneID:540138 29 GENE TMEM109 MGC137697 transmembrane protein 109 EMBV3_19767 TCCTTTCTTCCAGCTTTTGGGAGCAGGGGAGGGGGCAGCAGCAAAGGTGGGGGGATCCTT Gene GeneID:509936|ADCY6:NM_001143877:56_cdna Constitutive 2 NULL GeneID:509936 5 GENE ADCY6 NULL adenylate cyclase 6 EMBV3_37385 GGACCTGTCCTAGATGTCTGCTGGAGTGATCACGATGCTCCTGTCAAAACAGTACATTGG Variant GeneID:513080|RAE1:NM_001015585:1018_cdna 477^563 2 EMBV3_23225 GeneID:513080 13 GENE RAE1 MGC134058 RAE1 RNA export 1 homolog (S. pombe) EMBV3_23074 GATTTAGCCGAAAGTGATGAGGAGAGAAAGAGAAGTGAAAAGCCAGAGTCTCCACTGGTG Gene GeneID:100336390|LOC100336390:XM_002690211:5_cdna Constitutive 0 NULL GeneID:100336390 9 GENE LOC100336390 NULL hypothetical protein LOC100336390 EMBV3_21138 AGGGAGAAAAACTGGGCACTCTGCTGCCCTTGCAAAAAGTTTACCCTGGAATACAATCCC Gene GeneID:281899|LECT2:NM_174380:4_cdna Constitutive 0 NULL GeneID:281899 7 GENE LECT2 NULL leukocyte cell-derived chemotaxin 2 EMBV3_10764 GTCTGTATCAACTGCAGAAAGTCTGACCTCCCTCCGGTCAGTCTCGCCCACCTTATTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32096 CTGGAAAAATCAGAGGCCCTTCTAGCCTTGACTCAGTAGACTTTGGTACTGCCTCACCTC Gene GeneID:511043|LAMC2:XM_002694208:52_cdna UTR3_Alt 2 NULL GeneID:511043 16 GENE LAMC2 NULL laminin, gamma 2 EMBV3_19330 GGAAAGACCCGGTGAAAGAGTAAGAGGCAGGGACACACTCAAGACACCAACACCTACTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40849 GGTCAGGTGTTCAGTTCCTGATCAGCCACCTGATCAGTGCGCGCACAGTCCCTTGATCAG Gene BVT0102_325978 + 0 NULL GK000030.2:92591235-92647395 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201913 TCONS_00223729 TCONS_00232668 TCONS_00232661 TCONS_00223718 TCONS_00223727 TCONS_00232659 TCONS_00070446 TCONS_00201908 TCONS_00009410 TCONS_00199378 TCONS_00187682 TCONS_00187685 TCONS_00112238 TCONS_00219910 TCONS_00187642 TCONS_00223737 TCONS_00223730 TCONS_00187681 TCONS_00232671 TCONS_00223731 TCONS_00032894 TCONS_00029994 TCONS_00070442 24 XLOC_123558 XLOC_137028 XLOC_142153 XLOC_142146 XLOC_137017 XLOC_137026 XLOC_142144 XLOC_042224 XLOC_123553 XLOC_004966 XLOC_121031 XLOC_113727 XLOC_113730 XLOC_068135 XLOC_133227 XLOC_113687 XLOC_137036 XLOC_137029 XLOC_113726 XLOC_142156 XLOC_137030 XLOC_019130 XLOC_016249 XLOC_042220 NonCoding TCONS_00232661 XLOC_142146 NonCoding NonCoding - 8:74692570-74693095 - TSS174165 525 0.48 1 0 0.000223132196698084 4.78496593467767e-05 1.57380930354695e-05 0.000294674826678528 0.000141196539001957 0.000193952978172736 0.000331874410159828 0.000447994370763294 0.000968232067260911 5.46360077146037e-05 7.26950806037389e-05 1.51622090023212e-05 7.73816596605703e-05 0.000356959922186706 0.000233746092851011 7.17483633990191e-05 0.0017154928917723 0.00010719095647773 0 0.000148699057429922 2.36754668988188e-05 2.9211475717532e-05 2.62116616123525e-05 0.000189126119188786 5.85752852725236e-05 0.000309144110603884 0.000178816211240597 6.76137610226888e-05 3.46757424147715e-05 5.39193573239333e-05 XM_866575.4 NEK11 PREDICTED: Bos taurus NIMA-related kinase 11 (NEK11), transcript 1e-41 174 91.13 0.234285714285714 0 noncoding TTAAAGGGAAGAATGACAAGGAACTTTATGAATTGGAGCTTTAAGTTAATTCTTTGACAGAGAGAGCGAGATGGTGGTGGGGGACAGCCCGCAGTGAAATCAGAGGTGAGAGCACAAAGCAATACAGTAGGCAGACTCCGGTTTTTCTGGGGGGGGGAGTTGCTGGAGAACATCCGGGTGGACTCCTGAGGCTCGATCCCGCATTTGGGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCCAGAGTGGAATGCCTCCCCGGCTCCCGGCACTTGATCAGTGCATGCTCAGTCACGATATCAGTGCCTGCTCAGCCACGTGATCACTGACGGCACAGTCACGTGATCAGCGCCTCTCAGTCACGGGATCACCGTATGATAAACACGTGATCAGTGAACGACCAGCCACGTGATCACTGCATGCGCGGTCAGGTGTTCAGGTCCTGATCAGCCACCTGATCAGTGCGTGCACAGTCCCCTGATCAGCGCCTGTCAGTCACTGATCACTGCCTGATAAACACGTGAT TCONS_00225866 . 5' 140536 TCONS_00225866 . 5' 140536 EMBV3_01503 TTTTTCTCTTTGAATTTCATCCATATGTGGATGTGGCTTCAAGTAGAAATCAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_05308 GCCAAATGGAATACCATACAAATTAGCTATTTAGTTATTTGAATTCACTTAAAAAACACG Gene GeneID:614942|TRAT1:NM_001163943:113_cdna Constitutive 1 NULL GeneID:614942 1 GENE TRAT1 NULL T-cell receptor-associated transmembrane adapter 1 EMBV3_01837 TGGGATGACAAGAAGCCACATTTCGTGGAAGGCTGGGGATGCCCTCCTACTCGTCCTTAA Gene BVV0102_064625 + 0 NULL GK000021.2:23095268-23119314 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123120 1 XLOC_074674 NonCoding TCONS_00123120 XLOC_074674 NonCoding NonCoding - 21:23117857-23118379 - TSS91879 522 1 TCONS_00123120_1 45 0.293103448275862 1 0 5.21290590690216e-05 0 0.000336830640501304 0 0 1.37052241996293e-05 2.23437179690162e-05 0 0.000906912483396211 0 0 5.479980138491e-05 0 0 9.39885223531205e-06 0.00116372980593395 0 0 2.74749204384677e-05 0 0 0.000227453405723144 0 0 3.98189043129244e-05 0 0.00231223483192845 0 1.86000264607579e-05 0.00016124823092728 XM_005213781.1 USP12 PREDICTED: Bos taurus ubiquitin specific peptidase 12 (USP12), 7e-06 55.4 90.00 0.0747126436781609 NM_182488.3 USP12 Homo sapiens ubiquitin specific peptidase 12 (USP12), mRNA. 7e-06 55.4 90.00 0.0747126436781609 0 noncoding 0 0 0 0 0.031476047371742 0.830480175222242 -0.0047018896517157 0.922455530280904 GGCGGGAGTGAGGGTGGGTCCGAGGTGGGCAACTCCAGGGTACGTGATGTACACCCAGGGGTGCCACCCTCCAGTTTATCGTGGGAGGAGACCCAGCACAGAGAGGCTAAGGGATTCGCCCAAGGTCACACAGTGAGCGGGTGGCGATGTGTGTGGGGTGCCCTTCTGCCAACGCGTCTGGCGTCATCACAGGCCTCCTCTGGTTAAGGACGAGTAGGAGGGCATCCCCAGCCTTCCACGAAATGTGGCTTCTTGTCATCCCAGCCTCCCAGTCGCCGGTGTAGGCGGGCCTAGGGCTCCAGGTCTTGGCGCGCGAGGACACGGACTGAGCCCGAGTCAGTAACACCCGTCACCGCCCCCGCCCTCCTGGCTCTTGAATGGCTCAGTGACAGGGCCCTGACCGAAGTCACACAGCTGCTAAGTTCCGAAGCCGGGATTCGAACCCTGCGGTATGGGTTTTAGTGGCCTCAGGCCGGAGATCAAGACCACTGGCTCAGGGGTGACCACGTGCAGCCATGGGTA TCONS_00118852 TCONS_00118853 . 3' 776 TCONS_00118852 TCONS_00118853 . 3' 1297 EMBV3_24621 CAGGGGCACGGACGCCTCGCCAGGGCTGTTTCTGTTCTACTTTTTTCATTAAGACTGGAA Gene BVV0102_012136 + 0 NULL GK000013.2:46835262-46886179 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37296 CACCAGACCATGCCCCATCCCGGACCTTCTATTTATATACTGTGAACATCCTGTCAGCTG Gene GeneID:507314|POLR3C:NM_001038511:62_cdna Constitutive 1 NULL GeneID:507314 3 GENE POLR3C MGC133926 polymerase (RNA) III (DNA directed) polypeptide C (62kD) EMBV3_03210 AACCATGAACTCCTATGAGCTGAGGCTGGCGCTGAATGCGGCGGGCTTCCACCTGAACAA Gene GeneID:530544|CAPN12:XM_002694974:141_cdna Constitutive 0 NULL GeneID:530544 18 GENE CAPN12 NULL calpain 12 EMBV3_29006 CATCTGGGCCTGAAGAAGGGCTATCAAATGGTGGTGAATGAAGGTTCAGATTGGGGCCAG Gene GeneID:100335621|LOC100335621:XM_002697045:507_cdna Constitutive 0 NULL GeneID:100335621 22 GENE LOC100335621 NULL histidine triad nucleotide-binding protein 1-like EMBV3_24265 ACTGTTGTTTGCCTTCCTGCCTTGTTTTGCAGTTCTGCGGTATGACTGAGGATGGTGACG Gene GeneID:515071|PHACTR3:NM_001102019:1081_cdna Constitutive 0 NULL GeneID:515071 13 GENE PHACTR3 MGC155239 phosphatase and actin regulator 3 EMBV3_36644 CCCCGGCTCCTCTCACCCGATGGTCCCCGTCTCAGTTTGCTTTTGTTTTAAGGAGGATAT Gene GeneID:511899|INSIG1:NM_001077909:640_cdna UTR3_Alt 2 NULL GeneID:511899 4 GENE INSIG1 MGC142724 insulin induced gene 1 EMBV3_36392 GCCTCTTGGAATAAGAGTTAAAAGGTTCTAAAGGTTTGGGCCACTGGGGACATAGATCCG Gene BVT0102_350400 + 1 EMBV3_14815 GK000012.2:54147845-54452887 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035406 TCONS_00035404 TCONS_00035405 1 XLOC_020898 NonCoding TCONS_00035406 XLOC_020898 NonCoding NonCoding - 12:54159744-54231201 - TSS25960 2623 2 TCONS_00035406_2 85 0.320625238276782 3 0.96333407971339 0.000553898310345621 6.94463177250287e-05 4.96163615257513e-12 1.31582778553141e-15 0.000184449115054897 1.22207663842628e-05 0.00014609950992269 0.000111614401019344 7.41718981151655e-08 1.04302942270475e-05 0 0 1.00369803226254e-15 1.25414258239859e-05 3.60867805686698e-05 0 0 0 0.000165338921048079 1.89856742372332e-12 6.24917679660905e-13 0 0 0 8.49409302802557e-05 1.25586315625444e-08 0.000101573932024828 0 0 0 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 2e-59 235 85.45 0.0796797560045749 0 noncoding 0 0 1 1 -0.00813861721543846 0.952672581076459 -0.0275224025804211 0.564740294088987 GATGGCCCTGTGATAAACTTTTCTCTGTTCCAAACTCCAACATCTCAGTTTGCTTGGCTTCACTGTTCAGTGGGCTCAGGAACTTGTCTTCAGCAACAAGGACTGTACCAGAATTTCTAGCTTGCACAACAAGGTGAAGTCTGGATGGTAACTTGAGAAGACGTGTGCAATGGGTTATAACTGCCTGGCTACACAAAAGGCCTCAAGTTGGCACAGTCAGTTACCTCCGAAAAGGGACAGACTCAAAGGTCTTTGTTGTCAGCTCTACCCTAAATCACATGCCTGGGAAGGTAGCCCCCTGGATAGTACTTATGGCCCCTAATTGAAACTCAGTTCTCTAGAAGTTCACTACTGAGTGGATGTGGGAAGAGATAACAGGTGGACACATTTTTGACCTTGGCATATACTGGCATTCATGAAGAAATCAGCGCCTCCTCCCAGGCACATCTTGGTGACTTGCAGAGTGACTTGGCATCATGTCTGACCCTTGGAGGGAGGAGGAGAAGGATGAAGAAAGGCTAAAAGGTGGACGTACTTTCTCCTCAGACGTTCTATTTGTCTCCTTCCATGAGATTTATTTTTGGCACACAGAAGAGCTTATCCATAGGGGGACCATTTTAAAATTGCTTGTGAAGAGCCGGCTTCCTTCCAAGAGGAAATGTAACCTTGTCTTCATCTGGCACATCAGATCAATGTGCTGTAAAAGATCATGTTCAGTTACCTCATTTTTTTGAATTAGAATTAATGGCTCATTAGTCTTGATCATATCAATATTATAACACCACTTCCACTTGATAGAAGAAGGAGGAATGCTGGCAGAGTGCACTTAGTCCCCTGACTCTTGGTGAACAGACCACATGCCTGCCTCAGGGAAAGCCAGAGACATCATGGAGGTGGCCCTTTTCAAACCCACCCCATTTAGGGCAAGCGTGGACCCTTGTGTCAGAGCCTCTTGGAATAAGAGTTAAAAGGTTCTAAAGGTTTGGGCCACTGGGGACATAGATCAGCATTTCCCCCACTTTTTAGCAGCAGACCCCAGTCGGGCAACCAGACACCCACAGCTTTTCTTTGGCCACATGTCAGACCATATGTTGGAAACTGGAAAAATAGACATTAAGACTCTTCTCTTGAACCTTTCTCCCATGAGGAATGTCATATGACATTCCTCAAGGAGCATATATTTCTGCAGGACTCAGAGAAACAGGCAGGTTGACTCTTTTGAAATAAACATAAGAAACATTGGCAAGCACAAGATGATATTAAGAATTAACCCTTTCCCAATCCCTAAAATTTGCCAGAAGAAACACCAATCAAATGGGCTCTAAAAATATGCTGTTCTGGGCTTAGTCACTCAGTCTTGTCTGACTCTTTGTGACCCCATGGACTGTAGCCTCTAGGCTCCTCTGTCCATAGGGATTCTTCAGGCGGGAATACTGGAGTGGGTTGCCATGCTTTCTTCTAGGGGATCTTTCCAACCCAGGGATCAAACCCAGGTCTTCTGCATTGCAAGTGAATTCTTTATCATCTCAGCCTCCAGGGAAGCCCTCTAAAACTATAGCAAAGAAAAATCAAAACTGCCTTTAAGAAAGGAAGCACTGGACCAGGAGTCGGGAACTCTGGCTGTGTTCTTGGTGTGGTCATTAGCTAACAGTGTATCATGAGTGGCAGATGTTTGTTATTTTTTGCCTGCTGGCATGGTTTTCCTTTAGACATTGTCCTCATTCTCACCCCACAACTGTTGGGCTGTAAACCTATGGTACTCAAGTCTGTATCTTACCTCCCTGGCCACAGTCATGGACTTGAGGATGAGTACACAACCAAGCCAGGCCACTTAGGGGCTTCCCCTGGGAATTTGCTAGATGCATCAGGAATTATGAATCGCCAGGATAATCCAAGCCAATAGCTACTCGTCTCTGTCTTTGTCATAGAAAGGCAACCCAGAGAAAGCAGACTTAAGAAACTCCAGGGTGATGCAGAGCTGGCTGGTACATATTTGAACCCCTGCAGTTGGTCACTCCGGAATCCCCTTTTAAACTGGGTAAAAGCATCCCTTTAGTTTCAGATGAGATTTGGCCACTTGGAACCTGATTATTACATTTGTATATTTGGATTCACCTCTCTGAGCCTCCCTTTCTCATTAGTGAAGGAAAATCGACAGTTTAGTAGATTTCTAAGTTTCTTTCCACCTCTGAGCATTTTTAAATTTTAAGTCTAAATCTCTCTCTCTTCTTTTTTTGAATAATTGAAGTATAGTTGATTGAGAAAGAAATGGCTACCCACTCCAGTATTCTTGCCTGGAGAATTCCATGGACCGAGGAACCTGGCGGGCTACAGTCTGTGGGGTCACAAAGAGGTGGACACGGCTGAGCGACCAACGCTGTCACTACTGTCATAGTTGATTTACAGTGTGTGTTAGTTTCAGGTGTACAGCAAAGGGATTCAGTTATGTATATGTTCTTTTTCGTATTCTTTTCCATTATGGTTTATTACAAGATATTGAATATAGGTCTCCGTGTTATACAGCAGGACCTTATTGTGGGTCTATTTTATATATACTGTTAATCCCAAACTCCCAATTTATCCCTCCCCCTCCCTTATTTTCCCCTCTGGTAACAATACATTT TCONS_00037053 r 5' 10847 TCONS_00037053 r 5' 10847 EMBV3_05272 ACCTCCCACCGTCTGGATGATAGAGGTGCTTTGTGTTATGTGGGGCCGGATATGAGGGTC Gene GeneID:526668|LOC526668:XM_002688926:106_cdna Constitutive 0 NULL GeneID:526668 7 GENE LOC526668 NULL similar to C19orf28 protein EMBV3_31082 TCAGAGTTCTTTATTGATGGGCTCGGGAGTCTGCTCGTGGGGTCCTGCTCAGATGTGATT Gene GeneID:508108|B4GALNT2:XM_002695939:360_cdna Constitutive 0 NULL GeneID:508108 19 GENE B4GALNT2 NULL beta-1,4-N-acetyl-galactosaminyl transferase 2 EMBV3_08977 ATCAGAGACTAACATCCACATAGTGTTCCAGCGCAAATCTGGAGAACGGGCGTCAACTGG Gene GeneID:532104|LOC532104:XM_002684715:55_cdna Constitutive 0 NULL GeneID:532104 1 GENE LOC532104 NULL similar to PH domain and leucine rich repeat protein phosphatase EMBV3_04854 TTTGGTGCTCTTCTTCTATCCTTTGGATTTAATGGTGGTTTGGGCCATATGAACATCGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14281 CCACTTTCAGTTAAGGGTCTGGGTCTGTGTTTTCCTTGAGAGTTGGGTAAAGGGAAAGGC Gene BVV0102_194210 + 0 NULL GK000009.2:40591233-40704335 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01725 GCTCCCTATTTTCTCACCATCAGATCACCTTAGAGGGTAGGGCTATATGGTTCCAGGCAC Gene GeneID:100125307|FAM119B:NM_001103340:853_cdna UTR3_Alt 1 NULL GeneID:100125307 5 GENE FAM119B MGC151800 family with sequence similarity 119, member B EMBV3_03993 CTGCACTGACTGATGTATTTCACTATCGAGTGAGCATGTGCATTGCTGCGGGAATAGGGG Gene GeneID:526999|NOX3:XM_002690353:10_cdna Constitutive 0 NULL GeneID:526999 9 GENE NOX3 NULL NADPH oxidase 3 EMBV3_29533 GGTGGTTCAACTATCAGGTTGGGAGGCCCCAGAATGTAACCAAACAGAAATGTGGATTGC Gene BVT0102_134904 + 0 NULL GK000010.2:40758746-41943340 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013632 TCONS_00013633 TCONS_00013638 TCONS_00013637 TCONS_00013642 TCONS_00013639 TCONS_00013636 TCONS_00013641 TCONS_00013635 TCONS_00013634 TCONS_00013640 1 XLOC_008165 NonCoding TCONS_00013641 XLOC_008165 NonCoding NonCoding - 10:41261588-41271572 - TSS10071 5000 3 TCONS_00013641_3 85 0.2914 3 0.499449063407793 0.00272900562578004 0.00174244890767288 0.00173784342190894 0.000652329481563818 0.00114172830235155 0.000447276348779714 0.000504069591828657 0.000388148893455269 0.000755701441691844 1.27080891544362e-294 7.6230512733666e-38 2.68395163736206e-44 2.13306728603149e-05 2.89144026980621e-05 2.29067950645538e-06 0 0 0 0.000995954933145854 0.00117128076715242 0.000773619040890388 7.42067282566711e-06 9.33792478205218e-275 7.43130343557183e-101 0.00192359662220692 0.00180685318283764 0.0010604158506399 2.27166264586957e-25 4.99667769199756e-257 4.49456855815416e-06 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 2e-125 455 83.83 0.083 0 noncoding 0 1 1 1 0.010555509177422 0.923041272950192 0.0716782499494655 0.306955840649436 TTGACCTCCTAGCCAATCAAGCCCAGTTTCGCTGTTGCCTCTTCTAAGTTCTGTTAAACTCAGTCTTGCCCCAGATCCCATAGGAACAGCATTTCCACTGCTTGTTCATCATTTGAAAAACCCTAGCCATAGAGAGATGGCAATCCACATTTCTGTTTGGTTACATTCTGGGGCCTCCCAACCTGATAGTTGAACCACCAGCGTGTCAGAGAATCAACAACCTATATGCTGCAGACAGACTGAAAAGCAAGTCAAGTTCTCGGGACACAAAACAGGACAAACAAGAAGACAACAGCTGGCACTTGAAGAGAAAAGGATAGAAAACCATTAAGAAACAATGTGAAATTTTACCTTCCCTTCTTGACTGGGCACTAGAGAGATCCAGAAGAGTTGACATTGTATTCATGCATGGATGTGAGATTTGGACTATAAAGAAAGCTGAGTGCCAAAGAATTGATGCTCTTGAACTGTGGTGTTGAAGAAGATTCTTGAGAGTCCCTTGGACAGCAAGAAATTTCAACCAGCCCATCCTAAAGGAAATCAGTCTGAATATTCTTTGGAAGGACTGATGTTGAAGCTGAATCTCCAATACTTTGGTGTGAAGACCTGAGTCATTTGAAAAGACCCTGATGTTGAGAAAGGTTGAAGGCTGGAAGAAAATGGGATGACAGAGGATGAGATGGGATGGATGGCATCACTGACAGGATGGACATGAGTCTGAGTAAACTTAGCAAGTTGGTGATGGACATGGAAGCCTGGCGTGCTGCAGTCCATGGGGTCGCAAACAGCTGGACATGACTGAATGAACTGAACTAGCATTGATGACTATTAGTTTTTGTTTATCTGAGAAGTTCTTTGTCTCTCCTTCAATTTTTAATAATAATCTTGCTGAGTGGAATGTCTTAGATTGTAGGATTTTCCTTTTCATAATGTTTTTTCCTTTAATAATTTTATATATATCATGCCTCTCCCTTCTGGTCTGCAAGTTTTTGTAGAAAAATCATCCGATAGCCTTATTTGGGTTTGCTTGTATGTGGCCCTTTGTTGTTTTCCTGCTGCCTTAAGAATTCTCTCTTTATCTTTAACTTTTGGTATTTTAGCTATTATATGTCTTGGCATGGGTCTCTTTGTATTCATTTTGTTTGGGACTCTCTTTGATTCCTTTACCTGTATATATATTTCCTTCCTCAGGTTCAGAAAGTTTTCAACCAGAATTTAATCAAATATATTTTTAACCCTTACATTTCTCTTTTCACTTTCTGGTTCTCCTAAAATGTGAATGTTGTTATGCTTGATGTTTGTTGTCTTTGAGGCTTGTTAAATTGTTCTCATTTTTCAAATTTGTTTTTGTTTCTCTGATTGGGAGATTTTTGGAACTCTGTCTACCAGGTCAATGTGTGTTATTTTGTATCACCTAGCCTGCTGTTAATTCCTTCTAGTCTATATTTCATTTCCGTTATTCTGTTCTTCAGTTCTGATTGTTTTTTTTTTTAATTTTCTAATTTCTTGTTAAAATTCTCAGCATGTTCATCTATTCCTTACCTCAGTTTAGTTAACATTCTTTTAACTAATGCATTGAACTGTTAATCTAGCCAATTATTTATCTCTTTCATTAGTTTTTTTTCCCAAGTTATTTTTTCTTTCACTTGAAACTAATTCAGCTGTCTCTGTGAAATCAGGTGAAACAGTTAACCTATCCCAGTATTGACATGGTGTCCTTATGTGGGAGCCTCCCTATGGAGTCTGCATATGCCCAGCAGTTTTGGTGGGAGAATTGATCTGATGTAAGTACAAATCATGTCTCTCCCCAGAATGTGCTGACAGCTATGGGTAGGAGAAGGAGAGCCAGGGTGTTGTGAGCCAGGGTTCTCCTGTGATCAGTGGCTCACACCACCCTACTGGGGGCAAGTCACGTCCCATGTTGCAGGAGCAGAAGCCCTAAGGTTCAGGTCCACCTTGGTTCTTTTCCTGTGTATGTGCTATCCCTGCTCCCAGCATTGGCACCTTATCCCTAGACGGGAGCAGTGCTGGAGAAAGAGGGGCTGAAGTGTGTGCCTGGTGTGGATCAGGGCACATGTTGAGGTGGTTCCTGCACTAGTCTAGGCTTTTCATAGTGCTTGTCATGACCCCATTCAGATGATGTGCTGGATCAGAGCTGGCTCTGTCTCTTTCAACTGCTCCCTCTCCTTGGCCATGTCAGCCATCACTCTAGTGTGGGGCTGCTCTGTAGAGCAAGCGAGCCTGGAAAGACGGCTTGGCTGGAATGTGTGCTAGGATAGTCACAGAAAACTGGCCAAGTTCACTGGCATTTCAATCTATTTCTTCTGCCTTGTTGCAGGAGTAAGCAAGTAAGTGCATGTTCCTCATGAGAGGAATCTACACATCTTATAGCCCTGCTGTCAGTCCCATTGGTTTTCAAATCAAGTAAGGTGACTTGCCCTCCCAGGATCAGACCCGAGGGCTGGACTACTCAACATGTAGTTTTAACTACTCACTCCCCAGGGAGGATCTCCACCTGTATAATCACCTACCTCTTCCTTTTCCCCTCCTAGGAGCACAGGTCCTGACCTGATCACGTCTCTTCCTTTCCTACCTGACTCTGTGATGGCAAATTTCCTTGGCAACTGCCAATTCATAATTGATACTGCCTCCATTTAGTTTCCATTTAGTTTTCAGGATGTACATGTATTTTTGATGTGTTCATGGAGGGAGATGAGATCAGAGTCCTACTCTACCATCTCAATCTCCTCCTCTCTGGATTGTATTTTATATAAATTACAATATCAAAGATGTTTCTTGTGTTGAAAATGAAACTCTAGTTATGTAGGTGTTGTTCTTGATTTTATAAGGAAGATAACAATATTTAGAAATGAGTACCATCATGTCAGTGATTTACTTTTAAATACTTAGTGAAAGAGAAAGAGAAGACAAATGTGCCAAAAATTAACAATTGGTGAATCTGGTGGCTCAGAGGTTAAAGCGTCTGCCTGCAATACGGGAGACCTGGGTTCGATCCCTGGGATGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCAGTATTCTTGCCTGGAGAATCCCATGGATGGAGGAGCCCATGGAGGGCTACAGTCCACAGGGTCGCAGAGTTGGACACGACTGAGCAACTTCACTTTCACTTTTCACTTTTCACTTTCACTTTCACTAAGGAGTAAGTGTGTGTCATTAAAATAAGAGTTTTGATACAACTTTTCTGTAGGCTTGACATTTTTCAAATTAAAAAAAAAAAGGCAAATATAAACATTCCTAGGAGTTGCCTTATCTTTTATGAGGGCTGTAATACAAGTAAAGACATTTATTGTAATTAAAAAGGTTCACAAGACATTTTAAGTCTTTTTTTCACATCATGAAATAAGAATCGTCTCTTAAAAATGTAATATCCCCTCTCTTCATAATGGCCTTTACACTTTACCTTTCCCTGACTCATCCTGATATGAAAACATTATGACTTCATGCATAATTCCATTTAACTTTTAAGCTAAATTTAGGAGTCATTGCCACTATTTTTCTAGTGTTATGAAACATACACAGTTATTTGATAACAAATTGATGTTTTCATAGTAGTTTTGATAATATAAGCCTGAAATTAGATTTTAGCAGAGAATGAAGGGTGATAGTTCCCAATCTATATTCAGAATAGCACACTATTTCTTGGAGTAACAGAAAGTAGAAAATGACAGAAAGAAATGGCTGAAACTTTGAACCATGACAGCCTTGAAAATGGCAAAATGCAGTTAAAGGTATAAGGAAAATGTTGAAATGTACAAGAAGTCATTACTTGTATTATTTTGAAGGCAGAAAGAACATGGAAAAGTTTACACTTGGGGAACAGAAAAACTCTTTAACACTATCCTTTTACTTACAATTAAGACTATATAAGACATTTTGCTTATAATTGAGAGAATTTTTTTCCACATTGTGAAAATCCCTGATAGGATTCTGAAGTTTTATATGTTCACTTATTTGAACTATTAACATGCTGAAATATCCTTTCCTACAAACCCGAAACTGCAATTTTTTCTTCTTTTTGTAGTGACATAATTCTTTAAAATGTTGTCTCTTTCAGAAAGTATGTAATGCACATAATTTGTAGAAAGTACTCATTATATCACAGAACTGTAGTCAAAGTTTAACAATTAAATACTGATTGGCACAAAAGGTTGGATGCTAAACTGATGCTTACTTCTGTTTAATCTTTTGATCGCAGCTGCATTTTGCTATATTAAGCTTTCAAATTGAATGGCCATAAATAATAAGATACTTAACTGTATTGCAAAATTTTTGTTAATCTACTTAGACTACATGTAAGCTCATTTAGCACCTGCTAGAGTGCTTTAAAATTTCTGGGTCACAGTCCAATAGCATCGACTTTGTCCCTAAGACTAGCATTAATTTTAATAAAGTAGAATAGAATAGGACAGACCAGAATAATTCTACATGCATAACAAGTAGTAGGCATAAATGTTGTTTAGCAAATGAGGTTGTGTATATATATCTGTGCAGTATTGGAATATAAAATGTCTTGTTGCAGCTTAAAAAGTTGAAGACAATGACTCTTGCTTGCATTTTCATAGGGTTAAATAGAGGCTGTCACTTTTATAAATTGTTAAACATAATCTTAGGTTGGTGCAGAAATTATTGTGGTTTTTGCATTGTTAAACTTTTCCATTTAATATTGGAATACATTCTAAATAAATTTGATTATACTACACATCATTTTAATGTACATTTCTCACTTTATTTTTTTTTCTAATGACTTATTACTTGCTGTTTATTTTAAGAGTGTTATAATGATTTAAAATTCAAAGTCCAAAACTGTAATTATGTTTGTACTAACCTAATAGCAAATTTTGGTGAAAAATTTTTCCATGCATAGCAAGACTTCTAATTCTAAAAATAAACATTATTTTTATAGATTTTGTTTTTTCTCATGAGGAAAATGCATGCTTACTGTAAAGT TCONS_00016933 TCONS_00016934 r 5' 438121 TCONS_00016933 TCONS_00016934 r 5' 438121 EMBV3_30793 AGTTCTTGACCAATGACTCACCAGCCGATAAGAACCTCTAGCCCGTGAGAATGTGTGGCA Gene GeneID:523311|GPX7:NM_001101113:67_cdna Constitutive 0 NULL GeneID:523311 3 GENE GPX7 NULL glutathione peroxidase 7 EMBV3_14455 CGGCTATCGATGGATCTGCAACCCGCGCGGACCCAAAGCTTGTGGAAGAAGGCCCAGCTC Variant GeneID:787270|THEM4:NM_001080368:178_cdna 113^299 2 EMBV3_11072 GeneID:787270 3 GENE THEM4 MGC152209 thioesterase superfamily member 4 EMBV3_28365 GGGCAGATGAAGGTAGTCGGCTAAGCAGGTTCAGAATGCTCTTTACTTCCTTTGTGGAGC Gene GeneID:520056|NETO2:XM_002694872:854_cdna UTR3_Alt 2 NULL GeneID:520056 18 GENE NETO2 NULL neuropilin (NRP) and tolloid (TLL)-like 2 EMBV3_25851 CTCATCGTTTCGACTTTTTTAGGGAATTGCGAGGGGGGATAAATGGTGTAAGCCTTGGGC Gene GeneID:338062|FCGRT:NM_176657:89_cdna Constitutive 1 NULL GeneID:338062 18 GENE FCGRT NULL Fc fragment of IgG, receptor, transporter, alpha EMBV3_07868 CATCGCCGTCTGAGGGGATTTTGTGAAGACTTTACTCTGTGGTTTTGGCAGTGACTATGG Gene BVT0102_180364 + 0 NULL GK000009.2:50103402-50159482 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237339 TCONS_00237338 1 XLOC_144688 NonCoding TCONS_00237338 XLOC_144688 NonCoding NonCoding - 9:50137304-50138864 - TSS177452 899 3 TCONS_00237338_3 69 2 0.424631173829378 0.000204710030667217 0.00189089227025204 1.26964871163398e-09 9.43834312563945e-05 2.43356068709275e-10 2.38729358161102e-05 3.66661464308241e-12 0.000347854821826369 0.000140423754616404 0 0 0 3.19129004874762e-06 1.0464152529081e-05 0 0 0 0 0.000359941068665413 8.23146987663087e-10 1.01298626078287e-05 0 0 0 2.69174915321627e-10 6.67041954235343e-11 0.000443182802437438 0 0 0 0 noncoding 0 0 0 0 -0.29484677588589 0.0648899685702792 0.0539091401977682 0.477723515880704 CAGAGCCTGTGGACCCTCTGCTGCTCTAAGGAAGCCCCTTTGGGTGCCTGAGGTGCTGGCTGCTGTCGATGTGGATGAGAGTGAAGGGCCCATGTCCATGGCAGGAGCAGAATTGGCCCTGGAAAATGCTCAGGCAGAGCAGCAGCCATGGAGCAGGCCCTGCTGTCCTGGACTTTCTCCCTTGTCTTTCCCTGGCTCTCACCCACCGCATTTCAGGACTGGGAAAGGCATCGTAAAGACTGCCCTGATCGATTCCTGGATTTAAAAGGATGGCCTGTGGAAGCTGTGATAATCACAAGAGGAGAGCGAGACCCTGCCCCAAGTAAACTCTTTCCTTTTTTGTTTTTCATGTTTTGATCTTATGAGCCTTGACTAGGCTCCACTGAAAACAATGGCAACTTCTTCAAAGAGGAGCATCAAGCCCTCTGAATGGGCTAATTCTGCTGCAGGTTCCCGCTATCCATCCGCCCTTGACAAGCGCCAGTAGAAGTCAACAGGTGGTTGTCCAAATATAAATGAAAAGGCTTAACTCTGAAAACATCGCCGTCTGAGGGGATTTTGTGAAGACTTTACTCTGTGGTTTTGGCAGTGACTATGGGTTTCTTTGCCAGCGCACAGAGAAATTTGACCTGTGTCCCTCAGGGGCTAGAGATTTTCATCATGACTGTCTCCACATAGCACCTACCCACCCCTTCTTTTCCTCAACAAGCTAGTAAATTCAAAAATAAAAAGTGAAGAGAGAGAGAGAGAAAGGCTGAAGAAACAAAGGAGAGGGAGTACCTGAGTCTGTATTTTATTCCCTTATTAAAACCACATTTACATGTGTCAAAAACAGGGGTATTTTGATGTGTGGGAGGAGAGATATTTTGCAAGGAGATTTCTCTCAATAAAATGTCCTC TCONS_00235482 r 5' 21435 TCONS_00235482 r 5' 20670 EMBV3_03531 TTTGCGAAACGCGCCTAAAATATGGAGGAGGAATTGAGGGAGAGAGCTAGGGAACAGCAC Gene BVT0102_207717 + 1 EMBV3_27031 GK000004.2:38018532-38339063 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00533 TGCCTTGACGCTGTCTCCCTGGATAACACCATCTATGTGGTTGGCGGCCTTATGAGCAAA Gene GeneID:539879|KLHL35:XM_002693461:40_cdna Constitutive 0 NULL GeneID:539879 15 GENE KLHL35 NULL kelch-like 35 (Drosophila) EMBV3_11178 GTCCCCTTCACAGCCCTTGTCATGGCCCAGCGCCCTGCTATATTTGTAACCTTGCAAAAT Gene GeneID:532773|PLEKHA6:NM_001075973:76_cdna UTR3_Alt 2 NULL GeneID:532773 16 GENE PLEKHA6 NULL pleckstrin homology domain containing, family A member 6 EMBV3_30017 GTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGT Gene BVV0102_388470 + 0 NULL GK000006.2:25894865-26043473 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00117923 TCONS_00118040 TCONS_00210913 TCONS_00226167 TCONS_00219592 TCONS_00040258 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00174808 TCONS_00174809 TCONS_00132066 TCONS_00174807 TCONS_00232829 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00078426 TCONS_00207934 TCONS_00174805 TCONS_00171428 TCONS_00080712 TCONS_00206300 TCONS_00175564 TCONS_00207933 TCONS_00242416 TCONS_00205125 TCONS_00174806 TCONS_00056149 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00242415 TCONS_00001866 TCONS_00110426 TCONS_00206299 TCONS_00246741 TCONS_00001865 32 XLOC_105290 XLOC_072089 XLOC_072206 XLOC_129423 XLOC_137940 XLOC_132911 XLOC_024074 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_126448 XLOC_103815 XLOC_049596 XLOC_124877 XLOC_105345 XLOC_149080 XLOC_124587 XLOC_033952 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_149079 XLOC_066330 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_12634 CTTAGTCTGGTTTTCATTTTCTCGTCTTACATCCCTTTTGACTGTGACCCCGAGCACTGC Gene GeneID:522380|TCHP:NM_001164026:204_cdna UTR3_Alt 3 NULL GeneID:522380 17 GENE TCHP NULL trichoplein, keratin filament binding EMBV3_10337 AGGCCTGTGGGGACATCAGAACCCAAATCAGCAAATCTGTGTGGGAATCGAACATATGGC Gene GeneID:617724|C14H8orf46:NM_001076475:34_cdna UTR3_Alt 2 NULL GeneID:617724 14 GENE C14H8orf46 C8orf46 MGC139854 chromosome 8 open reading frame 46 ortholog EMBV3_29984 TTCTTCCTTCTTTCCTTGCCCGCCGTGTTTGGGGCCCAGTTTTAGATTTTACCGGTGAAG Gene BVT0102_387280 + 0 NULL GK000001.2:54516505-54649512 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35734 CCCTATGGAAGTAGTGTTTTCTTGGTTCATTTTCACCAGATCTGTGAATCTACGTGAAGA Gene BVT0102_052523 + 0 NULL GK000010.2:7965804-7992985 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20662 CCAGATGGTCCCCGAGGGTATCGGATGATTACAGAAGGTGGAGTCAGTATAAATCACAGA Gene GeneID:536956|YARS2:NM_001098088:11_cdna UTR3_Alt 2 NULL GeneID:536956 5 GENE YARS2 NULL tyrosyl-tRNA synthetase 2, mitochondrial EMBV3_27442 CCAGGACAGTCATCAGGGGCTCTCAGGCTGACCAATTCCTGCCCTCTGTGCCGCCATGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14531 GCTGGCTGTGACCTCGATGTCCAGGATGATGCTGGAGACACGGCACTTCATATTGCTGCT Variant GeneID:516065|ANKRD6:XM_002690181:55_cdna 592^987 3 EMBV3_00379 GeneID:516065 9 GENE ANKRD6 MGC137780 ankyrin repeat domain 6 EMBV3_42843 TTGAGGGGGTTCTGCTCAAGAGTTTTATCTCACAAAACTGTATCTCTAATAAGAGAAATC Gene GeneID:617720|NUDT12:NM_001046608:14_cdna Constitutive 2 NULL GeneID:617720 7 GENE NUDT12 MGC137455 nudix (nucleoside diphosphate linked moiety X)-type motif 12 EMBV3_36460 TGAAGGCTGGAAATCCGGGGATCGATTATTTGTGGACTTGCTTCCCTTTGGTAACGGTGG Gene GeneID:100295817|DOCK8:XM_002689619:24_cdna Constitutive 0 NULL GeneID:100295817 8 GENE DOCK8 NULL dedicator of cytokinesis 8 EMBV3_06599 TTTGTTAAGCGTGTCTGTATTTATGTGTGAGGAGCTGCTGGCTTGCAGTGCGTGTGCACG Gene GeneID:282152|BCL2L1:NM_001077486:745_cdna Constitutive 2 NULL GeneID:282152 13 GENE BCL2L1 BCLX Bcl-xL BCL2-like 1 EMBV3_33389 GAAAGGTCAGTGCTCACATTAAAGACGTGAAGGCCCGGGTGGAGAAGCAACAAACTCACG Gene GeneID:528386|MURC:NM_001103264:2_cdna UTR3_Alt 2 NULL GeneID:528386 8 GENE MURC MGC160021 muscle-related coiled-coil protein EMBV3_04828 TCTCTTACAGATGGGAGATAGCACAAATGGACCGCAGGTTACACACAGGTGGGATTCTTG Gene GeneID:615263|LOC615263:NM_001103298:278_cdna Constitutive 0 NULL GeneID:615263 2 GENE LOC615263 MGC148933 hypothetical protein LOC615263 EMBV3_39000 ACAGTCGTCCACTACTTGCGTGACTGTATTGGCCTGTCTGCCATCGGCTATGCCGCTGCC Variant GeneID:534894|PQBP1:NM_001046389:96_cdna 109^524 3 EMBV3_17260 GeneID:534894 X GENE PQBP1 MGC129091 polyglutamine binding protein 1 EMBV3_38853 AGCCATGGAGGACGAAATGCCTAAGACTCTACAGCCGGAAATGATCCATATTGTTTTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22600 GTGGGTTTGAACGGATGTTCTCCACAGAAGATACACACTTGAGCAGTCAGCAGATGAGGG Gene BVV0101_031639 + 0 NULL GK000021.2:71404531-71417020 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125752 1 XLOC_077294 NonCoding TCONS_00125752 XLOC_077294 NonCoding NonCoding - 21:71404145-71408645 - TSS94511 4500 1 TCONS_00125752_5 111 0.644666666666667 1 0 0 0 2.05644538307793e-06 0 2.19429879000007e-06 0 0 1.31438172735149e-06 8.76681026792327e-06 9.60048146255229e-06 2.59440865631186e-05 1.58919312192842e-06 6.37617622471201e-07 8.36265927160258e-06 1.19929601292578e-05 0.00134405911189454 0.000332046172228442 0.000250909256776053 1.59353994335182e-05 0 3.37303254634743e-06 0.00014593974633377 0.000224255592205437 0.000353921418719771 3.07932189452507e-06 0 0 0.000128069329044843 1.18668228183431e-05 4.27537797790954e-05 NM_177497.2 FDPS Bos taurus farnesyl diphosphate synthase (FDPS), mRNA. 0.0 749 96.51 0.100666666666667 NM_001242825.1 FDPS Homo sapiens farnesyl diphosphate synthase (FDPS), transcript 7e-144 517 85.75 0.100222222222222 0 noncoding ATGCCCATGCCAAGAAGATCGTGCTGGAGATGGGAGAGTTCTTTCAGATTCAGGATGATTACCTCGATCTCTTTGGGGACCCCAGTGTGACGGGTAAGATCGGCACAGACATCAGGACAAGTGCAGCTGGCTGGTGGTTCAGTGTCTGCAGCGGGCCTCTCCAGAACAGCGCCAAATCCTGCAGGAGAACTACGGGCAGAAGGAGGCTGAGAAGGTGGCCCGAGTGAAGGCGCTCTACGAGGAGATGAATCTGTCGGCTGTGTACATGCAATACGAGGAAGACAGTTACAACCACATTATGGGTCTCATCGAGCAGTAGGCTGCGCCCCTGCCCCCAGCCATCTTCCTGGGGTTAGCACAAAAGATCTACAAGCGGAAAAAGTGACCTAGAGTCTGTGAAGGTGGGGAAGGGAGGCTTCTCAATAAATTATTGTCTAACCTGTGAAAAAAAAAATTGAAATATAGTAGATTTATAATACTGTGTTAGTTTTGGGTATATAGCAAAATGATTCAATTATATATATATTTCAGATTCTTCTCCATTACAGGCGATGACAAGATATTGAATGTATTTCCCTGTGTTATACCGTAGATCTTGGTTGCCTATCTGTTTCACATTTAGTAGACTGTATCTTTAATACCATGGAAGTCAAAGTGTCCGTCGCTCAGTTGTGTCTGACTCTGTGACCCCAGGCTCCTCTGTCCTTGGACTTCTCCAGGCAAGAACCCTGGAGAGGGTTGCCATTCCCTCCTCCAGGGGATCTCAATCCCGTATTCCTGACTGATTCTTCCCTACCCCTTTTCCCTTCTGTGACCATAAGGTTTTTTTCCTCCTATGCCTGTGAGTCTGTTTCTTCTTTTTTTAAAATTAATTGGTTGATGACTTTTGGCTGCACTGGGCCTTCGCTGCTGTGTTCAGCCGTCCTCTAGCTGTGGCCTGGGCTGGTCTTTTCTGTGGTGCTCCGGCTTCTCACTGCAGCGGCTTTTCTCCTGCAGCACAGGCTCTAGGCTCACGGGCTTCAGGAGTTGTGGCTTACAGGCTTAGCTGCTCGGCACATGTGGAATCCTCGCAGACCAGGGATCGAAGCCCTGTCCCTTGCACTGGCAGTCAGACTCCCAACCACTCGACCACCAGGGAAGTCCTGAGTCTGTTTCGGTTCTGTAAATAAATTCATCTGTATCATTTTTTAGTTCCCACTCGTGAATGATATACAATATTAATATTTCTCTTTGTGACTTACTTCCCCTAGTAGTATGATGTCTGGATCCACCTATGTTGCGAAAAGTGGCATTATTTCATTCTTTTTTATGCCATCCTAACCATTTATTTATTTTTAAATTTTATTTCAAATATTAATCAGATTGAACGCCGCCACCTGAATTAACCGATCCACATGGATTTTTGCCTGATGTTTGCTGACTTTCAAAAATTGCTTTGCAGGAGTTCTTTGAAAATTCAAGATATGAACACATCATTGGTTTCACACATTATAGATATCTTCTCCATTCTGTCCCCCTCGTAGCTCAGTTGATAAAGAATCTGCCTACAATGCAGCAGGTTCCAGTTCGACCCCTGGGTTGGGAAGATCCCCCGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTGTTTGGACAGGGTCGCAAAGAGTCGGACATGACTGAGTGACTTTCACTTTCTCTTTCCATTCTGTCGTTGGCTAAAGATTTGCTCATGGTTTCCCTTTGTTGAATAGAAAATTTAAATTTTGTTTTAATTGAATTATGGTTTTGCCTCTTGCTTTTTACAGTTAGCATTTGAAGATGTGTTTCTGTCTTGTGTCATGTTCTCCGCATTTCCTTCTTCAGTTTTTGCTTCATTCCATCCAGAGTCTGCCTCTGTGTGGAATCAGGCAGGAATCCAGATCTCTTCCATGCAGTGAGCCAGTTTCCAACACTGTCTACACACAAGCATGCCCTGGCCTCCTGGCTCTGTGCTGTCAGCTTCTCCACGCTCAGTCCCCTTCTCTCCCACCGGGCAGTTCACGCACCAGCAGCACCCTGCTCTCAGCCCCTGCATTTCGTCAGGGTTCGCCCTTAGGAGCAGAGCCAGTAGAGGTTCTAAATGAAGAGACGTGCTGTCTGCGGTTGCTGGTGTAGAAAGAGCCTGTGGTGGCGGTAGCTTCGTTTTGGCCGTCTTGCTGACGCTTACCAGTCAGCATGGTGGTGCTGTTCTTAGTCTTCAAGGGCACACGCCTCAGGTTTCCCCGTGAAGTACAGCACCATCTGTGCTCTACGTAACTTTGTACAACTTTTAGAAAGTTTCCTTCCACTCTTATTTTCCTAAGAGCCTTTTTAGAATCATAACTACCAAATAGTTTATCTTCATTAATTAAGACAGTCATATGATTTTCTCCTTTACTTTATCATAATGAATTGCATTAACACATCAGCACCCCTTCCGAAGTCAAGCCACCCTTGCATTCCTGTGAGAAGTCCTGTTTGATCACAATGCTGTAACATTTAAATATTCAGTTGGTTTTGATTAGGTATAATTTTATTTAGAACATTTATATTGATACTCGAGGGGAAATAGGCCTATGACTTTCTTCTCCGTTTTTCTTTGTATTTCCCTTTTTCTGTTATGACTTTCTTTCTTCTCCGTTTTTCTTTGTATTTCCCTTTTTCTGTTATGACTTTCTTTCTTCTCCGTTTTTCTTTGTATTTCCCTTTTTCTGTTATGGAATCAAGGTTACATTGGCCTCATCATAGCCTCTGCCATCTATTTTTTGGAATAACTTATTAAGATAGGAATTAATTAGGCCTTGAAACTTTTTTCTTGGTCACACTGGGTAGTACTCAGGCTGTTTGTTCCTTGGCCAGGGATTGAACCTGTGCCCCTGCACTGGGAGTGTGGAGCCTTGTTTTTTTAAGCTTTATTTATCTGGCTGCACTGGATCTTCATCGCTGTGCGTGAGCGTTCTCTAGCTGTGGCACGCAGGAGTGACTGGCGGTGTGCGGGCGTCTCATCGCGTGCTGGGCTTCTCTGTTGTGGAGCGTGGGCTCTGGGCACATGGGCTTGGTCGTTGTGGCGATCGGGCTGAGTTGCCCTGTGGCATGTGGGACCTTCCCAGACCAGGGATCAAACCCTAACCCCTGCATTGGCGGCTGGATCCTTAACCACTAGGCCACCAGGGAAGGCATGGGAATGTGGAGTGTTAACTCCTGGACCAGGGAAGTCCTGAACTTGACTTTTGCAGAGTAAAGGCTTTTGATTTTGATGAGGTCCCGTTTATCACTTTATCTCTTGTGGGCTGTGCCTTTGGTGTCACGGCTTTTTTTTTTTTTTTGACCAGTCCCAGGTCATGAAGATTTCCTTTTATGTTTCCTTCTGCAAATTTATAGTTTTTACATTTAGACATACTAACCACTTGGTGTTAATTTTTGTGTTAGATATTAGGTTAGCTTAAGGATTTTTTTTTTTTTTTTGGCATATGAATGTCCAGTTAGTGAAAATTCTATCCCTTCTCTGTTGAATCACCTTCACACCTTAGTTAGAGATTATTGGTTGCACTCAACAAAGCAGGAGTGGGAAGCAGCTTCCTCAGGCTGATGGAAGGAACCTGCCGCTTTCAAGAGACTTGTATCCAAAACATAAAAAGAATTCCTTCTTGCAACTCAACAGTAAGAGGACCATAGCACAATGGGAAAATGGGTAGTGGGTTTGAACAGATGTTCTCCACAGAAGATACACACTTGAGCAGTCAGCAGATGAGGGGATGCCCAGCGTCATGAGCCCCAGTGGGAAAGGCAACTCCAGCTGCGAGGAAGTAGATGCCCCTTCACCCCCGGGGGGCTGTGGTCAGAAATACTGACACGTAACAGTCACTGGGGAGAATGTGAAGAAATCGGGGCCCTGATATGCTGCTGGTGAGAACGTACAACAGTCTGAAAACCAGCAGTTCCTCAGATTGTTAAACGTGGAGTTACCTCATGACCCAGCAATTCCACTCCTGGGCATACACTCAAGAGAAATGAAGACACATGTCCACAGAAAGTCTTGTTCAGAAAAAAAATCTTGTACAAAGTGTCCATCGAAGCATTATTTATAGCCAAAAAGTGGGAACAACATAAATGTCCAACTGATAAATAAATCTGGAGTAAATGATGGAAGGTTACTTGGCAATAAAGAAGAATAAAGTAATGACAGATGCATTTGCTTCCTGAAATAAGTCACAGAAGACCGCATTGTATGAAAAAAAAAAGACCGCATTGTTTGATTCTATTAGCAGGAAGTGTCCAGAATAGGCAAAGAACAGATTAGTGGTTGCCTAGAGTTCGGGAAATTGGGGAAGAATTGGGGAGTGATTGCTAATAAGTCTGAGGCTTCTTTTTGGGGGTGATGAAAATGTTCTATGATCGTGACATGTGTCGATATACTAAAAGACTTTGAATTGTAAACTTCAAATGTGTAAATTGCACAGTATGTGAATTATAATAAG TCONS_00120317 . 3' 4915 TCONS_00120317 . 3' 9414 EMBV3_42611 GTGCTGAACTGACACTAACAGCCAAGAAGACTGCCTCTTAACTCAAATGATGGTTTCCCG Gene GeneID:540328|FBXO25:NM_001076211:69_cdna UTR3_Alt 3 NULL GeneID:540328 1 GENE FBXO25 MGC137945 F-box protein 25 EMBV3_43206 GTCAGAACTCTTCGATGAAAGATCAGCCCTCAATGTGTCTGGGTTTTTACCTGAAAGGAG Gene GeneID:497202|GPAM:NM_001012282:18_cdna UTR3_Alt 2 NULL GeneID:497202 26 GENE GPAM NULL glycerol-3-phosphate acyltransferase, mitochondrial EMBV3_13920 TCCTTTTCAGGAAGCCTGTGCTTCCAGCAGGGGATGAAAAAGCACTCGCTGGTAATTAAA Gene GeneID:514967|KCTD20:NM_001101093:32_cdna Constitutive 2 NULL GeneID:514967 23 GENE KCTD20 NULL potassium channel tetramerisation domain containing 20 EMBV3_18101 GTCAAACCTAACCGCTCTAGTCCACATGCCTCATACCAAACTCAGGACACCAGAGCTACT Gene BVT0102_004905 - 1 EMBV3_05510 GK000007.2:16595368-16617733 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212082 1 XLOC_130077 Coding TCONS_00212082 XLOC_130077 Coding Coding C7H19orf52 7:16593453-16596822 = TSS159226 3294 1 TCONS_00212082_2 260 0.267152398299939 2 0.0225653206650831 0.000100356518274064 6.72547179546136e-06 4.95289774442658e-05 1.10799162834607e-05 1.31960871229949e-05 2.16773178007933e-11 0.000598258710140684 0.000182365163357131 7.87464153741218e-05 5.49934375458045e-06 3.50380333417175e-05 2.38966227497938e-05 4.60306091107716e-05 1.5899864595454e-05 2.04753085981912e-05 0.000192238531653641 1.09354471222536e-05 4.00020833749294e-10 0.000157957129194222 2.13658631494049e-05 9.78218199523019e-05 5.10128060095505e-06 2.41029216481228e-05 8.10286653129226e-05 4.14858740130682e-05 3.33413390024097e-05 9.78766008998764e-05 1.92771690744495e-05 3.51548622154957e-06 8.02861770958111e-06 NM_001099699.1 C7H19orf52 Bos taurus chromosome 7 open reading frame, human C19orf52 (C7H19orf52), mRNA. 0.0 2578 99.25 0.443230115361263 NM_138358.2 C19orf52 Homo sapiens chromosome 19 open reading frame 52 (C19orf52), mRNA. 0.0 942 79.02 0.337887067395264 TCONS_00212082_2 sp|Q9BSF4|CS052_HUMAN CS052_HUMAN Uncharacterized protein C19orf52; 1e-158 446 85.77 0.996153846153846 1 coding 0 0 0 0 -0.0428387246160104 0.784541311030922 0.0257161910820919 0.673179713259908 CTTCGGAGTGCGGACGCCCAGCCGGAAGACAATGGCGGCTGCCGCTCTGAAGAGATTTTGGTCCCGAAGCCGTAGAGAGGCGCGTGACGCTGCAGCCGCAAAGCCCGGCGTGTGGGCGCGGTTGGGCGCTTGGGCCCGCTCGCTGCTCCAAGATTACGCAGAGGCCTGCAAGGACGCGGCGGCGGCGGCGCGGGCCCGGCCCGGGAAGGCGGCCGTGTACTTAGGGCTGCTGGGTGGCGCGGCGGCCTGTTGCTCCCTGGCACCGAGCGAGGCAGCCTTCGAGGAGGCGCTGCTCGACGCGTCGGGGACCCTTCTGCTGCTGGCGCCCGCCACTCGCAACCGCGACTCGGAGGCGTTCGTGCAGCGGCTGCTTTGGCTGCGTGGTCGCGGCTGTCTGCGCCACGTGAGCCTGGGCCTCTTCTCGCTGGTGTACGAGGCGCCCTTCGATGCCCAGGCCAGCCTCTACCAGGCTCGCTGTCGGTACCTGCAGCCCCGCTGGACCGACTTCCCGGACCGGATTCTGGATGTGGGCTTCGTGGGCCGCTGGTGGGTGCTGGGGGCCCGGATGCGCGACTCCGACATCAACGACGACGAGTTCCTGCACCTGCCGGCTCACCTGCGCGTCGTCGGGCCCCACCAGCTGCACTCGGAGGCCAATGAGCGGCTCTTCGACGAGAAATACAAGCCCGTGGTGCTCACCGACGACCAGGTGGACCAGGCGCTGTGGGAGGACCACGTTTTGCAGAAGGAGAAGAAGGACCAGCTCGCCCTGAGCCAGGCTGACTCTCTGCTGCCGTCGGAGGCCGCGAGATGAAACTCAGACCCCCCGGGTCCCCACCGGGCTCCCGGCCCCCGCAGAATGCTGGCCCGGGAATGTGCAGTTCGTGCGTGTGAGTCTCAAACGCAGAGTGGTGGAAGTAAATTATTTGCAACGTTCTCTCCCTGGGTTTTCACAAAATCGGGGGCCTCCCTCTCACCTGTTCGCTGTGAGCAGACGGCTCATTGAGAGCCTCCCTGGTTTAAGAGTTGGGGAGAGCAGAGAAACGTGCCATGTCGTCTTTATCACTGCCAGAGTTGGTAAGAAACTTTAGACGGAAATAAGCCTTTTTCACTGGGCTTTACGGTTCTCCTGACTAGGGTAACTTGCAGATTTTCGTTTTAAAATTTGACCTAAGAGGTTTATTCTCTCTTTCCACGAGGGACATGTATTTTTTAATTCAGTTTGAAGTAATTGTAGTCTCAGAGGAAATTGGAACAATAATCGAGAAATTCTGTGTGAAGGTTCACCCGGCTTCGCACAATTGATAACATTTCACACTGTCCTTATTGTTCCGTTGCTAACTCGAGTGGGACTCTTTTGTGACTCCGTGGATTGGAGCCCACAAGCTTCGTCTGTCTGTGGGATTTCTCAGGCAAGAATACTGGAGTGGGTTGCCATATTCTCTTCAGTAACCTTGAAAATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCATTTTCATGCAATGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGACGGCGGAGCCTGGTGGGTGCCATCTATGGGGTCGCACAGAGTCAGACACGACTGATGCGACTTAGCAGCAGCAGCATGTTAATGTCTATAGCTGGGTTAAAATCATACTTTTAAAACTACTGTTACAAGAGTGAGACTGCCTCTGTCACTGATGGGGTCTATGACTAGTTAATAAATCAGGAGATGAAACAACCATCTTTGTTGTTACATTGTGCTTATCTGTTTTGCTGTTAAGTTTTGGTACTTGGACCTTCCCTTCATACTATAGGGTGCATTGGACACATGGTAATGTTTATATCCTTATTTAGGGGCAGAGGAGCGTCTTTAAGCCAGCATGTCTGTTTTACAAAGGAAAAATTTTGTTATTTTTCCAGAGCTGTGGCAGACTTCATGATTGAAACTAACTCCTCAAACTCATGGTATTATCTTTGACCCTAATAACGTGCTACTAGAAACTACTGAATACTGTTACTAGCCATAAATAAAAGCTAAGTACAGAAATAAGTGAATATAAACAAAAAGCAATGAAAACAAAAGAGAAATGATACTATAAATTGTAATCCTATACCATTATCTGCTGAAGGCTCTGGACCTGAATCCTGTTGTTCAAGAGAAATTAACCAGCATCAGGGACAGGTTTAAGATGCACTGGTATCAAAATGAGACTTGCTCTTTACCATGATCATGAAGTATTTAGAAAAAAGAGACAGACTTTGCTACTGGTCCAGTGGTCAGGACTCCAAGTTTCCACTGCAGGGGGCACAGATTCTATCCCTGGTCAGGGAACTAAGATCCCATGTACCTCAAGGCATGGCCAAAATTATAAAATTTTTGAAAAGTATTAAGAGGATTGCACATCGTCATTGAGTTGGTTATTAAATGACACTCAAAGCCAGGGAGTCCTACCATATTTGCTCCCTGCTCCAGTAGCTCTGGTGTCCTGAGTTTGGTATGAGGCATGTGGACTAGAGCGGTTAGGTTTGACAGGGGCCTGATGTTCATGCTCAGCACCTTAGAGTATACACAAGACCTCCAGAGGACGGTCCAGCTTAAGCTTCGTTAACTGTTCACTGTTAAGCTTCCAGTATCCCTCAGTGCTCAGCCCAGTGTGGGCCCCAGCAAATGTTTATACTAGACATGCCCGTTATAGGTGGGAGTTGCTGTGATCCTACTGGGGAGGGGGAAGCAGACCGGGACTTGGCTTCCCATCCTTTGGCCAGTCCAGAGTAAGAGACCTTCAGATCTCAACCCTGCCCAGGGCATAAATAGCAAAGTAGACATAGTGTCTCCATTTGCATAAGGGCAGTAGAATCTGAGGAAGAAGAAGTGGGTTTTGAGGGAATTCCTGTCAATCCAATGGTTAGGACTCTGAGCTTCCACCTGATGGGAAGAACAGACTCATTGGCAAAGCCCCTGATGCTGGGAAAGATTGAAGGCGGGAGGAGAAGGGGACGACAGAGGATGAGATGGATGGCATCACTGACTCGATGGACATGAGTTTTGAGTAAGCTCCCAGAGTTGGTGATGGACAGGGAGACCTGGCATGCTGCAGTCCATGGGGTCGCAAAGAGTTAGACACGACTGAGCGACTGAACTGAACATAAATTGGCCACAGATTTGCATGTGTCACCTGCATCCTGAACGCCC EMBV3_43382 GCAGAACCAGTGCTTGCTTTCTGTTGTGTGGGAATCCAAGGCTTCTATGCTTAAAACAAC Gene BVT0102_132912 + 0 NULL GK000002.2:18345738-18382394 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104538 TCONS_00104539 TCONS_00104544 TCONS_00104541 TCONS_00104545 TCONS_00104542 TCONS_00104537 TCONS_00104540 TCONS_00104543 1 XLOC_062406 Coding TCONS_00104543 XLOC_062406 Coding Coding PLEKHA3 2:18379315-18410750 j TSS77384 4639 1 TCONS_00104543_1 289 0.157145936624272 8 0.852675446968251 0.000359575933790165 0.000145604813207883 1.92913457493291e-17 0.000177770662216511 1.91187244879471e-09 0.000154340555817298 0.000332901923694611 0.000392338090512424 0.000635455402518249 2.15364715832556e-05 7.6298839482884e-06 2.65075499812075e-05 8.81236398130765e-10 2.41788591808072e-05 3.01987867636785e-05 0.000250190991015008 0.000382599708343047 0.000121975356668417 0.000128513536568084 7.41465153652933e-21 9.9749981445864e-67 2.64922024865505e-08 0.000232759520416631 0.000470716569336134 3.29359105249884e-05 0.000254286537331695 0.000124396438884453 1.5944891791736e-05 6.32952982968472e-06 2.04909164012516e-06 XM_005202261.1 PLEKHA3 PREDICTED: Bos taurus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 (PLEKHA3), 0.0 3635 100.00 0.434145289933175 NM_019091.3 PLEKHA3 Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 (PLEKHA3), mRNA. 0.0 2668 89.54 0.432636344039664 TCONS_00104543_1 sp|Q9HB20|PKHA3_HUMAN PKHA3_HUMAN Pleckstrin homology domain-containing family A member 3; 0.0 526 94.96 0.958477508650519 0 coding 0 0 0 0 0.316888366119505 0.256993674325136 -0.00828380195834208 0.856317706604381 GCGTCCGGGATGAGAGTGGGATCCCGTAAGACGCCAGCCGAGGATAATGGAATCCTGTCCTACTATGATTCTCAAGATGACGTTTGCAAAGGAAGCAAAGGAAGTATAAAGATGGCAGTTTGTGAAATTAAAGTCCATTCAGCTGACAACACGAGAATGGAATTAATCATTCCAGGAGAGCAGCATTTCTACATGAAGGCGGTGAATGCAGCTGAGAGACAGAGGTGGCTGGTTGCTCTGGGGAGCTCCAAAGCCTGTTTGACTGATACAAGGACTAAAAAAGAAAAAGAAATAAGTGAAACCAGTGAGTCTCTGAAAACCAAAATGTCTGAACTTCGCCTCTACTGTGACCTCCTAATGAAGCAAGTTCATACGATCCAAGAGTTTGTTCACCACGATGAGAGTCATTCATCGCTCAGCATAGAGAACATGAATGAAGCCTCTTCTCTACTTAGTGCCACGTGTAATACATTCATCACGACGCTTGAGGAATGTGTGAAGATAGCAAATGCCAAGTTTAAACCCGAGATGTTTCAGCTGTCCCATCCGGACCCCTTGGTTTCTCCTGTGTCACCTTCCCCTGTTCAAATGATGAAGCGTTCTGTCAGCCATCCTGGTTCTTGCAGTACAGAGAGGAGTAGCCACTCTATAAAAGAACCCGTGTCTGCACTTCACCGACTCTCCCAGCGACGCCGAAGAACCTACTCCGATACAGACTCTTGTAATGATGTTCCTCTTGAAGACCCAGATAGACCTGTTCACTGTTCAAGAAATACACTTAATGGAGATTTGGCATCAGCAACCATTCCTGAAGAAAGCAGATTTATGGCCAAAAAGAAATCTGAATCAGAAGATCCTCTTCTATCCTTCTCTTCCTGAGGAAACGGAAGTGTCCAACTTCCGCTAAGTATTGCTATGCAAAAGCTGCTGTAATTAAACTATGTTATAGGGAGTAGTTTTTCCCTTAGGATTTCTCTGCACTTTATAGAATATTGTAAAACAAACAAAAAAACAACCCACATACCTTTGAAGTGTATTTTATCTTTATATAGTTTATTTGCAAGAGTATTTTCCTAATAACTTCACAGTATGAATGTGCATCTTTTTTTTTTTTTTTTAAACAAATGATGGTGTAACATTTTGACATCCATAAGGACAAATGTAGATATTTTTCTAAAAAACTGTGAGGGACTGACAGCTTAGTCAGTGTGTATTGTAGCTTATAAACATGAAATCTTATAAACCTAAGGTTTCAGTTTGACAGAAGTGTGATATATATATAACTTGTGCCATGGACCAAATGGTCACTTTACCCCGGTTGAAATGAGTTACGGTTGCAGCTTGATGGTGTTTGTATTATATTCCTTTAAGCAAAAAGGAAACATTTAATATTCGAGATATTTTTACCCCAAATACTATGACATTGAGGATTTTTAAAAAACCAGACTGTGCTGTCCTTCGTATATGAAGTTGACACTACTGACTTATCAATACCAAATGTTGTGTTAAAGTATTTAATTTTTACTTATTTATTTTTCTGTTGCATCAAAAAAAAAAAAAGATTGCATCCTAACTTTTATGACCTACCAAATTTAAGATGTGTGTGCATTGTTATTTACATTGTTCTAGAAAGAAGTTAATGTTGTAGTGACCTTGCTCACTTCACCAGAGAAATAAACGACTTGCAATGGAAGAGGATTTTAGTGCTTTTTTCCCAGAATAGACGTTATTAAGCTACTGTTGTAAGGTATTGATATTTGCAGCTCTTTAGAATATCTAGACTTTTTTATTTATGAATATTTATAAAAAGAGGAATCTGTCAAGGTGACTGCCCTACGTAACTTGAGAATGGCATTATTTAAAGAACAAATAGCATTTTCTGGTAGTGCCTGTCCACGCCGTCAGTGTTTGCCTTGTAAACTGTTTTTTCAATTCACTTTGGAGTGATGGTTTTGTCCAAGGTTTTAGATGAGGAGCACTTTAAAACAAACTGGTTTGGTGTTTTTAAGTTAATCATATGTTTAATAAATATGTGGTTTTTGCATTCAAACTCATCATATAATACATTGTATTTTTTACATTTATTGGTAGTTTGTCTAATCTTTATCAAATGGTAATAATATTCTTTATTGCTTTGATTTTGTTTGTATATTTAGATCTCATAGTAAATACACAAGTAAGGCATATTTTTAGCTTTTTTGCCTGTGAGCTTAGAATGTTATGTCCTATTTCATTTTAAATTTCTCTTGTAAGTTTATGTGGGAATTGTTTTAAAAGATTTGTTTAAAATATTTTTTAAACAAATTAAAAAAAATTTGTTATTTCCTTATTAAAATAAGTGTAGTTATAGGCTTTCTTAAGTTTAAAATGGACATAAACAATCTATACACATTAATATACATTTAGATAAACTGTATGCTACTTAAAGTATTTGAAATTTTAAATAGCACACAGGTCATTAGACTATATTAGGAGGAATCTTTTCTGCTCATGTTGTACTTCATATGTCTAGTTTGAGAAAAAAGAAGTTTGATAATATAGTAAGCTTTCATGTTGAGTGAGTTATCAGGTTTTTGGTTTCTTTTTTTATTTTTTGTAATAGGAATGAGTAGTGATAAGACCATGGAGATCAAGGTGCTACTACTGAGTGTGGGAGTTTTTCTAGTAGTTTTTTTTTTTTTTTTTAATCAATAGGTTTATAATGGAAACACTATAACAAAGCTTTTGAACTCATGGAAAATAAATCCATTTTATATTGCTTTATCCAAAAATATGAGTTCCTGAACAGTTTTCTGTAAATATTTTTAAAAATAAAATACAGTTATTTCTGGCTCATATCATTTTTTTCTCCTTGAAGTAGGTGCTTTGACCAAGTTTGCTGTATTCCTAAATATGGATTTTTATTGTGACTGGAATCACCTTTTTTCCCTTAGGAATCAACTCATTTGTGAAATCTTTTTTTTTTTTAGGGAATATCAGTGTATCTGGAATTACACCTGGGTTTTGACCAGTGAGTTGGTATCATGAAGCAAAGCTTCAGGGAACCTTGCATTTTGAGGAGCCCAGTGTATTTTCAAGGGTGCCTGACTTTTCTGAATCTTAAGAAAAAGATGAACCAAATAAGAAAAATTTCATAAGAATTTTGGTTTGTTATGATTTTTGTAGTGTCTAATTATTGGTTGTTCTTGTTTTACTTTATCTAGGCCTTGGGGTTGAGAAATTTGGAGACTCTTGGTATATCAATGATCTAAGCAGAACCAGTGCTTGCTTTCTGTTGTGTGGGAATCCAAGGCTTCTATGCTTAAAACAACTCTGATGAGAGTTCTTTTGTAAGTGGACCAAATTTGAACTTTGTTACATTACACTGAATTATTGTGTTATCTTCAGTCAGGACAAGTCCAGAAATGGATGCTATTTAAACTTAAATTCCAAGGCAAGAGATAAAGTATCTTCATTTTGACAATCTCCATGGAACCTTTCACCTTGAATTGTAGGTTTTCTCTGTATGTTATTATAATTAGTGTTTAGAAGTTATCATAAGATCTCAGGAAATACAGTCTTGTAATATGTGACTCCGTGCATGTTATTAATTTGGACTCCACCAATTCTTGACTTACTACATGAAGTGCCTCTGGGTCTGTCCTTTGAACCTTGCTCCTGCCTCTTGGTGCAGAGGGTATGTGCTGGCCTGTAAAAAAGCCTGGTTAGGCTGCAGGAGCTCCTTGGAGGAGGTCTCTCTGAATAGCCCTGATCAGGTAAGTAACTGGAGCTGGTAGATGGGGCTTCCTTCTCATGCTTTTCACTTCCACAGTCCTCCTTTCTTTGAATTCATACTGAGTTTGTAAATTTGAATTATTTTTTTAAATTAGCTTTTTTGTTTTTTAAGTAATTCATGCACATAGTTAAAAAAATCAAATAGAAGCTAGAAGGCTTGGAGTGAAAAGAAGTAATTCCTCCTCTTAGTGCCCTAGAGGCAAGTACTTCTAGCTCTCAGTGGTTGGTTCTAGTATTTACCTTCCTATTTTAAAATACGTTTTATTACTCTTTCTTGATTTGTCGATTTTTGAAATGTTTTTTAAATTGCTTTTATGGCAGGCAGGCAGGATTACTTTGCTTATATCCTCACCTCCCCTATATCCCCAGTGTAGATTAATCACAACTATTTGTTAAATCTATGGATATAAATATTGTTTATTGATCATTATCAGTTTTTCCTATCATTATTTACTTTCTACTCAGTTCAGTTCAGTCTCTCAGTCATGTCTGACTCTTTGCGATCCCATGGACTGCAGCACCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTTACTCAAACTCATGTCCATTAAGTTGGTGATACCATCCAACCATCTCATCTTCTGTTGTCCCCTTCTCCCGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTTAAATGAGTCAGTTCTTCACATCAGGTGGCCAGAGTATTGAAGTTTCAGCTTTAGCATCAGTCCTTCTGATGAATATTCAGGACTGATCTCCTTTAGGATGGACTGGTTGAATCTTCTTGCTGTCCAGGGGACTCTCAAGGATCTTCTCCAACACCACAGTTCAGAAGCATCAATTCTTCGGCACTCAGCTTTCTTTATAGTTCAAC EMBV3_08413 GCCTAGGTTTTGAGGCAAGTATAAGGTTTCATGTAATGTCATCCCTCCTGCAGCTTCCTG Gene GeneID:509186|TKTL2:NM_001046025:49_cdna Constitutive 0 NULL GeneID:509186 6 GENE TKTL2 MGC133952 transketolase-like 2 EMBV3_17557 GCAGAAACTGCTTGCAATCATTGTGGGCAGTGGATGGAAGAATTTAAAAATGATATGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26369 CTGCTTCTCCTGGAAACCTTTGCTGATTTGCGAAACCATTGTTTCTCAGGATTGGAAGGG Gene BVV0102_304822 + 0 NULL GK000008.2:96635640-96811853 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38885 TATCTCAGCCATGAGGAAGGTCGTGTTGCAGTCTTTTTCATTGAGTCCATTTGTAATGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36839 ATCACAAATCCACATCTCACTTCCGCACAGGTAGATGATCATGATGGGGAAGGTGATGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20941 GTGGATTAATTCCCAGTGAAGATGCAATGTGTGTTGAGGCGGACACAGGTTCCTGATCCT Gene BVV0102_012494 + 0 NULL GK000015.2:52160180-52166905 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059512 TCONS_00059515 TCONS_00059507 TCONS_00059508 TCONS_00059510 TCONS_00059516 TCONS_00059517 1 XLOC_036442 Coding TCONS_00059517 XLOC_036442 Coding Coding NUP98 15:52098804-52184394 j TSS44658 6617 1 TCONS_00059517_12 1791 33 0.923074226828214 0.0122799841612648 0.00936164516437065 0.00829966807260669 0.00491965837679046 0.00602833351906324 0.00385650144958973 0.00325654951167585 0.00550607865714754 0.00555041080589799 0.00429855029114111 0.00140955793354599 0.00198225609123402 0.000652992272839051 0.00112303498693706 0.0018256537868667 0.0155130511256204 0.00195508934368734 0.00676671358066132 0.00949425155109698 0.0139259775568507 0.0072687461460733 0.00751477862877935 0.00330217443930592 0.00807652718623513 0.0106756698993149 0.0122108390094085 0.00859856928760036 0.00138801499170877 0.00172195483685608 0.00272553160639615 XM_005216209.1 NUP98 PREDICTED: Bos taurus nucleoporin 98kDa (NUP98), transcript variant 0.0 1.180e+04 100.00 0.98881668429802 NM_016320.4 NUP98 Homo sapiens nucleoporin 98kDa (NUP98), transcript variant 1, mRNA. 0.0 8421 88.39 0.98715429953151 TCONS_00059517_12 sp|P52948|NUP98_HUMAN NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96; 0.0 3331 92.35 0.998883305415969 0 coding 0 0 0 0 0.0792153866667372 0.533522424772614 -0.00839107599441188 0.856237333206535 ACAGCAGTCATTTGGTACTTCTTGTATCTTGGGACTCATAACTCCTCTCTTACGGAATTTGAAAACAGAATAAGCTTTCTGAAGATTTTGAAGATGTTTAATAAGTCATTTGGAACGCCCTTTGGGGGTGGCACTGGTGGCTTTGGCACAACTTCAACATTTGGGCAGAATACTGGATTTGGCACTACTAGTGGAGGGGCATTTGGAACATCTGCATTTGGTTCTAGCAACAATACTGGAGGCCTGTTTGGAAATTCACAGACCAAACCAGGAGGCTTATTTGGTACCAATTCATTTAGCCAGCCAGCTACCTCCACAAGCACTGGCTTTGGGTTTGGCACATCAACAGGAACATCAAATAGCTTGTTTGGAACTGCAAGCACAGGAACCAGCCTCTTCTCATCCCAAAACAATGCCTTTGCACAAAATAAGCCAACGGGCTTTGGGAATTTTGGAACAAGTACCAGCAGTGGGGGACTTTTTGGAACTACAAACACCACCTCTAATCCTTTTGGTAGCACATCTGGCTCTCTCTTTGGGCCAAGTAGTTTTACAGCTGCTCCTACTGGGACTACTATTAAGTTTAACCCTCCAACTGGTACTGATACTATGGTTAAAGCTGGAGTTAGCACTAACATCAGTACCAAGCACCAGTGTATTACTGCTATGAAAGAATATGAAAGCAAGTCACTAGAGGAGCTTCGTTTAGAGGATTATCAGGCCAACCGGAAAGGCCCACAGAATCAGGTGGGAGCAGGTACCACGACTGGCTTGTTTGGGTCTTCTCCAGCCACCTCCAGTGCAACAGGACTCTTCAGCTCTTCCACAACGAATTCAGGCTTTGCATATGGTCAGAACAAAACAGCCTTTGGAACTAGTACAACTGGATTTGGAACAAATCCTGGTGGTCTCTTTGGCCAACAGAATCAAACTACCAGTCTCTTCAGCAAACCATTTGCCCAGCCCACAACCACCCAGACCACTGGTTTTTCCTTTGGTAATACCAGCACACTAGGACAGCCAAGCACCAACACCATGGGTCTATTTGGAGTAACTCAAGCCTCACAGCCAGGAGGTCTTTTTGGGACAGCTACAAACACCAGCACTGGGACAGCATTTGGAACAGGAGCTAGTCTCTTTGGGCAGACCAGTACTGGATTTGGTGCTGTTGGTTCGACCCTGTTTGGAAATAACAAGCTTACTACGTTTGGAACCAGCACAACCAGTGCTCCTTCATTTGGATTCGGCACAAATACCAGTGGGAATAGTATTTTTGGAAGTAAACCAGGACCTGGCACTCTGGGGACTGGGCTTGGCGCAGGATTTGGAACAGCTCTTGGTGCTGGACAGGCATCTTTGTTTGGGAACAACCAACCTAAGCTCGGAGGGCCCCTTGGTACAGGAGCCTTTGGGGCCCCTGGATTTAATACAACGACAGCCACTTTGGGCTTTGGAGCCCCCCAGGCCCCAGTAGCTTTGACAGATCCAAACGCTTCCGCTGCCCAGCAGGCTGTTCTCCAACAGCACATCAATAGTCTGACATACTCACCTTTCGGAGACTCTCCTCTCTTCCGGAATCCCATGTCAGACCCTAAGAAGAAAGAAGAGAGATTGAAACCAACAAATCCAGCAGCCCAGAAGGCTCTCACTACGCCTACTCATTATAAACTGACACCCCGCCCTGCCACCAGAGTCCGACCAAAGGCTTTACAAACAACAGGCACAGCCAAGTCACATCTTTTTGATGGACTGGATGACGATGAACCATCCTTAGCCAATGGAGCATTCATGCCCAAGAAGAGCATTAAGAAGTTGGTTTTGAAAAACCTTAACAATAGCAGTCTATTCTCTCCTGTTAATCGTGATTCAGAAGATCTAGCTTCACCATCTGATTATCCAGAAAATGGAGAGAGATTCAGTTTTCTGAGCAAACCAGTGGATGAGAATCATCAGCAGGATGGAGAAGATGATTCTCTTGTGTCACGTTTTTATACTAACCCTATTGCCAAACCCATTCCTCAAACCCCAGAAAGTGCTGGAAATAAACATAACAGCAGCAACAGTGTAGATGATACTATCGTTGCATTAAACATGCGTGCTGCCTTGCGAAATGGACTGGAAGGAAGCAGTGAAGAGACCTCTTTTCATGAGGAGTCACTGCAGGATGACCGAGAAGAAATTGAAAATAATACTTACCATATACATCCAGCAGGCATCATTCTCACTAAGGTTGGCTACTATACTATTCCATCCATGGATGACCTTGCTAAAATTACCAATGAAAAAGGAGAGTGCATTGTCTCTGACTTCACTATTGGTCGTAAAGGTTATGGTTCGATCTATTTTGAAGGAGATGTGAATTTGACAAATCTAAATTTAGATGACATTGTACATATCCGAAGGAAAGAAGTGATTGTCTACTTAGATGATAACCAAAAACCACCTGTGGGTGAAGGACTAAATAGAAAGGCTGAGGTTACATTGGATGGAGTTTGGCCAACAGATAAAACATCTCGTTGTTTAATAAAGAGCCCGGATCGACTTGCTGATATCAACTACGAGGGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTCAGTTCAAAGAGTACCGTCCTGAAACAGGTTCTTGGGTGTTTAAGGTCTCTCATTTTTCTAAGTATGGTCTTCAGGATTCTGATGAAGAGGAGGAGGAACGGCCATCCAAAACTAGTACAAAGAAGTTGAAGACTGCCCCTTTACCTCCTGCAGGCCAGGCCACCCCATTCCAGATGGCTCTTAATGGCAAACCAGCACCTCCACCCCAGAGCCAGAGCCCAGAGGTGGAGCAGTTAGGGAGGGTTGTGGAACTGGACAGTGACATGGTAGATATCACCCAGGAGCCAGTTCTGGATTCCATGTTAGAAGAGAGCGTGCCTGAGGATCAGGAACCTGTGTCCGCCTCAACACACATTGCATCTTCACTGGGAATTAATCCACATGTGTTACAGATCATGAAAGCATCATTGCTTGCTGATGAAGAAGATGTAGATACGGTCCTGGATCAGCGCATCAGTCACCTTCCTTCTAAAGCAGATACTTCTCAAGAAATATGTTCTCCCAGGCTCCCCATCTCAGCAACTCACTCATCAAAACCTCGTTCATTAGTAAGTGGGTTACTACAATCAAAATTTACAAGTGGGACTTTCCTTTCACCAAGTGCCTCTTTACAAGAATGTCGTACTCCCAGAACATCATCGTTGATGAATATACCGCCCACATCCCCTTGGTCTGTTCCTCCACCCTTGACTTCTGTGTTTACGGTGCCCAGCCCAGCCCCTGAGTTTCAGTTGAAAACAGTGGGTACCCGCAGACAACCAGGCCTAGTCCCTCTTAAAAAGTCTGTCACCTATGGAAAGGGGAAGCTCCTGATGGACATGGCCCTATTTATGGGACGATCATTTCGGGTTGGTTGGGGCCCCAACTGGACGCTTGCTAATAGTGGAGAACAGCTGAGTGGTTCTCTGGAACTGGAAAATCATCAGATTGCTGACTGTATGGAATATGGATTCCTGCCTAATCCAGTAGCTGTTAAATCCCTAACTGAGTCTCCATTCAAAGTTCATTTGGAAAAACTTAGTTTGAGGCAAAAGAAGCTGGACAAAGACCTGCAATTATACCAGACATCTCTGGAGCTTAAATTAAAACATAGCACTGTTCACGTGGATGAGCTGTGTCCTCTTATTGTCCCCAATCCGGGAGTTGCTGTCATTCATGACTATGCAGATTGGATTAAGGAAGCATCGAGAGATTTATTGGAACCACAAATTGTGAAGCACTGGAGCCTAACGTGGACATTATGCGAAGCTCTGTGGGGCCACCTAAAGGAGCTTGATAGCCAGCTGGATGAGCCCAGTGAATACATTCAGATTCTGGAGCGAAGGAGAGCTTTTTCTCGCTGGCTGTCCAGTACTGCCTCACCTCAAATTGAGGAAGAAGTCTCCTTGACCCGAAAAGACAACCCTATGGAGGCTGTCTTCAGCTACCTCACGGGCAAGAGGATCAGTGAGGCCTGCTCCCTGGCCCAGCAGTCAGGTGATCATCGTCTTGCTCTTCTTTTATCCCAGTTGGTTGGCAGCCAATCAGTTCGTGAGCTGCTTACTATGCAGCTGGTGGATTGGCATCAACTCCAGGCTGACTGCTTCATCCAGGAGGAGAGACTGCGCATCTTTGCCCTCTTGGCTGGAAAACCGGTGTGGCAGCTCTCAGAGCAGAAGCAAATCAATGTGTGCTCCCAGTTGGATTGGAAACGCTCCCTGGCTGTCCATCTTTGGTATTTGCTTCCACCAACAGCTTCCATTTCCAAGGCGCTCAGCATGTATGAAGAAGCATTTCAGAATACCTCTGATAGTGACAGATACGCCTGCTGTCCACTTCCCTCATACCTGGAGGGCTCTGGATATGTGGTAGAGGAGGAGCAAGACTCACAGAGACCTCTTCAAGATGTCTGCTTTCACCTTCTAAAACTCTACAGTGACAGACATTATGACCTCAACCAGCTGCTGGAGCCTCGAAGCGTAACTGCGGATCCTTTGGACTATCGCCTAAGCTGGCACTTGTGGGAGGTGCTGCGGGCTCTTAACTATACCCATCTCTCAGAGCAGTGTGAGGGTGTGCTGCAGGCCAGTTATGCTGGCCAACTGGAGAGTGAGGGCCTTTGGGAGTGGGCCATCTTTGTCCTCCTGCACATTGACAACTCAAGCACGCGGGAGAAGGCTGTTCGAGAGCTGCTTACCCGGCACTGCCAGCTGTTGGAGACCCCTGAATCTTGGGCTAAGGAGACTTTCCTGACCGAGAAGCTTTGTGTGCCCGCTGAATGGATTCATGAGGCCAAAGCAGTGCGAGCACACATGGAATCCGACAAGCACTTGGAGGCCCTCTACTTATTTAAAGCAGGACACTGGAACAGGTGCCACAAGCTCGTCATCCGGCACTTAGCTTCTGATGCCATTATTAATGAGAACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCTCTGGAGCGCAGTGGCCTAATCCAGGACTGGGAAACATCTGGGCTTGTTTACCTGGACTACATTAGGGTCATTGAAATGCTCCGTCATATACAGCAGGTGGATTGCTCAGGTTATGAACTCGAGCAGTTGCACACCAAAGTGACCTCACTGTGCAACAGGATAGAGCAAATCCAGTGTTACAATGCCAAGGACCGCCTGGCTCAGTCAGACATGGCCAAACGTGTAGCCAACCTGCTGCGGGTGGTACTGAGCCTTCAGCATGCCTCTGATACAACCTCCGACTCAACGCCAGACCCTCAGCGAGTCCCTTTGCGCCTGTTGGCTCCCCACATTGGCCGGCTCCCCATGCCTGAGGACTATGCCTTGGAGGAACTGCGCAGCCTCACACAGTCCTACCTGCGGGAACTGACTGTCGGGAGCCAGTGAGCCCTGGGCTCCTCCCACCACACTCACATGCTTGTTCACACTCACCACACAGAGGGCTCCTGCATCAAGTTGATTGCCCTGTTTGCCGTTCTCTGGCTTGGCCATGGAATCTCCCCTCCCTTCCTGCTGCCCAAGCAGCAACCTCCAGTTGTTCAGGGCTTTCTTAATACTAAACGTAGCATAAGGGCTTTTGGAACCCCCCAAAAAAGGAGCCAAGTCTCTCTTTACCATCCTCAAGAGCCATTCTTTTTTTTTTCCTTTTTAGAAATGGTCAATAAAGCACCTTTGGCAGAATTCCCCAAAGAACCAGGGAATGCTTTTCCTCCTTCAGCCATTCTGAATCTTGTGACTGTCAATGCCAACTGCTACCCTGCTCCTACTCCTGCCCTTTCATCCCCAGACTCTTTAGAAGGAGTGGGGCAGGGGCTGGGACAAATGTGTTGACCTAGGACCTTCCTTAACAAGTGAACTATCCACAGAAGGAAGAGACTCTGTCTCTGGAGTAGATTGATGATTTGCATGACTTTTGGAATCAGGAGAGGATTGAACTGAGGAAGCAGAACAGGGTCTTTCTGACTCATTTAAGGTAGAGTGAGTGCCTGCTATGGAGCCATGGGGCTTCAAGGCTTGATTGTTCTTCCTGCCTTGAATGTTCCCGTGAACACCACAACTTCCCTGTGCAGGAGCCCTTGGTCTCAGACTCCAGGTCTCTGGGAAACTCCCAGAACTCATTTTGGTGCCTGGTTTTCAGTCATCTGGCAAGGCCTCCTGCCTGAATTTCCCTGATGAGTTTCAATGAAACATGGTAGATCGGGTAGCCCTCCCTTTCCCTCCCATTCTAGCCCAAAGCATTTCCCACCCTCCATCTACAGTTGCAGAAGGTAAAGCCCTCACTGAGGCAGGGACAGGCAGAGGGTCTTCTCTACACTGTAGCCAGCTCTGGGGAGCCCCAGGTAACCACCGGAGACTGCTGGTGTGCGGGCTATCATGGACAGCATGGCCACGCCTGGGTCTTTATGCATGAAAATTATGTAAAGGTTTTTATTAAAAAATATATATATATATATATATATATAAACGATCTAGATTATTTTCCTCTTTTTCTGAAGCTACTTTCTTAAAAAAAATAAAATGAAATGTTTATAGCA EMBV3_40182 CCGCATCCTCTTTCTCCTATCGGTTCTCGGGTCCGTGATGACAATCTTTTCTCTTTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15229 GGTTTGCCTGGAATACCTGCTGGGCCTCTCTCCATCACTCCAGGCTGAAGCATATTTACA Gene BVV0102_085448 + 0 NULL GK000011.2:92553316-92577650 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033779 1 XLOC_020012 NonCoding TCONS_00033779 XLOC_020012 NonCoding NonCoding - 11:92558482-92558814 - TSS24778 332 1 TCONS_00033779_1 56 1 0 0 0.000121065512538482 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000238658850019372 0 7.55750486030262e-05 0 0 0 0 0.00500150697470945 0.000656445033283531 0.000166951176035574 0 0 0 0 3.62183098926475e-05 0 noncoding 0 0 0 0 -0.107582486803931 0.425003086984072 0.0777308530672227 0.199498129509111 AGTAGGTTTGCCTGGAATACCTGCTGGGCCTCTCTCCATCACTCCAGGCTGAAGCATATTTACACGGGACATGTCTGTCTGTGTCTGCGGCCCCCAGACTGGTGGAGGGATGTCAGCTACAAAGCATGGCTGGCAGATAGGAGTGCTGGACCCCGGATTGGGTGCCCCAGCACCTCGTGGTACCAGAAATTTGCCTGTGAATCTGATGTCCCTTGCTTTCTTGAGCCACGTGAGCTGGTGAGCTGGAGTCTTCTAACCCAGTGTCTGGCCATTGTTCTGCAGATGAGAGGGTTGGTGGAGAGAGCAGGCCCCATACCCTCAACCCTCCCCCT TCONS_00025888 . 5' 13366 TCONS_00025888 . 5' 13366 EMBV3_17527 TCAAGTGGAACGTGAAGTGGAAAAGAGCCATACCTGATGATGACTTGGAGAGACACTGGG Gene GeneID:535831|ASB4:XM_002686658:95_cdna Constitutive 0 NULL GeneID:535831 4 GENE ASB4 NULL ankyrin repeat and SOCS box-containing 4 EMBV3_01252 GCCCAAGGTTCCGGCGTCAACGGCCACTGCGTGTGGCTGCTCTGAGTGAGGAAAAAATTA Gene GeneID:534705|TLK2:XM_002696061:381_cdna Constitutive 3 NULL GeneID:534705 19 GENE TLK2 NULL tousled-like kinase 2 EMBV3_07840 AGATCACACCACGGGGGCCCCAGCCTCCGTTTGCAGTTCACGATCAATAGATTGCAAAAT Gene GeneID:497202|GPAM:NM_001012282:18_cdna Constitutive 2 NULL GeneID:497202 26 GENE GPAM NULL glycerol-3-phosphate acyltransferase, mitochondrial EMBV3_27708 CTCATGATTAGAAACGCTTTATGACGACACTCCATGACACCGACATCTACGCGTGCTCGC Gene BVT0102_232065 - 1 EMBV3_13549 GK000004.2:115951992-116058790 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07231 CCGAATCCCCACCCCTTCTGGTGTGAGTCCCATCTGTATGGTTTTGTTGCTTCCAGTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37284 GATTTTTTTTTTGCACCCATGCTGTTGATTGCTAAATGTAATAGTCTGATCATGACGCTG Gene GeneID:505093|HNRNPA1:NM_001045911:15_cdna Constitutive 0 NULL GeneID:505093 5 GENE HNRNPA1 HNRPA1 MGC128297 heterogeneous nuclear ribonucleoprotein A1 EMBV3_05579 TGTCTGAAGGAGATAACCAAGGCTGCTACCCGCTAGATGGACACATCCTCTGCAAGACCT Gene GeneID:524132|LPP:XM_002684839:184_cdna Constitutive 1 NULL GeneID:524132 1 GENE LPP NULL LIM domain containing preferred translocation partner in lipoma EMBV3_41499 CAGTGATGCCAAGGAGATCTACGAACGCTGTACCTCCCTGTCTGCTGTGCAGATCATAAA Gene GeneID:532574|MYO5C:XM_002690963:339_cdna UTR3_Alt 2 NULL GeneID:532574 10 GENE MYO5C NULL myosin VC EMBV3_32833 TCTCTGGAAGAAGCAGGAAAGAGAGAAAGGCAGCTGATGGACTTCAGGGAGGTGGTTTCT Gene GeneID:787062|LOC787062:XM_002690340:20_cdna Constitutive 0 NULL GeneID:787062 9 GENE LOC787062 NULL similar to chromosome 6 open reading frame 97 EMBV3_09736 ACTCCTGGACCCACGTGTCCTGCAAGAAGGAGCAGAAGTTCATGGTGAAGGAGGCATTCC Gene GeneID:507351|C17H12orf43:NM_001031753:84_cdna Constitutive 0 NULL GeneID:507351 17 GENE C17H12orf43 C12orf43 FLJ12448 chromosome 12 open reading frame 43 ortholog EMBV3_16400 ACGCGGCACCCCTTCAGCAACACTAGGTTTCAACGACTCACAGCATTTGCACGTCCATGT Gene GeneID:787908|LOC787908:XM_002694639:23_cdna Constitutive 1 NULL GeneID:787908 17 GENE LOC787908 NULL similar to Uncharacterized protein C22orf30 EMBV3_24344 AGAACCATCCGTAAATGTATGCGCACTACGCCTGACAGGGTGCTTTTGTCCCCATTCCTT Gene BVV0102_056593 + 0 NULL GK000022.2:11651005-11674323 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17227 GCCATGAGAGAGAACAGGTTTGAATTTTGACCAGGGGAGATGCTTGTGAACTGTGGGGAC Gene BVV0102_192535 + 0 NULL GK000018.2:4457156-4559080 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085295 TCONS_00085288 TCONS_00085292 TCONS_00085287 TCONS_00085298 TCONS_00085296 TCONS_00085297 TCONS_00085286 TCONS_00085289 TCONS_00085291 TCONS_00085284 TCONS_00085285 TCONS_00085294 TCONS_00085290 TCONS_00085293 1 XLOC_051828 Coding TCONS_00085293 XLOC_051828 Coding Coding ADAMTS18 18:4557214-4877014 j TSS63723 5252 1 TCONS_00085293_10 846 0.0293221629855293 20 0.98363972370145 0.000906633041355131 8.22194873000604e-05 0.00151097275030667 4.61160533678079e-05 0.000661426325808785 7.4951547366838e-09 1.111799099269e-05 0.00032762659473345 0.000590631064177334 0.000358405430430334 3.839886963314e-44 9.64327704706943e-06 1.4562230736444e-34 0.000585306669911696 2.09044416218133e-33 1.11552445268614e-08 0 1.021693173552e-08 0.000509880071447339 0.000652951333197759 0.000342617390019752 1.83642256844761e-05 3.38207362708975e-41 4.14453803958382e-05 0.00160358736072224 0.00107370734942016 0.000534549586843173 1.80175850357054e-19 1.66499257624959e-17 1.68518599424045e-19 NM_001192486.1 ADAMTS18 Bos taurus ADAM metallopeptidase with thrombospondin type 1 motif, 18 (ADAMTS18), mRNA. 0.0 3247 99.78 0.344440213252094 NM_199355.2 ADAMTS18 Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 18 (ADAMTS18), mRNA. 0.0 2969 77.69 0.699352627570449 TCONS_00085293_10 sp|Q8TE60|ATS18_HUMAN ATS18_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 18; 0.0 1120 84.62 0.725768321513002 0 coding 0 0 0 0 -0.311572816418327 0.05262378611145 -0.0734624257152435 0.244237177300902 TAGTGTCTAGGGTCTACAGCTGGCGTCAGCCTTGCAGGATAGCGGGGTCAAGAGTCCCAGGGTGCAGGCAGCCTCCAGAAGCTGGAAAATGTCCAGGGATGACGGATTCTCCTCTGGAGGGTCCAGGAAGAAGTCCAGCCCTGCCGACCACCTGACCTTAGGCCCGTGAGCCTCTCCTCGATTTCTGACCTCCAGAACGGCGCTCCAGCTGTGTTGCCTCTGCTGCGCGTCGGTCGCCGCAGCCTTAGCCAGTGACAGCCGCGGCGGGGAAGGCAGCGGATTAAACCACGATTACGTCTTTGTCACGCCAGTAGAAGTGGACTCGGGCGGGTCATATATTTCCCACGACATTTTGCACAACGGCAGGAAAAAGCGGTCGGCGCAGAGTGCCAGCAGCTCCCTGCATTACCGATTTTCAGCATTTGGACAGGAACTACACTTAGAACTTAAGCCCTCGGCGATCTTGAGCAGTCACTTTATTGTCCAGGTACTTGGGAAAGATGGTGCCTCAGAGACTCGGGAACCCGCGGTGCCGAGATGTTTCTATCAGGGATTTATCAGAAACGACAGCTCGTCCTCCGTCGCTGTGTCTACGTGCGCCGGCTTGACAGGCCTCATAAGGACACAAAAAAATGAATTCCTCATCTCGCCATTACCTCAACTCCTGGCCCAGGAACACAACTACAGCTCCCCCGCAGGCCACCATCCTCACGTGCTGTACAAAAGGACTGCGGAGGAGAAGATCCGGCGTTGCCACGGCTACCTGAGCTCCGGCCGGAACCCCGCGGGTCACCCCCCAAGTCACACTCCCCACACCTCTTGGAGTCCAGAGAGAGAACAGCATCATGGAAGGTTGCAAAAGCAGCATTTTTGTGGACGACGCAAGAAATGTATACGCCCCTAAGCCTCCCACAGAGGACACCTATCTCAGGTTTGATGAATATGGGAGCTCGGGACGGCCCAGAAGGTCAGCTGGCAAGTCACAGAAGGGCCTCAACGTGGAAACCCTTGTGGTAGCAGACAAGAAGATGGTGGAGAAGCATGGCAAGGCCAATGTCACCACGTACATTCTCACGGTCATGAACATGGTTTCCAGCCTCTTTAAAGATGGGACCATTGGAAGTGATATAAACATTGTCGTGGTTAGCCTCATTCTTCTGGAACAAGAACCGGGAGGATTACTGATCAACCATCATGCGGACCAGTCTCTGAATAGTTTCTGTCAGTGGCAGTCTGCCCTCGTTGGAAAGAATGGCAAGAGGCATGACCATGCTATCTTACTCACGGGATTTGATATCTGTTCCTGGAAAAATGAACCATGTGACACTCTAGGGTTCGCCCCCATCAGTGGGATGTGCAGCAAGTACCGAAGCTGTACCATCAATGAGGACACAGGGCTTGGCCTGGCCTTCACCATCGCTCACGAGTCAGGCCACAATTTCGGCATGGTTCATGATGGAGAAGGCAACCCCTGCAGGAAAACGGAAGGCAATATCATGTCACCCACGCTGACCGGAAACAATGGTGTGTTTTCATGGTCTTCATGCAGCCGGCAGTACCTCAAGAAATTCCTTAGGCCTCAGTATGGCGGCAAGTTCTGTCCTGGCTCTAGCCGTGTTTATCAGCTGTGCAATATTAACCCTTGTGATAAAAACAGCTTGGATTTCCGAGCCCAGCAGTGTGCAGAGTATAACAGCAAGCCTTTCCGTGGATGGTTCTACCAGTGGAAACCCTATATGAAAGTGGAAGAGGAAGACCGATGTAAACTGTACTGCAAGGCTGAGAACTTTGAATTCTTTTTCGCCATGTCCAGCAAGGTGAAAGACGGGACTCCTTGTTCCCCAAACAAGAACGACGTTTGCATTGACGGGATCTGTGAACCAGTGGGATGTGATCATGAACTTGGCTCTAAAGCAGTTTCAGATGCCTGTGGTGTTTGCAAAGGTGATAACTCAACTTGCAAGTTTTACAAAGGCCTGTACCTCAACCAGCACAAAGCAAATGAGTATTACCCGGTGGTCACCATCCCGGCGGGCGCCCGCAGCGTCGAGGTCCAGGAGCTGCAGGTATCCTCCAGCTACCTCGCGGTCCGAAGCCTCGGTCACAAGTATTACCTCACAGGGGGCTGGAGCGTCGACTGGCCAGGGGAGTTTGCCTTTGCGGGGACCGTGTTTGAGTACCAGCGTGCCTTCAACCGCCCCGAATGCCTGTCTGCACCGGGCCCCATCAATGAGACGCTGGTCTTTGAAATTCTCATGCAAGGCAAAAACCCAGGAATAGCTTGGAAGTATGCACTTCCCAAGGTCACGAATGGAACTCTGCCAGCCTCAAAAAGACACAGCTACGCCTGGAGCACAGTGCAGACAGATTGCTCCGTCTCCTGTGGGGGAGGTTACATAAGTGTCAAGGCCGTTTGCTTACGAGATCAGAACACTCAAGTCAATTCCTCGTTCTGCAATGCAAGAGCCAGGCCAGCAACTGAACCCAAAATGTGCAATGCCTTCTCCTGCCCTGCCTACTGGAAGCCGGGCGAGTGGAGCGCCTGCAGCAGGTCGTGTGCGGGAGGCCAGCAGAGCCGGAAGGTGCAGTGCGTCCAGAAGAAGCCCTTCCAGAAGGAGGAGGCGGTCCTGCACTCTCTCTGCCCGGTGAGCACACCCACTCAGGTTCAAGCCTGCAACAGCCATGCCTGCCCTCCGGAATGGAGCCCTGGGCCCTGGTCTCAGTGTTCGAAGACCTGTGGGCGAGGAGTGCGGAAGCGTGAAGTCACGTGTAGACGCGCTGCCATGGCAGAGGCCGTGCCCGAGAGCGCATGCGCTGGCGCCCCGAGACCAGACTCGCAGGAGGGCTGCGTGCTCGGACGCTGTCCCAAGAACAGCCGGCTCCAGTGGCTCATCTCTTCGTGGAGTGAGTGTTCCGTGAGCTGTGGTCTGGGAGTGAGGAAGAGGGAGATGAAATGCAGCGAGAAGGCCTTCCAAGGCAAGCTGATAACTCTCCCCGAGCGACGGTGCCGCAATATTAAGAAACCAAACGTGGACTTGGAGGAAACCTGCAGCCGGGGGGCGTGTCCCGCCCATCCAGTGTACAGTCTGGCCGCTGGGTGGTATTCATCGCCATGGCAACAGTGCACCGTTAGCTGTGGCGGAGGGGTGCAGACACGCTCCGTCCACTGCGTCCAGCAGGGCCGGCCTTCCTCGAGCTGTCTGCTGCGGCAGAAGCCTCCAGTGCTGCGGGCCTGTAACACCAACTTCTGTCCAGCTCCTGCCAAGAGAGAGGATCCATCCTGTGTAGACTTTTTCGGCTGGTGTCGTCTTGTTCCTCAGCACGGCGTCTGCAACCACAAATTCTATGGCAAGCAGTGCTGCAGGTCATGCAGCAGAAAGAGCTGATCTCGACGCCCTCCCCTCCTGGCAGGGCCAGGGTCTTACCTCGCAACCTCCGCAGAGACCTGCCCCCTTCCCATCGAAAGCTGAACACTGCAGACCCCGTGTGAGCCGACCGCCATGTTGGAGGGGTTGCTCTCGAGAATAGCCTGCTTGTTCATTTCCCTAACACACATGGTACTCAGAAGCACTTGAAAATGGGAAGCAATGACAAATCGGACTCACAGAAGCATAGAACAAAAACAGACCGGCTTTGCTTTGCACTGTTACAGGAAGGAGGTGATGGCTTGCCATGAGAGAGAACAGGTTTGAATTTTGACCAAGGGAGATGCTTGTGAACTGTGGGGACAGACCCCACCCCAGGGAACCTCAGAAGGTGGGTTTTGGAAATGTCCTTTCGGACTTCAAGTCACGGACTGAGACTTGGAGTAATCCGATGTGGGGAACACGCTGCCTAACTGTTGCTCAGAGCTCAGAGTTTGACCGGAACTGTGGACGCCCTGGACCTGGAGTTGTACAAACGCCGAGTGGTGCTCACGATGGTGCTTGCTGCTGGACTAGCAAGCTTCATGTCCTGTTTCTCTGGGGTGTGTGTGTGTGTGTGTGTGTGGTGTTGTTTCTTATTTCGTTTAAAGTATATTCTGCTTATATAGAGAGTCTCCAAGACTAAAATTCACAACTTGAAAAGTATTCTGAGGAATATTCTGAAAACAGGGCAACGTGGACAAGTTAAGATTTCCACTTAATTGGACTTCACACTCTGGAAAAAAAAAAAAGAAAAGAAAAAAAAAATAACCACAAAACCTTGTTGCCCTACACACTCTGTCAACCTCGTCATTTTTGGTGCTAGCCGAACAAGTCCTCGGGAGCCTCAGGTCTGCTCTTGGGGAATCAGCACGTGTGTTTCTGGTAGAAACCTAAGAGGAGACAAAGAGCAAAACAGTCCCGTTTGGAAGGACAGGAAAACGCCACTCATGGTGCTCCCCACGTATTATCAGAGATGCTTGGAAGATTAGAGGCCACTTGTGGGTTTTTCCTTAGCAACTGACATATTTAAATTTGCCCTAGGATTTGGTTAACAAGGGGAAAGTCACGGTGGCAATTGAGAAATCCATCCATCTTCTCACTATGTGAATATTAATAAATTGTAATATGCCAGGACACTTCAACAAACGAGTGTTTTGTAATCTTTCAGATGATATTTTCAGTCTTCAGAAGCCAGCTGTTGGTAGGCACTAATGAGCTTACAACTGTTCTCCATGGGAAAAACACCACATCATTTTGCCAAAACCAAAGTAACTTACAAGACAGTGTCCTTCTGTAGTTTTTTGAGATGTGGTTATAAAGGGCATATTTATATAATTCTACTCTGTTCCTCAATGTCTTTGATGAATGTAACCCAATTTTACTGCTTTTAAAAGTCCCAATTCAAACAGGGATTTGCCCGCTCAGCATAACCAACCAGACAGTGGTTTGTTAAATTTAGAGCGTCCTTTATTCCATTCTAATTAAAATCATACATTCTCAAATCTCAGAGAAATAATGATTAGAATATTCTGTCTCCTGGACTTGGCCTAGAATAGTGGCCATTTTATCATAAAAATAAATATAGGCCTCCATATCACTACCCTCTTACCCTCTGAAAAAAATTTCAACTTGTTTCTTTATATAATTATCATTTTTATTATGTTATGGAAAATTAATTTATTAATAGCCTATTCTTATGTGTTCTCACTTGCTTCTTTGAGGAAGTGAATTAATTCTGAGGAAAAGTGTTGAATAAATAAACATGGGTTATAGAGAAAAGTCAAAATATATGTGTAATATTTAATTATTTTATAAGTTTTATAATAAAGTGTTCTGTTTCTTTGC EMBV3_24466 CGCGCCTACGCTACGGAGCCGCACGCCAAGGACTTGTGCCGACAGCTCCACGCTCGTGTG Variant GeneID:511094|TNNI3:NM_001040517:157_cdna 264^437 3 EMBV3_42812 GeneID:511094 18 GENE TNNI3 NULL troponin I type 3 (cardiac) EMBV3_02586 TCACCAGCTGGATGGTCACCAGTTGCTAAAAATGCAGCAGACTAAGGCGAAACGTTTGGG Gene BVT0102_270703 + 1 EMBV3_19989 GK000018.2:47360239-47382726 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40660 ATGATGAGTGTTCAACCACAGCTTCTCTGTAGCTTCTTCCTTCTTCCGACTTCCCTGCAG Gene BVT0102_208585 - 1 EMBV3_11532 GK000013.2:82402818-82651609 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044213 TCONS_00044212 1 XLOC_026151 NonCoding TCONS_00044212 XLOC_026151 NonCoding NonCoding - 13:82423491-82478186 - TSS32549 1760 4 TCONS_00044212_5 54 0.18125 3 0.967875818188467 4.57195215852323e-09 3.34914935092127e-09 4.67336866545957e-05 2.61984156636358e-09 1.84113374330074e-10 1.15497110978867e-09 0.000205293125916071 1.56127417098183e-08 0.000139693330161545 1.34966326484411e-09 7.54556339576185e-10 0 0 1.53163280991176e-09 2.9629056534646e-05 0 0 0 2.38672105808773e-09 0.000233846771138593 0.00103536156766711 0 2.95963161306871e-09 0 0 2.13508067754395e-09 2.94625961348116e-05 0 0 0 0 noncoding GAGGGGGGTGGGGCAGGCTGCTTAGAAACGGTGACGTGTGAGGCCTGCAGGGAAGTCGGAAGAAGGAAGAAGCTACAGAGAAGCTGTGGTTGAACATTCATCATTCACTGAGCGTTATTACCAATGATCACACCGTACATTCACCAGCAAGCCCAGAAATGAACAGTCAGATGAGGAACCTGAGGCACAGAAGAGCCAGTAACTGGTCCGACTGCAGAGAGCCAAGAAGGGGCCGTAACTGTAAACTGAAGTCATGGACTAGTCATTCATCATCGGCTTTGGCTCAGTGACTTGAAACTGAAGGCTCAAGAGAAACAAAAGCACTGATTGTGCAGAGGTGGCCGGACACCCAGAGCCTCAGTGAAACCGACCAAAGAAGAAAGAAGTCGGACCTCATCTGTGTAGAACTTCTGCAGAGATAATTTGCGTTTTAAAAGTAGCTTCTTTTCCACTGAGACTTCTATTTTGGAAATGTATTATGGGCGCTTTTTCATCTGTTGATCTGCTAAATCTTCATTTAACAATCATAGAATGGTGTTTAATGACAATAAGACCGTTGCTTTCTCTAATAAGAGTTATTTTAATTTATGAGGATTCTGTAAATGTGTTCTAATGCTAGTAATTTGGTGTTTGAAAGTGGGGTTGTTAAACTAATGGATAAGTAGCAAACCTGAATTTGCCAGCAAACATTATTTTTAGACACAAAAAGCCTTCTTGAGAATGAAGCCAATCCTAGCAAAGTAGAACCTGCAGATTGATAGTACTTGCTCACATAATTTAAGCCTCTGAATACAGCTATACCTGAAGCTGACTATTTCTCACCACATGAGCCAATATATTCCAGCTTTTTCTTAGGCAATTTTGAGCCAGATTTCTGTTACTTGCTATCAAGAGCTCTTATTAATGTATTTCCCCAACACATAACCTGCTTCTGTCATTTTTCACACTGAAGTTATCTAATTCAGTCTAAAAAGTGAAATTTCCAGGGGAAAAAAGATGTTGCTTATGTGTCCTTCCATTACTTAAAAGATCCATCTGGAGTTTATTTTAAATAATACACATATCTTTCATTAATACTTAAAATAATGCTGTATGCTTTCAGCATTATGTAATGCAAACAGAACCAAGATTATTACTTAATACAGCTGCTGAATTTGTCTATTTACTTACTAGTTTAGCTGTTTCTCTCCCTACCTGTTTTCCTAAGACACTGTCATATTACAGCAAACATTTAAGATACAAGGGTGAAGAAAAATAGCAAAACCTAAAAGCCTGTGGTAAGATGAAGCCAGAAGAAATGCAAAAAAAAGCCCTACCACATACTGATCTATATGCTTACTCAACTATTATTATTGATCTATACCCTCACAAAGTTTGTGGCTGAGGCACAAGTTGGGCTCTGAGCTTCCAGCAGGCAATGAGAAAACAGAAACAGATTCCTGGCCTTCGTTTAAAGATTACTCAGTGTGTCCAGGGGTTTCTATGTGTCTTTTTCTAGTAGAGGATGCAAAAATTTCACTTAAATGCTGTTTCTCAAGAAGATGAGAAGGTGGTATCACAAATCCGGTTCAGCGCACATGGGTATTTAAGTGAGATTTTCTGTATTCTCTTAATGGAACGTGATGCGGTCCCACAGCCCCCTTCTGCTGACCTCTTGAAAATACCTTGAAGAACAGGTGGACAAACTGGGATTCACGCGTGTCTTTGCTGAATATTATTATCTTGGCAGCTTTTTAATAAATACATTTGTAACAGGCTGT TCONS_00044204 TCONS_00044205 TCONS_00044206 TCONS_00044207 TCONS_00044208 TCONS_00044209 TCONS_00044210 s 3' 20673 TCONS_00044204 TCONS_00044205 TCONS_00044206 TCONS_00044207 TCONS_00044208 TCONS_00044209 TCONS_00044210 s 3' 20673 EMBV3_22159 AACCTAGCCCACGCTCTGCTCATGATCGCCCAGCACACCTTCCAGAACGTCTTCATCATT Gene GeneID:527835|OTOP2:XM_002696185:181_cdna Constitutive 0 NULL GeneID:527835 19 GENE OTOP2 NULL otopetrin 2 EMBV3_14593 TTCTTGGACAAGCAGGCTCGCTGCCATTACCTGAAGGGCAAACTAAGGCACCTCAAGACA Gene GeneID:615639|OCEL1:XM_002688546:165_cdna Constitutive 2 NULL GeneID:615639 7 GENE OCEL1 MGC151989 occludin/ELL domain containing 1 EMBV3_28716 GGGCTCTGCTGCTGGTGGCTTTCTCTGTGGGTCGTGAGCTGCCTCAGCACCGCCGTTCTG Variant GeneID:506954|TLCD2:XM_002695684:222_cdna 365^447 1 EMBV3_14475 GeneID:506954 19 GENE TLCD2 NULL TLC domain containing 2 EMBV3_42721 CCTGGAATTGCTACATTCGTGGAATTGCTGGCTCAGTGGGAACTCTGTGTTTAACTTTCT Gene BVV0102_168452 - 1 EMBV3_24684 GK000011.2:19445399-19462108 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07774 ACTCAGGAATTGATTGGGGTCTCCTGCATTGGAGACAGATTCTTAACCAGCTGAGGTGTC Gene BVV0102_300053 - 1 EMBV3_17461 GK000030.2:68305522-68428001 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17144 GGATGGAAAGTGGCAGAACGTTCATTTTCATCGCTCGGGGTCGCCAACAGTACCCATCAA Gene GeneID:532713|CAMK2D:NM_001046333:56_cdna UTR3_Alt 2 NULL GeneID:532713 6 GENE CAMK2D MGC128576 calcium/calmodulin-dependent protein kinase II delta EMBV3_35178 TCGCACCTGGAACATTACAACAAGTGCTCAACTATCACATCCAGGGAGATCCAGACCGCC Gene GeneID:526064|LOC526064:XM_002688066:13_cdna Constitutive 0 NULL GeneID:526064 6 GENE LOC526064 NULL similar to histone cluster 1, H2bl EMBV3_19022 AAGGAAAACACTGGCCTAAAGGACAGGAATGCAGATTGGGCAATTGACTGCTCGTGCCAG Gene BVT0102_403877 + 1 EMBV3_22523 GK000022.2:32286399-32471629 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05029 TGCTGCAGAGGGTGTGGAGAAAAAGGAACCCTCCTATGCTGTCGGTGGGAATGTAAATTG Gene BVV0102_176659 + 1 EMBV3_34042 GK000003.2:3319167-3425058 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175128 1 XLOC_104911 NonCoding TCONS_00175128 XLOC_104911 NonCoding NonCoding - 3:3416236-3417286 - TSS129887 1050 4 TCONS_00175128_1 37 0.54952380952381 1 0 0.000738595683430427 0.000344517305220234 0.000370160568881175 7.90871626477413e-06 2.82124796295098e-05 0.000173742837793668 6.10941195280603e-05 9.57620426960938e-05 0.00101444546065487 0 0 0 2.73265187193709e-06 0 0.000182230388416649 0 0 0 0.000266348966261357 0.00038696693361478 5.49322777298803e-05 0 0 0 0.00316070439771365 0.000543508281910788 6.13815681234901e-05 0 0 0 XR_232761.1 LOC786451 PREDICTED: Bos taurus F-box only protein 16-like (LOC786451), 1e-63 248 80.59 0.257142857142857 XR_246212.1 PGBD2 PREDICTED: Homo sapiens piggyBac transposable element derived 2 (PGBD2), transcript variant X2, misc_RNA. 2e-29 134 78.98 0.148571428571429 0 noncoding 0 0 0 0 -0.160932666395094 0.193560358266344 0.00138496089861244 0.979546935338089 ACTGATGCTGAAGCTGAAGCTCCAATCCTTTGGCCACCTGATGCGAAGAGCTGACTCATTGGAAAAGACACTGATGCTGGGAAAGACTGAGGCAAAAGGACAAGGGGGAAGCAGATGATAAGAAGGTTAGATAGCATCACCGACTCAATGGACATGAGTCTGAGCAAACTCTGGGAGACAATGGAGGTCAGAGGAGAGAGTTGAGTCCTGGTGACCTACCATCCATGGGGTTGCAAACAGTTGGAGACGACTGAATGACTGAGCAACAACATCAAGTATTCCATTGTATATATGTACTACATCTTCTTTATCCGTTTCTTTCAGTGGACATTTGGGTTGCTTCCATGTTTTGGATGCTGTAAAACATGGCTGTGAACATTGGGGTGCGTGTATCTTTCCGAACTACAGTTTTCTCCAGGCACATGCTCAGGAGTGGCATTGCTGGATCACACGGTAGCTCTATTTTTAATTTTTGAGGAGCCTCCACACTTCTCTCCATAGCGGCTGCACCAATTTACATTCCCACCGACAGCATAGGAGGGTTCCTTTTTCTCCACACCCTCTGCAGCATTTATAATTTGTAGACTTTTTGTTGACCTTTTGGACCAAGTGCTAACCTCTTTCAATGTTAGTTTTCTTATTCATCCAACGGGGGACTAATTTCCTTCAAAGTTGTGGCAAGGCTTTGTGAGTTGGTTATTAGATGCTGCTCTGTGTCCAGACGTCTCCTGCTCAGGTGGGCCCTGTGTTTGAGGAAGTGTGAGGTGCTGGGTGGAGTCGTGTACACTGTTCCCAGAACGTGCCCTCAGCCCTGTTGTGGTCTTGACATCTCAGAGACAGCCGCTCTTGTAGATGAAGCAGAGGGTTCTTCCCACAGCCAGGGTTTGGTCTGCTCATTCTCAAAGACCTGGCAGGAAGAGGAACTCCAACAGGAGTGGGTGGGCACTGGGAGGGTGATGAGACACTGATCCACAGTTTTACCCCTTTGTAAATCTCAGGCACACAGGTTAAATTACTCATATCTCTCAATAAATTGAACCTCACCATCAT TCONS_00171774 . 3' 7618 TCONS_00171774 . 3' 8667 EMBV3_40555 GGACATGTACAGGCCTCTCAACGCCACACGCAAGAAAAACATGGCACAGAAGCTACATGA Gene GeneID:614269|LOC614269:XM_002696083:36_cdna Constitutive 0 NULL GeneID:614269 19 GENE LOC614269 NULL similar to leucine rich repeat containing 37A EMBV3_25554 TCATGTCCACACTCTGGGTCCTCACTTTGACTCTGCACCCTTCCTGGGGCTCTATTCTCT Gene BVT0102_157573 - 1 EMBV3_05570 GK000030.2:118607669-118633275 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36751 TGGGCCGGATCAAGGACACAGTTGACCTCGTGGCGAAAAACAACACGTTCCTCTGGTTTA Gene GeneID:513067|ARSG:NM_001101967:16_cdna Constitutive 0 NULL GeneID:513067 19 GENE ARSG MGC142904 arylsulfatase G EMBV3_04331 GGCGCCAGTGGTAAAGAACTCTCCTGCCAACACAGAAGGTCTAAGAGACAAGGGTTCATT Gene BVT0102_226285 + 1 EMBV3_13013 GK000006.2:108849732-108851269 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40875 TCGAGAGCTATTTTGTATCTGCATTCAGATAGCAGCTACTTCTGAGATTTGTGAGGACAC Gene GeneID:529412|FAM26D:NM_001101133:19_cdna Constitutive 2 NULL GeneID:529412 9 GENE FAM26D NULL hypothetical protein LOC529412 EMBV3_13040 TGCCCTCGGCGTGCCTGAGCGAGTGACTAAAGACGGGGGAAAGGAGCTAGTAGGGTCCTA Gene GeneID:100335386|LOC100335386:XM_002696181:169_cdna Constitutive 0 NULL GeneID:100335386 19 GENE LOC100335386 NULL hypothetical protein LOC100335386 EMBV3_10572 CAGTGACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCATGTAGTCAC Gene GeneID:791051|MIR10B:NR_030976:58_cdna Constitutive 0 NULL GeneID:791051 2 GENE MIR10B MIRN10B bta-mir-10b microRNA mir-10b EMBV3_38443 GATGAGGAAAAGAGAGGACGAAATAGATACCCAGAGACCATGGGGTACACACCTGCTTCC Gene GeneID:538783|TBXA2R:NM_001167919:63_cdna Constitutive 0 NULL GeneID:538783 7 GENE TBXA2R NULL thromboxane A2 receptor EMBV3_25998 ATGAGTGGACAGCTCAGCAGAGCACGCTTCCTTCAGAAGACAGGCAACCAGCAGAATAAA Gene GeneID:767847|PMPCA:NM_001076964:223_cdna Constitutive 3 NULL GeneID:767847 11 GENE PMPCA MGC139568 peptidase (mitochondrial processing) alpha EMBV3_30785 TTCCAAGAAAGGTCAATTCCCAGGTGCTTACCGGACAGCCTTCGAGAGGAAAAGACTAGG Gene BVT0102_328492 + 0 NULL GK000019.2:25013744-25075515 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42248 TCCCTCACATTTCTCTCCACCTGAATTCATTAGACTAATTGTACATGTCTGTCCGTGCCG Gene GeneID:617091|ENC1:NM_001078067:172_cdna Constitutive 2 NULL GeneID:617091 20 GENE ENC1 MGC139340 ectodermal-neural cortex (with BTB-like domain) EMBV3_07011 TCCTGAGCTCCTTTACAAATGAGAAAACTGAGTCTGGAGAGGAAAGGGGGCTTGGCTCTC Gene GeneID:522670|RELB:XM_002695167:788_cdna Constitutive 0 NULL GeneID:522670 18 GENE RELB NULL v-rel reticuloendotheliosis viral oncogene homolog B EMBV3_07468 GGACAGACTTATCTTAATACAGTGGAGGCTTATGATCCCCAGACAAATGAGTGGACCCAG Gene GeneID:528668|KLHL5:XM_002688227:141_cdna UTR3_Alt 1 NULL GeneID:528668 6 GENE KLHL5 NULL kelch-like 5 (Drosophila) EMBV3_13534 CTAGAGTGACAGTAGCAGAATAGGATAAAAAAAGAAACTTTCTGTTCCAAAAGCTGCAAC Gene GeneID:767889|ACYP2:NM_001113230:182_cdna Constitutive 0 NULL GeneID:767889 11 GENE ACYP2 NULL acylphosphatase 2, muscle type EMBV3_23003 AGATGTGAGGCGATTCCTTTTACAAGCAACCTGGTGTGGAATTGATTTAGAGCACAGGGC Gene GeneID:536891|FKTN:XM_002689900:36_cdna Constitutive 1 NULL GeneID:536891 8 GENE FKTN NULL fukutin EMBV3_15043 GCTGCTCAAGGAAAGACCTGTGCTATAATTAAGGTTGGATGTTGTGTATACGTTCCTGAC Gene BVT0102_123200 - 1 EMBV3_29414 GK000026.2:16065396-16130564 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093072 TCONS_00045931 TCONS_00093070 TCONS_00018347 TCONS_00045930 3 XLOC_057069 XLOC_026577 XLOC_009226 Coding TCONS_00093072 XLOC_057069 Coding Coding - 19:27853855-27856608 - TSS69911 1731 2 TCONS_00093072_3 82 0.072790294627383 2 0.371729651162791 0 0 5.91368272090608e-07 0 0 0 1.08126597381201e-06 2.87836045486989e-06 0 2.25696264238067e-06 2.64426428042002e-06 0 5.8007840470986e-06 2.15006486397557e-06 1.7309372930244e-06 0.0125274312710102 0.00198850395976557 0.00183160064924496 9.18556903866162e-07 0 1.4216773564612e-06 0.00144760219803516 0.00205567987657679 0.00361050481177587 1.49898569784583e-06 1.01535961135092e-06 0 0.000208081888987826 4.59726727916134e-05 0.000552539791974356 XR_228658.1 LOC101902546 PREDICTED: Bos taurus uncharacterized LOC101902546 (LOC101902546), 0.0 2266 100.00 0.725014442518775 TCONS_00093072_3 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 7e-21 87.0 52.00 0.902439024390244 1 noncoding AGTTAAAGTTGCAGGTATTGTCCCTTGGATCCATCATACGAGGGTGAAGAGAACATATCACGCAGACCCAAAAAACGCTGAGTGGACTGCACAGAGCGACCCCACTGGCCCTCGAGAGACTAAGACCATCCTTAAGAAGAAGGAAAAAAAGATCCTGGACCAGCCCCTTCAGGATGAAGCCGCACAATCAACTCCTGCTGCTTGGCCTCATCAACATGATTTTGAATTTAACTTCCGTTCAACTCAGGACAATGTTTTCCTCTCATGGGCACGTTCATACACAGACTTCCACAGCACTTCTAACTGCTGGGTATGTAGGGCTATGCCTCTGTCAGTGATGGATGGACTTCCTTGGTGGGTGTCACCGCTCTGCCAAGGACATTTTAAACCACTCTGCTCTTTTCTGGGATGACAAAAAGAGACTTTCCTCTCTCTTGTCAATCATAACCTCTCCTTGCTCTCCTGGTGTAAGACCTACAGTCAATAGACTCGGGTCATGGGGTTACATTTGATATAAATTCCAGTGTAACAAAAGCCTAACCTACAACAAGCCCCGGTAAATCTACCTTATTTACATGCTAGGTGGACAAGATCCGTGTTTCAGTGGTATGAGTATATTACTGCCTTATTCGTACCCTCTCTAGGGACAACAGATATCATGATTAAAGTAGAGGCCTTCACTAATTTCACAAAACAGGCCCTCCTAGATAGAACAAAAGCCATCCAAGCCTTAAATGAAAAGCAAATCCAAATGAGAAAAGTGGTAATTCATAATAGAATGGCTTTGGACATACTCACAGCTGCTCAAGGAAGGACCTGTGCTATAATTAAGGTTGGATGTTGTGTATACGTTCCTGACTTATCTGGCAATGTATCGACTGCTTTAGATGACATGAAAACCAGGTAAAAGCAATGTCAAACGAAAACATTCCTTTCTGGACTTTGGTCCTATCTTGGGTGAAGGGAGACTGGTGGAAAACTATTGTAACTGTTGTTATAGTAATCTTAATCACACTGCTTTGTGGGCCCTGCTTCTTACAATGCCTTGTGAATTTTGTAACCCAGAGGTTGATGGCGTTCTCTTATGTGGGTGGCCGAAGGACTAAGGTGTAATATATCTCAATGAATATCGCTCGTTATAGAAACTAAGGGCATCAAGAGGGGGGAATGAAGAAGGAATTCATAGGGCCTGGACCCCATCTTAGGCCTGTTCATGCTGATCATGCTCGGCCACCACTCCAGTGGACTCAGGGCTCTGGGCTTAGTGCCTATGGAAACTACCCGCTCTGGACAGGGGAATCTTGAAGATCACATCCAGGTTACTCATCGCCTAAGAGAAAACATACTCTAATCACCCCTGCCTCTGGACAGGTCATAAATTCTTTCTGTATCTATCAGGGTGTAACCGTAGGCTTATTGATTATTAACTGTTTGAACACCTAACACTTGAATGATGGGGTTATTGTGATTGTATTTATCCTTCCTTTGTTTTATGTAAGTCTCAAGGAAATTGGGGTGGTGGGTTTGGACACGTACACATGGGGTATAAAAGATTTTCACAAATGCTGGTCGGGGTCCTTGGCTAAGACCAGACTCTGCCTTGGGCCCACCAGGGTAATAAACTGCACTCCACTATCTGCATTGTTCTTCTGAGTGAGTTTGTTTCCCGGAATGCATGGCTATAACACCGACAGCTCTGCTCAGACTCAGGATGACCCCACAGTCCCAAGG TCONS_00093073 s 5' 4352 TCONS_00093073 s 5' 7104 EMBV3_38750 ATGTACCGCAGAGGGTACTGGGAGGACATTGCCTGGGTCAGCACCTTTTATATCCGCTAT Gene GeneID:521081|LOC521081:XM_002693705:389_cdna Constitutive 0 NULL GeneID:521081 15 GENE LOC521081 NULL similar to rCG26407 EMBV3_36629 GGTGTCCACAGAGGATGTGGCACCCAGCCCACGCCGTGCTCCGGGACCTCGTACCCTTCC Gene BVT0102_436773 + 1 EMBV3_31588 GK000021.2:71167981-71186920 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125728 1 XLOC_077270 NonCoding TCONS_00125728 XLOC_077270 NonCoding NonCoding - 21:71184944-71186076 - TSS94487 1132 2 TCONS_00125728_3 98 1 0 0 0 0 0 0 3.15994318226573e-06 0 0 0 0.000156292735899673 6.06672824592775e-06 0.000219532066519232 5.06938832581738e-06 0.000403080374413269 4.76750995964415e-05 0.00041997196430865 0 0 0 0 0 0.0017502809724081 0.000316068087223162 0.000118478042331942 0 0 0 0.000144247642541441 8.57704314585516e-05 8.49787094804806e-05 XM_005222337.1 BRF1 PREDICTED: Bos taurus BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit (BRF1), transcript variant X1, 0.0 2039 100.00 0.997349823321555 0 noncoding 0 0 0 0 0.0809973501084677 0.591460280160832 0.0089978503386656 0.892406975111625 GCTTGCGACTCCAAAGGCAGCCTTTATTGCGCAGGGAGCAGCGTCCCCAGGGTCTGTGCTGGGCCCCACCTGGGGCCTGGGAGGCGGAAGCAGGACACTGGCCTGGCAGCCTGAGGGTGCCCGGGCGGAGGTGGCCATGGGGCTGGGCCCCTTGAGGCAGGGTGGGTAAGTCCGCCCCCCGGTGACCTGGGGCCTTCAGGGCAGCCCCAGCCTGGGGACGGGGAACTTCCTTGCCCTCCCGGGGCCCCCTCAGCCCAGAAGGGACAGGAGTCCCTCTCCCGGTCCCAGACTCGTGGCCCTCACTTGGCCAGCGCTCCAGCCCGCCAAGGAACAGATGGAGGACCAGGGTGTGGAGACAGCAGAGGGGTTCAGGGAGGGCGAGCGCTGAACAGAAGGAGGGCATCGGCCTGGGGCGGGAAGACAGGGAGGGTTGGTCTGCACCTCGCCCAGTGCTGAGCCGTGGGAGCAGCATTTGTGGGGCTGCCAGTGGGCAGGGCACAGTGGGCGCTCAGGCTGGGCTCTACCAGAGAGGGTGTCAGGGACCCTGGTTCTCAGGGGCCCCCCAGAAGCCGCCCCTCCTTCAGAGAGACCCCCCAGCGCCAGCAGGGGCCATGGTGGCAGAAGGCAGCCACCAGCCCTACTGCCCGTCTGGAGGCCTGGCCCAGCTGGACATGACTGTGGGAGCCAGGAGAGCGTGGGGAGCCACTGGGAGAGGGGCAGGAATGCAGGCCGGGGCCCGGACAAGCTGGCTCAGGATGGGGCTCCTTGCCACCTGCAGGCACTGGGGGCGTCTCAGGCCTTTTCCCCCTTCTTGGGGGGCCTGAGGCAGCGAGTGGCATGACGCCATGGCCCATCCAGTCCCGCCAGGAAGGGCGCCCATGGTCCCGACTCCGTGGACCAGAGGGGCGGGAAGGGTACGAGGTCCCGGAGCACGGCGTGGGCTGGGTGCCACATCCTCTGTGGACACCCCGCGGCACCTCCAGGCCTCGGGCCCCTGAGCTCAGCCCCGCTGGGGGCAGACCTGGGTCTCGTCAGAGCCCGGGATCCGGTGCCCTGATGGTGCCCCAGGGACCCGGGTGGAGCAGCGTGAGCAGCAGTGGCGTGTCCGTGCACAGGTGTGCACTGTGGGTGT TCONS_00121993 TCONS_00121994 . 5' 16965 TCONS_00121993 TCONS_00121994 . 5' 16965 EMBV3_22938 GAGATTACTCAGGTTTGAGATATTTTTCTTGGCACGGGATAAATAGATTACTGCTCAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14149 AGATTACCCAAACGCAGAGAGTTCCAGAAAAAGCCCCGCCTCACGCTTTGCTGAAGTCCA Gene BVT0102_091736 + 0 NULL GK000029.2:45824956-45844925 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22566 CCGTTTCAGGAGCCCTGCCGGTGTTTGCAGAAATGGTCCTTGGAGCTTTGAGTTTCAGAT Gene GeneID:539480|TOLLIP:NM_001039961:10_cdna Constitutive 0 NULL GeneID:539480 29 GENE TOLLIP MGC139368 toll interacting protein EMBV3_38646 TGGAATGTACTGCTTTTGGCCAACCTTCCCAGGTGTGCTCAGGAGGCTGGAGAACTATGT Gene GeneID:616063|LOC616063:XM_002696535:182_cdna Constitutive 0 NULL GeneID:616063 21 GENE LOC616063 NULL similar to myeloid-associated differentiation marker EMBV3_02870 GGCATGTGGTACGGGGTGGACATCAACACTGAGGACATTGCTGACAACTTTGAGGCCTTT Gene GeneID:514355|CCT7:NM_001046171:10_cdna Constitutive 1 NULL GeneID:514355 11 GENE CCT7 CCT-ETA MGC133783 TCP-1-ETA chaperonin containing TCP1, subunit 7 (eta) EMBV3_32178 GCGTATGTAAAAGACCGGAAGTGGATGGAGAGAAATACCAGAAAGGAACCAGAGTCCGGC Gene GeneID:535290|MRPS28:NM_001046401:46_cdna Constitutive 0 NULL GeneID:535290 14 GENE MRPS28 MGC137258 mitochondrial ribosomal protein S28 EMBV3_07758 AGCACTGGTACCGTTTTATGTTCCCACCGGCGATGTCTCCACATCTTTGCTACCACTTAG Gene BVT0102_365109 + 1 EMBV3_23983 GK000002.2:130478327-130498485 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104027 1 XLOC_062273 Coding TCONS_00104027 XLOC_062273 Coding Coding LACTBL1 2:130463267-130479463 j TSS77122 3376 1 TCONS_00104027_7 547 0.345082938388626 6 0.791911083667799 0.000439281735282078 0.000345336330907632 0.00069075816651064 0.000209079208407944 3.65607660135486e-05 0.00010345771672619 0.000290202902041312 0.000106287161504317 0.000198655682398776 0 8.80143958348297e-11 0 9.20730772452159e-07 1.75463517599235e-10 4.90474492385453e-06 0 3.32557828632458e-13 0 0.000244269673091318 0.000406861123351375 0.000415434264931475 0 0 0 0.000416612121589829 0.000526949739875914 0.00023052930663657 0 0 4.25636894471916e-11 XM_002685780.2 LACTBL1 PREDICTED: Bos taurus lactamase, beta-like 1 (LACTBL1), mRNA. 0.0 5157 100.00 0.846563981042654 XM_003846622.1 LACTBL1 PREDICTED: Homo sapiens lactamase, beta-like 1 (LACTBL1), mRNA. 0.0 2235 88.59 0.513625592417062 TCONS_00104027_7 sp|A8MY62|BLML_HUMAN BLML_HUMAN Putative beta-lactamase-like 1; 0.0 859 86.65 0.943327239488117 1 coding 0 0 0 0 0.00916272496288523 0.937807896500523 -0.00994545574380796 0.882836527791306 GTGGCATTTCAGCTGGTCTTAGATATCTCGCTAAATACATAGGAGAGAGGGGGCATGCCCAGCAGAGGAAACAGGCGAGGCACAGGCATGGAGGTCTGTGGGGCAGAACTGTCGGAGGGGCCGAACTGGGGAGGTGCTTGGTTTTACAGGTGCGAAACTCACCCCAAGCTGTAGGCTCACCTGATGTCTGGGTGGACCTAAGGTATAGGACTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATAGCTGGATGCTATCACTGACTCAATGGACGTAAGTTTCGGTAGACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGCGCTGTGGTTCACAGGGTTGCAAAGAGTCGGACATGACTGAGCAACTGAACTGAACTGAAGGCATAGGAAGGGCCAGGCCGGGGGAGTCCCTCTCTCCTCCCTGTTGCTGACCTCCTGTGTGGGCCTGATTTGCCCTTCCCTTTCCAGGCTGGCCGGCAGCTCAGTCTGCTGAAGGTGAAGAAGAAGTGGCTCTTGCCGGCTTCCTGCAGCTTTTTCTTCGTGCTCTCTGCGCTCATGACTGGCTGCTTCCTTTGGCAGTATTACCTCCCGAAGCTGAAGAGCGGTTCCTTGGGACCAGAGGTGACCTCTGCCCCCGTGAGGATGTGTCCCCAGCACCCTGAGCCTGTGCCCCTGGCCCACCCCCTCCCCGTGTTGAAGGAGGCCCTGGAAAAGGTGGGCCGGATCCTCCGCCAGGCCCTGTCTGCCCCGGGCCTGGCTGCCATGTCTGCAGTTGTCATCCACAATGACACCGTGCTCTGGACTGGGAACTTTGGGAAGAAGAATGGTTCAGACCCAGCTTCTGGGCCCCCCAACGAGTACACCATGTACCGAATCTCCAGTGTCTCCAAGATCTTTCCTGTCCTGATGCTGTACCGCCTATGGGAAGAGGGCATCGTGGCCTCTCTAGATGACCCTCTGGAGCGGTATGCCAGCGCTTTCACCATTAACAACCCATTGGGTATGGCATCAGCCTCCCAACAAAGGAGTCTGGTGGATGGGCTGGAGGAGGTGGGCCCAGCCCCAAGGCCTTCACCCGTCACCCTCCGAAGGATGGCCAGCCAGCTGTCAGGGCTGCCCCGAAGGCTCCGCTCCACTTCGCTGTTGTGGAGGGGCAGCACCCAGGAGGCCCTGAGCCTGCTCAAGGACGATGTGCTGGTGGCGGATCCAGGAACCAGGTGCCACTATAGCACGCTGGCCTTCTCGCTTCTGGCCCACGTCCTGGCAGCCCACACCGTCCAGGGTGACTACCAGCGCTGGATCTTGGAGAAGGTGCTGGAGCCATTGGGAATGGCAGACACGGGCTTCGACCTGACGCCTCCTGTGCGTGCCCGGTTGGCAGTGGGCTTTTATGGCAGTGGGCGGCTGGCACCTCTGTACGACCTGGGCTGGTACCGGCCGTCGGGCCAGATGTACTCCACCACCGCTGACCTGGCCAAGCTGGCCATGGTGCTCCTGGGAGGTGGGCCCCAGCGGCTCCTACGGCCAGACGCGTCCAAGACGCTGCTGGCGCCACTGCTGGCCTGCCCGGGCGCCTACTTCGCCAACGAGACGGGCACGCCATGGGAGTTCCACGCGCAGCGCGGCTACCGCGTGGTGCGCAAGGACGGCGAGCTGGACGGCTACGCTGCCACCTTCTCCCTGGTGCCGCCGCTGCGCCTGGGTCTCACGCTGCTCCTGGCCGGGCCGCGGCCGCCCGGGCCTGACCTCGTGGCGCAGGCCTACGACGTGCTGCTGCCGGCCATGGAGAGGGCCCTGCGGGGGGCCGAGCTCAGCCCGGCGCCGCCGCCCAGCACGCGCCCCTTCACCGGCTACTTCACCTTCTCTAACTTGACCTTCTACGACGTGCGCCCCGGGCCGGCGGGCGAGCTGCGCCTGCGCCAGTTCGGGCCCCGCGTGGAGGCGCTGGTGCCCGCCGCGTTCCGCACGCTCACGCTGCGCCACGTGCGCGGCCGCGTCTTCCAGCTGCACGTGGCCCGCGAGTTCCCGTGCGCCCTGCCGCTCGGCGACTCCTGGCTGTCCCTGGAGGCCCAGCACGGGCAGCTGGTCAACTTCTACCCCTTGGACCGCCACGGGCTGTCCCCGGGCTTCGACGTGCCGGGCCTCAACACGTACAGGGTGTTGCGGCTGTCGCACAAGCCGGTGTTCAAGACCCAGTGACCCTGGACTCCGTTTTCCCTGCTGTTGCCTCCCAGCTGTCCAACCTAGTTTTGCAAAGTAAGGCTGCATGAAGGTTTGCTGGAGAACCTGAGGAGTTGGCAGCGTGGGGTAGGGCAGTGCCCCTCAACGTTGTGGTTCGTGGACCACCGCCGCTCGCCAGCTGTTAAGTTATCCGTGGGAGAGGAAGAGTTAGGTAAGCATTTAGAAACTGTAATAGCGAGTTGACAGAGTACTTTTGTGTGTGTGTGGAATCTGAGACAGAGTATCATTGTATCTTTTAAAAATCAACCTTATAGAGTTATACTTTTATGTAAAAGGAAATGAACACATTACCAGGGCACAGTTTGATTTTGACAGATATGTATACCCTTCCCCACAGTCAAGATAATAGAAAATTTTCATCACTCGCCCAAACATCCCTCCTGCTGCTTTGCAGCCAGCTTCCTTCCCTGCTCCCAGCCCTGGGCAACTACTGATCGACTCTGTCACTTTACATTAGTTTTAGCCTGGAATTTCGTGTAAGTGGAATCGCAGAGGGTACTCTTTCGTGTCTGCCTGCTTTCGCTCAGCAGGATGTGTTCGAGGTTCATTCATGTCTTTGTGTATATCAATATTTTGCTTTTTTCATTGCTGAATGGTGTTGGGTTGTACAGATATGCCACAATTGGTTTATCCTTTCATCTTTCGATGGGTATTTGGGTTGTTTCTAGATTGGGGCTTTATGAAACAGCATTCCTGTATAAGTCTGTTTTTGTGAATACATGGTTTCGTATCTCTTGGGTAAATACCTAGGTGTGACTGCCATGCAGTTTTATAAAGCACTGGTACCGTTTTATGTTCCCACCGGCGATGTCTCCACATCTTTGCTACCACTTAGCACTGTCAGCCTTTTCAGTCTTAGTCACGCTAGTGGTAGTAGCTGTGAAGTCTTCTCTCACCGTAGTTTTAATTGCATTGTATTTATCACATTGTAAAAGTTCTCTAAATGTTGTGGATAGAAGTCCTTTGTCAGATACAAATATTGCAAAGATTTCCTCCCAGTCTTTGGCTTGCGTTTTCCTTTTCTTAATGATGTCTTTTGAAGAGCAGAAGTTATAAAATTTTAATAAATTTTATGCCTGATGAATCTGAATGCAT EMBV3_29108 ATGGATACCTATCACTCCTCCAAGACAGCGAGGAGATTGAGCAGAAATACGACTGTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09478 AACAGCTGACGGACCTGTACCGTGACATTTTCCAGCACTTACGGGATGAAGCAGGCAACA Gene GeneID:514006|NFE2:NM_001014923:30_cdna Constitutive 0 NULL GeneID:514006 5 GENE NFE2 NULL nuclear factor (erythroid-derived 2), 45kDa EMBV3_39871 GTGGTCCCTGTGATCAGATTGGTTAGGTTCCTGTCATTGTGGTTTTCAGTCTGTCTGCCC Gene BVT0101_002388 + 0 NULL GK000007.2:75761534-75895255 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00050917 TCONS_00162310 TCONS_00020562 TCONS_00056339 TCONS_00010551 5 XLOC_031037 XLOC_099192 XLOC_011237 XLOC_034142 XLOC_006102 NonCoding TCONS_00056339 XLOC_034142 NonCoding NonCoding - 14:44727367-44727759 - TSS42016 392 1 TCONS_00056339_1 66 0.831632653061224 1 0 0 0 0 0 0 0 0 0 0 1.04961511280407e-05 0.000712449503228501 0 0 0 0 0 3.85026152516694e-06 0 0 0 0 0 0 0 0 0 0 7.35089933755899e-05 1.54802431131495e-05 3.06747125837198e-05 XR_229055.1 LOC101903110 PREDICTED: Bos taurus uncharacterized LOC101903110 (LOC101903110), 5e-101 370 87.34 0.780612244897959 0 noncoding CTCAGTTTCTGCCTCAGTCAGTCTTTCCCAACAGGAAGCTTCCATAAGCCTCTTATCCTTCTCCATCAGGGGGCAGACAGACTGAAAATCACAATCACAGAAAACTAACCAATCTGATCACATGGACCACAGCCTTGTCTAACTCAATGAAACTATGAGCCATGCCCTGTAGGACCACCCAAGACAGATAGGTCATGTTGGAGAGTTCTGACAAAATGTGGTCCACTGTAGAAGGGAATGGCAAACTACTTCAGTATTCTTGCCTTGAGAACTCCATGAACAGTATGAAAAGGCAAAAAGATAGGACACTGAAAGATGAATTCCCCACATCAATAGGTACCCAATATGCTACTAGAGGTGAGTGGAGAAATAACTCCAGAGATATTGAAGAG TCONS_00051840 . 5' 241243 TCONS_00051840 . 5' 241243 EMBV3_24531 TTCTCCAGAAGAACCTGGCTGGAGGTGAGAAGGTGGGAGGGTACCAGAAAGCAACTGATG Gene BVV0101_023557 + 0 NULL GK000001.2:46011279-46090503 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007390 1 XLOC_002951 NonCoding TCONS_00007390 XLOC_002951 NonCoding NonCoding - 1:46084242-46084871 - TSS4467 629 2 TCONS_00007390_2 58 1 0 0 0 0.000117697959290898 0 0 0 0 0 0 7.19545542979942e-05 0 0 1.36849690239894e-05 0.000224355862241503 0 0.000671838190169052 0 0 0 0 0 3.53926616033745e-05 0 5.33056026079235e-05 0 0 0 9.16233019175565e-05 5.40259113884902e-05 0 NM_016247.3 IMPG2 Homo sapiens interphotoreceptor matrix proteoglycan 2 (IMPG2), 9e-107 390 74.03 0.980922098569157 0 noncoding 0 0 0 0 -0.11726465923942 0.505683088900034 0.0329995612591405 0.519945223618696 TACATAAAGACTGTTAAATTTTTATTTCTAATTAGCTAGTATTAAGACTAGAGCATGTCAAGCAAACAGTACAGTAACATGAGCTTATCTGATCCATACTTTAAATACAGTGTCATCATAAACAAGATGAAACAGAAAAATCTTTCGGTGTCCACACTCCATATTGAACATATATTATGGTATGTACAGTCACTTCATAATCATCACAGTCCACATACATAAATAATTATACCTTATTCTCTGATATTATGGTTACATTTTTCCTATTTATTCCCTTAACCACTAAAAAAAGCAACTAAGTGAAGGAAAAAAGGATAAGGAATCATTTCAACTAGGCTGTAGCTGTAAATTGTGTGTTTTGCTCTGTCTTATTACCCCAAGGGGAGTGATTTAACCTGTGTCTTGTTAAATCAAACAGGTAGTGTAAGGTTTTACAAAATGCATGACTGAAGGAAATTTCTATTTATATTCTTTACACCATCAGTTGCTTTCTGGTACCCTCCCACCTTCTCACCTCCAGCCAGGTTCTTCTGGAGAACACAATGCAACTGATTTGATGATTATGACCGTCACACCATTTTTCTGCATTCACTGCACACTTGGGAATAGAATGAGCTAGGCGGCATGAC TCONS_00003249 . 3' 356 TCONS_00003249 . 3' 984 EMBV3_05959 GCTAGGTTCAGAGCTTAGCCCTCTTGGAAAATAATGTACACGGCAGCTGTTGGTTTCCAT Gene BVV0102_108434 - 1 EMBV3_05723 GK000001.2:64149061-64357118 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32851 GGAGTGCCTCCTGTGGTTACTGAGTTCTTTGCTGTGGTGCACTGTCCGAGATAGTAGGTA Gene BVT0102_058406 + 0 NULL GK000022.2:48607240-48611897 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26946 GCTTTTCTACACGATATTCCGGTTTTTTGAACAGCGAAACCAGCGTCTGCGAGGGAACCC Gene GeneID:100140797|LOC100140797:XM_002697730:67_cdna Constitutive 1 NULL GeneID:100140797 24 GENE LOC100140797 NULL similar to Uncharacterized protein C18orf8 (Colon cancer-associated protein Mic1) (Mic-1) EMBV3_15502 GACCGAAGCTCACTGCACCGGAAGCTTGACAGGAACCTTATTCTACTGGTCAAAGACAAG Gene GeneID:540720|MRPL46:NM_001034712:53_cdna Constitutive 0 NULL GeneID:540720 21 GENE MRPL46 MGC128625 mitochondrial ribosomal protein L46 EMBV3_07583 TGGATTGACAGTAACTTGGTTATACATGACACTGAAATGCCTTACTTTGTATGATATTCC Gene GeneID:540766|SP3:XM_002685296:106_cdna Constitutive 2 NULL GeneID:540766 2 GENE SP3 NULL Sp3 transcription factor EMBV3_33045 ACAAGAGGCCAAGGTGCTGAGACTTTGCTTTTAGGTTAAGCTAAGACTGAGGCTGGGTGG Gene BVT0102_081532 + 0 NULL GK000007.2:12451044-12451712 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211782 TCONS_00215418 TCONS_00215423 TCONS_00215424 TCONS_00211787 TCONS_00215417 TCONS_00211783 TCONS_00215425 TCONS_00215421 TCONS_00215422 TCONS_00215420 TCONS_00211781 TCONS_00211784 TCONS_00215426 TCONS_00215419 2 XLOC_130000 XLOC_130954 Coding TCONS_00211787 XLOC_130000 Coding Coding DDX39A 7:12447486-12451820 j TSS159074 1914 1 TCONS_00211787_2 310 9 0.560350796215094 1.97971018038472e-06 0.000173260849559622 7.99828297508964e-101 8.60082481919966e-05 0.000810631990888502 6.09431242604566e-09 2.53322303226657e-21 1.21599017888043e-19 0.00056347599167345 1.99631004107881e-09 0.00173835846562077 0.000359222600039925 5.63246242077727e-05 1.06724912362676e-08 0.00125593589633399 0.00252375698030612 0.00125854605502972 0.0061206176407372 0.00292399033722452 0.00229115385633937 1.64891082874587e-05 0.000651957314382342 0.000730129795554817 0.00107158438183929 5.53609049991114e-15 0.00055301542764755 0.000755883347643979 0.000533901773046534 0.000256732767200191 0.000283606561420687 NM_001034752.1 DDX39A Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), 0.0 1954 100.00 0.565308254963427 NM_005804.3 DDX39A Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), 0.0 1305 86.15 0.573145245559039 TCONS_00211787_2 sp|Q8VDW0|DX39A_MOUSE DX39A_MOUSE ATP-dependent RNA helicase DDX39A; 0.0 635 99.03 0.996774193548387 2 coding 1 0 1 1 -3.00248512021053 0.00735387386287348 1.5903566845589 0.00011939837208967 CTCATGCCTTGAATGTTGTAGTTCACTACTTGGAGGGGATAATTGCGGTCCTTGCAGGTGACAGTCCTAGTGATGTGCCACACTCGAGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCCAAATACATGCCCAGCGTCAAGGTGTCTGTGTTCTTTGGGGGCCTGTCCATCAAGAAAGATGAGGAGGTGTTGAAGAGAAACTGTCCCCACGTGGTGGTGGGGACACCGGGCCGGATCCTGGCACTTGTGCGCAATAGGAGCCTCAACCTGAGGAATGTGAAGCACTTCGTGTTGGATGAGTGCGACAAGATGCTGGAGCAGCTGGATATGCGGCGGGACGTGCAGGAAATCTTCCGCCTGACCCCCCACGAGAAGCAGTGCATGATGTTCAGCGCCACCTTGAGCAAGGAGATCCGACCTGTGTGCAGGAAGTTCATGCAAGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGGCTACAGCAGTACTATGTGAAACTCAAGGACAGTGAGAAGAACCGCAAGCTCTTCGACCTCCTGGATGTGTTGGAGTTTAACCAGGTTGTGATCTTTGTGAAGTCAGTGCAGCGCTGCATGGCCTTGGCCCAGCTCCTGGTAGAACAGAACTTCCCAGCTATTGCCATCCACAGGGGCATGGCCCAGGAAGAGCGCCTGTCGCGCTATCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTTGTCGCCACCAATCTGTTCGGCCGAGGCATGGACATTGAGCGCGTCAACATCGTCTTCAATTATGACATGCCTGAGGACTCGGACACTTACCTCCACCGTGTGGCCCGTGCGGGTCGCTTCGGTACCAAAGGCCTGGCCGTTACTTTCGTGTCTGACGAGAACGATGCCAAAATCCTCAATGATGTCCAGGACCGGTTTGAAGTGAATGTGGCAGAGCTTCCAGAAGAAATTGACATCTCCACATACATTGAGCAGAGCCGGTAACCGCATGCCCTGACGACCAGAGCCACTCTACTTCCCACGTGCTGCTTCAAGTCCTCTTTCTAGGCGACACTGGGCCTTTCATTTTACTGTTTAAAAGCTGTAGATTTGTGCAAGAATAAGTTTGTATTATGGAAGTCTGGCTCCCACAGTGTCTGTTTCTGTCAGCTCACTGCATTTCATGGACACCAGGGGCCCATGGCCTGGTCAGTGAGCCTCTGGCCAGCAAGACATGCCACCTTCTGTGTCAACATGAGATTTAATTCTTGAAGTGTCAACACTGAAAGGTTTATACAGATTTTAAAAAAACAGGCAATGTCCACAGCCTTCACATCTTTTGAACCCTCTGCCCTGGGGCAGATGGGCCTTAGTACCACGAGCTTTCTTCGGCAAGGAGCTGAGAAGGGCCCTGCCCCTCTCCCACCCAGCCTCAGTCTTAGCTTAACCTAAAAGCAAAGTCTCAGCACCTTGGCCTCTTGTTCTGTAGCAAAGACAGATGACGGGAAAGGGCCAGGCTGGGCACGAGTCCTCATTCTGTCCCGGCCTGGTGTACTTGAGGGGGCTGCCCCTACCCTGGGTGCTGACTGGGGTGGAGCTGAGAGGCAGCAGGAAGTAGGTCCGACCCTCCACCCTTGCTGGGTGTTCAGGGGTTCGGTACCAGACGGTGGCTGTCACCCTCCTCTCCGTGGTGCGTGTGGGGCCCGAGGCAGGAGGGAGCAGAGCATAGAGGGAGGAGAGGAGGTCATCTGTGTGTGCAAAAGCTGCTGAGGCCACAGGAGATGCTGGTTGGCCAGATCTGCGCCTTCACATGCCAGACTCTGAGGGCCTGAGGGCCTGGAGAGAAAGGAGCACAGCGTGAGAACGGAGCCCAGAGACCTGGGGGCCTTCTGTCCTGCACCCCTGACCCCAGGC EMBV3_30562 TGGTGGGGCTCTTCGAGGACACCAACCTTTGTGCCATCCACGCCAAGCGCGTCACCATCA Gene GeneID:521581|LOC521581:XM_002697508:211_cdna Constitutive 0 NULL GeneID:521581 23 GENE LOC521581 NULL similar to histone cluster 1, H3f EMBV3_09412 AGGGCTTAACTCCATACGACGGCAGAAAAGTCCCACCTAGACTTCATGCTATCCTGGCAC Gene GeneID:615062|BCL7B:NM_001034775:293_cdna Constitutive 0 NULL GeneID:615062 25 GENE BCL7B MGC127448 B-cell CLL/lymphoma 7B EMBV3_39783 AACAGAAGAAGGTGGCAAAAGGCTATTCCTCCCCAGAACCTGACATCCAGGACTCGTCTG Gene GeneID:533350|OSBPL8:XM_002687171:114_cdna UTR3_Alt 2 NULL GeneID:533350 5 GENE OSBPL8 NULL oxysterol binding protein-like 8 EMBV3_39607 AGGTACAAGGTCATGGAAGGTGAGTGAGGAGCTCTGAAGCAAGCATTCGTTAGCTTTGCC Gene GeneID:615640|EBI2:NM_001105442:41_cdna Constitutive 0 NULL GeneID:615640 12 GENE EBI2 MGC157063 Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor) EMBV3_35822 TTGTTGCTGGTACTTGGGCTTCTCACTGCTGTGGCTTCTCTTGTTTGGAGCACAGGCTCT Gene BVT0102_183054 - 0 NULL GK000023.2:16797822-16827144 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136465 TCONS_00136464 1 XLOC_082677 NonCoding TCONS_00136464 XLOC_082677 NonCoding NonCoding - 23:16799476-16802697 - TSS101754 3221 2 TCONS_00136464_2 116 0.519714374417883 1 0 0.0011206937226221 0.000489775343758995 0.000432287251436623 3.14451814642288e-05 0.000301963031808604 4.10900400149878e-05 0.000109512777713242 8.90444537082543e-05 0.000257106980298765 7.01120632083828e-06 5.44812305161121e-13 0 1.94360981913232e-06 2.80878200530259e-13 2.43946947574403e-05 3.84945752606724e-11 3.42492752060134e-12 8.38770212431793e-06 8.251708230357e-06 0.000660870531631082 1.10559916684957e-11 0 0 0 9.05373489896935e-05 0.00024143333428102 5.41725292963432e-05 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 8e-53 214 75.95 0.0974852530270102 0 noncoding 0 0 0 0 -0.533892960123242 0.025441244505301 -0.097416595306423 0.252334793280942 ATTTCTCAGAGGAGAGCATCACTGATGGTTTCCTCTGAATTCCTCCATTCTATGAAATACCCATACCTAGAGTGACAGAGCGGACACAGTAACCATTTTTAAAAGGCAAAGACACAGAGACTTTCCTGGTGGTCCAGTGGTTAAGACTCTTCCAACACCGGGGGCCTGGGTTTGACCGTGGTCATGGAACTAGATCCCACATGCCCAAACCAAAGATCCCGCATGCTGCAGGAAAGATCCTTCATGTCACAACTAAGACTCAGCACAGCCAAATAAATAAATCTCTAAAAAGACACAATAAAGAATATTTTTTTTAAATACTTAAAAAAATACACAAATAAGAAGGGAAAAAATCTTAGGCTACCTCTGGCCTCTGATGGGCTCAGTGCCTAAGGTAAGACCATGGGAAAACATATGCACAGCTGTGCACCAGTGCTCCTGGCACCTTCTCACACGGTCACACACACATCCTTAGGAGGCGGGCCCCAGCGGCCAGCGACCTTGAGGGCGCCCTCCTCACCCTCAGTCACACTGTCCTGCGGTTCTCGCCTCCCAGGAGGAGCACATGCATATAGCGACACAGAGCATCTTGCTTCTGCCTCTGCGTCCTCAAGAAAAGAAGCCAGCCTCCATCTCCTTAGGGCCCACACTTCCGAGGGGTCTGGCATCCCTATTCCACCTCAGGCTGAAGGAGAAAGAGGAGAGGGATGTTTTGTCTGTGTCTCCAGATGGGAAACAAGGCCCTGTGATTGATTCTTTGCCCACAGCTGAGGTGGTCAGGATGCAGAGCCGGCCATGGCTGGCAGCTCAGATCCTCGGCTCAGTGCAGAGGCCTGAGTTGGAGGGATGGGGCACTAAGTGATGGGAGGGGGAGCCAGGGCGGTACAGGTCAGTGTATCCAACTTATGTCCTAGAATCAGGAACAGAAGACTAGCATGACTGCAGTTAGATGAAATGTCCGGAAAGGGCGTATTTAGAGAAACAGAAAGCAGACTATGGAGTAGTCCCAGCTGGGACTGGGAGCAGGCATTGACTGCAGGGTAGGGCCCAAGGAAACCTTCTGTGGTGATGGGAATGTTCTAAAACTGGACCGTAAGGATGACTGCACAACCCTACAAGTTTACATTAAACTGTACACTCACAGCTGGCAGATTTTACTGATATAAGTTGTTCCTCATAAAGCTGTTTTCAAAAAGGCAATAATAAAGTACTGAAAATAGTATAATGAGATTCAACAAGTAGTTCATGACCAATTTATGTCTTGTTTCATGTATGTGCATATTCAACTTCCTCACTGTACTGTTGTGATACAAATTCAAGATCATATTATTACATTTGTGTGTGTGTGTATATATATAGGCCACGTCACATGGCATGTGGGATCTCAGTTCCCCAATCAAGGATCAAACCTGTGCCCCCATGCAGGGGACGTGCAGAGTCTTAACCACTGGACCACCAGAGAAGTCCCCATTTGTAAATATTTTAATATATGTCTCTAAAAGATATTTTTAAAAATCATAATAAAAATACCAAAAAAAAAGTAACAAAAATATCAGGGTTGAAAAACTTTGTAAGATTTTCTTACTGTCATCAAATAGTTCATCAATGTTCAAATTTCCAATTTGTCTTACCTATGTTATAAATATTTGTTTACAATTTATTTAAAACAAGCCACATCAAGTCCACATATGGGGATTGGCTGACATGCCTTTTAAGTCTGTTTTGATCAACAGGTTCCCCCTGCAAATCTTCTCTCCTCCCCTCATTTTTCCTGTAGAGGTTTCTGCAGTCTGGAGTTTGCTGATGATACTTCTATACTGGCATTTACAATGTTCCTCAATGCTATAAACTGGAGTTGGATCTGGAGGTGTAATCAGATTCAGGTTCAATCTGGGGCAAGACTACCTCACAGGTGGTGGTGTGTGCTCCCACCATGGGGCACAGAGTATCTGGATGTCTCTATTTTGATGTTAGCAACCACCATGCTCAATGCCCAGAACCATTCATTCATTTGTTCATTGAATATACCAATAAAAATATTATAAAACTCACCTGAGAAAACCACCTTAACAACTGAAGTATAATAAAATCCTCTTTAGAGAGTTCCCAGTGGTCTAGTGGTTAAGACTCTGCTCCCACTGCAGGGGGCTGGGATTCGATCCTGGGCAAGGAACTAAGATCCCACATGCTACAGCTAAGACCCAGCACAGCCAAATAAACAAATATTTAAAATAAAATAGGACTCCCCTGGTGGTCCAGTGGTTAAAAATTGGCCTGCCAATGCAGGAGTCGTGGGTTCAATCTCTGGTCCAGGAAGATCCCACATGCCCCACAGCAACTGAGCCTGTACACCACGACTATTGAACCTATGCCCTAGAGCCCAGGAGCCACAACTACCGAAGCCCGCTATGCCCCAGAGCCTGTGCTCCAAACAAGAGAAGCCACAGCAGTGAGAAGCCCAAGTACCAGCAACAAGAGAGTACCTTTGACTTTCCAGAACTACAGAAAAAGCCAGCACAGCAACAAAGATACAACACAGGCAAAAATAAAACAATAATTTAAAAAAAAAACACTAATAAAATACTCTGTAACCATCACTCATGCACATCAAGAGAGAGATCTTCAGCCACCCAGAAACTTGCATGTGTTCAATTCCAATCATGGCCTCCTTATTCCCTCCAAATGAACCACTGCCCTTACTTTTACAGGAAGGACCAAAAAAAAAAAAAAAAAGGACATAAAACCATAAAGAAACAGGAAGTTATCACCCAAATGTGCATCCCTAGTCATGTGGTTTCACCTTCCTCATTGTTTATATGCCTCTTAAATCTCTTTAAATCTATAGCTGTGGGGATACATTTTTAAAGCATGTGTTCTACGTGAGACACTCCGTGGGCACTAAAGGAGCTATAAAACAGGGGTGAAGAGGAGTCTGAGACCTGAGACTCCCTCTGGCTTGGGAAGGACCAGAGTTAACTCAAGAAGAGAAGTCAGATGAATGTTATGGAGGGACATGTGAAGGGTGCAGAGATTCAGAGAAAGCAGAAGTTAAGCATGTGCAGGATCTCTTCAGGTTCAATCTCACACTCCAGCTTTAACATCTGGATCACACATCACCTCCAGCCAAGAAGAAGCCACAGAGACCAGATATATCTTCCCTTCGATTTTGTTTTTCCATAGGTGACTTTCCTTTCTCAGATATGTTGGAGAGGAAGCAGGNN TCONS_00134276 TCONS_00134278 . 5' 1656 TCONS_00134276 TCONS_00134278 . 5' 1656 EMBV3_19690 ACAGGAAAGCTGAGGACTTCGCCTGCGCTGGTCATCTTCGACGAGACCCTGCAGAAGTGC Variant GeneID:505503|ASCC2:NM_001015524:32_cdna 155^313 1 EMBV3_02177 GeneID:505503 17 GENE ASCC2 NULL activating signal cointegrator 1 complex subunit 2 EMBV3_25505 TCTTACAGCAGATGACACTCCCCCCTGACCCCCAAACGACTCTGTCTTATTTCTTGACTC Gene GeneID:281691|DNAJC14:NM_174274:908_cdna Constitutive 0 NULL GeneID:281691 5 GENE DNAJC14 DNAJ1 DnaJ (Hsp40) homolog, subfamily C, member 14 EMBV3_38770 AGGAGGGTGACATGGACCCCGGCCTGAAAGCTGAAGAAGCAGGCATTGGCGACACGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33143 CGGAAGATCCTGATCCTGAAAATCTAGAACCCACAACTACAAATGAATGCCCATCCCCAG Gene GeneID:539121|MLL5:XM_002686762:57_cdna UTR3_Alt 2 NULL GeneID:539121 4 GENE MLL5 MGC151673 myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) EMBV3_10429 ACCTTTTCCTCGGTTAGGGAACGAGAAGATGTCAGGAAACCCCGAGCAGGCCATCTTTTC Gene BVV0102_266832 + 0 NULL GK000021.2:47198450-47244796 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121423 1 XLOC_073409 Coding TCONS_00121423 XLOC_073409 Coding Coding NKX2-8 21:47196499-47200055 j TSS90457 2590 1 TCONS_00121423_6 311 3 0.272292545710267 0.000889323640500617 0.000743312209320061 0.000451587735521247 0.000262911785403398 5.13576058470021e-05 6.76739095851051e-05 8.28763868820391e-05 1.05038316831122e-05 8.17464968245158e-05 1.09373053987994e-10 2.97507262646623e-06 2.33195394702811e-05 8.53031049247422e-05 0.000435817298583142 0.000339242117058104 1.45158158210249e-13 3.80462051833016e-10 6.86317714047277e-10 0.000278910451451319 0.000611252503029071 6.67674480914834e-05 0 0 0 0.000295361335940314 0.000206731067896774 0.000226732741902583 2.33865020932751e-10 1.84048275061263e-12 1.20362382008417e-10 NM_001192163.1 NKX2-8 Bos taurus NK2 homeobox 8 (NKX2-8), mRNA. 0.0 1472 100.00 0.314671814671815 NM_014360.2 NKX2-8 Homo sapiens NK2 homeobox 8 (NKX2-8), mRNA. 0.0 1175 82.57 0.444015444015444 TCONS_00121423_6 sp|O15522|NKX28_HUMAN NKX28_HUMAN Homeobox protein Nkx-2.8; 2e-119 348 87.03 0.758842443729904 1 coding 0 0 0 0 -0.0265205925981264 0.867912859874523 0.0130162780626174 0.860153109476536 AATCTATTGCCGAGACCTCGGAGAGACGGCCAGCAGAGTGGACCGTGCTCCCAATTCCATTGAACCCCATTGAAAACCATGACAACACAGGACAAGCTCCGATTTATCCCGGCGCGCTAAAGCGCATTGTGAGCAGGCGTCAATCACGCATTATTTCGGACTGAACAAATGCAAAATCTTGACTGGAACAAATGCTTCCAACAGGTCCGGGGCGTCGAGCTCCATTTCCCCTTTGTCCGCGGCCTAGCAGTTGGCCTGTATTGGGGTTGCCTCCGCCCGACCACCCAGCGCGCCGCACAGTCCCGGGCGCCTCGGGCACGCATGACAGGGAAGCTCCTGGGGAGGGTGCGCCGGGCCGGGTGGGGCGGCTCCAGTTGCACGGGAGCCGGGTCCGAGCTCAGATCAGGTGGAGACAGGATTTCAGGTGCGGTCACCTAAGTACCGCCGGCTCGCACCTAAATTTAACAACCCACTACCCTATCCACTGGCTGCAGAAGGAGAGGCTTCTGAGAGCGCGCTCGCTCGGCCCTTGCCTGAAGCGCAGCTACCGTGAAACCATGGGCCAAGAAAATGTGCCCGGTTCCTTGCACCTTCTACACGACCATTTCCTCGGTTAGGGAACGAGAAGATGTCAGGAAACCCCGAGCAGGCCATCTTTTCAGCCCGGCGGGCGCACTCCTAACTCCCGCAATCGGTCCCTTACCAGACCAGGCCCGGCAGCTTTGGTGGAGCGGAGAGCCCGAGCCACCCAAGGCCTGGTCTGGGGCAGAGGACGCACCTCCAGCCCCCGGCCTGACGTTGAGGCTACGGAGCCCAGGCGGTGCCCAGATGCCAAGGAGGCAGCAACGCCCTCAGAAATGCCACCGCCCGTGAGGCCTAGAGTGGGCCTGGGCCAGCCACCGGGGCAGAGTGGGAAAACGAGCCTAATGCCTCGTAGGAAAGCAGTTTGGCCTGATTCTGCCTCCATTTTGCTGGCCTGGGGCAACCCGCGCAGAACTGGGGCTCCCCGGATGCTCCCAGCCCTTCCCGAGCACCGCTGAAGTTGCGGACGCTTGGGGTGTGGGAGATTCCTAGCGGTCTTCGAAACCCTCTGCACAGGTGCTGGCGGGGCCAGGCCTCTCCTCTGCGCCCGCCTGCAACTTCTCGCCTCTGAATCCTTACAGGAGCCCAGCCAAAAAGAGAAAGAGAGCGCGCCAGTGTTCAACGCCGCCTTGTAAATCACTTTCCGGATAATTGCGGGAAACGAACACTCCAGCAAACAAGCTCGAGGAATAAAGCAAACAAGGAATAAATTCCTGGGTGCTCATAAACCCACCCATGTCGCCCCCACCTTTCCCGGCGCTCCCGCAGGGCCAGGCTCGATGTCAGCCCCGGAGGAGGAGGAAGCCGGGACCGGCGGGCGGTGGCCACCGCTCGCCACCCAAGATGTTATTCTTTGTGCATGGCGTGCGCCTCTCAGGCCCACCCATAGGAGCGGCGTCCCGGGCCGCCCCTCGGTTCCAGATCTACCCTGCCCCCGCCTCCTTCCCCTGCTCGGCCATGGCTACCTCTGGACGCCTCAGCTTCACCGTGCGCAGGCTCCTGGATTTACCGGAGCAGGATGCGCAGCACCTGCGGAAGAGGGAGCCGGAGCTAAGCGCCCCTGAGCCCGGCCCCTGCGCCACCTGGCTGGAATCCGAGCGCGGCCACTACCCTTCTTCGGACGAGAGCAGCCCAGAGGCCAGCCCGAGGGACTCGTCGCAGCGGCCGTCCGCTCGGCCTGCGTCTCCGGGCTCCGACGCCGAGAAGAGGAAGAAGCGGCGGGTGCTGTTCTCCAAGGCGCAGACGCTGGAGTTGGAGCGGCGCTTCCGGCAGCAGCGCTACCTGTCGGCGCCCGAGCGCGAGCAGCTGGCGCGCCTGCTACGCCTCACGCCCACACAGGTCAAAATCTGGTTCCAGAACCACCGCTACAAGCTGAAGCGCGCGCGCGCGCCGGGAGTCGCCGAGGCGCCCGACCTGGCAGCGGCTGCCGAGGTGCGCGCCGCGCCCGGCCTGCTGCGCCGCGTGGTGGTGCCCGTGCTGGTGCGCGACGGGCAGCCGTGCGGCGGCAGCGCCGAGGGGGGCACGGCCGCCGCCCGGGACAAGAGCGCGGCTCCGCCGGCCGCCGCCTGCCCTGTGCCAGGCTACGCCGCCTTCGGGCCTGGCTCGGCTTTCGGCCTCTTCCCCGCCTACCAGCACTTAGCGCCCCCCGCCCTGGTCTCCTGGAACTGGTGAGGCAGCCGAGGGGCGCGGGCACCTGGGGCTACGCTGGACTTGGAGTGAGCTCTGCGGCCGGGCCGGGCTACAGCCGGAGACAAGGAGCGCGTCTCGCCGCCCCACCTCCTTCGGCGCGGGGGTCTTCTCCGGCGCCCCCACCGGCCGGCACTCCGGAAACTTTCGCCAAGACACCCAGTCTCCTCTTCCTTCGACCGCCAGACCCAGAGCTAGATTTTATTGCTTGAACCTTATTTGTACATTTTAAAATAGCTATTTGTATGGGAAGCAACTTATTTTAAAAGAAATAGAATATTTTTCCTCTTTGTGGTGCGAGAATAAAATATGTAGGTTTGGG EMBV3_00033 CCAACTAGTCGTGCAGACCACAACTGAAGAGAGACGGAAAGTGGGAAATAACTTGCAGCG Gene GeneID:538789|NDC80:XM_002697735:220_cdna Constitutive 0 NULL GeneID:538789 24 GENE NDC80 NULL NDC80 homolog, kinetochore complex component (S. cerevisiae) EMBV3_32400 TTCATCATTGCCCACCGTCTGTCCACGATTAAGAACGCCAACGTGGTAGCTGTCCTTGAC Gene GeneID:789800|ABCB10:XM_002698768:32_cdna Constitutive 0 NULL GeneID:789800 28 GENE ABCB10 NULL ATP-binding cassette, sub-family B (MDR/TAP), member 10 EMBV3_36992 TCTGTGAAAGATGCCTCCAGAACTACATCCCTGCAGGAGCGCAAGGCAGAGGCCCTGGCC Variant GeneID:534510|TRIM3:NM_001101157:43_cdna 285^700 1 EMBV3_37963 GeneID:534510 15 GENE TRIM3 NULL tripartite motif-containing 3 EMBV3_13937 GCGCGGCTTTGGGAGCAGCTCGTCCACTTCCACCTGCGCAACCTCGCCGTGGCCATGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00108 GGGAAGCGTACTCGTTCTGACACTGAGCAGGCAGTTGAGATAGAAGATCGGAGGATCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31786 TGCACGACTCCCTTTACTGGACATTCTCAAACAGACCGAACGAAGGGCACGGAAAACTGG Gene BVT0102_308418 + 0 NULL GK000003.2:92232937-92245737 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174044 TCONS_00174035 TCONS_00174036 TCONS_00174043 1 XLOC_104506 Coding TCONS_00174044 XLOC_104506 Coding Coding - 3:92264822-92271530 - TSS129244 904 1 TCONS_00174044_2 218 0.180309734513274 7 0.866259132249888 1.50505454374896e-05 3.60456029250103e-05 0.000144690442145551 0 0 0 0 5.29706910885946e-05 0 4.10502745530542e-13 1.89908664602979e-05 2.6853047004706e-06 0 0 0 0.000419409788120832 0.000110191955447024 0.000859141102659039 0 3.18204130947124e-05 2.01485681444799e-05 0.0014112323190697 1.15556694470966e-05 0.000110056668172579 0.00068978072323366 0 4.32025519769734e-06 3.71613235975761e-05 0.000144078091550518 8.52920065089887e-06 NM_001192607.1 ACOT12 Bos taurus acyl-CoA thioesterase 12 (ACOT12), mRNA. 1e-44 185 73.68 0.32853982300885 NM_015547.3 ACOT11 Homo sapiens acyl-CoA thioesterase 11 (ACOT11), transcript variant 0.0 910 92.44 0.686946902654867 TCONS_00174044_2 sp|Q8WXI4|ACO11_HUMAN ACO11_HUMAN Acyl-coenzyme A thioesterase 11; 6e-141 412 96.52 0.917431192660551 1 coding 0 0 1 1 0.0280000853127593 0.811112808201998 0.00286892170895749 0.951554069125201 CTGGAGAGCAGAGATTGTAGCCACATGGTGCCGGCCGAGAAGACCCGGGTGGAGAGTGTGGAGCTGGTCCTGCCCCCCCACGCCAATCACCAGGGCAATACTTTTGGGGGCCAGATCATGGCCTGGATGGAGAATGTGGCCACCATTGCAGCCAGCCGGCTCTGTCGTGCCCACCCTACCCTGAAGACCATTGAGATGTTCCACTTCCGGGGTCCATCCCAGGTTGGGGACCGTCTGGTGCTCAAGGCCATTGTGAACAACGCCTTCAAGCACAGCATGGAAGTGGGCGTGTGCGTGGAGGCCTACCGCCAGGAGGCCGAGACCCATCGGCGGCACATCAACAGTGCCTTCATGACCTTCGTGGTCCTGGGTGCGGATGACCAGCCTCAGATGCTGCCCTGGATTCGGCCCCAGCCTGGGGATGGCGAGCGACGGTACCGAGAGGCCAGTGCCAGGAAGAAGATCCGCCTGGACAGGAAGTACATTGTGTCCTGTAAGCAGGCGGAGATGCCCCTCTCTGTCCCCTGGGATCCTAGCAACCAGGTGTACCTGAGCTACAACAACGTCTCCTCCCTGAAGATGCTTGTGGCCAAGGACAACTGGGTGCTGTCCTCGGAGAGCAACCAGTGTGTAATCCTGCTAGTGTGGAAAACACATGAAGTTACATCATCGCGACAGTAATCAAGATACGGAGCATTTCCATAAACCTCCGATTTTTCTGTCTCCTCTGTGATCAAGCCTCTTCTCTCCCAATCCCTGGAAACCACAGACCAGTTTTCTGTGCCCTTTGTTCGGTCTGTTTGAGAATGTCCAGTAAAGGGAGTCGTGCAGCATGTAACCTTTGACGTATTTCCTTAGGCACAGTGCATTCACTTGTGTGAAGGGATGAGTGTGTTCCGTTTCA TCONS_00170660 TCONS_00170661 TCONS_00170665 TCONS_00170658 r 3' 4120 TCONS_00174045 TCONS_00174046 TCONS_00174047 s 3' 1414 EMBV3_08167 GGAAGGTGACGTGCAGCTGTTTGATCTCCAGAAAAGCTCCCAGAAGCCCACAGTTTCAGT Gene GeneID:531489|WDR34:XM_002691633:324_cdna Constitutive 1 NULL GeneID:531489 11 GENE WDR34 NULL WD repeat domain 34 EMBV3_38104 TCCTTGCCTGGAGAATCCCATAGTCAGAGGAACCTGGGCTATGGTCTGTAGGGTCACAAA Gene BVT0102_397033 + 1 EMBV3_24879 GK000014.2:49504246-49558046 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051911 TCONS_00051910 1 XLOC_031320 NonCoding TCONS_00051911 XLOC_031320 NonCoding NonCoding - 14:49505778-49531241 - TSS38616 293 0.668941979522184 2 0.988571204147357 0.00018574217929314 0 0.000221083725794054 0 2.2190441249037e-11 0 0 6.05602334704152e-05 0 0 0 0 9.79256967022385e-06 0 0 0 0 0 0.000524142206419324 0 0.000155409456649482 0 0 0 0.000106942095650694 0.000222227557521686 0.000440432089607617 0 0 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 9e-27 123 79.02 0.450511945392491 0 noncoding 1 1 1 1 0.0102693663794529 0.93304696638029 -0.0155919779712147 0.740523310077213 GATCCCTGGTTCAGGAAGATTCCCTGGAGGAGGGCACTGCAGACCTCTCCTTGCCTGGAGAATCCCATAGTCAGAGGAACCTGGGCTATGGTCTGTAGGGTCACAAAGAGTCGGACACAACTGAATTGACTTAGTAAGGCAAAGATCACCAAACTGCCTAGGGGCATTGCAACATAGTAAGATTTGAGATGGATGAAAAATATGCCTCTTCCTCCGTATCCTCTTCCTCCTTCTAATGTTGAAGAATTATTTTGAACTTTGGCTCCTTCTCCAGAAGATCATGTTGAGAATCT TCONS_00051909 s 5' 1356 TCONS_00053476 TCONS_00053477 r 5' 1534 EMBV3_16795 GTGATTTCTTCTCATTGTTGGAACTTGCCTGCAGCGACACCTACAGTCTGGGAATGGTGG Gene GeneID:531237|LOC531237:XM_002692896:114_cdna Constitutive 0 NULL GeneID:531237 15 GENE LOC531237 NULL similar to olfactory receptor 1231 EMBV3_41367 GAAGCGCCGACACAACCTGCTTTCCTGAAATTAGCCAATGCTCACCGCATATAGGTATGC Gene BVV0101_025089 + 1 EMBV3_30231 GK000021.2:68601205-68639657 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40834 CGGGGAAATGCAAGTCAAAACCACAATGAGATACCACCTCACACCTGTCAGAATGGGCTG Gene GeneID:100139758|LOC100139758:XM_002707753:15_cdna Constitutive 0 NULL GeneID:100139758 18 GENE LOC100139758 NULL similar to zinc finger protein 347 EMBV3_24307 AGGTCCTTGATCACCGAACAGCTGGCATTCTAGCGTGCATGGGCGTTGCATTGACTTTAA Gene GeneID:532701|RSRC2:NM_001102146:225_cdna UTR3_Alt 4 NULL GeneID:532701 17 GENE RSRC2 MGC143309 arginine/serine-rich coiled-coil 2 EMBV3_30265 ACCATCCTGTCTTCACCAGTATTCATGCTGGGCAGGGGTGCAGGGTCAGCCTGGAAAGTT Gene BVT0102_046950 + 0 NULL GK000019.2:34981888-34984287 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093425 TCONS_00093426 TCONS_00093428 TCONS_00093423 TCONS_00093427 1 XLOC_057144 Coding TCONS_00093428 XLOC_057144 Coding Coding TOP3A 19:34972352-34983889 j TSS70084 5042 1 TCONS_00093428_3 693 0.0952003173343911 12 0.563973647711512 1.91238046206885e-66 2.7978199904146e-25 2.62914105670375e-20 1.57490432062286e-09 6.47221073567312e-24 8.95304394682793e-124 3.33894318244193e-43 0.000534985026266101 1.10855263988523e-14 0.000496027379128865 4.98644035228636e-05 0.000157437652177299 2.37921088608587e-09 1.07814105242685e-08 4.24092746447034e-06 0.00208057266081388 0.0010056779265737 0.000736228780454174 0.00139047264137949 0.000975891323772946 0.000223279122430569 0.000903163967699898 0.000569424854827172 0.00133509208984353 9.9193841260037e-27 0.000518836291167839 7.99166937853293e-10 0.000235331122728107 1.69752933316068e-07 0.00023440719397381 NM_001077975.2 TOP3A Bos taurus topoisomerase (DNA) III alpha (TOP3A), mRNA. 0.0 5445 99.93 0.599563665212217 NM_004618.3 TOP3A Homo sapiens topoisomerase (DNA) III alpha (TOP3A), mRNA. 0.0 2053 81.73 0.415311384371281 TCONS_00093428_3 sp|Q13472|TOP3A_HUMAN TOP3A_HUMAN DNA topoisomerase 3-alpha; 0.0 1182 83.31 0.997113997113997 3 coding 0 0 0 0 0.244054462703615 0.529354197894147 -0.030260486542854 0.581467125857713 TCAGCTTTTGGCACCAGATCCCAGGGCGATGGTGGTAGAGGTCAGGTCAAAAGCCAAGAGCAAGTGGAGGCCTCAGGCTCTGGACACTGTGGAGCTGGAGAAGCTGGCATCTCGGAAGTTGAGGATAAATGCTAAAGAAACCATGAGGATTGCAGAAAAGCTCTACACCCAAGGGTACATCAGCTATCCTCGAACTGAAACGAACATTTTCCCCAAAGACCTAGACCTGGCGGCACTGGTGGAGCAACAGACCCCGGATCCACGCTGGGGGGCCTTTGCTCGAAACATTCTAGAGCGCGGTGGCCCCACCCCACGCAATGGGAATAAGTCTGACCAAGCGCACCCTCCCATCCACCCCACCAAATACACTGACAGCCTGCAGGGGGATGAGCAGCGACTGTACGAGCTCATCGTCCGCCACTTCCTGGCCTGCTGCTCGCAGGATGCCCAGGGCCAGGAGACCACTGTGGAGATCGACATCGCGCAGGAGCGCTTCGTGGCCCACGGCCTCATGATCCTGGCCCGGAACTATCTGGACGTGTACCCGTATGATCGCTGGAGTGACAAGACCCTCCCTGTCTATGAGCAAGGCACCTGCTTTCAGCCCAGCACTGTGGAGATGGTGGACGGGGAGACCAGTCCCCCCCAGCTGCTCACCGAGGCTGACCTCATTGCCCTCATGGAGAAGCACGGCATTGGTACGGACGCCACGCACGCTGAGCACATCGAGACCATCAAGGCCCGGATGTACGTCGGGCTCACGCCAGATAAGCGCTTTCTCCCTGGGCACCTGGGCATGGGGCTCGTGGAAGGCTATGACTCCATGGGCTACGAGATGTCCAAGCCTGATCTGCGGGCCGAGCTGGAGGCTGACCTGAAGCTCATCTGCGAGGGGAAGAAGGACAAGCTGGTGGTCCTGCATCAGCAGGTGCAGAAGTACAAGCAGGTGTTCATCGAAGCCGTGGCCAAAGCCAGGAAGTTGGACGAGGCCTTGTCCCAGTACTTCGGGGCGGCTACAGAGGTAGCCCCACAGGACGCCCTCCCGGCTGTGCCCGAGCCCATCAGGAAGTGTCCTCAGTGCAGCCGGGACATGGTTCTTAAGACCAGAAAGAGTGGCGGGTTTTACCTCGGTTGCACGGGCTTCCCTGAGTGTCGGTCGGCTGTCTGGTTCCCGGACAGCGTGCTGGAGGCCAGCAGGGATGTGAGCGTGTGCCCAGTGTGCCAGCCGCACCCAGTTTACAGGTTGAAGTTCAAGTTTAAACGAGGCAGCCTGCCCCCAACCATGCCCCTAGAATTTGTCGGCTGCATCGGCGGGTGTGATGAGACCCTGAGGGAGATCCTGGCCCTCAGGTTCTCCCAGGGCGCTGCCCGAGTCAGCCAGCCTGCCAGCCAGACCTCCGGCTACCTGCAGGCTAGCCAGTCCCTGAACAGAATGGACAGTGGCCAGCAGGGCCAGCCCCGGCCCCCCGTCACCAGGCCCTCGAAGGCTTTGACCAGGACTCTTCCTCCACCCGCCGTTGAGAGTGAGAGCAACTCGGTGACCTGCAACTGTGGCCAGGAGGCCCTGCTGCTCACCGTCCGGAAGGAGGGCCCCAACCAGGGCCGCCAGTTCTACAAGTGTGGCAGTGGTGGCTGCAGCTTCTTTCTATGGGCTGACAGCGGCCACCCAGGAGCCGGGCCTCCCTCCTCAGCGTCCAGACCCCCAGGCGGCCCCCTGGAACACCCCCCGGGCTCAGGGACTCTCTTGGGCGGGTCCAGCAGGCCTGGCAGTGGTGGCAGCGGTGGCGCATCCTGCCTGTGTGGCCAGCCGGCTGTCACGCGCACCGTGCAGAAGGAGGGGCCCAACCAGGGCCGCCAGTTCCACACGTGTGCCCAGCCCCGTGAGCACCAGTGCGGCTTCTTCCAGTGGGTGGACGAGAACGTGGCCCCAGGGACCTTCGGAGGCCCCCTCTGGCCAGGAAGCAGGAGAGGAACCCAGGGGCTGGAGGCCAGAAGCAAGAGGCCTCGGGCCGGCTCCTCAGACACAGGGTCTGCAGCCAAGAAACCCCGGAAGTGCAGCCTTTGCCACCAGCCTGGACATACCCGTCCCTTCTGTCCTCAGAACAGATGAGGCAGCGTCGGGCTGAGGGGGCCCCCTGCCCTTCTTCCCATCCTTATGTCTTAGGAAGCACGTTGTTTCTCAGGGTCCACCAGCAGCTCTCGGGGTTTGGCCTGTTTGTTGAGTCCGGGTCCAGATCTCTCTCTGCTGGACAGTGGCCCTGTGTGCAGGACCCAGGAACACTGTGTCTACGGCTGAGCAGCCACAGAGGCTGCCTTCTGTGACTCACAGGGGCTGTGCTGTCAGCGCCTTAGTGGAGATTGGCCCTGTCTGCAAGGGGCTTCCACCCACAGATGGCCTGAGAAAGGGTGGGATGCCAGGGAGAGGCTCCTGTTTGGAGGTTGTGTCTGCAGAAGGTTTTTGCTTCTTTATTAAGAAGCTGCAGCCAGGATGCCCCACAGCTCAGGTGCCTCAGTAAAGAATCCAGCCCCTTGACCCTGGCAGTGTAGCATCTGGGGAAGTTTGGCAGGACACTGGGCAGTGCTGACCTGCCTTGCCTCCCCCAGCTCCACCACTGTCCTTTGGGGCAAAGAAGAACTGGTGCAGATGCTGCCGTTTCGGCCTCCCAAGAACCATGGAGCTGAGTGGGAGTCGGTGGACTTTGGTCTGCAGCTCAGATGATAAGTAGGAGTAAGCTGAGCATGACTGAGTTGTATGGCTGCTGAAGCAGCAACCTGTTCTGGGACTCCTGGCCCCAAACCCTTCCCTCAGACCAGCCCTCACACCTGGACTGGACAGTGGGCTGCCCAGAACTGCTCCTGGAGCCTCTGGTCACTGGGTGTTGGTCTTAGCCCAGTGGCCCAGTCCACTTTGTCCCTTTGGTTTTCACCTGTGCTGACCATCTCACATAAACAGCCGCATAGTCGTGGCCCCTCTCTGCTTCCCTCTTGGTGCCCGTCTCCTGGGGTGGCCCTCACGGTCACGCAGCGGTGCCTTCTGTGATTTTCTGACTGAGCTAGTCCGCTGTGTTCACTCGTCATCAGTTGATGGACACGGGGGTGTTTCCACTGCCTGGCTGTTGGGAGCAGTATAGCTGTAAACTTCTGCGTGCAAGTTATTTGAACACCTGTATTTTTGGGGATCCACACTTAAGAGTGGGGTTGCTGGGTCAGTTAATTCTATGCACTAAGCTCTCCACAGCAGCTGCGCCATTTTACCTTCTCACCAGAGTTCCCCTTTCTCCACATCCTTGCCGACGTGCCCTTGCCCATATTGCCATCCTCATGGGCCTGAGGTGGCATCTCATGGCTTTTACTTGCATATCCCCAGTGACCACTGCAGTTGGGCATGCTTTTCACCACTCACATGGCCTTTCATGTTTCTTTGGAGAAATGAAAGGTCTTTTTTAAGACCTTTGCCCGTTTTTCAGTGGGGTGGTTTGTGCTTTTGCTGTTGAGTTGAAGGATACGACCTTCAACTCATCTGTAGGTTGCAATCTCTCCACGGGGATCTCCCGTGCCCACCAGGACCAGAAATGCCGAGTGGGACTGGGGGTCCTGGGCTGGGCCTTCACAGGGTGTCAGGTTCTGGGGGCAGGGTTGCTGTTGGCACAGGTGGTGAGACCATCACACAGATGGGTGGACACTGTGAGGGAGATTTCCACACAGGCCTCCCAGGATGCTGGGCAGAGGCCCCGCTGCCCTCGGGGTGCATCGGCCACCTTTCCCCCCAGACCTCTGTCTCAGGTTCCTGAGCTGCCTCCGTGTTCAGCTCAAAGGTGGGAGGGGCCTGCTCCGCAGGGCAGGGGTGCACCATCCTGTCTTCACCAGTATTCATGCTGGGCAGGGGTACAGGGTCAGCCTGGAAAGTTCCCTGAGGTCATACAGGCGGGCGAACCTGAGGCCCACGAGCTGAACTGCTGGCTCAGGAAGTGGGTGGCTTTGCTGAGAACACCCAGAGCACCGTCCAGGCCCCGTGGTGGCCCTGGGAGCACTGGGCTGGTGACACCAGCTTTGGTGTCTGTCCTTAGTGAACTGAGTGCCACCAAACAGTTACGTTACTGGGGTTTTTAACTTTTTAATTTTTTTTATTTGGACAGTATTTAAAAGACTATCCTGATTATAAAAGAATATGCTTAAAAATGCAAATGCGTCAGATGTATGTGACTTAAACCAGGCTGAAGGCTGCTCATCCTGGAGGGGACCAGGCTGGGGACAGCAGTGGTCCTGGATTAGAGGCAAGGGCTTCCCTCTCCCATCCAGCTCCAGCCTGGCCCGTCAGGGCCCTTGGACCTTGACTACAACCCGGTCAGGAGGCTTGGTGAGATCCCCAGGGACCTGAGTGTGGCTGTGCCCAGCAGGCCCCAGTCTGCAGCCTCAGCGAGAGAGTGCCTGTGCAGACTTTGATCAGGGCTTTTTCTGTTTAGTAATTGCACAGCCTGAAAGCACTGGCTGCGTCGGCTCTGGATGTGATGCACTGTCCTAAGGGGTCCTGCTTGCGAGTTAATCCATGAAAGGACTTGTCTAGTCTGGACACTTTCCAGAGGCCCCCAACTTTGACGGACACTGGACCATCTGTCTCGGTCACTGGTTCGGGAGTGCCTTGCTCTGTGCCAGCACTGGGTTAACACCCCACCCCCACCTGTGAAGTAGGTATTCTGGACCCCTCATCTTACAGGGAGGAGGCCAAGGCTGCCCCACCTCCAGCCTGTCCCCTTGCAACCATCACAGCTGCTCACCACCGAAGGCACTCAGGCCAAGCAGCTCCTGAGACCATGTGACCTAACAGTCCTTGGGGAAACCAGTCTCCTGCCCTCTGCCCCTCTGCAGAGCCACTGAGCCCATGGGAATACCCGGGAGGCAGGTCCCTCCTTATCCGCAGAGGCCACTGGCCCTGCAACCAGAGTGCCCAAGAGCACCTCCTCCAGCCTTGTCCCCATGTCCCAGGTGGGAGGGGGTCGCCTCAGGACATGGGACAAGAAGGAGGGGCCTGGCACAGCTGTGGC EMBV3_38537 CATCTGAGGTCCTTGGTCCTCGTTGGGGAATTGGCCCAAGTGTGATACACACATTACCTT Gene BVV0101_066788 + 0 NULL GK000014.2:25222992-25544904 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053024 1 XLOC_031630 Coding TCONS_00053024 XLOC_031630 Coding Coding IMPAD1 14:25540292-25560879 = TSS39210 7010 1 TCONS_00053024_2 362 0.00998573466476462 5 0.659720198192947 0.000174863962112229 0.000344251021006598 0.00027536983664459 0.000135008983289766 0.000247210869623911 1.29780796355615e-05 0.000167298915409363 0.00014638582824117 0.000389379357540846 4.93657163172351e-05 1.9055223387215e-05 0.0001131335948723 4.89850362018616e-06 3.91792460982365e-05 0.000106494208842258 0.00301000801132941 0.00115889861610031 0.000731105048345495 0.00033860228700046 8.63906251915956e-05 8.36713269390311e-05 0.00166176384563827 0.00117783201153346 0.001736325106106 0.000463233322995112 0.000449573891807372 0.000183161695321948 0.000248821219856995 0.000186655964717829 0.000371664147579454 NM_001046335.1 IMPAD1 Bos taurus inositol monophosphatase domain containing 1 (IMPAD1), 0.0 4325 100.00 0.341940085592011 NM_017813.4 IMPAD1 Homo sapiens inositol monophosphatase domain containing 1 (IMPAD1), 0.0 2744 78.62 0.464051355206847 TCONS_00053024_2 sp|Q2KJ53|IMPA3_BOVIN IMPA3_BOVIN Inositol monophosphatase 3; 0.0 743 100.00 0.997237569060773 1 coding 0 0 0 0 0.073211014896523 0.688057149951305 -0.0236380789278857 0.616267897995471 TAACGTGGAAGCTAGACCCGCCGGCCGGCTCAGCAGCGGGGAGCGCGCTGCCCCGGGGGAGTCGGGAGCTCGGAACGGCCGCGGGGGGCTTCTCAGCGCGGCTTGGTCTTTCCCGGGAGGGAGCAATGGGGCGCGCGGGCGCCGGGGAGCTGGCGCCGGTATAGACCGCGCGGCGCCCGGTTCGGGAGCGCGGGGAGGCCTGTGAGGGCCACCGCCCCGAGCGCCCGGCCTCCCGCCATGGCCCCCATGGGCATCCGCCTGTCCCCGCTGGGGGTGGCCGTGTTCTGCCTGCTGGGGCTCGGCGTGCTCTACCACCTCTATTCAGGCTTCCTGGCCGGCCGCTTCAGCCTCTTTGGCCTGGGCGGCGAGCCGGGCGGCGGGGCGGCGGGGCCCGCGGGGCCCGCGGCCTCGGCCGACGGGGGCACGGTGGACCTGCGCGAGATGCTGGCCGTATCGGTGCTGGCGGCCGTGCGCGGCGGCGAGGAGGTGCGGCGCGTACGCGAGAGCAACGTCCTCCACGAGAAGTCCAAGGGGAAGACGCGCGAGGGAGCGGACGACAAGATGACCAGTGGAGACGTGTTGTCCAACCGCAAGATGTTCTACCTACTCAAGACCGCCTTCCCCAGCGTGCAGATCAATACGGAGGAACATGTGGATGCATCTGATCAAGAGGTGATCTTGTGGGATCGGAAGATTCCTGAGGACATCCTAAAGGAAATAGCCACTCCCCAGGAAGTGCCGGCAGAGAGCGTCACCGTCTGGATTGACCCACTGGATGCCACACAGGAGTACACGGAGGATCTTCGGAAGTATGTTACTACTATGGTGTGTGTGGCTGTAAATGGTAAACCTGTGCTAGGAGTAATACATAAACCATTTTCTGAATATACAGCCTGGGCGATGGTAGACGGTGGATCAAATGTGAAAGCCCGCACTTCTTACAATGAGAAGACCCCAAGGATTGTCGTGTCTCGCTCGCATTCAGGAATGGTCAAACAGGTTGCTCTTCAGACTTTCGGAAACCAGACTACGATCATCCCAGCGGGCGGTGCTGGTTATAAAGTTTTAGCACTCTTGGATGTGCCTGATAAGAGTCAAGAAAAAGCTGATCTATATATCCATGTGACATACATCAAAAAGTGGGATATCTGTGCTGGCAACGCCATCTTGAAAGCCCTCGGGGGGCACATGACCACCCTGAGTGGTGAAGAAATTAGCTACACTGGTTCCGACGGCATTGAAGGGGGGCTCCTGGCCAGCATCAGGATGAACCATCAGGCTCTGGTCAGAAAGCTCCCGGATCTGGAGAAGACGGGACATAAGTAAGCCAAGCTTGATGACAGGTCACAGCCCCGCCAGAGCTGAACGGTCGGCCTGACGTGCTGAGGCTTCAAAGCGGCGGTGGAGACTATGCATGGTTTAGGCCATCCCGAACTTTTTAAAGTATTTATGAAGCATCTGAGACTTCTTTTCCCTGTAATAGGATGCAGGGTCAGGGAGAATGGGTTGCTTCATGTCTCAAGTATTGTCTTTATTTTTGAGACTATTTTCGTACGGTTGTCATACACAAGGCGCATATATATATATTTGTGAATTAAAATCTATAGCTGAGTCTACATTGTTATGAGTCACCATTTTCACACAATATCATGAATCTTCAGTTTGTTAATACTTTCATATAGAATTGGGCTGAAGAAAGGATTGTTTTGTGTAGGTGTTTAATACTACTATACAGTTATATCTCATTGAAAATAAAATAATTGGGGATTTTTACCCCTAATTCAGATAGAAAGCACAAGAAGCTGCAGATTCATTAATATGCAACAGATTCTCTGTTAATGAATATTTCTTATGGATTAAAATAGAAAAAGCTCAAATTGTTTTTTTTTCTTTGAAATTTTAATAACAGTTTCACCAGCTAGTAGAGAATATGGATATATGACGGTTGCATTGTAATTTCTGTGTGTGTGTGTATTGTTTCGTTTTGGTTTGTTTTTATAAAGAGACGTGTGTTTGTACCTATGGGTTCAACATTTCTGCCATCTTGCTAATCAGTTTCACTTGCCCTGTGGATGGTGCATGGTTCTGTCCTTTCCCTCCTGACCCAAATTTAATCTTTAACTTCTAAGGTTTGTATTAAGATTTCAGGGCTTAACGTTAGAATTTTGGTACTTTTTCTCATTAGGGGTAAAATATGCTATAAGGCATTATAAAAATATAATGTTATTCTGTTATTAACTGAAAGTTATTTGAAGTTACATGAATTGAACTAGCCTTCATTATTTTTAAAAACCTTGTTTTAGTACTTTTAAAAAAATTTGCCATGTCTGTAGGGATTCCCTCTTTATCAAGAGTGAGTTAAGGTGGCTTTTGCCATTAATAAATGGATCTGATCTAACCAAGCTCTCAAAGTATTAACCTAAGATACTTTGTATTTTCTCTTTGGGTTAAAAAAATGAAGATTGAACGTACTTTTTGATGAATTTTTTTTCCTATTCAGGTGTGCACAATCTGGTTGAAAAAGGTTATGACATATTTTCAGTGTCAGTGTAATTCAAGCTTTGTTTTGTGAGCCGTCTCTCATTGGGATGTCTGATTTCTCTCAGCGCGATCAGAAACTTCAGTTCAACAGTACCGTCATTTCACATGACCTTGCCACAATTTTGTTCCATAACACACTGATAAGGAGAGGGATTTCTTAGGGTTTCATGGTTTCCTTTTTTCTTCTTGTCTCTCTCTCTCTCTTTAACCCTAGATCAGTTTTTAATGCTTGGTCAATTTTCTGTTTATTTTCTTGTCTTGGAGATAAAGTTGACCAAAGGAAGGGCAGGCGTCCTCACCTGGTGGAATGTGCTTACAACTTTAACTTTAGGCTTGCAGATCACGCCATCTGAGGTCCTTGGTCCTCGTTGGGGAATTGGCCCAAGTGTGATACACACATTACCTTTACCCAGTTTCCAGCAACCGGTCACCAGTCCTGCAGGGCAGTGAGCCTCAATAGCTAGGGTTTTATTCATCAGAATTCATTCCAAGTTTTAGTAGTTGAAATACCTGGTGTTTCACCAGGACTTTTAGGAATTCTGAGCCAAGTGTTAGAGGCTTCATCTTTTTACTTTGCAATGAGATGAGGGAATCTTTTTCCTCAGGAGAGATGGCAGAAGCATATGCCATTTCCAGAGTCCTGTGGTGTAAGTGTCTGTTCTAATTGTGGTGTGTCAAACTTCGGGGAAAGAGACTAGCATATTAGGAAATGGGACTAGTTCATATTAGCAGGCATGGTGTTTTGGCTTTAGTTTTTAATTTTATTAAGCCACACGTAGATAATGACTTTGTGGAGAGCTTGTGTCATGTGCAAAAATTAGGATACTGGCTGACAAATGCATTATTTTTGCGATTTCTTGAGTATAGCATAGTACTAATCGTTTTAAGTGCTTTTATAAGAAGCTCATTTTAAAACAGTTTGTTTCTAAAAGTCAGTATACATTACAGAACTAATATAAATTCAAAGAACAGTATTTATTTTATTTATGTAGGACATTGTGCCAGGACACACCAGTGAGAAACACCTTCTTGTGTGAGACAGATGATATCTCCCATAAATACAAGTATTTCTAAAATGTTTACTCTTAGTGACTCTCACCTACCCAATACCTGATGTCCCTTTCCCTTGTCTTTGCCCTTATTTAGAGGACAGTTTTCCATTAAAATTGAGTTTTATGCATCAGTTAGTAAAAGTAGCACCTTAGGATCCATCAGCTGTCCCCTTCCTCTGCCCCTCTTTCCACCTTGTTCCATGTCTCCCTAACTTGTTAATATATGTTAACTTATTTCTGCTTCTCTTTGTTAACCAATATACCCTTCCCCAACACTTAACCCTGGAATTCTCTCATAGACCTGTGTCTTTGTGATTGGCTGCTGAAATCTTAGGGCAGAACTGAGACTAGAATTCCAGTGGGGGAGATTAATACTGACAGAGCCCAAGTTGACTATTACTTTTCAAAGACTCCTCAGAAAGTAAAGGAAAGTCACCTTTAAAACCACAGAGTAACTGTCAAGAATAACCCAAGGCTTCTGTCATAAGCCTTTCTGACCCATCCTTCAAAGAATGAACGTGCAGAAAATACAAGCGCACTGCCTGCTGGAGAAAGCTTGCTATCTCTATTAGTTTTCATAATTGATTCCTACTTCAGTTGGGATTGTAAGGACCTACGAGACGGGTCCTATTTATCTTTGTTATTCAGTTGTCCCCTTTCCCCAATTTTAGTGTTTTTCTTTGATTCTAAATACTGAGTTATGTATGGCGGGATAATGAAGTGACAAGCTTCATGTGGTTTGTGTGCTTTAAGTAGCAGTTGTGCAGATTCTTCCTGTTTCTGGGTGCTTCCTTTGAATATTGTACAAATTGAGTCGGGGCGGTGGCTGAGGAAAGAGTGGGAGGAGGAAAGGCCTGGGGGAAGGGGGACGCCAGGCAAGCCCTTCCTTGCCCTCTCTCAGGGTGTTTAATTCAGAAATTGGATTTGACTCAGGCTTTGCAGGTGATGACTGTCTCCCATTGCCCAACGTAAGTAAAGAAAGCTGGCGTGCCACTCCCTCCCTATTCCTCAGAAAAGAAAGTACCCAACTGGCCTCTCCTTGATGACAGCTTGAAAATGGCTTTCTGGAGACAATCTTAAGCAGGTTTAAAACGGGAACGGTTTAGAATCTAGCCACAACCACTCACTCACCTTGGCTGTGTCGATTGCTTGTGAATAGAAGCAGTGATTTGGTTTAAGACTTATTTGTTTTTAGCATATGCCTAAAAACGTCTGCCTTGTAACTGTTGTGTAAAATAAATTGATGGTTTCATTTTTATTCTAAAAAAAGTTGTGCCTTAACAATAGGGCATTGTATGTTAATAAGGGAAAACAAAAAATTTTTTTTAGTAGATGGGGAAAACAGTAACTTTTGCCATTGAAATTTAAGTTCTTTTCATGTTTTTAATATTAGAGTTGGGGAAAATCATTAAAGTTGAATAAAATTAATATAAAATTATTTTTACATAATCTAGCATTTACAACTGAAGTACTTTTTTATAAGAACTGGCATCTTGATGTATATGTCTGAAATGATACATAATCCTTTGGTTTTTAATTTGAATTAATAAGACCATGATAGATTTTGATTTTTAATTTTACTTTTAAACTATTTTAGTGTGCTATTATATTTGTTCTAGAACTCTGAGTCACTTTGGTTTTAAAAGCTAGCTGTTTATTTTTCATACCACATCAGAAATTTCTTAATGTTAAAAAATACTGTATGTTTGTGATGTAACCAACCAGAACAGTTCCTAGATTGGGGAGGGTTTGGATTAACATTTACTAAGAAGGCAAGAAGAATTGAACTTTATACTTCTAAAGGAGGTTTTTGGTTTTATGAGGTGCTGGTCATAAAACTTGTTTTCTTGTTTGTTTGTTTTTAATTTTATCAAAGCCAGGCAGGTGTTTGCATTCTAATTTACCATTGATAAAGACACAGGAAAGCCACTTTTTTTTTAAATTATTTTTTAAAATGAGTAATGAATTATGTGGGAAAATGAGATTTATAAATACTAGTTTTCCTTTGAGATAATGTAAATCAAACTTTCATAAGTTAAGGGTGATGCATAATATCATAACTTGTACACTGTGTTTGTAAGGGTTCCCTAAAGTATTAACATTCAGGTAATTTGTGTAAATTGCAAAAGCAGAAACTGTGATGTTCGGTTAGTAGTATGTTGTGTTAGAAGTCTTTTGGGGATGTATGTTATATACATAGTTGACTGTTATTCACTTGCTCCTCTTGTATTAAGTAGGAGATACAACATCCCAAGTCATTTTTAGATCAGTTAGCCTTCAGAGACTTCACCTCTCTTCCCAAATTATCTCTTCCAAGCTGTCTTCATCATCTGTGTTCAGTTACAGTGGAATTGTTTATTGATGTTAATTTATGTGTAAAATATGGATTTCAGTGTCCCTTGTACTCTTGCATCCACTGTTGGCAGTAGCCAAAGCTAGCTTCATAGTCTTACCAGGAGAGACAGCATTCTGCCGTAATGAACTGTGGTGCTGCCAGAGGGATTTTTTTCCCCCTTTCAACTGTTTTACTTAAGTTACTGGATAAGCAGTTGAGTTTACATTAAAACAATGAAATGCTATATCTTGTCTATATTCTGCCTCTTCCAAATTGGATGTTTTTTTTTTTTGTTAATAATTTTTCACTTCCTTATCAATCTTTTATAGGGGGCTAGTGATGAGAGGGGTTAAAATAAAACTGCCTACCTTTGAATACCCCTGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTTGCACAGAGTCGGACACGACTGAAGTGACTTAGCATAGCATAGCATTCCCTCACACATGGAAGGCTGTGGAGGAGCGAGACCATTCCTGTTGCCAAGGCATGCTTCAACACCAGAGTTCTCCTTACTCAGCATGCAACCCCTGCCTCACCCATGTCCCCTAATTAAAGAGGGTCCCGGCTGCAGCCTCTACTGAGAAGTAGAGGGAAGCCCTCCTTCCAGTTTTTTTGAGCAGTTTTCTGGTACCTCCCTTGTTGCCCTCATTTTTACATGGGTTGTTGTAAACTTTTTGAGAACAGGGATTACATCTTAATGATTTTTGTATTTCCACCTTGACCCAGCAGCTAGTCCAGTATCTGGAAAAAATTAGGTGCTTCATGTGTGTCAAACTAAATGGAATAAAGGCAGCATCAGTGTTTTCTCATGCCTCAGTGGTGTAAGCTGCTTGTTTGGTTGGTTTCCTCTGCAGATATTTGTGTTTATCACCCACACACCCTAAGTTATTTTTTAAAGTTTTGTTTTCTTGCCTTCCAATACTACCCCATGGCCAGTTAGCTCTAGAAAATGTAGCTGCCTCTGAATGAAATGATTATCCCAAACTCTGCCCCTGGATATACTTTGCCAAACTGAAATTTGAATTTTCTGAATAAATTGGTCATGTCTGAAAGATG EMBV3_36910 GTCCGGAAGGACGACTTGCACAGAAAGAGACTGCAGCTGTGGAAGTCCCACTGGGCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33407 GGGTTGCCATTGCCTTACCCCTCTACTGAAGTCCTAAAAAAGAAACCCTTTTGTTAATTG Gene BVV0101_032156 + 1 EMBV3_38113 GK000004.2:103520782-103542204 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34894 CCATTGGAAGACGCTACGCCAGGACTGATGTGATTGGTGTGGCTATCGGCATAACCATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06845 CTACACATTTTCAGGTTTTGTCTTCAGTCCCAGTTACATACTGTGTGGCCCCATCTACTG Gene GeneID:538164|DNAL1:NM_001046427:175_cdna Constitutive 0 NULL GeneID:538164 10 GENE DNAL1 MGC137319 dynein, axonemal, light chain 1 EMBV3_14058 CCTGCCAGGCACCTTTGTGTCCTGATCTGCAGCTCCTTATGCTTACTCTAGGAAATTGAT Gene BVT0102_089758 + 1 EMBV3_20997 GK000008.2:111995268-112057390 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229103 TCONS_00229106 TCONS_00229101 TCONS_00229102 TCONS_00229104 TCONS_00229107 TCONS_00229105 1 XLOC_138654 Coding TCONS_00229102 XLOC_138654 Coding Coding FBXW2 8:112053261-112089464 j TSS170634 5361 1 TCONS_00229102_1 170 0.0947584405894423 3 0.85199712723054 4.939106775747e-05 9.30887247475904e-05 0.000171275199274463 4.22839572804121e-12 0.000190271729662246 5.27885785031041e-10 9.65296287451735e-05 3.24131958361015e-05 7.6940643805165e-11 4.6425478444562e-25 1.39965628061463e-05 2.53552844199379e-06 1.29906423154139e-09 2.22026042929083e-09 1.98326578352424e-12 0.00186276703376137 7.80740587583543e-06 0.000874006604754613 0.000300012113946664 7.0723139839159e-05 4.8137936653522e-09 3.79338844578451e-05 0.00100094119571269 0.00132669116175111 0.000126953733141216 0.000202591432388055 9.27091139184084e-05 0.000232527448120941 0.000129360187512051 1.69444409744243e-07 NM_001076974.1 FBXW2 Bos taurus F-box and WD repeat domain containing 2 (FBXW2), mRNA. 0.0 1164 99.54 0.121619100914009 XM_005251908.1 FBXW2 PREDICTED: Homo sapiens F-box and WD repeat domain containing 2 (FBXW2), transcript variant X1, mRNA. 0.0 1180 71.51 0.458683081514643 TCONS_00229102_1 sp|Q58D00|FBXW2_BOVIN FBXW2_BOVIN F-box/WD repeat-containing protein 2; 1e-113 335 98.81 0.982352941176471 2 coding 1 1 1 1 0.0134896564578129 0.942118492943203 0.016284489914944 0.769088571548842 CTCTGGCGGCCCGAGCGCGCCTAGTTGGTGTGAGCCCGGCGCGAGGTCCCGGGCCCCGGGGCGCTCGCTCAGGTAAATTTTTCCATAACCTTATGGAGAGAAAGGACTTTGAGACATGGCTTGATAACATTTCTGTTACATTTCTTTCTCTGACGGACTTGCAGAAAAATGAAACTCTGGATCACCTGATTAGTCTGAGTGGGGCAGTCCAGCTCAGACACCTCTCCAATAACCTGGAGACTCTGCTCAAGCGGGACTTCCTCAAACTCCTTCCCCTGGAGCTCAGTTTTTATTTGTTAAAATGGCTCGACCCTCAGACGCTACTCACATGCTGCCTCGTCTCTAAACAGTGGAATAAGGTGATAAGTGCCTGCACGGAGGTGTGGCAGACCGCCTGTAAAAGTCTGGGCTGGCAGATAGATGATTCTGTTCAGGACGCTTTGCACTGGAAGAAGGTTTATTTGAAGGCTATTCTGAGAATGAAGCAACTGGAGGACCATGAAGCCTTTGAGACCTCATCTTTAATTGGACACAGTGCCAGAGTGTATGCACTTTACTACAAAGATGGACTTCTGTGTACAGGGTCATCAAGACTCCTGAGATAGCAAACCTGGCCTTGCTTGGCTTTGGAGACATCTTTGCCCTGCTGTTTGACAACCGCTACCTGTATATCCTGGACTTGCGGACAGAGAGCCTGATTAGCCGCTGGCCTCTCCCCGAGTACAGGAAATCCAAGAGGGGCTCCAGCTTCCTGGCAGGCGAAGCATCCTGGCTGAACGGACTGGATGGGCACAACGACACGGGCTTGGTCTTTGCCACCAGCATGCCCGACCACAGCATCCACCTGGTGTTGTGGAAGGAGCACGGCTGACACCGTGAACCGCTCCGCCCGCTGACTTCGGGTGCCGGGGCTGCGGGTTTGGGGTGCAGCCTCTGTGGTAGCCGACTGCATGAACCAAAGTTCTCACCTCATGGTATCATCGCGCAGTGCACAATCATGTATCTGTTTGCGGGGGCCAGGGCTCGGGGCGGGGGCTCGTTCTGTTGACACACAGCACAGCAGGCTGGCGGGGTGCACCGCTGGTCCATTTGTCCTTAGTTTGTGGGTCAGTGTGAGAGGCTGCATCTGGGGTTCATCTTTCTTGAATATTGATTTTGAGTAAAGAAATATAAGTGGCTCATTAATCTGCTAATTGGTTGCCTATAAAAACACAGTCTGTGATTAAAGCTTTTTACCATTGCCTTTTTCTCTTTTGAAATTGAAGCAAAGGTGCTATGATGTTGTTACAGCAACTTTTCTCACGCGGGCTCAGCGTTTACAATAGCCCGTGTTGTAGAGACCACCAAGTCCTGTGACATTCATGCTCTCCGCCAACACCAGTTCTAAAGAGAATGTGTCTGCAGTGCAAATGCAGTTCTATAGATTGATGGTTTGTGACACACTTTAAACCCTAGTTCTTGTCAGAGCCAGGATTGGCCATGTCTGAGCTGCACAAAGTTCCGTAGTCTTTGTTTCTGTGGAACAGGCTGGCGCCGGGTCACCTGCCACCGCCATGACTGCGTAGCGGTGCCATGGTGCAGTGGAAGGCGCCAGGCTGGCAGACCGAACCCTGGCCGTGCTACCCAGGAACCCTCAGCCCAGGAGTGTCGTTCTTGGCCCCGTTTCCTGTCTGTATAGCTAGTTGTTAGGCTGTCGTTTTATTTCTGGGATTCTCTCTGGTCCTGTGTCTGCCAAGCTGTGCAGAAGTTGGTGCTTCAGTTTTGTCTGATTGCTAATTCGTTGTTTCTTGGCATTTGGAGATCATCTGCAAATGAAATCACTGATACAAAGTTGTCATCTCTAAGGAAATCAAACATGCAAAAAAAGAATGGATAAAAGGGAATGTGGAAAATGTTAACACAGTCCACTTTAAAAAATGTAAGCAGTTGGTGGAAGAAGTGCTGAGAGGAGTCGGGGTTCTCTGAAGAAGCAGGGTGCCAGATCAGAGAGAAAGACCCCTGACCCTGACTCTCCTTCCTCCTCTGTCTCTATCTTGACATGTAGCCTCAGGCAGGCTAACTTTCTGTTGAAAAGGAAGGAATTGCGCTAGATGAGGGTTTGCAGACGTGCAGGCCTGGGGAGCCATGCAGATAGCGTGAGTGAGCGCAGCGCTCTGGGCAGGAAGGCTCTGTACCGAGGGACGCGCGTCTGCAGGGCAGTTTCAGAGCCCTGAGCGTCAGGCAGGAATAAGCCCGGTATTGGCGCAGGTCTTCTGACTTTTCAGCCGGAGGTAGGCATCCAGAACTGTATTTGTAATTCCCTAATTTTAAAGATGTGGACAGTGGTTTGGAGTAAAATACAGTGGGCCAGTAATGCAGCGAGTCTTCAGGCTGCCAGCTCCATTCCCCACCTTCTCGTTCCTGCAGACTAGACGATGGCTGTGATTCAGCAGGGGCAGTGTTTTAATGTAATTGTCACAAACGTTAGGGAGGAAGTCGAGGGAACAAGTGTTGGGAAGAATTCAGGAGTTCCCCATTGTGTGACAGAGGATTGGGGGGGGCGGGGCGGGGGTTGTTTCATTCACAGACCCACAGGAAAGTATTAATAGTTAGAAGATGAATTTAAGAGCTGGAACCTGAGTGGGAGGCTCTGCCTGGGAATATGAGGGATTCCTTCTTCTTGTTAATTTTGATATTAACCCATTTTTCAGGTAGGAAAAAGGTTGCTGGCAGAGCTGAGAATGATTCAAAGTACAGGGGGGACGCTGCTCTCCCAAATCCTATCACCCTAGAGCCTGACAACGGACCTCCGAATGCTGCAAAGTCAGGGTTTTAGAGAATTGAGTTGGTTCCAAGGGTGCATTTAGGTAATATCCATGCCGAGACTCTGAGGAAATCGGGTGAAAGAACACGATCTTCACGCCCCACATCCATCTCATGTTGATTTCTGTGGGTGAGCGCTGCTTGGTGCTTTTAAGAAATGGGACTAGGTTCAAAGCTGGACTCTATTGCTCAGGAACCTCAGGAGGCTTTGGGCCACGGTGAGGGGAAATGACTTTTCTCATTTCATCCACCTGGAGCTTGGAACAGAGATGACAGATCTGATGATCACCCGTAGCCCCACCTCACCTTCCAACATCCATACACTTGCTTTAAAGAGCACGCGGTTACATAGTCATCTGTGGGGAAAACTTGGAAATGACAGCCCTGAAGCTTGTATGGCACGTCTCCTTCCACTCTTCAGTGGTGAATACCAAAGTTACCATCAAGGCAGCGCAGTGCTTGGAGTCCTGCCTTCACCCCTCTTCACATAGTATTGCGGACCAGAGTCAAAGCTGTGGTTTTCCAGTAGTCACGTACAGATGTGAGAGTCGGGCCAGAAATAAGGCTGAGCACCGGAGAACCGATGCTTTTGAATTGTGGTGAGGGAGAAGACTCTTGAAGTCCCTTGGATAGCAAGGAGATACGTCAATCCTAAAGGAAATCAACCCTGAATATTCATTGGAAAGACTGATGCTGAAGCTGAGGCTCCAATACTTTGGCCACCCAATGCAAAGAGGCAACTCGTTAAGAGAAGACCCTGATGTTGAGAAAGATTGAAGGCAAAAGGAAAAGGGGGCTGAAGAGATAGTTTGATAGCCTCACTAACTCAGTGGACATGAGTTTGAGCAAACTCTGGGAGATAGTGGAGGACAGAGGAACCTGGTGTACTGCAGTCCGTGGCGTGGCAAAGAGGTGGACACGACTTAGCTACTGAACAACAGCAGCTTCTATAAAAATGGAAAACTGACTCATCCTTTGGAAAAAAGTAAAGCGAGGTGGGGAGTTGGTGAGCGCAGTGGACGGGGGACTCAGGCTCCTCTCACAGAGTTGGGCGCTCTTTCCCGCGCACCGACGTCTGCTTCCGTAGCGCGGACGCTAGGGCTTTGCCTTTACCTCTTCTCTGGAGTATTCTCTTTTCTGAAACATTCTCAGGTCATGAGCAGATAGACTCCGTCTTTCTTCACGAGCTTTGGATTTCTCCAGTGACCCTAGTGTGGTGGAAGGTGGGGTGGCTCTCTGCTCGGGTCTGTGGAGGGACACATAAGAACCTGGGGCTCTGGGGGGAGGATGGGGCCCGAGAGAGCTGAGGGGGTGTGAGGTCTCAGCAGGCTTGGTTCCCATTCCAAAGGAAACTGGTTCCCCCAGCAGGCCCCATTATTTGAAAACTGTAAGTGATGTCACGGCTGGGTTTCACCTGACCTCTTAGACCCATCGGAGAAGTGGGAAGAAAGACTTCCTCCAGGGGAGGGGCTCGACTTTGAACAAGTCCCACAGGAAGTGCCCATGTTTGAATGGCTTTTAAGTGGGAGAAGTGGAATACTGCTGTTGGGTTTTAAGGTGTGCACCTCCTTTTTCATAGTTCAAAGTTGCTCTGTTCTGGCCATTGGAAATGCTCAGGAAAACATGAGTGAGGATTACATGATCATGCCAGTATTTGCTCTCAGGAGAATGTTTACTGCTCTGCATTTGTAAAACATCTTAGGGAGAAAAGAAATAACTTCTGCAAACAGTATTACGTTAGTCATGAAGAAATTGTTTCTGTCAGGTGAGGCGTTTCAACTGAGCAGAAGTGGCTGAGGAGAGTGGAGCCCGGCTTGACACATTACTTTGGCCAAACCCAGCCAGCGGCCTGAAGCCGTGGTCATAGCCCCGGCTTCCGGGGTGCCTAGAGACGGGTCTCCCCACCGTTCCGCTCCTAGCTCTCCGCGCCTCCTCGTCTGGGCCTCTGCCGGGCCCTGGTGTCCCAACCGCTTGCCAGTGTTTGTAGGGAAGTGTGTAGTCAGACTGCTGTCCCGGGAGGCAGCCTGGGCCAGGGCGCACTCTCCCCTTTGCCTTCCACCCATAGGGTTGTTGGCACAGGGGAGAGGCCCCAGGTCCATCCCCTGGACACAGCCTTCCTGCCTGCTTATGCTGGTGCTTGCCAAGATGTTTACGATGACCAAGACCCTCTTGAGAATTCTGCAGTCCCTAGATAGAGTGTCTGACGGAGGGGACAGGTTAGCACTCTTGACAGAAATGCCTGCCAGGCACCTTTGTGTCCTGATCTGCAGCTCCTTATGCTTACTCTAGGAAATTGATTTCAGGATAAATCATCAAATGGATTACCAGTTATCTTTGCACCATTCCTTCAGCCTGATCGGGCTGAATGACCACGCTCGGTGCAAAAAGGGGTTTTGCTCTCAAGTTGTTTGAATGTGTTTCCAGTCTCCCCTGTTGCGTACAACTTGTATTACAGTCTTGACTAGTGTGAACATACTTAATGATTGCAGCTTAAGAAACCCAGCTAACTTCTACTCTTCATGAATGTACTCAAATAAAAATGTGTTTTTGCATATTTAA EMBV3_39009 GCTGAGATCATCCGGGAGAGTGGGAACCAGGTGTATATGTTCTCACAACCGCCCTGATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25479 CGGAGGCGCTGGATCGACTGGGAGGGCCCGGGTGGGTTTTGCAGTTGGTTTTCAATAATC Variant GeneID:616329|ZNF606:XM_002695451:106_cdna 187^372 1 EMBV3_15571 GeneID:616329 18 GENE ZNF606 NULL zinc finger protein 606 EMBV3_06383 AGGGACTCGCAGCTTGTGGCACGTTTGCAGGCTCCATGACTTCAGCACTTTACTACGTTT Gene BVT0102_155689 + 0 NULL GK000019.2:62496101-62506949 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094897 TCONS_00094898 TCONS_00094899 1 XLOC_057580 Coding TCONS_00094899 XLOC_057580 Coding Coding SLC16A6 19:62486089-62497646 = TSS70888 3447 2 TCONS_00094899_3 516 5 0.70214607130495 8.28880430944082e-05 0.000130144190379771 0.000190599079097151 6.79153293932528e-05 0.000500620507815389 9.19979356768747e-05 5.18529550767998e-05 5.60348090012464e-05 1.16370558234092e-06 0.000233860780643309 0.000275596515541253 0.000132415303285885 8.29316827393652e-05 6.55523868591584e-09 0.000291206486497021 0.0027811721863061 0.00155089334049993 0.000954273637090308 0.00018026401789509 0.00016619153772075 1.37770915897041e-05 0.00121398774580038 0.00117812697053288 0.00231503900372548 0.000130821459465508 0.000264411568578342 0.000147290045325282 0.000475524562257455 0.000368906056431476 0.000754917938419487 XM_005221360.1 SLC16A6 PREDICTED: Bos taurus solute carrier family 16, member 6 (monocarboxylic acid transporter 7) (SLC16A6), transcript variant 0.0 6217 100.00 0.999709892660284 NM_004694.4 SLC16A6 Homo sapiens solute carrier family 16, member 6 (SLC16A6), 0.0 1997 72.55 0.999419785320569 TCONS_00094899_3 sp|B1AT66|MOT7_MOUSE MOT7_MOUSE Monocarboxylate transporter 7; 0.0 837 79.01 0.998062015503876 1 coding 0 0 0 0 0.00191646872321571 0.989357018678351 0.047819091041558 0.454295092807047 GAATGTCCCATAAGAAATCACAGCTTTGTTGCAGAGCCAATGTTTACACTCAAGTGCCTGACGGTGGGTGGGGCTGGGTGGTCGCGGTTTCCTTTTTCTTCGTTGAAGTCTTCACCTACGGCATCATCAAGTCGTTTGGCGTCTTCTTCAATGACTTAATGGACAGTTTCAATGAGTCCAACAGCAGGATCTCGTGGATCATCTCCATTTGTGTGTTCGTCTTAACATTCACAGCCCCGCTCTCCACCGTCCTGAGCAGCCGGTTCGGACACCGCCTGGTGGTGATGCTGGGCGGCCTGCTGGTCAGCGCGGGCATGGTGACGGCTGCCTTCTCGCAGAAGGTCTACCACATGTACATCGCCATCGGCATCGTCTCTGGCCTGGGGTTCTGCTTCAGCTTTCTGCCGACGGTCACCATCCTGTCACAGTACTTCGACAGGAGACGCTCCGTGGTCACGGCGGTCGCTTCTACGGGAGAATGCTTCGCCATGTTTGCTTTTGCACCAGCCATCACAGCCCTGAAGGAGACAGTGGGCTGGAGGTACAGCATGCTGTTCGTGGGGCTCCTGCAACTCAACCTCGTGGTCTGTGGCGCACTGCTCAGACCCATCGTCATCGTCGGCGCGCCAGGGACCCCCAAGACCCCCGCCCCCGAGCACCGGAAGGAAGCGCAGTACATGCTGGAGAACGAGAAAACCCGCACCTCCATCGACTCCATCGACTCAGGAGTAGAGCTAACTACCTCACCGAAGAACGTGCCTGGCCACCCGGCCATGGTGGAGCCCGCGGCCGAGCTGCAGGCCCGGGGCCAGCCCGGCGCCCCGCTGCTGGACTTCTCCGTGCTGACGGAGAGGAGCTTCATCTGCTACACGCTCTTTGGGCTCTTCGTGACGCTGGGCTTCTTCGCCCCGTCCCTGTACATCATCCCGCTGGGGCTCAGCCTTGGCCTGGACCGCGACCGCGCGGCCCTGCTGCTGTGCGCCATGGCCGTGGCCGAGGTGTTCGGCCGCATCGGGGCAGGGCTGGTCCTCAACCGGGAGCCCATCCGCAAGGTCTACATCGAGCTCATCTGTGTCATCCTGCTGACTCTGTCCCTGTTCACCTTCACCTTCGCTGCGGGCTTCTGGGGCCTCATGGCCTGCAGCGTCTTCTCGGGGGCCATGATCGGGACCGTGGCGGGCACCCACATCCCGCTGCTCGCCGAGGACGACGTCGTGGGCATCCAGAAGATGTCGTCGGCGGCCGGGGTCTATGTCTTCTTCCAGAGCATCTCGGGGCTGGCCGGACCCCCCCTTGCAGGTCTGCTGGTGGACCAGAGCAGGATCTACAGCAGAGCCTTCTACTCCTGTGCGGCCGGGATGCTGGTGGCCGCCGTGTGCCTCGCCCTTGTGAGACCCTGCAAGCAGGGACTGTGCTGCCGGCCCCGAGCCCGGGAGGGCAAGGCCGGGGGTCCCCGAGGGAAAAAAGTGTTGCAGGACATCCCCGAAGACTTTCTGGAGATGGACCTGGGGAAGACCGAGCACAGAGCTCCTGCAAGAACGGAGCCCGTCTGACACCCGCGTCCGTCACTGCGGCGCCCCAGGGCCGGGGAGGGCGTGGGGCGGGGGGCCCGGGCGGCAGAGCAGCGGACCACCCGCCCGCCTTCCGACTGCACTTCAAAGGGAATGTATGTGAGAACCACTACCAACATCCGTCTTGTTTTCTTCTTATAAGTTTTCTTTTTTGCTTGTTTTTTATGCCAAAACAAAAGCAGTGGAGCGCCTTTCTGTGCATCAGCCTGGCTGGGTTCAGCAGCAACACAAAGACACACAGGAGGACTCTGGGCCACATTCCGGTTTTAAAATAGGGACATGAATTGGCAAAGTGGTTTGAAGAGCTCTCACGTTTGATAAGCCGCTATCGTAGAAAATGACATCTGGCCCAGGCCACTGAAATGAAATCAGCCACTCAAAAAAAACACAACTTACATCATTGAAAAAATTCCTCATTTTCAGAACTATGAACAAATTGTTTAAAAACCTTTGAAAAATTCTGAGGTTTCCATGAACACATTAGGGCCTCTGAATTTTCCAGATAATCCATGGAAACAAAGTACAATTTAAGACCAAACCTTTGGCCAGTAAATGGAGATTCTTAAAAATATACGTTAACTTGAACTTCAGAAATGTGAAGATGACCACTTCCTTGTGCGGCCAGTCATTTACCAGTATTTCAATACAGACCACACAGCATGGCATTCAGAAATGAATTTCCTATTGCTTTTTAATTATTCAGAAAAATGTGATTGTAGTGTCTTTAATTTAAACCACTATTTATTATTAAGTTATTCTAGAATGAATAAAGTAATCAAAAGAAAGTCTGAGACATAAGCAGAATTTTTACCTCCCTTCTGCAATCCTTGACATGCCTCTTAACTTGTAAAGTTACTCTCTAAAAGGCCAAGTTGTAAGGATTCTTCAGTTTAATGGCAATGTGTGTGGTTGAAAGGGGGCAGGGGGATGAACAGCAAATCGCCTTAGCTTTTTTAAATGATTTATCGCCTAAGAATACTTGAGGATCTTCTTTGATCAGAATTATATCTCATTGAATTGTTGAAGCATTTGATTTCTTTTTACCATCTCACTGTTGAAGCGTTTCTGTATTTCACAAGGGGCAGCAGACATTCAATTCGCCGTCATGAGTTGCGTTCTAGGAACCTTGATCGCCCTGCGTCGCAGGGTCACCGGGCAAGCCGGTCACTGTTCCTTTTGGCATCACACGACACGGATAGTATTTTTTTTTCTGTAAAGGGCAGGTTATGAGGGGAACAGGTGGGCTACGGACTCACGTGTCCGGATCTCATCTGCAGGTGACGGTCAGAGCCGCTGCTCCATCTCTACTCATTTTACTGTTAATTTTTGACAACTCAGGGGGAAAAACTACAACAAGCCTAGTTTGGTTCCAGGTACACACAAGCTCGAGCGTTTCTCTGCACGGACACGACAGTGGCATAGCTGAGCGCCTGCTGCGTTTTGTGCGGCGCTGGGTCAGCCAGAGAAACAGGGCAGTCTGCAGACGCTGCGGAGGGCGGGGAGGGGCAACCACCGAGTGTCCGTCAGAGGCAGGCACAGCTGGGACGGGGCAGGCGGGGCGCATGCCACTGCCCAGAGGGACTCGCAGCTTGTGGCACGTTTGCAGGCTCCATGACTTCAGCACTTTACTACGTTTTTACTATGAATGTTCGATACAATTTAATATTTATAACTGGTTTCAGAGCGATCTGCTCAAGACGTCCATTCTGTTAAATGCATGGGAAAAAAAAAATGTATGCCAATTTCAGTATGTCAGTAATCGAGGTTTTTAAATGTTTGGAAGAAAATGAGAACAGGATTGCTGATTTGTTCTGTATTCTGTGACATTCTGGTACTTCTAGATTTGCAATAAATGTATGGCTTTTTTATTTAGAGG EMBV3_37956 GCTCACTACCACTGCTGAAAGAGACAAAGATAACCCAGAAGATGCTCTGCTAACTGATGA Gene GeneID:519098|CLPH:NM_001040539:5_cdna Constitutive 0 NULL GeneID:519098 6 GENE CLPH C6H4ORF35 MGC133759 chromosome 4 open reading frame 35 ortholog EMBV3_35516 ACGGGGGTCGCTACAGGACGGTGCACACTGGCTGCTAAGCAGAGAATCTCCTTCAGGCAC Variant GeneID:514666|APEH:NM_001083431:166_cdna 154^280 1 EMBV3_15445 GeneID:514666 22 GENE APEH AARE APH MGC139504 N-acylaminoacyl-peptide hydrolase EMBV3_11559 AACTGTCCAGGAACACACTGACTGGCTGCCCAGAGAATCCCCTCCTTTGGAAGCTTTCTA Gene BVV0102_312833 - 1 EMBV3_00641 GK000008.2:39460959-39497222 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227379 TCONS_00227386 TCONS_00227380 TCONS_00227385 TCONS_00227384 TCONS_00227381 TCONS_00227382 TCONS_00227383 1 XLOC_138232 Coding TCONS_00227386 XLOC_138232 Coding Coding CD274 8:39496047-39602995 j TSS169766 2736 1 TCONS_00227386_1 312 0.135964912280702 7 0.974482687686424 0.000242598917237402 3.53605262662907e-05 0.000148445358122976 0.000193893050911051 0.000181009326980668 4.88181200576187e-05 0.000106538652814821 0.000277223867795298 0.000466278555134067 5.01793218011738e-13 4.32722082212181e-19 1.62553199863665e-27 1.67914976574097e-05 1.83960726993018e-35 1.32195303960282e-27 0 0 0 0.000312697989520682 0.000103817335868316 3.15786806997862e-10 0 1.00771007098612e-15 6.79810678310813e-13 5.94414602853931e-05 0.000312314475232879 7.12463674365263e-05 1.79319716619201e-19 2.09569850298984e-19 8.80936094500597e-23 XM_005209964.1 CD274 PREDICTED: Bos taurus CD274 molecule (CD274), transcript variant 0.0 3402 100.00 0.688961988304094 NM_014143.3 CD274 Homo sapiens CD274 molecule (CD274), transcript variant 1, mRNA. 0.0 1377 76.93 0.654239766081871 TCONS_00227386_1 sp|Q9NZQ7|PD1L1_HUMAN PD1L1_HUMAN Programmed cell death 1 ligand 1; 5e-151 430 73.20 0.923076923076923 6 coding 0 0 0 0 -0.0521881166064078 0.634882997795225 0.0285448069220696 0.636083169619692 AGTCAAGACGAGGGCAGCTGTGGAGGCGCTACCTAAGCTTCCCGAATTTCCCAGGGCCCTCAGGCTGCCCCAGGTGGCAAGCTGTTAGTTCTGAAAATGGTTCGTTTTTCTCTCTACCCTCACTAGGAAGATTTATCAAATGAAATATGGGGCCGTGACTAACGGATAAAGCCTCCCTCTAGTGAAATGGATTTCCCGCCTCTTTTGCCTGCTTGCTAATGGGACGTCGCCTCCTTCAAGAAACCTTTCCTTTTCTTCATGGTATTTATCTCGGTCATTCCAGAAAGATGAGGATATATAGTGTCTTAACATTCATGGCTTACTGTTGTTTGCTGAAAGCATTTACTATCACAGTTTCCAAGGACCTGTATGTGGTAGAATATGGCAGCAATGTGACGTTGGAATGCAGATTTCCAGTAGACAAACAATTAAACCTGCTTGTGTTAGTTGTTTACTGGGAAATGGAGGATAAGAAAATTATTCAGTTTGTGAATGGGAAGGAAGACCCAAACGTTCAGCACAGTAGCTACCATGGGAGGGCCCAACTGTTGAAGGACCAGCTCTTCTTGGGAAAGGCTGCACTTCAGATAACAGATGTGAAATTGCAGGATGCGGGGGTTTACTGTTGCTTGATCAGCTATGGCGGTGCCGACTACAAGCGGATTACTTTGAAAGTCAACGCTCCATACCGCAAAATCTACCATACAATTTCTGTGGATCCAGTCACCTCTGAACATGAACTAACGTGTCAGGCTGAGGGTTACCCTGAAGCTGATGTCATCTGGACAAGTAGCGATCACCAAGTCCTGAGTGGCAAAACCAGCATCACCAGTTCAAAGAGGGAGGAAAAGCTTTTCAATGTGACCAGCACACTGAGAATCAACACAACAGCTGACAAAATTTTCTACTGCACTTTTCGGAGATTAGGTCATGAGGAAAACAACACAGCTGAGTTGGTCATCCCAGAACCATATCTAGATCCAGCAAAAAAGAGGAATCACTTGGTGACTCTGGGAGCTCTCTTCTTATGCCTGAGTGTAACCCTGGCAGTCATCTTCTGTCTGAAAAGAGATGTGAGAATGATGGATGTAGAAAAATGTGACACCCGAGATATGAATTCAAAGCAACAAAATGCTACACAGTTTGAGGAGACGTAATCCAGTGTTGAAACTTCTGCTCTTAAAACAGGGATTCTCAGCCTGTGGTTTGGGTTTATCAGACCAGAGGTATGCAGTGGGCCAGGGGGCTGCAGATGATGGAGAACTTAAAAAGCCCAAGCTCCGAAAACAGAAGCTCAGAAAGAAGAGGAGGACAAAGGAAGAAGGAATAAAGGTACCCTGGAAGGAAACATTGGTACTTCCGAATGGTGGAAGACTCATCAATACATGTGAAAAGGAGAAAGGACACTTCTAAATGATGAACTTCCATGCACATTATCCATCACTCATCTTAGAAAACAGGTTGAGATTCCCTGATTTAATGGTCAGTTCCTACAGAAGTGCCCTTTGCCTTTATTCAGTGTCTTGATTTGTCTTCTGGTTGATTGAACATCCTAGTGTTGCCAGGTGTGTGAGTATGATTTATTTTTATTTATTTTTAGTCTGTGGGGTCTTGTCATATAAGTGTGGTTGTGAGTAATTTCTTCTAAAGATATGCTGTAGTAGAAAGTAACACTTTAATGTCACCAGACCAAATTTACTGCTCGATGACTTGTATGTGTCGAGTGAAATGTAGTATTTTTAAAGTATTTGATATCCTCTATAACTGTCAGTACTTACGAATCATAGAGAACAAACCATTAGTTTGTATAAGATATTTTTAATGCCTTATTTAACCCACTGATACTTCAATTGACTCAGATAATCTTATTCTCAGACCTCAAAATAAGATATGTTACCAAAATATCTCTTATATTTAAATAGCAGCTTTACAACTATGTGTGCACATAATCTCATTTCATCCCTGTGTTGTGGTAAGCACTATTATTCTACCTGTTTCACAGCTGAGGGAGCAGAGGTACAGAAACATGACCAAGGCAATATATAGCAGACTTCAGATTTCCAAAGGTGTCACCCTTCATCCTTTTATTTATTTATTTATTTAAATTGAGGTCTGGTTGATTTACAGCGTCGTGCCAATCTCTGCTCTTAAGCAAAATAACTCAGTTTTATATATATATATATATATATATATATATATGTTCTTTTTTAATTATTAAAGAATTAATAAAAGCACTTTGTTACCTTCTGTCCTTTTAGAATATAATTTACAGCTATGCTTTACTTTAAGACATGTTCATTCAGCAAACATTTAGGAAGTGCCCTAGCATGTCAATCACTGTGCCAGGCAGAGTCTACAGATGTGAGCAAGATAAGGAAACTTCCCTCTAGGACCTCATAATATAATAAGGACATCAATAAGAAAATGTATTGCTATAATATGCTATAATGCACTTATGGCACTAGGTATAAGAGGAGAAAAATGTTGTGAGGAGGAAAGTTTAGAAAGCTTCCAAAGGAGGGGATTCTCTGGGTAGCCAGTCAGTGTGTTCCTGGACAGTTGAAAAGCGTAAATATTTTAAAAATCAAAGCGATTTCAGTTTATGAGATATCAGTATTCTTTAAAACCATGGAAAATGGCTCCTGAAATCCTTTTCTTTTTTTTTCTAATTTTATTTTATTTTTAAACTTTACATAATTGTATTAGTTTTGCCAAATATCAAAATGAATCCGCCAC EMBV3_01332 TTTGCTTGCTTTCCTCCTTCTGAAGACTAGAGCGTGAGATTCCTGAGCGTTTTACCATCC Variant GeneID:538772|DARS2:NM_001102222:172_cdna 96^265 3 EMBV3_17202 GeneID:538772 16 GENE DARS2 MGC157196 aspartyl-tRNA synthetase 2, mitochondrial EMBV3_34875 ACTGGTAGGGGGTAGAGGGGGAGCAGCTGGATATTTTAAGAGCAAATCTGAGACCTGGTT Gene GeneID:506902|ISM1:NM_001163935:11_cdna Constitutive 0 NULL GeneID:506902 13 GENE ISM1 NULL isthmin 1 homolog (zebrafish) EMBV3_30673 TTATTTCCGGAGACCTCTTCCTCCACTTGGGTACTACTTTGTTTTGGTGTCAACGGCCGC Gene BVT0102_333355 + 0 NULL GK000019.2:27588816-27589892 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096128 TCONS_00096130 TCONS_00096129 1 XLOC_057887 Coding TCONS_00096130 XLOC_057887 Coding Coding CTDNEP1 19:27586238-27596032 j TSS71499 3646 1 TCONS_00096130_3 244 11 0.628816501582763 1.26893740186135e-12 2.97715837368954e-09 0.000130022514161098 0.000102265121551681 2.12463258959928e-08 2.59852479337513e-09 0.000110375232017576 1.94169965878775e-07 0.000101842533749224 0.000109199912795707 1.53317209257812e-10 1.17895780622884e-09 0.000353160577323727 0.000405862613220753 0.000419903825759291 9.18147906744506e-13 2.49507832870138e-11 3.27362114231962e-30 2.19138928312391e-09 0.000839895868643396 2.38495770038345e-19 2.70519855468922e-28 2.12305631978234e-11 6.83445868741644e-26 0.00227876038183863 1.52456044189975e-08 0.000407435767835786 1.74435615244479e-09 6.09860466328475e-06 1.14031083219199e-11 NM_001046026.1 CTDNEP1 Bos taurus CTD nuclear envelope phosphatase 1 (CTDNEP1), mRNA. 0.0 2984 99.88 0.454744925946242 NM_001143775.1 CTDNEP1 Homo sapiens CTD nuclear envelope phosphatase 1 (CTDNEP1), 0.0 2453 92.96 0.455293472298409 TCONS_00096130_3 sp|Q1RMV9|CNEP1_BOVIN CNEP1_BOVIN CTD nuclear envelope phosphatase 1; 2e-178 495 100.00 0.995901639344262 1 coding 1 1 1 1 -1.20104048750177 0.00428481338346511 -0.0599803560481429 0.594193613076874 CTCCCCCAATTCTCCATCCCCTTCCCTCCTGGTCTCGGAGGACCCCACTGTAGCCCGACCTGCCTCGGCCCGCAACCTCGGCGAAGCCGTCAGTGCCACTCCCCGCCCATGTGGGCCCCCGCGGGCTGCCCACGCCTGTCCCCCAGCTCCCCGTTCCGCTGGGCTTTCCCCTCGTCGTGGGTGGCTTTGTGAGCCGCCCGCTCCGTGCCCCTCTCTGCAGCCTCTTCTGCCACTCGGGGCCCCCGTTCCCCCTCCCGGTGGCGGGGGGCTGCCCCCGGGGGGCTGGCGGAGCTGGGCCGCGGGGGCCCCGGGGCCGGCGGTGCCGGGGTCATCGGGATGATGAGGACGCAGTGTCTGCTGGGGCTGCGCACGTTCGTGGCCTTCGCCGCCAAGCTCTGGAGCTTCTTCATTTACCTTTTGAGGAGGCAGATCCGCACGGTAATTCAGTACCAAACTGTTCGATATGACATCCTTCCCTTATCTCCTGTGTCCCGGAATCGGCTAAGCCAGGTGAAGAGGAAGATCCTGGTGCTGGATCTGGATGAGACACTTATTCACTCCCATCATGATGGGGTCCTGAGGCCCACAGTCCGGCCTGGAACGCCTCCTGACTTCATTCTCAAGGTGGTAATAGACAAACATCCCGTCCGGTTTTTTGTACATAAGAGGCCCCATGTGGATTTCTTCTTGGAAGTGGTGAGCCAGTGGTACGAGTTGGTGGTGTTCACAGCAAGCATGGAGATTTATGGCTCTGCTGTGGCAGATAAACTGGATAATAGCAGAAGCATTCTCAAGAGGAGATACTACAGACAACACTGCACTTTGGAATTGGGCAGCTACATCAAGGACCTCTCTGTGGTCCACAGTGACCTCTCCAGCATTGTGATCCTGGATAACTCCCCAGGGGCTTACAGGAGCCATCCAGACAATGCCATCCCCATCAAATCCTGGTTCAGTGATCCCAGTGATACCGCCCTTCTCAACCTGCTTCCAATGCTGGATGCCCTCAGGTTCACCGCTGATGTTCGTTCTGTGCTGAGCCGAAACCTTCACCAACATAGGCTCTGGTGACAGCTGCTCCCCCTCCACCTGAGTTGGGGTGGGGGGGAAGGGGAGGGTGAGCCCTCGGGATGCCGTCTGATGCCCTGTCCAACGGTGAGGACTGCCTGGGCAGGGTCTGCCCCTCCCACCCCTCTGCCCTGGGAGCCTTGCACTCCCTACGGAGTCTGGATGGACACAAGGGCCAGATTCTGAAGCAGCCTCACTCTAACTTCGTGTTCGCACTCCTGGAAACCCCAGACTGGGACATAAGCGGAGACCTAGGAGAGCCGCAACAGTGTCTGGTGGAGAGATATGACTGGCCAGAGTGAGAGAGACATTCGGTAATCCGGGAGGCTCAAAAGAGAAGCCAAGCCAGCTTTGTTGTGATTTGATTTTTTAAAAACTCTTGTACAAAACTGATCTAATTCTTCACTCCAAGGGCTGGGCTGTGGGTGGGAAACTGGGATTTTGGGCCACTGGACTTCCCCAGACTTGTCCCCTCCCTTACTTTCCCTCTATTTGCCCTTCCTCCTAGATTCCCTCAGATCTGTAACCAGCTTTCTCTCTCTTTTTTCCTTTCCTCTCTTTTAAACCATGCATTATAACTTTGAAACCAAAGCTGCCCTAGGTCCTTCTCTGGGGTTTGGGAAAATGAGGGAGGGGTTTTTGTTCACATCCACCCTGTCCACTAGGCAGAGAGAGAAGAGCCTGCTGTAGACCCTAAGGGTAAGGGGAAGGGTCTTAGCGACAGGATGGGCACCCTGTGTCCCGAGAGAACCTGAGCGTCAGTGCAGTAGGACGAAATATTAAAGGAGTAGAAACCTCGACGACAAGAAAGGCTGGGCTTCGTCTGGAAGACTGGCATGTACTAGCTAAGCAGGCGCTTCCTTCGAGCGGCGGGCTCCCCAGCCCCTGGCTGGCCCGGCCCCACGTCCCCACCTCCCCGCGGCCCTCCTCCCCAAGCCCAAGCCGGCTCTACTTCCTCGCGCCCGCCACGTGACGCTCCGCCCTTTGAGATCACATGATTTTCACGGACACACAGCAGCAGTGTTCTTCCGCGCTGACGTAGTCCTTACCTTTCAGACCTCCTCTCCACTCCCTTTGGTCCACTCATTACTGGAAGTTAAGCGCCCAGTGCGTCTCTCTAAACACAGGTTTTGTTTTTGCCCTCCTTTATTTCCGGAGACCTCTTCCTCCACTTGGGTACTACTTTGTTTTGGTGTCAACGGCCGCCTTCAGCGTACCAACAGATTTCGTGAATAGCTATCCATGTAATAGTAGAAAAGGCTCCTAAAGCTCGGATAGGAGACCTGGACAAAAAGAAATACCTGGTGCCTTCTGATCTTACAGTTGGTCAGTTCTACTTCTTAATCCGGAAGCGAATTCATCTCCGAGCAGAGGATGCCTTGTTTTTCTTCGTCAACAACGTCATTCCGCCCACCAGTGCCACGATGGGTCAGCTGTACCAGGAACACCATGAAGAAGACTTCTTTCTATACATTGCCTACAGTGATGAAAGTGTCTACGGTCTGTGAAGCTGCTGCCCCTAAAGTGGGGGGTCCCATTCTACAAAGAGAGAGGTGGCCCCCCTTCCTTGACCTACTCCTCCTTGAGGTTCAAACACCACCTCCCTTCTTCAGGACCTGCACTTCCTAATGTTTGAGACTCTCCTATAGACCCTCTTAACACAAGGGTTAATGGGGGAGATGGCCTCTAATACCTCCCCTTTCTTTCTTCCCCTTTCTTTATCACCTTTCCCATTCTGCTTTAGACTTCTTGATTGTCAATCTCTGTCACATCTGGTAATTGTTTTGGTTTCTGTTCCCTTTCTAACTGCCCAAGGGGCTCAGAGCCCCAACAATCCTTTCTTTTCACTACCTTCTTTTTGGGGGTAGATGGAAGGGACTGAAATTGTGGGGGAAGGTAGGAGGCACATCAATAAAGAGGAAACCACCACCAAGCTGAACTGGATTTTTTCTTTGTGTTGTTCCCCTCCCCCTTTTGTTCTCCTCTTCAAGTGGTGGGGAAAGAGTAGGTTAGAGGTAATAGTATATTTTGGTTTGTTCTGCGTATGTTGGGCTTTTCCTTGTGTATATAAAGAGAGTGCTTTTGTTGTGATGGATGGAATACTGAATATCATTTCATGAAAGTTCAGTTGTATATACGTGTATATGGATTGGGTCCTGAGGTTATTAAAGTTTTTTACAGTGGGTTCCTGTGGATAAAGTTTGAAAGCACCTGCTTCAGATAAAATATCCAACTGTGTCGTAAGTTTTTGGATTAAGGAAGAGATTTTCGAGTATGGGAGCTAGTGAAAGGACTCCGTCCTCAGATGTATGTCGCTTTGCCAGGCTTTGTGCCGGCGTGAGGGATCCAGTGGAGTAGAATCCAAGGGAGGGAGACAACTGGGAGGAGGGAGCCATTATCACCAGGAGAACTTCATCTCCCAGCAGCCTTCCTCTGTCTGGCCGGAAGTGGGGTGGTCCCCGCGGGGATATAAAGCCGCAGAATTGAGGCAGTATGGTGGCCGAGAGTTCTAATCCCTTCTTCCCGTTCTTTCTTAGCTCCGCCTAGCCTACATTTCCCAGGAGCCTGCGCGCACTCT EMBV3_40350 AATGCCATCACCAGTTCATACAGCTCCACAAGAGGTTTCCTACAGCTCCAGAGGATGGGT Gene GeneID:100125913|LOC100125913:NM_001105484:2_cdna Constitutive 0 NULL GeneID:100125913 7 GENE LOC100125913 MGC152303 hypothetical protein LOC100125913 EMBV3_14371 CTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCGCCTCCCCCTCCAGCTAAA Gene GeneID:529296|FCHSD1:XM_002689240:116_cdna Constitutive 0 NULL GeneID:529296 7 GENE FCHSD1 NULL FCH and double SH3 domains 1 EMBV3_08086 GGGCCCAAAGGTGAACTTCTGAGGAACCGGAAAGGTTAATATGGTTCCAATCGCAGAGTT Gene BVV0102_198919 - 1 EMBV3_00303 GK000023.2:7434187-7470094 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41770 AGAAGGTGGGGGTAGAAAGGATGGAGGGATAATGGCTTAATGGGTACCACCCTGCCTCTA Gene BVV0102_012964 + 1 EMBV3_16950 GK000026.2:41930656-42041589 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16442 CGAGATCCACCTGATCCGTGACATGATGGACCCTCTCCACACAGGAGGCCTGTATGACTT Gene GeneID:506969|ALS2CL:NM_001102488:95_cdna Constitutive 0 NULL GeneID:506969 22 GENE ALS2CL MGC155060 ALS2 C-terminal like EMBV3_20878 ATCCTTGGTTGGGGAACTAAGATCGTACACAGTGCGGAGCAACGAAGCCGACAAATCACA Gene BVT0102_134417 + 0 NULL GK000018.2:65720586-65732472 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00320 CAGCCCATTGACTCTTCAGCACTACAGGGTCACAATCTTAGCTTTTCATTTTCAATCTGG Gene GeneID:100336729|LOC100336729:XM_002698448:445_cdna Constitutive 2 NULL GeneID:100336729 26 GENE LOC100336729 NULL CG8379-like EMBV3_04547 CCGTTCTTGGGTCTAGGGGGTTAAAGGCTAAGCGCCCTCTTCCTACACCTCACATCTATA Gene GeneID:513349|DEF8:NM_001098957:222_cdna Constitutive 0 NULL GeneID:513349 18 GENE DEF8 DEF-8 MGC159824 differentially expressed in FDCP 8 homolog (mouse) EMBV3_18813 ACTTATCACCAAGATCGGCTTGGCTGCTGTGACTCGGGCTGTGACACTAATGACTCCACT Gene GeneID:509152|LOC509152:XM_002693410:88_cdna Constitutive 0 NULL GeneID:509152 15 GENE LOC509152 NULL similar to olfactory receptor 552 EMBV3_25705 CTGCTGCTCGGCTTCAACCTGCTCTTCTGGGGCTCTATGTGCTGGTTGGAGCAGGGGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10881 GTGAGGTTGCCAGGCCTACTGATTCCAAATCCATGAAAGTGGTGAAGCTGTTCAGTGAGC Gene GeneID:523435|MRPS33:NM_001037605:679_cdna Constitutive 1 NULL GeneID:523435 4 GENE MRPS33 MGC133550 MRP-S33 S33mt mitochondrial ribosomal protein S33 EMBV3_23877 GTGAAAGGAGGCTACTCCGGCCTCAGGGACGTTTACTTCACCAAGGAGAGCTACGATGAT Gene GeneID:530027|MAN1A1:XM_002690078:5_cdna UTR3_Alt 2 NULL GeneID:530027 9 GENE MAN1A1 NULL mannosidase, alpha, class 1A, member 1 EMBV3_38486 CGAAGACTTTCTGGAGATGGACCTGGGGAAGACCGAGCACAGAGCTCCTGCAAGAACGGA Gene GeneID:529171|SLC16A6:XM_002696231:60_cdna Constitutive 0 NULL GeneID:529171 19 GENE SLC16A6 NULL solute carrier family 16, member 6 (monocarboxylic acid transporter 7) EMBV3_20204 TCCGCGTACGATGAGAAAGGTATGCCAAAGAACTGGAAGGCTCGGTTACTCAGAACTCTG Gene BVV0102_098742 + 0 NULL GK000030.2:50553674-50718613 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244340 1 XLOC_150433 Coding TCONS_00244340 XLOC_150433 Coding Coding - X:50706428-50708017 - TSS183654 923 1 TCONS_00244340_2 200 3 0.420654911838791 0 0 0 0 0 0 0 0 0 0.000303639843531183 5.68188451094692e-05 3.75383690176749e-11 0 0 0 0.00145163177640498 1.87070684397714e-05 1.20790314717024e-183 0 0 0 0.00040522938326057 0.00278493347039804 0.00249638960392823 2.46175214069369e-25 0 2.35674469878564e-10 2.67717158895505e-12 3.1836857756369e-08 0.00039332036465116 XM_005200686.1 LOC101902960 PREDICTED: Bos taurus cancer/testis antigen 1-like (LOC101902960), 0.0 1436 100.00 0.861321776814735 NM_172377.4 CTAG2 Homo sapiens cancer/testis antigen 2 (CTAG2), transcript variant 1, 1e-11 75.2 73.02 0.135427952329361 TCONS_00244340_2 sp|P78358|CTG1B_HUMAN CTG1B_HUMAN Cancer/testis antigen 1; 3e-13 66.2 40.00 0.5 1 coding 0 0 0 0 -0.282554833445212 0.157822283842461 -0.0530254901305241 0.395822293994104 TTTCCCGACGCAGAGGGAGGGGGAGAGGGCTTCAAGATGGAGTCCGAGGCACATGGTGGAGGAGCCATGAGGGCAGCCGATGAAGACGCAGGTGCTGTGGCCTCTGCAGCGGGTACAGCACATGGCGGCCAAGGTGTGCCGGGTGGTGCTGCTGGCCACAATGGCCCTGGCATCCCAGCTGGCCCTGGAGACGCCGTCAGTCGAGAAGTCCCTGCCGGCTCCGGTGACATGGCTGATCCCAGAGGCCCCAGCGCTGCCGGAGAGTCAGGTGGCGCAGCCGCTGCCATTCCGCAGATCCCAGGGGCACCCAACGCACCAGGGCCTGGTGGAGACACCGCACCCGGAGCCAGAGTTCTGAGTAACCGAGCCTTCCAGTTCTTTGGCATACCTTTCTCATCGTACGCGGAGGCAAACAACGCGCGCCGCATCCTGACTCGACTTACTCAACTGCGATGGCCGGTTCAGAGGGAGCTTTACATTAATGGCCGCATGTTGGTTCTCCGATTGACTGCTGAAGACCATGCCCTGCTCCAGATGGCCATCCGCTTCTGTCTGGAGCAGGCTTCCCTGGTGATGTGGATCTTGCAGAACTTCGTACCCCACCTTTTTCCTCAGTCTCAGCACAGAAGAGGGCCTTAAAACTAGCCTATGTGCCCTAGTCTCAAGTATCATTCCCAAGGGCATTGCTTTCTGCAGTAGTTTGATCGGGCTTCATCTTGTGCCTGTGCTGCTGCTTGTGGGCTCAGGGTCCACATAGTTTTTTGGGGATTGTGAACTGCAGAAAATAAAAGTGAGCTGTCTCTGACTTTAGTTTTGGCTTGTTCACTTCCTAATGTTGCATTCATCTTCTGGTTGGAGGGAAGGTTCTCAGATCCAGATATCCAAGGAGTACAACCCAAGCGAAGACGATGTATGTAAGAAGT TCONS_00244341 s 5' 10597 TCONS_00244341 s 5' 12185 EMBV3_27650 CCCCAAAGGTGTGAACATTGGTGATGTGGGCTGCTACATCTATGACCCCGTGGAGATAAA Gene GeneID:530071|CRIP3:XM_002697254:464_cdna Constitutive 0 NULL GeneID:530071 23 GENE CRIP3 NULL cysteine-rich protein 3 EMBV3_11990 GCAACTTAGCTTCAAGTGAGCAGCTCCGTGACTGACAGTTCACCAAACGCCTCCAACATT Gene GeneID:535365|GNB5:NM_001099070:89_cdna Constitutive 2 NULL GeneID:535365 10 GENE GNB5 MGC142963 guanine nucleotide binding protein (G protein), beta 5 EMBV3_08269 TCATCCATGACAAGAAGGAACAGGCCAAGGTGTGGATGATCGACTTTGGGAAAACCACGC Gene GeneID:540877|ITPKB:XM_002707735:231_cdna Constitutive 0 NULL GeneID:540877 16 GENE ITPKB NULL inositol 1,4,5-trisphosphate 3-kinase B EMBV3_29605 CACCACTGATGAAGAGGAGGAACAAGCAGCGCTCACCAGGCCAGAAGAGTTATCCTACAA Gene GeneID:504974|OSCP1:NM_001045904:68_cdna Constitutive 0 NULL GeneID:504974 3 GENE OSCP1 MGC137961 organic solute carrier partner 1 EMBV3_39603 TCAGGAGATGCCTGATTTCCATGAACTTGCACCGTGTGGAGGAGAGCTTCCGAGGAATCA Gene GeneID:527634|IL19:XM_002693891:206_cdna Constitutive 0 NULL GeneID:527634 16 GENE IL19 NULL interleukin 19 EMBV3_27961 CGGAGCCCTTTCTTTGCTGGGCCGTTCTGGGTGAAAAATTAGATAATTTTCAAAGCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04078 CCATTCAACTGATATTTATTGAGCTTCTGCTCCATGCCAGGCACTGTACAGGGCTAGAGA Gene GeneID:521748|TNFSF9:XM_002688880:113_cdna Constitutive 1 NULL GeneID:521748 7 GENE TNFSF9 NULL tumor necrosis factor (ligand) superfamily, member 9 EMBV3_06516 TCCTGGCAAATCGACCACATGGAGGCGAAATGTCCCTGGAAATACCACTCTTTCCTTCGC Gene BVT0102_012601 - 0 NULL GK000026.2:13903023-13920367 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151495 TCONS_00151500 TCONS_00151499 TCONS_00151497 TCONS_00151494 TCONS_00151501 TCONS_00151492 TCONS_00151498 TCONS_00151496 TCONS_00151493 1 XLOC_092125 Coding TCONS_00151492 XLOC_092125 Coding Coding IDE 26:13916320-13938937 j TSS113240 5457 1 TCONS_00151492_3 371 0.0577240241891149 11 0.759197028652282 0.000110826226547212 4.16492717783416e-06 2.87147691105679e-05 0.00136789543051415 3.75107879163813e-06 5.66309460307286e-19 0.00136483705200257 0.00200939544576021 0.0018810684109083 1.04667408433235e-37 0.000201700181977799 0.000156644824289737 0 4.35159832414639e-11 3.52394340937633e-121 0.00522323793931996 0.00557488889629929 0.00108552991409786 0.00383682139622458 0.00497292105687159 0.000855561407721502 3.92353915159659e-07 0.00209268204929069 0.000684822971485499 0.000407138832454618 0.00193387899403436 0.000880335137170144 3.87432104009902e-06 0.000610885840986479 1.37837785175351e-06 XM_005225416.1 IDE PREDICTED: Bos taurus insulin-degrading enzyme (IDE), transcript 0.0 6040 100.00 0.613523914238593 NM_004969.3 IDE Homo sapiens insulin-degrading enzyme (IDE), transcript variant 1, 0.0 3992 82.57 0.709180868609126 TCONS_00151492_3 sp|Q24K02|IDE_BOVIN IDE_BOVIN Insulin-degrading enzyme; 0.0 773 100.00 0.997304582210243 1 coding 0 0 0 0 -0.736904356242786 0.0910012150580514 -0.064563724272317 0.217895940675241 CTTAGAAATTCTTTTAGAACATTAAACTTAAAATACTTTCTATAATTAATGTGATTTAATGAGAACTTGAATTTTGATGATACAGTGCATGCTGCCATAGTTTGGCACCAGCTCTCGGTGAAAGGTTACAATGACAAGCAGCCAATTTTGCTAAAGAAGATCATTGAGAAAATGGCTACCTTTGAGATTGATGAAAAAAGATTTGAAATTATCAAAGAGGCATATATGCGATCTCTTAACAATTTCCGAGCTGAACAGCCTCATCAACACGCCATGTACTACCTCCGCTTGCTGATGACTGAAGTGGCCTGGACTAAAGATGAATTAAAAGAAGCCTTGGATGATGTCACCCTTCCTCGCCTTAAGGCCTTCATACCTCAACTCCTGTCACGGCTGCATATTGAAGCCCTTCTCCATGGAAATATAACAAAGCAGGCTGCGTTAGGAATCATGCAGATGGTTGAAGACACCCTTATTGAACATGCTCATACGAAACCACTTCTTCCAAGTCAGCTCGTTCGGTACAGAGAAGTTCAGCTCCCGGACAGGGGATGGTTTGTGTATCAGCAGAGGAATGAAGTCCACAATAACTGTGGCATTGAGATATACTACCAAACCGACATGCAGAGCACGTCAGAGAACATGTTTCTGGAGCTCTTCTGTCAGATCATCTCCGAGCCTTGCTTCAACACCCTGCGCACCAAGGAGCAACTGGGCTATATCGTCTTCAGCGGGCCACGCCGAGCCAATGGCATTCAGGGCTTACGGTTTATCATCCAGTCAGAAAAGCCACCTCACTACCTAGAAAGCAGAGTGGAAGCTTTCTTAATTACCATGGAAAAGTCCATAGAGGACATGACAGAAGAGGCCTTCCAAAAACACATCCAAGCATTAGCAATCCGTCGACTAGACAAACCAAAGAAGCTATCTGCAGAGTGTGCTAAATATTGGGGGGAGATCATCTCTCAGCAGTACAATTTTGACAGAGATAATATAGAAGTTGCCTATTTGAAGACACTTACCAAGGAAGATATTATCAAATTCTATAAGGAAATGTTGGCGGTAGATGCCCCGAGGAGACACAAGGTATCCGTCCATGTTCTTGCCAGAGAAATGGATTCTTGTCCTGTGGTTGGAGAGTTCCCATGTCAAAATGATATAAATTTGTCACAAGCACCAGCCTTGCCACAACCTGAAGTGATTCAGAACATGACTGAGTTCAAGCGTGGTTTGCCACTGTTCCCCCTTGTGAAACCACATATTAACTTCATGGCTGCAAAACTCTGAAGATTCCCCATGGGCGGGAAAGTGCAAGTGGATGCATTCCTGAGTCTTCCAAGGGCTAGGAAAACCATCTTGGCCACTTTAATAGTTTCTTGTTCACTATTAGAGACATACAGAGGAAAAAAAGAAAAAAAAAAAAACTTGTCAAATGTCATTATGTAGAAATATTAAAAATCCAGAGTAATTAAATTACAAAATCTTATAGATGTAGAATATTTTTAAAATACATGCCTCTTAAATATTTTAAAAGTTTTCATTACTAAGAGAAATGTCCCTTATATAACAATACTTTAAATGATGAATGATATTCCTATAGAATCTTCCTTCTTTATTCTGTAAAATAGTCACTTGTCAGAAGGAAAATATGTTAGCTTTTTTCTAAAAGCCTCCTAGGTTGACAGAAAAGACTTCAAAACATATAGAAAGGTGATACATTTTTAAAAATTGATTCTCGTTTGCTTTCTACTTAATAGTTTCATGTAAATAATGGAGAACATTACATTTGGCAGATAATGAACAAAGCAATGTAATTTTCTTTTATTAGTGAAATTGCTGATTAAGGCATGGTTTTAATCTTTTTATAAAATTTGAACATGTTTTTTATTCAAACAAGTAAAATGCTGGAAAACTCTAGAACACCCTACTTATTTACAGTGCTAGAAATACAGACTTACCTGGCATCAATTTTGTCCCAAACTGAATTTCTCAGGATTACTGTGATTTGTTTCTTTCTGATTGAATCATATTGACATTCTTGTTCATAGTTGGTTTGCAGTGTTCCATCAGTGTCACTTTTTTCCCATCAACACATTGCTGTATTTATTTAACTTCAGATCCCACTGAGTGTGTGACATGCTTTTCCAACATCAGCTGCTCTAAATGTCTGTAACTTTTTACTATGGCGAAATCGCAGGCAGTATTCCAACCAAAATATCTGTCCCGTTGTGAATATAAAAGGCAGCGTGTACAAAGACACCTTTTTGGGGGTACAAAAAGGAAAGCCTTGGACTCTTAAATAGTGTGATCTCCATAGAGACACTAAATCCCCGTTTTGCTCCCAGTCTAATATTGCCTTAAGTGTTAAGTTGTTTTTTGAATATATACATACAAACACACAGATGATGACTGGAGTGAGCTTTTAAAAAATATCTTCTCTTCATGAGATACAATTATAGATGAAATTGTTACCGTATATTTAGCAGCCATTTTGAAACATTTACTGTTATTAAAACTTACAGGGAAATTGGAAACACACAGGTACTAGCAGCAGTAAGTGGGCCTGTCGTTGACTGACTCAGGCGAAGGAAAGAGTGGTATTTCCAGGGACATTTCGCCTCCATGTGGTCGATTTGCCAGGACTGCTTTCTGTAGAGTCACGTCTCTTTCACATCTTAAGTTTCACATTTGCCATTTTTCCAAATAATCTGAATTTGGGGCAAGAATGATAATCACAACCGTGGAGGCTGCTTTTGAGAGCGGGGCTCCATTTCTACTGTCAGATAAATGTGGTGCTGTAACTGTCTTTTTATCCCTACCTTCAAGAGCTTCCTTGTACGAAGCTTGTCTTTGTCCATCAGAAGGTGTGTGAGTCACCATCACTGCCTTCTGGTTTTATGCATTTGTAGACTATGCAGCTTTTCATCAAACTGCAAATATATATGAGAGGGATCAAAAATGAGTCCTGAGTGTATAAATCTACCACTGGAAGAGTAAATAACCCACCTAAACCTTTTCTGTGGAAAATTATGTGCTATTGGGTAACTTAGCTCTTTACAAAAAAAGTGGGGGGTGAAATTTGAGTGTCATTTTTATGGGAAAGTCAAGTGAAGCGCTCTGAGGGGCATCCCAGGTAGTCTCCAGGAAAGTGAGGTTGCTGGTGAGTGTGCTCCAGTGTTGTCTGCTGTCCACGTAGGACCTCCAGCCACTGTTGGCTCACTCAGGCTGACTTACACATTCAGCTAAATAGGTCCAAATTGTAGTCCATGAGCAATAACAGACTGCCTGGACGCTGCTCTTTCCTCAGTGTAAGGGAGATTTGTGAAACATTCAGGTGTCGTTACCCGTGACTTTTTAAAAAGTCTTTTTCACGAGTTGATGTGGAAGAGAGCATGTGACACAGCCAGTAGGTGGTGGAGTGCTAGGGTAATCCTGTTTACAATAAATTGCCTGATCTTCACCTCTGGAGTTTGTATTTGTATTATTTTACAGTTTTCAGTGGCCGATCCTCAACCTGCCTCAACATCCCGATTTGACAGTGTTTCTTGCTTTTTCGTTGTTCCTAATGCAAAAAGCAGTGGGTTTTGGGGGTTTAAGTGAATCTAGGTAAAAGTGATTTACTGTTACCTCTTGAGTCAATTTCACAGTCTTAAGAACAGATCACTCTGGTAAAATAGAAATCTTGATGTTAGAGGCTGAACTCCTTGCTGTGAGTGTTGTCATTGACCCCAGATCCAGAAAGATTTGTCCTGGGCATTACAGGGAGGAAAATTTTAAAGGTAGAAAAAAAATCTCTCTCCTCTACAGCTAGGTTTCTGCATCTTCCTGCCACACCTTGTCCGATCCCTGGCTTCTTACTCCCTGGTCAAAATAATCTTTCTACTCAGGTGGTTACCAGCTGGCTCAACAGGGCTTTTCAAGAGGAACTCTGCTTGTTAGTCAGTTTCCAACCTAGGACAGTAGAGCATGGCACACAGTCAGCTTTGTGCTGACTGTGTGCAGCACAAAGGGCCGCGAGCCACCCCAGGCTTTGTGAGTTGGTGCAGTTTCCCCTCTCTCATGATGCAGTGTGTAGGGAATCACCTGGTCTCCTCCCCATGATTGCAGAATGTTTATAGCATAAACCAAGGATTCTCACATACTCATCTTCCCTTGTAAGGGTGTTCCTGCCCTCTTAACCCCGTAGGCTTCTGAATCCCTAGTATTCTGTGCTGCCCGTCTGATGTTCATTCATTGACCTTGTCAGCCTGAGCATGGAACACTCCATGGTGTCTTGTGGCAAAGCTTATTAGTGGTATGAATTGCTACTTTTCTCTCTTCAAAGACAACAACAGCATTGTGAATAGTTCATACCCTAAATTAACATTAACTGACATCGTAAAGCACTTTATAGATCACCCTCACAGACATCTCCCACAGTCGATCTTTCATAGTAATCTTTTTGAAATGGGAGGATGGTGATTAAAATCATCATCATCCTCATCTCAGGTTTTCAGAGGTGAAAATAGGCTCAGAAAGTTTGAACAGTTTGCCCAGGACCGTGTGGGAAGCACAGATTCAAACCTCCACTCAGATCTTTAAACGCTAGTTCTCATTGTTCCATGTGGATTTCTTGTAATAATAGGTGGGTGGTGTTCAGTTGCTGAGTCACTTCTGACTCTGAAACCCCATGAACTGCAGCACGCCAGGCTTCCCTGTCCTCCACTATCTCCTAGCATTTGCTAAAACTCGGATCTTGAATCACTAGTTCTCATTGTTCTATGGGGATTTCCTGTAATAATAGGTACCAAGTCTATTAAGGTACCTGTGGAACAAAATAGAAAGGTGGTTACCTTTACACTTGTATGAAGCTTTATTTTTTTCACAGATAACCTCCTTAGTCTCCCAACCTTCACCTGTTTCGAAGGGAGTAAAACCAGGTCTCAGGGTCTGTGTGGCTGTCCTCCCGTCCAGCCTGTGTCATTTCCCCTCTACTGGGCTCCCCTGTGGCCAGGTAACCACCACAGCATGCAGGGTCTCCCTCCCTCTTGGAGTTAATCCAGACCCACACCTCCTGACCTGCTCTTAACTTAAGTTCTCCTTCCTTTCGCCCCTGGAGTGATGAGAAGACCTGGAATCCTTCAGGAAATTCTGAACAAGGATTATGAAGAAGAGTCAAGTTCACCTGTAACCCACCACTCCAAGACAGCCATGGGTTTTTGGTTTGTTTGTTTGTTTGTTTGTTTTTTGCATTTTTACTTTGCAGTCTTTTCCTCATGCATGTAGACTGGGGTCATATATTCAGTGTTATGACTTTTCCCTTCCATTGTCTGTCTATATTGGATAATCTTGGGAAAATTGTGATATCTGTTGTTGTTGTTGAGTTTTTCATGTCTTATACTGTAGCTTGTTTATCTGATCCTCTTTGTGGGATGTTTAGGGTGTTTTCAAACTTTGATCCATGATAAAACTCCTTGT EMBV3_34663 AATCATAGCAAAGTATTCATGTGTATTTCTGGGTCTGAAAAGACAGAATTCACTTCTTGC Gene GeneID:767877|CCDC152:XM_002696362:36_cdna Constitutive 1 NULL GeneID:767877 20 GENE CCDC152 NULL coiled-coil domain containing 152 EMBV3_32725 GAACGATCCACCCGAGAGCTGTGTCTCAACTTCACCGTTGTCCTGATTACAGTCATCCTT Gene GeneID:100296455|LOC100296455:XM_002692953:52_cdna Constitutive 0 NULL GeneID:100296455 15 GENE LOC100296455 NULL hypothetical protein LOC100296455 EMBV3_09092 CTCCAAGACCTGAAGGACATCACCCACAATGTCCACTATGAGAACTACCGCATCATCAGA Gene GeneID:618676|SEPT12:NM_001098143:321_cdna Constitutive 0 NULL GeneID:618676 25 GENE SEPT12 MGC148331 septin 12 EMBV3_13224 GTTGTCAGCTAAACCAGCTCCTGCAAAAGTGGAAGCTAAGCCAAAGAGGGCGGCAGGAAA Gene GeneID:785479|HMGN1:XM_002697394:59_cdna Constitutive 0 NULL GeneID:785479 23 GENE HMGN1 NULL high-mobility group nucleosome binding domain 1 EMBV3_42774 TCCAATGCACACCAAACCACACTGGCCACATGCTGAGGGCCAAGTACCCACAAAGATGTC Gene GeneID:520157|HIPK4:XM_002694990:185_cdna UTR3_Alt 2 NULL GeneID:520157 18 GENE HIPK4 NULL homeodomain interacting protein kinase 4 EMBV3_30440 GGGACAGGCTGGTTTTCATCCCCTGCGTCTTTGTGCTTATTTCCTAAAGGCCTGGGAAGA Gene GeneID:532791|KEAP1:NM_001101142:75_cdna Constitutive 0 NULL GeneID:532791 7 GENE KEAP1 NULL kelch-like ECH-associated protein 1 EMBV3_31271 TGAGACTGAAGACTCAGATGCAGTAGCTAGTTTTTGCAAGGGGCATCTTCTGAACATCTG Gene BVV0101_016694 + 0 NULL GK000001.2:42047504-42057390 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00775 CCTTTTGGAAGAATATACCCAGCTTGCCAGGGTCAGTAGTGGCCACCTACAGGAAGACGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03116 CTCCAGGTAGGTGAACTTTTCAGAACCTCTTCCCCCATGTGACAGCTGCCGCCATAGCTA Gene BVV0101_062788 + 1 EMBV3_40941 GK000017.2:2063781-2523017 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15983 AGCTGGCTGCAGTGTACCAGGGTATCTCTGTGTCTCCGGAGTCCTGTCTGTTGCCAGAAA Gene GeneID:615145|MESP2:XM_002696577:199_cdna Constitutive 0 NULL GeneID:615145 21 GENE MESP2 NULL mesoderm posterior 2 homolog (mouse) EMBV3_22622 AAGGCTTAATCTAGACTTCCTAACATGGCAGCTTCAAGGGCAAAGTGGAGGCTGCAAGGC Gene BVT0101_000026 + 0 NULL GK000002.2:25720830-25772946 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37143 GGCACACTTTCACGACGCTGTAACCACAAGGATGTAATTTATTCAGGGGGCGCTGGGACT Gene GeneID:404169|PKIG:NM_205812:817_cdna Constitutive 0 NULL GeneID:404169 13 GENE PKIG MGC142687 protein kinase (cAMP-dependent, catalytic) inhibitor gamma EMBV3_00285 CTAAAACTAGTCACATAAATTTAAGATCCAAATTGCCTAACAATGTGTCCTCACAGCAGG Gene BVT0102_055902 + 0 NULL GK000014.2:17627185-17665115 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052852 TCONS_00052854 TCONS_00052856 TCONS_00052853 TCONS_00052855 TCONS_00052849 TCONS_00052850 TCONS_00052851 1 XLOC_031592 Coding TCONS_00052849 XLOC_031592 Coding Coding FAM91A1 14:17662755-17692673 j TSS39132 4842 1 TCONS_00052849_3 595 0.0287071458075176 18 0.838753885750577 2.93202675024203e-05 0.000162676657258962 1.60533556049662e-08 3.7539286679537e-26 8.97624588787457e-05 8.95866007476112e-05 3.37266873694085e-08 4.67004046399523e-30 2.16392580129776e-07 4.43713439888536e-05 1.16760489857778e-05 7.03913376843135e-05 3.93842001659838e-06 2.32994158795909e-13 1.27694219227179e-05 0.00485889632045403 4.40338407088284e-09 0.00465761083709822 4.64456201669435e-13 2.76764799936139e-05 2.39720656211027e-05 0.00255797515210629 0.00254033438249737 0.00417508686901082 3.12714554527521e-05 0.000102386392693106 3.55667627602752e-23 0.000315692235846806 6.82818571599829e-05 0.000658450615169643 XM_005215397.1 FAM91A1 PREDICTED: Bos taurus family with sequence similarity 91, member A1 (FAM91A1), transcript variant X2, mRNA. 0.0 8255 100.00 0.945064023130938 NM_144963.2 FAM91A1 Homo sapiens family with sequence similarity 91, member A1 (FAM91A1), mRNA. 0.0 5402 86.03 0.947129285419248 TCONS_00052849_3 sp|Q658Y4|F91A1_HUMAN F91A1_HUMAN Protein FAM91A1; 0.0 1154 95.13 0.998319327731092 2 coding 0 0 0 0 -0.0538096010674559 0.764134480965035 -0.0030910827481244 0.950332196208419 AGTGGTTTATATAACAAAGGATTTGTTTATCTGGATGTACCAATATCTGATGACAGTTGTATAGCAGTTCCTCCTCTTGAAGGTTTTGTAATGAATCGAGTGCAAGGTGATTATTTTGAAACCCTGCTCTATAAGATATTTGTGTCAATAGATGAGCATACTAATGTTGCAGAGCTTGCAAATGTTCTTGAGATAGACCTGTCTCTGGTTAAGAATGCTGTATCAATGTACTGCCGATTGGGGTTTGCCCACAAGAAAGGACAAGTAATAAATTTGGACCAACTTCATTCATCGTGGAAGAATGTTCCATCTGTAAACAGATTAAAGAGTACTTTAGATCCACAGAAGATGCTCCTGTCGTGGGATGGCGGGGAAAGTAGGAGCCCTGTACAGGAAGCTTCATCGGCTACTGACACGGATACAAACAGTCAAGAAGACCCAGACACAGCCAGTATAAACAGTTTGAATCTGTCTACAGGATACACAAAGCGTATCGCGTTCCTATTTGACTCAACACTTACTGCCTTTTTAATGATGGGAAACCTTTCACCAAATTTGAAAAGCCATGCAGTCACAATGTTTGAAGTTGGCAAGCTCTCAGATGAGTCTCTGGACAGCTTTCTTATTGAACTAGAAAAGGTTCAGAGCACTGGTGAAGGGGAAGCACAGAGGTACTTTGACCATGCGCTCACTCTGAGGAATACAATACTGTTTCTGCGTCATAATAAAGATCTAGTTGCTCAGACTGCACAGCCAGACCAACCCAGTTATGGTTTTCCTCTGGATCTCTTGCGCTGTGAAAGCCTTCTTGGGTTGGACCCTGCAACCTGCAGCAGAGTTCTAAACAAAAATTACACATTGCTTGTTTCCATGGCTCCTCTCACCAATGAAATCCGGCCCGTCAGCAGCTGCACCCCTCAGCACATTGGACCAGCTATCCCAGAAGTCAGTTCTGTCTGGTTTAAACTGTACATTTACCACATCACCAGGCAAGGACCACCATCTCTTTTGCTGTCCAAAGGGACAAGACTTCGAAAACTGCCAGATATATTCCAGGGTTATGATCGATTATTAATCACGTCTTGGGGTCATGATCCTGGGGTGGTTCCTACGTCAAATGTGCTCACGATGTTGAACGATGCCCTGACACATTCAGCGGTTTTGATTCAGGGACATGGTTTGCATGGGATAGGAGAAACTGTCCACATACCTTTCCCATTTGATGAGACAGAACTACAAGGAGAGTTTACTCGTGTCAATATGGGTGTTCATAAAGCACTGCAAACATTGAGGAACAAAGTGGACTTGCAGCATTTTTGTGGATATGTCACCATGTTGAACGCTTCTAGCCAACTTGCAAACAGAAAACTCAGTGATGCTTCTGATGAGAGAGGAGAACCTGATTTGGCTTCAGGCTCAGATGTGAATGGGAGCACAGAGTCATTTGAAATGGTCATTGAGGAAGCAGCTCTAGATTCAGCTGCAAAGCAAAACTCTGTTGCCACAGCAGAAGCAGATTGGGTTCCTCTGGAGTTGTGCTTTGGGATTCCACTGTTTAGTTCTGAATTAAACCAGAAAGTCTGCAGAAAAATCGCTACGCATGGCCTTTGCAGAAAAGAGAGCCTTCAAAACCTCTTACATTCCAGTAGAAAACTGTCTCTACAAGTCCTTAACTTTGTTCACTCATTCCAGGAAGGTGCTTCAACACTGGATGTTCACACTGAGGCCAGTTTTCCAAGTTTGCTTTCACAGTCATCCTGTGCTGACATGGGAGTTCCCCTTCCTGCAAAGAACTTAGTATTTAAAGATGGTATCTTAACGGAGTGGAGTGGACGATCACCCTCGTCACTTCTTATTGCTAATCTCCATTTGCAGTAATTTGGTTACATATTTGTTGCTCACCCTTTCTGCCTTTTTTCTTTCTTAACGTTAGCTTTATAGTGCCAGCCACTAAAAAGCTTCCTGCTGCTGCAGTGCAATTTATGCTTAACTGATGTTAAAGTTTGGGGAACTTGTTCATGTTTTCAGAAGTTTTCCTCATTCCTGCACCTCCTAATGCAACAAAGAGCTTTTTAGCAGCCTGCACTGTATTTTTTACCTTGAGACAATCTGCATTTCTTTTATAAAACTGAGGATATACTTTATAGGCTTTATGATGACTGTTATGTTTATAAGCAGTCACTATGAATATTGCAATGGTAATTTTATATGTTAGTTTATCAAACATAAATCTTGTTTAATTTTATATTTTGTTACCTACTCTTTAAGGGATCATGGGAAGAGGTGGAACTCTTCCTCTGAAAAGGCTTCTTGGTATTTAAAGTAGCAAAACTATAAAACTGTTAACATCCATTATTGAGAGATGATCTGATGGGGCATTATGAATTGCTGTGGATATTTGTAAATTATGTATATCAATTGAACATTGTTGAAGGTATGCAAATCAGCATAGTTAGGTATGGCTTAACGTTGACTTAGAAGATCTTAACACCGACTATGACGATACACTGACATCTCATAAGAAGCTTGGGAAACATTCTATTTTTAAACAATGTTTATATGTGGACTTGTGTTGTCGCTCATTTGGGGCTTTATATTTTCATAGAGTCTTTATGGAAAAATCAAATTTATTTTCCACTCTTGTAGCTGTGGCTGCTGCATGTTTTCTCCTTGACTCATTTACCCATGAGTTGTTATGGAATTGGATTTGAGGTTTCAAACCAAGGATTTTGATTTTAGCTTAGAATTTAGAGGCATTAAGGCTATGTCTTCTGATCAAAACATTTTAGTGACAAACCTGCTGTGAGGACACATTGTTAGGCAATTTGGATCTTAAATTTATGTGACTAGTTTTAGACAAAATGATAAAGAAAAATCGAGTAATTTCAAAATGTTTTTCTTGAGTCCTTGATTCTTTTAGTATCTCAAATGTTAATTAGAATAATTGGAATCACTTTTTAGATTTTTCAAATTACCTTCCTTGGGAAGTTTGTGCAGTGTTATAGTTTAGCTCTTCTCATAGAATAACGGTTTGCTAGTTTAAAACTGTAACCAAACTAACTGGTCAAACAGCATATATCTAAAATATTTAAAGCATTAGAAAATTTGGGAAGGTTAAACCTGAACATTTTTGCTGACAATTTTTGTTATTTATAGAACTGATATTTGTGTATTTAACATACTTCTGGAAATATATGTCTTTCTTAAAACTGTTAGCATAACCATGCATTCAATACCATGGCCTACCTATTAAATGTTTTGAAGCAGGTTACCTGTGGCACAGTCAGTGCTGTGTTTGGGGTAAATGCAGTAACGTTTAGTATTCTACTTTGTCTTATATGAGGTGGAAACCAAGTGTATGTTATAAATGTTTGTCTATAAAAGGAAAAATACTAATATTAAAATAATTTCTTATAACTGTGAATCACTCATTTATTTTTCCAATAATTGTACATTCCTAGTGCTATTAGGTATGTATGTAACTTTTATAGTTTTTCACCTGATTGTTGTAAGTATTTCATTTGATCAGGGCTCTTTAATCTCATTTGCTTTGTTCAGATTAACTGTAGTTATTTATTTCTGTATTAACAAGCTAAGCCTATGGTGATGACATGTACACTAATAAAGCATTGAATGTTTGTAGTTGGTAGTGAACCTTGTTGTTGGTGAATTTAAAACTTAAAATATGGGAGTGATTTGCTGCTATATTTCCTTTGAGGGATAATAGAGGAAGAAATGGACCCTAGTAATGATCATGAATTTTAGGGAAAGTACAAAAAAAAGCATGTGGTCACCTCTGGTTTCTCATGTGAATGAGGAAAGAGTCTACTTCCAGCTGAAGACCTCTTATACTTTTAAAGATGGGGAATCTGCATTTTTAGAGCTGTTAGCAAAGTGTGAAAGCCACTTTATGCTTTACTTTGTGGATTTGGTTTTGTTTTATTCATACATTAGCTCATATCGAGATGCATTGCTTAAATCTTATGTGTTGATCCTATTCAACAAAAAATGTAAAATATAGAATTTATTATTTGCCAAAGAAAATTTATGAAAGAATTTTTATCCAGTTTTTCTGCAGACATTTAAATTTCATTTGGCTTTGTGCTCCCTCCCCTCTTTTTTGTCCTTAATGTAGCTTAAACCATTGGCAAACTTCAGAAACCAAGAGAAAAAAAGAAACATAAAAAAAAGACACAGAATTTAGTATGGTACAATTTCACCTTTCACATAGGTCTGAAGAAATGTAACTTTATGTTGTTAAGATCATCTTACTTCCTTGACTCCTTTTTTTCTTTTAAAATTGTAATCAGATGCTTCTGGTTTTTTTTTTTTTTTTTTCCAGGAATAGTGCTTTCTTTTACTTGTTTCCACTTTTCTCTGCCATTTGTGATTCTCTTTTATGTTCAGTGTTTCAAATACAGTTTGTATTTAAAGATTTTAAAATACCAAAACTGTAACTGAGTACAGTGGATTTTTTTCTGGTATGATGTTAATATTATACAATGAAATGTATAAAGTGTTGTCAATTTGATTATTGACACTATAATATGTTTACAAATAAACTGTGGTGTTGATCAAGTTGCTGTGAAAATGTGTATAATCTTCTGTTAAGTCCCTTTCATAATTTAAAATACAGGCATGCTTTCAGTGCTGAGACTTCTATACTTGAAAAGAAAAAAACAAAAGCAACAACAACAAACTAATTTTACAATAATTTCAAATTAGCAGAAAAATTGCAAGGTCATCTGGAGATATTCCCTGTACCCTTCCACAGGCTTCCCCTAATGTTAACACCTTATATAAACTATGACGCATTTGTCAAAACTCAGAAATTAACATTGG EMBV3_07213 CATCAGCGATTTTGTGGGGGAGGACGAGGAGTTCACGCTCAAGCTTATCAACCGGCCCAT Gene GeneID:337926|FSCN2:NM_176633:33_cdna Constitutive 0 NULL GeneID:337926 19 GENE FSCN2 NULL fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) EMBV3_15773 ACCAGCTCGGCCCCGCAATGTGAGACCAAGGCAGGGAAGAGAGCACCACGCTCTGGGAAT Gene BVT0102_137729 - 1 EMBV3_31638 GK000005.2:119859395-119874458 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18260 AGCAGAGGGAGGCTCTGCTCAAACTCATCGGCGCCTATGTCCATGACCACGCAGCAGCTC Gene BVV0102_453944 - 1 EMBV3_35183 GK000001.2:154103516-154150027 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236439 TCONS_00012073 2 XLOC_144464 XLOC_007623 Coding TCONS_00236439 XLOC_144464 Coding Coding PNLDC1 9:97502863-97529358 j TSS176992 6520 1 TCONS_00236439_1 531 0.223312883435583 19 0.754623688382275 0.00526022548463443 0.00262919349482457 0.00425404505247307 0.00242092469597848 0.00374113091831004 0.00215785315504813 0.00210969939943417 0.00270274167270187 0.00464627643260786 1.51715167391263e-05 8.75842045143344e-06 1.2976657974615e-09 0.000682421779004731 0.000328715213211068 0.000654637615520622 1.24429793570814e-07 6.33524798062346e-16 8.22587997056894e-09 0.00423555088511838 0.00535941820752846 0.0013713419092622 2.4526324936127e-06 8.76000033664616e-10 6.49917325735696e-09 0.00467695644518262 0.00400932681061151 0.00259560871116726 2.52759870742587e-09 1.80280293028534e-10 2.97802319663725e-05 XM_002690375.2 PNLDC1 PREDICTED: Bos taurus poly(A)-specific ribonuclease (PARN)-like domain containing 1 (PNLDC1), transcript variant X1, mRNA. 0.0 3196 100.00 0.271625766871166 NM_001271862.1 PNLDC1 Homo sapiens poly(A)-specific ribonuclease (PARN)-like domain containing 1 (PNLDC1), transcript variant 1, mRNA. 0.0 1893 85.52 0.252914110429448 TCONS_00236439_1 sp|Q8NA58|PNDC1_HUMAN PNDC1_HUMAN Poly(A)-specific ribonuclease PARN-like domain-containing protein 1; 0.0 943 86.35 0.964218455743879 1 coding 0 0 0 0 -1.13196852092808 0.0115975964168086 -0.0611533299858141 0.24682174464777 AGCCCTTTAAGGCGCCGGCGCGGCGCTTGCGTGTAAGTGCGAGGCGACGCGTGGCCGCACTCACTGGGCGCCCTCCGCCGAGCTGCTGCGTGGCCATGGACATAGGCGCCGATGAGTTTGAGCAGAGCCTCCCTCTGCTGCAGGAGCTCGTCCTGGGTGCGGACTTCGTGGGTCTGGACATAGAGTTCACGGGCCTTCGTTCTAACCTGTCTGGGCCCCAGCAGATCAGTCTGTTTGACTTGCCATCAGAGTGGTATCTAAAGACCCGTCAGAGTGTTCAGCAGTTCACCATCTGTCAGATCGGATTGTCTGTGTTCTCCAGTATTGAAGGCGAGTCGAACAAGTATGTAGCTCATTCATGTAACTTCTTCCTCTTCCCTACGACATTTGGGGTTTTGGACTCAGAGTTCTCTTTCCAGGCTTCCAGTGTTCAGTTTTTGAACCAGTATGGCTTCGACTATAACAAGTTTCTCAAAAATGGGATCCCCTATATGAACGAAGAACAGGAGAAGAAAATTAAGCACAACATTCTGACTGGGAACTGGAAAGTTCGCAGCTCTCTGGACAAAGACCAGATCAAGGTGGTGATTGACGAGGTGACGCGCTGGCTGGACCTGGCGGAGGAAGGGGACTGGATGACCCTCCCTGGTATTGCTGGCTTCCAGGCCTTCGAGGTCCAGCTCGTACTGAGGAAGGCCCTCCCTGACATCTGGACGGTGCTGAGAGACCAAGGGGTGATTGTGAAGAAGGTGAGTACGCAGCACCGCTGGTATCTTGAGACCACCTCCTGTGATCGAGAGAGCTGCTGGAAGGAGAAGATTCTTCTCTCTGCAAGGGGCTTTTCTGTGTTTTTCCAGATGCTGGTGAAAGCCCGGAAGCCCTTAGTGGGACATAACATGATGATGGATCTGCTGCATCTCCATGAGAAGTTCTTCAGACCTCTCCCAGAAAGCTACGATGAGTTTAAGCTGAATATCCACAACCTATTTCCTGTTCTCATTGACACCAAGAATGTGACAAAGGATATCTGGAAGGAACTCAATTTCCCAAGGGTTTCAAATCTCTCAGAAGTTTATGAAGTCCTGAACAGTGACTTGAACCCCACCAAGAACTCTGGGCCAGTGATCATTCACGCCAGCAGGTGTGAGAAGTACGTGGAGACCAAGTACCCCCACGAAGCGGCATACGACGCCTTCCTGTGCGGGTCAGTTCTGTTGAAAGTGGCGCACCTGCTCCTGTGGAAGGTACACAGCGCTGTTCCCATCCCCGAGCCCAGCTTCCCGCTCTACCTGGACGTGCTGGCTCCCTACGTGAACCAGGTGAATCTTATCCGAGCCGGGGTCCCCAAAATCAACTTTGCGGGCCCAGACTCCCCTAGCATCCGCCCCCCCATCCTCATCCTCACCGTCAGGAAGTGGCCTGGGGTCAGCGAGCAGCAGGTCTACCGCGAGTTTCAGAACCTCTGCAAATTTGACGTCAGGAGGCTCACGCGGAGCCAGTTCCTGCTCATGACCAATAAGTTCAAGGACACGCGGAGCATCCTGAAGGAGTACAGGTGCCACCCGACACTGCGGATCTCCCTGTACCGCTACTGGAGACACTCCCCGGACATCAACTGCCTGCTGCAAGTCTGCAGCGTCATTACCACCTGGGCCTTCATTGCGTTTCTCCTGGGAGGAGCTGGCCTGTGAGGGCAGCGAGGCCGCCTGCAGCTCCGTCCTGTCTGCACGCGACCCCCGTAGGGCTGTTTGCCTCACATCCTCCGTGCAAGTGGATCGGTACTGTCCCCACAGGGAACTGTGTTCTGGTTTCAACGTGAAAAAGTCTGTAAATATTATCACCGATAAGTCCTTTGTTTGTGGCCCAAACGTTTCTTTCTATAAATGACTGAGGAGAAGTAACGTCTCCTGGGCGTTTAAGCTCACGTTCCAGAGCATCTTCTGAACGGACAGCTAGGCATCCAGCGGAGCTGGCCACTGAGCGAGCCAAAGGCTCTGTTATTTCTGGCAGAGAAATCATTAGCCAATCGGTTGACAGGGATTTAGGCCTTAGAAATGGCCTACGTTTTAGTAAAGGGGAAAAGTAAAGCCAAGTGTCCATGTGCACAGGTGTTGATCTGTTTTTATTTATTTTGGGGTTTCTCTTTGGGGTTTTTTGGTTTGTTTGTTTTCTGGGTCAAAAATAGTTTTTACTGAGGAGAAAAGACTCCAGCCTACAAATGTGCTACTTGTAGTTAAAATTTTATATGTTTAAGTTGTAGAATATAGTATTTCATAGGTTAGAACAGAGAACAGTTAATATCAGAATCATGGAAAATGCCATGCAGAACAAGTAAATAGGACATCGTATTGTTAGGTTTGTGTAGCTCAACTCTAGTGAGTGTAAAGGTAGGTTGATTTTCCTTATTCATCTGTTCACTGATTCAGCAAATATTTACTGAACTTCTATGATGCCTAAGATGTTAGAACGTGTCTTTTGGATGTTTATGGTAATAGTCATTTAGTTTTTGTTTTTTAATTAGGTTGCCATTTATAAAATCATACACGGCCCCTGATGTTTTGCTAAGAAGCTTCCCCTCGGATAAATAGGGGTAGAGCAGACTATGGTTTTATGGTCCATGTTTGAGATAAACATTATAAACCATAAAGCATTAATACTCACTTTGGAAACAAAGTGACCTGTAGCACAGGTGTGTGCCCCGAAACAGGTAGGATCAGATTCTTTTCTTTCCTCAGCAGTGACGTGCACGTCACTTGGCCTTATCGGGAGCTGTTCTCTGTTGGGGGTTGAACTTGGCTGGGCTGTGTGCTCAGCCTTGAACTTGACTTCATTATTCAGCAAAGCCTTGAGCTCTGTGCAAAAGAGGTTTTTTCCTCTGTAAAAGCAGAAGTGTTAAGAGATGGCAGTCACCCAGAAGAAGAGTTTGGAAGCTGCCATTCTGGAACTCCCCTGTCGTCCTGGGGTGTGAGTGACACGCTGACTGATGGGCTGCTGTCCCTACAGCCTTCCGGGCAGCTCTTGTGTTCAGACCAGTGAAAGGCTTCCCTTGGTCGGGGGAAGGGGGCTTTGTCCATCTGTCCACACAGCGTCTTAGGGGAATTTTTTTCTTTTTTTAATTTATTTGGCCGCACCAGGTCTTAACTGTGGCATGCAGGGAGTCTTAGTTGGCAGCATGTGGGATATCGTTCTCTGACCAGGGATCGAACCCAGGCACCCTGCATTGATAGCACTGAGTCTTAGCCACTGGACCACCATGGAACTCCTGGGGGATTTTGTTTTGTTTTTGTCTTCCTATTGGGTATTCCTTTGTGTATGCTGTGGAAAATTCCCACTGTTTATGGGCTTTTGGGACCCTGTCTCATGGATGTGAGCCATGCAGTCAGTAGGCAAACCTGGGAAGTGAAAACAGATTTCTCAGCTGAGCCTGTGCAGTGGCCATGTTGACCTCCTGGTGTCAGGGCGCTGAGCGCTAAGCTGTCTTAGTTCTGGAGCAAGAGACCCTGTAGTTGTTTTATCAGATGTTACCCATTTGCTCTTTAACTCTTTGTCTCTTCATAAGTTGTTGCGGAGTCCGTGCTAAGGGTGCCCTCACCAGGGCCTCTGTGCTGCAGTCAGCGTCCTGCTGTCCATCCGTCCGTGGGGACCCCGGCTGGCTGCATGGTCTGCTTTCCCTCCTGGAGGAGGCTTTGGTGGTGGGATCTGAGCTGCTCAACCCATGACCTCGATCTGCTTCTGTTTATTAACTTCCCTGAGGATTCTCCACGGGTGCCGCGCTGGAGGTGCCGAGTCCAGGAAGCGCCGTGCTTGTACCACCTCCCACCCTGTGTCCCCAGACAGAGCCTCGGGGGCTTGGGGGGCAGCTCTGGGGCTCCTGCCCCCGCTCTCTCCTCAGCTCAGCTAGTTCTTCACGTCGGTGCATCTTGTGCCGTGCCTTCCCCGTCATCAAAGGAAAGAACCAAAGTGAGAAACAGATAAAGCAGACTCTCCCCTCCAGTCTGTGTGTACATGAGTGTGTGTGTCTCACGTCTTCCATTGTTTCCCTGTCTTGGCTGCGGTGAATAATGCTGCAGGAAACGGTGGGTGTGCATATCTCTCTTTGATAGTTTGTTTTCATTTCCTTTGGATATATACCCAGAGGTGGGACTGCTGGATCATATGGTAGTTTCATTTTTAATTTTTTGAGAAACCTCGATGTCGTCCTCCATAGTGACTGAACCAGTTTACAGTCCCACCAGTCGTGCACATGGGTTGCCTTTTCCCCACAGCTTTGCCAGTACTCAACTTGCAACCTGTCGTCGTCTTGATAATAGCCATTCTTACAGATGTGAGTTTATCTCATTGTCTCATTGTGGGTTTGTTTGTTTGATTTTTTTTTTTTTTGGCTGTGCCACTGGCTTGTAGGGTCTTAGTTCACTGATCAGGGATTGAACCCAGGCCCTGGCGGTGAAAGCGCCAAGTCCTGAATCCCAACCCCTGGACTGACAAGGGGATTCTCTCATTGTGGGTGGTTTTGATTTGCATTTCTCTGACATGGCTCAGTGGTGAAGAACCCACCTGCCATGCAGAAGGTGTAGGTTCACCCCTGGGTTAGGAAAATCCTCTGGAGAAGGAAATAGCAACCCACTCCCAGTATTCTTGCCTAGGAAATCCTGTGGCCAGAAGACAGAGGTGGGCCACAGTCCACGGGGTCGCAGAGGAGTCCGTCACAACTTGGCGCCTCAGCAACAACAAACAGCAACAATTAGTGACGCTGAGCACCTCTCATGTACCTGTTGGTCATTTGAACGTCTTCATTGGAAAAATGTCTATTTGGTTTCTCTGCCTGTTTTAAAATTGGACTGTTTGTTTTTTTCTTCATTGAATTATGTCAGTTCTTTATATACTTTGGGGTGTTAACCCCTTATCTGATACAGATTTCCCCCACTCTCTGAAAGCAGAGCTTTCCTGTGAAACCTTCTGAAAGCCCCAGTGGAGCAAAGTGAAGAAGCAGTTACCTGAGGACACATGTTGCTTGTAAAATGTCCAGATGGATGGGGATAAAGCACAGATGCTCAGAGACAGTGAGGACCATAGAGTGGGGTGCCAAGGTGCTAGAGTGTAGCTCCTGGGGAAGGAGCCTGGTAACGCCAGTCTTGCTCTTGAGGTGACGCTGCCCCTAGGACGTCTTGCTGCAAAACAAATACTGAACACTGTCTCTGCTTTTTATCTTTTTCCATAAAAATGAAAAACTTGATTCCTTTCAGCTAGGAATATCAGGTACTAATGTAGGCCTTTTGAAAAAGCAAAGTGGCTTAAAACCAAAAGTGGGGGAGATCTCTCCATGGTTGTGCAGCTCTTTCTCCCATTCTGCAGGCTGCCTTTTTGTTGTGTTGATTGTCCATTTTGCAGCGCAGAAACGTTTAAATGTGATGTAGTCCCACGTGTTAATTTTTTTTTTTCCTCTTTGTGCTTTTGGTGTCATATCCTAAAATCATTGCCAAGAGCAATGTTGAGAGGCTTCCTCCTTATATTTTTCTCCTAGGAATTTGATAGTTTCAGGTCTTAGGTTTAAGTCTGAGCCCCTTCGAGTTACTTTTTGTGTGTGGTGTAAGATAAGGGGTTCATTTCATTTTTCTACTGTATTCAGTTTTCCTAACACCTTTTGTTGAGACAACCCCTTCCTCATTATATGTTCTTGGCTCCCTTAAGAAATATTAGTTGACCATATTATAAGATCTTAATTTTATCTTTATCATTCATTATAAGAACTCATGCAAGTCCTCTAGAATGTTTTATGTAATTAAGAAGGGTAAGGAACTTTCCTGGCAGTACAGTGGTTGAAACTGTGCATCTGCTGCAGGGGGCCCAGGTTCGATCCCTGATCAGAGCACTAAGATCCCGCATGGCCCCAAAAAAGGGGGAAAAAAACAAAGTAGTGAATATTTATGGATGGACATTTCTTACAATTTCGTGTCTATAGGACTTCACTGGGTACCCCCCCTTCTCCTTGCAACAATGTAACTGCTGTGGAAACAGGACGATATTAATATTCTTACAGATCAGAGCAGACAGGGGTCCCATGAGAACTGGGGATGAGAAGGCAGGGGACTAATGTACAACCAGAACTGTGGGCTTATTTGGCCACGTAGAGTCTTATTTACCTGAAGACCTGAAAACTCCACTTTCCACTCGTGGAAGAAATGAGCTAGTCTTACCTTTAAGATCGCCACATGCTAGTTTTGATCCAGATACTCTGCTTTTGTGTCTTCCAATAAATACAATGTGTGAAATTTCTAATCTGTTTTGTGCAGTATTTTGTTTAAGTCCTCTAGCATCCACATTTGCCTTGAAGATCATTCTGAACTTTTTGGTTGTTGCTGGTGTCAGCGCTCTGATCTCTACTTGACCTTTGGAACAAGTTCAAGGGCAGAGACCCACAAAGCTGAAGGAGTGGTGTGGGTGATGGCTAAATATTGTGACGTTATCTTGGGCAGAAAACAAAGGAATGTCATTAAAATCCCTTTGAGTGCTGCCTCGTAGA EMBV3_43140 ATGAGGGCATTGGCAAGAGATGGTGGAGCTAGTAGATGTTTTAGTTCCTGCCAGTAAATG Gene GeneID:616544|RG9MTD2:NM_001035477:17_cdna UTR3_Alt 2 NULL GeneID:616544 6 GENE RG9MTD2 MGC128771 RNA (guanine-9-) methyltransferase domain containing 2 EMBV3_36719 TGCAGGTACATATGAAGAAGCACACGGGGGAGCGGCCATACAAGTGTGACTACTGCGTCA Gene GeneID:535214|ZNF236:XM_002697651:52_cdna UTR3_Alt 2 NULL GeneID:535214 24 GENE ZNF236 NULL zinc finger protein 236 EMBV3_05614 AGGGGTCCCTGTGCTTATAGTTGCTAACAAACAAGACCTGAGGAACTCATTGTCTCTCTC Gene GeneID:767906|ARL4A:NM_001076985:53_cdna Constitutive 1 NULL GeneID:767906 4 GENE ARL4A MGC127610 ADP-ribosylation factor-like 4A EMBV3_18288 GAAAAAATAAAACTGCAAGCACTACTCCAAGTTCTCCAGAGGCAGCCCGTCACTAAGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32930 ACACGTTTACTGTAAGTCCTTGCATCTGTGGTGCTAGGTGAGTGTGAGAAGGTGTCAAGG Gene BVT0101_023958 + 0 NULL GK000013.2:47915710-48086222 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045344 TCONS_00045346 TCONS_00045348 TCONS_00045342 TCONS_00045345 TCONS_00045343 TCONS_00045347 1 XLOC_026417 Coding TCONS_00045348 XLOC_026417 Coding Coding GPCPD1 13:48083091-48150199 = TSS33113 5664 1 TCONS_00045348_3 672 0.0406073446327684 20 0.915895510155423 0.000421778525518767 0.000425554450265655 8.18472901073514e-05 0.00024098849100338 0.000371525090410493 0.000215188421907811 0.000103800618126596 9.65534870912566e-05 0.000517163751665229 0.00140608831915244 0.00084998476027169 0.00081213606084631 0.000123805529298293 0.000487406289155449 4.53652090457716e-07 0.0194884398823315 0.0150375189341088 0.025371061198482 0.00077449923393041 0.000472138583883686 0.000161604035179172 0.0109203239215135 0.0112120422127733 0.0129198696989615 0.000717533071231117 0.000335632250449371 0.000344848259073675 0.00305220391373885 0.00269990321857312 0.00544706192864543 XM_002692364.3 GPCPD1 PREDICTED: Bos taurus glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) (GPCPD1), transcript variant X1, mRNA. 0.0 1.022e+04 100.00 0.999823446327684 NM_019593.3 GPCPD1 Homo sapiens glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) (GPCPD1), mRNA. 0.0 4855 85.56 0.734286723163842 TCONS_00045348_3 sp|Q9NPB8|GPCP1_HUMAN GPCP1_HUMAN Glycerophosphocholine phosphodiesterase GPCPD1; 0.0 1366 97.62 0.998511904761905 2 noncoding 1 1 1 1 0.490993809737372 0.297745626599408 -0.018033645751087 0.754195866249426 GTTTGGTCTGGAGCAGCTGAAACCGGTTTGAGCGGAGCCGCTTCCTGTTGCTTGGTGCCGCTGCGGGCTGCCTGAGGGAGCGCTGGCGAGGTGCTGACGGCCGGCGCCCGGCACCTCGGCCTGCGACTCTGACTGTCGGGCGCGGAGTCGGTGGTGGCGCTGACCCGGGGACCCAGCAGCACGACATCCTAAAATAAATCCATCAGAATGACACCTTCTCAGGTTACCTTTGAAATAAGAGGAACTCTTTTACCAGGAGAGGTTTTTGCAATATGTGGAAGCTGTGATGCTTTGGGAAACTGGAATCCTCAAAAAGCTGTGGCTCTTCTTCCAGAGAATGAAACAGGTGAAAGCATGTTATGGAAAGCAACCATTGTACTAAGTAGAGGAGTATCAGTTCAGTACCGCTATTTCAAAGGGTGCTTTTTAGAACCAAAGACTATCGGTGGCCCATGTCAAGTCATAGTTCACAAGTGGGAGACTCATCTACAACCACGATCAATAACCCCTTTAGAAAGTGAAATTATTATTGACGATGGACAATTTGGAATCCACAATGGTATTGAGACTCTGGATTCTGGATGGCTGACATGTCAGACCGAAATCAGATTACGTTTGCATTATTCCGAAAAACCTCCTGTCTCAATAACCAAGAAAAAATTTAAAAAATCTAGATTTAGGGTAAAGCTGACATTAGAGGGTCTGGAGGAAGATGATGATGATAGAGTATCTCCCACTGTTCTTCACAAAATGTCAAATAGCCTGGAGATATCCTTAATAAGCGACAATGAATTCAAGTGTAGACATTCACAGCCGGAGTGTGGGTATGGCTTACAGCCTGACCGTTGGACAGAGTATAGTATACAGACAATGGAACCAGATAACCTAGAACTAATATTTGATTTTTTTGAGGAAGATCTCAGTGAACATGTAGTTCAGGGTGATGCTTTTCCTGGACATGTGGGTACAGCATGTCTCTTATCGTCCACCATTGCAGAGAGTGGGAAGAGCGCTGGAATCCTTACTCTTCCCATCATGAGCAGAAATTCTAGGAAAACAATAGGCAAAGTGAGAGTTGACTATATAATTATTAAGCCGTTACCAGGATACAGTTGTGACATGAAATCTTCATTTTCCAAGTATTGGAAACCAAGAATACCATTGGATGTTGGACATCGAGGTGCAGGGAATTCTACAACAACTGCTCAGCTTGCTAAAGTTCAAGAAAATACTATTGCTTCTTTAAGAAATGCTGCTAGTCATGGTGCAGCCTTTGTAGAATTTGATGTACATCTTTCAAAAGATTTTGTGCCTGTGGTGTATCATGATCTGACTTGTTGTTTGACTATGAAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTGAAAGAATTAACATTTGACCAACTCCAGTTATTAAAGCTCACTCATGTGACTGCACTGAAATCTAAAGATCTGAAAGAATCTATGGTTGAAGAAGAAAATTCCTTTTCTGAAAATCAGCCATTTCCTTCTCTTAAGATGGTTTTAGAATCTTTGCCAGAAGATGTCGGGTTTAACATAGAAATTAAATGGATCTGCCAACAAAGGGATGGAATGTGGGATGGTAACTTATCAACATATTTTGACATGAATCTGTTTTTGGATATAATTTTAAAAACTGTTTTAGAAAATTCTGGGAAGAGGAGAATAGTATTTTCTTCATTTGATGCAGATATTTGCACAATGGTTCGGCAAAAGCAGAACAAATATCCCATATTATTTTTGACTCAGGGGAAATCTGATATTTACCCTGAACTCATGGACCTCAGATCTCGGACAACCCCCATTGCAATGAGCTTTGCACAATTTGAAAATCTACTGGGGATAAATGCACATACTGAAGATCTACTCAGAAATCCGTCCTATATTCAAGAAGCAAAAGCTAAGGGACTGGTCATATTCTGCTGGGGTGATGATACCAACGATCCTGAAAACAGAAAGAAATTAAAGGAATTTGGAGTTAATGGTCTAATTTATGATAGGATATATGATTGGATGCCTGAACAGCCAAATATATTCCAAGTGGAGCAGTTGGAACGCCTGAAGCAAGAATTACCAGAGCTTAAGAGCTGTTTGTGTCCCACTGTTAGCCGCTTTGTTCCCTCATCTTTGTGTGGGGAGCCTGACATTCATGTGGATGCCAATGGCATTGATAACGTGGAGAGTGCTTAGCGTTTACTGGGTGGAGACCATTTGGGGCATGCACCGCTATTCTGGGTATTCACTTTTCATCACTAAGCACTGTTTATCTATGCCTTTTAGGTTTTCATTCCAATGAAGCAATAATGAAGTATTTTCTATTTCATTACAGTTCTTGCTAGAATTTCAAGTATGCTATTTAAATCACTTGGCCAGGTATAATTACCAGTCAATCTCTTTACATGAGAATATTTATTGGTTGGTAAATATTTTAAACTAAATGTGTAAATGTATAATGTTAAACATAGAATTTCGGAATTAACTATATAAATATCTCATATTTACACTTAGTACAGCTTTTTATTTGATCAGGTCGGAAATACTTACCACTCAGAAGAACATGGCTATGCATAATTATACCTGACCATGGGAAAAATAAGTACCTCAAATGCATGTATTTGCACTGGTGATTCCAACTGCACAAACCTTTGTGCCATCTGTGTGTATATGTAGTTTTCACATGAATTGACATGCACACCATTTTCATTCAGTATGAACCTTGAGGCTGCTGCCATTTTCCCATTTAACCAAACCGATACCTGTGTAAATAGCCTAAAGGTGATCCTTGAAAACTTGTTTCATATATATTTCAGAAGTTATTTTGCATAAATATTAAAATTCCAAAAAGCTGCAGGGTAACTTAATGTATAAAATATTACAAGTATGGATTGCAGACTTCATACAATAGATGATAGTGTATAAATTCTATTGAATGCATGCTTTCTGTTTTAAGCATGAGACTGTACACGTTTACTGTAAGTCCTTGCATCTGTGGTGCTAGGTGAGTGTGAGAAGGTGTCAAGGACTGAAAAAATATTTTGTTGCCTAACAAAAAAAAAAAAGGAAAAAAAAGTTGTCTGTAGGCATGTTAAATATGCTTAAGTGTGTCTCTCTCTACCTATTACACACCATTGCTTTGTGGATTTGTTTTATGTATGTGCATGTTTACAGTAGATAAAACCCTGTGCAAAAAATAAATGTCCTGAATTCTCATTGGTATTCTTTATTGGTTAATGAATGTCATGCATGTAATTTATTTAGAAATGTAGAAGATGCTACTATATGTGTATGTGTATTATTAGGATTATACAAAGGTTTCTTTTATTAGAAGCAGATTGTTTTGGCATAACTAACTTACCAGTGAATGTTAAATAAAATACACATATTTATTATCTTCATTATAAAATGAAATTTCAAGATGTTACTTTTGTAAAATTGGTCCCTTATTATTATTATGAGATATTGGAATTTAGTGTCCACCCTGAAAGGATGGCTTATTTGTATACAGCTTTTACTTCATGTAGGCAGTTTATTCATTACTGATATGATTTGGTAGTAGCTGAGAACCTAAAAGTTCAGTTGTATGTTGTATCTTTACTTTTTCAAGCTGAGTAATGCAGTTTTGGCCAGATCTTAATTGTGTTGAAGATAGGCTTTAAAATCCTCTGGTACTCTGTTTGTAACACTAATATTTAATGGAAAATAGTTTAGGAAATGGAGTTTTCTGCAGGGATTTTATATACTTTTCTCATGTTGAAAGGATTTTGCAACACTGTGTGTGGAAATTAACTTGGTATGAACTAGGGACTTTTAGAAAACTTCTGAAAAAGAATTACTTTTTTTGATCTACAGACCTGGTATAACACAGTTACCATTACTTTATGATAACTCTATTAGCCATATGTGTGTTTCTAGTCCTGTTTGTTTGCTCCTCCCCTGTGCCTTTTTAGTTCCAGCTCCATTTTGAAGACTTGCAGATCATGAATGGAAAGAAGAGGAACAGGAAAGGAAGTGATGTAGGGGTCAGTTTCCTCAACAGTATAATTTGCTGAGTAGAGCTTACAGCCACTGCTTATGACAAGGACAGAACCTCACTGCTCACTTTCTCCTGTCTCTTGCTGACCTTACAAACACCAGGGTTGCTGCTGCTGCTGCTAAGTCCCTTCAGTCGTGTCCGACTCTGTGTGACCTCATAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGTTCTCCAGGCAAGAACACTGGAATGGGTTGCCATTTCCTCTCCAGTGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATGGGATTTTCTGATTAACTCATAGCTAGCAGTAGCTTCCCTTTTTATAGAACTTCCATATCACTAGCTGTTGCCCCATACACTCTGCACTAGCTATACTGTGCCTGTATTAGGCCCTCGCCATGTCGTATTCCCACATTGCTCCCTGTCTGTAGCCATGTGCCTTGCCTGGAAGCCTTTTCTGCCCCTGATACTTTCTCCTTGCTCACACTCATTTCTCCTTTAGCCCTTCATCAACCTCTCTGCTGCATCCTTGCCAAAACTTAGAAAGGGATGAATCCACCTTTTTTTAACTCCATGGCCAAATGTTCATTCCTTGATCATGTCATGCAAAATGGTACATTCTTGGTAGACACAGTTAATGTTCATCTCACCACGTTGCAGGCTCTTCAAGGGTAGGGACATTGTTTTACAAATTTTTATTTCCATAGTGCATGGGGACATAGTAGAAAAGAAGCGTTGGAATTTTGAGGATAATATAATCTGTATGAAATGTACTTTTGAGTTAGATTTAATTTACTAAGATGTAAACTTTGAGTTGGTTTACATTTTGCAGTGAGTTGGTTTACATTTTGGCAGTTGGAATAGTTTATTAATGTCAACTTTAAATGTAGAAGTATAATGTTAAATTATTTTATATTTTTTGGAAATCGAGTGAAATGTTTGATAAAATGCTGCCATTATTCCCTGATTTTTTTTCCATTTGTACTGTAACTGAATGTAAGTATGAGGAACACAGTTCATTCCTGTGTCAGTGGTGCCTGAGGGCTGCCACCGCCACCTGTTTACCTCACTCCCATTGCTCCTTGTGACATTTGTCTTTCTTCTCCCCTCCGAAGCCCATACTTAAGCCTACCTCAGCACCGCTTTCCTTGACTTCCTTCTGCGTTCAGCTCAGGTGCCACCAGCTCAAAAACCATTCCTCTGCTTTTGATCAGAATCATGATGCAAACAAGTACATACAGCCTCTAAATCTCACAATTTTGCAGCTGGGGTAGTAAACCCAGACAAGTTAACTGACTTACTGGGTTGGGACTACAACTGGGCTTTGTGACTCCCAGCCCTGTGTTCTTGGACTATCCTGCCCTCTGAATTTTTGTGGCATTTGTTAGCATATGCTTTCTTGTACCCACTTTTTATGTGCCTGTTCTATTTCCCTTATAAGATTGTAAGCCCCTTAAGGGCAAGGGCTTCTTTGCGTTTCTAGCACTACCATAGTGTTCTATATTTAGATATGAACTAGATGAATAAATGGTGGAGACTACAA EMBV3_04216 AATAAGCAAAATAACGTCCAAATTCGTCCGCAGGGATCCAAGTGAAGGCGAAGCCAGTGG Gene GeneID:539563|MARK1:XM_002693962:157_cdna UTR3_Alt 2 NULL GeneID:539563 16 GENE MARK1 NULL MAP/microtubule affinity-regulating kinase 1 EMBV3_02185 TGTGTCTTAACAGAGGTGTGTGGTGGACACTCTTCGGCTGGAGTTAAATGTTTTTCTTCC Gene GeneID:616045|DOCK9:XM_002691970:29_cdna Constitutive 2 NULL GeneID:616045 12 GENE DOCK9 NULL dedicator of cytokinesis 9 EMBV3_41907 GGCAAGTATGCCGTGTTAAAGGCTACCAAGTCGCTCATCACATACCGCACCTGCAAATGA Gene GeneID:531650|LOC531650:XM_002699864:68_cdna Constitutive 0 NULL GeneID:531650 X GENE LOC531650 NULL similar to Histone H2B type F-M (H2B.s) (H2B/s) EMBV3_00567 GCTGAAAGCTGTACACACGCAGGTTCAGAGTCTTAATGAAGCCCGAGCATGAGGAATACG Gene BVV0102_075718 - 0 NULL GK000006.2:103233328-103374249 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00037 ACCCCAGGGCACCCCGAGCTCTCCTTCCTGTGAGCACGTAAGCAAGGAGTGTGGAATAAA Gene GeneID:789168|ZACN:XM_002696171:139_cdna Constitutive 2 NULL GeneID:789168 19 GENE ZACN LGICZ1 zinc activated ligand-gated ion channel EMBV3_03388 ACTGAGAGTGGGAACTCACTATGAATATAGATCACTGGCAGCGGCCGATTGGCCGTACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30317 GAATAGACTTTTGGACTCTGTGGGAGAAGGCAAGGGTGGGATAATTTGAGAGAATCGTGC Gene BVV0102_390905 + 0 NULL GK000024.2:50381416-50410391 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07854 CTACCCCCATTTGTCAGCAGCCCCCTCCCTCAGTTCGATGTGGTGCTATCTTCGTAATAT Gene GeneID:618340|NARF:NM_001102318:147_cdna Constitutive 0 NULL GeneID:618340 19 GENE NARF MGC142866 nuclear prelamin A recognition factor EMBV3_14696 CGGCGAGGATCGCGCGAGGCAAGATCACTGACAGCCACCCTCCCGCCGGCCTGGGACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14750 TGTCCCGGGGGCAGCTTCCTTCTCTGCAGAAGCCGGGACAATGGGATTAGCTGCGCGGTG Gene GeneID:100295627|LOC100295627:XM_002697586:27_cdna Constitutive 0 NULL GeneID:100295627 23 GENE LOC100295627 NULL hypothetical protein LOC100295627 EMBV3_17881 GCAGGAGACTTTTGCCTTCTCAGAAACTGGCTATTCCATCTGTACCTTCAGGGAGTTGCC Gene GeneID:782020|PTER:NM_001101282:166_cdna Constitutive 0 NULL GeneID:782020 13 GENE PTER NULL phosphotriesterase related EMBV3_19757 ACAGTGCCTGGGATGGACGTGGTACTTCTCAGTCTGCCTGTTCTGAGAGAAGAGCAATTA Gene BVT0102_091135 + 0 NULL GK000014.2:78484613-78500602 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053953 TCONS_00053956 TCONS_00053951 TCONS_00053955 TCONS_00053954 TCONS_00053957 TCONS_00053952 1 XLOC_031867 Coding TCONS_00053955 XLOC_031867 Coding Coding CPNE3 14:78498681-78547035 = TSS39696 4906 1 TCONS_00053955_1 533 16 0.898868736169421 4.06163064867116e-11 8.90928476993225e-22 5.28657695901435e-06 1.26607562812019e-10 1.21829894858412e-18 6.35278391392473e-27 5.16722622335826e-33 3.76099834818566e-11 8.85892837581051e-24 6.37912237913293e-15 0.000112879988558616 1.66764841754386e-11 7.1518711376478e-15 3.70222115285261e-14 2.16359295834417e-16 0.0174105839881395 0.00979153407469794 0.0215795471450619 1.56304680686021e-18 7.31818943583867e-05 1.35998338329965e-13 0.00247000270386615 0.00291612516065439 0.0103807688625519 2.18317023097259e-15 9.0078626595725e-17 2.3153234588969e-19 3.96840861296889e-09 0.000305792627218706 3.18627771581185e-05 XM_005215676.1 CPNE3 PREDICTED: Bos taurus copine III (CPNE3), transcript variant X1, 0.0 8529 99.96 0.965144720750102 NM_003909.3 CPNE3 Homo sapiens copine III (CPNE3), mRNA. 0.0 3535 77.15 0.952710966163881 TCONS_00053955_1 sp|O75131|CPNE3_HUMAN CPNE3_HUMAN Copine-3; 0.0 1030 95.31 0.99812382739212 3 coding 0 0 0 0 0.0211878587739668 0.834914905899497 0.0462590015580883 0.388334893133211 GTTTCCTTGGACTCACGGCGACTGGGAGACTGTGCGGTGTCCGCCTGCCGGGTCCTTACGGAGGGACTCCCATCCCTGTGGCCGAGCCGTGAGTGCGGACTCTCCTCTGCTTCGGGCCCGGTGTGGCGGGGCACCCGGAACCCAGCGGTCCCCTGGAGAGGAGAAGGAGCCAGCTCAAGAGATGGCTGCCCAGTGCGTCACAAAGGTGGAGCTGAATATTTCCTGTGACAATCTTCTGGATAAAGACATAGGGTCAAAGTCAGACCCTCTATGTGTGTTATTTTTGAATACGAGTGGTCAACAGTGGTATGAGGTTGAGCGCACAGAAAGGATTAAGAATTGCTTGAACCCCAAATTCTCCAAGACATTTATTATTGATTACTACTTTGAAGTGGTTCAGAAATTGAAATTTGGGATTTATGACATCGACAACAAAACTGTCGAGCTGAGCGATGATGACTTCTTGGGAGAATGTGAATGCACCCTTGGACAAATTGTTTCCAGTAAGAAGCTAACGCGACCACTGGTGCTTAAAAATGGCAGACCTGCAGGAAAAGGGAGCATTACGATTTCAGCTGAAGAAATAAAGGATAACAGAATTGTCTTGTTTGAAATGGAAGCAAGAAAACTGGATAATAAGGATCTATTTGGGAAGTCAGATCCTTACCTAGAGTTCCACAAGCAGACATCTGATGGAAACTGGCTAATGGTTCATCGAACGGAGGTTGTTAAAAACAACTTGAATCCTGTTTGGAGGCCTTTTAAGATCTCTCTTAACTCTCTGTGCTATGGAGATATGGATAAAACTATTAAGGTAGAGTGTTATGATTATGACAATGATGGGTCGCATGATCTCATTGGAACCTTTCAAACCACAATGACAAAACTGAAAGAAGCCTCCAGAAGCTCACCTGTTGAATTTGAATGCATAAATGAAAAAAAGAGGCAAAAGAAGAAAAGCTACAAGAATTCAGGGGTGATCAGTGTGAAACATTGTGAGATTACAGTGGAATGTACATTCCTTGACTATATCATGGGAGGCTGCCAGCTGAATTTTACTGTGGGAGTGGACTTCACTGGCTCCAATGGTGATCCGCGTTCTCCCAACTCCCTTCACTACATCAGCCCCAATGGTGTTAATGAGTATTTGACTGCAATCTGGTCTGTGGGACTGGTCATTCAGGACTACGATGCTGATAAGATGTTTCCAGCTTTCGGCTTTGGAGCGCAGGTCCCACCTCAGTGGCAGGTTTCTCATGAATTTCCAATAAACTTTAATCCATCCAATCCCTACTGTAATGGAGTCCAAGGCATTGTAGAGGCATATCGGGCCTGCCTTCCTCAGATAAAACTCTATGGACCGACCAACTTTTCTCCAATCATAAACCACGTGGCCAGGTTTGCCGCTGCAGCCACACAGCAACGGACAGCCTCTCAATACTTTGTGCTCTTGATCATTACTGATGGCGTGATCACAGACCTCGATGAGACCAGACAGGCGATTGTTAATGCTGCCAAGCTGCCTATGTCCATCATCATCGTCGGCGTTGGAGGCGCGGACTTTGGCGCCATGGAGTTCCTAGATGGCGACGGCGGAAGCCTCCGCTCCCCGACCGGCGAAGAAGCCGTCAGGGATATTGTCCAGTTTGTGCCTTTCAGGCAGTTCCAGAACGCTCCAAAAGAAGCACTTGCTCAGAGCGTCTTGGCGGAGGTCCCCCAGCAGGTGGTGGGCTACTTCAACACATACAAACTCCTTCCTCCCAAGAACCCGGCTACGAAATGAGAGGCGCCCTGGTCGTCCGAGCAGAATTCTGTTGTGCTGTGTGGAGCAACAGATTTCTCACCATCTCAAATCGCGAATCTGTCATTTTACACCCTTCTCAGAAACCCTACGATTTACAATGCAAACCTAGCTCTCTCTGGAGTATGTCTATTTAAAGCATTCTTTTTATACTGTTTTTGGAGGAGAGCGCTAACTTAGGCTTTGCCCAGTCAACCCAGTGATTGCCAGTCATTGCAGTAATTGCGGTGAGGCTGTTTGGATTAGGAGCCGGTGCGAGAAAAGCACACGTTCTTGTGGTTGTTTACTTTCATGTGATGAAAATGCTGTTTTTGAATGTTTGTCAATAGAAAGAATGGGAAATTGTTGGAATGATGCAATTTACAGGTTGCTGTGCTTTGCTTAGGCGATATATGTATTATAAGCCGATGTCCACACCAGATGACCAGAGTTTCTTAAATTAGATGATACTGAATTTGTATCTAGAACTATATTTTATGCTTTTCCGTGGGATAAAACTACCTTCACTTGTGCTTGAGTTTTGCTGCAACTTAGACATGCACAGTTCAAAACAGAATGCATCCTCAGAAGACTTCATAAGAAGTCCCAAATTAGAAAGGAAGACACATACATATTCAGTTCTTAAAGCTGTAAAATCAACAAGTAGAAGGAACTTCCTGTAAGCCATTTTATTTGCCTTCCTGGATCTTTCATTTTCACTATTTAATATTGTAAATGTGGTCAGATTTGACCTTTTCATTGATTGTATGTGACACTCGGGATTCTGTATGTGCATTAATGATAGCTTGTCCTAGACTCAGCATTATTAGATGATTTCAACTGGAGTTTGTTAAAATGGGTAGGACTGGGTTTGTCCAGGAAAAGCTATAAGGACCAAACATATAAGGGGAAATTCGGAATTGCACTTTCTGTTAGTTAATGAAAGACATTACTTATTAAAAAAGGCAAGCTTTATATTTTCCTTTATATCTTCCAAGGTCACATACATTGATTTCTACATTTATATAGATTCATTTAGGTATTTTCTCCTTTTTTTGTTAAAGTGATTTTTTACTCTGATTTTTTAAAACTCATGATAATGGTTATTAATCAAAATCCTATTTTACATTTTAATACCATGCTGCTTCCTAAGCCCAAAATGTATGGTATTAAGCAAAAACCTACTATAACTTAAAAAAAAAAAATCCAACTGCTGCATAGGATAGAATGGACTTTCCATGCTTTTTTTTTTTTTTTTAGTATATTTTTTTTTCCTGATGTTTACACTTTGGAATATAATCCTTAGCAAACATTACCTTTTCAGAATGGATTAAGGTTTTACTGAGGACCTGTGTGCCAAGTACTACACATGTCCGTGTGCTGGCCGGTCATGAAGTAACATCTGGTTATTGAGGACTGCATGTCGGTCACAGATCCGTATGGGATGCACCTTGTGCTGTGCTGACGTGCCTTCCAGGGTTACTGAAAATGTGCCACCGCGCGGGTCTTTTGTCCCCTGAAATATTTGAAGGAAGCGAGCCCTCAGCCATGAACAGCTTTTGGCTTCTCGGAAGCCGCTCATTGTCCAGGTCAGGCTGAGAGGGGCTCTGCTGACCATCGTGGGTGCCTGCCCCCGGCGAGCAGAGAGGGCGTCTGCTGACCATCGTGGGTGCCCGCCCCCGGCGAGCGATTAACACTTTCCACTCAGCTAGCTGGCCTCTGGATGTGCGTTGTTAACCTGAAGGTACTTATTAACTAGTCGTCTATTACCCTATAGTATGACTTATGAGATGACAAGTCATCTTGACGTCCGTCAGGAGAGGAATGAACTGCTGACTCTCCCAGGAGTTTGCAGCCTCTGTGTCTAAGATGCCCTGCTTTCAGTTCTTTTTGGTGCTGGGGAACAGCATATATAGTTTGCTTTGGTTTTCAGAATTTTCTTTTGTAAACATACGCGGCCTTTAAAAGAAACGATTTGCATGTGATCTTGGTACACTGCAAGACAGAAGTAGAGGTTCTAGTGTGAAGCTGAGGTCCAGGGGTCACCGGGCCCCCTCCTCAGTCTCCTGAGCCCCATCCTGGCGGCACTGGGGCCGCCTGCAGGGCACCTGGGCACCGCTGGTCAGAAGCATTCATTGCTTTCATCGGCCAAACCAGTGTCCTGTCACCACTGTCATTGATTTGGTCTTCATAATTTTATATTCTGATTTTAACCAGAATTGTTCTCTTTTGAAAATTAATTTTGTATTATGCATTCTTGATTTGGTTCATCAGTAGGTGCTATTATTCATAAGACCTGTGATTCCAGTAGATTAGGGGAATTGATACCTTTTTGCAGTTTTGAATAAAAGTGTTGATAATTTCTAAATTATCATTTATAAAATTCTTAGAGCTTCAACATTTTGCGTCATCACAGGCTGATTTAGTATTGTTTTGTATTAAAATAGTCCTTTTCCCTTTCGTGCTGCCATTCATTCCGTGCCATTAGTCCTTAAAATGCGTTTAAAGAAGAAATAGCCAAGTTGACTGTTACACCTCATCCAAACAGATACATCACAAACATACGAGGGCGACAGTGCCTGGGATGGACGTGGTACTTCTCAGTCTGCCTGTTCTGAGAGAAGAGCAATTAGCATGGTCACGTCACCTTGTGCTTGAAGTGGAAAACTTTAAGATCGGAAAAATTTAAAGTCAGATCAGGGATTTACAGCTGTCTACTTTGGTAGTGCCTTAGGCAGCCTTTCCAGAGTAAATTCAGGGCCCCCTTGTTGCCTATGCCTTATTTAACATACTTTGCCTTATTAATTGTGTAAATTTTCTGGAAAATCATCTTCAATAAAATTTCTCCTAGTCTCTTTATATGTGTGGTTGGTAGTCATGGAAGTGACACATATGGTAAACCAGAAGCTTGGTTGAGATTTCGAGAGACTATTTTGTGGTTTTATGTCATATTTGATAATAAGTATGTAAGTTACTAATATATGAATTGATGTTAAGTATATCTTCCATTTGGATAAAGTCATTTCTTGATGTGTTACAATAGTACCTTGTTTTTATTTTTGTTCTTTCTTCAAATGATATTGGTCAAAAAGTTAGAAATAAAGTTAGTGCTTTAATCAGCCTGTA EMBV3_37229 CTGAACTGCTCCTTAGGCCTGTTTGTGCTGTCCGTATTTGCATCAGATACCTTTTCTCAG Gene GeneID:513423|SLC25A21:NM_001015587:17_cdna UTR3_Alt 2 NULL GeneID:513423 21 GENE SLC25A21 NULL solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 EMBV3_29131 TAGGAGGGGAGAGAGGCACTCAAGCTGGAACCCCCAAGGAGGAAATAACTCAGAGATTCT Gene GeneID:531673|CASC3:NM_001098069:154_cdna UTR3_Alt 2 NULL GeneID:531673 19 GENE CASC3 NULL cancer susceptibility candidate 3 EMBV3_42126 CAGGGTGTAGTCTGTTTAGATTCCGTAGTTCGTGGGTATCAGTTGCAGTAGAGGTGTGGG Gene GeneID:100138541|ODZ2:XM_002689363:16_cdna Constitutive 1 NULL GeneID:100138541 7 GENE ODZ2 NULL odz, odd Oz/ten-m homolog 2 (Drosophila) EMBV3_16156 TTGTTTGCTTAGTTTTGGCCCTTTGGCTGCTAGGCTGGTCTCAAGATGACAGTGCTCAGC Gene BVT0102_110139 - 1 EMBV3_32597 GK000007.2:67338607-67406283 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10217 TTCTTAAGTGCATGCAAATAATATTTTTTAAAGTATTCTGATTGAAGTTTGTGACATTCA Gene GeneID:526910|HTATSF1:XM_002699606:156_cdna Constitutive 2 NULL GeneID:526910 X GENE HTATSF1 NULL HIV-1 Tat specific factor 1 EMBV3_17757 ACCTTGAATGTGAGAAAATGGGTGGTGCCTGCAAGTATCAGAACACCCATGGGTGCATCA Gene GeneID:100337000|LOC100337000:XM_002698638:8_cdna Constitutive 0 NULL GeneID:100337000 27 GENE LOC100337000 NULL hypothetical protein LOC100337000 EMBV3_18957 ACCCCCTGCCTGACTCATCCATCACTTGAGACTTCGCTTCCATTGTGTGCGTGTTTGTTA Gene BVV0102_139596 - 0 NULL GK000006.2:30850161-31419268 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204841 TCONS_00204838 TCONS_00204844 TCONS_00204837 TCONS_00204839 TCONS_00204842 TCONS_00204843 TCONS_00204840 TCONS_00204846 TCONS_00204845 TCONS_00204836 1 XLOC_124533 Coding TCONS_00204841 XLOC_124533 Coding Coding PDLIM5 6:31333441-31567386 j TSS153135 4467 1 TCONS_00204841_4 595 0.0416386836803224 14 0.980965530212359 0.000559800672568078 5.86369942255669e-42 5.87790923766179e-07 0.000530167798262951 3.42320310416506e-05 0.000468074022542561 0.00018723290455827 2.09540361856557e-44 6.51518844411313e-58 0.00041125697702571 8.47419644323395e-05 2.99126842554177e-68 0.000248957249058005 0.000241766958443443 0.000244394835117747 0.00180428439708002 3.28678029151697e-07 1.46369378448037e-05 0.000553583855445711 9.3875609948109e-169 0.000251257249326426 7.04997102634512e-80 0.000246637775102536 0.000233052689943203 0.000197513277815871 0.000401645322176386 0.000340617451736203 0.000140592191111118 4.79087420471869e-05 0.00013885746726439 XM_005207722.1 PDLIM5 PREDICTED: Bos taurus PDZ and LIM domain 5 (PDLIM5), transcript 0.0 3860 100.00 0.478844862323707 NM_006457.4 PDLIM5 Homo sapiens PDZ and LIM domain 5 (PDLIM5), transcript variant 1, 0.0 2791 89.29 0.472352809491829 TCONS_00204841_4 sp|Q96HC4|PDLI5_HUMAN PDLI5_HUMAN PDZ and LIM domain protein 5; 0.0 1102 89.60 0.998319327731092 2 coding 1 1 1 1 0.213340154753922 0.181303399877269 -0.282834480089692 0.0139114975492767 CAGGAGGCGGAAGTTCCCGCGGGCCGTGGAGAAGGCGCAAGCACCGCGAGTCACTTGTCAGCGCTCGTCTGATTCGGAGGCATCGCGGCGCCGCACCCGAGTTTCTTTCATTTTGAGGGATTGGATTTTGCGTCATTAGAACCATGAGCAACTACAGTGTGTCCTTGGTTGGCCCAGCTCCCTGGGGTTTCCGGCTGCAAGGTGGCAAGGATTTCAACATGCCTTTGACAATCTCAAGTCTAAAAGATGGTGGGAAAGCATCCCAGGCAAACGTAAGAATAGGCGACGTGGTTCTCAGCATTGATGGAATAAGTGCCCATGGCATGACTCATCTGGAAGCCCAAAACAAGATTAAGGGTTGTACAGGCTCTTTGAATATGACTCTTCAAAGAGCATCTGCTACACCCAAGCTTGAGCCAGTTCCTGTTCAAAAGGGAGAACCTAAAGAAGTAGTTAAACCTGTGCCCATTCCATCTCCTGCTGTGTCCAAAGTCACTTCCACCACCAACATGGCCTACAATAAGGCCCCGCGGCCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCTGCCTTCACCCCAGCCCACGCGACCACTTCATCACATGCTTCCCCTCCACCCGTGGCCGCTGTCACTTCTCCCCCATTCGCTGCATCTGGACCGCATGCTAATACCAATGTTAGTGCTGACCAGCGGTCATCTGCGCTGAGCGCTGGTAAACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTGCCGAGACTGCCCAGGAGCTAGCGGAGGGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATGGCCCACCAAGAAAACACATTATGGATCGTAATACCGAGTTTTATCACATACCTACTCACAGCGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCGAGGACTGGAACGACTCAGTCTCGTTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATCTGAAAGAGTCTGAAGCTGATAATACAAAGAAAGCAAACAATGCCCAGGAGTCTTCTCTGCAGTCTGCCCCATCAGCAGGTGCAGCTTGGAGCTCCCCCGAGAGGCCGGGAAGCCCAGGCTTGGCCAGACCAGGGGTAGCCGGACTCACCACTGCTGCTGCCTTCAAGCCTCTGGGGTCCAGTGGGATCAAGTCACCAAGCTGGCAACGGCCCAGCCAAGCAGCACCTTCCACTGGAAGAGTCGTAAGCAGTGGGCCATCCACAGGAGCCGTGGCACCAGCCAACTCAGCCAGAGGGCAGCCTCAGCCCAGTGACGAGGACACTTTGGTGCAAAGGGCCGAGCATATTCCCGCAGGGAAAAGAACTCCGATGTGTGCCCACTGCAACCAGGTTATCAGGGGACCATTCCTAGTGGCATTGGGGAAATCTTGGCACCCAGAAGAATTTAACTGTGCTCACTGCAAAAATACGATGGCCTACATTGGATTTGTAGAGGAACAGGGAGCCCTGTATTGTGAGCTCTGCTATGAGAAATTCTTTGCTCCCGAATGTGGTCGATGCCAAAGGAAGATCCTTGGAGAAGTCATCAATGCTTTGAAACAAACTTGGCACGTTTCCTGTTTTGTGTGTGTGGCCTGTGGAAAGCCTATTCGTAATAATGTTTTTCACTTGGAGGACGGTGAGCCCTACTGTGAGACTGATTATTATGCCCTCTTTGGTACTATATGCCGTGGATGTGAATTTCCCATAGAAGCTGGCGACATGTTCCTGGAAGCTCTGGGCTATACCTGGCATGACACTTGTTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCTAAGAAGGACAAGCCACTTTGCAAGAAACATGCTCATTCTGTGAATTTTTAAAAGTCAACTGTCCAGGGGAAGAGAAGAAATTTGAAGAGAAAGAGGAGAATTTAAATTACCAATTAAATTTTAGATTTAATATTTATATGAAGTTTTGAAAAATAATAGTGGCCCTCAGGGGATAAATTCCAAGCTTTGAAAACCAAGTCTATGAGGAAATATTTGGCTTCATAAAGGAAAAAAATTATGTAGATACCATGTGAAGACAGAAATAATTGTGGTAAGATCGTGAATCCTGTTGATATTTGCCCAGTGAGAAAAGAGATTATGGCATTTGATAGTTTTTTTGTTTGTTTCCAGAATGGACAAAAGCCCATGATCACACTAAGTTATCACTTGGATTTGTTTGGGGAAGGGTGCTTTTATAGTTGAGACTGAGCCCCACCCCCTGCCTGACTCATCCATCACTTGAGACTTCGCTTCCATTGTGTGCGTGTTTGTTAGAGAGCAGGGTGTTAGGCTACAATATTTGTTTAACCTCCCTAAGAACTGTTCAAGGTATCTGTCCTGAAAGCTGCCAATTCATGGTCTAGCAGACTTACATTATATGCAGATAGTAATTAACTGGGAATAAAAAGAATGAGAAGTATGACACAGAGTAGCAAACTGAATGCTTCACCAACGGCAACCCAGAACTGTCCCCTTCCCCTGCATCTTGTAGGGACGCAGGGAGCTTTTTCTGTTGTGTTTTAAAAGCTGGAACTGAATCGTGCCATATTTCCAATTGCTGCTGAAACCACCCATAGAAGACACGCTGCATTGTCATGTATCTTAATGTCAGTCCTTGGCTTTACATGACATAAAATAAGGTGATGGTTTTGTTTTAGTGTGGTAGAGATTTTTTTGTTGTTTTTTAGTTTTGCTTCTACATAGTAAAGAGTCTGCCTGCAGTGCAGGAGACTTGCATCCCTAGACTCAGATCCAGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCTGTATTCTTCCCTGGAAAACCTCATGGACAAAGGGGCCTGGCAGGCTACAGCCCATGAGGTTGCTAAGAGTCGGACATGACTGAGCGACTTCACTTTACAGATTATATGCCCAGATATTTGATAAGTCAGCAGCATTGGAATGGCATTTGGGTATTTTGTTCAAAGAATTTTATTTGATCTGGATTTCTTATAAAGTTATATTAAGGATTTTGTTTTTAATTACACTTTGCTTTCTGCATATTATTCATGGAGCATAATGTTGCATTTCTCTAAATTTTATCCCTAAAAGAATAATGTCACTTCCTAACATGATTTTGTCTATGGCTTTGTCCTGTCTTTTGTCCTTTGCTTCTATGGCAAAGCCTTCTTCTGTCTATTTTTAAAACAGTTAATCCTGTGAAATAAGTACTGACTATAACCCAGAAGAATCTCTGTATTTTATAGTGGGGAATGCCATATTTAATACACCAGCATTAATCTTTTAATAACTGGCAGAGCACTTTATTCTTTTGGTGAGCTCCCAGAATATTTATTTTTCTGATTATAAATATTCCATGTCAGTAGCATTTTTGAATTGTTACCTCCTTATTGTAGAGCATTACTTTTAATCTCTCTCGATGTATATTTTGGAATGTTATGCTTAGAATAATACAGATTAAAATCACAGTATATGATTCTAAAACATCCCCTACTTGGTTCCCCAGTTTCTAAATGTTCAGCATGTCTACAAGGACAAAATGTTGCTCACTGAAGAAGCTGTCTAAAAATAATGCCCTCTACATGTGCTTGTCGCATTCGTATTTCCTATTGATTCACGTTATAGTTAGCAACTAAAATTAAAACCTGATCATTCGTCACTGTGCAAAAGACAAGCAGAAATTAGAGTTTAAATCTTCAAAACAGCATTATGTTTAAAAATGATTATAACAAAAACAGTATCCGTGGTACCGTTTTCAAGGACTGTTACTATAGAAAATACTCTTCCCTGTTCAAGTGTGAATCTAGAGTTATGTTAACATTTTGGTGATATTTGGGGTTTAGTTATTGCTATTGAAAGGAGAGGCTTTTCAGACATAAGGGAAGGGAAAACACACTGATTTTACACAATTTGATGTGTCTTCAGTTTGTCCTCCTTCAACCCCCAGATGTTTTAAGGTTATGGGTTTGGATTCTCAATATATCATTTACCGTATGCATTAGTCTCTACCTTCTGTTTCTGTGCATTTTTCAGTTTGTATATGTCCATGCTATTTTGCTTTTGGATACATTTTCTAATTAAAAACCACATGAGAAATATAATCAGTATATAAACCTTAATGTGCACATAATAAATAAATGGCTGCAGTGATACAAACAAGTTCTCTTGGTTTTTCTTTTTGGGGGACAAGAGGTTTCTATTAAGTCATCAAGGGAAAAAATAATGTTCATGGGATAGGCTGATTCTCAGGAGAATCCCTCCTTTATGGTATTTGCCTATCAGAATGTCCCGGAAACATAATATATTTGAAAATATTGTCACAATTATTTTATTTTAATCCATATTTATGCTTTGCATGTAGCATGTACACAATAAAT EMBV3_03685 GTGTTTGGGGCTGGTGGTCATAGCGTGGCTCTCTGGCTTCATGGTAGGTGTAGTGATTAT Gene GeneID:523769|LOC523769:XM_002697401:79_cdna Constitutive 0 NULL GeneID:523769 23 GENE LOC523769 NULL similar to Olfactory receptor 11A1 (Olfactory receptor OR6-30) (Hs6M1-18) EMBV3_16982 TTTTACAAAATAGGGACCAAAATTTGAACACTTGGAGAAGGAAATCAAGGAACTAATTTC Gene GeneID:512714|LRRC34:XM_002684932:90_cdna Constitutive 4 NULL GeneID:512714 1 GENE LRRC34 NULL leucine rich repeat containing 34 EMBV3_24552 CCGGTGCAAATTCAACCAGCAGCAGAGGACTGGGGAACCTGATGAAGAGGAGGGAACTTT Gene GeneID:616139|FXYD1:NM_001076410:751_cdna Constitutive 0 NULL GeneID:616139 18 GENE FXYD1 MGC127681 FXYD domain containing ion transport regulator 1 EMBV3_05373 CCTGATGAGGACTGTGATCAGAAAGTGGAAAGGGATGGAGGAGGGAGTGAATCATCTATG Gene BVT0102_062559 + 0 NULL GK000002.2:4461738-4541471 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29703 CGAGGTGCTGATGTCTTTTCTCCAGATGTCTTTGGACGGACTGCGGAAGAATATGCTGCT Gene GeneID:522845|LOC522845:XM_002692111:3_cdna Constitutive 0 NULL GeneID:522845 13 GENE LOC522845 NULL similar to ANKRD protein EMBV3_17399 AGAAAACGCTGAGTTGACTGCACAGATGGAACCCGCTGACCCTCAAGAGACTAAGACCAT Gene BVV0102_186990 + 0 NULL GK000019.2:27815344-27901944 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169409 TCONS_00093074 TCONS_00169413 TCONS_00210440 TCONS_00045930 4 XLOC_103356 XLOC_057071 XLOC_128950 XLOC_026577 Coding TCONS_00093074 XLOC_057071 Coding Coding - 19:27886901-27891732 - TSS69915 2319 1 TCONS_00093074_5 124 0.134109529969815 2 0.520289855072464 2.75193548498967e-06 3.0725567105295e-05 3.89075123269535e-05 9.54911375707921e-07 4.56217242602327e-06 0.000157352384425572 1.92688808839989e-05 6.87017400898967e-05 6.80477434087688e-06 5.72196854150328e-05 9.87142120768925e-06 3.08381719667613e-07 9.89834451040077e-06 1.01422856866466e-06 1.19912327392835e-05 0.00475755402373939 0.00191636982378832 0.00195530013699725 9.04115957717096e-05 5.97955408258542e-05 6.90896955768733e-07 0.00176735366917894 0.000225626284026267 0.00192027055274531 6.82902072893928e-06 9.70259891354643e-06 9.16939953816003e-06 0.00019090584202574 0.000158052329126496 0.00016558041305931 XR_238659.1 LOC101902384 PREDICTED: Bos taurus uncharacterized LOC101902384 (LOC101902384), 0.0 2259 100.00 0.539456662354463 TCONS_00093074_5 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 3e-23 95.5 43.75 0.879032258064516 1 noncoding 0 0 0 0 -0.182001319589134 0.303682127220271 0.0228346842140227 0.654576793358075 ATCCTCACCTGATCAAGCCCACCAAGGCAGAACGGACTTTAAGGTAGAAACAGTCTTGGACCACGTTGTGTTCTGGTTCGGCCTTGCTGACCGGCAGGTGAAGACACGCCGATCCCCCTTCTCCCTCTGGGATCTGGCAGGATTTGGACAAGGATAACCTGCCCCTCCCCCATACTGGATGACTCGCCCACCGGCCCAGTGCTCCACCAGGACGGAGGCCGCCTTAATTCCAGATCCAGGGCCAGGTGAAGTTCCTGCAGCAGCTGCTGCTCCACCACCAGCTCTCCCACAGTCGTAGAGACGCCACCTTGGCAGGCTCCGATCTGGTGGCAGAAGCCTCTGGCCAACACTTCCAGGATCTGGCTCCAGCCGAACAGCCCAAGCTATACCCGCTTTTCCCGTTAAAGTTGCAGGTATTGTCCCTTGGATCCATCATACGAGGGTGAAGAGAACATATCACGCAGACCCAGAAAACGCTGAGTTGACTGCACAGATGGAACCCGCTGACCCTCAAGAGACTAAGACCATCCTTAAGAAGAAGGAAAAGATGATCCCAGACGAGCCCCTTGAGGATGAAGCCACATAATCAACTCCTGCTGCTTGGTCTCATCAACGTGCACATTCCTATGCCAACTTCCACAATTCTTCCAACTGTTGGGTATGTGGGGCTATGCCTCTGTCTGTGATGGATGGACTTCCCTGGTGGCTGTCACCGCTCCGCCAAGGAGATTTTAAACCACTCTGCTCTTTTCTGGGACACAATCATAATCTTTCCCTGCTCTCTGGGTGTAAGCCAGACCTACAGTCAATAGATTCAGGTCATAGGGTTACATTTGATATAAATGCCAGTGTAACAAAAGCCTAACCTACAACAAGCCCTGGTAAATCTACCTTATTTACATGCTAGGTGGCCAAGATCTGTGTTTCAGTGGTATAAGTATATTGCTGCCTTATTCATACCCTCTATAGGGACAATAGATATTATGATTAAAGTAGAAGCCTTGACTAATTTCACAAAACAGGCCCTCCTAGATAAAACAAAAGCCATCCAAGCCTTAAATGAAGAGCACATCCAAATGAGAAAAGCAGTAATTCAAAATAGAATGGCTTTGGACATACTCACAGCTGCTCAAGGAGGGACCTGTGCTATAATTAAGGTTGAATGTTGTGTATGCATTCCTGACTTATGGGGCAATGTATCAACTGCTTTAGATGTCATGAAAAACCAGGTAAAAGCAATGTCAAATGAAAACGTTCCTTTCTGGACTTTGGTCCTATCTTGGGTGAAGGGCGATTGGTGGAAAACTATATTTACCATTGTTATAGTTGCCTTGATAGTTCTGCTTTGTGAACCCTGAATTTTACAATGTATTCAATGTATCCCTATGAATGATGCTCATAATATGAATTAAGAGCATCAAGATGGGAGAATGAAGGAGGAAACAGACAGAGCTGGACTCCATCTTAGGCCTGGCTGCGAACATTAGGCTACACGCATGGTCACCCTCCCAAAGGACTCTGAACTTTGTGCCCGGTGTCTATAGAAATGGCATACCCATGGAAAACCAGACCCCTGGATAAAAGAGCCTCAAGACTTGTACTTGGATTCTCCTTTGCCTAAAAGAGTATGCTAATTATCTCTGTAACAGAACAAAGTGGTAAATTCCATTATGTTTATCCGGATATGACCCCAGACCTATTGATAAACATCCACTGTTTATCTAGTCTTGTGACACAGGAATCATGGGTTAACTTTGATCCCATCTCTCTTTTACCTTGTCCAGACTAGTTTCAAGGAATTTGGGGAGGTGGGTTTGAGCAAGTACACTTAGGGTATATGAGGCTTCCCTGGTGGCTCAGACGGTAGAGCATCTGCCTGCAACGCGAGAGACTCAAGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAACATTCCATGGACTGAGAAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAAGAGTCGGACATGACTGAGCAACTTTGCTTCACTTAGGGTATACAAGGTTTTCACAAAAAACTGGTCAGGTTCCTTGGCTAAGAGGAGACTCTGCCTTGGGCCCGCCGGTGTAATAAACTGCACTCCACTATCTGCATTGTCCTTCCAAGTGAGTTTGTTTTCCGGAAGGCATGGCTACAACACTGACAGGTTGCATCCTAGACTATTTGAATCCCTTACCTGAAAACCCTCATTTTTCTGTTGTTGATTCTAAGTTATTATATTACAACCCTTCCCAACCCTACCAACCCCTGTTCCTACCC TCONS_00093075 s 5' 1023 TCONS_00093075 s 5' 5853 EMBV3_41469 CAAACTTTAAGTCATCTTGTTTCCTGTTAGCAATATCATACCTTCTAAAGCTGTTCACTG Gene GeneID:540212|NAA20:XM_002692139:118_cdna Constitutive 2 NULL GeneID:540212 13 GENE NAA20 NAT5 N(alpha)-acetyltransferase 20, NatB catalytic subunit EMBV3_14801 GTGTGTGTGAGCTGTTTTATCTCGGGACTCACTAAGGAAAAAAACAAGAACCAGGTGGTA Gene GeneID:523214|LOC523214:XM_002697511:220_cdna Constitutive 0 NULL GeneID:523214 23 GENE LOC523214 NULL similar to histone cluster 1, H3f EMBV3_34447 TAGACACCTTCTCGAGTGGGTCTTAGCAGCCCAGGCATAATTAGTAAGCGTGGTGGGTTC Gene BVV0101_031688 + 0 NULL GK000009.2:102676023-102827378 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199375 TCONS_00070449 TCONS_00223729 TCONS_00223718 TCONS_00201908 TCONS_00063596 TCONS_00062707 TCONS_00032895 TCONS_00112239 TCONS_00219910 TCONS_00187642 TCONS_00223721 TCONS_00062709 TCONS_00187683 TCONS_00196787 TCONS_00010220 TCONS_00223724 TCONS_00223736 TCONS_00087333 TCONS_00070447 TCONS_00223726 TCONS_00054100 TCONS_00201912 TCONS_00142119 TCONS_00223727 TCONS_00223722 TCONS_00201910 TCONS_00152632 TCONS_00070444 TCONS_00223732 TCONS_00232662 TCONS_00112243 TCONS_00140816 TCONS_00125029 TCONS_00152623 35 XLOC_121028 XLOC_042227 XLOC_137028 XLOC_137017 XLOC_123553 XLOC_038322 XLOC_037434 XLOC_019131 XLOC_068136 XLOC_133227 XLOC_113687 XLOC_137020 XLOC_037436 XLOC_113728 XLOC_118452 XLOC_005772 XLOC_137023 XLOC_137035 XLOC_052448 XLOC_042225 XLOC_137025 XLOC_031909 XLOC_123557 XLOC_086544 XLOC_137026 XLOC_137021 XLOC_123555 XLOC_092397 XLOC_042222 XLOC_137031 XLOC_142147 XLOC_068140 XLOC_085245 XLOC_076571 XLOC_092388 Coding TCONS_00232662 XLOC_142147 NonCoding NonCoding - 8:74713116-74713985 - TSS174166 869 0.512082853855006 1 0 0.000390882365057933 5.16881866324411e-05 5.97769106068528e-05 0.000226325648035033 8.48516290361249e-05 0.000589118139880057 0.000125029251671921 0.000347532785831096 0.0011946272310935 4.28578211645875e-05 3.91741301228703e-05 7.81794645685262e-06 9.20891443095466e-05 0.000215688407673902 0.000119899988893018 0.000180815563265907 8.80657980198507e-05 6.73708753187649e-05 0 3.66949705484446e-05 1.1210676265927e-05 7.60883866058657e-05 0.000124836841990191 0.00103253540075972 4.85780391224018e-05 0.000287389802875664 0.000217107540533089 1.61040281010239e-05 8.52075547383946e-05 8.90921703911099e-05 XM_866575.4 NEK11 PREDICTED: Bos taurus NIMA-related kinase 11 (NEK11), transcript 3e-45 187 93.50 0.140391254315305 0 noncoding 1 1 1 1 -0.181054180806723 0.137415218248932 -0.881223264880601 3.80822844220677e-05 GACCAATCAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGCCCTCTCGAATAGCGAAAGGTGCCTCACCCTAGACACCTTCTCGAGTGGGTCTTAGCAGCCCAGGCATAATTAGTAAGCGTGGTGGGTTCCGCGCTCCAGATGGAGACTCAGCTGGAAGTTAAAGGGAAGAATGACAAGGAACTTTATGAATTGGAGCTGTAAGTTAACACTTTGACAGAGAGAGCGAGATGGTGGTGGGGGACAGCCCCCAGTGAAATCACAGGTGAGAGCATAAAGCAATACAGTAGGCAGACTCCGGTTTTTTTTGGGGGGGGAGATGCTCGAGAATATCCGGGTGGACTCCTGAGGCTCGATCCCGCATTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCCAGAGTGGAATGCCTCCCCGACTCCCGGCACAGGATCAGTGCATGCTCAGTGACGATATCAGTGCCTGCTCAGCCACGTGATCACTGACGGCACAGTCACGTGATCAGCGCCTCTCAGTCACGTGATCACCGTATGCTAAACACGTGATCAGTGAACGACCAGCCACGTGATCACTGCATGCGCGGTCAGGTGTTCAGTTCCTGATCAGCCAGCTGATCAGTGCGTGCACAGTCCCCTGATCAGCGCCTGTCAGTCACTGATCACTGCCTGATAAACACGTGATCAGTGCCCGAACAGCCACGTCATCAGTGCATGCGCAGTCACGGGATCAGTGCATGAGAGCCACGTGATCAGTGCGTGCACAGTCCCCTGATCAGCGCCTGTCAGTCACTGATCACTGCCTGATAAACACGTGATCAGTGCCCGAAGAGCCACGTCATCAGTGCATGCGCAG TCONS_00225866 . 5' 119646 TCONS_00225866 . 5' 119646 EMBV3_39254 GAAGTGTCCGGCCATCAAGGAAATGGTGTTCCAGTTACAGCGGGAATGCTACCTGAAGCA Gene GeneID:540573|STC2:XM_002696256:27_cdna Constitutive 0 NULL GeneID:540573 20 GENE STC2 NULL stanniocalcin 2 EMBV3_01915 CCTTGGAAAAGTGAGAAGAAATGGCACACCCATCACAAAACATACATAGTTTAAAAGTTG Gene GeneID:538640|ESRP1:XM_002692816:145_cdna Constitutive 2 NULL GeneID:538640 14 GENE ESRP1 RBM35A epithelial splicing regulatory protein 1 EMBV3_36065 TTTCTTCTACCATCCCAAGTCCTGCCTTGCGTTTCATGAGTGGAGCTCACAGGGGACCAA Gene BVV0102_434914 + 0 NULL GK000025.2:25852496-25881960 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18526 CAACAAAAATTTGCCGGGATCTGGTTATTCAAAGGGTCATGCAGCTGCGACATAAACCGA Gene GeneID:513006|NKG7:NM_001035279:38_cdna Constitutive 0 NULL GeneID:513006 18 GENE NKG7 MGC129125 natural killer cell group 7 sequence EMBV3_31634 GGAGTCCCAGGCCAGATGTCCGTGAAATCAATCAGCAGCTTTGGGGAACTTGTGTATAAC Gene GeneID:100295746|LOC100295746:XM_002690034:28_cdna UTR3_Alt 1 NULL GeneID:100295746 9 GENE LOC100295746 NULL hypothetical protein LOC100295746 EMBV3_07271 CGGCCGCGGACAGGCAGTTTCTCCTTTCGGATCATGCATGCGTTCACCAACATCAAGAAG Variant GeneID:525510|LOC525510:XM_002695046:374_cdna 625^708 2 EMBV3_39369 GeneID:525510 18 GENE LOC525510 NULL similar to F-box protein 27 EMBV3_11942 GCAGATGTCTTAGAAACTTACCATGCAAAGGTAATTAAAAAAATGTCTCCAACTTCACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31559 ACGGCGTCCGCTCGGTGATTGAAGAGAACATCAAGTACATCAGCAGAGACTACGTCCTCA Gene GeneID:281590|ACACA:NM_174224:176_cdna Constitutive 0 NULL GeneID:281590 19 GENE ACACA ACCA acetyl-coenzyme A carboxylase alpha EMBV3_42857 GCGGCCGCCGGCGACCTGACCAGTGAAGAGAAAACCTCGACTTGTTGTATAAGTACATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32808 GGCTCAGGAAAAAGCTAGCCCCTCCAATGAGATGCGACTCTAAATCTGCTCCCCAAAGCT Gene BVT0102_141633 + 0 NULL GK000002.2:41491256-41697068 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105118 1 XLOC_062509 Coding TCONS_00105118 XLOC_062509 Coding Coding KCNJ3 2:41361136-41496817 j TSS77665 6200 1 TCONS_00105118_15 501 0.143548387096774 5 0.954341096698113 0.000255379733822984 0.000344374076590172 0.000419261624278807 0.000177233010303621 0.000185408152217933 8.33433385285478e-05 0.000269247063710073 0.000331713449842954 0.000255260109348089 2.30806696507214e-05 1.96894406711573e-06 2.71059915296235e-05 3.04381352564959e-06 4.98968852259033e-06 2.5619229171741e-05 0 0 0 0.00023886452218411 0.000305660925970953 0.000257368190254016 0 0 0 0.000984298515812272 0.000718731136953648 0.00028667351141599 6.04196234759082e-05 1.08185121482521e-06 1.93943768014733e-07 NM_001192624.1 KCNJ3 Bos taurus potassium inwardly-rectifying channel, subfamily J, member 3 (KCNJ3), mRNA. 0.0 2828 100.00 0.252741935483871 NM_002239.3 KCNJ3 Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 3 (KCNJ3), transcript variant 1, mRNA. 0.0 2553 94.94 0.261129032258064 TCONS_00105118_15 sp|P63250|IRK3_MOUSE IRK3_MOUSE G protein-activated inward rectifier potassium channel 1; 0.0 1039 99.40 0.998003992015968 0 coding 0 0 0 0 -0.0341017678359248 0.817943452483847 0.0130357325976891 0.798809909615961 AATTTGGACTTCTCGGGGGCAGAGGGTTTTTTCTTTTACATTAAATATACTCTTTTCTCCACACTGTTCTGTTATATAATAGGGTGAGTGCAAGTGCAAAGTCATGCTTTTTCAGTATTAAAACACAGAATCATATCCTTCATTTTTAAAGTTACAGTTATTCGTGTTATTACTAATTTTGGACACAGCAAATAAGACATTGCCAGAATCACTTTCTGGGAAGAATAAATGTGTAGCTTGTTTAGAACTGAGTTGGTTGTTAAATATAGCTTTGATTCCTTCCCCTCCTCCAGCTAAGAACTGCATGGTAGTTTTGTTGATAATCTACCACCCTGTCTTTAAATGGTAGCTTGTGTATTCTCCAGTTCTATTTTCCACATTGTTCTGGCTTTGTGGCCTTGGCTGAAACTGTGTGCCTCTCCTGTCTTTGACCCATTCTGTCCACAGTGTTTCACTTCAGTTCATCAGACAGCACCTGATTAGGTGGCCTTCTGTCATCCATTCTCTACACGTCTTGCCTGACCTCAGCACCGCGGGGCTGGCTGCTCTCCAGAACCTCATCATGGAAGCAGCTGCCCTGACAGGGGAAGATGTGCTTGGTTCATCTTTAAACATTTTCAAGGAGTGGGACTGGATGTCACAAAGAGGTCAAAGGCTCAGTCACATGTAAAGTGTGACAATGATGGCATCCTAAAAAATCTTTAACTTATCAGGCAGTACTGTTTCTCTCCAAGAGATACCTTGAAAATGGGGAGACATGCTTTGGGATCTCGTCTCTACCATCTTGCAGGCTCTGAAACAGGAATAGTAACTGTAAAGTTCCAAGCAAGTTTCCTGGCATGTTACAGTAGGCTCAGTAGTTTATGTTCTTTTTTAAAATGTATTAAATATTTAACTTTGCAAGGCAGGGTTGGGTAGCTGGAGTGCTAGATGGTATCTAAATATCAAGAGGTGGATGTTCAGGGTGTTTACCATTTTACAAGGGAAATCTTGGTAAATTCTGAACTCAGGCACAGGCCAGAAAGTAAAAGCCATATTACAAATCTAGGGGAATTAGAATTCAAAGAAGGGATGATTGTGGCTAGGGGGAGCATAAGGTAAAGCTGGGGGAGATGGCACTTGAAATAAAAACTAAGAAATTTCCCCCTTCGCTTATGTATACACTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACAGCAGCCCACCAGGCTTCCGGTCCCTGGAATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCAGGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCATGTCCGACTCTTAGTGACCCCATGGACTGCAGCCTACCAGACTCCTCTGTCCATGAGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCATGTATACACTAGAGATGGTAATTTGGACTTTTCAGGAATAGAAAAAGAAAACTTAAAGTGACAGGACAGACGTTGAGCAAATGCAGTTAATGTTCAGGAAATTGCAGAACCAAAGTTGTCTGAATCAGAGACCACATTAAAGGGAACAGAGGAGATAATTTTGGAAAGATAGGTTAGGCTATATTCTGGTGGACCTTAGATCTCAACCTGTATGAGCAGTGTGGTGGAGTGGAGGGAGACCCTGGCTGTGGAGCAGGAATCCCAGATTCCTTTCTATGCATCTGGGAAATGATGGCAGAGCAACCAGGTTCTAAAGAGTCATTGCTTTGGGTTCAAATCTCAAAGTTTCTACGTATTAAGTCTGTGACATTGACCCAAGTGATTTCCCCCTTCTAGCCTCTAGACTAGACTATGCTTCTTAACATATAAACTTGTTTATAAATTTGGTTGTTGGTTAGGGACTTTGGGAAGGTCATGTACACACTGCTATATTTAAAATGGATAACCAACAAGAGCCTATTGTATAGCACATGGAACTTCGATCAATGTTATATACCAGCCTGGATGAGAGAGGTGTTTGGACGGAATAGATGTATGTATATGTATGGTTGAGTACCTTCGCTGTTCACCTGAAACTACCACAACATTGTTAATTGGCTATACCCCAATACAAAATAAAAGTTTAAAGTTTGGGAAAAAAGATTGGGTGTTGGAAAATGGCAAAGGTTTTTCATAGAAAAACTTTTTTTTTTTTTTTAAGTGGGAATGTTTAAAAGCTTGGAAATGATATAATTAAATGAAATAATCAAATAACTCTTTGGTTTCCATGCCACTGATAAATGGATAAGATTCTAAGGAGACAGACCTAGTAATATTACCTAGGACAGCCTGAAGGAGTAAAAGGCTAAAGGTAAGAACATCATTTGACTTTGGGTCTAAAACGAAATGACGATTTGAAGAAAGTAGCATTTAAAAAAGAGAGATCAGAGGGACAATCAAAGGATTTGGCAACTGACTGAATATCAGTTTGAAAACTAACAAGCACAGGAAGGATTGCTTTAATTTACGTGCTTTTTTATATTAAATTATTTAAGTGACCTGATTTAGGGATAACTTTTAATTTTGCATTAGTACATGTGGAGTTTCTAGTGATATATGTATGTTGGTATATGCTACTGATCGAATAAGTATTTATTGTGGACCCAGTACATGACAGATAGTGTTCGAGGTGTTAGGGACAAGATGTGTGCTTTTCCATTCCAGGACTCTGACAGAATGAGAGAGAAACAGGAAACAAATGAAGAAAATAGTAGCTGGAAAAAGAAGTATCATGAAGATGAACTAAGTTGATGTGATAGGGGGTAGATGAGAGGCTAGTGAAAGAGCTCCTTAAGGAGGACACATTCAAGCTGAGGTGAATGATTGAAGAAATCAGCAATATGGAATGCCATGGCAAGAACATTTCAGAAAGAGAACACAGATAAACAAAGGTCCAAGGATGAGGATTATGCCTCATTAATAAAACCACATTCATTCTCCTTTTCAGGTATCAACTTTGGGAAAATGTTCAAACTCCTAATTTTCCAGAATAGAAAGCTGAGGGTCAAAGACGTTGTGTGCAACTTGTTCAGGGTCACACAGTTTGTAAATAGCAGGGCCAAAACTCAAATCAGGTCTATGATCCAGGCCCAGAGAAATTTCCACTTCCCACAGGGTCACTTTCCCTTCTTACGTAATCCTAAAGAATCACAGTCACTGACCTCTTATCAGACAGCCTGCAGGAGAAGTCTGTAACCTGGCGTAGGGATTTTAACCAAACCACAGGGCAAGAGTCCTCTACTTATGGCTGACCTGCACTAAGGTTGAGAGAGAATTAGAAGAGAGCACCTATTAGAAGAGAATTAGTATAAAGATTCATTTTCCTTTGCCTGGGAGTCTTACAGCAGCCCCTTGTTTTCATAATCCCATGATTTGATGGTTTTCCAACAATTCAATTTTATGGATCTGGAATGAATGGAATATGCCATAAGAGACCATGGCATCTTAGAACAAACATGAAATGTGGTAAACAAACTGATGTTTCCACATGGGCGCTATATTAGCTATTTCTGCACTTTGCCCTTCCATTAAGTTAACTGCCAGGCCTGGGCTGTTAAAATCCAGCCTTCATCCTTCAATTACAGCCACACATTAACTCCGGACATTCTGAGCCTTTCTAATAGAGCCATTCTCAGGCAGGACTGTGAGCTCTCCTAGGAGTGTCTCCCGTCTCTTCTGTTCCCATCTTGAGCCCCCTCTGCTACTGGCAGCTCTGAGTTCTGAACAGGTTTATCACGAAGCCAGTTGCGGTCTCTCTTTATGGTGCATCCTTAAACCCAGGCATCCGTGTAAAGGAGAGCCCTAGTTATACAGACACATTATACTTCTCCCCTTTCAAAGAAAAGCCTTTCCTGCTTGTTGGGGGGTTTCTGCCTGATGCAGAGGGGCAAGGAAGAAGAGTTGGCTAGCTTTGGGGAGCAGATTTAGAGTCGCATCTCATTGGAGGGGCTAGCTTTTTCCTGAGCCGCCAGACACTGCAGGCTCAACTGAGGCGCGGAGGTGCAATTCAGGCTGGTGAAACAGCGGGGGAAGCAGGACAGGCGGGGCTAGCGCGGCTCTGCAGCGGATCACAAGCACCCGCACACACACCACTCTCCCGCCGCCCCCGGCTCGCGCCTCGCTCCTTCCCACCCGGGCCGCAGAGACGCGGACCGGGAGTGGGGGGCCAGGGAGGGAAGAGGAAAAAGGCAGGCGCCGTGAAGCCGAGGAAAAGCTGGAGCGGCGCTGGTATTTCACCTGAGAGTCTGACCCGAATCCCGAAGCTCAGACCCCCTTCAGCAGCACCTTTGTCGGCAGCTAGGAGAGCGCGGCGGTGCCCAGGAACCCTCGAGTCCCGCTCCCAAGTCTTCCTGTGCCCGGTGCACCAGGATCCTCCCGGTGGGGGCCGCGCGGTGCCCCCAGGAAGGCGCGGAGCTTGGGGGACTGGCGTTGGCGCCCATCGTGGTGCGCCGGGAAAAGTGGAGGCGAGAAGAGCCTTGAGGGCAGAGTGCGAGGCCCTGCGGCCGCTGCCGCCCGCGGCGCCGCCTCCTGCCCTCTCCCCCAGGCGCTCGGCTCCTGCGCCTTCGCTTCGCGTTTGAATCTGGCTCGCCCCTCCGTATTATGTCTGCACTCCGAAGGAAATTTGGGGACGATTACCAGGTAGTGACCACCTCGTCCAGCGGCTCGGGCTTGCAGCCTCAGGGGCCGGGCCAGGGCCCGCAGCAGCAGCTTGTGCCCAAGAAGAAGCGACAGCGGTTCGTGGACAAGAACGGCCGGTGCAATGTCCAACACGGCAACCTGGGCAGTGAGACGAGCCGCTACCTCTCGGACCTTTTTACCACCCTGGTGGACCTCAAGTGGCGCTGGAACCTCTTCATCTTCATCCTCACCTATACAGTGGCCTGGCTCTTCATGGCGTCCATGTGGTGGGTGATCGCCTACACTCGGGGCGACCTGAACAAAGCCCACGTCGGCAACTACACGCCCTGCGTGGCCAATGTCTATAACTTCCCTTCGGCCTTCCTCTTCTTCATCGAGACCGAGGCCACCATCGGCTATGGCTACCGCTACATCACCGACAAGTGCCCCGAGGGCATCATCCTCTTCCTCTTCCAGTCCATTCTCGGCTCCATCGTGGACGCCTTCCTCATCGGCTGTATGTTCATCAAGATGTCCCAGCCCAAGAAGCGCGCGGAGACCCTGATGTTTAGCGAGCACGCGGTGATCTCTATGAGGGACGGGAAACTCACGCTCATGTTCCGAGTGGGCAACCTGCGCAACAGCCACATGGTCTCCGCGCAGATCCGCTGTAAGCTGCTCAAATCTCGGCAGACACCTGAGGGTGAGTTCCTTCCCCTTGATCAACTTGAACTGGATGTAGGTTTTAGTACAGGGGCAGATCAACTTTTTCTTGTTTCCCCCCTCACGATTTGCCACGTGATCGATGCCAAAAGCCCCTTTTATGACCTATCTCAGCGAAGCATGCAAAGTGAACAGTTCGAGATTGTCGTCATCCTAGAAGGCATTGTGGAAACAACTGGGATGACTTGTCAAGCTCGAACATCATACACCGAAGATGAAGTTCTCTGGGGTCATCGTTTTTTCCCTGTAATTTCCTTAGAAGAAGGATTCTTTAAAGTTGATTACTCCCAGTTCCATGCAACATTTGAAGTCCCCACCCCACCTTACAGTGTGAAAGAACAGGAGGAAATGCTCCTTATGTCATCTCCTTTAATAGCACCAGCCATAACTAACAGCAAAGAAAGACATAACTCTGTGGAATGCTTAGATGGACTTGATGACATTAGTACCAAACTTCCATCTAAGCTGCAAAAAATTACTGGAAGAGAAGACTTTCCCAAAAAACTCTTGAGAATGAGTTCTACAACTTCTGAAAAAGCCTACAGCTTGGGCGATTTGCCCATGAAACTTCAACGAATAAGTTCAGTTCCTGGCAACTCAGAAGAAAAACTGGTATCTAAAACCACCAAAATGTTGTCTGATCCCATGAGCCAATCAGTGGCTGATTTGCCACCAAAGCTTCAAAAGATGGCAGGAGGAGCAACCAGGATGGAAGGGAATCTTCCAGCAAAATTAAGAAAAATGAACTCTGATAGATTCACATAACAAAACACCCCTTCAGGCATTATTTATTGTTTGATTTAGTAATAGTCCAATATTTGGCTGAT EMBV3_14179 GGATCTCTGCCAGGCAAGGCTGTCTTAGAGAAGAACCCCAAAGTCAAATTGTGGTCTACT Variant GeneID:100139217|LOC100139217:XM_002696162:110_cdna 200^478 2 EMBV3_15575 GeneID:100139217 19 GENE LOC100139217 NULL similar to hCG1818127 EMBV3_15137 CGCCTTTGGACGGGAGATGCTGAAGCGAAATATTGGTGTAGTTGTGGTAGGATTTCCTGC Gene GeneID:537972|SPTLC2:NM_001099081:117_cdna Constitutive 0 NULL GeneID:537972 10 GENE SPTLC2 MGC159388 serine palmitoyltransferase, long chain base subunit 2 EMBV3_18033 CTGTTACCAAAACCGAGTACCATTTACGAAGTGGCTCTCCTTGTTTACACATATCCTGGG Gene GeneID:533791|NSUN3:NM_001076001:96_cdna Constitutive 0 NULL GeneID:533791 1 GENE NSUN3 MGC142518 NOP2/Sun domain family, member 3 EMBV3_29964 CAAAAGAACACTCCAAAAACTGAGATGAAAACTTGCAGAGTGGCAAGATTGAAGCAATGC Gene BVV0102_247784 + 0 NULL GK000013.2:33665130-33713675 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31782 AGGAGGCGGAGGGGGAGGGTAAATAAACCACTGTGTGTCTGGGTTTAATTTGAAGATTGC Gene GeneID:540643|LMNB1:NM_001103295:46_cdna Constitutive 0 NULL GeneID:540643 7 GENE LMNB1 MGC165937 lamin B1 EMBV3_20429 CCACCGACAGCAACAAGCAGAACCTGCGGCAGTACTTTGAAGAGGCTTTTGAGTTCATCG Gene GeneID:541175|DUSP10:NM_001034725:98_cdna UTR3_Alt 3 NULL GeneID:541175 16 GENE DUSP10 NULL dual specificity phosphatase 10 EMBV3_39558 TTACCCAGGGGATGGGAGACACCACCATGAACCTCAGCTCTCACCTGCTCTGTACTATAA Gene BVT0102_051377 + 0 NULL GK000022.2:15161633-15190716 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126179 TCONS_00126171 1 XLOC_077384 Coding TCONS_00126171 XLOC_077384 Coding Coding TRAK1 22:15026745-15168903 j TSS94717 5137 1 TCONS_00126171_3 596 14 0.96396237962253 0.00136577641429069 0.000797846005890045 0.000597583139945458 0.000406094941629063 0.00026965420446521 3.70493079686974e-05 0.000142700898451519 0.000420026363309403 0.00158537136557161 6.74234730138145e-05 2.78670074115013e-09 8.67839022537549e-23 0.000329133812813811 5.06175584423652e-08 0.000742000363472216 0.000831123534813346 7.85128904471976e-09 0.000211792376839452 0.00074815179570743 0.000408845397083114 5.36012707287273e-13 2.58326379812745e-24 1.4010031956528e-09 0.00016966056143018 0.00136266771897958 0.000769798486011846 0.000224211382560518 1.54616010290322e-06 9.15508461753315e-10 7.42948114495101e-17 NM_001077986.1 TRAK1 Bos taurus trafficking protein, kinesin binding 1 (TRAK1), mRNA. 0.0 2289 99.92 0.247420673544871 NM_014965.4 TRAK1 Homo sapiens trafficking protein, kinesin binding 1 (TRAK1), 0.0 3635 79.70 0.788592563753163 TCONS_00126171_3 sp|Q9UPV9|TRAK1_HUMAN TRAK1_HUMAN Trafficking kinesin-binding protein 1; 0.0 976 90.74 0.85738255033557 2 coding 0 0 0 0 -0.154794850339088 0.437109306918102 -0.0282241431347563 0.556724586911916 GAGCCTGCCGCGTGCGCCCCGGTGCCGCCCGGCCGGCTGCTGTGGAGGGAACCGGAGCCGCCGGGCGGCAGGGACTGGGCCGAGGACAACGAGGAGGAGGCGGCCAGGAGAGCCGATCGCTTGGGCAGCCCGGCGCCGGAGGCCCCCAGGATCGCGCCTGCTACGGGGCCGCGCTCGGTGCGCCTCTCGAGGGTTCCCCGTGAGGAGCTGCTGCCAGTGTGCCCGACCTCCTGGGGGCTGTCTGCCCGACTGCCCCAGACTCCAGCAGCGGGGCCACCGATGGCAGTGGGCACCTCCCCGTGAAACCTGCCAAGCTGGACGCCACAGCTCTGCACGACGACGCTTTGGCCAACTCTGTGCCCCCTTCGGAGGCGTGCAACCATGCAGTCCTAGCCTGCGGCCTGGGCATCCCCGAGGAGCACTATGTGAGCGAGGCCGTGGAAGATGCGCCCAGCTGCAGAGGGTACCGAGATGCCTGCACCATCACCGACGTGTGCAACAGCACCGACCTTCCGGAAGTCGAGATCATCAGCCTCCTGGAGGAGCAGCTGCCCCATTACAAGCTAAGAGCCGACACCATCTACGGTTATGACCACGACGACTGGCTTCACACCCCTCTCATTTCTCCAGATGTCAACATTGACCTCACGACCGAGCAGATTGAGGAGACGCTGAAGTACTTCCTTTTATGTGCTGAACGAGTTGGCCAGATGACTAAAACATATAATGACATAGATGCTGTAACTCGGCTTCTTGAGGAGGTGTCACAGCTCCGGCATGAACTGTCCATGAAGGATGAGTTGCTTCAGTTCTACACCAGCGCCGCGGAGGAGAGTGAGCCGGAATCTGTGTGCTCCACCCCGTTGAAGAGGAACGAGTCGTCCTCCTCCGTCCAGAATTACTTCCACCTGGATTCTCTGCAAAAGAAGCTGAAGGACCTTGAAGAAGAGAACGTTGTACTTCGATCCGAGGCCTGCCAGCTAAAGACGGAGACCATCACCTACGAAGAAAAAGAGCAGCAGCTGGTCAACGACTGTGTGAAGGAGCTGAGGGACGCCAACGTACAGATTGCCAGCATCTCTGAGGAACTGGCCAAGAAGACAGAGGATGCTGCTCGCCAGCAGGAAGAGATCACACACCTCCTCTCCCAAATAGTTGATTTGCAGAAGAAGGCGAAAGCTTGTGCAGTGGAAAATGAAGAACTCGTCCAGCACCTGGGGGCTGCCAAGGATGCTCAGCGGCAGCTCACGGCCGAGCTGCGCGAGCTGGAGGACAAGTACGCGGAGTGCATGGAGATGCTCCACGAGGCCCAGGAGGAGCTCAAGAACCTCCGGAACAAGACCATGCCCAACACCACGTCCCGGCGCTACCACTCGCTGGGCCTGTTCCCCATGGACTCCCTGGCGGCGGAGATCGAGGGAACCATGCGCAAGGAGTTGCAGCTGGAAGAGTCGGAGTCGCCAGACATTGCTCACCAGAAACGAGTCTTTGAGACCGTGAGAAACATCAACCAGGTCGTCAAGCAGCGGTCTCTGACCCCGTCCCCCATGAACATCCCTGGCTCCAACCAGTCCTCAGCCATGAACTCCCTCCTGTCCAGCTGCGTCAGCACCCCCCGGTCCAGCTTCTACGGCAGCGACGTCAGCAACGTGGTCCTGGACAACAAGACCAACAGCATCATCCTGGAAACAGAGTCAGCCGAGCTGGGAAACGAGGAGCGGAGTAAGAAGCCTGGCACGCCGGGCACCCCGGGCTCCCACGACCTGGAGACGGCGCTGCGGCGGCTGTCCCTCCGCCGGGAGAACTACCTCTCAGAGAGGAGGTTCTTCGAGGAGGAGCAGGAGCGGAAGCTCAGGGAGCTGGCGGAAAAGGGCGAGCTGCTCAGCGGCTCCCTGACGCCCACCGAGAGCATCATGTCCCTGGGCACACACTCGCGCTTCTCTGAGTTCACCGGTTTCTCCGGCATGTCGTTCAGCAGCCGCTCCTACCTGCCGGAGAAGCTTCAGATCGTCAAGCCGCTGGAAGGTTCTGCCACCCTTCACCACTGGCAGCAGTTGGCCCAGCCTCACCTCGGGGGCATTCTGGACCCCCGGCCTGGTGTGGTTACCAAGGGCTTCAGGACACTGGATGTTGACCTGGACGAAGTGTACTGCCTTAACGACTTTGAAGAAGACGACACAGGTGACCACATTTCCCTCCCAGGCCTAGCTACCTCCACGCCAGTTCAGCACCCAGAGACCTCAGGTGAGAGGTCCCGAGCACGTGTGACTGTCTCAGGCAGCAGAAGTTACCCAAGCCGGCCTCAGGCTTTCCCAGAGGAGATGCAGGAGCCGCCAGCGGCCGAGGAGGAGGAGGAGGAGGGGTCTGGTGAGGGCACCGCCATCAGTCCTGTAAACCTGGCACCTCTACCGGAGGCAGAGTTCCAGGCCATTCTCACTTCCGTTCCGAGCACCATCCGTAGTGGCTCTCTGTCTGTAGCTTCTGCTCGTCTGTGTGGGTGATGATGAAAGCACTCCCATCGTGGGGTTCCGTTTGTTAATAGAGTCTGATGCCTCCTTTTGTAACAAATGGGTGCGGCTCCTCGCCCATCTTGGAGGTGCATGGCCCAGCAGGCTCTTAAAGGGGAGCAGGAAAGGCTGCTAAAAAGAAGTGGATTATTGCCCCGTCATTCCCCCCCAGTCCTGAGCATCAGCTCCCCATTTCTGTTCTGGGTTGCTTCCCACGTCTAAGGGGCAGCTTCTCGAGTCCCCTGATGACCTCCAAACTGAGCTGAGCTGGGCAATTTTAGGGGAAATTTTGAGTGCTGGAATGTTCAAAAGGTTAATGAGAGAATGTGTTACCTGCATGATATATTAAAATTGGAAGAAGCCCAGAAAGTGTTCAGGATTTCAGACAGCACTTCAGAGATCAGCCTGTCCATTTCCTAACTGTAGTGAAGATACGTGTGTTTTCGTTCCAGCTAATACATGTGTTCAAAATGGATTTTTTAAAAGTGCTTTAGCAATTCTCCTTAATCCAGCAAACCCTAAGAGGATGTTAGTAAGCTTTTTTAGAGAGAGAATTCTAGATGAATCTGGAAAAGAGCTGTGCCTGATCTCTGTGTTCTCCCCACCCACTCCCCCACCCCCAGTATTAAAGTTATGACCATGAGTTTGCAGAATTACACATCCTAGGGGTCACTGGGATGCAAAGCTTTGTGCTCGGGGGCCCTGGGATCACAGGATCACATGGGTTACTATTTACCCAGACTTCCTGGACCTCCTCATTGCTTGGGCTGAGGGGGAGAGACCCAGATAAAGAAGAATTAACCCAATGTCATCATTCTAATGACATTTCCAAGTCACCAGGTTTGAGAAGAGCACATTCATCTTTGTGACTGACAATTTTCATTCATGGAAGGTTCAACACTCCACTTATAGTACAGAGCAGGTGAGAGCTGAGGTTCATGGTGGTGTCTCCCATCCCCTGGGTAAGTTCACACACCTGTGGCCAAGGGACTCTTTTTAAAAATTTTTTTTTCCTTTGACATAAACTTTAGGTATCATCAAGTAAAAAAGATTGTTTAACACCTAGGTATATTTTTATCTTTTAGCCATTAAGTTACCAGATTAAGCTTGCAATGGAATGAAAATGTTCATTATTTAGAATCTTCTCACAAAGAGGAAACCAGCTTAGGTATTGTTACCTCCTTTTGTCATCAGCATTGGTGCCCTTCTGGAAAGCAGACAGTGGTGCAGGAGACGCTGTGTCTGCTGATTCTGTGACTGAAGTGGCAGGCATTGTGTCAAGTGTGGTGACCCCTCCCTGCAGCCTGACAGGTGAAACAGAAGTGAATGCTGTGAGTTTAAAGAAGCACCATTAGGTTCATCTTTGAAAAATTGTAGAGAAGGAATAAAGCTTATTAAGTCACCTAAGAATATCCCTCTGAGAGCAGCGAGGGAAAGGGGACCAGGTATGAGGAGCTAAGTCCTGACCACTTTCCTAACCACACACAAAGGCATGTCTGTTGCTTCTTCCCTCCTTCCTCAAACCTGGAACAAATCCATCCCAACACCTCTTGAGAAGAGCACACAAACCGCCAGTGGAAACTGTAGAGGGGTCACATTGGAAGTGTGCGGCCAAAAAGAATGAGATTGCTGAAGGGAATTTAGAGAAGGTCTGATCATCTAGACAAGGGTTCTTCTGAGATTGTTTTCAGAGTAAGGTGTGTCAAAAGTTCTGTGCAGGAGGGAAAGGCTTGGCTAATGATTTGGCTGTTTTTCCCCTGTGGGGAATGATGGGACCATTTTGATTCTTGGAACGTAAGAAGCACATCACTCGGTGTAAATCAGCCCAGGGACCCTGAGTGACATTATGCACATAATCGTGGAGTCATGGGCAGACAGATAAGCTTCCACAGGGAGACCTGGGGCATCCTCTGTCTTGGGATTTGTACTCAGGCTGGCCTGCTCTCTGCCTTGGTCTCCCCTTTCCTGTTGCCAAACAGCACAATTCCAGGAGCTGCCATCTGCCTGGGAAGACTTAGTAGGGAGAACCTTTGAAGACAGAAGGTGGTTAACCTTTCTTTTCTAACAACTGGTATTATGGGAGGAAATTGGGAAAACTTGTATATTAGGCAGTTTTGTCTGGAGCCTGCTTTCTCATGGAGAAAACATTTTGAGTGCTGAAAAATATTTATTAATATATTTTAATGTATTATTGTATCATTATTTGATTTTTATAATCCCATGTCTTTAAAAAGGATGAATCCTTGTTATATTTGTAAATAATTTAGATGATTAAAATGGATTATGGTAAACAACTTTTAGATTATTAGTTTTACTTTATTTCAGTAACATATTTTGTTTTAATTCATAAAGTGTACTTTTATCAGAAATAATCTCATACCGTCAGTGTTTCGAATTTTAGGTATTTATGTGTAGCGAAGAGCCTGCATGTGGTAAAGGTTAAAGATTAGAGTTTAAAATCACATAGTTAGGTCAGCAGATGGTGGTTTGGATGGACAGTCCAATTGAATTACCTGGATGCCTTGATTCTTAAAGGGAAGACAGAGGCAGGATTAAAGCAACATATAAGAAAGTAAAGGTCAGCTTATTTAATACTCATACACATGGAGACCATTTCCAGTGGGAGAAAT EMBV3_13992 TTGAAAGTTTACCACTGCATGTTTTCTGACTACATAACTCATCATATTGCGCCTATGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29801 GAAAAATAACTCTCACCATTGCTTCTTGGCCTGGCACTTTTTTATAGAATGAATGATGGG Gene GeneID:540694|LNX1:NM_001076234:137_cdna Constitutive 0 NULL GeneID:540694 6 GENE LNX1 MGC142859 ligand of numb-protein X 1 EMBV3_08865 GCAGGGAAGTTGGGGATAGTGCAGTGTGGCTTGACATCTCTTGACTATAAAGATTTGGCC Gene GeneID:281160|FGF1:NM_174055:4_cdna UTR3_Alt 2 NULL GeneID:281160 7 GENE FGF1 NULL fibroblast growth factor 1 (acidic) EMBV3_09982 GGCTCCGAATTGGACCACAGTGCTTAATGAACGGCTCCTGGGATTACCACTTCCAAGACA Gene GeneID:511869|TM4SF5:NM_001046102:81_cdna Constitutive 0 NULL GeneID:511869 19 GENE TM4SF5 MGC137292 transmembrane 4 L six family member 5 EMBV3_25062 CAGCACCTGCTATGCAGCAGGAACTCTACACACTATCTCATTTAACCTTCACAGTAACCC Gene BVT0102_203159 + 1 EMBV3_36693 GK000002.2:132584711-132587723 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106908 1 XLOC_062932 NonCoding TCONS_00106908 XLOC_062932 NonCoding NonCoding - 2:132584787-132585984 - TSS78590 1197 2 TCONS_00106908_1 45 0.508771929824561 1 0 0 2.51608322316849e-05 0 0 7.0535862139397e-104 8.96506822073618e-06 0 0 0 0 0 0 0 0 0 0.00167692890310318 0 0 0.000149753389005717 0 4.81794856558552e-05 0 0.000246453425727899 0 0 2.23325143283654e-11 0 1.60488042072464e-05 0 4.52047716635438e-05 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 1e-76 291 90.91 0.173767752715121 0 noncoding 0 0 0 0 -0.0439493974649451 0.718303397459036 -0.0467599059067158 0.551010201555178 ACTGCAGCCTGCCTCCCCTTAGGCTGATCTCTGGGTTTCCTAAGCACCTTCTGCCCTGGCTTCTCCAGAACATGAGCTCCTTGGCCCAGGCAAGTAGCTTGGGGCAGGTACCACAGTAGTTAATACAAAATATGAAGGGGAGGACTGGAGGACTAACAGCACCTGCTATGCAGCAGGAACTCTACACACTATCTCATTTAACCTTCACAGTAACCCTGTGAGGGCTTCCCCGATAGCTCCGTTGGTAAAGAATCTGCCTGCAATGCAGGAGACCCCGGTTTGATTCCTGGGTCAGGAAGACCTGCTGGAGAAGGGATAGGCTACCCACTCCAGTATTCTTGGGCTTCCCTGGTGGCTCAGCTGGTAAAGAATCTGCCTGCAATGCGGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGATTGCACAAAGAACTCTATACACTATCTCATTTAACCTTCACAATAACCCTGTGGGGTTGGTATTATCCCCATTTCACAGATGCTCAGTGTGAAATGAGGCTCAGGACAGCACCAAAGCCTTTTCCCTCAGACTGGGCCCCTCCCACAGAGCAGGCCTGGGATACAATGGGCAAGGGGATGGGTCAGTCTTAGGCAACTGGGATGGCCTGGATTCATTTCTAGCGATGTTAGCACGCACGGTTCCAACACAGCCCCTGAGGGCATCAAGACCTGGGTCTTCTCTGGACCTCAGCCAGATGTGGCCCCTATTTCCCAAAACAAGGAGTCTGCTCTCCTGGGTCACAGATCCTTCAAGAATCTAACACCGGTTCACATTTATATGCTCTCTGCTGAAAAAGCTGCACTTATACTCAAAATTGCAGGGAGTTGCAGAGACCTGGAGTCTGCAGGCTGTTAAGAACCCCTGCTCCAGGCTTCCCTGGTGGCTCAGTGGTTAAGGATTGGACGGCCAATGTAGGGGACACCGGACAGATCCCTGGTCCAGGAAGATGCCACATGCCACAGAGCCACTAAGCCCATGAACCACAACTACTGAAGCCCGTGTGCCCAGAGCCCTGCTCTGCTACAGGAGTCACCACAGTAAGCCTGTGCATCGCAATGAAGAGGAGCCTCCACTCACCCCAACTAGAGAAAGCCCGTGTGCAGGTGCGAAGACCCAGCACAGCCAAAAGTAAACACAAACGTACATACATACACAAAAGAAGCCC TCONS_00104123 TCONS_00104124 TCONS_00104125 TCONS_00104126 TCONS_00104127 TCONS_00104128 TCONS_00104129 TCONS_00104130 TCONS_00104131 TCONS_00104132 TCONS_00104133 TCONS_00104134 TCONS_00104135 TCONS_00104136 r 3' 78 TCONS_00104123 TCONS_00104124 TCONS_00104125 TCONS_00104126 TCONS_00104127 TCONS_00104128 TCONS_00104129 TCONS_00104130 TCONS_00104131 TCONS_00104132 TCONS_00104133 TCONS_00104134 TCONS_00104135 TCONS_00104136 r 3' 1274 EMBV3_01075 ACGTTAAAATCGTGTTGTACAAGTTATATTTTGTTAACTAGTTGTAGTTCATACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_38123 TCATCCAGGCCTCAAAATACTCTTAGGAAGTCCACAAACACCCTACACATAGGGGCTGGG Gene BVT0102_078485 + 1 EMBV3_21601 GK000005.2:32407691-32450297 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194621 TCONS_00191537 TCONS_00194622 TCONS_00191534 TCONS_00191525 TCONS_00191538 TCONS_00191536 TCONS_00191533 TCONS_00191539 TCONS_00191530 TCONS_00191526 TCONS_00191531 TCONS_00191527 TCONS_00191540 TCONS_00191532 TCONS_00191528 2 XLOC_117808 XLOC_116948 Coding TCONS_00191528 XLOC_116948 Coding Coding SENP1 5:32357472-32412543 j TSS143505 7098 1 TCONS_00191528_6 503 0.0266272189349112 19 0.871454512438714 0.000999986010424937 0.000115424120088219 0.000153114307593468 4.83588504006997e-05 9.40975555525032e-05 1.31813402657589e-05 1.26458934230794e-10 0.000381477563027767 6.00397803326825e-05 2.07320370483148e-05 1.71125297700642e-05 3.25064652325635e-14 4.65489632100112e-05 9.01319335761347e-08 7.8790575203996e-05 1.11608913858908e-17 3.86284890050501e-33 1.81152554243553e-10 6.24085992809268e-12 0.000742910295513929 3.07869113999112e-05 3.76203510184877e-29 2.20969835704554e-14 3.13618612652895e-17 6.74715816042289e-05 0.000383278527339419 3.14110304644615e-17 7.11409013152011e-05 1.30702348972291e-10 5.25521150107586e-05 NM_001206876.1 SENP1 Bos taurus SUMO1/sentrin specific peptidase 1 (SENP1), mRNA. 0.0 3112 100.00 0.242885319808397 NR_051991.1 SENP1 Homo sapiens SUMO1/sentrin specific peptidase 1 (SENP1), transcript 0.0 5530 86.85 0.63454494223725 TCONS_00191528_6 sp|Q9P0U3|SENP1_HUMAN SENP1_HUMAN Sentrin-specific protease 1; 0.0 920 93.04 0.998011928429423 1 coding 1 1 1 1 -0.0017772535019748 0.987704579971358 0.00371862054502953 0.94029072751531 CCCCCCCTCCTCCGCAGCCTCGGAACAGCTCTTCCGGTGTTGTGGAGGCGGTTCCGGTTCGCGGCGGTTCCCGGGTTTTGCGTTCCGCGCCCGGCCGGAAACCCCTTCGCATAGCAGCCGGTTCCGGTTCGGGCTTTGTATCTTTGCTGAAGTCAGTGATGTGAAAACACCTGACATGGATGATATTGCTGATAGGATGAGGATGGATGCTGGAGAAGTAACCTTAGTGAACCACAACTCCATATTCAAAACCCCATCTCCTGTCACAAACAGGTTTTTCAGAGGACCAGCTTTCACTTTCTGACCATCAGATTTTACCTTCCAGGCGAGGAAATTTGGACCGGTCTTACACTTGTTCTACAAGAAGTGCAGCTTATAGTCCAAACTATTTTTCAGGCCCAGGCCTGGGAGTGCTTGCAAGATATAGTTGGGGTAAAATGTTGACTTTTGGTGGACACCACGGAGTCACATTGATGCAGATAAGGCACATGGCTGTGGCAGGATTCAGCTCCTTCATCAATTTTCAGACAACACTTCCTCAGACAGTTTTATTGGCTCAGGAGACCTAAGAACCTTTGGCCAGAGTGCAAATGGCCAGTGGAGAAATTCCACTCCGGTATCAGGTTCAACTTTACAAAAATCAAGAAACAGCCGAAGTCTTTACCTCGAAACCCGAAAGACCTCAAGTGGATTATCAAACAATTTTACAGGAAAGTCAAACCATCACTGCCACATGTCTGCATATGAAAAATCTTTTCCTATTAAGCCTGTTTCAAGTCCATCTTGGAGTGGTGCATGTCGTCGAAATCTTTTGAGCCCCAAGAAAACTCAGAGACGACATATTAGCACAGCAGAAGAGACAGTTCAAGAGGAAGAACGAGAGATTTACAGACAGCTGCTACAGATAGTCACAGGGAAGCAGTTCTCTATAGCCAAACCCACCACACATTTTCCTTTACACCTGTCTCGATGTCTTAGTTCCAGTAAGAATACTTTGAAAGACCCACTGTTTAAAAATGGAAACTCTTGTGCAACTCAGATCATTGGCTCTGATACTTCTTCATCTGGATCTGCCAGCATTTTAACTGCCCAGGAACAGTTGTCCCACAGTGTGTTTTCCTTACCATCTTACACCCCAGATGCTGGTACATTTGGATCCAAAGATTCTGATCCTGTCCATCAACCCGAACATGACCACTCTCTTTCATATCAGGCAGATAACTTACCAGCTTCAAATACAGAATCTGAAGGATCAGACTCTGTGATTTTACTCAAAGTGAAAGACTCCCAGATTCCAACTCCCAGTCCTACTTTTTTCCAGGCAGAGCTGTGGATCAAAGAATTAACTAGTGTTTATGATTCTCGAGCAAGGGAAAGATTGCGCCAGATTGAAGAGCAGAAAGCACTGGCATTACAGCTTCAAAACCAGAGACTGCAGGAACAGGAACATTCAGTACATGATTCAGTAGAACTGCATCTTCGTGTGCCTCTTGAAAAGGAGATCCCGGTCACGATCGCCCAAGAAACAGGGAAAAAAGGTCATAAATTGACTGACAGCGAAGATGAATTTCCTGAAATTACAGAGGAAATGGAGAAAGAAATAAAGAATGTATTTCGTAATGGGAACCAGGATGAAGTTTTGAGTGAAGCATTCCGCTTGACCATTACACGCAAAGATATTCAAACTCTAAATCACCTTAACTGGCTCAACGATGAGATCATCAATTTCTACATGAATATGCTGATGGAGCGAAGTAAAGAGAAGGGATTGCCAAGTGTACATGCATTTAATACCTTTTTTTTCACTAAGTTAAAAACGGCTGGTTATCAAGCAGTGAAACGTTGGACAAAGAAAGTGGATGTCTTTTCTGTTGACATTCTTTTGGTGCCTATTCACCTAGGAGTGCACTGGTGTCTTGCTGTTGTGGACTTTAGAAAGAAGAATATTACCTATTACGACTCTATGGGTGGGATAAACAATGAAGCCTGCAGAATCCTCATGCAATATCTGAAGCAAGAAAGCATTGACAAGAAAAGAAAAGAGTTTGACGCCAATGGCTGGCAGCTCTTCAGCAAGAAAAGCCAGGAAATTCCACAGCAGATGAATGGAAGCGACTGTGGCATGTTTGCCTGCAAATATGCTGACTGTATTACCAAAGACAGACCAATCAACTTCACACAGCAACACATGCCCTACTTCCGGAAGCGGATGGTCTGGGAAATCCTCCACCGAAAGCTCTTGTGAAGACCATCTCAGTTAGCAGACATGGACTTGTTGGGGACCAGCTCTTTGTTGTCTACAGCCAGAGACCTTGGAGACAGCTGCTCCCAACCCTCTCTTCTTGTAAAGTCCTTGATCCTGGACCAGGCCCTGGAGAGATGCACTCACAAGCACATCTGCCTTTCCTTTTGTATCTCAGATACTATTTTTGCAAAGAAACTTTGGTGCTGTGAAAGGGGTGAGGGACATCCCTAATCTGAAGAGAGAGACTGCTTTTTACTTCTTCAGTTCTGCCATCTTGTTTTCAAAGGGCTCCAGCCTCACTCAGTCTCTTAATTAGGGGCCTGAGAGAAGCTTGGAAGGACTCTTGGTTTCGTATAAACTCTTGTTGTTAGGCCTTACTAAGAGGTAGGAATGGATGTGGGTAAAAACGTAGGGATGAAAACCACCAGCATATACACGCACACGTACATACACACAGGATTTTCAAAATGTGTCACCAGGATAGTAGACTGTAAACTGGACTTTGGGGCACCTGCATAAGGCTGTCCTCCAGGACTTGTCCTTTTTACATGCCCCTTGTGAAGTCCATCTGCTTCTGTACAAGGCTGTTTTATCTGTAGCTTCTTCCCCTCCTGAGGCACCACATGTGAGCCCTGGGTGGACCCCAAAGTCCCAGGCAGTCCTTTCCTTAAAAGCAGTGGTTTGCATGTGCTCACAACACATGATATGGGGAAGACCCACCCAGGGAGTGGTTTAGTGGAGTAACAAAGGCGCCACTTTTACTGCTACCTACTTCTGACCAAGAAGAAGAAGGACCTCAGTCTTTAGCATAAAATTCCAGCTTTGGATGAATGCAGGTCTAGTTTGGTCTGTGGCTAGCTAGTTTAAATATGTTTCTAACCACAGAGAATTTAATATATATATATATTTCACAGGGATATGCTTTTTTTTTTTTTTTTTTAAGGCTGAATGTGTTCACCATTTTAGCCTGTAGATTTATTACCATTTTCCAAATTTAGCTCCAGCATACACAGATCCCAGCCCCTATGTGTAGGGTGTTTGTGGACTTCCTAAGAGTATTTTGAGGCCTGGATGAATTTTGGCTTGGGGTAGAGGTTACAGAGGAAGGCAAGATTTTCAAATGGAAAACGGGTGGAATTTGGACTGATCAACTTGAGATTGAAAAACTGCTATTCTTTTTGTTCCTTGTAGCATCTCCCCCACCTTTTGAGCGCTCCTCAGGCTAGATAGTGAAATGATCCAATGCCAGTGTCATTTTGTACCTAAGTTCCAAAATAGGAACATTTTATACTTTTTTCTGTATTGTAATAGGTAGTTTTGTATGAGATCTTTTCTTCTCTTCCCTTGTACCTCATCCTTTCCAACATTGTGCTTTCTCCCTGGGCTTATTTGAAAATTTTACTCTGTTTTATATCAAGCTTGTTTAGTACATTTTTCTATGTGTTACCACAGGTTACAATTTGAAAAGAAAACTATTTTTTTTAAATATTCCATTGTTAACTGAATGTTACTCTTTCCACTCCAGCAACTAGATGTCCTACCTTTTTCATACTGCCTGCCTTTGAGGGGAAGACCACCTTTTGTTTGTTTTCTTTTTTTTTCTTTCTTCATTTTTTTTTCCTCCCTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGGTGTTTTCTGTAGGTAATAAATAGCTTTCTACATATAAGTTGCTGGGACTTTTCACATTCTCTCAGAAAGCTATGGCATGCAGGCTCATTGTGGGACTCCTGTACATTGATTCTTGGTACTTAATGTATTGAAGTGACAACTTGAAAGGTGGCAATATGGTATAGATTTTGGACCATGAATCAAAAGACCTGAGTTTTTCAGGCACATTTGCTATTGTCTGGGGAACTCAGAACAAGATAGTTCTCTGTATTTATTGTTTGTCCATTTAGATAACATCTGTCTTACCTTCTCACAGACTTTTTGTACAGACCAAAGCAACAAATATTTATTGCCATGTATAGCAGAAAATGAAACATGCAACAAAAGCACTTTGAAAAATATATAAGGAATTGTTAAGCCTGTCTGAATTTGGCCCCGCTTTCTGACCAATATAGTTTTATACAAGGTGAAGTTAGTGATCCTGAGACCACCCCATGAGTGGGCCAGGCTGAGACACAGACTGGGTCCAGAGTGGGAACCAGTAGTGGGGGCCATTCTTTCCAGAGAGCTGCCCAAGAAGAGCAGAACTAGCATCTGGAAACTTTCTTCTTCGTTTTAAGGGTGGGCCTTGATGACTGGGGTGGGAGGGTGGAGGAATGTGATGTTCCTGCCTTCCATGGCCAAGGGCATGTTATCAGCATCTTGTTTAACCTGCTTTAAACTAAAGCCTATGACTTTCCTTTTCTCCAGTCTTCCCCTCTCTCCTGTGCCCAGTGCTCATAATTACCTTGTTGTTTGTCATTATTCCCTTGCTGAGTCATGTTCAACTGTGCAACCCCATGGACTGCACAGGCTCCTCTGTCCAGCGGATTTCCCAGGCAAGAATACTGGAGTGGGTTGCCAATTTCCTCCTCCAGGGGATCTTCCCACCCAGGGATTGAACCTGTGTCTTCTGCATTGGCGGGCAGGTTCTTTACCACTGAGCCACCAGGGAAGCCCCATAATTACCTACCTCCTCTAAAAAAAGGAACAGTGATGGATGACAAGCTCTAGATGCCAGATACATAACCTTCAGTAGAAACAGTCTCACCGATCACTCCTGGACCCTTTATGGAGAAAGACCATTCCTGCGCATTTGAGAATGAATACATGGTTCAAGACTAGTTCCATCCCATTTGTCACTGGGCCCCCTGAGACCCACTGTTGCTTCCTGGAGCCCTGTTTAGGGTTGAATGCAAGAGTACTTTGTCATCTGACCTGGCAGCTGTGAAAATTAACTCCTCTGTATATATGAGGTGCTTCATCCTTCTCTGTGGTGTCAACTTCTTTCTTGTTTAGCCCCTGTAATTGCCGTAGCATCTTCTACCCACTACCTCTAATAATATTAGCCCCAAAGTTCTGGGATAGAAACAGGAAACCTGGAAAAGCACTGCCAGCAACTATATTACATAGTCTGTCCATCAGCACCTGGTTTTATGTGGCCCATGAAAGGCTCCAGTGGGTAGTCAAGAGTGTTCACTTCAGAGCCCCAGTGTTTGTAATGTTTCAGCCTCTGGTCCTTCTCCCATGCCATCCCTCCAGCTCTTGAATGTCTTGACCCGGAGTAAGAGACAGCTGATACTTGGGCTTTGTCTTCTCCCTTGTTCCACCTGGATGGGCTAAGGTAGTGGGGGAGGAGAGGGTGGAATATGATGCTTTCATCCTGGGGGCTCACATACCCAAGAGCATCAAAAAAGGATGTGTAAGACTACTGGGCCCTGTTGACAGACTACTGCTGAGCTGGCCAAGTGGCCATATTTCTCTGCCCAGGAAAAATCTCCATAGCTTCAAATTCATCCTAACATTTGGGAAGGGATGAGTAGGGCTCAGCCCAGTATCTTTCCTAACAGCCCAGGCCAATTTTGCCTTGCTGAATTCTAACAGTAGTCTTTTAAGAGCCCATAATTCCTATACCCAGCTGTGGAGGCAGGGAGAGATGTAACATGAGGTGAGTTGGGTCATGCTGGTCAACACTAAGAGAAGGGAGTGCTTAGACATCCATGTGAGAGAGAAATGTGAAACTAAGGGACTTTGAGCTGGAGGATAAGCCTTGAAATGTTTGTGCAGGCTGCTGCTCTGGCCTGTCATAGGTGGGGTAATTCCAACTGGGAGCGGTCGGACCGGATGTCCAGGGTCTTGTCAAGGTCTAAGATTCTTAAATGATATTGAGGCCCATAATGCCAAAGTCAAATTTAAGGCCAGTATTAGCACTGGCTTAATCTTAGAGGTAAGGCCCAGGTCAGTCCTCCCTAATGGGACAGTTTGTAGCTGCTGACTTTTCTCCATTCTAAACTGAGGGGTAACCATCAACCGCTTGACTTCTGGAGAGTCCGGTTCCATCCTCAGAACTTTGGTGCTGGGAAAGGAAAGCGTGTGGTGAGAGGTGCACAGGGAGTCCAGAGCACCCCTTACGAGTTTATACTCACTGTTTCCACACACTCAAAGCGCACACACCCAAAGCCTGCCTCCTTGAAACCTTCCCTGATCACTTTATCTTAAAATCTCTTACCTGGACAGCCACAGCCCTTAGAATCAGCAAACAGTAAAACTCCATGTGGCATGTGTATTGTAATCTGTCCTTTACATCAAATGGCCTGAGAATGTGTAACTGTTGAAGGCAGGTGAATAATTTGATGCTTTTCCTTCAAGCCAGGAGTTCCAGTTGCTTCTCTGGCCTGCTAGGGAGGAGTAGGGGCAACTGACTAAACATTTACTTAGACAACATTGCAGAGTCAGGGAAGAAGGTCCATTCACAGAAGCCTGCAGTGAGGCTGTACCTCTTCTGTGCCCCAAACCTAATGCCTCACTCCACACTTAACAAAACCCACTTCCTCAGCAGTTCAGCATGTCCTTCAGGGTCTCAGTCTCTGCCAGGAAGCTAATCAAGTATTTTTTCCCTAACCACACATCTTTCTATTATATACAGTTTTTCCATCTTTTTATTTCCAGTACATCCATCGTGGACTGTGGATCCCCTCCTGTTAGCCTTGTCCCTTAAATGGACTGTTTCCCATGCTGCCTGTGTCTTGTCTGTTGGCCGGAGCTAAGTTCCTGGAGGGCATCTGCCTCATCCACTTCTGGGGAGCCCCTTATGCTAGGTGTTTAAATAGGCCGGTGTTTAAAGCACTAGGCTTGGGGGGCCCTGAAGCGTGGAGTAAAGAGATGGTTTGACCAA EMBV3_33293 AACGTGAAAAAGAGTATCTGTAATTCTTCCCCACCAAACAAGCCTGCAGAGACTGCTCGG Gene GeneID:518992|PTPN22:XM_002686175:342_cdna Constitutive 0 NULL GeneID:518992 3 GENE PTPN22 NULL protein tyrosine phosphatase, non-receptor type 22 (lymphoid) EMBV3_08997 AGCCTTCGCCATGCACTTTACGTTGAGACTACTGGTTCTCGTCCACCCCAACTCCTCTTT Gene GeneID:100337329|LOC100337329:XR_083717:219_cdna Constitutive 0 NULL GeneID:100337329 7 PSEUDO LOC100337329 NULL serine/threonine protein kinase 11-like EMBV3_08777 GGCTCTGCTACAAGCAGCTCAAGAGCATCAGCAACCTCGTCAAGAGCAAGTCGGGTTTGA Gene GeneID:508813|KATNB1:NM_001101909:153_cdna Constitutive 1 NULL GeneID:508813 18 GENE KATNB1 MGC165864 katanin p80 (WD repeat containing) subunit B 1 EMBV3_26518 CTTCTCACCCCACAGGCTTCATCACCATGACACCCCAGCTCTTCATCAACTACAAGCTCA Gene GeneID:618037|CLPTM1:NM_001046613:433_cdna Constitutive 0 NULL GeneID:618037 18 GENE CLPTM1 MGC134406 cleft lip and palate associated transmembrane protein 1 EMBV3_29151 TTCGGCCCTGTCCGGAAGCCTCTATGGTGGAAGCGGTGGTGTTTTTAACGTGAATGTTCA Gene GeneID:526937|DCXR:NM_001075891:108_cdna Constitutive 2 NULL GeneID:526937 19 GENE DCXR NULL dicarbonyl/L-xylulose reductase EMBV3_30655 GGTAGCTCCCGAATCTACTACTGGAACATGGACTACTGTATCGACCGATGCACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_13111 TAGTTCTTTTATCCTCAGATGACAGTAGCAAGTTGTCTGCCAGCATTCAAGATTCTGGCC Gene GeneID:507989|APLF:NM_001077874:32_cdna UTR3_Alt 2 NULL GeneID:507989 11 GENE APLF MGC152013 aprataxin and PNKP like factor EMBV3_26811 AATGACCTGAACGACAGGGACAAGATGAACAGGACCGTAGAAGACAGCTTTGAAACTGCC Gene GeneID:100300061|LOC100300061:XM_002699002:60_cdna Constitutive 0 NULL GeneID:100300061 29 GENE LOC100300061 NULL similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 EMBV3_33368 CTCCATTTAAAAGCCAATAGCGAAGTGTGCAATTCTAAGTCTAAGGCGCTACCGCAGTGC Gene BVV0102_104823 + 0 NULL GK000030.2:31023048-31594774 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14031 TACTCTAGGAGGTGGATCAGAAAAGGTCTTGCTGCAATTTATGTCAGGAAGTGTTCTGCC Gene BVT0102_339112 + 1 EMBV3_05842 GK000007.2:83110765-83210509 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43763 GTCAAATGCAGTGGTGTTTGGGGGATGAAGGTGTGGTACGTTTGCCAGCTCTTTGGGACA Gene BVT0102_114203 + 0 NULL GK000019.2:35107938-35112522 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04033 TTACCAGTCGGCAAAAGGAGGCCTGGACTAGGCAGGACAGAGAGGCTCGGTGTCAGCTTT Gene GeneID:100196899|LOC100196899:NM_001143747:5_cdna Constitutive 0 NULL GeneID:100196899 25 GENE LOC100196899 NULL hypothetical LOC100196899 EMBV3_22637 GTGCTGGCTTCTAGTTTTTAGAGAGTTGGTGTCAAAATGCGTGTCCCATGAAGAGGAAGG Gene BVT0102_146760 + 1 EMBV3_02940 GK000030.2:2198129-2327856 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42666 GTTCCTGCTAGGACTTCGAGTTGTGACCTGTGATACATCAGTGCTTATTGCACCGAGTCG Gene GeneID:511911|FAM8A1:NM_001081718:77_cdna Constitutive 0 NULL GeneID:511911 23 GENE FAM8A1 MGC148752 family with sequence similarity 8, member A1 EMBV3_00677 AGCAGCTTTTTATTGGGACTTTTTTGGTGTGTGGGTACAAAGGCAGTTACAGAGACCATG Gene GeneID:615552|MGST2:NM_001076382:59_cdna Constitutive 1 NULL GeneID:615552 17 GENE MGST2 NULL microsomal glutathione S-transferase 2 EMBV3_05828 ATTCGTTGCCTGCTGCCCTTGAAGTTGCACTCTCTAACACTCGTAGGAAAGGCATCCCCA Gene GeneID:618517|GBGT1:NM_001076509:220_cdna Constitutive 0 NULL GeneID:618517 11 GENE GBGT1 MGC140602 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 EMBV3_38414 TCTACTGCAGAACCGCGTGGTGCGGAGGTCACTGGCGCTGCTGAAGAGTCTGTACTGGTG Gene GeneID:617180|WBSCR28:NM_001076446:311_cdna Constitutive 0 NULL GeneID:617180 25 GENE WBSCR28 MGC134458 Williams-Beuren syndrome chromosome region 28 EMBV3_38863 CCACTGCGGCCAGAGCGGAGAACACATTTGCTCGACAAGCCTCAACCTGTTAGTCTGCTT Gene BVT0102_120211 + 0 NULL GK000029.2:48691554-48876826 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18828 CCCCCAGCGCGCCCAGCTTCTGCGGATCAGGAGTCAGAAGGCTGCACCTTCGCTTCCTCC Variant GeneID:281780|GGTA1:NM_177511:24_cdna 251^345 6 EMBV3_01853 GeneID:281780 11 GENE GGTA1 NULL alpha-galactosyltransferase 1 (glycoprotein) EMBV3_39661 GGGGCAGCAAAGCTGGGACAAGGGCATGGTAGCCAAATGCCACATCTTGCCATAGTTTAT Gene GeneID:508292|IL34:NM_001100324:82_cdna Constitutive 0 NULL GeneID:508292 18 GENE IL34 C18H16ORF77 IL-34 interleukin 34 EMBV3_02362 CAGCGAGAGAATTTACAGAAAGCCATGGAACTGGTGACAATCAACTACTCCTCTGACCTG Gene GeneID:519743|PAN3:NM_001077940:124_cdna Constitutive 0 NULL GeneID:519743 12 GENE PAN3 MGC152005 PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) EMBV3_17384 GGGATATGTATGGGTAGGTAAGTCAGTAAGAGGTGTTATTTGGAACCTTGTTTTGGACAG Gene GeneID:539003|CTNNB1:NM_001076141:178_cdna Constitutive 0 NULL GeneID:539003 22 GENE CTNNB1 MGC139922 catenin (cadherin-associated protein), beta 1, 88kDa EMBV3_30540 AAAAAGAATTTACCTTATATTTGCAGGTGAAGATTTTTCTATTGAGATTATTATATACAA Gene GeneID:525962|GNB4:NM_001099033:14_cdna Constitutive 2 NULL GeneID:525962 1 GENE GNB4 MGC152413 guanine nucleotide binding protein (G protein), beta polypeptide 4 EMBV3_01392 ATCTCAGGGCCAAGGCCCAGGGTGCTAATTTGCGGTTTAGCATCAGTTTTCTCCATTCCT Gene GeneID:510934|C18H16orf57:NM_001075477:192_cdna Constitutive 1 NULL GeneID:510934 18 GENE C18H16orf57 C16orf57 MGC152256 chromosome 16 open reading frame 57 ortholog EMBV3_04407 AGGGACACTAACCCTCTGCACAGTTGAAAATCCACATATAACTTTGTAGGGACTCCTTGG Gene GeneID:786254|LOC786254:NM_001130763:760_cdna Constitutive 0 NULL GeneID:786254 4 GENE LOC786254 NULL hypothetical protein LOC786254 EMBV3_00410 ACCCAGTGGGATCCCTTTAGAAATAATGTTGGTGTTTAACTTTGTCTCCTGTTTTGGATC Gene BVT0102_163927 + 0 NULL GK000005.2:24224563-24226911 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194150 TCONS_00191074 TCONS_00191076 TCONS_00194153 TCONS_00191075 TCONS_00194151 2 XLOC_117684 XLOC_116804 Coding TCONS_00194150 XLOC_117684 Coding Coding CCDC41 5:24223042-24374919 j TSS144947 6362 2 TCONS_00194150_4 329 0.0567431625275071 15 0.958209328662857 0.00100424225542203 8.7405372360633e-06 9.09002409565348e-05 0.000223881124004425 1.25846970456712e-07 1.33807128073872e-06 9.1636761097178e-05 0.000605771540057601 0.000782136841477859 3.92358497297724e-05 6.51627245014014e-27 5.36237919889259e-05 0.000204050186802928 1.20921102464554e-07 0.000293694544985043 1.19416637610252e-06 4.80238189612516e-08 0.00144279334652123 0.000292968508449461 1.96598575230668e-08 0.000325406929897412 0.00144810568239033 0.000817719605485269 0.000480022536568078 0.000709682860108937 0.0010396762685738 0.000909114412813768 0.000121723482789461 5.56125437540334e-07 0.00014257830950184 XM_005206113.1 PLXNC1 PREDICTED: Bos taurus plexin C1 (PLXNC1), transcript variant X1, 0.0 4399 100.00 0.383212826155297 NR_037687.1 PLXNC1 Homo sapiens plexin C1 (PLXNC1), transcript variant 2, non-coding 0.0 2764 85.16 0.383055642879598 TCONS_00194150_7 sp|Q9Y592|CEP83_HUMAN CCD41_HUMAN Coiled-coil domain-containing protein 41; 0.0 524 91.07 0.996563573883162 0 coding 0 0 0 0 -0.985944606863512 0.00996356507763215 0.00836118447589679 0.860092107288164 CGCTCCGTGGGGTTTGCGGGGCGGCGGGCCCGGGGTGCCTTCCTGGCCCGACTTCGGCGCCGGCCCCGCACCCCTGAGAACGCCGGTCCGCCGAGGAGGAGCGGGGCTTTTTTCCATCGCCGCCCTCTCTGCCTTTGGAGCTCTCCCGGGGTACCCCACATTTCCCTAGGGTTGGGAGCCCGAGGGGCGCGCTCGGCTGTCCGGCTCCTGCTCTTCAGCCTGTGCCACGAGCGGCAGCCGAGACCTCGTCAGACTTGACGGGCTGGGCGGGCAACCCGCGTGCGGGACCGCCTCCCGTAGCCCCAATGCCCCGGCGGGAAGAGAGCCGTGAGAGTGTCCGCCTGGCGAGTGCGGCCAGAACACGGTCACTGTTGGCTGTGTTGCAAGGACCGTGTGTGAGTCTGGTATAATTTGACCTCCTGAGATTCTGTCTTAGCAAGAAGAAAGTGGAAAATACTCTTGGAAAGAAAACTAAGACATTAAGAAAGCCAGAACTTATTTTTACATGGTTGTCCACTCAGTTACCAATATGGATGCTTTTCCCACCATTTTTCCTCCTGGTGGAGACAGTGAACTGAGACATTCTCAATCTGAGCTCCAAAAAATGTTAATTGATGAACGATTAAGATGTGAACATCATAAAACCAATTATCAGACTCTGAAAGCTGAACACACAAGGTTGCAGGATGAGTACATAAAGTCACAAAATGAACTCAAGCGCGTTTTAAATGAAAAGCAAACTCACCAGGAAAAGTTTCAGCTGCTGCTTGAAGAGGTACGAGGAGAATTAGTAGAGAAAACTAAAGACTTAGAAGAGATGAAGCTGCAGGTATTAACTCCACAAAAGTTGGAATTGTTACGAGCCCAAATACAACAAGAGCTGGAAACTCCAATGAGAGAACGTTTTAAGAATCTAGATGAAGAAGTGGAAAAGTATAGAGCTGAATATAATAAGCTTCGCTATGAACATACATTTCTCAAATCAGAATTTGAACACCAGAAAGAAGAATTTGCACGTATTTTAGAAGAAGAAAAAATAAAACACAAATCAGAGATTGCAAGATTGGAGGAAGATAAAGAACTCCTTAACCAATTGCACAGTGTTGATCCCACAAGAGAGAGCAACCGAATGGAGCAACTTGTTCGAGCAAAAGCCCATTTGCATCAGAAATTAAAAAGTTTAGAAGCTGAAATAGCAGAATTAAGAGCTGAAAAAGAGAATTCTAGTGCTCAGGCAGAAAATGTCCAAAGAATTCAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAGTCAGCTAAACTACAGGCTGAACGCTTGGAAAAAGAGCTACAATCAAGCAATGAACAAAACACTGCGTTAACTAGTAAATTGCATAAAGCCGAACGGGAAGTAAATACATTGGCCAGTAAAGATTACAGTCAGACAATGAAATTCTCAAATCAGCTGTTGAACACCACAAGGCGCTCTTAGTAGAAAAGGACCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTTTGGAATTACAAGATGAAAAGCTAGAACTTGAGAGCAGATTAGCGGATTTAGAGAAAATGAAAGTGGAACATGATGTCTGCAGGCAGTCTGAAAAGGATCAGTGTGAAGAGAAATTGCGAGCTTCACAGATGGCAGAAGAGTCGGCCAGAAGGGAACTACAGAGTATTAGGTTAAAACTTCAACAGCAAATTGTGGATATTGAAAATGCAGAAAAAGAAAAAAAAGAAAATTCTGACCTGAAACAGCAAATCAGTGGTTTGCAGATCCAAGTGACCTCACTGGCACAGTCAGAAAATGAGTTGCTGAATTCAAACCAAATACTGAAGGAAATGGTGGAGAGGTTAAAACAGGAATGCCGAAATTTAAGAAGCCAAGCTGAAAAAGCACAACTAGAAGTTGAAAAGGCATTGGAAGAGAAGCAAATACAATGGTTGGAAGAAAAACATAAGCTTCATGAACGTATCACTGACAGAGAAGAAAAGTATAATCAAGCTAAGGAGAAATTGCAGCGAGCTGCAATTGCCCAAAAAAAGAGAAAATCTCTTCATGAAAACAAATTAAAGAGACTGCAGGAAAAGGTAGAAATCTTAGAGGCAAAGAGAGAAGAATTGGAAACAGAAAATCAGGTGTTAAATAGACAAAATGTTCCATTTGAAGAGTATACAAGGCTTCAAAAAAGACTAAAGGATATACAGAGAAGACATAATGAATTTCGAAGTTTAATTTTGGTTCCTAATATACCTCCATCAGCATCCATCAATCCTGTTAGTCTTCAGTCATCAACTGTGATTCCAGGCATGGAACTGTCCTTCCCTCCTCACATGCAGGAGGAACAGCATCAAAGGGAACTCTCTCTACTTCGCAAAAGACTAGAAGAACTTGAAACAACACAAAGGAAACAACTAGAGGAACTTGGATCTCCTGGGGAATGATTTGCTTGGAGAAAAGGCAGATCAAAAGGGATGAAATCAGTGACTCAGTAAAGCTTGAAGCTTTAATGTATGTGGCATTTAGATACTTTATTACTGTTTGCCAAATCACTTGACTGTGCCTCAAGAAAAGGTACTATCTCCATGCTGTGTTGCATGAATGTCAGGATTTTAAGGTTGTAGTAATGATAAGTGAAGCCCTAAGACAGCTTCAGAGATATTTAGAATATTATTGACAACCCTTTGAGAATGTAAAATAAATGAACAAAGAAGAAGGAACTAAATAGGGAATCAAGTTTTTCAATTATTAATTTTGCTTTGTTGAGTTTTTTTAAGGGGGGGTGTGTGGCATTTTGCCTAAATAGAACTATGTTGAATTCCCTCCTCTTCCTCTTTGAGGTGCTTACCAATCACATGGTCAGAAATGTTTTCTGGTTTACTATATGTGAAAGTTATTTAAAGTCAGCATAAAACTTAAGATATCTATATATATTACTCAGTTCAGTTCAGTCGCTCAGTCATGTCCAACTCTTTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAAACTCACGTCCATCAAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTTTCCTCCTGCCCCTAATCCCTCCCGGCATCAGAGTCTTTTCCAATGAGTCAGCTCTTCACATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAACACTACCTTTTCTAAGAGTTGTGTGCACATAATTTATTAAAAGCTTAATAAATATTTTTATATTATTTTGTATTTAATTTTGTTTTAACCATACAGTGTAGAAGATCTCCCTAATTTTGGCTTCGTTGAGTTAGAGTTAATAGAAGATAACAAAGTACAAATAATTAAATCCTGTGGCTATATAATAAAACAAGGGCCATTTATTGTAAAACTTGAACCCAGTGGGATCCCTTTAGAAATAATGTTGGTGTTTAACTTTGTCTCCTGTTTTGGATCTAACCAAATTGTTATAAATGTTTTATTTCTCTGTGTCCCTAAGTATGCCATCATTTGCTTTTTTATGTAACATCTTTTAAAGGCATTCTGCTGGAATAACTTCATGTCAATAAGGCAAAGCTAAAAAGTCTGCTGGACCAAGTAGAATGTTCATTATCTAGACGTCATCACATTCAAAATTCCAAGACGACAGTGGAGGCCAGGAGTAAGATTGCATAGCCTTAACATCATTTAGAAGAAACTAGATTTACTTACTATATAATACAGCTGCTAATTTACAAAGCATATACAGTGACACTTTGTTCTTGAGAAATAATTTCCGTGGAGCCACTCAGAATGAAAAAAATCTATTGAAAATTTGAAGGAAGAAAAAGACAAAAACAGTCCATATTTACATCAAAATGTTTATTTTTGGATATAGACATTTAAAACATTCATCTCCAAGAACTGCTTCAATCAGGTATACAATAAGAAATAGACTTTAAATCCCTAATACAGAAAAAAGTAACAGAATTAGTTTTTAAATGCTGCTGTAGACACTAGTGTTAGAAAAAAGAAAAGTTTATAAATGGTTTTGCACCAAAAAAATATGCAAAGAAACTTGAAAATAGAAATTGTTTGCCATTTGTTTCTCTGGCTGCTGTTTAATATAGACCCAGTGACTGATTGTCTCCAGCACACATCTAATTTGGCCATGTACTGCGTTTGGCTAACGTGATCCAAAATGTGATCTAGACAGTGCTTTTCACTGGAGGATTGACAGACACGCTACACACATTAGTGACTCTTCACCACCTCAGTGAGGTAGGCTAGAAATATTATACAGAAATTGAGGCACAAAGAGGGAAGTGACTTGCCCAAAGTCCCCAGCAGCACAGTCCCTGGAAAAGGAGGGAAGTCTCCACACAGGATTCATGTGCCAGAGAGCCGGACAGGGACACCCTCATGTAGCATTTACTAAATACTGAGATAAAGCTGTAGCTGATCCTTCGAGATTTCTTAGCATTTCTGTACCCTAAAGAGGGGAAGTCTTTTGGGCAACTCTCCTACCCTTGGGTCTCAACTCTCCTGCTGTTCTCCTATGAATGCCTTCACATCAAGACTGCAGCAGCCTTAGATGGGGACGAGACCTTTCTTATAAAGAACCTCTGTGGTAGGATTTTTGAGGTGTGTCCATTGGAAAGACAGTGGCCAGAAGTGACAGGATTGGGAAGGTCCCTATAGAGCAATAAATGCTTATCTTCTCTGATCAGTTTGTTGAGGTGTCATCGCTCACTCTTTACCAGATAGTGAGAAGCAAAAAGAACTGCATTCATTTAAGACAAATGTACTTTTAAATCCTGCTATCTCATAGATTGTTGTTGGGAAGTGATTTTAAGGAATGTATGACCAATGTTTTATTTGCTACTTGAAAATTTTCCTTTCCTCAGTCTGGGATTTGGAGCACCAAGGGTAAATAAAGGTGCTGCAAAGAAAGTTGAAGAGTTGCCAGTTAAACTTTTTACTTCTGGTTAAGAGAAGGGAAACACAGTGGTATTAGAATTGGTCATGAGCAGCAAGAATTCAGGAGTAAAAAATCAGCAATAAAAAGACTACAGTATAACTAGGTAGGGAATTCTTTTTTAAAAAAGGCATGAATAAAACAGGTATTCTTAACTCTCTCTCTTGTGAGGAATACTTTCAAAAAGTACATAGTAAGACTAAGATACCAAGTTGTATACTAATATTTTTCAGGCCATGGGCCTCAAATATATATATATTCATATATAATACTCCAGTGTGAACAGCAATTTCATGAAATGTAAAATGTATTTTTTAAAATCACACACAAGTATTTATAAGCACAGGGTTCACCAGAAGTCTAAAGCAAGGAGACAGTAGTACAGAAGTGTAGGATTAGGGGACGGAGTTACTCTTCCATAGACAGTTCTGATTGAAGTTCTTCGAAACAAGCGATTTTTTTTTTTTTTACAATAGCCTACACGTCTACTATTGAATACATTTAATATGGAAAAATAAAATGAAGAAAAGATAGGTACTTTAAAGTGTTTGGGTAAGATGCTGTCACGAAGCCTACTCCCTCTCCTTGCTTTAGAGCTCTCTAGTGAAATGGAGGTGAGTTTGATGGAGTACAGTCGGTGACCACTGAAAAACACGAGCCCTTTCAACAATGTTGCAACACCGTTAGTTTTTGGTTTAAAAACACACACACACACACACACACACTCACAAATGCTAAATGTACACACTACCAAATTCTGCGGTCAGCTTTTCCAGGAACTACTGGGGAAAAGTCTCAATGCTGCAGATCCCCGAGGGTGCCCGCACACCCAGCCTTGTTTCCAGATGACTCATTTCACAGTTTGTTTTGATCATTAGCAATGTCCCTTGTCTGCAGAGGTGCAGTGTAGTTACAAGTGCTACATAGCTGTAGTTTTCAAACAAAACCACTTATATCATTGTGCTTAAGTGGAGAGTGTAGTTAAACAATACTGACCCTTGCTTACTGGCCCTGTATTCTCTGTAAACAAGGAGGCTGTTTGAAACAACCGCTTCAGCTCTATTTACAGAAGGGTTCCCACAGTACACACACAGGCACAGTGGTTGATAGGCTTTCTAAAAGCTGTGCGTGTGCCTTGGTCTCTTAAAAAAGACAGTGCTCAAAGTGGAACCTATGTGCAAACTTAAACTCACAACACAGAGTAGCTCAAGCAGCCATTTTGCTCCCAAGTCATCTGAAGAACTTTACCAGATTAAGCCAGTCCCCAGAGTGCTTACATCCACTTGCATTTCTTCTTTTCCTCAAATAAGACTTTTACATGCAAGAGT EMBV3_42289 CACTGGGGACTCCTCTTTGGCTCCTTAAAATTTGCTGCTTAGAGTGGAAGTTCAGCAGGC Gene GeneID:507845|MAPRE1:NM_001075334:937_cdna Constitutive 0 NULL GeneID:507845 13 GENE MAPRE1 EB1 MGC127746 microtubule-associated protein, RP/EB family, member 1 EMBV3_25841 ACTGGCCCAGCATTTACCACACAATGGCCTGAATTCCACGTTTCTGAAGATTTTAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05697 TCATCATGGAAGGCAAAGAAATCCCCATCAAGAGTGAGCCTCTCCCCAAACCGCCTGCAT Gene GeneID:540718|SH3RF2:NM_001083753:5_cdna Constitutive 0 NULL GeneID:540718 7 GENE SH3RF2 MGC149032 SH3 domain containing ring finger 2 EMBV3_13389 CTCGAGGCCGACTCAAAAAGGCTTGTGAACGCACATGAAAAATGGTAGATGCTGGTCCTG Gene GeneID:511378|TMEM97:NM_001034403:100_cdna UTR3_Alt 1 NULL GeneID:511378 19 GENE TMEM97 MGC128928 transmembrane protein 97 EMBV3_16392 CATATTTTCATACAGTCATAACTGTCTGTCTGTGACCCTTTCATAGGGCACTGCAGGATG Gene GeneID:100301114|LOC100301114:XM_002685353:230_cdna Constitutive 1 NULL GeneID:100301114 2 GENE LOC100301114 NULL similar to formin binding protein 3 EMBV3_17776 TCTGGGGAAGAGAACTGTGTCGGGAAGGGTTTCAAGGGACGCCAGCAGAGAAGACTAAAT Gene GeneID:787986|NLGN2:XM_002695803:378_cdna Constitutive 0 NULL GeneID:787986 19 GENE NLGN2 NULL neuroligin 2 EMBV3_10590 CCAGGGTTACACGCCTGCGGGCTGCACACGTTCAAACCTGGCGGATACTGCAGTGGCTGC Variant GeneID:511740|TARS2:NM_001101945:88_cdna 80^276 2 EMBV3_32568 GeneID:511740 3 GENE TARS2 TARSL1 threonyl-tRNA synthetase 2, mitochondrial (putative) EMBV3_02794 TCTTAGATGTAATATCCGTTCTTAACACAAATTTAAGTCACTTCTTGCACCACAGGGGAC Gene GeneID:618035|RAB27A:NM_001101270:7_cdna Constitutive 2 NULL GeneID:618035 10 GENE RAB27A NULL RAB27A, member RAS oncogene family EMBV3_05906 TCTACAGCCTACGGAATAAAGATGTCAAGGCTGCTTGGCTCCGGCTCATTGATCGCCCAT Gene GeneID:785069|LOC785069:XM_002693763:19_cdna Constitutive 0 NULL GeneID:785069 15 GENE LOC785069 NULL similar to seven transmembrane helix receptor EMBV3_16689 TTCTCTGCTCTCTAGAAGCCATTGCAATCCACCTTCATCCTGGCTCCTCTTTGACAGGGA Gene BVT0101_039148 - 1 EMBV3_10686 GK000002.2:92720808-92995055 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00110850 1 XLOC_066752 NonCoding TCONS_00110850 XLOC_066752 NonCoding NonCoding - 2:92751370-92753349 - TSS82471 1979 2 TCONS_00110850_1 57 0.0197069226882264 1 0 2.06250937342094e-05 2.15795112887376e-05 1.87043926729346e-05 8.39227322653557e-06 8.73174581373256e-06 1.80750757431328e-06 2.45566671849445e-07 4.98122821281743e-07 0.000159477219883322 3.95024397299513e-05 0 0 0 2.13925758747186e-05 9.17281091867153e-05 0 0.000142616845978104 0 1.08705339706953e-05 3.63388303251155e-06 0 0 0 0 3.15089734887436e-05 0 0.00011842652050049 9.70709702082646e-06 0 0 XM_005205577.1 COA1 PREDICTED: Bos taurus cytochrome C oxidase assembly factor 1 homolog (S. cerevisiae) (COA1), transcript variant X3, mRNA. 1e-09 69.8 95.35 0.0212228398180899 0 noncoding 0 0 0 0 0.0404354286961146 0.845837641019206 0.0029552017036681 0.955297470536832 ATCAGGGGACTTCAAACATTGCCTTTGAAGTGGGCCCCCAGTTGGGAAGACCCCACTGTTCAGGCTACTTTATAGTGGTAATATACTGCCTGGAAAAAACAGATGCCAAGAAAATGCACAGATTGAATCTCGGAGCATCTGAAAACCTAAAACTTCAGGGGGCCAAGGAAGGTCCTAGTCTTTTGATTTTTTTTTTTTTTTAAAAAGGCCCAAAGTATTAAATTGAAACAGGCACTTCATTTCTTTCCTTCATTTCTCCCTTCACCTCAGGAGACCTATGTTAAATTCCACTTAGATCACAGCTAGACGTGGGTTTGATGGTCTCAAGCCACCTTTTAACTGTACGTTCATCCCATAAATAGAAGATGAATAAAGACGTCAAACTTCATCCATATAGCATTCTGACATACGTGGCTCCCTGTCAAAGAGGAGCCAGGATGAAGGTGGATTGCAATGGCTTCTAGAGAGCAGAGAACTTCAGCATAACGTGGTGAATTTACACATGTAAACAAGAATGTGTGGGCTAGGAGCCCATAGCAGGTGGGGCTGCAGCTGCCAACACTGTCCTAAACGGACATTTGTGGAAGGACAGAGATTGTGCTGATACAGTATGTGTTCGGTGTGGGCCACTCTCCCAAAGCTATCCTTGTCAAACTTTGTGCTTAAATGGCTCTCTTCCGGGCAAGCAAACTAAAACCTATGCTCAAAGCAAGGTGTCCTGAGACCAGATTCAGTTCTTTATCGTCTCAGTAAAAAAAAAAAAAAAAAGATTGTGATATGGGGATTATACTACTAAGATTTATTCATCTCTCTGTGTCCTAAATAGGCAAGGAACCAAATCTAACAACCGGAAAGCAAGGAATACACTGCCAAATATTGATAATTCCTTCCCTGGAATACTCAGGGCTATTTTTAGTTTCTTAATGTAAAAAGCCAGTGAGATGAAAAGTGAAGTGATCCGTTTCCAGAAGAAAAACCGTCGAATCTTCATTAATAATTCCTTGTAGAACGCTCCATGGGCCTTTATCTGACAGCCTGACAAGCTGAACTAAACAACAGAGACTGTAGGAATGTAAAAGACATAATCTTAACACCAAACCTTCTGAAGATGTGGCTGTCATTTTACATTAAAGGCGAGGAGTAAAAAACCTCCATTGAAACAGAAAGAGCTTGCAGCATGATTACAGTGCCAGAATTTAGTGGGGGAAGAAAAGACAGGCATCAGAGTTAGCAAAGGGAGGTATGAAGGGTGCTGAATAACAAGCTTCCTTTCCATGTTTGGTTTGGGAGTTTTGAGAGCAAAAGATGAGGCAGGTAATGATGAGATGCTGTTTAACTGCTCCTAGGCCTAGTGGCAAATCTTCTTTATCAATAAAGACTAACAAGGATTGGGCTAACCATTGTATAAAAACTAACACAAATCTAGATTCTTCTTATGTTTCTATAGCAATGTACACTTTCCAATGTCTCTTCATATGAAAGAGTCTCACTGGACTGTCATAACACCATGGGGTAGTCAGGATAAACATTGCTGTCCTATTGTACACCCGAGAAACCCATCATTCAGAAATATTAAGGGACTTGTCCAGGGTTAAGTATTGGGGTTGAGACCAGATCCAGCTTTCCTTGCCTTTATGCCTGTGCTCACAGTACATTTTAAATATAAGAAGTAAGTGCACACAGCAAACCTTGGGTGATCTGCACAAATTACCGACTGAACAATAACAGCTACTGTCCATCAGAAGCCCAAGGTCTGCAGGAAAGAACTGAAATCGGTGAGAACAGAATAATGTCAGAGAGCAAGGGGTTATGGGAACATACAGATGTTGTTGCCTTTCTGCACTGAGGGTCTTATTGCCTATGAATCGAGCAAAATCAAAGTGAGAAATTGTGTTATTGTGGTATAGTTTCTTTCCCCCAATCATGTTATAATTAGTATTCAGTTCAGTTCAGTCGCTCAGCCGTGTCCGAATCTTTGC TCONS_00103014 TCONS_00103015 TCONS_00103016 TCONS_00103017 TCONS_00103018 TCONS_00103019 TCONS_00103020 TCONS_00103022 . 3' 161380 TCONS_00103014 TCONS_00103015 TCONS_00103016 TCONS_00103017 TCONS_00103018 TCONS_00103019 TCONS_00103020 TCONS_00103022 . 3' 163358 EMBV3_12202 TGCGGATGCAGATCATGACCCACTTCCCCGGAGCCATCTCCGACAGGATCTATATTCACT Gene GeneID:534090|BDH1:NM_001034600:102_cdna Constitutive 0 NULL GeneID:534090 1 GENE BDH1 MGC128244 3-hydroxybutyrate dehydrogenase, type 1 EMBV3_03273 CCACTCTTACTAACACCTGAGCCATGCTACCCCTGTGCGCGTTACTCAGGATGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_04979 AGGAACTTTCCATTCTTCAGCATAACACTCAGGCAGCTAAAGGATTAGGGCTCCTGATAG Gene BVV0102_162231 - 1 EMBV3_41397 GK000018.2:15131889-15186646 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088650 1 XLOC_053436 NonCoding TCONS_00088650 XLOC_053436 NonCoding NonCoding - 18:15164653-15165892 - TSS65996 1239 2 TCONS_00088650_3 51 0.281678773204197 1 0 0 0 0 6.70229705916982e-06 0 0 0 0 0 0 7.39043495507924e-06 0.000147183073891113 4.63159907772164e-06 0.000186033767673104 0 0.000341069657948137 0 0.000101254774110104 0 0 0 0 0 0 0 0 0 7.75236724226351e-06 0 0 XM_867793.5 LOC615876 PREDICTED: Bos taurus carcinoembryonic antigen-related cell adhesion molecule 18-like (LOC615876), mRNA. 3e-65 253 71.58 0.374495560936239 NM_001278392.1 CEACAM18 Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 18 (CEACAM18), mRNA. 1e-38 165 68.61 0.354317998385795 0 noncoding 0 0 0 0 -0.0339784701613902 0.805639953864678 -0.0178283856121021 0.702746114884809 AGTCAGTTTGCCATTTAGGTTACTAGGCTTACTCCTGATCAGCACACTGGAGGGCCCATAGGTAATTGTCCGAAAGATGACTTCATTTCTCTCAATACTGTGTGGGAGGATTTCCATCCCACACTGAAGTGGTGTGTTGCAGATGCTGACCCTTTGGATGATGAGCGTCTTGCTGTCTGGGTCATAGTTGGATACCTGTGAGTAACTCACATACCATTTGTCGTCAGTGGCACTGGAGTGGCAGATGGCAGCCACGGAATCCACGTTCTCTGCCGTGGAGCTGGTATTGACTGAGATCCCTGGGATTTCCAACTCTCGAATCTCAGGCCAGCCAGTTGCTCTCTAGGTCCTGTTGATGGCTTCTACCCACACAGCGTAGCTCCTGTGTCACTTAATTAAGACTCCCTGATCAGCAGGTCATCTGTCATGGCACACTTTCCCAGCCCTTGAACATGGGCCCATGCCACAGGACCAGTTTCCCTCAGAGGCTGCACCTGGGCCTGGAAAGGTCCATGAGTTGTACGGGTCCTCCTGGTGGAGGGGTCTCTCCAGGGACCAGGCAGCCTCTTGCGTGCTCTCACAGACCTGCATCAAAATAACTTTTGATCAAGTATAAGATAAAAAATTCTGAAGGTTAATTGGTTTACTTCTTTAGCATTACATAAAATAAGGGTGTGCCTCACACTTGATATCTTAGATTTAAGAAGATCAATATTTCATTTGGGAAGACACTTTTATTGGCCTTTTGGTTATAAACAGTTTGGCATTCCATCCCTTCAGGACCCCACCCCCGAAATGGAAGGCATGGCACAGTAAAAACATAGGAACTTTCCATTCTTCAGCATAACACTCAGGCAGCTAAAGGATTAGGGCTCCTGATAGAGAAAGATGATGACACAGAGAAAGGGCTTAGTCGTCAAAGGCTTAGTGTCAGTGAAGAAATAAGCAAGTGCAAGTTTTAAAGCTGAAACAGTCTACAGCAGTAGCAACAGCATAATCACACTACCTTTAAGCACCTAAAACCAGTCAGGCACCAAGTGCTTTACATAAACTCATTTAATCCTCTAACAATTGTATGTTCAGTTCACTTCAGTCCCTCAGTTGTGTCCGACTCTTTGCGACTCCGTGAATCGCTGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACCTAAACCCATGTCCATTGTGGCGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCT TCONS_00085590 . 3' 19313 TCONS_00085590 . 3' 20551 EMBV3_30523 AGCCTCTAGAAAGGAATGGAGCCCTGGCGACACCTTGATTTTAGCCCAGTGAGACCCATT Gene BVV0101_016811 + 0 NULL GK000021.2:35655956-36439318 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121150 TCONS_00121148 TCONS_00121153 TCONS_00121147 TCONS_00121151 TCONS_00121156 1 XLOC_073361 NonCoding TCONS_00121156 XLOC_073361 NonCoding NonCoding - 21:36311486-36334571 - TSS90339 302 0.758278145695364 2 0.987003985444464 0.00393172833980081 0.00808178640301005 0.0061953914028209 0.000662497554540401 0.00151441294174684 9.06925459406088e-24 0.00641457327680246 0.00294424137797068 0.00133178644621259 0 0 0 0.000638669632635709 9.15495773660738e-07 0.000617338330574973 0 0 0 0.00218089384446914 0.00145510125970402 0.00783807539752592 0 0 0 0.00859188919337411 0.00219230911502499 0.00162712538353622 0 0 0 XM_868063.5 HTR3E PREDICTED: Bos taurus 5-hydroxytryptamine (serotonin) receptor 3E, ionotropic (HTR3E), transcript variant X2, mRNA. 6e-16 87.8 70.98 0.619205298013245 NR_104234.1 ZNF385B Homo sapiens zinc finger protein 385B (ZNF385B), transcript variant 9e-27 123 78.67 0.493377483443709 0 noncoding 0 0 0 0 -1.58295331924297 0.0143038089538924 0.00429874881560005 0.952455398622437 CAGTGCCAGAGAGATGTGGTGTGGGAAAGAAGGGACTGAACGTTGCTGGCTTTAAAGGTAGAAGGAAGCTGTAAAGCCAAGAAATGTGGGTGACCTCTAGAAGAAGGAAAAGGCAAGGCACGAAAGTGGGTTTTCTCCTTGAGCCTCTAGAAAGGAATGGAGCCCTGGCGACACCTTGATTTTAGCCCAGTGAGACCCATTTTGGACTTCTGAATTCCAGAACAGCAGGAGGAAGCTAGGATGTAGTTAGGATGGCCCACTTACTCGTATCCTCATTCCCAACTTCTTATCTTCTCAACATG TCONS_00119338 r 3' 806 TCONS_00119338 r 3' 883 EMBV3_42006 TATCAAATATTCTGCCCTTTCTGACTTTGCTGATGCCCTTCCTGAGCCTCTGCGTGTGGC Gene GeneID:535956|SCN11A:XM_002696919:443_cdna Constitutive 0 NULL GeneID:535956 22 GENE SCN11A NULL sodium channel, voltage-gated, type XI, alpha subunit EMBV3_19753 GACATCTCGTCGTCCCACCTCGTGGCTCTGCATTATGTTTAACTCCATGTATAAATATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39277 AGCACTGACTACTCCCTCTCAGGTGCTTGTGGAACGGACAGACGTCAGAACACATACGTT Gene GeneID:100336680|LOC100336680:XM_002690474:391_cdna Constitutive 0 NULL GeneID:100336680 10 GENE LOC100336680 NULL MEGF11 protein-like EMBV3_23178 TGAAATCCCACTCATTTGCATGGTTTTGTCAGTGTTATTTCAAGCTAGTGTTTGCATAAC Gene GeneID:508903|TMEM106B:NM_001034337:17_cdna Constitutive 0 NULL GeneID:508903 4 GENE TMEM106B MGC128427 transmembrane protein 106B EMBV3_25895 AAAGCCACTTAGGGGACATTCCTGGTGGTCCAGTGGTTAAGAATCCGCCTGCCAACACAG Gene BVT0101_001775 + 0 NULL GK000029.2:48030332-48068208 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27054 CTGCTGATCGTGCTGGCGGAAATCCGTAATGACATCACCGAACTGCAGGAACAGGTGTTT Gene GeneID:534569|CCBE1:XM_002697839:542_cdna Constitutive 1 NULL GeneID:534569 24 GENE CCBE1 NULL collagen and calcium binding EGF domains 1 EMBV3_35217 TCCCGTGCGAGCCATCAGCAGAGCGGCCACGAGGCGCTCTGTCTCTTCCTTTCCAGTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02325 GATGCTGTCCACATCTGCTCCCACATGAGAAAACCCTCAGCCAGTCAGCAACCCAGTCAC Gene BVV0102_215199 + 0 NULL GK000019.2:62656130-62834849 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07936 CCTGATAGATCCCTCTAGCCTACTATGAAGAGAGATTTTAGACAGCTCTGGCCTACATGC Gene GeneID:538255|HCN1:XM_002696341:17_cdna Constitutive 0 NULL GeneID:538255 20 GENE HCN1 NULL hyperpolarization activated cyclic nucleotide-gated potassium channel 1 EMBV3_12982 ACTGCGACTTGCACTGCAAACCCGCTCGTGGCAGCTACCGCATCAGCCTGAAGAAGTTCT Gene GeneID:787961|NTN3:XM_002697925:574_cdna Constitutive 0 NULL GeneID:787961 25 GENE NTN3 NULL netrin 3 EMBV3_32509 TTCCCTTCGCTGCAACAGCCACAGCCAACCAGATACCCATAATATCTGCCGAACATCTGA Gene GeneID:781653|MBNL1:NM_001099725:68_cdna Constitutive 0 NULL GeneID:781653 1 GENE MBNL1 NULL muscleblind-like (Drosophila) EMBV3_40037 GGCCAGGCCCCGGCCGGGGCAGGAGCGCAGAACCTCTGTTATGCACCTTAAGCCATACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10376 AGTGTGAGATATGAAAAACTTGACCCTCAGAGAGGGATGAGTGGCAGACATGAGGACCCC Gene BVT0102_155275 + 0 NULL GK000001.2:143535445-143569075 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31025 TGACGTGGACACCATATTCAACCTCATCCTGACGCCGGACAAGCCCATCTTCCTTGTCTT Gene GeneID:338048|CYP11A1:NM_176644:31_cdna Constitutive 0 NULL GeneID:338048 21 GENE CYP11A1 NULL cytochrome P450, family 11, subfamily A, polypeptide 1 EMBV3_37051 GGTGACCTTCATTTATCAGAAGCTCCAGGCACAGGAACAGGAGATCACGGAGAACCTGGT Gene GeneID:785202|CCDC159:XM_002688871:244_cdna Constitutive 0 NULL GeneID:785202 7 GENE CCDC159 NULL coiled-coil domain containing 159 EMBV3_14285 TCTTAGAGGAACCCATGGCCCCAGGATCCCCACAACCTTCTCCTCCATTGCAGAACCCGA Gene GeneID:517106|GPR144:XM_002691600:165_cdna Constitutive 0 NULL GeneID:517106 11 GENE GPR144 NULL G protein-coupled receptor 144 EMBV3_34816 AACCAGGAGCGTGTGGCTGGATGGTGAGCAGAATTCAAGACGGCAGTATCTCAAGGCAGA Gene BVV0102_278161 + 0 NULL GK000022.2:54518601-54635350 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21652 CAGCTGTGTCGAGCAGGAGAAGAACCGTGTTGGCTTTCACTTGGATGAGGAGATCCCAGA Gene GeneID:539244|ASB2:NM_001034669:283_cdna Constitutive 0 NULL GeneID:539244 21 GENE ASB2 MGC128924 ankyrin repeat and SOCS box-containing 2 EMBV3_13244 TTCCTGAATCTCCTGGGTGTGTCTTAATTACCAGTCCCAGCACCTCCTGAAAGCATCCCT Gene GeneID:618379|DNAL4:NM_001080918:112_cdna Constitutive 0 NULL GeneID:618379 5 GENE DNAL4 NULL dynein, axonemal, light chain 4 EMBV3_22270 TGGCACCTTTGGCTTTGATAGCTAAGATGTGTTTCATATATTTCTAAAGCTTTTAGACCA Gene GeneID:513065|TAF13:NM_001075597:95_cdna Constitutive 1 NULL GeneID:513065 3 GENE TAF13 MGC140447 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa EMBV3_39084 CTAGACAGGAGAAACACCATGCGACGTGACTTTCATGCCTGGACCCTGTGCCAGCCTGCA Gene GeneID:100299027|LOC100299027:XM_002696984:17_cdna Constitutive 0 NULL GeneID:100299027 22 GENE LOC100299027 NULL hypothetical protein LOC100299027 EMBV3_01480 AATTCATTCAGTCGTTCATTTGCTCAGCCGTGTTCACTCGCCACGCTCTAAGGGCTGTGT Gene BVV0102_167367 + 0 NULL GK000016.2:3498922-3574451 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11281 TTCTTGTCCCAGTCCCCCTTCCTCAAAAATCCTTATGTGGAAACCAAGCTAGAGATAAGG Gene BVV0101_032592 + 0 NULL GK000015.2:29783173-29788842 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21307 ATCCAAGTGGGCTAGCACGAGGCAGAGAGGAGGGACCCTTTTAGGAAATGATCTCAGTTT Gene GeneID:526526|RAB6B:NM_001101129:31_cdna UTR3_Alt 2 NULL GeneID:526526 1 GENE RAB6B NULL RAB6B, member RAS oncogene family EMBV3_28005 TGACAGCAAAGGAACCCAGCACAGTGACAGATGCAGGAGAGCTGTATGTTTGGGGAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20128 CGTGGCTCAGTTTTCACAGCTTCAAACCAGAATTTGTTCCAGTCGAAGAGTGACTCCTTG Variant GeneID:513056|VANGL1:XM_002686102:100_cdna 176^257 1 EMBV3_26168 GeneID:513056 3 GENE VANGL1 NULL vang-like 1 (van gogh, Drosophila) EMBV3_11141 TCTGTGTGGGCTTACCTCACGAGGGACAATGGTTGGGCTTTATGTATCAGGTGACCCGGT Gene GeneID:535132|SIPA1L2:XM_002698788:149_cdna Constitutive 2 NULL GeneID:535132 28 GENE SIPA1L2 NULL signal-induced proliferation-associated 1 like 2 EMBV3_36255 GCCTCAACTCGAGGGCATTATGGCAGTTCAACGGCATGATTAAGTGCAAGATCCCCAGCA Gene GeneID:282457|PLA2G1B:NM_174646:24_cdna Constitutive 0 NULL GeneID:282457 17 GENE PLA2G1B NULL phospholipase A2, group IB (pancreas) EMBV3_32706 CTACTCGTGGTGCCTGGAGTGGGACTCGCTCAAGTTCTCCGTGTGGCACAACAACACGCA Gene GeneID:526787|LOC526787:XM_002696209:260_cdna Constitutive 0 NULL GeneID:526787 19 GENE LOC526787 NULL similar to Tripartite motif protein 47 EMBV3_01472 AGTTCCACAGTGAATTCTAAGGAGCGGTATAGTACCCTACACATCACAGCCTCCCAGCTG Gene GeneID:100296063|LOC100296063:XM_002690626:26_cdna Constitutive 0 NULL GeneID:100296063 10 GENE LOC100296063 NULL hypothetical protein LOC100296063 EMBV3_17346 GCTGACTTTCTAGTCTGGATCAGCCACGCCTTTGGACACTCCTCTGTTCCATTGTGCCTT Gene GeneID:538618|ENDOD1:NM_001102519:20_cdna UTR3_Alt 1 NULL GeneID:538618 15 GENE ENDOD1 MGC157305 endonuclease domain containing 1 EMBV3_20574 AAAAGCAAGAGTATCATAAAGAGGAGATACCACTGCATCTTAAACAGTAGATATCTATCC Gene BVT0102_350441 + 0 NULL GK000015.2:84691579-84777783 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26870 GGGATTCCACCTGGGGTTAGCTTTATGATTGTTTATTGTCTATTTTGCCGTTTATAAACT Gene GeneID:505383|DLG2:XM_002699051:46_cdna Constitutive 2 NULL GeneID:505383 29 GENE DLG2 MPP2 discs, large homolog 2 (Drosophila) EMBV3_30891 CTGGTGGTTATCAACACGCAGGAGGAGCAGCTTCTGGGATGCAGGGGAGCCCAACAACCT Variant GeneID:514797|CLEC4E:XM_002687823:128_cdna 584^699 2 EMBV3_07123 GeneID:514797 5 GENE CLEC4E NULL C-type lectin domain family 4, member E EMBV3_32783 AAACAAAGTTGGCAATTATTCCTGGTGGAGGGGGAACGCAGCGATTGCCGCGTGCCATTG Variant GeneID:614716|AUH:NM_001105436:111_cdna 700^814 2 EMBV3_03793 GeneID:614716 8 GENE AUH MGC140404 AU RNA binding protein/enoyl-Coenzyme A hydratase EMBV3_21551 TCCAAGACTGAAGTGGAAACCAGAGAGGTTGGAGTGGGCTGTGATCTTCTACCCAGCCAA Gene BVT0102_039652 + 0 NULL GK000010.2:52655731-52835255 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017291 TCONS_00017294 TCONS_00017296 TCONS_00017293 TCONS_00017292 TCONS_00017295 1 XLOC_009004 Coding TCONS_00017292 XLOC_009004 Coding Coding - 10:52672855-52785104 - TSS11842 2289 1 TCONS_00017292_4 463 13 0.97972346946048 1.96156765292226e-138 3.50900057128917e-137 1.94417183563705e-248 5.98707664118217e-10 2.28906782700222e-52 3.41461298354387e-150 4.61285604888578e-108 1.189352616746e-20 7.49576419909884e-36 7.80305451887861e-06 7.10754694476948e-13 4.44531551681981e-21 8.92582805941425e-23 7.32707010681961e-06 3.41145947579809e-104 0.00739907938624795 0.000945161216064326 0.0041037945528335 1.59739604525758e-38 2.55445601893886e-26 1.61338733107997e-14 0.00332219574630059 1.16002819957587e-05 0.00282034851425823 3.95530395623392e-32 3.07862935856551e-35 1.90299175860915e-17 1.36832173728081e-05 6.59564153698041e-06 1.65608574589962e-08 XM_005193658.1 POLR2M PREDICTED: Bos taurus polymerase (RNA) II (DNA directed) polypeptide M (POLR2M), mRNA. 0.0 4123 100.00 0.99825251201398 NM_001018100.3 MYZAP Homo sapiens myocardial zonula adherens protein (MYZAP), transcript 0.0 2526 84.23 0.998689384010485 TCONS_00017292_4 sp|P0CAP1|MYZAP_HUMAN MYZAP_HUMAN Myocardial zonula adherens protein; 0.0 825 91.20 0.997840172786177 2 coding 0 0 1 1 0.173777906250088 0.166474365822264 0.0337076248340917 0.478258598002029 ACCCGGGAACAGCGCCGCGCCGAACCCGCCACCAACGCCGCTGCTGCGGGATGCTGCGCTCCACGTCCACTGTCACCCTGCTCTCGGGCAGCGGCTCCGGGGCGCCCAGCAGGAGGGCAAATGTCTGCAGACTACGGCTGACTGTACCTCCCGAGAACCCAGTGCCTGAGCCGAGTGAAAAGAAGGTTGAAAGAAGAGAGCAGCATCGTGACCTGAGCAATGGAGAATCGACCAGGAAACTCCCTCAGGGTGTTGTCTATGGTGTGGTGCGAAGATCAGATCAAAACCAGCAGAAAGAAATGGTGGTGTATGGGTGGACCACCAATCAGCTGAAAGAAGAGATGAACTACATCAAAGACGTGAGAGCCACTTTGGAAAAAGTAAGAAAGAGAATGTATGGAGACTATGATGAAATGAGACAGAAGATTCGACAGCTCACCCAGGAACTGTCAGTTTCACAGGCAAAGCAGGACTATCTGGAGAATCACATCCAAACCCAGTCGTCAGCCCTGGACAGTTTTAATGCCATGAACGCGGCGCTGGCATCAGACTCCATCAGCTTGCAGAAAACCCTTGTGGATGTTACTTTGGAGAACAGCAACATCAAGGATCAGATCAGAAATCTGCAGCAGACATACACAGCCTCCATGGACAAGCTGCGGGAGAAGCAGAGGCAGTTAGATGCGGCACAGGTTGAAAACAAGCTGCTGAAAATGAAGGTGGAATGCTCCCAACAAGCCAACGCAGAGGTGATGAGAGAGATGACCCGGAAGCTGTACAGCCAATACGAAGAGAAGCTGCAGGAGGAGCAGCAGCGGCACAATGCGGAGAAGGAGGCTCTCCTGGAAGAAACCAATAGTTTTCTGAAAGCCATTGAAGAAGCCAATAAAAAGATGCAAGCGGCAGAGATCAGCCTAGAGGAGAAGGACCAGAGGATCGGGGAGCTGGACAGGCTTATTGAGCGCATGGAGAAGGAGCGCCATCAACTTCAACTTCAACTCCTGGAGCATGAAACAGAAATGTCAGCGGAAATAACTGATTCTAACAAAGAAAGGTATCAGCAGCTGGAGGAGGCGTCAGCCAGCCTCCGGGAGCGGATCCGACACCTAGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAAGCAGATGGTTGAGGAGATTGAATCACTAAAAAAGAAGGTGCAGCAGAAACAACTCTTAATATTGCAGCTTTTAGAAAAGATATCTTTCTTAGAAGGAGAGAATAATGAACTACAAAGCAGGTTGGACTATTTAATAGAAACCCAGTCCAAGACTGAAGTGGAAACCAGAGAGGTTGGAGTGGGCTGTGATCTTCTACCCAGCCAAACAGGTAGGACTCGTGAGATCTCAATGCCTTCCAGGAACTATACTCCGTACACACGAGTCCTAGAGTTGACCACAAAGAAAACTCTGACCTAAGCACTTGGAGACATGCACTTTTCACAGATGGACAAAGGCCCTGGAACCCTGCAACCTGAAGTCTGGAAAGGGTGACTGTTGCTTCCTCCTGTACACTGTTTTAAGTCCCAGTGGAAATTGCTGAGGTTTTGCTCCACTTCTAAAACATGAGGCAAAGTGAAGGTGGAAGGGGGAGGGCAGGAGAGAGAGGTTTCAAGGTTGTTTTTCAAACCCCCAACCAGTGTATGTATGTACCCTGCTGTACTGGGCTGTTGTTAGCTTTCCATGTAGACACTGAGCCCTGGCAGGAGAATTCTCTATTTTCTGTTTTACTAGACTTCGGTTGGGAGGAAAAAGGGTATTAACTTGAAATTTCATGCTACTCATGCCAGGATCATTTGTTACAGCATGAAGGTTTTATTTACCCGTAAAAGTATTAGAGGCAGTGTTTCTCGGCTACAGGGAAGCCTGTCCATAGGAGCATGGGCACCTGGGGAAATGTGACCCCAGGAAGGAAGGGGCAGGTGCCGCAGACCCATGCAGGGGCTTGGGAGCCTCGGCTGGAGCCAGTCCTTGTGAGGGCAGACACGTTTCATTCTGATGTGCTAATCCCTCGGTTTAATTTGTGCCTTATGCCTTTATGGGGCCAGCTGAAATCACTGTATTTCTTCAACCTGTGATTTAGTTTTTCTTTCTCACTTTAAATGAAAGAGAATTTTGTATGTTGTAGAAATTTAATCACTTAATGCTTTCAGTATCAATTATTGTTTTTGTTAAAAGAATGAATAATTTGTTCATGCATGCTCTACTTTGATATTATAACCTATGTCACATACGTTTAATAAATGCCATATATTTTGTTCTACTG TCONS_00017289 s 5' 16426 TCONS_00017289 s 5' 17369 EMBV3_26729 AAAGACTGCGCCCCCTATTATGCTAGCTTTCATTCTTACATATTTTCACAGGGAACTTGC Gene BVV0102_105126 + 0 NULL GK000014.2:86098-253709 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054175 TCONS_00129406 TCONS_00122176 TCONS_00054174 4 XLOC_031984 XLOC_078119 XLOC_073731 XLOC_031983 NonCoding TCONS_00122176 XLOC_073731 NonCoding NonCoding - 21:1897254-1897956 - TSS90935 702 1 TCONS_00122176_1 57 0.246438746438746 1 0 0 0 0 0 0 0 0 0 0 0 3.73378582804791e-05 0 0 0 6.98889645112938e-06 0.000748020592763727 5.93502594680712e-05 0.0026800553832602 0 0 0 0.000104538456664462 1.19794127508209e-05 5.18373945952068e-05 0 0 0 4.78890278860463e-05 0 3.76223968750924e-05 XM_005199984.1 LOC101910045 PREDICTED: Bos taurus L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like (LOC101910045), 3e-163 578 96.06 0.504273504273504 0 noncoding TGGAAACAGAACATTTTTTTGACCACAGAAGTTAAATAAGCTATTCAAGATTTACTAGAGAAACACTATAAATTGTTACTCAGGAAGATACAATTCTATTACAACATCATGATTTATTAAAGCATAGCATTCTGTACAACAAAGGGCCTTAACAGGTGTCTATTTTCAGCCAAATTTCTCTATAAGTTAGTTTCTCTTAATCAAAAACATGTTATACTTTAAATTATTAATTTAACTGATGAGGAAGTTACCATAATATCTATTTTAACACTGAACAAATCTAACCACCTCTTGGACATTAATGTAAAATCTTGACATAGAATTTGATTTAAAACTTCTCACAATAAATTCATTAAAGCAAGTTCCCTGTGAAAATATGTAAGAATGAAAGCTAGCATAATAGCAGGTGCAGTCTTTACATTTTATTAACCATAGAAGATACTTTTTTAACGAGTCTAATAGAGACATTAACTGTGCAAAAGCTGATGAGATTTACAGTCTTAAAATACAAGCACCAACACAGAGAGGATATTGTGTCAGTTCAGTTCAGTTCAGTTGCTCAGTCATGTCCGACTCTTTGTGACCCCATGAATCGCAGCATGCCAGGACCCCCTGTCGATCACCAACTCTTGGAGTTCACCCAAACTCATGTCCATTGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCACTT TCONS_00118522 . 5' 177323 TCONS_00118522 . 5' 177323 EMBV3_13187 GAGCGGTAGCGGCTGCATCGGGAGGAGCAGGTTGCAGTTGTTCTGATGGACACCCAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01614 TCTGAACCAGAAGAGGGTTCTCACAACAACGTCACTCAGAATGGCACCTTGATCTTGGGC Gene BVT0102_094706 + 0 NULL GK000013.2:2543544-2802401 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044294 TCONS_00044296 TCONS_00044300 1 XLOC_026171 Coding TCONS_00044294 XLOC_026171 Coding Coding PAK7 13:2472616-2794697 j TSS32592 4692 1 TCONS_00044294_4 719 0.0428388746803069 11 0.985466343765524 5.46266769936884e-12 0.000267577305916449 3.64459607409432e-07 0.000680399212632 1.57003865155816e-16 1.34059853830865e-05 0.000508022176969629 2.89069607096002e-05 0.000346984564929412 9.39959024355626e-16 1.11034784616048e-13 3.72604878751373e-05 3.12051463037101e-05 2.14092241596721e-05 2.64391841770546e-15 6.23630954634901e-10 0 1.25465600998687e-11 4.7387877326172e-05 0.000978893460580155 2.19733067967362e-05 0 1.06309729839176e-13 2.06903373037622e-12 0.000616998247488764 0.000141112218969517 0.000194127850083189 4.78985041755111e-06 1.68634735267971e-11 3.32541914517698e-12 NM_001206594.1 PAK7 Bos taurus p21 protein (Cdc42/Rac)-activated kinase 7 (PAK7), mRNA. 0.0 4524 99.96 0.534953111679454 XM_005260765.1 PAK7 PREDICTED: Homo sapiens p21 protein (Cdc42/Rac)-activated kinase 7 (PAK7), transcript variant X2, mRNA. 0.0 4116 87.85 0.69458653026428 TCONS_00044294_4 sp|Q8C015|PAK7_MOUSE PAK7_MOUSE Serine/threonine-protein kinase PAK 7; 0.0 1364 92.07 0.998609179415855 4 coding 0 0 0 0 0.157869801127717 0.526786376385558 -0.033466024174043 0.505229191880921 AGAGAAGGTACTGCAATGAGAAGAAACCTGTACACCACAATGGAGAATAGATGTGCAGTAATGAAGACCTAGCACAGCCAGAGAGCCTCAAGAGAGATCCCTAACCTCTTCTCCACTGCAAGACACTGGCTTCTGAACCAGAAGAGGGTTCTCACAACAACGTCACTCAGAATGGCACCTTGATCTTGGGCTTCCCAACCTCTGGAACTGTGAGCAACAAATCTCTGTTGTTGAAATACACTATGGCAAAATGTTCCCACCTCTGGCCAAAATGAACACTGAAGAAAAATGAAGAGCAGTGAAGAGCACCAACAAAAAGTTGCAGAACAGAAATAGCCACACTCCTCTGGAGTCTGATTCATCCACAGCCATCATAAAAAAGGTTTTGCATCATGTTTGGGAAAAAAAAGAAAAAGATTGAAATATCGGGCCCATCCAACTTTGAACACAGGGTTCACACTGGGTTTGATCCACAGGAACAGAAATTTACCGGCCTCCCACAGCAGTGGCACAGCCTGCTAGCAGACACCGCCAACAGGCCGAAGCCCATGGTGGACCCTTCCTGCATCACGCCCATCCAGCTGGCGCCCATGAAGACAATCGTTAGAGGAAACAAACCCTGCAAGGAGACCTCCATCAACGGCCTGCTGGAGGATTTTGACAACATCTCTGTGACCCGCTCCAACTCCCTGAGGAAGGAAAGCCCACCCACCCCAGACCAGGGAGCCTCCAGCCGTGGTCCAGGCCATCGGGAAGAAAACGGCTTTCTCACCTTCTCGCAGTATTCCAGCGAATCTGACACCACTGCTGACTATGCGTCTGAAAAGTACAGAGAAAAGAGTCTCTATGGAGATGATCTGGACCCGTTTTATAAAGGCGGCCACTCTGCCAGGCAAAATGGGCACGTATTGAAGATGCAACATGGGGAGGCCTATTATCCTGAGATGCAGGCTTTGCAGTCCGACAGAGCCCGGTTTCCTGCAGATTATCATGCACACTTGGACTCACTGAGCAAACCCAGCGAGTACAGTGACCTCAAGTGGGGCTTCCAGAGAGCCTCGGGCAGCTCCCCTCTGGATTATCCGTTCCAGTTCATACCTTCTAGAACTGCAGGGACCAGTGGGTGCTCAAAGGAGAGCTTGGCATACAGCGAAAGTGAATGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCATCGTACCTGTGTCAGACGAGCCCTCAGCCTGCCATGCGGCAGAGGTCCCGGTCAGGCTCCGGGCTCCAGGAGCCCATGATGCCCTTCGGAGAAAGTGCATTTAAAACCCACCCCCAAGGACACTCCTACAGCTCCTACACGTACCCGCGCCTGTCTGAGCCCACAGTGTGCGTTCCAAAGGTGGATTATGATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAGGGTCCGACACCTACCCCAGGGGTCCCAGCAAACTACCTCAGAGTCAAAGCAAAGCAGGCTATTCCTCAAGCAGCCACCAGTACCCATCTGGGTACCACAAAGCCACCCTGTACCACCACCCCTCCCTGCAGACCAGCTCACAGTACATCTCCACAGCTTCTTACCTGAGCTCTCTCAGCATCTCATCTAGCACCTACCCTCCACCCAGCTGGGGCTCCTCCTCAGACCAGCAGCCCTCCAGGGTGTCCCACGAACAGTTCCGGGCTGCCTTGCAGCTGGTGGTCAGCCCAGGAGACCCCAGGGAATACTTGGACAACTTTATCAAAATTGGGGAGGGGTCGACCGGCATTGTGTGCATCGCCACAGAGAAACACACAGGGAAACAAGTCGCAGTGAAGAAAATGGACCTCCGGAAGCAGCAGAGGCGAGAGCTGCTTTTCAATGAGGTTGTGATAATGCGGGATTATCACCATGACAACGTGGTTGATATGTACAACAGCTACCTTGTTAGTGATGAGCTCTGGGTGGTCATGGAATTCCTAGAAGGTGGTGCCTTGACAGACATCGTTACTCATACCAGAATGAATGAAGAGCAGATAGCTACTGTCTGTCTGTCCGTTCTGAGAGCTCTCTCCTACCTTCACAACCAAGGAGTGATCCACAGGGACATAAAGAGTGACTCCATCCTGCTGACAAGCGATGGCCGGATCAAGCTGTCTGACTTTGGTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCAAAGAGGAAATCCTTGGTTGGTACACCCTACTGGATGGCACCCGAGGTGATTTCTAGGCTGCCATATGGGACAGAGGTGGACATCTGGTCCCTTGGGATCATGGTGATCGAGATGATTGATGGTGAGCCCCCCTACTTCAACGAGCCCCCCCTCCAGGCCATGCGGCGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCTCCACAAGGTCTCCTCAGTGCTGCGGGCGTTCCTAGACCTGATGCTGGTGCGGGAGCCCGCTCGGAGGGCCACAGCACAGGAGCTCCTCAGGCACCCGTTCCTGAAACTGGCGGGGCCGCCGTCCTGCATCGTTCCTCTCATGAGGCAATACCGGCATCACTGAGCGCAAGAGTCACAGAGGTGACGAAGCCAGATGAGGATGCGAGAACAGGTCGGGAGAATGCAGGGAACCGCAGAACATGCAGCAGGCCTGCGAGCCCAGACCAGCTGACTGATGACGACCGGCAGGGCTCGGCAGACCGGGGCGTCCTCTTGTGTCTTCAACAGGCATCTCTCCACTGACAGCTGGCACGCTCATTTGGGACATGGCTTTAATAAGTCATTATTATATTTTTCAGCCTTTCATCCAGCAAATCAGAAGGACTCAGTACAAACTCCGTTATGGTATATCCTAGCCACATGCAGGGTAATGCATAGGATTTTCTATATTGAAAGAATACTTTTCTGGCAAAAAAAAAAAGAAAGGAAAACAAAAAGCACTTTTTTCTTAATGGTAGCGGTGTAATGTATTTTGCAATGAATTTGTAATTTTTCTGTACGATAGTTTTGATAATTTATAGTACTTTGATGTCACGTAGCCATTGTATCAGTTGAAGTAATACCTGTTTACTAGCAAGAGTTTGAAAAAAGTCTTTCCTACTTTTTTATCCCTTTCAGAGAACCAACGATTCTTTAGGAACTTTGAATACTGAATGACTCTCAATCACCGTCAGCTTTAGTAGAATATCTTTCTTATCTTAACAAGTGTCTTATGTGATGGAAGAAGACTTAAGAGTGATGGTGATGGGGGTGGGTGCACATTTCATTTATCCAACCAAAAATAATGCAGTGAAATTTGAGCCACGGTATACCACCAAAAATATTCCTTGGGAGAAAACGAAATATTTTGAAAAACCACATTTTCCTTCAAACCTATTAGTAGTAGTAAACCATCTTTTGCACGGCAGTATGTTCCCCCAGTACCTTCTCTTAAATGAGTATGATGTCCCCTTGTGGCCAAATTTCCCCTCCAAGGAGCAATTTCAGTGCTAGGATGGTTTGATGTATCTGTGGGAGGTGCTGAACTCCATGTTCTGCCCCTGTGCCATCTTGATTCAGCACCCCAGTGCTAGGGTCATTTGGACTTCATTCCCCGAATTGAATGTTTCTAGAAGACTGTGAGAATTCTAGTCTCACAGAAGGAAAAGAGAACAGGGCAAGATGTTTGGTTTTGTTTGTCACTGTTTTGAAAGCTCTGTATGCTGGCACACCAAACTCTTGTCTGTGCTTCCCTTTGTACCGCAGTATTCATTGCTGTTGTTTCTGTACCGTGCTGGGAGTCTGGACTCTAGAGGATGCATTAGGAAAAGGGGATTTTTCCCAGGTGTGATCTGAATTCAGTTGTGACCATGTTACGTGTTTCTGACATAGGAGAGTTGTGCTGCTGACTAGATCTTCTTGAATGTTGATAAACATGAATGACTACTACAATACATTTTGTGTTGCTTGTTGGAAGAATTTGCATGTTAACTGTAGGCCAATATAGATTTGCCTTTAAAACTCTGGAAAAGCTACATAGTCATCATTAGTTTCTATTAATTCTGCATCAAACAAAAGCCATTTGTTACCAAACTGGAAAACCAGAGGCTTTTCTTAATGACTTCACATACTGTAACAAACATGAATTTAAAATTTTGAAAATGCTCTGGCTACTCTAAGCCTAACTAAGAATGTTTGTAATTAATAGGTTGCTAATTATTTATTATAGCTAAAAAGGAAAAAAAGGCATAAAATGACTTTCTACTGTTTAGATTTTCAGTTTTTCTCTAAACTGGAAATGCCTCATCATAAATAGGATCTATAATTTTTTTTCATAAAACACAACACACTCAATGTTTTATGTAAAATATTAAAATATTAATATAAGGCTGTAAGAATGAAAATAATCTAAATCCAGAAAATGGCAGATATGGGAGAGATTGTATTCATTTAACCAGGACTATGTAGAAGTAGAAAGGAAGCAAAAAGAAAATCTTTTTTTAACCAGAGCAAATATTAAAAACCATTGCAGAAAATAGTGGATTTTGGATTCCAAACATTTTCGACAGTGTAATGGAGATTTTTCTGTAATTTTCTTATCACTGGGTCTTTTTTAAAGTCTTCATTGAGTTTACCAAAAGTTACTGTAGCTTAAAAGGTTTTGTGAGCATTAACTATTGGCAGAAACTGCTCTTGCAAATAAAAATAAATGTTTGCCTTTTTTT EMBV3_09939 CGAAGTGGTTTGGAAGGAAGCATGGTGTATGAGATGGTGTCTGTGCTTTTGTGCCAGCTC Gene GeneID:539867|SYT4:NM_001098108:112_cdna UTR3_Alt 2 NULL GeneID:539867 24 GENE SYT4 MGC142968 synaptotagmin IV EMBV3_20251 GACAACCCATGCACCGATGAGAACGACTACCGCCAGGAAGCCCTGGTGCAGATTGCTCAT Gene GeneID:613700|LRRC23:NM_001038199:70_cdna Constitutive 0 NULL GeneID:613700 5 GENE LRRC23 MGC133823 leucine rich repeat containing 23 EMBV3_13735 CTGATGCTGCTGTCCGTGGTGTTTGTGGGGCTGGCGGTGTTCGTCATCTACAAGTTTAAA Gene GeneID:537536|SORCS1:XM_002698520:133_cdna Constitutive 0 NULL GeneID:537536 26 GENE SORCS1 NULL sortilin-related VPS10 domain containing receptor 1 EMBV3_22798 TAATGACATCGCTTTGCTGTTGCTCAAATCCCCTCTGAGCTTGGGTGTCAGGAAGGTACC Gene GeneID:783359|LOC783359:XM_002689471:12_cdna Constitutive 0 NULL GeneID:783359 8 GENE LOC783359 NULL similar to rCG52155 EMBV3_10990 GTAAGGCTCGAGATGAGAGTATGTGTGGAAGGAGGATGATTATGCCTGTATCTCATGACT Gene GeneID:540525|GTF2E1:NM_001103294:86_cdna Constitutive 0 NULL GeneID:540525 1 GENE GTF2E1 MGC166282 general transcription factor IIE, polypeptide 1, alpha 56kDa EMBV3_13607 CCCAAAATGCTACGGGGCAATGACAGCTCAGTTCCAAGAAACAAAAATCCATTCCAAGAG Gene GeneID:100140328|SCFD1:XM_002696695:70_cdna Constitutive 1 NULL GeneID:100140328 21 GENE SCFD1 NULL sec1 family domain containing 1 EMBV3_30203 CCATCAATGAACATACTGCATGGCCTTGGAGAGAGACTCTGGGCTCTTGGCTCAGATGTA Gene GeneID:782743|MTMR4:NM_001102328:75_cdna UTR3_Alt 2 NULL GeneID:782743 19 GENE MTMR4 MGC139322 myotubularin related protein 4 EMBV3_10060 CGTTCCCACCCTACTCCCTGCAGGATCAGGCTTGTTGGCTATATCTTCCATCCTGTCACT Gene GeneID:508048|PIGQ:XM_002697901:504_cdna Constitutive 0 NULL GeneID:508048 25 GENE PIGQ NULL phosphatidylinositol glycan anchor biosynthesis, class Q EMBV3_12391 CGACCAGAACTCCCCTCAGCCAGCTGGTCGGTTTGAGGGTTGCCACGGCAACAGCCACTT Gene BVT0102_326545 + 0 NULL GK000001.2:2196115-2204894 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09874 AGGCAGGATGCTGAGCTCTATCTCTGAGCCTTGGATGCCCCTAGTCTCTTCTTCCTGGTT Gene GeneID:100337088|LOC100337088:XM_002691669:430_cdna Constitutive 0 NULL GeneID:100337088 11 GENE LOC100337088 NULL endoglin-like EMBV3_12955 AAGATCCCCTACAAGTACGAGCACAATAAGCTATCTTAATGACTTGGACCGCGTTGCCGA Variant GeneID:536654|GNAQ:NM_001110002:38_cdna 425^579 1 EMBV3_27235 GeneID:536654 8 GENE GNAQ NULL guanine nucleotide binding protein (G protein), q polypeptide EMBV3_20571 GTCACCCGCACGTCGCGCCGCTGCCCCGCAGAAATGCTTCGATTACCCGCAGTCCTTCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32063 TGGGATGTAGCGAACCAGAAGGGGCAGAAGCTGCGCGCAGAGCCACAGACACAGCTGGAT Gene GeneID:784718|LOC784718:XM_002689201:86_cdna Constitutive 0 NULL GeneID:784718 7 GENE LOC784718 NULL hypothetical LOC784718 EMBV3_32876 CACCACTCTGGTCGGAGGCCCCGAGTACGTGCACTCCCCCTCCGACCTTGAGGCCCACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17753 GGAACCCCATTCTTCCTTACTCTGGAAGTGGTGCTACAAGTTTTCGAACCTTTTGAATAA Gene GeneID:511317|TFAP2C:NM_001075509:991_cdna Constitutive 2 NULL GeneID:511317 13 GENE TFAP2C MGC143174 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) EMBV3_43416 ACCAGGTGTCAGTCTCTTGTCATGTAAGTGTCAGGACTTAGCTGGACCGGGATTGTGGGT Gene GeneID:539884|RFX5:XM_002686042:242_cdna UTR3_Alt 2 NULL GeneID:539884 3 GENE RFX5 NULL regulatory factor X, 5 (influences HLA class II expression) EMBV3_07660 GGGGTGATGACTTAGAGTTGATCTGGTGTTAACTGCCTTGATGATCTCTTTACTGTTGGG Gene GeneID:530577|SACM1L:NM_001102131:134_cdna Constitutive 3 NULL GeneID:530577 22 GENE SACM1L MGC159686 SAC1 suppressor of actin mutations 1-like (yeast) EMBV3_40953 AACCTCGACATGCTCAACACCCTGATCAACTTCCTGGATCCCGTGTTCGCTGAGCACTTA Gene GeneID:506254|TBC1D21:NM_001075248:74_cdna Constitutive 0 NULL GeneID:506254 10 GENE TBC1D21 MGC134018 TBC1 domain family, member 21 EMBV3_06667 ACAGTGGCTGTGGGAAAGTCTATGGAAAATCCTCCCATCTCAAAGCCCATTACAGAGTGC Gene GeneID:539139|KLF9:XM_002689641:10_cdna Constitutive 0 NULL GeneID:539139 8 GENE KLF9 NULL Kruppel-like factor 9 EMBV3_32631 CATCCCCTTTGCAGGTACCCTGATCCTAAGAAGCCCCCAAATACAGACACAACCCAGTGT Gene GeneID:514971|CYP2S1:NM_001100366:619_cdna Constitutive 0 NULL GeneID:514971 18 GENE CYP2S1 NULL cytochrome P450, family 2, subfamily S, polypeptide 1 EMBV3_26601 CTATTCTGAGTTCAGGGTCACAGTTTAAAAGTCCTAGAGTCCAGCTCCCTCTGGCCACTT Gene BVV0102_296468 - 0 NULL GK000022.2:9738682-10160884 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29115 AGAGTTCATTTGAATGGGAGAAGGCAAGAGAGGTGGCTGCAGCCTTCACAGAGCAGATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40019 CCCAGGAAGAGAGACTCAGAGGTAGTGAGCATTACATATTCTCAGGAATGGTTTGGCCCC Gene BVV0102_121682 + 1 EMBV3_07784 GK000012.2:51245843-51361347 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26929 GTGGTATGATAAAGAGGTTTTCTGGGCTGCTGCATGGAAGTCCCAAGACCACACTGTCAG Gene GeneID:513924|PSTPIP1:XM_002696628:161_cdna Constitutive 0 NULL GeneID:513924 21 GENE PSTPIP1 NULL proline-serine-threonine phosphatase interacting protein 1 EMBV3_11052 TCAATCAGAAAGCAGAAAGTAGAGCCTTGCCCACTCTGATGGCCTCACTCTGAACCACTG Gene BVV0101_069708 + 0 NULL GK000011.2:62528076-62812718 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025119 1 XLOC_014674 NonCoding TCONS_00025119 XLOC_014674 NonCoding NonCoding - 11:62666072-62674010 - TSS18310 566 0.0671378091872792 3 0.929066397883331 2.40383203180077e-05 0 1.63498215985827e-05 0.000733582306116682 0 0 1.03033778091651e-05 0 6.97009096785148e-05 0 0 0 0 0 0 0 0 0 0.00120360135613127 0 0 0 0 0 0.000195857966845116 0.000211612955647399 1.03518543796349e-05 0 0 0 0 noncoding 0 0 0 0 0.128650499704386 0.411488495319585 0.000593362974932576 0.991290060220586 GGCTGGTATTCCTGCTCAAGGGACCCTCCTGAGCATTCTCTCAAGTCAGCCTAGAACGATCACTGTGACCACATGCTTGGTTGATCCTACCTTCTAGCAGACCAGCAGCTGCCCCCCAGGAAGGGGATCTTCTAGATTTGGGGATCGAACCTGGGTCTCCTTCAAACAATAAAGGAGTTCCTCCCAGACTTCCAACCTCTATGGACAACATATGAATTGACAGCTGACCTGCAGAGAGATTTGATCATCTCAGATTACAACAAAAGTTTAATTACTAAGTGAACATTGGTGAGAGGCTGTGTCAAAGGAGTCCCAAGGAGGTGGTAGCCCACGGAGGAGTCCTCGTTTTCTTAGGAAGAATGAGAGTAATGAAGAAGGGTGTGGAAGGAACCTGCATTTTTATTCAATCAGAAAGCAGAAAGTAGAGCCTTGCCCACTCTGATGGCCTCACTCTGAACCACTGATTCCCCCCGACCCCCTTATCCCCACTCCAGCACACCCAGTCCTCGTGGTGATAAAGGCTGTCTCCTAGTAAGAGCAGGAAGATTTGTGACAAGACATCTTAA TCONS_00028055 r 5' 137978 TCONS_00028055 r 5' 137978 EMBV3_14351 ACTGCACGGTCCTCATGAACCCACGCCTCTACAGCCTGCTGGTTTTGGTGTCATTTTTCA Gene GeneID:514002|LOC514002:XM_002688825:274_cdna Constitutive 0 NULL GeneID:514002 7 GENE LOC514002 NULL similar to Olfactory receptor 18 (Olfactory receptor 145-1) (Olfactory receptor TPCR34) EMBV3_27500 TGGCCTTCTACGCCACCTGCAACACCCCAGCCGACAACGCGGGCTTCCTGTACAAGAAGG Gene GeneID:785809|LOC785809:XM_002694578:642_cdna Constitutive 0 NULL GeneID:785809 17 GENE LOC785809 NULL similar to CG12393 CG12393-PA EMBV3_17233 GTGCTATATAGTCAGGGTACCTACTACCAATTTTCGCCTAATTCCGGCAACACTTTGTCC Gene GeneID:505728|MRPL53:NM_001045926:2_cdna Constitutive 1 NULL GeneID:505728 11 GENE MRPL53 MGC128710 mitochondrial ribosomal protein L53 EMBV3_06849 GAATGTTAATTGTAGAAAGGGCAGTAGCAGGCTATGAGAAGGGTACGGGTGAGGGGGATG Gene GeneID:515590|HSPA12B:NM_001102027:1093_cdna Constitutive 0 NULL GeneID:515590 13 GENE HSPA12B MGC166098 heat shock 70kD protein 12B EMBV3_16532 ATGAGGCCTCCAACCTCTATGGCATCTCAGGCCTTCTCTGCCTTTGCTGATCTGACCATC Variant GeneID:507199|FAM125A:NM_001034283:38_cdna 728^789 1 EMBV3_25083 GeneID:507199 7 GENE FAM125A MGC127521 family with sequence similarity 125, member A EMBV3_19310 AGAGCAAACAGGGTCATTGTTATTCGCTGTCGAGATGGCTTTCCCATCCACCTTGAGGAG Gene GeneID:783907|ANG2:NM_001099396:115_cdna Constitutive 0 NULL GeneID:783907 10 GENE ANG2 NULL angiogenin 2 EMBV3_04511 AACTCAGACTAGTGATCAAAGGAATCACAGCCATGTCTCACCCAAACACCAGGGGTCACG Gene GeneID:537895|PKHD1:XM_002697311:174_cdna Constitutive 0 NULL GeneID:537895 23 GENE PKHD1 NULL polycystic kidney and hepatic disease 1 (autosomal recessive) EMBV3_37871 AAGTAGCCCCTCCAGTGAGCATTTGATAAAGCCAGGCAGGCTCACCGGACTTTCTGTAAA Gene BVV0102_036270 + 1 EMBV3_17853 GK000024.2:41437427-41532521 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142689 1 XLOC_087114 NonCoding TCONS_00142689 XLOC_087114 NonCoding NonCoding - 24:41524084-41525486 - TSS106900 1402 1 TCONS_00142689_1 127 0.0549215406562054 1 0 0.000504633092528929 0 0 0 0 5.10279223960488e-06 0 0 0 0 0 0 2.04656527206836e-06 9.05904668481592e-05 0 0.00154475475608791 0.000461831115053308 0.00016106838310358 0 0 2.16528758544992e-06 0.000338746562725295 0.000163588598710201 0.000418518963149849 0 0 7.52244272304917e-05 0 0 0 0 noncoding 0 0 0 0 -0.0535964217142617 0.717810821669604 0.022201262848238 0.6333145227679 CCTTGGCTTGATAAGTGTTTATTTGTGGGAAGTTCAGAAAAGGATGATGACTTCTGGTCTGACCCAGACTGTGAGAACACTTTGAGAAAGTCAACTAAACCCCCTTCTATCTCTGCCTCTGAGTCGCGTTTCCCTCCCACGGATCAGATCACTTATCGAGCACCTACTGTGCGCGGGCGCTGTGGTACCCATGGGGGCCTCAGTGGTGAGGAGGACAGTCTCTGTCCAGATTGAGGGGTGGGGAAGAGGGGTCCTGGGGATGCCCAAGGGCGACTAGGGCAACGTGGAGATGTGTGCAGACCATCTGGGGAGCGCAGGGAAAGCCCCCTAGTCTGGGTGGAGTGGGGGCTGGTCAAGGCCTTCCTCCACGCTGGAATGTTGTAGAGATAAGTTCATTCCTTGAGTTCCTTAGAAAAGCAAGTGAACGTGCGGCACTGGGTGAGGTGTAGCTGACGTTGCCTCACCTGAATGCCCCCACCTGAGCAGGTGGCTCACAGGGTCCTTCTGGGCGCACTGTTGAGTCTCATCTCCACAGACTCCGCACAGATCCTGTTCCGCCGGCCTCACCCTGTCCAACTGCAGAGTCTGGAAAAGACCACCCGCCTTGTGCAGGTGCTGCTGACCCAGGAGGGTCACTCAGGTGATGCCCCCAGCCGACCTCAGACTGGAAGTAGCCCCTCCAGTGAGCATTTGATAAAGCCAGGCAGGCTCACCGGACTTTCTGTAAAGAAGCATAGCAGAAACCCTGAGGGATTTGAGATAATAAGCCTATTTTATCAAATTACAACTGAACAAAATGTTGGTTTTGTTGTTGTCGTATTACTGATCAAACCAGAAGTTGTTTTGGTTTAAAAGACACACAGAACTCACCAGGGTATGAAACTGAAAAGACTTTTAATAATTGACCTATTTAGTGAAAATTGTCCAGGTGCAATATTACTTTCAAATGGGATTTCATATTCATGGAATTGAGTTAGTCTGATGTGGCTAGCATGGTTTGTCAGATAAAGCTTTTCGAAGTTTGAGAAACAGGAGAAAAAAAAAAAACTGGTTGGCTGTAGAAATTCACAAGTCTCTAAATACCATGTCGACCTGTGTTTCTTATATAACTGTTGGAAGCTCGCTGTTAATTTTGTTTGGATCAAAATGTTTTTACCAGGCAGCACCCCTTACCCCACTCCCAGCAACTTACATTTCTAGAAAAGCACTCTAAAAAACCTAGGCTCTTGATTTTAGCTTTTCCATGAACTAGTCTGTGACTTTGGATAAGTAATTTATTTTGTCTTTGTGTGTAAACAGTTACATTCTGTTAGTGGCAGCTACAGTTTCTTGAGCACATACATTGTACTAGCAAAAATACACTCTTTCTAAACCTCACAACAATCCTGAAAGTTTCCCCATT TCONS_00138998 . 5' 7035 TCONS_00138998 . 5' 7035 EMBV3_27689 CCAGGGGAAGGGGCTGTTTCCCCCAACGCGGTCTCTGCAGTGCTGAGCACCCCGATGTGG Variant GeneID:539221|MFSD2B:XM_002691507:477_cdna 616^912 1 EMBV3_27043 GeneID:539221 11 GENE MFSD2B NULL major facilitator superfamily domain containing 2B EMBV3_39642 GCCACAGAGCTTCCTCAGCTGGGGGAAGGAGGGTTGATATTTTGTTAACTTCTGTCCCAT Gene BVV0102_036475 - 0 NULL GK000002.2:131387447-131410545 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02299 TTCCTGGACCCTCACACAACCCAGACCTTTGTTGACACTGAAGAGAATGGAACGGTTGAC Gene GeneID:408003|ATG4A:NM_001001171:13_cdna Constitutive 1 NULL GeneID:408003 X GENE ATG4A Aut2a ATG4 autophagy related 4 homolog A (S. cerevisiae) EMBV3_23810 TCATTGTCCAGCAAGACTTAGACTATGTGATTGAGCTCACTGGGGCTGACTGTGACCCTG Gene GeneID:533348|PAAF1:NM_001075990:13_cdna Constitutive 0 NULL GeneID:533348 15 GENE PAAF1 MGC139812 WDR71 proteasomal ATPase-associated factor 1 EMBV3_35057 GCTGTAACCAAGTGCCGCCCACCTTCCCAACCTGGCGGTCTTATTCTCCGATGGGTCTTT Gene BVV0101_000735 + 0 NULL GK000012.2:79429463-79432048 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037375 TCONS_00037377 TCONS_00037381 TCONS_00037371 TCONS_00037370 TCONS_00037378 TCONS_00035756 TCONS_00037379 TCONS_00037383 TCONS_00037376 TCONS_00035744 TCONS_00037382 TCONS_00035748 TCONS_00037372 TCONS_00035743 TCONS_00035750 TCONS_00037374 TCONS_00035745 TCONS_00035753 TCONS_00035746 TCONS_00035751 TCONS_00037373 TCONS_00037380 TCONS_00037369 2 XLOC_021368 XLOC_020990 Coding TCONS_00037371 XLOC_021368 Coding Coding STK24 12:79429673-79492421 j TSS26979 4945 1 TCONS_00037371_3 335 0.0705763397371082 11 0.921366758570131 0.00319611026596917 0.000871612784981328 0.00169359348279698 0.00152260154253688 0.00039830973934638 0.000421636564715494 0.000743352231067908 0.00136373783730501 0.00105755819183305 8.97590821183656e-05 1.81278499948961e-05 4.01557820061377e-29 1.02623782822357e-15 6.05693764621709e-26 1.75175851146495e-28 9.15374671532281e-33 3.30479813052957e-31 3.50049179448747e-56 0.000771457500320277 0.000621686158818061 0.000113381111929969 5.57668426050041e-43 3.43579520367513e-64 1.23659015558877e-42 0.00329205941550063 0.00200060668095172 0.00142073170892784 4.49225135920999e-29 9.55125700513357e-35 2.16362693208275e-38 XR_227385.1 LOC100140518 PREDICTED: Bos taurus serine/threonine kinase 24-like (LOC100140518), misc_RNA. 0.0 6648 98.36 0.766835187057634 NM_001032296.2 STK24 Homo sapiens serine/threonine kinase 24 (STK24), transcript variant 0.0 2583 84.30 0.483518705763397 TCONS_00037371_3 sp|Q9Y6E0|STK24_HUMAN STK24_HUMAN Serine/threonine-protein kinase 24; 0.0 648 97.61 0.997014925373134 2 coding 1 1 1 1 0.0872545967698142 0.805460231369001 -0.0975512668132296 0.0754753361229542 GTGAAGGACAGGGAAGCCTGGCGTGCTGCAGTCCATGGGTTGCAAAGAGTCGAGCGACTGAACGACAACAACGGTTTTTATTTTGGGGACTTTAAGTCAGCCAACTAGTTAATGTAAAACACTTGGGGCTAGAGATGGAGAATGGGTGTCCTTGGTGGTCAGCTAGGCGGGAGAGGAAGGGGCTGGAGAGGAAAGACTGGACACGCAAGCTGCGGGGGGCCCCTCTGCCCCCTTCTCTGCTGTGAGGAGAGCAGAACCTAAAAGCAGATCCAGAAGAGCTTTTTACCAAACTGGAGAAAATCGGGAAGGGCTCCTTCGGCGAGGTGTTCAAAGGCATTGACAATCGGACTCAGAAAGTAGTCGCCATAAAAATCATTGACCTGGAGGAGGCAGAAGATGAGATCGAGGACATTCAGCAGGAAATCACAGTGCTGAGTCAGTGTGACAGTCCCTACGTAACCAAATATTACGGATCCTACCTGAAGGACACTAAATTGTGGATAATAATGGAATATCTTGGCGGGGGCTCTGCACTGGACCTCTTAGAACCTGGCCCTTTAGATGAAACCCAGATTGCTACTATATTAAGAGAAATACTGAAAGGACTTGATTATTTGCATTCGGAGAAGAAAATTCACAGAGATATTAAAGCTGCCAACGTCCTGCTCTCTGAACACGGGGAGGTGAAGCTGGCGGACTTTGGAGTGGCGGGCCAGCTGACAGACACCCAGATAAAGAGAAACACCTTCGTGGGCACCCCTTTCTGGATGGCGCCCGAAGTCATCAAGCAGTCAGCCTACGACTCAAAGGCGGACATCTGGTCCCTGGGCATTACGGCCATCGAGCTTGCCAAGGGGGAGCCGCCGCATTCCGAGCTGCATCCCATGAAGGTCCTGTTCCTTATCCCAAAGAACAACCCCCCGACGCTGGAAGGGAACTACAGCAAACCCCTCAAGGAGTTCGTGGAGGCCTGTTTGAACAAGGAGCCGAGCTTTAGACCCACCGCTAAGGAGTTACTGAAGCACAAGTTCATAATCCGCAATGCAAAGAAAACATCCTACTTGACCGAGCTCATCGACAGGTACAAGAGGTGGAAGGCCGAGCAGAGCCACGAAGACTCCAGCTCGGAAGACTCCGACACGGAGACGGACACAGACGGCCAGGCTTCCGGAGGCAGCGACTCGGGGGACTGGATCTTCACGATCCGGGAGAAGGATCCAAAGAGTCTGGAGAACGGAGCTCTCCAGCCGTCGGATCTGGAAAGAAACAAGATGAAGGACATCCCAAAGAGGCCTTTCTCCCAGTGTTTATCTACGATTATTTCTCCGCTCTTTGCAGAGCTGAAGGAGAAGAGCCAGGCATGCGGAGGAAACCTGGGCTCCATCGAGGAGCTGCGCGGGGCCATCTACCTGGCGGAGGAGGCCTGCCCCGGCATCTCGGACACCATGGTGGCCCAGCTGGTGCAGCGGCTGCAGAGATATTCTCTAAGTGGTGGAGGAACTTCATCCCATTGAAATCCCTTTGGCATTTGGGGTTTTGTTTTTCCTTTTATTTTTTTCCTTCTTCACCCTCTTCCTTTTCAAAACTCAACGAGAGCCTTTGCTGACTCCGCTGAAGAGGCGCACCATCGGGGGGCCGTTCCCGCCGCAGGGTCGCTTGTCCAGGGCCCCACAGCCCTTCCCTGCTGGCCTGGGGCCTGATGGACTCCGGATGGGGTGGGGGAAGGCCAGCTCCTCCAAGCGATTATTTTATTATTCTCGTTTTTAATTTTAACCATAGTGCACATATCAAGGAAAGTGTCTTTGAAAACAAAAATAAACCCTGAAATGTATATCTGGGATTATGATAAGGCGACTGAAGAAATGAAACCTCAGGTATCCTGCTTTACGTTGATAAGCACCCTGCCCCCGCCCCGCCCACCCCCACCCCAGGAGATGGAGAAATCGCTCTGGTGGATCAGTGTACAGACTTGTAAATAGCGTCATTTTTACGGAAAACCCTCTCGGCGTGCATAGGAATCACTGTGCACACATCGGCCAAGTGCTTCTGTAGATACCGTCAGTGGAGTAAATATTTGACAGGCCATAACTTGAGTCTATTGCCTTGCCTTTATCACATGTAAATTTTGAATTATGTGACCAGTGATTTGGGTTTTATTTTGTATCTGCAGGGTTTGCCATTAATAATAATTAAATGCCCCTCTTCGGGAACACTCCCTCTGTTTGTACCTCAGCAAATGCAGATTTTTTTCCTCCTGCGTGCCCTACGACCCCTTCGGTACACTTAGAAGTTGATTTTCCTGTTTTCATCGATGGTACTATTTCTTAGTGTTTTAAATGGAAACATATCGCGCCTCATGAAGCTTTAAATTATTTCCAGTTTGTCCCCGATGAAGCGTCCTTGTCTCACTTTGGCTGGAGCCGCGCCCGGCCCGTGTCCCGCGCCCGCCGGCCCGTCCTCCCAGTAGGGTTTTCTGTTGCACCTTGTAGTGAAACCTGCATATCATCTTTCGAAACCTCAACGTGTCTGAATGCTTTCACGAATAAATTTTGTAACAGGATTTCTGCACACTCTCCTTGAACGTGACTCTTTAAGAGGGGGCAGTGTACCCGCCATGTGATGTGTGTGTGTGTGTGTGCACTGATGAGGCTCCAGGAAGAAGTGCCCACATTCAAGCTACGGAAATGCCCAGGTCAGCTCCCTATGCAACTTTTAAAAATGGTCCTCTGAAGAGATGGGTGACTGCTCCTGGTTGGTGAAACTGTTCCGTCTTCTGAGTCGTTTGCTTTTTTCCTTCAAGGAGCAGGTGTCTCCCAGTTGGTCAGCCAGCTGTCTGTCCTTTTTTCAGCCCGTGGCAGGGGTCTCTGGGATGGGAGGTTGAGTTCTTGCTGTGATTCTTCACTGATCTGAGTTACGTGTGACATTCTTATATATTTGTTGATACGAAATCATAGTCGACTCTTGCTGGAGTAGCAGTTCTTGAGGTGGAATCCAAGGCTTTTTGGAAGGAGGGAAGTTACTGGGTAAACTTGAGGACAGGTCAGTTATCTGCAGGCCCAGTGTCCTGGAAGTCACCGGGAGAGACTTCTGAGGGGTGTTTCTTGTTTGTTCGGCAATGGAATGGAACTAGTTTTTAAAACTCTAAAATTGTCATGGTTTTTAAATTAAAAGTAGATTTGGGTTGTTGTTGATTTCTGTAAGGGATACATTTTGGTTAGGAGACATAGAACCACATGCAAATACGTTAAACAGGAAGAATTGGGAGGATTTCATTTTGTGTTTTGGAGAGAGTTATGAGGGGGCTGGCTGTTTCCCTACGTGAGGCATAAGCCACAGGTGAGTTTTGTTCGTGACTGGAGAAAAGCATCAGAGGACGGAGCCGTGTTCCCCTGGGGGGTGCCACTCAGCTGGTCTCGAGAGCCCCGTCACAGCAGCTTTCTGACCTCGAGTTCTTCAGACCCGCATACGGACAGTGGTTTGAAGACCAGACGCTGGCGTGAGCGATGGTGATGCTGACGGGTGGACGGGACTCTGGGCTCGGTGAGGTGGTGCGACCCTGGTGGGCAGCAACGCACGTCTCCCAGGTCAAGCGGCCGACTGCTTTGGGATTTAGTTGGAAATATCTAATGTTGATGGCCTTCTGGAGGAGGGGAAAGGCGCACTTTGACCAGCTTCGGAAAGTGGGTCCCCTTCCCGTGAGTTCTCTGGCTTGCTTTCTGTAGACAGAGCATCTTGCCGAGTCAAGGGAGCTCGCATTGGTCCACGTCAGGTCCTTTGTTAAAAGACAGACAGGCACCAGCGCTCCAGCAGGACCCCCTCGGGCCTGTAAATGGCAGGTGGTGGTCAGCCAGACGTGTGAGCTCAGCACTTGAGGTGCATTGAGCGCCACACCGGAGCCTCTGGCAGTCAGCGGGCTGTCTGGCCACCCTGCAGGCGGCAGGGGCGCCCAGTGGAGGGCGGCAGTGGGGGCGGTGGGCCGGCCGTGGCTGGCGGTTCACCCTTGCACAGTTGTGTCTTCTGCATGGGCTGCACCGTAACAGCCTTGGGGTTGCTGCGCTGTAACCAAGTGCCGCCCACCTTCCCAACCTGGCGGTCTTATTCTCCGATGGGTCTTTTGAAGCGTTTTATTCTTTACGCGGCATTTTGTACCTTCCTTTTTGGCAAAACATGCGGTCTATTTATAAGCATTTTTATATTTTTTCCTTCCTTAAAAAAACATGGCTTCTGTATTTCTGCTATAAAATAATGGCAATAACTCGGGAGTGCTGCTGCAAGGTGTGTTCTTAAGCACAGGGTCTGTATCATGCGAGGGTCAATAAAGTTCACAGAAACAAATTGTTTTTGGAATTGTCTTTGTGTGTAGAGCGAATAGACGATGTTTGTGTTGTGGTTCTGCCCCACGCCCCCCAACCCCAGGTCTGCATGTATGAGGTGGTGTCGGGTCCTTGGAGGTAAGTGATGAGGGTGGAGCCCTCAGGACTGAGGTCAGCTCCACAGCGATCCATCACCCTTTCCGCCACCTGGGGAGACGGCCTCTGTGAGCCAGCAAGCGGGCCCCCACCAGACACCCAATCTGCCAAGAGCTTGATCTTGGACTTCAAGCCTCCAAAAACTGTTAAGACAGACTGGTTTTCCTGCTTGTTTATTAAGAAATGTGTTTTATATGCGACCCCTCGATGGTATGTTTAACAGCAGCCTGAATGGGCTGAGGTGGAGGGTGTCCCTGAAACCCAGTGTTTCCAGCAGCTTGGGGGTGGTGTGAATCACCCCCGTGATCTGGACTTGGGTTCTCTTTGACATCGCAGAGGGACGCAGGTAGGTGTGAACAGAAGACTGACCTAGGAGACGACTTCTCCCCAAGTCTTGTAGAGGTGAGTGACCAGGGAGGCTTCTGAAGATGCTAGGGGACTGGGATCAAATGGGTGCTGGTCCTCCCCATCTCGCC EMBV3_04233 GTCTGTTCTGAGCTGTGTCTATAGGAAAACAACAGCAGGAAGCTGAGAGGATAAGCGGGG Gene GeneID:540839|POLR3B:XM_002687660:30_cdna Constitutive 0 NULL GeneID:540839 5 GENE POLR3B NULL polymerase (RNA) III (DNA directed) polypeptide B EMBV3_07299 TAGCTAAGGGATTTGGAAGCTTTTTTGGGGGAGGCAGGCTGGGAAAAGGGTAGAGCTGGA Gene GeneID:540265|TRIM41:XM_002689053:23_cdna UTR3_Alt 2 NULL GeneID:540265 7 GENE TRIM41 NULL tripartite motif-containing 41 EMBV3_02154 TTGCTTCTGCAATTCCTTTCTGCCTAAAAGCGTGTTCCTTTGCTCTACGACGAGACCCGG Gene GeneID:541223|ASPHD2:XM_002694618:167_cdna Constitutive 0 NULL GeneID:541223 17 GENE ASPHD2 NULL aspartate beta-hydroxylase domain containing 2 EMBV3_19697 AACTTCTCGCTGACCTACCTCCACAGCTACAGACCTAACTCTTACTGCCTGTCTCCTGCA Gene BVT0102_147424 - 1 EMBV3_13027 GK000008.2:59784219-59797488 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00231977 1 XLOC_141465 Coding TCONS_00231977 XLOC_141465 Coding Coding - 8:59784686-59785480 - TSS173481 794 1 TCONS_00231977_1 77 1 0 0.000359847769662244 0 0 0 0 0 0 0 0 0.000326465228748163 2.88310634887356e-06 0 0 5.92442858496004e-06 0 0 0 0 0 0 0 0 1.15542163402612e-05 0 0 0 0 0 0 0 XM_005210090.1 UNC13B PREDICTED: Bos taurus unc-13 homolog B (C. elegans) (UNC13B), 8e-20 102 100.00 0.0692695214105793 NM_172691.3 Fam214b Mus musculus family with sequence similarity 214, member B (Fam214b), transcript variant 2, mRNA. 7e-08 62.6 94.87 0.0478589420654912 0 coding 0 0 0 0 0.0844640591489102 0.823161844420431 0.0204791150499522 0.779099260476162 CAAAGTGATGGCTGCAGGTCGCCTGAGGGCCCACCCCGGACACGTGCGGCTTCTGTGATGACAGGTCTAAAGGGGCGGGGCCTCATCCCACAGTGTGCAGCCTGGGCTGACCAGATCCGGCCGGAGATGGGGAGCCAGAACCTGCGCCAAAGCGCTAGCTTGTGGGCGCCCGAACCTGGTTGGAGCCCTCCCAGGCTTTCGAGCTGGTGTGAGCTGCCTGCGGAACTTGAGCCTCTTAGTGAAGGCGTCTGGGTTAGCGCGCGTATTTGCCCTAATAGGGGAGGTCTGTAGGGTTTGCAAAGTAGTGCAAAGAACTTCAGAATTCTGTGAAAATGCGGGAATCTGGTTGGCGGGGGTCTCAAGTCTGTGAGGAGGAGCAGTTTCTGTAGCCTACGGTGTGCAGGAGACAGGCAGTAAGAGTTAGGTCTGTAGCTGTGGAGGTAGGTCAGCGAGAAGTTTGTGAATTTTATGAGCCAAAGTAGAGCCTTTGCTTTGTATAAGTGTCGACTGAACTATGTGACTGTTACACACGTTCTGTAATTTCATTAGCGCCTGAGTCTTCAACTTCCCGGGAGCCCCACGAGTTCCCAAGATATGTCCAGGGGAGGGCGATGCTTACGAGCTACCGGTAGATGGCAGCCCAGGTCCCTTGCAGAGCTGAGTGGCTCTGAGCCCAGAGCCTAGTAAGCTTCTCGATGGAGCCGGAGGTATTGATGGCTGTGTGATGGACTGGACCTGGTAAAGTTATCTCGAAGTCTCAGATTCTTTAGATCTCTGTGACTTCTTTCTGTGAG TCONS_00227773 TCONS_00227774 . 5' 469 TCONS_00227773 TCONS_00227774 . 5' 469 EMBV3_12654 CAGTTTCAAAGTAGAAGTTATTGTGTGCCAGCTGTTGTGGTGTAGTGGGTGGGGCCAGAG Gene BVT0102_382208 - 0 NULL GK000022.2:39774874-40090002 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09195 CCCGCGCGGCCCCATTTCCGCTCCAACAAGGGAACTGCTCGCAGAAAGAAGAAGGTGGTT Variant GeneID:281031|BTF3:NM_001025314:103_cdna 116^184 1 EMBV3_08876 GeneID:281031 20 GENE BTF3 MGC128310 basic transcription factor 3 EMBV3_27589 GGTTTTAGGTCAGTGGAAACAGCCATGTATTCTTTCTCTGGGATGCTCAAGCCCGAGGCA Gene GeneID:518298|TEX13A:XM_002707878:128_cdna Constitutive 0 NULL GeneID:518298 X GENE TEX13A NULL testis expressed 13A EMBV3_04593 AAATGCTGTGACAACGTGCGGGATGCAAAGAGCCTCTCCAGCTGTGACTATGCTTCTGAA Gene GeneID:539454|GCM2:XM_002697617:130_cdna Constitutive 0 NULL GeneID:539454 23 GENE GCM2 NULL glial cells missing homolog 2 (Drosophila) EMBV3_19199 GATACAGCATTTCTTGCACTTAAAAAAAAATCTAGAAAGTTTTGGTGGGGTAGTGTTCCC Gene GeneID:512694|RBM17:NM_001101083:13_cdna Constitutive 2 NULL GeneID:512694 13 GENE RBM17 NULL RNA binding motif protein 17 EMBV3_27362 ATAACAGTGATGTTTCAGCCAAGTCCAGAGCCCCAAGATCACAGATGGCTATGTCTGGCC Gene GeneID:509764|EIF1:NM_001014884:103_cdna UTR3_Alt 1 NULL GeneID:509764 19 GENE EIF1 SUI1 eukaryotic translation initiation factor 1 EMBV3_33182 GAACCGGATCAGGACCGATGAGAGGACCAAGCTCTCCAATGAGGTGATCAACATGCTTAT Gene GeneID:100139854|ZNF862:XM_002687144:533_cdna Constitutive 0 NULL GeneID:100139854 4 GENE ZNF862 NULL zinc finger protein 862 EMBV3_00428 GTCAGACGGACTACATTTATCACCAAAAGGAAACGAGTTTGTATTCTCCCATCTCTGGCC Gene GeneID:614320|IAH1:NM_001034758:219_cdna Constitutive 1 NULL GeneID:614320 11 GENE IAH1 MGC128806 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) EMBV3_36510 GGATGATCTCAAGTCATACATGGCCCAGATGGACCGGGAACTAGCACATACCAGCATTGC Gene GeneID:524184|ECD:NM_001046271:338_cdna Constitutive 1 NULL GeneID:524184 28 GENE ECD MGC137386 ecdysoneless homolog (Drosophila) EMBV3_24512 ATGGTGATTCCAAAGGGACAGTTTTAGAGGTACATCTTTATCTATAGCTGGGGGATATTC Gene BVT0102_006973 + 0 NULL GK000009.2:41438726-41469870 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237185 TCONS_00237189 TCONS_00237186 TCONS_00237191 TCONS_00237190 TCONS_00237192 TCONS_00237187 TCONS_00237188 1 XLOC_144660 Coding TCONS_00237189 XLOC_144660 Coding Coding CEP57L1 9:41468687-41554319 j TSS177376 2784 1 TCONS_00237189_2 418 10 0.967605189709334 3.78340159960065e-31 1.26865868595068e-41 7.3014699115827e-07 0.00034690735158122 0.000291228654745509 0.000120215378459149 2.40169676833226e-19 1.38880752080144e-12 0.000180343046493481 4.11171592328143e-60 2.27139108653124e-10 1.10262342771741e-06 4.21205742411575e-24 3.04244115491557e-05 1.38178242521363e-54 9.92266068649538e-75 6.64497274985215e-05 1.84544045077874e-97 0.00087406013116943 1.67344295616991e-18 9.51445173560639e-21 1.6155645789207e-44 7.94088184472982e-57 7.3165649187476e-05 5.2778610740633e-05 3.65389458679425e-21 8.95811910523919e-24 3.46421555200879e-99 1.9487299342455e-52 2.69603240303774e-11 XR_235823.1 CEP57L1 PREDICTED: Bos taurus centrosomal protein 57kDa-like 1 (CEP57L1), 0.0 2810 100.00 0.55926724137931 XM_005266938.1 CEP57L1 PREDICTED: Homo sapiens centrosomal protein 57kDa-like 1 (CEP57L1), 0.0 1687 81.10 0.624281609195402 TCONS_00237189_2 sp|Q8IYX8|CE57L_HUMAN CE57L_HUMAN Centrosomal protein CEP57L1; 0.0 568 72.45 0.997607655502392 2 coding 0 0 1 0 -0.015207150218846 0.932194721691942 -0.0163451249283032 0.778729837217608 CCTGGCGTTTGGCTTCTTTGGACCGAAAAAGGGGAAAAAAAGAAAGTAAGGGGAGGTTGAAGTACGCTATCACAGACAACACAAACAGGGAAAAGAAAGTGTGCACAGACGTACACCTGGAAGTGCCTGAATCTAAGTTTAAGATAATGGATTCTGAATTAATGCATAGTATAGTCGGAAGCTATCTTAAACCCCCAGAAAGAGTGTGTGTTCCATCCATCACTCGGAGTGATGAATCATCTCAGACTCACTACTCTGTGAACTTAGAACTTACATCTTCTCAAATGCTTCGTAGTCCAAATAGCCAAGAAGCGGCACAATATAAAAAGGCCTTGGAGAATGAAACAAGTGAGAGAAATCTGGCACACGAGGAACTGATAAAGCAGAAAAAAGATATAAGTATGCAGTTAAGCTCAGCCCAGTCTCGCTGCATCCTCCTAGAGAAGCAACTAGAATATACAAAGAGAATGGTTCTCAATGTAGAACGAGAGAAGAATATGATCCTAGAACAACAGGCCCAGCTTCAAAGGGAAAAAGAACAGGATCATATGAAGCTTCATGCAAAACTTGCAAAGCTTGATGTCTTAGAAAAAGAATGTTTTAAACTTACAACAACTCAGAAAACTGCTGAGGACAAGATTAAACATTTAGAGGAAAAACTAAAGGAAGAAGAACATCAGCGTAAGCTTTTTCAAGATAAAGCTTCTCAGCTTCAGACTGGACTTGAAATCAGTAGAATTTTAATGTCTTCAGTAACAAATCCAAGGCACTTCAAGGAAAAGAAGAAATCTTCAAAGTCTGCCAGTGCAAGCCATTCTGCAAATGCAAGTACACATAGCCTCCAAACAGTGCAACATTCTGGGCCACATATCCTTCAGAAACCAGCTGAAGTTACTGAGCTTAGATGTCTCTACAAGCCTTCTAGAACAACTTCTCAATGTAAAGCTGTACCTTCTGACTCAGAAAAGTCCATTTCTATTTGCCACAATTTGTCTGAACTTTTGATGGCAATGCAAGATGAGCTGGACCAAATGACTATGGGGTACCAAGACCTGCTGAATCAAATGAAAGAAACTGAAAGCCAATCCGTCTGTGAAGATATAGAATGTGAACTAGAGCGTTTAGTCAAGAAAATGGAAATTAAAGGAGAACAAATTTCCAAACTAATGCAGCATCAAGAAAGCGTCCGCAAACTGCAGCAAAAAGTTCAGAATTCAAAGATGAGTGAAACTTCAGCTATTCAGCAAGAAGATAGCAACTGTAAAGGAACAAAGAATATAAAAAATAGCTCCAGAAAATGTTTGCTAACTAACTCTCTTCAAAAGAACAACAACTGTCGTCCAATACGAGTCCATAATCTTCAGATGAAATTGAGACGAGATGATATTATGTGGGAACAGTAACACAATAGCAAAACTATCATCTTGAATGAACTTTGTCAATGAGATCTTGAACTGTCTAAAGTGGTTTTAATTTAATATACCTTTGTGAAATTTTGCATTATGTTTCTAGCCTCTATAAAGTATCAAATTGTAGTATTTTTAAATGAATGCCTAATGACCTCCTAAGAAACCCAAATAATAAATGATTGCTTTCCTGTTCTTTTTTATTGACTAAAATACCTCAGCATACCATGTTTTAGAAACATTGTTCACTTTGCAGATACATTAAGTTTAAAACATTATACTAGACTGATGATATTTAAAATTGAGTTGAATTTGAGATATAAGTGCCATTCCACTTTTTCATTTAGTAGGCTTGTAACCTTAAGAAGATTATAAAGAACAAATATAAAATTAACAGAGTATGGACAGGCCTTTTAACTTTTCTTGTGCTTCTTCCCTGTCTTGTTTTAGAGCTGGGGAATGTTTTTCTTTTTTGGAAAGGGAAAAGCTTTGTGAAGAGTCCTTTAGTCCATTTTTTAATGTGACAATTACAAATAGGAACTCATAGTTAACTAACTCTTAGATGACAGTAATCCAACTGTGAAAGCCTTTCTCTGCTATTCCCATTCTCTTTTATAAATCTAGCTCTTGTTTTTTTTAATCTGACTCCTTTATAACTATATTTTTATGCTTTGATTAGTGATGCCATAAGATATTTCTTTGTACATATATGCTTTATAGTGAATTTCCATTTGTTGACCTGTCTTTCCAGAAATGTGTGGAAACTAGTACAACTCTACTGAACTTACTTTGTTTCTCACCAGAATCCTTTGGGGCAACTAGAGAATTGGAGTCACCACCTGATGGAGAACTAGAAGACTGACACAAAAAGCATAACAGAAGGGAGGAGCTCAGAAGATAGGATAGCAATTTAAAAAATGGTGATTCCAAAGGGACAGTTTTAGAGGTACATCTTTATCTATAGCTGGGGGATATTCAAGCTATAGGTATGAAAGAATAAAAAGATCAAGATCTTGGGGAGCTAGGAAATGCAATTTTTTTTAAAGATAGTCTTTATATCCTCTTAGGAAATCCCAAAGATTATATGTAGGAGAAAGAGAGTAATTGTGGGCTCTTTGTGGAGGAAAGAGAAAAACTATAATTCATTCTTATGAAGAGAAAAAGAGGTGCTTCTCAAAGACCTTTCCATACCTGAAGTGGAGATATGACTGAAAATGGGCAGATTTATACTTGGAATTGTCCTTGAAAGTAACTAATGACTGAAATAAACGTTTCTCTGCCTCTGGTTTAAATGTTGTCCTTCACCCACTTTCACTCCCTCTCCCCTTACAGCTCCTTCAACCCAAGAGATGTTCCACAGACTGCTTCATCTAAACTC EMBV3_20896 GGAAATAGGAGACAGCAAAAACCCTCAAAGAACTGGCACTGCCCAATAGTTGCATTTATC Gene GeneID:539464|PCDH18:NM_001102229:47_cdna Constitutive 2 NULL GeneID:539464 17 GENE PCDH18 MGC165815 protocadherin 18 EMBV3_02179 ATATTTAATATACAAGTTGACACAGTTGGCCTTCCTTGGGCTGTGGTCAGCTGCTGTACC Gene BVT0101_004073 + 0 NULL GK000026.2:45551564-45588053 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152513 TCONS_00152516 TCONS_00152514 TCONS_00152512 TCONS_00152517 TCONS_00152515 1 XLOC_092356 NonCoding TCONS_00152514 XLOC_092356 NonCoding NonCoding - 26:45580395-45587891 - TSS113740 3956 3 TCONS_00152514_5 100 0.540444893832154 2 0.472448298865911 5.09848314074741e-08 4.41583953004718e-08 0.00053115524093062 5.32358550590675e-40 4.30763121724072e-10 0.000116901142962165 0.000401638840699041 0.000608788580674333 0.000134115086230052 3.37283786169421e-05 2.09756630966596e-05 4.63694354549664e-06 3.28258157807789e-05 3.9210849622216e-17 0.000123702714536501 0 0 3.20221330041765e-06 0.00174312132377959 0.00156973277555723 0.000109124587513444 3.01108818610901e-06 0 0 0.000764074261748433 0.00020422794065545 0.0013279719843398 0 4.26659474537247e-05 6.23012849034912e-06 XR_226508.1 LOC101908196 PREDICTED: Bos taurus uncharacterized LOC101908196 (LOC101908196), 0.0 719 100.00 0.100353892821031 0 noncoding 0 0 1 1 -0.432043153210829 0.197898273102537 0.0446657824191792 0.35266346399567 GGGAACTGTAGTGCGCCTGCGCCTGTCAAGGCTCTTCGGAAACTAGGTCTCGCGTGTCTGCCTTCCCCTCCTTCCCTGCCCCCAGCGGCCACCTCCTCCAAGTGTGCTTCATCCTCTGTGGCCTGCTCTGCCCTGCAGGAGCTGCATCCTGGACCTTGGTTTCATCCTCTGTGGCCCGCTCTGCCCTGCAGGAGCTGCATCCTGGACCTTGGCTTCATCCTCTGTGGCCCGCTCTGCCCTGCAGGAGCTGCATCCTGGACCTTGGCTTCATCCTCTGTGGCCCGCTCTGCCCTGCAGGAGCTGCATCCTGGGCCTTGTAACCAGTCAGCACTCTCACCTGTTTCCCTGCCTCCCCAGTGCCTGATGCCATCACCACTCAAGAGACGTTGCTGCTTCAGCGAGTTGTCCCATAAATCTGTGACTGCTGGTGATTCTCCTTTGCCTGGAATACCTTTCCCTTCCTCACCTGGCTAATTTATTCCTAAAGACTCTCCGTCGCATGTGTCATCCCTAATAAGTCTCTCCTGACACCTCGCTCCCTCTCCTTATCTTATGGGGTTTGTTCCTGAAACTTGTATGCAGCTTTATCTGGCACTTTCCCCTTTACAGAAAAATTGTTATTTTTGGCGTTTCTTTAGTCACTAGGTCGCGTCCAACTCTTTGCAACCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGGGTGGGTTGCCATTTTCTCCTCCAGGGGATCTTCCCAACCCAGGGCAGACAGATTCTATACCACTGAACCACTAGGGAAGCCTATAGAAAAATTACTTATTTGTATCTGCCTCCCTTGCTGACTGAGCTCCTCGATAATGTCCTGTCTGAGCATCTGTTTTATAAGTACCAGAGCAGCATCAGCCCATGAAAGTGTTTTAGCCCTTAAGCTAATGTAGATCAAATGACTGGTGCCAACAGGCTTTTAAAATACTTATCGAAATGTTTCAGACATAAAAACCTTGTTGGCTCCAAGATATATATAATATCACAGAAAAAAGCTAAAAATGTTAATGAATGTGTGTCTCCAATATATTGCAGTGTCAATGTCCGTAATTACTAAAGTTAGTATTCACACAGTTTGTTCCATTCTAGAATAATTGGTGCATTAGATTTTCTCTGCTTATAAAAATCCTCCCGGCCCATATGATGATTTCAGAGACATGTCAGTCAATCATAAACTCATTTAGTTACTTGTGGGACACAGTATTTACCAAAGCAAAATTAGAAGTCTTTCACCAAGTTTTTACAGTTATATGTGAGGCAGGTGTGCCTATGGCCCTAGGGATTCCCAAACAGCTGTGCCTACACAGGAAAATTCCAGGGAGCTCTGAGACGGGCTTGGGTCCTTCTGTTTGCCAAGGGCCCCTCCGTGACCTAGTGTCTTACACCTCCGCAGCCTCACGTTGTCCGTTGCCTCCTGGACCTTGGAAGGCCCTGATTTTCTGACTTCCACTCCTGGACTTTGAGCTGGAAGAGGATGTGAGATGTCTGAGTCAGTCTCATTCCTCTTTAGATGAGAGCAGTGCCATCCAGAAAGGAGAATAGAATTGACCCACTGAACATCATGCAAATCTAGTGTAAATAGCAAAGGCAGGACCAGGTCTCTGAGTACTAGTACTGTTAGCCTCTAAAAACGTTAAATTGCAAACACCAGCCAGTGGAATGTTAATTTGCTTTAGAATCACCTGAGGAACTTAAGTGAGCAGATCCTCTACCGTCTCCAGATTCTAAGATGGTATCACTGGGGCAGTGCTGAGCAATCTGTGTTTTTAGTGAGTTTCTAGCATCTGACCACCTTGCCCCGCAGACCACACCTTAGAACAGCAATCTCCTAAAATAATTCCCTGGGGTACAGGAAAAACTATGGCTTCTGTTTTGTTTGTTTGTGTTTTTTAATCTGAAGAGTAAGGGCAAACAATTCAGAGGACAGATGAGCCTGGCAGGCTACAGTCTATGGGGTCACAAAGAGTCAGACATGATAGTGACTATCACTTACTCACAAACCTTACTATTATGGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCCACTTGCCAATTCAGGAGATGAAGGTTTGATCCCTGGCTGGGGAAGATCTCCTGGAGAAGGAAATGAAACCCCCCCTGGGAAATCCCATGGACAGAGGAGCCTGGCAGGCTATGGTCTATGGGGTCACAAAAGAGTTGAACACAACCTAGCAACTGGATAACAACAACAAAGCCTTACTATTAATATATTTAATATACAAGTTGACACAGTTGGCCTTCCTTGGGCTGTGGTCAGCTGCTGTACCAGTCCAGTAAAATTGGGTTTGCAGCCAAACCAAACAATCCCCAAACATCAGTGACTTACAACCAAGGATGCCAGATAAAACAAATTTCAGATAAACAGTGAAAAAAAAAATGGGGTGAGAATGCCCAAATATTTAGTAGAGGCGTCCCGTGTGACATTTGGGACATGCTTTCTCTAGGCCAGGTAGTTTTTGCTCGAGGACCCAGGCTGATGAAGCAACCTGGACCCGAGCTCTGCCAGTGGGAGTGGCAGAGAAACAGATTGGTGGACCATCAACTAGCTCCTGAAGCACCTGCTCAGAAGTCACAAACATCCCCGCCACTCACTTTTTTTGGCCAAAATGATACATTTTGGCAAGCTTAGCATCTGGGTGGAGGTAAAGACTAATGGTCCACAGAGGAGGGTCATTGGGTGTCCGTGGACCATTGTGCAGTCTACCGTGGCATATGGTGGCTCGGGCGGGCCACTTGATGCCATCACATGGTAAAATTTGGTGACAAGGCCTTTAGGAGAGGCTTTTCAGAGTGTTGTGATAAGGTGAGGTGTGACCTTGAAAATCTCATGTACCACACAGAGATCACAGAATTTATTGTGGCAAAATACTTAAAAATCAATTTTGACAATCGTTTTTTGGCAAAAAATATTTCACATTTCCTCATCTTTTCCATGATGACTAGTAGCTGTCATGAGGGTGCTGTAGGAGAGTTTCACAAAAATAAACAGACTTAACCTCTTCCTTCAAGATAACAGTGATGTTTTAACAATGAGTGAGAAAGTCATTGGTTTTCAAAAGAACTGAATCTCATGGAGAGAGCATTTTTGAAAACAGAGGTTTGCAAATCTTTCCAATGTTTGTGATTTTGTTGCTGAAAATGACATTAAAAAAACTAATACCAGCACAGAACTTACAAACTGAAATTTCTCCCGTCTTTAAAAAAATCTCCTAAATGAAGAGTTTTTGGATCCATATTTTAATTGTTTTCTTTGATACTGCTAGTCGGCCTGCTCACAACACACAGACTGATCTCCTTGTCAGTCTCCAACTGATCTGTTTACCCCAAAATGTGCCTGTAAGATTCACTATTCCCAGCTGCCAGCAGGGTTTTCCCTCTCTCCTCTCTTTTACACATCCTGTTTTTAATTGTGTTCCATGACGACAGTCAATTGACCTTTCTTCTTATGCACAAGTAAATGAAGTGCACGTGAAACAACTGGCTAATATTTCTGAATTATTCCTTGACATTATATAATTGGCTTTTAAAAGGAAGATTGATAGACTTCAGAGAAGCTGGAAATTTAGCCAGATTTCAGTTAAAACCTTTGCATAACTTGTGGATACATCTGAAATGAGCAGTTTGACTTGCTAAGACATGGGATTCTTCCTAGTTTACTTATCTCCTGAGATATTTTAAGTGATGACAGCCCTTAAAGCCAAGTTTCAAAATAAACTGAACCTTAGGACACTTCAAATTGTTATGTCACAAAGTTTTCAGCCAAGAGTCACAAAAATAAACCTATCTGACCACTTCACTCTCTTTAAAAAAATGTTAGGGAGAATAGAACTATTAAATAGTTTGCAGTCACTAAATAAAATTATTTTTTAGACTTTGAACAT TCONS_00151177 r 5' 3685 TCONS_00151177 r 5' 91 EMBV3_29719 GGGAAGGGGGCTGGTGTTATTCTGTGCTACTTAACTGATTTCTGTGTGGTTCGGGGAGTG Gene BVV0102_176273 + 0 NULL GK000018.2:47228163-47237080 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13716 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08659 TATCAGACTAATGTTTGACCTCTGGAAACACTCACCATTATATTTAAGAACATGCAGGAA Variant GeneID:512336|HFE2:XM_002686082:13_cdna 101^868 1 EMBV3_34945 GeneID:512336 3 GENE HFE2 NULL hemochromatosis type 2 (juvenile) EMBV3_23565 TGGTGCCTGGTTTGGTGGATCACTGGATGGCTTTCTGCTCACCCCTATCACCATGAATGT Gene GeneID:510603|LOC510603:XM_002689105:43_cdna Constitutive 0 NULL GeneID:510603 7 GENE LOC510603 NULL similar to olfactory receptor, family 2, subfamily T, member 11 EMBV3_03576 GATGGACAGCAAAAGCCTTGGGCCTGCAACCCACCAACTGAGTAAACTGGTTTGGGAAGA Gene BVT0102_106330 + 1 EMBV3_17044 GK000011.2:98190740-98191878 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36334 GAGAAGATTCTACCTGAGACTTGTGATGGCTGAGAAATGCCACTCACTTCTGCGTAGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42438 TTCCTGTGTGAACCCCTCCCGTTCGATAGGCAAAACCAAATCCACGCAGGCATCTTAAAG Gene GeneID:507012|TACC1:XM_002698717:150_cdna Constitutive 0 NULL GeneID:507012 27 GENE TACC1 NULL transforming, acidic coiled-coil containing protein 1 EMBV3_33789 TGAGCGGCTTCATCTGCCCCAAATGCCAGAAAGAGTCTCAGATATTCCCACCAACAACAG Gene GeneID:507007|NUBP1:NM_001075295:81_cdna Constitutive 1 NULL GeneID:507007 25 GENE NUBP1 NULL nucleotide binding protein 1 (MinD homolog, E. coli) EMBV3_33326 GGTCCTATCGCCACCGCTCCTAGCCACCACTACTGTTACTGAAAAAGGACCCAGGTTTCT Gene GeneID:618136|CCDC116:NM_001038222:121_cdna Constitutive 0 NULL GeneID:618136 17 GENE CCDC116 MGC134460 coiled-coil domain containing 116 EMBV3_27181 CCCAAGAATACCAGTTTGAATCTCAGATAATGAGCCTGTCCCCCAGCCCCCACGAGGACT Gene GeneID:511478|TLE6:XM_002688949:47_cdna Constitutive 0 NULL GeneID:511478 7 GENE TLE6 NULL transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila) EMBV3_31221 ATGACAGGGGCGACAAGTGGTCTCTGCTCCTGAATGACCGGGACGAGGAGCAGGGCATCT Gene GeneID:518075|ATP7B:XM_002691794:420_cdna Constitutive 0 NULL GeneID:518075 12 GENE ATP7B NULL ATPase, Cu++ transporting, beta polypeptide EMBV3_21376 CTGAGGCTTCATAACTAATGTTTTAGAAGAGCTGTCAGGAGGATTAGACCAAATCCATTG Gene GeneID:508374|QTRTD1:NM_001098908:50_cdna Constitutive 0 NULL GeneID:508374 1 GENE QTRTD1 MGC166154 queuine tRNA-ribosyltransferase domain containing 1 EMBV3_06631 TGTACCTGGGAATATGCTTTAGCTTCGTGTTTGGGGCCCTCCTGGAATATGCAGTTGCCC Gene GeneID:517459|GABRP:NM_001015618:14_cdna UTR3_Alt 2 NULL GeneID:517459 20 GENE GABRP NULL gamma-aminobutyric acid (GABA) A receptor, pi EMBV3_00891 TCACACCAGTAGGAAGCTTGTCCTTTCCAACGTGGCCCATGCTCGCTGTCCTGTTTCAAA Gene GeneID:281977|PDE6G:NM_174421:24_cdna Constitutive 0 NULL GeneID:281977 19 GENE PDE6G NULL phosphodiesterase 6G, cGMP-specific, rod, gamma EMBV3_15379 GGCTCCAGCTCCGAGCCGCAGCAGCTTCAGCACACAGATCCACGTGGTCTCGGCCGCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06244 GACCTGGTCCGAGCCCACCCGCTTCTGGAGGCTCCGTCTCCATTCTGGGTTCTGATGATG Variant GeneID:505869|NTAN1:XM_002698033:244_cdna 82^184 2 EMBV3_18263 GeneID:505869 25 GENE NTAN1 NULL N-terminal asparagine amidase EMBV3_30722 TGACGGGAGAGTGCATTTAAGGAACCTCCTCCTGTAAAGGAGATGGAGTTTTGATAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14209 TGGCAGCATCTACAACCCTGAAGTGCTTGACATCACAGAGGAAACTCTGCATTCCCGCTT Gene GeneID:286868|RPLP0:NM_001012682:27_cdna Constitutive 11 NULL GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_23303 GACACACACATCAATGAGCTTATGGTATTGGCTGGAGCAGTTTCTGTGCTAGTGGGACCC Gene GeneID:507423|LOC507423:XM_002687133:502_cdna Constitutive 0 NULL GeneID:507423 4 GENE LOC507423 NULL similar to olfactory receptor Olr818 EMBV3_28826 CGGATGGAAATCCTGAATGGAGGAACCGCTGATCTCATTTGCTTGAGAAATCGTCCGGAG Gene BVT0102_063408 + 0 NULL GK000024.2:23121973-23166239 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141866 1 XLOC_086293 NonCoding TCONS_00141866 XLOC_086293 NonCoding NonCoding - 24:23164361-23165902 - TSS106077 1541 1 TCONS_00141866_3 86 1 0 0.000626868623007132 0.000339076634582523 0.000126109027070131 0.00057121286216222 0.000627961058191001 6.49951605642536e-05 0.000972581777575435 0.00100945594116619 0.000670738441356235 5.87403236307627e-05 2.97103791283923e-06 1.39221993485589e-05 6.70306447401104e-05 9.15767601590205e-06 0.000206945637399325 0 0 0 0.000311778666838514 0.000686008394002624 6.10692092671556e-05 0 0 0 0.00185238921794228 0.000224027914023332 0.000499986016238342 0 2.20520851646468e-05 0 XM_005223992.1 NOL4 PREDICTED: Bos taurus nucleolar protein 4 (NOL4), transcript 4e-148 529 100.00 0.189487345879299 NM_199024.2 Nol4 Mus musculus nucleolar protein 4 (Nol4), transcript variant 2, 3e-156 556 70.47 0.846852693056457 0 noncoding GCCGCCTGGCCCGCTGCTACCTCCTCCCGCCTCTAACCTGCAGCCTGCAACATGCGCACTGCCCCCGGGATCCCTAAATGGGACAATTCTGCCCGTGACGTCAGCGCCCAGCCGTCTCCACAGAAACTTTTGTCCCACTGGCCAATCAGAGAGCTTGGAAGGGGCCGGGGAAGAGGGGGGGCGGGAGGAGAGAGGAGTGGGAGGGGTGGGGGGTGAGGGGAGAGGCGAGAGGTTTAGTGTGTGGAGCTGCTCGCGCTCCGCCCGGGCTGTCAGTCCCGGCTCCAGCCGCCGCCGCGAGACCTTCCCGGAGACGCGCGCACACACAGCGCACCCCCTGCACACCCTCGCTCCCCGGCTCACACACACGCGCACACTCAGCCTGGTGGAGCAGGAGCCACTGACCGTTCTGCAAGTGCCGGGACCAGCCGCGGCGCAGTGGGGACAAACACCCCGCGTTCCTCCCAGTCGGGGCTTTCGTCTTGGAGACGGCGACGAGGGGGCGAAGGTGGGCTAGGACACGGACTCGGCGCCGGGCACTGATCGGGCCGCCTTGCTGGCAGAGCCGCCTCCTGGGACGGGCGCGGGCCTCCGCAGAGAGTAGAATAAAGAGGAGCGGCCGCGATCGCAGCGCGAGGAGGATGGGAACTCCCCTATTTCCAGCTCTGTAACAAACGGATGGAAATCCTGAATGGAGGAACCACTGATCTCATTTGCTTGAGAAATCGTCCGGAGGAACTCATATTTGGCTACTCTGAGCAGAGGAGGGGGTGTCCATGACGTGGCAGGGGGAAAATAGACATCCGAAACCTCCCGTGTGAACTGCAAACTGTAACCAAGCAAGGGGAAAATGACAGCTCGCTATATTCTAATTTCATGCAGAGGGTTTGAAGCATCTGTATCATAAACTTACTTCTATGCCTTGTACCCAGTTCATTAGAGACCAGAGGAGTCCTATCTGGGGGCCCCAACGTTATCTGGGAGACCCGCCGCCAGCGGCCTGCCTTCGTTTACCCACTTCCCCCTGGAGCGGATATCTGTTCAGGGTACCACGGGCTATCCTAGAGAACTCCGGCCAAATCTCCGTGGATGCTTTGCTAATTCTGGGACTTAACTCCCGGAACCTACCTACGGGACTGGAATTCAGCCTAAATGCATCTGAAGAAATGACATTTTAAGCCGCTTTAAAAATACCTTAAGAAATTTCCTGTGTAGCAGGATTTGATGGGCTTAACAACATGACAGGTAAGAACTTTCTCTCTTTCTAGTCCCTGAACGCCCCACACAGGGAAGGCCGAAGCGGAACGGGACCCTGGAGGAAGGAGAGCCCGGGGACCCGGGTGCCCTTCGAGCTCTCAGGCGCCAGGCCGGGCAGCTGCTTTCGAGAGAGGCGCAGCTCTCGCTCCTGGACGGTGGTGGGGCCGGAGGCCGGGAAGCTTCGGGGGCGCGCGCGCGCGGGGAGGCGGCGCTGCGCTCCACCTGCCTGCCCCGGACGCAGCCCCGGGCGAGGCGTCGAGGGACCACCCCAAGTCAATATTGGGATT TCONS_00138656 TCONS_00138657 TCONS_00138658 TCONS_00138659 TCONS_00138660 . 5' 332 TCONS_00138656 TCONS_00138657 TCONS_00138658 TCONS_00138659 TCONS_00138660 . 5' 332 EMBV3_25723 GTTCAGTAGCATTAAGTACATTCGCATTGTTGTGCAATCATTCTTGCTTTCAACAGACCG Gene BVV0102_290309 + 0 NULL GK000022.2:32506925-32534125 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26666 AGCCCTCCTAAGATCCCATATAAGGCCATTGTGCTCCCTACAGTGCTGTTTTTGACTGGC Gene GeneID:785480|LOC785480:XM_002683812:38_cdna Constitutive 0 NULL GeneID:785480 25 GENE LOC785480 NULL similar to chromosome 20 open reading frame 30 EMBV3_02493 ACGTGCGGCAAGGCTTTCAAGCAATCGTCCTACCTTGCCATCCACCGGCGCACGCACACA Gene GeneID:510613|LOC510613:XM_002695190:864_cdna Constitutive 0 NULL GeneID:510613 18 GENE LOC510613 NULL similar to Zinc finger protein 16 EMBV3_26951 ATTGCCAACAGTGAGATGAACCAAGCATCAACACGAACAGACAAACGGCCGGAAGTCCAG Gene GeneID:100137803|PRDM16:XM_002694178:627_cdna Constitutive 0 NULL GeneID:100137803 16 GENE PRDM16 NULL PR domain containing 16 EMBV3_42290 CTAGTGTTCTTCCAAAGCCTCCTAGTCACTGGATGGGAACCACCATCGAGAATTCCAACC Gene GeneID:507736|PNRC1:NM_001034308:8_cdna Constitutive 0 NULL GeneID:507736 9 GENE PNRC1 MGC127914 proline-rich nuclear receptor coactivator 1 EMBV3_21998 TAAGAGCTATGAAGAGGCAGGGTTCAAATCTCAAAGGGGAGAAAGCGAGGAGGCAAGTGC Gene GeneID:538784|LOC538784:XM_002694314:37_cdna Constitutive 0 NULL GeneID:538784 17 GENE LOC538784 NULL similar to tigger transposable element derived 4 EMBV3_13759 GAACCATGCCAGTTAACGGAAGATTTTGGTGGGAGTCTCACCTATGATCACATGGATTGG Gene BVT0102_259310 + 0 NULL GJ059944.1:1-14461 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40763 AAGCCTCGGTCCAGCGTCACCTTTCCTCACGACATCCCAGAGGTGTCTGAGGCTGCTTCT Gene BVV0101_032046 - 1 EMBV3_38195 GK000027.2:6031031-6181840 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155859 1 XLOC_094860 NonCoding TCONS_00155859 XLOC_094860 NonCoding NonCoding EBD 27:6170809-6171207 = TSS116548 398 2 TCONS_00155859_2 36 1 0 0 0 0 0 7.4429832805262e-05 0 0 0 0 0 0 0 0 0 5.15066973294954e-06 0 0 0 0 0 7.62746152617456e-06 0 0 0 0 0 0 0 0 0 XM_005199579.1 LOC101902646 PREDICTED: Bos taurus uncharacterized LOC101902646 (LOC101902646), 0.0 719 100.00 0.99748743718593 0 noncoding GAAGTGTGTCCGGCGTCGGGCGGCACCACGCAGCTTTGTGCAGAGCGCCCCAGGACCCTCTCCGTGCAGACTGCCCCAGGACCCTCCCTGCGGCCTCAGACAGCCTCCGGGGGGCGACCTCGAGCGGCCGTTCCCTCCGCGGGGAGCAGGACCACACCGAGGTCAGGAGGACTGAGCCCCGGCTGGATGCAAAGCTGGGGCCCGCCAGCGCGCGTGTCCCGTCCCGCAGCCCCCTCGCTCGCTCAGAAGCAGCCTCAGACACCTCTGGGATGTCGTGTGGAAAGATGACGCTGGACCGAGGCTTTGGACCCGGGCTCCGGTCCCGGCTCCGCCTCCGACTACAGGTCACGTCCCTTCGCGCAGTCTCCGCGCCCTCGTAGGCGAGATGCCACAGCTGG EMBV3_18277 ACAGTTCCAAGTGTAGACAGGTGCCCTTAAGAGAGCCAAAAACATGGCGGGCGGAGTGTA Gene GeneID:505512|SAE1:NM_001081711:127_cdna Constitutive 2 NULL GeneID:505512 18 GENE SAE1 MGC151535 SUMO1 activating enzyme subunit 1 EMBV3_21921 TCTCATTAGAGCTCCCCTCTGGAAGGCAGGGGATGGAGAGTGTTCAGGTATTAGACGGGA Gene GeneID:614548|GADL1:NM_001102281:214_cdna UTR3_Alt 2 NULL GeneID:614548 22 GENE GADL1 MGC157360 glutamate decarboxylase-like 1 EMBV3_10777 GGCTTGTGTTTTAGACTTCGGTGTAGGTTTTTACAACCATGCCAGAACCAGCGAAGTCCG Gene GeneID:616627|HIST1H2BK:NM_001078063:149_cdna Constitutive 0 NULL GeneID:616627 23 GENE HIST1H2BK NULL H2B histone family, member T EMBV3_25637 CCCTCTGTGCTCGTCTTCTCATCTCTGTAATTGGCTTCCTTGGTGGTTCACATGGTAGAG Gene BVT0102_120513 - 0 NULL GK000021.2:16960420-17361495 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120610 1 XLOC_073207 Coding TCONS_00120610 XLOC_073207 NonCoding Coding - 21:17029348-17033896 - TSS90045 437 1 TCONS_00120610_1 57 0.459954233409611 3 0.904552452166263 0.000871760022765734 2.29940453084495e-05 0.000254113708814134 0.00013301838084748 0 8.18550646262523e-06 0.000112449064737285 0 1.80552878779896e-05 0 0 0 0 0 0 0 0 0 0 0 3.10319785673532e-57 0 0 0 2.02916984586578e-18 0 0.000335190948215895 0 0 0 0 noncoding AGGGAAGATGGTTCTCTGGGACGCTGGTCTGCTGTCCTCTCAGTCAGCTGGGCTTTCCCCGTAAAGTCACTGTGGCTCGCTCCAGTAACTCGGCTCTCGGTTTACCAGCCTGACACAGCGAGCGGTAGGAGCGTGGGCTCGTGATAAGCTGGGACAGACTCCCAGTGTAAACGAGGAGCAAGCCAGCTTTTAAACCCCATCCCTCCCCTCCCCTTCCGCTGGGCATTCCAGGTCAGGACTCGGCCGACTCCTCTGTGAGTGGCTTCATGGCGGACAAGCCGTGGAATCTTCTGGAAGGACGGGCGGATTCTCTACCATGTGAACCACCAAGGAAGCCCATTACAGAGATGAGAAGACGAGCACAGAGGGAGAAGGTCACTTCCCTTCTACACAAGCTGACTCTGGAGCCAGGACTTATGCTGAGCTTTCCCACGAGC TCONS_00120603 s 5' 33149 TCONS_00120603 s 5' 33238 EMBV3_08694 GCCCTCTTCTCTTTCAGAGTAAAGTGGTTGACCACCGGCGACACTCAGACCTCCTCAGGA Variant GeneID:513550|FAM18B:NM_001046152:24_cdna 469^597 3 EMBV3_03193 GeneID:513550 19 GENE FAM18B MGC137873 family with sequence similarity 18, member B EMBV3_10623 TCTGCTGCGGCGGGAGAGGTGGTCGTGGAAGACATCAATGCAAGCCTGAATAAGAAAAGG Variant GeneID:613479|GTF2A2:NM_001037619:121_cdna 51^123 2 EMBV3_34824 GeneID:613479 10 GENE GTF2A2 MGC133516 general transcription factor IIA, 2, 12kDa EMBV3_35792 AAATACCAGAACTACACAGATGCCGTGACAGGAGCAGATGGCTTGGCGGTGGTAGGTGTA Gene GeneID:515359|CA5A:XM_002694761:527_cdna Constitutive 0 NULL GeneID:515359 18 GENE CA5A NULL carbonic anhydrase VA, mitochondrial EMBV3_01686 GGGAAGTGCCGTTTTTCTCTGTGCTTCTCTTTGCTCGGGATACGTCAAGTGACCCTGGTC Gene GeneID:508963|LOC508963:NM_001100328:11_cdna UTR3_Alt 2 NULL GeneID:508963 20 GENE LOC508963 NULL hypothetical LOC508963 EMBV3_41443 ACCTGCAAGTGTTTGCTCTCCTGCCATTTCCATGTTGGGCATCTCTGGGCCTTCAAAGGT Gene GeneID:783680|B2M:XM_002691119:53_cdna Constitutive 0 NULL GeneID:783680 10 GENE B2M NULL beta-2-microglobulin EMBV3_38733 GTTTGGCCGTTGGAACAGTTCTTCTAATTGTATTTCCTGGCAGAAGGAATTGTCAGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33473 AAGGAAGAAAGTGGAGGAGGAAGAGCGGCAGAAGGAGCTGGAAGAGATTTACATGTTGCC Gene BVV0102_028822 + 0 NULL GK000021.2:14420463-14484198 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120534 TCONS_00120537 TCONS_00120526 TCONS_00120533 TCONS_00120524 TCONS_00120535 TCONS_00120546 TCONS_00120532 TCONS_00120529 TCONS_00120523 TCONS_00120542 TCONS_00120530 TCONS_00120536 TCONS_00120528 TCONS_00120540 TCONS_00120538 TCONS_00120527 TCONS_00120531 TCONS_00120525 TCONS_00120539 TCONS_00120544 TCONS_00120541 1 XLOC_073195 Coding TCONS_00120544 XLOC_073195 Coding Coding LOC100847962 21:14405457-14505342 j TSS90006 5566 1 TCONS_00120544_7 1277 38 0.944655800728845 0.0016923972825889 0.00107278243916518 0.00153916161521974 0.000751618735621112 0.000993128835802761 0.000431036378839571 0.000863454628977122 0.00148378084822097 0.00120451015836853 0.00264109890954239 0.000882422789034506 0.00131470768322518 0.000475810808186815 0.00188849867399138 0.00194836016754301 0.0104366503439287 0.00162805614861972 5.32696394092346e-05 0.00154311130421539 0.00160404259091652 0.000291626331939772 0.000528216879837702 0.000823673005877957 0.000897011051472027 0.000897148370613998 0.002103377031254 0.00122100916276666 0.000849115837505405 0.000520630204905468 0.000646957190472127 XM_005196226.1 LOC100847962 PREDICTED: Bos taurus chromodomain-helicase-DNA-binding protein 2-like (LOC100847962), transcript variant X2, mRNA. 0.0 3656 100.00 0.36399568810636 XR_243201.1 CHD2 PREDICTED: Homo sapiens chromodomain helicase DNA binding protein 2 (CHD2), transcript variant X6, misc_RNA. 0.0 5496 92.76 0.669241825368308 TCONS_00120544_7 sp|O14647|CHD2_HUMAN CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2; 0.0 2343 95.91 0.985904463586531 4 coding 0 0 1 1 -0.0850547371711712 0.463452733497638 0.0143274917209314 0.788716189168764 GTAAATGTAGAGAGTGTCAATCAAAGGCAGAGCTCAGAGCTGGGAAGGAGGCTCTAGATGGCGGCTGTGCCTTAGAGAGAGCGCGCTCAGCTCCCTGCCTTCGCCTCACTTTACGCAACTTTCCCTAACTTTCGGGCAGCCTCAGGGGGCCCCCGCAGCCCCCTGCCTCTCCTAGTGACTTACTGGGGTCGATTCGAACCTTTTTTAGGGAGAAAAGCAGCTTTTGGGAGCTTTCTTTTCGTGCCTTGTTGGAAAGAAGCAGCCGTACTGAGAGCCCAGGTCGTTGTTTTTTCCAGCTTAGAAGCCATGGCGCACCTCCATTTTTGTGCGCTCTCCTAATGAGGTTTTTTTTCTTCCGGACCCGTTTCAGGATTAATTGTTGCTTTATTTTTTTGAACAGTTAACATATTTGAGGATTATATTATTTATTTTTTGCTTTTTAGCGGAGAATTTTGTTTTTATTTTTAATTATTTGGGATCTGATATTTTTCTACTACTAGATAGGACTCTTGCTTTGGACCTACTACATGGATCAGTAAATACCTGGGCACAGGACTTCAAAGCAAACACAGATTCCCCCTCCCCCTTAATATTTAAGACTTAAAAGATGATGAGAAATAAGGACAAAAGCCAAGAGGAGGACAGTTCGCTACACAGCAATGCATCGAGTCATTCAGCATCTGAAGAAGCTTCGGGTTCAGACTCAGGCAGCCAGTCGGAGAGTGAGCAGGGCAGCGATCCAGGAAGTGGCCATGGCAGTGAGTCAAATAGTAGTTCTGAATCTTCGGAGAGTCAGTCGGAATCTGAGAGTGAATCGGCAGGTTCCAAGTCCCAGCCAGTTCTTCCAGAAGCCAAAGAGAAACCAGCCTCTAAGAAGGAACGGATAGCTGATGTGAAGAAGATGTGGGAAGAATATCCTGATGTTTATGGGGTCAGGCGGTCAAACCGAAGCAGACAAGAACCATCACGATTTAATATTAAGGAGGAGGCAAGTAGCGGGTCTGAGAGTGGGAGCCCAAAGAGAAGAGGCCAGAGGCAGCTGAAAAAACAAACAGTGCCCAAACCTCGTGTTAAAAAGCAACCTAAGACTCAGCGTGGAAAGAGGAAAAAGCAAGACTCTTCTGATGATGAGGATGAAGATGATGAAGCTCCCAAAAGGCAGACACGCCGCAGAGCAGCTAAAAATGTGAGTTATAAAGAAGACGATGACTTTGAGACTGACTCAGATGACCTCATTGAAATGACTGGAGAAGGAGTTGATGAACAGCAGGATAATAGTGAAACTATTGAAAAGGTCTTAGATTCAAGGCTGGGAAAGAAAGGAGCCACGGGAGCTTCTACCACTGTGTATGCAGTCGAAGCTAATGGAGACCCTAGCAGCGACTTTGACCCTGAAAAGGATGAAGGCGAAGTCCAGTACCTCATCAAGTGGAAGGGCTGGTCATATATCCACAGCACATGGGAGAGTGAAGAGTCCTTACAGCAACAGAAAGTGAAGGGTCTGAAAAAACTAGAGAACTTCAAGAAGAAAGAGGATGAAATCAAGCAGTGGTTAGGGAAGGTTTCTCCTGAAGATGTGGAATATTTCAACTGCCAACAAGAGCTGGCCTCGGAGCTGAACAAACAGTATCAGATCGTAGAAAGAGTAATAGCTGTGAAGACAAGCAAATCTACACTGGGTCAAACAGACTTTCCAGCTCACAGCCGGAAGCCGGCCCCTTCCAACGAACCTGAGTATCTATGCAAGTGGATGGGACTGCCCTATTCAGAGTGCAGCTGGGAAGACGAAGCCCTGATCGGAAAGAAATTCCAGAGCTGCATCGACAGCTTCCACAGTCGCAACAACTCAAAAACCATCCCCACGAGAGAATGCAAGGCCCTGAAGCAGAGACCACGATTTGTGGCTTTAAAGAAACAGCCGGCATATTTAGGAGGAGAGAATCTGGAGCTCCGAGATTATCAGCTGGAAGGTCTCAACTGGCTTGCTCACTCCTGGTGCAAAAGTAACAGTGTAATCCTTGCTGATGAAATGGGCCTAGGAAAGACCATCCAGACCATATCATTCCTCTCCTACCTGTTCCACCAACACCAGCTGTATGGCCCCTTTCTTATAGTCGTCCCTTTATCCACCCTCACCTCATGGCAGAGGGAGTTTGAAATCTGGGCACCAGAGATTAACGTAGTGGTTTACATAGGTGACCTGATGAGCAGAAATACGATACGAGAATATGAATGGATTCACTCTCAGACCAAAAGGCTAAAGTTCAATGCGCTTATAACAACATATGAGATCCTCTTAAAAGATAAGACTGTGCTGGGCAGTATTAACTGGGCCTTTCTGGGAGTGGATGAAGCCCATCGGTTGAAGAATGATGACTCTTTATTGTATAAAACTCTGATTGATTTCAAGTCCAACCATAGGCTCCTGATTACGGGGACCCCTCTTCAGAATTCCCTCAAAGAGCTCTGGTCCTTGCTGCACTTTATTATGCCGGAGAAGTTTGAGTTCTGGGAAGATTTTGAAGAAGACCATGGGAAAGGGAGAGAGAATGGCTATCAGAGTCTTCATAAGGTGCTAGAGCCTTTCCTTCTCCGAAGAGTGAAGAAAGATGTGGAGAAATCTCTTCCTGCCAAAGTGGAACAGATTCTCAGAGTGGAGATGTCAGCCCTTCAGAAACAGTATTACAAATGGATTCTGACCAGGAATTACAAGGCTCTCGCCAAAGGAACAAGAGGAAGCACATCTGGCTTCCTTAATATTGTGATGGAACTGAAGAAATGCTGCAACCACTGTCACCTGATTAAGCCCCCTGAGGAAAACGAAAGGGAAAATGGACAGGAAGTTCTTCTGTCCCTGATCAGGAGCAGTGGGAAGCTGATTCTATTAGATAAACTGTTGACAAGACTTCGAGAAAGAGGAAACAGAGTCCTTATCTTCTCTCAGATGGTGAGGATGTTGGATATCCTGGCTGAGTACCTGACTATTAAGCACTACCCTTTCCAGCGTCTGGATGGTTCCATCAAGGGAGAAATCCGAAAACAGGCGCTGGACCACTTCAACGCAGATGGGTCTGAGGACTTCTGTTTCCTGCTCTCGACAAGGGCTGGTGGCCTGGGAATCAATTTGGCTTCAGCGGACACAGTTGTCATCTTTGACTCTGACTGGAACCCCCAGAACGACTTGCAGGCACAAGCCCGAGCCCACAGAATTGGTCAGAAGAAGCAGGTAAATATTTACCGCTTGGTTACAAAGGGGACCGTGGAGGAAGAGATCATAGAACGGGCCAAGAAGAAGATGGTATTGGACCACCTGGTGATTCAGCGCATGGATACCACTGGCCGAACGGTTCTGGAAAACAACTCTGGGAGGTCCAATTCAAATCCTTTTAATAAAGAAGAGCTGACGGCGATTTTGAAATTTGGAGCAGAGGATCTCTTCAAAGAGCTTGAAGGGGAAGAATCAGAGCCTCAGGAAATGGATATAGATGAAATTTTGCGCTTGGCTGAAACCAGAGAGAATGAAGTCTCAACAAGTGCAACAGATGAACTTCTGTCACAATTTAAGGTTGCCAACTTTGCAACGATGGAGGATGAAGAAGAGCTTGACGAGCGTCCTCACAAGGACTGGGATGAGATCATCCCAGAGGAGCAAAGGAAGAAAGTGGAGGAGGAAGAGCGGCAGAAGGAGCTGGAAGAGATTTACATGTTGCCTCGAATTCGGAGTTCCACTAAAAAGGCTCAGACAAATGACAGTGACTCTGATACTGAGTCCAAGAGACAGGCCCAGAGGTCCTCTGCCTCTGAGAGTGAGACGGATGACTCTGATGACGACAAGAAGCCCAAGCGCAGAGGGCGTCCCCGAAGTGTGCGGAAGGACCTGGTGGAGGGGTTCACAGACGCCGAGATCCGGAGGTTCATCAAGGCATATAAGAAGTTTGGTCTCCCTCTTGAACGGCTGGAGTGCATCGCACGTGATGCTGAGCTGGTAGATAAGTCTGTGGCGGATCTGAAGCGCTTGGGGGAACTGATTCACAACAGCTGTGTGTCAGCAATGCAGGAATATGAAGAGCAGCTGAAAGAAAATGCCAGCGAGGGGAAAGGACCAGGGAAAAAGAGAGGCCCAACTATCAAGATATCTGGGGTTCAGGTTAATGTGAAATCTATTATCCAACATGAAGAAGAGTTTGAGATGCTGCATAAATCTATCCCTGTAGACCCTGAAGAAAAAAAAAAATATTGCTTATCCTGTCGTGTCAAGGCTGCACATTTTGATGTTGAGTGGGGAGTAGAGGATGACTCTCGTTTATTGCTGGGAATTTATGAACATGGCTATGGAAACTGGGAGCTAATTAAAACGGACCCAGAGCTTAAGTTAACTGACAAACTCCAGGGATTCCCTGCTCCTGGAAGGAGGAAATCCACGACGGCTGGGATGCTCTAGCAGATGAAGCCAACAAGCCCCTCCTACCTGAGTTGTTCTACCCTGTTAACAGCACAATTCTGCCCGTGGAGACAGATAAAAAGCCCCAGGGGAAGCAGCTGCAGACCCGAGCAGACTACTTGCTGAAGCTGCTCAGGAAGAGTCTGGAGAAGGAGGGCGCTGTGACGGGCGGGGAAGAGGCCAAATTAACGAAGCGGAAGCCTCGAGTGAAAAAGGAAAACAAAGCACCGAGCTGAAGGACGAGCATGGAATTGAGTTTTCATCTCCTCGACACTCAGACAATCCATCAGAAGAGGGAGAAGTAAAGGATGATGGCTTAGAAAAAAGTCCAACGAAAAAGAAACAGAAGAAGAAAGAGAACAAGGAGAACAAGGAAAAACAAATGAGTTCTAGGAAAGACAAGGAAGGGGACAAGGAAAGGAAGAGGTCGAAAGACAAGAAAGAGAAGCCTAAAGGTGGTGATGCCAAATCTTCAAGTAAATCCAAGCGCTCTCAGGGCCCTGTCCATATCACAGCAGGAAGCGAACCCGTCCCCATTGGAGAGGATGAGGAGGATGATCTGGACCAGGAGACGTTCAGCATATGTAAGGAGCGGATGCGGCCCGTGAAGAAGGCGCTGAAGCAGCTGGACAAGCCTGACAAGGGGCTCAGCGTCCAGGAGCAGCTGGAGCACACGCGGAGCTGCCTGCTGAAGATCGGGGACCGGATAGCCGAGTGCCTGAAAGCTTACTCAGACCAGGAGCACACCAAGCTGTGGAGGAGGAACCTATGGATTTTTGTCTCCAAGTTTACAGAATTTGATGCTCGAAAATTGCACAAGTTGTACAAGATGGCTCATAAGAAAAGATCTCAAGAAGAAGAGGAGCAGAAGAAGAAAGAGGATGTGATTGGTGGTAAGAAACCATTTCGACCAGAGGCCTCAGGTTCCAGCCGTGACTCCCTGATGTCTCAGCCCCACACCCCGCACAACCTTCACCCACAGAAGCCTCACTTGCCTGCCTCTCATGGCCCACAGATGCATGGACACCCAAGAGACAACTACAGTCACCCCAACAAGAGACACTTCAGTAATGCAGTGAAATAATACACGAAATAAAGATCCAAAAGGCTTAATTCAACTGTAGG EMBV3_06996 GAAGAGAGAGACGTCTCCGATGGGATTCAGTGTGATAGTTCTTGACAGGTGGTGTAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03910 CATCTGGGCTGTAGGTTGGGTTATGGCAGGAAAAGAAGGCAAGCCTGCATACACACCATT Gene BVT0102_354213 + 0 NULL GK000011.2:50453413-50878659 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32430 GTGTATTGGTAGGGTTCTGAGCTCTTTCTACACCACATCAATCTTAGGCCCAGAGTTAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35924 CCTTGATGTTTGTAACCCCTTCGTATTCTGGAATGATGTTGGGATCAGAAGAGTGATACC Gene GeneID:613665|LEPROT:NM_001034741:58_cdna Constitutive 0 NULL GeneID:613665 3 GENE LEPROT MGC127672 leptin receptor overlapping transcript EMBV3_08758 TCCTTGCATTCACAGTGTCCATCATAGCTCTCTCTTACATCTGCATCCTCAACACCATCC Gene GeneID:538744|LOC538744:XM_002693072:394_cdna Constitutive 0 NULL GeneID:538744 15 GENE LOC538744 NULL similar to olfactory receptor MOR204-11 EMBV3_07928 GAAGTTCCAGATTCTTCCATTTTGAAAAAGAATGTACCTGAAGCATGGGAGTCCAGTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39911 AGCTGTGGATTCTGGCAAATGGTCCTTGTGCCCTTCCCCAATTCTTACCTAATCTGACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05131 GCACCCAGTAGAACTGAAGCCGTTCCAGGATTATCGAAAACTGAATAGCAACCTTGGGGG Gene GeneID:538553|BAT2:XM_002697370:375_cdna Constitutive 0 NULL GeneID:538553 23 GENE BAT2 NULL HLA-B associated transcript 2 EMBV3_18010 CAGATAAAGGCCACCGTGAAACGAAAGGTATATGAAGACTCTGGTATCCCCCTTCCAGCC Gene GeneID:512885|C19H17orf49:NM_001038092:90_cdna Constitutive 1 NULL GeneID:512885 19 GENE C19H17orf49 C17orf49 MGC134279 chromosome 17 open reading frame 49 ortholog EMBV3_01465 TGAGTTTCATTTGAGACCCCCACTCCTTTTTGTGGCTGAATGCTGTGTGCTGTCCAGAGG Gene BVT0102_126413 + 0 NULL GK000030.2:53705779-53871712 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16178 CGAAGTAAAGGGGCGACTTTGTGTCCACCATAGGAGAGAATTCGATGTGAGAGTAAGGAG Gene BVV0102_241414 + 0 NULL GK000012.2:23026893-23233219 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034883 1 XLOC_020771 Coding TCONS_00034883 XLOC_020771 Coding Coding LHFP 12:22817677-23053617 j TSS25665 2112 1 TCONS_00034883_3 200 4 0.991065487265776 0 3.42961963336039e-05 4.38162181217044e-06 0 1.67363642613899e-05 0 0 0 3.05474189392949e-05 2.31771227350092e-14 9.82740962006449e-06 0 3.97992659945261e-17 0 5.97602283193295e-07 0.00644896398310912 0.0023937578047208 0.00157011856649195 0 2.72402529612698e-05 1.43737064846804e-06 0.0019177009633292 0.000893040422329588 0.00060594324794339 0 0 0 0.00019401232220431 5.51047134628851e-05 0.00141133857658793 XM_005213639.1 LHFP PREDICTED: Bos taurus lipoma HMGIC fusion partner (LHFP), 0.0 3802 100.00 0.997632575757576 NM_005780.2 LHFP Homo sapiens lipoma HMGIC fusion partner (LHFP), mRNA. 0.0 2071 81.37 0.993371212121212 TCONS_00034883_3 sp|Q9Y693|LHFP_HUMAN LHFP_HUMAN Lipoma HMGIC fusion partner; 2e-127 362 97.50 0.995 2 coding 0 0 0 0 0.0166585929141274 0.901352532051642 0.00356990521861779 0.956764135244137 AGGCAGATCAGATCGGCTCCTCCGCCCGTGAGCTCCGGCGCCCCGCGCGCCGCCCCAGCGCTCCGCCCGAGCCGCCGCCGGAGAGCCCGAGCTGCGCGGGCTGCCCGGGCGCGGCGCCGCGCGTCCTCCCGAAGACCTCCGCCCCCTGCCGGCCCCTGCGCACCCCTCCCGCGGCCAGCCCCGGAGGCTCCGCGGCTGTCGCGGACCGCGGCGAAGAAGGAAGGACCGTCCGGCGCGCCGTGGATGCTCCGCCGGAGAGAGACAGCAAGTTGTGAGTGCGCCCCGGCCCCAGGAGGGAGGGCGGCCGCCGCCCGCCAGCCATGGATCAGCATCCTTACTGCAGAGAATGGGAAGTTGATGTCCAGTAAGACTGAAGATCCGTTCTGTTAGTAGCCACTCTCCCATCACAGAACTGTGGATTACCTGCGGGGAGCCGGTAGTTTGACGGCCTTTACTTCTTCCTGCAGACCCCGAACAGTTACTTTGGGTCCTCCTTGCCCTGTCAGGTGAAAGATGGCATCCAGTCTGACTTGCACCGGGGTCATCTGGGCGCTGCTCTCGTTTCTCTGTGCAGCCACCTCCTGCGTGGGGTTCTTCATGCCTTACTGGCTCTGGGGATCACAGCTGGGCAAGCCCGTGTCCTTCGGCACTTTCCGGAGGTGCTCGTATCCTGTGCACGATGAGAGTCGGCAGATGATGGTGATGGTTGAGGAGTGTGGGCGCTATGCCTCTTTCCAGGGCATTCCCAGCGCGGAATGGAGAATCTGTACCATCGTGACCGGCCTGGGCTGTGGCCTGCTCCTCCTGGTGGCGCTCACTGCCCTCATGGGCTGCTGCGTGTCGGAGCTCATCTCCCGGACTGTAGGAAGAGTGGCCGGAGGAATTCAGTTTCTGGGGGGCTTGTTGATCGGTGCTGGCTGCGCCCTCTACCCTCTGGGCTGGGACAGTGAGGAAGTCCGGCAGACTTGTGGCTACATTTCTGGCCAATTCGATCTGGGTAAGTGTGAAATCGGCTGGGCCTACTACTGCACAGGAGGAGGGGCTGCTGCCGCCATGCTGCTCTGCACATGGCTGGCTTGCTTCTCAGGCAAGAAACAGAAGCAGTACCCATACTGAGATGGAGCCGCCAAGCGCAGACAGAGGAGAACAAGGGCCACAGGGACCCCGAGGGACCGAAGCATCCAGCTACTCTCAGAAGGCGGAGGAGTGCTTCTAAACCATACGATGCAGATGAAATGAAACCCAAAGGAATCAGAAACATCTTACCACACGGAAGGGTTGTGCAGGACTTGCAAAAGCAATGTAGAGCATGGAATGATACAGAAAAATGGACCAAAGGCTAAAAATATTGCAGGGTGTTGGGTGTTTCTATTCCAGAGTATTGTTGATGTAGAACACATACACACACAGAACAAATCTATATATGCAAACAAGGTTTTTGGTTTTTTTTAGGATGATGACTCAGAGATCAAAAGGGCTAGTAGAAACAGTATTATGTTAGGAAGCAGGGTAACCCAAAAAGGTTCCCTGTAAGTCATGGCACTTTTGAAAGCACACAAGCATATACAGACATACCCATGCAATCACATGCCCAAACGCAGACATTTCCGTGGTTGCACAGACTGTACAAGATGTTTAGTGGTGCATTACTCCTCTGTTTTCTTTTTAATACACATTTAAAATACAGTATTATCACTTTGTAAAGCATACATTAAACCTAATCAATGGACCAATAAGCCACTTTATCAGTATTTTGTATACCCTGCATAAACTCTTTACGCCCTCAACCTGTTTTCAGTGTTTATGCAGACCTTTAGAATTAAGCCTTTGTATTTCAATATTATTCCAAAAATATGCAATATTTCTCTGAGTAGTTTCTGCTGTGATATTCTTACGAAGTAAAGGGGCGACTTTGTGTCCACCATAGGAGAGAATTCGATGTGAGAGTAAGGAGAGACATTCTCCAGTCATTAGATCTTGTTTTCTTTCGTCCATTATTGTACTATGCTGTACCACATTTATTCCAATATTCATTTTGTAAAAAGTAAAAAGTGCTATTTTGTTTGTATTTGAAAAGCTCTGTGAATAAATTTTCTCTTTGATCAATAGCTC EMBV3_20025 CTCTCTCGCCAGGAAACCCACCAACAGCTGGCTGATAAGAAGAGTCTCCATGTTGTGGAA Gene GeneID:512469|MRPS5:NM_001046123:53_cdna Constitutive 0 NULL GeneID:512469 11 GENE MRPS5 MGC137513 mitochondrial ribosomal protein S5 EMBV3_43720 ATTGCAAAATGCACAGGGCATCATTACTGTAGAGTTATTGTAAGATGGGATAAGGGTGCC Gene GeneID:522828|GPC5:NM_001102070:32_cdna UTR3_Alt 2 NULL GeneID:522828 12 GENE GPC5 MGC166256 glypican 5 EMBV3_41037 GGGGGATGGAGCAGGAAGAAGACTTATATTTTGACGCAATTAGGTTCCAAACATATCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15106 GAGGCCAGCCATGCAGCAACTGTGGGCATGAGTATGGTCCTGTATTTTCTACGCCTTCTT Gene BVV0101_029003 + 0 NULL GK000009.2:86197841-86364224 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07721 TAAATCAGGACTTAACCTCCAGCGGACAAAGCACCAGCAGCTCATCGGCTCTTTCTACTC Gene GeneID:790884|MLLT10:XM_002692123:38_cdna Constitutive 1 NULL GeneID:790884 13 GENE MLLT10 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 EMBV3_32318 ACTACCTAAATGAGAGTTCTGGGGAAGAGTGGGATTCCTCTGAAGAAGAGGACCCTGTGG Gene GeneID:777600|DCAF16:NM_001078147:3_cdna Constitutive 0 NULL GeneID:777600 6 GENE DCAF16 C4orf30 C6H4orf30 MGC138037 DDB1 and CUL4 associated factor 16 EMBV3_22901 AGAACCAGAAGTGATTCCAGACCCAGCCAAGCAGACTGACAGAGTAGTGAAAATCGCAGG Gene GeneID:509657|PTPRK:XM_002690216:2_cdna Constitutive 0 NULL GeneID:509657 9 GENE PTPRK NULL protein tyrosine phosphatase, receptor type, K EMBV3_36532 ACACGCAGGTTTCAGGGTTTACTTGAGTTACTGCTGTATTAGATTGGATCCTTTACTGCC Gene GeneID:504467|SASS6:XM_002686171:331_cdna Constitutive 0 NULL GeneID:504467 3 GENE SASS6 NULL spindle assembly 6 homolog (C. elegans) EMBV3_33008 CATCTGTAGGGTCAGGATGTTGGGCAAAATACTTTTACTGTCTGTTCTGTCTATGCCTTC Gene GeneID:509871|NMD3:NM_001075420:121_cdna Constitutive 3 NULL GeneID:509871 1 GENE NMD3 MGC142487 NMD3 homolog (S. cerevisiae) EMBV3_14457 CGAAAGGAAGCTGCTGGAAATAAAAACAGAAATGGTGTCACTGCACGCCCAGCAGGATCG Gene GeneID:617129|CCDC90A:NM_001102309:155_cdna Constitutive 0 NULL GeneID:617129 23 GENE CCDC90A MGC140084 coiled-coil domain containing 90A EMBV3_15673 TGGAAGGACTACTTCAACCTGAGCCAAGTGGTGCTGGCACTGATCCAGAGTCGGGGGCAA Gene GeneID:100299090|LOC100299090:XM_002695099:554_cdna Constitutive 0 NULL GeneID:100299090 18 GENE LOC100299090 NULL similar to nanos EMBV3_40145 AGTCAGCCCATAATTCTTTTAGTTGAGCCTCTTTTGAGCACCAGTGGAATATGGACACAC Gene BVV0102_385406 + 0 NULL GK000019.2:27532635-27543282 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34359 TCATCTATGAGGAGACCCGTGGGGTGCTGAAGGTGTTCCTGGAAAATGTGATTCGGGACG Gene GeneID:517481|LOC517481:XM_002697463:89_cdna Constitutive 0 NULL GeneID:517481 23 GENE LOC517481 NULL similar to Histone H4 replacement CG3379-PC EMBV3_17172 AGATGTGCAGCAAGGACAGAATAAATCTAGCAAATTATTTTCCACCATCTGAAATAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27854 CAGAGTGTGGCAAGGTCTTCAGCCGCAGCTGCAACCTGCTGCGGCATATGCTGGTGCACA Gene GeneID:538853|ZSCAN10:XM_002697943:626_cdna Constitutive 0 NULL GeneID:538853 25 GENE ZSCAN10 NULL zinc finger and SCAN domain containing 10 EMBV3_28386 GTTACTATCGGTATTACAACAAGTACGTGAACGTGTTTTTAAACTACTGCCGCTCTTATA Variant GeneID:506492|ATP5J2:NM_001113719:104_cdna 163^210 2 EMBV3_43057 GeneID:506492 25 GENE ATP5J2 MGC133672 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 EMBV3_32892 GGCGCTGTCTCTCAGGGTCCCCACCCTCAGGGGAACTTTTGGAAGAGTCCCAGATGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23624 TGGCTGAACTGGTGGTTTTGGGCAATGCTCTCAGGTCTACAGACATACAATGTGCCTGAC Gene BVV0101_060832 + 0 NULL GK000008.2:8405959-8437127 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16806 TTCAACCTGGCGGTCATGGTCATCTACCCGACCGTCATCGCGCCGCTCTTCAACAAGTTC Gene GeneID:100300375|LOC100300375:XM_002683900:2_cdna Constitutive 0 NULL GeneID:100300375 Un GENE LOC100300375 NULL similar to zinc metallopeptidase STE24 EMBV3_24160 TGCCTTGAGGCCGAACTAGCCAGCTCTCACCCATGCCCAGAAATGATTCACTGCCAAATT Gene GeneID:512869|RNF213:XM_002707766:305_cdna UTR3_Alt 2 NULL GeneID:512869 19 GENE RNF213 NULL ring finger protein 213 EMBV3_42316 CACCGAGTGCAGCCTCCTGCAGGGGGACGAATGAGTGACGGCTTGCTCTTTGATACCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13275 ATAAGCGCCCCAAACGTCCCAGAACCATCTTGACAACCCAGCAGAGGAGAGCATTCAAGG Gene GeneID:510296|LMX1A:XM_002685832:57_cdna Constitutive 0 NULL GeneID:510296 3 GENE LMX1A NULL LIM homeobox transcription factor 1, alpha EMBV3_02248 TCCCTTTGACTAAGGTGTATGTTGTTGAAGAATAAGAAACAAGGATGTAAAAACGAGGAG Variant GeneID:538104|ZMPSTE24:XM_002686457:481_cdna 770^954 1 EMBV3_07681 GeneID:538104 3 GENE ZMPSTE24 NULL zinc metallopeptidase (STE24 homolog, S. cerevisiae) EMBV3_40726 AGCTGCAGATCCAGAGCTTCGAGAACGACCTCTCAGAGCTCCGCGCCGACAAGCAGAACT Gene GeneID:518914|LAMC3:XM_002691608:239_cdna Constitutive 0 NULL GeneID:518914 11 GENE LAMC3 NULL laminin, gamma 3 EMBV3_36146 GGTGACATCCATCAGCTTTCACCCTTCACTTCCGCTGCTGAGCTTGGCTGTACAAACTTG Gene GeneID:506766|MAP7:NM_001101874:14_cdna UTR3_Alt 3 NULL GeneID:506766 9 GENE MAP7 MGC151537 microtubule-associated protein 7 EMBV3_40911 AGGATTAAAGAAAGACAGGTCTCTAACAGACATAACTCAACCCAAGTCACCAAGGCAGTG Gene BVT0102_191552 - 1 EMBV3_30553 GK000029.2:27222076-27234897 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00274 GGTCCTAACCTCATGGGGAGTTGGAAAGAGGCAAAATAATGTTTAATCGAGACATCAAGG Gene BVV0102_123210 + 0 NULL GK000003.2:10246804-10295276 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42797 ACTTTGTAATCCGGATCCAGGATGGAACTGGTGGGTAAAACAGGAATCTGAGATTTCCAA Variant GeneID:504449|NECAP1:NM_001034211:25_cdna 310^391 1 EMBV3_12339 GeneID:504449 5 GENE NECAP1 MGC127577 NECAP endocytosis associated 1 EMBV3_13558 AAGAGGTGCGAGTGCTCACACTGCCCCTGCAGGCCACCACGGTGGGCCAGATGGGCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20912 GCTTCTCTTCCTGTCGGTGGGCATCTCCATCTTTTCTGTGCTTATCTACTCCGTGGAGAA Gene GeneID:541460|KCNS3:NM_001013606:204_cdna Constitutive 0 NULL GeneID:541460 11 GENE KCNS3 NULL potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 EMBV3_30611 TGGCCTTATTTTGCTCCTCTGAAGGTAATCCAGACCTTTCCCCTGAGGGAAGAGGGAAAC Gene BVV0102_184615 + 0 NULL GK000021.2:49619865-49665665 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15697 GGGTCCTACAGAGATAGCTACGACAGTTATGCTACACACAACGAGTAAAAATCCTTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21156 TGTTCACAGAGTTATACAGAGAAGATAAGAGGGAGGAAGGAGACAGAGGTGGCCAGGAGG Gene BVV0102_324455 + 1 EMBV3_00653 GK000009.2:3952725-4365166 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009748 TCONS_00218178 TCONS_00253025 TCONS_00238445 TCONS_00156845 TCONS_00250197 TCONS_00006966 TCONS_00207277 TCONS_00231502 TCONS_00249921 TCONS_00250503 TCONS_00148465 TCONS_00251760 TCONS_00210508 TCONS_00209829 TCONS_00060369 TCONS_00207845 TCONS_00009883 TCONS_00037625 TCONS_00066093 TCONS_00229870 TCONS_00055867 TCONS_00208127 TCONS_00220716 TCONS_00199603 TCONS_00038933 TCONS_00244654 TCONS_00249414 TCONS_00039853 TCONS_00249989 TCONS_00066192 TCONS_00020651 TCONS_00089138 TCONS_00166139 TCONS_00185582 TCONS_00007555 TCONS_00062743 TCONS_00156997 TCONS_00251170 TCONS_00122096 TCONS_00187057 TCONS_00019962 TCONS_00198804 TCONS_00054574 TCONS_00009591 TCONS_00252056 TCONS_00108589 TCONS_00244651 TCONS_00124845 TCONS_00218943 TCONS_00176254 TCONS_00056728 TCONS_00178022 TCONS_00161185 TCONS_00135701 TCONS_00157440 TCONS_00047865 TCONS_00241788 TCONS_00136896 TCONS_00010709 TCONS_00007442 TCONS_00242595 TCONS_00038667 TCONS_00249012 TCONS_00209098 TCONS_00179054 TCONS_00249780 TCONS_00129415 TCONS_00244653 TCONS_00242007 TCONS_00063164 TCONS_00110327 TCONS_00010472 TCONS_00070840 TCONS_00071079 TCONS_00166189 TCONS_00152738 TCONS_00250938 TCONS_00071110 TCONS_00186411 TCONS_00176255 TCONS_00240475 TCONS_00020010 80 XLOC_005301 XLOC_131641 XLOC_155966 XLOC_145112 XLOC_095305 XLOC_153140 XLOC_002528 XLOC_125795 XLOC_140991 XLOC_152864 XLOC_153446 XLOC_090345 XLOC_154701 XLOC_129018 XLOC_128340 XLOC_036700 XLOC_126360 XLOC_005436 XLOC_021455 XLOC_040811 XLOC_139364 XLOC_033675 XLOC_126640 XLOC_134033 XLOC_121256 XLOC_022753 XLOC_150512 XLOC_152357 XLOC_023670 XLOC_152932 XLOC_040909 XLOC_011326 XLOC_053924 XLOC_100977 XLOC_111635 XLOC_003116 XLOC_037470 XLOC_095457 XLOC_154113 XLOC_073652 XLOC_113105 XLOC_010640 XLOC_120457 XLOC_032383 XLOC_005144 XLOC_154997 XLOC_064494 XLOC_076388 XLOC_132262 XLOC_106033 XLOC_034531 XLOC_107795 XLOC_098077 XLOC_081924 XLOC_095895 XLOC_027997 XLOC_148452 XLOC_083107 XLOC_006260 XLOC_003003 XLOC_149258 XLOC_022490 XLOC_151955 XLOC_127609 XLOC_108827 XLOC_152723 XLOC_078128 XLOC_148671 XLOC_037891 XLOC_066231 XLOC_006023 XLOC_042617 XLOC_042852 XLOC_101027 XLOC_092503 XLOC_153881 XLOC_042883 XLOC_112463 XLOC_147139 XLOC_010688 Coding TCONS_00208127 XLOC_126640 NonCoding NonCoding - 6:43190918-43192041 - TSS155634 1123 3 TCONS_00208127_1 47 0.996438112199466 1 0 0.00143440238699656 0.000464609468265689 0.00145264937491336 0.00131940783040205 0.000109910477385109 0.000433796921723655 0.000143845097646813 0.000148760161426659 0.000626064974163403 1.07472453868095e-05 0.000244365465443393 3.18404823521182e-07 0.000114443403932471 0.000272290695353677 0.000357074333918077 9.89750079237541e-05 1.68958361595175e-05 3.36833862582589e-05 0.000570287151704806 0.00257734116017415 0.000509334110875651 9.22706026376343e-06 6.62614548114244e-06 2.58759710312493e-05 0.000497706585581739 0.000675329121553226 0.000110362757675639 4.35432233220708e-05 1.44096440360187e-05 0.000173423399346007 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 3e-34 150 68.54 0.38913624220837 0 noncoding CCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTATATTGCTGAGTTTGGGGTGTCCTTTCTGTATTTTGTCAGTTTGTGGAGTTCTCTTTATTGTGGAGTTTTCTTACTGCGGGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCTTAGTTAGAGAAGCTTTTGTCAGTGTTCTGGTGGGTGGAGCTGGATTTCTTCTCTCTGGAATGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTGTGGTTTTGGAGTAACTTTGGGCAGCCTGTATCTTGGAGCTCAGGGCTGTGTTCCTGTGTTGCTGGAGAATCTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTTTGTGGTGCTTGATTTCAGTGTAGGTATGGAGGTGTTTGATGAGCTCCTGTCAATTAATGTTCCCTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGCCTCCTGCTTCCAGTTATCGGTCTTATTTTTACAGTAGTCTCAAAACTTCTCCTTCTATACAGCACCATTAATAAAACATCTAGGTTAAAGATGAAAAGTTTCTCCACCGTGAGGGTCACCCAGAGAGGTTCACAGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGGTGAGGTGGAATCAATAGAGGAGAGAGCGGGCTAGCCAGTAATCATTTCCTCATGTGCACTCCACAACTGGACCGCTCATAGATGTTCACGGAGTTATACAGAGAAGAGAAGAGGGAGGAAGGAGACAGAGGTGGCCAGGAGGATAAAAGGGAGGAATGAAAAGGAGAGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAATTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACGTGGTGGAGAAAAAGGAGAGTCCAAAGGGGGAGAGAGCAGTCAAGCCAGTAATCTCGCTCCCAAGTAAAAAATGGGTACTGAAGTTTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACCTAAAAGCAAAAATTAAAAATCTAGAGTCGAGTTTGGAATTTCAAAAATACAACGTTAAAAAAAAGAAGGAAA TCONS_00204998 . 5' 167907 TCONS_00204998 . 5' 167907 EMBV3_29546 GTTACCGAGTCATCGAGCCTCTTCTTAACTACTTTCCCAACATGTCCGTGGGCTTCACAG Gene GeneID:100299582|LOC100299582:XM_002700219:169_cdna Constitutive 0 NULL GeneID:100299582 X GENE LOC100299582 NULL similar to TatD DNase domain containing 1 EMBV3_40052 CTTTGCAGACAAACAAGCGACAGGCACCAGCACGCTCGTCAATGGCAACCTCCGACTATA Gene GeneID:100295626|LOC100295626:XM_002697294:104_cdna Constitutive 0 NULL GeneID:100295626 23 GENE LOC100295626 NULL hypothetical protein LOC100295626 EMBV3_24676 GCCTGTCTCACAAAACTAAGATGCCCATACCTCTGAAACAGCCCTACCTTTGGAGGCGAA Gene BVT0102_154972 - 1 EMBV3_19437 GK000019.2:51637710-51640322 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00917 TGGAACGCCTTGCACCAGGCTAGTTTTCAGGTGCAGATGTCAATTGTCAAGCCTTGGACA Variant GeneID:540802|ASB3:NM_001076927:167_cdna 660^795 4 EMBV3_37558 GeneID:540802 11 GENE ASB3 MGC142427 ankyrin repeat and SOCS box-containing 3 EMBV3_02094 ATGCTGTACACCTTAAACACAGTGCTGTATGTCATATCTCAGTAAAACTGGAAGAGGAAA Gene BVT0102_177205 + 0 NULL GK000025.2:27418951-27431636 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146736 1 XLOC_089193 Coding TCONS_00146736 XLOC_089193 Coding Coding ZNF668 25:27429304-27443140 = TSS109638 7249 1 TCONS_00146736_10 619 0.177817630017933 3 0.476255872786411 0.000169162204695371 0.00024648840311829 0.000172999085238963 0.00010879723385869 0.000121316335897849 7.41408088985339e-05 0.000163123154781784 3.08444984625168e-05 0.000249563422894595 0.00037418025330569 2.31386055087756e-05 2.03775777080994e-05 2.02984022319843e-05 0.000174422294353838 1.89436689234547e-05 8.66692472410877e-05 4.16387864986177e-05 1.31279176368927e-259 0.000122031825758862 0.000254380760522626 6.47133805302447e-05 0.000119071074863465 0.000189455201669557 3.67824744238514e-05 0.000285572575303979 0.000120787141621989 6.43452738922732e-05 8.06849408035129e-05 8.116380088975e-05 0.000238925946246411 XM_005224964.1 ZNF668 PREDICTED: Bos taurus zinc finger protein 668 (ZNF668), transcript 0.0 5157 100.00 0.394261277417575 NM_024706.4 ZNF668 Homo sapiens zinc finger protein 668 (ZNF668), transcript variant 0.0 2814 82.64 0.377845220030349 TCONS_00146736_10 sp|Q2TA17|ZN668_BOVIN ZN668_BOVIN Zinc finger protein 668; 0.0 1248 100.00 0.998384491114701 0 coding 0 0 0 0 -0.166443871383212 0.303945611698794 -0.00410550375274057 0.945099640708072 TGGGCGTGTCCTCCATGGGGCAGTGTGGCAGAAACCTGGAGGTTCAGGAAGAGCAGGCAAATGGCAGCAGCATCTTCCTCTGATGGAGGGTCCAAGGCCTAGGAAAAGGGGGCAGTGGTCAGAAGGAAGGCGTGAATTAACTTTGCCTCTTGATTTTATGAGCAGCAAGTTCACCAGAGGTCACAGTTACCCCCAAGTAGCAATGCCCAGAGACCTGCTCTCTACTAGATCTATTCTGGAAATACCATTTAAAATTTCTCTGAATACAGGTTCCCCAAATATGAAAGCTCCCCTAGGCCTAACTCATCTCTAGAAGTATAATAAGGAAACTAACATCTAAAGAATTGCATCCCATCTCTAATCACAAACATATTATCCTGCCTTCAGACCAAGTCCCAAAAATCTTACTGTCCCTAACCCTCTACTCTATAATTTTGAAACAAACAACCTATCTTACATGACATCTTAAAAGGAAACTTGTACCTCTCTTAGGACCTTCAATAAGATAAGTCCAATCTTCTATCTTTCACCCCTCAGCTAAATAGAGTAGCTTAGAGGCACTCAAAGGGGCTTCCCTGGTGGCTCAGACAGTAAAGAATCTGCCTGCAATGCAGGAGACCCAGATTCAATTCCTAGGTCAGGAAGATCCCTGGAAAAGGGAATGGCAACCCACTCTAGTATCCCTGCCTGGAGAATCCCATGCAGAGAAGTATGGTTGGCTACAGTCCATAGAGTCACAAAGTCGGACAAAACTGAGCAACTCTCATAGAGAGGCACTGAAAAAGCAGCCTCTTTCTCCAATAGACAGGCTAGGACCTGAGAAGTGAGGTTAGAGGCCTCCTACAGAGAAAAGGGCTGATTTGTTCCCCCTTCTGCCCTATTCCTTTCAGGGTCACAAAATCTCCTTTCTGAAAGACTCTCTTGGGTTCCCCGGATTCCAAACCATCTTCTATCTTGGAAATCCCATCTCCTTTCTGGTACTTCGCCCCCTACCTTTTTCTTTCCCACTATTTATCACTTTTCTCTCTCCATCCCTTCTCGTTTTTCCTTCTACCTTCTCTCTTAATATTGATGACAACAGCTACCCGTACAGCCTAAGCACTACCATGTGCTAGGCCCTGTGCTAAATAAAGAAAATTCGTTGTGTCACCTAATTCTCACAACTCATTACAATGCCTCTATTATTCCAGTTGACACACGAGGAAGCCCATTCACTCAATCTTCTTTCCAAAGCCCTTACTCTATAGCAGGCCCCCGTGCCTCCTATATCACCTTGGCCTTCTCTGACTCGGACTCTTCCCCCTCGCCGGGGGCCCCCATACAACTCCTATCTCCGACTTTAAACCTCCTTGCTGAACCTGCTCCCAGGAATTCTCACTTCTCACAAAGCCCCTTCGCTCGAGTCTCCTCTCCGAATCAACTACCAAAGAGGTCCTCTCGCCTCATTCATCTCTTCAGCCAGTTTTCTCTTAGGACCCCTACCTCACACCGGTGGCCCCTTCTCGTTCCCGCCGCGGGTGCGTCCGTTGGGGACCGCGAACGGGAGTGCGCCTGCGCAATGGGACCCTCACCCTAACTGCAGCCGCGCGCCCCAAAGGGTGGTTGTGCGAGGACTCTCGCGCTCCCACACACGCACACTCTGCAAGGGCTCAAGGAAGTGGAAGAGGAGGGAAAGAGGGAAAGGAGAGGGGGGAAAGGAAGGAGGTAGAGGAAAAAGGGCGCAGCTGGCACTAACCAGCGGTCTATCGCCCAGCTCCGCGGACACTTCCTATTGTTACTAGGAAACAGGAAGTGTCCTAGCCTCAAAAGCTTCCCCACGAAACTTCCGCCTTAAAAATGCTTCTGACCCGCCTCCAAGCAGCGGTTATACAGACACATTTCCGGTGCTAGGAGAGCGGCAACTAACGCGCGACTCCGACCCCGCCCACGTAGGTCAAAGAGCTCGTTGTTCTGCACTAACCTTAGCCACACTTCCGGGAAGATCCGCTAAAATCGTTCCGGTGCATATTGACTGAGCGCAGAAGAGGGGGAAAAAGCGTTCTGCAGCCCTGACCTCAGTACTTGGGCGACACTTATCGTGGGGCTCCCTGAAAAACTTCTCAAGCCAGATGGAGGGAGCGTCACTTACTGCTTTCTATTAAGGGAAATGTTATGGAATATAAGCGGATTTAGGTACTACAAATCTTGGGCATGGCCTTTCTGTCCTCCCACCTTCCAGTTCACGGTGATCTAGCGCCACGCTAGCAATAGTCGGTGCATCCCGTAAACCTATTCCCGTGTCCCTTGTCATTAGCACCCAGAAAGACCCCTTGCAAGGTGTTTCTCCGCCACCTTCTCTTGGGGCTGCTCCGGTGAACTCTGTCTTCCTCCCTTGCCGGGAAAGCTCTCTCTCACTTCCGTTCGCCGGCCCCGCCTCCTGTCCCTCCCCTTCTTCCCTCCCCCAAACCGCCTCCCCCCCCCCCCCCCGCTGGGTCCTAGCGCCTGCCCCTCCCTGGCAGAGTCCTGGGCTCTGTCGGTGAGAGGAGCTGCAGCTGACGCCACGGAGCCAGCCCAACTCTCTTGAGAGAAGATCCGCCCATCGAGGCCATGGAGGTAGAGTCTCCGGAGGAGCGGTCCCCAGCCCCGGGCTACAAGCGCTCTGGCCGCCGCTATAAGTGCCTGTCCTGTACCAAGACTTTTCCAAATGCACCCCGGGCAGCACGCCATGCTGCCACGCACGGGCTTGCAGACTGCACTGAGGAGATGGCCGAAGCGAAGCTGAAGCCAGAGACAGACCCCAAAGCGGAAGATGCCAGCGGGGACAAGGTGTCAGGTGCAGCGGCCAAGCCTCGGCCCTATGCTTGCCCGCTGTGCCCCAAGGCCTACAAAACAGCACCAGAGCTGCGCAGCCACGGGCGCAGCCACACGGGCGAGAAGCCCTTCCCTTGCCCCGAATGCGGCCGCCGCTTCATGCAACCGGTGTGCCTGCGCGTGCACCTGGCCTCGCACGCTGGCGAGCTGCCCTTCCGCTGTGCGCACTGCCCCAAGGCCTACGGCGCGCTCTCCAAGCTAAAGATCCACCAGCGTGGTCACACGGGCGAGAGGCCCTACACCTGCGCCGACTGTGGCAAGAGCTTCGCTGACCCCTCGGTGTTCCGCAAACACCGGCGCACGCACGCAGGCCTGCGACCCTACAGCTGCGAGCGCTGTGGCAAGGCCTATGCAGAACTCAAGGACCTTCGCAACCATGAACGGTCCCACACCGGCGAGCGCCCCTTCCTCTGTTCAGAGTGCGGGAAGAGCTTCTCCCGCTCTTCCTCGCTGACTTGCCACCAGCGCATCCATGCGGCGCAGAAGCCCTACCGCTGTCCAGCCTGTGGCAAGGGGTTTACGCAGCTCAGTTCCTACCAGAGCCACGAGCGCACGCACTCAGGCGAGAAGCCCTTCCTGTGCCCGCGCTGTGGCCGCATGTTCTCCGACCCCTCAAGCTTCCGGCGCCACCAGCGGGCACACGAGGGCGTGAAGCCCTACCGCTGCGAGAAGTGCGGCAAGGACTTTCGGCAGCCGGCTGACCTGGCCATGCATCGGCGGGTGCACACGGGCGACCGACCGTTCAAGTGCCTGCAGTGTGACAAGACATTCGTGGCATCCTGGGACCTCAAGCGGCACGCGCTGGTGCACTCGGGCCAGCGGCCATTCCGCTGCGAGGAGTGCGGGCGAGCCTTCGCCGAGCGAGCCAGCCTTACTAAGCACAGCCGGGTGCACTCGGGTGAGCGCCCCTTCCACTGCAATGCCTGCGGAAAGTCCTTCGTGGTCTCATCCAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGCGAGGCCACAGGGGCTCCCCCACAACAGGAGCTGGTGGTGGGGCTGGCACTACCGGTCAGCATGGCTGGCGAGGGCCCAGCCGCCCCAGCATCAGGGGCGGCGCTCGGAGACCCTCCAGCTGGGCTGCTGGGGCTGCCCTCGGAATCGGGTGGTGTGATGGCTACCCAGTGGCAAGTGGTGGGCATGACGGTGGAGCACGTGGAGTGCCAAGATGCAGGGGTTGGTGAGGCTCCTGGTCCCTTGGGGGCGGCAGGTGAGGTGGGGGGTGAGGAGGTGGATGAGAAACCACCCCAGTTTGTGTGCCGGGAGTGCAAGGAGACGTTCTCTACGCTGACATTGCTGCGACGGCATGAGCGCTCACACCCAGAGCTCCGGCCCTTCCACTGTACCCAGTGCGGCAAGAGCTTCTCAGACCGGGCTGGGCTGCGCAAGCACAGCCGCACCCACAGCTCTGTGCGCCCCTACACCTGCCCCCACTGCCCCAAGGCCTTCTTGAGTGCCAGCGACCTGCGCAAGCATGAACGCACCCACCCTGTGCCCATTGGAACCCCCACGCCCCTCGAGCCCCTCGTGGCTTTACTAGGAATGCCTGAAGAGGGACCAGCCTGAGGTCCAGGTCCCTCTGCCACACTCCTGGGAACCCTGCCCCTATGAGGTGCTTCCCAAACCCCCCTTTGCCGCAGATCACTCTTAGACTTCAGATCCATCTCTGTGCCCAGGCAGCTAGCTCATCCTGACAAAGCTGGGGACAGTGGTGGCTGGTAGCAGTTGGCAGGAGACCTGGCTCGCTCCAAGCACCACTCATTAAAGCATTCAGTTGACACTGGGTTGTCTTCTGTGTTCTGGTTGGGGGTAAGTAACAGAGGAGTTTGGGCACCTGATAAGGTTTAGTGGAGATCCCTGGACTGACAAGTTAGAAACTAGAAGGGTCTTTGGGTGCATTGTTTTCTCTAAATATGTTTTCAGAATATCTTGTGATGAAGGGTTCCAGGATCAAGTGAGTACCGGGAATTCCTGTACCTTCTTGGGAATTCTTGGTGATCAAAGTATATTAAAGTCATTGATAAGTCCTGCAATGAACAAATCTGTTTAGCTTCTTTAGCCCATAGTTATTTAACCTCTTACTGAGAGTTCTACTTCTGTCTTTTTACAGATAATAAACTGAGGCCAAAGTTATTATATTTCCTATAAATTATAATAACAGACTAGAAAATATACTTGGAGTCCCATTCTCAATAACAACAAAACCCATAAACTACAAAGAAATAAAGCTCACACAAAAAACACAAATCCTACATGAAGAAAATGGCATCTCTATCCTGAAGGATATAAGACCTAACTGAATGAAGATATACCATGTACCTGAATGGAAAGATACTATTAAAAGCTGTTGATTCTCAGTTTAATCTTTAAGTTCATTGCCATTCAAAAGGATATTTTTAACAGAACTTGAAAATCCTAAATTCCTGTGCAATATATATTTTTAAAAACTGGAGGTGATAATTAACACTAATTTTTCAAAGACCAAAAATGGAAAAACAAAAATGAGGCCCTACAGTGTAAATTGGTACAGCCTCTTGGAAAGATGATTTGATGTTTATCAAAAGTTAAATGCTTTGTGATGTATGTGATCATTATGCTGTACACCTTAAACACAGTGCTGTATGTCATATCTCAGTAAAACTGGAAGAGGAAAAAAGAAGCAAGCAAACACATTTTTTAAAAAGTAAAAGGACTTCCCTGGCGGTCCAGTGGTTAAGACCCCTCACTTCCAGTGCAGAGGGCATGGGTTTGATCCCTGATTGGAGAACTAAGACCCCACAAGCCATGCAGCACAGCCAAAAAAAAAAAAAGCATACACTTTTCGACTCAGCAAATACACCTCAAAGAATTTACACCACAAATATCTTTTTCCAATTCTGTGACAAAACTGAAAATGAAAGATTGTTCAGTGCAGCAAAATATGTGATGACTGGGAACACCCTCTATGTCCATTGCAAAGGTCTAAAAGCCACTGTAAAATATATTATGCAACAGTTTTTAAAAAATTAGACTTGTCAATCTGTGTCGTTGAATAATATCCAAAAAAAAAGTCAAATGAAAAAGTGCACAGCAGTGTGGTTAGTATTCTCCCATTTGGGCCGAATTACTCGTAAGCGCTCAAATCCAAGTGCACGGAGGAGTCCGGTGGACTGCAGGCCACGGGGTCACAGAGTCGGACACGACTGAGCGACTTCACTTCCACTTTTCACTTTCCTGCATTGGAGAAGGCAGTGGCAACCCACTCCAGTGTTCTTGCCTGGAGAGTCCCAGGGACGGCGGAGCCTGGTGGGCTGCCATCTATGGGGTTGTAGAGTCGGACACAACTGAAGCGACTTAGCAGCAGCAGCAGCAGCACAGTATTTCTAGAAGGATACTCAGGAACTGATTCTGAACTATAAATTCCAACTACTAGGGCCTTTCACAATTATAAGACAAACCAAAGCCAAAGGTCACAGTGAACCAGATCCTCCTTTCCACACTGTCACCTGTAGACTTGGGGGCCACCAAGTTGGCAGCCTTAGGAAATGTGGTGTTCAGGCTCCCTCCAGCCCATGTGCTGCTAGCACCTGAAGCAGAAGTAGTAGGTATCACCTTAGTGTCAGGGACCTCACGTCCATTCTCCATAGCAGAACAAGGGGGCCGCGTGGCAACAGCAGGGACCAGGGTGTAATGGCTGCAGAAAGAGGGCACCAGTTTGACCAAGGACACTCACTGGCCATACTCACACCCAGAGCAGGATAAGCACTGTCCCTGGGCCTCCTTTCTGTCCAGGCTGGGATCAAAGTCTAAGGGTCCAGGAAAGAAACAGACATCAGATGGGGAGATTGAAAGCAGGAGAACTTTTGTTTACTACTGACTTGATTTTTGAACTCGAGCAAGATGCTTTATCTTGGGGGTTGGGGTGGCACCTTTTAAAAATATATTCTTGTAAAGATACCATATGGGCTTCCCAGGTGGCACAGTGGTAAAAAAAATCATCTATCAAACAGGAGACTCAAGAGGCAGTTTCCATCCCTGGGTGAGGAAGATCCCCCGGAGTAGGAAATGGCAACCCAGTCTAGCATTCATGCCTGGAAAATCCTGTGGACAGAGGAGACTGGTGGGCTCCAGTTCATGGGGTCACAAAGAGTATTGGGCACAAGTGAGCACGTGTACATATACACACATACACAAAGATACCATATACACTAATCGATAGATCTCCCTGGCTATGTGTCTACAATGAAGGATGGAGTGGGTTCCCTGAATGTTTAGAAGAGATGCACAACTCCTGCTCCCTTTCTGGGCCCAGACAATCCGCCCATCCCTTGGGCCCCCTTCTCTGACACCCCCAGCATCCTATACCAAAGTTCCTGCTCCCTGAGGACTC EMBV3_25711 GACTTCAAGTCAGGTAACGATTTCTTAGGTTCCACAATAAAAGCACAATTCACAAAGGAA Gene BVT0102_201557 + 1 EMBV3_23081 GK000022.2:35681691-36248179 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126731 TCONS_00126743 TCONS_00126740 TCONS_00126730 TCONS_00126729 TCONS_00126738 TCONS_00126746 1 XLOC_077484 Coding TCONS_00126740 XLOC_077484 Coding Coding MAGI1 22:35957456-36028849 j TSS94962 1686 1 TCONS_00126740_1 93 0.205812574139976 4 0.976439937247871 0.000800342698373416 0.00219151907822916 3.74289816667618e-11 0.00137687063311334 0.000917557639968621 0.00159675157337428 0.00267854765877383 3.81005425509274e-10 0.00177339496740833 8.38793969720708e-08 3.72715927851482e-10 7.91702198694852e-21 0.00011991729973027 0.00101761466051961 8.43953387456966e-09 6.8500792028322e-06 3.70301120668597e-06 5.29566814703804e-06 0.00233822824430318 0.00212795349382348 6.08282790133658e-09 3.64513518883872e-128 1.97708197849628e-06 5.73659509601101e-42 0.0027184270692896 0.00277592468097519 0.00173999787997721 4.25238142059686e-96 3.29722713053031e-34 1.37303889490065e-06 XM_002696963.3 MAGI1 PREDICTED: Bos taurus membrane associated guanylate kinase, WW and PDZ domain containing 1 (MAGI1), mRNA. 0.0 955 100.00 0.313167259786477 XM_005265575.1 MAGI1 PREDICTED: Homo sapiens membrane associated guanylate kinase, WW and PDZ domain containing 1 (MAGI1), transcript variant X13, mRNA. 0.0 902 93.08 0.359430604982206 TCONS_00126740_1 sp|Q96QZ7|MAGI1_HUMAN MAGI1_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; 1e-54 185 94.62 0.989247311827957 0 coding 0 0 0 0 0.128496808484868 0.567571959169098 -0.0295811563915656 0.523923592182046 GGCGGGCGGCGGCTGAGTGCGCGCCTGGACTCCGGCAGTGACCGAGGCAGACCTTGGGGCCACTCTAAGGGCCCGCAGGCACAACCCGGTCTCCCAGAGAAGGAGAGGTGCCTGGCGTGGACTATCTCTTTGGAAATGTGAAGGAGTTCTTGGACCTCGAGCAGAGCGGGACTCTTCTAGAAGTTGGCACCTATGAAGGAAACTATTATGGGACACCCAAACCTCCTAGCCAGCCAGTCAGTGGGAAAGTGATCACGACGGATGCCTTGCAAAACCTTCACTCTGGCTCCAAGCAGTCGACCCCAAAGCGAACCAAGTCCTACAATGATATGCAAAATGCTGGCATAGTCCACGCGGAGAATGAGGAAGAGGATGATGTTCCTGAAATGAACAGTAGCTTTACAGCCGATTCTGGTGACCAAGAAGAGCACAGTCTCCAAGAAGCAGCACACCCACCTGTGAATAGTAGCATCATCGCTGCTCCCATCACGGACCCTTCTCAGAAGTTCCCTCAATACCTACCTCTTTCTGCAGAGGATAATTTAGGTCCTCTACCTGAAAACTGGGAGATGGCCTATACCGAAAATGGAGAAGTCTATTTTATAGAGTAAAGTACCATTATTTCTACTTGAATCTCTCCCTTTTTCCCCCCTATTTCCTTTCTCTTTCTCTAGCAGCTACAGATGTAAATTAACTCTAAAAGGATTGATCACATGCTGTTGGTCTTCTCTCCTACAATTTAACAAGCCTTGTACAAAAAAAGCAATTAGCATAACATCCTAACCATTGCATCTGAAGAGCTGGAGGAAGCATAAGAATAATTATTTCCCTAAAGAGTCAAACAACTAAATTATGGTGCATATATAAATTATGATATTATATATTAATATGAAGAATATATCTAGCTCCTTAGAAGAGGTAAATCCTTTGCTTTTTTTTTTTTTTCTTAATTGGGTTACAGTTTCCTTTGAGTGTTAAAGAGTTCTTCACATATTTTTGATTCAGTTTCTTAATTACATTTGTGATTTGCAAACATTTTGTCCAAATTTGATTTTTCATTCTTAACTGCATCTTTTAAAGAGCCAGAAGTTCTTAATTTTTATGAACTCTAATCACTTTCTTTTTTCCTTTGTGAATTGTGCTTTTATTGTGGAACCTAAGAAATCGTTACCTGACTTGAAGTCAAAATTCAGTCATTTTCTGCTATATTTGTTTTAGAAGTTTTACAGCTTACATTTTACATTTTGGTATATGATATATTTTTAGTTAATTTTTTTACATGGTGCAAGGCAAATGGGTTAAAGTTTGAGAATATAAAGATGTGAAAAGTCTTTTAAAATTAAAAACTTAAATATTATATAGTTAAACATTAGCAACCAATACTGGAAAGGAACAAAAAAATTTATAAAATTGAAACCTTTCTAGAAAATCTGAGCTAATATAATTTCTTAACCATGACAGTCAATTTTTAAAATTTTTTGTCCCTCCTTTTGAGATTTCCTGTTAACATTCACCATAGTATTATGAACCTGTAAAAAATAAAAATAAAAAGACCAATTAAACTTTGAAACAATTCAAAACGTAGGTAAATCTGTTCTACTCAGATGGATTAATGTTACAGGTCTGCTGTTCATGGAACAATAACAACAGAGGACATTTCTGAACAACATGAAGTATCTTATTTTG EMBV3_43377 AGAGACAGGCAGGGGCTGGAGCTAGTCTGCCAAAGAGTGAGAAGGCAAACTCGAAAGAAA Gene GeneID:513727|OVOL1:NM_001081521:616_cdna Constitutive 0 NULL GeneID:513727 29 GENE OVOL1 MGC155103 ovo-like 1(Drosophila) EMBV3_11998 CGTCTCTAAGGGAAGATTAATTCTCAGTGCTGATGGGAAAACTGAGGCACCAAGGATATT Gene GeneID:529423|LOC529423:XR_083658:97_cdna Constitutive 0 NULL GeneID:529423 4 PSEUDO LOC529423 NULL similar to family with sequence similarity 40, member B EMBV3_16868 ATCCACGAAGAAGTGTGATTTACGCGTGATCTTTCATATGTAATTCTTAGAAGAGCTTTC Gene GeneID:618550|LOC618550:XM_002697025:452_cdna Constitutive 0 NULL GeneID:618550 22 GENE LOC618550 NULL similar to heme binding protein 1 EMBV3_43223 GGCCTTGTCTGGCCTGTGGTGTATGACTGATCTGTGGAATGTTGTGATGGATTACAGTGG Gene GeneID:531241|ADAM23:NM_001083458:35_cdna UTR3_Alt 2 NULL GeneID:531241 2 GENE ADAM23 MGC139293 ADAM metallopeptidase domain 23 EMBV3_29693 AATATGATAATTTCAACTGTGTTGGAAAGAAATGTCCTAAGAATAATAATTTTACAAATA Gene GeneID:531644|C1GALT1C1:NM_001034575:15_cdna Constitutive 0 NULL GeneID:531644 X GENE C1GALT1C1 MGC129054 C1GALT1-specific chaperone 1 EMBV3_26234 TGACTCAAGCAGCCCCTCCATCTCCGGCAACTCTCGACAGCTTCCAAGTGTGAGTTGTTT Gene GeneID:100336410|LOC100336410:XM_002699359:260_cdna Constitutive 0 NULL GeneID:100336410 29 GENE LOC100336410 NULL spectrin, beta, non-erythrocytic 2-like EMBV3_36697 CCCTACAGAAAAAGCACAATTTAAAAAAAATCCTTACTAAATAGGTGACAAGTCTGACAG Gene GeneID:282301|PDGFRA:XM_002688255:168_cdna Constitutive 2 NULL GeneID:282301 6 GENE PDGFRA NULL platelet-derived growth factor receptor, alpha polypeptide EMBV3_05314 TTTCACGTGTTAGAAGCTCTGCAAGAAGTTTCCATGGGGGAGCATCTGCGGTGTTGCCCG Gene BVT0102_080425 + 0 NULL GK000013.2:79324193-79328075 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044141 1 XLOC_026127 Coding TCONS_00044141 XLOC_026127 Coding Coding PTPN1 13:79263480-79327035 j TSS32504 3294 1 TCONS_00044141_3 386 9 0.948311671963999 0.000287982419480759 0.00010066693139113 0.000413954591046254 1.84642570532468e-05 2.10270063762125e-05 1.64679271329181e-06 1.62044662074933e-05 0.00021660741448164 0.000701346208754764 0.000157767993729845 9.67323546358883e-05 1.95930993008765e-05 1.19711488287177e-05 0.000244889687598564 6.50862034576735e-06 0.00076341769505061 1.0344813570231e-200 3.50456120183263e-05 0.000191893352644528 3.45348637667448e-06 7.50897492320031e-143 0.000334258686268507 0.000481338385993286 0.000197093771068569 0.000109148795940805 7.75430522304824e-05 4.6234757987433e-05 0.000202257783267344 0.00010645547633573 0.000297399844454817 XM_005214633.1 PTPN1 PREDICTED: Bos taurus protein tyrosine phosphatase, non-receptor type 1 (PTPN1), transcript variant X1, mRNA. 0.0 3662 100.00 0.615968427443837 NM_002827.3 PTPN1 Homo sapiens protein tyrosine phosphatase, non-receptor type 1 (PTPN1), transcript variant 1, mRNA. 0.0 1512 87.87 0.367334547662417 TCONS_00044141_3 sp|P18031|PTN1_HUMAN PTN1_HUMAN Tyrosine-protein phosphatase non-receptor type 1; 0.0 671 91.51 0.940414507772021 1 coding 0 0 0 0 0.010217707673154 0.927702901179543 0.0345958445511244 0.490739408553406 GGGTTGACATGAAGAAGCGGCGGCGGCGGCGGCGGCAGCGGCGGCTGAGGCGGCGGTAGCGACGGAGCCGAGGTTTGCGGCGGGACTCGGGGCGGCGAGCGCGACGCGGCCTAGAGCGGCAGACGGCGCAGCGGGGCCGAGGGAGAGGCGCGGCAGCCGCCCCTGCCCGTCATGGAGATGGAGAAGGAGTTCGAGCAGATCGACAGAGCTGGGAGCTGGGCGGCCATTTACCAGGATATCCGACATGAAGCCAGTGACTTCCCATGCAGAGTGGCCAAGCTTCCTAAGAACAAAAACCGAAACAGGTACAGAGACGTCAGTCCCTTTGATCACAGTCGGATTAAACTTCATCAAGAAGATAACGACTATATCAATGCTAGTTTGATAAAAATGGAAGAAGCCCAAAGGAGTTACATTCTCACCCAGGGCCCTCTACCCAACACCTGCGGCCACTTCTGGGAGATGGTGTGGGAGCAGAAGAGCAGGGGCGTTGTCATGCTCAACAGAGTGATGGAGAAAGGATCGTTAAAATGTGCACAGTACTGGCCACAGAAAGAAGAGAGAGAAATGGTCTTTGAAGACACAAATTTGAAATTGACATTGATCTCGGAAGACATTAAGTCCTATTACACAGTACGACAGCTGGAATTGGAGAACCTCATGTCTCGAGAAACCCGAGAGATCTTACATTTCCACTACACCACGTGGCCTGACTTCGGAGTCCCCGAATCGCCGGCCTCGTTTCTGAACTTTCTCTTCAAAGTCCGAGAGTCGGGCTCGCTCAGCCGTGAGCACGGCCCCATCGTGGTTCACTGCAGTGCTGGCATCGGCAGGTCAGGCACCTTCTGCCTGGCTGACACCTGCCTCTTGCTGATGGACAAAAGGAAAGACCCTTCTTCTGTTGATATCAAGAAAGTTTTGTTAGAAATGCGGAAATTTCGGATGGGACTGATCCAGACAGCAGACCAGCTCCGCTTCTCCTACCTGGCTGTGATCGAGGGCGCCAAGTTCATCATGGGAGACTCTTCGGTGCAGGAGCAATGGAAAGAGCTCTCCCATGAGGATCTGGAGCCCCCACCTGAGCACGTCCCCCCACCTCCCCGGCCCCCCAAGCGAGTCCTGGAGCCACACAACGGGAAGTGCAAGGAATTCTTCCCCAACCATCAGTGGGTAAAGGATGACACTGAGGAGGAGGATAAAGAAGACGGCCCCGTCCAGGAAGCAACCAGAGCCCCGTTAAATGCCCCCTGCAGCCTGGAGAGTTCCTGTTCAGCAGCAACATACAGCCTGACCCAGTGCCAGCCTCGTCCGCCTGGCAGGCAGCCACCGTGAGTGAGGCAGCGGGCAGGGCCGCAGCTGCCCTTGAGCCGCAGGTCTGCACTGAAGCGGCCCTCCTGGGCACTTGGCCTCGGCTCCACTGTCCCCCCTTCCTCCCCCTCCCCTGCTTGGACGACCAGACCCACAGCCCGGTTCTGAGAGGGCACAGGAGGGTGCTGTGCCCGTGGCACGGGGCAGGGCAGCCTGGATGGGCAGCGGGACGAGCCTCACATGGGGGCCTTCGGTGGCTGGCACACAGTCCTTCCCTCCGCCCTCCTGGGAGACTGCCCGTAGTGAGCCCCTCTCCACTCCGTATTTATTTCTACATTGTTTCCCCGAGGGCATCCACAGTGCACTAGCGTCTTAAACCAGTAACAGCTTCCAGTTTTTTGATGTCAGCCTTGCACCAAGGGCTTCATCCAGAATTACAGCAGTGAACCCTCAGGTCGGGCTGGGAACGGAGGACTTTGCCGTGAGCCTCTGCATAGACCAGTGCCCAGTAGGAGGATGGCTGGGAGCTGTCGTGTCGTGATGCTGCGGGGAGCTTGAGAGGAAGTCTGCGTGTGTTCATAGAGCAAGGGGATAATGATAATGGACACTTGGCTATTTAAGACACGGTGTGAGGTTCCTTTGTCCCGGTTCCTCACCTCCCCAGTTATCTGCTCAACCTTGATCTCAGCCACCACTCCCTCTGTGTGTATTAGGATGCATGTCCCATCTTCCTGTGTCCCCATCAGATATGACGTGCTTGGAATACTTCGCGCTCTGCTGACTAGCGTGCCCCGTGTACAAGTCCAGTTTCCCTTTGCACGGTCTGATCGTTACGTGGCTGTGGTTCCTAAGACTGTTGCTGAAATAGTCGCCATTCAGCAGTGGAATGACGTTTTCGAGTAACAGATAGTTGCGTAATTCCTGGCACGACAGTCTGGTGACTTTCAAGTGAGGCCCAGCCTGTCCTGCTCCAGCTGGGTCCACTGCAGCTCAGACATTCCAAGGGGATGGGAAGCATAGTCACACCTGCACTCTGGACATGGAGAGAAGCAGGGTCCTCCCTCCCTCCCACCCACCCACACACGCACCTTTGGGATCAGCCTCCACTGCGCCCAAGTTCACACTCAGCTTGAGCGGACCGTGATTTGGAACCAAGGCAACTGTCGGAAACTGCCCTTCCTGAAACATCCTGGACGACGGTCCCTTCAAGTCAGCCTGTGGCCCTCTAGGTCCGGGGGCCTTGCTGCACGAGGTGTCTGCCCCCACCTCGAACTCTGGGGACTGATGGTGCTCAGGACTCCGCCTGTGTGGGGGGAACCTATGACCTCCACATTCAGTGGCTTTTTTTACCAAGAAAAAAAAAGGCAGCTGTGGCTCATGAGCTGCTCTTTTGCCAGCATTTTCACATTTTTGCCTTTCACGTGTTAGAAGCTCTGCAAGAAGTTTCCATGGGGGAGCATCTGCGGTGTTGCCCGCAGGCCTTGGTGAGGTGCAGATGAGGCTGGGGGCCGGGCTGTAAGCGTGTGAGCTGGGCTTGTGCGTCTGTTCTGTTAAGTCCTGTATGTGCATGTAGTAGTTTGGGTGTGTATATACAGTAGCATTTCAAAGTGGATATACTGGTTCAACCTCCTGTCCTTGGAAAACAGATGGCTCTGCGTCCTGTCGCCCGTATGTTAGAGAAGTAGTGAGCTGCTGTGCTATATGCCTTAAGCCAACATTTACTCATCAGGTCATTATTTTTTACAATGGCCATAGAATAAACCATTTTTACAAAAATAAAAACAAAACAAAAAAGCCAGGTGTTTTGGTATAATACCTTTCCAGGTGTGTGTATACGTGGATGCATGATGGGGGCGGGGGGGCGCGTCTCAGGGTCTTCTGTGACCTCACAGAACTGTCAAACTGTACAGTTTTCCAATTTGCCATATAAATGATGGTTTGCATTTTAGTTGCAACAATAAAAATCTTTTTTTCTAAAGAACATGG EMBV3_07411 TCCAAGGCTGGACACAGGGGATTCAGAGAAAAACCAGACTACATGGAATGAGCCCGGACT Gene GeneID:280911|RGR:NM_175775:203_cdna Constitutive 0 NULL GeneID:280911 28 GENE RGR NULL retinal G protein coupled receptor EMBV3_26963 CTGTATAAAGACAACCAGCTTCTGGATGACAGCAGGACATTGGGCGAGTGTGGTTTCACC Gene GeneID:528828|LOC528828:XM_002698074:66_cdna Constitutive 0 NULL GeneID:528828 25 GENE LOC528828 NULL similar to Transcription elongation factor B polypeptide 2 (RNA polymerase II transcription factor SIII subunit B) (SIII p18) (Elongin B) (EloB) (Elongin 18 kDa subunit) EMBV3_38892 TCGAAGACTACTACAGGAATTGGTTGGCAGTGCCAGCTGGCTTTTTTCTTTTTTTAATAT Gene GeneID:514787|STK38L:NM_001101092:11_cdna Constitutive 2 NULL GeneID:514787 5 GENE STK38L NULL serine/threonine kinase 38 like EMBV3_24994 CTGGGGCCTGTGGTTTTGCATTCCAGGCAGGGGCTGAAGCTCTTCTGTGCTATGAAGCGA Variant GeneID:617066|LYPD4:NM_001076442:403_cdna 204^355 2 EMBV3_11065 GeneID:617066 18 GENE LYPD4 MGC133841 Ly6/Plaur domain containing 4 EMBV3_31158 CATACGGCTTGTCGACAGTCTACCCCTATGGGGACCCTGAGTTGTTGGACTATGACTCTG Gene GeneID:528959|LOC528959:XM_002697887:462_cdna Constitutive 0 NULL GeneID:528959 25 GENE LOC528959 NULL similar to hCG1658583 EMBV3_27360 AGAACCTGACTTACGAGAGGCGCCAGCCATTCCTCCCGGACAAGATCCATGCAGAGGCCA Gene GeneID:528008|LOC528008:XM_002697895:486_cdna Constitutive 1 NULL GeneID:528008 25 GENE LOC528008 NULL hypothetical LOC528008 EMBV3_01909 GAAATCTATTTCATATTGACTTTGGGCACATTCTTGGGAATTATAAAAGTTTCCTGGGCA Gene GeneID:530001|PIK3CG:NM_001102125:63_cdna Constitutive 0 NULL GeneID:530001 4 GENE PIK3CG MGC157122 phosphoinositide-3-kinase, catalytic, gamma polypeptide EMBV3_33660 CTGTCTACAATCACAGGCTTCTACTCTAAGGAACGTATCAATGAGTGTGATGAGAAATGT Variant GeneID:528207|FASTKD2:NM_001102117:32_cdna 46^866 1 EMBV3_21930 GeneID:528207 2 GENE FASTKD2 MGC151610 FAST kinase domains 2 EMBV3_15244 CATTGACCAAAGGTAGATACCCTCTAAGTAAATAATTGACCTTTAAATGATTGTTACAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16654 ATCTACGCTACCGATGGATGCTGTACAAGTCCAAGCTCAAGGACTCCAGCCACCTGCTGA Gene GeneID:520207|LOC520207:XM_002696829:632_cdna Constitutive 0 NULL GeneID:520207 21 GENE LOC520207 NULL similar to Nesprin-3 EMBV3_35738 GATGTCGAGTTGTGTAGGGCCAGGAGCAGAGAGACAGACGGTGATGAGATGGTGAGAAAA Gene GeneID:533896|DUSP26:NM_001076004:1_cdna Constitutive 0 NULL GeneID:533896 27 GENE DUSP26 MGC139846 dual specificity phosphatase 26 (putative) EMBV3_34126 CCCTGTGGCGGCCGTGAAACTAAAACCTCTTATATCGCCATGATTATAATAAACGACTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23967 GTTTGCTGCCACTGCGGGGGCAAAACGAAGGTTGTCTTAGTCTTTGCTCTCAGCATTGGT Variant GeneID:282573|KCNMA1:NM_174680:245_cdna 483^644 3 EMBV3_09232 GeneID:282573 28 GENE KCNMA1 NULL potassium large conductance calcium-activated channel, subfamily M, alpha member 1 EMBV3_40496 CCTCTCCCCCCACCTCTCCGTGTTCCTACCCATCATGAACCCTGTACATTTGCCATTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39655 CCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGACGTGCTGAGAAGCAACCTGGTGCAGG Variant GeneID:538793|ZNF238:NM_001078016:83_cdna 849^960 2 EMBV3_20635 GeneID:538793 16 GENE ZNF238 MGC142551 zinc finger protein 238 EMBV3_33727 AGCATTCAGTAGGCTCGTGTGGTCTCAGAATCCCACAAAGGCAAAAGATGCACCCCTCTA Gene BVT0102_050516 + 0 NULL GK000001.2:151414208-151517548 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011977 1 XLOC_007527 NonCoding TCONS_00011977 XLOC_007527 NonCoding NonCoding - 1:151449713-151452623 - TSS9054 2910 1 TCONS_00011977_8 109 0.0549828178694158 1 0 0.000902371762360411 0.0012534643473362 0.00220695796462058 0.00105300059069564 0.00108075094756076 0.000277805368297279 0.00113828561133433 0.00135977515709198 0.00094898472389795 8.34208495221783e-05 7.86662277434981e-06 9.83005939519229e-05 0.000217907647238982 0.00103455452560507 0.000473760143608865 0.000326741066875377 5.13473882899162e-05 5.17339509867169e-05 0.00242481561320505 0.00354627969617004 0.000330695884068885 0.00101237430146731 0.000305800911463969 0.000740294955156626 0.0022467948890834 0.0027189133917564 0.00140337729502097 0.000102323230874837 0.000276929409937636 0 XR_231454.1 LOC101902127 PREDICTED: Bos taurus uncharacterized LOC101902127 (LOC101902127), 1e-12 80.6 71.88 0.0539518900343643 XM_005275854.1 LOC101929020 PREDICTED: Homo sapiens uncharacterized LOC101929020 (LOC101929020), mRNA. 9e-07 60.8 73.02 0.0415807560137457 0 noncoding 0 0 0 0 -0.804756415319464 0.00114015111244488 -0.0348702035855029 0.498633668705779 GGTGCTTAAGGGAGCCTCAGCCTGATCAGTGGCCTGTGAAGCCCTCTGTCACGCAGGACGTCCAAGTGTGTTTTCCACTCCCGGCTGCCCTGTGCCGGGATACATGTCATGCACTGCTCACCTCTGGGGCACCACTCTCACCAGTCACCTTTGGTCCAGTTTCCTGGCAGACAGCAGTATCCCAATTCGTGCAGAGGTGCAGGCTAACTGGGAAGCAAAACAATAGGTGACTGGAAACAATGAATTGGAATCTCTGCCCTGCCTCTTCTGCTCCCTGGCTGTCCTCTGTGTATCAGTCGGCTCAGGCTGACTTAACAACATATCAATACCACAGACTGGGAGGCTTAAACAACGATGTTATTTTCTTACAGCCCTGCAGGCTAGACGTCTTAGATAGCCGGGTCAGCAGGGTAGTTTCCTCTGAGGGCTCTCTCCTGGGTGTGCAGCTGTAAAAGGCCGATGAGTTTTGGGTGCACTGGCCCTGCAGATAGTTAAAAGTGATGGCGTCTTTACTGGGGGATGGACAAGGTCACTGGCGACTAGCTCTCCCTTCTCTGAATCATGACAGATTCTGAGCAATGTTACTCCTGCACCAAGCATTTGCCTGGGGGTGGGGGTGCGAATAGGGGTGGGTGGGTTAGGGTTGGGGGAGACATTTAGTTTCCTTTGGACCACTTGCTACATTTTGATGACAACAATTCTCAAAACGTATGGAGGTGCTCTTGCTTTCTGAATCTTTTATTTCTAGAAGAGTGAGGAAGGAAGGTCAAATCTCTTATTCTGTGCCCCTGCAACTTCCACACTCCCATCCTGGGCTGAAATCAGAGGAGTCTGAGCAGATGAAGAGATAGGAGTCAAGAGCATGTCCAAACAGAGTAATTCTTCCAATAATAATGTTGACAGCTTATGTTATCTTAGGGTTCTTAAGTCTCTTCTTTGGAGTCAACACCATTGATTTATCAACTTGTTTTCCTTGACTTTATGGCTCTTTCTCATTATTTTCTGAATATGGCTTTGCTTTGCTCCCTGGAATGGGAAACAAAGGTTTCTGATGAATCCTGGGACAGGCCAGATCTTACTCTACAATGATGTAGCTGCTCACAGGCAAGTCTGGCCAGCAGTGTTGGGGTTTCCCTTCCTATCAGTGGAATATGGCCTCAGATGGCCGTGAGCATTCAGTAGGCTCGTGTGGTCTCAGAATCCCACAAAGGCAAAAGATGCACCCCTCTACAGTTCCGGGAGCCTTAAGTGGAGATAGAGAAATCCGGTCCTACAACTTCCCCAGAGATTTTCACCAAATGGAAACACCTCTCTTGCACTCTCTCCAGAGTTCCTTTGTGTGTGTCCTCTCTTCCCTCTCCCTCAGAACCGTTATTTAATTTACCTCGTCTATCAGAAAATCAGGCATTTAGTGTATTTCACCTAAAGAACCTAAAGAGGACTTCATAATCTTAGGAGTTGCTAATGGTGGAATTGCAGGCATTTCCACAGAATGTTTTAAATGATTGGGGGGGGCTCTTGAGTCACACGCAGGTGGCGGAAGCCGACTGTTTTGGCCTTAGCAAGCTTATCACATGAGGCCAGAGACCAATGTTCATTTGCTGTGAATGGATTTCAGTTGGGACAATGCTTCTAGCTCCTTAGGAGTTCCCTCAGAGAAGTGTCTGTGAAGGAGCTCATTTTTCACTCTTGCCCGGCTCTGTGGTTAAGAAGTGGCCCCTGGGAGCCAGCGCCTTATTACAGCTGGAAGCCACGGTGGGCCTCCTCCTCCTTTGTCCTGGCCCTGGCATAAGCAAGAGCCTCCGGAGGCTGGAAGGCTGGGGTCCACAAGCGGCTCCAAGGCCATAAGCCTGCGAGGGGCTCTGGTGGGTATGGTCCACAGGCGGGCTCCTCCTGGGGACCCGAGGCTGGGTTCGGCCGCGGGCACACCTGGAACGCGGGACCAAGGGCAGAGCCCACCCGCGACAAGTGCCCGGGGGCACTGGGCCGAGCCCTGCCCCCTCAGACCTCGGGGCCCACGTGCCGGCCTGCAGCTGGTCACTCACAAGCGACAGCCGCCATCTGACTGGAGACGCCACGCGGCCGGGCTGCAGAGCCTGGTTTGTGCAACCTGGGGCACGTTCCTCAAGCCCGTCTGGCGCTCTTCCTTCATCTCTAAGGTGGGGACGAAGCCCGCCCTGCAGGGTGGTAAGGGCAGGTGAGACGACCTGGGCGAGAGGATGGCGCCTTTGCGGGGTTCGCACACACCAGGTGCTCTCGCTACGTCTCACGCGGGGTCGACCCCGGCTTTTCTGCTGGAACCAAAGTTCTCCCGTGCCTCAAAAAGTTTTTGGTAGGGGGCGTGCAGGTGGTGACACAGCGCTTTTAAAGTCGGAAAAGCGCGGGGCCAAAGCCCCTACAGACGTCCGTTAAATTTGTCCCCACTTCCGGCCCCAGCGACAAAGCGCCCAACAGACGTCCGTTAAGCCCGTCCCCACTTCCGGACTCGGCGACAAAGCCCCCACAGACGTCCGTTAAGCTCGTCCCCACTTCCGGCCCAGGGAGGGCAGGTCAAGGGCCTGGGGGCCACCAGGGTCGACTGAGGCGACGAGTCGACACTAGCGGGCGTGCGGCCCGGTGGAACGCGGCTGTCCTGGCGAGGAGGGACGAGCTGGCAGTAAAGCCCTCCGAATCTCCCGCCCTCGGCGCTGTCGTGGTGGGGACCCCTGCCCGCTACGTCGGAGCCCGGGCACTTCAGACCCTCAATTCCCGGGCGCGGCCCCAGCGGGAGACGGACGGAAGGGATAGGTTTGCGTGGTTCTCGCGAGAACATCCTCCCCGGGGTCGTGCCGGCGGCCTCTCCCCACGGTGGGCGGGGCTGCGAAGCGGAAGGCGTAAGATCTGGGCCCGCTGACGATCACGTGACCGCAA TCONS_00005706 . 3' 24810 TCONS_00005706 . 3' 27719 EMBV3_05914 GGCATGCTGCGTCCCAAGGCTTTGACCCAGGCTGCTGAATAACGAAGGATCTCTGTTGGC Variant GeneID:616375|ROBLD3:NM_001034791:224_cdna 79^119 2 EMBV3_33651 GeneID:616375 3 GENE ROBLD3 MAPBPIP MGC127161 roadblock domain containing 3 EMBV3_22062 TTCTGATACTACCTCTCCTGAGCTTCGTGAGCATCTGGCACGGAAACCAGTATTTCTCCC Gene GeneID:518504|SIN3A:XM_002696631:170_cdna Constitutive 0 NULL GeneID:518504 21 GENE SIN3A NULL SIN3 homolog A, transcription regulator (yeast) EMBV3_38838 GTGACACCGATGAGATACAAGATTACTTGCAACAGCTCACAGGAGCCAGAACGGTACCTC Gene GeneID:100297193|LOC100297193:XM_002695241:198_cdna Constitutive 0 NULL GeneID:100297193 18 GENE LOC100297193 NULL similar to glutaredoxin (thioltransferase) EMBV3_13324 CAAGAATGATGGCCTGCGCCCTGCCTTCTGTCTGCCAGACCTTTACTTACGGCGGATGCA Variant GeneID:616039|LOC616039:XM_002692340:144_cdna 125^195 2 EMBV3_27881 GeneID:616039 13 GENE LOC616039 NULL similar to Pancreatic trypsin inhibitor precursor (Basic protease inhibitor) (BPI) (BPTI) (Aprotinin) EMBV3_36189 AGGAGAATTCAACCTGAGTTCGGTCAAGATTCTCTGGATGGTCGTCAGATCCGTGTAGAC Variant GeneID:509771|RBM3:NM_001034363:51_cdna 582^809 2 EMBV3_17589 GeneID:509771 X GENE RBM3 MGC128854 RNA binding motif (RNP1, RRM) protein 3 EMBV3_26307 TCACTGGACCCTAAACTGGACATCCTGGAGGCAGCAAAGCCCTTCCTCCTAAAAGGACTA Gene GeneID:539345|ADCK2:XM_002687001:9_cdna Constitutive 0 NULL GeneID:539345 4 GENE ADCK2 NULL aarF domain containing kinase 2 EMBV3_28835 CTACCCTTTCACCTCTTTCATGACGATGTCCAATGACCCACCGCCCAAGGTGGGGCCCTT Gene GeneID:618353|LOC618353:XM_002693007:202_cdna Constitutive 0 NULL GeneID:618353 15 GENE LOC618353 NULL similar to mCG4182 EMBV3_06047 AGTGTTTAGCCAACCCAAATTACCTTAACTGTACCCTCAGTGTTTACACATGTTAGAGCT Variant GeneID:532868|MED31:NM_001077989:138_cdna 161^257 1 EMBV3_40110 GeneID:532868 19 GENE MED31 MGC148631 mediator complex subunit 31 EMBV3_38210 AAGATGAAGAGCCTGCTAAAGGGTCAGGGCTTCCCAGACTATGTGGCCCCTTTTGGAAAT Gene GeneID:510513|TCTN1:NM_001046056:117_cdna Constitutive 0 NULL GeneID:510513 17 GENE TCTN1 MGC133986 tectonic family member 1 EMBV3_11359 CCGGAAGCACAGGATTGCTCTTCAACCTGCCTCCCAGCTCAGCCCACTTTAAGAAAATCT Gene GeneID:613549|VGLL1:XM_002699589:83_cdna Constitutive 0 NULL GeneID:613549 X GENE VGLL1 NULL vestigial like 1 (Drosophila) EMBV3_20084 GATCAGGTAGAGGGATGAGAAGACGACTCAGAACCACCCATTAACTGCACGCATATGATG Gene BVT0102_112451 + 0 NULL GK000012.2:33116438-33155883 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036771 TCONS_00036774 TCONS_00036768 TCONS_00036773 TCONS_00036769 TCONS_00036770 TCONS_00036775 TCONS_00036772 1 XLOC_021229 Coding TCONS_00036770 XLOC_021229 Coding Coding WASF3 12:33154325-33201790 j TSS26694 4550 1 TCONS_00036770_3 501 10 0.904348558907804 0.00157705077786885 0.00112553697303496 3.06360191218098e-11 0.00175125414805091 0.00115714439729967 0.000535282513525613 1.56755289755301e-05 0.000951044615684576 9.57041590035829e-05 0.000550311491205629 2.48916255969521e-16 7.83617367062873e-09 0.000119092906310446 0.000249379081049585 0.000239778385411357 0.000467826584867853 4.71423887879525e-09 3.01732004007874e-13 5.53982293394642e-09 0.000904137569606603 1.17236535588038e-07 1.6601023472662e-20 6.1382269068827e-34 1.42798037601363e-05 0.00092139395569316 0.00307663554270294 0.000509783997235279 2.39451674802276e-08 4.61194093018825e-05 9.5480496279899e-11 XM_005213795.1 WASF3 PREDICTED: Bos taurus WAS protein family, member 3 (WASF3), 0.0 8152 100.00 0.993186813186813 NM_006646.5 WASF3 Homo sapiens WAS protein family, member 3 (WASF3), mRNA. 0.0 2316 82.27 0.512747252747253 TCONS_00036770_3 sp|Q9UPY6|WASF3_HUMAN WASF3_HUMAN Wiskott-Aldrich syndrome protein family member 3; 0.0 831 93.82 0.998003992015968 1 coding 1 1 1 1 0.0122658072094806 0.942293608596099 -0.0254160641991664 0.627508881156239 CTGCCTTCAGATCCTTGGAAGCTTGCAGAGCTTTAATTTTGATTGCTGTTACTACTGATACCTGAGCCAGTGGTGATGCTACCTAGGGGACATTTCTGCAACCCATAAGTCAGCAGCTACACGATCGTGAGTCATGCCCTTAGTGAAGAGGAACATCGAGCCCCGGCACCTGTGCCGGGGGGCCCTGCCGGAGGGCATCACCAGCGAGCTCGAGTGTGTGACCAACAGCACCCTGGCTGCCATCATCCGCCAGCTGAGCAGTCTGAGCAAACATGCTGAGGACATATTCGGAGAGCTGTTCAACGAGGCCAACAACTTCTACATCCGCGCAAACTCTCTGCAGGACAGGATTGATCGCCTCGCTGTCAAGGTCACCCAGCTGGATTCCACGGTGGAAGAGGTGTCACTACAGGATATCAACATGAAAAAGGCTTTCAAAAGTTCCACAGTCCAAGACCAGCAGGTGGTTTCAAAGAACAGCATTCCTAATCCTGTTGCTGATATTTACAACCAGAGCGATAAACCGCCTCCTCTGAACATCCTTACACCGTACAGAGATGATAAGAAGGATGGGCTGAAGTTCTATACTGATCCTTCCTATTTCTTTGACCTCTGGAAAGAAAAAATGCTACAGGACACGGAAGACAAAAGGAAAGAGAAAAGACGTCAAAAGGAGCAAAAGCGTATAGATGGCACAACCCGGGAGGTGAAAAAGGTTAGAAAAGCCAGAAACAGGCGCCAAGAATGGAATATGATGGCGTATGACAAAGAGCTTAGACCTGACACCAGGTTATCACAGAGCGCACACCACGGAGCGTCTTCTGAAGGATCCTTGTCCCCAGACACTAGGTCCCATGCATCGGATGTCACGGATTACTCGTACCCGGCCACCCCCAACCACTCTCTGCACCCGCAGCCTGGGACCCCTTCCTACGGAGCAGGTGACGCCCCGTCCCACGGGCCGGCAGCCCAGGCCCCCGAGCACGAGTTCCGGCCCCCGTCAGCCTCGGCCCGGCACCTGGCCCTGAACAGGCCCCAGCAGCCCCCACCACCCCCACCGCAGGCCACGGAGGGCCCCCAGGCCCCCGCACCCATGGCCCCAGCCGACTACGGGATGCTGCCGGCTCAGATCACGGAGTATTACAGCCCCTCAGGACCCCCACCGCCCCCGCCCCCACCCGTGATCCCCTCCGCACAAACTGCTTTCGTCTGCCCCCTCCAGATGCCCCTGCAGCCCCCCTTCCCAGCCTCCGCCGGATCCGCCTACGCTGGCCCTCCCCACCCTCCCTCCGGTGGGCTTGTGGTCACAGCCCCGCCGCCCCCAGGCCCCCCACCGCCCCCGCCCGGCCCTCCAGGTGCCGGCTCCTCGCTCTCCTCCTCCCCAATGCACGCCCCTCCGGGGGCTGAAGCCAAGAGGCAGGAGGCTGTGCAGCCGCCTGTCAGCGACGCCCGCAGCGACCTCCTCGCCGCCATCCGGATGGGGATTCAGCTGAAGAAGGTGCAAGAACAGCGGGAGCAGGAGGCCAAGCGCGAGCCGGTGGGCAACGACGTGGCCACCATCCTGTCCCGGCGCATCGCCGTCGAGTACAGCGACTCGGACGACGACTCGGAGTTCGATGAGAACGACTGGTCCGACTGAGACGGGCGCCCAGCAGGCCGGGCCGGGCCGGGGGGAGCGTGTCGACAATGTCAGTGGTCCCAGCACCCAGATAGTGGTATTATAATCCCGTAGCTTAGCCACTTTTGTATCAATAATGTGAGATTGCTTTTGCACATCCAAAACTTCTGGGTTTTTTCAGTATTTACTGTGTAATACTTAAGTGCCACTAAACATAGCAAACCGTGCTGCACACGAGGAAATAATGCTGTAACTATTGCATCGTCCTGAAAACAGCCTCTTGCTTCTTTCTCTCAGCCACAAACGCGTTTAGTGCTGTTTGGGTTCACGCTCCTTAATCATGAAAATCCTGCAGACTTGCTGTGTGTTTGTGAAGCTGCCTGTTGTCAGGTCTCTGCGAGATTCAGGACTGTGCGACAGACCAGTGTCTTCCGATCAGTAAGCGATACTGTTTTCCACTTTTTTTTTTTTTTAATGTGTTCAGAAGAAGTTGGTTCTCAAGAGAAAGATTTGACAAGTAGGAGACTCAGCTGTCTGAGCTTGCACTGTCATGGCTGGTGGCCTCTGTCTCTCTGGAGGCTCTGCTGAAGAACCTCATTTTCTCTGCTGACCTTGTGAAATATGAACTTGGCCCTTCTCAGGCAGGATCCCTCACGGGCGTTCATGGAGTCAGTGCTTGCTGGTGGTTTCTGTAGGAGGTTTCAGCAGCACAGTAGGAAGGAAAGTGGAGAACGGCCCTTTTTCCTTTGGTGTCGTCGGGACGGGGGTTGCACTCAGCACCCTTGGCGGCCTCTGGAGCTGGGGAACCAGCCCACACGGACCTGGGATCAGAGCCCGTACAACCTCTCTCCCAGAACCACGTCCCAGGTGGGCCCACGTGGAGGCCTTGGAGCCACAGAGAAGGCTCCAGGTGGCACCTGGCCCCAACTGATCTTGAGTTCTGAGAGCTTCATTTATGTGAGAGGAGACTGTCGCATCTTTTTCGCCTTCCCTGTGCTGTGGCCAGTTAGGGACCCAGCCCTCGAAGCACACGGGTTCCTCTTCCACTTGGTGGTCGGCACACCACCCTTGACCAAGTACCCCAGGGGAGGGTCGACCCTTCCTTGTCCCTTCCCACCTGGTGACAGGTGAGCCCCGAGCGGGCCTTCCTGTTCCAGACAAACTGCTAGGAAACTTGTGAATGAGAACTTAGATTCTGTAATGCTGGGTGGAGGTGAACTGTTTGTTTGAAAGAAAAAAACAACCCAGGCTTTAATCTCAGGTGTAACTTCACAGATGTACAAAGACACTTTACCCCCGAGCAGTTCTGACTTCTCTGCTGTGTGCAACTCGGGTCCTAGTGATGCTCAGTTGTGACCAAGGAATCTGTGGCTAAAACAGAGATGTTTGGGTGGATGTAGGGTGTCAGCAGGACCCTGACTGCTGGGGGTGGGGGGTGTGGTTGCTGAGTTCTCCCCAGGAAGCTGCTGCTCCACCATCACGTCTCTGTCCCTGAGGGACACACACGGGCTGTGGAAGGTCCCGGTCATCCTGTAAGGGCTGCCTGATGGGCCTTGAGTCCCCTGGGCTGGAACTCGAGAAGAGCCTCAGATCTGTATGACCCTTGTTTCCAAGCTCCCAGGCCAGGTTGTCTGAGTCTTTTCAGCTAGAACCAGCTGTTCAGGCGCATGCTTGTTGGTGCTCCTCACCACTTTGTGTTGCCTCTGAGTAGTTATAATGAACGCCTCAGTTCCTCTCTTTTAATTTCTCTTTTTCTCCAGTGCAGAGGCCAGCTATGTTGGCATTTTCTTGGGACTTTTACCAGTTGTGGTCATATTTTGTCTTTCTTTACAGTATTTTGTCTTTAGTGTTACTTTTGGATACAGAAGCACCTGTGTCCTTCTAGAACCTATGTTTGATAAATCTTCTTTGTCTCTTTTTTTGTAATGTCCCTTCTGTCCTCAGGATGGAGAGAATGCATAAAGCTACTATCCGTGTCAGGATTTCTTCTATTTATATCTTATCACAGTAAAATTAGTGGCACTTTATACATATTCATGAGCCTGTTAAGTATTGGTTGTCCTCCTGTAGTTTAATCAACAAGTTATTTTCAACTTGATGTTCTGACCAGTGAAAACGCTTTTGCTCTGATGTGTTATGTAGCCTCTAAGAGAATGGAAAAGGACTAAAATCCATTTTAGATTATTTTTCGCAGTATTTTTCTCAGCACTGATTTATTCTAAAAATGAAATCCAGACTTTTTCTAATACGATAGCACACGAAAAGGAAAAAGTGACTATTTTGAACTGTCCATTTTCATTTTCAAGAAATATTTACGAGAGAAATGGAGAAAAACATTTAAATGCATACTTCCTATCTATGGATTTTACATTTTAAAGTAAGCTCTATGTTGTAAGGTTATTTTTTTGTTTAGTCTAATTTCTTACAAGCTTTTTCTCATGTCATGGATCAGGTAGAGGGATGAGAAGACGACTCAGAACCACCCATTAACTGCACGCATATGATGTAGTCAGTTTTCTGTTGTTTAGCCCTAAAACCATAAGATTTGGTCACTTATGTTTTTCTTCAGTAAAAGTATACTGTTGGAGAATTAGCATTTTCATTTCAGTAAAATTTTAGAATGTCGAAATCTTTTCTGAGCACCACGTGGCTAGATTGTGAAAGTTTTGTAATAATTTGCAGCTGAAATTCACGATACATTTTCATCCATTGAAGACTCATGGGAATGTATCAGCCAGAGTAGCAAGTAATTTTTGTTTTCTAAACAAGAGTCTGTCACCTTGCAGTATTACCAATGCTGTTGTACACTGAATTTAAAGTGGTATTAAAAAAAAAAAAAACTCCTGGTAAACAATTTTTATCTGTTTGTATATCTTACTATAGATTATGTACAAGTAACATCTAAATAAAATTACACTTTTAACCCTAAACA EMBV3_36825 GCTGCTGTCAAGCTGGCTGATTTTGGCCTAGCCATCCTCACAACCATGCTTGTCTCCAGG Variant GeneID:282162|CAMK2G:NM_001097564:239_cdna 419^844 2 EMBV3_32605 GeneID:282162 28 GENE CAMK2G NULL calcium/calmodulin-dependent protein kinase II gamma EMBV3_05839 AGAGCTCTTTATACGTTTGAACCCAGAACTATGCAGTCCGATCATTAAGCAATGCTGAGG Variant GeneID:281961|OSTF1:NM_174409:29_cdna 215^719 3 EMBV3_31843 GeneID:281961 8 GENE OSTF1 MGC137137 osteoclast stimulating factor 1 EMBV3_40646 CATAGAATAAGATGTCTTTCCAAGTTGAAGGAAATCTTTTGTTGATTATATTCGTGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02982 CCAGAGGTGGTGCGCTGTTTACAGAATCTTCCTTTATTCCTCATCTGGGTTCGCTGTGGC Gene GeneID:517405|JAG2:XM_002696794:521_cdna Constitutive 2 NULL GeneID:517405 21 GENE JAG2 NULL jagged 2 EMBV3_37604 CTAACACTGACCTTCTCTATGGGTCAGGGACAGGCTTCATATCTCTACGAAGGTGGCCTC Gene GeneID:281603|ADCY7:NM_174230:32_cdna Constitutive 1 NULL GeneID:281603 18 GENE ADCY7 NULL adenylate cyclase 7 EMBV3_12937 TGCCTTATGACTTCTCATTTGGAAAGCACCAGAGGGCACGCTAAGGAACGAATGAATCAG Gene GeneID:507579|TTRAP:NM_001105341:59_cdna UTR3_Alt 2 NULL GeneID:507579 23 GENE TTRAP NULL TRAF and TNF receptor associated protein EMBV3_28574 CACTATTTCTGTGACGTGCTTCCCCTGCTCAAACTTGCCTGCTCTGACACCGTCCTCATT Gene GeneID:509884|LOC509884:XM_002693548:179_cdna Constitutive 0 NULL GeneID:509884 15 GENE LOC509884 NULL similar to olfactory receptor MOR228-3 EMBV3_03569 TGAAAGTTACAGGCACTGAAGGAGCAGTGTTCGGGCACTCTGTTGAGACACCGCACATCA Gene GeneID:616741|LOC616741:XM_002698683:22_cdna Constitutive 0 NULL GeneID:616741 27 GENE LOC616741 NULL similar to Zeta-sarcoglycan (Zeta-SG) (ZSG1) EMBV3_07830 CAGAACAAGAACCCAGAATATGCCTTCAGTCTGTGCAAGCCCAGCCAAAGTGTGAATCTG Gene GeneID:768084|ZSCAN12:NM_001077138:40_cdna UTR3_Alt 3 NULL GeneID:768084 23 GENE ZSCAN12 MGC139538 ZNF96 zinc finger and SCAN domain containing 12 EMBV3_13205 AAAGGCCAGAGTACTGTCCTAAGATGCAGTTGTTTGAATTCACTGGGGGGTAGGGAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03256 GGCTGCTCTTTCCGAGAAGCCAAACCTCCTGGGAAGATCGATCAGATGCAATTTTTAACT Gene BVV0102_395381 + 1 EMBV3_24964 GK000011.2:88179954-88328995 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025862 1 XLOC_014841 Coding TCONS_00025862 XLOC_014841 Coding Coding MBOAT2 11:88208290-88446394 = TSS18660 3537 1 TCONS_00025862_7 638 14 0.985203882353435 6.92298007217264e-05 8.90052966775662e-09 7.19027016852987e-09 1.31007275945583e-18 2.80693235148977e-14 7.28692599331474e-16 9.7120307418863e-20 7.22268061347658e-10 7.7827488691715e-09 2.17857474642059e-05 7.20713604460731e-23 9.48884893526081e-150 2.15597432917722e-18 6.60905873478813e-11 1.06001902699575e-14 0.000130684631089067 3.30304029257712e-18 6.19795069239614e-10 1.54422887407215e-17 6.89867325442591e-09 8.13531264343879e-10 8.0666432533534e-05 0.000152586628031867 2.87943764771289e-09 6.20102669941857e-09 8.60601992988497e-14 6.39085848515858e-05 1.03580200764763e-21 1.14577522968868e-12 2.69641962408421e-09 XM_001253490.5 MBOAT2 PREDICTED: Bos taurus membrane bound O-acyltransferase domain containing 2 (MBOAT2), mRNA. 0.0 5607 100.00 0.878710771840543 NM_138799.2 MBOAT2 Homo sapiens membrane bound O-acyltransferase domain containing 2 (MBOAT2), mRNA. 0.0 2774 80.51 0.877297144472717 TCONS_00025862_7 sp|Q6ZWT7|MBOA2_HUMAN MBOA2_HUMAN Lysophospholipid acyltransferase 2; 0.0 924 90.10 0.774294670846395 1 coding 0 0 0 0 0.00944643680115353 0.93308182418607 0.0184577978031068 0.689958788428068 ATGACAAAAGCCAGTGAGATGGAGACAGATGCGGTCAGAGGACACAGCTGGCGCTCTGGCTGCTCTTTCCGAGAAGCCAAACCTCCTGGGAAGATCGATCAGATGCAATTTTTAACTGATGAATTGCTGTCGAAAGCCCATTCATTAAAACACACTTTCACTGCTGATGGAGTCATAAAATCACAGAAGCCCCAGCAGCAGCGGGGGGAGACGCTGTCCCTGGAGGCCCCGGATGGCTCTCAGTGTCCCCCAGCAGCCCTCCTCTCGCCCGAGGACTTGGCTGAGTGGCAGAGCGCAGGGCTGGCCCTCCTCGTGGTCCCCACCACCCCCAGGGGTGTCACGGCCACAGCCAGGATCATCTTTGTGGTCACAGAAAAGCGGTCTGCATCAGCAGCCACTGGTCTGTCCCCTCTGGGGAAGAGGCCGATGGTCAACTTTGTAGTGTGCCAACTCTTTGCCTTGCTAGCAGCCATTTGGTTTCGAACTTACCTACATTCAAGCAAAACTAGCTCTTTTATAAGACATGTCGTTGCTACCCTTTTGGGCCTTTATCTTGCACTTTTTTGCTTTGGATGGTATGCCTTACATTTTCTTGTACAAAGTGGAATTTCCTACTGTATCATGGTCATAATAGGAGTGGAGAACATGCACAAGTACTGTTTCGTGTTTGCTTTGGGATACCTCACAGTATGCCAAATCACTAGAGTCTATATCTTTGATTATGGACAGTATTCTGCTGATTTTTCAGGCCCAATGATGATAATTACCCAGAAGATCACTAGTTTGGCTTATGAAATTCATGATGGGATGTTTCGGAAGGATGAAGAGCTGACACCGTCACAGAGGGGATTAGCGGTCAGGCGCATGCCCAGCCTTCTGGAATATTTAAGTTACAACTGTAACTTCATGGGTATCCTGGCAGGCCCGCTCTGCTCTTACAAAGACTACATCACTTTCATCGAAGGCAGATCGTACCATATGACGCAGTCAGGTGAAGATGGGAAAGAAGAGATACAGTACGAAAGGACAGAGCCATCACCAAATGTTGCAGTTATTCAGAAACTCTTAGTCTGTGGACTTTCCTTACTGTTCCACTTGATCATCTCTAAGATGTTACCTGTGGAGTACAACATTGATGAGCATTTTCAGGCCACAGCTTCATGGCCGACCAAGGTGATCTATCTCTACGTCTCTCTTTTGGCCGCCAGACCCAAGTACTATTTTGCATGGACATTAGCCGACGCCATCAACAATGCGGCAGGCTTTGGATTCAGAGGGTATGACAAAAACGGAGCTGCCCGTTGGGACCTAATTTCCAATCTGAGGATCAAGCAAATAGAGATGTCAACAAGTTTCAAGATGTTTCTCGATAATTGGAATATTCAGACAGCTCTCTGGCTCAAAAGGGTGTGTTATGAACGTGCCTCCTTGAGTCCCACCACCCAGACCTTCTTCCTCTCTGCCATCTGGCACGGGGTGTACCCGGGCTATTACCTGACCTTTCTCACCGGAATGCTGATGACGCTGGTGGCGCGAGCTGTGAGAAATAACTTTAGACATTATTTCATCGAACCTCCCCAGCTGAAATTTTTGTATGATGTTATAACATGGATAGCAACTCAGATAGCAATAAGTTACACAGTTGTGCCATTTGTACTTCTTTCTGTAAAAGCTTCACTCATGTTTTACAGCTCCTGGTATTACAGCCTTCACTTTGCTTGTATCTTAGTATTATTGTTGTTGCCGGTGAAAAAAACTCAGAAAGGAAAGAGTACACATGAAAACGTTCAGCTGTCACGATCCAAAAAGTTTGATGAAAAAGACAATTCTTTGGGACAGAATAGTTTTTTCAGAACAAACAGTGTTTGCAATCAGAATCAAGAAATAACTTCTAGACATTCATCATTGAAGCAATGATGAGGAAAGCACTCTGATGGCTATTTTCTGTATGTTAAGGGGAACCAATCTTAGCACCTTTCAAGGGGTCTGTGTCTGTTGGGGAAGGGATCACATGGGGGGAAATCAGCCGGTTTTAGGTAGGCAATTCCCTGTATACCAGCTTGGAAATGGGGCGAAATACCCCTCCCATGCCATGTCTGGTGGGCCACGCCTTATCGAAAAATATTTCCATTATTTCAGTGGGCACTCAGGACCTCAGCATATGTCCGTAGGGTCGTATGTGTGCCCTGTTGCTGAATGTACGCTGTGTGTCCCAAGGCACTGAGAGAGGGAAAAATAATCGTGTCACTCCGGATGACTGAGAAAAATTAACTTCTCCAAATGAATGTCTTGCCTTAAACCCTCTATTTCCTAAACTGTTGTTTCCTAAATGGTCTTTTCAAGTGTGGCATTGTGTGAACGCTCTTTCAGTATTTGCTGTTGTGTGCTGCACAGGAATTCCAGAAGAATTTGAACAGAATTATTTAAGATTGTGGATACTTTAAAATGCAATGAACATCGCAGTATTGGAAGGGTTTTCCTAAAGTTTCTCAGATGACTACAGTATGTAGCAGAACTGTAAGCAGTGGTGGATGCCAAATTGTAGGTAGTTTATTTTCCTGGAGAATTTGATCACCCTGTGTCAGTGAGAGAACCCTCAAGGAAGGATTCCTTAAACATAATAAAAGGTTGGTGATGTGATATTTTAAGCTTATTCTTCTTCTTCAAAAAAGAGAGAAGATGACAAACGAAAGAAGGAAGGCGTGAATGAAGCGCTGCACCTGGCCCGTGGCACCTGTGTTTGTACACACGCCTGCACGTGGCATGGGTCCGAGGCTCAGTGGAAGTGCTCTTCACCCCGATTTACCTGAGTTGTGTGTGATCCTGTAAGACATAAAAGTTTAATAACTTTATAATCACGTTGGATTTTTAAGAGATGTATCAAACATAAATTATATAGAATTATAAAAGGATAATGAAAGTAATAGCGGGAGATTGCTTAAAGGCTTTGAAAGAGACATCATTGAGTGAAATTACTGTCTAGCGATTCACTTTTTTAATCCTTGAACAGTTGAATTCATATTTGGTTACGTTTTAGGAAAACAGAAACTTCAAAGCCATTGGATCTGAGCCACCTTTGTAGAGAACAATATAAATTAATTTCTAAACTCGTTTATCTTCTCTCGTGAAAGTTTTACCGTTAACTCTCGTTAACGAGTTTCAGATTCTTAAAGCAGAAAATGTGCTTTTTATCTTACAGGCCATTTTCACCGTAATTCATTTTGCCTTCAGTGGCTGGGTTCCTCCTTTGATCCCACAGTCTTATGATGCTTCAGCAATGAAAGCAGAGGAGAGGGTTGTGGTGCCAGCTTGGTATCAGGGTTCCGGTGGCCCAGGGTGATGAATGATGGGCCGACAGGGAGAAGGATGGGCAGGGTCTTCTGACTTCAGTTTTCTGTGACCCTTCTTTTGTGGAATTTATTTTCTTTTTTGCCTTAAATTTTTAAATGAAATGCAAATTGTCTATCTATGATGAGTCTCTTTTTTTTCTTCCCTTGTCATTAATAAATTTGCAAATGAAAGTTAATGACAAAACAA EMBV3_09717 GCTAAGAGAGTAGGTTTGGATGTGTCTTATCAAAAGTAAAACAAAGCAAATTTATGTGTG Gene BVV0102_311562 + 0 NULL GK000020.2:30118949-30286785 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23207 CGAGGATTCTTGTCTGTTTGCTCCCACAACCTTTTCTGAAGGATCCAGGAGTTCAGCCTG Gene GeneID:538855|SLC16A13:NM_001076132:144_cdna Constitutive 0 NULL GeneID:538855 19 GENE SLC16A13 MCT13 MGC139592 solute carrier family 16, member 13 (monocarboxylic acid transporter 13) EMBV3_38715 GAGTCTGTGTACTGCTTGTCTTTTGTGCTTGGCTGGCAGGGTTCTTAAACATCTTCCCAC Gene GeneID:787991|LOC787991:XM_002687477:325_cdna Constitutive 0 NULL GeneID:787991 5 GENE LOC787991 NULL similar to olfactory receptor Olr1012 EMBV3_06401 CTGTCCAAGAAGTTCAGGGCACATGCTCTTCCCCCTGAAGGCGGATTACACACCGAATTT Gene GeneID:523107|RASGEF1C:NM_001103259:22_cdna Constitutive 0 NULL GeneID:523107 7 GENE RASGEF1C MGC142868 RasGEF domain family, member 1C EMBV3_11224 GCTCCTTTGAACCTGATGGGGGAGGCCATTTGTATTTAGAAAATGCTCTGTACATTGGGG Gene GeneID:618512|HN1L:NM_001081546:309_cdna UTR3_Alt 3 NULL GeneID:618512 25 GENE HN1L NULL hematological and neurological expressed 1-like EMBV3_25113 GCAATTCTCTAGGGGAGAAAAGTATTATCATCTCTAGGTTACAGGTGAAGAAGTTGAGGC Gene BVT0102_147021 + 0 NULL GK000016.2:39738767-39843493 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32440 CTGGGTTCAGGTGCCGCGCAGCTCTCGCCGCTTGGCCGGACTGAGCGAGTACAGAACTGC Variant GeneID:615677|CPNE1:NM_001076940:1300_cdna 100^228 1 EMBV3_40170 GeneID:615677 13 GENE CPNE1 MGC143186 copine I EMBV3_23183 GGTAGTGATTATGACAAGAAATATATCCAGGACACCATTGCAGTGGCTGGATTTGTTGTT Variant GeneID:511292|POT1:XM_002686916:142_cdna 212^376 2 EMBV3_07379 GeneID:511292 4 GENE POT1 NULL POT1 protection of telomeres 1 homolog (S. pombe) EMBV3_35649 GGGCACTGGTATATTAAGGACCCTCACACCCCTAAAAGTCCAAGCCCATCATCTGTCACG Gene BVV0102_195871 + 0 NULL GK000011.2:98609976-98612578 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029035 TCONS_00029036 1 XLOC_015648 Coding TCONS_00029036 XLOC_015648 Coding Coding DPM2 11:98610836-98615670 = TSS20279 2619 3 TCONS_00029036_6 105 4 0.458928201944962 0.00238200965206998 0.000240577700497418 0.000458568463861427 6.98133123326776e-08 0.000289654092920297 0.000875316739371849 0.000411475555167099 4.35945312126592e-09 0.000857137143586581 4.32970779976225e-06 0.000112729211653917 0.000148090707133338 5.31934594090454e-08 0.000564764379324999 0.000146872566417145 0.000297621469718224 0.000472773656307298 1.60515458940269e-08 0.00128322675072547 0.00145628690240731 0.000754564056876585 1.59793576079391e-05 0.00056633646059796 5.32208115656163e-05 0.00173309984206062 0.00207791146231625 0.00224689966838302 0.000130643176401771 2.09751179712189e-08 1.30631953519664e-05 NM_001046268.2 DPM2 Bos taurus dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2), mRNA. 0.0 1510 99.88 0.320351279114166 NM_003863.3 DPM2 Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2), mRNA. 8e-172 609 77.26 0.310805651011837 TCONS_00029036_2 sp|Q2KIN1|DPM2_BOVIN DPM2_BOVIN Dolichol phosphate-mannose biosynthesis regulatory protein; 2e-53 165 98.81 0.988095238095238 1 coding 0 0 0 0 -2.38369333707457 0.00658924311972246 -0.0741035470425393 0.149492741358081 GGGCCCGGATCCGGAACCAGATGGGGCTTGCGTCTCCAGTACCTGAAGCGCCAGGGAAATGGCCACGGGAACAGACCAAGTGGTGGGCCTCGGCCTCGTCGCCCTTAGCCTGATCATCTTCACTTATTACACCGCCTGGGTAATTCTCTTGCCATTCATCGACAGTCAGCATGTCATCCACAAGTATTTCCTGCCCCGAGCCTATGCCATTGCTATCCCACTGGCCGCCGGCCTCCTGCTGCTCCTGTTTGTGGGTATATTCATCACCTACGTGATGCTGAAGAACCAGAACGATACCAAAAAGACTCAGTGAAGGCCCAGCAGGAATGAGGCTGCTGGCCCCGTCTCTGCTTCTTCTCCAGGGCAGACCCAACAAGGGTGCCCACAGGACCCATTCAGGCACTGAGGCCCCGTCAAGCCTGATTGCCCTGCAGACACCCCTGTGGGATGGAAGCTGTTCAGGACTCACCCCTGGCTGACCAGGGCCCCTGCTCCTCCTTCCAGAAGCCAGGGAGGAGAAGTACCTGGAAGTCTCCATCTCACCCCCATTCTGGCTCAGGGCCTGCAAGGTGCTGGTCCCTCTCCACATACACACACACCTCACCTTGACTCCCTCTCATTTTTCCCGCTGGGTTCTACACTTGCCTCAGTTTCCTTCTTGTCACATGATGGTGTTGGACTTGGCAGGTTCTGGGACATCACGTGACCTCTCCCCACATGTCCTGCTCCTCCACAAAGGCAACCTTCCCAGGTCTGACATAGCCCCAGACCCCACAAGGATTTCTGGACCTGGAGAGCCTAGAGGGAGGCCCAGCCCCCAGCCTCAGGGCTGGCCTGATGGGAGAGCTGAACAATAAACGTCGTTGTCTTCGTCTCAGTGCCGTCCCTGACCCGAGGTGCTCAGGGGCTGGGAGCTGGCCTCTGCATTGGTCTCAGATCAGGAGACACTGGTTTGTGCAGCGAGGGTGCCTTGGGTACCTCCTGGATTATCCCTGTGCTGGACACAGGACAAAGCAGGGGCCAGGACTGGTGTGGATCTGGCCTGGTGCAGCTCACGGCGGGGCAGTCTGGAGGCATGGCCATCTGCCAGACGTCACATCAGCCTTTACCTCGCCTCCACTGTGCCAGCCCAGCCAGTGGGCACTGGTATATTAAGGACCCTCACACCCCTAAAAGCCCAAGCCCATCATCTGTCTCGTACTCAGCAGCCCAAATTAGTGTGGCTCTGAGCAGAGGGCCACTGTGAGCCAGAGCAGGGCTGTTTCCACTGTGTTCCAGTTGACTGGTCCAGGCCTCAGCTCGAGCCCCTGGCAGTCCCACCGTGCCCCTCTGGGCAGCCAGCTCTCCCATTCACAGTGTGAGCCTCCACCCCTCACTTCCTTGGGCACTCTCTTCCTCCAGTTAGCAGAGGTGTCCCACCTGCCTCATTAGAGGAAAGAGCCCAACTGCAGGCACACCTGCCCTGTCCTTACCTATTCCCCTCCCCAACCTCCAGTCCAGGCGGAGCTGCCCTCCTGGACTCTGGGTCCTGTCCTCTCCCACCGCTGTGGCAAGAGCCTGCTATCTGATGATCCCTCTCAGGGGAACAGCCTCTGCTTCTCAACATGGTCCTCCAGTGTTAAATAAATGTGTTATAGGCTCCATATAAGGGACCCTCCATCAACTCATTAACTCCCTCTAGGTCTCTCCCTGTCTTCACAACCAAACTTCCCCAAAGGGTATCCACCTCTGCCCCCTGCGTTTCCTCTCCTCCCACTGTGCTTGGCAGCTTTCCAGGAGGGCTGCACTCAGACCACCAGTGATGTCTGGTCTACATCAGAGGCATGTTCCTTGACCTGCCACATTTGGCCAGTGACATTCCATCCCCCACCCCCACCCCGGGTACATTCTCCTACTTCTCTCTATCATATTCATGCTCCTCTCCTGCCGTGAGAGGTTAGGTTTCTCAGGACTCAGTCACAGGCCTCTTCACCCCACACTCTTAGGGGCGACCTTATCCTCACCCAGGCTTGCTTCCAGCCCAGCTTTCTCCTGAGCCCAAAGGTGTTGGATGTGTGCCAGCTGTCCCCCTGACATCTCCATCAGATGTCACAGACCTTGGCTTTCCTCTTCCACCCCACATCCACCAGACCCAAATCCTATCAATTCTTGCCATTTCCTCCCCCGCCCCAGTCACCTTCCTGATGCAAAGCCAGCATCCTCTGCCCTAAATCACCAAAAGTGTCCTCACTTCTCTCCCCACTCCCCCACAATGGCCCCCTCAAATCCAGCTGCATGACAACCAGTTACCTTTGGAAAACATTTGAGTTTCTTTTTTACTTTTCCTGAGCATCTTTCTCACACATTGCTTCTCTGGGTTCCCATCCCTCTCCTCCCATGGCTGACAAGAGCCTCCGTGCTCCCTTCTGAACTCTCCTCCAGCCATACTGGCCTTCCATTTCCTGGGAGTCACTGAGGTTCTGTGTACATCCTACTTGCACTGGTTCAGCATATACCAGTTTCTCAAACACCAGTTTGTGCCAGGTTACTGAGCCAGGAAAGGAGCCTGCCCTTCCTTGCACTCTGTGGGTGGGGGAAAGGGGGATGTAGTAAGTAAATGAACAAGACAGTCTCTGACAG EMBV3_27462 TCGTTAGTTGCTATGACTCTTTCAGCATTTGGGGCTACCTGATGTTTCCAGAGACCTGGC Gene GeneID:614909|IRF8:NM_001083769:432_cdna Constitutive 0 NULL GeneID:614909 18 GENE IRF8 MGC140338 interferon regulatory factor 8 EMBV3_15126 ATTGAAGAAGAATGTGGCATCACAATTGTCCTCAGACCATGACCGACTTCATACCTTGGT Variant GeneID:511479|MRPL45:NM_001035100:94_cdna 380^478 2 EMBV3_04700 GeneID:511479 19 GENE MRPL45 MGC127097 mitochondrial ribosomal protein L45 EMBV3_35435 GTTCCTATACTAATAGATGGTTCCCAAAACAGGGAGGCTCTGAAATGACTGCTGATGGCC Gene GeneID:541232|NDUFAF1:XM_002690796:243_cdna Constitutive 0 NULL GeneID:541232 10 GENE NDUFAF1 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 EMBV3_24864 AAAATGTGCTGCTGAGCTCTGTTTAGCCAGTACACACCCTCTGACCGTATTGCCACTGAG Gene BVT0102_173475 + 0 NULL GK000018.2:43466268-43532729 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086250 TCONS_00086252 TCONS_00086253 TCONS_00086251 TCONS_00086254 TCONS_00086255 1 XLOC_052096 Coding TCONS_00086253 XLOC_052096 Coding Coding CEP89 18:43485999-43568462 j TSS64220 2745 1 TCONS_00086253_4 771 19 0.966942349203269 3.29812422796327e-12 2.69183080416864e-33 4.05850067424727e-05 2.23988654387003e-09 3.80538796258868e-22 7.86884324916148e-06 5.62943738343749e-05 2.15140513231985e-05 2.64974823963758e-05 1.24428431726449e-09 9.1472340087152e-10 1.29101230531624e-07 5.88150191790269e-10 5.13112369820946e-05 3.88973057493991e-11 0.00179300950188461 3.31010303435035e-12 0.000397042962629892 0.000691068271023974 1.53031127420355e-09 1.00769820594045e-12 0.000320923216552189 2.36353248813966e-05 1.81589037424549e-08 4.15862305268316e-23 1.5555060433469e-09 3.42446163545244e-10 7.90308381390051e-05 1.90799557677911e-05 4.46165476920415e-06 XM_005219047.1 CEP89 PREDICTED: Bos taurus centrosomal protein 89kDa (CEP89), transcript 0.0 4754 100.00 0.959927140255009 NM_032816.3 CEP89 Homo sapiens centrosomal protein 89kDa (CEP89), mRNA. 0.0 2291 82.08 0.8408014571949 TCONS_00086253_4 sp|Q96ST8|CEP89_HUMAN CEP89_HUMAN Centrosomal protein of 89 kDa; 0.0 1071 75.19 0.997405966277562 0 coding 0 0 0 0 -0.0230843117557192 0.848321111177946 -0.0131744304210908 0.783369851419439 CAGATGTAGTTGTTGCGAAGTCCGTAGCCGAGAAAAGGCGTCTGGCTAGGCCAACTCGAGGCGTCGGCAGACTTTAGGGAGCGGTCCTCACCTCCGATCTTCTGTGCAGTCCAGTAAGGGTCTGGCCATCAACCACAGCAAGGATGCTCCTGGGGTTTCGGAGAGGCCACAAGAGGAAGTATAAACACATCATCCATGGCCTTCTCCCTGCAGCCAGCATCGCACCGAAGCCCGCTGTGCCCCGCACACCCCCTCCGCGCAGCCCCAACCCCTCTCCAGAGAGACCAAGATCTGCTCTGGCTGCAGCCATTCTATCGACAACACTTACTGGCCGGACCGTTGCCATTCCTCAGCCTCGCCGGAGAGCCCACTCTGAGAGCGACATGACCTCCATGGAAAAGGACAGTTTGATCGAGCCCTACGCCACTACCTCAGAGCTGAGGCATCAACCACACTGGCAGAATGAAACGGGAAGAAGATCTTCTCTGCCATCCTTTGAAATGCTGGGCTATGAGGAGGACGAGGACACGGACTCGCACCTGTCGTCCAGCCGCAGGCAGTCTGGAGACGCCAGCGCTTGCAAGGAAGAGGGAAGTCTCTGCGACGCCACGTATGCCACACCACACAGAAACCAGGTTCCATCGTCACACGGGGTGGACACTGAAGATGAGGAAAGTATTTCTGAACAAGATGGGTTTCCAGGCTCACCTATTCCACCAGAGAATACACAAGGAAAAGATGGAAAACATTCTGTTCTGAAATTAAAGGACGAAAAACCACCATTATGTGAAAAACCTCCACTCTGTCCAGATATAACTGGTAGAACACGTCAAAGATGTATAGAAATAACCAAAGAAAAGTTAGAGGAATTAAAGGAAGAAAATTTGCACCTAAACAATGCAAATCAAGCCCTTACACATGAGCTTAACATAATAAAGAAAACAATGAAAGACCTGCAGTTAAAACTTGAAAGGATGAAAAAAGAAAACGTGAAGCCAAAAGAGGTTGAGAAAGCATCCTCTCAGGAAGTAGTTGCTGCACCTGAATTACATTATCTAAGAAAACAAGCTCAAGAACTGGTGGATGAAAATGATGGATTGAAAATGACTGTTCATCGTTTGAATGTAGAACTGAGTAGATATCAAACAAAATTCAGGCATTTATCCAAGAAAGAGAGTTTAAATATTGAAGGCCTACCATCAAAGGGCCCTACACCACCCTGGTTGGTGGATATTAAATACCTGTCCCCCTTGTTGCTGGCCTACGAAGACAGGATGAAAGAGAAGGATGAGCTCATTGCCAGCCTTCAGGAGGAAATGAGAGTGTTTAGAATTCGAGCCCAAGAAGTGGTAAAAGAAAACGAGAAACTGCATCAAGAGCTGAATAAGAGTAGTCCCGTCACCAATGAAGAATGGCGGCAGCTTCAGACTCAAGCAGAACTGGTTTTAGAAGAAAACAAGTTGTTGATAGAGCAGTTGGAGATTCAGCAAAGAAAAGCCAAGGACACCCACCGGGAGCGTCTCCAGGAAGTTTCTAAACTGACTAAACAGCTGATGCTTCTAGAGACTAAAACACAGAGCCAAGAAAAGGAGCTAACTGAAAGTAAGGAGCAATTAGCAATTTTACGTACAGAATGCCAAGAACTACAGATACAGTTGGACAGCAAAGTTGCAATGGAAGTTCACACTTCAATTGTGAATGAATTTAAAAGCCAGTTGCAGAAAGAAGAAGAGAAAGAAAATGCTGAGATGGAAGAGTTGATGGAAAAGCTGGCAGCCCTGCAAGTACAGAAAAAGAGCCTGCTCTTAGAGAAGAAAAATCTGATGGCTAAAAACAAGGCACTGGAAGCTGAACTCGAAAAGGCACAGAAAATAAATAGGAGATCTCAAAAGAAAATTGATGTCCTCAAAAAGCAGGTGGAAAAAGCCATGGAGAATGAAATGTCCGCTCACCAGTACCTGGCAAATCTTGTTGGCCTGGCAGAGAATGTAACCCAGGAGCGTGACAACCTTGTGTTTTTGGCTAAATGTTTAGAAAGTGAGAACCATGGAGTTCTCAACAGAATGACAGAAGACAGTATTCGCTTGGGAAGGTTGAAAGAGAAAATTAAGGGGTACAAGAAGCAGATGGCACTGAAGCTGGACGACATGAATCATCATCTGACAGAGCAGCAGGAGGACTTTGCTAGCAAGTCAGCTCAGTACCAGCAGGAGATGAGGCACCTCCATCGGATGCTCCTGGACAAGCAGGACATCCTGGACAAGGCGCTGCAGCAGAAAAGAGAAGTGGAAGGCGAGCTGGAGGTTGTGTGGGAGTCCACGTCCAAGGAAAACCGGAGGATCCGAGAACTTCTCCAGGCCACTCTGGAGAGGACAGGCCCCTGGGAGAACACCAGAGTTTCTGAGGACCACTGCCTGGATGTTATCTCTCAGCAAGCCATGCTGGATGCTGTGACATGAAGCCACCGCCTAGCACCCTCCAGGGCCTGCAGGAGCCCTAGGGCCAGGGCCCCTGGGGGAAGAGCTCCACCTTACCCAGGACAGGGAGGGGTGGAGGGAGGGCAGATCCCACCCACCCCCGCAGGTCTCTTCTCCTCAGGGTCGAGGAGAAATAAATGGTCTCAGAAATTTAACCCAGGTTTTTACATTTTTCTCTATTTTAAAAATGTGCTGCTGAGCTCTGTTTAGCCAGTACACACCCTCTGACCGTATTGCCACTGAGCTGGACTCCACTGCTCAGGCTCAC EMBV3_40936 ACAGGACTCCCCCATCCCAAGCCCACTTTGCTGACGGACATGGGTACAGCCCTTTTCTTA Gene GeneID:281126|DRD2:NM_174043:11_cdna Constitutive 0 NULL GeneID:281126 15 GENE DRD2 NULL dopamine receptor D2 EMBV3_03784 TCTGCCTAAGCCAACTCGAAAAAGCCGTACGAAAAATAAGCAGAAACGTCCCAGGAGCCG Gene GeneID:505507|RPS7:NM_001098874:5_cdna Constitutive 1 NULL GeneID:505507 8 GENE RPS7 MGC165697 ribosomal protein S7 EMBV3_25881 GAAGGATTTACAGGAGCAGTTGAGGGTCTTATGTATTGTTTTTGGGTGGGTATATAGCTA Gene BVT0102_212348 - 0 NULL GK000012.2:36538024-36607560 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39292 TTCTCCTACCACTATGGACCCTTCCCTCTAGACTCTCACGTCTTCAGCAGCAAGAAGCCT Gene GeneID:100337422|LOC100337422:XM_002685167:173_cdna Constitutive 0 NULL GeneID:100337422 1 GENE LOC100337422 NULL single-minded homolog 2 long-like EMBV3_39684 ACAGAGATGTCTTTTGCCTTCAGGATGTATCAGGTCACAGGAGAGAGGAGACTGGTTATC Gene BVV0101_024842 + 1 EMBV3_08087 GK000007.2:41354611-41402839 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32667 TCTACACAAGGGTCTCCTTGGGGATGCACTGCATTGGCAGAAGGAAGAGGCTCCTGAAAA Gene BVT0101_017124 + 0 NULL GK000020.2:11943497-12139228 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113308 1 XLOC_069006 NonCoding TCONS_00113308 XLOC_069006 NonCoding NonCoding - 20:12060539-12063229 - TSS84792 2461 2 TCONS_00113308_6 100 0.0861438439658675 2 0.0855336556340647 0.000241891640570234 0.000364764991979859 0.000289143327566149 1.34971992838159e-05 9.02775721945159e-05 2.88856900046836e-05 0.000333783296936135 0.000167715254690808 2.24423434000744e-05 0.00022908872476822 5.78658857413403e-06 1.58135430177072e-27 3.79370932386013e-06 0.000314521844852401 3.128735091e-20 0 0 0 0.000135005548455986 0.00014540073365306 3.70060416127983e-06 0 0 0 5.91214167335279e-05 0.000186649196602977 0.000103115340364874 5.04747478355229e-11 0 0.00011726437895723 XR_138822.2 LOC100847572 PREDICTED: Bos taurus uncharacterized LOC100847572 (LOC100847572), 1e-60 239 85.20 0.0893945550589191 0 noncoding 0 0 0 0 0.0238970673612582 0.866853364166561 0.035245623553129 0.465531430324561 ATCACATTACCCCAAGGGCCTGTGGCGAGGCCAGAAACAATGCCGCTTGGATCCTGTTCATCCCTTCCTCTGTTTTAGCACAGCCCACAGGGCAGTGAGGCTCTCCGCTCTCAGGACACTGGTCCTGTGAAAGGGCTTGCTTTTTGCTGGTGGGAGAGTTACTGAAATTTAAGAGGTTCACTTGCCTCAGTGAAGAGAGGCCATGCTGCTTGAATAAATGATCCTTAAGCTCAGCATGTGATTCAGTGGAAGGCAACTGGGCTCCCCAACAAAAGCTCTAAGTGGTGCTTAGCAAGACAAGGCCCAAGCAGCACAATACAGTCGGGTGACTCATGAAAGGCTTTGTACTCACAAGCTTGGCCCGTCCTCTCTGCTCACAAATCACACACACACACACACACAGAAGCTGCGGATTACGACACTGAACTTCCCTCCTAGGTTACCCTGTCGACTCGTCGAGGGGCCTCACCCAGGTGTGAATGGTACGGAGCCGGCATGCCTCTGCAGAGATTGAAACCAAAGCAAAGCCAGCTGGAAACAGCTTCTGCGGGAGGACTTCCAGATCTGCATGGAAGGAAGGTGTGTGGACTGGAGTGAGCTGTCATGTCAGTATGCACAATGTCATCGACGGGTGCTGCCTTGCAAAGAATCATGCCCACTGCCCCCAGCATGCTGTCTGCCTGTGGGAAGCCTGAGATCTGTGAACTGAGGGAGCCGCTGTGGTCTACACAAGGGTCTCCTTGGGGATGCACTGCATTGGCAGAAGGAAGAGGCTCCTGAAAACTTGTGTGGTGTGGTAAACTGTGGTTGACTTGGCAAGGCTTCCCTGTATATGAATCAATGATATGTGTCACTCCACTCAATTAAAAAAATACTTCCAGCAGAATTTCTCAAATGGCTTGTAACAGTACAGATTTTGCATTTCAAGAGTCAGCTTTCTCTTGAAAGACTATGAGGTTTACCAATAATCATATAAAATCCCCCATATTACATATGATTTTTATTATGGCTATGACTGTATAACATCTAATAACCTTTCTCCTAGATGAAGAAAATTAATTGAATCTACTCATCTTCCATCTACTATCTTCTCAGTTTCAATGGGGAAAAAAAAAGAAAAAGTGGAAAACAAATTATTTTTGTTTTAAGAGAATTAAAATAGCTAAGAAAGTATGCCCTTCTATACCAGTAATGATAGACCCTGCCTGGCTCCTACAGCGGATACTGTTTCAAACATTATAACATTTTGTTGATGAACATGCCCAACTGAATTTCTAACCATTCATTTTCTAAATTGTACTTTTTAAAACTTGACAAGACTCGTTTGGTTACTGAATTATATCCTCTTCTGAATTTCTTCCTTCTGAAAGTTCTTTTTTTTTTTTCCTTAAAGGGATATTATCCTTGCTTTGCACAGTTTTCTTAATGGTCAGGTGTTCTCAATCTACTCCACAGCTTCACCATTTCTACTGGTTAATCTTCACATCTGAATCATGTATGTGCTGTGCTGTGTTGTGCTTAGTCGCTCAGTTGGGTCTGACCCATGAGGTCACCACCCCATGGACTGTAGCTCACCAGGTTTCTCTGTCCATGGGGATTCTCCAGGGAAGAATACTGAAGTGGGTTGCCGTGCCCTCCTCCAGGGGATCTTCCCAACCCAGTGATCAAAACAGGTCTCCCACATTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGGCCTAACGGTGTATGGTAAAGGCCAGTTTCACAAGCAAAAGGTATTGCCTTAGTAACAATTTACGAGAGAAGAAAACTGAGGATCTGATGTCAGAGGAGGTCTGGCTGAGACTCTGAATTTTATTCTGTGGTTTTCACCCTTTGATTTTTCTTTAAAAGGATCAAATGAGATACAAACCCAGGGGCCACAGGTCCATCCTTCTGAGAGGTGATAGTTAATGCCCAACAGACAGAAAGGACCTCATAATACAATGCGTGTTGTATCCAACTTGATGTTGGTCTACACAGAAATTCAAATACTGAAACCATCTTCCAGGGCCAAGAAGGAAAAAAAAAATTTTTTTTTTCAATATAGATCTAGCCAACATTAGGATATGTGTCATTTTTATTGTTACACTCGGTGTGCCCACAAATCCCAAAGCATGTTCCATATTAAGATTTTGGCTTCTATTAAGACCACAACTTTGGTATGGAAAGGCATGTCTCCTTTCATCTAAGTAGGAAAGAAAAACAAAGTAAAGAACAATAAAAAGCAATAGAGGCCTGAAATGTACCTATTTCTACTGATCTCACTAATCATTAATACTAATCTTTAATATTGAACTTCAATTGTTTTTTTACCTATTTCTTTTTACAAGAAATTCTTATGCCCTAAACACTTAATTCCCTTGGTCTCTAATAGTCTACAAGCTGCTTATGTTTTTGTTAAAAATCAGTAGGTTTCAAATTTCATGACCCC TCONS_00113309 s 5' 288949 TCONS_00113309 s 5' 291638 EMBV3_36956 CAACCTGCGGCAAGTGCTTCACCAAATCCTCCAACCTGCTGGAGCACCAGACGCTGCACA Gene GeneID:539756|ZNF648:XM_002694205:40_cdna Constitutive 0 NULL GeneID:539756 16 GENE ZNF648 NULL zinc finger protein 648 EMBV3_03487 TGCTGATCTGACCATCAAATCGCTGGCGGACATTGAGGCGGAGTACAACTACGGCTTCGT Gene GeneID:507199|FAM125A:NM_001034283:38_cdna Constitutive 1 NULL GeneID:507199 7 GENE FAM125A MGC127521 family with sequence similarity 125, member A EMBV3_15845 CGGCTGCTGCGCGCCTGACGGCTCTTGCAGATGAACACATCTGTACCACGCAGTCCCCCT Variant GeneID:540262|DLK2:NM_001083494:332_cdna 206^336 1 EMBV3_32541 GeneID:540262 23 GENE DLK2 MGC151582 delta-like 2 homolog (Drosophila) EMBV3_25025 GCTTGGGTTTTCCTTAAACTGCAGGGACGTCTGGCCCAATTGGTGGTTGTGTTAACTTCG Gene GeneID:664646|TAS2R42:NM_001046633:17_cdna Constitutive 0 NULL GeneID:664646 5 GENE TAS2R42 T2R67 taste receptor, type 2, member 42 EMBV3_08980 AAGTGTGCCTGTGCTCTGGGAAGGGGACATAGGAGTGACCGAGAAACCTTGATCCAACAT Gene GeneID:614957|PPCDC:NM_001034773:133_cdna Constitutive 0 NULL GeneID:614957 21 GENE PPCDC MDS018 MGC137871 phosphopantothenoylcysteine decarboxylase EMBV3_26324 TGGAGAACTACAGCAACCTTGCTTCAGTGGGGTGCCAGGTGGGCAAACCCAGCCTCATCT Variant GeneID:506859|ZNF317:XM_002688768:90_cdna 561^704 3 EMBV3_17887 GeneID:506859 7 GENE ZNF317 NULL zinc finger protein 317 EMBV3_14435 TGTCAAAACGCACCAGAATAAAAAAGGTGGTGGGACAGCTCTTGCCATTGTTACCTCCGG Gene GeneID:523019|LOC523019:XM_002707811:14_cdna Constitutive 0 NULL GeneID:523019 4 GENE LOC523019 NULL similar to Sp4 transcription factor EMBV3_23865 GCTGGGGAGATTGTGGAAGTGATAAAGGAGGTCACAGAGGATAAGGGCTGGTGGGAAGGA Variant GeneID:504513|C3H1orf113:NM_001162534:56_cdna 415^708 1 EMBV3_19503 GeneID:504513 3 GENE C3H1orf113 NULL chromosome 1 open reading frame 113 ortholog EMBV3_39294 GGCATTATGCAACAGCCATTAGCATCGTTGGAGCAATTTATGTCTTTGTCACCTGGTTGG Gene GeneID:509461|TMEM45A:NM_001075405:11_cdna Constitutive 0 NULL GeneID:509461 1 GENE TMEM45A MGC140063 transmembrane protein 45A EMBV3_31015 AGGAGAATGAAGCAGCAGTCAAAAAGATGCTTGTAGAAGCTACCCGAGAGTTTGAGGAGA Gene GeneID:509625|TERF2IP:NM_001075412:88_cdna UTR3_Alt 2 NULL GeneID:509625 18 GENE TERF2IP MGC140687 telomeric repeat binding factor 2, interacting protein EMBV3_38506 TGCAATGCTTCCTGGGCTCTTGTTCTTCCTTTGACACGTCCTCATATCGAGCCTGCCCAT Gene GeneID:510137|TMEM213:NM_001040513:613_cdna Constitutive 0 NULL GeneID:510137 4 GENE TMEM213 NULL transmembrane protein 213 EMBV3_18758 TCCCAGAGAAAGCTGTCCAAATCCTTGTTGAAGCACGGGAACACAGCAGGGAAATCTTCC Gene GeneID:782861|CPNE4:XM_002685089:43_cdna Constitutive 0 NULL GeneID:782861 1 GENE CPNE4 NULL copine IV EMBV3_12682 GAATGTGGGAGAAGTGAAATCCCAGTAACATTGCTTTCTTTCACACTTGCACTATAGTTG Gene BVT0101_030704 + 0 NULL GK000030.2:119061166-119102774 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245588 1 XLOC_150763 Coding TCONS_00245588 XLOC_150763 Coding Coding - X:118952362-118956507 - TSS184317 4145 3 TCONS_00245588_1 77 0.327382388419783 1 0 0.000970997735066287 0.000555216706564837 0.000525502270716444 0.000428859840490059 0.000683317864551417 0.000335390840071729 0.000320243228834991 0.000270802251720063 0.000419707926607864 4.13600312614471e-06 1.7830647721482e-05 9.89596065072636e-06 2.94964905219733e-05 5.19627774898513e-05 2.48080345012972e-05 2.82391890915881e-05 0 0 0.000936953075508277 0.000704674436863543 0.00028046116172402 1.70959485937966e-06 9.83679587798153e-07 0 0.00051370419112426 0.000755362074721785 0.000259906430371612 0 2.69131165828079e-06 3.10724942041851e-11 NM_001075135.1 UBE2D3 Bos taurus ubiquitin-conjugating enzyme E2D 3 (UBE2D3), mRNA. 3e-90 338 84.69 0.0735826296743064 NM_181888.3 UBE2D3 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), 3e-97 361 78.62 0.106151990349819 TCONS_00245588_6 sp|O15480|MAGB3_HUMAN MAGB3_HUMAN Melanoma-associated antigen B3; 3e-07 46.6 66.67 0.551724137931034 0 noncoding 0 0 0 0 -1.16109109614262 0.0477367021743026 0.0271494058541114 0.698876587267788 CTTTAGGGAAATGAACTGTCACAGAGAATAAACTGCCTTGATATGTATGGGTTGCCATTCTTTTCCGTAATTGTGATTTGCCCATGAAATGTATCATCCCCAACTGGACCTGCAGAATATTGTGCTGGAGGGTCCCTGGCGACATCACTAAGTTCCTTATTAATCCATTTCAGTGCCACCATCTGTGCTTTTTGTCTGACTCCTCACTGTCTCAGTGTGTACTCAAAGGTCCGGCCAAAACTCCTGATTATCTGGTGGCTGGGAAGGACTATCTCTTCATCTCACACTGGCTCTGCCAGGCACAGGTCCCTTCTTAATAAACAGAGAGGTTGGACTGGGGTGGGGTCACTGGCAGAGAGTAGATGAGGCTGGAGGGGAAGGGGAAACAAGCAGTGCAAACCCTTAGACTCAGACAAGCATCGAGTACCTGACGGAGACCATCCAAATTAGTGGCTTCTTTTTTATTTTTTTTTTTTCAGATATACAACCAGGAGTGCGATTGCTGGGTCATGTGTTAGTTCTCTTTTTAGATTTTGAGCACGCTCCTTACTGTTATCCATGGTGGCTGCACCAATTGATATTCCCACCAACAGTGTATAGATCTTGTCCACATGCTCACCAACATTTGTTACTTCTGTTCCTTTTGAATGATAGCCCTTCTGATAGGTATAAGATAATACCTCATTGTGGTTTAAATTTGCATTCATAGGACGATTAACGATGTTGAACATCATTTCATGTGCCTCTCAGCTATTTGTATGTCTTCTTTGGAAAAATGTGCATTTAAGTCTTCCGCCCATCTTTTTCTTGATTTTTTTTAGACTGTTATATCAACTGTTTATATATTTTGGATATTAACCCCTTATTGCTTACATCATTGGCAAATATTTTATCCGATATAATAGGTTGGCTTTTCATTTTGTTGATGGTTTCCTTTGCTGTGCAAAAGCTTTTAACTTTAATTACAACACATTTATTTACTTTTGCTTTTATTTCCCTAGCTTTCAGAGACAGATCCAAACAAATATTGTTATGATTTATGTCAAAGAGTGTTCTGCTCATATTATCTTCTAAGAGTTTTATGGTTTTCACTCTTATAGCTAAGTCTTTAATCCCTTTTCTGTTTACTTTTGTATATAGTGTTAGAGAATATACTGATCTCATTCTTTGAGAGCTACATATCAAAGAATGAGATTAGAGTGTAAATACAATTTGGTAGTCAGAAAATTAAATGTTCTTTTATATTTGAGCCAGTAATTCAGTGTTTTCAGAAATTAAATCTGAAGAGACATCCACAACCATATGAAAATACATAAATGTCCATGCACATGTTAATTGAGGGAACATGATATATGCACAGAGTGGAGTACTACAAAGCTATAAAAAGGAATGAGTACAATTTTGTAAACTAATATGGAGTGCTTCCATGATAGATATAGATATATAAAAGAATGTGGGAGTTTGGGGCTAATGTCAATGATACCAAGTCAAGTGCCTTCCCATTCTGGTATGAAGAGGCTTTGAGAGCTGAAGAAGACAGAGCCAGAGCCAGAGCTGCAGCCAGGGCTCCTATGGTGCCAGGGCCAGTGCACTTTCCTGAGCATGTCCAAATTTCCTCCCACCCCTAGTGAAGTCTGAGCAGATATTTCACATTGCATTTCAAGAAAGCAGGCAAACTTCCCACTAGTGGAGGGCCACGGTGGGGCTCATGGAAATTCAGCGTATAAGGTATTTATTTGTGTTCCAATACAATATGCACAAATTGGAGGTTTTTCTTTTTTCTGTTTTTAAATATTGTTCCTTTTAATTAAAGATGTGTTTAGCTTCAGATTCCAAGTACACTAATGGCACACCTCTGACATGTACTGCAGATTATCAAGTTGAAAACTAAGAAATTTCGTATTACATAGCACAGACTGAAATCCTTGAATCATTTCTTGTCATTCGGAACAAGATAACATGATATTGCAATATGGATTTTTTTTGTGAAAATGGAAATTTTTCCACAGTGAAGTCTGTGTGATTATCAGATACAGAAAAAAATTTTAAGAAGTATTCATTTCTTCGTCTGTTTTATTTGTTTAGTCTTTCTTTGTAATATTGAAGTTTATTTACCTGGATTGGCTTCGCTTATTTAAGAATGTGGAAGAAGTGAAATCCCAGTAACATTGCTTTCTTGCACACTTGCACTATAGTTGTTCAAATATCAATTTAGCATCTGCTCTTTGGAAGGCTTCTGGGTGGTTTTGGGGATGCTAAGAAAAATAAACTCAACCCCTTCTTATAGAATTCTAGTGTCTAAGAGCAGCATTCATCTAAAGTAGCTGGTGAACTGAGATCTAGGGGCCTGATAAAAATGAGGTGTAAGGAGGTGAGGGGATTGAGGGCTTCCTCATGAGGAGTCTAGTGTAAATACAGTGAGGCAAGGCACTTGGAGACTTTAGGACAATAAAAGTCTGGCAGTGGAAGGTAGTTTTAAGTTAGGCTACAGGGCGAGCCCACCAGGGAGGCTGTGGAAACACTGAATAGGGGTCAGACCCTCAGATGGCGGGTCTCAAAGTTGAGAGACTTAAGCCTGGAATGGAAAACTACCCCGAACAATTGCTTTGGAATTATGGGGCTTCCCAGGTGGCTCAGTTGTAAGGAACCCGCCTGCCAATGCAGGAGACATGGGTTCAATCCCTGGGTCAGGAAGCTGCCCCTGGAGGAGGAAATGGCTACCCAATCCAGTATTTTTGCCTGGAGAATCCCATGGACAGAGCAATCTGTTCAGTCCATGGGGTAGAAAAGGGTCAGATACCACCGAGTGACTAAACAGCAACACAAGTAGACCAGAGAGAAATCCCCCTAGGGAGGGGATGGAATGTGCCCTGTGCTCCTGTCCCAGTGCCCGTGAACACAGTGCACAACCTAGATGTTTCATGCATATCATCTCCAAGGAGATTCTGTGAAATAAAAGTAATAGTAGAATGAAACCGGAAACTCAGAAGCTAGTGGGCTAACACTCTTTGCTGTGAGTCGTGGAAACAGAGCTCATTTTATTGAAAGGGCATTCCATTCAGCGTTTTTGGCTACGTTGATAATTCCACCAAAGTCTATGAGGTGAGTCTATTTTAGGTGATGGTGAAATTGATGAAGATGCGGGCTTATTTTATTTAGTTACTTATGTATTTGGCTATGCTTGGTCTTACCTTTGGCACGCAGGATCCTTGATCTTCCTTGCAGCCTGCGAGTTCTTTAGTTGCAGCATGAGGAATGTTTCAGTTGTGGCATATAGGATCTTTAGGTGTGGCTTGTGAACTGTTAGTTGCGGCAAAGCTGTGGCATGTGGGACCTAGTTCCCTGATCAGCAGTGGAACCCGGGCCTCCTGCATTGGGAGTGCAGAGTCTTAACCCCTGGACCACTAAGGAAGTCTCTAGGAGTTGTTCAGATGAAAGAGCAGCCGGGAAGGAAGACAGAATTAGTCTCAGAATCAAATTTAGATTCTTCGAGTTTCATTCAGTTAAAAACATACCCCCACACTCAAAATACGATCTAGTAGTGGAAATGAAAGATTCTTTCTAAACAGCATTTTGGACTGATTTGGTGTTCCATGTGCTAGAATGCCACAGATTCTCTGACATCTCCTGGATTTAAAAGATTCCTCAGGGTCGGTGGTATCCTCCAGGATGAAACTATTCATAATCATAGTAAAAACAGATATTGTGTAAAGTCTCAGTGTGGTCCAGGCAGTGTGCCAGGTGCTTTAGCTACATGCCACTAGCCCTACAAAAGCCACTTCACCTGAGGCTCCCCGAGTTTGGGGATGGACCCAAGTCCACACAACTGATATGAGGCAGAGCTGGGACTAGAGCGCTGGTCTGAATTTAACCACAGCATGTACCCTTCCACTTGTCCCGATCTGAGGTGCTCATGAGTCAGTTAATTCACTGTCTTCTAGCACTTCAACATGTATCTTGAGTGACAGAAAGAAGGACTCTGTGATGAAAACACTGGGATGAAATACATAGCCAAGGCAATATAAACACCATAATAATTAAGAGGTGTGAATAAAGGGGAGAAGGGGGTAATGCTCAGTTAGCATATGATCACCTGCATGTGCAATTCAAACACCCTCAAGTGATCGAGGGCTTACAAGATTATC TCONS_00245587 s 3' 38366 TCONS_00245587 s 3' 38366 EMBV3_20295 AGATCCCAGGATTAGTTCATCAACCCAGAGCAAACATGCACATCTCTGAAAGCCAACAAG Gene GeneID:781721|C16H1ORF21:NM_001081547:132_cdna UTR3_Alt 2 NULL GeneID:781721 16 GENE C16H1ORF21 MGC155149 chromosome 1 open reading frame 21 ortholog EMBV3_16905 GGTGAGGCTAAATGATTGTTAACTCTGACCTTGAAAGGCAAGCTGTCTTGATCCAGTGGT Gene BVV0102_025869 + 0 NULL GK000028.2:29450346-29452160 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160530 TCONS_00160531 TCONS_00159464 2 XLOC_097678 XLOC_097423 Coding TCONS_00159464 XLOC_097423 Coding Coding FAM149B1 28:29399828-29452259 = TSS119484 4151 1 TCONS_00159464_3 491 0.018308841243074 14 0.92109479305741 0.00390633182175194 0.0030813521587981 0.00303450721228134 0.00282601315322661 0.00376471048680803 0.0012301336219612 0.00283349035574451 0.00301049073208302 0.00608872599886406 0.000590706359144957 0.000362524935948567 0.000309694526353082 0.00089603722477252 0.00107000502616426 0.0011080096220325 0.003939474733284 0.00129006157832005 0.00325692369131368 0.00474069246037306 0.00356263261722868 0.00134054888242471 0.00120994385100224 0.0017226538157032 0.00190144213051382 0.00375193913927727 0.00347709641981245 0.00227082888227224 0.000200853767506413 0.000262473246272396 0.000249079351443717 XM_005226424.1 FAM149B1 PREDICTED: Bos taurus family with sequence similarity 149, member B1 (FAM149B1), transcript variant X1, mRNA. 0.0 4482 99.92 0.599614550710672 XM_005269744.1 FAM149B1 PREDICTED: Homo sapiens family with sequence similarity 149, member B1 (FAM149B1), transcript variant X1, mRNA. 0.0 2920 78.59 0.829679595278246 TCONS_00159464_3 sp|A0JNF3|F149B_BOVIN F149B_BOVIN Protein FAM149B1; 0.0 1013 100.00 0.9979633401222 1 coding 1 1 1 1 -0.0424044660553228 0.751994708125306 0.00884467266466205 0.864121332741462 GTCACTTCCGCCCCCACAGGCAAGCCGGAAGACTAGGGAGGTGGGGACCCTGGGAAAGTGGCGATCTGGAGTCTAGGAAACGGGGCGTGACGGGGCCGGAAGGTGGCGGGAGGGGGTCGAGCCGGAGCGGGCGCGAGGGCCAGGCTTGGAGGCCCCCACCCTGGCTTGTCCGCCCCCGCCGAGGCTGAGGAGGAAGAGGAGGATGACCTCCAGATACACTAGGAAGGCGGTGCCACAGAACTTGGAGTTGAAAAGAATAACAAAACATGCTCTTAATCATCATCCTCTTCCTGAACAACTGGATGAAATTTCCTCTACCAATGACAGCCATGAAAAAGACCTAAGTTCCCAAAGTGAATCTGACATCACACAAGAATCACTTTTTACATCAGCTGACACTGGAAATTCAACATCTGCTTTTCCAAGTTATACAAGCACAGGGATCTCTACTGAGGGCAGCTCAGACTTCTCCTGGGGATATGGAACTTGATCAAAATGCCACTGAAAAAGTCCAGGCCATGTTCACAGCCATTGACGAGCTCTTGTATGAGCAGGAGCTGAGTGTACACACTAAAAGTCTACGAGAAGAGTGCCAACAGTGGACACGTAGCTTTCCTCATCTCAGGATTCTGGGTCGGCAGATAATCACTCCAAGTGAAGGTTATGGACTGTACCCTAGATCCCCTTCTGCTGTTTCAGCTTCACGTGAGGCAACACTGTCTCAAGAAAGAGATTCTACTATATTTGGCATTAGGGGAAAGAAGTTACATTTTTCATCTTCATATGGTCCTAAAGCATCTTCCATTGCCAAATCCCCTTGCTTGTGTTCTATGGAAAGAGAAGAAGACTGTATAATATTTTCTGAGGGAATAATAGAGGAATACCTAGCGTTTGACCACACAGATATGGAAGAGGAGTTTCATGGAAAGAAATCAGAAGCAGCTACAGAGAAACAGAAATTAGGGTATCCGCCCATTGCTCCATTTTACTGCATGAAAGAGGATGTCCTTGCTTATGTGTTTGACGATGTGTGGAGCAAGGTCCTAAGCTGTATGGAGCAGCTGACACGTACTCACTGGGAGGGATTTGCTTCTGATGATGAGAGTAATGTTGCAATCACCAGACCAGCTTCACAAAGCCCCTGTGTGCTGAGTGAACTACAACCTCTGGTCTTACCTCGAGTGCCACAGTCTAAGGTGCTGTCTGTCACCTCACATCCGATGAGTCTCTGTCAAGCAGCAAGTGGTCATCAGCCAAATGTGAATGGTCTCTTGGTTCATGGGATGCCTCTACAGCCAAGAAATCTCTCTCTAATGGACAAGCTCCTAGATCTTGATGACAAGCTACTTATGAGACCTGGGTCCAGTACCATCTTTTCAACTCGAAATTGGCCAAATCGAGCCCTGAAGCTTAGTACATCATTTCTGTCATATACAGTGCAGTCCGCCAGGAGACGCAACCCCCCACCGCGTACCCTTCATCCCATCAGCACAAGCCATTCACGCGCTGGAACACCAAGACTTATGGACGAAATACGCAGAGGATCCCGAGTCCCTGTGGCGGCCGACTCGCTCTCCTCTCCCTCACCACTGCCACTGAGTCGAAATAATCTGCTGCCACCTATTGGGACAGCTGAAGCAGAACACTTGAGCACGGTGGGGCCACAAAGGCAAACGAAAACCCATAGCGATTCCAGTCGAGCTCGAAGTGCTGTGGTGGATGAGCCTAACCATCAGCAGCCCCAGGAGAAGCTCCTGCTACCTGACTTCTTCTCCAGGCCCAATACAACTCAGTCATTTTTGCCAGATACGCAGTATCGTCGTGTGTGTGCTGCTGAGTATCCTCACCAGGCCCGACCTGGTAGGGGATCTGCGGGGACAGGTCCTCAGTTACATGGATCTACAAAATCTCAAAACAGAAGTGGACCAATCTCTAGAACCAGGCAGGGACCGTAGCACGAATGAGGAGAACTTGCTTCGGGCTGCAGGGAACACATGGGAAGATTTCACAAATCAATGTTCAGTCATCTCATGATGCAGACCTTGTATACAAGAGACAACCTGAAACCATCTTTGTGAATTATTTTGGTACAACAGACTGAGAACAGTATCAGCCAAAGACTACATGGGTACTGTTTCTATCTCCAGTTACTGTCTTCTGTTCAGCATAAGTTAATCACTTCACTGGACAGTAAAGTTTGTAGCCAAAGATGTAACAAATGAATAATTTCCTCCAAATCACTGCTCATGTTGTCTGTTAACAATGATCAGTTCAATTACTACAGCATTCTATCAGACTACGTGTACACAAAATGTAGCAAATCATTTGATAACATTATTATTGGCTTAATTACTTGTGTTAATTTATTTTAACATTATTGTGTTAATTTCTGGAGAGGTGTACTCACTTTTAAGTCATTTTTAGGAGACAGTTCCTTAAAAAACAGATGTGATTCCTAAATTTTTCTCTTAGATGTCCAAATCCATAGGCAGATATATATGGCAGGGATGAATAACTAAAAACATAAATGTTGAGCACTGGTATAAAGTAATCCATGTAATAAATAATGAATGTTTTTTTTCCCCCAGGTAGGACAATTCAGCCTTACAACAGCTGCCTGACATCAGGTTACACTTGTTTTCTTCTCAAAGTACTTTGGTGGTCATTTCCTACCCACCCCCTCAAACCCCTGCTGCCCCAAATATCACACCTGCCTTGCTAGATTTTCTCCTGCAGGTCTAAGAAAAGCAATTTAAAAATTTATAGAATCTTTCTGTTAGTGAGCCAGCAAGACACAACTTCTTAAAATTCCTGAAACCCTGCTGTTCTGTTTAGTATAAACATATACTAGAGCAAAGGAAGAGAACTTTGACATTCTTCTGATTTTCTGATTTGATATTCTTCTGATTTTCACATGGACCTTTCCCAAGTGCACTCATGAATGCAGCAATGGTTTTAACTATGGCTTAAACTTATTTAATTTCGTTGAATTTTAATTCTGATGATCATATTGGTTTTAGATCTTCTATTAATCTTCAGAGTTGATAAATTCAAATGATCATCAATTGGGATAATTTTATTGTTTCAAAGTGTTCTAATACTATCATATGAAGACAGATACAGCAGACAACCTGCATTAAACTGTATTTTTAATACAATTAAGAGTATTTTTTAACCTATTTGTAATCACAAACTGAAAACATGTCTTACGCTTACCTCAGATAAATTATGTACATGAATCTCAGTAACAGGAGGCTTGTTTTATGCATATGGTATTGAATATATTAGCTTACAAATCAGAGATTTTAAGTTGAACAGTCTCTAAAAAATTTTCATATATTCTAATGAACTCCTACCAATTCTACTAAATATAAATGAAAATCTCTGTACTATTCTCACAAATCAATACCATAAGTACATGATAACAAACCACTGGATCAAGACAGCTTGCCTTTCAAGGTCAGAGTTAACAATCATTTAGCCTCACCTTTTTATAGATGAGGAAACAAGTTCTGACAAGCTCAGTAACCTGACTCTAAGGACATTCAGCAGTTACAGAGGATTACAGCATCTCTTTATGGAACTTAAACCAGGCTATCTGCTACAATGCTGGCTAGAATTACTTTTCTTCTCTCCTTTATCCTAGGCACCATTCATATATTTAATAAATCATCTTTTAAATGATCATATTGGGATCACTTAAAAAGCCCTGGGAACTTAACAGTCATCTTTCACTTGATTATTTCATCTTGTACAATTCTTACAAAAGTGCTTGAAGTAATCTGAACACCTGTTTCTCCTATACACCTCAAGCAAAGAGTGCCAAACTTGGTTGAGGAGGGAAAAAAAAAGAGAGGACCTAGGCAAGAACATTAAGAGTGAAAGCAAACTGGCAAGTATTTGGAAAACAGATGCCCAGCAAGTGTCGAAGGCTAGGTAGAGCACATGTCCTAAAAAACACACACCACTGAATACCCTGAAGCTCACTCCTACGTGGCAAAATAACAACTGCTAAAAGTGGTAGGGACAGATCTGCATGCTAGAGAGTTCCTCATACAGGAGACACACAGAAGAGTGCTCTCGGGAAGCATTCCCCTCCCGCTCCCTCGGTGATCACCACCAATGCCTTCAGAGGAGGACCTCACAGAATG EMBV3_19898 TTGAGGCAGTTTGGAATTGGAAGGTACGAAGCACGTAGTTTGGGGCTGACTGGCACCGAG Gene GeneID:540332|CCDC85B:NM_001144087:86_cdna Constitutive 0 NULL GeneID:540332 29 GENE CCDC85B NULL coiled-coil domain containing 85B EMBV3_39128 GTGCTGAGAAGGTCATATTTACAGTTGGTGCTCACATTGGATTTATCTTCATCTTCTGTG Gene GeneID:535804|OXCT1:NM_001076070:80_cdna Constitutive 0 NULL GeneID:535804 20 GENE OXCT1 NULL 3-oxoacid CoA transferase 1 EMBV3_16022 AGGCATCAGACAGTTCATAGTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCC Gene GeneID:100299712|LOC100299712:XM_002695305:174_cdna Constitutive 0 NULL GeneID:100299712 18 GENE LOC100299712 NULL similar to zinc finger protein 347 EMBV3_27990 AGGCCATGACAATCCTTTTCCTAACCTGCAAGAGACAGGCAACTCGTGGTTCTCAGTGCC Gene GeneID:784812|LOC784812:XM_002707901:2_cdna Constitutive 0 NULL GeneID:784812 Un GENE LOC784812 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_26114 GCCTCTCCATTATCTGACCATCATGAGCCCACGACTATGCATCTCCTTTTTAGTGGCTGC Gene GeneID:512085|LOC512085:XM_002690769:539_cdna Constitutive 0 NULL GeneID:512085 10 GENE LOC512085 NULL similar to olfactory receptor 1306 EMBV3_16496 TATCTGGCCTTCTCATATATTTCCCACAGGAGGAACAGAAGCTACGGGAAAGTTTAAGGC Gene GeneID:100337328|LOC100337328:XM_002686679:81_cdna Constitutive 0 NULL GeneID:100337328 4 GENE LOC100337328 NULL notch1-induced protein-like EMBV3_01794 AGGTGTGCGTTCCGTGTGTGTGCTTGCTTGAAACAAACACTCAGCGTACACGTGTACATA Gene BVT0102_208598 + 0 NULL GK000014.2:9371283-9551696 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052693 TCONS_00052699 TCONS_00052690 TCONS_00052691 TCONS_00052697 TCONS_00052698 TCONS_00052694 TCONS_00052696 TCONS_00052695 TCONS_00052700 TCONS_00052692 1 XLOC_031561 Coding TCONS_00052690 XLOC_031561 Coding Coding PHF20L1 14:9523460-9591691 j TSS39056 5906 1 TCONS_00052690_7 969 19 0.913718305730617 4.11612367302775e-05 3.48104072885733e-05 1.33915205040453e-05 2.87678183118781e-05 2.59993886850509e-06 3.14981975165795e-42 6.27185425242309e-06 9.45537254341685e-06 7.31216961924149e-05 0.000329704313062318 8.43132999665753e-05 0.000121131204254308 2.13940229996758e-08 3.53825906058736e-05 2.75895642074574e-06 0.00316167009628399 0.00058554523894954 0.00101605420581228 2.52574674826844e-17 1.77652452244367e-06 1.40103775465278e-06 0.000468583735098023 0.00106036242119861 0.00165567739912855 3.211454160938e-05 8.24810037142729e-06 5.76614545520876e-05 0.000209275683614653 0.00029580224002451 0.000184788923758477 XM_005215331.1 PHF20L1 PREDICTED: Bos taurus PHD finger protein 20-like 1 (PHF20L1), 0.0 8325 99.91 0.782932610904165 XM_005250935.1 PHF20L1 PREDICTED: Homo sapiens PHD finger protein 20-like 1 (PHF20L1), 0.0 6823 86.39 0.982390789028107 TCONS_00052690_7 sp|A8MW92|P20L1_HUMAN P20L1_HUMAN PHD finger protein 20-like protein 1; 0.0 1724 90.39 0.998968008255934 2 coding 0 0 0 0 -0.00758137401108155 0.952846025159641 -0.0129356305954817 0.788114631352211 ACACATTTGGAGTTTTTTGAACTGTATGGAACATTTGCAAATGTATCCATCACGAATTGAAAAAATTGACTATGAGGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAGTCATCGTTATGATGAGTGGATTTACTGGGATAGCAATAGGTTGCGCCCCCTTGAGAGACCTGCATTAAGAAAAGAAGGGCTAAAAGATGAGGAAGATTTCTTTGATTTTAAAGCTGGAGAAGAGGTTCTGGCTCGTTGGACAGACTGTCGCTATTACCCTGCCAAGATTGAGGCGATTAACAAAGAAGGAACGTTCACAGTTCAATTTTATGATGGAGTAATTCGTTGTTTAAAACGAATGCACATTAAAGCTATGCCCGAGGATGCTAAGGGGCAGGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGCTGCAGCCAAGAATAAAACAGGGAACAAACCTCGAACCAGCGCTAACAGCAATAAAGATAAAGAGAAAGATGAAAGAAAATGGTTTAAAGTACCTTCAAAAAAGGAAGAAACTTCAACTTCTATAACCACACCAGAAGTTGAGAAGAAGGAAGATCTGCCTACATCTAGTGAAACTTTTGTAGGACTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTAACAAACAAGAGGAAAAATAATCAAGGCAACTCATTTCAGGCAAAGAGAGCTCGGCTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTGGATGGTGCTGAAAAAAAGGAAGACTACAATGAAACGGCTCCAATGCTGGAGCAGGCGATTTCACCTAAACCTCAAAGTCAGAAAAAAAATGAAGCTGACATTAGCAGTTCTGCCAACACTCAGAAACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATGCAAACATGAATCTGGAGATTCTTCTGGGTGTATAAAACCCCCTAAATCACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAATGATAAATAAAACTAGTCCTCCACAGCCTGTGAACCCCCCTAGACCTTTCAAGCATAGTGAGCGGAGAAGAAGATCGCAGCGTTTAGCCACCTTGCCCATGCCTGATGATTCTGTAGAAAAGGTTTCTCCTCCCTCTCCAGCCACTGATGGGAAAGTATTCTCCATCAGTTCTCAAAATCAGCAAGAGTCTTCAGGACCAGAGGTACCTGACGTTGCACATTTGTCATTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTCGGAAGTCACAACACCGCTAGCCCCAGATCCCTCTTATCATAATGAATGCCTCAGAGCAGAAAAGGAAGATACACAGATGCTTACAAATCTTTCTTCCAAAGCAGTGACTGACGCAAGAGGAGCTCCAGCAGCCTCAGGAATATCGAAAATGGAAAAAAAAGTGAAATTGGAAGAAAAAAGCTCAACTGCATTTGGTAAGAGAAAAGAAAAGGATAAAGAAAGAAAAGAGAAGAGGGACAAAGATCACTACAAACCAAAGCAGAAGAAGAAGAAGAAAAAGAAAAAGAAATCTAAGCAGCATGACTATTCAGACTATGAAGACAGTTCCCTAGAATTTTTGGAAAGGTGCTCTTCTCCACTAACTCGATCTTCTGGGAGTTCTCTGGCTCTGCGAAGCATGTTTACGGAGAAAAATACAACATATCAGTACCCAAGGGCAATCTTGTCAGTTGATCTTAGTGGTGAAAACTTATCGGACATGGAATTCCTGGACGATTCTTCCACGGAGAGTTTGCTCCTCAGTGGGGATGAGTACAATCAGGACTTTGATTCAACGAATTTCGAAGAGTCTCAGGATGAAGACGATGCCCTTAATGAAATTGTGCGATGCATCTGTGAGCTGGACGAGGAGAATGGCTTTATGATTCAGTGTGAAGAGTGCCTGTGCTGGCAGCACAGCGTGTGCATGGGGCTGCTGGAGGAGAGCATCCCGGAGCAGTACCTCTGCTACATCTGCCGGGACCCCCCGGGTCAGAGATGGAGTGCAAAGTATCGCTACGATAAGGATTGGTTTAATAATGGGAGAATGTGTGGGTTATCATTTTTAAAAGAAAATTACTCTCACCTCAATGCCAAAAAGATAGTTTCCACACACCACCTGCTTGCTGACGTCTGTGGTGTTACAGAAGTCCTGCACGGGTTACAGCTGAAGATCGGAATACTCAAGAATAAACATCATCCCGACCTTCGTCTCTGGGCTTGTTCCGGGAAGAAGAAAGATCAAGATCAAGTGGTTGCTGGGGTGGAGAAAAAAATAACGGTGCAAAACATAGTTAATGTGGAAGAAAAGAAGTATCATGTACAGAACCACAAAGAACCACCTCGTTTACCCCTAAAAATGGAAGGAACTTATATAACAAGTGAGCACAGCTACCAAAAGCCACAAAGTTTTGGTCCAGATTGCAAATCTCTCGCAGAGCCTGGGAGCTCAGATGATGATGATGTTAGTAGTTTTGAAGAAGAACAAGAATTTCACACGAGAGATAAAAACCGTTTACGATATCCAGTAAAAGAAGATGGAAGGCCCGGAAAGAATCCAGCTGAAAGGAATACAGTATTTGTTTATAATGATAAAAAGAGCACTGAAGACCCGGGAGACTCGCATCTTCAGTGGCAGCTCAATCTCCTTACGCACATAGAGAACGTGCAGAAAGAAGTCACCAGCAGGATGGACCTCATAGAAAAGGAAGTTGACGTTCTGGAAAGCTGGCTTGATTTCACAGGGGAGTTGGAGCCACCCGATCCTCTTGCAAGGCTGCCCCAGCTTAAACGCCACATCAAACAGCTCCTAATTGACATGGGAAAAGTACAGCAGATAGCCACTCTCTGCTCTGTATGACGGCAGTGAACACATGATGCAAAGAATGGGGCTCTGTTCAGTCGACTCGCTTTTATTATCCACATGGCTGCTAAGTGGATAGTTTAAAAGCTTAGTGATGTTTGGTCATTTACTGATTTGTGCCATCAATAGGATGGCACCTTGGAAAGGAAAGTGAAGAACAACTTTATCAGGGAAGCTAATGTTAAAAAGCATTCATGAGCTAGATACAAATGATAATGTGCCATATGCCCAGGGTCAGTGGAGGTAGATTAGAATCTATGCTGAGGGAATCAGATTGGCAGGATTTTTGAGTAGTTGCTAACATGAAACACGAGATACCTGTAGGAAGAAATATGGTGCATTCATATAGTTCTTAGTGAAAGATCTAAGTTTATAAACCATCATTTGGCCAAAACGAAAATTGTAGAGGAGATTTAAATTGTGGAGAGTTCTGTAAGGTTGTTGTAAGAACTGTCTTCTCTGCAGTTGATCCAGCTGCACTGAAGTCCAGAGTATTTAAACTTTTATGGGATCATGAACTGTTTCTTAGGTGATGAATGTCCTTAACCAGAAAACTGACAGTAGAAGTCTCACTTCTGAGGAAAACAGTTGTGGCATCCTTACTTCATTATGAATATATTTTAAAAACAGTGAAATAATTGGAATCCATTGCTGGCATTAGAAGGTCATTGTAAAAACAGAATGGCTCGCAGAATTGTCAGTGTGCCAAATAACGATACTGCTGGAAAGAGAGATTTAAATACTGTGGGAGTTCTCTCACCCAAGTCTTACATAATGCCATCAGTCCATCAGAGACGCGTCTATCCCATATACTATATATAGAATATATATAGTCAGAGTTCAGCATTCAGGTTTCAACGTACAGTTTGATCCTGAATGTGCTTGATATTTGCCTTCAGAAAAAAAAAATGTAAATAACCTCAGCTGGGATGAGGAGTGACAAAAATAACGAAATAGTTTGTGGCTGTGGATTTTTTTTTTTAAACTGCTGGTAGTGGAATACTGGAAAAGCTTCATTTCTGAAGATGAATTTTATTTTTAAAAAATACATGAGGCACTCAAAACTTGTAGCTTTGATCACAAATGGACAGATTTCTGAAACCAAAGGCAACTGAGTTGCTGCGTTAGCTCTTGCTGGGCCTCGGCCTGGCCTCCGTCTGCCAGTGCTCTTGCGCGCCGTGTGCCGCCCCCGCGCTCGCGCAGGTGTGCGTTCCGTGTGTGTGCTTGTTTGAAACAAACACTCAGCGTACACGTGTACATAATCGACATATTTATATCTACACATATCTAGTTTTATTACCATAGTCTATAAGAGTTGGTGGTTAACATGAAATGTTACCTTTTAACAGACTGTTTTTAAAATATTAAAAATGTTATGTATAGGTTTTGAAACTTTTTTAAAAAGGGGGGAGAAAAGACTGTTAAGAGGAGGCTATTTGATGACATGTTAACACTTGAATATTTTATGCCTCATCCTGTTTATCAGTTCTAGCAATCTGTATAAATGCATTTTAGAACTGATAGTCAACTTGAATTTATCTTTGATAAGAATACATGCCACTGTACATTCAGATATTATTTAAAACTGCAAACACACTGTTCTATATGTAAGGTACTGTATGTAAAACTCTTTATTAAAACAATTCCACATATCATAAAATTTCAGCTTGCCTTTTTGCAGCCTTATATTTTGATGTAAAGATGATTAAAAGAATGTGCAAAGCAGTAATTAGAAATTTTTATTGCCTTTTGAGATTCTCCAACTTGACACATGTGCCAAAGATCACAGACATAAAATACAGCCCTATGGATTTACTTATGATGCATTAACGTTGTCAGAAATCTTACTGAGAAATGAAAAGCTTTAGTAGAGGAGATACAAGGTAGTTATTAAATTTGAATATTAAAGTAAAAAAAGATAGTGCCTGTATTTCATGTGTGGAGTAAACTTTCTAATGTCTCTTTTTCAAGATCGATACTTTATCTTTTCATTTGTGTTTTAAAATAATGACCCTAATCTTTTCCCTATTATGGTTAAATTCTAGACATTTATCTGTTTTTCAAAATGGAACAAATAACATTCTTAACAGGCTGTAAACACCAGTGTTGCCCAGATTCTTGTCACATGCTCGAGGGACCTTTTGTGCCCAGTAACACTCATATTCTCAGCCCCTGATGACCACAGTTAAATTAATGTGCATTTTTTCTTGGGACATCTTAAAATTAGATCACTTTGATAGCCAGCTAGCTAAAAGTTTCATTAATAATTAGAATATTGAATTCTTGTTCTGCTTCAATGCATATGAATTGGGAGTCTGAAGTTTTTGATTTATGTTTTAAAGTAAATCTGTATTGAATTACTTGTACGCACATCTCCATTTATTAGTAATACAGAGTGTATCAACAGTTGGTTGAAGCATTTTAGCAACTATAGGCTGCTGACTCCTTCCGTATTTAGGTGAGTAAATTTGTTTTTGAGAAGTCAGTCCAGTATGAGAGGTTTCAGAGTTGGTTTTCTTTCCACTTAGTCTTACTTTAAAAAAATATGAGAGTATATATCTAAATATAAGCAGTAAACTAGGGAGGGTGTTTCTTGAAAAGGTGACTTTTCATTGCCACCCAGACAGAGTAGACAGACGTTGTAGGGAGAGATCCTTCTTAGTATGCTACTGATAAGTACAGTTTGTACTTCTTTATACTCATTGTGTGGTTCTGCTGACTTTCAAACTTAGAGTAGTGTACACTTTCCTTAAAGGAAATTGATTATTCTCATTATTTAAGGTGAAATCCTTTTTCCCACATTCACCTTGTTTCCACTGACTTACATCCTCTCAGATGTTCATATTCTATATTTTCAAGATGAAGGACCCCATTTCCCCTCCAGCCAACAGGATCTCCTGCCAGCTTCATTCTCTCTGCTGTCGCATCTTCTAAGAGCCCTGGGTGGAAACTCACAGCCCCCTCCCCA EMBV3_03391 GTGACAGGATCACATCGAGCTCCCTAGAAAGTCCTTCCACTTCCGAAGCCAATCCCAATG Gene BVT0102_172757 + 0 NULL GK000010.2:85420011-85431608 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022767 TCONS_00026072 2 XLOC_013437 XLOC_014916 Coding TCONS_00026072 XLOC_014916 Coding Coding - 11:98154151-98158459 - TSS18791 938 1 TCONS_00026072_3 116 3 0.782911539354539 0.000174060032690543 4.28503749662145e-05 0.000113455132194881 2.65591442537244e-05 0 6.48293407869441e-05 1.24343865025235e-05 6.3056694713433e-06 8.4116561170327e-05 4.82509716545653e-05 4.88101103310196e-06 2.28721713317518e-05 0.000230949895434829 1.5044782343972e-05 2.35372307126841e-05 0.00102774089192991 0.000176996703432013 0.0016049637613912 4.58695372007816e-05 0 0 0.000383691695685442 0.000748202540717756 0.0010455547345608 2.58524323120626e-05 1.5022316783141e-05 3.4355317637948e-05 0.000138240546403709 7.76321946992349e-05 9.61446390444517e-05 XM_005213213.1 GARNL3 PREDICTED: Bos taurus GTPase activating Rap/RanGAP domain-like 3 (GARNL3), transcript variant X1, mRNA. 0.0 1476 100.00 0.871002132196162 XM_005252267.1 GARNL3 PREDICTED: Homo sapiens GTPase activating Rap/RanGAP domain-like 3 (GARNL3), transcript variant X1, mRNA. 0.0 978 86.71 0.872068230277185 TCONS_00026072_3 sp|Q5VVW2|GARL3_HUMAN GARL3_HUMAN GTPase-activating Rap/Ran-GAP domain-like protein 3; 9e-51 174 80.17 0.991379310344828 0 coding 0 0 0 0 -0.362818117808552 0.0267777362204524 0.0538994871378079 0.299973335499791 AAATTCAGTCCAAAAATCTGTACAAGATTCCACTCAGAAACCTGGTGGGCAGAAGCATCGAGCGGCCTCTGAAATCGCCCTTAGTCTCCAAGGTCATCACCCCACCCACCTCCATCGGCATTGGCATCGCGGCCATTCCTGTCACTCACTCCTTGTCCCTGTCCCGCATGGAGATCAAAGAAATAGCAAGCAGGACCCGCAGGGAGCTGCTGGGCCTCTCTGATGACGGTGGATCCAGGTCAGAAGGAGCACCAAAGCCCAAGTCAAAGGCCCGGAAGCGGCTGGAAGAAAACCAAGGAGGCCCCAGGCCAGGGACGGTGCGGTCCACTAGCAGTGACAGGATCACATCGAGCTCCCTAGAAAGTCCTTCCACTTCCGAAGCCAATCCCAATGGGCGTTACCAGTCGACCAGCTCCGACCCAGACCCTGTGGCCGAGCAAGAAGGCAGCCCTGTCTGGGGCAGCTGCCCCTTTCAGCTCACCGCTTTCTCGGATGAAGACATGATTGACTTGAAGTAAACAGAGTCCCAATCGAGTTTGCCATGTTTAATTTTCTTACAGAGGTTTATACTCTTTAGCCAGTTCTGACATCATTTCTCAACAAAATGTGGCTTTTAGCCTGTCCATGATCTATTGGACCAAACCTTCTGCACCCTTGGCCTGTTTGGGTCACTCTCCAATGTCCGGTGCCATCTTTCTTGACCTTTATTTCTTTCTGTTCAGGAACCATCAGTTCCCTTGTAATAAAGTGGTAGATTTCATTGAGGTTTTAGATTGAAACTTTGAATAAATCAAAAATATTCATTCTTATTTACTGCAACCTTCTCTTATATTTTATATACTTAGATGGAAAAGTTATTTTTTCATTACAGTTTTGTTTTGTCACATAATTTGTTTCTTTTATTGAGATAAAGAAAAGCCATTGCTTTAAAAATGTAT TCONS_00028985 TCONS_00028986 r 3' 181 TCONS_00028984 r 5' 713 EMBV3_38476 TTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAACTGGGATAGATTTGGTCCCCAGGGC Gene BVV0102_231294 + 0 NULL GK000018.2:59749098-59859817 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125692 TCONS_00090404 2 XLOC_077234 XLOC_055185 NonCoding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_14153 TCAGAACTGAAGCAGCGAACTGGCTGGCAAGGAGTATCTGATGGATAACGCCCAACGGAA Gene GeneID:505876|NEK3:NM_001083643:41_cdna Constitutive 0 NULL GeneID:505876 12 GENE NEK3 MGC143098 NIMA (never in mitosis gene a)-related kinase 3 EMBV3_43667 GTGAAGATTCCAGAGAAGCCCGTGAACAAAAACCTGAGCTGGCTGGAGGAGAAAGAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10454 CTAGAGGACCGGTTCCAGCCGAACATGACGGTCCAGCCAGTACCGCTTTGCCCCTGGGAC Variant GeneID:282328|PSMB10:NM_001034040:51_cdna 662^813 1 EMBV3_43583 GeneID:282328 18 GENE PSMB10 MGC127213 proteasome (prosome, macropain) subunit, beta type, 10 EMBV3_30556 GGACTTTAGCATGATGTTCCCGCTGCCTGTGGCCAAGTTCGGGCTCATGGGGCACCAGTG Variant GeneID:530616|TCF7L1:XM_002689148:146_cdna 385^452 1 EMBV3_24517 GeneID:530616 7 GENE TCF7L1 TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box) EMBV3_34133 AGACATCCTCACACCCCCTGACTTGGAGAGAGTCTTTGGGCTTCCTGGGGGGAACATATT Gene GeneID:519120|PYROXD2:NM_001034532:153_cdna Constitutive 0 NULL GeneID:519120 26 GENE PYROXD2 C10orf33 C26H10orf33 MGC128628 pyridine nucleotide-disulphide oxidoreductase domain 2 EMBV3_03948 GGTTTACCAGAGCTTTCAACCTTGACCTGAAGGGAACACCTCCTCTGGAAGTGACAGGTT Gene BVT0102_304462 + 1 EMBV3_37068 GK000016.2:22055701-22391084 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42723 TGAAAGGGACACTGGATTGCCTGCCACAGGTTTTGGAGCTCTCTTTACTAGACACTCACC Gene GeneID:616736|C9orf135:NM_001079625:29_cdna Constitutive 0 NULL GeneID:616736 8 GENE C9orf135 NULL chromosome 9 open reading frame 135 ortholog EMBV3_04092 AGTGCTTAAACGCTCTCAAAAGCCTGTCGGCGAACGACAAGAAGACCGTTGGAGGGTCCA Gene BVT0102_433964 + 1 EMBV3_02436 GK000010.2:72299440-72413701 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11651 CTCCATTCTCCCACCTCCAACAAATCACCACAGCAAACTCCCTGGGAAGGGGCTTTTATA Gene GeneID:512928|CHRM4:NM_001103243:57_cdna Constitutive 0 NULL GeneID:512928 15 GENE CHRM4 MGC159876 cholinergic receptor, muscarinic 4 EMBV3_38561 GGGAAGGTGATGTGGCTGGAGATGACGATGCTGAAGAGCTCCAAGCTGCTGAGCACCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18738 GTGGCATTTGGGAGGAAATGACCAACCAGGCACAATAGGAAGGCTATTTAGGTTTGGAGG Gene BVV0102_000266 - 1 EMBV3_05418 GK000030.2:32719665-32834961 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28567 ACCTAGCAAGAAAGAACTAATCGCAACTACCTCACTGCTTAGTTCAATGTTCTCCCAAAG Gene BVT0102_236681 + 0 NULL GK000009.2:44377513-44546349 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37689 CGGATGGTGGTTGGAGAGGATAAGGCAAAAGTGTTGAATATCGTGAAGCCCAACATGGCC Gene GeneID:514330|LOC514330:NM_001079774:116_cdna Constitutive 1 NULL GeneID:514330 22 GENE LOC514330 NULL MMP37-like protein, mitochondrial EMBV3_11913 CGAGCACTGGCCCAGGAGATCCTACCCCAGGTGGACATCGCATCAGGGATGGCCATTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15979 AGAACATCATCGCCATCGCGGCCACCAACAACCTGTACATCTTCCAGGACAAGGTGAACT Gene GeneID:782110|PPP2R2C:XM_002688413:123_cdna Constitutive 0 NULL GeneID:782110 6 GENE PPP2R2C NULL protein phosphatase 2 (formerly 2A), regulatory subunit B, gamma isoform EMBV3_41374 ACTATGTGGCTTTGGTCAAGTCGCAGGCTCTCTGAGTTTCAAGTGTCCCACGTATAGGAC Gene GeneID:539145|OTUD5:XM_002700078:159_cdna UTR3_Alt 2 NULL GeneID:539145 X GENE OTUD5 NULL OTU domain containing 5 EMBV3_34321 ACGTGGTAGGTTCCAGTCCTGGGCCAAGGCTCCGTGCTAGATATTTAAGTTTAGGGGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12340 ATCATAGTTTGAACTCAGGCCACACAACAGGGAGGGAACACAGCCCTGCCCATCAACAGA Gene BVT0102_021758 + 0 NULL GK000027.2:22039686-22394248 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00195 AATGTTTATACCAAAGGTCACGCTCTGCAGGTGTATGTGTGATGGGTGCACAGAGGAGCG Gene BVT0102_038671 + 0 NULL GK000016.2:61886172-61897893 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073569 1 XLOC_045333 NonCoding TCONS_00073569 XLOC_045333 NonCoding NonCoding - 16:61889475-61895367 - TSS55413 5892 3 TCONS_00073569_12 124 0.0906313645621181 1 0 0.000484927508802015 0.000133024094496344 0.000185331238724945 7.04696777879342e-05 3.77075692856527e-05 8.74229514605295e-05 6.73041756952326e-05 0.000313871836969241 0.000246667390511845 0.000427021522113395 0.000421938670673589 0.000160821055437948 3.99323930989803e-05 0.000205979729860903 1.74864304026126e-05 0.00292266992500773 0.000670627734844379 0.00132864480074434 0.000294529219049421 0.000208712711771948 9.17108790247113e-05 0.00085012875657823 0.000763724758062188 0.00115946939515835 0.000139933556592185 0.000124957770109957 9.84479968890392e-05 0.00051514525527831 0.000402765546651389 0.000774490202222915 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 4e-116 425 95.82 0.0444670739986422 XM_005245088.1 ABL2 PREDICTED: Homo sapiens c-abl oncogene 2, non-receptor tyrosine kinase (ABL2), transcript variant X1, mRNA. 0.0 1196 72.13 0.367107942973523 0 noncoding 0 0 0 0 0.0233101109295235 0.857317255655179 0.0515888854046381 0.543642400028397 AAAACTGAAGACCAAGTCAAAGAAAACTAGAATGTTCCCTGTGAGGTTCTATACTTACTCCATTAATGTGGCTTTGGCTCCAAACATTTTTAAACTTCATTTGGAGCTGTCCTCAGAATGAACTTTGAGAGAATGAAGTTTCATTTTACAGTCAGCTCATGTTGGATAGATGGATGGACAGACTCACACACATCACTCATCTTACGTATCAGCTGGGCTCCAGATGATCCTCTGGCCATTTCCAAACTAATCCATCAGAGGATGAGTAGCCACACTCATAAAGGACCACTCGAAAGAATGTTCAGGGGATGCTTGCTAAAATCAGCTTCTTTACCTTACAGATACCATTATATATATATATAAAGAAATTATGCTTAAATTACCTATCAATTAAAATTATGGGAGAAACACTCCAATCACAAGCCTATATTGACAATAAAATATTGCAACCTTTATTTAAAATAAAACACAAGTTGGCAAGCCTTGTGAGACAACAGGCAGACAGCATTCCCCTTTCAAGGGTCTCATTATTTACATCAAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGGGTGAAAGTATTAAATTAGAAAAACGCAACACCTGAAAATATATTACAATAACAATTAAGAACAAATACCTGACAACACTGGTAGTGTGACCCATGATTGATGTGTTTTCAGTGAAATCCCACACTGCCTCACTGTGTCCCCTTAGCAACGCACCCAGGGGTAGGCCCTCCAGACCCGCTCCTCTGTGCACCCATCACACATACACCTGCAGAGCGTGACCTTTGGTATAAACATTAAACAAGTTTTAAAGAATCTGAATCATATGGTTTAAGGACAAAGTTCTATCAACCACCATGAAATGTTCAAACTTATTTTTGCCAAGCGAGCACAACACTGGAGTTTCTCCACTGATAGTCACTACAGAATTAAGATTGCAAAGAAAGGAAAGTGTGGGGTCTACCCAGGGGACAGGGCTCTGAGCATGCAGAGAGAGCTCAGCCAGCCTGTTCACAGCACACACACTAACCAGGGCACAGCTTCCAGTCACCACAGGGAAATCCGAGTAGCTCCTCCCACTCCCTTCCTTCTTAGCACGACAACAGTGTATGTACATAATGTGGAATCGCGTGTACCCTCTGCGCAGATCTGAAATATGGTGGTGTCCAAACATATGCCCTAAAGAACGGTAAGATGAGTACCTCATGGGTCCTTCCAGCTGCTGAATACTAACTTCTCTGAATGATAGTCTAATCAAGGTGACTTCTCAAAGTCTCAGCAAATGTCCTTCATGATGGAGTTCCAAGAGTGATCACAGTGAAAACCGGTTTGTCAAAACAGAGGAAGGCTGGTTATCGGGCCCTCATCTATTGGAAACATCTGTCTCGTGGCATTCTTGCCACTCATAACACATGGCACGCTACTTCTGAATTGTACAGAACAGTATTTGGATTCTCCACCAATAACTTCTGAATCGAGAATAAATTTGTTTGGCCTACCTATGTTATTACTGTGTTAGAAATGCTGAAAATTATCTTTTGATGTGAAAACTTTACTAGCCAGTAGTCCCATTCTCCAATTTAGAGTTTATAGTGCTTAATTACATGATTCAAAATGCCTATCCTGAGGCTTAGAGGCAAATCTAAGCAAGCTCCAACCAGACAAACTATGCATTTCCTTTCTAAAAGCCTGCTGGCATTTCACAATCTACCTCCCCCATGTCCTGAAGAGTTATTGAGAATTCGCGGAGACCTCAAGCCCTGTGTGTATAATAGCTCAGCAGCTTGAATGACATGAAGAATCCGGAAACTTGCTGCTTTGAGTATAATGATGAACAGAGAATCTCACAGAACAGACACAGACAGTGTGTGTTGGGGAGTCGGGGTAGGGGGGGAGCAAGGGGTGCTCCACGGCCCTTCAACATAAAAGGTGACATCCTTTCCCACAGATGGGCTGCAGGTTTGAAGATCTAAGCACACGTCACCTGTGACCGCGGGCTGAGGTCACAGGCCCTGCTGCTGTGTTCAGGTCACAGAGCAATGGGGAAGGGAAAGGATGTAAATTTTCTAGGAGAGGTCAACTGTTTCAAATTTGTAATAGTGCACTTGGAGGGTGGAAAGGGCCCAATTGAGAGCGTCTTCCCCCAGCTCACCAAGCAGGTGGAGAAACATGCAGCGTCTACCTAGCTAGCAGCCCATGTGGAGAGAACAGCCCACCGACTGTGGCTCTGAGCCACCGCCACCAGAAAGTTCGTTTCCCCCAGTTTTAGTTCAATAACCATGCAACATCAACCTGGCTGACAAACCCTTTCCTCTGCAAAACACACGAAGCCTGGAATCAAGATGCCCCACACTGGCCTCCTCACCTGGAGAAAAACACTGATGATCACCTGGGTGATCACAGGATGGAGTCTTCCCTAACTTCCGAGGGAGATGTGGGTCTAGGATGTGGAGTCAGAAGGAAAGGAAATCTCTTGCACCTTTGTTCTCTCAAGACAGAACACACACAGCTCAGGCAGGTGGTGTGAAAAGCAGCAGCCCCAGGGCAGAGACTGTCTTCTGGGACTCTGCAGTAAGGTCACAGAAGATAGGCTGGGGCCACTGGGGCTCAGATGCTCGGGTGCAGGGCTCCGCCCCTTCCACAGCCCCGAGAGCCTGCCCACCTGCTCCCCCAAGTCACAGGGAGGGCAGATGGCAGTGAACTTCTGGCTGTCACGGAGCTGCAACAAAGCAGGTAACGGTAATTGTCACTCCAGGCAACAATGCTGGCTTGCCAAAGAAAAGCCAGCCTTTACTTTTAAAAGTCTGGTAGCTGGAAAAACTGGAACTCCCTCCAAAGAATATAAATTCCCCACTGTTAAAAGAGTGGGACAAGCTTCCGAACCAGCCCAAGGCCTCTCCTCCCTGACTGGTGAGCTCTGGCTAGTAGAGATGTCCCTGGGCGGTCACATGGAAGGAACAGGCAACCCCAGAGCTGCCTTTCCCTATTTCTCGCCTGTTCCCACACGTCCCCAACTGAAGCAGGAGGTTACCAAAGAACTGAGCTACTGGCTTGACAGAAGCTGAGACAGAGATACAGACAGCTCAAGTCTATTAATACATAAGAAGAAATTTATGTCCAGAGACACTTACCTAAAGATGACTGGTCGTAACAGATGCTTGGGACACAGAGATGGCCCCTAAACCCAGGTAGAATGAGTTAATGCAAGCAAGATGATGAAACCCAAAAATCATCAAGAATAAAAACGCAGACAACCCTGTCAGCTCAGCGTAAATGCATCGGGGGTTGAATGCAGAGCCTGATGCTAACAGTGACATCAGGAGCAAAAATGGAAGGAAGTAGGAGAGGCAGGAAAGCAGTGAGCTACAACTCAGAACTGGCCACCAATCCAACTTCCTCTTGAGTATCTTTATAATTTAAGAGGTGAGTTACGTTCCGCTACTCCTTTAGGAGACAAGACAAAAAAAAAAAAAGGATGGTAAATGTCAAGCTCATCTATAATTGGTAGGAAATCCTAGAAAAGTAATTCCCAAAGTGCACTGGTTCTACAGCCATCCCCCCGCCCCCCCAAAAACAACAAAACTCTACAGGACACAGGTTAAAAAAGACACTGTCAACGTGAACAGGTAACGAGTCTGCTCCCACCATCTGTATTTAGGACACGAAATGGCTGAGCATGTGGTGGACAAATGTTCAGGGGTGAGAGCGCTTCACTCTTCTTGAGTCAAGGTCCCTGGAAGAGCTTCTTTGTTCTGGAGTGAGTACATGTTACTGAAGTTTTATAATTAAGCCAGGAAGTTGGTCCCTAGTTTTGGGAAGTTATTCGGCACTGAGTTACCATTTTAGCAAAACAGTTACTACACCTGCACGTACTCATTTAGCAGTTTCATACTTATAAATGTGATGAATCACAGAGCTGATTGTTTATATCTCTATTTTCGGGTCCCTTGCACACAAAACTTGTAAGTCAATCATCATTTAAACAGACATTTAGTGTCTAAATTACAGACATCTATGTAGACGTTATAGATGTCTATGTCTAAATAGACGTTAATAATACTTTATAGTTATATTACTCTTTCTCAAAGTGCTTTCATACATTATGTCAATTATTAAAATGATACGAAACAATAAAGTTTTTTGTTTTTAATTTAAGAAAAAGGAATGTAGGACTAGGGTTTTGTTTTGTTTTTTAAGTTGCTACTTCTTCATTACAAAGTGCAGATTGCTGTGTTGCTAAGGTCTGTCCAAAAGAATGACCCCATATAATTTTTTAAATTACTGAGTTCTACTGAACGCCTGCTTTGCTAGTGTAGCCATTACTTAACATTCAAGTCCCTTAAGGTCAGAGAGTGCCAGGAACGTGTGCTTTAGAAAGTATGCAGCACTGTGCAGACGGATTGTCCGAGTCACTTTTTTTGCAGTGTCTCACAAGGCAACAGGAACGGTGGCAAGACCCCACAATGAGAAAGTGAATTAAGAACCACACTCTGGCCTTGGCTCTGCCACTAAGTAACTGCTCTGAGCTCATGGGCAAGTAACTTCAACATCCTCTCCTGCCATTTCTTAAGCTGTGAAGAAAAAAGCTGGAGTGTTGCTACTGCTCACAGTGCTGGAGAGATTCTTGGAAAACACACTGGTTGAGACCTGGCCCCACAGGGAATTCCACAGGGTGAGGCCAATGAATCAGGATTTTTGTTGTTGTTTTTTTTTTTAAACTCCAGGAAATTTTGTTGCACATCCTTGGCAAAAGCTCATTGGATTCAGTGTTAATAACAGTAGTAGTTAACATTTGTGGAGTACTCATTACATGCCAGACACTCAAGCTAAGTATCTTACACACATTATCTCATTTAATCCTTACAACAACCCTGAGGTAGTTACTATTAGTATCCCTGTTTTCCAATGAAGAAACTAAGGCCGAGGAAGGTTAAGTGTGACTTGCCTTCTAGACTGGCTTTAGAGTCTGAACTCTTAATCACTTATCTAAACTGTATCCTTAAAGCCCAAAAGCTTTAAAAGCCTTAAAGCATGACTTTGTTAAATAAATATGGGTGGTGCCTTAACAAAGTCAGCATTTTATTAACTGGGCACTATTTTACCAGTCAACTTTCAGCTGAAGTGTACAAAAATTCTAACTTAAACCCCATAATTCAGCTAAAAAAGGGTCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTTCCTGGGATTCTCCAGGCGAGAACACTGGAGTGGGTTGCCATTTCCTCCTCCAATGCATGGAAGTGAAAAGTGAGAGTGAAGTCGCTCAGTCGTGTCCGACTCTTAGCGACCCCATGGACTGCAGCCCACCAGGCTCCGCCGTCCATGGGATTTTCCAGGCAAGAGTCCTGGAGTGGGGTGCCACTGGGTCTAGTGGAGACCTAATAACCTCAGTGTATAGAGGTCTCCTGGAAAAACACTGAATAAATTTCTCAGGACCAATTTTTTTTAAGGCTGTATCTCTGAAAGTCACAATGGACATCTGTAGGAAAATATACACATTTTAATTGTACATAAAGCCTTTTAAGAAAATACTTCATGTAAAGCACAAACAAGATGTATTTTACACAACACTGCATTGTAAGTTAGTAAATCTAAACTGAAATCATATTATCTGTACATGAGAAGATTCATCTGTGGTAACCCCAAAGGGATGCATACAAATAACCACTTTAGAAAGTTTTCAACACCTTGTAAAAGGGCTTTTGCTCCTGCTGTCTGCTTTGTTTTTAAACTATACAGAATTAAACTACATTTTTAGTTCCTAAAAGTAATTTTCTCTGCTTTGAATTCAAATGTTTAAATTTATATATG TCONS_00069864 TCONS_00069866 TCONS_00069863 TCONS_00069865 TCONS_00069867 TCONS_00069868 . 3' 104 TCONS_00069864 TCONS_00069866 TCONS_00069863 TCONS_00069865 TCONS_00069867 TCONS_00069868 . 3' 5995 EMBV3_19627 GGCGTTCCCTCTTCTAACCCACTGACTTGTATCTGCCTGTGGACAATTTCAATCCAGAAG Gene GeneID:532616|EPB41L3:XM_002697741:236_cdna Constitutive 2 NULL GeneID:532616 24 GENE EPB41L3 NULL erythrocyte membrane protein band 4.1-like 3 EMBV3_04728 CATGGATGGCAGGAGTAAACTGAAACTGTCCTGGGTAAAAGAGAACCCTACCTCTCAGTC Gene BVT0102_406627 + 0 NULL GK000029.2:26734929-26755551 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163391 TCONS_00164835 TCONS_00163387 TCONS_00163390 2 XLOC_099865 XLOC_100307 Coding TCONS_00163391 XLOC_099865 Coding Coding SAA4 29:26727583-26737523 j TSS122442 3179 1 TCONS_00163391_1 124 0.420887071406103 3 0.680450749572392 0.000641978166896858 0.000854695668196809 0.00122379706430074 0.000168662121942931 1.3126607445219e-05 1.14714453150229e-05 0.000294427376099977 0.000302027462227839 0.000172491850679312 0.00010853343779526 1.13272771938199e-05 1.58526066578654e-05 5.27791586788045e-05 0.000131126407082946 0.000701863223568744 0 1.04187683240876e-05 0 0.000268193442424946 0.000356319188265476 0.000219838289466778 0 0 0 0.000597651614778511 0.000234762934479418 0.000389153236815129 0 3.22772831555254e-06 1.88828930009988e-06 XM_005226742.1 SAA4 PREDICTED: Bos taurus serum amyloid A4, constitutive (SAA4), 0.0 801 100.00 0.139351997483485 NM_006512.3 SAA4 Homo sapiens serum amyloid A4, constitutive (SAA4), mRNA. 4e-75 288 76.01 0.136520918527839 TCONS_00163391_1 sp|Q32L76|SAA4_BOVIN SAA4_BOVIN Serum amyloid A-4 protein; 4e-68 205 99.00 0.798387096774194 1 noncoding 0 0 0 0 0.129664010751064 0.418018433863986 -0.0103751755657264 0.847370265250149 GTTTCTCCTTCCATGCTGATCTGACTCAGCACCCACCACGGGCTTCTCCAGACCCCAGGTCAAAGATGCTTTCAACCCAGCCTGTCCTTGCTGGTAGTGGGCAGCAAGTAGGACTTCCAAGGCAGCCAGGACTTCCAAGGGGGGCTTCAGACTTGTGGAGAGCCTACTGGGACATGAGAGATGCCAATGTCCAGAATTCAGGCAGATACTTCCGCGCTCGAGGGAACTACGAGGCTGCTCAAAGGGGCCCTGGCGGTGTCTGGGCTGCAAAAATAATCAGCAATGTCGGGGAGTACCTTCAAGGATTCTTATACCAGATTTACCTTGGAGACAGCTATGGGTTGGAGGACCAGGTGTCTAACCGGAGAGCTGAGGAATGGGGCCGGAGTGGCCAAGACCCAGATCACTTCAGACCTGCGGGCCTGCCGAAGAAATACTGATCCTGCTCCCTCTGTTCTGGAGGGACGAGGCTATGAGCCACACCATGCTTCTCCAAAAACAGGGAAATAGTGTCACTGAGCTCTGTCACCCCAGGAACTGAGACAGGTACCCAGAGGTGCCCAATAAATGTTTGTGGAACTGAACATGTTGATGGAAGCTGGAGTCTTCGAGTCAGACTCTGGGGAGAAAGGCCTGCTGGCACCATATGGACAGTTAAAGCTCTGGGGAGGACGAGCCTGTGACCGCAGGGCCCCAGGAATCCCTGGCGACCTGGACCCTGCCCTGTGCTCACACGACCCCATTGAGCCCCGGGACTCTCAGAACCCCATTTCTCCTCCTGAGTAAGCCTGCGCTGGGAGAGCACTGGCCATCACGCTGGGCTCCTCAGTGGCTGGGGCCTGACCCTGGCACACGCCTGGGCAGCCCCATCCCCACTTCTTCCGCCCCAGTCACTGTGTTGCTGCCTCAGGCCTCTCTGTGTCCCGACTCTCCACTGCCCAGCTGGTTGCATCCTGACCCACCTCACGCCAGGCCTTATCCCCAGGGATCTCTTCCCAAATCAAGAAGGCACATTTGCTTTGGGAAGACGAGTCCCATGACACCTGTTCTGGAAACTGCGTCTTAGACTCCAGTTATTTCTCATCAACACCAGAGCCTACCCCTGACTCAACTGTTAACTGGTCTCAGCTCATTTTATCTAAGAAATCATTCTCAGATGAGTTTCCCTTACCTTTATCCTCACTATCTTTGGGTCAAACAAAATGCTATTTTCACTTCTAGGGTGAATGTCAGTTATGTGGATACACACTTCCAATGCAGTTTAAGAGAAGCCTCCTCAGAAGCACAGACTGATGGCGAGCCAAACTCTGCTGGGGTGTGCGAAGCTGAGTCATTTTCTTTCATTGTAAATGTTCTAACTCTACACGTGCTATTTGATTTACCAGAAAGGCTTTGCAGGTCTCAACTGAAGAAATGAGGCTTGGAGATAAGTGATCTGGACCTTGCTCCAGGTCACACCTGTAGTAGGTGAGCAGCCAGGACTGCAGGCTGGTGTGTCTGACTCCAGGAGAGCAGGGATGTGTTTTTAAGACCGAGAGTTTCAGAGGCGGGGACTCTCTCCTCCACGGATCTCCAGCATGAGAGCCCTTGTGCCCAAGAGATGCCTGACTGGTTACAGACACACCATAGCTTGTTCTCCTCATGCGAACAGTGCCTTGCAGACTCCTTACCCTTGGTATCTGCTTCCTTAATAAATTCCCACATTGAAAACCCAGACTTCAGTCCACATTAGTTCTCACTCTTGAGCATTTTTCTCTTCCTTTTGTCTTCAAACTTGAAAGTGTGCTCACCTGCATGTCCTGCTTCCTCACTTCTGACTCACACTAGAACCCACACCAGCCTGACCTCTGTCCCCACCACTCAGCAAAACAGCTCTGGTCACCGCTGACCTCTATGGTGCTAACTGACAAGTTCCTTTTTCATACTAGGAAGGCTCTGAGACATGCTCAGCACAGTTGTCTTCTCCCTCCTTTCTGGTAGGTTCTCTCTTGGCTTTTGTTTACCCTACTTTTGTTTCCCTTTAATTTCCTTTATCTCCTTAGCTGAGTCTTTTCATCTCCCCAAACCCTAAGGGTGCTTCAGACTTGGTTCTGGATTCTTACTTTTTTTTTTCACTTTTTGTGTCTATATTCTCCCCAACAAGTGTACCAAATAGTATCTATATGCTGATGGTTCTGAAAAGGATACCTCCCTGCTCAGAACCTGATTTCCCAGATCTGTGTTTATAGACACCTCTGCTTGGATGGCTTCCAGAGATCTCACACTTGGTGTGTCCCAAAGGGAACTCTCATCTGCCTCCAGAACTCTTCACCCTCAGGCCTCTCCATTTCAGTAGATGACATCATTGTTCCTTCTGTTGCTCAGCCCAGAAATTGAGGCATGTCCTTGATGCTTCTCTTCCCTTTACCCCACACCCAGTCCACTAACAAGTCCTGTGATTCAACTTCCAAAATTCATCTCTAGTCCGTCAGCCTGCTCTCATATGCATCTCCATGCTCCTGGCCACACCATTTCTCACCTGGGTTTCTGCAACAGCTGTCTATCTAGTCTCCACATCTTCATGGTTTTCCCCTCTGCTTAAGTTGACTGTATAATTTTTCATCTAAACCAATTCACTTTCCACTGAGGAAAAGGGCCTTATTGTTGACTATACATGGATGGCAGGAGTAAACTGAAACTGTCCTGGGTAAAAGAGAACCCTACCTCTCAGTCTAGCATACAAATTATATTCAGATCATGTCTCTTCCCTGCTTAAACTCTTCCCTGGGTTCCCATTTCCCTCAGAATGTAATCTAGTGTGAGCTGTCCCTGGCCACCCTCCAGCATCATCTCATGCCACACCCTCCCAGGCTCCCTGTCCCTTCATCTCACCAACAAGCCAAACTTTTATTTGGCACAGGACCTTTGCATATGACATTTTCTCTGCTCAGAACACTCTTCTGCTTGGTCTTCACCTGACTGTGTGTTTCTCACCTGTGGAGCTCTCCTGAGATCACTCTTTCTTGAGAGAGGCCTTCCTGGTCACCCTGGCTGATCTACTCTGGTTATTCTGTACTTTTTGCCAATTTCAACATGTGAAATTCTTTTACTAATTTTTTGGTTTATTCTTCTGACTTCTTTTGGACTTTGTTTTGGTCCACATTCATCCCTTTTACTATAAAATCAGTGAGAGAAGTGAC EMBV3_09663 AGGAACCAGAAACCAAGGCTCGTGTCCACTCAGGCCCCAACAACAAAACTCAGGTGCCTT Gene GeneID:505862|TMEM143:NM_001037447:136_cdna Constitutive 1 NULL GeneID:505862 18 GENE TMEM143 FLJ10922 MGC128619 transmembrane protein 143 EMBV3_23336 TATCCAGGTCGGTAGGGGCCCAATATGCTACTGGAGATCAGTGGAGAAATAATTCCAGAA Gene BVV0102_186158 + 0 NULL GK000002.2:89589233-89699123 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164549 TCONS_00110694 TCONS_00022622 TCONS_00104659 TCONS_00006693 TCONS_00110370 TCONS_00029705 TCONS_00233479 TCONS_00010551 TCONS_00090383 TCONS_00164548 TCONS_00039144 TCONS_00104657 TCONS_00104658 TCONS_00164547 TCONS_00164546 TCONS_00175858 TCONS_00198560 TCONS_00033691 TCONS_00246552 TCONS_00164545 TCONS_00163173 TCONS_00137138 TCONS_00011402 TCONS_00186591 TCONS_00161834 20 XLOC_100256 XLOC_066596 XLOC_013292 XLOC_062436 XLOC_002255 XLOC_066274 XLOC_015964 XLOC_142961 XLOC_006102 XLOC_055164 XLOC_022962 XLOC_105637 XLOC_120214 XLOC_019924 XLOC_151020 XLOC_099814 XLOC_083348 XLOC_006953 XLOC_112643 XLOC_098719 Coding TCONS_00233479 XLOC_142961 Coding Coding - 8:91285910-91286492 - TSS174983 582 1 TCONS_00233479_2 169 0.874570446735395 1 0 0 0 0 0 4.24155557736928e-06 0 0 0 0 1.41391524976268e-05 0 0 0 0 0 4.53807316184148e-05 0.0114627985079881 4.31115304082583e-05 0 0 0 0 1.97037166125949e-06 8.64156025965256e-05 0 0 0 0.000165037750244233 0 3.44343942655281e-06 NM_174800.2 CFDP2 Bos taurus craniofacial development protein 2 (CFDP2), mRNA. 3e-93 345 79.05 0.671821305841924 TCONS_00233479_2 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 2e-45 159 64.84 0.733727810650888 0 coding AATAGCTGTTCATACACATTTTACCTATTCTGTGGAGCAAACTTTGTTTTTTAAGTCAATATTTGCTTTATCAGTATGAAAAGGCAAAAAGATATGACACTGAAAGATGCACTCCCCAGGTCGGTAGGTGCCCAATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAATGAAGAGATGGAGCCAAAGCAAAAACAACACCCAGCTGTGGATGTGACTGGTGATGGAAGCGAAGTCCGAAGCTTTAAAGAGCAATATTACATAGGAACCTGGAATGTGAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAGGAGATGGCAAAAGTGAACATTGACATTTTAGGAATCAGTGAATTAAAATGGACAGGAAGGGGCGAATTTAATTCAGATGACCATTATATCTGCTACTGTGGGCAAGAATACCTTAGAAGAAGTGAAGTAACCCTCATAGTCAACAAAAACAGTCTGAAATGCAGTCAGATCAGATCAGTCGCTCAGTCGTGTCTGACTCTTTGCGACCCCATGAATCGCACCACGCCAGGCCTCCCTGTCCATCACCAACTCTCGGAG TCONS_00226207 . 3' 17361 TCONS_00226207 . 3' 17942 EMBV3_29619 GAATCCAAGAAGTTTGGAGGTCCTGGTGCCCGTGCTCGCTACCAGAAATCCTACCGATAA Gene GeneID:513039|LOC513039:XM_002686574:32_cdna Constitutive 0 NULL GeneID:513039 3 GENE LOC513039 NULL similar to ribosomal protein S16 EMBV3_27592 GCACGTAGACCCCCCGTTCCACAAGAACAGGACAGGTGAGGTTGAAGGAGCCAACCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36481 ACCTAAGCCAGGAGGTGTTCTCCCAAAGATGAGGTTGTTTTCCAAAGAGCCTGGTTTCGG Gene GeneID:614576|BIN1:NM_001046541:45_cdna Constitutive 0 NULL GeneID:614576 2 GENE BIN1 MGC128846 bridging integrator 1 EMBV3_25956 GCAGCTACAGAAGACAAAAGCCAACAACAGGGCAGCAGAAGAAGCCTTTGTAAATGACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03291 CTGCAGCTGCGATCGCTGCGGTGGGTCCAGGTATAATTGAAAAGTGACCCTTTCTTCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41484 GGAGTGGAGTGAAGGGTGTGTTCTGCGCAGGAGGGACTCAGAGGCTGCCTCGATGCCTGG Variant GeneID:513795|ECHDC2:NM_001038536:52_cdna 310^546 3 EMBV3_19122 GeneID:513795 3 GENE ECHDC2 MGC134069 enoyl Coenzyme A hydratase domain containing 2 EMBV3_38130 AAGGTGTGCGGCAAGATGGGGCCGCTGAAAGGTCTGTGCAAGTCAATCACGAAGAGATTT Gene GeneID:404173|GNLY:NM_001075143:38_cdna Constitutive 0 NULL GeneID:404173 11 GENE GNLY NULL granulysin EMBV3_11323 CTGTTTGTGAACTGAAGTTTTTCATAGAGTCGTTTGTATGAGAGTGGATCATGGACCCTG Gene GeneID:537517|TLK1:XM_002685281:67_cdna Constitutive 2 NULL GeneID:537517 2 GENE TLK1 NULL tousled-like kinase 1 EMBV3_14957 TGCTGCAGACTTCTGACGGGAAGGAGATGGAAGAAGGCACCATCCGATACCTGGTGCAGC Gene GeneID:282143|APLN:NM_174503:2_cdna Constitutive 0 NULL GeneID:282143 X GENE APLN NULL apelin EMBV3_16895 TATCTCCAGCAGGTAGCTCAGTGGTGTTTAGTCAGCAGGGACGAGCCCAGAAACTTGAGT Gene GeneID:282271|PLA2G15:NM_174560:48_cdna Constitutive 0 NULL GeneID:282271 18 GENE PLA2G15 LYPLA3 phospholipase A2, group XV EMBV3_37638 TGTGCTTTTGGCTGTTAACCTGGATTTCTGTGAGGCCCAAACCATCCACCACTACACCTC Gene GeneID:506992|LOC506992:XM_002687330:159_cdna Constitutive 0 NULL GeneID:506992 5 GENE LOC506992 NULL similar to olfactory receptor MOR160-5 EMBV3_03052 GTATTGGACTCAGATAAGAGAATCACAGCAGCACAAGCCCTTGCACATGCCTACTTCGCC Gene GeneID:534492|MAPK14:NM_001102174:56_cdna UTR3_Alt 2 NULL GeneID:534492 23 GENE MAPK14 MGC142910 mitogen-activated protein kinase 14 EMBV3_14628 GCCCTCTTCTCATCACTGTACCACCATCCAGGGAACATACTATCCTGACACTATAGATTG Gene BVT0102_008124 + 0 NULL GK000010.2:25980841-26005737 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22992 TGAATACGTGGAAGTGACAGATGCTCACGATTATGACCGGCGAGCTGACAAACCTTGGAC Gene GeneID:514644|PHACTR4:NM_001102007:161_cdna UTR3_Alt 2 NULL GeneID:514644 2 GENE PHACTR4 MGC151764 phosphatase and actin regulator 4 EMBV3_41995 GGGTGAAGGGAGACTCAGATGAAGGTGATCAAAGGGTACACATTTCCAGCTTTAGGTAGG Gene BVV0102_012178 - 0 NULL GK000001.2:53680087-53729899 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003314 TCONS_00003318 TCONS_00003317 TCONS_00003315 TCONS_00003313 TCONS_00003316 1 XLOC_000832 Coding TCONS_00003314 XLOC_000832 Coding Coding KIAA1524 1:53724321-53754421 j TSS1710 6310 1 TCONS_00003314_5 588 0.14405705229794 19 0.790989733878202 0.000741704176967628 0.00184269684488846 0.000739271329003084 0.000236182599771357 0.000159753519517909 0.000233932608893035 0.000623476407256772 0.000592371567711913 0.00223171376886765 0.000287865811254879 0.000100022344867787 0.000148765002219657 0.000457677978442199 0.000866332541670074 0.00068251645585628 0.000472439441266107 0.00032086192825599 0.000857819618679426 0.000671537037127344 0.000832361444823216 0.000485833743343808 0.000410676168557436 0.000518314532913117 0.000646814334400198 0.000545278773541136 0.000281915692591602 0.000371691791280638 9.03196041175108e-05 4.19371219402328e-05 0.000141294613062934 XM_005201339.1 KIAA1524 PREDICTED: Bos taurus KIAA1524 ortholog (KIAA1524), transcript 0.0 8480 99.33 0.750713153724247 XM_005247683.1 KIAA1524 PREDICTED: Homo sapiens KIAA1524 (KIAA1524), transcript variant X2, 0.0 3115 85.90 0.4 TCONS_00003314_5 sp|Q8TCG1|CIP2A_HUMAN CIP2A_HUMAN Protein CIP2A; 0.0 1077 90.14 0.998299319727891 0 coding 1 1 1 1 -0.110047963162202 0.534581384587715 0.0276605932482967 0.792851271890437 CGCATGACTAACTTGCCACCGAATCCGAACGGCCATAGGTTTACTCAGAAACCAACATTCCTCAGTAGAAGCGGTGGACAAACAAGCGATTTTAAAAACAGGCCTCTCCCGGGCCGCCTCAAAATCTAGAACCCAAGATTCTCCTCCTCAGAGCTCCTCACCGTGTCTAGACTAGGGGAAAGCGACCATTTCTCAGGAAGAAGATGACGCACAAAGAAACAACTGGCCACCCACGGTGAAGGCCAAGGAAGCAAATGCAAAGAGGGCCCACAGACGAACAGGGACCCCATGCTACCCCACCGCCCCCTACGCCAGTGGAGCCGCAACTGACTTCTCGCGAGATTTCTCAGCTTCACGGGATCTCGAACTAAAACCTCGCGGCTTTTCAGATCGGGGGGTCTGAAAGGACAACTACTAGCCCGCCTTACGGACTCACACTGGGCCTCGACATCCCCCACCTCCACCACTCCATCCCAGCCCTCCCTTTCCTTCGTAGGGTGCCATCCTCAAGTTGCCAAGGGACTTCCGGAGCTCAACCGGAATCGGAAGCTTCTGGGAGCGAGGGGGTGGAGAACAAAAATCAAAAAAAGCGCGGTAAAAGCTGGAGGACGGTGGTGGTACCCGCTCCAAGCGGCCCTGCGGCGGGTCCGGATGGACTCCACTGCCTGCTTGAAGTCTTTGCTTCTGAGCATCAGTCAGTATAAAGCCGTTAAGTCCGAGGCGAACACCGCTCAGCTTTTGCGGCACTTAGAGGTAATTTCTGGACAGAAGCTCACTCGATTATTTACATCAAATCAGATACTACCAAGTGAATGCTTAAGTTGCCTTGTAGAACTACTTGAAGACCCAAACATAAGTGCCACACTGATCTTAAGTATCATCAGTTTGCTATCTCAACTAGTCAGTCTTCTGAAGATGAGTTGACAATGCCTTGTCTAGGATTATTGGCAAATCTTTGCCGGCACAATCTTTCTGTTCAAACGCACATAAAGACTTTGAATAATGTGAAATCTTTTTATCGAACTCTCATAAGCTTCTTGGCCCATAGTAGTTTAACTGTGGTTGTGTTTGCACTTTCAATATTATCCAGTTTGACATTAAACGAAGAGGTTGGGGAAAAGCTGTTCCATGCACGAAATATTCATCAGACATTTCAGCTAATATTTAATATTCTCATAAATGGGGATGGCACACTGACCAGAAAGTATTCAGTTGATCTACTGGTGGATCTTCTTAAGAATCCTAAAATTGCTGATTATCTTACCAGGTATGAGCACTTTTCTTCATGTCTTAATCAAGTATTAGGTCTTCTTAATGGAAAGGATCCTAATTCTTCTTCAAAGTGACTCAGCTGCGCCACGTGCTCACACAGATGATATTTGAGCAAACTCCATCTGGCAGCACCGTTCTGGGAACCCGTTCTAAGTGTTTAGAACCTACTGTAGCTCTACTTCGTTGGTCAAGCCAACCTTTGGATGGATCAGAAAACTGTCCTATTTTAGCGCTGGAGTTGTTCAAGGAAATATTTGAGGATGTCATAGATACTGCTAACTGTTCCTCAGCTGACCGTTTTGTGACTCTTCTGCTGCCTACAATCCTTGATCAGCTTCAGTTCACAGAACAAAATCTAGACGAAGCCTTAATAAGGAAAAAATGTGCAAGAATGGTCAAGGCCATTGAAGTTTTGTTAACTCTGTGTGGAGATGACACTCTAAAAATGCATGTTGCAAAAGTTCTCACTACTATCAAGTGTACCACTCTGATAGAACAACAGTTTACATATGGCAAGATTGATATGGGCTTTGGAACAAAGGTAGCAGATTCTGAATTATGCAAACTTGCTGCTGATGTGATTTTGAAAACTCTTGATTTGATGAACAAACTTAAACAGTTGGTTCCTGGTATGGAAGTAAGCTTCTACAAAATCCTTCAGGATCCTCGCCTGATTACTCCCTTGGCTTTTGCTTTAACATCAGATAATAGAGAACAAGTGCAGTCTGGATTGGGAATATTATTGGAAGCTTCTCCACTCCCAGATTTTCCTGCATTAGTACTTGGAGAAAGTATAGCAGCAAACAATGCCTATAGACAACAGGAAACAGAACATATGCCTAGAAGAGTGCCTTTGCAGTCATTAAATCACAGTTTTCCAACATCAGTAAAATGTTTAACTCCTCCACTTTTGAAAGATAGAGTTCCTGGATTGAACATTGAGGAATTAATAGAGAAACTTCAATCTGGAGTTGTGGTAAAGGATCAGATTAATGATGTGAGACTATCTGACATAATGGATGTGTATGAGATGAAACTATCCACATTAGCTTCCAAAGAAAGCAGGCTACAGGATCTCTTAGAAGCAAAAGCTCTAGCCCTTGCACAGGCTGATAGACTGATTGCTCAGTATCGCTGTCAAAGAACTCAAGCTGAGACTGAGGCTCGGACACTTGCTAATATGTTGAGAGAAGTTGAAAGAAAAAACGAAGAGCTTGCTGTGTTGCTGAAGTCACAGCAGGTTGAATCGGAAAGAGCCCAGAGTGATATTGAGCATCTCTTTCAACATAATAGGAAGTTAGAGTCTGTGGCTGAAGAACATGAAGTTCTGACAAAATCCTACATGGAACTTCTTCAGAGGAATGAAACTGCTGAAAAGAAGAACAAAGATTTACAGGTCACTTGTGATTCTCTAAGTAAACAAATTGAGACTGTGAAAAAGCTGAATGAGTCACTCAAGCAGCAAAATGAAAAAACTATTGCCCAATTGATAGAGAAAGAAGAACAGAGAAAAGAAGTACAGAACCAACTAGTAGACAGAGAATGTAAGCTAGCAAACCTAGAACAAAAAATAAAAGTACAGGAAGAAAAGATTAAAGTCTTACAAAGAGAAAAAGAAGACAAAGAGGAAACCATTGGTGTCCTTAGAAAAGAATTAAATAGAACAGATCAGATAAGAAAAGAATTGAGCATTAAGGCTTCCTCCCTGGAAGTTCAAAAGGCTCAGTTAGAAGGTCGTTTGGAAGAGAAAGAGTCCCTGGTAAAACTTCAGCAAGAGGAGTTAAACAAACATTCTCATATGATAGCAATGATCCACAGTCTAAGTGGTGGGAAAATAAATCCAGAAACTGTGAATCTCAGTATATAGACACTTTGTGTTTATCTACTGGCAGGGTTGGGGAGGAAAGCTAATCTGTGACTCCAAAAGAGCAAATTATTATCTAATTATTAGTAAAGAACCTGATCTGACACATGTTTTTATTTGGTCTTAAATTTTTACTTCCTGTTTCTATATTTTACTGCTTAAAACTTACTTTAGTTCTTCAGAATATTCTTCTTAACCTTCCTTATTTTTTCTAAAGTTTTTTTTTTTTTTTCCCCTTTTCCTTAGTTGCTTTCCACTGTCTTCTGCTTGTTTATTCTCATTTGTGATTAGGTTTTTAAAATCAGGCATCAGTGAACTTTTCTTTCTCCTTTTATTGAAATATAGTTGACATATAGCACTGTATAAATTTAAGATATACAACATAATAATTTGCCTTATGAGCTGATGACCATAATAGGTTTAGTGAACATCCGTTGTCTTACATAAAAACAACATTAAAGAAACAGAAAAGTTGTATTTCCTTGTGAAGATAACTTAGGATTTACTCTCTTAACAACTTTAATATGTAAGTCAAAGAAAGCAGTGTAAATTGTCTTTATCATGCTGTATGTTACATCTTCAGTACTTACTTACCTAAAGCTGGAAATGTGTACCCTTTGATCACCTTCATCTGAGTCTCCCTTCACCCCCATTCAGTGAATTTAAAATAACTTTATTACTGCATTTAAAATGTAGTAAGATACATGGTGTAAGTTCTAAATTTTTTAAAAAATACAGTGAATATTTGTAGAAATAATGTATAAATATTAAAAAATAGCTGTTGTATTAAGTGACTATATTGTCACATAAAAACCTGTAGTAACTTAAAGAATTATTTATGGATACCTTTAGTTTTATTCTTTAAAATGTTACATGTTCACCCACCAGTATCATTTTCAGTCAGTTATGAATTTCTTATTAACATACAGATAACTTGGATTCTACCTTTGCCACATTATTTGTTAATTCTGAAGTAAATTTCATTTAATATATCATCTTTTATTTAAATAGTTTTACATTAGGCCATTTAATTTTAAAGCATAACTTTATCCTCATTCATGTATTTCTTTTATACAAGGGAATTTTTTAGTACTTTATTTTGAATTGAATGTTTTAAGTAGTCTTTAAGAAGAATTTGTATATTTGTATTTTGGTTGATTTTATTGCTATGCTATTACAACCATTGATTTTATTTGGTGTATTCCTCACTATTTGTTATCTCTATTTGACTTAGGTAAACTTAGATTTACTTCTGTTTTTTAACCATTGTATATCTGGATTTATATTTAGAAAATACATTTTTTGTAATTCACTAGTTACACTAAACAATATCAAACTAATAAGTTTCATATATTTGTATGCATTTTGTACAGTTGTGAAAATTTTTCAAAAAGCATCGTGTCATATATTACATTTTAAGTTGCTACGCATTCCTTAAGGGGCATATTCTATTCAAGATACTGAGCCTAGCCCAGTGCTACCCAGTAGAATTTTTGTGATGATGGAAGTGTTCTTTGTCTGCACTATACAGTACTGTGGCCTTGAGCCACGTGTGGTTAATGAGCACTTACAATGTGTCTAGTGCAGTGGAAGAATTGAATTCTTAATTTTATTTAATTTTAATTGATTGTAACTTTAATTTCCATCCAACTGCACAGTTCAGATCTAGTCTATTCTTGCAAGTATGCGTTTATTTAAGCCACTCAATTTGCCTATTCTTAAAAGCCTGTGTAGGCAGAGACTGCATGTATTTTTCAGCCTTTTTTTTTAATACAGTAGTTTTAATCTATTAATCTCTTCTCTCTAAAGAAAAAAACCCATATTTCAGATTTAACGGTGAGTACTAATTGTCATCCATCTTCATTTCTGTTTTTTCCTAGTCTTTCTGTCTCTTATAGCATCTTTCATATTCCTATTGTTTGTCTTAACCTTAGTATATTGGATACTTTTTTTTTTTTTTTTTGCTTTTTGGTTCTGTATACACCTCAATCAAAAACCAAGTGTGTGTGTTTATGTGTGTATATGTTCTTCTTTTGTAAAAATATTAATAATATTTATTTTAAGCAAATTTGAATCTCTAGTCAGAGTTTTACAAATGATTCCTATGTGTTTATGTCCATTTCCTGATGGAGAATACAAGTAAGTAAATAAATATATCATATTGGAGTTGTTCATATTCTTTAAGAATTTTGCTGTGAAGTTTGAATTCAAGTATACATTAACACAATTCCTTGTAACCATTTACATTTGTTACTTGAACAAATAGAGTTTTCTTAAAATTTGGCTGGTTGGAGTTTATAAACTGTCACCCATTTAATTTCAGGGCAAAAAATAAGTCATTAAAACCTAATGCTCTGTTTTACAGAAACTTTGTCAGATTGGTATCCTTTTAGTTTCATTTATTGTATGTTGCAAAAACTAGTTGTCTGTGTTAAAAATATATTGAGGTTCTTTCTTGAGCTAGGACTGTTCATTAAATGAAAATATAACTGAATTTCAACTTCTGCTTGAGGCTTATTCTTATATTTTTGTTACCTCTAATCAAGGTATATTCCCTAAAACACAAACCTTATTTTACTTTGATTTTTTTCTTTTCCTCTTTTCAAATATTATTAGTTACGAATTGTATTTACCACTTTACTTTTGACTTGCCTCCTGTTAGATAAAACACATGTCCTGTTTATGACTTAATTCCTTTGCAGAAATCAGCAAACATTTTCTGTAACAGGGCAGGTAGTGTATTTTAGACTTTGTGAGACATGCAGCCTGGTCTCTTAAAACCACTAAAATCTGCAACTGCAGCATGAAAGCAGCTATCCACAGTATGTAAATAAATGTGTGTGGCTCTGTTCTGATAAAATTTTATTTACAAAAACAGTCAAAACTTTGCTATTGAGTATTTTATCTTCCTGAATAATTTGACCCTTTTAGCATTAAGAAATGTACCACTGTCTTTGGTGATCTCTGTCTTAGTATTAATATAGCCTTTATATATATAAAATGCATGACTTGTAGACAGTATATAGTTGGGTCTTGCTTTTTTTTTTTTTCTACCTGTTTTGACAAATAAGTCCTTAACTCTCAAAGTCCACTTGGAGTTAATATTGTATTACTTAATATAAAATGTAGAAACCTTACAACTGTATGTATTCTTTTATCCTCATTTTAGTTGAC EMBV3_11752 AATGATGTGCGCGGAGAGCAACCGCCGGGACACCTGCAAGGGCCACTTCCCAGTGTCTTG Gene GeneID:100337227|LOC100337227:XM_002689165:195_cdna Constitutive 0 NULL GeneID:100337227 7 GENE LOC100337227 NULL complement factor D-like EMBV3_43063 AAGTCCCAACTCTATCTGTTTGTTAAAAAGAAAAGCAATATAATCCTTACCTAGAGAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38849 CAGGAGCTCAACCATCATCCTCAATCCCATATCAACTTCCTGCCCTCACATCTCCCTCCT Gene GeneID:507426|LOC507426:XR_084032:574_cdna Constitutive 0 NULL GeneID:507426 22 PSEUDO LOC507426 NULL similar to poly (ADP-ribose) polymerase family, member 3 EMBV3_21727 GGCTGAATAGGGAGCTGTCCACTCTGTTTACTTAGTACCAAATTCCGTGAGAGGAGCCAC Gene BVV0102_153412 + 0 NULL GK000028.2:243027-280523 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159877 TCONS_00159876 TCONS_00159875 1 XLOC_097529 Coding TCONS_00159876 XLOC_097529 Coding Coding C28H1orf96 28:276769-297118 j TSS119716 5703 1 TCONS_00159876_2 288 0.156058214974575 4 0.719923333988598 0.0034988045435268 0.00183046794410767 0.00394376157594892 0.00169315906669006 0.00271904910805691 0.00101876560708077 8.8304309262646e-07 0.0022411521976127 6.59575710549191e-07 0.00160932761733155 0.000995131388149553 0.000486312500396991 0.000892754953059254 0.00085939481569171 0.00180209342146686 0.0025664848802954 0.00542314981304688 0.00141617283891747 0.00249622346805252 0.0011176270792358 9.62210142346991e-09 1.41507024299526e-07 0.00278053077356847 0.000482172380371257 0.00377523373780232 0.00288114288441567 0.00237201964107019 0.0016168401515664 0.00108158677609762 6.27880100249337e-08 XM_002698761.3 CCSAP PREDICTED: Bos taurus centriole, cilia and spindle-associated protein (CCSAP), transcript variant X1, mRNA. 0.0 6455 100.00 0.627389093459583 NM_145257.3 CCSAP Homo sapiens centriole, cilia and spindle-associated protein (CCSAP), mRNA. 0.0 1945 73.41 0.567420655795196 TCONS_00159876_2 sp|Q6IQ19|CCSAP_HUMAN CCSAP_HUMAN Centriole, cilia and spindle-associated protein; 2e-116 340 69.34 0.923611111111111 0 coding 1 1 1 1 0.0375383224170834 0.736168549623221 -0.0432184046322208 0.58907339169349 CGTGTCATGGGTCCTGTAGGCGACCGCGCGGCGCGGAAAGGCGGGCATTCGGGGCCGACGTGCGGCACCATGTCCCCGGGGAGCGGCGTGAAGAGCGAGTACATGAAGCGCTACCAGGAGCCGCGCTGGGACGAGTACGGGCCGTGCTACCGTGCGCTGCGCCACTACCGTCTGGGTCGCCGGCTGCTGGAGCAGGCGCACGCGCCTTGGCTCTGGGACGACTGGGGCCAGGCCGGCGCCTCGGACGACTCGGCGTCTTCGGCGTCGTCGGGCACCGGGGCCCCCGCGCCCCAGTGCGCCCCGGCCTCGCCGCCGCCGCCGCCGCCCGCGGAGCCTGAGGGGCGCGTAGGGCCGGAGGAGCGGGAGGTGGAGGCCGCGGGGGACGCGGAGACCAGGGACGCGGTGGACGCAGAGGACGCGGCGCTGCCAGCACTGCCAGTGAAAGATGTAAAAGAGAAACCTGAACGACAGATCAGGATGAGAGACCCTGAAAAATCAGCCAGCAGTACTGACCCTCAGCAACCACCAAGTGCCTTAGCTGCCCGAGGAAGCAGGAAAACCAAGAGTCCTCAGAGGTCATCCACTAGAATAAAAGAACACAGGCACCCGTTTGCCCTCTATGGGTGGGGAGAGAAACAGACGGATACAGGAAGCCAGAAAACTCACAACGTCTGTGCTTCTGCACCCATGCATGAGATCCATGAATCAGCATTGCGAGCCAAGAGCAGAAGGCAGGTGGAGAAGAGGAGGCTGGCGGCTCAGAGGCAGCGGGCTCACTCTGCTGATGTGGAGAAAAATAGGCGGGTCAAGCCTGCCTCCTCAGAGAACCCATGGATGACAGAGTATATGAGATGCTACTCTGCCAGAGCTTGAGGGAAGGAACAGTTGCTTGGACAACCTCTTTTTAAAAGTGTAAATGAAAGAAAAGAACAAGACAAAAACTATCAAAAGCAATTGGACACAGGTTTAAGAAACCAACTGATTATGCAAGATTTTTCTTGGGGAATTTCCAAAAGATTGTCTCTTTTGATGAATCCTGGTCACCTACCTCAGCAGTAGGGTGACAACTGAAGCCATAGAAATTTGGTTATTTATGAGGAGAATTCCCTAAATCTTTGATATTCTTATAAGGGTTTTGTTTTAAAGCATCTTAATCTTTTAAGATACTGACACCAAATGCCTTTAAATGGCTGACAGATGCTTAACTTCAGTATCTATGCTCAGTTTAGGTGAAGCCTGTTTTCCTCCTGTTCTGAACAGCTTCTCAGATCCCATAGCTGGTAAGGTCACGCCAGCTTGCCACAGAAGATTCCCTTTCCTTATGTGTAGTTTGCTTTGAACATCAAGTTAAAAGTGAGTTTCAACACTACTTTTGATTCCATGTATAGTGAAAGTATTGTAGAACATTGGTAGTTCCTAAACAATTAAATGTTTTTTGCGTTTCAGTTCAAGTACCACTTCATGTGGACTGTGATATTTAAGAACTATCCGGGCTGGGTGAGGGTCATCTTTTCTCTTTAAATTGTCATCTAGGCACTTATATTAATAGTTTAGTTCAAGTGCATTCCAGTAAATGAAGTGTTTAGAAGTAGTACTGAAGTTTCTTTTGAGTCAAAGAGTCACTTTTTAATTGAGATTTTTTAAGGACACTTAATGGGGTACCAGTCACTTGCTGCAGTCTCGCCTTTTGGCAGTCACCCACTGTGGACTTCTGCCTCTTCTAGAAGAGTTTAGCAATGATACTTACAATTTAAAATCTGAACTTTTACTTAGTAAATTGAGATTGTCTTGCTTACCGGGGGTGGGGGACAGATGTTAAGCTACCTATGAGAGATGTGGGTCACCCCTACTTTCCTCCTCCATGGAATTACCAATAACAAAGCCTTGATGATGCACATTGTTCAGACTTTTGGTTGAAATACATGCCTCACAGGTTCCTAGCTGGTAGGTTTTGTGTAGAAGCTAATGTGAGGGGATGCCGCTGTGTGTATGGGCATAGATGTGAGCATTTCAATGAAGTGTTTCCTTCTCTCCAGTACATTTGCTTTTGGGGTAGAAAGTGGTTTTGAGAAACATTTTTTCCATTCAGCAGAGATAGGAATCTACAGTAAGGATGAATGCTAAATTCCTGATAAGAGAGAAAAAAGTTCTTTGCCCACTTACCATGTAGAGATGTGTGAATGAAAATTTGGTGTTTGATGTGCATTTGAGCATTTCCTTGATATTTTTACTCTGGGTCTTTAAAGTATTGTGGTTGATTTCTACAAAAATGTTTCATTCCATGTAAAATCTTCACACAGTATCATCTTACACAATCATATTAAGCTTTGCAAATTTGTATTGAAGAATCATGAGCCTTTAGAAACAACTTAAAATATTTGCGTTATTTTGAGGTGAATATATAGAGAGCTCTCCTAGTCACTATGATGTATGTTTAGTAAGAGAAAGGTCTATGTGTTGTCCAAAATGTCCTTGCTAGGGATTCTGGTGAATCTTGCTGTTATTATAATCCTTAAACACTCCAGGTACCTAAAGATGAAATTTCTGTGGTAATGTGGTGGGAACTGTCTTTAAGACCACTTCCGGCATGTATAGTTTCAACTACCAGCTCCAGTGTTCTGTTCCCCTGACAGTCTAAGGAAGCTGACAGTCTTAGGAAGAGGCTGTGGGGAGTAGCTCAGGTCTACACTGATGGACTGCCTTAGAAACCCGACCCCTCAAGACCCTGAGCAAGCCAGACTCTCTCCTTTAAAACACAGACTTGCATTTAATATGGTTAATTACTACTGCAAACTCCACATGCAGATCTGGAAGAACCTAGAGGGTGATATTGGCCAGTATTTCCCCCCCTTTTAAGTAGAGGACCAATGAACAAGATTTTTTAAAGTGTTTTTAATGTGCATGAACAATGAATGAGTCAATATGAAGTAACTGGGAGTCCCCTTCCTGTGTCCAAGCCATTGGTTGGTTAGGGTTTCATTTTGTTCTTTCTCTTTAGGGGTAAAGATGATCTTTTGAACCTACAAAAATTTTTAAGTTGTAACAACTTGATGTCCTACTTTTTCCTTCTCACTAATGTCATTGTGATCATGTTCTTATTCCTTAAGACAGCTTATGAAACAGCGAGGTAATTTAAAATTGCCTTTCATGTTGAAAAATTTGAAACTGAGAATCCAGTGATATTTAAAATATAGATTGAAATAACTGCTGCATAAGAGTCTCCTTTTAAAATTTTAGTTTTTAAGTTCTTAATTAAAACAACTTGTAACATGTTTTCTGTGTTTACTAAAAGCAATAATAAAATATTAGGTAACACCTGAATACTTCTGCTGGACTGAGGTGAATGAGAATAGGAATCTGTCCTTTTTCTTGCTTTTAAAACCTAGAAGACTGCTCTATTTATGAGGTGTCAAATGCTTGTACTCCCCCATGGCCAGAAAATTCCCAAGTACCTATATACATTTCTTTTAAAGTCTACTAAAAGTAAAATAGGGTGTAGTTTATCTGAATTGCTCGTAATGTAGTAAGCACACATTTGTGTGCTTCTTATGAAATAGCTTTGTCATTGGTTCATCAGATTGTTCAAATGTATTGCTGGCAAAGAGGAAGAGGGGCCAAGCATATGTTAAAAGTGAAAACAACTGTCTTGTTGACTACTTCAGTGGAAAATAGCTCAGTGGGCACTCTTACGTTTCACTGGACTAGACAAAAAATGGTGCTAATATTTATACAGTCTGATTTTGTAGTTGGTTTGGGATCAAATTGCCAATGCCCGACTCATGGGTCCTTACCATAGTCTTATGATCAGTTAAGTAGTATTTAAAAAGTGGTCCTAAACGTGTAACCATGTATAAAATTTGAAATGGATTTTGTACAATAGGCTGAATAGGGAGCTGTCCACTCTGTTTACTTAGTACCAAATTCCGTGAGAGGAGCCACGTCCAGGGTTGAGGCCCAGGTTTCCTCCCAGCCTGCTGGTGTGAGAGGAGAAAGCTGCTCCTTTATCATTTATTTCCATTTTGAAAGTCAGGACACCTGAGTGAAGACACTAGAGGCCTCTTTTTGGATTTCTTTATAATTAGCAGAACTTTTTCAGAGCTGTCTGCCTGTGTTGTTGTTGTATGTGTATTTTGAGCACTGCACTCACTTTAACATTCTGAAGGCACTAAGGCCGGGCACCTACAGTCACAGAGCTCAGGCGGTGGGCATTTGGGGCTGTGTTTTCTAAAAACTGTGTGTTGCTTTTAGCTTGTATTTAATATTGTAGTTACTTGGAAAAATGTGAATAAAGTTCATTAATACTACAGGCTAAGCTTCTGTTTTGTGGGCAGTAATTCTGACTAGTACATTAATGGTTGAAGAGAATTCGATGATTATATGGACTCCTAAATGTATTTTTCATTAGATAAATATTTAGTAAGGTATATTACATCCAGGAAGAGATACTTTCTGTGTATACACTTTGAATTAAACTCCACATTTTCCCAGTCTTTCCCTCATACCTTATTGCTTTGAAAATTACCAAAGGGATAGGGCATGGGCAAAAGAAGCTTAAAGAGATTTGTTGTTCAGTTGCATTCAGCTCGTTGTGAACCCATGCACTGTAGCCCACCAGGTTCCTCTGTCCATATGATTTCCCAAGCAAGAATACTGGAGTGGGTTTCCATTTCCTTCTCTAGGGACCTTCCTGACCCAGGGATCAAACCCAAGTCTCCTACACTGGCAGGCAGATTCTTTACCACTGAGCCACCAGAGAAGCCCTAACTCAAAGAGAAGTGTAGAGTAAAAAGTCAAAGTTCCTTTCAATACCACCCCCTCACCAATATTCCACATCCCTTCTTAGAGGAAACCAGACCTTTTTTCCCAGGCACTTGGAGGTACATATACACTGTTGTTGTTGTTTTTTTGCACAAATATGGAATAATGCTATGCATATTCTGTAACTCCCCAGCTTTCCCTCACCTGCTTTCCTTGTTTATACTGTCCCCCTGATCCTAATTAGCCAGCCAAGCACCTTTGAGAGTGGGCTGCCTGGCAGACCCCTCCTCAGGTCTCAGACTGACCACAAAATTCTGTACATGTGAGGCAGGTCCAAAGAGCACTGCAAAAGCTTTGAAGGCTGAACTGGCATTGGAACCAGCATGCCAGGACTTGGGGCCTGAGCCTAAACAGATTGATTACTTGATAAAACAAAAATGCCAGCATTCTCCATAGGACTTGGTTGTATTTCATCATGTAATATTCAAAATACCTATGAGGCACTCCAAATTACTCAGTATATGAAACCATGAAAATGGCTATCATGGAAAAAGGCAATCAGTAGCTGCCATCACAGCCTTGAAGGAAGCTGTTATTGAAAAGTTCAAATGAATGATCACACTCTTGAAATAAGTATTAAACTAGAAATTTTCAGTAGAGAAATAGATGATAGGAAAATCAAGTGACAATATTAGAACTGAAAAATACTCCAACTGAAATTAAAAAAACCTTGCTAGATAGACAGAATAGCAGGTTGAAGATGACAAAATAAAGATAATAGATCAATACAAATCATCCAATCTGAAGAACAGAAAAGGGCTGGAGAAAAGTTTCCAGGTTGTGTTATAGGAATCATAGAAAGAGAAGAGGAAAAGTGTAGTGCTTTAAAATCATCTGCAGAAATGATGGCTAAAATCCTTCCAGGTGAGCTGAGTGAAGCTGAAA EMBV3_30819 GACTTGGTAGTACTTGTTTCACGAAGAAGGCCGCTCGAAGATGGTCACACTTACGTGGTG Gene GeneID:525155|ACOT12:XM_002689371:17_cdna Constitutive 0 NULL GeneID:525155 7 GENE ACOT12 NULL acyl-CoA thioesterase 12 EMBV3_29638 GGTTGCCCCAAAAGGCTCAGAAGCGACCTGAACCAAACAGTAAGTTTTCCTCCTACCTTG Gene BVV0101_042736 - 0 NULL GK000028.2:30009662-30053805 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177299 1 XLOC_107073 NonCoding TCONS_00177299 XLOC_107073 NonCoding NonCoding - 3:47218939-47219100 - TSS132058 161 1 TCONS_00177299_1 48 1 0 0.00048412206918104 2.35060372283053e-05 6.15125944221712e-05 2.17558337508834e-05 3.18543338807159e-05 2.66257025230555e-05 1.44613183839298e-05 9.65469372066069e-05 2.28103302693077e-05 1.27778990506871e-05 0 1.23384445711907e-06 3.14655857655273e-05 2.9217363860973e-06 1.8396826611582e-05 0.000510538171708817 0.000135189666729376 0.000606150866417618 2.10239185053094e-05 8.12279341903458e-05 3.06094737773927e-06 4.68178659048635e-05 5.63258910449609e-05 8.44091819393766e-05 0 0.000169133228139048 4.56962359981819e-05 1.09375986539718e-05 2.21441530155181e-05 0.000559455794543745 XR_233643.1 LOC101906753 PREDICTED: Bos taurus uncharacterized LOC101906753 (LOC101906753), 6e-76 286 99.38 0.993788819875776 0 noncoding 0 0 0 0 -2.0448662141511 0.0063196790153044 -0.154695617100503 0.0363343375272233 GAACACATGACTGAGGCTAGGGGTGAGGCAGTACATGTATGTGCCAGGATACTCCTAAAGTATACTCTTAACGTAGATGAGGAGAACAAGGTAGGAGGAAAACTTACTGTTTGGTTCAGGTCGCTTCGGAGCCTTTTGGGGGAACCGACCTGAAGCCAGAG TCONS_00173199 . 5' 306617 TCONS_00173199 . 5' 306617 EMBV3_08103 CATTAGCATCTGGCTCTCCTGCTACTCCAGGTATTCCTGCTCCCCTGGGAGAGCGCGGAG Variant GeneID:527461|PAQR5:XM_002690486:426_cdna 535^631 1 EMBV3_28896 GeneID:527461 10 GENE PAQR5 NULL progestin and adipoQ receptor family member V EMBV3_13166 GACGCAGGCCATTGTGACTGGCATCCTTGTTGTCATCATCGGAATATCCCTGGGCATGAA Gene GeneID:615498|AQP7:NM_001076378:64_cdna Constitutive 1 NULL GeneID:615498 8 GENE AQP7 MGC133718 aquaporin 7 EMBV3_14481 TTTTAGTAACTCCAATGAAAGAGACTTGTTTCCCCAGTCAACTCCCGGGGCTGCGAAGGG Gene GeneID:535137|EPHB2:XM_002685781:616_cdna Constitutive 0 NULL GeneID:535137 2 GENE EPHB2 NULL EPH receptor B2 EMBV3_24902 ATGTGTGTGATATGACCTCCCGAAAGTAAATTAATTCATCTTTATGAAGTTTTAGAATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34141 ATGGGCGGCGGAAAATTGCCTTTGCCATCACTGCAATTAACGGTGTGGGCCGAAGATATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01726 GAGAAGTCACCACAATAGAAGCCTGCACACTGCAACGAGAGAGTAGCCCCATTTGCTGCA Gene BVV0101_055057 - 1 EMBV3_02562 GK000019.2:36542421-36610212 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11241 TGGCCGGGAACTTCGCCTTCTACCACACCAAGGCCAAGAGGTGGATGGCCCTCCCAGACT Gene GeneID:100337336|LOC100337336:XM_002686582:46_cdna Constitutive 0 NULL GeneID:100337336 3 GENE LOC100337336 NULL Kelch-like protein 30-like EMBV3_08902 TGCCAGGACTCCACAGATACAGAGAGCAACCACGAAGATCGAGTTGGCGGGGTGGTGTCA Gene GeneID:540671|IKZF4:XM_002687582:648_cdna Constitutive 0 NULL GeneID:540671 5 GENE IKZF4 NULL IKAROS family zinc finger 4 (Eos) EMBV3_20807 CCCCAGGAACAGTTCATTTCTCAGGATCCTCTCAGCTGGGAACGAGCCAGGCAGCAGAGT Gene GeneID:100336437|LOC100336437:XM_002696791:512_cdna Constitutive 0 NULL GeneID:100336437 21 GENE LOC100336437 NULL Smad nuclear interacting protein-like EMBV3_39856 ATGCTGCTTCCGTAAAGGATGGCTCCCAGTATTTTGTGCTCCTAATTGTGACAGATGGTG Gene GeneID:535744|CPNE8:NM_001098085:10_cdna UTR3_Alt 2 NULL GeneID:535744 5 GENE CPNE8 NULL copine VIII EMBV3_01152 GAGGATGGCCACATCATCTACCTCTCTCTTCCCTAGTTGCTGTGCTATTGTACGGGTAAC Gene BVT0102_060573 + 0 NULL GK000003.2:53811925-53852736 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173453 TCONS_00173445 TCONS_00173454 TCONS_00173441 TCONS_00173439 TCONS_00173443 TCONS_00173444 TCONS_00173447 TCONS_00173449 TCONS_00173448 TCONS_00173451 TCONS_00173450 TCONS_00173452 TCONS_00173446 TCONS_00173442 1 XLOC_104358 Coding TCONS_00173443 XLOC_104358 Coding Coding LRRC8B 3:53848548-53926231 j TSS128923 6991 1 TCONS_00173443_5 804 0.0861107137748534 5 0.910069256713267 0.000993580248439371 0.00223448766724779 0.00107525612358978 7.38289269396733e-08 0.000165210860651492 0.00070534174740823 0.00118361175965484 0.00107922176459979 0.00180608371615973 2.29271353149126e-05 7.9216277160387e-11 2.78927064047943e-08 0.000390601810353152 0.000330098807966243 1.11061921474372e-06 0.000272878815737652 5.52623445297259e-11 1.7323319176645e-11 3.49237664837296e-08 1.22467271884964e-36 5.78329736633388e-12 2.83802688184473e-11 3.61699979486241e-11 5.11193768326904e-05 0.000115384615946362 4.09816019062693e-07 2.62138804319103e-07 1.64379856125069e-10 5.53378512798628e-05 1.27828707822638e-05 XM_005197834.1 LRRC8B PREDICTED: Bos taurus leucine rich repeat containing 8 family, member B (LRRC8B), transcript variant X1, mRNA. 0.0 1.154e+04 100.00 0.915176655700186 NM_001134476.1 LRRC8B Homo sapiens leucine rich repeat containing 8 family, member B (LRRC8B), transcript variant 2, mRNA. 0.0 3546 90.15 0.373194106708625 TCONS_00173443_5 sp|Q6P9F7|LRC8B_HUMAN LRC8B_HUMAN Leucine-rich repeat-containing protein 8B; 0.0 1565 97.14 0.998756218905473 6 coding 1 1 1 0 -0.351881333343805 0.0573976579708926 0.0194857364885908 0.804320466437972 CTGGGGCTGGAGTCTCGCCCTCCCTAGTAGGAATTTTTCAAATAGAAACTAATTGCAGCATTTCCAGTTGACCAGCATTCATAGGAATGAAGACAATCACAGAGATGGTGTATCTAAGAAATTTCAAAAGGTGTAGGCCTCCTGATTGAAGTACAGTCAACTTACTGGATTCCTTTTTTTTCATTATATTTCTGTCCTCCTACAAGGGAAAGCCATGATTACACTAACAGAGCTAAAATGTCTAGCAGACGCCCAGTCATGTTATCACATCCTGAAGCCGTGGTGGGACGTCTTTTGGTATTACATCACCCTGATCATGCTGCTGGTGGCCGTGCTGGCTGGAGCCCTCCAGCTGACACAGAGCAGGGTTCTGTGCTGTCTTCCCTGTAAGGTGGAATTTGACAATCACTGCGCCGTGCCTTGGGACATCCTGAAAGCCAGCGTGAACGCATCCTCCGATGCCGGGATGCCACTTCCGCTGCCCCTCAGAATCCAGAACGACCTCCACCGACAGCAGTACTCCTACATTGACGCCGTCTGTTACGAGAAGCAGCTCCACTGGTTTGCCAAGTTCTTCCCCTACTTGGTGCTCTTGCATACACTCATCTTTGCAGCCTGCAGCAACTTCTGGCTTCACTACCCCAGCACCAGTTCCAGGCTCGAGCATTTTGTGGCCATCCTGCACAAGTGCTTCGATTCTCCGTGGACCACCCGCGCCCTGTCAGAGACGGTGGCTGAGCAGTCAGTGAGGCCCCTGACCCTCTCCAAATCCAAGGTTCTGCTCTCATCCTCAGGGTGCTCAGCCGGCGACGTGGATTCCAACAAGCAGTCATTGCCCTACCCACAGCCTGGCTTAGAGTCAGCTGGCATAGAAAGCCCGACCTCTAGTGTCCTGGACAAAAAGGAGGGCGAACAGGCCAAAGCCATCTTTGAAAAAGTGAAAAGGTTCCGCCTGCACGTGGAGCAGAAGGACATCATCTACAGAGTGTACCTGAAACAGATCATAGTCAAAGTCATTTTGTTTGTCCTCATCATAACTTATGTTCCGTATTTTTTAACCTACATCACTCTGGAAATTGACTGTTCAGTGGATGTGCAGGCTTTTACTGGATACAAGCGCTACCAGTGTGTGTACTCCTTGGCAGAAATATTCAAGGTCCTGGCTTCGTTTTACGTCATCTTGGTTATACTTTATGGTCTCACCTCGTCTTACAGCTTGTGGTGGATGCTGCGGAGCTCTCTGAAGCAATATTCCTTTGAGGCACTGAGAGAAAAAAGCAACTATAGCGACATTCCAGATGTCAAGAACGACTTCGCCTTTATCCTCCATCTGGCTGATCAATATGACCCGCTTTACTCCAAACGCTTCTCCATATTCCTGTCAGAGGTCAGTGAGAACAAACTGAAACAGATCAACCTCAACAATGAATGGACGGTCGAGAAACTAAAAAGCAAGCTTGTGAAAAATGCCCAGGACAAGGTAGAACTGCACCTTTTCATGCTAAATGGTCTTCCTGACAATGTCTTCGAGCTGACGGAAATCGAAGTGCTAAGCCTGGAGCTGATCCCTGAGGTCAAGCTCCCCTCTGCGATCTCACAGCTGGTCAGCCTTAAGGAGCTCCATGTGTACCACTCATCCCTGGTGGTCGACCACCCTGCCCTGGCCTTTCTAGAGGAGAATTTAAAAATCCTCCGCCTGAAATTTACTGAAATGGGGAAAATCCCACGCTGGGTGTTTCACCTGAAGAATCTCAAGGAGCTTTACCTGTCAGGCTGTGTGCTGCCTGAACAGGTAAGCACCATGCAGCTGGAGGGCTTTCAGGACCTGAAAAACCTGAGGACCCTCTACTTGAAGAGCAGCCTCTCCCGGATCCCACAAGTTATCACGGATCTCCTGCCTTCACTGCAGAAGTTGTCCCTCGATAACGAGGGGAGCAAGCTGGTTGTATTGAACAACCTGAAAAAGATGGTCAATCTGAAAAGCCTGGAGCTGATCAGCTGCGACCTGGAACGTATTCCACACTCCATTTTCAGTCTGAACAATTTGCATGAGTTAGACCTCAGAGAAAATAACCTTAAAACTGTGGAAGAGATCATTAGCTTTCAGCACCTCCAGAATCTTTCCTGCTTAAAGTTGTGGCACAATAACATTGCTTATATTCCAGCCCAGATCGGGGCATTGTCTAATCTAGAGCAGCTCTCTTTGGACCATAATAACATTGAGAACCTGCCCCTGCAGCTTTTCCTATGCACCAAACTACATTATTTGGATCTAAGCTATAACCACCTGACCTTCATTCCAGAAGAAATCCAGTATCTGAGTAATTTGCAGTACTTTGCTGTGACCAATAACAACATTGAGATGCTTCCAGATGGGCTGTTTCAGTGCAAAAAGCTGCAGTGTTTACTCTTGGGGAAAAATAGCCTGATGAGCTTGTCGCCTCACGTGGGTGAGCTGTCGAACCTTACTCATCTGGAGCTCATCGGTAATTACCTGGAAACACTTCCTCCTGAACTGGAAGGGTGTCAGTCCCTAAAACGGAGCTGTCTGATTGTCGAGGAGAATTTGCTCAATACTCTTCCTCCCCCTGTAACAGAACGTTTGCAGACATGCCTGGATAAATGTTGACCTAAAGAGAGAATAATTTTTAAAAGTACATTCCAGGGCTTTAAATGAGAACTAAAATTCCCTAGGTTATAAAGATGAACAATGGATAATTATCACTAACTATAACCAAATGTCTTATTATAATAAGGCAACTCAGTGTCTAAATTAAACAGGTAAAAAGTATTAACACTGAAACAAAGTTTTGTGAATAATTGATCTTTAACTTATGGAGATATAAGAAGTGTACACTTGGAGGGTAGAATAGGGCCATGAAGTTATTGAATCTCTACACTGCAGTTTTTATCTTTTGAAGATGAGATATAACTTACTTGCATACTTGTTTTAACTGACTTCCTGTTTTGATATTTATCACCTAGGGCATAAACTCATCAACATAAATTCCCTTGAGGTACACTCAGCACTGTCTTTGATTTATGTTCTTAAATACTTTTAGGCAGGATGCATTGCGCTTGGCAGAGTTCCTCCTTGGCTTAATTTTTACTTCCTGCCCCAGCTTGTTTGCGTCTTCCTTCATCTGATTTTCTCTTAGCAACAGTGATGAACCCTGAGAAAGTGCCTGCCTGTGGCCTTTGCACAGAACAGGAGCAGGGTATTTAGGATAAGTCATCCTTGGGCCATCCTGAAATTTTAATGTATCCTCTGCAATTTCTTCTTGTATATCATCAGAGCCTTTTTTATTTGCTACTAATTTTTATATCAAATGTAAAACATATAAATGTTTTCTATTGTATAATCTTGGATTCAAAATCTGTGAGAATAGTTTTTGTAAGGTACAGAGGACACATCCTTTTCTTTAAGAACTTACTATTAATGTACTTGGTTTCGGCTGCTTACGAGTCTCACTTTTGTGTGCACTTGGCTCCAAAATGTTTTTGTAGTCTGCAGCTAATTATTTCTGGATAACAAAAGCCTTGTGTTTTCATGCCCTAAAATATTTGGGGGTTTCCTTCCAAGAGGATGGCCACATCATCTACCTCTCTCTTCCCTAGTTGCTGTGCTATTGTACGGGTAACCATTCTTAATTACTTCAAAAACTGTGATGGAGGGGAGAGGTACAGATTTGGATCTATAAAACTGATTTTTAAACACTCTGTAGAAATTAAGTAAAAGTTAAACAAAATACTTTCTTCTCCATCTGCATGATCTCTAGATAGGATTATAATGTGAAACACTCTGCCTCTATTCATTGCTTAATATGGGTTCTCAAAGCTCACAAAGAAATAGATCTAATTAACTGAAATTCATCTCATGTCTTTGTCTAACTTCTCTGGAATACATTTTGCTCTTTTTTTTCAATAAAGAGTTTTGTGTTTGGCTTTTTATTATCATGCATATTGTAAAATGAATAAAGCTGACTGACTCATTTTGGGGAAATATACATTTTTGATGTGTTTTTCTCTGTGTCTAGGCATTGTGATGCCATTTCAAACTATGAAATAATCTATTAACTGCACCTCGACAAAACTGGAAAACACTATGGGTAAAGAGTACTGTAAACATGGAATTGTGATGTATGGTATGTTTTTCCCCTTGCTTTGTCCCTTCCAGAAGGATGAAAATGAGTTTTTAAATTATGGCCAAATGTAGCTTCCCTCACCTGCCACACACCTTTGATCTTACATTCAGAGAAAACAACTGTTCACATCAAATAAAATTTGAGTAATAGCTATGAAAAACATAAAACACCAAAAGCTGCCTAAAACACTGCTGTTTATTCTAAATGAGGAAGAACAATGTAAAAATGCAATTTTTACCAAAACTTGCCTTTAGTCAGAACATTCAAGCTCTCAGGGACCCAAGCATAACTGATGAAACTTTCTTCTAGACTTCAGAAAACAGATTCTGACTCTATCTAGGTTTTTTGTTATTTTCAATCTTTTTAATGTGAGATCATTGTCATTTTAATGTTTCCCATCTGTGTTGCACAGTAGAATTGTCATGTGTACCAATTCCAGTGTTTGGAACATGAATATGATACATGGAAATATGTTCGTTTTGGGTCATATAATTACTCATAATGTGCATGAAAAATCCTATCCCTTTTGATAAGGAAAAGTTTTCAAAACAAATTTCAGATTTACTACCATTTCCCTGGGGTTTCCCAGGTGGCACAGTGGTAAAGAATCGCCTGTCAATGCAGGAGCCGTGGGTTCGATCCCTGGGTTGGGAAGATGCCCTAGAGGAGATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTAGCAGGCTACAGTCCATAGGGTCGCAAAAAGTCGGACATGACTGAGCGGCTGAGCACGTACACACCATTCCCCTGACAGTCTACAGCCCCTCCTGGCTAGTCACCAGGTTCTGTTCACCTGCAAAAGGCACTAACTAAATCTTCCTTATCACCTGTCTACATTTCTGGAAGCAAGTTACTATCATAATGAGTTTTGTAAGCTGCTTTCCAAACACAAGAATTTGGTTACTAGTGCAAACTCCTTTCAAGTTAACATTTTTTTTTTAACTTTATTGTATTGGTTTTGCCATATATCAACCTGAATCCACCACAGGTATACACGTGTTCCCCATCCTGAACCCTCCTCCCTCCTCCCTCCCCGTACCATCCCTGTGGGTCATCCCAGTGCACCAGCCCCAAACATCCAGTATCATGCATCGAACCTGGACTGGCGACTCGTTTCATATATAATATTATACATTTTTATTTCAGTCCTACACACCAGTGTTTAGGTAGCTTTGGGAATGATGTAACACAGATGCCATGAACTCTGAGACCACCACTTAACATGTAAAACTGTGGTATTTGCCAACTTTAATGCAATATTGGAGCAGAATTTCATTTTGAAAGAGAGTTTTCAAAGAAGCAAATGAAGTTTATTCAATTATAATTTTGAGACCAGTTGACACTTGCTTTCCAAGAATGTGTACTGAACTTTCCAAAAAATAAATATGGATGTTATTCAGAACAAAGTTGACGGCTTATGCTAGACTAGATGCATTTATTTACATAGACACACACAGATACACAATGATGAGCCTGCATGCACATCCCTATGTGTACAAAATTTATTCGTTTTGAATATATGTAATATTTTTCCAAAGTTGCAAGTGGTTGTAGGTTAATGCTAAAATATTAATTCTTTTTTATTCCTTACTTGTAATCATGGAGTGCTCTATTCTCTTAGCTATAATATTAAAGTAAAAAGAAATGAAAATGAAAGTCACTCAGTCGTATCTGACTCTTTGCAACCCCATGGACTATACAGTCATGGAATTCTCCAGGCCAGAAAACTGAAGCAGGTAGCCATTCCCTTCTCTAAGGGATCTTCCCAACCCAGGGATCAAACCCAGATCTCCCAATTGCAGGCAGATTCTTTACCAGCAGAGTCGCCAGGGAAGCCCAAGAATACTTTAAAAGAAAACCAAATGCTCAGACTTGGTCAGCAACCTAAGTGGTTTTGACCCTAATGTACATTAAGGTCCATCTCTGTGGCACACAGATGAGGTGTTTTCATTCTTCATCCTTCGTCTTCATTTTCTCCTGATACCACCATGTTTCACTGTCACTTAGCAAATGTTTGTGTTAAACAGGGTAAATAGAGATGCCAAGATCTCATCGTTGTGGCATAGCGCCAGTGTATGTGCTGTGGGGAGCTGTTATCTGTATAAAATTATTGTTTAATAGTGGAAATATTTGTTTCTGTTCTTCAGGTGTCTCATGATTTAAATTTTGTATGTTGAATTAAAATATTGCATAATATTGATGGGTTCAAAACCATTAAAATAATCAAACAATTATTCTGTGGGTTTAGTTTTATTTCCTTGTATTTTCAATCAAATACTCTTTCCATCTTCACTTTCTTATAACGTCCCATCCACATAAGCTATTTTGTTTTCCCTCTCTGCTCACCCACCTCCTTAAATTGATATAGTAACAGAATATATTTGTGCTAGAGAACTTGAAATACTACTGGAGCATGTATTTATTTGGGGGGAAGCCAAAGCCTATAATTACGCCTAATTGAATTGTTCTACTCAACCCATCCTTGCAGTGTTCAGAGCTGATCCAGTGATTCTTCATCCATACCAATATAACAGAGAGAATGAGAATATAACTGTAAATCCACTTTGTTTTCAGGAACTGTATATTGCATCAGAATCTGTGTTTATTTCTTTGTAGAAACGAGGAAGTCTGGTCTGGGGAGGAGTTATTTTGTACCCTGGTTTGAATTATGAAGACATTATATACATGAAATGGCCTAAACTAATAACTGTTGCAAAATGCCCTGGATATGATAATTTCTTCAGCTGTAACTGAAAGCTGAAGCAGTGAAAAGAAACCAGTTTAACTGGTTTCTTCCT EMBV3_07683 TTGGAAACAGATATCAACGTTTACAGTTGGGTGAACAAGTTTTGTCCTACAGATGTCCAA Gene GeneID:539529|UBQLN2:XM_002700163:78_cdna Constitutive 1 NULL GeneID:539529 X GENE UBQLN2 NULL ubiquilin 2 EMBV3_12291 GTATGGCGCTGCAGGGACCGGCTCCGGGGTCCGAACTGACCGGGAGACCAAAGTGACCCT Variant GeneID:510618|CDK4:NM_001037594:986_cdna 80^382 1 EMBV3_36076 GeneID:510618 5 GENE CDK4 MGC133903 cyclin-dependent kinase 4 EMBV3_29090 TGCTTTCTGCCCCCTGGTACCTGAACCATATAACTTATGGCCCTGACTGGAAGGAGATCT Gene GeneID:504468|HEXA:NM_001075164:68_cdna Constitutive 0 NULL GeneID:504468 10 GENE HEXA NULL hexosaminidase A (alpha polypeptide) EMBV3_30374 CACTTCCATTGTCAAGGTTTAGCGGCCCCACCAGAAACAACAAGAGGAAAACTTCTCTCC Gene GeneID:615986|CCL25:NM_001046569:99_cdna Constitutive 2 NULL GeneID:615986 7 GENE CCL25 MGC140392 chemokine (C-C motif) ligand 25 EMBV3_05550 CCCAACTTCTGATTAACTGGGGCATTCTAATTCACCCTCCACACATCCCTATGGCTCTGG Gene BVT0102_129453 - 1 EMBV3_33934 GK000015.2:53404314-53492849 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065045 1 XLOC_039769 NonCoding TCONS_00065045 XLOC_039769 NonCoding NonCoding - 15:53405257-53406506 - TSS48788 1249 1 TCONS_00065045_1 60 0.11609287429944 1 0 0 0 0.00116323209725193 0 0 2.8639372393665e-06 9.33820613746732e-06 0.000430936014928932 1.26343314537517e-05 0 1.83281351642518e-06 0 2.29726503250794e-06 0 0.000769910050057416 0.00031719285568541 0 0 0.000287067739605778 0 6.56242209969796e-05 0 0 0 0.000604646852412137 5.64088014947694e-06 0 1.53805624156782e-05 0 0 XM_005216213.1 LOC101905537 PREDICTED: Bos taurus RNA exonuclease 1 homolog (LOC101905537), 0.0 2069 99.65 0.925540432345877 0 noncoding 0 0 0 0 -0.076058790147492 0.519759412488524 -0.010966078998147 0.902962341900547 CAGTGTGGCGGGAGGGGGGTCAGGCAGTACGCCTAGTTGTTTGAGGGAGTAGCAGAGTGCCTTTTTTGCTTCATGGTCCTCCAACACCCCTACCCTCTCGTGCAGATGAGCCTGGCGGTCCAAGGCACCTAGGAGCGAGCGCGGAGAAATCCTTTCGCAGCGGCGCTGAATGCCTGGCTTGGGTGAGGGCGAGGGCGACTAGTTGCCCTGCAAAGGAAAAATCGGTCGTCTGCTACAGGGCGTCCAAGTCAAAGAGCATGAGGTCGTTAAGGCCAGGACCCACCCCATCCCGCATTTCACAGATGGAAGGCCAGAGGAGTGGAGACTTCATGAAGGTTACACAGCAGTGCTAGAATCTCTGGGTAACGGAGTGTTCTTGAGGGTACAGAGAAACAGGTGCAGATGATAATCAAGAGGAAAAGTAAAGGAGGCTCCAGGGGCAGTGGAGGAAGCTCTTGAATGAGAGTCAGGACCTCTAGGTGCCATCCCACTCTGGGTGCCAGTCCACTCTGCCTGCGCCTAGCTATTTGGGTGAGCTCAAGCTTCCTCATCTCCCAACGAGGATGCTCTGGTCTGCTTCCCGGACTCCGTCTTCCTCCTCTATCCAGACCATCTGGGTGTAGGGATATCAGCCTCCCTTGAAGTCCTTAGAAAAATGAAAAACACCTCTTCCAGAGCCATAGGGATGTGTGGAGGGTGAATTAGAATGCCCCAGTTAATCAGAAGTTGGGGTCTCAAACACCTGTTCTCAGAAGCGGGGTCAGGCAAAAGAGGAAAGTGAGTGAAGCCTGGAGAGACCCAAGTAACTTGACCAAATCCTCTTGGCCAGCTATTAGGACGATGGAACAACCTAGATTGTTTACATTGTTAGCCTAGATTCTTGAATAGGAAGTTGATAGAATCAGAGCTATGCTTGAGGCAGATTAACCTGTATAGGAATTGGAAGACTAGGCTTGCTATTTCTGGTTTCCTTGAGGCCACTCAAAGTGAACCCTTTATCAGAGTCCTCAATTAGTATCTGGGAAAGCCTGGGGCAAGGGAACAAGTGGGTGGAGGCCCAGCTCCCTGACCTCTGTGGGGCTGGCAGCTAGTGCCTAGGGTGGAGGTAGCCAGGCTGGGCTCAGTTCTACCAGCAGTTCATTGTGAGGCCTTGACCTAATCAGTTCATCTCTTTCAACCTATATTTCCTCACCTGTAAAATGGGCATCTAAAACCAGCCTCACAGGCTCGTTATATTAAATAAAATTTC TCONS_00061754 TCONS_00061758 TCONS_00061759 TCONS_00061761 TCONS_00061763 TCONS_00061764 . 5' 186 TCONS_00061754 TCONS_00061758 TCONS_00061759 TCONS_00061761 TCONS_00061763 TCONS_00061764 . 5' 186 EMBV3_23593 TAGGGGATATGCTCTTGTCGGGGTAATGGGCTGACTTCCTGATGGAGGCAAACCTGAGAT Gene GeneID:504514|ELF4:XM_002699519:40_cdna Constitutive 0 NULL GeneID:504514 X GENE ELF4 NULL E74-like factor 4 (ets domain transcription factor) EMBV3_42942 AGTATCTGAAGAAGGAGGTGCAGTGCCTCCGAGATGAGCTCCAGATGATGCAGAAGGACA Gene GeneID:511680|TRIOBP:NM_001046096:52_cdna Constitutive 1 NULL GeneID:511680 5 GENE TRIOBP MGC137642 TRIO and F-actin binding protein EMBV3_37338 CTACAGCACCACAGTTATTTCGGTACACCTTTCATAAGCAGAGTGTGTTGTGGGAAATGC Gene GeneID:281613|AK3L1:NM_174237:41_cdna UTR3_Alt 2 NULL GeneID:281613 8 GENE AK3L1 AK3 MGC137322 adenylate kinase 3-like 1 EMBV3_35327 GTCCCGAGTCACTGTTTGGAGTTCTTTTTTGGGCTGTATGTTCTTAGCACGGGGACTTCC Gene GeneID:616809|GOLGA7:NM_001035484:109_cdna UTR3_Alt 1 NULL GeneID:616809 27 GENE GOLGA7 NULL golgi autoantigen, golgin subfamily a, 7 EMBV3_25378 AGGCTCCTGTGAATGAGGAAACAGAGCTGGACCCCATCTTAGGCCTGTTCATGCTGATCA Gene BVV0101_010364 + 1 EMBV3_01803 GK000003.2:26222382-26244066 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176308 1 XLOC_106086 NonCoding TCONS_00176308 XLOC_106086 NonCoding NonCoding - 3:26240704-26241689 - TSS131067 985 2 TCONS_00176308_2 84 0.170558375634518 1 0 0.000124316081699134 0 2.81848656416055e-05 0 0 2.54206830731853e-05 8.45788646549976e-07 0 0 0.000397989934341835 2.78885360632102e-06 0.000108904061237995 0 6.82232608678575e-07 0 0.000144198819604029 2.40787387127823e-06 0 1.21335628328096e-06 2.92037220191591e-05 4.40280028729349e-07 0 0 0 0 1.02182273326582e-06 0 9.75145041243634e-06 0 0 XM_003587167.2 LOC100847983 PREDICTED: Bos taurus uncharacterized LOC100847983 (LOC100847983), 2e-93 347 80.98 0.352284263959391 0 noncoding 0 0 0 0 0.0377144455935331 0.805810928224858 0.0176082664623843 0.729531870580303 AATGCAGGAGATGTGTGAGTTTTATCCCTGGATTGAGAAGATCCCCTGGAGGAGGAAATGGCAACCGACTCCAGCATTCCTGCCTGGAGAATTCCATGGACACAGGTGTTAAAGCCACGCGTTCTGGGAAACAAACTCACTCCGAAGGACAATGCAGATAGTGGAGTGCAGTTTATTACACTGGCGGGCCCAAGGCAGAGTCTCCTCTTAGCCAAGGACCCTGATCAGCCCACCACCCCAATTTCCTTGAGACGTACACAAAACAGAGGAAGGGTAAATACAATCACAATAACCCCATCATTCATGCGTTAGGTGTTCAAACAGTTAATAATCAATAAGCCTGCGGTTACATCCCAATAGATACAGAAAGGGTTTATGACCTGTCCGGAGGCAGGCGTGATTAGAGTATGTTTTCTCTTAGGCAATGAGTAACCTGGATGTGATCTTCAAGATTCCCCTGTCCAGAGGGGGTCTTATCCTTCTATTGTAGTTTCCATAGGCACTAACCACAGAGTTCAGAGTCCATTGGAGAGGTGCCCGAGCATGATCAGCATGAACAGGCCTAAGATGGGGTCCAGCTCTGTTTCCTCATTCACAGGAGCCTGGTGGGTTACTGTCCAGAGTCGGACATGACTCTGTGGGGTTACTCGGTGGGTTACTCTGTGGGGTCACAGAGTCGGACATGACTGAGCACACACACACACTCTCCTAAACAGTGCCCGGAAAGGACACTGATAGTGTTGATTTAATGTGCCTTCAACTGACATGACCCACCTGTCGTGTCAAATGGGTATAGTGTGTGTATGTATGTTGTTAAAATCCCTGTGGAGCAGTGAGTGTATGCCAATCCTCACACCTCACAGACGGAAAGAACTGAGGTGCCTGGGGAATCTGCAACTAGCTAAACACCAGACAGTCAGCAAATGTTCCTACCAGCCTGGGAGCCAGGGCTTCTCAGGTGACATTCCCTTTAACCTGGTGTGTG TCONS_00172647 TCONS_00172648 TCONS_00172649 TCONS_00172650 . 3' 2241 TCONS_00172647 TCONS_00172648 TCONS_00172649 TCONS_00172650 . 3' 3225 EMBV3_21177 GCAGCTGCTGCCCCTGGACACCTACGTGCAGAGCCTGCTGAGGCCACCAGCAGACACGTC Variant GeneID:613571|MGC152007:NM_001076278:219_cdna 233^521 2 EMBV3_31882 GeneID:613571 26 GENE MGC152007 NULL protein fucU homolog EMBV3_41303 GTAATAGCCCGTTACCTTTGACTATTCAGCAGAGGTGTAAGCGTGAAGACAATCTCAGTG Gene GeneID:514520|DOPEY2:XM_002685151:119_cdna Constitutive 0 NULL GeneID:514520 1 GENE DOPEY2 NULL dopey family member 2 EMBV3_40630 GGAGGCGGCGGCTGCAGTGGGTGGCGCGCAAGAATAATAAGGCTGTCTGCAAAGATTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31363 GGCAAATGCCCGAGAGCCTCCCAGAGTACCCAGATTATGATTCAGTGATGGCTTTGTACA Gene GeneID:526488|MGC137130:NM_001075885:21_cdna Constitutive 0 NULL GeneID:526488 X GENE MGC137130 NULL similar to melanoma antigen family A, 10 EMBV3_22770 TGGGGAGAGAGCTTTTCTAGGTTGAAGAAGAGGTCTATATGCAGAAACAACACAGTCAGC Gene BVV0102_395958 + 1 EMBV3_25690 GK000008.2:103943471-103981751 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35238 ACTACAGTGTCTGAGAGCCCCTTCCAGTGTGATCCTGATGCTGCCAAAGCCATTGTGGAT Gene GeneID:280701|PPA1:NM_001075118:197_cdna Constitutive 0 NULL GeneID:280701 28 GENE PPA1 MGC139082 PP pyrophosphatase (inorganic) 1 EMBV3_29038 TGAGTCGTGCTGGCTCGGTCGGGGCAAATGCAGGAAAATATGCACTGAGGATGAGAAGAT Gene GeneID:100296624|LOC100296624:XM_002698622:20_cdna Constitutive 0 NULL GeneID:100296624 27 GENE LOC100296624 NULL similar to beta-defensin 35 EMBV3_18088 ATCCACTTTCCTACGCTGCTGATGCGATTCCATCCCCGGTTGGGAACTAAGATCCTTCAT Gene BVV0102_265767 - 1 EMBV3_40625 GK000015.2:79167405-79174521 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23120 CTGGGGATTACTATGTTACAGTTGTGGAAGATGTGACTTTAGGCCAGATAGTTGCTACAG Gene GeneID:512299|GNPNAT1:NM_001075559:140_cdna Constitutive 0 NULL GeneID:512299 10 GENE GNPNAT1 MGC142368 glucosamine-phosphate N-acetyltransferase 1 EMBV3_16875 GGTAGAGGAGAAGCCCGCATCCACTAACATTCAGAAAGGCAGGAAGCTACTTAGTGATCG Gene BVT0101_002693 + 0 NULL GK000026.2:35092986-35197850 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152243 TCONS_00152249 TCONS_00152233 TCONS_00152235 TCONS_00152238 TCONS_00152244 TCONS_00152250 TCONS_00152234 TCONS_00152248 TCONS_00152245 TCONS_00152242 TCONS_00152240 TCONS_00152253 TCONS_00152241 TCONS_00152246 TCONS_00152252 TCONS_00152239 TCONS_00152236 TCONS_00152251 TCONS_00152237 TCONS_00152247 1 XLOC_092285 Coding TCONS_00152239 XLOC_092285 Coding Coding ABLIM1 26:35193551-35282840 j TSS113583 6853 1 TCONS_00152239_4 406 0.0493214650518021 15 0.92341636054117 0.00366072307733091 0.00243476567277689 0.00215694707496492 0.00250105633707567 0.00177796474766735 0.00128903816378355 0.00121337226743739 0.00260830052341012 0.00317640993702755 0.00142680201430276 0.000487707938216931 4.95105546879166e-05 0.00122347251935709 0.00270074686350826 0.00189191770013187 0.00125615633966992 7.47517450282271e-44 1.14987234887417e-13 0.00193480301841124 0.00486126930720854 0.000598338009445314 1.81281830645102e-16 0.000459747820999039 0.000215038201582379 0.00456779873374287 8.30937566288681e-07 0.00283383053378317 0.000345114480791943 5.87966019025724e-08 0.000702496422507129 XM_866358.6 ABLIM1 PREDICTED: Bos taurus actin binding LIM protein 1 (ABLIM1), 0.0 9560 99.98 0.773821683934043 XM_005269828.1 ABLIM1 PREDICTED: Homo sapiens actin binding LIM protein 1 (ABLIM1), 0.0 1537 90.01 0.166058660440683 TCONS_00152239_4 sp|O14639|ABLM1_HUMAN ABLM1_HUMAN Actin-binding LIM protein 1; 0.0 771 83.62 0.997536945812808 1 coding 1 0 1 1 -0.0124721925157652 0.910269579293792 -0.0155634123928932 0.814421904409179 GAGGGTGGGAACTGCCTGGCCTAGTCTGTTCTTTTTTACGGTGTGTGTCTCCGGAGACGCACAGGTTTCGTGTCTCGCTTTAGAGGGGAGCTCGCTCCTGTCCCCGAGGCGGGCAGGGAGCCCCGGTCTCGCGGGCCGAGGTCTGGCGTTTACAAGCCTCTTGGCAGTGTTGTGGGTTTGAAGCCCAGAGGAATTCCCTGCTCAGAACAACCAGGAACCGAAGTAGAAGAAAAGGAGCCCGGGCTTAAGGCGGGTGACAAACATTACCACCCGAGTTGTGCACGATGCAGCAGATGCAACCAGATGTTCACAGAAGGAGAGGAAATGTATCTGCAAGGTTCTACCGTTTGGCATCCCGACTGTAAGCAATCAACCAAGACTGAGGAAAAGCTGCGGCCTACCAGGACTTCCTCTGAAAGCATTTACTCGCGACCAGGCTCCAGCATCCCTGGCTCCCCGGGTCATACTATCTATGCAAAAGTGGATAATGAAATCCTGGATTACAAGGATTTAGCAGCCATTCCCAAGGTCAAGGCGATTTACGACATTGAACGTCCAGATCTTATTACCTATGAGCCTTTCTACTCTTCGGGCTATGATGACAAGCAGGAGAGGCAGAGCCTGGGAGAGTCTCCAAGGACTCTGTCTCCTACTCCATCAGCGGAAGGGTACCAGGATGGGCGGGACCGGATGATCCACCGGTCCACAAGCCAGGGCTCCATCAACTCCCCAGTGTACAGCCGCCACAGCTACACTCCAACCACATCCCGCTCTCCTCAGCATTTTCACAGACCTGATCAAGGGATCAACATTTACCGAAAACCACCCATCTACAAACAGCATGCTGCCTTGGCAGCCCAGAGCAAATCTTCGGAAGACATCATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCTCCAGACCCCAGCGAGATTCCAAAGATTGAGACGGACCACTGGCCTGGTCCCCCCTCACTTGCCGCCGTAGGAGCTGACACGAGACGCAGATCTAGTGGCCGAGAGGAAGAGGATGAAGAGCTTCTGAGACGCCGGCAGCTTCAAGAGGAGCAATTAATGAAGCTCAACTCGGGCCTTGGCCAGTTGATCCTGAAAGAAGAGATGGAGAAGGAGAGGGAGAGCCGGGAGAGGGCCTCCCTGGCCGCCAGTCGCTATGATTCCCCCATCAACTCAGCTTCACATGTTCTATCATCCAAAACCGCATCTCTCCCTGGCTATGGAAGAAATGGGCTTCACCGGACCCTCCCAGATGGCCACATGCCTGGAATGAGGATGGACCGGGGCGTCTCCATGCCCAACATGTTGGAACCAAAGATATTTCCGTATGAAATGCTGATGGTGACCAACAGGGGGCGCAACAAAATCCTAAGAGATGTGGACAGAACCAGGCTGGAGCGCCACTTAGCCCCAGAAGTGTTTCGGGAAATCTTTGGAATGTCCATCCAGGAGTTTGACAAGTTACCTCTTTGGAGACGCAACGACATGAAGAAAAAAGCAAAACTCTTCTGAGTCCCACACGTAGACAGCCATTAGGAGAAGGACTGACCACGGCGGGGACACATAGGATGTTGAATTAAGGCCCAAACTTGATTGGAGCATTTGCAAACTATAGTCCCTCAGCAACAGCCAAAAGGGAAAAATCTGATTAAAACACCCATGAGCCAAATATGGGGCCAGCCCACGGCCACACTCGCCCAGAAGCAGTGGGGTAGAAATGTCTGTGTTTCCACACTCGACATTAGCGTTCACCTGTGACCTTTTTCCATCACCTTGTGTCCACAACAGGAGCTACTTCTTTCATTTCCTTTCAACTGTTATCCAACAGTAGTGCGTCTGTATGAATAAGAGCCAGCAAGTGCCCTTAAGATGCCGCATGGGCAAGCAGTTGTAATAATTCCAAAGTATGAATATATTTATCTTGTAGCGCCTTGGCTGAGAAGCAAGAGCCCGGGGACAGTCCACGTGGCAGCAGCCTTTGCCTCTTTCCTCACTGGCCTCCTGCAGTGCTGCTCGGGCCTCAGTGGGATGGACAGCAGGGTCGGGCTCCCCAGGAGCTCTGTTTCAGTAGCCACCAAAGGCATTTTTAAAAAGCTCCTCGTTCCCTACTGTTTGCTAGGACCCAACTTGGCAAGTTACTTAGCTGTTGCTAAAAAAAAAAAAAAAAAATTAAGAGGAAAAAGGAATGGATGAAAATTCTCCTTTAACCCTTTTCTACTTCAGGAAATATGTTCCTCCCCACCAAGGACAAGAGCTGTCTCAGCCCCCAGCCCTCTACTCTCACAAAGGAAAGAAAGGGAAAGATTGTCTCCTGATTGGCCCAGTTGGATACTGTTAGATGAGTTTGGTCCAAAGGCCATAGCCCTCTTGACCAAAAAAAAAAAATTCTGTGTCTTCCCAATGCAAGTTTCCCAGCCCAGCTTCCTCTTCTTTCTATCCAGCATCCTATATATCACACGAAGCCCTCGATGATTTTGAGTTCTTTAAGGTCTTTTCAGTAGTAGGCTAAGGAAAGGCATGTTTTTCTCTTTGAAAGCTCTGAAACTCAAGGGCGATGGCCCCCAACTGATTTAATTTGGTCTTTTCAGCTTTCTTGCCTAGCTCTGTTGACTTCCTGATACGTGTGTGTGTGTGTATGTGTGTGTTCGTGTTTTCACTCACCCATGACAGTTTGGGGAGTCTGCATGTGCTTTTAAATTTCACTCCTGCTTGAAGGTTTGTCCTACTCAGCTGCAGTTTCTGGGGACATTTGCACAGGTGCATGTGACTCAAAGGTCAAGAGTGAGGCTAACTGCATCCTGGTCATCAGGTCCCTCATGGAAAGATGCTGGTGGTTAGAAGCCAACATATTCCATGACAGATGTAGCTCAAGTCAGCATCAGACTGAAGACCGAGGCTTTGGATCAGGCTGGGAGGAGACAACAGCAGAACATCCCACGAGAGTCCTCAAACTCAGCAACACAAGATTCACATTGGAGCCAAGGATTACACCCAAACTTGCATGTAAGACGCCACCATGGTTCCTGAAAGCCTCTGGCTGAGACTTGAAGGTGATGTCAGATACACGTAGGAGGTTGTCACATTTATTTGCGTGCTTTGGAGAGCTGCTTAAGAATTTAAACTCTTATTTAAAGCCAAAGGAGAAAGCATAGGAGGGTGTCACATAAATTCTCATGCTTTGGGGGCTCTGTTTCAGAATTTGTAAACTCTATTTTAAAGCCAAAGGAGAGAACCTGTATATGCCACTAATTATAAAAGCTCAGAAGTTCTTCCTGCTGGCGCCAAATATTAGAATGAGTTAGTAGCTGATACCAGTGGCAAAAAGCAAGAATATTCTTTCTGACCTTGTGCTGAAGACCTAACTTGTGACACACTCTAGAGACTGGGTGTCTTAATGAACATGACAGTTGCTTAATTATTGCATTCTGTGCTCTTCCTGACCTTTGCTAGACACTGAATGTTTAAGGACTGTGTGTGTGTGTGTGTGAATGTGTGCTGGACCTACTAATGTATTTAGCAAATGGTTCTGATGAGGTTGATGTGAGGAAACCAGCTCCTCCTTGGACTGAAGGCAGACCACGGCTCCTTCAGTTCTGTTCCTTCATCTGTTTGGTTTGTTGCCTTTTGCTTCATTCAGTACATCCACTGGCCTGTCTTCTATCTAACCTCTCCTGCATGGGCAGCCCTCAGCACCTGTGTGTCCTGATCCTCGCTTCACTTTGGCAAAGTGTGAGGGGGGAGACCACAGTGTAGGCCCAGTGTTTCCCTGCCTTGACCAAAGACACAGATGGCCGAATGGATCCCAGGGCTCAGCTGGAGGAGAGAGATTTTCATGGTGGAGATAAGAAGGGCCCTCAGTGTTTTTCACTGGCGAATGAGTTAAAACCCACATACTTGCAGATCAAATGTCAGTGGAAGAAAAACCCCAATGATAGTTAAAGAACTGAGCCCTAAATTTGCCCCCACTAATGAAACTTTACTTTTCTTCTTACTTTTGAATTCAGTTCAGCATCCTCCTTGGGTAAGGGGAACGCTTCTTTCCATATCAAATGTATTAGCTAATTTAAACTATACCATGCAAAAAACTGCCTTGCCAGAAATGCCAATGGCTTCCTGTCTGTAAGCAGAGAAATGCTGCTCTCTGAAGTGGGGGCTCCCAGCCCCGCTCCCCAGCAGAAAGCTCCAGGCAGAGTGATGGGTCACGGCACAACCGGGTTCTCCCAACTGCCGAATCAAATCAAATCAGTGGGCTACAACACCCTATCTGTTTCGTTGAACTGAGCTCAGCATGCTTGTCCTCAGAACGTCCAGGTCACTGCACAGGAAATCAGTGTTCTCTGCCTGAATCCCGCCCTGCATAAAAAATTCCAGTTCTTAACACTGTCAAATTAATAAGAATTGTTTACTCTAGGAAAAGGAAGTATATGCATGGCAAGCTTCCCTAGTACGTACAGAAAGGGCTACATTTTTGAGCATTGGACTGACTAGTGATTCTTGAAGCATAGGCTGATTGCATGAAGAGGCCTCTATAGTTACATGAAAGTCAGCGCTTCCTTTAGAGTTTCTTCCAGAAAAGCCAGGATACCATTTAGTCTTTGGGTGTGATTTATGTCGAGACACAAAGAGCATTTGGAAACTTGTTCATCTTGCTGGGTGTCTATCTCTTGGTTTGGGTTCGTTCCTAAATGTTCTTAATGTGACTTCTTTAATCACGAAAGAGAAACTGCCTGTTCTCAGAAACCTTGAACAGAAAAGCTAGCGTCAGTGGGTAATAAGGTGCAAAGAAAAAAAATAGCTTCTCCCTGTCGAGTCCTCAGTCTCCCCTCTTCTTCCAGTTCTGTTGTGTCCAAGCTGAGTTTCCTCTTCCAGGGTGAGGCTAGAACTATGCCTTTTTCAACTTCCATCCCCTCCATCTGTGATGTCAATCAGCTCCACTAGGAAAAGTCTCGCTGGAAATGTTTCTTAAACTTTCACCTAATTTCTTTACACTTTAAAGCAAACACCTTTTTCTAAAGAACTGCTTCTCAGATGATTATATAAAATATATATGCTTTTGCAAGTTTAAAAATTCAAATTCACTTTTGACTAGATAGGTCTTTCTAAAAACTCTTTAAGGCAAACTTGGTGTTAGCGTTCTCCTGCATGTTGAGGGGCAGGGGACCCTCCTGTCTGTAGGCTCCCAGAGCCTTCTCTCTGACCGCCGGGAAAGACAGTGGAAGGAAGATGAACTTTGTGCCATCAACCCTTCTGTGTCCTCTGCAGGAAGCTCAGTTTTTACAAATCATCTTGTCTGTATTTCCAGTCACTGTTTAATCTGTACTTCCTAGGCCAGACTTGATTTTATCTGACTTACTAAGATTATTTCCCTTTGATAAAACAAGTGTTTGTCAGGATGCCCTAAAACTCACTCATTAGTACTCCCTTTTGAAGTACGTTCTATAAAAAAAAACCAAAAACAGATTATTTCAGGCTTGAGATTTGTAATGACACCTTATAGTGCTGACGTGCATTAAGGGCACTACCCAATTATGCTTTTTTTTTTTTTAAAGGATAATTGCTTTTCAGAATTTTGTGGTTTTCTGTCATACATCAACAAGAACTAGCCATAGGTACAACCATGTCTCCTCCCTCCCGGATACCCCTCCCAATTATGTTTTAATGAAAGAAAGAGAAACTTTGGTATTAAAAAAAAAAAATCACTTTCTGTTTGCTGCCAAGAAGCAGTGGGGAGATGGTGACTGACACACTTTGCATGTGAATCTTTGTGTTTTTCATTTGGGACAAGTTTCATTTACGACAGACTCAAAAGGGGGAAGTGGTCGGTTTAAGCTGGAAAGCTCTCTAAACAATCTGCTTGTACACGGCAAAATTAAAGCCAGTCTTTTCTGATGCTTAGTGTAATGGAGTGGCAATTGCTCTCATTAAATAAAATTCTTCCCCAAAGAGTCTCTCCCAAGCCCTGAGTCGCTTTCCGAGCCCGTTTGGGAAAGGTAGAGGAGAAGCCCGCATCCACTAACATTCAGAAAGGCAGGAAGCTACTTAGTGATCGTATTCGTGTATGTTTCTTTATTCTTACGGAAGAGGAGTGTCCAAGGGGTTGGTGTTCGTTTGGGATGTTCTGTACAGACCTGTCCAGTAATAAACGTGTGGTTTCTGTGAGTTGCCGACAATCCTGCATTGAAGCTTTTGCAGTTCTTTCATTTTGAAGTTGGGTTTAATGGAGTTTTTTTTCAAGTGTTGGAAGGCATACTGTTCTTCTTGCCTCCCCTCCCCTTCCAGAAATATGAAAGCAAATATTTGGAAGAACTGCTGTTTAAAAGATGTATCGTGTCCCCCGTGAAAGTGTGTGGGTGTCTGTCGGTGTCCTGAGTGCCGCGCACCAGTGCGCAGAGGCGGGGGTGGCCCTGGGCCCGAGCTGCTATGCTTGTGATGCTGACCTGCTCCGCGCTCCTGTTGAAATCAGCACCTGCCTCCCCCGCCGCTGTCTGGCCTCACTGTTATCCTCAAAACTCAGTGAATAAAGTGTGTGCTTTATTCGTAACTGCCTCCACGCCGTGTTTCCTTTCTGGTTCCCTTGCTCCCTTTAAAAGTCTGTCCCATTTGAGAAAGTGCCAGAGGACTTCCCTGGTGACCCAGTGGTTAGGAATCCATGTGCCAGTGCAGGGGACATGGGTTCAGTCCCTGGTCTGGGAAGATCTGACACGCCAAGACAACTAAGCCCATGCTCTGCAACAAGAGAAGCCACCGCAGTGGGAATCCCTCACACCACAGCTGGAAAGCAGCCCCTGCTTGCTGCAACTAGAGAAAGCTAGTGCAGCGACAAAGTTGTGCAGCCATAAAT EMBV3_21816 TTTAGTCCCCTCCATCACCAACAAGCGGATAGTGGGCTGCATCTGTGAAGAAGACAACAG Gene GeneID:287012|COX5B:NM_001034046:20_cdna Constitutive 0 NULL GeneID:287012 11 GENE COX5B MGC127763 cytochrome c oxidase subunit Vb EMBV3_31191 CGTAGCCCTGTGCCATCGGTTCAAGGAGACAACTCTTGGTGAAATTTGTCAGTTTTGAGG Gene BVT0101_062129 + 0 NULL GK000020.2:58664250-58714124 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115187 TCONS_00115189 TCONS_00115185 TCONS_00115188 TCONS_00115184 TCONS_00115186 TCONS_00115190 TCONS_00115191 1 XLOC_069467 Coding TCONS_00115186 XLOC_069467 Coding Coding TRIO 20:58712574-58880503 j TSS85735 8481 1 TCONS_00115186_5 1598 46 0.949770139583631 0.0012020154373536 4.74219907612391e-22 0.0008677339273297 0.00029196506103756 0.00093428561071189 0.000237355566866675 0.000209011206865532 9.82359887106285e-05 0.000312003268387593 7.19302829071119e-10 3.54447110993534e-06 1.54853786208056e-12 4.88488487042016e-10 0.000448038268436299 0.000206590288604607 0.000921887382279544 0.000225605631311723 0.00045468447178251 0.000705283759601938 0.00180445423782221 0.00031989494212034 1.82259048007187e-09 6.62853117893186e-05 0.000539968600769458 0.000627779143135882 0.00143371547934576 0.00125373790546944 2.52389532993389e-09 3.46643013922716e-15 2.00571114894934e-09 NM_001102212.1 TRIO Bos taurus triple functional domain (PTPRF interacting) (TRIO), 0.0 3582 100.00 0.234052588138191 NM_007118.2 TRIO Homo sapiens trio Rho guanine nucleotide exchange factor (TRIO), 0.0 6673 89.66 0.582714302558661 TCONS_00115186_5 sp|O75962|TRIO_HUMAN TRIO_HUMAN Triple functional domain protein; 0.0 3162 98.26 0.99874843554443 5 coding 1 1 1 1 -0.105156231704243 0.5090428709318 -0.0674235810204996 0.352865182324245 GTACACCAATGCAGATAAGTTACTTGAGGCAGCCGAGCAGCTGGCCCAGACGGGAGAATGTGACCCGGAAGAGATCTATCAGGCTGCCCATCAGCTCGAGGACCGGATACAGGATTTTGTGCGGCGCGTGGAGCAGCGGAAGATCCTCCTGGACATGTCGGTGTCTTTTCACACGCATGTGAAAGAGGAGCTGCTGGACGACGTGTACGCCGAGTCCGTGGAGGCCGTGCAGGACCTCAGCAAGCGCTTCGGCCAGCAGCAGCAGACCACCCTGCAGGTGACTGTGAACGTCATCAAGGAAGGCGAGGACCTGATCCAGCAGCTGAGGGACTCAGCCATCTCCAGCAACAAGACGCCGCACAACAGCTCCATCAGCCACATCGAAACGGTGCTGCAGCAGCTGGACGAGGCCCAGGCGCAGATGGAGGAGCTCTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCCTGCAGCTGCGCATCTTCGAGCGGGACGCCATCGATATCATCTCAGACCTGGAGTCTTGGAACGATGAGCTTTCTCAGCAGATGAACGACTTCGACACGGAGGACCTCACGATCGCGGAGCAGCGCCTGCAGCACCACGCGGACAAGGCCCTGACCATGAACAACCTGACCTTCGACGTCATCCACCAGGGGCAGGACCTGCTGCAGTACGTCAACGAGGTGCAGGCCTCCGGTGTGGAGCTGCTTTGCGACAGAGATGTGGACATGGCCACGCGGGTCCAGGACCTCCTGGAGTTTCTGCACGAGAAGCAGCAGGAACTGGACCTCGCAGCTGAGCAGCACCGGAAGCACCTGGAGCAGTGCGTGCAGCTGCGCCACCTGCAGGCCGAGGTCAAGCAGGTGCTGGGCTGGATCCGCAATGGAGAGTCCATGCTGAACGCCGGGCTCATCGCGGCCAGCTCGCTGCAGGAGGCAGAGCAGCTGCAGAGGGAGCACGAGCAGTTCCAGCACGCCATCGAGAAGACACACCAGAGCGCCCTGCAGGTCCAGCAGAAGGCCGAGGCCATGCTGCAGGCCAATCACTACGACATGGACATGATCCGGGACTGTGCCGAGAAGGTCGCCTCACACTGGCAGCAGCTCATGCTCAAGATGGAAGACCGGCTGAAGCTGGTGAACGCGTCCGTGGCCTTCTACAAGACCTCAGAGCAGGTCTGCAGCGTCCTGGAGAGCCTGGAGCAGGAGTACAAGAGGGAAGAGGACTGGTGCGGAGGGGCCGACAAGCTGGGCCCCAACTCCGAGACGGACCACGTCACCCCCATGATCAGCAAGCACCTCGAACAGAAGGAAGCATTCCTGAAGGCTTGCACGCTTGCCAGGAGGAACGCGGACGTCTTCCTGAAGTACCTGCACAGGAACAGCGTGAACATGCCAGGCATGGTGACGCACATCAAGGCCCCCGAGCAGCAAGTGAAAAATATCTTGAACGAGCTCTTCCAGCGGGAGAACAGGGTGCTGCACTACTGGACCATGAGGAAGCGGCGGCTGGACCAGTGCCAGCAGTTCGTGGTCTTCGAGCGAAGCGCCAAGCAGGCTCTGGAGTGGATCCACGACAGCGGGGAGTTCTACCTCTCCACCCACACGTCCACGGGCTCAAGCATCCAGCACACCCAGGAGCTGCTGAAGGAGCATGAGGACTTCCAGATCACCGCCAAGCAAACCAAAGAGAGAGTGAAGCTATTGATACAGCTGGCCGACGGCTTTTGTGAAAAGGGGCATGCCCATGCGGCAGAAATAAAAAAATGTGTCACTGCCGTGGATAAGAGGTACAGAGACTTCTCTCTGCGGATGGAGAAATACAGGACCTCTTTGGAGAAAGCCCTAGGGATTTCTTCAGATTCCAACAAATCGAGCAAAAGTCTTCAGCTGGATATTGTTCCGGCCAGTATCCCCGGCTCAGAGGTGAAACTCCGAGACGCCGCCCATGAACTTAATGAGGAAAAGCGGAAATCTGCCCGCAGGAAAGAGTTCATAATGGCTGAGCTAATTCAAACTGAAAAGGCTTACGTAAGAGACCTCCGGGAGTGTATGGATACCTACCTGTGGGAAATGACCAGCGGCGTGGAGGAGATCCCCCCGGGCATTGTAAACAAAGAGCTCATCATCTTCGGGAACATGCAGGAAATCTACGAGTTTCACAATAACATATTCCTAAAAGAGCTGGAAAAATATGAGCAGTTGCCGGAGGACGTGGGACATTGCTTTGTAACCTGGGCAGACAAGTTTCAGATGTATGTCACATATTGCAAAAATAAGCCTGATTCTACTCAGCTGATATTAGAGCATGCAGGATCCTACTTTGATGAAATACAGCAGCGGCACGGATTAGCCAATTCCATCTCCTCCTACCTTATTAAACCAGTTCAGCGAATAACGAAATATCAGCTCCTTTTAAAAGAGCTGCTCACGTGCTGCGAGGAGGGGAAGGGGGAGATCAAGGATGGGCTGGAGGTGATGCTCAGCGTGCCTAAGCGGGCCAACGATGCCATGCACCTCAGCATGCTGGAAGGGTTCGATGAGAACATTGAGTCTCAGGGAGAGCTGATCCTGCAGGAATCCTTCCAAGTGTGGGACCCCAAAACCTTAATCCGAAAGGGCCGTGAGCGGCACCTTTTCCTGTTTGAGATGTCCTTGGTGTTTAGTAAAGAAGTAAAAGATTCCAGTGGCAGAAGCAAGTACCTTTATAAAAGCAAATTGTTTACCTCAGAGCTGGGTGTCACAGAGCACGTTGAAGGAGACCCTTGCAAATTCGCACTGTGGGTGGGGAGGACACCAACTTCAGATAATAAGATTGTCCTTAAGGCCTCCAGTATTGAGAACAAGCAGGACTGGATCAAGCATATCCGGGAGGTGATCCAGGAAAGGACCATCCACCTGAAAGGCGCCCTGAAGGAGCCCATCCACATCCCCAAAACAGCTCCAGCCACGAGACAGAAGGGAAGGAGGGATGGAGAGGATTTGGACAGCCAAGGAGATGGCAGCAGCCAGCCCGATACGATTTCCATTGCCTCCCGGACGTCTCAGAACACGCTGGACAGTGACAAGCTGTCCGGCGGCTGCGAGCTGACCGTGGTGATCCACGACTTCACGGCCTGCAACAGCACCGAGCTCACCATCCGCCGCGGCCAGACCGTGGAAGTCTTGGAGCGGCCCCATGACAAACCCGACTGGTGCCTGGTGCGGACCACTGACCGGTCGCCTGCGGCCGAGGGCCTGGTCCCCTGTGGCTCCCTGTGCATCGCCCACTCCAGGAGCAGCATGGAGATGGAGGGCATCTTCAACCACAAAGACTCACTGTCCGTCTCCAGCAACGACGCCAGCCCGCCCGCCTCCGTGGCCTCCCTCCAGCCCCACATGGTAGGGGCGCAGAGCTCGCCGGGCCCCAAGCGCCCGGGCAACACGCTGCGTAAGTGGCTGACAAGCCCCGTGCGGCGGCTGAGCAGCGGCAAGGCGGATGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAAGGACTCGGACGACAGCGCGGCCACCCCGCAGGACGAGACCGTGGAAGAGAGAGGCCGGAACGAGGGCCTGAGCAGTGGCACGCTTTCCAAGTCCTCATCTTCGGGCATGCAGAGCTGCGGAGAGGAAGAAGGGGAGGAGGGGGCCGACGCCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGCACAGCCTGCTCCAGCCAGACTCCCAGGACGACAAGGCCTCTTCTCGGTTATTAGTCCGCCCCACCAGCTCCGAAACACCGAGCGCAGCCGAGCTTGTCAGTGCAATCGAGGAACTCGTGAAAAGCAAGATGGCTCTGGAGGATCGTCCCAGCTCGCTCCTCGTCGACCAGGGGGACAGCAGCAGCCCCTCCTTCAACCCTTCAGACAACTCCCTGCTGTCCTCCTCCTCACCCATCGATGAGATGGAAGAGAGGAAGTCCAGCTCTTTAAAGAGACGCCACTACGTTTTACAAGAATTAGTGGAGACAGAGCGTGACTATGTGCGGGACCTCGGCTGTGTGGTGGAGGGCTACATGGCACTTATGAAAGAAGATGGTGTTCCTGACGACATGAAAGGCAAAGACAAGATTGTGTTTGGCAACATCCATCAGATTTACGACTGGCACAGAGACTTTTTTTTAGGAGAGTTGGAGAAGTGCCTTGAAGATCCGGAAAAACTAGGATCCCTTTTTGTTAAACATGAGAGAAGGTTGCACATGTACATAGTTTATTGCCAAAATAAACCAAAGTCTGAACACATTGTCTCAGAATACATTGACACCTTTTTTGAGGACTTAAAGCAGCGCCTGGGCCACAGGCTGCAGCTCACGGACTTGCTGATCAAACCCGTTCAGAGGATCACGAAGTACCAGCTGCTGCTGAAGGACTTCCTCAAGTATTCCAAAAAGGCCAGCCTGGATACATCAGAACTAGAGAGAGCCGTGGAGGTCATGTGCGTCGTCCCGAAGCGCTGCAACGACATGATGAACGTCGGGAGGCTACAAGGCTTCGACGGTAAGATCGTGGCCCAGGGCAAGCTGCTCCTGCAGGACACGTTCTTGGTCACGGACCAGGACACGGGGCTGCTGCCTCGCTGCAAAGAGAGGCGGGTGTTCCTCTTCGAGCAGATCGTCATTTTCAGTGAGCCGCTGGATAAAAAAAAGGGCTTCTCCATGCCAGGATTCCTGTTCAAGAACAGTATCAAGGTGAGCTGCCTTTGCCTGGAGGAAAACGTGGAAAATGATCCCTGTAAGTTCGCTCTGACATCGCGGACGGGTGACGTGGTGGAGACTTTCATCCTGCACTCATCCAGTCCAAGTGTCCGGCAGACGTGGATCCATGAAATCAACCAGATTTTAGAAAACCAGCGCAATTTTTTAAACGAGTGAAAGCAGCAGCGGTAGCAACATCTCCACCATGTTGGTGACACACGACTACACGGCAGTGAAGGAGGATGAGATAAACGTCTATCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAATCAACAGAACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCCGAGGGCTGGATTCCGGGCTTCGTCCTGGGGCACACCAGCGCAGTCATCATGGAGAACCCTGACGGGACTCTCAAGAAGTCAACATCTTGGCACACAGCACTCCGCTTAAGGAAAAAATCTGAGAAAAAAGATAAAGACGGCAAACGGGAAGGCAAGTTAGAGAACGGTTACCGGAAGTCTCGGGAAGGACTGAGCAACAAGGTATCTGTGAAGCTTCTCAATCCCAACTACATATATGACGTTCCCCCAGAATTCGTCATTCCCTTGAGTGAGGTCACGTGTGAGGCAGGCGAGACCGTTGTTCTTCGATGTCGGGTTTGTGGCCGCCCCAAGGCCTCCATCACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGACGGTCACTACAGCATCTCCTACAGCGACTTGGGAGAGGCCGCTCTGAAGATCGTGGGTGTGGCCGCCGAGGACGACGGCGTCTACACGTGCATCGCGGTGAACGACATGGGGTCAGCCTCGTCTTCAGCCAGCCTGAGGGTTCTAGGTCCAGGGAGTGATGGCATCGTGGTGACCTGGAAGGACAACTTTGACTGCTTCTACAGCGAGGTGGCCGAGCTCGGCAGGGGCAGATTCTCTGTCGTGAAGAAATGTGATCAGAAAGGCACCAAACGAGCCGTGGCCACTAAGTTTGTGAACAAGAAGCTGATGAAGCGTGACCAGGTCACCCACGAACTTGGGATCCTGCAGAACCTCCAGCACCCGCTGCTGGTGGGCCTCCTGGACACCTTCGAGACCCCCACCAGCTACGTGCTGGTCCTGGAGATGGCCGACCAGGGACGGCTCCTGGACTGCGTGGTGCGGTGGGGGAACCTCACGGAGGGGAAGATCCGGGCGTACCTGGGGGAGGTTCTGGAAGCCGTGCGATACCTTCACAACTGCAGGATAGTGCATCTGGACCTAAAGCCTGAGAACATCCTCGTGGATCAGAGCTCAGCCAAGCCGACCATCAAGCTGGCTGACTTCGGAGATGCCGTCCAACTCAACACGACCTACCACATCCACCCATTGCTGGGGAACCCCGAGTTCGCAGCCCCCGAGATCATCCTGGGGAACCCGGTCTCCCTGACCTCAGACACGTGGAGCGTGGGCGTGCTGGCCTACGTGCTTCTCAGCGGCGTGTCCCCCTTCCTGGACGACAGCGTGGAAGAGACCTGCCTCAACATTTGCCGCCTGGACTTCAGCTTCCCAGAGGACTACTTCCAAGGAGTGAGCCAGAGGGCCAAGGACTTCGTGTGCTTCCTACTGCACGAGGACCCCGCCAAGCGCCCCTCGGCTGCGTCGGCCCTCCAGGAGCGGTGGCTGCAGGCGGGCCACGGCCACGGCAAAGGCGCGGGCGTCCTCGACACGTCCAGACTGACCTCCTTCATTGAGCGGCGCAAACACCAGAACGACGTTCGACCTATCCGTAGCATGAAAAACTTCTTACAGAGCAGGCTTCTGCCTCGAGTTTGACCTGTCTTGAAGTCCTTTCTCATTCTCTTTCACCTGCCAATCAGCCGTTAAGTCTGACTTTGTTTATTTTTTTTTGGAAGAGAAAACAACAAACCGACGACGACGTAAGCAGTCCGCTGCCCGATTGTCCCGTCGTGTGACACCGCGTGCGTTCCCGAGCGAGCTGTGCTCTGCAGCTGCCTGGGACTCGAGCCACAAGCCCTGCGGGGTGTGGGGGGAGGGGTGGAGGCCTTCTGGAACACTCTGCGAGAGCGGAGACAGCGTTGCTGAGTCACAGTCTTTTATTCAGGTTTCTGCAAAAAAAAAAAAAAAAAAAATTTTAAAAATAAAAAGAAACTTTTTTAAACGAACACGAATAGCATTTTGCAAATTGAAAACATTTTCCAGGATTTATTCAAGGAAACAAATGCCTATGTTCAACCACTGGTGTTAACGAACAAAACAAGATACTGGACACCTCTGGGGAAGAGCCCCCCCACCCTACCCCCAGCGGCGGCCTCGTCCAACTCGGGGGTCCCCCTGGCTCTGAGCTTTTTCCAGCTGCCCCGTCTGTGTGCCTCTCGCCAGGACGCCAGACTGGGCTTCTGAAATGTGCATTCAACCTCAAACTTTTGCATAAAAATAGAATGAATCGTTTTGCTCTGATGAAATGTAGGCCTTACTTGTACATAAGACTGGTCCTGCCTTCGGTCTGCCCTTTCCCTTCACCCCTGCCTTCCCGCCCACCGCCCGGGGCTTCCTTTAGGAGGGGTCTAAGGGGTCTGCCCATCCGCGAGGAGGTCAGGTTGGGTCCTGCCCTGCTACCCCCTCCCCACCCCCGCGTCCCACCCCCTAAGCCGTCAATCAGATTGTTGAGCAGTATACAGTCCGATGAAAATACTGTAAATGCGCTCATTGGGGTTTGTTTTTTTGTTTGTTTTTTTTTTTTTGGTTTTATTTCATATCATGTGCAATGTTGTGGCTTTAACATTTTATGCAACTATTTATGAAGACCTCTGTTGTACCTGTAATAAATATATAGAAAAAGCACATATTCGTACAGTGAGATTTATGGTTTTTGTGCGTGTATCGGGGGCGGGGTGGGGGGTGGGGTTCGTAGCCCTGTGCCATCGGTTCAAGGAGACAACTCTTGGTGAAATTTGTCAGTTTTGAGGACTGTACAAAGTGATTTCATACTCTGAATATAAAACTGGATAATAGGGTAATGTTTTAAATTTTATTATTCTATTATTCAGAATGCCAAAGTATTATTTTTTTTCCCAAAATCAGTCTGGACATTTCCTACTTTTTAGACTTTTTGACATTCAACTTTCTGTACAAAAATTGGCTGGATTTTGAGCTTTTGGTAAGAAATAAAAGCCAGTTAGGCACCAGCCGCCTCGAGGCTGGCTTTGGTGTCTGTGGCACTGTAGTGTGGGAGGCCCTCAACAAGAGACGCTGGGCTTCTGGGCACGCTTGAATTTTTCTGGATGTCTTTTTATCTTTGTTGTGTGAAATACACTTAAAAGACCAGCCCGCTTCCCAAGCCAGCCAGACACCTGGGTCTTCAGCCATAAACTGGCATAGTTCAAGCTTTGCAGCTTCCAGTGTATTTTTATTTATTCTTTTGTTGAATTTTCGTTTGTTTGTTCCTTGTAAAATTGTACAGAAACTTTTTAAAAGAAATTGGATTCAAAACTGGATGTGTATTCGTAACCTCACAACTTTTATTTGTGTATTGTTTCTTTTTATTATTTCAGTTAAAATTTTACATTATTTTGCATGTATATTTCTTTGTACAGAGACCTTACATGTTTACACAGTATGATGTGATGTAAATATTTTATTTTGCCATCAGTTATTTTAAAAAATTAAACATATTTGCCTG EMBV3_14829 TGAGTGAGTCAGTTTTTTGCTCTCAGGGGGTTCTAAGTGTTGGCAATTCAGTTTCAGCGC Gene BVT0102_441950 + 0 NULL GK000010.2:12176609-12218258 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019313 1 XLOC_009993 NonCoding TCONS_00019313 XLOC_009993 NonCoding NonCoding - 10:12189887-12190682 - TSS13203 795 1 TCONS_00019313_2 56 0.6 1 0 0.000895636273530008 0.00100168253681956 0.000147443140694131 1.19376789765939e-05 2.0700902653676e-06 5.94062492510469e-05 5.37935622268384e-05 1.48798369087115e-05 0.000367213437830479 9.83339194313565e-05 4.14873150405294e-05 0.000141720873672808 0.000101056478951815 0.000266263451851866 0.000272978203792934 0.00119951834360484 0.00024363947920567 0.000473413286970829 0.0018308029393412 0.00282670642835567 0.00134196982233135 0.0015917886745303 0.000296184380556436 0.000463425141052623 0.000741721505676017 0.000971237058534812 0.00314377883713664 0.000780295102188931 0.000107880207439483 0.000113438635018099 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 1e-74 284 77.53 0.442767295597484 NR_002756.2 RNU5A-1 Homo sapiens RNA, U5A small nuclear 1 (RNU5A-1), small nuclear RNA. 9e-45 185 94.87 0.145911949685535 0 noncoding 0 0 0 0 0.850608419347562 0.191742565667285 0.00975773786608351 0.864336428953568 AGGTTATACTCTGGTTTCTCTTCAGATCGTATAAATCTTTCGCCTTTTACTAAAGATTTCCGTGGAGAGGAACAACTCTGAGTCTAAAACCAATTTTTTGAGGCTTTGCTTCGGCAAAGCTACTTATCTTGGTTAAAAATAAGATCTAATTCATTTAACTAGCAAGTACAACTGAAGAGTTGGGGAAAGCTTGTTAAAGTGCTAAAAAGTTGGAGTAAGTTTGTTAAGCTGTGTGTTAACTGTTGGTTTTGAAAAATTATTGTATAATCCTTAATGATTGAATTGAAGATCTATGCGCCTTACTTTTACTCAGTTTCTGAGTGAGTCAGTTTTTTGCTCTCAGGGGGTTCTAAGTGTTGGCAATTCAGTTTCAGCGCTGGTGTTTCCAATGAAAATTCAGGACTGATTTTAAGATGGGATTGGTTAGTTTCTCTTATTGTCTTTTTCCAACACTATAGTTAATAAAGCATCAATTTTTCAGTGCTAAGTCTTCTTATTTGTATAGTTCAGTTCTCACGTCTGTACCTGACTACCAGGAAAAGCATATATTTGACGAGATGGACCTTTGTTGGCAAGGTTAGTGTCTCAGCTTTGTACTATGTTGTCTAGATTGGTTATATCTTTTCTTTCAAGGAGCGAGCCTTTTAATTTCATAGCTGCAGTTACCATCTGCAGTGATTATGGAGCCCCCGCCAAAACTTCTTGGACTGCTTCCCCGTATATTTGCTTTGCAGTGATGGGACCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTC TCONS_00016012 TCONS_00016014 . 5' 13280 TCONS_00016012 TCONS_00016014 . 5' 13280 EMBV3_21537 TGTACCGCCAAAGTGTCTGTCCCCTGAGTCCAGAGAATACTGAGCCGGTGGATCTGTCGT Gene GeneID:537594|PHACTR1:XM_002697584:451_cdna Constitutive 0 NULL GeneID:537594 23 GENE PHACTR1 NULL phosphatase and actin regulator 1 EMBV3_31046 ACGGCCATAAAACAACTCACCATACTACTGAAAGACCCACAGCATCACTCTATGAGCAGC Gene GeneID:781119|SLITRK6:XM_002691910:33_cdna Constitutive 0 NULL GeneID:781119 12 GENE SLITRK6 NULL SLIT and NTRK-like family, member 6 EMBV3_09578 TCTGCCTCCTCCTACAAGGACTCTTGTGGTCGCACTTAGGGCTAGATAACCCAGGATAGT Gene GeneID:282194|COL6A2:NM_001075126:9_cdna Constitutive 0 NULL GeneID:282194 1 GENE COL6A2 NULL collagen, type VI, alpha 2 EMBV3_39649 TCCTCTGCACGACTACAGGATTTTGATTGGCAGATAAAGCTTGCACTTTCTAGTGACAAG Gene GeneID:507292|COMMD8:XM_002688237:41_cdna UTR3_Alt 2 NULL GeneID:507292 6 GENE COMMD8 NULL COMM domain containing 8 EMBV3_24361 AGAACCAACGCTCAGGTGGTGGGACAGTATTTAAAGGATCTGACTAGAACTGAGAGACAG Gene GeneID:525909|CHST9:NM_001075879:7_cdna Constitutive 0 NULL GeneID:525909 24 GENE CHST9 MGC139330 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 EMBV3_12147 TACCTGTGAACCTGTCTTCCAGCCGTCACATTTCTGTGGGGATCCTGTTTGTACCTGTTC Gene GeneID:767880|LOC767880:XR_082726:122_cdna Constitutive 0 NULL GeneID:767880 26 GENE LOC767880 NULL hypothetical protein LOC767880 EMBV3_29360 TCCCCAGGCTGCCAAGCAAATCAAAGATGGTGCCTAGCGCCCCTGTGATTGACCTGACCG Variant GeneID:510595|FSD1:NM_001081518:9_cdna 382^503 1 EMBV3_19451 GeneID:510595 7 GENE FSD1 NULL fibronectin type III and SPRY domain containing 1 EMBV3_37797 GCTCTTCTTTGAGATAACATCCATGACCATTGCCCACTCAGCCTACCCATCTACCCAAGG Gene GeneID:540845|ALG11:XM_002691795:423_cdna UTR3_Alt 2 NULL GeneID:540845 12 GENE ALG11 NULL asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast) EMBV3_15153 TCTCAGGCCCTGCACGCCACCTCGCAGCAGCCTCTGAGGAAGGACAAGGACAAGAAGAAA Gene GeneID:540614|SEPT8:NM_001076230:63_cdna Constitutive 0 NULL GeneID:540614 7 GENE SEPT8 MGC140624 septin 8 EMBV3_07363 AAGGAAACTTTGGGGGTCACAGCTAGGCAACCAGAACAGAGGCAGAGAGAAGACCCAGAA Gene GeneID:788831|TTC25:NM_001103308:255_cdna Constitutive 0 NULL GeneID:788831 19 GENE TTC25 MGC157342 tetratricopeptide repeat domain 25 EMBV3_20689 ATGGCAGGTCTGCCCTGTAAGATGTGCTCTGGGCTCGGGAATTTCATGGGATTCATTAAA Gene GeneID:281276|LDLR:NM_001166530:276_cdna Constitutive 3 NULL GeneID:281276 7 GENE LDLR NULL low density lipoprotein receptor EMBV3_32696 TGACCTCTTCACTGACTACTCTTCGGTGTCGGGCTCTGAACTTCTACCCCCAGAACATCA Gene GeneID:497622|hfe:NM_001012399:47_cdna Constitutive 0 NULL GeneID:497622 23 GENE hfe NULL hemochromatosis EMBV3_32978 CCTGAAGGAAACCCACTGGCTTGATATTATTGTGACTCGTGTTGCCTTTGAAACTAGTCC Gene GeneID:535066|ELTD1:NM_001076908:71_cdna UTR3_Alt 2 NULL GeneID:535066 3 GENE ELTD1 MGC140518 EGF, latrophilin and seven transmembrane domain containing 1 EMBV3_03590 AGTGGGATGGCCCGGCTGGAGACTCAGATCTCTCACTCTGTAGAGTAACTGTCAGCATTT Gene GeneID:538933|TBX21:XM_002695918:283_cdna Constitutive 2 NULL GeneID:538933 19 GENE TBX21 NULL T-box 21 EMBV3_32759 GGTAGTGGAGGTCGAGAATCTTCCAAAGAGTCCTGGAGCAGACCAGCATGACAAGAAATG Gene GeneID:530941|EPB41L5:NM_001035384:20_cdna UTR3_Alt 2 NULL GeneID:530941 2 GENE EPB41L5 MGC128986 erythrocyte membrane protein band 4.1 like 5 EMBV3_22424 GCAGCTTTCGTGGGATCCGAGGGCCAGAGAGTCCTCAGGACCCCAGGGAACAATCTACAT Variant GeneID:615726|EIF1AD:NM_001076393:113_cdna 250^473 1 EMBV3_06508 GeneID:615726 29 GENE EIF1AD MGC140637 eukaryotic translation initiation factor 1A domain containing EMBV3_02686 CGAAGAGCAGCAGGTTACCTCTACGAGCCCAGAACAATTTTTAGTTAACTTGAGGATTGG Gene GeneID:508467|KIF11:XM_002698376:4_cdna Constitutive 1 NULL GeneID:508467 26 GENE KIF11 NULL kinesin family member 11 EMBV3_08479 AAACAAGAAGAACTTATAAGAGCCTTAAAGGAAATTAAACTGCCGTTTGTAAAGATGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11772 CTGCTGTGCGTGTCTCTTAGGAACATTTGAGAACTTCTGTAGGAGTAATGATGCCAAGTC Gene GeneID:509328|CSGALNACT2:XM_002698829:69_cdna UTR3_Alt 3 NULL GeneID:509328 28 GENE CSGALNACT2 NULL chondroitin sulfate N-acetylgalactosaminyltransferase 2 EMBV3_19435 ACACCGACATGGAACAGGGACTCACTGGGGGCATACTTCTCCGCCTTCCCACCACCCGGA Variant GeneID:506436|ZNF655:NM_001075261:101_cdna 376^588 2 EMBV3_29373 GeneID:506436 25 GENE ZNF655 MGC139342 zinc finger protein 655 EMBV3_43187 CACGGCTGCCCTGCCACCTGTGCCCACCCCACGATGGGCTCGAGGGCCTGTTTGAGGACA Variant GeneID:539321|SERTAD1:NM_001040564:709_cdna 411^631 2 EMBV3_41146 GeneID:539321 18 GENE SERTAD1 MGC128632 SERTA domain containing 1 EMBV3_30840 AGGGCCAAGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTCA Gene GeneID:613306|SMCR7L:XM_002687928:151_cdna UTR3_Alt 2 NULL GeneID:613306 5 GENE SMCR7L NULL Smith-Magenis syndrome chromosome region, candidate 7-like EMBV3_11444 ACGATGGGGCAGGAACAAACCCCTTCACAGACAGGAGCACATCAGCAAACCCCATGAAAA Gene BVV0102_122603 + 0 NULL GK000019.2:29661164-29670727 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096290 TCONS_00096295 TCONS_00096292 TCONS_00096291 TCONS_00096289 TCONS_00096293 TCONS_00096294 1 XLOC_057930 Coding TCONS_00096291 XLOC_057930 Coding Coding GAS7 19:29665958-29876650 j TSS71588 8135 1 TCONS_00096291_2 476 0.0721573448063921 14 0.961455401512167 1.35138924906102e-12 4.35419069998102e-29 2.0394484793565e-13 0.000184572317349183 6.34702296725991e-13 0.000339399891396345 7.8231617871439e-13 6.26185347215593e-18 0.000533202915442509 0.000298242423806327 4.89788277788093e-05 1.31582218975259e-11 2.91660828204876e-05 7.07154244731008e-15 7.36114899059687e-53 0.00751182833820202 0.0011283687376619 0.00349827818955411 1.46360252560624e-12 6.64807760230701e-21 7.96926952004496e-06 0.00209189739595787 0.00219488534258942 0.00194878680257657 6.14938538629974e-15 1.47022994668232e-12 5.143267253161e-11 0.000344030698261201 0.000257444593081195 6.40510546746945e-05 XM_005220391.1 GAS7 PREDICTED: Bos taurus growth arrest-specific 7 (GAS7), transcript 0.0 1.441e+04 100.00 0.982175783650891 NM_201433.1 GAS7 Homo sapiens growth arrest-specific 7 (GAS7), transcript variant c, 0.0 2854 86.15 0.30079901659496 TCONS_00096291_2 sp|O60861|GAS7_HUMAN GAS7_HUMAN Growth arrest-specific protein 7; 0.0 978 98.11 0.997899159663866 5 coding 0 0 0 0 -2.8105374520616 0.0157520988487723 0.0510819207847475 0.440425362130378 GAAGCCAGCGAGTCTCGGTTTCCCTGCGCGGGGTGCACGTCCCTCGCCTGCCCGGGGAACCCCGGTTACCCCCGAGACGGCGCGCGCCCAGAGCGCGGGAGCCCGGAGCGCCGGGCGCCTGGGACCCCGCGGAGCCGCTGCCCAGCCCGCGGGGCTCGGCAGGGATGCAGGCTGCTGTGTGAGCCCCGGCGCCAAGGCCATGTCCGGCGCCCGCTGCCGGACCCTGTACCCCTTTTCCGGGGAGCGGCATGGCCAGGGGCTGCGCTTCGCCGCGGGCGAGCTCATCACGCTGCTGCAGGTCCCGGACGGCGGCTGGTGGGAAGGCGAGAAGGAGGACGGACTCCGCGGCTGGTTCCCGGCGAGCTACGTGCAGCTGCTGGAGAAGCCTGGAATGGTCCCCCCTCCGCCGGGAGAGGAAAGCCAGACTGTTGTCCTTCCACCGGGCTGGCAAAGCTACTTGTCCCCTCAGGGCCGGCGCTACTATGTCAACACGGCCACCAATGAGACCACCTGGGAGCGTCCCAGCAGTTCTTCTGGGATTCCAGCCAGCCCTGGCCCTCACAGGAGCTCTCTGCCTCCAACAGTGAATGGATACCACACGTCAGGGACCCCAGCGCACCCTCCCGAGACTGCCCACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGAACCTGGGATCCTCATCACCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTGCGTGACGTTCCCTCACCCAGACACAATGCCGGAGCAGCAACTGCTGAAACCAACTGAGTGGAGCTACTGTGACTACTTCTGGGCTGACAAGAAGGACTCCCAAGGCAACGGCACGGTGGCTGGGTTTGAACTGCTGCTGCAGAAACAGCTGAAGGGCAAGCAGATGCAGAAGGAAATGTCAGAGTTCATCCGGGAAAGGATAAAGATTGAAGAGGAATATGCGAAGAACTTAGCTAAGCTCTCTCAGAACTCCTTGGCCGCACAGGAGGAGGGCTCCCTGGGAGAAGCGTGGGCGCAGGTGAAGAAGAGCCTTGCAGATGAGGCTGAAGTTCACCTCAAGTTCTCTGCCAAGCTGCACAGCGAGGTGGAGAAGCCCCTGATGAACTTCCGCGAGAACTTCAAGAAGGACATGAAGAAGTGTGACCACCACATCGCAGACCTCCGCAAGCAGCTTGCCAGCCGCTACGCAGCGGTGGAGAAGGCCCGAAAAGCCCTCACAGAGCGGCAGAGAGACTTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCCCGGAGGAAGTCCACGCAGGCGGGAGATGACCTCATGCGCTGTGTGGACCTCTACAACCAGGCCCAGTCCAAGTGGTTTGAAGAGATGGTGACCACCACATTGGAGCTGGAGCGGCTGGAGGTGGAGAGGGTGGAGATGATACGGCAGCACCTTTGCCAGTACACGCAGCTGCGGCACGAGACGGACATGTTCAACCAAAGCACAGTTGAGCCTGTGGACCAGCTGCTTCGAAAAGTGGACCCAGCCAAAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCGCCCCGTGGACATGGAGATATAGACGCACGGCCCGGGGGGTCCTACCGAGGAGGGGTTGGGGGTCCCACGGAGAGGAGGTGGCGCTCCCGCCGGGGGGGCCTGCTGTCGGGAGTGGCACTGCCCTCCCCCTGCTCTCCTGGTCCACTGAGGAGAGGGGACAATGATGCCAGAAGGGCGGCCCAGATGGCCCCACAGGGAGCTCCCCGGTGTTCCCAGGCCGAGAAGATGGATCCACAGCCCTGCCCTTGTCTCTGAGGCTGAAGCCCCCTGAGTCCCGTGCTGCGCTTGCCACTCCAAGGATAAACCGAGACTGGAACTTTGTGGTCCCTGTTGAGTACCAGAGGGGTCCCCTCCCCACCCAGAGCAGTTGTGTCCCATGCTCATGCCCCTGGAAGCCCAACGGCCCTTCTTCCAACTGACCTCCTTGTCTCCAGGCCTTTGGAGGGGCAGGGGAGGGAGGTCTCCGTCTCCAAGCCAAGTGTCAGGATCAGAGTCATGGAGAGAAGGCCACCGTTCAGCACAGCAGCCCGCACCCAGAATCCTTTGCAGCAGCCCTCCCTCTTGATTTTTTTTTCCCCCCTTGAATATTCTGAGGGCCTTGAATATTCTGAGGGCCTACATCCTGGCTCTTCTCTGCTAGTTTTCACCAATGGGAGTCTTGGGAAGAAGGTCTGGCTCCAGTTTTCCCAGACTGACCCTGCCTGGAGAGGTCAGGATGAAACTACCTCATTCAGCAAATTCATCCCAAGTTGGAGCAGTGAATCGTGTGCCTGTTAGATCAGGCATCCATGTCACGTGCTCTTTCCAGACATCCCAGTCCACCCAACCTGCAGCCGCTTCCTCGGGGAAGCCCCGTCCTCCACCCTCACCCATCCCAGGGAGCTGAGTCAGTCTCACGTCAGGGAGGGGTTGGGACAAGTCTCTGTCACCTCGCAGGTGGTTCTATCTGCCTGTGCACGGTGGAGTTGGGACTGCCATTCCGTGTGTGGCTCTCATTGGCGGGCACCACGCAGGCATTGCAGACTGTTGTGGCCACAGTACATGTCACCATCCAGGCAGTCGGGTACCTTGGCCTTTCAGCCCCTTCTGCACGTTCCCAAGCCCCACATGCAGCCCCTGCTTGGGGCTGGTGCCCCCTTGCCCTTTTGCCATCTCCTTTTTCCCTGGAAAGCCTGGTCTGCGCTGACCTGGGAAGCCACCGGGTCCTCACTCATCACTTTCTCGCTTACATACTAAATCTTGAGAATTGGCTTGAGGGGACTGGAAGCAGAATAGGGCTGGAGGAGGTCAGACAGCTTGCAAGGGGCACATTCTAGCCTGGAGCCCACACCCTAAGAACCCGTGTTTCTTCACTTTTCCCATTGATTACTTTGGGTTCACAGGACTCATGTCTCATAAGGGCAGCCATCTAAGAGGATAACTCACTGGTCTTTCTCTCTCCATCTTCCAGGCTGGTAACTGATGACTCGTTTTTCTTGTATCTCTTGGTACCCCTTTCTCTGAGTCAGTATGGCGCCCTCGTAGTGATAATAGAAAGATGCTGAATATCCTAAAGCAAACCAAGCTTTGCCACTTTTCTTCTCAAAACATCCCAACCAGAAAGGTCAGTGTGAAGGCCTTCACTAACATGCAGGCCGCCAGGACAGATCTGTGTCTGGTGTGGAGAACCACTCCTTCTCGTCTGGGGTTGGGCTGTGACACCAGCTGCCCATTTGGGGCTATCATTTCTTGGTTTCTTGATTAAAAAAAAAAAAAAAAGATTGGTGCTAGTAGTAACTGCTTTGTGGCTTAGTCAACTAATTTGTGGATTCAACTAATTTCCAACATTCAAAGCCAATAGCCTTGTTAACATAGATACGTTCATGTGTGATGTGGCTCATTGATTTTGTTTTCTCATCCCCATCTGAGGATTCCCGAGTCTTCTGTTATTCCCTGGGGCTCTCGCCTCTTTCAGGGTAGCCTGAGTTGGCCTCATGTAGGCCAGTCTATTTTCTGAAGTCATGCTTTCCCCCTTTTCCCTCAGTCTCGTTAGGCACCCCCATATACTTCTTTTCCTTTTTTCTTCCCTCCTTTATTCATTCATCAAGCATTTAGCTAAGCCTGGGCAGTATGCAAAGATCTAGGAACAAGATATAGCCCTATCTGTCATCAGGGAAACCAATGATCTGTTCTTTTGCGTAGACTCGTCTTTTCCCCAAGGGTCTTTCAGATGAGTAACCTTGGCATTCACCTACAGATACTCTCTGCAGAGTCTAGGTTTGCAGAGATACCCTCTGTTGTACTGATAGCTCTTCATTCATTCACTGATTCTCATTCATTCATCTAATCAGCAGACACTTGGGGCAAGCCAGGTATTATACAGTACTGCAGCCATAGCTGCATACCAGCCAGGAACTCCGCCCCATCCCCCAGCCCTTCTGTTCTCCATAGGGACAAGCGCATGTTTTCAGACCTTTCTGGGAAATGAGAGCCTTGCACCTCTTCCACGTTTAACCTACTGCTAGCCTGTAATAAGCCGTGTGGCATTTACCCAAGGACGGAAGAACCAGAGAGTACCAAGAGTACAATCATGGGGGCACTAGACCCTCACAGCTCACATCCAGCTCAAATTTGAGAGATTTGTTTGTTTTAAATAATTCTTGCTTTACACAGAGGAAGCATGAAGCCCAAGGCCAGCCAGTGAGAGCTGTGAACTGAATAGCGAATCACGAGCAGGGCTGGAGTTGAGAGTACAGGCCTCTGTCCCTGTGGTTGGGAGGAAGTCATGTCTGAGAGTCATCTTCAGAGTGGTGCTCTGTCCTTGTGGTTGGTTTGGTTTGGGTTTGGGTATTTAGGTTATAAGAGGATATGCTTGGCTTTTTTCAGGGTGAATGACTCCAGGTTATTCGTGAGCACATCCACTGTTCCATTTCTGAGAACAGGTGAGCCCCTTCTACCTAGGAGACACGGATGCACTTTGTTTCATCTGTGAAAGCCTGATTTTTAGAATAGAATCTAAGACAGTTACCAAGACAACCTCCAGGATAAGCTGCTTGTCCCTCTCTCTCTTTTTTTTTTTTTTTCCTATTGCTTCTGATCAGCGTTGGAAAGCACTGGCCAGCTGACCCACAGGGATGGATGACCTGAGGTTCTTCCCATGGGAGCACCTTGGGTCTCCTTTTAATCTACCCAACACCTGTGTCAGCTGGGGAGCAGGGAAGGGTGGGTTGGATTTCTTTGAGGGGGAAACACTTCTTCCCTCACTGAGGCTGATTAACAACTGAAGCAAATAGAAAAACCCTGTGTATACTCAGGAACCAGGGGTTTGTATTCCCTTTGTGGAAACCAATCAATTACTAGATTAGGAGATGGAAGCAAAGAAGTCTTGGCAGAGCCAAAGTCCCTTCTTGGAAATGCAAGCCATAAGATTCCGAGGACATCAAAGACCTCGGCTTGTTTAAGTGATTTTACTTCCAATGGTGAATGGCCTTGACAAGGAGAATTTATACAGGATTCTGCAGACCTACTGGTGATTATGTAGATAGGGAAAGTTCCTGGACCAGTGTTAAGTGGGGCACAGATCAGAAGCACACTTCCTTAGCCAGCATACCGTTATTTCCATAAACCTTCCTGTCCCCACAGGTCCCACTGCCTTTTTTTCCAAGTTTATTGAGATATTTGACATTCGAAATTGGGGGTTCATGAGCGTACAAGAAAATTCACCCTTTTGAAGGATACAGTTCAATGAATTTTGACAAACTTACAACAGTCTTATGGGGCTTCCCTGGTAGCTCAGATGGTAAAGAATCTGCCAGGAATGCAGGAGACCCGGGTTCAATCCCTGGATCAGGAAGGTCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGACCCTGGCGGACACATGGGGTCCATGGGGTCACAAAGAGTTGGACACGACTGAGCAACTAACACTTTGACACGGTCTAGTAACCACTGCTGAGATCAACATAATATTGCCATCACTCCAAAAACATCCCCTCATGCTCCTTTGATGTCCATCAACTCTTCCCAGCCCCAGCACCTGGCAACCACTGATGGATTTTCTGACCCTGCAGATCTGCCTTCTGTAGTGTGTCATAGAAATAGGCAGAAGCCTTTGAGTCTAGCCTCCTCGCTCAGGTTGATGCCTCCGAGTCACCTTGTCGTAGGATGTCACTAGCTTGTTCCCTGCAATGCCCAGTAGCCGTCCATTGAATGGGTGTACCCCACTGCTTCCTTGCTCTTAAAAACACAAATTGTCTTCCTGGAAGCTCCTGACCTGGAGTCTTGAGCTTGTTTGCACAGCTACTTCCAGCCAGCTGCATCCAGTGGTTCTTGGGACTTACACTTGGCTTTTTTTGAGTCATTTTAGTTTGGGGAGCATCTAACACTTAAGTTTTTCACAATGCAGAGAGCTGCTGGGGATGGAGGCGGGGATGGCGGACAGGGTCTCTGCTGCCCCCTGAAGCTGGTATCTCAGCTGGTAGATCCACTTGCTCCTTGGGACCCTCCCTTCACCTCGCCCAGTCCCTGCCATTTGGTGAGAGTTCAGGGGTGTGGGAGGTGGGTGAAGAGGGTGTGGGTGAGAAAGCAGGGGGCTGGCCATGGGCTCAGCACCACCTTTCTCTGGATCTTCCTTCACCTGCAAACTGAAGGTGTTTATTCTAGAACATTCTCCCAGGCCTCCTCCAGCTGCTGCATTCTGTCTCCTTCCGTTCTCATTTCCAGTTTTGTGCCCAATGCACATGTCATACCTAATCTGGGTCTGCTCGGCACAGCTGTGCATGCTGTCACCTCACACCTTCCTGAGAGGGGGCCCCGGGTGCTGAGAAATCTAAAAAGAGATTTTTAGACACAAAAACTTAGAGTTTCATGAGCTGTTGAGAATGAGGTAGTTCCTCCTCCTCGGACTCCTAAAGAAAGCAGAAGCCATTACCTTTCATCCACTGATGTTTGACACCATATCCCGAGGGTCACTTCCAAGGAGCAAAAACAGGCATGGTGTCAGAGCCCCCTCCCTTAAGGTCCTTGTCAGCGCCCTAGCCTTGCTTACCTGATCTATGCCTGCACCCTCCTGGGTGGTGGCAGAGAGAAAACCACACCCAACTGCTGATGCTGGTCAGCTCTGGCCAAGATCCCCAAAGTAAGGACGCCTCCAGCTACGTCCTGATTGTGCCCTGCTCAGTGAAAGCTGAGCCCCAGAAAGCAACCAGGTACCTCTCCCAGCCAACAGAAGACATCCTTGGGTCCAGCCAGGTGACGGTGTGGGCTGTGGAGCCCACAACACAGGATCCCCCGCTGCCAGGATGCCTCTTTTTTCTGGGGGAGGGGGGCCTGGGGGCTTTCAACATCTTCCCCACTCCACCCCACCCCCACTGGAGTAATTTCTATCGGGCCCTTTGTGAAGGTGGGGGACCCAACCCCTCTTTCCTGGCTTGGTGAGACTAAGGTGACAAAAACCAATGTTCTGTTTCCCCTGAACCTTCTAGATGCTGGGGCATGGCTACTGGGGGACCTTGTTGGAAGGTGTCTCCGAGGGAGAGGGGCTGTGATGCCTTTGGATCTCTGTGCTGTTCGGGGGACTTGACCCTTTATGTGTGATGGGGCATCCCTAACGGGCTTGCAGTGGTAGGAGGCAGAGGGTCAGGCACACGGGTACTCATGGGGACGGTGTGACGTGGTGACGAGGAAGGAAAGCATAATGAGCCAGGGCAAGAGCACCAGACTGGCCCCGCTCTGCTCTCATTCGTCCCGTAACCTGTCATTGTCCCATCCTCTCCCGGGACCTGGGCGTTTGTTGTCTGTCGAGTGGAAGTGCTCTTCAACTGGCATTGCATGCAGCAAGAGACCAGCTCTTGGGACAGGGGCCTCCAGGCAGCCTTGTGGACCCAGGGACAGTCATTCAAAGGGACACATGCCATCCTTGGGGACGGGGCCCCAAATCGGTATCTCTGCCCTTCCCTTAGGAAGGGGACGATGGGGCAGGAACAAACCCCTTCACAGACAGGAGCACATCAGCAAACCCCATGAAAACGGGATTTTCTAACAAAATAAACTTGCTTGTTTGCTCTGTTTTCTGTAACTTTTGCTAAATACTTTATACATTTTTAATGTTAAAAAGCTGTGTCTCCTCCAGCATTCCTCATCCCGGTATGAATGTGTTTATTTCATGTTGTATATCCTTCCATCCCCTGGCTGCCTAGATCGGTAAATAAAGTTGATGTACTATAATTTATAAGTAACACTGTTGAAACTCTGATCCCTACAGAGGCTATAATCCGCCCTTCCAACCCCACCCCCGTAATAGCATTCGTGTGTATTAATGCTGAAAAATTAAATGTTTAAATTTTGAAGGCGTTTGCTCTATATAATTGTTCTGCATTATTATAAAGCATTTTCAGGAAGTTAAATGCTCTCATTTTTTCCCCCTTTGGCTCTGTGTGTACACTTGAGATGCTTAGATTTCGTCCTGTGTAAAATAAACTGTCCAGAGACAC EMBV3_29211 GAGTCTCACAACTGTCCCAGGCCACCAGACTATTGGTATTTTGGAAAGCCACTCAGGAGA Gene BVT0102_096047 + 0 NULL GK000029.2:17975485-18039840 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163215 TCONS_00163217 1 XLOC_099825 Coding TCONS_00163215 XLOC_099825 Coding Coding KCTD21 29:17956839-17977765 o TSS122353 3248 1 TCONS_00163215_3 260 0.151477832512315 2 0.844874551971326 0.000142411037883979 0.000167339858685041 4.24686636019543e-05 3.44303682584396e-05 7.14221554787217e-05 0.000118926549100122 6.10213892425773e-05 0.000615484473169271 0.000117314976938071 8.96499794492532e-09 4.21896682168483e-06 6.71391405432798e-05 0.000102461964531598 0.000349013893300423 9.00210777370856e-09 0.00147315258359488 8.12274944851927e-12 0.000254824570501931 9.93202795898603e-05 0.000454969135302964 2.50897517704492e-06 0.000271847223314377 0.000446236096246236 0.000258006813965198 0.000107713857815764 1.48025430009828e-05 0.000133465687399627 4.1359973367679e-05 5.95704899339292e-06 1.66338427592704e-05 XM_005226714.1 KCTD21 PREDICTED: Bos taurus potassium channel tetramerisation domain containing 21 (KCTD21), transcript variant X1, mRNA. 0.0 5849 100.00 0.998152709359606 XM_005273925.1 KCTD21 PREDICTED: Homo sapiens potassium channel tetramerization domain containing 21 (KCTD21), transcript variant X1, mRNA. 0.0 1876 76.45 0.774630541871921 TCONS_00163215_3 sp|Q4G0X4|KCD21_HUMAN KCD21_HUMAN BTB/POZ domain-containing protein KCTD21; 0.0 540 99.62 0.996153846153846 1 coding 0 0 0 0 -0.00931587178526833 0.944191671594615 0.0227705979909524 0.727279167286487 CTCGCAAAGCTGCGCTGGCCGCCCGCGGAGGGGAGGTTGCTGAGCGAGGGCAGGAGGACTATTTTCCTGCACCCCAGCCTTCCTGCCATGTCTGACCCCATCACGCTCAATGTCGGGGGGAAGCTCTATACAACCTCACTGGCAACCCTGACCAGCTTCCCTGACTCCATGCTGGGTGCTATGTTCAGCGGGAAGATGCCCACCAAGAGGGACAGCCAGGGCAATTGCTTCATTGACCGTGACGGCAAAGTGTTCCGCTACATCCTCAACTTCCTCCGAACCTCCCACCTGGACTTGCCCGAGGACTTCCAGGAGATGGGCCTGCTGCGCAGGGAGGCCGACTTCTACCAGGTGCAGCCCCTGATTGAGGCCCTGCAGGAGAAGGAGGTGGAGCTGTCCAAGGCCGAGAAGAACGCCATGCTCAACATCACACTGAACCAGCGTGTGCAGACGGTCCATTTCACCGTGCGTGAGGCACCCCAGATCTACAGCCTCTCCTCTTCCAGCATGGAGGTCTTCAATGCCAACATCTTCAGCACCTCTTGCCTCTTCCTCAAGCTCCTCGGCTCCAAGCTCTTCTACTGCTCCAATGGCAACCTCTCCTCCATCACCAGCCACCTGCAAGACCCCAACCACCTGACTCTGGACTGGGTGGCCAATGTGGAGGGCCTGCCAGAGGAGGAGTACACCAAGCAGAACCTCAAGAGGCTCTGGGTGGTGCCAGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCTCAAGATTGCGCTGAGTGATGGCTTCTGCATCGACTCTTCTCACCCACACGCTGTGGATTTTATGAACAATAAGATTATTCGATTAATACGGTATAGGTAAAAGGACCCCAGCAACACTGGAGGGGGTCTTCCCAAAGCCAGGATGTTGGAGAATGTCTCACCGGTGGTGTGAGGCAGGGTACCATACTAATCTGCATTAATCGTATAGCAGGACTTGATTCCCCCCAACAATGCAGTCCACCCATAGGAATCTGTGTGTCCTCTTGACACAGCCACCTTTTTCCTTGCCGCTTTGAGCTGGAGATGGGCAGTTTGCTGTAAGTGAAGTCTGCCATCATGTCCTACAGGAGGACTTCCTGGCTAGATAGAAAACAGCACTTTTCCCTTGGACTCCAGCTCTCTCTGTACCATGAGGCACTGCCTGCAGCCCTTCCTTTGGTAGAGGGGGGTGAAGTGAGAATAAGAGGCTCCTTCTGGTTTCTCAGAACAGGAATTCCCCAGAGATTCCCATCCTGCCTGCCCCTCCATCCCCGGGATGTGGCCAGGACCTGGGGCTTGCTTGGCTGGCTTGGAAATGAAGTAGGTAGTGGGGGTGGGATTTGAGCTGGCCCGGCATAGAGGAGTGAGTCTCCAGGCATGTTCAGAAGATGGGGTGTCCCTCTTGACAGGGCCAAATCTAGGCATCTTGGGATTCCTGGCTTCAGGAATGAGCTGCTAATCCCTGTGAAGATTTGAAAGTATCTGGAGCCACTACAATGAAAGGCACTTCATCATGTGGCCTGATCCCTGACTTCTTTCTCCAAGAATTTGAAGTGTCATTGAAACAGATTCTTTTAAACAAATATATTATGCACTCTCAGGGTTGGAAAATAATTCAACAGTCATTTAGTGCTCTCCCACCCCAAGCACACCCCAGCACATTTGAGGCTGAGGGCTTCCCCCCAGTACCTTCAGGAGATAACTATCTCTGCTTACATACTCTCAGCAACAGAACATCCGTCATCCCCACAACCAGCCCCTGTCATGGCTGGCTGTTAGAAAGTCCTTCCTTATCTTGAGCTGAAATCTGTCTTCCCACAAGCATTTTCTGTTCCTGGTAGACCTTTCTTCTCACCCAAATGTGTATTTTGTTTTTCAGAATAGTCACTTTGAGAGAGGCCACATACCTATTCTGAAAATATTACTACTTGGAATTAGGATTCCCCTTGGGATTTGTCTTCAAAACCAAGGTTAGCCCCCTGACATTCCCTGTAAGTCATCCCTGTCCCTGTAGGTCATCCCTGTTTTTACAGCTTCACTTTGTTTATGACCCTCCCTCCTCACCAGACATGACCCTGCATAGCTTTTGACCATCTTCTGGTAAGTTTGAAGATTGCTTCCCCAGAGGAAGGAGACCAGGGTCTTGGCAGTGTGTAGCAAGGAGCCCAGGAGTGGTCTGAACCATAACACTGCCCTTGGAGGAAGTGTCCAGCACCTATAACACTGCTCTGAGGAATGTGGTACTGTTTCTGTGCATAACCAGTCTGTTGACTTCCTTGGGGTGAGACCCAGGGCAAGACACCCTGAGCCACCACTTTCCAGGGGTGATAAGCAGTGCAAGTCTCAAAACTGCATGTTATGATTCATCCCTGGAATGAGGGTGACCGTGGAAGTCCCACAGTCTTCCCCACTAGGCAGGGGCCCTCAGACAAAGCCAGAGACGCCTGGTGCCACAGGTACCCCAGGGGATGGGCTGAGGAAGGAGCTTGTGTGCTCAGCTGTGGGAAAGGCCACATTCCTTAAGTAATAAAGGTCTTCCCCGCCCCGCCCCCCCCGGTACAGTGGGACCCCTGAGTCTCACAACTGTCCCAGGCCACCAGACTATTGGTATTTTGGAAAGCCACTCAGGAGAACACAGTTCAGACCAGCCAGCAGAAGGTGTGACCACAGCAGAACAATTTAAGGAAGAAATCTCATAAATCACTACTGTCCCATGTTCCTTTTCATAAAAAGTATTTCTCCGTCTTTTTGGTGCTTCTTAATTCAAGCAGCTTGACTTTAGAGAAAGCACAGGACCTGTGAAGCCACTAATTTGCTGTGTGACTTTATGCAAGTCACTCACCTCACTGAGCCACCTTTGTTTCTTCATCTGTGAAATGGGCATAACAGTAACCCATAACCCTATCTACCTCACAGGGCTGTTGTGAGGATCAAATGAAATAATGTATATGAGAATACAGTATAAATGATAAATGGTTGTTATTATTTTGTGTCTACATATAAGGGGAAAAACCTTGGCTTTGGAATCAGGCTGACCTGAGTCTCAATTCTGGCTCCAGCACGTGCTGTGTAAACTTGGACAAGTCCCGGGGCCTCCCTGATTTGTTTCCTCATCTGATGACAACCCCACCTCCCAGTGTTATGTGACCTGGTTGTGTATGTGAAAATTCCTAGCTAGGCCTGGCACATAGCTCAATAAATGTTTGCTCTCTTAGAAGT TCONS_00163218 s 5' 0 TCONS_00164567 r 5' 6931 EMBV3_39847 CCTCAGCAAAGTGGAGACTCTCCGCGCCGCCATCGGCTACATCAAGCAGCTCCAGGAGGT Gene GeneID:540730|ASCL4:XM_002687676:64_cdna Constitutive 0 NULL GeneID:540730 5 GENE ASCL4 NULL achaete-scute complex homolog 4 (Drosophila) EMBV3_19845 GAGATTAAGCGATAAGAATCCCAGCTCCGTGACCTAGAGCAGCACTCAGAACAACAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37722 CCTTTGCCTGCCTTTTTGATGATGGGTCTCTTCCCTAAGGTATATGTTGGCAGGACCACC Gene BVT0102_222357 + 0 NULL GK000015.2:76790779-76794435 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060090 TCONS_00060089 TCONS_00060088 1 XLOC_036579 Coding TCONS_00060089 XLOC_036579 Coding Coding CRY2 15:76770262-76792101 j TSS44965 3457 1 TCONS_00060089_2 415 10 0.842155875080136 0.000214275381265938 7.29814423915194e-08 8.44908085449677e-05 0.000161083380578828 0.000222530817638998 5.15971673632258e-05 3.78637038262157e-05 8.37383648624086e-13 0.000545175494826046 0.000691505366419012 1.44791252439193e-05 2.07519997170585e-06 2.55302974370319e-46 9.37147009329932e-06 5.47941055281371e-06 0.00148878810881856 0.000217004781330101 0.000274852447378512 2.72399392285858e-08 0.00147859711878458 1.23040805307931e-07 0.000310828355230981 0.000638113431816905 2.98168602305683e-08 0.00168029951407897 6.79498368188616e-05 5.34777411307677e-06 7.65318207919879e-05 2.43042936174092e-05 0.000291538725887784 XM_585942.7 LOC509058 PREDICTED: Bos taurus cryptochrome-2-like (LOC509058), mRNA. 0.0 6170 99.85 0.993057564362164 NM_021117.3 CRY2 Homo sapiens cryptochrome 2 (photolyase-like) (CRY2), transcript 0.0 2239 85.74 0.55886606884582 TCONS_00060089_2 sp|Q49AN0|CRY2_HUMAN CRY2_HUMAN Cryptochrome-2; 0.0 784 95.40 0.992771084337349 1 coding 0 0 1 0 -0.0320104913819804 0.765631002226805 0.0025365138377578 0.963527160893038 GAGGGGAGGAGAGAGGAACTGAGATGAACTAGCCCGGATCATTGAGCTGAATGGGCAGAAGCCGCCCCTTACCTACAAGCGCTTTCAGGCCATCATCAGCCGCATGGAGCTCCCCAGGAAGCCCGTGGGCTCCGTGACCAGCCAGCAGATGGAGGGCTGCCGGGCCGAGATCCAGGAGAGCCACGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGATTCCCCACTGAAGGGCTCGGCCCAGCGGTCTGGCAGGGAGGAGAGACGGAAGCGCTGGCCCGCCTGGATAAGCACCTGGAACGGAAGGCCTGGGTTGCCAACTACGAGAGGCCCCGGATGAACGCCAACTCCCTGCTGGCCAGCCCAACGGGCCTCAGCCCCTACCTGCGCTTTGGCTGCCTCTCCTGCCGTCTCTTCTACTACCGCCTGTGGGACCTGTATAAGAAGGTGAAACGGAACAGCACGCCCCCACTCTCCCTGTTTGGGCAACTCCTGTGGCGAGAGTTCTTTTACACGGCGGCCACCAACAACCCCAGGTTCGACCGCATGGAGGGGAACCCCATCTGCATCCAGATCCCCTGGGATCGCAACCCTGAGGCCTTGGCCAAGTGGGCCGAGGGCAAGACAGGCTTTCCCTGGATCGACGCCATCATGACCCAGCTGAGGCAGGAGGGGTGGATCCACCACCTGGCCCGGCACGCTGTGGCCTGCTTCCTCACGCGCGGGGACCTCTGGGTCAGCTGGGAGAGCGGGGTCCGGGTGTTTGATGAGCTGCTGCTGGACGCAGACTTCAGCGTGAACGCCGGCAGCTGGATGTGGCTGTCCTGCAGCGCTTTCTTCCAGCAGTTCTTCCACTGCTACTGCCCGGTGGGTTTTGGCCGCCGCACAGACCCCAGTGGAGACTACATCAGGCGATACCTGCCTAAACTGAAAGGGTTCCCCTCCCGGTACATCTACGAGCCCTGGAATGCCCCAGAGTCCATTCAGAAGGCAGCCAAGTGCGTCATTGGCGTGGACTACCCCCGGCCCATCGTCAACCACGCCGAGGCCAGCCGGCTCAACATCGAGCGGATGAAGCAGGTTTACCAGCAGCTGTCCCGCTACCGGGGACTCTGTCTGCTGGCATCTGTCCCTTCCTGTGTGGAAGACCTCAGCAACCCAGTGGCAGAGCCCAGCTCGATCCAGGCAGGGAGCTCAAGCAGTGTAGGCCCAAGACCACTGCCCGGGGGCCCAGCGTCTCCCAAGCGCAAACTGGAAGCAGCAGAGGAGCCGCCTGGTGGAGAGCTCAGCAAACGGGCCAGGGTGGCAGAGTCGCTCCCCTCAGAACTGCCGAGCAGGGGCGTCTGAGACTGCAGTGCCGTGGCTCCGTGAGCAAAGCTTGGGTGCCCAAGCCGCCACCGTGGCAGCGGAGTGCAACCTGCAGAGCTGCTGATCACCTGCAGAGACGGAGCGAACGTGTGTGCGTGTGTGTGCGCGTGCGGAGGAAGGAGGGCCACCTGTTGTGTGTGCATGCATCTGTGTACACTCGTGTGTCTCTGAACGCTGTCTGGGCCGGAGGAGGACGGGTAGCAGCTTCACCTCAGCCTCCAGACCCCGGACTAGAGGTCACGGCGGTGGCGGTCACCCCATACCTGTCCCTGGGGGCCTGCTGCCTCTTCTGCCTAGAAGGGTGGTCAGACCTTAGGTGGGATTCTGACACCTGCTCCCCTTCCCCTTCCCCCTCCATGTCAGACTGAGGAGCAGGGGAAGCATTTCTGGCTCGTGTGCAGAGTGGGATTCTCGAAGCAGCGAGGGGCCTTCTGAGTTCCTGCTTTATGACCCCCGAGGGCCGGGCAGGCTGGAGGGGACAGGTGCTGTCCAGACAGTCACCTGGCCTGGCTTCTTCTTTTAAAATTCCCTGCCAGTGGACTCCCCAAACTCTTCCTGGGGGAGCTGAGGCTGAGCTGTGGCCAGATCTGCAGCCTTTCTGCCACATACAGAAGAGCACCAGGGGCCTGACCTGAGTGCCGGGTGTGCAGCCTGACAGGTAGTAGCAGAGAGGAGCCTCTCACTCTTCGGGGCTGAAAACCTGAGGCTAGGAGTTAACCCCTGCTCTCACCGCTCCTTCACGGTCAGAGCGGAGCATCCAGTAGGAGGAGGCCAGGTTCCTGGTGGTGGAGGGCCCCCTGGCTCCCCTGGCCACACTCCATGGCACCTCAGTCCTGCCCCCGAGGTCGGCTGATGGCAGCCAGGGAAGCCATTGTCGTCTGCCCGGGGCTGGTCAGCACCGAGCTACCGCATCAGCCCTCCCGGTAGCTGGACATCAAGGGCCCAGGCAGGTGCACGGCCAGGGACAGTTGGGAAGGGCCCCAGCTGAGGTCCCGGCCAGCGCACCAACCCTTCTACAGCAGGCGGGATGTTTGACCCAGAGAAGCCAAGGGCTTGCAATCCAGGGGCAGCCGGTGCTCCCACATGAACCCTCCCACTGCTGGAGGTCTGTGCTGAGGAGGACCCCACGGAAAGGAGGACTGTGTGGCCGGCTGGACCACGTCTTCCTCCACCCATGGCCCAGACTTGAGCCACAGCATGCGCACGCACAGGAGTGTGTGCAGGTGTGTGTGTGCCTGAGAGACAAACCCCTCATGGGGTTTTTGTCCTCACGTGTCACATTAAGCTGGCCCTGGGCCTTCTCTCTACCTCCCCTGTGACCTTGTCCCAGCCCTGCCCCCCACTCTCCTCTGTCCTAGGAGGACCCAAACCCTGGGTCAGGCCCCTGTCTCCCGCATCAGTCCAGCACACTGACAGGCTTCTCCCTGAGATGTCCTCAGGCTTCCTCAGCCGGAGAGCTGCCTTTGGAGTCCAACTGTTGTATCTGTGTCAACCCATGAGAAATGTCGCGTATTGCATGGGGGAAACAGCTTTTTCTGCAGTGTTGGGTTGGGGGCTTTACTGCTGTCTTAGCCCTAGCCAGGAGGAAGGGGCATCGGGGGCTGCTGCTGAAAGGAGGGGAGAGCAAGCCTGGAAGGACTGAGCAGAGAAACTGGGACGGCCGGAGGGCTTAGGGCCAGAGTCAGTGCTTGTCTGACAGCATCTCAGACGGCAGGATGATTCCCTTTGCCTGCCTTTTTGATGATGGGTCTCTTCCCTAAGGTATATGTTGGCAGGACCACCGCCCCCTACTTCCCTACTTTCCCTGGCATGCTGGCCCTTTCCCAGTGGACTGGAAATGAGAGGGGGTATCCAGTGGCCTGAAGCTCTGTGATGGCTTCGTGTCTCCCCTCTCCTGGCCCAGGTGTCCCTGGGGGCTCCTGCAGAGCACTACCCCAAGTCCTGACCCAAGGGCCAGCATGGGGAGGAGACGGTCGCAGGCCACATGCACTTTATATGGAGATTTTGTATTGCTAGAAAGTGTGTTTCTCCCACAGTTTGTGAATATTCATGTGTTTCATAAATGTCTGATCCTATCTGAGCAAA EMBV3_26986 TTTTCCTCCCTGGGTTATCCTGACTTTTCAGACTCTTGCCCGGCCCCACCCGATAAGACT Gene GeneID:100295891|LOC100295891:XM_002698000:97_cdna Constitutive 0 NULL GeneID:100295891 25 GENE LOC100295891 NULL hypothetical protein LOC100295891 EMBV3_15535 CACCCACTACTGTAGGGTTTTTTTTTTACCATTGTTGGACCTGGTAAAGGGGGAACCGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02230 AGACCAGGAGCTATCTGCATGTCACGTTTATTGGATGGCCAAGAACACAGTTATTGGGAG Gene BVV0101_033786 + 0 NULL GK000029.2:18427276-18444586 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32629 AGTTTAAAAATGCTTCCATATTCTTTGTTGGTATTGTGCCACTGCAGAACTTTAGTGCAG Gene BVV0101_036923 + 0 NULL GK000016.2:29991002-29993987 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068957 TCONS_00068958 TCONS_00068962 TCONS_00068959 TCONS_00068963 TCONS_00068960 TCONS_00068961 TCONS_00068956 1 XLOC_041832 Coding TCONS_00068956 XLOC_041832 Coding Coding LOC534587 16:29992614-30039622 j TSS51518 2457 1 TCONS_00068956_4 189 9 0.947922649818112 2.28511274866788e-29 8.59720774076875e-69 2.53997729941682e-37 6.99999850768331e-39 8.44207617726019e-26 6.67259359906386e-33 3.06449397743999e-28 2.65750653184041e-27 4.18195746824775e-40 9.5539942383218e-30 1.2482724511601e-10 4.42891475186789e-05 8.80781164641396e-36 2.26691325040348e-76 1.29894790669473e-27 0.0018081117126444 1.44399795901301e-114 0.00166031819682603 4.5214932804684e-19 3.48413412202379e-22 6.25373639491706e-25 0.000125577923584494 0.000167369062179962 0.000241269603433173 1.45504371817474e-22 3.66911470590356e-39 1.53532282750375e-31 1.50069569804574e-15 2.18866760421846e-42 9.67528107668328e-05 XM_003587058.2 LIN9 PREDICTED: Bos taurus lin-9 homolog (C. elegans) (LIN9), mRNA. 0.0 4183 99.96 0.945054945054945 NM_173083.3 LIN9 Homo sapiens lin-9 homolog (C. elegans) (LIN9), transcript variant 0.0 3202 91.04 0.945868945868946 TCONS_00068956_4 sp|Q5TKA1|LIN9_HUMAN LIN9_HUMAN Protein lin-9 homolog; 6e-135 393 99.47 0.994708994708995 0 coding 0 0 0 0 -0.233107700845927 0.286141033775925 -0.0199764865445103 0.663601424751615 ATTGAAAAATGGCGCTTGCCAGCGGCAGTGTCATGGTTGAACAAGCTTCCAGAAATGCCTGCCACAAGTGTCTTTTTCCCCTGGATGAGCTCCACTTGGCTCCTGCCTCACAGGGAGGCTCTCCGAGATCAGCAGCTCGATTACGTGGTGTTCATGATGGTCTCTTCACTGGACAAATAGATGCTGTGGATACTCTTAATGCTACTTATAGAGTAACATTTGATAGGGCAGGGCTTGGAACTCATACTATCCCTGACTATGAAGTTCTTAGTAATGAGCCTCATGAGACGATGCCAATTGCTGCCTTTGGACAAAACAGCGGCCTTCTCGATTTTTTATGACTCCACCACGGTTACATTATACTCCTCCTCTCCAGTCACCGATACAGTAAGATAATGATCCCTTATTAGGACAGTCACCTTGGAGAAGTAAAATTTCTGGCTCTGACACTGAAACATTAGGTGGTTTTCCAGTAGAATTCCTTATCCAAGTGACCAGACTATCAAAAATTCTCATGATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACAGAAGCAGAAAAACTGAAATCATATTCCATGCCCATTGGCATTGAATTTCAACGGAGATATGCAACGATCGTTTTAGAGCTTGAACAACTGAACAAGGACCTAAACAAAGTCTTGCACAAAGTTCAGCAGTACTGCTATGAGCTTGCTCCAGACCAAGGGCTCCAGCCTGCAGATCAGCCGACAGACATGAGACGAAGGTGTGAGGAAGAAGCACAGGAAATAGTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGTGTTGAAAATGAAAATCTGACAGACTTAATCTCCAGGCTTACAGCTATTTTATTACAAATTAAGTGTCTAGCAGAAGGAGGCGACCTGAATTCCTTTGAATTTAAATCACTTACAGATTCACTAAATGATATCAAGAGTACAATAGATGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAAATTCATGTTGCACATATTCAGAGCGGCCTGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAGAGACTGAATAGAAGATTTAATTATCCCAACTGCATAGGACATTGTTTTTGTGAAGTTCTCTTCCTTTATATAGGCTTCCAACACCAAATAACCTATCTGCTGGAAAACAAGGAAAATTTAAATCTCCAAATAAGGCATTTTAATATACTCTACTGCTTCTTGAACCAGCATTGCTGACCAGCATTATATTTATTTTTCTTTTATTACTCAGCTGCAGTAGCACTGCTTATGTTATATATGTTTATTAGCAAGTATTTTTAAACTGAAAATGTCTGAACATAACATAATTTCATGGAAGAATATTGTTGACCATTTTTTTAATGTGCATGAATTCAACTCAACCCAGGCAGACAACTACTGCAGTGGAGAACATGAAGAAACATGGTCTTTTGTGCATTATGCATGGCAATGTGGAAATTCTATCTAGAAAATTACAACTCCAGTTCATTTAGTTGATCACCACTTCAGTCTTCAAAAGATAACATCATGAGATATGGGAAGTCCTCATTTTTAGGAAGCCACTGGAATATAGGTGGGAAATACGGACTTTACAAGTATATATGATATATACTTGCAATGTGACATGGTTCTATAGATCATTTTATAATAATAAATATTTTAATTTATCATAATTTATAAAAGAAACCTTTGTTGTTTGTCTGTTGAAAGAAAATGAAGGAGCAGGAAAGAAACATTACTGCAAGATGCTAAATTTCAGCAAATGGATTTGGCATGTCTTTTCCCATCAATTCAGGGCAAAAAGTGCCATTGTTATGGGATTTATTTTCAAAAGACTGATAACACACTATTTTCATATTTTTTTGTTTATTTGCACAATTTTTGAACCAGATTACTGGTTAAAATCCAACAGTTACACAATTTTTAAAGTAAAAAAAATTTTATAAGGAATACAAATACAATAGCCAGTGCTAGAAAATGGAGAAAAAAGGTTTGTATTTGGTTGTGGGCTTTTTTGGTTCTCGGTTTTTTAAGGAAAACCCTGCCTAAGATGTTAATCTTGTAAAAAGTGTGTATTTGGAATTTTCTCTGTTTTAATATAGAATATTATAAAGTCAAAATATAATAAATTGTTTTCAGATTTGGAGTTTAAGATATAGCTGTAGAAGTGGCTTTGATTCTTTTAGATGTCTCATAAAATGAGACTTTTTATATTAATGTATAATAAAACTGAAACAAGATTATTTTCCATTTGAAATTTTTGTACAGTTTAAAAATGCTTCCATATTCTTTGTTGGTATTGTGCCACTGCAGAACTTTAGTGCAGAGTTTATATTTAGCTAAACTGTTATGTTTAATTAAGAAATGCATAAATCTTTTATTCTTAATATTTGTAATTCTAAATAAATTGATTTATGAAAA EMBV3_36808 GGAAGCACTCTTTCTGGCTGTGACATTGAACTTGTTGGAGCAGGGTACAGATTTTCACTC Gene GeneID:100139116|SGIP1:XM_002686324:100_cdna UTR3_Alt 3 NULL GeneID:100139116 3 GENE SGIP1 NULL SH3-domain GRB2-like (endophilin) interacting protein 1 EMBV3_34036 CCCACTGCTTTTGAATCCGAGTGGACACAGGACCAGCAGCCCAGTGTTGAGCAACCTCAA Variant GeneID:787709|LOC787709:XM_002699494:51_cdna 128^205 1 EMBV3_08822 GeneID:787709 X GENE LOC787709 NULL similar to P antigen family, member 3 (prostate associated) EMBV3_21620 CACTGTGTGCTAATATTGTGACTTTGACGTGGCATGACCTTTGCTGATGTGACTGCATGG Gene BVV0101_046811 + 0 NULL GK000015.2:57288726-57326725 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05891 CATCCAGTGGTAGCACAAAGGGGGACTAACTTATCCTACCAGAATAGGAGGAAGATTAGG Gene BVT0102_079904 + 0 NULL GK000029.2:18208409-18250500 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29938 ACCAAGAGGATGCTGAATGCACTCTGTCCTCACAAGCCCTCAGCTAAGCAGGTTTCCAGT Gene GeneID:281247|IL13:NM_174089:22_cdna Constitutive 0 NULL GeneID:281247 7 GENE IL13 NULL interleukin 13 EMBV3_20406 CAGAGTTGTCAAGCCAGCAGAGGATCTTGGTTCAAAGGCCAGAGAAAAGACAGATAATTA Gene BVT0102_405349 + 1 EMBV3_33110 GK000030.2:25010008-25235057 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246603 1 XLOC_151041 NonCoding TCONS_00246603 XLOC_151041 NonCoding NonCoding LOC100848707 X:25170607-25174785 = TSS184847 530 1 TCONS_00246603_1 95 3 0.873832894421834 0 0 0 0 0 0 0 0 0 0.000558950367041794 8.63844784093505e-06 0 0 0 0 0.00249165772386778 0 0.00241440847915627 0 0 0 0.000882079416044425 0.000155785848767479 0.000885678518193449 0 0 0 0.000126861374445252 1.83192896728138e-05 0.000805413909673486 XR_240752.1 LOC100848707 PREDICTED: Bos taurus uncharacterized LOC100848707 (LOC100848707), 0.0 957 100.00 0.99811320754717 XR_244544.1 LOC101928833 PREDICTED: Homo sapiens uncharacterized LOC101928833 (LOC101928833), misc_RNA. 4e-09 66.2 70.32 0.283018867924528 0 noncoding 0 0 0 0 -0.0589235886803613 0.640039270696315 0.0336485934592902 0.491125285271114 ATACCATTATGATGATTTGAGTGACTTCATATTACTGGCTTCTCTTCAGAGTTGTCAAGCCAGCAGAGGATCTTGGTTCAAAGGCCAGAGAAAAGACAGATAATTAGACTTAACTCTCCCTTTTCTTCATATAACGAAAGAGTTAAAATATTTAGATAATGAACAAAGTTGCAATGTTCTTTCTTCTTTTCATTTTTGTATTTTTAATGGAAAGTCCACTTCATTTGAACATGATTTATTCAGCACCCATAAAATTGGATCAGTCATTGGCCAAACCAAATGAAAACAATAGCGGTCATCAACAGAGCGGATTTCCATCAAAGTACTCAGCCATGATGAGAAATGAGACTGTTGTTCTACAGAGAAAAATCTGGAAAGATTCTGATGTAGCCTATGCTATACCTAAACGATACATCAAATGGGATATAAGGAATATGGCCTTATAAAATTCACAAATAGCCCTCTAATCAAATCCCTCTGAGATGGTACCACACAAATCAAAACAATAAATGCATCATTTAATTAGCAAA EMBV3_15450 GTGCTTTCAGGGATGTTAGATTTGGGAAGAGACACTGGTGCAATAGAGGTAGTGGTAACC Gene GeneID:282005|PROCR:NM_174437:736_cdna Constitutive 0 NULL GeneID:282005 13 GENE PROCR EPCR protein C receptor, endothelial (EPCR) EMBV3_10192 GGCTGAAGGTCAGCTTGCTATGTCTGACCAGATGGTGAGGCTCAATAACCCTAAAGAATG Gene GeneID:532672|STAMBP:NM_001075971:8_cdna Constitutive 0 NULL GeneID:532672 11 GENE STAMBP MGC139529 STAM binding protein EMBV3_08466 ACGCCCCAAGTGCGTCGTCACCGCCATGCCTAAGAATAAAGGTAAAGAAGGTAAAAACAG Gene GeneID:613487|LOC613487:XM_002686406:278_cdna Constitutive 0 NULL GeneID:613487 3 GENE LOC613487 NULL similar to Eukaryotic translation initiation factor 1A, X-chromosomal (eIF-1A X isoform) (eIF-4C) EMBV3_03864 GCTTTCAGAGCGTTCCTGTCCTTCCGCGGCCTTCATAAGGACTGCTACTCAGCCGGCGAA Gene GeneID:100298143|LOC100298143:XM_002685806:2_cdna Constitutive 0 NULL GeneID:100298143 2 GENE LOC100298143 NULL hypothetical protein LOC100298143 EMBV3_18210 CTCCTGGGTGGTTTTGAACTGCCCTCATTTTCTCAGTGGCCATTTATTGCGTCCCTCAGG Gene GeneID:518849|SLC17A7:NM_001098046:247_cdna Constitutive 0 NULL GeneID:518849 18 GENE SLC17A7 NULL solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 EMBV3_10800 CATCGACACTTCTTTATAACTTCAAAATCTAGCTCAGGCACCCCTGGTTTGGAATTGTTC Gene GeneID:537487|IGSF10:XM_002685003:123_cdna UTR3_Alt 2 NULL GeneID:537487 1 GENE IGSF10 NULL immunoglobulin superfamily, member 10 EMBV3_12716 AACTCCTGTGGTGTGCTCACGGCTGGGCATGCTTTGCTGGTCCCCATGTTCCTTGACTTT Gene BVV0101_014775 + 0 NULL GK000017.2:65596949-65602268 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075976 TCONS_00075969 TCONS_00075975 TCONS_00075974 TCONS_00075966 TCONS_00075967 TCONS_00075973 TCONS_00075978 TCONS_00075970 TCONS_00075968 TCONS_00075971 1 XLOC_046698 Coding TCONS_00075969 XLOC_046698 Coding Coding GIT2 17:65556386-65599935 j TSS57139 6219 1 TCONS_00075969_3 729 0.0430937449750764 19 0.857628364103977 5.98315788443571e-06 0.000652079606579796 0.00265267676926861 0.00282267254267452 7.46892546893961e-06 2.12471800024231e-24 0.00153426916254534 7.79208391901714e-05 0.00374349469719711 0.000331649186729103 0.000264868452486664 4.39093207121788e-29 0.000168984201450388 0.0014389385453825 0.000427612920444716 0.000805210726156123 2.92442710959052e-18 1.08773874833093e-15 0.00122865046972066 0.00135370867501702 1.34201478878409e-19 0.000623901792972981 1.95940178906051e-05 3.93806283124211e-11 0.00481409510715687 0.00614825693462279 0.00235737159831884 0.000221426029474382 0.000132674846011767 9.051467970819e-08 XM_005217835.1 GIT2 PREDICTED: Bos taurus G protein-coupled receptor kinase interacting ArfGAP 2 (GIT2), transcript variant X3, mRNA. 0.0 9647 100.00 0.859945328831002 NM_001135214.1 GIT2 Homo sapiens G protein-coupled receptor kinase interacting ArfGAP 2 (GIT2), transcript variant 5, mRNA. 0.0 3752 88.60 0.464383341373211 TCONS_00075969_3 sp|Q14161|GIT2_HUMAN GIT2_HUMAN ARF GTPase-activating protein GIT2; 0.0 1444 92.23 0.998628257887517 7 coding 0 0 1 1 -0.0474826307595807 0.702308312800641 -0.00243531621715029 0.969592779248156 GCTGCGCCGCGGCTGTGAGGTGCTGAGGGGAGAGGCGGCCGCCGCCAGCGCCGCTGCGGGGACCCGTTAGAGCGGAAGCGCAGCCGCCGCCGCCGCCTTCACTGTCCCGGGGCCCCAGGTTCCCGGCAGGTGGGAGGCGGGAGCCATGTCGAAGCGGCTCCGGAGCAGCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTTCCTGGGCATCCGTAAATAGGGGAACGTTTATATGCGATGAGTGCTGCAGTGTCCATCGGAGTCTGGGACGCCATATCTCTCAAGTGAGGCATCTTAAACACACACCATGGCCTCCGACATTGCTTCAGATGGTTGAAACCTTGTATAATAATGGTGCTAATTCTATATGGGAGCATTCGTTACTGGACCCCACCTCTATTATGAGTGGAAGACGCAAAGCTAATCCACAGGATAAAGTACATCCTAATAAAGCAGAATTCATCAGAGCCAAGTATCAGATGTTAGCGTTCGTCCACCGCTTGCCCTGCCGGGATGACGACAGTGTGACCGCCAAAGATCTCAGTAAGCAACTCCATTCAAGCGTGAGAACAGGGAATCTTGAAACCTGTTTGAGGCTGTTATCTTTAGGAGCACAAGCCAACTTTTTTCACCCTGAGAAAGGAAACACCCCCCTCCATGTGGCCTCCAAAGCAGGGCAGATTCTACAGGCAGAATTGTTGGCAGTATACGGAGCAGACCCAGGCACCCAGGACTCCAGTGGGAAAACTCCTGTCGACTATGCCAGGCAAGGAGGGCACCACGAGCTGGCAGAGCGCCTTGTAGAAATACAGTACGAGCTGACTGACAGACTAGCCTTCTATCTCTGCGGCAGGAAACCAGATCACAAAAATGGACAGCACTTTATAATACCTCAAATGGCGGACAGCAGCCTGGATTTGTCTGAATTGGCAAAAGCTGCTAAGAAGAAACTTCAGTCTCTAAGTAATCATTTGTTTGAAGAACTTGCCATGGATGTGTACGATGAAGTTGACAGGCGAGAGACTGATGCAGTCTGGCTTGCCACGCAGAACCACAGCACCCTGGTGACCGAGACAACCGTCGTCCCCTTCCTTCCAGTCAATCCCGAGTACTCATCGACACGGAACCAGGGCAGACAGAAACTAGCTCGGTTTAACGCCCATGAGTTTGCCACTCTGGTTATCGACATTCTCAGTGATGCCAAGAGGAGACAGCAAGGCAGCCCTCTCTCTAGTTCAAAAGACAATGTGGAACTGATACTGAAAACAATTAGTAACCAGCACAGTGTTGAGAGTCAGGACAATGACCAGCCAGACTACGACAGTGTGGCGTCAGACGAAGACACGGATCCGGAAGCCACTGCAAGCAAGGCCCACAGGCAAAAGAGCCTAGATTCAGATTTATCAGATGGACCAGTCACTGTGCAGGAATTTTTGGAGGTCAAAAACGCTCTAGTGGCTTCTGAGGCCAAGATACAACAGCTAATGAAGGTGAATAACAACTTGAGTGACGAGCTGAGAATTATGCAGAAAAAGCTTCAAACACTCCAGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAACCAATATATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCTTCCTTAAAGCGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGACAGGATCGGGTCAGAAACCCTATCTCCCAATGGGAGAAGTGAACCATCCCGAAGAGAGCAGGACGAGACTCCAGCCTTTCCCGGCGCACGCATCCCGGCTGGAGAAGCAGAATAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACAGGGACCTGGATGACATGGGGTCAAGCAGGAAAGGAAGGCAGAGGAGCTCGGTGTGGCAGAGTGACAGCTCAGGCCCAGACACGGCAGAGCCCCATGTGGCCCCTAGCCCCATCCTCCCCAGCACCGAAGACGTCATCCGGAAGACAGAGCAGATCACCAAAAACATACAGGAGCTCCTAAGGGCAGCCCAAGAAAATAAACATGACAGTTATATTCCCTGCTCAGAGAGGATACATGTGGCTGTTACAGAAATGGCAGCGTTATTCCCCAAAAAACCCAAGTCCGACATGGTGAGGACCTCCCTCCGCTTACTGACGTCCAGTGCCTACCGACTGCAGTCAGAATGCAAGAAGACCCTCCCGGGGGACCCGGGCCCGCCCACGGACATCCAGCTGGTCACGCAGCAGGTCATCCAGTGTGCCTACGACATCGCCAAGGCCGCCAAGCAGCTGGTCACCATCACCACCAAAGAGAACAACAACTGAACGGCAGGGCTGGCCCTTCTGTTTTCTAAGCTTTTCCAAGTCCGGTTTCCACTTTAGACATGGAACTCTTGGCGATTTTTGCAGACACAAACATTTAATGAAAGTTTAAAACTTTTTAAAAAGAAAACTCAGTATTATTTTTGCATGTTTTCTAACAAATTTTCAACTATTAATTTAACCCACTTGCCTTATTTTGTGCCTGTCTGCCAGTTTACCTTCTGACGTTCTGTTGTGCTGTCCGTGACCGTCGAGTTAACGATCATAGACACCCGAAAGCAGAGCTTTGTTGTTTAAAGTTTGTTAGGCCTTCTCCATCCCTTCAGACTCCTTGCCTGTGGCTAAAACTATAAGTGAGGTTCTTAGTGAAACATTCTCTGGAGAGAGTTGTCTGATCCCTGTCAAGCATTGTGCAATAAGCAAGTTTTCCAGGCTCTACTGCAGAACCTCTTTAAGTTTGGGGTATCTCCAAGCAGGCGTGTAGAGAAAGGACTTTGCCGCTTTCTAAAACTAGCGTAGCAGTCTCTCTCGGGAGGGAACAATGAAGTGCTCCGTTTACCCGTCCTGCCACACTCGGTGTTCTCTCAGCTAATTTTTCTGTCTTGTCTTCTGTCCGTTTCTGTTTTACTGTCACCCCTAAGTCCGCATAGCGATAAGCACTCGCCCTCCGTGTCCTGTGTGCCTTGGCCACGTTGTCACGCACAGGCTGAGGACCCCCAGCCCCACGAGCCATAGCTAATTTCGTCCCACCCTTCAGATAGCACTGCCGTAAACTGTGACGAGAGAAATGGCCTACTCCCCTCACTCCTTTAGCCGCTTAAAGCCTTCTCACACGACCAGCCCCGCACGTCTCACCACCTTTAAGGACTTCAGGTAAGGTAAGATGCGTACAGTCACCGGGATTCGCTTCTCCTCTGGCGCCTCCTCGCTGGTACTTCAGCATCAGACATCACATTTCAGGAATTCCCTGCAGAGCGCTCTAGGTGACCGTGCGCTATCCCAAGGCTACAAAAGCCTGCAGGTGTAAGGTCTGGGATGCCCTGAGGTTGCCTTCTAAGAAGAGCTGGGTCGTTCTGGAAGCTTAAAGTGTATTCCTTCCTGCTCGTGGCCACTGTTTTGTGTGGGCGTGGCTCAGACCCTGACCTCAACCAGCGGGGCCAGGCAGTAGTGACAATGAATGAAGCGAGCCAGGTGCCAGGGAGGGACAGCAAGGAGCCCACGGCATGTCAGTGGGGACAGCAGCTGCCCAGCTCCACTCAGGCTGCCGTGTAAATAAAACGGGCCTGGAGTTGCTGAAGCTTTTGACTTGTCAGAAGACATCAGATGTTTCTGTGCCATCTCTCCATCTGTAATCGTCGGTGACTCGTCTAAACGTGTTCACAGCACGCGTGTGGGCACGCTGCGGCCTGGAGGCTGCTGGTTCCCGGCTCTGCTGTGGATTGCGAGGCCTGGCTTCCCTGGCCTCCCGGGGTTTAGCCTCTGAGCCTTATCACCTTTTGTGGGGCTGCCGCACCCTCTGTTAAAGTTGCTGTTGGTCCTTGTTTCGCCATCTGTTCTGTCCCGTAGCGCTCGTTCACACACATGGAAAAGTCAAAATCATCACAGTTGCCCCAAAACATGCTCGGTAAGCCTGTATTTTCACAGAACTGTTTGAATCACAAACACCTTTGTAGCCTGACTGAATGCTGTCAGAAGGAGTACGGTGATGGTATTTGGTTACTAAGTCACTGTGCTGGGTGCTTTCGCCGGCTTTTGCTCTGCTGAGTAGTGCGGGGAAAGGGTCCACGTCTCCAAGATTTGTCTGCACAAACCTAAGTGCCACGCTCTTGTCAGATGCTGAGGGGCGTCTTCTCAAAGGAGGTCTTCTACCTCCACTTCAGGCACCGTCTGAGAACCATCTCTGCACGCTGCACGGACAGGCTGTCCCTCTTCTTCCTGGCGAGCACCTGCTCTTCTTCCCGGCCAACACCTGCTCTTCTTCCCGGCCAACACAGGCTCCTTGGGCAAGGCCCGGCGCAGCCTTGGGTCGGTGCCCTTGGCCGCCTCTGTCGGGAGGACAGCCTTCTGGATGATGAGTTGCTGCAGTGGGTAAAGCAGCGTCTTCACGGGCACACTCAGGACCTGGAGTGGGGGATGTCATTTTGTGCCCCTGGAGAAAGTCAAGGAACATGGGGACCAGCAAAGCATGCCCAGCCGTGAGCACACCACAGGAGTTCGCCCTGCTGACCCACAGTGCCAGCACTTGGGAAGGGATGCTCCCGGGAAGGGATGCTCCCAGGTGGAGTGACACCCAGCGACAGGAGGGCTGAGGGGGACCCTTCTCCTCCAGCCCGCTGCGTGTTTCCTTGAGGCCAGGGTCGGAGACCCACAGGGCCCGTGGACAGTCTCACCTCGTCTCAGCAGCCGTTCACCACCTTTTGCACAGGGGTTCCCGGGCCTTACACTGACGTCTGAGCTCTGTCATGTCATCCTCTTCCCCTTGATTCTCAAATCCCTGCCCCCTCAGATGCCCTAAGGAGCTGGGAGGACACAGGTAGGAAAGCGACCGGGAGGCAGCTCCACCTGAGCGCCTCCCGCTGAAGTCCTCCTCTGCTTCGGAACACAAATAGTTCTTATTTGCCAAAGAACAACGACTCGGACCCAAAGACTAAACACAGCATTTCACGGATGGGAACTGGAAACGCACAACTCAGGAGCTGTCCTCCGACTCCCCCAGTGATTTCAGCTGCAGAACCCGAGCGAGCCCAGCTCGGGTCTTTCCCCCACAGCCGCCCTGAGCTCCCCATGCAGAGGGTCTTCCTTCTTTCCTTGTCCTGGTTGAAGGTCACCTTGATTTTCCAAAAGAAAATGCTGCATAGGAAAAATGAAATGCCTTTTATCCCAGTGTCTTCTATCCATGTCACCCATGATTCTGTACTTATTTTTCCTGTTCGTTGTACATTTGTATCCCTGTAATTATTGTTCAACCCTGTAAGCGTTGTAAAATCGTTTTGGAATTTGTGCCTGCTAGTTATGCAATAAACAGGCTATGTAAGTGTCCTTGGGGTACCGTGTCTGCCATCAATTAGCTGATGTTTCCAGATACTCGGTCAAAGTTCTGAGGAAGTTGTCCCCGTGGAAACCCGTCTTCCGTGGGAGGCAGTACTGCAGGTGCTTCCACCCTGGGAGCTCTGTCGATGGCCTTGTCCTCCTCTGTTCTCAGCAGACAGCTTTCTTACAAGAGGTACTGCATCATGGGGTCATTTCCAGGTATCTGATAGTGAGGCCTTTACTCCTCACGTTAGATTTTTAAAATTCAGCGAAAGCCAGCCAAGCACAGGTGCCGTCACCTCTCCTGAGTGAGTAACCGGGGCACAGTCTTCTTTTGCCAAGAAGTTGTGTCTTACCCTTGAGCCCCAGGTGCCAGGACTCCCGCAGCGTCTATGAAATAACCGACTGAAAGGACTGTCCACTGGCTCCCAAGCACCATGGGCAGTGCTCTGCCAGCCATGGGGCTACACAGAGGCCACTGGCCTCACCACAGGGACAGGTCGGGGGCCATCTGCGGGTGACGCGCCGAGAGGCTGTCCAGGAGCTGTCTCCGTGGCCAGAGCCATCGAGATGGCACGGACTCCACAGCTTTCTGGGGTCATGTGGCAGCTCACCACACAGCAGCTCCCTGGCGGAGGGGGCGCTGCGGACAAGGGGAGGTCTGGGGAAGCTGGGCTTCATCCTCCCGCCCCCGCTCCTAGGCCCTTACTCACAAGCAGTTTTCCTGACCACACTCCCCAGAATTCTCAGCCCATCTCCCACCCCAGTGCAGCTGCTCCCCGAAACTCCTCTTCCCCCCTCACCCCTTCCCACACCTTCCCTTCTTGGGATTCGTCTTCCCCCTTCTGTCTGTCCCC EMBV3_15442 CCCAACCCAGGTCCTCCCACATTGCAGGCAGATTCTTTACCATCTAAGCTATATGTGATA Gene BVT0102_228633 + 0 NULL GK000019.2:50134718-50243526 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21231 GCCGTGAAGAAACTAGCCTTGGAAGACCCAGGTTCGAATCCCGACTCTCGAAACTTCTTT Gene GeneID:100335675|LOC100335675:XM_002688458:4_cdna Constitutive 0 NULL GeneID:100335675 6 GENE LOC100335675 NULL hypothetical protein LOC100335675 EMBV3_32228 GACCCCAAGTACCCGCAGCAGTGGCACCTGAGCCCTGAGGGCAGCTATGACCTCAACTCT Variant GeneID:515398|PCSK7:XM_002692999:178_cdna 604^738 1 EMBV3_08368 GeneID:515398 15 GENE PCSK7 NULL proprotein convertase subtilisin/kexin type 7 EMBV3_23054 GTGTCTACCTTGCTCTTGAGGTGGATGAACTTGAGAAGCTTGAGTGTGTAAGCCATGCAC Gene BVT0101_014749 + 0 NULL GK000004.2:77366799-77389292 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182118 1 XLOC_110769 Coding TCONS_00182118 XLOC_110769 Coding Coding PURB 4:77365870-77371708 o TSS136162 5838 1 TCONS_00182118_2 304 1 0 4.95370536887717e-11 2.66560584373473e-11 3.07553973750062e-11 2.30645501937803e-11 0 9.32637245110477e-12 1.27791189927493e-11 1.64258825978829e-11 9.40809935483408e-05 4.17478200962269e-05 4.96136176332758e-05 0.000189173132359259 1.00720983346625e-11 9.52818030550856e-05 4.53492923810082e-05 0.00212837645964181 0.000535305602469301 0.000391304764324194 2.78580039493669e-11 2.75565734862619e-11 6.9363361408259e-12 0.00101863123886295 0.000568346953189589 0.000282076645592067 2.46568410433089e-11 2.31961721896265e-11 1.27441641592552e-05 0.000153324185082824 2.99675457877403e-05 0.000100468255377575 NM_001206632.1 PURB Bos taurus purine-rich element binding protein B (PURB), mRNA. 0.0 5633 100.00 0.534772182254197 NM_033224.4 PURB Homo sapiens purine-rich element binding protein B (PURB), mRNA. 0.0 7066 86.73 0.998800959232614 TCONS_00182118_2 sp|Q96QR8|PURB_HUMAN PURB_HUMAN Transcriptional activator protein Pur-beta; 8e-170 478 95.68 0.898026315789474 2 coding 0 0 0 0 -0.0298101484153022 0.78384562278962 -0.0339781124127728 0.584543151666954 GGCGGCCGAGAAGATGGCGGACGGCGACAGCGGCAGCGAGCGCGGCGGTGGCGGGCCCGGCGGCTTCCAGCCCGCGTCCCGCGGCGGCGGCGAGCAGGAGACGCAGGAGCTGGCCTCGAAGCGGCTGGACATCCAAAACAAACGGTTCTACCTAGATGTGAAGCAGAACGCCAAAGGCCGCTTTCTCAAGATCGCCGAAGTGGGCGCGGGCGGCTCCAAGAGCCGCCTTACGCTGTCCATGGCGGTGGCCGCCGAGTTCCGTGACTACCTGGGCGACTTCATCGAGCATTACGCGCAGCTGGGCCCCAGCAGCCCGGAGCAAGTGGCAGCGGCGGCGGGCGCCGAGGAGGGCGGTGGGCCGCGGCGCGCGCTCAAGAGCGAGTTCCTGGTACGCGAGAACCGCAAGTACTACCTGGACCTCAAGGAAAACCAGCGCGGCCGCTTCCTGCGCATCCGCCAGACGGTCAACCGCGGCGGCGGTGGCCCGGGACCCGGCGGCCTGCAGAGCGGCCAGACCATTGCGCTGCCCGCGCAGGGCCTCATAGAGTTCCGCGACGCGTTGGCCAAGCTCATCGACGACTACGGCGGCGAGGATGACGAGCTGGCGGGGGGCCCGGGCGGCGGCGCCGGAGGCCCTGGGGGCGGCCTGTACGGGGAGCTCCCAGAAGGCACTTCCATCACGGTGGACTCCAAGCGTTTCTTCTTCGACGTGGGCTGTAACAAGTACGGAGTGTTCCTGCGCGTGAGCGAGGTGAAGCCGTCCTACCGCAACGCCATCACGGTCCCTTTCAAGGCCTGGGGCAAGTTCGGGGGCGCGTTTTGCCGATATGCGGATGAGATGAAAGAGATCCAGGAGCGGCAGAGGGATAAGCTTTATGAGCGACGCGGCGGGGACGAGTCAGAGGGAGAGGAGGTGGATGAGGATTGAAACTCGCGGCTTCCTCCCTTACGGGCCTCCCCACCCCACCACCGTCTCCTTGGCTAGAGAACTCCCCTTCCTGTTCATCCCCAGTGAGCTAGTGGAGGGGAAGCAAGGGAGGCCCCGGAGGGGGAAAACAAAATTTTAAATAATATAGTTAATTAAGAGAAATAACCGTAAGAAAACAGTCAGGACAATTAGAGAAAAGCAGTAAAGTTCCAAGGAATTGACAGTAATCTGCAAAGAGAGGACAACAGCGTCTCCTCACCTGAGCAGAAGTCTCAGCTTCTCTTCCTTCCCAGCTAAGGTTCCTAAATCCATCAGGATAACCCTGGATGGGATAGATCCTTGCACGCTGGCCAAGGAACACCTCATCAGTTACCCAGACCCGTTGATGACAGCTCAATTTGTGTTATATTTGGGTAACTTGATCTAAAGATCTTTCTAGACCTCATTGTTGCAGTGTCTATCCCTTCACCTCCATTGAAATCAGCGTTTTGGATCTAGATCTTCATGGAATTCTTGTGAAGAGAGAGGCCTTTGCAGTTACCCAGTCCTGAGGGTACAAGTTTCATGAAAAGGAATGCAACTTTACATAATCATAGACAGGGCAAAATAAGAATTGAAGAAGCCACCAGGGACAGAAACAAATTGGATCCATTTTTAAATGGTTTTGCATAGAACCTGGACCAAGGCCCGTGTCTTGTCTTTGCAGAATTATTTTCCGGGATGCAAATGGATTCAGATGTCAATCCTTGAACTAGAATCCCTTACTATAATGTTTTGGAAGTTGGCAGATTTTTTTCAAAGATAAAAGCAGTTTTACATTGGGGGTTGCTGAGGTAGGCACAATAAGAAATCAGGCATAAAGCACAAGGAAAACTGTTTGAGTGGATTGGTTGCTGCTCACTAAAGTTCTTCCCCGATCTCCAAATATGGAGGTCATGGCTTAGATATGAATGAGAGCCAGATACCCGTGGCTCCACCGTGTGAGCCAGTGAATTATGGCTAATTCGGCTGTTTCGGCCACTGGTTGGCTGGATTTTAAACCATAAAACTTGGACATCTTTACAAAAGGAACATTGTGGCTACAAGCCTGAGCTTTAATGGAATATAAGTCCACACAGAAAAGTTGGAAGTAACCAAAACTGAAGTCATCTACCTTCAGTTTAATCTGTGGATTTGTTCAAATACTAAGATCCTCAGGTCCAGAATTCCAGCATCATTTATTCTTTTAAAATAAATTTTTAAGAACTTGGTCCATTGTATCAGTACCTCACAATCAAAGTTGGCAAATGATGGATGAGTGATTCAAGCAGCGTGCCCTTTGAAGCTGAAATCCATTTGAATGGAGCTGAAATGAACGTGAATATGCTGACTATATCCTGGAAGCATTTTTATACCATCTTGAAATTTCAACAAACTGGCTTTTGCCAGTTTATCCAGCTGTCTTTCAAGAATAAAAGTTGGGGTTTTCAAGGATCGCCTCTTCTATATTTTAAATGGATTTTCAGTATGATTTTTACTAATCAAGTTAATCCCACCCCATCAAAAGGTATTCCTAGAAGTGTCATAGACCTAGGTAACTTTGAATTGAATGGGAGCTAATGGTCTTTCCAAAGTTTTCAGGTATACTTTGTGCGACACCTTCTCAACAAGGAGGCAAGTAACCCCACCTCCACAATCTTAGTTTCGTTTTTTTTTTAAACTGCATGCCTGCCCTTTATTTGAGCTGCCTTTTAATTTATTGCATACCTTTTTATTATCTTATTTTGGTATTATTCAACCTACAATCTTTTTGTATTTATTGGGAAATAAGTAATATACAAAAAGGTCGTTTTCATGAATTGTGGCTGAGAGGGAGGGAATAATTGTGTATATAAAATTAGGCTTTTTTAAAAAATTAGGTTTGATTCAGAATATCATTGATCTTAGATTTTTTTGTTTTTGTTTTTAAAAAGTGGGAGAGCCACAAATATTGGTGCCCTTTTCAGACTATTTCTCTACTCATCATCCACAGTAGACTTTTTAAACAGATTTTTTTTAAGCTTTTCTTTTTTAAAAAACAACTTTCTCCGTTGCAAAGAATGTTTCCTAAATTGTATGGGAGCAATAGTATTTTTGATGTTTTAATGACATCTGTATACTTGTACTGTATTTTGTACTACAAGGCAGCTGTTTTCAATAATGTCCTGCTGTATTTACCTATGTGTTTTGAGTGTTTATTTCTTTGCTGCGGAGAACAAATCCCTAAATAGTTTTAGTAAAGGGGCTGAGAAGATAGCATTATTAGGTTTGCATAAACTGTTTATAAGTTTCAAACTCTGAGGCAGCAATGGAGATTAAAGTTGCAGCTCTTAGTTGATTGCTGTAACTTTTTCATTTTCAAAACATGTATAATTCCTGTATAGACCAACTTGTTTTCCTGCTTCAGTGGTGGTTCTGTTGCTCAGCTGCAGTGAGCCAGTTCAATTTTGCAAAGGTGCAGTACCTCTCCTTTTTAAGGGGTTGGTTTATTCTTTTTTCTTTTCTTTTTGTTTGGCTGAATTGCAGCAACTAGCCTTGCCTTTCTACTCTGTAGAAATGACAGGGTCTTCACAATCCTTCACCAGTGGCTACTAAGCTATAATTAGCTGAATAGAAAGAATGTGGAAGTGGTCTGAGGCATATAGAGTATATGCCAAGAACACTACCATATATGGCATCAGCTTTGGTTACCAGAGAAATTTTCTTAGTCATTAGACCATATAACAGTAATATATCATATGTAAATCTTTAGATATCAATTTGAGAATCCTCCAAAAAAAGGAGCAAAGAATGCATAAGCTATGTGTTGGAAAAAGTAATTTATATTAAAATTTTGACCTGCCTATGTAAGATTAAATGGTAAATGTCATAGTGGTGGGTTTTTAAGTCTTAACCAATCTCAAAGGTTTGTTTCTCCTGCAGGGGGTGGTTCATGGCCTCTCTTCTCACTGCAGGAAGATTACAGGAGGATGTGGATTAATTGTAGCATTCACTGATCCTCATTCAGTACTAGGGACAATAGAAATCTGCAAAGCACAGACTACACTTTCAGTGTGTGGTTTGTTAAACAAAGTGATATTAACAGGCTGGCTTTCAGAACTCATTCATAAATACTGCCTATTAAAGGAAATGATCTTTGTTAATTCCAGTCAGAAAATAGCATTATACAGACTATGGGAAAGCAATTTTGTGTTTTGTCTTTCAGCCGCTACTATGAACAGTGATTTAGGACTGTTTTTCAACTTTGGCAAACATCCCAGCTAATCATGTGTTCAAAACAGTCATATTCCGGAGAAGTGGGAAACTAAAATTCTTTTTTGGAGAATTGGTAGAATGTCTGTTTCTCAAACTGCTGCAGACATGAGAAATTTTAAGAACAAAATCGAAGGATCAAAAATTTGTGATGAGATACTACTCTTGCCTTCTGGTTTCTATTGTCCCTACCTTTCATTCAAGTAGAATGGCAGTTCTAGTCAGCGGAGAAAGTTTCCAGTGCATATGCTGCACAGGACACAGTGTAAATCTATATGGCACCAAAAATCAAAGTGAAAACCAAACCAAAAACCCAGACACCCTATGTTACTACGGGAGGCATGTAGGTGGTATAAATGACTGTAGCTGTGATACACACATGGCTACTTGTCAAGTCACTTTCCATAATTATTTACTGCAAAATGATTGAGGCTTTGGTGCAGGCAGGCTGTTAACGCTTCCCTGTTACCTCTCTATCACTTTGCAATAAATTGCAGGTCTTTTAAGAGATTCAAGCTTCAGTTTTCTCAAAAAACAAAACAATTATCCTGGCTTATCTGAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTGAGTGGTCTGTAAATGGCTGCACACTTCAGGCACTATAGTTGCTGAGAATGCTTTGTTAAATGTGACCTTGACTGGCTTTACAGGGGGTAGAATATGCTCTCCACAAGGTATTAAAAGGTAACTACCCATTTGTGTCTACCTTGCTCTTGAGGTGGATGAACTTGAGAAGCTTGAGTGTGTAAGCCATGCACATAGGTATTCTTCACTGTAAATTTTGTTTTCATTTTTAACCCAGTTATGGTACTTTGTCCAATGCACAGCTGATCTCTCAGTAGATATTCATTTGAGAATAGTGTGGCCTTGATCTGTGAGAAGGGGAAGGAGAGAAGTGACTTTTTGCTTATGTAAAAATGACTCTTTGTCGAGAGGCATTCTGTAGCACTCTTGGTATCTAATGTGGTCGGTCTCCTTGTTTATTGGGGAAAGTTAATGTTTTTGACCCTGGAGTTATTAATTCAATTGAGTTGTCTTCTATTTTTAGGAAGTATCAGAATTGCTCTGATAAGTAAGAAAGTAGACTGCTTTGATGTACAATCTCAGGTTTTAGAATACATATAGTGGTGTAAAATTCCACTGTTAACTCTTAAAACAATTTTAATTTAGTATACCCTAAAAGTCACCTGCATAAGGCCTGTTCAAAGAGCAGCGCCTCCCATCTTTTTGCTCCTTTTCCATTTCGTACTTCACTTGAGAAAGTGTCAAGTGATTTTTTTCCTTGTATATTTCCATTTTAGCCCTGACATATTTCTCAGATAAAGCACTTTTTGATCATGAAATACATGGAATCTGTGTGTGATGTGGATCATGGTTTCTCAGGCTCCCCTAGATAATTTGCTTTTGAATATTGTTTTAACTCTGTATAAGAAAAGTAGAAATCTTTGCTAATGTTAGAAAGTTTGTATTACTGATCTAGAATGCATTTTGCTAGTTTCCAATGGACGGGAGAGTAAACAATGCTGCATTCACGATTTAATAAGTTACTTTCCCTTGAGCCTTAAGGTAACTTTTTTTTTTCTGTCAATACGGC TCONS_00182117 s 5' 0 TCONS_00182117 s 5' 0 EMBV3_24772 ATAAAACAAGACAAAGGCAGTGCACCAATCCACCTCCTGGAAATGGGGGCAACCCCTGCT Gene GeneID:513217|C8B:NM_001046141:46_cdna Constitutive 0 NULL GeneID:513217 3 GENE C8B MGC137114 complement component 8, beta polypeptide EMBV3_14140 TGCTGTATGGCATCGAAACTTAAGACTTTGGGAAAAGCTTGTGGGCTTGCGTTGAGGGAG Gene BVT0102_186410 - 0 NULL GK000011.2:68255607-68275546 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14878 TGGAGACATTGGCTGGTGTCAGATATCAAGCCTACCATCCTCCCTCCCCACCAGCACACA Variant GeneID:513254|PEBP4:NM_001034440:76_cdna 600^645 2 EMBV3_32156 GeneID:513254 8 GENE PEBP4 MGC127772 phosphatidylethanolamine-binding protein 4 EMBV3_03557 GAGGAGAAAGCCATCTACTTTTCTGAAAAGTGACGTCTGGGAGCAGCGAACTGGAAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41567 TTGGACCAGAAGCTGCTCCCAAGGTGAAGCGCAGGGCACATTCCTGGAAGTTTTCTTTTA Gene GeneID:534964|INTS7:NM_001076044:90_cdna Constitutive 0 NULL GeneID:534964 16 GENE INTS7 MGC138137 integrator complex subunit 7 EMBV3_04698 AACCTGGGCTGGTTCTCAGACCTGGATGGCAAGAGGAATATTGAAGAAATCCTGGCAGCC Gene BVV0102_321376 + 0 NULL GK000011.2:103870356-103876013 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029307 TCONS_00029306 1 XLOC_015710 Coding TCONS_00029307 XLOC_015710 Coding Coding LOC100848156 11:103873422-103875848 = TSS20402 1294 1 TCONS_00029307_1 169 0.108191653786708 3 0.467628865979381 0.000609838609021144 0.00026402281512533 0.000384771907174414 0.000541696489013755 0.000202218503787201 8.56941920800692e-05 9.46411336376929e-05 4.93622504703731e-05 0.000279083877536246 6.67729681142082e-05 1.59216212511525e-05 3.59225209252531e-05 1.15559682354301e-05 3.63511069344964e-06 1.20423758210234e-05 0.00277587041310626 0.00379146812365024 0.00240370302771132 0.00128566985561234 0.00118375238615406 0.000724914976596849 0.000625080404077135 0.000347394468014412 0.00173606050994561 8.03144721355067e-05 5.44469656490066e-05 0.000153949706098091 0.000809091040646453 0.00066028731266737 0.000868848930865159 XM_003582844.2 DNLZ PREDICTED: Bos taurus DNL-type zinc finger (DNLZ), mRNA. 0.0 1184 100.00 0.506182380216383 NM_001080849.2 DNLZ Homo sapiens DNL-type zinc finger (DNLZ), transcript variant 1, 2e-143 513 75.04 0.492272024729521 TCONS_00029307_1 sp|Q5SXM8|DNLZ_HUMAN DNLZ_HUMAN DNL-type zinc finger protein; 2e-82 246 71.91 0.994082840236686 1 coding 0 0 0 0 -0.455566741185972 0.0132081493531471 0.00351380126041233 0.942275455584341 CCGCTGCCCGCTTCCAATATGGCAGCGGGGCGGGGCGGCCGGCGGGCGGCATGCTGCGGGCGGCGTTGAGCCACGTGCCGATACTGTTGAGCTGCGCGCGGCCCCGCGGGCCCAGCCCGAGGTGGCTGTGGGATCGCCGGGCCCGCCTGCAGGCCGCGGGGACAAGGCGGGCCTGGGGGTGGGGCTGGCGGCGCTTGAGCTCCGAGCCGGGACCCGGGCCGGCGCACTACCAGCTTGTCTACACCTGCAAGGTCTGTGGGACCAGGTCCTCGAAGCGCATCTCCAAGCTCGCCTATCACCAGGGTGTGGTCATTGTGACTTGCCCGGGCTGCCAGAACCACCACATCATCGCCGACAACCTGGGCTGGTTCTCAGACCTGGATGGCAAGAGGAATATTGAAGAAATCCTGGCAGCCAGAGGGGAGAAGGTACGCCGAGTGGCTGGCGATGGGGCCCTGGAGCTCCTTTTAGAGGCTGCGGGGCCCCCCAAACCCACCACTGCTGCGGAAGGGGCTGAGGACCAGGATTCCACCCAGCCCAGCAAGACGGAGGCTAGCTGACCCGTCTTCTGCCTTGGAGAAGGGTGCTCCAGCCCTGGGCTACTCTGGACGTGCCTGTTTTCCATCAATAAACAGACTTCACTGCAGAGGCTGGGACCTGGGGCTCTCCTGTCATCCCTGCCTCTGGAGTCAGAGTGAGTCACAAGCACGCTGGAGGCCGCATCTGAGTGGGAGGGCTGGATGTTGCAGTCTGAGCCCTACCCCACCCCCACCCCCAGGGCTGCACTGTGTGACCTTGGGCAGGTCTCTTTGCCTCTCTGAGCCTCTGTCTTCCTATTTTCTGATGAAGATGCTCACAGTGCCACCTTGTCAGGAGTTACAGAAGGAAAGACAGGACTCAGGCACAGGGTGGGTTAGCCTTGCCCCAAATGCCAGGACCCAACCGTGATGGCCAGTTAGCCACTGTTCTCCCTGAGGGGCAGAAGCCCCACCATGGGTCCTGTCCCTCTGGCCTTACACAGGAGGCCCCACAGGTCCTTCTGTGCCACCTAGACGCACCTGTGAGCCGGTGCCAACCTCAGCCTTGACCCTTGGCCATCAGCCAAGCAACGTCAGCCAACCAGGCTGCTCACTGTGGCCACAGACAAGCTGGACAGCTGTGGTGGCGAGCGGTTTGGGGGCTGGGGCTGCTGTGTGCTTGTCCCCCTGCCCCCAGGCTGTGTGATTTGTCTCCCAGCCTAGCTTGACTGCTTTCTCAGGATGTTCCTGTGTTTATGAAAGCGTGTTTATTTCCA EMBV3_04560 AACTTTCTCCTCGCAAATAGGCTTCAGATATCAATCCCTCCCATGGCCTCAAGCTACGGC Gene BVV0102_345383 + 1 EMBV3_10468 GK000030.2:68288392-68301539 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060244 TCONS_00060243 TCONS_00251852 TCONS_00060246 TCONS_00060247 TCONS_00060245 2 XLOC_036632 XLOC_154793 Coding TCONS_00060247 XLOC_036632 Coding Coding LOC100847168 15:80106906-80121324 = TSS45065 13415 1 TCONS_00060247_16 318 0.813268729034663 2 0.0696400083235069 9.74881464238676e-08 4.39784517258023e-07 3.42331638399853e-07 5.38543698196566e-08 3.94503123443177e-08 0 0 2.62868703938207e-07 1.30796614632668e-08 6.95690797797859e-05 2.88953059015478e-05 1.22349706541304e-09 4.70489549500157e-06 5.62135455232058e-05 9.9319988123883e-06 0.000315872745530088 0.000701779134558836 0.000937633434487817 4.84601613087345e-07 8.50884315735058e-07 2.4430993237784e-07 0.00104995025431993 0.000777186600043031 0.000896388649140197 1.79367265630186e-07 5.74888179882457e-07 5.0405168906463e-07 0.000195133138509972 8.78589577356441e-05 0.000483238958627208 XR_238500.1 LOC788150 PREDICTED: Bos taurus zinc finger protein 480-like (LOC788150), 0.0 1945 85.44 0.125307491613865 TCONS_00060247_16 sp|P61570|ENK17_HUMAN ENK17_HUMAN HERV-K_11q22.1 provirus ancestral Env polyprotein; 6e-25 106 30.41 0.60377358490566 0 coding 0 0 1 1 0.460273172145464 0.29580616187116 -0.159039202182455 0.0248932149049435 GTGGGACGGTTAGGATTGTACCTGTGGGTGGCTGGCACCCCTCTGCAGTTTAGGCAGGGTGAGGAGGGTACAGAATCAGTAAGAATATTCTCTAGAAGAATGGGTTTCTCTGCATCTTAGAATAAACAAATGTTTATTGAAATATTACTTCATATGTTAGCCCATAGAGGCATTAAAGTAAGCAGAGGAAGACTGTCTAAATTTCTACGTTTGTTTTATACTTTGCATGGGCCAGAAAAGGTTTCTGTAGATGCTTTTGTTCTGTGGAATATCATTATAAATATCCTGGATCCCCGTCATGAGGCTGTTAGATAGCCTATGGGGGAGGCTATAGCGGTGGATGGTGGTGGGTCTCCACCTTCTGTGCAGATCATGTTTTCTGCCATTGATGAAGAAAGGAGGGAGACTGTGCTCTACCTCCCAAGGAAGGAGAGGGCTTACAGGATGCTGCAGCCAGGTGCCCTGGCGAGCCCACTCCCCCTCTACACAAACCTTTACAAATTTATCCACCACTTTTTTATTTAAGGCGACCACCGCCACCTCTGCTTGCACCTCCCAGGGCCCAGGAGTTCCCCACTTAGCCTCCAAAGCGTCCCAGAGCATTGTCTAAGGCTGAGAAAGACAAAGAGTTTTTTTTTTTTTTTTTAAACAAAGGAGCTTTTTAAAGCAAGCGCAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTTAGGGGGGCCTCACCAGGCTAAAAAAAAAAAAAAAAAAGGATTAATCATAATGGAAACGATTCTACAAATAAAAAATGTTTCTCCTGTGGCCAAATGGGGGCATTTTTGCCAGCAATGTCCTGCCAAGCAGGGACAACAAGCCCTGCCGATCAACCCGAGGTAGCACAGGACTGGACCTCAGTTTCACCACTGCAACAATATTAACCCCTGACATGCCAGTTACTCTGATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGGCTTGTGCTGGGGCGTAGCTCGCTTTCCCTTCAAGGAATTTCGGTGGTGCCTGGTGTAGTAGATTCTCATTATACTGGGGAAATTAAAGTTTTGATCTTGCAGCCTACTAAAACTGTGCAAATTAATAAAGGTCAAAGAATAGCACAGCTTTTGCTTTTACCTTATTATCAGACAGGAAAAACCTTTACTTCTTAAGCTAGGGGCCCCAGAGGATTTGGATCCAGTGATCTAGCTTTTTGGGTGCAGGAAATTACAGCTTCTAGACCTTCAAAAGATCTTTTAATTCAAGGAAATAAAATGTCAGGGCTGTTAGATACTGGAGCAGACGTCTCTTGCATTGCTGGAAAAGATTGGCCCTCGTCCTGGCCGACACGTTTGACCAGTGCAGGCTTGGTAGGAATAGGGTCAGTGCCCTCAGTTGCTAAGAGCTCACAGATTTTGACATGGTCAGATGAGAGGGGGGCACAAGGCACTTTTTGTCCATATGTAGTTCCTTCACTACCTTTTTCTTTATGGGGGAGAGATATATTATCTCAGATGGGAATGCTTTTATATAGCCCAGATGAAAAGGTTACTAATCAAATGCTGCAAATGAGGTATAATCCTGATAAGGGGCTTGGTAAAGATCAGCAGAAAATTGTTTCTCCATTAGAGGCGGTTCCTAACAAAAATACAGAAGGTCTGGGATATTCAAATTTATCCTAAGGCTGTTGCTCTTGCTGTCGACCCTATTACCTGCAAATCTGATGATCTGGTGTGGGTGGAACAATGGCCCTTAACAGCTGAAAAGTTACAGGCAGCTGAGGATTTAGTTATGGAACAACTGGCAGCCGGCCATATAGAGCCTTCTAATAGCCACTGGAATACTCTTATTTTTGTTATTAAGAAAAAAATCAGGAAAATGGAGATTGTTACAAGATTTGAGAGCTATAAACACAACTATGGAAGACATGGGGGCCCTCCAGCCGGGCCTCCCTTCCCCAGTGGCTGTGCTTTTCAGTATAATATGATGGTTATAGATCTAAAGGATTGTTTCTTTGCCATTCCCCTGGCTGATCAAGATTATAAACGGTTTGGTTTCAGTCTCCCTTCAGCTAATTTTAAACAGCCCTATAGAAGTTTTCAATGGAAGGTTTTGCCTCAGAAAATGAAAAACAGCCCTACCTTGTGTCAGAAATTTGTAGACCAAGCTGTGAAAAGTGTTAGAGGAAAGTATAAAGATCTATATTTGATACATCTATATTTGGCAGCTCATAAGGACAGAGCCTTGTTGCAACAAATTTTATCTGAATTGATTGAGGCCTTGGAAAGCAGGGGTTTAAAGATAGCTCCAGAAAAGATACAAGTAGATCCTCCTTTTTCTTATTTAGGGAGGGTATTAAATACCCATACCATGAGTCATGCTCCTTTGTAGCTGCGGAGAGATCCTTTACTAACTTTAAATTGTCACACGACTGTATGTTCCTCGGTTCTTTGTCTCATCACAACAAAGATTTGGAGCAAAGGACATTAAAGCCCTTGGTGCATCACAGCTCTCGGGTCTTGGACAAATCGTGTTATAGCTCTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAGAGAGAGAGAGTGAGAGAAAGAGCGCACGCACATGGGAGAGAGAGAGTCCAAGAGAAAGTGTTTTGGCTCCTCCTTTTATATGTTTTTTCTTCCACCTAGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGGCTGCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTCGGACCTTCCTTTGACCTTCCTTGTCTTTTAGCCACCACCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACAAAATGATTTCCAGAAATTATTAGGGGATATTAATTGGATACACCCACATTTAAAACTGACTACTGCAGATTTAAAGCCTTTGTTTGATTGCTTAAAAAGCGATCCTAATCCCAGTTCTAAGAGAAAGTTGGTTAGTGAGGCAGAGTTGGCTCTTGTTAAAGTGGATGAGGCTTTAAATGATCAGTTAATTAGGGTTAATATTACCAGAGGATGGGATTTAATTATTCTTGCCTCAGAACATACACCTATAGGATGCTGTGGCAAGAAGGCCCATTGGAATGGCTCCATCTACCAGTGACCCCAAGAAAAATAGTTTTATCTTATCCCAGCTTGGTGGCACAATTAATTATAAAAGATAGAAAAAGAGTGTGGAATTTTTTGGAAAAGAAGTAGCAAATATAGTGATTCCAATCAATAAGGATCAACTGCAATTTCTTTTACAAAATAGTGATGATTGGCAAGTTGCCCTGATAGATTTCAGGGCAAATTTTGTTTCATTTGCCCTCAAGCCCCCTACTGCATTTTTTTGAAAACACATCCAGTGATTTTTCCAAAGAAATTTTCTATTCAACCTCTGGAAGAGGCAATTTTAGTTTTCACAGATGGTTCCTCTAATGGTAAAGCAGTCACAATTATTGATGGAAAATCCCATGTTCAGGTAACTGAAGAGACATCGGCCCAGAGAGCTGAATTGAGGGCGATTATTTGGGTTTTTCAACATTTAAGAGACCACACCTGTTGGGGGCCAGAGTGAGGTACTCTGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAAATCCTCGAGCGTCTACCCCCATAACCAGAGCCTGCCGACTTTACTACTTTGTGCTCTTACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACCACCTCTTTCGGAGAAGGAGTTAACCTAGAGCTTCAGTCAATAAAAACTCTTGGGTGTGACAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTGGCCTGCCTGACAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCATGAGAGGCACGAGATGCTTTAAACCTTCTAAAAACAGGTTCCTTAGAAAAGTTAGGAAACTATTAGTATAAGTATAATGGGCTAATTAGAAATTGTGTTGGTGAAGAGTTTTTCATTTGCTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACATATTAATGAATATATAGAATTGACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAACTAAAACCCACTACACCCTCACCCTGTAGGAGTGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTTAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCTCTCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTTTGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAGCTTCTTGTCTTGAAGTTTCATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATATCTAATTGAAGCTATTGTATCCTGATCCTCGCCTATGCCGTCTCTCCTTCGAATACCCTGGATCAGCCGGGGCTGGTCCCCGGCACACACCTTCAATCTTCTGACTGACTCCCGATATATTGTAGGGTTGTTTCCTCATATTGAGACTGCTAATATTACGGAAAATAAAACTGCCATCTTCTCCTTGTTATCTGATTTATAGAAGGAGATTAAACATAGAGATAAGAAATATTTTGTGGGACATATTAGAGCCCATTCCAGCTTATCTGGCCCTTTGCATGAAGGAAATGCTTTGGCAGATGCATTAACTAAAGTAATTGCTTTAAACTTACATGAAAAGATTGACAAGGCCAAAAATTCTCACAAAATTCATCATCAAAATGCAGCTGGCTTAAGGTATGAATTTCATATCCCTAGGGAAGCAGCTAGACAAATAGTTAAGTTATGTCCAAATTGCCCAACATTTAATCCATCTATACAATTAGGAGTAAATCCCTGAGGCCTTAGGCCTAATGCTCTCTGGCAAATGGATGTAACTCATATTGCAGCCTTTGGAAAACTGTCCTTTGTGCATGTTACCATGGATACCTTTTCTCATGTTATTATAGCCTCTGCTAGATTAGATGAGGGACAGCGGAGCCTGGTGGGCTGCCATCTCTGGGGTCGCACAGAGTCAGACAGGACTGAAGCGACTTAGCAGCAGTAGCAGCAGCAGATTAGATGAAGCAACAAGAGATGTAACTGAGCACTTGTTTCAATGCTTTTCCCAAATAGGACTCCCCGAACAGATAAAAACAGATAATGCTCCAGCTTATACTTCTTCTGATTTTAAGAGATTCTGTCAACAATTTTCCATAGTACATTCAACAGAAATACCTTATAATCCCCAAGACCAAGCCATAGTGGAAAGGGTGCATCAGACTTTAAAAAGTCAGATAGCTAAATTAAGACGGGGAGAATTTAAATATTCCTCTGCACATCATGTTTTACACCATGCTTTGTTTGTAATTAATCATTTTAATGTGGACACACAAGGGCAGACTGCAATGATGAGACACTGGACTCATGAAGGGGCTACGATTTGGCCTCTGGTTAAGTGAAAAGACCTCCTTACAGGAGAGTGGAAAAGGCCAGATATACTGCTAACTTGTGGGAGAGGGTATGCTTGTGTGTTTCCACAGAATTCCACTTCTCCTGTTTGGACCCATGAGGTTACTAAAATCCCTGAAGTCCTGGAGTCCAGGACCGAAAAAAGATGGGGACACCAGAAGCTCGTTGAGTCCAGACCTGAGGAAGCCAAGGAAACACCAAAGGGCGAGTGACCCTTCACCTGAGGCTTCACGACTAGTACATTGCTTCAGGCACCTGGAACTTCAGGAGAGACATGCTGATCGAGTTCAACCGTATTCTGCCCCACCTCGTCACTGTCATCGTACTCAAGCAACCACCTCCAGCACGGAGAAATGTTTACAATGTTATACGTGTGAATTGTTTTATATCAAATTGTGTTGATGGGAATGATTATAATAAGTATAAGGCTGTGATGATTGTAAAGCAACCACCATATTTGATGGTTCCTGTAAAATTAGAGGGACAATGGTTTGATGATTATGCATTGAAAGTTTTATATGAACTTAATGGCTTAATTTCTCAACCTAAGAGATTCATTGCAGCTCTGGTTGTGGGAATAACTGCTTTGATTGCCATAATTACATCAGTTACGGTTTATGCTGTTGCCTTGTCAAAAGAAGTGCATACGGCCTCGTTTGTCGATCAGCTGTCCAAAAATGTCTCTGTAGCTCTTACTATGCAGGAAATTATAGATAAGAAAATAGAAAATAAGGTCAATGCTTTAGAAGAAGCAGTTCTGCTTATGGGGCAAGAAATTACAAATTTAAAAATTAAATTGTCTTTAAGGTGCCATGCTGATTTTAAATGGATGTGTGTTACCCTTCTACAAATGAATGAGTCCATGCACTCTTGGGAACGCATTAGAAATCATATTTTAGGCGTCTGGAATCATTCGGATTTTAGTATTGATATTTTTAAGTTACATCAGGATATTCAGAATATGAAGCAGGCGGAGTCTGACTTTTCCTCTCAATGGCTTTCTAATTCCCTCTTTGAAAATCTGGAGGGATATCTTTCCCATGGATCCTTTTCTACAATAATGATTAATGTGGCCATGTGCTTATGCCTGTTAGTTCTGATTTGTGTAATAGCCCCGTGCCTTTTCAGAATACTCAGCCGAAGTGTCTCTGCTCTATCTACTGAGTTTCATACCTATGCTCTAAAAAATAAAAAAAGGGAAGATGTTGGGAGCCGCCTTAGGCATTACTGACAAAATGGAGGCAGGGTCCCCAGCCCCCCTCTCCTCATTCCACAGGCACAGAGCCTGGGATGAAGGAGTTAGGCCTTTTAATTCTGACTTGTCTTTTCCTCTCCTTGGCGAAGTTGACTGAAAAGGAATATTAAGGTGCTTATTGGTCTTGAGAGGAGCATGAGAAGGCACAAAGCCTTCTGCAGCATTGCTCAGAAAATATTTCATAAAGTTAATCATTGACATTTGTTCAAGGACTTTTTACAAAAGACTGTTCCAGGATGAGCACATAGGCTGTAGCTTGAGGCCATGGGAGGGATTGATATATGAAGCCTATTTGTGAGGAGAATGTTTATGGCAAAGGAGTTTACTGAATTTAGGGCTTAGAAACAATTAAAATAGTTAGAAGTTAAAGATTTAAGGAATGCTGTAAAGTTAACGTATTTTACCATAGCTTATAGAAGTTAGGAATTTTTAGAGACACTATAGCTAGAAGCCTTTTTAGGAGATAGTGAGCTCAGGATGTTAGGGGCAAACAGGACTTAGGAGGATAAGTAGTAAACTGAGGAATGTAGCATGAGTTACAATGTAATCACAAGTTAACTATAGGACACATTAGAAGAGGTAGATAATAGATGATAAGGCTGATTCTGAGAGAATCACTGAAGCAGGAACTCTGTTTGAAGAGCAACAATGATTTATGGAGGTAATAAATCTGGGAGAGGGGCAAGTGAAAATGTCAAACCTCTGGCCTAATGTTTTTGTGAAAGTATAAAAGAGAATCTTAAACTTGAAATAAACAGGCAGTCCATAGAAAAATGAGAGGCTGTCTCATTGGCCGACACCGTCATTTCTTCAGGTTGAATCCCTGGTTGCTGGAGTTGGATTCTGGCACTAGTTGTTGATATGACTGGTGATGGAAGCAAGGTCCAGTGCTGTAAATAACAATATTGCATAGGAATCTGGAATGTTAGGTCCATGAATCAAGGCAAATTAGAAGTGGCCAAACAGGAGATGGCAAGAGTGAACATCGACATTTGAAAAATTAGTGAACTAAAATGTACTGGAATGGGTGAATTTAACTCAGATGACGATTATATGTACTACTGTGGGCAAGAATCCCTTAGAAGAGATGGAGTAGCCATCATAGTAAACACTAGAGTCTGAAATGCAGTGCTTGAATGCAACCTCAAAAACGACAGAATGATCTCTTTGTGTTTCCAAGGCAAACCATTCAGTATCACAGTAATCCAAGACTATGCCCCTATCAGTAAGGCTGAAGAAGCAGAAGTTGAATGGTTCTATGAAGACCTACAAGACCGTTTAGAACTAACTCTCAAAAAACATGTCCTTTTCATTATATGGGACTAGAATGCAAAGCTAGGAAGACAAGAAACCCCTGGAGTAACAGGCAAATTGGCCTTGGAGTACAGAATGAAGCAGGGAAAATGCTAATAGAGTTTTGCCAAGAGAACACACTGGTCATAGGAAATACCCTCTTCCAACAACACAAGAGAGGACTATACACATGAACATCACCAGATGGTCAACACTGAAATCAGATTGATTATATTCTTTGCAGCTAAAGATGGAGAAGCTCCATCAGTCAGCAGAAACAAGATGGGAGCTGACCGTGACTCAGATCATGAACTCCTTATTGCAAAATTCAGACTTAAATTGAACAAAATAGGTAAAACCAATATATCATGCATGTATGACCTAAATCAAACTTCTTATGATTATACAGTGAAAATGGGAAATAGATTTAAGGGATCAGATCTGACAGAGTGCCTGATGAACTATGGGCAGAGGTTTGTGACATTGTACAGGAGGCAAGGATCAAGAAAATCCCCAAGAAAAAGAAATGCAAAAAATCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAACAAAAGGCAAAGGAGAAAGGGAAAATATACCCATTTAAATGAAGAATTCCAAAGAATAGCTAGGAGAGATAAGAAAGCCTTCCTCGGTGATCATTGCAAAGAAATAGAGGAAAACAATAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAGTTACAGATACCAATGGAACATTTCATGCAAAGATGAGCTCAATAAAGGACAGAAATCATATGGACCGAATAGTAGCAGAAGATATTAAGAAGAGGTAGCAAAAATACACAGAAAAACTGTACAAAAAAGATATTCACGGCCCAGAGAATCATGATGATGTGATCACTTACCTAGAGCCAGACATCCTGGAATGTGAATTCAAGTGAGTCTTAGGAAGCATCACTATGATCAAAGCTAGTGGAGCGGATGGAATTCCAGTGGAGCTAATTCAAATTCAAAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCACATTTGGAAAACTCAGCAGTGGCCATGGGACTGGAAAAGGTCAAATTTCATTCCAATCCCAAAGAAAGACAATTCCAAAGAATGCTTAAAAATACCACACAATTGCACTCATCTCACATGCTAGTAAAGTAATGCTCAAAACTCTCCAAGCCAGGCTTCAACATTGCATGAACCATAAACTTTCACATGTTCAGGCTGGTTTTAGAAAAGACAGAGGAATGAGAGATCAATTTCCAACATCTGCTGGATCATCAAAAAAGCAAGGAAGTTCCAGAAAAAGCATCTATTTCTTCTTTATTGACTATGCCAAAATCTTTGACTGTGTGGATCTCAATAAACTGTGGAAAGTTCTGGAAGAGATCGGAATACCAGGCCACCTGACATGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTATGTCAAAGCTGTATATTGTCACCCTGTTTAACTTATATGCAGAGTACATCATGAAAAATGCTGGGCTGGAAGAAGCACAAGCTGGAATTAAGATTTCTGGGAGAGGTATACAGATGATATCACCCTTATGGAAGAAAGTGAAGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGAGAAAAAGTTAGCTGAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGTTCCTATCACTTCATGGCAAATAGATGGGGAAACAGTGGCAGACTTTATTTTTCGGGCTCTAAAATTACTGTAGATGGTGACTGCAGCCATGAAATAGAAAGACACTTACTCCTTGGAAGAAAAGTTATGATCAACCTAGACAGTGTATTAAAAATCAGACATTACTTTGCCACCTAAGGTCCGTCTTGTCAAGGCTATGGTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGTAGTATAAAGGATGCTAAGCACCGAAGAGTTGACGCTTTTGAACTGTGGTGTTGGGGAAGACTCTTGAGAGTCCCTTGGACTGTAAGGAGATCCAACCAGTCCATCCTAAAGAGATCAGTCCTGAATGTTCATTGGAAGGACTGAACTGAAGCTAAAACTTCAATACTTTGGCCACCTGACGTGAAGAGATGACTCATTTGAAAAGACCCTGATGCTAGCTAAGATTGAAGGCTAGAGGAGAAGGGAAAACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGACGTGAGTCTGAGTGAACTCCAGGAGTTGGTAATTGACAGGGAGGCCTGGCATGCTGCAGCCCATGGGGTCACAAAGAGTCAGGCACGACTGAGTGACTGAACTGAAACTGGCAGGATTAATGGCATGATCTTCATTTTTTGAATGCTGAGTTTTACGACAGCTTTTTGACTCTCCTCTTTCACCTTCATCAAGAGGTTCTTTGGTTCCTCTTCACCTTCTGCCATATAAGTGGTATCGTTTGCATATCTGAAGCTGTTAATATTTCATCTGGCCATCTTGGTTTCAGCTTGTGTGTCATCCAGCCTGGCATACTGCTTAATATGCTTAATACATATTGCTTAATGTACTCTGCATAGAAGTCAAAGAAGGAGGGTGAAAAGCACAGGCTAGAATTTCACATGATGTAGTCTGCATAGAAGTTAGATAAACAGGGTGTTATTAATTAAGCAGAACTTAAATAAGGTTGCCATGGTAATCTCTTCAATCTGGAGACATGGCATATTACCCCATCCATCATTCATTCATTCATTAGTGCCCTCAGAACTAAACTACTGCACAATTGGACGCATCTCACATGCTAGTAAAGTAATGCTCAAAATTCTCCAAGAGAGGCTTCAACAGTATGTGAACTGTGAACATCCAGATATGCCATCTGGATTTAGAAATGGGAGAAGAACCAGAGATCCAATTGCAAATATCCACTGAATCATTGAAAAAGCAAGAGAGTTCCAGAAAAAACAACTACTTTTGCTTTATTGACTATGTCAAAGTCTTTTACTGTGTGGATCACAGTAAACTGGAAAATTCTTGAAGAGACCACCTTACCTGCCTCCTGGGAAATCTGTATGCAGGTCAACAAGCAAGTTAGAACTGAACATGGAACAACAGACTGGTTGCAATTTGAGATAGGAGTATAGCAAGGCTGCTTATTTGTATATTGATACCATGATTATTTAACTTATATGCAGAGTACATCATGTGAAATGCCAGGCTGGATGAAGAACAAGCTGGGATTAAGATTGCTGGAAGAAATATCAATAACCTCAGAAATGCAGAGCACACCACCCTTATGGTAGAAAGCAAAGAAGAGCTAAAGAGCCTCTTGATGAACGTGAAAGAGGAAAGTGAAAAACTTGGCTTAAAACTCAACATTCAAAAAACTAAGATGATGGCATGAAGGTCCATTGCTTCATGGCAAATAGATGGGGAAATAATGGAAACAATGAGAGACTTTACTTTTTTGGTCTCCAAAATCACTGCAGATGGTGACTGCAGCCACGAAATTAAAAGATGCTTGCTACTTGAAAGAAAAGCAATGACCAACCTAGAGAGAATATTAAAAACCAGAGACACTACTTTGCCAACAAAGTCCTATATAGTCATACTATGTTTTTTCCAGGAGTCATGTATGGATGTGAGAGTTAGAGGACAAAGAAAGCTGAGCACCAAAGAATTGATGATTTTGAACTGTAGTGTTGGAGGATACTCATGAGAGTCGTTGGACTGCAAGGAGATCCAATCAGTAAATCCTAAAGGAAATCAGTCCTGAATATTTATTGGAAGGATTGATGTTGAAGCTGAAACTCCAATACTGTGGCCACCTGATGCAAAGAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGTTTGAAGGTAGGGAGAGAAGGGGACAACAGAGGATGAGATGGTTAGATTGCATCACTGACTTGATGGACATGAATTTGAGCAAGCTCCAGGAGTTGGTGATGGACAGGGGAGCCTGGCGTGCTGTAGTCCTTTGGGTCACAAATAGTTGGACACAACTGAACAACTGAACTGAACTGGTCTGTGACTTGGAGCAATTTCTTAAATTATCAAAGTCTGTTTCCTTATTTGCAAAATAAGGATCATATACAAAGCTTTGATCTACTGGCATTTGTGTTAAGTAATGAATATTAAAGACATTGGTGATTTCAAAGTGTTTTTTTAAGCTAAATCCATTGCTATTATGGATACTGAAAAATACCATCAGTTGATTAGTACCGCTATATGATACTGCAAGGTACAAATTTGAACAAGGCACATTCCCTGTCTTGTACTTTTAACTATCTAATGCAGTAATATTCCAGGTTCACCTGATTTACTCTCTGCTTACTGCTCTGGCTTATCAGATATCAGTTTTCTTCATGCTGGGTAAAAAAAAAAAAAAAAAAATTCCAATTGAGAACAATCAGAGGGTTTGATTTCAGTCCCTTACCTTGAAATGAATCATTTGATCATTTACAATTCTCCGACCCCATGAAAGCAGCACCCGCACAAAACTCTATTTCCTCAAATACCAGGTAGATGAGAAATATAACACATGCGGGGGGCGGGGGGGGGCGGGGGGTGGGGCCGGGGAACCGGGTGAGGAATGGATCTCACAGAAAGCAAATGTCTCTCCAAATTCACATTTCGGACATCTCTGGTAAGTTCTTAAGTGCAAAGCAGAATCTTTAAAGACTCCCTTGTACAATGTTTGTAATATTGTATATAAATCTCCCAGTTTGTACACCTCATTAATTCAGTCTACATCTATGTAGCAGGAAACTGAAGTAATCAACCAGACAGTGAACACTGGCAACTTTGCCATTGAGAGGCCTGAACTAGTCATCTAAGTTGGTGACATTAGGCAAAGTGATTGGGAAAAAACGCTTCT EMBV3_12808 AAAGCCAAAAGTTTGACCACGCAGCAGCGATACAGAGGTACAGAACGAGAACAGCTCCTC Gene GeneID:286772|NPC1:NM_174758:10_cdna Constitutive 0 NULL GeneID:286772 24 GENE NPC1 NULL Niemann-Pick disease, type C1 EMBV3_28444 GTGGACACTCCAGGACACTGCCGCAGAAGTATAAATGCTACAGACACAAAGCATCACTTG Gene GeneID:538167|CCNYL1:XM_002685539:127_cdna UTR3_Alt 2 NULL GeneID:538167 2 GENE CCNYL1 NULL cyclin Y-like 1 EMBV3_42113 AGTGCACTGCCCAGGGGGTCCCAGGGTGAGGATGAAAGAGAACAGTCTGAGAATCACAAT Gene GeneID:540682|PHKG1:NM_001046486:377_cdna Constitutive 0 NULL GeneID:540682 25 GENE PHKG1 MGC137450 phosphorylase kinase, gamma 1 (muscle) EMBV3_26418 TATTGGAGAGCTGCTGTGGGGCCAGGTCATTTCCACGATACCTACCCAATCCCTGAAGTT Gene GeneID:282146|ATP2B4:XM_002693900:236_cdna UTR3_Alt 2 NULL GeneID:282146 16 GENE ATP2B4 PMCA4 ATPase, Ca++ transporting, plasma membrane 4 EMBV3_18137 TGCCAGAGAGGAGATACCTACTGCCATAGCGAGGGGACTTATGAGCCAAGACTAGAGTCA Gene BVT0102_226445 + 0 NULL GK000003.2:29407672-29506173 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172742 TCONS_00172743 TCONS_00172747 TCONS_00172741 1 XLOC_104204 NonCoding TCONS_00172741 XLOC_104204 NonCoding NonCoding - 3:29407899-29420843 - TSS128582 4010 4 TCONS_00172741_1 94 0.36783042394015 4 0.690489067449587 2.36616514452611e-08 9.26374536976623e-05 0.000213623084878209 0.000150311703721374 3.92008383335117e-10 1.45577956208718e-10 2.07709538672074e-09 0.000124524087207821 9.72936819269535e-05 2.06502100464805e-10 1.39429320337154e-09 0 7.4403514522135e-05 0.000629934419978869 2.01650570203022e-05 1.53356142663404e-19 0 1.59752623964312e-14 0.000226932763313435 0.000669753903658971 0.000260777546700889 0 0 4.24198760274612e-21 0.000183069712320193 0.000266713340158297 0.000365694962087445 5.37714073405929e-22 5.7126320551771e-16 0 XM_617812.6 SYT6 PREDICTED: Bos taurus synaptotagmin VI (SYT6), mRNA. 0.0 827 100.00 0.113965087281796 XM_005258195.1 INO80C PREDICTED: Homo sapiens INO80 complex subunit C (INO80C), 2e-92 345 70.36 0.21645885286783 0 noncoding 0 0 0 0 -0.743703731662924 0.0632158406779002 -0.027418240972944 0.593785901846565 GTGTGAAATGGGAAGAAGATGGTTTGCCCTCAGTAGTTATGCCTGAGCTGCAATATTGTTGGTGGCAGGGGTGGGGGGATGTGACCTTCAGGGCACAGGGCAGAGTTTCCAGAGTGGGTGACTTTGCTGCTAATACCCGCTCCTGGTCAGGTGATAGTGTGCTGCCCATGGAACTGCTAGATAGATCCTGGGTTGGGGGGCATAATCCCACCCCAAGACTGTCCATGAACTCAGGCCTCTGTGCCTGCCTGCCATGTGGAATCCAGGAATTCAGAGCACAGTCACCCTATAAGCTGGGTCTGGGTCAGGGTTTCCTTGATTAGGAACAGCTGTCCTACTCCAGGTAAAGCCAATCTCTAATTCTGGGACCAAATGGTCCTCCATGCATGGGCCTTGACTTCACTGGCATCAGACCCATCTGCTGGCTTGTTGAAAAACAGATTCCTAGGCTCCACCCCAGGTCTAGTGCCTCAGAATCCCTGTGGTAGTGATTTACATTTTAAACAAAGTTTCCAGGTGGCTTGAGTGCACAGTCAAGTTTGAGGGTCATTGCTGGAGACCATCCTCATTACCATGACTCGATTTTCCATAGACCTTTCCTGAAGCACAGGCTTGTGTTCTGACATGGGTACCTGACTCTAGTCTTGGCTCATAAGTCCCCTCGCTATGGCAGTAGGTATCTCCTCTCTGGCAGGCCTGCCACGATGGGGCACCGGGACATGCAGAGGAGCAGGGGAAGCTGTAGTGACCACCCTGGTCACCGATGGAGGGAGAGTTGGGAGCCAGGGATTAAACCAACGGGCCAGTGCTAAAGTTCATGGAAAGCCAAGGGAGAAGTTTGCTTTGGGAAATACTGGGTTTAGGCTGCAGCTGGACATCAAAGGCCTTGTCTGAGGCATGGGGGCAGTTTGGGCCTGGTGGGTCTTGGCAGCTGAGACTACCACCAATATCTGCACAGAGACAGTAGGTGCTGTGAAGGAGGTGGCGGGTGAAATCGTCCAGGCAGAGGGCAGAGAGCTGGAGAGAGGCCAAGCGCTGGGCCTGGGGGCCTTCTTAGTTCTAGGGGTAGAGGTATAAGAGTTGGGATGAATGCAAAACAGCATCCCGTGAAGGAGACCAGAGTCAGGTAAGGAGAGAACCTCTGGAAGGGAGGGTTGATTACGCAGGAAACACTCCATCCGGGAGCCACAGAGATGGAGTGGGAACATTTACTTTAAAAGCCATTGGCTTTGCGTCCTGGCGAGGAGACAGTGGAGGCGAGTGTTCGTGAGCTTTGGCTCTGCTCTGGATGGGGGTATGCCTGGGCGGTGGAGCACCTGTGCGTTTGGCTCTCCTTAGGGGCTGGCATGGACTCTCCCACTGCCCGGCTGCAAACCGGGCGGTAGCCCCTCCTCTGGCATGTCACCGTGTTCTCCTGTGCAGCTGGGCTTGGCCAAGCCTGAGCTATTGCCCCATGATCATCCTGTGCTGGCTCCCCCTGCCCTGCCCCACAGGCAGCCTAGAACAGCCTGGCCCTCCTCTGCTCTTCCAGCCAGAAGCTGCACTCTGCTAAATGAGCTGGAGTTGCTGGAACTTTTCAGGACTGCCTAGGCCACTTAAACTTCCAAGTCGGTTGAAGACCAGCCAGTTTTCCACTTGGATTTGAGTTGCCCCTCCTCCTCGCACCTAGGTGCCTGGGGAGGCTGAAGAGACTGGCCACTCAGCTGTGGCTGAAAGCAAGGAGGCTCACTCCAGGGGGCAGGCATGGAGCTGGGGAGGAAAACCGATGGGTGCTGCTTGGTTTCACGTTTTTTCTCCCCAAAGTGAAAATCCAGCTGGCTCATTCCCCTCCGTTTGCCTCTGAAGCTGTATCTGGTATTTATAGAGGACTGAACCAAGGGCCAATCAGCTCGGAATGGAAATTCCTGAGCCTGGAGTTCTCTGGAGCAACCGGGCTTTTGGCTTTCTCTCTTCCTGGAGTTCAGCTAAGGTTTTCTCTTGAAAACTTTGAAGTTCTGAGAAGTTTGAGGAGAAATAGAGTCATCGTAAAATTCACATAGAATCACAAAGGACCCCAAAGAGCTAACAGAATATTGAAAAAGAACAAACTTTTATACTTCCTGACTTCAAAACTTAGTACTTTAAGCTATAGTAATCAAAACAATATGGTACCGGCTAAAAGACAGAAATAGAGGTGATGCAGAACAGAGAGCCCTGAAATAAACCATTACGCATGCAGCAAATGGTCAAGGTTGCCAAGATCATTCAATAGCGAGAAGACAGTCTTGGCAAATGATGTAGGAAAAACAGGCTATTCACATGATAAAAGAATAAAGTTGGACCCTTATCTCTCAGCCTACACAAAATTTAACTGAAAATGGATCAAAGACCTAAGAACTAAAACTATAAGACTCTTAGAAGAAAACACTGGAGGAAATCATAGTGGTATTAGATTTGGCAATGATTTCTTGAATATGACACCAGAAGCACAGGTAACAGAAGAAAAAATAGACAAGTTGGACATCAAAATTAAAAACTTTTGTTCATCAAAAGGACATGATCAACAGAGTAAAAAGACAGCCCACAGAATGGGAGACAATATTTGCAAATCATAAATCTGATAAGGGATTAATATATTGAATACATAAAGAACTCTTAAAACTTAACAATAACAACAGCAAAAATTCAAAAGTAACCAAAGGACTTGAATTGACATTTTTCCAGTGAGGAAATACAGCCAGCCAATAAGCACTTGAAAAGATGCTCAACATCACTAATCATTAGGAAAATGCAAATCAAAACCACAAGATATCGCATCATATCTATCAGGATGCCTAACATCAAAAAAACAAAAAGGTAACAAGTACTGTTGATGATATAGAGAAATTGGAATCTTTGTGCACTGCTTGTATAAGATGATGCAGTTGCTATGGAAAATATTATGACGGTTCCTCAAAATATTAAAAATAGAATTTATCAAGGTTCAGCAATTCCACTTCTGGGTATATGCCTCCTCAAAATTGAAATCATGAAGAGATACTTGTGTACCTGTACTCACAGCAGCATTATTCCAAGAGCAAATGGTGAAATGTCCACGATGGATGAAGGGAAAACAAAATGTGGTACATACACACAACGGACTATTAGCCTTAAAAAGGAAGGAAATTCTGACACGTAACATGGATGAACCTTCAAGACATTATGCTAAGTGGAATAATCCAGGCACAAAAGAATAAACATCATATGATTCCACTCTTATGAGGTGCCTAGAGTAGTCAAATTCATAGACAGAAATCAGAATTATGATTGCCAGGGGCTGGAGAGAGGAGGAAATGGGGGCTGCTGGATAACAGTCTGCAACAGGATTTTCTCATCAAGTATTGCAAAGCAGACGAAAGCACCACACTTTCCCCACATGAGTGTGTGATCCGCTTCCCTGGAGAAGCTTCAGCATCTGGAGGGGCTGCTTGTTGAGCCAAAGAGCTGAGGAAACAGCAGAGCTCCATGTACCAAATGCTATGTGAGCTACAAGTCTGACAAAACTCCAGGTGGATTCCAGCCTTCCAGGGCATGCAGAACCGTTCCTAAAGAAAGCGACTCAGCTCCCATGAGGGATCAAGTCATGTTCAATTCAGGAGGAAAGTTCACAATGACGGGGAGCCAGGAGCCCTGCACGACCAACCAGTCGAAGGCTCACAGACGGCTCTGAGTGCTCGTGATTTCAACCTGGGACCAGGAGTCTGCACCTTGGTTTATGTCATATTGGCAAAGAGCTTCTAAGAGTCATAAGTCACTTTTGTAAAGGCTCTTGGCCAGGTCTGCAGCTTCCTGCGGGCCACTGATCAAAGCAGCCATTGCTCATCCTTCTCCTCCAGGGTTATGGAGCTCAGTGGAGACACAAAATTTCAGAAATTCAGACCACCTTCCCACCAAAGACGACTATTTTACATTGTATTTAATAGAACCAACATCTGGGCTCTCCCCTCTTTGTTTTTTTCTTCTTTTCTTCTTGACAGCAGATCCATAAAAAG TCONS_00169338 r 5' 0 TCONS_00169338 r 5' 0 EMBV3_23643 TGCACGAATTGACAGAAAAGGATTCTGTGAAGGTGATGAGATTAACATCCATGCTGATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41006 TTAGACAGAACACCGCTCTAACACTAGCGTCCCGTGATGGCCTGTCCCTTGCACTACACA Gene GeneID:616278|ERLIN2:NM_001046576:100_cdna Constitutive 0 NULL GeneID:616278 27 GENE ERLIN2 MGC137889 ER lipid raft associated 2 EMBV3_39091 AGCGGGCGCGGATACCATCCGGGAAGGCGGGTGCTGGTCGCATAGAGTTATGTTCTGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21370 AAAGCGACTGTCATGCCCACCTCGCCCAGAACCCGAACTACCTGCGGATGTCTCACGCTT Gene GeneID:616365|LOC616365:NM_001105446:307_cdna Constitutive 0 NULL GeneID:616365 22 GENE LOC616365 MGC166041 hypothetical LOC616365 EMBV3_12741 TGACATCGGGTGACTGAGGAGACAGCATAGGGTTCTCCAGGGAAGATACTGGAGTGAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10162 ACGTGCTCAGCGACCCGCGCAAGCGCGAGATCTCCCCAAAACACCCGAGAAACGCGGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37598 AATTTGTGCTGATAAACGCTATAAACCAGTATTACCCAGTGTTAAGCCACACCGCTCACC Gene BVV0102_144841 + 0 NULL GK000016.2:63502108-63526330 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067942 TCONS_00067943 TCONS_00067946 TCONS_00067944 TCONS_00067947 1 XLOC_041561 Coding TCONS_00067942 XLOC_041561 Coding Coding XPR1 16:63299785-63507690 = TSS50967 8084 1 TCONS_00067942_5 696 15 0.961188817915961 0.00692962494904569 0.00575680244921879 0.0048829104938089 0.00381599520477777 0.00385511178567707 0.00174606857475698 0.00406441078707805 0.00399186813649186 0.0052424082241613 0.00114936499513673 0.000530776693045226 0.000469594902485775 0.000655551526657437 0.00180544536543802 0.000208386774177907 0.00239706028654939 2.28135348465076e-07 0.000469570964959348 0.00570024765738437 0.00564705960147104 0.00244865717733727 1.6399629730593e-07 0.000352293823747411 0.000482860931743185 0.00777038311624346 0.00678475797280883 0.0041769704287799 4.36020416704729e-05 0.000400364550939041 6.83772524814605e-05 XM_005217295.1 XPR1 PREDICTED: Bos taurus xenotropic and polytropic retrovirus receptor 1 (XPR1), transcript variant X1, mRNA. 0.0 1.135e+04 99.98 0.77882236516576 NM_004736.3 XPR1 Homo sapiens xenotropic and polytropic retrovirus receptor 1 (XPR1), transcript variant 1, mRNA. 0.0 5185 90.67 0.465611083621969 TCONS_00067942_5 sp|Q9UBH6|XPR1_HUMAN XPR1_HUMAN Xenotropic and polytropic retrovirus receptor 1; 0.0 1375 96.26 0.998563218390805 2 coding 0 0 0 0 0.367305753845392 0.207789129138358 -0.0828199118003734 0.118451586550665 GGAGAGGAGGAGGAAGATGGCGGGAGGGCGGCTCTGAGGAGACCTCGGCGGCGGCGGAGGAGGAGAGAAGCGCAGTGCCGCGCCGCGCCGGGGCCCATGTGGGGAGGAGTCGGAGTCGCTGTTGCCGCCGCCGCCGCCGCCTGTAACTGCTGGACCCGAGTAGGAGTGAAGGGGAGACGGCAGGATGAAGTTCGCCGAGCACCTCTCCGCGCACATCACTCCCGAGTGGAGGAAGCAATATATCCAGTATGAGGCTTTTAAGGATATGCTGTATTCAGCTCAGGACCAGGCACCTTCTGTGGAAGTTACAGATGAGGACACAGTAAAGAGATATTTTGCCAAGTTTGAAGAAAAGTTTTTCCAAACCTGTGAAAAAGAACTTGCCAAAATCAACACATTTTATTCAGAAAAGCTCGCAGAGGCTCAGCGCAGGTTTGCTACCCTTCAGAATGAGCTTCAATCATCACTGGACGCGCAGAAAGAAAGCACTGGTGTTACCACGCTGCGACAACGCAGAAAGCCAGTCTTCCACCTGTCCCATGAGGAACGTGTCCAACATAGGAATATTAAAGACCTTAAACTGGCCTTCAGCGAGTTCTACCTCAGTCTTATCCTGCTGCAGAACTATCAGAATCTGAATTTTACAGGGTTCCGAAAAATCCTTAAAAAGCATGACAAGATCCTGGAAACATCTCGTGGAGCAGATTGGCGAGTGGCTCATGTAGAAGTAGCCCCATTTTATACATGCAAGAAAATCAACCAACTCATCTCTGAAACTGAGGCTGTAGTGACCAATGAACTTGAAGATGGTGACAGACAAAAAGCTATGAAGCGTTTACGTGTTCCCCCTTTGGGAGCTGCTCAGCCTGCACCAGCATGGACTACTTTTAGAGTTGGCCTATTTTGTGGAATATTCATTGTATTGAATATTACTCTTGTGCTTGCCGCTATATTTAAACTTGAAGCAGGTAGAAATATATGGCCCTTGATAAGAATCTATCGGGGTGGCTTTCTTCTGATTGAATTCCTTTTTCTACTGGGCATCAACACGTATGGTTGGAGACAGGCTGGAGTAAATCATGTGCTCATCTTTGAACTTAATCCAAGAAGCAATTTGTCTCATCAGCATCTCTTTGAGATTGCTGGATTCCTTGGGATATTGTGGTGCCTGAGCCTTCTGGCATGCTTCTTTGCTCCAATTAGTGTCATCCCCACATATGTGTACCCACTTGCCCTTTATGGATTTATGGTTTTCTTTCTCATCAACCCCACCAAAACTTTCTATTATAAATCCCGGTTTTGGCTGCTTAAACTGCTGTTTCGAGTATTTACAGCCCCCTTCCATAAGGTAGGCTTTGCTGATTTCTGGCTGGCCGATCAGCTGAACAGCCTGTCAGTGATACTGATGGACCTGGAATATATGATCTGCTTCTACAGCTTTGAGCTCAAATGGGAGGACAGTGAGGGCCTGTTGCCAAAAGATTCACAAGAACCAGAAATTTGCCACAAATATTCATATGGTGTGCGGGCTGTTGTTCAGTGCATTCCTGCTTGGCTTCGCTTTATCCAGTGCCTGCGCCGATACCGAGACACAAAAAGAGCCTTTCCTCATTTAATTAATGCTGGGAAATACTCCACGACTTTCTTCACGGTGACATTTGCAGCCCTTTACAGCACTCACAAAGAACAACGTCACTCAGACACCATGGTGTTCTTTTATCTGTGGATCGTCTTTTGTATCATCAGTTCCTGTTATACCCTCATCTGGGATCTGAAGATGGACTGGGGTCTTTTTGATAAGAATGCAGGAGAAAACACCTTCCTCCGGGAAGAGATTGTATACCCCCAAAAAGCCTACTATTACAGTGCCATCATAGAGGATGTGATCCTGCGCTTTGCTTGGACTATCCAGATCTCAATTACCTCCATGACTTCATTGCCTCATTCTGGGGACATCATTGCTACTGTCTTTGCTCCCCTTGAGGTTTTCCGGCGATTTGTGTGGAACTTCTTCCGCCTGGAGAACGAACATCTGAATAACTGTGGTGAATTCCGTGCTGTGCGGGACATCTCTGTGGCCCCTCTGAATGCCGATGATCAGACGCTCCTAGAGCAGATGATGGACCAGGAAGATGGGGTACGGAACCGCCAGAAGAATCGGCCGTGGAAGTACAGCCAGAGCATATCCCTGCGCCGGCCTCGCCTCGCTTCTCAATCCAAGGCTCGTGACACTAAGGTATTGATAGAAGACACAGATGATGAAGCTAACACTTGAATCCTCTGAAGTCTAGATTAACATCCTTGGTTTTCCTACTCTACAATTCTTTCCTCGACCAACGCAACCTCTAGTACCTTTCCAGCCGAAAACAGAAGACATATAACACGTTTTCCGAGCTCTTCCAGATCGGATCCTATGGACTCCAAACAAGCTCACTGTGTTTCTTTTCTTTTCTTCTCGTTTAATTTTCATTTTCTATTTTTAAAACAAATATTTACTTCATTTTGCCAATCAGAGGACATTTTAAGGAACAAAAACACAGTGTCTTCTGGATTGTTTACAATCACAAGGACACAGATACCTACCAGGATGAAGAACAGGCATTGCAAGGACCCTCTGATGGGACGGTACCGAGATACCTCGGCTTCCGCTTGGCCCGGTTTTGACTGGTTGAAACCGGACATTGATTTTTAAATTTTTTGTCAGTTTATGTGGAGAATTTTTTCCTTTCCTTCATACCCAGCGCAAAAGCACTGGCCGCACTTGCAGGGAAAGTGCAACTTAGAGCAGTACCTTCATTCACGAAGCTACTTTTTAATTTGATGTAACTTTTCTTATTTTGGGGAGGGTTGCTGGGTGGGTGGGAAATATGATGTATTTGTTACATATGGTTTTCTCATTATTTATGAAACTTAACCATAAAAGAATGATATAACTCCTGTACAATGAAGGTGGTAACAGTGAAGACAGGGGAAACTAATGTTGAACAGCATTTGAGGGTTTAGTCCACAATACCTCTTTCATGAGACGACTTGCACCTGTTTGACTTTTTCTTCCTTTCTTTTTAATTTTAAGCCAAAGTTTTATTACTGATGTTTTGAGTTGCTGCTGCTTCAGAATCCTGAGCGTGTCTCCTGCAACAAAGCCTTCACAACACGCCCATACAACCAGCTGAAATTTATTGAAGAGGCCTGATACATTTTTTTAAGGAACAGATGTGGAATACATTTGCCCATATTCCAGCCGTAACTGAAGTTACGCCTTATTAAGCTTCAACATGTAGGGTAATTGAAGTACAGCCTTTACCAACTTGGGATTAGAAGGCACAGCTATTTCATAGACTCTCTACACCCTCATTGGATAGTCTTTCTTCTGGGCCCACTTACTTTAGCCAGAAGTCGATCAAATTAAAAGTCTGTCTTGGGGAAACCATGCTTTTGAGAGCATAGAACAAGTTGCCCTTCCTCTCTCACTTGACAGTGATGAAACAGATTGGCAGCCATGTCTCCCAGCAGTTTTAAAGGATGAACATTAGATTTCATGCCCTCCTATGACAGAAAAACTGCCAAAATCGGGGGGGGCCTAAACTTGGTTATACACAAAAAGCGTATTTCTTAGAAATTTCAGACTATAATGGTCTGTACACAATGCTCATTTTCACTTTTGTCTAATTCCTTTCCTATTTCCCAAGTCATCAGATAAGCCCAAAAACCCTAAAGGATTTTTCTCCCTTGAATGTGATTGGCATTAAATTTAGCATTATCATTTACTTAGTAATAAAAGCATATGATTACTGCCCCTTAGTATATCCTTTTGTTATTAGCTCTTATTCCATGCATCACAAGTCTTCACTCATCCCTGTCATAATTCCAGGAGATTAATTAAAATTCCTATTACTACCAAAATTCTACCAATTAACTAACATTTTCTTTTTAAAGGAGTTTTTTTCGTCTTTGTTCTGTCAAGCTTCCAAAATTTGGTCCCTTCCTGAATTGAGACTTTTTTCCCCTGAAAAATCACTAAGCTCTGTGGCCTTTACAGCTTTTTTTGTTTTGCCAAGCATATTCCTTGGCCCAAAACTGAAGAAGAGAAATTTAATTTTTTTTTGTTTGTTTAAATAAAATGGATAATTTCTAATAATCAGTGGTAACAATTTAGTGACCCTTAATAGATTAAAGGTTGCATTATTTATACTTGGGATTTTTTTTCTAACTACTCTGGTTTTGTACGTTAAAACTATGGGGGAAATATCACTGGTCTGTCCAGAAGGAGCAGTCATTATTACTGAGTTATATAGAAAAGTCCAGTGGACCAGTCATTTCTTGTACAAATAAAACTGATGGTACTAATGTGTATCCAGAGCAATTTGACTTGTCAACTTCATTCTCTGTTAGTAAACCTATATAATGACACACTTAAAATCTTACAGTTGACTTCTGGTATTTTAATTCCCCAGTGTTTTTACTTTAGTGTATCCTATGACCAGTTTGGTCGTTTTTCAACTATTACGATTCTTGACCCTGATCAGTATTACTTTTTCATAGATAATGCATTGTTTGAATATATTCTTTTTCTGCTGTTGGTCCTATCAGAATAGTTTGTTCAGGAATGGTAGGGCTTAGGTAACTTTCAGCTTACTTTGACAGATGCTTAAACATGTTTTTAAACACAACAGCTTTATGTTCCTCCTGAAGCTCTAAAGAGAAAAGAAGGCTTTTCCTCATCAAGAGGAAACAGTTTGGAAGACAGAATATATAATTTTTTCCTCCAGAAAAGGCAATGTGCATTTTTCTCACCTAACTTTTATATGCTCTAGTTGTGAATGCTGTGTCCTACCTAAAATTTTACTGGAGCGTCTTGTACACTGAAACTCTCAATAGAACTCCTAGGAAATGAATATCACAGAGTTATTTTAAAGGAGCAGCACTAACCAAAGGAAAAACGTCATCTGATTTTAGGTTTAGGAAGTCTAGTTTTATTTTATTTGAGAATCACTCAATTGATGGTATCAGTTAAAATACCCCCAAATGAAAGAAAAAAGTATTTTTTAAAAAGGATAAAATTTCTTTTTCATTTTGTGATAATATGGAAAGCATTGATGTGTGTAGAGAAAGTAAAAGACAAAAGCGGCTTATTTTCCATGCACAAATGTGCACCTCTAATTAAGGCTGCCTATACCTTTAAAATGGATTAATTAAGGATTTCATACTATACAGAGAGACATTAAAATGATCACAAATTGTCATTAATTAGGTTATAATAGTTATTTTTAAGATTGGAAAGAGGTCGGAAACCTATGTGCAACTTTCTTTTTCAGCATCAGCCCTTTTTCTCCTTAAAAAAGCTGCTTCATTTCAGATACAGAAGCAGTGCTGTGGGAGGAGAATGCCAATCACCCCAGCAGTAGCATGTGTGAACCCTTAGAGAAGGAAAACAGAGCCCAGCCCCTCAGATCTGTGACATCCCAGTATTCCAACAGGAGAGTTTGAAGATTTTAACTTGAGATTTTGCTAGAAGTAACTTGTTGGTATATGATATCCTTCTACCATGGTTTGACCAAAGTATATTCATGATAACTAGAGAAAGCAATTTATGCTTTCTTAACTAAGGCAAGTTAAGAATAGGAGAAAATAGTCTATTGAGTGTACAGGCATTAACAGACATTTAGTTGAAGAGAAATAAGGTAATTGTGGAGGTAGCAGAGAAGAGCAAGAGGAAGTTGGACCTTGGCAGCAGAAGCCGGGCAGTGAGGAAAGTAGGTGAGCTTGACCACATCCTTTGGGTGGTTATACTGCTGGTAGACACCTGCCTGTTTTGCTACCCTCTTTCTCCACTACTTTCCTTTACTCGGGAAATAGTTCTTTATGCCCAAAAGCAATTTTATTAGCAATGTCTAGAAAAAAAATTTTAGTCTAAGGAAAGTAATTTAGAAAATAACTATCCATGGTGTTATTTTATTCAAATATTTAGGATTCTCTGATGTGATTGCACTTTATTTGGTAAATGAATTTCAGATTATTTTCTGTAATAGTTTGCATGAAATCTTTTAGTTATTAAGAAATAGGAGCTGTACAGCATATTGAAATTTTAAAAATTAAGGTGGCTTCTCAGATTGAAAAAACTTACATTGAATCTAAGGCTTTCTCAACTACAAAATCACCGAACTTTTAACACATCTAATTTTAAAAGCCAATAATAGATATGATCTATGTCACTAAGTTAAGACAGTAAAAGTTCTAGTAGAACTTCAGGAAAAGTTAAGAGAAATCAAATTTTTGAACTTAATTCATTCCTTTTTATGATGCATCTGGCTTATTTCTTGCTTTTGATGATTAGCTGAAGCAAGGAAAGGTTAAAGAGATTTTACAAATTGCTTAAACACACATATGTTTCTGCATTTCAGGTATCAATCTTGATAGCAAATCTTAAAAGCTAACTTTCTGCATTATATTTTCAGTCTATGCAATGTCAGCACAGTCATAATGTGGTCTAGAGTTTATTATATTAGATGGTAAGAAATTTGTGCTGATAAACGCTATAAACCAGTATTACCCAGTGTTAAGCCACACCACTCACCAAATATGAAGACTTCAAAGAAGTTCGGAGCTTAATTTAAATGATATGAGAAGTTTGCCTGGGAATTGAGAGGAGCCTGCTGATTGGAATGGTTCATCATGCCTTTCTAATATGAATTGGCAAAACTGTGATATTGAGTTGCCCCTTTAAAAACAACCTTCCGGAATGTATTTGCTTGCTTACTATGGAGTATAGTGGTTATCACATTGGCCTAACACTTTGAACACACTTACTACAGAAGAGGAAGTCAGAGGGACAAGATGAGTTTCCCTGAAGAGAAGCAAATGATTATACTGCTTTTCATCTAAAGTATGCTTCCTTATAGCAGACCTTTATTTTATTACTAAAGCAAAGCCACCTTCAGTTTGTTTGTTTGTTTTGTTTTATGCCATCAACCTAAGGAGGACAATCAAATAACCAACTGTTGGCCTTGGATTCAGTGTGTCTGCTAATTACACCATCTCATCTTATATACCTTCAGACCCGTTACTTGAGTAAACGTCCACCATATCACCTTAGTTCTTCCTATGCCCTTTCCTCTGTGCCACCACAAAACAGAGGGAAGACTTAACTACCAGAAAGATGTGAACTTCTAAGAAAGAGCAAGGATTTCATCTCACTCTCCTTTTATCATTATCTCTGAAGTCCCTCCCTACAATTCCCTGATGGTCCATGCTGCAACATCAGCATGGTGGAAGTGAGAAAGATTGTGGGGAATCCCGAAAGAGTAACTGATTGTGACATTGTTATTCTTTTGAACTATAAAATTGTGAGCCACTCACACTTGCAGAAAGAGCAGAACTCTTAAGCTTTATCACATTGTGAAGATTAATATCTTACTGTTTTCCAGATTAGCACAGAAGCTTGTATCAGTGAAGAGTATTTAGGAGGGCAATAGGGTGTAAAATGTACCTGTCTTTGAACCCTCTCCCTCTTACTCATGTTTCCTTCACCCCACCCCACCCCACCACACTGTGTTGGTCAGGTGATACTATTCTATGAAACTGAGCTATAGTTGTCGAAAGTAACCATGGAATGTGATTAGTCCTCTGTGGGTGCTTCTTCCCCTGCTTCTTCTCCCTTGCTTTCTTTCTTCCTCCCTCCACTCTGGTAAATGGAAAAGGTGATGTCGAAGAATTGATGCTTGCTTGGACTCATGTTGTATCTGTGACTATGCTGTTAACTGTCTCCTTCTTCCTTCTTACATGGGTAGAATTCTTATGAAGTGTGGCGTTCCCTTCTTGAAAGTAGGTTTAATGCACAATGTGGTACTGTTTTATAGTTTCTTGATGGTTGTATAAAGCAAAAAGTTAATGTGGTTATGTGTTTTTAAAAGAAAATAAGTGATTGGTTAAAAAAAAACTGTTCTTTTTTCATTATTACAAGCCTTCACTGTTTTCCAACAGTTTACTGCCTCCTTTGTCACTGGTGAATGGTTTGTGTGACTGTGTGTTTTTCTCTCTGGGTTTCTTGGATCCTGAATATGATTCCTCTTAGGACTACTAACTTG EMBV3_38962 AGACAGACTGGAGTGGCCCTGCTGGGCTTTGTCAGCATTCAGAACAGGATTCCAGACCAT Gene BVV0102_199775 + 1 EMBV3_15220 GK000023.2:12040965-12046516 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134098 TCONS_00134091 TCONS_00134094 TCONS_00134090 TCONS_00134092 TCONS_00134099 TCONS_00134097 TCONS_00134096 TCONS_00134093 TCONS_00134100 TCONS_00134095 1 XLOC_081297 Coding TCONS_00134090 XLOC_081297 Coding Coding BTBD9 23:12043929-12125271 j TSS100032 3561 2 TCONS_00134090_1 101 4 0.956270515484196 2.05453803817211e-16 0.00029456077289829 5.3881784505539e-06 2.24655342758987e-09 9.88981816109112e-08 0.000670060943725366 0.00098472954784389 0.001128228547372 0.00169380610141652 4.00855855903664e-11 6.38072592138424e-20 2.88823434717793e-14 2.07677900399304e-06 2.56045919679554e-23 2.51367938289111e-16 8.79410453802691e-09 4.66225709934428e-06 1.20250748514518e-09 0.00136088522237179 0.000557023890254439 1.42380876632116e-88 1.09415160357357e-12 3.2156820503586e-08 4.75530415390525e-07 0.00200657019905335 6.15271834437467e-07 0.000784200858265587 1.26303689364106e-11 3.06277791333204e-17 1.96668396105354e-14 NM_001128498.1 BTBD9 Bos taurus BTB (POZ) domain containing 9 (BTBD9), mRNA. 0.0 1647 99.89 0.256950294860994 NM_001099272.1 BTBD9 Homo sapiens BTB (POZ) domain containing 9 (BTBD9), transcript 0.0 984 78.38 0.341196293176074 TCONS_00134090_1 sp|A4IFG2|BTBD9_BOVIN BTBD9_BOVIN BTB/POZ domain-containing protein 9; 2e-55 184 100.00 0.99009900990099 0 noncoding 0 0 0 0 0.052794541721555 0.686613711837823 0.0342713972521742 0.513798289253963 CAGGAAGTCTGGAATGTGAAGGAATCTGAAACATAATTAAGGTCATTGGGACATGCTAGTTATTGCTGTGGGACTGTGACGACCGGAGCTACAGCTACTATGTTGAGGTTTCCACCAACCAGCAGCAGTGGACCATGGTGGCCGACAGAACCAAAGTCTCCTGCAAGTCCTGGCAGTCGGTAACTTTTGAAAGACGCCCAGCATCCTTCATCCGAATCGTTGGAACACACAACACAGCAAACGAGGTATTCCACTGCGTCCACTTTGAGTGTCCCGAGCAGCAGAGTGCCCAGAAGGACAGCAGCGACGAGCCTGGGACAGGGGGCGCCAGCGCGGCCGGGCAGCAGCTCGACCCCCACGCCCTGCAGGCCCCCAGCGGCAGCTCCCTGCCCTCCAGCCCTGGCTCCAACTCACGCTCACCCAACCGGCAGCACCAATAAAGGAGGCGCACGTGTGGAGTGACTCGGGTGGCCAGGTGGCGCGGGAGCCGTGTCCCCCGCCCGAGCAGGGATCCCTGTGGACTCCCCCCACACCCTCCCCCTGGAGGAGCAGGCCTGGCTGCAGAAAGGGACACAGAACGGGTTTCCTCCCAAGGACACAAAGGGGCTGCTCTATTCTCCTCAATTTGTTCAAATCAGGCTGGTCTCCAGAGGGAGAGAGTGGGTCTTCAATCTTCATCAAGTCCTCCATTAACACCCTACCTCTCTAACCTGCAAGGGGCACAGAAGGAAGTAGTAGGCAGGCCCGGGTCCGCATACAGAAACGGCACGCAGACACGGGCCGCGCGGGCGTGTCGGGCCTTCCCCCAGAGGCGCCCTGAGAAAGGAGACTTCAGTGTGTTTACTTTTATGGACATTGCCCTGGCAACTAAATGGTTTTTTATTTCTTTTAGTTACTCTCCATTTGCTGAATCATAGGTATTCCAGATCTTTTTGAAAGGCTCAAACCACAAATCACTTGTTTCAATCCCTTTTGATGCTGTAATTTTCCTTCTTTAGTTTTGAACGGTGGAGTGTGGGGTAGAGCGGAAAAATAGCGTGCACGTCTCCCTAGGGAGGGATGGAGGCAGGGCTTCGTGGTCTGACAAGGAAAATCCTTTGAGGAAGTTCAACAAAATACACAATGAACAAATCAATCTGCGGACACTGGAGTTAATAATCACTCAAAGTGCCAGGTTATTAACCTGTCATTCCTGAAATGTATCCCACCTTTAAGCTTGGGAGGCTGACAAGGAAACAGTGACTATGCCACCAGCTAATTGAATGCTCAGAAGTGTGCACAGATAAACCCGCCCCAGCTAATGTAAGGCTCACAAGTGTGCACAGATAAGCCTGCCCCAGCTTCTGGCTAGGCTGGGCCCGCCCTGTTTGCCACAGGTTAGTGGAGGTGTGTGGAGACGGCCATCCTGCTGGTCAGGGTCTGGAATACAAGAGGGGCCTCTCCCGCCCGCTGGTGATCAGTGGTTGCTGCTTTTCCCCCAGACCATAATACTCAGCTAGGGATTGGGGGGATGGGGGGGGACAGTTCTAAGCAGCTTTCCTCTTAATCCTCACCGAGACCATCTAATCTGACAGTTGTCACTTGATCTGGCCTGCGTGTCTGAGTGATGTCCGCCCAGCGCTAACCGCCCTCTGAGAACCCCTCCCCAGCTTCTCCCGGTGGCTGGCTGCGGCCATCAGGCCCTCCGCGCACCCTGCCTAAGGCAGGGTGGGCACTTTCTTTCTGTCTTAAGCACACATTGGTCATAGGTGTGCAAAGAGCCAGTGGGTCAGCTCTTTCCTCCCAGTGTTACATAGATGTGAGTGGCTTATCGGTCCCGGGGTAGTGTCGCTTCAAGCTGCATGAATAAACCAGATGGTTGTCTTTCTGCGGGTCCCCCTCAGTGCCCTTCACTCTGATCTCTGTCTGTATCCCCCCGTGTGGGGTGAGTGGAACCCCTGGGTTGAGGGGCAGCTTTTCACCGTAGGAGGAGGGCTCTGGTAACAAATGGAGCCTCTTGCTTGCTCACCGTGGGTGGGTGACCACCTCCCTCAGCGTCCAGCCCCCGGTTGCCAATTAGAGCCTGGCATTCTTGTCCACTCAGCACCTCCTCAGGCGGCGCATTCACTGCTGACAGGGAAACAGGAGGAGCAGGGGACTCGGGCTCGGGCAAGGTTCAAATCCTTTGCAGGTAGCACCGGTTCACGGGCTTAATCACGGAGTCACCTGTCCAGAGAGGCGTCCCAGCCTGGAGGCCGGCACTGCTGACCTGGGGAAGGTCCAGAGCCTTCCAAGCCGTGGCCCTGCAGCATCCCTCTGCGTCCAAGCACTGGGGACGAATGCCACCTGGCTACTCAGCTGCCAACAGGGAGGCACGAACCGTGCCTGGCTGGCCAGCGGCTCAGCCCTTCTCTCGTCCCCGGTGAATTCTCTCCACCCTGAAGTCTGTCTGGAGAACAGAACTGTCTCCCTGCTTCTGCAGCACTTCACTCGCCCTTGTTATCACGTAAAGGGAAGGAAGGGACGGTGATGCCACCCCTCCCCGGCAGCTGCCTCCCGGGCCCGATGGTCTGGAATCCTGTTCTGAATGCTGACAAAGCCCAGCAGGGCCACTCCAGTCTGTCTCCTGCTACGAGGCAGGGGCTCCGCCTTCCCTGATGAGCCTTCTGGTTTGGGGAATGGGGGGCAGTCAACAAGTCCGTAGGGGACTGATATCTCCAGAGCCCTGGCCAGTCCTACAGAGGAGTCCCCCCACCCCCGACCCCGCCGGGAACCACATGGACCAAAATGGCCCCCAAACTCCGAGAAACCAAAGGAGCCGAGAGAGAGTGCAGGGGCTGAGACCCGGCTCCAGGGAACCCCACCAGACCCCTCCGCCCAGCAGCGGGTAGAGGCCGAGTCCCTGGGGAGCTGTGGGCACCAGGCTGCGGGTTTGGCCAGGCTGGGAGGGGGGCAGCGGCAGAGGAGGGCCGGTGGCTCCCCACACCCCGTGAGGAGGCAGCTGCATGGAGGGGGGTTGAGGAGGTTGGGGCAGAGGGACAGAGGGGTGCTTACACCACCTTTGTAACCAGGTCACGAGATAGAACAAGCGGAGCCTTTTGCCCTTCACTTTAGATAAAGCTCTGTGCAGAGTAAGAGGCAGACTCCTTTGGGGGAAAGCGTTCAGTCACCTCCTGGAGCTCCTTGGAGGGCTGGCTCTGAGCACGGCGGGCGGGGCACGTGCCACATGAGCCCCATTCAAGGCCAGCTCAGGTAAGGCCGGGTGCCAGGCACTCAGAACTTGAAACACACACACTTGTCTTCCCGTATTCTGTTTTTTTCCGATGCTCTTCTGATTTTAGTTAGAGCCATGAGCCCGTGATGGATATGGGACTCTTCTCAATTGCTCTTTAAATTATCACTTTTTAAATCTTAGTAAATAAAGTGTGTTTATTCCTGACAAATACATTAAAAGTGTGTTATCCCTAGAAGAGTTAGGAAAAAGAGAATTATTTTCAGCGAGAGTGGGATGTGTTTGTTAGACGGCGTCCTTGGCCAAGAAGAAAGAGCTTCTGAATTGTGCAAAAACTGCTCAGGAGTTAC EMBV3_03147 ACAACCTGGACAAGCTCCACGCGCTGGCGAGTGCCCTGCTGGAAAAGGAAGTGATCAACT Gene GeneID:515269|SPG7:NM_001102022:246_cdna Constitutive 1 NULL GeneID:515269 18 GENE SPG7 MGC159511 spastic paraplegia 7 (pure and complicated autosomal recessive) EMBV3_22329 CTTCAGATCGACTACGCATCGCCTGGCATGGTGGTTTTCAAGTAGTGGGCACCCAATAAA Gene GeneID:282433|GUCY1B3:NM_174641:93_cdna Constitutive 2 NULL GeneID:282433 17 GENE GUCY1B3 GUCY1B1 guanylate cyclase 1, soluble, beta 3 EMBV3_22019 TCAAGTTCCCGCAGGACCAGGAAACTAAGACCAAGTCAGACCAGCTTTCTTAAGGCACCG Gene BVV0102_315086 - 1 EMBV3_13362 GK000012.2:81161578-81261654 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20800 GGACAACTCTGGATATGGGCGAACTAAGAGCCTGAAGAATAAGTAGTAAGAACATCAATC Variant GeneID:616397|ZMAT4:NM_001076943:103_cdna 707^803 3 EMBV3_31009 GeneID:616397 27 GENE ZMAT4 NULL zinc finger, matrin type 4 EMBV3_09515 GATCCCCCCAAGAGCAGATCATTTTGGCACCGTCTCTGACTAGGGTTGACATGGAGATGA Gene GeneID:521454|SLC12A8:XM_002684815:230_cdna Constitutive 1 NULL GeneID:521454 1 GENE SLC12A8 NULL solute carrier family 12 (potassium/chloride transporters), member 8 EMBV3_30945 GCTGCATTCTTCACCCTCTTTCGGGGCCTGATGCTGGTGAATATGTTCTATGTGCTGCCT Variant GeneID:515889|TM6SF2:XM_002688520:90_cdna 817^909 2 EMBV3_12536 GeneID:515889 7 GENE TM6SF2 NULL transmembrane 6 superfamily member 2 EMBV3_22120 CTTAGCGGAGATCCTGCAAGCCAACGACAACCTTACCCAGGTCATCAACCTGTACAAGCA Gene GeneID:534634|GGA1:NM_001035408:82_cdna Constitutive 0 NULL GeneID:534634 5 GENE GGA1 NULL golgi associated, gamma adaptin ear containing, ARF binding protein 1 EMBV3_19126 GGAGAGGCGAGAGCACGGTCTAGAGCTGGAACGCCGACCTCTCGGGAGCCTCGCTGCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32190 AGAAGCTATTCACCATTGAGCGACTGCATTTGCCTCCAGACTTGTCAGACACTGTGAGCC Gene GeneID:614139|ELP4:NM_001038684:53_cdna Constitutive 1 NULL GeneID:614139 15 GENE ELP4 MGC133896 elongation protein 4 homolog (S. cerevisiae) EMBV3_37667 GGGAAGTGAATATTAGTGGCTGGTTGGCTATTCCAGAGACATGTGCTTTATGAGGACGAA Gene BVT0102_147066 - 1 EMBV3_13562 GK000013.2:77005010-77351833 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044052 TCONS_00044053 TCONS_00044055 TCONS_00044054 TCONS_00044056 TCONS_00044057 1 XLOC_026107 Coding TCONS_00044053 XLOC_026107 Coding Coding - 13:77347388-77352368 - TSS32458 2437 1 TCONS_00044053_6 128 3 0.511146816629845 0.0002119766062477 0.000464762783418995 0.000441075650478471 6.87358578992453e-05 0.000411703618169531 0.00025655552423417 0.000130038804980427 0.000558095202604854 6.90752279517505e-05 0 2.12633606993724e-12 4.39592684963506e-12 4.27881225091818e-05 9.19029536743807e-25 2.91534073667152e-05 0 0 0 0.000288692588997517 0.00068452298503095 0.000389883427154613 0 0 0 7.47274261300879e-05 8.01648213860041e-05 0.000139672604387605 0 0 0 NM_001192185.1 KIF11 Bos taurus kinesin family member 11 (KIF11), mRNA. 0.0 677 94.05 0.174394747640542 NM_004523.3 KIF11 Homo sapiens kinesin family member 11 (KIF11), mRNA. 5e-149 533 86.73 0.174394747640542 TCONS_00044053_6 sp|P52732|KIF11_HUMAN KIF11_HUMAN Kinesin-like protein KIF11; 5e-47 165 90.00 0.6953125 1 noncoding 1 1 1 1 -0.202488630292327 0.118418289622467 0.0335323763082125 0.506838753328755 GCTCCCCAGCTCTCTGGGAGGGACAGCAAATCAGGCTTCTGGGAGTCTCTGTAGCTAGGAATCCTGTCTCAGTTACACTGTGGAGCTCTGCAGTGTTAACTTGAGCACTGGATTCCAGCACTTTGGTCCCAGCTGTCTCTGGAGACAAGTCATGATGCCCCTATCATCAGCGCAGAGTCGTCTCTAACCCTGCTTCTCTGCATCACCAGCTTTCAGGGAAGCCTCCACGTGCCGACTGGCCAAGCCCTGGTCAGGTCCTTTATTTTCTATTCTCTCAGATTGGGCAAAGACCACAGCTATTCTGTTCCACGGTCTCCACCGTCAGCACAGAGCCTGGATTAAGGCCAGGTGCCAGGGAACGCTCAGGAAATATTTGATGAAAAAGGACACAGAAGAGCTAATGAAGATGAGGAGTTGAGCTGCAGGATTCCCAATTCTCATCTGACTCGATGAGAATTCTAAGACTTGCAGGACCAGCACATGTAGATCCAAAAGGGAAGCCACTTGGAAAGATCTGGAAGCTGGACGAAATAACCAACCTTCTTGTTTCCTCTTATGTTTAGACTTCAATCCAACCATCCATCCCCCAGGAGACGTTCATCAGCTTTTCTGGAAGAAAAAGTTGCCTCCTGCTTACTGTCGGATATCCTCAAAGTGCCAGTAGAAGATTAGTTAATGGAAAGGCTCGGATCTTAGTGCAGCTGATCCCTAGTGTTTGGCACTAGGGATCAGTTTCATGGAAGACAATTTTTCCACAGACCCGGTTGGGAGGATGGTTTTGGGGCGATTCAAGTACGTAACACTTACTGTACACTTCATTATTATTACATCAGCTCCACCTTAGATTATCAGGCGTCAGATCCCAGAGGTTGGGGACCCCGGTTTTAGAGAATATTGGGCTGTATCTGTCACTCCATGGAGATCCTCATTTCTCAATACAGAGGAGCTATGACCCGGAGCAGAAAAACTGAGAACCTGCAAATGTAAAACACACTGGGAGCTTAGGTAGAGGCATCTGAATTAGATCAAATTTTCCCCCCGGAGTCCAATTTGGAGGCATTAATAGTCAGCCCAGTTTTTTAATGATCTCAAATATTTGGTTAAAGAAATGCTATAAATGCCTGTATTAAATCCAGCTGCTGTCATATTTAAAAAATGTCAGCCGGTTGTTTATTCCTATGGCTTGCTCAGAAAGCAACAAAAGCTGGTGACCTATTTTGTAAGAAACTGCACAGAAAGGAACAATATTAAATTAGGTGCCTGTCTATTCCTCCAAGCTACCCCATATTCTTTGCCTCACACTGAAATTCTTTCCCCGTTTATCCACATTGTTTCTTTCTAAGTAAAACTTATTACACAAATTCCCCAGGGCATTTTTTTCCCTTTTCTTTTTCTTTTGACTCTGGTTAAATAAACTATTGATTTTGTTTTCAAGATAATTTAAGGAGGGAGTATAGTTCCGATTTGATAAGTATAACCTTAATGCATTCAGAGTAAACACATTTTAGGGGTTCAATTAAGGCTTAAAAAAATCAAATTGACCAGATGATTGACTGTCATGGGGATGTGGAAGAGCATGGAGCTGCATGGTATTAATAACACAGAGACAAACTAGCTAAAGGGAAGTGAATATTAGTGGCTGGTTGGCTATTCCAGAGACATGTGCTTTATGAGGATGAATTAATACTCAGTTTCCCAGAAGGAAAAAAAAAAAACTAATTTTTGAGAAGCCAACAGTGCTTGTTCTAAATGGGCCAAGACAGACTCCGGGTTTCCAACGGTGTCACCGTTCAAGCATCTGAGCGCCCTGATTCACGTCGCCTCTGACATCAGACTGCCAAAGGCCAGTGGGCACATGGGCCAGAACTGCCTGTTGAAAGCAGCCCGTCTTCTCTTGCTCACATGAGGAAATATCCAGCATCCACCCACTGGTTGCTCTATAAATTGTGCTGTAGCCTCAGACCGAAAGCATTAAAATTGGGTCTCAACGTTTGCATGGAAACAGAAATAGGCAGTGAGAACATTGGCCATTCTGGAGCAGTTGACAAGAGACCTCGGAAAGCTGGAAATATCAATCAGTCCCTGTTGACTCTGGGAAGGATTATTACTGCTCTTGTAGAAAGAACACCTCATGTTCCTTATCGAGAATCTAAACAGACTAGAATCCTCCAGGACTCTCTTGGGGGATGTACAAGAACATCTATCATGGCAACAGTTTCTTCTGCATCTCTCAACCTGGAGGAGACTCTGAGTACATTGGAATATGCTCATAGAGCAAAGAAAGCCTGAGGTTAACCAGAAACTCACCAAGAAAGCTCTGATTAAGGAATATACAGAAGAGATAGAGCATCTGAAACGGGATCTTGCTGCAACTCGTGAAAAAAATGGAGTGTACATTTCTGAAGAAAATGTTAGAGCTATGAGTGGAAAACTAAGT TCONS_00046385 r 3' 212275 TCONS_00046385 r 3' 217254 EMBV3_35319 CTTCTACAAAGGGTTCATGCCCTCCTTTCTCCGCTTGGGATCCTGGAACGTGGTGATGTT Gene GeneID:281562|UCP2:NM_001033611:46_cdna Constitutive 1 NULL GeneID:281562 15 GENE UCP2 MGC127535 uncoupling protein 2 (mitochondrial, proton carrier) EMBV3_19443 AGGTCCTTCGCAACATGGTACACTGTGCAGACCTGAGTAACCCCACCAAGTCCCTGGAAT Gene GeneID:100124505|PDE4B:NM_001102546:2_cdna UTR3_Alt 2 NULL GeneID:100124505 3 GENE PDE4B MGC152127 MGC154987 phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila) EMBV3_36093 CATCTGGGGCAGAAGCACTCAATTTGATTACAAAGGCCAGGCCAACATCTGCGTACCTTG Gene GeneID:281740|CYP19A1:NM_174305:13_cdna Constitutive 2 NULL GeneID:281740 10 GENE CYP19A1 CYP19P1 cytochrome P450, family 19, subfamily A, polypeptide 1 EMBV3_27558 TTCCAGGAAATCTTCCCGACTCAGGGATCGAACCCCCAAGTCTCTTATGTCTCCAGCATT Gene BVT0102_406643 + 0 NULL GK000009.2:87475897-87759387 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242345 1 XLOC_149009 NonCoding TCONS_00242345 XLOC_149009 NonCoding NonCoding - 9:87477585-87478447 - TSS182023 862 2 TCONS_00242345_3 82 0.261020881670534 1 0 0 1.16571159511505e-05 0 0 0 0.000178438064749096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000237029172707366 0 0 0 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 3e-57 226 83.04 0.25754060324826 0 noncoding 0 0 0 0 -0.272432362316021 0.300674172198015 -0.0823503874757863 0.294829567736384 TTTTGAGTATCTACCAAACTAAAACTCTAAAATGGTGAGACAGCCAGAGTCCATCTGCTGAGAAATAAGGCACATTTAGCCCCACTCGGTGCCACCTGCCACCTGAAGTCAGCACAGGAGCTGCCCTCTGTGGCTGTGCTTAGGAGTTGGTGCTGTAAGATCCTCTTCTCCAGAGGGAGGCCCTTTGGTTACCAAACACTTCAGTCCTCAGAGACTGGTGTCAAAATAAATATTTGAAATCTTTCTCTCTACTCAAGGGACCTGCTGTGCGTGCTAAGTTAATTCAGTTGCGTCATGTCTGACTCTTTACAACCCCATGGACTGCAGCCCACCAGAGTCCTCTGTCCATGGGGTTCTCCAGGCAAGAATACTGGAGTGGGTCACCATGCTCTCTTCCAGGAAATCTTCCCGACTCAGGGATCGAACCCCCAAGTCTCTTATGTCTCCAGCATTGGCAGGCGGTTCTTTACCACTAGCGCTACCTGGGAAGCCCTCTCAAAGGACACAGTGGTTCTTGTTTCCGGATAAACAGAGTCAGACCATGTTTGCCCATCTCAAATTATAGTTTTATTTTTTTTAAAGGCAAAATGAAAAGTCATCTTCTGCTTCCTGTGAGATGTTTCAGGTGGACCCATGTCAAAAAATAAAGTCAAATGCGGCTCATAAAACAAGTTGAAGCTGAGTGCAGACATGCCCCTGGAAAACCAGAACTAGAGGACAACGAGGCCCTGATCACTCACAGGCCTCCTCGCTCCCTGACTGTTCCACTCACCCAAGAATTCCTTTTTGGCTAGGGCAGGATTGGCTCACAGCTCGGGCACTGCCAATTCCCAGGGAGCACCCAGGCCCACAGATGTTCATG TCONS_00236183 . 3' 1778 TCONS_00236183 . 3' 2639 EMBV3_01709 TCCCGGGAGGCCCGAGCCAAGGTCATTGCGGCTGAGACGGGCCCAAACCAGCCCTCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20326 GATGTCCCCCCATCTATCCAAACAGAATTTGCCGTCCAAGGTGACTTTCAGTATGGTCCC Gene GeneID:540367|FAM113B:NM_001101207:87_cdna Constitutive 0 NULL GeneID:540367 5 GENE FAM113B NULL Protein FAM113B EMBV3_28052 GCTCTACGTCTTCTCACCGAACGACAAGGTGATTAAGAAGATGATCGCGGAGACCTCCAG Gene GeneID:281617|ALDH3A1:NM_001166513:424_cdna Constitutive 0 NULL GeneID:281617 19 GENE ALDH3A1 ALDH3 aldehyde dehydrogenase 3 family, memberA1 EMBV3_17920 CCCAATGATGTCACCTGTGGAGGGTGACAAACCCCAGTCCTCTCCACCATTCTGTTTTAA Gene GeneID:783024|LOC783024:XM_002697233:404_cdna Constitutive 0 NULL GeneID:783024 23 GENE LOC783024 NULL hypothetical LOC783024 EMBV3_10821 GTGGTTAGGACTCAGTGCTTTCACTACTGTGGGCCTGGGTTTTGATTCCTCATCAAGAAA Gene BVT0102_058711 - 1 EMBV3_27012 GK000001.2:121435259-121864959 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29317 CCAGGGACAGTAGAGGCCATAGCGACGTGTATATTTCAGAGCATGTTATGCCTTATGCTG Gene GeneID:524212|GRIN2A:XM_002697892:477_cdna Constitutive 0 NULL GeneID:524212 25 GENE GRIN2A NULL glutamate receptor, ionotropic, N-methyl D-aspartate 2A EMBV3_35255 GCCACTCTGACTGAATTGAAAACGGTCCTGAAGAGCTTCCTAAGTAAAGGCCAGGTTTTG Gene GeneID:281640|ATP5O:NM_174244:10_cdna Constitutive 0 NULL GeneID:281640 1 GENE ATP5O OSCP ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit EMBV3_41753 CCTTGCAGGGTCTCTCATGGTGAGAGATATGAAGTCAATAAGTTCCAAGTTTGTCAATAG Gene BVV0102_097674 + 0 NULL GK000015.2:62799791-62869596 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32023 CTACACGGTCCCGAGCGGACGGGCAGGCTGGCCCAGCAGCCCCGGACCCGGGCTGGACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28778 TTCGTATGAAGTGTGGACGGTGTCCTGAGGATCAGCTCAGGGTGCTGCGAGCTGGGGTTC Gene BVV0102_364085 + 0 NULL GK000013.2:46630520-46639763 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31084 CGCATCTGGATAGCAACACTGAGCCAGGACTTACATTGGGAGGCTATTTCTGCCCCCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00985 GATCCTGTACGTGACGGAGAATTACCTGTGCTTCGAAAGCTCCAAGTCCGGCTCTTCCAA Gene GeneID:613430|GRAMD4:NM_001102263:49_cdna Constitutive 0 NULL GeneID:613430 5 GENE GRAMD4 DIP MGC165967 GRAM domain containing 4 EMBV3_09072 GCAGGCATGCTGAGGTGATGAAGAAAATCATTGAGACTGTTGCAGAAGGAGGGGGAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18126 TGAGCACTTGGACCACGCTCTGCTCTACGGGCCGGGCCTGGCTGTACCTGGCCCTCAATG Variant GeneID:515552|PLEKHM2:XM_002694198:702_cdna 225^334 2 EMBV3_15051 GeneID:515552 16 GENE PLEKHM2 NULL pleckstrin homology domain containing, family M (with RUN domain) member 2 EMBV3_29767 TCACTTTTGACTGACCCTGCCAAGTGCCCTCCCCTTTGAAGTGACCCTCCTATTACCCTC Gene GeneID:518646|GPA33:NM_001035330:20_cdna Constitutive 0 NULL GeneID:518646 3 GENE GPA33 MGC127694 glycoprotein A33 (transmembrane) EMBV3_35034 CTTCCGCAAGCTCAACGCCTTCGGCAACGCCTTCCTCAACAGTTGGATTTTTGATCTGTT Gene GeneID:100299291|LOC100299291:XM_002692577:283_cdna Constitutive 0 NULL GeneID:100299291 14 GENE LOC100299291 NULL similar to EH-domain containing 1 EMBV3_11245 CTCTGATGGTAAGGGTGTCTTTGGTCTGTGAGAATATTCAAGGGCCCTGCTAACCACTCC Gene BVV0102_078320 + 0 NULL GK000007.2:34399910-34536470 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33693 GAGGGGTCAAACAGGATGAAAGCATACATTGTTCACAAGTCACCACGTTAGGTCCACCTG Gene BVV0102_099822 - 1 EMBV3_26258 GK000022.2:29396302-29987707 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248073 TCONS_00151325 TCONS_00151323 TCONS_00151324 2 XLOC_151482 XLOC_092086 Coding TCONS_00248073 XLOC_151482 Coding Coding LOC100847679 X:117095903-117098021 = TSS185592 2118 2 TCONS_00248073_3 223 0.991029272898961 1 0 0 0 0 0 0 0 0 0 3.72526876884818e-06 0.000104092642922766 4.87272784618559e-05 5.20537914894378e-05 4.74150544872645e-06 2.73918841187266e-05 1.0423934800077e-05 0.0053953792996879 0.0015514018579076 0.00221431099700138 0 0 1.43329668784965e-06 0.00185254093350888 0.00102331036571276 0.00341927395040215 0 0 0 0.000167039752547253 0.000163500846256606 0.000545965247964128 XR_139745.2 LOC100847679 PREDICTED: Bos taurus uncharacterized LOC100847679 (LOC100847679), 0.0 3820 100.00 0.999527856468366 TCONS_00248073_5 sp|P61567|ENK12_HUMAN ENK12_HUMAN HERV-K_1q22 provirus ancestral Env polyprotein; 3e-07 50.4 24.77 0.596685082872928 1 coding ATGTCTCAGCCCCTCGGATACCGGACTACACGGCTGCCGCAACCCCGCAAGAGGAAGGGGCCTCCTCTGCCTCCGCTTCCCCAGCCAGCATGGGAGACGCTGCCGACATCAAGACAATTGACTTCAGGAACCTTGAATGAGCAAGGAACAGATCCACCCACCAAACAGATGTCTCAGCTTCACATATGGGACACTACTCCCCCTGATTCCCTGCGCTGCAGAAACATCCCAGGCCGCCAAGCTCAGGTGACCTGGAATGCCCCCATACCCACTTGTGAACAAATAAAAACACTCTGTCACCAGGCACGAGGAATGACTTCCTTGCAGGGATCTCCAGATTCTCCTGAGAAAGTTTTTATTGCCATGCTTGCCTTGCTTTCCTGCCAGGTAAGCGCCTCTCCTATTTCAGGTAAGTATTGGGCATATCTCCCAGATCCTCCAACTTTCCAGGTTGTTTCCTGGAATAATGAGCCTATACGGCTCAACACAGACCAACCTCAGCTTTTGGGAGGATTCTATACTTCTTACACTAAAGATAAATATCCTATTAATTTTAATCATACTTTCTGGGGATTAATAGACGATCTTCCTGTTTGCTTTAACTTCCCCAGTAATCCAAAGAGTTTTATAACACCCACTAAAGAAGGTGCATCGGGGCCTCTACAAAAATAATTATAACATATTCCTCAAAAATAGATTCCCAGTCTTTACATCATTGGGTAGTTTGGGTATTAGTGGCCCGCTTGCCTGGGATCCGTGACCCTGCGCTTTACACCCCCTCCCGGTTATCCAAAGTGTTATAAGGTTGCTCCTTCAGATGAAGTGTGGAAGACCATAGATGGCCGTACTGGGTATCTGACTTGGACAACTTGTACTTATAAGTTCAAGGATTGATTATAGGATACCAGGCGGTGGGAATTATACTATTCAGGACTGGAGTAACCCGAATCCGGGTGAGGATCCATTGATCAAGATAACATTCAAGGCAGATTTGAGAATTGGAATAGGATTCCTCTTCCTTGGCCTACGCAAGCCACTAGATGGCATATTAACCAATTTGTTCCTCCTATGCTGTCTTATACAACTAAAAGCAAAACCTATTGGCAACCTGAGATTTGGAGAGCCCTTGCTGCTACTGCCCCCGTTTCTTCATCTCGCCCAGATAACGATTCCACTTATTCTGTTTTAGTTTGTTTACCCTCGCCTTATGTTTTCCTTTTTACTAATGACTCCAACAAACTTAATGTACGCATAAATTATTCAGGTGGACCTAACGTGGTAACTTGTGAACAATGTATGCTTTCATCCTGTTTGACCCCTCAATATAATATTTGCTCTTTTGTTGTGTTGCAACGCCCACCCTATCTCATTATACCTGTGACCGTGACCTCCCACTGGTATGACAATTACGGTCTCGCTGTGCTACAACAACTACAGGATTTAATGTGATCGCGGCGGTTTGTGGGCTTACTTATTTTAGGAATATCAGCTTTAATAGCAGCAATTAGTTCTGTTACTGCAGCAGCAATATCATTGACTCAACAAGTGCATACTGCCCAATATGTTGATACCATGTCTAAAAATGTTTCTTTAACTCTAGCAACTCAGGAAGCTACAGATAGGAAATTAGAGATGAGAGTAGATGCCTTAGAAGAGGCAATTATGCATACTGGGGCTGAGTTACAGGCTTTAAAGGTGAAGATGGCTTTGATATGCCAAGCGGATTACAAGTGGATATGCATGACATCTTTGACGGTAAATGAGACAGATTATGAGTGGGAAAAGATTAAAAATCATATCTCAGGTGTTTGGAATAGTTCTGATATTGGCCTGGACTTAGGGAAAATTCATAATCAAATACAGACCTTGGAACACTCTCGAATGGATTTTACCGTCACCGGTGGTGACTTTTTTCACACTTTCTCTAACTTTATTCCTGGAAAAAATATTCTGTCTAATATCCCTAGTTATGCTGTCATTGGTGCTCTAATCCTACTTCTCATAATTATTCTTCCTTGTATTGTCCGGATTCTTCAGCAGAGCATTTGGAAGCTCGCGACTGAGCTGCATCTGGCTGCTTTAAGAAATAAAAGGGGGAGATGTTGGAGGCCAGCGTGA EMBV3_33646 GCCTTGGTGGACTAGAACAACATCGTGCTGCCCAAAGGACTAACCTATGCAAACCAGTTC Gene BVV0102_232573 + 0 NULL GK000013.2:22015329-22381840 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044766 TCONS_00044769 TCONS_00044775 TCONS_00044768 TCONS_00044770 TCONS_00044778 TCONS_00044765 TCONS_00044767 TCONS_00044774 TCONS_00044771 TCONS_00044773 TCONS_00044776 TCONS_00044777 TCONS_00044772 1 XLOC_026262 Coding TCONS_00044773 XLOC_026262 Coding Coding NEBL 13:22376850-22577225 j TSS32825 6697 4 TCONS_00044773_3 103 0.00821263252202479 5 0.966602453412119 0.000863801272510975 0.000487162934238849 0.000663321164632778 0.000415669446893815 0.000699119439591008 0.000327076090665001 8.13193696800467e-06 0.000130261786160891 0.000503895761389527 0.000145433857926786 9.31469180135168e-21 3.24798885384482e-10 5.82044707344613e-05 0.000242464869597991 0.000309411942976447 1.07772186862808e-18 5.18913763562721e-11 2.29880009909144e-117 0.000976917373585948 0.000270785134000468 0.000407415847078584 7.3646029770229e-17 6.03061024841816e-16 1.816915684367e-11 0.000600353696766402 0.000768548896466296 0.000445416705408181 1.32601609557826e-16 3.71685361425539e-10 9.72378931323207e-16 XM_005214192.1 NEBL PREDICTED: Bos taurus nebulette (NEBL), transcript variant X2, 0.0 1.149e+04 100.00 0.950724204867851 NM_213569.2 NEBL Homo sapiens nebulette (NEBL), transcript variant 2, mRNA. 0.0 5304 79.05 0.949529640137375 TCONS_00044773_3 sp|O76041|NEBL_HUMAN NEBL_HUMAN Nebulette; 2e-61 204 93.00 0.961165048543689 3 coding 0 0 0 0 NA NA NA NA TGGTGTGCTGCAGTCCATGGGGTTCCAAAGAGTTGGGCACGACTGAGTGACTGAACAACATAAGATGATTAAAAAAAAAAAAAACTTAAATAGATACCAGCTCTTGCTAACAAAAGCAGCAGGAAGAGTTGGGTCCTGCGGCAGGACTTGCTAAGCCTCTGACCAAAGCTGTTTCTAGGTTTCAGGGTGATGCTAGCAGTGCAGAGATCCTCGTCCTCAAGGTCAAGTACAAAAGAGATTTTGAAGAAAGCAAAGGGAGGGGCTTCAGCATCGTTACAGACACTCCTGAACTACAGAGGCTGAAGAGGACTCAGGAACAAATCAGTAACGTGAAATATCATGAAGATTTTGAAAAGACAAAGGGAAGGGGCTTTACTCCTGTTGTGGATGACCCTGTGACAGAGCGAGTGAGAAGGAACACCCAGGTCGTCAGCGATGCTGCCTATAAAGGTGTCCATCCTCACATCGTGGAGATGGACAGGAGACCTGGAATCATTGTTGCGCCTGTTCTTCCTGGAGCCTACCAGCAAAGCCATTCTCAAGGCTATGGGTACATGCACCAGACCAGCCTGTCATCTGTGAGGTCAATGCAGCATTCACCAAATCTAAGGACCTACCGAGCCATGTACGATTACAGTGCCCAGGATGAAGATGAAGTCTCCTTCAGAGATGGGGACTACATCGTCAATGTGCAGCCCATTGACGACGGCTGGATGTACGGCACGGTGCAGAGAACTGGAAAAACCGGAATGCTTCCAGCGAATTACATTGAGTTTGTTAATTAATCATTTCTCCCTGCCCTTTGAGCTTTGTTCTAATGTATACTAAACCCAATCTTTTTAAAAGATAGAAGATACTTTTAAGACAACTTGGCAGTTATTTTACAATAATCTATCCTTCCTTTGACAATTAGACATGCAGGAAGAAGGAATGACTTCTGGGCTGAAAAACAGCAGCATATTTGGTAATTGGTATAAACAAATAATTAGGTCTGGAGACCTGGTGCTGCTCGTTGTGGTAATGGTTTCCTTTGATTGGCTATTGAACCCTTCTGGGAAAACATATTTTTGTAAACTTTAATAGAGATGTTGATTGTCCCTTAAATGTCACAAATATATGAAACTTCTTAGCTGTCACTTTGGAATCACCAGAAGCCAGTCCTCTTAATTCAATAACACAGCTGATAATTTAAAAACCATTTTAGCTTTCGAGTCACAAGGCAATTTCCAATTCAAGTGAAAATTGCCTAAATATAATAAATGTAAGCAGTGGAAGAATGACAGTTCTGTTAAAATTATATTGACTGGTGGCCTTAGGGATCTAGAAACTTTCAATGAACAAAGAAATTTCCTTGTTCCTTGGGCCGACTTGGGTCTGTTTATTTCTCATTTGTACTGAAGCATATGCTATTCTCCATTTACATTCTATGAACCTAAGGACACGCTTGGCTCCATAGAATGTCAGGACCAAATAACTTCACAGCTGCTCTGCAAAGGGCAAAATTTAAGGTCATCTATGTTATTTCCCTAATACTAATAGCCTTTACCCTGTTGCATGTCATGTAGGTTCAAGCTTCTGTAACATAGGCAGCTGCACTGCCCTGTTCCTGTTATTCAAACAAAAAGTGTGGCCGATACCTAAAAGCCCTACCCTCTAGATGCCAGCTCAGCAGACAAGCATAACTTGAGAAGTTGCTTGAGATTCTCCTGCCGCATTGCACTCTAGTTTTGAAGGATTTACACCTTAGAACATAGATGTATACGCTAGCAAATAAGTGATTTAGGCATTTATTGAACAGCTTCCATTAACTTAATGCCACTGTTGACTTAAAAGTTAAGAAAACTTCCTAGAAGCCAGTGACAAAGCTGGAATATGAAGTGTGCTGGGAGAAACCAATCAACAAAAGATTGCCAGCTGCACACACAGAGAGACAGGTGATCTGGTTTCTTATTTGGGAAAACACTATTCAGATTCTGGGATGGAAATCTAGCTACTGAAATTGCTTAATGAAAAGACTTCCTTCCCACTTTCTGGATTTTATTTTCTAAATCACATTTGGAAGTGAGAGGGGGATGTCACCAGAGATTTGACAAGTTGTTCACTAAAAAAGAAATTGTTGTCACATTTTAATTTTCAACTGAGTGACTTTGCAGGCTCTTGCTGGATTCACAGGCATGACCATCACATCACGAAGTTTTTACCTGGAGTCCACAATCAAGATCACTGGAGAGATTCATGCCCATCAGCAACTCTGGGTTTTTCTGATTGTGCCATTAGAGAGACTTGCAACAGGGTAGCAGTCATGTAGGGTCTGACTCTACAGCTGTGATGAAACTGAAAAAGCAAAATGTAATTATAAACATGTATCAAATATATGGGCCTTGGGGATATCTGCTTTAATGATATATTCAAAGAAATTAACAAAATAAGCTGTAAAACATCTTTTCTTGAAATGTTTATTAGTCCAAAGGCAAATATTAATTCATTTACACCTTTGAAAAGTAAGCACATAGTTTTGAAATCTGTAGTCTCATTTTTATCAGGCTAAAAGAGTAATTAGATAAGCTTTATTACACTCAAGCAACATACTCTATGACACTGATGTAAAACTGAGAAGAGAAAAATTCAGGCAAATAACTAGAGGTTATTTGAGGAGGTTTTACAGATCACCACATAATCAGCTTGCCTAATTTTCTGTTATTGAAATGATCAGTTGCAATTCAATTGATTAAACCCCATACTGGTTTTGGTGTCTTATACACAAACCTACTAAAACAAGCAGAACTTGGAATATTCTTGCAAAAATTCCTTTGCATTAAAACCGAGGGCAACAAGCTTGCTTAGTTTTATTATACCATTAAATAAATATTTATTATTCACCCAGACAGACTACTTTTTGTGATTATAAGAGAGTAGTTGTTGATTAAATCTGCAGACTAAATGTGGGGTACACTTTTTGATAAGCACATTTATAGGAAGCTCAGAGGAAACCAATTTCAAATGATGATTATAATGGGGAAGTAGTCATAAAGTAACAGCTTGATGTTTCATTGTTTTTCTCTTCCACTTATTTTAAAATCAGATTCACTGAATGTAAAAGTCAATACTTATTTGGGGAGTAATTTTCCCCAAATTTTAAGCTTCACATAATGTTTGCATAGCAAGATACTTCTGCTTCCAGCCTTTAGGAATTAAGAACTGATCAGAATTTAACTAGAGGGCAGTTATTTTATAATAAAGACCGAGGGACAAGTTGCACACGTTGCTAATGCTATAATTTGATGGTGTTGTCACTGTTATTAAAGCCTGTCAGGATATTAAGCATCTCAGCAGAAATACAGAAAACAATATATGTATAAAACCAAAGTGCTATTTTTACAGCATCATTTTCAAGACTGCATTCTCGAACACCTTTTCCCCTTTCCACATGCCACCCCTCTTGTTTTCAATTTGGCAACAGTTATATTCTGCATAATGTGACAGCTCAAGAAGGGTTTTAAAAAAACAAGTCTTTTAAAAGAGGGCTGTAAATGCCCAAGCACAGAGAGCATGCACCTAAATTTCTAATTGTGATGTGTTCTCAAACCTGATAAAAGCACAAGGGCAGTTTGATACGCTTTTAAAAGGTTCCGAAAACAGAACTTACATGGATCATCTCTCTCTTGAGCAGAGCATAGCAACCGAATATATCGCTTGTGGTGTAAGCTTTTGTAGTGAGCGTTTTACTAATTCTTGTTCTCTGGGAAAGCTTTCTATGTCTACCCTGTGACAAGGCACGTCTCCACGTCTCCTTCTTACTGTTTACACAGCCACAGTGTAGCCCACTTGGAAATAATTATCCGGTTGTCAGATCTCCACACTGTCCCTGCATCTTCTCAGGCTTCCCCCACCTCAGAGACCACACAGGAATTTGCAAGCACAGTGCCCAGGAGCACCTTTTATGAATGTGGATGCGATTAGACCGGCCCCCCTCTTGCCGCCAGGTTCATTACTTGAGGATGGCGAACACACGCTTTTGCCAGTCTCGCTGCAGTCTTTCTTTCCTTATCTTGTCTGTGTTGAGCTCGACAACAGTCTGGGATTTGGGAGGAAGATTTCCCTAAACACACAGTGGAAGCTTAAGAGGCGCATCTTTTCTTCAGGTTTGCCCATCTCCAGTGGAGTGTTTTTTAATGAAAAGATTAAAGAAATTGTGTGTGATCCTTTAATAACACCCTCTATATAAAGTGAATATAGTTTATACCAAAATTATAATTATATAGAAATAAAAAATATCGGTGCCTTTTTGATTACCCTTGTTTATTCATTATGGTCTTGGAAAGAAAACCAAGCAAGCAAGCAAGCTTCTGCCTATTCTATAGTAATATTTTATTATATGATCATTGGTATTTTTATGGTGGAGAAGTGAGATGCTCCTGACGGTTAGGAAAGGTGATAACTGATTGTATTTTACCTCTAGAGGTTTAGAACTTTAGAAAATACCGACTTCTTTTGTCTTGTTTCTGAAAGTTTCTTTGTGGATTTATATATAGTTGAGATGCATAAATGTAAACTTTAGGTTTGAGATTTAAAATACCTGTTGTAAGTTAGAAGAATTATGTTATGAGGCTGAATTCATTACACCAGATGAAGTTCACTTCATAAATCCATTATACCTTAGCTATTTGCTTCTGATAATCTGAAAGTGGCTAGAGCATGGTTGTTTGGGGTAACTTGACATGGAGGTGAGAAAGCTTTCGTTAATAAGAAGCTCTGTAAACCAAGTGTGCAATGCCAATATGAAGTCTCTTGTTGAAGTATTCCACGCCCATTAAAGGTTCTTTCCAGACAATTGTCCACTATCACTGATTCAAGAAAATCAAGACATTGTATGCTGCTTCTGTGGCCATCATTCCCTGAGGCATAGACTACTGGATCCGCAAGCCTGGAAGGACCCCTGGGGCAAATCTACGCCCTCGTGGTCCTTGTTACTTCAATATCTTCATGGGAATTTCATATGCTTTTTGTGTTTGATATATGGTATTCAATTTGCATAGTATACACTTCTTTGTAATCCAGTTGCTGTTAAGAACGATTTACTTTAAAGGAAAAGAGAAAACTACATCATAGTTCCCTTCTTTAGTGTTCATGCAATGAACGGCTGAGCATTTATAAGCAGCACCAAGTGTATTACAGGCAGGGTGTGGAATCTTCGCTCTTTGACCTGTGATTAAAACATGAACTTGAATCCTTGTGCAGATTGGTTTCTGTTTGCTTCAAAATATGTAGAATTGTGGTTGATGATTAATTTGCAAGATTGTACTAACTTTGAGAGCCTACAGTTTTATAGAAAACACTTCATGTTTTAAAATGAAGGAGCTTACAGAATGATACGTTATTAATATAATTTGGCTTTTGTTATGCAAATTGTTAACACCAGCTATTAAAATATATTTTAGTAGAAATGCTTTAATTCATATTTTTTCCTCTACACTGTGAATCTTTAAGCCTTGGTGGACTAGAGCAACATCGTGCTGCCCAAAGGACTAACCTATGCAAACCAGTTCACATTTCAGTGGATGTCACAGTAATTGTGTAATATGCTGTTATTTCCCCCGCATAATGTACAGCAGCACTGAAATAACATGTTCAGCCGAGCATCGTGTATGTACAGACAGTTACTCACAAACCCTTCAAGGCTACCATGATCATTAGTATTATTCGTGTAAGAGCAGATTGCTGACTTATCTACTGAAACCATTTGAACGATGTCAGAACAAGAATGACAGATGGATGCATCGGCCATGGCTCCCAAGTGGTCCCTGCAAGTGTTCTCCTGTGATGAAGCCTCGTTCTCAGATGCACTCTCTCCAGGGTATTATTATTCTGTGTCTTCTTTCTGTATTTGTAAAACATTATAACGCTTTAATTTCCTATCTCTACACATTCGGTTGGCTTAAATAAATGCAGGATGTAACAAAATGGTTCCACTTGTCAGTTCTCACCTTGGTTTCTTAGAGCAGTGCTCATTGATAATTCCCTGGGTGTGGGTTTATCGTGACAACTCACGTCAAATCGCCTCAAAGGTCTGTGCTGGCCTCAGACCACTTACCTTGGTGAGCTGTTTAGAATGTGTCTTCCTCCTACACATAAACTTAGCTTTAAATGAAAACAATAGTATGCTTTTTCAAGCTGAGTCTCTTTCTGATTTTATATCAAAGTGCTGCAGTAATTCATCATTGTAGTTCACTGCTTCCAAGGCTGACTTCCTCATATGTCCTCAATAGTACGACTTTAATTTTCTTGTGTTTGAAAGATGAAAGAAACAGCTTGCAGCAAAGAGTAGAAAATGCTCAAACTGGGTACATGAAACAGGGAGATGCTCTGATTTCCCAACTCAGAATGGCTCATTTATCATAGAGGATAATTGCTTTTCCCCCTAATTTTCCCATAGTTGGAAAAAGTGAGTTTGTTCCTTTTTTTGCCCTCATGTAAAACTACTGAGACTAGGGTCTTAGCTTTATTGTGTTATTTTGTAACAGTTCTTTGATGGTGCCTAAATTCTCCTAATTATAAACCGATAAACTCTGCTGATGACATATTTAGTGCTTTTGCGCAAAGAATACTCTTCCTAATCTTGAATTTTCTGTTTTTCATATTCCAAAAGTATGAAATATTTGTATGCTATTAATCATTAAACATACTTATAATATTTCAA EMBV3_38491 TGTACATACCCACTGTGAGACCGGTACTGGCAACGATGAGAGCAGAAAAGTGGGAACACT Gene GeneID:541200|HTR5A:XM_002687054:169_cdna Constitutive 0 NULL GeneID:541200 4 GENE HTR5A NULL 5-hydroxytryptamine (serotonin) receptor 5A EMBV3_00165 TGATCATATGTGAAGCAAAAGGAACCTGGACTAGGGGCAGACAGAATCCACAGCCAGCTG Gene BVT0102_030778 - 0 NULL GK000003.2:13753403-13778326 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168461 TCONS_00168459 TCONS_00168460 TCONS_00168458 TCONS_00168457 TCONS_00168462 1 XLOC_103114 Coding TCONS_00168462 XLOC_103114 Coding Coding ETV3 3:13741945-13756904 j TSS126338 5047 1 TCONS_00168462_3 509 5 0.662922850648482 7.22801515862873e-05 0.000726318434958889 0.000161695144446342 6.83769931691214e-05 0.000626675606434387 5.3641365929267e-07 0.000393192158322691 5.98638988586021e-09 0.00040150801052585 0.000520883813309248 0.000218054323002911 3.10635333869869e-08 8.36344255292567e-10 0.000964716381096722 0.00106286922045339 0.00212961249434048 0.00117836353242733 0.000166397732394648 0.000733129713232849 7.10517642035249e-16 2.47118537016084e-07 0.001515732785551 0.000622766888582421 0.000787591518826572 0.000134570998278146 0.0016788067748083 0.000195297552870744 0.000272916047357046 0.000258225496833896 0.000798332458111515 XM_005203590.1 ETV3 PREDICTED: Bos taurus ets variant 3 (ETV3), transcript variant X1, 0.0 9090 100.00 0.998414899940559 NM_001145312.1 ETV3 Homo sapiens ets variant 3 (ETV3), transcript variant 1, mRNA. 0.0 2354 90.30 0.340598375272439 TCONS_00168462_3 sp|P41162|ETV3_HUMAN ETV3_HUMAN ETS translocation variant 3; 0.0 959 91.60 0.99803536345776 1 coding 0 0 0 0 0.379144377938241 0.160148639945438 -0.0632293739177711 0.300800967313072 GGCAGGAGGGTGAAAATGAAAGCGGGCTGTAGCGTCGTGGAAAAGCCAGAAGGAGGTGGAGGGTATCAGTTTCCTGATTGGGCCTATAAAACAGAGTCATCCCCGGGCTCCCGGCAGATCCAGCTGTGGCACTTCATCCTGGAGCTGCTGCAGAAGGAGGAGTTCCGCCATGTCATTGCCTGGCAGCAGGGAGAGTATGGGGAATTTGTCATCAAGGATCCGGACGAGGTGGCCCGCCTCTGGGGCCGCAGGAAGTGCAAACCACAGATGAATTACGACAAGCTGAGCCGAGCTCTGAGATACTATTACAACAAGAGGATCCTTCATAAAACAAAAGGGAAAAGATTTACTTATAAATTTAACTTCAACAAGCTGGTGATGCCCAACTACCCATTCATCAACATTCGGTCAAGTGGTGTGGTTCCCCAGAGTGCACCACCAGTGCCAACAGGCTCTTCCCGCTTCCATTTCCCACCTCTGGACACCCATTCTCCAACTAGTGATGTGCAGCCAGGGCGGTTCTCTGCTAGCTCTCTAACTGCTTCTGGCCAAGAGTCAAGCAATGGCATTGATAGAAAGGTGGAGCTTTCAGAGCTGGAGGATGGCCCAGCCGCTGACTGGCGCCGGGGCGTGGATCTCATGTCCTCCCGAAGTGCCGTGGGTGGAGGGATTGGCCACCAGAAGCGCAAGCCTGACATCATGCTTCCTTTGTTCTCCAGGCCAGGGATGTACCCTGACCCCCACAGTCCCTTCGCCGTCTCTCCGATCCCAGGCCGCGGAGGCGTCCTTCACGTCCCCGTCTCACCAGCCCTGCCCCTGACCCCCACCATCTTCTCCTACAGCCCCTCGCCAGGCCTGAGCCCCTTCACCAGCAGCAGTCGCTTCTCCTTCAGCCCTGAGGAAATGAAACACTACCTTCACTCTCAAGCCTGTTCCGTGTTCAACTACCATCTGAGTCCACGGACATTCCCTCGGTACCCAGGGCTCATGGTGCCACCACTGCAGTGCCAGGCGCACCCCGAGGAGCCATCCCAGTTTTCCATCAAGCTGCAGCCCCCACCCATCGGGCGGAAGAACCGGGAGAGGGTGGAGAGCAGCGAGGAGGCAGCACCTGTCCCTGTTCCCACACTGACTCCTGTCCCACCGAGGATTAAGGTGGAGCCAGCCTTGGAAAAGGCTCCTGAGAGCCTCAGGCAGTCGGCACGGGAGAAGGAGGAGCGCTCTCAAGAAGAGGGCACTGTGCCAGGCAGGACCACGGAGGAGGAAAAAAGCACCATCTTTGCCCGCCCGGCTGCACCGCCTGTGTGGCCTTCTGTACCCATTAGCACCCCAAGTGAAGAACCCCTGGAGGTGTCTGAAGACAGTGAGGACAGGCCTGGCAAAGAGCCCGGGGCACCTGAGAAGAAAGAAGATGCCCTAATGCCCCCCAAGCTTCGGTTGAAGCGGCGCTGGAATGATGACCCTGAAGCCCTGAGTAAGAATGGCAAGTTTCTCTGGAATGGGTCCGGACCCCGGGGCTTGGCAACAGCTGCTGCTGATGCTTAGAACTGGAAGAGGATTGGGAGCTGTTTATACTATAATCAAAACACACACATGTATTTATGTAGCAAGATTTCAGGGTGGGGGGTGGGGAGGGAATTAGACTGGTTTGATCATTCTAGGGGTGTAGACTTGTATTTTTGTTTTGGGGATAGGATGGGGTGTCTTCTGTTGTAAATTAGGTGGGATGTGAACACACTTTTTCCTGGTGAGTAGGACGGGATTGGTATTGAACTGAAAAGAGAAAGAGCCTCTTTCCTATTGAGGCTTACACTTTGACAAACTCCCAGAGGGCCAAGAAACTGTTTGGTCCCATAATAGTTCAGGTTCCAGACTTATTTCTTTTCTATTGTATTTATATATGGAAAGCCATTAATGAATTTATTTTGCTCTGAGAGAGACACATAAAGGGAAAGGGGCATGGTTGGGAGGTTGAGCAGCCAGAGACCATTAATACTAAGTATTTTGCCTGAAATGTTTCTTTATAATTATTTCAGGGGAGAAGTAAGATAATCTGTCTTACTGGGGCAGGGGGATGTTCACGTGTTGCTCTTTTTCTTTTTCCCTTTGTTGTTGTTTGGCTTTTTTTTTTTTGATATAGAATGTTTTCAGGAAACATGAAATGTACTGCCAGTTAGAGCGGGGCTGGGAAGGCACAGGCACCAAGCCTCAGCTACCTGGTTGAGACAGGAAGCCCTGCTGTGAATTTCTTGGACATTTCACCTACTTCCTCTATTAAGAAGCCATGAGGAGTTGTAAACTCTTGTTCAGGGAAGAAAGAAGAGGACAGAAGGAAGTAACCTGATGCCTTTAAAAACAAAAACACAAAAATTATTATTTTTTTTTCCACCGTGCGTTTAGGGAGCCAAACCAGTGTGTGACTGTGAGCGAGTTGACTGAGACACGAGTTGAAGATGTCTCTGTTGTGTCTGCTGCTCTTACCGTTTTCTTCAGTCAAAGCCTTAACAATGAACATACTTCAACATGATACGGGTCTGTCAGCGTAAACCTGTAAAAGGGCATGGACAGCTTTTCAGATAATCCAGAGGTGTTGGAAATGGTTAAACTTTAAGCTGGTATTTAATCATCCCCACTTGATGTTATTGGGATGGGTAGCAGAAAGGCAGGATTGTGGGCTTTAAGGGCAAATTATACTTGGAAATGCAGAAGGTGGCTGGGGGTACAAGTGGATGTGTATGAGGTTGAAGGAAGAGGTGGATAGGAAACACAGAAGGCAGACAGATGCCACAGGGCTGGCAGAAGTGAACCGTGGGGGTCTGTCCTGACGTGTTGCCATTCTTGCCATACCCATTCCCCTAGATCGTACTAATTCTTAAGATCAGTTGACTGTCCATGAAACTCCAGGGATTGTTTCTGCATGGGAAGTTCTGTTGCATCAACTTCAAAGGAATGGGAAGGTATTGATCATATGTGAAGCAAAAGGAACCTGGACTAAGGGCAGACAGAATCCACAGCCAGCTGTGTGTACGTGTGCGCACATGTAGTACATAGATACAGAAATACCTAACATGGCTCAGACCCTCAAGCAGCAGAGGGGGGAATAACTGCATATCTGGTAGGGGCAGGAAGTGGGCACAGGGATGCTTTCAAGAAATTCCTGACTCCATCTTACCCTAGGTGAACTCTATGTCCTAAGAAGCACTTGAGGGTTGTCTTTTTATGGTGGGGTGGGGGGGGTTTTTTTTTAAACTGGAGTGCATGCTTGAGAGAGGAGCCCGGGAAAGGTTAGAGCAGGTGGGTGAGTTATTGGTTTAAGATGACTTGAGTCCATCATGCCTTTTTTTTTTTTGGCAGTTGTCCTCCCCTTTGTTTGAAATTCCATGAGTGACTTGTCTTTCCCTGGAAAAAGGATTAGGAGAGTGGTCCCTAACAACTCAGGCTGCCTTTGGTTGGTTGTGTTTTTGTCGGTTCCTTTCTCTGTACCTCGACTTACCTCGAATCAGAATAGCAAGCCCAGGCAGGTGGAAGAGGCATCTCTGCTTGGCATTGCCCAATCTAACCAGGGAGGCTGGCTGCCCACCACCTCTGTCCACTGGAGCGGAGGCGCCGGCAGGTGTCAGTATGAACTCAGGAATAGACATGAGGCCTTTAAAAAAGAGAGAGAAAAATCCATGATGCGTACCTGTAACCCCCTAGAACCCAAGTGCCAGAATTAATTCCTAGATGCTGCTTCTGTTTGAATAAAAAGTCACTGCTTTTACACTTGAAAAACACTCAAAAAATGTTCAACTCCATGAAAACTGTTTTTGGCTTTAAGAAACTGTTTGATGTTTAACTGTTTCCTTTGATTGCCATTCCACCAGTAAATTGTTGGTTGATTTGCACTGCACACTGGGGTTGGGGGAGGGTACTACTCAGAGCTGAACTTGGGATTGCCTGGGAAGTGGACCAGGGGATGTGGAGGTCATTGATATATCCTGGGGCAAAGGGGTGGGAGATAGTTTTTCTCCCCTAAGTCCACTCCTGGCAGCACCTGTCACAAGCCTGGCACAAAGCCAGGTCATTCTCTTCTGTGAACATCTCATCACTGACAGCATGTGGAAGGGGGGGGACAACACCAGGTCTATTTTCCCTCCCCATTTTTTCCAGCTTTTGCTGTGCCAAATGTTTAAAAATTTGCAAAGACACATTCTGAACTTGTATTAATCAAGAGCATGTTGTTGCAAGCCGTTTGCTTTTCTGGCTATAGGGAAGAACACAGTATAGAGACCTCTTCAGGGCATCCAGACTTGCTGAGTGTTTGTTTTTTAAGAACCGCTAGGAGTGAAAAATGAACAGTAAGTCCCTCCAACCCCAGTTTTCAAGCTGCACTGCATTAAACCCAGCTCGCTAACAGGGAATCACTGCACCCTAGTCCTCAGTGGGCCAAGAAACTTTCAGAAGCATTAAAAGAAAAAAATAGTTGAAGTATATCACTTCTTACCAAGCGGGTAGAGTCAGTTAGTTGGCTGTTTGTCCCTTGTTTTTTATTTATTCCATAAATATGTTTGTGTTCTTTGTTTTATAGACAGTAATGAAATATACTTTTAAATTTGGGGGAAAACTGATCCAGTCTTTCAAGAACTGTTTGATTTTTTTGTTCTTGGCAGGGTGGGGGTGGGGCGTTACCAGTTAATTTGTTTTGAAATATTTAGGCATTCTTTGAGTTATAAAATTGTGATGCAGGGATATTTGGAAATTCACACATGAAAGGTGACTTCACTAGTTACCCGCTTAAGCAGAATAGTGTGTATATGTACATAACATGTAAGTAATCCTCACTCCATTGTGCAGTGCCTTTTAGATGTTCTGCTTTCTATAAAGTCTTCAAATTTTTGCATATATATATTATATATATATGATGTAATGTTATAGAAATATATGTATAATATACATATTTTTTCCAGGGGTATCTGATAGCTCTGTATTTTGTTATGGAAGTTGAAAGAAAAAAAAAAAGTATTTTACCTCAGAAGTTAAATAAAAAAAAAAAAAGTACTTTTAAGTA EMBV3_38015 AAGTGTTCCTAAAGTATAGCTTTTAGATATAAAGTGTTAAGTAATACTACTGAGGTTGGG Gene GeneID:509680|PIGM:NM_001015563:254_cdna Constitutive 2 NULL GeneID:509680 3 GENE PIGM NULL phosphatidylinositol glycan anchor biosynthesis, class M EMBV3_29511 CAGCATCCATCTTTAAGCAGCCAGTGACCAAGATCACCAACCACCCCAGCAACAAGGTGA Gene GeneID:100337449|LOC100337449:XM_002689180:241_cdna Constitutive 0 NULL GeneID:100337449 7 GENE LOC100337449 NULL methyl-CpG binding domain protein 3-like EMBV3_29850 AAAGTTTCTTTGCAGCCGCCAGAGCCGCCATCTCTGCTTTCCCTACAGACAGCCTCGAGA Gene GeneID:514607|IRS4:XM_002699890:147_cdna Constitutive 0 NULL GeneID:514607 X GENE IRS4 NULL insulin receptor substrate 4 EMBV3_10491 ATAGAAGGAGCTGAGCACTGCCCCCCGCTACAACATGGGTGAGATCCAGAAGCATTATGT Gene BVT0101_005546 + 0 NULL GK000014.2:2530854-2539704 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25460 AGAGGCACCTGGGTCTGATGGGGTATCAGCTCCTGCCGCTACCCTTTGAAGAACTGGAGT Gene GeneID:509781|FASTK:NM_001035077:610_cdna Constitutive 2 NULL GeneID:509781 4 GENE FASTK MGC137976 Fas-activated serine/threonine kinase EMBV3_15278 GAGGGCGTACTGCAGGAGGCACTGGACAAGGTGACAAACCGCTACCTGTCCCAGCTGAAG Variant GeneID:338085|COPE:NM_176673:24_cdna 756^824 3 EMBV3_12417 GeneID:338085 7 GENE COPE MGC133960 coatomer protein complex, subunit epsilon EMBV3_06076 AGCCACAGTCACACCATGAGGCCACCACACAGCATCTGCGGTGCTTAATGTTACTCACCT Gene GeneID:100298610|LOC100298610:XM_002690554:126_cdna Constitutive 0 NULL GeneID:100298610 10 GENE LOC100298610 NULL hypothetical protein LOC100298610 EMBV3_35097 CAGATGCTAGAGAGGGATAAAGTGACCCCATCATTCGTGTGGCCGCAAGCTGTTTGGCAT Gene BVT0102_172079 + 0 NULL GK000018.2:34556069-34576857 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085995 TCONS_00085996 1 XLOC_052010 Coding TCONS_00085996 XLOC_052010 Coding Coding DYNC1LI2 18:34573856-34597792 = TSS64081 5001 1 TCONS_00085996_1 492 13 0.791602256110299 0.00181974987165911 0.0011568354546605 0.0023084194816589 0.00129736983692728 0.00176865415997434 0.0010006859952343 0.0012935001972227 0.00162583147155967 0.0027567280226866 0.000253216226623084 7.56739741841698e-05 1.16631430742955e-05 0.000277903978195464 0.000376497672189769 0.000658228118967259 0.0021319026093913 1.6776805418166e-10 0.00350432266681826 0.0027194070274465 0.00243560093058788 0.00122028160792189 0.00146838237051228 0.00055381371601968 0.00144381705756796 0.00358053295699973 0.00387270107214779 0.00189277788328775 0.000111668812898725 0.000159924987054535 0.000192056945461021 NM_001206152.1 DYNC1LI2 Bos taurus dynein, cytoplasmic 1, light intermediate chain 2 (DYNC1LI2), mRNA. 0.0 3541 100.00 0.392321535692861 NM_006141.2 DYNC1LI2 Homo sapiens dynein, cytoplasmic 1, light intermediate chain 2 (DYNC1LI2), mRNA. 0.0 5198 86.42 0.872625474905019 TCONS_00085996_1 sp|O43237|DC1L2_HUMAN DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2; 0.0 1003 98.37 0.997967479674797 1 coding 0 0 1 1 0.0108070692596401 0.925650597950933 -0.00642327863295276 0.889590990222862 CCGGGGGAGGGCCCTCTTTGTGGCTGCAGTTGGCAAGATGGCGCCGGTGGGGGTGGAGAAGAAGCTGCTGCTGGGCCCCAACGGGCCCGCGGTGGCGGCCGCCGGCGACCTGACCAGTGAAGAGGAGGAGGGCCAGAGTCTGTGGTCCTCGATCCTGAGCGAGGTGTCCACCCGCGCCAGATCCAAGCTACCGTCTGGCAAGAACATTCTGGTCTTCGGTGAAGATGGTTCTGGTAAAACAACCCTCATGACTAAACTTCAAGGAGCTGAGCATGGCAAAAAAGGAAGAGGCCTAGAGTATCTCTACCTCAGCGTCCACGATGAGGACCGAGATGATCACACACGCTGCAATGTGTGGATTCTGGATGGAGATCTATACCACAAAGGCCTGCTGAAATTTGCAGTTTCTGCTGAATCCTTGCCGGAGACCCTGGTCATCTTTGTTGCAGATATGTCTAGGCCTTGGACTGTGATGGAATCACTACAGAAATGGGCTAGTGTTTTACGTGAGCACATTGATAAAATGAAAATTCCACCAGAAGAAATGAGGGAGCTGGAACGGAAGTTTGTGAAAGATTTTCAAGACTATGTCGAGCCTGAGGAAGGTTGTCAAGGTTCCCCACAAAGAAGAGGGCCTCTGACCTCAGGTCCTGATGAAGAAAATGTTGCCCTGCCTCTCGGTGACAATGTGCTGACTCATAACCTCGGGATCCCGGTGCTGGTGGTGTGCACAAAGTGTGATGCGGTGAGCGTCCTGGAGAAGGAGCACGATTACAGGGACGAGCACTTTGACTTCATCCAGTCACACCTACGGAGATTCTGCCTTCAGTATGGAGCGGCTTTGATATACACATCAGTTAAAGAAGAGAAAAACCTCGACTTGTTGTATAAGTACATTGTTCATAAAACATACGGTTTCCACTTTACCACTCCTGCCTTAGTTGTGGAAAAGGAAGCAGTTTTTATACCCGCAGGCTGGGACAATGAAAAGAAAATAGCTATTTTACATGAAAATTTCACAACTGTTAAGCCAGAAGATGCATATGAAGACTTTATTGTGAAACCTCCTGTGAGAAAGCTGGTCCATGACAAAGAGTTGGCAGCGGAGGATGAGCAGGTGTTTCTAATGAAGCAACAGTCACTCCTTGCCAAGCAGCCAGCCACGCCCACCAGAGCCTCCGAATCCCCTGCAAGAGGACCCTCTGGCTCTCCGAGAACCCAGGGCCGGGGAGGGCCAGCCAGCGTGCCCAGTGCCTCCCCAGGCACGTCAGTAAAGAAGCCGGACCCGAATATCAAAAATAATGCAGCAAGTGAAGGGGTGTTGGCCAGCTTCTTCAATAGTCTATTGAGTAAAAAAACAGGCTCTCCTGGAAGTCCTGGTGCTGGTGGGGTGCAGAGCACATCCAAGAAGTCAGGACAAAAGACTGTGTTGACAAATGTTCAGGAAGAACTGGATAGAATGACTCGAAAGCCAGACTCCATGGTAACAAACTCTTCAACAGAAAATGAAGCCTGATCCTCCTTAAAAAGTGCATATGTAAAATGACCAAATAACTATGTATATTGATCTTCTCTAAGACCAGGATTTTTCTGATATGGCACATGCTATCAGTTTTTTGGGGCAGGGGAGATGAACTTAAAAAAAAAAAAACTTCAGTGGCTGTCCGAGTGTGAAATGCACCTTTAGGAAGGTTGTGTGTCAGACCCCTCTGTGATGGATAACCCTTGGACTCTCAGGCGTGTGGCTCTCTTGTGGGCAGCAAGTGCAGCTGGGCCTCTTGTGGAAGGGAAGATAGATGGAGAGAAAGAGGGCCCACTTTCTTTTAGGGTGGAGCCAGTGAGACCGGGAAGTCATTGATCAGATGGTGGCTAGTCCAACCAGTTGCATGTTAACAGATTCACTTCTTCATGGGAAGCACATTAAGTAGCAGAAAGTCCAGGGAAGAGAAAGACTGGAAGGAAGAATGAGAAAAGTGTTGGGGAAGCTGAACGTTGCAGGAGGCGGAGGAGGAGATGAGCAATGTTAGTAAATACTGTGTGTTCAGTAGAAGTCAAATCATTTTTAAAACTTAAAAATCAGAAGTGTTTCCAAACTAAACACTAAGCAAAATAAGAATTGGACTTGTTCTGAATGCATCTTTACCTTGTGGAAGATGTGTTAAGTGTGGGGATGCCTGAGTCAGGTGGAGCTGATGTGGGGGTGGGAAAGATGGCAGCTGCCCAGGGCTCACGTGCATGGCCCAGGCCGTGTCCTCGTGGGAGGTGTTGGGCTCCACACATGTGTATCGTGGGGCAGTCAGTCACTGTGGGGTGTGTTTAAAGTCAGCAGTTACCACATTAGTTTACCTTGAATTGTGTTTTCTGAATAGCTTCTGCTTTGTCATTTTTTATTTCTTTTTTTTTTTTTTTTTACTACCACAGGCTGGCCTATTAGTAGAGAATGGGTGACCAACGTCTCATTTTACCATAATGCAGTGTGCTACAGAAAGTATGAAGGAGGTTTTAATGTAATTGCACTCTGATTAATTGGCTCACACTGTCCCTGCCTTAAGGTCATTGGAAACCTTCATGGAGTTCCAGTGATGCAAAAGGGTTTTGTCCTAGCTCCCTGGTCTGATCAATGCTATCAGATAAACAGATTAGTATGAATGTTTTGTATTGAGGATGGAAATGATGCATTTCTCTTGTTTTATGTCTTTCATAAACTAGCATTTTTTTTCTTATGGAAATAAGTGTTTCAGGTGTTTCCATTTAGGGCAGATACATGCACATTGTCGTGTCATACCATCATCCTGGAAGTGACTTCTGTGGATTTAAAACAGCACTTTTAATTTTATACATGACACAAAACGTTGAAATGCAAACACTACCATTAATTTAATGTATAGAACCTTTGTTGTCAAACCAAGGGAAAAACCACAGTTCACTTCTGTGGAGTTTACTTTTTTTATATGAATGTTTGTTGTACTGTTTCTGAGCATAACTTCCCTAATATCATTACTTTTACATACCAGATTTGACTGACCACTAACTGTACTGGGTGTAACTTAATATCCTGTGTTATATAACAAGACTCTAAGACTGTCTTGAATTGCTTTTTTGTAAAGGTCTGAACACTGTTAAGGAGAAAGCTGAGTATTTACTTACCTTTCTGACAAACAAAAATACGTTTCTCGTGCCAGTTTTATTGTTGAAAATACACTCCCCCCCCCTTTTTTATTTTTTATTTTTTAATGTATTGTGGCTTCCAGTTACCAGATTGTCCAGGTGATGACAGTAAACTGACTTGGAATGATAGTTGTGGTATAATGACCAATAGATGCCAAACAGCTTGCGGCCACACGAATGATGGGGTCACTTTATCCCTCTCTAGCATCTGGCAGGGGCGGGCTGGGGGCACAAAATAAGTGACCTCAGAAATAAAACAAAATTCTTTGAAAGGCCACATATCCAGGAGGGAGACAGTGTGATTTTAAATTTTAACGCAAGACTTTACTTTTATCACTTAAACTGATAAGCACTTTTTGTGTCAGTATAAAATGTACTAGAACCGAAGAAATGCCAAGACATCTGTCTTGTGAAGGAGGATTTCTTGGCAATCACTTTTAGTTTCTCGGGACAAGTGGCTACTCCTAGGATCAGAAGAAGCTGATGTATAGTGTCATGTGCTCAGTGGTTGCCAAAGTCTACCAACTTTGGGGAGCTGCAGGGTTCTTTTTAGTGGGGGTGGGAGGAGGGGGCATATTTTTTGTTATTTTGGGGGTTTTCAAGCATTGGAACCAAAGGCCAAACAATAAACAGCCTTTACTTTTTAAAGTAAAATTCATTTTATTTGCAGAATACACTTGTATGGTAGACTGTTAAAGATAATTTTATGACTATTTATATACATTGTAGTGGCTACATCTGCTGTTTGTCTTCAAAACGGAAAAATCAAAGAAACAAGCCCAACCTTAAAGATATGGCCATGATAAAGGCCATGAATTGGTCTTTGCTAAAAATGCAACGGGTATGCTGCTAGAATTATTTAATTTTGTTTGCACTTTTTTTTTTTTTGGATTGGCATTTTTAAACCAGTATTTAAACTGAAGATGTGTTTTATTAGTTAATTGAAAGTGACTGCTCTGTACATCATGACCTTAACAATGTTGATGCTGTAAGTGAAAGTTCACTGTTGTCTCTATACTAAGTTTATTGGTGTTTTTAACTTAAAAATTAGGACTGCAGATATATTCCCCCACCAGCCTTAGTCCAGGGGTGTGACTCTATCTGGATGCAGTATGCAGTCATGTGGAACCTTGCTTTCTAGTGCTGAAAAGAAGATGTCTCTAATTACTGGCTTCAATAAACACGAATCCAGACTGCTTACAATTTTTGGTGACTTTCTTTACGATAAATCATCCCGCTGGAGATACATTGAGTTGTCCGCTAGTCATATAGGGGGTGTCTACCATGTAGCTAAAAATGTATACCTCTGTCACTTGAAAATATCAGAAATTCTATTAAAGAACATTTTAAAGCCATATTCTGAGGTATGTGGAATTCCAGGCTGTGGGTAAAGGGCACGGGTTGTGAGTTGTCCAGCATAGTTTCTTGCCTCATAGGTAAATTTTTGATTGTCAGAATTGAGCTAAGAAATTTTTGCTTAACTTATTTAGAAACCTTGAGGATTCATAGAGGAATTTCAGAGCCATAATGTTTCTCACTTACTGAAATGGGCAACAGTAAAGTATGTTTAAGAAAATTGGATACTTTGGGGATCAAAGTGTCACGGTGGAGGGAACTCCTCCTCTGAGGCACAGATGGGGTTAAAAATAAAAAAAAATAAAAAAAAGAAAAGAAAATTGGATACTTTATATTAGAGATGAATTGTGTTTCTAATTATTACACTTTTAAGCATGTTGAATTTTCTGTTCTTTTTAAGCTGATTGTTTACAGAAATTTTCTCCCCAAGTTTTTATTTTGAAAAAAATTTTCAACAGAGAAGTTGAAAGAGGAATA EMBV3_22935 CAGGACTGGCAAGACCATCGAAGAACTGGAGAAGGAGATGCTGAATGGACAGAAGCTGCA Gene GeneID:514456|GPD1L:NM_001100363:98_cdna Constitutive 0 NULL GeneID:514456 22 GENE GPD1L NULL glycerol-3-phosphate dehydrogenase 1-like EMBV3_11001 TGCCTCCGTGTAACGCTGACTTGGCGGTTGTGCCTGGATGTGCCTTTTCTCCTGAAATTA Gene GeneID:509611|TMCO3:NM_001098003:48_cdna Constitutive 0 NULL GeneID:509611 12 GENE TMCO3 NULL transmembrane and coiled-coil domains 3 EMBV3_19343 CACGTAAACCAAGCTACTCAGTCTCTTTTCTCCACCGAATTTTCCTACTGAGCTCTCCTC Gene BVV0102_111483 - 1 EMBV3_03639 GK000002.2:124736809-124819575 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00207080 TCONS_00117583 TCONS_00223729 TCONS_00063594 TCONS_00081496 TCONS_00192189 TCONS_00223718 TCONS_00201908 TCONS_00173130 TCONS_00192192 TCONS_00254827 TCONS_00232656 TCONS_00112239 TCONS_00187642 TCONS_00192191 TCONS_00223721 TCONS_00206518 TCONS_00062709 TCONS_00173129 TCONS_00129429 TCONS_00187683 TCONS_00066236 TCONS_00054146 TCONS_00232666 TCONS_00060246 TCONS_00164317 TCONS_00232768 TCONS_00223726 TCONS_00054102 TCONS_00199376 TCONS_00201906 TCONS_00054100 TCONS_00201912 TCONS_00062705 TCONS_00142119 TCONS_00135598 TCONS_00201907 TCONS_00063595 TCONS_00201910 TCONS_00139971 TCONS_00152632 TCONS_00203551 TCONS_00200984 TCONS_00205857 TCONS_00192190 TCONS_00157094 TCONS_00015588 TCONS_00152623 TCONS_00034471 TCONS_00151323 TCONS_00218539 TCONS_00060247 TCONS_00182805 49 XLOC_006328 XLOC_125599 XLOC_071749 XLOC_137028 XLOC_038320 XLOC_050375 XLOC_117131 XLOC_137017 XLOC_123553 XLOC_104301 XLOC_157759 XLOC_142141 XLOC_068136 XLOC_113687 XLOC_137020 XLOC_125040 XLOC_037436 XLOC_078142 XLOC_113728 XLOC_040950 XLOC_031955 XLOC_142151 XLOC_036632 XLOC_100199 XLOC_142252 XLOC_137025 XLOC_031911 XLOC_121029 XLOC_123551 XLOC_031909 XLOC_123557 XLOC_037432 XLOC_086544 XLOC_081821 XLOC_123552 XLOC_038321 XLOC_123555 XLOC_085033 XLOC_092397 XLOC_124202 XLOC_122634 XLOC_124763 XLOC_095554 XLOC_008519 XLOC_092388 XLOC_020687 XLOC_092086 XLOC_131859 XLOC_110990 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_34151 TAGCAACCTACAGTCCTGTCCCACTTGGCCTCTGCCTGGTGTGTGAGTGTCTCTGAGTTC Gene BVT0102_171007 + 1 EMBV3_12373 GK000008.2:86579453-86686387 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13410 AATGAAGTCAGCAACCTGTCCCAACCACTGTTCCCTGTCTGTAAAACATAGCTGGCTGCC Gene BVV0102_089513 + 0 NULL GK000002.2:129534741-129536931 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106833 TCONS_00103945 TCONS_00106834 TCONS_00106835 TCONS_00103948 TCONS_00103952 TCONS_00106832 2 XLOC_062899 XLOC_062255 Coding TCONS_00103948 XLOC_062255 Coding Coding SFRS13A 2:129522512-129536614 j TSS77083 3774 1 TCONS_00103948_2 165 0.0771065182829889 6 0.732784908871711 0.000124407952155901 0.000287344874169669 0.000149085841447915 4.82593489533541e-07 0.000128499322182814 5.94205055758004e-05 0.000124921628975334 0.000438521600088777 0.000147093473267479 2.54415565384269e-05 2.56659318024754e-05 4.85667652138654e-10 5.16487259383965e-05 9.70689070896426e-05 0.00014434502472971 0.0012174753553184 0.00291839709761435 0.00185636535443691 3.8436823033452e-10 2.96086301876426e-05 0.000160592289992485 0.00016800883876013 0.000744309515688658 0.0009769611867539 4.78796583717244e-05 0.000225433455502687 1.54035331400187e-07 0.000743078336851843 0.000103653505165016 0.000364444235158441 XM_005203276.1 SFRS13A PREDICTED: Bos taurus splicing factor, arginine/serine-rich 13A (SFRS13A), transcript variant X6, mRNA. 0.0 5124 100.00 0.752517223105458 XM_003960014.2 LOC100996657 PREDICTED: Homo sapiens serine/arginine-rich splicing factor 10-like (LOC100996657), transcript variant X4, mRNA. 0.0 2583 86.72 0.566772655007949 TCONS_00103948_2 sp|O75494|SRS10_HUMAN SRS10_HUMAN Serine/arginine-rich splicing factor 10; 9e-102 298 99.31 0.872727272727273 3 coding 0 0 0 0 -0.262517152257723 0.149581655929303 -0.0273610978673548 0.707161210770869 ACTCCGGCCGCCCGTGTGCGCAGGCGCACGCCTAGTGATCTCGCGGGAAAGAACCGTTGCAGGTCCCGGCGTGGAGCCCAGGATCCGGCGCCGAAGCTGCGGACGGTTTGCTGAGCCCGTTAGTGTCCCTGCGGAGACTCAACGCCGGCGTCATGTCCCGGTACCTGCGCCCCCCCAACACGTCTCTCTTCGTGAGGAACGTGGCCGACGATACCAGGTCTGAAGATTTACGTCGGGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTTCTACACTCGCCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGAAGATGCTTTACATAATTTGGACAGAAAGTGGATTTGTGGACGCCAAATTGAAATACAGTTTGCACAGGGGGATCGAAAGACTCCAAATCAGATGAAAGCCAAGGAAGGGAGGAATGTGTATAGTTCTTCGCGCTATGATGATTATGACAGATACAGACGTTCTAGAAGCCGAAGTTATGACAGAAGAAGATCCAGGAGTCGGTCCTTCGATTACAACTATAGAAGATCTTATAGTCCTAGAAAACCAAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAAAGATCTGAGAAAGCGGAAAAAGAACCAAAGAAGGGCAGTTCAAGCGACCAAAGGGTGGGTGGAAGGTGCTGCAGTATGAATACTGTACGAATATTTTGACTCTGGTCTGAAAAGATAAAAGAATGTTATGGAAACTACATGGAATATTTGAAGTCCCTTCAAGTTTGAAAGTAAGCATTTTAGGACAAATAAAAGGAAATTCAACTTTGTACTTGTGGAAACTAATCCCTAAATCTGAATAGGTTTATACTGATTCGTGGGTAACAGGTCCATGTTAAATTATTGGAAACCAGGATGTCTGAATATCAAGGAAGACAGCCATAGTCTCTTACAGTGCCTCTATTGGTCTGTCTCAAAGTGAATTGGGTGAGAAAAGGTATGGTCCAATATAAACTTGGTTATCTCTTAAAAAAGTCAGTTCTATTTTTGCTATTGGGAAATCTTGCCTTTGTTTATTATTCCAGTGCCAGTGTTTTCTGCTAATGCTTTGCTTTGTTGGCATCTGAGTTTCCTTGTATGCCATATGTGGTTTACATCTTCCTTAAACACGCTCCCTCGTAAATTCCAATTATGATACTTGACATCCAGCTAAGAGGGTCCATCTCTTCTCACCTCCTTCCTAGTCAGTATATACAGCAAACATTTACTGAGCCCTTAGTATGCCCCAAAATTGTACTGGGTAATTGGGGAGAAAAACAGGTAAAACTCACTTATTCAATAAATGTCTACTGAGCACAATCTAGTGAATCATAACAGTGTGGCCTCATTGTCTTGTTTGAGGTGTATTATAACAATATTTTACACCATTTATATCCTATGTAATTATAAAATCCAATATACTATCAAGAAGCAATTTTGTGGTTATTTGCCATTTAAAAGTATCCAGTATTTGTTTGCATCGCATTAATACAGATAATGAAAAAATGATTTGTTTTAATCTGTAATAAACTGATTTATTGTGCAGTGACTGTAATATACTAGAGTTATATTTAATTGTTAACTCTGCCTCCTCAAACACATTAGGCAACAATCCCCAAAATAAGTATTTAACTTTGCATCAGATGTAAAGGAGACTCTGGGTGCTATAATTAAAGATTATTTTGAGGCAGACAGAGAGCTGTTAATTCCCAACTGATTTAGTATGTTCTGTAATTGAGAAAATGTTCACCAAATTATACTTTTTAGTGATTTACATGTACATTTTATAGGGGACATGTTCTGTGTATAGTGAATAAATAACTTTTGTAGTATCACAAAATGTTTTGGATTCCTTAGTTCCTCATTAGGATGTGCAGTTTACCTATACATTGATTTCATCACTTGCATATTATATTTTTGTCTTATTTCTGCGGCATTTAAAACTTTTTATCTAAAGTTATTCACCTAAAAATACAGAAGTGTTTAAGCCTTTATAAAGATTTTGAAAATACAGCAGAATACATCTAAGGGAGATGTGAAATGGAGGTATTTTTACCCCTGCTTCATTTTTTAATATTTCAAACTTGCACAAGACCACACAGCAAGTAAGTGGCAGATACTAGTTAAGTGTCCATGGTTTTTCATTTGGTTCATCTTTTTAAATCAAATAGGTAAATTTAATAACTTAATTATACAATGGAATCTAGAATTCACTTGCAAGATTTAATAGATTTATGAACATAATTGAATTACAAAGTTTTTTGGAACTTTCTTGGATGAAAGAGGTTAAATGTAATCCAGGATCAGCTGTTGACAGCAGCTGTCACTCACTTTCCAATCTAGCTTTCCAGATTTCAATCACATTGTATTGCATTTTGAACATTCTTGTTTACAAGATCCTGAGATATTTTGAAGTGGGGAGGCTGTGAACTTGAAGAGCACAGTGGTAGCTCAGGAGTCACAGTGTTCAACTAAGGTCTGTCAGCTTTTCACACCTGGAGTCCGAGGTGTAACTGTCCTCATTGATAAATGAAGTCAGCAACCTGTCCCAACCACTGTTCCCTGTCTGTAAAACATAGCTGGCTGCCATGGAAAAGGCTCCTTGTGGGTTCCCCTTTGTCCCTCCCTTAGCAGTGCTGGTTATGTTCATTGTGTTGTTCCTCTGTATTCCTAACAGCTGTTTCACCCTTATGTTAAAGGTGGGATTCTTTTAATATTTGGCCTAAAAAGCAAGGTGTGTAAATTGATTTTATTGATAATTGACAGAGTAGTTTGTAAAGAAGTAAAAGGCCTTTTTGTGTCTAGTTTTTTGTAGAGCACATCTCTGAATGCTAGATAATGAAATAAAACTGGTCAAGGATCCAAAAAATCTTGAATTTTTTTTATTTTTATTTTTTTAGGTTTAGCTCTGCCTGACAGATTTGTGACTGGGTAGGCTTTCCTCATTTGTATAAGAAGTTGGAGATGTACTTTATCCCACTTATTTTACAAAGTAATTGCCTATGAGAATAGTTAAAGAAACGCTAGAAAACTTACCCAAAACCCTTTGGTTTTTTCCATCTTGTGCTTGCTTCTGGGATGAAGAGAACTTAAGTGTAAAGATAGGTTATAGACTGAAGATTCTATCGAACTGTATATGCTGCCATCAGAAAGATGACAAATGTAAATTATGACACTGACAAGGCTCATGCTTTTGCTGACCACAGCCCTACAAGATAAATGAGTGCTAAACTTTTTGGTTCTTAGAACAATTTGGGAAATTGATGTCAACATACTTGTTGTAGGCGAACCGTAACTCTGTATCTAAGGTATAAGTTACCCTTAGCTATTAAAATTTTTGTAGTGAAGAACATTTTTTACCACTTGAGTCAATTCCAAGCCAAAAAATCTAGAATATATATGTATACATCAAACCTAACTTAATGCCTGGGATAAGGACTGTTCAGTCCAGTGGATTCCAGCACAGCACAAAGGGCACTTGGCAGTTGTTGGCATTTTTGCTCACAGAAATTATACTGGGACACAGGAGAAAGGTGATGACTCAGATGTTAGCGTTTGTGTGAGAAAATACAGCCTGGCCCTGGCATCACAGCCTGCTTAGTGTGGAACTTAAAACTACTTTAAGCTGTCCTATCTTTTGGAATGTGTTAGAAAGCCGGTTATAGTTCTTTTTTCCCCCAAGGTCCTCTTGTGAAAACTGTATGTTAACAAATA EMBV3_31829 GAGACCTACTACCACTTATGTTGGGGTGTCATGATAGGCCTTCCAGGGCTGACCAATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17253 AAAGACGGCTATATTTCCAATGGGGAACTCTTCCAGGTGCTAAAGATGATGGTGGGGAAC Gene GeneID:282321|PPP3R1:NM_174583:17_cdna Constitutive 0 NULL GeneID:282321 11 GENE PPP3R1 NULL protein phosphatase 3 (formerly 2B), regulatory subunit B, alpha isoform EMBV3_32596 GGCCCTGGAGTGCATGCGCAGTGAGGGTTGTCGAAGAGAAAATACAATGAAGAATGTTGG Gene GeneID:535487|INPP4A:XM_002691142:160_cdna Constitutive 0 NULL GeneID:535487 11 GENE INPP4A NULL inositol polyphosphate-4-phosphatase, type I, 107kDa EMBV3_34001 CCATGGAGCTGAAAAACATGGAGAAAATGACCTTGCAATCATGTGGACACCAATCACAAA Gene GeneID:613524|PKIA:NM_001037620:70_cdna Constitutive 0 NULL GeneID:613524 14 GENE PKIA MGC128289 protein kinase (cAMP-dependent, catalytic) inhibitor alpha EMBV3_02989 GAGCCAAGGAAGAGAAACTTCAACAAGTGATAGCAATGCACAGCCAGTTTCATGCTCCAC Gene GeneID:513985|VPS37A:NM_001046161:49_cdna UTR3_Alt 5 NULL GeneID:513985 27 GENE VPS37A MGC137205 vacuolar protein sorting 37 homolog A (S. cerevisiae) EMBV3_37376 CAGGCGGCGATGCTGAAGGTGGCGCAGATGGTCTTCGGCTTCCTGGCCACCTTCCTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17674 TCTTCAGCAAGCTCAGGAGAAACCCAAGGGGGTGCTGTAGCTCCTATGACTGGAACTGTT Gene GeneID:513504|MCCC1:XM_002684887:111_cdna Constitutive 1 NULL GeneID:513504 1 GENE MCCC1 NULL methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) EMBV3_10539 AACCCCAGGTTCTGGCTTCTAGTATTGCTGCTTGACTTTGGGCCAGCAGTTTCCCTTCCA Gene BVV0102_358509 + 1 EMBV3_28521 GK000013.2:74480364-74484100 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11616 CCCCACCTCACTCGTGACCCCCAGATTGCAGATGCAGCCTTAATCCAGAAGAAAAGGTTT Gene GeneID:512251|LOC512251:XR_083610:509_cdna Constitutive 0 NULL GeneID:512251 2 PSEUDO LOC512251 NULL similar to heat shock 27kDa protein family, member 7 (cardiovascular) EMBV3_33896 GGACAGGTCTCTCACTTCTGCCCCTAGCTATTAGATACCAGTGCTTCAAACCCTCCTCAA Gene GeneID:516155|LOC516155:XR_084564:146_cdna Constitutive 0 NULL GeneID:516155 11 PSEUDO LOC516155 NULL similar to Mannosyl-oligosaccharide glucosidase (Processing A-glucosidase I) EMBV3_17722 GAAACAACCAGAACTGCACCAAGCAGTCTGCAAAATCCAACTTTTCACATTTTTAAAACC Gene GeneID:767922|DRAM2:NM_001076996:206_cdna Constitutive 2 NULL GeneID:767922 3 GENE DRAM2 MGC128340 TMEM77 DNA-damage regulated autophagy modulator 2 EMBV3_22103 GGCCAGCAGCCAATCACCTTCCTGCGACAGGCTCTTACAGTGCTAGCCAGGGCGTCAACT Variant GeneID:618400|GPT2:XM_002694771:557_cdna 334^442 1 EMBV3_34007 GeneID:618400 18 GENE GPT2 NULL glutamic pyruvate transaminase (alanine aminotransferase) 2 EMBV3_10736 GGCCAACCTGAAAGCGTTGCTGTTTAGTCGCTATGTTGTGTCCAGTGTTTGTGACTCATG Gene BVV0102_094421 + 0 NULL GK000014.2:72880132-72882720 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052298 TCONS_00053890 TCONS_00052294 TCONS_00052295 TCONS_00053889 TCONS_00052296 TCONS_00052292 2 XLOC_031419 XLOC_031847 Coding TCONS_00052295 XLOC_031419 Coding Coding RBM12B 14:72870585-72882673 o TSS38822 8073 1 TCONS_00052295_4 984 0.135513439861266 3 0.332340531149169 0.000179529219416844 0.000319399845038498 0.000111992198693398 3.0238117076329e-05 3.40248354924889e-06 9.76558245613634e-05 0.000196374036545229 5.04128246769866e-05 9.13821341487754e-05 9.63518876091485e-05 4.16220599705514e-05 4.65073509784258e-05 1.28422514998456e-09 6.94820405149352e-05 2.97475678253847e-29 0.00159341813234588 4.15647061849074e-06 0.000466825426943943 0.000258638706049601 0.000138726236352025 4.53144031529681e-05 0.000733659093835331 0.000183065652344639 0.000340959213635147 0.000241347128486944 8.07673091100198e-05 5.27428925559975e-08 5.37857851590912e-05 1.04836463717829e-05 1.07606499359695e-15 XM_005194529.1 RBM12B PREDICTED: Bos taurus RNA binding motif protein 12B (RBM12B), 0.0 9766 100.00 0.670630496717453 NM_203390.2 RBM12B Homo sapiens RNA binding motif protein 12B (RBM12B), mRNA. 0.0 4576 82.11 0.555183946488294 TCONS_00052295_4 sp|Q8IXT5|RB12B_HUMAN RB12B_HUMAN RNA-binding protein 12B; 0.0 1648 84.92 0.998983739837398 3 coding 0 0 1 1 0.175413293783241 0.568604066015688 0.00813424529471499 0.880210068995374 GGGGGTGGGGGGGGGACGCCTGCAGAGCGCATGGGCAGAGCCACCGTACGTCCGTTTGTCTGGATCGGAGGGGAGAGAGTGGGCGCCATCTTCTTCTGGGTTCGCTGAGGGCTCTCCCGGCTCTGGGGAGGCTGCTGCGGACGAGGAGTGCTCCCCGCCCCCAGCCTTGGGGTTCCGACTCGGCGGCAGCGTTAAGTTGCTTTTACAGAATTAACAGGTCTGCAAGAAATAAAAAGGTCATTATTGCTGTGGTTTGCGCTCAGCATGGCTGTAGTCATCCGTTTACTGGGGCTTCCTTTTATTGCGGGGCCTGTGGATATCCGTCACTTCTTCACGGGATTGACTATTCCTGATGGAGGAGTGCATATAATTGGAGGGGAAATTGGGGAGGCTTTTATTATTTTTGCAACAGATGAAGATGCAAGACGTGCCGTAAGTCGTTCAGGAGGGTTTATCAAGGATTCATCTGTAGAGCTCTTTCTTAGTAGTAAAGCAGAAATGCAGAAGACTATAGAAATGAAAAGAACTGACCGCATGGGAAGAGAGAGACCAGGATCTGGGGCATCAGGGGTTGGCAGCTTATCTAATTTTGTTGAGGCTATTAAAGAAGAAGGAAGTAATTCTGGATATGGTTCTCCGATTAATCAAGATGCTGGGTTTCATACTAACGGTACAGGACATGGTGATTTAAGGCCAAGAAAGACACGGCCATTGACAGCTGAGAATCCTTACTTGTTTCTACGAGGCTTGCCGTACTTAGTAAATGAAGATGATGTACGTGTCTTTTTCTCTGGTTTATGTGTGGATGGAGTAATTTTTTTAAAGCATCATGATGGCCGAAATAATGGTGATGCCATAGTAAAATTTGCCTCATGTATTGATGCTTCAGGAGGTCTTAAATGTCATAGAAGTTTTATGGGTTCAAGATTTATTGAAGTAATGCAAGGCTCAGAAAAACAGTGGATTGATTTTGGAGGTAATTTAATTAAGGAAGGTGACATTTCTATGAGGACTGAAGAACATACACCACCAAGAGGAATTAATGATAGACATTTTCGGAAACGATCTCATTCAAAATCTCCCAGAAGAACATGTTCCCGTTCTCCTCTGGGATTTTATGTTCACTTAAAAAATCTGTCTGTAAGTATTAACAAAAGAGATTTAAGAAATTTTTTTAGAGATACTGATCTGACAAATGAACAGATTAGGTTTTTATATAAAGATGAAAGAAGAACAAGATATGCCTTTGTGATGTTCAAGACTCTGAAAGACTATAACACTGCTCTGGGTTTACATAAGACTGTTTTACAATATCGTCCAGTTTATATTGATCCAGTTTCTAGGGAACAGATGCTGAAGTTTATTGAATGTTATGAAAAGAAAAGACCAGCATCAACAGAGAAAGAGAGACTTGGACAGGTCTCACAAAAACACTCTCAAGAAGGCTACTCTGGCCAGAAATTGTGCATATATATAAGAAATTTCCCATTTGATGTTACAAAAGTTGAAGTGCAGAAGTTCTTTGCTGACTTTTCTCTTGCTGAGGATGACATTTGCTTGCTTTATGATGACAAAGGAGTTGGTCTAGGAGAAGCGTTGGTGAAATTCAAATCAGAAGAACAGGCCGTGAAAGCTGAACGTTTAAACCGACGGAGATTCTTGGGGACAGAGGTGTTGCTAAGGCTCATATCTGAGGCACAAATGCAGGAGTTTGGTGTAAATTTTTCTTCAATGTCTAGTGAAAGAATGCATGACCATTCACAGTCTTGTGATAGAGATGATCATTCCCATTCGTTTGACTCAAATGATCCACCAGTATACTCAGGTGGCCCTTCGGAAAACTTTAGGCATCAGCAAGAGGACTTGAGGCAACTGGACAATTTCAAGCATCCTCAAGGGGATTTCCGACCACCTGAAAGACGCCCTCCAGAAGACTTTAGGCATTCCCCAGAGGATTTCAGGCGGTCCCCGGAAAACTTCAGGCGCCTTGAGGAGGAACACTTCAGGCGGCCTCCTGAGGAGGACTTCAGGCGCTCTCGGGAGGAGGATTTCCGGTACCCAAGGGAGGAGGACTGGAGGCGGCCACCTGAGGAGGATTTCAGGCGACCTCCCAAGGAAGACTTCAGGAGACCCCAGGAGGAGGACTGGAGGCACCCCCCAGAGGGAGACTTAAGGAGGCCACCTGAGGAGGATTGGAGGCGGCCTCCTGAGGAAGACTTCAGGCGGCTTCCCCCAGGGGAATGGAGGCGACAACCTGAGGAAGACTTTAGGCGGCCCCCGGAGGAGGATTTCAGGCGCCCTCCTGAGGAGGACTTTTGGCGACCCCACCAGGAGGACTTCAGGCGGTCTCCTGAGGAGGATTTCCGAGGTTCTCCCGAGGACTTCAGACGGCCACCCCCGGAACACTTCCGGCGGCCGCCCCCAGAGCACTTCCGACGGCCGCCCCCAGATCACTTCCGTCGGCTGCCCCCGGAGCACTTCCGGCGACCACCTCAGGAGCATTTCCGGCGGCCACCGCAGGAGCACTTCAGGCGGCCATCCCAGGAGCATTTTAGACGACCGCCTCAGGAACTTTTCAGGCGGCCACCTCAGGAACACTTCAGGCGCCCCCGAGAGGAAGATTTTAGGCACCCACAGGATGAAGATTTCAGGGGCCCTCCGGATGAAGACTTTAGGCACCCTTCTGAAGAAGACTTCAGGAGTTCTCAGGAGGAAGATTTTAGAAGCCCTTCTGATGAGGACTTCAGGCGGCTCCCGGAGGAAGACCTCAGGGAAGCTCCAGAGGAGGACTCCAGAGTTCCTGACAGATTTAGACTTCCTGGTGAGGAGTTTAGGAGCCCCCCTGGTTTTAGAAGTCATCGTCCTTTTGTGAATTTTGGTCGCCCAGAAGGTGGCAAATTTGATTTTGGAAAGCGTAATATGGGAAGTTTTCCTGAGGGGAGATTTATGCCTGATCCGAAATTAAATTGTAATTCAGGTAGAGTAACACCTATTAAGATAATGAATCTTCCATTTAAAGCTAATGTTAATGAGATTTTAGATTTCTTCCATGGTTATAGAATCATACCTGATTCAGTTTCAATACAGTATAATGAGCAAGGATTACCCACAGGGGAAGCCATTGTTGCCATGATAAACTACAATGAAGCTATGGCTGCTATTAAAGACCTGAATGATAGACCAGTTGGCCCCCGCAAGGTTAAGTTAATTTTGCTCTAGAGAGCATTTCTAAATTGATAATTATCTCCCCACAGTATTGATGCAGTAAAATGCATTTTTAAGTGTTTATTTTTAATTATCTAGTGAAACATTTTAATTTTGATCTGTGAACAGAAGAAATGTAAATAGTAGAATGTGAATCTGGTTTTCTTTTGCTTGCAAATTGCCATTCACTTTTTCTAACTTAAAAATATATATGCTTTTTTTTTTTGATGGGGGTGGGGTGGGGTGGGTTGGGGGGAGAACTAATTCCCTGAGTGCAGTAATTTTTGTTGATGTCATGGGTAAATGTCAAGACTTGTATAAAATAGAAAACTGTGTTTGGGGAAGATAAGTTTTATGTTTACTTTTGTTTCCATTCTGTAGTCTACATTTCTACTCCAATTGTATAAGGAAATGGTCAGTGACTGATTGTTCAGGGTTAGCATTTTTATTGCTAACTGCCTGCAGAATTAATGCCCTCTTCTTTGTCTGAGATATTACTGTGTTAAGCCTCCCCTTAATCATAAGTAGCTCAAAATTGACAGACTGTGAACTTGAAGTTTACTTATGTAAAAGGCTTAGGAAATTAACTTTCAAAGTTTTTATAAAAATAAAAAAATTGCAACTGAATAGATGAACTAATTAACTTGTATTTGTATATATAGAAAAAACAATTATAGCTTCTTTTGTGAAGGTTTTCAACAGCTATATTAAATAATATGACAGGAGGGACCAGACATTCTATAATAGTATATGAGTTCTTTGTGTAGTTCTGTGGTTTATTCCAACATCTCATCAACCAAACTGATAAGATTTACTCAATACTTAAAAGACAAAAAAGTAATTATAGGTACAAGGGGACCTTCAGGTTCTTGTTGGGAAGAATCTGATAAATGGACATAGTTTGTGTTTATAGGAAGAATTTACTTATTTATATAACTTGTGGTTGTTTATTCATAATTTCAAAACTTTTTTATCTGGAGATTCAATGACTATAACAAGAATTCTGTGAGATTAAATTTTTACTTCTTTGATATTTGACACTGTAGAGATTTTGCAAATACTGGATTTGATTTTTCATACCATAATAATAATGCTAACATTGGGTACTTTGTATACGCTAGGCAGTTTAAGTGCTTTACATGCATAGTGTCATCTTAATATGCCTTAAGAGGCTTACAAGTATTTATTTCACAAATGAGATAAATTCGGAGTTTAAGTAACTTGCCTAAAGTCATAGTTAAAAATCATGAAGCCAATTTCAACCCTGACAGACTTACTCACTCCAGTTCATGCTCTTAATACTTTGGCCTACCAACTTTGTTAAATGGTAGTTTTTAATTTTAGTAAGACCATGCTGGGCTTTCTTGGTGGCTCAGTGGTAAAGAACCCGCCTGCCAGTGCAGGAGACATGGGTTCAATCCATGGGTCCAGAAGGAAATGGCAACCTACTCCAGGATTCTTGCCTGGGAAATGCCACAGACAGAGGAACCTGGCAGGCTATGTCCATGGGGTCACAAAAGAGTCTGACACGACTTGGCGACTAAAGAAGACCATGCTAAAAATATAATTCAAGAGTAAAGGATATTTTTTTACCTCCATTGTTGCTTTAAAAATAGCATTAAAAAAAAGATAAAATTAATATGCCCAAACATTGTGAATAAAAGACAAAGTAACTAGAAGTTACTATATATCCAGGGATTCTTTATGAGACAGACAATATATATTGGCTTCTAATTTAAAATTGTTCATTTTATCAAACATGATTTGATTTTGATTGGTCTTTTATAATTTACATAAAACAGTTGATTTCCCTCAATTTTGTGATAGATACTTCCCCACACTGAGCAAATAATAAAATCTGAATTTATATACAGTACTTTGGAGGGTATTGTAGAATACTTTTTAGTATTTAGCCATTTAGTACCGCAATACTCATCTTTAGTGATTTAAAGAAGTCTAAGAAAAACCAACTGAAGTTTCTGTGTTTTTAATTATGTTGAACATCCTACTTGGCAGTAAAATGAATTAACTGGTAAATTTGGTTCAAAAAAGCACATCACTATGGCACTTGAAACTAGTAAGCTCACAAGCTAGGAAAATGACAATAGGAAGAAAAGATTTTTTAAGTGCTCAGATTGTATGGTTGATTTGATCAATCTTACTGAAGTGTATTGCAAGACCTAAAAATGCTTCTCAAATACATATAAATAAATGAAAGCTGTGATGAAACTTAAGGTGAAGTATAACTTAATATGGAACTGCTTCTCAGTCTAGGCTAGGGTGGAATGGTGGTGATAATTAAAAGGCTAACAATAATAATAAGCACAGGCTTTGTATTTTGATTGTAAAATTACTGGATTGATAAGAATTCTACTCCATGATCTTCAGTTTAGTATATTTTTTAACTTTAAGTTTGCCACACAAAACTGGCTTCTACTGCTTGGGAGCCATTTCTCCACATCTGTTCACAACTTTGCCTTCAGCAACATGTTGGTAACTTAAATGGGCCATGGTAGGAGTATTTACACCATGGAAACTGGTAAGTGCAGAATATTAGGGTGTTTTCCACCGCAGTGAGCCAGTTTACCAACACACCACCAATTTCAAACACATAAAAGAGAACAGTGCACTACATCCTCATAAACCCATTGCCCAGCTTCAATAATTATCTCATAGCCAGTTGTGTTTCCTCTCCTAGATTTATTAGGTATTATAGTGGCATATTGGTTATCAAGTTTAATACCCAGTGGCATTTTAATTATCTTAAAGCCAAACATTTTTGATTTGAGGCATCTGAAAAATATAGATCATGCCTAGAAAGTAAGCTTAATCTCATAACCAAGAGATAGTAAGACTCCTTAGGAGTGCACACTTACACACTTACTGACAATACTGTCATGAGCATTGGCTCTTGGTCCATATATCACCTATTAAGCAGTGACCCTATCACCTCCATCTCTGCATAAATGTTAGCTAATATTTAGTGAACTGTAATAGGTACTACATGATCTTTATATATGAATTAACTATATAGTTCCAGTAACCCTAATATATCTATTTTGGAGACAAATGGAAGCCTATAACCAACTAACTAGTCAGACTGGTTGCCTGTCTTTTTATAAAGAAGCTAAAAAGAGGTTTTTATATTTTAAAATATGGTTACCTAAGTATCTATGTAATAGCCTTGATTCTGTCCCAGCTCACAAATTGTAGAAATAGTTACTTTATAACCCTTTTAAGACTTTCCCTTGTGGCTTTAGTGGTAAAGAACCCCCCTGTGAATGAACCTGTGAATGGAGGAGATATGGGTTTGATCCCTGGGCCACGCAGATTCCTTGGAGAAGGAAATGGCAATCCGTTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGAGTCCTGGTGGGCTACAGTCCATGAGTCACAAACACTGGACACAACATAGCGACTAAACAGCAACGCTTTCAGGTTGGCCAACCTATTGCTGGCCTAAAAATTAATTATACAGTTAAAGTATTACATGTAATAGTCCTTTTGTTCTTAGAATATTTTTTTTAATAGAGCATACATTTTATATCATAATTTGATTGCTTTAAATATCAGACACTATTTTAATTTTACAAATAGGGCAACTGATGCTCAAGTGAGTTGCGATCATAATCTGCAAGAGAAATACTACAACCTTGTTTTTTTGCCTAGTTACAATACCAAGATTAAATACAGAAAATGCAATGACATCCTCAGTTTTTTATGAATGTAAATTATTTGTGCATGCTGTGTGCTAAGTCACTTTAGTTGTGTCCGACTCTGTGATGCTGTGGACTGTAGCCCTTCAGGCTTCTCTGTCCATGGGGTTCTCCAGGCAGGAATACTGGAGTGGGTTGCCATTCCCTTCTCCAGGACATCTTCCCAACTCAGGGATCAAACCAACCTCTCTTAGATCTCCTGCATTGGCAGGTGGGTTCTTTACCACTAGTACCACCTGGGATATTTATTTACAGTTTTAAAATGTTTTGAGTATTTTATTAAGTAACTATATCACTTAGGGCTATTTTCAGGAAGCAATGCTTTGTTAAGAACAGACCATGAATAACAAAAGTCAGAAAAGCATTCTAGAAAAGTATTTTCTGTTATGAACAACTGCTTTTTGTGGTAATCCCAGATAATATCAATTTCCTGATTTTTATATGCCAGACTTGGATCTATGAAATAATGAGAAGTACAATTCTCCATCCAAAGAAATAAAAGCATCAGATATACTGAAAGGCTCTGATTAAATTGTTTTCTATTTTCAGGAAAGAGAGTGACTGTGTACTCTTACTGATTATATGGTAGGCTGATAAAATATATAATTTTTTACCGATTTATGATTGGCTATATTCTTTAAGGGAAACATTCCACCAAATTCTAGCTTTCCAAAGGTTGTGGTGCCATATATAGTGGTTTACTTTGACAGTGGTTTTGTTTTAAAACCAGAATTAAGCTGAATGTAGCTTTTTAAAGCTAAAATTTATGCTTATGTATAGTTGTAAAACACTGATAGTGCCCTATTATTTGAGAGTGACTGTAATACTCTTGTTGAAGAGTAAATTTATATACTGAATAATGAAACTTTAGGTTATAGTAAAAGTGAAAAAGAAAGGAAAAAGAACACTTGTCTTTTTGATGAAAGCTTTATGGAATAAAATTTGTATTTAATCAGAATGACTACCTAGGACCCTTTTCTGATGTTGAAAGCATGGCGTCTTAATCTAAAGGAAGTGGAATCGTTAAATCTCTTTTTGTGATTTAACTAGGTTAGTGTATGTGAAATACTTCCAAAATACATTGTTTTTTAAAAACAATGGAACCTATAAAAAAGATAGTATG TCONS_00052299 s 5' 0 TCONS_00052299 s 5' 4279 EMBV3_35467 ACAGGACGACACGCTCACAGAACACCTGCAGAGCGCCATCGACAGCATCTTGAACCTCCA Gene GeneID:531868|LOC531868:XR_084615:853_cdna Constitutive 0 NULL GeneID:531868 18 PSEUDO LOC531868 NULL similar to glioma tumor suppressor candidate region gene 1 EMBV3_43510 GGGGAGACCTTGCCAAGCACTTTGGAACTCAAATCAAGAGTCTGTATGAGAACACCCAGG Gene GeneID:514159|ACSL5:NM_001075650:42_cdna Constitutive 1 NULL GeneID:514159 26 GENE ACSL5 MGC138948 acyl-CoA synthetase long-chain family member 5 EMBV3_07137 GCCGTTGAAATTGAGCAGGAGTTTTTAACAGAAGCCTTGCCAGTTGGCCTCATTGGAATG Gene GeneID:528960|RRM2B:XM_002692761:109_cdna Constitutive 0 NULL GeneID:528960 14 GENE RRM2B NULL ribonucleotide reductase M2 B (TP53 inducible) EMBV3_42411 GCTCCTGGTACTTACACAGCAGCTTCCCACTAGCTATCTAGTGGTGGTATATATATGTCC Gene BVT0102_061641 + 0 NULL GK000029.2:24616791-24684058 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164709 TCONS_00164724 TCONS_00164710 TCONS_00164717 TCONS_00164721 TCONS_00164713 TCONS_00164707 TCONS_00164712 TCONS_00164718 TCONS_00164716 TCONS_00164708 TCONS_00164711 TCONS_00164720 TCONS_00164722 TCONS_00164714 TCONS_00164719 TCONS_00164723 TCONS_00164715 1 XLOC_100287 Coding TCONS_00164724 XLOC_100287 Coding Coding PRMT3 29:24682671-24824722 j TSS123167 4383 1 TCONS_00164724_6 445 0.0730093543235227 18 0.969271383315734 1.94472389684863e-17 0.000232193782377162 0.00026894900630935 5.12504140751459e-05 0.000464066736400274 0.000117389314082511 0.000306557020440586 5.27074675992379e-10 0.000317238670641199 0.000104332985034434 1.37977281487851e-40 6.50875539456582e-05 8.21765307158236e-18 5.37738663417142e-30 8.31744441888419e-22 0.00177205338059765 1.44708359241883e-06 5.18660993846782e-08 0.000676481554893592 0.000757050762546991 0.000227714613329006 1.09554762837655e-25 4.42883106444015e-21 2.3235541892508e-05 0.000702913938986987 0.000955098994498678 0.000523263866222325 0.000447179564471015 0.00016890511037516 0.000533530758783977 XM_005226757.1 PRMT3 PREDICTED: Bos taurus protein arginine methyltransferase 3 (PRMT3), 0.0 2567 100.00 0.324435318275154 NM_005788.3 PRMT3 Homo sapiens protein arginine methyltransferase 3 (PRMT3), 0.0 1214 78.55 0.321013004791239 TCONS_00164724_6 sp|O60678|ANM3_HUMAN ANM3_HUMAN Protein arginine N-methyltransferase 3; 2e-130 391 89.69 0.496629213483146 0 coding 0 0 0 0 0.261475321720916 0.164567857052004 0.0183348070249287 0.768979980744587 CAGATGTCCCGGTGCGCAGCGCTGAGCGCCGCGGTTGCGGCGGGGGTGGCGGCGCTAGTAGCCGCCTTGCTCCTGCTGCAGCCCGAGGACGTGGGGCAGGGGGCCAGCCTCAGCATGGCCGAGACAGAAGCCCTGCCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTCTGGGCGCCAGCGGGGAAACCGGCAGAGTGCTCTTGAAAGAAATTCTGGAACAGGGCCTGTTTTCCAAAGTCACGCTGATTGGCCGGAGGAAGCTCACGTTGGACGAGGAAGCTTATAAAAACGTGAATCAAGAAGTGGTGGACTTTGAGAAACTGGATGACTATGCTTCTGCCTTTCAAGGTCATGATGTTGGATTCTGTTGCCTGGGTACCACCAGAAAAAAAGCTGGGGCGGAGGGATTTGTCCGTGTTGATCGTGATTATGTCCTGAAGTCTGCAGAGCTGGCGAAGTCTGGAGGGTGCAAGCATTTCAACTTGCTCTCCTCTAAGGGAGCTGATAAGTCAAGCAATTTTTTATATCTGCAAGTCAAGGGGGAAGTGGAAGCTAGAGTTGAAGAGTTAAAATTTGATCGTTATTCCATATTTAGGCCTGGAGTTCTCTTATGTGATAGGCAGGAATCTCGCCCAGGTGAATGGCTGGTTAGGAAGTTCTTTGGCTCCTTACCAGAATCTTGGGCCAGTGGGCACTCTGTGCCAGTGATAACTGTGGTCAGAGCAATGCTGAACAACGTCGTGAGACCAAGTGACAAGAAGAAGGAACTGCTGGATAACAAGGCCATCCATGACCTGGGGAAAGCTGATGACTCTCTCAAGCCATGACCACACTGGAGAAATTTTTTTTTTTTTTTTTTTTTATTGTCAGATTCAACACCTACCAGCTAATTGGCGCCGCGGAGGAGGAGGACCCGCCAGGCCTGTCAGACAGCGGAGATGAGGCCAGCTGGGAGGATGAGGACGACGCAGATCTCCCCCACGCCGAGCAGCAGACCCCTTGCCTGTTCTGTGACAGGTTATTTACATCTGCTGAAGAAACATTTTCACACTGTAAGTTGGAGCATCAATTTAGTATTGATAACATGGTTCATAAACATGGACTTGAATTTTATGGATACATTAAACTGATAAATTTTATTAGACTTAAGAATCCTACAGTTGAATATATGAATTCCATATACAACCCAGTGCCTTGGGAAAAAGAAGAATATTTAAAGCCAGTATTAGAAGATGACCTTTTACTTCAATTTGATGTAGAAGATCTTTATGAACCGGTCTCAGTCCCATTCTCATATCCCAATGGGCTCAGTGAAAATGCGTCTCTTCTTGAAAAATTGAAACACATGGAAACTAGGGCACTATCTGCTGAAGCTGCATTGGCTGGAGCACGTGAGGACCTGCAAAAAATGAAACAATTTGCTCAGGATTTTGTGATGAACGCAGATGTCAGAGCCTGCCCGTCATCTACCACTGCCATTGCAGATCTCCTGGAGGATGAGGATGGTGTTTATTTCAGCTCCTACGGGCATTATGGGATACACGAAGAAATGCTCAAGGGCTATTTTCTTCTCTTTGAGTCTATGTTAGATTCTGTCCTTTATGCAAAGAACAAATACTTGGCAAAAGGAGGATCGGTCTACCCTGATATTTGCACTATCAGCCTTGTGGCAGTAAGTGATATGAATAAGCATGCTGATAGAATTGCTTTTTGGGATGACGTCTATGGCTTCAACATGTCCTGCATGAAGAAGGCAGTCATTCCGGAGGCTGTGGTGGATATTTTAGATCCAAAGACACTTATTTCAGACGCCTGTAGTATTAAGCATATAGATTGTCATACGACATCTGTCTCAGATTTGGAATTTTCTTCAGATTTTACCCTAAAAATCACAGAGACATCATTGTGCACGGCAATTGCTGGCTACTTCGATATATATTTTGAGAAGAATTGCCACAACAAGGTTGTGTTTTCTACGGGCCCACTGAGCACCAAAACACACTGGAAGCAAACAGTATTTCTATTGGAAAAGCCATTTTCAGTTAAAGCAGGTGAAGCCTTGAAAGGAAAGATCACAGTGCACAAGAATAAGAAAGATCCACGTTCTCTCATTGTGGCCCTCACATTGAACAATACAACTCAAACTTATGGTCTCCAGTAAAAAGGCTACAAATGCGCCAACTAATCTGCAGCTTTTATGGTCGGGGAGGGGCGGGCAGTAGGGGAGGAAGCTTATGTGAACACATGGATGTTGAATCTTTGAATCTGGTAATTCAGCTACGGAGGGAACTGATCCTCGTGATCCACCTCTGGAATCACATTCTTGAAAGTCTGGTCAGTGAGATTTAACAAAATGTAATCCCTGCATTGAGTTCAGCTGTATTGAAAGTCATTCAAATTGGCCTAAATTTGGAACAGAGGTATAATCTTTTGTTGTTTTTAATAATTTTCTTACTATAAATTTTAAGCACTAGTAATTGTTTTTTGGATAATGTTTTATGAAACTAGTAACTGTACACAAGGTATTACACATTTTATTGAAAATTTCCTTTCTAAGAAATAGTCTTAATTGTATCTGCTAGAATATCAGGATATAATGTAGAGCAAGTGTAAGGAACTAAAATGTGGAAAAGAGACCACACAAACTGTATTTGAAATCAGCTTAGTTGATTGTTGTATATAATTCTGTTCTCATTTTTTAGCTTCTTCTCTCTTTGCAAATATTCTTCAGTCATATAGTTTTCTATTACTGCCCAGGACATCTAGTTTCAATACATTTGCCCTAGATTAAAAAAAAATTTTTAAAGATTGGGATAAATATGTATTTATTTACTAATCGTTTTTTTCAAACTAGATTTATGTACAAAGTTAAACATGTAACTGTTAATGTACTTTTATCACTTTATACTCTTGTGTAATTTACAATTATTGACCCAGTTTGAAATACAGAAAACATTCAAATAAACGTATACAACAGCCATTAGTATTATAAAGTGACATTTCCACATACCAAAGCCGTTTACAAAATTAGAAGCATTTACAACAAGTCTTAGCAAAGGAATCATTTTTAAGAAAATAGGAATTTTAAGGCGAGGTGGATCACATGGTTCATTTCCATTCATCAGCTGGTTCATTTTCACAACAACACACACACAAAGCAGCATAGCATTGTGTTGAGAAGCATGAATTCTGGAGCCAGTTCAAGCCTTGGCTGCAGCTCTTACTTGCTGTGTAATCCTATGTTCCTTAACCTCTCTCTCCCTCCATAAATGTGCCAATTCATGAGCTGATACATTTCAACTACTGAAATGTGTACATTTCAACTGATACATTTCACAACTTCTATGTGCCTAGTACATAGAAAACACTTAGTCCGTGCTCAGTGATATCATCATCACCAGTCAAGGACCCCTTCCAAAGACTGTAGTGGCATCTGCATTAGATCAGTTTGAGAATTGTCAACCTTATGAGATACTACTGTAGTGTGTGAGTGAGTGGGAAGATTACAAGAGAATTTAATATTTATTTAGCAAAAAAATGCATCAAAAATAAACTGTCTTTTGGTCTTCAGTAGAAAACTGGAGTTCCAGCAATAGGAAAAATAGCCCCATCAAACGATGGTATTTCAGACCTTAATGTAAGTCTTTCTTCTTCATAAGCATGGTTTCTTTTTTCACTGAGCCAAACTAGTCAGCTTGTTTTCACCATGGTTTGGATTCCGGCCACTACTGGAAATGTGTACTGCTGCTAATACAGCTCAAAATGTTTTAAATTTCTGTCTAGGGTGTTTCATGTAACAATTTGAGTAATGGGATGATGGATCAAAAGTAAAAAGACTTACCATTAATTTTTAAAAAATTTTTAATAGCATATACTTCCTTTACAATGTTGTGTTAGTTTCTGCTGTACAACAGCGTGAATCGGCTATATGTATATATGTCTGTCTGCTCCCTCCTGCCCCCCATCCCCCTCTGGGTCATCACAGAGCCCCGAGCTGAGCTCCTGGTGCTTACACAGCAGCTTCCCACTAGCTATCTAGTGGTGGTATATATATGTCCGATTTACCATATATGAAGATTTACCATTAAATTTTTAAAGTAACCGAAAAACTTTTTTTTTTGTTTGTTTTTCTTTCTTAACAAGTATTTTTTACTATTTAAAAAAGTACTTCTCAAAAATGATTTCTCATTAAAAGTCTTGTTTGATTTTCAGGGGATTTTCAGCCAGTGTCTCTTTTGATATTCTCCTCCTGGTAGCCTCCCCAGGCTGGAACATCCCAATTTGTGTACCTAAACATTTTCTGAGATGTGAGAGTCTGAATATTAGCTCTTTGGTTAGAATTTCAGCCATTAAACTGCTATAGAAAA EMBV3_09459 CCTGGCATTTACAGGCCTCCCTGGATTAGGGCCAAACCTGATACGATAGGCGATATAGAC Gene GeneID:614026|RANBP9:XM_002697582:445_cdna UTR3_Alt 2 NULL GeneID:614026 23 GENE RANBP9 NULL RAN binding protein 9 EMBV3_09595 TGTGGACCCAAATCACCTTTTGTTGTCGTTCAGTTGCTAGGTCGTGTCCAAGTCTTTGCC Gene BVV0101_015471 + 0 NULL GK000016.2:44012878-44017895 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07353 GTCCAGTTTCCCTTGTGGGAGTCCTTAAAAGTGGCTTTGCAGCTGCAGTCACCACGCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11709 GCATGATGAGTGTTAGAGCAGGAAAAAGACAGAGATGTGGAAGCAGACAGTAGGATGACC Gene BVT0102_042015 + 0 NULL GK000016.2:75800035-77046044 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070268 TCONS_00070271 TCONS_00070270 TCONS_00070269 1 XLOC_042179 NonCoding TCONS_00070268 XLOC_042179 NonCoding NonCoding - 16:76883969-76936706 - TSS52213 7043 5 TCONS_00070268_18 119 0.461451086184864 3 0.866504854368932 0.000476618895711895 0.000325340807229102 0.000326254567115106 0.000371934689691659 0.000231861611949707 3.5710941481234e-05 5.94243817122741e-05 0.000575586123737952 0.000279049194513698 2.32648001698248e-05 1.36852752978375e-06 2.39424703427276e-05 5.41253491402244e-05 9.25866620547594e-06 1.92637296086979e-06 0 3.21050268036609e-10 0 0.000860973874046729 0.000741870061821416 0.000237743031619449 0 0 0 0.000354930585043916 6.20732126195748e-05 0.000458911864627745 1.17020193374642e-05 7.15689924451949e-13 0 XM_005192631.1 LOC101902027 PREDICTED: Bos taurus uncharacterized LOC101902027 (LOC101902027), 0.0 904 100.00 0.0709924747976714 0 noncoding 0 0 0 0 0.0766868387518941 0.468531979008895 -0.0604456789211507 0.292698989245471 GAGGCAAAGATTCTAGACTGGACTGTGATGTCTTAGGTAAAGCATGTTTTTTAATTATTTATGAGTCAGTTTTACTTCCTCTAAATTTGAGAGCATTTGATTCATTCATTTATTCATTCTCCTTAATATATGCTAATTTATATCCAGTGCTGTGTGGGGCTGTGTAGCAAATACAAAGGGAAGCAACAACAACATTTTAAATCACTCACTCAAAATATGCCTTTCTATGCAAAGTATGCTGAGTACCAGCAGTACTGGCATCACTCGGAAGCCTGTTAGGAGTGCTTGAGTTCCACTCCAGACTGTGAATCAGAAACTGCATTTGACAGGATCCTCTCACTGATTTGTGCACCCATTAAAGTTTGAGAAATACTGACGATGTGGATAACACTGTCCTCTGCTTTAGTACACATCATCTCAGGATACACGGTCCTCTCCATAAGGGGCTCGTAATCAAGGATGAGAGAAACGGATTCTGACAGATCCCCATTCGACAGTGTAGGGAACATCGTTACAGAGAAGGGAATAGGATATGATGGGAATTCAGAGGAGTAAGTGATAGCCTGTGCCATTCTTTCAGTCATTCATTCTAAAAAGACTTGAACACTTGCTGTAAGCCACGTACTTGACTGCCTGCTGCGAAATGCAAATAATGCTAGAACTATTCTATTTTTACGGAGCTTAACTTCTAGTGGGTAAAGACAGGTAATAAACAAGTATTATGCATAATTCCACATAATGATGAGCGCTGTCAAGGCAATAAGCAAGGTAATATGATAGTGGCTAGGGTGAGGGGGTGGGAGCTACCTTCCGGCTTGGTCCAGATATGCCTCTTGGAGGAGCTGAAATCTACATATGATGAGGAAACCATCACGAAAGACCTGAGCTGTGGGGTTCGGGAGAAGAAGGTGCTGGGAGGGTGGACAGAAAGAGGCAGGCTTCATGGAGCAGAAGAGTCTGACCTTATCCTGGTGCAGCAGGAACTGTAGGGAGCTTGGTAAGAGGTGAAAGCATAGAAGCTGTGAGGAGCCGGCTTTTGTAGGGCTATGTGGGCAGTGGTGAGGGTTAGAGTGAAGTTTCCTCTGAGTGCATTGGTAATAATACACATTGATATATAATTAAGACACAGAATTTGGCTGTTGTGTGAAGACTAGACCATGGGTAAGGTGGTCAGCGGGGAGACCAGGTAGGAGGCTCCGGCAGAAGTGCAGGCAAGTGATAACTAAAATGGTAGGTGTGGACACAGAGAAGTGGGTGGATTGGGGATACATTTTGGGAGGAGCATCAAAAGCACCTGGGAAATATCTTTCAGGAGAGGTTATAAGCTAATGAGATGGGCTTTGAAGAATAAGTAGGGATTCCCTAGGCAGACTTTCAGATTCTAAGCTTAGAAGACAAAGAGTCTGGGGTCACGTATTTTGGAAGAACAAGTGTCCTTCACAGCATTCTTCTAAAAAAAAACAAGGAAAAATACTCTAAAGTACATATTTCTCATGGCTATACACTTATTTCCATTCACAATGACAGCCCTCAAATGTGGGGTAACTTTCCTCTTTTCTGAGCAAGGTTCTCCCAATCCCTCTACCAAGCTCCATATTTCAAAGACCGCACTAAGCACTTGGGAGAAAAGAAAGGTCTCTCTTTTTTCCTTCCAGTAGATCAGTGGTTGGTCCTAGATCTGCTTATGTACACCTTCTCTTAGAAGAGACTATTTTGGTCTTGTGAGCAGTATGTTTTCAGTTCTAAACTCCAGAGCTGCCCCAGAAACCACTCAATCCAACCAGGAAAATAAATGTGAATATCACTAACTCAGCAGCCTGGCAGCTGCAGACGATCCCATTATGTCAATCACCATCAGCAGTTCACTGTAACTGGTGGGCTGTCATTCTCCTGGAGATTAATTGCTAGGAACCTGTGGTATATATTAATAGATCATTTATTCAGATTGATCTTTCACCCATTGATCTTCAATCTCTGCACATGGCCAGGTAGCTATCATTCTGCGATCTGACTTCTGGGGCCAATCTTTACTCTAAAAGACCCTCCTGGGATTTCTTAGCAAGCAGAGTAGCCCCATGAAGGCTCCAGGTCCACAGACCACAGCTGCAGTCAATCTCCTTCCCTCTCCAGAGAGCCAAGATGTGCTGCTGCTTCCTGCCTTTCTGCAATTTGATGTTTCGTATCTTAAGCTCCAAATCTGCAATCAAAGCACTGCGGTCAGGGTGTGATCTGAATCACCCCTTGAATAGCTCTACACCTTCCTTCTTATAAATGTGAGCTCTTTCCTCATCCCCCTGCTTTCTCTGTGCCGCTCTCATCATTGGACCAGAGAGAGAACCCGAGGTTCACCCCAGTCCTTCAGCTGCTGCTGCTGTTAAGTCACATCAGTCATGTCCAACTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCTCCATCCCTGGCATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAAAGCTTGAAGGTGAAAAGTGAAAGTGAAGTTGCTCAGTGGTGCCTGATTCTTTGCGACCCCATAGACTGCAGCACGCCAGGCTTCCCTGTCCTTTACCATCTCCTGGAGCTTGTTCAGACTCATGTCCATCAAGTCGGCAATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAGTCTTTCCCAGCACCAGCGTCTTTTCTGATATGTCAGCTCATCGCGTCAGGTGGCCAAAGTATTGGAGCTTCAGCTTCAGCCGTCTGTTATGGGCTGTATGCATATGTTGAAGTTTTAACTCCAATATCTCATCATGTGCTGTCTTTGGAGATAGGGCCTTTAAAGAGATAATTCTGGTGAAGCGAGGTAGGCTCTAATCCAATTGGACTGCTGTTAAGGATAAGAGCAGATTAGCATACGGATGTGTATACACGTGGCAGAAAGACCATCTGAGGACATAGCGAGGAGGCAGCCATCTGCAAGGCGCGGAGAGAAACTCAGAGCGGAACCAACTCTACTGACACCCTGATCTTGGACTCCCAGTTCTAAACCTGCAAATAAGTAAATTTCTGTTGTTTGACTCACCTAGCCCATGGTACTCTGTTATGGCAGCCAGAGCTGATGGGCACACCATCTTTCAAGTCTCTTGATAATCACACCTTTTCTAAAGAATTTCTTGAACTCCCTGATTAGCTTAGGTCATCCTACTGTCTGCTTCCACATCTCTGTCTTTTTCCTGCTCTAACACTCATCATGCTACATTATAATTACTAACTTAATTGTTCGTTTTAAACAGTCTGTCAGCTCCACAAGGCCACGGTCAAGTCAATCTTGTTTATTCCTTTTCTAGGTATGAAAAACAACCCTAATTGTTGTGGCAGATAAACCTACACATCTCAGCAACTCAGCACAGAAGTCCATTTCTCATTCATATCACAGTCTAACCTGGCCCCAAGATTCAAGGACTCAAGTCTCCATCTGTGGCTGCATGTTCCTCTGGATCCCTGAAGGACTTCTGATTCACCTGGTAGATGTGGAATGAAAAAGTGGTCATTGGTGGGAGGTTTCTACCAGTCAGAGTAGAAAGTGGAGTGCCTCACTTCTGCTCATGTTCCATTGGCCAGAACTCAAGCCACATGGCTTCATGTAACTGCAAGGGAAGCTGGGAAGTGTAGTCCAGTTGGATGCTCAGGAAGCAAAGGAGAGCATGGATATTGGTGAACACTAGGAATTTATGCCATCTATCTCTGGCACCAAACATAGTGTCCAAGTCATAGTAGGTACTTTCAGTGCAGTCTGTTCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCAACTCCTGGAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTTACATCATTCCCTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGCGCTCAGCCTTCTTCACAGTACTTTAGCAATGTTTTAATTAATTAACACATTAACGTCCACAGGTCATGCACTGCGCCTTAGATGAAACTCGGATAGGATGGTTTAGAATCACAGGCCCAACTTCTCTCCTTGGGGCATGCATACATGCTTAGTTGCTCAGTCATATCTGATTCTTTTGCAACCTCAGGGACTATAGCCCACCAGGCTCCTCTCAAAAATCTCTATAAAAGGAACAATCCAAATAAAGGACGTTGTGTCATCTCCAGCTTCTTAACAAGAACAGGCAGCTTAGTATGTGTTTTTGCCATTTTGCTGCAGTTATTTGACTCTGAGTTATTGTCCTCTAAACTCCTGCAGAGTAACACATTAGCCATCTGCGTAGACAGCTTCAAGCCCAGTGTCTGGTACATCTTCAACTTCCTTTCAGCCAACATTTATTGAGCATTTACTATATGCTGTGCTAAGTGCTTTATATCCACAAACTCATTCAATTTTCCCATGGAGTAGCCGCAACGACTGTCTGCTTTTCAATGTCACGAAACTCGGTGCCCAAAGAGCTGAAGATAACTTGCCCAGCATCCCAGAACCAAGTAAGTAGTCAAAGTAGGCTGTAGAGTCAAGTACCTACGATTTCAAAGCTCTGGCTTTTAAAGCTGCCTCTCCTGCTCATTGAGAGGAAACTGGTCATGGACATGAGAAACGAGGTTTGCCGGCTTTGCGAGCGGGCGAATACTGCACTGCTTGGCCATCATCTTAATTTTGAGAGTATGTATCTCCTTGCTTCCTTGAGAAAGGGCTGCCTTTAATACCTCTTAGAACATCCAGCACAGAGCCCTCTGCAAAGAAGATTCTCAATGTATGTTTCTGTTCTCTACAAGGTTTTTGAACCAGGACCTAAGACAGGGAAGGAACAGCCAGCTTGCCTCTGCTGACGTGTGAGTGTCTCCCTCCGCGAGCACCTACTCACACTCCGCCTTTACCCCTGCTCAGCCACCCGACCCAGAGCTCTTCTTGGAGGACTTTCTCTTTCTACAAACAGCAGGGACAGATGGTGGCTCCTAGAATACTTTGTGAGCAAAGGACACTTCTTCCCATTTCTGAGATGGATGTTGATGGTACAGGGAGGAAGCCAGAGGTTTCTGATGGGATTTTACCTTGAGATTTAGACAGAAAAGAAGAAAAATTCACAGTAAATCAAGTCCTCTCAGGAAATACGACATATGTATCTGCCTTCCTAGTCATCCTCCTGCATTCTTCTGAGCCCAGTTCTTTCAGAGTCCACGGCTCTTTTCTTGCAGTCAGTGAAGCCCAGGAGTAGTGGTACTCAGTTACTACTGCCACGGTTACAGCTCCTGGGAAGCAGAGACGGAGGACTATCTGAATCCTTTCTCAAATTCATCCTGTAATAAAAAAAAAAAAAGAGAGAGAAAAAAAAATAGTTGGATACATTTTGCCCAGGATATTTTGTTAGCGGGCTTTCCTGGCAGATAATTTACCAAAAAAAAAAAAAACAAAAAAAAGGTAAATAATTTAGTGTTCTTTTTGCATCATTTGGCACAAGCGAAGCCCCCTCCTGTGTGAGCACTTGGTTGAATTATTTCTCCCGACTGGCTTTCCTGTCCCTACAATGAGGAAGGCTGCAGGGCTCCAGCTGGAAACGGTAGGGAGCTCAGGCTCTGCTGTCTCACAGATGCATGGGGCTCTCTCTTCTCCTTCAGGTAGAGGGGCTAGAGCGGGCATAATAAATAAGGGAGGGGCGGGTCAGGCAACGTGGTAGGTACTTGTGCAGATTTCTTTTTTTGGTGAGGTGAGAAGAATGAGGATTTTCAGCAGCTCCAAGGAGATCCTGAATTGGTCCATGGCTCCTCCATGTATAAGGAGAGCTCAGAGTTTTCAGTGCTACATGAAGTCAAGCTTGAGCTTGGTAGGAGCCCCTTGGGGAGAGCAGGTACAGAGGGGGCTGAAGAAAGATGTTCTCCAGTCACCCCAAGTTCATTTCCACTTCAGGCTGAGGGCCGAGGGGAAGCTCCGTCTCATCTGATTTGGTTTAAATCGAGGTCATCCATCCCAGGTACTCTTGGTAGTGGTTGCAGAGGGAAAAGGACATGGTGGAGCTCCGAGAGCCTCTGCTTGGAAGTGATGTCTATCGTGTCTGCCTACATTTCATTGGCCAAAGCAAGTCACATGGTCGCTCAGGAGTTGAACAGAGCTGCCCCAGGTCTCAGCTGAGGCACTCAGGCTCGTCGATGTTCACTGCGGCGTGCGGGATCTGTGCTGATGGCCTGTGACCTCTTTCTTCTGCCACGTGGGCTCTAGTTCCCAGACCAGGGATGAAACCTGGGCCCCCTGCATGGGGCCCGGGAGGTCTTAGCCACTTGACCACCAGCCACCGTCCTGTAGACTGTCAATCATTTCTAGCTTCCTTGTAATACCTAATGCAGCCTAAATGCTATGTAAATAGTTGTAAATGTAGTGTAAATGCTATGTAGTTTCCTTTGCACGGCAAATTCAAGTTGTGCTTTTTGGAACTTTCTGAAACTGTTTTGAAAAATACTTTGTATCTCTGGTGGGTTAAATTTGCAGATGCAGAAACCCTGGATACAGAGAGCCAACTGCATTTCCAAAACTGTCCAGTCTTCTCGTCCGTTTCCCAGTGACTCTGAAAAAATTCTTAGGCGTCTCAGCTTTTAAAAGCAAACAGACAAGGCAGAAGCAAGGCAGCATGGTCCTGCGTCTCTTTCCATGCCCTCTGCTTCATGCTTCCTTCCCAGCCAACTTCTAGGAAGAATCCTCCACCCGCTCTCTCCACTTGCTCACCCCCTCCTTCAGCCCTCAGTCTCCTACCCTATTCTCGCTTCGCACAAAT TCONS_00068324 TCONS_00068325 r 5' 161422 TCONS_00068324 TCONS_00068325 r 5' 109339 EMBV3_15786 GTCCAACACGGCCATCAAGGGGTCGGACAGAGCAAATGGACGAGCTGCTGCAGACGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06710 GAGACACACAATTCTAAGTCAGACCATTGCCCCCACACCCTCCCTGCCTTTTCTTTAGAC Gene GeneID:781073|JPH4:XM_002690502:472_cdna Constitutive 0 NULL GeneID:781073 10 GENE JPH4 NULL junctophilin 4 EMBV3_10105 CAAAGGTGGTGTACTTGTAGATCCCATCTTGCCGTATATCGAGTTAAAGGCTTCACGAAG Gene BVT0102_094923 + 0 NULL GK000027.2:18309257-18328725 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156082 TCONS_00156074 TCONS_00156073 TCONS_00156080 TCONS_00156092 TCONS_00156083 TCONS_00156084 TCONS_00156089 TCONS_00156076 TCONS_00156091 TCONS_00156077 TCONS_00156086 TCONS_00156093 TCONS_00156087 TCONS_00156072 TCONS_00156094 TCONS_00156075 TCONS_00156078 TCONS_00156088 TCONS_00156079 TCONS_00156081 TCONS_00156090 TCONS_00156085 1 XLOC_094913 Coding TCONS_00156089 XLOC_094913 Coding Coding PCM1 27:18326939-18417992 j TSS116662 8802 1 TCONS_00156089_8 2095 0.0111338332197228 41 0.903780257435312 0.000942014493705269 0.000681120724303375 0.000573231576001969 0.000551490356258967 0.0010152908323515 0.000259316787134655 0.000420433162134615 0.000159885413415904 0.00108836885491348 0.000439339055336371 0.000146274591810484 2.19598787813014e-05 3.13474928426968e-30 1.15776124007172e-13 8.22712660022651e-06 0.00230211776340142 0.00132376812105824 0.00428718981328217 0.00127306561122785 0.00110776387418142 0.000333303938327901 0.00180373270240541 0.00219926635125726 0.00278365083087669 0.000183080685241971 0.00113693105301469 0.000868408755806832 1.62577182669412e-06 8.16597584217005e-05 9.32718108987723e-07 XM_005226022.1 PCM1 PREDICTED: Bos taurus pericentriolar material 1 (PCM1), transcript 0.0 1.400e+04 99.24 0.890024994319473 NM_006197.3 PCM1 Homo sapiens pericentriolar material 1 (PCM1), mRNA. 0.0 7728 86.90 0.719722790274937 TCONS_00156089_8 sp|Q15154|PCM1_HUMAN PCM1_HUMAN Pericentriolar material 1 protein; 0.0 3511 86.12 0.999045346062053 0 coding 0 0 1 1 -0.101363186483082 0.726382192991134 0.0201930695273464 0.710477558376583 CCTCTTCTCCCACCACAATGAGATCCTAAGATGGCGGTGGCTGCGGCGGTTGGCGCTGAGGAGCTGAGGTAGACGAGGCGGCCATTGGGCCCTAAGCAGCCAGGGAACTTGGGGCTTCTCCCTGCTGCGGTCTCTAAGGGCGGCCCGCTGCCGGTGGCGGGTCGTGGGGGCGCTGACCGCTACTCCGCTTTTGGCAGGAGCGGCTGCTTCGTTTACAGCACACAACGGCTTTGAAGTGTGAAGCAGGAAGGGAGCTGTTTCTGAGCTACGAAAACTAGATTTTAAACAGAAGATTAATTGTAAAAGCCAGTATGGCCACAGGAGGAGCTCCTTTTGAAGAAGGTGTGAATGATCAGGATTTACCAAACTGGAGCAATGAGAGTGTTGATGACCGACTCAACAACATGGATTGGGGCAGCCAGCAGAAGAAGGCAAATAGGTCATCAGAAAAGAATAAGAGAAAATTTGGTGTAGAAAGTGATAAAAGGGTAACTAATGATATTTCTCCGGAGTCATCGCCAGGAGTTGGAAGACGAAGAACAAAGACTTCACTGACGTTTCCACATAGTAGATACATGACTCAGATGTCTGTTCCTGAGCAGGCAGAACTAGAAAAACTCAAACAGCGGATAAACTTCAGTGATTTAGATCAGAGAAGCATTGGAAGTGATTCTCAAGGTAGAGCAACAGCTGCTAACAACAAACGTCAGCTTAGTGAGAACCGAAAGCCCTTCAACTTTTTGCCTATGCAGATTAATACTAACAAGAGCAAAGATGCCACTGTAAGTCCTCAAAAGAGAGAAATGATTGGATCAGCACAGTGTAAAGAGTTGTTTGCTTCTGCTTTAAGTAATGACCTTTTGCAAAACTGTCAAGTCTCTGAAGAAGATGGAAGAGGAGAACCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCTTGTTCAGATTCGTGAGTATATTACTAAAGCTAGTTCCATGCGGGAAGACCTTGTAGAGAAAAATGAAAGATCTGCTAATGTTGAGCGCCTCACTCATCTAATAGATCACCTTAAAGAACAAGAAAAGTCATATATGAAATTTCTCCAAAAGATTCTTGCTAGAGAAAATGAGGAGGAGGATGTTCGGACTATAGATTCAGCTGTGGGATCTGGTTCTGTAGCTGAGAGCACATCGCTAAACATAGATGTGCGGTCTGAGGCTTCAGATGCCACGGCCAGAGATCCTCAGCAGGAGCCTATAGAAGAGATAGAAAATTTGAAGAAACAACATGATTTATTAAAAAGGATGTTACAGCAGCAGGAGCAGCTGAGAGCTCTACAGGGACGACAAGCTGCTCTGCTTGCCCTGCAGCATAAAGCCGAGCAGGCTATAGCTGTGATGGATGATTCTGAAAAGGTTGCGGAGACAACTCCTGGCCATCATACTGTACCAGGCAGACAGCCGGCTCGTTCACCTTTGCATCAGAGAGTACCCATAAGAGAAACTACAGGTAGCCTATCTGGAGTCAGTATCACCTCTGAACTAAATGAAGAATTGAATGATTTAATTCAGCATTTTCATAATCAGCTTCGTGATTCTCAGCCTCCAGCTGTTCCAGACAATAGAAGACAAGCAGAAAGTCTTTCATTAACTAGGGAGATTTCTCAGAGCAGAAATCCATCAGTTTCAGAGCATTTACCTGATGAGAAAGTCCAACTTTTTAGCAAGATGAGAGTGTTACAAGAAAAGAAACAAAAAATGGACAAACTTCTTGGAGAACTTCATACACTTCGAGATCAGCATTTGAACAATTCATCATTTGTGCCTTCTTCAGCCTCTCCACAAAGGAGTGTGGATCAGAGAAGTACAACCACAGCTCCTTCTGCTCCTGTAGTCTTAACACCAGTGGTCAATGGAGAATCCAATAACCTCACGCCATCTGTTCCTTATCCTGCTGCTTCTCTAGTTTCTCAGAATCAGAATGAAAATGAAGGCCACCTAAATCCAACTGAAAAACTCCAGAAGTTAAATGAAGTTCGAAAGAGGTTGAATGAACTAAGAGAATTAGTTCATTATTATGAGCAAACATCAGATATGATGACAGATGCTGTGAATGAAAACACAAAAGAAGAAGAAACTGAAGAGTCGGAATATGATTCTGAGCATGAAAACTCTGAACCTGTTACTCATATTCGAAATCCACAAGTGGCTGCCACCTGGAACGAAGTAAATAGTAATTCTAATGCACAGTGTGTTTCTAACAATAGAGATGGGCGAGCAGTTAATTCTAACTGTGAAATTAACAACAGGTCTGCTGCCAACATAAGGGCTCTAAACATGCCTCCTCCTTCAGATTGTCGATACAATAGAGAAGGAGAACAGGAGATGCCTGTTGCACAAGGTCATGATGAGGAGGAGGAGGAGGAGGAAGCAGAAGATGAGGCCCTCAGTGGAGCTTCACTGTCTAGTCACAGCAGCAGCCTGATCATTGAGACTCCTGAAGATGCTGAATTTGAACATAAGATCCAGAAGCTTATGGCTGCAAAACTGAAACTTAGACACTTACAGAACCTTGTAGCCATGGTGCAGGACGATGATGCAGCCAATCAAGGAGTTACTTCTGTGGAGGATTTCTTCCCAGCAGAAGACACCAAACAAAATGCAAATAACACTAGAGGAAATGCCAATAAAACACAAAAAGATGCTAGAGTAAATGAAAAGGCAAGAGAGAAATTTTATGAGGCTAAACTACAGCAGCAACAGAGAGAACTCAAACAATTGCAGGAAGAAAGAAAGAAACTGATTGAGATTCAAGAGAAAATTCAAGAATTGCAAAAGGCATGTCCTAACCTACAGCTGTCAGCTGCTAGTGTGGGTAATTGTCCCACAAAAACACATATGCCAGCTGTTACTTCATCCCCAACCGTTAATGAGAATGAAGCCAGTACAAACAAATCTGGTTTTGAGCCTCATGATTCTTCAGTGGTAGATAATGAGGTATGGTCAGATATGCGAAGACATGAAATGTTAAGGGAGGAGCTACGACAGAGAAGAAAGCAGCTGGAAGCTCTGATGGCTGAACATCAGAGGAGGCAAGGTCTGGCTGAAACTGCATCTCCAGTGGCTGTTTCACTGAGAAGTGATGGATCTGAGAACCTGTGTACACCTCAGCAAAGCAGAACAGAAAAAACAATGGCAACTTGGGGAGGTTCTACCCAGTGTGCCCTAGATGAAGAAGGGGATGAAGATGGTTACCTTTCTGAAGGAATTATTCGGACAGACGAAGAGGAGGAAGAGGAGGAGCAAGATGCCAGTTCCAATGATAACTTTCATATGTATCCTCCAAACAGTGCAAATCGTAATTCTTACAATGTAAAGGAAACTAAAAATAGGTGGAAGAACAATCGCCCTTTTTCAGCAGATGGAAATTATCGTCCTTTAGCCAAGACAAGACAACAGAATATCAGCATGCAGCGTCAGGAAAACCTTCGCTGGGTGTCCGAACTCTCTTATGTAGAAGAGAAAGAACAATGGCAAGAACAAATTAATCAGCTAAAGAAACAACTTGATTTCAGTGTCAATATTTGTCAGACTTTAATGCAAGACCAGCAGACTCTGTCTTGTCTGCTACAAACTCTTCTCACAAGTCCTTATAGTGTTATGCCCAGCAGTGTTGCATCCCCGCAAGTGCACCTTATAATGCACCAGTTGAACCAGTGCTATACCCAGCTAACGTGGCAGCAGAATAATGTACAGAGGTTGAAACAAATGCTCAGTGAACTCATGCACCAACAAAATCAGCATCCAGAAAAACCTGCAAGCAAGGAAGGAGGCAGTGGTGCATCACACCCTCCTTCTCCCAGTTTATTTTGTCCTTTCAACTTTCCAACTCAGCCTGTAAATCTGTTTAACCTACCGGGATTTACTAATTTTTCGTCATTTGCACCAAGTATGAATTTCAGCCCTTTATTTCCTTCTAATTTTGGAGATTTTTCTCAAAATATTTCTACACCCACTGAACAGCAGCAACCGTTAGCCCAGAATCCTTCAGGGAAAACAGAATACATGGCTTTTCCAAAACCTTTTGAAAGTAGTTCTTCTATTGGAGCAGAAAAACAAAGGAATCAAAAACAGCCTGAAGAGGAGGTGGAGAACAGTAGGACACCATGGTTTTATGACCAAGAAGGTGAGGTAGAAAAGCCATTTCTCAAGACTGGATTTGCAGTGTCTGTAGAGAAAACAACAAATAGTAATCGCAAAAATCAACTAGATACCAGTAGGAGAAGACGCCAGTTTGATGAAGTGTCCTTAGAAAGCTTTAACAGTATGCTTGACCCAGTAGATCCAACAACAGTAACTAAAACATTCAAGTCAAGAAAAGCATCTGCACAGGCCAGCCTGGCATCTAAAGATAAAACTCCCAAATCAAAGAGTAAGAAGAGGCATTCTGCTCAGCCGAAAAGCAGAGTGAAAAATATTGGGTATGAAAGTGCCAGTGTGTCTAGCACATGTGAACCTTGCAAAAGTAGAAACAGACATTCAGCCCAGACCGAAGAGCCTGTTCAAGCAAAAGTACTCAGCAGAAAGAAACATGAGCAGCTGGAAAAAGTCATAAGATGTAGTAGGTCTACAGAAATATCTTCAGAAACCAGTAGTGATTTTTCCATGTTCGAAGCTTTGCGGGATACCATTTATTCTGAAGTAGCTACGTTGATTTCTCAAAATGAATCTCGTCCACATTTTCTTATTGAACTCTTCCATGAGCTTCAGCTACTTAATACAGACTATTTGAGACAGAGGGCCTTATATGCATTGCAGGACATAGTATCCAGGCATATTTCTGAGAACCATGAAAAAGAAGGAGAAAATATAAAGTCCGTGAATTCTGGTACTTGGATAGCATCCAACTCAGAACTTACTCCCAGTGAAAGCCTTGCTACTACTGATGATGAAACTTTTGAGAAGAACTTTGAGAGAGAAACACATAAAATAAGTGAGCAAAATGATGCTGATAATGCTAGTGTATCTTCAACTTGTGAGCCTTTTGCAACAGATGTTCTGGGTGACACTGTGATTCACTTAGATCAGGCATTAGCCAGAATGAGAGACTACACGCATATGAAGATGGAGGCTGAAAGTAGTCCAGACGTCAGGTGCACCTGCAGGATCGTTGAGGATGACGATGGTGCTGCTGCCACGACCACGATTAGTAATAATTTAGAAGAAACTCCTGTTATTGAAAATCATAGTTCCCAGCAACCCGTGAGTGAAGTTGCTACCGTCCCGTGTCCTAGAATTGATACTCAGCAACTGGACCGGCAAATTAAAGCAATTATGAAAGAAGTCATTCCTTTTTTGAAGGAGCACATGGATGAAGTATGTTCTTCTCAACTTCTAACCTCAGTAAGACGCATGGTTTTGGTCCTTACTCAGCAAAACAATGAGAGCAAAGAGTTTGTAAAGTTCTTTCATAAGCAGCTTGGAAGTATATTACAGGATTCACTGGCAAAATTTGCTGGCAGAAAACTGAAGGATTGTGGAGAAGATCTTCTTGTAGAGATATCTGAAGTGTTATTTAATGAATTGGCTTTCTTTAAGCTCATGCAAGATTTGGATAATAATAGTGTAACTGTTAAACAGAGATGCAAAAGGAAAATAGAAGCTGCTGGAGTGATACAGTCTTATGCAAAAGAGGCCAAAAGGATTCTTGAAGGAGATCACAGTTCACCTGCTGGAGAAATTGATGATGAAGACAAAGACAAGGATGAGACGGAAACAGTTAAGCAGACTCAAACGTCTGAGGTTTATGATGGTGACGGCCCCAAAAATGTGAGATCTGATATTTCTGATCAAGAGGATGATGAAGAAAGTGAAGAATGTCCAGTGTCTATTAGTTTGTCCAAAGCTGAAACTCAGGCTTTGACTAATTACGGAAGTGGAGAAGATGAGAATGAAGATGAAGAGATAGAAGAATTTGAAGAGGGACCTGTAGATGTCCAGACGTCACTTCAGGCTAACACTGAAACTACAGAAGAAAATGAACACGATGATCAGGTTCCACAGCATGATTTTGAAAAATCATCAGAAAGCAAAAATGTCCCATCAGAACAAGAACCCACTACTAGTAAAGGTGACCAGGATAGCACTCCTGTGAAGCCATGTTACCTCAATATCGTGGAAAATGAGCAACCTTTAAATAGCCCTGTCCAGAAGGACACTCTCACTACCATCGACTCGTCCAGTCAACCTAACCCTTTGCCTTTACCTTTAACTGAAATTGAAACCTTGGTGCCTAGAGTCAAAGAAGTGAAATCTGCTCAGGAGACTCCTGAAAGTTCTTTGGCTGGAAGTCCTGATACTGAATCTCCAGTGTTAGTGAATGACTATGAAGCAGAATCTGGTAACATAAGTCAAAAATCTGATGAAGAAGACTTTGTGAAAGTTGAAGATTTACCACTTAAACTGACAATATATTCAGAGGCAGATCTAAGGAAGAAAATGGCCGAAGAAGAACAGAAAAACCACTTATCTGGTGAAATATGTGCAATGCAGACTGAAGAATTAGCTGGGAATTCTCAGACACTAAAAGAACCTGAAACAGTGGGAGCCCAAAGTACATGAGATGTCTCCAGAGGCTCATCTAACTCTTTCTTGACATGATCAATACGTATATGAAAATGGCACTAAATAAACATCTGTTTTAATCTGTATAAAATGTAAATCAGTTTGACACTGCATTTTTGGTAGGTGTGCTAATCTCTGCCCATGGCAGTTTAAAACATCAAAAACTGAATTCTGGACAGATTCAAGCCTTGATACACTGTGGGGTTTTTTTCTTTTTCTTTCATTTTTTTGGTCCTGATTTTTTTCCCCATTGTGATGTTTAGTAACATAGAATTTAAAATGTAGTTTTAAATAAAGTTTGGACTTATCTGTAAACTATCTTTTTTGAAAATTATGTTGAATTCTATACAGCAAGTCACTGTTCTATATAATTAGGCTGTTCAGAGAAGAGCAATGGTCAAGAGTTAAAGAAATATACTATTTATTATAAAGCCCAGCCTTCAGGCCAGGCTTCCAAATAATGCCAGTGTTGCTGCTATTGAGTCTGATATTCTTTTAGATACCTGCAAGTCTTATTCCTTTGCAAGAATAGGGCAGGTTATAAAGGTATCCAGGATTTCTGAGAAGTTATTATAGAATATAAATATTCTATTCAAATTGGATAATAAGTTTAGAATACTTGTCCTTAGTACCTAGAATTTACATAATTATCTATTAGATAAATATTTTCTAGGATTTCAATTCATATCTGTGTTGCCTCAGTTTAAACGTTAAAAGAGAGAACATTTTCTATAATTAGAGAATATTTCCGCTTAAACAAGGAAAGTAACATTGCGATTACTTTAAAAAGGAAAACCAAGCTCTTTAAAGTAAGGATTAATAGAACTAAATTTACGTACCAGAGCACTAAGGTTCTATTTGCTTTTGGACAACCTTGCTTTTTGAGACGATAATTTAGGCCAAAACGTAGCAGTTGTCTCTGTGTGTAGTGAGAGAGAAGCAGGTGTGCAGATGAAGTACTGTATGGAGTAATGAGAATTACGTGACCTCTTTATCACTAAGCAAATCAGCTTTTCAAAGGTGGTGTACTTGTAGATCCCATCTTGCCGTATATCGAGTTAAAGGCTTCACGAAGCCAGTTAACAAGTCAACTTTACAGACTGTTCCTTGAATAAAATACGAAGAATTAGTCCAAATTAGTCTTTTAAATTTGTCAACAGTTTACTGAAATACCCCATAAAAAAAGAATTTGGTTGGTATTCCTTCGAAATTCTTGCCTGATACTTCAGTGTAAAACTATAATGTCCAGTCAGGGAATATTAAATGAGGATTTCCTTCTGAGGACATTGACTATATTGTTCTGTAATTTAAATTAGGTGAAACATATATCTCCAACTTTATTAAACTTACTCAGAACACTATCATTCCAGAAGCAGGAATTATTCAATTGGCTTGACTTCAGGGAAATTGAAGCATAGTAGTATACATATATATTATATGTATACTTAAGTTCTAGATTTGTTTTCTAGACTCTACAGAAACTTCATTTTGATACACTCAAGCCAAGCCTTACACATTAAATATTAAGACTGTCTCTCTCTCTGCATACAAATTAAAGATGGGATACAGTGGAATCGTTGTACTTAGATCTTAAGTTATTGTAGTATCTGTGAACCTTATCAAATTTGTTTATTTGACTTAACAGCTGTTGTAATCTGGTCTTTTGTTTTCTATTATAGTAGATGATTTAGTTTTAAGTGCTTGAGAGCAGATAACTTGCTTAATATGTTTTTTTCCTGGTAACTGTTGCTAAAGGGTTAGGCATTCAATATGTACTGTTGTCTTAATTTTTAAGTTAAAAATTTGGTTAAAGGTAAAAGAGGAAGAAAGGTCAAAATAAGTGAGAGAGAAACCTAGGCAGGTTGAAATAATGCCTACAAGATTGAGCTCACCAGACTGTGCAGCAGGTACTCTTTGTATTTTTAACATTCACTTTGGGTAAATGCTTTTTCACTGTTAATAAATGTGTATCCTGCATACAACCCTGAATTGCATTTTCATTTAAATTGACAAACTCATTTATGCTTTAGAATTTATTCCAGATTTTTGGCTTATTTGACAATTTTAAGTGTGTTTAAAAAAAAAAAAAACTCAATACAAACTATTATATATAAAATAGAAAACAATAGGGTTCTACTGTATAGCACAGGAAAGTATTCAGTATCCCCTAATAAACTCTAATGGGAAAGAATGTGAAAAA EMBV3_12837 TTTTGAAGATCTCCACAGACTAGAATGGCTAGTACTGATGAATAATGTCCTTACCCGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13504 CCCGCGAGCTGGCCGCGCTCTACTCCCCAGTGGCAGGGGCTCTCCTTGCTGACTTCCTGT Variant GeneID:507694|TMEM189:NM_001100315:928_cdna 50^169 2 EMBV3_29187 GeneID:507694 13 GENE TMEM189 NULL transmembrane protein 189 EMBV3_34275 AGCATGCTACCCATTTTCTCAAGTTATTTGCTGCCAGTAAGTAAACCCATTTTCCACCTG Gene GeneID:281115|DHX9:NM_174036:5_cdna Constitutive 0 NULL GeneID:281115 16 GENE DHX9 DDX9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 EMBV3_16761 TGACATTTTCACCCTGACATGTTTAGCCATTTGTCCTCGTGGGAAGCCCCCTTGCACTGC Gene GeneID:505662|SIRT7:NM_001075217:48_cdna Constitutive 1 NULL GeneID:505662 19 GENE SIRT7 MGC142712 sirtuin (silent mating type information regulation 2 homolog) 7 (S. cerevisiae) EMBV3_08918 CCAAAAGGAGGAATTCCAAGATGTTTTTAGTAACCATTGCTTGTGATGCAGTTCTCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43092 TAGTGCTAAGAGAAGCCGCGGCCAGCGTAGTGAACTTCGGGGCCACCTTGTTAGAGATCT Gene GeneID:100137824|LOC100137824:NM_001145539:2_cdna Constitutive 0 NULL GeneID:100137824 19 GENE LOC100137824 NULL hypothetical protein LOC100137824 EMBV3_32335 CCAGGAGTTGCTGGGAAAGGAAGGATTTGATACCCTGGATCCCTTTATTCCCATCCTGGT Gene GeneID:504320|DAP3:NM_001113294:64_cdna Constitutive 0 NULL GeneID:504320 3 GENE DAP3 MRPS29 death associated protein 3 EMBV3_07208 TGCTCCTTTGGCAAGCAGGTGGTGGAGAAAGTGGAGACCGAGTATGCACGCTACGAGAAT Gene GeneID:526771|TEAD4:XM_002687882:60_cdna Constitutive 1 NULL GeneID:526771 5 GENE TEAD4 NULL TEA domain family member 4 EMBV3_11636 GGTGCTACTGGTGTGTAAGCTGTACTGTTGCGCGAGAAGAGACCAGTCTGTATGCTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32530 AGGAGCTGAACAAGCTGTTGGGCAAGGTCACCATCGCCCAGGGCGGCGTTTTGCCCAATA Gene GeneID:788724|LOC788724:XM_002686087:28_cdna Constitutive 0 NULL GeneID:788724 3 GENE LOC788724 NULL similar to histone cluster 2, H2aa4 EMBV3_08226 GTTCTTTGGACTGCTTGACGGTTAAAATCGATACCACATCCCAGTGAAGATCCCTCTGCC Gene GeneID:526950|UBL3:NM_001038144:130_cdna UTR3_Alt 1 NULL GeneID:526950 12 GENE UBL3 MGC128515 ubiquitin-like 3 EMBV3_32580 GCTTCAGAGGAGATGAGTTCCTTTGCATGGACCATTGTGGTGTATGTTGGAACCTCAGGG Gene GeneID:520994|PTCH1:XM_002689829:20_cdna Constitutive 2 NULL GeneID:520994 8 GENE PTCH1 NULL patched homolog 1 (Drosophila) EMBV3_41875 CTGGAGATGGGAGAGTTCTTTCAGATTCAGGATCGGCACAGACATCCAGGACAACAAGTG Variant GeneID:281156|FDPS:NM_177497:22_cdna 730^773 3 EMBV3_03521 GeneID:281156 3 GENE FDPS MGC134236 farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) EMBV3_25574 ACTCAGCAGTGACCACAGGACCAGAAAAGATCAGTTTTCATTCCAATGTCAGAGAAAGGC Gene BVV0101_010244 + 0 NULL GK000018.2:61341284-61362407 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00254003 1 XLOC_156941 NonCoding TCONS_00254003 XLOC_156941 NonCoding NonCoding - X:124521967-124522464 - TSS191224 497 1 TCONS_00254003_1 43 0.989939637826962 1 0 0 0 0 0 3.31132061632818e-06 0 0 0 0 0 0 0 0 0 8.97422276412299e-07 0.00053142025639961 0 0 0 0 4.07207202737863e-06 0 0 0 0 0 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 637 88.55 0.993963782696177 0 noncoding CAGACATCCCGGAATGTGAAGTCAAGTGGGCTGTAGGAAACATCACTAAGAACAAAGCTAGTGGAGGTGATGGAATTTCAGTTGAGCTATTTCAAATCCTAAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGGCAGCAAGTTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGATCAGTTTTCATTCCAATCTCAAAGAAAGGCAATGCCAAAAAATATTCCAACTACTGCACAATTGCACTCATCTCACACACTAGCAAAGTAATACTCAAAATTCTCCAAGAGAGGCTTCAACCGTATGTTAACCGTGAACTTCCAGACGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCATTTGATCATCAAAAAAGCAAGACAGTTCCAGAAAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGACTGTGCAGATCACAACAAACTGTGGAAAATTCTTC TCONS_00248199 . 5' 184356 TCONS_00248199 . 5' 184356 EMBV3_17679 TTAACTAGAAAAGGAAACAGGCAAAACTGGCAGGCTCGGTGAAAGCACAGCCGGCAGCGT Gene BVT0102_096863 - 1 EMBV3_06524 GK000003.2:19756234-19762894 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29914 CAGAGCGCACCCAGCAGATAAGAAATCTCAAGACCACTAGGGAGGAGGTGCTGTTGGCAT Gene BVT0101_032600 + 0 NULL GK000013.2:54499224-54502119 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045570 TCONS_00043070 2 XLOC_026467 XLOC_025839 Coding TCONS_00045570 XLOC_026467 Coding Coding SLC2A4RG 13:54499395-54505387 = TSS33223 4258 1 TCONS_00045570_1 391 8 0.29060257052245 0.000124625672553446 1.28379654003499e-09 0.000119427044308301 0.000553868928321594 0.000103195973759688 8.40907155535031e-06 8.21745736132423e-05 3.61157910461614e-05 3.88264298365931e-08 3.33947458171927e-12 0 0 2.73092274977578e-12 3.86569414296104e-06 8.10793669199794e-12 0.00130712237955433 6.4501980267282e-06 0.000185472423353804 7.40917717434641e-05 3.35498854983289e-05 0 0.000177760873006771 8.46291589737826e-05 0.000108329576871116 3.4710094815007e-05 4.13659543304693e-05 3.16168369941412e-05 3.47736254210533e-06 3.50427186081624e-06 0 XM_005214614.1 ZBTB46 PREDICTED: Bos taurus zinc finger and BTB domain containing 46 (ZBTB46), transcript variant X1, mRNA. 0.0 4569 100.00 0.594645373414749 NM_020062.3 SLC2A4RG Homo sapiens SLC2A4 regulator (SLC2A4RG), mRNA. 0.0 879 78.83 0.224753405354627 TCONS_00045570_1 sp|Q9NR83|S2A4R_HUMAN S2A4R_HUMAN SLC2A4 regulator; 1e-129 382 69.45 0.826086956521739 0 coding 0 0 0 0 -0.00847945236755987 0.947331666356856 0.0642957412238379 0.202643519810383 ATGGCGTCGGGCTGCACGAACTTTGGGCCCCGGGGCGGGGCGGGCGGGGGCGGCGCGTCGCCGCGCGTGTCCGTGGGTCCGGCGGGGCTGGGCTGGCGCCCTGAGTGCTTCCCGCCGCGACGGCCGGGGGCGGGGCCGGGGCGGGGCCACACCGGCCGCAGCCGGTTTGGGGGCGGGCACCACGCGCTGAGCCGGCCGCGTCCACAGGGCCCTGCTGTTGAGTTCGCGCTGCCCCAGGAGCCGGAGCCGCGAGCCGCGGACCTCGGAGCCCCAGGGGCGGGGGCGGCCGGGCCCCCGACACCGTCAGCGCACATCCCAGTGCCAGCGCATAGAACCCCCCCAGGAAAAGCCCGACTGGACGAGGTCATGGCTGCCACAGCCCTCACAAGCCTGTCCACCAGCCCCCTCCTGCTGGGGGCCCCAGGTGTGACCTTCAGCACAGAACCGTGCCTGGAGCCCTGGAGGGAGGCCCCAGTGCAGCCACCGGGCAGCGGCGGGGGCTGGGACCCTGCCAGTGACCAGTCCTCTCCGTCTACACCTTCACCACCGCTGCCCCCTGAGGCAGCCCACTTCCTGTTCGGGGAGTCCGCGCTGAGGAAGAGGAAGAGCTCGCTGCAGGGGCTGTTCCAGTGCCTGTGGAAGCGCTGCGGGAAGGTGCTGAGCTCCGCGTCGGGGATGCAGAGACACATCCGCCTGGTGCACCTGGGGAGGCAGGCTGAACTGGAGCAGAGCGATGGCGAGGAGGACTTCTACTACACAGAGCTGGATAGCGGCATGGACTCGCTGACCGATGGGCTGTCCGGCCTGACCCCAGGGTCCCCCACGGCCTCGGTGCCACCTGCCTTTCCCCACCTGGAGCCGCTGGAGCCTCTGGCCCTGCCCAGCCTTCTGCGCCTGCCTGCCATGCCCCCACCCCCGGTGCTGAGCACCACATCCCCCTCCCAGGTGTGCCCCAGTGACCATGCCCACCAGGGCTGCCTGGCACCCGTCCGCCTGGAGCCACAGCCTACCCCTGTCAGGGCCTGTGTGCCAGCCCTGCCAGCCAAACCCAGTGCCAACCCAAGGAAGCCCCGGGGTGATGCCAAGAAGTGCCGGAAAGTGTACGGCATGGACCACCGGGACCTGTGGTGCACGGCCTGCCGCTGGAAGAAGGCCTGCCAGCGTTTCCTGGACTGAGCCTGCCCAGGGCCTCTCCGAGCTGCAGGGTCTTCTTTTTAAGAGGGGAGGTCCCCACCACTCAGAAGTGCCTCTGAAGAAACCAGCCTTTGGCCTTTTGCACTAAAGCCAAACCTCACCGCTGTCCCCTCGGCCCAGGGTGGCCGCCCCCGAGTCGGCCCTGGACTTGTCAGGAGTGTGACGGGGCCATGCAGGGCGTCCTCGATGCACTTTGAGGGGTGTCAGGGAGGGGCGCCCCTGCCCGCACTTCACCTGACTGAGGGCCCAGGCGCATGTCTGTGCCGTGTTTGCTCAGGTGTCTCACGTCTGGGCTGAACCAGGCGAAGAGTAAAATTAAAGATTCGGGACTTTTCCAAAAGCTGTGTCTGTCTCCTGGGTGGGAAGGGACATGGAACTGGGACCCTGCCATAGGCAGGGGTAGCAGATGGGCAGAGAGGAGGCCAGTAGCCAGGCCACAAAGGGCTGTGGGGTGGGGCGCCCTCTGGCCACCTCTACCCAGGGCAAGGCCGGAGGAGGGGACGCTGTCTGTAACACACACGAGGCGATGGCTCAAGCAGCAATTTCCCGATTTATTGAAAGTGATCGCTTTGCAAGAATATCTAACTAATCCCGTCACAGAGACGAGACCCACAGGGGTCCCAGAGCGCACCCAGCAGATAAGAAATCTCAAGACCACTAGGGAGGAGGTGCTGTTGGCATCGATGGCTCCAGGGAAACAGGCAACAGCCCTGATGTTCCACCGACCGATTACAAAAGACCCTCCACAAATGTGAAACACATTTCCAATACAAACACAGGTTTATAGTCATTAATATAAAGTCGATATAATATAGATTATCCCCAGAAAAAAAATCAACAATCTTCAAACACTGCCCTTTTTTTGTCTGTTTTGTTTTTGTTGACAGGTTGAAAGCATGTTGAAAAAATAAATATTTAAGAAAAGCACACACACAGCGCCCTCACTACAAGGAGTTCTAAAAAGGGCCGGGTACAAAACACAATATAGGATCTAAAAATAAAAACACCATTAAGTATGGCTTTCTTAAGAGTTGCACATGTCACAGAATGAGCGAAAATAAGATTATCTTTCATATAATATTGCAAAAAGTTCCAGTTTTTGCATTTTCTCAAGAGTTCTTTTTTCTAAAAAGGAAGATGTGCAAAGTTGGAAGCAGTAGCTGTGTCCTTTCAATCGAGGTCCCTATCCAGTCCTGGCAGTGTTGTGACTATTCCCAAACCCAGAGTCCAAACATACAACCCCGTCAGGATCCAGAGCTTGATGCAAAATCTTGGTTCTCCGCCCCTCCCCTACCCCAAAGAACGAGCCGCCTGATGGCCCACCTTCCGCGTTGGTGATGCAGACGCCGAACACAGACGCATACACGGGAAGGTACAAAAATGTGAGATGTGATCTACACGCTTTCCGCTTCATAAAAAAATATTTATTAGTTTAAACATTGCTTTGGAAAAAAAAAAAAGACCACGATTAAAAAAAAAAAAAATCTTCATTACATGTCTTTCCCTTCATGTTTGCCTCCATCTCTGAAATCCAGCTTACACGAGAATTAACACGGGCTCAGGGGCGGGAGGTGAATTTCCCAGTGAAGTATCGTTTTGAGGGAGAAAACACCCCTGTGGCACCGAGGGCCCCGGAGGGGTCAGCCAGGGTGGTCCAGAGTGGGAGTGGGCAGGCCCTGAGAGTGGCGCAGAGGTGGCCCTGTACAAAACCCAGAGATGCTTGGTAGCAAAGGTCTGGTTTCCAAATGCATCTGATAGAAAGTAAGTCTTGTTTATAAAAGGGTTTAGAAAGTGGGGGAAAGGTCCACAATGGGGAGCCCCGCTGAGTGGCTCAGACAGGCCCCACTATGAAAGGCAGAAGGGGGCGCGGGCTCCAGAGCCCCCTCACCCTGGGCTCCTGCCCCCGCCGGCCGGCCCTTCCCTCAAGGATGCCGACAGCTGAGGATGGGAGCAGTCCTCTTCTGAGAAAAACATGGCTGATGGTGTTTAAAACAAAACAAAACATGAAGCTGTGACTTCTCCCCTGGGCAGGGATTCAAGGACAGCACCATCCAGGTGCCTGCAGCCAGCCCTGACTGCCCCCCGCCACCCCTACAGCAGCCACCTGGGAGGGGTTGGTGGAATTTGCCTTTCTCCATCGAGAAAGAGGAGCGGGAACCCGGCAGGAACACAGGGAAGCCATGCAGTGCAGGCTAAGGGAAGAGAGAAAACCCAGTCCAGCTCTCCTCCAGCCCCAGCTCAGCACCTCAGGGCCCTGACTTGGGGTCCCTCGGGGGCTCCTGAGAGAGGTGGGTGCAGAGGACGGAATGCATGTGTCACGAGCCTTAAGGAAGACAGGCTGGTGCTGGACTGGCAGCCTGATGGGGACGGGCAGCGGGCAGCGTCCTCACGGCACGAGGTGGGACCCCAGCCCCTTAGAAAAGAGAGAGGAGGGTGGATGAGTTCGTTTACAAGACGGCGAGGCTCGGGAAGAAGCCAAAGGAAAGACAACTCTGAAGATAATGCCAAACAAAACCATTTCACGTGCCGGCCTCAGTTCCCTTAGCGACTCACGGAACTGGGGCCCAGAGCACCTGGGGAGTGGGGTGGCCCCCGCGGGCGGCATGAGCAGCACGGGCGTCAGGGACACCCTCCGGCGTTAGCAGCAAGGAAGGCAAGCCGCCCGGGAGGGTCAGCAGGAGTGGCCTAGGCGCAGCAGGACGGCGGGGCTGAGGGGCAGGCCGGCCCGGCCCTCAGAGAAGTGCACACGGAGAAAGAGGAGGCGCCTGCAGTGGGAGCACCTGGGCCTGTCCGCCCGGCTGCCTCCGTGGGGAGATAGCACCTGGGCGCCCTGGCCGAGGTCGGCAGCTGCTGTATGTTGAGCACCAAAGCCCAGAAGGGGGAGGGCCGCAGGCCTTTGTGGACGCCCGACCTGGATCCCACAGGCTGCCACCGCAGGCACAGCCCTCGAGCCGCCAGCAGTCCCTCTGCAGCTGACAAGGGGTTGGGGGGACTCAGCCCTGGATGGCCGGGGTCAGTGGAACTCTCCTAACAGCCCCGGGACCCAGGCCTCAGGGACACAAAG EMBV3_32497 CCAGGATCATTAAATCCACCCTAACAATTTCTTTGATGATGGAAAGGATATTCTGTTGAC Gene BVT0102_403078 - 1 EMBV3_35132 GK000023.2:4906606-4937119 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133792 1 XLOC_081210 Coding TCONS_00133792 XLOC_081210 Coding Coding GFRAL 23:4922687-5011035 j TSS99853 2457 1 TCONS_00133792_1 403 0.212454212454212 10 0.972302398496836 0 5.72559474630244e-05 4.89626806049821e-05 0 2.21411681889588e-06 0 4.24429929224712e-06 5.03722972657171e-15 3.21128371619947e-06 0 9.31698208344837e-07 1.45530696822207e-06 0 0 2.79932799214573e-14 4.75243420488604e-05 0 0 0 2.92692679270959e-06 1.8523930206924e-05 0 0 0 0 1.77050058966022e-15 2.98641176407098e-15 0 0 0 XM_610461.5 GFRAL PREDICTED: Bos taurus GDNF family receptor alpha like (GFRAL), 0.0 2022 100.00 0.455840455840456 NM_207410.2 GFRAL Homo sapiens GDNF family receptor alpha like (GFRAL), mRNA. 0.0 1218 82.22 0.497354497354497 TCONS_00133792_1 sp|Q6UXV0|GFRAL_HUMAN GFRAL_HUMAN GDNF family receptor alpha-like; 0.0 603 76.52 0.935483870967742 1 coding 0 0 0 0 -0.00591529390889747 0.96962635284592 0.0125385947779343 0.816035622788107 ATGATAGTCTTCGTTTTCTTCGCTGTGGGTCTATGCTTGAACAAGTCCGCTTCCCAAACCACAGATTGCACATATTTAAGAGAGCTCTGCCTAAGTGATGCCGACGGTTGTAAACATGCCTGGAGAATAATGGAAGATGCCTGCAATGTGTCAGATCCAGGCAACACCTGCCAGATGAAGAATTCATCCAGCTGTGGCCTAAGTATCCAGTCCTTAGTGGAAAGCAATTTACAATTTAAAGATTGTCTCTGCTTTGATGACCTTTACTGCACTTTTAACAAATTGCTTGGGAAAAAATGCATCAACGAATCAGATAACATAAAAGAGGATAATAAATACAAGTGGAATCTAACTACTCTTTCCTATCACGGAGGCAGAGGGGTTCAGTCCTGCCTGGAAGTGGCAGAGGTTTGCATTGGGGATGCACTCTGCAATGCCCAGCTGGCCCTTTACCTGAAAGCTTGCTCAGCGGATGGAAAGCTGTGTGATGTGAAACACTGCCAAGCAGCCATCCGCTTCTTCTATCAAAATATGCCGTTTAACATTGCCCAGATGTTGGCTTTCTGTGACTGTGCTCCCGCTGATGAGCCTTGTCAACAGTCCAGAGAAGCACTCCACAGCAGGCCATGTGCAGTGAACAGAGTTCCAACCCCCACCTGCCTCGATGTAATTCACAGCTGCCAAGATGATGAATTATGCAGGAGGCGCTATAGAATATTCCAGGCCAAGTGCTGGCAGCATGTGATGAGAAAGTGCCATGAGGATGAGACATGCATTGGTACCTTAAGCAAGCAAGACCTCGCTTGCTCTGGAAGTGACGACTGCAAAGCGGCTTACATTGGTACCCTTGGGACCGTCCTTCAAGGGCAGTGCACCTGTAGGACCATTACCCAAAGTGAAGAATCCTTGTGCAAGACTTTCCAGCATATGCTCCACAGAAAATCATGTTTCAACTATCCGACCCTGTCTAAGGTGAAAGGCATTGCATTGCAAAAAGGAAAACATGCAAAGGAGATAACTCTCAGTGGATTTCATCCCTCCTTCAATGGCGAAGTCATCTATGGTGTCGTGTGCGTGACGGCCACCTGCGGGATCCTTCTCCTGCTGATGGTCAAACTGAGACCCTTCAGAATATTGAATCAAAACAAGAGATCCTTCATGAACCCAAATACCTGGCACACTCATGATTCATTAAGAGTCGCGGATGATTAACAATCACTTTTGTTAAAGCAAGTCAACAGAATATCCTTTCCATCATCAAAGAAATTGTTAGGGTGGATTTAATGATCCTGGATCATCAAATATGTTCATATATACAATTCAACTAAAACCAGAATTATTAGAGAGGAAACCAGGACAAGGGAAATGGGAGGAAAAGAAATGAGGTGATGAGAAGAAATGAGAAGAGAAAAGAAAAAAAAAAAGCAACAACAAATGCCAGCGGATTTGACAGACTGGCCTTGTTTCCCTCTCATCCCAGTTTTCTGAATTATCTCCCCTTTTGCAGGCAGAAGACCAAAGAGTGCATGGTAAGCAGAGAGAACCCTGGATATAAAACTACTCGAGAGACAGTGTTTGCAGACCGATTCAGATTAGGGCTTTGGAGGTTGTAGCTGCTTCACTATAATTTTATAGGTCATTATAGTTATCTTCGTCAGAAGTCCATCAGAGAAGACCCCAGCAGTTTCCCCATACTGGATTTAATTTGTTGATCAAATGTAATCCTTTTTGTTAAAATCCATGAAGCATATTTGAGATTTCTGACTAGAAATGACTAGAAATCAATTGATTCCACTGAGGAACTGATGTATGTTTATATAACGGACACTGAAACCAGTATCTAAATATATTTGTCTTTTTGATACAGCTGCTAGAAAGTCAGAGTTTCCTTTGCACCTAACAATTAGAAAGTTTCCCTCTGTACAGACTCCTATTATATTTTTATTTTCTAGTGTACATTTGAATTTGCCTCGTTATCTATCTTATTTGTAATCCTACTCCATGTAATAAGTGTCACAAACAGGATAGGCTGGGTTATCCTATAGCAACAAGTAATCAGGATATGTCAGTGGATTATAATGACAAAGGTTTATTTCTTGCTCACACTAAAAGCTCATTACTATGAGCTGTCAAGAAGCTCTGAATTTGTTCTGTTGACTTCACAGAGAGATTTAGGCTGACACAGCCACTTTTCTCTGAACTATTACCAGAGGTGAATTAGAGATTATGACAAAGTACATGTTGGATCTTAAACCTCCATCTAGGATGTGCGTGCACGCATGCTCAGTTATGTCCAACTCTCATGCGACCCTTATGGACTGTAGCTGGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCTAGAGTTCTGGAGTAGGTTGCCATGCCCTCCTCCAGGGGATCTTCCTGACCCAGACATTGAACCTGGGTCTCTTGCATTGCAAGCAGGTTCTTTACC EMBV3_40044 TATATTGAGGACCCCAGTTTGAGGCTAGCAGCTGGGATGTCATTGGAAAAGCCTGAGCTT Gene GeneID:538466|TECTB:NM_001083733:69_cdna UTR3_Alt 2 NULL GeneID:538466 26 GENE TECTB MGC139051 tectorin beta EMBV3_34211 CTCCTGATCCCATTCTGTACCCATTCCTTTGCTTCTCCCATCCTGAAACTGCCACCTGGA Gene BVV0102_178322 + 0 NULL GK000024.2:48271528-48769620 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01026 ACTTGAAACACACTGTTTGTGGACAAAGCCAAGGTCCTCACCTCCAACACATGTAAAAGG Gene GeneID:780850|VTI1A:NM_001079792:84_cdna Constitutive 1 NULL GeneID:780850 26 GENE VTI1A MGC152091 vesicle transport through interaction with t-SNAREs homolog 1A (yeast) EMBV3_04483 TGTCTTCGTCAAGAACAAGTACGGGTCTGAGACAGGCCAGGTCACCATCAGCGTGTTCAA Gene GeneID:532872|MYOM3:XM_002685774:591_cdna Constitutive 0 NULL GeneID:532872 2 GENE MYOM3 NULL myomesin family, member 3 EMBV3_20868 TCTGGGAAAGAAGGTGCGCGTTAAGTGCAAATGAAATCCACGATGGGATGAACCTGGAGC Variant GeneID:614551|UBL5:NM_001037710:8_cdna 249^370 3 EMBV3_11520 GeneID:614551 7 GENE UBL5 MGC127118 ubiquitin-like 5 EMBV3_34585 TGTGCAGCCCAGGACCTGGTGTCCGTTTGGAAGACCTGGGACTGGGTTAAGGGTCGTGAT Gene BVT0102_205258 + 1 EMBV3_29107 GK000017.2:71572740-71575828 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076237 TCONS_00076234 TCONS_00078159 TCONS_00076235 TCONS_00076236 TCONS_00076238 2 XLOC_046759 XLOC_047236 Coding TCONS_00078159 XLOC_047236 NonCoding NonCoding SEC14L2 17:71562226-71574217 x TSS58227 1578 2 TCONS_00078159_2 49 3 0.868640533778148 0.00277519255404532 0.000433502630581778 0.000607817275621495 4.04139322404576e-05 4.89575259710792e-05 5.60155480122032e-06 7.27309652053491e-11 5.49120496075569e-39 0.000145058967164819 0 0 6.7894321220384e-06 2.43114958428052e-57 2.90331980873066e-226 1.41652147144733e-05 6.86287874996555e-05 0 0 0.000154988669294697 6.81885489281546e-05 1.39441869280921e-05 0 0 5.31197839407396e-05 0.00105664436071141 0.000646566847179344 0.000188543857167956 1.21738731990899e-05 0 0 XR_228348.1 LOC101904849 PREDICTED: Bos taurus uncharacterized LOC101904849 (LOC101904849), 0.0 1667 100.00 0.584917617237009 XM_005261425.1 SEC14L2 PREDICTED: Homo sapiens SEC14-like 2 (S. cerevisiae) (SEC14L2), 4e-33 147 68.08 0.305449936628644 0 noncoding 0 0 0 0 0.0724949508644183 0.647062009434392 -0.010120694766725 0.832988386819359 CGGAAGACAGCCCACCGGCCGGACCAATCTGGGGACGAGCTGGCCGTGGGGGGCGCGCACACGAGTGTAGCAGGTGGCTCTGCGCGTGCGCCCCGCTTATTGGCGGGTAGACGCTAGAGTCCTGAGGCGGAAGTTTGCCTGAGTGAGGAAGTGTGAGGAGCGAGACAGAGGGCGCAGACTTACGCGCTCTGCGCGCCGAACGTCCTTTATTCATTGGCTACTTTTCCTAACAGAGCGTTGTAAACAAAGGTCGGGATGTCCTCCTGAGGGGTCTGGCTGGGGCCTGTGCGGCCTCGGGCCTCCTGTCGGCGCCAGCCTCCCCGCTACTCCCGCTCCCTCAGCTAGGCCAGACCATCTCCCCAGGCTGGGCCAGGGCCTGGGTTTCTGAGCGGAAGGAATGCCCCAGGCAGCGAGGGCCGGGCCCCGGCGCTGTGCAGCCCAGGACCTGGTGTCCGTTTGGAAGACCTGGGACTGGGTTAAGGGTCGTGATCGCCCGCAGGGCCTGTGACCTGCAGCCCCTGGTCGCCGAGCCGCCACTCCTAACCGCCCGCTACCCACCGTGGGCATCCCTGCCTGTCGCCGTGGGCGGAGGGGGTGGGGGCCCGCGAGGCTATCTGTGGCTGCCCTGAGCCCCTGCCGTGGAAGCCTCCCCAGCAGGCACCAAGAACCCGCGGCACCCACCATGTGCCTCCCAGAGACGGGACTGCTAAGGCCTCGCTCAGATTCCTAAACGAGTGTCAGCCAGAGGACAGTGTCTTGATCCTGGGAACCTCTCCGTGCTGACTACAGACACCAGACACAGGCAGCAGCTCCGAGTCACAGGGTACCTGCAGCATCCTGTGTGGCCGGTGCGGCCTGGAAACTCACGAGCACAGTCCGGGGGCTCCCAGCCGCAGGGATCTAAAGACCTGCGACTAAGCGACTCCAGGGCCCTGTGCCCGGCCTCGGGGTGCCCGGTCTCGGGGTGCTTCCATCTGTGCTAAGCTGCAGCCCGGGGCGAATTTCTGCCTCCTCTCTCTTGAAGATCTGTGCCTTCCCAGCCCAAGGCGGGTTCGGCTGAAAGGGTTTCAGGTGTGGGTGGTAACATACTGAACCTCCTCCACAGCCGCTGCCAGGAACCAGAGCTGGGCTCACGCACGTGGTGGGCGGCAGCCACAGAAGAGCCAAAACTCATCAAGAGCCTTTCGCTCAGACTTTTTCTTCCCCCAGCTCAGCTGGAGGGTTGGAATCCGGCCAGGAGCATTCTTCCCATCTTACAGACAGGAACTGAGGCAATAAGGACAGCACTCGTTGCGCCAGAGCCAGCACCAACAGCCAGAGGTCCTGTGCCCTCCAGACTGCTCCGCGCCACACCCAGGCCTCAGCACGTGTTTGCAAAACCTCTGCGTTCAATGTGGTGCCTGAAGAGTGTTACAGGAAGAGTTCTCACGAAAACAAAGAGGAAGAAGCCCCTTGCTGGGGCCCAGCCTGCTTCCGGGGTGCCACTGCGCCCCAACCAGAAGAGGGAGCCTTGGCCCTGGCGGCTCGGGCCTTCCCTATGACGCCATTCCCCGTGGGAGTGCTGCCACGCAGCCATGG TCONS_00076234 TCONS_00076233 TCONS_00076235 TCONS_00076236 TCONS_00076237 TCONS_00076238 r 3' 24 TCONS_00076238 r 5' 0 EMBV3_02671 CTTGGTCCCGAAGATTTTATGGATGAAGAGATTATCTGTTGGTTTTGAATTGCTAAGAAA Variant GeneID:518738|GPATCH1:NM_001075778:631_cdna 312^472 1 EMBV3_28294 GeneID:518738 18 GENE GPATCH1 GPATC1 G patch domain containing 1 EMBV3_16196 CTGACCCCTCTGCTACGAAGAACTAACCAGCAGGTCCTCTTTCTTCACTGTTCTCAGTTC Gene BVV0102_152824 - 0 NULL GK000005.2:91104555-91370737 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20126 GCCTGTGAGGACATCATGCTTGCAGATGACGACTGCTTAATGATACCTTATCAGATTGGC Gene GeneID:514621|PFDN4:NM_001038540:1069_cdna Constitutive 0 NULL GeneID:514621 13 GENE PFDN4 MGC133671 prefoldin subunit 4 EMBV3_26313 CTATTGCGTCCTAGCCATCCACAACCCTCTGAGATACAGCTCCCTTCTTACAACTCTCAG Gene GeneID:781562|LOC781562:XM_002693379:17_cdna Constitutive 0 NULL GeneID:781562 15 GENE LOC781562 NULL similar to hCG1811275 EMBV3_02786 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:525433|LOC525433:XM_002688196:50_cdna Constitutive 0 NULL GeneID:525433 6 GENE LOC525433 NULL similar to histone cluster 1, H2bd EMBV3_07649 ACCGACACAACACCAGGTCCCACCCACTCAGATGTACTGAAATTCCACCACTTGGGATCT Gene GeneID:617439|TNFRSF12A:XM_002697937:610_cdna Constitutive 0 NULL GeneID:617439 25 GENE TNFRSF12A NULL tumor necrosis factor receptor superfamily, member 12A EMBV3_07616 ACCAGACCGGGACTTAATAAAGCACAGCTTGTTGAGATAGTTGGTTGCCACTTTAGGTCT Gene GeneID:781150|SAP30:XM_002689456:1_cdna Constitutive 0 NULL GeneID:781150 8 GENE SAP30 NULL Sin3A-associated protein, 30kDa EMBV3_12864 AGACGCATCGGCGGCCTGCCCTGAAAGGAAGCGGCCGCTGGGAGACTCGCTGAGCTGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16395 CCAGATGCAGACCTGGGTGAACGAAGGCTACTTCCCAGATGGCGTTTATTGCCGGAAGCT Gene GeneID:513857|CD2BP2:NM_001083682:320_cdna Constitutive 0 NULL GeneID:513857 25 GENE CD2BP2 MGC148964 CD2 (cytoplasmic tail) binding protein 2 EMBV3_43040 CTTCAGAGGTTACACAGGAAGATTACTGGAGGGACTTTAGTGGTGGCACAGTGGTTAGGG Gene GeneID:515010|C22H3ORF23:NM_001102016:107_cdna UTR3_Alt 2 NULL GeneID:515010 22 GENE C22H3ORF23 MGC160071 chromosome 3 open reading frame 23 ortholog EMBV3_04122 CGACTGCATGCTGCTCCAGCCTTATTCACCTCTTACTCCTTGGTCATCATCCTTACCCCA Gene BVT0102_210433 + 1 EMBV3_36397 GK000002.2:127533981-127560952 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103861 1 XLOC_062236 NonCoding TCONS_00103861 XLOC_062236 NonCoding NonCoding - 2:127535554-127538074 - TSS77038 524 0.099236641221374 2 0.792774910678841 0 5.75292922429317e-05 0 1.58476844105136e-05 0 0 5.56460320527245e-05 0 0.000436667924633791 0 0 0 0 0 0 0 0 0 0.00154640376219339 0.000741102749656831 0.00130350551865614 0 0 0 0.000290889870315683 0.000161346686269429 0.00021245013570839 0 0 0 XR_230464.1 LOC101903355 PREDICTED: Bos taurus uncharacterized LOC101903355 (LOC101903355), 6e-152 540 100.00 0.568702290076336 0 noncoding GTCAATGGCAGGAAACCTGGCCTGTGAAGGAGGGGGAGGATGGGGCTGTTGTGTCTGACTCTTACACAACCCCCATCCTTTTGGTCTTAAAGGAGCATCCTGGTTGGGAAGAAGGGCAGGCAAGGGGCCTCCTTCTCAGCCCTGGACAGACACCGGGTTACGGAAAGAGGGGCCTTCAGAGTCAATGCAGGTCGCTGCCCTGGAGTGGCCCCCGATCTGACGAGGGACTTCATCTTCAGGACCCTGAGCCAGGACTGGAAGGAGGGAGGCCCCGACTGCATGCTGCTCCAGCCTTATTCACCTCCTACTCCTTGGTCATCATCCTTACCCCCATCTCCAGCATTCCACCTTCCACCACTGTTTTCACCTTTAGACTGAGCACCAGGAACAAAAAGCATCCAGTCTCCACTAAGGGAAATAGAGGAACATGTGGAAGGGAATCAGGGGCTTCTCCCAGAAAGCAATGACAGATCTATCCTCCTACTTCGACAATTACACCTTCATAAAGACACTCTGAAAAATGT TCONS_00106726 r 5' 1575 TCONS_00106726 r 5' 1575 EMBV3_07351 TCCATAGGGTCTCAGAGGGTTGGACACAACTGAAGCGACTTAGCACTCATTACTGTTACA Gene BVT0102_306262 - 1 EMBV3_39350 GK000015.2:28940118-29000629 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38903 CCGGAAAATAACTTATACCAGCCCTTCTGTTCTAGGGAAATAAGTCTAGCAGTTCAAAGT Gene GeneID:516282|STRBP:NM_001075739:26_cdna Constitutive 0 NULL GeneID:516282 11 GENE STRBP MGC139542 spermatid perinuclear RNA binding protein EMBV3_16526 ACTAGTCTCGAAACGCATTTCCTAACAACTATACATTTGGTGTGGGGCTACAGCCGTGTC Gene BVV0102_314558 + 1 EMBV3_22774 GK000027.2:37240539-37246836 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156442 TCONS_00156443 TCONS_00156444 1 XLOC_095017 Coding TCONS_00156442 XLOC_095017 Coding Coding RNF170 27:37244513-37277348 j TSS116835 3548 1 TCONS_00156442_4 174 0.0856820744081173 7 0.892154474020832 0.000171368857556961 5.29853135215951e-13 0.00053919977548019 5.50505377954551e-05 0.000295403652832893 7.8969958904676e-09 8.3877504534397e-05 1.87804296734922e-06 0.000102179826143503 2.80937001167192e-13 2.26952832375926e-09 2.58260236485237e-08 2.5876580928273e-05 1.74341404381747e-12 2.77888309794959e-12 0.00200156055441668 0.00075760932352713 0.00125848211161738 0.000220901773286443 4.68366897850188e-15 0.000274207227476711 0.000146566126642909 0.000864754721811761 0.000546857121263282 1.62324946493362e-07 2.2274871335111e-07 4.64127362939316e-09 1.09251814470869e-07 1.08322737555043e-08 0.000430775200418871 XM_005226135.1 RNF170 PREDICTED: Bos taurus ring finger protein 170 (RNF170), transcript 0.0 2125 100.00 0.33173618940248 NM_001160223.1 RNF170 Homo sapiens ring finger protein 170 (RNF170), transcript variant 0.0 1375 83.55 0.361330326944758 TCONS_00156442_4 sp|F1MK05|RN170_BOVIN RN170_BOVIN E3 ubiquitin-protein ligase RNF170; 2e-127 363 100.00 0.994252873563218 6 noncoding 0 0 0 0 0.0427145539697896 0.805578401344038 -0.00125569398071665 0.980178890547301 TGCTTTTGAACTTCTGCGAAATTGTGTGTGTCATTTCGTGGCTTTTCATTCCTAACCTGGAATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATGATGATTCAGTCATAGAAGGAAAATGCACATCAAAATATTCACCCAGAAAACCAAGAGCTAGTGAGGGTGCTTCGGGAACAGCTTCAAACAGAACAGGATGCACCTGCTGCCGCCCGACAGCAGTTCTACACTGACATGTACTGTCCGATCTGCTTACACCAAGCTTCCCTCCCCGTGGAGACCAACTGTGGACATCTCTTTTGCGGTACCTGCATTGTTGCATACTGGAGATACGGTTCGTGGCTTGGGGCCATCAGTTGTCCGATCTGTAGACAAACGGTGACTTTACTGCTACCAGTATTTGGTGAAAATGACCAGTCTCAGGATGTTGTCTCATTGCATCAGGATATCAGTGATTATAACCGGAGATTCTCAGGGCAGCCCAGATCTATTATGGAAAGAATTATGGACCTCCCCACTTTACTGAGGCATGCATTCAGAGAGATGTTTTCAGTCGGGGGCCTTTTCTGGATGTTCCGTATCAGGATAATACTTTGTTTGATGGGAGCGTTTTTCTATCTTATATCACCTCTAGATTTTGTACCCGAAGCCTTGTTTGGAATTCTCGGCTTTCTCGATGATTTCTTTGTCATCTTTTTGTTGCTCATCTACATCTCTATTATGTATCGAGAAGTAATAACACAGAGACTAAACAGATGAAAAAACATGAGTTTACTAAAATGTCTGAGCTGATGTATAACATCAGACAAAAGGACCATGGCAGTATGAAGCATCTGAATATTATCTGATGAGCTTAAAACCACTTTATGACAAACATTTGATTATCATTTGGCAAATACCTAGCAATATATGACTGGAATTTTTACATGTTGCAGATTCTAATATTAAGGTTAGAATTAGAATGATTTACAACTGTATCTTGAGTCTGTGTTGTCTATAAACTCTGTGGAAAAATATGGAATTACATTAAATGGGATGCTTATTTTTCTTGTATCTTCTCCGCGCCCCCCCCCCCAAATTACTCAGATTAATTGAATATTTAGTGGGATATTGTCAGATGTAAAGTTTATCAGATTCATCCTTCTCAGTGAGTACCTACATGATAATATACTGCTATGAGCCTCACCAAAATATTTTTGTTACAATAAAATATTGTACGATATTGGGGAAAAGTCAGTGTTTCTTTGAGTACTAGCTAACTTTTGTGCATTTGAAGCAGTTCTGCTTTTCCACTCCAATATAATTCTTTGTTATCAGCTAAAAGTGAAAGAAGAAACTTGAACTTTGTTAATTTGATTTCATTATCTTGGTTTACAGAACACTTAATCAATAGAGGAATTAACAAACTGGAAGACATTTGTCTCCAGTCAGCACACTTGATATTCTGTTACGGCATTTCCTTAAGAGTTTGGTCCTTTTATAGGAGTAGCATTTAAAAGTTTCAATAACTTCTAAAGGGAATTTTGTTCTTCAGGAACCTGGGTGATACAGCAGACACATGGCAGCTCAGTGCCTCCCTCGGGAAGGTGGTTCTCATGACTGTGAGCACCAAAGACCTTAGGAGGGGACTCTTTCCTGCTTTGTGTTAGTTGCTCGGTCGTGTCCAAGTTTTTGTGACCCCATGGACTGTAGCCCAACAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTAGCCATTCCCTTCTCCAGAGGATCTTCCCAACCTAAAGATACAACCTGGGTCTCTTGAATTGCAGGTGATTGTTTACTGTCTGAGCCACTAGGGATGCTTATAGAAGGGTACTAGGAGCACGATTTAAATCTGACTAGAGAAATTAACAGTGGGCTGTAGCAACAGGTTGACAGATTTGGTTATTTTTCTGTCAGAAAACTGTTGTAATACTGTTCCTAGATGGCAGGATGTAGCCCAGATTCATCAGGCCTTGTGCAGAAGGCAGTGAGTTACGGGAGTTATCTCGGTGTTTGGATGGCCACAGCATAAGTCGCTAAGCTCCCCTCTGCAGTTTTCTGTTTGCGAAGAATCAAAACCACAAGTATTATGGCATCTGAAGTCCCTCGGCGGGCACCGCTCATGAATGTCCTGGGCTACAGGACATCCCCGGGCTTGGGCAGCGTCAGCTGTCCCCCTGCAGTCCCCACTGGTCTTCCTGTCCACCCACACGTCAGGGGGCCTCACCGTGGACAGACGGGGAGAAACGTAGATCAGTCCCAGTCTTCAGGTGAGCCAGGTGCTGTCAACTGATGAGATGCTGAATGGTGGTATGTCCACAACAGCGTCTTGTCATTTGGGCCTAAGACCAAGCTGCTGCTTATCAGAGAGGAAAACAAAATTCTTGAGTACAGCACATTGTATTTAAAGCAATTTCCTGCACACTTTTCACTTTACCCTCAAGACAGTTATGTGAAGGAGGCAGGGCATTACCTTCCTCTTCACAGATGAAACTCCTGATGTAGATGAAAGGGTTTTTTTCTGTCTGAAGCCAGGCGCAAGTAAGTGACTGCACTGGTATCAGATGCCTGGGATTCCTACATGGGGAGAAACTGGGATCCTTTGGAAGACGTTTGGAACATACGTAGGAATAGGAAAGGTCTAGAAAGATGACACATCACAGCTACAAGAATCCTGATTCTACAGTTGCCAGTCTACTTCTCACAGGGTAGCACATTTCATAGAGAAACATTTCAGCTGCACTGACTTGGAAAGCAGTGAGTAGGAGTTTGTTACACCACCATTTACTAGTCTCGAAACGCATTTCCTAACAACTATACATTTGGTGTGGGGCTACAGCCGTGTCATTTTTTAAAGGATTTCATTTTCTGTGCATGTGTTCTGCTTCAAGTGCCATGCTTACCACGCTTTTATTGTAATATCTGGAATTCCTTCTACAGCTTTCCTGGTAGAGGTGTATTGTACCAACTTTTGTAACATTCAACACTGTGTGAAGTCTTCCTAAAGTGAAAAGGGGACATGCCGGCATCTCCGAATTCTAGACCTGTTTCTTATGTCACCTTTATTGATCACTGATGATAAATGTAAAGGGATCTGAGTATATAAAGCAGGTAGAGTCAATCAGTATTTTAAACATCATAGTAGTACTTCTGTGATTCAGAGTTAGAGCTTATAAATCAAAGCAACAATTTGGATTTTTATAAACAATAATACTGTAACTTTCACAAAAACAGATGGTCCAACCCCACAAGCAGATGATAACTTGGGCAGCTCTGTGGGGCGCGAGACGGAGGAGACAGTTGTCTAACTGCCCACCAGACCAGTGGTTCCAGCGACCAGCGTTCTCAGCACCTGAAAGCAAGCAGCACAGGACAGGGCTGTGGTGGTCCCTGTGCTGGGCAGATACCTACCTCACAGAGGTGTTTCAGAGGACTGACAGTTTGGTTCAAACTTTGTGATTTAAGAGTTTGTCAAGCAGTTATTCTTTTGAATAAAAGCAACATATGTAAAATTTAACA EMBV3_31757 CAGCAATCAGCAGCTCCAGATGTCCCTACACGATTTGTAAAGAGCTGAAGACCTCTTTAG Gene BVT0102_113775 + 0 NULL GK000003.2:95601696-95656091 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179407 1 XLOC_109180 NonCoding TCONS_00179407 XLOC_109180 NonCoding NonCoding - 3:95643079-95644430 - TSS134166 1351 2 TCONS_00179407_3 56 0.321983715766099 1 0 0 0 0 0 0 0 0 4.3780247733662e-06 0 0.00017359420554355 0.000174527130041595 5.29338416269714e-05 0.00028883952821824 0.000532724425728603 0.000512045891614854 0.000312794579930273 0.00090937665774663 0 0 0 0 1.09854564885508e-05 4.07433806109413e-05 0.000366065781126822 0 0 0 4.26581161014867e-05 5.39001680751666e-05 0.000186909252337182 0 noncoding GGTATTTTACTTGCTTAGAAGAGGACTAAGGAATACAGGAGATTTTGAAATAAAAACTCATACCTCTAAAAAATGTTTTTCATGAAATGGAAATAAGCACATTGTCCTATAACATTTATGAAGGAAATCAAGAGTGAAATTTGAAGGAAAGTAAGAGTCAAAGAATTTACTTGCTTCAAAGACTCAGGAAAGCACTTAGATTTGGTTTGGATTTTTAAAGAGACTTCTCCTGTGACAATTCTTCGGAAGAAATGGGTGTGTAAACTTACATAACAATACTCCATTTAAATTCATTAATTCACTCAACATTTAAGTGTTTATGTGCCAGAAACTGCACTAAGCACTGGTGGTAGTCCCTGTTCTCAAGGGCTTAGAGTTTTCCCTTATTCCAGTTACTCAGCAGCTACTATGAAGCCAGATGTTGTGGATACAACAAACAGGAAACAGAGTTCCTACCTGCATTCAGCTTATACTGGAGGAGGAGGGAAATGCCTCAAGAATGAGACACACACCTAACTTAACAAGGACGACATATAAGTGTTATATGCGTTACTTTTGAAAGTGCGGACACTTCCTTCATGGGAGACACAAAGAAGGGAGTGATTGATTCAGGGAGAAAGGGAGGGGAATTTAGGAACTTCAGATACAGCTCAGCTGAGTCCTCAAAGAGGATTACACGCTCACCTGCTGACCTTGGGGGAAGGGTTGCAGAGAGAGCAACTGGAGCTAAGGCAGAGAGGTGTGAATAAGCTGTTGTGTTTGACAGGCCTGGAATATGAATGTGAGGGATAAATCATGGAGTCTTCTGTAAGCCACATGAAAAGACTGGACTTTACCAGCATATATGAAAGGCCCCTGATGGGTTTTATTCAGAAAACCAGCATTTGTGATCAGGTTTTTCTGGTGTGGTGAGACACGGATTTACATAGGAATGAGAAAAGAAAAACACTAGATAATGATGTCACCACATGAAACAACAAAGGAGACTGCCCAGTTAGAAAATTAAACCCCAATCAGGAAAAAAAATTAAGCCACTTAACTATCCAAGTACTTCTGGTAAAGTTTTTAATCAACATCTTGAAAAAGTAGAGGAAAGGTTTATACATATATTATGGATTATAACGTCTACATATCTATTTTGAGTTTTCTAAAGAGGTCTTCAGCTCTTTACAAATCGTGTAAGGACATCTGGAGCTGCTGATTGCTGTACAAAAAGAAGTGAAGCTATTTAGAAGACAAGTCTTTGACACATAGGGAGAACCATGAGTAACAGAAGGTATTTCTCAAGTAAGGTTTAAAGGTTTCCAAAGTTCAAGATAATCAAGTTCTCTTAAATCAGCGCGTTAAAAGN TCONS_00174163 . 5' 16943 TCONS_00174163 . 5' 16943 EMBV3_13013 AATGAACCCTTGTCTCTTAGACCTTCTGTGTTGGCAGGAGAGTTCTTTACCACTGGCGCC Gene BVT0102_226285 - 1 EMBV3_04331 GK000006.2:108849732-108851269 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16290 TCCACCATCTCCAGCCACCTGGCCACCAAGCACCAGCTCTGCCAGAGCCTGGCCGGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21606 GCTGCAGACCTTATTTCCTCTTAGGTTCCTGTGGTCAACACTTGCTGTCTTTGCACTCAC Gene GeneID:506520|WNK2:XM_002689849:38_cdna Constitutive 0 NULL GeneID:506520 8 GENE WNK2 NULL WNK lysine deficient protein kinase 2 EMBV3_03194 CACACACCAGGCTCGGGGCTAAGTGCCTTAAACATATCACCTAACCGAATCCTCCCTGTA Gene BVT0101_014733 + 0 NULL GK000014.2:16361546-16424022 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26027 TGGAACAGATTCTAAGTCACCGACTGAAAGGTCAAGTAACCTGGTTTGGTTACGGAAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15295 GGCAAAGAAAGAGGGGAATGAGAAGAGCTAACCTTTTTCTGCTCACCTTTTGGCGGTCTG Gene GeneID:539595|APOF:NM_001128502:25_cdna UTR3_Alt 1 NULL GeneID:539595 5 GENE APOF NULL apolipoprotein F EMBV3_10828 TCCCACCTACCAGTCATGTTGGTTCACATGCAAAGTCAAATGCCAAACGCCAACTGGTGC Gene GeneID:535900|STARD8:NM_001102517:68_cdna Constitutive 0 NULL GeneID:535900 X GENE STARD8 MGC166295 StAR-related lipid transfer (START) domain containing 8 EMBV3_16607 TGTGACATTACCCCCAGCACCATTTTTGAACAGCAACTTTCCAGACATTTGAAGCACTTT Gene GeneID:515999|SAR1B:NM_001035315:28_cdna Constitutive 0 NULL GeneID:515999 7 GENE SAR1B MGC127165 SAR1 homolog B (S. cerevisiae) EMBV3_16588 AACGCCACCTCCTCAGGGCCAGCAAGATGCAGTTTGAGATGCACGACAACGTGAAAGGCA Gene GeneID:511870|CNFN:NM_001075542:187_cdna Constitutive 0 NULL GeneID:511870 18 GENE CNFN NULL cornifelin EMBV3_18414 AGCACAGCAAATCAGGCAGCACTTTAGATAAGAGAGGGAGCGGGTCTCGGAATTCTTGAG Gene BVT0102_317712 + 0 NULL GK000019.2:6464110-6531782 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098438 TCONS_00098437 1 XLOC_058683 NonCoding TCONS_00098437 XLOC_058683 NonCoding NonCoding - 19:6470089-6471967 - TSS72813 1878 2 TCONS_00098437_4 52 0.281682641107561 1 0 1.81119459268507e-06 0 9.85516471212059e-06 0 6.57238892879742e-07 0 0 0 2.94094689694981e-05 0 0 3.01178429151799e-06 0 4.00766544979053e-05 9.46467813183373e-05 0 0 5.79329989401792e-11 3.05469742047145e-05 0 0 0.000145240589649655 3.78916042261161e-05 4.53986875740483e-11 1.48946897422858e-11 4.50189803242145e-05 1.68163506245957e-11 0 0 0 XM_001249617.4 LOC781298 PREDICTED: Bos taurus phosphatidylcholine transfer protein-like (LOC781298), transcript variant X1, mRNA. 2e-69 268 68.97 0.339190628328009 0 noncoding TTATGTTTGGGAGTAGCTCTGGATCTTGGGAGGATAATATCTTTTGCACTCTTTGGGGATAGCTTTTGCCCCCATGGAGTTGTTGAATACTTACTGCCAGAAATATCTATGTACTGTTTGTCCAGTTGAATCCTGACGGGATATTCAAAGGATTTTTTTTTTTTTTTTTTGAGTAGCCCTCTGAGTAGAGATTGGCCAAACGTGGAAGTTGATGTTCAGAACCTGATGGGAACTTTTTTAAGGCCTTTTCCTCTAAGCTGAAGTGAAACTATGTCACCAGAGGGAAAGAAACATTCTGAAGCCTTTGTGGAAGAATTTACCTATGCACTCCACAGACACATAGCTATAAATCTGGAACATAAGACCTTTTGATCTTCAGCTTAGTTGAAGATCTTCCCCTGATGTAAAGAAGGGAATTGAGGATAACATTGTTGGATGGGTGAGATGGCCTCCATATCATTCAGATTGCCACCTGAGAAACTGAACCCCAGTATTCTTGCTGGGAGAACCCCATGGACAGGGCAACCAGGCAGAATATAGTCCATGGGGTCACAAAGAGTCAGACATGAATAAAGGGACTAAGCGGCAGCAGCAGAACTTGCAGTAACTGTCTTACAGAGCAAGCCTTTTTAACAACAGAAATGCTCTGGAAATAATTCAAAGACTGCTTATCCTTTCCACCAATCCCCAAATGTACCCTTTAATGTAAAAAATCTTGCATATATTGTCAATGTGCTGGACTTAAGGAACAAAAGTCTGTGGTGCAACTTCCATTCTTTGTGCCTTTGAGATGTAGGTATTTACAGAGTCTCCTCTAGGAAGCAAGGGAATTGTTATCAGAAGAGAGGAAAAAAAAAGAAAAGTTTATTTTAAAAATAAGAACTATCAAAAATCTTAAAAGTCTCTTTTACAAATACTAGTAAAATACTATCTTATCAGGTAAACTTAATTTATTCCATCTTCCAGAAATACACTAGACCTGTTTTTTTTTTTAAAATAAACTAGAGAGTTTCATATTATATCTTTCTCATGTCTAAAAGTTTTAAATTAAACTTAGAAGAGCTCTGCTTGTATGTTTTTGTATTTCTGTATATGGATGCTATAGATGGTGATGTGTTTGTGCTTCTGAATGGTATTTCCAAAATTATTTTTTTAAATGCTACTTAATTGGCTTAAAGATGAACAAGCATTATACAAATCAAGTATACTCTCAGAAACATAGACTAACCTGTATGTTTTTCTAATTCAGGCAATTGTATCTAGGTTTGATAGAAGTGAATTAAGGTTTTATCATATCTGTTGTAAATTATTCATTGAGAAAAATAACTTTGTATGTGTTAGGGACACTAAAATGGAGGAAGTCTTGTTCAGGCTTCAGTAGCAGGAGAGCAGGCCTCTGACCTGGCTACCGACCTGCCTGGGCACTGCTTGGATTCCATGCCTGCCTGAAAGCACAGCAAATCAGGCAGCACTTTAGATAAGAGAGGGAGAGGGTCTTGGAATTCTTGAGCCCTGGAAGTCTGGCCAACTGCTCAGGGCCTAACAAAATCCTATGACTCACAAGCTGAAACAATTAGCATTGTAAAAAGACTAAAGTAAAACCCAGAGCTGCATTTTTGTGCCCAAAATGATGATATCAGTTTGTGGCCTGGGATGACAAGGGGGAGTCCCTGAAACTACGATCTGAAGACTCACCCATGGAGTGGACACCCTACCAAGGACCTTTTCCCAATCTGGATTCTAGATTGCTGTTAACGAGGGACTTCCCAGCATACTGTTTAAGTCCAGATGTTGGTCAGCACAATTTGGTGATGTATGTGCCATTACTCTTCTCTATTGTTTCTCTTTTCTTTTAATGATTGTATACTGAAATTAAAT TCONS_00092079 . 3' 5981 TCONS_00092079 . 3' 7858 EMBV3_26630 GCCTTTCATTCTTCCTCAGGTATCAGCAGACATGAGATAATCCATGCAGGAGGCAGAGCC Gene BVT0102_150049 + 0 NULL GK000018.2:60305340-60330958 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084568 TCONS_00084573 TCONS_00084576 TCONS_00084574 TCONS_00084567 TCONS_00084571 TCONS_00084578 TCONS_00084569 TCONS_00084575 TCONS_00084553 TCONS_00084565 TCONS_00084572 TCONS_00084570 TCONS_00084577 1 XLOC_051611 Coding TCONS_00084553 XLOC_051611 Coding Coding ZNF813 18:60249407-60319704 o TSS63323 2730 1 TCONS_00084553_5 382 0.0516483516483516 3 0.961206896551724 2.52497770179184e-28 7.32128272347324e-05 2.64773766901073e-05 2.41666649282839e-44 7.14588382616191e-06 1.16319369709598e-14 5.20743179706221e-15 6.89895256466895e-06 0.000125521500318244 0.000247611669946725 0.000125289882099542 6.05717524140109e-08 0.000116832805927932 0.000138049083764177 7.57836827986851e-48 0.00096979156971245 0.0030776383821281 0.00816634163098204 0.00133954644070683 3.34266233984204e-58 1.04261015984907e-70 0.00131771010009641 0.000133072487640884 0.0019811878051263 5.52408886671619e-49 3.52354640718496e-24 5.80453922905912e-05 0.000274946369605592 0.000193231854300871 0.00121724696053728 XR_238505.1 LOC101905467 PREDICTED: Bos taurus zinc finger protein 160-like (LOC101905467), 0.0 4599 99.53 0.944688644688645 NM_001102657.1 ZNF836 Homo sapiens zinc finger protein 836 (ZNF836), mRNA. 3e-165 587 71.75 0.428937728937729 TCONS_00084553_5 sp|Q6ZNA1|ZN836_HUMAN ZN836_HUMAN Zinc finger protein 836; 7e-105 334 44.23 0.99738219895288 7 coding 0 0 0 0 -0.192015185919356 0.487080714479582 0.0108137176355743 0.82370357612451 GCACAGTTGACCTTCAAGGATGTGGCCATAGAGTTCACTCAGGAGGAGTGGGAATGCCTGGACCCTGCTCAGAGGGCCTTATATGTGGATGTGATGTTGGACACCTTCAGGAACCTGCTCTCTGTGGATATTTCTCATCTATACATCTGGAAATTACAACTAAAATCACACACTGATAGAGGAGGAGTATGCCGAACAGTGATTTGGGGAAGAAATGAAATCCCGGAAACCAAACATTTTAACGTCCCAGAAATTCAGGAGAACATGAATGACTTCAGGTTTCAGTGGAGAGATGATGAAAGAAATTACAAAAATATCTGTACATCCCTTAACCAAGATGTCACTGATAGTAGAAGTCAGCATGGTAGAAGGGATGCAGTAAACAACCGTACTGGAAATAGACTTGTGTTAAGCCTTCAGGATGAACTACGTATGTTTAAACATCAACAGAAAATTGCATTTGATCAAGCTGATAAGTATGTCAACAGTAGCTCCTCATTTTCACCTCTTCAAATAGTTTCTCCTACTCTCCAAACCAATATTTATAATATATATGGGAGTGACTTTATGGATCCTTCCATACTGATGCAAAACCAGATCCCACACAGGGTAAGGCCTTACAAATTGTATGAGTGTGGCAAAAAGCTTCATCAGGGCTCAAATTTCAGGAGTCATCCGAGAATCCATATAGGAAAGAAATTACACATATGTGATGTATGTGGCAAGGTCTTTAGCCGAAATTCAGATCTTGTCATTCATCAAAGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGTTCTTTAGTACAAAAGGAAAGCTTTCAGTTCATCAAAGAATTCACACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGTAAAACCTTTAATCAGAGCTCAATCCTCAGTCGACATAGGATAGTCCATACAGGAAAGAAATTGCATCAATGTGATGTATGTGGCAAGGTCTTTAGCCAAAATTCTGACCTTGTAATTCATCAAAGAATTCATACCGGAGAGAAACCTTACAAATGCAATGAGTGTGACAAGGTCTTTAGTCAAAAAAGAAAGCTTTCAATTCATCATAGAATTCATACTGGAGAGAAACCTTACAGATGTAATGACTGTGGTAAAACATTTAGTCAGAGCTCAACCCTCAGTCGACATCAAATAATCCATACAGGAGAGAAATTACAGAAATGTGATATGTATGCTAAGATGTTTAGCTGAAATCCAGACCTTGTAATTCATGGGAGCATTCATACTGGAGAGAACCCTTAAAAATGTAGTGTCTGTGGGAAAGCCTTTCATTCTTCCTCAGGTATCAGCAGACATGAGATAATCCATGCAGGAGGCAGAGCCATATAAATATCATGTATGTGGCAGAGTCTTTCACTGAAGCCCTTGGACTTCATCAGGAAATTCATAGTAGAGAGAAACCTTACAAATGTAATAAGTGTCTTTTGTCAAAACAAACCTTGTGAGTCTCCCAAGAATTCATAATAGAAACCTTACAAACGTAATATGGGTGTGACAGGGTCTTTCTTGAGAAGACAACCCTTTTTTACTAGTTTTACTACCCACAAATTCATATGGCAGAAAAGCCTTCCAAATGCAGTGAGTGTGGCAAGGTCTTTAATCACAAGGGAAACCTTACAGTTTACCAGAGAATTCATACTGGAGAAAAACTTTACAAATGTATTGAGTTATGCAAAATCTTTTATGAGTTGCCAGCCCTTGCAAAGCATCAACTGAATTCATACTAGAGAGAAACCTGATAAGTGAGTGTGGCACCATCTTTAGTCAAAGTTCCACTCTTTTAAGTCTTTGGATAATTCGTAATGGTGAATTTGTCAGAAGGAGACAATCTCCATTGACAAATGCCTGGGAGTCATCCTGCCATTTCCCAGTGATGTACTGACATACAGAGGCACGGCATGTTACAGAGAAAAGAAGACTTGTTTTCCTTTGGATTTAAATTCATCCTGGGGCTGGTCCCTGCCCTTGGCTTTTCTTCCACATAGGTCAAACATTTTGCTTCTTCAAACTGTACTACCTCTGCTCCTGCTGTAGCAGAAACTAAATGAGGCACCCCATTATGTTAGCCCACATACAGTCCTTTTTCTCTTCATCCCATAAGAGAGGGAGATGTTTGTTCTCCCTCTCTTTCTTGCTTATTTGCAATCTGAAAATGATGCCCTCTAGCTACACTTGGCATTTATCCTTCCAAGAAAACATTACTTCCCTCTCGGAGCATTCTTCATTCCAAAAAGAATGTCATGGGACGATGACCTCAGAGACCACCAGAACCTGTTCTTGAATCGCCTCATGCCAGCTGTGATGATCTCAATTCACCCAGGAAGGGGAGAAGAATGCAAGACCACACCAGCCCTCATTCTTTTTTTCAGCCCCATTTTCCACCTGGGGGAAAAAAAAAAAAAAAAACCCTGAAAACCTTAAGACCTCTTCCAACTTCCCAGGAAGCAGGGGCACAGTTTTTGACACATTGGCCTACTGTGTTCCCCCTTTACCTGGCAAAGTAATAAAGCTACTTTTTTCTACTCCAAAACTCTGTCACCGTATTTCTATTCAGCATTGGAGAACTTTTGGGAACAATCCCCCAGCCTCGCCCTATCCACCCTTGGAGGGTGGCAGGACATGCCACGTTCTCTCCCTGATCCTGGAGAGCCTGCCCCTGAGGCCCCCCTCTTTCCCAGC TCONS_00084552 TCONS_00084565 TCONS_00084565 s 5' 0 TCONS_00084552 TCONS_00084565 TCONS_00084565 s 5' 0 EMBV3_22051 TGGATACTCAGAAGAATATTCAAGTTCCCAGGGAGGCATGGTACTGGTTGAGGCCTGAAG Gene GeneID:512655|CCDC75:NM_001046127:92_cdna Constitutive 0 NULL GeneID:512655 11 GENE CCDC75 MGC137508 coiled-coil domain containing 75 EMBV3_25385 CCGCGGAAGGGCTCTCCTTGTCTCTCATCAAATCCGAGTGTGGCGATCTTCAAGACATGT Gene GeneID:515324|PROX1:XM_002694257:239_cdna Constitutive 0 NULL GeneID:515324 16 GENE PROX1 NULL prospero homeobox 1 EMBV3_43279 TGGGACCAGCAGAGGGGTTGGCTTTGCCAGCCCCATCCGATCCCTTGCTTTGCAAATTTG Variant GeneID:509798|RBMS2:NM_001034365:971_cdna 611^690 2 EMBV3_33426 GeneID:509798 5 GENE RBMS2 MGC128164 RNA binding motif, single stranded interacting protein 2 EMBV3_01568 ATGAGCTGCAAGAAGATGCTCGGACTCGAGCACCAAGACTTCAGATGCTGCAACGACCCC Variant GeneID:767915|C12orf54:NM_001076992:99_cdna 323^365 1 EMBV3_07822 GeneID:767915 5 GENE C12orf54 MGC127966 chromosome 12 open reading frame 54 ortholog EMBV3_02354 CCTTCACCAGGTCTGTCTAGCAGTGGTGGTTTCTTTGGCACAACATTAACTACTCTACGG Gene BVT0102_169427 + 0 NULL GK000005.2:38474590-38571961 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194702 TCONS_00194700 TCONS_00194701 TCONS_00194703 TCONS_00194697 1 XLOC_117824 Coding TCONS_00194700 XLOC_117824 Coding Coding PPHLN1 5:38395799-38572001 j TSS145241 1688 1 TCONS_00194700_2 349 10 0.990476785035272 0.000828857777954743 0.000815170618213614 0.000450755887056762 0.00100741631091314 0.000282891093412403 0.000826074817660195 4.45629334711385e-06 0.000551069086758832 0.000864760471942612 0.000683743264931003 6.25956999846923e-05 6.06597201532985e-05 0.00019058828218873 0.000859186006693988 6.86834930792098e-05 0.00426192293243945 0.00513254153155106 0.00311849228107387 0.000260932153755644 0.000684634838116166 7.01566595675273e-05 0.000401100811548156 0.00387398282310634 0.00270133737079859 0.000376881000651131 0.000232899407574205 0.000465738953446615 0.00063826403999931 0.000806640656616912 0.00133989042652854 XM_005206422.1 PPHLN1 PREDICTED: Bos taurus periphilin 1 (PPHLN1), transcript variant X5, 0.0 1912 100.00 0.627369668246445 NM_001143788.1 PPHLN1 Homo sapiens periphilin 1 (PPHLN1), transcript variant 7, mRNA. 0.0 1474 90.71 0.626777251184834 TCONS_00194700_2 sp|Q8NEY8|PPHLN_HUMAN PPHLN_HUMAN Periphilin-1; 0.0 532 85.04 0.916905444126075 1 coding 0 0 1 0 -0.166065014066906 0.354818423210104 0.00251336853484518 0.964976960333995 CGAGAAGGTAGCTGCTGTGTCTCTTCCCGGCTTTCCTTTGACCCAAACCCCGGAGGTGGGTTTAGGGGCGGGCACTTTTGCTGACGTCTTAGTGTGCGCCGGAAGTGCCTCCCCGGGAGCGCGGCGACGAGCGGACGACTACATTTACGGGATCTCCAGGCGGCCCAGATGGCTTACAGAGGAAATGAAATGTGCTCTGAGGGACGATATGACTATGAAAGACTTCCAAGAGAAAGAGTATCTCCTCGAAGTCACGCCAGTGATGGCTACCGTAGAGTAGTTAATGTTGTGCCAAAGAAACCACCACTGCTAGACAGACCTGGTGAAGGAAGCTACAATAGATATTACAGTCATGTTGATTACCGAGACTGTGACGAGGGCCGCAGTTTTTCTCATGATCGAAGAAGTGGTCCACCTCACAGAGGAGATGAATCTGGCTATAGGTGGACGAGAGATGATCATTCTGCAAGCCGACAGCCTGAATACAGGGACATGAGAGACAACTTTAGAAGAAAAAGTTTCAACTCCTATTATGTGAGAGAGCGGTCACCTCATAAAAGAAACACTCCTTTTTTCAGAGAATCGCCTGTAGGCCGAAAGGATTCTCCACACAGCAGATCTGGCTCCAGTGTCAGCAGTAGAAGTTACTCTCCAGAAAGAAGCAAAACTTATTCTTTCCATCAGTCTCAACATAGAAGTAAAGAAAGACCTGTTCAGCCTTTGAAAACATCAAGAGACACTTCACCCTCAAGTTCTTCAGCAGTTGCTTCATCAAAGGTATTAGACAAACCCAGTAGGCTAACTGAAAAGGAACTTGCTGAAGCTGCAAGCAAGTGGGCCGCTGAAAAGCTAGAGAAGGCAGATGAAAGTAACTTACCTGAAATTTCTGAGTATGAGGCGGGATCCACAGCACCATTGTTCATTGACCATCCAGTAGAACCTGAGTCAAATGCAACAGATGGCATAGAATTGTTCGAAGACAGTCAGCTAACCAGTCGCTCTAAAGCAATAGCAACAAAAACCAAAGAGATTGAACAGGTTTACCGACAAGACTGTGAAACTTTTGGGATGGTTGTGAAAATGCTGATTGAAAAAGATCCTTCATTAGAAAAGTCTATACAGTTTGCATTGAGACAGAATTTACATGAAATCGGATTCATTTCCTCAAGTCAAGATGTCACAAGTTTAAAAATAAAACCTGAGACTCAACTACCTTGAGACAAAGGAGTTGTTTACTTTGTTGAACTTCACTAAACTAGAGAAATTTTACTCACAGATGCATTTAAATATAGGTTCAGTGGATACTTTCTTTTCCCCTCTCCCCAAATTACATTCAACATTTCACAGCTGTTTATAACTTGCCATCAGCATTATTCTGGTGCGCTTGTCAGTGTTAAATCTGTTTGTTTTATTTTTAAAGCTTTTTAAAGTTTTATTTTAGGATAGATGAATTCAGATACATGCCAGGGTATGTATGTTGCAAAATGTTCTTGATTAAAGAAATTTGTTTGTAAATTATCCATTGTTTTTGAGTATGCCCAATTGATGTGATAAAGTTTTGTCTTACCATAAAGCCTTGATGATCAACAGGGGGAAAGCAGATATTGTGAAGCTTTTGTGAACTTTAAAAGTACAAAATAAAGCAACCAGTTTTAAATAATTAGATCGTTTCTTTAAAAAAAAAAAAA EMBV3_08139 CAGTGCATTGAAGACTGTCCAGCTGAGATGGTGAACCGTGGGCAGATGCTTCCTGAAGAA Gene GeneID:782990|LOC782990:XM_002684623:115_cdna Constitutive 0 NULL GeneID:782990 1 GENE LOC782990 NULL hypothetical LOC782990 EMBV3_11799 TCATTCGTGGGGATTTCTGCAGGAAGGGAGACCCACTTTCCTGCTCACAGGTTGCTTGCT Gene BVT0102_170512 + 0 NULL GK000010.2:36600766-36618283 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21320 AAAACTACTACAGCTGGCAATTCTTTGGTGCAACCAGTATTGAGGCCTGTGCAGGTCATG Variant GeneID:535254|POGZ:NM_001163190:130_cdna 168^233 3 EMBV3_04855 GeneID:535254 3 GENE POGZ NULL pogo transposable element with ZNF domain EMBV3_42678 ACTGGCTGCTCCTCTGCGAGAACAATGCAGTGGCCTGAATCCCTTCTAAACGACTTGGCT Gene BVT0102_029803 + 0 NULL GK000019.2:54552470-54559529 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097814 TCONS_00181507 TCONS_00097813 TCONS_00097812 2 XLOC_058340 XLOC_110623 Coding TCONS_00097814 XLOC_058340 Coding Coding BIRC5 19:54557099-54566854 = TSS72385 4127 1 TCONS_00097814_2 142 0.0566997819239157 4 0.577301619848267 0.001311816993683 0.000510133982274302 0.000548824022257987 0.000875373302322569 0.000841535681124302 0.00039252054146391 0.000203912156788286 0.000112145623955615 0.00018704207229861 0.000386867786884786 6.25479857743445e-05 6.72614007911032e-05 0.000141451756523179 0.000646800919740804 0.000573327518654072 2.30661015347372e-08 0.00150335010187889 0.00361196874810341 0.000147469270578478 0.00171306579307698 0.00026914580355611 2.55717415426851e-09 0.000935139313048154 0.00090664175035536 0.00038148734177262 0.000160006684083774 2.83759193098237e-08 0.00021576312959767 5.60637086035552e-05 3.56543752413329e-09 NM_001001855.3 BIRC5 Bos taurus baculoviral IAP repeat containing 5 (BIRC5), mRNA. 0.0 2984 99.88 0.401744608674582 NM_001168.2 BIRC5 Homo sapiens baculoviral IAP repeat containing 5 (BIRC5), 0.0 648 81.71 0.16089168887812 TCONS_00097814_2 sp|Q6J1J1|BIRC5_BOVIN BIRC5_BOVIN Baculoviral IAP repeat-containing protein 5; 1e-101 291 100.00 0.992957746478873 1 coding 1 1 1 0 -0.130239158537527 0.71412817417692 -0.0211553538216494 0.709488566979563 ACACAGCTTCCCACTTCCCAGAAGGCAGCGGGAGGCGCGTTCCCGACATGCCTCGCGGAGGCCGTCAACCGCTGGATTTGAATCGCGGCACCGCTCGGCGGCGGCGGGATGGGTGCCCAGTCTTTGCCTCCGGCCTGGCAGCTCTACCTCAAGGACCACCGCGTCTCCACGTTTAAGAACTGGCCTTTTTTAGAGGGCTGCGCCTGCACCCCGGAGCGGATGGCCGCGGCAGGCTTCATCCACTGTCCCACTGAGAACGAGCCCGACTTGGCTCAGTGTTTCTTCTGCTTCAAGGAGTTGGAAGGCTGGGAACCAGATGACGACCCTATAGAAGAACATAAAAAGCATTCATCTGGTTGTGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAGAATTAACCCTCAGTGAATTTTTGAAACTGGATAAAGAAAGAACCAAGAACAAAATCGCAAAAGAAACCAACAATAAGCAGAAAGAATTTGAAGAAACTGCAAAGAAAGTCCGCTGTGCCATTGAGCAGCTGGCTGCCTTGGAGTGACACCTCCCGCCACTGCTGCACGGCGACACAGACATGTCGTTTCCAGGGCACACCCCTCAGCGTTACCAGTTTTTCTCTGGGGCCTCTTAACTGTGCCTTAGGAAAGCAGAACATCAACATTTTGAAATGAGAATATTTAAACTATTTTTTATTTTTTTCTTGAAGTTGATGCCAGGGTCTACTTCTGTTATATAGCTGGAGCTAAGTACAGTAACTGACCTGTCTTTTCTCTTTGGTAGTTTTCGTTTTATTGCTTCCTGGACTTAGCAGGGTGAGGGAAGACGTTTGCTCACGTGGGTAGAGCTCTTTTACAGCAACGCGTTTGGGCTTCACGAAGCTGGTGACTGGCTGTCCAGCTGAGATGTGATGCCTGAATGTGATCATAGGTCCATTATGACTGGACAAACAGGATTAAGAATGCCATTTTAAGTTTCACTTGCATAATAATGTGCACTTATGTTCCAGATGTTCTACATTATCTCACATTGATGTCTGCAGATCCTGTGACCATCTCTTTTACCCCATCAGATCTGTGGTGTCACAGCAGCTCCCTTCCTCCCAGACAGATTGTACGGCCCATCCCTGCCATGCCTCTGAAAGTGCCCTGTATGTTAGGGGTTCCTTGCCATCCCATCTTGTGATTTTCAGTTTCACAGGGGTAGCCATGGGATTAGACCCCAGGCTCTGCCTCTGGACTTGATCTGTGCCAGAGTCCTTTCTGTGACTGCAGTATGTGTGACTTGGTGAGGGGGATGCAGAAGGACTGACGTCTTGAGAGTAGAGCTGGCCTCATGCTTTGTGGTCAGCTTGAAGATACTTCTGCCATGGCTCCTGGCAAGGTTGCAACATTTTTCTACAATAGACAAGGAGGTCTTTGATGCAGAAAAGCAGTGTTTCAGAGGCCTGGCTCACTGCTTCTGGATAGCAGAGCACACAGTCAGAGTGGATTCTTCCTGGGGAGTCCCGCTGTGGACCAGCTGTCATCCATTGGGTGGGGCACACAGGGTCAGGATGAAAAATCTGAGGAAGGAGTTCATGGACTTAATTACTAATACTCTTCAAATACCTACTTTCCATTAATGATGTGCATTAGGCAACTGATAATTCTCCTGTCTTTCCAATGTGAATCTTCCTAAAGGAATAAATTAATTTAAAAAATAGATTGCAAAACCTCGTTGGGAAAAACTTTAAAAAAAAAGAAAAGCATGTCTTTTTATGTTGTTTTCAGTCTTGCAAGATCATAAATGCAATGATGTATGAGTTTCAGCCCCAGCACAGACTAAGCAAAGAGTTGGAGCAAAAAAAGCATATGGAACACCCACTCCAGCCCCAAACTGCCCTCTAACAGGATGCTTGCCTTGTGGGCTTGGGCTTGGGCCTGGCGCCTATTGAATTGGAGCTGCAGTTTCCTCACCAGTCATGCGGGGATCCTAGAAGCTGTTCAGCCTCAGCTGGCTTTTGTGTGTGTGTGTGGCAACAGGATTTTCATGTAAAGAGGAATTGGGACAAAGCCCTCAGCCAATCCTAAGATTCTGTAGTGTTGTTTTCTTATCTTGTTTGAATTATTTTGCATAACAGGATAAACTACAGTTAAAAGTGAGCACAAAGCCTTTCTTAGTCACTGGGGACACCAGTGTGAACTTTAGGTGGATTTGGAGACGAAGTAAGATAACAGGAAATATCTGGCAGAAACTGTCATGAAATTGCTGCATGGTTAGCCAGCCCTGGTGAGCTGGAGGGCGCACACTGGCTGCTCCTCTGCGAGAACAATGCAGTGGCCTGAATCCCTTCTAAACGACTTGGCTCAGAGCTATGGGGACTTGGTGCGCTGTGCAGATGGTCTGTCAGCCCTGATTGGCTGTGTCTCCCTTGCTCTACATCTGCGCCATGTTCACAGCATCACCTCCGCAGCAGTCCCCTCCTCTCCTCCCCGAGGCCGGCTCACACAGGGCTGAGGCCTGATCTTCAGATGATAGATTTTATTTCACCATCCTTCATGAAGTAAAGCTGCAGGGTGGATTGTTACTGTCCTGTTGGAACCTCTGGGGGTCATCTGGGTAGTTGCTGAAGAATAAAAACTACTTCATTTCAAACACTGCAGACCCTACTGGGTTTCTTAAATATTTTTGGCTTTTCGTGGCAGTCCCTTAGCTTGCCAATTGATCAATCCCGCCCCAGTGCTTGGGGAGGGATGTCCTTGCAGAGTGACAGAGCCAGCCTTGGGCTCCTGCAAGAGCCACTTGAGACAAGAGCCATTTGTGTCATCTGGACTCATTGCATGTGTGAACCAGCTGTGAAAAACACACCTCAGACATGTTTTCTGCCATATCTCAGTAAATTGAAGTTTTTCCTCCAAGTTTGGAAAATATTGCAGTGGTTTTTGTTATGGGGAAAAAAAGCATTTCAGCCTTTATATTCATCTCAGCCACTTATTTTTTATATTTGTGCCAATCTTTAAATGAATAGTAACTGATCCTTACAAACTGGCATTGCATAGAAGCTGAGAAAATGTTTTTGCTCTTTCTTTTGCACGATGGGTAATGCTGCAGTTTGTGTTGTCAGGTTGTGCTGTGGGGCAAGGCTAAGCTGGCACTGACCCCTCAGACCATCTTACAGATTTCCTCTTCTAGAAACTTATATTCTTAAAAAAAACATATCACTGGGCTTTAATGGCTGCCAATGTCCGGAAAGTTTACCAGACATCCATTAATGAAGCTTTAGGCCCTTACTAAGGGCAACAGCCTCAACTTTCTCAAATATGTGTCTGCCTCTCTGATTCTTCCAAGTCAGTGCGAGTCTGGAAGGGTTGTAACTGGTGGTGAGAGCTGTCAGGTATGGCGAGATCAGAGCCAGTGGACAGCCTGGGGAATTGGGATCCTCCATCCTCAGTGCTATGAAAGATGGAGCACCAGCCAGCCATTACCTGCAAGTTGGCACTCCTTTGGGATGTGGACCATTTGCAGGTTGTACTCACTTAAAAAAAAGTCAACAATTGCCAGTGAAGTCTATTGGGATCTTAACTACATTTTTTGGATGCAAAAGTGGAGATTTATAAATAGATGAAATAGCTTGTCCAAGATCATGTAAGTAAGAAAGCATTCAGGTTGGGTTTGAATCCAGGCAGTCTGACCCCAGAGCTGGCCCCTCACTCACTAGTGACACTGCCCAGCCTTGGGGGCTGGGGCTATGGGCAACAGCCTGGCCCCAGGGGGCTAGTGCAGTAAACCATCCCCATTCCTTTTTTCAGACAACTTTGTTTTAAAGGTTCTCAGTACATATATGAACTGATACCTTTCTCTGGAGTATTGCATTGATCCTCACTGTACCAGACTTTAGCTTGTTATTTTGAACTAAGGTTCACAGGAAGTTGTAAAGCTAAAACAGGTTCTGTGTACTCTTCACCTAGATTTCCCAATTGTAACTGGTAAAATGTCTGGACTTGCTTCCAGCACCTAGGGTCTGAGCTGAGAGGTGAGCCGTGCAACCCAGCACGCTCTGAGCCAGGCTTTCCATTGCAGGGGAGTTCCTGTCTCGCCCTGGGTGAGTCTGGCCTTAAAGCAGAGTCAGTCAACTGAGCTGTAGGTTTCCTC EMBV3_38373 CATCCAAAGTACAGTCTTTCTGGGCACCTTTCTGTTTCTCTGTCCATCTCTCCTTTTCTC Gene GeneID:512749|CCDC123:NM_001083675:607_cdna Constitutive 1 NULL GeneID:512749 18 GENE CCDC123 MGC157068 coiled-coil domain containing 123 EMBV3_39272 AGTCAGGTGTGCCTTACTCTTGTCTGCCTCCTTCCTTGCGATGGTCACTGAAACTTCTCT Gene BVV0101_024660 + 0 NULL GK000005.2:25936084-25939734 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17954 AGATGTCGCAGTCCCTCTGAGAGAAGGTGTCGCAGTCCCTCTGAAAGAAGGTGTCGCAGT Gene GeneID:100141098|LOC100141098:XM_002691498:431_cdna Constitutive 0 NULL GeneID:100141098 11 GENE LOC100141098 NULL hypothetical protein LOC100141098 EMBV3_43546 CCTTCACTGCCTTTCGGGTCCTCCTGGCTCTGGCTGATAAAATGATTCATTTGTAAATGA Gene GeneID:533229|ETNK2:XM_002693881:177_cdna Constitutive 0 NULL GeneID:533229 16 GENE ETNK2 NULL ethanolamine kinase 2 EMBV3_35881 GCTGTGTCAGTGTAAGAGCTGGTGTTCTGTGTCTGACTGCAAGACTAGATACTTCCCCAA Gene GeneID:281408|PLAU:NM_174147:212_cdna Constitutive 0 NULL GeneID:281408 28 GENE PLAU MGC139972 plasminogen activator, urokinase EMBV3_29600 TAGAGGCAGATCCTTTGCGGGGCGAGTCAGAAGGCACTGCAAGAGCAGGGGGAGATCAGG Variant GeneID:508320|STK19:NM_001097997:72_cdna 109^278 3 EMBV3_19542 GeneID:508320 23 GENE STK19 NULL serine/threonine kinase 19 EMBV3_04107 ATGAATCAGCCGTAGGCATGTCCCCTGCATTCTCCATGTCTGCAACTCCATTGCTGCCCT Gene BVT0101_029908 + 1 EMBV3_20396 GK000016.2:1335060-1398309 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24723 GGACTCTATTTATAGCCTGAGGGACAGACAGCCTCCTTTCAGCAGAGTTTCAAGAAATGC Gene GeneID:540826|SMURF2:XM_002696123:230_cdna Constitutive 0 NULL GeneID:540826 19 GENE SMURF2 NULL SMAD specific E3 ubiquitin protein ligase 2 EMBV3_04066 TCTAGCTGCTGGAGTAAGACCAGGTGGGAGCACTGATGCAGAAGTCAGCTTCTCTGTGGC Gene BVT0102_247073 + 1 EMBV3_14839 GK000028.2:24845869-24869415 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159254 TCONS_00160358 2 XLOC_097379 XLOC_097636 NonCoding TCONS_00160358 XLOC_097636 NonCoding NonCoding - 28:24851413-24852422 - TSS119939 1009 1 TCONS_00160358_7 85 0.777006937561943 1 0 5.3936264218584e-05 0.000179257489358532 0.000137571139049148 0 0 0.000127625067248952 1.90272396083987e-10 0.000146548210798109 0 0 0 0 0 0 0 0 0 0 0.00196151974058689 0.000206690855403576 2.10602180073642e-05 0 0 0 0 0 0 0 0 0 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 3e-45 187 80.45 0.209117938553023 0 noncoding 1 1 1 1 -0.0316331946456237 0.764176411338635 0.00552553025022674 0.92182345222906 AGGAAAGTAGAGCCACTGTATTAGGGAAGAAGAAATTTATTGTAAGGATGAGGCCTTACACAACTGGGGAAGGAGCTAGGGATGTAAAAGTCCAAAAAGGATTGTTGGAGGATGAGAGAACAGTCGTTAAGCAGCCTGGCTGGGCTGAATGAGTCAGAGCTTGCAAGGGAGTCTGGAAGCCAAGTGCCTCTAGCTGCTGGAGTAAGACCAGGTGGGAGCACTGATGCAGAAGTCAGCTTCTCTGTGGCCACCGTCTCTGAGTTCACGTGAAGCATCTGATTGTAGGCCTGAGGCTGCTCTTGGTCAGCAGATCAGGAGATCTTGCTGGCGATCAGGAGGGAGCACTTGATACACAATGAGGAAGAGCAAAGACAAGAGCGAGGTGCTGGAATCTACCGGTACCTTTGTGTCTATCTCTCACAGCCTTTGACCTACAGTGATCTTCAGAGCATGGTGGCTTCACTTCTGCCTCCCAAAGCTCATACAGATTCACTTTTGCCTAACTCAAACCCAGAATCACACAGGGAAAGGCATTATGAGAAACATAGCTTCCTGGCCAAGTTTAACACAGAACAGTCCAGCACATCCCTGAAACTGATTCTCTGGGTTCTGCATCTGCATCCATGAAAAGAAGCATCATGATTATTGATTTGTCTTCTCAAATACCTCAGTGCGAGGAAGGGAAGGACCTGGGGAAGTGAATGCAAATATTTTGTGTTTGTCATATCAGTCGTATCGGACTCTTTGTGACCACATGGACTGTAGCCTGCCAGGTTCCTCCGTCCATGGAATTTCTCGGGCAAGAATACTGCGTTGCCATTTCCTTCTCCAGGGCATCTTCCCAACCCAGCAATGGAATCTGAATCTCCTGCATCTCCTACATTGGCAGGTGGTGGATTCTTTATCACTGTGCCGCCACCTGGGAAGGCTGAATGCAAATATTTCAGTCACTGGAAAGGTGGAGCATCTCCTGAAAGTTAACACTTTAAAATATGTGTCTGTCAGTGAG TCONS_00160356 s 5' 5546 TCONS_00160356 s 5' 6554 EMBV3_33065 GAAGAAACAAAATCAGTCCTTGGCTACCTTGTGCAAGTGACAGTTAAAGCATTACAGTGC Gene BVT0102_046926 + 1 EMBV3_22482 GK000007.2:44175538-44464541 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06454 TGTATGTGGCCCCTTTTCAGGGAGTTCTTTTTGGGGTCAACATATTTACTAGCTGCTGAG Gene BVV0102_356088 + 0 NULL GK000011.2:5777409-5786451 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11624 CTGCCTCACTTAACATTCTCCTGGTAGATGGCTTTTCTGAGCCCTATCTGCAGTTTCGGG Gene GeneID:504206|PCDHB1:XM_002689225:76_cdna Constitutive 0 NULL GeneID:504206 7 GENE PCDHB1 NULL protocadherin beta 1 EMBV3_21762 GTCCGCATCGCTGAGACCTGGCTGGACTCCTTCAAAGAAACCTTCTACAAGCAGAGTCCA Gene GeneID:618078|GALNTL2:XM_002685180:45_cdna Constitutive 0 NULL GeneID:618078 1 GENE GALNTL2 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 EMBV3_23429 GAGAACGGCCATGTTTGTGACTATATTCAACACTCCTATAGGAAGTCTGTTGATGGCACT Variant GeneID:507206|MGC152111:NM_001080235:47_cdna 659^739 1 EMBV3_22458 GeneID:507206 1 GENE MGC152111 NULL hypothetical LOC507206 EMBV3_05045 CCTTGGCTCCAACGCTGAAGTCGATTTGGGGAGCAGTAACTCTTTTCTCCGCCTAGGACT Gene GeneID:100137797|LOC100137797:XM_002694779:580_cdna Constitutive 0 NULL GeneID:100137797 18 GENE LOC100137797 NULL hypothetical protein LOC100137797 EMBV3_22090 GAGAGCTTGTGGGGAGCTCAGGCCCAATCTGGAATCTCTCCTTGTTTTTGCTTTTTCTCC Gene GeneID:617489|LOC617489:NM_001076465:409_cdna UTR3_Alt 1 NULL GeneID:617489 18 GENE LOC617489 NULL hypothetical protein LOC617489 EMBV3_39051 TGAGGATCCCCTCATCACCCCTGTGCCCACTTCGGAGAACCCCTTCCGGGAGAAGAAATT Gene GeneID:281204|GNG3:NM_174073:7_cdna Constitutive 0 NULL GeneID:281204 29 GENE GNG3 MGC133912 guanine nucleotide binding protein (G protein), gamma 3 EMBV3_39397 GTGAGCACAGCATGTAGATTTCTTCCATCTTTCTTCCACCTGCACCCTCAACATCAAAGG Gene BVV0101_016693 + 1 EMBV3_37444 GK000012.2:82276356-82844294 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18055 AGAAACTGCCTCCGAGCCCTGTGGCATAAGCCCGTGGGTGCCGGCTGCCAAGTCTTCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09557 ATACTCACCCTGGTGGATGATACACTGCAGGCAGCAAGAATTATTGCCAAGTTAGCAGCT Variant GeneID:282657|ATP6V1H:NM_174704:14_cdna 481^594 2 EMBV3_03883 GeneID:282657 14 GENE ATP6V1H MGC128141 SFD ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H EMBV3_00169 CAGCGAGTGCAAGTTCAGCCTCTCACTCACAGACCTGTTTGTCATCATCTTCTCCGGGGT Gene GeneID:789209|LRRC38:XM_002694147:538_cdna Constitutive 0 NULL GeneID:789209 16 GENE LRRC38 NULL leucine rich repeat containing 38 EMBV3_26095 GTTGACCACACTGGATCATCGTCTATCGCTTGCTGAAGACAAGGGCAGGTATTCTCACCT Gene BVT0102_132428 + 0 NULL GK000024.2:59254982-59555307 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140734 1 XLOC_085198 NonCoding TCONS_00140734 XLOC_085198 NonCoding NonCoding - 24:59513382-59557175 - TSS104969 2552 2 TCONS_00140734_7 117 0.214733542319749 3 0.941793021556449 0.00514879794707019 0.00235024060799376 0.0033700260917425 0.00451472763077011 0.00169892578536525 0.000772224790977717 0.00163666932617172 0.00158489469249953 0.00206965734601255 0.000161883852392156 2.10271944438352e-07 4.71876099792723e-05 0.000375617360119047 0.00157230353541399 0.000556425624680272 0 0 0 0.0047315381055464 0.00487198483277227 0.00217483846001225 6.67368512781121e-07 0 0 0.00330479257681412 0.00332122344901206 0.00474541540306691 9.04141491664238e-07 4.59061313730176e-07 5.74790921381095e-07 XM_003587622.2 LOC100849024 PREDICTED: Bos taurus zinc finger protein 621-like (LOC100849024), 7e-27 127 69.94 0.134796238244514 0 noncoding 0 0 0 0 -1.63947249012425 0.0127682455832313 -0.236542106188659 0.00379624586101235 CAGGTGATGCCAATGGTGCCAAGCAGGAGCCCGCCGAGTTTCTAAAGCTCAGTTCAGTTTAACGTTGGCCGGGACGGGAGTGTTTCCCGGAGCAGTTCTGTCTACAAGAACAGCGTTAAGAAATTTGAAATCATCTTTGCCATCAGGCCAGTCAGGAAAAAACAAATGCAAGACTCGCCAAGCAGGATCATCAGAACTCGGTCTTCTGCCTTCAGTGAATCTTAAGCCCCAGCAGCACAGCTTCGTTACTGCCACCGAGCAGAGGGAAGTCTCTTGGGAAAGCCCCCTTTCATCACGTCCCGTACGTTTTGTTGACCACACTGGATCATCGTCTATCGCTTGCTGAAGACAAGGGCAGGTATTCTCACCTCTGGTTCTGACCCTGGCGCTGGGGGGCGCCTGCTCTGGCTCCTGGCGGCCCGTCTCTCGCTGATGGCGCGTCCTCCTCCGCCTGGTGCTTTGCGCAGTGAGACCCGGGCTGCGGTCCGCCGTCCAGAGGAAAGAAGGGCATTCTTTGGAGCTACTCTGTTTACGAAAAGCAAGATCATCCACACAAGACTCATATTCTCTGTGTGTCCAGTCCTCTTCGGGAAGACGATCTAATTCTTTGTATCTCTGAAAATGCCGTGGGATTCACCACTGTTGATTGATTACCCCTTTGTTCCAGGAAGTCAAGAGGGAAAGAGCTTCTTGGCAACATACGCGTTGGGTTTCCTTCTGATTTCTTGTGCTGTTTGTTCATTAAAGTTTCTCAGCCCCTTCTTTCCTGTCTGTACTTTAAATATGACTGGCCTGTGGGCTTCTTTGTCCTGTGACATAACTTCTGACGTTGCTCATCGACCCTGTGCGATCTCATCTGGTCGCTTGGCTACAGTCATAGCCTCAATGAATTGATGACTTCCAAATCTTGCTGTCAAGTTTTCACTCCTCTACTGAGCTCCAAATCCATATATCCAGTTATATGCTGGCTGGGCTTTGTTGTTGTTGTTGTTAGAAAGGAAAGTTGCTTTTAATCAAATGCTAGTGAACGGGGGCGATGGTGGACTCACTGCCCCCACAAAGTCGCTTCCCAGGATTCTGCTCTGGCTGAGCATTTTTATTGGTGGTCTGGTGGATTTTTCAAACTCAGATGTTCAAAGACGGAACTAATCTTTTCTCCTCCTCACACCAACCTTCCCCTAGTTGGCTTCGTTTCCTTTGTTTCTCTTTAGTCTTCTTATTTATTTGTTTTTGGCCATGCTAGGACTCTGTTGCAGCATGCAGGCTTGCTCGAGTTGTGAGGAGCTGGGGCTACTCTCCCTCAGAGTGTGCAGGCTTCCTTCTCGTGTGTGGCTTCTCTCGCTGCAGAGTACAGGCTCTAGGCAGGCAGGGCTTCGGTGGTTGTAGTGTGTGGGCTCAGTAGTGGGGCTCGAGGGCTCTAGAGCACAGGCTCAGTAGCTGTGTTACCTGGGCTCAGCTGGTCCAGGGCACAAGGGCTCCTCCCAGACCAGGGATCTTACCCGCGTTCCTGCATTGGCAGGCAGACTCTTATCCACGGAACTACTAGGGGAGTCCCTCCTTTCCTTTACTTGTGAACCTCAAATCTACCTGTCTGTGCAGGTCTTCTTTTTCATCTTTCAGGTCTAATCCGCGCCCCCCCCCCACCGCCCGTGTCCTCACTGTGCCTCCTGGATATTTCTGTAACCACCCTCTTTCTATCTATTCCTCTGACACTGCCTACGTTCAGCCATTCCTCACGTTTTGTCTTGACTGTTCATTGCCGATTCCTCTTAAAAGACTTCAAGCTGCCGACATCCTCCCTTCCGACCACATTCTTCCCTGCTGTAGCCCAAAGGCAAACTAACTGTTCAGTTCAGTTGAAACTCATGTCCGATTAATAGGTTTCCCATCTTTAAAATTCTCACACAGCATCCCATAACCTTCAAGATAAAAATCCAAACTCTTGGCAGGTTAGCATGAGACCTTCAGGGGGGTTACCTTTTTCTGGTTCCAGAACCCCCTTAAGTCTCTGAGGAGAGCTGTGGAAACTTTCTGCTGGCTTGTACCTCTAATGTTATATGCTGATTTTCTGTGCACGGGCCTCTTTTTACATTTTTTTTGTAAGAACTTTGAAGACATGGTTTAATCCTCTGCAGCTGCAGTACATAATACGTCTGATACATAATAATCATTTAAAAAGTGTTTGCGGAATTACTAATAATGTCTTTCTTCTTCTGATGTCTGTGTTTTGGGCCAATATAGTATGTGATCTTAATATATGGGTTACTTTAGAGACCATATCTGTATCTGTACTTCAGTGGTACCCCATTGTGACCATACAGTGGGGGTCTCAGGATCTATTTCCTTTCAGTGAAAGTGTTCCTCTGACGGGATTGCCTCCTGACCTCAGTACCCAGAGTTTCCAAAACTGAATAATAATTACAAGTCATTTGCATACACTAAGTATATGCCAATCCCAGTTCTTTCTTGATAATGCTGCATAAAAGGGAGCAAGTTTGCCTCCATCCCAGTTCTTTTTTTTTTAAGATATTGAAGTGTGAAAGCACCGTAGG TCONS_00140740 TCONS_00140741 s 3' 154449 TCONS_00140740 TCONS_00140741 s 3' 112946 EMBV3_22924 GGGGAGGCAGTGGGGACAGTCCAGCTGGTCAGACTGCGCTCCCAGTGCCGAGGGCCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17377 CATCAAGTATGGCGAACTCATCGTTCTGGGCTACAATGGGTGTCTGGCAAGTGGGGACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15717 CACAGAAGTGGGTTCCCCAGAACAGTTTGTGCCTCTGTTGTGGCTTTTATTACTTGCTCC Gene BVV0102_153537 + 1 EMBV3_23622 GK000009.2:45455660-45484428 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25211 GGGGCCCACTTCGTCCCATCGCTCAACATCAACACTTGATGCCGATTCTTTCGATATTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08020 GACGGGTTTGCCGATTGAGGGTAGTGAATCCAGGGGCTTTGGGACTCTGCAGTATGTTTT Gene BVV0101_005501 + 0 NULL GK000025.2:1562567-1568022 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145881 TCONS_00145883 TCONS_00145880 TCONS_00144165 TCONS_00145879 TCONS_00145882 TCONS_00145884 2 XLOC_088962 XLOC_088480 Coding TCONS_00145884 XLOC_088962 Coding Coding LOC505086 25:1551681-1564117 j TSS109216 4226 1 TCONS_00145884_6 523 0.083530525319451 12 0.661117812625653 0.000290199895437256 0.000919533856912671 0.00101990420689412 1.52566974278644e-12 0.00114799701690345 0.000373941238234672 0.000423983578251498 0.00040310309884594 0.00113410188844515 0.000169768496733154 4.13296672895404e-05 0.000112977042115941 0.000131518102726166 0.000861836564151557 0.000154000517761208 0.000475767323520778 1.7497895658231e-16 5.91304447123194e-05 0.000499769465543242 0.00128239785906814 8.63652671227836e-55 0.000241619853482022 1.72267984149727e-05 2.57391327214833e-05 0.000122196742947814 0.000376037619830607 0.000695129137760664 1.2568500747721e-05 1.36174071949924e-45 2.89656596922514e-05 XM_005224618.1 ZNF598 PREDICTED: Bos taurus zinc finger protein 598 (ZNF598), transcript 0.0 2893 100.00 0.379318504495977 NM_178167.3 ZNF598 Homo sapiens zinc finger protein 598 (ZNF598), mRNA. 0.0 1804 84.88 0.380501656412683 TCONS_00145884_6 sp|Q80YR4|ZN598_MOUSE ZN598_MOUSE Zinc finger protein 598; 0.0 876 84.86 0.957934990439771 0 coding 0 0 0 0 0.0364614099907631 0.872763328385121 -0.157436648601597 0.183621883808702 CTCAATGCTGGTCCCCTCTTCTTCTTTGTGCTCATGAAAAGTCTTTTATTCCTTTGCTGTCCTTTTAGTGGGATTTTTTGAGGGTGAGATGACACCTGCCCATGGCCAATCCACCAGGTTTAATTGGTATGATGATCCTTGTTTTGCAAACAAGGAAGCTAAAGGCTCAACAAGTTGACCAAGGTCACCAGCAAATACGTAGTTGGAGTTTCCAGCCCATTTCTGCTTCTACAGTCCAAGCTCATCCTCCCACAACACACTGCCTCTTTTCTGGAAGGGTTCAGATCTGAACCAACCTCCCTTAACAGCAGAAGAGAGGTCCTGAGTGTGCCTGAGGAGGCCCAAAACATACTGCAGAGTCCCAAAGCCCCTGGATTCACTACCCTCAATCAGCAAACCCGTCCTGCTATTTCTCTGCCTCAAGCCCCCAGGCTCAGCTGGGTGAGGTCAACTTGCCCATGAAGAGGTCACGTTCTCTACCTGCCTTTTCTAGTGGGACTGGGGATGTCCACCCCTGGCTCAGAGACAGATGTCACCATATGTTGTCTTTTCCGATAGGGATTGTGTTTGTGTGTGCGCACACGTGTGCCCGATGACCAGGCCCCTGTTTGTCCCAAATACAACATAAGATCTGGGTTGGAGAGAGATTTGGGTTCCTAGTAAGGTCACAGTATTTAGCAAATAAAAATATAGGGCTGTCGGTTGAACTTGAATTTCAGAGGAACCATGAATAGCATTTTAGTATTAAGTATTGAAGAGAGAATTCATAGGGCCTGGACTCCATCTTAGGCCTGTTCATGCTGATCATGCTTGGCCACCTCTCCAATGGACTCTGAACTCTGTGTTTAGTGCCTGTGGAAACGACAACAGAAGGATAAGACCCCCTCTGGACAGGCCATAAATTTTTCCTTAGCTATTGGAGTGTAACCTTGGGCTTATTGATTATTGGCCAATTGTTTAACTGCTTGAGCACATAACACGTGAATGATGGGGTTATTGGGATTATATTTACCCTTCCTTTGTTTATATAAGTCTCAAGGAATTTGGAGTGGTGGGTTCAGACAAGAACATATGGGATATAAAGATTTTCACAAATGCTGGTCCGGGTCCTTGGCTAAGAGGAGACTCTGCGTTGGGCCTTCCGGTGTAATAAACTGCACTTCACTATCTGCATTGTCCTTCTGAGTAAATTTGTTTCCCGGAACGCGTGGCTACAACAGTATGATCCATCAATATTTGGGTCATACAATTGCTCCCAGAAGAGAGGGCGGGCCCAGGACAGAGGCCTAGGCGGAGAGAAGCCGGATGTTCGCAGCCTGGCGCGGGGACGGCGGCGGGCCTCCAAAGCGGTCGCCTCCACCTAGAGCGCCCCGGGCGAAGTCGCCGCTCTAGCCCGCACCTCGCTGAGGCGGAAGTCGCGCACGCACTTCCGCCGGGCGGGCCCGTTGCTGGGCGGGGCGGTGACGTCGCCCCCGGAAGGGGCGGGCCCGCCGGGAGCCAGGCCGTGCGGTGCGGTGCCGCGCCGGCCGGGAGCGGGCCGGAGCCCGGACCATGGCGGCGGCTGCGGCGGCGGGCCCGGAGGGGCGACTCGTGTCCCAGGAGGCGGCGGCGGCGGCACCCGAGCGGGGCGGCGGGAGTTGCGTACTGTGCTGCGGGGACCTGGAGGCCACGGCGCTGGGCCGCTGCGACCACCCGGTGTGCTACCGCTGCTCCACCAAGATGCGGGTGCTGTGCGAGCAGCGGTACTGCGCCGTGTGCCGCGAGGAGCTGCGCCAGGTGGTCTTCGGGAAGACACTCCCTGCCTTTGCCACCATCCCTCTGCACCAGCTGCAGCACGAGAAGAAATATGACATCTACTTCATGGACGGGAGAGTGTTTGCCCTCTACAGGCAGCTGCTGCAGCACGAGTGCCCCCGCTGTCCTGAGCGGCCGCCCTTCAGCCTCTTTGGGGACCTGGAGCAGCACATGCGGAAGCAGCACGAGCTGTTCTGCTGCAAGCTGTGCCTCAGGCACCTGCAGATCTTCACACACGAGCGGAAGTGGTACTCACGCAAGGACCTGGCTCGGCACCGCATGCAGGGGGACCCCGACGACACTTCACACCGCGGACACCCCCTCTGCAAGTTCTGTGACGAGCGCTACCTGGACAACGACGAGCTGCTCAAGCACCTGCGTCGTGACCACTACTTCTGCCACTTCTGCGACGCGGATGGGGCCCAGGACTACTACAGTGACTATGCGTATCTGCGTGAGCACTTCCGCGAGAAGCACTTCCTGTGTGAGGAGGGCCGCTGCAGCACCGAGCAGTTCACGCACGCCTTCCGCACGGAAATCGACCTGAAGGCCCACAGGACGGCCTGCCACAGCCGCAGCCGCGCCGAGGCCCGCCAGAACCGCCAGATCGACCTGCAGTTCAGCTATGCACCGCGGCACTCGCGCCGGAGCGAGGGGGTCATCGGCGGTGAGGACTACGAGGAGCTGGACAGGTACAACCGCCAGGGCCGCACAGGCCGGGCCAGCGGCCGCGGAGCCCAGCAAAGCCGCCGAGGAAGCTGGAGGTACAAGAGGGAAGAAGAGGACCGAGAAGTGGCAGCTGCCATCCGGGCCTCGGTGGCCACCCAGCAGCAGCAGCAGCAGCAGGAGACGCGCAGGAGTGAGGACTGGGAAGAGGGTGGCAGGCCCAAGAAGGAGGAGGCGGGGCTGCGGGGTCCTGAGGAGGCCCGCGGCCCCCGGCGCCCAGCCCGGACTCCGGGCGAGGGCCCAGGTCCCAAGGAAGCCTCCACCAATGGTCCTGTGAGCCAGGAGGCCTTTTCCATCACTGGCCCAGCTGCAGGAGCCACACTCCCAAACACTCTCCCGCCCCCCACTTCGAAGCTCAAGGATGAAGACTTCCCCAGTCTCTGTGCCTCCTCTTCGTCCTCGAGCTCCGTGGCAGCCGCCCCAGGCCCTGTGGGGCTGGCGCTGGCTTACCCTGTGCCCGCCAGGGGCAGGACCACCTTTCAGGAGGAAGACTTCCCTGCCCTGGTGCCCTCTGCCTCCAAGCCCAGCAGTGCCCCCACCAGCCTCATCTCTGCCTGGAACAGTGGGGCCAGCAAGAAGGCTTCAATGCCGTGGTGCTCCTAAAGGGCACCCCGCCTCCGCCAGGCCTGGCGCCCCCTGTCAGCAAGCCACCCCCCGGCTTCTCCGGCCTTCCGTCTAGCCCCCACCCGGCCTGTGTCCCCAGCACTACGACCACCACGAAAGCGTAAGTGTGGGCGGGCCCCTGGCCCCATGCCCCCAGGGGAGAGTGCCCTCACCTTGGGCCTCCCCAAAGGCGGAAGCCTCCACCTCCTTCCGATTCAGACCCAGGCCAACGCCTGTGCCCCGGGCCTACTTGGTCCCTGAGAACTTCCGAGAGAGGAACCTGCAGCTCATCCAGTCCATCAGGGACTTCCTGCAGAGCGATGACGCCCGCTTCAGCAAGTTCAAGAGCTACTCGGGGGAGTTCAGACAGGGCGCGATCTCTGCAGCCCAGTATTATAAGAGTTGCCGGGACCTGCTGGGGGAGAACTTCGAGAAGATCTTCAACGAGTTGCTGGTGCTGCTGCCTGATACGGCCAAGCAGCAGGAGCTGCTGTTGGCCCACACGGACTTCCGGGGCCGCGAGAAGCCTCCCGGCACAAAGGCCAAGAAGAACAGGAAGAGCGCGTGGCAGGCCAGCACCCGGCAGGCAGACAGTGAGGCCACCTGCTCAGGCCCCTCAGCTGGCCGGCTCTCCGGGGATCACCGGGAAGGCCCGCCACGACTTGCCGGCACACCCTCTTGGGGGATCCCTCTGGAGGCCTCCTGGAAACTAGAGAGACCCCTGCCACAGCAGCAGGCTGCTCTGGGTTTACGTTCTCAGGCCCTGGAGGGCGCCGGGGAGGGAAGGGGCAGGTGCCGGGACCTGTGTGCACTGTCAGGGCTGGTGGCCACGGTGGCCCCTTCCCGGAGCCCCTGAGCCCAAGGGCCGCAGCACTGCGGTCCCTGAGCTGGGCCCACGGGTGCTGGAGTCAGATGTTGAGCGTGTTGTGTAAACACTTGGCTGTTTGGTGACTAAAGAACGTTCAGGATTAAAAGACACAAAATTGTGCTACTTGAAGTTGAATCTTTTTATGAGACTAGCTGAATCTGGGATCTCCAATTGCCTCTGAACTTTTATAAGACAGTTTATCTTCAAATAAATTTATTTTGCAATAATGCACATA EMBV3_02023 AGGGGAGTTTTCATTGTGAGTGTAAGGCTAACTGCCCATGACTTCATGTGCAGTGCTATT Gene GeneID:286876|CFDP2:NM_174800:67_cdna Constitutive 2 NULL GeneID:286876 18 GENE CFDP2 MGC128687 bcnt p97 craniofacial development protein 2 EMBV3_19269 TTTGCTGTGTGACTCAGGGAACTCGAATGGGGCTCTGTAACAACCTACAGGGCTGTAATG Gene BVT0102_000519 + 0 NULL GK000021.2:2410194-2492574 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00753 GTCACCCAACAAAATAAGCAGCATTAAAGACAGTACTGGCCCCTGTCATATCTTCACTAC Gene BVT0101_008713 - 0 NULL GK000020.2:13826180-13856100 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114605 TCONS_00113318 TCONS_00114603 TCONS_00114606 TCONS_00114602 TCONS_00113317 TCONS_00114607 TCONS_00113319 TCONS_00113320 TCONS_00114604 TCONS_00114601 2 XLOC_069316 XLOC_069011 Coding TCONS_00114603 XLOC_069316 Coding Coding C20H5orf44 20:13851714-13891318 j TSS85438 5862 1 TCONS_00114603_1 244 0.14977823268509 11 0.852258667272681 0.000268911119455363 0.00020956365882735 9.33271988443827e-05 3.1767772611963e-10 2.01616968321893e-16 0.000113776991795227 0.000113019578316245 1.51737629823633e-17 6.64023808190961e-06 5.20430800052716e-05 3.81507939107e-05 6.50264238217465e-05 6.90332895441834e-24 8.64480537541631e-05 6.4996749334003e-06 0.000147959627717622 0.000494216140330823 0.000332096080127161 0.000323821210894989 0.000579879949687566 1.57314235587619e-12 9.68694745090847e-05 8.4852330157902e-06 0.000135405581692976 0.000169171135272834 0.000144290677306469 0.000213899649751008 3.38456025907091e-06 2.56378743107744e-17 0.000320879520636268 XM_005221482.1 SGTB PREDICTED: Bos taurus small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta (SGTB), transcript variant X2, mRNA. 0.0 5726 100.00 0.541453428863869 NM_001093756.1 TRAPPC13 Homo sapiens trafficking protein particle complex 13 (TRAPPC13), 0.0 1164 86.71 0.164790174002047 TCONS_00114603_1 sp|A7MB76|TPC13_BOVIN CE044_BOVIN UPF0533 protein C5orf44 homolog; 1e-162 462 97.41 0.922131147540984 1 coding 0 0 0 0 0.106736039201629 0.402016400925659 -0.0103474660640801 0.840982726967264 ATTGTCTCCGAGGAGTGATTTCTTGAAGTCGCGGTTTGTGATTGTGGCTGGAAAATAGAGAAGTATTTTATGTATAAGTCGCTAAGAGGCAAGAGATGGCTTTGGTAAAAAGAAGCCATTGAGTCGCTAAAGGACGTGGTAAGAAGAGAATTTAAGGTACCACCGGCAGAGAACAAACGATTGGGAATGTGATGCCCTGTCTTCCGGAACGTGCGCTTTCTGTTTTCTTCCGAGCTAAGTGAACCTCTTCAGCCTCCGTAGGCAGTGGGTTCAAAGTGCCGGTCAAAATGGAGGTGAATCCCCCCAAGCAGGAGCACCTGCTGGCCCTGAAAGTAATGCGGTTGACCAAACCTACTTTATTCACCAATATTCCAGTAACATGTGAAGAGAAAGACTTACCTGGAGATCTCTTTAACCAACTTATGAGAGATGATCCTTCAACTGTAAATGGTGCAGAAATTTTAATGTTGGGAGAAATGTTGACCTTACCACAGAATTTTGGGAATATATTTTTGGGAGAGACCTTTTCCAGTTATATCAGTGTCCATAATGATAGCAATCAAGTTGTAAAAGATATATTGGTTAAAGCTGATCTTCAGACAAGTTCTCAGCGTTTGAATCTTTCAGCCTCTAATGCTGCAGTGGCTGAACTTAAACCCGATTGTTGTATTGATGATGTCATACACCATGAAGTAAAGGAAATTGGAACACACATCTTGGTGTGTGCAGTGAGTTACACGACTCAGAGTGGAGAAAAAATGTATTTTAGAAAATTCTTCAAGTTTCAGGTTCTCAAACCATTGGATGTGAAAACCAAATTTTACAATGCAGAGACTGATGAAGTATTTCTTGAAGCCCAGATTCAGAATATTACAACCTCACCTATGTTTATGGAGAAAGTTTCATTGGAGCCATCTATAATGTACAATGTAGCAGAATTAAATTCAGTCAACCAAGCTGGAGAATGGCTCCAGGTTATGGAGATGTTAGGTTGTCTTTGGAGGCAATCCCAGATACTGTAAACCTTGAAGAACCTTTTCATATTACTTGTAAAATAACAAACTGCAGTGAAAGAACAATGGATCTTGTTTTGGAAATGTGCAATACCAATTCTATCCACTGGTGTGGCATTTCAGGAAGACAACTTGGAAAGCTCCATCCAAGTTCCTCTCTCTGCCTTGCCCTCACACTACTGTCTTCAGTACAAGGACTGCAAAGCGTCTCCGGCTTAAGACTAACAGACACATTCTTAAAGAGAACATATGAATACGATGACATCGCACAAGTCTGTGTGGTATCTTCGGCCATTAAAGTGGAAAGTTGAAGAAAATGTCCAGTGTTACACTTTTCATTGAGTTGCCCAGAATTTTCTGTATTTTTGTCACCTTTGTAAAATGATCAACAGTAAAAATAAGTATGTTATTTAAATTTCTTTCCTATAAAAGTTAAAATATTAAATATTTGTTTTGAAAAGAACCATCTACTGATTTTATCTTGTGAGTTATATTCCAAATGAACATTTGTATATTTTCTGCACATGTGATTTTGTTTCACCTTAAATGACGATTGGACTTTATTCCCCAAAAGCTCTACATTTGAGGCCATGTGTCCCTAGCAGGTATCTTGAACAATGGTCAGTAAACTTTTCATGTAAAGGGCCAGGTATTGCATATGTTAGACCTTGCAGGCCCCGAGGTTTCTGCTGAAACTACTCTGCGGTTGTAATACAAAAGCAGCCAGTAGGCTCTAGTGACTCAGACAGTAAAGAATCTGCCTGCAGTGGAGGCGACCCAGGTTCAATCCCTGGGCAGGCAGATCCCCTGGAGAAGGGAATGGCTACCCACTCCCGTATTCTTTCCTGGAGAATTCAGTGGACAGAGGGGCCTGGTAGGCTATAGTCCATGGGGTTGCAAAGGGTCAGAAACAACCGAGCGACTTTCACTTTAGGCAAAAATTGTACCACAGCATTTGCAAAAACAAGCAGCCGGCTGGACTTGACCTGCAGGCCACAGTTTGCTGACCTCAATCTAGAAGATACAGTTGTTTTTTAAAACTTTAGAATTCTCATCTTACTTTATTTAGGAGTATTTTCGTTAACACCAGCTTTTTCCTCAGTCAACAAAAAAAATTTAAAACAACTGCAGTGGTCCTCATATAATCTTGTATTTGCTAACGGTATGAATTTTTCTAGTTTTCAAAATTATCATATTGACATCTGCATTTTTGTGTGCATACAAACAGAAATGTTTAACTTTCAGTTACTAAAAGCAGATAAGAATTGGTTTTATTTCTTAAACTGTCAATTACTCAGATAACTCTAAGCTAAGAAGCCTGATCATTTTCTAATTCTAAGCCAAGAAAGTCCTGTTTTTTCCCATTGAAAAATAAACCACTTTTTTTTTAAGGCATACTTAAAGGATTTCCAGCTTCTGATACTTGATTTTGAACTCTACATCATGTATTATTATTACAAAACTGTTTCTGCATGTAATCACATTAATTTACTTACGTCATATACAAAACAGTGAGGAAATTAAGACTATAAACAACTTTGCAACATGGATGTAATAAAAGTTTCAATACTTTGAAACAAAAACTAATGCTGTTAAATAAAAACTTAAGTTGAAATTCAAGCGTGTGTATATAACTGCTTAAATGTAAATGCATTAAGTCAAATACAAAAATTGTTTTTTCTTAAATGCATAATTATTTATTGCCATGACAAATTGTTTGGTCCAAAATGAAAGCTGTATTCTGAATGAGATTTGCCCTTAAATTGAAGAGGTAATTAATGAAACGTCCGTGCAAAATAAAGTGCAAGCAGTGTAAAATTGTCTTTGTCCAAAGACAGTCTTTTCTCCAAAATGAGTACAATTGATTAAATGATGAAATAAGACTTTATAGCCCTGCACTGGATACTTCAGTAGCTTTCAAGGTGTCTTCTCATGACTGAACCTTCTGTTTCACTCCATTCAAATTTTAAAAGTGACATGATGGTCACTTGGGATTCTGCTATATAATTTGACTTAGTTACAAAGCCTCCCTTTTTTATAAGCAATAACCTAGACACATATTGTTCCTTCGTTAAGTAAAGGTTACATAATGTCATCTTAGAAAGGATCTGTTTAAACCATATTATAAAAATTAGATAACCAATTTGGTACATTAAGTAGAAATGTCATTTGCATACAAAGGACATTGTAAATTTTACATTTACAATGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAAAAGGCGAAGGGGGCAGCAAAGGATGAGATGGTTAGATAGCATCACCAACTCAATGGACATGAAGTTGAGCAAACTCCAGGAGACAGTGAAGGACAGAGGAACCTGGCGTGTTACAGTCCATGGGTTCACAAAGAGTCAGACACAACTTAGCGAATGAACAACAATAAAAAATTTTACATAGCATCATAACAGTTACAGCTACTATAATGAAAAGTGGTTAATGGAAACCAATCATTCCTAAGTAGAATGTATATAAAGATTTACTTTAACGCCCTCTTGTTTCAGACAAGCAAAATAACATTTGGAGCATTCTTTATAATTTTAAGAGTAGCTAACACAATACAGCTACACAAAACCTTCTTGAAATAGCGTGCAATGGAGTAATTTCAAAGTGATGAAAGTACTTAAAAAGCAAAAGTGGCTTGAATAGAATGGAAATCCAGGTAAGTGGATAGATTATCTAGATGTGTTATGGGAGATACATTAGAAAAGAAACAAACTAGAAAAATGAAATGGAAGAAATACACCAATCCACATTACTTCATGTAAAAAGAACGGCTACTTTAACTACAGATATTAGTAAAGACATTGTTTTAAAGTATTTTTGCTTATAATGTCTTTGATTTTGGTATCAAAGTTGGCAAAATAAAATGAAGTTGGGAAGTGTTTCCTCTTCTGCTGGAAGAAATTGTGTAGATTTAATATTAAGTGTTTGGTAGAATTCACCATTGAAATTGGGCCTGTGGTTTTCTTTTCTGGAGGTACCTTATTTCTTCAGTGAGTTATGGTAGTTTGTATCTTATAAAGAATTTATCTGTTTCATGGATATGGACCTACAGTTGATCACAGTATTTTCTAATTATCTTTTTAATGTCTACATGGTCTGCAGTGATATCCCTTCTTTCGCTTCTGATACTGTTGATTAATATTCTATTTCCCTACTCAGAGGCTTACCAGTTTTACCAATTTGAAAGCATCTGTAATGCATTCAAGATAATTATGCTAGGAACCTTTTCTTATGCAACACCAGCAAGAATTGACTTTTTTTTTTTTTTTTTTTTCCCTCGCCGTAGGCTGGTAGAATCTTTGGAAGTATGGCGTCTTAACCACTAGATCACCACCCAAGTTGATTTAAGTGCAATATAGGAGACAATTCAGAAGGCTTATCTTAGACTTAAGTCCTACTTTTCTCTGGAAAAGAACTGTAGGTTCATGTAGCTCTTCCTTGTATCCTGAGCCCAGGCATTTTAGATATTTGCTGACCTAAAAGAGGAGAAATCTCTAACCTAGTGTTGCTTTTAAATTGAGCCCTTGGGACCTACATCAGAACCACTTGGTGTGCTGTGTGGAATGGTGATTCCCAGACCTTATTACAGGACCTGATAAAGTTGAAAAGTATGCCCCTGAATCTGGATTTTTAACAAATTCCAAGGTGAAATTATTCATTATAGTGAAACGAACTGTTCTAATCCAACAAAGGGAAAGAAGGGAAAGTTGGTTTTTAAATTTTAAAATACCAAATAGCCTTTTGAGATAAAGAGTTATAGTAATACAAAATTAAATCAGTCATCAGTATTACTGATTTAATTTTGTATTACTGTTTCAGTTTTCTTTCACAACACTTGTGAAATTCATTATGTGTCCACCAGCTTTACCAATTTTATAATTAACAAACCCAAGAAATTCCAGCTGGAATTAGAACAGTCTCATCCATCACTCTAGTTAAAGCCATTCCAACACTTAATGCCACTTCTCTTCACTAACTAATATGTATTCTAATTTCAGTACAATATTTCAAGTCCCCTGTTTAAGCTGCATCAAATTAAGAAGCATAAAAGTGACATGCCAAGCCAAATTATAGCAGAGGATGAACATGAACAAGAAGTGTTAATAACAGATACTTTTTGTAACCCATCAAATAATTACGAGTTTAAAAAATCAGTGTCTGCAGGCACATAATTAAATGCCACTTAGGAAATCCTTAAGGGCCAAGCTATTGGCTTATTTAAATGTAGATATATTTGAAAGTTTCCATGGTAACGTCACTAGAGAAATTGTGCTAGTGAAATTGAATAGTTATACAACTGACCTAACCAATATTATTAAGGATTTCTAAATGTATTTTATTATGTACTTAGCATAAGTGGCCATGCTAATGTTACCTATACCAAACTGTAGGCAAGATTAGTTAAGACCTATGCAAAAAACCTGAGCACCCTACATTCACTTTCTATACATTCACAGCATCTATCTTTTTCTTTTCTAAACAACACCGAATACTGCTTTCCACCAGCTCTTAAGATTTTTGTCACCCAACAAAATAAGCAGCATTAAAGACAGTACTGGCCCCTGTCATATCTTCACTACTGATAGCACTATCAAAGCTAAACCCAAAAACGAATTTCTTCTCTCCAAAGATGCTACTCAGTGGCAAGTATATTTCTCCTAAATCAGCATGAGAATCCTTTCCTCTTAGTTATCTCCCCTTTCAAAAAAGTTTGCTTATGGGAATTTGGTGCTAGAGAACTCACCAGTAAACAGCCCTACTGTTCAATAAATATACTCTGCTATTAAGTCTAGTATACAAATACAATGAAGATTTGAAA EMBV3_02832 AGCCTCAAGCCCTGATTGGGCAACACCAACTGGTCCCTCGCTTCGACGACATTAACATAA Gene BVV0102_023766 + 0 NULL GK000004.2:79758773-79986253 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04433 CATCCCCTGATCCAGCAAAGATGGTGGGGACAAAGGCTAAGCTTCTCTTCAGAACGGTCT Gene GeneID:540924|CRTAP:XM_002696912:417_cdna Constitutive 0 NULL GeneID:540924 22 GENE CRTAP NULL cartilage associated protein EMBV3_38334 CAAGACTAGTTAGTGTAGGGACAGCCAGCCGTTTAGAGGGCATCACTATATACACCATCT Gene BVT0102_062109 + 0 NULL GK000002.2:116516544-116619941 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103472 TCONS_00103475 TCONS_00103470 TCONS_00103476 TCONS_00103469 TCONS_00103471 TCONS_00103474 1 XLOC_062120 Coding TCONS_00103474 XLOC_062120 Coding Coding AGFG1 2:116441986-116523755 j TSS76826 9672 1 TCONS_00103474_5 531 0.107733664185277 12 0.881860874669797 4.26163137455449e-53 7.71679547290953e-69 1.81186393779793e-27 7.52405858021583e-17 1.7617372793009e-05 1.39811344847574e-20 1.51292588250639e-21 2.34663263165768e-18 1.5128023433435e-21 2.74931610771703e-16 4.00326041954471e-06 8.98556909803174e-13 3.88624031243877e-12 5.95157375466389e-61 8.06666441011134e-06 0.00128951045367035 3.81152631028621e-05 0.00419711422115555 1.43700241941565e-18 2.49568840796615e-97 1.79696737104304e-115 0.000455030851682881 0.000501983347136454 0.00178604212328862 2.55415328616792e-37 2.49712605298457e-35 2.52733782297855e-06 3.2802121520909e-05 9.26355846293253e-06 0.000329987429008102 XM_005202960.1 AGFG1 PREDICTED: Bos taurus ArfGAP with FG repeats 1 (AGFG1), transcript 0.0 3319 100.00 0.190136476426799 XM_005246516.1 AGFG1 PREDICTED: Homo sapiens ArfGAP with FG repeats 1 (AGFG1), 0.0 2964 85.11 0.270264681555004 TCONS_00103474_5 sp|Q2TA45|AGFG1_BOVIN AGFG1_BOVIN Arf-GAP domain and FG repeat-containing protein 1; 0.0 991 94.48 0.998116760828625 1 coding 0 0 0 0 -2.25689697347856 0.0312243260601969 0.0131817524849619 0.787276058293002 GTCCCACGACCGTCGGGCCGGTTCGCGTGGCCCGTCAGCCCTCGCTCCGCAGCGTGTCCGCCTCGCGCTCAGCCCGGTCGAGTCGAGCCGCAGCGGCCCGGGTCCGGCGCAGGCGGCGCGCGCTGACGGAGGGCGGCGGCCGCGGCCAGGGCGGCCGGTGGGACCGCAGGGTCCCCGGCGCAGCGCCGCCCGGCTCCCGGCCCTGCCGGCCTCCTCGCTCGGCGCCGCGGCCATGGCGGCCAGCGCGAAGCGGAAGCAGGAGGAGAAGCACTTGAAGATGCTGCGGGACATGACCGGCCTCCCGCACAACCGAAAGTGCTTCGACTGCGACCAGCGCGGCCCCACCTACGTGAACATGACGGTCGGCTCCTTCGTCTGTACCTCCTGCTCCGGCAGTCTGCGAGGGTTAAATCCACCACACAGGGTGAAATCCATCTCCATGACAACATTCACACAACAGGAAATTGAATTCCTTCAAAAACATGGAAATGAAGTCTGTAAACAGATTTGGCTAGGATTATTTGATGATAGATCTTCAGCAATTCCAGACTTCAGGGATCCACAAAAAGTGAAAGAGTTCCTACAAGAAAAATATGAAAAGAAAAGATGGTATGTCCCACCAGAACAAGCCAAAGTGGTGGCGTCAGTCCATGCATCTATTTCAGGGTCCTCTGCCAGTAGCACGAGCAGCACACCTGAGGTCAAACCACTGAAATCTCTTTTAGGAGATTCAGCACCAGCACTGCACTTAAATAAGGGCACACCTAGTCAGTCCCCTGTTGTAGGACGCTCCCAAGCGCAGCAGCAGGAAAAGAAGCAGTTTGACCTTTTAAGTGATCTTGGCTCAGACATCTTTGCTGCTCCAGCACCTCAGTCAACAGCGACAGCCAATTTTGCTAACTTTGCACATTTCAACAGTCACGCAGCTCAGAATTCTGCAAATGCAGATTTTGCAAACTTTGATGCATTTGGACAGTCTAGTGGTTCGAGTAATTTTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTTCAGCCCCAAACTACAGGTGGAAGTGCTGGATCAGTAAATGCTAATTTTGCTCATTTTGATAACTTCCCCAAATCCTCCAGTGCTGATTTTGGAACCTTCAATACTTCCCAGAGTCATCAAACAGCTTCAGCTGTTAGTAAAGTTTCAGCAAACAAAGCTGGTCTACAGACTACAGACAAATATGCGGCACTTGCTAATTTAGACAATATCTTCAGTGCTGGGCAAGGTGGTGATCAGGGTAGTGGGTTTGGGACCACAGGTAAAGCTCCTGTTGGTTCTGTGGTTTCAGTTCCCAGTCAGTCAAGTGCATCTTCAGACAAGTATGCAGCCCTGGCAGAACTGGACAGTGTTTTCAGCTCTGCTGCCACCTCCAGTAACGCATATACTTCCACAAGTAATGCTAGCAGTAATGTTTTTGGAACAGTGCCAGTGGGTGCTTCTGCACAGACACAGCCTGCGTCTTCAAGTGTGCCTGCTCCATTTGGAGCGGCGACCTTTGGCACTGCATCCATGAGCATGCCTGCGGGCTTCGGGACTCCCGCTCCCTATAGTCTTCCCACCAGCTTTAGTGGCAGCTTCCAGCAGCCAGCCTTCCCAGCCCAAGCAGCTTTTCCTCAACAGACAGCTTTTTCTCAACAGCCCAATGGTGCAGGTTTTGCAGCATTTGGACAAACAAAGCCAGTGGTAACCCCTTTTGGTCAAGTTGGAGCTGCTGGAGTGTCTAGTAATCCTTTTATGACTGGTGCACCAACAGGACAATTTCCAACAGGAAGCTCATCAACCAATCCTTTCTTATAGCCTTATATAGACACTTTACTGGAACGAACTTTTACATGGTCACATTACATCTCTCCGCCTCTTGCACTGTTGTCTTGTTTCACTGATCTTAGCTTTAAACACAAGAGAAGTCTTTAAAAAGCCTGCATTGTGTATTAAACACCAGGTAATATGTGCGAAACAGAGGGCTCCAGTAACAACTTTTAACCTGTGAATTGGCAAAAAAAAAAAAAGTAGCGGTATCATGTATATTAAAAATTGGCTAATATTAAGTTATTGCAGATACCACATTCATTATGCTGCAGTACTGTACATATTTTTCTTAGAAATTAGCTATTTGTGCATATCAGTATTTGTAACTTTAACACATTGTTATGTGAGAAATGTTACTGGGGAAATAGATCAGCCACTTTTAAGGTGCTGTCTTAAATTGGGAAATGAATGACCTAAAATCACTTTAACCATTGCTACTGGAAAGTTACAAAGTCAAAATTGGAAGGTTTTAGTCATTCTTGAATTTTTCCTTTCTGAAGAGCTCTTCTGTTTATACATGCCTAAATTCTTTAAAAATGTAGAGGGATACCTGTCTGCATAATAAAGCTGATCATGTTTTGCAACAGTTTGCAGGTGAAAAAAATAAATACTAGAAAATATGCTATTGTTTTGTGTTCTTGCTGCAATGCCTTTACCAAAGTGGCCTTAAATATCAGTAGTGAATTGAGAACATCTTGAATTCTTAAATTAGAGTTTCAGAAGACTTCTAGTGACTAACTTTTATGTCTAAAAGCAAATTTTATAAAAAGGCCATGTAGAAAATTTATTAAAACTACTATGACTGCTATGTTTAGGAATATGTCAGTGGTAAAGCATTTAATGTAGCTTGTTAGATTCACTGTAATCCTTCTAATTTCTTTGCAACTTCTTAATTTTGTGAAAATTTGTATATATGAAGAATTTGCATGTATGTGTATTTACAAATTTTTTTAAGTATCTTGAATTCTCAGACTGCAAAAGGCTTATTTTAACTATTGATTTTTTAAAAAAAATATTGTCTTTGAATGTATTGGAAGCAGACATGCATTAACTGTGACATGATTGCACCTCAGTTTTTTTTCTTTGGACAAACTGATATTAATAGGACATTTGTTTATGTTCATTTCTAGGGGAAAGAAACTGGAACCCAGTGTTACCTTAAAGTTATAGAATACTTTGTTTAAAAAGGCAACGATACTAATGTTTAGTTATATCTTTATGTTAATATTCAAGTGAACTTGATTAAATATTTATATAATGCCTGATTCATCCAGTGATAATCTGGCAATCTCATCAAAACAGAACACAACTGAAAAACTTGTAATAGTTTTTGTTTTTTTTTTAATGCCTTTGAGCAGCCCACAGAAGTCACACAGTCCATATGTTAGAGCTCATGTTTTTATGTGAAATTTTGATTATTAGATTTCCCAGACCGTGGCATATTAACAGTTCAGAAGTTATGGCTTGAAACGAAGGAGATAGAATGTATGACAAGCATACACTGTCCAAGACTAGTTAGTGTAGGGACAGCCAGCCGTTTAGAGGGCATCACTATATACACCATCTTCTGAAAATTGCCTATTACTGTGACTCTGTGTCATCAAGAAAAGGTGAAATTACATATGTAAATATGTAATACATATTTGAAAAGTTTTCTTACAATACTTAAAATTGTTTTTAAAGCTTTGGTATTAAAAGAGGTGAACATCAGTTTCCTCAAACATTATTCGTGCTGAATACCTTTTCAAATGGTGACTACAGGAGTTGTTTTCATAGTATATTAAAATCTGTGTTGAGTTTTAAACTTCTTGAAGCATTGCTGTCCAGTGCATTATCTAGCTGAATGTATAGTTGTCTGAACTACTTTGATCAGACTGGGAAGTCTCTGCCCCCTTTCTGAACAGTATGCCTCTTCTCTTAGAATTAAATGAATGCTGCAAAGGTCTGGGTGTATGTCGGTGTATACTTGAAATCTCTCCAAATTTTTGGAGTCACCTTCCAGCCCCCTCATGGAGGGAATACTTAAGAGATGTCTTTGAATTCCTATGTTTTAGATTGTATTGGGTCCCAATCAACTCTTGTACCAAGTTATGCTATACCATTGAAGGCCATTACCCAGTTAACCTACCAGGCTTTCCATCTAAGAAATAAGTAAATTAAACAGTTGTTATTAAAATTATTTTAAAGACTATTTTTTTCTGGGTAAACCTTGAGGTTTGTAATTAAGTGGAAACTCCTGTTGACTTTGAATGCTATAAAATCAAAATGCTTAGTGTAAGAAGTGATCCAACTTTAATGTGGATTTGAATCCTCAGACTTTCATATTCAGATTTGCTTCTGGTTTTACATGGACTATCAGAACTGTGTTGAACAGTGAAGAGGAGAAAATACTCAGTGGTAGCAACATGAAGACGCAGTTTCCTAACTTACTGTACTGGTTGAGTCATCTTCTCTCCTTTTGTGTTTGCTCAGGAAAGAAAATTTTCTTTTAGGGTGACAAGCTTTATTGATTACTTTAAAGGTATATTTTACTCTTATTTTTGTGAAGATAGAGATCAAGTAGTCACTTGCTTCCGCAGAATAATTCTTTCTGTAAATTTGAAGAAGCACATCAGTGCTTGCTTTTTACTTCTGAGTTGCCCCACCTCCCAACATATATCCTCGTTGGTACAGTTCCTGTAAGTTGGTAAAATGAAGAGAATAACTTAACTGGCTGCTTTCCAAACATTTTGGCCTCAGGACTATTAACTGTTTTTAGTTATTGAAGATCTCCAAAAAGCTTTTGTTTATGTAGCTTGTATTGCTCAGTATTTGGTGTATTAGAAATTAGTACTGAGATAGTTTTAAAACATATTTATTCATTTAAATGTAACAATAATAAACTCATTACACATTAACATAAATACCGTTTTTGATGGCAAATAACTGTTTTCCACAAACAGAAGACCATTGTTTACATTTTGCACATCTCTTTAAAAATCTGGCCCAACAGAAGCAGTGGGATTCTCACACTGCTTTCACATTGCAGCTCTTTTAGGTGACACAGTGTGTAGGCACTGGGAAACTCCACCACGCACTTGGGAAGCCACGAGTGAAGCAGACACATTTTAGTATGCTGAAAATGGTTTTGACTTGGGGTTTTGCGGGGGACCCGCGGGGTTTCTCAGACTACAGTGGTTTGAGAACCACTGCACAACACTTTAAATTTGTATTTTCTGTGACAACGATGTTTAGTTGTAGTGTAAATATACTTCTCTCTGAACTTCTGAGTGTTTTTGTTGGCTTGATGAGAAAAATTTAAATTTCAGTTGAAATGGCAAACTTTTTAAATGTTGTTTTCTGGATTTTCTTCCTTTGATTTTTATTTGAATGTATTTCAGTAATAATGAAATTGGTGAATATCTCATTTTTAAAAGGAATATTCCAAGTTGTGGCTCTTGGATATTAGTACTTATATTAGAATTATTTATTCTTTTGACCACTTTGAAATTGTGGTATTCTTTTGGTAGAGTGTCAGATAGCTATTTTAAAATTACACCTTGCTAAAGAAAGTTCAAAAATGAAGAATAATTTCTTATCTCTACTGTGTTTATAGTTAACAAAGAATTTTAACTTTGTGTATGTATGTGTGTGTATATATATACATATATAGGAATGAAAATAGGATTTCTCTAACAAAAATCATTACCTTCCAAGACGTCGGCTACAGTTAAAGGAATGATGTATTTACTTAAGAAAGAAGTTTGCTCTGGGTTTTTCCCCCAGTGGTTTTTTATACTTGTCCATTTTTAGAAAGAACACTTGTTGTTTCTCATTTAAACAGAATGTTTTTAAATTCTTTTGAAGACATTGTGACTTTGTAAAAGGTAGTTTATGATACATAGTCAGTCACCTCTTGCTGCTGTGGTTGGCATACAGTAAAACATGCTGCTGTCCTCAGGCCGGCCTGTGCCTTGCTTCTTGGGCCTCTTTGTTCATGTTTGTGCTCCTGCTCCAAACTCACATTCAGAGTGACTCACCTCATCTTTGGCCTCCACTTGCAGTCTCAGATTTATATCAGAAAGTTAATCTCTACGGGACCTTATAAAGATATATTTCTTTAAAGATATGACTTGAAAGTAATAATGGTGACGGTATTACAGAGTGTGGTTTATTAAGCTCTTTTAGTGTATCAGAAACTTGCTAAATGCTTTTCATGTATTATCTCATATGGTCCGTAAAGTGGGCTCATACTAAGGATGAAAGAAGCAAGGCATTTGGCTAATGACAGGGCTTTTGCTCTGGGGAGCAGGTGTTTTATTGCTGGATTAAGATGCTCTCACATTTATGTGTAAGCAGATTTTTTAAAAATCGTATGAAATTCTAAGAGAATCTCTTTCTATATCTTATATACCTAATAAAAATCATTTTTAATTTTGATTCCATTCATAATTTGCTGAAATCAGTAGTTTATTCTCTAGGGTTTTATTTAAACTTTACAAGTAAATTCATGGGGGTAAATAGTGGGTCAGGTTTTAAAATTAAGAGACATTTGAAGTATCACAATAACTCCTGTTTTGAGAAACATTCCAACTATTAAGTCTGTGCCCTAAACAGTAGTAAAATTACTTTTGAAAGGGTGCTGTTACTAAAATGTGTTATTGTATTGAATTTATATTCATTAGTTAACTTTTGCCTTGTATATTTTAAAACATGTCATTCATTAAAAATTTTATGTGGTATATTTGAACAATTGAATATACGACCAAGATGTGCTGGTCATATGTTGTGCTGGTGAATGCTTCTCTCTCATGAAAAAGTGTCCTGTTCTGTAGTGCTTACTGATACATGTGATATTAATACTCTCACCATGGCTGATTTCAGCTACCAGTCTGATGTTAATTTAATTAAACTTGGAGTTAGACACATCAGCCTCACTTTGCAGGCCAGCTCCAGCAGGGCACAGATGGGTAATTCCACAACCCAGTTCATTAAATTTATTGGTTATTAGGTGATTGTATGTAGTATTTGAAGAGCCTTCTGTGTTGTTAATTCAGTAAGCATTTGAACACTAGTTTACTTAGGGCTTTCCTGGTGGCTCAGACAGTAAAGAGTCTGCCCGCAACGTGGGAGAAGGGCATGGCAACCCACTCCAGCATTCTTGCCTAGAGAATCCTGTGGATAGAGGAGTCTGGCCATCCACAGTCCATGGGATCACAAAGAGTTGGACACAACTGAACGACTAAACATAGTAATTAATTACTTCTAGAAGTGTAGTGGGCACTGAAGTATTTAATCTGGAAAGACCCCCAAGTGTTGTGAAAACCCTGGTTTAAAAAGTCCAATTATTGTTCTAATGTAGAGGTTGCACATTTATGGCATTTACTCTGAATTCTCTCTGCAGTTGTGTTTTGTTTGACCATCACCGTGTTTTAAAAACTTGAATTCTGTGTAGTTTGAAGGGTGTTCGTACTCTCAAGGTGGCCACTAGCCTACTACTATAAATTTTCTGAGCCTCAAACGTTCAAAAACGTTTTAAGGCCTTTGAATTGGCAAATTCTGAGTAGACATAAAAGGGATCCTCTTATGCCAGCTGTTAACTGTTCTGATTTTGGAGTCAGTTCTGTAGGATTTGAATTTATGATGCTATTTTCTGGTGAAGACTTGCCAAAAATGTATTTCCTTTCAAACTCGATAGCCTCTATGTATTTTGCTTATTTTATGCTAATGGAGGAAGATTCAACATGCTTAACTATATTTTTGAAATCTAGGGTCGTTGAACTCACAGGGCTATGGAGTTTAAAGATTCAGGCTTTTGTAACCAGGAAAAGTGATCCTAGATAAAATATTTTAATTGGTGATTCAGATGTTCATTGGTTAGTTTCTTAATTGGTTCTCTGGAATCTTAAATAGATATTATCCAAATTACAGTTTAACCAGTGAGACTTAAAACTTCTCACCTTTTCCTCAATCTTGAGGGACAGAGAAAGCAAACAACCCAGAAGCCTTCTAATTTTGACTAAATAATCGTTAAGTAAAAGGCATGAAAGGATTGTGAATTAATGTTACCCAGTGTTTCATAGAATGCTGTGGGTACAATCAGGTTTTTTAAAGACTTTAAAGGTTTTTTATATGTTACCAAAATATAAGACATGTTTATGATGTTTAAAAATTACGCAATATACAAAGGGGTATAAAGTGGAAAAGTGTGTCTCCTTCCTGTGACTCTCTTCCCACATCCCAGGGAAATACAGTTACTTGTGTTTTTGTAGTCTTTCAGAAATGTTATCATTTATTATATACTTCTTTCTCTCTATATATATGCCACTTGCTGTCCTCTGTTGTTCTAAATGTATGGTTTTATAACTTGATTCTCTGTTTAACTTGGTTATTTTTCCATATTACCACATCCAGCTCTAATTCATTATCTCTTTGGAGCTCCAAGATTTCATTATATGGATGCCCCTTTTGAAGAATATTTGTTTATAGAGTTTTTCTACTTAAAAAACATTGTTAAAATGAGAATATCCTTATGCATATATGAAGGTTAGTCATGAATCTGCCTGACTCTAAACTCAATAAAATAGACGTCATTCAATTTTGAATCTCACCTGCAGATTCTGTATGACTGTCTTAAGATGTTTGAAAAATCTCATACTTTTTAATTGAACTGTGAAGGCCTTCAGTTAGTTCACTGAAAATTGTGCAAGTTCACATCTATTTAGCACCTTAATTTTAATTTTTCCGTGACCCTTGACATTTCTAAACGTTCAAGGTTTGGGACTATTTTCTATTACTACTTGTTGGTATTATGCCTTTCCTTATCTACATTAGCTTAGAATATAACTTATTTTTGAGATGAGAACATAGAATTTAATTTGGCAAAATCTTTTGGCACAACCACATGTTTTATTTATTACTTCTCCAAAATTAACTCCCTTTGCCTTAGAAAAGACTTGGGTAATAACTGAAAGTTCCAGTTCTCATTCCTCACAAGATTATAGAGTCAAGAATTTCTTTATTTGTGTTTATCATTAGTCAAGGACAAGTCTTGGTTTCTGGAATAGTTTATGAGAAATAATATCAGCACTTAAGGCTAAGAATAGGGAATGAGATAACTGAGAAATCTGAAAGAAAGAGCGAGGCCGTTTTAGTCAGCAGGGCATATCTTGGAAGATGTTTTGATATGACAAGATTTATGAAGACCAGTCTTAATTGCAAGAGGTGGTCTTAGGTATTAGGCAAAAACAGGTTGATTTCAATTTTCATTTCAAATATATGGTAGATATATTTGATTTATTGTTCATTGTGAAACATTGTTGGAATAATTTTTTCAAAATAAAGACTCCTGAATTTATGTACCATTTGAAAGTAGTAGCCTTTTTCCTTTGATGGTCACAGAACATAACAAGACATCTGGAACACTGAAGAGTAATGTATTTCCCTTTTGTCGTGCACGTTTGTTCCTGCCAAGCACACGATGCATCTGCTTCCAGCCTTACTTTCTTTGTTCCATTAGTTGTGCATTAATAGCAACTTTTGTCACTTTCTCTTTGATTTTTAAATTACAAAGCATCTGCTTTTTAAAGGCACGTATTTATTACTGAATTTCCAGTACTGATTCCCGATCCCCAAAGGATGACATTTTTTCTTGAAATTCATATTGTTCTAGCTTGATTTTTAAGACAGTGGTTTTTGTAATTAGATTTTAATTTCTCTACTACGAACTGAAATTTAAAAGGCACATAGTAAACTATCTTTGGTTCTTCATATGTCTAATCTTATTTCCTGGTAGTAGCCATTATTTTTTGTGTCCCAATTCTGTACATTTTTGTTGTTTAAATTACTTTCAT EMBV3_38209 CCTTGAACCTGACCAGTGAGCTTTTGCAGAGTCTGTCTGTTACTTTTGATGGAAAAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25316 ATCTTCATTCCTCTACCCACCCTACCCCAGCTCTGAAAGGCAATGCATCAAGCTCTCACG Gene BVV0102_012166 - 0 NULL GK000005.2:116048710-116124286 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35707 TTGCTGTCCCGTGTACCTCCCTAGTGCCCACCTTGCTGTGAAGAACTGGGAAAGACTGCA Gene GeneID:789296|ARHGAP27:NM_001102352:302_cdna Constitutive 1 NULL GeneID:789296 19 GENE ARHGAP27 MGC140292 Rho GTPase activating protein 27 EMBV3_10320 CAGTGCAGCTGGATGTCCTTATTCCCTCCTCACCTGAGGCCCTGTGGGAATTTATCATCA Gene BVV0102_279215 + 0 NULL GK000025.2:20165903-20189254 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144714 TCONS_00144716 1 XLOC_088630 Coding TCONS_00144716 XLOC_088630 Coding Coding EEF2K 25:20139348-20169055 j TSS108591 4877 1 TCONS_00144716_3 449 0.103137174492516 11 0.83619470813977 0.000198929491187433 0.000602165437655476 0.000941184547035089 0.000610488692833471 0.000876022160113422 5.51428881333536e-05 0.000118033776393761 1.27078405765244e-08 0.000498726256878761 0.000111140042868184 6.99478872287568e-05 7.33039644419108e-07 2.98922758733188e-05 4.15328621117481e-09 8.64768436647608e-05 0.000192263628804883 0 0 0.000872011577031998 0.00101001098888737 9.00669055124765e-09 6.04490182515831e-05 4.50413236193892e-11 7.21084672557307e-10 0.000723026390196346 0.000865432554786224 0.00027529604940004 3.34592531800013e-05 8.76279786021569e-06 6.28686224064263e-05 XM_005224739.1 EEF2K PREDICTED: Bos taurus eukaryotic elongation factor-2 kinase (EEF2K), transcript variant X1, mRNA. 0.0 7023 100.00 0.798236620873488 NM_013302.3 EEF2K Homo sapiens eukaryotic elongation factor-2 kinase (EEF2K), mRNA. 0.0 1602 84.77 0.290342423621079 TCONS_00144716_3 sp|O00418|EF2K_HUMAN EF2K_HUMAN Eukaryotic elongation factor 2 kinase; 0.0 704 92.15 0.848552338530067 2 coding 0 0 0 0 -0.274627836908268 0.0588908053605222 -0.00730357602102691 0.881145310942383 GCATGGGGAATAAGATTCCTTATCTGTCCCTGGGGAACCTAGGGCATAAAGCGGTGGACATCATGCAGATGTGCATCATAGAGCTGAAGGAGAGACCGGGCCGGCCGCTATTCCACCTGGAACACTACATCGAGGGCAAGTACATCAAATATAACTCCAACTCAGGCTTCGTCCGTGATGACAACGTGCGCCTGACGCCACAGCAGTCAGCCAAGACCATCTTAAGGGGGACAGAGGAAAAGTGCGGGAGCCCCCGGGTGAGGACCCTCTCAGGGAGCCGGCCCCCACTGCTGCTTCGCCTCTCAGAGAACTCCGGAGATGACAACATGAGCGACGTGACCTTTGACTCTCTCCCTTCCTCTCCGTCTTCAGCCACACCACATAGCCAGAAGCTGGAGCACCTCCATTGGCCTGTGTTCAGCGACCTTGATAACATGGCACCTCGAGACCAGGACCCTCTGGACAACCACCGGGACTCTGAGAACGGTGGGGACAGTGGATACCCCAGTGAGAAGCGGGGTGACCTGGATGACCCAGAGCCCAGAGAACATGGCCACTCAAACGGTAACCGGAGGTACGAGTCGGATGAAGACAGCCTGGGCAGCTCCGGACGGGTCTGTGTGGAGAAGTGGAATCTCTTCAACTCCTCCCGCCTCCACCTGCCGAGACCTTCGGCCGTGGCCCTGGAAGTGCAGAGGCTCAACGCTCTGGACCTCGAGAAGAAAATCGGGAAGTCCATTTTGGGGAAGGTCCATCTGGCCATGGTGCGCTACCACGAGGCTGGCCGCTTCTGCGAGAAGGACGAGGAGTGGGACCGGGAGTCGGCGGTCTTCCACCTGGAGCACGCAGCTGACCTGGGCGAGCTGGAGGCCATCGTGGGCCTGGGACTCATGTACTCGCAGCTGCCCCACCACATCCTGGCGGATGTCTCTCTGAAGGAGACAGAAGAGAGCAAAACCAAAGGATTTGATTACTTACTGAAGGCAGCTGAAGCTGGGGACAGACAGTGCATGATTCTGGTGGCACGAGCCTTTGACACTGGCCAGAACCTCAGCCCTGACAGGTCCCAGAGCTGGCCAGAGGCTCTCCACTGGTACAACACTGCCCTGGAGACAACTGACTGTGATGAGGGTGGGGAGTATGATGGGATGCAAGACGAACCCCGGTACATGCTGCTGGCCAGGGAGGCGGAGATGCTGTTCACAGGCGGCTGCGGGCTGGAGAAGGACCCACAGAGATCAGGCGATTTGTACACCCAGGCAGCCGAGGCAGCGATGGAAGCCATGAAGGGCCGGCTGGCCAACCAGTACTACGAGAAAGCAGAGGAGGCCTGGGCCCAGATGGAGGAATAACTTGCTGGAAAAAACCACTGCCAGCCAGCCCCAAGTTACAGGGCTAGGAGAAGGGGGAAGAAAAAGACTTCTTACTGAGGGTTGTTTGGGGGCTGGAGCGGGCAGATGTTTTTAGTAAATCAACTTTTGTATGCTATTTTTTAACTCTTGAAAATGTCTTTGCTACCACTGGAGACACTGCAACTGTCCCCTAGGGCTCTGGGGATTGAAAAAGCAGCCTAATGAACCAATGTATCTTTCTGAGGTTCTTTTTCTGTGTTTTGTTGTGGTTATTGTTGTTGTTGTTTGTCATGAGATGTAAGAAAATGGATCTTTTCTGCCCTGGATGGAAAATATTAAAGCTTTGCTCATCAAGCCTTTTCAGGCTGGGCTGAAATCTCAGGCCCACAGAGCCTGTGTTTCCTGAGTCAGGATGAGGTAGGAAAGAGCAGAGCTGCATGTTAACTTTCCATGAGGTGTGTATTGTCACGTCTGTCTTAGAGCAAAGCCGTCTTTCTCAGAGCATTTGGAAGAATGTGTGTGGCATTTTTTGGTGTGTGTAAGACTGTACATCTCCCAGGACCCCTTCTGACATGGGGGAGGGCCCACACACTTTTCTTATCTTTTAATTTCCTTCCTGAAATGCAACTGATTTTGTGGAATACAGCCAAATTACATTCTGAAGTGTGTTTTCCACAGTGGGCTTTACAAAACAGGTTTGATTTCTATATGCACACTTTTACTACCTCTAATTCCTGCCTCAGCTCGTGTGGAGGTGGGTGCACCTCCAAGCTTTTACTTGTAAGGGCTGTGGCTTGGAAGGTTGAAGCCTTTCCTCCAAGCAGACATATACTCTGCATCTCAGTAGCAGCATCCACAATATGACTGAAGTACCCCTTGTACAGTATTCCTCTGTATTTTCTTAGCATCTGACGTTCTTAAGAAGAATCTGCTCCCAACACCCATCCGCGGCATTTTCTGCTTGAAGCTTGGCTGATTTTCTTGTCATTTGCAGTAGGATGCTTTCAGCAGCAGTCCCTTGAGATTTGTTTAAGCCGTTGGAGAATGAGAGGGCAAGAACTATAAACACTCATTAATTCCAGTGGTTTCCCCAGGGCCAAGCTATGGCTATCTGTATTTAATAAGTGTTCTTTTTCGAAGGATTTCAGATTTAACATCAGTGTGATTTCAACTGATGTTTCAAATAGCAAAGAAAACAGACTGCTTTGATCAACCCCAAGTGCTAAAGCAACATCTCTGTTTAAAAATCAAAACATTAAAAAAAAAACAGAGCGTAACATACAAACCAGTTCATTAAGACAGGTCCTTCAGCCATGTTAGTGTTAAGTACTGTGGAGTCATGACCCTGTGCATGTATTCGGTACCAAAGTTAAGAGTTTACCCTAAAGGAAAAATCAAACAGAGTAAAATTACCCTTGAAAAGTGCTTTGGATCACCTATAAATGACGGGTACCCCTGTTTTTGTATTTGGACTCACCATAACCAGTTTCCTCCAAAAGCTGGAACTAATTACCCTTTTGCTGTTTGCACAAATCAAGTAGTTGGCTTGCCTTAAGTTGTTTGTGTGTTTTAAACCAGTGCATATAGTTAATTTGCATTTGTTAAATGTAAGCTAGAAGCAACTTTATTTTGACTTTTCAAAGTTCTCAAACCTCATTAACTGATGCTTTTGTTGTTGCTGTTGTTAGTTCAACCAGTCTCCTCGCCCTCTGAGATTTTATTATGCAAATCATTTATATTCCCTGACCACCTGTCTCATTTCCTAGTTACATGTCAGTGCTTTTCTGTAACACAGGGATTGGCAACTTTTTCTAAAGGGCCAGATAGTAAATATTTTAGGCTTTGTGGGCCTTATGGTCTCTTGCAACTACTCAGCCTTGCCATTATAGTACAGAAACACTGGTGAATGATACCTAAATGAATGAGTGCAGCTGGTGTTCCAATAAAACTTTATTGACAAAAACAGCCTGCCTGGGCTATAGTTTGCCAGCCCCTGCTCTAATCCTGACTAAGAGTTACTATATTAAACCCTGAAGCTGCGTGTTAACTCAATTTTTCTTCAATCTCTAGTGCTTAAAAACACAGGGCCTTGGCACTGAGTAAGCACTCAGTAAATTCATAAAAAATGGAGTGTTTGTGGCTCTAGTTCCTCCAGCCTGTCTGGAATGGCTTGGTCATCTGTGCAATTCCACCCATCCATATGGCTTTAATGTCACCAGGTGGTCCCCTTCTCCTGTAGGAGACTGGAATGGCCTGGATATACTACAGCTAATCAAATGCTTCTTTAAGGATCAGTGAGAGCAAAGTGATCTGCAAGACACAAATCCTTCTGAGCTAACAGAACTTACTCCACCTTCAAAAGATAGTTCTCTGCCTTCTAAAATTGGCTAGGGCATCTTCTTTTTCCACAAATGCTGAACATCCAAAAAGCAAAAAACCTCAGGACATTCCAGCCCAACTGGGAAGACATCAGAGACTATCTTCAAGTATAAGAAGCACTTGAAGGTCCAGGAGATTAGTGGAGTCAAGGATATAATCAGTATCTTCAATCACAGATGGGAAATCCAAGGTTCTGAAAGGTAGACTCTTTCCAAATATCCTGCTGGTTAGAGGCTAAGCTGAAGCCAGGATCTGCCAGCTACTCTTAGAGGATTCTGGGAATAAAATTTAAAATTAAACTGCAGTGAACTGGAGTGTAATGTCTCTCAGTTTTGCTATAGGTTTAAAAAGAAAAAAAAAAAAAAGCAGGCTTTATGGATGGAAGTAGGAAAAAAAAATTCCTAGCCCCCAGTGCAGCTGGATGTCCTTATTCCCTCCTCACCTGAGGCCCTGTGGGAATTTATCATCAAATGCAACATTGATGAGTCAAGCCAGGTAACTACTGTTGTTGCTATTTTAATGACTTCCTTTCCTTTCATCCCAGCACATTTGTCTGCAGTACTAGACATGTGTCACAAATCAACAAAATGTTTACACAAGTATGTGCAGCTTGTGGGGGGAGGGCAGGGCGAAGGAGACAAAATATGCATATTCTCTGCAATTGTGCCTGTTACTCATTTTTTCTAATCTCTGAGGTAACCATTTAACCTAGACAAGGTGGACACTGGGTGGGACCCAGAGAATACAGTGGCTTGTATTATAGTTTTATTTTTGCATATATATTGTTCAATTTTGCCTTTCCAAATAAAGTGATTTCTTTCTTTCTGGTCTCAAATTCAAGTGTCTTCTGGTTACAGATGAGTGAAGGAGGTGAGTGGAGACAGAGTGGATTGGAGGCCTTAGTCCCACCTGAAAAGCAGCTCAGATTCAGCTCCAGATGGGTTGTCCCCATGGGGAGTGTGGGCTCAATGTTGCCCCCTTTTCTAGTTTTTCAAACTGCTGAAAATTTGATTTGTTAATGCAAGTTTTCTCAATTTTTAATATTTCTAATAAATTCTTACAAAAACCTTCCAAATTTGGCACATAATGTTTTCCATTTGCTTTATATAAAGGATGTACCCCTCTCTCTCTTTTTTTTTTTTTTTT EMBV3_27989 CATGGCCAAGCAGCACTTCTCCAGCAGCATGGTCAACAACATCATCAACCTGTGCCGCAG Gene GeneID:281405|PKP1:NM_174145:10_cdna Constitutive 0 NULL GeneID:281405 16 GENE PKP1 NULL plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) EMBV3_35690 AGATGAAGCAGAGGCTGAGCGAGACTGAGCGCAAGAGGAAAAGGCCAAGATTGACAGACA Gene GeneID:540888|PTPN2:NM_001035431:173_cdna Constitutive 0 NULL GeneID:540888 24 GENE PTPN2 MGC127015 protein tyrosine phosphatase, non-receptor type 2 EMBV3_04919 TTTTATGCACATCCTGACTTCCCATCAGCAGCCGCACTCCCAGATCCTTCACCATCACCT Gene GeneID:506645|UBAP2L:XM_002689274:23_cdna Constitutive 0 NULL GeneID:506645 7 GENE UBAP2L NULL ubiquitin associated protein 2-like EMBV3_00509 CATCTCCAGTGATGTGTAAGTGAGTGAGAGAACTGTAAGAAACAAACTGAGTCCGAGAAA Gene GeneID:784171|LOC784171:XM_002684586:99_cdna Constitutive 0 NULL GeneID:784171 1 GENE LOC784171 NULL similar to chromosome 21 open reading frame 55, isoform 2 (predicted) EMBV3_18154 CACATAATGGTGTTAACATTGAAGAGCTCATTTCCCACCAACCTCACAGCAAACCCACCC Gene BVV0101_002640 + 0 NULL GK000012.2:1245090-1527003 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18549 ATGCCCGAGGACCAGGCCGGCGCAGCCATGGTCTCCTGAATGATGCAACTGTAGGTATTT Variant GeneID:540744|ZYG11B:NM_001102247:109_cdna 164^329 1 EMBV3_06099 GeneID:540744 3 GENE ZYG11B MGC166395 zyg-11 homolog B (C. elegans) EMBV3_34118 CTGGGCCAAGAGGCGGAACCGACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTA Gene BVV0102_123030 + 0 NULL GK000030.2:89163186-89593347 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040888 TCONS_00229354 TCONS_00188848 TCONS_00176420 TCONS_00091551 TCONS_00135546 TCONS_00210913 TCONS_00166151 TCONS_00065232 TCONS_00196835 TCONS_00161487 11 XLOC_024702 XLOC_138849 XLOC_114889 XLOC_106198 XLOC_056325 XLOC_081769 XLOC_129423 XLOC_100989 XLOC_039954 XLOC_118500 XLOC_098376 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_09501 CTACTGACAACAAACACCACACTCACAGTCGGTCTCACGTTTCACCCCAGGCTCAACTGA Gene GeneID:616169|TCTA:NM_001034789:304_cdna Constitutive 0 NULL GeneID:616169 22 GENE TCTA MGC128245 T-cell leukemia translocation altered gene EMBV3_10246 AGAGATATGCAGAAGACTTAGACCAGCCGGAAAGGGATGTCGCCACCAACATGGACCAGA Gene GeneID:539603|SASH1:XM_002690315:7_cdna UTR3_Alt 2 NULL GeneID:539603 9 GENE SASH1 NULL SAM and SH3 domain containing 1 EMBV3_15997 TCATATAGCCAGAGGAGAACACAGAGCCATGCTGAAGTGAACACCCAGGCCCAGAGATGA Gene GeneID:540676|IKZF3:NM_001081613:201_cdna Constitutive 0 NULL GeneID:540676 19 GENE IKZF3 MGC148465 IKAROS family zinc finger 3 (Aiolos) EMBV3_36080 GTACAGTGCCGTACAAACCGAAGTTCTGCCTCTGATGTCTGTTGTGAGTTTGTTTCTTTG Gene GeneID:507482|FMR1:XM_002699624:19_cdna UTR3_Alt 2 NULL GeneID:507482 X GENE FMR1 NULL fragile X mental retardation 1 EMBV3_25879 TGCCGACGAGCCTACTTCAAGAGAAATAAGGTATGTGACTGGTGTAAGCACATAAGACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16138 AGTTCTTCCAAGGGCCCCTGAACATCATCGACATTCTGGCCATCTTCCCCTACTACGTGT Gene GeneID:534070|KCNG4:XM_002694743:127_cdna Constitutive 0 NULL GeneID:534070 18 GENE KCNG4 NULL potassium voltage-gated channel, subfamily G, member 4 EMBV3_27273 CGGAAAATCCAGGGACTCCTAAAGTCGTGCCCTGACCCTCTCTGGCCTCTGTGACCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10471 TCCTTACGTCTACCTGCCTTTTGGAACTGGACCCCGAAATTGCATTGGCATGAGGTTTGC Gene GeneID:526682|CYP3A5:NM_001075888:233_cdna Constitutive 0 NULL GeneID:526682 25 GENE CYP3A5 NULL cytochrome P450, family 3, subfamily A, polypeptide 5 EMBV3_24015 TTGGGGGAACTCTCAATAACATTGAACTTGGAAAGTTTTCATTCCCAATAATGCCAAAGA Gene BVV0101_058940 - 1 EMBV3_06581 GK000010.2:76928760-76943980 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22354 CATGGAATTCAAGCTGATAGAACCCGAAGAGGTCGCTCGGCGTTGGGGCATTCAGAAGAA Gene GeneID:541166|ETV5:XM_002684842:193_cdna UTR3_Alt 2 NULL GeneID:541166 1 GENE ETV5 NULL ets variant 5 EMBV3_26541 AACATGCTTGGTGTGGAGGCAACTTCCTGGAGGTGACAGAGCAGATTCTGGCTAAGATAC Gene GeneID:100337101|LOC100337101:XM_002699703:40_cdna Constitutive 1 NULL GeneID:100337101 X GENE LOC100337101 NULL vesicle-associated membrane protein 7-like EMBV3_13814 TGCTTCAGCCTTTGCTATACTAGTTGACACTGACCATCCACCTATGCATCCTGGCTAGGG Gene BVV0101_007302 + 0 NULL GK000013.2:25683657-25733563 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20348 TGGATTATGAGCCCCGATTCTCACCCTGAGCTAGACAATCAGACTGGAAGGGAACCCCAA Gene BVT0102_018316 - 0 NULL GK000007.2:21667169-21676681 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29628 GCGCTGGTCGCTTTTTTCCTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTT Gene BVV0102_420815 - 0 NULL GK000022.2:373327-495505 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00110189 TCONS_00222868 TCONS_00220566 TCONS_00250669 TCONS_00118040 TCONS_00238581 TCONS_00078426 TCONS_00203998 TCONS_00206300 TCONS_00207933 TCONS_00251678 TCONS_00056149 TCONS_00179680 TCONS_00118487 TCONS_00125692 TCONS_00145751 TCONS_00133817 TCONS_00002600 TCONS_00091907 TCONS_00160960 TCONS_00242415 TCONS_00109592 TCONS_00031759 TCONS_00137167 TCONS_00110426 TCONS_00206299 TCONS_00218430 TCONS_00246741 TCONS_00232829 TCONS_00132066 TCONS_00103962 30 XLOC_066093 XLOC_136175 XLOC_133883 XLOC_153612 XLOC_072206 XLOC_145248 XLOC_047314 XLOC_124314 XLOC_124877 XLOC_126448 XLOC_154619 XLOC_033952 XLOC_109452 XLOC_072644 XLOC_077234 XLOC_088920 XLOC_081223 XLOC_000643 XLOC_056677 XLOC_097853 XLOC_149079 XLOC_065496 XLOC_018004 XLOC_083377 XLOC_066330 XLOC_131750 XLOC_151107 XLOC_142312 XLOC_080699 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_08431 ACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAACG Gene GeneID:540616|MAX:NM_001105633:196_cdna Constitutive 0 NULL GeneID:540616 10 GENE MAX MGC179452 MYC associated factor X EMBV3_04758 TGTTGATAAATTCTATCATATTTAAGTTCTACTGCTGTTCCTCTCTTATTATTGATTAAA Gene GeneID:513985|VPS37A:NM_001046161:49_cdna Constitutive 5 NULL GeneID:513985 27 GENE VPS37A MGC137205 vacuolar protein sorting 37 homolog A (S. cerevisiae) EMBV3_25577 AAGGGGTCATGTGGCTGTTGAGGGGGCTTAGTGATACATGACTCAGAGAGAGGCAAACAG Variant GeneID:618035|RAB27A:NM_001101270:7_cdna 701^749 2 EMBV3_31151 GeneID:618035 10 GENE RAB27A NULL RAB27A, member RAS oncogene family EMBV3_26827 GACCTGGGGGCCCAGATCAGCTGGGTGACGTCGGCACACGGTGGTGCACCTCGCCTGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04115 AAGTTCATGCTGGACATGGACATCGGCAGAACCACCTGCAAAAAGACCGGGCACGCAAAC Gene GeneID:617799|CST7:XM_002692174:91_cdna Constitutive 0 NULL GeneID:617799 13 GENE CST7 NULL cystatin F (leukocystatin) EMBV3_14317 TCACTGGTACTATTCCTGTGATATATCAGGCCTAAATCTGTCATTGTTGGATTAATTAAA Variant GeneID:512846|UEVLD:NM_001098952:19_cdna 212^375 1 EMBV3_24853 GeneID:512846 29 GENE UEVLD MGC152503 UEV and lactate/malate dehyrogenase domains EMBV3_08986 TCTGCCCAGTCATATCCAGAACTGGGTGCAGAAGTATCATCCACAGAACGTCAAAGAGGC Gene GeneID:618452|LOC618452:XM_002683846:1_cdna Constitutive 0 NULL GeneID:618452 X GENE LOC618452 NULL hypothetical LOC618452 EMBV3_11208 GCAAGGACCTGAAGAAGAGAAATACTTTGGGAGAGCAGGAACACATTGCCGGAAGAGGAG Gene BVT0102_417218 + 0 NULL GK000014.2:59436694-59704843 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052029 TCONS_00052023 TCONS_00052028 TCONS_00052032 TCONS_00052027 TCONS_00052031 TCONS_00052025 TCONS_00052030 1 XLOC_031351 NonCoding TCONS_00052030 XLOC_031351 NonCoding NonCoding - 14:59488479-59500453 - TSS38681 3544 2 TCONS_00052030_4 107 0.0727990970654628 3 0.704251231938528 0.000835990952598001 0.000432796573954711 0.000721764518170004 0.000261301697141596 0.000198697889242181 3.87206100403028e-06 0.000119631123785212 2.28496819680008e-07 1.20061005248302e-19 1.20311782465086e-05 0 0 9.31908858636498e-05 0.000114056741809714 0.000100020814913467 0 0 0 3.55496056035142e-07 0.000140948086036764 1.84160107203441e-07 0 0 0 0.000677289880609434 0.000427337909751956 7.99579774131254e-07 0 0 0 XM_871192.5 C23H6orf222 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf222 (C23H6orf222), transcript variant X3, mRNA. 4e-50 205 85.96 0.0496613995485327 0 noncoding 1 1 1 1 -0.0949880796544532 0.556044757505842 0.00305647970603572 0.97341416841718 AACTCCTTATTATGCTTGTGCGATGCACAAATAGGGATGCAGGAGTCAGAGCGAAGCCCTGTGCTCCAGGGCACCAGTCAGTCAGCTGAACTGGGATTGGAGTCCGGCTTCTGATGACTGTCTGAGATAATAAAGAAGATACTAGGAAGCAAGGACCTGAAGAAGAGAAATACTTTGGGAGAGCAGGAACACATTGCCGGAAGAGGAGACCTTGGGTTCACTCCCCTTATATGTATTTGCATTTTCAATTAGACATGGTTAAATATTGAGAATCTTCCAAGCCTAGAGAAATGTGAAATTTTATTCTTGGGAAATCAAGTGGCATGACTGGTGTTAAGGATAGAAAAGATCTAAATGTATACCAGAGAAGGATGAGTCTCTTGATATCCCAAAAACATATCAGTGAGATAGCAACAGATTTTCAGTGCAAGTTTACCATTTACTGAGCACTGTTGTAGATCTGATGACAACTTGTACTCATCTTTAAGTTGCTTATTACTCATTAGTAGCATAAGAAACTTGTGGCAATCTTATGAGAACCTGTTTAGTTTAAGATACGGCATAGAGAGAGATGTCATGTGAAAGTATGAAGTTCAGAAAACCAATTCTCCATGCTGACAGGGGGAAGAAAACTTATGGTAATTAAATATGCACAGTTACTTGCTTTGCCTAATTGTAGAAACATTCCTACTGGCTAAAGTATGCTTTCCTGCTTTTGAATTGACCCTGAAGTCTTTCAGTATTAATTTAATGGGGAGCGTAAGCAATCCTGAGAAGTCCTCCCATTTCTCACCTTCTCTGTCACCTCTTGACAATCACAAAGGTTGGTTGGTAGCATCAGACTCAGTTGAGCACAGTGACTGTAATTTTCTTTCTTTTATCCACTTTAAAGTGTTTAATCTACCCTAGGAACTCAGACAGAGCCAGGTATACCCAGACAAAGGTATTGGTTATTAAAGGAAGCTATTACAAGGAATTGTGGTTGCATGACCCCATTCGAAGCGAGGAAATGTATCCACTCAACTAGGACAGAAAAGACATGTTCTTCCCAGAGGTTTGCCAAAGCTTGTTTTAGGCCAATACATTTGATCTCCATGATTTCCCACAACTGGGGCTGTGGTTCAATAAAGTGGAGTAACACTGTCCTTGGTTTCTGAAAATAAATACGAACTATGGGCACCACCTGGCCATGCAGGTGCAACTGAGACTCTTGCTCACCCTGTGCCCGTTAAGCCAGGACAGCATGTTCTGTCCAAGGATGCCCAGATCATGGCTTCAGAGATGCTGCCAAAGGAAGGGAACCTTTTTCCAGGCAGGATGGGTCATTCAAGGGGCTTGTAAATGTTCTGTGGTTATTCAGTTTTACAACCACTATGTCTGGATTACAGGAAATTATTCTAAACTAGGGCAGAAAGCCTATATTAGAAGCAATCCAAATAGCTTCAGAAGAAGGATAGGGACTCAAATATTTAAAGAGGTTTTGTCTTTTTGTTTCATTTTGTTTTTTTACTAGAAAGTTGCTAGATTGGCCAAGCCAAAGCCCATGAAACAGTAGGGTGTGACCACTGTCTCAGGCAGATTATTGATTGCTAACATTTAAAAAAAATCTTACATTATATTTATTCTGTTGAAAAGTATGTGCTTAGTCATGTCTGACGCTTTGTGACCCTATGGATTGTAGCCAGCCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAGAATACTAGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAGCCGAGGGGCTGAACTTGCATCTCCTGCACTGGCAGGCAAATTCTTTACCCCTATGTCCTTGAAAAGTATACTTGAAAGCTAATACATGTGTTGGGCTTCTTTTTTTCCCCCAGCTGTGTCTAAAGCAGGAAATGATAGATTGTTCTCTATTTCCTCGCATGTGAGAAAAGAATTGTCAAGCAAATAATTGGCTCAGAAAATTTCTGCCCAGTTTTGTGGGTTCAGGGGACCTTAGATACAGTGTAAGAAAGACTCAAAATGAGAGTAAAGAGAGGGTGGAGGGGCATGTCCTTCAAAGCCTTCCTGTGTGACATACTGGTTATACATTATCTCTCTTCTGTCATTTAGATCCTCCCCTCTTGTGTTTTCTTTCCCCTTCTTTGAACTTTGGGCAATAATCAAGCCTCCAGGCTGTGCTGCTTCTTAGAGGTCCCCAGAGGCTTTGGGGGAGCTGGTAGGTTGAGACTGCCTGCCAGCCACCTCATACATTTGCTACGCTAGTCCACTCATCTCAAAACAGCCATGTTCTGAAGACTTTATAGAAGGACAGTCCCCTCTGGTAGAAGAAGATTTTTCTTAAACAAGAATTTTGGAAATTTACAAAGCATTTCCTCTTACAAACCACTTCAGAAGGATCCAGATTATTCACAGCTTGTATATGATTACAAATGAAGTCTCCTCTCAGTAGGCAGTATCCCAGCTCCAGACCCGCACAAACAAAGCAAAAATAGCACATGCTGTATGATTCCTCTTTTCTGAAAATGACTTCGCACCTTCACTGTAATAATATCCTCAAAAAATTCCAATGAGCCCAAATAACGAGAGCAAGGGGCTCCATTCCCTCTAACCATGGGCTTGGTAAGTAGAGCTCTATTGGATTCCTTAAAAGGCTTGTGCAGTTTCTCTCCCAATAAGGTTCAAATAGACTGATGTGTAATTCCGAGTAATTTGCCAGCCCTTCTCCCTTTTTATCATAATATGGTTATGTTAATTATTGTCTTTATCTTCAGGGATCTCATTTTGAGCTCAACTAAGTTGTGAAATTATCTATCGACACTTCTCCAATTTCTACTCTAACTTCCTTTATCAGTCTTGGATGTATAATGTTTGGCTTGATGCCCTGTTAATTATAACATCTAATACTTGCAGAGTCCCAGCCAGAGTGTTTACACAATCTGTTTGATATCCAGAGCAACTTAATCCCCACTTTAGGCAAATCTCGCCCCTCGCTGTCCACCGCTGATTTTGGGATGGGGAAAGAATGACTGTTCTGCAATTTTTCCTACTTCTTTGGCTTTCATTACTCTCCTTTCAAAATTATGCTTCTTTCTCCCCCTTGTGTTTTCTATCACTATTTATTTATTGCATATAAAAGAATTCTGTAAACTAAATTTTGAGGAAGAAGTGCATCCTTCTGCCTATCAAACCACAAAAATTTGTATTGTCTTTGGAACTGTAGGTTACAGGAAATACAAGTCAAAACAATAATTATATAATTGGGCTGAACAACTTGGCAAAATAAAAAGGATAAATTATTGATGAAGATATAATTGGTATACCCTTTCTAAGAAAAAGCTGGAAATATGTATGAAACATTTTTAAATGCACATATGTTTTAAGTGGCTTTGCCTTAAAATTTTTATCCTAAGGTTATTATTAAAATCATGGTCAAAAAGATTGATGAGCAGATACATTACTGAACCATATCTTGTTTTATCTTTTTTATTAAAAACATTTTTTCAAGTATAGCTGATTTACAATTTTGTATTAGTCTCTGCT TCONS_00052017 TCONS_00052018 TCONS_00052019 TCONS_00052020 TCONS_00052022 s 3' 51559 TCONS_00052017 TCONS_00052018 TCONS_00052019 TCONS_00052020 TCONS_00052022 s 3' 51559 EMBV3_19625 ACAGTCCATGGGGTTGCAAGGAGTCGGACACGACTGAAGAGACTGAGCACAGCGCAGACA Gene BVV0102_371864 - 1 EMBV3_43325 GK000019.2:48867610-48871226 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09202 GCTAATAGATGAGCCCAGAGAAAAGGCAGCACAGCTGGTGAGGAGAACACAGCGAACCAT Gene BVT0102_359951 + 0 NULL GK000008.2:26859971-26889477 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227206 1 XLOC_138191 NonCoding TCONS_00227206 XLOC_138191 NonCoding NonCoding - 8:26879484-26933514 - TSS169680 751 1 TCONS_00227206_3 105 0.135818908122503 3 0.986155583112773 1.10765063475994e-09 0 2.74278035534954e-05 8.31652882504757e-10 9.53236309401905e-05 0 6.39091894096311e-10 3.11860476558086e-10 0 0 0 0 0 0 0.000195891575413613 0 0 0 0 0 0 0 0 0 6.10663671187203e-10 3.58995429393427e-05 2.03051229780149e-05 0 0 0 XM_005224297.1 CCDC165 PREDICTED: Bos taurus coiled-coil domain containing 165 (CCDC165), 1e-62 244 72.34 0.524633821571238 XM_005258098.1 SOGA2 PREDICTED: Homo sapiens SOGA family member 2 (SOGA2), transcript 2e-52 210 71.26 0.524633821571238 0 noncoding 0 0 0 0 ACCAGATCTCTTTCTGGGGCAGAGTGTACTTGATGAGGACCGTGTGGTTATGCAAATTACAGGGGATTATTCCAGAAAATGTATGCGCACCTGCGTCACAGGTGTGGCTTTCTTTCCTGGCGGTTCCTCGTGGCGAAGCTCCTCCAAGGAGGTCGGGTCCCTGGAGACAGAGCCGGAGAGGCAGGGGCCCAACAGGACAGAGGGAGACTGCCGGCGTCTCCCACTTGGAGAAGCAGAGTTCTAGGGACGGAGCTAGTGCGGAACAAGGTAGTTCCTCGTTGATTCTCCACGTGGCTGTAGCTGCCGAGACTGGGGGCGGCTGTGGCAGCCTGCCTCCACTTCTCCCTTAAGGCGTGTTCCAGAAGCTTCCTGTGGAGGATCTGGGCGACATTCTCGGGAACAGAGTGATGGCCATTGGGAGCAAGCTGAGCTAGGAGGTGGTGCCTGGAAGCTCCTTCTATAATTATCCAAGGAGAAGGAAAAAGAGGAAAACAGAAATCTAGAAGTAAAGCTAAGAACCGAGATACCATAAACCAGAAAGGGCTAATAGATGAGCCCAGAGAAAAGGCAGCACAGCTGGTGAGGAGAACACAGCGAACTATGCTAAGAGCAGGTGCTGCTTGGCCGGCAGGATCTTAGTTCCCTAACCAGGGATGGAACCTGTGCCCACTTCAGTGGAAGCATAGAGTCTTAACCATTGGACCACCAGGGAAGTCAAAAAAGTGGACATCCTTGAGCCCCACTGACAGCG TCONS_00227204 s 5' 19470 TCONS_00227208 TCONS_00227209 TCONS_00227210 TCONS_00227211 TCONS_00227212 TCONS_00227213 TCONS_00227214 TCONS_00227215 TCONS_00227216 TCONS_00227217 TCONS_00227218 s 3' 4945 EMBV3_21587 GACTTTGGAAGAGAGAACAGAGTGTTCGATTCTGCCCTATTTATGTTTCTACTCGGGAAC Gene GeneID:517192|JUND:NM_001103253:71_cdna Constitutive 0 NULL GeneID:517192 7 GENE JUND MGC165728 jun D proto-oncogene EMBV3_42587 AAGCAGGACTGTGTGCTGTTGCTCAGTACGGTCGTTCTGGGGTTGGAGTTTTCCCCTCCA Variant GeneID:100316905|LOC100316905:XM_002689764:24_cdna 260^385 9 EMBV3_25575 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_05787 TCTAGGTTAATCCGACTAAAGTCCAAGAACACAGAGGACACACCTGCGGTTTGATGAAGT Gene BVT0102_211631 - 1 EMBV3_05841 GK000018.2:51697162-51702115 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09377 GAGACCACCCAGCTCACGGCTGACTCCCACCCCAGCTACCACACCGATGGGTTCAACTAA Gene GeneID:282216|DNAJC5:NM_174533:748_cdna Constitutive 0 NULL GeneID:282216 13 GENE DNAJC5 NULL DnaJ (Hsp40) homolog, subfamily C, member 5 EMBV3_20188 TGGCAGAGTGGGATCTGGGCTTCAGTGTTTCTCTCCTGTTTCCTCTGGTTTGCCACTTCA Gene BVT0102_197076 + 0 NULL GK000010.2:83187782-83480568 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20427 AGGAATTCCCAGGAGTTCTTGCTCCCTCAGGATCTGGAGGATACCCAGCTCTCAGACAAA Gene GeneID:768054|CARD9:NM_001077111:226_cdna Constitutive 0 NULL GeneID:768054 11 GENE CARD9 NULL caspase recruitment domain family, member 9 EMBV3_25716 TTCTAGGTTTTCTGTCCTGGCCCATTGATCTATACTTGGTTTTGTGCCACTACCATACTG Gene BVT0102_127724 + 0 NULL GK000016.2:17561001-18269597 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15399 GACTTCTTAGGCCCCGCTTGGGAGGTTGGTAACCGGACCCTACAATGTGAAGATGAATCA Gene GeneID:509786|BCL2L15:NM_001075417:68_cdna Constitutive 0 NULL GeneID:509786 3 GENE BCL2L15 MGC151911 BCL2-like 15 EMBV3_17438 TAACGTTCTACCGCATCGGGCCCTACACCAGCCTGTCCTGGTCATGCTACCTGAACATCG Gene GeneID:615464|TMEM204:NM_001076377:270_cdna Constitutive 0 NULL GeneID:615464 25 GENE TMEM204 CLP24 MGC143138 transmembrane protein 204 EMBV3_26711 GCCTGGTGGCGGGCCAGCACCCTTTTGTACGGAAAAGAAGCCTTTACTTACGATTTTGTA Gene GeneID:534672|LOC534672:XM_002698175:677_cdna Constitutive 0 NULL GeneID:534672 25 GENE LOC534672 NULL similar to family with sequence similarity 20, member C EMBV3_28462 AGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGAT Gene GeneID:100337255|LOC100337255:XM_002698254:906_cdna Constitutive 0 NULL GeneID:100337255 25 GENE LOC100337255 NULL hypothetical protein LOC100337255 EMBV3_27879 CCCTGTACTCCAGAGTTCTTAAACTAGTGGACCTGGGAAAATTGTGGTCTGCAGGCATGG Gene BVT0102_394264 + 0 NULL GK000001.2:108583229-109550309 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30604 CACTGAGAGCTTAGAACAAACATAGAAAAGACAGTCCCTGCCTTCGAGGATCCCCACTCC Gene BVV0102_102949 - 1 EMBV3_17057 GK000021.2:26119770-26158249 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123277 1 XLOC_074831 NonCoding TCONS_00123277 XLOC_074831 NonCoding NonCoding - 21:26122567-26123542 - TSS92036 975 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.001083550682004 0 5.14687000507368e-05 0 0 0 0.000136996948759806 9.40927883411755e-05 0.000464252004053846 0 0 0 0 0 0 NM_015206.2 KIAA1024 Homo sapiens KIAA1024 (KIAA1024), mRNA. 0.0 847 78.25 0.97025641025641 0 noncoding 0 0 0 0 0.020462027972458 0.848687307384164 0.0158497752411863 0.794033159218036 CCATCGGACATTATCAAGGGATTATTTTAAAATTAGATCTCTTTATCCAAATAAAGTCATAATCATCACATCCTCATTTTCAGTCTGAATTTGCTCTGAACATAGCCTTGCAGAGAAGCAAAGAGTATTTCCCAGCTCACAGTTTTCAGATATTTTACGCCAGTACCTTCTTTAAATGGAAAATATAGTAAAGCAAATCATACTTGTATCACCCATTACTAGCTGATCATAAATTGTTAGTATTTTAGGGCATGCAGCTATGTGGTTTGTATCTGCAAGGCTGGCTTAATAGATGTGCTGAAAGTCACTGTTTGGAACCTGCATAAGCTCTGATACCCTTATTGTAATCAAGGCAGTGCTGTCTTTGTTTATAGTTTATCAGTTTAAGAGCACGGCACCTCCTTTTTCTTAAAAAAAGCTCTGCCGAGAATACACAATTCTGTTAAGTCGTATAAAAATGTGTGAACGTTGAAATCCAACCTGTTTCATATTATAACCAGCCTGCAAGAAGATTGTGCTCAATTGTGTGAATACCAAATCAGAGTATACTGTATATTGTACATTGGAAATTTGTATTTAAAGGCAACAATGTTAATAATAGTTGGTATAACAGGGGAAAAGGGTATTCGATATTTATTAATAAGGAGAAATGCAACAAACTTCCTTATTTATGCCTTATGAATAAAGGGGTATGAAATATTAGGTGAAGTTTTATGTGCACGACTCTGAACTTTAGAGTCTAAAGGAGTGGGGATCCTCGAAGGCAGGGACTGTCTTTTCTATGTTTGTTCTAAGCTCTCAGTGCACTCTTGGTGCTTGATCAATGTTATATAATACCAATAACTAAGCACATTTTTAGATCTTTTTTCAAATGGCTTGTGTAAAATTTGGTTAACGTATAATGGTTGGTTTGAAGCTATCATGTAAAATCTGCCTCTCCAAATATAATCGAGAATAAACTGGAAATGATGAAGT TCONS_00118932 TCONS_00118933 TCONS_00118934 . 3' 2799 TCONS_00118932 TCONS_00118933 TCONS_00118934 . 3' 3773 EMBV3_38553 CCACGCACATTTTAATGGACCACCGGGTTGTTTCCTTGTCTTGGCTGTTGTGGTGAGTAC Gene BVT0102_023502 + 0 NULL GK000007.2:53860390-53892606 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36948 GTCTTTGGGGGCCTCATTGCTGTCTGCCTCATCATGGGTCTCTTCGATGGATGCTTCATT Gene GeneID:541240|SLC16A10:XM_002690111:115_cdna Constitutive 0 NULL GeneID:541240 9 GENE SLC16A10 MCT10 TAT1 solute carrier family 16, member 10 (aromatic amino acid transporter) EMBV3_22584 GTGTGAACACACCTTCACGTGTCCACTGTCGTCACTCCTGGAAGTGTCGTTTCTGCACTC Gene GeneID:618499|LOC618499:XM_002691988:78_cdna Constitutive 0 NULL GeneID:618499 12 GENE LOC618499 NULL similar to family with sequence similarity 70, member B EMBV3_23417 CAGGCTGTTTGAGAGTATGAAGACTGATTTGCCTGATCCATGAATTGAAAAAGTAGGCAC Gene BVT0101_043487 + 0 NULL GK000010.2:100092901-100733080 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13472 TGAAGGAGCCTTCAGCTGTATACATTTCAACTGCCCCAAAATGTATTTGCTACATTTTGC Gene BVV0101_027339 + 0 NULL GK000030.2:90699017-90724319 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244942 TCONS_00244938 TCONS_00244936 TCONS_00244937 TCONS_00244939 TCONS_00244941 TCONS_00244940 1 XLOC_150592 Coding TCONS_00244936 XLOC_150592 Coding Coding PHF16 X:90561726-90701197 j TSS183979 4745 1 TCONS_00244936_6 823 11 0.966057216605722 0.0010281990501484 0.000176442744182115 5.95535512955958e-05 5.25062255698144e-05 0.000145425784086083 0.000359782835711819 0.000510103260060476 4.25888510070816e-09 0.000721171024443148 0.00019840794737515 2.91342586669694e-09 1.78856678459845e-05 4.18612059169623e-08 7.58923826868913e-12 4.06564056682549e-07 0.00176244117167202 0.00134440388302145 0.000541641457131242 0.000760419797335008 0.000980168585751623 0.000229425137191298 0.000838081749098103 0.00171886923148271 0.000974080696735094 0.000996151557358138 0.000527478792005784 0.0013158330687445 0.000158722402391727 4.6404139654284e-05 0.000127525971368125 XM_583146.4 PHF16 PREDICTED: Bos taurus PHD finger protein 16 (PHF16), transcript 0.0 8475 100.00 0.990094836670179 NM_001077445.2 JADE3 Homo sapiens jade family PHD finger 3 (JADE3), transcript variant 0.0 5454 85.50 0.998103266596417 TCONS_00244936_6 sp|Q92613|JADE3_HUMAN JADE3_HUMAN Protein Jade-3; 0.0 1422 83.96 0.998784933171324 5 coding 0 0 0 0 0.41069111699561 0.480968184312645 0.0507962736621516 0.312507804314035 GCGGCGGTGGCAAACTGCGCCCGGCCCGCCAGAAGAGCGCGCGGCGGTCAGAGCGGTCGGACAGCAGGGAGCCAGAGACGGGATGCGTCACGATGAAGCGCCATAGAAATATCAGCAGCAGTGACAGTTCAGAGGACAATCCTTGCACTTCCTCTACTTTTGGCTCAATGTATAGGAGCAAGTCAAAAATGCCAAATGAACGCAAGAAGCCTGCCGAGGTGTTCCGGAAGGACCTTATCAGTGCCATGAAGATTCCAGACTCTCACCATATTAACCCTGACAACTATTACCTCTTCACGGATACATGGAAGGAAGAATGGGAAAAGGGAGTCCAAGTACCAGCCAATCCAGACACTCTTCCACAGCCTTCCGTCAGGGTTATGGCCGACAAGAAAAAAGAGGTCCTGTTTGTCCGGCCCCGGAAATATATCCAGTGCTCCAACCCAGAGACCACAGAGCCTGGCTACATCAACATCGTGGAGCTGGCGGCATCTGTGTGCCGCTATGACCTAGACGACATGGACATCTTCTGGCTCCAGGAACTCAATGAAGACCTCACAGCAATGGGTTATGGGCCAGTTGATGAGAATCTTATGGAAAAGACAGTAGAAGTCCTGGAACGCCATTGCCATGAAAATATGAACCATGCTATTGAGACAGAGGAAGGGCTAGGCATAGAGTATGATGAAGATGTGATCTGTGATGTGTGCCGGTCTCCAGACAGTGAAGAAGGGAATGATATGGTGTTCTGTGATAAGTGTAACATCTGTGTGCATCAGGCCTGCTACGGCATCCTCAAGGTCCCAGAAGGCAGCTGGCTGTGTCGCTCCTGTGTCCTGGGCATTTATCCACAATGTCTGTTATGTCCAAAGAAAGGTGGAGCCATGAAGAGCACCAAAACAGGGACTAAATGGGCTCATGTCAGCTGTGCCCTATGGATTCCAGAGGTCAGCATTGCTTGTCCTGAGAGAATGGAACCAATCACAAAGATCTCCCATATTCCGCCCAGTCGGTGGGCCTTAGTCTGCAGCCTGTGCAAGTTGAAGACAGGTGCTTGTATACAGTGCTCAATAAAAAGTTGCATCACTGCCTTCCATGTCACCTGTGCCTTTGAGCACAGCCTAGAAATGAAGACCATCCTAGATAAGGGGGATGAAGTAAAGTTCAAGTCATACTGCCTCAAACACAGCCAAAGCAGGCAAAAGCTCAGGGAGTCCGAGTACCCCCTACACAGGGCTTCAGAGCAGAGCCAGGCCAAGAGTGAGAAGACCAGTCTACGGGCACAGAAGCTTCGGGAGCTGGAGGAGGAGTTCTATTCCATGGTCAATGTGGAAGATGTGGCCACAGAGCTGGGGCTGCCCATGCTAATTGTGGACTTCATCTATAACTACTGGAAGCTGAAGCGCAAGAGTAACTTCAATAAGCCATTATTTCCTCCAAAAGAGGAAGAAGAAAATGTCCTGGTACAGCCAAGAGAAGAGAGTATTCACACTCGCATGAGAATGTTTATGCACCTGCGGCAAGACCTAGAGAGGGTCCGAAACCTGTGCTACATGATAAGCAGACGAGAAAAAATGAAACTATCATACAACAAATTACAAGAACAGATCTTTGGTTTGCAAGTCAAGCTTGCTAATGAGGAAGTTGCTGCAGGACTTCCTGTGACAAATGCACTAGAAAATTCATTGTTTTACCCACCACCAAGAATTACCTTAAAGTTAAAAATGCCCAAATCAGCCACAGAAGATGGCAGTAACAGCTCCACAGAGCCTGATCATGGACCTCTCTATCCTGATGACAGCTCCCCTGCTTGTAATATGAGGAGCATGCAGGTGGCTCAAGATTCACTGGAAATGAGAATGAAGTCATACCCAAAGCATCCACAAGAGAGCCAGACTGACTGTTTGCTGACCAATCCCAGTGATGATAGAAGTGAAGCAGAGGATCCCAGTCCTGCTTGCAAACCTCCATCTCCTAAGTTCTATCATGGGCAGTCTCTGGGAAAGCCTCTGGTCCTTCAGGCTGCCCTGCATGGACAGTCTTCCATTGGGAATGGGAAAAATCAACCTAATCCCAAGTTTGCCAAATCCAATGGCCTAGAGGGTACCTGGTCTGGGGATGTCACCCAAAAAGATAGCTCAGGTGAGATGTTCTCTGACCAGGAGCCCATGCTCAGCTCCCACTTGGGTAGTCAGGGCAGCCTTAGAAAATCTACTGTGGAGCACTCCAGCAGGTCCTTTAAGGAGACCACCAATAAGTGGGTGAAGATCACAGAGAACCTCCAGCGCTATGTGAAGGCAGCCAAGAATATTAACCCCAAAGAGCAGCTCTGGGGCAAGCAGCTTGTTAGGCGGTCTGCAGGGAGAGCTCCATATCAGGAGAATGATGGGTATTGCCCAGATGTGGAGCTGAGTGATTCAGAAGCAGAAAGTGATGGTAATGATGAAAAAGTCAGGGTAAAGAGAGAGAGTTCTGATAGGGAAAATCCTCCCCATGATTCCAAACGGGATTGCCATGGTAAAAGCAAGACATATCCTGTTTCCCACAGTTCAATGCAGAGGTGATTAGAAATTCCAAGAAAACCTCCATCTTTGCCTTTGCCTCATATATTGGGGAAAACTCATACACCAAAATGACTCTAGTATATGTTGGGAGAAATTGTAGTAAAAGGGAATATAAATTTTTCCACACTAAATTGGCTTGCAGTTTTTGAACTGGTATCAAGTCTAGTTTTTACAAGCACATTATAGGGATTACATACTGTCCAAAAGTTTGGGTGGTTGTGTTTTTTTTGCCAGAAGCTAGTGAGAACAGCTGGGACCAGAGTAATTTGCTCCGTAAATACTTTGGGGCAGCATTCCAATTATATTAACACATTGATATACATACATATTAAGAGTCCATGCATTGTTAATGGATTTGCAAGAGACCATGATTATCAGACACTAAAACTACTTATCTTTCGAAGCTACAGCATGTGACTCCCGGACCTGGTGTCTGTAGGAAGTTTCTAACTCCACTGGTACCTGGAAACACTCTTCAGGGAGAGACCAGGGACCAATATTTCAGATACTGTCAAATTCACTACCCTCTTCCTTTGCTCTGCACAAGGTTGAGTTCCTTTCACAGTATCTTAACTTACCAAGTCAATACACCTAATGCTTATAAGTGTTCAGTGCCTGTTCCTAGACTTGCTTGTTGGGGACACACTCGTAACTATTTCACCCAGCTAACAAGCATAAAAAGCTAACTTGTGGATAGTGTTTACAAAAGTACTACTTCCAAGGAAAATGCTCTGATTCTCTCAGTTTAGGCGCTTGTGAAGGATCCCAGAGCCTTTCCCAAAGTGAGAACATTTCTGAGGGATTTGTATCAGGTCAGGGTTTTTGTGTTAACTGTTTTCAAATAAGTTTGGCTTAAATAAGTTTGGCTGACAGTTTTTGTATGCCTGCTTTAATGTTTATAAAAGTTTTTATTGAGGTATAATTAAAAGATAATAAAGTGCAGAGAAGTTAAATATTCTTATCTGCTTTAATTTTGAAACAGATTTTTATTGTCAAACAGAATTTGAAAGCATGTGTTTAAAAACACATGGATATAATTTAGCTTTGTACCAACTATGAGTTCAAGGCAATTTCCAAAACAAAAAGGCTGGAGCTGTTTTTCAGAAGTTGCTCATACTCTGTTCCCAAACTATCAGCCTTGATTAATCCTGGGGAAGAAGAGAATAGTTAGGTTTGTGGAGGATAAAACATACCTGCTTCCCATTTAAAGAAGAGGAAAATGTTAACAGTTTTTAAAATGTGAAGCCAACTATATATAATTCTCTGCTCACTTTTCTTAGCCTTAAATTAATGTTCTCTTTCTTCTATTTTGGGAACATGTAGTGAGACTTTTCAGACAATGAGGCCATTTTAGATTTTTAAAGTTGCTTCCTGGTGAAATATCCCAGCTGCAGTAAAGGCAGGGGCCCTTCTCTCCATAAATATGGGAAACTCAGTAGTTTTCAAAACCTCTTTCCCACTTTTGTTTCTGTAGCTGTCTTTGGTTTTATTTCTTCCTCCTTTTCTGAAAATTTCTGTATTTTGCCTCTCCTTTGGCTACACCTTCAAAATGTTTCTTTTGTGCCTGTGTACATGTGTGAACATACCATAGCATGTGTGATCAGTGTCCTGTATTTCATTTGAATACAAAGGAAAAGGCTATGGATTATCCAAATGAGGAAGAGAATTTCTCCAATTTATGCACTAGGTTTCTGTACTTTTTCTTTGCATTTCCTGGGTTAGATAATAATTTGACACCTTCATGATAATGCCATTCTAGTGGAGCTATGTTATAAACTCCTCTGTTAAAGGCCAGTACAGTAACCTGTGTCCTTTCATGCCTTTCAATTCTGAGTGAGTGGGAAGAAAAGCAAACATTGAAAAAAGTGCTTCAGCCAAATTCCATATATGTAATGCCATTGGGATAGTATTGACAAAAATAATTTCAGTCAGGGAAATATAGTTGTAATATTTTTACAGAATTTTCCTAAATAAATGAAGGAGCCTTCAGCTGTATACATTTCAACTGCCCCAAAATGTATTTGCTACATTTTGCTGTTGTTTGAAGTATTACCTCTTAACCTTCTTGTTAAATCTTTTTCATTTTGTCTTATATAGTCCAGTTTTCAAAGACAAACTGTCTTTTTTCAAATGTCACCTTTTTACCAATACTTTTTCATTAAATTATGAAAACTGCTAACT EMBV3_26271 TTCCTGAGCAAGAAGTCATCTTAGGGTACAAGGCATCCCTCTTAATTGGTCTTATGTCAG Gene GeneID:516722|ASB5:NM_001075744:17_cdna UTR3_Alt 2 NULL GeneID:516722 27 GENE ASB5 NULL ankyrin repeat and SOCS box-containing 5 EMBV3_43591 AACACTCAAAGGAAAAAATTCTACCACCCAGGGCTGAAAAAGAACTGGGAAGAGGTGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16046 CGCCTGGCACAGCTGGAACAGTGGCTGAAACGAACTTGCACTTGAAAAAAAGTGCTGACT Gene GeneID:781054|NRXN1:NM_001109805:191_cdna UTR3_Alt 2 NULL GeneID:781054 11 GENE NRXN1 NULL neurexin 1 EMBV3_01519 CACCCCCTATTGCTCCCAGACCCTTTGCAGCCACTTCATATCCAATTCCACAACCTCCAT Gene GeneID:783151|LOC783151:XM_002697317:5_cdna Constitutive 0 NULL GeneID:783151 23 GENE LOC783151 NULL similar to enterophilin-2L EMBV3_21276 ATCAGCTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAATTCGACCAGTACT Gene GeneID:541256|SOX7:XM_002689465:29_cdna Constitutive 0 NULL GeneID:541256 8 GENE SOX7 NULL SRY (sex determining region Y)-box 7 EMBV3_09375 TGCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTCCTTATTAGGCC Gene GeneID:781416|LOC781416:XM_002697670:148_cdna Constitutive 0 NULL GeneID:781416 24 GENE LOC781416 NULL similar to ribosomal protein S15a EMBV3_33309 CCCGGGATACTTTGGGTCAAATGAAGAGGATGAAACCACAAGTACGCTGAGTGTGGAGAA Gene GeneID:541228|THSD1:NM_001014967:187_cdna Constitutive 0 NULL GeneID:541228 12 GENE THSD1 NULL thrombospondin, type I, domain containing 1 EMBV3_28639 CTGGAGCTTCGGTGAAAATCTGAAGAACACGCTCTTGGGACACTTGTCAGTGATGATTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09845 AGAATGCCCTGCATCTCCACCTCATTGTCAAGCCCGTCTATCACACCCTCATCCGGACCC Gene GeneID:789790|LOC789790:XM_002696194:208_cdna Constitutive 0 NULL GeneID:789790 19 GENE LOC789790 NULL similar to RIKEN cDNA 1500005I02 EMBV3_19479 CAGAAAGAAACGTCTGGACTCTCCTGCCCAGGGCTTTGTATCTTTGCTGAAGTCAGTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41884 ATTAAATGGTGCAACTCAGGATCTCAGGAAGAGGGATACAGCCAGTACCAACGTATGCTG Gene GeneID:100296011|LOC100296011:XM_002694342:84_cdna Constitutive 0 NULL GeneID:100296011 17 GENE LOC100296011 NULL similar to Ngg1 interacting factor 3 like 1 binding protein 1 EMBV3_18057 CAGAAGACCCAAAGGAAGACAATCACGGACCTATGTCAACAACGGCTGAAAATGGGTGAC Gene BVT0102_145438 + 0 NULL GK000005.2:101840390-101871072 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193032 TCONS_00193035 TCONS_00193036 TCONS_00193034 1 XLOC_117362 Coding TCONS_00193034 XLOC_117362 Coding Coding - 5:101846612-101852706 - TSS144356 2229 1 TCONS_00193034_1 178 0.411395244504262 5 0.634990973247989 0 0 0 2.83766944669808e-13 1.55497694959735e-11 0 5.84027591040402e-28 0.000252085956333765 0.000274451959874973 0.00103343945620958 0.000239100106903098 0.000137631492029911 0.0040650437854901 0.0074888970800541 0.00619256967296457 2.07784334561632e-21 0 0 0 0 0 0 9.21245876649044e-14 6.37379075862608e-09 0 0 0 3.90309846166908e-05 1.89889132915777e-10 6.46781180905549e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 3e-132 477 91.64 0.145805293853746 NM_001145465.1 NANOGNB Homo sapiens NANOG neighbor homeobox (NANOGNB), mRNA. 4e-29 134 70.55 0.132346343651862 TCONS_00193034_1 sp|Q7Z5D8|NANGN_HUMAN NANGN_HUMAN NANOG neighbor homeobox; 1e-16 75.5 42.86 0.601123595505618 1 noncoding 0 0 1 1 -0.0918064428477757 0.56748800168727 0.0174478942511135 0.754076449119692 GAGTTTTAAGTTTGACTTATGAGTATTGAGACATCCAAGCAGAGATACAGAGCTGGAACTTTGGATATACAAGCCTGGAGATTCAAATCCTAACCTAATCACCGTCTGGGTGGTAACGATGTCATTATGATTAGATTTCCGTGCTTGGACAGTATATATAGGAACTCAGAGCTCTAGAGACATAGACTTGAGAGTTGCAGTAGGTCAACAGTCTGGAAGACAAGGAGAGAAAAAGGAAGAAGTAAAGAAACTTGAGCATCACTGACATAAACAGAATCTCTGGAGAGGATTCGGTCCTGAGAGCCCTCAGAGAAAAGCCTTTCAAGATGGACAGAGCTCCAAATACTCCAAGTCAATCTGAGTATTTGATTTCTGAAAGTCAAGGACAACATCTAGTACAGAAGACCCAAAGGAAGACAATCACGGACCTATGTCAACAACGGCTGAAAATGGGTGACAACTTCACAAAATCAGAAAGCTGGAATTCTGGTGCACAGAAACAACCAGTGATGCCCTGTGATCAAAATCATCTTGAAGTTGAAAGGAAGACAAAGAAGAGAAAGAGAGGAGGAGGAGAAAAGGAAGAAGTCATAGAAGAGAACTTGGAAAAGGAGGAGGACGAGAAAGAAAAGAAAAATAAGAAACGATACCAGAAGAAAAAATTTGTCAGCAGACCCCTCATGGACACTCTCTGGGCAATGTTTAAATTTAAAAAAAATCCCACATTTCAGGATATTTCATCACTTGCACTTGAATTTAGCATGACAGCGACTCAGATAAACCGATGGTTTTGTAAAAAGAGGAAGATATACAAAAAAGAAATACACTGGAGAGCATATAAAAACAGAAGAGACCCAAAATGAGGAAATTGAATTGTTAGGAAAGAATGTGAGGACTTTCTTGATGGTGCAGTGGATAAGAACCCACCTGCCCAATGCAGGGGAAAGGGATCCATCGCTGGTCTGGGAGGATTCCACATGCCAAGGAGCAACTAAGCTGGTGAGCCACAACTACTGAGCCAGGGCTCTAGAGCCTGACAGTTGCAACTACTGAGCCCGGGCACCACAAGGACTGAAGCCTGCCCACCTTAGAGCCAGTACACCACAACCACTGAGCATGCGTGCTGCCACCACGGAAGTCTGTGGGCCTGGAGCTGTGCCCTGCAACAAGAGAAGCCACTGCGATAAGAAGCCCAGGCACAACTAGAGAGCAGCCCTGCTCTCCAAACCCAGGGAAAGCCTGCCGGCAGCACTGAAGACCCAGTCCAATCGAAAACAATTAAACTTTTGAATTAAAAATTAAAAAATGTGATTTCATCAACAAGTACCAGTTCCTAAATGTCTAAGCCTGAATTTGTAATTTCATATTTCTGGTAGAAATGCTCTGTGGTGTGTTTTTTTTTTTTTTTTTGCTCTGTGTTTTAAATTTTACTTGATCACAAGTTCGAACAAAATTTCCCAGAACCTTCCATTAACCCTCAAGCTCTAAATCACAAATTCTAATAGTTTTCTCAGGTACAGATTTAAATCTAACTTCTGGACACTGCTTTGTCAACAAATATATTTAGAGAAAAACTGGAGGAAGGTGAGAAAAATTATCTGATAGAAAACAAACTTATAGTTACCAAATGGTAAAGAGGGTGGGAGAGGGATAAAAGGAGCTTGGAATTAGCAGATGCAAACTACTAGAAATGAAATGAATAAATGAGAAGGTCCTACTGTAGAGCACAGGGAACTATATTATATTCAGTATTATAGGCTATATTCAGTCACCTATAATAAACCATAGTAGAAAAGAGTATGAAAAAGTATATATATATATATAAACATATTCAGCTATATAGCTATATGATTCAGCTATACATATATATACACACACATATGTATAACTGAATCACTTTGCTGCTGGGCTGGAGGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGTTATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAACTAAAGAGCCTCTTGATGAAAGAGGAGAGTGAAAAAGTTGGCTTGAGGCTCAACACTCAGAAAACTAAGATCATGGCATCCGGTCCCATCACTTTATGGCAAATAGATGGGGAAACAGTGGAAACAGTGTAAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGAC TCONS_00193037 s 5' 18364 TCONS_00193037 s 5' 24457 EMBV3_39590 AGCTCGTCTTGCTGTGGAAGTTAGAGAGGTAGCCAGTGCAACCTGACCAGCTCACCCACA Gene GeneID:511776|RAB9A:NM_001075538:17_cdna Constitutive 0 NULL GeneID:511776 X GENE RAB9A MGC140656 RAB9A, member RAS oncogene family EMBV3_35963 CCGCCCAGAGCACACTGTTGACCTTGTTTGTCTAGGAAGTGATTCGGGAAAGTTTCAGGA Gene GeneID:617456|HJURP:XM_002686557:44_cdna Constitutive 2 NULL GeneID:617456 3 GENE HJURP NULL Holliday junction recognition protein EMBV3_28535 GATCAGCTTGATCAGATTAGCTTGCTGGTATGTGGTGACCCAAATCTGACTGCTGTCAGC Gene BVV0102_119716 + 0 NULL GK000013.2:62755965-62762883 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31341 TGAATTCACCTGCGAAACCTGCGGCAAGTCCTTTAAGAGGAAGAACCACCTGGAGGTACA Gene GeneID:516232|ZNF653:XM_002688848:180_cdna Constitutive 0 NULL GeneID:516232 7 GENE ZNF653 NULL zinc finger protein 653 EMBV3_04448 GTAGTGGGTTGCTAACAAGTAACAACGAGAAGAGACTGAACAACCAGTTTCACTTTCTAT Gene BVT0102_066464 - 1 EMBV3_06473 GK000019.2:23527010-23559325 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092773 TCONS_00092776 TCONS_00092774 TCONS_00092778 TCONS_00092771 TCONS_00092775 TCONS_00092777 1 XLOC_056976 Coding TCONS_00092773 XLOC_056976 Coding Coding RPA1 19:23476633-23529352 = TSS69732 5206 1 TCONS_00092773_2 616 17 0.901570621040252 1.65464733435333e-07 0.000167148819934803 6.17909437160564e-09 2.35875779746401e-08 0.000911764558110215 0.000570672039685132 0.00169726656870269 9.64596054112786e-05 0.0003601883916134 1.71989289468926e-05 6.68728018002648e-06 5.97237583170652e-05 0.000176506265401197 0.000601288082885991 0.000108286375940622 3.30559598436826e-06 8.04873191473582e-09 3.77184445613514e-08 0.0017570064003999 0.000679881081994468 0.000878974540335026 1.4878740807532e-07 4.49756084893716e-11 2.194350080067e-12 0.000329868888907498 0.000778995701956109 4.42251627277148e-08 0.000120657127917505 7.72571234427545e-09 7.2724923455349e-06 NM_001075176.1 RPA1 Bos taurus replication protein A1, 70kDa (RPA1), mRNA. 0.0 5164 100.00 0.549750288129082 NM_002945.3 RPA1 Homo sapiens replication protein A1, 70kDa (RPA1), mRNA. 0.0 3795 79.57 0.831732616212063 TCONS_00092773_2 sp|P27694|RFA1_HUMAN RFA1_HUMAN Replication protein A 70 kDa DNA-binding subunit; 0.0 1152 90.10 0.998376623376623 3 coding 0 0 0 0 -0.0858705970882149 0.619658251920786 -0.21419459044071 0.0318560963719211 CTTGGAGCGCGCGGGTCCCCGGGAGTAAAGCCAGGCTTGTGTTGGGGGAGCCGGAGCGCGGGAGTTGTTGCGGCGGAACCATGGTGGGCCACCTGAGCGAGGGGGCCATTGCGGCCATCATGCAACAGGGAGATACATCTATAAAACCCATCCTCCAAGTCATTAACATCCGTCCCATTACTACAGGGAATAGTCCACCCCGTTATCGACTGCTTATGAGTGATGGATTGAATACTCTATCTTCATTCATGTTGGCAACACAGCTGAACCCTCTTGTTGAGGAAGAGCGATTGTCTAGCAACTGTATTTGCCAGATTAACCGATTTATTGTGAACACCCTGAAAGATGGAAGGAGAGTGGTTATTTTGATGGAGTTAGAAGTTTTGAAATCAGCTGAAGCAGTTGGATCAAAGATTGGCAACCCAGTGCCTTATAATGAAGGACACGGACAGCAGCCAGTAGTTCCTCCTCCTGTCTCAGCAACCAGTCCACCAACCAGCAGGCCCCAGCAACAGAATGGGAGCCCAGGAATGGCTTCCACTGCATCTAAGGCTTTTGGTGCCTCAAAGACATTTGGAAAAGCTGGTGGTACCAGCCAAGTGAACAGCTCTGGGGGAACACAGGCCAAAGTGGTACCCATTGCCAGCCTCACCCCGTACCAATCCAAGTGGACTATCTGTGCTCGTGTCACCAACAAAAGTCAGATCCGTACCTGGAGCAACTCCCGAGGGGAAGGGAAGCTTTTCTCCATAGAACTGGTTGATGAGAGTGGTGAAATCAGAGCGACTGCTTTCAATGAGCAAGCGGACAAGTTTTTCCCCCTTATTGACGTGAACAAGGTCTATTATTTCTCTAAAGGCACCCTGAAGATCGCCAACAAACAGTTCACAGCCGTCAAAAATGACTACGAGATGACCTTCAACAACGAGACTTCTGTCATGCCCTGTGAAGACGGTCATCACTTACCCACAGTTCAGTTTGATTTCACAGGGATTGGCGACCTGGAGAGCAAATCTAAGGACTCGCTTGTAGACATAATCGGGATCTGCAAGAACTATGAAGATGTCACAAAAATCATAGTGAAGTCTAACAACAGAGAAGTCTCGAAGAGAAATATCTATCTGATGGATATGTCAGGGAAAGTGGTGAACGCTACCCTGTGGGGAGACGATGCTGATAAATTTGATGGCTCTAGACAACCCGTGATGGCCATCAAAGGAGCCAGAGTTTCTGATTTTGGTGGACGGAGCCTCTCTGTCCTATCTTCAAGCACCATCATTGTGAACCCTGACATCCCAGAGGCCTATAAGCTTCGTGGATGGTTTGACTCAGAAGGACAAGCCTTAGATGGCATTTCCATCTCTGATCTAAAGAGTGGAGGAGCAGGTGGGAGCAATACCAACTGGAAAACATTATATGAGGTCAAGTCGGAGAACCTGGGCCAAGGTGACAAGCCTGACTATTTTAGCTCTGTGGCAACTGTGGTGTATCTTCGCAAAGAGAACTGTATGTACCAGGCCTGCCCAACTCAGGATTGTAACAAGAAAGTGATCGACCAACAGAACGGATTGTACCGCTGCGAGAAGTGTGACAGTGAATTCCCCAATTTCAAGTACCGCATGATCCTGTCAGTCAATATTGCCGATTTTCAAGAGAATCAGTGGGTCACATGTTTCCAGGAGTCTGCAGAGGCCATCCTTGGACAAAGCACTGCTTATCTTGGGGAATTAAAAGAGAAGAACGAGCAAGCGTTTGAGGAAGTTTTCCAGAATGCCAACTTTCGATCTTTTACGTTCAGGATCAGGGTCAAACTGGAGACCTACAATGATGAGTCTCGAATTAAGGCCACGGTGGTGGACGTGAAGCCTGTGGACTACAGAGAATACGGCAGAAGGCTGGTCATGAACATCAGGAGGAACGCGGCGATGTGAGAGGATCGTGCCTATGGGGCAGGAGCTTGTGGATAGAGGGCTGAAGCAACCACCCCCCCCACGCCACCTCCGACCTCCACCCGCACCACCATTCCCGCCCTGACTGACGGCGGTGCAGAGCGCCCCTCTACCATGGACTAAGCCATCACCTCTCGTCACACCTGGGAACCCACTGGCAGCAAAGGCACACAGTGGAATACGCCTAAGTGAAAAGGGAAATACGCTTGTGGGGCTGTGGTATAAACCGTGTCAGACCTCGGGGTCAGCTGCGCGGACCGTAGTACCACTCACTCCCTGTCTTTAGGTTTTTGTCAGTTTTACTAAGAGCTCATTATTTTCAACCAGGAATTATGTCACAAGTAATTGACCCTCAATCTGTAGACAGTGAAATAAATTATGTAAGTCGGGTTCCTGCTTCTCCAGTGCTGACACCTTCTCAGCTCGGGTCCCTTCCCAAGGGGGAGCGCTGAGAAGTGGTTTTGTGGAGGAACTTGAGTGTTTTAGGAAGCCCGTCTTCCTCGATTTCAAAGGCTCCCTTTCTAGAGGGGCCACACAGTTGTTAATGCCTGGATTGGCAATAGGGTAGAATTATTAATCAAAGTCATATCTTTTATATCTGAAGAATATCCTTCCTTCAGGGTTTAATAGACTGAGTCAGATGGGTCTGATATTAATCAAAATGGTCTCTTCTGAGGAAGGCTGATAAGCATTGACTTGCTGTCCCCTAGAGACATCCCGGCAACTACAAAGCATCGCTTTCGTCTCCCCTTCAATTAATGTTGCATTTCTGTTGGTACGCCTTTTCTACCTGTACATGTTTCTTGAATTTGTATGTTTTCTTTTCTTGATTAAAGCTGTATTAAATAGAAGGGATTCTGAAGGGAGAAGCCCTTTGTTGCCATTGCCTTGTTTAATAAACAGTTTATTCTCTGCTTATGAATCCCACTTTCTTTGAATGCAAAGTGTTCTTGTAACTGGAAAGCAATTAATTAGCCTTCATAATAAATGTTCACTTGGGGAAGATGTTAACTCATTACAAACTCGAAGATTAGTCCAAAGCATAGAGATCATTCTTCCTAATGTCTGCAACCTTGAAATGCATCTTTAAAAGAATGAAAACACCAAAAACAAAAAGCCATTGTGCCCTGGAATGCTGATGATCCGGCACTTTGGGATTTTATTGATGTTTACACAGCGGTCTTAACACCAACCAGGCTTTGAAATGTGAACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTACTGGGCTTTTCAGTCGGCAAGAACATGCTTGCTCTGTGTGTTCCTAATCATATTAATTATCTATCCGGTCCGTGCAGCCCCTCATCTGGCGTTCGCAGCACACCTCTGCAAGCGTCCAGGCGGCATTGCCGTCTTCCCGTGGTGCCGGGCCCTGGTTTTTAATGTGGGCAAGCGCGGCACATGGAGACCCTTGCTGGGAGTGAGCACATCCTGCCTGTGTCATCCTTAGCCTTCTTCTTCCGGGAGGAACCAGCTGGCGTCAGGCAGGATGACTTCCATGGCTCAGAACCTAGGATGGCCTTCTCTCAGGCCCTCTAATTGTCTGGACACGGTCAGGATAGCCACTGGGCCACACTTGATTCTCCGGCCAAGGCCTCAGCGATTTTTTACGGAAGCTCCTTTCTGTCTGACCTTGCTCGTAAAGCGCTGACTAGAAAATTACAGTCTTCAGTGCTATGGTGGATTGACAAATTGTGGGTTGGAAGTGGCAATCTAGCTTTCAGCCTGGTAACCAGTCTTTTATATCTACGGCTCCCAGCATCCCCTCCTCTCCCCATCACGGCTCCCACCCCACGAACAGCACTGACCGGCAGCGTGACCCCGACGCGTCTCCTGGAACATGGTACCAGCTGCCATGCCTTCTCCACGACCATGCGGTGACACCAGCACGTCTCCGCGGATGTGATTAGAAGCCCACAGAGGGATGCTCTGAGGTGGGGCGGCTCCCTCGAGGGGGCATGTAGAGCAGATTCCCCACTAAAAAGCAGATCACCGGCAGAGGAGCATCAGAAATTGGCTCCACTGTTTGGCTTTTAAGAGCTTCAGGTCCCTGAGGGTCACCTAAATAGATTCTGGCCCACAGTTCTTAAAATTCTCTTGGAGATAGTTTAACCTCGAAAGGCTGTTCGTGTTCTATTTCTCATCTTTCACTTAGAGATCAATGTTTATTTTGTGTACACCATGACATCAGCGTTAGACAATTAGGGAAAAATCTAATCATTTTGTCTTTATTTTAAATGGCTCTTGGATCCCTTCCAGTCTCATTGTGATGGAGGCAGTGGGGGGGGAAAGGGTAATAATCTGATTTCTGTCCATATTTTCTGTGTTTTATGCTTTCCATTAAGGCCTTGCTAATCTCTGGTGTGCTCATTCTGACTTTTTGAACTTCAGGATCAAAAACTTCCCCTCCCCCACGTTCTTTCCTGAGTGGCCCATCTTCGAAAAGTATAAATAATATCGATTATGGCGTTTAATACCCTAATGAAACCCATAGTTATTGACTACGTAATTAATACACTGTCTAAAAGTGAAATTTGGTAGCCCAGTATATAAAGGTTTAGATATTGACTTGTGTTTCTTTGGCAATATGCCTTCTCGGATTTTATTTATAGAAAGTGAAACTGGTTGTTCAGTCTCTTCTCGTTGTTACTTGTTAGCAACCCACTACTCCCCCCCACCCCTAGTAAATTGATGATTTCCTTATCTCAAAGAGGATGTCCCCCACCCCCAGGGCTCCCACCCACCCTCTTTTATGTGGTTTGTTAGCTCATAGTGTTATAATCCACTCTGCTGCTAGAGCTATGGCTTTCAGAAACACTTTTAGGAATAATCTCTTTTTTTCCCTCTCAAAAAAGACTAGATGTTTAATTTTCATTGTTTTGAAAAAGAAGCCAACTGAGTATGTTTTATTATTAAGCTGATAAGTTTTGTTAATGTCAATTAAAAAAAAAAGAATGGGTACTATTTGAACCATTGATTATTTCTTAAGTAATCCATGTTCATTGTAGAAAAAATAACCTGCAGACAAGAAAAAACAAAATTGTCCTTAATCCCGCCTGTCAGCAATAATTGCTTATATAGCTGACTACTTTTCTCTCTGCTTTTATGTGTGTAATTATAGTTTTAACTTAAAAATGGGATTATATTATGCATATTATTCTGTAACACTTTGCTCCTAGCACTAAAGAATGGACCTCTTTCCTGTTTCAATAAAAATAGATCTGCATTAT EMBV3_19701 AGGACCTTGTCCTGCAGAACTCGGCCGCAGGAACCAAATACCAGGCCATGCTGAGTGTGG Variant GeneID:507327|P4HA2:NM_001034293:40_cdna 596^733 2 EMBV3_37112 GeneID:507327 7 GENE P4HA2 MGC127031 prolyl 4-hydroxylase, alpha polypeptide II EMBV3_42686 GGATAAACAAGGCTATTATTTTATCCATCAATTCCACTCTATGTCTATATTTCCTAGGAG Gene BVV0102_411508 - 0 NULL GK000002.2:31912201-32850181 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20980 CTTCCCATCACTCATTCTCCTTCTGGAAGCTATCCCATTCTTGTCTGGGTTTGCGTGACC Gene BVT0102_325003 + 0 NULL GK000007.2:98199485-98444978 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00738 AAAGGTTACACCCAGCTCTGCGACTGGTGGAGTGTCGGCGTGATTCTCTTTGAGATGCTA Gene GeneID:508208|LATS2:XM_002691865:176_cdna UTR3_Alt 2 NULL GeneID:508208 12 GENE LATS2 NULL LATS, large tumor suppressor, homolog 2 (Drosophila) EMBV3_18833 TCCTCGAAGGAAGCGTGAGGATGAAGAGTCAGGAGGGGAGAAGAAGCGCATGACTTTTGT Gene GeneID:100141235|LOC100141235:XM_002691066:502_cdna Constitutive 3 NULL GeneID:100141235 10 GENE LOC100141235 NULL similar to Chromosome 14 open reading frame 50 EMBV3_41267 CCGCGCTCTGCGACCGCCGCGGCGAACATGGGCACCAGAACTAGCTCCTCTGAAGAGTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28698 GCTCCTAGCACTTTCATGCAGAATCCTGTTCCCAACCATTCTGGTATCCCTCTTCTGACC Gene GeneID:510454|LOC510454:XR_083598:22_cdna Constitutive 0 NULL GeneID:510454 2 PSEUDO LOC510454 NULL similar to sorting nexin 6 EMBV3_30186 CTTCCTGAGAGCCATCCTTGCAGAGTTCCGTCGATCAGGACTGGAGGAAGCAACATTTCA Gene GeneID:513523|ORC1L:NM_001014918:49_cdna Constitutive 1 NULL GeneID:513523 3 GENE ORC1L NULL origin recognition complex, subunit 1-like (yeast) EMBV3_01241 TGGTGCTAAGTGCCATCAGGAGCCCCAGGAGAGCTCAGGACACATCCTCTTTGGACCTGA Gene GeneID:534944|PEX6:XM_002697245:439_cdna Constitutive 0 NULL GeneID:534944 23 GENE PEX6 NULL peroxisomal biogenesis factor 6 EMBV3_11759 AAGAGATCAATCTCACCAGAGGACCGTCAGGTCAACGGCCAAGACCTAAAGAACCTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28983 GTAATTCATATTACAAGCTTACACGTCAGCAAAGGCTCCTGAATGAGTAGCAGAGCAAGC Gene GeneID:782635|MON2:XM_002687551:558_cdna Constitutive 0 NULL GeneID:782635 5 GENE MON2 NULL MON2 homolog (S. cerevisiae) EMBV3_09387 AGTGACGGCCTCGCTAAAGATGCAGACCCCATGAAGAGGAAGCCTTGGACATCTCTGTCC Gene GeneID:518121|CDC42BPG:NM_001102502:30_cdna UTR3_Alt 2 NULL GeneID:518121 29 GENE CDC42BPG MGC155045 CDC42 binding protein kinase gamma (DMPK-like) EMBV3_13761 CTAAGAAACCACAGTACGACATTTGGGGCAAAACCGTGAACCTGGCGAGTCGGATGGACA Gene GeneID:535017|ADCY8:XM_002692605:35_cdna Constitutive 0 NULL GeneID:535017 14 GENE ADCY8 NULL adenylate cyclase 8 (brain) EMBV3_37230 TACTCCGACCTAGTCTGCTACGAGGACCTGGGTGCCAATACAACGAAATGGCGGATGATA Gene GeneID:100125580|CXCR1:NM_001105038:2_cdna Constitutive 0 NULL GeneID:100125580 2 GENE CXCR1 IL8RA chemokine (C-X-C motif) receptor 1 EMBV3_42255 GACCGAGATAGGAGTTAGACAGTTGAAAGGGGGGATGTGAGAGGTGTTGGAATGCATGAC Gene GeneID:533374|GGCT:NM_001037610:19_cdna Constitutive 1 NULL GeneID:533374 4 GENE GGCT C7orf24 MGC133989 gamma-glutamyl cyclotransferase EMBV3_41725 GGGAGCTGGAACAGATGATCATACCCTCATCAGAGTTGTGGTTTCCAGAAGTGAGATTGA Gene GeneID:281626|ANXA5:NM_001040477:34_cdna UTR3_Alt 2 NULL GeneID:281626 6 GENE ANXA5 MGC126971 annexin A5 EMBV3_02930 GTTAATAACTGCCAACACATCGTTATAATTCTGTCATGTCCTGTTAGATGACCACCTCGT Gene BVV0102_346816 + 1 EMBV3_11203 GK000025.2:36335484-36347293 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02407 GGCATCGCAAAGAGAAGAAGGAGCTGCAAGATCGATTCTGTTGCTGTTAATATTTCAAAC Variant GeneID:617064|OTUD6B:XM_002692846:235_cdna 138^289 2 EMBV3_34502 GeneID:617064 14 GENE OTUD6B NULL OTU domain containing 6B EMBV3_31894 CTGAGGAGGCTGGGGATGTGATTTTTGATTATGGGGAGCAGGATACTTATAACAAGGCCA Gene GeneID:517621|MGC139228:NM_001102042:119_cdna Constitutive 0 NULL GeneID:517621 11 GENE MGC139228 NULL hypothetical LOC517621 EMBV3_09476 ACTGACAGCTTTGGGTGGACCAGTGATGAGGAAGATTTCCTAGATCTAACAGTAGCAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12900 TGTGGGAAACAGAGTCCAGTTTAAGGAACACAAAGCAGCCTTCCTGGCTGTAAACCCTAG Gene GeneID:327694|EIF2S1:NM_175813:41_cdna Constitutive 0 NULL GeneID:327694 10 GENE EIF2S1 MGC128972 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa EMBV3_30165 AGCCAGACACAGGCAGAGCAAGCTGCTCAGAAATTAAGGGTGCTACAGAGGAAGCTTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00925 CCAATTGAGGGGAGACCTTGAAACTCTATGTTAGGAGTAATGCTGACTAAGCGCACTTTG Gene GeneID:515306|PIGH:NM_001038116:115_cdna Constitutive 0 NULL GeneID:515306 10 GENE PIGH MGC134190 phosphatidylinositol glycan anchor biosynthesis, class H EMBV3_38053 CTCACAGGAAGTGTGGCTGAGGAGACTTTGGGATGCACGTTTTTTATATCGCACAGAGCG Gene GeneID:618487|LOC618487:XM_002697856:351_cdna Constitutive 0 NULL GeneID:618487 25 GENE LOC618487 NULL hypothetical LOC618487 EMBV3_17014 TCTCCAGGAAGGACGTGAACAGTGTGATGGCTCTGAATGTGAGCATGCTGGCAACTTACT Gene GeneID:786701|MUC4:XM_002684819:247_cdna Constitutive 0 NULL GeneID:786701 1 GENE MUC4 NULL mucin 4, cell surface associated EMBV3_15953 TTCCCTCAGGCTCTGTGCTTCATGATGGGGTCCAGTCCTCCGAGATCTTACAGTCTTAGA Gene BVT0102_042213 + 0 NULL GK000004.2:100626569-101019787 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19862 GACTTGCCTAAGAGGCCCAGGCCCAGAACGGAGATGTTCCTGCTCATATATTTGGCATGA Variant GeneID:524184|ECD:NM_001046271:338_cdna 53^261 1 EMBV3_21546 GeneID:524184 28 GENE ECD MGC137386 ecdysoneless homolog (Drosophila) EMBV3_36382 ACTGTGACCTTCGTGTGGAAAGTGTCAGCCATCACAGTGGTCAGCTGCCTCCCTCTCTAT Gene GeneID:510301|ATP9B:NM_001080255:5_cdna Constitutive 1 NULL GeneID:510301 24 GENE ATP9B MGC142821 ATPase, class II, type 9B EMBV3_25188 AAACCACTTCAGACTAAGCAGATAAAACAACTAAGCAAACCCACTCCATGGACTACTAAC Gene BVT0101_008867 + 0 NULL GK000008.2:66066161-66103532 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15382 AGTCCTATCGAATGAAGCTTTGAGGAGGCCCCGACGAATCCTGGCACTTTGCTGATACGT Gene GeneID:512679|KIAA1549:NM_001080267:643_cdna Constitutive 0 NULL GeneID:512679 4 GENE KIAA1549 NULL hypothetical protein LOC512679 EMBV3_12040 GAAGACGGTGTTCGACCCCCACCGGCCGTTTGCCATAGACATGGCGGGATTTGCAGTCAA Gene GeneID:541596|B3GAT1:NM_001014393:17_cdna Constitutive 0 NULL GeneID:541596 15 GENE B3GAT1 glcat-p beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) EMBV3_30687 TGGCTCTGTGCCCTATGTTGTAAAGTACATCGTGTGGCCTATCTTACACCCTGTAACCTG Gene BVT0102_058917 - 1 EMBV3_40381 GK000016.2:70890747-70902205 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17687 GCTGAGGATGAGTCCAGACGCCATGAATGCCCTTTTTAAGCCAACCATCGACAGCATCAT Gene GeneID:540050|HSPA12A:XM_002698534:198_cdna UTR3_Alt 2 NULL GeneID:540050 26 GENE HSPA12A NULL heat shock 70kDa protein 12A EMBV3_25818 TGTCATCTGGATCCCAGAGAAGCATGTGAGAAACACAAGTTGGAACTTCCAGGGATAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41386 CCTGCTCATGGCTGGGGTTTACCTGGTGAGTATAGCAGAGACGTTGATACACATGACATT Gene GeneID:511865|LOC511865:XM_002693618:144_cdna Constitutive 0 NULL GeneID:511865 15 GENE LOC511865 NULL similar to olfactory receptor, family 5, subfamily W, member 2 EMBV3_04626 CTACCAGACCTTGAATACCCTGACCTTTGGGGTCTCTTCCGTTTCCATAATCTCTCTGGG Gene BVV0102_116101 + 1 EMBV3_21288 GK000018.2:53380057-53383532 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084034 1 XLOC_051434 Coding TCONS_00084034 XLOC_051434 Coding Coding MARK4 18:53325732-53382652 = TSS63028 4645 1 TCONS_00084034_4 333 0.181700753498385 14 0.918638767371177 0.000734180867507959 0.000917754594212463 0.000485543549885213 0.000610171836639475 0.000732782110320146 0.000424996161245785 0.000913376832877149 0.000767650574613734 0.00171031001769594 0.000161698852214096 1.62271830542195e-06 5.23337227275944e-05 0.000260980386316307 0.000949817576934942 0.000436397932314151 9.24447291706214e-43 6.37131504861209e-34 7.13777864901617e-17 0.00079968051230286 0.00123495425444273 0.000541371809125024 4.73673504215767e-149 1.7755078658197e-14 2.65490074464992e-27 0.000491097686235722 0.000768029714711984 0.000545639592487802 6.06273393840615e-05 8.10369782346811e-05 3.71583183178828e-21 NM_001035359.1 MARK4 Bos taurus MAP/microtubule affinity-regulating kinase 4 (MARK4), 0.0 2836 99.75 0.340365984930032 NM_001199867.1 MARK4 Homo sapiens MAP/microtubule affinity-regulating kinase 4 (MARK4), 0.0 2024 95.70 0.270398277717976 TCONS_00084034_4 sp|Q96L34|MARK4_HUMAN MARK4_HUMAN MAP/microtubule affinity-regulating kinase 4; 0.0 681 98.79 0.987987987987988 4 coding 0 0 0 0 0.0276573606809303 0.794975098911959 -0.00274096321285588 0.969374744634855 AACGGTGCCCGGGAGCCAGGAGAGGAGAGGAGGCTTGTTGAGAGGATCCAGGAACACACTGTGCCCAGAGGGACGGCAGGGAGCTAGGAGACAGTGGGTGAGGAGAACCTACCCCTAGGAGTGGGCAAAGGGCATGAGGAAGCCCCTGCAGGAGGAAGAGCACAGCACAGGTCAGGCGAGTGAGGAAGTGGGAGAGGTGGGAAGAGGCCAGCACAGGACGGGCTGCTCGAGGCAGTGTCCCAGTGGAGAAGGGTGAGCAGATGAGCCCCCGGGTCTGAGGGAGCATCAGATTCCAGACTGTCAGACTTGGAGGAAAAGGATCCAGGACCAGGCAGACAGCGAGCAAATGGATGTAGGCGACAAGGCACCTGAATGATGGTGTTGTGTTGGAATTGCTGTTAATGGTTCAAGAGTGAATTGCCAGCTTGGTGGCCCCAGAGTTGAGGATGCTTGAGATACGAAGCCCAGCATGGCACCCTGGGCAGTGGCCGCTCCTCGGACAAGGGCCCGTCCTGGTCCAGCCGCTCCCTGGGCGCCCGCTGCCGGAACTCCATCGCCTCCTGTCCTGAGGAGCAGCCCCACGTAGGCAACTACCGCCTGCTGAGGACCATTGGGAAAGGCAACTTTGCCAAAGTCAAGCTGGCCCGCCACATCCTTACTGGCCGGGAGGTCGCCATCAAGATCATCGACAAAACCCAGCTGAACCCCAGCAGCCTGCAAAAGCTGTTCCGAGAAGTCCGTATCATGAAGGGCCTAAACCACCCCAACATCGTGAAGCTCTTCGAGGTGATTGAGACGGAGAAGACGCTGTACCTGGTGATGGAATATGCAAGTGCTGGAGAAGTGTTTGACTACCTCGTGTCGCACGGCCGCATGAAGGAGAAGGAGGCTCGAGCCAAGTTCCGACAGATCGTATCGGCTGTGCACTACTGTCACCAGAAAAACATTGTCCACAGGGACCTGAAGGCCGAGAACCTCCTGCTGGACGCCGAGGCCAACATCAAGATTGCCGACTTTGGCTTCAGCAACGAGTTCACGCTGGGCTCGAAGCTGGACACATTCTGCGGGAGCCCCCCGTACGCCGCCCCGGAGCTGTTCCAGGGCAAGAAGTACGACGGGCCGGAAGTGGACATCTGGAGCCTCGGCGTCATCCTGTACACGCTCGTCAGCGGCTCCCTGCCCTTCGACGGGCACAACCTCAAGGAGCTGCGGGAGCGAGTCCTCAGAGGGAAGTACCGGGTCCCTTTCTACATGTCAACAGACTGTGAGAGCATCCTGCGGAGATTTTTGGTGCTGAACCCAGCTAAACGCTGTACTCTCGAGCAAATCATGAAAGACAAATGGATCAACATCGGCTATGAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAGGAGGACTTCGGGGACACCAAGCGAATAGAGGTGATGGTGGGTATGGGCTACACACGGGAAGAAATCAAAGAGGCCTTGACCAGCCAGAAGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGGGTGGGGACCGGGGTGCCCCGGGGCTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAATGGAACAAGCTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAACGGAGTTCCTCCTCCACCTACCACCGCCAGCGCAGGCATAGCGACTTCTGTGGCCCATCCCCCACACCCCTGCACCCCAAGCTCCCCCCTCCCCCACGCTGACCCTGGGGTTTTCCTTCCCTGCCCTCACCTGCAAGTGAGATGAAGAGGTGTGTGACTTTGGGCTAGTGGTTTCTCCTTTCTGAGCCTCGATTTTCTCATCTGCAGAATGGGAGCAGTGGGGGTGTGGGGTCAAGGGTGATTGTGGAAGAGGGCAGGAAGGGACTCGGCCTCATCCACGAGGCCCCAGTTCCTATATCAGACCCCTGTTCATCCACTCACATACCCACCCACATGATATACTGGACTCTAAGCCACTTCTTACTCCAGTAGTACATTTACTCAATAAACAGTCATTGACCGGTGCCTACTCCATCCAGGCCCAGTGCTGGAAACGGAGATGCAGGGAGCCCCTGTCTATGGGGGACATGGGTTCTGATAGACACTAGAGAAACCATTGCTTTTGGAGGGGGTTGGGCTAGAAGAGAAAGTGAGAGGGTTTGGGGAAGGCACTCCAGAAGAACTGATGCTGGAGTTGGGCTCTGAAGGATGAGTAGGAGTTGGCCAGGTGTTGGACATCCCCTGGGCAGAAGCCTGGAAGTGGGAATGCATGGTATAGCTCAGAGAACTGTGGGTAATTTCAGTATGGCTGCTGTGTTGGGGGCTGGGTGGAAAATTAGCAAGAGGAATGCTGTATTAGGACTAATAATCCATCTACATTTAAGCAAAAAGGTATTTGCTCATTTCATAGGCCAGGGGTGCCTGACTAGGTACAGCTGGATTCAGGCCACAGGCTGGCTCATCTCTGCTTTTTTCAGTGTAAGTTTCATTCTAGTAGTTTCATCCAATAGGTGCCTGGTGTCAACGGTGACACCAGCAGTCCAAGCTTTTATCCTTCCCGTTTAGGGGCTATAGCAGAGTTCCTGATTGCCAACTTCAAGCAAAAGTCCCAAGACAGGCTCTCATTGGCCCGGATAAGTCATGTGATCACCCCAAACCAGTCACTGTGACTCTGGAGTGGCCTGTACCTAGAGCTGGACTTAGAGGGGTTCCTCAAAGAAAAGTCAAGGTGTCACGATAAGGGAAGTAGAAGCATGATAGATGTAAGCAGAAAAGGGCTGTCCAGCGCAGGAGGGCAGGTACTTCACCAGAGCCTTGTGGGCCTAAGCGCGCAGTCTGGGCTTTTATCCAAGGGCACTGGGAGCCACGGAGGGTTGCTTGCAGGAAAGAAGCTTAGTTAAACTGTCTCACTTGCCTGTGAGGCAGTTGTCATGGTAGGGTCAACTGTTGTATTCTTCATCGGACAGGAAAGTCAAACGAGAACTGAAGGGGGCTAAAAATTAAGAGTGGCTGGCTCAAGGGAAAAAAAAAAGGTGGTCAGTGTTGAAAAATTCAGGGTCTGAGGGAGAATCATAATCCTATCATGAGTTAGGCCATAACAGGACTGCCGAAAGGTGCTTGTAGTTGAAAGGGTAGAAAAAAAGGTGAGGCAGGGGAACCAACCCTGTCACAAAAACCTCAATTCCTGAGTTCTTCCCTGGTTCCCAGCCCTAGGCTGGGGACACAGTGGTGGCCAAGACAACCCCACCTCTGCCCTCTTAGGGTTCACAGTCCAGGGGAGGAGGCAGCCGTGTCCTTGGTGATGATTCTGGAGTCAGTGAGGCGGGTTGGGGGACTGCAGAAAGGGAAACTGCCCTCGCCAGGGAGGACTTCCTGGAGGAGGAGGCACAGCTCCCCTGGGACAGGGAGAATGGTGAGCAGCTAACCAGGCATGGCGGAATTGGGGGGCCTGGGTTGGGGGCAGGCATGAGTTCTAAGCAGAGAGAAGCAACACTACAAGTCCTTCAGCAAATGGCATATGACTTGACTGAGTGTGGAGTCACTGTGAGGGATGAGGCTGGAGGGCTGGTTGGCCTTGAAGGTCATGGAGAGTTACCTGGGCTTTGTGCTGAGGGTACTGGGGAGCTACAGCAAGGTTGTTGAGTAAGAGAGAGTCGGGCAGGTAGGTTTGTTCTGTGAAGGGAGGAAGGGAATCAGGTCAGAAGGGCAGGGTGACAGAAGGTGGGGAGGAAAGGGGTGGACTTCAGGCTTAGGAGGCAAAATGGGAGGGACAGACACGGTAGCTGACAGGTGCCTGGATGGCGGACTTGGCTGGCTGGGACCGTGGTCTGTGCTCTATGTGGCACTGCGGGTGGAGCTCGGATTAGTGATGAGATCTTCAGTTGGAGGCAGTATTCTAAAGGATATCCCAGTGTCTACCAGACCTTGAATACCCTGACCTTTGGGGTCTCTTCCGTTTCCATAATCTCTCTGGGAACTCTTGGGGCCATCCCTAGACTTCAGTTTCCCTTCTGGAAAATGGAGAGATTGCTTGATCTCTAAGGGCCCTTTACCTGTGTGACTTAAGGATGGAAAAAGTGCCTTCTCCAGGTCCCTGGCGGGCTCTGTCTTCCTAACTTTGCCTCACATTTTCTTCTAAAACCTTTGTCTCTTTGGGAGCCCACTTGCTACCCGCTTGATAATGAAAGCCTCATCCTATTGGGTCAAGTAGAAGTGGTTGACGTGGCTGACGCCCAATACGTGTTCAGATGTTTCTTACCTTCCATTACCCGCTTCTCCCATTCCCAACCCCATGACCACTTCCTGTTCTTTCACAGAACCAAGCTGTCCAAAAGGCCTGTCCTCAAAGACTTCACAGGGATGCTGTGACCCAAGCTCCAGCCTGGAGGAGGAAACAGCTTGGGCAGACATTAGGGTGGGAATTGCACAGTGTAAGGAATGGAAAAGTGTATAGAGGAATCAGGAGAAAAGAACCGGGAAGAAGAGGCTTCGGCAGATGGTGTGTATTTGTTTGACCTTGAAGAAGCACAGGTAATAGAGCATTCTAGGAGATGTGGGAAACCATGGCAGGTGCTTGAGCAAAGCAAGGGAAATTGAAAAGACTGGTAGCAGCTATAGAGGG EMBV3_12048 TGTTGGGGGTTTCGCTGGCTATTCTTCTTATTGGAGTCGTCCTGCTGTGCATTTGGAAGC Gene GeneID:282644|ITGB6:NM_174698:52_cdna Constitutive 0 NULL GeneID:282644 2 GENE ITGB6 NULL integrin, beta 6 EMBV3_42886 CATCCGAAAACTCCCTAAGTACAACAATTGGCCGAACCATGTACGTGATTCCGTTCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01180 TGCGCCAGCAGATGGAAGAGCTGAAGGCGAAGGAGAGGAGGCAGATGGCAGCCTTGCGGC Variant GeneID:522380|TCHP:NM_001164026:204_cdna 842^919 3 EMBV3_05943 GeneID:522380 17 GENE TCHP NULL trichoplein, keratin filament binding EMBV3_10290 GCAGCTGGTCTCCTCACAGCAGGGCCCCAAGACTTCCAGTGTCCCAACCTGGTATGAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29147 CACTCTTGTGTGTTTTCTTTGTTTTGGCCACCTCGCTCAGCTTGCAGGATCCTAGTTCCC Gene BVV0102_106209 + 0 NULL GK000018.2:54313936-54363678 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24312 ACCTTGCCTACAGAGTGAGGAGGAGAAAGAGACTGAAGAAATCAAAGTGCTGTCCTCTCC Gene GeneID:538921|KIF2B:NM_001101181:26_cdna Constitutive 0 NULL GeneID:538921 19 GENE KIF2B NULL kinesin family member 2B EMBV3_26988 AAAACCCTCCACCAAGCCACGAAGAAGGTATTTTACTGGCTATGTCATCAACGGAGGGCC Gene GeneID:539027|B3GALT1:XM_002685326:7_cdna Constitutive 0 NULL GeneID:539027 2 GENE B3GALT1 NULL UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 EMBV3_31459 GACATTCTCTTTGCCTTCCTAGGTTATCTGTCATCAAAACCACAAGGGGACCTGGACCAC Gene BVV0102_138216 + 0 NULL GK000016.2:32333421-32381117 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067034 TCONS_00069032 TCONS_00067035 TCONS_00067036 TCONS_00067040 TCONS_00067039 TCONS_00069031 TCONS_00067038 TCONS_00069030 2 XLOC_041344 XLOC_041846 Coding TCONS_00067039 XLOC_041344 NonCoding NonCoding KIF26B 16:32371533-32381528 x TSS50506 3427 2 TCONS_00067039_9 128 0.0364750510650715 7 0.657794676806084 0.000621175171686365 1.85055828110469e-39 2.69490907592704e-11 4.50268422792137e-12 2.46572029633622e-17 3.5259635200654e-11 0.000455727742262724 0.000151901376939874 4.40046051029957e-16 9.42971206741989e-21 4.8322661958107e-33 2.80719965852914e-49 8.04401401206589e-10 0.000388105383184752 6.99852048098634e-29 0 0 0 0.000407238568603169 4.87263358066653e-13 1.14140145652248e-29 0 0 0 0.000489774077546222 0.000464936144324705 0.000627460684733132 9.39195048854539e-18 1.99003094612816e-19 6.95646130175929e-09 XM_005216874.1 KIF26B PREDICTED: Bos taurus kinesin family member 26B (KIF26B), mRNA. 0.0 2733 100.00 0.441785818500146 NM_018012.3 KIF26B Homo sapiens kinesin family member 26B (KIF26B), mRNA. 0.0 655 82.94 0.192296469215057 0 noncoding 0 1 0 0 1.58216407541715 0.0637595460644183 -0.0837257685615997 0.146258091063618 CTCCAGGGGATCTTCCCAACCCAGGTATCGAACCCGGGTCTCTGGCACTGCAGGCAGACTCTTTACCATCTGAGCCACCAGGGAAGCAACTCAAAAAATAAGTGGATTACCCAGCACACAGGACCGGGAGCTCCCAGAGCAACTTCCTCGGGTGACCAGGTCACTTCCCCAGATGGAGAGGCCTTGTTGGCTTGGGAGGACAATCTACCCCTCACTCCTAAACCCCTCAGCCTCCTGGATTCTTTTCAGACCCTTGGAGACCCGAAGGCCAAGGCTGCTCAGTGGTGGGGAAATCAATGCTGTGTGTCTGCTAAGCAAGAGCTCCAGTTTGCCTGGTGCAGGCCTGGTGCCGAGTGTAATTATGGACTTCATGCCCAAAGAGGCATTTGCAGACCTTCAGTTCTTTTGTTAAAGAAGTCTGACATTTCCACACACTTCTGCCCAGGATTTTTCTGAACCCTCTTCTTCTTCCAAAGATGAGCCTCTCCTGGATTGGAATTATGCTTTTATCTGGATATGACAAACACTTTGGAACAGTTTGGGATCTCTTGTATGAACCCCATCTGAGTCAACACAGGACCGACCTCTGCTTCTGCATCTCAAGCTCCCCACCTTCAGAACAGCAACTGCAGAGAAAACAACAGGCGGGGTGTTTTCAATTTCAAGTCTGGAAGAGATGAAAGTTAGCGACAGCTTCCCCATGATGTAGAGGGGAATTCAAGGATGAGAAGATCAAAGGTTCCAGCTCTCAGGTGGGGCTTGAAAGCCCAGGATAAAGCAAACTCTCACTCTGTGGCAACATGAAACACCATCGTGAGATGCACTATGGATTTACTCCTGGGGAACAACCTCACTATTCCCCTTTTGGGCTCTGAGTTTTGTGATAATGCTTCCACCTCACACTGAGCTGAACTTTGGAGAGGGAAGATGATTTCAGACAAAGAGTCAAGGCTTCTAAATGTTAATTTCAAGTAAATATTTTTCTGGGCCTTTCATTTGTGGATAATAGAATGGAATAATGGGCTCTTTGACATTCTCTTTGCCTTCCTAGGTTATCTGTCATCAAAACCACAAGGGGACCTGGACCACTTCACATTTGGTTGTTGAATGAAGCTGTTCTTTGGTTACTAGAACTGCTGCATGACAGCTGATCAGCTGTACAATCAACTGATAGAACCAGGAACAATCACACGATAGCATAAAATTCATGATTTCTTCACAGAGTTCATCAATACTTGAGAAAGATACCTTTGACAGTTCTTCAATCAAAGGCTTTCCATGAAATGGTATATTTCAAGCCAGCAACCAAAGGGATGCCAAGTGGAAAACCCAAACAAATTCAACAGATTGACATCTCTCCAGCCATTTCCATTAGGCTGCTTTTTAACAAGTTCATTTACACAAGAGCAGAGACCAGAGCACACCCAGCCCCAGAACCATGGAGCTGCCCTGCAGAATGGGGTTACGGTGGGGGAGGCCTGCCTCTCCCAAGTTGGGGCTGAGGAGTCAGTTAGCCAGGACTGCCTCGCCTGGAAATAAATTCATGAAGTTATGCTGCATTTGAGGTCAAAAAGAACAATACTCTGGAAAATCCTGGGCACCTCTATCAATGGCCTGGCTAGAGAGGCCTGGGAGAAGGTCCTGACTGGAAGGTGTCAAGGTTGAGCAGACAGGCCTGGTCCTTTCTTGGTATGGAGGCTTTTGTTCAAAAGGACTGGAACTTCTTGCATTAAACAGCACTCCGGACAGCAGAAAAGTTGTGTAACCCCACCCCCCCCCACATCCTTCCTTGTTCTGGACCAAAACTACTTCCGTCTCTGAGCATCTACAAGTCCAAGAAGGTCTCCAGACTGGGGAAAATCCTCTGCTCTAATAAATTTGCAAAACTGGGGAACAAAAAATATGGCTCCGTTGAACTGGTTCATGTGTTCTTTAGATCCAGAATCTTTGGAATAAAAATGAATATGAAAAATGTTTTTGAAGACCCCAGCGTCGTGGGTAAAAAGGAACCAGTCTTACGTGCCTCAGGACATGTAAAGAGTCGGATATGACTGAGTAACTGAGCTGAACTGACGTGCCTCAGGACTTGGAGGGGCAACTATTCAGCACAAACATCCCACTCAAAGGGTAAGGAGGGCCAGGGTCATAGAGGCGCCTTTCCCCCTGAAGACACACCTGTTTCTCTCAAGCTCACGTGCGCGTGCTCCATAATCGACCTCCAAGTCTGCCCTCTGACCCTGCCACTGGTGGGAGGTGGCAATGAGCATCACCTGTGGTTCCAACCGTCCCTGGAAACACACTGGCTTGGGCCCAGAAGTCTCTAGCTTCTGTTCGAGTGGCCTTCCCAGCAGAACCATAGCAGACAGTTAACATTTATTCATATGCAATACTGATTAGGAAAGAGCTCTACAAACACAACTTACTTAGAAATAGCAAGTCAGAAATAGGCTAAAACACCAAGAGAAAACGAGCTGTAAATACATTGCAAAAATGTGTTTGATTTTTTTGTTGTTGTTCATGTTGTTGTTTTCATCTTGACTAGCACCATCTGTACACAAGAAAGTATGAACATAAACGTTTGGATAATAACAAAGATTTGCAAGGCACTTAATCAGTCATTCGGGGAAACCTGTTGTTTTGTTTTAGCTTTCCACAACAATCCCACGTCCACTCTCGCCCTTTCTCACAAACCAGGAGAAGAGGGAGGTCTCTTTTGCCAGCAGTTCTTATGTACAAACAAGTTCTTGAAAGTTCCTCAAAGTGCTTTTTCAGTCTCACGGGGGCTTCCACGTCCCTTGGGCTTCCCATCATTCGCTCCTCTCCTGCGGGTCTGGTTCTGCACCGTTCCTACAGAAAACAAAAGAAAAACTCGCCTTCCGCTCCACGCTCACTCCAGACTTGCCATCAACCTTCGTCCTCCTTCCGTGATCTCTGAGCGGCGCCGGCACTAAGAGCCGGCGCAGCGCGGCTGCCTGCGGCTCGGGAGCGAGGGCCGGGCCGGGCCGGGCGGATCCCGTCAGCGGCGCCGGGAGGTGATGTCGAAGCAGGTGATCATCATGAGGTGCGCCTTACAGAAGTTGACACGGCTCTCCAGGCGCTCCGTCACGCACTCCAGCGCTTCCAGGTACTCCAGGGAATCCAGCTCCAGAACCTGCTCCAAGTCAACTGCAAAGAAGGAGAAGCCCGATGGAGACGCGCCGCCTACGGGGAAGGGTGACCCGACGGGTCGGCCCGGCCCGAGGCTGCTGCGCCTGTGCCTGGAGGTCTTAGCACCACAGTGCTCTCGACCTTCTGCAGCTCTCAAGTCAGGAGCAGAACCCTTTGTTACTTGCAACTGTACTGGGGCCCTCCATTCTAATGATAACACTAAATCCCCGACATTTAATTGAGGCTCTGTGTGTGCTAAGTTGCTTTAGTCATATCCGAC TCONS_00069032 TCONS_00069032 TCONS_00069032 TCONS_00069033 r 5' 0 TCONS_00069030 TCONS_00069031 TCONS_00069032 r 3' 5660 EMBV3_18389 GAGAAGGAGATTATAGTACACGGCATGCAGCCTGTCCAGTGCTGGTTGGAAACAAATGGG Gene GeneID:518288|P4HA1:NM_001075770:323_cdna UTR3_Alt 2 NULL GeneID:518288 28 GENE P4HA1 MGC137838 MGC159694 prolyl 4-hydroxylase, alpha polypeptide I EMBV3_06923 CTGCCACTTTATCACTTATAAAAAAGACTGAATGTTAGCAGTCCCACATGGCTGAATCTA Gene BVT0102_432075 - 1 EMBV3_43646 GK000012.2:73978958-74020717 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040917 1 XLOC_024730 NonCoding TCONS_00040917 XLOC_024730 NonCoding NonCoding - 12:72936540-72936898 - TSS30418 358 0.363128491620112 1 0 0 0 0 0 3.44774637289171e-05 0 8.14484036289022e-06 0 1.46929942816166e-05 0 0 0 0 0 0 0 0.00136806563745994 0 9.68142020710708e-05 0 0 0 0 0.000398042828465021 2.58044257792828e-05 0 0 2.6830098546483e-05 0 0 XM_002705410.2 LOC530437 PREDICTED: Bos taurus aTP-binding cassette, sub-family C (CFTR/MRP), member 4-like (LOC530437), mRNA. 2e-87 325 84.39 0.860335195530726 0 noncoding TCCAGTATTGGGGAGGATTTTTATTGAAAATTACTGGTTACACATGTATTTATAACAGTTTAAAGCCCCCCAATAAAACACAAAATGGTAGAAACAAGAACCTTTTGTGTGAATGTGGTTACCTATGGTTTAAAATTCACAATCTAATGTTGTCTGACCAAATGAAATTAAGTTATATGTTAATAACAAAAGAAAACTATATGTTGAACCATATGAAACTGCCACTTTATCACTTATAAAAAAGACTGAATGTTAGCAGTTCCACATGGCTGAATCTAATTAAAAATATCCATTCGAATTTGAAATTTATTGTTACCATCTTTCTAAATTCCATATATATGCATTAGTATACTGTATT TCONS_00035575 . 3' 35100 TCONS_00035575 . 3' 35457 EMBV3_14988 TGTGTAGTGCGGGAAGCCTACAACCCACACCGAGGAAGGATGGGTCAACTAACGAATGTT Gene BVV0102_191780 + 0 NULL GK000001.2:134130530-134191661 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002275 1 XLOC_000560 Coding TCONS_00002275 XLOC_000560 NonCoding Coding - 1:134188233-134189471 - TSS1159 1238 3 TCONS_00002275_1 59 1 0 0 0 0 0 0 0 0 0 0 6.64700105576585e-06 0.000192306208244533 0 0.000238720616333614 0 1.58520110244037e-05 0 0 0 2.89617742478937e-05 0 0 0 0 0 3.35789694617005e-05 0 0 2.32758364599853e-05 3.92132951118759e-06 0.000169974785238197 XM_005247572.1 MSL2 PREDICTED: Homo sapiens male-specific lethal 2 homolog (Drosophila) (MSL2), transcript variant X2, mRNA. 1e-07 62.6 79.17 0.0573505654281099 0 noncoding 0 0 0 0 AGTGAATTTTATAAACTATTTGTCATTTTCTAGATAAGATAACCAAATACATTTTGCACAGCTTTCTTTCACAAAATTAGGAAAATAGATTATTTTTAACACTTCGTACTAATAGTATGCTAGTGCTTCCAAAGAAAATGTCCTCAAATGGTAATAGAATTTATCAGAGGTTATATGGGTTCTGTTGCTACCTTAACTCTTCATTTCTACTCTAAGTGGCAAGCCTCTAAAACAAAAATGTTTTTGTCACAAAAGATTTACATACGTCATAAATCTTCGTTTGCAGACATGTTTAGAGCATTTACTAAGCGCAAAAAGTTATGCTGAAGAGCTTTGGTGTATCCAGAGATAATGATTCCTACGCTGTTTCTATTTTTAAAGACGGTTTTGTTCTTTTGGAGGGGAGGGGAGTCAGACGTTAAATTAGGGTTTTGTTTTTACCTCACTGACCTTGGTCTCCTGCAAAAACAGGTCAAAACTTACTTTAAAAAACAGGTAATACTTTCAAGGATTTAGGTTCTAAAGCAGGACCATGGGTTCTTTATCTGTTCATACAGAAGGCGAGGTCTGTTAAAGGACAGAAAAAGAGATTAGTTTTGTTGTTTAATTGGATTCCTGTGGAGAGCTCAGTGCCCTGGAAGGCTGGTCTGCTCACGTCCGTCGTTCTCCAAGCACTAGGAGAAAGAGCCCGCTCTGACGGGTAGACAAGGTGGGTGCGGGCACCACCGCTTCAGACGGCCTGCTCCGGCCTTAGAGGCCTCAGGGTGCCGTCGACGTGGGCCGCGGCCTCTAAAGAGCCCACGCCGCCCGAACGCCCGCGGGGCGCGCGGCCACGTCGCTCGCCACCTCCCTTCTGAGCCGGGCGGGTGCAGGCGAGCAGCGGCAGCGCCCTTTCGGCCGTCTGGAAGCTCGGTTCCAGGAGAAAGGCCGCGAGGGCGGGGCTTGGGGCGGTGCGGAGCTTTCTCCTCACCTCGCGGTCAGCCCGGGCGAGGAGAGGCCGCGTGGGGCCAGGGCGGAGCGTCACATGGCGCGACCCAGCCGGGGCTCCGCGTTGGCGGTCACCGAGGAAGCTGTGTAGTGCGGGAAGCCTACAACCCACACCGAGGAAGGATGGGTCAACTAACGAATGTTTCACCACAGCCCACACGCCTAAGAGGGAATTTGAGAGCGCATGGGGGAGGGGTGGGGAGAGCAGGCGGTTCACCAAGAGCACGCTCCGTACAGAGAGCAGTAAAGTG TCONS_00002276 s 5' 0 TCONS_00002276 s 5' 0 EMBV3_42084 ATTCAATCACTCAGGAGAAAGTTTCCAGAGGACGGCGGGATGGCTGCGCAGGGCTCGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12263 TCCAGTGGTTAAGACCCTGTACTCTTAATGCAGACGGCTAGGGTTCCATTCCTGGTCAGA Gene BVV0102_283437 + 0 NULL GK000004.2:98070047-98639419 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09580 GCTCAGTTTCCTGCCATATCTACCATTCCTTTGTCACTGGAGCAGTTACTGTTTGCTCCC Gene BVT0102_009691 + 1 EMBV3_31668 GK000025.2:2726204-2733864 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04997 ATGAGCACCCTGTTTTCTGCAGCATTTTCCCTCAGTTGGTCAAGCTGGCCTGTTCTAACC Gene GeneID:768030|MGC137098:NM_001077089:365_cdna Constitutive 0 NULL GeneID:768030 15 GENE MGC137098 NULL hypothetical protein MGC137098 EMBV3_00665 GGGGAGGTATCCACTGAGGAGCGACAGCTAAACGCCAAAAAGAATAGAAAAATATATATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42878 TGTGCAGTGTCAAGCCATGCTTCTTCAGCACAAAAGGCCATGCTCAGACTTGGAGAGGAG Gene GeneID:504789|BEND6:XM_002697169:191_cdna UTR3_Alt 2 NULL GeneID:504789 23 GENE BEND6 NULL BEN domain containing 6 EMBV3_16468 TTGGGGTCCCCCCAGGGAGCTGCCAATGGCTTTATTTATGAATCTGGTTTTTGGGTAGTC Gene BVV0102_340201 + 0 NULL GK000020.2:14941023-15075200 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116099 1 XLOC_070268 NonCoding TCONS_00116099 XLOC_070268 NonCoding NonCoding - 20:15032138-15032783 - TSS86567 645 1 0 0.00398677510389681 0.00208758754272494 0.00295554159722728 0.00245906213833284 0.00260255018525371 0.00186893937370556 0.00261296578608514 0.00188904131532338 0.00227529298669909 0.000146718581385537 0.000177456400843264 0.000124733035884544 0.000186837005216669 2.91720278533595e-05 0.000190162809948756 0.00102370652486778 0.00334620149230241 0.000855815924558714 0.00163430500452686 0.00170587363969756 0.00027768673158986 0.000103544303919521 0.00102408029545389 0.00127359152319985 0.00427525606708434 0.00510112853250325 0.00204389125125392 0.000178701034732305 0.000150530396503727 0.000363531332206459 NM_014757.4 MAML1 Homo sapiens mastermind-like 1 (Drosophila) (MAML1), mRNA. 0.0 684 84.25 0.989147286821705 0 noncoding 0 0 0 0 -0.064828849197799 0.605373115286765 -0.163807260136681 0.019092793331599 TATTTATTTTTTCCATACTAGCAAAATACTTTTATTATTTTATAGTGATAAAACAGGAAAGTAAAGACTTCTTTTTGGTGTATACCAGAGTTAAGGAAGTAAAAGAATAAGGGAATTAATAGAATTTTTATGTACTTTGATGACAGTAAAAAGTTAACAATACCAACTGTTTGTCATAAAACTTATAGCCCCCCAAAACACATATATAAAGGATCATAGTTTTTAAATCTATAAAAGTAAAAAATATACAGTCAGAAGCTCTAACGCTTATTCCATCTTTAATATAAAATTGTAAACATTTATTTACACAAAGCAAATGTGTATAACAAAAGTCCAAGCACCCTTTTCTTTTGAGTCATCGCTCCTGGAAGATGGGGATTTGCACTGAAGTGAAGTTGTCTCCTTCCCTGACTACCCAAAAACCAGATTCATAAATAAAGCCATTGGCAGCTCCCTGGGGGGACCCCAAGCATCACATTTATTGCTCTGACACTGCAGCAGGTGAGAAGCCTGCCGTCTGTCTAGGTGGCCCCAGGACTAAGGCAGGGGCAGCCCTCCCCACAAGGGGGGGCAGAGGTGTGAGTGTCGAGGACAGAGGTGAGCGGCAGCCAGAGGGAGACCAGGAGAGGAACAGGGACCCACAAC TCONS_00114628 TCONS_00114629 . 3' 21955 TCONS_00114628 TCONS_00114629 . 3' 22599 EMBV3_18064 TGGACGATGTGTAATGCCCACGACCTGCCCTTACCGTGCCAAGCAGGAAAGAAAATCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36209 TCTTTCAGCTCCATTTGAGGACATCTACGCTGGACTCTGGGGCTTCAACAGCTCTCTAGC Gene GeneID:493988|SLC14A1:NM_001008666:35_cdna UTR3_Alt 2 NULL GeneID:493988 24 GENE SLC14A1 MGC127665 RACH1 UT-1 UT-B solute carrier family 14 (urea transporter), member 1 (Kidd blood group) EMBV3_27240 AGGGCATCCATGTCTACCTGAAAGAGAAGGAATACAGTGACTGCGCCTGGGAAATCGTCA Gene GeneID:617112|LOC617112:XM_002689529:172_cdna Constitutive 0 NULL GeneID:617112 8 GENE LOC617112 NULL similar to interferon-tau EMBV3_12629 GTGTTCCTTGAGCTGGGTCTTCATACGTGGTCTTGAGCAGGGGTCATGGAAAGTAGCTCT Gene GeneID:529990|SIRPB1:NM_001080911:1180_cdna Constitutive 0 NULL GeneID:529990 13 GENE SIRPB1 PTPNS1 signal-regulatory protein beta 1 EMBV3_42736 TCCCCATCTTCAAAAGTGGAAGCACTGGAAGCTCCTTTGTTCAAGCTGTGTGCCTTTGAG Gene BVT0102_158723 + 0 NULL GK000008.2:58506115-59542092 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227744 TCONS_00227743 TCONS_00227742 1 XLOC_138306 NonCoding TCONS_00227744 XLOC_138306 NonCoding NonCoding - 8:59373331-59397018 - TSS169952 654 4 0.972557628979144 0.000495340332901931 0.000365959236331926 0.000475745334798738 6.77860061864723e-05 0.000355196588955555 2.58159720777137e-05 0.000204258815158345 0.000224551878737912 0.000421083108451889 4.60702622907055e-10 0 0 2.80513728501746e-10 0.00199596006133251 0.000350871153135271 0 0 0 8.0289328269107e-10 0.000478319585372747 3.09721731852068e-06 0 0 0 0.000227688355500947 0.000129165708617532 4.25490474391939e-08 0 0 0 0 noncoding 1 1 1 0 -0.865143404682495 0.195625583122018 -0.145234608508632 0.137533522787771 GGGTCTCAGGATGTGAGCCCTGTTTGCTTTCAAAGTTAGAGCTTTTGGGGGCTCATCTCTCAGGTGCAGGTACTGAAAGCATTTCATTACCCTAGATTTCTGCAGAACCTCTGAAATGCCAAGAATTTGCCTGCTGTTCCTAAGTTAGGAGAAATACTGCCTGGTCCAGCAGGTCGGAGGACCTTACCTTTGCATGGGGCCCACCGTGAATGTGAAATGAACTGTGAATCTTTGTTTTTCCTGGACCAAACTAAAGTGAACTTCATTCCTGTCTGATCTTTCCCCATCTTCAAAAGTGGAAGCACTGGAAGCTCCTTTGTTCAAGCTGTGTGCCTTTGAGAGAGGAAGAAAAAGACTTCAAGGGGCAAGTTTACTTTAATGCAAAGAGTCAGTTTTCAAGTAATGTAATCCTTTTTTGGATCAACTGATGTTGAGTATGATTAGCAAACCCTTGATAATAAAGTCTCTGCATTTAATGCTGATATCTCAGACCTATGCTGTACACTTTCCATAAGATCTAAGTACAATATGTAATTCTTAATTTCTATTCAACTGTATATTTGAATACTTTTATTTTGTGTTGGGAACAATGGGAATAAATGGAGTCAGTTAACTAGGTCTAATAGGAAGAGTTCCTTTCTCTCTTGTCTTGGT TCONS_00227745 s 3' 168433 TCONS_00227745 s 3' 145075 EMBV3_31752 TTTCTCTCTCCACCTTTGCGCCCAGCTTTCATTCTGTGCCTCTGTATTTCTATTGGTGCG Gene GeneID:507252|OLFM2:XM_002683637:24_cdna Constitutive 0 NULL GeneID:507252 7 GENE OLFM2 NULL olfactomedin 2 EMBV3_39761 GCAAAATCAGTCGCCTTCGCCGGGAGTGTCCCTCAGATGAATGTGGTGCTGGAGTTTTTA Gene GeneID:286839|RPS27A:NM_174778:36_cdna Constitutive 0 NULL GeneID:286839 11 GENE RPS27A NULL ribosomal protein S27a EMBV3_04947 ACTGTGGGTATGGAGACAGTGCTGCAAAAGGCGGAGATGGTCCACACAGGTCTGAAGTTA Variant GeneID:504519|CAP1:NM_001035010:59_cdna 145^248 2 EMBV3_00714 GeneID:504519 3 GENE CAP1 MGC127425 CAP, adenylate cyclase-associated protein 1 (yeast) EMBV3_01137 GTGACAACTGTTATGTCTCGTTTTGGCCCTAATGCCTCCTTTCAGATCCTTCCAAGAGTG Gene GeneID:537938|CPPED1:NM_001031771:246_cdna Constitutive 0 NULL GeneID:537938 25 GENE CPPED1 FLJ11151 MGC154988 calcineurin-like phosphoesterase domain containing 1 EMBV3_27507 CACTTGGCAGAGCAGGGAGGAGGGGAAGGGATGCATGGTCACGGAGGCTATGACTCTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29583 CGGCCATTGTGGCCAAGCAGGTGCTTCTGGTGAAATACCTGGCCTTTCTCCGCAAGCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40922 TCCCGCCGAATTGGTAAGTAGCAGTCCTCTCAAGGAGGCCATGGTTTTGCTCTGGATTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14498 CACCCCATCTCCCCCATCTATCGTTGGCTGTGGTGTTTTCTGTCTCCATTTGTGCTGCTA Gene GeneID:785933|LOC785933:XM_002695207:916_cdna Constitutive 0 NULL GeneID:785933 18 GENE LOC785933 NULL similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT5 (Solute carrier family 6 member 16) EMBV3_14609 GAGTACCAACCGATCGACATCTAAATATACCAGGGCTAATAACAGGACTGAAAGGGACCG Gene GeneID:510014|LMBRD2:XM_002696378:95_cdna Constitutive 0 NULL GeneID:510014 20 GENE LMBRD2 NULL LMBR1 domain containing 2 EMBV3_18215 TCAAGCCTGAAGTCCCACCTGAAGAGAAATCCAAAGCCGCACCTAAGGCAGAAGCAACTC Gene GeneID:504471|PCOLCE:NM_001045888:74_cdna Constitutive 0 NULL GeneID:504471 25 GENE PCOLCE MGC137826 procollagen C-endopeptidase enhancer EMBV3_21288 CCCAGAGAGATTATGGAAACGGAAGAGACCCCAAAGGTCAGGGTATTCAAGGTCTGGTAG Gene BVV0102_116101 - 1 EMBV3_04626 GK000018.2:53380057-53383532 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084034 1 XLOC_051434 Coding TCONS_00084034 XLOC_051434 Coding Coding MARK4 18:53325732-53382652 = TSS63028 4645 1 TCONS_00084034_4 333 0.181700753498385 14 0.918638767371177 0.000734180867507959 0.000917754594212463 0.000485543549885213 0.000610171836639475 0.000732782110320146 0.000424996161245785 0.000913376832877149 0.000767650574613734 0.00171031001769594 0.000161698852214096 1.62271830542195e-06 5.23337227275944e-05 0.000260980386316307 0.000949817576934942 0.000436397932314151 9.24447291706214e-43 6.37131504861209e-34 7.13777864901617e-17 0.00079968051230286 0.00123495425444273 0.000541371809125024 4.73673504215767e-149 1.7755078658197e-14 2.65490074464992e-27 0.000491097686235722 0.000768029714711984 0.000545639592487802 6.06273393840615e-05 8.10369782346811e-05 3.71583183178828e-21 NM_001035359.1 MARK4 Bos taurus MAP/microtubule affinity-regulating kinase 4 (MARK4), 0.0 2836 99.75 0.340365984930032 NM_001199867.1 MARK4 Homo sapiens MAP/microtubule affinity-regulating kinase 4 (MARK4), 0.0 2024 95.70 0.270398277717976 TCONS_00084034_4 sp|Q96L34|MARK4_HUMAN MARK4_HUMAN MAP/microtubule affinity-regulating kinase 4; 0.0 681 98.79 0.987987987987988 4 coding 0 0 0 0 0.0276573606809303 0.794975098911959 -0.00274096321285588 0.969374744634855 AACGGTGCCCGGGAGCCAGGAGAGGAGAGGAGGCTTGTTGAGAGGATCCAGGAACACACTGTGCCCAGAGGGACGGCAGGGAGCTAGGAGACAGTGGGTGAGGAGAACCTACCCCTAGGAGTGGGCAAAGGGCATGAGGAAGCCCCTGCAGGAGGAAGAGCACAGCACAGGTCAGGCGAGTGAGGAAGTGGGAGAGGTGGGAAGAGGCCAGCACAGGACGGGCTGCTCGAGGCAGTGTCCCAGTGGAGAAGGGTGAGCAGATGAGCCCCCGGGTCTGAGGGAGCATCAGATTCCAGACTGTCAGACTTGGAGGAAAAGGATCCAGGACCAGGCAGACAGCGAGCAAATGGATGTAGGCGACAAGGCACCTGAATGATGGTGTTGTGTTGGAATTGCTGTTAATGGTTCAAGAGTGAATTGCCAGCTTGGTGGCCCCAGAGTTGAGGATGCTTGAGATACGAAGCCCAGCATGGCACCCTGGGCAGTGGCCGCTCCTCGGACAAGGGCCCGTCCTGGTCCAGCCGCTCCCTGGGCGCCCGCTGCCGGAACTCCATCGCCTCCTGTCCTGAGGAGCAGCCCCACGTAGGCAACTACCGCCTGCTGAGGACCATTGGGAAAGGCAACTTTGCCAAAGTCAAGCTGGCCCGCCACATCCTTACTGGCCGGGAGGTCGCCATCAAGATCATCGACAAAACCCAGCTGAACCCCAGCAGCCTGCAAAAGCTGTTCCGAGAAGTCCGTATCATGAAGGGCCTAAACCACCCCAACATCGTGAAGCTCTTCGAGGTGATTGAGACGGAGAAGACGCTGTACCTGGTGATGGAATATGCAAGTGCTGGAGAAGTGTTTGACTACCTCGTGTCGCACGGCCGCATGAAGGAGAAGGAGGCTCGAGCCAAGTTCCGACAGATCGTATCGGCTGTGCACTACTGTCACCAGAAAAACATTGTCCACAGGGACCTGAAGGCCGAGAACCTCCTGCTGGACGCCGAGGCCAACATCAAGATTGCCGACTTTGGCTTCAGCAACGAGTTCACGCTGGGCTCGAAGCTGGACACATTCTGCGGGAGCCCCCCGTACGCCGCCCCGGAGCTGTTCCAGGGCAAGAAGTACGACGGGCCGGAAGTGGACATCTGGAGCCTCGGCGTCATCCTGTACACGCTCGTCAGCGGCTCCCTGCCCTTCGACGGGCACAACCTCAAGGAGCTGCGGGAGCGAGTCCTCAGAGGGAAGTACCGGGTCCCTTTCTACATGTCAACAGACTGTGAGAGCATCCTGCGGAGATTTTTGGTGCTGAACCCAGCTAAACGCTGTACTCTCGAGCAAATCATGAAAGACAAATGGATCAACATCGGCTATGAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAGGAGGACTTCGGGGACACCAAGCGAATAGAGGTGATGGTGGGTATGGGCTACACACGGGAAGAAATCAAAGAGGCCTTGACCAGCCAGAAGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGGGTGGGGACCGGGGTGCCCCGGGGCTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAATGGAACAAGCTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAACGGAGTTCCTCCTCCACCTACCACCGCCAGCGCAGGCATAGCGACTTCTGTGGCCCATCCCCCACACCCCTGCACCCCAAGCTCCCCCCTCCCCCACGCTGACCCTGGGGTTTTCCTTCCCTGCCCTCACCTGCAAGTGAGATGAAGAGGTGTGTGACTTTGGGCTAGTGGTTTCTCCTTTCTGAGCCTCGATTTTCTCATCTGCAGAATGGGAGCAGTGGGGGTGTGGGGTCAAGGGTGATTGTGGAAGAGGGCAGGAAGGGACTCGGCCTCATCCACGAGGCCCCAGTTCCTATATCAGACCCCTGTTCATCCACTCACATACCCACCCACATGATATACTGGACTCTAAGCCACTTCTTACTCCAGTAGTACATTTACTCAATAAACAGTCATTGACCGGTGCCTACTCCATCCAGGCCCAGTGCTGGAAACGGAGATGCAGGGAGCCCCTGTCTATGGGGGACATGGGTTCTGATAGACACTAGAGAAACCATTGCTTTTGGAGGGGGTTGGGCTAGAAGAGAAAGTGAGAGGGTTTGGGGAAGGCACTCCAGAAGAACTGATGCTGGAGTTGGGCTCTGAAGGATGAGTAGGAGTTGGCCAGGTGTTGGACATCCCCTGGGCAGAAGCCTGGAAGTGGGAATGCATGGTATAGCTCAGAGAACTGTGGGTAATTTCAGTATGGCTGCTGTGTTGGGGGCTGGGTGGAAAATTAGCAAGAGGAATGCTGTATTAGGACTAATAATCCATCTACATTTAAGCAAAAAGGTATTTGCTCATTTCATAGGCCAGGGGTGCCTGACTAGGTACAGCTGGATTCAGGCCACAGGCTGGCTCATCTCTGCTTTTTTCAGTGTAAGTTTCATTCTAGTAGTTTCATCCAATAGGTGCCTGGTGTCAACGGTGACACCAGCAGTCCAAGCTTTTATCCTTCCCGTTTAGGGGCTATAGCAGAGTTCCTGATTGCCAACTTCAAGCAAAAGTCCCAAGACAGGCTCTCATTGGCCCGGATAAGTCATGTGATCACCCCAAACCAGTCACTGTGACTCTGGAGTGGCCTGTACCTAGAGCTGGACTTAGAGGGGTTCCTCAAAGAAAAGTCAAGGTGTCACGATAAGGGAAGTAGAAGCATGATAGATGTAAGCAGAAAAGGGCTGTCCAGCGCAGGAGGGCAGGTACTTCACCAGAGCCTTGTGGGCCTAAGCGCGCAGTCTGGGCTTTTATCCAAGGGCACTGGGAGCCACGGAGGGTTGCTTGCAGGAAAGAAGCTTAGTTAAACTGTCTCACTTGCCTGTGAGGCAGTTGTCATGGTAGGGTCAACTGTTGTATTCTTCATCGGACAGGAAAGTCAAACGAGAACTGAAGGGGGCTAAAAATTAAGAGTGGCTGGCTCAAGGGAAAAAAAAAAGGTGGTCAGTGTTGAAAAATTCAGGGTCTGAGGGAGAATCATAATCCTATCATGAGTTAGGCCATAACAGGACTGCCGAAAGGTGCTTGTAGTTGAAAGGGTAGAAAAAAAGGTGAGGCAGGGGAACCAACCCTGTCACAAAAACCTCAATTCCTGAGTTCTTCCCTGGTTCCCAGCCCTAGGCTGGGGACACAGTGGTGGCCAAGACAACCCCACCTCTGCCCTCTTAGGGTTCACAGTCCAGGGGAGGAGGCAGCCGTGTCCTTGGTGATGATTCTGGAGTCAGTGAGGCGGGTTGGGGGACTGCAGAAAGGGAAACTGCCCTCGCCAGGGAGGACTTCCTGGAGGAGGAGGCACAGCTCCCCTGGGACAGGGAGAATGGTGAGCAGCTAACCAGGCATGGCGGAATTGGGGGGCCTGGGTTGGGGGCAGGCATGAGTTCTAAGCAGAGAGAAGCAACACTACAAGTCCTTCAGCAAATGGCATATGACTTGACTGAGTGTGGAGTCACTGTGAGGGATGAGGCTGGAGGGCTGGTTGGCCTTGAAGGTCATGGAGAGTTACCTGGGCTTTGTGCTGAGGGTACTGGGGAGCTACAGCAAGGTTGTTGAGTAAGAGAGAGTCGGGCAGGTAGGTTTGTTCTGTGAAGGGAGGAAGGGAATCAGGTCAGAAGGGCAGGGTGACAGAAGGTGGGGAGGAAAGGGGTGGACTTCAGGCTTAGGAGGCAAAATGGGAGGGACAGACACGGTAGCTGACAGGTGCCTGGATGGCGGACTTGGCTGGCTGGGACCGTGGTCTGTGCTCTATGTGGCACTGCGGGTGGAGCTCGGATTAGTGATGAGATCTTCAGTTGGAGGCAGTATTCTAAAGGATATCCCAGTGTCTACCAGACCTTGAATACCCTGACCTTTGGGGTCTCTTCCGTTTCCATAATCTCTCTGGGAACTCTTGGGGCCATCCCTAGACTTCAGTTTCCCTTCTGGAAAATGGAGAGATTGCTTGATCTCTAAGGGCCCTTTACCTGTGTGACTTAAGGATGGAAAAAGTGCCTTCTCCAGGTCCCTGGCGGGCTCTGTCTTCCTAACTTTGCCTCACATTTTCTTCTAAAACCTTTGTCTCTTTGGGAGCCCACTTGCTACCCGCTTGATAATGAAAGCCTCATCCTATTGGGTCAAGTAGAAGTGGTTGACGTGGCTGACGCCCAATACGTGTTCAGATGTTTCTTACCTTCCATTACCCGCTTCTCCCATTCCCAACCCCATGACCACTTCCTGTTCTTTCACAGAACCAAGCTGTCCAAAAGGCCTGTCCTCAAAGACTTCACAGGGATGCTGTGACCCAAGCTCCAGCCTGGAGGAGGAAACAGCTTGGGCAGACATTAGGGTGGGAATTGCACAGTGTAAGGAATGGAAAAGTGTATAGAGGAATCAGGAGAAAAGAACCGGGAAGAAGAGGCTTCGGCAGATGGTGTGTATTTGTTTGACCTTGAAGAAGCACAGGTAATAGAGCATTCTAGGAGATGTGGGAAACCATGGCAGGTGCTTGAGCAAAGCAAGGGAAATTGAAAAGACTGGTAGCAGCTATAGAGGG EMBV3_25235 GCTTTGGACATACAGCTGCTCAAGGAGGGACCTGTGCTATAATTAAGGTTGAATGTTGTG Gene BVV0102_341105 - 1 EMBV3_43572 GK000013.2:64274275-64357861 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123063 TCONS_00045931 TCONS_00156604 TCONS_00045930 3 XLOC_074617 XLOC_026577 XLOC_095064 Coding TCONS_00123063 XLOC_074617 Coding Coding - 21:21960940-21962060 - TSS91822 1120 2 TCONS_00123063_1 54 1 0 2.69187989325073e-05 2.24296034677259e-06 3.44271285059829e-06 2.16253635533554e-06 1.04044651702991e-05 8.12884117181214e-06 3.93615851886097e-05 2.07467596276812e-06 2.34824872462862e-06 1.10209507784522e-05 1.5329354300948e-06 0 4.98140202114941e-07 1.39999848905057e-06 9.62754632941314e-07 0.00108346911626247 0.00237175344035176 0 1.06024338210584e-05 1.19092888010154e-05 8.73266498824001e-06 2.81086161231792e-06 0.000118771096919783 0.000172136940949479 6.87839887694134e-06 1.81453825724653e-05 6.19670311265686e-06 1.28641174098752e-05 3.61206032420738e-06 0.000183588538514418 XR_240300.1 LOC101902865 PREDICTED: Bos taurus uncharacterized LOC101902865 (LOC101902865), 0.0 728 92.96 0.441071428571429 TCONS_00123063_1 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 9e-07 45.8 45.83 0.87037037037037 0 noncoding ATAGGGACAACAGATATTATGATTAAAGTAGAGGCCTTGACTAATTTCACAAAACAGGCCCTCCTAGATAGAACAAAAGCTATCCTAGCCTTAAATGAAGAGGAAATCCAAATGAGAAAAGTGGTAATTCAAAATAGAATGGTTTTGGACATACAGCTGCTCAAGGAGGGACCTGTGCTGTAATTAAGGTTGAATGTTGTATATGCATTCCTGACTTATCTGGCAATGTATCAACTGCTTTAGATGACATGAAAAACCAGGTAAAAGCAATGTCAAATGAAAACATTCCTTTCTGGACTTCGGTCCTATCTTGGGTGAAGGGCGATTGGTGGGACCTGTGCTATAATTGAGGTTGAATGTTGTGTATGCATTCCTGACTTATCTGGCAATGTATCAACTGCTTTAGATGACATGAAAAACCAGGTAAAAGCAATGTCAAATGAAAACATTCCTTTCTGGACTTCGGTCCTATCTTGGGTGAAGGGCGACTGGTGGAAAACTATACTTACCATTGTTGTAGTTGCCTTGATAGTTCTGCTTTGTGGACCCTGAATTTTACAATGTATTCAATATATTCCTATGAATGATGCTCATAATATAAGTTAAGAGCATCAAGAGTGGGGAATGAAGGAGGAAACAGACAGAGCTGGACTCCATCTTAGGCCAGGCTGTGAACATTAGGCTACACGCATGGTCACCCTCCCAATGGACTCTGAACTTGGTGCCCAGTGTCTATAGAAATGGTATACCCATGGAAAACCAGACCCCCTGATAAAAGAGCCTCAGGACTTGTACTTGGACTCTCCGTTGCCTAAAATAATATGCTAATCTCTCTGTAACAGAACAAAGTGGTAAATTCCATTATGTTTATTGGGATATGACCACAGGCCTATTGATAAATATCCACTGTTTATCTAGTCTTGTGACACATGAATCATGGGTTAAATTTGATCGTACCCCTCTTTTACCTTGTCCAGACTAGTTTCAAGGAATTTGGGGAGGTGGGTTTGAGTAAGTACACTTGAGGTTTATAAGGTTTTTCACAAAAACTGGTCAGGGTCCTTGGCTAAGAGGAGACTCTGCCTTGGGCCCGCAGGTGTAATAAATTGCACTCCACTAT TCONS_00118799 TCONS_00118800 TCONS_00118801 . 5' 35972 TCONS_00118799 TCONS_00118800 TCONS_00118801 . 5' 35972 EMBV3_35195 CCGACCTTGAAGAGGCCTTTGGGGTCATTTCCTGTGGCCTTCCTTAGAGGTGCAGTTTTT Gene GeneID:519181|FUK:NM_001100382:109_cdna Constitutive 0 NULL GeneID:519181 18 GENE FUK NULL fucokinase EMBV3_01850 TGCGTAACGGACCTAAGGATGACTTCCTGCACTGTGCCATCGACTGCCTCAACCTAGCCA Gene GeneID:527160|LOC527160:XM_002690465:366_cdna Constitutive 0 NULL GeneID:527160 10 GENE LOC527160 NULL similar to CG9426 CG9426-PA EMBV3_23975 AACGGGTAGAAACATTTTCACTGCTTCAGGGCTCTCATCTGTGTGTCGTCTTATGGCTCC Gene BVT0102_042516 + 0 NULL GK000016.2:33188177-33290066 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069053 TCONS_00069056 TCONS_00069055 TCONS_00069057 TCONS_00069052 TCONS_00069054 1 XLOC_041850 Coding TCONS_00069053 XLOC_041850 Coding Coding PPPDE1 16:33286860-33331173 = TSS51562 3897 1 TCONS_00069053_2 178 5 0.912168261419029 0 1.47504105534693e-15 1.94684734824638e-05 0 0 0 9.09777703329179e-06 0 2.75688409628806e-13 1.29047901984591e-05 3.2584148760585e-08 7.48683737715289e-17 6.72532883458354e-12 6.81919395181992e-06 6.33082256340983e-08 0.00782717404355603 0.00199754113023896 1.69219601614651e-05 6.28740914212635e-13 1.51517084058865e-10 4.15094318548749e-09 0.000909718418578144 0.00430510010181617 0.00379701503710624 4.40827988339175e-13 9.63459202595685e-09 4.77851875646636e-13 0.000466480696576295 7.05204119396676e-19 0.0012109575520249 XM_005216811.1 PPPDE1 PREDICTED: Bos taurus PPPDE peptidase domain containing 1 (PPPDE1), 0.0 6913 100.00 0.983320502950988 NM_016076.3 DESI2 Homo sapiens desumoylating isopeptidase 2 (DESI2), mRNA. 0.0 3727 81.69 0.983320502950988 TCONS_00069053_2 sp|Q9BSY9|DESI2_HUMAN DESI2_HUMAN Desumoylating isopeptidase 2; 4e-129 365 98.88 0.99438202247191 1 coding 0 0 1 1 -0.0580370106437606 0.696444297499691 -0.0170492987278936 0.736369133680148 ACTGCGAGCACACAGGAATGAGTCCAGACGTTGGTTTGCGTTTAATCGCCACTGAAATAACCGTACTGGATGAACGAATACACCTCTTCCATCGGAATTGGAGTTTTTCATTCAGGAATTGAAGTATATGGCAGAGAATTTGCTTATGGTGGCCATCCTTATCCCTTTTCTGGAATATTTGAAATTTCCCCAGGAAATGCTTCTGAACTAGGAGAAACATTTAAATTTAAAGAAGCTGTTGTTTTAGGGAGCACTGACTTCCTAGAAGATGATATAGAAAAAATTGTGGAAGAATTGGGAAAAGAATACAAAGGCAATGCCTATCATTTGATGCATAAAAATTGCAATCACTTTTCTTCGGCTTTATCAGAGATTCTCTGTGGGAAAGAGATTCCTCGCTGGATCAATCGGCTTGCCTACTTCAGCTCCTGTATACCTTTTCTACAGAGTTGCCTCCCAAAGGAGTGGCTCACGCCCGCAGCCCTGCAGTCCAGTGTCAGCCAGGAGCTCCAGGACGAACTGGAGGAAGCAGAGGACGCTGCAGCCTCGGCTTCCATGGCCAGCACCACCGCGGGCTCCAGACCTGGGCGCCACACCAAACTATAAATGTCTCCAAAGTCACACATTCAGAACTGTCTGTGGCAGTTGACTATCACTAGAGAAAAGTAAAAGAATAAACGTCCTTTGGATATTTTGTATGCAAAGATGGCTCTCCCCCAAATCCCAGTTTTTCAGCTCAGGATTATATTTGTAATCAAAAACAAAACAAAACAAAGAAATCACTTGGCGCAGGAGGGAGAACTTTGTATGAAGCTGCCCTCTGTTTTTTTTACCCACTTGTAAATTTGGATTTACTTCTTCTGTTTTATACAAGCTCTGTTAAGTTATGTTTACAGTATTTTGTATCACTGTTTACAAATCTTGCATGGACTTCTGCCACCATGAAAGAAGAAAATCATGTCTTCAGAACTTAGGCAGGTAATCTTTGTACACTTCTGACCTTTGCCCGAGCTACGGCATACGTCATAGGCACAGAGGAAGGTACTTATACAGTTACCGTCACCATGACCTGCTTAAGAATTGTCTTTTAGGTTTGTCTTTGTTCTTGTTACCCTTTGGGCACCAGGATGCACAGAGGTGAAGGAGCACACACAGCCCTAAGGGCTCAGGACCTTGGTCTTCGTGAGAGGTGCCCGAGCCCAGGTGCTCTTAGCGCGCCTTCCACTCCGAGTAGCACATCTCCCAAGGTTCCCGCTGAACGGTTGCTTTCATCCCAAATATCCGTCCACCTCCACGGGGTGGTGCACTCTCGTGTCAGTCTGGCTTTGATGCCTCTGATTCTGTAAGATGTTTTTCGTTAAAGATACTCTTGCTGGTAACAAGTGTTTTTGCACATGCATTGGTTGGGGGGCTTCATTTTTATTTTAGTATATATCGATTTCCTCCCCGCACAGGATTTTGTACGTGGGGCAGGAGTATCCTTAGTGGTAGCCTTCTGAGTAGCAGTGTGAGTTGACATTCAACTGCTTTTAACTATTCAGGCTACCTTTTATACTACATCTTGAAAACTAGAGTCTAAATGAACACTTTCCAAAAAAGTGAATACTTGGATATTTTAAGCATTTTATGTTCCCTACCAGAAAGACTATGTTGAAGTTTGTTAGTTTGTTATGGGAGTAGTTTCACCTCGTAATAGAAAGCCTAGTCACATTGACCTCGTGTGGAAAACACATATTTATGTGTCTTAGACTTCGTCTTTTTCTGTTCTCCCAAATGTGTGTGTCTTACATAACCTACTCTAAGAACGAAGTTGTCACCGCAGATAGGTCCTCATTAGCAAGGAGTCTGTCTGCTCACGTCTACTCCCAGTTTGACCCTTGGATGTAAGAGCCAAGTCATTACATGTCAGATTCAATTTTTCTGCCTTAAGAATGAATGTCCTATATAAAATATTGGATGCAGTGTATAAATTATCCAAGGCAGTGACTTCAGCTTTATATATATTGTTAGTTTTAAAATCATCTACATTTATTTAAACTTCTAGATGGGATTGTTTGCTATTACTCTTTGTAAAGATACATATCTTTCAGTAAACTACATTTTTAACTTTTCCATAAGCTGATTTTGAGTCGTTTTATCAAATAAAGCACACCCTATTCATAGGGAAAATAAACCTTGGGTTTGACCTGAGGAAAATGAAGCCACTTAACCTAATCACGCTTTTGACTGTTCTGCTTCTGGAGAGGAAAGCCTTTATGAGTTATTCTCAGTTCTTTGAGAGGGGCAGAGCACTTGTTTTAGGAGATGGGCCAGAAAGGAATATATGATTGTTATGAGACGTTGACTCGGTTCAGGTCTAAAAGTGAAATTGAGAATAAAATGCAAAGACTCTGATAGTGAATCAGTTCACTCAAAGAAGAGTCCTATCCTAACCTAAAACTCGGGTTAGTGATAAATGTTTAGTGCAGTTGCTTGGGATATTTTAAAAAAATAATTTGGTGGATTCCAGTTTTCTTCTTGTCCATTCAAATATACACGATTTCAAGTCTGTGCTGCTGACACCCATGAAGGAGTGGCCATTGTTGAGGCACTTCTTGGTGAGTAGCCAGGAACCTTCTACCTTTGCTCATCCAGATTCCAGCACCTCAGCACACAAATGATTTTATTGTGATTTTGTTGTATTTGTTTTCATCTGCAGCAACTGGGGTTTAAAAATAGTGTAAAGGGTCTTAGTAAAAATAAATAATGGCCTAAAAGGCCAATTATCGTAGAATCAGCCCATAAAATTCTGGACATGAGATTGTTGGCAGTCTAATTGTACTTGAGGTTGAGAAAATAAGTGTCTTTAGAAAATCTCATTTAAGTCCGTTTGTTCACTGCAGTTCAAAATTGAGGATGAATTTAATTAACTAGCATTTAGCCACTTTCCCTTGCCCTTGAAGGAAAAGCCTCTTGTTGTCAACCTGATTTTTGTTAAGAAAAATCCTGTATAAAAAACCAGGTCATTAAGATACATGTGATACGATGGCATCAGATGTTCTCTTTGTAGCTGTAACCAAGTGATACATTTCTCATGGTGGGTTGGACAGTAATAGTGTTAAAGAGGGCCAGGAGCTGCTGGTTTCTGCTGTTTGTTCTCAGTGCCCTTTGGTTTCATTTTTTTTCTCTTTTCAACCCTAAGAAGTGGGCATCAGTTTTGGAAAGCGTGGCCTGTGGAGTGGTAGAAGGCAGTGATGCAGCAGTAAAGAGAGCCTCCACTTGATGCCTGAAATCCAGCCCACTGTTGCTCTGACCCACAGCAATAGTGCAAGTTACCTTCACCAGCATTTGTACAGAGCAGGGAATTCTGGTTTTCGCCAATTGATAGCATTGTGTGTATGAGGAGATTCAACCCTACAGACAGCTGCGGGCCTCTGTATACATGGCTTCTTTCCATCACAAAACGGGTAGAAACATTTTCACTGCTTCAGGGCTCTCATCTGTGTGTCGTCTTATGGCTCCATTTCTATAAGATAACTCTGTAATTTTGATACATGCTGTATTTTCTTTCAATGACTAAGTTTAAAAGGCTTGGGTTCTGTTCAGCAAATTGGCCATACTGCCATTGTAGCCCTTCCCTTCAGTATGGTTTAGCGTGCAGCTCAGTCATTAGACTTTCCTTGTCTACCCAGTCAATACACATCTTCACTGTTTGAAAGGTGTTACAGCAGTTGGAGAATCTTCATGAACCTGAAGATTATTTCTTGTGAATTTGAATGCAAATGTACTGTCATTCATAGTGTTTATATGAAAAAATACCAGGAATCTTCACTTTTGCTACCTTGATATAGCATTGGGCTATCGTGTTAACAACATTGAAATACATCAATTTATTAAAAAATACTTTTATAAGAAATG EMBV3_31993 GAACTGAGGTCAAGCCCGGTTTCCTAACTGACCCCTTCCTGGGCCTGTCCCCAAGACAGG Gene BVV0101_051225 - 1 EMBV3_07594 GK000011.2:103823542-103840108 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39928 AGCCCAAATACCCTCGGAAGAGCGCGCCTAGGAGAAACAAACTTGACCACTATGCCATCA Gene GeneID:507168|RPL23A:NM_001045958:67_cdna Constitutive 0 NULL GeneID:507168 19 GENE RPL23A MGC140350 ribosomal protein L23a EMBV3_39226 CCACACGTCACTATCTACTTCACAGCTCCTCCACAGAAAAGACAGCAGATCTCAGCTTCC Gene BVT0102_090653 + 1 EMBV3_02453 GK000006.2:72277700-72468294 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15707 CATCACTTGTTGATGGAGAGAGAATGGAAAGCACCATCTTGACCAGAGGAGGCATAGGGG Gene BVT0102_187425 + 0 NULL GK000009.2:92525552-92570120 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42024 GGACTAGTGGCTGCTGCTTGTGCCTGTGGCTTTATTGTCGCACAGATCATCACATCCTTG Gene GeneID:513884|LOC513884:XM_002685947:127_cdna Constitutive 0 NULL GeneID:513884 3 GENE LOC513884 NULL similar to putative olfactory receptor 10K1 EMBV3_03348 CTGTCTGTCCGAGTGTCTTCTCTCTGTCCCTGCATGTGTGGGGGTGTGTATGTGTTAAGA Gene GeneID:784489|LOC784489:XM_002686480:553_cdna Constitutive 0 NULL GeneID:784489 3 GENE LOC784489 NULL similar to polycystic kidney disease 1-like EMBV3_37993 CTCAACAAACTGGACATAAAGAAAACAAACTTCATTAAAATAAAGGTCTTACATGACAGG Gene BVT0102_431401 + 0 NULL GK000006.2:52441101-52613259 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01114 TCCTTTATCCCGATCTCAGTGTGTGGAAAGGTATTCACAGTTTTATATGGAAGATAGTTT Variant GeneID:511397|ZCCHC4:XM_002688158:40_cdna 351^707 2 EMBV3_39185 GeneID:511397 6 GENE ZCCHC4 NULL zinc finger, CCHC domain containing 4 EMBV3_07508 TGAGAGGTTCGTGCTGGGAGTGGACATGTTTGTGGAAACCGTGTGGAAAGTTTGGGCAGA Gene GeneID:538558|BRI3BP:NM_001099087:243_cdna Constitutive 0 NULL GeneID:538558 17 GENE BRI3BP MGC152473 BRI3 binding protein EMBV3_24097 AAGTGGCAGGGGATCGAGGCCATTTTGGAAGCTTACCAGGAACACGTGGAAGAGCAAGAT Gene GeneID:538506|LOC538506:XM_002694851:781_cdna UTR3_Alt 2 NULL GeneID:538506 18 GENE LOC538506 NULL similar to Genetic suppressor element 1 EMBV3_43014 GAAGCTGGCAGGCTATAGTGCATAGGGTCGCGAAGAGCTGGACGTGACTGAAGCAACTTA Gene BVV0101_019763 + 0 NULL GK000005.2:22334250-22526738 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00197825 1 XLOC_119486 NonCoding TCONS_00197825 XLOC_119486 NonCoding NonCoding - 5:22434405-22434753 - TSS147393 348 1 TCONS_00197825_1 36 0.341954022988506 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000185202941362976 0 0 0 XM_005216660.1 NUCKS1 PREDICTED: Bos taurus nuclear casein kinase and cyclin-dependent kinase substrate 1 (NUCKS1), transcript variant X1, mRNA. 1e-26 123 83.46 0.35632183908046 0 noncoding AAGAATCTCCAAGTCACAAGAACATGACTGATTCAGGTGTAGTTTCTGAGTGCCTACTCTATTCCTCACCACTAAGAGTACTCTATGCATCTCAAACAGGGTCTTGTATACAGCAGGGCCTTAATGAACACTGAGTTCATTAGTTAATTATTAATTAATGTTACAGGCCACAGCAACCCACTCCAGTATCCTTGCTGGGAAAACCCCATGGGCAGAGGAAGCTGGCAGGCTATAGTGCATAGGGTCGCAAAGAGCTGGACGTGACTGAAGCAACTTAGCACGCACACTTGTTTGCTACATGATGTCACACAAGACCAATGAACTTAATGAATTAAAGTCTGTGCTTTA TCONS_00191006 . 5' 91986 TCONS_00191006 . 5' 91986 EMBV3_01968 TTGAAGTGTCTGGTATGGAAAAGTGCAAGCTGCATGAGTACAAGGACGACAGAAGCTCAC Gene BVV0102_061921 + 0 NULL GK000014.2:37083133-37549338 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053270 TCONS_00053276 TCONS_00053279 TCONS_00053282 TCONS_00053278 TCONS_00053280 TCONS_00053281 1 XLOC_031686 Coding TCONS_00053270 XLOC_031686 Coding Coding EYA1 14:36985896-37377569 j TSS39336 1425 1 TCONS_00053270_3 291 13 0.996394942707163 0.00146106747244846 0.00106061607482849 0.00147289168742772 0.00180673982546119 0.000894481682557863 0.00124656439624779 0.000806996895218033 0.000771830219755774 0.000959455528405163 1.14539618789801e-19 1.67897526799037e-250 3.63473752864393e-135 0.000137442641423526 6.41008821506698e-05 0.000222065851999605 1.36412428431241e-26 3.25758762552096e-52 1.88787105913498e-227 0.00127045730036217 0.00496379384511792 0.00072919128625258 2.96458454021308e-69 3.45414338849194e-73 8.52655113311884e-61 0.00232237317385638 0.00324393840839865 0.00180736664444741 2.4541411256437e-77 2.23909445055735e-27 9.05901291423962e-25 XM_003586894.2 EYA1 PREDICTED: Bos taurus eyes absent homolog 1 (Drosophila) (EYA1), 0.0 1692 99.68 0.663859649122807 XM_005251182.1 EYA1 PREDICTED: Homo sapiens eyes absent homolog 1 (Drosophila) (EYA1), 0.0 1400 91.68 0.665263157894737 TCONS_00053270_3 sp|Q99502|EYA1_HUMAN EYA1_HUMAN Eyes absent homolog 1; 2e-165 477 94.44 0.896907216494845 0 coding CAAAATGCCGTGATAACTTTTTCATGGCTTGCCTAATGCCTAATGATTAGAGAAGAAGAGATAGAAACCAGCTGGTTTCACCTTCCGCCAGGCTAAGACTGAAGCGATGTATCTTATCAGACAATTGAAACCACTTGCTCCAGCTCTGACCCCGTGCTCCAAAGGTCAAGGAGAGTCTGGGCAGAAGTGGTTGGATTTGACCTTGTTACTTCAAAGCGTCCAATGCACTCTTAAAGATAAAGGAAAACATCGCTGCCTCAAAACAAATGGACCGCCGGCTCCAAGCAATCATTTGAAGTGTCTGGCATGGAAAAGTGCAAGCTGCATGAGTACAAGGACGACAGAAGCTCACATATCTCAGCATTGCAGAGTGGCTGCTTGTCGCAGGGTGTCACCTGACCCCAAGGACAAGTCCCCGAGTACCTCCTAGGAAGAGAACCTAGCCAAGCACACCAAGACATCTGGTGTGTTGGGAGGTGCTGGGGTGTTGGAAGTCTTTGAAGAAGTGTGGAGCTAATAGCCCATATATAATTCGGAAGAAGAAATCTTCAATGGAAGACCCCCGGGGGATAAATGGACAGTCTGTGCAAACATCTCAAACCAGTTCAGATGTTGCTGTTTCCTCAAGTTGCAGGTCTATGGAAATGCAGGATCTAACCAGCCCGCATAGCCGTCTGAGTGGTAGTAGTGAATCCCCCAAACTCGATAACTCTCATATAAATAGTAATTCCATGACTCCCAATGGCACCGAAGTTAAAACAGAGCCAATGAGCAGCAGTGAAATAGTTTCAACAACAGCAGACGGGTCTTTAGACAATTTCTCAGGTTCAGCCATTGGGAGCAGCAGCTTCAGCCCAAGACCAACTCATCAGTTCTCCCCACCACAGATTTATCCTTCCAACAGACCATACCCACATATTCTTCCTACCCCTTCCTCACAAACTATGGCTGCATATGGGCAAACACAGTTTACTACAGGAATGCAACAAGCTACAGCCTACGCCACGTACCCACAGCCGGGACAGCCCTATGGAATCTCCTCCTATGGCATCAAGACTGAAGGTGGATTGTCACAATCTCAGTCACCTGGGCAGACAGGATTTCTCAGCTATGGCACAAGCTTTGGGACCCCTCAACCTGGACAGGCACCGTACAGCTACCAGATGCAAGGTAGCAGTTTTACAACATCATCAGGATTATATACAGGAAATAATTCACTCACAAATTCCTCTGGATTTAACAGCTCACAGCAGGACTATCCATCTTATCCCAGTTTCGGCCAGGGTCAGTATGCACAGTATTATAACAGCTCACCGTATCCAGCACATTACATGACGAGTAGCAACAGCAGCCCAACAACGCCGTCCACAAATGCCACTTACCAGCTTCAGGAGCCACCATCCGGCATTACCAGCCAAGCAGTGG EMBV3_35933 CTCAGTAGCTGTGGTACATGGGCTTAGTTGCCCTGAGGCATATGAGATCTTCCCCGACCA Gene BVT0102_044723 + 1 EMBV3_03134 GK000005.2:55179155-55841970 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26053 GATGTTTGTACTTGGTAAGCGTCAGCCCACACCTGTGAAAATTCTGCAGCCATGTCCCTC Gene GeneID:767837|TMEM88B:NM_001076958:231_cdna Constitutive 0 NULL GeneID:767837 16 GENE TMEM88B MGC139558 transmembrane protein 88B EMBV3_18318 AGACTCTCCCAGGATGGAACACAGACATATCAAATGCAAGGACTTTTAAGGAACTACCTA Gene GeneID:522529|ADSS:NM_001167809:59_cdna UTR3_Alt 3 NULL GeneID:522529 16 GENE ADSS ADSS2 AMPASE2 adenylosuccinate synthase EMBV3_34619 GTTAATGACGAAGACGTCAGGCTCATGTTATGGGATACAGCGGGTCAGGAGGAGTTTGAC Gene GeneID:618588|RAB23:XM_002697167:185_cdna Constitutive 0 NULL GeneID:618588 23 GENE RAB23 NULL RAB23, member RAS oncogene family EMBV3_10398 GGCCACCACCAGATTATAAAGACCAAAGAAGAAATGTGGGCAACATGCAACCAACTGCTC Gene GeneID:521194|MAML2:NM_001098050:11_cdna UTR3_Alt 2 NULL GeneID:521194 15 GENE MAML2 MGC143419 mastermind-like 2 (Drosophila) EMBV3_40688 TGCCTCCTACAAAGACCAGTGGATCCAGAGGTGAAGGTGGTGAGTCTGAAGCCTGAGGTG Variant GeneID:360194|POFUT1:NM_001043343:800_cdna 618^767 1 EMBV3_34091 GeneID:360194 13 GENE POFUT1 NULL protein O-fucosyltransferase 1 EMBV3_11279 CATGAGCATGGAGTGCAGAGGGAGGTGACATTCCATCGCCAGGAGAGATATATTGGTATG Gene BVT0102_157841 + 0 NULL GK000001.2:80675984-80788013 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004163 TCONS_00004174 TCONS_00004164 TCONS_00004169 TCONS_00004172 TCONS_00004165 TCONS_00004168 TCONS_00004173 TCONS_00004167 TCONS_00004170 TCONS_00004166 TCONS_00004162 TCONS_00004171 1 XLOC_000983 Coding TCONS_00004170 XLOC_000983 Coding Coding ST6GAL1 1:80785705-80885380 j TSS2100 4163 1 TCONS_00004170_1 405 0.106173432620706 7 0.958304071272348 0.00114719016915336 0.000318151133460914 0.00228524370352579 0.00139289839507121 0.0012949535299979 0.000277068791518349 0.00107795799198007 0.000754908319851613 0.00165131939879533 0.000168651380273329 6.48546815593963e-06 9.23974368032066e-21 2.59682397047879e-05 0.000935305351593268 0.000422828667140821 3.83428629814154e-31 5.17843365809534e-12 3.56913263022274e-33 0.00218097158845917 0.00180657497231792 3.96656274266561e-48 2.13528172741699e-39 9.47191424517067e-38 6.65826169879223e-137 0.00187461852864469 0.00148068464847258 0.000221275657917241 1.16743529291417e-25 5.20387353012783e-14 1.91276636382527e-14 XM_005201460.1 ST6GAL1 PREDICTED: Bos taurus ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 (ST6GAL1), transcript variant X5, 0.0 7189 99.92 0.959164064376651 XM_005247717.1 ST6GAL1 PREDICTED: Homo sapiens ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 (ST6GAL1), transcript variant X1, 0.0 1656 81.15 0.417967811674273 TCONS_00004170_1 sp|P15907|SIAT1_HUMAN SIAT1_HUMAN Beta-galactoside alpha-2,6-sialyltransferase 1; 0.0 693 82.56 0.992592592592593 1 coding 1 1 1 1 -0.138372933551752 0.273859236605138 -0.0565921375817499 0.263485243892193 ACTGAAATTACTGGCCAAGCTGGAGGGAAGCATACTCTCCAATATCCACACACAGCTGTAAGCTTTGGCAAGAGTGGTTGCAGGATCTGGGAAGAGAGGAGATTGCGGGTGCTGTTTGCAGTGTGAAGATTCCACAGGTGGACTTGGGATGGTTTTTGATCATCCTGAGAAGAATGAGCCTTGGCCTCCAGACCCAGTAAAACAGACATCCATGGAGAACAGTGTTCGTTCCTGAGGACCTGGAGGGCTTGCAGCCCAGGAGGATTAGCTAGAAGCAGGCATATTTTCCTGCTCAGAACAGCGTGGTTTCCTTGAACACGTCCTTCATTATGACTCGCACCAGCTTGAAGAAAAAAGTCTTCAGCTGCTGTGTGCTCATCTTTCTCCTGTTTGCCATCATCTGTGTGTGGAAAGAAAAGAAGAAAGGGAATTACTATGAGTTCCTTAAACTGCAAAACAAGGAATACCAGGTGTTGCAGGGCCTGGAGAAACTGGCCGTGAGCTCTAGTTCCCAACCTGTGTCCTCCAGCAGCACCCACAACCCCCAGAGGAACATCCAGGCACTCGGTGGTCCCAAGGCCAAGTTGAAGGCTACCTTCCAGGTGTGGGACAAGGACAGCTCCTCCAAAAACCTTGCCCCCAGGCTGCAAACTATCCGGAAGAATTATCTGAACATGAACAAGTACAAAGTGACGTACAAGGGGCCAGGGCCCGGGGTCAAGTTCAGCGCAGAGGCCCTGCTTTGCCACCTCCGGGACCACGTCAACATTTCAATGATAGAGGCCACAGATTTTCCCTTCAACACCTCTGACTGGGAGGGCTACCTGCCTCAGGAGGACATTAGGACCAAGGCTGGGCCGTGGGGCAGGTGTGCTGTGGTCTCTTCAGCAGGATCTCTGAAGTCCTCCCGGCTGGGCCGAGAAATAGATGATCACGATGCAGTCCTGAGGTTTAATGGGGCACCCACAGTCAAATTCCAACAAGACGTGGGCACGAAAACCACCATTCGTCTGGTAAACTCTCAGTTGGTCACCACAGAAGCAGGCTTCCTCAAAGACAGTTTGTACAATGAAGGAATCCTAATTGTGTGGGACCCATCTGTTTACCATTCAGATATCCCAAAGTGGTACAGGAATCCCGACTACAGTTTCTTCAATAACTTCAAGAGTTATCGTAAGCTGCATCCTGATCAGCCCTTTTACATCCTCAAGCCCCAGATGCCTTGGGAGCTGTGGGACATCATTCAAGAAATCTCCTCGGAGCTGATCCAGCCAAACCCCCCATCCTCTGGGATGCTTGGCATTGCCATTATGATGTCACTGTGTGACCAGGTGGATATTTACGAGTTCCTCCCATCCAAGCGCAAGACTGACGTGTGCTACTACTATCAGAGGTATTTCGACAGTGCCTGCACAATGGGCGCCTACCACCCACTCCTCTTTGAGAAGAACATGGTGAAGTACCTCAACCTCGGCACGGACGAGGACATCTACCTGCTTGGAAAAGCCACGCTGCCTGGCTTCCGGACAATTCGCTGCGGAGCATAAGCTCCCCAGCCAGGCCCCCTCACCCTTCCCCACTGGCATTTTACAGCTGGTCTTCTGGCCACCCCAGGCCTGGGAAGGAAGACTGTGTTCCTGAATAATCACAGCCCACACTTCAGGCAGCAAGAGCCCTGGGGCTTCAGAAACTCAAGGGTAGGGCTCCCAGCCCAGCCTGCCCTGTTGTCACGGGAGTGTGTGAACCCAGAGCCTCCTGTCTCACTCATATATACCCATTTAGCATTCCCTCCAGAAAGGGTCCTCCCACCCGCAACCTAGGTAAACGCAAGATCCACCTTTCCCACCAGGGCTGCCAAAACTGGTCTGCTTTCCCCACCAGAATGATGTTGTTATTGCGAACCAGGGAAACAGGAAAAAAGGTACAGTCTCTGTCCTCACGGAGAAGGTGATGGCACCCACTCCAGTACTCTTGCCTAGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCGAAGAGTCAGACACGATTGAGCAACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCGTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGCAGCTCCATCCTCAAGTTGCCTATAGATCAGTGCGAGAGACCAGATAGATTCAGTGTGCTTAATGCACTGGGGCTTGTGGGTGTGGACTTGCTGTGTGGCTTTTTTTGCACCCAGGAGGGAACACACCCTTCCCGTGTCAGTGGGTGATAGAGGGCTTCACGGAGCTGGGGGCTGTGAAGTGTAAAATTCACTTTTTCCTTTAGAAAAGGAGAAACATGTCAAGCAGACTTTGTCTAAGTCATCTGAGATGTGTTTTCCTATCTGCCTTTATTACCTGTATTTAAGAACTGCCTGAGTTTACAGGCTCAAGGTACTTTTTGAGGAACCCCCCTCATGTCTGAGGCATCAACTTAAGCCCCATACAGATGCCAGGCAAGCCAGATGCCAAAACCCTGATTTCTCCAGGCTTGCCTGGCCTGAGCCTAGCCTAGCCTACCAGCTGGGTGTGCACAGCCTATCCAAGTCTTCCTTTTTGATGCCCACCCCCAAACCTCCTCCTGCCATCCTGTTTTTCCCTTTAATCTTCCCACTTCCAAATTACTTTCAAGCATTTTACACTTTAAAATTTCCTGACTTTTGTTTTTAACCTTCATGGGCCTTTTGTGAAAGGCCTCTCAGGGAGTGGGAACGTGGTTTCCTAGGACTTAAGAGTCGCTCTCAGAGGTCAGAACCTTGGAGATCATGACTATTTCTCACCAGGTGTATCAGAGCACTGTGCCCCCATCCCCGCCTGCAAGGGAGCAACATCAAAGCCTCTGGACAGAGGTCTGTCTGCTGTGGTCTGTCCACACACACTCTGGACCATTGTGCTAAGTCCCCTCCCCTGATGGGGAGCCACACTAGACTGGCCCAGGCTCCTGGACTCCTGAGCTAGCCCTATGTGCTCATGGGTCTTGAATGTCTGAGGTCCAGACCAGCTACTGTGGAGCTGGAGTACTCATTCATGGTCAAACCGCTGGCTTGTGCAGGCAGTAGAAAGAGCTCTGGAGTGAGAAGCCCTGGGTTTTCAAAGTGATGCTCCCCTATTACTCGCCATGCCACCATGGGCAAATTCTCCTCTCTGAGCCTATTTCCACATTTGTAAAATGGGTGGTGAGCCTGCCTCACAGGTGCTCTGAGGGTTACCTGGGAGAAGGCAGGTGCTCAGTGCATGCTGGATTTCTCCCTTCCTTTACTAAGATCCTGCCCTGTGCCCACACCTGGCAGCATCCTGCTGTGAAGCAGGCCAGAGAGTGGGCTTTGTCCTCAGGGAATGTAATGTCCTATTGGGAGACAATAATACCTACCCTGCTTGGAATACCCTGGCAACCATCCGAGGGAGTGGAGGGTGCAGAACGTGTACCTGCTCAGGCCTGATCCGCTCTGGGATGGGCAGAGCACTTGGGCCACTGGCCACTGTGACCCCAGGCTTTTCCACGTCTGTGGGCCCAAGAATTCCTGGGAGTCCTTGAATCATGAGCATGGAGTGCAGAGGGAGGTGACATTCCATCGCCAGGAGAGATATATTGGTATGGACACTGAGACTACACTGGGTAGATTCTAGCTTTTATATGTTATATTAAGAGATCAAGTTAATTTAATTGTGCTTTCTCAACCTGGAAACGGGTAGAATGCAAATAAGATGTGGATATTCTCGTTAGTCTGATTAAATGTTTTATATTTGTGACAGGCAATTTAAAAATTATGACTGTGTCTTGTAGGAAATCCACTGTCTCTAAGCTGTTCTGTTTTATTCAGTAGCCATCTGTTCATTCTCTATCATGAAGTCCTCAAATCTTTCCATCTCAATCAAATAAGCTATTGATATTGGCCTGGAGTTGAGATGTCAGTCTCAGAAACTTCTGAATCATGTCCTAAGCTATTTCTGAATTATCCAAAGATTATGTAAAATTTTAAAATAAATGATTGTTCAAAACTTGTATCCCTCTTTTCTTGTTAAGGGGACA EMBV3_17280 GTTTTACCACACTTTCGTCTCACTCTTCTGCAATATATCCTCTGTACTAATGGCAGAGTC Gene BVV0102_142730 + 0 NULL GK000020.2:33669804-33688302 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34911 GCTTGCATAAAGGTTGGGCTGAGTGTCCTGGACTACAGACTCTGTTGCCTTGAATATAAC Gene GeneID:532986|BPTF:XM_002696124:233_cdna Constitutive 0 NULL GeneID:532986 19 GENE BPTF NULL bromodomain PHD finger transcription factor EMBV3_22556 GAAAGCAGAAGACTTACCTGAGGGGGATCAGGAACGTTTCAATAGTCTGTTCTCTCTGAG Gene GeneID:509563|DSCC1:XM_002692811:130_cdna Constitutive 0 NULL GeneID:509563 14 GENE DSCC1 NULL defective in sister chromatid cohesion 1 homolog (S. cerevisiae) EMBV3_39998 TTTCGTAGAGACCTCAGCCAAGACACGCCAGGGTGTGGTAGAGGCCTTTTCCCTACTCAT Gene GeneID:540065|ERAS:XM_002700076:153_cdna Constitutive 1 NULL GeneID:540065 X GENE ERAS NULL ES cell expressed Ras EMBV3_24576 CTGAGGGGCCCAGTGTTCCAAAAACGTCAGGACTGGTCTGAACTGTGAAACCTGAAGGAA Gene BVV0102_207891 + 0 NULL GK000008.2:59695911-59724478 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227747 1 XLOC_138309 NonCoding TCONS_00227747 XLOC_138309 NonCoding NonCoding - 8:59700739-59715083 - TSS169955 465 1 TCONS_00227747_1 56 0.238709677419355 4 0.967858885867671 0 0 0 0 0 0 0 0 0 0 0 0 1.85115151489232e-05 0.000829521960882482 0 0.000624790443022275 0 0.000107918011201531 0 0 0 0 0 0.000432635769661635 0 0 0 0 2.08800279634609e-05 1.29295454210785e-05 XR_231901.1 LOC101902931 PREDICTED: Bos taurus uncharacterized LOC101902931 (LOC101902931), 8e-125 450 100.00 0.533333333333333 0 noncoding 0 0 0 0 0.0353280616720356 0.78982174388689 0.0123071097317685 0.795727904080559 TAGCAGACAACAGCTCAGGACGCTGAAAAGGATGTGTCGAGTGAAGGGCCAGTAACCCAGCTCCAGTTGCAGCACCGCGGGATCGACACGCTCCATTCCCCTGCACCTGAGGGGCCCAGTGTTCCAAAAACGTCAGGACTGGTCTGAACTGTGAAACCTGAAGGAACCGCCCCTCCGGGAGGGATTGGCGTCCTCGGGAGGGTGAAGGTCATGTCCAGGAGGATTGTTTCAGCATCAGTGCAGAAGGAAGAGGAGCAAAGGGAGCATTTGGTAGCACTGTGCAGCATGTGGGATCTTACTTCCCTGACCAAGGATCAAATTTGCACCCCCTGCATTGGAAATGTGGAGTTCTCACCACTGGACCATCAGGGAAGTCCCTAGCTATGGGTTTTTTAAAACATAAATATTCATTGTCATGTTGGGGAATTTTCCTGCTATTCCTTATTTCTGAGTTTCTGGCATAAA TCONS_00225470 TCONS_00225472 TCONS_00225473 r 3' 3647 TCONS_00225470 TCONS_00225472 TCONS_00225473 r 3' 3837 EMBV3_28187 CCAGATAGAAAGGATTCACCCAGGGGATTTCAAGTCAGAGTCCAGGAACAAAGTTATACC Gene BVT0102_271374 - 1 EMBV3_32666 GK000009.2:25279439-25474383 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37193 CTCAGCTGCCGCTGACCACGACCCAGCAAGAGCCCAACCCGGGGATGGCCTCGAGTGAGA Variant GeneID:444863|GYPC:NM_001002886:2_cdna 157^201 1 EMBV3_18789 GeneID:444863 2 GENE GYPC GPC glycophorin C (Gerbich blood group) EMBV3_30968 AGGGTCTTACACCATGAGCAAGTGAGATATACCCCAGGAATGCAAGCTTGGTTTAATGAG Gene BVT0102_079949 + 0 NULL GK000024.2:58346781-58486545 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139452 TCONS_00139455 TCONS_00139453 TCONS_00139454 TCONS_00139459 TCONS_00139457 TCONS_00139456 TCONS_00139458 1 XLOC_084899 Coding TCONS_00139456 XLOC_084899 Coding Coding MALT1 24:58326293-58349281 j TSS104287 4138 1 TCONS_00139456_2 508 0.25060415659739 9 0.820376734676121 0.00232610207437906 0.0016861197099655 0.00190523292902911 0.00212498674573927 0.000135871473496534 0.00077102956375091 0.000359637667267822 0.0011014176862062 0.000918909340895532 0.000521179497354523 1.31044979294847e-13 4.73426717569995e-05 2.69562876512941e-05 2.00037138655465e-20 7.79410694916215e-14 6.54470961509683e-14 0.00041460491506298 1.45364668967509e-19 0.00113275908881131 0.0022266213373546 0.000671532602560068 0.000735247358119375 1.85807252867917e-21 4.36658834009403e-15 0.00199758840537279 0.00147480980094089 0.00126618415473833 0.000203119363148568 1.04527771978682e-15 2.99272586243203e-05 XM_581210.7 MALT1 PREDICTED: Bos taurus mucosa associated lymphoid tissue lymphoma translocation gene 1 (MALT1), mRNA. 0.0 3894 100.00 0.521507974867086 NM_006785.3 MALT1 Homo sapiens mucosa associated lymphoid tissue lymphoma translocation gene 1 (MALT1), transcript variant 1, mRNA. 0.0 2163 79.44 0.600048332527791 TCONS_00139456_2 sp|Q9UDY8|MALT1_HUMAN MALT1_HUMAN Mucosa-associated lymphoid tissue lymphoma translocation protein 1; 0.0 912 90.74 0.954724409448819 1 coding 0 0 1 1 0.0182056036810747 0.906617601219573 -0.0149238306709627 0.794117382775616 GTGGGTTTGATCCCTGGGTCAGGAAGATCACCCAGAGGAGGAAATGGCAACCCACTCTAGTATTCTTGCCTGGAGAAACCCGTGGACAGAGGAGTCTGGTGTGGCTGCAGCAAAGGACAAGGTTGCTCTTTTGATAGGAAATATGAATTATTGGGAGCATCCCAAGCTTAAAGCTCCTTTGGTGGATGTGTATGAATTGACCAACTTGTTAAGACAGCTAGATTTCAAAGTCGTTTCACTGTTGGATCTTACTGAATATGAGATGCGTAACGCCGTGGATGAATTTTTACTGCTTTTAGACAAAGGAGTCTATGGGCTGTTGTATTACGCAGGACATGGATATGAGAACTTCGGGAACAGCTTTATGGTCCCTGTGGATGCTCCAAATCCGTATAGGTCTGAAAACTGTCTGTGTGTACAGAATATACTGAAACTGATGCAAGAAAAGGAAACAGGACTCAACGTGTTCCTGCTGGACATGTGCAGAAAAAGAAATGACTATGATGACACCATCCCAATCCTGGACGCCCTGAGAGTCACTGCCAACATTGTCTTTGGATATGCCACGTGTCAAGGAGCAGAAGCTTTTGAAATACAGCATTCTGGGTTGGCAAATGGAATCTTCATGAAGTTTTTAAAGGATAGGTTATTAGAAGAAAAGAAAATTACTGTGTTACTGGATGAAGTTGCAGAAGATATGGGTAAATGTCACCTTACCAAAGGCAAGCAGGCTCTAGAGATTCGAAGTAGCTTATCTGAGAAGAGAGCCCTCACTGACCCAATCCAGGGAGCAGCACATTCTGCGGAGTCTCTGGTGCGAAACCTCCAGTGGGCCAAGGCACACGAGCTTCCAGAAAGTATGTGTCTTAAATTTCAGTGTGGTGTTCAGATTCAATTAGGATTTGCAGCCGAGTTTTCCAACGTCATGATAATCTATACGAGTATAGTCCACAAACCACCCGATATATTAATGTGCGATGCCTATGTTACTGACTTTCCACTTGATCTAGATATTGATCCCAAAGATGCAAATAAAGGGACCCCTGAAGAGACCGGCAGCTATTTAGTATCAAAGGAGCTTCCCAAGCACTGCCTGTACACTAGACTCAGCTCACTGCAGAAATTAAAGGAGCATCTGGTCTTCACAGTCTGTCTGTCGTATCAGTACTCAGGACTGGAAGACACAGTAGAGGAAAAGCAGGAGGTGAACGTGGGAAAACCTCTCATTGCTAAACTCGACATTCACCGGGGCTCGGGGAGGAAGACGTGCTTCCAGACTTGTGTCATGTGTAACGGCCCTTACCCCAGCTCTGCCGCCAGCGCCGCGGGGGCGGCCCGCTACCGCCCACCTCAGGACTCCTTCTCCGGTGCTTACCACTCCCACCTCAGTAACTCAAGCAACGTGATGCCATCAGATGGCTGTCGCTGCAGTCGGACTGCGGACGCCTTCGTTTCAAGTCATCACACCCACCATTACTCGTGTCAGTTTGGCAGAAGCAACGTGCCAGTAGAGACAACGGATGAAATTCCATTCACTTTCTCTGATGGGCTTAGAATTTCTGAAAAGTGACTTCTTTGTTCTTGAAAGTTCTCATAATTAATAGATGTCTCATCCAACTGTACTTACATAAAGTGAGATATTAGGGGGAAAGCAAATAGATATACATGTAGCAAGAGAAAATTAGTTAACAGGCATTTCGTGGCAAACTCAGGACTTTGAGATGTTGGAATTATTTAACTACAGACCTCCTCTTACGATTTTGTGGATGGGTTAATTTGTTCTGTAAGTATGAAGTATGGACATGTATATGTTTATGTACATAACAGTGTTTTCCTCTTGACCACTCTGAAGTATGAGCAGTGGGAATGGCATTACTATAGAATAAGTCATTGTATTTCTAGAACCAGGAAAAGGACCTTGGTGATGATCAGGCTTCACCTAATTTTTGTCAGTGGGAGAAACGCACTGAGGCGTCTTCTGTGAGTTGGAGCTGAGGCCGCCAGGTTTCTACTGCAGTGTTCATTCCACTACACGTTGCCTTCCTGACAGCTTCCGAGACAAGGACAATTTCTGTAGATAGACTCAAAGACGTGTAAATAAGAATGTGTATAATCTAGGAGCGCATGAACTTTAGTTTGTGATTACAGGACTTGGCTACAAATACTAGTTAGGTTTGTGTATAAGTCTTTGTAGAACGGGCTGAAATGTCTTATTTCTTAAGGTCATGAAAGCACATGAGAAGTAATAAAATGTTTTTCTATGGTAAAGCTTTAGGCAGCAGGATAATATTGCTACTGGATAATCTTGGTAGCTGTTTACCTGAATCTTATAAACCCTGGACCTGACTTCCTTGATACATGTATTTTCTCATTGAATTTTACTGGCCTTAGGAGATAATCACCTTTGGTTCTACAAAAAGCAAGTTTAAAAAGCAGCTGGCAGTAAAAGGAAAAGGTTGAATTAGTAATTTTAAGACATCCCCAAAGAAAATTGCAGGCCTAGATGTCTCCACTGCTCTATTCTACAGACATTTAAAGAAGGCGCACCAATCCTTTGTAAACTCCTCCCAAAAGTAGAAGAGGAGAGAACACTCTCTGCGACCCCATGGACAGCAGCACACCAGGCCTCCCTGTCCTTCACCATCTCCTGGAGCCTGCTTAAACTCATGTCCATTGAGTCGGTGATGCCACCCAGCCATCTCATCTGTCGTCCCCTTCTCCTGCCCCCAATCCCTCCCAGCATCAGGGTCCTTTCCAATGAGTCGGCTCTTCACATCAGGTGGCCAGCATATTGGAACTTCAGCATCAGCATCAGTCCTTCCAAAGAATGTTCAAAGTTGATTTCCTTTAGGATTGACTGGTTTGATCTCCTTGCTGTCCAAGGGACTCTCAAGAGTCTTCTCCAACATAACAGTTCAAAAGCATACCGTAATACAAAATCAAAGACATCACAGGAAAACTGTAGAGTATTAGCTATTATGACTATAGACACAAAAAATCATCAAAACCCTAGCAAACTAAGTCTAGCAACATATAAAAAGGGTCTTACACCATGAGCAAGTGAGATATACCCCAGGAATGCAAGCTTGGTTTAATGAGTCATATATAAATTATCTTGTTATTCACCATAGTAATATTCTGCAGTGTCACTGTGAATACTAAATTAGCAAATACAGAGCCATTGCTCCTGGGGGGAGCGTGTGTGTGTTTTACACACATACATATCTCAAATAGACTATTAGACTATAACCTTAACTCCTAAAAACAATTTATCCTGGTAGATCTGTTTTGCTGTATTAAAAAAATGAGGTTCAGAAGTACTGACTGACTTGGCTGAGGCCCCCTGGCTAACGGGCCAGCGTGGGGACCCAGACCCATCGGGCGGGCCCAGAGGCAGAGCTCGCCCTGCACTGCCTGCATCTTCTGGCCATGTCTGCAGGGGAGCTGAAACAAGAAGGCAGGGCGCGGCCTCGTTTCTCCTCAGCTGAGAACATGCACGTCGGGGAGATCAACTCGTCAACCGTCTGCACACGTCCATGAATGGTCATCGAAGGGCTGCAAGTGTTGACTTGGGGATTATAAACAAACTATAAATAAGTAAATTGGCAAATTCACACAGAATCGTGAGTGAGGATCCTGTTCATAAAGAGAAAAGTGACCATTAACATTGTTTTGTTTAACTTTTCATCGTGTATTGGGGTACAGCTCATTAACAATAAATTAAAACTGGATTTTACACTTTGGGGTCACCTGACCTTGTTGTGGTCCCAGGAAATAACCTCGTTTCGGGGCACACAGTGGCATTCCCACCGGGAAGATGAAGTGTGCCTGTTGGGGACGGCCAGGTGAGCCCTCCCTGGAAGCACACCCATGGGGACGGGTGAAGAGACTGTAAGCATGTTAGGAACCAGGGGAGACTCTGATGAATCTGGGATCCAGGCTGAACTGACCCAGACACCCATCTCGTTAACCAACGCTGCTGGCGAGCTGGACGCTTAAGCCCAGAGTCCAGTCAACAGCACGTCTGCTGCCAGCAAACTCTCTGACAGAAGGTCTTTAGCAGTCGGAACCCCGGTCGCCCTGAGGCTCCCCCTGCTGGTCTGAGAGCCATCCTAGCCGCTGTCTGCTGACTCCACAC EMBV3_43670 GCACACATGGTGTTCAAATTTGAACCTTTCTCATGGATTTTATGGTGTGGGCCAATATGG Gene GeneID:281193|GJA1:NM_174068:2_cdna Constitutive 1 NULL GeneID:281193 9 GENE GJA1 MGC128721 gap junction protein, alpha 1, 43kDa EMBV3_22970 CCAGAGCACAATCGGCCTGGAGCCATAAAGCCGAAGAAACCTCCGCCTCCCAGGGACAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40151 TGATCAAATGTCCCCGTCGGAACCAGCCCGTTATCGTGTTAAACCATCCTGACGTTGACT Gene GeneID:539006|ZNF518B:XM_002688457:1_cdna Constitutive 0 NULL GeneID:539006 6 GENE ZNF518B NULL zinc finger protein 518B EMBV3_27325 AAACGTTCCTGGCCTCCCTGCACATGGAGGACTTCACCTCCCTCCTGCGGCAGGAGAAGA Gene GeneID:531104|USH1G:XM_002696186:184_cdna Constitutive 0 NULL GeneID:531104 19 GENE USH1G NULL Usher syndrome 1G (autosomal recessive) EMBV3_39768 ACCTGGAACATCAACCACGCCCGGCTGATGGAATTTGGTCTCGCGCGGTTCAAAAGCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19785 ATGTCCTGTCAGCAGAGCCAACAGCAATGCCAGCCCCCTCCCAAGTGCCCCACCCTGAAA Gene GeneID:100295232|LOC100295232:XM_002686030:204_cdna Constitutive 0 NULL GeneID:100295232 3 GENE LOC100295232 NULL hypothetical protein LOC100295232 EMBV3_10414 TCTTCTAAGAGGGAAGGAACCATAAGGGCACCCCATCCAGGTAGAATTGCATTCGGTCCA Gene GeneID:514399|NDRG3:NM_001101996:1054_cdna Constitutive 1 NULL GeneID:514399 13 GENE NDRG3 MGC165984 NDRG family member 3 EMBV3_19900 TAACCCCGATTTGGAGAAACGGCGCATCCACTACTGCGATTACCCAGGCTGCACAAAAGT Gene GeneID:535702|KLF5:NM_001083727:2_cdna UTR3_Alt 2 NULL GeneID:535702 12 GENE KLF5 MGC139218 Kruppel-like factor 5 (intestinal) EMBV3_39233 AGAAGGAGCGGATTTCCAAAGCCTTTGCAGCCCAGTTTGAAGGATCTGAGAAGAGCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23709 ATGAGTGTTCCAGCGAAACTTTACAGAGACAGGTGGTGTGCCAGAGTTGGCTAATGGGTC Gene GeneID:528309|STK33:NM_001075908:149_cdna Constitutive 0 NULL GeneID:528309 15 GENE STK33 MGC139553 serine/threonine kinase 33 EMBV3_00595 ATCCAGTACGTAAAAGTGCCGCTGGCGGATGCTCCCAACTCGCGCCTCTATGACTTTTTT Gene GeneID:538872|LOC538872:NM_001078017:26_cdna Constitutive 0 NULL GeneID:538872 X GENE LOC538872 NULL similar to Dual specificity protein phosphatase 18 (Low molecular weight dual specificity phosphatase 20) EMBV3_34535 GCCTGCCCGCCGCCATGGCCCTGCTCCGAGCTGGAAGACACTCTGTGGACAGGATTAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09311 GGTTACCAAAGGGTGACGGGGAGGAAGGATAAATTAGGAGTTTGGGATGAGCATACACAC Gene BVT0102_043115 + 0 NULL GK000013.2:20143928-20248977 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044689 TCONS_00044690 1 XLOC_026254 NonCoding TCONS_00044690 XLOC_026254 NonCoding NonCoding - 13:20245738-20248619 - TSS32802 2765 2 TCONS_00044690_4 76 0.104159132007233 2 0.040625 0.00214541428040742 0.000598084430351031 0.00155642047122206 0.00127428664813385 0.00149454051041877 0.000693597559880246 0.00120667700283919 0.00141517080651617 0.00273914373025481 0.000122478814465354 2.06197532588336e-07 9.95440701310046e-05 0.000164445255776973 0.00176336376832955 0.000129538824949764 0.00215174190744799 0.00193941005695077 0.00108313979325386 0.00115860119109906 0.00297019156607131 0.00102215941714216 0.00107351103357675 0.000314265800984064 0.00166670324140304 0.000979257829870395 0.0016078328523262 0.00109364458394599 1.25854927150371e-06 0.000103584427293318 0.000246423953782617 XR_227471.1 LOC101904840 PREDICTED: Bos taurus uncharacterized LOC101904840 (LOC101904840), 0.0 1460 100.00 0.292224231464738 0 noncoding 0 0 1 1 -0.302068272357716 0.442101142272609 0.0207973977228063 0.718278849195462 TAGGCCACCGGCTCCGTCGCAACCCCGGCGGCGCCTCCTTCCTTTGCAGCCGAGGGAGAGAGGGAGGATTTTGCCGGGTCCTGCTCACCTTAATATCCTTCTCGGCCTGCCTTAGGCGCTGCTTCTCCAAAGCCCCTTGTGTGTCCGGCCGGCCGGCTTTGAACCCTGGAAGCCCTGCCTCCCAGGAGCCGGCTCAGACAGACGGGGACACTTAGTCACTCACCTTGTTAAGGTTTCGTGGGGCCAAAAACGTTTCCCTCTGGAAGGGAAGTAGCTAAAGCCGATATTTTTCTGGTGGGAGGATTTGCTTACGTCTTTGAGAGAGGGGAAGACTTAAGGAGGAGACGGGTGCCAGGAAAGATGAAGAAAGTTGTAGAGGAGAAACTGTAGGTGGACATGGGGGCTGGAGAAGAGACAGCTAAAAGAAGCATGGCTGGGCACATTTTGATAAGAGGATCGCAACCGCTGCCGGCCGGCATCATACTGAAACCCGGTTACTCAGAATGGGCTGCTGGCAGGCTGCCATACTGTTAGCCGAAAATGCGCATTGCCACGTGGTGAGCTGCAGCACCCTGTTGGGAACAGAACTCGAATGATGAGATTTGTGAAACTGAGAAGCAGTGTTTGATTTGGGGAAGATTAGAAGCTGTGATGCTCATTTGACCGCCAGTCTTGAGGAAGAAAAAAAGACAACCCATCTATGGAAATGTTGCCCATTGCTCGCCAGCAAAATTAAATCTTTGGTTAGGTAATCTCTGGAAACCTCTAAAGAAACAAGAATGATTTTTCCTACTTAATGGATGAGCAAATTTAAGAGACTAAATGATGTTTCCTTATTTGGGGAATCTAAAAAAGGATACAGATGAACTTATTTACAAAACAGAAATAGTCTCACAGACATAGGAAAACAATCCCATGGTTACCAAAGGGTGACGGGGAGGAAGGATAAATTAGGAGTTTGGGATGAGCATACACACACTACTCTATATAAAACACAAATAACAAGGACCTACTGTAGAGCCCAGGGAACTATACTCAGTAACTTGTAATATAACCTATAATGGAAAAGAATCTGAAATATATTCTTTTTCAGATTCTTTTCCATATATATTTTTTACAGTTTCTTTTTGGTGATATATATAACAAACTTTTCTGTACACCGGACACTAACATAACATTGTAAATCAACTATACTTAAATTTTTAAAAATTAATGTATCTATGTTAACAACCCAATGGTGCAGCTGCCAGCAGACCTCAACATTCTTGAATTTAAAGGTACTATTTATACCTTTGTTGAAAACGGATCAAAATCTATGTCTGGTCTCAACATGGATTACCATTCTGAAGTGTAGTTTATCCATGTTTGATTTGTACTACATTCCCCAGAACTTTCTTCCTTGTGTGATTTGCTACAAGAACATTATAAGATTCACATTTGCACAACATTAAACTAAATTAGGCCAAAGGCAGTGTAATAATCACCTTTTTAATCTGAGTCTCAAACACTGTTCCAGGTCACACAATAGGGGCTCAGCTAATACTGGATAAAAGAATAAATGGGTCCTTTTGCTCCCCTGGGACATCTGACTACACTAAAGTGTGAGTAGCAATTTATGTGCAGAAGTTATGAGCTTTGAGGAAATGAGAAATTAAAGAAACATAATCTCTAAGAAAAGCAGTGATTGGTCAGGAGTATGGCTGCATTCGTAATTTCAGATAAATATTCATCAAAGGACAGTTAACTATAAAATTTATGAGCGTTCCAAAGGTTGATCAGTTTTACCATGCTAAACAGAGTATCCTAGTAAGTAGGAATAGTGTAAGTCACATTGCTAAACCATGTCATGATACAACATCTATTAGTATCTTGAATTTAAGACAAATCGTATTTTACCTACACTCTTTCCCGGTTATTATAAATTGCCTTATGCCATCTCACAAGTCATTTTTATCAAATAATTAAAAGTTGACCTTTCCTTTAGTTTTGGCATCTTACTACTACATGCTCTACAAAATATGTCTTTATTCACTACTGTTTTCCAAAAGTAAGTTTTCAAAATTGCTCACCAGCAAAGACTTTACTGTTCATTTCAATCACTGTTTAACCCCCATTTCTATTAATGATTAAAGGACAGGCTTACATAAATGAAAGGAATCACTAATATTTAGTCAAGTACAAAAGAGGCTAAAGGCCTCTCTAGAAACCTGATTATCTTTTTCAGACAATGGGATCAGCATTGATTACTGACCTTTAGATCTAGTAGGCTGTATTTAATCACGTGATTATGGAATACAGGACTGGGAGTGAGTCAGTGTTGCCTCAGGAGTGGATTGCTGTCTTTCTCTTGTAATTTGAACACTTGGGGGATGCAATCTGTCAAAGGTTACCCTGTCCAGGAAGCTACAAATCATCCCATGATAACTTAAAGCCTTTTCAGTCTTTTGAGAGTGGAAGTACCTCTATAAAAATGTAACATTTTACAGGCAAATATGTTAGTACACATTCATTTACAAATGATTTTCCAACTGCAGTAATCAAACTTGGGCAAGACTCCATGGAGGTAGAGCAAAGGGTGAATGCCTGCATAGTGAGGAGTATGGACCCCAGAACAAAAATGTTTTGGTCTTGACCACTGGCTGGCACATTCTGGCTTAACCCAGACCAGATCAACTTTAAATAAGCTGGGTGACTTTGTGTCCCAGCATGTTCAAGTTACCCCCAATGTGTCTGTTACCCAAGCATAATTATTAATAGCACCCCTT TCONS_00042182 r 5' 606 TCONS_00042182 r 5' 103 EMBV3_09466 ATCATAATTTCTATACATATCTGTAAAAAACGTATTTTCTGTTAATTATTATTATTATTT Gene GeneID:786496|ZNF318:XM_002697298:133_cdna Constitutive 2 NULL GeneID:786496 23 GENE ZNF318 NULL zinc finger protein 318 EMBV3_08622 TCCCTGGGTTTGTCACCTCTTCCTTTTACCCTTGGGGCATCTCTAGACCAACCACCTTGC Gene BVV0102_250178 + 0 NULL GK000015.2:29102605-29193490 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41892 AAAGATAGCCGGTTGCCAGGAGCCAAAGGCAAAAAGGAAGCGGACCCCAGAGGGCCAGAA Gene GeneID:512925|RRP1:NM_001075589:39_cdna Constitutive 0 NULL GeneID:512925 1 GENE RRP1 D21S2056E ribosomal RNA processing 1 homolog (S. cerevisiae) EMBV3_37829 TACAGCAAGAAGCACTTTCGGATCTTCAGATTTTTGTATTTTTTGATCTGACTGTAGATG Variant GeneID:518897|CHEK2:NM_001034531:59_cdna 657^804 2 EMBV3_14613 GeneID:518897 17 GENE CHEK2 NULL CHK2 checkpoint homolog (S. pombe) EMBV3_09620 TATTCAACTCTGCTCCACCATCCTCAATGTGACCTTCCCCCCTGAAGTCATCGGACCACT Gene GeneID:532890|SLC10A1:NM_001046339:151_cdna UTR3_Alt 2 NULL GeneID:532890 10 GENE SLC10A1 MGC128766 solute carrier family 10 (sodium/bile acid cotransporter family), member 1 EMBV3_02680 AGATTCTTATCCACCGTGCCACCAGGAAGTCTTTGTCCCCACTTTCACACAAGCCCACGA Gene BVV0102_143602 - 0 NULL GK000007.2:4140375-4207259 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24234 AGTGCAAGGCTAAAGTAGACCCAGCTCTTGGTGGTGGCTGCAGACTGTGTGGCTCTGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11442 TGATCTACTAGGGAGTAAAACAAGATCTCAAGACAAAACAAGCCCAGGCGGGAACCGGAG Gene BVT0101_062196 + 1 EMBV3_37086 GK000028.2:7466320-7879942 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14261 GGACTCTTGAGCGAAGTCCTCTTGTGGCCTGAGAAGGTCAAATCCAGCTAGTGGGTCATT Gene GeneID:532883|LOC532883:XM_002691377:252_cdna Constitutive 0 NULL GeneID:532883 11 GENE LOC532883 NULL hypothetical LOC532883 EMBV3_42905 CTTTGGACGTGATCCAGCTGATGGAAGAATGAGGCTTTCTCGTAAAGTGCTCCAGTCTCC Gene GeneID:508877|PNPT1:XM_002691331:489_cdna Constitutive 0 NULL GeneID:508877 11 GENE PNPT1 NULL polyribonucleotide nucleotidyltransferase 1 EMBV3_37540 ATGGTTCTAAGCAAAGAAGTGTAAAATCTCGTGAAGTCTCCCTCCCATGTCCGCCCCACG Gene GeneID:512107|C13H20ORF12:NM_001076838:34_cdna Constitutive 0 NULL GeneID:512107 13 GENE C13H20ORF12 MGC139377 chromosome 20 open reading frame 12 ortholog EMBV3_36550 CTACCTGGAGTACTCCCTTCTTGCAGAGTTTGTGGTTTGGAGTAATATTCATCCGGCATG Variant GeneID:540462|AKTIP:XM_002694780:583_cdna 626^690 1 EMBV3_02547 GeneID:540462 18 GENE AKTIP FTS MGC133931 AKT interacting protein EMBV3_02350 CTCTTTCTCTGCAGCATCTTTACTCCACTACTTATTCATGCTCTCTCCCAAGCGCAGGTG Gene GeneID:505555|G7C:NM_001075206:66_cdna Constitutive 0 NULL GeneID:505555 23 GENE G7C C6ORF27 NG37 protein EMBV3_30661 CAGAAGACCCTGCTCTTACTCTGCATCTCACGTCGGTTCTGTTGTTTCAATTCTCAACCC Gene GeneID:515894|LOC515894:NM_001080276:5_cdna Constitutive 0 NULL GeneID:515894 9 GENE LOC515894 MGC142305 hypothetical protein LOC515894 EMBV3_29451 CCATGCTGCACATACAGTCCTTCCTGCCATGGCTGCTTCTACTGACGATGCCCATCTGCA Gene GeneID:505670|TMEM89:NM_001111068:85_cdna Constitutive 0 NULL GeneID:505670 22 GENE TMEM89 MGC159432 transmembrane protein 89 EMBV3_04381 TGCAGTGAACTCATCAGCTCCATCTTTGACTTCTCCCGCTCCCTGAGTGCCTTGCGCTTT Gene GeneID:527470|RORC:NM_001083451:115_cdna Constitutive 1 NULL GeneID:527470 3 GENE RORC NULL RAR-related orphan receptor C EMBV3_38666 TCTCGATATTGGTCAGCCCAATTTGGTGATGTACAACATGGCTTAGTGAAATTATATGCA Variant GeneID:280934|SULT1E1:NM_177488:5_cdna 108^342 2 EMBV3_41874 GeneID:280934 6 GENE SULT1E1 STE sulfotransferase family 1E, estrogen-preferring, member 1 EMBV3_41245 GAACTCCTCTCACCCTTACGAGATAGACAGGGACAAGCCTTTATAGACAGAGGGTTTCGG Gene GeneID:531068|OLFML1:NM_001035385:5_cdna Constitutive 0 NULL GeneID:531068 15 GENE OLFML1 MGC133781 olfactomedin-like 1 EMBV3_19177 TCAGCACCCCAACAGTTCTGAGTCCGGCTGTGATGACACAAAGAGACCCATCGTTCAGAA Gene GeneID:537483|ADAMTSL3:XM_002696621:161_cdna Constitutive 0 NULL GeneID:537483 21 GENE ADAMTSL3 NULL ADAMTS-like 3 EMBV3_22497 TTGTTCCAGATCGTCAGCTTCCTGCCGGCTGGGGTGATGTTGGTGGTGGGCAGCCGGTCC Variant GeneID:522802|ACCSL:XM_002693559:222_cdna 559^610 2 EMBV3_00467 GeneID:522802 15 GENE ACCSL NULL 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like EMBV3_34371 GGCTTATCTAAACCCTGCTACTTTCTGTCTCTGGTCTCTGAACTTCCTCCAGAGTAGTCA Gene BVV0102_303867 + 0 NULL GK000014.2:28171282-28367255 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051592 1 XLOC_031237 NonCoding TCONS_00051592 XLOC_031237 NonCoding NonCoding - 14:28318640-28319063 - TSS38446 423 1 TCONS_00051592_1 42 0.583924349881797 1 0 8.01445143854625e-05 0.00106898183720691 6.56312441392351e-05 7.8526284172214e-05 0 0 0.000151651708196093 0 3.73055792978674e-05 0 0 0 0 0 0 0 0 0 2.89849030849293e-11 9.75215731138239e-05 0 0 0 0 0 0 0 0 0 0 XM_005225438.1 PDE6C PREDICTED: Bos taurus phosphodiesterase 6C, cGMP-specific, cone, alpha prime (PDE6C), transcript variant X1, mRNA. 1e-27 127 77.38 0.385342789598109 0 noncoding 0 0 0 0 -0.332583981752376 0.0753572944793672 -0.0597955008877708 0.240861007570649 GGTGGGAAGAGTGGGAGAGTCCTGGGCTGTGAGCACAGGGAGGGGCTTATCTAAACCCTGCTACTTTCTGTCTCTGGTCTCTGAACTTCCTCCAGAGTAGTCATCTGATCAAATGCCATTGGTCTAGGGCCATCTCTACGCCTGGCATTCTATGATTAAAACCTGGCTGCTGGACACTTCCCTGATGGTCCAGTGGTTAAGAATCCGCCTTGCAATGCAGGGGACAGGGGTTCGATCCCTGGTCAGGGAACTAAGATGCCACAAGCCTCCGAGGGACTAAATGCTCCCTGTAACTGCTGAGTCCATGTGCTCTAGAGCCTGAACCACAACTAGAGAATCCATGTGCCACAATGAAGATCCTGCCTGATGCAAGGGAGAGTGAGCCCATGGACCACAACCAAGACTCAATGCAACCAAATAAAT TCONS_00051582 TCONS_00051583 TCONS_00051584 TCONS_00051585 TCONS_00051586 TCONS_00051587 TCONS_00051589 s 3' 146382 TCONS_00051582 TCONS_00051583 TCONS_00051584 TCONS_00051585 TCONS_00051586 TCONS_00051587 TCONS_00051589 s 3' 146382 EMBV3_38955 GTGGAGGAATCAGAGCCTGTATCTGTCCATTACCAAAAATGTGATTGACATTTAAGGATG Gene GeneID:404101|BMPR1A:NM_001076800:11_cdna UTR3_Alt 2 NULL GeneID:404101 28 GENE BMPR1A BMPR-IA bone morphogenetic protein receptor, type IA EMBV3_14898 TAAACAGGATGTGCTATGTGGCTTCCTCCTCTGTGTCAACATCTCTGGAGCTCCTCGGCT Gene GeneID:522375|ADAM11:XM_002696078:21_cdna Constitutive 0 NULL GeneID:522375 19 GENE ADAM11 NULL ADAM metallopeptidase domain 11 EMBV3_34808 CACTTCATCTTTGGAGACACCAGGAAGCTCATCACAGAAGATCTGGTGCAGGAAGAGTAC Gene GeneID:100337143|LOC100337143:XM_002700255:2_cdna Constitutive 0 NULL GeneID:100337143 X GENE LOC100337143 NULL melanoma antigen family B, 4-like EMBV3_34368 ACATCAGCGTGAAGACGCAGAAGGAGACAGAGCACCTGTTCATCCAAACCTTCTGGCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04988 GCTACTGCGAGAAGGTGTTCGCACTGGCTGAGTACCGAACCAAACACGAGGTGTGGCACA Gene GeneID:613607|ZBTB4:XM_002695788:306_cdna UTR3_Alt 2 NULL GeneID:613607 19 GENE ZBTB4 NULL zinc finger and BTB domain containing 4 EMBV3_29074 GCCATTAAGGCAGTGAAGCAAAAGGCTCCAAAGGTCTAAGGAAAACAGTGTGCCGGGAAC Gene GeneID:507240|PRPF38A:NM_001075307:28_cdna UTR3_Alt 2 NULL GeneID:507240 3 GENE PRPF38A MGC140421 PRP38 pre-mRNA processing factor 38 (yeast) domain containing A EMBV3_03062 CACACAAAGGGCTGCGAAGATCACAAAGCATGAAATCTGTGAAAACCGTGAAAGGCCGAA Gene GeneID:512704|REEP3:NM_001101961:13_cdna UTR3_Alt 2 NULL GeneID:512704 28 GENE REEP3 MGC165949 receptor accessory protein 3 EMBV3_05207 CTTCTAAACGCTCCCTGCCCCTTTTAACCACTTAACCACCTTGCAAGATCTCATCCCAGT Gene BVV0102_055442 + 0 NULL GK000018.2:36500065-36510904 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086138 TCONS_00086137 1 XLOC_052053 NonCoding TCONS_00086137 XLOC_052053 NonCoding NonCoding LOC100847995 18:36508351-36510849 = TSS64153 528 1 TCONS_00086137_1 103 3 0.789747697236684 0.000728462246199037 3.64401877143082e-05 0.000820900458852081 0.000116226866425618 0 0 0.000105123244424127 0.000152192028071201 0.00162328857997211 0.000169664928257402 6.88172513003564e-05 0.000329189071966384 0 2.54429060818815e-198 0.000385874243265046 0.000537665055057366 0.0101593616662477 8.72608789570401e-60 0.00123648512031647 0.00549252337893601 0.00388053292528028 7.0271540307948e-05 7.73805415630572e-05 0.000595332340556789 0.00256551483225914 0.00216812669490968 0.00113450161425485 6.3263381698282e-07 0.000871692583604182 1.13868333039971e-05 XR_228475.1 LOC100847995 PREDICTED: Bos taurus uncharacterized LOC100847995 (LOC100847995), 0.0 737 100.00 0.770833333333333 0 noncoding 0 0 0 0 -0.743165096306738 0.0451940635452427 -0.163024368248437 0.219272317990491 ATGAGGCCACGCCCACCTTCCGGAGGAGTTGCCCGCAGTCCAGTGGGTTACAGCGGCAGGTCTCGTGGTTTGGGCTCTGTCTCACTTTCTCCCTCGTACGCCTCCGATCTCCCCACCCCCAGCTCCTCTACCGTGCAACTCGCCAGAGCTGCCTGGGCACGGAGAGTAAAATCAGCTTCGAGAGGCACTTCGCAAGCCTGCAAGACCCAGTTGCAGATTGGCCAAACTCACCCAGAGTCTCCCAAGGACGCCCCGCACATTCCTGCTGGAGACCATCCTTCTAAACGCTCCCTGCCCCTTTTAACCACTTAACCACCTTGCAAGATCTCATCCCAGTTTTCTCATCTTCCCAATTTGTTGGGATTCTTTTTCCTTTGAACAACTTTATTCTATGCCTTGCTTGTTTGTCCAAGTAGGTTACAGAATACAGGAGGGCAGGAACCACCCATCGACTTCCTTTTGTTCCCCACTCTTCCAAAAATACCACCTTGCAGAGAAGGAACTCATTAAACACGTGATTGACTGAAA EMBV3_33812 TGGAGACTGAGGGGAAGACTCAGGCCTTCTGTATTTATTTTGGCTGCGCTGGTCCTCACT Gene GeneID:788627|LOC788627:XM_002693836:128_cdna Constitutive 0 NULL GeneID:788627 15 GENE LOC788627 NULL similar to olfactory receptor 1427 EMBV3_01165 TCGGAAGCAGGAAGCGGAGTGGAAAGAAAAAGCAAGCAGGCCAAAGATGTCTCCCGCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07041 CACCACCAGCACTGGCTGCTACTGAGAAAGGCACAGTGGACTCGTGTGTCATAACTTTAA Gene GeneID:539651|SETD6:NM_001098102:381_cdna Constitutive 1 NULL GeneID:539651 18 GENE SETD6 MGC152257 SET domain containing 6 EMBV3_11146 ACCATCATCTACCAGTACTTTGAGATCTTCGTGAAGGAGCAGAGCGAGGTCGGCAGCATG Gene GeneID:505064|SEC61A1:NM_001040504:11_cdna Constitutive 0 NULL GeneID:505064 22 GENE SEC61A1 NULL Sec61 alpha 1 subunit (S. cerevisiae) EMBV3_15867 TCAAATGCATTTTAACAAGCCTGCTTTTGTACTGTCCTTCATGATTACTGTTGACATCAT Gene BVT0102_034771 + 0 NULL GK000030.2:66723493-66893611 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244659 1 XLOC_150515 Coding TCONS_00244659 XLOC_150515 Coding Coding - X:66754009-66801535 - TSS183828 2995 2 TCONS_00244659_3 143 0.906844741235392 3 0.937043661230931 0.00091031289362346 0.00128893663228003 0.00106599381087946 0.000471135051966021 0.000583509607966506 0.000190712904365126 0.00035600341873465 0.000358061725405365 0.000639985005263006 1.82803893894927e-32 1.27389307354843e-07 0 3.95532868906065e-06 4.05429005347106e-05 3.28873458737205e-05 0 0 0 0.000496352617181188 0.000686370797998725 0.000105899593522813 4.24746267719256e-07 1.53156159158687e-06 1.86584793339209e-06 0.000760016566715856 0.000522006655796834 0.000467775612417889 3.20707044662422e-06 0 1.67285359060891e-07 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 0.0 735 94.86 0.15559265442404 TCONS_00244659_3 sp|Q10126|YSM6_CAEEL YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6; 6e-06 45.1 28.87 0.909090909090909 0 noncoding 0 0 0 0 0.3823026286181 0.288117490411009 NA NA GCATGCCTGTTCAGTTGTGTCTGACTCTTTGCAGACCCATGGACCATAGCCCATCAGGCTCTCGGGTCTGTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTTCCCACCCAGAGACTGAACCAGCGTCTCTTGCATTGGCAGGCGGATTCTTTACCACTGGGCCACCTGGGAAGCCCCCACCAACTAAGATGGGCGTGATCCAATTGATTGAAGGCCTGAGGAGAACAAAAAGATGGAGGCAGGGGACATTTGCTTTCTCTGAGCTGAGACGTTCGTTTCCTCCTGGCCTACTAGATCAGCACTCCTGGTTCTTGGGCTTTTGGACCCAGATTGTGAAATCAGTGCCCCAATTCTCAGGGCTACGGATTCCGACTTAACTATGCCACCAATCTTCCTGATTTTTCCAGCTTGCAAGACGGCAGACCAGGGAACTTCTCAGTATTCATAACTACAGCAGCATGGACATATCTCAGCCTATGATAGGTTAACTGACCATATAAGCATAGGCTTGGGATTCCCTGGTGACTCAAACAGTAAAGAATCTGCCTGCAATGTGGAAGACCTGGGTTCAGTCTCTGGTTTGAGAAGATCCCCTGAAGGAGGGCATGGCAGCCCACTTCAGTATTCTTGCCTGGAGAATCCCTATGAACAGAGGAGTCTGGCAGGCTATAGTCCATGGGGTGGCAAAGAGTCAGACATGACTGAGTGGCTAAGCACAAGCAGAAGCTAATTACTGAGTTCTTTACTCTGTTCCATTGATCAGTGTTTCTATTTTTGTATCAGTAACAAAGGTCAGTCTAGTCAAGGCTATGGTTTTTCCAATGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGCCTGCAAGAAGATACAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGAGGCAAGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGGCATGAGTCTCAGTGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCGATTCATGGAGTCGCAAAGAGTTGGACACAACTGAGTGACTGAACTGAACTGAACTGAACATATAATTAGCTCAGTTGGGAAAGAATCTGCCTGCAGTGCAGGAGACCTGGATTCGATCCCTGGGTTGGGAGGATCCCTGGAGAAGGAAATGGCGACCCACTCCAGTATCCTTGCCTGGAAAATCTCATGGACAGAGGAGCCTGGTGGGCTGCAGTTCCTGGGGTCGCAAAGAGTTGGGCATGACTGAGTGACTAACATATTATTTGAATTACTGTAGCTTTGTAGTGTAGTCTGAAAACAGTGTGCATGATACCTCTATCTCTGTTCTTTTTCAGTGTTGTTTTGGCTCTTTGGGGTCTTCTGTGTTTCCATACAAATTTTAAAACTATTGGTTCTAGTTCTATGAAAAATGCCACAAGTATTTTGATAAAGATTGCACCAAATCTACAGATAACCTTGGGTAGTATGATCATATTAACAATATTAATTCTTCTAATCCATAAACATGGTATATCTTTTTATCTATTTGCATCATGTTCAATTTCTTTCATCATGTCTTATAGTTTTCCAAGTATAGTTTTTTTTTTTTTTTTTTTTTTTACCTCCTTAGGCAGATTTATTCCTAGGTATTTTATTATTTTGGTTTCAATGATAAATGGGGTCTTTCCTTAATTTGTCTTTTAGTTCATTGTTAGTGTATAGACATGCAACAGATTACTGCATATTAATTTTATATCCTGCAACTTTATCAAAGTAGTTTTTGGGTAGTGTCTTTAGAATTTTCTATGAATATATAGTATCATTAGTATACTATATATAGTATAATATATAGTATTATTTCATTGGTACACAGTGAGAGTTTTAGCTATTCCTTCCCAATTTGGGTTGCTTTTATTTCTTTTCCTGTCCAAATGCTGTAACTAGGACTTACAATTCTATATTGAGTTAAAAGTGGTGAGAATGGGCATCCTTGTCTTATTCCTGGTCTTAGAAGAAATGCTTTCAACTTTTAACCATTGAGTACGATATTAATTGTGGATTTATCATGTATGATCTTTATTATAATATGTTGATATATGTTCCTTTTATACCCACCTTCTGGAGAGTTTTTGTTATAAATGGATGTTGAATTTTGTCAAAAGCTTTCTCTGCATCAGTTGAGATGGTCATATGGTTTTTATTCAATTTGTTAATGTAGTGTATCACATTTGTAGTTCTTTTTTATTCCTTCTTTTGTTTTCTTGTGATTCCATGACTATTTTTAGTGTTATGTTTGGATTCCTTTTTCTTTTGTGTTTGTATATCTATTATGTATTTTTGGTCTGTGGTTACCATGAGGTTTCTGTATAATAGTCTGTATATATACATTATTTTTTAAGTTGCTAATCACTTAATTTCAAATGCATTTTAACAAGCCTGCTTTTGTACTGTCCTTCATGATTACTGTTGACATCATATTTTATATATAATTGTGTATTTCTTAACAGCTTATTGTAGGTATAGATAATTTTACTACTTTGTCTTTTAAACTTCTTACTAGCTTTGTGCATGGAAAGTTTACTAATAACTTCACTGGTATATTTGCCTTTATTGAAGGGTTTTTTTCCTTTCATAATTTTCATGTTTCTAGTAGTGGCTTTTTCTTTTTCACTTAGAGAAGTAGCTTTAACATGTCTTGTAAAGCTGGTTTGTTGGTGTCAAAATCTTGGCTTTGTTTGTTTTATGCTCTCTGAAGCAAATCTGAATAAAAACCTTACCTTGTATAATA TCONS_00244657 s 3' 390413 TCONS_00244657 s 3' 390413 EMBV3_18091 AGATTGAATGAGCCAGGAGGCACTTCAGTTTTGAAAGTCACCTTCCTGTTGGACTTCCTG Gene GeneID:507084|THG1L:NM_001080233:2_cdna Constitutive 0 NULL GeneID:507084 7 GENE THG1L MGC152057 tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) EMBV3_18474 TGGGATTGCCACTGGGCTTCGTCGAGCCCTGTTTGAATTCTCGGGAAATACTCGTTTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07190 TAATGAAATATGTACAGGCCAGATAGGCATTTGGAAGCTTTAGGCTCTGTAAGCATTAAA Gene GeneID:613731|LOC613731:XM_002691864:173_cdna Constitutive 1 NULL GeneID:613731 12 GENE LOC613731 NULL similar to fibroblast growth factor 9 EMBV3_36879 TTCTGACCACGGAGCCGGTACTGGAGGGGACTCCGTATCTAGACAAGTTTGTGGTGAGCT Gene GeneID:538004|NAGS:XM_002696039:319_cdna UTR3_Alt 2 NULL GeneID:538004 19 GENE NAGS NULL N-acetylglutamate synthase EMBV3_15830 TTCCTACAAGCGGACGGGATTCTTTGGAAAAATCAGCTGAAAATGGCTCGTTTCACGATT Variant GeneID:515269|SPG7:NM_001102022:246_cdna 780^882 1 EMBV3_01424 GeneID:515269 18 GENE SPG7 MGC159511 spastic paraplegia 7 (pure and complicated autosomal recessive) EMBV3_28883 GCTCTCTCTCGTCACTGTGTTACACTTATGCATTGCCAAAGTTTTGTTAGTCTTGCATGC Gene GeneID:536619|PAIP2:NM_001034636:11_cdna Constitutive 1 NULL GeneID:536619 7 GENE PAIP2 MGC128370 poly(A) binding protein interacting protein 2 EMBV3_43785 CTCCGGAGTTCTACAAAAGCTGCCTTCTTGAAACGTTTTCCAGAGCTTCTTATTACCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22731 GGATAGCAATGGTCATTTCTTCACTTGATATGATGAGGTACTTTAGTGCTTTGTGCCTGC Gene GeneID:511291|CHPT1:NM_001075507:998_cdna Constitutive 0 NULL GeneID:511291 5 GENE CHPT1 MGC139226 choline phosphotransferase 1 EMBV3_09866 ACTTTAATGTTTTGATTTGTTTGGCCTCACCGGGCGTCTGGCACAGAAACCTCTGCTGAC Gene GeneID:100294820|LOC100294820:XM_002695969:303_cdna Constitutive 0 NULL GeneID:100294820 19 GENE LOC100294820 NULL hypothetical protein LOC100294820 EMBV3_07113 GAAATGGACTCCACATTTCACCTGCCTCTAACTCAGCCTCGATGACACCCTGATGGGAGG Gene GeneID:507966|CDC42EP2:NM_001075341:536_cdna Constitutive 0 NULL GeneID:507966 29 GENE CDC42EP2 MGC142772 CDC42 effector protein (Rho GTPase binding) 2 EMBV3_10210 CAGAGGCTCCGGGCCCTGCTTAATCCAGCAGAGAGTGATTACAGCAATTTTATCATGTGA Gene BVV0102_053728 + 0 NULL GK000013.2:54894623-54916960 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33907 TGGGGCTGCCTCTGGACAGCAGGTTTTCAAGGATAAAAAAGGCCCAAGTCTTGCCTCATT Gene GeneID:613506|PRSS8:NM_001076931:380_cdna Constitutive 0 NULL GeneID:613506 25 GENE PRSS8 MGC142619 protease, serine, 8 EMBV3_04007 AGTGATCTGGTGGGCAGCCACACCGCAGAGCCACTACCTGACCATCAACCAGCAATTGCT Gene GeneID:509897|MTHFSD:NM_001046042:174_cdna Constitutive 0 NULL GeneID:509897 18 GENE MTHFSD MGC137477 methenyltetrahydrofolate synthetase domain containing EMBV3_28944 GAATGGAACTCAAGGGTGGTATCTACGTGTCATTCTTTGGTGGTTGGGCTTGTTGGCTTG Gene GeneID:614522|LOC614522:XM_002686224:219_cdna Constitutive 0 NULL GeneID:614522 3 GENE LOC614522 NULL similar to transmembrane protein 56 EMBV3_42065 AGGAACTAGCCACTTCATCGCCACTTCATCTGGGCCTTCTAGACTTTTGACTTTGCCAGC Gene GeneID:317708|HTR4:NM_001040485:28_cdna Constitutive 0 NULL GeneID:317708 7 GENE HTR4 NULL 5-hydroxytryptamine (serotonin) receptor 4 EMBV3_33316 CTGTCCTGCTGCCTAGGGGCCATAAACGAAACACACTGCTTTATACTTTAGAAGGTGGTG Gene BVT0102_060332 + 0 NULL GK000002.2:112773369-112793507 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106264 TCONS_00106266 TCONS_00106269 TCONS_00106259 TCONS_00106260 TCONS_00106261 TCONS_00106268 TCONS_00106265 TCONS_00106262 TCONS_00106267 TCONS_00106263 1 XLOC_062758 Coding TCONS_00106259 XLOC_062758 NonCoding Coding WDFY1 2:112784685-112795174 j TSS78245 9213 1 TCONS_00106259_16 139 0.216541843047867 3 0.121853546910755 1.97839630700301e-07 0.000170581868986066 3.42109678833609e-08 0.000686287576381975 3.59335836873165e-10 0.000265561489386522 0.000241725108016532 6.82222339511722e-16 1.27377562269896e-08 0.000336131092752277 1.85780049410009e-06 3.8513469042998e-25 3.26950987359744e-12 0.000239581988615929 2.62969829666681e-09 0.00302863637183868 1.64040182123932e-09 0.000545982794392786 0.001514215806719 2.17394971952619e-12 1.48999039146632e-13 0.00241832690050345 1.12500181839485e-06 4.20359109174388e-05 0.000362803656419801 1.3979254975751e-12 0.000975767594402167 1.01523628105171e-05 0.000100876898525315 0.000299642206333016 NM_001046542.2 WDFY1 Bos taurus WD repeat and FYVE domain containing 1 (WDFY1), mRNA. 2e-161 576 100.00 0.0345164441549984 NM_020830.3 WDFY1 Homo sapiens WD repeat and FYVE domain containing 1 (WDFY1), mRNA. 0.0 1721 71.56 0.376967328774558 0 noncoding AGTGGTCAGACCTCTGCTCTTACCACCGAGGGTGCAAGTGCAGTCCCTGGTTGAGTAACCAAGATCCCTGAGTCGGACATCTCTAGCAACCTTCCATGAAGGAAAACATAACATCTCCCACATGTCCATGGATGTTGCTAGGGGCCTGATGGTGACCTGCGGGACCGACCGCGTGGTGAAGATTTGGGACATGACGCCCGTGGTGGGCTGCAGTCTGGCAACCGGCTTCTCTCCACACTGATGCAGGGGCCAGCGGGGTCTGAGTCTTCACGGCGGCCACCTTCCCCTACACACAACGCTTCCCTCTAGCTCCACAGTCCCTTTCAGGTGGATGGACAGCCAGCCACTAAAATCAAATCAGCATTTTTATAAAGAACAAAACGTGAACGTGTGTTTTTGGGCATTTATGGAACTATCCGTGGGGACTGACATAGCGGGTCCCCAAGGAGTGGAGTTACTCCAGCGAGACGTCCCGCGAGCAGTGAGCTGATGTGTGCCGAGACAGTAATTTAGCACACGAGAGTTTCAGAAGAAAAACACTGAACGAAAGACTTAAAGCCTAGAAGTTTCTGCAAGCAATTCCAAGTGCAAACACACTCCCCTCCTCCCAGACTTGCTGGGCCCTCGGGGGTTCCCACGCATCTCTGTGGTCAGAGCAGGGGTCCAGGGAGGAGGACTTGCGTTCTCTCTTGGGGGGGTGCAGGGGTCTTAGAAACCCAGAGCCCCTCCTCGTCCACTGGCGTCTGTGAACATTCTCTGCCCCTAGTCACTGACAAACCTCTTGATGGTACCTGTCCTCTCCAGGTAGTGCCATGTCTGCACTTAGTGTGTGGTCCACTTCAGTTGTTTCTCATCCCAGCCAGCGTGCCGTGGGCGGATCCTTACTGTTGTCACCAAGTGAGCTGTACAGTGTCTATACTAACCAAGGGAGTCCATATCCTTCCCTGTCCCCCAGATGTGCTCTGAGGACAAGATGTCTCTATGGTGCTGTTAACATGGGACTCGCACAAGCCGCCTGACTTTTTCTCATTGCAATTAGGGATGACTAATGGAAAACCCAGCTACCAGCGTGACTGGGATGGGAAACGAGCAGTCTGCTCCGTGGAACAGCCCAGTCCTCCTGAAAGACACAGTCTATTTGCAGCCCAAGATGAGCCCCTGTAAATACCGTGACACTTCAGTAGACACCTCAGAAGAGAACTCCAAAGCTTTTTAAACTAGGTTGACTTTTAGTTAAAACTTATTTCGTAGAAGGAAATTGGTAACCCAGAGCAGTGACTATTAACAAGGTCCTGCACAGGTATTCCTAACTTGTAAGTTATTCCCAGAACAGTTAGCAAAATCTTTTGTTATCAAATGGCATTTTAATTTAAAAGGTTTTGGCCACTTAGTACTAGGATTGGGGAAGAGGTAGGAAATGGGGAGCCTGTCTTTTAATATTCAGATATTTATTTGTTTTTAACCGGCAGTACATGTGTCTTGTTACTTTAGGGCTATTTTAAGGATAGATTTTAAAATAGATAGCAGCAGTATTTTTGTTAGTCTTACTGATGGATATAGAAAAATACTACTGCATTGCTTTTAGGGGATCAAACCAAGACAGCATCATTCTGTGTGACATAACTAAGGGACTTGATAGTTTTAAATAACAGTTGTTAATGAAAGTGTGTTTTTAATAACAGTTTAAGACAGGCAATTAAACTAAGATGTCTTAATGGCCAGTGGCACAAATTAGGAAAGGAGGTCAGGTCATCATGTTCTAGAATGATCTGCAGTAGATGTCGACTTGCCTTTAGAAATAAGACTGAAGGGTTTTATTGCTCCTTGTAATTTTTGTGTTGTATCACCTGAAAAAGATGTTTTCTTTCAAAACTTGCCCTAGGCCCTTGGCAGAATGTGTGTTCTTGACATAATCCAGGAGAAAAATCAAGTGGTGGTAACTTGAACGGTAGTGTTGAATGTCAGCTTAATTTAGTTAATGGTTTGGCTCATACACACAAAGGTGCTGTGTTGGGGATTCTCTGAAGTCCTGAAAGGAAAAGAGAATATGAACTATTTCTTGCCATGCTGAAGAATGCTACACGATGGTTTTGCTTTCTTTCAGCCTCTGTAAAATGTGATTTTATGATGCTGTGGTAGACTGAGCAGTTTCGCAGCTGTCAAGGATATGCCATAGCTTTTTGACTTTTTTTTATTTTAAAAGATTCCTAATGAAAAACCTAATGTTTCACAGAGAGTGTAAGGCTGATACAGTGCCTCCTTAGGGGTTAAACTAACATAAGTCAAGAGGGAGAGGTCTGTGTCAGGAAGAATTGGAGCCAGGTATCTGGAAAAGGAAAGGAGAAAGTTTCAATATATTTTCTTTCCACCAGAGCTTACTACCATTTTTTGTTTTAAACACACATGTGGTAGGCTTGCCTTGTCTCTGTCACACACAAGGTAGTAAATGGGGTAATATTTTTTATAGAGGTGGGGAAAAATTTTAGTGATTGGGCACATATAGTTAGACTTCTGGTTATTGCCTTATTTTGACTGCGTTACTTTTAAACGGGTCACTGACAATATATAGTTCTTCAAATAATGGTTTACCAGTTTTTCCATTCCTGAATGCTCCTGCAGAGTCCCACTTGGGGATCACGAAGAACAGAATGTTAAGAGAAGATCTTTCTGTTTAGATCTAGTATGCGTGGGGTCGCAGAGTTGGCCACGACTTAGCGACTGAACAACAACAACAAAAGGTTCGTGATCAAGACCTTCCAGTTCTTCCTTCTAAACATGTTTTAAAATTGCTCTTTGCGATAGGAATATACTCTTGTAGCATTAGATGGAAGCAGACTCTTCATTACTTGTAAATCTCTGTTTACTGTGTCTTAGTTCTGTCCTGCTGCCTAGAGGCCATAAACGAAACACACTGCTTTATACTTTAGAAGGTGGTGTCACTTTGTTCTCCCCCTACAGCATTCAGTTTGGTAGTACGTACAGATTTAAACTGTTGAAACTGGCCTAAGTATGGAATAAAACCACAGTGGCTCAGATTCAAGGAGTTATTTTCTAAAAGCAGTTTTCATTAATTACTTCCTACTTCATTCCTGGATCTGGTATCTCTTAAAATGTAAGAAACCGGTTACTATTAATGATAAACCGTCTGCTCATTTTAAATGTGAAGTTTAACAAATAAGTAATACATGCTGTATTTGTGTGTCTATTGCTTAATTGTTAATTGTGAGCAGATTATTGAATGCCTACTCTATTTTCTGCAGTTTACTACACAATAACTCTTTGAGTAAGTTGATGTTTAATTGTGCAACAAATTTATATTAGAATACAATTTAAAGTGTTTTTCTCTCTAGACTTTTTTGACTAGGGAGGCAAAGGGCAATGTTGATTAGTACATTTTGTCTTGTACTACTAGCTACGTTTCTATAAGATAGGGTGCCCTGCGTGTCCCAGAGAGCTAGAAACCTTTGTTCTTTGCTCCTGTTTGTGGGTTCTGTTTTTGTGGGTTTTTTGAGAACATGCATACAATAAAATGTTCCTTGCTTGTTACCCGGTTGTTTAATTTAGCTTTTGTTCTGTTTGACCTGGACATAGTACAGCAGGAGTAACTACCATGAGTTTAGTGCTGCCTGTGTGCTGGGTGCCCTGCCGACCTCGTACTATTTAATCCTGGCAACACTTCTGCAAGGCACTGTTTTCTCCATTTTACAAATGAGAAAACGAAGTGAATCTTGTCTGTCTGTCTGACTCAAAAGCACGTGCCTTCTTTATATCGCGTGCCTTAATGTGCTAGCGTGTAATGAGGGTTTGGTATAAAGGAAGTAGGTATGATCTGTCTTGAAGTTTATGAGGCCCTGGAGTGAGATTGCTCAGGATACCCAGGCCCCCTGAGAGCACTGAGCCTCGTGGAGACAGCATGAGCTCTGCCCTGGGTCCCCTCACAAACAGCTCAGTTTTATGAAGAAACAGGATGATTCAGATCCAGGATAAGAGAGTCCTTGGCTTAACTGATGAGGGGTTGATTTAGAGATCAGAACAGCAGTTTATTGAGAGTTTTTTTTTTTTTTTTTTTTTAAGAACCAAAGCTTTATTTTCTCTCATCATCAGAATGTTTATTGGCAGTTCCCTGGTGGTCCAGTGGTTTGGAATCAGTGCTGTCCCTGTCAGGGGCCGTGGTTCCCTCCCTGGTTGGGGAGCTACGATCCCACAAAGTGTGCAGCGTGGCCAAAGAAAAAAATATAATAATATGTTTATTGCAATAAAAAAAAGGAAAATAAAAAGATAATACCACAAAAGTATTTAAAATGTTTATTTTTAAAAAGTCCTTTAGTGCATGCAACCATGCAGAGACACCACTGTTAAATTTATGCCATATATCTTCCCAGTATTTTTGCTTTTTTAATGCATATGTACATATAGGACACATACTTATAGACCTGTTGTTAATGGGTACCTACCTTCTTGCCACACCTGATGTAGTGTGGAGAGTTTGCCCCATGCCCAAAAGTTGTGCCCCCTATTAGCCTCATCAGCTGCTGTAGAGTCGAAGTGGATGCTGGCTCTGTGCCCATGCACTGGGACTGTCAGCCTCCTACTCTGTGAAGGTAGGTAAGCCCACGTGACTTGCTTCAGCCCATGACGTGCAGTCAGGAGAGTTTAATTGCAGGTAAGAGGCTTAACCACCAGTTTCTTTGGGATGCCAAGCCATCCCATGAAACCCAACGTGCTCTGGATCTACAGTGGGTGTTACTAAATCTTCTGTTGTTTTAGTCTGCTGAGATAAGGGTTTTCAGTTCAGTTGCTCAGTCGTGTCTGACTCTTTGTGGCCCCATGGACTGCAGCACACCAGGCTTCCCTGTGCATCACCAACTCCCAGAGCTTGCTCAAAGTCATGTCATCGAGTCAGTGATACCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTTCCACCTTCAGTCTTACCCAGTATCAGGGTCTTTCCCAATGAGTCAGTTCTTCCCATCAGGTGACCAAAGTATTGGGTTTTCAGCTTCAGTATCAGTCCTTCCAATGAACATTCAGGACTGATTGTCTTTAGAATTGACTGGTTTGATCTCCTTGAAGTCCAAGGAACTCTCAAGAGTCTTCTCCAACACCACAGATTTTTAGCTGCAGTATAATCTAGCCTGGACAACTGTATTCCATTATTCCATTATGTGACTAAACCATCCTTTATTTCACTGATCCCATTAATTGAAGTTAGGTTATACATTTTTAGAATATTTAAATTTTCAAATAAAACTAAACATTTAAAAATACTAAACTCAGCATGCTTGTATATTCATATTTGCACATTTTTCCAATTATTTTCTTAGGATGCATTCTTAGAAGTAGGAATTGCTAGGTCAAAGAATATCTGTTCTAAGTTTTTAACTCTTATTGCAAATATCCTCATACCATTGCCAATACTTGAATTGGTTCCTTTGCACAGGCAATAAACAGGCATAACTTAGTGTCCTAGTCTATGAAATTCCAGTTTATTAATGTTTGAGTTTCTGTGGGACAGTCTAGATAGAACCCCAGTCACCCCAGGAAGGCTGCTTAGTGGACAGGATGCAGAGGAAGAAAGTTTGGTGGATGACCTTGCTGCTGTCACGACGGCCTGATAGGCGTGTCTCCAAGGTCGCTGGAGGGTGAGCTGGTCTCTACTTGGAAAGTGGAAGCAAGACACAAGACGATGGAAAGTGGAAGCAAGACACAAGACGAGTTCTTGTGTCCTGCCTTCCCTTTTAGGTGTTACCTGGCTTCCTTGTGAAAACATTCTCAGGAGGAGAATGTAGGTACTTGAGATATGCTTCCTTTCCCAACCGCCAGTCTTTAGTCCCTAAGTTTCCTTGACAACAGTATAATTAGATCTCTTTCTATATCCTTTCACCACACATACAGACCATCCCTTAGAAGGCTTGTCCCATACTGATACATATGGTTTCCCATAAAAGTTGAGACCATGAGTCCTATCATTTGTAGCATAGAGATGGAGCCTGAGAGAAAGTTTACCAGGTCAAACCCAAGTGGAAGACTGAAGAGTCAAGCTGCGGTCCATCTGACCTCAAAACCCATGCTCCTCTTTCTAGTGCCCCATCTAGCTCTTTCTTTGAAAAAAACCTTTCTTTGAAGAACATTTAAATCCTGAACTTGACATTCTGAAGAATGACGAAGTAATAGAGGTTTATTTATACTGTTAACAAGGGTTGTGTGGCATGTTTCCCCACAGCCTAGTGTTTGAGATCGAGAGGGCCATTAGGACTCTATTTACCCCCCAGTCATGAATCAGCGGTGGCCCTAAAAAGTGGCTTCTTTGGTGACATAATGCCAAAATTTCTTACAAGCCAATCATTTCCCATATATTCTGAAGAACAGGGATCCTTAATCTATGCTTTATGATACTTAATGATTCTCTGTTATTTTTACATAATTTCACAGTGGTTAAATTCCTTCTAGAAAGTAAATTTTATTTTTATCTGAAATAGATTAATGCACAATAAAGAATGTAGGCATGCCCCCAAATCAAAAATTTGAAAGAACTTGGGAATCACTCTTCTAAAGTATGGCTGTTAAAGCGTATGACACTTGTAACAGATTTGTATTTAGATCTGCCCTCATAATGAGGATTATCATCTATTCCTGCAACATTTAAGAATGGCCAGTAGCCTGTAGACTCTAGAAACAATCAAACTCACCTAATGGAGTCTCATGTTACATTTACATGTTTCATGATTTTACTGTTTCAGAATTCAGAGTGTCATTCCCTTATTAAATATGATAATTCTTTTGACAATATAATGGTAACCAAGTATTTCCGTAGATGTTCCCAGTTAATGCAGTGATATTAAAACTTGCATGATTGCACAATTTGTTGAATTCAAGATAACTTAAGTCATAGAAAGGCAAATGATTTTCCAACACTTGCAGGTTTATTTAAACTCTTCTGTACCCACCACATACTTTAAATCATGACAGGAAAGTTGCCACGTGCATGGTGATGGCCTGCTAACATGTGCACTGGTTCCTGCCAGACAGCCTCTGGAAGGCAGGGACTAGCCTTTCTGTGTTGTCATTGCCCATCATACCCGAGTTTCTCCCCATCCGTTGAGAATGCCACATTAGGCTGAATGCGTTGGTTTTGTGTGCTCTTCCTTGAGCTGTTACCTAGAGTTGGAGGAACTAATTAGAGAGCAGCTTCTAAAATGAAGTAGAAATATCTGGTGGACTTAACCCAGTGTGGTGTCAAAAGGGAACTTCCCAGTTGGCTTAGTGGTACAGAATCCATCTGCCAATGCGGGACATGCAGGTTTGATCCCTGGGTCGGGAAGATCCCCAGGAGGAGGAAATGGAAACCCACTCCAGAGGAAAAAGCATATGGTCAAACAAATTTGTTTATTTCTGGATTTACTTGCATAAAAATAATTTTTTTCTCAAGTGACTTGGGACTTTATTTCTACATTATTAACGTACTTTCCTGTTGTTTGTATTTTATTGACATTGAATTGTCTTTTGCTGCAGGAGTCTATCAACTGTATCTATGTAATGAGTCCCACATTGCAAACATGTGTTGAAATAACAGACAAGCTTGCAGACCCAAGCCTCAGTACAAGTCTAGTGGCTCTGCCCTCAAAGTGCATCCTCCCAGTACGGCCACTTTTCACCGTCCAGCTCCTATTACCACAGTTCAGTTCCCTGTCATCTGGATTGTGCCAGTGGCCTCCTAACCTGTCCCCCAGCTCCTGCCCCTACCAGCCTTTTCTCAACATGCCTGTTAAAACACAACTCTGATCATGCCATTGTTGGACACAAAACCCTCAAAACTCCACCCCACCCACGGTAGACACCCTAGTTGTAAACAATCCAGTCATCACCTCCCTGACCTCTGCTCTCCTCGCTCACTCTGGTCTAGCCACGCAGCTGTTGTGTTCATCTCTCTAACTGCTATGGGACAGAGAATTTGTGCAAACAGCATAGACCTTGGTAGGCAATCAATAATGAATGATGTGGGACTTCCCTGGTGGTCCAGTGCTTACTTAAGACTCTGTGCTTCCACGTCAGGAAGCATGGGTTCCATCCCTGAGAACAAAGATTCATTGTGCAAGCCTTGTGCCACCACAGCCAAAAAAAATTTTTTAACTAGCAATACTTTAAAAAATAAATACATAATGTTACCTGTATGTGTACAGTTTGGATGCCGTGTGCGTAAATGACAAGGAACTTAGGTGAATTTTCTTAGGGAGTGAGTCGGTAGTGTGAAATTCCTGTTCCTCCACTGCCATCATTCCTGCCCACCCTGTCCTACCTTCCAAGCTACTCAAACAGTTTCCAGCGGCCAGAAGGAACAGTTAGAGAAAAGTGGGGAGATATTACAGGGGCTAAGTACACAGGGGACATGAGACACTTCTAAAACATCAAACACTAATTCCGGGTTTCTGATCATCATAAGACCTAATCAGATGTAACCAGTCTGCAGCTTCGTGCTTGAAGCGGTGTGTGATTTTAAAATACTTCTGCAAATGCTTAGACCTTCCTTCTGTTGAGTGGTGGGTCTTATGTACCTTCCCCTTGAATCTGGGCCAGCCTTAGTGATTCACCAATAGAATGTGGCAGGAGGGACTCTGCAATATCTGAGGCTAGATTAGAACATGCCCTGCTGCTTCCACCTGGTTCTCTGTGGGACACCAGGCACCTCAGACCAACAGGTGTCTGGTCAGCCGCCAAGCTTGAGCTCTCGCTGATGGCCAGCATTAACTGCCAGCTGAGTGCGTGTGCCTTCTTGGACGTCTAGCCCAGCTGAGCTTTCAGATGTCTGCAGATCAAGCTGCCAACTGCCATAGCAGGAGAGACACCCAGCTGAGGACTACCAAGATGAGCCCTTCCCGAATTCCAGATCCACAAACTGTCAACAAAATAAAGTACTTGTTTGAAGCTGCTAAGTTGTGGAGTGATTTGTTTTGTAGCAATAGAGTAACCTGAACAAGGAGCCATTAATTCCCCATCTGGGAACCAGAGGGCAGAGTGCTACCCCTCCCCTCCCCCTCCAACCTTAGCAAGAAAAGTGGACCCAAGTCACCGTAGTATTGTGAGCTGATTCAGAAACAATGAGTTTTTTTGCATGAGTATTCTACAGGCCTATAGTTAATGGGTCATGAGCCTTGTTATTTTTTTCTTCAGATTTCCTCCATTTTCCT EMBV3_02124 CCCAAGAATCAAAAACAAAACAACTTTGAACTCTCTCTTGAAAGAAACAGTGGGCTTCCA Gene GeneID:613844|METTL7A:NM_001035439:116_cdna Constitutive 2 NULL GeneID:613844 5 GENE METTL7A MGC128396 methyltransferase like 7A EMBV3_24765 TTCAGCTTTCATGGGCTCAAGGGTGGCAGGCATGGGGCAGAAACAACAGTAAGCGAGAAA Gene GeneID:613798|C4H7orf53:NM_001099718:78_cdna Constitutive 1 NULL GeneID:613798 4 GENE C4H7orf53 C7orf53 chromosome 7 open reading frame 53 ortholog EMBV3_40214 GACCTGGTGGAGAAAAAGGAGGGTCCAAAAGGGGAGAGAGAGCAGTCAAGCCAGTAATCT Gene BVV0102_363890 + 0 NULL GK000005.2:45834982-46144222 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048821 1 XLOC_028952 NonCoding TCONS_00048821 XLOC_028952 NonCoding NonCoding - 13:49228067-49229934 - TSS35997 1867 1 TCONS_00048821_2 146 0.999464381360471 1 0 8.50204444909393e-06 5.85306822705772e-05 2.38764504935811e-05 5.21882223850702e-05 9.64782059883322e-05 4.70552318997182e-06 4.12658271959067e-05 3.92220738412451e-05 5.44901498947918e-05 2.4952017605714e-05 1.37180263318202e-05 3.05048264191136e-05 3.2408378147502e-06 6.05580894893211e-05 1.55179461418686e-05 0.000297895656095542 0.00181579638093753 0.000125369232852882 1.15226505591118e-05 7.04942884268062e-06 5.42701916797122e-07 0.000243089112373025 0.000215523070769692 0.000143754492585687 5.56654035784574e-06 1.60053469663916e-05 3.21672853647556e-05 3.70012069824815e-05 0.000139691646697751 6.02392741611792e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 1e-130 471 97.15 0.149973219068024 NR_103734.1 LINC00342 Homo sapiens long intergenic non-protein coding RNA 342 (LINC00342), non-coding RNA. 1e-09 69.8 66.36 0.168719871451527 0 noncoding TAATTTATGCTTTTTGGTATTTGTTATCAATTTTGTACCTGTATTCTTTTTTTTTTTTATAATTTATATGACCTTGTTTGTTCTTGTTTGTTTGTTTTTTTTCTCTCTCTTTCTTTTTCTTCTTCTTCTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAACTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTATATTTTTATAATTTTTGCAACCTTGTTTGTTTTTGTTTGTTTGTTTTTTCTCTCTTTCTTTTCCTTCTTCTTTTCTTTAACATTGTATTTTTGAAATTCCAAATTCTACTCTAGATTTTAAATTTTTGTTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGAACCCAATCTTCAGTACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCACCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTAGATCTGTCTCCCTCCTTTTCATTCCCCCCATTTATCCTCCTGGCCACCTCTGCCACTTTCTTCCTTCTTCTCTTCTCTGTATAACTCTGTGAACAACTCTGAGCGGTCCAGTTGTGGAGTGCACATAAGGAAGAGATTACTGAATAGCCCACTCTCTCCTCTATTGATTCCACCTCATCTCATTCGGGTCACCTCTAACTCTCTCCTCACTCTTCTCTTCTCCATATAACGCTGTAAACCTCTCTGGGCAAAACAAGTTTCAGGGCAAGACATACCAAGCAAATTCTCCAGCAGCAAGGAACACAGCCCTGAGCTCCAAGATACAGGCAGCCCAAAGTCACCCCAAAACCATAGACATCCCATAACTCATTACTGGACATTTTATTGCACTCCAGAGAGAAGAAATACAGCTCCACTCACCAGAACACCGACACAAGCTTCCCTAACCAAGAAACCTTGACAAGCCACCTGTACAAACCCACACAGAACGAGGAAATGTCACAATAAATAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGTAATTTAAACAAGATGAAGAGACAGAGGAATACCCAGCAGATAAAGAAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCTTGGAGACAAAGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAGAGAGTCAATATAAAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGAAGAAGATAGGATTAGTGAATTAGAAGATAGAATGGTTGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAACACTACAACATTTGAATCATAGGGGTCCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAAATGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACGGGATAAACCCAAGGCAAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCT TCONS_00042891 . 5' 319681 TCONS_00042891 . 5' 319681 EMBV3_19839 CTGATGCTAAGAGCACTCCGACGGCGGAAGCTGAAGAAGCAGGCATTGGCGACACGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06830 CCTAGAGGCAAATGAAAATAAAGCCACTACACTCCAAATCCTGTGGGATTTAGCAAGACC Gene BVV0102_335118 + 0 NULL GK000030.2:100534529-100673199 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08567 CTTTGTTCAGTTCAACACATCAAAAATTGTATACCATTGAGGTAGATAATTTGGCAAGGG Gene BVV0102_060701 + 0 NULL GK000007.2:87040576-87179149 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43319 GCTCGTAGAGTTACTAGAGTCGACAGAAGCAATACGTGGCTTAACTGTTGGGATTGGGGG Gene GeneID:100336575|LOC100336575:XM_002692934:53_cdna Constitutive 0 NULL GeneID:100336575 15 GENE LOC100336575 NULL matrix metalloproteinase 8 preproprotein-like EMBV3_28651 ACCACCATTATTATTAGCTCATCTCTTAAGGAGTTGCATTTTTATTGATGGATGCTAGAG Variant GeneID:504212|C3H1orf146:NM_001038024:114_cdna 204^297 1 EMBV3_06449 GeneID:504212 3 GENE C3H1orf146 C1orf146 MGC133659 chromosome 1 open reading frame 146 ortholog EMBV3_07960 TCAGCCAGAAAATATCATTCAGACGTTCCAGCTCCAGAACCAGCCTCCCAGGACATTTGG Gene GeneID:514087|SUN5:NM_001046165:1045_cdna Constitutive 0 NULL GeneID:514087 13 GENE SUN5 MGC134507 SPAG4L Sad1 and UNC84 domain containing 5 EMBV3_08098 CTGCCTAAAGATATCGACCTAGACAGTGTGGACATGGATGAGACAGAGAGGGAAGTGGAG Gene GeneID:534755|LOC534755:XR_084701:70_cdna Constitutive 0 NULL GeneID:534755 6 PSEUDO LOC534755 NULL similar to rCG35995 EMBV3_37949 TTGGCCCTGACGTTCTAGCATGTGATTGCTTCACTCCTGGACTATGACTTTCAGTGGGAG Gene GeneID:614967|SUMO1:NM_001035458:140_cdna Constitutive 0 NULL GeneID:614967 2 GENE SUMO1 MGC128420 SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae) EMBV3_22506 ATGAGAAGTCTGCGTGCTACAGGGAAGAGTAGCCCCCGCTTGTAGCAACTAGAGAAAGCT Gene GeneID:541205|THNSL2:XM_002691356:192_cdna Constitutive 2 NULL GeneID:541205 11 GENE THNSL2 NULL threonine synthase-like 2 (S. cerevisiae) EMBV3_00860 AGCAGGTTTATTGAAAAACACAGAACAGGCGACCCGAGTGGCGGCTGGGTGGGCGTGGAA Gene BVT0102_242547 + 0 NULL GK000029.2:45475705-45503290 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164035 TCONS_00164029 TCONS_00164025 TCONS_00164028 TCONS_00164044 TCONS_00164043 TCONS_00164026 1 XLOC_100106 Coding TCONS_00164026 XLOC_100106 Coding Coding C29H11orf80 29:45377197-45503183 j TSS122825 1669 1 TCONS_00164026_3 491 15 0.986871452950748 0.00162260342243261 0.00036026640261312 0.000325928626490801 0.000555327040309352 0.000154157374464295 2.80467268934331e-08 0.00023190765234681 0.000225382895352833 4.19199820327537e-05 4.22693782905271e-05 1.14914140774161e-14 9.966595763417e-25 1.30792789536381e-08 8.31735148142121e-16 8.58574509739664e-18 5.48124292837413e-06 8.72097937169353e-277 4.94158677170637e-05 0.000689991516761985 3.25521559781983e-48 9.73505715275694e-06 0.000265018144606038 0.000119894326815365 1.05558232768472e-23 0.00047754841386497 8.86079406376919e-27 0.000454471581104788 4.87852452391064e-05 0.000168996314752635 2.61852952388808e-17 XM_003588059.2 C29H11orf80 PREDICTED: Bos taurus chromosome 29 open reading frame, human C11orf80 (C29H11orf80), transcript variant X1, mRNA. 0.0 2928 100.00 0.971839424805273 XM_005274286.1 C11orf80 PREDICTED: Homo sapiens chromosome 11 open reading frame 80 (C11orf80), transcript variant X2, mRNA. 0.0 1496 80.54 0.92690233672858 TCONS_00164026_3 sp|Q8N6T0|CK080_HUMAN CK080_HUMAN Putative uncharacterized protein C11orf80; 0.0 706 71.03 0.9979633401222 1 coding 1 1 1 1 -1.17523328664216 0.00568081426993375 -0.00924563150339576 0.885737940240157 GAGATGTGCAGTTGAGAAGCATCATGGACACACTGTGGGACACACAGTTGCTGCTGCAGGAAGCATTGATGGTGGTTTGGTCCTCAAGAAGTTCCTTAAAGATATGCAATCCGTACTGCCTGGATTCTTTGCGAACCTGAACTGGACTTCAGAGGAGGCCAGCCATTCTCAGGACACATCAGGGCTAAGACCCTTCCAGATGATTTTTGAGGCTGATGTAAAGCCCAGGACTTTGATGACAGATAGTCTGGTTATAAAGAATTTTTTACGCAAAGTCATCACTGTGCTCCCCAAGATTAGATTTAATTTCAGTGTAAAGGTAAATGGAATCCTCTCCATGGAGATCTTTGGGGCAGAGAAGGAACCTACTTTGAACCTGTCGAATGGAATTGCTCTTGTCGTAAACTGTCAGCATTACCTGAGTACACCAAAATTTGACACAACTGAATTACCCTGCAGCAGAATCCATCCTGTGCTGGGACACCCAGTGATGCTCTTCATCCCTGATGATGTGGTGGGAATGGGCTTGTTGGGAGAGCTGACGCTGACTCCAGCCGTGGCTCTGTGTCCTTGCCCGAAGGTCTTTTCCAACCAGCTGAACAGGATCTCTTCCGTTTCCATATTTCTGTATGGACCTTCAGGTCTGCCTCTGATATTTCCAAATTCAGAGCAGCCAACTACTCCTGTCTTCAAAGACGCCTCTTATTTCATTGACTGGAAGAAACACCACTTGTGTATGGTGCCCAATTGGGATCTCAGTTTAGACAGGGGTTCGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGGAGAAGATCAGTCTCAGGATATGGGCCCCCAGGGACAAACTGTGCTGCTTTTTCTCTTTGTGGATTTCCACAGAGAATTTCCAGGCCAGAAAATGGAACTCTGGGGAGTCCACACTTTGCTCTCAACTCATCTCAGGGCCATCCTCAGGGAGAGCCACAGCGTGGTTCAGGGTTGCATCCAGGCCGCTGTGGACCGGGCCTTGGAGCAGCATCACCAGGCTGTCAAGGCTCATCAGAAACTACAGGCCTCACTGTCAGTGGCTGTGGATTCCATCATGAGTATTATGACTGGAAGCACAAATAGCACCTTCCGGAAGACCTGCCTCCAGACGCTTCAGGCAGCTGACACACAGGAATTTGGGACCAAGCTGCATAAATCATTTCATGAGGTCACCCAGCACCGATTTGTTTACCACTGCTCACAGGCGGTGAAGCAGCAGCTGCTCCCAGAGAAAAATGAGGCAGAGCAGAACACAGACGAGGCACATGAGAACAGCAGCCTGGAACTCCTTGCAGGGACCGGCGAGCAAACAGAAAACAAGAGGCTTAAGAGAGGCAGCCAAGGCATGGAGGAGACGCGGGCCTTCCGCTCTGCTGGGGCCTTGAACCCTTCAGAGGCCGCCTCGCGCCGCGCCGAGCCCACCGCGGCCCCGCTGACCTTTAGTAGAAGCAGGACGGGCTCCGGGAGCGGCCTGGAGGACGCGCTATGGCTGCAGGAAATTTCCAATCTGTCCGAATGGCTGAGTTCTGGGCCTGGGCCCTGAACCTGCCCCCTTCCCCGCGCTTCCACGCCCACCCAGCCGCCACTCGGGTCGCCTGTTCTGTGTTTTTCAATAAACCTGCTCCGCACGCGC EMBV3_14013 AGGCCAATAAATGGAAAACACCTTCAGATGATGAAGAACTGCCAGCATGCGAATGCTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29822 GACAGCTGACTGTCAAGGCGGGTCTTCTCTCACCTGTTACCTGCTGTCTGAAGTAATAGT Gene GeneID:541155|MTMR1:XM_002699645:134_cdna Constitutive 0 NULL GeneID:541155 X GENE MTMR1 NULL myotubularin related protein 1 EMBV3_05858 CCAAGGGTAGCTATGGCTTAGATTCAGGACTGTCTGACCTCAAAGTTCATGCTTATAACC Gene BVT0101_047127 + 1 EMBV3_04302 GK000009.2:45855546-45960853 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21144 TGAAGTGGTGGCCGATGATGACTCTGGTGAGGAGGGGGTAAGCTGGGAATGTTGTTGATT Gene GeneID:509882|MPP3:XM_002700026:113_cdna UTR3_Alt 2 NULL GeneID:509882 X GENE MPP3 MPP3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) EMBV3_05319 GCCTTAGGGATGGAATAATAGGGCCACTTACCAAACTCAGGTGATTCCAGGATGGTTTGG Gene GeneID:524960|NRIP1:XM_002684642:20_cdna UTR3_Alt 1 NULL GeneID:524960 1 GENE NRIP1 NULL nuclear receptor interacting protein 1 EMBV3_28094 AGATGTGCAGCAAGGACAGAATAAATCTAGCAAATTATTTTCCACCATCTGAAATAACTC Variant GeneID:511003|CXHXORF23:NM_001083665:2_cdna 207^382 5 EMBV3_17172 GeneID:511003 X GENE CXHXORF23 NULL chromosome X open reading frame 23 ortholog EMBV3_04495 GAGCACAATTATTTTGTCTCTTCTACAGTTGTGGTTTATTAGATGTGATTTTTTTCTGCA Gene GeneID:280881|NTS:NM_173945:14_cdna Constitutive 0 NULL GeneID:280881 5 GENE NTS NULL neurotensin EMBV3_23117 GAGAGGCAGGCGCTCAGTCAGTGAGACGGGACAGAAATAATATGAAACAGGGCAGAGAGA Gene BVT0102_024986 + 1 EMBV3_30554 GK000008.2:968097-1023800 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00720 CGTCCAAGGTACCCCTGCTTATTATCCTAGTGGTTCAGGAAGAGAAAATGCAGAGTTTGC Gene GeneID:618577|GOLSYN:NM_001076511:59_cdna Constitutive 0 NULL GeneID:618577 14 GENE GOLSYN MGC140130 Golgi-localized protein EMBV3_29123 CTGAGTGACGGGTGGTTTCCACACTCCTGGCTCTGTCCTGCAATAAGTTCACAAACCCTT Gene GeneID:534290|ANO10:NM_001102169:152_cdna Constitutive 0 NULL GeneID:534290 22 GENE ANO10 MGC179470 TMEM16K anoctamin 10 EMBV3_07313 CAGGATTCTGTTAGGCATCCCCTCCTGTCAAACTAGAAACTAGAGGGGGAAGTGGTATTT Gene BVT0101_065492 - 1 EMBV3_24803 GK000027.2:19067493-19077024 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156116 TCONS_00156120 TCONS_00156119 TCONS_00156117 TCONS_00156115 TCONS_00156118 1 XLOC_094918 Coding TCONS_00156119 XLOC_094918 Coding Coding ZDHHC2 27:19072030-19111671 = TSS116673 3069 1 TCONS_00156119_4 344 13 0.922906155398587 0.000273512193290182 0.000845490707084508 0.000901287814911548 0.000436196280058752 0.000569685172750874 0.000178060056138208 0.000189565484897983 0.000201602720396795 0.000448498303624882 0.000125989864853239 4.17384826437999e-05 3.64354921235901e-20 3.72848469366061e-05 0.000867849698937306 5.82060091899286e-10 0.000336092265428095 1.61767862670759e-07 6.11355700431184e-10 0.000338660594992987 0.000760173700686233 3.2519828555669e-09 4.98538765665535e-13 0.00117470891624549 0.0012235768353368 0.000684266830040096 5.47979562038231e-08 0.000291503695868131 0.000141668349041142 8.61465820567773e-05 4.10341663136324e-07 XM_616436.7 ZDHHC2 PREDICTED: Bos taurus zinc finger, DHHC-type containing 2 (ZDHHC2), 0.0 5427 100.00 0.980123818833496 NM_016353.4 ZDHHC2 Homo sapiens zinc finger, DHHC-type containing 2 (ZDHHC2), mRNA. 0.0 2852 80.76 0.980123818833496 TCONS_00156119_4 sp|P59267|ZDHC2_MOUSE ZDHC2_MOUSE Palmitoyltransferase ZDHHC2; 0.0 654 94.46 0.941860465116279 1 noncoding 1 1 1 1 -0.0267052847838168 0.852858733441309 0.000248289012457437 0.996593367197973 ATGGAGCGGGGCTTCGCCTGTCTTCATCTGGAGTCTTTGCTCTTTAGTTCTGTTATGCTTGTGTCCATGGAAAACATTGGAGAACAAGTTGTGTGCCTGATTGCTTATCATCTACTTTTTGCAATGTTTGTCTGGTCGTATTGGAAAACTATCTTTACATTACCAATGAATCCTTCGAAAGAATTCCATCTCTCTTATGCAGAGAAAGAATTGCTGGAGAGAGAGCCTAGAGGAGAAGCCCATCAGGAAGTCCTTCGGCGAGCAGCCAAAGACCTCCCCATCTACACGAGGACCATGTCCGGAGCAATCCGCTATTGTGACAGATGCCAACTTATAAAACCAGATCGCTGCCACCACTGTTCCGTCTGTGATAAATGTATTTTGAAGATGGATCATCATTGCCCATGGGTGAACAATTGTGTTGGATTTTCAAATTATAAATTTTTCCTCCTTTTCTTGGCTTATTCTCTGCTGTACTGCGTTTTTATTGCTGCTACAGACTTACAGTATTTTATCAAATTTTGGACCAATGGCCTACCTGATACTCAAGCCAAGTTCCATATTATGTTTTTATTCTTTGCTGCAGCTATGTTTTCTGTCAGCTTGTCTTCTCTGTTTGGCTATCATTGTTGGCTAGTCAGCAAAAATAAATCTACATTAGAGGCATTTAGAAGCCCAGTATTTCGACATGGAACAGATAAGAATGGATTCAGCTTGGGTTTCGGTAAAAATATGCTCCAGGTTTTTGGTGATGAGAAGAGGTACTGGTTGCTACCCATTTTTTCAAGTCTAGGTGATGGCTGCTCCTTTCCAACTTGCCTTGTTAACCAGGATCCTGAGCAACCATCTACTCCTGCAGGATTGAATTCATCATCTAAAAATCCTGAAAACCATCAGTTTCCTGCAAAGCCACTGAGAGAGTCCCAGAGCCACCTTCTTACTGATTCTCAATCTTGGACGGAGAACAGCACAAGCCTAGGGAAAGGCAAAGCTGGTATGAGCAATCCTGCACTGACCATGGAGAATGAGACTTAACTCTTCTAACAAAATGTACTCATACTTCATGAAAGTAATGAATGCTGTCGATGGATAGAAGAGGCTTCCCCCAGGAAGGCACCTCTAGCCAGCTGTTCCCATCCCCTTTGGCTGGGTGTGCAGAATGTGAATTGAGTAGTTCTCTCAGCATTTGCTTTTAAAACATAACACATTTTTACTCCAGTATACAGATTGTTTCAACTAACACAAATTCTTCTTAAATATTAAAAGTAGTTATGGTTTATGAATCAAGGACAAAGATACCTATCATAAAAACTTGGAATAAATTCATGGGCCAGTTTTCACCCAGCTATTTGGGTAGCACAATGTATCACATAAGAAGCCCATTGATCCTCTGATTTTCTGATTCAGAAAATTTGAGACTATTAAGATACTGAGATTAAAAGATGTCACATCGCATTATAATGATAAGCTTTATTCATAAAACCTGTTAGTTACCTACGAGAGTGTGGAGGTAGCAGATGAGACTTGTTTACTCTCTCCGATAAGAATCCAGCCTCAGACTGTGTGAACTATAAAAACTATGAATTCATTACAAATTTCAAGTGGCCTGAAGTTGAAGATGACCATCCTTTTTTTTTTCTTGCTAGACTTTATTTCTAGCCTTTTTTGCCTGCTGGAAAAGAAGTATGATAATTGAAGCTTGAGCTCAACTGGCTAGAAAATCTTTGTCAGATTTAATACATTTCTATTACATCAGCAATATATTTTTCATCTCTTTTAATTATCTGAAAATGGGTGAAACTCTGTAATAACAATTATGAAGATTGGTTTATGATACTCTTTTTGGGGTTTGGCTTTTAAGTCTCTTTTTAGGTTATTTCTTCTATTGAACATAGCAGACATAATGATTTTTTGTTAAGAATTCTGATGGGGCAATAGATTAATCCTCCATTGATATCTTTATTATTTCTTTGTCCTCTCATCAGAAGTATGACAGTTAAACTACGTAAATACCTATTAAGATTAAATTATGCAAATCATCAAGCAAAAATCATATACTTTTGGTAATTTAGTTCAATATGAACTAAATGGTATGCTGTTTGGAAACTGAGTTTAAGAGAAACTAAAGTGGTGTGTTTGTTGATGCCAAAATGTTCAGCTTCAGTAAATATACTAAGAAGCTCTTGTGCCTTGTATGCACTGTTTAAGTCTTATTTTATTCTTTTTTAATTTGGTGAAGTGCAAGTTTTGTAAATGTTAGCAATTAGATTACGCTGTATACATTTTTTGGTACTGATTTTGAGGATTTAAAGCAGATTACCTTTTAAGACTACACAGCTAAGGAACTGGTATTTAATCAAAGAGACAGTGGTATTAACTTTTCAAAATCTGAATTAGACAAATTCAGCACAAAGTAGACTGGAAGACAAGAAGATAATGGAGTAACATATCCTTGGAATTCACTCATCCTTGCTAGAAGTATGATGTTTTATATTCAGTGACTTTATGAAAGAACCAGTCCATTTTATAAATCATTTGAGTGCAGTTCTTTGAGCAATAGGATGGTGGTCTTTTTCAGATTTTCTTTAAAGTGAAAGATTTTGATGACAATCTACTTAAAGAAAACTCAGAAGATATGATGCATTCTTACTTTTATCTTAAAGCATTTGGTCATCATTTTCCATTACCTGAAGTGCCAGAAGTCTTAAGGGCAAGAGCATCATATAATGTATCAAGAATTATATGCAGCCAGATTTTTTTCAAAGCACAGTACTAGAGCTGTTTTTATAGACAGGATTCTGTTAGGCATCCCCTCCTGTCAAACTAGAAACTAGAGGGGGAAGTGGTATTTTAATTCTTTACCTTGCTAGAGTACTTTTAATCCCCGCTTTAGCTTTTTCATGTAATTATTGAAATACATAAGTCAATACACATTAGAATCAGATATGGAAACATTTTTTAAAATAAAGTCTTTCTCATTAAGTTGTAAAGTTTCCCTTTTTGGTTTCATACATTGACTAATTTTTAAAGGGTTTTTTGTTTTTAATTCTGTGGGATTATAATTTTTGG EMBV3_31570 TCCCACACGCAAGCCTCTCTGTCTCACGAACTGTGGAAGGTGCCCAGAAACACTACTGCA Gene GeneID:504217|TNRC6C:XM_002696160:104_cdna UTR3_Alt 2 NULL GeneID:504217 19 GENE TNRC6C NULL trinucleotide repeat containing 6C EMBV3_31939 CTGAACCTGATGTGGAGAAAGAAGAGGATGAGAGTGAAGAGGACTGGAAACTGCAGCTGG Gene GeneID:525408|NFKBIB:NM_001075872:649_cdna Constitutive 0 NULL GeneID:525408 18 GENE NFKBIB MGC152142 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta EMBV3_19297 AGGCTCTGGGAATTCCAAGTCTCCATGTGCCCAAGAGTGGGACAAGCAGGAAGTTAGTTT Gene BVV0102_376718 + 1 EMBV3_06157 GK000019.2:51516090-51523264 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21576 AGGTCCTTCAACCCAGGTTCCAAACAACCTTCGCAGTCTCATCTCCAACCACTCTTTCGC Gene BVV0102_098139 + 0 NULL GK000013.2:64691251-64737633 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17098 ATCAGAGGTGCAGGCCACCAATAAAAGCTGTCTCCCAGGTTTTGTGTCTTGAGAGACTCC Gene BVV0101_016152 + 0 NULL GK000012.2:76049820-76346646 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035663 TCONS_00035657 TCONS_00035647 TCONS_00035664 TCONS_00035673 TCONS_00035653 TCONS_00035658 TCONS_00035655 TCONS_00035652 TCONS_00035672 TCONS_00040853 TCONS_00035661 TCONS_00035662 TCONS_00035648 3 XLOC_020968 XLOC_020971 XLOC_024667 Coding TCONS_00035672 XLOC_020968 NonCoding Coding LOC100337370 12:75993956-76144251 o TSS26116 757 1 TCONS_00035672_2 69 3 0.994983166327332 0.000737349769016732 0.000294098810133724 0.000325238752163284 0.000261149720867552 0.000244189203100503 0.000220489182657061 0.000303672732172052 0.00040315085842151 0.000377127579825798 4.86784485617324e-05 5.57443210924378e-05 9.81336043451397e-16 1.29431297108932e-25 8.52635800116801e-14 4.85598317257924e-05 0 0 0 0.000492249678107073 0.000840153130739393 0.000431899181267359 1.758027765782e-09 0 2.77194545755392e-08 0.0011875261712467 0.000685019856275352 5.03611330368139e-05 1.26575996532634e-09 0 4.58447424476199e-12 XM_005213920.1 LOC100337244 PREDICTED: Bos taurus aTP-binding cassette, sub-family C (CFTR/MRP), member 4-like (LOC100337244), mRNA. 0.0 989 91.31 0.903566710700132 XM_005254025.1 ABCC4 PREDICTED: Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (ABCC4), transcript variant X1, mRNA. 1e-100 370 72.60 0.874504623513871 0 noncoding 0 1 1 0 1.32668681735458 0.117221042500175 -0.0106838624132876 0.816686472302866 TTACAAGATGGTGCAACAACTGGGTGAGGCGAAGGCTGCTGTCCTCAGTAAAATGGCAAAATAGGCGTACTTCAAAAGGAGACAGCCAGATATCACTCACAGTGACCATGTGGTTATGAATGTTTCCAGTGGACAGCCCTCAGCCTTCACAATTTTTGAGTCAACACTGTGATTCTCCCATGAGTTCATGTCTATTCCAAAGGCCTTTTTCCAATAGGTTTTGCACTGCATAAACTATATTCTACTTTTTTTTTTTTACACCAGCAACAAATATTTACACATTACAAAATGGGAGATCTCCAACCTCAGTGATTTCAATCTCTTGAAAAAGGATTTATGATGTTTATTTAAATGTTATATTACTTGTTTTCTTATCCAAATCAGAGGTGCAGGCCACCAATAAAAGCTGTCTCCCAGGTTTTGTGTCTTGAGAGACTCCAGAGCCAAACTCATTTTCTAAGATTTGAGACAAAGTTGTCACAGATGTTTTTTTACTGTTCCCCGAATTACATATTACTTTCCAATTATATCAGGGATTCTGTTTATTTGAAGACTGTGTGAAGTTACTGTTTTGTGTCCACTTCCTTTAACATGACTAGGATCCATTTTCCCACCAAAAGACCTCTGATTAAAATACTATAGAGAAAACTGATAGGATAAACATACAATATACTATAGTTTAAGTAACCAAAAAAAAAAAAAAAAGGGGGGGGGGTATATGGTTAAATACAGAAGGACAATATCATATGTTCTGAAA TCONS_00035661 TCONS_00035661 s 5' 0 TCONS_00035668 TCONS_00035669 TCONS_00035670 TCONS_00035671 s 3' 24288 EMBV3_22535 TCACCTGCGCCCCCGCGGGGTCCGCGCTGCACTCCTTCGCCATCACCCTCTGGCAGATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14415 ACCTACAGATGCTACGGCTCACTCAGCACAGACCCCTACCTGCTGTCACAGCCCAGTGAG Gene GeneID:100336958|LOC100336958:XM_002695436:4_cdna Constitutive 0 NULL GeneID:100336958 18 GENE LOC100336958 NULL leukocyte immunoglobulin-like receptor B2-like EMBV3_34255 TCTGGACTCCACTGAGGTACTTCACCATTTTGACTTGGTTTACCTAACCCTGCTCATCCC Gene BVV0102_106160 + 0 NULL GK000021.2:55579808-55600866 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07921 GATACTTGCTCATGAGAAGTTCTTTAGAAAAATACAATGAAGGACTCAGTTCAGATCTTG Gene GeneID:511605|CHAC2:NM_001075528:86_cdna Constitutive 0 NULL GeneID:511605 11 GENE CHAC2 MGC139755 ChaC, cation transport regulator homolog 2 (E. coli) EMBV3_38115 TGCACCAAGGCTGTAGCTGGGCTACGTGATCTTGCTGGAAGTGTTTCTAAAGATAGCACC Gene GeneID:781625|PLXND1:XM_002697122:58_cdna Constitutive 0 NULL GeneID:781625 22 GENE PLXND1 NULL plexin D1 EMBV3_02084 GTTGGTTTTGCGGTAGAGTATTTGACAATCAGGATGCTTGGGCTGGTCATGGACAGAGGC Gene GeneID:524691|ZNF518A:XM_002698407:335_cdna Constitutive 0 NULL GeneID:524691 26 GENE ZNF518A NULL zinc finger protein 518A EMBV3_32233 ACTTATGCGGGGCTAGGGAGTGAAGTTCCAATGAGTGGCAGGAACTGTGTCTGAGAACCT Gene BVV0101_026096 + 0 NULL GK000013.2:33830943-34063017 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048110 1 XLOC_028242 NonCoding TCONS_00048110 XLOC_028242 NonCoding NonCoding - 13:33849087-33849428 - TSS35286 341 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000442873342667658 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0717910310077806 0.528811690732013 0.0951543184905551 0.0981168029679874 CTGCAGACTCAGCTGTATTTCCATACAGACCTTGGCTGCCCCCCGTCCCAGCCGCCCTTCTGTTAAATCACAGTTCTGTCCCCTCCACTTTGTCCTCCACCATCTCAGAGAAGAGCCGTTACGGTTTGGGAAGGCCTGGTCCAGGGACTTATGCGGGGCTAGGGAGTGAAGTTCCAATGAGTGGCAGGAACTGTGTCTGAGAACCTGTGCCCACTGCTGCCTGGGGGCCACATGCCAGCCAGCTGGTCTGCCCTGTCGTAGGTGGGTTCCATAGTGGACCTTGGGACAGAGTTCACGACAGGGCTCCGAAGGACCTGCTGACTGGTCAGACTGCTCAGTGC TCONS_00042522 TCONS_00042525 TCONS_00042526 TCONS_00042527 TCONS_00042528 TCONS_00042529 TCONS_00042530 TCONS_00042531 TCONS_00042532 . 3' 17285 TCONS_00042522 TCONS_00042525 TCONS_00042526 TCONS_00042527 TCONS_00042528 TCONS_00042529 TCONS_00042530 TCONS_00042531 TCONS_00042532 . 3' 17625 EMBV3_00823 GTTTCTTACCTGTGGTGTGTTTTACCCAGCACCTCCGGACACTCACCTGCAAGACCTTAA Gene GeneID:521864|VPS35:NM_001046258:285_cdna Constitutive 1 NULL GeneID:521864 18 GENE VPS35 MGC128544 vacuolar protein sorting 35 homolog (S. cerevisiae) EMBV3_26063 GTCCAACACGGCCATCAAGGGGTCGGACAGAGCAAATGGACGAGCTGCTGCAGACGTGCT Variant GeneID:511844|LGTN:NM_001035104:55_cdna 126^838 3 EMBV3_15786 GeneID:511844 16 GENE LGTN MGC137442 ligatin EMBV3_07220 TGCCAAAGGAGACAACAGGGGGAGCCGTTACAGTGACACACAAACAACTTACAGATTTCC Gene GeneID:537183|TNPO3:NM_001098090:6_cdna Constitutive 0 NULL GeneID:537183 4 GENE TNPO3 NULL transportin 3 EMBV3_42786 AGGTCATCAAGACTTCAATCACAGGACAGTTCAGGCTTGCTTGGACCTCCCCACTCACTT Gene BVV0101_073418 + 1 EMBV3_38788 GK000002.2:107574110-107620511 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111427 1 XLOC_067327 Coding TCONS_00111427 XLOC_067327 Coding Coding - 2:107576261-107577297 - TSS83048 1036 1 TCONS_00111427_2 82 0.204633204633205 1 0 0.000380854641776796 3.87970047354569e-05 1.78648656072396e-05 0 0 0 0 0 0 7.94306961090615e-06 2.20963744693076e-06 0 3.04653727560279e-05 0 0 0.000280431803403891 0.000448710110336819 4.84378741581444e-05 6.92174179282227e-06 0.000527557313485022 0 0.003022714097583 0.00061986718136019 0.00149684152675547 0 0 0 0.000537741304122782 4.21732279470101e-05 0.000649972821046156 XM_005202859.1 WNT10A PREDICTED: Bos taurus wingless-type MMTV integration site family, member 10A (WNT10A), transcript variant X1, mRNA. 0.0 1757 100.00 0.939189189189189 NM_025216.2 WNT10A Homo sapiens wingless-type MMTV integration site family, member 10A (WNT10A), mRNA. 0.0 749 76.27 0.939189189189189 0 coding 0 0 0 0 -0.00605733728584001 0.952930647803181 -0.010804207135029 0.838242692207821 CATCCGCCCGCACAACCGCAACAGCGGACAGCTGGAGCCCGGTCCCGCGGGGGCACCCTCGCCCGCCCCGGGCCTTCCGGGGCCACGGCGCCGCGCCAGCCCCGCCGACCTGGTCTACTTCGAGAAGTCGCCCGACTTCTGCGAGCGGGAGCCGCGCCTGGACTCGGCGGGCACCGTGGGCCGCCTGTGCAACAAGAGCAGTGCGGGCCCTGATGGCTGCGGCAGCATGTGCTGTGGCCGCGGCCACAACATCCTTCGGCAGACACGCAGTGAACGCTGTCACTGCCGCTTCCACTGGTGCTGCTTCGTGGTCTGTGAGGAGTGCCGCATCACTGAGTGGGTCAGTGTCTGCAAGTGAGCCGACGGCTCTCCTCCCTCAGGCTGCTCCTCTGTGGCGTGCGATCTTGGCCGAACATCACCTTGGTTCCTGGGAGTGGAGGCTGGACCACGAGATTTTATAGGAACCTCCCAGCCCTGAGGTCATCAAGACTTCAATCACAGGACAGTTCAGGCTTGCTTGGACCTCCCCACTCACTTCTGTGGTCTCCAGGACAGATTTTGCCTCCCGGATATCTGCCCCAAGCTCAGACAGCTCCGTTGGGCTGGGGGTTGCCCCACACTTTAGGGCAGCGTCAGCCAGGCATGCTCTGGGCTTGCTCCTTTATCTCTTCACCTCTTCCCCTGGAGTGGGAGGAAACTAATGGAACTGGTGGGTAGGGGGAGGAGGAATACAAAGAAGAAATGGCCATCACTGAGCTGAAGTGTTTCTGCAGAGGCCTCAGAGGTTCTCCTCCACCGGCCCCTGCCCCTCCTCGTTCATTTAACAAATATTTATTTTGCACTCTTTGTGGCCTGGCACTCTGAGGGGATGAGAGGTGCTGGGAATACAGATGTGAATAAGAGACACAGCACCTACCCTCTTGGAGTTTACATTCTGGCTGGGGAAGATGGGCAATAAATAAGAAAATGCACAAGCAAGGACATTTCAGGCAATGCTGTGTGATGTGAAGAAAATAAAGCAAGGTGCTGGATGTAG TCONS_00103320 . 3' 2153 TCONS_00103320 . 3' 3188 EMBV3_03527 GAGACTGGTCCTGGGGTCCTGGGAGCGCTGATTGTTGATCCATTTCAGATAATTATGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03814 CATGCTACAATTTCCACTTGACCTGGCAGTACAGAATGTCGTGTGCCCCGTGTCCATGAC Gene GeneID:100125281|TMEM26:NM_001103163:2_cdna Constitutive 0 NULL GeneID:100125281 28 GENE TMEM26 MGC159697 transmembrane protein 26 EMBV3_14290 TGGCCTTCAGTGCAAAGACTTTAGACCAATTCTTTGTATTACACTTGGTTGCCTCTTGGC Gene BVV0102_162615 + 0 NULL GK000002.2:4548728-4554333 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101496 TCONS_00101498 TCONS_00101500 1 XLOC_061695 Coding TCONS_00101496 XLOC_061695 Coding Coding AMMECR1L 2:4531882-4551999 j TSS75842 4996 1 TCONS_00101496_4 310 8 0.752038178564327 0.000426966060077609 0.000469888754531499 0.000486083451532835 0.000476394004543306 2.93790232127493e-05 0.000224760319951893 0.000254572992248048 0.000241382353168839 0.000814431937923343 0.00159244042159068 0.00119155743217235 0.000276714451758066 6.75555021749123e-05 9.29526421494153e-06 0.000206501451405927 0.00369633353205283 0.000729995572691974 0.00929990772627384 0.000163821164002613 1.79257991429564e-21 3.22151358718916e-08 0.000653653141233173 0.00106011517615498 0.000799955375775766 0.000192566776119256 0.000368544030707528 0.000269285458997581 0.00108213888467307 0.000605866901870985 0.000619762539038779 XM_005202207.1 AMMECR1L PREDICTED: Bos taurus AMME chromosomal region gene 1-like (AMMECR1L), transcript variant X1, mRNA. 0.0 8765 100.00 0.97257806244996 NM_001199140.1 AMMECR1L Homo sapiens AMMECR1-like (AMMECR1L), transcript variant 2, mRNA. 0.0 5817 87.71 0.935948759007206 TCONS_00101496_4 sp|Q6DCA0|AMERL_HUMAN AMERL_HUMAN AMMECR1-like protein; 0.0 645 99.68 0.996774193548387 1 coding 0 0 0 0 -0.0348111515610881 0.777515112690417 -0.0143964496263975 0.815081803046897 CTATGGTTTTGGCGCCTCGCTAGAGGGCGTGTGGTCCACTGGAGGACTCCCTACATTCTTCCTCCATTACCTCACTGCCTCCGGTGGCTGCTGGGATACCGGAAGACTCGGGTCCCGACTCGGCTCAGTCCTCCAGCTGCCCGGGGAATACCTCTAGCAGTTCTTCCCCGCCGCCACCGCCGCCCCGCAGCTTCCTCCTCCGCCCGCCCCCTGCCGGCCTTCTTGGCCCCGCCCCGTCCGCGCCGCGCGTCCGGCCCGCCCGCGGCCCGCTTCTCTCGGGAGCCCCCACCCAGGCGCATGGCTCCATGAAGCAGGAGGAGGAGGCAGAGCGCGAGAGGTCCCGTCTGCCCCGGCTACGTCTGGGCCAGGAGAAAAGGTACAGGAAGAAGGAATGGAATCAGAAGGAAGAAAATTCATTTCAGAGACAAAATAGCTCCCCTCCTCTGTTATAGCTGTTCCCCTGACAGTACAAACTCTCTGCTTTCAGGTTCTGCAGCATTCCGGACCTCAAGCACTGAATCAGGATGGGAAAAAGACGTTGTGTCCCTCCACTTGAGCCCAAGCTGGCAGCAGGTTGTTGTGGGGTCAAGAAGCCTAAGTTGTCTGGAAGTGGAACGCACAGTCACGGGAACCAGTCCACAACTGTCCCCGGCTCTAGTTCAGGACCTCTTCAAAACCACCAGCATGTGGATGGCAGCAGTGGTCGGGAGAATGTGTCGGACTTAACTCTGGGACCTGGAAACTCTCCCATCACACGAATGAATCCCGCATCGGGAGCGCTGAGCCCTCTCCCCCGGCCCAATGGAACTGCCAACACCACCAAGAACCTGGTGGTGACCGCAGAGATGTGCTGCTACTGCTTTGATGTCCTCTACTGTCACCTCTATGGCTTCCCGCAGCCACGACTTCCTAGGTTCACCAATGACCCCTATCCACTCTTTGTGACATGGAAGACAGGGCGGGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATGAATCTTCATTCAGGACTCAGGGAATACACGCTAACCAGTGCACTTAAGGACAGCCGATTTCCCCCCCTGACCCGAGAGGAGCTGCCTAAACTTTTCTGCTCTGTCTCCCTCCTTACTAACTTTGAGGATGCCAGTGATTACCTGGACTGGGAGGTTGGGGTCCATGGGATTCGAATTGAATTCATCAATGAAAAAGGCGTCAAACGTACAGCCACTTACTTACCTGAGGTTGCGAAGGAACAAGACTGGGATCAGATCCAGACGATAGATTCCTTGCTCAGGAAAGGTGGCTTTAAGGCTCCAATTACCAGTGAATTCAGAAAAACCATCAAACTCACCAGGTACCGAAGTGAGAAGGTGACAATCAGTTATGCAGAGTATATAGCTTCTCGACAGCATTGTTTCCAGAATGGCACTCTTCATGCCCCGCCCCTCTACAATCATTACTCCTGACACACGGCTGCATGACCAGTCACACCCCCCCGTGGCCACCAATGGCTATGACATCATTGGAGCAGATGCCTCCTCTTCCTGGTCCAGTTACTTCTATTACTGCACCATTTTATGATGCTAGCTTCCGTTGCCAAGTCTGCCTCCAGCTGACTGAGGTGGGAGGGGGGGCTTATACTGAATGAAACAGAACTTGAGGGCCCAAGCCTTATCTCAGCCTTTCCTCAATACGGGGTTCCGTTGGACTGGGGCTCCTCCATGCCTAGTGAGAATTCCATGTGGGCTCAGAAGACTTGGGCATGCAGGTGCCGCTGCTGATGTGCTGCCTGTGTGTCGGACACACAGTGGAAGCTGGAATTGATGGTCCATGAAGGCTTACCCCACACACACCTGCAGCCTCCCCAGATCAAGTAGGTGTATTCCCCTGGCAGTCTGGGCAACGGAGACCAACAAGAAACATTTTTAGGTTGTTTTAAATTCCTTTTTTTAAACTTGCAGTTTATTGCGTACTGAGAGTTGATCACAACCTCCATGCTTCATAAGCGGACGCCATGTTAGGGTCAAACGTGGGCACCATGAGTCCTCCGTGGCTCCTGGACAGAGACCCACCTCAAGATCAGAAGCCCTTTGGATGGCGTTGCAGATCTCATTGCTCAATTAGCCTCGAAGGTTCTAATTCTCATCCCACTCTCAGTTGGATTTTCTGGCACTCTTCCTGCATCGAGTCTTCTGGGACTGAACCAAGCTCTGTGGTTTGGCCTGCTGAGGATGGACTGGGATGCCTGCGGGAGGTCCTGATGGCATCACTGCACGCAGTGTCAAGGGAGAGACCTCTTCCTTACCACCTGGCTACCTCACTCCTCTACTGGTAGCAGTGCCTATAGCTGGATCTAGGTTCTCAGAGACGTTCCAACAAGCACTTGGGTTGGGTTTTAGAAGGATACGTCGTCATAGGAGAGAATCCAGGGTCTCCAAGCTGTTTTTCTTTTCAGGCAAACATCCTGAGAGACCTTTAAGCAGAGGAGTTCCTTTTTCTAGTTTGCCTGTAGAAGTGGGAAAACTGTTAATGTTTCAGTCCTTTATGGGGACTTTAGACAAAGCTGTGTAATTAAACAAGGTGAATCTTTATCTTGCCTAACAGGCTGGGAAAACATCACCCCACTGTGGCAGAGTTCCAAATAGCTTGTTTTGTTTTAGGTCATTCATACTTTCATGTGGCATATTTCCCTTTCCCATTTTTGCTGATTCCAAATAGCTGTCAGCAGGTTTCTCCTTCCTCTTGCCTATTCTTCACTCATATGGTGGCAAAGTTCATAGAAGTTGGGAATTTGGAAGATGCTTTGACAACGTTGTCACAGAGGCACTGCTGAAGTGATTCACAGGGAGAGGTGGCCAGTTGGAAGAAAAGACCCTCCAGGTGATACACTGGTTTCCAACAATATGCTTAGAGAACTCTAAAGTGGATTGGGTGTCAACCCAGTGAACACAATGTTTTGATTTAATTTATTTTTAATGTTTATGTGGTAGTGGTGTGGCTTTCCGAAATGGGCAAATATTCAAGCAAAAGATCTTTTGAGTTTTCTTCTGCCAGGAGCGGGGGGCGGGGGGAGCAGGGACAGTCTGAGGAATGACACATGCTTTTCTAGGCATAGCAGTCCTGTTTCTTGAAGAGAGGGGTTAGGGAGAGCAGTGTGCTTGGCACCATCCTCTGCTGCTGTTAAGGATGTGGAATGTGCAAGGGAAGCGTGGGCTGATGTCCAGGTGTGTGGGCCAGGCTCCAGCACCAGCTCGCTGCTGGGCACACTCCCACATCCTGCCACCTTTCCCTCGCAGTGTTAATGAAAACAGGCTTCTGAAGATGAAGGAGTTGTTTCATGATTTCCTGCTGCTGAGAATAATAAATGTCTTGTTACAAACAAATGTGACGACAGTTACTTATAGGTGCCATGGATTGATGTCAGGGTGGTCAGCTCTGGACTAAACCACCCACCTCCAATTTGTACAACAGTATTGATACATAGGGCTACACTCATTACTGTTCAAGTCTTCTATGTTAAAAGTTGTGTTTAATTTCTAAAGTTTAAAAAAAGCAAAAAAAATGGTGCTAAACTTTCACCCCTGAGCACGCTCAGTGAGACTGGTCATGCAAGCATTTACAGTGCCATGCTCTTTCAAGCCTATTTTTTCTTGTAGAAATGTTGCCCTATTTGTCTTTCCCAGTGTATAGTATTTTTTTTTTTTTAATTTTATTGAGGGTGGGGTAGGAAACCTGCCATTTAAGAAAAAAACAAAATTTAAAACCCCAGGAAATGGGGGGAAAAAAATCAGTGCACAAGAATCGGGCTTAAGCCCAGAACCACACTGAAGTGGGCTCAGTGGTTTTTGGAGTGAAGAAGCCTTACTCCCCGCACATTCCCTTATGCTCCCATCCGAGTCCAGCCATGGAGATGCTCGGGTTCCTCTGACTTTAGTAAGAGGACTCAGGAGTCGACCAAGGAAAACTGTTTGGCCCTGTGAGGAATGGCACTCAGTGTCTGTCCTGAATGGAGCCTAGTCAGGAAGTGGTCTGGAAATAAATGGTCATGGTCACCTTATGAAGATGTGTGGCAGGTGGCTCTCAGGAAAAATACTAAGTCTGGATCATCCATATGGCAGCTTTGCGTAGGGAAATGACAACTCCGAACTGGAACTGACCTGCCTTCCATGTTGCTTGACCAAAGCAGTGATGAGGGTGGCCAGTATATGTAGTGTGAGTGGTAGGTTTAAAGAGAAGGGAATGTTTTCTGCTCAGTGTTTCCTTTGTCCTTGGACTGCTCAAGCTGAACAGTAACCACTGTTTTTAAGGGACCAGCCCACTGTGGCTGGTTTGGTTCGGAGTTCGTTTCATCCCTAGCTGTGAGTGCCTTTCGGTCTGGAAAGTTGGCTTGTCTCATAATACCCACAGCTAGGACATTCTGTAATTTCGAATTGTCCTTGTTCTTCATTAAAAGAGAATGTCTTTGATCACTAGAGTTTATCAGTGTTGGATTGTTTCCACTGTGAGATTCTTAAACTTTTTCGCTTCATAATATTAAAGCAACTCATGTTAGAGACCATTTCAACACGAAAGGTTTGTAGTTCAGACATTACATATATTTTATTGTTTATAATAAAAATCATCTATACAGAAGTCCTGGGTGTTAATATTTGCACAAGCTCTGTTTTCCATGGTATGTTAACACCTACAATTTCACTAACTGTTGATGTTATTTTCTATTGAGATCCTGGAACCTAGGGAGCTATTTGTTCTTTTTGTTTATTTTCATTCTTATTTCCCTGAAGCAAGAGACTTTGTATGGCCTTCAGTGCAAAGACTTTAGACCAATTCTTTGTATTACACTTGGTTGCCTCTTGGCTATATAACTTCTGAGTGCAAATCATTGAACTCTTTAACAAAGTATTGTAGAGAATAAATCATAATGGGTAAAAATTGTTCTTTGTCTTGTCTTTTTTTTTTTTTTTTGAATAGTAGATAGTAGTACTTTTTGAATAGTCATTATTTA EMBV3_32346 TGGGTTTGTGAACCATCCTGCAAATCCAGTGCTCTACTATAAGGACACCGCCACCTTTGG Gene GeneID:281006|APOH:NM_173992:4_cdna Constitutive 1 NULL GeneID:281006 19 GENE APOH MGC140489 apolipoprotein H (beta-2-glycoprotein I) EMBV3_12441 CCGCCGAATCATGTCGATGAGTCCAAAGCACACGACTCCGTTCTCAGTGTCTGACATCTT Gene GeneID:613713|NKX2-1:XM_002696708:103_cdna UTR3_Alt 2 NULL GeneID:613713 21 GENE NKX2-1 NULL NK2 homeobox 1 EMBV3_41916 CCGCGCTCTGCGACCGCCGCGGCGAACATGGGCACCAGAACTAGCTCCTCTGAAGAGTAA Variant GeneID:513267|DSTN:NM_001015586:40_cdna 55^362 1 EMBV3_41267 GeneID:513267 13 GENE DSTN NULL destrin (actin depolymerizing factor) EMBV3_38794 TTCTGAACTTGCCCTCCTCCTGATGGCTGCTAGCCCGCTTCCACTTTTAACTCAAATCTG Gene BVT0102_008547 + 1 EMBV3_16520 GK000006.2:13272315-13381577 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202472 TCONS_00202470 TCONS_00202481 TCONS_00202474 TCONS_00202479 1 XLOC_123983 Coding TCONS_00202481 XLOC_123983 Coding Coding CAMK2D 6:13265947-13274174 j TSS151946 5274 4 TCONS_00202481_4 109 0.0599165718619644 2 0.359105275954291 0.00049022579130874 0.000247773426179552 0.000197345650093122 0.000281640710571631 0.000340441094970621 0.000102446813698216 0.000145790236278813 0.000453428045903877 0.000474422128828315 8.82846148872456e-06 1.3773565672665e-06 1.02327354492277e-05 2.01975622758518e-05 1.69586767068755e-05 0.000198200108729303 1.23699466469676e-81 1.27322714092901e-34 4.29204638617475e-170 0.000423242168951946 0.000556567529666756 0.000128946699211019 1.07010793704884e-57 1.68979625069438e-123 0.000170919197256769 0.000350593994916142 0.000535562629587187 0.000110942869097336 2.17219428334959e-59 2.49939390255478e-06 4.00522676115515e-156 NM_001046333.1 CAMK2D Bos taurus calcium/calmodulin-dependent protein kinase II delta (CAMK2D), mRNA. 0.0 3119 99.83 0.329351535836177 XM_005263256.1 CAMK2D PREDICTED: Homo sapiens calcium/calmodulin-dependent protein kinase II delta (CAMK2D), transcript variant X6, mRNA. 0.0 2233 73.62 0.67993932499052 TCONS_00202481_4 sp|Q2HJF7|KCC2D_BOVIN KCC2D_BOVIN Calcium/calmodulin-dependent protein kinase type II subunit delta; 2e-50 169 100.00 0.697247706422018 1 noncoding 0 0 0 0 -0.0490207525303791 0.665530165579257 -0.00525278275064811 0.911466991801363 CAGTGCTCATTTCCAAGGTAAAAATGTGTATTAAGATGAGTAATGAGGTAAATATTTATTCAGATTACAAGAATTTTAATGGTATCAGATAAAATAAAAGAAACACCTGCAGAAATCCTCCAGGTCACCAAAAAAACTATAAAAGAGAAGTTCCTCTTATCCTTCTCCTAAAGACATTAGGTATAAGGTATTTGCATGATGCAGGGAGTAAATTTACCTTTTGCAATAAAATTTTTATGAATTAAAGAGGAATCATAGTAATGATTCAGATAATCAGGTTTATGTCCAGTAATTATAAGCATTAACAAGAATATTTGCGTTGGCACGCATTTTCACATTCAATGAATTGCTTTTTCTTATATGCACTAGATATTTGCAAGGAAACAAAGATAATTATGTGGTAAACTGGCCTTAACAAAACTTCAATAAATGTTCTCATATTCTCTGTTTCGTGCTGTGATTGACAGCATGTCGTAATGTTTCCTTCAGTAGGCTGTAGCTTGATACCACCTCATCTGTAGTAAACGAATAATGAACCCATTAATATTGTAACCTACCTCAACATAACACTGCACTTCATTACTCTCCATAAATACATATTCATAATAATGGGATATTGTTTTTTATCAGACTGTAGCAGTAAGTAATTAATTCAGATTGTTCCTAAGAATGAAGGATATGTTTGGATAACAGGTAAAACAGTTCTGCCTGTTTTAGTGATCAAAGAGAGTAGCATCAATCAATATCTGCACTAAATCTTCATCTCTCTTAGTCATTGAACAGTCAGAATAAATAGATGTTGTCAAAACAACAAAGGCTGGAGCCTATTGAAGTGAAGTCGCTCAGTCGTGTCCGACTCTGCGACCCCATGGACTGTAGCCTACCAAGCTCCTCTGTCCTTGGAATTTTCGAGGCAGTAGTACCGGGGTGGGTTGCCATTTCCTTCTCCAGAGGATCTTCCCGACCCAGGGATCAAACCCGGGTCTCCCGCATTGTAGACAGACGCTTTACCATCTGAGCCACCAGGCAAGCACGGAGCCTACTGAGGGCTGCTCAATCCAAGGAGAGAGCTAGAGGATCAGAATCAGGCTATATGGCCAACACCAAATTTTGGATTTTTACTGGCTAACCATAATTGGACTACTGGAATGGACTGTACTAAATAAAGGAGCCACTGGATGAGATGGGGAAACTGATTCACACCATGGCCAGCCTATTTAGAAGACAGCAGTCTCCATGCTTAATACATGATGTATTTCCCTTGCCCCAAGTACTTTACCAACTGGCGGAAAAAAAAAACAACAGCCCACAGGAAATCCTGTCAACTGTCCCAGCGGTTCTTTATTGGAAAAATAAGCTGCTCTGTGCACCTGGGCCAGCCCTCCTCCACCTCTGTTCATTTTATGGCTTGTTCCTAACCACTTCCCATTATAAATAATTATGTCTCTCCAGCTTTTTCACCCAAAGTTTGAGTGGCGTACAATTTACCCACAAAGAAAATAATGACTGTATCTACTTCAGCTATTTTTCTTTATACTTTGCACTCAATTCTTTGCGTTAGTGAATAGTTGAATGAATGAATGACATTCTATTTATTGGTCCCAAGGGAAGTTGTTATTGGTTTCGGTTTACTCTGCATAGAAACTAAGCTCTCTTTTCCATGTTCTTCTCTTCCAGCTTTGTCCAAAAGCAATAAACCCATCCACACCATCATCCTGAACCCTCATGTGCACCTGGTGGGCGACGATGCTGCCTGCATAGCGTACATTAGGCTCACCCAGTACATGGATGGCAGTGGAATGCCAAAAACAATGCAGTCGGAAGAGACACGTGTGTGGCACCGCCGGGATGGAAAGTGGCAGAACGTTCATTTTCATCGCTCGGGGTCGCCAACAGTACCCATCAACTAAACATCAGCAGTGCCACTTCTGCAGTCCTCTGTTCTCAAGGCACCTGGATGGTAGCGCTGAGCCGTCCTCCCTCCTCTTCATGCATGTTTCCGAGTGCATGAAGTTGTGAAGGTCCTCTGTGTAATGCCTATGTGATGCATCACCTTGTCATAGATTCCTTCCTATACATTGTTTACACTTCAACTACGGGGATGTTCCATGCAAACTTCAATCATTGTCGGCAAACAATAGGGGGAGGTGAGCAAAAAAAAAAAAAAACTCCGCAATATTCCTGAGTACAATCTAGTCATCCAGTTTCTCTGTTTATGCCAAGACTTAACAGACTTCAGAATTACCATTCTCTGAATGAGAGTTTGTAAGAGAAAAGTAAATTTTTAAAAACTCTTTGCTGTTCATATGTTTTAGCTTGTTTAACAAAAAAAGTCAAAAAAACAAAAACTGACCTTCAGTTTCCTGGTGTGATCCTGGCTGCAATGGATGATTTTTCACTGAAAGCTGTGTTGCTGTTACACAAAGTGGGTTGAATCATTTATGAATGTGGGAGTGAGAATTAGTGGGTTTGCTATGATCTAAAGTCATGTCTTTTTTGGTCAAACTACATAAACTGGAAAAACTCCCATCGCTGACAAGTTTGATCACTTTAGGGTATACGCTTACTGTTCTGGTGAAATTTGCCGAATTGAATTTTTTTGTTCTTTTCTCAAACCTGTGCTTTTTAATTTTTTCTTCATTTTCTCCTATTTCTTTATCACTTTTGTTTGCTTCTTTTTGTATCTTTTTTTTTTCATTCTTTATCTTTTTTTTCCTGTTTAGTAGTGTGAATAAAGTGAAATTTGCATAATGAAGGTAAAATAAAAACTGAGGCCTCTTGGAGGTGGCTGGACTCATACTTCGAGCATCTTCAGGGCCCACAGAGATGAGGTCAAGAAGCGCTCAAAGGTTTGTAATTCTGCTCTAATTCGGACATAGGGATCCTAAGTTGGAGATATTAGAACAGTTTAAACGTATAGGAAAGCAAGTAGGATCCTCCTGCACCTGCAGCATGTCTTACTGAGTGGAGCAGTTGCCAGGACAGCGCCCAGCTGGTCATGGATCTGGATTTTGTGCAGAGGCACTTTCTTCTGCCTCGCCCCTCCTGCGTGATCACTGCCAGGCTTTGGAAGTTCAGAGGATGGGGAACACTGCAGGCCTCTCTGAGTGTTTTGAACACGATCTATGTGACTCGTGGTTTTGTAGCTACTCTCAAAGTCTGAGTAAAATTACGCTTCCCTTCTAGGAGTTGTTAGGATTTTCCTGCTTAAAAAAAAAAAAAAAAAAAAAGGGAAATGTCCCTGTTTCCTTTGTGCTTCTCATTTTTCCCTTGTTTATTCCATTCCTGTGGGGCTTTTTCTCCTCCCTGAAATGCTTTATAGTGCATGGTATCTTCATCAACCTTATTTTAACAGCAGTAATTCACAATCCTCAGAAGCCTATTTTTAAAGCAGAAGCAAAAAAAAAAAAAAAAACAAACAAAAAAAAAAATCAACCCTCCCTCTTTTCCCTCATTTCACGTTTCTGTGTTGATTACTAATCACCTTAGATGTTGTTACTAGTGGATGTATGGTAGATGGATTGAAGCTTTTCTGATAATTATTACACAATTTAAAACAATATATATTTAAATATATACAGTAAATGTATTGAGCCATGTTAACCTGCCAATGAGATCTGTGAAAAAGTAATCGCCTCATTTTTCCCTTTTTAATTTCTTTTACCTTTTTGTGAAATGGCTATACGTGGCATACATGTATTTTAGAAAAATATTAGGTATAGAGTTTTGTTTTTTTTTTTTTACACTTTAAGCATGTGGTGTTGAAGTATTACTGTAGATCAAGTTTGTCTTCCACACTAAGATGTGAGGAAATTGTGATTTGTTCTCTCCACCACAACAGAATTACACAATTATCTTCTCTCATTTTGAAACACTGCAGTTTACCATGGGACACTGTATATATTTCTTGCCATAATGGTAAATGACTGATTGATATATTTAAGACTTAATAAATTTGTGATTTCTGCTGACAATGTGTCCACTTTTATTTCTTCAGGGATACTCTATTTCTGCATGTGTGAGGCTGGCTAGTGCCAATGGCCACACATCCTATATGGTCTTATTATTACAGAATTCACCTTTGACATTAAGATGAAGTTACTGAACTGAGCTTCCCTCTAAGAATGAACTTGGCGATAATGACAATTTACTGTGTTATTTGTGTGCACAAAAGAACAGTCTCTCCTAGGAAAGTTTTTCTGAGAACAAAGCACTTGACACAAGAGTCCTAAAAATTTCTGAACTTGCCCTCCTCCTGATGGCTGCTAGCCCGCTTCCACTTTTAACTCAAATCTGACATCTGACTATGTAACACTTCTGGATCATCGCCAATATTCAGGCAAGCACCTCATCTCCTGTTACTCCAGCTTAAATCTGAGTGTACATAAGTAGTGAACTTTGTTCAGTTTATTAAACGCCCTACCACACGAGGTTTGTTTCTAACCTAGAATATGCTTCCCCTACTTCTTCAACATAACTCATACTCATTCTTTCAAATTCAATTTAGAATAACATCCCCTCCAGCAAACCTCCCTAGACCATGCTGTAAGCTCACTCGTTCTCAATACTTGCATAATGGTTGGTGTTCACCTCTCCCGCCCAGCACCTTGGTTTTGGAAATACATCTTTATTTGTGTCTTCTCTGTAGGCAAGAACCGTGTGTGTGTATCTGTGAACCCACATGAGATGTTAGTAACTATTGAACCGTGGGCAAACCAAAACCGGGGAACTCACAGTGTAGAGTCCTGGATTTAACGTTTGGCTCTGTTGTCTTTGACACTCTCAGCGATTGCCTCTTCCCTCTGAACCTTCATTTTCCTATTTATAAAATGAAAAAATACCAATTAATAAGGATATGTGAGGGTTTAGAGATAATGGATAAAGAGTACCTAGAATAATATTTGGTGGATAATATTAAGTAGCAGCAGCTATAATTGTTCCAATCACTGATACTAATATTCCCAATGTTCTGGTTATTCCTTACTTAGACGTGTATATAACTCTTATTTTGCTATGAGCTGCCCTGTTTATGTTGGTTTACTGATATTGCTAAGGATATGCTCAAGTGTTACAGCAGAAAAATGAGAAACAATGATGTAGTCATCTAGCTGAAAATAGGGAAAATGAAAGGGAGTAAATCAGTATATTCTGGGGAAATTCTCAAGGAATTTTGGCCTTAAGTAACTGAAGTTTTGAATCTCTGTATAAATAAAAACTATATATAATGTAAGAGTAAACACAGAAAGCACAACCTTTTGAATGAGTGATCTCGTT EMBV3_06124 CATCCTGAGTGTACAGGACAACCCCCAAAGAATTACCTGGCCCCAAATATCAGAAGTGCC Gene BVT0102_242168 + 0 NULL GK000011.2:46232125-46296337 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41189 AGACCTTTTGTAGGGCTGATAAAGCCAAAATCTGCAAGGCAGGCCAGGAGACTGGAGACC Gene BVV0102_199737 - 1 EMBV3_01996 GK000026.2:3590998-4666726 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149908 TCONS_00149914 TCONS_00149907 TCONS_00149911 TCONS_00149912 TCONS_00149913 TCONS_00149905 TCONS_00149910 TCONS_00149906 TCONS_00149909 1 XLOC_091766 Coding TCONS_00149905 XLOC_091766 NonCoding Coding - 26:3774385-3777242 - TSS112432 267 0.441947565543071 2 0.907212885154062 1.17453736128428e-128 0.000408360962744256 0.00017245598417417 5.62151635256974e-09 0.000229862711152843 7.64326211051166e-11 6.78380975573536e-05 2.71240275256007e-104 5.91017779878743e-05 1.31424442733517e-05 1.21079961892139e-31 1.19063216891734e-44 0 3.14659169688741e-08 7.82464473620829e-28 0 0 0 0.00337047407199753 0.00254271144499114 0.00314244457668824 0 0 0 0.00114562561223143 0.000791521208538283 0.00186611171777798 9.88111219380273e-26 0 0 XR_249749.1 LOC101929505 PREDICTED: Homo sapiens uncharacterized LOC101929505 (LOC101929505), misc_RNA. 4e-11 71.6 76.77 0.363295880149813 0 noncoding 0 0 0 0 0.0520383605819285 0.667119373086058 0.0390673120964707 0.417967122338716 AAGAGGGAGGAGTCTTTTCTCTCTTCATTGCCCTTTGAATCAAGACTGCAGGTCGACTCTACCCTGGGTCTCCAGTCTCCTGGCCTGCCTTGCAGATTTTGGCTTTATCAGCCCTACAAAAGGTCTCATTTTCCCACTTGTTTAGCTCATCTTTTCTCACATTCAAACAGATGAAGATAGCAACTGTGCAGTCAGGATTTTGCCTCAGATCAAAACATATTCCACAAAACATCCTTGGACGTCTAGAAAAGAACAGTCATCTATATG TCONS_00149913 s 5' 0 TCONS_00149911 TCONS_00149913 s 3' 2591 EMBV3_02958 CTTCGCTAGTGTGTGAAATGAGTGCAATTGTGTGGTAGTTTGGACATTCTTTGGCATTGC Gene BVV0102_024435 + 0 NULL GK000015.2:3700945-4501434 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032256 TCONS_00179502 TCONS_00179848 TCONS_00198236 TCONS_00218478 TCONS_00031427 TCONS_00166465 TCONS_00099607 TCONS_00078762 TCONS_00189405 TCONS_00220928 TCONS_00073908 TCONS_00129900 TCONS_00030483 14 XLOC_018496 XLOC_109274 XLOC_109618 XLOC_119893 XLOC_131798 XLOC_017675 XLOC_101303 XLOC_059850 XLOC_047649 XLOC_115444 XLOC_134244 XLOC_045668 XLOC_078613 XLOC_016736 Coding TCONS_00198236 XLOC_119893 NonCoding NonCoding - 5:27996190-27996956 - TSS147804 766 1 TCONS_00198236_3 68 0.996083550913838 1 0 0 0 1.72584760715307e-06 0 0 0 0 0 0 4.88309551187742e-07 0 1.29666684177807e-06 0 0 0 0 0 0.00280061575022337 0 0 0 0 0 2.18859511357849e-05 4.52251257115394e-06 0 7.64901526782545e-07 0 0 0 NM_174654.2 SLCO1A2 Bos taurus solute carrier organic anion transporter family, member 1A2 (SLCO1A2), mRNA. 0.0 666 90.39 0.635770234986945 0 noncoding CTTTCTTGCTTTTTAGATGATCCAACAGATGTTGGCAATTTGATCTCTGGTTCCTCCACCTTTTCTAAAACCAGCTTGAACATCTGGAAGTTCATGGTTCGTGTACTATTGAAGCCTGGCTTGAAGAATTTTGAGCATTTCTTTGCTAGAGTGTGAGATGAGTGCAATTGTGTGGTAGTGTGAACATTCTTTGGCATTGCCTTTCTTTGGGATTGGGATGAAAACTGACCTTTTCCAGTCTTGTGGCCACTGCGGAGTTTTCCAAATTTGCTGGCATATTGAGTACAACACTTTCACAGCATCATCTTTTAGGATTTGAAATAACTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTCGTAGTGATGCTTCCTAAGACCCACTTGACTTCGCATTCCAGGATGTCTGGCTCTAGGTGAGTGATCACACCATTGTGATTATCTGGGTCATGAAGATTTTTTTGTATAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATATCTGTCCTTTATTGAGCCCATCTTTGCATGAAATGTTCCCTTGGTATCTCTAATTTTCTTGAAGAGATCTCTAGTCTTTCCCGTTCTATTGTTTTCCTCTATTTCTTTGCACTGATCACTGAGGAAGGCTTTCTTATCTCTCCTTGGAATTCTGCATTCAAATGGGTATATCTTTCCTTTTCTCCTTTGCTTTTAGCTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTCCTC TCONS_00194399 . 5' 3322 TCONS_00194399 . 5' 3322 EMBV3_03731 AGAACACAGACATGGTAAGCAAGAGCCCAGAATAGAAGTCAGGTTCCAGAATCAGTCCTG Gene GeneID:614615|THAP5:NM_001076339:7_cdna Constitutive 0 NULL GeneID:614615 4 GENE THAP5 NULL THAP domain containing 5 EMBV3_05797 CTCAGAGGTAGAAGAAGCTCAAGAAGCAAGGCCAGATGACTGAAGCCTGCCTTAACCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31426 TTGCCCGGAGCTCAGGTGACCGCGAACTAAGACACTTTTTGGAGAAGTCACTTCTAGGCG Gene GeneID:787167|LOC787167:XM_002684662:105_cdna Constitutive 0 NULL GeneID:787167 1 GENE LOC787167 NULL hypothetical LOC787167 EMBV3_35482 GACAACTTAGTCCATTTCCTCTTTAGGAGAAGTAAATTCCGCTTAGCTCTGCGCACTCCC Gene GeneID:618604|CBLN1:XM_002694774:566_cdna Constitutive 0 NULL GeneID:618604 18 GENE CBLN1 NULL cerebellin 1 precursor EMBV3_21901 CAGGAAGAGGAGGAAGCCCTGGAGGGGCTGGAGGTGATGGATGTTTTCCTCCGGTTCTCA Gene GeneID:100313389|MIR671:NR_030989:551_cdna Constitutive 0 NULL GeneID:100313389 4 GENE MIR671 bta-mir-671 microRNA mir-671 EMBV3_22317 CCTGGATTTCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCTGTGGAGACTCTGTTG Gene GeneID:614223|LOC614223:XM_002699927:65_cdna Constitutive 0 NULL GeneID:614223 X GENE LOC614223 NULL similar to dachshund 2 EMBV3_19960 GGCGAGCGAGGCGCTCAAAGTCAGCCTCGCAGACATTGCAGCAGAGCCCCGAACTCGGGA Gene GeneID:100296620|LOC100296620:XM_002684648:39_cdna Constitutive 0 NULL GeneID:100296620 1 GENE LOC100296620 NULL hypothetical protein LOC100296620 EMBV3_26648 CTCTTGTGCTACGTGTCTTTGGCTGTTGAGCAGACGTGGAGCAGACATCATGGATCAGGT Gene GeneID:615778|SEC61G:NM_001040586:223_cdna Constitutive 0 NULL GeneID:615778 22 GENE SEC61G MGC127036 Sec61 gamma subunit EMBV3_08066 CGATGGCAGTACCAACAGCGGCATCTTCCAGATCAACAGCCGAAAGTGGTGCAAAAACCT Gene GeneID:617955|SPACA3:NM_001105007:301_cdna Constitutive 0 NULL GeneID:617955 19 GENE SPACA3 NULL sperm acrosome associated 3 EMBV3_12919 TTGGCTACTCTGCATGGCTTTAGGGATCTCAGTTCCTTGGTCAGGGTTTCCAGGTAGTGA Gene BVV0102_214528 + 0 NULL GK000016.2:51821186-51841818 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05852 CTGGGGAAAAAAGCCACCCTCTCTTTGTCTGATGAAGTGTCCCCTGCACTAACTTGTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37717 CCTCAGAGATTCATGGGGCAGAGTAAAAAGAAATCAAGTGCTGGTCTATCATCCAAAGCC Gene BVV0102_050054 + 0 NULL GK000001.2:114431456-114592983 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06475 TCAGGCCAAGAGTTATGCAGTATTTCCCTCACAGATCCACGACTACCATACAGAGCAGCC Gene GeneID:514627|SPAG8:NM_001102005:47_cdna Constitutive 0 NULL GeneID:514627 8 GENE SPAG8 MGC157314 sperm associated antigen 8 EMBV3_43502 GAGATGAGCAGCAATGACTCCTCCCTTATGAGCACATCCAGGATGCCATCAGCAGCCTGG Variant GeneID:540604|TTC21A:XM_002696921:449_cdna 131^260 2 EMBV3_02507 GeneID:540604 22 GENE TTC21A NULL tetratricopeptide repeat domain 21A EMBV3_13192 GATCAGTGTTCCTTTTCCAGAGCCAGACTTTAAACTTCACAGAGGATGGCAGCACACACC Gene GeneID:787197|LOC787197:XM_002690579:268_cdna Constitutive 0 NULL GeneID:787197 10 GENE LOC787197 NULL similar to TCRA protein EMBV3_22345 CTTTGAGGTGCTGAGCTGGCTGGAGGGCTGCTGTCCTGCCTGTTGGCTATGGCATATGTG Variant GeneID:507473|C2H2orf24:NM_001015538:59_cdna 649^766 1 EMBV3_24642 GeneID:507473 2 GENE C2H2orf24 C2orf24 MGC137840 chromosome 2 open reading frame 24 ortholog EMBV3_21455 TTGTTGACACGCTTTGCGTCTGCACAGTTTCCCAGTTACCAGCCTCGCCCTTCGGGGAGT Variant GeneID:509797|TIMM17A:XM_002694116:448_cdna 598^643 4 EMBV3_07450 GeneID:509797 16 GENE TIMM17A NULL translocase of inner mitochondrial membrane 17 homolog A (yeast) EMBV3_09725 TGTCTGCCATCAAGGGCCTGACCATGGGGGGCCTGGAAGTGATCTCAATCACAGACAACA Gene GeneID:509816|MRPS11:NM_001035078:17_cdna Constitutive 3 NULL GeneID:509816 21 GENE MRPS11 MGC127419 mitochondrial ribosomal protein S11 EMBV3_10126 GAGAGGGGCTACGTGATTCTCCCCAATGACTACTTCGAGATAGTCGAAGTCCCAGCGTGA Gene GeneID:538615|THAP1:NM_001034648:94_cdna Constitutive 0 NULL GeneID:538615 27 GENE THAP1 MGC127346 THAP domain containing, apoptosis associated protein 1 EMBV3_20095 TCCAGCGCAGCCAGTACCCCAATGTATTCGCTCGGAAGGAGCTTGTGATTCCAATCGATG Gene GeneID:782892|LOC782892:XM_002699473:56_cdna Constitutive 0 NULL GeneID:782892 X GENE LOC782892 NULL similar to Rhox homeobox family, member 1 EMBV3_24242 GTATAATCATCTTGGAGTCCCAAACTGAAGGGCCCCATTAGAAGGCAGCATTTTCTGCTC Gene BVV0102_153897 + 1 EMBV3_15761 GK000004.2:72574869-72774521 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182023 TCONS_00182022 1 XLOC_110749 Coding TCONS_00182023 XLOC_110749 NonCoding Coding ADAM22 4:72758806-72765341 j TSS136109 2066 5 TCONS_00182023_5 43 3 0.684266911539639 8.24412758046487e-06 0.00077332970249364 0.000385209827399708 0.000377619462583953 0.000541176743889853 6.92556416163401e-05 0.000114131037554367 0.00044744718248319 6.11045491249032e-05 7.96607604330593e-06 4.20690466930892e-10 4.53984356208813e-06 0.000225148537564005 5.41284654054132e-05 7.53030982308277e-05 0.000111438253230463 0 0 0.000168589785991407 0.000198408358149469 1.02856264001257e-05 0 0.000536179071723525 0 4.35963326350824e-05 0.00026506103929001 5.16976522611307e-05 9.29832039171865e-06 0 1.05775999867288e-05 NM_001191131.1 ADAM22 Bos taurus ADAM metallopeptidase domain 22 (ADAM22), mRNA. 1e-67 262 100.00 0.0696999031945789 XM_005250444.1 ADAM22 PREDICTED: Homo sapiens ADAM metallopeptidase domain 22 (ADAM22), 0.0 1328 86.73 0.535818005808325 0 noncoding 0 0 0 0 -0.12847757271059 0.532873242597454 0.00933680139421758 0.856676460290794 CACCTTGTACCAGGAATTGAGGAGTCATGGATGTGTAGTGGACTTTATCTCCTGCCAAGTCTCCTTCTTCGTCAACTGGGTCTATTGCTTCCAGCAGAAAATACCCTTATCCAATGCCTCCCCTTCCTGATGAGGAGAAGAAAGTGAACCGACAAAGTGCCAGGCTATGGGAGACATCCATTTAAGATCAGCTGTTTACATGTGATACATCGAAACTGTTTACTTCAACTTTTATACAAACCCAGCCTCATGGAATCACTGCAAATCTATCTGCTCTTCAGACAATTCGAAAACATCTCTGAGAAGCCACAGAGGAGAGGAAGCCAAGCTTCACATCTGGATACCATTTTCTTTTTGTCATTGGCTTAGGATTTAACTGAACCATGAAAAGGACTACTGAAATGTTACACTATAACATGGAACAACAAAGGTCCTGGTATGTTAATGGATAATCCGCATGACAGATATATGTAGAACTATCACTAAAATTAACTCACATGACCCAAATGTAGCAAGTTACCAAGGGACTATAGTGGATTCAGAACTTGACATTCTGAAGCACATCCTCATTGTAGAAAGTCAGTAATGCTATGTGCATGAAGCTTCTGTTTCTTGTTTTCGACATTTAAGGAAACAACATCCCTAATAGAAACTAGCATGCAGGGCTAAGGCATATAGGATTTCTTCTGCAGGACTTTAAAGCTTGAGAGGCCGATATCCCATATGCTAACTGTAAACATGTATTTTTCTTTTTTCTTTTTTTACTTTTCATATTTATATCAGCATACAAGGACAATTGTACATATGTAAACATTTTAAAATTAAAAAAAAAAGCAGCTGTTACACACAAGTGTATTTTGCCAAATGCCTAAAAACAATCAGTCACAGTCACGTCATTGTCATCCATCAGCTGTTCTTTAAAGATTATAATCGGACGATGTTGTAAATACCGTGATCAGGGCTGTATGTGTGTCTCCCCTTAATTGATGTTTGTCCAAACCATGTGCTAGCCTTTTAAAGTGTGCACAGTCTGGAGGTAGTTTTATTGAACAAGAAAACAAAATGTCCAACCAAACTTAGGGCCTCCACAGCTTGCTTCCTGCCTCCAGGCGCTCTGCTGCCTGTTGGCTGGCCCCTGGGGATCCTCCAGCAGGTCCATCTTCTTTCTGGGGGCTACAGTGCCTGCCTCAGCAGCTGTTCTTTTTCGGTACCAGAGCACATCTGCTAGTCTCACCCCAGGGGGCCTGTGAGCCCCACAGCAGTGTGTCTTGCTGAGATCAAACAAGTGCACCAAAGACGCAGGAGACCACGGCTGCTGATGCGTTAGTAACTCCCACCTTGCCAATACTCCAGCCCTTTGTGGCCGAAACTTTTGTTCTTCAAAAAAACTTTTTAGCCACCCTTATCTGTGATGTGAATGACTTGTTTTAAAAAAACAACTTTTACACAGTTTATTAAGGGTATTTATCATCAGTGGGATGTGAGTCCCAACAAGTCATTCTGCACTGATTTGTAAATAAGACATGGACGGTTCTACGAGGTGGGCTGGGAAGCCTCAACAGGCCACAGAGGGTTCAAAGAAACCGAAAACCACAAAAGTGAGCAACTGTGAAGTTACCCAAACAGCTGGCACGGGGAAGAATCTGATGTCCTGAACTATTTTTTTTTTAATCCATAGAAAAGTGAGAAATCTATGTTAAATCCCCCTCTTTAAAACCAAAGTTCCATAGCTATCATCATGCGGCTCTATCATTCTTAAAGAAAACTTCTCTCCAGAGGCTAACTTAGTGAGCTCAGAAATGGATGGGATCAATCAAATGCTTCAATGGGAAGAGTACTTCTGAATTTCCTTATTTTCTTTCCTTTTTCTTGAGAGGAATGGAATCTGCAGACAAGATTTCAGAAATATCCTGTAAGTTTGATCTCTCCCAGTAGTGTCCGAGAACAAAACCCATTTCATCTCTTAAGTATAATCATCTTGGAGTCCCAAACTGAAGGGCCCCATTAGAAGGCAGCATTTTCTACTCTATCTGTTTATGTCTTCTATAATGGACCTCTCTTCTGAA EMBV3_11929 TATCTTTATAAAAACAAATCCCTCAGGAATGCTGACGCACCGCGTGGTGTCCAGCCAGGC Gene BVT0102_415918 + 0 NULL GK000012.2:78445753-78507682 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035729 TCONS_00035728 1 XLOC_020986 Coding TCONS_00035729 XLOC_020986 Coding Coding RAP2A 12:78506379-78549442 j TSS26149 5610 1 TCONS_00035729_3 231 3 0.869792392364498 0.000738890172291846 0.000462138270070955 0.000444948944891227 2.17407794973225e-05 2.11207339952256e-05 0.000308272862334838 5.31153126642417e-05 6.02227779550294e-05 0.000210879713695786 1.05525208404154e-09 6.25712703089942e-10 7.47554321401555e-10 5.28147357498224e-05 0.000414659867976128 0.000259100476124188 0.000452852997008176 4.21837162638767e-09 8.55386561532847e-06 0.000234903465891809 0.000945648486592127 6.13098697222289e-10 1.95975334981236e-09 2.23761102118175e-09 4.17505680126532e-09 0.000428760060408485 2.30214665422628e-05 0.000457586201468515 1.85649224444471e-09 1.13831158152015e-09 1.13508569485886e-09 XM_005213936.1 RAP2A PREDICTED: Bos taurus RAP2A, member of RAS oncogene family (RAP2A), 0.0 7164 98.75 0.726559714795009 NM_021033.6 RAP2A Homo sapiens RAP2A, member of RAS oncogene family (RAP2A), mRNA. 0.0 4053 82.13 0.728520499108734 TCONS_00035729_3 sp|Q80ZJ1|RAP2A_MOUSE RAP2A_MOUSE Ras-related protein Rap-2a; 5e-117 336 90.22 0.792207792207792 3 coding 0 0 0 0 -0.00953454433865695 0.948117333566986 0.0563747948752156 0.434180009931564 AATTGGCTGATGGATGGTATCACGTGGTATAAGGCGGCTCTCCATTGGCCGAGAGTGGCACCACGGGGTCCACAGAGGTGGGCTGGTTGGCTGAGATGGACCCCTAGCTTCCTACTAGGTTGTCCCGGCTGGCTGTTGCTATGAGGTGTCCCCGGGCTTTGCGGCTGTGGCTGAGGGCTCCGCTCTCCCGGTTTTCCAAGCGCCCGTGGTGACAGGGCGTGGGAAGAGCTCGACTTTCTCTCAGGCCAAGAAAAGGGCGGGGCTGGGGAAGGTGGGCGGGACCCCCGGCGACGTAACCGGGCGTGGGCCCCGGCTACCTCGGCCTCACTGCCTTGGGCAGTAAGCTCCCTGCGGCCTCTCGCGTCTCCCTGAGTGTCCTAAGGCGTAAAATAAAAGCTTCCTTTCGTGGTGTGCCTGCTCCTCCCTAAAACAAAGAGCCTTCTCGTTATCTTTATAAAAACAAATCCCTCAGGAATGCTGACGCACCGGGTGGTGTCCAGCCAGGCCCTCGTGCCATGGTCGCCGTTTGGGCCCTGCCGGTGTCTCTCTTCTCAGTCCCCTCCTCAGGTTAAATCTCGGAGACTGCTCTGGCCCCTCCAACATCCTGTCTCCACCAAAGTCTTGAACGTGGCGTGTTCAGGTAGAAACCCCTCCCGTCGCCGGGTGGAGAACTGCGCATGCTCATTCGTGACCGGCACCTTCATCGAGAAATACGACCCCACCATCGAGGACTTCTACCGCAAGGAGATCGAGGTGGACTCGTCGCCGTCGGTGCTGGAGATCCTGGACACGGCGGGCACCGAGCAGTTCGCGTCCATGCGGGACCTGTACATCAAGAACGGCCAGGGCTTCATCCTAGTCTACAGCCTCGTCAACCAGCAGAGCTTCCAGGACATCAAGCCCATGCGGGACCAGATCATCCGAGTAAAGCGGTATGAGAAAGTGCCGGTCATCTTGGTGGGGAACAAAGTAGACCTGGAAAGTGAGAGAGAGGTGTCCTCCAATGAAGGCCGGGCCCTCGCCGAGGAATGGGGCTGCCCTTTCATGGAGACATCGGCCAAGAGTAAAACCATGGTGGACGAACTCTTCGCCGAAATCGTGAGGCAGATGAACTATGCCGCACAGCCCGACAAGGACGACCCGTGCTGTTCCGCGTGTAACATACAATAGCACTGACATGTGGCTGCCCGCCCCCCACCATTGGAGGCGACACCAGCCTCTCCTGCTCGACCATGGAGCCTGCAGGGTGTGCGGTGTGAACCTCCAGGGAAGCAGCAGATTGTCCTTCAGAGCCAAGCGGCGATTGTCAGCTGATATCTCTGAGTCACCTTTGGGTCCAGTTACTGCAGTCTTCACCATCGTCCTCAGTCCCCTCCAGGCACCTGCAACTTCAGGCGTCGTGGCCCAGTTGATCCACAGGGCGACCTCCTTCGAAAGCTATGATGGCATTGTCACTTGAGTTGACAGAAGCAACTATGGTCAACGTTAAAAGTAATCACGGGACAGAAACCGGAAGAATTCCTGTGACCGCTTAACCATTAAAATATTTTGTCTTCTTTAAAAAAAATAGATGAGTCAAGGAGAAATATTTTCCTACCAGAGTACTGAATTTCAGGAACTGAGATAGTGCTTCTAACCAATGTATCACATCAAGGAAGTAATAGCAGCTGACCTGCCGACAGCATTCCAGGGAGAGATTCTTTGCTCAGCTGACACACTTCTGTTTTTCAAAGTTGATGCTTAATTGTAGATGTTATCCTAATTTGTGACACAGAACTAACTCACGCACCAGTCTCTGATAGAGCCAGAGTCAGCACAGGTTGGGTGAAAATACAGCCTGATGTTAGAATGTCATCACCTGCTTTGCCCAGAAAGTGGAGACTCTCACAAGGGTTTGAGTCAAATTAAAACCCCAGACCCACCCCTCTGTTCACCAAGCAGGGATGGTCTTTGTTACTTTACTGAACAAGAAGGAAGCAACTGTGATGGAAAAAGATTGCCTAGCCTTACTAACGAGAAGCATTCCAGTAGATGAACTAGTACCATCGTGTAAGGAAAATGAAGCCATGTTGCATCCACATGTTCCCGTTTGCAGAAACCTCGCAGGACAGTACCGATATCTTGCATTTTTATGTTCGTTAAAGCAGCAAATTCCTTCTTGCCTTTAAGGGCTATGGTTGTGGTGTGATTCTTGGCTAACCTGCTTTCAAAATCAAGTTTTCTATAGCAGAGCTTTATTGCAGGCATTAAAAAAAAATTTGAATAACCATGTGAAATAATTGGGGCTTAAAAGTAGAACAGAAATTATAGAGTGGAAAGTAAGAGACAAAAAAAAACCCTTTAATTTTCCTGGAAAATTCTATGAAGATTTTCTTACAACAATTTTGGCCTGATTACTGAAGTGGCAAATAAAGCTAGAGTGAATATTTTGTCTTGAAAAGGTGCTCAAGCCCTGACATTTTTGGTTTTTATAGCCGCCAAGTATTTATCATTTGCATGACTAATGGCACAGGAAAAACGTATTCATAAGTTTTACAATCAAGCGCAGAAGGGTTTTCAACCACCTTCAGAGTTATAAAATGCCGAAGAGAGTGTTTTGAGCTGATCCTCTGGAGATGAATTTGGCCTTCAGAACTGCAGTATCACTGAGCCTGTGATCTGCATACCGCCTCAAATTTCTTGTCGGTTTCACACTCTTGTGCAAGTCACCTTGGGTCTTACGTGTGTTACTGAGTGAGAATGTGTGTTTGCGTGTGCACGTGCGTTAATGTTCTGAAGAATTTGGCACAAGTCAGAGATAGTTGCCTATACTGAGAATCTGTCCTGCAGAATACCATGGAGCAAAAACATTTTTTTTGTCTTTTTTTTTTTTTTTTTAATACATTCTTGAAATCATTGCTAGCCCTCCCCCCAAGTGTTTAGTAAACTGATGTTAATGTTGGAGGAGAGAAAAAAGGTGGATAGTACTTTTCATAAATGAGAAGACAGATGTGTGGGTCAAACCAGGCATGGTTGTCAAAAGTCTTTGAATTGTGAATATTTGCATTCTTCAATATAATTTTTTGAATAATTTCCAATTATGAAGCACCTTTTATAGGCCAGAAAGTTCTAACCAGTTTTACTGCATCAAATTTGGTCATGTAAAAGGTGATTTGACTCAATCATGTAGACAAGTCAGTGATTCAAGAAGTATGATTTTTATCAACTGAAAGAGAAATATTTGTTAGTGCACTGTTTGAGTTTTGAAGCCTCTGACTTCTCAGAATGATTCTGGTTTTTAGAATTCCATATTTAGTAGAAATTTATGGCAAGTAAGATTACATATAAAAAATCTATAAAGACTTTACGGTTTTACATTGTGGATTGCTATGCAGACAAAAATAAGTTAAATAATGTGAAAGGTATGGCAGGATATAAGGTGGAAACGATTATCTAAATATTTGGGTTTTAGTTAGATGTGTTTATGTCAGACAATAAGGTGGTTGTTTTTATTTTTACTGTAAAGATGTTAATAACTGATATGGCTGCCTGATCAGTGTTTCCACCCAGCCCTGCGTATTTAGTGACAAAGCATCAAATATATCCAGAAACTTGGAAACCCTCGTGTGCTCTTACTGTTGGTGTTTCATCTGGTATGAAAATAACTCAGCTTGAATGAATGTGTTTGTTGAGATGTTAATACAGAGCTTAAGAACAGGAAGATGAAATTTGTTGGCACATGATTAATAGTTGGTGACCTTGTGTCGCTATTTATTTTATGCCCTGATCAGAATAGCAACTAGATAAGTGAAAGTTTTTCTAACATGCCTTAAAAATGTTATGGTTTGATCCAAAGACCCACTTTTTCTTTAGCTACTACGATAAGGTTTTCTTCTTTTTTTTTTCCTTTGTTTTGTCTTGTTTTACTTTTATACAAAAGCAGCATTTTTTTTTTGTAAGATTTTTTGTTCTGTGTCGCAACTTTTTTGTTGTTTTTTGGTTCTCTTAAGCTGTGATAGTGATGGTAACTGATGCCTTTCTTTTTGTTCAACTCATACAAAACAAGCCAGCATCTGATCAAAAGTATTACATAAAATCTTCCTTAAACTATGGAAAGGTGCTTTGATGATTTTTCTTCTTTGGTTTGTAGAATTAGGACTGAACTTTTGACTCTAATCACTACAGTTGCCATCACTTTTCTGTGGTCAAACTACTGATATTTGCTTTTCTATATAAAGAAATGTTGCCTGAGGATGTCTGCTGCTTGTTTTCAGGAGTCGTCCAGTAGGAATATTGTCTATGTGTATGAATATGAAAGTGCTTATTTCGCTTGTTGCCATTGGGTTTTTGTTTGTTTGTTTTGTGGTTTTTTGTTCTTCTCGGTAGTCCTGTGTTAGCACTTGGGTAAGCTTTAATGGTCTCCTTAGCCAATCCAATGTTAAAGACTATGGGGTCTTTTTTTTTTTTTTGATTAACGTGTCTGTCATTGTGCATCTCTTAAATCTTGATCAGGGTTTCAAGAATGACTGCAGTGGGTTTTGGAAACAGACTTATCCTTATTGATTTGGGGTTTCCCAGAGATAAATATAGTTCACAGTTAATTGTTGAGCTCTAATACAACTGACCATTTAAAATTGAACAACAGTTTATTGTTTTGTAACAGTGTCAGTTGTTAAACCTTGACCTTTCAGTTAAAACATGAATTGTAGTTATAACTCAATGCAAATTCAACAGTTGTATTTGGAGTTAAATTATTTTAACAAATAAATTTATTTAATGAAATTGCCTCTGGATTTTTTCTTGTTGTTTTATATGTATTCATGGGTGAAATGTATTTTTTCAAAAACTAAAAATTGCTGTAGAATTCTGTTTACAGAAATGGTCAAGCTGAGAATTCATCATATTAAAAAGGTTAGTAGATCATTTTCATAGCTTTTAAAAATAAAAACATGAGAAAGATTTTTAAATTAGTAAGTTTAGATATGAACAGTACTTTATATTTTTGATGATAGCTGGCTAATTTGAAATCTCAACGGTATTCACGTTCACAGAATTGTTCTAGATAATTAACATTAATTAGCAGTTGCTTTGTGGCCCTGCTGGTATCACAGAAATGTATCTGTGTCCTTCCACTGATGGCTTGGGGGTGTCTCTTTGTTTAGGTCTTGTGGATTTTTAAGGTACCAGAGGCTGGAGGTTGCTGTTTAGTAAGGGCTGTAGGGCCTGCTTGTTCTATATAGGGCCCTGTGAATGTTGACAGATGCTGTTAATTATATACAGCCTTCAGCTGCTCTGATAAGGAGCCCATTCATTCCCTAAGCCAATTTAAACTGTGCCTTTTGGTCATGTTGCCTTCAAACTGTGTTGAAATTTCCTGGCAACATTCCACCAGTTTAGAAGCCTCATTGTTTTGGAATAGAATAATTTGAATGAATATAACAGAGGCACTGTAGGCAGAATCTCAAATATTTAAAGGAAAATGTGTCTATATTTTAGTATAATAAACAAGTATCTACTGGTTGGCCTCATAATCTCATTTGAAGCCTTTGTAAAGTATTCAAGCCTATCACATTCTGCTTCCAATTGGGAGAATTTCTTTGTGAGTGGAAAATAAAATTTTGAAATTCTAAC EMBV3_01139 CTATGCATCGCAGGCTTGTGCAGATACCACTGAAAAGGGGCAGCCAGACAAAAAGATGCG Gene GeneID:521742|FOXN2:XM_002691316:449_cdna Constitutive 0 NULL GeneID:521742 11 GENE FOXN2 NULL forkhead box N2 EMBV3_11077 GCAAAGTACTCCCTTGAAGTTACTCCTGCCTAAGAGGGTTTCAGGTTTGGTCTTTTTGTC Gene BVV0102_170309 + 0 NULL GK000011.2:9791268-9899416 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023980 1 XLOC_014407 NonCoding TCONS_00023980 XLOC_014407 NonCoding NonCoding - 11:9847533-9853857 - TSS17712 3640 4 TCONS_00023980_3 89 0.345604395604396 4 0.424956507986715 0 0 0 0 0 0 0 0 0 0.000121909583148246 0.000241044174689507 7.39007286393658e-10 0 0 0 4.69775378661784e-05 0 0.000206416274685569 0 0 0 0.000120378761047763 5.95431129548017e-05 2.68511882887642e-07 0 0 0 0.000254709590069249 0.000198539517333224 0.00023275153065087 XR_227015.1 LOC101904209 PREDICTED: Bos taurus uncharacterized LOC101904209 (LOC101904209), 0.0 1353 100.00 0.205769230769231 NM_004412.5 TRDMT1 Homo sapiens tRNA aspartic acid methyltransferase 1 (TRDMT1), mRNA. 1e-18 100 75.31 0.0423076923076923 0 noncoding 0 0 0 0 -0.0145362497855577 0.929827053842955 0.0409367779808448 0.413893191840727 AGCATCATTACCAGACATGGCCAGTGACTGTCTTTCTCAGCATTTCCACCATCCACCCTTTTGCACCTACACATGGCGTGGTTGTTTGTGCCACTTCTGGGCTGAAATGATTGAGAAGCAGCCCCATCTTCAACTTGTTTTTCCCCATCTGCTGACGGGGAGGAGAGCCAGAAAGTGTATGGAGCCCAAGTCTCTGAGTCACCCTTTGGAGGAAAGCTGCCTACCCTTTAGGAATACCTGTTTGGACTCTACTTAAGCAGAAATACACTCATGACGTTTGTCACCCTCGCTTGAAGGTATGCAAATCACCCATTCATCTAGATATAATGGTACTCTGGCAGGAGAGTTTGGAAATCACCAAGAGATCCTGGAGTTCAAGCTCTGGTATGCCAGTTGGTGAGTGAAGGTCATCATTCCTGAGGCAAAGTACTCCCTTGAAGTTACTCCTGCCTAAGAGGGTTTCAGGTTTGGTCTTTTTGTCTTGTACCAAAAGATACTACATAATGAGGTAGGTGGAATCACTGCCATAAAAGCCTGGGACTAATCAAATAACATACTCTTAGTGTATATACTCTCTGCAGTTTTCTGAGTATCTTTGATATTTATCTCTTTGACTCACAGTCCTGATGTGATTGCTCTCAAGGTGTCCTGTCTTAAGTATATTAACAGATTCTCCAAATGATTTGAATTTATGTTTATCTTAAGACAGATTCCCAGGGCCCACCCCCAGACATATTTAATACGAATTCCTAGAGCCTTGAAATAAGCATTTCTTCATAAAGATTCTTGGAGGGATCTGGTATCACACTCCAGAATCATTGCTCTACTCCAGTCCTCTCATTTTCCAAATGAGCAAACAGCCAGGGAGGGTGGAAAAGTTAAGACATTGTCACACTGTGCCAGGATTAGGGCCAGAATACAGGCCTCCCGACTCCAATTCCAGTGTTCTCTCAACTATAGTGCTCTGCCCCAGAGGCTCCCAGACCCTTGTGCTTGGCTTCTGGGAAGCTGTGCAAGGCTTAATCACAGCAATCCTGCTCTGCCTGGCCTTGTTCCCAAACGCCGTGCAGCCTGTGGGGGCAGGGAGAGGGGCGGGCAGTGGGTGTGATGTAATGTGATCAGCTCTGAGGGGTTTCTCCAAACTCTGTGGCAGAGCTGTAAACCTGGAGCGAGCCACCATCCCACTGGGCTGCTGGGAGCACTGCCCCGGTCCCCGCCCCCGCCCCACAGCTGTTTTCCTACCCAGGCTGTGTTCAACCTCTCCCCAAGGCCTCTTGCCAACAACCCCTCCTCAACTTTGTTGCTTCCCAGAGATGAGAAAAAGGAGGAGAGACAGCTGTGCAAGTATCTCTTTGGAATAAAGGGTTTCGAAGAAAGGAACCTAGAGGTGCTGGAAAGGAAAGGCTGCCAGGGCCGTTTCCGTGGCAACGCCTCCATTGTGCCCTAGCAGCTACGTGCTGCCTGGCACGTGCACTTTGCCGGCCCCTGGAGGGCACTGCTGTCTCTCGCTCGCTCACGGTTTGGCAGTGAGTTTCTAATACTGGTATTCTAAAGGTATTTGTGGGCCCTTGAACCATCCGGAGCTGGACGCACGTGTCTGCAGGCCATCTCGGTAGTGTCCAGGACGTGGGCACCTCTCCCTTTCTACTCCTGCCACGGAGCTGGCATGTAGCAGCTGCTTAAAAACTGTTGAATGAAGGGTGAACAAATCAGTTTCTCTGAGTCTAAGCTCTTCTGCTTATAGAAGTGAGAGAAAACCAAAGGCTGGAGGAGAGGAAGCTTGGCCCTCTCCAATTATAGAAGACACATTTTGGTCTCCAGATCAGCCCTAAGGACCTCCCCGCTTCACTTCTCACAAATCGAGTGCCTGTTGACCCCTATGAGCTGCAACCCACCAATACTGAAGAAAATAGAGACCTTGAGGCTGGAGCTCCTTCAACCCCACTCCGTGCACCCAGTTTCATCTTTTTAAGTACCAGTCCTTCCCTGTCTCACTTGGCCCAGGGAAGGAGGTGTGTCTGCTCCTGCCCAAAGCTAAGGCCTCCTGCCTGATCTTAATTTCACTCCTCCAATAACGGGCTCCCGGAGACTTTTCCTGTTGATTGGTGTTATTCCTGCATCACATGAACATGCCGCCGTCTTCCCAGTTGTTTAAAAACGATGGGCAAAGACAGACGCCTGACCCTTTGTCATTTCTAAATGCTGTTGTATATTGCACTTTCCCTCCTCAGTGAAGTTTTATTTAAAGAAAAAAAAAGTTAGGGGCCTCCCTGGTGGCTCAGTGTTAAAGAATCTGCCTGCCCATGCAAGAGATGTGGGTTTGATCCATGGTCTGGGAAGATCCCACATGCTGGGGAGCAACGAAGTCCGTGTGCCACAACTATTGAGCCTGTGCCCTAGAGACCAGGAGCTGCGACTACTGAGGCCGCGTGCCACAGCTGCAGAAGCCCGCACGCCCTGGAGCCTGAGCTCCGCAGCAAGAGAAGCCACGCAATGGGAGGCCGCATGCTGCAACTGGAGAGTGGCCTCCACTCGCTGCAACTAGAGAAAAGCCCTCACAGCAACAAAGATCCACCACAGCCAAAAACAATAAATAATTAAATTTTTTAAAAATTTTAAAGAAAAAAGGTTAAATATTTATAAGCATTTTTTTAAATCAATATTTTTTTAAAGTACAAAATGTCTTCTTTATATCCCAGTCTTCTTCCCAGAAGCTATTTTTTTTTTAAACCATTTCCTTACAAGCATAGATTTACATCTATCTTTACCTTTTTTCTTGCTGTTTTCACATGACAATCATTCTGTAATAGTATGTATAGAGCTGCCTTATTTTTCCTAACATCCCACGGAGTACTTCAAAGTACACAAAACAGACGTCTCAACATTTATTTGACATGTCTTCCATCGCTAGATGTTTGGATCTGTCTTTTGCTATTTCAAACAATATTGCAGTTTTATTTATGTTATTTTGAATATGAATGTTTCTATAGCATAAATTCCTAGAAGTGAAATTATGGGATCAAATTGTATGCACATTGGGGATTTCAATAGATGTTGCCAAATAAGCCCACTCTAGAAAATATACCAATTTACACTCCCACCAAGGAGTATTCCCGGCAAGGAATAAGAATGACTGTTTCCTAAGGTCCTTACCAACAAACGAGCTGTCCAACATTTTTTTACCTTTCTCAGTCTAAGTGAAAATGATATTTCAGTGTAGGTTTAATTTTATTTTCTCTTACAATTAGTGAAAATAATCTTTTTTTTCCGTGTGTTTAAGAATATTTTCTATTTCCTTTTCTGTAAACTTCTGTTCATCTCTTTTACCAGTTTTTACATTGGGTTGCTCTTATTGGTTTGTGGAAGTTCTTTGTAAGTCCCTTTTGAGCATGAGTTACCTTATTTTTTCCAATTTGTTGTTTGTAGCTTGACTGTGCCTATGAGGTTTTGTAATGCAATTTTTATTGTGGAAATGTATATACAACATGCAGTTTGTCATTTTAACTACGTTTAAGTGTACAATTCAATGGCATTAGATACATTCATGTTGTGCGACCATCGTCACCATCCATCTCCAAAACTTCGCATCTCCCCAACCTGAAGCTCCACGTCCATTAAACAGTAACTCCCCTCTACTCAC TCONS_00026847 r 5' 55811 TCONS_00026847 r 5' 55811 EMBV3_28617 TGGGTTTAGGCTTGCTTATGTCGGTTACCAAGGCATTTGAGCCACCTCAGTCTAATGGCC Gene GeneID:538700|BOLA-DRB2:XM_002697316:26_cdna Constitutive 0 NULL GeneID:538700 23 GENE BOLA-DRB2 NULL histocompatibility complex, class II, DR beta 2 EMBV3_01456 ACATGACAGATACTGGGACTGTGGAGCCCCTGCAAACAATAGAAGTAGAAACCCAAGGCG Gene GeneID:613795|ZBTB8OS:NM_001076288:172_cdna Constitutive 3 NULL GeneID:613795 2 GENE ZBTB8OS NULL zinc finger and BTB domain containing 8 opposite strand EMBV3_34747 GCAGCGCAGCTGGAAGCGGCGGAGCGGAAGCAAGGATCAGTTCCCAGAGGTCTACGTCCC Variant GeneID:513152|RHOC:NM_001046138:98_cdna 51^129 4 EMBV3_19566 GeneID:513152 3 GENE RHOC MGC140228 ras homolog gene family, member C EMBV3_04700 ATTGAAGAAGAATGTGGCATCACAATTGTCCTCAGACCATGACCGACTTCATACCTTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21612 TGGGCAAGGTTTTGCATTCCAGACTTCAGTAGGGGCTCTTCACTAATTTTCCCAGTCTTG Gene GeneID:512336|HFE2:XM_002686082:13_cdna Constitutive 1 NULL GeneID:512336 3 GENE HFE2 NULL hemochromatosis type 2 (juvenile) EMBV3_35662 AAATCTCCAGAACTCCACAGTGAAAGCTGATGTCCGGGAACTTGTGACCCCAGAGGGGCA Gene GeneID:510214|ADAMTS14:XM_002698869:469_cdna Constitutive 0 NULL GeneID:510214 28 GENE ADAMTS14 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 14 EMBV3_05357 GGGCATTATCTCCGATGGCAACTCCTATGGTATTCCTGATGATCTGCTTTACTCGTTCCC Gene GeneID:535182|MDH1:NM_001034628:116_cdna Constitutive 1 NULL GeneID:535182 11 GENE MDH1 MGC127061 malate dehydrogenase 1, NAD (soluble) EMBV3_17040 GAATTCCGGTTCTGGATATGGCAGACTGTGATTTATCTGGGTACAGCAATCCACCCCCTT Gene GeneID:785676|TAS2R60:XM_002687121:466_cdna Constitutive 0 NULL GeneID:785676 4 GENE TAS2R60 Bota-T2R56 taste receptor, type 2, member 60 EMBV3_35617 CCTCATAAGGTCGTTGTGAGAAACACATGAGAGCCTTAGTGTGTGAGAAAGTATGGGAAA Gene GeneID:787344|ATG10:NM_001083531:14_cdna Constitutive 3 NULL GeneID:787344 7 GENE ATG10 MGC138057 ATG10 autophagy related 10 homolog (S. cerevisiae) EMBV3_07545 GACACTTCAACTATCCATACTCGGAGACGCAATCTGTTCCCGGAGGAGCATCTATGGACG Gene GeneID:534067|USP34:XM_002691422:416_cdna UTR3_Alt 2 NULL GeneID:534067 11 GENE USP34 NULL ubiquitin specific peptidase 34 EMBV3_08337 ATACTCTACATACATGTCTCCCAGGGTCTGCGTCATCTTACTGATTGCTTCCTACCTGGG Gene GeneID:782865|LOC782865:XM_002693121:541_cdna Constitutive 0 NULL GeneID:782865 15 GENE LOC782865 NULL similar to olfactory receptor Olfr467 EMBV3_27616 GATAGCTAACACCTACCTGCTAATCCCCCCTGTCATGAACCCCGTCATCTACAGTGTGAA Gene GeneID:784976|LOC784976:XM_002693382:7_cdna Constitutive 0 NULL GeneID:784976 15 GENE LOC784976 NULL similar to olfactory receptor 560 (predicted) EMBV3_34835 CTTCATCCTCCTGGGGTAGCATCTTCTCTGAGTTTGTGACTTGAAAGCGCTAGACCTGAG Gene GeneID:513412|JAM3:NM_001105364:2_cdna UTR3_Alt 2 NULL GeneID:513412 29 GENE JAM3 MGC140154 junctional adhesion molecule 3 EMBV3_09497 TTCTTCCCTTCATCCTCTGACCCTGACAACAGAGACAAGATTGGGGCGGTGCTGTTCACT Gene GeneID:615941|LOC615941:XM_002693786:79_cdna Constitutive 0 NULL GeneID:615941 15 GENE LOC615941 NULL similar to olfactory receptor, family 1, subfamily S, member 1 EMBV3_24030 GGTGCTAACAGCGGAGAATCCATCTTGTCCAGAAGAAATCAAAATCCTTTGTGCTCCCTG Gene BVT0102_149941 + 0 NULL GK000018.2:10175456-10250179 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08730 GTTGCGGGTCACAAAATCGTGCAAGGCTGTCAAGTAATCATTGTGCCCTACGCACTGCAT Gene GeneID:510156|CYP4V2:NM_001034373:31_cdna UTR3_Alt 2 NULL GeneID:510156 27 GENE CYP4V2 MGC127339 cytochrome P450, family 4, subfamily V, polypeptide 2 EMBV3_02943 CTGTTAACTGGAACCTCATGTGTAAGCACCTCTTCGGCTTCGTCGCCTTCATGCTGTTCA Gene GeneID:100298410|LOC100298410:XM_002700169:93_cdna Constitutive 0 NULL GeneID:100298410 X GENE LOC100298410 NULL similar to NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa EMBV3_01526 TGTGCTGAGCAAGGACCAGGCAAAGTCAGGCCTCAGGTTGTTGACTTTAAATGACTTTTG Gene GeneID:616675|NOP10:NM_001114521:103_cdna UTR3_Alt 1 NULL GeneID:616675 10 GENE NOP10 MGC127529 NOLA3 NOP10 ribonucleoprotein homolog (yeast) EMBV3_19060 CTGCTGCTCGGCTTCAACCTGCTCTTCTGGGGCTCTATGTGCTGGTTGGAGCAGGGGCCC Variant GeneID:539001|TSPAN2:NM_001034657:68_cdna 86^188 1 EMBV3_25705 GeneID:539001 3 GENE TSPAN2 NULL tetraspanin 2 EMBV3_33702 AGAGAAATGCCAATCAAAACTACCATAAGGTACCACCTCACATCAGTCAGAGTGGCCATC Gene BVV0102_118102 + 0 NULL GK000030.2:38796284-38815309 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10620 CTGGAGGATGGGGAGGTGTCTAAAGAACAGTGAAGAATGAAAATCTGGAAAACTTGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35139 CTCTCAATTAGCAAGAGAAAATCTGCACTATGGCTGATTTATTAACCGGCAATTCAGCCA Gene GeneID:515648|MGC127492:NM_001034503:83_cdna Constitutive 2 NULL GeneID:515648 15 GENE MGC127492 NULL similar to Protein C11orf33 precursor EMBV3_20857 GATGCTGGCAGGGTGTGAGACAGTGAAGCCAGAGGTTTTGGGAGTTTGCAGGTCATGTAT Gene BVV0101_015097 + 0 NULL GK000018.2:35752060-35763842 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082978 TCONS_00082979 TCONS_00082977 1 XLOC_051155 Coding TCONS_00082977 XLOC_051155 Coding Coding PLA2G15 18:35747166-35762694 j TSS62477 4335 2 TCONS_00082977_2 239 0.0987312572087659 6 0.721195337154634 4.5204795327453e-09 0.000184546862147586 0.000253321853064289 4.12389053355966e-05 3.01042853525755e-11 1.63270199231071e-11 8.20999174479256e-07 0.000177355866159472 2.88373725125703e-05 0.00136228122570667 7.47845813032877e-05 2.07421965325531e-06 1.132800719651e-29 9.65628744735417e-05 1.1431928542596e-09 0.0301488313295814 0.000886226559712155 0.0177365572355406 0.000260249950243084 0.000566768531038495 0.000152658409070748 0.00566554924918836 0.00528360489422745 0.00616280538845951 1.157686682086e-05 0.000582539695014452 0.000454385955802693 0.000937456639890655 0.000606638631218851 0.00343385277215988 NM_174560.2 PLA2G15 Bos taurus phospholipase A2, group XV (PLA2G15), mRNA. 0.0 3591 99.85 0.460899653979239 XM_005255886.1 PLA2G15 PREDICTED: Homo sapiens phospholipase A2, group XV (PLA2G15), 0.0 1750 75.63 0.565397923875433 TCONS_00082977_3 sp|Q8WMP9|PAG15_BOVIN PAG15_BOVIN Group XV phospholipase A2; 4e-150 428 100.00 0.944444444444444 1 coding 0 0 0 0 0.120012217253693 0.349204837438882 0.0227350287810048 0.674768970480839 GCCCTGATTGGCCCGGCTGCTGTGAAGGCTGCGAGCGGCGGGGTTAAGAACGTCGCTGCCAGCCGGGCCTAGGCACGAGACCCGAGAGCTGAGTCCGCCCCTCTGACTAGGAGCTGCGGTCCCTGCCATGGGTTGCCTCTGCCTCTACCGCTCCACCCTGCTCACGGGTGGCCTCTTGTTCCTCCTGATGCTCGCAGATCCGGCGTTCCCGGCTGGAAGTCGGCCACCGGTGGTGCTGGTGCCCGGTGACATGGGCAACCAGCTGGAGGCAAAGCTGGACAAGCCGTCCGTCGTGCACTACGTCTGCTCCAAGAGGACGGATCACTACTTCACACTGTGGCTGAACCTGGAGCTGCTGCTGCCCGTCATCATTGACTGTTGGATCGACAATGTCCGGCTGATCTACAATCAAACGTCCCACACCACCCAGTTTCCCGAAGGTGTGGATGTGCGTGTCCCTGGCTTTGGGGACACCTTCTCAATGGAGTTCCTGGACCCCAGCAAAAGCAGCGTGGGTTCCTATTTACATACCATGGTGGAAAGCCTTGTGAGCTGGGGCTACGAACGAGGCAAGGATGTCCGGGGGGCCCCCTACGACTGGCGCCGAGCTCCAACATCAGCCACAGGACTGGAAGGACAAGTACATCCGTGCTTTCGTAGCACTGGGTCCGCCCTGGGGGGGCGTGCCCAAGACCCTGCGTGTCCTGGCCTCAGGAGACAACAACCGGATCCCGGTCATCAGGTCCCTGAAGATCCGGGCACAGCAGCGGTCTGCCGTCTCCACCACTTGGCTGCTGCCCTACAGCTATACCTGGTCACCGCAGAAAGTCTTCGTGCGCACACCTAAGGCCAACTACACGCTGCAGGACTACCGCCAGTTCTTCCAGGACATCGGCTTCAAAGACGGCTGGTCCATGCGGCAGGACACGGAGGGGCTGGTTGAGGCCACAGTGCCGCCTGGCGTGCGACTGCACTGCCTCTATGGCACGGGGGTCCCCACGCCAGAGTCCTTTGACTACGAGAGCTTCCCAGACCGTGACCCAAAAATCCACTATGGCACCGGTGATGGCACTGTGAACTTGCAGAGTGCCCTGCACTGCCATACCTGGCGTGGCCTCCAGAAGCAAGAAGTGTCATTGCAGGCGCTTCCAGGCAATGAGCACATCGCTATGCTGGCCAACACCACTACCCTGGCCTACCTGAAACGTGTGCTTCTTGGACCCTGATGCCCGTGACGGACAGGGCCATGGGGTGACCCAGCCGCCGCTGCTGATTCTAGCTTCTTCTACCATGGCCCACAAGTTTAGCGGTTTGTGACTGATCATCTAAACTCCTTGATCTTGGGTTGTGAAATGGGGAAATGGTGTTTTTTTATCCTTCCTCTCTGGAATCGAGGAAGACATAGTCTGGACTTACTTGAGGGACCCTTGATGGCAAGAGTGCTACTGCTGGTGGAACTGTGACCTCAGGATAGCTCCATAGGGGGACTGACTGGCACCTGGCCCCACTCGCTAGTGCTGGGACCGTGTGTTCTTCCTACCCCCGTGGCCTTTTCACACTCGCCCACCAGGCCCTGGCTCCTCAGCCTTCTGATGAGGGATCTTACTGGCCTGTGGTCCCTAGGATGGGCTCCATGTCCCTAGGGTGCACCTTCTCACACACTGGCCACAGGTTGGCCTGCTACTAGCCATGAGTGGCTGGAGCTGCTGGATTGCCTGTGGCCTAACTGCTTGCTCACTCCAACTGTGGCTTTCTGGGAGCTGCCCAGTTCCCCCTGCAGGCAGGGGTGGGTTGTTGTCTTCTCCATGTGTTCCCAGTGTTCCCTGAGTGTTCCCAGGGCCTGGGGCATTAACTCCTACCTCTCTTACCTCTAAGAATAGCCTAGCTTAGGGCTGGGGACTGGGTCCCAGGAGCCCTGATCTCCATGGTTGGGCTGTGCACACAGTATTGATGCTATCTCCCTTCACCCTGGGGCTGTGGGTCAAGGATGAGAGCGGGCCTGGTGCCTTGCCCTTTAGGTACTCACGAAGAAACAGAACTCAAGGAAACAGCCAAGGCCAATCAGAGCCGCCCAGAGCTGCCCTCTTGCTAACCTGCCACATAGCTAGCTGCCCTGCCCTAGGGTCTCTGTAGCACCCACATAGGCTGGCACAGGACTGAGAGGAGGTGGGACTCTTGCCCATTCTGCCCAGCACCTATCTCCAGCAGGTAGCTCAGTGGTGTTTAGTCAGCAGGGACGAGCCCAGAAACTTGAGTGGGCCCCTGAGAGAGCCAGGTGCCTTGAGGGACCCCTGGGGGTTTTCTTCCTGCTCCAGAGGCACTGCATGACTCTCCCTGTGACAGGAGGGATGGAGGATCAGGATCTGCCTTGGTGGTCTCCAAGTGGGTGACGGCCAAGACTTTGGTCTGGCCTCTAGGGTGGGGCCCTAAAGCCACAGTCAGACTGGACTGTGCTTCGCTCCTACAAGGTTTCTGTGAAGTGGGATTTTCTCTGTCACATTCATGCCCAGCATCAGTTTTTCCCTTTGTTCCTGAGTGGGGGGCCCCATATGGGAGTCTGAGCAGGCTGTACCTCGATTCTGGCAATAAAAGTATTCTGGATGCTGTAAAATGCCCTGGCCTAGCCTCTGCTCTGAGCATGAGAGGAGGGAGGTAGTGGAAGGTGAGGGGGCTAGAGAGGCAGGTAATCAGGGGGTTAGACCCTGACCTTTTGTGGAGCCTTGATGTGGTCTCACAGCACCAAACCGTGGCTCCTGTGCTCCTCTTTGGGCTTTATCCTCCTGCCCTCTCTCCGGGCATCTAGTTCCCATCCTGGGACTGAGAACCAGGACGTGAAACATTCCTGTTGGAGAGAATCTCCTGTCCTCCCCCTGCACCTATCTGGTCAACAGACCCCAAATGCCACCTGAGAGCTGGCAGCCAAGGGCAATTCTGCCAGTCACTCTGGCTGGACTCCCCTTCCCAGCCTCTACCCGCCCTCAACTTACAGGTCTCAGCATCCTTGGAATTTTTTAGGATGCCACCCTTCTACTTAGCTTCATAAGCTCATCTGCCCACCATCTGTCCATCTTTGGGGACAGGGTAAGACTGAGGAAGGGGGAGTGACCAAGATGGGCAGAGACGGACTGAGAGACTGGGGAGCAAACGGAGATGGATAAGGACAGAGAAACAGAGCGTCTGAGACAGGAAAACATGCATAGGGATGGGATTCACGCCTGAATTCTGTTGTGCAGAGCTGAGGGCCAGTGTGAGTGGTGGGAACCCCAATTCCTGCCTTCTTCAGTAGGAGTCTGGCTAGCCTAGGTTTTAGGCGTCAATACATCCTGGGCCAATAGAGGGCGATCTGAACCCTCTCACTACACCAGTTACTGGCCCAACCTGGAAAAATGTGTTGCTCTGAGGGTTAGGATGTCTAGAAGTACATTGGATGTATTTCTAGAAATAGAAATACAGCTGGATGTCTAGAAATCCAGCTGCATCTCTGGCCTTACCCCCAGGTCCTGCCCAGCCTGTTAGCTATGCCCTGACATCTTATCTGATACTCACTGCCTTATAGCCATCTTCACCCCTGGCCTATTTCAACCCCACTTCTACCCTCGGTTTCACAGCTGCAGAGAAAGGATATGGAGTCAGAGCACACTTCAGGACTGGCAGACGGGTTCAAATATGAGCTTTACCAGCTCTAGCTAAGTAGTCTGACTCCCTGAGCCTCAGTTCATTTGAAGAATGGGTATGAATAAATGTACCTTCCACGGTAGTCCTGAGGAACACTGATGGTGTTACAGAACATCTGATTCAGCACTTGGTTCATAATAGCTTTCAGGTGGCAGGATGCTGGCAGGGTGTGAGACAGTGAAGCCAGAGGTTTTGGGAGTTTGCAGGTCATGTATGTTGCTGATACAAGGACAAGTGGACTGGCTGCTATTGAGTGACACAAGTATCCAGAGCCCTTCCTCTCCAGGCCAGAGAGGCAGGAGGGACTGATCCGGGGGGCAAAGGGTCAGACTCTAATGATTCCAAATATATACAAGCAGACATACCTCAGACATACTGCGAGTTCATTTCCAGACAACTGCAATAAAGTGAGTATCGCAGTAAAATGAGTCACATGAATTTTTTTTTTCTGGTGCATCTAAAAGCTGTTTACACTATAGCCTATTAAGTGTGCAGTAGCATTATGTCTAAAAAAATGTACATACCTTACGTTAAAAATACTTGATTGCCAAAGAATGCTAACCATCATTTCACAAAATCGGGTTGCCACAAACCTTCTAATTGTAAAAGATGCAATATCTGCAAATCACAATAAAGCCAAGAGCAATAAGACAAGTTATG EMBV3_35804 GCTCTGGGTAGCCAACGACGAGAACTGTGGCATCCACGCTGCCCGATGCCCCTGCCCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03216 GCTCTACCAGCTCCTGGATGAAATGGCCACGCTGGTGTTCTTTGTTCTCACGGGGTATAA Gene GeneID:617309|GPR107:NM_001099164:211_cdna Constitutive 0 NULL GeneID:617309 11 GENE GPR107 MGC166006 G protein-coupled receptor 107 EMBV3_34209 TGCTCTGTTTATGAGTCTGTTTCATTTTCCAGGATAGGTTTGTTTGTGGCATATTTTAGA Gene BVV0102_385998 + 0 NULL GK000025.2:199496-208738 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25229 CAGATTCCTTTGTCTACAGAGAGAGAAGTTGCCTTCATCTCCCAAGCGGATGTGGTGAAG Gene GeneID:534496|MYCBP2:XM_002691897:7_cdna Constitutive 0 NULL GeneID:534496 12 GENE MYCBP2 NULL MYC binding protein 2 EMBV3_13138 AGCTGGCCTCTAACCCTCCTGTGGCCTCACCCTCTGCTTTGCCTGTAAAATGAAGCCAGT Gene GeneID:509616|LOC509616:XR_084079:1071_cdna Constitutive 0 NULL GeneID:509616 25 PSEUDO LOC509616 NULL similar to Williams-Beuren syndrome chromosome region 27 EMBV3_30042 ACAACTGAGTGTCATTTCTGCGTTGGCCCAGCCACTTCACTCTTTCTGGAGCTATTAGTA Gene BVT0102_031623 + 0 NULL GK000021.2:57429005-57596460 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005882 1 XLOC_001445 NonCoding TCONS_00005882 XLOC_001445 NonCoding NonCoding - 1:1555565-1556547 - TSS2959 982 2 TCONS_00005882_1 69 0.945010183299389 1 0 0 0 0 0 0 0 0 0 0 0 2.33114454643393e-06 0.000131084232112174 0 0 0 2.68957385856111e-05 0 5.11018331986349e-05 0 0 0 9.82368922464281e-05 0 0 0 0 0 0 4.94359026825658e-06 0 NM_174800.2 CFDP2 Bos taurus craniofacial development protein 2 (CFDP2), mRNA. 1e-69 268 78.91 0.317718940936864 0 noncoding CATGTATTTACCAGTTTCTTTCCTGTATTTCTTCTTATGTATCATAATTTCCATCTGGGAATGGTTTCCTTCTGTCTGAAATATATCCCTTAGATCTTTATTTGATCTTTTAATGTCAAATATCATTGACTTTTGTTTGTCTGAGTCTTTATTTTATCCCTTTTCCGGAAAGATATTTTTTCAGTCTTATAATTCAAAGTTGACAAAAATGTTAGTGCACTTGAAAGGTATACTACCACTCTTTGACTTCTTTACTGCTGAGATCATCATCCATAATTTAATTATCTTTTCTTTGAAGATAATATGCCTTCTCTGTTTTTAGGCCCTGCAGTTTCACCTTGAATTAAATTTGCCCATTCCCATTCATTTTGGTTCACTGATTCCTAAGATGTCAATGATCAATCTTGCCATCTCCTGCTTGACAGTCTCCAATTTACCTTGATTCATGAACCTAACATTTCAGGTTCCTATGCCATATTGTTCTGTATAGCATCCAACTTTACTTTCACCACCAAACACGTCCACAACTGAGTGTCATTTCTGCTTTGGCCCAGTTGCTTCATTCTTTCTGGAGCTATTAGTAATTGCCCTTTGCTCTTCCCAAGTATCACGTTGGAAACCTTCCAACATAAGGGACTTATCTTTAGGTGTCATATCTTTTTGCCTTTTCATACTCTTCACAGGGTTCTTGTGGCAGGAATACTGGAGTGGGCTGCCATTTCGTCCTCCAGTGGATCACGTTTTGTCAGAACTCTTCACTGTGACCCGTCCATCTTCGGTGGGCCTGCACCACATACTCAGAGCCTCACTGAGTTATGCAAGCCCCTTTGCCACGACAAGATGATGACTGCAGCCATGAAATAGAGACACTTGCTCCTTGGAAGGAAAGCCATGACAAGTCTGTGAAAGTCACTCAGTCATGTCTGACTCTTTGCGATCCCATGGACTATATAGTCTGTGGAATTCTCCAGGCCAGAATAAT TCONS_00002862 TCONS_00002863 TCONS_00002864 . 3' 5914 TCONS_00002862 TCONS_00002863 TCONS_00002864 . 3' 6895 EMBV3_41666 AGCTGTGAGCTGCCCTCTCTTTACCCTTTGTCTTGCTCTGGTGTGTCTGCAAGCTTTACT Gene GeneID:509817|LOC509817:XM_002687337:2_cdna Constitutive 0 NULL GeneID:509817 5 GENE LOC509817 NULL similar to olfactory receptor MOR160-1 EMBV3_10080 TCGTGGGCTCTAACAGGCTCCTCTTCCTGCTTCCTAAGGCCTTGCCTGGTTCCAGCTGTA Gene GeneID:535479|PCIF1:NM_001103099:1219_cdna Constitutive 0 NULL GeneID:535479 13 GENE PCIF1 MGC165841 PDX1 C-terminal inhibiting factor 1 EMBV3_13786 TCTTCTGGCGAGGGTGGCTCCCACAGATAAGAAATACGTGCTACTGTGATGGCATGGAAC Gene GeneID:615965|TATDN3:NM_001080320:117_cdna Constitutive 1 NULL GeneID:615965 16 GENE TATDN3 MGC155057 TatD DNase domain containing 3 EMBV3_05212 ATGTGGATCCGCTTGGCCCTCAAATAGAAAGACCCAAAACTGCAGCCAAAAAGAGAATGG Gene GeneID:514177|IFT88:NM_001110786:43_cdna Constitutive 1 NULL GeneID:514177 12 GENE IFT88 NULL intraflagellar transport 88 homolog (Chlamydomonas) EMBV3_12422 ATCTAGGGAAACCACTCTGGGCTCGCTCCTCCGTGATAAATATCCCCCAGATAGTGGGAA Gene BVT0102_059843 + 0 NULL GK000027.2:18775560-18785637 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156100 TCONS_00156101 TCONS_00156103 TCONS_00156099 TCONS_00156104 TCONS_00156102 1 XLOC_094916 Coding TCONS_00156104 XLOC_094916 Coding Coding SLC7A2 27:18780649-18852514 j TSS116668 7140 1 TCONS_00156104_7 659 12 0.900812646109318 0.00590097787310812 0.000959125477949275 0.00502604441950071 0.00457213451768246 0.00472963865608086 0.00101092462846635 0.00387272910010402 0.00567880457359531 0.00681236992281487 0.00104310848260991 0.000307153167410525 0.000300668887204316 0.0013009042929564 0.00285638481329676 0.00143943406560679 9.53447049966187e-64 1.30043596123583e-06 3.91189313377238e-50 0.00446337964791697 0.00654998244657219 0.00332694193228724 1.41441342476829e-05 3.40317620844525e-06 1.62783166002191e-10 0.00692935438244903 0.00564370307688632 0.0022574499288198 0.000176551986558281 0.000113212155661104 2.15201030068863e-06 XM_005226025.1 SLC7A2 PREDICTED: Bos taurus solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (SLC7A2), transcript variant X3, 0.0 1.281e+04 100.00 0.99453781512605 NM_001008539.3 SLC7A2 Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (SLC7A2), transcript variant 2, 0.0 2955 80.83 0.443977591036415 TCONS_00156104_7 sp|P52569|CTR2_HUMAN CTR2_HUMAN Low affinity cationic amino acid transporter 2; 0.0 1189 91.64 0.996965098634294 3 coding 1 0 1 1 0.197821582868657 0.248210664530338 -0.0246735056341215 0.687346966150285 NGCGCCCACGTGCCCAGCCCGCTTTCCGCGGCGCCGCAGCCCCGGCGCTTTTCTCCGCGCGGACCAAGCGAGGCAGCAGCCGCTTCTTCAGTCTCCCCGAGTTCGCTCCAGCCGCTCGCCCGCCACCGCCTCCTCGGCGCGGACCTCGCACAGCCCAGTTGCCATCTTCAGAATGATTCCCTGCAGAGCAGCGCTGTCTTTTGCCCGATGTCTGGTCCGGAGGAAAATCGTCACTCTGGACAGTTTAGAAGATACCAAACTGTGTCGCTGCCTATCCACCATGGACCTCATCGCCCTGGGGGTGGGGAGCACACTGGGTGCTGGGGTCTACGTGCTGGCCGGGGAGGTGGCCAAAGCAGATTCTGGCCCCAGCATCGTGGTCTCCTTTCTCATTGCTGCACTGGCTTCTGTGATGGCAGGGCTTTGCTACGCGGAATTTGGGGCCCGAGTTCCCAAGACTGGGTCTGCCTACTTGTACACTTACGTTACTGTTGGAGAACTGTGGGCCTTCATCACTGGCTGGAATCTCATTTTATCTTATGTGATAGGAACATCAAGTGTTGCAAGGGCGTGGAGTGGCACTTTTGATGAACTTCTTAGCAAGCAGATCGGTCAGTTTTTCCGGACATACTTCAAAATGAATTATACTGGCCTTGCAGAGTATCCAGACTTTTTTGCTGTGTGCCTTATATTACTTCTTGCAGGTCTTTTATCTTTTGGAGTGAAAGAGTCTGCTTGGGTGAATAAAGTCTTCACAGCTGTCAATATCCTGGTGCTTCTCTTTGTTATGGTAGCTGGGTTTGTGAAAGGAAATGTGGCAAACTGGAAGATTAGTGAAGACTTTCTCAAAAATATATCTGCAAGTGCCAGGGACCCACCTTCTGAAAATGGAACAAGCGTCTATGGGGCTGGTGGCTTTATGCCTTATGGCTTTGCAGGAACTTTGGCTGGGGCTGCAACCTGCTTTTATGCCTTTGTGGGATTTGACTGCATTGCAACAACTGGTGAGGAAGTCCGGAATCCTCAGAAAGCTATTCCTATTGGAATTGTGACTTCTCTGCTCGTTTGCTTTATGGCCTATTTTGGGGTCTCGGCAGCTTTAACACTGATGATGCCGTACTACCTCCTGGATGAGAAAAGCCCACTTCCTGTGGCCTTCGAGTACGTTGGATGGGGGCCAGCCAAATACGTCGTTGCAGCGGGCTCCCTCTGTGCTTTGTCAACGAGTCTTCTTGGATCCATTTTCCCAATGCCTCGTGTAATCTATGCTATGGCGGAGGATGGGTTGCTTTTCAAATGTCTAGCTCAAATCAATTCCAAAACGAAGACACCAATAATTGCTACTTTATCATCGGGTGCAGTGGCAGCTGTGATGGCGTTCCTTTTCGACCTGAAGGCCCTTGTGGACATGATGTCCATTGGGACACTTCTGGCATACTCTCTGGTCGCGGCCTGTGTTCTCATCCTCAGGTACCAGCCCGGCTTATCTTACGAGCAACCCAAGTACTGTTCTGAGAAAGAAGCTCTGGGATCGTGCGCCAACAGAACCTCCAAAAGCAAGTCTCAGGTCACCATGCTGCCAGGACAGGGCTTCAGCCTGCGAACCCTCTTCAACCCCTCGCTTCTGCCTACAAAACAGTCTGCTTCTCTCGTCAGCTTTCTGGTAGGATTCCTGGCATTCCTCATCCTGGGCCTGAGTGTTCTGACCACGCACAGCGTCCACACCATCGCCAGACTGGAGGCATGGAGCCTGGCTCTCCTGGTGCTGTTTCTCGCTCTCTGTGTTGCCATCGTGCTCATCATCTGGAGGCAGCCCCAGAATCAGCAGAAAGTAGCCTTTATGGTTCCATTCTTACCGTTCCTGCCAGCCTTCAGCATCCTGGTGAACATTTACCTAATGGTACAGTTGAGTGCAGACACCTGGATCCGATTTAGCGTCTGGATGGCGCTTGGTTTCCTGATTTACTTCGCTTATGGCATTAGACACAGCCTGGAGGGTAATCCAAGGGATGAAGAAGATGATGATGAAGATATGTATTCAGACAACATTAACGCAGCAACAGAAGAAAAATCTGCCATGCAAGATGGTGACCATCACCAAAGAAACCTGAGCTTACCTTTCATTTTCCATGAAAAAACGAGCGAATGCTAGTGCCTGCTGGGACAGAACTGGTCCACAGTCTGCACGTACATCGTCTGCGTGGAGGGATCCATGACGATGTCATCACCACACCAGGTTGCCGTGGATTTGCTGCAGACACAGTTCACCCTAATTTACACTTACTCACGTGAACAGCACCTTCTCTGATGGCGACTCCATCTAGGGAAACCACTCTGGGCTCGCTCCTCCGTGATAAATATCCCCCAGATAGTGGGAATGTGGGCATGTGTGTGCATATGTTTGTATATGTTGTGGAATATCAATGTTAAAAGTTGTTGGTGTCTTACTCGTATTGCATTGCATTTTTCCAGTGTTGTCATTCATCGGTAGCCTGTACTGCACACACTAAAATGGAGGTGATCGCTGAATAGAAAAGTATCTTGAATGTGCCGGGTGTGGTTGGGGAAATAACTGTCGCTTTTCCTTATTGGACTTTATGTCAAGTTAGACATCCTAAAATTGCATTTACCTATCATTGTGTCTGTCATTGGTCTGGAGTAAGGGGAGGGGTAGGAAATGAGCCTTTTCTGTAACTTATAAATGTCGGCAGTGGGTTTAGCACAGTTTTCTTCTGTGAGGTATGACAGTTTGCTGAAAGTTTAGCCAATCGGAGTGCTTGTGTCTGCACTACCCCGCAGGGCAGGAGCGGCCTTCTGTGTCAGCAGGTGGCAGGCACCCCCTTGAATGGCTGTCTTCTTTGAGACAGTGGTCCTTAAATGTGAGGCCTTCACCTTGTGTGAATGATATCTTCCCCACTCCCCCATTCCGCCCCAGTCCAGTCGGGGTGGAGAGAGGTAGTGTGAGCTCCTAGGGACCCTTTGTGCTGGAAAGTGAAGGTGGTCCCCATGGGCAGGAAGCTCGTGTAAGTGGCAGAGAGGAGGATGCATTTGAAGATAGAGTAGTTACGTGCTTGGCTGAGATCCCAAGCACTCCTGTTTTAAGTCACTTAAAATAAGCCAGCAGAACCTCCCAGGTCACATAATCGGTGGAATGATTTATACCTTTTTCCATTAGTTAGTAAATAATCACAGTTCACAATTTATTTAGGGGTTTTTTTTCTAAGCCAGTAATAAATTCTATCTTTACTACATGCAAAAAGGCGGGGGGGGGGGGGGGGGGCGATGAAGGAATACAAGAAAATTCCCCTGTTCTGATTTTAAAGTGCCTGTTCAGTTGTTATAGGGCATTTGGCCCAATTTGAGGGGTTTGGATTTAATTTGCTTCTGATGTTTCTTTTGGAAACATTTAGGGATATTTTTCTTCCTCTATCCCATAAATTGTTCAGCACTTTTAATTTCATTTATTTTTAAATGACCACACTAAAACTACTGATACAAGTTCCAGTATTCTAGAAAAACCCATCAGTGGTTGAGGAATAGAATATTTCAGTTAAATACATGATTATTTAAAACGTCAAGCCAAAAACATTAACCTAATTGAATTAAAGCCATAGAAACACAATAACCTTTATATGAGTAATTTGTTTTTAAATGTATGACTCTCTAATTACTGTATTTCATTTTATAGGGTTATCCAATAAGTGGACTACTTATCTTCGTATGGTTCGCTTCTCATGAATTATTTTTCTTACAAATAATTACATGGTTCACGAGATGAGACTAGCACATTATCAAGCCCAGGTGACCAGCTTAATACAAAGGCAAAGAAAACACTGATTTTCTGACAGCTCTTCCAAAAGATCAGCCATTTTATTTTCATCATTAAAAAGCAAGTTTTGATTGTTTAGGAGTTTCTTGTGATGAAAAATCCAGTAAACAGGTAGGAAAGTCTGGGTGCCAGTGTTGTAGCATCTCGGATCTAGAACTCAGAACTAACATTCCACAATTTCCAGGGTGCACATAGTAAAATCTGAGGCCCAGTACTGCATGTTTTACTGGAGAGGAAGAGTTGGCTGTGCAAGAGGCAAAGTATTTCTGCAATCATTACTGTGGGCCTAATCCTAGATCTTTGCTGTTACTGCAGCATTCTGAGAAGCACTTTGATTCGGTAATCAGGCCCTTCACGTGGGAATATGAAGAGTTAATTTCACGTGTGAATATTAAACCTTTTACTGAGCACAATCAAGAAATTTATTTAGAACATGACAGGCAGCTAAAACTATTATGCCCACTGTTCAATTAGGAGCAGAATTGAGTTAAAAATAATTTTTCCATCTTGAAACACTTTACAAACACAATTGTCTATGAAAGATGCTTTGTTTGTGACTATCCTTTTTTTCTGTGAAAACTCAAATATCTGTTCATATGTATGTGTGAGTGTATGTGTTAATATATACACGTGTATATATGTGTGTTTGTGTGTTTCAAATGTTGGTGTTTAAGTCAGCTGGGTTTATGATGGGCTTTGGAAATGATCCTGTTGTCTAGATTTTAAAAACCCAACTGACAGAGAAAAAATGTTTTGTATTGATAGGTATGCTTATGCAAAATGTTTAGGTTTTAAACTATTCTGAAATATATGGCAATTTTTTATGTATAATATTTTCTATAGATAGATTCTTTCAGAAAGATATATTTATAATGTTTCTAATATGAAATCACTGAAGTCTAGTACATTAGGTGCTTTATGATCTGAAATGCAGTGGGGTGGGGGCATTAGGGAATTTCTGTTTACTTTTTTCTGCTATGCCTTTTCTGACATTTCTGTCTTGGTTTGCGCTTTTTAAGGAAAAGTCAGTACTACCAGGTCTTTTTCTGTCTGTCTGTTACTACATTTGAATTCACAACCTTTTGAACAAAATGTTTTTGCTTTCTTAGGATTGCCAAAATGTTCTGTGTAGATTTTACTAGTAATCAGACACACTTATATAGACTTCTTTCCAGAAATTAAAAAAAATACATATGCATTCTCTTAATTGTGATTGATTTGCACTAGGAAATCTGCTCTCTGAACATTTTCAGTGAGAAACTTCTTATAATAGCACTTTTATTTTATACTCTAATGATTTGTGAATAACGATACAAAGGCCATACCGACCCTACATTTAACAAGGTAGTTATGCAAGTCCAAATTTTGAAACTATTTAAACTACTTATATTAGAACTTTTGATATATACTGAAATACAAATTATTGCTTAACTAATGTAATTTTCCCCACAGACGAATATCTGGAAAAGTAAGACCAAAACATCATTTGGGATATATACATTAATGAAAAACTAATGTTGTATCTATAAAACCTTCTGTTGTCAGCCACACTTGATAGAAAATATGTTTCAGAATTATCTGTTTCCTTTAAAAGACAAGACCCTAATCTTCTTTTAATTTTTCTGAATAAAGGATTTTTTAAACTTTAAAATTTCAAATAATAAATTTAAAATATTTTCTAAGTCCTGAGTATGTTACAGTCTTTTGAATTAGAAATTATATTTACCAAATTATTTTCTAAATGTATTTAACTGTTTAGCAGGGAGAATAAGGAAGAGTAATCGCCCACCAAGGCTGATGATGCTGGAGGGACTAGATTAGTCTGAGCTCCTTTTCCTCTTAGATCAGCATATTCTGAGATTATAAACCTCAGACGCAATTGTGCCAAGATTCCAACTCTTCCTTCCCTGTGATGTTGCCCGTGATGTTCTGTGCCTGGGTATCTGCTGATATGCTTCAAGTGACAGTAGAATTCAAACCAAAAATATGAATACAATGTCCCACCTGATTTTAAAGGATTGGGTTTAGAGTGTGCATCAGGAAATATTAATATACACGTGCTTTGTGTGAATGTCTTGTGGGGGTGTTATTAGCTTGTTTTGGGGGCTTGTTTTTGATTTTTGACTAGTGCCAAAGTAGTGTCTTCTCTCTACATTTTCTACCTAACATTTTCTAGCTTGTTCTAATATATCAAGGGAAGAAGTACCAAAGTTCACGTAGGAACTAATGCCAGCACAGATCATTGATTTTCAGACACATAGATGTGTGAAAATAACATTGTTTGACTTCATTGTTTAGCCGAGTTTCTTTTTTTATCTCCTTGTATAATTATATTTAAACATTTTTAATGGCTTTCTGGTTTATGAATTTTGAAAGGCCAGATCTACTGTTGTTGTGGTTGTTGGTTTAGGGGTTGGTTTTTGTAACATTCGTTATTGTTTTTATGTACGCAGTTTAGTCGTGTTCATTTCAAATGCATTTTGTTACGGCTCAACCCAGTCGGCAACCCTGGGAGCAGCACTGTTGTAGCTTTAATGCACCTTAGCTGAAGCCACTGCCACTATCTCTGGCTTTCAAGAGCCTTCAGTGACCACTGGCAGCAGCTCCATGGGGATCATAGCCAGGACCGTGGGTCAGGCAGGCTGCAAAGTGTGAGTGTCTATAGCTACCTTTGTTGGGGAGTCTTGGATGACAGGGTAGGACATGAAGTGAAAAACTAAGGTAGTTTGGGGTCCTTCGTTTCAGCTCCGAACATCCCATGAGTACAAGGTAAATGATAAGGACCAAGGGCCCTCTCCGACTCACGGGAAGGATGGCTGCTCCCTGGAATGCACCATAGGCCCTGGCCCCTGCACTTTCTGTGCCAGCACCATCATCCTTGCGGGGGAAAGCACACGCGCCACGGCTCCGTTGGTAAAGAACCTTGTATTGCCAGCGTGGCAGGTTTCTCTGGCCCGTGCCTGGTTAACAGGCTCTGCTTCATCTTTGGTATCCATTTGTTTCATTGTTTTCTTCTGTTATCGTTGTACTTAATAGAAACCGTTGATAGGGCCTAAAACTCTACCAAAATTCTATGTCTGTAAAAACCAAAAGATACTTTGGTCTTACTCAAATACAGAGATTTTTTGTGTGTGTGTACGATTGTAGATAATTCTAAATTTACATGTTTTTGATGATAATCAGTGTTCCTTTTTGCTTATAACGTTGGATTATTTTTTAGAATTTGTAATAAATAAAAACTGCTGCTTTACCACTGTAACATGTGCTTTCTAACCATGTATTTTTAAAATAAATTTTAATATGACTTATCA EMBV3_39384 GTGGAGTCACGTGTCAAGGCTCAGCTGCAGGCCCCAGGCCCGGGTGTGGACTTCATTACC Variant GeneID:524652|C18H16orf48:NM_001035350:297_cdna 570^695 4 EMBV3_20512 GeneID:524652 18 GENE C18H16orf48 C16orf48 MGC127802 chromosome 16 open reading frame 48 ortholog EMBV3_04972 GCTTGATACAGCAGAGGTGAGCTACCAGCCAGTCTAGCCTAAGTGAAAAGTGGAAAGATT Gene GeneID:616647|MCFD2:XM_002691308:429_cdna UTR3_Alt 2 NULL GeneID:616647 11 GENE MCFD2 MGC128641 multiple coagulation factor deficiency 2 EMBV3_21874 AACTCAGGGTTTGGTAAATTAGTATAAAGAAAAGTATGCACCAACCAGATATTTGTGTAA Gene GeneID:521470|TRAPPC6B:NM_001038134:23_cdna Constitutive 4 NULL GeneID:521470 21 GENE TRAPPC6B MGC133693 trafficking protein particle complex 6B EMBV3_35203 AAGGCGTATACATTTATGGGCTGTACATGGACGGAGCAGCCTGGGACAGACGGAATGGAA Gene GeneID:525414|LOC525414:XR_084643:36_cdna Constitutive 0 NULL GeneID:525414 23 PSEUDO LOC525414 NULL similar to dynein, axonemal, heavy chain 8 EMBV3_09637 AAGAGGAGCAATGACCAAGAGCAGACATACTGACCTACGAAAGGAGAGGCCAAGAGACAC Gene GeneID:614645|SPN:NM_001103102:395_cdna Constitutive 0 NULL GeneID:614645 25 GENE SPN MGC140318 sialophorin EMBV3_28166 CATTACTGGACATGTCAGCATCAACTCTCTCAAAATAGCTTGGTCACTTTATGAAGGGGC Gene GeneID:524868|MED13:XM_002695603:174_cdna UTR3_Alt 2 NULL GeneID:524868 19 GENE MED13 NULL mediator complex subunit 13 EMBV3_37851 GAGGCCGGGACATAGAAAAACTAGCAAAACTACTGTATGTTACGCGCCTGGCGGAGAATG Gene GeneID:514193|FILIP1:XM_002690029:14_cdna Constitutive 0 NULL GeneID:514193 9 GENE FILIP1 NULL filamin A interacting protein 1 EMBV3_26129 TCTCTGACATCCCCTTCTGAGCCTTCAGTGTGGGCACATCTTCCCCGTCCAGCTTTCGGG Gene BVT0102_294084 + 0 NULL GK000011.2:10740085-10771662 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33512 CTGTTTCTTCAACATGCAGATCCACAGCACTCACATCCACATCACCGCCACCAACGCTTG Gene GeneID:514433|ZIC2:XM_002691972:44_cdna UTR3_Alt 2 NULL GeneID:514433 12 GENE ZIC2 NULL Zic family member 2 (odd-paired homolog, Drosophila) EMBV3_27923 CTTGCGAAAGTGATGTCATCTGCAGCCCGACTTGGCTCCCACTCCTAGAAAAGAGGGGCT Gene GeneID:784508|RTBDN:XM_002688760:67_cdna Constitutive 0 NULL GeneID:784508 7 GENE RTBDN NULL retbindin EMBV3_19806 GCACAGACAGCAGGCATAGCTGCCGCGGCGTCTGCCATCAAGGGCCTGACCATGGGGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31688 GGAAGACCAGCCCATGAGTCCTTCTTTCCAGGACAAGCAAAAGGCTTAATCCACCCTTGT Gene BVT0102_308159 + 0 NULL GK000030.2:140975751-141003991 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41396 TCGCGCAGCTGCTGCGTGCCGAGCCCTATCCCGAGCGTGCCGTGGCCTTCATGGACCAGG Variant GeneID:100296331|LOC100296331:XM_002688545:162_cdna 452^751 1 EMBV3_31842 GeneID:100296331 7 GENE LOC100296331 NULL similar to nuclear receptor subfamily 2, group F, member 6 EMBV3_28667 CATCAGCTGTTCGCGCGTCTTCTCCTCCAGGCTGCCTGCAGGGCCGCTGGGCATCTGTTC Variant GeneID:445422|VKORC1:NM_001003903:242_cdna 233^342 1 EMBV3_23562 GeneID:445422 25 GENE VKORC1 NULL vitamin K epoxide reductase complex, subunit 1 EMBV3_39489 AGGGGCATCTGTACACCAGCACAATGCTAACACACAAAGCACCCTGGACACAAATGGGAA Gene GeneID:539205|BRUNOL6:XM_002690490:438_cdna UTR3_Alt 2 NULL GeneID:539205 10 GENE BRUNOL6 BRUNOL6 bruno-like 6, RNA binding protein (Drosophila) EMBV3_41855 GGTCATCACTTGGAGTCACCTAACATCTGAAGCCATAGGCTGGAACATCCCACTCAGAAG Gene BVV0102_226159 + 1 EMBV3_09360 GK000009.2:51077753-51100280 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08916 CTTCAGGCCCTGTCCTGCACTTAACTTCTCCACTGAAGACTGTGCTGTTTTGTTTCCAAG Gene GeneID:539715|CNRIP1:NM_001076183:62_cdna Constitutive 0 NULL GeneID:539715 11 GENE CNRIP1 C11H2orf32 C2orf32 MGC139773 cannabinoid receptor interacting protein 1 EMBV3_13564 ATACACTTTATTTTGTAGCTGAAAATGATGGGAAATCAACCTGTCTTTGAGGATATGCCT Variant GeneID:281249|IL18:NM_174091:14_cdna 241^329 1 EMBV3_08046 GeneID:281249 15 GENE IL18 NULL interleukin 18 (interferon-gamma-inducing factor) EMBV3_20262 CACTAAATTACTCCTGGTGGAAGATCTCACTATTCCCTTGCTGGGGTGGGAACTGATGCC Gene GeneID:510780|TOMM22:NM_001100335:40_cdna Constitutive 1 NULL GeneID:510780 5 GENE TOMM22 NULL translocase of outer mitochondrial membrane 22 homolog (yeast) EMBV3_30220 TCCAAATCACACCATCTGCGCCCTCACTTCTAACAGGAACCTGGTATTTAGGAAAGGGGC Gene GeneID:785717|LOC785717:XM_002687750:108_cdna Constitutive 0 NULL GeneID:785717 5 GENE LOC785717 NULL similar to sulfotransferase EMBV3_40549 ATAGAAGCAGGTCCACTGAGAGGTGATCAGGGAAGCATATTCTCACCCACTGATGCAGGG Gene BVV0101_049497 - 1 EMBV3_17105 GK000021.2:45234066-45302731 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06736 TGCAGACGATCCTCACATTCAGCCTCCCATTCTGCAGCTCCAACCACATCAACCACTTCT Gene GeneID:617467|LOC617467:XM_002686613:123_cdna Constitutive 0 NULL GeneID:617467 3 GENE LOC617467 NULL similar to olfactory receptor Olr1347 EMBV3_12770 GAAGAGGACGGCTATTACAGTATGCGGATTTGGGTTTCTTCTTTTCATCTGCAAGCTAGC Gene GeneID:281184|ASZ1:NM_174063:21_cdna Constitutive 0 NULL GeneID:281184 4 GENE ASZ1 GASZ ankyrin repeat, SAM and basic leucine zipper domain containing 1 EMBV3_29994 GACCCTCTGCTCATTGTGCTCTCCTACATCCTCATCCTGAAAAGTATCTTGCACACAGCC Gene GeneID:511284|LOC511284:XM_002693272:38_cdna Constitutive 0 NULL GeneID:511284 15 GENE LOC511284 NULL similar to olfactory receptor Olr140 EMBV3_43162 TCCGCAGGACAGTGACCGTTCAGTCGAAGAAACATCTGATCGAGCCTTTGCAGTATGACG Gene GeneID:519302|MRPS9:NM_001035332:38_cdna Constitutive 0 NULL GeneID:519302 11 GENE MRPS9 MGC134295 mitochondrial ribosomal protein S9 EMBV3_12612 GGGTCCCCAATTACGATGATGTGAAGAAGAACTCGGGCATCCTCAAGCCATTCAGTGGGA Gene GeneID:100336912|LOC100336912:XM_002696370:72_cdna Constitutive 0 NULL GeneID:100336912 20 GENE LOC100336912 NULL pikachurin-like EMBV3_30010 TGGCCTGTGTCAGGGAATCCTGCCTCTCTACCGGACTATTAGAGTGCCTTTGTTAGAATC Gene BVT0102_215948 + 0 NULL GK000011.2:47885886-47915425 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024964 TCONS_00024965 TCONS_00024963 TCONS_00024966 TCONS_00024962 1 XLOC_014624 Coding TCONS_00024966 XLOC_014624 Coding Coding - 11:47883087-47889140 - TSS18217 5925 1 TCONS_00024966_5 303 0.594261603375527 2 0.0213152676801057 0 0 0 2.63516823022704e-17 0 1.47694804429689e-181 3.70729602239233e-07 2.95319288699184e-05 3.55391729595025e-107 0.000151274013120504 0.000269814316674471 0.000163612540181696 0.000396921522323216 0.000944409235777729 0.0010149279794159 5.15732654587102e-06 0 1.54232923731777e-14 0 0 7.68538731059636e-07 7.28145940146192e-07 7.14223697747905e-21 8.05075912834247e-18 0 2.5756547609182e-11 0 8.46154224740492e-05 3.05313399483807e-05 0.000182650994223115 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 1449 91.91 0.170295358649789 XM_005267112.1 TBP PREDICTED: Homo sapiens TATA box binding protein (TBP), transcript 0.0 1063 78.19 0.218396624472574 TCONS_00024966_5 sp|P29037|TBP_MOUSE TBP_MOUSE TATA-box-binding protein; 5e-169 476 77.22 0.996699669966997 1 coding 0 0 0 1 0.0912786326838145 0.608710824528881 0.081566140552888 0.252098619195111 CACTTCCTGCCCAAGTTTGCTGGCGAGGTGGGAGCAGGAAGTGAGGCTGAACAGCGCCCCTCAGCTGGGCGCAGCCCCGCAGCCTTGTTTTCATTGCGTTGCTGTCTTCCTGCCGGATGCAGGGTGCTGCAAGACCACCTCCTCCTCCATCACTAGTTCATGTCAGCTACATCCCAGGCAGGCACACTGCCTTCTGATGAGTGATGAGGAGTCTGGTGTGCTATAGTTCATGGGGTCGCAAACAGTCAGACACAACCGAGCAAATAACACACACACCACACTGCTTTGTATAATGTAACATTAAGTGGAGTTTTGAGGTTAAGAGAGAGATGGGCATACCAGACCACCTGACCTGCCTCTTGAGAAACCTGTAAAAAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTGATTATTTAACTTATATGCGGAGTACATCATGAGAAATGCTGGGCTGGAAGAAGCACAAGCTGGAATCAAAATTGCCAGGAGAAATATCAATAACCTCAGGCATGCAGATGACACCCCCCTTATGGTAGAAAGTGAAGAAGAACTAAAGAGCCTCTTGATGAAAGTGAACGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACAAAGATCATGGCATCCCGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTAATTTTTCTGGGCTCCAAAATCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGACGCTTACTCCTCGGAAGGAAAGTTATGACCAAACTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCCAAAGAATGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCGTCCTAAAGGAGACCAGTCCTGGGTGTTCATTGGAAGGACTGATGTTGAATGAAACTCCAGTACTTTGGCCACCTGATACGAAGAGCTGACTCATTGGAAAAGACCCTGATTCTGGGAAAGATTGAAGGCAGGAGGAAAAGGGGATGACAGAGGATGAGATGGTTGTATGGCATCACCAACTCGAAGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGAGTGCTGTGGTTCATGGAGTTGCAAAGAGTCGGACATGACTGAGCGACTGAACTGAACTTGAGGTTAAGAAATGGAAGGAAGTCCACATGTATGCTTATTAGACTGCATTGAGGAACATAGTGTACCCATATCCAGTCATTATGACCTTCCCTGAGTTCCAAAGGGCAGATTCGAGCAGTTGCTAATAAAGTGAAGAGCAGCCAAGAACCCAAAAGAGGCAAGATTAAAGGGACCAGATAAACTCATCAAAAGTAGGAGACCGCCCACCTGAGATGAGATTAAGGGAGTGCAAGCCCCACACACACACTAACCTTGTCAGACTCCACCAGTATAAAAACCCTCAAGTTCTAGGTTTTCAAGGCAGAAGCCTGGTATATCTCCCTTTGCGTTGCAAAGTGGTAGAGCTATTCTTTTCTACTTCACCCAAAACTTGTCTCCAGGATTTGATTCGACACGGATGTACAGAAGAGCTAAGCTTTCAGTAACAGAAGTCAGTCTCTGAGAAGAGTGTGCTAGACTAGCTCCAGGAAAAGACTGGATGCTTTCCTAGGCAACTTCCAGTCTGAAGGTTTTGGTTCACCCAGAAGACAGTGAACATCATGGATCGGAATGATAGCCTCTCTCCGTTTGACCAGTATCTGGCCTCCCCTCAAGGTGCCATGAGTCCTGGAATCCCTGTCTTCAGTCCAGTGATGCATTATGGCACAGGACTGACTCCGCAGCCAATTCAGAGCACCGACAGTCTGTCTACTTCAGAGGAGGAGCAGCAGCAGCAGACGACGGTGAGAACAGGTCGGCTTTCGACGACATCCCAGGAGGCAACCCAGGAGGCCTTGGACCAGACACCACAGCTCTTCGACTCACAGCCTCTTACGACCGCACCCTTGCTGGGTACCACTCCCCTGTATCCATCCCCCATGACCCCCATGATCCCCATGACCCCTGCCATGCCAGCCTCAGAGATCGCTGAGTTGGTGCCACAGCTGCACAATGTTGTATGCACAGTGAATCTTGGTTGTAAACTTGACCTAAAGAGCATCGCCCTTCTTGCTCGAAATGCTGAATATAATCCCAAGAGGTTTGCTGCTGTAATCATGAGAATAAGAGAGCCCCGAACCACTGCACTTTTATTCAGTTCTGGGAAGATGGTGTGCACAGGAGGCAAGAGTGAAGAACAGTCCAGGCTAGCAGCAAGAAAATATGCCAGAATCATACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGACTTCAAGATTCAGAATATGGTGGGGAGCTGTGATGTGAAGTTCCCCATAAGGTTAGAACCCCTTGTGCTTAGCCACCAACAGTTCGCTAGTTATGAGCCAGAGTTATTTCCTGGTTTAGTCTACAGAATGATCAAACCGAGAATTGTTCTCCTTATCTTTGTCTCTGGAAAAGTTGTGTTAACAGGTGCTAAAGTCAGAAGTGAAATTTATGAAGCCTTTAATAACATCTACTCTATTCTAAAGGGTTTCAGGAAGACATCGTAATGGCTGTCGTGTGCTCCTGCCTCCTCCACCCACTTTTTTTTTTGTAACCAATTGGTTTTGGTGTATTTGTTGTGTTGTAGACGGTCCCATGTGGTGAGAGGTTGGACTTGAGGTTGTAAATCACAGTTCCAATTGAAACTCTCCTGCATGTGTACCCCATAAGGGTGCCAAGAAGGGGTATTATTTCTGCAGGAAGAACACCAGAAGTGTTACTGTAAGTTGTTGAAACTGTGTTACTAATCGGGCAGTAATGTCTGTTTATTTATATTTAGATTTTAAACATTTCATGCTTTTTTTAAAAAGTTTTTGAAAATTCTTGTATTTTATTGATTGATTTTTGGCTGTGCTGGGTCTTTGTTGCTGTGCACAGGTTTTCTCGAGTTGTAGTATTTGGGCTTCTCCTTGCTGTGGCTTCTCTTGTTTCAGAGCATGGGCTCTTAGGTCACTCAGGCAACAAGCTTAGTTGCCCTGAGACATATGTGGAATCTTCCTGAATCACGGATTAACTCCCGTGCCTTGGCCGATTCTTAATCATTGGACCACCAGAGAAGTCCACTTACTGCTTTTGACAAGTTGGTTTAAGGGGCAAAACTTTGTGTTAAGGCACCTCAACAACTGATTAGACTTTGTTTTATTTAATTTCTTCCCCATAATCCAGAGTTTTGTTTTGTTTTCTACCAGGAAAAGAAAAATCTGTTTTGAAAGGTGTTGTTTTCTAATTGGCAACTCTTAAGGATTATTTTTCTACCAGACACATTCGCCTTTTCAGTATTTCAGGACAAAAAAAAACGTTTGCATTCATATTAATGAACATAAATGGCTGCACATATCTTTCTTCCTTCAGAGTACTCTGTAGAATAAATGCTGTTTATAAAAGTGTTAAGAAACAAACCAAAAAAAAAGCCTAAAATGGAGTCCCTTGGGCTAAGCCCCATTGTGATTAGTTTAGGCCCCTCCCAGGAGTAGAATTTTAAACCAATTAATCCAGAATTACCCAATCAACTCCTGTGATGTAATCTGCCTAAAGCCCCCTGCCTTTCTCTAAGGGAGGTGACTTTGCCTAAAATAATCCAATCTTAACTTCCTCTTCCCATCTTCCTTCTGTCTATGAAAGCCTTCCATTTTGTTCAGGTCCTCAGAGTTCTTTTCTATTTGTTAGGAGGCATAACTGCCAGACCATCAAATAAAGCCAATTAGATCTTCCAGTTTACTCAGTTGAATTTTGTTTTTTAATGTAACAAAAGCAGCACTGCAGAACAGTGAGGAAGATAGATTTTTCAATAAATGGTGTTGAAAAAATATGATATCTGCAAGGGAGAACTAATGACATAGAATGCCTGCCTCACAGCTTGGACAAAAATCAATTCCAATTGAATCATGTATCCATGAAGCTTTTTTACAAGACATCCTGTGAGAATATATCTTTATGATCTATGGCAGTGGTTTTCAGTCTGGGCCAATATTGCTCCCCAGGAGATATTTGACAATGTCTTGAGACTTTTTTTGGTTGTTAAAACTGGGGTGGGGGTAGGGACTTCCTGGTGGTCCAGGGAATTTAGTTACACAGAACTGAGTGAACTGGTAAATATGGTTATAATTTTTATGGCTTCTATCTTAAAAATACTGGTTTAAATCTGTGTTTTCCAAGAGTAAGGAAAATCTCCCCCTTAAGCTAATTATGACTTACAATAATTTGGTAAATTATACCTTTGTAAGAAGAATTGAAACATTTATCTTTTCCCCTCTATTTGGTTGATCCTGCGAGCAACATTTGCCTGTCTCAAAGATTAAGCCATGCGTAAGTTGTGTACAGCCTGGACAATGAAACTATGGATAGCTCATTAAATCAGTTATGACTCCTTTGGTTGCTTGACTATTGCAAGTGGGTTACAACTAGTTATACTAATCATTGTTTTAATTTGTTCTTTGTTTTCAAACTGTTTGTGCTTCGTGCCTCCCTGCTGCACTTCGTCTTTGTCAATGGTACTGGCTGCATTACTTATATCTTGTCTAATTTATAAGACTGTTGTCTCGTGTAATACCCAGTGGGTAACCAGGCCTCCAACAAAGCTTAAATGACTAAAAATATAACATAAAATAAATGTAACAGTTTGATTCTAGGTATGGGAAGAAGCAACAAGGGAAAATGTCTGCTGGATCATAATTAGGCACAAGATCCAGAGAAACTTATTATGACTGGGGTCTAATCCAAAATTTAGCACCCGGAGTGGCATATCAAGAGCTTTCACCCCATCTGGGATGAGCCTCCCAGCACCGTGAGACAAAATTTGATCATGAACTGTCTCCCAAATATTGATCAAATTTCCAACCAAGAGGGGAGAATCTGAGAAATGGAATACTTCCTGCTTGTCAATCATCAGCAATTTCAGCCCTCCAGTGGGAGTGGATGAGCCCTGAGAAAACGGAGGAAGGCGAATACCTGCCACAGTCATCAGATTGCAGCCACTACCTATGGTGAACCCTGAGGAAATTCAGGATATGAAAATACAGGATTACAGGCCCCAGACAGCTGAGGTGTAAAGTAGACACATACCAAATAGGAACAGAAGAAGACAAATATCAACAACTGGAACACCGATAGCAGACACTCTTGGACGGATTCATCTGATAAAGCAGTTAGAACAGTCATCACTCCCTTTTCCCACAAGACTGTGGAATGGACATTGACAATGGGGAATTGTAGCAGGGAAGAGCCAATTCTGACTCCACGATGGATCTGTTTCTTTGACCTTAACCTTTGTTTTTGCTGCTTTTGTTATTATAATCATACATAATGGCCTGTGTCAGGGAATCCTGCCTCTCTACCGGACTATTAGAGTGCCTTTGTTAGAATCTGACCCAGCCCACCTGTGAAACTGGCTCCCAGACCTGGATAAGATGGCTAATTTGAGACATTAGTCTGCTATCCTCTCAGTCAGCTGGCTTTCTGAATAAAGTCGTATTATTTGCCTAAACACCTTGTCTCTCAGTTAATTGACCTGTCATGCAATGAGCAGGCTTAAACTCTGTAACATGCAGAGTTCCCAGGTATGGAGAGCCTTTCTATCCCCCATTTCTTATAGGCAAGTCTCCAGCCTCCATGGCCTAGCTTGGGTTCCAAAAGGTG TCONS_00024957 TCONS_00024958 TCONS_00024959 s 3' 4063 TCONS_00024957 TCONS_00024958 TCONS_00024959 s 3' 4063 EMBV3_05740 CTGTTTACCTGTTCATCTCTGTGCTCATCCTGGTGGGCTTCGGTGCCTGCATCTACTACT Gene GeneID:535121|LOC535121:XM_002687952:45_cdna Constitutive 3 NULL GeneID:535121 5 GENE LOC535121 NULL similar to rCG60321 EMBV3_09270 GCGATAAATGCAAAACAGTAGCTGTTGGAGAAGGAAGAATGTTCTTCAGAAATGAGGTGA Variant GeneID:533538|SGMS1:XM_002698368:152_cdna 763^843 4 EMBV3_16826 GeneID:533538 26 GENE SGMS1 NULL sphingomyelin synthase 1 EMBV3_21194 CTTCTGCTGGTACTGCCTCGAGTCCCTGGATGACGACTTCCTCCTGATCCATTATGATAA Gene GeneID:618176|RNF144A:XM_002691488:385_cdna Constitutive 0 NULL GeneID:618176 11 GENE RNF144A NULL ring finger protein 144A EMBV3_29063 AACTTGATGAGGAATTCCAACTCTTCCAAGGGGCCAAGGGTCTGGCCACGTGGTGGCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07537 CTACAAGAAGCCACATCACCTCATCTCTGGTAACTGCACCACCATTGGACTGGCACCTTT Gene GeneID:541014|LOC541014:NM_001034721:208_cdna UTR3_Alt 1 NULL GeneID:541014 22 GENE LOC541014 MGC128724 hypothetical protein LOC541014 EMBV3_36980 TTGGCCTTGACTCTCCAAGGAGCAACGCATACAACTCGGAGGGATATCTGGCTGTGAAGT Gene GeneID:513094|MGC143140:NM_001083418:11_cdna Constitutive 0 NULL GeneID:513094 13 GENE MGC143140 NULL LAMP family protein C20orf103 homolog EMBV3_41459 TACTGCAGCGGGTGTCAGGGTGAGGGACGGCCGGCGCACCCCGCCGCTCGGGGGGATGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17877 GGCCCTTCCGACAAGGCTATCAGCCCCTAGCCACCCAGATAGACCCAAGTGACCTCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16206 CAAAGGTAAGTCTCCCCCATTGTACAGTTTTCGGACGGCTTAGGACCCCACTCAGGGTGT Gene BVV0102_429852 - 1 EMBV3_14589 GK000030.2:70346816-70399108 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18624 AGCTCTGCCTACTGCCTCCCCAGCACCAGGCATGGATTTTCCAGCTATACAGACAGCTTT Gene GeneID:540951|PAX3:XM_002685656:404_cdna Constitutive 0 NULL GeneID:540951 2 GENE PAX3 NULL paired box 3 EMBV3_10644 CCATTTTGTTCCTGATGGGAATTTGTTCCCAATTAATGAGTACTACAAATCATGCCACAG Gene BVT0102_044201 - 1 EMBV3_33083 GK000030.2:58224953-58269721 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11485 CAACACCTACAGTTTCATTCACGCAAAGAAGGTCAGTTTCACCGTGGAGGTCCTGCTTCC Gene GeneID:282469|SEC14L2:NM_177943:20_cdna Constitutive 1 NULL GeneID:282469 17 GENE SEC14L2 MGC133745 SEC14-like 2 (S. cerevisiae) EMBV3_03121 TGTGCATCCACTGCAACGCCAAGTTCGTGCATAACTACGACCTCAAGAACCACATGCGCA Gene GeneID:614110|ZBTB7C:XM_002697761:292_cdna Constitutive 0 NULL GeneID:614110 24 GENE ZBTB7C NULL zinc finger and BTB domain containing 7C EMBV3_34076 CTCGTGGATGTGGAACCAAAGGTGAAGTCTAAGAAAAGGGAAGCTGTTGCAGGAAGAGGC Gene GeneID:508788|SNRPD1:NM_001035065:13_cdna Constitutive 0 NULL GeneID:508788 24 GENE SNRPD1 MGC128382 small nuclear ribonucleoprotein D1 polypeptide 16kDa EMBV3_10744 GCTGCTTATGGTTTTGAAGGGGTGGGGGAGGGTGGGAATTGGTAAAGAGTAGGGTATTTC Gene GeneID:615599|UBE2E1:XM_002698757:22_cdna Constitutive 1 NULL GeneID:615599 27 GENE UBE2E1 NULL ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast) EMBV3_13082 CATGGAATCTGGGAGCAGAAGTCCCAACCCCCATGAGATCACGCATCAGTTGGACCTTGG Gene GeneID:615050|FBRS:NM_001105002:410_cdna Constitutive 0 NULL GeneID:615050 25 GENE FBRS MGC142978 fibrosin EMBV3_24496 GAAGTTCTGGAAATTGAAGTGCTCAAGGTATGGTGTCAAGGAAGCTGAGCAGTCACCCGC Gene BVV0102_150473 + 0 NULL GK000003.2:16984790-17086462 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14529 TGGAGATTTTGCTGGAAACCTTCATATATGGAACCGTAAAGGTGTGGGACCCAAGGCAGA Variant GeneID:540032|WDR92:NM_001046465:65_cdna 329^459 1 EMBV3_41175 GeneID:540032 11 GENE WDR92 MGC137951 WD repeat domain 92 EMBV3_05763 TTGACAGCAACATCCCTCCTACCGCATCCTTTTCTCAGTTCCCAGTGCCTTAAGCCTTCA Gene GeneID:507466|ZC3H10:NM_001097993:962_cdna UTR3_Alt 1 NULL GeneID:507466 5 GENE ZC3H10 NULL zinc finger CCCH-type containing 10 EMBV3_02104 CCATCATGAAGAAAGGGACCCGTGTGAAAGGTATTTAACGCCACAGGCGAGCTGTCGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02961 AGAGGGTCTGCTGGAGGAGCCTAGAGGACAGTTCTACCTTCCTTTCGACGCTAGCCTTTT Gene GeneID:505554|NEU1:NM_001083642:63_cdna Constitutive 0 NULL GeneID:505554 23 GENE NEU1 NULL sialidase 1 (lysosomal sialidase) EMBV3_00900 TGGAACCAGGTGGCTCTCTCAGATGAAGGCAGTTGAAAGAGAGCTGAAGAAAGGGATGCT Gene BVV0102_029483 + 0 NULL GK000025.2:36691644-36726018 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41237 AGAGAATATACCCACTTGCATTGCGCTCCGTCCCTACCCCAAGGAAGAAGTGAGCCAGTA Gene GeneID:617088|LOC617088:NM_001035491:234_cdna Constitutive 0 NULL GeneID:617088 11 GENE LOC617088 MGC128320 hypothetical protein LOC617088 EMBV3_29678 AGTGTTCCCAGGGAGAATCACTGACAACATGGTGTGTGCGGGCGGCAAAGCTGGAGAGGA Gene GeneID:618448|KLK12:XM_002695142:683_cdna Constitutive 0 NULL GeneID:618448 18 GENE KLK12 NULL kallikrein-related peptidase 12 EMBV3_29817 CCCCAAGCACCTGTTGGCCATCGTGAGCACGCTCCTTTGGATTCTGACCTTTCTGTTAAA Gene GeneID:528031|LOC528031:XM_002699442:147_cdna Constitutive 0 NULL GeneID:528031 29 GENE LOC528031 NULL similar to Mas-related G-protein coupled receptor member B2 EMBV3_11579 TACACACACTATACTGGAGGGCTTTCATTTTTAATTCATGTTTATGAAGATTTAGAATTC Gene GeneID:510177|SF3B1:XM_002685476:179_cdna Constitutive 2 NULL GeneID:510177 2 GENE SF3B1 NULL splicing factor 3b, subunit 1, 155kDa EMBV3_13055 CAACTGGAAGAGTCATGCAATAACTTGATAGGAATCAGTTTTCATGAAATGTTTAAGTAA Gene BVV0101_003354 + 0 NULL GK000017.2:21516847-21932168 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34754 TTCGATGTCAGTTGTCCTGACAAGAATCGTTTAGGCGGACAGAACTTATCTGCAACTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39353 TCTAGAGTCCATGCCCCACAACAGAAGTCACCACAATGAGAAGCCGGAGCAGGGCAACTG Gene BVV0102_036618 + 0 NULL GK000006.2:95136950-95299039 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210252 1 XLOC_128762 NonCoding TCONS_00210252 XLOC_128762 NonCoding NonCoding - 6:95264848-95265163 - TSS157759 315 0.984126984126984 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00109000064987316 1.75685544659268e-05 0.000557575596091196 0 0 0 9.42307587749308e-05 0 5.32211122430713e-05 0 0 0 0 0.000107880207439483 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 8e-53 210 76.11 0.977777777777778 0 noncoding 0 0 0 0 -0.247536318416285 0.11076996886396 0.0094318092923291 0.847801641135956 ATTATTTATTTATTGGTTCTGCTGGGTCTTCGTTGCCGCTTGGGCCTTTCTCTGGTTGCAGCAAGGGGTACTCCTCTCCAGTTGCCCTGCTCCGGCTTCTCATTGTGGTGACTTCTGTTGTGGGGCATGGACTCTAGAGCATGCAGGCTTCAGTAGTTGGGGCACATGGGCTCTAGAGCACAGGCTCATCAACAGTTAAGGCACATAGCTTCGTTGCTCCATGACACGTGGGATCTTCCCTGATCGGGGATCAAACCCATGCCTCCTGCACTGGCAGGCAGATTCTTTACCGCTGAACCACCAGAGAAGCCCATA TCONS_00203874 . 5' 33723 TCONS_00203874 . 5' 33723 EMBV3_27568 ACACAAGGCGATGCAGCCGTGGCTTCTCCTCCCATGCCCAGATCTGTGTCTGACCCTCTT Gene GeneID:100335882|LOC100335882:XM_002698090:112_cdna Constitutive 0 NULL GeneID:100335882 25 GENE LOC100335882 NULL hypothetical protein LOC100335882 EMBV3_36724 AAATGACTATATTTTATATTATGGTGGCAAAAAAAGAAGTAATTTCAGGAAAAGGCCAGT Variant GeneID:615724|C26H10ORF4:NM_001076392:231_cdna 533^747 2 EMBV3_21140 GeneID:615724 26 GENE C26H10ORF4 MGC139562 chromosome 10 open reading frame 4 ortholog EMBV3_05355 TGTTGATGTTCCCGACCACCTTGACACCTTCCACAAGCTCCCAAGAGAAGGCAGATGGAT Gene GeneID:540837|AFTPH:XM_002691385:273_cdna Constitutive 0 NULL GeneID:540837 11 GENE AFTPH MGC151658 aftiphilin EMBV3_16289 TTAGGGGCTCTAACTACATCCAAGGATGACGCGGCAAGCACAGCTGGGGTGTTTTGGTTG Gene GeneID:282433|GUCY1B3:NM_174641:93_cdna UTR3_Alt 2 NULL GeneID:282433 17 GENE GUCY1B3 GUCY1B1 guanylate cyclase 1, soluble, beta 3 EMBV3_16715 CTTTGTGGAGCTGTATGGCCCTAGCATGCGGCCCCTGTTTGATTTCTCCTGGCTGTCTCT Gene GeneID:281020|BCL2:NM_001166486:11_cdna Constitutive 0 NULL GeneID:281020 24 GENE BCL2 NULL B-cell CLL/lymphoma 2 EMBV3_01204 GACCTCACTCGCCCCTACAGCCTCTTCTCCTACAGCACTAAATCTAAAGACAATGAGCTG Gene GeneID:504879|MPTX:NM_001034227:227_cdna Constitutive 0 NULL GeneID:504879 3 GENE MPTX MGC127236 amyloid P component-like EMBV3_26101 CGACGCCGAGCAGCAGAGACCACCTGAAAGTGTTCTGGACTTGGTGCTTCATTCTGCTAT Variant GeneID:616372|TMEM41B:NM_001099156:237_cdna 302^642 3 EMBV3_30180 GeneID:616372 15 GENE TMEM41B MGC143027 transmembrane protein 41B EMBV3_33228 GTGACACAGTACAAGAAGGGCAAGGATTCTGTGTATGCCCAGGGAAAGCGGCGTTATGAC Gene GeneID:514680|LOC514680:XM_002686659:98_cdna Constitutive 0 NULL GeneID:514680 4 GENE LOC514680 NULL similar to mCG7611 EMBV3_02626 GGTCACGCCCCGCGGCGGCCTGACCGGCAGGTCCCCCTGAGCCAGCCTCCCGAGGAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04905 GAGGTCCAGAGAGCCTCGTTCTTTGCTGCTAGTGATGAAAACCATCGGCCTCTGAGTGCT Gene GeneID:787248|SIPA1L1:XM_002690995:292_cdna UTR3_Alt 2 NULL GeneID:787248 10 GENE SIPA1L1 NULL signal-induced proliferation-associated 1 like 1 EMBV3_36235 CATTGCTGCATGATTTCTCTAGTTGCGGTGAGGGGGGCTTCTCTCTAGTTGCGGCGTGCA Gene BVT0102_133077 + 0 NULL GK000010.2:26554125-26631561 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34944 TGGGCAGAAGGCGCCAAGGCTCCCCTTCCTGTGTATTCAGAACCCATGTTTGCCAATATA Gene BVT0102_073450 + 0 NULL GK000015.2:78475426-78490883 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062440 TCONS_00062447 TCONS_00062445 TCONS_00062441 TCONS_00062448 TCONS_00062444 TCONS_00062443 TCONS_00062442 TCONS_00062446 1 XLOC_037302 Coding TCONS_00062446 XLOC_037302 Coding Coding CELF1 15:78488440-78554030 j TSS46281 4595 1 TCONS_00062446_2 482 14 0.930155971275671 0.000272022129991378 0.000643050150971937 0.000849149312837109 8.83805118055125e-05 0.000672885032398581 0.000133578162858134 1.96282274035507e-08 7.7903509287036e-08 6.65371243616947e-05 0.00105611383700772 4.35252843929026e-09 1.08790001372648e-06 0.000142713021073137 0.000435840813109912 0.000455303598658171 0.0045331102001834 0.000539772394266325 0.000983026647722536 0.000954499894059255 1.42304416548099e-11 0.000823259306730008 0.00134565805893898 0.00064726800487976 0.000236677356663108 3.72983327394486e-08 0.00020415884802655 0.00156295227766209 1.44763936932971e-07 0.000378277980805633 0.000307519221135918 XM_005216490.1 CELF1 PREDICTED: Bos taurus CUGBP, Elav-like family member 1 (CELF1), 0.0 7937 99.66 0.961915125136017 NM_198683.2 Celf1 Mus musculus CUGBP, Elav-like family member 1 (Celf1), transcript 0.0 5068 84.54 0.998694232861806 TCONS_00062446_2 sp|Q92879|CELF1_HUMAN CELF1_HUMAN CUGBP Elav-like family member 1; 0.0 881 97.53 0.99792531120332 4 coding 0 0 0 0 -0.175511387816854 0.334973146061982 -0.0513726386786592 0.729864767000399 TGGTAGGCGCCGGAAGTGCCGCCATTTTGGGGTGTTCTGCTCTGGCGGCAGCGGCGGCGGCGGCGGGACGCGGCGGCTCCCCCGGGACTCGGCCTCAGCAGCGAGGCGGCGGCGGCTGCGGAGGCGCAGGCAGCAGCTGAGGCGGCGGCAGGCTGAGGTGCAGCCGCTGCTCAAAGAAAATGAACGGCACCCTGGACCACCCAGATCAACCGGATCTTGATGCTATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAGAAGGACTTGAGGGAACTGTTTGAACAGTATGGTGCTGTCTATGAAATCAATGTCCTAAGGGATAGGAGCCAAAACCCTCCACAGAGCAAAGGGTGCTGTTTTGTTACATTTTACACCCGAAAAGCTGCATTAGAAGCTCAGAACGCTCTTCACAACATGAAGGTCCTCCCAGGGATGCATCATCCTATACAGATGAAGCCTGCCGACAGCGAGAAGAACAACGCAGTGGAAGACAGGAAGCTGTTTATCGGTATGATATCCAAGAAGTGCACTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTGGACAGATTGAAGAATGCCGGATACTGAGGGGACCTGATGGGTTGAGCCGAGGTTGTGCGTTTGTGACTTTTACAACAAGAGCCATGGCACAGACAGCTATCAAGGCAATGCACCAAGCACAGACCATGGAGGGTTGCTCCTCCCCCATGGTGGTAAAATTTGCTGATACACAGAAGGACAAAGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGCCTCTGTGTGGGGAAACCTTGCTGGTCTAAATACTCTCGGACCCCAGTATTTAGCACTCCTTCAGCAGACTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCCTCCACCCGATGGGAGGGTTAAATGCAGTGCAGTTACAGAACCTGGCTGCACTGGCTGCTGCGGCTAGTGCAGCTCAGAGCACCCCAAGTGGCACCAGTGCTCTCACCACGTCCAGCAGTCCCCTCAGCGTGCTCACCAGTTCAGGGTCCTCACCGAGCTCCAGCAGCAGCAGCTCCGTCAACCCCATCGCCTCCCTTGGAGCCCTGCAGACATTAGCTGGAGCAACAGCAGGCCTCAACGTCAGCTCTTTGGCAGGGATGGCCGCGTTAAACGGCGGCCTGGGCAGCAGCGGCCTTTCCAACGGCACCGGGAGCACCATGGAGGCCCTCACTCAGGCCTACTCGGGGATCCAGCAGTACGCCGCCGCGGCGCTCCCCACCCTGTACAACCAGAACCTGCTGGCACAGCAGAGTATCGGTGCTGCTGGGAGCCAGAAGGAAGGTCCAGAAGGAGCCAACCTGTTCATCTACCACCTGCCCCAGGAGTTCGGAGACCAGGACCTGCTGCAGATGTTCATGCCCTTTGGGAATGTCGTGTCTGCCAAGGTTTTTATAGACAAGCAGACAAACCTGAGCAAGTGTTTCGGTTTTGTAAGTTATGACAATCCTGTCTCGGCTCAAGCTGCCATCCAGTCCATGAACGGCTTTCAGATCGGCATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAAGAACGACAGCAAACCCTACTGAGCGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTCAGCTTCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGTTGACCTTTGATGCTGATGTGTATTTTTATTATGTTTGTTTCTTTCTTTGTTTTTTCTTTTTTCTTTCCTTTTTTTTTTCTTTTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTTGAATATAAAAAAATCTATTTTTCTAGAACTTCATAAGATAACCACTTGATTTTGTGATTCCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAGCCAGTCCGCTTCTAGGCTTTGTTTCTCGGTGTGTTTAGTTTTAAAGACAACTTTGGAGTAAACAATGAAATAAAAGATGTCACTAAAACCTTTGAGGCTCCTGAGCACATTTTGCTGATACAGTTTGTAGGGCTTGAGGAGACCGCATGTGTTCCTATTTTTCTTTTTTCTGAGTTCTCAACTGCAGAAAACCCCTGAGCCCTTTTTCCTTTTTGACCACCAGCTGCAGCTTGGGCCCCAGGCAGCCCCCGCCACCTGTGGCTCTGCCCTGGAGTCCCCTTGCGGGGAGTCTGCGGGGCCCCCGCCCCCAGCCCCGCCGTGCCCGCCCCCAGGCCTGTTCCTGCAGTCTCCACAGCAAAATGTGATGCTTCAAATTTTTTTTTTCTGTTTTTGTATTGTTTTTGTGTTTTTGTTTTGAATTTTTTCCTTTCCTACTAAGATTATGCCCAGAAAAACCGAGTTTGCATGTTTCCTGCTGTTTCTTCACACCTCCGTATATATCACCTTCACCTCTCTGTTTCCTATAGTTTGTGCAAAAACTGACCGATTTAAAAGGGTTTCAAAGAAGCTGTTTTAAATTGTTGTGGGGTTGATTTTTTTTTTTTTCCCAAGGTTGTATTGTTTTGTTTTGAAGTGGCAACTTTCTCCTCTCTTGCCCTTAGAGCGTTTGCCTGTGCATTTAGACTGTCTCCTCACACGGCCTCCAGGCCTTGGGGGGCCTCCGGGGGCCGGCTGCTCTGCTCAGAGACGGGTGGGAAGGGGGTCCAGAGAGGCACAGGAGCAGAGAGAGCACCCCAAGGGTGGCTGTGGGCAGCAGGAGGCTGAGTGCGCTAGGGGCCCCAGGCATTCCTCGGCCCCAGAGGCGGAGAGTGCCCTGAGCCACTCCGGCGGCCGTGCCTGCGCTGGGCGGCATGCCCCTGCCCGCGCTGCTGTGCAGCCCCGGGCCCCGCCGCCCCACTCTGGCTCTTCACTGCAGCTCTGCTCTTGCTTAGCTGCTGGGGTTGGGGTTGGGGCGGTTTTTTGTGTTTATTTTTTTAAATTGGGTGAAGAGCCAAATAGCTACTGTCCCCGGGTGCCAGGCAAGCCCCGGTCCTTGGTTCCCTGAGGGGAGCCTGCCCTCCTCTCTTGGGGCACCATCCAGCCTCAGGGTCTGCAGGGATTTGAGTGAGAAGGTGCATGGTGAAGGGCGAGGCCAGAGGAGACGTGAGGTCGCGGGGTGGGTCTGTGGAGGTCAGAGGTTGCAGGGGGCGGTGTTTGGGATAGCTTCCACCCAGGCCTGAGCGGCTGGTGGGCGAGCGAGCTGGGAAGTAGGGCTGTCCAGGGACGGGTGGAGAGGGGAGCCGGGGGCAGGGCGGGGCGGGGCAGGTCGAAGCACTGTCCGCATCATCCTCGCTGCAGGTGATGAGGAAGGGTCTCGGCAGCGTCTCTGCCCCGGGACCGGGCAGGCAGCCTAGTGTTAGCTCGGGGCGCCCCTTACCCAGAGGAGAGGGTGGCCAGGTGGAGGCCCAGTGGATGGTAGGCTGCTTCATTTCTTCAGAGGGGTGAGTGGATGGAAGGAGGCCAGGAACCCCCAGCCTGAGCGAGACCGCCGCGCACCCCACAGTCTGACTGCACAGAGCGGCCTCTGTGGGCAGAAGGCGCCAAGGCTCCCCTTCCTGTGTATTCAGAACCCATGTTTGCCAATATATTTTGCTTTCAATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAACCAAATGCCAAATGTTGGACGCTGTTTCCTTTTCCTTTTTCTCTCTCTGATTGTTTTAATTGTTTTGTGGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGCTGCTTTTTGTGAATAATTTAAAAAGAAAAAAAAAAAGAAACTTTACATTTTGGAGACAAACCTGTGTGAGTTTTTTATTGGTACAAACGTTGTATTTAACACTAGGGGTTTTGTACAGTTTTTTGCCTTTTCTACTAGAAAACAATGTAAAGTGATTTCACAATGTGAAGAGAAAAAATTGCCACTATGACCAAACGCACAGTCTGTTCTGCAGCAACAACGGGATTCAATCAACTCAAAGTCGTGATTCAGCCGTAGAAATGCTTTTTCTTTACCTTGTTTGAGCTTTTCCTTTCTTTCCTGTTTTGATTTGCAAAAGAAAATGTCTTTTTTGTGTGAACTTGTGTTGTACTATGTAGAAAATTATGGATTTTACTTTAATGGTTTAAAAAAAAAAAAAAGGCAAGAAGAGCCCCTGTCGCTTTTCTGACCTGATCACAGAGTTTGTGTAGTGGATTAAAAAAGAAAAAAAAAAATTGTTACAAGTTTGGAGCAAGGGAGTATGTGTTTAAAAGGAAATCTTCCTTTTCTGTGTGTTTTTCCTTTTGTCCCAATGGGGAACCTAAATCTGTTTTAATTGCACAGACACACGGACAAAAAGTCATTTTGTATCTGCCAAGTGTGGTACCTTCCTTTGTTTATTTGCTATTAAACTGTTTGAGAAGAACTGCC EMBV3_09276 GTGAGCAAGAGAACCACAGGCGCCGGCAACTCCCGATTCTGGAACAAGGAGTCAAGTATG Gene BVV0102_424598 - 1 EMBV3_43141 GK000029.2:44679320-44691681 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29172 CTCTGATGTGGGCTGCAAAGACACTCCAAAGTACAGCGTGAAAAGTGAGGGAAGGCAACT Gene BVT0102_108097 - 1 EMBV3_10481 GK000018.2:49897364-49902541 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20360 TGTTGCTCCGACCCGGACCCCAGCACCAAGACTACTCCAGAAACTTGATTTCCCCACTAT Variant GeneID:540335|GLO1:NM_001083496:15_cdna 129^211 1 EMBV3_21643 GeneID:540335 23 GENE GLO1 MGC139859 glyoxalase I EMBV3_09793 GATCTTCACTGCAAATTCTATCAGTTGGAGAGACTCATGCAGGAGCAGTTACCGGACCTG Gene BVT0102_032117 + 0 NULL GK000016.2:57214301-57525148 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067725 TCONS_00067724 TCONS_00067726 1 XLOC_041532 Coding TCONS_00067725 XLOC_041532 Coding Coding RABGAP1L 16:57110134-57652020 j TSS50860 1228 1 TCONS_00067725_4 213 10 0.997752290615167 0.00678459547729389 0.00368486919056825 0.00754382576229307 0.00678608473327466 0.00344920746678677 0.00112966973343325 0.00563671041198579 0.00775574570480476 0.00940513395640623 0.000576277926454372 6.44477747735506e-05 0.000168997209511137 0.00245073227530641 0.0008285898450413 0.00222398991494654 0.00226383833346977 0.00140818828872457 0.0039423922207098 0.00954346349678935 0.00384125865250282 0.0017274402418139 0.000703147941911878 0.000179271091569759 0.00184813803129318 0.00811811043534504 0.00897286230784643 0.00225514110370972 0.000222607842585795 0.000213244469270747 0.000572875937296731 XM_005213132.1 RABGAP1 PREDICTED: Bos taurus RAB GTPase activating protein 1 (RABGAP1), 6e-125 452 73.79 0.58957654723127 NM_014857.4 RABGAP1L Homo sapiens RAB GTPase activating protein 1-like (RABGAP1L), 0.0 1377 94.28 0.724755700325733 TCONS_00067725_4 sp|Q5R372|RBG1L_HUMAN RBG1L_HUMAN Rab GTPase-activating protein 1-like; 3e-134 400 81.64 0.995305164319249 1 coding 0 0 1 0 -0.0561963131286415 0.733630383593299 -0.110878538639574 0.0707686320588497 TCAGTCTGAGGGAAAAGGCCATACCAATGCTGGGGATGCAATATATGAGGTGGTGAGTCTACAGCGAGAGTCTGAGAAGGAGGATCCAGTCACTCCTACTAGTGGAGGGGGCCCATTGTCACCCCAGGAGGATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCCTGAGAAGATCCTATATTCTTGGGGAGAATTGCTAGGAAGATGGCACAGTAACCTTGGTGCACGACCAAAGGGATTGTCCACTCTGGTGAAGAGTGGTGTTCCTGAAGCATTGAGAGCAGAGGTATGGCAATTATTAGCAGGCTGCCATGACAACCAAGCGATGCTGGATAGGTACCGACTTCTTATCACAAAGGACTCAGCCCAGGAGAGTGTTATTACTCGAGATATTCATCGTACATTTCCTGCACACGATTACTTCAAAGATACTGGAGGAGATGGCCAAGAATCTCTCTACAAGATCTGCAAGGCCTACTCTGTCTATGACGAAGACATTGGGTACTGTCAAGGACAGTCTTTTCTTGCTGCTGTATTGCTGCTGCATATGCCAGAAGAACAAGCATTCTGTGTTTTGGTGAAAATCATGTATGACTATGGTTTACGAGACCTCTACAAAAACAACTTTGAAGATCTTCACTGCAAATTCTATCAGTTGGAGAGACTCATGCAGGAGCAGTTACCGGACCTGCACAACCATTTTTCTGATCTGAACCTAGAAGCTCATATGTACGCATCCCAGTGGTTTCTCACTCTTTTCACTGCCAAGTTCCCACTCTGCATGGTCTTCCACATCATTGACTTACTGCTTTCTGAGGGTTTGAACATAATCTTTCATGTAGCCTTGGCTCTCCTAAAGGTACCAACCAAGAAGCTAAAGAAATATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAGCAGGAAGACCCAATGGATAGATACAAGTTTGTATATTTGTAGGTGACTTCACCTGTTGCATTTATACTGGGAGTCTTCATAAGAAGCTGAAAGAAAGGGAAAAAGAAAAGAGAGAAAGTGGCTATCAACTACTTTCAAAAATGAGAAAAAAGAAAAATGGCAAAGTATGGTTTTAGCTGTGCACGGTACATCCACAAAGACTGTTAGAAGGCGAACTGTTCCAAGACTGGCCCGATAACGTTTCAGACTCACCCCTGTCTGGAGCCAATG EMBV3_19743 TGATCAGCAAATTGAAGCTCCCCAACAATGGGAGGGTGCGTGGTGGAAGAGGTTTACCCA Gene GeneID:531775|LOC531775:XM_002700283:2_cdna Constitutive 0 NULL GeneID:531775 X GENE LOC531775 NULL similar to melanoma antigen 2 EMBV3_26456 TCATGTTGACGAGCCAGGATAAAACTCCTGCCGTGATCCAGAGGGCGATGTTGAAGCACA Gene GeneID:522344|RGL1:XM_002694211:61_cdna UTR3_Alt 2 NULL GeneID:522344 16 GENE RGL1 NULL ral guanine nucleotide dissociation stimulator-like 1 EMBV3_19069 GCACTGTTGACCCTGTTTTTGTGCCCTGCAGACTTGTATTTGGGCTGCTATTCTGCCCAT Gene BVT0102_060096 - 0 NULL GK000010.2:102300272-102523970 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015511 1 XLOC_008500 NonCoding TCONS_00015511 XLOC_008500 NonCoding NonCoding - 10:102342733-102346615 - TSS10934 1147 2 TCONS_00015511_4 73 0.133391455972101 3 0.705230610667354 5.3636741359534e-20 3.0077003660718e-12 0.000629523321491635 6.91724312525123e-05 1.85038215678545e-19 1.11605422327727e-18 0.000298316520493487 1.12211941537692e-12 2.47300355673344e-05 2.35886295413351e-12 0.000488730930886787 0 7.75958871849792e-11 0 1.07410959378633e-19 0 0 0 0.000743623208287871 0.000190143309976657 0.000467595350111793 0 0 0 1.12907936059999e-17 0.000116707320589147 0.000178785630775563 7.53562162840179e-05 2.2407026697578e-17 4.2371721679911e-15 XM_005200861.1 GYG2 PREDICTED: Bos taurus glycogenin 2 (GYG2), transcript variant X1, 3e-52 210 90.26 0.133391455972101 0 noncoding TGAGTCTGAAGCCAGAATGTGGTCTGGGCCTCGCTGATGAGACGCAGGAGATGGCCATGAACAGACTTGCTCCAAATGGCACCGATTATTTATGGGCAGAATAGCAGCCCAAATAAAAGTCTGCAGGGCACAAAAACAGGGTCAACAGTGCGCAGACTCGGCAGAAACCACGAGACTGCGTCTGCAAGGACAGATAGAGGTTAAGGCATGAGCAAATGTGAGCAGAAGCAGGACTTCACGGAGGGGGCATCGCAGGTGACAGCACTAAATCACTACTGTGAATCCACGCTCATCGAAAGGCATGAAGGAACCTCGCTTTGCTGTGTTCATCGCTGATGCTGGTCACACTTATTCCTTAACCGACCCAATCAGGCCATTTGCAGATGGCCCCCCAGTAGTGGAAGAGGGCTGGTGTTCCCTTCTCTCCAGAGCCAGTTACAGAACCGGCTGCAACCTGTGTCCTCAGACCCATCTTCCCCGGCTCTGGCTCCGTCCTTTAGGAGTGATTTATCCTGGGGTCTGACTCCCGAGCAGAGCCGCAGTGTCGGCCTTGAAGGAAAGCCAGACGCAGCCCGGCCTGGCTCTGGGCCAGCCAGCTGGCGGCGGAGCTGCGGGCTCTTGGGGTCCCCCGGCCCCCCTTTCAGCTGTCTCGCCCAGGTGATCATCCACGCTGCCGCTCCCTGGCTCTTTCTAGCCCCTCATTTCAGATCACTTTACACACGTTAATTAAGCCTTGAAACACTCAGGAAAGAAAATCGAAGCGCTAACTGGGATGTCAGCCACGCCCCTCCCCAGTCAGGAGGAAGAAGGAGCTGGTAAAGCACGGGGTTGGGATGAACCGGTTCCACAAGAGGCAGGAAACCCCGTTCACTTCAAATTCACCAGTCAGCGTCACAGAACAACCTCCCACCTCATGGTCCCCCATCACGGTTGATCCTGGTGACCATCGGAAGGCGGGTTCCCCTGGGCAAGACTGCTGACTGAGAGGCAGCATCCATCCTAAAGGAAATCAACCCTGAATGTTCACTGGAAGGACTGATGCTGAAGCTGGAGCTCCAATGCTTTGGACACCTGATGCGAAGAGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGACTGAAGGCGGGAAGAGAAGGGGATGAC TCONS_00018540 r 5' 2829 TCONS_00018540 r 5' 2829 EMBV3_05981 CCCCAGTCAGGCCGATCCGCTCCGCTCACGATAATTCAAAAATGGCAGAGCTCTTTATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35622 GGCCCAGCAGGCTACAAGTGGGAACAACACTGATACAAGGGAAGCCAAGCACTAAACTAT Gene BVT0102_051220 - 1 EMBV3_39748 GK000015.2:44530713-44552623 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22625 CCGCGCGGGACATAGTCCCGCTCCCGACCGCTGTATTCCTCGGCACTTGTGGAATGTGAG Variant GeneID:513331|PHF11:NM_001046144:97_cdna 302^423 2 EMBV3_22892 GeneID:513331 12 GENE PHF11 MGC137849 PHD finger protein 11 EMBV3_13682 ATTCGAAGAGCCAGTAACGGAGAACCCCTCGAAAAGATCACCAACAGCCGCCCTCCTTGT Gene GeneID:505710|C19H17orf37:NM_001075221:76_cdna Constitutive 1 NULL GeneID:505710 19 GENE C19H17orf37 C17orf37 MGC142432 chromosome 17 open reading frame 37 ortholog EMBV3_23136 CCCACTGTCCCAGGGATGTCATTTTTTGGTGTTGATTTGTTTTTAAACCCAGGCTCAACC Gene GeneID:535676|PPIL4:XM_002690318:11_cdna UTR3_Alt 2 NULL GeneID:535676 9 GENE PPIL4 NULL peptidylprolyl isomerase (cyclophilin)-like 4 EMBV3_20456 GTGTGGCTCGTTACTCACAGTATAAAACCAATATAATTTTTTTATCATCTTATATCCTGT Variant GeneID:615191|PTPLA:XM_002692104:322_cdna 520^641 1 EMBV3_24811 GeneID:615191 13 GENE PTPLA NULL protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A EMBV3_36733 GTCTGAGAAGTCAGAGGGGCATGAAAACAAGACAAATACCGCTCGTCTCTCCAGTTCAGC Gene BVV0102_273054 + 0 NULL GK000012.2:16183982-16184643 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22127 ACGAAACAAACTGGCAGCAGCGAAGTGTAGGAACCGGCGAAGGGAGCTGACTGACCGACT Gene GeneID:540819|FOSB:NM_001102248:370_cdna UTR3_Alt 2 NULL GeneID:540819 18 GENE FOSB MGC143206 FBJ murine osteosarcoma viral oncogene homolog B EMBV3_30538 GCAACTGTGTACACCCCTCAATTAAAGCTTTGCCTGTGTTCACGATCTTCACTTCTGCCC Gene BVV0102_040582 + 1 EMBV3_15472 GK000016.2:23175860-23350278 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03183 TATTGCACTCGTGGTGTTTTTCACCGCCTTCTTAACGCCGCGTGGGTACGTGCTGAGCAA Gene GeneID:100300759|LOC100300759:XM_002696757:411_cdna Constitutive 0 NULL GeneID:100300759 21 GENE LOC100300759 NULL hypothetical protein LOC100300759 EMBV3_23604 AGAGCCCAGTGATGTTGGGAACTGAGTTTGGGGGCGGTATGTTGGTAAAGAATTATGGCC Gene GeneID:615236|CNIH3:XM_002693997:290_cdna Constitutive 0 NULL GeneID:615236 16 GENE CNIH3 NULL cornichon homolog 3 (Drosophila) EMBV3_31471 ATGATCCTGGGTTACTGGGACATCCGCGGGCTCCCGACTATGACAGAAGCCAGTGGCTGA Variant GeneID:327709|GSTM1:NM_175825:41_cdna 101^176 1 EMBV3_31896 GeneID:327709 3 GENE GSTM1 NULL glutathione S-transferase M1 EMBV3_40681 GGGTGAAATGGGTGAAGGTAGTCAAAGGTACAGACTTCCGGTTATAAGATAATTCCTGGG Gene BVV0102_069928 + 0 NULL GK000010.2:64626078-65039281 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08196 CTACACCACCTTCGGGCAGAGTCCAGACGGCTGTTCCACCGTCATGTTCCCGAAGATTAT Gene GeneID:539013|CDYL:NM_001102223:229_cdna UTR3_Alt 2 NULL GeneID:539013 23 GENE CDYL MGC148813 chromodomain protein, Y-like EMBV3_12586 CTCTCATCTGAAGCCTCACATACTGCCAGGAGCTTTAACATCTGCATGTTTTCTCTCGTG Gene GeneID:100298793|LOC100298793:XM_002686359:51_cdna Constitutive 0 NULL GeneID:100298793 3 GENE LOC100298793 NULL similar to cytochrome P450, family 2, subfamily J, polypeptide 2 EMBV3_24858 ACCTGAGAAAGTTAAATGGTAAAGAACTGAAGAAAATTTAAGACTTGCTCTATAAGCTTG Gene GeneID:539837|ALG10:NM_001076189:23_cdna Constitutive 2 NULL GeneID:539837 5 GENE ALG10 ALG10B MGC139886 asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe) EMBV3_22168 CAACTATAGAAGATCTTATAGTCCTAGAAAACCAAACTGCAGCTGGAATACCCAGTACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09015 GTCCTGGATCAGGGATTGAACCTGTGTCCCCTGCGTTGGCAGTCGGATTCTGTAACCACT Gene BVV0102_115479 - 1 EMBV3_37155 GK000029.2:28892894-28903055 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164917 TCONS_00164916 1 XLOC_100360 Coding TCONS_00164916 XLOC_100360 Coding Coding TMEM218 29:28901251-28918088 j TSS123287 966 2 TCONS_00164916_2 133 0.246376811594203 6 0.942979330007128 2.78656938869159e-05 4.39802672999862e-32 7.93145514892842e-05 1.09298038693817e-21 0 4.4460508792944e-17 0 0 5.68858796772885e-20 4.2581664915885e-06 2.49060543741612e-13 0.000102742964785945 4.91430290011132e-14 0 0.000264187639598581 0.00124754801679396 0.00103119796684764 0.00713472540083222 0.000756382940652423 0 0 1.11514461261902e-25 0 0.000287177638615974 3.27699450830926e-44 2.34113463767749e-16 1.52548662092552e-08 0.000127417970297723 4.77251460163169e-09 6.68046656739453e-10 XR_240623.1 TMEM218 PREDICTED: Bos taurus transmembrane protein 218 (TMEM218), 0.0 1031 100.00 0.590062111801242 XM_005271434.1 TMEM218 PREDICTED: Homo sapiens transmembrane protein 218 (TMEM218), 5e-112 408 81.75 0.432712215320911 TCONS_00164916_1 sp|A5PJF4|TM218_BOVIN TM218_BOVIN Transmembrane protein 218; 4e-73 217 100.00 0.991304347826087 0 coding 0 0 0 0 -0.0239933251198886 0.820815880664114 0.00831685820551804 0.877260682709813 AGACCCAAGCCTCTGTGGGCTGAAACTGGCTGGGCTGAGAGTGTGGGACCCGGGAGATGCGAAGCCAGGAAACCCAGGAACACCCAGAAGCCCAGCAGCACCCCTAACAGCAGGACCAGCTCATCGCACTGTGCCCAGTGCTCAGCCGCACCCCCCGCATGGCTGGCACGGTGCTTGGCGTAGGGGCCGGCGTGTTCGTCCTCGCCCTGCTCTGGGTGTCGGTGCTGCTGCTGTGTGCCCTGCTGTTCAGAGCCTCGGGGGCAGCTAGGTTCTCTGTCATTTTCGTGTTCCTCGGTGCTCTGATCGTCACAGCCATTCTGTTGCTCTTCCCTCGAGCCAGTGACGCCCCAGCCCCCGAGGCAGAGACGAAGATTGTAGATGCCTTTTTCATTGGCCGCTATGTCCTGCTGGCTTTCCTCACTGCCGTCTTCCTTGGAAGCCTTTTCTTGGTTCTAATCCATCACATCCTGGAGCCAATCTATGCCAAACCACTGCGGTCCTACTGAGCCGCCTTCGGGAAAACCAAGACCTTGTTCTCCCTCTCGCTTTGATGTCACTGGTGAGCAGCAAGCATAGCCTCTTAAAATTGTATCCTGACAAAGACCACATCAGCACATTACCCCGCACTGATCCACTAGATGGCGCTGTCTCAAGCTGGCAGAACACACCAGTTGAACGATTTTGTTTTGCTTTGATTTGCATCGATGGGTCCAGCAACGTGCTGTGGGGACGTCCCTGGTGGCCCAGTGGTTACAGAATCCGACTGCCAACGCAGGGGACACAGGTTCAATCCCTGATCCAGGACGATCCCACATGCCGCGGAGCAGCCGAGCCCACGTGCCACTCAGTTGGCCCGTGTGCCACTGCTGACGCCACTGCAACGAGAAGTCCTGGTACCCCAACAAAGAGTAGCCCCCACTCAGCAACAAAGACTCGGCACAACCAAAAATAAATAAAAATACAAAA EMBV3_40627 GGCACAGATAGCCCCGCCGCGCGAGACTGCAGCCTGGCTGACTACGCTTTCACCAGCTAC Variant GeneID:100301247|LOC100301247:XM_002696329:13_cdna 309^872 1 EMBV3_03800 GeneID:100301247 20 GENE LOC100301247 NULL similar to cyclin A1 EMBV3_33410 CCGAACTCTAGCTTCACGGGGTGACTTGAACATTCCGGGGCTCAGCGAACAGTGTATATT Gene GeneID:282102|TRPC4:NM_174478:20_cdna Constitutive 0 NULL GeneID:282102 12 GENE TRPC4 NULL transient receptor potential cation channel, subfamily C, member 4 EMBV3_14215 GCAAATATACCCCCAACAGACAATTAACTGTTGTTAGGTTTAGGTTTAAGTTACTTTCCC Gene GeneID:514599|GRPEL2:NM_001075674:58_cdna Constitutive 1 NULL GeneID:514599 7 GENE GRPEL2 MGC137946 GrpE-like 2, mitochondrial (E. coli) EMBV3_02525 TTCCTGGAGTCGGCCGGCTGGGACCTGCAGCGATAATAGGGTGACATCCTTCAGAGACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10709 CACCGCCAGAAGCAGCTACACTAACCCCAGCCTCTGAGTACCACAGAATCATCTCACTTT Gene BVT0102_013231 + 1 EMBV3_38116 GK000015.2:44158852-44175365 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059184 TCONS_00059187 TCONS_00059189 TCONS_00059186 TCONS_00059191 TCONS_00059185 TCONS_00059182 TCONS_00059178 TCONS_00059183 TCONS_00059190 TCONS_00059188 TCONS_00059192 1 XLOC_036278 Coding TCONS_00059187 XLOC_036278 Coding Coding SCUBE2 15:44090650-44159802 = TSS44435 4114 1 TCONS_00059187_11 970 22 0.940825150757039 5.33329396024975e-31 2.59768319621091e-09 1.11012777111897e-41 3.64205405791947e-05 3.1025085377507e-40 3.24983002985285e-26 2.91719815627945e-11 2.84805359277237e-11 2.75716156046844e-14 1.22497788842591e-35 3.01127435214128e-12 1.96700710727531e-82 1.33108359545752e-14 2.45090971947719e-11 2.57532252797495e-11 6.27207298686866e-35 0.00116263088275292 0.00180432178500154 6.6189678236296e-38 7.52979310245112e-57 1.19215059508671e-27 9.37879213989041e-19 1.81095065970579e-12 8.60568943927224e-28 1.17335509997518e-34 3.56136968632042e-22 5.24549774777011e-35 9.55123928984765e-62 1.15875431417552e-14 3.11731716762675e-15 XM_608409.6 SCUBE2 PREDICTED: Bos taurus signal peptide, CUB domain, EGF-like 2 (SCUBE2), transcript variant X2, mRNA. 0.0 5705 100.00 0.768595041322314 NM_020974.2 SCUBE2 Homo sapiens signal peptide, CUB domain, EGF-like 2 (SCUBE2), 0.0 4819 85.87 0.996596985901799 TCONS_00059187_11 sp|Q9NQ36|SCUB2_HUMAN SCUB2_HUMAN Signal peptide, CUB and EGF-like domain-containing protein 2; 0.0 1699 83.27 0.998969072164948 0 coding 1 1 1 1 0.0707319494032161 0.540024818840644 -0.0335045692917758 0.681929124230138 CGGGCAGAGCGCCCGCACACACCTCCCGGAGCCGCCGCCGCGCTCGCCGCCCGCGCTCCCCTGCCTCTGCCCGCAGCCGCCGCGCCTGCCATGGGGGTCGCGGGCCGCGGCTGCCCTAGGGCTGCCCCGGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGACGGCGGCCGTCCCGCCCTATCGGGGCCGCGCAGAGGGGCCGCCGGAGGATGTGGACGAGTGTGCCCAGGGGCTAGATGACTGCCATATCAATGCCCTGTGTGAGAACACACCCACCTCCTACAAGTGCTCCTGCAGGCCTGGCTACCAAGGGGAGGGCAGGCAGTGTGAGGATATTGATGAATGTGAAAATGAACTCAATGGAGGCTGTGTCCATGACTGTTTGAATATTCCTGGCAATTATCGCTGCACTTGTTTCGATGGCTTCATGCTGGCTCATGATGGTCATAATTGTCTCGACGTGGACGAGTGCCTGGAGAACAATGGCGGCTGCCAGCACACCTGCCTCAACGTCATGGGGAGCTACGAGTGCCGCTGCCAGGAGGGCTTTTTCCTGAGTGACAATCAGCACACGTGCATTCACCGCTCAGAAGAGGGTCTGAGCTGCATGAATAAGAATCACGGCTGTAGTCACATCTGCATGGAGGCCCCGAAGGGCAGTGTCGCCTGCGAGTGCAGGCCAGGCTTTGAGCTGGCCAAGAACCAGAGAGACTGCATCTTGACCTGTAACCATGGAAACGGTGGATGCCAGCACTCCTGTGAAGACACCGCTGAAGGCCCAGAGTGTAGCTGCCATCCTCGGTACAAGATGCACTCGGATGGGAGGAGCTGCCTCGAGCGAGAGGACATTGCCCTGGAGGTGATGGAGAGCAACACCACGTCCGTGGCAGATGGGGATAAACGGGTGAAACGGCGGCTGCTCATGGAAACGTGTGCTGTCAACAATGGAGGCTGTGACCGCACCTGCAAGGATACTTCAACAGGGGTTCATTGCAGTTGTCCCGTCGGCTTCACGCTCCAGATGGATGGAAAGACCTGTAAAGATATTGATGAGTGCCAGACGCGCAACGGAGGGTGTGATCATTTCTGCAGAAACACCGTGGGCAGTTTTGACTGCAGCTGCAAAAAGGGATTTAAATTATTAACAGATGAGAAGTCTTGCCAAGATGTGGATGAATGCTCTCTGGATAGGACCTGTGACCACAGCTGCATCAACCACCCGGGCACCTTCACATGTGCTTGCAGCGAAGGGTACACCCTCTATGGCTTTACCCACTGCGGAGACACCAACGAGTGCAGCGTCAACAACGGAGGCTGTCAGCAGGTCTGTGTGAACACTGTGGGCAGCTACGAATGCCACTGCCACTCTGGGTACAAGCTCCACTGGAATAAAAAGGACTGTGTGGAAGTGAAGGGGGGCCTGCCCACTAGCCTGTCACCCCACGTGTCCCTGCAGTGCGGTAAAAGTGGTGGAGGAGACAGGTGCTTCCTCAGATGTCACTCTGGCATTCACCTCTCTCCAGGACTGCAAGAGGCCTATTCTGTCACCTGCGGCTCTTCCTCTCCTCTCAGGAACAAACAGCAAAAATCAAATGACTCCGCTTTCGGGGATGTCGCCACCGTCAGGACAAGTGTAACCTTTAAGCTAAATGAAGGCAAATGTAGTTTGAAAAAGGCTGAGCTGTTTCCTGAGGGTCTGCGACCAGTCCTCCCAGAGAAGCACAGCTCAGTAAAAGAGAGCTTCCGCTACGCAAACCTTACATGCAGCTCTGGCAAGCAAGTCCCAGGAGGCCCTGGCCGACCGAACGCCCCTAAGGAAATGTTTATCACTGTTGAGTTTGAGCTTGAAACTAACCAAAAGGAGGTGACAGTGTCTTGTGATCTCAGTTGCATTGTAAAGCGAACAGAGAAGCGGCTCCGGAAGGCCATCCGCACTCTCCGAAAGGCTGCCCACAGGGAGCAGCTGCACCTCCAGCTCTCAGGCGTGAACCTTGAAGTGGCTAAAAAGTCTCCCCGAACATCTGAACGCCAGATAGAGTCCTGTGCAATGGGCCAGGACCATGGAGGAAACCAGTGTGGTCTGTGCCAACCAGGTGAATACTCTGCAGATGGCTTCACACCCTGCCAGCCTTGTGCCCGGGGCACATTCCAGCCTGAAGCCGGCCGCACTTCCTGCTTTCCCTGTGGAGGGGGCCTCCCCACCAAACACCCTGGAGCCACTTCCTTTCAGGACTGTGAAACCAGAGTTCAGTGTTCACCTGGACATTTCTACAACACCACTACTCACCGATGCATTCGTTGCCCAGCAGGAACATACCAGCCAGAATTTGGAAAAAATCATTGTGTTTCCTGCCCAGGAAATACCACGACTGACTTTGATGGCTCCACAAACATAACCCAGTGTAAAAACAGAAGATGCGGAGGGGAGCTGGGTGATTTCACCGGGTACATCGAATCCCCAAACTACCCAGGCAATTACCCAGCCAACACAGAATGTACCTGGACCATCAATCCACCCCCTAAGCGCCGCATCTTGATTGTGGTCCCTGAGATCTTCCTGCCCATAGAGGACGACTGTGGCGACTACCTCGTGATGCGGAAAACTGCTTCATCCAATTCTGTGACAACATATGAAACCTGCCAGACCTACGAACGCCCCATCGCCTTCACCTCCAGATCCAAGAGGCTGTGGATTCAGTTTAAGTCCAATGAGGGGAACAGCGCCAGAGGGTTCCAGGTCCCATACGTGACATACGATGAGGACTACCAGGAGCTCATTGAAGACATAGTTCGAGACGGCAGGCTCTATGCATCTGAGAACCATCAGGAAATACTTAAGGATAAGAAACTGATCAAGGCCCTGTTTGATGTCCTGGCCCACCCCCAGAACTATTTCAAGTACACAGCCCAGGAGTCCCGCGAAATGTTTCCACGATCCTTCATCCGATTGCTCCGTTCCAAAGTGTCCAGGTTTTTGAGGCCTTACAAATAAGACTGCCCACGTGCCACTTGACACAGTGTTCGGCCTGTGGGCTGGCAGGACATGGCCATCTGCTTCTGCAGCCAGCATAGATGGATAACGCTGCCTCTAGTAGCAGTGACTGGTTAGAGTTCAATTTTTATAGATAATACAGGTATTTTGGTAAATTGAACTTGGTTTTTCTTTCCCAGTGTTATAGGTGTGGACAGAGAATGGGTTTGAGTCTTACCCGCTTCTCAATGGTGTGGGCAGCCGACTTGGGTACATCAAGGGCTGGCTGAGCTGGGTTTCAGTCAGCTTAGGTGAGACTCACCTGTCCTTCTCGGTCCTCACTTCTCCTCGAGGGGGCTGCCTTGTCTGAAACTTCAGCTTCTTCCAGCATAGCCCTCCCTAAGGGAGCCCTTTATACTCGGGTGTTGGCTCTGACCAGGCAGAGCAGGAAAGCGGGGAGGAAGGGAAGGGGAGTCCTCCAGACACCGTCCACCTCCCCCCGATCCGAGACCTGGGAGGACCCGGTTTTCTCCACAGCCTTCTCCGGTCTGTGTGACTTAAATTTGATCCCAGCAGCTTGGATTCCAAGCAGTGATCACCAAAAAATACTTAAAGCAGAAAGAATTAGAAATAAGAAGGTAGAAACTCAGCACTTCCACAGACATCATAATGTGGACCTGTTGATGACCTTCCATGTTGCCAGTTTCCATCTCGTAGCAAATGCTCTGTGCTTGTCTTACACCTGCAGCTGTGCCTTCAGGGCACTGCTCTTCTGGGCACCGAGGTAGGGCCTGGACAGTTCAGATCCGATGTGATCTGATGGATGTGACTCCATCCATCATGAAAAGGAGATTCCCACACCCTGAGTCAGTACCACCAAGGGTCCTCCTTCCAGCTGGGCTTCCCACCATGGGGCGGTGGAGGTCCAGGTGGAGGTGGTATGGCCCGGCCTGTCATGCTTGCCTTCCTTCCCCCGCTCCAAGCTCAGAGACTGACTGAGGGCCTGAGCTGCACGGCTCAGGGTGGCCTCACTCCCTTAATGGTCACACCACCGCCAGAAGCAGCTACACTAACCCCAGCCTCTGAGTACCACAGAATCATCTCACTTTCAGTCAACACAGTGGGACCTCAG EMBV3_03903 TCTTCGGCCCCTTCGTGGCTCACCCGCAGAGCCGAGGATGGCAACCCCTTCTGGGCAGAG Variant GeneID:399681|EMD:NM_203361:31_cdna 695^826 3 EMBV3_00982 GeneID:399681 X GENE EMD MGC128971 emerin EMBV3_40088 GTCTGCATCCTGGCATTTCCCATGTACCTGCTGGACTTTCTTGGCTTGTGGAACTGGATA Gene GeneID:781401|LOC781401:XR_083672:212_cdna Constitutive 0 NULL GeneID:781401 5 PSEUDO LOC781401 NULL similar to Methyltransferase-like protein 7A precursor (Protein AAM-B) EMBV3_07127 CCCAGAAGATAGTGTTTCCATATTCCTACAGCCGAAGCAGAAGCAAAGACCACGAGGAGC Gene GeneID:508222|CPB2:NM_001045997:61_cdna Constitutive 1 NULL GeneID:508222 12 GENE CPB2 MGC137155 TAFI carboxypeptidase B2 (plasma) EMBV3_19227 CTGGAACAACGTCTTCTACATGCTCATCGCTGCCGACGTCCTGGCCTGCTTGCTCCTCTG Gene GeneID:506687|SLC37A2:NM_001024486:5_cdna UTR3_Alt 2 NULL GeneID:506687 29 GENE SLC37A2 NULL solute carrier family 37 (glycerol-3-phosphate transporter), member 2 EMBV3_06617 GCAGTACGCCGAGTCCTTCGTGGATAACGGCTACGATGACCTGGAGGTGTGCAAGCAGAT Gene GeneID:617270|SAMD5:XM_002690311:4_cdna Constitutive 0 NULL GeneID:617270 9 GENE SAMD5 NULL sterile alpha motif domain containing 5 EMBV3_13512 TCATAGACGACCAAACCGAAACCATTGGAAAATTAAAAGAGTGTTTACAGGAAAGAGAGG Gene BVT0101_007203 + 0 NULL GK000014.2:79796817-79816775 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054017 TCONS_00054004 TCONS_00054000 TCONS_00054002 TCONS_00053998 TCONS_00054016 TCONS_00054015 TCONS_00054006 TCONS_00054003 TCONS_00054013 TCONS_00054009 TCONS_00054010 TCONS_00054011 TCONS_00054008 TCONS_00054007 TCONS_00054005 TCONS_00054001 TCONS_00053999 TCONS_00054012 TCONS_00054014 1 XLOC_031880 Coding TCONS_00054017 XLOC_031880 Coding Coding LRRCC1 14:79804531-79848868 = TSS39725 3853 1 TCONS_00054017_3 1027 19 0.913523998556478 0.00348805695858442 0.00559408665624964 0.00247524909077413 0.00292478339397066 0.00141311561287314 0.00144392089195132 0.0030340424186583 0.00283289333892709 0.00472459069752104 0.00133419914739601 0.000982928001711012 0.00220098638399389 0.00100501782683256 0.00155225034698412 0.00135361363013228 0.00663330255898061 0.0032357402109691 0.00749405454648005 0.00301283228183742 0.00328201559703769 0.000685431733102513 0.00361137885138965 0.00223483493648134 0.00243637739068675 0.00315117167191881 0.00286227072635017 0.00256947770379559 0.000950386873481048 0.000271186772181941 0.000575203957163997 NM_001206791.1 LRRCC1 Bos taurus leucine rich repeat and coiled-coil domain containing 1 (LRRCC1), mRNA. 0.0 6920 99.87 0.99974046197768 NM_033402.4 LRRCC1 Homo sapiens leucine rich repeat and coiled-coil centrosomal protein 1 (LRRCC1), mRNA. 0.0 4322 86.19 0.948871009602907 TCONS_00054017_3 sp|Q9C099|LRCC1_HUMAN LRCC1_HUMAN Leucine-rich repeat and coiled-coil domain-containing protein 1; 0.0 1680 83.30 0.989289191820837 3 coding 1 1 0 0 0.0704014530708667 0.645507026602132 -0.0498970928252648 0.473332097888709 TGGGCTTTCAGGCCCTGCGCTGGGCGCCGGTTACGATCCCGCTCCCCGTCTCCGGTGCCATGGAGGCACCGGGGGAGGCGGAAGTCGAGAATGAGGACGGCGACAGCAACTGCGGGGATTTGTGCTTCATGGACAAAGGCCTGCGGAGCATTTCAGAGTTATCTTTAGATTCAGCTCTTCATGCCATCAATCTTCATTGCAATAACATCTCGAAGATCACATCCATTGATCACGTTTGGAATTTACAACATTTAGATCTGTCATCTAATCAAATAAGTCAAATTGAAGGACTAAACACACTGACAAAACTATGCACTTTAAATTTGTCCTGCAATTTGATCACAAGAATAGAAGGTCTTGAAGCACTAAGTAATCTGACTAGACTGAATTTATCTTACAACCACATAAATGATCTTAGTGGTTTGATGCCTCTTCATGGAATTAAACATAAACTTAGATATATTGACCTGCACAGTAACTGTATCGACAGTATCCATCACCTACTTCAGTGTACGGTAGGATTACACTTCTTGACTAATCTTATTTTGGAAAAAAATGGAGAGGATAATCCTGTCTGTCATTTACCAGGATACAGAGCAGTTATGCTCCAGACTTTGCCACAGCTCAGAATCCTAGATTGTAAGAACATATTTGGTGAGCCAATAAATATGGCAGAAATAAACTCATCGCACCTACAGTGCTTCGAAGGTCTTTTGGATAATTTAGTTTCTTCTGAGTCTCCCCTAAATATAAGTGAAGATGAGATCACTGATGGGATGCCAGTGGCGCCCCCCGTCGGCGACACAGTGCCCTTGGATCAGTTTCCAAGCACACCGACAGACACCGGTTTGACATCGCTCATGTCTGTGTGTCCCTCTTCTGAGCCAGAGAAAGTGAATCATGAAAATGATCTTCAGAATGAGATGAAACTGCAGAAATTAGATGATCAAATTTTACAGCTTCTCAGTGAAACTTCTAATTCTATAATAGATAATGTTCCTGAGAAAGATCCCAGACCAAAAAGAGACACAGATGTGACTTCTGAAAGTGACTATGGAAACAGAAAAGAATGTAGTAAGAAAACTTCTCGAAGATCAAAAATCCCCTATTATTCCAAAACTATTCAGACTATTAAACACCACAGTAAAAACAGCAGTACTTTTATAAGTTGTAATCGTAAAATGAAACCACCTTTCCTTAAAGAATTATATATAAGTTCGTCTTTGCCAAACAATAGTACATTAGAAGAATCAGAAAACCAGAAGACTGAAATAATGAAAGTAAACAATGATTGTCCAGAAGATGCCACTTACCGGGCACTTGTCGAGGAACTAGATGAAGAGAGAGAGAAGAGATGGAAAGCTGAACAAACTGAAAAGAAGCTTATGGATTATATTGATGAACTGCATAAACATGCGGATGAAAAAAAAGATATTCGTAGCCAGGCTCTTCTTACTACAGACAGGCTAAAAGAAATTATTTTTAAAGAGAGAAATTCCAAGCTGCAGCTGGAAATTATGGTTCACAGACTTCAAAATGAAATTAAAAAACTAACTATTGAATTAATTAAAGCAAGAGACCAACAAGATGATCACATTAGACACCTGAGAACCCTGGAAAAAGCGCTGGAGAAAATGGAGAGGCAGAAGGGGCAGCAGCAAGCCGCACAGATGCGACTTATCCAAGAGGTGGAACTCAAAGCTGCCGCTGCTGATAGAGAAATAAACTTACTTAGGACTTCTCTTCATCAGGAAAAGGAACAGGGTGCACAACTTCATGAACTGCTTGCATTGAAAGAAAAAGAACACAGGAAAGACATTGAAACAAGGGAGTTTTTTAGTGAAGCTGAGTTCCAGGAAGCCTTAGCTAAAGAAATTGCTAAAGAAGAGAGAAAGCATGAGCAAGTTATAAAAGAATATCAAGACAAAATTGATGCATTAAATCAACAGTATATGGATTTAGAAAATGAATTCCGTATTGCTTTAACTGTTGAAGCCAGAAGATTTAAAGATGTTAAAGATGGTTTTGAAAATGTTGCAACTGAATTAGCAAAAAGCAAGCATGCTCTTGTTTGGGCTCAACGAAAAGAAAATGAGTCTTCTTCTTTAATTAAAGACCTAACCTGTATGGTGAAGGAACAAAAAACAAAACTTGCAGAAGTTTCTAAATTGAAACAGGAAACAGCAGCAAATTTACAGAATCAAATCAACACACTTGAAATTTTAATTGAAGATGACAAGCAGAAGAGTATTCAAATAGAACTTCTCAAGCAGGAAAAAATGCAGCTTATTTCCGAGCTAGCTGCCAAGGAATCGCTAATTTATGGTTTAAGGACAGAAAGAAAAGTATGGGGACATGAGTTGGCACTACAGGGGTCTTCTCTAGTCCAAAATCATGGGAGAGTAGAGGCTCAGCTTGAAAGTTTGTACAGGGAGAATGAATGTCTGCGAAAAGCAAGTGAGCGTGACAGTGACACAATAAGAATCAAATGTAAAATCATAGACGACCAAACCGAAACCATTGGAAAATTAAAAGAGTGTTTACAGGAAAGAGAGGAACAAATCAAAATATTACATGAAAAAATCACTGAAATACAAAAATGTACTCAGGAACAACTTGAAGAAAAATCTTCACAACTGGATGAAATAGTTGAGAAACTAGAAAGACACAATGAAAGAAAAGAGAAACTAAAACAGCAGCTGAAAGTGAAGGAATTAGAACTTGATGAAATCAGAAAAGCTTACAGTACACTTAATCAGAAGTGGCATGATAAAGGAGAACTTCTATGTCATCTTGAAATGCAAGTAAAAGAAGTGAAAGAAAACTTTGAAAACAAAGAAAGAAAACTTAAAGCAGAAAGAGACAAAAGTATCGAACTACAAAAGGATGCAATGGAAAAGCTTCAAAGTATGGATGATGCCTTTAAGAAACAAGTTGATGCAATTGTTGAAGCTCATCAAAATGAAATAATACAACTGGCAAATGAAAAACAGAAATGTATTGATTCTGCAAATTTAAAGGTCCATCGAGTTGAAGAAGAAATGCGTGGACTTCTGGAAGAAACATGCAAGAACAAAAAAGCAATGGAAACAAAAATTAAGCAACTTGCTTTTGCTCTAAGTCAAATTCAGCAAGAAATTTGATGGTTCTGAGAACAAATTTAATTGAAATGGATCGGCAGGCCTATTGTAAAAATGATTAAATATTGTAATAGTAGTAACTGCTGTGACTTTGAAATGTCTCTTTCTACACATTTCATTCTGATTATATTTTAAAAGACTTTTGATCAAGTATTAATTGTATATGTAGGTTTTTTTATAATAAATTGTTGACAATTATGTGTATTAGAAAAACCTATCAAAATAACTAGACTTAAAACACTTTTTCTTGTTTCTGTGCTATACATTGTGTGGTCATTACACATTTGCCTATAAGTATGTTAATGGAAATTTAGTATTTTGACTACATGAGGGAAAGTATTTTAATACTGTTAACCTTACTGTGTTGATGAACTAATTATATTTATTGGTTGTCCTTCAGTTGAGGTAGCTCCATTCTTTTAAAATGCTCATAAGTATAGCCAAAAAATATTTTAAATCTGTATAAGAGATGTGGTATTTTTAAGAATGCATATATATGTCTCCACATGACTCATAATGACTCCTTTTTAGTTAGTTTATGAGAATTCTTACTTTACAACTTAAAACACTTTTATTCCATTTCATATCAGTTCATTTATTCCTATTTCAGTTTTGTCATCTCTTACGTTCCTGTGTATGCAGAACAAAGATCTGAACACTATTCTCCTTACTATTTCTGAAAGAAAGAGAATATAATACCAAACTCTAACTAA EMBV3_34304 CATGTATGCCCTAATGACTTCACTATACCTCATTATGTGAAACTTTCTTCCGTCAGGGGG Gene BVV0102_127209 + 0 NULL GK000007.2:13969422-14012123 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14843 GATAACTGGCCAAGTGTGAGGTTGCTCAGTGATAAATGTGTGGAGAGTAAGCACACCTAG Gene BVV0101_019296 + 0 NULL GK000007.2:82645379-82792842 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18422 GGAGAAGGAAGCAGAAGGACTGTGCCTGGGGCTCTGTTGTTTCACATTACACGCAGAAAT Gene BVT0102_230552 + 0 NULL GK000005.2:105217725-105538143 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196245 1 XLOC_118280 Coding TCONS_00196245 XLOC_118280 Coding Coding KCNA5 5:105535286-105540477 o TSS146077 5191 1 TCONS_00196245_2 598 0.0408399152379118 1 0 0.00262744472357274 0.00169220995270011 0.00239258414961599 0.000814587093920399 0.00206960841525327 0.000712631913475352 0.00159189828439149 0.00238475841855569 0.00491633578767714 0.000259407407795685 2.36412079148947e-05 9.52060678012225e-05 0.000277804515416274 0.000584264506085228 0.000613108692837835 1.73043602955083e-05 0 0 0.00184385226806864 0.00256333715390505 0.000849051164693566 1.42952710968447e-06 8.9562565120685e-06 1.61418090356536e-05 0.0013764204476083 0.00271701827964941 0.00109626685882267 3.47129553839052e-05 9.59470051038059e-06 5.79103155762246e-05 NM_001015552.1 KCNA5 Bos taurus potassium voltage-gated channel, shaker-related subfamily, member 5 (KCNA5), mRNA. 0.0 3947 99.82 0.423232517819303 NM_002234.3 KCNA5 Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 5 (KCNA5), mRNA. 0.0 3050 83.48 0.542092082450395 TCONS_00196245_2 sp|P22460|KCNA5_HUMAN KCNA5_HUMAN Potassium voltage-gated channel subfamily A member 5; 0.0 966 85.83 0.998327759197324 3 coding 0 0 0 0 0.0235367307664852 0.836409507017697 -0.00770140974437869 0.867495407838655 CGGGGAGCCACGCGGGGTGGAGGCCGGGCCTGCGGCTGGAGGTTGCCTCGGCTGGAAGGCGGCTTTTGGCTGCTTGGTAACGGGCTGCCAGAGCCGAGCAAGGCAGAGCGCAGGGCAGCGGCTTCTTGACGTCAGGACCCAGCGAGGGGACCGCGCCAGCCACAGCAGGGCCGGCCCACAGCGGGGCCGGCCGCCGGCGGGAGAGGAGTCCAGCGCGGGGCGCCCTGCGGGCTGAGGGGGGCGCGGGAACCGGTCCGCAGGGGCGCAGCATGCCCCCCGCCCCCGGGCCATGGAGATCGCCCTGGTGCCCCTGGAGAACGGCGGTGCCATGACCGTCAGGGGAGAAGAGGAGGCCCGGACCACGGCGGGTCAGCTCCGCTGTCCCACGACGGCCGCGCTCAGCGACGGACCCAAGCAGCCGGCGCCCAGGAGGCGCAGCGGCGGGGAGAGGGGCGCGGACCCGGGAGGCCGGCCGGCGCCACCACCGCGCCAGGAGCTGCCCCAGGCTAGCCCGCGGCCTCCGGAGGAAGAGGACGGAGAAGACGACCCCGCCCTGGGCGTGGCGGGGGACCAGGTGCTGGGCCCGGGGTCCCTCCATCACCAGCGCGTCCTCATCAACATCTCGGGGCTGCGCTTTGAGACGCAGCTGGGCACCCTGGCGCAGTTCCCCAACACGCTCCTCGGGGACCCGGCCAAGCGCCTGCGCTACTTCGACCCGCTGAGAAACGAGTACTTCTTCGACCGCAATCGGCCCAGCTTCGACGGCATCCTCTACTACTACCAGTCGGGGGGCCGGCTTCGCAGGCCAGTCAACGTCTCCCTGGACGTGTTCGCAGACGAGATCCGCTTCTACCAGCTGGGGGAGGAGGCCATGGAGCGCTTCCGGGAGGACGAGGGCTTCATCAAGGAAGAGGAGAAGCCCCTGCCCCGCAACGAGTTCCAGCGCCAGGTGTGGCTGATTTTCGAGTACCCGGAGAGCTCGGGCTCTGCACGGGCCATTGCCATCGTCTCGGTCCTAGTCATCCTCATCTCCATCATCACCTTCTGCTTGGAGACGCTGCCCGAGTTCCGGGATGAACGCGAGCTGCTGCGCCATCCCCCGGTCCCCCACCAGCCCCCGGGACCCCACAGGGGGCCCAATGGCAGCGGGGCCGCAGCGCCCCCTTCTGGCCCCACGGTGGCGCCTCTCTTGCCCAGGACCCTCGCTGACCCCTTCTTCATCGTGGAGACCACGTGTGTCATCTGGTTCACCTTTGAGCTGCTGGTGCGCTTCTTCGCCTGCCCCAGCAAGGCTGAGTTCTCTCGGAACATCATGAACATCATCGACGTGGTGGCCATCTTCCCCTACTTCATCACCCTGGGCACCGAGCTGGTGGAGCAGCAGCAGCCGGGGGGCGGGGGCGGCCAGAACGGGCAGCAGGCCATGTCCCTGGCCATCCTCAGAGTGATCCGCCTGGTCCGCGTGTTCCGCATCTTCAAGTTGTCCCGCCACTCCAAGGGGCTACAGATCCTGGGCAAGACGCTGCAGGCCTCCATGCGGGAGCTGGGCCTGCTCATCTTCTTCCTCTTCATTGGGGTCATCCTCTTCTCCAGCGCCGTCTACTTCGCAGAGGCCGACAACCAGGAGACCCATTTCTCCAGCATCCCAGATGCCTTCTGGTGGGCGGTGGTCACCATGACTACAGTGGGCTATGGGGACATGAGGCCCGTCACCGTGGGGGGCAAGATCGTGGGCTCCCTGTGTGCCATCGCTGGGGTCCTCACCATCGCCCTGCCCGTGCCGGTCATTGTCTCCAACTTCAACTACTTCTACCACCGGGAGACGGACCACGAGGAGCCGGCAGCCGTTAAGGAAGAACAGGGCAGTCAGAGCCAGGGGACTGGATCGGCGGGCGGGGGCCAGCGAAAGGCCAGCTGGAGCAAGGGGTCCCTCTGCAAGGTGGCAGGGTCCTTGGAAAACGCGGATGGCTCTCGAAGGGGCAGTTGCTCCCTGGAGAAGTGTAACCTCAAGGCCAAGAGCAATGTGGATTTGCGGAGATCGCTGTATGCCCTCTGCCTGGACACCAGCCGGGAGACGGATTTGTAAGGGGGTCCCAGGCAGACATCTGGCCACGGGCTGGGGACAGCAGAGGCCTTCTGACCCTGGGGATCTACTTGACACCGCAGAGTATTTCAAGCCCACCCTTGTACCTGGGTCTGTCCCTCTTCTCTCACTGCTCCCCTCCTGCCTCCCCCTCCACCTTGATCCCCTCATTTTTCCTCTTCTTTCCATGACCCCAAGGGTCGCCTATTTTTAAAAACTACCACATTCCATGACGCAGGAGCTGTTGAAATGGTGAGCGCTGTAAGATGGACGTCTTTGTAGCCAGTTTCCTACACCCAGCAGAGGGACAACCCAAACAAAAATGACTTTAAATAGCCCAGATCTCCAGGGATTTTGTAAAACCCCTCCTCACATCTCTGTGTTCTAGATTTGCTTTACAGATGATTATATTTGTGTATAAGGGGAAATATTATTTTTATGGCTGGAGAGTGGATTTTTGTACCGCAGTTCAGATGGAGATATTTTGGATATATTTTCAAGACGTATGTTGTATTTATGGAAGAGATGGGTTTTGTGGTGTTCTCCTGTGATACTTCCGGCCGTTCTAGTTCCTGTGTCAGTAAGCCTCTCTTTTCTGAGATGTAGTGTTGGTGCTTCGTGTCTAAGGCAGGCAATGCTCTGGAAGAAAGGCAAGTCTAACTTTTTTCTGTGCGCCTTAAACAATTCTTGTAACTTTCTTCAAAAAGCATTTTAATGATGTAGGAGGAAGACTTCTGATAATTCATCCTTTTGAATTTTTATCCCAGGAAATAAAATGTTACTCGATTAAGGCAAGTGTTAGTTTTTCCACAGCTGATGTATCTTTGGAAATTAAAAAAAAAAATAGTCTGTCCCTCACTGTTTATGGTTCTGGAGTCAGAGCAAACTTGACTGGGGTGGAGGAGGGCTTGGAAAGTTCATGGTTTGATCATTGACATCTCTTTGCTGGGCCCCCTCTGTGCCTTGAAAACAAAGGGGTGGATTCTGTTTGTCTCAGGTGGTTAGAACACACACACTCCCAGATGGCTTTAGACCCAGCTGTCAGCGTGGTGTGTGGATGGAGTTAAAAGGCAAACGATGACCAGACCCTCCCCTCCTCCCTCCTGCCTGCAGCCCCGCTGCTGTCTCCTGGGGCTGGGTTTCCCAGCCTTTGTCTGCAGGTTTTAAGCCCTACTGAACATGATTCTCAGCTCTGAGAAAAAAGCTTGGTTCTCCCAAACAGGAGACCTCTCCGAAAAAGTGTAGCCCTGATGGGAAAATCACAGAGGGAGGAGGCAACACCTTATTATTATATTCCCACCCTACCAAACCATGGTGAAGCAGAGAAGGATGAATTGCCTTTGTAGCAGATGGAGGCAGAGAGAGGCTGGAAGGATTTGTTTGTCCACATTAAGGGCTGATTTCTACAGATTGTAACCTTGCCCTGAGTAATCTCTAAATTCACAACAAATCCCTTTGTTCCCTTGTCATCGGATGATACTGACAAAACATCGCAGCAGGTGTAACGCTGGCTGCAACGTCTCTCTGGGCTTAGTTATCCACCAGGGGTTCCTGATTCCTGCTGTTGTTTTTATTTTTTTCTGCTGAACAATCCAAAGACTGGTGGTTTGGCATCCTCACCAGGGTGGGCTGGTGGTCCACAACCACATAGCCCCCATGACCACAGCGAGCCTGATGGCTAGTTGCGGGGCACATTCAAGTTTGGGAGACGGAGGGGAGGAGGAGGATCTAGGAGATTGATGTCTTAGGTTTGTGGATTTAAACGAGATGCCCACGCAGGAGTAAAAGCCTGTCTGTGACCGCCTGGAGTCATTTCCAGCCGGGAACTGTGAACATCACATCGGAGAAGGAAGCAGAAGGACTGTGCCTGGGGCTCTGTTGTTTCACATTACACGCAGAAATCAAGGAGGGCGAGTGGGGACTCGCTGTTTATTTGTAATTTACAATCCTCCTAAAAGCGGGGCCTCTTGCCCGAGCTCTCCTCCACACCATCTCACTTCCAACCCCTCTGTGGCTTCCCAACTGATGTGGTTTAATGCACCCTTCCTGGCTGGGATGCGGTCACCCCTTTGGTTCCACTCTCCCTTGAAGATAAAAGAGAAGGCGCCGCCCTTGCCCTGAAGGCCGTTTCCTTTAGGCTCGAGCCACAAAGAGAGAACTGTGGCCACCCAGGCCTCAGATGAGTCCAGGTACCTGTCAGGTGTTGGTCCAAAGAGACTGAACGGCTCTTTAGATTGTCCGGTAAAAGGTACAAGCTTATACAAAACCTTGGGGATGGAGGGGGCAGGAATGAGAGCGTTGTGTCTCTATTTTGTGTGGGATGAGGGGCGCTGTCCACAGGTTTACGAAGGGGATGCAGGTGGTTCCAGAGGGACCTCAGTCCCCTGTTGCATCCCCGAGGCTAGTGGTACCCATCTTGGGGCACTGGGAGGGCCCCCAAGGGCAGTGAAGGTATTTCAATCTCTCTGTCTTCTCAGTGCACCTGTTGCTATGGTTCTGGAAATGGGTCCCCCAGTTTCACTCCCACCATCATGGTGGTTTCTCTGTTTACGTGATTGGCAGGAAAGGAGTGTGAATGTCAAGTCTTACCCAGGTCACCTGAGGCAAGGAGGCTCTTCCTGTCCTCTCTCCCCCCTCCCCTTCACTGCCGTCCTTGATTTTCCTTCCGGAGGAGATTAGATCTAATAGTCCCGGCCAAACCTTTATTCAGATGTTGCTTCTTGGCTCCCACAGCAGGAAACCATCCCTGGGTTTAGAATCTACCAGCCTTGGCAGCCTCCAGGCTTCCCATGTGGCGCTAGTGGTAAAGAACTCACCTGCCAGAGAAGGCGACTCGAGTTCAATCCCTGAGTAGGGAAGATGCCCTGGAGGAGGGCATGGCAACAACCCACTCCAGTATTCTTGCCTGAAGCATCCCACAGACAGAGTTGCCTGGCGGGCTACAGTCTGTAGGGTTGCAAAAAGTCGGACATGACTGACGCGACTTGGCACACACCTGCCCAGCAGGGATGGACCGGTGTGGTGCCTTTATCTAAGGACAGCTGCTCTCCTGCAGAGCATGTGGCCCTGGTTTTTTTTACCACCTACTTTTTCTTCTCCTGCCCATAT TCONS_00196246 s 5' 0 TCONS_00196246 s 5' 0 EMBV3_25353 CCCAGGGAACAAGGATGAGACAGGGGAGAAAACAGGTGGAAAAGGAAAGAATGTCCAGGC Gene BVV0102_348204 + 0 NULL GK000001.2:52194980-52363680 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000598 1 XLOC_000159 NonCoding TCONS_00000598 XLOC_000159 NonCoding NonCoding LOC100848469 1:52195050-52200739 = TSS305 1757 2 TCONS_00000598_1 72 0.289129197495731 2 0.691455696202532 0 0 0 0 0 0 0 0 3.14347840711831e-05 4.68354040527849e-06 1.56347252471736e-05 0 3.7560320580047e-05 5.35457754320405e-06 3.37411700610308e-05 0.000526127267202701 0.00117170258218609 0.000285610853596654 0 0 1.72779098014528e-06 0.000646194707080868 0.0014515561318106 0.00122132776797347 0 0 0 5.46680603851226e-05 9.67052426798562e-05 0.000544079598807527 XR_138608.2 LOC100848469 PREDICTED: Bos taurus uncharacterized LOC100848469 (LOC100848469), 0.0 3169 100.00 0.999430848036426 NR_028301.1 LINC00883 Homo sapiens long intergenic non-protein coding RNA 883 (LINC00883), transcript variant 1, non-coding RNA. 1e-168 598 68.69 0.906089926010245 0 noncoding 0 0 0 0 0.152682118384523 0.235143720211912 0.0669541248195597 0.557179320901589 CACCCACGCGGCGCTTGTCCAAAAGTTACAGATGTGCACCGGGACCTCGCAGTCCGCGCGGCTGCCTACTGCAGAGAGAGAAGAGAGAACGCCGCAGGGCGCGCCGTTGGCTTCTGCGTGAGTGACAACGCTGCTTTCCCAGTTCGACCCCGTCTCCTCTGCGCTCCGCGGAGGGCTGGAGTGAGCATCGTTTATCCTTTGGAGCATTTATCCTTCGCCAGGAAGAGCCAGTTGTGTTTGGTCCCTCGTGCCTGGCCATTCCCAGGCTGGATTCTTCGGAGGTGGGCTTTTACACTTTCCTTAGTGGATTCTGACTTCCTGTGTCTGACGAGCCTGGGCAGTACTACATCTCCTGACCAGGGACCGAAAGTGCCCTGGTAGGCTCATTCCACACCCAGCTTCTCGTCAGGAAGAGCTTACCCAGGCATCAGGATCAATGATGAACTTTCAAAAAGGAAAAAGATGGAAAATCATCGAAATTATCATAATCTGTGCTCCCAACTAAATAAGTGTTTCTTTGTAGCATGTGTAGAGTCAAGGGAAATTATATTCCTGTGTTATTTAGTCTACCAACAACCTATCTGCATACTGTCTTCATCTAGACTACTCTTGAAAGCAGAGCCCGAGACAAAGGTAGAGACATATTCTATTTGGAAATGTGGTCCCAGGGAACAAGGATGAGACAGGGGAGAAAACAGGTGGAAAAGGAAAGAATGTCCAGGCAAAAAAGGTAGTGTTAGTACCCACTAGTGTTCTTGGCTACTTAGTGCAGAACCCTCCCAGTATCCTAATTAAACTGTGTCTCAGAATTGTCTGCCTGAGGGATGAAAAGAAGAAGCATTTATCTGTCAGCTGATCTCACCTGTGTGCTGAGGGCTGCTCCCATGGGGCAGCAACACCCCCATGTGGAGAGCCTCACTGGGCTACAGCATCACACGTGCTGCAGCAGAGAAGCTTCAGGACAAGAAGCTAGATTCTTGATACACGCCTGAGATGAGGCACTGTCAGCACAGAGCAGGGTGAAACCTGCCCAGAGCTGTTCACCAAAGCCACAGCTGGAATTGGAGGTGGAAGACATGGGAGGCAGTGCACAGGAGGCATTTCTGAAGCCTAGAGAATGTGCCATTAGCCTTGTCTAAATCTATATTCTCTCTCCTTTCTATCATTGCAATTTCATTGTCCAGAACAGAGCTTGGCAGAGGGCTAAATAGGAAGGCTAAATGTATTTCCTAGAAGCTGTATGTTAATAACAGTTTTAACCTTGAGTAATGCTCATAAGAAATAGAAAGTGACATTAGAACTTGAAAAAACTTAAGTTACTCTATTGGATAGCAGGATTAGATATCCTCTAAATTCATGTAATCTGAGAAGTAATCATAAATTGGAGAAATAAAATCAACCATTTCTTATATTTCCTTGAGCTTTATAAATGTCATTAGTTTTTCCTAAGATATTGTCTTCTATTGTTACATAGCACTAGCGATATAGAAATTACAACCAATGAAGGGAACACTGGTAGGAACACAGGAATGAAAAATGTTGGAATAATTTCCATCACATAAAGGGTTGGTATTAATATAGGTTGGAATCGGGGCAGGGGATGGGGGATAACTGCACATTTTGATTTGGGGTTCCTCTTTGAAGTTCCATTTTACCAGAAATAATTTTCTTTCTGCCTACATCCATGTGATAGCATAATCATCCTCTTATCTGGTCTGGAATCACCATCAATAGGAATAAACTTCTGAGTTACTTAG EMBV3_25687 CAGCTGATGGTGGGGTCCCTGAAACTAGGGTTCTTGCTGTCACTACCGCTGACAGTTTTA Gene GeneID:788711|LOC788711:XM_002693839:137_cdna Constitutive 0 NULL GeneID:788711 15 GENE LOC788711 NULL similar to olfactory receptor 1420 EMBV3_34398 GATTGCCTGAGTCACGTGCCCTAAAAGGCCCAGAGCGCCTGTGCACATCTGTCCCCAATT Gene GeneID:508521|AGTRAP:NM_001075363:49_cdna Constitutive 3 NULL GeneID:508521 16 GENE AGTRAP MGC140564 angiotensin II receptor-associated protein EMBV3_06269 GGCTGTGCTGCAGAATTTTCAACATGCCTGTCTTCTCCATAATCCTCTGTAGCCAGAATT Gene BVV0102_238829 + 0 NULL GK000028.2:31119173-31154551 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159535 TCONS_00159532 TCONS_00159537 TCONS_00159538 TCONS_00159533 TCONS_00159536 1 XLOC_097437 Coding TCONS_00159537 XLOC_097437 Coding Coding SAMD8 28:31058926-31124068 j TSS119515 5481 1 TCONS_00159537_3 317 6 0.915951551250365 0.000580777340696843 0.00115492506715812 0.000688768528957366 0.00178509037510214 0.000797687320720322 6.37164114348502e-09 0.0005735711964141 0.00207464867158208 0.0025589827696297 0.00064718359299069 0.000356465231234403 0.000366106821128492 0.000531716541074538 0.000562029169571056 0.00153768553964656 0.00136728652536889 0.00379762055648381 0.00246857501021954 3.3545754260353e-38 0.00123076200080882 0.000246212013328812 3.69443088434061e-09 0.00127918512889269 0.00353774086766826 0.000764718920902905 0.00172129281935701 0.00140493078264471 0.000285651309014774 0.000198386250805396 6.94349526368808e-76 XM_612450.6 SAMD8 PREDICTED: Bos taurus sterile alpha motif domain containing 8 (SAMD8), transcript variant X5, mRNA. 0.0 7609 100.00 0.769567597153804 XM_005269540.1 SAMD8 PREDICTED: Homo sapiens sterile alpha motif domain containing 8 (SAMD8), transcript variant X1, mRNA. 0.0 1656 93.14 0.201970443349754 TCONS_00159537_3 sp|Q96LT4|SAMD8_HUMAN SAMD8_HUMAN Sphingomyelin synthase-related protein 1; 0.0 635 96.82 0.987381703470032 2 coding 0 0 0 0 -0.035201473899937 0.84614817450057 -0.00596978362361451 0.901918680919267 CCCAGCCTCCACTCCGGCTCGCCTACCCGGGCTCCGCCCCCACCGCTTGAGGCGTCTCTCTCCAGGGAGGCCCGGAGGGCACCGGACTCCGGCAGCGGCTCGGACGCCGACCCGGAGACGGGTCCGGGGACCCCGATTCGGAACAAGGAGACAGTTGAAGAAGAAATGGCTGTTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCATGTAGCTGTTTGGCTGAAGGATGAAGGCTTTTTTGAGTATGTGGATGTTTTATGCAACAAGCACCGACTTGATGGAATCACATTGCTTACATTGACTGAATATGATCTCCGATCTCCTCCTCTGGAAATCAAAGTCTTAGGGGACATTAAAAGGTTAATGCTCTCAGTTCGAAAATTGCAGAAAATACATATTGATGTTTTAGAAGAGATGGGCTACAACAGTGACAGTCCCATGAGTCCCATGACTCCATTTATCAGTGCTCTTCAGAGTGCAGAGTGGCTCTGTAATGGGGAGCCTTCACATGACTGTGATGGACCCATCACTGATTTGAATTCTGATCAGTACCAGTATGTGAATGGTAAAAACAAACATTCTATTCGAAGACTGGACCCAGAGTATTGGAAGACCATACTGAGTTGTATATATGTTTTCATAGTATTTGGATTTACATCTTTCATAATGGTTATTGTCCACGAGCGAGTGCCTGACATGCAGACCTATCCACCACTCCCAGATATATTCTTAGACAGCGTTCCTAGAATTCCATGGGCCTTTGCCATGACAGAAGTATGTGGCATGATTCTGTGCTATATTTGGCTCCTGGTTCTTCTTCTTCACAAGCACAGGTCCATACTTCTGCGAAGGCTTTGTAGTCTGATGGGCACTGTCTTCTTGCTTCGCTGCTTTACCATGTTTGTGACCTCCCTCTCCGTGCCAGGACAGCACCTTCAGTGTACTGGAAAGGTATATGGCAGTGTATGGGAGAAATTACACCGGGCCTTTGCCATTTGGAGTGGCTTTGGTATGACCCTAACTGGCGTTCACACTTGTGGAGATTACATGTTCAGTGGCCACACAGTCGTCCTAACTATGCTGAATTTCTTTGTCACTGAATGTTGTTCCTGAATGGTTTTTTGCCTATATGTTGACAAAGTTCTCTGTCCTGAGCAAGGCTGTGACCATAGCAAGCCAACAAGAACAATCAAGAGTCCTTACCTGTCTGTCAACAGAAGTTTAAGTAGATGTTTTCTGCCCCTTCTCTTTAGGCAGACTTAATATTATGATTGAAGTCAGGCTCTTAGCTTTACGTTTTGACTATTTGCCTATTGAACTTAAGCTAATCAACTTAAAGCAGTTTGCTGGTTGAAAGATGTAAAAAGAAAAAAAAAAAATTCCCCAGTAGGACTCTAGGCAAGAAATATTGAGAAGAATACTAATAATTTGTTAGGTTCCTTATTTTCTTCAGAGGAAAAACCCCTACCCAATGAGCAGTACTTGTTCTTTGAACGAATCTCTGTGTCTTTCTAAAAAAAAAATGCAACTCTGGTAAGTGATCCATTTTACTGACAAATTAATTTTTGCCTTCTGAACTGTCTGTAAGAAAAGTATACTGAAGATACCAGGATCCTTGAAACGAGAATGAAAGAGGCCGTATATAAGATGACAAAGTACAAATATAATGCTGGCATTTTTTTCACCAAAATTAACAAAAGATTTAGTTCTGTTTTTGTTCTAAGGGTTTAGTATGATCATCAGTAAGTATTCATGAGGGAAAAAATGTCTGCATCCATAAAAATAAAATTGGCTTAATTTTAGTGATGAAAGTCCCTGGAATAACTGTGCTGTGACTGTTAGCCGGATAGATGACAGGCCAATTTTATGCTTTTTAATGATGTTATTTAATGAGCAAAATGAGAGTTTTTATCAGATGTTAGATAAAGTTCTTATGTCCTTAAATGGGGATGTTTGCATGCAAATTTTTGTCTGAAATTTATAACAGGTTGCAGGCATAATATAACTATTTGGTTTTTGAAATTTCTCATCTTGACCATCAGACAGCCTCAGACATATTTGGATATGAAAAGGTTTTGTTGTTTTTTATTTTTAAATACAATTGTGTACATACATTCTTTCTATTTAGCTTTAATTTGGCAGTCAGGAGTAATATAACTTAGTTGCTGTTTACAACACTAGAAATTTAGTACCTTAAGTAATTTGACCTCTGTGATAACCTCTGTCACTTTAACTTTTAATGATTTTGTACAGTAGTTCTGATAGTAGGATGGTTGTAGAATTAGAAGTTGAACCCCAACTCATGAGCTTAGCCACTTGGAATATTAATTGTGTAGTTTTGCATTCAGTTTTAAAACAAGGAGTTAGAAAAGGTGCTGGCATATTGAGGTCTAAAATTAGGCCACTTAGCAGAAACATGCTGTTTATATAGTGAAATATTTTATTTTTGCACTTTGAGTCATACTCCCACCCCCTGTAAGTTACAAAGGAGCCTGAGTGGATTGGGCGGGAAACAGATATAATGCAAGCAAGTTTCAGCTAGTGCTGAGTGACCCCAGTTTGGGTATTCTCTGAATATTGTTTTTTTATTTTTCACTTGAGAAAATGTCATGAGATAATTTAGTTTTATTATGCTTTTAAATCTCATACTTTAGAATCTGATAATACCTTAAATTGTTGATTCTGTTACATTCTGGGGATGAAAATGTCAACATTTCATCCAAGGAAAGTGCATTATCATGAAAGTTGAAGGATGTTTCCTATGCAGAGTAGTTTGACCCTTGAATTCAAAAGATACATAACATCCACTTTTTCCAAATGACAGAAGAAGCCTGAATTTAGCTAGGAAGGGACTGATTTTGGTTTTTGGAAAAATGTTTGGAAAAAATCCGTGGCACCATTAATTCAAGAATGTTGAATAACTACTTAATGGTAAATTTCCTAACAGCAGTCTTCTTTCCTTCATATGGATTTTATTCTAGAACAAAATAGGAAAAAAAAAATTACAACTAACTTTGCAGAGCTATTGATACTGAGAGTGCCTAACAGCAGACTGCAATGAGGAGTATAAAATAACTTCCCAACCTTCCTTTTACCATATCCATTTTGAGGAAAAGGTAAGCTAGATTTATAATTTATTGTTATAACTATTACAAGGCAGTGTTTACATACATTAATCATCTCCAGGTCTCTTCCTTGGAAAACTTTGAGACAACATTTTTTTCCATTTCTTTTTTTAATATAAAACTTATATTTTTGTTACTTATTGTTTTGTCTGGAAATTTCCAGATTTTGTCTTTGTATCTTTTTTTCTTGTAACAATTTTGTTAAAACCATAATGAAAGTAGAATTTACATTTTGACTGTGACTGTGGCTAGGTAGAGAAACTGCATGCCTTAGATCTACAGATTTTTCACCTTGTATGCGGTTTCAAACATGTAAGAGGTTTACCTCATTAAACACTGAGACTTCGGTATAGAGGGAACCAAGGCAATTTTTTGTTCAGGGATGCAAACTGGAGGTTATACTGAAAGTCTTCCATGCAATTTCTGTCTTCTTAGGGGCAGCATTACCTTTTTTTCTTTTTTTAAAATTCCTTGCAGGACAGTGTTACTGAAGGTTAGTTGAAGTTTGTAGAGAATATCAGGTTTAGAAGAAGGCAAGTTTGCTATTATCACCACATAATTTGGGAGAAACCTTTTTTGGCTGTGCTGCAGAATTTTCAACATGCCTGTCTTCTCCATAATCCTCTGTAGCCAGAATTGCTTAGGTAAAAATACACTTTCCATATGCTAGGTCTGTTTATTAGTATCACTTTAAATCAGAATGTAGTGAACTCGGCCACAGAGCCAATCAGTTAAAGGAGTGTGGACTGTTCACAGAACTCCACGCTAGAGACCTGCTGATGATGTAACTCTGGCACTGCAAGTGGCATTCTTCCCTACCCTGTACCTGCTTAAAATTCTTACTTAATAAGGACAGAGGTGCCAAATCCTTTTATAGCTAATATGAGACCCTATGTTTTGAGGACACCTGTTTGGAAAGTGTTATTTATATATTCAAAGTGATATTCATAACACTAACCTGCTTTGACTGTATTCAGTAAAAAAGCAATTTCGTTGTCAGTTTCATAGTAAACTTTTTTTAGAGGATTCTTGTTCCATAATGTTTTAGAACATTAACCATATTCTTGTTTTAAACTCTTTAATAAATTTAATTCTTTGATTGTCTTCTTGTAGACTTAAATTATCCCTTACTAAAAGTAATTATAGTAACAATCATTTGCCAGTTCTTTGCAGGCATTTGAGATAGGCTAACTCTTTTATAGAATAGTCCCATGGCTTTCTTAAACAGTATTGGTTTCATTTAGAGAGTTTCAGAGCCAACAAAGCATGTCAACTGTAATGCCGTCTTTACTTGGCTGTGACAGTTTGCATTTGTGAAATGTTTAATCTGAATTACCCTGTACTGCTGTAGAGGAAATTGTTAGTAACATCAAAAGTCAGACTGTTGCTACAAGTGACCAGTGAGAAAGGAAAGAGGTTGAGGGATTTTTCCTTCTCTTTTAATAGCTTTGAATGACTGAAATTACTATGGAAATAGGTTTTGGTGCCCCTCTCACTTATTCCTCACCCCCAGCAAAGACCACCAACTTCAAGTAACTAAAATGTGGCCTATTATTTTGCATTAAGTTGAATTAAAACATCTGTGCAATCTATAAGCCATAATTCAGCTTCCCCCAAAGTTAATTTTTTAGACTATGGTTCTACCTTATATTAGCCAAGGACTTTTTCTCTGTGTACTCCATGTTTATGCATAAAGAAGTTTTGTACCTAATATGGAAGGAGAGGGAGTACTATGTTAATTTTGCTGTTATTTCAGCTCTGTTTCAATCTGAACTACTAGGTTGTCTGAACTAGTGAAGCATTGTTACCAGTTAGTAATACCATCTTTAAAAGGTTCAATTTTAATAATTTTTTATTCAAAGAATCTATGACTTGTTAGGACAATTGAAGTATTTCTGATATGAAACAAAAGAAGTGGAGACTGGTACTTAATGGGGGAAGCAAAATTAGCTTGGGCTAAGATGGGCATGTTTTGTTCTATGAATTCTACCTAAATGTCACCCAATGTGCAGAGAAACTAGTATTACTTGAAGATGTGAAAGTTCCTGTGGTAGCCATACCTTGAAGCACAGTATTGTATATAAGTAAATATCTCAATTCTAAATTAAATCCAGATTTAACTAATATATATTATTTTATATCTTTGTTGTATTAAAATGTTTAAAAACACTAAAAATAAAACATTTGAAAATTGGATTGTAGTCTCTTCTTTAAATGTCTTTGCATTATTAATGCAGCTGCTTTATGTTTTATAAAGTGAATTTTTTGTTTTTGCAAATGATTGGGTCCTGCAACTTTAAATACTAATGTATTGTCTAGTCCCTGGCATGCACTACTTCTTAGTTGTCTA EMBV3_40532 GAGGGTTCTGATGTGGAAGATGAAGACATGGAGGAACTTCTGAATGACACAAGGCTCTTG Gene GeneID:508581|DDX55:NM_001046007:96_cdna Constitutive 0 NULL GeneID:508581 17 GENE DDX55 MGC134525 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 EMBV3_40742 CTTCAGTTAAAGGAAACCAGTGACATGGGGAATCAGGGAGACCTTTGTGACCAGGAGCAG Gene BVT0101_037012 + 0 NULL GK000004.2:78841976-79148449 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42561 AGCTCAAGCTCTGGGATTACCCGCTCCTGAAGGTCTTCTTTGTGCTGATCTGCTTCTTGG Gene GeneID:100300494|LOC100300494:XR_083770:562_cdna Constitutive 0 NULL GeneID:100300494 10 PSEUDO LOC100300494 NULL hypothetical LOC100300494 EMBV3_11408 CCGGCTTGTGAGTGGACGGATTGACTTGGGGTCACCTCTTCTCTTTGCTTTGGTTTGTTT Gene GeneID:616156|CDC34:XM_002689138:116_cdna Constitutive 1 NULL GeneID:616156 7 GENE CDC34 NULL cell division cycle 34 homolog (S. cerevisiae) EMBV3_29277 GTTTAGAGAAGTCTAGCCCAGCGTGGAGTTGTAAGTTATAGAGGAACCTCAGTGTCCCGG Gene GeneID:444867|NOD2:NM_001002889:93_cdna UTR3_Alt 2 NULL GeneID:444867 18 GENE NOD2 CARD15 nucleotide-binding oligomerization domain containing 2 EMBV3_01532 AACGGGGACTGACTAACCACAGTGTCTACTATCCGTGTGAATGCAGTCAACCCCACGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03827 GACGTTCTTCATCTAACTAGGTGTTCATCTCCTCTAAATGGGGAGAAATTGTTGTAGCTG Gene BVT0101_035773 - 1 EMBV3_17648 GK000022.2:29989524-30035340 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09452 GGCTGGTCTGGACTCTTATGCTGAAATTCCACCCAAACCAGGAGAACTTAAAACAGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13309 TCCATCCACCGTAGGACAGAGTTAAAGGCATTCTTCGCAGGTGTATTTCCTATGCCACTG Gene GeneID:539501|HELZ:XM_002696228:49_cdna UTR3_Alt 2 NULL GeneID:539501 19 GENE HELZ MGC127411 helicase with zinc finger EMBV3_12351 CAGGCCCCAGGAGGCTGCCCAGGATTACAGCTGAGAACAGTGGGGTTACACACACATTTT Gene BVV0101_009653 + 0 NULL GK000009.2:95744857-95889261 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13310 CACTCCAGGCTCACAAAAGGACTCATACAGGCTGCCTAAGCAGATTCACCCATGCAAACC Variant GeneID:540823|ZNF367:XM_002689831:26_cdna 569^688 1 EMBV3_31737 GeneID:540823 8 GENE ZNF367 NULL zinc finger protein 367 EMBV3_31656 GGGGATCACCTTTGATGACTTCCTAAAGATCTGGCAGGGCATCGACATCGAGACCAAGAT Gene GeneID:787094|LOC787094:XM_002694586:663_cdna Constitutive 0 NULL GeneID:787094 17 GENE LOC787094 NULL similar to tescalcin EMBV3_28027 TTCCTCCCTCTGAAAAAGTTACTCCCAGGATTTTTTCCACCACTGGGGAGGAGGCAGGGA Gene GeneID:540023|BCORL1:XM_002699518:37_cdna Constitutive 0 NULL GeneID:540023 X GENE BCORL1 NULL BCL6 co-repressor-like 1 EMBV3_25544 TGTTGACCCTCCAAGGAGAGCTGGGGGTTGTGCAAATGGAAGGGGACGCAGTGTCAGACT Gene BVT0102_346338 - 1 EMBV3_31328 GK000019.2:48882737-48886901 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01994 TCCTCACCTGAGTTCAACAGCCAGTTTGGGCTCGTGGACATCCCTGTGGAGTTCAAGCTG Gene GeneID:534369|ATP13A1:XM_002688515:75_cdna Constitutive 0 NULL GeneID:534369 7 GENE ATP13A1 NULL ATPase type 13A1 EMBV3_14652 AGAACTTTGCCAGTCTTTAAAAATCTTGGCTTAATTTAATATATTAATCTGTCCGTGCAG Gene GeneID:407129|canx:NM_001105612:13_cdna Constitutive 2 NULL GeneID:407129 7 GENE canx MGC166317 calnexin EMBV3_01672 GTTAGAAAATGGAGTCTAAATACCTACAAGGAAGAATTTGGCTATAATGCAGATACCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13878 AGGCTCTACCTACAATATGTGAATCAAACCGTGTCATGAATCCTAGGACAGACTGATGAC Gene GeneID:539135|TOX3:XM_002694777:574_cdna Constitutive 2 NULL GeneID:539135 18 GENE TOX3 NULL TOX high mobility group box family member 3 EMBV3_34494 AGACAAGTTCGTCGCGGCCTTCGACTTCAAAGAAGCCCTGAACAAGGTAACCATCGACCT Gene GeneID:100298258|LOC100298258:XM_002683891:2_cdna Constitutive 0 NULL GeneID:100298258 Un GENE LOC100298258 NULL hypothetical protein LOC100298258 EMBV3_36098 CCAAAGTTGTCGATCCAGCTGTAAGGCTAGCTGATCAAAGTGCTCTTCCACAAACAATGG Gene BVV0101_004155 + 0 NULL GK000008.2:92789093-92824738 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228644 1 XLOC_138545 NonCoding TCONS_00228644 XLOC_138545 NonCoding NonCoding - 8:92819662-92823234 - TSS170409 2671 1 TCONS_00228644_3 144 0.361662298764508 2 0.2525903108373 0 0 0 0 0 2.23202924475035e-07 0 0 0 0.000107252667331767 5.14229404896626e-06 0 0 0 0 0.00247348111208086 0.00126179805524175 0.000781254649766762 0 0 0 0.0013949056945706 0.000599924916656815 0.00163252824186886 3.63155704326853e-05 0 2.19361320806105e-05 0.000300873279735501 1.81752515169079e-05 3.15131048191844e-05 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 899 84.59 0.303257207038562 0 noncoding 0 0 0 0 -0.136938620820004 0.515483566288127 0.0051084683708207 0.917463024368179 AGGGGGATCCTCCCTACGTGTTATTCTTAGGGGAGGGATGGGTTTTCTCTTTCAGGTTTCAACTGCTGCATCTTCCTGGTATTACCAGTGGGAATCATCTAGACGTGCATACCACCCATGGTGGCTCTACAACCTATTCTAGGACTTATAGGCAAGAGGCTGGAAAGAGAATGAAGGAAAGATCACCACCAGTGCCAGTGAACTCTTCTCAAGTTCTTTCAATGCCTGTTCAGTTCAATTCAGTCACTCAGTTGTATACAACTCTTTGCAACCCCATGGACTGCAGCACGCCAGGCTCCCCTGTCCATCACCAACTCCCAGAGCCTTCTCAAACTCATGTCCATCACATCGGTGATACCATCCAACCGTCTCATCCTCTGTCATCCCCTTCTCTTGCCTTCAATCATTCCCAGCATCAGTGTCTTTTCCATTGAGTTGGTTCTTCGCATCAAATGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGACTGACTTCCTTTATGATGGACTGGTTGGATCTCCTTGAAGTCCAGGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAACATCAATTCTTCAGTGTTCAGCTTTCTTTACAGTCCAGCTCTCACATCCATACCTGACTACTGGAAAAACCATAGCTTTGACTACACAGACCTTTGTTGGTAAAGTAATGTCTCTGCTTTTTAATATGCTGTCTAGGTTGGTCATAACTTTTTTCCCAAAGAATAAGGTCTTTTAATTTTATGGCTGCAGTCACCATCATCAGGATTTTGGAGCCCAAAAAAATAGTCTCTCACCATTTCCGTTGTTTCCCCATCTATTTGCCGTGAAGTGATGGAACTGGATGCCATTAGTTTTGTGAATGTCGAGTTTTAAGCCAACTTTTTCACTCTTCTTTTTCACTTTCATCCAGAGGCTCTTTAGTTCTTCTTCACTTTCTTCCGTAAGGGTGGTGTCATCTGCATGTCTGAGGTTATTGATATTTCTCCAGGCAATCTTGATTCCAGATACCAGTTAACACCAGCCAATGGAAGACAAGAACTGTTTCAGCCAAATGAACCCCTTATTGTCACACTTAAACATTAGTCCTCACACTAAGGTAGACACATTAAATTCTGAATGGTGTCTGAGAAGCCCTTTAACACAAGAAATTTTGTTTTTTAAAAGACACCAAGTCTCATATATTAATTTGCACTTATTGAGTGCCTACAGGGTGACAGGGACTATGCCTAGTGCTAGAGACCCAACGATGAGTGAGTAAGACAGCTTTCTTCTTTTCAGGACCTTGGCATCCAAGGGAGCAGCTAGTATAGTAAGGTGAGTCTGGGATGGTGGGGTTATAGGATACTGTCTATAAATCACCCCAAAACGCCAGAGGTCTAAGTTACTCCAACTTCCTCAGCTCTTCTGCAACCACTTTTGCTGAGCACAACGTGATCCACCGAAGAAGTCTCCAACTAACAAAGGAAATGTTTTACATAAACATTTATTTACAGAAAAAAATGAGAGGTGTGGGTGAAGGGAATTGGCTTGTCCCAGCTAAGAAGAATTTAAGGAGGGTGAGTTGACTCTTGGAGAAGGTGCTGTGGGGATAAGACATGTATCTTTTGATGTAAGAGGAAGATTCAGAAAATTATCCTTGAAGGGTTATTTCTTTTTCTTTCATTTCTAGGAAAACAAGTCTCTTGATATCCTATTTTCTAATCCAAATTCATGTGAGGTCTTTTTTCTGAAACTGAATAAAATTGACTTCCAAAGAAAGAACTGTGCTTGCCCAGAGGTGACACACCTTCTTGGCAGCAACTTGCCCTTACCTCAAAAAAGAATCAAGGAAACATCTCATTCCAGGGACTTCCCCAGCACTCTGTGCTTTCACTGCAGTGGGCATGAGTTCCAACACTGGTCAGGAACTAAGATTCCCATGTCATGCAGCCAAAAAAAGAGAAAGAAAACTTCACAACCTCACCCCAAATGTTTTACTATCTCACCTTGGTGACCAAAGCTTGTTGATCCTCACATAAAGAGGACTCTGAGGGTCACAACTGTCATTAGTCTCTCAAGGTGAAAACCAACATTGCCTTGCCAAGGCTTGTAGCCTTTGGGTCTCTTTTGCAAAGTCTGTTCTTTCCAATGCTTATATTCTCCACAGCTAACTGCACGTTAGATCCAGTCTCCTAGAGCTTTCTGCCCTCATAGGTGGGTGACTTCCTCACCCACCAGAAGAGAGTAAGCGCCCTTCTTTCAACTATGAAGAATATTTGACTGAGGGCCAAACATTTCTTCTGCTTGTCCTCATTAAAATTAATTTCTGTCAATTCACATTGAAACAATATTGACCAAAGTTGTCGATCCAGCTGTAAGGCTAGCTGATCAAAGTGCTCTTCCACAAACAATGGGATATTTGTTAACTCACAGTCATGGTTCATAACTCTTCAGCAACTCTAATCCTTACCTCCAAGGATTCCCCCGTATAAATAAACAAAGCAGGATAACAAAACAATAAGAGAAAGACCTGAGTTTTCAGCAAATGTAATTCCTAGTTAGAAAGCATTCACTAGTAATTTCTAGTCACTTGACAATAAGTTTGGTTTGCAAATGAAAATTCTGATTTTATTTGCCAAAGATCAGACACCTCAAAT TCONS_00228645 s 3' 2627 TCONS_00228645 s 3' 1505 EMBV3_31383 GGACCTCAACAAATCCAGCCGGGAGCAAATTTTGTGGCCCTGATAGGTGCACTCCTTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17486 AGCTGTCAGATGTCTGTGGCCCTGTTAAACTTCAGGGACTAGAGAGAGTACAAAAATGCC Gene BVV0102_340125 + 1 EMBV3_10773 GK000019.2:36422984-36444999 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093516 TCONS_00093521 TCONS_00093515 TCONS_00093522 TCONS_00093524 1 XLOC_057167 Coding TCONS_00093522 XLOC_057167 Coding Coding SPAG9 19:36273803-36426321 j TSS70124 7950 1 TCONS_00093522_7 1292 0.00930817610062893 29 0.948064805890491 0.0011436990917962 0.000731803486298873 0.00086388662818146 0.000423405899485699 0.000778794133172985 0.000583938341886291 0.000380609365785926 0.000915126685737206 0.000990196825440501 0.000311835193299436 0.000117543002907481 2.33098481091732e-08 7.18373748190363e-05 0.000214271892581247 2.40083146356828e-05 0.00249025228339824 0.00134204335777102 0.00175529329814782 1.10939896340544e-06 0.000943514329726197 0.000194397169834605 0.000867400558525897 0.000285229690070656 0.00101848775006259 1.39494411118519e-05 1.49221127304836e-05 0.000588343682884719 0.000296333374621799 0.000234809717341191 3.59329397153697e-06 XM_005220615.1 SPAG9 PREDICTED: Bos taurus sperm associated antigen 9 (SPAG9), 0.0 1.336e+04 99.40 0.93748427672956 NM_003971.5 SPAG9 Homo sapiens sperm associated antigen 9 (SPAG9), transcript variant 0.0 6890 89.24 0.645283018867924 TCONS_00093522_7 sp|O60271|JIP4_HUMAN JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4; 0.0 2506 94.10 0.99922600619195 1 coding 0 1 1 0 -0.00616147689613677 0.972129650458576 0.0540195731039633 0.385546552658867 GCCCCAGCTCCAGCCGCAGCGGCCCCGTCCCGTGCGGGCCCGTGTCGCCCCCTCAGCCGGAGACGCCCCCGGCCGGCGGGCAGCCCGCCACCATGGAGCTGGAGGACGGTGTGGTGTATCAGGAGGAGCCCGGCGGCTCCGGGGCCGTGATGTCGGAGCGGGTGTCCGGCCTGGCCGGCTCCATCTACCGCGAGTTCGAGCGGCTCATCGGGCGCTACGACGAGGAGGTGGTCAAGGAGCTGATGCCACTGGTGGTAGCCGTGCTGGAGAACCTGGACTCGGTGTTCGCGCAGGACCAAGAGCACCAGGTGGAGCTGGAGCTGCTCCGGGACGACAACGAGCAGCTCATCACCCAGTACGAGCGAGAGAAGGCGCTGCGCAAGCACGCAGAGGAGAAATTCATTGAATTTGAAGACTCTCAAGAACAAGAAAAAAAAGATTTACAGACCAGAGTGGAATCTTTAGAATCTCAAACAAGACAACTTGAACTCAAGGCCAAAAACTATGCTGACCAGATTAGCAGACTTGAAGAAAGAGAAGCGGAACTGAAGAAAGAATATAATGCTTTGCATCAGAGACACACTGAGATGATCCATAATTATATGGAACACTTAGAAAGAACAAAACTTCATCAGATCTCAGGGAGTGATCAACTAGAATCCACAGCTCATAGTAGAATTAGAAAAGAACGTCCTATATCGTTAGGGATTTTCCCTTTACCTTCTGGAGACGGATTGCTTACGCCTGACACTCAGAAAGGTGGCGAGACCCCTGGATCAGAACAATGGAAATTTCAGGAATTAAGTCAACCACGTTCTCATACCAGTCTGAAGGATGAACTTTCCGATGTTAGCCAGGGAGGATCTAAAGCCACCACTCCAGCGTCGACAGCTGCTTCAGATGTGGCAGCAACACCTAGCGATACTCCCTTACATGAGGAGAACGGAGGGGTTGTGGAGGTTGCAGATACACCCGATAAGTCAGAGATAAGCAAGCATATCGAAGTACACGTAGTCCAGGAAACTAGAAACATAGCAACGGGTTCTGCTGAAAATGAAGAGAAGTCAGAAGTTCAGGCAATCATTGAATCCACTCCTGAGTTGGATATGGACAAAGATCTCAGTGGATATAAAGGCTCAAGCACTCCCACCAAAGGCATAGAGAACAAAGCTTTTGATCGCAATACAGAATCTCTCTTTGAAGAACTGTCTTCAGCTGGTTCAGGTCTAATTGGAGATGTGGATGAAGGAGCAGATTTACTAGGAATGGGTCGTGAAGTTGAAAATCTCATATTGGAAAATACACAACTATTGGAAACCAAAAATGCCTTGAATGTAGTGAAGAATGACTTGATAGCAAAAGTAGATGAACTTACCTGTGAGAAAGATGTGCTGCAAGGGGAGCTGGAGGCTGTGAAACAAGCCAAGCTGAAGCTGGAGGAAAAGAACAAAGAATTGGAAGAAGAGCTTAGGAAAGCTCGTGCAGAAGTTGAAGATGCAAAGCAAAAAGCAAAAGATGATGATGATAGTGATATTCCCACAGCCCAAAGGAAGCGGTTTACTAGAGTAGAAATGGCCCGAGTTCTAATGGAGAGAAACCAATATAAAGAGAGATTGATGGAGCTTCAGGAAGCTGTTCGATGGACAGAGATGATTCGTGCGTCAAGAGAAAATCCAGCCATGCAGGAGAAGAAAAGGTCAAGCATTTGGCAGTTTTTCAGCCGACTTTTCAGCTCCTCAAGTAACACTACTAAGAAGCCCGAACCACCAGTTAATCTGAAGTACAATGCACCAACCTCTCACGTTACGCCTTCCGTCAAGAAAAGAAGCAGCACCTTATCTCAACTCCCTGGGGATAAGTCCAGAGCCTTTGATTTCCTTAGCGAAGAAACTGAAGCTAGTTTAGCCTCACGGAGAGAACAAAAGAGAGAACAGTATCGTCAGGTAAAGGCCCATGTTCAGAAGGAAGATGGTAGAGTGCAGGCTTTTGGCTGGAGTCTGCCTCAGAAATACAAACAGGTAACCAACGGACAAGGGGAAAATAAGATGAAAAATTTACCTGTGCCTGTCTATCTCAGACCTCTAGATGAAAAAGATGCATCAATGAAGCTTTGGTGTGCTGTTGGAGTCAATTTGTCTGGTGGGAAGACCAGAGATGGTGGTTCTGTTGTTGGAGCAAGTGTGTTTTACAAGGATGTTGCTGGTTTGGAAGCAGAAGGCAGTAAACAGCGAAGTGCATCTCAGAATAGCTTAGACAAGTTAGACCAGGAACTTAAGGAACAACAGAAGGAGTTAAAAAATCAAGAAGAATTATCCAGTCTAGTCTGGATCTGTACCAGCACTCATTCAGCTACAAAAGTTATCATTATCGATGCTGTTCAACCAGGCAACATCCTAGACAGCTTCACTGTTTGTAACTCTCACGTTCTGTGTATATCAAGCGTACCAGGAGCCCGAGAAACAGACTACCCTGCAGGAGAAGAGCTTTCAGAATCTGGACAAGTAGACAAAGCATCTTTATGTGGAAGCATGACAAGCAATAGCTCAGCAGAGACAGACAGCCTGTTGGGAGGCATCACAGTAGTTGGTTGTTCTGCAGAAGGTGTGACAGCAGCTGCCACTTCCCCTAATACCAATGAACCTTCTCCAGTGATGGAAAAACCGCCAGCAGAAGAAGCAACTGAAGCTACAGAAGGCAATGCAGGATCAGCTGAAGATACTGTGGATGTCTCCCAAACTGGCGTGTACACAGAGCATGTGTTTACAGATCCTTTGGGAGTTCAAATCCCAGAAGACCTGTCACCAGTATATCAGTCAAGTAATGACTCAGATGCATATAAAGATCAAATATCAGTATTGCCAAATGAACAAGACCTGGTGAGAGAGGAAGCCCAGAAAATGAGTAGCCTTTTACCAACTATGTGGCTTGGAGCTCAAAATGGGTGTTTGTATGTCCATTCATCTGTAGCCCAGTGGAGGAAATGTCTCCATTCTATTAAACTTAAAGATTCGATTCTCAGTATTGTACACGTGAAAGGAATTGTGTTAGTGGCCCTAGCTGATGGGACCCTTGCCATCTTTCACAGAGGAGTTGATGGACAGTGGGATTTGTCAAACTATCACCTGTTAGATCTTGGACGACCGCACCATTCCATCCGATGCATGACTGTGGTACATGACAAAGTTTGGTGTGGCTATAGGAACAAAATTTATGTGGTTCAGCCAAAGGCCATGAAAATAGAGAAATCATTTGATGCACACCCCAGGAAGGAGAGCCAAGTGCGGCAGCTTGCCTGGGTGGGTGATGGTGTGTGGGTCTCCATTCGCTTGGATTCCACACTCCGTCTCTATCATGCACACACTTATCAGCATCTGCAGGATGTGGACATTGAGCCTTATGTAAGCAAAATGCTAGGTACTGGAAAACTGGGCTTCTCTTTTGTGAGGATCACAGCGCTTATGGTGTCTTGTAACCGTTTGTGGGTGGGAACAGGAAATGGTGTCATTATCTCCATCCCATTGACAGAAACGAATAAAACATCAGGAGCATCGGGAAATCGTCCTGGAAGTGTCATTCGAGTATATGGTGATGAAAACAGTGATAAAGTGACACCAGGGACATTTATACCCTATTGTTCAATGGCACATGCACAGCTTTGCTTCCATGGGCACAGGGATGCTGTGAAATTTTTTGTGGCTGTCCCAGGTCAAGTCATCAGCCCACAAAGTGGCAGCAGTGGTACAGATCTGACAGTTGACAAAGCAGGGCCATCTGCACAGGAGCCTGGCATCCAGACACCCTTGAAGTCTGTGCTTGTCATTAGTGGAGGAGAGGGCTACATTGACTTCCGAATGGGTGATGAAGGTGGAGAATCAGAGCTTCTTGGAGAGGATCTTCCACTTGAACCTTCTGTCGCCAAAGCAGAAAGGAGTCACTTGATAGTGTGGCAAGTGATGTATGGTAGTGAGTGAACCCATAGGACACAGATGGCAACAGGGAAGCCATCTCTTCTGCATGGTTTATTTTCCCTTTATTTAATGGTCTCTTTGTGAAATAAGTTTCACCACATAATGTGTGAGCATTTTTTTCTGTTAACTTTATACTATAAAATCTGTCCTGCTGTAACAATACAGGAGCTAGCTGTTTTACTGCACCAGTGTTATAGGCAATTTCAGTATATTATGATCAAATCAAAGAATGTTTACTTTCTGCAAACTGGCAAATTTTAGAAAGCAATCCAGATGTGGTTTACTCTTGCACAGTTAATGTCACTTACTTCATTTGATGGGGTCACTTTTTAGCTGTCACTAATAATGGAATTAATGGAAATACTTGATATATGAAACTGTACCATTAAGTACAATAGTAAAGTTTCTCCCAATGTATTATAAAATTGACACAAACTAATGTTAGGTGGATTATCAGGATTTATCTAAATGTCCCTAGAGGGCTAAAAGCTAACTGTAAATTACTCTAACTTTCATTTTCAAATCTGACAAATCTTGTTTATATGGTATATAAAACTTTGTTTTCATCAGATTTTGTGGGGGGTGGGGTTTTATATTAAAGAAATTAAGACTACACTATTTAAATAAAAATTTCTTGTTTCTGACTTATTAGAGCTCTAAAGTTTATGGGGCCTGCTTTTCTGAATATTCTACTTGATTTTTTGTTTTTGAGACTGGTGTCACTCATTTTCATACTGACATATTTGAAAGGTTTATTATTTAAAAGGCTTAGAAGATGCACTTCAGCAATGGAGGATTTTTTTTTTTAAGGAAATTGTGGTTTGGATGTCTTACACGTTGGTGTAAGATGGTGGTGGTTGGATGAGTTTTTTTCCATGTAAAAATTTCACTTGGTTACCAGTTGTTCTTTGACTGCTCTTACCAGTTAATAAGAGTAAAGCCTTAGTGGTGATGGAGTATGGCCTAATGAACTGAATGAGTGATTTGCTTAGCAGTGGTATTTTCTGTTCTGTATAAAACTATATAACTGCCCATACTTGATAATCGGTACATAAATGACATTTAAGCTTTTATGCCCTTTTGAGATTAAAATGCCATTTTCAAAGAAAACTTGAAAGAGAAGCCAAAATAGCATAAAGTAAAAGTTGACATTACATCTTTTCACTCACAATAGAGTGAAAAATAAGAGTCTGGGTTTAACTGACTTTCTTGTTTAATAAGTTTTAAAAACCATTAAGCTATAGTTTTTCTTCCCCTCTCAGACTTCTTGAAAATGTATGATTTACCATTCTTAATCCATCAGTTTAAGCAAAACTAAGTTTAAGTACTAATTTAAAATATAAACTTATAGGACAAAAGGGCCGCCCCCGCCCTGCCCCACCCCAAGTCCGAAGGACTGCTTCAGGAAAAGGAAGCAGCAAAGGTCTCAGATTGTCTCAGCATCCTAAAGGACCAAGTACTTTACTTCTGAACTGTAGTGGAAAGATATTTGTAAAAAGTACCACCAGTATGTTTTAAACATATAGATGATTAGCCTAGATTATAAAGTACATAGGATTTAATACATCAGAGGGGGCCTTTGGATACATTTGGTCACGTGTCTAGAAGCACATTTTATACACAGTACAATTTTCCCACTTTAGATGCCTAGGAGGAAAAAAATTCTTGGTAAAAGCTTTAGGAAAAGGATAATTTTTTAACTTGAACTACTTAGTCACTTTTTTCAAGCCACCAAAACTTAGGTCACTTTTCCATAGCTTATAAGTTATGTTTTTACTGATACTTTATTTTAAATCTGAGCCATTGCTGGCAGTACCTTAAAATAAAAAATCACATCATTAAATGTTTTGGGAGAATGTTGTATAAAATTCACAAAAAAAGAGACAGCCAAATGTTTGAGAATTTTAATCCCAAGAAGTAAACATCCTAGAGTCAGACCCCACATGCTGTTCAGTCTTTTACATGTTTCTATGACTGAATGTAATTTAGGAAATCAGGAGTTAAAAATGAAAAATGCAAACATGTTACAGTGGTTGTTTATTATTGCTCTTTATAAACTTATTGGCTTTAACTTAAGGAATATAGGTGTGTAGTTATTTTATCTAAAGCTGTCAGATGTCTGTGGCCCTGTTAAACTTCAGGGACTAGAGAGAGTACAAAAATGCCTATACAATTTGTTTTAAGAGCTTGTCTTTATATTTGTAATTTCAGTTCTATATTTTCTACAGATTGCTTGACTTCCACCTTTTCTCCAACAATAGGTTTATATTCTTGTAGTGTTCACTTTGGTCAAGGTGGTAACCTTTGGTAGAAAATGCCCAAGTCTGAGTTTCTGCCAGCAGCGAGCAGTTGGTTTAAACTGCTGATAGCTACTCCATCAACGGTAGAGAAGAGGCTTGAGTACCTTGGGTTGGTCTCTCCATGTAAGAAGAAATTACCCCCGTTGGAAGAAATAAGGAATACTGAGGATTTTCTCATTTTGTCACATTTGGCTTACGTATGTCATTGAACCATGTAAAATTGCCGATATTCAACCATTGCCGATCTACAAAAATGACAGTATCATATGCATCAACCTAACACTCACTGCTCGATGCAGGTTAAAATCCCTGTGAGGCAAGGGGAGAAGATTCTTTAGGAACTCAGTTTTGAATGTTTTTCTCTTAACTCATGTGGATCTAAAATTTAAAAATAGGAATGAATGTCTTAATAACTACAGCTTGTTGAGAGTGTGAAACATTTTGAGCACAAAATATGCAGCACATAACTTTTCACATGAAGTGTGTTGCATAGAAAAGGTTAAAATACATTCTCTGAGTTGCTGTGGTGTTCATTTCTTGTAAAGGTCTTCCTTCATTTGAGATTAGAACCTTTAAATGGCTGCCTTAGTGACAAAACAAAGCAAAACACTTGTCTCATAATCAGTAACTGTCCTAAAGAACGTGTGTCTTGCAAATGCTGTAGAACTGAATATTTATTTCCTTGTGAGTATTATGACCATTACCAAAGGATTCAGTCAGATTTAGGGCTCTTCTTAATGGATCATGTTGAGAAAGGGACTCATTTTGGTCCCAGTTTGTAAAGGGAAGAGAAGAGAGAATTAAATGTGGAAATCATAAGTGCTTTTCTAACAGGGTTATGCTATTTTGTAACACTAAATGTCTTTTCCTTTTTAAAAAAAAAAAATAAGTTTTTATTATTAATTTTGTCATATATTTCTCAACATTATTTTAACTGTTTTATGGTCTGAATTTGTCTTTTGTCCTAGACATCTTATTTGGAATTTTATTTGCCTCTATAATCTTAAAAATGGGTTCTAGAGTATCCCACTTGCTATTTCTTTAGAGGCTGATGCTTCATTTCTATGAGCAAAAAGCTCATTTGGCAATGTAGTTATTTCAATATTTATTTCTATTATGGAATCCCTGGGGTTCGGAATGTAACTTTGTATATGAAATATATATATAAATATGTATATGAAACATGTATGAGGAGTGTGTTTTGTTTTGTTTTTGCTTTTCCCAGGGGTCTGACCTTGATTTATATTTGAAATGCCCAATCATCCCCCATCAAACATGTCATTCCAAGGGTCAGGATTGTCGCCATTTGGTATCGGCTGAAAGTGAGCAGTGAGGAATACATGAAGAGCATGTTTGCTTAGTGCACGTGTTTAAGTGACAATGTGAATAATAGACAGTAAGGCTTTCTAGAAGTGTGGGTATGCTGAGTAACAACCCACACATGATACTGAGGCATTTGCCAGATCACTCAGTAATAAGAGGAAGGCTATAATGTAGATGTTAATACAGTGTGCTTATTGTGATCCGTTTGCTTGCGAGAGACTCTGGAACGAAGGGTGAGTATAAAACTAATCACGTGGTAGCACAATGTGAACCCAGTGCAGTGGTATGTAGTCTAATGCCGTGTTCTTTGTTTATAAGAATGTGGGGTTCTAACAGGATAGTAAAAAGTAGTCCTGATT EMBV3_22852 TCCTGGGGACCATTGTCATTCATGGATGTGTTTGTGGACTTTACCTGGGAAGAGTGGCAG Gene GeneID:506621|ZNF268:NM_001083646:99_cdna Constitutive 0 NULL GeneID:506621 17 GENE ZNF268 MGC157087 zinc finger protein 268 EMBV3_34058 CCATCAGCCACTCTGAACAGAAACGGAACCCCCGTATGATTCACTGTTTTCACTTGGAGC Gene GeneID:615098|RPP30:NM_001035461:42_cdna Constitutive 0 NULL GeneID:615098 26 GENE RPP30 MGC128711 RNASEP2 ribonuclease P/MRP 30kDa subunit EMBV3_19453 GCTATTATTAGAAAGGCGCTCATGGGTAAATATGATCAGTGGGAAGAGCACCCGCTCAGC Gene GeneID:100337057|LOC100337057:XM_002694565:604_cdna Constitutive 0 NULL GeneID:100337057 17 GENE LOC100337057 NULL nuclear receptor co-repressor 2-like EMBV3_28400 TTCTACATGGAGGACTACCTGACGGTGAAGACAGGCGAGGAGATCTTTGGCACCATTGGC Gene GeneID:520388|PRMT1:NM_001015624:259_cdna Constitutive 1 NULL GeneID:520388 18 GENE PRMT1 HRMT1L2 MGC134042 protein arginine methyltransferase 1 EMBV3_31460 CTTTTGTCCAGTTGTGCAAATCCCCCACTTTTTCTGTGAACTCAGTCAGGTGGTACAACT Gene GeneID:785898|LOC785898:XM_002688656:44_cdna Constitutive 0 NULL GeneID:785898 7 GENE LOC785898 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_06942 CCGGAGTCATTTTTCACCCAATTTGATGCTAAGGTGGTCTTCTGCTCCGTCAAAGAGGCG Variant GeneID:505512|SAE1:NM_001081711:127_cdna 453^695 2 EMBV3_00531 GeneID:505512 18 GENE SAE1 MGC151535 SUMO1 activating enzyme subunit 1 EMBV3_14761 GCTGCAACTAGAGATTCTGCATGTGGCAAAGAAGGTCCCACGTGCCACAACTAAGACCCA Gene BVV0102_302908 + 0 NULL GK000020.2:37048888-37066114 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113824 TCONS_00113827 TCONS_00113817 TCONS_00113823 TCONS_00113825 TCONS_00113818 1 XLOC_069127 Coding TCONS_00113817 XLOC_069127 Coding Coding NUP155 20:36999111-37052185 j TSS85051 7576 1 TCONS_00113817_5 1449 0.152719112988384 36 0.85793152827238 0.00141575142577336 0.00145840232660394 0.000550997626298598 0.000180368596259598 0.000535190921985715 3.21070433858495e-05 0.000146647819240039 0.00024094023595499 1.80556347082151e-13 3.96827753736073e-11 0.000390546537401596 5.80359705056497e-11 3.50188935520855e-05 5.85414836734841e-08 2.04175027265503e-13 0.00101816005444333 8.76520783017566e-17 0.00143105742381419 0.00202050799302621 0.00213689950357909 0.000633030527064554 9.87891230414423e-103 0.000894116155150999 0.000222467941495185 0.00177695952481838 0.00106622560474775 0.00121406892622716 0.000249883217814255 2.55248672300449e-29 1.98600981146376e-53 NM_001192107.1 NUP155 Bos taurus nucleoporin 155kDa (NUP155), mRNA. 0.0 7741 100.00 0.566393875395987 NM_153485.2 NUP155 Homo sapiens nucleoporin 155kDa (NUP155), transcript variant 1, 0.0 6179 91.64 0.571541710665259 TCONS_00113817_5 sp|O75694|NU155_HUMAN NU155_HUMAN Nuclear pore complex protein Nup155; 0.0 2761 96.26 0.95928226363009 2 coding 0 0 0 0 0.127483627626711 0.452850064340938 0.0798246508306536 0.182360329580491 CCCCTTCCCAGCTGCCAAATTAGATGCAAGCTTCAAATTCCCCACCCGATGAACCGGAAGTGCGTCATGCAGTGGCGCCGGGGCGGTCCTTTGGCGCGCGCGCTCTAAGCTTTGGGCTTGAGCTAGCGTCTTGGGTTTTGTCTTATTTCTCCTTGCTTTTTGACTTTCTCCGGTCGCTGTTGTCTTCGATTTTGGATATGCCGTCTTCTTTGCTGGGGTCGGCGATGCCGGCCTCCACGTCGGCCGCAGCCCTGCAGGAAGCTTTGGAAAATGCGGGGCGGCTCATCGACCGTCAGTTGCAAGAAGACCGCATGTACCCGGACCTTTCCGAGCTGCTCATGGTGTCTGCTCCAAATAATCCCACTGTTTCTGGCATGTCAGATATGGATTATCCCCTGCAAGGACCTGGCTTGCTGTCAGTACCCAACCTTCCAGACATCAGTTCCATCCGAAGAGTTCCTCTCCCACCTGAACTTGTTGAACAGTTTGGACACATGCAGTGTAACTGCATGATGGGCGTGTTCCCTCCCATCAGTAGAGCTTGGCTCACCATCGACAGTGACATATTCATGTGGAACTACGAAGATGGAGGAGACCTTGCCTATTTTGATGGGCTTAGTGAGACTATTCTTGCTGTGGGGCTTGTGAAACCAAAACCTGGCATCTTCCAACCTCACGTACGACACCTCCTGGTTTTGGCAACCCCTGTGGATATAGTGATTCTTGGACTCAGCTATACTAATTTGCAAACAGGTTCAGGAGTTCTCAATGACAGTATGTGTGGTGGAATGCAGTTGCTTCCAGATCCCTTATATTCTCTTCCTACTGATAATACTTACCTTTTAACAATAACTTCCACCGATAATGGCAGAATTTTCTTGGCTGGAAAGGATGGCTGTTTATATGAAGTAGCATATCAAGCAGAAGCAGGTTGGTTTAGCCAGAGATGTAGGAAAATAAACCACTCAAAGAGCCCGCTTTCTTTCCTTGTTCCTTCATTACTACAGTTCACATTCTCAGAAGATGATCCTATTGTTCAAATTGCAGTTGATAATTCAAGAAATATTTTATATACACGATCTGAGAAAGGAGTAATACAGGTGTATGATTTGGGCCATGATGGACAAGGAATGAACAGAGTTGCCTCAGTGTCACAGAATTCTATTGTCTCTGCTGCTGGTAATATTGCTAGGACCATAGATCGTTCTGTTTTTAAACCAATTGTTCAAATAGCAGTGATTGAAAACTCCGAATCACTGGACTGTCAATTACTGGCTGTCACACATGCAGGTGTAAGGCTGTATTTCAGCACTTGTCCGTTCAGACAGCCATTGGCACGGCCTAATACACTGACACTGGTCCACGTCCGCCTGCCTCCTGGATTCTCTGCATCTTCAACTGTGGAAAAGCCTTCAAAAGTACACAAAGCTCTTTATAGTAAAGGTATTCTGCTGATGGCAGCCTCAGAAAATGAAGATAATGATATTTTGTGGTGTGTCAACCATGATACATTTCCTTTCCAAAAGCCAATGATGGAAACTCAGATGACTACTCGTGTTGATGGTCATTCCTGGGCTCTTTCTGCAATAGATGAGTTGAAAGTAGATAAGATTATCACACCCTTAAATAAGGATCATATTCCAATAACTGACTCACCAGTTGTTGTACAGCAGCATATGTTGCCTCCCAAGAAGTTTGTTCTCCTCTCAGCACAGGGGAGTCTTATGTTTCATAAACTTAGACCTGTGGATCAACTGAGGCATCTACTTGTGAGTAATGTGGGTGGAGATGGAGAAGAGATTGAAAGATTCTTTAAATTACATCAGGAAGACCAAGCTTGTGCAACTTGCCTTATTCTTGCTTGTTCCACTGCTGCCTGTGACAGAGAAGTATCTGCTTGGGCTACTCGGGCTTTCTTCAGGTACGGTGGTGAAGCACAGATGAGATTTCCAACCACTCTCCCCACTCCGAGTAATGTCGGTCCCATCCTGGGCTCTCCTGTCTACTCTAGTTCTCCTGTTCCTAGTGGTACTCTGTATCCAAATCCATCCTTCTTAGGGACACCATCTCAAGGTGTTCACCCTCCTGCCGTGTCTACTCCAGTGTGTGCTTTGGGAAGCCCGGCAACTCAGGCCACAAGTATGAGTTGTATGGCTGGACCAGAGATCGTGTACTCTGGAAAACACAATGGTATTTGCATTTACTTTTCTCGAATCATGGGAAACATATGGGATGCTAGTTTAGTTGTGGAGAGAGTATTTAAGAGTGGCAACAGAGAGATCACTGCAATTGAAAGTAGTGTTCCCTCCCAGCTGCTGGAGTCAGTGCTACTAGAACTGAAAGGCTTACAAGAATTTCTAGACAGAAACTCCCAATTTACTGGAGGACCATTAGGAAATCCAAATACTGCTGCCAAAGTACAGCAGAGGCTGATAGGATTCATGCGTCCTGAAAATGGAAATACTCAGCAGATGCAACAGGAGCTGCAGAGGAAGTTGCATGAGGCTCAACTGAGTGAAAAGATTTCACTTCAGGCAATCCAGCAGTTGGTTCGAAAATCATACCAGGCTCTGGCTTTATGGAAACTTCTTTGTGAACATCAATTCACTGTTATTGTAGGAGAACTTCAGAAGGAATTTCAAGAACAGTTAAAAATCACCACCTTTAAAGACCTGGTAATCAGGGACAAGGAACTGACCGGGGCATTAATTGCTTCTCTGATCAACTGCTACATCAGAGATAATGCTGCTGTTGATGGCATTAGTTTACACTTACAGGACATCTGCCCACTTCTTTATAGCACTGATGATGCAATTTGTTCTAAGGCAAATGAGCTTCTCCAGCATTCCCGACAAGTTCAAAATAAGATTGAAAAGGAACGAATGTTAAGGGAATCCTTAAAGGAGTATCAGAAAATCAGCAATCAGGTGGACCTATCCAGTGTTTGTGCTCAGTATAGGCAAGTGCGTTTTTATGAGGGTGTGGTGGAGCTCTCTCTCACTGCTGCAGAAAAAAAAGATCCTCAGGGTCTTGGACTTCATTTCTATAAACACGGAGAACCAGAAGAGGACATCGTAGGACTTCAGGCTTTCCAGGAAAGATTAAACAGTTACAAGTGTATTACAGATACACTTCAAGAACTGGTAAATCAAAGTAAGGCTGCTCCTCAGTCTCCCAGCGTCCCCAAGAAGCCCGGGCCTCCGGTGTTGTCATCTGATCCCAACATGCTGAGTAATGAAGAAGCAGGACATCATTTTGAACAAATGCTTAAATTGTCTCAGCGATCCAAAGATGAACTCTTTAGTATTGCCCTTTATAATTGGCTAATACAAGCAGACCTTGCAGATAAACTGCTACAGATTGCTTCTCCATTTCTGGAGCCACATCTAGTACGAATGGCCAAAGTTGATCAAAACAAAGTTCGTTATATGGATCTACTCTGGAGGTATTACGAGAAGAACAGAAGTTTTAGCAGTGCAGCTCGTGTCCTGTCCAAATTGGCTGACATGCATAGCACAGAAATTTCACTTCAGCAGCGACTCGAATACATTGCTCGGGCCATTCTTAGTGCCAAAAGTTCCACTGCCATTTCATCAACAGCTGCAGACGGTGAATTCCTTCACGAATTAGAGGAAAAAATGGAAGTTGCCAGGATCCAACTTCAGATACAAGAGACACTACAAAGGCAATATTCCCATCATTCTTCTGTACAGGATGCAATTTCTCAGCTGGATTCTGAACTAATGGACATAACTAAGCTTTATGGGGAGTTTGCTGACCCATTTAAACTTGCAGAATGTAAACTTGCAATAATTCACTGTGCTGGTTATTCAGACCCTATACTGGTGCAGACACTTTGGCAAGATATCATAGAAAAAGAACTAAATGAAAGTGTGACGTTGAGCTCCCCAGACAGGATGCATGCTCTTAGTCTCAAGATTGTGCTCCTGGGCAAGATATATGCCGGCACGCCTCGCTTCTTTCCTCTCGATTTTATCGTGCAGTTCTTAGAGCAGCAAGTTTGTACTTTGAACTGGGATGTGGGTTTTGTGATACAGACAATGAATGAAATTGGAGTGCCATTACCTAGACTACTGGAAGTATATGATCACTTGTTCAAGTCACGGGATCCATTCTGGAACAGAATGAAGAAGCCACTACACCTTTTGGATTGTATACATGTACTATTGACAAGATATGTTGAAAATCCTAGCCAAGTTTTAAATTGTGAGAGGAGAAGATTCACAAATCTCTGCCTGGATGCTGTTTGTGGTTATCTGGTCGAGCTCCAGTCAATGAGCTCCTCAGCAGCAGTACAAGCCATCACTGGAAACTTTAAATCTCTTCAGGCTAAACTAGAACGGCTACATTAATTATTGGAGATGCTGTTTTCCCTCATCATCCACCTAACTCTTCTTTGTCGTGGGACTACTGATTCCTTTAAACTGGTGGTTCTCAAAGTGTGTGCACCAGACCAGCACATCAGCAGCATCTGGACATTTGTTAGAAATTCCGATTCTCCAGCCCAGCACTCTGTTTTAATGCCCTTCATGATGTTCCAGTACATGTCAGGTTGAGGACCACTGTGTTAGAAGATATAACCAGTTCAGGATGGAGCTTCCCATCTGATGCCTCCTCCCTTGCTCATCAGTAACCACAACACCTGAGGTTTACCCAAGACACACCATATATGAAGCAAAACTGTTCATAATATAGTTCCTAATATTCCAGCAGAATTAGGATGGCAAAACCAAGTGCCCAAAGTCATGGCAACAAAAGAGAAAAGTCTGGCGAGTGACAAGGACTCACAGAAAAACAAGAACATGGACTCCTTTCCTCTTACCTTTCGTTACCAGAGTAATGACCTTCTACCTGTTGTCACTAATGTATGTCTAACGGTTTTCCCATCTCCACAGTTATTCTCTTAGAATTTAGCTCCCTTTCTCCTATAGTCTCCTTATTTATAATATTTAATAGGATGTTAATACCTTCTTATTAGGCCCCACCACCTCTCATTTTTCAGCTTTTCAGTTCCTTAAGTTTAGATTTTTTTTAATATGTAAAATGAATGTATGCTACACATTGTTAATTCTGTAAATTTAAAATTCTATCATGTCTACTTAAAATGAAAGTCTTGGCTTAAAGGCTATATTTAGCCGTGATTCCAGTTCTGCTACAAGCACATTTACTCACAAGAACATTAATATGTATGTTAAGTTTATGGAACTCAAAATAATGAAGCTACATCTTTCATAAGGAATGTAAGCTAATGTGGCTAAATGGTCTTTAAGAATCCAGAAATCTGAACCATTTCTTTTGTTTATGTAACACCTTACATAACACCTTTAAGAACTCTAGCCACATAGCGAATGTTTTCAATATCCTTTGGAGGGTAAGAGTACTAAGAGAAATTAAGATCCTCTTCTCCTCTTTAATCATCTGGGAGACTGTAAAACCTTAACATTCGTAAGAATCACTTCAATAACCTGTTCAAAACAGATATTCCACCTTCAATGTGATAATGATACTGGTAGTAAGTGGATCAAACTTGAAGTAGCGTTGTATCACATTTATCAACTTGGTTTATATACTTTATATCTGGTTTTCATTCAACACATTATTTATAGTGACTATTAAATATTAAACATCTATAGACAATGAATGATAAGTGGAATATATGAAACAGTGCATTCATTGTAAGCAGTGAGGAGTCATTGAAAGTCCTGATTGTGACACAGATTTCTAAATAGATCATTTTAGTGTAGCAAAATGGTTAAGAAAGAGAAAGGGCTGTTTGGGGGACTTCCTGGTAGACCAATGGTTAAGACTCCAAGCCCCCAGTGCAGGGGTAGGTTCCATCCCTGGTCAGGAAACTAGATCCCACATGCTGGCTGCAACTAGAGATTCTGCATGTGGCAAAGAAGGTCCCACGTGCCACAACTAAGACCCAGTGCAGCTAAATAAATACAAAAAAAATTTTTTAAGAGAAATGTTTTTTAACTGTACAAGGTATGGGATATTAGTCCTGAAATGTATGTTCAGCATTTCTTTAGTATAATACATCTGACTTACTAGTGACTTGTTTGTTGAAAACCTCTCTGCTCTCATCTTTTATGTTTTATAGTTGACTTCATCTCAGGGCTCACAGATTCCTCATTCTCTTCTCAGGATACTTCCCTCCTCCATCCTTTTTCCTCTTATTCATGAGGGGGAAAATATGATAGGGATACAGTTGTATCAAGGAAATAAAGAAATAGAACACTGAATCTAAATGTCTTGAAAGGCATATGCTTTCCTTCCATTTTTTATCAGTTTTTTCATTTAAATTCCCTTAATAATTTTTTTCAGAATATTTTTGAGTCTTCTGATAAATCATTTAAACTCTTGAAAGTTTTATTTTGCTTATCAGGAAAGTTTCCTCATAAGGAGGTTGAAGCCAAGTGATAAGACTTTTTTAAATCCAAAAATTTGTAAGAGCTTATGTAATCTATTTTTATTATTTTGTTGTTCTGCTTCACATATTAGTTAAAATACTATTGTTTTTACTCTTCTTCCTTTTGGATGAACATACCTACTGTATTATGTTAGAAATTAAACATTTATTTTAGAACTTAGCTATGGAAGAATAACTCTTTTTAAGATTAATCAAGGGGACTTCCCTGATCGTCCAGTGGTTAAGAAACCACCTGCCAATGCAGGGAATACTAGTTCAATCCCTGCTCCAGGAAGATCCCACATTGCACTGAGTAACTGAAGCACATGAGCCAAGAGCCCGTGCTCAGCAACAAGAGCCCATGCAGTGAGAAGCCTATGCACAATAAGAAAGAGTAGCCCCTTGTTTGCTGCAAATACAGAAAGCCCACACTCAGCAGTGAAGACCCAGTGCAGCCAAAAATTGTTGCTGTTCAGTTGCTCAGTCATGTCTGACTCTCTGCCACCCCAGGGACCATAGCACACCAGGCTTCCCTGTCCTTCACTATCTTCTGGAGCTTGCTCAAACTCATGTCCATTGAGTTGGTGATGCTATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCCGCGTTTAGTCTTTACCAGCATCGGGGTCTTTTCCAGTGAGTCAGCTCTTTGTATCAGGTGGCCAAAGTATTGGAGCTTCAGCATCAGTCCTTTCAATGAATATTCAGGACTCTCAGAGTCTTCTCCAACACCACATTTCAAAAGCATCAATTCTTGAGCATTTAGCCTTCTTTATGGTCCAATTCTTATATCCATACATGACTACCAGAAAAACCATAGCTTTGACTATACAGACCTCTGTTTTTTTAATACACTATCTAGGTTTGTCAGTTTTTCTTCCAAAGAGCAAGCGTCTTAATTTCATGGCTGCAATCACCATCTTCAGTGATTTAGGAGCCCAAGAAAATAAAGTCTATCACAATTTTCAATGTTCTGCCATAAGGATGGTGTCATCTGCATATCTGAGGTTACTGATATTTCTCCCAGCAATTTTGATTCCAGCTTGTGCTTCATCCATCCCAACATTTCACATGATGTATTCTGCATATAAGTTAAATAAACAGGGTTACAATGTA EMBV3_22221 CTGGGAAGGTGCTCTTGCTGCTCTCAACTTTGGAGATTTTTCTTCCTATTTAAGACCTTT Gene GeneID:538314|TBCCD1:NM_001083730:105_cdna Constitutive 0 NULL GeneID:538314 1 GENE TBCCD1 MGC140323 TBCC domain containing 1 EMBV3_29551 GGTTCGGCCGGGGGCTGAAGGCCGCAGTCGACGAAGCCCGGGAGGAGTTCCTGGACCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36345 TTAACTGAAGGCAAAAGTGTACATGCATTTGGGAGGGTGGGACTGAGCATGGGAACAGGC Gene GeneID:521037|RIC8A:NM_001015627:8_cdna Constitutive 0 NULL GeneID:521037 11 GENE RIC8A MGC139893 RIC8 resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) EMBV3_36179 ATCCGCGGCTGGTGCATTGTGGGAAAGAAGCAGACGTGTCCCTACTGCAAAGAGAAAGTA Gene GeneID:540607|RNF121:NM_001102245:25_cdna Constitutive 1 NULL GeneID:540607 15 GENE RNF121 MGC148368 ring finger protein 121 EMBV3_37071 TGCCTGACAGCAATGCACAGGGTTCACATCTCTTCACATCCTCACTTAGCTTCTGTTAGG Gene BVV0101_031234 + 0 NULL GK000022.2:50892475-50912975 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00091 GGACCAGCCAAGGAAACCCCCAGTGAGAAAAAACTGTCAGAATCCAGCATATCACTGTCC Gene GeneID:100137976|LOC100137976:XM_002696958:101_cdna Constitutive 0 NULL GeneID:100137976 22 GENE LOC100137976 NULL similar to mCG127065 EMBV3_12803 CCCCAAGGGGCTGAATCCTGGGAAAGCTATTGCTGAAATCAAGAAGATGATGGCAACCTA Gene GeneID:286840|SDHB:NM_001040483:42_cdna Constitutive 1 NULL GeneID:286840 2 GENE SDHB MGC127046 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) EMBV3_19218 GTATTGCTCCTGGGACTAAAAGATAAAGAGGTACTGCTAAAGTCAGACAGCCCAACAGGT Variant GeneID:532555|GOLPH3L:NM_001099052:124_cdna 190^321 1 EMBV3_02285 GeneID:532555 3 GENE GOLPH3L MGC166159 golgi phosphoprotein 3-like EMBV3_19551 GCCAAGGGCGATGGGCATTAACTCGTTTTATCCTTCCAACAACATGTGCATAGAGCCTGG Gene BVT0102_034967 - 0 NULL GK000011.2:73935364-73976999 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32906 AGGCGGGCGTGAGTGTGCGCGTGTGTTCGTGCTGAGCTTCTGTTTCATATCGCAAACGTA Gene GeneID:511840|SAPS1:NM_001114507:160_cdna Constitutive 0 NULL GeneID:511840 18 GENE SAPS1 NULL SAPS domain family, member 1 EMBV3_08550 GGTCAGAGCCTGTCGAGAACTCGCACATGTTGGTGCCTGAACCTCACGTTCTCTTGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35494 GTCTACCGGGTGTCTTCTCCCTTGAGATAAGCCCCTAGTTACTTGTACCACGTGTAAGTC Gene BVV0102_115268 + 0 NULL GK000018.2:1875886-1910951 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085161 TCONS_00085166 TCONS_00085164 TCONS_00085162 TCONS_00085165 TCONS_00085163 1 XLOC_051811 Coding TCONS_00085166 XLOC_051811 Coding Coding GLG1 18:1906797-2091098 j TSS63670 8395 1 TCONS_00085166_7 1376 28 0.954601193705914 0.000492402995284188 0.00133262741636292 0.00129130876588229 0.000312466086910679 0.000590036345482859 0.000939045391085527 0.000577092157898233 0.000757329048053369 0.000932354214586228 0.000279788260745306 1.36961923091651e-05 3.17640696972286e-68 8.69867037371061e-05 0.000230992602277205 0.00018490352440192 0.00109288054797817 0.00010331441445807 0.00238006897848749 0.0020376311068315 0.00178888428836008 0.000230190466216961 0.00198420438095173 0.000538566938329117 0.00108620632647546 0.00126436176997343 0.00150727938837408 0.000153763165261383 9.30256838354768e-05 0.000131108181468511 0.00035420986556051 XM_005218324.1 PDPR PREDICTED: Bos taurus pyruvate dehydrogenase phosphatase regulatory subunit (PDPR), transcript variant X1, mRNA. 0.0 1.005e+04 100.00 0.663847528290649 NM_012201.5 GLG1 Homo sapiens golgi glycoprotein 1 (GLG1), transcript variant 1, 0.0 3844 90.15 0.335437760571769 TCONS_00085166_7 sp|Q61543|GSLG1_MOUSE GSLG1_MOUSE Golgi apparatus protein 1; 0.0 1695 94.44 0.678779069767442 3 coding 0 0 0 0 -0.0267178196058463 0.794666126777451 -0.000626258330521559 0.992767294436043 GCGGACTCAAGATGGCGGCGTGTGGACGTGTACTGAGGATGTTCCGCTTGGCGGCGGCGCTGCCGCTGCTGCTGCTCGCGGCGGACGGCGCGCAGAAAATCCAGGGCCCGGGTGGCCACGGCCAGGGCCCGGGCCCGGGGAGCAACCTTCTTCCCCTCGGAGCGCAGCCGGGAGGCGGCGTGCTGCCGGGTCAGCTCCTGCTGCCTCAGTCATCTCAGTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCTCAGCAGCAGCAGCCTCAGCAGCAGCAGCAGCCGCCGTTCCCCGCGGGCGGGTCTCCGGTCCGGCGGGGCGGAGCAGGGCCCGGCGGGGCTGGCGGGGGCTGGAAGCTGGCGGAGGAAGAGTCCTGCCGGGAGGACGTGAGCCGCGTGTGTCCCAAGCACACCTGGAGCAACAACCTGGCGGTGCTGGAGTGCCTGCAGGACGTGCGAGAGCCTGAAAATGAAATTTCTTCAGACTGCAATCATTTGTTATGGAATTATAAGCTGAACCTAACTACAGATCCAAAATTTGAATCTGTGGCCAGAGAAGTTTGCAAGTCTACAATATCAGAGATCAAAGAGTGCGCTGATGAGCCATTTGGAAAAGGGTACCTGGTTTCCTGCTTGGTGGATCACCGTGGCAACATCACCGAGTACCAGTGCCACCAGTACATCACCAAGATGACAGCCATCATTTTCAGTGATTACCGGCTCATCTGTGGCTTCATGGATGACTGCAAAAATGACATCAACATTCTGAAATGCGGGAGCATTCGCCTTGGAGAAAAGGATGCACATTCACAGGGCGAGGTGGTATCATGCTTGGAGAAAGGCCTGGTGAAGGAAGCGGAAGAACGAGACCCTAAGATTCAAGTCTCTGAACTCTGCAAGAAAGCCATTCTCCGGGTGGCAGAGCTGTCCTCTGACGACTTTCACTTGGACCGGCATTTGTATTTTGCCTGCCGAGATGATCGGGAACGTTTTTGCGAAAATACACAAGCTGGTGAAGGCAGAGTATATAAGTGCCTCTTTAACCATAAATTTGAAGAGTCCATGAGTGAAAAATGTCGAGAAGCACTAACAACCCGCCAGAAGCTGATTGCCCAGGATTATAAAGTCAGTTATTCACTGGCCAAATCCTGTAAGAGTGACTTGAAGAAATACCGGTGCAACGTGGAAAACCTTCCCCGGTCCCGGGAAGCCAGGCTTTCCTACCTTCTGATGTGTCTGGAGTCAGCTGTGCATAGAGGGCGGCAGGTGAGCAGCGAGTGCCAGGGGGAGATGCTGGACTACCGCCGCATGTTGATGGAAGACTTCTCTCTGAGCCCCGAGATCATCCTGAGCTGCCGAGGGGAGATCGAGCACCACTGCTCGGGGCTGCATCGGAAAGGGCGGACCCTGCACTGTCTGATGAAGGTGGTGCGGGGGGAGAAGGGGAACCTTGGAATGAACTGCCAGCAGGCGCTTCAAACACTGATTCAGGAGACTGACCCTGGTGCAGATTACCGCATTGATAGAGCTTTGAATGAAGCTTGTGAATCTGTAATACAGACAGCCTGCAAACACATAAGATCCGGAGACCCAATGATCCTCTCATGCCTGATGGAACATTTATACACAGAGAAAATGGTGGAAGATTGTGAACACCGTCTCTTAGAGCTGCAGTATTTCATCTCCCGAGATTGGAAGCTGGACCCTGTCTTGTACCGCAAATGCCAGGGAGATGCATCGCGTCTTTGCCACACTCACGGTTGGAATGAAACCAGTGAACTTATGCCTCCCGGAGCTGTGTTCTCCTGCTTATACCGCCATGCCTACCGCACTGAGGAGCAGGGCAGGAGGCTCTCACGGGAATGCCGAGCTGAAGTCCAGAGGATCCTCCACCAGCGTGCCATGGATGTTAAGTTGGATCCCGCCCTCCAAGACAAGTGCCTGATCGATCTGGGAAAATGGTGCAGTGAGAAAACAGAGACCGGACAGGAGCTTGAATGCCTCCAGGATCATCTCGATGACTTAGCTGTGGAGTGCAGAGATATAGTTGGCAACCTCACTGAGTTAGAGTCCGAGGATATTCAAATAGAAGCCTTGCTGATGAGAGCCTGTGAGCCCATCATTCAGAACTTTTGCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATTCAGAACAAACACCAGAAGGATATGAACGAGAAGTGCGCCGTCGGAGTCACCCACTTCCAGCTGGTGCAGATGAAGGATTTTCGGTTCTCTTACAAGTTTAAAATGGCCTGCAAGGAGGACGTGTTGAAGCTTTGCCCCAACATAAAGAAGAAGGTGGACGTGGTGATCTGCCTGAGCACCACCGTGCGCAACGACACTCTCCAGGAAGTCAAGGAACACAGGGTGTCCCTGAAGTGCCGCAAGCAGCTGCGGGTGGAGGAGCTGGAGATGACAGAGGACATCCGCCTGGAACCAGATCTGTATGAAGCCTGCAAAGGTGACATCAAGAACCACTGCTCCACTGTGCAGTATGGCAACGCGCAGATTATTGAATGTCTGAAAGAAAACAAGAAGCAGCTGAGCCCTCGTTGCCACCAGAAAGTGTTTAAGCTGCAGGAGACAGAGATGATGGACCCAGAACTAGACTATACGCTCATGAGAGTCTGCAAGCAGATGATAAAGAGATTCTGTCCAGAAGCAGATTCCAAAACTATGTTGCAGTGTTTGAAGCAAAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGCTCTGCTCTATGACCTGAAGGTTCCCCGTTGGGACTTCCAGACTGGAAGGCAGTTACGCACCTCTCCTCTCTATGACCGGCTGGACGCGCAGGGAGCCAGGTGGATGGAGAAACATGGATTCGAGAGGCCAAAGTACTTCATACCACCAGACAAGGACCTCCTGGCCTTGGAGCAGAGCAAGACTTTCTACAAGCCAGACTGGTTTGAGATTGTGGAGTCCGAAGTCAAGTGCTGTAAGGAAGCCGTGTGTGTCATTGACATGTCCTCTTTCACAAAGTTTGAAATAACATCCACCGGGGATCAGGCATTAGAAATTCTCCAGTACCTCTTCTCCAACGACCTTGACGTGCCCGTGGGCCACATCGTGCATACCGGCATGCTCAACGAGCGTGGTGGGTACGAAAATGACTGCAGCATAGCCCGGCTGAGCAAGCGCAGTTTCTTCATGATTTCTCCAACCGACCAGCAGGTCCATTGTTGGGCTTGGCTTAAGAAGTACATGCCAGAAGACAGCAACCTGATTCTGGAGGATGTCACCTGGAAATACACTGCCCTCAACCTGATTGGTCCTCGAGCTGTAGACGTGCTGTCCGAGCTGTCCTATGCCCCCATGACTCCAGACCACTTCCCAAGTCTGTTTTGCAAGGAGATGAGCGTGGGCTACGCCAATGGGATCCGGGTGATGAGCATGACGCACACGGGCGAGCCGGGGTTCATGCTCTACATCCCCATAGAGTACGCCCTGCACGTATACAATGAAGTGATGAGCGTGGGGCAGAAATACGGAATCCGGAATGCTGGGTATTACGCTCTTCGTAGTCTCCGAATTGAGAAGTTTTTTGCCTTCTGGGGTCAGGACTTAAACACCCTCACCACACCCCTGGAATGCGGAGGAGAGTCTCGGGTGAAGTTAGACAAGGGCGTGGATTTCATCGGGCGCGACGCGCTGCTGCAGCAGAGGCAGAATGGGGTATACAAGCGCCTCACCATGTTCATCCTGGACGACCACGACACAGACCTGGACCTCTGGCCGTGGTGGGGGGAGCCCATTTACCGGAATGGGCGGTATGTGGGCAAGACCACCAGCAGCGCCTACGGCTACACCCTGGAGCGCCACGTGTGTCTCGGCTTCGTGCACAACTTCTCCGAGGACACAGGGGAGGAGCAGGTGGTGACAGCGGATTTCATCAACCGGGGAGAATATGAGATTGACATTGCAGGACACCGGTTCCAGGCCAAGGCCAAGCTGTACCCGGTCCCCTCCCTCCTCACCCACAAGCGCCGGAAGGAGGACGTGGAGCTAAGTGACTTGCACGGGAAGTGAGGCCGGGGGGCCTCGCTGCCACCCCTCCTTCTCACCATCATAGGGGCTTTTCTCCTCCTCCTGACCCCTCCCTCTTCTTGAGTTAAGCTTGGCCTCCCATCTCTTCTCTCCTGGTAGACTTTTTCCGCTTTTAACTCTCCCTTTGCTCCCTCCTCTCTCCCTCCATCTCCTCCTCCCCCTGCGTCTCCCATCTCCTGATACTCTGGGCTGGTCGCCACTACTCCACCTCTCAGGTTCCCGTGGTGGCAGAGGATAGGAGCAGACTCCTTGTGAGGTGGGTTGTGCTGACAGCCTGACTTCATGTGCTGTGTCTTGAAGCAAGGCAGGCTGCAGGCTAAGTGTCCATCTCCGTGGAGCTGTTTCCTTGGAAGAACCTGTGAATTCTGTGGGTTGCCGTCATGGAACAGCTTATGCCTTTCAGCCGGGCAGGTCGTCCTCCCGTTCCTTTGTGCTGCGGGTTGGCTCCGTGAGCCCTCTGTCAGGAGGATGACCACCTACCTCGCTGATGAGAGAGGCATCGTGAGGGCAATACCTGGGGGTTAGCAGAGATAAACAGTTAACCCTCCTGGGTCTCCCCACTGACCCAGTTATCAGACTGTTGGGCAAGCACCACCTGCCTGTAAGTTTCTTCATCTCTTGCTAACCTCTACAGTGAGGGGGTTTTGGTTGGTTTGTTTGACTGAGTAGACAAGTAAGCCACACTGTTTGAAGAGAAAGGCCAGTTTGCCTTCTGGGTTGCTTTTCCCAGCTGACAGAGTCTGACCTCAAAGTACAGCTCAGCAATGCTGAGTCTTCTAGAAACAGTGCTGCTTTTCCTTCAGCTCCTCACAGTTCAGTCACCCCACCTTGATGATCCTCTTCTCCAAGCCCACGCAACTTTCAGGTCAGCCTCCCATGTCCCTGCCACAGGAGCCGCTGGCTCAGCAGACCTTCTCCCCATTTAGAGCAGGGCAAGGGAGACAGGCTGGGCACCCTGGTTGAGGGAGTGAGCCTGGGGCCATGTTGAGTGGGCGGGAGCCACTGGGACCCCGGGTCTGGCTTCCCCTACAGAGAAGAGAGAGAGCCACATGGAGGTGCCCTCTGCTCCCAGTGTGGGGAGAGTGTGTTACCTGAGCCCAAGGTCTGCTTCCATCTTCTCTTTCCAGCCATCTCTCCACATCTTCTGGAATAGAAAGCGACTGGGGTAAGAAGGCCCTGCTCGCTTTAAGCATTGCCTGTGTTTGCTTAAGATCTCCCGGACTATGATATCCATCCCCACATGTCATTTCCCCTTGCAGACAAATTGCTGCTAGAGACTTGAACCGTAGCCTTTGGTGTCTTGGCTGCCTTAGTCCTGACAGGTCTGTAAGTATATTCAAGATGATCCTTTCATGTTATTAGAGAAGCTTAAACTTCTCAGATCTCTGCCTACTCTGGCATTTCTCTGGGATTTCTGTTTACCCACTTGATCACTGACTTCAGTGTCCACCTTCTTACAAGGTCTTCACTGATTAATGAGGGAGTACATGATTAGAAATCTGTTGGGGGTTTGGTATTTTGATGTAAATGTGTATTTAACGAGTTGAGAGATGCTGCTTCCAGGCAGAGAGGAGGGGTGCTGCCCAGCTGGAGAGCACAGAACAGCAGTCATGAAACTTGAGGGAGCAGGACATGAGCCCTCGCCAACGCAGGTGTTGGCCGGCTGACTGACCCAGGAAGATGGAGACTGATGTAGAACTAAAGGTATCCCATGCTCGGCACCACTGCAAAGTTGTCTTTATAAATTAAAATTTATTTGGGACTGAATCCAAAGGAAACTCTAGATTTTAGATTTATGTGTAAAGTACGAGATGTTAAGATTCTGGGGGCAGCACTTGTTTTTTGAGTGCCCTGAAACTTACGTATTTACCTTCTGGCACTTTACATTCACCCTGGAAGTCTCCTTTGTTTCATTGAAATAGGCAATATGAATCTGGTAGGTTTCTCTGTTTGGTCCTAAACTGAAGAGAGTGACTCTTTCCTGCCTCAGGCATGGTTGACAATCAAAACATCCTCATTTCTGTATCACTTCCTTGGGGACTGGACCCGTGACAACTCATCTCTTTCTTCCTGGAGACTCGAGGGTTTGTTGAAGGGGTGGCTGGACTCTTTGTTTTAGATGGATGAACTTTCTTCTCTGAAATGATTTGTCTTGCGAGAGGGGGTCCACAATCTTCTCAGCATATTCAGTTGAATCGTTTTGAACCTAGAAATACAAAGTGTGTTGGCTTCAAACAGATGGAGAATCCAGGCTGCAAGTCTACCGGGCGTCTTCTCCCTTGAGATAAGCCCCTAGTTACTTGTACCACGTGTAAGTCCCATGGTCATGTGATTGACGTTGAAGATTTCTTGTCTGTGATGAAAGCTCTAATTGAGAAGGTTTTCACACACAAAAAAAGGGACAAGAAACCTACCTGCCTGGGTAGCCCATTTGATGTCTCTTAGCTTGTGTTTTGGTCACACAGCACTGCGTGGGCAGGACGTGCTCCAGGAGACAGAACCAAACAGTTCCCACAACATTCAGGTGCTCTTCTGGGGAGTCCCTGTACCCCCTAAATGCACGCTATGCCATTTAGCCTAGTGATTAACCCCAGTCTCACCTTGGCCCCAGAGTTCCCATTTCTACTGGAGCAGCACCAAGTCACTTCTGCTCTATTCTCTTCAGGAGGCATGCAGTCCTTGGACTCTACCTCCTTGTACAGACCAAGAGTTTTAGCTGCATCTCTTCTTTCCTGGGCTGTTGCTTCCAAGAAAGTAACGAAACGTGAAGAATAACTCTTCAGCTTGCTTCTTTCCCCTGCCTTTGCATGCATTGGAGATGTTAATCCTGTCCCCCACCACCACATGTGTGGCTGGAGTGACAGGCACTTCTGAAAAGTGATTTTGTGTCACTGAAGAGATGACCCCCCTCCTTGATTTCCGCCTCCAAAACCACTATATCAGCTGGCTTTCAGGCATTAACTACAAGGTCCTTTTTGTGTCTCTTTGTTGCCTCTTGGCCAGTGTAGTCAGCAAGGATCGTCTTTAGTATCCAAGGTAGAGATCTGGTCAACAGTGTTGAATACTCAAGTACAGCCTACTATTTCCTTTCTTTCTGCACATCCATCCACACTCATCCCTCACAAACCTTGATATGAGCAGCATTTTCTCAACATCATACAGAGGAAGTTCCTCCTGAGCGAGGACTCTTCCTCCTGCACGTCATGTGCAGGCATGTGGCCTCAAGCACAGCGGAGTGGGAGAGAGAGACGGCAGGTGAAGTACACAGCAGTGACCAGGCCGGGCAGTGAGTCCTGAGGGGACTAGGGCTCCCCTGTGAGCATGTGCCCCACACCCCTGCCACTCTGTCCTCCACGTTATGGTGCTGAGTTAGCTGTAAGGCTCCTTCATTGTCACTCTGGGGCTGGCATCTGCAGCCCCTCACCACTACAGATACACTATTTTTTAAGAGGACTGAGTATTTTTGTATGTCTTTGCCTTCTCTTTGTCCATTAAACACGAGTTGTTCCTTGTATAATATGATTCTTCTCTGAGCAAAACCCTTGGAGAATTAACACATTTCTTCATGGGCCATTTTTCTCATGATATTTAGATACACCTGTTTTTATCCTTTGCAGACTTCCTCCCTTCTCATTTTTCTGTCTCTCAAGGACAGAAATTATAAGTCATGGAGGGGATACTTTTAGCACCTGTTTCAACAGATTGATGCCAGGATTCCCTTTGCACACCAGGAACTGGGGCTTGGGGCCCTCCTCCACCCAGCCATGTTCTAGTGCCTTACACTCCAGAGCGTCACACGGCGGGCAGAAACAGAAGGACCTTCAGCAGGCAGGTGTGGTGGGGTTGAAAGCTTCCACAGCTCATTCCAGTGAAGGGTTTTCCAGCAGCACAGCTAACACTACTCTCTGGTCAACCCCTGGGATGTATGAAAACGCCACGGTAACTAGTGTAACGGCTACAAATCATTCTTTGCGTTTGTAAATGTGCAGTTCAGCTCAGCCCTTTCCCACCCCTGTCAGCATGTGGTCCTGCAGCTGTGCGAGGCCCTTTAGTAAACGGGATCTTTCTCCTGCACCCTGGGGATGACAGGCACCCAGGGTGACTGAGCGTTTCTGCCCCCGTGAATGCGGCATTAACTTTGTGCACTGTGTTTCTATCAAGCCAGATTTCAATTAAGGTTTTCTTTTCATGTTACTAAGTTTGTAAATGAATAAACATTTTCTCTACTCTTGCTA EMBV3_35407 ATCCTTCTGGGAAGGGGGAGCACCTGAGAAGCACAATCGAGGGGCTTGGCCTTCGCGTCT Gene GeneID:514460|PPP2R4:NM_001046173:94_cdna Constitutive 0 NULL GeneID:514460 11 GENE PPP2R4 MGC128874 protein phosphatase 2A activator, regulatory subunit 4 EMBV3_26289 GGGTCCTACAGAGATAGCTACGACAGTTATGCTACACACAACGAGTAAAAATCCTTCCTG Variant GeneID:507120|CIRBP:NM_001034278:35_cdna 583^930 3 EMBV3_15697 GeneID:507120 7 GENE CIRBP MGC127049 cold inducible RNA binding protein EMBV3_41067 GAAGGTGGAGCGGCAGAACTCCTGAACAAGGCAACAGATGCATTGGATGAGAAGTCAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28145 GGTGGCCTGTGGGCAACAACAGGGAAGGTATTTTCTCATTGCCTTTACGATGAGAGACAC Gene BVV0101_059551 - 1 EMBV3_04202 GK000013.2:10879785-10934395 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11481 ACTACTGTGTCAGAGAGGCCCTTGCAGTGAGATCCAGATGCAGCCAATGCCATAGTGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05097 CTCATGGCCCAGCAGGATCCAGAGCCCCACGGAAATTACCTCCATCTTTTCAGACTACTA Gene GeneID:767965|MGC133880:NM_001077033:35_cdna Constitutive 0 NULL GeneID:767965 5 GENE MGC133880 NULL hypothetical protein MGC133880 EMBV3_12785 CCCGCGAGAGGAAGACCGTAGGGCTTTCAGGTAGCATGGCTCAGGGCCTGATTGAAGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16273 GACATTCCCTGAGGTCAAAGTTTTCTTGTATTGGAAGCAGTTGGGTTTGCAAGGGCTGCC Gene BVT0102_168215 + 1 EMBV3_11620 GK000029.2:23767672-23839044 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179222 TCONS_00222879 2 XLOC_108995 XLOC_136186 NonCoding TCONS_00222879 XLOC_136186 NonCoding NonCoding - 7:89227210-89227947 - TSS166877 737 1 TCONS_00222879_1 53 1 0 0.00100050954617857 0.000680194781469593 0.000358178751575428 0.000236093707988426 0.000207682062341614 0.00175745203406771 0.000141101285319088 0.000526441520476249 0.00022001869013716 5.01480140787329e-05 0.000272777559993907 3.91437802596728e-05 9.99643011264801e-05 9.85954701675827e-05 0.000128820724260436 0.00685152228902861 0.00135763161361362 0.010688372337922 1.49958050059485e-05 0.000166281691307434 0.000344559041449137 0.000279289637509927 0.00390081107915644 0.00517535055852645 0.00011556201151511 0.000390061449422375 0.000203759167545689 0.000207418548725291 0.000279905694800211 3.26974145228294e-05 XR_235597.1 LOC101907604 PREDICTED: Bos taurus uncharacterized LOC101907604 (LOC101907604), 0.0 1175 99.10 0.902306648575305 0 noncoding 0 0 0 0 -0.0409444288977897 0.696907786851441 0.0714231620702196 0.222086856962468 CCTTCACCACGGGCTCCCGGTGAGCCCCGCCCCCACGCCCGGTTCCAGGAGAGCCTCTGGGAGCTCGCTCCCGCCGCCCGGTGAAACGGGAGGACAATCCATCCAGCCCACAGAGGCAATCCAAGCTGTCTAGAATTCAGGGATCAAACGAGGGCTACGGAAAGGAAAGACGACCTGACCTAGGAGGGCCATGATATTCTATAGAACCGGACAAAGTTGGTTTCCAAGGAAACTTGATTCCTTGGAACTCGGAAAGCTGGTTCTTTTCATATGCAATTCCAAACCATGAGCTCCTTCCCAAAGCCTGCCTGGCCGCCAGCCCCACCCCCCACTCCCCAGAAAAAACGGCTCAAAGAAATCTTTTCCATCTCAGGCGGAAAACTGGAAGATGTCTTGTCTTGTCTGTCTGGATTGATGTCTGTGTCAGTGTGAGCCTTGTGATTTTTGATAATAGTGCTCAAGTTCTGAGTTCTTATTTCAATGGTCTCAAGACAAGGCAGCCCTTGCAAACCCAACTGCTTCCAATACAAGAAAACTTTGACCTCAGGGAATGTCAGAGTCCCGTGAACTGGGAACTAGTCAATATGAAATATCTAGTAGTTTTCTTTTTGCTCCTCTACTGTAGACATGTCTAAGAGTCATCAACAAGAAGCACAAAATGTTCATAGTGCCTCGGTTTGTTCTAAGGTAAAAATTGTAATGTCGTTCTATCTGTCACAAGCTTGTCAACGAGAAAG TCONS_00214501 . 5' 53055 TCONS_00214501 . 5' 53055 EMBV3_15115 AGCATCTGGATACAGAGTTCCAAAGAATAGCAAGAAGAGATAGGAAAGCCTTCCTCAGTG Gene BVV0102_049038 + 0 NULL GK000030.2:20578874-21138853 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229872 TCONS_00233637 TCONS_00221089 TCONS_00115943 TCONS_00186704 TCONS_00220641 TCONS_00064985 TCONS_00201862 TCONS_00107708 TCONS_00087258 TCONS_00038827 TCONS_00228679 TCONS_00021272 TCONS_00057020 TCONS_00224123 TCONS_00049630 TCONS_00074096 TCONS_00142118 TCONS_00151311 TCONS_00022792 TCONS_00023496 TCONS_00162598 TCONS_00018793 TCONS_00253330 TCONS_00203184 TCONS_00166291 TCONS_00202789 TCONS_00231952 TCONS_00042304 TCONS_00177587 TCONS_00089514 TCONS_00087257 TCONS_00219110 TCONS_00250850 TCONS_00056175 TCONS_00039303 TCONS_00037823 TCONS_00190633 TCONS_00248828 TCONS_00239779 TCONS_00174992 TCONS_00199328 TCONS_00253634 TCONS_00010687 TCONS_00129742 TCONS_00109588 TCONS_00079500 TCONS_00001358 TCONS_00243251 TCONS_00040414 TCONS_00249246 TCONS_00249932 TCONS_00103962 52 XLOC_139366 XLOC_143119 XLOC_134405 XLOC_070112 XLOC_112756 XLOC_133958 XLOC_039709 XLOC_123507 XLOC_063618 XLOC_052422 XLOC_022648 XLOC_138563 XLOC_011945 XLOC_034821 XLOC_137419 XLOC_029761 XLOC_045855 XLOC_086543 XLOC_092080 XLOC_013462 XLOC_014163 XLOC_099479 XLOC_009475 XLOC_156270 XLOC_124124 XLOC_101129 XLOC_124030 XLOC_141440 XLOC_025637 XLOC_107361 XLOC_054298 XLOC_132429 XLOC_153793 XLOC_033978 XLOC_023120 XLOC_021652 XLOC_116668 XLOC_151771 XLOC_146444 XLOC_104775 XLOC_120981 XLOC_156573 XLOC_006238 XLOC_078455 XLOC_065492 XLOC_048385 XLOC_000334 XLOC_149914 XLOC_024230 XLOC_152189 XLOC_152875 XLOC_062257 Coding TCONS_00103962 XLOC_062257 Coding Coding FUCA1 2:129638581-129675555 j TSS77092 15864 4 TCONS_00103962_8 296 0.777483610690872 7 0.571119465555946 9.58301993040671e-06 7.0226409432705e-06 3.72718102982318e-06 7.33428896104204e-07 2.22527708928583e-06 7.29542218685469e-07 2.23710201478346e-06 1.96533382589847e-06 4.69533556800188e-05 0.00290853485070645 0.00127736666806175 0.00120136721506769 0.000117151086821339 0.000502192223588732 0.000106889657761381 0.000749852684804383 0.000420876629757607 0.000315068496661332 3.77831904372298e-06 4.36638651697694e-06 1.58155108253888e-06 0.000371665285292572 0.000778012919004639 0.00121529918500092 5.06354619558212e-06 5.26446350722493e-06 6.90176631448386e-06 0.000918821026505258 0.000987651664006992 0.00144417022774021 NM_001046035.2 FUCA1 Bos taurus fucosidase, alpha-L- 1, tissue (FUCA1), mRNA. 0.0 2262 99.92 0.0791729702471003 NM_000147.4 FUCA1 Homo sapiens fucosidase, alpha-L- 1, tissue (FUCA1), mRNA. 0.0 1083 79.34 0.0791729702471003 TCONS_00103962_39 sp|Q2KIM0|FUCO_BOVIN FUCO_BOVIN Tissue alpha-L-fucosidase; 9e-165 468 99.12 0.991189427312775 0 coding 0 1 1 1 -0.0212614535372905 0.87694091507073 0.00690133909469129 0.923020389504902 CTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGAAAGAAGGACAAACTTTTTTTCCTTCTCTACATTCCTTAGGATTATATAACAATAATGTATCCTGCCTGAGGACAGTCTCTGGATTAAGGACAGTCTCTGGATTAAACCTTCTGGCTAATTCTGATATCCTAAAATGTAAATTATGGGAGTAGACCTGGTCTTTACAAGGATTATATAACAATAATGTATCCTGCCTGAGGACAGTCACTGGATTAAGCCTTCTGGCTAATTCTGTTATCTTAAAATGTAAATTATGGGAGTAGGTCTGGTGAGGTCTTTACAACCTCCAGACATTCTTTGGATTCATTGGAGAGTATATAACTTCATTGCTAACACTAGCAAGTGGGTACTCTTTCTGCCCTCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTGTTACACAAAAGCTCTGAGAGATCATGTTACACAAAAGCTCTGAGAGATCAAGCCTTGTCTCTGGCCCCGGATTGAATTCTTCTCCTCCGGGGGCCAAGAATCCCGGTGTCTTCATGTGATTCAACAACAACCTTTCATCTTGAGGGCTCGTCCAGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTCTAGTTCTTTGTTCTCTTAGTGAACACGTTTTCTGCCATGCTTTATTAACTCTACGGTGTGCTTGTGTGGATGAATGACATGCCCTGCGTGAAGCAAGTAAGGAGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTAGGGGGTTTATACCAACCAGCCAATGCCAAGAGGCACCCAATGTCTCCTTCGGGAACCGACCAGAAATGGGCAAAGTGTGTGGACCAAACTCTCCTTTCTTGGTCAAATTTTCGGTCTCTTTGACCATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAATGGATGTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGCGCCTAGCCTCGCTAGGAATCAAAAGTTCAGAAGCTAGATGGAGCTCTAGCTCCAAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCTGGCTCTTAGTGGATCAGAGGAGGCTCTTATACTGGTGTGGTGATGCTTGGAAAGAACATATCAGTTTTATGTTTGTGTCGGTCTTATTGTGGTCAGGAAATACTCAGGGTAGTGCACAGGCACTCAGGTGACAAATGTTTTCCCCAGTGGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTGCACCCCAGGTGGCTTCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACGTCAAGTAGGGATGCTATCAGGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCAGGAGGGACGAGTACAGCGCCTGCATCGGTAAGGGGCAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAAAGTCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAATGGCGCTGGTCGCTTTTTTTCTTTTTTATAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATGTGACCCTCAGGGCTTAAAGAAGACACACCTGGTCGTCCTATGTGATACTGCATGGCCACGGTATCCATTGGAGGACGGCGAACGGTGGCCAGTTGGAGGGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGTTAGAAGTAGTGTATGTATTGCCCTTTTTCCCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAACCTTCAGCTCCCTCCTGTCCTCCTACTTTGCCCCCGTACCTGGGGCTCCAAGCTGAGAAAACTGAAAGCCAGAGAACCCCCCTCAGAAGGGTTGCCTTGGTCTCAGTGGAAATCCAAACTGAGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTATCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATTGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAAGAAAAACTGGTTTCTCAAATCTATCCCTGGGATCATATGTGCAAAGCAGCCAGAGAGACTGAGAAACAGCCACACAAGCTGTTGCCTCTTTATGAAACACCCACCGGGAGAAACAATCAGTCTGTGAGAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACGATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGATGTGATGTATATCTTGGGGACAAACGCTGACTTCCGAGTCAAAGACTCAAGTTTTGGGAAAAGCGGTTGCTTATGGAGATGAGTGGCTTGGTAACGAATCAGTAGGGAAGAGGGAGAACGAGATAGGGGCCCTCCCCACTGGGAATCAGGTGGTCCCAACTATAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGTCATTTTGTTAGATGTATTCTTGAAGGACTTTGGCAGGTGCGTTCTAAGCCTTTAAACTATGGCAAATTAGCAGACATAGAACAGGAGGAGAAGGAAGCTCCTGGTAAACTCCTAGACAGACTAAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCTGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTTGGCTCCAGATATCCGCCATAAGCTATTAAAATGGGAATATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACGAAGGAAAAGGTGGAAGCCTTTGCCATGGCTATGAAAAACGTTCTTAAACATCCTGAGAAAAATGCCCAGAGGAACCCAGGTGAAAAGGGATGGGCTTGCTACTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCCGCAAAGGACCACACTGGAAGAGAGACTGTCCCCAGAGGTGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTGAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCTGGGTATTAATAATTGTGGGGGGCCAACCCATCGATTTCCTTTTAGATACTGTGCTTACTACTGAAGCCCCTGGCCCACTTTCTTCCCGAATTGCTTCCATAATAGGACTGTCTGGACGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTAGGATTCTGTGCTGTTTTCACACGAGTTTCTGATCGTGCCAGAATTTCCCTCACCCCTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGGGTATGAGCTGATGGAAAATCTGTGGGCCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCGCACGTATTCCCACATAAGAAGCAGTATCCACTGAAACCTGAGGTTAAGGAAGGGTTAAAACTCATCATCGAAATTTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTGGGGTATAAAGAAATCAAATGGTAAATGGAGACTAGTTCAAGATTTACAAATAATAACTGAGGCTGTAGTTCCTTTACACTCCGTGGTGCCTAATCCTTATACTCTATTGTCTGAAATTCCTGAACGAGCCAAATATTTTTCAATAGTCGATTTGAAAGATGCCTTCTATTCGGTGTCTTTGGCAGAAGAAAGTCAATTTCTATTTGCCTTTGAAGACCCTACGCAGGAAGCTTCTCAGTTAACCTGGACAGTTTTGCCTCAGGGATTTCGTGACAGTCCTCACTTATTTGGACAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCGGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGGCTGTGGTTACAAGGCATCAAGAGAAAAGGCTCAGCTGTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGAACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAACCATCCCCTACCTATTGAGAGGATTTTTGGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTATGGGGAACTTGCCCAGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAAGTCAAAAGGCTTTAAGATTCCTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAGTTTGTCACTGAAAGAAAAGGTGTGGCAATGGGAGTTTTGACACAACCCCGAGGACCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAATTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCATCTGAAGCTTTAAAAATAATTAATAGACGAAAACTTACTTTACTGACTTCTCATGTGAGTGGAATCTTAAATTCTAAGGTTACTATTTGGATGACAGACAGTAGGCTTCTTAAATATCAGTCGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTTCCGTCCTGAGAAGGAAAATGAAACACCTGGTCATGATTGTTCTCAATTCCTAACTTTAAACTATGCAGCTCAGGAGGATCTAAAGGATACCCCATTAGACAATCTTGACATGGAAATATTTACAGATGGCAGTTCTTTTGTTCGGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTTCCCCAGGGAACCAGTGCTCAGTTAGTGGAGCTCGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAAGGCAGCGGATGGGCCTGATAATCTATGTGAGTACTTCTGCTGACTCCAAAAATCCTGAGTCTGCCGTTTGATCCTCAAGACAGTGCCTTCCTATTCTGGGCTCACTCCTACGCTGCATTCCACAATCGGTCTAAATGCTGGGTCTGTGGAGCACTCCCCTCTTCATCAGTGGAAGGCTTCCGGAGGTGGACATCTCCACTTCAAGGAAAAGACTTTCTCAAAGTCTGTGAATACCTTCGACAACAATCACATGCTATGCCTCTTCTTCATCTGAACCCTAACCCTAACCCTAAAATGGACTGGTGCAACACGTTGCACTTTAACTATGGACATAATGTGACTTTTAATTTCGATTTTTAACTTGTTTTAATGACTATGTTGCCTGCATCTGTAACTGTGTAACTGGACTTGTTTCCAGCCGCATGAATGCTTTTAAGTTACAAATGGTTGCTCAAATTCCTGCTACTGTTGCAGCTTCCTCCAACTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGCAGTTACGGAACGAGAATGACGCCCCTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGAGTCATTTCCTAGGCAGGTTGATAAGGAGTCTAGGGGTCCCCAAGGAGAGAAGGGTCTGGAATTCTCAAGGAGAAAGAAGGACAAACTTTTTTTCCTTCTCTACATTCCTTAGGATTATATAACAATAATGTATCCTGCCTGAGGACAGTCTCTGGGTTAAACCTTCTGGCTAATTCTGTAAATTATGGGAATAGACCTGGTCTTTACAAGGATTATATAACAATAATGTATCCTGCCTGAGGACAGTCACTGGATTAAGCCCTCTGGCTAATTCTGTTATCTTAAAATGTAAATTATGGGAGTAGGTCTGGTGAGGTCTTTACAACCTCCAGACATTCTTTGGATTCATTGGAGAGTACATAACTTCATTGCTAACACTAGCAAGTGGGTACTCTTTCTGCCCTCTTCTGATGCCTATGTCAGAAGCTGTCTCTATCTCCTTTATACTTTAATAAAACTTTGTTACACAAAAGCTCTGAGAAATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCGGTGTCTTCGTGTGATTCAACAACAACCTTTCAAAAGCTGAACGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATGCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGACCACCTCCTTCGAAGAGTTAACATTGGAAAAGACTCTGATGCTGGGAGGAATTGGGGGCAGGAGGAGAAGGGGATGACAGAGGACGAGATGGCTGGATGGCATCACTGACTCGATGGACGTAAGTCTGAGCAAACTCCGGGAGTTGGTGATGGGACAGGTGCTGGGGTCCAGCCCCGGTGGATCCAGGGAATTCTAAGTAGGGAGGGTGTCGATCAGGAAACAATAGCTTATTTAAATGTTAATTAAAGATATGAAGAGTGGTTAAATAAGGATAGCTCAGCGAAGAAATTCAGTGAAGAAAAAAAGAGGCTGAATAACTTGGTTTACATGGAAAGCTAATAAAATTCCAAGACAAGGAATTTGCGTCACCTACGTAGGCCGCAGGCATCCTCCCATTCTCCCGAAGGAGAGGAGACACTAAGGCGTCCCCAGTCAGATCTTAGAAGCCCAGGCATAATTAGTAGGCTTGACGAGCCTCCAGATGGGAATTCAGCCAGAAGGTGAGAGAAAGAATGACATGGGGAGACCAAGCTTCGGTGAAAAAGGCCTGCACTTTATTTTCCAAACTAGTTTTTAATACCTTAAGTTGTGCATAAAGGATAATGGGGGAAGGTCAGTAGTCCTTGATCCTTACCAAAGCCAGGCTTTCAAACATATCATATGCAAAAGTTTAGGTGATTTACATCATCTTCTGGCCAGGGGGCCTGTTAACATTTTATGACCCTTTCTTCAGAAAACTTGTTTTTCTCTAAAGGTGATTATTCTAAAGTCAGGCACCACCCTCTGAAAGCATTAGATAAAGTTGCATTCCTATAGGGCAAAGGTGTGGTGGGCTATAACAAGAAAAGAATTAACTCAAGGGTCCAAGGTCACAAACATTAAAGCTACTACTTACATTCCTATACACCAATTATATTAATCAATACACTGCCAGGGACACAGTGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAAACCCTTCACCAATACAATTTCTAATCAATCTTCTAACTGCTCAAAGGAATCCATATTTAGACAGTTTAGAACATCTCATGCCTCTCACGGTTGGGAGGCTGTGAACAATCACATGTGGCCGGAAGAACCTGTTCAGGCTGGCTAGAGGACTTCCAAAGGAGTATATAGGTTGAAACACTCTTGTCACGCCCAGGAACTTTATTAACTGGAGCTGTAAGTTAACTTTTTCAGAGAGAGGTGGTGGGGGACAGCCACCCATAAAGTCAGAGGTGTAGGTGAGAGCACAAATCAGTAAAGTAGGCAGACTCTGGTTTTGGGGGTAGGTGCTCGAGAATTTCCAGGGGGACTCCTGAAGCTCGATCCCGCCTTTGCGTATGCCGAGCCTCCTTGCTCATGACCTTTGCCATGGGTGGAGTTCCTCACACTGGCTCCCGGCAGACTGGGAGGCCTGGTGTGCTGTGATTCATGGGGTTGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAATAGGCAAATTTAGCCTTGGAATATGGAATGAAGCAGGGCAAAGGCTAATAGAGTTTTGCCAAGAGAGTGCACTGGTTGTAGCAAACACCTTCTTCCAACAACACAAGAGAAGACTACACATAGACATCACCAGATGGTCAACACCGAAATCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAGCAAAAACAAGACCGGGAGCTGACTGTGGCTCAGATCATGAACTCATTGCCAAATTCAGACTTAAATTGAAGAGAGTGGGAAAAACCACTAGACCATTCAGGTATGACCTAAATCAAATCCCTTATGATTATACAGTGGAAGTGAGAAATAGATTTCAGGGACTAGATCTGATAGAGTGCTTCATGAACTATGGACGGAGGTTCATGACATTGTACAAGAGACAGGGATCAAGACCATCCCCATGGAAAAGAAATGCAAAAAAGCAAAATAGCTATCTGGGAAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGCAAAAAGCAAAGGAGAAAAGGAAAGATAGAAGCATCTGAGTACAGAGTTCCAAAGAATAGCAAGGAGAGATAAGAAAGCCTTCCTCAGCGATCAATGCAAAGAAATAGAGGAAAACAACAGAATGGGAAAGACTAGAGATTTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCTCGATAAAGGACAAGAATAGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAAAATGCTTCACGAGCCAGATAATCACGATGGTGTGATCACTCACCTAGAGCCAGACATCCTGGAATGTGAAGTCAAGTGGGCCTTAGAAAGCATCACTACGAACAAAGCTAGTGGAGGTGATGGAATTCTAGTTGAGCTATTTCAAATCCTGAAAGATGATGCTGTGAATGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGCTCAAACTACCGCACAATTGCACTCCTCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATACGTGAACCATGAACTTCAGATGTTCAAGCTGGTCTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCTCTGGATCAAGGAAAAAGCAAGAGAGTTCCAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGACTGTGTGGATCACAATCAACTGTGAAAAATTCTGAAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAACCTATATGCAGGTCAAGAAGCGACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGAAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTCTATGCAGAGTACATCATGAGAAACGCTGGGCTGGAAGAAGCACAAGCTGGAATCAAGATTGCTGGGAGAAATATCAATAACCTCAGATATACAGATGACACCACCCTTATGGCAAAAAGTGAAGAGGAACTCAAAAGCCTCTTGATGAAAGTGAAAGTGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCTGTTCATGGGAAATAGATGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTTTTAGGCTCCAAAATCACTGCAGATGGTGAATGCAGCCATGATATTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAAACTAGATAGCATATTCAAAAGCAGAGACATTACTTTGCCAATAAACATCTGTCTAGTCAAGGCTACGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACTGTTAAAAAAGCTGAGCACAGAAGAATTGATGCTTTTGAATTGTGGTGTTGGAGAAGACTCTTGAGACTCCCTTGGACTGCAAGGAGATCCAACCAGTCCTTCCTTAAGGAGATCAGTCCTGGGTGTTCATCGGAAGGACTGATGCTAAAGCTGAAACTCCAATACTTTGGCTACCTCATGCAAAGAGTTGACTCACTGGAAAAGACCCTGATGCTGGGAGGGATTGGGGTCAGGAGGAGAAGGGGATGACAGAGGATGAAATGGCTGGATGGCATCACCGACTCGATGGACGTGAGTTTGAGTGAACTCCAGGAGTTGGTGATGGACAAAGAGGCCTGGCGTGCTCTGATTCATGGGGTCGCAAAGAGTCGGACCCGACTAAGTGACTGAACTGAACTAATGTGACTCCTTAAACTTGGGACATGCCATTCTTTATTCATTGGTGGGTTCTTATCTCATTTTAGCCAAAAAAATGCCCAAGTGCCTGGCATAAATTGATAGTAAATATTTGTTTAATGAATAAAGCTAGAGTTTAAAAATCATTGAATTAAATGCACTTCCACATTTTCTTTCTCTCTCCTTTCACAATCACACCCTATTTCTGCTTTAAGTAAAGAAAAGAAAGAAAGAAAGTGGAGTTGCTCAGTCATGTCCAACTCTTTGCGACCCCATGGACTGTAGCCTATCAGGCTCCTCCGTCCATGGGAATTTCCAGGCAAGAGTGCTGGAGTGGATTGCCATTTCCTTCTCTAGGGGATCTTCCCGACCCAGGAATCAAACCCAGGTCTCCCACATTACAGGCAGATGTTTTACCATTTGAGCCACCAGGGAAGCCCCAGTAAATAGAGTTTACGGAGGGGGAGAGCAAGGGAGAAAGGGGACCCCAGATATCACTGAGAACTCATTGTTTAGATGAGGAAATGGGCCCAGGCAGTGGACAAGACCTGCCCAAGGGGACCCAAGAAGGTGGTGTCTAATGCAAGAAACCTAGGTTTCCCAGCTTCCAGGTTTTCCAGACTGTTACAATGCCTCTCACCTGCATCTGCAGATTTATGTTTTGGCTATGAGGCTAAGGAGGAATAAAGGTCATGGTGTCCTATTTTATCTTCCCCAAGATGAGCTCTGTAGCATCAAAGACCATTACTCACACTGATCACTAGAAGACATGTACAAATGTTTTGTTGTTGTTTTGTTTAAGTGTCTGGGCTTGCTGTTGTGGACAATATTACAACATAACCTTGCAAAGGAAGTAACAGAAGATAAAATGGCTGTTCACTAAGCAACAGCCATTCTGTTTATCACTCCTAGAATGAGGAAGTGCTTGCTTCTGTCAACAGAGGCTTTGACAGGCTCTCTTGCACCTCCTGGGGTACAAGAGAGAAGCAGCATTTGAGAGACACAGGTTCTGCATCTGCAGACCTGGGTTCTGGTCCCACTGCTGATCCAAACTAGTTGTATGATCTTGGACAACTCCAATCCCCTCTCTGGGTCTCAGTTTCCTCTTCCATAAAATGGGAAGAAGAGAAAATAACAGGATGGTGTCAAAGATCTCCAGAATTCCTTCCAACTCCAACCTGAAGCAGTTCTCTCACTGATACGGAGGTACCAAGTGTGCAGTGGGGTGGTCATCAGACTTCGCACACCTCATGACCTCACTGCCTACCTGAACATGCACAGCATCTACCAGTTGTAGAATCTAGTGACCTTCTGGTCAGACAAGGTTCACAGAGGCACCACTTAGGCCTGAGGCTCTCAATTTTCTCACTCTGTTACTCTAAAAATATTCCTTTGATTCCGCCTGTGCATAGGTCTTGTTTTTCTAAGTAGATGTCAAGCTCTTTGAATAGCCTCAAAAGTCCCAAAGCAAGTTCAAGACATGTGCGGGTGTGTTAGTCGCTCAGTCGTGTTCGGCTCTTTGCGACCCCATGGACTGTACCCCACCAGTCTCCTCCATACATGGGATTTTCCAGGCAAGAATACTAAAGAGGGTTGCCATTTCCTGCTCCAGGAGACCTCCCCCACCCCAGAATCGAATCCCAGTCTCCCGCATTGCAGGCAGACTCTTTACCATCTGAGCCACCAGGGAAGGCCCTTCAATACATACTAGACAAATATTAGGCAAAATAGTCACACCTGTGGGATTGCAGAGTCGGACACGACTGAGCAACTGAACACACACATAGAAGAGAAAGTCAGGAGGCAGGAATACCACGTGGAAGAACATTGTCACAGCGCTGGCAGAGACGAGGGGCAGAAGGATGATGGGAGGAAGCATTATAAGGGCAGAGATGGGACGACCTGTTCTTCTTTCAGTGTCCACTTTCCTCCCACCTCTCCCCTGATAACGCTTTCTCCCATCTTCCTTCGGCTCCTTCATTTTTGCCAGGGCTGTGACAATGCTCTTCCTGCCTCATGACTTTCTCTTCCTAGTGTGTGTTCAGTCACTCAGTCATATCTGACTCTTTGCCATCCCAGGGACTCCAGCCATTTCCTCCTTCGGGGGATCTTCCCCACCCAGGGATCAAACCCGCATCTCTTGCATCTCCTGCATTGGCCTGCGGATTCTTTTTATACTACTACATCAGCTGGAAAGCCCTTTCTCTTCTATAATACAACTCAAAAAGTCCCTTATCCCTTTTTACTTAACCTATATACAGAGTACATCATGCAAAATGCCAGGCCAGATGAAGCACAAGCTGAAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTACGGCAGAAAGCAAAGAGGAATTAAAGAGCCTCTTGATGAACGTGAAAGAGGAGAGTGAAAAAACTGGCTTAAAACTCAACATTCAAAAAACTAAGATCATGGCATTGGGTCCCATCACTTCATGGCAAATAGATGGGGAAACAATAGAAACAGCAATACACTTTATTTTCTTGGGCTCCAAAATCACTGCGGACAGTGACTGCAGCCATAAAATTAAGATGCTTGCTCCTTGGAAGAAAAGCTATGAGAAACCTAGACAGCATATTAAAAACCAGAGACATTACTTTTCCAGTAGTCATGTATGGATTTGAGAGTTGGACCATAAAGAAGGCTGAGCACCAAAGAATTGATGTTTTCCAACTGTGGTGTTGGAAAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCACTCCATCCTAAAGGAGATCAGTCCTGGGTGTTCATCGGAAGGACTGACGTTGAAGCTGAAACTACAATACTTTGGCCACCTGATGCGAAGAACTGACTTATTGTAAAAGACCCTGATGCTGGGAAAGATTGAAGGCGGGAGAAGGGGACAACAGAGGAGATGGTTGGATGGCATCACCGACTCACTGGACATGAATCTGAGTAAGCTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGAGTGCTGCAGTCCATGGGGTCACAAAGAGTCGGACACGACTGAGCGACTGAACGGCAACAACAAATAGCTCCCAACAGTAAGGTCAACGTGGACCACTCTCAGTTCTCTGCACACACCGTACCTTTAACACACACACCTCGCCCACGATTTCACCCGGCAGTGAATTCTCTTCTGAAGTGTTCAGTCAGTGGTCACTGAGAGCCATCAACGCCTCCCTGCCTCTTTATCCCCTTGAGCGCCAGAGCGGTGACAGGGACTGCCCGCCCACCGGGAGGAAAGACTCCCGGTAGCCAAGCAGCCCGGGTTTCCCACCCCTTTTCCCTTCCGAGCCATCAGGAGCTATGGTGGGCGTGGCCGCTCGCCCCGCACCTGCGCGTTAAGAGGAGGGCGGCGAGGCACCGAGGCGGCTGTGCCTGCCGCATCCCGTGATGAGGTCGTGGGTGGTCGGCGCCCGGCTGCTGCTTTTGCTGCAGCTGGTGCTGGTGCTCGGAGCGGTGCGGCTCCCTCCCTGCACCGACCCTCGGCACTGCACCGACCCTCCGCGCTATACCCCGGACTGGCCTAGTCTGGACTCCCGGCCGCTGCCGGCCTGGTTCGATGAAGCCAAATTCGGGGTGTTCGTGCACTGGGGCGTGTTTTCGGTGCCCGCCTGGGGCAGCGAGTGGTTCTGGTGGCACTGGCAGGGCGAGAAGCTGCCACAGTACGAGAGCTTCATGAAAGAGAACTACCCGCCGGATTTCAGCTACGCCGACTTCGGGCCAAGGTTCACGGCGCGCTTCTTCAACCCCGACAGCTGGGCTGACCTCTTCAAGGCCGCTGGGGCCAAGTATGTAGTCCTGACGACAAAGCATCACGAAGGCTACACAAACTGGCCAAGCCCTGTGTCTTGGAACTGGAACTCTAAGGATGTGGGGCCCCATCGTGATTTGGTTGGTGAGTTGGGAACAGCCATCCGGAAGAGGAACATACGCTATGGACTGTATCACTCACTTTTAGAATGGTTCCATCCTCTCTACCTACGTGATAAGAAAAATGGCTTTAAAACCCAGTACTTCGTCAATGCAAAAACAATGCCAGAGCTCTATGACCTTGTTAACAGGATGAGGTCGTAGTGAATGACCGATGGGGTCAGAACTGCTCCTGTCATCATGGAGGATACTACAACTGTAAAGATAAATTCCAGCCAGAGACCTTGCCAGATCACAAGTGGGAGATGTGCACCTCCATAGACCAGCGGTCCTGGGGCTACCGTCGAGACATGGAGATGGCTGACATCACAAACGAATCCACGATCATTTCGGAACTGGTTCAGACAGTAAGTTTGGGAGGCAACTATCTTCTCAACGTCGGACCAACCAAAGACGGACTGATCGTTCCCATCTTCCAAGAAAGGCTACTTGCTGTTGGGAAGTGGCTGAGCATCAATGGAGAGGCTATCTATGCCTCCAAACCATGGAGAGTACAATCTGAGAAGAACTCTGTATGGTATACGTCTAAAGGATTAGCTGTTTATGCCATTTTACTGCACTGGCCAGAATATGGAATCTTAAGCCTTATATCCCCTATAGCTACTTCAACCACAAAGGTAACAATGCTGGGAATCCAAAAGGATCTGAAGTGGTCCCTAAATCCCTCAGGTAAAGGTCTCCTCGTGTTCCTGCCCCAGTTACCACCCGCTGCTCTTCCAACTGAGTTTGCTTGGACCATAAAGCTGACAGGAGTGAAGTGATCATTGGAGTTCAAGAAGAAAGGGACACCGCCGGCACTTTGATTTTCCTCTTATATCGCCATCATTATAATAAACGACTCTTCTCTACTCAGAAATCTCTTTTCCAACACATTTTAATAAATGGAACGGATTACATTACACTGATGTCTCACGGGATCAAAGATCTGAGATCCAGTGCTAGCATCTCTCTCTGATCAATAGAAGAGACTGAACAGTTAAGCTCACCCATTCCTACTATTGGGAATTATCTGCAATGGAAACTTCCTCCATCCTCTGTTTCATAACCTGACTGCTTACTCAGATGACTTCAAGAATAAGCCAAATCGTCCCATTGCCTATGGGAGGTGCTGAAAAGGATTTGGCAGACTCGACTATATGCTATTTATTTAGCATCGGCTGTCGCCAGCTACCCCCATCTGCCCCCAAGAGCAGGAGAGCCTCGAGGGGAAGGAAAATGCTTCCAAGGCTGCTAATAGTAAGCTTTTTAGAAGTTTGCAAAGCAAGCTAAGAGCTCTGACATTCAGTCTGTTTACAGGGATTCTATGAAGAAAATGAATGTGATTCTGCCTTGCTTTAATACAGTCAAATAAATAAATTTGTATGTCAAATCATTTTCTACTAAAAA EMBV3_04088 GCGGAAGGGATTCGTGAAAATTGCTTTGACCCATGGTGCTTATTTGGTGCCAGTGTTTTC Gene GeneID:407225|MOGAT1:NM_001001153:55_cdna Constitutive 0 NULL GeneID:407225 2 GENE MOGAT1 NULL monoacylglycerol O-acyltransferase 1 EMBV3_35607 CCTGCTTCCACTTCTTTACAGGTTGGCTGTGGTCCAGTGTGTTGCAGTTTTCTGCAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08206 TGCCTTCTGTCTCTGGGACTCACTGGTTTGCACTGACTCTTTTCACCGAGGCCAAAGCTA Gene GeneID:508720|LOC508720:XM_002697962:680_cdna Constitutive 0 NULL GeneID:508720 25 GENE LOC508720 NULL similar to class II transactivator EMBV3_20962 CTCGGGGTGGTGGGAGGGTGACGGTTAGAGTTACGACAGTAAGGCAACAATAGAAGTATT Gene BVT0102_046506 - 0 NULL GK000002.2:134341009-134345969 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106986 TCONS_00104203 TCONS_00104201 TCONS_00104202 2 XLOC_062954 XLOC_062316 Coding TCONS_00106986 XLOC_062954 NonCoding NonCoding - 2:134341068-134344379 - TSS78633 3249 1 TCONS_00106986_5 150 2 0.0190332326283988 0.00184420251515214 0.00221443565903909 0.00123456310308147 0.00144259893789879 0.00192143173332093 2.49994014765559e-07 0.0011055637800899 0.00182441578678043 0.00167749641006336 1.30543715390103e-07 0.000241898831625256 0.000150835226050178 5.69049512694306e-05 0.000330659394284452 0.000515791243234189 0.00399338341415152 9.97384698233757e-117 0.00171489023741373 0.00201819510932266 0.0019013458543601 0.000181847932203465 0.000800693458596045 0.000954923254170959 0.00181810937386331 0.00263711314686213 0.00303981904187433 0.00179281034309116 0.000357895490053984 0.000362496385477205 2.95161002767951e-25 XM_002685794.2 IFFO2 PREDICTED: Bos taurus intermediate filament family orphan 2 (IFFO2), mRNA. 0.0 3339 100.00 0.569405971068021 NM_001136265.1 IFFO2 Homo sapiens intermediate filament family orphan 2 (IFFO2), mRNA. 0.0 769 77.74 0.296091104955371 0 noncoding 1 1 1 1 -0.0241526562883897 0.847400183074287 -0.0845701521434233 0.209960479973199 GTCCTCTTTGCCCCTCCCCCATCACTTTATCCTTAATTAAAAAAAAAAAAAAAGGCATCAATTCTAAGACATTTCACTTTATTTAAAAGAAGCCAATATACAGGATATAAAGGGCATAATATTTACAACAATACAGTAAACAGGTTGGTTTCCGGTAGGGTCAGTAGTCTTTCAGTGAGTATAAACCCCCCCTTCCCCTTGACGCTAAACCCAGCTGGCAGACAAAGAGCAGCAGTGGGGTGGGATGGGACTTCAGGACAGAAAGTCTGCCCGGATGGGGCTAAAAATAATGTAGATGTGAAAATGTCCACGAAGGAGTCTATGGGCGGAGGGTGCCTTTTCCTCGTTGCTTTGATGGCTTGGCAGGAGGAATGGTGAGGGGTTTGCCCGAGACTAATACACAGCCCACCCTGAGCCTGGAAGTCTTCCACTCATTTCTCAGCTCTCTCCCAAATACAGCTGACTTGGCAATGGATCTTGGCAGACCAGAGTCGGAGCAGCTAATCAGAGCCCACCCTCTGAAGCAGACCTTGTCCCCCACCCAGCACCCCCTTTCCCTCCCACCACCCTACTCCGTTCTGAATTCCCCACTGCCCACCCACTACCACAAATGCCCATCCCCTGGCCTTCCAATGACCAAGGAGCTGGGGGATCAAGGGACAGAGAAATGGGGTGAGGGGTGACCTTTGCGCTGCTGAAGCCACCCATGGGTATGGATGAGCAGGTGGTGAGGATGAGGAGAAAAGGTGAGGGGTACTGATTATATTAAATCCAGCAGCAACATGCATCTCGTCCACAGAAAAATGCTGGGCTACCATAACTGCCTACCCTAGATTTTAAAAAAACCTTTCCTTTCATAAAAATAGATGAGAGTCTCTTGCTTTATAAATAGATTACATTTAGCTTAAGTTATACCTTATATGACCCCCTGCCCCACACCCTCTCCCCCATCCCAAGCCAAAGTGGTTTGATTCGCCAGGTCATCTGAGCTCCATCCATGGAGCTAAGTCCATGATGGACAGGCCAGTCAGAGACCTCTAGACATATTGCCACAAGAAAACAAAATGTGTTGACTTGTCAATCATTTTTTTCCCTGTTCAGAAGCTCAGAAATGTGTGTGTATGTGTGTGTGTGTGTTCCACAATCAGGGAGCCCAAAGGAAGCTACTCTCCCTGCCCCTCCCCAATCCTCTCTTTTTATAAAACCCCCCAAAATAGGAGAGCAAAAGAGGGCAGCACAGGAGAACCCATCTGAGAACAATTCTGAAATACCAATGTCAATATGACACTGGGCTAAGACATAGAAAACCAAAATAAAGTATTTACATCTTTACAAAGGACGGGCCAGTTGGTCCCAACTGGACCTGGTGCTGCCCCAGCGAGCGTTGGGGTCTTTCTTGAACTTGGTGGGGAGGGAGGCAGCCAGGCCAAAGCCCAGGACCACACCCGCGAGGCAGGTCACTAACACTCTTGCTGTCCCGCCATCCACCAGCCCCAAATCCTTGCTCCCCAGGGAGAGCAGCTATTGAAAACCAGCAGGACGGATCTTTCTGGCCAGCATCTGACCCTGGCTCCTGCCACTTCCATACTTCCTAGATAAATTCAGAGTACCCTAGTCCCCAAAGACAAATATCCTATGTATACAAGGGGGGAAGAAAAAATAACACCACTGGACAGCGATCACCACAGTAACCTTAGTTACCCCTAAATACTTCTATTGTTGCCTTACTGTCGTAACTCTAACCGTCACCCTCCCACCACCCCGAGGCAGGCTTCCATTCTGCCCACCTGCCCACAGCACTCCTCAATGCCTCCCTCACCCTGGGCAGAGGAGGCCCGGGGGCGGGGGGCCGGTTTCCCACCCTCCCAGAAACGGAAAATCTTTTCAGCAGCTGAGGTCCAAGCCCACCTGGGTCTGATAACCTTTGGTTAAAATAAAAATAAAACAACAATAACAATAACGACAATAATAATCTGTTTGAACCCTGTAACCTTTAGAACAAGGGTCAGTGAGAAGGAGAGGAAGTGGGTGATCTCTCCTCCGAAACCTCGTCCCTTCACGTACCTAACGAGGGACTATCTGGCTGAGAGATGCTGGGAATGGAAGACGTTCAGCCAGACTTTTACAGGGAACCAGCAGGGGGTTCCCCCACGAAAACAAAACAAAGCAAAAAAAAAAGAGAAAAAACTCACAATAAAGGCCACCAAGTTCTCATAAATAAAAAGTACACACCATCACTAACACTCTCCTCTCTCTCCATATATATATATATTTATTTATATAATATGAATATTATATACAATGGTTTTAAGACTGCAAAACAGGTGGGGAAACGGAAGAGAGAGGAGGCCCTTACAGGTCACTGGTCCTCTGGGGAGGAAAGACGGGAGTCCTTATCTCAGAGCCCCTCCTCTGCCTGCAGACACAGGCCGTGGGGTAGTAAGGAGCTCTGGTCCTTGGGCACATTTTGCTCCTCTGACCTCCAGGGGGAGCTCCTGAGCCAACAAAACCAAAAATCCCCAATCATACAAGGGGATTGGTAGTAGTGAGTAGCGGGTCCAAAAAGATACTTAAAAAAAAAAAAAAAAGCCTGCTCTGCGGGCTCCCAGCTGAGATTTGAGGGTGGCCTCCACACAATGCCCTCTGACTCAGGTCCACTCAAGTCTGGAGAGATACTGGCTCAGATTAACTCTCCAACGGATCAATCAAGCAGTGAGTTACGGTAGAGGTGAGCGTGTGTCCATGAGCGTGGCTCTCAGGTGAGCTCCCGCTCCGGCCACCTCCTCTCTGCCAGCAGTCCCTGCTGCCTCCCTCCGCTTCCCTTTCCAGTGCCCGCCGGTGGCCAAACAGTGGGCAGCTGGGGCACAGTGGAGAACCAAGATGCTGGCAGGCAGTACTGACCCAGCTCCCTGGAGGAGGCGGTGGCTACCAGGCCTGGCCCCCTCCAGACTTTCTCACAGAGAAATTTCAGATCTATAACCCCTTATTGTTGGCTGGGGAAAAAAAAAAAAACATCAGGGCAATAAAAGACATTCCCCACCCCCACCCCCGGCCTATCTCCCCAACCCACAGAAGTCCCAAGAAAGCAAGCAGTCAGGTGGCTGAGGTCCTCGGGACCCCCACCTCGCTATCAACCTTGACCAAACCCCCTCCCAAGTCAGTGCTCACCCGCAGAGGCTGCGAGAGAGAGAGATCACCCTAGCTTCCGCCTCCTTCCCAGCTCCAGGGGAAAACCAAGGAGCTAGTTGG TCONS_00104203 TCONS_00104203 r 5' 0 TCONS_00104203 TCONS_00104203 r 5' 0 EMBV3_41762 AGGGCCAGTGGCTGCGTTCTTACCTTGAAGCCTACAAAGAATATAAGGGTTTTGGGACTG Gene GeneID:540705|ETNK1:XM_002687736:67_cdna Constitutive 0 NULL GeneID:540705 5 GENE ETNK1 NULL ethanolamine kinase 1 EMBV3_09396 TTCCTTGGTCGTCCCTGAGGAGGAGAGACAAGCTGTGTGTGTATGTATTCTCCACCATTG Gene GeneID:100295614|LOC100295614:XM_002687009:34_cdna Constitutive 0 NULL GeneID:100295614 4 GENE LOC100295614 NULL hypothetical protein LOC100295614 EMBV3_06623 CATGTCCTGGGCAGATGAACTCAACCTGGTAGATTAAAGTTTGCTTGGGTCACAGTTGCC Gene GeneID:781217|ATMIN:XM_002694734:103_cdna UTR3_Alt 2 NULL GeneID:781217 18 GENE ATMIN NULL ATM interactor EMBV3_32475 ACGTGTGAGCAAAAGGATTTGTACCTATTTGGGGGTTTAGGGCTGGGGATGCTCCTGCTT Gene GeneID:100296268|LOC100296268:XM_002697373:384_cdna Constitutive 0 NULL GeneID:100296268 23 GENE LOC100296268 NULL similar to leukocyte specific transcript 1 EMBV3_04914 TCTGTGAGCTCATTGCGCGGGACCAGGGAGGTGGAAGATGAAACTGTTTTACATAACATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38967 GCACGTAGACCCCCCGTTCCACAAGAACAGGACAGGTGAGGTTGAAGGAGCCAACCAGCT Variant GeneID:613626|MDP-1:NM_001164221:260_cdna 212^322 3 EMBV3_27592 GeneID:613626 10 GENE MDP-1 MGC133592 magnesium-dependent phosphatase 1 EMBV3_17473 ACCACAGGGTGGGCACTGGAGAGGGAGCTGGCATCTCCACAAAGACCCCTCGCCCCTACA Gene BVT0102_435064 + 0 NULL GK000010.2:21009476-21206753 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016295 1 XLOC_008692 Coding TCONS_00016295 XLOC_008692 Coding Coding CYP11A1 10:21149040-21149352 = TSS11326 312 1 TCONS_00016295_1 90 1 0 0.000479687117268047 0 8.89807906174517e-05 0 0.000917809445512238 0 0 0.000284361877504085 0.000480488189471944 0.000237374993427399 0.000293485145571149 1.14605190782077e-05 0.000165535520856554 0 4.63013927193578e-05 0.0073647590319247 0.000851399395279275 0.00723777252704031 0 0 0 4.75682864505955e-05 0.000147019927562682 0.00666286206385358 0 0 0 9.23574420439086e-05 3.11192573970279e-05 0 NM_176644.2 CYP11A1 Bos taurus cytochrome P450, family 11, subfamily A, polypeptide 1 (CYP11A1), mRNA. 2e-148 527 98.68 0.96474358974359 NM_000781.2 CYP11A1 Homo sapiens cytochrome P450, family 11, subfamily A, polypeptide 1 (CYP11A1), transcript variant 1, mRNA. 7e-73 277 81.88 0.913461538461538 TCONS_00016295_1 sp|P00189|CP11A_BOVIN CP11A_BOVIN Cholesterol side-chain cleavage enzyme, mitochondrial; 4e-60 194 100.00 0.988888888888889 0 noncoding 0 0 0 0 -0.057538843624637 0.634138909161034 0.0605952915253249 0.272757825224019 AGCAGCAGCTGTGGGGGCAGCATGCTAGCAAGGGGGCTTCCCCTCCGCTCAGCCCTGGTCAAAGCCTGCCCACCCATCCTGAGCACAGTGGGGGAGGGCTGGGGCCACCACAGGGTGGGCACTGGAGAGGGAGCTGGCATCTCCACAAAGACCCCTCGCCCCTACAGTGAGATCCCCTCCCCTGGTGACAATGGCTGGCTTAACCTCTACCATTTCTGGAGGGAGAAGGGCTCACAGAGAATCCACTTTCGCCACATCGAGAACTTCCAGAAGTATGGCCCCATTTACAGGTAAGCCTGGCAGAGGATTGGG EMBV3_37698 GTCTCTTGAGGCAATGCCATTGCTATGAATCCTTGCTAGGCAGCAAATGGCAGTGTATCT Gene BVT0102_012802 - 1 EMBV3_06317 GK000009.2:47900287-48474664 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17465 ATACTGTGTACTGTGCTTAGAATTCCTTCCCAAGATGCCCAGCTCAAGGCTCTGGGTACT Gene GeneID:783597|LOC783597:XM_002693350:271_cdna Constitutive 0 NULL GeneID:783597 15 GENE LOC783597 NULL similar to olfactory receptor Olr110 EMBV3_21428 CTGTTCCTTCAAAGAGACTGTGTGCCTGTGTCTGAGGAACTTATCCATTATCCACCTCTG Gene GeneID:538576|OSBPL11:XM_002684797:156_cdna Constitutive 0 NULL GeneID:538576 1 GENE OSBPL11 NULL oxysterol binding protein-like 11 EMBV3_37755 GCTTTAAGGCCAAGTCAGTTCCGGTAGCCCGACTGTTAGGGACATTCTGAGATGGGAAGA Gene BVV0102_163208 + 1 EMBV3_21096 GK000019.2:42903082-42921866 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42958 ACTTGGTGACCCTGCCGAGTATGCTCATCTGGTACAGGCCATCATCGAGAACTCATTCCT Gene GeneID:281809|HSD17B10:NM_174334:5_cdna Constitutive 2 NULL GeneID:281809 X GENE HSD17B10 HADH2 MGC134122 hydroxysteroid (17-beta) dehydrogenase 10 EMBV3_39007 ATGGTCAGGTCTGGATCTCGACCGGGCCAGGACCAATTGGAGAAAGATACCCCGTTTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28130 TTTTGTTGGGACAGGCTGTGTGATGCATAGAGCCTCTTTCATGTGAAATGCGTCTGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04309 GGGATCTAAACTTATCCAAAAAGCTAGAGAGGCACCATTTGTCCCCATTGGAATGGCAGG Gene GeneID:100295586|LOC100295586:XM_002690480:409_cdna Constitutive 0 NULL GeneID:100295586 10 GENE LOC100295586 NULL similar to HIG1 domain family, member 1A EMBV3_09424 TTGGATGATAGTGGCGACCATGGGGGTATCGGGTTGTAGCCTAGCGAAGGACTACTTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39481 CAGCGAGTACTGAATACAGCAGTCCTTTCAGAATCTGTTCCTCTTAAAGCTGTCAGTGAG Gene GeneID:538989|NAA16:NM_001103100:166_cdna UTR3_Alt 2 NULL GeneID:538989 12 GENE NAA16 MGC152570 NARG1L N(alpha)-acetyltransferase 16, NatA auxiliary subunit EMBV3_37890 AGCTCGTCAACTGGGCAGTAAGAAAGAAAAGACTTCTGGGAAAGATCCTGATGACTATCC Variant GeneID:534611|NME7:NM_001015656:105_cdna 308^786 2 EMBV3_15440 GeneID:534611 16 GENE NME7 MGC133731 non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) EMBV3_14727 GTGCACAGGCCTTGGAGTTGAAGGTAACTGCTCACGTTCTCTAAGGAGCACTACAGTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30454 GGGGATTTCTGTGTATTAATTTTATATGGCAGGTGGATTCTTAACCACTGGACCACCAGG Gene BVV0102_404842 + 0 NULL GK000030.2:10662453-10836161 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18582 AATCTGTGTGCCATCCACGCTAAGAGAGTCACCATCATGCCCAAAGACATCCAGTTGGCT Gene GeneID:785387|LOC785387:XR_083706:232_cdna Constitutive 0 NULL GeneID:785387 7 PSEUDO LOC785387 NULL similar to Histone H3.3B CG8989-PA EMBV3_01704 CCAATGGTTGCCAGGGAGAAAAAGAGAGGACCTGTGAAAAATCTGATGAGTCTGCTGTGA Gene GeneID:535735|LOC535735:XM_002685499:8_cdna Constitutive 0 NULL GeneID:535735 2 GENE LOC535735 NULL similar to CG31122 CG31122-PA EMBV3_42832 TGAAAACGAGTTGAACCGTGTGTGTGGCCATTGCGAAGATTCGCCTTTCAAGGAGGAAGC Gene GeneID:508041|LOC508041:NM_001100318:106_cdna Constitutive 0 NULL GeneID:508041 22 GENE LOC508041 NULL hypothetical LOC508041 EMBV3_22406 CACAGGGATCAAACCCTCGTCTCTTAGGTCTCAATGGCAGGTGAACTCTTTACCACTAAG Gene BVV0102_087343 + 0 NULL GK000012.2:33419170-33448356 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11380 ACAGGTTTTGCAGGGGGGGTTGCCTGTTGTGTGCACTGGTGTATTCCAAGCACCTAGAAT Gene GeneID:540545|SYT13:NM_001098115:96_cdna Constitutive 2 NULL GeneID:540545 15 GENE SYT13 NULL synaptotagmin XIII EMBV3_43369 GTGCTGGAATCAAACTGAGGCAAGCGTATGAAAACTGTGGGCTTTGCCTATTTCAGGGGC Gene GeneID:538657|TRIM68:XM_002693386:18_cdna Constitutive 1 NULL GeneID:538657 15 GENE TRIM68 NULL tripartite motif-containing 68 EMBV3_21889 CGAACACCGAGTCCAGGTTCTCCAGCACGGCTACCACCAGTGGCATCAGCTCCTTGACCA Gene BVV0102_293075 + 0 NULL GK000019.2:36270606-36343606 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093515 TCONS_00093513 TCONS_00093519 TCONS_00093518 TCONS_00093514 TCONS_00093521 TCONS_00093517 TCONS_00093516 TCONS_00093522 TCONS_00093520 TCONS_00093512 1 XLOC_057167 Coding TCONS_00093519 XLOC_057167 Coding Coding - 19:36273788-36313860 - TSS70124 595 1 TCONS_00093519_1 146 3 0.98522622345337 0.021226480261208 0.019767467387987 0.0121344495011652 0.00634447895810301 0.0147550743090276 0.00531931557192143 0.00808241919886971 0.0101677407270285 0.00737066253676854 6.03060259924304e-40 0.00197829986948072 0.00118564857283991 0.00181357371181608 0.00721384295751436 0.000934252698364917 0.0336005052827529 0.0196480139837462 0.0170040639134115 0.00889579775180236 0.012258919174785 0.00811051814139705 0.0118508545524823 0.0304360817525628 0.024591627282259 0.02360252614245 0.0236288894540571 0.00246146750129503 0.00392834678233502 0.00245814146105066 0.0079455646620987 XM_005220610.1 SPAG9 PREDICTED: Bos taurus sperm associated antigen 9 (SPAG9), 0.0 958 100.00 0.890756302521008 NM_027569.2 Spag9 Mus musculus sperm associated antigen 9 (Spag9), transcript variant 0.0 800 93.61 0.890756302521008 TCONS_00093519_1 sp|Q58A65|JIP4_MOUSE JIP4_MOUSE C-Jun-amino-terminal kinase-interacting protein 4; 7e-89 284 100.00 0.958904109589041 1 coding 0 0 0 0 0.221395937375296 0.310759947018198 0.0616427305580437 0.246048033720761 ACCCCGCCGGGCCCAGCCCCAGCTCCAGCCGCAGCGGCCCCGTCCCGTGCGGGCCCGTGTCGCCCCCTCAGCCGGAGACGCCCCCGGCCGGCGGGCAGCCCGCCACCATGGAGCTGGAGGACGGTGTGGTGTATCAGGAGGAGCCCGGCGGCTCCGGGGCCGTGATGTCGGAGCGGGTGTCCGGCCTGGCCGGCTCCATCTACCGCGAGTTCGAGCGGCTCATCGGGCGCTACGACGAGGAGGTGGTCAAGGAGCTGATGCCACTGGTGGTAGCCGTGCTGGAGAACCTGGACTCGGTGTTCGCGCAGGACCAAGAGCACCAGGTGGAGCTGGAGCTGCTCCGGGACGACAACGAGCAGCTCATCACCCAGTACGAGCGAGAGAAGGCGCTGCGCAAGCACGCAGAGGAGAAATTCATTGAATTTGAAGACTCTCAAGAACAAGAAAAAAAAGATTTACAGACCAGAGTGGAATCTTTAGAATCTCAAACAAGACAACTTGAACTCAAGGCCAAAAACTATGCTGACCAGAGCCTATCAGCAGTCTGATGGGGCAGAAGACAACAGATGGAAAAGGTGTTCCAAACTTGGCAAAG TCONS_00093521 TCONS_00093521 s 5' 0 TCONS_00093521 TCONS_00093521 s 5' 0 EMBV3_27610 TGAAACAAAACTAAAGGCCATGAAGTCAGCAGCATGCAGAGGCACCACTTGAAGCGGGTG Gene BVV0101_053340 + 0 NULL GK000014.2:14392937-14953689 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39583 AGACAAAAGCCAAGATATCAAACAGCCTACTCCAGCTCCAGCAGTTCCAGTTCCAGGTCC Gene GeneID:407147|ART3:NM_001040496:35_cdna Constitutive 0 NULL GeneID:407147 6 GENE ART3 MGC127820 ADP-ribosyltransferase 3 EMBV3_18557 AGACCAGCCACTGACTTGGCAGACCCACCTCCTCCCCCACTTCAAAAGATCAATACAAGA Gene GeneID:504822|XPNPEP2:XM_002699515:29_cdna Constitutive 0 NULL GeneID:504822 X GENE XPNPEP2 NULL X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound EMBV3_32502 TACGTCACCAAAAGGGCTCTCAAGAAGAGTCGTTCACGCCTGAGCCAGAAAGTCGTCGGT Gene BVT0102_175357 + 0 NULL GK000025.2:34096083-34125793 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146934 TCONS_00146933 1 XLOC_089252 NonCoding TCONS_00146933 XLOC_089252 NonCoding NonCoding - 25:34117702-34125590 - TSS109748 901 2 TCONS_00146933_2 58 0.331853496115427 4 0.886268543172309 0.00114765077993661 0.00114871176883993 0.00082166431970168 0.000764976876614178 0.000589436364372758 0.00011513206266321 0.000284788913967737 0.000715543513107378 0.000273413203349663 0.000446222010679069 6.11780153668398e-05 1.98414590665007e-05 7.64291122752519e-05 0.000804012461660787 0.000555418803095235 0.000820783508501699 0 2.78375609540766e-05 0.000595958217214478 0.000812954934538165 0.000418229379633897 0.00046121684355575 0.000977478942361835 0.000130246557920255 0.00238683908930352 0.000828878605947435 0.00162481655842615 2.13172943810629e-05 0.000156252526766262 0.00013345749376179 XR_240068.1 LOC101907369 PREDICTED: Bos taurus uncharacterized LOC101907369 (LOC101907369), 0.0 1061 100.00 0.65149833518313 0 noncoding 0 0 0 0 0.00395022787397598 0.973211293432375 0.00995127429964643 0.851287309432605 GTGTGAGGACGCCGGGTCAGAGCTCCCGCAGGTCTAGAGTTTGGTCAGGAGGGGGTCTCTTATCTCCTCTCCCGTCCTTCCTTATGTTATGACCACCTGGAGTCCTGGTGGAACCGCCCCTACGTCACCAAAAGGGCTCTCAAGAAGAGTCGTTCACGCCTGAGCCAGAAAGTCGTCGGTGCCAGGGATCCCTGCTCCCCGGTTCGCCCTCCCTTGAAGAGACAGGCTTGGAGACGGGAAGCAGTCGCTCAAGGTCCCCAGCGGAGAAAAGACAGAGCCAGATCTGACTTGAGAAGTCCAGGTTCCTTCACCTATGGCAGCGTCTCTGAAAGCAAGACTCATCTCACTCTCCACGGACCATATTCTTCTCCAGTGCAAATGTGGAAATGGGACTATTTGGCAAAATCTACTACATCAAAAATGTTGGTACTCTTTGACCCAACAAGTTCAACTGTAGGAATCTGTCCTATGAAATATCTCCATAAGTGTGCAAAGATGTACAAAGACGTTCCGGGCAGCACTGCTTATAATACTGAGAAACCAGAGAATGGATGAATAAATTCTGATAAATCTCTACCATGAAATACTATGTAGCTGTTAACAACCTCATGTGTAAAACAGGGATAATAATAGGATCCGTCTCTCATAGTTTTCATGAGGATTTAGTGAATTAATACCTGTAAAATGCTTCCATAGTAATGCTAGCTGTAGAAATAAGGAAAGATGCAATGTTGATTAAAAAAGAAATGAGAAATGTGATCCCATTTGAGTAAATTAACAACAGTAAACACACATTAAAAAAGAAGAAAAGTCTGGACATACAAGTATCATATGATGACACTGGTGGTCTTTAGTGGAGGGTAGGGTAATGGAGACATTTATTTTGTAAATCTCAATAAAT TCONS_00145219 TCONS_00145220 TCONS_00145221 r 5' 7568 TCONS_00145219 TCONS_00145220 TCONS_00145221 r 5' 191 EMBV3_13217 TTCAAAACCCGCATCTGCTGGTTCTTCGCTCATCACCCGGATGGCTGCGTCCTGCCTGCA Gene GeneID:513470|LOC513470:XM_002688423:49_cdna Constitutive 0 NULL GeneID:513470 6 GENE LOC513470 NULL similar to Putative methyltransferase UPF0383 EMBV3_38072 ATCTATGGTGCCAGCATCCTGCGCCACATCAGGGTCATCTGGGAGACGTTCAAGTTTGAA Gene GeneID:522614|ADCK5:NM_001101110:104_cdna Constitutive 1 NULL GeneID:522614 14 GENE ADCK5 NULL aarF domain containing kinase 5 EMBV3_02602 AGCTGTGAGGTACCCTCTCTCTTCCCTCTGTCCTGCTCTGATGTCTCCATCAACCTCATA Gene GeneID:504567|LOC504567:XM_002687312:107_cdna Constitutive 0 NULL GeneID:504567 5 GENE LOC504567 NULL similar to olfactory receptor MOR160-5 EMBV3_36006 GATGGAGGCCCATGCCAGTAGGGACAGAGTCATAAAAAACTGTATAGCTCAGACCTCATC Gene GeneID:508149|CCDC58:NM_001083389:41_cdna Constitutive 0 NULL GeneID:508149 1 GENE CCDC58 MGC140682 coiled-coil domain containing 58 EMBV3_03275 TGCCATAAACATACACCTACAGGATGCTTGTGACAAAAAGGCCCATTGGTTCCATCTACC Gene BVV0102_082483 + 1 EMBV3_40494 GK000005.2:58115582-58130096 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21024 CTGAAGCCTAAGCGGACACGGCGGGCGCAATCCTGTGACAAGCTGGAACCTGACAGAAGA Gene GeneID:517186|LRRC16B:XM_002690500:466_cdna Constitutive 0 NULL GeneID:517186 10 GENE LRRC16B NULL leucine rich repeat containing 16B EMBV3_28610 GGAGAAACAGCTGGCGCAACTGGAAACCGATCTGAAGATTGAGAAGGAATGGAGACAGAC Gene GeneID:539779|RUFY2:XM_002698900:69_cdna Constitutive 1 NULL GeneID:539779 28 GENE RUFY2 NULL RUN and FYVE domain containing 2 EMBV3_29872 GCCTCCGGGCTGTTGTTAATGTTTTTGTTTTTGTTTTTTTTTTCCCCTCCAAGATGTTAA Gene GeneID:281883|KCNJ2:NM_174373:2_cdna Constitutive 1 NULL GeneID:281883 19 GENE KCNJ2 NULL potassium inwardly-rectifying channel, subfamily J, member 2 EMBV3_35320 TTCCTGACCATGACTCCACTGTCTGAGATAATTCCCAGTTCAAGGACACATAGAGTAGCC Gene GeneID:525093|MRE11A:XM_002692917:29_cdna Constitutive 0 NULL GeneID:525093 15 GENE MRE11A NULL MRE11 meiotic recombination 11 homolog A (S. cerevisiae) EMBV3_05926 CTGCTGGTGGCTTGCTTACAGGACATCAAAAGCAACAACAAAGTCAGCCAAAAGGCCTGG Gene GeneID:522059|RAVER2:XM_002686338:142_cdna Constitutive 0 NULL GeneID:522059 3 GENE RAVER2 NULL ribonucleoprotein, PTB-binding 2 EMBV3_13181 CGTTCAAACCCCCGGAGGAAAAAGAGGAGAGCCTGGCTTTAGCCGTGAAGAAAGCTAAAA Gene GeneID:768055|GSTA3:NM_001077112:383_cdna Constitutive 0 NULL GeneID:768055 23 GENE GSTA3 MGC140790 glutathione S-transferase, alpha 3 EMBV3_35991 GGCATCCTCATTCACCTGGCCAAGTTTTACGGTTATAACAACGTGAAGGAGTACCTGGAG Gene GeneID:514631|CDCA7L:NM_001104977:17_cdna UTR3_Alt 2 NULL GeneID:514631 4 GENE CDCA7L NULL cell division cycle associated 7-like EMBV3_16590 CAAGGTTTCTGAGGCAGTTCTCCCGTGAAGCTCTTGTTACGCTGGGTTCTGTGTTAGCAC Gene BVT0102_208819 + 0 NULL GK000018.2:14077091-14079805 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11649 CAGGCTTGAGCCAAGGATTTAGGCTGGAAGATCAGGAGTGCAAAACATGAGGCTGGTCCT Gene GeneID:538465|TRIB3:NM_001076103:1225_cdna Constitutive 0 NULL GeneID:538465 13 GENE TRIB3 MGC142660 tribbles homolog 3 (Drosophila) EMBV3_28339 CCAGAGACTGTAAAATCTGAGGAGAAGGAGACCGCAAAGAATGTGCAACAGACAGTGGGC Gene GeneID:505293|MED6:NM_001034237:52_cdna Constitutive 0 NULL GeneID:505293 10 GENE MED6 MGC127713 mediator complex subunit 6 EMBV3_34319 TGAGGGTCTAGGTCCGGGCAGCCGAAGAGTGTGGTTAGCAAGATGAACAAAGATGCGCAG Variant GeneID:614069|ENY2:NM_001034747:50_cdna 77^148 2 EMBV3_21717 GeneID:614069 14 GENE ENY2 MGC128580 enhancer of yellow 2 homolog (Drosophila) EMBV3_28934 CTTTGAGCTATATGCCCAGTATCTATGGAAACGATATACCGATGGAAAACCAGACCCCGG Gene BVV0102_127211 + 1 EMBV3_40071 GK000005.2:100642187-100653956 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23068 AAATGAGTCATCTGTCACTTGGCAGCACCGGAACATACATGCCTGCCACGTCAGCTATGC Gene GeneID:526135|RBMS1:NM_001035361:100_cdna Constitutive 0 NULL GeneID:526135 2 GENE RBMS1 MGC128594 MGC151714 RNA binding motif, single stranded interacting protein 1 EMBV3_14115 TCAAAGGTCCCACACAAAGACACACACCCTGTTCCCTGACTTCATCTTGTAGGATCTGGC Gene GeneID:514465|SMAP2:NM_001075670:167_cdna UTR3_Alt 2 NULL GeneID:514465 3 GENE SMAP2 MGC143386 SMAP1L small ArfGAP2 EMBV3_42804 TGGTTCATGGTGCTCTACAGGTCTACTATTTCCTTCTGCTTTTCTGTCTATTCATTCCAC Gene BVT0102_042562 + 0 NULL GK000005.2:76503465-76692597 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03628 CCGTGGTGGAGGCCAAGCTGATAAAGCACAAGAAGGATATCATCAATGAACAGTTTCTGC Gene GeneID:282130|ACADVL:NM_174494:21_cdna Constitutive 1 NULL GeneID:282130 19 GENE ACADVL NULL acyl-coenzyme A dehydrogenase, very long chain EMBV3_20147 ATGACCTCTCCAGTATCTTCTCTGGTCATTCCAGGCAGTGGTTGGGAACAGAACTGGCTA Gene GeneID:538457|PTRF:NM_001081731:175_cdna Constitutive 0 NULL GeneID:538457 19 GENE PTRF NULL polymerase I and transcript release factor EMBV3_38542 CCTTTTGTGCTTCTCGGGCCATCGACCACTTTTACTGTGATTACCATCCACTTCAGAGGA Gene GeneID:788512|LOC788512:XM_002687505:405_cdna Constitutive 0 NULL GeneID:788512 5 GENE LOC788512 NULL similar to olfactory receptor, family 9, subfamily K, member 2 EMBV3_14421 CTGGCCAGAATTGGTCTTTTGTTAAATGGTCAGGTACAGATTCTCATTTGTTGGCTGGAC Gene GeneID:507620|PALB2:XM_002697997:88_cdna Constitutive 0 NULL GeneID:507620 25 GENE PALB2 NULL partner and localizer of BRCA2 EMBV3_42652 GTCCGACGTGGACCAGCGCTGCCTGGACAGGTGGACATGCCAGCCAACAACAAGTGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38027 GCAGAAACTGCTTGCAATCATTGTGGGCAGTGGATGGAAGAATTTAAAAATGATATGCTA Variant GeneID:506223|OMA1:NM_001035033:22_cdna 574^802 1 EMBV3_17557 GeneID:506223 3 GENE OMA1 MGC127053 OMA1 homolog, zinc metallopeptidase (S. cerevisiae) EMBV3_07872 GAGTCATCCTCATCAACTCCCCTATCGAAGGAGACCGGCCGGTACCCTGCCTACAAGGAG Variant GeneID:511930|PDZD7:NM_001075544:117_cdna 423^738 1 EMBV3_10157 GeneID:511930 26 GENE PDZD7 MGC139520 PDZ domain containing 7 EMBV3_37718 GGTGCCTTCAGACCAGAAGTGAAATTGACACACTCAGAAATGGACTTCCTGCAGTCAGGC Gene BVV0102_091704 + 0 NULL GK000002.2:113891181-114335912 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27061 AAGACAAAGAGGTCGGGCAAGGGGGACGATAAACATCAGAGTCAAGGCATGAAGACTCAG Gene GeneID:784532|LOC784532:XM_002695712:323_cdna Constitutive 0 NULL GeneID:784532 19 GENE LOC784532 NULL hypothetical LOC784532 EMBV3_07281 AAGTCGGCCTTGGCCAGTAAGAAACGGACAGACAGGTTCAGTGTAAAATCCAGAGAACGG Gene GeneID:789222|LOC789222:XR_083885:711_cdna Constitutive 0 NULL GeneID:789222 16 PSEUDO LOC789222 NULL similar to zinc finger protein RIZ EMBV3_37936 TTTTTTGGCCATGCTACATGGCTTGCAGGATCTTAGTTCCTGAGCCAGGGACTGAGCCCA Gene BVT0102_221026 + 0 NULL GK000013.2:11960587-12199760 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06023 AGGTGCTCTGATCCTGACTGCCAGTGACCCTTGTGAGCTGAAGTGCCTTCTAAGTCTAAT Gene BVV0102_308582 + 0 NULL GK000011.2:10106504-10113120 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026870 TCONS_00026871 1 XLOC_015132 NonCoding TCONS_00026871 XLOC_015132 NonCoding NonCoding - 11:10106999-10109229 - TSS19187 1477 2 TCONS_00026871_3 71 0.0961408259986459 2 0.338268281740691 0 0 0 0 0 0 0 0 0 1.94935636340791e-05 0.000614009361575845 2.90451583383929e-05 0 0 0 0.000224194734329906 0 1.33600599128781e-09 0 0 0 0.000340112836180013 0.000263782266943774 0 0 0 0 0.000323517254641633 1.91470368572594e-09 0.000309355587613878 NM_001205522.1 ARHGAP26 Bos taurus Rho GTPase activating protein 26 (ARHGAP26), mRNA. 7e-43 179 84.47 0.104265402843602 XM_005264281.1 TLX2 PREDICTED: Homo sapiens T-cell leukemia homeobox 2 (TLX2), 7e-56 223 86.29 0.131347325660122 0 noncoding 0 0 0 0 -0.0311884113989048 0.766817412458687 -0.00139186627381999 0.976163098218353 AGGCAGGATGTAGAATAAGGAGGTATAAAGGTCTGCACGATGCTACGTTTTTCACTTGCATTGATTTATTCAAGAAGGATTTTATTCAGCTTGATTGGAGACACACTAGTGCCCACTCTCTCCTCCTAGGGACCCACCTCTGGAGTGGCAAAAGAAAGTGAAAGATGCTCAGTCATGTCCAACTCTTTGCATGGAATTCTCCAAGCCAAAATACTGGAGTGGGTAACCTTTCTCTTCCCCAGGGGATCTTTCCAAGCCAGGGATCTAACCTAGGTCTCCTGCATTGCAAACAGACTCTTTACCAGCTGAGCCACAAGAGAAGCCCCCAAGGGAGTGGGAAAAGGGACTGACAAATTCCTAACCTGCCAGCCAGTCCTCTTCAGAGTTATTTAATTTACTGTCTCCCCAGGCTCTTTGTTCTCATCCAGGGGAATCCAGCCCATGCCATCTCTGAAGGGTTTGCCTGAACAGCAGAGGTTTCATGCTGTCTAGTAGTCCAAGCCCTTACCTGCTGAGAAAAGATGCTTGGAGTTCTGTGAAGGCTTAGGGAAGGTGATATTATTTGTCTTCTGCACCAAGACAAAAACAGTTACCAAAGGGCAGTACCTCCCCACCCTCAACCTTTTCAGAAGATTGTTGGCAGGGTGGGGGAGAGCTGGATAAATGCGTGATGAAGGTAGACAAGTCTGGGGAGGGTGTTGCGTGTTATTAATGCCCACTGCCTCCCTGCCCCATTGTTCCCTGCCTCAGCCTTCACCTTGAGGCTTCTGCGAACACTGAGGTTTTGTGTGGGGAGAAAGCCCTTCTTCCTCTTCCTTATCTTCCTGCCCAGATGCCCAAATATCACTCCTGGTTCCCTTGAGAGAAAAGACCTCTTACTCTGCCCTAGGCTCCAGGCTGCCAGCCCATCTGCTAGGGAGAAAGGAGGGGCAGAGTTTTCCCCAGAAGATCCTGGAGAATCAACTGGAAGATCCGTGCTCCCAGGGAGACCCAGCTATTAGACTTAGAAGGCACTTCAGCTCACAAGGGTCACTGGCAGTCAGGATCAGAGCACCTGAGTGGGCTGCGGTGGAGGGGCTAAGGACTGCCACAGCAGGGCAGGGTCCTTTGGCCACCATGTGTCTGAGACAAGCCAAGCTGCTCATCGGGTGCCCACCCTCCGAGGGATGCCTCCAACTCGCCGGCGCCGTTCCCCAGCCGCTTCCCATCGCAGCCAGAAAGCCACAACGAAATTTGGTCTTCGAGAGCATTTAGGCGGGGGCCACAACGAATCCGGGAGTCGTCAGGCTGGACCCATCGGGAGGCGAAGAGTGGGGGCTGTGGGAGGCGGCACCTGCAAGGAAGTTGGTGAGGAGAGGAAACCCAGAGGCGGAGGCCAGTGAGGATGGAGTCGCCTTGCGCATCTCGGCTGACTCAGCGCGCAGCGGCCGGAGCTCTGGCCCCTCCCGTGCAAGTTCATAACACACTCGCCACCTTC TCONS_00026868 TCONS_00026869 s 5' 497 TCONS_00026868 TCONS_00026869 s 5' 804 EMBV3_05771 GTAGCTGACCCTGTGCCCTTATAAACTAAGGGTGCAGAATGCAGTTCTGTTTTGAAGAGC Gene GeneID:518370|TBC1D23:XM_002684708:35_cdna Constitutive 0 NULL GeneID:518370 1 GENE TBC1D23 NULL TBC1 domain family, member 23 EMBV3_25856 TACTTCTTGCTGAACTGGGATGGTGAGGGGTATTGGGCCTCCCCCTCTTGCTAGTCTCAA Gene BVV0102_433542 - 1 EMBV3_26113 GK000004.2:2820521-3842580 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073419 TCONS_00090416 TCONS_00102424 TCONS_00187774 TCONS_00086675 TCONS_00088663 TCONS_00110364 TCONS_00013240 TCONS_00132043 TCONS_00089461 TCONS_00243948 TCONS_00098275 TCONS_00187485 TCONS_00253149 TCONS_00135550 TCONS_00140493 TCONS_00169479 TCONS_00105301 TCONS_00174545 TCONS_00056768 TCONS_00154252 TCONS_00230483 TCONS_00252175 TCONS_00172905 TCONS_00174541 TCONS_00056222 TCONS_00223066 TCONS_00201266 TCONS_00088024 TCONS_00013239 TCONS_00169645 TCONS_00174540 TCONS_00221594 TCONS_00102423 TCONS_00051487 TCONS_00238548 TCONS_00140494 TCONS_00057237 TCONS_00169477 TCONS_00078983 TCONS_00171161 TCONS_00013237 TCONS_00071867 TCONS_00207062 TCONS_00056482 TCONS_00169644 TCONS_00063500 TCONS_00119058 TCONS_00051488 TCONS_00099833 TCONS_00221131 TCONS_00226267 TCONS_00243949 TCONS_00053047 TCONS_00169478 TCONS_00053048 TCONS_00161897 TCONS_00211235 TCONS_00226268 TCONS_00107400 TCONS_00086676 TCONS_00185693 TCONS_00171162 TCONS_00132044 TCONS_00013238 TCONS_00071031 TCONS_00162452 TCONS_00031828 TCONS_00154251 TCONS_00010612 52 XLOC_045184 XLOC_055197 XLOC_061863 XLOC_113818 XLOC_052218 XLOC_053449 XLOC_066268 XLOC_008038 XLOC_080693 XLOC_054245 XLOC_150314 XLOC_058521 XLOC_113530 XLOC_156090 XLOC_081773 XLOC_085141 XLOC_103372 XLOC_062534 XLOC_104638 XLOC_034571 XLOC_094012 XLOC_139973 XLOC_155116 XLOC_104243 XLOC_034025 XLOC_136372 XLOC_122914 XLOC_052811 XLOC_103408 XLOC_134908 XLOC_031197 XLOC_145215 XLOC_035036 XLOC_047868 XLOC_103753 XLOC_043637 XLOC_125581 XLOC_034285 XLOC_038227 XLOC_072804 XLOC_060076 XLOC_134447 XLOC_137960 XLOC_031635 XLOC_098782 XLOC_129745 XLOC_063310 XLOC_111746 XLOC_042804 XLOC_099333 XLOC_018073 XLOC_006163 Coding TCONS_00119058 XLOC_072804 NonCoding NonCoding LOC100848861 21:29773433-29776318 = TSS89250 1054 3 TCONS_00119058_3 54 0.926944971537002 2 0.635228848821082 0.000503437518091544 0.000271708745837114 0.000276565618812286 4.33328803190004e-05 4.68423594046937e-05 0.000103510277923514 0.000122646825030631 8.32400278053164e-05 8.23447789634672e-05 0.00312504040097038 0.00162176020407817 0.00161052902615223 0.000236384771219254 0.00141849031290288 0.000294730978969639 0.0147719322494482 0.00319104090303542 0.00470752190350511 0.000654841515267252 0.000278605901718801 0.000123848402799171 0.00470538169822193 0.00430123960902965 0.00368350929784747 0.000122705383592742 0.000140374704507878 0.0020823003153368 0.00328054981297988 0.00374611996567832 0.00538002575172158 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 1474 99.76 0.778937381404175 NM_152473.2 ERVV-1 Homo sapiens endogenous retrovirus group V, member 1 (ERVV-1), 6e-10 69.8 73.64 0.114800759013283 0 noncoding 1 0 1 1 -0.413014337539021 0.0132539193620166 0.541912349801995 0.00143639346602512 AGAAGCCTCAGATATCAAGTAGTGCTGATGGAAAGTCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCTACCCTCCTGCCTACCCCCAAGGGCTCTGTCCCCTTTCACTCTTGCCTAGAAACCTGCACCACTGGACAAAACCCTGAGAGGGATTGTCTGAAGATCCTCTGACCAACCCTGAGGAAATCCGATACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCAGGATATGCAGGTCAACAAGCTACAACGTGCAGCGCCAGTTCAACAAAGATACAAAGCACTACAGCCGACCACGGAAAATATCACTCACCCTTAGATGGACACCACTATAAGGACTCTGAGGCCTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCGCCGTCCCAGTTCAGCAGGAAGTAGCCAGAAAGACCTCGACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGTAATGTTAGGTAGTTAGAATAGGAAACATGTCCAGAATGGCGGTGGCTAAAAGACAAGGAAGGGAAAAGCCCTCGAAAACGGAACAAAGGAAGGTCCAAGGACTTGAGTGAGGACCTCGGGTAGAACAAACAGGACTCCTGGCCAGCCCAATTTACACAGGGCAGGCCCAGGGGGAGGAAAAAACATTAAAAAAGAGGAGCCAAAGGGCCAGGAGTCTCTCTCCCCCCCACGCGTTCATTCTCTCTCTCTCCTCTGCGATTTTGGGTCGACATGGCCTCATGCCTTGAGGATGTATTTTCCTGTTATTTTCTAAATAAAACTGATCTGTAACACAGAGCTGTAACACTGATCTGTCCAAGAGCTATAACACGGTCTGTTTGAGACCTGAGAGCTGTAACATGGTCTGTCTGAGAGCTGTGACATGCCGAGGGCTTTAATGTCTGTCACTTCAAATTTTTGTTGAGACAGAACCGAGACTTCACTCCCCTGACAATTCCACATATAAGAGTTGCCTAATCAGAGCTCAGAGGAAGGAGCTGTTATGTCCTCTTACAAGAATGAGCATT EMBV3_17603 GCTAAAAAGGTGTTCAACCAAAACATCAGTGTAGCCCTCTAAAGAGCCCCTCTCCCTGGC Gene GeneID:780820|LOC780820:NM_001079648:477_cdna Constitutive 0 NULL GeneID:780820 18 GENE LOC780820 MGC137266 hypotheical protein LOC780820 EMBV3_29404 CTGGTCCAAGATCTGTAAACCTGTTCTCAAGGAAGGTCAAGTGTGCACCAAGCACAGGAG Gene GeneID:504445|DKK1:XM_002698362:136_cdna Constitutive 0 NULL GeneID:504445 26 GENE DKK1 NULL dickkopf homolog 1 (Xenopus laevis) EMBV3_29021 AGAACACTTGTGTGGAGCCGGCCTCAGTCTCCTCTCTGATGCACGTCTGTGTGACTTTTA Gene GeneID:536901|CDYL2:NM_001163785:59_cdna Constitutive 0 NULL GeneID:536901 18 GENE CDYL2 NULL chromodomain protein, Y-like 2 EMBV3_07004 TGATCTCCGCCTGCAGTATCTCCACCAGATGCAGGCCAACCACGAGACGCTGCTGCGGGA Gene GeneID:783611|LOC783611:XM_002696116:211_cdna Constitutive 0 NULL GeneID:783611 19 GENE LOC783611 NULL similar to Fanconi anemia-associated protein of 100 kDa EMBV3_02269 GATAGACTGAGGAGCAAGGGACGAGTGAATGTGGCTGCTGATCTGAATGAATCACTTGCC Gene BVV0102_045633 + 0 NULL GK000021.2:10802626-12998067 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120494 TCONS_00120497 TCONS_00120499 TCONS_00120489 TCONS_00120491 TCONS_00120496 TCONS_00120492 TCONS_00120493 TCONS_00120498 TCONS_00120495 TCONS_00120490 1 XLOC_073189 Coding TCONS_00120499 XLOC_073189 Coding Coding MCTP2 21:12838632-13098203 = TSS89980 4241 1 TCONS_00120499_4 878 23 0.983750048156567 0.00417381328588007 0.000339498251254114 0.00185462614792533 0.00161616731276415 0.00207703823314519 0.000609285079275022 0.000729485896265531 0.00124846805482745 0.00196826152959374 0.000279405610804362 0.000259650808156717 2.89299802390715e-05 0.000320242988001688 0.000499852998465604 3.1538932921261e-05 0.000308061884634839 0 1.85844537976222e-05 0.00168023421023999 0.00114877368934517 0.000592632665921453 1.64709414238075e-05 0.000103765057824334 0.000122884771112277 0.00349530993118876 0.00120507020363674 0.000694999170784269 7.33497481434346e-05 4.32375128749311e-05 2.47952890217621e-05 XM_003583719.2 MCTP2 PREDICTED: Bos taurus multiple C2 domains, transmembrane 2 (MCTP2), 0.0 7638 100.00 0.998349445885404 XM_005254955.1 MCTP2 PREDICTED: Homo sapiens multiple C2 domains, transmembrane 2 (MCTP2), transcript variant X1, mRNA. 0.0 4008 82.91 0.920537609054468 TCONS_00120499_4 sp|Q6DN12|MCTP2_HUMAN MCTP2_HUMAN Multiple C2 and transmembrane domain-containing protein 2; 0.0 1558 90.44 0.998861047835991 2 coding 1 0 1 1 -1.05771340439089 0.0172617283060254 -0.00782267838287526 0.882324220042428 CCCGGCGATGCCCCGGCCCCCGCCGTGTCCCGGCGGCTCTCGGAGCTCGCGAGTGGCGGCGGCAGCAGCCCCGAAGGCTGTGCCCGCGCAGGTAAGGGGCTCGCTCCGGCCCCTCTGCAGCTCCTGGGACTTGGCCTCTGACAGGTGAAGCCGCGCGGGCAAGCGGGGCGACCGGGCTGCTCCTTGCTCGTGCGAGGAGGGCAGGGGTGTCCGCTGCCAACAGAACTGGGGATCCTGAGCGGCCGGGAAGGGAAGCCAGTGGAGTTGCCGGTTCAGGAGTCAGAAAGGAGTCACTGAGTGTCCCGCAGAGACATACTCTTCCCCAGAGGGACTGCCTGTGTCTTCATGCAGCCATGGACCTGGATAAACCGTCTGTCTGGGGCTCATTAAAACAGCGGACCAGGCCTTTGTTGATCAACCTGAGCAAGAGGAAGGTGAAGAAGACCTCGAGCAAAGCCCTGGACTTACGGGCCCAGCATCACCTGGACCGCCGCCTGAGCCTGTCCGTCCCGGACCTCCTGGAGGCTGAGGCCCTGGCCCCCGAGGGGCGGCCTTACTCCGGCCCCCAGTCGTCCTACACCTCGGTGCCCAGCAGCCTGTCGACGGCCGGCATCGTTCCCAAGAGCAGCAGTAGCTCTTTGAAACAGTCTGAAGAACTGGATTGGAGTCAGGAGGAAGTGGGCCCCTTCCACGTGATAGAAACAGACTCCGAGGAGACTTTCACCTCTCCCACCGAGGACAGGAGAGCTTCCAGCAACGGCACCCTGGGTCTGCCCCAGAAAACGCCCCCTGGAGAGGATGCCCCCGAAGGGCCAGAGAAGCTCTGTGGAAGTGGTGATCTGAATGCTGCTCTGACATCTCAACATTCTGAAGAGCAATCTGGTCTCAGGGAAGCTGGCGATGGCTTGAGTAACCTGCCCAGCCCTTTTGCCTACCTCCTCACCATCCACCTGAAGGAAGGTCGGAACCTGGTGGTCCGGGATCGCTGTGGCACAAGTGATCCCTATGTGAAGTTTAAGCTGAATGGGAAGACCCTGTACAAAAGTAAAGTCGTATATAAGAACTTGAACCCAGTTTGGGACGAGATAGTCGTATTGCCAATACAAAGCCTTGATCAAAAGCTGCGTGTGAAGGTATATGATCGAGATTTAACTATATCTGATTTCATGGGTTCTGCATTTGTCATTTTGAGCGATCTTGAGCTTAACAGAACGACTGAGCATATCTTAAAATTGGAAGATCCAAACAGTTTAGAAGATGACATGGGAGTGATCGTATTAAATTTGAACTTAGTAGTAAAACAGTGTGATTTCAAGAGACACCGTTGGTCAAATCGGAAGCGGTTAAGTGCCAGCAAGTCCTCTTTGATACGCAACCTCCGGCTCTCAGAGTCCTTGAAAAAGAACCAACTCTGGAACGGGATTATAAGTATAACTTTGTTGGAAGGAAGGAATGTCTCAGGCGGAAGCGTGGCAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATAAAAGTAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTTCACTACTTCTCTGACAGGATGGGCATTTTGGACATTGAAGTGTGGGGAAAGGACAGCAAAAAGCATGAGGAACGTTTGGGCACGTGTAAAGTGGATATCTCAGCCCTCCCACTCAAGCAAGCCAACTGCTTGGAGCTGCCATTGGAAAGCTGCCAGGGGACCCTTCTGATGCTGGTCACCCTCACGCCCTGTTCAGGGGTCTCGGTCTCAGATCTGTGTGTGTGCCCCTTGGCAGACCCCAACGAGAGAAAGCAGATCGCCCAGCGCTTTTGCTTACAGAACTCCCTGAAAGATATGAAGGACGTCGGCATTTTGCAAGTGAAGGTTTTAAAGGCGGTAGATCTCTTAGCAGCAGATTTCTCAGGGAAGAGCGATCCCTTTTGCTTGTTGGAGTTAGGAAATGACCGACTTCAGACACATACCATTTACAAAAACCTCAACCCTGAGTGGAACAAAGTTTTTACATTTCCCATTAAAGATATCCATGATGTTTTGGAAGTGACAGTGTTTGATGAAGATGGAGATAAACCTCCTGATTTTCTTGGAAAAGTTGCCATTCCCTTGCTGTCAATTCGAGATGGACAAACAAACTGTTACGTGCTGAAGAATAAAGATTTAGAACAAGCTTTTAAAGGAGTTATTTACTTGGAGATGGACCTCATATATAATCCGATCAAAGCAAGTATTCGGACCTTTACTCCCAGAGAAAAGCGGTTTGTTGAAGATGGCCGCAAGCTGTCCAAAAAGATCTTATCCAGAGATGTAGACCGAGTGAAGAGACTCACCATGGCTATATGGAATACAATACAGTTCCTTAAAAGCTGCTTCCAGTGGGAATCCACGCTGAGAAGTACAGTAGCATTCGTGGTGTTTCTCGTCGCTGTCTGGAATTTTGAACTCTACATGATCCCTCTGGCTTTATTGCTCCTCTTTGTCTACAATTCCATCGGACCCACGAGAGGGAAGGTGGGCAGCATCCAGGACAGCCAGGAGAGCCCTGACGTGGATGAGGAGGACGATGAAGATGACAAGGAATCTGAGAAAAAGGGCTTAATTAAAAGAATCTACATGGTACAGGATATTGTCTCAACTGTTCAAAACATCTTGGAGGAATTAGCCTCTTTTGGAGAAAGAATTAAAAACACGTTTAACTGGACGGTCCCGTTCCTCTCATTCCTGGCCTGTTTGATACTGGCAGTGGCCACCATCACGCTGTATTTCATCCCACTCCGGTACATCATTTTAATCTGGGGCATAAACAAATTCACTAAGAAGCTTCGAAACCCCTATGCCATTGACAATAATGAGCTTCTGGACTTCCTCTCCAGGGTACCATCTGATGTTCAAAAGGTGCAGTACGCGGAGCTGAAGCCGGGCAGTAGCCAGAGCCCCGTTCGGAAGAAGCGCGGCGCACTCTAGGACACACCCTGACTCTGGACACCAGCAGCCGACGGCGTGCTGGGCTGACGAGACTGGTGTTCTCTGCTGTTCAGTGGTAGCCGTGGTGTCTTTCTGAAACGCGTGCCGTGTTGAGCCCTGTCTTTACCCTCCCCGTCTTCATGGCATAGATGCACGTGCCCATGGGCACATCCGTGTGCAGGGGTAATCAACTTTGCATCTGGAGTCAGCCCAGTGAAAGGAAACACTCCAGAGGCTGTAAAAGACTAACATCCCTTCTTCTAACAGGAGACTAAAGCAAGCTTCCAGGGGTCTCAGCACCCTCCTTAAGAACAGCCAGGATGCCACTTGGATGCAAGCGTGACTTTGAACTTGTTTTCACATCTCTAACAGTTTCGCATCAAGATTCAGTTACATTCGCTCGCACCCCCATCCTCCTTTCAGATGATTGCTTTTTTTTTCCCCCCTCTGAGTTAACAAGTCCTTGATAGCCACCATCTACCCAAATAATGTATATTATAAATAGATTTTTTTAAAATTATTACCTGGATCATCCCAGTTCTTTGGGGATCTTTCAGCCATAACAAGTAAAGACCTAGATGTAAAATTTCAGTAAGCTGCTTGGTGCTGGATGCCAGCCTGCCTCCTGGTCCACTGCTGGCAATGGATGCTCTAGAAAGTTCAGAGCGATCATTCGCCCAAAACGTGAAGGACTCAGTGAAAACATTTGGGTGCTTCAAATAGCCATTTCTTCTGATGTTACTTTTTGCTTATTTCCCAAATGTAATCTCAGTAGTATAGCTTGAGAAAGAGGGGGAGGGGGTGAATGAGTGAATTCTGAGAGTATTTAGAAAGATAGACTGAGGAGCAAGGGACGAGTGAATGTGGCTGCTGATCTGAATGAATCACTTGCCTGCACTTTTAAGAAAGTAAAAATGCTGTAGCAATCCACGTGGATCTTTTGTTCCTAAGCAAAATAAGCTACACATAATAAAAACATATATCTCAGAACCCCATTCCTAGACAGGTACAATCCCCAAAGTCTTTTTGAGTATATACTTTACCATTTCGCTGTAACCTCCTCCAAGTAAATATCCCAGTTTTTGTGCATATATAAAATGAATGCAAATATCTTTCTGTTCAAATGATATTTAAGTTGTAAAGACTATATTTTGTTGACACATACTTTGTATGTGCAGTTTTATATGTATATATCTATAAATATATGTATTGTAAAGAAAAATTGAAGTAAAAAGATCCGATTCAATAGTG EMBV3_39690 TTCAGAGAACCAGGCAACCCAGAAAGCCAGGATCTAAAACGATTCCTGTATAAAAAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08481 ACGAGGCTCAGCAGCCTGAAGGTGGTGGATCTGCACTCACAGAAGACCATGTACACCTCA Gene BVT0102_056524 + 0 NULL GK000021.2:22714919-22735035 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120743 1 XLOC_073256 Coding TCONS_00120743 XLOC_073256 Coding Coding WDR73 21:22725377-22740477 j TSS90123 4440 1 TCONS_00120743_2 370 0.588063063063063 8 0.706470627193854 8.83876855063775e-06 3.84736308002603e-05 8.80583586543106e-05 0.000121067884249283 0.000111420067162647 0.000368317190121063 1.59666766915604e-05 1.33214419578569e-05 0.00026833560884865 0.000501555247697225 6.05810151669688e-05 0.000123490677939436 1.09860082557571e-05 0 1.65736898786779e-05 0.00173068072677544 0.000493073545661732 0.00243517533750737 9.97457335753288e-05 3.63889405072925e-05 0.000401997389523215 0.00111233425449105 0.0010619781892469 0.00133278288698921 6.96318755793192e-05 6.01224315944362e-06 6.7288949456459e-05 0.00021522831831868 0.000443175022252457 0.000559912246019736 XM_005221845.1 WDR73 PREDICTED: Bos taurus WD repeat domain 73 (WDR73), transcript 0.0 6628 100.00 0.827477477477477 NM_032856.2 WDR73 Homo sapiens WD repeat domain 73 (WDR73), mRNA. 0.0 1287 81.10 0.296621621621622 TCONS_00120743_2 sp|Q6P4I2|WDR73_HUMAN WDR73_HUMAN WD repeat-containing protein 73; 0.0 615 80.69 0.997297297297297 1 coding 0 0 0 0 -0.0621105304991087 0.705239215267833 0.000884174659766826 0.985320376229189 GCGGAAATAGGATACCGGAAGCTACTGTTGCCATGGAGCCCGCGGAGGACTGGCTGGTGGAGTCCTTGCGCTTGTACCAAGATTTCCATGCATTCGACCTCTCGGGAGCCACTCGAGTGCTTGAATGGATTGGTGACAAAGGAATCCTGGTTGCTGGCTATGACAGCCTGAAAAAAAATGAGATTCTTCATCTCATACTGCCTCTCAGACTTTCTGTAAAAGAAAACCAGGGCTTATTCCCTGAAAGAGATTTCAAGGTACAGCATGGAGGATTTTCAGATAGGTCTGTCTGTGATCTGAAGCACGTGCCAGACACCAGGTTGTTGGTGACCAGTGGCCCTCCCGGGAGTTACCTGCAGGTGTGGCAGCTCGCAGAGGACAGTGATGTCATCAGAGCTGTTAGCACCATTGACGTACACGAGCGCGAGGAGCCTCTTTGGCCCAGGGTGGCCATTTTCCCATCGGTGGCACCCGGCGTCCTCCACGGCACGAGGCTCAGCAGCCTGAAGGTGGTGGATCTGCACTCACAGAAGACCATGTACACCTCAGGTGTCAGTGACGACGATGTGCTAAGTAGCCTGCAGGTCCTGGACACGGACACCTTCGCCTTCTGCTGCTCCTCAGGCCGCCTGGGGCTGGTTGACACCCGCCAGAGGTGGGCCCCGTCAGAGAACCTCAGCCCCGGCCCTGGGTCCACTGGAAGGCAGTGGTGTGCAGAAGCTGGCGGCCGGGGCCCTGGGCCCAGCATTGCCCGCCTTGGCTCAGACGGGCAGCTCTGTCTTCTCGACCCCCGGGATCTCTGCCAGCCCGTGAGCTCAGTCCAGTGCCCTGTGTCCATGCCCAGCCCTGAGCCAGAGCTGCTGCGAGTGACTTGGGCCCCTGGCCTGGACAACTGCTTGGCCATTTCAGGGTTCGATGGGACAGTCCAGGTCTATGACGTCACGTCTTGGGCTGGAGTGGGGCGCCAAGTAGAACCTCTCTTCACTCACAGAGGTCACATCTTCCTAGACGACAGTGGGATGGACCCTGCCCCGCTGGTCACCACCCACACCTGGCACCCCTACAAACCAAGGACTGTGTTATCGGCAGCCAGTGATGCCTCTCTGCATGTGTGGGACTGGGTGGACCCCTGTGCCTCTCGCTGACACCAGTGTCTTTCAGCCCAGGCCCTGGGAAGCTGCTGCGGAGCAAGGAGACGGATTCAGGCGACCACAGACAGCCCTGCTACCAGCTCAGTGGCTGAGAGCAAGTTAACCAGCCTGTCAGCCCACCCCAGGTTCTTTATTTGTAAAATGAGGCTGGTAATAACTACCTGGCAGGGCTGTTGGGAAAGTTAGAAGTAACATATTTTAAAATAACTGCTAGAAAAAATAAAATAACTGCTAGGATGCATGGCACAATAAATATTTGGTAACCGCTCTTAGCTCTGGAAGCCCCATTTCTCCCGAGTGCAGAATGGCAGTGTTTTACCCTGTCCGTGTTCACAATATAGAGAATCTGAAGAACAGGTTTTGTGAATTCTTCTACAGAACTAAAATGTATTGTGGTGTTGTATTAGCTGCTCAGTTGTGTCTGTCTCTCTGTGACCCCATGGACTGTAGCCTCCAGGCTCCTCTGCCCATAGGATTCTTGAGACAAGAATACTGGAGTGGAGTGCCATTCCCTCCTCCAGAGCATCTTCCCTGACGCAGGGATTTAACCTGGGTTGCCTGCATTGCAGGCAGATTCTTTACTGTCTGAGCCATCGGGGAATAGTGGCAAATAAACATAAAAAATGTCAACCCCAGTAGCAATGAAGGAAATAGCAATTTAAAAGAAGATTAAAAAAAAATATTACAAGGGAACAAAATAACATAAGACTTTGTATTTCAATATAAATGCCATTCTTTCACCTAATGCGGTCATCAGACCCCTGCATGTATGTTCAGTTCAGTCACTCAGCTATGTCCGACTCTTTGTGACCCTATGGACTGCAGCACACCAGGCTTCCCTGTCCATCACCAATTCCCGGAACTACTCATACTCATGTCCATCGAATTGTGGATGTATGTGGTAAAATCAAGAACTGGGCAGCCAGGATTACGCACCCAGAGAGGGCTGCTGCATTTGTGACTTACACTCGAAAGTTGAGGACCTGGTTTTTCTGAATTGATGAAAAAACCCTTGAGGAAAGTTCTCCACAAAAGAATGTACTGTTTTCTCAAAGTTTTACTCAGTAGTTGAATTTCTGGGACATTCAGGTATATTGATCCTAACCTTTCCTTGATGCAAAACTTTACTTGTGTGTGTGTATAGAAAGTTAGGTTCTCAGTAATTGTAAAAAGGCTTTCCCCTCCATCAGTGATTTTCAAATCTTAACATGCATCAGAATCACCTGGTTAAGACACAGACTGCTGGGCTCTGTTCCCAGAGTTTCTGATCAGTAGGAGTGTTAGCCAGGCTTCCCAGGTGGTGCTAGTGGTAAAGAACCTGCCTGGCAATGCAGGAGACATGGGTTCGATCCCTGGGTCGGGAAACTCCCCCAGAGGAGGGCATGGCAACCCGCTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGTTGGGCTACACTCCATGGGGTCACAAAGAATTAGACACGACTGAGCGACTTAGCCCTCTGGCACTCAGGAGTGTTAGCCGGGGTGTAGTCAGAGAAGCAGACCAGTACTTGTGGGAGCTGGGCCCACAGTCTCTGTAAGGTTGCTGTCTTTCCATTTATCCGCTGCTGGAGCCTGGGGCCCACAGGGCAGATGCCGGGGGCCACCACGGGAGATCCCACTCATGACAAAGGTCATGCGGAGAAGACCTGACAGGCAAAGGCGGATCAGGACTCGAGGGATTCCCTGGACCTGCTCGAGCATCTACCCTGAAAACAAAATCTGTCTACTGTTTATTATATTATGCCTTTCACCAACTCTTCTGACATTAACAGGGGGCTATCCCCAACCACCTTTCTCTGAAGAAAATCAACTTAGGGCTCTAGTTAATAAGTCTCCTGGGCTTGAAAGGAGCATTTTTACTTTAACCCCTCTGTTACTATTTTAGCTTGCTTGACAGGTTTATCCATCCTCTTGCAACTGACACACATGATTGTTCACAACACCCCAAGCATAAACTTCGAGCGATAAAAAAAAGCTTTATTAGAATAATACTATATTGTTGAGCCAATGTTTGCTACTGAGTTTCCTTGTCCTTTACCCAATGGTGCGCCTGGGAGTGCATTAGCTAGTATAGTTGGTATGCAAGAAAACAAGCAGTAGCCTTGGCATTAGCAATATAAGACCCTTGAGTTAGTAAGTTCTTTCTTTGTTGTAACCCACTGCACCTCTGCTCCATAAGAATGTAGCTGTGTTTCCTGAGGAGGACTGCAGATTGGGAAGATAAAGGGAAAGCAGGTTTTCTGGTTGACCAACCTTTATCAAGAAAGAGTTACAAAATGTTAACAGGCCACAGGGCCAGAAGATGCTGTACATAAGACCCTTGTTTATGAAAAGCTATGCAGAAAATGTCCTGGTTTCAATAAAGGTAAAACAGATGTAATGTTGAGCTGACTCTGCATGACTTTGTGTCTTTCACTTATGGAAATGTGTAACTCGGGGTATAAAAGCTCCCTTTGAAAATAAAGCTGCAGACCCGGCTTCATCAGAGCTTGGACTCCCCGTGTCATTCTTTCTCTCTCTCTTTCTCTTTTTTCGGGCTGATTCCTCGGAGCACAGAGGCTCTCTGAGTTCACTTTTTTTTGCCCAGGCTTCTAAGACCCAATCGAGGAGGCGCTCTGCGTCTCCACTCCAGAGAGAAGGCGCTCTGCGTCTTCACTCCATCGAGAGGTCGCCTGTGGCCTCCGTGAACAGAGCAAGTCCTGTGTCAGGGGCTTTATTGGCTTTCTCTGTAAACCAAGGAATATCAGCCTCTTTTTCTCTCCTTTACTTTCTCTCTCACCGACGCTGTCCATCCTGAGGGTATCCCTGGATCCTGCTGGGGCTGGACCCCGGTAGGCAGACAAGATGGGGAGGGTAAGGACCAGCTGGAACCTGTCAGTTCTTGATGCAGGTCACCTTCTGGAGAAGCGGGTACAGTCTAGCACTGAGCTAACACGCCCCTGGCCCAGGGTTGGGAGAAGCTTAAGGAGGATCTTGGGAAGATGGCATCGCTGAAGGTAGCTAACCAGCCACATGCGTGAGTCACACTGCTGCACCTGCCCCATCTCCTGAGCGTGGAGCCAGGATGGCTGCGGCTTCCCTTCTACCCACCACTTCTCACTCAGAAAAATCTTCAGTGGCCTACTCTACCTGGAAACACAGGGGGTGAACTCGGGCATGTAGTTCTGCCCAGACAAGTCACCACATTAAAAAGTCAACTTGGGCTTCCCTGGTGGTCCAGTGGTTAAGAATCCTTCTTTTAATGACACTGGT EMBV3_11858 TGTGAGAATTCCCCTCGAATGACAAAGGAACTGCGTGTGCTAACCTGGCGGCTTGGGAAA Gene BVV0102_261351 - 0 NULL GK000006.2:108090011-108146146 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26853 TGAAGTTGCGCCTCACCTACGACCACTTTGGCCAGTCGGTACAGGAAATCTTTGAGGTGA Gene GeneID:100126076|AP1G2:NM_001109808:11_cdna Constitutive 1 NULL GeneID:100126076 10 GENE AP1G2 MGC159942 adaptor-related protein complex 1, gamma 2 subunit EMBV3_04410 CATTTGTATGTTGCACCTCATTCAATGTTGAAGTCAGGCTGGAGAGAAATCCTGTGCTTC Gene BVT0102_085154 + 1 EMBV3_13948 GK000018.2:47044485-47062552 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083508 TCONS_00083509 TCONS_00083511 TCONS_00083510 TCONS_00083512 1 XLOC_051292 Coding TCONS_00083512 XLOC_051292 Coding Coding ZNF146 18:47044941-47063865 = TSS62748 2325 1 TCONS_00083512_3 292 3 0.87729218411457 1.75556891886149e-05 7.51280562682671e-05 1.37092026327776e-05 0 5.93603590684104e-09 0 3.29836376147615e-10 7.91044579287304e-09 8.84925181251965e-09 7.59632867888221e-12 1.95259527008218e-09 6.14521752962025e-10 0.000146651747129056 7.58682097533712e-06 3.2722133361176e-05 0.00536987431973836 0.0055359339516745 0.00244635308828078 7.35139395375263e-09 1.15990307132421e-05 1.95867572839257e-09 0.000380171882329736 0.00132484304694984 0.0045894504697327 7.28794032206032e-35 6.75631155045278e-20 8.73030993096741e-05 0.000162145848114464 0.000188963597369211 4.08958227943024e-65 XM_003583412.2 ZNF146 PREDICTED: Bos taurus zinc finger protein 146 (ZNF146), transcript 0.0 4168 99.74 0.999569892473118 NM_007145.2 ZNF146 Homo sapiens zinc finger protein 146 (ZNF146), transcript variant 0.0 1938 80.71 0.874838709677419 TCONS_00083512_3 sp|Q28151|OZF_BOVIN OZF_BOVIN Zinc finger protein OZF; 0.0 584 99.66 0.996575342465753 10 coding 0 0 0 0 -0.00574250182394614 0.967609005290488 0.0284980775295165 0.601877785009627 GGCGCAGCGCACCGAGTGGACATTTTGGTCTTTGTCCGCGGGTCAGTCCGGCCCCTGGGTCCACGTGGCGCGAAAATAGGAGGGTCATTTCCTTGTGCACCGTCCTCATCCTTCAGAAGGCCGGGAGGCCCCAGGGCTCAGCCGAGTTCTAGGAGAGAACTTTGGCTCCAGCATTAACATTTTAGTGCTGTGTCATTTCCCCAGTAGCAGGTTGTGAACTGATCAGGCTGGATGTGATCCTCTGTTGAAGCACGAAGACGAACTCTGGATGGTGGAGAAAGAAGTGGAAAGGAAGTTTGTTCAGAAGAAGCTTGAGAAGATGATGAACGGATAGATTGACAAGACTTGGGAGACAAGTTGCATCCAGCTTCAATAAAGTACAGACAGAAAAAAAGCAGTGACTAAGAAAATTGGAAAAGTGCTTCCTCTGATATCAGACTATCTTTTAAGGGAACAACTTTTTCAACCTAGAGTTTGAAACACAATTTAGAGTTAGTTGTGTAGGAAAGAATCATCAATTTAGATTGTGTGGAAATCTGCCACAGCTTACTCCTTGTAGTAATAATAACCCTTTTTGTAAAAGGGTATAAAATCAGTGTGGAAATGCCTTCATTAAAAATTTGAATCCCACATGATATCAGAGCATTCATACTGGAGAGAACACCTATGAATTTACTGAATGTGGGAAAACTTTCATTTGTATGTTGCACCTCATTCAATGTTGAAGTCAGGCTGGAGAGAAATCCTGTGCTTCTAAAGAATATTGAAAAGCCTTTACCTAGATAACATCTCATTGAGCAGAAGAAAATTCATACTGGAGAGAAGTCAGTGAAGGTTATAAATCTTCACTGAATATTTTAGAAAATTTAGAGTTAGAGAGCTCTGAATGTACTGATTATGATAAAGTTTTCTCTTGAACCTTATCTCTTACTCTGTATTCGAAAGGCCATACACAGAGAAGCCCAGCACATGTAAGAAATGTGGAAATACCTTCAGCTAAAAGTAAATTTTCATTTATCAAAAAATTCATACAAGAAAGAAACCTTGTGAATGTGGGAAAGCTTCCATTCAGATGTCACACCTCAGTCAGCAGAGAATTTGTAGTGGGGAAAACCCCTTTGCCTGTAAGGTATGTGGGAAAATCTTCAGCCACAAATCAACTCTTACTGAGCATGAGCATTTTCATAATAGAGAGAAACCTTTTGAATGTAATGAATGTGGAAAAGCATTCAGCCAAAAGCAGTATGTCATTAAACATCAGAACACCCATACTGGAGAGAAGCTTTTTGAATGTAACGAATGTGGAAAATCCTTCAGCCAGAAGGAAAATCTTCTTACCCATCAGAAAATTCACACTGGAGAAAAACCTTTTGAGTGTAAGGACTGTGGGAAAGCTTTCATTCAGAAGTCAAACCTCATCAGACACCAGAGAACTCACACAGGAGAGAAGCCCTTTATATGTAAGGAGTGTGGTAAAACCTTCAGTGGCAAGTCAAACCTTACTGAGCATGAGAAAATTCATATTGGAGAGAAACCCTTCAAGTGTAATGAATGTGGAACAGCTTTTGGTCAGAAGAAGTACCTCATAAAACATCAAAATATTCACACTGGAGAGAAACCTTATGAATGTAATGAATGTGGAAAAGCCTTCTCTCAGCGAACATCACTTATTGTACATGTGAGAATTCATTCAGGTGATAAGCCGTATGAATGCAATGTATGTGGAAAAGCCTTCTCTCAAAGTTCATCTCTTACTGTACATGTGAGAAGCCATACAGGTGAGAAACCCTATGGTTGTAATGAGTGTGGGAAAGCTTTCTCGCAGTTCTCAACCCTTGCTCTACATTTGAGAATACACACAGGTAAGAAGCCTTATCAGTGTAGTGAATGTGGGAAAGCTTTCAGCCAGAAGTCACACCACATTAGACACCAGAAAATTCATACCCATTAAAACCCTGTGGATATCATGAAAGGTGTTCATCAGGAATTTACACCTTACAACACATCAGAAATAAGGAAGGCATCACAAATGAGGGAAGCAAAAGCTAAAAACTTAAAGGACACCAGAGAATTCATCTTGAAGAGAAAGACATTTGTATGATTGAAGTCCTGTATCCAATAAAAACCATACTGCAAAGGTAATACTGAAAACTTAAGATGCATTTCCACTAAAATTGGGAGTGGAGGACATTTTTATGATTGCCATCTGCATGAATCTGGAGATCTTCACCAGTGTAATAAAAACAAAGCTATAAGCATTAGAAAGAGACTTCTATGGTATTGATTTAGCAGAACAGAAGAGATTCTGCAAAACCTATGCATTTA EMBV3_14346 ATCCGAACATCCTTGGCCAGCTGGGGAGGAGCCAGCTTTTGTGGGACATGAAATTCATCA Gene BVT0102_361815 + 0 NULL GK000025.2:38709284-38755173 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149558 TCONS_00149559 1 XLOC_091433 NonCoding TCONS_00149559 XLOC_091433 NonCoding NonCoding - 25:38723126-38723505 - TSS112094 379 2 TCONS_00149559_1 46 1 0 7.17978946132286e-05 2.65130315377501e-05 0 0 0 7.55052399797385e-05 0 0 0 1.08561899361115e-05 1.20801310903709e-05 0.00112270690989035 0 0 0 2.61278912433663e-10 0 3.53836161336894e-07 0 0 0 0 0 0 0.00107857648811566 0 0 2.17011385658203e-05 0.000102471625953948 0 0 noncoding 0 0 0 0 -0.0841151997824119 0.448719128268167 0.0625844408896924 0.219506769997924 GCAGGGAAAAGTATAAAGTTGTGTCAAGCACAGAAAAGAACTGTGGGATTTGTCTGAGGTCTGACTTGTTTGTGGTTTTCTAAGCTTTCTAAAATTTCTAAGTTATGAATTCTTTCTCATTGTAAGCAATTTCGCTTTGATACTCAATTCTGTGCTATTTTTCTTGAAGAGGGTGTTCCAAATGATGAATTTCATGTCCCACAAAAGCTGGCTCCTCCCCAGCTGGCCAAGGATGTTCGGATGGGGCAGCTCGCTGGGCTCTCTCTACTTCTCCTGGTCCTCACCACCCTCAGAAGGCGCACCTTTGGGAAACCGCGTCTAGAGGGGGCCACTGCCACACTAGACCCGCCTCACCACCTGCAATCACACCAGCCCTCTT TCONS_00147316 . 3' 5316 TCONS_00147316 . 3' 5694 EMBV3_37573 TAGCACTGGAGTGTGGACTCAGCCTTCTGTTCTCTGAAGTTGCTCTATGGTTGCCTGAGT Gene GeneID:539162|NIPA1:XM_002685192:25_cdna Constitutive 0 NULL GeneID:539162 2 GENE NIPA1 NULL non imprinted in Prader-Willi/Angelman syndrome 1 EMBV3_13386 CATCGAACTGCCCACAGTCATCCTGAAGGTTTTGAAACAGAGGCAGCAACTATCAGCACC Gene BVT0101_010109 + 0 NULL GK000025.2:10584325-10596986 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146252 1 XLOC_089059 NonCoding TCONS_00146252 XLOC_089059 NonCoding NonCoding - 25:10587313-10591547 - TSS109404 1541 2 TCONS_00146252_2 102 0.464633354964309 3 0.636664304275927 0.002832454277099 0.00251995644809411 0.002989275452025 0.00125623731498351 0.00235372900363482 0.000742084904402928 0.0011370507824998 0.000687631452584869 0.00138655093881573 1.06800444674287e-05 0 2.32036531561095e-05 0.000125456228883694 0.000299150868993069 0.000155762455535022 0 0 0 0.00246123867253661 0.0015663615235688 0.00119719583108432 0 1.77633635359748e-12 0 0.00263142094368967 0.00401459759115909 0.00372431838534464 0 1.57514816937352e-05 0 XM_005196970.1 ZNF764 PREDICTED: Bos taurus zinc finger protein 764 (ZNF764), transcript 2e-25 122 80.15 0.0876054510058404 0 noncoding 0 0 0 0 1.15781863814872 0.0405862653232881 -0.411048696497003 0.0009929740853183 AATTATCCAACCACAACTCTGTCTCCTATAAAAGAAACGCAGTGCTGTGCTCAAGGTTTCATCTTGAGATGTGTTTGCCTGTTCGTTGTTTGCCTGTTTGTTATTAAGGAGATTCATTAATCAGATAAGACTCGTCATGATCCCAGCTACTCAAGCTCGTGATCAGTGGACCTGGTTTCAAAGACTAAAGCAAGAATTCTGCAAGCCCATCTTGACAATAATTGCTTCTGGCATCGTTTTATTCCTTATTTCTGGAGGGATACTCTTGTATGGATTATGCCAAAACTCAGACTACACCTCTCTCGAACCAGAAGAATTAGTGAGGTATCATCGAACTGCCCACAGTCATCCTGAAGGTTTTGAAACAGAGGCAGCAACTATCAGCACCTCACTATGATATATATTAAACCCAGATATCACTGGGTCTTTTAACCTTCTGAAAGTTCCTTGAGTATAAAGTAGAAATAAACTCTGACCTCTAAAAAGTTTTGTTTTCTGAGTTTGGAATGTGTTTGTTCTCTCTTGCCTGTATGAAATCGTTCTTCTTCAGAAGTCCTCTCTGTCTCGAATTCATCTTGAAACTAGTTTTGTCCTGCGTGTTTCTGCAGCTCCCAAGCTGCTTCTTCTCTTCCTATCATCACTGGTGCTTCTCATCTGGGTCTTCACTGTCAACTCCTGCAGATTTCAACAAGCACAGAGGTGACCCCTTCAAGACCACAGGGGCCGAGCTCACAGCCCTCATGACATGCCATGTCCTGTTCTTTTCTCACCATCCATGGTCATGTTTTGTACCTTGTCATAAATGCTACCTGTGAGACCCCTAGAACATCATTGCAGACACCTCACTGGCTCATCACACTTCCCTCAGGGAAGTTCTGAGCTGCTTCTTGGTGTCTAAGAAAACTAGAGCCAGCCAGTAGTTAAAGTAATAAAATTAGATTTTACTCAGGAAATATTGTAATGGGAAAAGAGACCCCAGCATAGAACTGGGCTCAATTCTTCTTCTTTTTTTTAAAATATGTATTTATTTAACTGAGCCTAGTCTTAGTTGTGGCATGCGGAATCTAGTTCCCTGACCAAGGATCGAACCCAGGCCCCCTGTATTGGGAGTGCAGAATGTATGCCACTGAACTACCAGGGAAGCCCCCTGGGCTGAGTTCTGCCTACAACATGTTCAAGTGGGAATTTATGGTGCAGGTGAAGTTTGGAAATCAGTCACTGGGTAGAAAATTACTGAGGAAACATTAGGGGTATGTGGGAAGGACATGGTGAATCTGGCTAAATCAACCTAACAGGATTTTTGCAGAAGGCAGGTCAAGGTGAGATCACCTGAGAGCTGCGGTGGGGAGAAACAGGAATCTGATCAGCCATCAGGGGTGGGGGTTTCTAACTAAACCAACTTAGCAAATTTCCAGCTCAGATTGGAAGATGCAAAGACCAGCACAGAAGTGCAGAAGTTGAGTCCTGATTGGGATGAGGACTCAGAGGAGCCAGACTAAATCTGGGTCAAGAAGAGACACTTTGTCATTGAAAGTACCCCC TCONS_00146250 s 5' 2573 TCONS_00146250 s 5' 3901 EMBV3_01884 GTGACACCCATAACTTATGCTAAAACATCAGGGTAGTGTGGTTTCTAGACTTGTATTGGT Gene GeneID:504698|TFRC:XM_002684820:250_cdna Constitutive 0 NULL GeneID:504698 1 GENE TFRC NULL transferrin receptor (p90, CD71) EMBV3_42238 GCTTGTAGCCATGATGGCTGCACAACTTTGTGAAATACTAAAACCCACTAAATTGTACAC Gene GeneID:508455|LOC508455:XM_002695168:791_cdna Constitutive 0 NULL GeneID:508455 18 GENE LOC508455 NULL similar to Putative steroid dehydrogenase KIK-I EMBV3_20067 TGAAGAATTTCCCTACTTTTATACCATGGTTTCTCCAACATATTAGCTTCTGATGCCTGC Gene BVT0102_074517 + 0 NULL GK000017.2:45218105-45254529 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075303 TCONS_00075298 1 XLOC_046544 Coding TCONS_00075303 XLOC_046544 Coding Coding ZNF268 17:45191288-45225272 j TSS56818 4455 1 TCONS_00075303_9 970 6 0.869081599623341 6.18924974745267e-37 1.5252759757104e-46 1.02887257315185e-15 1.83856881870430e-11 5.59958017862249e-88 1.23189046198133e-11 1.7036786156783e-06 1.60058712447259e-06 1.11651586186223e-06 0.000173338842049903 3.82992423619339e-05 0.000272749939575598 0.000145584052449367 7.47634032275866e-13 0.000114295225351317 0.00176105455406591 0.000338816987341711 0.00123983821489417 2.88095903873995e-20 3.256334128672e-72 8.22706219361286e-12 0.000874604961935365 0.00118836378286566 0.00093466789593499 2.45473404280635e-11 8.73240021852024e-22 1.73444752557352e-11 0.000158078668245326 0.000301726746864283 0.000129687368845698 XM_005217646.1 ZNF268 PREDICTED: Bos taurus zinc finger protein 268 (ZNF268), transcript 0.0 6430 100.00 0.8 NM_003415.2 ZNF268 Homo sapiens zinc finger protein 268 (ZNF268), transcript variant 0.0 3268 82.01 0.733333333333333 TCONS_00075303_9 sp|Q14587|ZN268_HUMAN ZN268_HUMAN Zinc finger protein 268; 0.0 1556 80.72 0.970103092783505 8 coding 0 0 0 0 0.00497711758106517 0.961238902319965 0.0524755111931682 0.531294326176713 ATCCACTCGGCACCAGCCGGGGAGAGCCCTGTTCGGTGGGCTGAGTCCCATGCCGGTCGCGGTGACCTGAGCTGGTGCCGGCCGACCTCGGCTGCCCGAGGGCCGTCGCCGAAGCGCTCAGAGCGGGTGACTCAAAGTCGAGAGGGAGAACGAGCAGATCTGGTTGCAAGATCCAGGAGGGAACTCAAAACTGGCTGTGGGGATGGCCACCAGGGTCCGGACAGCTGCCATCTGGGTGCCACCTCTCCAGGAGCGAGACAGTTCATGCAATGTGAGCAGAAAGCTCCAAAGTGAGAAATCCATCCTGGATCAAGGGACCCCTGACCAGAAGCCTCTCTCTGGAGGACCCTGGCAGAGGCCCAGGAGACCTGGGGTCCTGGAGTGGCTGCTTATTTCCCAGGACCAGCCGAAAGCCAAGAAATCCTGGGGACCATTGTCATTCATGGATGTGTTTGTGGACTTTACCTGGGAAGAGTGGCAGCTGCTGGACTCAGCTCAGAAGCACCTGTACAGGAGTGTGATGTTGGAGAACTTTAGAAACCTGGTGTCCCTGGGATATCAATACACCAAACCCAGTATCATTTTCCAGTTGGAACAAGAAGAGCTGTGGATGATGCACAGCCCAAGTCAGGGCCATTCAGACGAAGTCTGGGAAATTGATGGTTGTGTGGAATGGCATCAGGAAAATCAAGGCAAGCTGGGAAGTATGGCAGAAGGCTATCCCTGTACTGCTTTTGGAAAACTGTGTCTTATTACTGCAAATAATGCTTCTTCAAGACAGAGACTTCATAAATGTGTCACAAATGGGAAGAGTTTGAAATGTAATATAGGTCTCAGTAATAATTACGCTGGAAAGAATCCTAATGACATTCATGCATTGAGGGAATCATCCGTCCTTTCTAAACATGAACAAGCTGTTATTGGCATAAAATACTGTGAAAGTGATGAATCTGGAAAAACTGCCAACAGAAAGCCACTGCTTATTTGCCAACAAATGCATATGGGAGGAAAATCGTTTGAATGCAATTCCTGTGGGAAGGCCTTCAGCAGCAAGTCGAACTTTGTGGTGCATCAGGAAACTCATGAAGAAGCAAAACCCTACAAGTGTGATGGATGTGGGAAAGACTCCAGCAACAAGTCCTACCTCGTTGCACATCAGAGAACTCACAAAGGAGAGCAACTACATGAATGTAGTGATTTGAAAACTTTTAGTTTCAATTCACAACTTGTTTTACATCAGAGAATTCACACACAGGAGAATCCCTATGAATGCTGTGAATGTGGGAAAGTCTTCACTAGGAGAGACCAGCTTGTTTCCCACCAGAGAACTCATTCAGGACTGAAACCCTATGGATGTCATGAATGTGGGAAAGCTTTTGGTTTGAAATCACAGCTCATTATACATCAAAGAATTCATACTGGAGAGAAACCCTATGAATGCAGTGATTGTCGGAAAGCCTTTAATACAAAGTCTAACCTCATGGTACATCAGAGAACTCACACAGGAGAGAAACCTTATAGTTGTAGTGAATGTGGGAAAGCTTTTACTTTCAAGTCACAGCTCATTGTACATCAGGGAGCACACAGTGGCGTCAAACCCTATGGATGTAATCAATGTGGAAAAGCTTTCAGTTTAAAGTCACAACTCATTGTACATCAGAGAAGTCACACAGGAGTGAAACCCTATGGATGCAATGAATGTGGGAAAGCTTTTAGGAGCAAGTCGTACCTTGTTATACATCAGAGAACTCACACAGGAGAGAAACTCCATGAATGCTGTGAATGTGGGAGAGCCTTCAGTTTTAATTCACAACTTGTTATACATCAGAGAATTCACACAGGGGAGAATCCCTATGAATGCAGTGAGTGTGGGAAAGCCTTCAGTCGGAAATACCAGCTCATTTCACACCAGAGAACTCATGCAGGGGAGAAGCCCTATGAATGCAGTGATTGTGGGAAAACTTTTGGTTTGAAATCACAGCTCGTGATACATCAGCGAACTCATACAGGAGAGAAGCCCTATGAATGTAGTGAATGTCAGAAAGCCTTTAATACAAAATCAAACCTTATTGTACATCAGAGAACCCACACAGGAGAAAAACCATATGGTTGTAGTGAATGTGGGAAATCCTTTACTTTTAAATCACAGCTCATTGTACATCAGGGAGCACACACTGGGATAAAACCGTATGGTTGTAACCAGTGTGGGAAAGCCTTCAGTTTGAAGTCACAGCTCATTGTACATCAGAGAAGTCACACAGGATTGAAACCCTATGGGTGCATTGAATGTGGGAAAGCTTTTAGGAGCAAGTCCTACCTCATCATACATACAAGGACTCACACAGGGGAGAAACCACATGAATGCAGTGAATGCGGAAAATCCTTCAGTTTTAACTCACAACTTATTGTACATCAGAGAATTCATACAGGTGAGAATCCCTATGAATGCAGTGATTGTGGGAAAGCCTTTAATAGGAAAGACCAGCTTATCTCACATCAGCGAACTCATGCAGGGGAAAAACCTTATGGGTGTAGTGAGTGTGGGAAAGCCTTTAGTAGCAAGTCATATCTCATTATACACATGAGAACTCATTCAGGAGAGAAACCATATGAATGTCACAAATGTGGGAAAGCCTTCATTTGGAAGTCACTACTCATTGTACATGAGCGAACTCATGCAGGGGAAAACCCTTATAAATGCAGTCAGTGTGAGAAATCCTTCAGTGGGAAATTACGGCTCCTTGTACATCAGAGAATGCACATGAGAGAGAAGCCCTATGAATGCAATGAGTGTGAAAAAGCCTTCATTAGGAAGTCTCAGCTCATTGTACATCAGAGGACTCATTCAGGGGAGAAACCCTATGAATGCAGTGAATGCAGAAAAACTTTCTCTCAGAAATCAATTCTCAGTGCACATCAGAGGACTCATACTGGAGAGAAACCCTGTAAATGCACTGAATGTGGGAAAGCCTTTTGTTGGAAGTCACAACTCATTATGCATCAGAGAACTCATGCAGATGAGAAACATATTGGTGAGTTAAATATCAGAAACTTTTTCTCAAAAGTGAATTCACCGGAATTCCTAGAAAATTCATACAGAGGAGAAACTTTATAATTGGAATCATTGTACACCATGTATGTATGGCATGTGGAAAGGAATCCACAGAAAGCTGTTTTTTATACACACACACACACACAAATCAGTAAATGTACACAGGAACTGTATGAATTCAGTGAACCCTCTGAAAATTCTTAGCAGGAATTCACAACATGTCTTTAATTTGTGCAGTTGAGGAACAATATGAATGAAGTGAATATCAGAAACTCATTTCTTAACATGCTAACATCTGCAAAGAGTTAATTCCATAATGCAAATGAATATAGAATACAGTCCTTTAAAATTCATAATTTATTGGAATTAGGATTTTAATGAGAAAAAAGTGTTAATTGAATGTATTGCAGGCATCAGAAGCTAATATGTTGGAGAAACCATGGTATAAAATTAGGGAAATTCTTCATCTAGAAATGACAGGCTTCTAATAAAGTAAAATTTTGAATGAGTGAAGATCTATGAATATTTTTTAAACCTCTACAGGAAGGTTTACTATTTTGATTCATCTGGAAAAAATTTTTCCCTTATAAGTTTAGGGGAAATTATGCTTCAAATTATGCTTCTAAACTCTTAGGGAAAGCTTGTAAAAAAATAACTATCCAACTATCAATGATAGACATTTTATAGAATATAAAGATTTTCTTACCTGAGTAAATGTAATCATGATAATAATAAGGATCACATCAGAAGCCCTGCAGCAATGTTTAGGTGTTTTCTTCCTTTCTGTACTATAAAATGTGTTTTGTGGACTTCGACATATTCTTACGGATGCGACATTTGATAAATAAATTAACTAGATAGCAATACTGTTTCCCAGGGATTTATACTCTGCATAGCAACATCTTTCTTTAAAATACAACTTGTTACTAGAATAATATGGCATATAAATGCATTTCAGTACTTTAAAACTTCTACTATTGTTTTGTACTCTCTGTAAATGGACCTGAAAGCTCTCTCTTCAGTTATATAATCAGTATAGCTCACGCTTCATGTGATTGCATATCTGGAATCTGTCCTGCCCTCTTTGATTAGAATACCTTGATTTCCTTTAAGAGAACTGACAGTGTATGCAATGTATACATGATCAGATCGTCATTCAGGGTACCCTACCAGGAGTTGGCTGAGATAGTCCAGAATTTAAATTTTTAATGGACTCTTTAGTACAGAAAATTAAACTTAGCTTTTGTTCTCAGGTAACATCTTGCTGCAAATATTAATTAGTTCCTTCTACATAGATTACCCAGAATAGCTTTAGTTGTTGTCACTTCTTAATTCTAGTTTGCTTCTCTCTTAATTTGAGCTATCTGGTATCCTCTCAGTACTTTTAAATGATACCTTTAAGT EMBV3_26903 CACACAGAACAACTCTTTCTCGGTTAGTAGGGGTGCTGTTGGCTCACCTATCCACTCCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25162 TGAAAAAACTGCTGCATGACCCTGAGCCATCTCTTCGCATCATCGCCTCCCAGGCTCTAT Gene GeneID:788470|LOC788470:XM_002692312:57_cdna Constitutive 0 NULL GeneID:788470 13 GENE LOC788470 NULL similar to Uncharacterized protein C1orf175 homolog EMBV3_10678 TGCCAAACACCTCTGCAAACAATGCCCAGTTTTCTATGGGGAGACAGGAGATCGAGTGAG Gene GeneID:539002|CCR2:XM_002697094:202_cdna Constitutive 0 NULL GeneID:539002 22 GENE CCR2 NULL chemokine (C-C motif) receptor 2 EMBV3_18669 TTAGAAAGCTGTTAGCTCCAGACTGCGAAATCCTACAAGAAGTGGGAAAACTCTACCCCC Gene GeneID:533245|EXOSC3:NM_001035397:32_cdna Constitutive 0 NULL GeneID:533245 8 GENE EXOSC3 MGC127537 exosome component 3 EMBV3_04705 CATCCCATTCTTCTGCTACCGAATCTTTGATTTTGCCCTGAACACCTTGGTTGTGGTCAC Gene GeneID:524129|LOC524129:XM_002690060:5_cdna Constitutive 0 NULL GeneID:524129 9 GENE LOC524129 NULL similar to Lysosomal associated protein transmembrane 4 beta EMBV3_30831 GGTAAGCATTAGTTGCTCCATGAAGTGAATGTTCAGTGGTGGCCCAAGGAGTGATGGTGG Gene GeneID:537688|PRPS2:NM_001114152:11_cdna Constitutive 0 NULL GeneID:537688 X GENE PRPS2 NULL phosphoribosyl pyrophosphate synthetase 2 EMBV3_17321 GCTGGTAGCGATCCCCTATGTCTACAGCACGTTTGTGTCTCTTCTCGTCACCGTAAAATT Gene GeneID:785914|LOC785914:XM_002693678:316_cdna Constitutive 0 NULL GeneID:785914 15 GENE LOC785914 NULL similar to cOR8V11 olfactory receptor family 8 subfamily V-like EMBV3_17006 GGAGAGTCTTAAAGGAGGTTCTTTGTCTGTCAGTGGTGATGGGAGAAGAGGTTCTTTGCC Gene GeneID:538541|TSPYL1:NM_001076111:28_cdna UTR3_Alt 2 NULL GeneID:538541 9 GENE TSPYL1 NULL TSPY-like 1 EMBV3_29883 CCATGCCCTGGGGTGACCCCAGCTACAAGAGCGCCTCGAGGGCCGGGCAGAACCGCATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01337 GGCGAAACAACTTTAGACCACTGCCCAACCAAGTTAAGCCTGAGCGAAGACAATCTCCTT Gene GeneID:520702|WDR63:NM_001099013:50_cdna UTR3_Alt 2 NULL GeneID:520702 3 GENE WDR63 MGC159783 WD repeat domain 63 EMBV3_38940 CACGGCTGGCAGTCACCATCTGCAGTGATTTTAGAGCCCAAGAAGAGGAAATCTCTCACT Gene BVV0102_229378 + 1 EMBV3_19593 GK000009.2:21766488-22191723 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01094 GACGTCGAGACCAGGCATTCGGTAGTGTTTATCCATCTAGATCAGGGGTCTGCAAACTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35755 AAGCACAGGCCGGGCGCTTCTTGAGAATCCACGTATTAGGTTTGTACTGGGTGCTAAGCA Gene GeneID:614755|TMEM8C:XM_002691663:412_cdna Constitutive 0 NULL GeneID:614755 11 GENE TMEM8C NULL transmembrane protein 8C EMBV3_35457 CCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAG Gene BVV0102_001619 + 0 NULL GK000015.2:17323067-17365412 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177279 TCONS_00071184 TCONS_00240474 TCONS_00157937 TCONS_00241273 TCONS_00023027 TCONS_00019989 TCONS_00064860 TCONS_00123172 TCONS_00224115 TCONS_00023028 TCONS_00253241 TCONS_00220656 TCONS_00123617 TCONS_00130261 TCONS_00124121 TCONS_00233580 TCONS_00135549 TCONS_00165811 TCONS_00162457 TCONS_00249014 TCONS_00238440 TCONS_00156739 TCONS_00020176 TCONS_00206863 TCONS_00091329 TCONS_00107450 TCONS_00087858 TCONS_00251889 TCONS_00148277 TCONS_00019196 TCONS_00023334 TCONS_00017462 TCONS_00251704 TCONS_00117178 TCONS_00223458 TCONS_00055859 TCONS_00063138 TCONS_00122012 TCONS_00139971 TCONS_00141422 TCONS_00109885 TCONS_00056147 TCONS_00207067 TCONS_00098384 TCONS_00190575 TCONS_00254568 TCONS_00131040 TCONS_00251004 TCONS_00249913 TCONS_00250196 TCONS_00250893 TCONS_00208725 TCONS_00230245 TCONS_00122326 TCONS_00177025 TCONS_00240675 TCONS_00252355 TCONS_00088291 TCONS_00032586 TCONS_00251295 62 XLOC_131641 XLOC_107053 XLOC_042956 XLOC_147138 XLOC_096391 XLOC_147937 XLOC_013697 XLOC_010667 XLOC_039584 XLOC_074726 XLOC_137411 XLOC_013698 XLOC_156182 XLOC_133973 XLOC_075169 XLOC_078972 XLOC_075673 XLOC_143062 XLOC_081772 XLOC_100651 XLOC_099338 XLOC_151957 XLOC_145107 XLOC_095199 XLOC_010854 XLOC_125383 XLOC_056104 XLOC_063360 XLOC_052647 XLOC_154830 XLOC_090159 XLOC_009876 XLOC_014001 XLOC_009039 XLOC_154645 XLOC_071344 XLOC_136758 XLOC_033667 XLOC_037865 XLOC_073568 XLOC_085033 XLOC_085850 XLOC_065789 XLOC_033950 XLOC_125586 XLOC_058630 XLOC_116610 XLOC_157500 XLOC_079745 XLOC_153947 XLOC_152856 XLOC_153139 XLOC_153836 XLOC_127237 XLOC_139737 XLOC_073881 XLOC_106799 XLOC_147339 XLOC_155296 XLOC_053078 XLOC_018826 XLOC_154237 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_36747 GACCCTGCTGGGCATCATCGCCCCCTTCTGATCACGCGCGCCAGCTGACCAAGAACATGA Variant GeneID:535174|DCI:NM_001046396:234_cdna 580^758 1 EMBV3_00375 GeneID:535174 25 GENE DCI MGC134174 dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase) EMBV3_05657 AATAATGCACCCTGAGCTTTGCCAGAAGATGGTGTTGACTGCCTGGTTAGGTGGTCTTGG Gene GeneID:782475|LOC782475:XM_002697475:125_cdna Constitutive 0 NULL GeneID:782475 23 GENE LOC782475 NULL similar to olfactory receptor 1368 EMBV3_19879 TTATGATGCTGTGAGATGAAAGGGGGTAAATCAGGGATGGGTCGTGGGGGAGGGTGAGAA Gene GeneID:506953|ITGA7:XM_002687422:168_cdna Constitutive 0 NULL GeneID:506953 5 GENE ITGA7 NULL integrin, alpha 7 EMBV3_14024 CTTGTTTCACTAGGAGCTTCCACAAGTTTCAGCAGGGCTCACCTCAGCAGCGTTTCTGGT Gene GeneID:508872|MGC139126:NM_001098000:94_cdna Constitutive 1 NULL GeneID:508872 10 GENE MGC139126 MGC139126 hypothetical LOC508872 EMBV3_05199 GTTTTCTTCCTGGTTTTTATGACAACCCTGTTCCAGCCACTGTCCTCACGAGAGAAGGAC Gene GeneID:614876|LMO2:NM_001076352:66_cdna Constitutive 0 NULL GeneID:614876 15 GENE LMO2 MGC139114 LIM domain only 2 (rhombotin-like 1) EMBV3_30844 TGCTGTTAGCCCAGGTAGATGGCTCTCCAATACCACAACAGAGTTCAGCAAAGAGAAGGC Gene GeneID:282270|LEAP2:NM_174559:5_cdna Constitutive 0 NULL GeneID:282270 7 GENE LEAP2 LEAP-2 MGC133595 liver expressed antimicrobial peptide 2 EMBV3_03717 CCCACCTTCAAGCACCATCACCTTGGGCTTAGAGCTTCAGTTTCAGGGAGACACCAACAT Gene GeneID:100300634|LOC100300634:XM_002697843:558_cdna Constitutive 0 NULL GeneID:100300634 24 GENE LOC100300634 NULL hypothetical protein LOC100300634 EMBV3_20608 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24355 CACGCGGATATCACATGCCTCCTTGAATCCATTCCGTGTAGACTCTGGGAACAATCGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25334 CTATAGTCCACGGGGTCGCAAGAGTCAGATACATCTCAGCGACTAAACCGCTTGCGCTTA Gene BVT0102_207912 - 1 EMBV3_23271 GK000008.2:107174443-107410242 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12209 TCTCCAAGGATTATAAGATGAAGATTGTATATTTTGCCCAGTAACTAAAATGGCACGTTA Gene GeneID:511602|COL4A5:XM_002699860:58_cdna Constitutive 2 NULL GeneID:511602 X GENE COL4A5 NULL collagen, type IV, alpha 5 EMBV3_25052 GGGATTTTGTTGTCTGTTTCAAAAGAAGACTCATTTGTGTTCTTTTGGGGAACCAGTGCC Gene BVT0102_018673 + 0 NULL GK000006.2:30787251-30798827 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204821 TCONS_00204816 TCONS_00204823 TCONS_00204814 TCONS_00204817 TCONS_00204818 TCONS_00204811 TCONS_00204825 TCONS_00204807 TCONS_00204815 TCONS_00204824 TCONS_00204813 TCONS_00204809 TCONS_00204822 TCONS_00204812 TCONS_00204808 TCONS_00204806 TCONS_00204826 TCONS_00204828 TCONS_00204819 TCONS_00204820 TCONS_00204810 TCONS_00204827 1 XLOC_124532 Coding TCONS_00204827 XLOC_124532 Coding Coding BMPR1B 6:30796923-31322331 j TSS153131 5983 1 TCONS_00204827_2 502 0.0145412000668561 14 0.988639283450734 4.14348345015274e-05 0.000101496043601771 0.000789374201902415 2.08954473164154e-07 1.510474205651e-07 1.09402172138552e-05 8.87938226015436e-05 0.000305356986924731 0.00118264077850095 9.8192402201131e-07 4.6266752062643e-12 4.42183260336593e-24 3.8227677573496e-17 1.00128617313018e-23 3.13782856536485e-05 1.22763342728354e-34 3.7533293180748e-63 5.35148534040075e-20 0.000400651709047424 3.96628803115775e-14 7.05725992553876e-05 6.08714873968778e-86 2.41454304450979e-23 3.94362536415942e-18 0.00055059835457821 1.31197031907218e-48 6.96263673013431e-14 9.86943566241624e-14 2.67143018333296e-06 1.93352375871032e-87 XM_005207720.1 BMPR1B PREDICTED: Bos taurus bone morphogenetic protein receptor, type IB (BMPR1B), transcript variant X3, mRNA. 0.0 9449 99.98 0.875981948855089 NM_001203.2 BMPR1B Homo sapiens bone morphogenetic protein receptor, type IB (BMPR1B), 0.0 5047 80.88 0.890690289152599 TCONS_00204827_2 sp|O00238|BMR1B_HUMAN BMR1B_HUMAN Bone morphogenetic protein receptor type-1B; 0.0 1040 98.61 0.99800796812749 4 coding 1 1 1 0 0.0509621078463113 0.85496588290003 -0.0246676308781742 0.663626682592331 TGTGCCTGAGCCCGCCCTCAGAGATTCTGATTGGGTAAGACTGGGATGGAGTCAATAACCTGGCATTTCTGAGCGGCTCTGACGGTATTGCTGGCCCACAGACCACGCTGGAAGGAGGTGTTCTCTCGCTTGGACCTCTCTGAAGGATTTTACGGCACTTGTGGAAAGCAGGGCAGAGACAACAGCCCCTACGCAGACCTGGCTTTTGGCCGAAACAGAACACTTTAATGACCCAGTGAGTGCGCAGCCCGGCGAGTTTCAGCGTGCTCAAGAGCGTGAATGAACCTGAAGTGGATGTACTGTGCATAAATCATCAAGAACGTCCTACACTTTGGTTATCAGCAGCTTGTTTATCTGATTCGTATCTAAAGCAAGTCAGATTTGCCATGATAGTTCATCTCATAGTAACTAAATCATTGATTTTAAGGAAGAAGCCTTAAAATGACTTTGTGTGGCAAGTTATGCACGGGCAGTTCGCCATATGTCTAACCAAGTCACATAGAGGTTCAAACTTCTGCTGCATCACAACCATTTTCCGTTGAGCTATGACAAGAGAGGATACAAAAAGTTAAACAAGCGAGCCTGTCATACATAGAAGCAAACTTCCTTGATAACATGCTTTTGCGAAGTTCAGGAAAATTAAGTGTGGGCACCAAGAAAGAGGATGGTGAGAGTACAGCCCCCACCCCTCGTCCAAAGATCTTGCGATGCAAATGCCACCACCATTGTCCAGAAGACTCGGTCAACAATATTTGCAGCACAGATGGATATTGTTTCACGATGATAGAAGAAGATGACTCTGGGATGCCCGTGGTCACTTCTGGATGTCTAGGACTAGAAGGCTCAGATTTTCAGTGTCGGGACACTCCCATTCCTCATCAGAGACGATCCATTGAATGCTGCACAGAACGGAATGAATGTAATAAAGATCTACATCCCACACTTCCTCCGCTGAAAAACAGAGATTTTGTTGACGGACCTATACACCACAAAGCTTTACTTATATCTGTGACTGTGTGTAGTTTGCTCTTGGTCCTCATCATTTTATTCTGTTACTTCAGGTATAAAAGACAAGAAGCCAGACCTCGCTACAGCATTGGGTTAGAACAGGATGAAACTTACATTCCTCCTGGAGAATCCCTGAGAGACTTAATTGAGCAGTCGCAGAGCTCAGGGAGCGGATCAGGCCTCCCTCTGCTGGTCCAGAGGACGATAGCAAAGCAAATTCAGATGGTGAAACAGATTGGAAAAGGTCGCTATGGGGAAGTTTGGATGGGAAAGTGGCGTGGCGAAAAGGTAGCTGTGAAAGTGTTCTTCACTACAGAGGAGGCCAGCTGGTTCCGAGAGACAGAAATATATCAGACGGTGTTGATGAGGCATGAAAACATCTTGGGCTTCATTGCTGCAGATATCAAAGGGACGGGGTCCTGGACACAACTGTACCTAATCACAGATTATCATGAAAACGGTTCCCTCTATGATTACCTGAAGTCCACCACCCTAGATACTAAGTCGATGTTGAAGTTAGCCTATTCCTCAGTCAGTGGCCTGTGTCACTTACACACTGAAATCTTTAGTACTCAAGGCAAACCAGCAATTGCCCATCGAGATCTGAAAAGTAAGAACATCCTCGTGAAGAAAAATGGAACTTGCTGTATAGCTGACCTGGGCTTGGCTGTTAAGTTTATTAGTGACACGAATGAAGTTGACATACCACCCAACACTCGAGTTGGTACCAAGCGCTACATGCCTCCAGAAGTGCTGGATGAGAGCTTGAACAGAAACCACTTTCAGTCTTACATCATGGCCGACATGTACAGCTTTGGACTCATCCTTTGGGAGGTCGCTAGGAGATGTGTATCAGGAGGTATAGTGGAAGAATATCAGCTCCCCTATCATGACCTGGTGCCCAGTGACCCCTCTTATGAGGACATGAGAGAGATCGTGTGTATCAAGAAGCTGCGGCCCTCCTTCCCCAACCGGTGGAGCAGCGACGAGTGTCTCAGGCAGATGGGGAAACTCATGACGGAATGCTGGGCTCACAATCCTGCCTCAAGACTGACAGCCCTACGGGTTAAGAAGACACTGGCCAAAATGTCAGAGTCCCAGGACATTAAGCTCTGAGGCAGGAGTAAGTGTCTCTGGACAAAGCCAGCAGATATTCTTCTGTTTGTGGGCAGAGCAAAAGATGTTCCAGAAGCATCCACAGTACCAGCCTCGCACATCCTCCTGCTCCCCAGAGGGTGTATTCTTACCTCTCAGGGAGCAGCCTGGACAAACAGAAGTTTCCAGAAGCACGGATTCCTCGTGTCTGTCTGTAGGAGGGAGAAACTGCCTGGGTAATTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAAGCCCAGTATTTTGGGATTGCCTTTTTTTTTCCTCAAAAGATAATTTTGCCAAAATAAAACAAAAATGTAAATGTTTCAAGGTATATACTATTTTAGTTTAAAGAATAACAACTAAAGTTCTTCCCAGAAACTCTGCTGGAAGGTAAATTAAAATATGTGTTTCCATTGGTAAAATGTTGTTGCACTCTACCAACCAAAAGACAATCGTTGAAGCCAGAGAACCGAATGGAACTCATCTTAAAAGCCCCGACGTGCCCCTGCCTCCTCAGACCACTCTGGCCAGCCCTGCACTGGGGCAGCCGCAGCAATGTGAACGCACCTGGGTGCCAGCACCGCCTGTGTGGGACCACCTCTGGGGATTCCCACCCGTGACCTCCTGCAGCTTCAGAGGATGTGGGACAAATGAAGGTTTTGCGTGACTCTACTAGAAGTAAATGTTAACACTGTTCTTCAGAACCACTTTGTATTTCTGATTCTGTTAGGGTTTTTCTTTCATTAAACACAAAGCTTTTGTGTGTAGGACGTTGAACCCCTGCATGCTTTTGATCTCTCAAATGAAAGGATCAATATTAAGTGGCTGTCAGTTGTGTCGAAGACAAGGCGCTTTAAAATAGAGATACTTTGCTCTTGTGCTCTAAGAAGATGGTGTCAGAAAGGTAGGCGGTGAGGATGGAGGTGCACGTGGCTTATGTCTTAGGTGTGCAGAAGAGACCTCCTCGGGCGCAGGGGGAAAGGTGTGCATGACTTACTGTGTACGAAGAGGGTTTCTTTGAGTTATTATCTGCCTTTTCTCTGTCTGAGTTTAGAGGACAGGAAACTTACATCAGGTTAATTGAACTAATTTTAATTAGATAAATATAACCTCCAAATGGAACAGCAGAGGAATGCTAGTGGAGACCACAAGATATTATGGCTGTCGTGACTGAGTCTAGAATAGATACAGATGGAGGATGTAAGTCTTAGGTGATAGCATCACAGGAGTGCTGACTCAGTTTATTTTTATTTTCATGATGTTCAACTCACTTTTTAATTTATTATTGTTTTCTTCTCCGTGGCACTTGTGCAGAACATCTCTCCAGCTATTCAGTTATGTAGGCATAAAAACTTTGGAGCAGCAGGAGTCAAATCATTGACAGGGCTAGTATTCCTTAACAACAGGAGCATAATAAAGGGTACAATTGTACACATCCCTCTGAACCTTATTCATTTGCTTCCCGACTGTGGTTTTTTTTTTGCTTCTTAGAATTCTGTTGTGTTTAGCAAAGAATTGGGAAGCCCCTCCTCTTTGCCCTTAAACACCCCAGGCCCCCCCCCCCACCCCCGCCCGCCAAAACAGCAATTCTATTCTTCCCAGAATACTCCAGGGGGCAGTGTTTTATAACGCATTTTCATTTCCCCACTTGGTGGCTGAAGGATGGAGAGTTTTTGGAAATGTGACAGCTGCATGAAAAATGAGAAAATATTTTCCTGACTTCTGAAGTGAGCTTGCAGCTGGTGACTGGTTCCTCCAGAAAACCTCCGAAGGCAGAGACTGACTGTGAGCTGTGCTTACCGTCTGGGGGAAGCAGTGTTCTGTATTCAGCATTCACTCCCCAATGCTTCATAACCACAGCTCCTTTGTAACAATATTTGCTTAATCCTTGAATATGAAAAAAAAAAGTTTCTGCTTTTTCAAAGATTAAAAACAGTTGGTTCCAAATATGATTAGAATGCTGCTTTTACTGATATTAAGATAACCTGAATAATAGTGTAAATGTTCCCTTTTCTTAGGTCAAATATTCTTTGTGATTGCTTAGAAGGGAGTATGTGGCTAAAGCTAAGTGTAATAATCATCTGAGCCTAGGAGAGAAACTTCAGTGCCTCTAATCAGACCATCTGCAAAACAAATAAGTACACATTTATGTCAGTTAAGTGGGGGCATGTTTGTGTTTCTTGATTTTCCCTAAATTTAGGTGATGTTTGGGCTTAGTGCTTAGGTAACAATGTGGTTTTGTTTTTCATAAGTTCTTATACATGGATAACTTCAAATCAGAATATACTGTGGAGAGGTGATGATTTGAAGGTAAGCTAGATTTCTAGGGATGTGTTGGTTCCTGTGAAAAATGGAAAGAAATTAAGATAGTGTCCAAATTTCTTTCATATAATTTGTTTGGTTGCTTTAGAAAAATGGATAGCTTACTCTCTAATTCCCAACCTGGTATACTCACTGTGGACATTTAAAAATTATTCCTGGTATACTTAAAAAGACATGTTAATTACTATTGTGTTTTAATGATATAAGAATTTATTTATGAATAGATTTTTTTTCCTGTCTTACCAAAATCCACCTCACTTAGGAAATATTAAATTGTTCTTAAAGAGACTACCTACTCACTTCCAAATAATTAATTTTGATTTTTACATTTCTGGTAGCTCAGAAGTGAATTTTATTTTTTTGTTTTGTCTCTCAATAGAATAGTGGGGACCTGGAAATACTGTAGATGATTGCTTACTTTCAGGACGATTTCAAAGACTAAAATTTTCTTCTAACCTTTTCCCTGCAAAGGAATCCTAAAATATTACTTGTTAGCTAATATAAGTTTTGTATGCTAAGATATTTGGGTTTATAGTTTATGTATGTGTGTGTATATTATATAAATATATGTATATATAAATACTATGTTCAGTTTGGAGTCTGGCACAACTCCATTATGTGGATTAGAGAGTAAAATATTATGGATGATAAAGTACTAAGTGAAACATAATATTTATTTATATAAAAGGGTGTAGATTGTTGCATCACAGGCAGCAGTGTTGTATGAACATTGTGTGTGAGGAGACAGGTCTCTGACCTCCTGAAACGCGCTGCTTGAAAGACACTAGTGACCATTCTTTTTATTCTCAAAACAAAACTTCTTATAAAATACACTAAGATTTTATTTACAGGGAATTCTTCGACACGTTTCAATTGCTGCGTAAGCAGGTAGAGCGAGGACTGAATACTGATCGACTCTCATGTTTCTAGAGTCATGCATATTCGTTAGAAGTGACAGTGTTTTGTGTTGTTGGTCTGTTCTTTGTTGGTAGGTGGAAAGGCACTGAAAGAAGTACAGTTTTTTAAACTTGAAAAATTCTATAGTTATAGCTCCTTAGAAAACTTAGTCACATAGCCGTGGAAAGGAAGGAAGGCATCAGAAGTGACTTAATTTAGCACTTATGATTCCTTTTGTAAAACAAAACAAAAATGCCATATTTTTTGGAGAAAAGTTAGACTATATAAGGGATTTTGTTGTCTGTTTCAAAAGAAGACTCATTTGTGTTCTTTTGGGGAACCAGTGCCTTACTGAATTTGTATATACTGTAATTATTCAGAACTAGGGAACAAACAATTGTATTTGTTACAAATTGTATATGGCTTTGTTTTAACATTCCCCCTAATAAAATGGTTTCATTCTCCCCTTGGAAAGAACACTCTGTTGTCCTATAGTTGTGCCTGTTCTCTGTAAAAATGTCACGTTGTAACGGGCAGGAGAGGTGGCCGTGGACAGCGACGCGGGTGAGTGTGTGCCGTGGCGGCAGGAGAGCAGGACGAGAGGTCTGATGGCTCCGATTCTGTCTGTTATT EMBV3_12110 AGCCACCATCAGGAAAGTACAGGAGACACAACACCATGAAAAGGAAGCACAGCGCCAAGC Gene GeneID:512894|RIBC1:NM_001075585:29_cdna Constitutive 0 NULL GeneID:512894 X GENE RIBC1 MGC143021 RIB43A domain with coiled-coils 1 EMBV3_16001 GGGGGAGCAGTCCAGAGCCTGGGGAAGGGGACCTGGTGCAGGAGGTGACTGGAGCCACAG Gene BVT0102_100325 + 0 NULL GK000030.2:101428601-101508727 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245323 TCONS_00245324 1 XLOC_150688 Coding TCONS_00245324 XLOC_150688 Coding Coding FAM123B X:101508517-101537034 o TSS184173 7551 1 TCONS_00245324_12 1119 3 0.735306494599523 0.000651869972241955 4.70911527988421e-10 0.000211405488851494 0.000615849440839597 0.000395466823671836 0.000285255378005577 0.000523868769389208 0.000118368696652408 0.000375785346853194 9.68610333983395e-07 1.04159739475461e-12 0 6.07637245528469e-06 3.20814332216184e-05 0.000108276505140769 0.00187238551697481 0.000105837225819468 0.000588127160731778 1.85700460758287e-05 0.000135414266498766 0.000518373267205778 0.000118600088134854 0.000341657949238944 0.000703786698571726 0.000210618832662215 2.6696207362234e-10 3.70543494818607e-05 2.16166144207091e-05 3.59987995261203e-05 1.13169575060658e-05 XM_584347.3 FAM123B PREDICTED: Bos taurus family with sequence similarity 123B (FAM123B), transcript variant X3, mRNA. 0.0 6917 100.00 0.507747318235995 NM_152424.3 AMER1 Homo sapiens APC membrane recruitment protein 1 (AMER1), mRNA. 0.0 4652 85.69 0.523241954707986 TCONS_00245324_12 sp|Q5JTC6|AMER1_HUMAN AMER1_HUMAN APC membrane recruitment protein 1; 0.0 1660 82.59 0.999106344950849 0 coding 1 1 1 1 0.111191632743623 0.613961792649918 0.00517372174307434 0.92473573243419 GGGGTATGGGGGAGCAGTCCAGAGCCTGGGGAAGGGGACCTGGTGCAGGAGGTGACTGGAGCCACAGCGGCGGCAGGGGCGGCGGTGGCGACGCTCTCAGCCGTAGCAGCCAAGGCTCCAGCTCCGGCCAGTGCGGCGCAAGAGACAAAAACCCGGCTGGAAATCGGACAGGGCCGGCCCCAGCTGTGATGCTTCCTGACTGATGATGTTATAACAGTGCCGAGAAGCCAAAAGGCTGCATTTTTTAGCTGAATACACCTGAGTTTTCCCCACCATCATGGAGACCCGAAAGGATGAAGCTGCTCAGGCCAAGGGAACAACAGTCTCTATGGATACCCAGGATCAAGGGACAGAGAAAGGGGCCAAAAACAAGGCATCTGAGACAACAGAAAGGCCCACATCAGAGCCACCCTCATCTGGTCCAGGTAGGCTGAAGAAAACTGCCATGAAACTCTTTGGTGGCAAGAAGGGCATCTGTACCCTGCCTAGTTTCTTTGGAGGGGGACGAAGCAAAGGTTCTGGGAAAGGCAGTTCTAAGAAGGGTCTTAGCAAGAGCAAGACCCACGATGGCCTGAGTGAAGCAGTCCATGACCCTGAAGACATTGTCAGTGAAGGAACTGGCCTCTCCTTACCTTTGCCTGAGTCATCATGCCAACTTCCCAGCTCTCAGAGTGTCCATGGGTCTTTGGAGACAGACTCCAGATGCAAGAGGTCTGTGGCTGGAGCCACAGAGAAAGCTGGGGCTGAGAAGGCTCACTTTGTGCCCAAGCCAAAAAAAGGCCTGAAAGGTTTTTTCAGTAGTATCCGGCGTCACCGGAAGAGCAAGGTCTCTGGGGCTGAGCAAAGCAATCCAGGAGCCAAGGAGTCTGAGGGGGCCAGAGCAAGGCCTCATGAGTATGTGAGCTCAGCCCTTCTGTCCCACGCTGATGAGGTCCTCCAAGCCCCAAGAAAGGAAAATGCCAAATTTCAAGATGTCCCTGGGCCGAACATTCCTTCAATATCAGAGACTTCTCTGGCAGCCACTGAGAAAGCAGCCTTTAAAGATGCAGAAAAAACCTTGGAGGCCTTTGTCTCAGCATTCTTGCAGCCCAAACCTGCCCCTGAAGCCAGTGGCCCAGAGGAGTTCCATAGTCCAGAAACAGGGGAGAAGCTTGTGGCAGGAGAGGTAAATCCACCCAATGGCCCTTTAGGGGACCAGCTGAGCCTCCTCTTTGGGGATGTCACATCTCTGAAGAGTTTTGACTCACTGACAGGTTGTGGTGACATAATAGCAGAACAGGATATGGATAGTATGACAGATAGCATGGCCTCTGGAGGCCAGAGGGCCAACCGAGATGGAACCAAACGAAGTTCCTGCTTGGTGACCTACCAAGGAGGGGGCGAAGAGATGGCCTTGCCTGATGATGATGATGAGGAAGAAGAGGAAGAGGAGGTGGAATTAGAAGAGGGAGAAGAAGTCAAGGAGGAAGAAGATGATGATTTAGAGTATCTGTGGGCAAGTTCCCAGATGTACCCAAGGCCCATACTAAATCCAGGCTACCATCCCACAACATCCCCAGGCCATCTTGGCTACATGCTTCTTGACCCAGTTAGGTCTTATCCTGGCTCAGCCCCTGGGGAACTTTTGACTCCTCAGAGTGATCAGCAAGAGTCCGCCCCCAATAGTGATGAGGGTTATTATGACTCCACTACACCAGGACTTGAGGATGATTCAGGTGAGGCCCTGGGGCTTGTCCATAGGGATTGCTTGCCCCGAGACAGCTATAGTGGTGATGCCCTCTATGAGTTCTATGAGCCAGATGATAGTCTTGAGAACTCCCCACCTGGGGATGACTGCCTTTATGACCTCCATTGTCACAGCTCTGAGATGTTTGACCCCTTCTTGAACTTTGAGCCCTTTTCTTCCCCTCGGCCACCTGGGGCAATGGAGACAGAGGAAGAACGGCTAGTAGCCATCCAGAAACAGTTGCTATATTGGGAGCTTCAGCGGGAGCAGCGAGAGGCCCGGGAAGCATGTGCCCAAGAGGCTCACACCAGAGAGGCCCATGCTCGAGAGGCCCACACCCGAGAAGCTTATGTCAGAGAGGCCCGACCTCGAGAGGCCTACGCCAGGGAGGCCTGTGGCCAAGAGGTCTGTGGTCGAGAGCTTCAAGTCCGAGAGGCCCAGGTGCGGCAGGAGAAGCCCGTCATAGAGTATCAAATGAGGCCTTTAGGCCCATCAGTGATGGGTCTGGTGGAAGGGGCATCAGGGGCCTCTCAGACTTCCCACAGAGGAACCACATCAGCTTTCCCTGCCACTGCAAGCAGCGAGCCAGACTGGAGGGACTTCCGTCCTTTGGAGAAGCGTTTTGAGGGAACCTGCTCCAAGAAAGATCAAAGTACTTGCCTGATGCAACTCTTCCAGAGTGATGCTATGTTTGAGCCAGACATGCAAGAAGCAAATTTTGGAGGATCTCCCAGGAGGGCCTACCCTACTTATTCACCCCCTGAGGAGCCAGAGGAAGAGGATGTTGAGAAGGAAGGGAATGCTACAGTGAGTTTCTCTCAGGCCCTCGTGGAGTTCACCAGCAATGGGAACCTCTTCTCCAGCATGTCCTGCAGCTCTGACTCTGATTCGTCCTTTACTCAAAACCTTCCTGAGCTGCCTCCCATGGTGACCTTTGATATTGCTGATGTGGAACGGGATGGGGAAGGCAAGTGTGAAGAAAACCCTGAGTTCCACAATGATGAAGACCTTGCAGCCTCCTTGGAAGCTTTTGAACTGGGCTACTATCAGAAACATGCCTTCAACAACTACCGCAGCCGATTCTACCAAGGCCTACCCTGGGGTGTGAGCAGTCTCCCTCGATACTTGGGACTACCTGGCATGCACCCTCGTCCTCCACCTGCTGCCATGGCCCTCAGCAGGAGGAGCCGCTCCCTTGACACTGCTGAGACCCTGGAGCTGGAGCTCTCCAATTCTCACCTGACCCAAGGCTATATGGAGTCTGATGAGCTTCAGGCCCAGCAAGAAGATTCAGAAGAAGAAGAGGAGGAGGAAGAATGGGGCCGAGACAGTCCCCTATCTCTCTATACTGAACCTCCAGTAACCTATGACTGGCCTGCCTGGGCTCCCTGTCCTCTCCCAGTGGGGCCTGGCCATGCCTGGATAAGTCCTAGCCAGTTGGATGGGCCTTCTAGCCATCCATTTGGGCAGGCAGTCTGTTGCATATCTCCTTTCACCATGTCAATGTTGCTCTCAGTATCAGGGCCAGAGCCAAGAGCACCTGGGGAATCCAAGTCTCAGCTAGCTCGGCCTTCGCACCTACCCTTGCCCATGGGCCCTTGTTATAACCTCCAGCCAAAGGCCTCCCAGAGTGTGAGGGCCAGGCCTCAAGATGTGCTGCTGCCTGTTGATGAGCCCAGTTGTTCCTCCATTTCTGGAGGCTTCAGCCCTAGCCCTGTGCCCCAGGCCAAGCCTGTGGGCATTACTCATGGCATCCCTCAGCTGCCCAGGATCCGGCCTGAGCCCCCAGAGCCTCAGCCCATTCACTATGGGGCTTCCCGCCTTGACCTGTCAAAGGAGAAGGCTGAGCAAGGTGCCTCTCTCCCCACCAGCTGCTCCTCCACTGCTATGAATGGAAAACTAGCTGAGTAGTCATCATCAATTCTGGAGTGAGGGGCATGGGGCCTGAGCATGTGAATGGGGATCAGGGTTGGGCAGAGGGGTGGGGGTGGCGGTTACTGTTTAACTTGAAAATCCTTTTGGCCAAGGAAAGCTCCTATGAGTTTTCACCTTTGTTTTCCCACTTCCCTTCTGTGGCCACATTCAGCTCAAGTACATCTGCCCTGGGAGATTGCTGCTTCTGTGCTCCAATTTTTGTTTTTGGGTTTTTACCTTGTGACCCATGCAGGGTTAGAAATGCTCTAATTTTGTGCCTATTCCAATTGCCAAGGTAGTGATTTTATATATGTATAAAATCTCTGCCATTTTTCCATCCAGTAGATGAGCAGCCAAGTCTACACTGCCTCCCACTTGGGGACAAGGAGCTTGTTTGCTATTAGCAGTGTAAAATTATGGTACAAATCCTACCCACTCCCACTTCCTTTGGTCTTGGCATAGCTGCCACCATCACATCAGATAGTATAATCTAGTAGCCCCAGCTAGCTGTCCTCAGAGAGGATCAAGTAGCATGTGTCACACTGCCTGTTGCTATGGACTTAGGTATCATAACCAGCGAGGGTCTTTTAACCTGGCCTGCTATAGCTTGGGTTGAAGACAAAAATGCTAATTTCCTTAATGTAATGACCAAATTCATCTAGTTGCAAACAAGACAGGGTTATATTGTAGACACTACCATAGGTCTTGAGCTCCAGAATGATAGGATGTTTTTTCCTTCTTCGTTTCTTTAAGCTTGTGACAGCCTGAATTGCAGATGCTTTTGAATTTTGGTTCTTTTTTTTTCTCCAAAGGAAATTTTCGTTATCTCATTACAAGGAACACATTCTTTTAATCGAGATACGGGAAGAGAAATGGCCTAAACTAGGCTCAGCTGTAGGGGATAGGATTTTTACAGGTTGCAGGAGAAGGATAGGAAAAGGAATTCATTCATTCTTTTCACAGAAGAGAGGATTTCATACATTGCAGAGCTCATGTCAACTCAGCTTCTTAAAAGGGAAAATTGCTTTCCCCCAAAGACAAAAACTTCCTTAAGCCTTGCCCACCCTTTCACTGGATGCTTTAAAAAGGCTTCATGCTAGCATTCCCAAGAGACAGGACACCAAGGGTATTTAGGTTACTGTTCCAGTTTTTCTAAAGAGCCTTCATTTTCCAATTAGCCAAGTTCTTAGTATCATCATAGGACTGGGTGTCTTGAGAGGAAAGACTGATCTGCCCTCAGTCTGCCAAGCTGAAGGACTCCGATTTGTGTGGTAATTGCAGCTCCTTATGGAAAGAATGGCACCCTTATTTCTGCATTCACACAGTTTTCATGTTAAACTAGCTTGGAAATATTGGTGAGGAAGAGTTGCTGTCAGGAAGACATTGCAACAGGCTAATCTTACCAGGCTCTATCTCTCATTAATCACCAATACGGAGGGGTCCTTTTAAATTTCACCATTGGAAATGGTATATGAAACTTTTTACCTAGGCATGTTGACCCAAATTATGATCCTTGCTCCCTTGATCCTGTCCCCATCCTCCACCCATCTCCATGCCTATTAAGAGGCAAACAGGGCTCTTGGTATTCCAGAAGAGATGCTGTTGCCTGCCACCTGAAGTTGAGATGACTTTGTGGGAAAACTGCCCCTTGGCCATGGGATGTGTGTGCTGGTCTTTGTCACCATTTTTCGGATTGGTGTTGGCCCAGTGCCCATCCCCACAAAAAGTACACCTGGATGGTAGAAGGTGTACCCCTGGAAGCACCACATGAATTTGCATGGCACTGACACCAGCACTCAAGGGATGACTTTGTCTGCATTGTGAAGAAATCTGTCAGTCATGAAGCTGGAGAATCAAAGAAGGGCAGCACAAGCTCCTGTTTGTATGTAGACTGTGCCAACCACAGCAGGTAGTAGAACCATCACCAACCACCAGAGCCTGCTGGATCACCAACCTGTCTGAGAAGAGAAAAAGTAGGTGGTCAGCTTTTGGCCAAGGGCTGAGAGCTACAGTCTCTAACAAGAGGGCAGCAAGAGGTACCACCTCTGAAGAGGGCAGTCATAGCCCTGACACACATTGCTGGGCTTTGGAAGGTCTCATATCACAGTAAGTTTTAGGACTGAGCATCAGCTCATGCTTTGAACACTGCTGCCTGCAAGTCCTTTCACTGTCCTGGCCAGCCCAGAGATAGGATCCTCACCATCAGAAATAAGGCAGTCAGGGTGCATGGCTGCAGAAGCAGCCTCCTTTGAGTCTACTCTAGATCCAAGCAGTTCATTTCTGAATCCCAGCTGTGGCCTAGAAGAGGAAGGAGGACCAGCTGGAGACTTGTGTGGCAGCACAGGGTGACACTGGGAGAGCCAGCCAAGCTCTAGGCCTCTCCCCAAACATACACCAGTGTTTGCTTGGCTAACACCAAATATGTCCCAGACTACTAAATGTGTAGATGTTAAGTCCACAAATGAACACCATTTCAGCATTGCAAGGTCAATGTTTTTGGATGTGACTTCACAGGAAGGTACGACTTGAGAGAAGGTGACTGCTCTTAGCTATCCAGCAAGCAGGCTTATATATAGTGTCAGATAGCTCTGATCCTGAGAATTTCCAAATGAGACTGATCCTTAGGGGACCAATGACTGTGGATAGAGAAGACCACTTAGAATGTCTCTCCCAGGGCTGTCAGTTTCTCTGTTTTAACGTCTTCAAGGAAGCCCTGCCTTGGGGCTCTTTTAAGGCCTGCCCCAATCATCTGGACTCAACTTAGGCACCAGTCCACGAGCCTTCTGGGCCAAAGGCTTTGGTCAACACCAGTCTTTTCTCCCTCAATACTGTACCAAGGAGGGAAGTAGCTTCCCACACCCAAGGTGCATTCCCCTCATCCTGCTGCCAGTGACTTTCCTACCCTTGCCACTGCTACCACCCCACCTGCCCTCGGCCCTCAGGCCCAATTGCTAGAGGGAGACGGGGTTTAGCAGGGAGACTTCAAGTTTACCCATGTGTATGTTGCATCCAAGTTGTTTTTAATATATATATATATATATATATATATATATATATATCTCAAAAGTCAATTATCTATTTTTGTATTGTTTGCATTTTATATTCATGGAAAACAATGTATCAATTGTTCTTTTCTGATATATTTTATTTTTAAGCGGTGCTGTTTACAGTTTTAGACAAAACGAAGATGACACAAAAATTGCTGCTGCTTGTGCAGAGGGCTGGTATCTCAATTGCCCAGGACCCTCGCTCTTTCCCCTCTCCCCATCACTGATGTATCGCACTGTCCATCCCCTCCCTCCATGATAGGGACAGCATAAGATGCCCAGGTATTAAGACAAATGCCAGGTGACTCAGGCATGTGGAACCTGATAGATAGCATGTCTTTTTATGGTTTTATTTTTTTCTTTCAGACTCACCTTTCCCTGTGTGTAGATCTTCTAGAAGTACTCATGTCTGTGTCTCTCTCCTCTTTATGTTTTCCGCTCTAGTTTTGAAACCAGAATGCCCATGTTTTGCTATTTGTCATGTTGGGTTTCTCCAAAGAACATTTTGGGGGTATTCTCCACCCAGTAAGGAGGGCAGGAGATTTCTCAACTATTCCCCCTTTCCCCAAGAAGCTGGGGGAGACAAATGAAAGTGATGCTTGAACCATCAGGAATTAGCCATCTCATTGAGGAAACCCTTACATGGGACTTTCCAGGAGCTCAGTTGATTGTGACATTCACCCAGAAGAGACGTTGGGGAATTCCTTGATCCCTCTTGCTGCTTTCGGGGAATCTCTTCCTCTACCACCATTCCCACTCCCCTGCTGTGCTCCAGCTCACACATGGATGGAACTTTGGGGGAACAGTGACTATTAGGGTGATGGCTTGCTGGCCTGATTCCCTACTTTTCCATTATATAGTCAC TCONS_00245326 s 5' 0 TCONS_00245325 s 5' 210 EMBV3_25103 GCACAGCCTCTTGATAACAGCATGGGGGACTCAGACTGCCTGCACAAACACGCCAACAAT Gene GeneID:100299449|LOC100299449:XM_002690196:47_cdna Constitutive 0 NULL GeneID:100299449 9 GENE LOC100299449 NULL similar to cannabinoid receptor 1 (brain) EMBV3_42799 GAATGCAGCTGGTTGCTTCTTTCTGAATCCTGAGCTGGCTACTCTGTAAGTGTTTCAGGG Gene GeneID:523542|CSNK1D:NM_001102080:99_cdna Constitutive 0 NULL GeneID:523542 19 GENE CSNK1D MGC166392 casein kinase 1, delta EMBV3_22948 GTGAACTGTGACTTGCTTGTACATTGCAAGGTTCAGCCTGGATTGTCATTAGGTTGAACA Gene GeneID:509037|TMX1:NM_001075385:40_cdna Constitutive 3 NULL GeneID:509037 10 GENE TMX1 TXNDC1 thioredoxin-related transmembrane protein 1 EMBV3_26252 GTTAATGGCTCCGATCTGAAAGAATTCATAGCCTCATCTCCCCAAGGAGCAGGAGAGACC Gene BVV0102_298825 + 0 NULL GK000013.2:11276249-11315038 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39402 CTTGGATTTGGAACCTATGCACCTCCAGAGCTTTGGTTAACTTCCCTTCGACCAGAGTTG Variant GeneID:538060|LOC538060:XM_002684759:245_cdna 310^477 2 EMBV3_39651 GeneID:538060 1 GENE LOC538060 NULL similar to Aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) EMBV3_13220 TCAAGAGAAGGTGGTCGGGACCAAGGCGATCGCAGCCGTCCTTATGCCGTGTGCTTTAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32084 TGACCATGGACTTAGAGTTCAGGATTCAAGAGACGACGTGCAGGAGGGAATCTGAGGCAG Gene GeneID:281500|SPP2:NM_174188:11_cdna Constitutive 0 NULL GeneID:281500 3 GENE SPP2 spp24 secreted phosphoprotein 2, 24kDa EMBV3_41867 TGCCTTCCTCACCAATGAGCTCTTCTTTGATGCACAGATGCTCCAGCAGATGGGGGGTGG Gene GeneID:511617|MGC154956:NM_001080260:637_cdna Constitutive 0 NULL GeneID:511617 4 GENE MGC154956 NULL similar to GTPase, IMAP family member 5 EMBV3_00212 CTGGGAGTCGCAGCGGTGGTTTGGGACGCGGTGCTCATGTGACTATCACGGATCGAAAAG Variant GeneID:615773|FAM119A:NM_001083518:47_cdna 185^296 2 EMBV3_01845 GeneID:615773 2 GENE FAM119A MGC142783 family with sequence similarity 119, member A EMBV3_29409 CCAAGAGCTGCCACACCAATTCCTTCCATACTCCCGAAGAAAGAGATAAAGCCCAGCAGA Gene GeneID:790470|PRP2:NM_001080377:179_cdna Constitutive 0 NULL GeneID:790470 23 GENE PRP2 PRCII prolactin-related protein 2 EMBV3_40713 CAGGAGGGGATGGTACAGTGTTACTAGAATCCTTCCTCACTGTTTTTGGACGCACCCAGA Gene GeneID:514626|MXD1:XM_002691442:134_cdna Constitutive 0 NULL GeneID:514626 11 GENE MXD1 NULL MAX dimerization protein 1 EMBV3_10755 AAGGCCGACATCTACTCCTTCGCCATCACCCTCTACGCCGTGGTGGCCTACCACCTCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42159 CCTGATCACGCCCATCCAACCCCTTCTATCCCAGAACCAAAGTCAACAGCAGCTCTCTGC Gene GeneID:100337270|LOC100337270:XM_002698035:250_cdna Constitutive 0 NULL GeneID:100337270 25 GENE LOC100337270 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 6-like EMBV3_34742 AGCTGTGGATTCTGGCAAATGGTCCTTGTGCCCTTCCCCAATTCTTACCTAATCTGACCC Gene GeneID:444990|EIF5A:NM_001003658:39_cdna Constitutive 1 NULL GeneID:444990 19 GENE EIF5A MGC128860 eukaryotic translation initiation factor 5A EMBV3_22140 CGAGAGTCCCAAAATGCCGGGCAAAGAGGTTGAACTAGAAAATGACCTACAGCCATTACG Gene GeneID:505066|TBCE:NM_001038032:72_cdna Constitutive 1 NULL GeneID:505066 28 GENE TBCE MGC133938 tubulin folding cofactor E EMBV3_35830 ATTTTGTAAGAGTTATTTATCAAAATTATGTGAGGTTCCAAAATATGTAAAAACAATAAT Gene GeneID:100296970|LOC100296970:XM_002696737:66_cdna Constitutive 2 NULL GeneID:100296970 21 GENE LOC100296970 NULL similar to pinin EMBV3_33949 GAAGTTGCTAGCAGAGCCTCAGGAACTGCGGGTCAGCAGCCTGAGTGCTGTGTGGATGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16873 GAAAAGGTCACAGTGAGGCTTCCTGTAGGGAGCAGAGGAGCTGGAACTGGCACTGGCTTA Gene GeneID:531211|FBXL14:NM_001075947:37_cdna Constitutive 0 NULL GeneID:531211 5 GENE FBXL14 NULL F-box and leucine-rich repeat protein 14 EMBV3_36541 CGCCCTACTACGTGGGCATCGGCAATGGAACCCAGATTTACGTCATTGATCCAGAACCAT Gene GeneID:281732|CTLA4:NM_174297:58_cdna Constitutive 1 NULL GeneID:281732 2 GENE CTLA4 CD152 cytotoxic T-lymphocyte-associated protein 4 EMBV3_36868 CAGGTCCCCTGCTGAGGAGCAATAGTGGGATGAAGCTTTCCTGTTCCCAGAACTATAAGC Gene BVV0102_312800 + 1 EMBV3_38433 GK000008.2:7020889-7090574 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23922 GTTTGGTGGTCTGGAAGCAATGAATAGCATGGGAGGATTTGGAGGAGTTGGTCGAATGGG Gene GeneID:524920|MYEF2:NM_001102085:74_cdna Constitutive 0 NULL GeneID:524920 10 GENE MYEF2 MGC166189 myelin expression factor 2 EMBV3_02276 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34145 TTTTTACAGTATTCTTTCTACATGATCCTTTTTTGTACATTTAAGAATATTTTGATTACA Gene GeneID:505687|PLS3:NM_001045923:126_cdna Constitutive 2 NULL GeneID:505687 X GENE PLS3 MGC128570 plastin 3 (T isoform) EMBV3_06087 GCCGAGGAGACATGAGAAGAGTGAGGTCCTGTATAGAAGAGATTTGACCCAGTGCTGTTG Gene GeneID:514758|TMEM17:NM_001083433:80_cdna Constitutive 0 NULL GeneID:514758 11 GENE TMEM17 MGC139794 transmembrane protein 17 EMBV3_20500 CAGGGATCCTGAAAGCTGCAGATGGCACAGAGACCTCTTACAAGTGACCTGGCTTGATCA Gene GeneID:539655|CDK17:XM_002687522:474_cdna Constitutive 0 NULL GeneID:539655 5 GENE CDK17 PCTK2 cyclin-dependent kinase 17 EMBV3_37660 TTCAAATGAAACAGCTTTGGGACTTCCCTGGTGATCCAGTGGCTACGACTCCATGCTTCC Gene BVV0102_458082 + 1 EMBV3_18933 GK000018.2:35146424-35159792 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10250 GGTCCTGCAAATGAGGACCAGTTGTAACTTTTCCAAAGGAAGGTTTACATGATTTGTATC Gene GeneID:507386|ARFIP1:NM_001083650:11_cdna Constitutive 4 NULL GeneID:507386 17 GENE ARFIP1 MGC151527 ADP-ribosylation factor interacting protein 1 EMBV3_13893 GCCGTCTACCCTCCCCGCCCCCAGTAACTGCAGTCTACAGAGTCAATATATTTTTTCAGA Gene GeneID:531505|MYL12A:NM_001015640:140_cdna Constitutive 3 NULL GeneID:531505 24 GENE MYL12A MGC139901 MRCL3 MRLC2 MYL9 myosin, light chain 12A, regulatory, non-sarcomeric EMBV3_24778 AGGATTTGCCTCCTCCGTGCTCCCTTCTAAGGACGTGAAATGTAGACAAGTGCTCCGGTT Gene GeneID:535407|ACP2:NM_001076058:81_cdna Constitutive 0 NULL GeneID:535407 15 GENE ACP2 MGC142461 acid phosphatase 2, lysosomal EMBV3_12552 GCTTCAGAATCCAGTGCCTTACCAGAGGCCAGCTCAGAGACTCCCAAAGAAAGCTCAAAT Gene GeneID:519552|CHM:XM_002699945:26_cdna Constitutive 0 NULL GeneID:519552 X GENE CHM NULL choroideremia (Rab escort protein 1) EMBV3_09565 CTTCTACTGGTCCTGGGCTCCATGTTGGCGAACTGGTGGCTGGATGGAAGGACCAGCTTT Gene BVV0102_039768 + 0 NULL GK000011.2:104187142-104231516 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034241 1 XLOC_020474 Coding TCONS_00034241 XLOC_020474 Coding Coding - 11:103217803-103220202 - TSS25240 2399 2 TCONS_00034241_4 99 0.598582742809504 1 0 0.000212677590417829 5.02631626285556e-05 9.25785352263468e-05 0.000200190030114823 4.7334312827872e-05 1.78927675902246e-05 0.000247951364231717 0.000113412617267526 3.61782076499477e-06 0 0 0 1.07642827679938e-05 0.000207846783286479 2.04510017535524e-06 0.00197068478410138 6.92051384889842e-06 5.22945082704877e-05 4.1847840596253e-05 5.69558146983793e-05 6.45361227735371e-05 0 0.000208414125120456 0.000412300953380653 0.000212273000620284 0.000243756820687201 0.000170963147819832 0 1.01179653884863e-05 0 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 3e-138 497 87.05 0.170904543559817 TCONS_00034241_5 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 4e-06 45.1 43.48 0.584415584415584 0 noncoding CCCGTGCGCCCCGTGCCAGCGTCCAACTCCAGGGGCTTCTAGGAGCTGGGGCATCTTGGTCCCCTCTGGGTATGGAGGGAGTGAGGCACGCTGGAACTGGGAGGGGCTGTCCCAGAGAAGGGATGGGGCAGTCATCTCCTCCCCCTGGCCATGAGGGGGCCAAGGTCACGTTGGAAAAGCTCACGATCCTCTCTGCTTCGGCCTGCAGTGCACACTGAGCACGTGGGCGCCTTCCCAGCCGCTGAGTCCAGGCCATCATCTCCTTAGCTGATCCCAGATCCTGGAGTGGGAGCTTCTACTGGTCCTGGGCTCCATGTTGGGGAACTGGTGGCTGGATGGAAGGACCAGCTTTGCCATTGTCAGATCTGACGGATGGATGCTCTGTAGTGCCCAAGGGCATAGGCACCAGGGACCCAAGCCTGGAGGGTGTGAGGGAAGCACCCAGAGGCAGAGTCTGGTGGTGGTGGGTAGGGCCCTTTGCAAACTTCAGCAAGTCCTCTTGTTTCCAGATCACAGACAACACCTGAGGCTGTGGTCTGTGAGAGGCCAGGTCAGCCCGTCCATGGCAGCCACCAAAGCCTGGGGGCTGGCAAGGTTCACGGTGAAACTGTAGTCTGGGAGAGACCTGGACTGCCAGTTTGGGGTCAAAAGTGCCTGGTCGCCTGGTCCTCTCCAATCTGTGATTGTTGTCCACCCAGTGACGCATGTCTGGAGAGAGGCCCTGGCTGTTGTCAGGGGCTGGTGAGACGATGCCCTTGATTAGATAGGCAAAGAGAGCAAAATAAACCCAAGGCTAGCAGAACAAAGCAAATAATGAAATTTAGAGCAGGGATAACAGAACAGAGGAGCACTCGAGAAAATCAGTGACACCAGTAGTTCTTTGTTTTAAAGATTTAAAAAATGGACAACATGGGACAGTTGTGTGTCAACAAGTTGCTTAACCTAAATGAAATGGATGAATTCCTAGAAACACACAAGCTAGCAAAGCTGACTCAAGAAGAAATGGAAAGTCTGAGTAGACCTCTTACAAGTAAACAAACTGAAGCAGTAATAAGACCCCAACAGGGAAAAACCCAGCACCTGATGCCTTCATTGGTGTTTTGTCTCAGATACTTAATAGAAAACAGATCCTAAATTATTCAAAAAGTACAAAACAAACACATTTAAACTCATTTTGTGATGACATTAACATAACTCCAAAGATTCTGTAAAGAGAGTAGGACCATAAAGAAAGCTGAGTACTGAGAAACTGATACTTTTGAACTGTAGTGTTGGAGAAGATTCTTGAAAGTACCTTGGACTGCAAGGAAATCCAACCAGTCCATCCTAAAAGAAATCAGTCCTGAATGTTCATTGGAAGGACTGATGCTGAAGCCGAGTCTCCAATACTTTGGCCATCTGATGTGAAGAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGAGTGAAGGTGGGAGGAGAAGGGGACAACAGAGGATGGGATGTTGGATGGCAACATGGACTCGGTGGACATGAGTTTGAGCAAGCTTCAGGAGTTGATGATGGACAGGGAAGCCTGGTGTGCTGCAGTTATGGGGTCGCAAAGAGTCAGACATGACTGAGTGACTAAACTGAACTGAAAGATGCCGTAAGAAAAGACATCTGCAGGCCAAAATCCATTAGAAAGATGTAAAAATGTTCAGCAAAAGGCTAGCAGACAGAACCCAGCAGCATATTGAAGGGACTATATAGTCATCTCCAGTGCTGTCTGTCTCAGGAATGAGCGGGGCTGTTTAGCACAGTTAATGGGTGTCGTACACCACCTCAATAAAAACACGTGGTCATCTCAACTGATGTAGAAAAAGCATTTAAAACTTTGAAGAAACACAAGCCTTTTTTTTTTTTTAATAGCTGCTCTCAATAAAGTAGAAATAGAATAGTATTTCCTTCACATGATTTAGGATATTTGAGAAAAACACATACATCACATTCAGGAGAAAGGCTGAAAGTTCTCTCCCTAAGGATGGGAGTAAGTCGGCGATGTCCACTTTTGCTTTTCATTTCAAAATGGTAATGGAAATCTGATGAGCAATTAGTAAGACATCTATATATAGATATATAGATATATGTCTTGCTTAGATGATATAAAATCTGTTTGCAATGTGGGAGTCCTGGGCTCGATCCCTGAGTCAGGAAGATCCCCTGGATAAGGAATGGCAACCCACGCCAGTATATTTCCTGGAGAATGGCGTAGGCAGAAGACCCTGGCGGGTTACAAGAGATTGGTACCCAGAGAGGTCTGAATGAGGGGATCAAGGGGACACTTAGCCTGACGAGCTCACAAGGATGCTCTCGCACATGTTGCCATTGTCCATGTCCATGGTGGATGATCAGTGTTGCCCACGTGCTGGAGGCAG TCONS_00029266 . 5' 12463 TCONS_00029266 . 5' 12463 EMBV3_19605 CTGTTTCTGATAGTTGTTGCCTCAATTGTAAGAGAAGCCCTTCTATATGAGGTGGGAACC Gene BVT0102_079667 + 0 NULL GK000018.2:57618523-57641708 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33091 TCTGCGGTAGCCTCACCTCAGCGCATTCAGATCGTGACCGACCAGCAGACGGGGCAGAAG Variant GeneID:505531|NR2C2:XM_002697126:52_cdna 73^117 1 EMBV3_12360 GeneID:505531 22 GENE NR2C2 NULL nuclear receptor subfamily 2, group C, member 2 EMBV3_14834 TCTCCACCTGTGCCTCCCACCTGACCACCATTACCATCTTCCATGGGACCATCATTTTCA Gene GeneID:788476|LOC788476:XM_002692522:52_cdna Constitutive 0 NULL GeneID:788476 14 GENE LOC788476 NULL similar to olfactory receptor Olfr1174 EMBV3_32163 ACTCATACACTTGTTGGGGGTGGGTGTACAATGCATATCCCAAGCTGTGGAAAGGACACC Gene GeneID:100125926|TMED7:NM_001105496:201_cdna Constitutive 0 NULL GeneID:100125926 10 GENE TMED7 MGC157084 transmembrane emp24 protein transport domain containing 7 EMBV3_18022 CTGTTGCTCTGAGCAATCAGAATCGGGCATTTCTTAGAATGCTAGATGTTTATCCTTCTA Gene GeneID:512525|EFHA1:NM_001083416:40_cdna Constitutive 2 NULL GeneID:512525 12 GENE EFHA1 MGC142737 EF-hand domain family, member A1 EMBV3_19211 GGCAGCTCCGCGGCGGCGGCGGACGGAAAGCTCTTGAGCCTAGTGGGCCTCTAGGCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32107 TCAACGGGGGCATCACCGACATGCTCACAGAAAAGCAGCATCTGTGATAGCAAAGTACCC Variant GeneID:614688|POLB:NM_001034764:97_cdna 211^268 3 EMBV3_35522 GeneID:614688 27 GENE POLB MGC128623 polymerase (DNA directed), beta EMBV3_05050 GTAAAAGGCTGCCATTATGGACATTAGGTATCCCAACATAACCATCTGGAGTGTGTCCAG Gene GeneID:539034|PFN2:NM_001128197:47_cdna Constitutive 0 NULL GeneID:539034 1 GENE PFN2 NULL profilin 2 EMBV3_41324 GGCTTTGCACAAGTGAAGGATGAAAGACTCAGAAGGTATGCAGACTCCAGACTGGTCTCC Gene GeneID:281174|FUT1:NM_177499:29_cdna Constitutive 0 NULL GeneID:281174 18 GENE FUT1 NULL fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group) EMBV3_20150 CCCATGCCACCTTGACCGCTGGGGAAAACGAAACATAAATGTGATAAGGCAACCTGTTCC Gene BVT0102_192243 - 0 NULL GK000011.2:14827972-14834021 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024171 TCONS_00024166 TCONS_00024167 TCONS_00024172 TCONS_00024169 TCONS_00024170 TCONS_00024168 1 XLOC_014456 Coding TCONS_00024168 XLOC_014456 Coding Coding SLC30A6 11:14781532-14831229 = TSS17799 5066 1 TCONS_00024168_2 461 0.113501776549546 14 0.89834191886671 4.79115758536918e-29 2.90338554268431e-05 1.58052408033479e-12 0 7.95823648826513e-11 4.87068775235574e-13 9.22447726893704e-13 6.97284345087251e-13 7.03269382355045e-10 2.59889673217124e-19 4.48971633688212e-20 1.04083354576106e-11 7.44410043389066e-13 0 3.07976358522783e-09 1.10419308890044e-05 0.000436957708026165 6.21937113668662e-19 1.27170509140224e-10 0 0 0.00106186910214602 0.000457932521862908 0.00130708097813665 6.09886422561245e-13 0 9.54214482646109e-10 3.39852417067304e-09 2.75425886886479e-07 1.61719936565708e-06 XM_005212526.1 zinc transporter PREDICTED: Bos taurus solute carrier family 30 (zinc transporter), 0.0 7748 100.00 0.847808922226609 NM_017964.3 zinc transporter Homo sapiens solute carrier family 30 (zinc transporter), member 6 0.0 2549 92.05 0.348993288590604 TCONS_00024168_2 sp|Q0VC54|ZNT6_BOVIN ZNT6_BOVIN Zinc transporter 6; 0.0 944 100.00 0.997830802603037 1 coding 0 0 0 0 0.0130287589460368 0.929411054860263 -0.00247631340525317 0.964822233869369 GGGAACTACCAGCTCCCAGAGCGTCTTCCGGTGGGAGCTGTGCCGCTCCTTATCATGGGGACAATTCATCTCTTTAGAAAACCACAAAGATCTTTTTTTGGCAAGTTATTACAGGAATTTAGACTTGTAGCAGCTGATCGAAGGTCCTGGAAGATACTGCTCTTTGGTGCAATAAACTTAACATGTACTGGCTTCCTGCTAATGTGGTGCAGTTCCACTAATAGTATAGCTTTAACTGCCTATACTTACCTGACCATTTTTGATCTTTTTAGTTTGATAACTTGTTTAGTAAGTTACTGGGTGATGATGAGGAAACCTAGCCCTGCCTATTCATTTGGATTTGAAAGATTAGAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTTATTTTAAAAGAAAGCGCAGAACGCTTTTTGGAGCAGCCCGAGATACACACGGGAAGATTATTAGTTGGTACTTTTGTGGCTCTTTCCTTCAACCTGTTCACAATGCTTTCAATTCGGAATAAACCTTTTGCTTATGTTTCTGAAGCTGCAAGTACGAGTTGGCTTCAAGAGCATGTTGCAGATCTTAGTAGAAGCTTGTGTGGAATTATTCCAGGACTTAGCAGTATCTTCCTTCCCCGAATGAATCCATTTGTTTTGATTGATCTTGCTGGAGCATTTGCTCTTTGTATTACTTATATGCTAATTGAAATTAATAATTACTTTGCTGTAGACACTGCGTCAGCCATTGCCATTGCTCTGATGACGTTCGGCACTATGTATCCCATGAGCGTGTACAGTGGGAAAGTGTTACTCCAGACAACACCACCCCATGTTATTGGTCAGTTGGACAAACTTATCAGAGAGGTATCTACCTTGGATGGAGTTTTGGAAGTCCGAAATGAGCATTTTTGGACCCTAGGTTTTGGCTCATTGGCTGGATCAGTTCACGTGAGAATTCGACGAGATGCCAATGAACAAATGGTTCTTGCTCATGTGACCAACAGGCTGTACACGCTTGTATCTACTCTGACTGTTCAGATATTCAAGGATGATTGGATCAGGCCTGCCTTACTGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTACAGATCATCACGTAATCCCAATGCCTCCTCTTAAGGGTACTGATGATTCAAACCCTGTCACATCAACTCCAACTAAACCTAGTAGTCCACCTCCAGAATTTTCATTTAACACCCCTGGAAAAAATGTGAGCCCAGTTATTCTTCTAAATACGCAAACAAGACCTTACGGTTTGGGTCTTAATCATGGACACGCACCTTATAGCAGCGTGCTTAATCAAGGACTTGGAGTTCCAGGCATTGGAGCAACCCAAGGATTCAGGACTGGTTTTACAAATATCCCGAGTAGATATGGAACTAACAATAGAATTGGACAACCAAGACCATGATGTACTATAATTTAATTTATTTTTATGAGGAATATTGACTCCTTGAGTTTCAGTTTATTTAGTAATCCACTTTGCATCGACTGTTCAATCATTTACTCTAAATGTTAGAGAGTAGTAGGCTTGTTCACATTTCATGAAACCAATGAAACTATATTTTTGTAAAACATTTGGGGCAGTGAGAACCTTTTAAATGTTATAGACTTTAAATAGGCTTCCTTTAGAAAGTGTGTTCTCTAAATTTGAATTTTGCTATCTTTGGTTTTGTAGTTGACTGCAGCGTGATATAACATTACCTTTATAAGAGAACCACTTGATGGAGTAGATTTGTCACATTATTAAAAATATAATGCTTTCTTCAGTGAAATTTATAAACTTGCTTCTTGAGTACACATTTTAGGAAAGGAAAAAAAATGTCTATTCTAAAAGTAAAAGTCTCTTTTATAGGTTTTCCAAACTTAATTGCTACATTTTTCTTTGAGGTCCTCCTGTGGTATGCAAAGTAAAAGCAAACATTTTTATCAGAAATTTTGAAACATATTTTACTATCTGGCACAGTTAAAAATTTTTAATTATCAGTTTTTTAATAGTTTTTCTCATTAAAAAATTTCAATACATTTGTAAGTGACCCATCAGTCTCACAATATCTTATTTTGGTTAAATAAACATCTTATCCTTAAGTGATATGCAGTGAAGGAATCCCAATTTTCAGTCTTACATTTAATTAAATACTGAGATAATGATAGATTTTTATCCTTCCTGTCACCTTTTTATTGGTTGACTTTGATTTTTCATTTTATTAACAAAATATCACATATATTACCAAAATATGTGGAATTACATGCAATGTAGTACTTTTTGATCCTTTTTTCAAAGTTGCATGAACAATTTGAACTTAAATTATGTAATTTTGCCAAAATCTAGTGCACCTTAGGTTTATAAGTACTGGTTAGATCTGCAGTAGGCAGTTTCTAATTTATTTTGTTCTGCTTCATTGAAAATAGTGAATTGTTAACATTTATAATGAAGTGTGAGAATCATGTAGATTATTTTATTTTTAAATTATTTTCCAAATGCAAATGTTAAGGACTTTCCAACATGGCCAGTATTACTTATAAAAAGTATAACAAGCAACAGTCACAAATTACCTATGATTTTTTTTTTTCTCGTTTTATCATGCATTTTATACTTAGGTTTTAAAATTGGATTTTGAGAGTGGATTCAGCTTTTCTAGAATTCAGTACTCCTGGAGATTTGTGACATTTCCAGCCATCAGCAACTATCTAGAGAAGTGTTTTTTTTTTTTTTTTTTAATTTGCAACTTTCTTCAATCAACTCATCCTCTTTTAAATATAAGCAACCCTCCCAAATTCCTGTTTCTTTACAGTGGAGTAATAAACATCTAAGAAGCCATCTCTGTCAAGTAGAATTGTAGTCACGCTGTGACAATAAGTGACCAGGTCCCAAGTAACTTTTGCTTGATGAGGAGTTGATCGTTGTCTTTGACATTTGCAGCCCTGTTCAGCCATTTGACCTGCTGAAGAAATAGAGCCCATGCCACCTTGACCGCTGGGGAAAACGAAACATAAATGTGATAAGGCAACCTGTTCCTTGACATTTATCTTTCGTCCTCCAACTATTTCTATACCTATTATTGGTCTACTATTACAGGGTGATTTTTCTTCCATTGATCTCATCTAAATGTGAATTTGGGTCATGCGTGAAATCTGAAGAACTGCCTTGTACTGAATGATGATTAAGAGGTATGTGCTGCCACTCTATGCATGTCTTCTCCGTTTCCAGGGGATTTTTAAAGTGCCCGGGTACTAAACACAGTTCTGTGCAAGGTTAAATGCCTGTTTCCTCAACACTCATTCAAAGGTTACATCTGTTCTGTTGTCCTTCCAAAGGTGCTTTGATAACCGACTGCACTACTTGAGAAGTTGCATGTGGGTCTTGAAGGGTTGGCTCTACTTGCCGAAATTTGATAATGCCAATTGCTGCAGGTGGCATTGCTCCAGGCATTATTATATAAAGAAGTCTTATTTGCCAACCTTTGGATAGGTTCTGGATATGAAAATAAGAAACTTGGCCAGCGTAAGCCTTGATTTAGTAGCCTAACTGGTAAATCTTGCCATGGAGTTACATGAAGCTAGACCAGGAAGCACGTTTGAGTTAAAAACTTGACCCATGGTTTGTGATTAAGAGCAAGTTCCATGGAGTGTGATTAATCTTGTTTGAGAAATTACTGTTTTATAATGGAGGAAAACACTGGGCTGGAAGACAAGAGATTTGGATTCCAGTCCTGATGCTGCCACTGTTTGAGTAGTTTTATAACCATGGGTAAGTCATTTAACTCCTCTGAGCTTTCTCATCTGTAAAGTTAGGGTGGGGAATGAAGTAGTTGATCTATAAACTGTCAGCTCTAAAACTGTATTACTAAATCTGCAGAAAATATATCCACTTGTGAAATAGAATATTGTACCAAGAATTTCTTTTTAGTGACTACCTCAACATACAGGCCAAGTGTTACCTATGCCAACACCCAAGCCATTAATTTGAGGTGCCATGAGAACAGAGAGTAAACTAAAGGCTGACATTTGGTTTTTGTGTATTTCAGAGTTGCCTCAACTTAAATCTGTTTAGCTTAAACAGATTTTTCTTAGACTTCTTTCTTTGTGAGGAAGGATTATTTTGGGAGGTGTTGGGGAAAAGATTAGGACAGGGTACTCTTACCTTTCACAGGGTACGAAAGAATGGGATCCATTTTTTCTTCTTTAATCTCTGAAGTCACAGATGGAATTGCATACATGTATCAGCAACTGGTTTAGCTACTCATTCAAGCATCTGATTGAGCTACTCATAAACTGCCAATTTTTTGCTTAACTAAAGATTGCTGATTTTGCGGGGGGAGCCTGATCTGCTTTTTATACAAGAAAATACTTTTACATTCCAAATTGTTTGAATTAAACTATTTGAATAAAGAACATTCGTGAACTTTCTCTCTGCTTTTAAATAATTTTGGCCTGTTTGTTTCAATAGCTATTTATTGGTAACTTTATCTCATATTCAGCAAATGCTCGTCAGGAGTATAGTACATGCCATGCACTGTACTAAGTAAATGTGCATATAGTATATAAATTTTGGTGACCTGCTATTCTTGAGACTGAAGAGAATACAAGGATAAACAGGAATCCCCTTCAAGTAGCTGATAGAAGTGACCTATTTATCAGTTCAGTTCAGTCGCTCAGTCGAGTCTGACTCTTTGTGACCCCATGGACTGCAGCACGCCAGGTCTCCCTCTCCATCACCAACTCCCAGAGTTTACTCAAACTCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTTATCCTCTGTCTTCTCCCGCCTTCAGTCTTTTCCAGCATTAGGGTCTTTTCATATGAGTCAGTTCTTCACATCAAGTGGCCAAAGTATTGGAGTTTCAGCTTCAGTATCAGTCCTTCCAATGAATATTCAGTACTGATTTCTTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTTCAAGAGTCTTCTCCAACACCACAGTTCAAAGGCATCAATTCTTCAGTGCTCAGCTTTCTTTGTAGTCCAAC EMBV3_39369 CGGCCGCGGACAGGCAGTTTCTCCTTTCGGATCATGCATGCGTTCACCAACATCAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12601 ATGAAGGGAAGAGAAATGGAAGAAGGTTTTCCCCGTTACAAGGACTCAGCACACCCTGGC Gene GeneID:790618|LOC790618:XM_002690558:174_cdna Constitutive 0 NULL GeneID:790618 10 GENE LOC790618 NULL similar to T-cell receptor alpha chain V region PY14 EMBV3_05800 ATGGGCTTTATGCTCACTTTTGGAAACACCAATGTCATACTCAGCTTTCAAAGAATCAGA Gene BVV0102_120086 + 0 NULL GK000009.2:15046952-15058057 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236672 TCONS_00236673 TCONS_00236674 TCONS_00236671 1 XLOC_144546 Coding TCONS_00236672 XLOC_144546 Coding Coding TMEM30A 9:15055159-15102931 j TSS177126 4925 1 TCONS_00236672_5 309 0.0345177664974619 7 0.897050511816793 0.000628232836365158 0.00019980938565919 0.000564149230507526 0.000482731128423241 0.000439069595953029 0.000407252077042509 0.000556937259003699 0.000588857827509251 0.000720371580773418 0.000155256260543106 0.000164624713682864 0.000121059264535314 1.60255194929024e-10 0.000340467773690957 1.71761788247236e-08 0.00363010842421336 0.00395689323096099 0.00395517292677978 1.77905848317343e-05 0.000537841086139821 0.000147085266917947 0.00390307937825458 0.00379850802031379 0.00362866573005727 0.000380442628178317 0.000832404304096491 0.00040860394160009 0.000833435301512876 0.000463012244188728 0.00161768045847239 NM_001075223.1 TMEM30A Bos taurus transmembrane protein 30A (TMEM30A), mRNA. 0.0 1793 100.00 0.201624365482234 NM_001143958.1 TMEM30A Homo sapiens transmembrane protein 30A (TMEM30A), transcript 0.0 2484 78.23 0.616243654822335 TCONS_00236672_5 sp|Q9NV96|CC50A_HUMAN CC50A_HUMAN Cell cycle control protein 50A; 0.0 530 90.79 0.980582524271845 1 coding 0 0 0 0 -0.0828721848183171 0.677706853488601 -0.0603456135097114 0.514377665890386 GTAAACCCAGTCACATGATTTATTCCTGAGAACATAAAGGTCACCAACCATATACATCCCACTTAATATTTATCCTCGCACTTTGAGTGGAGGTTTATTTTTTTAAGTAGACAAAGTCGTGGTTTTGTAACTCAAGCAAATACTGCCAATGCCACGAGGTTCAGGCTCTGTGTGGCCTTTTCAATGCTGCGCTCCCCTTCACAGAGGACCTCGAAGTAAAGGAAACACCTAGCTGGCGTTGAAGCCATCCGCCCCTTGGCTGACGGAAGCAGTGCGGGCCGGGCGGATCCGTCAACCACCTGAAACAGCCGTCGCCATGATACCAAAAAGAGCGGACAGGTGTGTGCGAACAGAAGCTTCCGTGAGCCGAGTGGAAGACACGCTTATGGCGCAAGCGCCGAGGCCTCTTCGCCCCACCCTCCCCAGGGCCGCGCATGCGCCGACGTAGCTTCACGCTCTGGGGATAGAAGCCTTCACTTTGTCGTCACAGGACAGATGATCAAGGTGCGTCCGCCTTTTCCCTCCCCCTTCCATCCTCCTCCCTTTCCCCCTCCCCTTGTCCCTCAGTCTTCTCCCTCCTTCCTCTCTCCCTCCCTCTGGCGTCCCCCACCGACTCTCGCTTCCGGTCGGCGGCTGTCTGCGGAAGGGTGTCCCGCCCCTTCCGCCTTTACAGCGGCAACAGCGGCGGCGGCGGCGGCGCCTGCGCGTCTTCTGTCAGGGTCAGCAGGCGGGTGCCCTGGGCCGTCCACCTGCGCGTCTCGGAGCCGCGCCCGGGGGGTCGATGGCGATGAACTATAACGCGAAGGATGAAGTGGACGGCGGGCCCCCGTGTCCTCCCGGGGGCACCGCTAAGACCCGGAGACCAGATAACACGGCCTTCAAACAGCAACGGCTGCCGGCTTGGCAGCCCATCCTGACGGCTGGCACGGTGCTGCCCACCTTCTTCATCATCGGCCTCATCTTCATCCCCATTGGCATCGGCATCTTCGTCACCTCCAACAACATCCGCGAGATCGAGATTGATTATACCGGAACAGATCCTTCCAGTCCCTGTAATAAATGTTTGTCTCCGAATGTTACACCTTGTGTTTGTACCATTAACTTCACACTGGAACAGTCATTTGAGGGCAATGTATTTATGTATTATGGACTGTCTAATTTCTATCAAAACCATCGTCGCTATGTGAAATCGCGAGATGATGGTCAGCTAAATGGAGATCCTAGTGCTTTGCTTAATCCCAGTAAGGAGTGTGAGCCTTATCGAAGAAATGAAGACAAACCAATTGCTCCTTGTGGGGCTATAGCCAACAGCATGTTTAATGATACACTAGAATTGTTTCAGGTTGGCAATGCATCTGATCTTACGCCTATTCCTTTGAAAAAGAAAGGTATTGCTTGGTGGACAGATAAAAATGTAAAATTCAGAAATCCCCCTGGAACAGATCCCTTAGAAGAACGATTCAAAGGCACAACAAAGCCAGTAAACTGGGTTAAACCAGTTTACATGTTGGATTCTGACGAAGATAATAATGGCTTCATAAATGAGGATTTTATTGTTTGGATGCGTACTGCAGCATTACCTACTTTTCGTAAGTTATATCGTCTTATAGAGCGGAAAAATGATTTACATCCAACATTACCAGCTGGACGATACTATTTGAATATCACATACATCTTTGTCTTCTGCTTCTTCCTTATGGATGACTTATGAAAATATATGACGGGTATAAAACAGATTAGCTATACTGATCATATCAACACTGTAACTGTTGAAATGGCATTATGATGTTTCTTTTTTGTTGGGACAGGCTGTGTGATGCATAGAGCCTCTTTCATGTGAAATGCGTCTGCTGCTTATATGTTTATGCTGTGTTGATGATAATATATTGACATATGATACTGTATATGTGTGCCTGTTGTGTGAAGAACGGGATTACAAGATGTATGAGTATAACGACTTGCTAACCTTTCAGGATCCAGAGTTACAAAAAGATGAAGACCAAATCTAAATAAAACACTTCATCATTTTCATGTGTCGTGTGTAAAGGCTTAAAGTACCATCTTTGTTGAGGTGATTCCTGTATTCAGCTTATCCAGTACAATTGTCAAGCTTAGATTTGATTTCAAAGGACATGCTTAACCTGGCTAGCATAGGAATTAATGCTCGTGTCTGAAGAGGTCAGGTGGGTCTCAGGAGAATTTAAAATTCCACTTCCCATTTTGGCTAAGATGTTGCAGTCAGGAAACTCATCTTGCTGTTTTTACACGTGACCATTTCCCTTGAAGCTTACACTTCATCAGGGATCCAAGAATATAGGTGAGAGGGGAAAACTTCTTGGCAGACCTTGTCTTCTGTCTCAACTATAAACCAGGTATAAATGTTCAAAGGAGACTTTTCATTCTTGTGGTATTTAACATTCAGAAATTTGCTTCAGCATTGGAAATACCTCAAGCTGTTTTTAATTTGCAGGTAAGTGTTTTGACCTAAGTACTAATATTATATTTCTGAGGTTTTAGAAAACAGTAACCTTTATTTCCTCTATATTTCATCCAGTTTTTACATGTAGGTCAAATGTGGATGTGTACGGACATTCTCTTTAGTTATGGCACCAATTGTTTTGGTTGGTTTTTCTCAGACGTACTTTCAAAAGAAATTCTTTAAATTTCCTAATTAAATTCTGGAGATTTCGGAGTATGTACACGGTAAATTATAATATATATGCTTGAAGTTATTTTATTTTCTATTAACTGGAATTATTTTTAATATTCCTTCTTGAATAAATGCTGTAATTTGTTTGCTATGGAACTGATTCTTGAATGTAAACTTATTTTTTCACATGCATGAAATGTATGTCTTAATCAGAGGTGGCTTAACTGCATTGAAATGGCTATTTTTTTTAAAGCTAAAATAACTCATATGTTTGTATAGAAAAATGCCTGTTTGAATTAAGAGTTTGTAATGGTTTCCTTTGGTTATATGTTAAATCAAAAGGTCTGTGTAATGTATCAATTTTGACTACATTTTTAAAAAAAAATAATGTAATGGTAATAGTAGAAATGTGCCACACTTAAGTTTTGTACAATATGAAATTCAGTTAAAAGAACTTGTGGTTCATACTTAACAGAATATTACTTGCATGAAGTACTTAATGTTTGGTTATCCTGAAGTTTCTGAGTGCATAGGGTATTCTTTGTGTAAAACTATGTTTTTGTCAGTCGTTCAGAATATGGTTATTTATTCTGATAATTGACCCTCTTGCACATGGCAGTGTATTTTCTGGGATATATCAGTAGGGGAGAGGGCTTCTGCCAGTATTTGCAGGTTGAGTTTGTGCTGTTTAAGAAGGACTGACTGCCATCCTGCATCTCTTTTTCTAACTGGGGGACCAGGATTGCCGCTACAGAAAAGTCGAAGAGCCTCTCCAACCTTTTGTCATCTGTGGTGAAGATGGAATCTTAAAATATATTTGGAGTTTTATCTGTTTTTACAAATACATTGATGGCCTAAGTTCTCCCTTGTCTGCTGCCATTTGAGTTGTAAGGGATTCCTGTTGCTAAATACGAAGAATGTGGAACACTCATATGGCCTCTGTGACTGGGGGAAGGAAGGAAAACATTTCTTTCTTATGGGCTTTATGCTCACTTTTGGAAACACCAATGTCATACTCAGCTTTCAAAGAATCAGAATGCATTTTAAGACAACTAGGTTGAGTAGAAGGCATTGAAGAATACATTAACTTGCTGGAAATAATTGTGATATATGAAGTTCCCAATTGATGGAATTATTTAATATGTAAAGACTAAGAAATTTCTTTGAAATCATAAAGCAGTTTAAAAATAAATTGGTAAAAATAACTGTACTACCTAATAGAGAATTATTCAACCAAGAGAAGAGTCAAGTGACTATTATTTGTTTATTGGTTAGTAACAGTTTATTTGTAAGCTTGATTATATTGAAAGATAACTTACTGTTAGTATATTCTGTATTAATAAAAATGAAAAATATTAATTTTGCTATGTTTAAGTGTCTTGCTAAAATAACAGTGCCCCAGTATTGTTGTTAATATTTAGCTCTAAATTTTAGCCCAAGCTCAATGAGTCCAGGTTTTAACATTTCCATGCCTAGATTTGATTGCCATCTGTATGTGTATTAGTCACTCTAACAGCATTAATTGCAAGATATATCTACACTACTGAGCAGCATCTGTTCTCCTTAGGAAGTGGTCAGAGTATAACCTCAGTTATAGGCAGACAGGCTAGATTTGGTATTAGAGCGAGGGAAATTTTTGGTAAATAGAAAATGAAAAACTGGTAGGGAGACAAGGGCGATGAAAATAATGAACAAGGTGGGGGGGTGGCATAAGAAATGAAAAGCCAGACTAGGAAAGAGGAGCGGCTGAGAGGTACGCCTAATGGTTGCTGCTAAGCCTCTCATCTCCTGTCTTCATGGGAACACTGCCTTCGCGTTACTCTGTCATCCTGTGCTGGTTAAGCTGCAGAATTCTGTTCTTTGTGAACATGGCTATTTTGAGGGGAGGATGGAGGGAGTAAGGAAGTGCTGTTTCAAGGAGAATTTGATGCATAAATGTAGTATTTGGATAATCTAGCAAAGTGTATTAGAGCTGGTTTCTTGTCCATGCCCTTCAGTAAACATAAAAATTATATTTCCCCTAATGTCATTTGAAATTTCAGAATAAATATGTCTAAAATCGAGTCAGACCATGGTGACCTTATTTCCTTTTATATATCTAAAATTTATCAAACTAATGTACACAGTTAAAAAAATATCTGAAGGCATTAAGATGAAAAACAGCAGTACCTGCTCCAGCTTTTCTAGAGGTGATCACTTTGACTTCAAAAGTTGTTACTTTTGGTATTTATCTTGGTGTATCTAAATAACATGCCTATTCTACTATTGCTTGATT EMBV3_21990 GCCAATCTAATCCCAGGAAAGAAGATGCAACAAAGCTAGAATGTGAATATAACTTTAGCG Gene GeneID:532851|LASP1:NM_001035394:132_cdna Constitutive 1 NULL GeneID:532851 19 GENE LASP1 MGC128762 LIM and SH3 protein 1 EMBV3_40342 TTCAGCTGTGGGATATTTGCTGGGATTCTGGCCTCGCTGGTAACTCAACCTGCAGATGTG Gene GeneID:512325|SLC25A38:NM_001014905:86_cdna UTR3_Alt 2 NULL GeneID:512325 22 GENE SLC25A38 FLJ20551 solute carrier family 25, member 38 EMBV3_23867 GAGACCTCTACAGTGCATGGCACTCCAGTTTCCATTTCTGTGTGGCCTGACTGTAATCCA Gene BVV0102_164163 - 0 NULL GK000030.2:106265722-107157274 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42191 CTCGCTGACCCTTTCTACAGCGGTTGCTCGGAGGACTTCTCCTCCCGGGTGTGAGGGAGT Gene BVT0102_163762 - 0 NULL GK000015.2:78254814-78255667 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060129 TCONS_00060130 TCONS_00062424 TCONS_00062423 2 XLOC_036591 XLOC_037294 Coding TCONS_00062424 XLOC_037294 Coding Coding ARFGAP2 15:78254745-78265317 = TSS46266 2987 1 TCONS_00062424_5 520 16 0.718948065462113 0.0030813602899684 0.000502544882185659 0.000728469296779178 0.00151907454598832 0.0010583153844955 6.97888137617924e-05 0.000509543622038223 0.000911888586513548 0.00138937066854888 0.000427499834539576 1.6746848061959e-16 1.3897598201131e-49 7.52435924571387e-05 8.38095357343002e-06 1.96532560479087e-05 0.0056980070236501 0.00141076226572637 0.00134535179315085 7.87538844659089e-06 0.00117732530787752 2.91333150667897e-07 0.00193898690872674 0.00128109802475657 0.00198775159396874 0.000532609620938013 0.00027028839018514 0.000290002195034955 0.000754762492839052 0.000276763730979738 4.93001622586711e-07 XM_005216410.1 ARFGAP2 PREDICTED: Bos taurus ADP-ribosylation factor GTPase activating protein 2 (ARFGAP2), transcript variant X1, mRNA. 0.0 5304 98.61 0.999330431871443 NM_032389.4 ARFGAP2 Homo sapiens ADP-ribosylation factor GTPase activating protein 2 (ARFGAP2), transcript variant 1, mRNA. 0.0 2439 82.85 0.787746903247405 TCONS_00062424_5 sp|A1L520|ARFG2_BOVIN ARFG2_BOVIN ADP-ribosylation factor GTPase-activating protein 2; 0.0 1076 100.00 0.998076923076923 1 coding 1 1 1 1 0.00142365352166618 0.989182921025899 -0.00108645604815161 0.985247965515914 CCGCCCGCTGACCCGCCTTGGCGGCCGCGGATTGGCCCGTAGCGGGACCCGTCGGTCGCGCTGCTGTTCTGGGAAGGAGAGAAAATGGCGGCCGAGCCTAACAAGACCGAGATCCAGACGTTTTTTAAGAGGCTTCGCGCAATTCCGACCAACAAGGCCTGCTTCGACTGTGGCGCTAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTTCTGTGCATTGACTGCTCCGGGGTGCATCGCTCCCTGGGCGTCCATCTCAGCTTCATCAGGTCCACAGAGTTGGATTCCACCTGGAGCTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGACAGCCTTCTTCCGCCAACATGGATGCACAGCCAATGATGCTAACACCAAGTATAACAGTCGAGCTGCCCAGATGTACCGAGAGAAGATCCGGCAGCTGGGCAGCGCGGCCCTGGCTCGGCATGGCACTGATCTTTGGACAGACAGTGTGAGTACTGCTCCCAGTCACTCCCCAGAGAAGAAGGAGTCCGATTTCTTCTTGGAACACACTCAACCCCCTGCCTGGAATGCACCAGTCACCGACCTGTCAGAGACCCAGCAGCCAGCCCCATCTGCAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCCAACATGGACCTGCTTGGCACCTCACCCAAAGCCTCTCTGGAACCGAAAACCTCCCTCATTGGCAAGAAGAAGCCAGCAGCAGCGAAGAAGGGGCTGGGTGCCAAGAAGGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAGTTTCAGCGAGATTGAGCGGCAGGCCCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGTGGCTGATGCCAAGAAGCAGGCCGAGGAGTCCATGGTTGCCTCCATGCGTCTGGCCTACCAGGAGCTCCAGATTGACCGTAAGAAGGAGGAGAAGAAGCTACAGAACCTGGAAGGAAAGAAGCGAGAGCAGGCCGAGAGGTTGGGCATGGGACTGGTGTCCCGAAGCTCCGTCTCGCACTCGGTGCTGTCTGAGATGCAGGTGATCGAGCAGGAAACCCCAGTGAGTGCCAAGTCCTCCCGCTCGCAGCTGGACTTATTTGACGACGTTGGCACCTTCGCCTCTGGGCCTCCAAAGTACAAGGACAACCCCTTCTCCTTGGGGGAGAGTTTCGGTTCCCGCTGGGATACGGACACTGCCTGGGGTATGGACAGGATGGAGGAGAAGGAGCCGGAAGTGACCGTTTCCAGCATCCGGCCCGTTTCAGAAAGAGTCACCAACCGGAGGGAAGTGGAGAGCCGGAGCTCGGGCCTGGAGTCGAGTGAAGCACGTCAGAAATTTGCAGGAGCTAAAGCCATCTCCTCCGACATGTTCTTCGGGCGGGAGGTGGATACTGAGTATGAAGCCAGGTCCCGGCTCCAGCAGCTCTCGGGCAGCAGCGCCATCAGCTCGTCAGACCTCTTCGGGGACGTGGATGGAGCTCATGGAGCAGGCAGCGTGTCCCTGGGGAATGTGCTGCCCACGGCTGACATCGCCCAGTTTAAGCAGGGCGTCAAGTCTGTGGCCGGGAAGATGGCCGTGCTGGCCAATGGCGTGATGAACTCTTTGCAGGATCGCTACGGTTCCTACTGACCCAGGCTCCGTGTCTCAGACTTTGGGTGGTGGCAGTAGCAGAAACCTCACGATTCCTCAGCCTGGGATGCTTGCCTTGTGGAAGCTAGGGAGGCGTTGTTACTTTATGCCTGTGGTGTGAGTGGGGTGGCCTGCGAGGAGCTCCGGTGAGGGAGGGGCAGTGCCGGCCCCTGACCTCTGCCTGGAGATTGGGCCCTTTGTTCCCCTCCCCATACACACTGACCTCTGCCTGGAGATCGGGCCCTTCGTTCCCCTCCCCACACACCCCACCCTGTGTGCTCCGTGCTTCTGTTCCTGCCCCCCACGCTGCTGCTCACTTGGCCTGCCACCCTGGGGGTGAGGGGAGGGCATTCCCTCAGGATGGCTTATTCTGGGTTCAGGCCTTCCCCGAGGAGGGAGAGTAAAAAGTGGAAGGCTGTTTTGCCGGCTCTAGGATCCTTCCAGGTGGTCCCGGGGGTTGGCTCCTGGCTCTGGAAGCGGCAGGAGGTCTGGAGAGTTCTGCTGTAGATCAGCCTCCAGGGTGGGAGGCTGTGGATGTGCTGCTGCTCCTGTGGTCTCTTCCGGCACCAGGAGAGGGCAGGGGAGGGGAAGGACCCTCTGTCTAAGACTTGCGAAGGGCTAGAAGCTTGATCCGGTACCTAAAGCTTCCATTTGGGATCAGACTAGAGGCCTGAGTGATCTTCTCCTGTCTCGCTGACCCTTTCTACAGCGGTTGCTCGGAGGACTTCTCCTCCCGGGTGTGAGGGACCGGGTGTGTGGGAGTCCTCCCGGGTGTGAGGGAGTCCTCCCGGGTGTGAGGGAGTCCTCCTCCTGGGTGTGAGGGAGTCCTCCTCCCGGGTGTGAGGGAGTCCTCCTCCCGGGTGTGAGGGAGTCCTCCCATGCCATCCGTGGTGGACCGCGGTCCCTCGGAAACTCTGCCCCTTCTTCCCTTGCTTGGTGGCCATGGTGTCTGCTCTGCCCGGGGCTCTGCTCTGGATGCCGTGAACGTAGTGCTGGCCGAGGAGGCAGAGGATGCGTGGGATGGAAGCAGGCTCCTGGGCTCGGCTTTTCTCCTCTGCACCATCTTGGCCTCAGGACCCTGGGCAGCACCCCCCACGGAGAGCTCGTGGCACCTGCGGGGCGGCAGGTCTTGGCCCTGGGCCACACACTGTGCCATCCTTGGTGCCACCTGCCCCTGCTGCTGGCAGCCCGGGTCCCCCCACCGTGACGGGGGCTGGGCTCCCAAGCGCTGCAGACCGCTGTTCCCAGCACCCCTCCCCAAAGGGACGTGACTTTCTTTCTGGACTGTATTGAAACAAAGTGGTGTCGAATAAAGCCCCGACGGGGCCCTGGGTCTCTGC EMBV3_16920 AGAGGAAAATAAAAAGAAGAGGGAGTGTCCAGCCACAAGGTCTACAGGAAGGTACTTGCC Gene BVT0102_311554 + 1 EMBV3_21469 GK000030.2:89908676-89987695 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252498 1 XLOC_155439 NonCoding TCONS_00252498 XLOC_155439 NonCoding NonCoding - X:89973227-89974973 - TSS189719 1746 1 TCONS_00252498_3 174 1 0 0 0 0 3.80488373191137e-05 2.82771408061424e-06 4.60960980510255e-06 0.000103541190784297 2.03255201711523e-05 0.000845048376077508 0.00120654111854403 5.63775840921732e-05 4.91504833482904e-05 0.000299089167613756 0.000546913091181916 0.00042430496864388 3.02538001646505e-05 9.50874189409783e-06 0 0 0.0003418610584704 0 0.000238006208951034 0.000136612429397148 2.88052008655085e-05 0.000130950619898939 0.000143249747500199 8.05380888348229e-05 0.000148533757374075 0.000180727140511075 6.54253373705323e-05 NM_001102968.1 LOC100125049 Xenopus (Silurana) tropicalis uncharacterized LOC100125049 (LOC100125049), mRNA. 4e-40 170 69.56 0.24971363115693 0 noncoding GGAAAGGGTGGAACCTCATGTGGGCTCATAAAATATAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAATGTCTTAGGAGTCATGTTACTAGCTGAACAGGTGATGACATAAAAACCTTGGATTCTGCTTCAATCCAATTATTTCCATGTGTGTGTGTGTCTGTGTGTGTGTGTGCATGTGTGTGTTTGCTGACCCCAATTCAAAAGTTTAAGTTTAATCGCATGATTAAACTGATGTGATGTGCTTATATAAAATGGGTGAATTTTGCTATTTTAACTCTCACCAGGCAGTTTCATGTCCAAATTCTGTGGCTGAGACTTGGCAAGTACCTTCCTGTAGACCTTGTGGCTGGACACTCCCTCTTCTTTTTGTTTTCCTCTTAAAAAGATGGTTTTCTTTTTCCAGCACATGATTTATCTTTCATCAAAATTTCAGTGTCATCTTTGTGCTGTTTATATATAGACCCTTTCCACAGTAGCATAATTTACACTGGTCTGCTGTCTGTGTCCATCCCACTTCCTTCCCTGGGGCACTGCTTTCTCCTTCATAAGTCATTGTTTATTTAAGTCTCTTGTGTCTTTGCACACGAATGCTAAGCTTTATCTTATTCCAGCATCTATCTCTAGGACACCACTGGAAGGGAAGATGACAGAAGAGGGTTTGTCTACCGAATTGTAATAACATTTCATTCCTGTCTCCTTAAGACAGGCAGAAGCAGAGATGGACTATCAAAAGATGCAACAGAACCAGATGTAGAAACAGCCAGAGACAGGACAGCCTGACAGAAAAACAGAGATAGCTGGTCAGGCAGGCTGAGAAAGCCCAACAGATGGACAGACTCAGAAATTGTACCTCCTCCCGCAAAAGAGACAGCTAGAAAGGCATACACAGAAAGGGGCAGACAGAGACAGGTGGAAATAGATGGAGACAGAGACAGGGAGGCAGAGGAAGCCAGGCACAGACAGGGACAAACAGACACCCATTCAAACTAAGGCAAAGAATGGTGGTTGCAGACAGAGACAGGGAGACAGGCAGAGGCTGATTGACACAGAGAGAAAGACAGAGACAGACAGACTGAGAGACAGAGAAAGACAGACGCACACTGAAAGAGAGCCAACAGACATAGAGATAGTGATGGGGAGAGAGAGAGAGTCAGAGAGAAACAAGGTTGGGGGTGGGGAGAAAGACAGAGACAGATCGGGACAGAAAGGGAAAGACAAAGACAGACGGATGGAGAAAGAGACACAGAGAGATGCAGATACAGACGGATACAGGAGCACTGGAGAAATACAGAGACAGAGACAGAAACATAGAGACCCAGACACAAACAGATTGTCAGAAACAGAGAGAAACAGAAAGATAACGGACAGTAAGACAGAGACAGAGAGTGACGAAGATAGGCAGTCTGAGACAGAGACTGAGGAAGACAAAGACAGAGGTAGATAGAAATTAGACAGGGATGCAGACAGACATCATGGAGACAGAGACAGGGGATGACAGAGAGAGTGGCAGGCATACAGAGAGGGAAAGACAGAGACAGGGATAAATCCTCATCATTGTCAAGGACCACGTGGTATCCCATAGGGGTACATCTCTTTTAGTGTGGCGTTTACTTTGCTGTTATTTAGCTTGATGGTTTCCTGTAGCGTTACCATGACTATACATTTTGCCCTGCCTCCCCATCTCCCCATGCCTTTACGAAGAGGCTAACAAAATGAGTATCAACATGGGAAAAGGTTTC TCONS_00247530 . 5' 160769 TCONS_00247530 . 5' 160769 EMBV3_22967 CCCATATTTTATTTTCCACAATGTCACTACTATGAAATATTGGCTGTTCAGTAAAAATCC Gene GeneID:494116|ST8SIA6:NM_001103227:70_cdna Constitutive 2 NULL GeneID:494116 13 GENE ST8SIA6 MGC148307 SIAT8F ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 EMBV3_30732 AGACTTAATTACTAACTCCCAGGGGAGGGTTCCTCTGCTCCAACACCCCTGTTCCTGAGT Gene GeneID:506551|POMGNT1:NM_001024485:83_cdna Constitutive 0 NULL GeneID:506551 3 GENE POMGNT1 FLJ20277 protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase EMBV3_40171 ACAGGGAAGCAGAAATGAGAAACAGTATCTTAGCCCAAGTTCTGGATCAGTCAGCCCGGG Gene GeneID:509123|PDCD5:NM_001046024:574_cdna Constitutive 0 NULL GeneID:509123 18 GENE PDCD5 MGC127817 TFAR19 programmed cell death 5 EMBV3_17292 AGCAATTGTTTCCTGATCTTCGCCTACGCCGTCTCTCCTTCGAATACCCTGGATCAGCCG Gene BVV0102_310397 + 1 EMBV3_07502 GK000009.2:50515679-50574573 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241430 TCONS_00204180 TCONS_00138407 TCONS_00201377 TCONS_00132405 TCONS_00138406 TCONS_00254827 TCONS_00018727 TCONS_00199818 TCONS_00148378 TCONS_00206254 TCONS_00184696 TCONS_00196654 TCONS_00184697 TCONS_00220133 TCONS_00251614 TCONS_00056822 TCONS_00060246 TCONS_00156816 TCONS_00046799 TCONS_00206255 TCONS_00160954 TCONS_00137160 TCONS_00233185 TCONS_00166135 TCONS_00057018 TCONS_00057884 TCONS_00122090 TCONS_00203551 TCONS_00035886 TCONS_00190111 TCONS_00184695 TCONS_00058348 TCONS_00153262 TCONS_00197074 TCONS_00087961 TCONS_00062828 TCONS_00208783 TCONS_00143669 TCONS_00060247 TCONS_00254911 37 XLOC_148094 XLOC_124364 XLOC_084615 XLOC_123023 XLOC_080770 XLOC_084614 XLOC_157759 XLOC_009409 XLOC_121470 XLOC_090260 XLOC_124865 XLOC_111408 XLOC_118400 XLOC_133450 XLOC_154555 XLOC_034625 XLOC_036632 XLOC_095276 XLOC_026938 XLOC_097847 XLOC_083370 XLOC_142667 XLOC_100973 XLOC_034820 XLOC_035681 XLOC_073646 XLOC_124202 XLOC_021016 XLOC_116146 XLOC_036077 XLOC_093026 XLOC_118739 XLOC_052749 XLOC_037555 XLOC_127295 XLOC_088090 XLOC_157843 Coding TCONS_00196654 XLOC_118400 Coding Coding PNPLA3 5:114959864-115014122 = TSS146286 8151 1 TCONS_00196654_3 531 0.568151147098516 13 0.850010136940856 5.89876291415044e-05 3.15153418752854e-05 3.29130043297627e-05 2.59624223173378e-05 2.20213274024594e-05 1.4496162216887e-06 9.48251118053323e-05 5.15896206190356e-06 5.54760148107161e-05 0.000235938474950753 0.00019441326777349 8.9349876479414e-05 7.67343864975346e-06 3.61392880773479e-05 3.63228777626609e-05 0.00744770511677906 0.00251913245768283 0.00257607319979578 4.42586817272491e-06 1.86109887723752e-05 3.89347427037933e-06 0.00220176912508276 0.00197643567127696 0.00261654031494228 1.4581504266532e-05 3.01650521480806e-05 2.37076584200379e-05 0.000388194564081781 0.000566336010450564 0.00064585302379113 XM_002687974.3 PNPLA3 PREDICTED: Bos taurus patatin-like phospholipase domain containing 3 (PNPLA3), mRNA. 0.0 3041 100.00 0.206723101459944 XM_005261754.1 PNPLA3 PREDICTED: Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), transcript variant X1, mRNA. 0.0 686 73.55 0.133480554533186 TCONS_00196654_3 sp|Q9NST1|PLPL3_HUMAN PLPL3_HUMAN Patatin-like phospholipase domain-containing protein 3; 2e-148 439 57.81 0.704331450094162 1 coding 0 0 1 1 -0.0266304558446969 0.849327696487349 0.0012879508776763 0.980163879338 ATGGCTGGCACCAAGGTGGGCTTGGCTGAAGGCTGTGGGGACTGGAGCCAGCTAGGGTGGCAATTGGAGGTGGAGTCATCGCTTCACAAGCCAGACCCTCCTGTTGTGAACATCAGCCTGAGGGAAGTGGTCACCTCCAGCACGGACCTGTCCTCACGTTGCTGCTCCACCCTCTGCCTTGTCCCGGAGGAGCTTGCCCTGCCATGGGGCTGGCACCTGATGTTCCAGAGCAAGGCTGGGCCTGCGCTGGGCACTGGGGACAAGATGTCCCAGCTCTGGAGCCTCGCCTCCTGGATGACATTTGGGGCCCGTGGGAGCCCCTCCACGCCCGAACCTGGGAACAGCCACTTGCATTACATCGCTTCAGGCACCTGGCCCTTCGGGAGAGACATGCTGATCGACTTCAGCGGTATTCTGCTCCATCTCATTGCTGTCATCGTACTCAACAACTGCCTCCAGCATGACCAGACGTTGCAGATCCTCATGGACCTCACCCGGAGCGCCAGAAGCCAGAAATTCGGGATCGTCCACCCAGGCTTCAGTTTGAGCAAGCACATCCGAGACGGTCTCCAGAGACACCTCCCTGACAACGTCCACCAGCTTGTCTCGGGCAAGATGGTCATCTCGCTTACCAGAGTGTCGGACGGAAAAAACGTGCTGGTGTCGGATTTTCATTCCAAAGACGAAGTCGTGGACGCCTTGTGTTGTTCCTCCTACGTCCCTTTCATCTGTGGCTGGATCCCCCCTTCCTTCAGAGGCGTGCGATATGTGGATGGAGGAATAAGTGATAACATACCCTTTGTTGATACCAAAAGGACCATCACTGTGTCCCCCTTCTATGGGGAGAGCGACATCTGCCCCAAAGTCAAGTCCACGTTCTTTCTTAACGAAGGATTCACCAAGCTCAATATGCAGTTCTGCACAGAGAACCTCTACCTGATGTTCCAGTCGCTGTTCCCACCAGATGTCAAGGTGCTTGGAGAGCTATGCCTTCAAGGATATGTGGACGCGCTCAGGTTCTTGGAGAAGAATGGCATCCGTGATGGGCCCCATCCGTGCCTGAGCGCGCCCCCCGCAGAGTCGGAGCCCAGGAGCCTGGAGCCTTTTCTGGGTGTGGCCCCCAGGGAGGCGGGGCCCAAGCCAGTGGAGCTGCTGGACCACTTGCATCTCAGCATGCTGACCTGGGACGAGAGCGTCCTGGAGACCCAGTCGCCCGAGCTCAGCATGGCACTGAGGAAGGCAGTCAGAAACCCAGATGGGTACAGAAACAGGATTTGCAACTTCTTACCAGTTAAGATCATGTCCTACGTGATGCTGCCCTGTACGCTGCCCGTGGAGTCTGCCATCGCTGTGGTCCAGAGACTGGTGACGTGGCTTCCAGACATGCCCAGCGACATCCAGTGGCTGTGGTCGGCCACCTCCCACGTGTGTTCTCAAGCCATGGTGCGTCTGCTCCCCGCTTCCAGATCCCAAATCCCAGCAAGCAGCCAACGGCCTTCCTCCACAAACCCGGACACTGTGGGCGTCGCTGGGCTCTCTGCTCCTCCGAGGACCTGGACACGCACCCTGTGGATGTCCTGCAGAGGCCAGAGCTGACAACTATGATGTCCGCAGAATGACCTGTGTGCTGAGTTTGTAGTGTCCTGAAACCAAAGGCAATCTTTCTAACAAAAAGCTAGGAAGCTACTCTTGGTGTGCGCGGTGGGTGCAGAGCTCAAGCATATCCAGGATATGAGTCTCTAAATATCGTTGGCTCGGTTGGGAAACTGCACAAGGGAGCCCGGCGTGGGGGCATCTGTGGCTGACTCCTCACCCTCTCAGCTGCCCCAGGGCACGTTCCTAGGGTGACTGGTGTTTGGATCAGGGACGTTGTGGCGGGGAGCTGGGCTGCCCTTTGTGCAGTCACAGTGGTTGGGGGGAAGGACTGTGGTCCCATCTCTCCATAGAGAAAGCAGCCAGTGTCGGGGAGGTGGGGTGCCATCCTCCCAAGGACACCCCTGGTTTCAGGGGGCATTCCGAGGTGGTAACTTACGTGAACTCTGGTACATCTTTCTGCTGCTGCTACTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACTAGGCTCTTCTGTCCCTGGATTCTCCAGGCAAGAATACTGGAATGTGCCGGGGTCCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACAGCGTAGGCGAAGATCAGGAAACAACTGCTTAATTAAACGTTAATTAAGGATATAAGGAGTAATAGAATAAGGATAGTTCAGTAGGAAATTCAGTGAAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTGAGAGAAAGAACGACATGGGGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAATAGTTTTTATACCTTAAGTTATGGATAATGGGGGAAGGGGTGGAGTCATGCAAGGACAGCAGCTCCTGGTCCTAAATGAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAAAAACTTATTTTTCTCTAAAGGTGATTGGTCAGGAGCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGTCACAGGAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTGTAACTACTCAAAAGAATCTGTGTTTAGACAGTTTAGAACATCTCCTGCCTCTCACAGTTGGGAGGCTTTGAACAATCACATGTGGCCAGAAAAACCTATTCAGGCAGGCTAGAGGATTTCCAAAGGAGTTTGTAGCTTAAACACTGTCACACCCAGGAATTATTAACTGGAGCTGCAAGCCAACTCCTCTCCCAGAGAGGTAGTGGGGGACAGCCCCCCGCAAAGTCAGAGGTGCAGGTGAAGGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATGGGGGACTCCTGAGGCTCAATCCCGCCTTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCATGGGCGGAGTTCCTCACGCTGGCTCCTGGCAGTGATAGAATTCCAGTTGAGCTATTCCAGATCCTGAAAGATGATGCTGTGGAAAGTGCTGCACTCAATATGCAATATGCCGGCTCCCGGCAGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAATCAGTCGTGCCCGACTCTTAGCGACCTCATGGACTGCAGCCTACCAGGATCCTCTGTCCATGGGATTTTCCAGGCAATAGTACTTACCTATCCTAAATATTTGGTGGAGTTATATTAAACATAACTCTCAGCAGGCACTGAGAGAGAGCATCAGAGGGCAGACAGATGGAAACCACAATCACAGACAACAGGCCAATCTGATCAAACGGACCACCCAAGACGGACGGGTCATGGTGGAGAGGTCTGACGGAATGTGGACGACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCTTGAACAGCATGAAAAGCCAAAAAGATAGGACACTGAAAGATGAACCCCCCAGGTTGGTAGGTCGCTGATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAAATGAAGTGATGGGGCCAAAGCAAAAACACCACCCAGTTGTGGATGGGACTGGTGACAGAAGCAAGGTCCGATGCTGGAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAGGAGATGACAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTCAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATAGCTTGGTAATCCAAGCCTATGTCCCAACCAGTAACAGTGAAGAAGCTGAAGTCGAACAATTCTATGAAGACCTACAAGACCTTCTAGAACTAACACCCCAAAATGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGCCAAAAGCTAATAGAGTTCTGCTAAGAGAACACACTGGTCATAGCAAACACTCTCTTCCAACAACACAAGAGAAGATTCTACACATAGACATCACCAGATGGTCAACACTGAAATCAGATTGATTCTATTCTTTGAAGCCAAAGATGGAGAAGGTATATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTCAAGAAAGTGGAGAAAACCATTCAGATATGACCTAAATCAAATCCCTTATGACTATACAGTGGAAGTGAGAAATAGATTTAAGGGACTAGATGTGATAGAGTGCCTGATGAACTATGGACGCAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATACAAAAAAGCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAACTGAAGTGAAAAGCAGAGGAGAAAAGGAAAGATATAAGCATCTGAATGCAGAGTTCCAAAGAATAGCACAGAGAGATAAGAAAACCTTCCTCAGAGATCATGCAAAGAAATAGAGGAAAACGATAGAATGGGAAAGACGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAATCTTCATGACCCAGATAATCACGATGGTGTGATCACTGACCTATAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTACGAACAAAGCTAGTGGAGGTGATAGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACCCAATATGCCAGCAAATTTGGAACACTCAGCAGTGGCCACAGGACTGGAAAGGTTCAGTTTTCACTCCAATCCCAAAGAAGAGCAATGCAAAGAATGCTCAAGCAAACCACACAGTTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCATGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAATATTCACTGGATCATGGAAAAAGCAAGAGAATTCCAGAAAAACATCTATTTCTGCTTTCTTGACTACGCCAAAGCCATTGACTGTGTGGATCACAATCAACTGTGGAAAATTCTGGAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCCGTATGCAGTTCAGGAAGCAATAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTACTTATTTAACTTATATGCAGAATACATCATGAAAAACGCTGGGCTGGAGGAAGCACAAGGTGGAATCAAGATTGCCAGGAGAAATATCAATAACTTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGGTCCCATCACTTCATTGCAAATACATGGGGAAATAGTGACTGACTTTATTCTTCTGGGCTTCAAAATCACTGCAGAATGGTGACTGCAGCCACCATCTGAAATTAAAAGATGAAATTCAAAGGTGCATACTCCTCGGAAGGAAAGTTATAACCAACCTAGACAGGATATTATAAAGCACAGAGACATTACTTTGCCAACAGAGGTTCATCTAGTCAAGACTATGGTTTTTCCAGTGGTCATGTGTGGATGTGAGAGTTAGAATATAAAGAATGCTGAGCACAGAAGAATTGATGCTTTTGAACTGTCCTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATCTATCCAGTCCATCCTAAAGGAGATCAGTCCTGAATTTTCATTGTAAGGACTAATGTTGAAGCTGAAACTCCCAATACTTTGGCCACCTGATGTGAAGAGTTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAAAAGTGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTAATTGACAGAGGCCTACATGCTACAGTTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTTATATTAAACAAAGGATTCTTAAAATCTCTTGAATTATCTATTATGAGGATCAAGAAAACATTCAGAGAATAAGTCTTGAAAATAGAAATCCAGTGCATAAGACAGTCACCCTGGCACCTGCCCCCGCACCCCTCCCCCGCGAGCTCTAATGGAGACGAGCAGGAGGCAGGCACGCACCGTCTCTCCAGGGTGGTAATCTGTTGGCAGGCACAGATTACATGGGCCCACTGCCCGTGTAATATGACCCAAGGAGCAATGTGGCGTGCGTTTTGCTTATTTATGCATTTGAGGATACCAAAAAGGAAAGGAACAATCAGCTCAAATCCTACTTCTGGGCGTGCAAAGTCACAGCTCTCACCCACATCGTGTAGGTGTCCTGGAGCCGAAGAACCAGCAGGGCCAGACAGAGCACCGCACCGTGAGGGCAGCAGGCAGGGACTGCCTGTGAAAACACAGGGTCGGCTCGCAGTGCAGGGAAGTGCCCCATGGGGGCTCCTGGCTGGCTCCTCACATTTCTGGGGTCTCCTGTGCTGGTAACCCTCACTTCCCGAGTGAGGCAAGGCTGAGTGGTGGGCTCTCTGGCCACCTGGGCCCCAGGTCAAAGCACTGTCCCCTTGCTGAGCTGACCTGGACTCCTGGTGACACCCTCACACCTTCCCTGAGCCCGGTGCTCGGGGTCCCAGTGGCCTTCTCTGCCAGAACCATCGCCCGGGTCTTAACACATGCAACCCCACCTTAGCAGCATCTTACAGTAACCAAGACACTTTCATTTATATAGTATTCTCTGCACTGGTTCTGACGTCATCGTAGGGAAAAAGATGTGTTAAGATAGGATTACATGGGACTTATTTTCTTACTGTCTGTGATTATTCCATCTTCTTACGATCAGCATGTGTTTTATTAATTCGTTTCAAACGTGCAGTAACACGAGGAAGTGTATTACTGTTTCTTAGGAATATCCCGGGTTCCGCCTCACTGGTGCCTTGTCTCCTCATTGGCTGACCCAGGCCTCCCCCCGACATCCTCACCGCCCCCCAGGCCCTCACCTCTCCAGCACTGCGGGTTTCTCATCAGCGTGTAAAACATTCTCAAGTTTCTCCCACCTTGTCAAATATTGATGATCCGCTCGGTATGCGGGGATGCTCCAGTATCAGGAATCATTGGTGTGCAGTGTGATTCATGCCAGGGAGCAACCGTCTGTTTGGTAAACAGATAGCAGAGCCTGCTGAGAAGCATGAGCCCAGTCTTGCTAAGGAAATAAAATGTGTGTGTAGAGTGGACACTGAAAGACTGTTTGCCCGGTTACCGACGGTGGTTACCATGATGCCGTCCCCTGTAATTACATTTTATATTAAATTTCTGCGTTCATCACGATATAATTCATAACAA EMBV3_29935 TTGATACAACCAAGTCAGATGGGCAGTTTAAGAAGACGGCCAGTAATGCCAAGCTGCGGG Gene GeneID:513158|TSTA3:NM_001046139:80_cdna Constitutive 0 NULL GeneID:513158 14 GENE TSTA3 MGC137649 tissue specific transplantation antigen P35B EMBV3_35428 TGAGCTGGAAGAGATGCTCCAAGAAGTGGATCTCAATGGGGACGGCACCGTGGACTTTAA Gene GeneID:281656|CABP4:NM_174256:455_cdna Constitutive 0 NULL GeneID:281656 29 GENE CABP4 NULL calcium binding protein 4 EMBV3_16926 TCAAGAGGAGGCTGGAGAAAATGGACATGATGTTACGAGCTCAGTTTGGCCAGGACCCTT Gene GeneID:532668|ZNF821:NM_001038152:333_cdna Constitutive 1 NULL GeneID:532668 18 GENE ZNF821 MGC134567 zinc finger protein 821 EMBV3_34822 TTCCTCGTGCTAAAGGATAAACCTCTCAGCAGCATCAAAGCGGACATTGTCCACGCCTTC Gene GeneID:538009|BRSK1:XM_002695410:36_cdna Constitutive 0 NULL GeneID:538009 18 GENE BRSK1 NULL BR serine/threonine kinase 1 EMBV3_22230 CGAACTCTGCAGGTGGAACTAGAAGGGGCCCAGGTGATACGCAATCGGCTAGAAGAAGTT Gene GeneID:508547|PDE4DIP:NM_001101902:35_cdna Constitutive 0 NULL GeneID:508547 3 GENE PDE4DIP MGC143198 phosphodiesterase 4D interacting protein EMBV3_33617 GCTCAGTTGTGGTTGTACATTCCTGGTAAATGATGACTGTTGCCATCAAAAGGCTGCCCC Gene GeneID:505538|STX12:NM_001101053:78_cdna UTR3_Alt 2 NULL GeneID:505538 2 GENE STX12 NULL syntaxin 12 EMBV3_09337 AGTTACGACGGGAATTCAGGATGCCTCTTGTGTTGGCCCAGGCAAGTCCAATCTTCCATT Gene BVV0102_182851 + 0 NULL GK000009.2:44677440-45169673 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41788 GTAGATTTTGAAACAGTTTTCTCTTATGAAGTGGACGTCAAGGCCACCGATGGGGGCGGC Gene GeneID:518612|PCDHB13:XM_002689254:157_cdna UTR3_Alt 2 NULL GeneID:518612 7 GENE PCDHB13 NULL protocadherin beta 13 EMBV3_32287 TTATAACGATAAGGCAAGGGAGGGGTGGTGGAAACCCCCGATCTGGCCGATTTTCTACTG Gene BVV0102_296639 - 0 NULL GK000005.2:6274474-6429587 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08024 AGGGGAATTGGAACTGAAAGATGAGTCCACTGACACAGATGAGGAAATGACTGCGGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00658 CAAGATGACTTCTCACTTTGTGCTCTGCTGAGCTTTGTTGTTGAACCTCTACCTCAGGAG Gene GeneID:537280|SLC19A3:NM_001102198:142_cdna UTR3_Alt 2 NULL GeneID:537280 2 GENE SLC19A3 MGC165775 solute carrier family 19, member 3 EMBV3_09147 GAAGTTCAGGAAGGGGGGCGTTAAAGTGAACAAATCCACGAAGTCAATGATGCGGTCATT Gene BVT0102_090938 + 1 EMBV3_32262 GK000030.2:25445677-26730297 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249897 1 XLOC_152840 NonCoding TCONS_00249897 XLOC_152840 NonCoding NonCoding - X:26646915-26647543 - TSS187118 628 0.205414012738854 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000159814643068049 0 0 0 0 1.46083649621144e-05 0 0 0 0 0 0.000170065942422195 0 NM_182616.3 C15orf38 Homo sapiens chromosome 15 open reading frame 38 (C15orf38), 2e-06 57.2 83.33 0.0843949044585987 0 noncoding 0 0 0 0 -0.130732558577395 0.316356656394711 0.0200128152267161 0.741487909006481 GGTGAGGACACTAATGACCAGAGAAGCCAAATAACTTGCCCAGAGTTACCCAGCTAGTGAACAGCAGGTCCAGGATTCAAACCCAGGCAGACTGACGCTGAAGTAAGTGACCTGAACTCTTCTGTTCTACATTCTCTATGAAGGTTTTTGTGTGTCACATCGAGGAGTACGCACTGCAACCTGAAGTTCAGGAAGGGGGGCGTTAAAGTGAACAAATCCACGAAGTCAATGATGCGGTCATTTTTGTCTACAGAAGAGTAAGCCAAGTCAAGCAAATGGTTATTTTTAAGTGAATTGATAATTTGCATGAACTGAATCAAAATGGTCAAGTTGCTTGAGGAAACAGGCAGCTGCCCCTGGAAGCTGTGTACATTGCAAATTTTGCTGATCCACTCCCCTAATCCTTGAGAAAGTGTCCTTAAGGAACCCCAATTGTTTTAGATAAAGAACATTTGTCTGCTGCTTCCATGTATTTAGACCAGTATATATTTTTACACTTTTTCACAATGTATAATTCGAGTCTGAATAAGAAGTAGAAGAGTATGAATACCAATCTTTTTCATGACTGTAACAATACCTTGCCTATTCCGAAAAATACCTCCCAAGAGACCTGGCTTATACTTAACTC TCONS_00246617 TCONS_00246618 . 3' 81820 TCONS_00246617 TCONS_00246618 . 3' 82447 EMBV3_09254 CTCTGACAGGGTTAGGCAAGATTCCTGGTGTGAAGTGAGGCACAGGCACTTTCATTTAAT Gene BVT0102_206304 + 0 NULL GK000011.2:62299943-62301307 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028038 TCONS_00028046 TCONS_00028037 TCONS_00028045 TCONS_00028043 TCONS_00028049 TCONS_00028035 TCONS_00028036 TCONS_00028042 TCONS_00028041 TCONS_00028047 TCONS_00028048 TCONS_00028044 TCONS_00028039 TCONS_00028040 1 XLOC_015388 Coding TCONS_00028038 XLOC_015388 Coding Coding VPS54 11:62300263-62402959 j TSS19738 4511 1 TCONS_00028038_5 874 23 0.956297774964701 3.20393813228552e-37 5.46951809418859e-105 1.65617829861677e-05 9.47427261080487e-36 4.24920300499025e-118 2.84133592451742e-67 7.85814482788715e-129 1.58020060850063e-67 5.54427191090701e-53 2.65242819395094e-06 7.50949145273895e-26 1.71144218741206e-16 8.07951457325366e-37 6.54524971494374e-38 5.73127018032052e-116 0.000910694052825673 1.60586972246275e-35 0.00150778459653663 6.77288148790209e-26 3.69157685386619e-140 3.35161952155186e-123 6.86345295840622e-82 0.000439085509326494 0.000385835323792423 2.83560872977969e-58 4.42954817958667e-61 1.28648040938149e-72 3.94983726407527e-08 5.76373888681552e-31 4.60733202047487e-27 XM_005212813.1 VPS54 PREDICTED: Bos taurus vacuolar protein sorting 54 homolog (S. cerevisiae) (VPS54), transcript variant X4, mRNA. 0.0 7203 100.00 0.88516958545777 NM_016516.2 VPS54 Homo sapiens vacuolar protein sorting 54 homolog (S. cerevisiae) (VPS54), transcript variant 1, mRNA. 0.0 5214 92.84 0.776989581024163 TCONS_00028038_5 sp|Q9P1Q0|VPS54_HUMAN VPS54_HUMAN Vacuolar protein sorting-associated protein 54; 0.0 1707 96.08 0.991990846681922 2 coding 0 0 0 0 -0.0206035741962362 0.889226870026883 0.014923072427749 0.74935765985867 GTGCTCCCCCGGCCGACGGGCCAGCCGGCGCGGGGCGGGGGCGGGAAGCCGGGCTCGGGCCCAGCCGGGCTCCGGGCGGCGGCGGCCGCGGAGCAGCAGCCTCGGCGCGACGTGGAGGCTTGGAGGCGGCGGCGATGCACTAGGCCTCGCTCTAGGGCGGCTGCCCGGGACCCGCAGTTGAGTGGTGATTTTATGCAATGGCTTCAAGCCACAGTTCTTCACCAGTGCCTCAAGGAAGCAGCAGTGATGTTTTCTTTAAAAAAGAGGTAGACCCGACAAAACACATTCGACCTGTGCAGTCACTGCCAGATGTGTGTCCCAAGGAACCCACAGATCAGCAAGGAACATTTTACAGTGTATCAACAGGAAATCTCTCAGAGAGAAAAGATTCATGAGAGATGCAAGAATATTTGTCCTCCTAAAGATACCTTTGACAGAACTCTCTTACATACTCATGATAAATCCAGGACAGATCTGGAGCAAGTACCTAAGATTTTTATGAAACCAGATTTTGCCTTGGACGATTCCTTAACTTTTAATTCAGTTTTACCATGGTCTCATTTTAATACTGCTGGTGGAAAAGGAAATCGTGATGCAGCTTCCTCAAAGTTGCTGCAAGAAAAGCTGAGCCATTATCTGGATATTGTGGAAGTAAACATTGCTCACCAGATCTCTTTACGTTCAGAAGCATTTTTTCATGCAATGACCTCTCAACACGAATTGCAGGACTACCTCAAGAAAACTTCCCAGGCTGTAAAAATGCTTCGAGATAAAATTGCACAGATTGATAAAGTAATGTGTGAAGGATCACTACACATTTTAAGACTGGCACTTACCAGAAATAATTGTGTTAAAGTATACAATAAACTGAAGTTAATGGCCACTGTACACCAGACTCAGCCTACAGTACAGGTGTTGTTATCTACTTCTGAATTTGTTGGAGCATTGGACTTAATAGCAACAACACAAGAGGTTCTACAGCAAGAACTTCAGGGCATTCATAGCTTCCGGCATTTGGGATCACAGCTTTGTGAATTAGAAAAACTGATAGATAAAATGATGATTGCAGAATTTTCTACTTATTCTCACAGTGACTTAAATAGACCATTGGAAGATGACTGTCACATTTTAGAAGAGGAAAGACTAATCTCTCTTGTATTTGGACTTTTAAAACAAAGAAAACTTAATTTTTTAGAAATATATAGTGAAGAAATGATTATTACAGCAAAGAATATCATTAAACAGTGTGTGATTAATAAAGTTTCGCAAATAGAAGATATAGACACAGATGTTGTTTTGAAGCTTGCAGATCAGATGAGAATGTTGAATTTTCCTCAGTGGTTTGATTTACTAACGGATATTTTCTCCAAGTTTACAATTTTCCTACAGAGAGTTAAGGCAACCTTAAATATCATTCATAGTGTTGTTCTCTCAGTTCTTGACAAAAACCAAAGGACTAGAGAATTGGAAGAGATTTCACAACAGAAAAATGCTGCAAAAGATAATTCACTAGACACAGAAGTGGCTTATTTAATCCATGAAGGCATGTTTATAAGTGATGCATTCAGTGAGAGTGAATTAACACCTATAGCCATAGATACTACCTCTCAGAGAAATGCATCTCCAAATAGTGAGCCCTGCAGCAGTGATTCTGTATCCGAACCAGAATGTACTACTGATTCTTCATCCAGCAAAGAGCAGATATCATCATCTGTTACTCCAGGAGCTGTGGATATTATGGTCAATGAAGATGTGAAATTAAGTGACTTAGAGCTAGGAAAGCTGGCAAATAATATCCAGGAGTTATTATATAGTGCCTCAGATATATGCCATGATCGAGCCGTCAAATTTCTCATGTCAAGAGCAAAGGATGGTTTTCTTGAGAAGCTAAATTCTACAGAATTCATATCACTTTCCAGATTAATGGAAACATTCATTTTAGAAACTGAACAGATATGTGGAAGAAAAAGCATGTCATTACTTGGAGCACTTCAGAGCCAAGCAAATAAATTTGTAAATAGGTTTCATGAAGAGAGAAAAACCAAACTCAGCCTTCTCTTAGACAATGAACGCTGGAAGCAAGCTGATGTTCCTGCAGAATTTCAGGATCTTGTTGATTCTATATCACATGGAAAGATTGCTTTACCTGAAAAAAAATCAGGGGCTACAGAAGAAAGAAAACCAGCTGAAGTTCTTACTGTTGAGGGGCAACAGTATGCTGTTGTTGGAACTGTATTGCTGTTGATAAGAATTATCCTTGAATATTGCCAGTGTGTGGATAATATCCCATCTGTTACTACTGACATGCTCACTCGTCTATCAGACTTATTGAAGTACTTCAATTCAAGAAGTTGCCAGTTAGTTCTTGGAGCTGGTGCACTGCAAGTTGTTGGACTAAAAACAATAACTACAAAAAATTTGGCTCTTTCTTCACGCTGTTTGCAGTTAATTGTGCACTACATTCCTGTGATCCGGGCTCATTTTGAAGCTCGACTGCAACCTAAGCAATACAGTATGCTTAGGCATTTTGATCATATCACTAAGGACTACCATGACCACATAGCTGAAATATCAGCTAAGCTTGTAGCGATAATGGATAGCTTATTTGACAAGCTGTTATCTAAGTATGAAGTGAAAGCTCCCGTTCCTTCTGCCTGTTTCAGGAATATTTGTAAGCAAATGGCAAAAATGCATGAAGCTATATTTGATCTCCTTCCTGAAGAACAAACGCAAATGTTATTTTTAAGAATTAATGCAAGTTACAAACTCCACTTGAAAAAGCAGTTATCTCACTTAAATGTGATAAATGATGGAGGACCTCAAAATGGGTTGGTCACAGCAGATGTAGCTTTTTACACTGGAAATCTTCAAGCCTTAAAAGGCCTTCAAGATTTGGACCTAAATATGGCCGAGATCTGGGAACAGAAAAGGTGATGACATACTGGAAAACTGGGTAGTTCATCTGACCAGGGGATGTGTGTTTATGATGGAAATATGGACGCCTGTGACTCAAGAACTGAATATGGAGCCCACAGTGAACCGGGATTGGGGAAGGGGAAAAGGAGTGTGTCAGTGTTGGGAAACTGGGATTCAATGGGATCTACAAGGAATGCCATTTGTGTGCTTCCTTCAGTGAGGAGTAACTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGTTGACTAGAATGCTCTGTATACTTTATATTAAAAGATGCTTTGCATTTCTTCCAGTGCAATGAAATTCATATGGTGTCCCACTTTATTTAATGATGGTACAATTTAAAATATTAAAATCTTACTCAACCTCTGTAGAAAGTTTTCTCTATGAAAGTAAAGCTGTTTGAAAAATTATTTTTTTACAGATCTTTCTATAAAAAATAAACATCTTTTGATTGCTTGGATTTAGGAATTCAGTTTTTGTTTTAGTGACCAATGTTTCAGGCTTTGTGTGTTGCAAATTTAATCTTTTTATCACCGCTGTATGTCAACTGCATAAAGCCTTCCAGAATAGTCTAAATACTTGAAAGGCTGATCACAAGTAATAATTAAAGAGTAAGATTTTGGTGTTTATTTATGCAACTATTAATTTAAATACTTATCAGATGTGGTATATGAAAGCCTGCAGTTTAACAGCTGTATTTTTATAAAAGTATCTATGAAGGGTTGGGGTGTTTATTTCCTTTTTATTTTTAGGGGCAAGAATACATTTTCATCTATTCTGCCTAATTTTGAGTTCTCGTTTTAACATTTAGATAACGTTGAAGTATGCCCCCTGCCTTGGGTTCTTGTTTGTAAGTTACTTTCCGTGTGTATATGAACAAAGACCAGGGATAGATAGAACTTTTAAAATATAGGCTGCTGTGTTCGGGCCAGAAATATAAGGTGATGAGTAAATTATTTAAATTAAAGACTTTTATAATACCTACCTTCAAAATTAGAATTAAATGAAAGTGCCTGTGCCTCACTTCACACCAGGAATCTTGCCTAACCCTGTCAGAGTGCCTAACCTTGTGGTGATTATGTACAATGAAATAGTCTTACTTTGTGCTCTTTGGTTTCCTAAAAGGAAAGCCTGTTTTCTTTCCTTTATCCTTATTACAGAGGTATGTCATTGGTTCTTAAACTGTCTGTCTAAAATAAAGCTGTAAAAAATTATCAGACTTTAAAAGACAACTTTTTTTAATAGTATACAGTAAATTTTAAAGAAAATAAGCAGCTTACTCAAAAACAAGCATGGAAGAACTGAAAAATGTAATTGATTCTTAGAGAAAAGCTAAAATTCAAACTACCAGCAGAGCTGGATTTGGAAGGTTATTCAAGAACATTTTCAGTGACAACAAAGCAGCTTCAAGAAATGAAGCTTCAAGGAAAGGGAACTTTTTATAAAGTTATACCCTCACCCTGCTATACTAGAGAACAAGGATGTGAAAGAAATGTACTACCTC EMBV3_36470 GGCGTGCTTGGACCACAGAGAAGTGAGCTGCAGGTATTCGGTAAGGTTAGCCTAGTGTTT Gene GeneID:541234|MYO5A:XM_002690962:336_cdna UTR3_Alt 2 NULL GeneID:541234 10 GENE MYO5A NULL myosin VA (heavy chain 12, myoxin) EMBV3_23394 AAGTGTTTTTCAATGTCTGGGTAGGGATGAGGGGCTCGGTGCTTGTCCCTAACACGTTTG Gene GeneID:515105|TP73:XM_002694119:457_cdna Constitutive 0 NULL GeneID:515105 16 GENE TP73 NULL tumor protein p73 EMBV3_04171 TTGAGGAGGCGCTATGCTTCATTTCCGGTTCCTTCTGGTTACCAGTTTTCCCTTGAGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08340 AGGTAGAGATGGTGCTAGAAGAGTATGAGGTCTACAGCCCCATGCCCCTCCTTGTGAGCA Gene GeneID:514056|ITGAD:NM_001102496:323_cdna Constitutive 0 NULL GeneID:514056 25 GENE ITGAD CD11d MGC152447 integrin, alpha D EMBV3_43331 ACTGTACTACCCGACCGTCAGCACTATCAGCTTGGGCTCTCACACCATGCTGGACCTCTA Gene GeneID:539257|ALKBH6:XM_002694944:60_cdna Constitutive 0 NULL GeneID:539257 18 GENE ALKBH6 NULL alkB, alkylation repair homolog 6 (E. coli) EMBV3_41818 GAGCAACAGTATAACAGACTTGTGGACTACATCACAAAGACCTCTTGTCACCTGGGCCCC Gene GeneID:512656|VPS13B:XM_002692790:74_cdna Constitutive 0 NULL GeneID:512656 14 GENE VPS13B NULL vacuolar protein sorting 13 homolog B (yeast) EMBV3_14887 TCACTGCTGAGGTGCTGGAGCTGGCAGGTAATGCATCCAAGGATCTCAAAGTTAAGCGGA Gene GeneID:613618|H2AFV:NM_001038197:55_cdna Constitutive 1 NULL GeneID:613618 4 GENE H2AFV MGC133654 H2A histone family, member V EMBV3_08114 GCGCCTTTAGATTTGCAGTCAGGTTGATGGAAACAAATAGCCCCAGGTCATTCACCTTAA Gene GeneID:519018|SKP2:NM_001102052:27_cdna Constitutive 3 NULL GeneID:519018 20 GENE SKP2 MGC152600 S-phase kinase-associated protein 2 (p45) EMBV3_26552 CCACTCCTAGAGATGATTTCTCCCATTTTTGCACCTGGTCACAGAAGTGCCTGGCATCTG Gene GeneID:514186|SYNM:XM_002696502:82_cdna Constitutive 0 NULL GeneID:514186 21 GENE SYNM DMN synemin, intermediate filament protein EMBV3_39245 ATGCAGGTTCCTTCAGTCCTGCTCAAGGCCAAATAGGAGGAGCAGTGAAATTATCTCTCT Gene GeneID:537790|PIK3C2A:XM_002693094:462_cdna Constitutive 0 NULL GeneID:537790 15 GENE PIK3C2A NULL phosphoinositide-3-kinase, class 2, alpha polypeptide EMBV3_03073 GGACGACGGCCTATGTCCAGCAAGCTGTCAAAGGAGACAAGCTTCTTGAAGGGCAAGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01783 TCACCATCCTGTGTGACAAGTTCTCTGGACACCCCAAGGGCTATGCCTACATAGAGTTTG Gene GeneID:516682|LOC516682:XM_002707779:87_cdna Constitutive 0 NULL GeneID:516682 22 GENE LOC516682 NULL similar to poly(A)binding protein nuclear-like 1 EMBV3_23400 GGAACTCCAGCTTGGATCAGGACATGGAGGCACAAGGGCCAGTCACCACAGGTCCAATGA Gene BVT0102_023263 + 0 NULL GK000022.2:51175294-51187153 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128995 TCONS_00128996 TCONS_00127191 TCONS_00128994 TCONS_00128997 2 XLOC_077994 XLOC_077596 Coding TCONS_00128996 XLOC_077994 Coding Coding DAG1 22:51184308-51207341 j TSS96048 4603 1 TCONS_00128996_4 518 4 0.800321292115318 0.0044843102597659 0.00223376143757423 0.00121881797132823 0.00220021500139089 0.00210755022586869 0.000813042520789586 0.000937571547940414 0.00160496735983202 0.00137522693195384 8.71730326207819e-05 0.000184849431451386 7.32104055327533e-05 0.00081964598486319 0.000739359740595867 0.000992743356745615 0.00548712821034034 0.00574144404229376 0.00394104688322875 0.00229515807382359 0.00410321857807971 0.00044746656720652 0.00319440226269681 0.00216410767228974 0.00394539936114387 0.00310442245309278 0.00358395310559545 0.00169449414800642 0.000605148220620256 1.32949538485938e-18 1.46977375269169e-35 XM_005222703.1 DAG1 PREDICTED: Bos taurus dystroglycan 1 (dystrophin-associated glycoprotein 1) (DAG1), transcript variant X1, mRNA. 0.0 4213 100.00 0.507277862263741 NM_001177642.2 DAG1 Homo sapiens dystroglycan 1 (dystrophin-associated glycoprotein 1) (DAG1), transcript variant 11, mRNA. 0.0 2783 86.81 0.507712361503367 TCONS_00128996_4 sp|O18738|DAG1_BOVIN DAG1_BOVIN Dystroglycan; 0.0 959 98.57 0.942084942084942 0 coding 1 1 1 1 0.0308977151762273 0.797119348735134 -0.0247144703941604 0.636440004756398 TCGCGCGGAGGCTGCGGTGCGGCGCTCGCGCTCCTGGGGCTCGGCGGCGGCGGCGGCGGCGGCGGAGGCGGGAGCTTCGCGCCGAGTCCCCGGGAGCAGCGGCAGCGGCAGCGTGTCGCGGCCGGAAAGAGTGAGCACCTGCCGCGGCCCGCCCGGCGGCGCTCGATGAGTGCGCCGCCCGTGCACTGCCGCCGAGCCTGCCAGCCCAGGCCCCCCATCTCCGTCGCCGGCGGAGCCTCCCGAGGAACACCTGCTGCTGCTCGCTATTTGGCCCGGGGCGGGGACACGGTCGCGGACGTCCTTGCGGGCTCTGGGTGCTCTGGGATGGAGCAGGTGTGCAGAGGGTGAGGACCCAGTCCTGGGACCACGTTGCTTGCTTCTTTTCTTGGAGAGACTTATCTGCCTGAACAGACTTGAACCGGGGATGAGGATGTCTGTGGGCTCGTCGCTGCCGCTTCCCCTCTGGGGGAGGACCTTTCTCCTTCTGTTGTCTGTGGCCGTGACTCAGTCCCACTGGCCCAGTGAACCTTCGGAGGCCGTCAGGGACTGGGAGAACCAGCTCGAGGCGTCCATGCACTCAGCACTCTCAGACCTCCACGAGACTGTTCCCACCGTGGTTGGCATTCCTGATGGCACGGCTGTCGTCGGACGCTCATTTCGAGTGACCATTCCAACAGATTTAATTGCTTCCAATGGAGAAGTCATCAAGGTATCAGCCGCGGGGAAGGAGGCCTTACCATCCTGGCTGCACTGGGACCCGCAGAGCCACACCCTGGAGGGTCTCCCCCTTGACACCGATAAGGGGGTGCATTACATTTCAGTCAGCGCTGCACGACTGGGGGCCAATGGGAGCCACGTCCCCCAGACTTCCAGCGTGTTCTCTATCGAGGTGTACCCTGAAGACCACAGCGAGCCGCAGTCGCTGCGGGCGGCCTCACCGGACCCCGGCGAGGTGGTGTCCTTGGTCTGTGCTGCTGATGAGCCTGTGACCGTCCTGACAGTCATTCTGGACGCTGACCTCACCAAGATGACCCCAAAGCAAAGGATCGACCTGCTGCGCCGGATGCGGGGCTTCTCTGAAGTTGAGCCGCACAACATGAAGCTGGTACCCGTGGTGAACAACAGACTGTTTGACATGTCGGCTTTCATGGCAGGCCCAGGCAATGCAAAGAAGGTGGTGGAGAACGGGGCCCTGCTCTCCTGGAAGCTGGGCTGCGCCCTGAACCAGAACAGTGTGCCTGACATTCGTGGTGTGGAGGTCCCCGCCAGGGAGGGCGCCATGTCTGCGCAGCTCGGCTACCCTGTGGTGGGCTGGCACATCGCCAACAAGAAACCCTCTCTGCCCAAACGCATCCGGAGGCAGATCCATGCCACGCCCACGCCTGTCACGGCCATTGGGCCCCCCACCACGGCCATCCAGGAGCCACCGTCCAGAATTGTGCCCACCCCCACGTCTCCAGCCATTGCTCCTCCAACCGAGACCATGGCTCCTCCGGTCAGGGACCCTGTTCCCGGGAAGCCCACAGTCACCATTCGGACTCGAGGTGCCATTATTCAGACCCCAACCCTTGGCCCCATCCAGCCCACTCGGGTGTCAGAAGCTGGCACCACAGTTCCCAGCCAGATCCGCCCAACAATGACCATTCCTGGTTACATGGAGCCCACAGCAGTCATCACCCCTCCTACGACGACCACCAAGAAGCCACGAGTGTCCACGCCCAGACCAGCCACACCTTCTACTGACTCCTCTACCACCACTACTCGAAGGCCAACCAAGAAGCCGCGGACATCCCGACCGGTGCCCCGGGTCACCACCAAGGCACCCATCACCAGACTGGAAACCGCCTCCCCGCCGACACGCATGCGCACCACCACCAGCGGGGTACCCCACACACGGGGCCTGGACAAGCCCGCCCTCTCCGGTCCTCCTAAACCCCAAAGCCGCTGGAGAGACTTTGGGGACATTTTTTTTTCCTTTTAATTTTTGCCTAACAGCTTCTTGTTTGTTCATAGAAAATCCTTCGCTGCGTTTTTTGAAGGCTGGCTGGCTCTGAAAGCACCGTTTGGAGTAGAGGTAGATGGAGGGAGCGAGGAACCGTGAATGAACTCGCAGGCAGTGCTGGGCAGCCTCCCGGCGGCTCTCTGCGTTTTGCCTTTAACACTAACTGTACTGTTTTTTTCTATTCACGTGTGTCTAGCTGCAGGATGTAACATGGAAAACAGTAGCTAAAGATTAAATTCAAAGGACTTTCAGACGTTAAGGTTAAGTTTTTACATTTAATCTGCTGTTTACCTAAACTTGTATGTATCATTTGGGGGTGGGTATGGGAAATTGCTTTGCTAAAAATAAGCTCCCAGGGTGTTTCAAACTTAGAGAAGACCAAGGGACAGTATTTTTTATCAAAGGAATCCTATTTTTTCACACTACGTAAACTTGGTTGCTCTGATACCCCGGAGAGCCCGCCTGGGGGCCTCCTGGCCCTGGCTCAGGGGCCAGGGCCCTGGTGCTGGGCTTGCTGTCCCACCGTTGCCAGGGGCTGGAAGCTGGAGGGGGCCTCTTAGGCCAAGGACATCCACACCCCCCACCCCATGCACGCTAGTGGCCCACCACCAAGGGGTCTTCATTTCCATGGAAAGGGGACTCCGAGAGGCGGCGGTGGCCGTGGCCCCCAACCTAGGTGCTCCAGGGTGGGCCAGCTGCTCGTGGGGACGGCTGGGGAGGTCGAGGAACTCGACCACATCAATCTGTTTTCTTTTATCCTTCTTCTGTGTGTGTTTTTTTTTCTCCCCCCATCCCCACCCGCCCCAAGGAATATCATGGTTTCTGAAACACTCAGTGGGGGACATTTTGGTGAAGATGCAATATTTTTATGTCATGTGATGCTCTTTCCTCACTTGACCCTGGCCACTTTGTCCCAATAGTCCACAGCCCCACCCTGACCCACGTCACCCCTCTTCTCTGGCGCTCCAGTCCCAGGCCTCGGGCCTGAACAGCTGGGCAAGGTCTGGTGGCTGGGGAGGAGTGCCAGCAATAGTTCATAGTAAAAAAATCTGTGGGCTCTCAAAGCTAATTTTTTACTAAAGTTTTTATACAGCCTCAAATTGTTTTATTAAAAAAAAAGATTAAAAACGGTGATGCTTAACAGCAGTTTGTACAAGCTCTTAGTGTTGATTCCATGGGACTGACAGCTTTGCTCATTTTGATTTTTTCCCCCCCTTCTTTTCCTAATGGTTTAAATTCCAGAATTACACTGGGGCTCCTTTTGCCTTTTTTAGCAGAACGTCCGTCCATCCATCCGCATCTCTGTCCCGTGACTCAGGGGCACCCACTCAGCTTTGATTCTCCTCCTTTGGAAGAAACTGTTTTGAGCAGGACTTCTTGATGTCTGAGAGTTATTTTGGGTACCTTTTAGGGAGGAATGCCTTTTGCAATAATGTGTCCCTTCTGTGATCAAGGGCAGGTGGGTGGACCCAGGCTCCCTGTGCACATCAAGCAGCCACTTCTAAGCCATATTGACCGTTTTGCAGAGGATTCGCGTGTGCTGCCTCAGGACGGGAGGGATGGTCAGAGTGGAGGGGTCTTCACCCTGCCCTTCTCTGGAGGGTGTTCCCCTTTGCACCTCCTCCAACAGGGCCCAGCCTCTTTCTCCTGCCTGGCCCGCCGGTGGGGTGAGCGGTGCCCCTGGTGGCTGGAGCCTGTAGTGAGGGCTCATTGGACCTGTGGTGACTGGCCCTTGTGCCTCCATGTCCTGATCCAAGCTGGAGTTCCCCCAGTGCCCCAGAGTCAGGAGCACAAGCTGGATCTGACCTGGTGGGATGATTTTTTTTTGATGACCTCGCCAAAAAATAAACAATTTCCAGTGTTCCAGGTGAGGGCTTTGAAAGGCCTTCCAAATAAGCTCCGTTGCCCCTAGCAACCCCACCATTGGGCATTGCCACGCAGAGACGTGGCTGGCCCAGAATGGCCTGTTGCCATGGCAACAGGAGGCAGTGGGGCAGTGAACAGAATAACAACAGCAACAATGCCCTTGCAGGCAGCCTCCTCCCCTGAGCGCCTGGCTGGCTATGGTCTTTGGACTCTGTGAGACAGAGAGCCAATCTCACATTCAAGTGTTCACCAACCACTGACGTGTTTTTATTTCCTTCTATATGATTTTAAGATGTGTTTTCTGCATTCTGTATAGAAACATATCGAACTAAATAAAAGCAGTGTCTTTATTACAATGCCGTTGCCTCCAAGCATCTATTTCCCTGGCCCCTACACGACTTGAGTGTAGGGTGGGACTGGAGTCCATGTGGCAGAGGCAAAGAGGGGGCCCGGCTAGGCCCACTCCGAGGTGGCCTTTGAGCAGCTGTCCAGATAGCCTTCACATCCTTACCATTTCTGTGCTTCTGAGAGGGGTGGTGGTTGGCACTGGGAGTTTTGGCAACCAGTGAGCCCTCCCTAGCACCTCCTCTGCCTAAACCAGCGGAGACATAGCTTGTGCATCAGTTTCCTCATCTGTAGTTGGGTGGGGGGAAGAATAGGCAGGAAAACCCAGTGAGACTGGGTGGGAGGGGAGGATGGTGCAAGAGGTCTTATAGAGGAGGTCTGCCCCAGAGT EMBV3_32263 AGCTCAATAGAACATTTACACAGATACTTGGCCATTTACACATATGTTCTTCTGTATGTC Gene BVV0102_351093 - 1 EMBV3_26415 GK000018.2:60281431-60286462 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41593 TGACAAACTGGTGAAAGAGTACACCCAACTCAAGCAGGCGACTGAGAACAAACGCTGGAC Gene GeneID:614307|HAUS4:XM_002690510:496_cdna Constitutive 0 NULL GeneID:614307 10 GENE HAUS4 NULL HAUS augmin-like complex, subunit 4 EMBV3_27392 GCAGACACCAAGGTCGCCCGGCGCTATGGGGATTTCTTCATTCGGCAGATTCACAAATTT Gene GeneID:514449|EIF3L:NM_001035296:67_cdna Constitutive 0 NULL GeneID:514449 5 GENE EIF3L EIF3EIP EIF3S6IP MGC126953 eukaryotic translation initiation factor 3, subunit L EMBV3_29757 CCTTTGGTAGTGAAAGAACCCCCCTATCTTAAAGCCACAAAGTGAAATAGCATCAAAGAG Gene BVT0102_096233 + 0 NULL GK000012.2:52461658-52466036 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20448 AAAGAAATTCCATTTAATAGGCTCCCCTGGTGGCTCAGTGGTGAATCCGCCCGCCAGTGC Gene BVT0102_113094 - 1 EMBV3_02729 GK000021.2:45340794-45354859 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27219 GATAAGGGACAACAGTATCTCAAAATAAGACAGGATCCTATGGCAAAAGCCACAGGCCTG Gene BVV0102_249566 + 0 NULL GK000002.2:50197449-50555941 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24333 TCAGACAGAACCCTGTCGAACAACATCACAGTTCCCAAGATAGAGCGCGCCAACAGCTAC Gene GeneID:100337068|LOC100337068:XM_002689643:1_cdna Constitutive 0 NULL GeneID:100337068 8 GENE LOC100337068 NULL transient receptor potential cation channel, subfamily M, member 3-like EMBV3_23577 CTTTTCGAGAGGAGAATAGAGAAGCCACAATGACGTCTATCACTCAGCAAGAAGCACTTG Gene GeneID:100336592|LOC100336592:XM_002685182:51_cdna Constitutive 0 NULL GeneID:100336592 1 GENE LOC100336592 NULL mCG140660-like EMBV3_04156 GCTTCATTGCCATCCTAGTGGTTGTGGTGATTGTCCTGGTCAGTGTGGTCAGTCTAAGGT Gene GeneID:511765|ECSCR:NM_001046099:226_cdna Constitutive 0 NULL GeneID:511765 7 GENE ECSCR ECSM2 MGC137169 endothelial cell-specific chemotaxis regulator EMBV3_31515 CTGTCAGGGTTTTCTGGGCTCACTCTTCCACTGACTTATGATCTATGCCTAACAGAGCCC Gene GeneID:539790|POGK:NM_001099100:35_cdna UTR3_Alt 2 NULL GeneID:539790 3 GENE POGK MGC151637 pogo transposable element with KRAB domain EMBV3_02120 AAACTAACCAAGAAAGGCTGGAAAACTACTGAAAAACTGATCAAGCTGGACTTGCGCATT Gene GeneID:616885|FGF7:XM_002690932:251_cdna Constitutive 0 NULL GeneID:616885 10 GENE FGF7 NULL fibroblast growth factor 7 (keratinocyte growth factor) EMBV3_21528 GCAGAATGGATTGAGCTTCACCAATACCTGTCACCGGCAGTCACGGACCCTTTGAAACGA Gene BVT0102_153152 + 0 NULL GK000003.2:27514126-27593571 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172685 TCONS_00172686 1 XLOC_104193 NonCoding TCONS_00172686 XLOC_104193 NonCoding NonCoding - 3:27555940-27558149 - TSS128560 647 1 TCONS_00172686_1 33 0.262751159196291 3 0.708333333333333 6.30865617126219e-05 0 0.000257453100486464 0 0 0 0 0 2.43899685312522e-05 1.27186831817269e-05 0 0 0 0 0.000151659904345995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XR_227801.1 LOC101905912 PREDICTED: Bos taurus uncharacterized LOC101905912 (LOC101905912), 2e-06 57.2 83.93 0.0834621329211747 NR_024431.2 ZMIZ1-AS1 Homo sapiens ZMIZ1 antisense RNA 1 (ZMIZ1-AS1), transcript variant 8e-13 78.8 77.98 0.162287480680062 0 noncoding 0 0 0 1 -0.455371924224156 0.133565670576155 -0.0301865796578691 0.561259810022948 AGAGACACACAGGGAAGGTGACATGAACATGAAGCAGGGAGAAATGTGGCCACTAGCTGAGGAATGCTGACAGCCCCCAGAAGCTGAAAAGCAAGGAATGGACTCCCCGCTAGAGACTTGGGAAAGAGGGCAGCCTGCTGACACCTTGACCTCAAACTTTTGGTCTCCAGAACTGTTTTACACTGCCGATCTGAAATGAAATTGCAGCCTTCCATAATGAGCAAGTGAGGCTCAGAGGCAGAATGGATTGAGCTTCACCAATACCTGTCACCGGCAGTCACGGACCCTTTGAAACGACAAATGGCAGAGCCTCTAATAAAAGGCCAGCTGGGACTACACACCGGGAGGGTTAAGCAACCACAGGATTAATTGAAACTCTGCTGCCATTGCTCTGGTCAAGATGGTACTTGGACCCTGGCTGTTCCCAGTCACAACATCTGCTCAGTGGTTTCAAATTACTTGTGGACGCCAACCATGACTGACAAGAGAAAATTTTAAATGTTCTAATCAAAGACCTCTTCTTACTCCTATTAATATCACAAGTTGTAGCCTTCTTTCCCCTTGCCCACTACAGGCCAGCAGATATAGAAAGTTCCAGAACAGGTGAAATTGATTAGAATGCAAGGTGATTTTGGAATGAAAACTAG TCONS_00169264 r 5' 37294 TCONS_00169264 r 5' 35423 EMBV3_33270 CTCACCAGAGTCCTGTGGGTAATGCTGCTGTGTCCTCAGTTGACTCATTCTCTCTGTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40796 GCCCGTAGTCTCCAGAAACTAGGATTTCAGGACCCAATGTAAAGGCTGTTGCTACTGCTG Variant GeneID:613818|TBPL1:NM_001076290:8_cdna 456^654 2 EMBV3_34020 GeneID:613818 9 GENE TBPL1 MGC134257 TBP-like 1 EMBV3_01721 TCCCGCACCAGTCGTGGGCGTCCTGGTCAGATTTTTACTACCCTTGGATGCACTCCTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25581 TCTGAATACTAAGGAGGGCTACAGCTCCATGAACATCAGAGGATCCCAGCCTGAAGACTC Gene GeneID:100336799|LOC100336799:XM_002690552:120_cdna Constitutive 0 NULL GeneID:100336799 10 GENE LOC100336799 NULL hypothetical protein LOC100336799 EMBV3_31615 AGAGACAGGGTCCAAATAAGAGGAATAGAATGATAAGTACCAGCGGTCCCAGGAGGGAGC Gene BVV0102_224350 + 0 NULL GK000022.2:55774348-55885709 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31588 GGAAGGGTACGAGGTCCCGGAGCACGGCGTGGGCTGGGTGCCACATCCTCTGTGGACACC Gene BVT0102_436773 - 1 EMBV3_36629 GK000021.2:71167981-71186920 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125728 1 XLOC_077270 NonCoding TCONS_00125728 XLOC_077270 NonCoding NonCoding - 21:71184944-71186076 - TSS94487 1132 2 TCONS_00125728_3 98 1 0 0 0 0 0 0 3.15994318226573e-06 0 0 0 0.000156292735899673 6.06672824592775e-06 0.000219532066519232 5.06938832581738e-06 0.000403080374413269 4.76750995964415e-05 0.00041997196430865 0 0 0 0 0 0.0017502809724081 0.000316068087223162 0.000118478042331942 0 0 0 0.000144247642541441 8.57704314585516e-05 8.49787094804806e-05 XM_005222337.1 BRF1 PREDICTED: Bos taurus BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit (BRF1), transcript variant X1, 0.0 2039 100.00 0.997349823321555 0 noncoding 0 0 0 0 0.0809973501084677 0.591460280160832 0.0089978503386656 0.892406975111625 GCTTGCGACTCCAAAGGCAGCCTTTATTGCGCAGGGAGCAGCGTCCCCAGGGTCTGTGCTGGGCCCCACCTGGGGCCTGGGAGGCGGAAGCAGGACACTGGCCTGGCAGCCTGAGGGTGCCCGGGCGGAGGTGGCCATGGGGCTGGGCCCCTTGAGGCAGGGTGGGTAAGTCCGCCCCCCGGTGACCTGGGGCCTTCAGGGCAGCCCCAGCCTGGGGACGGGGAACTTCCTTGCCCTCCCGGGGCCCCCTCAGCCCAGAAGGGACAGGAGTCCCTCTCCCGGTCCCAGACTCGTGGCCCTCACTTGGCCAGCGCTCCAGCCCGCCAAGGAACAGATGGAGGACCAGGGTGTGGAGACAGCAGAGGGGTTCAGGGAGGGCGAGCGCTGAACAGAAGGAGGGCATCGGCCTGGGGCGGGAAGACAGGGAGGGTTGGTCTGCACCTCGCCCAGTGCTGAGCCGTGGGAGCAGCATTTGTGGGGCTGCCAGTGGGCAGGGCACAGTGGGCGCTCAGGCTGGGCTCTACCAGAGAGGGTGTCAGGGACCCTGGTTCTCAGGGGCCCCCCAGAAGCCGCCCCTCCTTCAGAGAGACCCCCCAGCGCCAGCAGGGGCCATGGTGGCAGAAGGCAGCCACCAGCCCTACTGCCCGTCTGGAGGCCTGGCCCAGCTGGACATGACTGTGGGAGCCAGGAGAGCGTGGGGAGCCACTGGGAGAGGGGCAGGAATGCAGGCCGGGGCCCGGACAAGCTGGCTCAGGATGGGGCTCCTTGCCACCTGCAGGCACTGGGGGCGTCTCAGGCCTTTTCCCCCTTCTTGGGGGGCCTGAGGCAGCGAGTGGCATGACGCCATGGCCCATCCAGTCCCGCCAGGAAGGGCGCCCATGGTCCCGACTCCGTGGACCAGAGGGGCGGGAAGGGTACGAGGTCCCGGAGCACGGCGTGGGCTGGGTGCCACATCCTCTGTGGACACCCCGCGGCACCTCCAGGCCTCGGGCCCCTGAGCTCAGCCCCGCTGGGGGCAGACCTGGGTCTCGTCAGAGCCCGGGATCCGGTGCCCTGATGGTGCCCCAGGGACCCGGGTGGAGCAGCGTGAGCAGCAGTGGCGTGTCCGTGCACAGGTGTGCACTGTGGGTGT TCONS_00121993 TCONS_00121994 . 5' 16965 TCONS_00121993 TCONS_00121994 . 5' 16965 EMBV3_42754 TATAGAATGTACTCTTACGTAACGAAGGAGGGTTATGATCACAGCTACTACTTTATTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18662 CTGTTCCTGTAGAACTCTCCCTGGATTCCATAGCTGGATTTCCTCTCTTAGTTCAGTGAA Gene GeneID:509248|CPLX3:NM_001077889:52_cdna Constitutive 0 NULL GeneID:509248 21 GENE CPLX3 NULL complexin 3 EMBV3_35338 GAAGGGCAGGTGGGCGACGGGCCTGTGGACCAGGCGAACTCCCAGGTCGTCATGCCCCCG Variant GeneID:508384|GATAD2A:NM_001103090:35_cdna 537^992 1 EMBV3_25565 GeneID:508384 7 GENE GATAD2A MGC165927 GATA zinc finger domain containing 2A EMBV3_05680 CTGTCAGTGTCTCATTTGAGTGTCGCACAATATTTGTTGCACTTTGGCATGGCGCATTTC Gene GeneID:533922|NAA30:XM_002690956:317_cdna Constitutive 2 NULL GeneID:533922 10 GENE NAA30 NAT12 N(alpha)-acetyltransferase 30, NatC catalytic subunit EMBV3_07461 GCAGACAGATATCTCTGAACTTGAAAACAGTCCATCATAGACAGCATGAAGCCAAAACTG Variant GeneID:512570|LZTFL1:NM_001034425:113_cdna 199^259 2 EMBV3_29367 GeneID:512570 22 GENE LZTFL1 MGC128583 leucine zipper transcription factor-like 1 EMBV3_08968 CCCGGGAGTGGGTTTTCTGGGTCATGTGTTAGTTCTGGTTTTAGATTTTGAGGACCCTCC Gene BVT0101_073508 + 0 NULL GK000030.2:118982075-118994879 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042897 TCONS_00245591 TCONS_00245592 TCONS_00245593 2 XLOC_025797 XLOC_150768 NonCoding TCONS_00245591 XLOC_150768 NonCoding NonCoding LOC100337353 X:119088702-119387566 x TSS184326 969 2 TCONS_00245591_1 100 0.365325077399381 2 0.996764403756905 0.000784772543700445 0.000486616244679034 0.000908608481326157 0.000590320294277127 0.00131281618004265 0.000201431068520699 0.0010646682882573 0.00239682112278541 0.000220951663443699 3.5096431215725e-07 0 0 1.13280837063401e-06 6.01405655519843e-14 1.10122961638327e-05 0 0 0 0.000668017177978493 0.000832596336302171 0.000249615074472301 9.77306616129547e-06 6.1975874055158e-11 0 0.00185004375591218 0.000725182414417879 0.00137715913332396 0 0 0 NM_001075135.1 UBE2D3 Bos taurus ubiquitin-conjugating enzyme E2D 3 (UBE2D3), mRNA. 9e-122 441 84.18 0.421052631578947 NM_181888.3 UBE2D3 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), 8e-135 484 80.14 0.56140350877193 0 noncoding 0 0 0 0 0.0997636446494594 0.4317403529634 0.00242106066717072 0.960354451535989 TGCATTTGCAACAGAATTTATCATCCAGACATGAACACTAATGGCAACCACAGTGATCTTAGAGTAGTGAACTGAGTGTTGCCATTAGTGTTCATGTCTGGATGATAAATTCTGTTGCAAATGCACCCTTAGGTAGTGTGAAGGGGTAGTTTTTAGGGAAATGAATTGTCAGAGAGATTACACTGCCTCAATATGGGCTGCCGTTCTTTTTCATAGTTGTGGTTTGCCAATGAAATGTATCATCCCCAACTGGACCTGTAGAATATTGTGCTGGAGGGTCCCTGCCCACCTCACTAAGTTCCTTATTAATCCATTCCAGCGCCACAGTCTGTGCTTTTTGTCTGACTCCTCACTGTCTCAGTGTGGGCTCAAAGGTCCAGCCAAAACTCCTGATTATCTGGTGGCTGGGAAGGACTATCTCTTCATCTCACACTGGCTCTGCCAGACACAGGTGCCTTCTTAATAAACAGGGAGGTTGGACCTGGGTGGGGTCACTGGCAGAGAGTAGATGAGGCTGGAGGGGAAGGGGAAACAAGCAGTGGAAACCCTTAGACTCAGACAAGCATCGAGTACCTGATGGAGACCATCCAAATTAGTGGGTTTTTTTTTTTTTTTTTCCTTTCAGATATACACCCGGAAGTGGGTTTTCTGGGTAATGGGTTAGTTCTGTTTTTAGATTTTGAGGACCCTCCTTACTGTTATCCATGGTGGCTGCACCAATTGACATTCCCACCAACACTGTACAGATCGTGTCCACATGCTCACCAACATTTGTTACTCCTGTTCTTTTTGGATGATAGCCCTTCTGATAGGTATAAGATAATACCTCATTGTGGTTTAAATTTGCATTCATATGATGATTAACGATGTTGAACATCTTTTCATGTGCCTCTTAGCCAGCTGTATGTCTTCTTTAGAAAAATGTGTACTTAAGTCTTCTGCCCATCTTTTTCTTGATTTTTTTAAAAC TCONS_00245594 s 5' 1014 TCONS_00248139 r 3' 17455 EMBV3_20210 TTTTGTTGCTCCTCCTCAGGTGCCAATCATCCCAGCTTCCGTCCTTCATCCTAGCCATCT Gene GeneID:787276|ZNF804A:XM_002685247:31_cdna Constitutive 0 NULL GeneID:787276 2 GENE ZNF804A NULL zinc finger protein 804A EMBV3_12812 AGCAGAGGCCTTCCCAGGCGAGTATGTCATCATGATTCGCGACGTGACCACCCCTCCATT Gene GeneID:617176|MORN1:XM_002694124:471_cdna Constitutive 1 NULL GeneID:617176 16 GENE MORN1 NULL MORN repeat containing 1 EMBV3_20789 GTTAATGAGGGACAGGATGGGGCACTCATAACTGGAGGAACCTTTTGTAGGTGTCACTGG Gene BVV0102_198891 + 0 NULL GK000024.2:4278277-4308170 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141022 1 XLOC_085450 NonCoding TCONS_00141022 XLOC_085450 NonCoding NonCoding - 24:4279239-4280961 - TSS105233 1722 1 TCONS_00141022_4 100 0.275842044134727 1 0 0 0 5.9710922627699e-07 0 0 4.15453783874173e-05 0.000403003949639961 0.000484306658348944 9.16391353458554e-06 0 0 0 6.83163924357148e-05 0.000155707552787742 9.11722597699765e-05 0.000920262341736633 0.000597759073722712 0.000174849505023825 0 0 0 0.000788607545506654 0.000340963928063841 3.89422405830455e-05 1.60940300926471e-05 0 1.36101111876268e-05 9.48246539136417e-05 0 0 XM_005206391.1 VDR PREDICTED: Bos taurus vitamin D (1,25- dihydroxyvitamin D3) receptor (VDR), transcript variant X1, mRNA. 2e-101 374 88.19 0.166666666666667 0 noncoding 0 0 0 0 -0.00313615172847641 0.977541424595408 0.0410301674596378 0.629376159573487 GTCACATCTAAACAGAAAGAAGTGAAAATATTAGCTGCTCAGTCCTGTCTGACTCTTTGTGACTCCATGGACTGTAGCCCACCAGGCTCCTCTGTCTATGGGATTCTCCAGGCAAGAATACTGGAGTAGGTGGCCCTTCTCTAGGGGATCTTCCTGGCCCAGAAATTGAACCCTGGTCTACTGCACCATAGGCAGATTCTTTACTGTCAGAGCCACGAGGAGCTCCAACAGACGAGGGACTTAATTCAGAGTCATGAAGCCTGGCAGCAGACCGTGGATGTGCAGTGAGAGTTCAGTAAGGAAAATCCTCTTCCAACATCAGCGACAGAGTACACAGACCTCCCAGCCAGCTCAGGTTGTTTCAGCTGAGGGCCTTATCTTAATGCCGCTGCTGCTAAGTTGCTTCAGTTGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCTCACCAGGCTCCAGGGTCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAATACATGAAAGTGAAAAGTGAAAGTGAAAAATGAAAGTGAAGTCTCTCAGTCCTGTCCAACTCCTATGGACCCCATGGACTGCAGTCTACCAGGCTCCTCCGTCCATGGGACTTTTCAGGCAAGAGTACTGGAGTGGGGTGCCATTTCCTTCTCCTTTATCTCAATGACGGGGTCATAAATGCAGAGGCACTGCACGTAAGTCAAAGTTTTCAATCACAAAAGAAACTCTATTTAGCAGGAAACTACACTAAGTCAGGTACTTTTCATTTGAGTTTCTGGTCATTAAATAGCACAGATCCCACGCTCATTGTGATAAATTCTCATTAATACCATGTTCTTTGTGGCCCGATTAAGCAATGGCCTTCCAGCTAAAGTCAAAGATAGAACTATCAAAGTTGCATTTTTTTTTTTTTTTAACCAAAGGAGAGTAAACAGAGAGCAGATTGTTCAGCATGGCCTGCCACCTCACCAGGGCCAGAGAAAAGCTACTGCTGTTCTGAACTGCTCACCCAGAGAGGTGGGGCCAGGTCCATTTCTCCCTCCCACTCACAGTCGGGTTTTTCCTGTTTCACTACTGCCAGCACCAAAGCCATTAGATAGGACCACTTTTATATGTCCTGGTGAACCCCACTGACGAGGGTAAAAGTGTTGAGCTGGAGGGAATAAAAGCAAGTATTACCAAATCGAAGAGTGCTAGGCAGACGGCACTCTTGAAATCTAAGGTTCCAGGGAGTAACAGCCTTGGCAGTGAATTAGTGTGAGAGGAAGGAGTGACAGGGGAGTACCCGGGACCATCCAGTGACACCTACAAAAGGTTCCTCCAGTTATGAGTGCCCCATCCTGTCCCTCATTAACTCAAGACACAGGAAGAGACTAAACACACACCAGAATCGTGGCTTCAAGTCTGCGTAAAAGCCACTAAAATAGGGGCGGAACCCTCTAGTTTGTCCAATCGCAAACATACAGGTCTACAAAATGACTCTCGGCCACTCCTCCCTGCCAACACCAGGGACAACAAAGGCATGAAGAAACCTCCACCAGACCGCTGAGTCAGCACCAGGATCCCGTGCGTGAGGCGGCGGCGGGTCGAAGGCCCTGCCCGCGAGGCCCAGGGTCTCAAGGACTCAGTGCAGGCCGACCGGGGACCAAGCATCACCGCACCTGACCGGTGGGAAGGCGGACGCTGCCTCAGAGCAACCTCCCGGCC TCONS_00139705 . 3' 67 TCONS_00139705 . 3' 1788 EMBV3_42515 AGAGCCATGTCCTTCCCCAGTCATCCCAGGGCCAGCTCAGCAGAAGACCAAGCAGAAGTA Gene GeneID:507527|SPRR3:NM_001034301:67_cdna Constitutive 0 NULL GeneID:507527 3 GENE SPRR3 MGC128445 SPRR1B small proline-rich protein 3 EMBV3_32826 AGCTCCTAAGGGCCAAGATCACTCTTTGGTGTCTCAAGGTCACAGCCTAGGGCCTCTGGA Gene GeneID:519652|ADAM8:XM_002698475:521_cdna Constitutive 1 NULL GeneID:519652 26 GENE ADAM8 NULL ADAM metallopeptidase domain 8 EMBV3_02530 TCTGTGTACCTGAAGGACAGTGAGAAGGTTGTCAGCATCTCTAGTGAACACCTGGAGCCC Gene GeneID:519808|SUPT5H:NM_001083439:634_cdna Constitutive 0 NULL GeneID:519808 18 GENE SUPT5H MGC142813 suppressor of Ty 5 homolog (S. cerevisiae) EMBV3_40025 ATCCCTTTGAGATGGGCAGCTGAATGTGTGGGCTTGCATCAGTGGCTGTGGTGACTTGAA Gene BVT0102_005462 + 1 EMBV3_03468 GK000003.2:575837-580814 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168185 TCONS_00168186 TCONS_00168188 TCONS_00168182 TCONS_00168184 TCONS_00168183 TCONS_00168191 TCONS_00168190 TCONS_00168189 1 XLOC_103014 Coding TCONS_00168185 XLOC_103014 Coding Coding GPR161 3:523921-579317 j TSS126161 5500 1 TCONS_00168185_4 352 0.0478181818181818 6 0.900821373770196 0.000114869533444506 9.96883369060154e-07 0.000330395812715941 8.64987301103961e-05 0.000430345000173251 0.000138914924427468 7.25773479668522e-05 7.98218067537943e-51 8.60558623760933e-60 1.59121499306079e-36 1.74782878209059e-18 0 7.30909883859794e-05 1.61040647459289e-19 0.000209901325030397 8.84448706914495e-31 1.309809004318e-10 3.08223972958983e-12 0.000111187122228856 7.14448159449755e-05 0.000215942396001241 4.15681260760900e-13 8.89097514528529e-37 2.3601646761704e-20 0.000280792496254335 6.554008333031e-05 0.000435026992412834 2.14607457974436e-17 9.26156168070378e-15 0 NM_001077066.1 GPR161 Bos taurus G protein-coupled receptor 161 (GPR161), mRNA. 0.0 3074 99.88 0.310909090909091 NM_153832.2 GPR161 Homo sapiens G protein-coupled receptor 161 (GPR161), transcript 0.0 2111 88.66 0.297090909090909 TCONS_00168185_4 sp|Q2YDN1|GP161_BOVIN GP161_BOVIN G protein-coupled receptor 161; 0.0 733 100.00 0.997159090909091 1 coding 1 1 1 1 -0.0490805763143595 0.762972934503995 -0.00579067190049044 0.915422963173653 ATCTCCGCGCCCCTTGGAGGTAGGGAGTTATCTTCCTCGCGCACGCCGCTTTGCTTCGAGGATCCGGGGCTCTTTGTGGGAAGATCTTGAAGGCGCGCCCCTCTCCTGCGGCCAGCGGCTTCTGAGAGGCCCTTCCCACTAGCCCGCCTGGCTTCTGCCTCGCTGCCGGAAGCCCCTTTCTCAGACCTCCGGAAAGGGAGGACATCGGTGCGGCCCCGTGCCCCCTGGGCCGAGGGGCTTGAAGGTCCCCTCCGGGACAGATGTGCGGGACGCAGCGGCCTCGACCCTTAGCCGAAATCCGTGAGGACCAGTCGTCCAGCATGCTCTGCCCACCCCCTGCTGAGGTACACTGACCATGAGCCTCAACTCCTCCCTCGGCCACAGGAAGGAGCTGAGTAACCTCACCGAGGGGGCCAGTGACCAAGGGGGCAGCGGCGTCACAGAGTTCGTCGCCATCGTCATCATCACCGTTTTTGTCTGCCTGGGCAACCTGGTCATCGTGATCACCTTGTACAGGAAGTCCTATCTCCTTACCCTCAGCAACAAGTTCGTCTTCAGCCTGACCCTGTCCAACTTCCTGCTGTCTGTACTGGTGCTGCCTTTCGTGGTGACCAGCTCCATTCGGAGGGAATGGATCTTCGGTGTGGTCTGGTGCAATTTCTCAGCCCTCCTCTACCTGCTCATCAGCTCAGCCAGCATGCTCACCCTTGGGATCATCGCTGTCGACCGCTACTACGCTGTCCTGTATCCCATGGCGTACCCGATGAAGATCCAGGCAACCGGGCTGTGATGGTGCTTGCTACATCTGGCTCCACTCCCTCATCGGCTGCCTGCCACCTCTGTTTGGCTGGTCATCGGTGGAGTTTGACGAGTTCAAGTGGATGTGTGTGGCCGCGTGGCACCGGGAACCTGGCTATACTGCATTCTGGCAGATCTGGTGTGCCCTGCTCCCCTTCTTGGTCATGCTGGTGTGCTATGGCTTCATCTTCCGAGTGGCCAGGGTCAAAGCGCGCAAGGTGCATTGTGGCGCTGTGGTCACTGTGGAGGTGGGCGTGCAGAGGACTGGGAGGAAGAACTCCAGCACCTCTACCTCCTCCTCGGGCAGCAGGAAGAGCGCCTTTCAGGGCGTGGTCTATTCGGCCAACCAGTGCAAAGCCCTCGTCACCATCCTGGTGGTCATTGGTGCCTTCATGGTCACCTGGGGCCCCTACATGGTTGTCATCACCTCTGAGGCCCTCTGGGGGAAGAACTGTGTCTCCCCAACCCTGGAGACCTGGGCCACTTGGCTGTCCTTTACCAGTGCCATCTGCCACCCTCTGATCTATGGACTCTGGAACAAGACGGTGCGCAAGGAACTCCTGGGCATGTGCTTTGGGGATCGGTATTACCGGGAACCATTTGTACAGCGGCAGAGGACGTCTAGGCTCTTCAGCATTTCCAATAGGATCACAGACCTGGGCCTGTCCCCACACCTCACGGCCCTCATGGCAGGCGAGCAACCCCTGGGGAACAGCAGCAGCACCGGGGACACTGGCTTCAGCTGCTCTCAGGACTCAGGAACAGATGTCATGCTACTTGAAGACTACACATCGGATGACAACCCTCTCCATGGCACGTGCCCACCCAAGAGGAGGAGCTCGGTGACATTTGAAGATGAAGTGGAACAAATCAAAGAAGCTGCCAAGAACCCTATTCTTCACGTGAAAGCTGATGTGCACAAGTCCTTGGACAGTTACGCAACCAGCTTGGCCAAAGCCATAGAGGCTGAAGCCAAAATCAACTTATTTGGGGAGGAGGCTTTGCCTGGGGTCTTGCTTACAGCTCGGACTGTCCCTGGAATTGGCTTTGGGAGCCGCCGAGGCAGCAGAACTCTCGCAGGTCAGAGGCTGCAGCTTCAGAGCATCGAAGAGGGGGATGTTTTAGCCACAGAGCAGAGATGAGGGTGGACGCCCGTTACCATCTGTGCCAGGGCCCCGTGAGCAACATCTGATATGCAGTCATCTGAAAAAACACTGAAAACAGTGTCTGTAAGTGACTTCAGTGTCTGTGTGAGACCACACGAGGGCTTTCTGTGGATCCCAGTGATGGGACCAGAGCACAAAACAGAGCAGATGGAGGTGTGGCTGAGACTCTGGGCGGAGTGGGGTTTAGAGGGGGCTAGAGGCCTCAGCTGGGCAGGAAAGCACCATGTGGGCCACCTCCTCTTCTTCACAACCTGTGTCCTTGGGAGTCCAGCCATGCATTCTACCAGAGACCTCGGGACACTTTGGAGGATGGCGCTTCCTCTGTGTGGCTGATGCGGGCTGTGTGGGGCCATTGGTTCTGCCCTGAACAGTCCCCAGAGGAGAGCCCAGGAGCACAGACCCCAGACCCGTGCGTCCTGGTTACAGCCTTGCCTGTGGGTCTGCTGATTCTAGTAGGGACCGTTCCCTGGCTGCTGGGCAGCGGCAGCAGCTCTGGGGCTGTGGCCACTGAGGACAGGCCTCCCTATGGACTGGCTCCTTAGTATTTTAAAAGAAGGGAGAAACCACTGTAAAGCACAGGAGCAAGGAACAGATACCAGACGTTTCATTTCTAGAAAGAAAAACAACCCGTGTGGTTAGGAAGCACCTTCATCTTCCGGACCTGAACAGGGCCGCGGGGCCAAGCACTGCCGAGTAGTTACTGCTATCACTGGAGGGAATCCCCTTCACACAGGAAAATCCCGTGGAATAGGTTCTGTATGTGATGCCTCATGTACTGTTTAGATTAGCTGGCCTCCAGGGAAAACTCCCATGGCCAGCAGCTACTATTTCCCTGCCCTCAATGTCTTAAGAAAGACTTGAAGAACTCTGGACCTGGCGTCAGGAACTGTGTGCCGGCCCGGCTCTGCCTTATGTTACTCGGGTCACTGGGACTCCCTGTCACCTCTGGGCCATCTGGAAAATGAGCTAGGGATTGTGGGGCTGGACTGTGTGTGTGCTTAGTCATCCAGTCGTGTCTGAGTCTTTGTGGTCCCGTGGACTGAGAGGTGGCCAGGGTCCTTTCTAACTCTGATCTTTGGTGTTCTCTGAATTTGTTAGGGGGAAAAAAGTGACCCATGGATCAATAATTGCACAGCTTTTGGGTGTCATGTCTGATGGGCATGTGAAGCACTTCAGGCCTGACGCATGGGCTGATCCAATGTGTCTGTTTAGAGCACAGTCCTGACAGGATGCCAACCAGAAGGACATACAAATGGGTGCAGAGGGCATGTCCTCAGAGGTGGAAAGTGGGGCCACGGATTGTGATGCGTACGTGAGATCTCTCCCCATCCCTTTGAGATGGGCAGCTGAATGTGTGGGCTTGCATCAGTGGCTGTGGTGACTTGAACCACCTGTTCCTGCCCTTCAGCCTAGATGACAGCAGCCAAGTGCAGGTCTTGCCCCACTTCTAAATTCCAGGTGGTCAGCAGAGGATAGATTCTGAGCTCTCCCACATCTGTTATGAGGCAGCCGTTCCAGAAAGTGCACCACCTTTGCAGTGTTTCACTGTAACTAGTTCTCCAGCAGGCAGTGTGCCTTTGCTGTGTGGCAGAGACCAGTGGTTGGCTGGTCCCTTTGTCTGCAGTTTACAAAAGACTTTTCCTTAGATCTGGGGGCTGCTACCTTCACAGTGATCAAATTCACCCAGTCTGCATTCTGGCTGGAAGAGGGAAGCAGCAGAGGGCAGTTTCACCTGTGGGTTCTGCTGAGGTGATGTGCAGATCAGTCAGATTCTGCTCTCACTACTGGCTGGCATTCCTAAATCTGAGGGCATTTTTGCTTTCTGTACTTTTTCCTAGCACTTGTCCTTATCCAGTTTCTAGAGGGACCATACTCTAGTATGCTCTCAGGGGGAACAGGGCAGGAACCTAAGATGACCGCCCCCCCGACCCCATCCACCCCCATCAGGCCATTTTGAGTGCAACGAAGCGGCCTGCATCCCAGGAGTTGGAAAGTGCCTTCCCTGGACTGTACTTGGCTGGGCTCGAAGGAGTGTCCTGAGACCTCCCAAGTCCTCACAGGCTGATCCCAGACTAGCTGGGATATACTAGATTTCATCTAAGCCAATCTAGAAATACTGTACTTCCCAAAAGCATTCTCTGCGTTTCCTCCTTTGTACTGAAGTCCATTCATTCATTCATCTTCCAAGCACTGCACATCTAGCGTGTGCAAGGCATCAAGCTAGGCTCTGTAATAACATTCAAGTGTTTCACTCTAATGTAGGAAGAGACCTAGAGGAGACTGAGGCTAATAAGCAGCAAAGTCAAGCAATGGCTCTAGGAAGAGCTGCAGGCTCTGTAGGGAGCTGAATATTCCCAATTAGAAGGAGTTAGGGGTAGCACGCTATAGGAGGTGACTGAACCAAGACTTGGAGGGTGTCCGGCAGCTAGAACCATATTCTGCATATTGAGGAATTCAAATACTCCTTACTCAGCCTGAGTGAGAAGGGAGCGCAAAAGGAGGTGAGTGGGGAGAGGACAAAGACATACTCCCCGTACACTGAGGTTTGTAGGGGGGGCAGTTTTGGGGACACTTGTCCTTGGTGCACAAAGTCAAAACCCCAACTGCCCTTGCTGAACGCTGGCCCATTAGCTTTATCCCGCTGTGCGGTGGCAACCTGAAGCCTTCCTGAGGGGGCAGTGTGGGGAGCGGTAAGTGGGACATTTGGCCACTTAACATAAAAACCTCAGTTCTGCATCTTCTAGTTTTGACAGGACCACCTGTAGGACTGTTGCCCATCTCTACTGCTTTCATCGAGGTTACCACTTGACTAAGTACCCCCCATGCTGTCTCCCAGATGCCAGGTTTGCGGGCTAGTGTGACCTGGAAGGCACGAAGTCCCACACTACCAAGCACACAGGTCACTGCCGAGGCCTTTCCCAGGCTCCGATTCAGGGCCTTCGACGCCAGGTGGCAGCAGTGTGGCTGTGCACCACCGGCTGTCCCCAGCGGGAAAGAGTCGAGGATACAGCTGAAGGCTTGTTTGCTCCTGGCTTAGAGCACCTCCTCTGAACGCTGGGTCTCCACCGCTGTCCTCAGCCTTTAAGGACCACCCAGCTAGCTTGCTTACACTGCTCAGCTGTGTGATCTTAAACAAATCCCTGCTGTAGGAATGGGGTTGAGGAATGTAAGAGAAGGGCCATCTGGTGTTAATGTTGTTAATGTTATTTGATTCTCATTTAAGGAGCTGCTGTGTAGTCTTTGAGCAACTGGTGAGACTAACTCAAGTATTTGCAATAGGACAAGGAATCCTGGGGTGGACAGGACAGGAGAGGGAGGAAAAAGGCTTTGATACAGTGAGAGATAAGAAAGCTTTCTTAAAAGTGAACAATGCAAAGAAATACTGTGCATCGAACCTGGACTGGCGACTCGTTTCATACATGATATTATACATGTTTCAATGCCATTCTCCCAAATCTCCCCACCCTCTCCCTCTCCCACAGAGTCCATAAGACTGATCTATACATCGGTGTCTCTTTTGCTGTCTCGTACACAGG EMBV3_39305 GAAGCCTGGATCCTCTCTGGCCAACAGCAGCCCTGAGAATAGGTCATCTCTTGGCCCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03552 AGGGACCTCAAAGCCAGAAACGCAGCCAAGGGGACCCGGCGCCCGAGAGTGGTGAGGGCC Variant GeneID:281576|WARS:NM_174218:121_cdna 171^264 2 EMBV3_40080 GeneID:281576 21 GENE WARS NULL tryptophanyl-tRNA synthetase EMBV3_21738 ATCTATGCCTTCGTTGGTGAGAGGTTCCGGAAGCACCTCCGCCACTTTTTCCACAGATAT Gene GeneID:408018|CCR3:XM_002697095:205_cdna Constitutive 0 NULL GeneID:408018 22 GENE CCR3 NULL chemokine (C-C motif) receptor 3 EMBV3_36286 ACCTGAGTGCCAAAACAGAACTACAGGGTTTGATCGGACAGTTGGACGAGGTGAGTCTTG Gene GeneID:522854|BAG5:NM_001040544:253_cdna Constitutive 0 NULL GeneID:522854 21 GENE BAG5 MGC133732 BCL2-associated athanogene 5 EMBV3_30353 GCCTTCTTGGAGGGGTACCGTGTTTTTGCTGCATATTCTCATTTTACAGTCATCTGTGTG Gene GeneID:614283|GRIA2:NM_001076321:120_cdna Constitutive 0 NULL GeneID:614283 17 GENE GRIA2 GluR-2 GluR-B GluR-K2 MGC139795 glutamate receptor, ionotropic, AMPA 2 EMBV3_27899 AGGAGACCTGCGTGACCAAGTGTGTGGATGACCACATGAACCTCATCCCAACCATGACCA Gene GeneID:528794|LOC528794:XM_002685751:514_cdna Constitutive 0 NULL GeneID:528794 2 GENE LOC528794 NULL similar to Protein FAM136A EMBV3_41687 CACCAAGCCTTCCTGTTTGGGGCAGATTGGGTTTGGACCTTCTGGGGATCTGATAAGCAA Gene GeneID:614599|REP15:XM_002687730:44_cdna Constitutive 0 NULL GeneID:614599 5 GENE REP15 NULL RAB15 effector protein EMBV3_35647 AGCCATGGAGGACGAAATGCCTAAGACTCTACAGCCGGAAATGATCCATATTGTTTTGTG Variant GeneID:538533|TIA1:NM_001076109:56_cdna 205^301 1 EMBV3_38853 GeneID:538533 11 GENE TIA1 MGC143006 TIA1 cytotoxic granule-associated RNA binding protein EMBV3_43445 AATCAATAGGTCCCTGCAAGGGCAGGAAGATCAGGTACTTCTACAATGCCAAGACCAGGC Gene GeneID:515917|LOC515917:XM_002692339:141_cdna Constitutive 0 NULL GeneID:515917 13 GENE LOC515917 NULL similar to trophoblast Kunitz domain protein 2 EMBV3_37408 TTTATCCAACAATTTCTAATTTAAGGCGACTTCCCCACCTCCGCTTGCACCTCCCAGGGC Gene BVT0102_296521 + 0 NULL GK000006.2:109585685-109613820 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206254 TCONS_00218368 TCONS_00129429 TCONS_00011558 TCONS_00156834 TCONS_00130705 TCONS_00057018 TCONS_00173130 TCONS_00034471 TCONS_00122090 TCONS_00138406 TCONS_00206255 11 XLOC_124865 XLOC_131688 XLOC_078142 XLOC_007109 XLOC_095294 XLOC_079413 XLOC_034820 XLOC_104301 XLOC_020687 XLOC_073646 XLOC_084614 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_25082 CCTGGTGCCTCCAAGGAGACTTTGCCAAATGTAATTTCACCTGTTTCCTTCCGTACAATG Gene BVV0102_161354 + 1 EMBV3_36852 GK000002.2:28310678-28400754 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104929 TCONS_00104930 TCONS_00104932 TCONS_00104927 TCONS_00104928 TCONS_00104931 1 XLOC_062476 Coding TCONS_00104928 XLOC_062476 Coding Coding B3GALT1 2:28397753-28449972 o TSS77572 4329 1 TCONS_00104928_4 326 0.0161700161700162 2 0.917135853537094 0.000739919624807405 4.31749592842003e-09 3.71274365983862e-07 1.39883980714325e-17 0.000508152913151003 1.42143477972651e-07 6.43536145030112e-05 1.23259823014514e-05 9.46777149512775e-07 5.06881513507442e-09 1.75525693035753e-13 1.56349610520602e-07 1.13242964697479e-07 1.76147320037721e-169 4.18774236101079e-05 0.000300686459313637 6.42954343078693e-07 1.01602558161056e-06 1.65192179266887e-19 1.06769586199519e-22 1.18634092939249e-07 2.91730278213188e-07 1.71543816429829e-39 1.19577018429931e-07 0.000494542726469014 9.02446463125983e-07 4.57255932446146e-36 4.26026743619743e-07 2.89936557309854e-22 2.39770792165984e-07 XM_005202397.1 B3GALT1 PREDICTED: Bos taurus UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (B3GALT1), transcript 0.0 7808 100.00 0.999768999769 NM_020981.3 B3GALT1 Homo sapiens UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (B3GALT1), mRNA. 0.0 2268 83.26 0.489027489027489 TCONS_00104928_4 sp|Q9Y5Z6|B3GT1_HUMAN B3GT1_HUMAN Beta-1,3-galactosyltransferase 1; 0.0 681 99.08 0.996932515337423 1 coding 1 1 1 1 0.0398688209856982 0.730681073829778 -0.00486667951360926 0.934869670410157 GTGACTTCAGTTTGCTAAGCAGCAGCTTCTCCTGGCATGAGCCACTGCAGATCTCCTCATCAGACGGGCTGAGACTATCCTGTGTGCCCTGCACTTGGAGTAAGGAGAACACAGCAAGAGTTTAGAGGAAGATTGATGAGGCATGGACCCTTGCTTCAGGTTTGGAGGAAAGTAGACTAAATACAGAGATGCCAGACAGCCACTGAGGCCCATGGACAGTCCTGCACTCACGCTGATCTGTCGAACTTTAAAAGTTCCTAGTACTATGCAACCTTTGCCAAACGAAAAGAAACTGATGCCGAGAAGGCATACTCTTCAATACTGGGAATAGACCTGCTCTCGGGACAATGGCTTCGAAGGTCTCCTGTTTGTACGTGTTGACCGTGGTGTGCTGGGCCAGCGCTCTCTGGTACTTGAGCGTAACTCGCCCCACTTCCTCCTACACGGGCTCCAAGCCATTCAGCCATCTGACGGTTGCAAGGAAAAACTTCACCTTTGGCAACATAAGAACTCGACCTATAAACCCCCATTCTTTTGAATTTCTGATAAACGAGCCCACCAAATGTGAGAAAAACATTCCTTTCCTTGTCATCCTCATCAGCACCACCCATAAAGAGTTCGATGCCCGCCAGGCGATCCGAGAGACCTGGGGCGACGAGAACAACTTCAAAGGGATCAAGATAGCCACCCTGTTCCTCCTGGGCAAGAACGCCGATCCCGTTCTCAACCAGATGGTGGAGCAAGAGAGCCAAATCTTTCACGACATCATCGTGGAGGACTTCATTGATTCCTACCATAACCTTACCCTCAAAACCTTGATGGGGATGAGATGGGTGGCCACTTTTTGTGCGAAAGCCAAGTATGTCATGAAAACAGACAGCGACATTTTTGTCAACATGGACAACCTTATTTACAAACTCTTAAAACCCTCCACCAAGCCACGAAGAAGGTATTTTACTGGCTATGTCATCAACGGAGGGCCCATCCGAGATGTCCGCAGTAAGTGGTATATGCCCAGGGATTTGTACCCTGACAGCAACTACCCGCCCTTCTGCTCGGGGACCGGCTATATCTTTTCAGCTGATGTGGCTGAGCTCATTTACAAGACCTCACTCCACACCAGGCTGCTTCACCTGGAGGATGTGTATGTGGGACTGTGTCTTCGAAAGCTGGGCATCCATCCTTTCCAGAACAGTGGCTTCAATCACTGGAAAATGGCCTATAGTTTGTGTAGGTACCGCCGAGTGATCACCGTGCATCAGATCTCTCCAGAAGAAATGCACAGAATCTGGAATGACATGTCAAGCAAGAAACATCTCAGATGTTAGTGTTTTTACCAATGTAAATATGTGTTTCTTTTCTTTTTTAAGAGATGAGGCTTAGGGTGTAGGTATTTTACAGGTGTCACCAAGGGAAATGAACTGGTGAAGGGGTTTATAAAAAGTATTTTTCTTCCCAATCCTAGTTCCTTTTTTGAATCGCCAATTTCCACACGTTAAGCTATGCTCATAGAAATAATACATGGGTTTACAAGGCCAGATTTCATTCTCAGGTCCTAAGGTACTGCATTTATCTCAAAAAGCAACTTCCTAACGAAGGCTAGGATTTACATACTGTGCATCTGAGATTAAAAAAAAAAATCTGGTTCTGGGAAACTGGAACTCATTGTAATGTCTTCATATTCTTTCTGCAAAAGTAAATAACACTTTATCAAAAACAATTCAGAAACAGCACAGTCAGGGAGACACACTGGATGTGATGATTCATACTGCATGTGATGTTACATTGAACTTTTACATATATTGCCATGGAATGTGTACAGTATTTCCAGTACCACCAAGAAATGAACTTAGTACTGGTAGGGAGGCTGCAGTTAAGTAAAATGGAAATTTATACTTGAGCATCAAATATTCTCTCTGTTTGGAAGACAACTCTGCTTGCTCATCCAAGGGTTAAACCTGGTCAGCAGGTGGAATGTATATAAAATGCTTCTTAAAAAATAAACAGGAGATTTGTTTTTGCTCTTTCAGAACAAACATTACCTGGTGCCTCCAAGGAGACTTTGCCAAATGTAATTTCACCTGTTTCCTTCCGTACAATGTCACTAAATACCTTTTACAGTTTCTGGTTCAGACAGGCACATGTGTAGAAATGTCGGTAGGAGGCCAGAAGGATGATAAATGACATGGAGAAAAAATAGAAATTTACATGTGCATTATAATTAGCATGAGCTTAGCACTGGTGTCAAATGCCCCTTCCATACATTTACAAAGCTCATGAAAAAATATTTGAGGAGGGAGCAATGTTACTGAAGGATTTAGGTCTACTGTTGATAGATGCAATCTCTTTAACATCCGATACATTCAAGTATCTCTAACAGCAATGCTGTTCAGGGGTATTCTGGAAGCTCTGTGATTGAGGATTATGGGAAGGAAGGGTGGGGAAGCTTGAGTTCAGGTTCTATGGCTGCCATCATGTGAATCATGTAAGCCTGCAGCCTCACTTTGCTGTGCTTCCATACACTCATTTATAAAACAGCTGGAAAAAACACCTACCTTACAGGTGCTGTGAGAGCAAATTGCATTTGCTAAATATTTGGGGATCCTTAGTTTTAAAGGTGCTACTTTAAAGCAGTGTATCATGCATTATGCTAAATGTTAAAATAACTACATAATTGCCATGATGGTCATCAGTAGTAGTAACATCATTGTAGTATAATATCTGCCAAAATACAGATCAAATATAACAATTAGTGCACCTGATTCTTCTAAGACTGACTTTTCCTTGAATATGTTAGGTGTTTGGGAAGGCTTCGATTTCTCTGTCATTTCTTCTGGTTTCAATGAATAAGTTATTACTTCAGTGCATTGCCTTGATATCCCAGGATGCTGACAGGAAAGGCAGCTGCCTTTCTTGAGGGAGGAGCCTCTGGCTGCAGGTACATTATAGTCACTGAAGCATACGCTTTGCAAAATGTATCACATCCAGTTAGATCTCAGGAAACATTTGGTCTGGGTTCTCAGTAAGAACTTTGAAGCCTGGCAGAGGTAGTCCACCTCTGGCAGAAGAATAGACACTCAGCAAACCCACACATTGCACATTTCCAGCACTCATTAGAAAACTTCTGTTTGCTTCTGTTCAAAGAAAGCACCACAACTGAAAGAGTATACCTTTTTTTTAAACCTGCCCTTTGCAAGCCCCTCTGGGAGTTCATAGCAAATAAGCAGATGAAATGTACAAATGGAAATCAAGGCTTATTTCTTGAAAACACTGAATCTCTCATCTCCAGCCCAAGAGAACCTAATAGGAGACAGACCTTCCTGTCCCTTAATACATCTTCATCTCAAGTCAGCAGGACCACTGAGTTTGATTAGATAATAACATTAGGTAGCCTGGAGAAAGATGGATCAGCACAAGGCGAGCCACCCTCAAACCCCCAAGTCGCAACTGCTGTGAGTTCCAATCACTGGAAAAGTCTCACAACTCTGAACTTAGTTTGCCTGTCCATCATGTAGTCGAATCAAGGCCCAGTCTTATGCCAACGTCTTGCGTTTACCTTGTGCTCAGTCGAGCCACCTTCAGTGTTAAGGAACTGCACATTATAAACATCACATGTATACATCTGTGGGTCACTTATAAGTGTGTGTGAGTACATTATGAATAGAGCCCTAGTCTTGAAAAGGAGCAAAAATCGAGAATCATGTCTTAAAGAACTATTTCCTAACTTTTTTATGCTAAGTAGTACCCATGTGACAAACATGTAAATATTCATCAAAAACCATATGTATATATTTTTAAAGGCATTTTTTTCTTCTTCCCAGCTGTATGTATTGCTAGAATCTGCTTGCTATGTACATTTCCTTCTGCATGGAACTTGGTGAGGCAAGGTCATTTGTCCAGTTTCAATAGCCTAAAGCATGGTTGCCCTTTGTTTTTTGAATGTTCCAAAAATGTTTAAATCAAGTGATCAGGAAAAAGCTCTAATTTTCTACTTTTGCTAATTTTATGACACTGGCCAAATTAGTATTAGTTAACAAATCAGTGATTTGTTAAGCCATTTTTAAACTTATTATTATTTCTTTGACATAAAATAGTGTTTCAGACAGCATTTTACCAGAAGTCAATTCAGACAATTTTAGGAAAACCTTCTCACTGTCCCCCAACTTGTTTTGTTCATTATGCATCAGATAACAAAAGATATCAATACTTCATGTCTATACTCTTAAATTTTCATTAAAAATTTTTTTTGGGGGGGGAATCTGTCTTTGGTGGCTAGTTTGTGTGGCTTTGTGTCTTCTTATATTGGAGCAAATGTCAGTTTCAATATAT TCONS_00104933 s 5' 0 TCONS_00104933 s 5' 0 EMBV3_41525 TCAAATTGGAGAACTGCGGCCTCACGGCGGCCAACTGCAAAGACCTGTGTGGGATCGTGG Gene GeneID:517087|RNH1:NM_001035319:2_cdna Constitutive 1 NULL GeneID:517087 Un GENE RNH1 MGC126921 ribonuclease/angiogenin inhibitor 1 EMBV3_06572 TTTAGAGGAGAAGCTGATGGATATGGAAATGGCCCCAGGTCTAGGGATAGCTGTCAAGGG Gene GeneID:512831|LOC512831:XM_002688897:162_cdna Constitutive 0 NULL GeneID:512831 7 GENE LOC512831 NULL similar to heterogeneous nuclear ribonucleoprotein B0b EMBV3_10076 CACTGAGGTCCCTTACAAGGTCAAGAAGGAGTGTTAAGGAGTTGTCTTGATGCTGGGAGG Gene BVV0102_162744 + 0 NULL GK000018.2:58067886-58078650 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091229 1 XLOC_056005 NonCoding TCONS_00091229 XLOC_056005 NonCoding NonCoding - 18:58074806-58075683 - TSS68575 877 1 TCONS_00091229_1 54 0.833523375142531 1 0 0 0 4.22075111753637e-05 0 0 0 0 2.0232730138616e-05 0 0 0 0 4.58037574643886e-05 0 0.00027971502469281 0.000271042331695529 1.89307533192204e-05 0 0 0.000467402724255623 0 0 0 7.64634795138076e-05 0 2.41008908132057e-05 0.000133617978115497 0.000219046064821446 0 0 XR_228953.1 LOC101904492 PREDICTED: Bos taurus uncharacterized LOC101904492 (LOC101904492), 5e-42 176 72.87 0.361459521094641 0 noncoding 0 0 0 0 -0.0275923307513942 0.815267652861584 0.0485585563731932 0.546552830496868 CCTCAACATTGTGCTCTGTTGCCTGTGCTTAGTCATAATGCACATTTTGCAAAAGAATGTTGCCTAGAACCTGAAATATATAGGACAGCCCATCCTCAAGACTCTGACCATTAAGCCTGTGCTCTGCAACAAGAGAAGCCACCACAATGAGAAGCCCGTGTGCCGCACCTCGGGAGCAGTTCCCACTCCCTGCAACTACAGAAAGCCTGCACAAAGCAGTGAAGACCTAATGCAGTCAAAAATACTTCTACCCTAACTTGTTGAGTGCCTACTCTATGTAATACAATTCATATAGTTCCACTTGCTCTTTTTTTCCTTCCACTGCCCAGGGTTAACTGTACACTTGTCTTCATGTTTCTTTTTATAGTTTATGTGTATGTGAAATAAAATTCACACTTTATGGTAAGACAAGAAATATGTGTTTTTTTATATTATTATTTTTTGGCTGTGGCACGAGCCTTATGGGATTTTAGTTCCCCAAGCAGGGATCAAACTCCAGCCCTTGACAGTGAGAGCATGGAGTCCTCACAGATGGACCACCAGGGAATTCCCAGAAAAATTTAAACATAAAAAATTTTTCCTGTCCGGTGGCCTTCCCTCACCCCCAACTGTGCCTTGTGTACCTACATTAGGCATCGACCAAACCTCCCCCATCAAGAGAAATACCGACTCAACCACTAAGAGCAACATCCTCCCAGCATCAAGACAACTCCTTAACACTCCTTCTTGACCTTGTAAGGGACCTCAGTGATGCTTAGATCTGGGTTGTGTAAACTGTCAACAGTATGCCATTTAACGTACAGCCGTCTGTCTCAGAAAATATATATGTGTGTTTTGACTTCCAACAGGTAGAACAGGTTTTGGAACTTTCTGAGAG TCONS_00087240 TCONS_00087242 TCONS_00087243 TCONS_00087241 TCONS_00087244 . 3' 3768 TCONS_00087240 TCONS_00087242 TCONS_00087243 TCONS_00087241 TCONS_00087244 . 3' 4644 EMBV3_25630 GTCAGGCGAGGGCGCCCGGGGCCACACTCGCGCCGTGGAGAACCAGTACTCCTTCTACTA Gene GeneID:617840|SH2B2:XM_002698114:375_cdna Constitutive 0 NULL GeneID:617840 25 GENE SH2B2 NULL SH2B adaptor protein 2 EMBV3_22665 CTACCTCCTAAGGGTGAAGCTCAGATAAGGCAGCAGGTATGAGTAGCCCTGGAATTCACA Gene BVT0102_094622 - 0 NULL GK000010.2:15197137-15470673 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019447 1 XLOC_010127 NonCoding TCONS_00019447 XLOC_010127 NonCoding NonCoding - 10:15391389-15393642 - TSS13337 2253 2 TCONS_00019447_4 78 0.229471815357301 1 0 0.000760903843932617 0.00027652203472906 0.000303948630525386 0.00131952396321523 0.000587289799831181 6.50950988408083e-05 0.000142363303045383 0.000207395274633805 0.000126074000867432 2.37409779785667e-05 0 0 0.000354043883312764 0.00145316013117329 0.000172032618318211 0 0 0 0.000515619521511699 0.000102142000357944 5.92862894159491e-05 0 0 0 0.000285995489997515 0.000312715212480504 0.000182042450301699 0 0 0 0 noncoding 0 0 0 0 -0.191809006947335 0.223064249805868 0.0409430660969715 0.409317299385769 GCCGTTGCTCTTCCAGACCTCTGTTCTGATTGGGGAGAGTGACAGACAGAAGGGGCGAGCCAGCAGCATGTGAGGAATCAGAAACATTTTGCTTTTGCCTTGGGAGCCTGTCACGTGGGCTGTGGGCAGCAGATTGATGTTCCTAATTACATTTGGCTTAGGCTGATATTAAGTATCTGTCTCCTTCCCAGAGCCCACAACCCTGGCGGATGGTGGGGAAGGTGCCAAGAGGCATGCTGGGTAGCTAAGGATGACAATCTGGGATTTTAAATATCCATGAGAGAGAAACATGGACAAGTCACAGTCGTGGGGGGCAGGGTGGCTCGTGTTCTTGAATTGCCCTTTAAAGGTTTCCAAGGGCTACGGGGGCTTCAGAAAGGTTTTGAGGTCCATCCTCCTGTCTTGAGGCTGACCTGTCCAAAACAGCCCAGACAGGGCATGTGACCCTTTCTGATGCTGGACAGCTTGCTAAGGGGAAATGCTTTCATGGATCTAATTTAAATTTCTTCTGTTGCAGGTCAAACGTTTACTCTGCTTGATTTTGTCCTTGGTGGCATTAAATATTCACTGAGCACCTACTGTGTGCCCGGGGTACACAGTAAGAGAAGACATGCCCTGGTTCTCTGAACGCTTGCAGGCTCACAGTCTGTATTGGCCAGAAGCTCATGAAAACAAGTCCAGACGCTGGGACTCAAATGCAACATGGGGACCCGTGGGGGGTGGAGTTGTCCGGGGTTTGGCAAGGAGATGGGACTGTGAGAGGCAGAGAGAGTCTAGATCAGTGCAGAAGAATGAGGAGGGCATTCTTGGGAGGGGAGTAATGTGGTCAAAACATGAGGTCCATTGAGGAACACACTGAGGAAGAGTCTGCACAAATCAGATGCCTGAGGCTTGTGACATCATGTGCTACCCAAGAGACTGAGTTTAAACTCCTTGTGGCTGAAAACAGGACTACTAACTGTCCAGCTACCTCCTAAGGGTGAAGCTCAGATAAGGCAGCAGGTATGAGTAGCCCTGGAATTCACAGCTCCAAAGCACAATGCTGTGCTCAGTTGAAAATGACTTCTGTTCAAAGTGTTGGCTTTGTCATTGTGTGATCTTGGGGAGGTCCCCGCCCCTCTCTGAGACTGTTCACTCATCAGCAAACCGATAATGGTAATTCCTTCCTCATACTATTGCGTTAGGGATCACAGGAGAAAATGTAAATAAAAGTAGCAGGATGATCCACAAAGAGCTCTACAGATGCTGATTATTACTGCTACTTTAAACAGTGGGCTCGGTGAAGGCAGGCATCCGATCTCTTCTCTGTTCCTCCAGCGCCTTCTACAGAGCAGGTGCGCATACCATTGTGGACAACTTCTTGTATTTGATTGAATTGTATAATCTCCAGGAGCAGAAAACTAACACTTCCGGGCGTAGGGGGAGGTTGTGATGCGTGGCAGATCCGTCCGCCTCCATCTCCGCTAACCCCTCCCCTCCTCAGTTTCAGTAGTTCGCAGTCTGCCGAAACCGGTTCTGCTCCTGTGCTCATGAGGAGGACTCCTTTCAGAAGACTCGCGGGGCCACCTTCAGGTGGTTGTACCTCAAGTCCCTGAAGCAGCTCCAGAGTGTGGTGGGAGGGACCCAGGTCAGGATTAGTTCACCACCGAGGACGCACCTGTGTTCCCCCAGAGCAGCGCTAAGCCCGAGGGTCGTACGGGCACACCTGGGGCAGGGCTCGTCCTGTCTCTAGAACGCAGCTTTTATAACCCGGGCTTCGGTACAGAGCTCAGAGCTCGCGGCGACGTGGAAAGAGCGGGCTCCCAGAGAAATGCCAGCCCGGCTGCACGCCAGTTGTCTCAGTCACTTCCGATCCTGACCCTCAGTTTCCTCCTCTGTAAAACTGGCTACGAGCCCCCCTGGGCCACCTTCTCGCTGCGGGAACGAGACTGAAACGGGTGCTGCGCCCCTCGGTGCAGGGGTCTGCAAGACGCAGGGGGTTCAGGCTGAGTCCCGACGGGCGGCTGCCACGCCCCTCTCGGCCCGCCGCTCGGCCCTCCCAGCCCGCCGGCCGACTCCGCGCACCTCCAGGGGGCGAGCCTGGCGGTCGTTTCGGCCCGCGCGGCGCCTCGGCCATCTAGCGTGTGACTTCGCCAGCGGCCCGGGGCCAACCGGGCACGCAGAGCCCGGGTCGCCGCCATCCCCCGCCCTAGCTGGCAGGTGCCAGGACCCAGCTCGCCCGCCCGCCAGGCGGCCGCGGGCCTGAAGGGTTAA TCONS_00012777 . 5' 177 TCONS_00012777 . 5' 177 EMBV3_16128 GTAGAGGGAGATGCCACACTCTCCACCTGAATTCCTGCGTTCCCTTCAGATGCCTGCCTT Gene GeneID:511087|OBSL1:XM_002685586:192_cdna Constitutive 0 NULL GeneID:511087 2 GENE OBSL1 MGC143036 obscurin-like 1 EMBV3_03289 GTACCTAAGTCTTCTGTGAAATAATCCCCCACCCAGTCCTGATGCTGTTGCAGATGGTGG Gene GeneID:506325|ZMYND11:NM_001045940:23_cdna UTR3_Alt 3 NULL GeneID:506325 13 GENE ZMYND11 MGC137432 zinc finger, MYND domain containing 11 EMBV3_32755 ACCCATAAAATGACAATACCTTCTACTCACCATTGTTGTAAGTTTTTCTTAAATTTCATG Gene GeneID:539067|LOC539067:NM_001102224:161_cdna Constitutive 2 NULL GeneID:539067 3 GENE LOC539067 MGC148531 chromosome 1 open reading frame 103 ortholog EMBV3_31316 TAACCATCAGCCTTGTTCAAAACTTTTTAGAAAGTGATCGGTTGGTACAGATTCCGGCGA Variant GeneID:510233|FAM175B:NM_001166587:27_cdna 220^286 4 EMBV3_14154 GeneID:510233 26 GENE FAM175B KIAA0157 BRISC complex subunit Abro1 EMBV3_42948 AATGCTATTCTAAACAGCTCTCTTATTCCGTGGGGTTGACAAGCACTAGACCTGGGCCCC Gene GeneID:540422|LOC540422:XM_002692554:189_cdna Constitutive 0 NULL GeneID:540422 14 GENE LOC540422 NULL similar to tigger transposable element derived 5 EMBV3_33167 AATCATAATTGAATGATTTTATAAAACCCTTTCTCTTAAAAATGAATTTGTTGAAAAGAA Gene GeneID:534937|UPP2:NM_001076043:118_cdna Constitutive 3 NULL GeneID:534937 2 GENE UPP2 MGC140537 uridine phosphorylase 2 EMBV3_00761 CTATGCCATGCGTTGTAAGTACAGTGGGGGATAAGCCGTCCTTTGATACGTGAATGCTGG Gene GeneID:445424|C16orf80:NM_001003905:96_cdna Constitutive 0 NULL GeneID:445424 18 GENE C16orf80 GTL3 MGC137437 chromosome 16 open reading frame 80 EMBV3_31324 TATTCTTTCACGTCGGCCTTCTCCGCCCACACTGACTTCATGCAAAGGAGGAGATGCCAT Gene BVT0102_237035 - 1 EMBV3_00970 GK000019.2:27500095-27529096 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03496 CTATTCGGATGAAGTAGCTGGGGCTCCCATGATTGTGGTAGTTCCTGGGCATTCCCTCCT Gene GeneID:280826|IL6:NM_173923:2_cdna Constitutive 0 NULL GeneID:280826 4 GENE IL6 NULL interleukin 6 (interferon, beta 2) EMBV3_27485 AAAACGATTGAACACCAGATTGCAATTCAGTATCTTCAGATGAAATGGCCACTGCTTGAT Variant GeneID:540481|TCF7L2:NM_001143739:72_cdna 70^156 1 EMBV3_17450 GeneID:540481 26 GENE TCF7L2 TCFL2 transcription factor 7-like 2 (T-cell specific, HMG-box) EMBV3_35675 TGCGTGCCCGCGCGCCTGTCGCCCATCTCCGTGCTCTTCTTCGATAACAGCGACAACGTG Gene GeneID:508576|GDF1:XM_002688525:104_cdna Constitutive 0 NULL GeneID:508576 7 GENE GDF1 NULL growth differentiation factor 1 EMBV3_22358 GTTACTTTGATCCCCAAACTGGGAAGTACTACGAGTTGGTATAACGCCTGCTTCCAGGGC Gene GeneID:534800|LOC534800:XM_002697057:539_cdna Constitutive 0 NULL GeneID:534800 22 GENE LOC534800 NULL hypothetical LOC534800 EMBV3_06694 TCTTGTGGAGCAAGATGAGGTTGGATGAAGTTGGTGTTGAAACCCTAGGCAAGCTGCTGG Gene GeneID:787671|LOC787671:XM_002707693:446_cdna Constitutive 0 NULL GeneID:787671 15 GENE LOC787671 NULL similar to Hemoglobin subunit beta (Hemoglobin beta chain) (Beta-globin) EMBV3_12253 GCAGTATGACTTCTTCTCCCACCCCTTAAGATTATTCTGAAGCCTGTCCTGGGTCTGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03473 TCTGCCCGGCTCTGCCTGGAGGTGCCGCCCATTGATCGTGTTCTGTGTTGAAGATGTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10069 CCTTAAAGAAGAAATGGGTGGAGTTCAGATCTCTGCAGTTACAGGAACAGCGCCTGCTTC Gene GeneID:540450|CYTIP:NM_001102243:139_cdna UTR3_Alt 2 NULL GeneID:540450 2 GENE CYTIP MGC179355 PSCDBP cytohesin 1 interacting protein EMBV3_15172 GGAGCGTCCTGGGGATCGCCCCGCGCGCAGGTCCAGCGTCGGAAGTGGAAGCTACAGCTG Variant GeneID:100139115|SURF1:XM_002691662:409_cdna 151^284 4 EMBV3_16704 GeneID:100139115 11 GENE SURF1 NULL surfeit 1 EMBV3_38406 TCATCCTAGGCATGGGCTACAAAGAAAACGCCAGTCAGGCAAGGGATTTGTTATCCAGAA Variant GeneID:539941|MAPK8:XM_002698955:75_cdna 679^933 1 EMBV3_19935 GeneID:539941 28 GENE MAPK8 JNK1 mitogen-activated protein kinase 8 EMBV3_21880 GGAAAACGCTCGATTGTTTCTCGCTAAACACCAGCACACTTTTGTTTACCCTGCGACCCG Gene GeneID:513821|FBXL22:NM_001046156:55_cdna Constitutive 0 NULL GeneID:513821 10 GENE FBXL22 MGC128609 F-box and leucine-rich repeat protein 22 EMBV3_19182 AAAGAGACTTGTGGTTGCCAAGAGGGAGAGGGTTGAGAGAAGGATAGAGTGGAAGTACGG Gene BVT0101_056374 + 0 NULL GK000021.2:52765142-53268742 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121511 TCONS_00121512 1 XLOC_073423 NonCoding TCONS_00121511 XLOC_073423 NonCoding NonCoding - 21:53018751-53020535 - TSS90499 1784 2 TCONS_00121511_4 61 0.238789237668161 1 0 0.00011654912675412 1.73217477509674e-08 0.00010474171949298 5.23594107541345e-05 0.000314324818773965 7.45317778046521e-62 4.47230080714306e-05 2.17196904100106e-05 0.000260668926714435 5.19708192519609e-06 7.95094332687636e-21 1.1197361349661e-34 3.54479989344596e-06 6.73627232461647e-45 4.16190554239478e-45 0 0 0 0.000198453196163735 0.000678185389222586 8.3098364398197e-05 0 0 0 0.000386388580166899 0.000441205787409919 3.72407374162437e-07 0 0 9.5714354324025e-11 NM_001105444.1 DUPD1 Bos taurus dual specificity phosphatase and pro isomerase domain containing 1 (DUPD1), mRNA. 1e-47 196 76.01 0.172085201793722 NM_001040061.2 C3orf72 Homo sapiens chromosome 3 open reading frame 72 (C3orf72), mRNA. 1e-16 93.3 74.00 0.0795964125560538 0 noncoding 0 0 0 0 -0.39379967145288 0.0207748235424359 0.0187572745587672 0.819823562988419 TCCAGAGTTTCTAATTCCTGCACAAAGACTATCACCATCTCATTATCAAGACATTAAAGACACCTGTGAGCAGTTTGCAGCGTGGGCAACAAATGATCTTTTTAACTGAATACATTTTAATGGAGAATTTACTGCTGATTAAAACCACCTTTCAAACATCCTGCAAATAAGAAAAACTGATGGAAATGCAATGAGGCCAAGGTTAAAGGTGAACTAAGACTTTTATCAATTATGTCAGTTTAATGGTTAAAATGCATGAAAGTGATGAGACATTCATTCAACAATGAGTTTATATTCTGTTCACTCATGCAGCTATTCTTCATCTTCTAATGATATGCTATATTGAAAATAATTATAAAAGACAAAAGATAGTTTTAGAGATGAAAATAAAGCAAACAGGTAGCTTTCATTGTGTAGCCCAGATCCATAAGCGTGAGGAAAAACAATCTTCTTAGGAATGTCGGCAATCTTTGCTTTCTGGTTCCTGCTTTCCCGAACAATTATACATACTGCTATTTTTTTTTATGTGTTATTGATTTTTATATTTACAGTTTAGACAGTAAGTGCTATGTAATTATCAGAATGGAACAAATACAAAATATCTTAGAAAGGCATTAAAATATCAAAAATGCATTAGTTAATGCAATTGAATGATTCAATTCCATACACAGACATGACTACATGTTGCAGAACACATATTAGTTCCCACATCAGAGACTAAAATATCTGATGTTCAAATCCCGACTAAGTCCTCTGGGTCAGTGGCACAACTTAGTTAAGGTCAGATTCCAATAGTCCCATCAAGAACCACTTTTAATTATTCTTACAGCAGCATTTCTTTCTTTCAGGCACTCTTGTCCCCTTCTCATTAGGTTTCACTGATTGGTAATAACTTCACTCATCAGGAATTGTTGACTGTACATCCGGATCAATCAAAGGTCAAACTCACAGAGATAACTTTCTTAGTGTAATATTCCCCTAAAAGTTTGGTTTCAAACTTGGATGGATTCTATTCCTATAACTGTACTTTTCGGTCCTTTGAAGTTCATCAGAATCATGGAGTCTTGCCAGAAGTATATTATAATTTCAGTAAATTGAGGATTTGGGAGTTTGTATCTTACCTAACTTCACTGAATTTATTCATATAACATATTAATAATGATTTGCTACTTGTAGTTTAAGCAAGAGGCACTTAATGAGCCCTTAATATATCTAGGTGCTCAGATTCTATATGGAATATCTTATTTAATATTGATAATATCCAGCGATGAAACTGTTATTCTGTTTATATGAAACAACTAAAGGTTAAAGATCTAAGGAGTGAGTATTATTCAGCCTTAAAAAAAAGCAAATTCTGGATAAAGAAGATGCAGTCTGTATATACAATGTAATAATACTTGGCCACAAAATGAATGAAATAATGCCATTTTCAGTAACGTGGATTCAGCTAGAGATTATCATACTAAGTGAAGTAAGTCAGAAAAACAAACAGCATGTGATACAACTTATATGTAATCTAAATATGACACAAATGAATGTATCTATGAAACAGTCATGGACATAGAAAAGAGACTTGTGGTTGCCAAGAGGGAGAGGGTTGAGAGAAGGATAGAGTGGAAGTACGGGGTTAACAGATATAAACTATTACACATAGAATGGATAAACAATAATGTTCTGCTATGTAGCAGAGGGAACTATGTTCAATATAGTGTGATAAACCATAATGGAAAAGAAAGTTAAAAGAAGAATGTATATTTATATATATAATGAATCACTTGCTGTAC TCONS_00119694 TCONS_00119695 TCONS_00119696 r 3' 923668 TCONS_00119694 TCONS_00119695 TCONS_00119696 r 3' 925451 EMBV3_18221 AACAATGAATTTCACCTTTTTCAAGCGCACATGGAACCTCCTCCAGGATAGATCACATCC Gene BVV0102_004837 + 0 NULL GK000010.2:89248200-89365865 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14707 TGGTGACCCGGAGCGGGAGACTTCTTGGCATCATCACGAAAAAGGATGTTCTGAGACATA Gene GeneID:511699|CLCN4:NM_001031757:62_cdna Constitutive 0 NULL GeneID:511699 X GENE CLCN4 NULL chloride channel 4 EMBV3_29797 GGAGTTCTTGCCGGCCAACAATAGCAGTAAGACCGGAATGTGCGAGTCCAGAAGATCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05866 GGAGAAGTCTGTTCCAGACCGTATCACTTCATGTCAGCACTACCAGCGCTTTGCCAAAAC Gene BVV0102_381253 + 0 NULL GK000013.2:64626042-64630310 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42810 ACAGCGAGTATTTAATTGCCCTATTTTCTTTAGTTCTGCGGCGTGTGGCCTTGGGAGTCC Gene BVV0102_175538 + 0 NULL GK000002.2:90842992-90987007 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37916 CAATGAATTTCACCTTTTTCTCAAGCGCACATGGAACCTTCTCCAGGATAGATCACATCC Gene BVT0102_298757 + 0 NULL GK000026.2:11813476-12225424 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00098838 TCONS_00010367 TCONS_00037938 TCONS_00019963 TCONS_00019989 TCONS_00022064 TCONS_00166080 TCONS_00244651 TCONS_00224115 TCONS_00250553 TCONS_00229820 TCONS_00135549 TCONS_00129726 TCONS_00136829 TCONS_00165811 TCONS_00231277 TCONS_00197449 TCONS_00249014 TCONS_00031938 TCONS_00064816 TCONS_00198626 TCONS_00020176 TCONS_00198800 TCONS_00221437 TCONS_00177994 TCONS_00251889 TCONS_00148277 TCONS_00210178 TCONS_00023334 TCONS_00017462 TCONS_00117178 TCONS_00244653 TCONS_00048822 TCONS_00152648 TCONS_00198662 TCONS_00055859 TCONS_00244654 TCONS_00250261 TCONS_00222772 TCONS_00141422 TCONS_00056147 TCONS_00207067 TCONS_00254568 TCONS_00249913 TCONS_00107792 TCONS_00197973 TCONS_00032586 47 XLOC_131641 XLOC_142855 XLOC_059082 XLOC_005918 XLOC_021767 XLOC_010641 XLOC_010667 XLOC_012735 XLOC_100918 XLOC_150512 XLOC_137411 XLOC_153496 XLOC_139314 XLOC_081772 XLOC_078439 XLOC_083040 XLOC_100651 XLOC_140766 XLOC_119110 XLOC_151957 XLOC_018183 XLOC_039540 XLOC_120280 XLOC_010854 XLOC_120453 XLOC_134752 XLOC_107767 XLOC_154830 XLOC_090159 XLOC_128688 XLOC_014001 XLOC_009039 XLOC_071344 XLOC_028953 XLOC_092413 XLOC_120316 XLOC_033667 XLOC_153204 XLOC_136079 XLOC_085850 XLOC_033950 XLOC_125586 XLOC_157500 XLOC_152856 XLOC_063702 XLOC_119632 XLOC_018826 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_25132 CAAACCTGTACCAGTGTAAGCTCAGAGTCCTAACCACTGAACTGCCAGGGAATTACCAGC Gene BVV0102_076384 + 0 NULL GK000025.2:33372707-33414237 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31128 TTCTTAACTTCTTCCAAGGTTACCAGTGTTTGAAAGATGCGCCGAGGCCGCAAGGGGAAC Gene GeneID:788414|LOC788414:XM_002685804:704_cdna Constitutive 0 NULL GeneID:788414 2 GENE LOC788414 NULL similar to RNA-binding protein 35A (RNA-binding motif protein 35A) EMBV3_05177 GGCCCTGGGGTAGATAAATTCCACCTGGATGACAGATGAGTGCAGGTTAATGAACACAGC Gene BVV0102_066689 - 1 EMBV3_28965 GK000002.2:73168450-73293821 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05271 CACTTTGCTCAACGGGCCTATTTAAAGTACGCTGCATGAGTCCTTGTGGCTGTCTTTCAT Gene GeneID:509820|CD164:NM_001046041:17_cdna Constitutive 0 NULL GeneID:509820 9 GENE CD164 MGC134121 CD164 molecule, sialomucin EMBV3_23518 CAAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGATGAATTCTACC Gene BVV0102_096689 + 0 NULL GK000024.2:44294459-44756969 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209635 TCONS_00136862 TCONS_00250940 TCONS_00063064 TCONS_00152751 TCONS_00060450 TCONS_00196842 TCONS_00088085 TCONS_00238892 TCONS_00023027 TCONS_00031937 TCONS_00224115 TCONS_00023028 TCONS_00253241 TCONS_00197506 TCONS_00177939 TCONS_00162600 TCONS_00124128 TCONS_00115689 TCONS_00135700 TCONS_00249014 TCONS_00060448 TCONS_00254141 TCONS_00060447 TCONS_00141271 TCONS_00110347 TCONS_00250238 TCONS_00060451 TCONS_00251931 TCONS_00223458 TCONS_00039653 TCONS_00039852 TCONS_00210179 TCONS_00229877 TCONS_00056147 TCONS_00190575 TCONS_00060446 TCONS_00033237 TCONS_00122496 TCONS_00060449 TCONS_00198911 TCONS_00011865 TCONS_00252355 38 XLOC_128146 XLOC_083073 XLOC_153883 XLOC_037791 XLOC_092516 XLOC_036736 XLOC_118507 XLOC_052872 XLOC_145558 XLOC_013697 XLOC_018182 XLOC_137411 XLOC_013698 XLOC_156182 XLOC_119167 XLOC_107712 XLOC_099481 XLOC_075680 XLOC_069858 XLOC_081923 XLOC_151957 XLOC_157079 XLOC_085699 XLOC_066251 XLOC_153181 XLOC_154872 XLOC_136758 XLOC_023470 XLOC_023669 XLOC_128689 XLOC_139371 XLOC_033950 XLOC_116610 XLOC_019471 XLOC_074051 XLOC_120564 XLOC_007415 XLOC_155296 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_10135 AGCCAAGGCCTATGAAGTGCAAAGAGCCGTCTCGCTGTTCTCTCTCAACGACCCAGCTCT Gene GeneID:513625|LOC513625:XR_083924:341_cdna Constitutive 0 NULL GeneID:513625 18 PSEUDO LOC513625 NULL similar to rCG54282 EMBV3_17909 ATGCCCATCCGCAAGGACGACGAGGTCCAGGTGGTCATCACCAGGCTAAAACTGGACAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28383 CCTATATCTATGGCTATGTGGATGCTACCTACCGGGAAGGCATGACCAAGGAAGAATGCC Gene GeneID:510069|PSMB6:NM_001034369:66_cdna Constitutive 1 NULL GeneID:510069 19 GENE PSMB6 MGC128291 proteasome (prosome, macropain) subunit, beta type, 6 EMBV3_41757 CCGGCATCCTTAAGAAAACTCCTGGAATCCTGCAAAGATCTCTCCTTACTTGATGTGTCC Gene GeneID:535452|FBXL4:NM_001076059:5_cdna Constitutive 0 NULL GeneID:535452 9 GENE FBXL4 MGC139509 F-box and leucine-rich repeat protein 4 EMBV3_20601 ATGCTGGCGAAGCAAGACGCACAGCAAGAGCTTACTTAGTTGGGTGTAACCTTGACCGTG Gene BVT0102_294387 - 0 NULL GK000019.2:29352960-29489994 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096280 1 XLOC_057926 Coding TCONS_00096280 XLOC_057926 NonCoding Coding STX8 19:29468782-29470798 o TSS71578 2016 5 TCONS_00096280_6 59 0.23859126984127 1 0 0.000465669950864268 0.000129592861019264 0.000417715905858022 0.000230671309229622 0.000268777548128172 0.000198725246883144 0.000264201258545875 0.000185813404713297 0.000315057108522936 1.83683040040238e-05 4.54204928279153e-06 1.61241138667512e-07 0.000203525329368126 5.36666400996408e-05 0.000130807839655903 0.000406130885398762 0 0.000174242194877238 0.000426248917766563 0.000453210804803361 0.000215331751573009 7.36176515611193e-07 0.000332195404279638 1.6631582542087e-05 0.000362433320309786 0.000410635260233946 0.00014967578030492 4.76447138944428e-05 1.20402190697203e-05 6.85921014923962e-05 NM_001102497.2 B3GNT2 Bos taurus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3GNT2), mRNA. 2e-69 268 91.49 0.0927579365079365 0 noncoding 0 0 0 0 -0.0710278043776613 0.692226383411247 -0.0593599612602398 0.28125354038983 GATGTATCCATGTAAACATTTCCACCTCTTGCTAGAGTGGGAGGACAAGCAGTCTTATTTTAAGAAAGGAAGGAATCTGGGCCACCCAGATTTTTTCCACAGCTTGAGGAAGACCTGGTTTCCAAAATATTGCCTATAATCTCGATTTCTATTTTAAGGTCCGTTATATGTTTTACAGTGAATATGCTGGCGAAGCAAGACGCACAGCAAGAGCTTACTTAGTTGGGTGTAACCTTGACCGTGCAGGCAGCTCATGTTTTCTGTTAGCGCTGTGTTTACACCGAGCCCCGCGTTGCTACCTGTCTAGACTGCGGTGAAAGCAGTCCAGCAGCAGAACTTCGATGATGCTCTTGAGCCATGATTCTGCTCAATGCAGTTCCCAGAGTTTTGAACAATTCCTTTTCTCTTCCAAGAGACCCGTACCAGTAGAAACCGTACTTTTTTCCTCCCCGATTATGTAGGTTATTGAGATGTGACTTCTTCACCTTATGGTTCTTGAAGTGACAGTACCCCTGGTTTGGGAGGTTTTTTAGGTGGGGTATAAAAGCATCTGCCTCCAATGGGGGAGACCTGGATTCGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGAAATGGTAACCCACTCCAGTATTCTTGCCTGGGGAATCCCATGGACGGAGAAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAAGAGTTGGACACGACTGAGCGACTTCACTCACTCACTTCACTCATAGGAGGCACCTGTGTGAAGTCAGTTGTGACATCACCTCTACTTCCTACCAACGATGTCAACTATTAAAATCTTTTTATTTTTTTAGAAATTCATGATCTGATCAATTTGGGAAAATATATGTGATCTGTTACATAAAACTAATCCCTTAAATCTGAGTTTACAACTGACCTCAAACTGGGCCTCTCTTACCATCCCTTTCCTTTATCCATGGTTCATACCAAAAACCCAGACTTTGGTATCTCAGGAAATGGATTGTTACTGCCGAATTTTAAGCATGGTGAAAATGTAGCTTTTTAGATAAAACAATAGAAGATGTGAAAATGTATTTTCTCCAAGTATCATCCTTATATGTCACCAGAGAGGTTGGTTTAGATAGTTGCATGATTTCTAGTATTCAGTTATTTACCCAGTAAGTTTCAAATAAAAGTTTAATTTCAGTGAACAATTGAGGCCTTATTTTTAACACAATTAGGGCATTCTGATATGTTCAGTTTGTAACTTTACCCTCCGTCTGGTATGGTTTGTTACTGCCCAATTAGTTTATTATGTAAGGAATTTTTATTTTATCAAAATCCACAAGTTTTAATATATTGACCTCAAGTTAGCAGAGCTGTTTTCTCTACCAAGTGCTTGGAAGTCTGCACATGGGCTCGAGGTGTGCAAACTCATTTTAGTATTAACCTAAATTGTATATTAGAAACATAGCTAAATATTGTTTCCTGATTTAATATTAATAACTGTATTTGCTAATAGGTAACTGATTATTACTCATCTTATAATGTGTGCATGTGTGCTAAGTCGCTTCAGTTGTGTCCAAATCTGTGCAACCCTGTGAACTGTAGCTCGCCAGGCTCCTCTGTCTATGGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCTCTCCTCCAGGGGATCTTCCAACTCAGGGATTGAACCTGTGTCTCTGATATCTCTTGGATTGCAGGTAGATTCTTTACCACTAGTGCCACCTGGGAAACCCCCAGACATAGCACATCTTATAATATTTATGTGCTAAACCTATGGTGCAAGAAGATATAAATTAATAACTTTTACTTCTATTAATAATTTCTGCTAGTTATTAATTATAAGGCATACCAAGCATGGTGCAATAATAATTGACTTTGTTCTTCTAAATGCTTGCAGTCTAACCACATTTTGAAATCTTGTGGCATCTGGTTTCGTGGCGATCTCAGAGTTTGCTGAATTAAGCACCAGACATTTAAAAACACCAAACCAAAAAAAAATAAAT TCONS_00096279 s 5' 0 TCONS_00096279 s 5' 0 EMBV3_36883 AACGACATGCTCGATGGCTAGAGACCCTCAACTCTCAACCCGAGATGCTTATTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_34031 ATCAATGAGGCAAACTCCTTTGCGCCCTGCTATTATCCCAAGCGGGTCCAGTTGTTACAC Gene GeneID:534933|SCRN1:NM_001110803:22_cdna UTR3_Alt 2 NULL GeneID:534933 4 GENE SCRN1 NULL secernin 1 EMBV3_42775 GACCTGATCTTCTGCTAGGGGAGGGAAGAATCAAAGGGACAGGAGAAAGAAGCTGCACTT Gene GeneID:537380|MAP3K5:NM_001144081:35_cdna Constitutive 0 NULL GeneID:537380 9 GENE MAP3K5 ASK1 mitogen-activated protein kinase kinase kinase 5 EMBV3_14007 CCATTGGGCAGGACAGGTGAGTGAGCTTGCTAGAGGATGGTAGAAGTCATGGTACTAGTT Gene BVV0101_031071 - 0 NULL GK000003.2:22120874-22310517 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27125 TGTAAACAGGTAACCAGCAGTGAGGACCTGCTTTTATCCCAGTTTATTTCTCCATTTACT Variant GeneID:613561|MRPS18C:NM_001046508:34_cdna 169^252 1 EMBV3_14675 GeneID:613561 6 GENE MRPS18C MGC136995 mitochondrial ribosomal protein S18C EMBV3_11962 GGGCCTAGCCTGCATATTAAAGACCTTACTGTTGCTATTTTTAGGTTTCAGCCCTTGGGG Gene BVT0102_139276 + 1 EMBV3_06791 GK000026.2:35047842-35050364 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150914 TCONS_00152222 TCONS_00150916 TCONS_00152229 TCONS_00152226 TCONS_00152225 TCONS_00152228 TCONS_00152223 TCONS_00150913 TCONS_00152224 TCONS_00152227 2 XLOC_091974 XLOC_092283 Coding TCONS_00152229 XLOC_092283 Coding Coding AFAP1L2 26:35047930-35192160 j TSS113581 6220 1 TCONS_00152229_4 761 0.0932475884244373 19 0.957005872605371 0.000930587319082688 8.69617670683702e-05 8.22770118261439e-05 2.9563256395269e-05 4.99474948027451e-05 8.88284234766305e-18 3.05331254569984e-05 0.000248186045848635 3.25848730988717e-17 2.94979621520626e-06 1.37617325484988e-15 0 2.02650056911255e-14 6.76647438280048e-05 5.91996285801612e-05 0.000230999199460356 2.53816419251442e-44 0.000106430029781887 0.000226411878580198 8.1007359906299e-39 1.11125594660447e-14 5.58217681710229e-06 0.000713514494859596 4.39202565278619e-08 5.39563710114971e-42 1.70333663214323e-74 7.14801550917123e-05 1.09931493163515e-65 2.5995568165156e-14 4.91935004613251e-47 XM_005225752.1 AFAP1L2 PREDICTED: Bos taurus actin filament associated protein 1-like 2 (AFAP1L2), transcript variant X1, mRNA. 0.0 6513 100.00 0.580385852090032 XM_005270239.1 AFAP1L2 PREDICTED: Homo sapiens actin filament associated protein 1-like 2 (AFAP1L2), transcript variant X8, mRNA. 0.0 3130 83.83 0.468006430868167 TCONS_00152229_4 sp|Q17R10|AF1L2_BOVIN AF1L2_BOVIN Actin filament-associated protein 1-like 2; 0.0 1544 100.00 0.998685939553219 1 coding 0 0 0 0 1.25058046238055 0.0241183053036512 -0.283786406246709 0.00108470018693996 CTGCTCGGCCACCCCTCCCCCCTTGAATCCCGCCCTCCAGCTGTTCCAAAAACACTTGAGTTCCTTGAACGCACCATGCCCTCTCCGCCTCTGCAGCTTTGCCAAGGGCTTGTCTTCTGTACGAGGTCCAGCTCTTCTAGGCAGTGGAGAGACGTGAGGACCTGGCCCCACGGACAGAAGCCCTGGAGCAGCTGCTGACAGAGCTGGATGACTTCCTCAGGATTCTTGACCAGGAGAACCTGAGCAGCACAGCCGTGGTGAAGAAGAGTGGCCTGGCCGAGCTTCTCCGCTTATACACCAAGAGCAGCAGTTCTGATGAGGAATACATTTATATGAACAAGGTGACCGTCCACAAGCAACAGAATGCCGAGTCCCAAGACAAAGCCCCCGAGCAGCAGAACCCGCTGACCAACGGTGAGCCCCCCCAGCCCTCCTCGGCCCCTCAGAAGAGTCTCCCAGACCTCCCACCCCCCAAGATGATTCCAGAACGTAAACAGCTCTCTGTCCCGAAGATCGAGTCTCCAGAGGGTTACTATGAAGAGGCTGAGCCGTATGACACATCCCTCAATGAGGACGGAGAGGCCGTGAGCAGCTCCTACGAGTCCTACGACGAGGAGGAGAGCAGCAAGGGCAAGTCGGCCCCCCACCAGTGGCCCTCGCCCGAGGCCAGCATCGAGCTGATGCGCGACGCCCGCATCTGCGCCTTCCTCTGGCGCAAGAAGTGGCTGGGCCAGTGGGCCAAGCAGCTGTGCGTCATCAAGGACACCAGGCTCCTGTGTTACAAATCCTCCAAGGACCACAGTCCTCAGCTGGACGTGAGCTTGCTGGGCAGCAGCGTGGTGCACAAGGAGAAGCAAGTGCGGAAGAAGGAGCACAAGCTGAAGATCACGCCGCTGAACGCCGACGTGATCGTGCTGGGCCTGCAGAGCAGGGACCAGGCGGAGCAGTGGCTCAGGGTCATTCAGGAGGTCAGCGGCCTGCCTTCCGAAGGAGCTTGTGAGGGAAGCCAGTTCACCCCAGATGCCCAGCGCCTGAGCTGTCCAAAGCCAGATATAACGGAGAAGTACCTGTCAGCCTCGGAGTGTGGAAGCCCCATAGATGGTCACCCTGAAGTCCCAGAGACCAAAGACGTCAAGAAGAAATGTTCTGCTGGTCTCAAACTGAGCAACCTGATGAACCTGGGCAGGAAGAAATCTACCTCGCTGGAGCCTCCGGACAGGTCCCTCGAGACATCCAGCTACCTGAACGTGCTGGTCAACAGCCAATGGAAGTCACGCTGGTGCTCCGTCAGGGACAGTCACCTGTACTTCTACCAGGACCGGAACCGGAGCAAGGCGGCCCAGCAGCCCCTCAGCCTGCTGGGCTGTGAGGTGGTGCCGGACCCGAGCCCGGACCACCTCTACTCCTTCCGCATCCTCCACAACGGCGAGGAGCTGGCCAAGCTCGAGGCCAAGTCTTCCGAGGAAATGGGCCACTGGCTAGGCCTCCTGCTCTCTGAGTCGGGCTCCAAGACAGACCCGGAAGAATTCACCTATGACTATGTGGATGCCGATAGAGTTTCCTGTATCGTGAGCGCTGCCAAAACCTCTCTGCTGCTGATGCAGAGAAAGTTCTCGGAGCCGAACACTTACATTGACGGCCTGCCCAGCCAGGATCGCCAGGAGCTGCTGTACGACGATGTGGAGGTGTCAGAGCTGACAACCGCGGGGGAAGCCCCCGAGGAAGCCACCCCTGCAACAGATGCTCCGGGTGAGCCTGACCCTGACCGTGTGTACCTGGACCTCACGCCCATCAAGTCCTTCCTACACGGTGACAGCGGCGCCCGGGCCCCTTCACCCACGCCGCCCCACCAGGACCCTCCGGCCGAGACTCTCCCTCTCCCTGAAGATTCGGACCCCGCCCCTGATGAGCCCCTCATAAAGTCTCCAGAGAACCCCGAGTTGCAGATGCAGCAGGAGAGTCAGGAACCTGAGGAGCCCTCCCTGGGAGGCACAGAGGTCAAGCTCCAGGCTGGACAGCAGAAGACCTCCCCTTCCCCAAGCTGCCCTGACACGGTGGCTGTCACCCCGGCCGGGTCCAGCCCACCTGTGAAGGACAGGCTGAAGGCAGCCAGTCCAGAGATCAAACTTGGCAAGAACCGGACAGAAGCCGAGGTGAAGCGGTACACGGAGGAAAAAGAGAGGCTTGAGAAGAAGAAGGAAGAGATCCGAGGGCACCTGGCTCAGCTCCGGAGGGAGAAACGGGAGCTGAAAGAGACCCTGTTAAAGTGTACAGACAAGGGGGCGGCGGCCAGCCTGGAGCAGAAGCTGAGGGAGGTGGACGAGGAGTGCAGGGTGGAGGAGCGCAGGCGTGTGGACCTGGAGCTCAGCATTGTGGAGGTGAAGGACAGCCTGAGGAAGGCGGAGGCCGGGCCCGTGACGCTGGGCACCACTGTGGACACCACCCACCTGGAGAGCGTGAGCCCCCGGCCCAAAGCGGCCACCCCGACTCCTGCCCCCGACTGTACCCCGGTCAACTCCGCAACTGCGCTCAAGAACAGGCCTCTGTCGGTCATGGTCACGGGCAAAGGCACCGTCCTCCAGAAAGCCAAGGAATGGGAGAAGAAAGGAGCAAGTTAGGAAACGAACTTCATCTAAAGACTCTCCTGTCAATATGGACCTTGGTGACAATCCTGCTTCGTAACAGTCTTCGTTAAAGCAGCAACTCTGTAAAAGGGTGAGTCTGTTTACAAGAAAAAGGAAGAACTGGGGTTCTGTGAATGGAATACTTCGGCTAAGAGGAGGCTCTGTCCCTGTGCAGGGCCAAAGGAAATAATACAAGACTCTTGGAGACCCAAGTCTATTGGTTGTAAATAGGACATTGCTGTAGTTAGGGGTATTCTGTGTTTCTTCCTTGAAATTTTCATCAGTTGTTTTATCAGACTTTTTAAATGAAAAGTTTCTGATGTGGAGGCCTTGGTGGAGGAGAAATCGAGGTAGCAGGGCCTTGTCTCACTGATCACAGGGCCTTGGTGAGAGTATATCTCAACTCCTGACCGTCATCTCCTATCTGATACTTAAGCAGTGTCAGGGGTTAAATCGTCCTTGTCTTCAACTGTGTAAAAACCATCAATGGTGTTTTTTTTTTAAAGAAATGGTAATTGGGAAAATATTTGGGACCAAACTGAGGCACTGTTCCTGGTAAATTAAGGACTTTTTTCAGGCTAAAGTGGGCCTGAACCAATTGCTTTTAAATAAAAATTTTAAATGATGCTGTATTATATAGGGGGAAAAAATGTTTAAAATCCTGTAATTTAGAACAGTGAAAAGTGTCTTTTGCGATTTAACTGACTTTTTACATTACTATAGAAACAAGATTACCCTGTGTTTACAGATTCAGTCCCATGGAAAGGCCATTTTTAAGAGAAGAGTTATTTAATACAGTGCTCTCTTAGTCCCTGTTTTTTGAAGTTGTGCTTGATGTCCAGGCCCTTTCCAAGAAGAAAAAAGGGGGCAAATTTTGTTTCAGGTGGTCTCTTTTCTTAAAATCGACAGTGCTCTTGTTTGTGTTGCCTGTTTCTCTCCCGATGGCATTGTTAACACAGGTTAAAACATTTCATCTATCATCTCTGCCTCACTTCTGGGGGTTCTGAATCAGCGTTCTTTAACACTGGTTCCTGGGAACTAAAGGGCCTTCGAGTCTGCCTTGTCTTTCTATTCCCAGGGCATTTATTTCCTTTGTCATTAACACTTGGCGTCCCAAGTGGTGAGTTAGTTAGATTTTTTTTTTAATAAAATGTTCATTGTATTTTGGATTTTCTTGTATTTCATGGGATGACGTGGCAAGGCCTGGTAGACTTCTACTTCAAGGGGAAAACATTGTGGATATTTATACACTGAACTTCAAACTCTGTGAGTCAAAACATAGAATTACAAGGTGGGATCCTAGCAGGAGACTTTAAGCCTCCTTACATCAAGTAGCAGAGGTAAGGCTGAAAGATTTTATAATTATAATTAAGACTTGGGAAACATCTTTAGAAACTGATCATATATAAAAATGACTGAAAATCAATACGTTTAAACACACTCCTAGATAATTCTTAGGGGAGTAAAAATCATATCAATACTTGAAATGTTGCCTTAGTAGTAATAATTAAAAATGACAAAACCAAATTTCTGACTCATTAAAAAGACAGCCTACAGCAATAGTAAATGGCAGAACTGAAAAAAGAGGCCTCAAGTACCGATACTGACAGTCCTTTTGAATTACAAGAAAATACTATGAATATAGCAGCTTGAAAGTTTGAGGACTACATATTTTCATTTGAGAGAGCATAGCTCTGATACCAAAATTCCAACACATAAAAGAAAAACATTCCAATATATTATAAAAGACAATCATTTTTGAACATAAATTGAAAAAAAACTTTAAAATATTGGCAAGTGGAATTCAGCAGTGTTTAAAGAACCAGACATTGCAACCAAATAGCATTTATCCAAGAAATCAAAGGTGGTTCAACAAGTGAAAAATACAGATAGACATTTCATCATATTAACGAGTCCAATGTGAAAAAACATCTCAAAGGGAGCAGCAAAGCAAACCACAAATCTCAGTACTCCTAATAAACACTCTAATCCAGGAATAGAAGCAAGCATTCCTTATCAAGTAATGCACAGAGAGTAGCAATGACAGAAACATCCTTTCAAGTCAAAAACCAGCTACGTTCCACTACTTGTTAAATCATCATTCTGGAGGTCCTAGACAAATGCAAAGTGACAAGAAAAAGTAGTATAAAATTTCAAAAGGAGAGACAAAACTGTCATTACTTGTAAATGCTATCTTTCTAGAAAAGCAAAAACTAGAGCAGCTGGCTGGAATAAGGATCATTTGGAGAAAATAAAAGATTTATGATCTATCGGCAATGTTTAAGTTTTTACAAGGAGAACATATTTGTATATTACGTAATTAAAGTAAAAGCCAGTTTCTTTAAAAAGAAAGAAAAAGGGTTAGCTGGGAAAAGATCACTTAAGGTTATCTTGTCAGGAATTCCCTCTTTCGCTACTAGAACCCAGAAAGGGTTAAACTCCAGTGGCACCTTGGCTAGAAAAGGTTAAATTTCTTTTCCCCCAAGGGCTGAAACCTAAAAATAGCAACAGTAAGGTCTTTAATATGTAGGCTAGGCCCAGGGCCCAGTTTTGTGCGGTTTTTAAGTCCAGTTCAAATGGGACATCCAAATATCAACCCTGAGCCAGACAAAGAACCTATATTATGAAATGATTAAACTGCTGTTAATGTAAAGACAATGGAATTCTCTAGCAGCTATCGGCACCTACCGGGTGGGCACGTGACTCTGCTCTGATATTGCTTTTGCCTTGGCAGAAGGCAACGACTGGAATGGAAATAGCCCTTGAATGGAAATGACTGTCATGCACAGTGCTTGGCACACTGGACTTGTTTTTAACATCTAATAAAACCACGGTGATGACCTTCCAAGTACTTTTCTTTGCACCACAAATCCTGAAGTTCTTAAGCAGTATTTAAATCAAAGTAGCCGTAGCCGTGAATGTTTGCCCATAAAACATCACATTAAAGGTATTTACATTAAAAATAAAAACTATGATAAAGTGTCTGGATTTAAATCAGAGCTCTGCAAAGGCTTCTACTGAAAACCAACTCCCAACTCGACCACCTGGGCAGAGAATTGATTTGTTAAGGACTGTGGGATAAGCAAATATCCAGTTCGCCGGAGAATATGCTATCTAAGCCTTTTTGCCATTTAGGGACAAATGCTCCTGTTAAATAAACACAACCAACATCACTTCTTGAAATATTCCTTTTAAAACCAGGTATGAAAAACAAAACTAAAACCAAGGCAGCATAAGATCTCCATCTAAAAAAACCAACCCCTTCAAATCTCTTTGTTCTACATGGACTGAGTTTAAGAATTCTGCTCCTTTTTGACCCCCAAAGGGAGAGTAAGACAGGCACTCAAGAAACACCCCACAATGAACCCTCCTAAGTAAACACTAAGAAGCCTCTCGAAGGGAGTGCTGGTCAGCTTAGGTGGCCCCTCGAATCCAGGGCTGTCTGCACACTCAGCCCCTCCCCCTCAGGTAAAGAGCTGGTCAGTCTCCTTCCTGTCTGAGGCCTTTCCAAGTCCCACACAGCGATCCCGTCCCAGAACAAGTCACAAATGCCGCTCAAGCCCCTCTTCAAACTAAAGAACGAATCCATCTGGAGC EMBV3_03919 CAGGGCTGCCCACGACATGCAGGATCACTCTTCTGAAGTTCTCCAACAATGAAGTGCTTT Gene GeneID:281805|GSTA1:NM_177515:207_cdna Constitutive 0 NULL GeneID:281805 23 GENE GSTA1 GSTA2 MGC140407 glutathione S-transferase alpha 1 EMBV3_00080 AGCAACAGCAAGAAGCAATGGCAGCAGCACATCCAGTCTGAGAAGCATAAGGAGAAGGTG Gene GeneID:534109|ZC3H7B:XM_002687943:19_cdna Constitutive 1 NULL GeneID:534109 5 GENE ZC3H7B NULL zinc finger CCCH-type containing 7B EMBV3_28304 TTCTTGCTCTTAGACGAGCTGTTCTCCTTCTCCTTTTTGGAGCCCGCTACACTGCGGGAT Gene GeneID:100336129|LOC100336129:XM_002690873:277_cdna Constitutive 0 NULL GeneID:100336129 10 GENE LOC100336129 NULL hypothetical protein LOC100336129 EMBV3_43352 GTGAGTGTGTGCATCCGTGACCCGTTGTGACTCCTGAGCGTGCACAGTCTTCTAGAGTAA Gene GeneID:517040|GABBR2:XM_002689734:97_cdna Constitutive 0 NULL GeneID:517040 8 GENE GABBR2 NULL gamma-aminobutyric acid (GABA) B receptor, 2 EMBV3_19485 CCGTTTTAACCGTCTAAGCACCCCATGTGTTACCTCATGTGCCTGAGTTTCTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_12198 TTGTCATTTGGTGCTTAGTCTTTGTAAGGGCTCTCTGTGGTTTGACTTGCCCCAGCTGCC Gene BVT0102_246905 + 0 NULL GK000001.2:35604242-35655399 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003086 TCONS_00003087 TCONS_00003085 TCONS_00003082 TCONS_00003083 TCONS_00003084 1 XLOC_000784 Coding TCONS_00003087 XLOC_000784 Coding Coding CGGBP1 1:35653472-35660555 = TSS1609 4619 1 TCONS_00003087_4 167 3 0.348206721265179 2.11891783387616e-05 0.0024228434023027 1.28291829435109e-07 0.00190459247360724 0.00220235034997499 0.000469446373804185 0.000507507853766991 0.0013950435568116 0.00297826582921135 1.84100476339451e-06 2.34764221180377e-09 4.44606100613581e-05 0.000247699044901253 9.55216512281446e-05 8.78211232197818e-06 0.000706622841790274 0.000262179333310215 3.73660806381232e-11 2.268550193234e-08 1.66017494320153e-07 7.07062395529357e-05 5.90138589828165e-08 1.99489012808621e-06 0.000583617946910374 0.000361861813967169 0.000723504450573144 5.22294465480743e-05 0.000116423296061228 3.68248197637735e-10 3.77839736572106e-07 XM_003581673.2 LOC100851231 PREDICTED: Bos taurus CGG triplet repeat-binding protein 1-like (LOC100851231), transcript variant 1, mRNA. 0.0 8017 99.93 0.96427798224724 NM_003663.3 CGGBP1 Homo sapiens CGG triplet repeat binding protein 1 (CGGBP1), 0.0 4504 82.73 0.965576964710976 TCONS_00003087_4 sp|Q9UFW8|CGBP1_HUMAN CGBP1_HUMAN CGG triplet repeat-binding protein 1; 2e-123 349 100.00 0.994011976047904 0 coding 1 1 1 1 0.0304126941128364 0.787175264814766 0.0109193145132547 0.899739691192577 CGGTTTTCATTGGAGGATGCTAGCCGCCAATCATGCACATGTCCGCCCTTCTACCACTATTGGTCAAATTTGCCGTCTGTTTGATAGACTTGGAGTCCGTTGGTCAATGTTGCTCGGCGGTTGCTGGGGGCCGCCTACGAGCTCTGCCACTGGCGGCACAGGAGGACGGGGCGCGGCGGGGGACACGGCGGCCGCCGCGGGGCTCGTTCGTGCAACAGCGGCGGCGACGGCGGCGGTGGCGGCGGCGGCTGGTCCTCCTCCCTCTCCCTATTGCTCCTCCTATTCTTCCTCCTCCTTTCCTTTCCGGCCGTGTATCGTCCACTTCCCCTAGCGACGGCCCAGATCCTACGTAAAGGCATGACTTCCCAGCACCTCAGGGAAAATAGGGTGCAAGCCCAGAAACTGTTTCCCCATCACCACTTGTTGAAAAACTGATTTGAAGGCATATCCGGGTTTGAACAAACGGAAAGTGCCAGGATTTAATGCGTCTTTGGTTTTGCGCTGGAGACCCTTCACTGCTAGGTATCAAGACGAAAAAAACTGGAAACTCATCCGAACCCCATTCAAAGTCAGAATGGAACGATTTGTAGTAACAGCACCACCTGCTCGAAACCGTTCTAAGACTGCTTTGTATGTGACCCCCCTGGATCGAGTCACTGAGTTTGGAGGTGAGCTGCACGAAGATGGAGGAAAGCTCTTCTGCACTTCTTGCAATGTGGTTCTGAATCATGTTCGCAAGTCTGCCATTAGTGACCACCTCAAGTCAAAGACTCATACCAAGAGGAAGGCAGAATTTGAAGAGCAGAATGTGAGAAAGAAGCAGAGGCCTCTAACTGCATCGCTTCAGTGCAACAGTACTGCGCAAACAGAGAAAGTCAGTGTTATCCAGGACTTTGTGAAAATGTGCCTGGAAGCCAATATCCCACTTGAGAAGGCTGATCATCCAGCAGTCCGTGCTTTCCTGTCTCGCCATGTGAAGAATGGAGGCTCCATACCCAAGTCAGACCAACTGAGGAGAGCATACCTGCCTGATGGATACGAGAATGAGAATCAGCTCCTTAACTCACAAGATTGTTGACAAGGAGGTTACCACCATTGTGATCAAGATAAATAATGTGGAGTATTAAAAGTTATGTGTTGATTGTGTGGTTCATTTTTATATTTATTTCATTTTAAATCATGTGATGCAGAATAGTTTTGCAATGTATATACAGTGGCAGGCAAAAAATTAAAAAAAAAAAAACTCACTGCAAAATGTACTGTTAATTTTAGTCACCAATGGTGTAAAGCAAAACTTAGGGTTTAGAGTGTGCTAGGATACCTGGAACCTGATGGTTATCTTTAAAATTGATGGTTTTTCTCCTGAAATGTTTGTGCATGGAAGAACTGCCCTGCTTTTTTACCCTGTTGCCATGTATAATTATTCCTTGTGAGATTACTTAATTACTTGGATTGACGACTAGCTTAGGAAATTGAAGCTGCTGCCAGGCAATACCACTCACAGTAACTTAAAGAAATTATTTCCCTGATTAGAGGATCCTCAAAAAAGAAGGGAGGGTGGGAAACTATTCTTACATCTTCAGATTCCTAGCAGAAAAAGACTGTTTATTGCAGACTGTGCTTTACTTGTATATGATATAGTTACCTTAACTATCCTTCAGTTCCTCACTGTCTTTATCCCCCTTTTTTTTTTTTAAGGCTTCTTGTTGTATTTAGTAGCAGCTTCAAGTGACCAAAAGACTGAAATCTTACTGGCAGTGCCAAAGCCACTGGGAATTTTGCAGTGATACGATTTTAGTCTCTAACTATAAACAGATTTTTGAAACATAGCTTTCATTTCAAGTGTCATCCTTAATTTGCAGACTTCTTTTTTTATGTCATGGTATTAAAAAACTTCAAGATTGGCATTTTAATTTAAACAAGTAGATGTTCTATGATTGAGTTTCCTGTTTTTACAGAGAATTAGCAATTACTTTTTGGCTGACAAATCAGATAATAAGGAGATTACTTTTTATGCGTTAATTTTCCATATGATTTTATAAAAGTTTAGATAAATAGACTAGAAATAAGTGTACTTACTTTCATTTCTATGTGCTTTGCCTCTGGTGGTACAAGGTTTTTAAACATAGATGATAAACCATTGTCTAGAAATACTGGCAAGGTTTTTTTGTAGTGGCGATCTGGCAGTATCCTGCATAACTGTTTGGGTGAGGAAATAAATCAGTTCTGTTAAAGGTCAACCATGTTCAGGAAATGAGCTCTATCTGAACTTCACTATCCTGTAAGGTTATTAAAGTAGCTTAGCCCAGTTGTCATCTTTGTTGGATACCCAAAATATATTTTTTAAAAATTGAACAGCGGAAAACTTGGACTAGAGCTTTAAGAAAAAAGTCTTAAATTCTTTGAAAACATTCAAGTTAAAAGGGTTTATAAAATATATTTCTATTAAAGCACTGATAATTGATGCCCTATGTGATGTAGAGGGAGCTATCCTTGAGATCATTTTACCGCAAATCTTCATTTTAAAAAAGCCAAAGTGAGTAAGAAAAAGATGTTTTTCAGAAACAGCTTTCTATATCTTTTTTGGTAGATTTAAGTTCCTAGTTTGGATTGTCAAAGTGCCCATCTGATTTTAGATTTATGTGAGGTTTTTTGGTTGTTTTTAAACAAGCCTGCCACCAAAAAAAAAAAATCACTTGTCAAAATTTGAGCTACCAGATTTTCTCATGTTCAGTTACGTTAAAGTAGCACAATTAATGCCCAGAATAGTGCTCTCCTTGATAAAGCACATGCAAGAGGAGACCAGCAGCAAAACCTAACCAAAATGTACTTTGTTTTTACTTCCTCTAATAAAAGGTTTGCAGGCAACCATGTTTGATTTGAATTATCTAAGATGGTACAAGATCTACAAAGCTAGGAAAATAATTGAGTTTTATAGTGTTCTTTTTGGAATACAAAGATAAGGTTAGATAAACAATCATTCTGATTTTTTCAAGACTCATGAATCAGACAGCTCCCTATGTAGATGCTAGTTTGCACTGACAGCAAACACGTAGTGGCAGAACAGCTCTGAGTAGTCCTCAGCAGTAAACTGGAGGATGTACCAGAAAAACACCAGTAGTTCACATTCGAGTATTTAGTAGTTAAACCTAATTTGGTAGTCATTTAGGTCCCCTATAGTTTGATGTATTTCTCCAGGCTCCTAACTTTTCACACATTCACTATATCTAGAGGCATAATCTATCCTGTTAGAATTATATCATGTCCTTAGAAGCGTTTTCCATCCTGTTGTGGAGGTTTAATATGTTTCTTTACTGATTGTGAAATTTTTCGTTCCCTGAAACTGGTTAACTTTACTTCATAGTTAAATAGATAAGGCAGAATGATTGTGTTAGCCTGCTCAAACTGGTACAAATCTGTGAAACCATGGTTGGCATACGTTGGATAACAAACAATATCTAAGAGGCATATGCTGCAGTGGCGTGTAGTGGACATGTGTACAGACGCTTTCAATCTTAACTATAGTGTTAGTGTGATGCTATACTATTGGAAAAAAATAGCACATTTTTTTCTATTTTATAAGTTGTATGCATAAAGATAAGATTTGTTACGTTTCGTTTATAAACTGCCTTCAACACATGCTTACCTGTTAAAATAGCGTTTTCTCAAAGTATGGTAGTATGTCTTCCAGAATTTCACTATATGCTTACAGTAAATAGTTCCTAACTTGTTGAAATGTTAAATTCCTTATTGGTTTCTTTTGATTCTCTGGGGCATATAGCAAGCCTGAAAGACATTATAATCATTTCTTACAGGGTGAAAATTTAGAAAGATTGCGTATTGGAGCCTAAATAGTTATTTTATTCATTATCATCTTTGAGTAAGACTTCTTTTATTTTAAACAAATGCTACTTCCAGTTAAGGCATTTGGCCCTAATGACTTTTCAGGGACCAAAATACTTTAAAGTTCTGCATCTTAAAACTAACCAATTAAGTATCGGCTTGGGATTGTTCAGAAGTATTCATTGCTTAAAAACTATTGTAAGTGACAGTTGGCAAGATCTTCAAGCAGAAAGTTCCACAGTCAGATCTTTTGCCTGAAAAGAATCTGTATGTAAATGTTAATGGAAAATACATTTTAAAAAACTGTAAGGTGGCCCAAAACAAAAGCCACAATTTGTCATTTGGTGCTTAGTCTTTGTAAGGGCTCTCTGTGGTTTGACTTGCCCCAGCTGCCTTTAAATGAGTACAGATGACTTTCAAACATGTTTATTAAATAGAAAATTCATTCTATAATTTAATTGAGAATCTTAGCCTAAAATGTTTTGGCTTCTAGTCCACCCTGATTAAAATGTGAATAGTGAAGTGACTATCCTAAGCCTGGTTTATCTCAATCCATACTACCATAGATTTCTGAGGTAAATACAGTTCTTACGTAGTGGTATTCTACTTATATCCAGAATACTGTATTCATTAAAATTTTACTATGTTCATTTGTGTATTCCCTTGCTTATTTTTTTTGCTCATGCATGTATACTTACTATAAATTGTTGCTTTTAAAGTTTTGTCTCTGTGACTTTTAGAAATAAATTTCAAAAATTATTTCAGAATTTTTTGAA EMBV3_24809 CTTTCGAGGGGTCATCCTCCAGCAGCACCCAATCTTTCTGTCCACCCATCACTTCTAATT Gene BVT0102_156324 + 0 NULL GK000011.2:27204851-27260021 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39917 AAGGTGTGTCTGTCCTGCACGGAAATCGAGGTGTCTACCATGACGAGAAGCAGCCAACTT Gene GeneID:507299|LOC507299:XM_002696971:137_cdna Constitutive 1 NULL GeneID:507299 22 GENE LOC507299 NULL similar to glycosyltransferase 8 domain containing 4 EMBV3_05757 ATAACCTTTGCCTGTGGCGATTTTGTCTCCAGTGATTCTTCCTTCTGGCCACTGTGTTCC Gene BVV0101_019529 + 0 NULL GK000006.2:45231905-45629614 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09947 GAGGCGCACACTCTTTAACCTATTTAACTTACTGCACATCCCGGAAAACTTGTGGCCAGC Gene BVT0102_274475 + 0 NULL GK000030.2:68657931-68957212 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20728 AGCAAGCTCACCGCGAACCCCGTGGGCAAAGCTGGACAGAACAACAAGGCAGTGACCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30417 GACAGCAACCACAACTATGCAAGCCATCTCGAACTTCCGCAAACACCTGCGCATGGTCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32244 CTGGTGTGCATGCCATATGATCAGGACAGCTTTTCCACCTTACCTGGTTTTCCTACAGGC Gene BVV0102_087675 + 0 NULL GK000004.2:94737328-94765516 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36039 GACAGCTGCCTGTGAACCAGAAAACAGGACTGCACATGACTGAATCTGTTAGCGCTTTGG Gene GeneID:781090|LOC781090:XM_002688180:118_cdna Constitutive 0 NULL GeneID:781090 6 GENE LOC781090 NULL similar to ribosomal protein L10 EMBV3_15053 TGATTTTCCTTGGGAAGTACGTAACACATTTTGAAATTTAGAGGAGTCCACATGATTAAA Gene GeneID:617450|LRP11:XM_002690323:8_cdna Constitutive 0 NULL GeneID:617450 9 GENE LRP11 NULL low density lipoprotein receptor-related protein 11 EMBV3_41620 TCAGAAGGTGTTTATGAGGACATTGGAGTGGCTACCGCGGGGGAGAAAGACGAGGCTGCT Gene GeneID:100337455|LOC100337455:XM_002698502:601_cdna Constitutive 0 NULL GeneID:100337455 26 GENE LOC100337455 NULL hypothetical protein LOC100337455 EMBV3_43683 GCTCATTTTCCCCTTTAGGGTCTGCAGCCGCCATGGGATCCAACACATTCAGGAAGAACA Gene GeneID:616887|LOC616887:XM_002685201:48_cdna Constitutive 0 NULL GeneID:616887 2 GENE LOC616887 NULL hypothetical LOC616887 EMBV3_27742 GCACTGTGTATTTACCCTAGACTCTGTCTTCAACTTGGTTCCGCCTAAAGGCTCAGAACC Gene BVV0102_064394 + 1 EMBV3_02122 GK000022.2:56958163-56965858 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127570 TCONS_00127567 TCONS_00127566 TCONS_00127569 TCONS_00127571 1 XLOC_077677 Coding TCONS_00127567 XLOC_077677 Coding Coding MBD4 22:56948961-56960022 = TSS95383 4031 1 TCONS_00127567_3 554 0.28826593897296 8 0.63625678119349 1.50949956365721e-12 7.30853335809306e-09 0.000684579292098965 4.264841359043e-07 0.000458293861159566 0.000230650774134127 7.20648373569996e-09 0.000404329837658442 0.000135251475463834 4.45594275032147e-05 1.31708015961839e-05 7.68756037548488e-05 5.97503518525624e-05 5.10582206740442e-05 1.5531580184166e-10 0.000337028389169416 7.3201708633729e-09 0.000312317233805582 0.00102880759973504 0.00105459786571634 0.000303843717149679 0.000241521445176238 0.000526163478640307 0.000351046942250066 1.43364194865643e-09 0.000675360706755009 0.000269149375928179 2.67210667562043e-05 5.31611427821819e-30 5.52827274266433e-24 XM_005223058.1 MBD4 PREDICTED: Bos taurus methyl-CpG binding domain protein 4 (MBD4), 0.0 5241 99.93 0.721905234433143 NM_003925.2 MBD4 Homo sapiens methyl-CpG binding domain protein 4 (MBD4), transcript 0.0 1914 78.03 0.560406846936244 TCONS_00127567_3 sp|O95243|MBD4_HUMAN MBD4_HUMAN Methyl-CpG-binding domain protein 4; 0.0 779 72.70 0.998194945848375 1 coding 0 1 1 1 0.0845176264522961 0.516367234017469 0.02196277277458 0.702286718735428 GTCCGCGATTGGTCGGAACGGTGCGTCTTCCTTGACGAAGGATTTGATTGGCTGAGCTGCGGAAATAGCGGCTGCGGTCGAGGGGGCGGCCGGAAAGCTGCTGAGGAATCGGAAAGACTTGCACTGCATTCATCTGTTGGTTCCAGCCTAGCGCTCCGAACTGAAGAAATTTTCACCTCTTACTCCGCCGCACACCCAGAGCGACGCCCCCTCTCGCCCTGTTGCTGCCGCCGGAGCCCACTTGAGAGGCACGTCTAGGATGGAGAGTCCGAGCCTGAGGGACTGCGGAGCTGCCCCCTCGGTCGTCGACCGTGAGCGCCTAGTCCCAGACCGGCTGTGTGACCTCCGGGAGGAAGATGTTGCTCTGGGGTCAGAAAGAGTGGGAGAGGATGAAAAGCAAATGGTGATGAAAAGCAGCAGTGAATGTAATCTCCCTCTACAAGAGCCTTTTGCTTCTGCTCAATCTGGTGGGAACGCAATGACAGAGTGCCGAAAGTCTGTACCATGTGGATGGGAAAGAGTTGTGAAGCAAAGGTTATCTGGGAAAACAGCAGGCAAATACGACGTACATTTTATCAGCCCACAGGGACAGAAGTTCAGATCCAGAGTTTCACTTGTTAATTATCTTCACCAAAGTGGAGAGACTTCTCTTAAGCCAGAAGACTTTGATTTCAGTGTATGTCCTGAAAGAAGCATCAAGTCAGAATGTAAAGGCCGAAACACAGCAGCTCTGACATTCCAACTGCAACACCAAAGTAACAGTTCAAACCGGAACCTCAGGACACGGAGCATGAGGAAGAAAGATGTATTTCCCCTGCCAAGTGCTTGTTTGGAATTGCAGGATAGCGGAGAACTACCCAACTTGAAAGAAGATGAGGGTGTTCATGATATTGCCTCCAGAAAGGTTAGCAAGTCCAAAAGAAAGGTGACTGTTTTGAAAGAGATTCAAACTAAGAAAACAAAACCAGGGTGCCGCAAGAGTCTTCCTGATCCTGTCCAAAGTAATAGAGAATCTCAAAGTGAACCTGTTGCACAGGAAAGTCACCTTGAGGGAACTTGCTGCATCTCTGATGCCAGAGCCAGCGAACAGGCCCTCAGTGTGACCACTGAAGAGGAGAGGCTTGGTAAAAAAAAATCATCGTGTTTGGGACCAAACGGTGAACAGATCCCTTCTGGCATTGTAAGCAAATTATGTTCGGCCAAAGAAGTGGAACCCAACAATAAGTGTGAGGACCCCCTTTTAGAATCTGAGGAAATAAGAACCAAAGTAGAAGCTGCGGAGAGGAAGGAGCATTTGCATATGGACATTTCAGAAGGTGGCTCTGAAACAGACGACAGCTCACAAACACAGAAAAACCCTACGTCTGCGAAAGTATCTCAAGAAGACACCGTCCCACGGACACAAATAGAAAAAAGGAAAACAAGCCTGTATTTTTCCAGCAAATACAACAAAGAAGCTCTTAGCCCCCCACGACGCAAGGCCTTTAAGAAGTGGACACCTCCGCGGTCACCTTTTAATCTCGTCCAGGAAACTCTTTTTCATGATCCGTGGAAGCTCCTCATTGCAACTATATTTCTCAATAGGACCTCAGGCAAAATGGCCATCCCTGTGCTCTGGCAGTTTCTGGAGAAGTACCCTTCTGCTGAGGCTGCAAGGACCGCAGACTGGAGAGATGTTTCAGAATTTCTTAAACCTCTTGGTCTCTACGATCTTCGAGCAAAAACCATTATCAAGTTCTCCGATGAATATCTGACAAAGCAGTGGAAGTATCCGATCGAGCTTCACGGGATTGGCAAATATGGCAACGACTCGTACCGAATTTTTTGCGTCAATGAGTGGAAGCAGGTACACCCTGAAGACCATAAGTTAAATAAATATCATGACTGGCTTTGGGAAAATCACGAGAAATTAAGTCTATCTTAAAAACTCTTTGAAGTTTTCAGACTTGTTTTTTCTACATCGCTTTGCACTTTGATTCTTCAGAGCTCCATTAAGCACAACCACCTTTCCAGGCGTATAGATTTTAATCAGCCCAGCTACTACCAGCCTACTGTATGTTTTCTTAATGTGCGTACCACTGGTAGATCTTTGCTACTGAATGTGCTGGAACATGTTTTAAGAGTTTTTTGGTTTTTGTTTTAAGAAAAAATAAATTGTTATTTGACAACAATCCTAAAAATGTAAATGTATATGACTTTCCAATAATGAAATGTGATTTGAAGTTGGAAAAAACTCTCCTTAGTTACCGACAATATAAAGCAAATTTCTATCAACCTTATTTGAGGGAAGATTAGACGTTCTGCTCTCTTTCTGTAGAAAATGATACCATTGCTGTTTAGTCGCTAAGTTGTGTCCAACTCTGTGCAACCCTGTCTGACTGTAGGTCACCAGGCTCCTCTGTCCGTGGGGATTCTCCAGGCAGGAACACTGCAGTGGGTTGCCATTGCCTCCTCTAGGGAATCTTACTGACCCAGGGAGTGAGCCTGCGTCTCCTGTGTTGGTGGGTGGATTCTTTACCACTGAGCCACTAGGGAAGCCCTATTAATAAAAATATTTTTATTAAAAAACACCTTCTGTGAGGATGATCTGGCTGTGTCATCTGTCACCTCACTGACTGCTGGGGTTGATTTCACTGATTGGTTGGTTAGGCAAGCTGCACGTTCAGCTGAAGAGGACAACCTTCTCCAATCGAGGAGGACCGTTCTTTGATCAAGGATATATGAGTACCTGCACTCCCCTGCTAGGACCTCCAGACAAGCTCTCAAGGTCCATTTGTAGGAGAACATAGTGTATTCAAGCTTCCAAGACTCCAGACACATCCCCAAAAAAACGCCAACCCCCAAGGAAAAATAAGATTATTTTGTCATCGTGTGTGTGTGTGTTTATAGGCCCTTTCTTTCTATTCTTTTTTTTTTTTTTTTTTTTTACTGTACCAGGTCTTAGTTGCAGTATGTGGGATCTAGTTGCCCAACCAGGTATCAAACCCAGGCCCCCTTCATTGGGAGCACAGAGTCTTAGCCACCGGGGAAGTCCCTGTCATTATGTGTTCTTAAGGACTCTTGGTTGACTTTTAGGAATTGGAGATTTGACCCCGGCATCCATTTGATAACCTAGTGTGAATACCTGCCTGCAATTATGTTTCAGAGTCTTGGTTTCTGACTCATGTGTTCACTGTGATCCCCATGTGAAAACTCAAGCATTTACCCATCTCTCATCTTCCAGCTGGAGGACAGGACCTTTTTAGTTTTATGCCTTTTTTAATACAGGTATTATCATGGTATAACCCAAATACTAAAACATTTACTTTAGAAGGAACTCATAAATGAAAATCTAAGTTATCAAGCCTCAATTATCACTCATTTTAAGATGAGAGGGTAACAGACAAGGAGGCCAGGGGTTTCCAAACTGAGGAAATAGGCTGCAAGTGTCAGACATTTTTTATCTCTCTCTTAAGTGGCGGGAGGAAACAAACAAGTGTTAAGAAGCGGCGGGAGGAAACAAGTGTTAAGATTTTTCCCCTTCTCTATACAAATTTAAAAAGAGGTTTCTCTTAAAATTCTGTGTTGCCATAATGACACCTGGTTCCACCTGAACTGAACTTTTCTCAAATGCACTTTTCTTGCACTAACCGATGCGTTTTTCTTACGGATATATTTGTCTGGAGCTATGTTAATGCACTGTGTATTTACCCTAGACTCTGTCTTCAACTTGGTTCCGCCTAAAGGCTCAGAACCCACTTGACAAACCAGTATGTTATACATTGTTCTCCTAATCTATGTTAATGAAACTGTATATTTGCTTGGAAATCTGCCTTCAAGATTCATGTCAGTGGTTTTATAGCCTGAGATGACTCACCTGGTGCCAATGTTATCTCAAAATGCATGCTGTGGGTGAGGGGCCTGGTGCCATTCTCTGAGTCTGAGACATTTCCTTTCTCTAATTAGCAGACTGCTAGTAGCTATATAACATCCAGCTAAAGACTAGCGGGGGGGCACTCTTTCTGCCCCCTTCTGATGTCTATGTCAGAAGC EMBV3_02472 GGAGACAGAACGGGGGTCTGTTTTCAGCCTCAGTTGCCTGAGTGGCCTCTGGATCTGTCT Gene BVV0102_325235 + 1 EMBV3_42034 GK000010.2:87178084-87186241 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12595 TCTCATTGATGGTTTGCACTGCTGTCTGCTCTATTGGTGAAGCTGTTGGGGCAACTGTGG Gene BVT0102_311882 + 1 EMBV3_32999 GK000008.2:100399093-100408406 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39806 GATGAAGCATAAATCGGAAACAGATACAAAGGAATTGATCCATTTTCCTTAGATGCTCTT Variant GeneID:538090|CCT6B:NM_001034642:277_cdna 664^934 3 EMBV3_16632 GeneID:538090 19 GENE CCT6B MGC127900 MGC140065 chaperonin containing TCP1, subunit 6B (zeta 2) EMBV3_14182 TGGCAGGGCAAGGTTCGGGATCATGAGTTGGTGGAGAGAGACTTTGAACGAGAGTATGGA Variant GeneID:507115|BIN3:NM_001075299:61_cdna 90^138 2 EMBV3_33970 GeneID:507115 8 GENE BIN3 MGC140433 bridging integrator 3 EMBV3_25740 CACGTTCCCTCCAGTCAGATGTTTACGGTGCTTTCAGGGTCATTTCTAGGAGGCAGCTTT Gene BVT0102_006719 + 0 NULL GK000027.2:4969450-4996675 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11175 GAGAAGGGGTTTCATGCATTGCTACGTCTCCAACTCAATGTAGGTGCTCAGTATTTTTGG Gene BVV0102_231613 + 1 EMBV3_40608 GK000018.2:52564227-52582658 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086790 TCONS_00086793 TCONS_00086791 TCONS_00086792 TCONS_00086794 1 XLOC_052251 Coding TCONS_00086791 XLOC_052251 Coding Coding ZFP112 18:52580418-52618003 j TSS64529 5448 1 TCONS_00086791_6 903 0.191813509544787 6 0.855204342273308 3.02075095849004e-11 2.71022862256535e-11 3.42149671548247e-07 1.8971370337485e-11 1.33834024690524e-11 1.17926446318173e-11 1.83898866705051e-11 3.38230585069329e-05 2.58652108953274e-11 4.05116394192407e-09 8.383921157256e-06 4.93148637424676e-12 2.5178313963445e-07 1.29585735288943e-11 5.32609235409236e-06 0.000780358272138868 3.08059531668382e-11 3.92131526684002e-08 1.93503236318185e-11 2.18118661413969e-11 1.08844896177391e-11 0.000298438062963236 0.00032552195691778 0.00047873563706072 1.65451086187474e-11 2.17803655196918e-10 1.86062252430436e-11 1.25604404555325e-05 2.70341107924524e-05 1.56774067744878e-09 XM_002695086.3 ZFP112 PREDICTED: Bos taurus zinc finger protein 112 homolog (mouse) (ZFP112), transcript variant X1, mRNA. 0.0 5182 100.00 0.527165932452276 NM_001083335.1 ZFP112 Homo sapiens zinc finger protein 112 homolog (mouse) (ZFP112), 0.0 3301 83.86 0.556534508076358 TCONS_00086791_6 sp|Q9UJU3|ZN112_HUMAN ZN112_HUMAN Zinc finger protein 112; 0.0 1463 79.47 0.996677740863787 8 coding 1 1 1 1 -0.00780137576771123 0.943930797572485 0.00819975509174573 0.929155374171626 ATGGGGGAGATACCCTACACCTGTGATGTGTGTGGGAAGGGGTTCGGATTTGGGTTGCTCCTGTGTTTCCATCAGAGGGTCCACAGTGGGAAAAGGCCGTATAAGTGCACCAAGTGTGGGAAGGACTTTGATCAGAGCTCCAACCTTCTTGTCCACACAGGGGAGAAACCCTACAAATGCAGCGAGTACAGCAAATGCGTCAGTTCCAGCTCCATTCTCCAAGTTCACCAGAAGCTGCACATGGGGAAGAAGCCTTACGAGTGTGACGAGGGCGGTGGTTGTGTCCATGCTCCTGTCGGGAATTCTGGGAAGCGTAGTCCGGGAGGTCTCTGTAGGCAGAGTCACTTCCGGCTCAGGTACGCGAGGCCGCGGCCTTCGTTCTTCTCGGAAAGGTCTCTGCCTTTCCCCAGGAAAAGGACAAGAAGATGATGAAGTTCCAGGAGCCAGTGTCCTTCAAGGACGTGGCTGTGGTCTTCACCGAGGAGGAGCTGGGGCTGCTGGACTCGGCTCAGAGGAGGCTGTACCAGGAAGTGATGCTGGAGAACTTCCAGAACCTGCTCTCAGTGGGAAATCAGCCCTTCAAACCAGAGCTTATATTCCAGCTGGAGAGAGAAGAGCGTTTGATGATGGAGTCCCAGAGAGGAACCAAGAGTCCACATAATATGGAAAGTATTCAAGAAGTGGGATTAAGCTGCTTTTCCCCCAAAGACCTTTCCACCTGGCAGTCCTGGCAACGAGGTGCAGGCAGGTTAACTGGGTGTCAAGATTCCATGAGAAACTTCCAAGAGAATATTTCTCAGTTGCAAAAACAAGGTGATTCCCCCTGCCAGGTTTGGGCAGGAATACCAATTCAGATTTCTGAAGATGAGAACTGTGTCTTGACTCACATAGGAGACGGTTCCAATGACATAAAAAATCAAGAATTTCCCTCTTGGCGAGCCCACCATTCTTGGAGGAAAATGTACCTTACAGAGTCACGTAATTATCAATGTCGATGTCAGCAAGTTTCCAAGGAAAATGATTTCTGTAAATCTGACAGCATCAGTTGGATCTCACATCATGGTGATAATCTGGGTGTACACAGAACAGGAAAAAACTCCAGCTGCCATGACTGTGGAGAAGATGTCATGAAGGTTTCATTGCTTAATCATATTCAAACAGGGCAAAAGCCCTATCCTGGTAATGAGTTCAGAAAAGCCTTCAGCGATGACTCCAGCTCTGAAGTTCATCAGCAATTAGATTTAGAAGGAAAGCCCTGTACATACAGTGCATGTGAAAAGGACTGTAGTTACAGGTCAGTTCTTCATATTCATCAGAGTGTTTGTAGAGGAGATCATTGTATTTTTGAGAATTCACATCTGCAATCGCATCAGAAAGGACACGCAAAAGAGAAGCCATTTAAATGTGAATACAGTGAGAGCATCAATCAGTGCTCCTCTCATAACACATATCAACTTATACCCAGAGGAGAGACGTCTGATAGATACAGCGTGTATGAGAAAGGCTTCAGTCATAGCTTAGACCTTAGTAGTATTGTTAGGGTCTACATCGAGGAGGAATCCCATGAATCTGAGGAGAATGGGAATGCCTTTAATGAGAATTCTTGTCTTCAAGCCCATCAGAAAATCCACACTGAAGAGAAACGATACACAGACATGGAGTGTGAGAAAGGTTTCATTTGTAACTCAGATCTGAACATTCAGCACAGAGTTCACATGGAAGAGGTTCCCTATAATTCTGAGGCATGTGCTAATGGCTTCAGTCTGGCCTCACATTTTCAAAACCTTCAGATAGTCCACACTAGGGAACAACCCTATAAACGTTACACATGTGGTAACAGCTTCAGCCAAAGTTCGTATCTTCAAGCCCATCAGAAAATTCACATCGGAGAGAAACCTTACAAGGTGTGTGGGAATGGCTTCAACTGGAATTCAAAACTTAAAGATCATCAGAGAGTCCACACTGGCGAGAAGCCGTACAAATGCAGTGCATGTGGTAAAGGCTTCAGTCATAGATCTGTTCTTAATGTTCATCAGAGAGTCCACACAGGAGAGAAGCCTTATAAGTGTGAGGAGTGTGATAAGGGTTTCAGTCGGAGTTCATACCTTCAAGCCCATCAGAGAGTCCACACAGGAGAAAAACCATACAAATGTGAGGCATGTGGGAAGGGCTTCAGTCGTAATTCATACCTTCAAGGGCATCAGAGAGTCCACACTGGCGAGAAACCATACAAGTGCGAGGAGTGTGGGAAGGGCTTCAGTCGGAGTTCACACCTTCAAGGCCACCAAAGGGTTCACACGGGAGAAAAACCATTCAAGTGTGAGGAGTGTGGGAAGGGCTTCAGTTGGAGCTTTAATCTTCAAATTCATCAGAGGGTTCACACAGGAGAGAAACCCTATAAATGTGGAGAATGTGAGAAGGGCTTCAGCAAGGCCTCAACTCTTTTGGCCCATCAGAGAGTCCACACAGGAGAGAAACCCTACCAGTGTGATGAGTGTGGTAAGAGCTTCAGTCAGAGGTCTTACCTTCAGAGCCATCAGAGTGTCCACACTGGAGAGAGACCATACATCTGTGAGGTTTGTGGGAAGGGTTTCAGTCAGAGAGCATATCTTCAAGGCCACCAGAGAGTCCACACCAGAGTGAAGCCGTATAAATGTGAGATGTGTGGGAAGGGCTTTAGTCAGAGCTCACGCCTTGAAGCACATCAGAGGGTCCACACCGGAGGGAAACCCTACAAATGTGCAGTGTGCACGAAGGGTTTCAGTGAGAGTTCCCGCCTCCAAGCCCATCAGAGGGTCCACACAGAAGGGAGGCCCTATAAATGTGAACAGTGCGGCAAGGGCTTCAGTGGGTTTTCAAGTCTTCAAGCCCATCACAGAGTCCACACTGGGGAAAAACCATACAAATGTGAAGTGTGTGGAAAGGGCTTCAGTCAGAGATCAAACCTCCAGGCTCATCAGAGAGTCCACACAGGAGAGAAACCCTACAAATGTGACGCGTGCGGTAAGGGTTTCCGTTGGAGTTCAGGTCTTCTAATTCATCAAAGAGTCCACAGTGGTGATAAATTCTATACAAGTGAAGAGTATAGTAAGGGTTATCCTTCATCAGAGAATCCGTACAGAAGCGAAGTTCTGTAATGTGGTGTTCCATTTTGTTCTGAAGTCTTCAAACAAGAGCTGAAATTTTCCACTCACTTGAGTTCTCATAGTAGAAAAAGAATTTCTTTCATGAAAATGTAATGTTTCTGCTCAACATCAACATTTACAATAGTCCATACAGCAGAGACTTACCTAATGAGAAGCGTTCCATATGGGATTTCATGAGAACTTGAATATCAGTCACTGCAAGTGACTTTCATCAGCTCTTGTACTAGAGCTTAGAAAAGACATGAGTATGGCTAGCCACCTGCTGCTGCTGCTACGTCGCTTTAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTTCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCCGACTCTAGCGACCCCATGGACTGCAGCCCACCAGGCCCCTCTGCCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGTGTGCCATTGCCTTCTCCGAATTTATACAATGATGCGCATACCTAAATTTACGTCCACTGGAACGTAAGCTTATTAAGAGAAGGGGTTTCATGCATTGCTACGTCTCCAACTCAATGTAGGTGCTCAGTATTTTTGGTAAATGACTAAAAGTATGTAAAGTTGTCATGTTTGAAATGCTGATTTTCCCCAAAAAATAATTTAAAATATATTTGGAGGAGGGATCCTGCAAGTCTTAATGTAAGCAAATAAGTAAGCATAAACATTATTTGAAATGTAGAACATAGGCAGTATCGCAGTCTTAAATGACATGAATTTGGTTTAACCCCCCCAGGATTGGTCCTCCCCATTTGTCCCTCATCAGCAGGGATGGGCTGAATTTCTTAGCATTTGGTCTCTTTCTCTACAGTGTACTATCGGGTTAAGTTTAGCTCTGTGTGTGTGTGTATACCTATGTGCACTTTAAAAGGACAATACAAACTGATAAAACAGTGTTTCTGGTTAACTTGGCAAAAATGAAATGCTGCATTTTACATAACTGAATTTTTACTCCTGCCCTGTGTGTTAAGACAGTTTTACTATAATATTTGGAAAGTGTCAGAAATGGTTACTAACAGTAACAGTAACTTTCTTAATAAATGTTCAAATTACAATATTTGTTTTTCTAGCTTCCATATTTCCATTAAAATCCTTTTGATCTGACTGGTTTCTATATAGCCTTTGTCCAATTCAGACCTCTTTAGCAGGATCTGTGACAAGTTTGGAGGACTTTAATTTTGTCAAATTTTATATCACCATACTTTTCCCACTCATGCAAAGAAAGGAAAAAAAGTTGAACTATAGTTGATTTACAGTATTGTGTTAATTGCTACTGTACAGCAAAGCAAATCAATTAAAAATTTCTTTTAAAATATTCTTTTCCATTGTGGTTTATCATAGGATATTGAATATAGCTCTCTGTGCTATCCAGTAGGACCTTGCTGCTTATCCATTGTATATATAAAAGCTTATGTCTGCTAAGCCAGCCTCCTACTCCATCCCTCCCCCAACCCCTGGGCAACCACCGGTCTGTTCTCTGTGTCCGTGATTCTCTTTTTGTTTTGTAGATGTGTGCATTTGTGTCATATTTTAGATTCCACGTGTAAGTGATACCATATGGTATTCGTCTTTCTCTTTCTGACATTTCATTTAGTGTAAGAATCTCTGGTTGCATCCATGTTGTTGCAAATGGCATGATTTCATTCTTTTCTATGGCTGAGTAATATTCCACTATATATATGTGCTGCATCTTCTTTATCTATTCATCTGTCAATGGGCATTTAGGTTGCTTTCCATTTCTTGGTTGTTGTGAATACTGCTGCTCTGAACATAGGAGTGCATGTATCTCTTTGAATTATAGTTTGGTCCAGATGTATGACCAGGAGTGGGATTGGTGGATCATATGATAATTTTATTTTTAGTAAGGAAAGGAGAAATATTGAATTTTTCTAGGCATTTTTTCAAATGTATTGATTATTAGGATAAGATTTCCTTTTGCTTGCTAATCTGTATCTTCAAGAACAATGCATTTTATTGGAGGAAGTGAAAAATACAAATTTGTCAGAGTCGTACAATATGTATCAAGATGTAAAGTGTACATTTTTGTTGTTCAGTCGCTAAGTCATGTCCAACTCTCTGCGACCCCATAGACTGCAGCACGCCAGGCTCCTCTTTCCTCCGCTATCTTCCAGAGTTTGTTCAAATTCATGTCCATTGAGTTGGTGATGCTATCTATCTCATCCTCTGCTGTCC EMBV3_24330 CCACATGAACGCCACGGCCCAGGGCCACAGCCTGACCAAAGCTGGACTCTTTGACACAAC Variant GeneID:100271850|LOC100271850:NM_001145792:9_cdna 360^434 2 EMBV3_12021 GeneID:100271850 7 GENE LOC100271850 NULL hypothetical protein LOC100271850 EMBV3_39840 GATCATCACCCTTTGGGAAAAGCACGCTGTCTTCCTCCTCACCAGTAGCACATGATATGG Gene GeneID:512403|LRRC36:XM_002694819:691_cdna Constitutive 1 NULL GeneID:512403 18 GENE LRRC36 NULL leucine rich repeat containing 36 EMBV3_23304 GGCCTAGCAATCATTTCCATGTCTTTCAGAGCCTGAAGTTTACTGGCCTGTAAGTAGTTG Gene BVV0101_076190 + 1 EMBV3_22178 GK000026.2:24896346-24945607 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09341 CGGCCTGTTACTGCCCTGATGGGAATTCTGCTTTTCCCGTTCCTACCCAGTGCTTCTGAA Gene GeneID:509513|LOC509513:NM_001080904:604_cdna Constitutive 1 NULL GeneID:509513 4 GENE LOC509513 NULL hypothetical LOC509513 EMBV3_19079 ATGGTCGCCATGTCCCCAAGACTCTGTGCTATGTTAGTGGTTGGATCTTTTGCCTGGGGA Gene GeneID:513384|LOC513384:XM_002698773:2_cdna Constitutive 0 NULL GeneID:513384 28 GENE LOC513384 NULL similar to Olfactory receptor 5D18 (Olfactory receptor OR11-143) EMBV3_11161 AGGGTAATCCAGTGCAGGGTTTCTTGGGAGTGTATCTCACTGGTCAAATTCTGTGAAGCC Gene GeneID:505060|CYP51A1:NM_001025319:10_cdna UTR3_Alt 2 NULL GeneID:505060 4 GENE CYP51A1 CYP51 cytochrome P450, family 51, subfamily A, polypeptide 1 EMBV3_09516 AAAGAGAGACTAGAGGGGTGATTCTCTATGCCATCCACAGACCAATGCCAGTCTGCACAC Gene GeneID:531018|PAQR8:NM_001101135:305_cdna Constitutive 0 NULL GeneID:531018 23 GENE PAQR8 NULL progestin and adipoQ receptor family member VIII EMBV3_42268 TGTCCCGCCGGGCTGCGGATTACGGCGACTGACCCCCCACCCAACCTGCCCTACTTCGTG Variant GeneID:508359|MRPL49:NM_001014871:548_cdna 88^238 1 EMBV3_14789 GeneID:508359 29 GENE MRPL49 MGC142600 mitochondrial ribosomal protein L49 EMBV3_41635 CAGTCGTGTTTAACTTTCGAGGCTTTCCTTGCCAGAGCCGTGTTCGGTATCTGAGTTGTC Gene BVV0101_010442 + 0 NULL GK000029.2:24535171-24565022 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164699 TCONS_00164700 TCONS_00164701 TCONS_00164703 TCONS_00164702 1 XLOC_100285 Coding TCONS_00164703 XLOC_100285 Coding Coding SLC6A5 29:24560782-24661705 j TSS123160 6329 1 TCONS_00164703_2 563 16 0.937446741047542 0.0001294882625652 0.00134701685042254 0.000967713714290653 3.6800194516617e-06 1.04045895187157e-06 2.61761242818396e-05 0.000810039785355221 0.000483442892310775 0.00090940966101966 0.000316447548166114 2.82850220655159e-05 0.000142350439400167 0.000202707056734714 0.000582687151629464 0.000856588011269188 2.62674314042711e-08 0.000141647210007548 2.24699506467044e-08 0.00094362545345306 0.000105975876706823 0.000286374250259547 6.96778864818946e-09 3.73426768529324e-05 1.62724834575923e-08 0.00149948862342733 0.000161302861801955 0.000852208754454999 4.34488961188926e-05 9.21935941846382e-05 5.95449750908861e-09 XM_002699103.3 SLC6A5 PREDICTED: Bos taurus solute carrier family 6 (neurotransmitter transporter), member 5 (SLC6A5), mRNA. 0.0 5788 99.97 0.50734713224838 XM_005253225.1 SLC6A5 PREDICTED: Homo sapiens solute carrier family 6 (neurotransmitter transporter), member 5 (SLC6A5), transcript variant X1, mRNA. 0.0 2690 91.46 0.299731395165113 TCONS_00164703_2 sp|Q9Y345|SC6A5_HUMAN SC6A5_HUMAN Sodium- and chloride-dependent glycine transporter 2; 0.0 1150 99.29 0.998223801065719 1 coding 0 0 1 1 -0.0734965886309143 0.579614242040764 -0.00864925912483799 0.848754541335809 GTCACGGTGAGCTGTCACCCAGAGTCACAGTGAGCTGTCAGCCAGAGTCACAATGCTACGGATGGGCTGAGGGCAGAGGCTGCCGGGAGAGAGAAGAGCCTGACTGGGCACAGAGCCAGGTCAAAAGGCAAATCTACTGTCTCCAGTCCCTGCAACAAGGAGTGCCCAGAAAGCAGCAGTAAACCTAAGGGAACGGAGAACATTCTGTATATTCTTCCAGGACTCCATGGAGAATCCTGAAGACCCCTTGAAGGCGAGCCTTAGCCCTGGTCTAGGGGTGGGCATGTAACCTCGTTCTGGCTAATTCTCAATGTTTATTAGAGGAAGTCACTGTGGAACACATGGAAAGATTTTCCTTTCCTGCTAAGAGGAAGGTGCTTTCCTCATCCCTTACCTAATGATGCTGGCTCTGGCAGGGTTGCCCATCTTCTTCCTAGAGGTGTCCCTGGGCCAGTTTGCCAGCCAGGGGCCGGTGTCTGTGTGGAAGGCCATCCCAGCCCTGCAAGGCTGTGGCATCGCAATGCTGATCATCTCCGTCCTAATAGCCATATACTACAATGTGATTATTTGCTACACTCTTTTCTACCTGTTTGCCTCCTTTGTGTCTGTGCTGCCCTGGGGCTCCTGCAACAACCCTTGGAACACGCCGGAATGCAAAGACAAAACCAAACTTTTATTAGATTCCTGTGTGATCAACGACCATCCCAAAATACAGATCAAGAACTCGACTTTCTGCATGACCGCCTATCCCAACTTGACAATGGTTAACTTCACCAGCCAGGCCAATAAGACGTTCGTCAGTGGGAGTGAAGAGTATTTCAAGTACTTTGTGCTGAAGATTTCTGCAGGGATTGAGTATCCTGGTGAGATCAGGTGGCCACTAGCCTTCTGCCTCTTCCTGGCTTGGGTGATTGTGTATGCTTCCTTGGCAAAAGGAATCAAGACTTCAGGAAAAGTGGTGTACTTCACGGCCACCTTTCCGTACGTCGTGCTCGTGATCCTTCTCATCCGAGGCGTCACCCTGCCTGGAGCCGGCGCTGGGATTTGGTACTTCATCACGCCAAAGTGGGAGAAACTCACAGACGCCACGGTGTGGAAAGACGCTGCCACTCAGATTTTCTTCTCTTTATCTGCTGCGTGGGGAGGCCTGATCACTCTCTCTTCTTACAACAAATTTCACAACAACTGCTACAGGGACACGCTAATTGTCACCTGCACCAACAGCGCCACGAGCATCTTCGCCGGCTTCGTCATCTTCTCAGTCATCGGCTTCATGGCCAACGAACGCAAGGTGAACATCGAGAATGTGGCCGACCAAGGGCCAGGTATTGCATTTGTGGTTTACCCAGAGGCCTTAACCAGGCTGCCCCTGTCTCCCTTCTGGGCCATCATCTTCTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAGACCATTGTGACCTCCATCTCGGACGAGTTCCCCAAGTACCTGCGCACTCACAAACCGGTCTTTACTCTGGGCTGCTGTGTTTGTTTCTTCATCATGGGCTTCCCAATGATCACTCAGGGTGGAATTTACATGTTTCAGCTTGTGGACACATACGCCGCCTCCTATGCCCTCGTCATCATCGCCATCTTTGAGCTCGTAGGGATCTCCTATGTGTACGGCTTGCAAAGGTTCTGTGAAGACATCGAGATGATGATTGGATTCCAGCCAAACATTTTCTGGAAAGTCTGCTGGGCCTTTGTGACTCCGACCATTTTAACTTTTATCCTTTGCTTCAGCTTCTACCAGTGGGAGCCCATGACCTATGGCTCTTACCGCTACCCTAACTGGTCCATGGTGCTCGGATGGCTCATGCTTGCCTGCTCCGTTATCTGGATCCCGATTATGTTTGTGATAAAAATGCATCTGGCTCCTGGCAGATTTATTGAGAGGCTGAAGTTGGTGTGCTCGCCGCAGCCGGACTGGGGTCCCTTCTTAGCTCAGCACCGTGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGGACCTCTTCGCTGGGACTCAAACTGCCAGTGAAGGATCTGGAACTAGGCACCCAGTGCTAGTCTGATGGCATGGGATGGCCCAGACTTGATTCTCTTTCTCCTCTCTGCCTTTCCCGGATGCTTTCCCCAGCTGTTTTCCCATTTTTCGTCTTCCTTCTCCCCACGTCTCGGTTCATACCCGTGCATGAGAGCGATGACTTAGAAAAGTAGGACATAGTGTTGCATGCTGCAGCCAAGAGCTGGACGGAGCTTGGTTTGCCCGTGTCCACGCTGTCAGCTTCCAGTGGGGTTTACCTCACAGGCTCGAATCCACGAGGGGAGCGCCTCCCAGTGAAGTCACACGTAGGTGTTTGTGAGTTGGTCAGTAGAGAAGCATCCCCTGTGATTGTCACCAGTGGGGCCAGTCAGGCTGATGCAGGATAACCAGACGGTTGGTTTGCACTCATCTGAGCCATGTCGTGGTTTCGTTCAGACCCACAAAGTTCAGGACAGGGTGTCTTTGGAGGGTTGGCAGTGGTCAGAAAATGTTTGCAAGTAAGAAGAGCTGGTGGATTCAGACACCGCCAAGGTGATGAAGTTCCCATTTCCATTGACTGGGGCTCTGTTTCCATCATTTGGACCAACTATCTCACGTACGCCAAGGACTCACATGCTTTCTTTCTGCAAGCTGAGAACCTCAATGAAGAGTCGGCTCTATTCCCTCAGGTGGTTTTTTTTTTAATGACCATGGTTGTGAATTCTTTGGGTCCTTTCCTCTACCTCTGCTTCATATTATTTGTGCCCGATATCATACGTTCATACCAGAGTGCCCTTCTGGTTTCTCCATAAGTCGAGCACCATGGTCCAGTGGCACCGTCCCGTATGTCTTCTCTTCCAGACGTCTTTCTACGAGCTGTAGTTACTTTGTCTCTCAGCCTCTGGGAAACTGAGACTTGCCCTGGTTCTGTCTATGTGTTATATATATCAGACACAAACTCTCGAAAGACAGATAATATCTCAGTTTTTACTCTTCACTTTTTCATGCACAGTCAATGCCAATTGTAGCCATTGAATCAAAGAAGTAGAGAGTTGAAGAGAAAGCAACCATAATACTCACTGCACTTTTTAGGTCACTGCAGGTACAGAAGTTTCTGATACATGCAGGTTAGGTAAGTAGCAAGTGAGCCAATTAGAGCTATTGATTTTAAGACTACACTTAGCTGATACCATTTGAAGAGTTCCCAATTCACAGTACTCATAATCACACTCTAATGAGAGCGGATCATATGTCTACAGAGATTGGTGAAGCTGTAGCCTCTATTATCTTCTTGTATCCTGAACATGCATATATGAGATTTTTAAAATGTGGTAAGTGTTCATATAGTGTGTACTTGTAATGGTGTTTTCTGTCCTTATAAATATCTTATGAATCACTGTAGAGATGGTGAGTATAGTGCAGTATAGTCTTTTTTTCCCCCCCTTCTAGTAATAATATCTAAACTTTAAATTGTTTCCTTAGGGGAGACCATTGCAATCATTTTCTTGTTTGTTTGTCTTCATATTACAGGGTCTCAGGCAAAGTTTTCAGTTCAAATCTTGTATATTGATGTGACATTTTCATCTTTTCAACAGTAACAAAACCCAACAACAGACCTTAAAGTAATACTTTTTAAAAAATAATTTCATTTGTTAAAGAAAAAAAAAACTCAGCTCATCTTACTGAGCTCTTTCTTTTCTGGGGCAGATATCATTGTCATTTGCCATGTGAACTTCAGGTTTTGAAGAGTAGTCTGTGGAAACTTTCAAAAAAGGAAATGCAGATGGGTTTCGAACTCTAGGTTTTTCATCGCTTCTGTTTTCAAGGCGTGTTTGTTCTTCCTCCTCCTGTTCCCTTTTTCTGCTTACTTACCTCCCAAAGCTAGAACTTACTGGAATCCATCACAGAGACTAAACCCTAAGCTTCGCTTAGACTTAGCTTTAGGAAACTGAGCCGTGACCTTCCTGTCCCAGTGTTTCCATAGCGACCTGTCCAGCGTTAACATTGGTTTCCTTGAGAAAGCCATATTGAAAAGAAGTCCCGAGGGCTCTAGCAGATCCTGCATGGTGGTACCGAAAATTAGCCTCTCCCCTTGGTATCCGACGGGGTGGGAGAGGAAGGGAGGACTAGCTTTGGTTTGGAAAGGATCTGCAGCCTTTCCAATTTGAACATTGAAGAAAATCACTGAAATCAATTAGCATCCTCCCATGGGAACGATGGGTTTGCAAAAGGATGCATGGTTTCTGACTTTCCTCTCTTGCCTCTTGGCTAAAGTTTGAGTCGGATGCTGGATGCCAACCCAATTTCTGTTAATTATTGCTGTTGTGATTGAAGAGGGGGTGAGGTAAACTCATGGATGCTGCCAGATTTGTTTTGTACACACCGCAAGTTCGATTCATTGTGACAATGCGGACAGCCTCATTAACTAGTGCGTTTTGCACTTGGGGCAGGGCAAATTCATTACAATTTGTCCAGTTAAGACCCAGGGGCTGTTCCCTGAGTAATTGGGTTTTTGTGTGCGTGTCTATCTGTGTTTTTAACTGTTTTCCTACCGTGTCCAAGTTTCATGTACAGTGTCCTTAAAGGTGGAAGGTTCTAAGCTTACCTGGGAATGGTTACCTTGTGAGTTTAGTTTTGTCTCTTTCTACAGTCGTGTTTAACTTTCGAGGCTTTCCTTGCCAGAGCCGTGTTCGGTATCTGAGTTGTCTCCGCTCATGGCCAGTCTGCTCCTGCGGTACCTCCCCTGGATTGGCTGGGACGCTGAAATGCATATGACCAGGTGGATGTTTCCATGCTATTGAAATGCACCATCAAGCGGATGGAAGAAAATGAATGAATACAAATGAAATGAACAGCATTGTCATAAAGCGCCACTTGAGAGTTCCCCTTCAAATGGAGGCAAAAACTGAGTTGCTGAGGAAAGGCTTGTTTTGGCTCACTGTGCAGAATGGTGGGGTGTTTTCTACTTGTGAAATTGTTTCCTAATACCAACAAATGCCAGAAACCCATTCCGAGAAAAAAAAAAAGCCATATGTTAAAAACAGTAACCCTGTAATATCCTTAAAGGAGAAAAATATGTGTATGTCTTAACAATTGGTGTTGTGACTTCTTATGCATTTATTTGTCTTGTGTATTAGTAACTTTTAATCTCCTTAAGGCTGTGTGTTTGTCATGTACAAATGTGTCCAGTCTGGTCTCTCTTCTCTTTCTCTCTCATATTTATTTATTGCATGAAATCTGTGGTCAATGCAAAATCTCGATGACCTCAACGTCTTTGAAATTTCCACTGTGTCTTTAATAGGTCAGAAATGGAGTCAACTTGTATTTCAGTGAGCGGCACTTTAAAAGGACATTGACCACAATGACCTGGAAATGGATAAGACTTGGGTTGTCTTTGCTAAGGTTGCACTGGAGTTGAGTTTTCCTTTAAGTTCTAATTCTGTTATCTCTATGTGCCTCGTGCTTCTGATACACTTGACCTGTCAGCATGGTTTTCCCATGCCTAAAACTAAGATTTTTTTCTTTTCTCTTTGTTCCCTTGGCCATTGGTCATCATTCTTTTCACCAGAGACTTGCACAATAACTATTGCTTCATGTAAGTGTGATGGCAAGATCCTGCTGCTGCTACCTGGATTTGGGTCTGTGACACACTTCTGCAGGCTGGGTGGTAGGTCCTCTTGCAGAGAAAACAGGCCAAGGTCAGCGAATGAGTGTCACCTCTGTTTCCTCTTGGGTATTGTGTAGGAAACCTCCAGGCTGGGAGCACAGGTTTGGATGATCGAATCTTAATGGTGATTTCTCTGCAAAGTGGTCTGAGGATTTGCAAAAGTAAAGCTATCGTTCCTGGATTTTGCTTCAACTGTACAGAAAGGCCAAGTGATTTTGAATTGTGGTCTCTGCTTTGGTCACCTCTGAGCAGCCTGCAGCCAAAGAGAAAGTGTTCTCAGATTGGGTATTCATCACCCTCAAGAGGGAGCAGTGGCTTGATTTGCCTGCCATGGCTTAAATACATCTTCAGGTAACCATTTGCCTTACAGGTGTATTTTATTGTTAGGATGATAGTTAGTAACTGACTAGGAACTGTTTTGTGTCTCATTTTTTGGGTCTTTTTTTTGCACTTTATATGGGCCTATCATGGGGTAGGTTTATTCTTTAACTGCGTACTTGGCTATTATCCTTAATGCAGGCATCTTATGTTGTCCTGTCGCCTATGAATAAAGATATGTTCCCTAATCAGGTCCTTATATTTTTTCATTAACTGTACATGAAGAAAATATATTACAT EMBV3_20139 ATGGGCGGCGGAAAATTGCCTTTGCCATCACTGCAATTAAGGGTGTGGGGCGAAGATATG Gene GeneID:326602|RPS18:NM_001033614:65_cdna Constitutive 0 NULL GeneID:326602 23 GENE RPS18 MGC127496 ribosomal protein S18 EMBV3_25676 TATATGGTCCTGGAACCAACAGAACTACTGGATCTCAGAGAAAACAAAATGCCAAGAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14570 GTTGTGGAATATTGCAGTGGCATCAAGACACCAAGAAGAAGCCCCTCCTTACTGACCAGG Gene BVV0102_180136 + 0 NULL GK000029.2:2493303-3811589 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33716 TGAAGGAGGTTCAGGATCTCATCCCTTTGCGCTCAGGGTCCCCGGATACTTTCGTACAAT Gene GeneID:527641|SYTL1:XM_002685692:353_cdna Constitutive 1 NULL GeneID:527641 2 GENE SYTL1 NULL synaptotagmin-like 1 EMBV3_21118 TCCTGGTGGAAAACTTCTACAAATACGTCTCCAAGAGTTTCCCTACCTGTTCAGTCCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23276 ACCCATACTGGGGAGAAGCCATATGAATGCCATGACTGTGGAAAATCCTTCAGCCAGAGC Gene GeneID:100140756|ZNF10:XM_002694429:138_cdna Constitutive 0 NULL GeneID:100140756 17 GENE ZNF10 NULL zinc finger protein 10 EMBV3_16644 CACATTTGGCCCTGTGGTGTTGGGACTTCAGGGACCTGTCTGGGCTAGGGGTTAAACGTT Gene BVT0102_152669 + 1 EMBV3_25877 GK000018.2:55579280-55584938 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084179 1 XLOC_051482 Coding TCONS_00084179 XLOC_051482 Coding Coding GRWD1 18:55573213-55584859 = TSS63118 7606 1 TCONS_00084179_2 446 0.325138048908756 7 0.347445255474453 0.000356935602032657 0.000371894146608584 0.00039226454226197 0.000376221567610438 0.000255719410029844 8.84324144557004e-06 0.000272069044101635 0.000185873445322586 0.00110997117550744 9.26392344631218e-05 1.6614851470453e-05 1.13968542906216e-05 1.8260524651129e-05 0.000383583069396252 2.75263293958972e-05 9.81091562059099e-05 4.50615481117419e-05 0.000347936713361481 0.000528447279867532 0.00116532123477209 6.11351300868749e-05 8.87526201341291e-05 0.00010644744966611 6.51357570745098e-05 0.00176688501101074 0.000573381960572418 0.000350949061847985 5.78716997614234e-05 0.000222095071581941 0.000450647853882591 NM_001076239.1 GRWD1 Bos taurus glutamate-rich WD repeat containing 1 (GRWD1), mRNA. 0.0 3654 100.00 0.266237181172758 NM_031485.3 GRWD1 Homo sapiens glutamate-rich WD repeat containing 1 (GRWD1), mRNA. 0.0 1911 87.14 0.206941887983171 TCONS_00084179_2 sp|Q1JQD2|GRWD1_BOVIN GRWD1_BOVIN Glutamate-rich WD repeat-containing protein 1; 0.0 919 100.00 0.997757847533632 2 coding 0 0 0 0 -0.0698483098682422 0.643125560947263 0.00424582552395394 0.935311414508017 GAAGATGGCGGCGCTCAAGGGTCGTCGGCGCACGTGTGAACCTGGGGAGTCTATGGAGACCGAATCCCAAGAAACAGGGTCCAAGGGCCAGGCTCAGGTCTATCTACCTGGCCGGGGACCGCCGCTGCGCGAAGGAGAGGAGCTGGTCATGGACGAGGAGGCCTACGTGCTGTACCACCGAGCACAGACTGGCGCCCCCTGTCTCAGCTTCGACATAGTCCGGGATCACCTGGGAGACAACCGGACTGAGCTTCCTCTTACTCTTTACCTGTGTGCTGGGACGCAGGCCGAGAGCTCCCAAAGCAACAGATTGATGATGCTTCGGATGCACAATCTGCATGGGACAAAGCCCCCACCACCCGAGGGCAGCGACGACGAGGAGGAGGAGGATGACGAAGAGGATGAAGAAGAGCGGAAGCCTCAGCTGGAGCTGGCTATGGTGCCCCACTATGGAGGCATCAACAGAGTTCGGGTGTCGTGGCTGGGTGAGGAGCCGGTGGCTGGGGTGTGGTCAGAGAAGGGCCAGGTGGAAGTGTTTGCGCTGCGGCGACTCCTGCAAGTGGTGGATGACCCCCAAGCCCTGGCCACCTTCCTCCGGGATGAGCAGACCCGTATGAAGCCCATCTTCGCCTTCTCTGGCCACATGGGCGAGGGCTTTGCCCTCGACTGGTCCCCTCGCGTGCCCGGGCGCCTGCTGACCGGTGACTGTCAGAAGAACATCCACCTCTGGACACCAACGGACGGGGGCTCCTGGCACGTGGACCAGCGGCCATTCGTGGGCCACACACGCTCCGTGGAGGACCTGCAGTGGTCCCCAACCGAGGACACAGTGTTTGCCTCCTGCTCAGCTGACGCCTCCATCCGCATCTGGGACATCCGGGCAGCCCCCAGCAAGGCCTGCATGCTCACCACCGCCACTGCCCACGACGGGGACGTCAACGTCATCAACTGGAGCCACCGGGAGCCCTTCCTGCTCAGCGGCGGGGACGATGGAGCCCTCAAGGTCTGGGACCTGCGGCAGTTCAAGTCTGGCTCCCCAGTGGCCACCTTCAAGCAGCACGTGGCCCCCGTGACCTCCGTCGAGTGGCACCCCCAGGACAGTGGGGTCTTTGCAGCCTCGGGTGCAGACAACCAGATTACACAGTGGGACCTGGCCGTGGAGCGGGACCCCGAGGCCGGTGACGCAGAGACGGACCCGGGGCTGGCAGACCTCCCCCAGCAGCTGCTGTTCGTGCACCAGGGCGAAACAGACCTGAAGGAGCTGCACTGGCACCCGCAGTGCCCCGGGGTGCTGGTCAGCACCGCCCTGTCGGGCTTCACTGTCTTCCGCACCATCAGCGTCTGAGCTTGGTCTGGCCGAGTCTGTCTGGTCCTCCACTTACTTGGAACTGAAGTTGAAGTTCATCGTTTCCCTGGAAGGGACTCATTCAGATCTGCTGGCCAGCGCCTCTCCAAAAGGACTTGGTTTGGCCTTTGGCCACCATGATGGATTCTGTTTGACTTACTGTTCTTTGCAAGGACTTGGTTTGGTCCAGTGCCCCTCTTGCTAAGAGAGGCGGTTTGACTCATGGCTCTAAAAATAAGACTCGGTTTGCTCCCCTTGATTCCTCCAGCCGAAGCACTTGGGTTGACCCATGGCCCTGTAAAACCACTGCAGTTGCCTCCAGTGAACCCTCCGACCCAAAGACTTGGGTCAACCCAGTGAGCCCCACCTGTCAGAAGAGTCCATGAGCCCATTTCCCAGATGGGCCTGGTGTGGCCTGTGTTGCTGTGGGTATTTTGTCAGCTGCAGGCCCTAGGCTTGACTCTTTGATCTCTCTGCCACTGGTCTCCCTCAGGGAACTCAAGTGCCTTAGAGTGGCTGGACCAAATTTGAGGTGTGGGTTCCTCCAGCAGAATTTGGTGTGGCCCTTGTCTTTCTGCCAGCTGGGTTTGACTGGGTGGAGCCTTCTCCCCTCCCAGAGACAGGCATTGTGCAGGGGGGAATTCAGGAGCTCTTGAGGGGCAATAAAGAACCAGAATAGAGCCCGAATTGTGGAGGCTGGTCCTTCTGGCAGCAGTCTCATAAGGAAACGAGGAGGAGGGAGGGTTTGGCACCTGGCTGTCCTTGGACTGCTGGGTCCAGCCCTCAGCCCATTGGCGCTCTCTGGTTCTGCCTCTCCTAAATTTTATTCCATCTGGAATGCACCCCAGGTCTCTTGGTGGGGAAGAGTCATCTCATGTGTACCCCCGCATGCTGAGACTTCATCTCAGGGGGAACCAGGGAGCCCCTGTCTCTCATCCTTCCGCCCCTGCCCTCGTCATCACTTTCTCCCCATTTCTTTGTTCCCTCGACTGTGTCCCCATCTTTCCGCATCTCCTGGCCCCCAGGCTCTGTCTCCGCGCCCCCTCCCCCCGTGTCTCTCCTCCGCCACCGCTGTCTCCTCTCCAGCCTGCTTGGGCCGCAGCCCAGCCGTCCTGCCTGGCCATCCTCCCTGGCTCCCCCTCTGCGGCTCTGAGCTGGCCCCACCCCCTGCCCCCCCTCTCGGGCTAGGACTCCTCTGATCCGCCCGTGAGCACAGAGGTCGGGGGCCCGGGACGGGCCGCAGCACCCACAGAGGCCTTTCCTTGGCCCGAGCAGAGGAGCCCCCAGCAGAGGGCATGGGGGTGGGCTGCCCCACCAGGTATGTGCCTCCACGCAGACACCCTGGGCAGGGGTCCTGGCTTTGAGAGCTGGCCCCCGCTTCCCCGCACCATCTTCCTCGCTCAGACGTCTGCCCCAGCGCCCCCACCCTATCCTCCTGGGTCCTCATCCCCCAGATCTGGTGCCCCCAGCTCAGCCCATCTCCATTTTCGGCCTTATTTTCACTGCCTGCCCCCCACCCTCATCCTGCGTCTCTTCTTGTCCCATCTTCATCTCCCATCTGGTCCGTCTCTCCTTTTCCTAAGATGGGATCTCTGCTTGTCTTTGCCCGGTTGCTCCTAGTTCCGCCTGCCTCTTTTCTGTCTCCCATTCTGTCCTCTTGGGTGCCTGTGGCGGTGGGGAGGTCCTCTGTCCTTTCCTCAGGACAGCCTCTCCCTGCGCATCTCTTACCCTCTGTACTCTGGTCTGTCTGCAGTCTCCACGCTACACCCCCTCCTGGCAGTTTCTGCCCTCCAACCTGCTGTTGCTCAGGCCCCACTGGGGAGTGGGGGGAGGGTCGTGGGGGGAACAGCCAGGGTCTCACGGAGCATGTGAAAATGCTTCTATGGCGGGGGGCAGGGGGGCAGCCCCTGGGCGGGGCTTCTCAGCCTCAGATTAGACAGTGACTTTGAAACGAAGTTGACGCACCTTAAGCCCCATGTCGCCTTTATATGGAAACATTAAGCTGCTCTCCCAGGTCAGGAAGAGGCGGGGGGAGGGCTTGAGGCTCTGGATCCGCTTCCCTCGGATCCTGCTGTCGGTGATGGGAGGTGCGTGGGCCCCGAGGCAGAACCCCATCCCAGCTCTCAGGGCCATGCTGGATGCTGACGGGACCCCGCAGAGGTGAAAGGCGTCCCCACCCCCACCCCCAGCCTGCCTCTTGAAATGGACAAGATCACGTCTGTCTCTCAGGGCTGAGGGTAACAACGGGAGGATTTAGGAAAACGAGATCCTGGGTTGGAAAGGCTCAGGACTCAAACCGGCAGCCCACCCCCAGCACTTCATGACTCTGGCCGGATCTCTGAGTCCGCTCCCCAACCTGTGAAGCGGGGTGATGATCTTGACTTCCCAGCATCCTGAGCAGCCAAGGTGAGCCCAGAGGGTGGGCTGCAGAATTCTGGGAGCTTGGCAAGGCTGGGGACCAAGGTGCTCAGGAAACAAGGGCGAGTGATGAGGTGGTCTGTGGTCCAGTCTGGCGCTCAGGCTTGGGCACCAGGAAGGCTGGATGGGAGTCCAGGGTCTGCCGTTTCTTGACTGAGAGCTGGGACAGGAGACGAACCTCAGTGCCTCCGTTTGCTTTCCCATCAGAAGCAGAATCCCAACACCCATCGGTGTGGGTGTGAGGAGGCCCCCACCCATCACCCCCCTCCTGCATCATGTCATCAGGTGGCCTCTGAAAGGGGACTAGTGGGTAGTGAGGACTCTGAGCAAGAGGGGGCTGCAAATGGTAACATTTGCCTGTATTCTAACCTCAGACCTGCCCCCTTCGACAGACTCAGTTGCCGCTGCTTGGAAGAACAGTCTCTAATGCCCAGAAAGTTGAGGGTGTGAAAAGAGTTGGGGCACATCGTGGGCTGTGCACACAACCAGGTCTGCTGACTGGAGCCTCAGCTTTGCCTGTGTAGAGTGGGCCTAAGAAATGCCCATGTTGGGGGTGGAGACTGGGTGGTCACAGACAGCAGTGCAGAGCAGCGGGGCAGGGGAGTAGGTACATGTCAGTGTTGAACTTGACAGCAACTAACAACTCATTCTTCATGGAGAAAGTGCCCCCAGCAACCAGGCAAAGACAAGTAGAGATCCTTGTCGGGAGGCCCATAAGCACCCTAGAGCCTGGCACAGGGAGTTCATTGTACCTAGGTGCTTGGTAGGTGTTGATGGAACTGGGATGCAAAACGTTTAACCCCTAGCCCAGACAGGTCCCTGAAGTCCCAACACCACAGGGCCAAATGTGCAGCTGCTGGAGGGCAATGCGGTCTACAGGTCCAGGCGGGCCCCTTCCCTCCTCTGCGTCCCCCTGGTTCAGCTAAGATTCCCTCACATTTCTCAGATAAGGGAACTGAAGCTCAGGAAGAAATGTGACTTGCCACCATTCATATAGCTTGTAAGTGCCTGAGCTGGGATTCAGCCTAGAACTGCCTGATTCAAAAGCCCAAGTTCTTTCTTCTGGATTCCTTTTTAAGGATTTTTTTTTTTTTTTAATCCCCATTCCACAGATGAGCAACCTCAGGCTCCCAAAATTGAAGCAGGTGGTCCCAGGGCACATACTGGGTCAGCAACTGAGCCAGGATGGGAACCTGGGTCTATATAACTTGATCCTGACCTTGATAAAATCCAACATCCCCATTTTACAGCTGAGGAAACAGATTAGAAAGGTTTCCCCATGATCTGAAAGTCAGGGCTGAGCCTGGGTTTTATTGTGCTTGTTTTTCATAACAGTTTCATTGAAGTGTAATCCACATACCATACAATTCACACATTAAAGTGTACGATTGGGTGGTTTTTAGTATATTCAGAGTTGTGCGACCATGTTATTCAGTTGCCAAGTCGTGTCCAACTCTTTGAGACCCCATGGACTGCAGCGTGCTGCGTGGTGTGTACCCATCATTGCTATCTATTTTAGAACATTGTCATCACCCCAATAAGAAATCCCATTCCTCTGGCTATTGCTTCCCAATTGCCCCATCTCTCCAGTCCCGTACACCACTAGTCTAATTTCTCAGCTTAACAGATTTGCCCGTGCTGGGTATTTCATTTAAGTGGAAATAGGGGTCGCTGAGAGTCAGACACAACTGAGCGACTTCACTTTCATTTATCACTTTCATGCGTTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGTGGAGCCTGGTGGGCTGCTGTCTATGGGGTCTCACAGAGTCGGACACGACTGAAGCGACTTAGCAATAGTAGCATACAATATATGGTCTTTAGTGACTAGCTTCTTTCACTTCACATGGTGTTTTCAGGGTTCATCCACATTGTAACATCTATCACTTTTTTGTCTTTTAGTTACTGGGTAGTAGTCTATTGTGTGGACAGACCACATTTTATTCATTCATTCATCAATTGATGGATATTTGGGCTGCTTCCATCTTTTGGCTGTTGTGAATAATGTGGCTGTGAATATCTGTGTACAGTGTGTGGACACTTGTTTTTAATGCCCTTGGGTAGATACTTGTGTGTGGAATTGTAACTCTCCATTTAAGGAACTGCCAGACCATTTTCCACACCAGCTGTGCAATTTTACATTCCACCAGTAACAATAGGAAGGTGCCAGTTTCTCCACATCCTTGGTAACACTTTTCTGTTTTGTTTTTTCTTGTTCTTATAGCCATCCTAAGTGAGTATGAAGTGGTAACTCATTTTGGTTTTGATTTGCATTTCCCGGATGGCATAATGATGTCAATTATCTTTTCCTATGTTTATTGACTATTTGTACAGTTGACCCTTGAACAACATGGGGGTTGGGGGTGCCAACTCTCTCCACAGTCAAAATTCCAAGTATAACGTTATTATTTATTTCTTTTATTTGCTGCATCGGGTCTCAGTTGTGTCATCCAAGATCTCTCCTCGTGGCGCAAGGCCTCCCTAGTTGTGGTGCTTATGCTTGTTGCTCTGCATCATGGGAGATCTTAGTTCCCTGACCAGGGATGGAAGCGGGTCACCTGCACTGCAATGCAGATTTTCAACTGGACCACCAGGAAAATCCCTGAGTATAAACTAGAGTTGATCCTCTATATCCATGGTTCTGAATCCAAGGATTCAACCGACCACGGAACATGTAGTACGACTCTATGATTTATTTTTAAAAATCTGCGTATAAGTGGAACCATGCAGTTCAAACCCATATTGTTCAAGGGTCAACTATATCTTTTTGGAGAAATGTCTACTCAGATCCTTTGCCCATTTTAAAATTGGGTTGTCTGTTTCTTATTGAGTTATAAGGCCTCTTTATATGTTGTGGATACAAATTTTTTAGATATGATTTGCAAATTTTTTTTCCCATTAGCAGACGGTCTTTTCACTTTCATCTTAGGGTCCTTGGAAGCACAAGAGTTTTTCATTCTGATGAAGTTCAAGTTGTCTGTCGTCTTTTTTTCCTTTTGTCGTTTGTGCGTCCTGACCTATAGGTGACCTTAGAGCCCCGGCTCATCTCTCCAAGCTGACTCCATACAGATCAGCAGTTACCATTCAGTCTTTTTTAAAATTTTTATTGCATTATAGTTGACTCACAATATTGTGTTAGTTTCAGGTATACAGCAAAGTGGTTCAGTTATATATGTATACTTTTTCTGGTTCTTTTCCATTATAGGTTATTACAAGATACTGAATATAGTTCCCTGTGCTATACAGTAGGTCCTTGTTGTTTATCTCTTTTATATATAGTAGTATGTATCTGTTAATCCCAAACTCCAATTTTATCCACTCCCCAACCCTCACCCCATCTCCACTCCTTTCCCTTTTGGTGACTCTAAGTCTGTTTTCTTTGTGACTGCTTAGTCTTTTACTTTATGAGTCTGGACTCTGGATCTGGGCTGCTAGCACTCAAACCCCAGCTTATTCAGCCATGACCTTGGGCAAGTTAAATGTTCTGTACCTGTTTCCTCGTCTGTAAAACGGCGATGATGTTTATGCTGCTGGAGGTTCAAATATCTAAATTCATGTGAAGTGCTCACAACACTGGCTCTAATAACTGAAGTGCTTGTTGTAACACAGTACTGCCACCACTATAGTTGTGTTGTTGTTGTTGTTGCTACACAAATGTTTCCTATAGTATTACCATCAGTGTTGTCGATTCTGTTCTGATCTTCCGCCCATTTGCCAGATGAGGCCACTAAGGCCCAGGAAGTATCCCTGGCCAGTGAGCCCCACCCCTCCCCCATTCCTGGCACTCTTGAC EMBV3_17357 GTCTTCTAGTCTGTTATGGAAATTGTATAATTTGATAGAAGTTTATTCTCCATTGGTTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03339 GAGGCCATCCGTCTGTTGCGCAAGAATTTCCCCAGGCCGGGGCATTTGATCTCAAGGCTG Variant GeneID:510679|ALAD:NM_001014895:20_cdna 466^994 2 EMBV3_34324 GeneID:510679 8 GENE ALAD MGC137079 aminolevulinate, delta-, dehydratase EMBV3_39835 AGCGCTGGGCTCAGAACTGGAGTTTCCTGAAAGACTATGACCCCATGGTAAGACAAACCA Gene GeneID:510955|C11H2orf50:NM_001075480:108_cdna Constitutive 0 NULL GeneID:510955 11 GENE C11H2orf50 C2orf50 FLJ25143 MGC159479 chromosome 2 open reading frame 50 ortholog EMBV3_32911 CTTGAGGATGGGCACTTCTTCGATGCTTCTATCACCAAGCAGCACCTCTTTGCCTCGGTC Gene GeneID:514514|SLC26A6:NM_001076852:160_cdna Constitutive 0 NULL GeneID:514514 22 GENE SLC26A6 MGC142357 solute carrier family 26, member 6 EMBV3_36846 CCTCAATGAAGGCTATGCGAAGGACTTTGATCCTGCCCTCACCGAGTATGTCCAGAGGAA Gene GeneID:513483|FBP1:NM_001034447:9_cdna Constitutive 0 NULL GeneID:513483 8 GENE FBP1 FBP2 MGC128145 fructose-1,6-bisphosphatase 1 EMBV3_33436 GCTGTGCCCCAGGCTACCAGTTCCCCCAAGCCTTGTCTTTGGCCATGATGTTCACCTTCC Variant GeneID:507455|SLC44A3:NM_001098900:126_cdna 536^696 1 EMBV3_41895 GeneID:507455 3 GENE SLC44A3 CTL3 MGC157328 solute carrier family 44, member 3 EMBV3_02501 CATCCCATCCCAGCATCCTTTAATTATTGCTTGTCTTAAAATAACACTACAGATAGAAGA Gene GeneID:533233|APC:XM_002690404:66_cdna Constitutive 2 NULL GeneID:533233 10 GENE APC MGC140121 adenomatous polyposis coli EMBV3_18560 AGAAGAAGCTGCCGCTTTTCCTGAAGTTACCAAAACCAATTCCTACTCCCAAAAAGGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43404 GAAGAGAAAGATTGAGTTCCTGCGGCCAGGCTATAAGGCCAAGAGACAAAAGAGCCACAG Gene GeneID:510487|LOC510487:XR_083682:780_cdna Constitutive 0 NULL GeneID:510487 5 PSEUDO LOC510487 NULL similar to UTP20, small subunit (SSU) processome component, homolog (yeast) EMBV3_04371 GGGACCAGCAGCTGTCGCCGCCGCTCTCAGGGTGAAGAAACAATAGAAGTTTTTGTCCCC Variant GeneID:530618|SPOP:NM_001075936:123_cdna 154^199 3 EMBV3_41688 GeneID:530618 19 GENE SPOP MGC139890 speckle-type POZ protein EMBV3_23037 GGTGGAACTCTCCTGTTCTGACATCAGTATCCCTGCAGTTGTCACCTCATTTACAGCTGG Gene GeneID:516263|LOC516263:XM_002693118:533_cdna Constitutive 0 NULL GeneID:516263 15 GENE LOC516263 NULL similar to olfactory receptor Olr278 EMBV3_24525 TCATGTCGCGCTACGGGCGGTACGGAGGAGGGTTATTTGTGGTTCCCGAGTGAGAGTTGA Variant GeneID:507066|SFRS7:NM_001034277:62_cdna 135^315 1 EMBV3_25518 GeneID:507066 11 GENE SFRS7 MGC127028 splicing factor, arginine/serine-rich 7, 35kDa EMBV3_34418 CAGCCCAAGAAAAATCATGTAGGAGAAATACCCTATGAGTAGAATACATTTTGGAAGCCC Gene GeneID:767945|ZNF566:NM_001077017:787_cdna Constitutive 2 NULL GeneID:767945 18 GENE ZNF566 MGC128759 ZNF420 zinc finger protein 566 EMBV3_33547 ACCTGAAGCACGACTTCAAGGCGCTGAAGGAGAACATGAGCGACTACGCCATCTATGACA Gene GeneID:506604|ISG20:XM_002696514:113_cdna Constitutive 0 NULL GeneID:506604 21 GENE ISG20 NULL interferon stimulated exonuclease gene 20kDa EMBV3_09690 GGGTTGGCCTGTGAAAAAGCTTAGGATCCTCGTTCTCTGGGTTTTGGTGATGTTGGAGGA Gene GeneID:513061|ABCF2:NM_001046136:649_cdna Constitutive 0 NULL GeneID:513061 4 GENE ABCF2 MGC128735 ATP-binding cassette, sub-family F (GCN20), member 2 EMBV3_38063 GTGGTGCCACTTCCTAGCCCCACCTGAAATTCCTAAGAGTGTTTTTGAGATTGCTTGGGG Gene GeneID:781063|TBX3:XM_002694588:669_cdna UTR3_Alt 2 NULL GeneID:781063 17 GENE TBX3 NULL T-box 3 EMBV3_38156 ATCGCGCCAAACGGAGCCCAAGTTCTCCAAGTGAAAAGAGGGTGGAAGCTGCAAGTTTCT Gene GeneID:618138|PEG10:NM_001109815:66_cdna Constitutive 0 NULL GeneID:618138 4 GENE PEG10 NULL paternally expressed 10 EMBV3_14518 CAATTTTGTATTTATCCAGGTGGCTCAACTGCAGCTTACCTAGACATCGACGATGCCAAC Gene GeneID:785666|LOC785666:XM_002692177:100_cdna Constitutive 2 NULL GeneID:785666 13 GENE LOC785666 NULL similar to Uncharacterized protein C10orf18 homolog (Peripheral benzodiazepine receptor-associated protein 20) EMBV3_01030 GCACTCATGTAAATATGGAGTAAGTATTGTATACTATTTCATTGCTGGGGATTGTGGGTG Gene BVT0102_145235 + 0 NULL GK000013.2:51989203-52003103 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045432 TCONS_00045438 TCONS_00045434 TCONS_00045435 TCONS_00045441 TCONS_00045429 TCONS_00045431 TCONS_00045436 TCONS_00045430 TCONS_00045433 TCONS_00045437 TCONS_00045439 TCONS_00045440 1 XLOC_026436 Coding TCONS_00045434 XLOC_026436 Coding Coding ATRN 13:51999011-52068825 j TSS33159 5319 1 TCONS_00045434_2 335 11 0.923968315356739 0.000808004442767939 1.81563066841602e-06 0.000345341090176414 7.47799256431938e-11 0.000512604586465324 0.000356136672653655 0.000469361838614571 0.00049512624905454 0.000197452181516364 2.64352604863061e-13 1.6379677670491e-13 5.89439764925331e-13 1.09100339944221e-13 3.6365591882987e-11 0.000213486276152117 0.00157495290331968 0.00362726722491351 7.33247092774542e-21 0.000239373745318842 0.00154728386135429 9.57128933187184e-08 5.40957322588816e-13 3.92685856138456e-06 0.000292138515945856 3.26060370640302e-08 0.00120988102468335 0.001055131546282 1.21962023869092e-07 2.64987033197124e-32 1.51870441220026e-43 XM_005214484.1 ATRN PREDICTED: Bos taurus attractin (ATRN), transcript variant X1, 0.0 2435 100.00 0.253619101334837 NM_139321.2 ATRN Homo sapiens attractin (ATRN), transcript variant 1, mRNA. 0.0 3892 79.79 0.825343109607069 TCONS_00045434_2 sp|O75882|ATRN_HUMAN ATRN_HUMAN Attractin; 0.0 665 99.07 0.955223880597015 0 coding 0 0 0 0 -0.0648490504714203 0.738502217503584 0.0183604164690273 0.767745512973543 GTGCTGAATCCTGGAGGGCCTCTGAAACATGACCTGCCATTGGAATCCGCTCTCAGCTCTGAGCCCTGCATGCAGGTGCAATGGACATGCGTCGCTATGCAATACCAACACGGGCAAGTGCTTCTGCACCACCAAGGGCGTCAAGGGGGATGAATGTCAGCTATGTGAGGTAGAAAATCGATACCAAGGAAACCCTCTCAAAGGAACGTGTTATTATACTCTTCTTATTGACTATCAGTTCACCTTTAGCCTATCCCAGGAAGATGACCGCTATTACACAGCCATCAATTTTGTGGCGACACCTGATGAACAAAACAGGGATTTGGACATGTTCATCAATGCCTCCAAAAACTTCAACCTCAACATCACCTGGGCTGCCAGCTTCTCAGCTGGAACCCAAGCTGGAGAAGAGATGCCTGTTGTTTCAAAAACCAACATTAAGGAGTACAAAGATAGTTTCTCTAATGAGAAGTTTGATTTTCGCAACCACCCAAATATCACTTTCTTTGTTTATGTCAGTAATTTCACCTGGCCCATCAAAATTCAGATTGCATTCTCCCAGCACAGCAATTTTATGGACCTAGTACAGTTCTTCGTGACCTTCTTCAGTTGTTTCCTCTCTCTGCTCCTGGTGGCTGCTGTGGTTTGGAAGATCAAACAAAGTTGTTGGGCTTCCAGACGTAGAGAGCAACTTCTTCGAGAGATGCAGCAGATGGCCAGTCGTCCCTTTGCCTCTGTAAATGTCGCCTTGGAAACAGATGAAGAGCCTCCTGATCTTATTGGGGGGAGTATAAAGACTGTTCCCAAGCCCATTGCCCTGGAGCCGTGTTTTGGCAACAAAGCTGCTGTCCTCTCTGTGTTTGTGAGGCTCCCTCGAGGCCTCGGTGGAATCCCTCCTCCTGGGCAGTCCGGGCTCGCAGTGGCCAGTGCCCTGGTGGACATTTCTCAGCAGATGCCAGTCGTCTACAAAGAGAAGTCAGGAGCAGTGAGAAACCGAAAACAGCAGCCCCCTGCGCAGCCTGGGACCTGCATTTGATGCTGGGGCCGGGACTCCCTGTGAGCAAGGAGTGGCGTGCCAGAGCCGTCTGCCAGGAGGGAGCAGGCAGGGAGAAGATGCTATGCGGGGCTGAAGACTGGAAACCCTCGAATCATCCACCTCCTCTGCATGTTCACAAGCTTTCTTTGACAGTTTCTCCCATCTGTACTCCAGCATCTAACCTTTTACTTTCGTATAGGAAATAATTGATTTCGTTACAGGTCTGGGGTGATCCAGTTGTTGCTGGAGGAGGCCGGTGTAGAGCGAGTGAGAGAGCTAGGAATGACACTCAGGTTCACTTGTGGAAAACTGTCCTTGGGACTGTCTCAACTGTGCAAAAAACAAAGATGTAGTGTTTACAAGTAGACATTTATCATCAGTCATTCTTGAATGTGGTCTTTTAAAAACTAGTCAGATGAATTAACTTTTCATCTGAAGCCTGCTATCTTTTTTAAAAGATGTGCTATTTATTCTTGCACGATTTAGGCAAATATCTCTCTTCCAGGGAGTAACTTTTTTTCTAGTTGAGAATTAATAATGGTCCATCTCTTTTGAATCATAAGATAGAAGGGGGCTATTTTAAATGTCAAGGTCAGCAGTGTTACTTGGAATGTAAACTGATGTAATATGTAGTTTTCTGTAGCAACGTGATTAATTTAGTCTTAATCCATTTAAGGTTCTCTCTCTCTCCCTCCCTATCCTTCTCTTTCCTCTTTACCTCTCTCTGTCTCTCTGTCTCTGCCACTCACGCTCTCTCTCTCTCACACACACACACTAAGTGCCTAGACTTTAAATAGATCTAGCAATTGGAAAGTTAGTAAGCATAAGTTTTTACATAATTGCATTCCTACATTCTTAGAAAACTTAAACAGCTATCATTGGCAATCTGCTCTTTTATAAAATCTAATTTGCAGCCAGGAAGGTTTTCTCACCCCAAGAAACATTTAATGTAGCAGGGATTGAGAGGAAAGCAGAAAGGACCTAACTGTGAATGCTCCTGTTTTTCAAAAAGGACACTAGGCATGTTCCCATGTGCCTCCCTGCCCCAGACTTGGCCTAATGTTTGCTTCAGCCCCTCTGGCCACTCCTGCCCAGGCACTGCAGAGGGAGGGGCTTGCTCATGTTACATGTCTCCCTTGAGCTGAAAAGAGCATGACAGCACTTGGGACTCCTTGATCAAAGAACAGCATTTGTTTCTGTAGCCTGTGTAAGGTGGTGGGTCATTCTTCATTCCCAGGCTGCAGGTGGAGTGCCAGGAGAGGCTCGGTCTCCTGTTGTCAGGCAGAACCTGCCCAAAGCCTGGAGAGCAGCCTGGAGCTGTTGGTCCTCTTTCCCCCAGGAGGGACCCAGGCCTCCCATGCTCCCTCCTAGATTCAAGGGGTGGCTGTGGGGAGGGCAGTGAGTACTGATAAGGATGAAAAGCATGAGAAAAATGGACAAGGAGAGAAAACCATGCCAAATGAAGTGACCAAATTGAAGTCGTGACCAAATTGAAGTGGGGTAGGGCAGTCCCTGCTCGTCTCCCCAGGCCACTGCCGGGATGTCGTGTTGTCCTGTCCGTGGTGCTCTGTATTCTGGCATTATGCAGCAGCCTCCCAGGACCTCTCTTCTGCTTCAAAACCCAGGAGTTCTCTAGCATTACCCTGGGGGGAAGGGGGGGTAATGTGCAGTGTGCAGAGGCTCAGGAAGGGTAGACCTTTAGACAACAATGCTCAAGTTTGTGAATTTGGAGAAATTAATACTCAAAAGAGCAAAACTGTGGCATTTCACCTTTATGTGGAGTACCTAGAGAGAGGGAGTATTATCTCTTCCCCAACACTAACCCCTCCCATGAAGAATTGCCTGGAAAGATGTTTTCAAGGATGTCGAACCATAAAACACTGTCTGATGCACAAAACACCTCTACTTTGAGACTTGCCTCTCAAAATGCTGCTTTTTCACAACATTGTTAAAGAGCAGACGGTTCTAGAGAAGATCCCTCCTCTTAGAAGCTCCCTACATCTCTGCTCCAGATCACGGTATCCCCAGAGAGCCTGCCATGGACTGGCCCTTCACCCTGTAATTACCACGAGGCCATTGGAGAGGACCCTCCCACAAAGGAAGTCCTTGTTTGTTCAAAGGACTAGTGTTTGCTTGGCAAAGAAGCCTCCTCCCCATGGTAGTTCCATGCCTTGAAATAATAAGCACCGTGTCCCATAGCCACCTGGTTTTCTTTTTTTCTAAAAGATAATGTTTATTTTTTAAAAGGACGGAAGGAGCAAGTGAAGTTTAATTCTGCTCCGACAGTAGAGAAACAGCTGAATCCAGCTGCTTCTCCTTTGCAGCCAGTAGCAAACAGCTTTCTGCAGGCTTGGGCCAGAAGAAGGGGGTGGCAGGAGAAAGAGGCGCTCAGCTTAGAGCCAGTTACTGAGAGGAAGTCATCTGGAACTTCAGAGCCTGTATGTAAATTAAAATAGTTATGAAAACATAGATATTGCACTTGTACATAACTATACAATAGTGTCCGAATGTTTGGACAGTCAGAGTGTACATAAAACAAAAATATCTTTATGTATTTTTATTAAACATAACGGTGTCCAAGTTTGACCTAATGTGTTTTTGTGCCATATAATGGATATCCAGGCTCAGAGAAGTCCTCGTACAGTGATGATAAAGCCGAGACAGGCATCCCCGTTGTGCCCATGTGTTCAAATGCATCTGGGGCCAGTTGGATAACTTTTAAAGCAGGACTCGTCTGTCAGTGCACGTATGAAAGTGTGGGCAGCGTGTGAAGAGGCTCGCTGGCAGCTGCAGTGTCTTTGTCACTGTCATCAGCTCTGACGTGCATCGTAAATCTTCCTGTCGGCCTCTTGGTGCTGTGGGTAGCCGGGAGTAGACCAGTCTCGTCCTGAGAAACGCTTCTCTTAGACTTAAGATACAAAGACTACACCGTAGATCTAGTCAGATTTTCCAAAAGGGGGTTTTTCAGGCTGCATTTTGTTGTGATTTTGTGTAAATTTTTGATGACCATTTCCTAGGACCATAGTTAACTATACTGCAAACTGGGGGTGGGAGTGGGCAGCTGCTTTGTTGATAATTAGCTCCTCCTGTTTCCCCATGGAGAACCTCACCCTTGCCTCCTGCCCCCTTCCCATACTGTTTGGGGAGAAGTCTTTGTTTCCTGTGAGGATCACCTCTAAATGTGGGAGGAGGTGTGGAGAGAAAGCAACCATATGCTGCCTGAACTAACCTGGAAGAAAAGCAGCCCTGGACAGACTCTGTCAGCATAGGGAAAATACTGGAATATCAGTGGTAAGGCCTGAGGTAACAAGATTGGAGATGCACCAGGAAGTCTGAGGCAAATGGAAAGACCAAAGCGGTATTTTAGAAAAAGACACTTTACCTTTCAGTGCAAATCTTGCTCCTTCAACTTAGTAGAGTGTATTTAGAGATGGGGTGGGAATGATTCAACTATTCACTAAGTACTTCACTGACAACCTAAGCTAACACTGGGGCAGTGACAGATGGAAAAGCAGCTCTTGAGAATTACAGCAGAATCCAGCTCCTCAAACCTGTCATCCCAGGAGACCTTTCCTTGCAGTGGTTTCTGTGAGAATTGGCCCCCTGAGGACAGACCCAGGAAGGCGGAGGGTCTAGCCTTGGACCGTGCACCGGCTCTCAGCCTGAAATGTTTACTCAGTTTACCAAATGGCTCAAACCATAAAAATCACCGTGATGGTTTGTAGATAGCCAAGCCCACCAAGGGATGTTTCCCCTGAGTTGTCCAAATTCATGAACACCCTTCACCTGCAGGGAGGTGATCTGTTGGAGAGGAGAGGAAAACTGGCGCCTTCTCTTTTAAAGGCAATAATGGAATTGACTTTCAATAACTGAATTTGTGCACAAAACATTCTAAACACTAGTGAAGCCTGTTTTGTTGAACTAATTCTGGCTCTGGAAATGTTTTATAGTTATTTACAGTTTTGTTTTGTTCGGGGAGTTTTTGGTTTGGATTCAAGCTTAGTTTGTTAATATGTATAATTTAGCATATATTGCACTCATGTAAATATGGAGTAAGTATTGTAAACTATTTCATTGCTGGGGATTGTGGGTGTTATACATACATTTAGGACTGCAATTTTTTGGTATTTTTTGTATTGTAAAATAACAGCTAATTTAAGCAGGAACAAGAGAACTAGGGGAGGTCTGTGCATTTTAAAAATAAATGTGAAGAACTTGTATATAAACAAGTAAATACTATAATATGAACTTCCTTCTGAAATAAAAGTAGATCTGATAAAAAT EMBV3_25654 GCATCTGAAAACTCCCGTAACCTGGGAAGGAAACTGACATTCAGGTCCAGGAAGCTAGAG Gene BVV0102_146573 + 0 NULL GK000014.2:79581284-79695641 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33765 GACGACTAATGATTTTGATGGAGACGTTGCTTACCTACTTTTTTAGGGGGACGGATGCGC Gene GeneID:513446|BANP:NM_001075620:225_cdna Constitutive 1 NULL GeneID:513446 18 GENE BANP MGC139655 BTG3 associated nuclear protein EMBV3_30550 GGAGTGCTCCATCTGCTTCTCGGGCTATGACAACATCTTCAAGACACCCAAGGAGCTCTC Gene GeneID:100301430|LOC100301430:XM_002694191:681_cdna Constitutive 0 NULL GeneID:100301430 16 GENE LOC100301430 NULL hypothetical protein LOC100301430 EMBV3_39003 ACTGGGAGACTTCGGACGTGCCCTTTTACCTTTGGTCACACCGGGCATTTCATGTGTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38192 GAAAGTCGTCTACCACGGTCCTGCCTCAGTACCTCATGCCGAGACCCCTGGCTCTCCCCT Gene BVT0102_007263 + 0 NULL GK000008.2:105220440-105254947 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234209 1 XLOC_143688 NonCoding TCONS_00234209 XLOC_143688 NonCoding NonCoding - 8:105222580-105223423 - TSS175713 843 1 TCONS_00234209_3 116 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.90996115075147e-06 9.39913411159012e-05 0 0 0 0 0 0.000404925004082216 0.000337361524401817 3.97736137460932e-05 0 0 0 0 0 0 XM_002705068.3 AKNA PREDICTED: Bos taurus AT-hook transcription factor (AKNA), mRNA. 0.0 1521 100.00 0.998813760379597 NM_030767.4 AKNA Homo sapiens AT-hook transcription factor (AKNA), mRNA. 1e-81 307 69.26 0.998813760379597 0 noncoding 0 0 0 0 -0.0815180596296519 0.481316018354788 -0.00728428144354029 0.883765326859659 TTTTAAAGATCAATATTCACTTTTATTTATTTGCTCTCATAACGAAAATAGATTTTTTTAATGCCCCAAATATACAAATATCAGTGATGCACACACATTCCAGAAAAGCTGAGGTCTGAGCTGCTACAGGGTTGGGGAGCAGATGGCCTGGCCTCAGGGGCACACACCGGGAGCTGGCAGGAAGCTGGCCACTGGCCCAGTTCCACAGGAGTCCGAGGGGAGAGCCAGGGGTCTCGGCATGAGGTACTGAGGCAGGACCGTGGTAGACGACTTTCCGGGGCCCCCAGTGGGGTGTCTCCATCGCAGCAAGCCTGTGGGAAAGGCTGCTTGACCATGGGGAAGCTGGGTGCTTCTAAGATATTCCAATGGCCTCAAAGTACCCCACAGACCGACCACCAGTCACCAGAAGGAAAGTCCCCGGCCACGTTCTTCCCAGAGACGCCTACTCTGGAGTGGCTGGTCACAGGTGGGGGACAAGTTTTCACCAGAGACCCTGGCCCCGTCCCCTCTTATCTGGCCTCCTAAGAAGGATTCAAGGCCAGAAAAATGCCTCAGTTAAAGAAAAAAAAAAAACCTGTCCATCATATATAAAATACATATTATTAGCTGGAGATGGACGCGTGCAGGCCAGGGGCCTCCCAGAGATGGCGTCTGGGCAGAGGGTGGCCTCAGTCCCAGCCTCAACCTCCTTCAGGGCTAGGAAGTGGCTTCTCTGAGTCACCCACTGCCACTTGTTCCGTTTTGGAAGCACGGAGGCTGAGAAGGCAGGGCCCGGGGCGGAGGGAGCCTTCCTCGTGAGGGTCTGTGGGGCCTCTGGGAGTGGCTCAGCGCCCTCTGGCCTGG TCONS_00226585 . 3' 2142 TCONS_00226585 . 3' 2984 EMBV3_39946 CAATTGACAAGAACTCCCTCCGAAGCCCAGGGGTTGGTTCTGCGTTCGACCTGCTTTTCC Gene GeneID:513059|ATAD5:XM_002695660:133_cdna Constitutive 0 NULL GeneID:513059 19 GENE ATAD5 NULL ATPase family, AAA domain containing 5 EMBV3_43239 TATTTTCCATGTGGTGAGGGTCTTTGTGCCTGTGGTTGGTTATCTTAGAGCTGGAGCTGC Gene GeneID:508867|AP3S2:NM_001075376:96_cdna Constitutive 0 NULL GeneID:508867 21 GENE AP3S2 MGC139176 adaptor-related protein complex 3, sigma 2 subunit EMBV3_43059 AGGACAGCTCACAGCACACATAACTAAAAACACAGCCTATAGTACGTTCCAGCCGGGGCT Gene BVT0102_334387 - 1 EMBV3_41014 GK000003.2:16088724-16090133 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168713 TCONS_00168716 TCONS_00168712 TCONS_00168720 TCONS_00168717 TCONS_00168718 TCONS_00168710 TCONS_00168715 TCONS_00168719 TCONS_00168711 TCONS_00168714 1 XLOC_103168 Coding TCONS_00168711 XLOC_103168 Coding Coding UBE2Q1 3:16079606-16089727 j TSS126470 2749 1 TCONS_00168711_3 253 13 0.729644268774704 0.0388677474095514 0.0411495854168432 0.0377613211254091 0.0219198534277758 0.0305558255403584 0.0105808570277712 0.0178479214279024 0.0272293715037154 0.0290756448774744 0.00586821355405695 0.00125084901851888 0.00201765937885068 0.00494069879151171 0.00993291234028219 0.00658234288217167 0.0166352075005222 0.00362409683860642 0.0202218535502675 0.0382008700236947 0.0285321560955196 0.0156106436666978 0.00575672568877959 0.00630134357119383 0.00766294534689622 0.0452738180519303 0.0505606039770876 0.0373679521507857 0.00221354140381891 0.00138781221935618 0.00417248278528828 NM_001206320.1 UBE2Q1 Bos taurus ubiquitin-conjugating enzyme E2Q family member 1 (UBE2Q1), mRNA. 0.0 4910 100.00 0.989814477991997 NM_017582.6 UBE2Q1 Homo sapiens ubiquitin-conjugating enzyme E2Q family member 1 (UBE2Q1), mRNA. 0.0 2870 83.09 0.989814477991997 TCONS_00168711_3 sp|Q7Z7E8|UB2Q1_HUMAN UB2Q1_HUMAN Ubiquitin-conjugating enzyme E2 Q1; 0.0 520 100.00 0.99604743083004 1 coding 1 1 1 1 -0.0570853333347993 0.876267127269067 -0.0201053060010662 0.67421455514988 CCAGAGCAGGAAACACGGTCCCGCGCAGGAGTCATACCCTGCGGTGCCCCCCATCTGGTCAGTGGAGTCCGATGACCCTAACTTGGCTGCTGTCTTGGAGAGGCTGGTGGACATAAAGAAAGGGAATACTCTGCTATTGCAGCATCTGAAGAGGATCATCTCCGACCTGTGTAAACTCTATAACCTCCCTCAGCATCCAGATGTGGAGATGCTGGATCAGCCCTTGCCAGCCGAGCAGTGTACACAGGAAGACGTGTCTTCAGAAGATGAAGATGAAGAGATGCCTGAGGACACAGAAGATCTAGATCACTATGAAATGAAAGAGGAAGAGCCAGCTGAGGGCAAGAAATCTGAAGATGACGGCATCGGAAAAGAAAACTTGGCCATACTAGAGAAAATTAAAAAGAACCAGAGGCAAGATTACTTAAATGGTGCGGTGTCTGGCTCGGTGCAGGCTACTGACCGGCTGATGAAGGAGCTCAGGGATATATACCGATCACAGAGTTTCAAAGGTGGAAACTACGCAGTCGAACTCGTGAATGACAGTCTGTATGATTGGAATGTCAAACTCCTCAAAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCATCCTACTTAACTTTTCTTTTAAAGATAACTTTCCCTTTGACCCGCCGTTTGTCAGGGTTGTGTCTCCAGTCCTCTCTGGAGGGTATGTTCTGGGCGGAGGTGCCATCTGCATGGAACTTCTCACCAAGCAGGGCTGGAGCAGTGCCTACTCGATAGAGTCAGTGATCATGCAGATCAGTGCCACACTGGTGAAGGGGAAAGCACGAGTGCAGTTTGGAGCCAACAAATCTCAATACAGCCTGACAAGAGCACAGCAGTCCTACAAGTCCTTGGTGCAGATCCACGAAAAAAATGGCTGGTACACACCCCCGAAGGAAGATGGCTAACCCAGGAGTGCCATCCCCTTCCTCCTTCCCCAGGCACCACTGGACCAATTACCTTTGAATGCTGTATTTGGATCTCACGCTGCCTCTGTGGTTCCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATGGCTATTCTAAACGCTAAGGAAAAAAAAAAAACAAACACACACAGAACTGTTTCAAGTACTCAAGACTGACTTACAGACCAACCAACCACCTGGCTGGAACCCTTGCTAGCAGGCATTCTTATAAAAGAAACTTTCGAGCCTCCTTATATTGCTGGAAACTCAGCTGTGCTCCAGACTAGAGCCTCCTTACCTATGCTATGGATTTTTAATTTATTTTCTCTTATTTCATGTACACTGCTTTTTTTGGTTACAGTGTATGATGGATGTGTATGAAAAAAAAATGTATCTTTGGGAAAACAATTACAGTTTGTTAATTTGAAGACGCTGGTTTTGACTCATCTTTATTTTCCTAGCTTACCCTTCCCCCGTCCCCTGAATTCCTTGAGCAGTGGGGGGAGGGGTACCAGGTTCACTGTGGCTTTGGGAGCCATGAGGGGCTGCACTTCACTGCTGAAGCCAGAGAAAGGTGGAGCTGAAGCACATGCCTGCCACAGCTTGAAGGGCTCTGGAGTGACCAGTCTTGCACCCCTGGGAAGGCAGAGCTCGGCCTGCTAAAGCACAGGCTGAAATGATGACCCTTATTCTTTAAAGCCTTCTAGTCACAGATGTTTTCAAATTTCTAAGAAAAATAACGAGGAGGCCTAAGAGGCTGCTTCACAGAACTACTTTTAAATGAACTGAATAGGGCTGGGGCCACAGTCTCAAGCATGCACGTGGTCCTTCTGATCTCAGCAACAGGCTGTGGAGCTACCATTTGTGCTCACTGGTCCCCCTTCCCAGGAAGTGGCACTGAAGGGCAGTGGTTGGAAGCTCTGTTGCTGCTGCTCTTGTCTGTTGCTTCATTTATGCTTAACAGAGAAGCCAGGCAGAGCTCCGAAGTAAGTTGTTCGGCTTGGAGACTGATTTCTTTTAAGGCACTTTCATAGCATGGGTCCTACTGGAGAGGATTAGCTTTGAGGGGTTTGGTCTGCCTACCTACGGGCCCTGCTCAGGCTCAGAACCGCTGTGGAGGCAGGTCCATGAGCTGACCTGTTGGTGCTGGGTCTGTCCCTGCTGTGTCAGTACAGCTGTGCCGCCTGCCCCTCCTGGTCCGTGAGCTTGCTTGGGGGCAGAGACAGCCTCCTGGAACCTGCCTGCGGACCAGATGGTGACAGACGCCAGAGGCCAGGGGTGGCCAAGTGAGGGTGTGTCTTAGCTCAGACTCGGCACAGCCACCTGAAACCTCTAGGCTGCCAGAGTTCTGTATGCTTTGACACAGCTATTCTAACTTTGGTCACTCCCCGCCACCCCCAATTAAGGGATTTTCATGTCTTGCTGCTTCAGGTGGACGCAGAGTTCACCGGAACCACTCAACGCTGCTCTAACCCTACCACACCCACCTGGTACAGGGTGCTCATTATGCTGAGGTGGAGGTAAAGAGGGCAGGCACCCACAGGAAAACTCATTTCATTGAGCTGAGATCTAGTTCTCAAGGCCTCTGCCTTTTCTCTGAACTTACCACCAGCCCCGGCTGGAACGTACTATAGGCTGTGTTTTTAGTTATGTGTGCTGTGAGCTGTCCTCTGTACGATGTATTTTGTAATGTATTTTTCTCATCTACCAAAGGATGGAACAAATAAAATTATTTAAATA EMBV3_07096 TGTTCTCATCTCTTAATTTATTTGAAATTCATTGGCTTTTCACAGGTAAACTCAGGGGAG Gene GeneID:540802|ASB3:NM_001076927:167_cdna Constitutive 4 NULL GeneID:540802 11 GENE ASB3 MGC142427 ankyrin repeat and SOCS box-containing 3 EMBV3_21101 TTGTGATCAGTTAAAAGTGGTAGAATGTATGATGAAGAAGAGAAGGATGATGGTGAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28782 GAGATAAGTGATCCCAGAACTCTAAAAGATGTCCAGCTTCAATCGCAGCCACTAACTGTA Gene BVV0102_023375 + 0 NULL GK000001.2:134372332-135191076 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005324 TCONS_00005323 TCONS_00005326 TCONS_00005325 1 XLOC_001242 Coding TCONS_00005323 XLOC_001242 Coding Coding - 1:134392040-134408405 - TSS2645 2773 1 TCONS_00005323_6 695 3 0.830725983867025 0.000107917331016085 0.000170311751893597 9.86762244273054e-05 0.000116775271376766 0.000217205596698054 0.000140459359609096 0.00017033953980557 0.000149296433232347 0.00025238315262774 2.07646097292382e-05 0 4.51244682972527e-05 1.02874352516085e-06 8.31126592189301e-05 7.9608617741838e-05 0.000542851381361497 5.38532490710581e-05 2.60846148404702e-05 9.82540207665255e-05 0.000108818511014513 3.61208320241261e-05 0.000435896157621076 3.78291423203568e-09 0.000114833831577462 0.000214860552737115 9.65423407331581e-05 0.000240896084283142 3.01643364408099e-06 0 8.71871601821851e-09 XM_005201921.1 LOC787607 PREDICTED: Bos taurus serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like (LOC787607), transcript 0.0 4780 100.00 0.955283086909484 NM_002718.4 PPP2R3A Homo sapiens protein phosphatase 2, regulatory subunit B'', alpha (PPP2R3A), transcript variant 1, mRNA. 0.0 3094 87.87 0.886765236206275 TCONS_00005323_6 sp|Q06190|P2R3A_HUMAN P2R3A_HUMAN Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; 0.0 1167 87.01 0.961151079136691 0 coding 0 0 0 0 TAGACCCCAGAACCATCACTTGTCCTGTTTTTCCAGAAGAGAAGGCGAATCCCAGTGAGAGCATTGACTTGACCATCTTACTGAGCTTGTCAGTGCAGAAGTAGAAGCTGGACGAGGAACTCCTGCCTGCCCACCTGGTGCTTTTTCCCTCAGCCACATTTCCTCCTCCTCCACTGGAGTAAAGAAAAAAGTTTTCCTGTCATTCACAAAAAAATGGATCATTTAAGCCTTTGGAGGACTCAGTTATCACAGTACTTCTATACTACCAACTGAGATTTATAACAGTACATTTATGACCATAAATGTCTGCATCATAGAACTGCTGAAGAACTAAAAGAGAATATTCCTTATTCTTCTTAAAATTTATTCCTAAAAATAATCCTATAGTATTATGATATTACTAAATGAAACTAGAAAGCAAGCACAATTATTAAATTATTAGACTGATACAAGCACGCATGTGCAACAGCTACTGTATCTGACAGTTACCAAACCTCAAATTTTGATGATTTCCCTTTGCGGGAAAGGTCATTATATTTGCAAGAAACCACTGAACATTGTCAGTCAAATATATTTTTAGCTGAGTGTCATTTAGGAGAATTTACTTGAAACAAGTTCTAGAAAATTCTACATCCTACCACTCAGTGGATTTGATATTATGGCAGCAACTTACAGACTTGTGGTTAGTACTGTGAACCACTATAGCAGTGTGGTGATAGACCGGCGTTTTGAGCAAGCGATACATTATTGCACTGGAACCTGCCACACCTTCACACATGGAGTTGACTGCATTGTGATACATCATAGTGTTTGTGCAGACCTCTTACACATCCCTGTGTCTCAGTTCAAAGATACAGATCTGGACTCTCTGTTTCTACCCCATGAAAATGGGTTTTCCTCAGCTGAAGGTGACTATCCCCATCAAGCCCTCACGGGCATACCCAAGGTCAGGAAAGGATCTACATTTCAGAGTACCTGTAATTTAAAGGACATTGCAGGAGAAGCAATCAGTTTTGCCAGTGGGAAAATAAAAGAATTTTCCCTTGAAAAACTCAAAAACTCTAACCATGCCGCTTACAAAAAGGGAAGGAAAGTTAAATCTGACTCATTCAACAGGAGGTCAGTTGATTTTGACTTGCTCTGTGGCCATTATAACCATGATGGGAACTCTCCATCCTTTGGTTTACTCCGGAGTTCCTCAGTTGAGGAAAAATCTTTATCCCGTAGAAACTCACTCGATACAAATCTGACTTCAGTGTTTCTTCACAACTTCTCTGAAGAAGACCTGGTTACTCAGATTTTAGAAAAACATAAAATAGATAATTTTTCTTCTGGTACAGATATAAAGATGTGCTTAGACATCTTGCTAAAATGCTCCGAGGATTTGAAAAAATGCACAGACATCATAAAACAGTGTATAAAGAAAAAGACAGGGAGTAGCATCAATGAAGGAAATGGTAATGATGCAATTTCTAGCTCTGAAACTGTCTATATGAATGTAATGACCAGGTTAGCATCCTACCTGAAAAAGCTACCATTTGAGTTCATGCAATCTGGGAATAATGAGGCTATAGATTTAACAGAACTGGTCAGTAATATGCCTAATTTACAGCTGACTCCCTTTTCCCCAGTATTTGGCACTGAACAGCCCCCCAAGTATGAAGATGTTGTCCAGCTCTCACCCCTTGACTCTGGACAGTTTCAAACTATAGAACTGCAAGATGACCAGCACAGTTATAGAAAAACAGACACTATAAAACCCATTCCAAATAACTCTACAAATTCCTTATATAATTTAGAGATAAGTGATCCCAGAACTCTAAAAGATGTCCAGCTTCAATCGCAGCCACTAACTGTAAATCCTTTAGAAAATGTTTCTTCTGGTAATCTCATGGAAACCCTATATATTGAAGAAGAGTCAGATGGAAAGAAAGCATTATATCATGAACAGAAGACAGAAAATGGACCCTCTCAGGAGTTGATAAAGGTAAATGAAGATAGAGCAGAATTATCAGACCATGGTACTCATCTTAAAAAATGTCCTGCCTCAATGCAAAATGAAATTGGTAAGATATTTGAGAAATCAGTTGTTAGTCTACCTGAGGAAGATCTTAAATCTAAAGTTCCTAAAGTTGAAGAGGAAAACCACAGAGATTTTATTAATTCTAACAGTCAGGAAGAGATAGATAAATTGTTAATGGACTTGGAATCTTTCTCACAAAAGATGGAGACCTCTCTAAGAGAGCCACTTGCTAAAGGTAAAAGCTCTAACTCTCTAAATAGTCAGAGTCAGTTGATTGATCAGCTCCCAGATCTTGAGCCTAAATCTAAAGTCTCCTCACCCACGGAAAAAGTGTCACCTTCCTGTCTAACAAGGATTATTGAAACCAATGGACACAAAATAGAGGAAGAGGATCGAGCCCTCTTACTGCGGATTCTAGAAAGCATTGAAGATTTTGCTCAAGAATTGGTTGAATGCAAATCAGGCAGAGGGAGCCTATCACAAGAAAAAGAGATGATGCAGATTCTACAAGAAACCTTGACAACTTCCTCCCAGGCCAATTTATCAGTCTGCAGAAGTCCTGTTGGTGATAAAGTCAAAGATACTACCTCAGTGGTTTTGATTCAGCAGACCCCAGAGGTGATCAAGCTGCCCCATTGCCCCATCTGGAAGATGTGGCTTAGGAGTTCACTGAAGAAGGCTAAGAAAGAAATGGAGCTTTTAGCCACCTTGCCCCACTCTTGACATAATTCCCGTCTGCTCACAGCCCAG TCONS_00005322 s 5' 19710 TCONS_00005322 s 5' 19832 EMBV3_03235 GTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAG Gene GeneID:100313378|MIR411:NR_031068:88_cdna Constitutive 0 NULL GeneID:100313378 21 GENE MIR411 bta-mir-411 microRNA mir-411 EMBV3_00839 AAGAGGTGCTGTTCCCCCAATCTGACAAATTCCACCCCTATATGGAAAAGGTGGTGCCCT Gene GeneID:507778|IL22:NM_001098379:25_cdna Constitutive 0 NULL GeneID:507778 5 GENE IL22 IL-22 interleukin 22 EMBV3_22041 GAGAAGCGTTTTCCGTGTGAATTTTGCGGACGGGCGTTTTCCCAGGGCTCTGAGTGGGAA Gene GeneID:515561|ZNF462:XM_002689904:5_cdna UTR3_Alt 2 NULL GeneID:515561 8 GENE ZNF462 NULL zinc finger protein 462 EMBV3_24259 TATTTCTGGACACCCCGTTCCTCTGGTGAGGCTGAGTCGAGGAGGTTCCCCTCAGTGACT Gene BVT0102_017703 - 0 NULL GK000008.2:9819885-9832640 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226892 TCONS_00226895 TCONS_00226893 TCONS_00226894 1 XLOC_138108 Coding TCONS_00226893 XLOC_138108 Coding Coding EXTL3 8:9830074-9894292 j TSS169512 6234 1 TCONS_00226893_6 919 7 0.90303190743884 0.00303781621045945 0.000630240266452298 0.0026961088573662 0.00262348326198689 0.000164175660083287 0.000328896292128476 0.00142627261869644 0.000742526308745221 0.00145707366271352 0.000131290831493807 5.8869792727057e-09 5.3410954789209e-05 4.76556779030739e-11 9.21843755307699e-10 5.71328064758788e-09 0.00158766461042369 0.000392704137573281 0.000155650298787167 0.000990392350658825 0.00397120956690728 0.000765174341065505 0.00100911080741969 7.20582666764794e-05 0.000468109695801369 3.30440395250115e-06 0.00347166771325596 0.00266494991563216 6.63291247244401e-10 0.000117324447710573 5.7328193269697e-06 XM_005209868.1 EXTL3 PREDICTED: Bos taurus exostoses (multiple)-like 3 (EXTL3), 0.0 1.124e+04 100.00 0.999358357394931 NM_001440.3 EXTL3 Homo sapiens exostosin-like glycosyltransferase 3 (EXTL3), 0.0 4237 83.76 0.637471928136028 TCONS_00226893_6 sp|O43909|EXTL3_HUMAN EXTL3_HUMAN Exostosin-like 3; 0.0 1847 96.95 0.998911860718172 2 coding 0 0 1 0 -0.0137314839807126 0.908404779115005 -0.0396780644032404 0.591182155876744 GGGAGAGAAGCCCCGGAGGTGACTGTTTCAGGAGATGACGCACCGAAGCGCAGTGCTGCGTGAGCCAGAGAGGAGGGGCCTGAGCCACAGGGCCTGAATATTGGCAGTGACACTTAAGAGGCTGGCATTTATTTCTGTTCTAACCAGCTACCTTATAACTGTGAAAAGTAACTATGCATATGTGTTGGTCAGCGAAACCAAGGAACAAGAGCTATGGCGGTTGAGGAGGTCTGTCTGATTCCGGGGTGCTTTTCCCTGGCTCCACCATCAGGGACCTTCGCCCTCCCACCTCAACAACCATGTGGTACCCTCTGGCTTTTGATAGAGATTAAGGACATGTTCTTTGGCCTACAGCTAGAACTCAGAATCTGCTGGAGTAGGGTCAGAGACCATTTCAGTCACAGCTGAGGAAGATGAAATTTCCATTCTACTTGGTGCCTTGTCCAGGGAGCACACTAACTCTTGGGAAAGCGTGTTGAGTGAGAAGAGGCTGAGCCTGGCCCACTAGAAACCCGTGGTTATGGCGAGTGAGCCAACGTGACCAGCGGAGGCAAGAGCCGCAGAGGGACTCATGACGGGCTATACCATGTTGCGGAATGGGGGCGCGGGGAACGGAGGTCAAACCTGCATGCTGCGCTGGTCCAACCGCATTCGGCTCACGTGGCTCAGCTTCACGCTGTTCATCATCCTTGTGTTCTTTCCTCTCATCGCTCACTATTATCTCACCACCCTCGACGAGGCAGACGAGGCGGGCAAGCGCATCTTCGGCCCGCGGGCCGGCAGCGAACTCTGCGAGGTGAAGCACGTGTTGGACCTGTGCCGCATCCGCGAGTCCGTGAGCGAGGAGCTCCTGCAGCTGGAAGCCAAGCGGCAGGAGCTGAACAGTGAAATCGCCAAGCTGAACCTGAAGATTGAGGCCTGCAAGAAGAGCATCGAGAATGCCAAGCAGGACCTGCTTCAGCTCAAGAACGTCATCAGCCAGACAGAGCATTCCTACAAGGAGCTGATGGCGCAGAACCAGCCCAAGCTCTCCCTGCCTATCCGCCTGCTCCCGGAGAAGGACGATGCCGGCCTCCCGCCCCCCAAGGCCCAGCGGGGCTGCCGGCTGCACAATTGCTTCGATTATTCCCGGTGCCCTCTGACCTCTGGTTTCCCCGTCTATGTTTATGACAGTGACCAGTTCGCCTTTGGCAGCTACCTGGATCCCTTGGTCAAGCAGGCTTTCCAGGCCACGGCCCGAGCCAACGTTTATGTCACCGACAATGCAGACATAGCCTGCCTTTATGTGATCCTAGTAGGGGAGATGCAGGAGCCCGCCGTGCTGCGGCCCGCCGACCTGGAGAAGCAGCTGTTGTCCCTCCCGCACTGGCGGACGGACGGCCACAACCACGTCATCATCAGCCTGTCTCGGAAGTCGGACACCCAGAACTTACTGTACAACGTCAGCACCGGCCGGGCCATGGTGGCCCAGTCCACCTTCTATGCGGCCCAGTACCGGCCTGGCTTTGACTTGGTGGTGTCGCCCCTAGTCCACGCCATGTCGGAGCCCAACTTCATGGAAATCCCACCACAGGTGCCGGTGAAGCGGAAATACCTCTTCACCTTCCAGGGCGAGAAGATAGAGTCGCTGAGATCCAGCCTTCAGGAGGCCCGCTCCTTTGAGGAGGAGATGGAGGGGGACCCCCCGGCCGACTACGACGATCGGATCATCGCCACCCTCAAGGCCGTCCAAGACAGCAAGCTCGATCAGGTCCTGGTGGAATTCACCTGTAAGAGCCAGCCGAGAGCCAGCCTGCCGACTGAGTGGGCGCTGTGCGGCGAGCGGGAGGACCGCCTGGAGCTCCTGAAGCTCTCCACCTTTGCCCTCATCATCACGCCGGGGGACCCGCGCCTGCTTGTGTCCTCAGGGTGTGCTACCCGGCTCTTCGAGGCCCTGGAGGTCGGGGCTGTCCCGGTGGTGCTGGGGGAGCACGTGCAGCTCCCCTACCAGGATGTGCTGCAGTGGAGCGAGGCGGCGCTGGTGGTGCCCAAGCCGCGGGTCACTGAGGTCCACTTCCTGCTGCGGAGCCTCTCGGACAGCGACCTGCTGGCCATGCGGCGCCAGGGCCGCTTCCTCTGGGAGACCTACTTCTCCACCACGGACAGTATCTTCAGCACCGTGCTGGCCGTGATCCGGACGCGCATCCAGATCCCAGCGGCTCCCATCCGGGAGGAGGCCGCGGCCGAGATCCCGCACCGCTCGGGCAAGGCGGCCGGCACCGACCCCAACATGGCGGACACCGGGGACCTGGACCTGGGCCCGGTGGAGACCGAGCCGCCCTACGCCTCGCCCAAGTACCTCCGCAACTTCACCCTCACCGTCACCGACCTCTACCGCAGCTGGAACTCCGCCCCGGGGCCTTTCCATCTCTTCCCCCACACGCCCTTTGACCCCGTGCTGCCCTCGGAGGCCAAGTTCCTGGGCTCAGGGACCGGATTCCGGCCTATTGGTGGCGGGGCCGGGGGCTCCGGCAAGGAGTTTCAGGCTGCGCTGGGCGGCAACGTCCCTCGGGAGCAGTTCACGGTGGTAATGTTGACTTACGAGCGGGAGGAGGTGCTCATGAACTCCTTAGAGAGGCTGAACGGCCTCCCTTACCTGAACAAGGTCGTGGTGGTGTGGAATTCTCCCAAGCTGCCGTCAGAGGACCTGGTGTGGCCTGACATTGGGGTCCCCATCATGGTGGTTCGTACTGAGAAGAACAGTCTGAACAACCGATTCCTGCCGTGGAATGAAATCGAGACAGAGGCCATCCTGTCTATTGATGATGACGCTCACCTCCGCCATGATGAAATCATGTTTGGGTTTCGGGTGTGGAGAGAAGCACGGGACCGCATTGTGGGTTTCCCTGGCCGTTACCATGCGTGGGACATCCCTCATCAGTCCTGGCTGTACAACTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACAGGTGCTGCCTTCTTCCACAAGTATTATGCCTACCTGTATTCTTACGTGATGCCCCAGGCCATCCGAGATATGGTGGATGAATACATCAACTGTGAGGACATCGCCATGAACTTCCTCGTCTCCCACATCACTCGGAAACCCCCCATCAAGGTGACCTCACGGTGGACTTTCCGATGCCCGGGCTGCCCTCAGGCTCTGTCACACGACGATTCCCACTTCCACGAGCGGCACAAGTGTATCAACTTCTTTGTCAAGGTGTACGGCTACATGCCCCTGCTGTACACGCAGTTCCGCGTGGACTCTGTGCTCTTCAAGACCCGCCTGCCCCACGACAAGACCAAGTGCTTCAAGTTCATCTAGGGGCCTTGCACGGCAGGGCGAGGACGAGCAGAGCGGGGCAGGCGGCTCGGGGGCCCTGGACACTGAAGGGCCTCAGGAACGCCCACCATGGTCGGGCCAGGCCCTCTGCTGGGAGAGGCGCAGGGGGGCGGGAGGGGCGGGCTGCCTTGCTCCTGAAGTGGGCGGCACCGGGCCCGGAAGCCTGGTCCCAGGCCACCAGGGCTCCCTAAACAGGGCACTGACGATAGCTTACACTGAGGACCATGGGGACTCTGGGGAGTCACTCACACAGCTCACGAGCCCAGCACAGCTGGCTTGTGGTTTTTTAATTCACTAACAACTATTATTATTATTTAAAGAGTTTCAGATTTGCCATTCAAGGTTTATTTATATATATGTGTGTGTATATATACACATATGTGTGTGTGTGTATATGTGGGTGTATATGGATATATGCACACACACTCACAGACATATACATATGTATGTATTCGAGGGGGAGCTTGGCGTTTCTGCCCATCTCACAAAGTGAGGGTCCCACCGTGGTGGTCTGTATTTTGGTGGAGAAGGATCCTGGCCTTCCTGTATCTGGCTCGTCCTTAAAGATGGTCTCTGTCCTCCCCAGGGGCCCCTGTGTGCAGAAACAAGAAAGGGCTGGCGTGGCCCCGGGGGGGTCTTGCCTGAGTTCAGACCTGTGGGTTGGCTCCTTCCCCGCTTCCTGTTGCCAGCAGCGCTCTGTGGCTCGAGTTGTCCTGCACTCGAGTTCTCGGTGGGATGGAGGGCCTGTGTATTTGGGGCAGCTGAGTTTCCCTGCCTGGGACAGGTGGGTCGAGGACTCCCTGCTGGCTGTGCTGTCTGTGTACTTGACCTGGCTCTCCTTTCCCCGCTGTCTGAGAGTGAAGACAGGAAGGACCGAGACCTGCAGACAGACCCCCAAATGGTTCATTTTGTTTGACCCTCCTTTTAAGGACCTGTTGTGCTTTGGCTGCAGACTTTCCTGAAGGTTCTCTCACGTACAGAGCAGATGCCTGGCGGCTACACTTCAGGGGGGTCTGAGTGGTTGGTTGCAGGTCGGCCGACTCTCTCCGGCTCAGAGCAAGTGAGCACAGCACCCTTTGATCCCCACCCGGCTGGCCGGGAGCCACAGCAAGGCACCTGCCTTGGGATGATACCTGGGTGAAATTCACCTTCCCCACCCCATCTGGACCCGCATCCTATAGTCCTAGATCCCTCAGGCCGGGTGGGTGTCAGGCCCTCCCCGGGGTTGGTTTGGTCTATGTCAGAATGATGGGAGGATAGGATTTGTTGGGTTAAGCTCAAATCCAGCCTGAAATTGAACAGGTGTTCATATCCCATATTACCACTTGCCCCTGTGGGTTTCAGTCTCTATTTTCCTGGGCTGAAATAGAAGGAAGGTTTTTTTTTCTGGAGGTGGCAGCAGTAGGGGAACTGAAGAGAGTGGTGTCACTGGCGTTGGCTGGGATGTAGCACGTGACCGCTGCCGCTATTTCTGGACACCCCGTTCCTCTGGTGAGGCTGAGTCGAGGAGGTTCCCCTCAGTGACTGAACACAAGCTCGGGCCTGTCCTGGGCACGCACATGCCTTAAGCCAGCTCCCTCCTCCCCGGACCTCCACCTCCCATGCACCTATTTCCAGGGGGCACATCCGTCTCTGACCTGCCTGCCCACCAGAGGGTCCTCTTCAGGTGTCACCTGAAGCCAGCTCTGTCCTGGAGGGAGCACCCCCTGGAGGGCTGAGGGACCTGCCCTGTTTGGGGGGCAGGACCGGGCTGTGTCTTCCTGACGTCCCTGCTGGCATCTCCCTGTGTCTCCCCTGCTGAGGCTGCTTCCTAGGAAATGGGCTCTGCTGCTCGGCAGCCCAGGGAAGGGGTCCAGACCCCCGCCTCCTGACTTTCTAATTACTCCTCCTTTGACCCTGGACTTGATTCTTTTTAGCAGTAGCCTTCTTCCCTTTGGGAAGCCAAAGAGTGTGTTGTTTTGAGCTATAAATGTGGCTGCTATTTTTATCTTGTCTCTTTTAATGTGAGGAACCCCTGGACTGCCTCTGAGCACGGGGTCCCTGGTGAGAAAGTAGCCGTGTCAGGACCCGCCGAGGTGGAGCCAGGGCACGGGGTCCTGAGTGTCAGGGACAGATCCGGAGCAGCTGGTGCTCTGAGGTGGTGGGTGACATCACAGGGCACTGAAGGGTGGTGGGGGGAGGTGATGTTGGAGCAGACGATGGGGCTCTGTTGGACCTGAGTGTGACTCTGACTTGGAGGAGCCGGGACTGCAGGCTCTGGTGGACACGGGCCGCGTCTGTAAAGGACACTCCTCACGGCGAGAGGCGGGGGCAGGGCTCTCGGGGGCCTGGTCCGGTCTCCCAGAGAACAGCCATCACATTTTGCAAGATGGGTTAGGGGGCCGCCCAGATCCAGGCTTCCAGTGCCTTTGACGCCTGTTGTTTACCTTGGGGAGTCCAGAGTCGTCTGCGCCACCTGGCTGACTCCTGGAGCCTGGCACAGCCCTGCAGACACACGAGACGTCGTCAGCTGTTCCGTGAACGCCCACTGCCGTCTGCGCTCCCAGAGCCCAGCGCATCCTTGCTCCCCAGTGGGCCAGTCTGCTCTCTCCCGAGAGACACCCACCTGAGGGGAGGCACCCACCAGACTTGCGCCGTGGGCCTCCGCCTGTGTGCGCCGCTCCAGCAGGGCCCGGGCACCGTGCCCCAAGGAAGAGTCCCTCCGGAGCGGCCTGCCTGTGTGAATGTGGGCGCTCCTCTCTGCAGCGCTTGTGTTCTGGAGGGGCAAGCTCTACTAATACCCACGCCATGTCCATCCACCCCACCCCTTTTCCAGTCATGAGCACAATGGTCTTACGTTGGGTTTTTGTAAAAAAAATAAAAAATAGAAAATGGAGACTACAAGC EMBV3_28379 TAAATCATACAAAAGAGTATTAAGGTAAAACACAGACTAAATGAAGGAATTATTATATAG Gene BVV0102_407960 - 1 EMBV3_27341 GK000019.2:19952303-20014788 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15713 ATGGTATTAGAAGACAAGAGAATTTTGAAGGTAGCAGATGTCCTTCAATTTTCCGTGGAA Variant GeneID:617602|EXD1:XM_002690822:71_cdna 913^993 1 EMBV3_13317 GeneID:617602 10 GENE EXD1 EXDL1 exonuclease 3'-5' domain containing 1 EMBV3_19520 GGTTCCATCTACCAGTGACCCCAAGAAAAATAGTTTTATCTCATCCCAGCTTGGTGGCAC Gene BVV0101_011604 + 0 NULL GK000028.2:2691286-2710499 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206254 TCONS_00130704 TCONS_00087337 TCONS_00009370 TCONS_00041591 TCONS_00058128 TCONS_00173130 TCONS_00060246 TCONS_00060247 TCONS_00148919 TCONS_00122072 TCONS_00206255 10 XLOC_124865 XLOC_079412 XLOC_052448 XLOC_004926 XLOC_025397 XLOC_035925 XLOC_104301 XLOC_036632 XLOC_090799 XLOC_073628 Coding TCONS_00058128 XLOC_035925 Coding Coding - 14:82094015-82099878 - TSS43805 5863 6 TCONS_00058128_1 65 0.844618795838308 1 0 0 1.42822748366776e-07 0 2.26982300237977e-07 1.64909315741234e-06 5.01643347238605e-07 3.72998741831484e-07 2.45759859409671e-06 3.47966094467518e-06 0.000107045530380264 4.7061861663878e-05 3.38377227786038e-05 1.62262430322906e-05 9.22541666462247e-05 3.73875052193381e-05 0.0023618740805083 0.00205303858559483 0.00606208114821067 5.28149909105646e-07 2.2487391664253e-06 7.68131334997797e-08 0.00162059026821142 0.00170753933579914 0.00208593180334666 1.18172881090719e-06 1.1807456501134e-06 8.03475725376602e-07 0.000480588386363405 0.000383517105637161 0.000551319458979418 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 1058 85.03 0.154187276138496 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 1e-09 71.6 70.59 0.0283131502643698 0 coding 1 1 1 1 -0.595416926795943 0.174418025970049 -0.0383345061947562 0.593236167095668 CAGCCCCGGTGGATCCAGGGAATTCGAAGCGGGGACGGCGTCGGCGAGGATCAGGAAACAATTGCTTAATTAAACGTTAATTAAGGATATAAAGAGTAATAGAATGAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTAAGAGAAAGAACGACATGGTGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAGTAGTTTTTATACCTTAAGTTATGCATAGAGGATAATGGGGGAAGGGGTAGAGTCATGCAGCAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGTTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTTTTTCTCTAAAGGTGATTATTCTCAAGTCAGGCGCCAGCCTCCAAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAACTATATTAATCAATACACTGCCAGGGACACAGCAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTTTAACTGCTCAAAGGAATCTGTATTTAGACAGTTTAGAACATCTCATGCCTCTCACAGTTTGGAGGCTCTGAGCAATCACATGTGGCCGGAAAAAACCTATTCAGGCAGGCTAGAGGACTTCCAAGGGAGTTTGTAGGTTGAAACACTGTCACACCCAGGAATTATTAACTGGAGCTATAAGCTAACTCTTTTTTCAGAGAGGTAGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAAAGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATTGCTCGAGAATTTCCAGGGAGACTCCTGAGGCTTGATCCCGCCTTTGCGTATGCCAAGCCTCCTTCCTCATGACCTTTGCCAGAGGCGGAGCTCGCTCCCCGCATCTCCCCCTTTTTTATTTCTTAAAACAGCCAGAGGCAGCTCAGTCGCGAGCTTTTGAATGCTCTGCCGAAGAATCCTGACAATACAAGGAAGAATGATTATGAGAAGCAAAATTAGAACTAAAGATATTAGACAGAATGCTTTTTCCAGAAGTAAAGTTAGAGAAGGTGTGAAATAAGTCATTAGCTGCTCCAGCGGTGGTAAAATCCAGTTGACAGTGTTCCAGGGTCTGTATTTGATTATGAAATTTCCCTAAGTCCAGGCCAATGTCAGAGCTGTTGCAAACACCTGAGATATGTTTTTTGATTTTTTCCCATTCATAATCTGTCTCGTTTACCTTTAAAGATGTCACGCATATCCACCGGTAATCAGCGTGGCAAGACAGAGCCATTTTCACTTTTAAAGCCTGTAACTCAGTCCCAATATGCATTATTGCCTCTTTTAAGGTGTCTACTCTCATCTCTAATTTCTTATCTATAGCTTCCTGTGTTGCTAGAGTTAAAGAAACACTTTTAGACGTGGTATCAACATATTGGGCAGTATGCACTTGTTGAGTCAATGATATTGCTGCCGCAGTAACAGAACTAATTGCTGCTATTAAAGCTGATATTCCTAAAATAAGTAAAGCCCACAAATCGTCGCGATCACATTAAATCTTGTAGTTGTTGTAACACAGCAAGACTATAGTTATATCAATAAGTGGTTACATCGTAAGATATGGTGGACATTGTAACACTACCAAAGAGCAAACATTATATTGAGGGTTTAAACAAGATGAGAGCATGCATTGTTCACAAGTCACTACATTGGGTCCACCAGTGAAAGTCACATGTACATTAAGTTTTCCAGAATCATTGGTAAAGAGAAAAACATAAGGAAAGGGTAGACAAGCCAAAACAGAATAAAGTAGAATTATTTTCTGGTTGGAGTTCGCACTGCAGCAGCCCCGTCAGTCTTGCCGGGATCTCGATGTTTATCTTGCCTCCCCTTCCGGCAGGCTCCTCTTTTGTGATCGAAGCAATGGGGAACTGGATGTCTGGGGGTCTGCAACATGGCGAATCAACCTGTCTTGGATCTAAATTGGAGAATCTGCATCCTGTGGAAAAATACAAGCACATCCTCGACCGCTAGTTAATAAGGGGTCAGGACCCTTCCATTGTCCTGAGAGAAGGTCCTTCCATTTGACTAACGGTTTTGCATTTAATTGCTCCAGGCACCAATGACAAAGCATTGCAGTAGTTCCAGCCAGATCAGTATTTAGAATATTTGTTACGAAAAGAGCAAATATTTATTACGAAAAGAGCATGTTGCAAGATTTGATGGGGACAGCTATACTTAAACTCCCCTTCTTTTAGTTTTTGAATTTGGATTTTTAATGTTTGATGTGCTCTTTCCACAATGGCCTGTCCCTGGGGATTATAAGGGATGTCTGTATTATGTTTAATTTGAAACTTTATACAAAATTCCTGAAAAGACTTAGAAGTATAAGCAGGAGCATTGTCAGTTTTCAAAGCTTTTGGTAGGCCCAAATATGAAAAACAAGTAAAGAGATGTTGTATTACATCTTTAATTGCTTCCCCTGTATGAGCAGTTGCAATAATAACATGAGAAAAGGTGTCTACAGTTAAAGAACAAAGGACAGTTTTCCAAATGAAGAGACATGAGTTACATCCATTTGCCAGAGTACGTTAGTTTTGAGACCGCGAGTATTAACTCCCATAGGTAGACTATTATAAACAGTGGGGCAATATAAGCAAGAACACACAATCTCTCGAGCAGCCTCTCTGGGAATTTGGAATTGATATCTTAAGGCAGTAGCATATTGACGATAAAGTAAGTGAGAGGCTCTGGCCTCCTCAATCACAGTAGCCACTGTATTTCAGGTTAACAAGTCAGCCAAATCATTAAAGGCATTTTAAGGGCCGGGCAATCCAGAATGAGCCCGAATGTGTCCAATGAAAAATATTTTATTTCTTTTCCAAATTTGTTGCTGTAATTTAGTTAACAAATGAAATATGGTAGTTTTATTTTCAGGCAAAACCGCAGTTTCAATGTGTGGAAACAACCTGACAATATACTGAGAATCAGAATAAAGGTTAAATTCCTCATCTGCAAACATAGCAAAAGCCTCTATGACTGCTGTTATTTCAGCTCTTTGAGATGAAGTTTCCCGTGTTTCTAAAACCTTTTGGTGATTTTTAGTAACTATGGAGGCTTTACCATTTGCTGACCCATCAGTAAAAACTATTTGAGCATTTAGAATAGGAGATTGTTTACATCTGACAGGAAAAATAACTGGATGTCTCGATATAAAATTCAGCAAAACATGTGAAGGTAAATGATGCAAAATTTTGACCAAAATGGTTTCCTATAGCAATCTGCCAATTTTTATCAAACATTAGAAGAGCAACAAGTTGTTCCTTAATGTATGGAATTACAATTTCTGATGGCTCTTTACCAAATAATCCAATGTTCCGCTTTTTTCCTTTAATATCAAAGTAGCTATCAATCCTGGATAAGAAGCCACTACTTTTTTAGTTTGAGCGGGAAGATGGACCCACTCTAGGGGGGCCATTTTGCCAATTTTTTGTCTGGTTACCCCAGTTACACCTATGGGGGTTTTATGGCAAAGGAATTATCAAGCAGTTGTCAATTTAATTTTTAAAATTTACATTTTAACAATATAAATTTAGAGATATGTTAATTTAGGTCTAATGTTTAGTTTAGGTCTCCGTATAAATTTAAATAATAAATGTATAACCTCCTTATCTCATTTTGATATACAGATATACCTAAATGCAAAATGTATTTATATATGGCAACAAGTATAGACTTATTGACATAATATACTTGAATTAATCTTTATAATTAATGTTAATTAATATATATTACAGCAATACAACACGTAGACAGCTAATACCAACCAACACAAACCAATGTACTGTAATAATACATGTCACACATATATAATTATACAGTATACAGGACATATATCATCACAGCACATCAATCTATACCAATTAATATCAGCCACACACATTATATTACTGCAATATACATTTAATTATACAGTATATATATAATATGCATATATAGTATACATACTAATTTATATACAAATTAATTAAGTATAGATCTATAAATAGAATTAGGTATACCTTTATTATATTTTATTTATACCCATATCTAATTAGGCAAACTGTAATTAGGCAAATATATTTATATTATGTATTTATAACAATATATAAAGTATTGTTAATTGTACCTCCTGTTGATAACTAAGAAATTGAGAAAACCCTTCTCTGAGTATCTCCTATTTGAGACAGCACGTCCCTCCCCCACAGGGTAAAGTGGAGCATAGGAACTACATACGGTTGGAAAGTTCCACAGGTATCCTCAAACTGCCAATCTAACATTTTTGAACTTTTAACTACTGTGGGGGCTTGAGGGCAAATGAAACAAAATTTGACCCCTGAAATCTATCAGGGCAACTTGCCAATTATCACTATTTCATAAAAGACTTGCAGTTGATCCTTATTGAGTGAAATTATTATATTTGCTACTTATTTTCTAAAAAGTTCCACACTTCTTTTTTCCTCCTTTTATAATTAATTGTGCCACCAAGCTGGATAAAGATAAAACTATTTTTCTTGGGATCACTGGTAGATGGAACCAATGGGCCTTTTTGTCACAATCACCCTGTAGGTGTATGTTTTATGGCAAGAATAATTTAATCTTATCTTTTGGTAGTATTAATCCTAATTAACTGATCATTTAAAGTCTCATACACTTCAACAAGAGCTAACTCTGTCTCATTAGTTAACTTTCTCTTAGAACTGGAATTAGGATCAATTTTTAAGCAATCAAATAAAGGCTTTAAATCTGCAGTAGTCAGTTTTAAATGAGGGCGTATCCAATTAATGTCTCCTAATAATTTTTGGAAATCATTTAAAGTTAGTAAACAATCTCTCCGCAGCTTCAAAGGGGCATCATCAGTTTTTAAAACTTTTGGCAGACCTAAATATGAGAAGCAAGTAAAGAGGTGTTGCACAACATGTTTATAAGCTTCTCCAGTTATCGTTTTGTAAACGATTTTGTAAAATCTGGTCTATAGCCTTTTAGATGACAAGCAACCATCTAATCTTTGCTTGAATACTTCCAGCAACGGGGAACTCACTATTCTTCAAGGTTTTAAACTCTCCCTCACCTTTTTCTCTACAGCATTCCCACCCCGCATACCAGTTTCTCTAATCTCAACTCATTTTCAGTAATATGTGTTGGCCAGGAGCTGGGTCAGTCTTTCCCAGCAATGTTAAGAGACGTCTGTTCCTGTGTCTAATAGCCCTGACATTTTATTTTCTTGAATTAAAAGATCTTTTAAAGGCCTTGGAGCTGTAATTTCCTGCACCCAAAAGGCTGGATCACTAGATCTAAACGCTCTGTGGCTCTTAGCTTGAGAAGTCAAGTTTTTTCCTGCCTGATAAGGTAAAAGAAAAACTGTGTTATTCTTTGACCTTTATTAATTTGCACAGTTTTGGTAAGCGGCGAGATCAAAACTATAATTTCTCCAATATAATCAGAATCTACCACACCATATACCACCGAAATTTCTTGAAAAGAAAGCGAGCTACACCCTAGCACAAGTCCTACAATGCCCTCAGGCAGGGGGCCAGCCACTCCCATTGGAATCGGAGCAACCGGCATATCAGGGGTTAATATTGTTGCTAAATCCCTTTACAGTCCGCTTTTTTCTTAGCCTGGGTGAGACCCCCCTGAGGGG TCONS_00052399 . 5' 1039854 TCONS_00052399 . 5' 1039854 EMBV3_21165 GCAGATGTGCTTGGCCTCTTGGTCTCATCAAATTCTTCTAAAACCGGTGAGGCAGGTATC Gene BVV0102_188677 + 0 NULL GK000001.2:70382438-70504976 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03751 AAAGAGTACCTAGAGCTGGAGAAGTGCCTCTCGCGTATGGAGGACGAGAATAATCGGCTG Gene GeneID:539696|HEXIM1:NM_001076181:272_cdna Constitutive 0 NULL GeneID:539696 19 GENE HEXIM1 MGC143004 hexamethylene bis-acetamide inducible 1 EMBV3_22512 TGACCCTGCACCATATTTGCTAAGTGAGGAGTGGGTTTGGGACCTTACTGCGGTGTGTGT Gene BVT0102_024282 + 0 NULL GK000017.2:72195914-72198071 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076276 TCONS_00076278 TCONS_00076277 1 XLOC_046770 Coding TCONS_00076277 XLOC_046770 Coding Coding LIMK2 17:72175052-72197621 j TSS57280 4136 1 TCONS_00076277_4 617 15 0.817396313364055 0.000515979723189413 0.000120641273370848 0.000367966968483243 0.000165533704679126 0.000188739135427636 0.000179234402889366 0.000381615354781393 7.80748979353678e-05 0.000602622719223273 0.000164781397916046 2.66181165841751e-05 0.000275206699616464 1.64633852508283e-05 0.000168696036794689 0.000107532493601827 0.00313317855533666 1.31016684990117e-09 0.00155914118513061 4.2094289044665e-05 0.000911665282241669 0.000217411899676838 0.000276016989201306 0.00107757631515736 0.000331554022843056 0.000397320353488467 4.09381722538173e-05 3.35872892586157e-05 1.15935321615225e-24 6.96866204414485e-05 1.9037546740165e-13 XM_005218146.1 LIMK2 PREDICTED: Bos taurus LIM domain kinase 2 (LIMK2), transcript 0.0 6228 100.00 0.834622823984526 NM_016733.2 LIMK2 Homo sapiens LIM domain kinase 2 (LIMK2), transcript variant 2b, 0.0 3095 86.47 0.629110251450677 TCONS_00076277_4 sp|Q32L23|LIMK2_BOVIN LIMK2_BOVIN LIM domain kinase 2; 0.0 1249 99.83 0.972447325769854 4 coding 1 1 0 0 0.0390563147126209 0.760953138341963 -0.00852009476321472 0.858099739018688 GGCGAGTCACCGGCCCCTGCCTGAGAATGCCTGAGTGCGTGTAGCCTCTGCAGAGAGGTGCTTCTCCTGAGTCCCGAGGGGCCGCCCAGCCTCGGAGAACCGGGGAGCAGCGTCCCAGCCATGAGCTCCTGCGGGACTTCGCTGAGGGGCAAGGGGCTCAGAACGCTCACGCCCCTCCGGCCGCCCCGGAGGGAGAGGTGAGCTGGGCAGCCAGCGCTGCCAGAGCCCCAGGCCTGTCATGGTGGCCGCCCGCAGGCCGGAGGCCCTCCCCGACGGGTTTGCAGCTGAGCTTGTGTCTTGTGTGTCTGGCGTGGGAAGAAGATGGGGAGTTACTTGTCCGTCCAGGCTTACTTCACCTCCAGAGACCCCTTCCGGTGTTCTGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTGTACTGCCACAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGCCACGGATGCTCTCTGTTGATGACGGGGCCCGTCATGGTGGCCGGGGAGTTCAAGTACCACCCAGAGTGCTTCGCCTGTATGAGCTGCAAGGTGATCATCGAGGATGGGGACGCATACGCCCTGGTGCAGCACGCCACCCTCTACTGTGGGAAGTGCCACAACGAGGTGGTACTGGCACCCATGTTTGAGAGGCTGTCCACGGAATCCGTCCAGGACCAGCTGCCCTACTCCGTCACACACATCTCCATGCCAGCCACCACCGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCAAACTACGCCACCACCGTGCAAGTGAGAGAGGTCAACCGGATGCACATCAGTCCTAACAACCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGGCCCCCGTGCGCACGCTCCGCGTGGAGGAGGTGGAGGACGCCATTAGCCAGACGACCCAGACACTGCAGCTCCTGATTGAACACGACCCCGTCTCCCAGCGCCTGGACCAGCTGCAGCTGGATGCACGGCTCTCTCCCTGCGCGCAGAATGACAGACACGCGCACACCCTCAGCCCCCTGGACACCAAGGAGAACCTGGAGGGGACACTGAGGAGACGCTCCCTGAGACGCAGTAACAGCATCTCCAAGTCCCCCGGCCCCAGCTCCCCCAAGGAGCCGCTCCTGCTCAGCCGTGACATCAGCCGCTCAGAGTCCCTGCGCTGCTCCAGTAGCTGCTCACAGCAGATCTTCCGGCCCTGTGACCTGATCCACGGCGAGGTCCTGGGGAAGGGCTTCTTCGGGCAGGCCATCAAGGTGACGCACAAAGCCACGGGCAAAGTGATGGTCATGAAGGAGCTGATCCGGTGTGATGAGGAGACACAGAAGACTTTTCTAACTGAGGTGAAGGTGATGCGCAGCCTGGACCACCCCAACGTGCTCAAGTTCATCGGCGTACTGTACAAGGATAAGAAGCTGAACCTGCTGACGGAGTACATCGAAGGGGGCACGCTGAAGGACTTCCTGCGCAACGTGGACCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGCATCGCCTCTGGAATGGCCTATTTGCATTCCATGTGTATCATCCACCGGGATCTGAACTCGCACAACTGCCTCATCAAGCTGGACAAGACCGTGGTGGTGGCTGACTTCGGGCTGTCACGGCTCATAGTCGAGGAGAGAAAGAAGCCCCCCGTGGAAAAGGCCACCACCAAGAAGCGCACCTTGCGCAAGAGCGACCGCAAGAAGCGCTACACGGTGGTGGGGAACCCCTACTGGATGGCCCCGGAGATGCTGAACGGAAAGAGCTACGACGAGACAGTGGATGTCTTCTCTTTTGGGATTGTCCTCTGCGAGATAATCGGGCAGGTGTATGCAGATCCTGACTGCCTGCCCCGAACACTGGACTTCGGCCTCAACGTGAAGCTCTTCTGGGAGAAGTTTGTCCCTGAAGAGTGTCCCCCAGCCTTCTTCCCCCTGGCAGCCATCTGCTGCAGACTGGAGCCTGAGAGCAGACCGGCATTCTCCAAACTGGAGGACTTCTTTGAGGCACTGTCCCTGTACCTGGGGGAGCTGGGCATCCCACTGCCCACAGAGCTGGAGGACCTGGACCACACCGTGAGCATGGAGTACGGCCTGATCCGGAACCCGCCTCCCTAGCCCTGGCCCAACCCCCTTCTGGGGGCATCCCCCAGCCAGCACTGCCCCCTCTGCACCCATCCCTGCTGCGGGCAGGGCCGGCCAGGCCTCCTGGGGATCGGCAGCTCATTCAGAAGCAGGACTGGCCATCCTCCTACGTCCCCGGAGGCAAGCGGGCACAGCACCAGGGAAACGTCCCCACAGGTCCTGGAGCCCGGTTACTGTCTGTAAATCCCACACTCGCCTGGAAGCTGTGAAGAAAACAAACAAACCCTGGTCCCTGAGCCAGGAGGAGTCTGTTACTCGTGACCACTCGGGAGTGCCCTGGCAGTGGATTCCCAGAGGCCCTTGCTGACACTGACCAGCGCACCCTGGACCTGCTGGGCAGGCTCCCGGGTGCACCGCCGGCGGGCCCTGACGCCTCTGGTTCGGCCGGTGCAGGAGGACTTCTTGTGGAGTGTGGCAGAGAGTGCGGCTGTCCGAGGACCGGAAGCGACCGCGGTGCTCCCCGGCCCTGGCGCGTCCCGCCCTCCCCTGGGCAGCATTGAGGGAGTGGGCTGTAAAGCGTCTCCTGGTCGGTTTGTGGTGGGTCCGGCCAGGAGTCAGGAGCAGGGCTGGTTTCTGTTCGCCTCCTGGGCCCCGGGGCCCCATAGGCTCGAGGCGGAGCCTCCACTTGTGTTCTCACACTGAGCTCCGGACTGGCGGGGAGCTCGTGGGCGCGTCCCTTCTGCCAGCGACAAGCAGTCACCCGCAAGCGCAGGTGGCGGCCAGGGTGAAGGAGAGGCCCTGCCCTCTCGGAAGCCCTGGTGTCCTGGCTGCTGTCCTTTGCACGCTCACGTGCGCTTCATCCAGGAGCCCAGGCTTGTACGGGGCGGGCTCTGGAGGACACTGGTTAGTGGAGGCCCAGCATGTGGGGTGTGAGGTGACCCTGCACCATATTTGCTAAGTGAGGAGTGGGTTTGGGACCTTACTGCGGTGTGTGTGGTTGTGCTGGGGGCGGGGGCGGCTGGGTGACGCGGGAGAAGGCGGTTGCCGTTCAGACTGTCTTGGTGTTGTACCTGTGGGGGTGATGTGTGAAACGCTGTGCACAGACAGACCTGATGAGCTGAGGCACTGGGTGTTGCCTCTGGCCAGTCTCCTTGCTGTTGACGCCCTGCTCAGGTGTGGAGTGTGCGAGCCCTCGCCCTGGGCTCCCGGCATCGTGCAGCTGGTGCTGCCTCGGTGGTCCCCGCAGGAGTGGGGGTGGTGGGCCCAAATCAGGCCGTGGAGCAGACCAAATAAATTAAGCAGTTAACATGACTGATGGTGCGGAGAGTGAGAACGTGACTTGCGGCCTGGTTCAGGGACACGCACATGGAGGCTGCAGTGGCCACTTTGAGGCCCCGCCCATATGACCCCACAGCAGGGGTTCGAGTGCTCTGACCCCACCTCCTTACACAGACACCCGCCTGCTCCAGGGGACGTGTGCAACCCGGAGGCAGCCAGGCCTCGGGGCAGGTGACCTGCCGCCTCCCAGCCACGCCATCCCCTCAGGCCCACCAAGGCCCGCCCTCCGACATCCGTGCACTCCCACTGCCCAGCCGTCCCGGAGTCCTCTCTGCCGGGCTGGGTGCCACCTTAACAGAGGGAGGAAGTGTGTGCTCGTCACCCCTGCCCCTGGTGTCTCCTTCCAAGAGCTCAAGGGGAGACCTGCTTCTTGCGTCCACACATGGGGCCTGTGGGGTGCCAGCTGGGCCAGGTGATGCGATCTGGCTCGCGGGATCCTGGGCACAGCACACATCCACAGACCCAAAGGTGCTTTCTCCCAAAGCTGGCTGGAGTCGGGGCCAAGATCTAGTTCCTGGAAAAACACGTGCTAGGGTGCCTGCCCCTTGCTGGCAGCAGTATAGAATGGTGACTGGATACAGGCAGAGGTTGCCCTGGGTGTTCCTAGAGGCTAAGAACCTGTTGTGAAATCCTTGCTAAAAAGCCCCCAAAAGACT EMBV3_22635 TGCTTCAAAAGTGGTAGTAGAGGGAGGGGTTTCCATCCGTATACGAGTGGTCTCTTCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41684 AACAAGAAAACAGAAATGGACCATCAAATGATTCATGGTGTTGCTATCTAAAGTTGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02907 TTCTACCGCCAGAAGCGGGACTGTAAGGCTTCGGTGAACAAAGAGAATGCCAAGGGCCAG Gene GeneID:787384|GRRP1:NM_001099203:314_cdna Constitutive 0 NULL GeneID:787384 2 GENE GRRP1 MGC155144 glycine/arginine rich protein 1 EMBV3_43538 AAGTCCGAGCAGCAGCGGGGGCGTCATGGAGCAGCACTTGGTTCAACACGACAGGGATAT Gene GeneID:539578|HCN3:XM_002685977:298_cdna Constitutive 0 NULL GeneID:539578 3 GENE HCN3 NULL hyperpolarization activated cyclic nucleotide-gated potassium channel 3 EMBV3_06157 AAACTAACTTCCTGCTTGTCCCACTCTTGGGCACATGGAGACTTGGAATTCCCAGAGCCT Gene BVV0102_376718 - 1 EMBV3_19297 GK000019.2:51516090-51523264 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33147 AATCTGGAAAGCTTCACACGTTGGAGTCAGATGGAGAGACTGCCCGTTGTGTCCTGTCTG Gene GeneID:787343|LOC787343:XM_002689538:199_cdna Constitutive 0 NULL GeneID:787343 8 GENE LOC787343 NULL similar to Interferon alpha-2 EMBV3_33050 GAAGGTGTCAGACCATGAGGTCCTCGCAGGGTACACGGGCCATAAGAACAAGGAGTATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05277 TCAGCAGATTCGAGAAGGTCTGGAGAAAGCACAGAGGCTACTGAAACAGTCACAGAGACG Gene GeneID:286770|DNAJC3:NM_174756:38_cdna Constitutive 0 NULL GeneID:286770 12 GENE DNAJC3 NULL DnaJ (Hsp40) homolog, subfamily C, member 3 EMBV3_21394 GATCGTAGAGTCGTTGGATCATAAACTGGAAACACTGGTGGAGGCGCATGGGGGCGAGAA Gene GeneID:518180|LOC518180:XM_002694645:148_cdna Constitutive 0 NULL GeneID:518180 17 GENE LOC518180 NULL similar to MGC84382 protein EMBV3_40746 CCTCAGGATGACTGGAAGAAGCCCAAGGATGATGAAAACAATAACTCGTCTTCACAAAGC Gene GeneID:525262|FAR1:NM_001099032:143_cdna UTR3_Alt 2 NULL GeneID:525262 15 GENE FAR1 MGC139098 MLSTD2 fatty acyl CoA reductase 1 EMBV3_34567 GTCAACTATGAACAGTTCCTGCCACCCAAAGCCTTCATCCACGTCGAAGACTTCCAGAGC Gene GeneID:338077|FUT5:NM_176851:18_cdna Constitutive 0 NULL GeneID:338077 7 GENE FUT5 FUT FUT3 FUTB MGC128015 fucosyltransferase 5 (alpha (1,3) fucosyltransferase) EMBV3_43133 CAAGAAGGGCGAGTATAACGTGCAGGAGGCCGAGAGCTCAGGCGAGGCCGTGTGTCTGAA Gene GeneID:505158|ICAM5:NM_001113762:300_cdna Constitutive 0 NULL GeneID:505158 7 GENE ICAM5 NULL intercellular adhesion molecule 5, telencephalin EMBV3_06726 CAACGTACTCAGACGAAGCTACAGCAGCCCCAGGAAATATAAACAGAGTCCGCAAAGACC Gene BVV0102_103487 + 0 NULL GK000003.2:77573845-77948148 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31073 AAATGCCAACCGCTTCACCCGTTGGCAACCCCGGCAGTGTCACCTCAGATGCATCTAATT Gene GeneID:519770|PBX4:XM_002688534:130_cdna Constitutive 1 NULL GeneID:519770 7 GENE PBX4 NULL pre-B-cell leukemia homeobox 4 EMBV3_43389 GGGAATGAGAGAGTCATTTCCTAGGCAGGTTGATAAGGAGTCTAGGGGTCCCCAAAGAGA Gene BVV0101_059156 + 1 EMBV3_23567 GK000001.2:45091485-45281233 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061493 TCONS_00107436 TCONS_00166913 TCONS_00036105 TCONS_00055707 TCONS_00056144 TCONS_00174805 TCONS_00171428 TCONS_00174806 TCONS_00061496 TCONS_00061492 TCONS_00071091 TCONS_00036106 TCONS_00061494 TCONS_00123823 TCONS_00061495 TCONS_00174809 TCONS_00174808 TCONS_00000529 TCONS_00174807 11 XLOC_036985 XLOC_063346 XLOC_101749 XLOC_021081 XLOC_033515 XLOC_033947 XLOC_104695 XLOC_103815 XLOC_042864 XLOC_075375 XLOC_000141 Coding TCONS_00123823 XLOC_075375 NonCoding NonCoding - 21:34656367-34662647 - TSS92582 6280 3 TCONS_00123823_4 92 0.992675159235669 1 0 3.77134517527418e-05 4.21711484909763e-05 6.36514048010475e-05 3.23976139061837e-05 6.15331922129947e-05 3.61700959405924e-05 1.61526940260824e-05 6.0735715796653e-05 3.88954490514635e-05 0.00595356662766109 0.00300315911924533 0.00173409760772519 0.000118225667385741 0.000425361799399912 0.000169227460384902 0.0482497752055065 0.0251893156191683 0.0387135172272996 1.57274342601737e-05 1.68872656173388e-05 1.65937901894413e-05 0.0286143890436025 0.0366562465344312 0.0402979952275959 2.89694279046929e-05 2.21167479186835e-05 1.12648953241591e-05 0.0178434173707148 0.010300482077611 0.0272490970592757 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1490 91.55 0.167197452229299 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 3e-30 140 64.52 0.133917197452229 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 TTGTTGTTGAATCACACGAATACACCAGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTACTTCTGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGTAAAAACAAAACAACCAGAATTAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTACAAAGTGTTTGCACCAGTCCATTCTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCATGGGAAGCCTTTCACTGACGAAGAGGGGAGTGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAAGAGTGAGCCCAGGACAGGAGGACATTGTCTTGAGGATCCAACGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCATAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGGCTAATGAGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCGTTTTTCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTTCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGCCCCAATTACTCGTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGTCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCTTCTGTCTCAGCACAGAGCAAAATATCTACATATTGTAACACCACTGCTTCAGAGCTGTTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTGCCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCCTTAACTTCATGTTTCAGTGGATAGTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTCATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGATGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACACCTCTGGGGGCAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGAGCATTTTTCTCAGGCTATTTAAGAACGTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGACTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCTGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCATTCTCCCTCTTCCCTACTGATTCATTACCAAGCCATTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGATCATAAAGCAAAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCTGGTACGGGGGCAAAGGAAGAGGACAGGAGGGAGCTGAAGGTTTCACACCCAAATCTATACCCTTAGGACGTAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGTAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAGGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCGCCGTACTCGTCCCTCCAGGTTCTACCACCGGGATGGGGTGGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACCGCTGTAGGAAACATTCGTCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGACCACAATAAGACCGACGCAAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCTGGCATTACCAAAGAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTCCGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACGAATCCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATATCTGGTCGGTTCCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAATGCCCCGACAGGTTTCTGCCATAAGCTGTATGAGATCACCATGGAACCGCAGAGCAGGGCCCCTTACTTGCTTCATGCAGGGCATGCCATTCATTCACACAAGCACACGGTAGAGTTAGTAAAGCATGGCAGAAAACGTGTTCGCTAAGAGAACAAAGAACTAAAGCTCCAAGCTTCCTTACCTTGTCCTGAAGGATCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACACGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 4739 TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 11018 EMBV3_40102 AATTTCTGCTGGTTAAGCCACCCAGTCAATGGGATTTTTGTTATGAATCCTGAGCACACG Gene BVT0101_010873 + 1 EMBV3_32786 GK000015.2:34332244-34577487 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061051 TCONS_00061049 TCONS_00061050 1 XLOC_036909 NonCoding TCONS_00061051 XLOC_036909 NonCoding NonCoding - 15:34480825-34488580 - TSS45541 2399 3 TCONS_00061051_7 97 0.86494372655273 4 0.691127160175393 0.000150816807128379 2.54265112539268e-08 0.000148736905012692 4.04694179178679e-05 8.40141424503161e-05 9.2566028617809e-14 7.23395584509193e-05 2.68388346314817e-05 4.45548512557182e-05 7.3769532540612e-06 0 1.81619834609585e-09 3.92843548376432e-06 0.000304252580721194 6.13475146282388e-06 0 0 0 3.53698226265574e-09 4.82977147841159e-05 2.63349627797711e-06 0 0 0 0.000223274040510578 0.000154280089592958 8.51406017247853e-05 0 0 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 1e-124 452 95.71 0.116298457690704 0 noncoding 0 0 0 0 -0.0317200193442584 0.873841704420205 0.0365839467477067 0.434312682361079 ATTTGAGCTGAGACTGAGGTGATGAAAAGGAACCGGACATACAGACATCTGGGAGAAAGTTGTTTCAGGAAGAGAAAACAGAAGGTGCAAAGTTCCAGACTTTTGAGTGAGGTTGGCATGCTTCAGGAACCAAAAGAGGTCCACCTACGTGTCTGACCTACGGCAAGGGAAGTGGATATCTCAGGAGCAAAAGCAAATCTTCTCTGCAAGAAAAATTCTCCAGTCTCCATGTTAAGCCTGCAGATGTTCCATCTATTATAACAAACAGCGAGCTCACAAAGATCAACTAGAAAGAGAAGGCATGTGGGATCTCAACTCCCCAACCAGAGACTGAGTCCACCACACCCCCTGCATTGGAAGGTGAAGTCAACCACTGGACCACTGGGATCCAGCTTTGCCCAGGGATCAAACCCAAGCCGCCTCCATTGGGAAGTGGGAGCCTTAGCCGCTGGACCACCGGGGACATCCCTCTCACTGTCATTTTGATTCAATTTCCCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGCGTCTGACTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGTTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGGGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCCTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTGCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCCTCTCCCTAATGACTAGCAATTTGGCACAGTTTTTCATGTGTATATTTGTCAGATACATATCTTCTTTGATGTCATGTCTGTTCAAATCTTTAGCTCATTTTTCTACTGGGTTGTTTGTTTTTTATTATTGAGTTTTAAGATACTACTGTTGACTGAATTGTGTCCCCACAAATTCATACGTTGAAGCACTAACCCCCTATCCCACTACTTCATGTATTTGGAAACAGAAGTTTTAGAGGTTAATTAAGATTAATGAGGTCATAAGGTTGGAGTCTAAGAATTGGTGGCCTTACACGAAGGTAGTGCCTGGGCCCTGAGGACAGGCTTTGTGAGGACACGGGAAACAGGCTGATGCTACGGGCCAGAAATAGAGTCCTCACCAGCGCTCAGCCCTGCTGGCACTCTGATCTCAGATTTCTAGACTCCAGAACTGAGAGAAAATAAATTTCTGCTGGTTAAGCCACCCAGTCAATGGGATTTTTGTTATGAATCCTGAGCACACGAGATGGATTACATATATCTGATACGTATGGATATGTAGACATACACCCACATGTATGTAACATATGCATTTTTCTTATTACAAGCCCTTATGAGATATATGCTTTGCAAATACTTTCTCACAGTCTCAGGCTTTTCCTTCCATTTTAAAAACTGTTTATAGAAGAACAGATGTTTTTAGTTTTGATAAAGTTCAATTTATTAATTCTTTCCTTTTGGAAACATGCTTTGTGTGTCAAATATAAGAAAACATCGCCTAACTCAAGGTCCCAAAGATTTTCTCCTGTGTTTTCCCTTAGGAATTTTATAGGTTTATGTTTTAGGTTTCAGTCTGTAATTAATTTTGAGTTAATTTGTGTTTCATGCAAAGTATGAAGCAAAGTACAGTGGGGGTTTTCTTCATGTAGAAATACAGTCACTACATATTGTAGCTTTATAATAAATTTTGAAGTCATGTAGTGTTAGTCTTCCAACTGTATTCTTCTTTTTTCAAAGTTGTTTTGGCTACTGTAGGTCTGCATTTCTAAATAAATTTTGGGATCACTGTGATTTTCTTTTTTAAAATATTTATTTTGCTGCACAGGGTCTTAGTTGCAGACTATGGGATCTTAGTTCCCTGACCAGGGACTGAACTCGGGCCCCTTGCATTTGGAGCATGGAGTCTTAACCACTGGACACCCAGGGAAATTCCTCAATTAAAAAAATATATATATCTGCTGGGATTTTGATTGAGATTTCATTGAATATATACACCACTTGGGGGGAATTAACATTTTAGCAATGGTGGGTGTTTCTGATCTTTGAACACAGTGCATGCGTGCTAGGTCACTTCAGTTGTGTCCACCTCTTCAGGACACTATGGACTGTAGCATGCCAGGCTCCTCTGTCCATGGGATTATCCAGGCAAGAATACTGGAGTGGATTGCCGTGCCCTCCTCCAGTGGATCTTCTCCACCCAGGGATCAAACCTGTACCTCCTGCATTGCAGGTACATTCTTTACCCCTGAGCCACCAGGAAAGCCCCTTGAACACAGTATGTCTCTCTATTCACTTAGGCATTTTTGCCAGATTTATCCCTATGTATTTCATTTTTTGAATGTCATGTAAATGATTTTAAAAATTGTTTC TCONS_00058912 TCONS_00058913 r 5' 94649 TCONS_00058912 TCONS_00058913 r 5' 88908 EMBV3_24989 ACTATACAAATGTGCCGGAGAAAGAGCCAGATACTTCATGCTTATTATGTCTTAGAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03014 GTCTGGAAGTGGGCCTCTAGTTGACCTCCTGACAAACACCCCAGAGGCAAACAGGAAGGC Gene GeneID:507901|GTSE1:NM_001101890:16_cdna Constitutive 0 NULL GeneID:507901 5 GENE GTSE1 MGC165919 G-2 and S-phase expressed 1 EMBV3_07794 TGATGACAAGGGGCTGATAGCCTGAAACTTACCTTCCATTATCCCTGGATTTGGGGGGAC Gene GeneID:517433|TNN:XM_002694153:554_cdna Constitutive 0 NULL GeneID:517433 16 GENE TNN NULL tenascin N EMBV3_08379 CCTCTTGCCCTCCTAGCATCATGACCACAAGAGAACGACTCGGGCCCTTTGGACACAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11495 AGCCCTACTCTCCATGTCCAGCCTTAAACCCCTCTTGTTCCTACTCCAGATTCTTCAGAC Gene BVV0101_034167 - 1 EMBV3_11085 GK000011.2:100132439-100143652 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25488 TGGCAGCCACACATCAGATAAGAAGTGAAAGGTGAGGCAGCAGAAATGCCTTTAACTGGT Gene BVV0102_069462 + 0 NULL GK000010.2:86722248-86727235 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015223 TCONS_00015224 TCONS_00018310 TCONS_00018311 2 XLOC_008440 XLOC_009220 Coding TCONS_00018311 XLOC_009220 Coding Coding NEK9 10:86722408-86762455 = TSS12336 8453 1 TCONS_00018311_4 977 0.0154974565243109 22 0.789467112820257 0.00012470244101732 6.93406109614336e-05 4.54537198225849e-05 2.2664250422903e-06 0.000167309240181636 2.22480748024139e-08 2.59037634850676e-05 6.71223991537564e-05 7.45133524721497e-09 4.57611380615538e-05 0.000111965784288353 8.75114998261672e-05 1.44496847762992e-06 2.93090705153779e-08 3.69378902860204e-12 0.00491171327524253 0.00115976497909116 0.00111917289252468 9.63920522051789e-08 1.20162203504823e-05 5.06271895443944e-05 0.00204093104782291 9.04966742460514e-08 0.000866976380493064 3.68946206590243e-09 1.61147502090684e-07 5.40734485896326e-05 0.000470893161935127 0.000358699800888227 0.00113723770515955 NM_001206060.1 NEK9 Bos taurus NIMA (never in mitosis gene a)- related kinase 9 (NEK9), 0.0 6448 100.00 0.422808470365551 NM_033116.4 NEK9 Homo sapiens NIMA-related kinase 9 (NEK9), mRNA. 0.0 6583 86.73 0.632438187625695 TCONS_00018311_4 sp|Q8TD19|NEK9_HUMAN NEK9_HUMAN Serine/threonine-protein kinase Nek9; 0.0 1905 96.22 0.998976458546571 4 coding 0 0 1 1 -0.0825468027149875 0.567045483334055 -0.0171488651145395 0.707976846082071 AGCGCCACCGGGGACACTCAGGCTGGTCCCGTCCCCGCCGCCGCCGCCGCCATGTCGGTGCTGGGCGAGTACGAGCGACACTGCGACTCCCTCAATTCGGACTTCGGGAGCGAGTCCGGGGGTGGCGGGGACTCGGGCCCGGGGCCCAGCGCCGGTCCGGTGCCGCGAGCCAGCGGCGGCGCGGCGGAGCAGGAGGAGCTGCACTACATCCCCATCCGTGTGCTGGGCCGCGGCGCCTTCGGGGAGGCCACGCTGTACCGCCGCACCGAGGATGACTCATTGGTCGTGTGGAAGGAAGTTGATTTGACCCGACTCTCTGAGAAGGAACGTCGTGATGCCTTGAATGAGATTGTTATTCTGGCGCTGCTGCAGCATGACAACATTATTGCCTACTACAATCACTTCATGGACAATACCACCCTGCTGATTGAGCTGGAATATTGTAATGGAGGGAACCTGTATGATAAAATCCTTCGTCAGAAGGACAAGTTGTTTGAGGAAGAGATGGTGGTATGGTACCTATTTCAGATTGTTTCAGCTGTGAGCTGTATCCATAAAGCTGGGATCCTTCATAGGGATATAAAGACATTAAATATTTTTCTGACCAAGGCAAACCTGATAAAACTTGGAGATTACGGCCTAGCAAAGAAACTGAATTCTGAGTATTCCATGGCTGAGACGCTTGTGGGAACGCCGTATTATATGTCTCCAGAGCTCTGCCAAGGAGTAAAATACAATTTCAAGTCTGATATCTGGGCAGTAGGCTGTGTCATTTTTGAATTACTTACACTGAAGAGAACATTTGATGCTACAAATCCACTCAACTTGTGTGTGAAGATTGTACAAGGCATCCGGGCCATGGAAGTTGATTCTAGCCAGTACTCTTTGGAACTGATCCAAATGGTCCATGCATGCCTTGACCAGGATCCTGAGCAGAGACCCACTGCAGATGAACTTCTGGATAGACCCCTTCTCAGGAAACGCAGAAGAGAGATGGAGGAAAAAGTCACACTGCTTAATGCACCTACAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCACCCATTGCTGTGGTAACATCCCGAACAAGTGAAGTCTATGTCTGGGGTGGTGGGAAATCCACTCCCCAGAAACTGGATGTCATCAAGAGTGGCTGTAGTGCCCGGCAGGTGTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAGCTATACACTTGGGTGAACATGCAAGGGGGTACTAAACTCCATGGTCAGCTGGGCCATGGTGACAAAGCCTCCTACCGACAGCCAAAGCACGTAGAAAAGTTGCAAGGCAAAGCTATCCGTCAGGTGTCATGTGGTGATGATTTCACTGTCTGTGTAACAGATGAAGGTCAGCTCTATGCCTTTGGATCTGACTATTACGGCTGCATGGGGGTGGACAAGGTTGCTGGTGCTGAAGTCCTAGAACCCATGCAGCTGGACTTCTTCCTGAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGATAATCATGTGGTGGTTTTGACACGAAACAAAGAAGTCTACTCTTGGGGCTGTGGTGAATATGGACGCCTGGGTTTGGATTCAGAAGAGGATTACTATACACCACAAAAGGTGGATGTTCCCAAGGCCTTAATTATTGTCGCGGTTCAATGTGGCTGTGATGGGACTTTTCTGCTGACCCAGTCAGGCAAAGTATTAGCCTGTGGACTCAATGAGTTCAACAAACTGGGTCTGAATCAGTGCATGTCTGGAATCATCAACCATGAAGCATACCACGAAGTTCCCTACACCACCTCCTTTACCTTGGCCAAACAGTTGTCCTTTTATAAGATCCGTACAATCGCCCCAGGCAAGACTCACACTGCTGCTCTTGATGAGCGAGGCCGGCTGCTGACCTTTGGCTGCAACAAGTGTGGCCAGCTGGGCGTTGGAAATTATAAGAAGCGTCTAGGAATCAACCTGCTGGGGGGACCCTTAGGTGGAAAACAAGTGATCAGAGTCTCCTGTGGTGATGAGTTTACCATTGCTGCTACTGATGATAATCACATTTTTGCCTGGGGCAATGGTGGTAATGGTCGCTTGGCAATGACCCCCACAGAGAGACCCCACGGCTCAGATATCTGCACTTCATGGCCTCGGCCCATCTTTGGATCTTTGCATCATGTCCCAGACCTGTCTTGCCGAGGCTGGAACACCATTCTCATTGTTGAGAAAGTATTGAATTCTAAGACCATCCGTTCCAATAGCAGTGGCTTATCCATCGGAACTGTGGTTCAGAGCTCTAGCCCAGGAGGTGGCAGCGGTGGCGGAAGAGAAGACGACGACAGTCAGCAGGAATCTGAAACTCCTGATCCAAGTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAGGCATGGAAGGGCTTGTCAGTCCCACTGAGGCCATGCGGATCAGCAGTGGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAATTCATCCCTATGCCTGACAGCCCATCTCCCCTAAGTGCAGCTTTTTCAGAATCTGAGAAAGATACTCTGCCGTATGACGAGCTACAAGGACTCAAGATGGCTTCCGAAGCGCCTTTGGAACACAAGCCCCCAGCAGGAGCCTGGCCACCTCGGCTGAATCCTGCAGGAACATGTGCTGGGAAGGGAACACCCTTGGCTCCTACCTGTGCATGCAGTTCTCTGCAGGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTGAAGTGTCTGGCTGAACAACAGAAGTTACAACAAGAAAACCTTCAGATTTTTACCCAACTACAGAAGCTGAACAAGAAATTAGAAGGAGGGCAGCAGGTGGGGATGCATTCCAAAGGAACTCAGACAGCAAAGGACGAGACGGAAACGGATCCAAGGCCTGACTTAGATTCAGATTCCTGGTGTCTCCTGGGAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTCTAGCCTCCAGGAAACTGGGATCCAAAGACCTTCACAGCACACTTACTGAACGCAGAGCGCGCTTTCCTGGCTTCGTTCACTTGCAGACAAGGAGCGCGAGGCGGAGGTTCTGAAGCACTTTCCATGTACACTTGGAGAGTAGCACTGCCTATTAGGATCTAGGAGTGGTTTTGTGTTGGAGAACGGAGGGCCCCATGGCCCTGGCTTTGTCCTCAGTGACTGCCATAGCAACAGCAGCTCTGTACCTCATCTGGTGATCCCACCTTTGAAGAGGAGACACGATGCTCACGTTCATTTTGCTGCTAGCAGCTTATATCCCACTTATCACTTTCACCGTTAATTGGAAGCTGCCTTGGGAATTCAGTGCCAGGCATTGCACCTCTGGGTGGAGGAGGTTAAAGTGTAAAGCTGAAGAGGGCTGCAACCAGGTGCGGCCCATCCAGGGTCATCTGGAGAGTGGTGAAGTGTTCCAGGCCCTCTCAGGAGCCTTAGTCCAGGAAAGTATGTCTGGTGGAGTCAATCTCCAGCTTGTTTTCAGAAAGTTGAATTACTTTGTGCAGCTAAATGCTTTAGGAGGAACAATGGGCTTAGGTTGCTTTTCCTCTGAGAGTTGAGTGGAACTTTTTCAGTGAGGAGTAGAGAAAGAAGGGCAGGTCCCTCCTCGTCACACAGCAGGAGTGTCAGGGTGGGATTTCCTAGCTTTGGAAAAGCCTTTTGAGAGGTAAAGTGTCTCATAGAGAATTGAGTCCATGGGGCAGAAGAAATAGACTTTGGAGGAAACCATGAGGGGAGGTCCTCCTTAGCTGCCTCGGCTTGGCATCTTCGAGAGGACCTAGAGTGACTTGAGTCTTCTCCCCGGAGAAGGCTACTTGTGCCTCTGCCTTCGTGGCTCTTAGGGTTCTAATCTTGACATCAGCAGCCCCAGCCACTCCCTTTCTGTATGTCTAGTCAGTATTTTTCCCCTTTTGGTGTTTTATGAAGCCATATCAGTGAATCTGTATCATCTTTCCTACTTGAGTGGCCCAGAGCCAGCACCAAAACCTGGCAGTCCCTGAAGCCTGACAGAATAGGAGGATCCTGCCAATTTTGAGAGGAATTTGGCTGAGAGCCAATCCCCGTGTCTTCATGTCCTTGTAGACAGGAGCAAGCCAGCTCTTCCAAAGAGAGCAAGTGTCCTCGAAACGTTTGATGATTTTACTTAAGGAGGTGAGCTTTGTGTTTCCAGCTCACCTTTACATGAGCTGCCTTGATGACTGTCACATCCTACCTCCTTAGAAAGAGCTAAAATGATCTGTTTCATTTTCCCCAACCAACAAGTAAATGTTTGATATCTATTTAATATTTTGGAAGGACCTGTGCAATGGAAATTTTGCCATTTTCCCTAAAATTGGTGGTGTGAAGGCTGCTGCTCCAGGAAAACCCCACAGCTGGGGATGGGCAACTCTACTCAATGGGATCTTCTTTGGTTTGATATTCCCATTGTTTTCTCAATTCTGGGAAGCCTAGTACAATGGTACTAATGTAATCACCGAAGCCTTTTCTTAAAATAAGGGAAGGGGCCAACCCTGGATTAAAGTTACAAGTTCTGGGGACTTGGGGGGTTTGCAACAAACCCTAACAATGGGTTTTGGTTCATCATGTAAATGCAACTTTGATTTTTTTTTTTTTTAAAAGGACTGACTGGCCTTTCATGTTCCTGTATCCCTTATGCTCACCATCTCAGCAGGCCTGAGAGGCAGGGTCAGTTTGGGTGTTAATCATGAGTATTGCTTGTGCCATGGAACCGAGGGACATGGGCACGTTGCTGAGACCGTGGGGTGAAGGAGCACTGAAGGGAGGGTGGGAGCCCTGGCTCCAGAGAGGGAGTCACTCTCCAGCAGTGGAACGCTGGGATCGTTTGCTCTAGCGTGTTCCCTTGGGAAGTCTTGGTTTGCTGTTAATCTGGCTGAGAATCTAAGTTCTGTGCCTTAGAGACAATTTGCACTTTCCCAAATTGTGCCTGGGACAGCCATATGATTTTTCCCACCAGAAAGCTATGCAAACAGAAACCAGTTCATAGGTGGCAGCCACACATCAGATAAGAAGTGAAAGGTGAGGCAGCAGAAATGCCTTTAACTGGTTTTCTGTAGCTAATTTTAAATTGTGTCCTACTTTTCTTCTTTATGTAGTGCTAGGTGTTTTAAGTTTTCCAGTAGTATTGCTTTTGCATTATAGTATAACCTGAGTTACTCCTTTGCTCTGACGTTGTTGCTGAAGAATTAGCTTATTGTTAGCCAGATGTTTGAAAGGTTGAGGGTGGAGTGGTTTGGCATTTCTGTTTTAAATAAACATTTCAACTCTCAATCAGCGCTATGCCTCAGTGAGCCCGCACATGGACCTTAGTCACTGGGGATCAAACACGCAGACTGCAGGCCTTCGTGGATCTTCGATTCAGTGAGTCTTCATATAAACAAATAAATGCAAGGGGCATTTGCAAAGAAATTATCTTTGCTTGTTTCCAATTTGTTTTTCTTGCTAATAGAATCATTTTTGCTGCTATAACTTTCTTCCCCCACCCCAAACTTTTAAAATATAGTGCTTAAAGTGCAGAAGGAAAAAAACATGAGCCATTAAAAGCGGAAGGGTGATGTCTTGTACTTATCTCCTCAGTTACAGTGGGCTTTTTCAAGTGATACTGCCAGTTTATGTTTATAAAACTGTTTTCCCTCAAAAAGGCTGAACTGTATTTGGTCTCCTTGACATAGCACAGCCAAGTTGTAACTTCTCTTGGCTGAACATTTCACTAAAGTTAAAAGCAAGAACAGACCTAAACTCATATTTCATTTGATTTTGCCATATATTTGGAAACATTCATAATAGAACAACTCTGGTGCAAGGATGTATTATAAATAAATTATTTCAAATGAGCATCCCTGGGCCTCGAAAGTAGTAGTATTCATGATAATGTCAGGGCAGAGTGGCTGTAGTCAGGACTGCAAAAACATGTTCCTTCCAGCCACAAAGCAAAAAATCACTTATCGCTGCAATGATTAACCATGGAGATAATTTAGTGGTTCATGCTGATCATTAAATCTCACAGAATCATGAACATTAAGGAGGGAAACACTATATCATTTCTCTGCTACCTCCTGTGTAGCTGTGAAAAGTGACAAATTGATGACCTACAGCAAATGTTGGCCAAAGGTGCTGTGTTGCATTCAACAGACTGCTGTTAATACTGTCTCAGTATGTCTGCATATACTTTTCAACAAAGTGAGTCTTACTGTGAGATTTTTTTCCCATTGCTTAACCTTTTGAACTTTAAAAATTTATAGCGTCTACTTACTAAAGGTTCTTGGATACAGTAGTATAACACAAAGACATTAACAAGCAGCATTTATTTATCCTCTGTCATCCTCTGCTATCCAGGAAGAGACTTAGAAAAAGGGTTCTTTCTTCTTCCCAAAGATCCAATCAAGCGAAATTTAAAAGACTAATGGATATTCCTGTTATAATCAAGGCCTAAACATGTTGAGATCGAAGGGAACACTAGGGCACTGACTATTGTTTATTTCTCTAGCAGCGTAAGAAAGCGCTCCCCACACACACATTTGTTCTCCCTGGAGGCCCCTGGCCTGTGACCTTATAACATCATCCAGGGCTTCTGACCAGACAGACAAGGCAAATAAGTGAAGCACGCTAGGCGGGTGGTGCCCTCTGTGCTCCACCCCGTCTGGAAGGAGCAACTGGTTCCGAACCCCACTTGGTGCTGAGTAGAGCTGCAGGCCCAGGGTTTCCAGAACTTCCAGTTTTTCAAAAGATGCTCCATATCACCATTTTTAAATGTCAGATTATACTTTGAATGCTATGTCAGTCAAAACATACCTGTGAAGCAAAGCAGTCCACAGGCTACCACTTCGTGACCTTGGCCACCACTCATTGTCATCATCTATTGCTTTTACTATCAAGTGTGAAACTTAAAAGTGGGTACCTCATTAAACTTGCCGGGGAACTGTGTATATTGGGTTAAATATCTGCTGTTCCTCTGTGAGGTTTCTTTAAATGAACAACCAGAGGCGCCATTAGGTTATACCTCTTTTTCTTTGTAACAGGAAAAGCATAAAGCAATACATGCTGTTTTTTAAAATATATATGATTTTGTTTTCAGCCTAGTGTCCAGCAGCTTCACAGCTAAAGCCTTAAAGATGGGCATATCAAATTGGTCTGATCTGTTGGCCCAGCCACTCAGCAGAAGCTGTAGAGGAAATGGAACAAGAGTTAAGTGGCCATCTGTAGTTAGTTAATATGGCTTTGTGGTCTGCACAGTCCCCTTTGCCCAGGTCAGCTTCATTGACTTTTCTCCAGTATCTTAAACTAACAGTTTGAGTAATGCTCTCAGGACAGTAATCTTATTAGTATTTCAGATCTTTTGTGCTCACTTCATTCTACCTGAACTGGTATTTCCCCCATTAGACACTGCCTTATCACTTCTCCTGTTTGACAAGTCTGAAAGTGAAGTCACTCAGTCGTGTTCGACTCTTTGCGAACCCATGGACTGTAGTCTACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTCCTTCTCCACTGACAAGTCTAGGACTCACTCATTTTATGATTTAATTTTAAATTCACGAAACCTATTTTTTCAGTGCCTAATTATGAAGGTTACTTGCAGTAGGCACGATTCTGCTGAGAAAATTTTAGATCTGGCATCTTTTCCTTCAGAGTTTACTTTTCAGAAGAGAAGTTTACTGTGATATAATCAGTACAGACATGTGACACTGAAATGTCCCAGCTTGCTTTGGGGGTACATTTTGCTGCGTCATTTTAAAAGTAATCAAACCAAAATGATTTGAAAGCAGAGTGCTAGCAACAGCTGAAATTAAAGTTCCTTCCTTTTTTTTTTTTTTTTTTGACATATGAAATCCATTAGAAAAGAACAACTACAGAGACATAATGTGCTTTCTCCCACCCCTACCCTGTAAAGTACATAAAGATGAGGTTCCCTTTATTACACAGTACAACATGGGGAGGGTTTAGGACATACTGGCGCCCCAATCTTACATACTTGTATTGACTTTCTGCCAGGACCATGTACCAGGGAGGTCATTTGCCTTACAGCAGAAGTGTATTTTTTATAAGAGATACCATGCATGATCCTGTGACACCAGTGAGCCAACTTCTTACAAGAACGAGAAGAGTTAACCAAACATGCAGAGGCAGTGGCAAGAAGGCACAACAAATGCAGGCATTTAACTAGCACAAACCATAATCAGGCTTGCGAGAAGAGAGCTTTAATGTAGCCTGCTCACTGCTCTTAAGTTTCTTCACCCATCAGTTCTCAGAGCAATTACATCAGGCACATCAGCCGGAGGTGGTGATTTAGTGGGAAGCTGAGGCTTCTTTTTGCATCTTGCTGCTTAGCAA EMBV3_22651 GGCCTCTGGGTAGGATTGGCGTGTTTCTGGATTATGACAATGGAGCTGTGAGCTTCTATG Gene GeneID:520034|LOC520034:XM_002699044:83_cdna Constitutive 0 NULL GeneID:520034 29 GENE LOC520034 NULL similar to tripartite motif-containing 43 EMBV3_15469 GCACTCGTTGACAGACTGGAGTCAGAAGCTGACAAACCAACATGCGGCACAGTCAATAGT Gene GeneID:520694|LINGO1:XM_002696672:302_cdna Constitutive 3 NULL GeneID:520694 21 GENE LINGO1 NULL leucine rich repeat and Ig domain containing 1 EMBV3_28540 ACAAGACTTCAAAACTAAGTCACATTTTTTCAGGTGCAGACATCCTTGTGGGTGGGAAAG Gene GeneID:534112|CNKSR2:XM_002700350:12_cdna Constitutive 2 NULL GeneID:534112 X GENE CNKSR2 NULL connector enhancer of kinase suppressor of Ras 2 EMBV3_20911 AGTAACCCCTAGCCCGATGTCTACATGGTGCATCTCAAAACCCTAGCACACTGGTGTTTC Gene GeneID:100337444|LOC100337444:XM_002690295:29_cdna Constitutive 0 NULL GeneID:100337444 9 GENE LOC100337444 NULL androgen-induced 1-like EMBV3_39815 ACCTAAAGCCGCCTCAGCCTCCATGAGCAGCATGAGTGAGGGGGATGAGGATGAGAAGTA Gene GeneID:526175|PCYT1B:XM_002700325:40_cdna Constitutive 0 NULL GeneID:526175 X GENE PCYT1B NULL phosphate cytidylyltransferase 1, choline, beta EMBV3_32437 TGCACCGCTGTGCCCCGGGACTCGGGAACCGAGTCGGGTTTGGCCCTGAGGCTGGTGAAT Gene GeneID:100337466|LOC100337466:XM_002698606:35_cdna Constitutive 0 NULL GeneID:100337466 26 GENE LOC100337466 NULL mucin-like EMBV3_13128 GTTCTGTAGCATGAGATTCATAACAACAAGACTTTCCTGGTCCCCTAGCAGCAACTCTGC Gene BVV0102_351435 + 1 EMBV3_02252 GK000008.2:95826163-95847667 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06884 AGGGGGGCCCTGTGGGCTGGGGAACCACTGTTGGGGATCTTTTCTATACCAGATTTGTAA Gene GeneID:511053|SLC27A3:XM_002686020:438_cdna Constitutive 0 NULL GeneID:511053 3 GENE SLC27A3 NULL solute carrier family 27 (fatty acid transporter), member 3 EMBV3_26222 GCTTGGGGGTCTGGTGTGTCGGCGAGCCCTTGCAGCGGAACCTTGCCCAGATCCCGGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37610 CTCAGCGCAGAGATACACTCTTTCTTTTTGGAAGGGGTACAAGGTTTGGTAGTACTTTGC Gene BVV0102_209830 + 0 NULL GK000001.2:87017224-87718518 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09162 CCTACGGCTTCAGCTGCGATGGGGAAGGTGTTCTTAAGTTTGCCCGCCTTGTTAAGTCTT Gene GeneID:511545|C5H12ORF57:NM_001075525:31_cdna Constitutive 0 NULL GeneID:511545 5 GENE C5H12ORF57 MGC134499 chromosome 12 open reading frame 57 ortholog EMBV3_18535 CATTTGAAACTACCCCCATCCACCTTTTATCCCCTTAGCCAGAAGAGAACGGTCACAGGG Gene BVV0101_015555 + 0 NULL GK000009.2:23793834-23936683 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15391 CGGACCTTAGAGAGACCTACTCCCAGCTCGGGACAGACCCTGAAGAGGCCATCCTGAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00383 GAATAGACCACAGTCACCTCCTGGGCATTAGTGTCATAGAGCAGTGAAATTCTGTCTTGG Gene GeneID:532671|MCOLN2:XM_002686288:145_cdna Constitutive 0 NULL GeneID:532671 3 GENE MCOLN2 NULL mucolipin 2 EMBV3_24191 GAGCCGCTGGGTGGGCAGAGAGGAGGTAGAGCCTATAGGCATACTTTATTTACAAAGAGG Gene GeneID:531382|METTL14:NM_001083714:36_cdna UTR3_Alt 2 NULL GeneID:531382 6 GENE METTL14 MGC138979 methyltransferase like 14 EMBV3_41847 GGGGAGGACGGCTTCCGAGGGACCGCGCCTAAAGGCCCCCCTTCTGGGAAAGACCGGGTG Variant GeneID:536435|SUMF1:NM_001076076:53_cdna 842^955 1 EMBV3_07350 GeneID:536435 22 GENE SUMF1 MGC139360 sulfatase modifying factor 1 EMBV3_28746 CATGTTTGTCCTCCCGTGACTGAGCAACTTGTCAACAAACTGTATTATGGAAATCATGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15560 ATGAGACTATAGACAGACCCGTCCACATTGATATGTCCTGCTCAGGCGCAGCTTCTCTAG Gene GeneID:616031|GK5:NM_001035473:75_cdna Constitutive 1 NULL GeneID:616031 1 GENE GK5 MGC40579 glycerol kinase 5 EMBV3_25959 CACCCTCCCAGATAATCAGTAAAGGCGTGGAAGACAACACTTTGAACCAGCTTGACCTAA Gene GeneID:100141141|LOC100141141:XM_002695512:325_cdna UTR3_Alt 2 NULL GeneID:100141141 18 GENE LOC100141141 NULL similar to zinc finger protein 132 EMBV3_06366 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08016 TCAGAGCAGGCTGCAGAGCCAGATGAGTGGGCAGCAGCTTGTGGATCAGAGCCACGTGGT Gene GeneID:614728|COASY:XM_002695993:374_cdna Constitutive 0 NULL GeneID:614728 19 GENE COASY NULL Coenzyme A synthase EMBV3_28554 GCCTGGTAGTTCAGCTGCACTGCAAATATGGGTCCTGGTGGAGGCTGTTCTGCCTTTCCC Variant GeneID:504647|RAD9A:NM_001014848:503_cdna 452^551 2 EMBV3_28188 GeneID:504647 29 GENE RAD9A NULL RAD9 homolog A (S. pombe) EMBV3_31428 TTGACTATGATGGCTAGAAAAATGAAAGACACCGACAGTGAAGAGGAAATCCGCGAGGCG Gene GeneID:617095|CALM1:XM_002691114:40_cdna UTR3_Alt 2 NULL GeneID:617095 10 GENE CALM1 NULL calmodulin 1 (phosphorylase kinase, delta) EMBV3_16211 GGAACTGTCTTTCTGGTATATTTCCAGCCCTCATCCTCGTACTCAGCAGACACTGGAGTG Gene GeneID:525818|LOC525818:XM_002691596:152_cdna Constitutive 0 NULL GeneID:525818 11 GENE LOC525818 NULL similar to olfactory receptor Olfr367 EMBV3_30177 AGACAGCCCAAACCATCTGCTGAGGCAAGGACCAAAGAGCCAGTCCCTCACATACTTTCA Gene BVT0102_193103 + 0 NULL GK000006.2:71053459-71186359 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30114 GAGATACCAAGGGAACATTTCATGCAAAGATGGGTACAATAAAGGGCAGAAACAGTATGG Gene BVT0102_010722 + 0 NULL GK000003.2:7463617-7528021 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00200394 TCONS_00241894 TCONS_00060488 TCONS_00166765 TCONS_00060490 TCONS_00008657 TCONS_00250480 TCONS_00239297 TCONS_00201862 TCONS_00195691 TCONS_00135762 TCONS_00085917 TCONS_00195689 TCONS_00030483 TCONS_00160911 TCONS_00089611 TCONS_00007349 TCONS_00010463 TCONS_00230779 TCONS_00126152 TCONS_00098636 TCONS_00022599 TCONS_00150665 TCONS_00019139 TCONS_00085918 TCONS_00023338 TCONS_00153688 TCONS_00022195 TCONS_00141269 TCONS_00214518 TCONS_00002148 TCONS_00167904 TCONS_00021743 TCONS_00098773 TCONS_00153036 TCONS_00020686 TCONS_00197922 TCONS_00153235 TCONS_00126153 TCONS_00221284 TCONS_00085919 TCONS_00130095 TCONS_00222741 TCONS_00066396 TCONS_00188448 TCONS_00126150 TCONS_00251060 TCONS_00165726 TCONS_00253634 TCONS_00017324 TCONS_00060492 TCONS_00126154 TCONS_00195688 TCONS_00168153 TCONS_00131340 TCONS_00221465 TCONS_00028151 TCONS_00090555 TCONS_00032664 TCONS_00060495 TCONS_00031669 TCONS_00221624 TCONS_00118462 TCONS_00254557 TCONS_00078427 TCONS_00039905 TCONS_00253127 TCONS_00207104 TCONS_00115895 TCONS_00190026 TCONS_00070513 TCONS_00199615 TCONS_00028152 TCONS_00189731 TCONS_00198653 TCONS_00108035 TCONS_00025023 TCONS_00060491 TCONS_00081014 TCONS_00017330 TCONS_00179467 TCONS_00060497 TCONS_00184149 TCONS_00229688 TCONS_00126148 TCONS_00019469 TCONS_00249379 TCONS_00161889 TCONS_00184150 TCONS_00244513 TCONS_00122398 TCONS_00060493 TCONS_00188837 TCONS_00017325 TCONS_00089257 TCONS_00060496 TCONS_00117236 TCONS_00025243 TCONS_00176206 TCONS_00118367 TCONS_00025022 TCONS_00250957 TCONS_00239556 TCONS_00054167 TCONS_00242050 TCONS_00126142 TCONS_00180497 TCONS_00028149 TCONS_00028150 TCONS_00031376 TCONS_00168038 TCONS_00060489 TCONS_00106729 TCONS_00019865 TCONS_00243251 TCONS_00066402 92 XLOC_122046 XLOC_148558 XLOC_036754 XLOC_101601 XLOC_004214 XLOC_153423 XLOC_145963 XLOC_123507 XLOC_118120 XLOC_081985 XLOC_051996 XLOC_016736 XLOC_097804 XLOC_054395 XLOC_002910 XLOC_006014 XLOC_140269 XLOC_077380 XLOC_058881 XLOC_013269 XLOC_091924 XLOC_009819 XLOC_014005 XLOC_093450 XLOC_012866 XLOC_085697 XLOC_130711 XLOC_000524 XLOC_102740 XLOC_012416 XLOC_059017 XLOC_092801 XLOC_011361 XLOC_119583 XLOC_093000 XLOC_134600 XLOC_078806 XLOC_136048 XLOC_041110 XLOC_114491 XLOC_154003 XLOC_100609 XLOC_156573 XLOC_009008 XLOC_102988 XLOC_080045 XLOC_134779 XLOC_015421 XLOC_055335 XLOC_018904 XLOC_017916 XLOC_134937 XLOC_072622 XLOC_157489 XLOC_047315 XLOC_023722 XLOC_156068 XLOC_125623 XLOC_070064 XLOC_116061 XLOC_042291 XLOC_121268 XLOC_115769 XLOC_120307 XLOC_063945 XLOC_014641 XLOC_049896 XLOC_109240 XLOC_111286 XLOC_139182 XLOC_010149 XLOC_152322 XLOC_098774 XLOC_150485 XLOC_073953 XLOC_114878 XLOC_054042 XLOC_071402 XLOC_014707 XLOC_105985 XLOC_072533 XLOC_153900 XLOC_146222 XLOC_031976 XLOC_148714 XLOC_110264 XLOC_017624 XLOC_102874 XLOC_062882 XLOC_010544 XLOC_149914 XLOC_041116 Coding TCONS_00002148 XLOC_000524 Coding Coding KPNA6 1:130554038-130650062 j TSS1087 8942 1 TCONS_00002148_3 533 0.14996645045851 14 0.907022275913063 0.00184732862768105 0.00093850257252498 0.00093144432138484 0.000839016563103704 0.000622259683289839 0.000621690241859758 0.000609249819638451 0.000785018685409651 0.000969813613089095 0.000378838462917357 0.000348637047027909 3.85813085707537e-05 7.53021224772005e-05 0.000252051271871783 0.000167965231853661 0.00307290147234152 0.00121321266983462 0.00236162068047607 0.00138441249735623 0.00158143484533257 0.000780032156380402 0.00160019915182693 0.00134945477287196 0.00169325907422776 0.00199533209833214 0.00190350587436953 0.000949115190101667 0.000988717919751754 0.000472526641673261 0.00113013043886115 NM_001075954.1 KPNA6 Bos taurus karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA. 0.0 3844 99.77 0.239655558040707 NM_012316.4 KPNA6 Homo sapiens karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA. 0.0 5717 80.48 0.682621337508387 TCONS_00002148_3 sp|Q0V7M0|IMA7_BOVIN IMA7_BOVIN Importin subunit alpha-7; 0.0 1099 100.00 0.99812382739212 6 coding 0 0 0 0 -0.469967689376629 0.254899751728717 -0.00387137542814384 0.940376917148435 AAAGATAGGCTCCTGAGGCACAGAGTTTAAAGCAACTTACTGAAGATTGCACAGCTAACAAGAAGAAGCGTCAGTATTGGGACTTCCCTGGTGGTCTAGTGACCAAAGACTTCATGCTCCCGGGCGGGGGGCCCGGGTTCTATCCCTGATCAGAGACCATGGCGAGCCCAGGGAAAGACAATTATCGAATGAAGAGTTACAAGAACAATGCCCTAAACCCTGAGGAAATGAGGCGAAGAAGAGAGGAAGAGGGCATTCAGCTCCGGAAGCAGAAACGGGAGCAACAACTTTTTAAACGGAGAAATGTGGAGCTGATCAATGAAGAAGCCGCCATGTTTGATAGTCTTCTCATGGACTCCTATGTGAGCTCTACCACTGGGGAGAGTGTGATCACAAGAGAGATGGTGGAGATGCTCTTTTCTGATGATCCTGACCTGCAGTTAGCAACCACACAGAAATTCCGGAAACTGCTCTCCAAAGAGCCCAGTCCTCCAATAGACGAAGTTATCAACACTCCAGGAGTGGTGGATCGGTTTGTGGAGTTTCTGAAGAGGAATGAGAATTGTACCTTACAGTTTGAAGCTGCCTGGGCTCTAACAAACATTGCCTCTGGAACCTCTCAGCAGACCAAAATTGTCATTGAAGCAGGGGCCGTCCCCATTTTTATAGAGCTGCTTAACTCGGACTTTGAGGATGTACAGGAACAGGCAGTCTGGGCACTGGGAAACATAGCTGGAGACAGCTCCGTTTGCCGAGATTACGTCTTGAACTGTTCCATCCTCAATCCTTTGTTAACACTCCTTACCAAGTCCACACGACTGACAATGACCCGGAATGCGGTCTGGGCCCTGTCAAACCTCTGCCGAGGAAAGAACCCACCCCCAGAGTTTGCAAAGGTCTCCCCCTGTTTGCCCGTGCTGTCTCGCCTACTCTTCAGCAGCGACTCAGACTTGCTGGCAGATGCTTGCTGGGCCCTCTCTTATCTATCTGATGGCCCCAATGAGAAGATCCAGGCAGTCATAGACTCTGGAGTCTGCCGGAGATTGGTCGAGCTTCTCATGCACAACGATAACAAAGTGGCTTCTCCTGCTCTGAGAGCTGTGGGTAACATCGTCACCGGGGATGACATCCAGACCCAGGTCATTCTTAACTGTTCAGCCCTCCCTTGCCTCCTCCACCTCCTGAGCAGCTCCAAGGAGTCAATCCGAAAGGAAGCTTGTTGGACCATTTCAAATATCACTGCTGGCAACAGGGCTCAGATACAGGCTGTCATAGATGCAAACATCTTCCCTGTATTGATCGAAATCCTTCAGAAAGCAGAGTTCCGTACAAGGAAAGAAGCAGCCTGGGCCATCACCAATGCCACATCAGGAGGAACCCCTGAACAAATCAGGTACCTGGTCTCCCTGGGCTGCATCAAACCCCTGTGCGACTTGCTGACTGTGATGGATTCAAAGATTGTGCAAGTGGCCCTCAATGGACTGGAGAACATCCTTCGGCTTGGAGAGCAAGAGGGCAAGCGCAGTGGCTCAGGGGTCAATCCCTATTGTGGGCTCATCGAGGAAGCCTATGGCTTGGATAAAATTGAGTTTCTGCAGAGCCATGAGAACCAGGAGATCTACCAGAAGGCCTTCGACCTCATTGAGCACTACTTTGGTGTAGAAGATGATGATAGCAGCCTGGCTCCCCAAGTGGATGAGACGCAACAGCAGTTCATCTTCCAGCAGCCTGAGGCTCCCATGGAGGGCTTCCAGCTATAATGTCTGCCTCCAGGGAGGGGAGGGGATGGGAAGCACCACCAACCAGCGGAAGAGCAGCCCTCTGGTGGGCGGGAAACCAGCCCCACCACCATCAGCCACCACACACCTCTGCTGCCCTGGAAACTGTGCTCTTGACCTGCTCCGACCCCTTCCCTGGAGGGAGCACCCTCTGGACAGACAGAACCATCTGAGGCTCACGTTTGGGTTTTGTGACAAGAAGGGGACGTGTTGGGTTTTTCTTCCTTACACTATATTTTGGCTGCACATATGTCTTTAACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAACCAATTTTGCACCTTTTTTTTTTTTTTTTTTTTTTTAATTTTTATTTTTTTCTTCTTTAGTGGTGACTTCCTTCCCTATTATCTTCCTTCATCCTTCCCAGTCCTCTGCCCTGATCTGTGTAACTCTTATCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGTGGGGGGGTGGGAGGGGATGGGAGAAATCCAAAACAAAGTGTTCTTGCTCTGACAGAATATTAATCTTGTATGCTTGGATTGAATTATTTAATTTTTTCTTTTGCACATTTTTTCTTGTATTAAGATTGCTCTTTCCCAGAGCCATGAGTTCCTGGTATTAAGAAACCCAGCTGCCAGCATTGTCTGGGACTAGAGACTGAGGGGGAGGTCACCATGAGAGAAAGGCCCCTCCCTCCCTCTAACCCCTTGCCCAGACCTCTTTAGTTTGGGAGATCCCCTTCACTCTTCTGGGGCATGTGCACCAGTGGGAGTGAGCAAGGAGGAACACAGGTCTTCAGACAGGGCTTCCCATGTGTCGCTACTGATCCCATGTTTCCTACCCACCTTCCAATGGTGCGACCTGATTTCATTTGTTTACTTGAAAATTCCCCTCAGAGTTGAAATGAACCTCTGAGGTAGCTGTATTTTCTCCTAAGCACGCGACAGAGGGCTATGGTCCTTGCTTTCTCCTGAGGAGAAAGTCCTTGCTCGGGTGACCCATAAGTTGCAGAGGAGGTTGGAGTGAGAGTGTCATGTATTGGGATAGCCAGGGGATCCTTGCCTTTGGCCTTTCTTCTCCTCCTTCTTCCTCTTCCATAGGTGGATCATGTATATTTGACTTCCAAAGGAGAGAATGTCAAAAAGTTCTGTATTTTTTTATATTCTATATATTAGGTAGGTCAATCTTATTTGGTCTCAAGAGGAAGAACTGTCCCTGTAATTTCTGTAAGTAGGATACCGTGAGGAAGACCAAAAAGAGATGTGGAAGTTCTTTGGCTCAGGAAGCCTGAACTTGATCCATCTCTCTGCTTGGGTTCCAGGCTACCACCTGGACAAACCCTTAGCCCTGGAGCCTTCATATCACAGGTCAGCCTAGTCTGATTGTCCCAGTACCTGAAGGGAGCAATGGCTCGAGGGCCTGGTCAAGTCTACCACTCTGGTCCTTAGAGCTGAGCATCCTGCTCGCATCAGGAAACCCAGACAGCAGTCTGCCTCCTCAGATTCAGTCTCAAATGCCCTTGTTCACGTGAGTTATCACAGGTGGCTTTCTCTCTCACTACAGAAATACAGCAGCTTCAGGACTTTTTTGAGAGTGACTGATAACTTCCTGGATTGGGATCCCTGTACATGGTTTGGATATTGCCCTTCCTGTGACACTTAAAATCCCAATGCCTTGCCTTTTCCCTTTGAGTAGAGCTACTGCAGTGCCTCACTGGCTTGCCTCTATGCATCAGTGGATTACACAGTAATGAAGTAAAGCCCAGCTGATGGGGTGAGTGGAGCAATTTGTTGGCTAAGTGTAGGCCAGTGGTGGAGCTGAAGGCACACTCTGTCTGCCCTGTCGCTGCTTCCCCACAGAGATCAGTTAGAGATGCCCTGGTCCAAGCTGTATTTTCCCTTCCCCAGAAACAATGCCATTCTTGCTCCCATTCCTACGTATCCCACCTCTGGCTCAGGTGAAATCCATGCCACTCTGCTTACGGATAAAAAGTTCAGGTCCTTTTGCCCATTGGTTTTGAATCTGCCCTCTTTTTCGAGTATTGAGATCCAACTCCAGAGGCGTTTTCTGAGAAAAATGGTTGGGACTAGTGGTTATCACTGAAAAGTGATAGCAGAGCCATACCACCTCAGTGAGTCAGATGCTCCTCTGCAGTTTGGCCATGATAATTACCAAGCCCCACTCTCCCTGGTAGGCAAGGGGCAGGACCCTCTTCACTTGGCCTGCTGACTCCATTACTCCTACAGTTCAAAAGAAAGTCACCCCACCCCTTGATCTTGTCCAACAGCCAGAGCATTTGAGTAAGAACTACTTCTTGTATCTCTAGCAATAGTTAAGTCCCTGACACTGGGGCCATATTCTTCCTGTGAGACGTACACATCCTGCCTTGCCCAGCTGTTCCTACTTTTGCTTCAGATCTGGGACATGTACTAAATAGAAGACTCTTCTGATTATCAGTTACTGCTTGAAGGCTGCTTTCTCCAAGGACTCCAAAGGCTGAAGTGTCTCCCAGGGCACAACCTGAGGACAAATTTCTCATCAGCTAACATGGCCTCTCGGAGCTTTCCTTTGTTTAGTGTCTTCCTCAGACTATGTTTTCCCATTTTATTCCTCTGACCCTCCTTTCAGTTAACAGGTGAAGTTCTTCGAGCCCCCTGAGATGGTAACATCATCTTTTGTGTCCCCCTCTCCTTTGTTCATCTTGCAAAGCAAAATATTGTTTCTTTTTAGCCCAGGCTTGACAGTCACTCTTCGTGGACAGCCCCCCTCTGGACTGCAGACCCTGGCCCAGGTGAAGGCAGAGTTTTCTGACAGATTTCTGAATGGATGTTACAGGGATGAAGGGGCTCCCCAGCCTGCTGTAGGGAACAGCCAGAGAAGACCTGTATTTGAAAGGTTAATGGTTTGGCACATAGTTATTTGCATTTTAAAATCTCTGGTGGGTTGGTGATGTTTAGGTGTGGATTTAGGGGACAAGGAACCGTTTTCTTAGCTAAAGTGTTCAAGTACTGTTTTGAACAGCTATTCATTTTTGCCAGCCCTTCTGGACATCCCACACCCACCCATCTTTGCTAGTCTTAGAAGACTGAGCTATCCCCAGTGACTGGCTGGCCTTGGTATTGGCTGCAACCTTGTTAGAACCACACAGGTTCCATCCTCACCTAGCCAGCCTGTTTACTTCAGGCAGTGGGTACAAAGGACCCTTCCAAGGACAGATGTAAAAGACTTCAGCTTTCAGGGACCCTTTGTGTTCCCCTTTACCTAGAACCCCTAGATCTACTCCCATTCTCTTTTCCCTTGGAAGACTTTCCAACAGCTCTATTTTTTAGAGCTGAACTACACAGATTATAGCTGCTACTATGCTTAGTCAGGGAAGAGCAAAAGAAGGCTCTCGGGTACTGACTTTCTATTTCCCTCAAGCCAGACCAGTTTAATCTGAAAACTCTAGCAGAATGAACTGGACTTCCATTTTCTCACATATGCCTGCCCTCCCCCTACACTCTATTATTATAATAGAGTTACCTTTTCTAGCAAAATAGAAGGTAAGGAGACGAATGCCTATCAATACTTCCTCCTCCCACACGCCCCCTTCTTTGAAGGGCTCTCAGCTCATTTGTTCAGGCCACGTCTCTTCTCCCCAAGACTCACTTAGTTTGGTGTCCGTCATCTTGAATATTCTTCAGTAGATACATCTTTGGGGCTCATGTTCTGGATTCTCAGTTGAAGGGAGGGAGCCAGACTCTACAGGTCTCTGCAGGCACTACAGGGACCCATAGGGTGCTGGCTGGGGGCCTCCTTGGCAGGCTGGGGAAGAGTGCAAGGCTCAGTGCACGAACCATAGGAAAGGCTCACAACCATAGGAAAGGCTAGCAACATCTTCCAGGCAGGACTATCCTAGAAATAAGTACATGTGAGACTTGAGAAACGGCTCAGAGTAGGTTTCTTCCACAGCTGTTTTAGGATTGGACATTTTAGACCAATCTTGTCCAGTATTTTTTCTGTCTTTTCTATTTTTCTGTTAAGCCAGCAAGCTGAGAATTGGGCCCTGCAGGGATCCATGTGGTAGGCAATAGCTGTTCTTTGGCCAAGGCCTTCATAAAGGATTCAGTCATCCCATTGACTGTTCCCTAGCCCCACCCCTAGATGAAGACCATGGTAAGGGAAGAATTTTGAGGTCAGTACAAACCAAATAAGTCTGTAAATTAAAGCTGTTAGTTTTCCTCTGAGAGGGCATTTTGCATCAGGCCTGGGCTATGTTCAGAATCAAACCTGAAAAAAAAAAAAAGAATCAAACCTGGCTGTGAGTTAGAAGAAGCACCGTTAAATTTTAGACCTAGAACACCCCAGGAAAAAGGTTTGTGTAGTGTGTCATAAAGGCCGTGAGTGTGTTTGGGCCACCTTACTACTTCTGGGCCAGCCTGACTGCTGCTGTGCACATTAGCACATACCTGAACCCCTCTGCTAAACTTAAGCCCTGCATCCCTACCTAGGTCAGATGTTCAGCCTCTGGGTTTGGGAAGAGAAAACTGCCGTGGCGAGAATCCTCAAGCCCTGGAGTTGGGTATTGGCTCTTTCAGCCAGTTTTTGTGGGACTTGCCTTTGGTTGGACCACTAAAGAAGCAAATAAGGTGTGAGGTTCCAGTTACCCAAGACAGCAGAGGTCCCTCAGAAACATCTTGGGTTCCCAGCTACAGACCCTCGGAAGGTGAATCAAACCTGTTTCCGCACTGGTTTTTCTCTCCAAATTTATTTTGCTTTTAAGAACTATAAACTCTAGCTATTGTTTTCCATGTTCTCAGGGCCCCTGGGTAGACAGACAAAGCTTGATGATTTCAGAGCAGATATAGGCCAAGAAACCATGGCATTGAGTGTGCTGAGTCCAGACAAATGATATTTATATACACATCCAAATTTGAAGAGAAAATGTATTTCTTTAGGTTTCAAACACTGTAATAGATATAAAGCAAAAATAAAAACCTGTTGCAAAGTTCTAAATAGTGTTCTTTGGAGTGATCCTAGACTGGATTTCTTGGAAGTCAGTGAAGTGAAGGTGTTTAAATTTATGGCCTAACAAGTGGAATTAAGAATTGTTAACAGCCTGCTTCTGCTACAAAGCATTTTTGAAATCAGCTTTATTGAAATATAACTGACATACAGTAAATGGCACATATTTAAAATGAACAATTTGTTAAGTGTTGATAAATCTACATCCATGAAACCATCACCACAATCAAGATAGTGAACATACCTATCACCACATGCCCCTTGGGAATCCCTCCTTTCTGCCTAAAGCTCAGCAACCACTGATGAGAGTTCCGTCTCACTATGGTTTAGTTTGCATTTTCTAGAGTTTCTCTAAGATTTTCACATCATTTCATCACTACTTCACAGCCCAGTGAGCCCAAAGTAGTTCATAAACTACTCACTTTGGTTTACATCAATTCCTAATGTAGCAATTAGACTAGCAGCCACAAAGTTGATACAACTCAAAAGGAAGGTTTTAGTTGGCTTGAGTGCATTTTACGTTTTAATTCATTGCCAACATTAAAAGATGCAGCTGTATTTAAAAATAGCTGGCACTTCCCTAGTGGTCCACTGGTAAAGAATCTGCCTTCCAATGCAGATTTGATCCCTGGTCCAGGAACTAAGATCCCACAGGCTGTAGGGCAACTAAGCCAGCAGGTCGCAAATAGAGTCCACGTGCCACAATTACTGAGACTGTGCTCTAGAGCCCCTGCTTGGCAACCAGTGTGCGCCGCAACTAGAGAGAAAAAAAAAGCCTCCCCACCCCCAAATATCTGGCACTCCTAGGCGTGAGTTTCTGCTTGAAGACAATCTGCAAGAGTTCTATTACTGTTTACCACCATTACCAGTGGGCTCTCTGGCAGATATTAATGTTGTTCCCATTTCCTCTTATAGCAAAGGAAAAAGTAACTTTTTAACCCATTTTTCTATCAAATTTTCTTATTCCTTGCCTGTCTGTTTTACTCATTACCTAGCAGGGCTTCCCTGAGAGCTCAGTTGGTAAAGAATCCACCTGCAATGCAGGAGACCCTGGTTTGATTCCTGAGTTGGTAAGATTCACTGGAGAAGGGATAGGATACCCACTCCAGTTTTATTGGGCTTCCCTTATGGCTCAGCTGGTTAAAAAAAAAAGCTGGCCCTCAATGCAGGGAGGGACCTGACTTCGATTCCTGGGTTGGGAAGATAATCTGAAGAAGGGAAAGGCTATCCTACCCACTGCAGTATTCTGGCCTGGAGAATCTGGCCATGGACTGTATAGTCCATGGGGTCGCAAAGAGTTGGACACAACTGAGCAACTTTCATAGCTGGCCCTTGGAGGCCACTGTTGACCCTTCTCCGTACATCACTCCTCTCACCCCATGCATACTTTGTTCTATTGTTTTTTATCTCTGCCTAGAACACCCTATTCTTAACGCAAATCCATCAAGGCCTGATTCATATGTTACCTCAAGAGATTTCCCACATGCTTTTCTGGAAATAATGAGGGCCTTGGTTTTTAGAGACCTGAATTCCAAACTTTTTTGAGCTTGAGTTCCACCTTTTACCATTATTTCAATACTGCCTCTCAATGTTACTTGGTAGACACTGCCTAAGGGGTGGGGAAGAGCATTGCTCTGAAGTCTCTCCAACTAGGGAAAAATATTTTAACATCTTAAGAGCTCTAATATACCCATCTGAATGCGGACTTCCAAAGAATAGCAAGGAGAGATGAGAAAGCCTTCCTCGGTGATGAATGCAAAGAAATAGAGAAAACAATAGAATGGGAAAGACTAGAGATCTCCTCAAGAAAATAAGAGATACCAAGGGAACATTTCATGCAAAGATGGACACAATAAAGGACAGAAACAGTATGGACCTAACAGAAGCAGAAGACTAGAAACGTGGCAAGATACACAGAAGAACTATACAAAAAAGATCTTAACAACCCAGATAACCTCGATGGTGTGATCACTCACCTAGAGCCAGACATCCTGGTATTCGAAGTCAAGTGGGCCTTAGGAAGCATCACTATGAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAACTATTTCAAATCCTTAAAAATGATGCCGTGAAAGTGCTGCACTCAATATGCCAGCAAAACTGGAAAACTCAGCAGTGACCACAGGACCG EMBV3_37132 GAGTCAATAAGCCATACCTTGCCTACAGCACAGACACAGCCACATCATGCTTTCAGCTGC Gene BVT0102_008581 + 0 NULL GK000016.2:53117303-53131204 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069588 TCONS_00069592 TCONS_00069590 TCONS_00069593 TCONS_00069587 TCONS_00069589 TCONS_00069591 1 XLOC_042010 Coding TCONS_00069591 XLOC_042010 Coding Coding DDI2 16:53124971-53168433 = TSS51862 9585 1 TCONS_00069591_7 616 10 0.779687535951773 0.00112481656668197 1.57620484887305e-10 0.000346180937183826 2.80594081514537e-06 0.000235595173158156 5.01970234684973e-26 0.000197532963056898 0.000109228605535719 9.61801834880529e-06 9.4380924173662e-08 0.000510381730974183 0.000143486937862403 0.000129486766735788 5.30273271458048e-09 2.03574759249424e-08 0.00746452020811111 0.00345603497436699 0.00238882798421517 8.46132546348981e-08 0.000260188172707063 1.97016016042279e-15 0.000722552686673276 0.00337602262996931 0.00327732412390132 0.000653174598976388 2.91707105144413e-09 1.25521341290734e-06 0.00163876632477629 0.000772101720768353 0.00196288215441546 XM_005194864.1 DDI2 PREDICTED: Bos taurus DNA-damage inducible 1 homolog 2 (S. cerevisiae) (DDI2), transcript variant X1, mRNA. 0.0 1.451e+04 99.99 0.839540949400104 XM_005246018.1 DDI2 PREDICTED: Homo sapiens DNA-damage inducible 1 homolog 2 (S. cerevisiae) (DDI2), transcript variant X2, mRNA. 0.0 4533 81.81 0.480125195618153 TCONS_00069591_7 sp|Q92681|RSCA1_HUMAN RSCA1_HUMAN Regulatory solute carrier protein family 1 member 1; 0.0 816 73.59 0.998376623376623 0 coding 0 0 0 0 0.00694307990018467 0.957189212140598 0.00717829613703073 0.891309251695394 CAGGCAGGCAGACGGAGTCGCAGGCGGGTGGTGGCGGCCGTGCTTGCTGGTGAGGGCGGGAGGGAGTGAGTCACTGAGCGTGTGTGAGGGAGGGAAGGAGCGAGCGAGCGGGCGGGCGAGCGAGCAACCCGCGCCGTCAGCCTGCAGCACCAGCCAGGCCCCGCCGCCGCCCCGTCGCTCCGCGCCGAGGCCGGGCCGAGCCGAGCTGGGTCGGGCCCGGGCCATGCTGCTCACCGTGTACTGTGTGCGGAGGGACCTCTCCGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTTTGAGCTGCACAACTTCCGCGCTCTGTGTGAGCTCGAGTCCGGCATTCCCGCGGCTGAGAGCCAGATTGTCTACGCTGAAAGGCCTCTCACAGACAACCACAGATCACTGGCATCTTACGGCTTAAAAGATGGCGACGTTGTGATTTTACGACAGAAGGAGAATGCAGACCCTCGACCTTCGGTGCAGTTCCCAAACTTACCCCGAATAGACTTCCGTAGCATAGCTGTGCCTGGCACGTCAAACACCCGGCAGCGCCAGCCACCAGGAGTGCAGCAGTCCCACTCAGCCCCTGGAGAAATAGCTTCATCTCCTCAGGGCTTGGACAATCCAGCCTTGCTCCGAGACATGTTGCTGGCCAACCCCCATGAGCTGTCCTTGCTGAAGGAACGCAATCCACCCTTGGCAGACGCTCTGCTCAGTGGAGATCTTGAGAGATTTTCTAGGGTCCTGGTGGAGCAGCAACAGGACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCTCTTTTCTGCGGACCCTTTTGATCTTGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAACAGAACATTGAGGAAAACATGACAATAGCCATGGAAGAGGCTCCAGAAAGTTTTGGCCAAGTAGTGATGCTTTATATTAACTGCAAAGTGAATGGACATCCTGTGAAAGCCTTTGTTGACTCAGGTGCCCAGATGACTATTATGAGCCAAGCTTGTGCAGAAAGGTGTAATATAATGAGGCTGGTAGACCGTCGGTGGGCAGGAATCGCCAAAGGAGTGGGCACTCAGAAGATCATTGGAAGGGTACATCTAGCTCAGGTTCAAATTGAAGGTGATTTCCTGGCATGTTCCTTCTCTATACTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGATATGCTGAAACGGCATCAGTGTTCCATTGACCTCAAGAAGAATGTACTCGTGATCGGCACCACAGGCTCGAAGACCACCTTCCTTCCCGAGGGGGAGTTACCAGAATGTGCCCGGTTGGCATATGGGGCTGGGCGAGATGAAGTACGGCCAGAGGAGATTGCAGACCAAGAACTGGCAGAAGCCCTTCAAAAATCTGTAGAGGATGCAGAGCGTCAGAAGCCATGATGCATGTAGTGTGTGTGTGCTGCAGCTGGAGTGGGCCCCAGACCAGAGAAAAGCGGTAAAGAAACTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGATTTAACCATCAAGCCCATCCTCCAGGACTGAGTCCTGAGATTGGTAATCCTCCAAGTCTTGCTCACTCTGTCTCTGCTTCAGTCAGCCCTATCCAGCCCAGTGACGCAGACAGCATTGAACCTAAAGCTGTGAAGGCTTTGAAGGCTTCAGCTGAACTCCAGATAACCTCTGAGCAGAAAGAACATCTTCCTCCACAGGATCTTTCTGATTGTGCTCCTTCAGCAGACAGTGCTCCAGCAAACCAGAGTCCAGCTATGCCTTTGCAGAATTCACTCGAAGAAGCCATTGTTGCAGATCATGTAGAGAAATCTGCTGAAAGAAGCACCCAGGGCCTCAAATCTCATCTCCACACAAGACAGGAAGCTAGTTTATCTGTCACAACTACTGGGATGCAAGAACCGCAGAGGCTTACGGGGGAGAAGGTTTGGCACCCAGAGTATCAGGACCCAAGTCAGGTGAGTGGCCTTCAGCAGCATGAAGAACCAAGGAATGAGCATGAGGTTATACAACAGAGTGCTTCACATGACCAAGACCATCCTTGTCACACAGGGGACCTTGAACTTCTTGGAGAAAGGCAACAAAGCAGTGCTGGTTTGGAAGCTGCAATGAAAGGAGACAGGCTGCAGCAGAACGTGGACCTTCCGGGTACAGGGAAAGATATTCTACCTTCAGGATGCCTTGGCTGCTCAAATTCAGAAACACTTATGGAAGTAGATATTGTCGAACAGTCCCTAGTTGCTGTGCCGAATTCAGGAGGTCAGAATACCAATGTCAAGAACAGTGGTGCATCTGATCTCATCTTAGATAATCCCTTGATGGAAGTAGAAACATCAAAATGTAACCCTTCCTCTGAAATTTCGAGTAATTCCATTTCTACTCAGGATTTACAGCTTCTAGAAAGTAATGTTGAAATGTCTGAAACGAGTAAAGAATGTGGGGATCACCCTTCCTCTTTAATAAGTCTCTGTGGCAGTTGTCAGCCCTCTGTAGAGTCATCAGAGGAATCTTGCTCATCCTTAACGGCAGCCTTGAAGGAACTTCATGAACTTCTGGTCATTAGTAGTAAACCAGCTTCAGAAAACACATCTGAAGAAGGATTCTGTCAATCAGAGACAGTAGTTGAGGGCCAAACAGGTATTAAGGACCTTTCTGAAAGATGGACCCAAAATGAGCATCTTACAGCAACCCAGAGTGAACAGTGTTCACAGGTCTCCTTTCATCAGGCCATATCTATAGCAGTGAAGACAGAAGAATTAACAGACACTTCAGCTGACACTGGAGTGGAAGATGGAGAAACTGTTAACTTGAGGGGTCCAGGTGATGGCCTGTTAACTGATAAGGAAGGTGTCCCCAAGTCCAAGGAGTCAGTAAACAAGAGTAGCTCTGTTACTGTAGCCTCAGCAGAAGCGTCTAATCAACTACATTGCACCTTAGGTGTAGAGATTTCACCCAGACTGTTAGCAGATGAGGAGGATACACTCAATCAGACTTCTGAGCAAACTGAGTCCTCATCACCCGCTTGCATCCTGGTTAAAGATTTGGGTCAGGGCACACAGAATCCAGTGACAGACAGGCCTGAGGCCAGGGAACATGTCTGTCCTGAAGCTGCAGGGCCACTTCTAGGACTTGAACCATCTACCAGCCATCCATCACCAAGTCCCTCCTTTCTTGCACCATTAATTTTTCCTGCTGCAGACATTGACCGGATTCTCCGTGCCGGCTTTACTTTGCAGGAAGCTCTTGGGGCTTTGCATCGAGTTGGTGGAAATGCAGACCTTGCACTTCTTGTCTTGCTAGCAAAGAACATTGTAGTTCCTACGTAACCATGGAAAAGTGGGCTAGACCATACTCTACTCCCTTTAAAAAAAAAGCTGTATATCTACACACACACATACACACACTCACCACATATACAGTATATGTAGAACCCTGCAAGCAGAATGTTGAGCCAGATTTTTTTTTTTTTTTTTTTAAGATTTTTTTTTCGGCCAAAGTAATTTATGATCTCTTGTCTGATGAATTTGTCTATCCTATTTGTTAAAATTTGGGCCTTTTTAAATGTATTGGCAGTATGTGCACACAGAAGCTTTTTATTATCATTAAGATGATGTATTCTGGAATAAAATTGATGGTTTTGTGTATAGCATACCCTTTTAGAATGAGAGTGAGTGCTTTAAAAAGCAGAAGCCATGAGAAAATCCCACCACCCATGCAGCTGAAAGCATGATGTGGCTGTGTCTGTGCTGTAGGCAAGGTATGGCTTATTGACTCATATTTTGGTTTATAAACTTGATCACATGGTTTCATGTTTGGAATGCATTATGATTCATCGGTTGTAACAGGAAATTGAAGAATAGTTGAAGAATATTTCCTGGAGTAGCATGTTTCCATTGGTGTGGTTAGGATTTGACATTTTAATGCGATGAGTTGGGAGGGCTTAAAACTTGGGCTGCTTCGTACATCACAGGCTACTGCATGGATTGCCAGATATCTTGGGTGGGATTTTGTGAGGGAATTAACATCAGAGTGTAACATGGTGCTACCCAGATTAAAAAAAGAAAGGAAAAACTGTAATTGCATTTGCCAATGTTGATAATGTTTCAACAACTGTTGTGAGTGAAATAATGCTCTAAACACTGGAATTTACTAGTGATTGGGTTTGGTAGCATCTCACTGATCACATCTCAACCCTTAATGACTTATGGTGAACTTATGTTCAGCTGATGGGTTGGTTGCCAGCAGTTTATTTCCTTTCCAAACTCATCTTCTAGCAAGTTCTTCTAAAGCTCAGTTTGAGCTGTGTTCTGAGTGAAATATTCAAGTGTAATAACCTTGTCACTGGTTCATCTTGGTGCTTGGAATGGTCTGTCTATTTGGTGAGTGTCTTTCATGGCAGTGGAAATAATAATTGGAGTTTCTGACTCAAGTGGCCTTGGTAGAGTTTTCCATCCCTTTCTTTCCTCAGGAGTTTCTTTTTTAAAGCAAGATTTGTCATATTTGTGTTTACCATGTCAAGATAGAGTGGGGCATAGTATATAGATGTATTTATTGTGGCCTTTTTTTATATGAGGACTAGCCCTTGGAAATCATTGTCCTGTGGGCCCCACTGTGCAATAATTCTACTGGGTAGATTTTAGATTTTTTTTTTTTCCTGAAAGATAAACTCTTATATACCTAGCAGGAATATGGAGTCCTGGTTTTATTGAAGAGAATTTTGAGAATGATAATTCCTGATTCCAGGTGATGATTTGCAATGTGTCTGAAACAGAAGCTTCAGAAGGGTGATTTGTGAACTTTTAATGTTAAGTGATTTTTGTCTAAAGTCTTACTCTCTTTGAGAGTTATTCTTTCCGTCAAAATTTACGTCATTGAGCACAATCAAAATGGAGGCTCATATCTCAGGAGTTTTTTAAATCTTAATTTGGGGGCACTTAGACATTGTTCTTCTTCTACCCTATTCCATCTTCTTTCTTTCTGCTGTGATGTATGTATGTGTATTAGGAGCTGTGAGTGATACGATGGAAAGTCCCATAGATTCCTCGTGATTCTCTGAAGTTCGGAAATGGTTGACAGAAAGAGCTGTTGCTTACTGTGTTCAGGGTGGCGCTCTAGACAAGTTAGCCAGATTGTCTTTAAAGTGTTCTTTTAGACAATCCTGTGCTGTAGACCCTTTTGCCTGCCCTACGCCAAAGATATAAGATGCACTAGGAACCTGCTAATAGGATTTCTGTCAACCGGCTCTTAGAGCTGTGACTGCAATTAAGTAGTGGTGCTATGATTGAAACAAAATTTAGTAGCCATGCAATGGGCCCCTGATTTGCTTTATGGGAATGACTGGGAATTTATTCTGAGCTTATCAATCTTTAGGGTTACAAAGTGGGGTGAGTGTAGGGTGGGAGGACTTATTGATGACAATAGACTCCTCCAAAAGGCCTTCTTTATAAAGAATGGCCTCTTAGTTTTCTGTACAAGCAGTTCCTCTGAACAATGCTCAGAGACATAACCACTGAATTTTCACACTGTGGAGATTTGGGGGTCAATCCCAGGTGGGCTATAGAATATCAATCCAGAAAAGGTTTCATTACAATAGCTTTTATTGTATGTATATGTATATTTATTTCTAGGAGAAAATTCAATAGGTAGGCCTATAGTTGTACACGTATTCTTATTAGGAATACTTTGGATGAGCTTAACCCATTTGCCAAATATCCCTGTCCTTCTTCATCATTTATTTTTCAACTTATAGTTGCTTTTGATTTTTTTTAAATCTTCTGTCCATTGTTTGTGTGAAAGTAAAAATTGTTGACATTGTCAGAATTTTGAATCATTTTTAAATTTAGCAATTCTAAAACACAAGGAATTAAGGAACATGGCATTAGTGAACCTTCATTGTCGATTTTTATGCAAAGTGCAGAAATGAGAGATTAACTTCTCCAAGAATAAGATAAAATCATTGTGAACTCCTGATTGCCAGCAGAACTGGTGAGGCCAGCCGTTACCAGTATGGGCTGCTTTGTTGGATAGCTCTTTTGTCATAATCAGTAATGGACAGCCTTGTGAACAGTGCTTACCTCCAAGAGTGGTGTCTATTTATTCACCAAAGAGAGGAGAAGATTTCCTTCCAAGTTGGTTCCTGTGTGTAAGAATGTGTTTGGTAACCAGACAGCTATAGGCTCTAGATTTTGCCATTGTCACTGGTAAGAATTATTTCCACTTGTACCTCTTTAGGCATCCAGACATGGTCTAATCCTTCATCTAAGCCTTCATCCCACCGTTTGCGCTTTATCCATTATCATAAAGATTATCAGTTGCTTAGCAAAGGGAACTAGATAGATGGTAAATGTGTGAGGAAACTGTTCTGCCTTGCAGCCTACAAAACTTTCCAGAGCTCCTTGTCCCAATGCATACTGAAGGGAGACACACACCATGTATTTTTTCCCAAAGGGTTTCTCCAGTAAGAGAGTTATATGAAAAGATATATGAGACTTTGTGTTACCGATTTTATGATAACCAGTTGAGGTGGAATCTGCCTGTTTTTCCCTTAGCACAGCTTTTCTATCTCTAGCAAAAGCCATAAAACTTTGGGTTGGTTTATAACCATTAACTCGTGTATATATACATGTGTGATAGATATCCTGCAGTTAATTTTGCATAGATTAAAAAGCAAACGTTTGTTAATCTTCAGATAACAGTCTTCGATTATGGTGAAGACTTTGATCCCACCATGTTTATAAAAAACAGCCTTGTAAGTCACTGGCCAGAAGAGTGGCAGTACATTCTGATTTCCTTTTCCTTTCGGTCTGTCACCTGCAGAGCATAAGCAGGGCACTTGAACTGCTACATGTTTCCAACTTGTTATCACTGGTAGCATATCATAAGAGAAGCTAACTAGATTATGCACCCTTTAGGACAAATACCAAAAAGGCAAATTTCTCCTTTGAATTTGGTGACTTAGTGTAGTCTGTGGCTGAACTAGAAACACAGTTCTCAAAGAGTTCCCCTTCTGAGAAAATTAAGGTTACCTTTCACATTAGGAGATCCATAAATTAAAATAGCTGCTTTCTTTCTGAAAGATTTAAACATGCCGATTTACAACAAGGTAAACTAAAAGCATGTCCTTGAGAACCAGAAATGTCAAATCATGGCTCAGGTTCCCCAGTAGTGTTCCCTCAATGGATGTTACTTGGGAGTTAATCATATAAATCATAGAACTTAAGGGAGGAACCTTTGATGTGCTTGATTTTCTCTTGTGCCTTAGTTTCTCCAAATAGCAGAGGCATCAAGTTCGAGTCGGTGCTAAAAGTCGAAGTATCATTGGGGTGGGGAAGGGTGGAGAATGTCTGAAAATGGCCCTCCTGGAGATAGGCATGTATGGAGTGTCCTAAGGGCTCACCTTTATTGTTGATTGAGTTATCCTGCACCAAATCATTTGATTTCCCCAGAAGGATTAGATTTCCATAGAAGTATTGTGACATGGCTTTTTTGCATCAGGCATACAAAAAGCAAAAATGGTTTCTATGTGTTTATTATGTTCTTTGTTGTGCTATCAGTATTACAGTAGTGAAAGCAGAAGTTTAAGAAAATCTGTTTGAACAATGAACTGTTAAACTCTCTCAGACTGCAGTTTGAATCTTTGAATAAGAATTTGTTATTCACTCATGAAACATTAAGTGACTGGTGAGCATTGAGGATAACAGCAGTACTGAAACAAACGGAACTGCCCTGTAAAGCTATCAGTCTCGTCAAGAGACATGAAATAAATCTTAGCTTCAAGTGCAAGATCTATTTTTGCCTATTAGCATCATTTATTTTAAAAGTCGTACTAGGATGATTGGGTTCAAATTCAGAGAAAACGGAAAAGCAGGCTCAAAATGGAATTAGAATCTGAGAACCTAGAACTGCTCTTAAAAATGTTTTTGAAAAAATGAGATTGGAGAAACCAACAAAAAATGTCCTAACATTTGGTAGAAATACTTGAAGAGATTAAGGACAGTTCAGTTTACACTGTTGGTGGAGGGGGAACAGGCAGGATAAAAGTGCAAGTAAATGGAAGATGACCTAACGAGTACCAGTGACAGTCAACTTTTCCTTCCATCACGACCTCCTTCCATGCAGGGTGGAAGTATAGACTGCTATGGCATCCTTCCTGCCGTCTTTGAGCCAGCTGCTCCGAAATACTAACCATCTGGGCCAACAAGACTTAGCAGAGAATTCTGGAAGATTTGCTGTTTTAAAGCAGTTGAGTGCAAAATGTGAAAATAGAACTCTACAGCAGAGAATGTAGCAAGCAATGGTTCTGGGACTAGATGAGGGGCAGAATTTATTTACAAGAAAATTCAGGCCTCTGCCAAACCTCTTCTGCAGGACAGCTCCATCAAAAGGACATTCTTGAGCCTATCACCATATATGTGGTAATCCTGAGGATACAGGTAGAATTTCTGAACCTTAACTACAGTGACTTCTGAAGCTTACAATTAGAATACCCTCGCAGGTTTGTCAGCTGCATACTGGTAATCTAGACCTTCTGGGGACTAAAATGAGCGGGTATAGCAGTTTTAGAGCACAGTCTTACGGAATGAAATCTACAGAGAAAGTTAATGCAAGGGTGTGGAAGATGGGAAATTTCCCTAAAATAAGGACACTTGGGGTGGGGATGTGGAATATGAAATTAGAGTAATTTTTACAGAATTATATTTCTCTTCATATATACCATAAAGAGGTCTTCATTAGCTGACTTGGGAAAGAGGTGTGCTGGTAGATTTTTTTCCTGGTAGGATACATAACAAATTATTTTGTTTACCAGGAGTTTGTTTCACATTCAGCCTTGAAGGATGCATCATTGGCTTAAAGGAAGGTAGACCTCTCTAGTTTCCTATATATTCAGATCAGTTCAGCATAGTTTGCTTTTTTTTAAACTGTGCACCTACAATGAACGTTGAATGCTCATTTATATTCAAAATTTCATTTCCATGTTAAGTTGGGCTAATGGCCTTTGCACTCAAAGTTTGTTTACCAGTTTTGTAGCCATATTTAGCAAATTTTAGCAAGTAGAAACCCCTTTTTCCCCTCTTATTTGTTCTTGGAATTGTTCTTTTATTGCTTTCCTGATTTTTCTTTAAGCTTTGAGACTACTGCATCTTACAAGAACTAGGCTGATTGGCAAAATAGGCTTGCCAATAGCTCTTTCACTCCCATAAGGCTTTGGTTTTGAGAGTTGGGAAAACTCTGAGAATTTAAGGGAACCAAACTCAGGAATCCCACAGTTGGTTGCATTGTGCCATTGGCTTAGGGGCTGGACACAGGACCTGTCTGCCACTGAGTGAGCCAGATGCATTTGGGTTTGAGTTGTTGTCACATACTGAAATGTAAGTCAGCCCTAAGTAATCAAAACACTTTTATTTTTCTTTTTTTATTAGGAACTTTCTGAAGAAAAAGTGATGTGTAAAACATTTGATATTTAAGACAATAAAGTTTTTATCATAAGACTCTTTTGTTTGATCAGTTTTCTTTTAAATTGATACGGTTGGTTACTTTTGTCCTTGTCTCTGTCTCCCAG EMBV3_13469 CATGAATCCTGGTAGCAGCTGTGCCCCCTGAAATGCTTTATTTCGGAGTAAGACAGTCCT Gene GeneID:100336395|LOC100336395:XM_002697261:2_cdna Constitutive 0 NULL GeneID:100336395 23 GENE LOC100336395 NULL hypothetical protein LOC100336395 EMBV3_27632 AGGAAGAGGAGGATCCAATGAACAAGCTCAAGGGCCAGAAGATAGTGTCCTGCCGAATCT Gene GeneID:615695|EIF3G:NM_001079623:96_cdna Constitutive 1 NULL GeneID:615695 7 GENE EIF3G EIF3S4 eukaryotic translation initiation factor 3, subunit G EMBV3_02806 CAGGGTCCGCCTTCTCAAACCCCACTACCTGGACCACATCATCCAGATCAGACAAGATAT Gene GeneID:524139|CBLL1:XM_002686778:90_cdna Constitutive 0 NULL GeneID:524139 4 GENE CBLL1 NULL Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 EMBV3_01691 ACATCCACATTCTCTTGGCTGACCTCTACCTTGTCATGCCGCCTATGCTCAATCCCCTCA Gene GeneID:521676|LOC521676:XM_002693413:97_cdna Constitutive 0 NULL GeneID:521676 15 GENE LOC521676 NULL similar to olfactory receptor 551 EMBV3_29644 AGAGAATCAGCCTAGGAGGAGATGGAAGTTTTCCCCTTGCTCTTGGTTTTGTCCGTCTGG Gene GeneID:100336621|LOC100336621:XM_002688163:54_cdna Constitutive 0 NULL GeneID:100336621 6 GENE LOC100336621 NULL glutamate receptor delta-2 subunit-like EMBV3_14569 GAAGCGGATGGACTCAGCACAAACCACTGGGTCTTATTCCAGGGAGAGATGGGCCTTCCC Variant GeneID:508132|NAGK:NM_001034314:8_cdna 164^814 4 EMBV3_03094 GeneID:508132 11 GENE NAGK MGC127109 N-acetylglucosamine kinase EMBV3_33901 AGGGGCTTATAAACTGGAGCACCTGACTTCCGTGAGGTTAATGATCAGAGCTGACTTCCC Gene GeneID:407131|CD80:XM_002684732:128_cdna Constitutive 0 NULL GeneID:407131 1 GENE CD80 NULL CD80 molecule EMBV3_17698 CAACTCAGTAGATACCAGAACCCCCGAGAAGCTGACCCCATGACTAAAGTGCAGGCTGAA Gene GeneID:507409|YKT6:NM_001035047:28_cdna Constitutive 0 NULL GeneID:507409 4 GENE YKT6 MGC128016 YKT6 v-SNARE homolog (S. cerevisiae) EMBV3_30818 ACCTCTGCTATCCAGACAGGACTCACCGAGATCGTACCGAGAAGCACTCCACGATGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36397 TGGGGTAAGGATGATGACCAAGGAGTAAGAGGTGAATAAGGCTGGAGCAGCATGCAGTCG Gene BVT0102_210433 - 1 EMBV3_04122 GK000002.2:127533981-127560952 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103861 1 XLOC_062236 NonCoding TCONS_00103861 XLOC_062236 NonCoding NonCoding - 2:127535554-127538074 - TSS77038 524 0.099236641221374 2 0.792774910678841 0 5.75292922429317e-05 0 1.58476844105136e-05 0 0 5.56460320527245e-05 0 0.000436667924633791 0 0 0 0 0 0 0 0 0 0.00154640376219339 0.000741102749656831 0.00130350551865614 0 0 0 0.000290889870315683 0.000161346686269429 0.00021245013570839 0 0 0 XR_230464.1 LOC101903355 PREDICTED: Bos taurus uncharacterized LOC101903355 (LOC101903355), 6e-152 540 100.00 0.568702290076336 0 noncoding GTCAATGGCAGGAAACCTGGCCTGTGAAGGAGGGGGAGGATGGGGCTGTTGTGTCTGACTCTTACACAACCCCCATCCTTTTGGTCTTAAAGGAGCATCCTGGTTGGGAAGAAGGGCAGGCAAGGGGCCTCCTTCTCAGCCCTGGACAGACACCGGGTTACGGAAAGAGGGGCCTTCAGAGTCAATGCAGGTCGCTGCCCTGGAGTGGCCCCCGATCTGACGAGGGACTTCATCTTCAGGACCCTGAGCCAGGACTGGAAGGAGGGAGGCCCCGACTGCATGCTGCTCCAGCCTTATTCACCTCCTACTCCTTGGTCATCATCCTTACCCCCATCTCCAGCATTCCACCTTCCACCACTGTTTTCACCTTTAGACTGAGCACCAGGAACAAAAAGCATCCAGTCTCCACTAAGGGAAATAGAGGAACATGTGGAAGGGAATCAGGGGCTTCTCCCAGAAAGCAATGACAGATCTATCCTCCTACTTCGACAATTACACCTTCATAAAGACACTCTGAAAAATGT TCONS_00106726 r 5' 1575 TCONS_00106726 r 5' 1575 EMBV3_12995 CAGTTCCGCACAGAGAATAATGGAGGACAGGAAAATCGACGGGACGAGAACGCCACGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30309 CATGTGCCTTCTGCACGCCTCCCTGTCCGAGGCGCTACTGGGCTGAGATCTCGGATACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22861 CTGGACAGCCAGGGCACTCCTGGTGGTGTGTACTTCTACCAAAAGACTCACAAAATTGCT Gene BVV0102_050127 + 0 NULL GK000017.2:61145867-62351359 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077698 1 XLOC_047122 NonCoding TCONS_00077698 XLOC_047122 NonCoding NonCoding - 17:62325164-62327165 - TSS57996 519 0.526011560693642 2 0.7415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000712451655166197 0.00201530471054772 4.83448455025399e-05 0 0 0 2.85960805215962e-05 3.53527880149393e-05 0.000226112452927121 0 0 0 0 0 0 XM_615197.6 CARD10 PREDICTED: Bos taurus caspase recruitment domain family, member 10 (CARD10), mRNA. 3e-10 69.8 76.53 0.175337186897881 0 noncoding 0 0 0 0 0.0280010826877125 0.88077267957262 -0.00321594200218993 0.951665994263855 ACATTCCCGGGAAGACAGAAGAAAGGAAGAAACAGGAAGGTCATGGAGGAGTGGCAGAAGACCAATGAGTAAACTTGACCCTGGTGCGTGGCTTGCAGGATCTCCCTGACCAGGGACTGAACTGTGCCCTCCTCCGTGGACGTGCAGAGCCCTAACCGCTGGACAGCCAGGGCACTCCTGGTGGTGTGTACTTCTACCAAAAGACTCACAAAATTGCTTGTATTTCTTCTTGGTTTGTGAGCAGCTGCTGAAGACCATTTTCGGCGTGGATCCATCATTTCTTTAAGGGTTTGCACAACAGTGATATTTCGTGTCTTTCATTTCATCTTCATTATGTGAAATACTCCCAAATTTCTCAAGAGGACACCACATCACTAAACGCTAAGGTTTGAGCAGACATCGTCCACTATCTACATTTTCACGCTTTTCAGTGATAAACCTCTTCGACTGAATTTGACATATGTTATATCACTGAACTGCACTCAACTGGAAATTAAAAGAGATAACCTTTGAAAACAA TCONS_00077690 TCONS_00077692 TCONS_00077697 s 5' 20863 TCONS_00077690 TCONS_00077692 TCONS_00077697 s 5' 21299 EMBV3_04664 GACCGGTAGTCGTCTCTGCAGTGACTCCAGCAGCACCGCTGTTTCTTGGTGTGCACAAAG Variant GeneID:516578|TBP:NM_001075742:8_cdna 87^228 2 EMBV3_27035 GeneID:516578 9 GENE TBP NULL TATA box binding protein EMBV3_08296 TCTCTGACCTCGCCATGCAAGTGATGACCTCCCCGTCCAAGAACTACATCCTCTCTGTGA Gene GeneID:281196|GLG1:XM_002694705:139_cdna Constitutive 0 NULL GeneID:281196 18 GENE GLG1 NULL Golgi apparatus protein 1 EMBV3_41629 TGACTCATCACAGTAACTCGCCCTGTTGGTTTCCCTTAGACGTGGCAGATGACAGGAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04021 TGCCTGCCTGAATTGGATGAAAAGTTATAGAGACAATCTTTTAAGAACAGTTGCTACTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05674 CCGTGATCGTTTCTAGCTTATGAAGTTGCGTGTAGTTATGAATAAGCATAGCTTAGGGTC Gene BVT0102_067405 + 0 NULL GK000002.2:73723488-73804849 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22868 GACATGCTGAAGTTCCATAAGTATACCATTGGCCACGCCTGGACGACTGATTATGGGTGC Gene GeneID:286818|PREP:NM_174772:2_cdna Constitutive 0 NULL GeneID:286818 9 GENE PREP MGC139175 prolyl endopeptidase EMBV3_13241 TTGCTGGAAGACGCTGGAACGCGCTCGGAGATAAACATGGAGGCACCTCCAGTCACCATG Variant GeneID:540695|MED18:NM_001076235:254_cdna 171^235 1 EMBV3_18136 GeneID:540695 2 GENE MED18 MGC142376 mediator complex subunit 18 EMBV3_18788 AGGGGAAGTACTGGGACTGGGGAATTCAAGTGTCTGAAGCCAATTCTCCCCACCTTCCCT Gene GeneID:786489|PCDHB5:XM_002689229:87_cdna Constitutive 0 NULL GeneID:786489 7 GENE PCDHB5 NULL protocadherin beta 5 EMBV3_00180 AGCAGCCTATGTTTTACCACCTTGGCCACTTCAGCAAGTTCATTCCTGAGGGCTCGCAGA Gene GeneID:537087|GBA:NM_001046421:183_cdna Constitutive 0 NULL GeneID:537087 3 GENE GBA MGC137522 glucosidase, beta, acid EMBV3_36685 CCACCATGACCTGTCCATCTTGGGTGGCCCTTACACAGCATGACTCATAGTTTCATTGAG Gene BVT0101_067357 - 1 EMBV3_39378 GK000006.2:14342392-14410554 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34698 CTTCTGCATCCTCCACCCACGTTAGCAACATCTAGAGGATTTAAAGGGAGACATGAAATG Gene GeneID:538541|TSPYL1:NM_001076111:28_cdna Constitutive 2 NULL GeneID:538541 9 GENE TSPYL1 NULL TSPY-like 1 EMBV3_16551 TGGATTCTGGGCAGTGTCCTTGTGGTATGGGAAAGAATACTGGGCTCTCACCTCCCCAAT Gene GeneID:520111|TRIM27:NM_001075799:28_cdna Constitutive 0 NULL GeneID:520111 23 GENE TRIM27 MGC139258 tripartite motif-containing 27 EMBV3_18454 TCTCAGAAGCCCCTCAGATTCCAGTGTCAGCAGCCCTCACACAAAAGAGGAAGCCTGGAA Gene GeneID:100335722|LOC100335722:XM_002687965:80_cdna Constitutive 0 NULL GeneID:100335722 5 GENE LOC100335722 NULL hypothetical protein LOC100335722 EMBV3_39633 GGAGTCATTCTTAGCAGTCCAGTCCACAGGCTAGAGTAGTTTGTCTCTTGTAACTGAACC Gene BVT0102_339730 + 1 EMBV3_19652 GK000008.2:24856904-24916218 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04508 GGTCACAGGCCAGGTAGAGAGCACAGAGGTCCATTCATCCAATCTCTTAGTCATGCAGAT Gene GeneID:531552|ACSS3:NM_001102137:9_cdna Constitutive 0 NULL GeneID:531552 5 GENE ACSS3 MGC165813 acyl-CoA synthetase short-chain family member 3 EMBV3_10626 GTGTGTTGCTCATCTGATATTCCAGCTCTAGGAGGTAGATGGGATAGGGGTTTCAGTTCC Gene BVV0102_306173 + 1 EMBV3_02427 GK000010.2:87051825-87110379 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27628 CTCCTACCTTCTTTCCCTGACCTTGTCCTCACCTTGATTCACCACCCACACTGCCTTTAT Gene BVT0102_340230 + 0 NULL GK000003.2:8234094-8249977 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171875 1 XLOC_103933 Coding TCONS_00171875 XLOC_103933 Coding Coding PCP4L1 3:8249491-8276731 j TSS128110 1961 2 TCONS_00171875_2 76 4 0.928154484379015 4.31395977992971e-05 4.1898005441534e-11 7.16655448874914e-05 3.53106836571455e-05 8.01758177008802e-11 8.97867653072814e-11 0.000347939646584052 5.18473858711843e-11 9.37801183277377e-11 9.23617341960317e-11 0.000328441721212961 1.13190624804974e-10 0 1.9211180255274e-10 1.93908778493082e-10 0.00144102823000529 0.00286772114064234 0.000789383923056511 0.000228858870666561 1.75982261975915e-10 7.29526735990032e-11 0.000383499456204376 0.00102193533625958 0.000406684298521437 1.79124718338379e-10 9.04858782912179e-05 9.13010364059117e-06 9.80817744178414e-05 2.89794084199479e-25 6.25710488991991e-05 NM_001110445.1 PCP4L1 Bos taurus Purkinje cell protein 4 like 1 (PCP4L1), mRNA. 0.0 2094 100.00 0.591534931157573 NM_001102566.1 PCP4L1 Homo sapiens Purkinje cell protein 4 like 1 (PCP4L1), mRNA. 0.0 816 76.60 0.580826109127996 TCONS_00171875_2 sp|A8R4Q8|PC4L1_BOVIN PC4L1_BOVIN Purkinje cell protein 4-like protein 1; 8e-41 132 100.00 0.868421052631579 0 coding 0 0 0 0 -0.08895814633331 0.521591130833959 0.0568333930761268 0.264214478842876 CTCCCGGCGCGGAGCTGAGCGCTTGGAGCTGGGGTGCGGGCACTAGAACAACGGCTCTCTGCACCGACTCTCCCCGCCTCATCAGCGGGGACCCTGCTTCAGAGCCCGGTAACTCGCTGCCATCGCCCGTGCAACCCGAGGGCCCTTTGTCTCCCCTGCACGTGCCGCGCCCCGCGCGCCCCGTCTGGTCGCAGAGATGAGCGAGGAAGGGGAAGTCCACAACTTTGAACAGCAGAGGAAACAAAAGTTACTCATGGGGAATTGGCAGCTACTGCCAAGATGATCGAATGGAACATTGGAACACGTCAGGCCCAGAGCTTAACACCAAAACATCTCCAGCAACCAACCAGGCACCTGGTCCTGAGGAAAAGGGGAAAGCTGGGAGTGCCAAGAAGACTGAGGATGAGGAGGAGGAGATTGACATTGATCTGACGGCACCAGAAACAGAGAAGGCTGCCCTTGCTATTCAGGGCAAGTTCCGGCGATTCCAGAAAAGGAAAAAGGATCCCAGCTCCTGAATAACCAGCTTACCCTCTCCTTACACTCTGCTCCCTTCCCTCTCCTTTTCCACAGCTCTGACTCCCCTGTGTCTTTGTCTCTTTGTTCCACTAGCCTCTCATAGAGGCAGGTTCAACCCTCGTACATTATTTATTCCAGCCCCTCAAGCCATTGTCATTGTACAGGCACAAGGAACATAGGCAAGATGAAGAATTTAATAGGCAGCCACTTGTCTAAGGGTGGACCATTTTCCCCTGGAGATACAGCCAGTATCTTGATCAGTACCTATGCCTTCCCTACGAGGTTGAAGAGCAAGAGGATTCGAGGTTGAGAGAGGGACCCCTGGTAATGTGGGAGGGAGGGGAATGCCTTCAGAGTAGGGTGCCCAGTGGTGGGGCATATACCCTGTTCCACTGGTTACAAACGTTTCACTTCAGTTAGCATCTTTTCCCCTTCACATCCTTCTCATCAGCACCTCAACTCCCCTCCTAGGAGCTAAGCCACAGTGGGAACTGGAGCCTCCCTTTCCCCTCGGCAGACCTAAATCAAGCTGCTTCCATGTTAGTGCATGCTGAGTAGATTAGCTCCAAGGATGGGAGACTGGGACAAGGAAAAATTTCCTTCATCGTGTTAGTCGAGAACCATAAGGGGCAGACATGGAAGAGGTTCAAGGGGCCACAGGCAGGGAAATGGGAAGGTTCAGGAGGGAAAGAAAAATGAAGGAGGAGGAGGTCCTTAAAGATACAAGTTACTGCTGGTAAAGGTGTACTATGTAAAGGATTCTTGGGGCTTTGCTAACCTGCCTACCTCTAACCCCTCACGTCTAGATAGCCTCAGAGGCCACACAAATCAAGTGACCCCTAGAGTTCCCACCTGCCTCGTGGTAGAGTCAGAGCAGAGTTGGAATAACCACTCTGTGTGATTTTAGCATGTGTAATAATTATGAGAACAATAAAAAGAAAAAACCCTCAAGTAGAGCCGTTTGACCTCTACTTCTATATTTTTCTCCGGAGGAGTATGAATGTAAGTCTGAGCTGGCCTCAGGGAGGTGGTGGAGCAACTGCACAGATGCCACGGTGGCTCAGGAAACTGATGCTGGCTGAGAATTTGCAGACTGGAGCCCCCTCCTACCTTCTTTCCCTGACCTTGTCCTCACCTTGATTCACCACCCACACTGCCTTTATCTGCTGCTGTTGCCACCCCCGGAGTGCACCTGCAAGGGTGCTTGCCTCCTTCTCTTTCCCCTCCCAGCTCAGTGTATGCTTGGTGCATCTGCCTCTGGAAACAACCCCATCGTCCTTGCTCCTTATCCCCGAATGACCTGTGCTAACCGTCCCTCCTTACCTCCCACTGTTTATCAAACTTAGGAGAAGAAGTAGATGAGTCTGGGTCAATAGAGAGCAGCACTGTCACCCCGAAGATGTTAAACTATGAATAAAATCATGGCTTACATTGCTGAGAAA EMBV3_35222 TTGTTCTGTGTGTGAGTTAACTAGCACTAACCCTCAGAAGGCTGGGAGGTGGGCGACTGA Gene GeneID:520296|LOC520296:XR_084612:419_cdna Constitutive 0 NULL GeneID:520296 18 PSEUDO LOC520296 NULL similar to Periaxin EMBV3_24559 GAGCAATTCAAGATACTCATTTCAGAAGCTCTTTAAGTAGATTCAGTGTGGGGCTGCTAA Gene GeneID:514749|RAD51:NM_001046179:154_cdna Constitutive 2 NULL GeneID:514749 10 GENE RAD51 MGC128559 RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) EMBV3_42850 GGAAAACGGAGTCAGTGAGGGCTTTCGGTTCTGGGTTTGTAGGTTAAGGACCACAGGACT Gene GeneID:534463|MFSD6:XM_002685219:102_cdna Constitutive 0 NULL GeneID:534463 2 GENE MFSD6 NULL major facilitator superfamily domain containing 6 EMBV3_40192 ATGGGCCCGAGTTGGGGGCAACATCCCGGGGAAATCATCGAGTTCCCCATCCTGAAGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43060 CCTGAAAAAGGCGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCC Gene BVT0102_313354 + 0 NULL GK000025.2:28174956-28212478 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04456 GGATCTTAGCTCCCCAACCAGAAATCAAACCCAAACACCCTGCATTGGAAATATGGAGTC Gene BVV0101_033219 - 1 EMBV3_43100 GK000016.2:48314478-49210970 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11868 CATCTTTGCTGATAAACCTCTGGTAGTTCAGAAAATTTCTATGATAAAACATCCTATACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39241 CCTTTAGACTCCTTGGGCATATGACAACTTCTCATTCCTTCTTTTTGATGACTTGACACT Gene BVV0101_054669 - 1 EMBV3_00909 GK000001.2:125740149-125862997 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32895 CATTCCTAGAAAACTATGGAAGGACTTACAAGAGCCGACGGTCCCAGATGCTGACGTTAG Gene GeneID:514142|HUS1:NM_001079592:40_cdna Constitutive 1 NULL GeneID:514142 4 GENE HUS1 NULL HUS1 checkpoint homolog (S. pombe) EMBV3_36169 ACTGGGTTCCAACTCAATATGTGGATGCAATCAAAGACACTGTGCTGGGGAAATGGCAGT Gene GeneID:100125938|UBFD1:NM_001105501:268_cdna Constitutive 1 NULL GeneID:100125938 25 GENE UBFD1 MGC165765 ubiquitin family domain containing 1 EMBV3_07265 GCAACAGAATTCTAGGAGCAGAGATTCATGGCTTTGAGCATTGACTTCTGAACTGCCTGC Gene GeneID:533114|CDKL2:NM_001103274:83_cdna Constitutive 0 NULL GeneID:533114 6 GENE CDKL2 MGC142906 cyclin-dependent kinase-like 2 (CDC2-related kinase) EMBV3_06556 CAAGTTAATTGGTGACCTCAGGCTATGAGGAACACGAGGACCAATCCCATAAGACTGGCT Gene BVT0102_105238 + 0 NULL GK000015.2:82375218-82375830 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062600 TCONS_00060336 TCONS_00060334 2 XLOC_037368 XLOC_036683 Coding TCONS_00062600 XLOC_037368 Coding Coding C15H11orf31 15:82374260-82377896 x TSS46370 3542 2 TCONS_00062600_2 324 2 0.0261348005502063 0.00125738437729799 0.00172244329747111 0.00160180820306549 0.0012200870340992 0.00133892623881848 0.000961653906098628 0.00148649601396558 0.00150270728573978 0.00212915607119349 0.00148019116825318 0.000165061394135966 0.000199545125212715 0.000354659787445439 0.00108669093436059 0.000852053612586579 0.00460560332154553 0.00165002598402898 0.00344249439109341 0.000850538686984235 0.00128724780884312 0.000289840264436874 0.00123349318743281 0.000839542233809941 0.00177199146581693 0.00114831169204172 0.000556325951609458 0.00108419827829695 0.000547156596781813 0.000850515898562034 0.00106693948426846 NM_001164092.1 C15H11orf31 Bos taurus chromosome 15 open reading frame, human C11orf31 (C15H11orf31), mRNA. 3e-90 338 100.00 0.0525127046866177 NM_001145101.1 BTBD18 Homo sapiens BTB (POZ) domain containing 18 (BTBD18), mRNA. 0.0 982 80.07 0.306324110671937 TCONS_00062600_2 sp|B2RXH4|BTBDI_HUMAN BTBDI_HUMAN BTB/POZ domain-containing protein 18; 1e-137 411 73.38 0.944444444444444 0 noncoding 0 0 0 0 -0.0464881147864565 0.692186270972152 0.0474229080612164 0.335724678412557 CTGCAGGTGAGGCAGTCCCAGCTCACTGCTGCATCCTGTCAGCCTGCAGCCCCTTCTTCACAGAGCGCCTGGAGCGGGAGAAGCCAGCCCAGGGTCGGAAGGTGGTGCTTGAGCTCGGGGGCCTGAAGATCAGGACCCTGAGGAAGCTGGTGGACTTCCTGTACACCTCCGAGATGGAATTATCTGGGGAAGAAGTCCAGGACGTGCTTTCCGCAGCCCGCCAGCTCCAAGTGTCTGAGCTCGAATCCCTTCAGCTAGAGGGTGGGAAGCTGGTGAAGGTCCCTCAGGGTCGAAGGCTGAACAGGGAGTGCCTGCAGCCTCCCAGCCCCGCGCCAATCTCTGCCAGGGTGGTGGCTTCCAGCCGGCGGCCTCGAGCCCCCCTGCCTGTCACCCAGGCGCCCTGTCCTCTCAGGGCAGCGAGACTGAAGTCCTTGGGGAAGGAGGAGGGGCCCCCAGAGAAGAACCACCAAGAGAACCCGGAGAACTCGTCTGGCGCTCTCCTACTCAAGAGGAAGGCCAGGGCCTGCCCAGCTCCACAAGAACCAAGTGCTTCACCATCGAGCCACAGTCAGGGACCCAAAGAGAACAGGAGTGACCCTGCCCTCGGTCCTATCTCACTCTCCCCACCCAGCTTGTACCCCTGCGTAGACGAGCGACTCCTGCCCAGAAAGATCAAGCTGAGCCGCTCAAAGCCGTCTCCCGATGTCTGCACATCCAAGCCTGCCAGCCTCCTCAGTGGAGCCAGCTCAGTGCCCACAGCCCCTGGCCGGCGTCTGTGGCGGCAGAAGAGTACAAATAAAGAAGCACCAGAGGACAAGCAGAAAACGGGGCGAGCTAGTCCCCTCAGGAGCAGCCCAAGTGCATCGGGTCTTGGGAAGACGGCTGGGAACAAGAAGTGGAGCCCCGAAGCCACGCATCCTCACCCAGACTCAGCAGAGGAGGAGCAGATTGGGAGAGTGAAGCTTCGAAAGATAGTCAACGGGACCTGCTGGGAAGTCGTTCAGGAGCCTCCCCTCAGAATCTCTCAAGATAGCCCTCAAATCCCAGAACTCAAAGACTCAGGAGAGCCTCTGGGGACACAGCCATCCTCAGCTCCCCAGAGCACCCAGTGGAGAAGTCCGAGTTTGGGTCCAGCCCAGAGCTGGTAGGAAAGGAACCTAGACTGGACATGGGCTGCAGAGAGTCCTACACATTCAACCCAGCCCTGCTTGGGCAGCCCTGCGAAGCTGAGGAGTACCGCATCACCAGTGCTGCCGCCACCAGCGAGCTGGAGGAGATCCTGGATTTCATGCTCTGCGGCTCCGACATTGAGCCGCCCATGGAGTCTCTGGAGAGTCCCCGGGCTGAGGGCTGCAGGACCCCGAGTTACCACCTGACAGAAACAGGCAAGACCTGGATCGAAGGGGAAGAATGGTGTTTGCCAGACGTGGAGCTCTGGCCCAGGGAGCTCACAGGACTGGAAAAGGAACCTCTTAGTGAGAACAAAGAGCCAGCTGAGCCCTTCAGCCCCCTAGTCCTGCCCTCTGAGAACAAAGAGCCAGCTGAGCCCTTCAGCCCCCTTGTCATGCCCTCCGAGGTAAGTGAGGGGGAGGTGTTTTCAGTGGGAGGCTCTTGGACTCCAGACCTGGAAATTAGCAGCTCCCAGCCACTGGAAGGTCAGAGAGACAAACTTCTCCAAATGGACTCCCTTGACCCTCCCCAAAAGTCCTGTGGAGACCTCTCGCCTCCCTGTTCAAACTGGGTGGACGCTGGCCTGGAAGTGTCCCTATCAATGGATGAGGTATTATACCCAGCTCCAGAGGCAGGCAAAGAGGGATCTGGCAACTCGGAGTGGGTGGGTCCACTTCCTGCCAGCCCTGAAGAGGAGATTGATGTAGACTCACTGTCAGAGGGGATTCTACCCATGGGTATTCTCTCCGTGTGGCCTGACCCTTCCTCAGAGTCAGAAACAGAGGTAGATATACTAACGTAGTGGCAAAGCGGGGAGGGCGGGCCACAGGGACTGGGAGGGAGGGACATGCTGGCTAAGAGGCCGCCAACAGGCCAGCATGTGTCCCTGTGCTCTCAGCACCAGAGGCAGGCACACCTGAAGCGCTCCTTCCCTCCCCAGGCTTTTGGAGCCAGGCAAAAGTCATTCCATAGATAGAAGATTATGAACTCGAATCCCCTTCTTTTATAATCTTGTCTTCCAGTTAGTGACAAGTGAAACAATAAACTCTGTGGTCACCAACTCTAGTGAGTCATAGGTGACAGCCAAAGCCAGTCTCCCCGATCAGCAGGCACCTGATCCCTAGTACCTGGTCTGTATGGCTTAGTCACTGCCGGCATGGGAAGTGTAGCCAAAGCTCCATGGGGCTGGGAAGATGTCCTGCACCATCACTTCTGAGAAGTGAGGTGAGAAAAATAGTTCCTTTTATTGCCTTTTCCCCCATAGTTTTTACAAGTGTTTCTCATGCTCTATTAAGGACCATAGGAGACCCAAGTTAATCGGTGACCTCAGGCTATGAGGAACACGAGGACCAATCCCATAAGACTGGCTTAGGGCACCCCTTCCCATATTAATAAATTTACTTCAGGACTCAGGCTTTATGTAAACTCAAATCCTTTAATTTTTATTAAACCAAATCCAAGAACTTTTCAATGTCTTACTAGAGGACTGCCTCACAACTGAACCCTCATTTCTGGAGGGGAGGAAACCACAGCTTCAGGGACATGACTGAAGTTTGGCCATGTCCCGTCATAAATGCTCCAACATCACCAGGGACAGAGGCTGTGAAAAGGAGAAAGGAAAAGAGTTAGAGAAGGGATCCAGGTAATCCTAGCCAGCCCTCCACCACTGGACACAGCTCAAGGGGTGTACACACACACCGCCCCCATCTCACTCAACATCAAGTGCCTGACAACATGCCAAAGCCCTGTCTGCAGCACTCGGACAAAGACAGGGTCGGGTTCTGTGCCCAGGAGTGCCGGCATCACCACGCAGGGCTGGCAGCATATGCTAACACAAGAGGCAGTAGGCATACCTGAAACTACACAGAGATTTGGCCAGGGAGAATCAACACACACACAAATGAGGGCATCGGTGGGTTTACAGGAAAGTGAGCTGTTTTTTTAGAAAACAGAAAATCGGCCCATACTCCAAGGGACACAGTTCTCTGCATCCTTTAAGGTCACAATTTGCATTCTCATAGTCATTTACATTACCAACGGCATTCCACGACTTAGCGCAGAGACACTGGAATGAAACATAAAGGGAGCAAAGGGCACACTGAATAGGAAATTTTTTTAGGGGGGGGTGGGGCGACTTTCAATTTCCCACCAGGAAAAAGGGGAAGAGGTATTCCCACTAGAGGAAAGCCCGAGAGCAGAAGCGAGTCATGGAGAACCTACGTCCTGTGTGAAATCGGGGATCGGGGGTTTAACAGGAAGGGCTGCTTCGCCAGCAGCCGCACGAAGATCAGCCCCACTCCCCGCCATTCGCCATCTCGAACCTCAGCGAGACGCCTTCTGCCCCACCTCCCTACGAAAGGTACTTCTTCAGC TCONS_00060336 TCONS_00060336 r 5' 0 TCONS_00060336 TCONS_00060336 r 5' 0 EMBV3_04925 CTTTCCCACCTCCCCAGCCTCAATCAGTTTCTTGTTGGTAGATTTGTGCGGGTGTTTACC Gene BVT0102_238646 - 1 EMBV3_23705 GK000007.2:3444391-3471038 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06644 GCAAAGCATCCTACTCTTGGCGAGCACCTTCATGTGTTTCCACACCCTGTCCTGCATCTT Gene GeneID:787095|BOSTAUV1R419:XM_002695274:31_cdna Constitutive 0 NULL GeneID:787095 18 GENE BOSTAUV1R419 NULL vomeronasal 1 receptor bosTauV1R419 EMBV3_22707 CTCAGCATCTCAGCATCTAGCCATGAGAGCTTTGAACTGTGTCTGTGGGCATCTGTGCTT Gene BVT0102_043443 - 1 EMBV3_18102 GK000023.2:40790974-41076274 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135203 1 XLOC_081658 NonCoding TCONS_00135203 XLOC_081658 NonCoding NonCoding - 23:40860718-40864936 - TSS100637 965 1 TCONS_00135203_1 73 0.212435233160622 2 0.771638605643823 5.63966305607808e-05 3.12385676774752e-05 0.000249328580507617 1.63510699748224e-11 0 3.70679563935012e-06 0 0 3.2705223187113e-05 0 0 0 0 0 0 0.000136847864005288 0 0 1.92851547321713e-05 0 0 0 0 0 0.000158131232951242 7.30099835520511e-05 0 0 0 0 XR_238277.1 VPS4A PREDICTED: Bos taurus vacuolar protein sorting 4 homolog A (S. cerevisiae) (VPS4A), transcript variant X6, misc_RNA. 2e-23 114 77.55 0.144041450777202 0 noncoding 0 0 0 0 -0.0818356716663723 0.561880872502934 0.0205062682125417 0.663424373409057 GCCAAGCTCCTTCTCCAGGCTCAGCATCTCAGCATCTAGCCATGAGAGCTTTGAACTGTGTCTGTGGGCATCTGTGCTTTATCTCCTCTTACTTTTGGCATCTGTTAGCAAGACGTGTCCTAAGGTAACCGCTTCTTCACTTTACACCACTTCGGTTTCTGTTAAAAGGTTTAATGGGGGTGCCCAACTTTCAGATGGTGGGGAAATATGTTATCTCTTTGCAGACCAGTCATTCATCTCTATCTTTCTCTGAAAAACAAAATCGGGGCCCCATTTGTTGCTTTCTAACTCTGCTTCCCGCTGACCCGTGGCTCTTCTCCGCACTCATCTACAGTTCACCACTCTGCTTTTCAACTAAAGCAATTCTATTTCTCTTTGTTTTAATTATTTGTTGATTCACCTAAGATTTGGTCTGATTTCTGAGCAAAAAATCATTTGAAAATATCCAGAAGAGATTCTTTTAAGGTTCCTTCCAGAACTAAGACTTCTTGAATCGATGAAATGCAGGCTCTGGTCAGGAATGCAGACCTGTTAGTCAATCCTTAAATTATCTCAGCCTGGAGCTGCCTCTCTCTCTGTACATTAGGCCAGAAACACAGACCTTCTTTATTTTTTTCCAGAACATAAAGTTGAACTGTACAGGCTGTGATGGAGGTAAATGAGAAAGACCAACACATGTGTGTCAGGAAACAAGGGGCAACGTGGATGGCTGGCGGAAAGCGGGATTCTTCCTCCCCTGTTTCTTCAAACGGCCACTAGGTGAATAGTGAGAGAGAACTCTCCTACTTCCTTGCCTTGGTTCTGCACTCATGAAGTCTGGTTATGAGTGGACAGCACCAAATATTAATTGCTCTTTCAAAGTATATAGAACATCTTGGAAGACAGCCCTCCAAACTGTAAAAGTGTTGGTTTGCAGCTTCCATCATAGCTGGATCTTCTAAAGGCCATCCTACCATTTTTAAGGT TCONS_00135197 s 5' 69569 TCONS_00135197 s 5' 69774 EMBV3_07382 ACATGTCCTCTGTGGCTTCCAGCATCAAAGGAACAGTTGATACCCCATCTCTGCAAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07515 ACATGGGACAATCAAAACCTGACTGAGCTCCCCCATTTCCCTCGGGTGAGGATGACTGTT Gene GeneID:524002|SEMA4G:NM_001101117:162_cdna Constitutive 0 NULL GeneID:524002 26 GENE SEMA4G NULL sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G EMBV3_15157 TGGGAGCACAACATACTGGATTCTAGGCCTGGTTCTGCCATCAGCTTGCGTATGAGTTGG Gene BVV0102_092974 + 0 NULL GK000001.2:112008223-112013081 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43109 CAAGCCCACTGCCAGGCCTCAGTTTCTGCCTCTGGAATACAACCATGAAGATGGACAGTT Gene GeneID:507471|LOC507471:XR_083583:49_cdna Constitutive 0 NULL GeneID:507471 1 PSEUDO LOC507471 NULL similar to CG32262 CG32262-PA EMBV3_16192 TTCCAGACACTTTGCAACACCATGTGCTGGCCTTAAACTGAAGTCTGAACATCGCCCGCC Gene BVV0102_279324 - 1 EMBV3_37480 GK000010.2:7502909-7562213 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34825 TGTGTGCAGAGCATCCCACCACAGCATGGCTCTCTCATGGCATCAGAGGAGCTGCCACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28685 AGAGGATACCAAGTGAGCTGAGAACAGAATGAAGTCAGAGAAGGGCTGTGAGGTGTCTGG Gene BVT0102_151626 + 0 NULL GK000027.2:37437164-37444199 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158396 1 XLOC_096850 NonCoding TCONS_00158396 XLOC_096850 NonCoding NonCoding - 27:37442711-37443648 - TSS118721 937 2 TCONS_00158396_1 66 0.471718249733191 1 0 0 0 0 8.86248208347298e-06 0 0 3.73428099747342e-05 0 0 0 0 0 0 0 0 0.000310061500160035 0 0 0.00152296200559798 0.000752144886229398 3.23984191332666e-05 0 0 3.57836239183743e-05 0.00011091475053949 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0596859393190287 0.634812054887324 0.0773147525460524 0.332449038144601 CAGAAGGTTTTTGCCCTTAGGACAAACTCTTTGGTTCATGGGGTTCACCTTCTAATGCCATGGAAGCAGATAAACACATAATGTCAGGTAGAGACAAGTAGAAGAAAACAAGGCAGATAGAGCAGGAGACAGAGACAATGTTATAGTTTTAGGTAGGGCTATTGGGAAGGGCCTCCTTGAAGAGGATACCAAGTGAGCTGAGAACAGAATGAAGTCAGAGAAGGGCTGTGAGGTGTCTGGGGGAAGGACATTCCAGGTAGAGGGACCAGCCATGCCCAGCCCTGAGACAGGAATTCCAGCTTCCCCCCAGGGCACAGAGGATTTTAACGGAGCTGAGTCCTGGAAGAGGAATCAGAAGGCACATCCACCCAGTGGGCACTATGGCCCGTCTGGTTGTGTGGGACCATAGAGGCTGTTGGACGGCAAGTTGGCAATGGTCTTGTTGTGCCACTTAAGACACCAGCATCCACTGACTGCCGGGATTTTGAGCCGTGGGGCGGGGCAGGGAGGAAAAAAAGTATCACTCAACTTCCTTACCTTGCAGCATAGAGGCTTGTTTTCTCAGAGAAAAGCCATGTGATTGACCTTCATGAGATGGTTCGTGACCATGACCTTCCTGAAAGTTATTCTCCACCCTAAAACAGCTTGGTATTGTCCTTAAGAAGCCCTAAACTCAACTCTATCGTCAGGCTTACCTCCTGTCTCCTTCCCCCTGACAGAATTCTGTTTCTATCACACTGAGTCTCTTCCAGTTCCTGCACTGAGCCATGCTTTCTCGGAGCCTTTGTACCTGCTGTTAGGATTGCCCTCCTCTCTTCCTATGGCTCACATCCCTCAGGACTCCGTTTAAATGTCAGTTCTCCCGGTAGCCTTCCCAGACTAGCTTAGGTGCCTCCATCAAATGCTGCCTAAGCATTTCGTCCTATGAACATAGCAC TCONS_00155632 . 5' 235 TCONS_00155632 . 5' 235 EMBV3_26801 ATGTTGGGTCACAAGAAGCAAGATGGCAAGGCGCATGCTAAGACGAAAAGTCGCTCTTCC Gene GeneID:787441|LOC787441:XM_002697535:287_cdna Constitutive 0 NULL GeneID:787441 23 GENE LOC787441 NULL similar to histone cluster 1, H2aa EMBV3_28893 TCTTCAGAAACCGGTTTGAAGTTAGGAACGGTTCCCCAGGAGGCACTAAGGAGAACCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03983 GACAGTCTGCCAGTATAATTGTTGCCTAGGTAGAGATGGATTCCATGTTCTTCCTACTCC Gene BVV0102_319757 - 1 EMBV3_12191 GK000011.2:94092094-94102997 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025936 TCONS_00025937 1 XLOC_014885 Coding TCONS_00025936 XLOC_014885 Coding Coding RABGAP1 11:94092978-94265148 j TSS18719 6162 1 TCONS_00025936_5 1069 0.0245050308341448 27 0.964366407425262 2.32874240613657e-31 2.40668479206612e-33 0.000119387051593662 0.000251780240198916 6.72432715033194e-28 0.000341122890645592 0.000158574679762867 0.00199285698701991 2.47309026428981e-05 0.000110070362351451 9.23197444629281e-06 4.34568086973691e-05 8.57112848685714e-06 8.56443272291478e-05 2.33266742133135e-27 0.00348378575818549 3.62196232109273e-69 1.00325441694116e-34 1.5635696351932e-17 8.35873631699013e-05 5.86942610991525e-05 0.000136585464727715 0.000854860582434187 0.000608658365361951 2.21760234510255e-109 1.70735782314526e-72 0.000112485806460633 6.28222440852663e-09 0.000136908024336706 0.00032945940030837 XM_005213132.1 RABGAP1 PREDICTED: Bos taurus RAB GTPase activating protein 1 (RABGAP1), 0.0 9458 100.00 0.850860110353781 NM_012197.3 RABGAP1 Homo sapiens RAB GTPase activating protein 1 (RABGAP1), mRNA. 0.0 6435 89.17 0.789678675754625 TCONS_00025936_5 sp|Q9Y3P9|RBGP1_HUMAN RBGP1_HUMAN Rab GTPase-activating protein 1; 0.0 2180 98.32 0.999064546304958 3 coding 0 0 0 0 0.00280004251425059 0.981803255217973 -0.00348679265034313 0.950089306778974 GGCGGGCCAGGAGAGGGATTCTCCGTGCCGTGGGCGAGATGATCGGGTACCCCGGGCTCCCGCTAGCTTCTCCGCCCGCGTGAGCCGACGAGCAAGTGCTGTGGCTTCTTAGCGCCTGGGGCTCAGGCCCCGCGCACTTCGCTCCTTCTCAGCCGCTCCTCTCTAGCTACGACTCGGCCGTCTGCCGTCTGCGTGGGCCTGAAAGGCGCAGCTGCACTTAAAGCGTCGATGGAGTAGGAAGAACATGGAATCCATCTCTACCTAGGCAACAATTATACTGGCAGACTGTCTGAAGTAACTATTTCGGAACTCTGGAATCTATTTGAATGCTTGCATGTTCCAGGGGAAAATCTGGTTGGTCATCTGAGGTTAATTTCAGTCAAGGCATTTTTAAAATATTTAATCATTCATGAGTTGAGCTTCATTCTTGAGTCATGGATGACAAGGCTTCTGTTGGAAAAATCAGTGTCTCCTCAGACTCTGTGTCTACTCTTAATAGTGAAGATTTTGTCTTGGTTTCCAGGCAAGGAGATGAGACACCATCTACAAATAATGGAAGTGATGATGAGAAAACAGGACTCAAGATTATAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTGCTGATGGATCCTCCAATGGACGACCAGCCAGGGGACAAGGAGCTTGTGGAAAGGTCACAGCTGGATGGCGAAGGAGATGGGCCTCTTTCTAATCAACTCTCAGCTTCATCCACCATTAACCCTGTGTCATTAGTAGGGCTCCAGAAACCAGAGATGAGCCTGCCAGTGAAACCTGGACAAGGAGATTCTGAAGGGTCAAGTCCTTTCACACCAGTGGCAGATGAGGACAGTGTAGTTTTCAGCAAACTAACTTATTTAGGCTGTGCCTCAGTAAATGCTCCCAGGAGTGAAGTGGAAGCCTTGAGGATGATGTCCATCTTAAGGGGCCAGTGTCAGATCTCACTAGATGTAACCCTGTCAGTGCCGAATGTATCTGAAGGAACTGTGAGACTCTTAGATCCTCAGACAAACACTGAAATAGCAAACTACCCTATCTACAAAATCCTTTTCTGTGTCAGAGGGCATGATGGAACTCCTGAGAGTGACTGTTTTGCTTTCACTGAAAGTCATTACAATGCAGAGCTCTTCAGAATACATGTCTTTCGGTGTGAAATACAAGAAGCTGTGAGCCGGATACTTTACAGTTTTGCCACTGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTTCAGCAACTGCTGCGCCTCAGACTCCAGACAGTGACATCTTTACCTTCTCTGTGTCTCTAGAAATAAAAGAAGATGATGGTAAAGGTTATTTTAGCGCAGTTCCTAAAGATAAAGACAGACAATGCTTTAAACTCCGACAAGGAATTGATAAGAAGATTGTCATCTATGTGCAACAAACAACTAATAAAGAACTTGCCATTGAAAGATGTTTTGGTCTTCTCCTTAGCCCAGGGAAAGATGTACGAAATAGTGACATGCACTTGTTAGATTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCCTATGTTATTACTGGGAGCTGGAATCCAAAATCCCCACATTTTCAAGTTGTAAATGAAGAAACTCCTAAAGATAAAGTGCTGTTTATGACCACAGCTGTTGATTTGGTAATAACAGAAGTACAAGAGCCTGTTCGCTTTCTTCTAGAGACAAAAGTCCGAGTTTGCTCACCTAATGAAAGATTATTCTGGCCCTTCAGCAAACGTAGTACTACTGAAAATTTCTTTTTGAAACTAAAACAGATAAAGCAAAAGGAGAGAAAGAACAATACTGACACTTTATACGAAGTTGTATGCTTGGAAAGTGAATCAGAGAGAGAGAGGAGGAAAACTACAGCCAGTCCCTCCATTCGCCTGCCACAGTCAGGATCTCAGAGTTCAATGATACCTTCTCCTCCAGAAGATGATGAAGAGGAAGATAACGATGAGCCTCTCTTGAGTGGATCTGGTGATGTATCCAAAGAATGTGCAGAAAAAATTCTTGAAACATGGGGAGAACTGCTGTCTAAATGGCATCTCAACTTGAGCGTGAGGCCAAAGCAGTTGTCATCCTTAGTAAGAAGCGGTGTTCCTGAAGCTCTTCGAGGAGAAGTCTGGCAGCTCCTAGCAGGTTGTCACAACAATGACCACCTGGTAGAAAAATACCGAATTCTCATCACTAAGGAGTCTCCCCAGGACAGTGCTATCACTCGTGATATTAACCGGACATTCCCAGCCCATGACTACTTTAAGGACACAGGAGGAGATGGACAAGATTCTTTATATAAAATATGCAAGGCTTATTCTGTGTATGATGAAGAGATTGGCTATTGCCAAGGCCAGTCATTTCTCGCTGCTGTTCTGCTTCTCCATATGCCTGAGGAACAAGCATTCAGTGTTCTGGTCAAGATCATGTTTGACTATGGTCTCAGGGAACTTTTCAAACAAAACTTTGAAGATTTGCATTGCAAATTTTACCAGTTGGAGCGCCTCATGCAGGAGTACATCCCTGACCTGTACAACCACTTCCTGGACATAAGCCTTGAAGCGCACATGTATGCCTCCCAGTGGTTTCTTACGCTCTTCACTGCGAAGTTCCCTCTGTACATGGTCTTCCATATCATCGACCTGCTTTTATGTGAGGGAATAAGTGTTATATTTAACGTCGCCCTTGGGTTATTAAAGACTTCCAAAGATGACTTGCTACTGACAGACTTTGAAGGTGCCCTGAAATTCTTCAGGGTTCAGCTTCCTAAGAGATACCGCTCAGAAGAAAATGCAAAAAAACTAATGGAACTAGCTTGCAACATGAAGATTAGTCAGAAGAAGTTGAAAAAATACGAAAAAGAGTATCACACCATGAGGGAACAGCAGGCCCAACAAGAAGACCCCATCGAGCGATTTGAGCGAGAGAATAGGCGCCTACAAGAAGCTAACATGAGGTTGGAACAGGAAAATGATGACTTAGCCCATGAGCTGGTGACCAGCAAGATTGCACTGCGAAAAGACCTGGATAACGCTGAGGAAAAGGCAGATGCACTGAACAAGGAGCTGCTTATGACCAAACAAAAGTTGATTGACGCAGAGGAAGAGAAAAGAAGGCTGGAAGAAGAGTCTGCTCAGTTAAAAGAAATGTGCCGTCGGGAACTGGACAAGGCAGAATCCGAGATTAAAAAAAACAGCTCTATCATTGGCGACTACAAGCAGATTTGCTCTCAGTTGAGTGAAAGATTGGAGAAGCAGCAGGCTGCTAATAAAGTGGAGATTGAGAAAATTCGGCAAAAAGTAGATGACTGTGAACGCTGCCGGGAATTTTTCAACAAAGAAGGGCGCATAAAGGGCATGGGCTCAGCTAAGGAAGTTGTGGATGAGGATACAGATGAGGAGAAGGAAACACTCAAGAACCAGCTGAGAGAGATGGAGCTGGAACTGGCACAGACCAAGCTGCAGCTGGTGGAAGCGGAGTGTAAGATCCAGGACTTGGAGCACCATTTAGGCCTTGCCCTCAACGAGGTCCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGCTCCATAAAGACAGCAACTGGGGTTCAAGGGAAAGAGACTTGCTGAGAGCAGCTGCTGCCTCCAGACCCTTCGGAAAACATGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACATGCCCCAGGACAGAATGTCCGCAAGTCAGATCCATAGAAGCCTGTCGGGAGGTCACTGTGGACCAGAGCTCGTGAGGCCCTCCTCACTGCTGATACTAACAGGCCCGCTGACTCGCCTGCCGCTCTGGACACTCCGAACGTCACTCCTCCATGTGACCTCCGGCCTCTTCCCAGTTAGGTCAGCTCATATCCAGCCCAGCATCCGAGTTGACGTTATCAGAGTTTGGGGATCTTCAGGCTGTTGGTTTTTTTCTAAACCTTTAATTTTTTTTTAAAATACACACACACATACAAATATATATATATATATAAATATATATATATATAGGGGGACGTAGAGCAGGGGATCAGTAACTCAAGTACCTGCTCCAGTGCCAGCAGAGGGTCCTCTGTGTAGACATGGAGAAGCACTTTGTTTAAATAGGAGGGTTTCATGCTTGTAGTTGAAGCCACCTAGTTTTGTTAAACTCTACAATGCACAGGTTTTGGTTCGGCATCACTCACGTTTCTGATCAATTCTATGCAACTCTCATAGTTTCTGTTGTTCTTATTGTTAGCTGCCAAATGACTCCACAGCGCTGGGGCGGGTGACTTGACCGACTGTGAGACTGGGTTAATCGTAACATGGACAAATCTTATTTTGCTTCATGTGTCTGTGTGTGTGTGTGTGTGTGTATAGATATCTTTTTCCCAATGCACCCAACTGACAGTGTTTAAATCCCAGACTAGGACTGATCTGCACAAGTTAATTACGTGGTTATTTGGGCACTTACTGCATTCAAGGTTTGTCGGGCTCTGCTCTCTACCCTGCTGGTGTGAGAGCTGTGAAGAGCACCTTCACTTCAAGGTTCCTAGTGTTTCTGCACAACAGGTTGTACAAGTGAGAAAGACTTTGAGTTCTGTATGTGTGTGAGAGAGAGAGTGTGAATGTAAGGCTGTGCAGACACATGCCAAGAGGCCCACGTCCTGCTGGCCTGTGTCCCCGCCTGCCTGGGCCCTCCCTGGGGTGAGGCCAGTGCAAGCCTTGCTCTTCGGATGGGCTGCAGGTTCTCACTTCAAAACTATAGAATGGGGGTTTTAGCACCTTTTTTAAAAAAATAACTTTAGACTTTTAATTTATATAGTGGTAACGCTGACAGGCTGTCTCGCAGATGATTCTGCCGTCTTCTGTGCGTGCAGTGTGGAGTAGCTGGTTACAAGAGGCACTGGTTTGTATATAAAGAGACTTGGGTGGTTTTGTATCTCTTTTTTCCTGTTGGCTGTATTAACACTTGCTGAAGTCATCTGTGATAAGGGAGGTAACAAGCGGCAACCCCTGATCCCCCCAGACCATCCCCTCCACTGCTGTCTGTGTCCTTGTTCAGTTACCAAAACAGCTATGCGCCCATCTAAAACTAGGTGTGTGGACATTGTGCTAGGGTAGTTTCAGTGTGTCAACTTTATGAATTGAAATATAAACCAGTAAAATTGTATTACTGTTTCTTTTGTTGGTTTTATTTTAACAGCATATTCATTAAATATTTTGGTACAAACAGCATCACTTTGTAAAAACCAGTTTTATCATTACGTGCTCTTGCCCACTTCCTCCCCCGCTCCCGCTCTGGGCTGAGATGCGTGTGAGCAGCCATGCATGCCAGGCCCGTGGCGGGTGGCGGGGTTGGGGGAGAAGACACAGGCTTTGTTCCCCGGGGGCTGCTGCCGGCACCTTCCTCGTGAGCACTGTCCGTCCTGGAGAAACGAAGTGCTATGGTGATGGGTGAGATGTGACTCGTGTGCTACAGGTTTAGGGAAGTCTTAATGGAGGTGAGCGAGTGGTAAGACCTTGAAAGACAAAAGCATCTTACCAGGCCGAGATGGAAGAGGGCACTGCGGGCCCCAGATGTGCACATGCAGGGCAAGCGGCCGAGGGGCAGAAGTGGTCAGTACCCAGACTCTCTGGGAAGAGTGCTCCTTCCGACCACTGCTGGTCTTCCTACGCTGCAGCCCCCCAGGAGGAGGCTCCCAGACGGGCCGTCCTTCACCACCTCACCCACTTCTCTGCAGCAGGAAGAAGAGAGCAGTGCTCCCCGCACCCGACGGCCCCTGCTTGCTTGACCTGCCCTCCACGACCCCGACACCAGTCTCTGGATGAAGCAGGCTGAGCTGCAGGCCCCGGAGAAGGGAAGGCGGTGAGTGAGCCCTGCCCCGTCTTCTCTCCACAGCCCAGATGCAGGCCTGGTACCTGGCAAGTGGCCGGGCTGTGACAGGAGCTCTGCGAAGGCCGGCACAGGGACTCTGGAGGACAGGTGGGATCCCTTTGCTGCTCAAGGCCAGAGGGCACGTTTCTGGGGTCCATGTTCCCGGCCAACCAGGTCGAGAGTCCAGAAGGGCTGGCCTGCCCCTGGCTTTTCCCTGCCCCAGAGTCACAGTGTGAGGAGGATAGGGGCTTGCAGAAATC EMBV3_39268 CCAGGTCCCGAGGACAAGTTACATGGACAGCCTGTACAGATTCGACTGGGACCACTGCGG Variant GeneID:539750|FOLR1:XM_002693434:67_cdna 826^896 1 EMBV3_32577 GeneID:539750 15 GENE FOLR1 NULL folate receptor 1 (adult) EMBV3_26851 TGAGGGAGGGGGTGATAAGGTCCAAAATTAGAGGCAGTTTCTTACTGGTTTTACACAGAA Gene BVV0102_086167 + 0 NULL GK000002.2:9523395-9566764 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104439 1 XLOC_062380 Coding TCONS_00104439 XLOC_062380 Coding Coding FAM171B 2:9563952-9590366 = TSS77330 5489 1 TCONS_00104439_4 744 7 0.792450687161625 0.000279082311668986 0.000212599702323736 0.000407029852506568 9.32678393806078e-05 3.81637725390581e-05 8.53694646829065e-05 5.89220669368351e-05 5.08960151258265e-05 0.000173930155624373 7.49589097537471e-07 2.50229732751973e-06 1.107428106359e-05 1.04546474853927e-06 0 4.14138661719974e-06 0.000370140315660368 0 7.87265732128901e-05 6.59787976633251e-05 0.000308070241426515 1.02634129724714e-05 4.10332883769818e-05 0.000112825287383698 0.000314583787283414 0.000328184088209465 0.000124478069857874 0.000214538781470222 5.24969008690134e-06 2.25219226263617e-05 1.86205214070872e-05 NM_001206755.1 FAM171B Bos taurus family with sequence similarity 171, member B (FAM171B), 0.0 9894 99.98 0.999817817453088 XM_005246362.1 FAM171B PREDICTED: Homo sapiens family with sequence similarity 171, member B (FAM171B), transcript variant X1, mRNA. 0.0 5460 81.99 0.999271269812352 TCONS_00104439_4 sp|Q6P995|F171B_HUMAN F171B_HUMAN Protein FAM171B; 0.0 1418 92.61 0.998655913978495 1 coding 0 0 0 0 0.0637095902187305 0.671568046848018 -0.0310622717519894 0.602578827752239 TCTAGTGTCTGTATTTATGCTGAAAGTCCAGGTGAATGACATCATCAGTCGTCAGTACCTGAGTCAAGCAGTTGTAGAAGTGTTTGTAAACTACACAAAGACAAATTCCACAGTAACTAGAAACAATGGAGCAGTGTTGATAAGCGTTCCCTACAAGTTAGGACTCAGCTTAACCATTATTGCTTACAAAGATGGCTACGTGTTGACGCCTCTACCTTGGAAGACCAGAAGAATGCCAATATATTCATCAGTTACACTTTCATTGTTCCCACAAAACCAAGCAAATATATGGCTATTTGAAGACACTATTTTAATTACTGGAAAATTAGCTGATGCCAAATCTCAACCAAGTGTTCAGTTTTCAAAAGCCTTAATTAAACTACCCAACAACCATCATATTAGCAATGTTACAGGCTACCTTACAGTTCTACAACAGTTTTTGAAGGTGGATAATTTTCTGTATACAACTGGCATTACTCTCAATAAGTCAGGTTTTGAAAGCATTGAATTAACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAAAAGAATTAAAGGTGGATGGCTCTATTCAAATTTCTCTTCCTCTTCTACATACAAATGATGTAAGTGCAGGCGATCACGTACCTGCCTGGACATTTGATATGAACACAGGTGCGTGGGTAAATCATGGCCAGGGAATGGTCAAGGAATATAACAGTCATTTAATTTGGACATATGATGCACCACATTTGGGCTACTGGATAGCAGCTCCACTTCCAGGAACTAGAGGGTCAGGTATGAATGGAGATTCAAAGGACATAACTGCCTACCACACAGTATTTCTTACAGCCATATTAGGAGGAACAATAGTCATTGTCATTGGATTTTTTGCTGTACTTCTTTGTTATTGCAGGGATAAGTGTGGTACTCCACAGAAAAGAGAAAGAAATACCACTAAACTTGAGGTCCTCAAGAGAGACCAGACAACTTCAACAACTCACATAAATCACATCAGTTCAGTCAAAGTTGCATTAAAAACCGAGGACAAATCACAGTTATTCAATGCCAAAAGCTCCTCGTACAGCCCTCAGAAAAAGGAATCATCCAAGGTGGAAGCAGAAGAAAGAGTTTCCATGGTGAAAACTCGGGACAATTTAAAAATCTACAATGAAGATGTTTCGTTTCTGTCAGTCAATCAAAATAATTACTCCAGAAACCCAGCACAGTCTTTGGAGCCCAATGTGGGGTCCAAACAACTTAAACATGTTAACAACAATATGTCTTCGTCTCTAGGTGATACGCAAGAGGAAAAGAGGTACCTCACAGGTAATGAAGAGGCATATGGGCATCCCCACGTTCCAGAGCAGATCATGCACATCTACAGCCAGCCCATAGCCATCCTTCAGACATCTGACCTCTTCCCCACTCCAGAGCAGTTGCATCCTGCTAAGTCAGCTACTCTGCCAAGAAAGGGACAGTTAGTCTATGGCCAACTGATGGAACCAGTAAATAGAGAGAACTTTACACAGACATTACCAAAAATGCCAATGCATTCTCATGCCCAGCCCCCAGATGCCAGGGAAGAGAACTTCCCACTGGAAGGTCAACAGAGTTTGCCATCCCAAACTTCAGATTGGAGTCGGTATTCAAACAGCCTCCTGGAATCTGTTTCTGTTCCTGGAACACTAAATGAAGCTGTTGTAATGACTCCGTTTTCATCGGAGCTTCAAGGAATTTCAGAACAGACCCTCCTAGAACTGTCCAAAGGAAAGCCCTCCCCCCACCCCAGAGCCTGGTTTGTGTCTCTTGATGGAAAGCCGGTCGCACAGGTGAGGCACTCCTTCATAGACCTGAAAAAGGGCAAGAGAGCCCAGAGCAATGACACGAGTCTGGACTCTGGGGTGGACATGAATGAGCACCACTCCAGTAGAAAACTGGAGAGGGAGAAAACGTTCATCAAAAGCATGCATCAGCCTAAGATCCTTTACTTAGAAGACTTAGACCTGAGCAGTAGTGAGAGTGGAACCACTGTCTGCTCTCCAGAGGACCCAGCTTTAAGGCACATCCTAGATGGAGGGAGTGGAGCCATCATGGAGCACCCTGGGGAAGAGTCCCCAGGAAGAAAAAGCACCGCTGAAGATTTTGAAGCCAATATATCCCCCACTAAAAAAAGGGGCAGACCACCACCACTAGCCAAGAGAGATAGCAAAACTAACATCTGGAAGAAGCGAGAGGAACGCCCACTGATTCCCATAAATTAACACCAAGAGTGGTTGTGTCTCTGTTGTCTCGTGCTGTTTATTCTTGCTTTTTATTGTAAATTGCTGTGTGAACTTCTGAAGAAGCTGAGACTGAGCAATCTCATGGTCCCTGGACATGTCTCAAGCAGAGTAAATAGTAAACTGGTAATTCAGTAGTGAGAAGGCTACCAAGAAATGCTTTTTTCTGGCCTATGCTTTTTATTTATTTTTGGGTGATGAATTTGAAGTATCTGAGGGTTCAAAATGTAAAATAGTACCTGAAATTGTTGCTCAGTCATCAAGTTGAGCCCTGACTCTGAAGAATAACAGTGAAAAGTGTGCTTCTAAAGTTGCTAAAGTTCAAAAATACTGCTTTTGCTTTAACTACCCCTGTGAAACATTTAGAAATGAAACTGTATTACTCTTGTGAAATGTTACTATTATATTCTCCACTGCATATACTTGAAAATAACTGGATAAATGTTCTGGATTGATGTTATTCTCGAGTTCAAAGGCCAAACCACATTTTCTTTCATTTTAAACAGCATGTATATTGTATCAACCCAAAAGTAAATTCCATACTCACCTAAGATGGGCAAGAAGCTACTTGGTTGTTAGAGAGGGAAATGCCAGCTCTTTGGTTGTTTTTGGATAAAACTTCACAGAATAAAAAGATGTTAGTTTATCTAGAAATCTGAGAAATGAATGTTCTGATACTGAATTTTTACTTAAAAATTTCTTGCCTTGCCCCCTTCCCCATTACCAAAAGGGGAAGTGAGCTTAGCTGTCAAGAAAATTTTTTACCAGTCTTTAAAAAAATAAGTCATTCCTCCCACTCCCCAATCTTTAAGGCTCACTGATACATATAGACTGAAATTACTTTTCAGATATTTCTTCTATTCAAAAAAAGTCACTTAAACTATTAAACTTGATTTTTAAAAATCAATGAATTGAAAGTTTCTTATAAACATCCAAACTTAAAATATGTGGAGCTAAAGGAAATAAACGTTTCAATTTTTTCTGAAATGTCAAGCAGAAAAAACATGCCATTTCTCTTGAGATTCAAGAATACCTTCAGGATCCCAGGTATACATCCAGATTTTTTTGTTGCTGACATTCTAAAAATGTTTGGGAACAACAGTTTCAATTTCACAGGAAAAGTAAAAGATTTTTATTAAATCACGTAAATGCTTTTAAGTTATATAACATTTTTTTTCCAGATTTGGAAGTAATATATTCTTTCCATCATAGCAGAGAATTAGTGTGAACACATTCAAGAACTGTTTTTAAATTTTAAGTGCTTTCAACTCTGAATTATCATTCATGTCCTAAAAATGAAATTTTGTTAATTAAAATCAACTCATCTCATTTTTCTTAAAATTTCCATAAAGGCAAATGTCTGAAGCAGCTTACCCTTTTCCTTGGGGCGGGGCGGGGGCAGGGAATGAAACTAAATTGCTTTATTTCTCATGCACTAGTAATTAAGATGGGAGCAACATAGAGACCCAAGGCACATAAACAAGTTGGTAAGAACTAAAATTAACCACATTAGCTTCAGTCAAACTGTAGATAGATAGACAACAAAAGACAACAGCTTTTCCCCCAAGGCAGTAGACTTCAGCCAGGTTTTCCCTGTAACCATTTCTGAAGCATAGAACCTGTCAGATAACATTCCTTTCTGTATTAACCCAAAGAATTTAAAGATCTAGGTAAAAGTTTGCTATATTCTACCCCAATCCATAGAAGAGAGAAATGTTTTGGTTAATTTACTACATTTACTTTTTTGAGGGAGGGGGTGATAAGGTCCAAAATTAGAGGCAGTTTCTTACTGGTTTTACACAGAAAGATGTATTTAAGGTGACATAAATGAAAATGATTTGGAAAAGGTTAAGGAGTTAGTGCTCTGCTGAAGTGCCTTTGATATAGACTTGCTTTATTAGAAGGATATGATAACATCTTTCTTAAATGTGCATTTTCTTTCTGTTAGCCAAATTAAACAGATGTGCAGTTTTTATTATAAATATAGACCTAGTGTTTCACGTTGGAACAATGAATTTTGCATGCCAGTAACATCTCTTTGTGTATTTAATTCTTTTTTCAGTCTAGTTTATATTGATAACATTATGTTGGAATGAAGTTAGAAACTATATAGTAATGTACTGACTTTGACATTTTAAGTGTATATTTTTCCCACCCTTAAAAAATGTTCAATCTCTCATCTTGGTAATGGAATACACACTTTGATATAAGGGTATGCCATTAAGGTATGCCACTTACTCATTCTTGTGTAAAGGAAATGAGAAGATGTATCCCCAAGGGCTTTTCTAGAAATACTTTTGTTGGTTTCAGAATAAAATCTTATTTTTTTATACACTGCACATTCTGTTCTCAATTGGGAAGTATAGGTAATTCATCTTTTTCTAATGATCCAAAATGTGTAACTTCTCATTTGTGAGTAGTTCACAAATTTCCTGTTAAAGAGCTGAAGCCATCTACTTTTTCTTAACCCAAGTGATAATAAACCGGCAATATTCACAACTTTCTTAAAATTTTTAAATTGAAAACCACCACAGTTTTTTGCAAATGAAAACCTTGAGAATTTTAGTCACAAATTGTTAACATTTGTGGATCCTTTGTATATACTTTGGATATAACTTAAAAGCAAAATTATCCCTCAAGGAACTGATGGATTCATTTACTAAAGCACAGCTATATGTATTTTTGAATACATATGATATTGAATTTGTAAAATCCATTTGTATGACATTTATGCAATTGTATAGGGATTACGCCCTTTTATAATACACAGTATACCACGAAGGTCACAAATATTGAGGAATAAAAGCACTTCTTTGCTTTGGCAATCATTTTCAGATCACTTTCTGTATGTTTGAATCCTCTGGTATCAATACATAGTATAAAGTTTTGGGGATCTTTGGGTCAAATGATGTCCCTCAAAACTTCCAGGAAGGTGAAGCTCAAAGTTACGTATTCATTTATAGGGAATGAGTTACTCATTTCTCCGTGTACTAGAGTTGTAAAGAATTTAACTATGTTAATTTCCGTCTCAGAACTAGAATTGACATTTTGCCCTCCGTTTCCAGGTGTTTCTATCTTTTGTATTCTCTCCTCAGAGGAATCTCACATTTCAGTGTATTTATGCCATCACTACTATATTTACTGCTGGAAATTGTTAAAAATCTGATGATTTGTAAAAATGTTAAACGGTTCATTAAAGATAATAAAATCTAAAAATGTA EMBV3_38774 CTATCTGCGCACGTTGCAGTCCAAGTTTGTGCTGTGGACGGGGAGGAGCTGCAGATGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34721 CAAGGACAGCCTCGCAGATGATGAGGATGAGAAAGAAGCCCTTGGTTATGAGAAGGAAGC Gene GeneID:529535|LOC529535:XM_002692227:1467_cdna Constitutive 0 NULL GeneID:529535 13 GENE LOC529535 NULL similar to thioredoxin domain containing 13 EMBV3_08053 CCAGGCTGTGCAGTAAAGAGTTGGAAGCAAGAACACAGGATGGGACTCTTGGGGTAGGGG Gene GeneID:782368|AQP5:XM_002687280:164_cdna Constitutive 0 NULL GeneID:782368 5 GENE AQP5 NULL aquaporin 5 EMBV3_08843 ACGCGTGCCACACAATGACTTGGCCCCAGACGCATAGACTGAGGTATAAAGACAAATACA Gene GeneID:538957|TGFB3:NM_001101183:123_cdna Constitutive 0 NULL GeneID:538957 10 GENE TGFB3 NULL transforming growth factor, beta 3 EMBV3_30379 CAAGGGCTACATACCCCCTACAGCCAAGAGCTGTCTGTTCGTTGTGGTGCAGATCGCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27084 ACGACTTCTACGACTGCAAGGTGGAGCACTGGGGCCTGGACCAGCCGCTCTTTCAGCACT Gene GeneID:525727|LOC525727:XM_002697176:212_cdna Constitutive 1 NULL GeneID:525727 23 GENE LOC525727 NULL similar to MHC class II antigen EMBV3_20872 GTGCTGGAGCTGGCAGGTAATGCATCCAAGGATCCCTCACATCCACAAGTCTCTGATTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30224 ATGGAGTGGCTGCTAACAACATGAAGCAGGTCAAAGACATGTACCTTATCCCTCTGGGCG Gene GeneID:522928|PHF3:XM_002689978:7_cdna UTR3_Alt 2 NULL GeneID:522928 9 GENE PHF3 NULL PHD finger protein 3 EMBV3_10038 GTAGTGCCTTTACTCCTGCTCCTTAAGCGTCTGTCCTTCTGTGGAAGTCATGTTCTGCAC Gene GeneID:618010|LOC618010:XM_002693400:59_cdna Constitutive 0 NULL GeneID:618010 15 GENE LOC618010 NULL similar to olfactory receptor 561 (predicted) EMBV3_03633 GGAGATCAGAGATGCCAGGAAGAGTGACAGAGGTTCCTACTTTTTTCGTGTGGAAAGAGG Gene GeneID:508441|CD33:XM_002695221:958_cdna Constitutive 0 NULL GeneID:508441 18 GENE CD33 NULL CD33 molecule EMBV3_14425 TTGGTCTAGGGCTAATTTTTTCCCAGTACTGAGCCAAACTCTTCTAAGTACACTTACTCA Gene BVV0102_188657 + 1 EMBV3_25260 GK000005.2:57074073-57086324 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30585 GGAGTTCTGTCCCAACACCAAAATGCTCTTGGTTGGCTGCAAATCTGATCTTCGGACCGA Gene GeneID:540224|RND3:NM_001099104:133_cdna UTR3_Alt 2 NULL GeneID:540224 2 GENE RND3 MGC148524 Rho family GTPase 3 EMBV3_19174 AGATGTGGGATTCCATAGAGAAAGCTTGAGACCGCCAGCCTCTCATCTCCTGCCTGGAAA Gene BVV0101_042584 + 0 NULL GK000007.2:67692109-67715958 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29905 CATTCAGTCCTTCAGACGGTCAGTCAACAAACATCAAGTGCCTGAAAGCGCTGACCACAG Gene BVT0102_413305 + 1 EMBV3_13271 GK000008.2:71457016-71542980 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41050 AAGGCTACTCAGCCTATTACTGTGAAGGGGAGTGCTCCTTCCCGCTGGACTCCTGCATGA Gene GeneID:788948|BMP8B:XM_002686465:504_cdna Constitutive 0 NULL GeneID:788948 3 GENE BMP8B NULL bone morphogenetic protein 8b EMBV3_15937 TAGCTAATGAGGTGAGTAAGGGTAACCGCATACAAAGAAACCTCACTTACAGCTGAGTGC Gene BVV0102_246382 + 0 NULL GK000012.2:36318423-36335915 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036866 1 XLOC_021251 NonCoding TCONS_00036866 XLOC_021251 NonCoding NonCoding LOC100848283 12:36326900-36336450 j TSS26743 707 3 TCONS_00036866_2 40 2 0.92617027961043 6.12393362818923e-10 0.00041213533974209 6.99508572473582e-05 2.90677563923492e-10 0.000654004279692904 1.63674848448822e-10 8.24853199887564e-06 0.000126068086058039 2.99857273891315e-05 0 0 8.96659639493964e-12 8.52262125454454e-05 6.65345416133081e-06 0.00106211657196457 0 0 0.002697182197292 0.00049699400509898 8.1373790613468e-05 0.000123588496702324 0 0 2.37123562006314e-05 0.000235184004088168 0.00011067889001379 2.672870256076e-05 0 0 0 0 noncoding 0 0 0 0 -1.27086776089134 0.00408486454095019 -0.0143084154020907 0.807956455253804 CCGGAGGCTCCGGGTGAAGAGCCCGGCGGCCGCGCCAGCCTTGCCGGAGGAGCCGCGAACACCCCGGGCGAGTCCGCGCACCTGTCCGCTCCCGGCCCTGCTCCCGCTCGACCGCGCGCTGCGCACCAGACTCGGCCCGAGGAGCTCCGGCCACAGACGTGCTTCAGAGAAACTCGGATCCTGACCCTACGATGTCCACTCTGCCTGCACAGTGTCTGCCTCCTGTTTGGATCGGAACCATGGCGTCCAAGGCAAAGGCGCAATGGGATAAAGCCCCAGACCCCAGCGTCTGGTGAGGAGGAGCCTGGCAGGTGGCCAGGATCATCTCTGTGGTGTGAGCACTGAACACAGATGTTGGCTCCTGACGACTGCTGGGCGCCCCTGCCCCTGGCCTCCAGAACAGAATCAAGGCCGTTCCAGGTCCTTTCGGGGCTGAAGTTCATCCAGAGAAAACCAATTCCCTTCTTGACTTAGGTCTTCCTCTTTCTGAATGTCAACACTGTCTCGGGTTGTATTCATGTTTTGGGTAGAAACTAATCTCTTAGCTAATGAGGTGAGTAAGGGTAACCGCATACAAAGAAACCTCACTTACAGCTGAGTGCTAACTACATTTTAAACCACCTTAACCCCAAATCCAGGTATGATAGCAGAAAAGCTAGAAATAAATTATTTTCGTGTCTGTCTAATAAATCACACCCAGAAATGAT EMBV3_03302 TCATGGGGCAGGCTTGGTTGTCCCAGTGGATAAAAATGATGTTGGATACAGAGAGCTCCC Gene GeneID:525698|C8H4orf27:NM_001081593:5_cdna Constitutive 0 NULL GeneID:525698 8 GENE C8H4orf27 C4orf27 MGC149010 chromosome 4 open reading frame 27 ortholog EMBV3_24006 CCTAGACAGTCAGACCTTGATTTTAAAGTGGACAAAGGTGGTTGAAGGCAGCATCTGGTG Gene BVV0102_081227 + 1 EMBV3_23343 GK000017.2:18885246-18892760 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076795 TCONS_00076793 TCONS_00076792 TCONS_00076794 1 XLOC_046916 Coding TCONS_00076793 XLOC_046916 Coding Coding CCRN4L 17:18887207-18907519 j TSS57579 7259 1 TCONS_00076793_3 361 0.149194103871057 3 0.642755157303924 7.68522799347276e-05 7.08719469203089e-05 2.81546711420533e-05 9.20368315608539e-13 2.77876743512961e-06 4.20192211813702e-05 2.21041158602987e-05 0.000103277762419676 2.39288577464777e-16 5.55738163095392e-10 3.33940688527119e-11 3.82607481648753e-05 9.25856931071945e-05 2.33804939678956e-12 8.51288625597948e-07 0.00156864096978235 0.00253899288754915 0.00106034538728061 6.07606210521525e-07 2.56403064303339e-08 2.32633043929888e-119 0.000193597286829146 0.000390833687127398 0.00102734871466114 4.84872839151943e-05 3.90833312790953e-05 1.67348536852797e-05 0.000252485385116711 0.000220173303604492 1.16203158610478e-08 NM_001082454.2 CCRN4L Bos taurus CCR4 carbon catabolite repression 4-like (S. cerevisiae) (CCRN4L), mRNA. 0.0 3027 99.88 0.231712357073977 NM_012118.3 CCRN4L Homo sapiens CCR4 carbon catabolite repression 4-like (S. cerevisiae) (CCRN4L), mRNA. 0.0 1382 86.88 0.157321945171511 TCONS_00076793_3 sp|Q9UK39|NOCT_HUMAN NOCT_HUMAN Nocturnin; 0.0 721 95.83 0.994459833795014 1 coding 1 1 1 1 -0.0633453501112606 0.565917078498431 -0.0359036386797217 0.517858968304785 GTGGCAGTCAGATGTCACTGGAAAGTGTATCCCATGGGAAACGGCACGAGCAGGCTCTACAGTGCTCTCGCCAAGACACTCAACAGCAGCGCGGCGTCCCAGCACCCAGAGTACCTGGTGGCCCCTGACCCAGAGCACCTGGAGCCCATCGACCCCAAAGAGCTCCTGGAGGAATGCAGGGCTGTCCTGCACACCCGGCCCCCACGGTTCCAGAGGGATTTTGTGGCTCTGCCAGCCGATGGCCCCAGTAGCCACCCTCCCATTAGGGTCATGCAGTGGAACATCCTTGCCCAAGCTCTTGGAGAAGGCAAAGACAACTTTGTCCAGTGCCCTATGGAAGCCCTCAAGTGGGAAGAAAGGAAATGTCTGATCCTGGAGGAGATCCTCGCCTACCAGCCGGATATCCTGTGCCTCCAAGAGGTGGACCACTACTTCGACACCTTCCAGCCCCTCCTCAGTAGACTGGGCTATCAGGGCACCTTCTTCCCCAAGCCCTGGTCGCCCTGTCTGGATGTGGAGCACAACAATGGACCCGACGGCTGTGCCTTGTTCTTCCTCCAAAACCGATTCAAGCTGGTCAACAGTGCCAACATCCGGCTGACGGCCATGACGCTGAAAACCAACCAGGTGGCCATTGCCCAGACCCTGGAGTGCAAGGAGTCCAGCCGCCAGTTCTGCATCGCCGTCACCCACCTGAAGGCACGCACCGGCTGGGAACGGTTTCGATCAGCTCAAGGCTGCGACCTCCTCCAAAACCTGCAGACCATCACCCAGGGGGCCAAGATTCCCCTGATTGTTTGTGGAGACTTCAACGCAGAGCCCACAGAGGAGGTCTACAAGCACTTTGCTTCCTCCAGCCTCAATCTGAACAGCGCCTACAAGCTGCTGAGCGCTGACGGGCAGTCGGAACCTCCGTACACGACCTGGAAGATCCGGACCTCAGGCGAGTGCCGGCACACGCTGGATTATATCTGGTACTCCAGGCAGGCACTCAGCGTGCGGTCAGCCCTGGACCTGCTCACCGAGGAGCAGATTGGACCCAACCGGCTACCGTCCTTCAATTACCCTTCAGACCACCTGTCCCTAGTGTGTGACTTCACCTTTAACGAGGAACCTTGATGGATATTTATAAACGCTTGTCTGTGTCTTTTTAATCGCAGGAGTCTTAACCAGGGATGTTTCAGGAAACTGAAATAGAATAAGTTGACTGAGGAAGGGTTCCCAGTTTCTCTCACTTCTTTTGTTTCCAGCATGCCCTTGGGAAGGAACCCCGTTAGCTCACATTAAAACCTTTTCCATTAAAACCTACAGCAAAAAGGTTTTTGCACTCCAGTATTGCTTTGCATTGTTTTCTTTCCCTTAGGATTAATTACATGTTGATCATTTAAGGGCATTATATTGGGCTTGTTTTGAAGCTTTTTCTGTTAGAGTCATTAAAATAGTAGACTTGCTTGAGTCTCCCATAATTAACAAGTATGCAGGAACAGTTTCTCTAGACATTTCAAGTTATTTATTTGTGTTTTTTAATATCAAGTTATGCATGGCAATATTTATTTTTTATATCTTCATGTAAAATTAAGTAAATTATAACATGAACATGCTAAAACCATGCAAAACATAAGTTATAGAGTAATTTATAGTAATTTTCTTAAAAGCTTTAAAGATGTTTTTATTGGAATCTAATAAAATAATAGTGTACAAAGGAACTATTTAGTCTTGAGGGGTTTTTGTTATTTAAGTGGAGATACCAGTTCTCTATGATCTCTTCTTCATAAATCTTTGCTATGCCTCTGTGTTCTCCATTAGTGTGTTTCTTGAAGAGATTCCATGGCTAGTCTTCATTATTTGGTCACTGTTACACATTTCCGGTATTCCCTTGGAGTGCTCTTGGTGTTTATTCGCAATCACTCTGCCATTATTTGTATTGAATGTGCTTTGCACAGTACATATATTTAGGTGTGTGTGTGTGTGTATATATATATATATATATAATTTGGTAGTGGCTAAAGACAGTAGGACCTTCTTTTTAGAGATGGGAAACTTCCTGGTCTGTTCATGACGCTGTGGTTGAGATTTACTAAGATAGCCAGGCAACTGGTTTTAAAAGATCTAAAAACCAGAATATAAAAAGTTAACCTGAAATTCTCTTCGCTCAGAAATAAAGTGGTAAAGATAAAAGGTGAAACTCCTTCCTAATGAAATCCCAGAAAACAGCCCACTGGTAATAATATATTTTAACCCATGAGTTGTAAATATTTAAGATTAATAAATAGTCTTTTAAAGCTAGTGTTTTAATATCTTGTTTTTTTAATGCATAGGGAATCTGAGAATAAATTTGGTCTTTTAATACTGTTAATGTGGTGCTCACACAATCCTAGACAGTCAGACCTTGATTTTAAAGTGGACAAAGGTGGTTGAAGGCAGCATCTGGTGCTGTTTGTGAGGTATCACTTGGTGACAAGGTTGGAGTCCCCAAAAATAGTTCCTCCAGGTATTCTGCATTGGAAATGCTTTTGAAACAAATAAGGGTTTCAGTATATATTGTACACACAAAATATCTGGAAGGAATGGCAAGTAGGAAGAACATATGTACCAGCTGTCATCTGGTTCAGATCTTAGCAGTGACTGAATTTGCACATTGAGAAGCAGAATACTGATCTGGACAGGCATTAAATACTGTTTACCTACCCTAAAGCACACCAGTTTGAAATCATCATACCCATATCATAAGCAAATCTAGATGAGAATAAAAGCTAAAAAAAGTGTTTCAATTGCAAATGTTAATAGGCTATGGGAGAAGGGTGGGAGTTGGTGGGAATGCCTCTGAGCAAAAGGGCTCCTGGAAATATCACAAGTCAGTCACCCTTCAGCATTGCCATGGCGGTAGGCTAAACACATACTTCTGTATGCTTTTGTTGTATTTGTCTTCATTTAAAATGTAGTCATGTGAGCATTTTATGTAAAGTTTTTTTAGTAGTTTATAAATCTTGCTAGGTGGCACTTTTATTTCTCTAGTCTTTCTTTTGTAGACAGCTCTGCCTTGTGGACCATCAGTTACCTGAATGCATAACGGCAAATAACAAATGTCGAAGGTAAATTGTCCAGATTATTGAAGACAGTGAGAATGGATTTTTTTATTCCTCCATGGCTGTATTTCATGAAATCCTACGAGGTGGTAGGGATGACATAGTAAAGTATAATGGTGTGTATAACATTTAAGTCCCTTATTTTTGGCTCTGAACTTTGCATATGACATAAAACTGCTCCTAATTTAAAATGGAGCCTAGGGACTTCCCTGGTGATGGAGTGGGTAAGACTCCCAGTGCAGGGTGCCCAGGTTCGATCCCTGATCAGGGAACTAGATCCCACATGCCACAGCTTAAAAAAGCTCCTGTGTGTCACAAGGAAGGACCTGGCACAGCCAAATATTTAAAAAAATAATTGGGCCTAAAAAGCCCAAAAAATCTGAGCAAGGTCCCAGTGGGACTAAATTCTAGAAAAGAAAATAAAAACACAAGCTGATAATAACTGATTTCAATTGGAAAGGCATCCAAAAACTGCTTGAATAAGGAGCTCTGAACCTTTTTATAATGACATGTATAAAAATACAGTACAGGCAGGCTTTTATCTAGAGTGGTTGGATACTGGAATGGCAAGAGGTCTGGAGCTGGGCTTATAAAAGCAAATTCTGTAGAAGGGCATGGGCTGTAAGTAAAAGGACTTAGCTGTGACCACTGTGACACTCCCTAGGGCCTCAAGCATCACACCTATCTTGTCAATCTCAGATTTGTCAGATATTTGTAAAACAATATTGTAAATTTTAGGTAAGTCATCGAGTAAAGGTTTAAGGTTAAGGTCGGTGCTTAGAGTTCAAAGCAAAAAAGGAAAGGGCACTGTACTTGATGTCCTAACAAGCCACTCTTAATCCTTCCATTTGAAAGGGCAGATAGTGTTAATAGAAATTAAGACCCAAATAGGTGAGGGACTGTTGAGTGGCCAGATTTTTTCACCCGTTTCTCCAGACAGATATGAGGTTGTAGGTTAGTGATTCAGTTTCAGGACAGGATGTCAACCCTACTATGACTTGTAGAGTAGAAATACCTGCCTTTGACAGATGAAACAACAGCCACAACTCCAGGCTCACCAGATGTCTGTGGAAAGCTCACCTCTAAGAAACTATTCGTTAGGACGTAGTTGTATCCATTCCTCTTGACAGAATGTTAGGAGAAGCCTTGCTGTTTCTAGGCTGCTACTGGTAAACCAAGAGGAAATCTCAGGATGAATTCCTGTTTGCTTTGGGTGCTGAGACATTCAGAACCAAACCTTATAGCTGGATTTTCATTACTGTGACATTCTGTAGCTTGTATTCAATTTCCTTTTGCGGTCCTGCCTTTTTCTTCATGTCACTGTCTTTCTTTCATCTGCTTATTTTTGTTGACTTTTATTTGTTCTTACAATATATAAACTATCAAGTTTTTTTTTTTTTAATCTAAAGCAGAGTCTAAACTGCCACATTGAGCAGATTCAGGTTTCTAGATGTAGACCACATTAGAATGCTGGAATATAATTAGAGTCCTGCATCACAGGGAGAAAAACACCAGTCAGGAGAGATGATGGAAAGCTGCATACGGGATACCCCTGACATCTCAGATTGGTAAACCTGGAGATAACACCCAGCAAAATTCTGCAGCATTTTCTATTTAAGTTTATGAGAGCAGGGATCACTGCATGGTGAGATAGTAGATGGGAGGGAACAGAGGTTGAGGCCAGAGGAGAAGTTCTGTCTGTAGGTCTGCCACTGATTACCTGAACTGAAACTGAGTCAAGTTTTTCTGAACTTGTTTATTTACAATACAGGGAATAGACCAGGAAATCTCTTAGGTTTCTTAAAAGCATTAAAACTGATTTGCACTTCAAGACAATTTGGGTTAATTGCTGCCACTGCTCAAAAATATTTTTGAAACTTTTTGGAACAGTTTGGACATCCAGTTCTCTGAAGGTCTCAAGAAAAGTAGTGTGCACTTTAGCCGTGTTTCATTTTGCCAGGTATGGCAGTACCTACCTAGTTTAATTCACATCGGTTTCTTAATCTCAAGTGACTTCACTATTTCTAAAACTAAAACCTCCCTTGGTAGGAAAATTTGTCTCTTCTCCTTGCGTTTGTCACTCAGTCATGTCTGACTCTGTGCAACCCCATGGACTGTAGCCTGCTGGGCTCCTCTGTCCATGGGATTCTCCAGGCAATAGTAGGGTGGGTTGCCATGCCCTTCTCTAGGGATCAAACCCAGGTCTCCTGAATTGCAAGGCAGATTATTTACCATCTGAGCCATCAGGGATTTACCATCTGTGTCCCTAGTTAAGTATGTATAAAAATTTAGGTTCTGCTCCAAGAAGCAATTCAAAAGTATTTTTTCAAACAATGGTAGCATTGGTGGCACTTAATATATAGCTTTCTGAAAGTACTTTCTTTTAAAGGACAAGGTACTAACGTAGTGTACTCTTTTAAGAATTTAAAAAAACTCATCCTAATTAACTCATTAAAATTTGAGAAAACGGCTTTAGAGTCAATGAAATATACAGTATATAATACCCTAAACTACCTTTTTCTGTTGAACGTTTTAGAAAAGCTTAGATTAAGACAGATGTCTAAATGTAAAAGTTGTGACAGAGGTGTCCAAACCTGGCTGCACAATGAAATCACACTGAGATTTTTTTTTTTTTAATACCAATGCCTGGCTCCCCCTTCCACACATAATTTAAGTGATAAGGGATGTGACATCGGCAAAAAATCTTCACAGGTGATTTCCAGCGTGCAGCAAAGTTACCACTATTTCAGTGAATTCATGTCCTACAACTACAATGTCCTACAAGTAATTTGCAGATTCTGTAAAACAGTTTAGTATCCACCTTTCATGCACTTATCACATCATTAAAACCTTGTAAAATAAGATTTTTTTGTTTAAACATACAATGGGAGAAAACTGCTGTTACAGTCTAGAGTTTTGTTATGGAGCATTTTGCTTTAAATATTCATGTTTTTCTAAGTTCTTAACTTGGAAGTTGTATCATTTATTTATAAGTCCTGAACCCAGAGCATTACTGCTGAAGTGCACTGTTTAAAAAGATAGCTATAGGTACATAAAAAGTAGATAAATGTCAAATCAAATACAGCGTACCCAAAGATATTGGGGGTTTGGTTCCAGACCACTACAACGAAGCATCTCAATAAAGCATCATGTGAATTTTTGGTGACCCAGTGAACACAGAAGTGACATTTGCATGACATTAGTCTATTAAGTGCAATAATATGATCTCCAAAAAAAAAACTATGTACCTTAATTCAAAAATATTTTATTAACTCGTCATCATCTGAGCCTTTAGTGAGTCAGTTATTTTTCGCTGAAGGAGGAGGGTTTGAAATATGAATATTACCAAAGAGATGATTGCTGTTGGAATAAGGACAGTGACAGACACGTTGACAGCAGTGTTGCCACAGATCTTAGGTCTGTATAAAGCAGTGTATCTGCGAAGTGCAGCCTAGTGAAATGAAGTGTGCCTGCAAGTCTCCCTGCTGCACTTGTGTTTCTGGCATGATTCAGGAGGCAGATCAGTGTACTTGCAAAGGTGGGGAAAGAGTGTCTTATTCTCAGGAGGACTGGCCGAGCTCTAACTGTGGAGGATGACAACAACGAAGGGACTGAAGGACAGGTGAACCACAAGTACAGAGGACTTGTACTATGAACAGTGAAAAGCCATGAAAAGGGAAGTTGCTGGAATGGCTGTGGAACTCAAAGTAGGGTTCCTCTTGCCTCCCCAAAGTGTGCTCTAATATAGATCACGTATGTAATGTCCTCACATAAAGTAGACCAAGAGGCTTAAAGGATCACGGGATAGGTACTTTATAAGCCCAAATATTGTTAAACCTGACTCATTTGCATACAGGGGTCAGAGTGGCTGATAATGAACCAGGTGCTATGTCCCTTACATTCTGGTTTCACAGTCATCCCCCTAATGGAACTGCCTCTTTATTGTCACTCCATCCATTTTGGTGGCTTTTTCTTTGACCTTACTTGCTTGGCCCTTCCTGGTACACTTAAGAATGTTCCCACCATATCTTGAAATGTGACCTCATCTATCCTGTTGCCTTTCTGTGAACAATCCTTGATCTCCACTTGCTGATTACTTTTCCTCTCTCCTAGCCCTTTATATACTTGATGTTTTCAATCTTTTCTCAGAGTTCACTCAGAGTAGACTACCCC EMBV3_09697 AAAGGTCTCCTCATTCTGTCTGCAGAGAGGGCAAAGGTCTCCTCATTCTGTCTGCAGAGA Gene BVT0102_213236 + 0 NULL GK000009.2:88160722-88183423 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40509 GTATCTTATTGCTCATTTCCCTTCGGAGGCACAACCAGAGGATGCTACTGAATGCCACAG Gene GeneID:664644|T2R10C:NM_001046631:14_cdna Constitutive 0 NULL GeneID:664644 5 GENE T2R10C NULL bitter taste receptor Bota-T2R10C EMBV3_07610 CGGAAAAGCAGGCAAGAGTTGACCCAGGAATACAGTCTCAGACAGTTCCTTAATGAGGAG Gene GeneID:510845|C27H8ORF79:NM_001076832:4_cdna Constitutive 0 NULL GeneID:510845 27 GENE C27H8ORF79 MGC143146 chromosome 8 open reading frame 79 ortholog EMBV3_06792 GACCAATCATGACCTCCTTGCTTAGTATGCAGTAGAGATTCTTGTTCACTAAATGCCTCC Gene GeneID:529922|ZRANB3:XM_002685411:11_cdna Constitutive 0 NULL GeneID:529922 2 GENE ZRANB3 NULL zinc finger, RAN-binding domain containing 3 EMBV3_06215 GGCACATCCTTGCAGTCGTGATGTTATATTGGTGGCATCAGTCGACGGTGTATGTCATGC Gene GeneID:534876|PAQR3:XM_002688378:13_cdna UTR3_Alt 2 NULL GeneID:534876 6 GENE PAQR3 NULL progestin and adipoQ receptor family member III EMBV3_24189 CCGCTTCATTGCCATCTGCAACCCACTCCTCTATTCTGTCCAAATGTCAACACATCTCTG Gene GeneID:788552|LOC788552:XM_002687512:429_cdna Constitutive 0 NULL GeneID:788552 5 GENE LOC788552 NULL similar to olfactory receptor, family 9, subfamily K, member 2 EMBV3_23285 TATTTGCAGCTGGTCTTTAGCTTGGAGGTGAAGGAGGTGGACCCCAGTGAGCACACCTAT Gene GeneID:100337164|LOC100337164:XM_002699834:2_cdna Constitutive 0 NULL GeneID:100337164 X GENE LOC100337164 NULL melanoma antigen family A, 9-like EMBV3_30450 TAACAACACTGCAGAATGAATTTCCTGTGCGTAGGGGATGAGGGAGGAGTTGAAGCTGGG Gene GeneID:281626|ANXA5:NM_001040477:34_cdna UTR3_Alt 2 NULL GeneID:281626 6 GENE ANXA5 MGC126971 annexin A5 EMBV3_12172 AAAGAAAAACGACGATGGCTGGTATGAAGGAGTCTGCAATCGAGTGACTGGCCTGTTCCC Gene BVV0102_093825 + 0 NULL GK000013.2:18177778-18182702 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042096 TCONS_00042092 TCONS_00042100 TCONS_00042102 TCONS_00044633 TCONS_00042095 TCONS_00044632 TCONS_00042090 TCONS_00042091 TCONS_00042094 TCONS_00042099 TCONS_00044634 TCONS_00042089 2 XLOC_025603 XLOC_026241 Coding TCONS_00042099 XLOC_025603 Coding Coding ABI1 13:18094883-18181725 j TSS31421 2356 1 TCONS_00042099_5 447 9 0.972973595421518 0.0125543873721357 0.00843086079943184 0.0135159978283582 0.00858208585786239 0.0125262222027645 0.00368706718994378 0.0061142379810951 0.00567065815456234 0.0104944583285909 0.00388812660551572 0.00160696879887037 0.000414760435847671 0.00168802490603791 0.00580645150124715 0.00327661818055213 0.00121722438380598 2.30101301875109e-06 0.00595268899062033 0.00764847317567521 0.0108444921709891 0.00706823174000772 0.00202928682782693 7.87265088795242e-07 0.00136765846499351 0.0121248728226681 0.00743967713178473 0.00729087215157819 3.63105270802265e-05 0.000189109848175694 1.40733729244107e-08 XM_005214269.1 ABI1 PREDICTED: Bos taurus abl-interactor 1 (ABI1), transcript variant 0.0 4123 99.87 0.973684210526316 NM_001178121.1 ABI1 Homo sapiens abl-interactor 1 (ABI1), transcript variant 8, mRNA. 0.0 3195 90.45 0.991086587436333 TCONS_00042099_5 sp|Q8IZP0|ABI1_HUMAN ABI1_HUMAN Abl interactor 1; 0.0 739 84.65 0.997762863534676 4 coding 0 0 0 0 -0.345135807240275 0.553658099411739 -0.0269833019204787 0.671339943691088 GGGAGGGAAAGGCAGGAAAACTCGCGAGAGAACGAGCTTGCCGCGCCTGCGCGAAGTGGGTGGAGGCGGGTGGAGAAAGTGAGGAGGAAGAGGAGGAGGTGCTGTCCCACAATACCAGGCGGGAGGGCGGGCAGGCGGTTTGTATCCGGGCTGTGAGGTGCTGGGAGCCTCCGCGGACCTTGCTGTTGCCTCTGTCTCTTTAACGCGAGAGGAAGCGATGCGGAGGGGTGGAAAATGGCAGAGCTGCAGATGTTACTAGAGGAGGAAATCCCGTCCGGCAAGAGGGCGCTGATTGAGAGTTACCAGAACCTGACCCGGGTAGCGGAGTACTGTGAAAACAACTACATACAGGCTACAGACAAGAGAAAAGCTTTAGAAGAGACCAAAGCCTATACAACCCAATCCCTAGCTAGTGTCGCTTATCAAATAAATGCATTGGCTAACAATGTGCTCCAACTGCTGGACATCCAAGCCTCTCAGCTCCGGAGAATGGAGTCTTCCATCAATCATATCTCACAGACTGTGGACATTCATAAAGAGAAAGTGGCTCGAAGAGAGATTGGTATTTTGACAACAAATAAAAATACATCAAGAACTCACAAAATAATAGCACCTGCGAACATGGAGCGACCTGTAAGGTATATTCGGAAACCTATTGACTATACAGTTCTGGATGATGTGGGCCACGGTGTCAAGCATGGAAATAACCAGCCTGCAAGAACTGGCACGCTGTCGAGAACAAACCCTCCTACTCAGAAACCACCGAGTCCTCCCATGTCAGGCCGGGGGACGCTGGGACGAAATACTCCTTACAAAACCCTTGAGCCTGTTAAACCTCCAACAGTTCCTAATGACTACATGACAAGTCCTGCAAGGCTGGGAAGTCAGCATAGTCCAGGCAGGACGGCTTCTTTAAATCAGAGACCGAGGACACACAGTGGAAGCAGCGGAGGAAGTGGCAGCCGAGAGAACAGTGGCAGCAGCAGTATTGGCATTCCCATCGCCGTGCCTACACCCTCACCACCCACCATTGGACCAGCAGCCCCGGGCTCAGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAGATTTCTCGGCACAACTCTACCACTTCCTCGACATCTTCTGGTGGATACAGACGGACTCCCTCTGTGACGGCTCAGTTTTCTGCTCAGCCTCATGTTAATGGAGGTCCACTTTATTCTCAGAATTCAATTGCCGATAGTCCAACTCCACCACCACCACCTCCGCCAGACGACATCCCCATGTTTGATGACTCGCCACCTCCGCCACCGCCGCCGCCAGTGGATTATGAAGATGAGGAGGCCGCAGTAGTTCAGTATAACGACCCATACGCAGATGGGGATCCTGCTTGGGCCCCCAAGAATTATATTGAGAAAGTTGTGGCAATATACGATTATACAAAAGACAAGGATGATGAGCTGTCGTTTATGGAGGGTGCAATCATCTATGTAATAAAGAAAAACGACGATGGCTGGTATGAAGGAGTCTGCAATCGAGTGACTGGTCTGTTCCCAGGAAACTATGTGGAATCAATCATGCACTATACTGATTAAATTTTTGCTTTTAAAGTAGATTCGTATTATCACTCAGTCATACTGTGGGACTATTATGGTTAACAGAATTGTCTTAAAATGTTTTAAAATGTGCCCATATTTTCAGAACATGCTGTTTTATTGGTATAATTGAATGTCTACTTATAAGCATAAATCTCTGAGGCAGTTTGTGGATTGCTGAGCAGCATTCTACACGAGGCTGCCTGTCAGAGATTATGCTTACATACTTACTTACACATTGTTAACCTGATGACCAGCCTAAATATTCTGGGGGTGTGGGATCTATTTAATAAATCGTGATTCAGATCGTGCCATCACATGTCTCAGTGCAGCATGGTTACTAACGCTCTGTCAAACTAATACTAAAAATCAGAAAACTTAAATGCTGGTGCTGGTCATACTTTTTGTTTAGACTCTCTCATTCTTGAAATATAGTTTGTTTAAAGCATGCATACAAATTTATGTATTGAAATATACTTAAAAAAAATCCAAGATGCTTCCAATTTGTGTAATTCTTGGAGTACACGTACTTAGGTCTCTTGAAATGAACTGAGTCTCTAAGTTCTCCACGTAAAACAAAAACAAAGGGTTACCTGTAATGTTGTAATTTGTACCTAAGTTTTTTAATCAGTGAATTTGCATTATAAATTTTTTCCATTCATAAATACGTAAGTGAACCAAAGGTTTTTTTGTCCTTTCCTTCACTGGTTTGCTTTAAAAATAATGATAAATAAAAGATACCGATTTATTGCAGAATTATGGTTCTATTTTCTCAATA EMBV3_40048 GCCAGATCTTCATCTGCAGCCAGGAGGAGAGCATAAAGCCCAAGAACATCGTGGAGAAGA Gene GeneID:515326|EIF3K:NM_001034489:622_cdna Constitutive 0 NULL GeneID:515326 18 GENE EIF3K MGC127071 eukaryotic translation initiation factor 3, subunit K EMBV3_38377 AAGACTAATTATCCTGATTCAGCAGGCAAGTTGTTACCACTGACTGAAGAAGAGAAAACT Variant GeneID:615847|FAM33A:NM_001038579:51_cdna 142^318 1 EMBV3_04673 GeneID:615847 19 GENE FAM33A MGC133702 SKA2 family with sequence similarity 33, member A EMBV3_36120 AGGCTCCTGTTTGGAAAGAGACCTGCTGGGACGGTTTATCCTGTTGGCCTGGGATTATGA Gene GeneID:100337410|LOC100337410:XM_002691606:183_cdna Constitutive 0 NULL GeneID:100337410 11 GENE LOC100337410 NULL hypothetical protein LOC100337410 EMBV3_41712 AAGCTATGACAAACCTAGATGTGATAAAAAGCATAGGCATCACCTCGCTGGCAAAGGTCC Gene BVV0102_231101 + 0 NULL GK000029.2:41082250-41087529 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25596 GCAGAAACGATGAATTTTCTTCCGGGCTTGCGGCGTTTTGGTTTCTGTAGCCTGCAGGTG Gene BVT0101_037675 + 0 NULL GK000030.2:95714845-95933519 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252734 TCONS_00162859 TCONS_00252770 3 XLOC_155675 XLOC_099740 XLOC_155711 NonCoding TCONS_00252734 XLOC_155675 NonCoding NonCoding - X:95247957-95249253 - TSS189955 1296 2 TCONS_00252734_1 104 0.297839506172839 1 0 0.000125978559416802 6.59041324922674e-05 0.000157089383464979 0.000342802558443606 4.5714674701642e-05 0.000186304963953973 8.40707722400576e-05 1.36914422125955e-05 6.08806702143565e-06 0 0 0 0 0 0 0 0 4.91687454421759e-06 3.31988217048203e-05 3.51433445503223e-05 2.34238346292765e-06 1.21196694268394e-05 0 0 0.000284111805092251 2.7000412336909e-05 0.000240126985587534 0 0 0 XR_232567.1 LOC101909576 PREDICTED: Bos taurus uncharacterized LOC101909576 (LOC101909576), 0.0 724 89.83 0.416666666666667 0 noncoding GTGGATGAGTCGTTTTCTATGTAGTTTCCCTCCCTGCCCCCTTTCATTTAGTATCTCATTGTAATAAATATGTTATTGTTGGTGTTCAGTCCGTCGGTCGTGTCCGACTCTTTGCGACCCCATGGACTGCATGCAGCACGTCAGGAGGCTTCCCTGTCCTTCACCATCTCCCGGAGCTTGCTCAGACTCCTGTCCATTGAGTCAGTGATGCCATCCAACCATCTTGTCCTCTATCATCCCCTTCTCCTCCTGCAGTCTTTCACAGCATTGCAGGCTGTCTTACCCTCGATCCCAGTGAGCATTTTATTTCACTCTTCCACTGGGGAGGGGAATGTATCCTGCAGACCAGTGTGCAAGCTACAATCTGACAGCCTTGAGACCTGAACATAGGGATACTCTCTGAGGAACCCTGAGAACCTGGAGAGCTGACGCTTCCTCTGTGTGCCGCAGGTCCCAAAGGCATAAAATGAGGGCAGTAATAGCATCTGCTTCTTGGGTGGTGTCCAGCATCAATTACCCAGCAGGATATTAGTTTGGTGCTTGTCCCTGTCACGTTATTATTGTAGGTGCCTCAGATGGTAAGGAGTCAGCCTGCAATGCAGGATAACCAGATTCAATCGCTAGGTTGGGAAGATCCTCTGGAGAAGGAAGTGGCAACCCACTCCATTATTCTTGCCTGGAGAATCTCATGGGCAGAGGAGCCTGGCAGGCTACAGTCCAAGGGGTCTTAAAGAATCAGGCACGTCTGAGCCACTTTCACTTCCACTTCACGTAATGATTTTCAAGTTAAAACTCACTGTCATAATAAAGTTCTCCTTAAACATACAGGAATTCCTCAACGATCCGAAGCAAGACAAGGGTAACCAGTCCCTCCACTATCATTCACTATGTCAGCTTATATTATTTTATTGTAATTTTCAGTGTCAAAGGGTCCGGTGAAAATTCTCACAACGAGCTCTCTGAAGGGCTCAGATGAAGTTTGGATCAGCCAACCGGCAGAAGCAGAGGAAAACCAAACCAAACCAGCCGCTTATTGTGGCAAAATGCTTCTTCTCATTTTATTAAAGCGCAAGAGCGGAGGAAAAACCAGCCCGGCGACACTGTGGAGCAGCACTGCCACCTGCAGACCACAGAAACCAAAACGCCGCAAGCCCGGAAGAAAATTCATCGTTTCTGCTGGGTTTTCGCGCAGAGGACTGAACAGCGTGGATGGCAAAGTTAAGAGGGATGACCGAAAAGACCAGAGAAAGGAAGGGAATCTCTCGAAGGGGTCCGGGCAAACTACCCCTGGACAGC TCONS_00245192 . 3' 13008 TCONS_00245192 . 3' 14303 EMBV3_40012 TTTCTCAATACAAGGCGCAAGGTGGACTGGCTCACAGAGAAAATGCATGCCAGGGACTTC Gene GeneID:614129|LOC614129:XR_083576:237_cdna Constitutive 0 NULL GeneID:614129 1 PSEUDO LOC614129 NULL similar to Eukaryotic initiation factor 4A-II (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) EMBV3_16441 GTGGCCATCTGTTCACCCTTGAGATACACCACTATTCTGACCCCCAGGACCATTGTCAAA Gene GeneID:512399|LOC512399:XM_002693262:4_cdna Constitutive 0 NULL GeneID:512399 15 GENE LOC512399 NULL similar to olfactory receptor 649 EMBV3_12380 GAGCTTGGGACTAAACTGGAAACAATCACTTGCCTTAAATTCTGTGAATACTAAACCGGG Gene BVV0102_408438 + 0 NULL GK000008.2:17245918-17271518 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229922 1 XLOC_139416 NonCoding TCONS_00229922 XLOC_139416 NonCoding NonCoding - 8:17270238-17271011 - TSS171426 773 1 TCONS_00229922_1 33 0.601552393272963 1 0 0 4.33308969335497e-06 0.000167601468507755 0 0 4.62749501252056e-06 0 0.000175987213179561 0 0 0.000145109983364316 0 0 0 0 0 0 0 0 5.58196110587508e-05 0 0 0 0 0 0 0 3.7277544297104e-05 6.280203911926e-06 1.55556081544161e-05 NM_001034497.2 SLC25A34 Bos taurus solute carrier family 25, member 34 (SLC25A34), mRNA. 1e-29 134 85.12 0.155239327296248 0 noncoding TAAATATCGCCTTTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGCTCGAACCTGGGTCTCTTTGCATTGTAGACAGATGCTTTACCCTCTGAGCCACCAGGGAAGTCCAAGGAGAACATAAAATTTCAAAGTCGCCCTTCCTTGCCTCTTAAACAGAAGGGCAAAAGTTAATCACTGGAGACCTTTATCAGCCTGGAGACTGCACCAGAGTAATCTAATAAAAAAAAAAAAATTAACTGATTAGCCTTTACTGTTAGTTTCCCATCTAATTGCCTTGCCATAATGCTGCCTCTAAAGACTTAGTCCTTTTATCACTTGTGTAGAAACTTATTGTTCCTTTGTTAAGATGCTGTATAAGCCCAAAATCTAGTCACCGAACTATTCGTTTCTGAATTTCTCTTTGATTATATATAATACATGTAACAACAAAAACGTTTTTCCGTTCTTAATCTTTTTTACTACAGAGCCCCAGCAGAAACGCTAGAAAGAAAAACCTTCAACTTCTCATGTCCAACTATTTCATATGGTCTCATAGAGAATCTACTGACATGCCTTTTCCGTCGGTGTTTTCAGACATAAGGGAGACCCAACATTTGCCATTTGTATAGAGCTGTGACAGTTTGAGAGAAAATCTTAAAAAAACAAAACATTCTCTAAAATACCAAGAACCCGGTTTAGTATTCACAGAATTTAAGGCAATTGATTGTTTCCAGTTTAGTCCCAAGCTCTCTCGTCTTACATTAAAAAACAAACAAAAAAAAAAACAACACCT TCONS_00224546 . 5' 456 TCONS_00224546 . 5' 456 EMBV3_33355 GACTCCCTTGAAATCAACCATTTCTACTGTGCTGATCCTCCTCTGATAATGTTGGCCTGC Gene GeneID:781516|LOC781516:XM_002683799:4_cdna Constitutive 0 NULL GeneID:781516 23 GENE LOC781516 NULL similar to olfactory receptor, family 5, subfamily M, member 10 EMBV3_13598 GCCATATCTCGTGACCGTGTGTAGTGCCAGCACAGCTTATGGCATCTCGTTGAGGAAAAA Gene GeneID:614712|THY1:NM_001034765:225_cdna Constitutive 0 NULL GeneID:614712 15 GENE THY1 MGC128895 Thy-1 cell surface antigen EMBV3_40641 TGGTGCGTACTCCCCCACAATCATACCTGTGTCCTCCTGCAACTGTGGTTTAGAACTGCA Gene GeneID:531927|FARP1:XM_002691965:15_cdna UTR3_Alt 3 NULL GeneID:531927 12 GENE FARP1 NULL FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) EMBV3_12621 AGGAAAGATGCCTATAAAGTCTGAAATAACTAACTCCTCCATGCTGGCATGTGTGATACG Gene GeneID:281574|EZR:NM_174217:1_cdna Constitutive 1 NULL GeneID:281574 9 GENE EZR VIL2 ezrin EMBV3_39327 CCAAATGCCAAGGGCTAAAGTGAAGGGAAAAGTTTATGGACATGCTCACAGTCGGAAGGG Gene BVV0102_160646 + 0 NULL GK000012.2:69576661-69614374 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30392 GAGCAACATTCCCAACAGCATCTCCAAGCTCCCCAAGCTGAAAAAGCTCAACACAAAGCG Gene GeneID:767998|LRRC18:NM_001077058:44_cdna Constitutive 0 NULL GeneID:767998 28 GENE LRRC18 MGC134008 leucine rich repeat containing 18 EMBV3_30198 CTTCATGTACTTTGGGCCAAAAGCTTTACGGTTTGTCAGTTAACAGATGAACAGATCCAT Variant GeneID:515343|NEIL3:NM_001034490:14_cdna 342^690 1 EMBV3_39512 GeneID:515343 27 GENE NEIL3 MGC127868 nei endonuclease VIII-like 3 (E. coli) EMBV3_33263 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33670 AGGTCCCCTCCCTTTGCAGCCCCCATTGGAGTAGGGATTCCATGTTGGGTTTACTTAGAA Gene GeneID:540803|MRAS:NM_001098118:69_cdna UTR3_Alt 2 NULL GeneID:540803 1 GENE MRAS NULL muscle RAS oncogene homolog EMBV3_02139 GGATTGCTAGAGAAAAAACACCTTCAAAATATGAAATACAAAGAAATAGCTTAAGGCAGG Gene GeneID:510078|ZNF354A:NM_001075429:20_cdna Constitutive 1 NULL GeneID:510078 7 GENE ZNF354A MGC143044 zinc finger protein 354A EMBV3_26881 GCCTAAACTAGGCTCAGCTGTAGGGGATAGGATTTTTACAGGTTGCAGGAGAAGGATAGG Gene BVT0101_046311 - 0 NULL GK000030.2:101532924-101747193 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245323 TCONS_00245324 TCONS_00245322 1 XLOC_150688 Coding TCONS_00245324 XLOC_150688 Coding Coding FAM123B X:101508517-101537034 o TSS184173 7551 1 TCONS_00245324_12 1119 3 0.735306494599523 0.000651869972241955 4.70911527988421e-10 0.000211405488851494 0.000615849440839597 0.000395466823671836 0.000285255378005577 0.000523868769389208 0.000118368696652408 0.000375785346853194 9.68610333983395e-07 1.04159739475461e-12 0 6.07637245528469e-06 3.20814332216184e-05 0.000108276505140769 0.00187238551697481 0.000105837225819468 0.000588127160731778 1.85700460758287e-05 0.000135414266498766 0.000518373267205778 0.000118600088134854 0.000341657949238944 0.000703786698571726 0.000210618832662215 2.6696207362234e-10 3.70543494818607e-05 2.16166144207091e-05 3.59987995261203e-05 1.13169575060658e-05 XM_584347.3 FAM123B PREDICTED: Bos taurus family with sequence similarity 123B (FAM123B), transcript variant X3, mRNA. 0.0 6917 100.00 0.507747318235995 NM_152424.3 AMER1 Homo sapiens APC membrane recruitment protein 1 (AMER1), mRNA. 0.0 4652 85.69 0.523241954707986 TCONS_00245324_12 sp|Q5JTC6|AMER1_HUMAN AMER1_HUMAN APC membrane recruitment protein 1; 0.0 1660 82.59 0.999106344950849 0 coding 1 1 1 1 0.111191632743623 0.613961792649918 0.00517372174307434 0.92473573243419 GGGGTATGGGGGAGCAGTCCAGAGCCTGGGGAAGGGGACCTGGTGCAGGAGGTGACTGGAGCCACAGCGGCGGCAGGGGCGGCGGTGGCGACGCTCTCAGCCGTAGCAGCCAAGGCTCCAGCTCCGGCCAGTGCGGCGCAAGAGACAAAAACCCGGCTGGAAATCGGACAGGGCCGGCCCCAGCTGTGATGCTTCCTGACTGATGATGTTATAACAGTGCCGAGAAGCCAAAAGGCTGCATTTTTTAGCTGAATACACCTGAGTTTTCCCCACCATCATGGAGACCCGAAAGGATGAAGCTGCTCAGGCCAAGGGAACAACAGTCTCTATGGATACCCAGGATCAAGGGACAGAGAAAGGGGCCAAAAACAAGGCATCTGAGACAACAGAAAGGCCCACATCAGAGCCACCCTCATCTGGTCCAGGTAGGCTGAAGAAAACTGCCATGAAACTCTTTGGTGGCAAGAAGGGCATCTGTACCCTGCCTAGTTTCTTTGGAGGGGGACGAAGCAAAGGTTCTGGGAAAGGCAGTTCTAAGAAGGGTCTTAGCAAGAGCAAGACCCACGATGGCCTGAGTGAAGCAGTCCATGACCCTGAAGACATTGTCAGTGAAGGAACTGGCCTCTCCTTACCTTTGCCTGAGTCATCATGCCAACTTCCCAGCTCTCAGAGTGTCCATGGGTCTTTGGAGACAGACTCCAGATGCAAGAGGTCTGTGGCTGGAGCCACAGAGAAAGCTGGGGCTGAGAAGGCTCACTTTGTGCCCAAGCCAAAAAAAGGCCTGAAAGGTTTTTTCAGTAGTATCCGGCGTCACCGGAAGAGCAAGGTCTCTGGGGCTGAGCAAAGCAATCCAGGAGCCAAGGAGTCTGAGGGGGCCAGAGCAAGGCCTCATGAGTATGTGAGCTCAGCCCTTCTGTCCCACGCTGATGAGGTCCTCCAAGCCCCAAGAAAGGAAAATGCCAAATTTCAAGATGTCCCTGGGCCGAACATTCCTTCAATATCAGAGACTTCTCTGGCAGCCACTGAGAAAGCAGCCTTTAAAGATGCAGAAAAAACCTTGGAGGCCTTTGTCTCAGCATTCTTGCAGCCCAAACCTGCCCCTGAAGCCAGTGGCCCAGAGGAGTTCCATAGTCCAGAAACAGGGGAGAAGCTTGTGGCAGGAGAGGTAAATCCACCCAATGGCCCTTTAGGGGACCAGCTGAGCCTCCTCTTTGGGGATGTCACATCTCTGAAGAGTTTTGACTCACTGACAGGTTGTGGTGACATAATAGCAGAACAGGATATGGATAGTATGACAGATAGCATGGCCTCTGGAGGCCAGAGGGCCAACCGAGATGGAACCAAACGAAGTTCCTGCTTGGTGACCTACCAAGGAGGGGGCGAAGAGATGGCCTTGCCTGATGATGATGATGAGGAAGAAGAGGAAGAGGAGGTGGAATTAGAAGAGGGAGAAGAAGTCAAGGAGGAAGAAGATGATGATTTAGAGTATCTGTGGGCAAGTTCCCAGATGTACCCAAGGCCCATACTAAATCCAGGCTACCATCCCACAACATCCCCAGGCCATCTTGGCTACATGCTTCTTGACCCAGTTAGGTCTTATCCTGGCTCAGCCCCTGGGGAACTTTTGACTCCTCAGAGTGATCAGCAAGAGTCCGCCCCCAATAGTGATGAGGGTTATTATGACTCCACTACACCAGGACTTGAGGATGATTCAGGTGAGGCCCTGGGGCTTGTCCATAGGGATTGCTTGCCCCGAGACAGCTATAGTGGTGATGCCCTCTATGAGTTCTATGAGCCAGATGATAGTCTTGAGAACTCCCCACCTGGGGATGACTGCCTTTATGACCTCCATTGTCACAGCTCTGAGATGTTTGACCCCTTCTTGAACTTTGAGCCCTTTTCTTCCCCTCGGCCACCTGGGGCAATGGAGACAGAGGAAGAACGGCTAGTAGCCATCCAGAAACAGTTGCTATATTGGGAGCTTCAGCGGGAGCAGCGAGAGGCCCGGGAAGCATGTGCCCAAGAGGCTCACACCAGAGAGGCCCATGCTCGAGAGGCCCACACCCGAGAAGCTTATGTCAGAGAGGCCCGACCTCGAGAGGCCTACGCCAGGGAGGCCTGTGGCCAAGAGGTCTGTGGTCGAGAGCTTCAAGTCCGAGAGGCCCAGGTGCGGCAGGAGAAGCCCGTCATAGAGTATCAAATGAGGCCTTTAGGCCCATCAGTGATGGGTCTGGTGGAAGGGGCATCAGGGGCCTCTCAGACTTCCCACAGAGGAACCACATCAGCTTTCCCTGCCACTGCAAGCAGCGAGCCAGACTGGAGGGACTTCCGTCCTTTGGAGAAGCGTTTTGAGGGAACCTGCTCCAAGAAAGATCAAAGTACTTGCCTGATGCAACTCTTCCAGAGTGATGCTATGTTTGAGCCAGACATGCAAGAAGCAAATTTTGGAGGATCTCCCAGGAGGGCCTACCCTACTTATTCACCCCCTGAGGAGCCAGAGGAAGAGGATGTTGAGAAGGAAGGGAATGCTACAGTGAGTTTCTCTCAGGCCCTCGTGGAGTTCACCAGCAATGGGAACCTCTTCTCCAGCATGTCCTGCAGCTCTGACTCTGATTCGTCCTTTACTCAAAACCTTCCTGAGCTGCCTCCCATGGTGACCTTTGATATTGCTGATGTGGAACGGGATGGGGAAGGCAAGTGTGAAGAAAACCCTGAGTTCCACAATGATGAAGACCTTGCAGCCTCCTTGGAAGCTTTTGAACTGGGCTACTATCAGAAACATGCCTTCAACAACTACCGCAGCCGATTCTACCAAGGCCTACCCTGGGGTGTGAGCAGTCTCCCTCGATACTTGGGACTACCTGGCATGCACCCTCGTCCTCCACCTGCTGCCATGGCCCTCAGCAGGAGGAGCCGCTCCCTTGACACTGCTGAGACCCTGGAGCTGGAGCTCTCCAATTCTCACCTGACCCAAGGCTATATGGAGTCTGATGAGCTTCAGGCCCAGCAAGAAGATTCAGAAGAAGAAGAGGAGGAGGAAGAATGGGGCCGAGACAGTCCCCTATCTCTCTATACTGAACCTCCAGTAACCTATGACTGGCCTGCCTGGGCTCCCTGTCCTCTCCCAGTGGGGCCTGGCCATGCCTGGATAAGTCCTAGCCAGTTGGATGGGCCTTCTAGCCATCCATTTGGGCAGGCAGTCTGTTGCATATCTCCTTTCACCATGTCAATGTTGCTCTCAGTATCAGGGCCAGAGCCAAGAGCACCTGGGGAATCCAAGTCTCAGCTAGCTCGGCCTTCGCACCTACCCTTGCCCATGGGCCCTTGTTATAACCTCCAGCCAAAGGCCTCCCAGAGTGTGAGGGCCAGGCCTCAAGATGTGCTGCTGCCTGTTGATGAGCCCAGTTGTTCCTCCATTTCTGGAGGCTTCAGCCCTAGCCCTGTGCCCCAGGCCAAGCCTGTGGGCATTACTCATGGCATCCCTCAGCTGCCCAGGATCCGGCCTGAGCCCCCAGAGCCTCAGCCCATTCACTATGGGGCTTCCCGCCTTGACCTGTCAAAGGAGAAGGCTGAGCAAGGTGCCTCTCTCCCCACCAGCTGCTCCTCCACTGCTATGAATGGAAAACTAGCTGAGTAGTCATCATCAATTCTGGAGTGAGGGGCATGGGGCCTGAGCATGTGAATGGGGATCAGGGTTGGGCAGAGGGGTGGGGGTGGCGGTTACTGTTTAACTTGAAAATCCTTTTGGCCAAGGAAAGCTCCTATGAGTTTTCACCTTTGTTTTCCCACTTCCCTTCTGTGGCCACATTCAGCTCAAGTACATCTGCCCTGGGAGATTGCTGCTTCTGTGCTCCAATTTTTGTTTTTGGGTTTTTACCTTGTGACCCATGCAGGGTTAGAAATGCTCTAATTTTGTGCCTATTCCAATTGCCAAGGTAGTGATTTTATATATGTATAAAATCTCTGCCATTTTTCCATCCAGTAGATGAGCAGCCAAGTCTACACTGCCTCCCACTTGGGGACAAGGAGCTTGTTTGCTATTAGCAGTGTAAAATTATGGTACAAATCCTACCCACTCCCACTTCCTTTGGTCTTGGCATAGCTGCCACCATCACATCAGATAGTATAATCTAGTAGCCCCAGCTAGCTGTCCTCAGAGAGGATCAAGTAGCATGTGTCACACTGCCTGTTGCTATGGACTTAGGTATCATAACCAGCGAGGGTCTTTTAACCTGGCCTGCTATAGCTTGGGTTGAAGACAAAAATGCTAATTTCCTTAATGTAATGACCAAATTCATCTAGTTGCAAACAAGACAGGGTTATATTGTAGACACTACCATAGGTCTTGAGCTCCAGAATGATAGGATGTTTTTTCCTTCTTCGTTTCTTTAAGCTTGTGACAGCCTGAATTGCAGATGCTTTTGAATTTTGGTTCTTTTTTTTTCTCCAAAGGAAATTTTCGTTATCTCATTACAAGGAACACATTCTTTTAATCGAGATACGGGAAGAGAAATGGCCTAAACTAGGCTCAGCTGTAGGGGATAGGATTTTTACAGGTTGCAGGAGAAGGATAGGAAAAGGAATTCATTCATTCTTTTCACAGAAGAGAGGATTTCATACATTGCAGAGCTCATGTCAACTCAGCTTCTTAAAAGGGAAAATTGCTTTCCCCCAAAGACAAAAACTTCCTTAAGCCTTGCCCACCCTTTCACTGGATGCTTTAAAAAGGCTTCATGCTAGCATTCCCAAGAGACAGGACACCAAGGGTATTTAGGTTACTGTTCCAGTTTTTCTAAAGAGCCTTCATTTTCCAATTAGCCAAGTTCTTAGTATCATCATAGGACTGGGTGTCTTGAGAGGAAAGACTGATCTGCCCTCAGTCTGCCAAGCTGAAGGACTCCGATTTGTGTGGTAATTGCAGCTCCTTATGGAAAGAATGGCACCCTTATTTCTGCATTCACACAGTTTTCATGTTAAACTAGCTTGGAAATATTGGTGAGGAAGAGTTGCTGTCAGGAAGACATTGCAACAGGCTAATCTTACCAGGCTCTATCTCTCATTAATCACCAATACGGAGGGGTCCTTTTAAATTTCACCATTGGAAATGGTATATGAAACTTTTTACCTAGGCATGTTGACCCAAATTATGATCCTTGCTCCCTTGATCCTGTCCCCATCCTCCACCCATCTCCATGCCTATTAAGAGGCAAACAGGGCTCTTGGTATTCCAGAAGAGATGCTGTTGCCTGCCACCTGAAGTTGAGATGACTTTGTGGGAAAACTGCCCCTTGGCCATGGGATGTGTGTGCTGGTCTTTGTCACCATTTTTCGGATTGGTGTTGGCCCAGTGCCCATCCCCACAAAAAGTACACCTGGATGGTAGAAGGTGTACCCCTGGAAGCACCACATGAATTTGCATGGCACTGACACCAGCACTCAAGGGATGACTTTGTCTGCATTGTGAAGAAATCTGTCAGTCATGAAGCTGGAGAATCAAAGAAGGGCAGCACAAGCTCCTGTTTGTATGTAGACTGTGCCAACCACAGCAGGTAGTAGAACCATCACCAACCACCAGAGCCTGCTGGATCACCAACCTGTCTGAGAAGAGAAAAAGTAGGTGGTCAGCTTTTGGCCAAGGGCTGAGAGCTACAGTCTCTAACAAGAGGGCAGCAAGAGGTACCACCTCTGAAGAGGGCAGTCATAGCCCTGACACACATTGCTGGGCTTTGGAAGGTCTCATATCACAGTAAGTTTTAGGACTGAGCATCAGCTCATGCTTTGAACACTGCTGCCTGCAAGTCCTTTCACTGTCCTGGCCAGCCCAGAGATAGGATCCTCACCATCAGAAATAAGGCAGTCAGGGTGCATGGCTGCAGAAGCAGCCTCCTTTGAGTCTACTCTAGATCCAAGCAGTTCATTTCTGAATCCCAGCTGTGGCCTAGAAGAGGAAGGAGGACCAGCTGGAGACTTGTGTGGCAGCACAGGGTGACACTGGGAGAGCCAGCCAAGCTCTAGGCCTCTCCCCAAACATACACCAGTGTTTGCTTGGCTAACACCAAATATGTCCCAGACTACTAAATGTGTAGATGTTAAGTCCACAAATGAACACCATTTCAGCATTGCAAGGTCAATGTTTTTGGATGTGACTTCACAGGAAGGTACGACTTGAGAGAAGGTGACTGCTCTTAGCTATCCAGCAAGCAGGCTTATATATAGTGTCAGATAGCTCTGATCCTGAGAATTTCCAAATGAGACTGATCCTTAGGGGACCAATGACTGTGGATAGAGAAGACCACTTAGAATGTCTCTCCCAGGGCTGTCAGTTTCTCTGTTTTAACGTCTTCAAGGAAGCCCTGCCTTGGGGCTCTTTTAAGGCCTGCCCCAATCATCTGGACTCAACTTAGGCACCAGTCCACGAGCCTTCTGGGCCAAAGGCTTTGGTCAACACCAGTCTTTTCTCCCTCAATACTGTACCAAGGAGGGAAGTAGCTTCCCACACCCAAGGTGCATTCCCCTCATCCTGCTGCCAGTGACTTTCCTACCCTTGCCACTGCTACCACCCCACCTGCCCTCGGCCCTCAGGCCCAATTGCTAGAGGGAGACGGGGTTTAGCAGGGAGACTTCAAGTTTACCCATGTGTATGTTGCATCCAAGTTGTTTTTAATATATATATATATATATATATATATATATATATATCTCAAAAGTCAATTATCTATTTTTGTATTGTTTGCATTTTATATTCATGGAAAACAATGTATCAATTGTTCTTTTCTGATATATTTTATTTTTAAGCGGTGCTGTTTACAGTTTTAGACAAAACGAAGATGACACAAAAATTGCTGCTGCTTGTGCAGAGGGCTGGTATCTCAATTGCCCAGGACCCTCGCTCTTTCCCCTCTCCCCATCACTGATGTATCGCACTGTCCATCCCCTCCCTCCATGATAGGGACAGCATAAGATGCCCAGGTATTAAGACAAATGCCAGGTGACTCAGGCATGTGGAACCTGATAGATAGCATGTCTTTTTATGGTTTTATTTTTTTCTTTCAGACTCACCTTTCCCTGTGTGTAGATCTTCTAGAAGTACTCATGTCTGTGTCTCTCTCCTCTTTATGTTTTCCGCTCTAGTTTTGAAACCAGAATGCCCATGTTTTGCTATTTGTCATGTTGGGTTTCTCCAAAGAACATTTTGGGGGTATTCTCCACCCAGTAAGGAGGGCAGGAGATTTCTCAACTATTCCCCCTTTCCCCAAGAAGCTGGGGGAGACAAATGAAAGTGATGCTTGAACCATCAGGAATTAGCCATCTCATTGAGGAAACCCTTACATGGGACTTTCCAGGAGCTCAGTTGATTGTGACATTCACCCAGAAGAGACGTTGGGGAATTCCTTGATCCCTCTTGCTGCTTTCGGGGAATCTCTTCCTCTACCACCATTCCCACTCCCCTGCTGTGCTCCAGCTCACACATGGATGGAACTTTGGGGGAACAGTGACTATTAGGGTGATGGCTTGCTGGCCTGATTCCCTACTTTTCCATTATATAGTCAC TCONS_00245326 s 5' 0 TCONS_00245325 s 5' 210 EMBV3_27058 GCAACGTGAAGTCTCTGGAGAAGGTGTGTGTTGACCTGATCGGAGGCGTGAAGGAAAAGA Gene GeneID:614945|LOC614945:XM_002690986:268_cdna Constitutive 0 NULL GeneID:614945 10 GENE LOC614945 NULL similar to ribosomal protein S20 EMBV3_10789 CGTGAACTTCCCAGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGAAACTACGACCAG Gene GeneID:539692|SPATA22:NM_001038186:153_cdna Constitutive 2 NULL GeneID:539692 19 GENE SPATA22 MGC134099 spermatogenesis associated 22 EMBV3_04416 CATACCAGCCGACAGCCTACCTGGTGTGATCCCCTTCAGCACCCGTTTTCTTGCGGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08031 CCGCAGCCAAGGTGTTTGTCCCTTACTTTGAGTCTTTACTGTGGTTTCTGTCCAGTCCCA Gene BVT0102_141037 - 0 NULL GK000011.2:97608143-97651101 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026047 TCONS_00026045 TCONS_00026046 TCONS_00026049 1 XLOC_014912 Coding TCONS_00026049 XLOC_014912 Coding Coding ZBTB43 11:97582127-97610879 j TSS18780 5589 1 TCONS_00026049_3 498 3 0.805711105700671 4.86422606098449e-07 0.0020530916332311 0.00202771061761005 0.00170490138446758 0.00140560185980001 0.000876353562990284 0.00161371737003641 0.00184803630829814 0.00246599758617876 0.000431814133563824 3.15418413783804e-05 0.000120825180890091 0.00065799984122211 0.000493587787952875 0.000929971238928549 0.000553077215634994 0.000453647751585393 0.00024278904781685 0.00162077366306121 0.00159028242437319 0.000682892927180719 0.000168758343879762 0.000348507070710751 0.000145838187348768 0.00185110447168408 0.00288817059181245 0.00127298525016193 6.9913885213813e-05 0.00017998239470684 2.62616833907755e-05 XM_005213121.1 ZBTB43 PREDICTED: Bos taurus zinc finger and BTB domain containing 43 (ZBTB43), transcript variant X1, mRNA. 0.0 9927 100.00 0.984612631955627 NM_014007.3 ZBTB43 Homo sapiens zinc finger and BTB domain containing 43 (ZBTB43), 0.0 4064 80.44 0.786902844873859 TCONS_00026049_3 sp|O43298|ZBT43_HUMAN ZBT43_HUMAN Zinc finger and BTB domain-containing protein 43; 0.0 965 98.07 0.933734939759036 4 coding 0 0 0 0 -0.0425874575995072 0.764924190768765 0.0179208567627964 0.784514816235714 GGTTCTTCCTCGTGTGGATTGAATTTGAGGCCTCTTAAAAATTCTGTCAGGAAAAGCACCAACAAGATTTGTGATGAAATGGAGCCTGGAACAAACTCTTTTCGAGTAGAATTTCCTGATTTTTCCAGCACCATTCTGCAAAAACTGAACCAGCAGCGCCAGCAGGGACAATTATGTGATGTGTCCATTGTTGTCCAAGGCCACATTTTCCGAGCACACAAAGCTGTTCTTGCTGCCAGTTCCCCCTACTTTTGTGACCAGGTACTCCTGAAAAACAGCAGGAGGATTGTTTTGCCTGATGTGATGAATCCCAGAGTGTTTGAGAACATTCTCCTGTCGAGTTATACAGGGCGTCTAGTAATGCCTGCTCCAGAAATTGTCAGTTACTTAACAGCAGCAAGCTTCCTCCAGATGTGGCATGTGGTCGACAAATGCACTGAGGTTTTAGAAGGAAACCCTACAGTCCTTTGTCAGAAGCTAAATCATGGCAGTGACCACCAGTCTCCAAGCAGCAGCAATTACAATGGCCTGGTAGAGAGTTTTGAGCTGGGCTCCGGAGGCCACACGGATTTCCCCAAAGCCCAGGAACTGAGGGATGGAGAGAACGAAGAAGAGAGCACCAAAGACGAGCTGTCATCTCAGCTCACTGAGCACGAATACCTTCCCAGTAACTCATCCACAGAGCATGACCGGCTGAGCACGGAGATGGCGAGCCAGGACGGGGAGGAGGGGGCCAGCGACAGTGCCGAGTTCCACTACACCCGGCCCATGTACAGCAAGCCCAGCATAATGGCTCACAAACGCTGGATCCATGTGAAGCCCGAGCGCTTTGAGCAGGCGTGCGAGGGCATGGATGTGCACGCACCCTATGATGAGCACCAGGTCACAGAGTCCATCAACACCGTGCAGACAGAGTACTCAGTCCAGCCCTCGGGGGTAGAGGAAGACTTTCACATTGGGGAAAAAAAAGTGGAAGCAGAGTTTGACGAACAGGCTGATGAAAGCAATTATGACGAGCAGGTGGATTTCTATGGCTCCTCCATGGAAGAGTTTTCTGGAGAGCGGTCAGATGGGAATCTCATTTGGCACAAACAGGAGGCTGCCCTAGCATCAGGCTACAGTGAGAATATTGAGATGGTAACAGGGATTAAAGAGGAAGCTTCCCACCTAGGATTCTCAGCCACTGACAAGCTGTATCTTTGTCAGTGCGGCAAGAGTTTCACTCACAAGAGTCAGAGAGATCGACACATGAGCATGCACCTCGGGCTCCGGCCTTACGGCTGTGGGGTCTGTGGTAAGAAATTCAAAATGAAGCATCATCTCGTGGGTCACATGAAAATTCACACAGGCATAAAGCCATATGAGTGTAATATCTGTGCAAAGAGATTCATGTGGAGGGACAGTTTCCACAGGCATGTGACTTCTTGTACCAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAATACGACTGAGGCTTGTACCAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAATACGACTGAGACTTGTACCAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAATACGACTTGAGTGGCAGGCACAAAAATAAACTGTGGTAATTATGCAAATCTGGGCACAGATGATGCGTGCTACTTGCTATTATGAGAGAAGCTTAAAAAAAAGGAAGATATTTCTGCAAGACCAGTTCTAAGTAGGCCAATTAAAAAATCTAATTCTTCAAATTTGTATGTTCCTGGCCTGGAGTGGCTAAAGGGGATAAGTGCACCCACCTCACACCTGGCAAGGTGAACCTTCAGGCCTCTTGAATGAAGCTGGTGGACTAGAGGGTAGAGACACCTGCACTTGGAATTGGACTCCAACCCCCCAGTTCCGTTTCGGGTGGCAGCGGTGTTTGATCAGTCATTATTACAAGGTCATATTGGAATTTTATTTTGCTCTTACTATAGATACTTAGGTAATGTGGGTTTGTTTTGGTAGCTGCTTCACTGAATGAAATGCTCCTTATGTAATAGCTACAAACAATGTGATTTCTAGGATACTAAGTTGATTAACAGAGCTCTTTTATCTGGTTTTGTTCTTTCTAAAGAGTATTCTAACCAAAACTATGGAGATTATTAAGAGGGTGACATTCTAAGTAAAAAAAAAAAAAGTAACTCATGGTACCAGCTCCAATTTCTGTAAGATGCCACTGTCACAACGATTTTCAGACTCTTGATAAGTCAGAGTTTTATATTTTAGTACTAACATTTAGTTTGAACAGTTGTTTCTAATTGTAATTCTCTAGGGTGCCAGAGATAGGTATTTCTAACTGGTTTGCTGTCCCAAATCCTGTTTGTTTAATTGTAGCATCCACACGGTGGAATCTGCTGTGGCTAGTAGACTTCTAGCCTGCCTTGACTCTGACCACGGTACCATTGGCTGCTCCAGCCCATTCACTCTGTCTTAGATTATGGTGCTTCCTGAAGTGGTCAGTCAATGACCAGTTACTGGGAAGGAGCTGGAAGCCACAGCTGAGAGTTACCTGTGAACTTCAGGAGCCTATAGAGTGCTACAGTGACACTCCAACTGTCAGAATGAGAGCCGCCAAGTAGCAGAATTTTGAGTGTCAGGTTATGGGGACGAGGGGAACCAATTGCTCAAGAAAAGGGGAGTTTTGAAAATACACTGGTAGAGATACTCACAGAGGGGTACGTTGAGCTGGTCCTCCCAGCTCTTTAGGAGTGCTGGAATGTGTTTTAAAAGAGGGAAAGAAAGAGTCCTAATTTTAGGAGGTTGTCTGCAAATTCCTGTTCTCATTTAATAGATAAAGCTGCATAAATTTACAAGTCCGTATAGCTATACCTACCAAAAAAAAAAAACCCAAGAAAATTAGCTATTCTGAGACCTTTTCTGAGGATCAGTCAGAAGTTTGGGATTAAAAAAGAAGCTTGTTCAGGATGTTTTAAACTGTAACATACCTGAAGCTGTCACCAGGGTTGGGACAGGGTGCTACTGTTATGTTAACTTTTCCATAAACTTAATAGTTTATTATTTCTTAGTGGAAACTTTTTTTTTCCTGAAAACAAAAATAACTTTTCTTGGATTTGGAATGAAGTTTTTGTTTTAAAAGTTGGGCATTGCTCTGAAATGAGTGACTTTCCTGGCAATGGCCTCTGATCCTCAAACTCCTACCTTCAAGGCATTTAGTTGTATGGAAAGGGGAAAGATTTACTTACCAGTTAACGCTTGTAATCGAGGTTACAAAACAGGGATCTATTCATTAACACTGTATCATTCTCAATATATAAAAAGCACTTTGTATTTAAAACTTTATTATAAATATATATTGATTTTTTTAACCTAGAAACTAGATATTACCTCTTGGTTGTTTGCCATGTTAATACCCTCTTCTCTTAGTGTTGAAACTTCACCAGTTAACAGTCATTTCTCTGTGTACCGGACAGAGAATGTAGAGGTGACTTATAGCCAAGCTCAGTTGCTGCTTCTCTTTCTCATGTTAGAAGCATTGGGTTTTAGGTATGATCCCAGCCATTGTATGTGAGGAAAAATTGTTGTATTCCTTCTACTGATTTCAGTACTAAGGCAGTGAAGCCATTTTGTTCGTCCAAAAGCCAGTCACCCTCTCTCATAGTATCAGCAGACCATTTCTGCCTGTTTGGAAGGTTTGATGTGCTGGTTTCTATTAAAGATTGTACTCAAATGAGTGTTGGAACACTTGGGAAGAAGAATCTTGAGAGGTAAAATAAAAATATTCTGGAACAATCTCATGGTCCTTCAGTTATGTTGAGATCAGCACGGCAGTCGTTGTGAGTAATGAGGAGGAGGAGGACAGGACTAGGGGGCAGCTCTCTGGTGGTAGTTTTAGAAGCTCTCAGTTGTGCTGGGACTTCATGTGTTATGAAGAGAAGCAGATCTTCTATTGAAATCCTTATGTGTACACCTGCTACTAAATGTAGAATATAAATGTAAGTTCCTCACACCTGCTGTTTGAAGCTTTTTATGGTAGTGGGGTTTTTATAAAAGTTAGAGTTGCTGATCAGTCAACCAGACCCTGTGACATGATTGGGCATCTGAAATGCTGGCCATGTCCAGAGAGGCGGGGCAAGGGGGTTGCCTTAGTTTGGATATTGAAAGTGAATCTTTATAAACTTTGCTTTTAGGCTTAAGAGATCATACTGTATTACTACTTTTTTTTTTTTCCTCCTGCCCACCCTGGGTTGGACAGATAGTCTCTGTCTTTACCCTCAGTACAGCTTTAGAAAATCTTTCTCCTTCCCGTTGAGTTTGGAGAGCAGTGGGTAACGTTTCCAAACAGTCTTTCAGGGATCTTGTCAGTGGCCCGCAGCCAAGGTGTTTGTCCCTTACTTTGAGTCTTTACTGTGGTTTCTGTCCAGTCCCAATGGGAAAGGGCTTGAAGGCACCACCAGTGGTCTTTAATATTCGTACTGATGCTATGCCTTTCATTTTAGATCCACACATTACAATAATCCACCTGGTAAAGTAGGTCTGACCAGTTGAGAACAGACTGCCATAACCTTTTCTCAGCTGTTGAAGGTTACCCCCCAGTCCCTTCTTTTGGCCGCTGGTCTCAAAGAGTCTGCCTGAAAGGGTCTCCTCCGCTGTAGTGGGCATTTGCTGAACTGAACTGACCCTAAGCTGACTTCTGACTGACTGGGAAAGCTGCTTAGTCTCAGTGGCATCTTCCTACGGAGGCACACACCTTCTCCTGAGGCTGCTGTGGACATGAAGTTGGGGCTGAGCAGAAGCAGCAATGCTGGCTTTCCCTGGGGAGGGGGGTTTGCTGCGCCCCCCGCCCCGGGGCGGGAGGGCAGGGGAGGGTAGAGAGGATGCCATCACACCAACTTCAGGAGTTTGCTTTCATAAGGTCTCTGGATAATTTAGGAATGCTGAACACCAAGCAACATAGACCCCCACCCCTCCAGCCCTTCTGTGCCACACTAATTTTGTGATTTAGGTTGCTTTTCTGTGACTCACTTTGTTCAGTGAAACCAGGGTGTTTGTTTGGGTTTTTGTCTTTGCCTACTTATGTATTCGAAGGTACATGTTTCTTATTTCAGATTTCTACTGATAGTGCCCAATGGGAAGATGCTGGAACACATTTTGCAAATGTGATTTTTTTTTTTTTAGTTTTGCTTGAAGCCTGTGTCATAATGTCAATTGCTGCTGCCTTCTTTCCTTTTATGAGGTTCCCAGTGTTTCTTCTAGAAAATTATTTATGCAAGTCAGGTGACTCTTAGACCACAAAACCATTTGACAATAAACAGAGTATCATTAGGTGCATATCTTATTGATATTTTGTGAAATGTTGTGCCTGTGTTGCAAAAGTTGAATAGTTTTGTCTTTATATACTGCTGTCTTCAGTGTACAGCATGGTTTTACTTAATTGAATGTTACTGTTTAATATTTTCTTCTTATAGAAGAGACCATGCCCTTTTGTATGACATGTTTTAATAAATGTTATCTGTCAACTTTGTAAAAGTTTTGTTTTTCACTCTGGATATTTGACCACAAGTCTTTGTTTTCATTCTGACCTTTGCCACCTGAGAATAAAAGTTATATTGT EMBV3_04633 CAGAGCGGGACACACAGACTGGAGCCAGGGCGTGCTCCCACAAGGACTTTTAATTGTTTA Gene GeneID:618306|MPG:XM_002683809:29_cdna Constitutive 0 NULL GeneID:618306 25 GENE MPG NULL N-methylpurine-DNA glycosylase EMBV3_27354 TGTGCACAAATTAGGGGTGGGATGGTGTGGGTTGCACTGACCTCCTTTCCTGTCTGCAGA Gene GeneID:538631|TUBAL3:NM_001103285:6_cdna UTR3_Alt 2 NULL GeneID:538631 13 GENE TUBAL3 MGC165684 tubulin, alpha-like 3 EMBV3_07506 TTGGGATATCAAAAGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCGGCAGCCA Gene GeneID:100298336|LOC100298336:XM_002686769:76_cdna Constitutive 0 NULL GeneID:100298336 4 GENE LOC100298336 NULL similar to membrane associated guanylate kinase, WW and PDZ domain containing 2 EMBV3_22265 GATCTCCTGCTCTCCAAGTATGGCATCTATGTGCAGGCCATCAACTACCCAACTGTCCCC Gene GeneID:511791|ALAS2:NM_001035103:23_cdna Constitutive 0 NULL GeneID:511791 X GENE ALAS2 MGC128330 aminolevulinate, delta-, synthase 2 EMBV3_40884 TCTCTACTCAGGGGCTCCCAGAAATGGAACTGATCGAAGCAGACTTTTCAGATGGTGCAG Gene GeneID:526525|F2RL1:NM_001046283:15_cdna Constitutive 0 NULL GeneID:526525 10 GENE F2RL1 MGC138000 PAR2 coagulation factor II (thrombin) receptor-like 1 EMBV3_24973 TACACTTCCTCTCCAGTCAGAGCAAAGGTATCCAAGAAGTACAATTCTCTGAGATGGCCC Gene BVV0102_205511 + 0 NULL GK000009.2:37026572-37505988 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14280 ACCCCTCCGGCTGAGAAGGTGAAGAAGAAATGACAACTTGCAGCCAACGTGAAGAGAAAG Gene GeneID:518864|AFMID:XM_002696200:231_cdna Constitutive 0 NULL GeneID:518864 19 GENE AFMID NULL arylformamidase EMBV3_09789 GCAGGGGCTCATGTTGCTCTGTACCCATGAACTCCCAGCTTGCAAACTCATTATATTGAC Gene GeneID:618405|GADD45B:NM_001040604:69_cdna Constitutive 0 NULL GeneID:618405 7 GENE GADD45B NULL growth arrest and DNA-damage-inducible, beta EMBV3_16650 GAAGCAGCCCACCATAGAGCAAATGCTTCTTGGGAGGAAAAAGCCTGATCCATCACCCTT Gene GeneID:781227|PRPS1:NM_001046189:43_cdna Constitutive 0 NULL GeneID:781227 X GENE PRPS1 MGC159687 phosphoribosyl pyrophosphate synthetase 1 EMBV3_42574 TGCCTGTCTTGGTCATAAGTTGGCATTCTGCCACATTCCACATAATCTAGAGGGCTACAT Gene GeneID:541040|SEC63:XM_002690124:152_cdna UTR3_Alt 2 NULL GeneID:541040 9 GENE SEC63 NULL SEC63 homolog (S. cerevisiae) EMBV3_33843 TCTTGCCAGATTACTGTGCTGCTTGGACTCAAGGAATACAACCTGTACGCTTCGCTAGCC Gene GeneID:100296483|LOC100296483:XM_002694007:319_cdna Constitutive 0 NULL GeneID:100296483 16 GENE LOC100296483 NULL hypothetical protein LOC100296483 EMBV3_15167 CTCTGAAATTGGCAGACATATCCTCACAGCCTCCTCAAACTGACCAAGACTCCTCTGCCC Gene BVT0102_107941 + 1 EMBV3_35344 GK000030.2:96899283-96917373 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22333 CTGTCACATACAGTTTTTCTATCTTTTACACGGGGGCCAATGAGGAAGGGATTGAGGACC Gene GeneID:785334|TAAR9:XM_002690235:37_cdna Constitutive 0 NULL GeneID:785334 9 GENE TAAR9 NULL trace amine associated receptor 9 EMBV3_26396 CTCAGGAGGAAGAAGAGGAAGACCAAGGAAGAACGACTCAAACAGGAAATCGAGCGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26948 TCCAGGCTTCTACACTTGTCACTTATGTGAATCAGCTAATTGGACATGATGTGAAAGTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08857 CAGCGACAGAAGCAGCAGATTCAGGGGCCAGCAGGCTGCAGCAAAGTGTTACTCACCAAA Variant GeneID:538817|RNMTL1:XM_002695710:317_cdna 238^696 1 EMBV3_22325 GeneID:538817 19 GENE RNMTL1 NULL RNA methyltransferase like 1 EMBV3_27379 CCACACCTTCTGCGGCACCATCGAGTACATCCGCCCTTCACTGCAGAGAACCGGAAGAAA Variant GeneID:506083|RPS6KB2:XM_002699365:278_cdna 751^841 1 EMBV3_16312 GeneID:506083 29 GENE RPS6KB2 NULL ribosomal protein S6 kinase, 70kDa, polypeptide 2 EMBV3_04675 CAATGAATTTCACCTTTTTCTCAAGCGCACATGGAACCTTCTCCAGGATAGATCACATCC Gene BVT0102_063348 + 1 EMBV3_07525 GK000017.2:51874763-52565555 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00098838 TCONS_00010367 TCONS_00037938 TCONS_00019963 TCONS_00019989 TCONS_00022064 TCONS_00166080 TCONS_00244651 TCONS_00224115 TCONS_00250553 TCONS_00229820 TCONS_00135549 TCONS_00129726 TCONS_00136829 TCONS_00165811 TCONS_00231277 TCONS_00197449 TCONS_00249014 TCONS_00031938 TCONS_00064816 TCONS_00198626 TCONS_00020176 TCONS_00198800 TCONS_00221437 TCONS_00177994 TCONS_00251889 TCONS_00148277 TCONS_00210178 TCONS_00023334 TCONS_00017462 TCONS_00117178 TCONS_00244653 TCONS_00048822 TCONS_00152648 TCONS_00198662 TCONS_00055859 TCONS_00244654 TCONS_00250261 TCONS_00222772 TCONS_00141422 TCONS_00056147 TCONS_00207067 TCONS_00254568 TCONS_00249913 TCONS_00107792 TCONS_00197973 TCONS_00032586 47 XLOC_131641 XLOC_142855 XLOC_059082 XLOC_005918 XLOC_021767 XLOC_010641 XLOC_010667 XLOC_012735 XLOC_100918 XLOC_150512 XLOC_137411 XLOC_153496 XLOC_139314 XLOC_081772 XLOC_078439 XLOC_083040 XLOC_100651 XLOC_140766 XLOC_119110 XLOC_151957 XLOC_018183 XLOC_039540 XLOC_120280 XLOC_010854 XLOC_120453 XLOC_134752 XLOC_107767 XLOC_154830 XLOC_090159 XLOC_128688 XLOC_014001 XLOC_009039 XLOC_071344 XLOC_028953 XLOC_092413 XLOC_120316 XLOC_033667 XLOC_153204 XLOC_136079 XLOC_085850 XLOC_033950 XLOC_125586 XLOC_157500 XLOC_152856 XLOC_063702 XLOC_119632 XLOC_018826 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_05138 TCTGCCAAAGTGGACGCCGAAACTAAGCAGCGAATATGCCGGGAGTCAGGGGCTTGATCA Gene BVV0102_333118 + 0 NULL GK000021.2:70024641-70096496 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121967 1 XLOC_073541 NonCoding TCONS_00121967 XLOC_073541 NonCoding NonCoding MIR2284K 21:70095049-70096962 o TSS90739 1913 2 TCONS_00121967_4 132 0.322007318348144 1 0 0.00120907813603002 4.72743240609497e-05 0.000532117065717681 1.73635760571776e-05 2.06468110924545e-05 1.12192235695105e-05 0.000140228975041487 2.06123505364337e-05 0.000272216639071761 0 0 0 4.49965787563477e-05 0 0 0 0 0 9.74616151480902e-05 0.000449228834969656 1.58689309712458e-06 0 0 0 0.000530076704827537 0.000125220124692269 0 0 0 0 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 3e-61 241 88.08 0.0998431782540512 0 noncoding 0 0 0 0 -0.0130059054444178 0.92929858343109 0.0288207561286499 0.552326561511339 CCCTGGCCCCGGTGCTCCCCTCAGCTGCCGCCGCTTTCCTCGTGCTCCACACTCAGCAGTCCCGCCCGCCCCTCTCCCAGCCCCTGACCCTCACACGGCTGGACGTGACCCGGGGCAGGTCACACAGCCTCCACAGGAGGAAGCCTCAACTTCCTCCTCCATAGACGGGGCGCTAACTCCTGTGGTGGCCATCGCTGCAGCCCGGGGCCCTCTGCAGCAGATGCAGGTTGTAAAGAAGACCTCTGCACACGGACCGGCTCTTCAGGATTTAGTCTGCTCAAGGCAAACGCAGGCCACAGGATAGCACATACAGAGCGACTCCGTTTGAGTTTCAGCACGCCCACAGGCACAACACTCAGATTGTGCATTTATATAAGCACGAGCTTGTGTTAAGTTGACCAGAAAAGTTCGGTCGGGTTTTTCTGCAACATCTAATGAAAAAACCAAAAGAACTTTTTGGCCACCTCAACATACAAGTAAGGGATGAGATGCGTGTGGCTGCTCAGTCATGTCCAACTGTTTGCAACCCCATGGACTGTATCCCCCCAGGCTCCTCTGTCCGTGGTATGTTCCTGGCAAGAACACTGGAGTCGGTTGCCATTTCCTCCTCCAGGGGATCTTCCCGACCCAGTGATCGAACCCAAGTCTGCCGCGTTTCTTGCACTGGCAAGTGGATTCTTTGCCACCTGGGAAGCCACGTCTGCCAAAGTGGACGCCGAAACTAAGCAGCGAATATGCCGGGAGTCAGGGGCTTGATCAAGATGGACTTGGATTTTATTGGTAACACCTTGAATTTTATGACACTGCTCAAGAATTACTGTGTGATCTCAAATAAAAATGTAAATTGCACGCTTCTTGCAAAGGCGTGGGGAGAATTACACCCTAAGAGCCTAGCACAGCCCTGCCCTCCTAACCTGCTCCTCCTCAGCACCTGCGTTCCAACAACCGGCCCGGAGCCAGGCCATTTATTCACTCAACAAGCTGGTGCTGCTGCCTCCTCTGCTGCCTCGGCCTGGACTCTGGGTCAGAGGCGGTTCCAAAGTGGGCCTGGCGTGGCATGGAGAGTCTCCCAGCCCCAGGGGACATGGCAGGTGGACTTGATGCCCAGCCTCGCTTCCACATGTGTCTTCTAAATCTTTGGAGGTGCCAAAAAAAAAAAAAAACAGCAATAATATTTTTCATGCCAAACACCCATGAATAAACATTTTCTTCCAAAGAGACAATTTGTGGGACTTCCCTGGCAGTCCAGTGGTTAAGACACCGAGCTTCCACTGCAGGAGGAATGGGGTCAATCCCTGGTCAGGGAACTAAGACCCTGAGTGCCTCTCAGCATGACCAAAAAGTAGAGAAAAAGAAAATTTGTCAGACCAAGATTGATTAGCCAAACAGTTAAACACAACAAAACTAAAGTTTTTTTCTGGAAAAACCCAAAAGAAGTTTTTGGCCAACTCAATATATTAGTAAGGGATGGGATGTGTGTGTGCTCCGTCGTGTCCCAGCACCCAGAGCAGTGAAGTTACAGGACACAGGTGGCATGGAGAGCTCTGTCAAGTGCCTGTGACACCCCTGCAAGGTGTTCTGAACTTGAGACTCTTCTTGTTCTCTCCTGTTTAGTTGCTAAGTCGTGTCTGACTCTTGCAACCCCATGGTCTGTAGCCCACCAGGCTCCTCTGTCCATGGGAATTCCCAGGCAAGAATACTGGAGTGGGCTGCCGTTTCCTCCTCCAGGGAATCTTCCCCACCCAGGGATCGAACCTGTGTCTCCTGATGGGCTGGCAGATCCTTTACCACTGAGCCACCGAAGATTCGGTTCTAGCAGAGGGCACCAGCATTGACTGCAGCGCACACCAGCGTTCCGCACTTGGCCCTTCCCCACCCCACCACTGACCACCAGCCCCATCTTGGCACCCCAC TCONS_00121968 s 5' 0 TCONS_00121968 s 5' 0 EMBV3_37994 TGATCATTGGTAGAAGTTTGGCAGGAAAATTCTCTATAAGAGCCAAGAAAAGAAGAGTCC Gene GeneID:510253|PDIK1L:XM_002685768:570_cdna Constitutive 0 NULL GeneID:510253 2 GENE PDIK1L NULL PDLIM1 interacting kinase 1 like EMBV3_40969 TTCGACGACCGGGGCCGATCCAAGGCGAGTGTCTCATCATCTCGGTCTAAGTTCTACATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36930 CGGGCACTGTTCCTGCTCAGCAAAGGCATGGTAAAGAGCGTGAAGCCATGCCTGAAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33858 AACTCAAACCTCGTCCTGCATCAGCGCATCCACACAGGAGAGAAGCCTCATGAATGTAAC Gene GeneID:100140434|ZKSCAN1:XM_002698213:787_cdna Constitutive 0 NULL GeneID:100140434 25 GENE ZKSCAN1 NULL zinc finger with KRAB and SCAN domains 1 EMBV3_03624 CTGGACGCCGGCATGGATAGCAGCTACCAGGAATTGATGTCAACATAAAGGATAACCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12921 CAGTTTTCTGTAAATGTGCGAAGCCGCGGGGAAGGTGATCTGCTGCTAGGTGCAATACTA Gene BVV0102_016575 + 0 NULL GK000007.2:22881453-22886254 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216117 TCONS_00216115 TCONS_00216116 TCONS_00216118 TCONS_00216114 TCONS_00216113 1 XLOC_131174 Coding TCONS_00216118 XLOC_131174 Coding Coding CCNI2 7:22885404-22891914 = TSS161265 2414 1 TCONS_00216118_3 328 0.0231980115990058 6 0.630050699032109 0.0189847907761059 0.0147056465633133 0.0111182946112685 0.010527109755319 0.00666212185492722 0.00339351650297432 0.00435517332714161 0.00556704716676112 0.00636619017924732 0.000762551759586503 2.95892232054773e-05 5.64391323907857e-09 0.00121803649592521 0.000531866615792016 0.00191096217459883 3.40786060139104e-32 4.85109911937872e-35 8.08228189191786e-108 0.0129971430741222 0.0223938824850121 0.00583560234416297 8.12076782153444e-29 3.23578697627489e-11 1.07170465282129e-37 0.0175126917170509 0.00852520129482205 0.0128474802603731 2.12567332667823e-82 4.86799856912677e-09 1.75210483145325e-23 XM_002684208.3 CCNI2 PREDICTED: Bos taurus cyclin I family, member 2 (CCNI2), mRNA. 0.0 4354 100.00 0.999585749792875 NM_001039780.2 CCNI2 Homo sapiens cyclin I family, member 2 (CCNI2), mRNA. 0.0 1146 75.04 0.71996685998343 TCONS_00216118_3 sp|Q6ZMN8|CCNI2_HUMAN CCNI2_HUMAN Cyclin-I2; 7e-138 400 65.28 0.99390243902439 1 coding 1 1 1 0 -3.47718574966139 0.0398039726927718 -0.0631031707526891 0.204445985909242 AGGGCGGCATGCGCCGCAGAACTCGGCCTCGGAGGTGAGACCCTCCCGGTGTCCAGGTAAGAGTTCGGACGAAAGTCTAGGCGAAATGGCCCTTCGCTGTCCGCTCCCCCCGCGGCCGTGGAACGTCTCTCTCTCCGCGGCGATCCAGAGAAGTTTCTCGGAGGCGTGCCTGCGCGATGCGCTCCGGTTCCCCGCGCCTCCTTCGTGGACCAGATCCGTGCGGGGGGGAATGCGCGCTCGGCCACCTGCAGGCCCCGATCCCGCCGCAGCTCGGGGGCCGTCGCCCGCACCATCTACGCAGCCCCCTGTCCCCAGCGCCCCCAGGCTCATGCAGAAAACCTGGGGAGGCTTCCCGGACCAGCGCCGGCTGCTCGCCTACCTGACGCAGGCCCAGGGCCGCGAGGCGCGTCTGTGGCGGGGTGGCCAACTCCAGGCTGAGATTTGCGAAGCCTTCAGAGAAGTTGTGTTGTGGCTCCTGAGAGTTGAGAACATCTTTGACTTCTCTCAGACCACGTTTAACCTGGCTCTCTCCATCTTCAGCCGCCTCATAGTTTCAGTAAAGATAAAAAAGCATTTACTCCATTGTGTCACAATTACTTCCTTGAGACTTGCTACAAAAGTTAATGAAGAAGAGGAGTTAATTCCACGCATAAAAGACTTCATAAAGCATTATGGCTCTGGCTATTCCCCGAATGAGCTCCTCAGGATGGAGCTGGCTATTTTGGACAAACTGCACTGGGACCTCTACATCGGGACACCGCTGGACTTTCTGTCCATATTCCACGCCCTGGTGGTCCTGGGCTGGCCCCACGTGAAGGAGCTGATGCCTCAGAGGAATCCTTCCCTCCACGTCGCGTCCCTGACCAGGCAGCTGCAGCACTGTATGGCGGGCCACCAGCTGCTGCAGTTCAAGGGCTCCACACTGGCCTTGGTCATCATCACCTTAGAGCTGGAGAGGCTCATGCCCGACTGCTGTACTCCTATATCTGATCTGCTAAAGAAAGCACAGGTTGGTATTAGGCAGTGGAACCGCTGCAAAGAACTTGTAAAGGAGCAACTGGCAAGCCTTTAGTCATCCTCCTGAACAGCCACTTTCTGGCTCACCTGCCAGCGTCTGTGCCCTACCCCAGAACCCTTTACAGCATAATGCCAAATCTGGACTTGGACTCCTCTATATTCTAGGCTTTATGGGTCCTGTAACAAGAAAGCAAGAAGGCCTTGAAACAGCAACTGAGAAAACACTCCTGATTCTTCAGGAAAAAACAAGGGGGCAAAAAGACAGGTCAGGGTCCCTAAAGGGAAAGGTAGTCTGATAAATCAAACTCAGACTCCTGCCTCTCTCACAACCCTGGGCCCGAAACCAGGGGGAGGGAATAAATGCTCATAGTGCAGCTTGCTTTTTCTTCCTCATCAAGGGCTGTAGCAGCCTATAAGACAGCTGGACGATGAGGTCAGAGGCAGGCCTTGCTCAGGGCAGAAGGGCCAGGCTGGTGCTGACAGACAAGTTTCTGCTGCTCCACCTGCCAGAACTGGCCGCGTCTTTCCAGCTTCCCAGGCCTGTACCAAGAGCATGTGCAGGCTTCAAGTCCCAAGTACTCTGCCCGCCTTTGCAGAAACGGGATTTACCCTGACTCGCCCAGCATCTAAGTCTTTTCTTTGTAAGAACTCGATTCATAAAGTGCTTTATTTCATATACAGTAACCAAATCAAGCTTTAGGCATATTTCTGCTTGGTTACTCTTAGTTTACAGGCTTAACTAGAGGAATTTTTGTGTTTAGAAAATGACACTTGGAGGTGATCCTTGTGTTGGGAAGCCGCACTCCCCAAGTTTTGGTTGAGATGAGCGGGTCCTGAGGCTGAGCTCCCACTACTGCAGGGAGGAGGGAGGGACCACTAGCATGGCCGTGAGGGAGAAGCCAGCTGCCCCTGGGAAGCAGTGACACTATGGAGCCATTCTCTAGGCAGTGGAGTCCAGCTGACAGTGATGCCAGCTGGGACTGTGGAGGTAGTGCTGGGGATGCAAATGACTGAGCCACACATTTAGAGGTCATCTGTGAAGTCCTTCCGCGGTGAACAGTTTTCTGTAAATGTGCGAAGCCGCGGGGAAGGTGATCTGCTGCTAGGTGCAATACTAGCTATACCGTATTAGTGTCTGTCCTGTAGTCAGCACAAATCTCTGCCTTTTGTTAAGACAAATTTGCTTGTTGGAGCTTTTGTTGAAATACACTTCCTTTCAATCCTTTCTGTGTCTTATTTTACATGTATTAGATACCGTGCATTGAGATTTGATAGAGTCAAACACATGTGAAATGCAGTCTCTCAAACCCTATCAGTAACTGTCCCCTAGCCCAGCACATGGAGAAGGCAATGGCACCCCACTCCAGCACTCTTGCCTGGAAAATCCCATGGATGGA EMBV3_34781 AGGTACTATTCGTCCCTCACATAGAGGGGATATCACTCACCTTTGGGCTTGCTGTGTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20724 TTCTCAAGAAATCTGAAGGGAACGCTGACAGAAGACCCACTTATTCCTGGGACCCGTTGC Gene GeneID:538771|KIF5C:XM_002685363:256_cdna Constitutive 0 NULL GeneID:538771 2 GENE KIF5C MGC152055 kinesin family member 5C EMBV3_29287 GTGGAAAGAGATTCCTCCGTAGTTCAGACCTTTACAGACACCAACGACTTCACACAGGGG Gene GeneID:512036|ZNF449:XM_002699564:69_cdna Constitutive 0 NULL GeneID:512036 X GENE ZNF449 NULL zinc finger protein 449 EMBV3_38700 CCACCAACATGGTTTCATCACAGAACACAGCCAATGAATCAAACCCATTGAAGAGAAAAC Gene GeneID:538983|TAF9B:XM_002699977:51_cdna Constitutive 0 NULL GeneID:538983 X GENE TAF9B NULL TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa EMBV3_19658 CACAGCTTCATTGCAGGACTTTGTGGCTGTTTCTCTGATTTGAACCTTCGATTGGTACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03379 AGCTTGTGGAGCTCAGGCAGCACCTGGAGCACTACGACAAGATCCAGGAGCTCACGCAGA Gene GeneID:617312|CEP72:XM_002696469:102_cdna Constitutive 0 NULL GeneID:617312 20 GENE CEP72 NULL centrosomal protein 72kDa EMBV3_12745 GCAGCCACTTTCTCCTTTACCCCCACGTAACCCTGTCCTCAATGTGGGTTCCATCTCTCA Gene GeneID:511941|CEACAM19:NM_001080261:190_cdna Constitutive 0 NULL GeneID:511941 18 GENE CEACAM19 MGC143231 carcinoembryonic antigen-related cell adhesion molecule 19 EMBV3_09199 GAGAAGATTCTACCTGAGACTTGTGATGGCTGAGAAATGCCACTCACTTCTGCGTAGCCC Gene GeneID:511198|FAM114A1:NM_001038077:20_cdna Constitutive 0 NULL GeneID:511198 7 GENE FAM114A1 MGC133812 family with sequence similarity 114, member A1 EMBV3_22897 AGACACCTTCCTGTTGGCGTTGGGGTTTTCACGTTAACTCATAGCTGTGTCGGCCGTTGT Gene GeneID:511619|AXIN2:XM_002696233:66_cdna Constitutive 0 NULL GeneID:511619 19 GENE AXIN2 NULL axin 2 EMBV3_07813 TTCAAGACTTTCGGCATCTCCAGGAATCGCAACAGCCGCATGAACAAGGAGCCCTGCTTC Gene GeneID:538799|B3GNT7:XM_002685679:472_cdna Constitutive 0 NULL GeneID:538799 2 GENE B3GNT7 NULL UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 EMBV3_31302 TCTTCCTCTTTCCCTCCGAGAAGGCAGCGGAGGCAGACTGTACAGCCATGGCCAAGATTA Gene GeneID:100337442|LOC100337442:XM_002696526:153_cdna Constitutive 0 NULL GeneID:100337442 21 GENE LOC100337442 NULL ribosomal protein L35-like EMBV3_25066 TAGCTCTTCAGAGGTTCATGCTTCTGTCTTAAAGAGCATAGGAAAATACTGCCTAGCAAG Gene GeneID:282259|IGFBP1:NM_174554:13_cdna Constitutive 0 NULL GeneID:282259 4 GENE IGFBP1 MGC134090 insulin-like growth factor binding protein 1 EMBV3_25123 AAACGGCGAGTGCCTGCGTCCTGGGCACAACGTCTCTTTGGGATGATGAAAATGCTCTAA Gene BVV0102_049529 + 0 NULL GK000025.2:511948-517558 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147562 1 XLOC_089449 NonCoding TCONS_00147562 XLOC_089449 NonCoding NonCoding - 25:515191-515649 - TSS110097 458 2 TCONS_00147562_2 34 0.74235807860262 1 0 0 0 0 0 0 0 0 0 0 0 9.99643243880036e-06 0 0 0 0 0 1.81247532280594e-05 0 0 0 0 0 0.000340521489564712 0 0 0 0 0 1.05995676752246e-05 2.62544083286903e-05 NM_001083484.1 SMYD1 Bos taurus SET and MYND domain containing 1 (SMYD1), mRNA. 6e-19 98.7 82.08 0.207423580786026 NM_020459.1 PAIP2B Homo sapiens poly(A) binding protein interacting protein 2B (PAIP2B), mRNA. 5e-07 59.0 83.93 0.120087336244541 0 noncoding 0 0 0 0 0.0923784103985006 0.54286118449658 0.0818094109664661 0.194589784388829 TGTGCTTGTCCCCTCTGCATGCAGTCTTTCTAGGGAGCCCCAACACACATGGCCTCTGCCAGTTCGGGTCCTTTTCACTGACTTACTGTTTTCAATGTTTTTATTAAGGCATACTTTACATATTACAAAATTCACCCATTTCAAGTGTACAATTCTTGAGTTTTACAAAATATTTGTATTTGGCCACACTGGATCTTAGTTGTAGCATGTGGGACCTGACCAGGGATCGAACCCGGCCCTCTGCGTTGGAGCACAGAGTCCTTGTCACTGGACCACCAGGGAAGTCCCTACAGTCACTGGGTTTTCAATAGCTTTACCAAGTAGTGTAACCGTCACCAGTTAGAGCATTTTCATCATCCCAAAGAGACGTTGTGCCCAGGACGCAGGCACTCGCCGTTTCCCCTCCCCCAGGTCCTGGCAACCACTGATTACTTTCTGTGGACTTGCCTAGTCTGGAT TCONS_00144055 . 5' 1666 TCONS_00144055 . 5' 1666 EMBV3_00415 TGCGCTAAGGCGTACTACAAGTCCTCCCACCTCAAGTCGCACCTGCGGACGCACACAGGT Gene GeneID:519163|KLF16:XM_002689183:249_cdna Constitutive 0 NULL GeneID:519163 7 GENE KLF16 NULL Kruppel-like factor 16 EMBV3_00439 ACCTAGGGGTCAGGCTCCATTAGGTTTTGCCTATTCCCGTCTCTTCCTATCCAACCACTC Gene GeneID:282356|SLC2A1:NM_174602:23_cdna Constitutive 1 NULL GeneID:282356 3 GENE SLC2A1 MGC139716 solute carrier family 2 (facilitated glucose transporter), member 1 EMBV3_11475 AGAGAGTTCTGCTGTACGTGCGGAGAGAGACTGAGGAGGTATTTGACGCCCTCATGTTGA Gene GeneID:531906|GRHL3:XM_002685773:588_cdna Constitutive 0 NULL GeneID:531906 2 GENE GRHL3 NULL grainyhead-like 3 (Drosophila) EMBV3_43359 CCTGGCTTGTCGACCGAAGCTATCACTTGGGAAGTTTTGCAACTAAAGTGGGCTACAGTC Gene BVT0102_220685 + 0 NULL GK000011.2:99506215-99506997 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34593 TCCCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGC Gene BVT0102_058239 + 0 NULL GK000013.2:8047000-10208466 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206254 TCONS_00173460 TCONS_00129429 TCONS_00173459 TCONS_00241066 TCONS_00011558 TCONS_00156834 TCONS_00057018 TCONS_00173458 TCONS_00034471 TCONS_00173130 TCONS_00138406 TCONS_00122162 TCONS_00206255 TCONS_00202228 12 XLOC_124865 XLOC_104361 XLOC_078142 XLOC_147730 XLOC_007109 XLOC_095294 XLOC_034820 XLOC_020687 XLOC_104301 XLOC_084614 XLOC_073717 XLOC_123873 Coding TCONS_00241066 XLOC_147730 NonCoding NonCoding - 9:59411083-59412679 - TSS180744 1596 2 TCONS_00241066_3 52 1 0 3.83618306476266e-06 0 0 5.20310846526627e-07 0 0 0 0 0 0.000371602900397673 0.000357601974581728 0.000119595869008014 5.78238343294847e-05 6.3436643798457e-05 0.000423366625732826 0.0434995119042029 0.00915912048134125 0.0335503791342459 0 0 0 0.0119063293741613 0.0103354717804554 0.0203104914748732 0 0 2.62224429621199e-07 0.0015197245229825 0.0010367077463294 0.00443118164624402 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 2e-70 271 86.70 0.143483709273183 0 noncoding ACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGGGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAAAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACATCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGCAGAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAGAAAAATAAAAAGAAAAAAGGAAAAAGTGAAAAAGAAAAAAGGAAAGAAAATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGATCGGAGGAGGAAGGAATCAGGGAATGCAGCAAGATAGAAAAAGAAAAAAAAAAGGAAGTTAGAAAAAGAGACACAGAGAGAAAGAGAAGGAGGAGGAAAGAAAAAGTTAGAGAGAAAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAGAAGAGAAGAGGAAGGAAAAAAGATAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGGAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTTACAAGACACTGTGGCCAGACGCCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCACCTTCCAGGGCCCAAGAGTTCCCCACTTGGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAACAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCCTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAGCCCAATGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTCGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAATAAATAAATAAATAAATGAAAGAGAAAGAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACA TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 EMBV3_23821 TAGGTCCCTATGTTTGTGGATGGCTGTAGGTTCTTGGCTGTCTGGTGTTCCCGTGTCTAT Gene GeneID:505491|LOC505491:XM_002687499:387_cdna Constitutive 0 NULL GeneID:505491 5 GENE LOC505491 NULL similar to Olfactory receptor 10A7 (Olfactory receptor OR12-6) EMBV3_23816 AAGGCCAATGTCTTCGTCAAGCTGCCCAAGCTCCAGAAACTCTACCTGGACCACAACCTC Gene GeneID:532494|IGFALS:NM_001075963:228_cdna Constitutive 0 NULL GeneID:532494 25 GENE IGFALS NULL insulin-like growth factor binding protein, acid labile subunit EMBV3_41221 TGGAGTGACCAGAAGAGAATTACTGTGTGTTAAGTGAGCTGAAAGGGGAGAGATCAGTGC Gene GeneID:507285|CHN2:NM_001045963:16_cdna UTR3_Alt 2 NULL GeneID:507285 4 GENE CHN2 MGC137510 chimerin (chimaerin) 2 EMBV3_14540 TGGACAGTTTTGTGAGCCTGTACCTGCATCCTTCCATTTCTGGCCTGGATGCAGCTGCTT Variant GeneID:613730|POLE4:NM_001101225:57_cdna 426^566 2 EMBV3_22387 GeneID:613730 11 GENE POLE4 NULL polymerase (DNA-directed), epsilon 4 (p12 subunit) EMBV3_03429 GAGAAAAAGGAGGGGAAAGGTATGAGTTCTAACCGGACATGGATTTAGGTCTCTTAAATG Gene GeneID:280939|TEK:NM_173964:2_cdna Constitutive 0 NULL GeneID:280939 8 GENE TEK MGC139569 TEK tyrosine kinase, endothelial EMBV3_16499 ATGCAAGTCTCAAACAGCTTAGATGGGAGGCTGAACGTGATGACTGGTTACACAACAGAG Gene GeneID:507575|CEBPZ:NM_001083386:68_cdna Constitutive 0 NULL GeneID:507575 11 GENE CEBPZ MGC140326 CCAAT/enhancer binding protein (C/EBP), zeta EMBV3_22033 ATGCCCACCGAGACCCTAATGGAGAAACGGGACTTTGGAGGGATGTCTCTTCTATCAGGA Gene GeneID:100295636|LOC100295636:XM_002697565:378_cdna Constitutive 0 NULL GeneID:100295636 23 GENE LOC100295636 NULL similar to ribosomal protein 10 EMBV3_04341 ACATTAGCTGCACGGAGCCACTGAAGTGATGGTGGTAAATACTAAAGCCCGCAAGGCTTC Gene BVV0102_395407 + 1 EMBV3_33792 GK000003.2:59280290-59303475 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06384 CTAGCTGCCAGGCGGGTTTTGGTGTTTGAAATGCGGGGCAAAGCACTACATCACTGCAAA Gene GeneID:540563|ASH1L:XM_002685976:295_cdna UTR3_Alt 2 NULL GeneID:540563 3 GENE ASH1L NULL ash1 (absent, small, or homeotic)-like (Drosophila) EMBV3_07755 TGTGAATCTCAGGAGAGAGCAGCCAGAGTGGTTGGGCTCATGTGGTTTGTGCCCTGTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23440 GTGTCACAGCCCTGATTGGGTGCTTATTCCTTATCGTCCTCTCCTATGTCTTCATCGTGG Gene GeneID:540354|LOC540354:XM_002688594:328_cdna Constitutive 0 NULL GeneID:540354 7 GENE LOC540354 NULL similar to Olfactory receptor 10H4 EMBV3_05393 ATACCGTGTACTCCACGTTCATGTTCGCGGCCACTTTCGCTCCGCTAGGTGGGCTTGCGA Gene GeneID:100299277|LOC100299277:XM_002683631:2_cdna Constitutive 0 NULL GeneID:100299277 6 GENE LOC100299277 NULL hypothetical protein LOC100299277 EMBV3_18096 TCCCATGAAGAATTCGGTTGTGTCTGCCTGCTTCTCATCATTGCTGCCCGAAACCACGAA Gene GeneID:524155|PARN:NM_001101118:344_cdna Constitutive 0 NULL GeneID:524155 25 GENE PARN NULL poly(A)-specific ribonuclease (deadenylation nuclease) EMBV3_29978 GTCGGCTGTGTGTGTCTCCAGCCTCCTCCCCTCTGTAGTCAGATAATCGTAATCACATGA Gene BVT0102_088878 + 0 NULL GK000013.2:16002941-16171104 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044522 TCONS_00044523 TCONS_00044524 TCONS_00044525 TCONS_00044527 TCONS_00044526 1 XLOC_026224 Coding TCONS_00044524 XLOC_026224 Coding Coding TAF3 13:16041686-16098650 j TSS32722 4303 1 TCONS_00044524_2 779 6 0.924565068553271 0.000434368553594131 0.000788588594856876 0.000510798949179535 0.000445915592905376 3.41358164543055e-05 0.000134797870642599 2.69368280852545e-05 0.000295665886761893 0.000132180987477668 1.85125883309297e-05 1.00581555413062e-10 1.09057259292433e-10 7.97871287203623e-05 8.52859658411656e-05 4.03948294721426e-05 6.67050908569667e-13 1.50601197077831e-09 2.4197039564753e-30 0.000649201188790188 5.64721619579034e-09 6.7324312642236e-19 1.56587525019567e-10 3.73507014727695e-05 5.95774336415625e-24 7.87476303465893e-05 8.29717587869803e-07 0.000357392365830677 1.10333418544263e-08 3.01372183100963e-05 7.66079291734727e-07 XM_003586754.2 LOC506674 PREDICTED: Bos taurus transcription initiation factor TFIID subunit 3-like (LOC506674), mRNA. 0.0 4745 100.00 0.611201487334418 NM_031923.3 TAF3 Homo sapiens TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa (TAF3), mRNA. 0.0 2320 81.57 0.555658842667906 TCONS_00044524_2 sp|Q5VWG9|TAF3_HUMAN TAF3_HUMAN Transcription initiation factor TFIID subunit 3; 0.0 939 86.52 0.998716302952503 1 coding 1 1 1 1 0.046851575027513 0.772280307322224 -0.140809207033004 0.0665356139747461 GTTGGCGGGGGTTACTAGTGAATCACTAGCGGGTCAGACTCCGCCATCGTCCTCGGGTTACAGTCGGGGTACAGACGAGGCTCCACGCAGTCAGAAGAAGAAGAAGAGCAGGTACCCACAGATGGAGGCACGTCAGCAGAAGCCATGCAGGTTCCCCTGGAGGAAGATGACGAGCTGGAGGAAGAGGAGATTATTAATGATGAGAATTTCTTGGGTAAGAGGCCTCTGGACAGTCCGGAAGCTGAAGAAATGCCCGCGATGAAGCGGCCACGCCTGCTAAGCACCAAGGGGGACGCCCTGGATGTGGTGTTACTGGAGGCTCGAGAGCCGCTCAGCTCGCTAAACCCCCAGAAGATCCCTCCCATGCTGTCCCCCGTCCACACCCAGGACAGCACGGACCCAGCTCCTCCATCACCAGAACCACCAATGTTAGCTCCGGTGGCAAAATCACAGATGCCAACCACAAAGCCATTGGAAGCAAAGTCGTTTACACCCAAAACAAAGACTAAAACCAGTTCTCCAGGACAGAAGACGAAATCACCCAAAATGATTCCGTCACCAGCCATGGTCGGAAGTCCTATTCGGTCTCCAAAAACCATATCCAAAGAAAAGAAATCTCCTGGACGTTCCAAGAGCCCGAAGAGCCCCAAGAGCCCCAAGGTCATGACTCACATTCCCCAAGTACCTGTCAGACCTGACACACCCAACAGGACTCCTTCAGCCACAATAAGTGAGAAAATCAGTAAAGAGACTGTTCAGGTGAAACAGATACAGACACTGCCTGATGCTGGGAGACTGAACAGTGAGAGTCAGCTCAGAAAGGCTGTCGTCACCGACAAGACCATCGATGACTCCATTGATGCTGTGATCGCACGGGCTTGTGCGGAACGCGAGCCCGATCCTTTCGAGTTCTCTTCTGGGTCTGAATCAGAAGGAGACATTTTTACCAGCCCTAAGAGAATTTCAGGTTCAGACTCTGCTACCCCCAAAGCCTCCACCTCCTCCAATAATTTCCCCAAGTCCGGGTCCACCCCTCTGCCTCTTTCAGGCGGAACTTCAAGTTCGGACAATTCGTGGACAATGGACGCATCCATCGACGAGGTGGTTCGGAAGGCCAAGATGGGGACCCCTCCCAGCATGCCCCCCAGCTTCCCTTACATTTCCTCCCCTTCGGTCTCTCCTCCCACCCCTGAGCCCGCGCACAAGGTGTATGAGGAGAAACCCAAACCGCCGGCCTCCTTGGACGTCAAAAAGAAGTTGAAAAAGGAACTGAAGACGAAGATGAAGAAGAAAGAGAAGCAGCGAGATAAGGAGAGGGACCGGGACAAAAGCAAGGAGAAAAGCAAAGAGAAGGAGAAAGGGAAGGAGAAGGAGAAAGACAGGGAGGCCACCAAGGAAGCCAAGTATCCCTGGAAGGACTTTCTCAAAGACGAAGAGGCCGATCCCTACAAGTTTAAGATAAAAGAGTTCGAAGATGTGGATCCAAAAGCCAGGTTGAAAGACGGGATTGTGAGGAAGGAAAAGGAGAAGCACAAAGACAAGAAAAAAGACCGAGAAAAGGGCAAAAAGGACAAAGAAAAGCGGGACAAAGAGAAAGTGAAAGAGAAAGGCCGCGAGGAGAAGCTGAAGGCCCCCCCGGCCCCGCTGGTCCTGCCCCCCAAGGACGTGGCGCTGCCCCTGTTCAGCCCCGCGGCCGCCATGCGCATCACGGCCGTGCTGCCCTCCCTGACGCCCGTGCTCCCCGAGAAGCTCTTTGAGGAGAAGGAGAAGCCCAAGGAGAAGGAGAGGAAGAAGGACAAAAAGGAGAAGAAGAAAAAGAAAGAGAAAGAAAAGGAGAAAGAGAAGAAGGAAAAGGAGAGGGAGAAAGAGAAGCGCGAGAGAGAGAAGAGGGAGAAGGAGAAGGAGAGACACAAGCATGAGAAAATCAAAGTGGAGCCCGTGGTCCCAGCCCCAAGCCCCGTCATCCCCAGACTGACTCTCAAAGTTGGAGCCGGCCAGGACAAGATTGTCATCAGCAAAGTGGTCCCAGCCCCCGAGGCTAAGCCGGCACCTTCTCTGAACAGACCCAAGACGCCGCCCCCCGCCCCAGCCCCCGCCCCGGCCGCCATGCACGTCACCCCTGCCCCGGTGCCTTTGCCCCTCCTGGCCCCGGCCAGCGCACCCCTCGCCGGGATGCCCGCCCCAGCCCCTGCTGCTTCGGGAGCCGCCAGCTCCAAAGCCCCTGTCCGCAGTGTGGTCACGGAGACGGTCAGCACTTATGTGATCCGAGACGAGTGGGGAAACCAGATCTGGATCTGTCCCGGCTGCAACAAGCCCGATGATGGGAGCCCCATGATCGGCTGTGACGACTGTGACGACTGGTACCACTGGCCCTGCGTGGGGATCATGGCCGCGCCCCCAGAAGAGATGCAGTGGTTCTGCCCCAAGTGCTGCAACAGGAAGAAGGATAAAAAGCACAAGAAGCGGAAGCACCGGGCACACTGATGCCTGGAGCGGGGGTGCCCCCGCCCACCCCCCACCGCATCGCCCCGGACGCTGAGCCCGGCCAGACTGAGGACAGAACACGCGCCCCCCCCCACCCCCGGGGGCTCTGCGAGGGCCCCCGGCCGAGGGCCACGTGGTCGCCCCCGGAGAAAGACTCTCATGCACGGGGCGGGGGGGGCCTCGCCTCCGTTTCCTATTACCAGTGACAAGTATTATTAATAAAAAGACTATAATCTTTCCTTTCGATTTTCCTCAATTCTCTCCAGGGCCTTTTCCTTAAGGTGTTAGCTGAGAAGATGGCGTGTGGCCCGCCCTGACCGTGCCCGAGGGTGACGTGGGTCGGCTGTGTGTGTCTCCAGCCTCCTCCCCTCTGTAGTCAGATAATCGTAATCACATGAAAGAAAACTCCAGGGGGAGTGTCAGTAAATATTTTTGTGATGAAAAATATATGAAGCTTCCCCACCCTGCACCCCCTGTTTTTAGTACTAACATGTAAAATGTTCAGGCTTTTTGTGAAATACCTTATATTTTTTAAGAAAAAGGTTTCTATCATGTCCTGTTGGCTCTTCTGTGGTTTGTTTTTGTTGACTCTCCCACCTGTCCTCTCTCTCTGTCATCCCCCAACTCTGCCCTTTCCTCCAAACTGCTTGTGGTCTTCTCATGGATTACCCATCTCATCAGCTTGTAGGAAAACTCTGCACACCAGGAGATCTCCCCTAATGTAAATAATAAATATTTATGAAGTAGTTATTTTTAAAAATTTTTTATCGTGTTTAATTCTGGCTTTCTGTGAAACGCGCTGCGGTTTCAGCCCCATCTGTAATTACTGCTGTACATAAGCAAAGAAGGCTGGAAAAAAAAGAGCCGTACGTAAGTTCAAAGTTACCTACCTTGAGCTGAACCCTCGCAGAACACTGGGGGGAGGACCTGAGCAGTTGGAAGGAAAACAAGGCAATTTAAATCTATGGCTTATGATTTGAAATTGTTTTGTTATTTCTTCTATTTCTGTAAATTTCTTTGACTTCCTTTTGTTTCAAAGGACATGTAGATTCCCCGAAAGTAAAAAAAAAAAAAAAAAAAAAATACTGTAGCATTTTGTGTTTATATTGTTTTATTTCTGCAAATCTGTTCATTGATATTGTGGTTTAAGGCTGAAATGAAGTATATTATGCAATTTTTTTTTAAAAGAAAACTCATCAAATTTCAGGGTATCACAAAACTTTATTATATTACTATACTGCCCACTATTTATTATATGTTAATAGATGTCTGAGAGATAAACCAAATATTTTATTTTTAATGTAAAACATCAAATTTAATTTTATTAGCATATTTTAGCAACTTTGGAATAAATATGGACTTTTACTTGATTTTGAAATAATCCCAACTTGGGCCAGTGTTAATGGATATCTTGAATGCTAGAATATGGGCTTTGAACCTAATACAAATATATTAATAGAAATTGTGATTTTTTTTCAAATGCCAAGTAAATTGATATTAGTGTATGAATTAATCATATTTTAAAACATATTATGTGGTTAGAGAAATGAGGTTTTCTGCTGTGAATGTTAAATTGCAGATCAGTGTCACCCTCTTGAGTGCAGTATCTCATTGCCCTCCTTGTTCTAGAAGCCAACATTTTTCTATGCCTACAAAGAAAGCATCTATGTTGAGATACATGGTTTTGTTCTATTGATTTGAGATCATCCTAAATACTTTATACAATATTTTCACATGCACAGAATCTACCCCATTAGTGCTTTTTGGAGAGGGATGAAGGTGGGGAAGTGCAAAATAAAGGATTATTGGCTATTTCATA EMBV3_10378 GAGGACGCCTGGATGGGCACGCACCCTAAGGTAAAAGCTGGCATGAAGTAAACTGTGTGG Variant GeneID:614118|TSEN15:NM_001076312:29_cdna 186^267 4 EMBV3_40358 GeneID:614118 16 GENE TSEN15 C16H1ORF19 tRNA splicing endonuclease 15 homolog (S. cerevisiae) EMBV3_10946 CTGAAGTTTAAGACCAATTCTTGTTCTGATCTCAGGTGGTAAGATGGCTACCCACAAGAA Gene GeneID:506921|SLC15A2:NM_001079582:35_cdna Constitutive 1 NULL GeneID:506921 1 GENE SLC15A2 NULL solute carrier family 15 (H+/peptide transporter), member 2 EMBV3_06208 TCCATTGCTGCGACCAACAAGCTGTGCCAGAGTTTCCAGACCTTCAACATCTGCTACGCA Gene GeneID:282393|UQCRC1:NM_174629:58_cdna Constitutive 1 NULL GeneID:282393 22 GENE UQCRC1 NULL UQCRC1 protein EMBV3_11219 CTCTCAGCAGCCATCAAACAACCGAATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTG Gene GeneID:530341|LOC530341:XR_083652:116_cdna Constitutive 0 NULL GeneID:530341 4 PSEUDO LOC530341 NULL similar to Cortactin-binding protein 2 (CortBP2) EMBV3_03003 AGATGAGGACCCAGAGCAGCAAGAGGACGAGCAGGACGTGGAAGACGACTATGATCTGCT Gene GeneID:618341|PTPRCAP:NM_001046618:137_cdna Constitutive 0 NULL GeneID:618341 29 GENE PTPRCAP MGC140438 protein tyrosine phosphatase, receptor type, C-associated protein EMBV3_11762 TGTGTGAGACATCAGGGAGTGTCAGCAACTGTGCCAGATTGGAAAGTGCATACTTTGTCT Gene BVV0102_377293 + 0 NULL GK000008.2:78601083-78871654 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30517 AATGTACAAAAGTCTGGCGAGTCACAGCTTACTCTGCCGTTCGTAGCAAGGTTGAACTCC Variant GeneID:506977|LGALS8:NM_001045954:78_cdna 698^820 1 EMBV3_04145 GeneID:506977 28 GENE LGALS8 MGC133892 lectin, galactoside-binding, soluble, 8 EMBV3_28641 CTCGACCTCCAGAGCACACCCTGAACTCCAGCAACATCTGAGTGTGCCTTTGCCCCGTTT Gene BVV0102_248168 + 0 NULL GK000003.2:20726742-20727477 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169011 TCONS_00169005 TCONS_00169008 TCONS_00169010 TCONS_00169006 TCONS_00169007 TCONS_00169009 1 XLOC_103250 Coding TCONS_00169006 XLOC_103250 Coding Coding MTMR11 3:20718767-20731286 j TSS126635 4376 2 TCONS_00169006_2 445 15 0.651621664802684 2.84154064282313e-05 1.74195870264323e-05 1.74839949893782e-18 2.01953528389104e-05 1.55155892249602e-15 1.42272360908554e-11 0.000103084304115523 2.21178688143356e-46 2.91483058097123e-32 9.92312493548531e-56 2.14272303833907e-08 2.54541735777048e-09 5.38353768839708e-12 6.17163210199282e-46 1.74768063727556e-05 0.0015163322323065 1.66324115863578e-07 0.000788200789385233 3.86335153282414e-15 1.84910375237891e-51 9.91078605007132e-32 0.000144316467001389 0.00160745714471682 6.7657839566967e-05 2.80518173209879e-05 2.51248435735168e-05 5.41434778545608e-07 3.20928158083267e-14 5.0368885687175e-10 0.00027968741507156 XM_005203860.1 MTMR11 PREDICTED: Bos taurus myotubularin related protein 11 (MTMR11), 0.0 2924 100.00 0.370201096892139 NM_005850.4 SF3B4 Homo sapiens splicing factor 3b, subunit 4, 49kDa (SF3B4), mRNA. 0.0 2296 87.55 0.423446069469835 TCONS_00169006_8 sp|Q15427|SF3B4_HUMAN SF3B4_HUMAN Splicing factor 3B subunit 4; 0.0 812 99.76 0.997641509433962 3 coding 0 0 0 0 -0.0288817804421316 0.845388296037861 0.0495331368816888 0.786457429881662 ACTGATCTCAGTTTCTCCTGAGAGTCTGAGTGTAGGCCTCCAAAGGTGGCTGCTGAAGTAACCCCAGACTCCAGGACCAGAGAAGCTTGGGGATTAACCCTACACCCTTCACAGCTCTCTGGACCGAAGTCTGTCCAGGGGACTGGGATGCCAGAGCCCAGGAGTCGTCAGCTGGGCAGCTGCCTGGCCTCTGGAGGCCTCCCAGGGGAGCAGATTCTAGCATGGGCCCCAGGGGTGAGGAAGGGGCTGGAACCTGAAATGCCTGGAACCCTGATCTGCAGCAACTTGAGGGTCACCTTCCAGCCCCATGGATGGCAGCGGAGTCAGGAGACTCCCCTGAGCAGTGAGTATGATTTTTCCCTGGCCAACATTGGGCGATTAGAGGCTGATTCATCTGTAGCTGAGGATAAATGGTTCTCAGCTTTGGAAGGAACACGATGGTTGGACTACACCAGGTCTTGTCTTCGAAAGGCCAGTGACATCTCAGTCTTAGTGACATCCAGGGTTCGTTCTGTAGTACTTCAAGAGCGCGGTGATCGTGATTTCAATGGCCTCCTCTCTTCACTCGTCCAGCTGCTTTCAGCCCCTGAAGCCCGAACACTGCTCGGCTTCCAATCACTAGTGCAACGAGAGTGGGTGGCAGCTGGACATCCTTTCCTGACCCGACTTGGGGGATCTGGGGCCAGTGAAGAGGCCCCAGTGTTTCTCCTCTTCCTTGATTGCGTCTGGCAGCTCCTCCAGCAGTTTCCAGCTGAGTTTGAATTTTCTGAGTTCTTCCTTCTTGCTCTTCATGACAGTGTCAGAGTTCCTGACACCCTTACATTCTTAAGAGACACTCCCTGGGAGCGTGGAAAGCAGAGTGGACAGTTCAACAACTATACACAAGTCTATACCCCTGGGTTCCCAGGGGCTGGGAACTCTATTAACCCACAGCTATCTGTCTGGGACTGGAATTTACGCTACAGCAATAAACAAATACTACAATTCCGTAATCCTGGCTATGACCCAGAACACTGCCCAGATTCCTGGCTCCCTAGACAGCAGCCAAGCTTCATGGTTCCTGGGCCCCCCAGTTCCGTGTGGCTCTTCTCTAGAGGGTCCCTGACACCCCTGAATCAACTCTGTCCTTGGCGGGACAGTCCCTCCCTGCTGGCAGTCTCTTCTCGTTGGCTCCCTCGACCTGCTATCTCTTCTGAAAGCCTGGCTGATCAGGAGTGGGGGCTCCCCTCACACTGGGGAGCTTGCCCTTTACCCCCGGGACTGCTGCTGCCTGGATGTCTGGGACCCCAGATCAGGCTCTGGAGACGCTGCTACCTGAGGGGAAGGCCTGAGGTCCAGATGGGCCTCTCAGCTCCCACAATCTCTGGTCTCCAGGAGGAGCTATCCCATCTTCAGGAGTTATTAAGGAAATGGACACCACGAATATCTCCCGAGGATCACTCCAAGAGAAGAAACCCAAACACCATTCTCTCCCAATCCCGTTGAAATTGCTTTCTCACGGGCAGGGCAGAAGGTGGTCTGGGGGGAGGGAGAGTTTTGTCTAATCCTTCGTTTTTTCTTATCTGGTCTTGCTGCCTCCGCTTTCATAAACAAGATCACTGACCTGAGTTTCTATTTAAGATGAGTGGTGCTAACCGTATCCAACTCTTACCCTGCCTTGTTTGGTTTAAATAGTTCTTGTCATTTGAAGAATTAAGAAACAAAAACAATCCAGAACGACTGCCTCTTTTTTTCAGGGCAATTCCATGTCTTTGGGATGGAAATTTTGTATATCGCGCTGGTAAATTGTGATAATCAGATATACTGTTTATCAGTGCCAACTAGATGGCCTACAGACCTCCTTCTCACCTCCTCTTGCTGCTTCTTTAATTCCAATTTCTATTTCTTCCCTTATAGTTTTCTATGGGTATGAAATATACACGGGACACCCTATCTCTTCCAATTATCTATTTTCGTCGTGACATTTCTATTTAAGGAGTTCATTAAAGCACAATATTTATACACGCCGCTGGCACTGTTTGTGTCTGATTAAAGGAACCTTAGGCAAGGGAGTGAGGGGAGAGGAGGGAAAGGAATGTGACCCATAAAGGGACGGTACCGACCATATTACTGCTAAGGAAGTAAGGGGCTGGGTTGCGTGAGGCGCTGCAGGATTCACAATTTAAGGTCCTCTCTTTCGTGCAAACGGGGCAAAGGCACACTCAGATGTTGCTGGAGTTCAGGGTGTGCTCTGGAGGTCGAGGCCGAGGCCGAGGCCTGTGGGCTTCAGTATCAAACCCCCGTAAGATTCGGTACCACCCCACCTCCGAGCCTCAGGTTCCCCTCACCCTCTATGGAGTGACTAAGCGAGCTCAGACATTCCACAATTCCCTTCCCCGAGGTAAAAGGAAATACCTCAAGCCCAGGCCTTGGCTGTGAGGCCCCATCTGTTCAAGGACTGCGGGTAGGGATGGACGGTTGTCCCCACGCCTTGCGTTGAGGGGTTCCTCTGCACTCCCTTCTAAGGGGGAAAAAAGGCTACAAAACACATGAAAACTAAAGTTTTGTTCTCCCAGCTTCTGAAGTGACATTTTCGGGAGCAGTGTGACCCTTTAACTTCTAACACTGCCTTAAGAGACAGAACGTTTCCTTTTCACGTTCCCCGCCCTGTCCGCTCATCGTAGCACTTCTGCACGGGACCGTGCGCTGAAGCGCACCACTGCCTCAGCCGCTTCCAGTCTTAGCGTCTCCTAAGATGGCCGAGGCCGCTTCCGGCTCCTCCCCTGCCGCGGCCCCGCCCACCACTCACGTCAGCCTTCGCCTCGGAAGTGGAAGTAGTGACTGAGGTCAGGGGGCGGGATCGCTGCCTGGAGACGGCGGGAGCGGTTTCGCCATGGCGGCCGGGCCGATCTCCGAGCGAAACCAGGATGCCACTGTGTACGTGGGGGGCCTCGATGAGAAGGTTAGCGAACCACTGCTGTGGGAACTATTTCTCCAGGCAGGGCCAGTAGTGAACACGCACATGCCAAAAGATAGAGTCACTGGTCAGCACCAAGGCTATGGCTTTGTGGAATTCTTGAGTGAGGAAGATGCTGACTATGCCATTAAGATCATGAACATGATCAAACTCTATGGGAAGCCAATACGGGTGAACAAGGCATCAGCTCACAACAAAAACCTGGATGTGGGGGCCAACATTTTTATTGGGAACCTGGACCCAGAGATTGATGAGAAGTTGCTTTATGATACTTTTAGCGCCTTTGGGGTCATCTTACAAACCCCCAAGATTATGCGGGACCCTGACACAGGCAACTCCAAAGGTTATGCCTTTATTAATTTTGCTTCATTTGATGCTTCGGATGCAGCGATTGAGGCCATGAATGGGCAGTACCTCTGTAACCGCCCAATCACTGTGTCCTACGCATTCAAGAAGGACTCCAAGGGTGAGCGCCATGGCTCAGCCGCTGAAAGACTTCTGGCAGCACAGAACCCACTCTCCCAGGCTGACCGCCCTCATCAGCTGTTTGCAGATGCACCCCCTCCACCATCTGCTCCCAATCCTGTGGTATCATCATTGGGATCTGGGCTTCCTCCACCAGGCATGCCTCCTCCTGGCTCCTTCCCACCTCCAGTACCGCCTCCTGGAGCCCTTCCTCCTGGGATACCCCCAGCCATGCCACCACCACCTATGCCTCCTGGGGCTGGAGGACATGGCCCCCCATCAGCGGGAACCCCAGGGGCTGGACATCCTGGACACGGACATTCACATCCTCACCCATTCCCACCGGGTGGGATGCCCCATCCAGGGATGTCTCAGATGCAGCTGGCCCACCATGGCCCTCATGGCTTAGGGCACCCCCACGCTGGGCCCCCTGGCTCTGGGGGGCAGCCACCACCCCGACCACCACCTGGAATGCCTCATCCTGGACCTCCTCCAATGGGGATGCCCCCCCGAGGGCCTCCGTTTGGCTCTCCTATGGGTCACCCAGGTCCTATGCCTCCGCATGGTATGCGTGGACCTCCTCCACTGATGCCTCCTCATGGATACACTGGCCCTCCACGACCTCCACCCTACGGCTACCAGCGGGGGCCCCTCCCTCCACCCAGACCCACTCCCCGACCTCCAGTGCCCCCTCGAGGCCCACTTCGAGGCCCTCTCCCTCAGTGATTTCTCATTGTTTTTCCTCCTGTCGTAGCCTCCCAATATCTATTCACTTCCTTGGACCAATCAGAGCTGCTGTAGCTCCGAGGGGCTAAGGCGCTAATCCCTCTCAGGCCTTTCTTTTGTAAGTGTAATTTTTTCACAGGAGGCTTTATTTTATTTTATTTTTTCCTACGTTGGCCCTAAGTGTTTTACAGATACCCAGAGAAAATTAAACTAAACTGCTTGTTTATCA EMBV3_35229 TCCCTTCCGGAGCTTTGAGATCTAAAACTTCTGTTGCTTTTGCCATTCCAAAACCTTGTC Gene GeneID:281961|OSTF1:NM_174409:29_cdna Constitutive 3 NULL GeneID:281961 8 GENE OSTF1 MGC137137 osteoclast stimulating factor 1 EMBV3_40065 AAAAGGGACCCCTGAAGCTGAAAGGAGTCACAGAGCTTGGCGTGACCAAGTGGAAGAAGA Gene GeneID:617986|LOC617986:XM_002695519:346_cdna Constitutive 0 NULL GeneID:617986 18 GENE LOC617986 NULL similar to mCG125076 EMBV3_36245 TGGCCCTCGATGTGCTCTGCGTGTTGCTGGCTTTACCTTCAAGCCAGAATGAAGGGAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02452 GATGTGTGGAAGTTCAAGTTGACAAAGAGGTGCAACTGGCTACAGACACAACTGGAGGTG Gene GeneID:540113|ATP6V1E2:NM_001079613:155_cdna Constitutive 0 NULL GeneID:540113 11 GENE ATP6V1E2 NULL ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2 EMBV3_12468 GCCACCCACACCCCTCAATATTTCAGAAGGCTCAAGTTCACCAGAAAGAACTTCACCACC Gene GeneID:613629|SIRT1:XM_002698855:429_cdna UTR3_Alt 2 NULL GeneID:613629 28 GENE SIRT1 NULL sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) EMBV3_26742 CACACATGGGAAGAATGCAAGAAAGCCCTTAGTCCCCCACGTACATTTGTTCAGGACGAG Gene BVV0101_004052 + 0 NULL GK000018.2:65528386-65553125 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085062 TCONS_00085056 TCONS_00085067 TCONS_00085068 TCONS_00085063 TCONS_00085064 TCONS_00085065 1 XLOC_051771 Coding TCONS_00085056 XLOC_051771 Coding Coding LOC789960 18:65518939-65546306 j TSS63601 2820 1 TCONS_00085056_3 597 0.201418439716312 4 0.897098589490609 0.00154334816372868 0.000793103322660806 0.00121017754533054 0.000635865863121898 0.000531022141319162 0.000256956573369912 0.000241037455628865 0.00106929732479631 0.00133155060165926 0.000501584499862132 8.79907295864972e-05 7.30035322475643e-13 3.33005975317503e-05 0.000174726102039713 0.000126760811716051 0.00300487564390045 1.33023131452983e-14 1.81356263145826e-11 0.000809089478696888 0.000611388963793036 0.000269510031823318 5.64710341326704e-11 0.00139517992423044 0.00140367962410133 0.00148934324283321 0.00102150885532309 0.000718832056208622 0.000289153179202046 0.000165075066192078 0.000426748101535576 XM_005195519.1 ZNF154 PREDICTED: Bos taurus zinc finger protein 154 (ZNF154), transcript 0.0 1737 80.28 0.672340425531915 NM_005773.2 ZNF256 Homo sapiens zinc finger protein 256 (ZNF256), mRNA. 0.0 791 69.53 0.68936170212766 TCONS_00085056_3 sp|Q9Y2P7|ZN256_HUMAN ZN256_HUMAN Zinc finger protein 256; 0.0 625 56.38 0.994974874371859 8 coding 0 0 0 0 -0.0546265401016297 0.651535050043505 -0.00369580933203924 0.954259941552749 GCTGGTCCTGTTCGGTGTGAGAGGGCTGTCAGGACCCGAGTGACCAGAACAGGAAGGTCCGAGAGGAGGCGCTGTCGTTGCTGCACAGAGACGGGTCTGAACCTCGGCGGCACCGCCCGGGGTCCGCCGCCCCCGGGTCTCCCCGCCTCTCCTAGCCCTGCTACCCCCAGAGTCCGATGGCGACGGCGGCGGCTCTGAGGGAGCAGCCTCAGGTCAGTGTGAACTTTGAAGATGTAGCTGTGACCTTTTCCTGGGAGGAATGGGGTCTCCTTGATGAGACTCAAAGATGCCTGTACCGTGATGTGATGCTGGAGAACTTGGCACTTATAACCTCCCTGGGTTGCTGCTGTGGAACAGAGAATGCAGAGGCACCTTCTGAACGGATCACTTCTCTACAAGTGTCACAGGCTAGGACTCCGAAGGCAGCTTTGTCTACTCAGAAGATGAACCCTTGTGAGATTTGTGGTCCAGTTTTCCGCTTGGCTGAGCACCATGAAACACAACACATCCAGAAACTGTTGAGGTGTGGAGCATGTGTGAAACACTTCTGTTTTAGTGCAAACTTTCAGCAGCACCCGGAGCAGCACATGGGAGAGAAAACCCTCAGAAGCAGCGTGGACAAGGCCTCGTTTGTGAAGAGCTGCAGCTTCCATGTGTCACAGAAGCCATTTACCTGCAGGGATTTTGAAAAGGACTTCCTGACCATCATGGTTCACCTGCAGCAACAAGCTGTGAAGAAGCCAAACATAGTCACCCAGTGCGAGTCAACCTCAAATGTCAGGAAAAGTCATCACACATGGGAAGAATGCAAGAAAGCCCTTAGTCCCCCACGTACATTTGTTCAGGACGAGGGTGTCCGCACTGGCAGACCTTGTTTTGTGTGCAGTGAATGTGGGAAAGCATTCAGGTACAAATCCTCATTTGTTGTGCACCAGAGAGTCCACGCTGGAGAATGGATTCATGTGTGTGGTGAATCTGGAAAATCCTTCAGGCAAAGCTCATCCCTGTGTCAACATCAAAGCATTCAGACTGGGGCAATGCAGTACAAGTGCAGCAAATGTGGGAAATTCTTAAGCCACAAATCTGTCCTCATTTCTCCCCACACATGGCACAGTGGAGAAAACAGTTATGTTTGTAGTGAATGTTCGAAATCTTTTACCTCTAGCTCAGCCCTCACTTACCATCAGAGATCTCACACAGGAGAAAGGCCTTATGAGTGTAGTGACTGTGAGAAATCTTTTGTCTCTAGGCCTGCCCTCAGGTATCATCAGAGATCTCACACAGGAGAACGGCCTTATGCATGCAGTCAATGTGGGAAGACTTTTACCACTAGCTCTAACCTCCATTATCATCAAAGAGTTCACACTGGAGAAAGGCCTTATGAATGTAGTGAATGTGGAAAATCTTTTAACAATAGGTGGACACTCATTCAACACTGGAGAGTCCACACCGGAGAAAGGCCTTTTGAGTGCAGTGAATGTGGGAAGTCCTTTAATCGAAGAAATAACCTCATCTTACACCAGCGAATTCACACAGGAGAAAGGCCTTATGTGTGCAATGAATGTGGGAAATCTTTTACCTTTAGCTCCAGCCTTCGTTATCATCAGAGAGCTCACACTGGAGAAAGACCCTATGAGTGCAGTGAATGTGGGAAATCTTTTATCTCTAGGTCTGACCTCCATTATCATCAAAGAGTTCATTCTGGAGAAAGACCATATGAGTGTAGTGAATGTGGGAAATCCTTTATCCAAAGAAATAACCTCATAATACACCAGAGAATTCACACAGGAGAAAGGCCTTATGAGTGCAGTGAATGTGGTAAATCTTTTACTTGTAGTTCCACTCTCCATTATCATCAGAGAGTTCACACTGGAGAAAGACCTTACGTGTGCAGTGAATGCGGAAAATCTTTTATTACCACATCCAAATTGCGTTGTCATCAGAAAGGTCATATTGGAGAAAGGCCTTAAGAGTGCACTGAATGTGGAATATCTTTTGTAGGAAAAATCTAACCCCTTTCAACATCAGAGTTCACACAAAGGCATAGATAGGCAGGAAATGTGGTTTCAGCATTCAGTTTATGGGCACTGGAGGAAACTTTCTGAGGAGCCAGTCTGTCTTAATTGACTTTCATCCATCTGTGCATAAACAGTGAGAGAAGCCCTGGTTATGTGTGAAGCCTGTGTGACTGTGTTGCACTCTCCAACCTATCCAGAGTTCTTGCCACATTTATGTCACTGCCATCTCTGTTCAGTTAAGTTGCTCAGTCATGTCCGACTCTTTGCGACCCCATGAATTGCAGCACACCAGGCCTCCCTGTCCATTACCAACTCCTGAAGTCCACCCAAACCCATGTCCATTGAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTGATCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTTGCACGAGGTGGCCAAAGTGTTGGAGTTTCAGCTTTAGCATTATTCCTTCCAAAGAACACCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGATTTCCTTGCAGCCCAAGAGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGCGCTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGATGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTGTCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGCATCTTGTAATTTCATGGCTGCAGTCACCATCTGCAGTGAT EMBV3_11260 AGACAGAGGTGCTGCTGCAGCCCAACCCCAGGAAGACGCTGATCAAGGTGGCGGAAGCAG Variant GeneID:504750|SH3GLB2:NM_001076802:28_cdna 370^498 2 EMBV3_40116 GeneID:504750 11 GENE SH3GLB2 MGC142738 SH3-domain GRB2-like endophilin B2 EMBV3_18254 CGACTCCATACAGGAGTGCTGGAGATGACAGATAAAAATAGGTAAGCACAAGGCCCAGCC Gene BVT0102_162829 + 0 NULL GK000022.2:43548274-43553715 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128611 TCONS_00128613 TCONS_00128609 TCONS_00128610 TCONS_00128612 TCONS_00128614 1 XLOC_077922 Coding TCONS_00128614 XLOC_077922 Coding Coding ABHD6 22:43549339-43617625 j TSS95900 7105 1 TCONS_00128614_4 281 0.0910626319493315 14 0.896155817529472 1.15358082914603e-91 9.10143303772683e-44 2.86665778894283e-07 0.000493765179414186 0.000756422298671231 5.01592946090487e-42 0.000263481885784477 0.000551436153211071 0.000600186236889282 0.000408236888648831 8.44846894101444e-06 7.66560571512879e-06 1.68232109820052e-11 0.000132588070066999 3.25643239485214e-12 0.00288607827849709 0.00187210369735006 0.00367171699850295 1.17893318809305e-120 0.000670518978761852 4.83933461050946e-05 0.00225054531627272 0.000769053539397283 0.000364198574131333 6.66284954476011e-17 0.000283137645085592 9.59688385887219e-15 0.000492518708030964 1.53678296703799e-05 0.000928236905422658 XM_005222813.1 RPP14 PREDICTED: Bos taurus ribonuclease P/MRP 14kDa subunit (RPP14), 0.0 1.098e+04 99.97 0.857142857142857 NM_001098783.2 RPP14 Homo sapiens ribonuclease P/MRP 14kDa subunit (RPP14), transcript 0.0 1312 87.09 0.152568613652357 TCONS_00128614_4 sp|Q1LZ86|ABHD6_BOVIN ABHD6_BOVIN Monoacylglycerol lipase ABHD6; 0.0 587 100.00 0.98932384341637 3 coding 0 0 0 0 -0.198970170447114 0.803489024369761 0.0137026720558325 0.802432265990142 GTCCGAGCTGGGGGCCAGGACCAGGGACGGACGTCTGGATAGCGCAGGGGTTGCAGACGGCTGAGGTCAGGTGAGAGTCTCCTTTTCAGCTTCTGCCAGAGCCAGTAGCAGTTGGGAAAGAAGGCTGTGCTCTTTGAAGACCCCTCTAGGTATAAGCCAGACCTAAAGAGCAGGATGGATCTTGACGTGGTTAACATGTTTGTGATTGCGGGTGGAACACTGGCCCTTCCGATCCTGGCATTCGTAGCCTCTTTTCTCCTGTGGCCTTCAGCCCTGATAAGAATCTATTACTGGTACTGGCGGAGGACGCTGGGCATGCAGGTCCGCTATGTGCGCCACGAAGACTATCAGTTCTGCTACTCCTTCCGTGGCAGGCCTGGCCACAAACCTTCCATCCTCATGCTCCACGGGTTCTCTGCCCACAAGGACATGTGGCTCAGCATGGTCAAGTTCCTCCCGAAGAACCTGCACCTGGTCTGCGTGGACATGCCAGGGCATGAAGGCACCACTCGGTCCTCACTGGATGACCTGTCCATAGATGGGCAAGTCAAGAGGATACACCAGTTTGTAGAATGCCTCAAGCTGAACAAAAAGCCCTTCCACCTGGTAGGCACCTCCATGGGCGGCCACGTGGCTGGGGTGTATGCTGCTCACTACCCATCAGACGTCTGCAGCCTGTCCCTTGTGTGTCCTGCGGGTCTGCAGTACTCAACTGATAATAAATTTGTGCAACGGCTCAAAGAACTGCAGGAGTCGGCCGCCGTAGAGAAGATTCCCTTGATCCCGACCACCCCGAAGGAGATGAGTGAGATGCTGCAGCTCTGCTCCTACGTACGCTTCAAGGTGCCCCAGCAGATCCTGCAGGGCCTTGTTGATGTCCGCATCCCTCACAACACCTTCTACCGAAAGCTGTTTTTGGAAATCGTCAGTGAGAAGTCGAGATACTCCCTCCACCAGAACATGGACAAGATTAAGGTCCCCACGCAGATCATCTGGGGGAAACAAGACCAGCCTTCTTGACTCAAGGTAGATGTGATCAGCACTGGAAAAAGATGCCAGCCCCAGCTACCACATATGAAAGAATTGTTTACAAAAATCCCTCTGAGTACCACTACATGAAAGTCCGCCTAGAATTTCAAGATGGTGGTGTTGGACTGACTGCTGCGCAGTTCAAACAGCTGCTTATTTCAGCCCTAAAGGACCTGTTTGGTGAGGTCGATGCTGCCTTACCTCTGGACGTTCTGACCTATGAAGAGAAGACCCTGTCAGCTATCCTGAGGATATGCAGCAGTGGTCTTGTCAAATTGTGGAGCTCTCTGACCCTGTTAGGATCCTATAAAGGCAAGAACTGTGCTTTCAGAGTGATTCAGGTTTCTCCATTTCTCCTTGCATTATCTGGCAATAGTAGGGAACTAGTATTGAATTGAGTAGTCTTCAATTTGAGAAAATATTCCTCACTCTCAAAAGTACTTTTTGGTGCCAGCATAATGTTTGGAGACCGAAGCAGCCCAAAAGCTCCTGTCGATGAGATTTGAGAGTGCTGAAGATGTTCCCAGTAATGTCCAGCCATCGCCTTTGGTGGGGTAGGCTTCACAGGAGAATCTGCCTGAGCCAAACAGTGCTGAACAGGCAGCCCTTAGGGCACATGCACCTCAGAGTTGGAGACCGGGCTGAACTCAGGAGGGCCTTCACACAGAGGGACGTGGCCACCTTCTCAGAATTAACAGGGGATGTCAATCCTTTGCACTTAGACGAAGATTTTGCAAAACACACCAGATTTGGAAAGACAATTGTCCATGGAGTTTTGATCAATGGACTTATTTCAGCTCTCCTCGGTACTAAAATGCCAGGGCCAGGCTGTGTGTTTCTTTCCCAGGAAATTAACTTTCCAGCCCCTTTATATGTTGGGGAAGTTGTTTTAGCTTCTGCAGAAGTGAAAAAGCTGAAGCGGTTCATTGCCATTATTGCAGTATCATGTTCTGTACTAGAAAGTAAAAAGACCGTTATGGAAGGCTGGGTTAAAGTTACGGTCCCAGAAGCTCCCAAATCCTGAAATACGTCTTTAGAGGTACAAGTTCAGGCATCAGTGTTGTTATTGAAAGCCTCTGGGGAAAACAGGGATTGCTGTTCATCAAGTGCAGGCTCATAAACCTGTACTGGGGCAAGGGAGCAGGTAGAGAGATGTTCCAGTGTCCACTTAGGCTTCACTCCGGCTTAAGTATATTCATCATCTATCTAGGTTTTCAGCACTGAAAAAAATAGGCAATTCCCTGGTGGTCCAGTGGTTAGGACTCTAGGCTTTCACTGCCAGGGGTATGGATCCAATCCCTAGTCAGGAAAGTAGGATCCCACAAGCCATGTGGCACAGCACGCCCGTGCGCGCACACACACACACACACAAGTGAACAGAGGAGATCAGAGGTGATTCTAAGGTTGCACACTGTTAACCAGGCTCCCATAAGGTGCCATTAAAAAAGAAAAAAGAAAAAACTGAAAAAAGTGTTAGGAAAGTTACCGTTTAGCTTAATGTTCTACTTTTAGGATTTCAAACCTAATTAGATTTGCATTCAGATAACACAAACCTACCTATATCCGTGTAGAATAAGAATTTACTAAAGTCACTGAGTTTATAAATAGCAAGCATTTAATTATTAAAGGCAATGATGGAAGATATGTCATCTTTGAACACCTATCTTTTAACAGTAAATATTGTTAGATCTTGTTCTTCAGCAGTTTCTGAATCAGAGTTTATTATAATTTGTTACTGTTTACACCAACATGGTGATTTATTGACTCTTCAGTGTCACCTGCCCTTCAGATTGTTTTCCTGTCACTGGGGGAGGGCTTGTGTGCATCTTTGGACTCGGTTCTGCAAGCTCTCTTGGTTTCATCTATAAAGCAGTGATAACGACTCCATACAGGAGTGCTGGAGATGACAGATAAAAATAGGTAAGCACAAGGCCCAGCCTCTGAACAGCAGCTACTGCTGTTGGCATTCTCATCTGTGAGCAAGGCTACAGGTTTCCTGAGTTTGGAGCTATCTGGCCAAAAATTAAAGAACAGATGAATCTTTCAGGATGTCAGCCAGTCTCCATTGGTTTTCTAAACCTGGAATAGATCTTGAGTGCAGAGTTTCTATTTTAGCAATCCAGGTGATTTTCTCTCTCCCTTGAAAATATTTTGGGGGTCCCCACCCATTATATAAATAATACATGCTTTTATTAAAATAATTATAAGATTAAAAAAATTGAAGGAACACTGTGGTGGCCAAGTTCTTAAGCATTGAGGGGTGTTAGAGAGGAAACGTGCCTAATTTGTTATTATTGGTCATCCTGTACACAGCCAGCACTATTAAGACAATCTATGGTAGAACATACAAGTAGTCCATCTGTGCTCTGTGGCTTTAGATGGTGGCTCAGACCACAGCTGGTTGCTTTGATCAGGAAGATAAGATCAAATTAATTGGTTGCATCCACCCACATTTCCTGGAAAAAAATTTTCCTGCTGCTGGATGGGTTAACTAGATTTTTTTTGTTGTTCACATCAAGGGGATCCTTAAAACAGACTACTAGAAAGAATTGTTCTCATCACCAGAGGGCAGTGTTGTGTATAAATGAGTAGTTTAATATTGTACCATAGTCCAGTTTGTGTTGGTAACGTGGAAAATACCAAAATCAGGGTGCAGAGCAAGGATACCGTTATCATGAGTTTCAGAAGGGAAAGCTTATACGGCTTCAGGTTCACCTAAAGAAGGTGTATGTGTAGGTGAAACACGATACATGCAGATAATTGGATGTGACACTGGAAAACAAAACGGAGAACTTGAGTCCCAAACACTTGATGCTGAGACCATCTGTTCCTGCAGAACTCATTCTCTGGGACTTAATGGGAATCTTGAAGGATGGGTCTGCAAGTGGAGTGTGGTGTGATCATTGATACTATAAGTTACCATTCTTTCAATGATAAGCCAGGTTTCTACAGTAATTCTAATCCTTTAAACAGTTTTATGAATTTACTGTTCCATTTTATGGGCTCTATGACTTGCCCAGGGTTGTCAGCTAGTATGCAGTGGAGCTGGGATTCACACGGGCATGCCTGGCTCCAGAGCATTTCTTTTTTCCATTACCCTGTGGGTCTTAAAATGTTCCCATACTGGAACACTATCAGTTTCTATAATAGTATATTATGTTGCATTTGTATTTGGAACTACCATCGTACATAATTTTTTTTCTATTTAGAATATTCTAGATCTTATTCCCTGTTACAGTTTTAATGTTTTCCTCGCTGTTACTTGATGGCTTCTACCAATACGTATTGCCTGCACTTTTTCTAAGTTGATGTTCAGTGCGTGTCTTCAGAGCAGAATTACTGAAAGAGTTATTCAAGGATGAAACTGTGTGCAAGTCAGGCGTGGTGGGGACTGTGTACATGAGATCTGATGGATAGCTGATTAATAGTGTGTAACTTAAAGTAGCTTCTCAGTAGGAATGTTTCTTTTTTTTTTTAATTCTCCATAGATGTCATGGTCTTTGATCTTTATAAACCGAAAAAAGATGGAACAGAGAAGTAGGCAAGGATTTAGGGAGACTCTGTAAATGATGACTTGTTATTTTTAACGCTGAGCCAAGATTCTCAGACCACTTTCGCTTTGTTGAAGCTGACTATAACACAAACTAGCTGGCTGGCTTTTTCATTTTGAGCTCTCTACAAGTTGCCAGAAAGAGTGACTCTTCTAATGAAAGCACGAGTGACTCTCATATAGGAAATCCTCTTCCAAGTAATTGAGAGTGGCCTTGACTGTCCAGGGTCACCAAGAGAAGTGAGTACCCAAGTACCACCTGAAAGAGCAGGGCACATTGTCCCAGTGCTTGCCATGTAGGGGCGTTATAAGACTGCAGTTTATAGGATGTTTGATCACCACAGAAATACACCCATCGTAAGCAATTGCAGCCTAATGGACTGGAAAATTGCTTAACAGATTTTTGTATTTGATTAGAAACATTTCCATATTGGTGAAACGCCACTCATTTCTTTTTCTGAGCAGTGAATCTTAAGTAGCAACAGGGAGAAAGCCTCCCCACAGCCACCATTCATCTTGCGTATTCAGCTAGAAAAATAGAACTGCTAAAGGCCCACTGGTACCTCTTAGGTAACCACAGGTTTTCATTTTGTGCTGAATTATTAGACATTTTTCTTTTTACATTCTTAGAGCATGATTAAGAGACCAATTTACTCCCAAAGAAAATTGCTACTAAATTACATCTATTAAGTTTTTATATTAAAACATACTCTACCAAAGGTTGACAGTCACTGAGCAGCTGTGCCACTCTGAATGCGTCATGTGCTGGCATAATTTATTAACTGACTGTATGCAAGTGCCGTGAAATTACTCTGGGGCTGCATTTGAGTATCTCCAGGGTCCCGGATGTTTCACTCCCTTTGTCCTTGGATTTTCTTCCTATGGATTACACACAGAGACCAGAATTCTCAACATCTTCAGAGAAATTTTGGTTTGCAGAAAAATCATAAGAAAACCCAAGACGAATGTGGACACTACATAGATAGAAAAGAATTAATAGAAGGCTCCACAAACAGTCGATTTCTAGGCCACAGTCAATTTCTTGGGTGGCTCTTAGTGAGGCCACAGTTCACATGACCTTATAAACCATGAGCAAAATTCCTCTGCGATGTGATGAAAAATTCCAGTATGTAAGGGAAGTAAGAATGATCACAAGTGACTTGAATTTTTTTTTTTTTTAATCCAGATCATGAATATTTAAAGAAAGAAAATAATTCTGAATGGGGAGGCAATGCTGCTTAGGAACCACTGAGTTTTTCACTAGGTTCTATGAGGATTTGTAGAACAGTTGCCAGGTCCAGAAGCGTCTTCACTAAAAATCATTATTTTCAGTCAGTCTGGCCAAATGTCAAGCTGTTTAACAACCTGTGGACTATCTAAACATTTGGCAGCATACAAGAATATAAATCTTTCTTTATTTTCCCTTGCAGTCCTGAGTAGTTATGTATATAGCAACAGAAGTACTGCATATCTCATTTGCTTTACCCAGTATGAGACTGGAAGCAAAGTAGATTTGATTCACATCAGCTCTGGACTAGGGAGTTTCGCCACATTCACCGTGAGCCACTTCAAAAGCCAAATGGCTTTTCAGACTATCATAGCCTAGTCTCCAGAGGATCCAGGGATCCAGTTAAGTCTAGGCTCTTTAGGGCACTGATTTGGGTAGTTGAGATTATAAGGCTGCTATAGTATTTTATTCTCAGAGGCTTCAGGCAAGAATTCCTCGAGAACAGGAAAGCCTAGATTTAGAGTTGTTAGTCCCTGGCTTCATTCCATCAAATACCTGATTTCTGACTTTCAGTTTCATTTCCTTAGTAAGGAAGAGGACAGGCTGTCATTTGATGACCTTTGCAACTCAGTTGTATATTGTTATGTTTTTTCCTAAACATACAAGTAAAATATTTTTAGAGACATTTTGAAAAGTGCAGAAAAACAAAATAGCATCATGATTCTGTTTACTAAAGACCCTCAGCTAATATTTTGGTGGGCTTCCTTCTGATGTTTTTCCTATGAACATTTTAAAATCTTGAAATCATAAAATGCATACATTGGGTTTTTTTCCTACTTACTGTTGTATCTAGGGCTTTCCCCAACATCATTAAGTATCCTTTGATAATCTAATTTTCAACCTTTGTAAAATACTTATGATTGTATCACGATCTGTCCAGTCTTCTGTGTTAGATATATACCTTTGAGTGCTATGTATTTGTACTGATCTCTGAATATCTCCTTAGGATAATCTACAGGCAGGATTACTGGGTGAGGACATTTTGATGTGTGTGGTCAAATCCCAGCTGCTAGTGCCAGACCTCTTACATGGTTAAGTACTCAGTAAATAATTGTTGAGTGCATAAATGCCCCAATTTATATTCCCCCAGCAGTATGCAAGAAGAGCCTTGTCTCCGGTCAGCCCACATGATATGAATAATGATTAAAGCCAAATTTTGGTTTCTGTGAATCTGTTAATGAAATAATGCATTTGCCTTAAACAGAAGTAAAAAGTGAACCCTCCCTAAGTGATACATA EMBV3_31206 CTTATAGCTCCATTTTTCAGCATCCTCTTGTTCCTGTGGGGAATACTGGGGAAGGCAGGC Gene BVV0101_044460 + 0 NULL GK000013.2:18395891-18473634 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13844 CACTTGGAGGCCAAGATCCAACAGACACACAGCCTTGCCCGCCTCCTCACCAAATATGCT Gene GeneID:514803|CTF1:XM_002698094:124_cdna Constitutive 0 NULL GeneID:514803 25 GENE CTF1 NULL cardiotrophin 1 EMBV3_35848 AATACAACTGGCAAACAGCTTTTTGACCAGTGTTTTGGAGCAACACAAGCTGACAAAAGA Variant GeneID:517111|RDX:NM_001075749:8_cdna 221^591 3 EMBV3_21863 GeneID:517111 15 GENE RDX NULL radixin EMBV3_30362 CAGGTTGCAGCCAGAGGGGTTTTGTAATGACTCCTGTTGATTTTGGACTCCTTGCTGTGG Gene GeneID:537127|KIF4A:XM_002700028:119_cdna Constitutive 0 NULL GeneID:537127 X GENE KIF4A NULL kinesin family member 4A EMBV3_38087 CCATCAGCAGCACGGTCTAATGGGGACTAATTGGCGTCACGTTTTTCAACCCCAGTATTG Gene BVT0102_303048 + 0 NULL GK000007.2:25049531-25177741 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31018 CCTATGTTTCCCACCTGTGAGGCGTGAACTGTAGCTCAGGATAAAAAGAGGAGACTCAGG Gene BVV0102_411468 + 0 NULL GK000030.2:111490206-111513890 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253543 1 XLOC_156483 NonCoding TCONS_00253543 XLOC_156483 NonCoding NonCoding - X:111507932-111508619 - TSS190764 687 2 TCONS_00253543_1 38 0.158660844250364 1 0 1.9804501780365e-05 0 0 0 0 0 0.000101863976023274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.39813392609128e-05 0 0 0 noncoding CTTTTCTCGTCATTACCATCATCACCATCATACACTACTTGTAAGTTCCCTTGTGGTGTTTATACTTCGGAGAGAGCATTTTTTATTTATCTTTTCTTTGCCACGGGGTTCTCTTGCATTTTCACCAATCTTGTCATTGTACTAACCGAAGGGGAAAAATCCTTTGTAACTGCTTGATTGTCAAGTGCTACCTTAGGAATCAGGAGAACAGATTGCTCTTTTCACTGCTGCAGACTCAGGCCCAAGACTGAAAGCAAGTTTCCGGGTGAGAAGTTTTCCTGGCAATGCCTCTGCCACATTCTGTTTCAACTAGCTTTTTCTTTAAATTGGCCCCCAGAACCCTTTTTGCCTCGTTTTCTGCAACTCAGGTTGCCTGAGTCTCCTCTTTTTATCCTGAGCTACAGTTCACACCTCACAGGTGGGAAACATAGGAAGGATGTAGAGGTAATCCTGATCCCATCTATGACGGTGGGAGAGGAGTAAGTCAGGGTGTGTGGAATGGGAAGAGAAGACCACCTTAGGCCTACTGATAAAATAATAATTACACTTGATAAATCACCATGCACTTTGCCATCGAGGGTCACAAGCTTTGCTGTACATTGGAATTGCCTATAGAGCTTTTAAGATGCTGGCTGCTGCAGACACATCCCAGACTAATTACATGAGTCCCTGGGGCAGGACCTGGAC TCONS_00245492 . 3' 17728 TCONS_00245492 . 3' 18414 EMBV3_05506 TCCCCCCGGGACACCCGACCCCTTGGTGACTTGGGGATCTTTTCTATACCAGATTTGTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14401 AAATTAGCAGCAGTAGTTACTTTATAAGCTCGGACTTTTTCTACTGAAGTTATTTACTAC Gene GeneID:540507|ANGEL2:NM_001099110:99_cdna Constitutive 3 NULL GeneID:540507 16 GENE ANGEL2 MGC155123 angel homolog 2 (Drosophila) EMBV3_14446 ACCTTGAGAGAATGCTGGACCTCCACACCCATTGCAGCTCATACCTTTGCATCTCACCTT Gene GeneID:514172|NDST1:XM_002689294:135_cdna Constitutive 0 NULL GeneID:514172 7 GENE NDST1 NULL N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 EMBV3_38003 AATCACATGACGGTGTGGCCATTTTGTAGAAAATGAGCCGCGGTCTAGTGGGTAGGACTC Gene BVV0101_003642 + 0 NULL GK000021.2:69466253-69532884 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43158 GGGAGATAGAGGTGATCAGAAGGAGAAGAGGAGGAATCAAAAGAGGAGAGAGCAAGCTAG Gene BVT0102_447951 + 0 NULL GK000030.2:22083772-22436393 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187689 TCONS_00047409 TCONS_00218369 3 XLOC_113734 XLOC_027543 XLOC_131689 NonCoding TCONS_00187689 XLOC_113734 NonCoding NonCoding - 4:57449620-57449814 - TSS140057 194 0.963917525773196 1 0 0 4.70873199200095e-06 0 0 0 0 0 0 0 1.06043841381964e-05 0 0 0 1.2123713770435e-05 0 0 4.27895425582026e-05 0 4.31242025526583e-05 0 1.73867286170876e-06 0.00118805372437849 0 0 3.57138885551787e-06 0 0 0 0 0 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 3e-18 95.1 88.46 0.396907216494845 0 noncoding GGGGTAGGGAGATAGAGGTGACCAGGATGAGATGAGGTGGAATCAAAAGAGGAGAGAGCAAGCTAGCCAGTAATCACTTCCTTATGTGCGCTCTACAGTCTGGACCGCTCAGAGATGTTCATGGAGTTATACAGAGAAGAGAAGAGGAAGGAAGGAGACAGAGGTGGCCAGGAGGATAAAGGGGGGGATCAAAA TCONS_00181675 TCONS_00181676 TCONS_00181678 . 3' 132818 TCONS_00181675 TCONS_00181676 TCONS_00181678 . 3' 133011 EMBV3_24060 TCATCTCGGGACTCTCGGACCAGTAAATCCCACGAGTAATGTTGAAGCAGGTCTATGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07188 TAAACTGTCCCGGAGTGAATAAGAAGCAACTGTGTTTGGGGCGACTACCCTGGTGCTCCA Gene BVV0102_187871 - 1 EMBV3_40023 GK000003.2:56846709-56853714 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06144 GACACTCAGGATGAGACCCACTTACACTAAGGAACTGTTTGTGGTTTATCTGAAACCGGA Gene GeneID:520080|C16H1orf170:NM_001098048:145_cdna UTR3_Alt 2 NULL GeneID:520080 16 GENE C16H1orf170 C1orf170 MGC155319 chromosome 1 open reading frame 170 ortholog EMBV3_27684 CTTCAAAAAGAAAACTGCACTGAAGGAGTGTGACAGTCACTCTGGAGGGCTCGAGTGGCC Gene GeneID:785370|LOC785370:XM_002686729:111_cdna Constitutive 0 NULL GeneID:785370 4 GENE LOC785370 NULL similar to ATP-binding cassette, sub-family B (MDR/TAP), member 4 EMBV3_26213 GCGGAGTGCGGCAAGTGGCACATGTTTCAGAAATGAAGCAGATGAACCTCACCACGGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33609 ACTTATTTGGCCGTGGCAGATTTTTGAACTGACGCAGGGATCAACCCAGTGGAAGCATGG Gene BVT0101_065511 + 0 NULL GK000025.2:38974574-38984304 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39118 GGCCACCGCCGGCAGGCTGCTCTACGACATGTTTATTTGAAACTCTTCCTGGGCGAATCC Variant GeneID:534094|INTS10:NM_001099061:88_cdna 268^371 2 EMBV3_12288 GeneID:534094 27 GENE INTS10 MGC152159 integrator complex subunit 10 EMBV3_20247 GGGACTAGCTCGCGTGGTTACTGATAGCACCGAAGGGTCCTTTTTTCTTTGGCGTCAGAA Gene GeneID:539472|LOC539472:NM_001076165:190_cdna Constitutive 0 NULL GeneID:539472 10 GENE LOC539472 MGC137174 hypothetical protein LOC539472 EMBV3_23470 TTATCCCGACCCTTCCCAGTGGACAGATGAGGAATTGGGTATCCCTCCGGATGATGAAGA Gene GeneID:327713|NDUFB2:NM_175828:574_cdna Constitutive 0 NULL GeneID:327713 4 GENE NDUFB2 AGGG MGC133591 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa EMBV3_18170 TACACGGAGACAAAGATCTTACAAGAGAGAGAACGGAAAGAACTTGGTAGACTTTACCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20412 GTTTGGCTTCTCGAGACCCTGGTGTTGGGGCTTTTCACTCAGACACAAGCCTCACAGAGG Gene GeneID:281897|LAMP1:NM_001075124:33_cdna Constitutive 1 NULL GeneID:281897 12 GENE LAMP1 MGC140501 lysosomal-associated membrane protein 1 EMBV3_18342 CCAGACCCCCCAGAGGCCCACGGAGCCCAGCCCTCCTTACAGCCTGGAAAAAATGACAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12792 AAGGCAAATCAGCTGCTAAAAGTGAAAAACCCAGAGCTGGAACAGACGCTCAGTAGCCAG Gene GeneID:525772|PLEKHG1:XM_002690335:1_cdna UTR3_Alt 2 NULL GeneID:525772 9 GENE PLEKHG1 NULL pleckstrin homology domain containing, family G (with RhoGef domain) member 1 EMBV3_11717 GTTAAACTTGTCTCCAGCGCTAACCACAAGGGTGTGGTGTCTTCCTGAAGAACATTGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13671 CCTGCAGCCTGTAGCCAGCCACCCGGACACCTCACAGCCTGAGCCAGAGGAGCACCCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35885 CGCGCCGCAATGTCTACTCCGGATCAAGCGTACGTGGACCGGCCCTGCCTGGAGCCCAGC Variant GeneID:100138178|UBE2Z:XM_002695907:252_cdna 339^599 4 EMBV3_31872 GeneID:100138178 19 GENE UBE2Z NULL ubiquitin-conjugating enzyme E2Z EMBV3_40502 GGGTATGAGGGGGGTTGCATGTGCAGTGGTTGTGGGGAGCTGGGTGTAATTTATAAAAGA Gene BVV0102_219760 + 1 EMBV3_30670 GK000009.2:25018747-25263751 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236828 1 XLOC_144583 Coding TCONS_00236828 XLOC_144583 Coding Coding CENPW 9:25262819-25279967 j TSS177197 2276 2 TCONS_00236828_2 88 0.358084358523726 3 0.867440368577594 0.00423676342625689 0.00453133022118881 0.00405304166869909 0.00248650389196677 0.00216283864059998 0.00102132886547079 0.00171780551069347 0.00253561044939232 0.00314477902046386 0.00108159484443882 0.000466809114084615 0.000365534658078465 0.000575843585611276 0.0012015829121612 0.00110828723827837 0.00454700774768359 0.00134150031140356 0.00447098104185469 0.00612908350641936 0.00659286691944417 0.00198567358661866 0.00126476414301952 0.00391848693095987 0.00494981239953836 0.00554292571576883 0.00497613009644599 0.00510455238442778 0.000837522087498147 0.000832857867609459 0.0014187427123553 NM_001111261.1 CENPW Bos taurus centromere protein W (CENPW), mRNA. 0.0 1725 99.79 0.422671353251318 XM_005266966.1 CENPW PREDICTED: Homo sapiens centromere protein W (CENPW), transcript 0.0 720 71.46 0.585237258347979 TCONS_00236828_2 sp|Q5EE01|CENPW_HUMAN CENPW_HUMAN Centromere protein W; 3e-48 152 86.36 0.988636363636364 1 noncoding 0 0 0 0 -0.0266114777631469 0.926965427598456 0.0307861385587064 0.786836352900664 GTGAAAAATATTAGCTGCTAATATTAGAAAATCAAGCCCTGTTAAGAAGGCATTGGTTCTTTAAGAAGCCTGATAAAACATGACAAACTTCTTCTATTCATCTACTTTTTCGTTCATTGGTCTTAGGCTCAGTAGAGAGTGAAAGCTGGGACAGTAAGCGTGACTGCCTTAGCATACCAGCATTTTCCACAAATTTCCAACATCTTTATGGCACACTGGAGAAATCGCTTCCAACAGCTACTTAAGGTGAAACCCGCAACCCTCCCCGTCTGTGACGTCATGGAACGCCCACCAAGGGTGTGTTCCACCAACATCCGGGCGCCAAGGGGCGGGTTTGCGCGCCCCTAACGTCACTACCGGGCGCCGGGCGCGCTCTGTGGCGGCAGATTCAAACGTTCCGGCCGGGGTCTCGGGACCTGTGGGAGCGTCTGAGTCGGGGTTCTTGGTGTACTCGCTGGCGTGAGCTCTAGTGCTGCGCAGGGAAGACCCAGGAAGTTGAGGCGGCTGCTGCCAAAACCCGAGGGTGAGAATGGCGCTCTCCACCACGGTCTCGCAGAGGAAGATGATAAGGCGCAAGGCTCCTCGCGGCTTTCTAAAGCGCATTTTCAAACGACAGAAGCCTCACCTTCGTTTGGAGACGAGTAGCGACCTACTGGTGCATCTGAACTGTTTACTCTTTGTTCATCGATTAGCAGAAGAGTCACGGATAAATGCTTGTGGGAGTAAGTGTGGAGTCATTAAAAAGGAGCATGTACTGGCTGCAGCAAAGGTAATTCTAAAGAAGAGCAGAGGTTAGAAGTCAAAGAACACATATTTGAAAATTGTATGATGTATTATTTTAGGTGGTAACAGATCATGAAAGCACTTTTTATAAAGTAGTTAATATTGTGTATTAAAACATTGGCTAGTTGAAGGATGTGTGTATTTGTATGTTTTTTGCTATATTGAAATATCTTATACATGTAGAACTATATAATCTTTGTTTTTGAGGAATTATTTCAAGTTCATTTTACTTCCCTTTTGTTGGTATTGCAAATGTTTTACATATCATAAATGAAATCTTAGTGTATGAAGTAGCTTGAAGAGATGTATTTCTTAGAATTAGGTTTATAAGTATTTAGATGTACTCACTGTTAATTAGGGAATCAATTTAATCTCTGAAGGAAGACAATATACAGTCAAATTTTAGATACATTTTAAATATTTTAACTGTTTAATACCTTTTCATAAGCAAAGCAGTCTGCTTTTATATTAGGCCAATAGTATACTGAAATAATTTCTTGACTGTAAACACCAGCAGAGTGTTTTTAAAACCTATTTCTCTTCAAAACCAAAAAAAAAAAATTACAGAGCAAACAGACTGATTTTCTTCAAGTCACACATTTAATAGATAGGCGTCTGTTCCCCCAAGAAATCATTTATTGTGTATCATTTAATAGTTGTGTTTTTACATTTTGTTTTTAAATAATTATACATTGCAACGTGAAGTTGCAAAGGTAGTACAGAGAAGTCCCCTGTACTCCATACCCAGTTTTATCCCAATGTAAATAATTAGAATACAGTATCAAACCCAGGAATTTGACTTGGTACAATATGTGTATAATTTTGTACCATTTTAGTACGTTTGCAGATTTATGTAATCACCACTCCTATCAAGATATAGAACTATTTCATCACCACAAAGTTCTCCATCATGCTTTTCTTTTATAAATTACACCCAGCTCCCCACAACCACTGCACATGCAACCCCCCTCATACCCCTACCATCTCTAAGCCCTGGCAACCACTAATCTGTTCTCCATCTCTATGGTTTTGCCATTGTGATGGAATCATACAGGTTTTGACTTTGGGGAATTTGATTTTTTCAGTTGTCTTAACTTTCTTGATCCTCCAAGTTGTTGCGTATAGCAGTTTGTTCCTTTTTTACTACTGAGTCATCCTATTCCCTGGTATTTATGTACCATAGTTTGTATAGCTATTTACTCATTAGGAATATTTTGATTATTTCTAGGTTTTTTTTGGTTATCATAAATAAAGCTGTTATGAACAATTGTGTACCAGCTTTTATGCAATTTTAATTTCACTGGGATAAATACCCAGGAATATTATTGCTACTGGGTTGAATGGTAAGTATATGTTTCAGTTCAGTTCAGTCAGTCAGTCGTGTCTGACTCTTTTCAACCCAATGGGCACACCAGGCCTCCCTGTCCACCAACTCCCAGAGCTTGCTCACACTCATGTCCATTGACTTGGTGATGCCATCCAAATGTTGTATC EMBV3_30920 TCATGATATATGCTGGAGAGGGTGTGGAGAAAAGGGAAGTCTTCTACACTTTTGGCGGGG Gene BVV0102_426364 + 0 NULL GK000008.2:53671023-53686441 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27756 GGCTGAGCCCTCAGGCAAGAGGAAGAGGACAGGAAACTGTTTTGAAAGCGAAGCTTCTTT Gene BVV0101_087241 + 0 NULL GK000030.2:35491956-35613767 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246696 TCONS_00246700 1 XLOC_151083 Coding TCONS_00246700 XLOC_151083 Coding Coding LOC100848554 X:35608846-35611392 j TSS184910 424 1 TCONS_00246700_1 141 4 0.834970530451866 0 0.000284389522859232 0 0 0 0 0 0 7.44351422563041e-05 4.00733313050675e-26 0 0 0 0 3.11821651990633e-06 7.4913114170618e-05 0 1.67494516390723e-38 0 4.90710670153023e-05 0 1.301918999866e-217 3.49166390827099e-134 0.000316045079714666 0 0 0.000718575180302335 2.2653669041332e-05 0 5.3963946414133e-134 XM_869945.4 LOC617648 PREDICTED: Bos taurus protein CXorf40A-like (LOC617648), mRNA. 3e-73 279 99.36 0.367924528301887 0 coding ATGGCCATTGCTATGTCTTGTACTGGGACACGCACGTACGAACAAAGGCGCTTTCCCTCGCTGGCCTTGTCTGCTAGGAGACGGAATAGGAGCCGCCACGCTCTGAGGTGCCTGGAAGGTCAGGCCGAGAGGAGCCTCGAGACTTGCGGCCTGGAGCGGGACCCGAGGGAGGACCAGGAAATGCGAAGGAAAATCCTCAGTTTCCTGCTGCCCCTGGGACCTGAGATGTCCCATAGAAAAGAAGCTTCGCTTTCAAAACAGTTTCCTGTCCTCTTCCTCTTGTCTGAGGGCTCAGCCCACCCAGGGCAGCCCCCTGACTCTGCTCCTGACCGCCGCTCTCCCTGCTGTGCCCCAGCCTCCCAGCCGCTCTCATCTGGGAGTTTTTGGGCGCCCTACATCTTCCTGCTGCCCACCTTTGCCCCCC EMBV3_32033 TGAATTTGGGACCTTGGGGGTAACCTCTCGTGTGTCCTGCCCATCCCCACTCTAGAATTT Gene GeneID:512642|TRAFD1:NM_001014908:141_cdna Constitutive 0 NULL GeneID:512642 17 GENE TRAFD1 FLN29 MGC139992 TRAF-type zinc finger domain containing 1 EMBV3_08426 ACGTTAAAATCGTGTTGTACAAGTTTATAATTGTTAACTTGATGTAGTTGATACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_10356 GCTGTCCTAACAGCTTCCTCACAGAGTTACCTTCCTTGAAAATTGCTGGCCTTTGAGACT Gene BVV0102_352216 + 0 NULL GK000009.2:15605477-15639155 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39965 TTCTTCCCCTACATGAACTTCCAGCAAACAGCAAGTCCAGGAAAACTTACTCAAGGAGGA Gene GeneID:530262|ZNF182:NM_001046311:90_cdna Constitutive 0 NULL GeneID:530262 X GENE ZNF182 MGC137263 zinc finger protein 182 EMBV3_17773 CCTGAGGGAATTGCACTAGGTAAAGTTAGTGTCAGAAAAACACCCAGGTGGCGTCACAGA Gene BVV0102_387757 + 1 EMBV3_24137 GK000018.2:65280019-65288703 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091953 1 XLOC_056722 NonCoding TCONS_00091953 XLOC_056722 NonCoding NonCoding - 18:65282291-65282949 - TSS69299 658 1 TCONS_00091953_1 51 0.951367781155015 1 0 0 0 0 0 0 0 0 0 0 0 3.4790033962014e-06 0 0 0.000350297786462092 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000175170844599505 0.000154934110824418 0 XM_005220735.1 TNS4 PREDICTED: Bos taurus tensin 4 (TNS4), transcript variant X1, mRNA. 3e-37 159 74.63 0.399696048632219 0 noncoding GTCCATGGGGTCACAAAGAGTTGGACACGACTGAGCGACTTCACTTTCACTTTCACTTACGATATAGTAAACTGGTTAAGTAAGCGTTTCCCTGACTTCTGGGAACTGTTCTAGCAAATAATCAAATTCAAGAAGAGTGATCAGAGGAAACTGATTTGCAACCAAATAGGACAGAATTTGTGGGTAATGGGGGAATCACTGCAACTGGCCTCTGAAGTGCGAGCCAGTCTTGTGGGACTGAGATCTTGACCTGAGGGAATTGCACTAGGTAAAGTTAGTGTCAGAAAGACACCCAGGTGGCGTCACAGAGAACTGGTTGGTGTGAGAAAACAAATCACACTTGTGGTATCAGAAGTGTTGAGTGTGGTTACTCAAAAAAAACACCTGTGATTTCCCTGGTGGTTTAGTGGTTAAGAATCTGCCTTGCAATGCAAAGGACACTGGTTCAACTCCTGATCTGGGGAGATCCCACATGCCACAGGGCAATTAACTCGGTGCACCACAATTACGGAGCCAGCACTCTAGAGTCTGTGCTCTGCAACAAGAGAAGCCACCACAGTGAGAAGCCTGGACACCTCAGCTAGAAGGTAGACCCCATTCTCTGCAATGAGAGAAAGCCTGCAAGAAGCAACGAAGACCCAGCACAGCCAAAAATAAG TCONS_00084993 . 3' 1490 TCONS_00084993 . 3' 2147 EMBV3_14511 GCGGGGGATTCTCAGGCTTCGGATCAAGCGGAGGAGGATTCACCTTTGGATCTTCTAACT Gene GeneID:784219|NUP214:XM_002691646:362_cdna UTR3_Alt 2 NULL GeneID:784219 11 GENE NUP214 NULL nucleoporin 214kDa EMBV3_16626 GGTAGAATTTAGGTGGGGTTAGGGAGGGTACTCCAAGCCCGTTTCTGGATCGAGGTAAGA Gene GeneID:524464|SEMA6C:XM_002686044:248_cdna Constitutive 0 NULL GeneID:524464 3 GENE SEMA6C NULL sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C EMBV3_05641 GTATGAATGTCTGTCAGAAGCCCCTTCACCTTATCGTCTCATGTTGTTTATATCCTCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00043 GTTGCTATGGACTGAGTGTTTGTGTCCCCTCCTAAAATTCGTATGTAGAAACGCCCCCGC Gene BVV0102_353639 + 0 NULL GK000025.2:7686225-7697899 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23773 TTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTCGCAACTCGAATGGAAGATT Gene BVT0101_027412 + 1 EMBV3_11783 GK000009.2:97006058-97010522 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27774 GAGATTCCCGAGCGGCGCCTAAGCTTCCTTCTAGAATTCATTCCTTGCCTGAGTGCTTTC Gene BVT0102_422601 + 0 NULL GK000018.2:59061758-59093152 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084501 TCONS_00084502 1 XLOC_051595 Coding TCONS_00084501 XLOC_051595 Coding Coding LOC100848991 18:59078379-59102248 = TSS63291 1020 1 TCONS_00084501_3 215 5 0.95747444276856 0.00229647448132126 0.00194812320313742 0.00159004634569025 0.00194878029215466 0.00246457007348266 0.00133008629884396 0.00187759689336301 0.000440901391511473 3.32898055321579e-07 0.00108716856775217 7.62461629946601e-10 0.000451442237641266 0.000296881476464892 0.000873559966618251 0.00177129652592457 0.00655807384813312 0.00526751837432834 0.0052725302506441 0.00429591909338083 0.00600149965790488 0.00195272217004958 0.00325667412317064 5.86064012500287e-09 0.00263266865362795 0.00524811988399354 0.00456579884377921 0.00330885218739089 0.000518129741845379 0.000832706759765121 0.00226970203087351 XM_003587311.2 LOC100848991 PREDICTED: Bos taurus zinc finger protein 677-like (LOC100848991), 0.0 1828 99.61 0.999019607843137 NM_024733.3 ZNF665 Homo sapiens zinc finger protein 665 (ZNF665), mRNA. 3e-83 313 68.48 0.823529411764706 TCONS_00084501_3 sp|Q96SE7|ZN347_HUMAN ZN347_HUMAN Zinc finger protein 347; 2e-44 160 40.71 0.995348837209302 4 noncoding 0 0 0 0 -0.269857207423996 0.259404469036486 0.00157849287857967 0.98088417277914 ATTCCCGAGCGGCGCCTAAGCTTCCTTCTAGAATTCATTCCTTGCCTGAGTGCTTTCTTCCCTTCATGTCGTACATTTGAAATTTTCTTCGACCTATGAAGACTTATGTTGCCTGAGGAAGCTCTGAAGTTAAAGAAGAGGAAGGAAAAGGAGTGAGGCATGGCTCTTTCTCAGGAACGACTGACCTGTGAGGATGTGGCCATCGAATTCACTCAGGAGGAGTGGGAATTCCTGGACCCTACTCAGAGGGCCTTGTACAGGGAAGTGATGCTGGAGACCTACAGGAACCTGCTATCTATATCTCTCCTACACATGTGATCAAGCATTTACAACCCAAAGCGACCAGTGATAAACGAGAAACATTCCAAACATTGATGCTGGGAAGACCTGAAAGCTGTGAAATCGAATGCTTTCATCTTTGGGAAAGTCAGGAAAATACGTGTGACTTTGAGTGTCAGGGGAGAGATGACAAAAGAAATTACAAAGGAACACCTGTTGGCCTTAATGGAAATGTGCCTGATGGAAGAGATTTGCATGATAGAAAGAATGCAGGGATCGAGCCCTTTGGAAACAGGCTTGGATTTAACTTTCAGGATAAACTGCAGATATTTCAAACTGGCGGGATAATTTCTGAATATTATGAAGTTGAGAGGTCTGTCAACAACAGTTTCTCATTTTCACCACTTCAAAGAACCACTGTTTCTAATATATATGGGAATGATTTCATGAATCCTTCAGTAGTAACACAAGACCTCAAAGCACAGAGGGAAAAACCTTACAAATGTAATGAGTGTGGGAAAGCCTATCTTAAGGGCTCATACCTCATTAAACATCAGGCCATCCATATAAGAGAGAAATCACATAAATGTGAAGTATGTGACAAATTGTTTGATCAAAGTTCACAGCTTGCACGTCATTTGAAAATTCATTCTGAAGTGAAATGTTACAAATGTAATGAGTGTGGCAAAACCTTTAATGATAGCTCCACCCTTGCTAGACATCAGATAACCCACTCAGGAG EMBV3_35838 TTCTATCAGATTTGTATCGTTTCCGAGGGAAAAGCTCGGGAGGCGTTCGGTTCAGGAAGG Gene GeneID:536092|PTPRM:XM_002697742:239_cdna Constitutive 0 NULL GeneID:536092 24 GENE PTPRM NULL protein tyrosine phosphatase, receptor type, M EMBV3_01920 TAAGCCCAACCAATTCGCCAAAGGGATCTTTGTCCTTTCCTCTGGGCCTCATACCAACAG Gene GeneID:513214|SNX27:NM_001098956:94_cdna Constitutive 0 NULL GeneID:513214 3 GENE SNX27 MGC159678 sorting nexin family member 27 EMBV3_07917 CAGAAAGGCATCTATTTCACCATGGTCAGTGTCCAGGCTGGAACAAAGCGCCAATCAACA Gene GeneID:281585|ABCB1:XM_002686731:117_cdna Constitutive 0 NULL GeneID:281585 4 GENE ABCB1 MDR1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 EMBV3_11370 CCCAACAGGGACCTGAGTCCACTATGAGAGGAAGTTTTTGGAAAGGCAGACAAGTGTCAG Gene BVT0102_441186 - 1 EMBV3_38131 GK000009.2:40123501-40231966 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237135 1 XLOC_144653 NonCoding TCONS_00237135 XLOC_144653 NonCoding NonCoding - 9:40172853-40220006 - TSS177353 1522 1 TCONS_00237135_3 105 3 0.967785035629454 0.000138137173895181 0.000233930681679747 0.000490030732467672 0.000204742149643962 1.09972185286847e-05 0.000270122073274833 0.00042985184739172 0.000268617592277553 2.63294431521311e-05 4.77468066393989e-05 0 0 0.000556612839804064 0.000440611440301109 0.000218549996476859 0 0 0 0.000379588918547097 0.000983512992999594 4.37467826774886e-05 0 0 0 0.000168337421820225 0.000162069789982755 8.4557126451934e-05 0 0 0 XR_232080.1 LOC101905383 PREDICTED: Bos taurus uncharacterized LOC101905383 (LOC101905383), 0.0 1790 100.00 0.651116951379763 0 noncoding 0 0 0 0 -0.0231742113804314 0.845424888376844 0.0050949829151323 0.914045447992187 GCTCCCCCCAACGGCCACCCGACAGGATCTCACAAATGTGGAGGTCATAACATCTTACCTGGAAAGGGATCCCAACAGGACAAATAACATTTAGAAGCTTTTAACAGAGTGCCTGATCTTTGGCAAACAGACTGCAGCCCAAGCACCAGGTGTGCTGGGAGTGAGCTCACCAGGAGCAGGGTGGTGACAGTGGAAGGCTCTCCTGAGTGCCTCCCTGGCCTCATTAGCACCTCACTCACTGCTGGGGACCAGAGTACTAAGATGAAAAAGCACCTTCATGGAGTGTTGGCCCCTTACCTCGGTTTCTACGTTGATAATGTAGAGGCTTCAATTCCCTCCAGATGTTCTCTATCAAGTCAGTCTCCTAGAATAATTGAAGGATATTATCATGGAATCTCAGAACCAGGAAGAGGAAGAGGCAGAGAGCTCATACCCCAAACACTTCCCAAGGGAGCCTGAAGATCATCGGAGCCAAAATACCATCTTGTAAACAAGGAAACGGGAACAGACAGCTTCACTGGATGACCCAGACAGGGCTAAGGTCTTGATTTTGCACTCAAGATGCCCACCTCTGAAAAATGATGTGCTTAAGTGTAAAATAGTCAGCTCTTAATGATGTTGAATTTTAATATGCATTCAGCTCACTACATCATTTACCCACAAGAACTACTCCAAACCCTGCTGGAATTTTCTATCATAAACTTTTCCAAGTCTTTTTGTCCATGTTTTCAGAGCACTTGTAGTAATCTGTTTTACTTATTCATCCATGCAGTAGAGCAAACTTCCCAACAGGGACCTGAGTCCACTATGAGAGGAAGTTTTTGGAAAGGCAGACAAGTGTCAGAGAGAAAGAGGAGGAAGAAGGAAGGAAACAATGAAAGCAATAGCCCATTTTTCAGGTCACTTAAAAAGGCTCCATTTGGACACTGAGCAGATTAGCTGTTTTTCTTTGCTTTTAGTATTTTTAAAGGAAATGCCCCCTCCCCATTTACTTGAACACAATACTAAGCACACACTTCTCCGCACGTAAATAGTCAGGCCGTTCCAGGTTTTGATACACGAGGCAACCTTGGCTTTGCCTTGTTGATTAGTCGTCACAATGGGACCTTTCACTGCAGGACCACATGGTTCCGGGCAACGTGACCTAAGATCTGGCAAAGGCTCCAGGCAGCACAAAGGAACGGAACTTCTCTTTGTGCTGTGAGTGCAGCATCGGTGTTTGGAGTTACTTACAATTGCTCCTTGGTTCAAAGCCCGAGCAACGATCTGAGCCACTCAGCTGTAGTTTTTCACCTCTCTCCTAGCAGTTCCTCAGTGGCCAGAGCTAAGCCAGGCTCCTGGGCAAAGGAGGAGATGGGGCCAGAGCAAAGTCCTGGGGAAACATACAATATGTGCCTATAAAGATATGTTACAGTGGTCAATAAACCATCCCTCTATACCATACCTTGGTAATTATTTTAACTTCTTTTGTAAACTCGTAAATTTTCAGAAATTGTTGAATTAAGCAGAGTCTGAAAGTGGA TCONS_00235226 TCONS_00235229 TCONS_00235230 TCONS_00235231 TCONS_00235232 r 3' 46319 TCONS_00235238 r 5' 11961 EMBV3_15102 GATTCATTACTGCCTGAGCCACCAGGGAAGCCATTTATGGAGCCTCTTACTCAGGAACTC Gene BVV0102_191201 + 0 NULL GK000018.2:33746497-33990420 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34177 GGACCGGCAGAAAACAAGTTCCAAGAAGGCAGGGACTTTGTGTCTCTTGCTCAGGACCTA Gene BVV0101_034019 + 0 NULL GK000030.2:131577562-131656605 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245740 TCONS_00245739 1 XLOC_150819 Coding TCONS_00245739 XLOC_150819 Coding Coding GPR64 X:131587757-131718604 j TSS184411 4772 1 TCONS_00245739_7 904 0.077116512992456 28 0.963743637558657 2.06511195019622e-27 1.7846267132692e-11 8.09660506402882e-13 1.75496753059594e-12 7.43298877654188e-20 2.82640998451036e-15 1.98906002091251e-64 2.35528393763239e-27 1.11096484410344e-13 6.51807806843141e-30 2.45439607746742e-34 5.41873819118191e-14 9.26315990052821e-06 3.23096181893992e-05 6.25296662956694e-05 0.00013202356410782 9.80173581281483e-09 0.000321342921679336 4.54277569774057e-18 5.37581586982119e-14 1.44388179082503e-14 7.33768944967368e-05 7.30979971494319e-15 7.77461695367955e-05 2.38585609839422e-05 1.58877907935045e-05 2.64964439288257e-05 1.55637706786639e-18 1.48431616480054e-05 2.7122604850762e-16 XM_002700376.3 GPR64 PREDICTED: Bos taurus G protein-coupled receptor 64 (GPR64), 0.0 8399 98.03 0.999790444258173 NM_001079858.2 GPR64 Homo sapiens G protein-coupled receptor 64 (GPR64), transcript 0.0 4967 83.64 0.950963956412406 TCONS_00245739_7 sp|Q8IZP9|GPR64_HUMAN GPR64_HUMAN G-protein coupled receptor 64; 0.0 1451 84.65 0.978982300884956 2 coding 0 0 0 0 0.0130827254455175 0.904762580565456 0.0117449522361825 0.822945738824667 GGGCTGGAGAGCGCCAGCTGCGAGGCCGTCGGCGGGGACCGGCAGAAAACAAGTTCCAAGAAGGCAGGGACTTTGTGTCTCTTGCTCAGGACCTAGAACAGTGGACATAGTAGATGCTCAGAATTTTTAGGACTTCAAGCCCTGGAGACAGCATCTCAAGTAACCTTAAGGGAACTGCTCTGAGGAGCCGAGGTGGAGAGGCTGGTTATATAGAAGTTTTGCAACAAAGGGCAGGATGTTTTTCTCTGGTGGGCAGTGTGGCCATGTTGGCAGACCTGAAGAACTTTTACTGATGTTTAAGATAGCCCTTGTCGTCATTTTTCTTCATATTACTCTGGTTACATCCCTGGAAGCTGAATCATCTCTCGTTGATTTTGTCCCCTACTCCAATGGTACTCCAGAGGTTGAAACTACAAGCCTAAATGATGCTACTTCAAGCGTGTTATCTACTTTGAACAAAACAGAAAAAACTAAAATCACTATAGTAAAAACCTTCAATGCATCAGGTGTCAAACCCCAGAGAAATATCTGCAATTTGTCATCTATTTGCAATAACTCAGAATCAAGTTATGGCTAATGGCACGGTAACTGGAATCCTGTCTCTAAGGGAATTGAACAGACAATCAGAACTCAACAAAACTCTGGAAACCTTAAGTGAGACTTATTTTACAGAGTGTGATGCAGCAGAGTCCCAAAGCACAGTAAATTGTACATTCACCATAAAATTGAATAAGACAATGAACATATGTGCTGTGATGGTTGCTTTCCAAACAGTAAAGATTCGACCCATGGAACAGTGCTGCTGTTCTGCCAGGACCCCCTGCCCTTCCTCCCTGGAGGAGGTAAAGAAACTGCAGTGTGACCTGCAGGATCCCGTTGAGTGTCTCGCTCGTCATCCACACGGCCCACCATTCTCTTCTTCCAGCAATGCCATCCCAGTTGCTCCTCCGGCCACCATTGTGTCCCAGATCTCTAGTGCCTTCTCTTTTGCTGAGCCTCTAGCTCATCCAGTTGTAACCCAGAGCCCTCACTCTCCAACAGGGGTGATTCCACTACCTTCTCCCCAGCCTTCAGCTCCCATAACTTCCAGCCCAGCCATTGATATGCCCCTGCCATCTGGAACTGTCTCTTCCCCTAAGCCTCCACCTGATCTTCCCCTCACCCTGTCCCCTGGGAAGTCGTCAGCCCCCTCTCCAACCACGTCTGCCCCTGTGAACGTCAACACGACCGGCATACCTCCTGACAAGACAGAAATTGTTCATACCAGCAGCATCAGTGTTTCTGATCTTGAGAACCAAGTGTCCCGGATGGAGCGGGCTCTGTCCTTAGGCAGCTTGGAGCCTAAACTCGCAGGACAAATGATAAACCAAGTCAGCCGACTCCTTCATTCTCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTGGCTTACAGCTGAATTTTTCAACCAAGACAATAAGTCTGACCTCCCCTTCTTTGGCTCTGGCTGTGATTAGAGTAAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCTGCGAATCTTCAGGTTTCTCTGGAAGCTCAGGCTCCTGAGAACAGTATTGGCGTTATTACTTTGCCTTCATCGTTGATGCGTCATTTACCAGCTGATGCTGTGGAGCTGGCTTCCAGGGTGCAGTTCAACTTTTTTGAAACTCCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTCTGATCAGCTATGTCATTTCCTCAAGCGTTGCGAACCTGACAGTCAAGAACTTGACAAGAAACGTGACGGTTACCTTAAAGCATATCGACCCGAGCCAGGATGACTTAACAGTGAGATGTGTATTTTGGGACTTGGGCAGAAATGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTGTCAAAGACAGGAGGCTGAATGAGACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCGTTCTGCTGGACTTGTCTCGAACATCCTTGCCACCAGCTCAGATGATGGCCCTAACATTTATTACCTATATTGGTTGTGGGCTTTCATCAATTTTTCTGTCAGTTACTCTTGTAACCTACATAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGCGCAGCCCTGCTCCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAAGAGGCCTCTGCATCTCAGTGGCTGTATTTCTGCATTATTTTCTCTTGGTCTCATTCACATGGATGGGCTTAGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACATCCGAAAATACATCCTTAAATTCTGCATTTTTGGTTGGGGCATCCCAGCTGTGGTTGTGGCCATCGTCCTGATTATATCTCCAGATAACTATGGGCTTGGATCCTATGGGAAATTCCCCAACGGGTCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATCACGGTTGTGGGGTATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTCAGCTCTGTCGAATTAAAAGGAAGAAGCAACTGGGAGCCCAAAGAAAAACTAGTATTCAAGACCTCAGGAGCGTCGCTGGCCTTACATTTTTACTAGGAATTACTTGGGGCTTTGCCTTCTTCGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTCAATACCTTACAAGGATTTTTCATATTCGTCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGGAGACGATATCTGTGTTGTGGAAAGTTACGACTGGCGGAAAATTCTGACTGGAGTAAGACTGCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGGGTCTCCAGCTCTTCAAATTCCTTACAGTCAAACAGTAACTCCACCCACTCCACCACGCTGCTAGTGAATAATGATTGCTCAGGACTTGCCAGCGGGAACGGGAATGCTTCTACAGAGAAGAATGGTGTTTCTTTCAGTGTTCAGAATGGAGATGTGTGCCTCCATGATTTCACTGGAAAACAGCATATATTTAATGAGAAAGAAGATTCCTGCAGTGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGCTTACACTTTATTGAGCAAATGTGATTCCTTTTCCTAAAATCAAAGCATGTTGCTTGACAGTGTGAAAATGTCCAATCTTACCTTTTACACAATGTGAGTTGTATAAAATCAACTAATTTTATACTCAGCAACTTTGGGATGAACATAAGCTAACTGAGGGCAATGGTTGCTATTGGAAGAGGAAACCAAGACATAATACCATGGTTCTAAGACATTTGCAATTTGGTTTCTTATCCTTCATTTTAAAAGAAGATTGGTTTTAAACAACACACTAAGAATAAGACTCATTTAAAACAAAATCAAAGCAGTTCATTTGCAGCCTCTTTTAAAGAGGCTAATATATCTTTGATAACATCATAGAAAGCCACTGTTGACTTGATCCTGTTGGTGAGTTCGTTGTGCATGCCTTTGTTGTAAATAAGCTAAACTCTAGTGATCCACATGTCAAAAATCTTCTGCATTTTTGGTATTTATTTTCTACTGTGTAAATTTCTTTCTTTGTAGAATCATGGTTGTGTTGTTGCGTCTAATGTGATAATTCAGAAAATCGTTGCTGGTTCAGTGAACTCTAAACCTCCTTTTGGAGATTATATGGGATGTGAAATACAGGACCCTCACTGAAATCAAGAAATAATGACGCCAGCCAGACTGGAAAAATGTAAGCAGACAGTGCCACAATTAGCTCATACAGTGCCTTGGAGTGAGTTAGAAAAAGGTGCTCCCACTGGGCAGACACAGTGTCATGGGCTCATGATTTGGCAGAGTGGAGGCCATATTTTAGCCTCATTCACTCTCTTGGGTACACCATTGTTCAGGGTACCAGCTGTACAACCATACGTAGCATCCAATACCGACACCCATCTCCTGACCTCATTCCTAATCATCAGATTATGGAAGCTGCACCAGGATGTTTAGCTTAACACCTTGGTGACAGAGAGGGATGGAAGTGTGATCTGGACCGTATGGCAGGAAGATCGTGAATGTGCAGGAGATACATACACTGCCACTTCTCAAATCCCCAGAGTCTTTCAGAAAAGGGGAGTAGAGCAGGATTACTTTTTAAAAGAGATGTACATCAAAAGAATCATATTGCTGTTCTTTAAAAGGCAACTGCATGGTACTTTGTTGATTGTTATGCCTGGTACACTCTAGCCCAGCCAGAGCTATAATTATTTTTTAAAATACTTGTCTTGATGAATGTATAGTGACAAGGGGGAGCAGCTATTGGGAACAGTGAACTATCCTGCAATGCTATTGTTTCCATATATATCGAACCCTTATTGCTCCTAGTCACAGCGAGTCTGTCTTGCTTCCTACCTACAACTTCTTGAGCAGTGCTTCGTGTCCTTATTAGGAACATTTTGAAACCCTTTAGTTAGGTCTTTCACTAAGGTTCCCTTTCATATATATTTCAAGTGAATGCTGTATCCCAGACTAACCGTAGTCATAATGTAATACACTTCTGTGAGTGCTGATTAGTCTTTGCGCTATTTCTTTTCCAATTTGTTTAATTGTCTTGTATTTATATGTTAAAATCGACAAAAATGTTAAAAATCGCCAAAATAAATTTGCAGTTAAGTCCTT EMBV3_13479 GCTGAGCTCCGCAGATACATCAACATGCTGACCAGGCCTAGGTATGGGAAAAGAGACAAA Gene GeneID:280900|PPY:NM_173952:170_cdna Constitutive 0 NULL GeneID:280900 19 GENE PPY NULL pancreatic polypeptide EMBV3_00689 GAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCACATTCCCCTACCATGGCTC Gene BVV0102_031466 + 1 EMBV3_17720 GK000020.2:48012749-48874611 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00063808 TCONS_00162571 TCONS_00054133 TCONS_00162568 TCONS_00142473 TCONS_00010832 TCONS_00218950 TCONS_00231771 TCONS_00217533 TCONS_00063805 TCONS_00230831 TCONS_00186556 TCONS_00117596 TCONS_00240372 TCONS_00210949 TCONS_00167122 TCONS_00231774 TCONS_00255144 TCONS_00186493 TCONS_00063807 TCONS_00186490 TCONS_00158397 TCONS_00131539 TCONS_00098199 TCONS_00240374 TCONS_00149043 TCONS_00131535 TCONS_00033204 TCONS_00149042 TCONS_00232767 TCONS_00222116 TCONS_00231768 TCONS_00186557 TCONS_00217532 TCONS_00158314 TCONS_00186834 TCONS_00230833 TCONS_00071397 TCONS_00011614 TCONS_00131537 TCONS_00230828 TCONS_00178734 42 XLOC_090915 XLOC_038534 XLOC_099452 XLOC_031942 XLOC_099449 XLOC_086898 XLOC_006383 XLOC_132269 XLOC_141259 XLOC_131531 XLOC_038531 XLOC_140321 XLOC_112608 XLOC_071762 XLOC_147036 XLOC_129459 XLOC_101958 XLOC_141262 XLOC_158076 XLOC_112545 XLOC_038533 XLOC_112542 XLOC_096851 XLOC_080244 XLOC_058445 XLOC_147038 XLOC_090920 XLOC_080240 XLOC_019438 XLOC_090919 XLOC_142251 XLOC_135425 XLOC_141256 XLOC_112609 XLOC_096768 XLOC_112885 XLOC_140323 XLOC_043168 XLOC_007165 XLOC_080242 XLOC_140318 XLOC_108507 NonCoding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_29958 GGAGTGGGCTTGTCAGAATTCTAATTAAGATCCTTGTTCTGCCTTTGTACAGGCCATATC Gene BVT0102_183772 + 1 EMBV3_41599 GK000015.2:63020364-63034392 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31350 TGCTGGCCCAGTACATATTCACCTTGAAGAGAAAGACAGGCCGGAAGACCAAGATCATCG Gene GeneID:534181|NT5C3:XM_002688366:198_cdna Constitutive 0 NULL GeneID:534181 6 GENE NT5C3 NULL 5'-nucleotidase, cytosolic III EMBV3_36430 TCATAAGCTTTATGTCATGTATTCTACTTCTGTGGAAAAGAATCAGTATTCTTGCATCTG Gene GeneID:534027|SPG20:NM_001077996:148_cdna Constitutive 0 NULL GeneID:534027 12 GENE SPG20 MGC152174 spastic paraplegia 20 (Troyer syndrome) EMBV3_00804 GTCCTTGAGAAGGCAAGCGCAAGCCCATTGATTCATCAGGCTTTTGCCAGCTGTTTTTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02847 GACTGCCTCCAGCAGAGAGTGTCCTCAGCCCTTATTCCCATTCACTTGAAACATGAGCTA Gene BVV0102_351332 + 0 NULL GK000013.2:22814294-22899922 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042248 1 XLOC_025625 Coding TCONS_00042248 XLOC_025625 Coding Coding - 13:22829111-22832847 - TSS31497 3572 5 TCONS_00042248_2 104 0.592945128779395 2 0.0441767068273092 1.30872863613632e-06 0 2.59070805793598e-06 0 0 0 3.2982164883124e-07 0 0 1.02926509321746e-05 3.66646298581565e-06 4.9034187014995e-06 7.00611991121956e-07 3.21516946276086e-06 1.17680292776008e-06 0.00290535916493865 0.000174519407517599 0.00044791246272453 0 0 0 6.28916039437449e-05 0.000879882214612853 0.000803359044566254 1.76333024155966e-07 2.1367783821398e-06 0 5.13734704145334e-05 2.93251755480443e-05 0.000197260961646165 XM_003583446.2 LOC100848419 PREDICTED: Bos taurus uncharacterized LOC100848419 (LOC100848419), 6e-169 600 82.24 0.165733482642777 TCONS_00042248_2 sp|P10400|POL1_MOUSE POL1_MOUSE Retrovirus-related Pol polyprotein; 5e-06 42.7 30.59 0.798076923076923 0 noncoding 0 0 0 0 -0.122998707830678 0.431055384650827 0.0268550452749027 0.625044061154935 TGCTCCATGAAATCATTCCAAGATTTGGTCAGCCCAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGCATTGGGCATTACTTATTATCTCCACTGTGCCTAGAGGCCTCAATCTTCAGGAAAAGTAGAAAGAGCCAACCAGTTCTTAAAGTCAGCGATAAAGATAACCCAGGAGACCTCCTTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGTATTGCCCCTAAGGAACAGGTTGGTCTTAGTCCTTATGAGATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTTTATCATGGCCATTGGACAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAGGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTTCAGCCCACATGGAAGGGCTCCTACCCTGTAATACTTTCTACCCCAGCAGTAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCTCTGGGAGATCTCAGATACCTATTCAGGACTACAAGTGAGTGCCATTCTAATGAACACCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGGATAGCTCTAAAGAACAAACACAGCTTGACAGAGATTGTACTCCAAAACAAACAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCGACATGAATTTAGAATCGGCTAATGCCCCTACTAGTCCTTGTTATGCCATATTGATGCTGCTTATGATTGCTCCATGTATCATCAATTGTCTAACCTGTTTTGTCTCTGACCAGGTCAACAAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTACAGCCGACCACAGAAAATATCACTCACCCTTAAGTGGACACCGCTATAAGGACTCTGAGGCTTGCAACTAGCAAGAGAGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGGAAGTAGCCAAAAAGACCTCGATGCCCCTATTCCCAAAGAACTGGGCCTCCCATCTCTTGAGGGGGGAATGTTAGGTAGTTAGAATAGGGAAAAGAAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGAGGAAAGCCCACAAAAATTGAACAGAGGAAGGTCAAAGGGAGGTCCGAGGACCACAGTGAGGACTTCAGGTAGAACAGCACTCCTGACTAAGCCCAATTTGCATAGGGCAGGCCCAGGGGGAAGAAAAAAAAACATAAAAAGAGGAGCCAAAGTGCTTTCTCTCTCTTTCTCTCCCTTCCCCGAGCACTGGCGTGCTCCTCCACTCTCTTCTCTTCGCATCCTTGGGTTGGCATGCCCTCATGCTTGGAGGATGGATTCTCCTGCTATCTTCTAACTAAAATAGAGCTGTAACACTGATTTGTCTAAGAGCTATAACATGGTTTGTCCAAGACCCAAGAGCTGTGACGCACCGAGGGCTTTAATGTCCGTCGCTCCAAATCTTTGTTGTGATAAGCCAGAACCTAGGAGCATACACTCGCCTGACAATAAGATAATAACAACAGCAGTTGAACACTTACTATGTTCTAGCATGCGTGCATGTTCAGTCGATTCAGTCATGTCTTTGTGACCCCATAGACTGTAGCCCGCCAGGCTCCTCTGTCCACAGGATTCTCCAGGCAAGGATACTGGAGTGGGTTGCCACACCCTCCTCCAGGGGCTCTTCCTGACCCAGGGATCAAACCTGTGTCTTCTGCATTGCAGGCAGTTTCTTAATGGCTGAGCCACTGGGGAAGCCCACTATATTCTAGGCATTCCTAAGTACTTTCATGTGTCATATCCCATTTAATCCCATTTTTATTCTATTTCCGGATTCTACATTTGAAGAAACTGTTCCCAGTCTTGCATTTGGAAGCTTGGACATTGACTGGGGTTGGAGGTATATCTCCTTTACTCTGTGTCTTCGCTGAGGTGGTCCCATAGGGATACAGCTGGGAGCAGAGGTGAGAGCTGGAAAGACACAGATGAGACAAAAAGGGTGTCTCCATCAGTGCCGGAATGCATCCTGGGACAGCACCGGGCCATCTCCAAGGGCTTTCAGGCAGCGTGTGTCCACCGTGTGGGGGTCCGGAGAAGAAGCATTTGCTGGACCTGAGTCCCAGAAGAGGCCTGGGCCATTGCACCGCACCCCTGCCCCCGCAGGAGCAGAGAGCGGACTGGAGCATGCCGACTGCCTCCAGCAGAGAGTGTCCTCAGCCCTTATTCCCATTCACTTGAAACATGAGCTATGTGTGTTCTTAAGAGATGTAAGCAGAAATTAAGCCAAACGATGCTTCCTTTTTGGCCTGTGTCTCTTCTCAAATAATCCCAAACCTTTAAGAAAAGCAGTATGGTTAAAATCACTAAAACTCAACAAAAGAAAATCCTGAGCTTGGTTTTCGACCTTTGGAGTTGGAAGTGCCTTTAAACACCTAAGGATGGGGATCTGAGCCTTTCGCTGAGCCCAAGGAGATGAGGAGATGGGAGTCCTCTCCCCTGAAGATCCAGGATGAATGCCATCCCCAGGGAAGAGGAAAAGGTCTCACACTCTCTAGATGCCACCTGAGAATTCTGAGTCACAAGCCACCATCTAATGAAATCAGGTCGGCAGGTGGCTTGCAGGGGATTGGCAGCCTAGCTGTTGCTCTGCAGCCCCATCTCCCCCAGACCTGCTTTTGGGGGCCAGGAGGAAGGAGGAGCCATCTCTGCAAAGTGGATCCTGGCGACAGACCGTTCAACAGGACCCAGAAGACAGGGCATGTCCAGGTCTAAGACCACCCACCGCTGGATGCAGAGAAGCAGGAACTTGTAGGCTTGCACAGGAAACAGCAAAAGGCTAAATTCAGCAAAATTCCCTGAAATGCAGGGAATTTGTAACCCACTCAGAAGGTACTATAGCACGTTAATTAAGAGCGTGGATTTTAGTCAGCCAGACCTGGATGTGACTCCCACGCAAATCTACAACGGACTAACTTGAAGACCTTGGACAAAAAAAAAATCTCTGAACCTCAGTGATCTCATCTGGGGGAGTATATTGAAATACAGATTTAAGAATTACCAGTTGGGGGAAATAGTATTTAAGGTCGGAAGTTGTGTTTGGAAGATTGTATATGAGTATTTTTATATTTAAAAAGTTTAAAGGCAAAAAAAAAGATAAAATCAATATAAGAAATGTCTGTGTCTGTTAAGTTGCTTTCAGCTTCAAATAATGAAGACTCCTAAATCAATGGCTTAACCAAGAAGCAGATTTTTTTTTTTTAATCTCACGTGACCGGGAATTCAAACTCTGAGCAACCTGTAAGTCCCGCCCATCAGGGCCCTGATTCAGCTTCTCTGTGTTGGCTTCCTCTTCAGGCTAGTAGCACCGTGGCTGCTGCAGTTCCAAA TCONS_00044785 r 3' 67076 TCONS_00044785 r 3' 70811 EMBV3_02306 CTCCTGGGAAGCGAACAGAATCACCTGATGGGACCTGCAAAGTGTATCTGGGCAATAATG Gene GeneID:504871|CDV3:XM_002685093:55_cdna UTR3_Alt 2 NULL GeneID:504871 1 GENE CDV3 NULL CDV3 homolog (mouse) EMBV3_14796 TTCATTGAAGGAAGCAGACGTTCACCACTCTATACCCTCTGGTTCTGTGTGGGGCAGTCA Gene GeneID:516979|IRF3:NM_001029845:241_cdna Constitutive 0 NULL GeneID:516979 18 GENE IRF3 NULL interferon regulatory factor 3 EMBV3_26612 CTGCTCCGGGGAAGCTGGGTTTGTTTCCTAAGAAGAGGGGCTACCTTTCTAGCCCTGTAT Gene GeneID:506148|FAM109B:NM_001045936:138_cdna Constitutive 0 NULL GeneID:506148 5 GENE FAM109B MGC137991 family with sequence similarity 109, member B EMBV3_39877 GATACATTAAGCAATTACCAAACTTAAAGTGACGAGATTCAATGTCTGTCTACATTTGGC Gene BVT0101_041018 + 0 NULL GK000021.2:70233403-70269909 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16731 TCCTGACATTCACTGTAAAACATTCAGGGTCCTACCATTTCTGTTCAGGAAATCTTGTAG Gene BVT0102_089617 + 0 NULL GK000005.2:60891360-60897862 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195288 TCONS_00195292 TCONS_00195293 TCONS_00195291 TCONS_00195294 TCONS_00195289 TCONS_00195290 1 XLOC_118013 Coding TCONS_00195291 XLOC_118013 Coding Coding CDK17 5:60895923-61007579 j TSS145563 4122 1 TCONS_00195291_3 523 18 0.963243921006672 0.0174987295054191 0.0120134122982149 0.0113076001260106 0.00937214742212438 0.00383725224434273 0.00541199608314711 0.0039272654855114 0.00505753436898554 0.00395769704445298 8.16601854344012e-09 1.62726833252072e-05 0.000434907284612469 0.000402755396871853 0.00129791722543453 0.00228145030859255 0.000773644784181669 2.10396880127067e-09 4.73377506718674e-20 0.00493802614308029 0.00731082950283143 0.00369143100492053 1.7819570040442e-10 4.59222967485367e-08 9.75776517581239e-05 0.00272464505829727 0.000934088913087475 0.00516548396100829 2.92892501240276e-12 8.94007974187587e-05 8.77158929201842e-13 XM_588580.7 CDK17 PREDICTED: Bos taurus cyclin-dependent kinase 17 (CDK17), 0.0 6524 100.00 0.877244056283358 NM_002595.4 CDK17 Homo sapiens cyclin-dependent kinase 17 (CDK17), transcript variant 0.0 5405 89.66 0.981562348374575 TCONS_00195291_3 sp|Q00537|CDK17_HUMAN CDK17_HUMAN Cyclin-dependent kinase 17; 0.0 1073 99.04 0.998087954110899 3 coding 1 1 1 0 1.86295312376157 0.0245248025762476 -1.09164171453864 4.38848305179807e-05 GGGGCTGAACCAGTGAGATTTCTTCTCCAGTCGCCGTGGACAGGCGGAGGCGTCAACCCGCAGCCGCCGAGTGAGAAAGCGACGCACACGCAGCGGCGAGCGTCTCGTCGGCTCGGCACCGTCCGGCGGCCCCAGAGAAGAAGAACCCGTGTCCGGCCCGGCCGCCTCAGCCGGGCGTCGGCGCCTCCCTGCCCGCCTCGCTCCCACCCCGGCTCCTCCAAGGGGATTAGTGGGCCGCCTGCGCGACTCGGCGGCCCGGGAGCCATGTTGTCCGGGGGGCTTGGCAACGCGTGAGCGACCCGCAGCCCCTCCCGGAGGCTCGGACTCTTCGGCGAGAGCTGGAAGGCGGCTGCGGCGGCGGAGGCCTGCGCGTCGGAGGCGCCTCGGGTCGGCCAGCGGCTGGGACCCGGACCTGCATCCGGTCGCCGCGGGCGTCGGCGGAGCCGCTTTGCCTCTGCGCCTCCCTCGCCTCGCCTGCTCTCGGGACGCAGCCCCCGCACTTGCTGGATTTTTCAAGTCACATTCAGTTGATAGGATGAAAAAATTTAAGAGAAGGCTATCCCTCACGCTTCGAGGAAGCCAGACTATTGATGAATCGTTATCTGAATTGGCTGAGCAAATGACTATTGAAGAAAACAGCAGCAAAGATAATGAGCCTATCGTGAAGAATGGCAGGCCTCCGACCTCGCACAGTATGCATTCCTTCCTCCACCAGTACACAGGGTCCTTTAAGAAGCCCCCATTGCGGAGACCACATAGCGTTATTGGAGGAAGCCTTGGTTCCTTCATGGCAATGCCCAGAAATGGAAGCAGATTAGATATTGTTCATGAAAATCTAAAAATGGGATCAGATGGCGAGAGTGACCAAGCTTCTGGGACATCATCTGATGAAGTCCAGTCACCTACGGGTGTTTGTCTTAGAAATCGTATACATAGGCGGATCTCAATAGAGGATTTAAATAAGCGGTTATCACTGCCTGCAGATATCAGAATACCTGATGGGTATCTTGAAAAGTTGCAGATAAACAGTCCACCATTTGATCAACCAATGAGCCGAAGGTCTCGGAGAGCTTCCTTATCAGAAATTGGGTTTGGAAAAATGGAAACCTACATCAAATTGGAAAAGCTTGGAGAGGGTACCTATGCAACAGTTTATAAAGGAAGAAGTAAATTGACAGAGAATTTGGTGGCCTTGAAAGAGATCCGGTTGGAACATGAAGAAGGTGCACCCTGCACAGCAATAAGAGAAGTTTCACTATTAAAGGATCTAAAACATGCAAATATAGTAACATTACATGACATTGTTCATACAGATAAATCTTTGACTCTGGTCTTTGAGTATCTGGATAAAGATCTAAAACAGTACATGGATGACTGTGGAAACATCATGAGTATGCACAACGTAAAGCTGTTTTTATACCAAATTCTACGTGGTTTGGCATATTGCCACAGAAGAAAGGTGTTACACCGAGATTTAAAACCACAGAACCTCCTCATTAATGAAAAAGGAGAATTAAAGCTAGCAGATTTTGGACTAGCCAGAGCCAAGTCAGTTCCCACAAAGACCTACTCAAATGAAGTTGTCACACTTTGGTACCGGCCGCCTGATGTGCTTCTGGGTTCCTCAGAGTACTCAACACAGATTGACATGTGGGGTGTTGGTTGCATTTTCTTTGAAATGGCTTCTGGAAGACCTCTGTTTCCAGGATCAACTGTGGAAGATGAACTGCACTTAATTTTCCGACTGCTAGGAACTCCATCTCAGGAAAATTGGCCCGGTGTTTCTTCAAATGATGAGTTCAAGAACTACAACTTTCCAAAATATAAACCACAGCCTCTAATTAACCACGCACCCAGGTTAGACTCTGAAGGAATTGAGTTGATAACAAAATTTCTTCAGTATGAATCTAAGAAAAGGGTTTCAGCAGAAGAGGCCATGAAACATGTGTACTTTCGAAGTCTGGGACCGAGAATACATGCTTTACCTGAAAGTGTATCAATATTCAGTTTGAAAGAGATTCAGTTGCAAAAGGACCCCGGTTTTCGAAATTCTTCTTATCCAGAGACAGGACATGCGAAGAACAGAAGACAGAGCATGCTCTTTTAAGTCTGATAACATGGTTTCAAGCCCAGCCCCCAGCCTTTCTTATCAATCAAGGACTCATATCTGAAGGCAATTATTTCTTTTGGTGGACTTGGAATCTTCGTTTGTCTACACTGTCCTCTTCACAGTGGAGTCTTTTTATTTCAGACCTACAAATTGTTTTTATATTTGTTGTCACAGTGTGACAATTTTTTTGTACAGTTGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCTGTTGATGGTAACTATAGCTGCAATTTTTGTGCAGGACTGAGAAACACAGTGCATTATTTATTGCGGAATCATTGCTGCTAAATAACTACTGTCTGTTTATTTAACACAACAGTTGATGCCTGAAGAAGTTGCAGTGGCTTTATTATATGTGAATGCATCTGTTTCTCCTCATAAATTGTTTTACTGCTGCATTTTTTGTTTGTTTTTAAAATTAAACTGCATTGTTTCCTGGAATGTAAATTTAGCTTTGCTTAACAGTAAAATAAGTGAGCCAACTTGAACACTCTTACGTTCATGCTATATAATTTTTTATTGAACATTGGCAAATAGAGTAGCTAAGAAATCAATAAGCACATTATGTTTAGGAAAGCATGTGATGCAGAAGTTGATTCGAGCAAGTGAATACCTGCCACTTTGGGGATCTTGAATTACATACCAGTAAATTAAAGTACCACAATTATTTATTTTTACCTTTCCTCATTTTAGAAATATTTACTGCATATTATTGGATATTTGTATACTAATACACTTAACCTGTTTTACATTGTGCTTTAATTTAGTTAAACCATACAAGTCCAGTCAAACATGAGAGATCTTGTTTTGTTTATTTGTCTTAAATACAATTCTTTTAAAAATTAGAATGGATGATTCTTCATTGGGGAACAATTTATTTCATTTGAGAGATGTGTATATGTGTGTGTTTTAATAGCATTCACTTGGAATCAGCTGAAAGATGTAATATGTGTTTGAAATGAGCCATGATAAATAACAAACGAGAGAAATGAGAACTTGGAAGATTGTTTTAAAGCATTCTAGGTATTATCTGTTTACCAGAGATAGTAAATATTACAGTTTTAATTATGCATCTTTTTGAATATCATAAATACACCTTGATGTTGGTAACAGTGTTTTAAGCATTTGTGTTCACTTTTAAGGACTATTTGTTTAGTGCATCTTACCAACTGCAAATCTTAATTGCTATATTTTGAAATGGTCATGTAAATTTGGGGCTTATGTATCATGAAAAGAGTCATAACTTAATTCATTTTCCTGACATTCACTGTAAAACATTCAGGGTCCTACCATTTCTGTTCAGGAAATCTTGTAGTTTATTGTTATTTAACAGTATTAAGTGAATTTTTGTATGTTTCATTTTAACTTTATTTGTGAATAGTGATTGTGGCATGTTTGGGGTATTATTTTAATATTTCATGATACTGAAGTTTTAATTTTTAAAAAAATTTCTGGAAGAAACAGATTCATGTGTAATGGTGAATATTGGACCACTACTGCTTTTCACATTTGTAAATTGGTTTTATGTTAAACTCTGTAGCCTAACAAACTGCTGTTATTTCTAACTGACAGACATGTATTAATATTGTACTTTGAAGGTTATAAATATTATGTGAAAATTCCTCCATTTTGTTTCAAAATTTATAATAACAAAATCTTCATGTTGTTAAAATGTGGTTTTGTTGAGTCACGGTTCTTTCTTGGGGAAGAAGGCTGTGCAGAATGGGACCATTTTCTTTTATGTGTCTCAAGATAAAAAAGTGTCTCTGTGCCAGTAGCAATTAATTTATAATTGTGCTGGCCATTCATTTACTAATCTTTACTGTAGTTTTATAGGATAGCACTTTTAATTGTCATATTTTTCATTTCATAGGTTATCTATTTGATTTGTTGAAAATTTGACAGTTATCCTTATGTTTCATTCTTGCATATAAAAGGTGAAGAATTGTATCCAAGTTATATAAAATTGCTCTTCCTA EMBV3_05423 TCCCCTGAGCTCTGCCCTCGGATGTTCCACCGCCCCTCCTCCCTCGGGACCTGTTGTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11410 CAGGTACAGAGGAAGTACAAACGAAGGTGCTAAATCTGTGATCATCACCATCTTGCTGTG Gene GeneID:532236|INA:NM_001075958:174_cdna Constitutive 2 NULL GeneID:532236 26 GENE INA MGC142838 internexin neuronal intermediate filament protein, alpha EMBV3_24537 AAACTGGAACGGTGAAGGTGACAGCAGTCGGTTGGATCGAGCATTCCCAAAGTTCTACAG Gene GeneID:280979|ACTB:NM_173979:32_cdna Constitutive 0 NULL GeneID:280979 25 GENE ACTB MGC128179 actin, beta EMBV3_08176 ACTCCTACGAGAAGCAAAGGAGAGATGACCCCAAGTCGCTGCGCATTAAATCTAGGGCAG Gene BVV0102_388772 - 1 EMBV3_31793 GK000017.2:30231399-30287330 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076927 TCONS_00076929 TCONS_00076926 TCONS_00076928 1 XLOC_046940 Coding TCONS_00076926 XLOC_046940 Coding Coding HSPA4L 17:30202887-30285669 j TSS57635 4110 1 TCONS_00076926_3 793 20 0.95059252727075 0.00514265646996025 0.00171633086438536 0.00375081672417463 0.00291527770815076 0.00187099290683709 0.000985810456375364 0.0021809116384601 0.00175152102886734 0.00141108744311725 0.000234985803093649 0.000107861598771081 3.85708717203297e-15 7.92263116653917e-05 0.000190178908452206 0.000948849143647981 8.2295441208412e-08 8.66011423259001e-05 0.000132393134886037 0.0018768720842364 0.00200583453244588 0.00184115140750699 0.000138178306142261 0.000142267400684541 4.56097631474514e-05 0.00151344252228866 0.0020543607462366 0.00135192566260104 7.85692230269161e-05 5.01335891867067e-05 0.000130692970169411 XM_002707745.3 HSPA4L PREDICTED: Bos taurus heat shock 70kDa protein 4-like (HSPA4L), 0.0 4881 99.96 0.660097323600973 XM_005262838.1 HSPA4L PREDICTED: Homo sapiens heat shock 70kDa protein 4-like (HSPA4L), 0.0 4700 89.08 0.874452554744526 TCONS_00076926_3 sp|O95757|HS74L_HUMAN HS74L_HUMAN Heat shock 70 kDa protein 4L; 0.0 1569 95.17 0.991172761664565 2 coding 0 0 0 0 -0.0663139715751957 0.717741394170841 -0.0205496357597532 0.708655325376244 GCGGCGAAGGCTGCGGCGCGGGCGGCTTTCCCTTCCTCCAAGGTTCCCCGACGCGCTGCCCTAGATTTAATGCGCAGCGACTTGGGGTCATCTCTCCTTTGCTTCTCGTAGGAGTCGTAGTTCCAGGAGCAACAGCCCAGAAAAGGACGCGGTCCCCGCACCGAGGGCTTCTGCACCATCACCCCTACCTTTAGGCGGCGGGATGTCTGTGGTCGGCATTGACCTCGGCTTTCTCAACTGCTACATTGCAGTAGCGAGGAGTGGCGGCATCGAAACCATCGCCAATGAGTACAGCGACAGGTGTACGCCAGCGTGTATATCTTTGGGATCAAGAACACGAGCCATTGGAAATGCAGCTAAGAGCCAGATAGTCACGAATGTAAGAAATACAATTCACGGTTTCAAAAAACTTCATGGGCGATCTTTTGACGATCCTATTGTGCAAACTGAAAGGATCAGGCTTCCCTATGAGCTGCAGAAGATGCCGAATGGAAGTGCAGGGGTTAAGGTGCGATACCTAGAAGAAGAAAGACCTTTTGCAATTGAGCAGGTTACTGGGATGCTGTTGGCTAAGCTTAAAGAGACTTCAGAAAATGCTTTGAAGAAACCAGTGGCTGACTGTGTGATTTCAATTCCTAGCTTTTTCACTGATGCTGAGAGAAGATCTGTGATGGCTGCAGCCCAGGTTGCAGGTTTAAATTGTTTAAGGTTAATGAATGAAACTACTGCAGTTGCTCTAGCATATGGAATTTATAAACAGGATCTTCCTCCATTAGATGAGAAACCAAGAAATGTAATATTTATTGATATGGGACATTCTGCCTATCAGGTCTCAGTTTGTGCTTTTAACAAAGGAAAACTTAAAGTCTTGGCTACTACGTTTGATCCATATTTGGGTGGCAGGAACTTTGATGAGGTTTTAGTAGACTACTTCTGTGAAGAGTTCAAGACAAAATATAAGATAAATGTGAAAGAAAACTCTCGGGCCTTGTTGCGTTTATATCAGGAATGTGAAAAACTAAAGAAGCTAATGAGTGCAAATGCATCAGATCTTCCACTGAACATTGAGTGTTTCATGAATGACCTTGATGTTTCTAGTAAAATGAACAGGGCTCAGTTTGAACAATTATGTGCTTCCCTCTTAGCCAGAGTTGAACCACCATTAAAAGCAGTAATGGAACAAGCAAACTTACAACGTGAAGACATAAGTAGTATAGAAATTGTAGGGGGAGCAACACGAATTCCTGCTGTGAAAGAGCAAATCACTAAATTCTTTCTTAAAGACATAAGTACCACATTAAATGCTGATGAAGCTGTTGCAAGAGGATGTGCATTACAGTGTGCAATTCTCTCACCAGCATTTAAAGTGCGTGAATTTTCCATAACAGACATTGTTCCTTATTCAATCACATTAAGATGGAAGACCTCTTTTGAAGATGGAACTGGGGAATGCGAAGTATTCTGTAAGAACCATCCTGCCCCATTCTCAAAAGTCATTACTTTCCACAAGAAAGAACCATTTGAACTAGAAGCATTTTATACTAATTTACGTGAAGTGCCTTATCCGGATCCAAGAATTGGGAACTTTACTATTCAGAATGTTTTCCCACAATCTGATGGTGATAGTTCCAAAGTTAAGGTTAAAGTTCGTATTAATATCCATGGAATCTTCAGTGTGGCTAGTGCATCTGTAATTGAGAAGCAAAATATAGAAGGAGATCAGAGTGATGTTCCTATGGAGACAGAAACTTCTTTTAAGAATGAAAGCAAAGATGATGTGGATAAAATGCAGGTTGACCAAGAAGAAGGAGGTCATCAAAAATGTCATGCTGAACACACTCCAGAGGAAGAAATTGACCATACAGGAACCAAAACAAAGTCTGGTCTCTCAGAGAAACAAGAGCGACTGAACCAGAACATTAAAAAAGGGAAAGTCAAGAGTATTGATCTGCCTATCCAGAGTAGCCTGTGTAGGCAGCTGGGCCAAGATCTCCTCAACAGCTACATTGAAAATGAGGGGAAGATGATAATGCAGGATAAGTTAGAGAAAGAAAGAAATGATGCGAAGAATGCTGTTGAAGAATATGTATATGATTTTAGAGACAAGCTTGGCACTATCTATGAAAAATTCATCACTCAAGAAGACTTGAATAAACTATCTGCAATATTGGAGGACACAGAAAATTGGCTTTATGAAGAAGGAGAGGACCAACCTAAACAAGTATATATGGATAAGCTTCAAGAATTAAAGAAATATGGCCAGCCTATTCAAGTAAGGTACATGGAACATGAAGAAAGACCAAAAGCTTTAAACGACTTGGGAAAAAAGATCCAACTTGTCATGAAAGTGATAGAAGCATACAGAAACAAGGATGAAAGATACGATCATTTGGATCCTGCTGAAATTGAAAAGGTTGAAAAACATATCAGTGAAGCCATGAGTTGGCTGAACAGTAAGATGAATGCACAGAACAAACTAAGTCTCACTCAAGATCCTGTGGTGAAAGTTTCAGAAATAGTTGCAAAGTCAAAGGAACTCGATAATTTCTGTACCCCCATCATTATAAGCNCAANCCGAAAGTAGAGGTTGCTGAAGACAAGGCAAAAGATAATAGTGAACACAACGGACCAATGGATGGACAGAGTGGGGCTGAAACTAAACCAGATTCAACAAAAGACAACTCACAGCATACTAAGTCTTCTGGAGAGATGGAAGTGGACTAAGTCTTAACTTTACCTTCACGTAATTCCAATAGTGCAAGTAACCACAGAGTCCATTCTTCTTTTACATCTGGTACACACAACAGATGTTTAGTTGCTCTTAACCACCTTCTGTCATTTGTTTTTTGGAGTAGTTTTGAAAAGTGTTTTATACTGAGTGCACTTACAGTCATTTCCATTGCTGCTTATGTGAAGCTTTAGCTGAATATAGATTAACAAGTCAGTTTAAGCTTTCCTAATCTATTTTAGGTCAAACATGCAAGACTGATAAGTAGTTGGCAACAATCTACCTTACTTAAAGCTTCTACTTGGATAAACCTCAGCTCCTTTATTCAGGAAAGGATACTATATTGCACTATTGTTGCAGAAGCATAGATTTAATTGCATCATTATTTTTAAAAACATTGAAACTGATGTGGTTTAAAGCCACCAAGGCACTGACCTTTTTGTAGTTATTGTACTATTATAATTTAAACATTACAAATAGGTTCCTTGACAAACTAGTCCGTATCAGTGGTGTGCCATGAGAACTCCAAAACTTTATTATCACATAAATGAACTAAAACACACACTGAAGGGGAAAATGCACAATTTTATGTTAAGGTGACACCAGCAGTTTGCTTCTTTTCATTAGTCATGTGGATTGATGTTTCTCAGAGTAATTCAGTGTCTTTTGCACTTGAAACGTCTGATCTACTTGTCCTGAAGACCAGCTGCTGCTAAAGTAATGCTCGCCTAAAAACGATGAAGCATTTTTGATGAAAATACCTTCATGTTAAGGGGGAAATGCTGTTGACTTACTCAGACGTGCAACTGTGATGTTGATAGCCTTTGTTTTTAGTTTTAAATAGTTTTTGTTTTCTTAGTTCATTTTGTTAATGTTAACACAGGGTAGGGAGAAATGGCACAATGTGTATTGCATTATATACATTTATCAGTGATTTACTGTTAACATAAACACTATAAGCCGTAATACTTGAAAAGAAACACTTATACCACATAAGTCTTAGGAAATAATGCTTGTAATAAACTGTTACATATCAACAGGCAAATATAGAATGTTACATAGTGTAATATGATATGATGTGATTAAATTATAGTTCTTGCTGTTACATAACCTGTTCAGACCTTGGCTCCAGTTTTGGTGCTTCATATATTTATATGGGACGAGGGACTATGAAACTAAGATACTTTAAGTAGTCCAAGCTTCATCACCAGACTTGTTCACTGTTCAGTTCTGTCCAAAAGCTTGAAAATTTTCAGTATGGGAGGCAGACTGTTCAACCTTGAAGTAAGTAAATGTCCATATTCCAAGTTACTCTTTCTATCCTTCTGGAGCTGGTCTCCCAAAAGCCGAACTGCCAACACTTCCGGCCAAGACTGCAGGAC EMBV3_05009 GAGACTCACCAGGGAGAAATATGAGTGGGCAAGTGGCATCAACATTGGGACCTACAAAGC Gene GeneID:100297779|LOC100297779:XM_002700117:2_cdna Constitutive 0 NULL GeneID:100297779 X GENE LOC100297779 NULL similar to X antigen family, member 5 EMBV3_13076 TGTTTCACTGCCCAGAAACCATTCCCTCTCCTGGCAACTGTACCTTGACTTTCCTCTAGG Gene BVT0102_082304 + 0 NULL GK000010.2:81121591-81191935 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022571 1 XLOC_013241 NonCoding TCONS_00022571 XLOC_013241 NonCoding NonCoding - 10:81130020-81130387 - TSS16461 367 0.760217983651226 1 0 0 0 0 0 0 0 0 0 2.14989651867713e-05 2.2422337820505e-05 0.0009948909085294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.23442999317702e-05 1.32278187920381e-05 1.63821490790644e-05 NM_001034664.1 PDZD3 Bos taurus PDZ domain containing 3 (PDZD3), mRNA. 1e-19 100 80.17 0.307901907356948 NR_024565.1 ZNF271 Homo sapiens zinc finger protein 271 (ZNF271), transcript variant 3e-15 86.0 77.48 0.299727520435967 0 noncoding AAGACATCTTTATTGCTCTTACCACTTAGGAAATTTTGAGGGGTTTAGGAGCTCTGTGCCAAAAACAGGACAAAGAGCAAATATATATTTCTTATTATAAATCACAACATCACAGGGGAGACGTAGAGGGCAGTTACTCTTTTAAATGGGGTGTTTGGGGAAGGTTTCATTGAGTAGAGAATATTTAAGACCTAAATAACATGAAAAAGGAAAAGCATTTGAGGAACAGCCAGGAGGCTGGCATGGAACAATGCGTGTGAGACACATGAGGAAAAGTACAGGGCAAGTGTGGGCATAATAGATATTCATTGTTTCACTGCCCAGAAACCATTTCCTCTCCTGGCAACTGTACCTTGACTTTCCTCTA TCONS_00018076 TCONS_00018077 . 5' 8309 TCONS_00018076 TCONS_00018077 . 5' 8309 EMBV3_21963 ACCCCAATGAGCTCTATGTCAACCACAGAGGCAAAGATCATGCCAAGTTTTCACCTGTGG Variant GeneID:516337|POLR1C:NM_001038124:288_cdna 562^714 1 EMBV3_22592 GeneID:516337 23 GENE POLR1C MGC134521 polymerase (RNA) I polypeptide C, 30kDa EMBV3_16407 TGTCGACGAAAGTGAGAGACATCAGAAGTGACCAAGGACCCAAGGGTTTCCGACAGTCCG Gene GeneID:614841|FAM174B:NM_001076350:62_cdna Constitutive 0 NULL GeneID:614841 21 GENE FAM174B NULL membrane protein FAM174B EMBV3_16775 CCTCTTGGATATCTATAGTTTCTGGCTCAAAAGGGAGTTAAGCCACAGGCCAAGACAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29239 AAAAACTGTCAGATTGGACAGAAGCAACTGAGTCATGAAGAAGTACGACAAAAGCGGCAG Variant GeneID:616348|C10H11ORF46:NM_001078061:51_cdna 144^283 1 EMBV3_24697 GeneID:616348 10 GENE C10H11ORF46 NULL chromosome 11 open reading frame 46 ortholog EMBV3_36504 GAGTGGCTGCTGCTGGAGGATGGCAACGAGAGTCTGAATGGTGTCTGGCTGAACAGAGAA Variant GeneID:515933|RNF8:NM_001046216:35_cdna 197^325 1 EMBV3_37275 GeneID:515933 23 GENE RNF8 MGC137933 ring finger protein 8 EMBV3_32145 TGTCTCCTAGGGTCTGTTTACTGCTTTCGTTGGGTGTGTATGTGATGGGGTTTTCAGGGG Gene GeneID:507269|LOC507269:XM_002699194:65_cdna Constitutive 0 NULL GeneID:507269 29 GENE LOC507269 NULL similar to olfactory receptor 874 EMBV3_05624 CACTGTGATTGGCGCCCGAGTCCGCTGATGGAAGAACGTCCTTGGTCCAACAGTGTTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26298 ACTGAATACCAAGGAAACTTCTCGGCCTGGAGTGGTGTATCTAAGGGACTGGCCGAGAGT Gene GeneID:281862|IL2RG:NM_174359:44_cdna Constitutive 0 NULL GeneID:281862 X GENE IL2RG NULL interleukin 2 receptor, gamma (severe combined immunodeficiency) EMBV3_05297 CAGCTCACGGCAGCCCGGCTCAAGGCGCTCGGCGACGAGCTGCACCAGCGCACCATGTGG Gene GeneID:787139|HRK:XM_002694511:412_cdna Constitutive 0 NULL GeneID:787139 17 GENE HRK NULL harakiri, BCL2 interacting protein (contains only BH3 domain) EMBV3_36191 ACTTAATCCCCAAGTTCCTTATGGCAAATGGCCTAATGGGGCTGTTTGAAAAACGTCGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28844 CCGGCAGCTGGAGAATGAGCTGAAGATGGAGGAATACCTAAAACAGAAGCTACAGGACGA Gene GeneID:541153|DTNA:XM_002697679:174_cdna UTR3_Alt 2 NULL GeneID:541153 24 GENE DTNA NULL dystrobrevin, alpha EMBV3_43746 TCCATGGGAGCCCGAGCATCCACAACACAGCTCGCCGCCTGCAGCTCAGCCCGTGGGAGA Variant GeneID:506766|MAP7:NM_001101874:14_cdna 865^975 3 EMBV3_10364 GeneID:506766 9 GENE MAP7 MGC151537 microtubule-associated protein 7 EMBV3_36049 AATGGTAGGCTCAGAACTAAACTGTTAGGGTGGGTTTTTGCGTGGAGGACAGGGGTAGTC Gene GeneID:538486|ACTR2:NM_001102213:53_cdna Constitutive 0 NULL GeneID:538486 11 GENE ACTR2 MGC166374 ARP2 actin-related protein 2 homolog (yeast) EMBV3_43710 GCTTGACAATATGGCTTTGTGTTTTGTGTGTTTATGGTTGGGGGAGAATTGGTGGTATTC Gene GeneID:532862|SEC24B:XM_002688081:121_cdna UTR3_Alt 2 NULL GeneID:532862 6 GENE SEC24B NULL SEC24 family, member B (S. cerevisiae) EMBV3_03888 TACCTCATTGCTCTTTGGCGACTCTTATTGTTGGAAATCTACATTTCTGAAGGAACCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38509 GCGCTGTGGTTTGCCATGAAGGAGTACAACAAGGCCAGCAAGGACACGTATGTCTACAAG Gene GeneID:531692|LOC531692:XM_002692173:88_cdna Constitutive 0 NULL GeneID:531692 13 GENE LOC531692 NULL similar to cystatin 13 EMBV3_25304 AGGGCAGCTACAATAAGGTATTCCTGGCCAAAGGCAACATTCCCGCCGAGAGCTACACTT Gene GeneID:512891|PSMD8:NM_001035111:610_cdna Constitutive 0 NULL GeneID:512891 18 GENE PSMD8 MGC127792 p31 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 EMBV3_35778 TTGGCTCCCAGATTGCTCTACTGTGCCTCTCAGAAATATAAGGGAGAATGTACTTTACCC Gene BVV0102_171815 - 0 NULL GK000010.2:36872302-36897173 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013500 TCONS_00013502 TCONS_00016828 TCONS_00016829 TCONS_00016827 TCONS_00013501 TCONS_00013503 2 XLOC_008142 XLOC_008920 Coding TCONS_00016829 XLOC_008920 Coding Coding OIP5 10:36888323-36905791 = TSS11654 10143 1 TCONS_00016829_1 229 0.0926747510598442 5 0.419591229175016 8.08764576410234e-05 6.42553894028342e-05 0.000117583580127031 0.000582064828372 0.000105408598397585 0.000143736154253192 3.42897240031325e-13 0.000452378699800636 4.07896623279174e-05 0.000113579040942181 9.29289595006482e-06 0.00011955747630824 2.70836382635722e-05 1.09080127364008e-05 8.94134066211169e-08 0.00413432901552582 0.00473294729700345 0.0015895782529643 0.000334497404326594 0.000451329435910021 0.00026036295600661 0.00299998864464271 0.0027568906772915 0.00417890547268919 0.000274558505069074 0.000137388126271759 0.000272192132199075 0.000611640023517969 0.000528746315159007 0.00110584229207055 XR_236092.1 LOC100847604 PREDICTED: Bos taurus uncharacterized LOC100847604 (LOC100847604), 0.0 1.053e+04 100.00 0.575569358178054 XR_243125.1 OIP5-AS1 PREDICTED: Homo sapiens OIP5 antisense RNA 1 (OIP5-AS1), transcript 0.0 1676 75.03 0.255348516218081 TCONS_00016829_1 sp|O43482|MS18B_HUMAN MS18B_HUMAN Protein Mis18-beta; 6e-137 389 82.10 0.995633187772926 1 coding 0 0 0 0 0.176177606578619 0.311552773228559 -0.0356630591642216 0.520482750090648 CGTTGTCCAATGAGGACGCAGGAAAAGAACTTGGGGTGGGGCCTGAATAGTCTTTGAAACGGTGGCGCCGACTGCGGGAAAATGGCTGCTCGGCCGCGGAGGCATATCTCTGGAATTGCAAAGCAGCCACAGGGTGACTTCTGTGATGGGGCTAAGAAAGCGATTGATGAACCTTCTTTTGCGACTTCCATGGAGTGGGACACGCAGGTGGTGAAAGGGTCTTCGCCGGTCGGCCCCGCAGGGCTGGGGTTGGAGAAGCTGCCGTCCCGCCCGCGGCTGCCGCAATGGCTGCAGCCCGAGAGATGCGCTGTGTTCCAGTGCGCGCAGTGCCACGCCGTGCTCGCTGACTCTGTGCACCTCGCCTGGGACCTGTCGCGGTCCCTCGGGGCCGTGGTCTTCTCCAGAGTCACAAATAATGTAGTTTTGGAGGCTCCGTTCCTAGTTGGCATTGAAGGTTCGCTCAAAGGCAGCACTTACAACCTTTTATTCTGTAGTTTCTGTGAGATTCCCATTGGTTTCCACCTATATTCTACCCATGCTGCCCTGGCTGCCTTGAGAGGCCACTTCTGCCTTTCCAGTGACAAAATGGTGTGCTACCTCTTAAAAACAAAAGCCATAGTAAATGCATCTGAGATGGATATCCACATCATCCCTCTACCAGAAAAGGTTGCAGAGCTGAAAGAGAAGATAATGTTAACACATACTCGCTTAAATTCACTCATGAAAATTCTGAAGGAAATGCCTCCTGACCAGTCCAAGCTAACAAACTAATTCAGAATCAGAGGTTGAGTATCAGAGGCAGGCCTTATTGCTGTCTTCAACAGGTGCTGTTTGATCATTTCTCAAGAAACATCAACTTCAAGAATGGATAGGAAATGTGGTTTATTATGTTTACCTCTAGACTGATTTTCCAAGTGATTTGTGAAGCTGTTTCTGCTACTGCTAAGTCACTTCAGTCGTGTCTGACTCTGTGCGACCCCATAGACGGAAGCCCACCAGGCTCCCCAGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGAGTCCGACCCTCAGCGACCCCATGGACTGCAGCCTACCAGGCTCTTCGATCCATGGGATTTTCCAGGCAAAAGTACTGGAGTGGGGTGCCATTGCCTTCTCCAAAGCTGTTTCTAGAAGATGACAAACAGGAGACTTCTGTCCAGGTTTCATAGCTATTTGTCTTATTTTGACTTCTTATCAATTTCATAATACTTATTTTTGAAAACATTCTGATGGCAAATTTAAGAATTAAGAGCCAATGTCCCATGAATCCTCTGATCTAAAGCTTCCTGAGTGGCCTGAAAATAGAGTTGTACTTCTGTTAATTAACATTACATGGAGCAATTGTCATATGAATACTGAGAAATCATTTTTTTCTTACATGAAATACAGGTACATACATATTCCGTAGGTAATGTTCAACAAGTTAACTCCATAATATGTATTTATCTTTATCTTTTCAGTTTATAACTGAAAAGGAATAGTAATAACAGGAAAATAATAAAAGGAATGGTAAAAACACCAAATATTCACCAAATGCTATTTTCTCATTACTTTGCTTTATGTAGCACTGTGGTTCAATAGCTTATCATATTATTCACTTAATAAATAGCTATAAAATATTACGCTAGCTGCTAGAAATAAGCAAAAACCGCTATTCTGTATCTTCGGAGCTTATAATCTAGTTAGAGATGGACATTCAAATAACCACATGAAGGCATTTAAAATTACAACTGTAGTAAGGGTTTTGAAGAAAAGGGACATAGAGAAATAAACACACATAGCAGGTACCTGACCTGGTTTGGGGGTCAGGGAAGGTCTTTCTGTTGAAGTGTTTCAGCAGTGGTCTGAAAGATTGGAGTTAATAAGCTGATAGAGGGAACGGCTTATATGAGGGCCCTGTGAGGCCCCTCAACAGGCATGTAGGAGTTGTAATAGTGTCCAGAAACCAGAGGCTGCAAAGCTGTATTGGCCTCCTGAAGGATATTTGTTTTTATCCCAACAACAATGAAAAGCTCTTGGAAGAATTTTAGAGGAGGAAGCCTATGACAGGATCAAATTTTCTTTTTCAGAATTTCATTGTGGTTGTCCTATGAAGAACGGGTGAGAGGGAGGCAAGCAGACCTAGAGGGGCTGGCACTAGTAGTCAGATGATACAGCCAAGGGGTGGTGTGCACAGGTAACATGGTTCAGACGTGGCTAGTAGATTTAATAGCAAGTTCTTTCCCTTTTTGACTGCATAAAGGATATTTTCCTTTAAAAATATTTGAGAAAGAAAATTCCGACTTGCTTTATGCTTTACAGTTTGCAAAATTTGGTTAAGTAAGGAGGAAGCCTCTGGCAACAAACGGTACCAGAAAAGCTCTATTCCTGAAGAATGAGACCCAATAATAGTCTCTACTGAATCATCCTGGGGTTTCTACTGTGTATGGTATGTCTACCTCAACATATTTTATCTAAATTAAGCTTGTCTTATGTAGCTATTTTAACTTTGGATTTGCTGTTTTGGTAAACTTTCAATGGAAAATTAAATGCTTAGACTTGACATCTAATTAAGATGGCTGACTTTAAATTTTTTTCCCAAATACAAATCACGTTTACTCTAGAATCAAAGTCAGATATAGTAGACGTGTGTAAAAGTAAAGGGTAAAGTACATTCTCCCTTATATTTCTGAGAGGCACAGTAGAGCAATCTGGGAGCCAAATGATTTGGATTCAAATTGTGGTTTGGGTACTTATTAGCCATTAACTTGAAGAATTAAACTCTTCTTTTAAAATAGGGGTTAAAAGCTAACTAGGGCTACAGTGAGGATTAAATAAGTTACTGAATACATCTCATGTAATTGAGTAGTCCTTAATAGTAAATGCTTAATAAATGCTAATTATTATAACTTTAATTCATGTGGACAGACATAATAGGCAGTAATATTTTTCACATTATTCTGCAATCTGCTTCTTGTATAGCACATGTCACAGCTTTCTATACCAGGCCTCACCAATTACTTAACACTTACATATGATTCAGTCATATGAATGCATCAGAATTTAACCATTCCTATACTGGACCCTCGTACATGTCTTTGCATATCTGTCCAGGTATTTCTGTAGGAGTGATTCCTAAAGTGGAAGAGTCAAAGGGCATGTTCATTTCCAATTTTGGTATATGCCTTTTATAAATGATGTTATTGATACTCACAAATGACTGACTTTTAAACAAGCCTTAGTGGTATAAGAGCTCCTCTGGAAGTCTCACATCAATGACTGGCTGATATTAATAGACTGTAAAGATATCATTTAGCATTGTATATATATTGAATAAAAGTATTTTCAAAATTCCATGTACTTAAGACTTCCCTGGCGGTCCAGTGGTTATGACTCTGTGCTTCCACTGTGGGGGACATGGGTTCAACCCCTGGTTGGGAAACTAAGATCCCGCATGCCATGTGGTGCATGCTCCCCCCCCCTCAAAAAAAAAATCCATGTACTTATAAGAACAAAAAAATTGCATATTGAAGGTTTCCAAGTTGTACACTTTCAAGCTCCTCAACTAATGGCATAAACCATCTCAGTTTTTGTTAATTCCACCACCTAGCACAGGACGTGGGAGTAGAATGTATCACTGTGTTAAATGAAGTCTCAGAAATCAAAGGAAGGAACTATTACATTAGTTGTCACATCACAAAAACCACATAGCTTGTTCTTTGTTAACAGCCAAATCTCAAGGAAGCTTGTAACATCTACTTTCTTAAATTTGCAATAACTCCTTTCCCCTGAACCTTCCTCTTTAGTTACTAACTTTTTAAAGTTAAATATAAAAGCATCTTAAATGTTTTATAGTAAAAGCATCTTCAATGTTTTATATATTTCAGATAGAATGGATTATCTGCAATAATTTTATCATTACTGAACTTAGCTCACTTATTTCCTTACCAGAAACTAAACATTTGCTCCTAGACCTAGCATAAAGTTGGTCCTAAATTTAGGTTAAAAAGGGGGATGGCATAAGGGCATACTTTAAATGTGGTGCCTCTTTATTCTTATGGTTACCTGTTTTTTCCTTGAACTACACCAGAAACTGCTACAACTTGTTATCAAGAAACCCAGGTCCTTTGTTTGACATCTGGAGCCTACCTCAGCACACATCTGTGAAGAGGCTCCTTCTTCAATCTCCATAATTTACTGCATTATTAAAATTACCCATTCCAAATAATACCACAGTAAAATTTCAGTGCATTCTCAGCCCATGCTGCTTTATTGCCAAAATATATATGTACACAGGTGCAGAGTTTCTAACTCTTACAGCAGTTCCTTTTTACAGCAAAGAATAAAATTTCATCTACAGTCCCAAAGATGCATAGATTAGAAAGCAAGCGGCCTTTTGTAAAACTCCAAACAGTCAATTAAAGTCTTTTAGCATTATCTTATATACCATGGGAGGGAGAAGATGCTGAGCAGTAAAAACAAGCTAGTGAAGTAAGTCTATGTGAAGGTTATTCTAATATGAAGCTTTTAAAATTACCAGTGATAGGTGGTTTTAAGGTAAGGGTGAAAACATTACTGTTGCTTAAGGACTGATGATATTATTGCCAGAATACTTATCCCTGGGAGAAAAACATTTTAATCTATAGTGTGGCATACCATCACCAAAGGAGACAAAATCTGAAAATTCTAACCTTAACATATCTATTCTGACTTAAAGGTTTAGAAGTATGAGTTCCTGGAGAAATCTGTGATGTTTGGATTTCTAACATTTTAATATGCCCTAGTGGAATAATGGAGACAGAGATTAGAGAAACTCCGTGAAGAGGCTCCTTCTTCAATCTCCATAATTTACTGCATTATTACAATTACCCATTCCAATCTTTACTTTCTTTACATTCTTCAATCTTTACTGGTTTGTTTGGCAGACATGTTATCGTTAAGTACCAAAGAGAAACTTTACATACGGGATATACATATAGGATATGACATTTCACTTCCTGAACTGAGTGAAATGACTATTAGTAGTAATTCAATTTTTAACTACTGGAAAGTTATTCAAAGGTATTTGGAATCAAATCCCACAGCAAAGATTAAAATCAGGTTGAAATAATTTTGGAAAAAATATTTTTCAATCACAGAATGTGAAACTGGATGGTGCCTAGTGAAAACCAGTCTAATCCTGAATTCTCTTCTACTTAGGCCTCTTTCAGATACAATGAATCCCATTTGTACATTTGTCATTATCACATGTTCTTACATGGGTTATTTCAAAATCAGAAATCATCTCAAAAAATTGTAAGCTATCACAATAAACTGGTCTATTTTCTACATCAAGAAAATAAATGACAAGGTTTTTCTTCAAAATGGGAAAAGCTGCTCTTTTTACCTGTCATAAAAAACTTTAAGCAACAAATTATGAAGTCTAACCAAAACATTAAGGATAAAACTCTGGCTATAAAACTTTTCTTTGAAAATTTGAATACACGAACAACAGAGAAACCAAACCATAGATGTGTGTGTATTTTAAGGACTATTTCCATAAAATGTAAAGGGCTCCTTTGCTGGAAGGAACTCTTTCGGCTGGTTAATAGCAGTACCATCCAAAGAGCTGCCCAGTTACCTGAAAATCCTGCAACATCTGAAATACGTGCATTATTGTCTCTATATTCACTTTCAAGATTCTAGTCTTACAAGAGATCCAAACTTAAGCCACATAAACTTTATCAGACAAATCCCATTCCTGGTTACATCTTCCACACTGGCACTCCATACCCTTTCTGAAACTCTGCACTTGATTATTAGAGCCACAGCAGCTTTTTACTCAACATGCTTAGTTTGTGCTTTTTGTTTTTAAACATGCTTAGGGACTAATGGAACCAGGCAAGAGGTTAGAGGGTGAGCACTGTTATGCTCTGTTCTTGACAGTCTGAATGTCTTGTGGTTGCCCCTGTTCTAGCTCCCATTTTCAATGGAAGAAAGAGTCTTTACTTAGAAAATGAAAACTAATGACCCAAACAATAAATTCAAGATAGTGGTTTAAGTCTCTATTGCTTCATTACTAATAAATGGATATATATAATTACTAGTAACCACATTAACACTGTACATTTTCAACTATGCATTAGGAATATTATACTCCTAAGAGTTATGGGCCTGCCACTATTGCTCATACTTTCATCCAGACCCAGTTTTAATAAACATGCAGAGTAAACTCTTTGACTAAGAGGAATTAGGGGAAATTACAAGGATACATGCACTGTAAATACAGGTTAATAAAGTGATTGCTTAGAAATGCAGGCAGCTGCTCCACATCTATCACAATGCTGCTTCAGAATAGAGGTACAAAAGTCACACACAAAAAGGTTAAAATTAGGACCACTATTCAGTTATAAAAGGCTTAATTGCAAATTCTGGTCCTTTCGGGTAGAGAATAATGTAAAAATTTGGGAAAAGAGTACTGACAGATGTCCTCTTGGAGCAGTTAAGTTTTCTTGGCCATTTACTGACAGTGATGGCATAGAAGAGCATACATAGGTGGTATAGACGATGAAAATGCTCTTAGGCAGAATGGTTTCCGATTCACGTTAATGAGCATACCTGCACAGCTCCCTGGGGAAAAGGAGTTTATGAACAGCAGAGCTAATACAATGTAAACTCAAAAATCAATGCCCTGAAGTTTAGCATAGCCCTCTGCTTTTGAAAACTGTTGGCCAAGGAATCCTTCCAAACATGGTATAATTAACAGCCAAGCAATGTTCTGAATGAACTAGAAGCAATTTGCTTGTACCAGCAGCACCATGAGAATGTAAACTCCTGGAGGCCAAGGGTCTCTTTATATTTTGCATATCACAGGTACATAAAGAGTAAACATGGGGTCACAATATTGAAAAATAATCAACCATACTTTGAGACCACAAAAACTTAAGAGCACATTTGAGCATTTATAACTATTAATGTGGCTGTTGAGGGTAATCTTTAATTGTTCTAAGTAACTAAACTGTTGACATCACTGTAATATGCAGTGGTGTCCTCATGATCGTGCAGATGTCTGAATATTGCTTGGTTATTCCAATGCCTCTGACACCAACTGAAGGCATAGGACATACAAAGAGGAGCTATAATCATTTAATATAGCCTTTCTCTATCCTTTGGAGTTGCCATTTAAGAATTTAGTACTCAAGAGGCACTATTTTCTTAGATCCACTCTATTTCTCTTTCAGCTTTTCCCCCTGGGAAACAAGGGAACACACACTTTTTGGGAATCTTCAAGGTACTAAATGGCCAAGATGAACATGAGGTAAAAGCAGTCGCCCTTGTTCCACCATTACATCCAGATGTGAGAGCTGTGTTATTCTTCAGATCAAGAAACTAGTTTGCTGGGTTCCTGTTAAAATAAGCTGTCATAGACCACAGGCCTTAGCACATCTACATTAGATGATGTACTGTCTTTGGCCATTCCTTTCAGTCCTTTTGCTTAACACCTTTAAATCCTAACTCCCCTATACTAATAGGCATGAGGAAAAGCCAGTTATCCAAGCTCTTGGTTTGTTTTTTAAACCATAAATATATACACACAACAAACTTTTCTCTCTTTAAAAAATGTACCCAGGAAACTAATGGAGAAAGATGAGGTGACAAAGCAAAATGTACACCATTTTATAAATGGCCTGTTGCTAAAGAAACGTCATGAGCAAAATCCCCACACGATGAGCTTCAGTGGGGATACATCAGCAGGAGTATGTTTCCAGGTTAAGCATCAGATAAGGTTAATTTAATGAGGCTCTAAAGAACCTCTGCTCTAGCAGCCAAGTATTTAAACTTTGACTTAACACAAAAGTTGCTATTTCTCACATGATATATTCATGCACATTCATAGTTTTTTTAAGTACCTTTATACACTCTTTATCCAAAACATCTTTTTCCTTTCATGGAATTCTGTTGATCACAGAGTCTCAAATTCAAGTAGTAGTCTATTGTACAGCCTTGCTAATGCAACTTATTATACATGCAAAACTGTTATTGCTACTGAAATTCTACCTCTTGAAAATTATGAGCTTGTTTTATGGCTTTTTTTTTTTTTTTGCAACAGGAAATATCCTTTCCTATATACTCTGTTGTTTTGCATTCATTACCTTTTCAGAGGTATTTTTAAAAACGTTTAAATGCTTTTCAGAAGTGGATTCTCCCAGGCACTAAACTACTTGAACCAAGAGTACAACCACTTTAAATACAATCTAAGAACCTAAACCTGGGTCCCTGGAGATCTGCTGCCCAGGAGTCGATTTGTTTAAGCCTGCTTCTGCACGTGTCATACCACATTAAAAATGTTTTGCATTTCCTATCATACTAACGTAGAATCTGTGTATCCTGAACTCTCCTGAGATCTAAAAATCACCCCAGAAAACTGCCATTTCCAAGTTCTCAAGAGAACTTTTAGAGATAGGAATTTCTTTTCTACAGAAAGCTATGCTTTCAGAACAAAACAAACTTTTATTTCTACAAGGAAAGCAAAAAAAGTGAAAGCTGTCTGAGGCAATTACTATAACCAAGCAGAGAATATTAATTCTCTAGCCTAGGTAGGCTCCATTTAGCTACATTTCCAATTCTCATGAAAAGGTCTGGAATCCCATCAATACACAATTCAGCAGATTTAGAAACAGGAAAAACCCATGAGAAATTCATCTAGGACACTCTGAACTACTGATCAGTGTTGTTCTGTTAACATGTAGCATACTGTAGATGGAAGCATAAATGGCCTGCAGATTAGAAAAAGTCACTTGAGCAATAAACACAGAATCTTGGTAACATGCAATATAAAATAATCTGATGCAAAAGGAGTGGGAAAACAATAAACCTACCAGACATACAATGCGAAAACAGTGTAAGAACAATCTCACTTCAAACTTAAGAGAGCAAAGCCGAATCATGAAATAGGGCCTCATTTTGATGTAAGGTTTCATAAAGACACAAAGGCAACTGCTTTCCAGCTACCTCATGGAAAGCTTAAATATCCTCAAAGACAGTATCTCATGTTGTGACCCCACATTTCTATTCCTAAATGAGTACTTTTGGCTTTAATCTCTTTTTCCCCAGGGAGAATATCACAGATTCAAATATTTATGGAAAAAAAAAGGTCTAGGTTTCCCAATCTTTTTACACTATTAGTTATTTTCTGTAATTCATCCTGAAGTTTAAAGTATTACTAGGCTCATGCACTAACCCCTAACATGGCACTACAATATGCTACCAAGCACTAATGCTTACAAAACTATACACATCTCAAAATGGAAGACATTGGTGATTTTGTTGTTCTTAAACAACTTGTAACATTTGTCCACAAGTATTTAGAAAAAAAAATATACATATATATATTTCTATTGCACATATCCCGTTTTTGTTCAACTTTTTAAAAGAAAAAATGCCAGCTAACATGGATGAGCAAAGTAAAGGAAGTAGGCACAGCTACAGACCGAGGCATAGTCCTGCCTAAAATTACAGCTTTTGCCATCATGAAGTGGAACAAAATACATCAGGGAAAACAATGTAGGAGTAAACAATGGGCAAGTACAACTGGAATATACCCATTTTGTTAAATGCCATCTGATGAAAATCATGCAAGATGCAGAAACAATTTGAAAGAAAGCATTAAGCAGTGGTCTCTTAGCTGTGAAATGAAAATATGTAAAGCAACTTGAGAAGATGAGTCTGATACACACACACGTATTTAAACAAGCAGGAAAGACAGTTTCACTGGTGCTGCTGGTACACGTCTCTTCTATACCCTGCCAAATGATTCTTGACGAAAAAAGGGGGGAAGATGGGTTTAACAAACAAATGTTGATATTTTCAATGTACCAACGGGACTCATATAGGCAGGTTCCATTCCTAAAGCATTCCTACACTGTTTTTTGACAATTCCAAAATACTGAGAAAACATCAGGAAATGGCTGAGAAGTTACTAAGAGAAAAATTTAAGTTACCTTTATCCAAGCTACTTTGACTATGCTTTACACTGAGTAATTGCTCACAATTAAAGGAAATTATATTTTATCTATATTATGTAATTATTTTGCCAAAATG EMBV3_19656 CTCACTGCCTCCATGGATGGCAAGATCAAGCTGACCACCCTCCTAGCCCATAAAGTCTGA Gene GeneID:540606|WDR91:NM_001046483:26_cdna Constitutive 0 NULL GeneID:540606 4 GENE WDR91 HSPC049 MGC128866 WD repeat domain 91 EMBV3_17316 GATTTCTCTCCACCTGCCCTACCTTCCACTGTGAAATGCATGTGTACAGTGTATGCGTGC Gene BVV0101_048545 + 1 EMBV3_33245 GK000016.2:36290570-36478829 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03854 ATCCCTGGGTCCACAAGGGCTGTGGGGGGAGACCTAGTGAGAATGTAGCATTTTGTCCCT Gene BVV0102_201351 + 0 NULL GK000010.2:35808330-35856696 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020516 1 XLOC_011191 NonCoding TCONS_00020516 XLOC_011191 NonCoding NonCoding - 10:35852894-35854267 - TSS14406 1373 1 TCONS_00020516_2 107 1 0 0.000188279817498974 3.65928976762195e-05 0.000121319699528576 1.20963651465104e-05 0 8.33692591190086e-05 8.49484070089629e-06 0 0.000143665923564182 0.000152832283851087 1.66728719502358e-06 4.16687525729521e-05 0 6.85214250673072e-06 0 0.0032701901782538 0.000181379684026662 0.00201019658520449 0 0.000612816209160397 5.30644612158975e-05 0.00205919608708942 0.00104235474052084 0.000427358880326558 0.00126155910286924 2.56572516310759e-05 2.98719156592935e-05 0 4.24291938419003e-05 0.000547363937319865 XM_005211591.1 BMF PREDICTED: Bos taurus Bcl2 modifying factor (BMF), transcript 0.0 2473 100.00 0.997815003641661 NM_033503.3 BMF Homo sapiens Bcl2 modifying factor (BMF), transcript variant 2, 2e-101 374 71.68 0.530954115076475 0 noncoding 0 0 0 0 0.200186044712314 0.293568541226942 -0.0135880334301181 0.772546660906193 GCTTTGCTTTAAATGGTTTTATTAAAAACTGTACCAATTGATGGAGGCAAAGATATATACACATATATGCACGGGAAGAACACACAGCCAAATATTCTGTACAGGTTTAGAAACAATGAGTTCCCATCCCCTCCCTCTCTTCTCTTGTCTCTCTCCCAGAGGCAGAGCACAGTGAACCCAGGTCAGCTAACCTGGGAGGGACAAAATGCTACATTCTCACTAGGTCTCCCCCCACAGCCCTTGTGGACCCAGGGATGGAGCAACCTGCTGGGCGATGCTCACAAAGCAGGGAGAGGTGCTGGTCTGCTGTGCAGAGAGAAGGGCAGCACGGACTAGGAGCCTGCAGAGCTCCAAGCACCTTCAGCCCAAGAGGCTGACACATCTATGAAGCATATGGCTTGCTCTGCTGTTCCCTCAAGGCTCAAAGTGCCCACCAGCCTTGGACACCCACTGCTCAGTGTTCCCAGGAGGCTTCACAGGCTAATGAGTTAAGGAGTCAGCCTGAGTAGTCTATCACTAAGGTGTCCCCACCCACACACAGAGGGACCCTGCAGCACCAATGTGCAGAAGCCCCCACAGAGCCGATGTGCCTGCTTCTGCTATCCCTCACTTGCCCCACTCCACTTCATCAGAACTCTCTGCGTGCTAACCAGGACACTCACAGTGGCTCCCCAGCCCCCAAGTGGAGGAGGCCCTGGCTGGACTATGTCCCTCCTTGCCATGTCCAGCCCATCCTTGGCTGAGGCTGGGCCACTGGAGACAGACAGACAAGTCAGCTGGGCCCCTCTGAGCCTTTAGGACATGCCTATCACATAAGCCCCTTGCTCTGGGGGCTTGAGGGAGGTGATCCTTGGACTGAGCAAGAAAAGGCCCCAGGGGCAGCCTCTTCAAAACCAGTCCAGGCTTTGAAGCAGGCAAAGATAGAGGAGGCCCAGCTGAGTCCTGCAACTGTCTGAGTGAGTGAGACAGCTGGCCTGAGGGGGTTCCCTCCCTAGTTCTACCACCTTCCAGAAGCCCCTACTCTGGGGTTCTTAATGAGAAGAGTTGTTTTGACCCTGAACATCAGGCTTCCCTTCCCTCCAGGGCAATTCCTACCAGGGAAGAGTTTCCAGTCCCTCTCCCGAACCCTACCCTCAGCTAACCACAAAAGCTCCACAAGTCTTCTGTTGGTTACAGGTCAGGAGCCAGGTCAGACTCTCCCTCCCTCTAACTGATTCTCCACCCCCTAACTGGAGACAGCCAAGCTCCTGGGGGTCATGGCTGGGGAGAGGGAGCCCAGGGGAGGGACGGGTCTCCTGAGGTTGAACTTGAGGAATGTTCAGACCAAGTCACCAGGCAGAGGGGGAAGAGGCCAGTCTAGATCACTACACCAA TCONS_00016773 . 3' 75 TCONS_00016773 . 3' 1447 EMBV3_37448 TGCAGGCAGAAATGAAGCCAATAAACAAACATAGCTGCCACACTCGCTTCCTTAGCTGGG Gene GeneID:515354|TBCC:NM_001075709:282_cdna UTR3_Alt 1 NULL GeneID:515354 23 GENE TBCC NULL tubulin folding cofactor C EMBV3_40846 TGAAAAGAGGTCCAGATGAGAGCAGAGGTAGAGCAGGAAGTTACACCATCTGTGTGCAGC Gene GeneID:520588|LOC520588:XR_083879:43_cdna Constitutive 0 NULL GeneID:520588 16 PSEUDO LOC520588 NULL similar to chromosome 1 open reading frame 9 EMBV3_10294 CAGTGGGAGGCTGAGATGCCAAGACTATGCCCGGAAAACCCGAGGCCAAATAATGATCTT Gene GeneID:617437|RGS4:NM_001046600:344_cdna UTR3_Alt 2 NULL GeneID:617437 3 GENE RGS4 MGC137562 regulator of G-protein signaling 4 EMBV3_41582 ACACGGGCCATTTCTACAAAGCGCAAAGCTTACACTGCATTCAGGAGGAGGTCTCAATAC Gene BVT0102_036021 + 0 NULL GK000006.2:104657219-104672732 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204038 1 XLOC_124321 Coding TCONS_00204038 XLOC_124321 Coding Coding PPP2R2C 6:104597759-104659396 = TSS152711 3854 1 TCONS_00204038_2 450 9 0.937617626062691 0 3.72467061128833e-07 2.66793398990326e-07 1.07734116809602e-06 6.40526465688547e-07 6.96106097023738e-07 0 0 0 0 3.74205374641697e-05 2.04112738251824e-05 0 8.37432247688074e-07 4.55291260158354e-06 0.00338539865102958 0.000439610159936556 0.00185544937998173 0 6.21988162148145e-07 3.98181536343558e-13 0.000314423691239963 9.69660360061055e-05 0.000328938128984642 0 0 9.09490552533688e-07 4.73530184555154e-05 1.51974016088022e-06 0 XM_001250700.3 PPP2R2C PREDICTED: Bos taurus protein phosphatase 2, regulatory subunit B, gamma (PPP2R2C), mRNA. 0.0 6810 100.00 0.979501816294759 NM_001206994.1 PPP2R2C Homo sapiens protein phosphatase 2, regulatory subunit B, gamma (PPP2R2C), transcript variant 3, mRNA. 0.0 1828 91.71 0.331344058121432 TCONS_00204038_2 sp|Q9Y2T4|2ABG_HUMAN 2ABG_HUMAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform; 0.0 886 99.76 0.94 1 coding 0 0 0 0 0.0392069999027052 0.793279723800088 -0.0187817487716146 0.699698208457198 ATGGGCGAGAGGAGGGGAGGAGGGATACCAGCCAAGGGACCGGCCGAGTGCCCACCTGGGGCCACCGCCAGGAGGAGCGCCGATATCATCTCTACCGTCGAGTTCAACCACACTGGGGAGCTGCTGGCCACAGGCGACAAGGGTGGCCGAGTTGTCATCTTCCAGCGGGAACCAGAGAGCAAAAATGCGCCACACAGCCAGGGCGAGTATGACGTCTACAGCACTTTCCAGAGCCACGAGCCAGAGTTCGACTATCTCAAGAGTCTGGAGATAGAGGAGAAAATCAACAAGATCAAGTGGCTCCCGCAGCAGAATGCAGCCCATTCCCTGCTGTCCACCAACGATAAAACTATCAAACTATGGAAGATTACCGAACGTGATAAGAGGCCCGAGGGTTATAACCTGAAAGACGAGGAGGGGAAGCTTAAGGACCTGTCCACGGTGACGTCACTGCAGGTGCCCGTGCTGAAGCCCATGGACCTGATGGTGGAGGTGAGCCCACGGAGGGTCTTCGCCAATGGCCACACCTACCACATCAACTCCATCTCCGTCAACAGCGACTGCGAGACGTACATGTCCGCGGACGACCTGCGCATCAACCTCTGGCACCTGGCCATCACCGACCGGAGCTTCAACATCGTGGACATCAAACCAGCTAACATGGAGGACCTCACGGAGGTGATCACCGCGTCCGAGTTCCACCCGCATCACTGCAACCTCTTCGTCTACAGCAGCAGCAAGGGCTCCCTGCGCCTCTGTGACATGCGTGCGGCCGCCCTGTGTGACAAGCACTCCAAATTATTTGAAGAGCCCGAGGACCCCAGTAACCGCTCCTTCTTCTCGGAAATCATTTCCTCCGTGTCAGACGTGAAGTTCAGTCACAGCGGCCGGTACATGCTCACCCGCGATTACCTCACGGTCAAGGTCTGGGACCTGAACATGGAGGCGCGGCCCATAGAGACCTACCAGGTCCATGATTATCTTCGGAGCAAACTGTGTTCCCTGTACGAGAACGACTGCATTTTTGACAAGTTCGAATGCGCCTGGAATGGGAGTGACAGCGTCATCATGACCGGAGCCTACAACAACTTCTTCCGCATGTTTGACCGGAACACCAAGCGGGATGTGACGCTGGAGGCGTCGCGGGAGAGCAGCAAGCCCCGGGCAGTGCTCAAGCCGCGGCGGGTGTGCGTGGGCGGCAAGCGGCGACGGGACGACATCAGCGTGGACAGCTTGGACTTCACCAAGAAGATCCTGCACACGGCCTGGCACCCGGCCGAGAACATCATCGCCATCGCGGCCACCAACAACCTGTACATCTTCCAGGACAAGGTGAACTCCGACATGCACTAGGTGAACCGGTGGCCGCGCTGGAGCTGCCACTGCGGGCGGCGGGGCAGGGGGTGTGCCGGGCCGCGTCCCTCCAAGCATCCCAGGACCGGACCCACCTTTGCGGATGATTTCTACTGGAACACAGGACAAAGGAGTCACAGTAAACCGACGGGATCGCCGGCCTGGAAGTTCACTTCTTGCATCCCTTACTTTAATCGCGTGCAGTTTCCCACCTGCTTAGGATGTTTTCGTCTGCGCGTTCATTTTTCACGCCAGCGGTTTCCTTTCCTGGGGGCCTCGGGAGCCCTGGAGTGGTGTGTCTCGCGCGCCTCACTAGCCCCAGTTCAGGGCTCCGGGGACAGATAATGAAGTCAAACAAGCCAGCCAGGGATTCTTTTGATGCTAAATGGAGCAGTTGCCACTGTCTCAGAGCCGAGAGTCTCACCTTTTGGCATTTTGGATCGTGAATTCATGCTGAGAATTTGGGAGGTCCTCTTTTAGGTTATTTTAATGTCTTTCAGAATATCGCAGGTTCCTTACAGTTTCTCGAGAGGAAGGGGAGCGGAACCCACCTGCAGTGGGGGCGTGTTTTCTTCACCACTTAACCACCCTTCTCAGAGCACTTGCCCAGTGGTAGGCGTGGTGCCGGCCCTCCAGGCCCGCGGGTGTACCCTCCATGGCCTCTGTGCCGGCTCGCCTGTCATTCTGCAGCTGTCCTCCGCATCTCCTGGACACAGGAGATCCAGGAACTCGTCCTGGCTCCCTCTGTGATCTTCCTGAATATTCATTATGACCCTGAGAAGCGGGGGCCCATTCATTTCTTCCATACATGCCAACTGCACACTGAGTGCCAGGCTCCATGCCAGGAATTAAAGGTGAATAACTTGTCATTCCCCACTGTGTGCATGGGAAAACTGAGGCCCAAGGCCTGTATCAACCAAGGAGGGGCCAGGAATTCCGTCCAGGCCTTCCCACAAGACCCTTTCCCTCCCACCATGTTGGTGGCTCATGTTAAAGCAACATTCCAACCTGGAAGGTTCTGGAAACATCTCTTCATCTTGTGAAGCAGGACAGAGCAGGTAGGATGATGATGAGGGTCGGGGAGAACTGAGACGCAGAAAGGAGAAGACACCCTCGGGTCTCCTCGCCTGTTTGGTGATAAGGAACTCTGCCCTCTCTCCACCCCAGATGTGGACCCCAGCTCCTTTTCCAGATGCACTGAACTGTCTCCAAAAGAAAATTGCATGTTATGACCATTTTAAGATACCTTTTCTTTTCTGACCCCTCGCGGGCCAGTGAGAATGCGGTGTTTCCAGGATGCTTCCCTCCTACTTTGTCAGGATCGGTTTGGCCCACCCGCCAACCACGCCAGCTTGTCTTTGCCCTTGGAACTCCCAGCGGAACCACGTGGCTTGCATTTTGATTCAGAAAGCAGAGGCCCGACTGAATCTGACTTTTTTTTTTTTTTTAACAAGATGTAACCTAACCCAGGAAATAGACCCAACTCAAGATTTTTCTCAGCGGATAAATGGTCTACTTTTGTGTGTGTCAAAGCACAGAACGCATGTGCACTCACTTCCAGCCATACAATAATTACACAAGGAAATGGGTCCATTGATTTTTTTTTTAATCAACATGAATGAAGAATGTTTGTTTATATATCACTGTAAAATCCAGGTGACCTGGACAGTATTATATGTACATATCTATTCTAATTAAAACTAACAATCACAGGATTGGATTCCTTTTTTTCCCTTTGTAAAGAGGTTCAAGAATGTGATAAATTGTATAGAAATCTTGTTGAAGCCAAAATCCAGCTCTGAGGGCCTTATACAATTATTCGGATATTTGGCATGATCATTTCCCTTTGTGATTCAGATGCTGAGAGGCAATTTGCATTTGCAGATGGAGGTTACTGATCAGATCATAGATTTAACACGGACCATTTCTACAAAGCGCAAAGCTTACACTGCATTCAGGAGGAGGTCTCAATACAGTTCCTGGTTCCTTACTCTGTTTTAAACTGTGGACACCAAACCGAAAAGGGAGAAGAAAGGAAAAGATCTTCTCAGAAGAAAAAGCATGTCTTTGGATCCCTGGAAAATAATGATGTCCAAAGCGTAATGAACAAAAGCATTGTGAGTAAAATGTGTGTTGAGAAAAGATGTTGACGAGGGAAGAGGTAAAACTAGACGTGGCAGAAAGGCCAGTAACACAGTCACAAACTTTGCTTCCTTCCTGTTTAAATTTCCTGCTCTTTTTGAATGTACGAGCGTTCACATAGTCATTGTGGAGTTGTTGGGTTGTTTTTGTTTTCATTTCAGTACTCTCTGAGGACTGATTGCTCGGTGGCTTCGGACACGTGGTGGTAGATTAGACGGGCCTGACCATTTTGGACTCTGTAACTCACAGGTGCATTCTCGTTTTCTTGGGTGTCTCACAAACTATCCACCTGTTGAATAAAATTATAAATATGTTAATACCAGCTTTTTCCAATAAAATAACAAATGTTACATCGAAAA EMBV3_34648 CCTCCTGACCTACGTCCTGCAGAGGCCTCACAAACTTTGGCCTGTTCAATTCTCACTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01004 ACGTGCAGTTCGGCGAGTTCCTGATGATGGACATCTACAAGTACCACCTCCTGGGACACA Gene GeneID:100140210|USP30:XM_002694539:489_cdna UTR3_Alt 3 NULL GeneID:100140210 17 GENE USP30 NULL ubiquitin specific peptidase 30 EMBV3_28406 TACTTAAAAATATCTGTACCTGATGGATGTGTCGTGGATACAGTGGCCAGATTGTGCCCC Gene GeneID:534112|CNKSR2:XM_002700350:12_cdna UTR3_Alt 2 NULL GeneID:534112 X GENE CNKSR2 NULL connector enhancer of kinase suppressor of Ras 2 EMBV3_13907 TCTCTTGTTGGCATTTGAAGCAGCTGAAAGTGTAGGCATCAAACCCAGCCTGGAGCTCAG Gene GeneID:506538|CYTSB:XM_002695819:179_cdna Constitutive 0 NULL GeneID:506538 19 GENE CYTSB SPECC1 cytospin B EMBV3_43230 TTACCCTGGAAACGAAGTTAGAGACTTTGATTGGTAGCATCCATGCCCTGCCTGGGCTCA Gene GeneID:404177|KCNN2:NM_205792:216_cdna Constitutive 0 NULL GeneID:404177 10 GENE KCNN2 SK2 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 EMBV3_27390 GGGTGCGTCTTCACCCACGTCTTTCTGCATCACTGGTATCCACACCCTCTCCACTTATTA Gene GeneID:537614|NR3C2:XM_002694329:37_cdna Constitutive 0 NULL GeneID:537614 17 GENE NR3C2 NULL nuclear receptor subfamily 3, group C, member 2 EMBV3_08470 TCCTATAAGAATAGGCCTCCCGGCTTTTCCTCCACCACTACACTGATTTGCCCCAGTGTA Gene BVV0102_031329 + 1 EMBV3_11819 GK000003.2:110497534-110530532 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42712 GGGCGCAGATCTTCGCAGCCAGCTTCAACTCGAGCGCCGAGCAGGTGCTGTTCCAGAGCA Gene GeneID:100336608|LOC100336608:XM_002696091:138_cdna Constitutive 0 NULL GeneID:100336608 19 GENE LOC100336608 NULL angiotensin-converting enzyme-like EMBV3_38910 ATCACCACTCTGTGGCTTGGGCCTTGTGATGTTGTCTACCTGTGGTCATGCCTTAACTGC Gene GeneID:100336540|LOC100336540:XR_084020:283_cdna Constitutive 0 NULL GeneID:100336540 22 PSEUDO LOC100336540 NULL hypothetical protein LOC100336540 EMBV3_26935 AGGTTCTGGCGCCGCTGCCTATCCATGGAGGCACTGGAGATATTATTGCTGTCATGATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01458 TTTTTTTAATACAAAGAAGTCTGAAAATCATTATGGTCTATAATGATTTAACAAAGCTTT Gene GeneID:613649|KCTD6:NM_001101224:271_cdna Constitutive 0 NULL GeneID:613649 22 GENE KCTD6 NULL potassium channel tetramerisation domain containing 6 EMBV3_08496 GATCTACTTGCAGGTCATCTCCTTCTTGCTCCTGGGCCTGATGTCCATGATGATTCCCCT Gene GeneID:535872|SLC16A2:XM_002699994:96_cdna UTR3_Alt 2 NULL GeneID:535872 X GENE SLC16A2 MCT8 solute carrier family 16, member 2 (monocarboxylic acid transporter 8) EMBV3_18629 AACATGTCTTGAGGAGGCTGAGGATTGGCTGATGATGGCAAAGATACTGTGGGCTGAGAG Gene GeneID:100298891|LOC100298891:XM_002691931:2_cdna Constitutive 0 NULL GeneID:100298891 12 GENE LOC100298891 NULL similar to ATP-binding cassette, sub-family C, member 3 EMBV3_36303 ACGGTAGAGCACTCTGTTCACTTAACCACATCCCAGCATCCACGGCTGTTCCAGAAGCTT Gene BVT0102_386401 + 0 NULL GK000013.2:55237620-55291394 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049112 1 XLOC_029243 NonCoding TCONS_00049112 XLOC_029243 NonCoding NonCoding - 13:55242534-55243177 - TSS36288 643 1 TCONS_00049112_1 121 0.233281493001555 1 0 0 0 0 0 0 0 0 0.000386342216939415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.239860736432094 0.189765136422348 -0.0160027543322308 0.730293011261286 GGGACTCCTGACTGGGCCTGACTGGGTGGGGGGTGAGGCAGGCCTATCCCCAAGGTGGCCCTGTGAGTGATGCTTCAAGCAGTGAGAGCGGGAGAGGGTGTGGAGCAGGCGCTGCTAGTCACCTAACCAACCCTAATCACCTCCTCGTGGCAGCTGGCCCTACCGGGACAGAGCACGGGCTCTCCTCCCAGGAGAAGGGCTACATGTGGGCAGCCGGTCCCAGGGGCCCCCAGACGGTAGAGCACTCTGTTCACTTAACCACATCCCAGCATCCACGGCTGTTCCAGAAGCTTCTCTGGGGATTATCTCCTAATCTTCAAAGCACCCCCAAGAGGCAGGCATTCTGTTGTCCCCACTCTGCTGGGCAGGGACAGGGCTCAGAGCGGGAGCTGACTTGCCCGGGGACACACAGCAGGGGGCAGAGCTGGGCAGTGCTCTGCAGACTGCCCTGCAGTCTGGTTGCTCTGCGGCCCTGGGCCTTCCAGAGGCCCCTCGCTGGGGCAGTAAAGACAGACCCAGCCTGCCTTGGGTGCCAAGCATGGAAGACACGTGGAAGGCCTCCCTCCTAGTGGTCTTCAGGAAGGCAGCAGATGACACGACGGCATTTTCCATGTGAGGATGGATAAACAGTGGCTAGAGAGTC TCONS_00045618 . 5' 4916 TCONS_00045618 . 5' 4916 EMBV3_25364 CCTGCTTCTGGACACAGCTGTCCACTTCAGCCACCCAGGCGGTTGACACCAGCTCGCACA Variant GeneID:507152|LOC507152:XM_002688846:174_cdna 441^697 1 EMBV3_14451 GeneID:507152 7 GENE LOC507152 NULL similar to Uncharacterized protein C19orf39 homolog EMBV3_27697 TGCCCATGACACAGTAGTGGAAACTAAGCAAGAAAGACTGGCTCAGGGAAAACCAGTGGG Gene GeneID:505226|MGC134574:NM_001075195:118_cdna Constitutive 0 NULL GeneID:505226 4 GENE MGC134574 NULL hypothetical LOC505226 EMBV3_01081 TCCAGAAGCACATCCTCTGACTTCACTGCTGGAGCTTTTTCCACACTGGTGCATGACTGA Gene BVV0102_141212 + 0 NULL GK000015.2:31613655-31801642 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058821 TCONS_00058818 TCONS_00058822 1 XLOC_036204 Coding TCONS_00058818 XLOC_036204 Coding Coding ARHGEF12 15:31449692-31650791 j TSS44232 8585 1 TCONS_00058818_4 1441 42 0.957518224945052 4.56482905187523e-05 0.000631176295809324 0.0017944291138512 0.000633389796845733 0.00110738948710714 0.000570201868974828 0.000602604401341821 0.00187070163830444 0.0027876826203106 0.00023404103722706 0.000151392227155542 0.000164185075976381 9.65959558543e-05 3.21726695854879e-05 0.00100185533886019 0.00260450079013901 0.000996656451082029 0.0009540494141768 0.00163490168965038 0.00235083866261086 0.000937640472568952 0.00222534363573109 0.000614063429283384 0.00150319183460486 0.00210401660252021 0.000453602979109849 6.58542669393826e-05 0.000361847211683665 4.68343113068604e-05 0.000402695807564193 NM_001123033.1 ARHGEF12 Bos taurus Rho guanine nucleotide exchange factor (GEF) 12 (ARHGEF12), mRNA. 0.0 8964 98.75 0.588118811881188 NM_001198665.1 ARHGEF12 Homo sapiens Rho guanine nucleotide exchange factor (GEF) 12 (ARHGEF12), transcript variant 2, mRNA. 0.0 8033 88.81 0.724053581828771 TCONS_00058818_4 sp|Q9NZN5|ARHGC_HUMAN ARHGC_HUMAN Rho guanine nucleotide exchange factor 12; 0.0 2648 91.95 0.999306037473976 2 coding 0 0 0 0 -0.0418550782024091 0.73624153385148 0.00876954877327066 0.856459754504088 AGAGCAGCGGGGTCCGGGCAGCCGGACCTGAGTTTGCTTCCATTCGCCAAAAACAGTCTGTGCGTGTTATCAGAAAAGAACAAGTATGCTCCCTTAAGGAATACAAGTTTCTAGGACAAGGGGGTTTCCCCTCAAAAAACCTATAAGGCATGGAAGTATTTTGAACCGAGAGTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCAGTACATCACATGATTTTGACCCCACAGGTCTTGTTCAGCGTTGTGTGATCATCCAGAAGGATGACAATGGATTTGGGCTGACGGTCAGTGGAGACAATCCAGTGTTCGTACAGTCTGTCAAAGAAGATGGAGCAGCCATGCGGGCTGGAGTACAGACAGGTGATCGAATCATCAAGGTGAATGGAACTCTGGTGACTCATTCAAACCATTTGGAAGTGGTGAAGCTAATCAAATCTGGTTCCTATGTAGCTCTCACTGTTCAGGGACGCCCCCCTGGGTCGCCCCAGATTCCACTTGCTGATTCTGAAGTAGAGCCATCGGTCACTGGACATATGTCTCCCATCATGACATCCCCCCATTCACCTGGTGCATCTGGGAATATGGAGAGAATTACTAGTCCTGTGCTCATGGGGGAAGAAAACAATGTGGTTCATAACCAGAAAGTAGAAATTCTGAGAAAAATGTTACAGAAAGAACAGGAACGGCTTCAGCTATTGCAGGAAGACTACAACCGAACACCTGCTCAGAGATTGCTAAAAGAGATCCAAGAGGCCAAGAAACACATTCCTCAGCTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTGCTCAGGATGGAGCTGTAGTTACATCCTCCAAGCCGCTAGCTGACGGGCTAGCAGTGGGTGAAGGAGAAGCAGATCCTGGTGATGGGCTAGGCAGACTTGACTGTGGCAGCGGAGATGCTTCTCGGCCCGGTAGTGACAGTGCTGATAGTCCCAAGAGTGGCTTGAAAGAGAGGATTTATCTAGAGGAAAACCCAGAAAAAAGTGAAGCAATTCAGGACACTGACACTCAGTCGCTTGTTGGGAGTCCCTCTACCCGTGTGGCACCTCATATTATTGGAGCAGAAGACGATGACTTTGGTAGTGAACATGAACAGATCAATGGGCAGTGCAGCTGTTTTCAGAGCATTGAACTGCTAAAATCTCGCCCTGCTCACTTGGCTGTCTTCTTACACCATGTAGTTTCCCAGTTTGACCCTGCAACATTGCTCTGTTATCTCTATTCAGACCTATATAAACAGACCAATTCCAAGGAGACCCGTCGTGTCTTCCTTGAGTTCCATCAGTTCTTCCTGGATCGATCTGCTCACCTGAAGGTTTCTGTTCCTGAGGAAATATCAGTAGATCTAGAAAAAAGACGACCAGAGCTTATTCCTGAGGATCTACATCGCCACTATATCCAGACTATGCAAGAAAGAGTCCACCCAGAAGTTCAGAGGCACTTGGAAGATTTTCGGCAGAAGCGCAGCATGGGGCTGACCCTGGCTGAAAGTGAACTGACTAAACTTGATGTAGAGCGAGACAAGGACCGGTTAACTTTGGAGAAGGAACGGGCATGTGCAGAACAGATTGTTGCCAAAATTGAAGAAGTGTTGATGACTGCCCAGGCTGTAGAAGAAGAAAAGAGTTCGACAATGCAGTATGTTATTCTCATGTACATGAAACATTTGGGAGTAAAAGTGAAAGAACCTCGAAATTTGGAGCACAAGCGAGGTCGGATTGGATTCCTTCCAAAAATCAAGCAAAGTATGAAGAAAGATAGAGAAGGCGAAGAAAAGGGGAAGCGAAGAGGATTCACCAGCATCTTGGGACCCCCTAGGAGACCAAGCCGCCATGATAACAGCGCAATTGGCAGAGCCATGGAACTGCAGAAGCAGCGCCACCCTAAGCACTTGTCCACACCCTCATCTGTGAGTCCTGAGCCTCAGGATTCTGCGAAGCTGCGCCAGAGTGGGTCAGCAAGTGAAGGAGCAGACACTGGATACCTGCCAGCCAATTCCACGTCCTCCATGGTTGCAGGGGCCACTCTTTCCCAGGAAGGAGGGAAAGAGAATGATATGGGATCAAAACAAGCTGGAGAAACGCCAGCATCTGGAGACTCCTTGGATGGCACTCCTCGTACTCCCAACACCATCTTTGATTTCCCACCTCCTCCATTAGACCAGGTGCAGGAGGAAGAATGGGAAGTGGAGAGAGTGACTGAACATGGGACACCAAAGCCCTTTCGAAAGTTTGACAGCATAGCTTTTGGAGAAAGTCAGAGTGAGGATGAACAGTTTGAAAATGACTTAGAGACGGACCCACCCAACTGGCAACAGCTTGTCAGTCGAGAAGTGTTATTGGGACTAAAGCCTTGTGAGATCAAAAGACAGGAAGTAATTAATGAATTGTTCTACACTGAAAGAGCTCATGTTCGAACATTGAAGGTTCTAGATCAAGTGTTTTATCAGCGAGTGTCCAGAGAAGGAATTTTGTCACCTTCAGAACTACGGAAAATTTTTTCAAACTTAGAAGATATTCTTCAACTTCACATTGGATTGAATGAGCAAATGAAGGCTATTCGGAAGAGGAATGAGACCTCTGTTATTGATCAGATTGGGGAAGATTTGCTGATCTGGTTCAGTGGACCCGGGGAGGAAAAGTTGAAACATGCTGCTGCTACCTTTTGCAGTAACCAACCCTTTGCCCTGGAAATGATCAAGTCTCGCCAGAAAAAGGATTCTCGATTCCAGACTTTTGTGCAAGACGCTGAGAGTAATCCGCTGTGTCGTCGTTTGCAGCTAAAGGATATCATTCCCACTCAAATGCAGAGGCTTACTAAGTACCCTCTTCTCCTGGACAATATTGCCAAATACACAGAGTGGCCAACAGAAAGGGAGAAGGTGAAGAAAGCTGCAGATCACTGTCGTCAGATCTTAAATTATGTGAACCAGGCTGTTAAGGAGGCAGAGAACAAGCAGCGCTTGGAAGATTATCAGCGTCGCCTTGATACCTCTAATCTGAAGTTGTCAGAATACCCAAATGTTGAAGAGCTCAGGAATTTGGATTTAACAAAAAGGAAGATGATTCACGAAGGCCCATTGGTTTGGAAGGTGAATAGAGATAAAACAATTGATCTGTATACATTGCTGCTGGAAGATATTCTTGTATTGTTACAAAAGCAGGATGATAGACTGGTGTTAAGGTGTCACAGTAAGATTCTGGCATCTACAGCTGACAGCAAACACACATTTAGCCCCGTCATCAAGCTGAATACGGTGTTGGTTCGACAAGTGGCAACAGATAACAAAGCTTTATTCGTCATCTCCATGTCTGATAATGGAGCCCAAATTTATGAACTGGTGGCACAGACAGTTTCTGAAAAGACTGTCTGGCAGGACCTAATATGTCGGATGGCCGCATCCGTGAAGGAGCAGTCCACAAAGCCAATCCCACTGCCCCAGCCGCCACCGTGCGAAGGAGACAACGATGAAGAAGAACCTCCAAAATTAAAAGTGGAACATCATGACATTTCAGTCACTGGTCTGCAGAGTCCAGACAGAGATTTGGGATTAGAGTCTCCTTTAATGTCATCAAAACCTCAGTCTCATTCGCTGGGTACCTCTGGGAAGTCGGAAGTAGATGACCTCTTTGTGGCTGAGAGACAGTTTGCAAAGGAGCAGCATGCAGACGGGACACTAAAGGAAGTCGGAGTGAATTATCAAGTCACAATCCCAGATCCACACTTGCCTGGCTCAGAAGAACGGTGGGCCCTGGATGCACTAAGGAATTTGGGTTTGTTGAAGCAGCTGCTGGTACACCAGCTGGGCTTGACTGAGAAGAGCACTCAGGAAGACTGGCCACATTTTCCAAGATGCAGGACAGCCTCTCTGGGGGTGCAGGCAGACAGTGGAACCCAGAACCCTGAAAATATTAAGGCCTGTCATCCTGTTGAAGCACAGATGCCCTTTAGAACTGGAACTGGTGACATTTCAACTTGTTACAGTCCACGGACTTCAACTGAATCTTCTGCTCCACGGGATTCAGTAGTACTGGCATTCCAAGAGAGCCAGGCAAGTGACATTTTAATAATGGACCACATGATTATGACCCCAGAGATGCCTCCCTCAGAGCCAGAAGGGGGTCTTGATGAGAGTGGAGAGCACTTTTTTGATGCCCGTGAAGCACATAGTGATGATAATCCATCAGAAGGTGATGGAGCAGTTAAAAAGGAAGAGAAGGATGTTAATTTGCGCATCTCAGGAACCTATCTGATCCTTGATGGCTATGACCCGGTGCAGGAGAGCTCCACAGACGACGAGGTTGCTTCCTCGTTCCCCCTTCAGCCCGGGGCAGGCATCCCCTCTCTGGACTCTGGACACCAGCAGCAGCCTTCTCCCCAGAATGCTCATTCTGATGGGGCTGTTTCACCGTTCAACCCAGAATTACTGGTCCAGCAGCGCTGGGGAGCTATGGAGGATTCCTGTTTTGAGATCCAGAGTCCCTCTGCTTGTGCTGATTCACAAAGCCAGATCATGGAGTACATTCGTAAAATAGAGGCTGACCTTGAACACTTAAAGAAGGTGGAGGAAAGTTACACCATTCTTTGCCAAAGGCTGGCTGGATCAGCCCTCACAGACAAGCACTCAGATAAAAGTTAGAGCCACGTGTCCTGGAGGTGACTGCAGGTTGTTGGATTTGAGCACCAGCCTTGTCTCACCATGTCCTGGCTCCAGTGTGGACGCTGAGAGAGAGTGTGACGTGTGACGGAGGATCTGCCTGCAAACACCCTGGGGGAGCCATGCCCTCCGGGACCCAGAGCAGGACTGGGTCTTCACAGCCTGGCAGCTGCACAAGTCTGTCTGCGAGGGGACATCCGTCCTCTCGTCCTGCTCTTCTCACTCTCGGAAATCCATTTTGATTCAGAACAAAAACCAAATGTATAGAGCTTTGGGTGTAGAATATGAAATTTTACTTAGACTTAAGAGAAAGAGAAAATCAGATGTATTTATTTGACTTCATTCCGTATTTGAAAGCACATTTTAATTTTTATTTTGCCATGTTTTGTTTTAATTGAGTAGTGAGAGTTTTAGCCCTTTGTATTTAGTACACCCAAGGATTGACTGCTCCTGAAGCAAAGAGTTCAGGATGGGGTATCAGGAGGTGGCTGGAGAGGTGAAGAGGGGGAGGGAGTGGGCAGAGGAGGGAGGAGCATGAGGTCTCTACCGAATGATGTCCCGTGCCCTCTGCTGTCCCGGAGGCTGCTCGTCTGAGGGTCCCCTCAAAAGCGTACTCAAAAGTCCTCTGCTGCGACTCCTCCGAGCAGAGGACTTGAGCTTTGTGCTCCCAGGTGCGGGGCTTCCTCTCACCTGAGGCCAGCACCTCTTCTCTGTAGCTGGGATCTGCTCCCAATGAACAGGAATCCTCAATGTACTAAATAGCAGGCACTTGAAAATGGGTGTGTTTTCTTCTATCGTCTCCTTTTCTGTTGAGGGTTGGGATTTGGGAGGGAGAGGAAAGCAAATTTTATTTTCTTGACTATAAATTTGTTATCCTTGGTATTGTTTCATTTTTATAATTATACATTAGACCTTGGCACTTGTGTAAAATAATCCCTGCCAGCTGAGCAGGAAGCGAAAACAAGCAGAGATGCTTCAGGTGGTGGCAGGGGTGGGGGCTGCTGAGGAAGGGTGGGATGGGAGCGGGTGAGAGTGTGGGAAGGTTATGTAACTGAATCACTACTGAGTTGAACAATGGCTTTCATGAGCCACGGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAGGTTTGACTCTGATTTTTGCACTGATGGTGCCAAAGGGCTCTTAGAGTTTGAGAAGAGAGCCAAGGGTGGAGTGGAGAAGGATGCGGTGGAGAAGGCAGAGCTGCTCCAGCCAGCTCCAGAAGCACATCCTCTGACTTCACTGCTGGAGCTTTTTCCACACTGGTGCATGACTGACCTTAAAAATTGCAGACCAGAACATACACTGGATACTGCAGGCAAGGCGTTGGGAACTGCCTGCTCTAGAATGAATAGTAGCCCTGGCAGCACCCTCCAGAGGATACATGTTTCAGAACTGCAACTTGAGAACTCCCTTCAGTTCTGTTGGCTTTCTGTGGTTTTCTTTGTGCATCAGGTATATATTAATGTGTTTTGAAGTATTTTTGCCAATCAAAAATGAAATCATTTGTCAAATATTACAATTCTGTTAATACACAAGGAGTTGATTCACTGCTCATGTCTTTCAGTAGTACCCTCTGAACTCTGTGGGTAGTTAAGATGTAATTTTGCTCTCCCTGCCATCCGCTCACCATCTGCCCAAAAAAATATATATATATACATTATATATATATAATATATATATAAAATTTCCCCCCATCATAAGTGGTAAGGATTCCCAACTGTGTTTATAAACACCACTACAACTTAGCAAAGCTCATCTATGTCCAGATTCTTGTTTCTGTCTTTCCAAAAGTGATCTGTGTTTTTAAATAGACCAACTTGGATCGTTGGACCTCATCTATAAATTAGAATTTTATTTTGATTTATAGCCCAAGTATAAATTAAAATGGGATTAAAAAATTTAGAAGCAGAATCTAATATATAAGTAAAGCTTGGGACTTGAACTTTCTGTATCTCTTAAGAGAAACAAGTAGAAACCAAATGGTTACATTGTGCTGCTGGAAATAATGTAGTCACTCCCAACTAAAAGGGGTACCTGTAGTTACTTGACACTAATACCATCAGTGGGCAGTTAATCAGAAGAAAGGTAAATACAAATAGAACTTTCATCTTAACTTCAGATAGTACAGGGTCATTGAATAATTCCCTAGCACTCATTTATTTAAGAAGATTTGTACGTTAGCAGAGTTTTAGTTTCTCTTCTGGTTCAGCCAACCCCTTGTCCTTAGCAACTGTTTGCTTTTCCTTTTCCTGAAGTTTAACCTCTCCTTGGAACAAAAACAGGGCTAACTGGAAAAATATTTTGACTGTTGCTCTAGTACCTCCAAATAAATTCGTATCTAGATCTTCAAATGAAGCCCCCAAGTGAAGTCTAATTCTGAAAAGATTCCACGATTTTGAGTTTTCTTTTCTATCTCACCAGCCTCATGTCTTCCTCCTCCTCCTCATCCTGGCCTCCCATGCTCTCCTTTTATTTTTATTTTTTCCCTTTTGTCCATTATAATCACATCCATCCTACTTTGATACTATACCTGCCTTTCAGGACAATGGAATTAGGTAATCTCTTTTTGGGTGAGACTGATGACCATCAAAGCCGTTTTCTCCAAGTTGGTGACTGAAGTTGGAATCAACTTCCATGCGGAAAGATCCAAGGGCGGTGGACAGAGCCACCTTCCCAGAGCAGGAGAGCGGGTTTTAGCTATCGTGACCTGCCGTGACCCTGTGCTCTTTCCCGTGGCCGTAAGGGATCCCTTGCTATTAAGTGGCAGATTACATTTGAGGTGTCTCTTTCCTTTTCAGAGAACAAAGTTCAGCAAGGCAAATCAATAAACCCCAAAGTGCTGTAATTTAAAATCATGATCACTGCCCTAGAAGTCATATATTTCGTGTACTTTAAAACCAGCTATGAATAACTTGGACTGCTTGGGTTATCTTTGGCTATTAGGACGTGAACTGTAACTATTTATTATAATATGCTACAAAAAAGGTGCTTTTTTGCTTTCTTTTCCCTGAAACAACTTTGATCGACCGTTAGAAAGGATGAGTCCCTCTCAAAAAATTTTTTTGTTAATTTGTCCTTGGAGGAGGGTGGGGAGCCAGTGTGATAGTAAAGGAGAAAAGCCCACTGTTCCCTTATTTTTGAAGCTAAAGAAAACAATTATGCCTACTGTGAGTTGTCTTTTGCTCGCATACTTTTTTCTTTTTGGTATCATTAAATTCAGTGTATTATGTGGAGCTTCTGTATTTCAAACTGGAAGTCTTCTTTGAAGGTGGTATATGATGTAATTTTGAGCTACAAGAGCTTTGGTCAGTCTTTCCTCCCCTATATATCACAGGGGGCAAGGTTCAAAACTGTGTTCAGAGGACCTCAAGATAGAAAATTAAGCAGGACCTTCCAGTCATCTTTCTGCTGGCTAACTTTTTATTCCCTAGAATTACAATTCCTCTTTTAAATCTTTTTTTTTCTTTTTTCTCTGACTCCTCCACCACTTTTCAAAGTGATCTGCGTAATTATTCTTTCCTCAAGAAAAGAGTTCCTTTGCCTTGTTCTTCTCCACTGGTACTGATGGTTTTGAAAATAAACTGGTAGGAAAAAAAAGTGTACCTCCTAGAAGGAAGCCCTGCCCGCCATTTCCAGGTGCCAATGGCTAAGCAGGTGTGCCACAAACATAACTGTAACTTGTGCACACTGTGGGTCACTCTTAATCAGCCTCTTCCTACTAGAGCATTTTATTTTCCTTGTTCACCGTACAATCATGTACTACTCTTTAACAGAAATTACTTTTAAAGAAATCTGGAACTATCTTAAAAACTGGAATTAAACTTTGATTGACATGTATCACATATTCAGAGGCTTGTGATGT EMBV3_09052 CACCGTCTTCTGGAACAGTTCAAACCCCAACCAAGCCCATCCACCACCAGGAAGACCGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16074 CTGGCTCACTTTGCCTCTTTGGCCTGCACCACAGGGTCTTCAGTCCACGTCTTCGTCAAT Gene GeneID:614914|LOC614914:XM_002693514:250_cdna Constitutive 0 NULL GeneID:614914 15 GENE LOC614914 NULL hypothetical LOC614914 EMBV3_40423 CTCCCAGATTTCCTCTGGCTGCTCATTTTGACTTGCCTGGGCTCACAGTCCATATTCTGT Gene BVV0102_221972 - 1 EMBV3_00670 GK000014.2:79733783-79754127 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053988 TCONS_00053987 TCONS_00053990 TCONS_00053989 1 XLOC_031878 Coding TCONS_00053987 XLOC_031878 NonCoding Coding - 14:79751521-79753357 - TSS39715 686 2 TCONS_00053987_2 89 0.578717201166181 2 0.62724795640327 6.32534387340927e-06 4.30997138208015e-11 5.93767834968928e-06 3.13978680958944e-09 0 5.21429397957077e-06 0 3.70155814499034e-05 5.33131815246286e-09 3.72712901466034e-17 0 0 7.2033622533361e-05 0.000104069651999752 0.000251544995761479 0 0 0 4.12047034386855e-05 0 0 0.00042811503576841 0 0 4.10551868332724e-05 0 0.000149702996918801 5.01660604292793e-05 3.35313703293516e-17 6.10201699382284e-08 XR_227355.1 LOC101903470 PREDICTED: Bos taurus uncharacterized LOC101903470 (LOC101903470), 5e-53 212 79.30 0.362973760932945 0 noncoding 0 0 0 0 -0.371223068218788 0.306988870310118 0.0198377175488171 0.750044735476884 GGGCGGCGCAGAGCGCCTAGGGGCTGAGCGGATCCAGGGCTAGCGCTGGGACTTCTAGGGGAGGACTGTAATGAGACGGAGCTGAAGTGCTTTCCTCAGTCAGATGAGAACTTCTGACAGCGCGGCAGACGCACAGCAAAGTAAACAAGCCGCGCAGCAAGAATGAAGTGAGAGCCGCCCCGTCGTGTCCGTGGGATTCTCCAGGCCGGAACACTGGAGTGGATATTTCCCTCTCCAGTACTGAAAGCTACCCTTCAATGAAATATGCGTTTCTTCGTCTATATGAGGCAGGAAGCAGATGGGCCCCCCAGGGTAAAGCGACCAAAGGGAAGAGATTGGACCCTGCACAGACCACATATTTCTCGTCCCAAAGTCAGGAGACCCTCCCTGGCTGCATATGCACAAAAGAGGCTCCTTTGCTGTTCTACCCAGATGCCTTTTCGGTGGAATTCATCTTGGCTAAGATGCGTGCACACGCGGGAAGATCCTGAGATATACAGAATATGGACTGTGAGCCCAGGCAAGTCAAAATGAGCAGCCAGAGGAAATCTGGAAGAAATGCCCCACATAAGTGATTTAAACTGCCACCAGGGCGCAACTCGGGGCCTCTGTCTCTGAGTCTGCCCATGTGTCTATCCATACGTACTGTACTTTTCCTCCTAATAAATACTGTACTTGCTTCACCA TCONS_00052393 r 5' 2195 TCONS_00052393 r 5' 770 EMBV3_42606 TCTGAACAGCCCCTTCAGAACTACCTGGATCCAACCACAACCGCTTCAACCCTCAAGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15619 AGGACAGCAATGGCTGTATCAACTATGAAGAGCTCGTCCGCATGGTGCTGAATGGCTGAG Variant GeneID:281341|MYL6:NM_175780:893_cdna 458^502 10 EMBV3_17370 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_03366 GTTTTACATATCTAAACCCCATTTTTCAACTCTCAGTTCCTCTCCCATTTACAGTAAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13039 GGGTGGACATTTGTTTTCAATTCTCTTGCATATACTTGGAGTGGGATTGCTGGGTCATGG Gene GeneID:618521|ADAT1:NM_001081620:124_cdna Constitutive 0 NULL GeneID:618521 18 GENE ADAT1 MGC142609 adenosine deaminase, tRNA-specific 1 EMBV3_21542 ACATTGATGACCTTAAGAAATTTCTAAAGCAGCGAAAGCACAGCATTTCTATCAACTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31638 ATTCCCAGAGCGTGGTGCTCTCTTCCCTGCCTTGGTCTCACATTGCGGGGCCGAGCTGGT Gene BVT0102_137729 + 1 EMBV3_15773 GK000005.2:119859395-119874458 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15759 AGAGCCTAGCAAGCGGGCGATTTCCCGGGCCCGCCCCCTTCGGTTCTCGAAAGCTAAAGT Gene BVT0102_442519 + 0 NULL GK000025.2:21476026-21476412 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144751 TCONS_00144750 TCONS_00144749 1 XLOC_088638 Coding TCONS_00144751 XLOC_088638 Coding Coding UBFD1 25:21476204-21493391 j TSS108614 5962 1 TCONS_00144751_3 283 8 0.653555219364599 0.0127301242294372 0.00625681157946096 0.00970557196301463 0.00515859088687895 0.00518930812159908 0.00314340440551889 0.00586717025584588 0.00698568395390438 0.00904411837470507 0.00139624536096078 9.29060566796813e-05 0.000336136659646811 0.00205024539489838 0.0022294028772992 0.00199516626659737 3.06763734486854e-09 1.01478729396299e-17 1.01687476626172e-08 0.00183429947529304 0.00333284163896004 0.000961886383887251 7.40932154202322e-05 0.000219416963325259 6.20712524532505e-13 0.00255179868003634 0.00160173493430692 0.0012562057489977 0.000184411860670679 8.04854346028494e-05 6.48156402319075e-18 NM_001105501.2 UBFD1 Bos taurus ubiquitin family domain containing 1 (UBFD1), mRNA. 0.0 1090 100.00 0.101140556860114 NM_019116.2 UBFD1 Homo sapiens ubiquitin family domain containing 1 (UBFD1), mRNA. 0.0 2176 79.90 0.406071787990607 TCONS_00144751_3 sp|Q78JW9|UBFD1_MOUSE UBFD1_MOUSE Ubiquitin domain-containing protein UBFD1; 0.0 530 89.32 0.996466431095406 2 coding 0 0 1 1 0.065738613589601 0.587112300754178 -1.77970824156362 0.00018872809389952 CCTAGCAAGCGGGCGATTTCCCGGGCCCGCCCCCTTCGGTTCTCGAAAGCTAAAGCGTGGCAGGGGCCGGGCCGGGGAAGCGGAGGAGGCGGGTCTCCATAGAAACCTCCACCTGTTTCCGGCCAGGCTGTGCAAGATTAGGGGCTGCTGCGGGGGCCAATCTCAGCCAGCTCGCCTTTTCCCGGCGGCCTCTGCGGGAGCGGTGGGTGTTGTACACAATCATCATGGCGGCGGCCGGAGCCCCGGATGGCATGGAGGAGCCTGGCATGGACACGGAGGCCGAGACCGAGGCGCCCGCGCGGTCCCTCAACTGCGTGGAGGCCGAAGCCGCGGCGGGGGCGGCGGCCGAGGACTCCTGCGCAGCGCGAGGCAACCTGCAGCCGGCCCCGGCCCAGCCCCCTGGGGACCCCGCGGCCCAGGCCTCGGTCAGCAACGGCGAGGACGCGGGCGGCGGCGCGGGCAGGGAGCTGGTGGACCTGAAGATCATCTGGAACAAGACTAAGCACGACGTCAAGTTTCCCCTGGACAGCACGGGCTCCGAGCTGAAACAGAAGATTCATTCTATTACAGGTCTCCCGCCTGCCATGCAGAAAGTCATGTATAAGGGACTTGTCCCTGAGGATAAGACATTGAGAGAAATAAAAGTGACCAGCGGGGCCAAGATCATGGTGGTTGGCTCCACGATAAATGATGTTTTAGCAGTAAACACACCCAAAGATGCTGCCCAGCAGGACGCAAAGGCCGAAGAGAACAAGAAGGAGCCCCTCTGCAGGCAGAAACAACACAGGAAAGTGTTGGATAAAGGGAAACCTAACAAGTCTGGAGGAAAAGTGAGGCTTACCTTTAAGCTAGAACAAGACCAGCTGTGGATCGGCACTCAAGAGCGGACTGAGAAACTGCCCATGGGTTCCATTAAAAACGTGGTCAGCGAGCCCATCGAAGGGCACGAGGACTATCACATGATGGCGTTTCAGTTGGGCCCCACGGAAGCCTCTTACTACTGGGTGTACTGGGTTCCAACTCAATATGTGGATGCAATCAAAGACACTGTGCTGGGGAAATGGCAGTATTTTTGAAAGCACTTTCACCTCTGGCCCAGGAGACTGACCCAAAGTGAAGGACATTGCTGGGAGAGGCCTGCAGCATCCCTGGATTTCAGAGTTCTGGAACTTTGTTCAAAAATATCTATATCCAATCTGAGGTGATGTGGTGACTGAAGCCAGAGGTGATGTACTTTCACCATTAGCTTAATTTTAACTTAAAATCACCGGTTCCCTTTCTTGCAGTCAGCTTCATACCATTTTTAAAAGTCAATACGGTGGAAATCAATAAATCTGAATTCTGAACATGTTGTGTGGAATACTCTTAAGTGTGTTTGAGAGTAGATCTACCAATTGTGTTTAGAAAGGAATGATCAAAAGCTTTCTGATTCTTTGGTTGTTGTTTGTTTTTAAGTGATTTCACCTGAAATATTTTCATAACTCTTTGGTTGCAAACATTTGGACTGCATTGTGATGAGTTGGGGGTGGGTTTTTTTTTTTCCTTTTTCATATAAAATTGTATGCAAAATGTGGGGGTTAGTAAGCCATATTTCTCTGTCCACTGGTTCAGAATGAATTCTTTCCCTTCTTATTTTCTCACTTCCTAGATGGGAATTTTTGTTTCTGAAAACCCAAAGATGTCAGTTCCTCCTTTTGTACCTCATCACCACTTCCTTGCCTGGCCTCCCTCCCGCCACGCTGCTGCTCGTGAATGCATGGCAGGAGAGGAAGAGCCAGGGGTCTGGTCGGGGCGCTCACAGGGCTCTGGTGTGTGCTGAGCAGCGGAGTGTGTCCCAGCGACTCCGGTCTGACCGTCTTGCCCTTTGGGCCCCGATCTCTGGGGAGATGGCACTGCCGCTTTGACAGTTGCCTACAGCCCTCGCTGATTGGGCTTTGAGGCCCAGCCTGGCATGGGTGTGCCGACAGAGGCCCCTCTGAGAGGAGCCAGGTGGAAGCCAGTTATACAGCCATACAGCCACAGACCCAGATCCTTCCTCCTTTCTTTAGAAGTTTTGAGAAACCCTTCAGCAGTCCAATGATTCTTTCAGTGACGTGTCTGCATCTGGTCCTTCTGCTCATGCATTACGTTCAAGTGTCCTTCATCCCAGGTTTAGAGATGCTGCCTTTCTCAAGAAGAAGTCATCTGACCTAGTGGGTTGGCCGATGTATTTCAACATCGAAAATGGGATAAACAGCTTTTGTGATTAGCTCTCCCTCTTCCGGGTTTAGCCCTTACCGTCCTCTGTCCACGTGAAGTTCTGTCGTCTCCCAGTGGTTTGGTTGACTCTGGAACGAGGGACGGTCTCTTGGTGAATGATACCCTTTGTGCTGTTTGCTGTTGCTCTGCTGCTGTCTTTGCGATTCTCCTCTCACTGGTGCAGGCCCTCATAGTAAGGTTTGGCAAGAGATGTCCCAAATGTCACATTCTGGATTCTAGACTGTTAGCCTTCTTTCTGTGAAACGTATTAGCATGTGTTCGCCTAAGATGACTATTCCTTGTGAGCCAGTTCATGGTGATCGTCCGCGCCCTTCCCCTTCTAAGCCGTAGTTCAAGAATCCAGCCCATCCAGACCAACTCTTGCTTTTCGTGGTGTTGTCCATGCCAGGTTACGGATCTAGGCAGGAAACTCCTCTTGCTTTTCTGGGGGGTACAAGTTCGTCTGGGAAGTGTAGCATCCAGGAGATGGCCTGTTTTCCACCCCTTGCAAAAGGCGCAGTACCTGTAGCTCTTCTGTCCTTGTCAGCCCACAGTCCTTGGAGGAAAGAGCATGTCTTTGCTGCTCGTGGAAGCCTTGCTCTGCAGTTGACAGGCCTCGCGTGCTCACAGAGTGGCGGCGCGGTTTGAATGCTGCTCTTTCTGTTGGCCAGCCTGCCTGTCCCAGAGGCTTGTCCAGACAGTGCCACACGCCCGCTCTTGAAGCAGGCATCCTGTCCCCGTTTTGTGGGGCTGCTCCCCAAGGCCCTTCCCACCAGGTTCCCCCTTCGCCCTGCTCGGGCGGCTGCCCCCCGCCCACCCCTGCCACCTGATGCCCCTTCCTCCCAGTGACAGCGTGCGTACCGACTCCCTGCTCCCCAAGGGCCAAACCGCTTCTCGCTCAGGCCGGTGTCGTCTCAAAACAGGACCAAAGCCTGTGTGAGCCTTTTTATTTGAAGTAAAAATGGTGCTTTTTTCCTTACTTGGAGATCTTCTATAGTGTTCATTCTCCCTCAGGCTTCTCTCCACGCGGAGTCCTCGCTGGGGAGGGGGCAGGACCCCTCGCGGGGCTCTGAGGGTGGACGGGGGTGAGGCTGCCTTCTCTCGTGGAGCTGGCAGCCCTTTCGCAGGACAACAAGCCTTTCCTTCCCTCCCCTCCGCCACTTGGCAGACTAGTGACGAGGTATCCCTGCTCTCAGCTCTGTTTCAGTCAGCCTTTTCAGAAAACTGAGAGAGATGGTCTCGAGACTTGCTCCGACTCTTTGGTATTCAGTATTCAACTATTTGGTATTGTTTTAATCGATGATGGGCCTTTTGCAAGTAGCGTCAGCTCTTTTTAAAAAGAAAGTCAAGCTGAGCTAAGGGTGCACTTTGCTGTATTGCAGACATGGTGGGCCAGGTGAGGCCTCTGTAGGCTCCTGCTTTCCATGACGAGGGCCAGGGAGACGCCCTTCGCCACTCAGTTGCTGGATCTCAGCTGGAAGGGGCTGCCTTGCTTCTTCCTCTCCCTTTCACCAGGTGCCTGGAGGAACGGTCCCGGGCACTCACACTTGGCCCGCCCTCTTTGCCAGAGGCAGGACCCTGTGTGCCAAGGGTGGCTTGCTTTCCACCCTGTCCTCTGAGGGCGCTTCTTTCTCTCCTGGCCTGTTGTCTTGGGAAGGATAGTCCTTTTGTCTTCAGGCTTTGTGATCAAGTCATCTCCAGTTAGGACTGGCACCTGTTCCCTTCTTCGCGGGGCCTGGTGGCCTTTCTGAAGTCGCAGGTGGTCAGGAGCCCTCCAGTGTGTGTCACATCTGGTCAGTTGACCTGCCAGGCTGGGTGGTTCTACTGCTTTCTGAATTTCTAAGAATCTCTTTTTCTTTCCTAACGAGTTCTGCTGATTTATTTGACAATGTACGTAAGTACCCTGTTCTCCTTGTGGTGTACGCTCTGTTCTGGTTTTTGTTTTTAATCAAATGCCTGTTTGGGAGGAGATGAACGTATTTAGTCTATTAGATTTGCGCTGCTGGAAAATTTTTTTTTTTAAAGTGTAACCTTGACTAGCTGTCTTATTATTGTTTATCCTGTAAGATTAGTCTATCAATTAAAGTTTGATAATTAATTGCGGCTCCTTTTCCTTCCAGTTCTTCATGCGCCTGGTCTGTACTGGGGGTTGACAAACATTGAAACTGGGCCCAGAGTTACTTTTGTCCAGTTGTGGGGTACCATGTTACCATCTTCCTTGTTTGGCTTTTAGGTATAGCCACATTTGTTCCTGCTGAAAATAGCTGATAAAGGGATCTGACTTGATGCGCTCCATGTGAGTCCAGCTCCCAGCTTGGCGGACAGCCATGTCCCTGTCAGGGCCTTCCTCCTCTGCCCGGCCCCCAGGGGCTGGAGGGCAGGCCGTCATGCAGTCCTCACTCTTCTAGGACACGTTTGATCAAACACTGAGATGGAGATGCAGCTTCAGCCGCAGCCACAAAGACCCAGGAGGAAGGAGGGAGGTCCGTTACCAACAGCGGGATGAATGCAGAGATCTGGGCATGGGCAGTGACTGTAGTTGGCAGAACTGGTTTTGACCCAGCACTGCTCCCACTGGACCCTCTCTCCTCTTCGCCCTACTTGGTAAATGTTCCTGAAGGTTCTGGTCTCACTGCCCCTTCCTGGCTCTTTGTAGTTTCCCATTGCCTCATAATCCTTGAACCACACCGTTAGATTCTTAAGGTTTTGACTGATATGGGGGTGGGGGCTGTGCTCCATGCTGTATGTGGCCTGATGCCCCTGGGGAATCTTCTGTCTGCATAAAGGGCACTTCTGAACTGTTATTGGAGGCACCTTAAACCGGGTAGGGTGATGGAGCCTCCTCAGACGGAGAATGAGATGAACTCCACTCTGAATATCGTACCATATTTTGGGGGGAGACACCTTGGCATTTTCTCAGCTGTGGGTAACTCAGAACACTCGACAGCAGGGACCCCACAAAACACTGTCATAAGGGCAAGAGGCGAGGACTTTTTCCTGCTCTTGCCCGAAGCGGTCTGTTTAACTCATCCTGGTTGTAGGAGGTTGCTGTGCTTCCCACCCAGGAGGCCTCTGCCGACACCACTGGGCTGTTTTCAGCTGGGATTAACCTCTGCCTTTTCCAGTTTCTCGAGGCTATTTTTGTTCTGAAGCCTTATTAGCCTGTCTTATTCTACTGATAGACCCCTCCTTACTCTTCACCTCATTTTATAACTCCTGACTTTCAAGTTTCTATTTCTCACTTTCCTCTCTCATTGTAATCACTTGCTGTCTTCCCTTTTTTGTACATTTTCAAACCTACAGAAAGTTGAAAAATGCTAGTGACCACGTCATGCATTCACCTGGGTTCACCAGTTGTTAAAACGTTAACTCCATCTGCCTTCTCTTCACATGCATACTTTATTTTGCTGAATCATTTGACTGCCTTACAGATGCCATGACATGTTTCGTGTGGACACGTAAGCAGCATCTCCAAAGAGTAAGGCCATTATTACACCTTAGCACGACACGGGTACCTCACCTAAGAAAACGAATGTCAATTCAGTAATATTACCTAATATATAGATGATGTGAAATTAGTAATACTAGTTAATACATCTTCTAGAATGGTTCTTCCCAATCAGTAATTCTTAATGTTTCTGAGTCCTGTATTTTTTTAAAAATATCCTTTTAACTTTGTCATTGCTAGCCTTGCTCTCCCTTTAAAGAAACCTCCCCTCCGTGT EMBV3_31141 TAAACTATGTGGAAAGAAAGGTCTCCTATAGTGCTAGTTCTGCTGGGCTTCCTCAAACCC Gene BVV0102_105720 - 1 EMBV3_33157 GK000002.2:119991388-119999139 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111936 1 XLOC_067835 NonCoding TCONS_00111936 XLOC_067835 NonCoding NonCoding - 2:119994327-119995711 - TSS83557 1384 1 TCONS_00111936_1 90 0.383670520231214 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000896928265369511 0.000443847805000494 0.000253809842550799 0 0 0 0 0.000232002603572534 2.4226364309937e-05 0 0 0 6.94016209683777e-06 0 0 XM_005225612.1 GSTO2 PREDICTED: Bos taurus glutathione S-transferase omega 2 (GSTO2), 1e-39 168 77.09 0.16257225433526 0 noncoding 0 0 0 0 0.0961740073262262 0.580708916500549 0.00925212978027637 0.844435074223138 CCTTAATTGTCTGGAACCTCAAGGGCTTCCTTAGTCCTGAGTGTGTGTCCAGGAAAAAAGTCTGAGCCGCCCTCTGCAGCTGCTGCCTCTCATCCCACACGGTGACACCCTGGCCCATAGGCCCCCACAGTCCTGTGGACTCTGAGGCACAGTCTTCCTGACAGAGGCTGTAGCGGGCCCCACGATTCAGAGACAGAATGATTCTCTTAGTCACCCTCGCTTGCTCTTCTCCAAAGAGCAGAAGCAGCCAGCTAGGAGCGCTGGGTCCTGAGACTCCCAGTCAGTGACACAGAGTTTGGGGGGACCCTACAAATTCACTCAGGTTCTGTCACTGGGAAGCAACTTTCCAGGGCTGCTGGTAAATTTTAGATAAATTTTAGTCAGTCTCAATCAAATCCTGGGGAACAGGTTGGGGGGAAGGGGAAGTAGGTCTCAAACGCTTTCCTCCCCAAAGACCCCCAGCTTGAAAGGCAAGACGCTTCCCCCCTGCTTTCCTGCCTCCAGTCCTGCATTCCTAAGGGGTCTGCGGAAGAGGTGGCTTTGTCAGGCCACAGAAGGTCTCCTGCCAGGCAATGGGTGCTGCTTGGCCACATTTACATAACTAAAGGAGACCACTCAAAGAACTCTACCCTTAACAAAGAAAGCCTGTTCTGGGGAGACTCGCTCTGTCCACCTCAGCAGGGAGGGAAGCTTCTGTGGAACCGGTTATAGACGAAGACGACTGTCAAGTGAAGAAACGGAGGCTCCCGAGAGTAGGGTCCCATGGCACTTGTGTGACCAAGCACTGTCTGAACGCAGTCTCTGCACCTAACCCCCCACCCTTTTGTCTCCCAGGAACCTCCATGTGTATTTGTGGGGTTTTGCCTGACAGTCCCCAAAGTAGAAAAATGTAGTGTCCCGTGAGTGACTGGAAACTGGGTATTTGGGGTTTGAGGAAGCCCAGCAGAACTAGCACTATAGGAGACCTTTCTTTCCACATAGTTTAAAAAAATATTGTGAAGACGAGCTTCTCTGTTTAGTGGAACACTATACATTGTTTAATACACAACCCCCAAGCTGTCTGCTTCTAGCCCAGTTCATGGTCTTGGAGCTATTCTGCACCTTTTTTAAAACCACAGAAAACAGGGGAGGGATAAATTGGGAGTTTTGGATTCATATACACACACTACTATATATAAAAAAGATAAACAACAAGCACCTACTATATAGCACAGGGAAGTATATTCAATATCTTGCAATAATCAATAATGGAAAAGAATCTGAAAGAGAAGATTTATATTCAAAACTAAATCACTCGACTGTACACCTAAAACTAACACAGCTTTGTAAATCAACTGTACTTCAATTTTAAATTTTTCTAAAATAAAAAATTTTTAAGAAATAT TCONS_00103530 . 3' 3459 TCONS_00103530 . 3' 4842 EMBV3_19590 AGCTTGAGGCAACCAGGCAGGAGCCAATCAAGCATGAGGCAACCAAGTGTGACTTCTTTT Gene GeneID:520807|SATL1:XM_002699949:37_cdna Constitutive 0 NULL GeneID:520807 X GENE SATL1 NULL spermidine/spermine N1-acetyl transferase-like 1 EMBV3_39030 ACTCACCTGGATGTGGTTTTCTGTGTGATCTCAAATCTTTGAGTACTGAATGTCCATGAC Gene GeneID:785165|MGC157332:NM_001102336:19_cdna UTR3_Alt 2 NULL GeneID:785165 29 GENE MGC157332 NULL hypothetical protein LOC785165 EMBV3_39891 AACTGGAAGCCAGCTGTTAACCAGACGGGCCAGCAATAGGTTCTGATGTATTACCTGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08084 TGGCCCGTGTGTCTCAGGCCACACTGAAAGCCTGTTCCCTATACCAGTTTCTCATCCACG Gene BVT0101_028750 - 1 EMBV3_39156 GK000014.2:2071926-2132703 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26730 GTGGTGACCCTAGTATCTTCTGTAGTCTGCCCTTGGGCTTTTTTATAGTGAGTAGCGTGG Gene GeneID:505987|GK:NM_001075236:2_cdna Constitutive 0 NULL GeneID:505987 X GENE GK MGC142800 glycerol kinase EMBV3_11822 CAGACCTGAGAGATGTGAGCGCTGTTGCTGAGGAGTGACAAGTTGCTAATATGCAGAAGG Gene GeneID:512741|H3F3C:NM_001099370:29_cdna Constitutive 0 NULL GeneID:512741 14 GENE H3F3C NULL H3 histone, family 3C EMBV3_14136 GCACCAACACCCAGTTCGAGATGGTTCAAGAAAACCTGTCCAAAACCCACAGCTGCGACA Gene GeneID:539084|SLC5A11:NM_001034660:1_cdna Constitutive 0 NULL GeneID:539084 25 GENE SLC5A11 MGC128206 solute carrier family 5 (sodium/glucose cotransporter), member 11 EMBV3_26920 CAAGTTGGGAGCAATGGCTTTACTGCATGCCCCTGAAATGGCTGGAAGGGATATGATCTT Gene BVT0102_192427 + 0 NULL GK000005.2:25286218-25289256 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194213 TCONS_00194216 TCONS_00191113 TCONS_00191115 TCONS_00194215 TCONS_00194212 TCONS_00191116 TCONS_00194214 TCONS_00208986 TCONS_00194218 TCONS_00191114 TCONS_00194219 TCONS_00194217 3 XLOC_117692 XLOC_116812 XLOC_127497 Coding TCONS_00191114 XLOC_116812 Coding Coding METAP2 5:25255448-25289206 j TSS143267 4194 1 TCONS_00191114_3 225 0.028135431568908 6 0.875936842728915 0.00146783819926228 0.00037679014499113 0.00024084212646129 0.000880807170988848 3.19850551536679e-10 0.000152133705546115 0.000754064654425038 0.00110123619981904 0.00207121808202721 8.3465913668116e-09 2.21232471125755e-17 6.11081319768702e-05 6.37544938132562e-05 0.000176760578895895 0.000233913896448517 0.00193389236038081 8.08991554676461e-18 7.68092287673794e-08 0.00134646371222023 0.000968164512646195 0.000241682992208673 0.0006211852660203 1.07716857771699e-13 1.95863398922749e-10 0.000810096524506654 0.000767599366337687 0.00101235253374575 0.00033450975042078 0.000200064087548414 0.000233806414653225 XM_005206111.1 USP44 PREDICTED: Bos taurus ubiquitin specific peptidase 44 (USP44), 0.0 3963 100.00 0.523605150214592 NM_006838.3 METAP2 Homo sapiens methionyl aminopeptidase 2 (METAP2), mRNA. 0.0 1584 77.26 0.469003338102051 TCONS_00191114_3 sp|Q3ZC89|MAP2_BOVIN AMPM2_BOVIN Methionine aminopeptidase 2; 5e-89 275 99.45 0.804444444444444 0 coding 1 1 1 0 -0.774607769414805 0.0199338158624409 -0.114110437882305 0.102369972989425 CCCCGCGCCTCTACCATAGAGAGCAACTTCCGGCGTCGCTGGTGTAGGTGGGTGAAGAAGGAGCGGGCCCTCGCTCTTCTGTTTCAGTGCCTCGCGCTCTCTCGGGCAACATGGCGGGTGTGGAGGAGGCAGCGTCCTGCGGGAGCCACCTGAATGGCGACCTGGATCCAGACGAAAGAGAGGAGGGAGCTGCCTCTACGGCTGAGGAAGCGGCCAAGAAAAAAAAACGGAAGAAGAAGAAGAGTAAAGGGGCTGCCACAGGGCAACAGGAACCTGATAAAGAAGCAGGAGCCTCAGTTGATGAGGTGACAAGACAATTGGAAAGACAAGCATTGGAAGAGAAAGAAAAAGATGATGATGATGAAGATGGAGATGGTGACGGAGATGGAGCAACTGGAAAGAAGAAGAAAAAGAAGAAGAAGAAGAGAGGACCAAAAGTTCAAACAGACCCTCCCTCAGTTCCAATATGTGACCTGTATCCTAATGGTGTATTTCCCAAAGGACAAGAATGCGAATACCCACCCACACAAGATGGGCGAACAGCTGCTTGGAGAACTACAAGTGAAGAAAAGAAAGCATTAGATCAAGCTAGTGAAGAGATTTGGAATGATTTTCGAGAAGCTGCAGAAGCACATCGACAAGTTAGAAAATATCTGTGTGACTTGGGCATTGTAGACCCATATCCACCATTATGTGACATTAAAGGATCATATACAGCACAGTTTGAACACACCATACTTTTGCGTCCAACATGTAAAGAAGTTGTCAGCCGAGGAGATGACTATTAAACTTAGTCCAAAGCCACCGCAACACCTTTTATTTTCTAAGCTTTGTTGGAATACATTATACCAGATTTAATTTGCAACATGTTGTCTTAACAGTGGACTTATGTAATACTTTTATCCATGTTTAAAAAGGAAGGAATTTGATCAAAGGCAAACCATTTAATGCCATTAACCAAGGAAAAAGCTTCCAGGACTTTGAAATGTTAACCATTTTCTGTCTGTAAAGCTCCAAATAGTTAGGAATGACTTCTACATTTTGTTTCAAACACCTAAGAGATGCTTTTCAGATATTTATATTGCCATATTCTTAATTGAATGCTTTGAATTACTACATCCAGTTCTGCGCCTATATACCCTCTGGTATTGCTTTTTAACCTTCCTGGAATCCATTTTCTAAAAAATAAAGACATTTTCAGATCTGAGAGCTATATTTCAATGTCTGTGGTTGTAATTCTGTATAGGAAATAGTTTAGCATAGTATAATGTAGGAAAACGTAGAGCCTTTTGACCCTCACACTGAAAGTTTTATTCTGACTGAGTGGCTAAAACAAGAACTATACATACATAAAGTGGGAGGACAATTTTCATAAGTTAATATACAGCTCTAGGAATATTTTGCCTTTACTTTTTTTAGGACAGTATTAATGCTTGTCTTTCATTTAACCCCTTGATATTAGAAAGATATAATTAAAACATAACTTAGTAGGAACATTGTGCCAACTTAAAACCTTGATTTACTAGCATCTCAACATTTAGATCCTTTGTCCAGTGGTAGTAGTTATTGAAAAATATTTCGCTTACTCAGTAAGCCAAAGGGGCACTTAAAACCACACAAAGAAAAACAGTACTTTCCATGTTTAGATCTCATTCTAGTTATTTCGGTTACTATGCTTTTTCATTATGAACCAGATTTTCTAGCACCCTGCCCCTGGACTGGCTTGAATTCATAACATCATGGGTGGTATTTCACTTGCAGGAAGTGAAGTTACAGTGACACTCATAGCTAAGTACATAAGTTGAATGTAAGATGCCAAATATTTGAACTGAACCCCACAGTTCTTAAACAGATTGCTTGAATTCTGTGTGAATGATTTGTTGGGAATGTTCCCACATAATTTCAAAATTGTTGTGTACCAGGGTAAAGCCTTAATTTGTATATGCTGTAGCACAGATTGCCTTGGGGATGCTGTTTAGTTTGTGTTGTGTTTAACGTTTTTCTCATAGGAGAAACCTGACTTCTGTACTAAATCATTTACTATACATTTAAAAAGCTGCTCTTTCATATTTGAGCTACAAATGAATGTTACCTTGTGGGATACACAGCCTAGGTTTTAGCTATATGAGCCATGTTTGTTATGGTGCTAATGTTCAATAGCTACCTTTGAATAATTTTTTTCCATTTCCTGTGATGATGGGCAAGTGGCAGAGCTCACCAGTTCACGCCTGGACATGTTACAGGGCTTGGACCCTCCAGCTAGCTCTTTTGGGGCTTTGGTGGGAAGTATAAAGTATTTTTATTTCTAAACCCAAGAACTTTAGAACTGAGTCAAACAAGATCTCTAGCAGTAGTGGCCCTCTAATTGTAAGCTCCAAGCTCCCTTCCCAAGTTGGGAGCAATGGCTTTACTGCATGCCCCTGAAATGGCTGGAAGGGATATGATCTTGTAAATAGGAAAGCTGTTACTTAAAAAAAAAAAAATTGTATTGTTTACCTGGTAGCGATGTATCTCTTGAAAATCATTTTGTCATGTTTACAATGATGTACCTTATTGGTAACAAAGTATTAGTTTGATGTTTAACAATAGTGCCTTTAGTAAATTATTTTACAACCAAAATACGTTGTTTTTTTGTTAGATAAATTTAACAGAATGTAGAAATCCACATTGAGATATACTGTAAGAAATCTTGACTTGGTTTTAGTTTTGTTAAATAGCCTTAATTTTTTTTTTTAGAGCAGTTTTAGGTTCTTAGCAAAACTGAGCATAAAGTACAGAGTTCCCATAGTCCCCTTTCCTTGACTTCACACAAACAGCCTCCCCCATCGGTTTTAGTTTTAAGGGTTTAAAAAGTAAAGGGCTAGTGACTCTACCACTATAAACAACATAGCTTCCAGAGTTGTTTTTAAACTGTTGCACTAAAATTAGGTACACTATAAGGTATAGTTTAAAGTAATCCTTGATGTTAAAAAAGGCTAGACTCAAGTATCTTGACCACAAAAAATCTTTAATGAGGTATAATTACATTAACAGTTGAGGTAACAACTTGCATAGGTATTTAATAGATGAATAATTTTAAACCTTAGCCATTTAAACTCAAGCTGTAGTTTTGGCATGAATGATTTGTCTGTGAAGTGGTAAATTCTCATTGCACTTCATGATCAGCTGCCCCTGATGATTTCAAACTGTAAGCAAACCTACTTGAGAAAAAAGATAAATGATTTTCTAGTAGTTAACATCGAGCTAAGATCTTAACAAATCTATAGAGGTTAGTGGATTCTCTTCTTTCCGAATAAAGTTAGCAGCAGTAGGACTTTAAAGATTTCTAATAAGGTTGTTAGGGAAGAGCAATGAGTATTTCATACTATATTTTTAATAAAATGCAAGTGTAATTTTAATTTCAAAAAGGGCCCAATGTTTAAATATCTAACAGGCTTTTAGTAGTCACATAATACTAGCAAGAGCATTTTAATCCGGCTTTAGTTACTTATTCTAAGTGAGATGCTGAACATTTTGCTCAGATGCCAATTTTGAACAGTTCTATGTCCTATGCAGTTTTTTCTCTTTAAGACTGATTTCTATCCCTTTAAACCAAAAATCTCAAGATACAATAGTACAAAACTAGATCTAATGTTAAATATATAAAATGAACTCATATCCAAGCTGAACTGTACTTGTATTACACCATAATATACTGTTTGCTACATTCTTTTTTTTTTTTTTTTTTTAATGACTGCTTTATTAGAATCTGGACAAACGTTTGCTGCCAGACAAATCACTATTATTAATAGAAGTCTCAGCCATCATTATTTTCATGTCCATAGTACTGAAGCCATTTAAACATGCTGTTTATAAAGCTGTCATCTTCATTTGTATAATACAGTTTGACTATGCCAAGTAAAGAATAATTTTTACAACAAACTTGAAAAAGAGGAAGTTCTGTTTACCAAAGTAAAGTCTATTCTGAGTCCTGTCACACAAAGCCTCAGGGGTATTGAATGATAATGAGTAAGTAATATTTCACTTTGTAGTAGTTGAACTTCCTTTGGGGGCATTTGATACACAAATCTGAAAAAAATGTCCCTTTTCTGGTGAGACTTAGTGAAGCAAGTTTAATCTGATAAGAATTTGTATAGAAAATAACTATAAAAAATAAGTTATAAAATGATGCCACCTGAACTTCTTCAGTAGAAG EMBV3_12102 TCTTCCTTCCCCACGGACCGGGGTACTTTTCTTTCTTTTATTTCCTGATTTTTTTGTATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29097 TGGGAAATCTTCCTCATCACTCTGGTCTCAGTTGTAGTGGTCGTGGGATTCTTTGCTGGG Gene GeneID:788774|MUC21:XM_002697352:322_cdna Constitutive 0 NULL GeneID:788774 23 GENE MUC21 NULL mucin 21, cell surface associated EMBV3_32846 CTACAATACCCTAATATTTTAAGTTTATGAGAATCCAGTAAAAACAAGCAAGACCATACC Gene GeneID:100125240|PLN:NM_001103319:17_cdna Constitutive 1 NULL GeneID:100125240 9 GENE PLN MGC152249 PLB phospholamban EMBV3_31596 GTGCCCATGTTGGAGTTCAGAACCTCTGCTGGCCTCGTGGGGTTTTCCACGTTTTCTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10451 TACTGGTCCCACTACATCGACATCGAGCGCAAGCTCTTTGATGAGACATGCACGGAGCAC Gene GeneID:532026|CALHM1:XM_002698462:485_cdna Constitutive 0 NULL GeneID:532026 26 GENE CALHM1 NULL calcium homeostasis modulator 1 EMBV3_04938 GAACAAACTAGCAGTTACCAGTTGTGGGGGAGGGAATATATAGGGGTGATGGAGGGAACC Gene BVV0102_092616 + 0 NULL GK000013.2:39016055-39202455 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14449 GAAGGATGGAATCACTCGAGATGGAGATGGAGCCACGGTCCTTCCCAATGAGGATGCAGT Gene GeneID:508997|LOC508997:XM_002692311:54_cdna Constitutive 0 NULL GeneID:508997 13 GENE LOC508997 NULL similar to Uncharacterized protein KIAA0802 EMBV3_23129 GGATGCCACGGTGCTCCAAGAGCTGTACCCAGACTCTCCACCCGGTTACGAGGAGTGTAT Gene GeneID:100297073|LOC100297073:XM_002694802:642_cdna Constitutive 0 NULL GeneID:100297073 18 GENE LOC100297073 NULL hypothetical protein LOC100297073 EMBV3_39427 GAGGTTATTGATATTTCTCCTGGTGATCTTGAATCCAGCTTGTACTTCATCCAACCTGGC Gene BVV0102_325564 + 0 NULL GK000008.2:31726910-31871389 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168230 TCONS_00168225 TCONS_00168226 TCONS_00238050 TCONS_00238059 TCONS_00168228 TCONS_00238052 2 XLOC_103025 XLOC_144875 Coding TCONS_00168226 XLOC_103025 Coding Coding TMCO1 3:3166686-3226467 = TSS126187 5057 1 TCONS_00168226_1 188 0.438204469052798 7 0.915523586483774 0.000107894174626982 6.43459663815636e-05 6.78862333541367e-05 4.41360605899369e-07 1.61864333889713e-09 6.09644367459466e-05 4.87426591454334e-06 8.57375806957758e-05 0.00010361657035255 1.41836632242284e-18 6.88733632117254e-05 1.50038670716036e-11 3.01825159139779e-12 1.38486453962108e-11 9.46159350687957e-08 3.7590826844453e-10 0.000916364063607612 0.0007698335932787 5.28639696242869e-07 0.000339626233827776 1.22675677711668e-10 0.000183222076264717 0.000198741204992446 2.19508673983173e-11 0.00012450517136691 4.89175812618246e-08 1.27017490542529e-05 2.50598841053147e-08 7.43062031111932e-05 0.000498664437042067 NM_001034766.2 TMCO1 Bos taurus transmembrane and coiled-coil domains 1 (TMCO1), mRNA. 0.0 2185 100.00 0.239272295827566 NM_019026.4 TMCO1 Homo sapiens transmembrane and coiled-coil domains 1 (TMCO1), 0.0 1276 83.01 0.248961835080087 TCONS_00168226_1 sp|Q3T0N3|TMCO1_BOVIN TMCO1_BOVIN Transmembrane and coiled-coil domain-containing protein 1; 2e-138 389 100.00 0.99468085106383 1 coding 0 0 0 0 1.1278603411077 0.0238199600540773 -0.139689116051123 0.192869663455101 GAAGCGGAAGTGAGGCTTCCTATCTGTCAGAGTCGGTGTGTTACTCCGCGGTCCTGAAATCTAGGAAAATCGTTTTCGCTCCGCTTCTCCTGGCTGTCAAGGGCTTCCCCCGTGCAGGGTGGGAGTGCAGAGAGTGAACCGTCGCGAGATGAGCACGATGTTCGCAGACACGCTGCTCATCGTTTTTATCTCCGTGTGCACCGCTCTGCTTGCCGAGGGTATAACTTGGGTCCTGGTTTACAGGACAGACAAGTACAAGAGACTGAAGGCAGAAGTGGAAAAACAGAGTAAAAAATTGGAAAAGAAGAAGGAAACAATAACAGAGTCAGCTGGTCGACAACAAAAAAAGAAAATTGAGCGGCAAGAAGAGAAACTGAAGAATAACAACAGAGATCTGTCAATGGTTCGAATGAAATCCATGTTTGCAATTGGCTTTTGTTTTACTGCCTTAATGGGAATGTTTAATTCCATATTTGATGGCAGAGTGGTGGCAAAGCTGCCTTTCACCCCCCTGTCCTACATCCAGGGACTGTCTCACCGAAATCTGCTCGGGGATGACACCACAGACTGTTCCTTCATCTTCCTGTATATTCTCTGTACCATGTCAATTCGACAGAACATCCAGAAGATTCTTGGCCTTGCCCCTTCACGAGCTGCCACAAAGCAGGCAGGTGGATTTCTTGGCCCTCCACCTCCTTCTGGGAAGTTCTCTTGAAATCAAGAAGAACCCTATATTTCTGTCATTCTTTTCAGATATTCAAACCAGACCCAGCAACTATTTTACAGCAAGAGCCATAGGCAGCCTTAGCACTTGGGCTCATTTCTAGATTTGAGTTATTTTTAGGCTTTTTGGGGGGTATAATTTGAATAAGAATGGTACCTAACAAACGGGATAGTGCTTTTGGTTACAGATTAATTTTTTTTTAACAAGTGTGTTGATTAATTAAGCCCAGGTAATGTTTATGTAATGAGAAACAAATTCGTATTTTGCTTACATGAATATATCTGTGGAGTCAACTTTCAAGTATGTGCTGTGTGCCATGTATCTTGGAAGTTGGCTTTCCATGAGCATTTTGAGATCTGGAAGAAAAATTTAGTTTATGTAACTCTTAGTTGAAACTATATGTTGTGTGTGTGTTTTTTTTTTTTTAAGCAGAATACATGACCTGAGATCTAATAAAAGAGGCTAGAATTTTACTTATTTCATCTACAAGGAGACATCTGTTTTAATTTGCCATATTTCTAGATACATATTTTTAGTGATCTGAACGTAAGGGTAAACATTGGCCAGAAAGGGGCAATGCTGTTTTTGTTTTTATTCTTTTTCTCCTGTTCCCCTCACCATGGGGCAGTATTTGAGAGTAATATTTTATCACTCTTGCTTCATATGCTCAAATATAAAGTTGCCCTGTTATAGGAATTGGAAAGCAGGAAAGGAAAGGAAAGTAGTAACTCACGGGAGTATAACAGTAGAGCTCCTCAGCAGTTTCCTTCATACCCCAGTACAATCTGTTGGGTTCTTGAGAAGATTCAAGTTGATCCCACTCTTAGCTCTCCCCCTGGAGGCAAGTTTATGGTTGCATGTGGTTAATTTGCAGAGCTTCCTTGTAGTCACAGTGGCCTTCAGTTCCTCTGTGCTTCTTTATAAAGGATGAGAGAATGCTTATACCATGATCTTCCTCCATGATCCGTGGAATTGGAAATCCTGTGTGGAGTGATAGCTCTAGTTACTAAAATATTTACATTAATCAGTAGTGTCCTCAGATGCACGTTTTCTACCAGTAAGAAAGTCACAGCTGGTAAACCAACATCAGACTTTTCAATTGCATAAAGTCCAGAAGACCGTGGGATAATATTTTCAAAGCTGGACAAAATAATTATCAACCTAGAATTTTATGTACAGCTAAACCATAAGTTTGGGGGCAAAACTGTGGACAGTATTTTGACAGCTACGGTATCCAAGATAGTTGAATTATTAAAGGATGTATTTTCAGACACAAAAAAAAATACCAGGAGAAAGGTGTGGGATATAAGCACAATGGTCAACACAGAAATTGATAAAATCTATGGATAAAGTTAAATGTTTCATGGATTATCTAGTTTAGGGATTATCTCAAGGCAGCACCACAAGATTATACTGTTCTCACACTCATTTAACAGATGAAGAAACTGAGGCAAGAGAGGTTAAATAACTTGATCAGCATCACATAGCTAGTGAGTGGCAGAGTTAGGGTTTGAACCCAAGCAGTTAAAAGCCATCTAGCCCAAGCTCTCCAATGCTGTGTTGCATTATAACTTCCCCATATAGTATGTGGTGAGTCTCTTCCCATCACTTTACCTTATCTCCTCAGAAGATACGAGCTCCAAAGTTGGTGCTTTGTCTTCTTTTGTTCTTGTTTCCTTGAAGCCATCACATCCCATGGTGGGAGAGAGCACCGCAGGAACTCATTAGATGCAGATGAAATGCAGCAGAAATCTGTTTCAGAAAAGGGGGCTTCCCTGGTGGCTCAGACAGTTAAAGAATCCACCTACCAATACAGGAGACACAGGGGATGCAGCTTTGATCTCTGGGTTTGGAAGATCCCCTGGTGAAGGAGAGAGCAACCCCCTCGAGTATTCTTGCCTGGAGAATTCCATGGACAGAGGAGCCTGGCGGGTTATGGTCCATGGGGTTGCAAAGGAGTTGGACACAACGGAGCGACTAACACCTGTCAAAAAAGCTGCCTGATAATGGATGGTGATGACTTCTAATGGTCTTTTCTCTATATCACTAACTGTTCCAGGCAAAATAAAAATTAAAAAGGTGACAATGAAGGAAGTGATGATCATAATAACAATGATGACAAATGATGGAATATCTAAAATAAAACATAAAATGATAAGAAACCACCCTCAAAATTCTGCCATCACCTGGTAAAATGAAAATATATAGTTCATCTTACCACTCACCCTCTTAGGTTTTGAAGCTGATGCTTTCTAGGCAGATTTCTAATGGATGTTGAGGTTTTTATAAATTTCAGTGGAAGAGGATAAATAAGACGGAGAAGTAAAAAGGGAGAAGGAAGGAAGAGAAATAACATCTACTCACCCTATTCCTAAAAGGAAGCAGTAACAACGATGTATACACTGGAAAACAAAGCTGTTACATCACAGGAATGTAAATTCAAGGAGATTTTAAGGGCTACTGGAGCCTTGCTGTTGTGGGTGTTTTTTTTTTTTTTTTTTCCTTAATTACTTGCCCCGAAAAATTTTTAAGACTAGCCATTTGGATGACTCTAAATCCAGACCATCACCAAGTTAATGGAGATGACATTCATGGCCAATCTTAGGTCTGCCCTTGCTTGCTTCTGTTTTTCTTACCTTATTCTAAAACAAATCCTAGGCATTGTATTTTTTACTCAGATATTTCAAGGCTTTAAAAAATATCTATCTACATTTATATCTCTGTATCTCAGTACCATTTTCACACTTTAAAAATTTAGCACTTCCTTGATAGGATAAATGTTAAAGTTTTTTACAGTTTTTTTTTTTTTTAATCTGGAGCAAATATTAGATTGCCATATTGTAGTTGGTTGATAAGTGTTGTAAATCTCTTCTATTGTAGTGATTCTCAAACTAGAATACATTAGAATCACCTGGAAGTCTTGTTAAACCACAGTCCCCTGAGCCCCACTGCAGAGTTTCTGAATAGAGCTTGAGAATTTGCACTTCTAAAAAATTCCAAGGTGACATTGATATTGGCTGGTTTAAAGTCCACTCACATTTTACTTCCCCACCATCTCTCTTTCATTTCCTGCTTTGCAATTTTTAAATAAATATGCTTAGAGAATTTTAATAGTGTTGGGAAATACTTATACAATAATATATGGGAAAGAATCATTAAACTAATAAAATATATCTTCAGTTCAGTTCAGTTGAGTCGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGAACCCCAGCACACCAGGCCTCCCTGTCCATCACCAACTGCCAGAGTCCCCCCAAACCCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCCGTCGTCCCCTTCTCCTCCTGCCCGCAATCTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAGCTCTTCGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAGTGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCCCAAGAGTCTTCGCCAACACCACAGTTCAAAAGCATCAATTCTTCGGCACTCAGCTTTCTTTATAGTCTAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGATGGACCTTTGTTGACAAAGTAATATCTCTGCTTTTTAATGTGTTTAGGTTGGTCATATCTTTCCTTCCAAGGAGTAAGTGTCTTTTATTTTCATGGCTGCAATCACCATCTGTAGTGATTTTGGAGCCCAGAAAAATAAAATCAGCCACTGTTTCCACTGTTTCCCCATCTATTAGCCATGAAGTGATAGGACCGGATGCTGTGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTTTTTCACTTTCATCAAGAGGCTCTTTAATTCTTCACTTTCTGCCATAAGGGTTGTGTCATCTGCATATCTGAGGTTATTGATATTTCTCCTGGCAATCTTGATTCCAGCTTGTACTTCATCCAGCCTGGCATTTCTTATGATGTAATCTGCATATAAATTAAATAAGCAGAGTACAATATACAGCTTTGACATACTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGGTATTCCCATCTCCTTCAGAATTTTCCACAGTTTATTGTGATCCACACATTCTATTTCTGCTTTATTGACTATGCCAAAGCCTGTGACTGTGTAGATCACAATATTTTCACTACATTTAATTAAAATGATAAAAATAAATTGAAACCC EMBV3_07405 CTGTAATGTCTCCAAGAAGCCCACAGTCTTCACCCGGGTCTCTGCTTACATCTCTTGGAT Gene GeneID:281139|CELA1:NM_174048:8_cdna Constitutive 0 NULL GeneID:281139 5 GENE CELA1 ELA1 chymotrypsin-like elastase family, member 1 EMBV3_09445 TGGCTTTTGTTTTCTAAACATTGTTTTCCAAGCTGTTGTATATTTGGATTGCAGAACAAT Gene GeneID:533984|SUB1:NM_001105407:48_cdna Constitutive 2 NULL GeneID:533984 20 GENE SUB1 NULL SUB1 homolog (S. cerevisiae) EMBV3_13427 GGTAGTAACTGCTGATGGCCTGAGGGCTCCTGTGAACACGAATTTCTTCAAAGTCTCCAG Gene GeneID:511904|TGOLN2:XM_002691368:227_cdna Constitutive 0 NULL GeneID:511904 11 GENE TGOLN2 NULL trans-golgi network protein 2 EMBV3_16834 AAATATTTTAAAGATATAAATATATACTGTATATGTTATGTAATTTATTTTAGGCTATAA Gene GeneID:511800|ANKH:NM_001109793:14_cdna Constitutive 2 NULL GeneID:511800 20 GENE ANKH MGC166183 ankylosis, progressive homolog (mouse) EMBV3_07952 TTTCAACTTAAGGACCGTGGGCTGACCGAGCTGCTCTTCCCGATGAGTTATGCAATCTGA Variant GeneID:508699|LRRC57:NM_001031754:133_cdna 202^340 1 EMBV3_21282 GeneID:508699 10 GENE LRRC57 FLJ36812 MGC140628 leucine rich repeat containing 57 EMBV3_24693 TCTGAGACCTCTAGGATTTGGGGGGAAGTATGATTCTCTGTGTTTCTAGGGTTTCTTCCC Gene BVV0102_342069 + 0 NULL GK000014.2:76469350-76757694 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05181 CTACAGGTCATTATGCCTCGTGCATTCACTCTGCAAGGCTTCACTGAGAGCTGACCGTTT Gene BVT0102_007382 + 1 EMBV3_19321 GK000007.2:15881850-15890257 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219224 1 XLOC_132543 NonCoding TCONS_00219224 XLOC_132543 NonCoding NonCoding - 7:15884659-15884894 - TSS163222 235 1 TCONS_00219224_1 77 1 0 0 0 0 0.000106010476463797 0 0 0 0 0 0 0 0 3.66291576922544e-05 0 2.08774203072149e-05 0 0 0 6.10292265377246e-05 0.000948657334584449 3.87539775637718e-05 0 0 0 0.000412760168840594 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0125428642599773 0.937502010447808 0.0243469236410693 0.616514577398475 GCACATGTCTACACCTACGTGTATCAGGGGTCGCACACGCCGGATACATCCCCTTCCCAGCCCCGAGGTTGGAGATGCTGCAGTAGAACCCATCCCTGGCCTCACCACTGAGTTCCAGGCGCCCTACAGGTCATTATGCCTCGTGCATTCACTCTGCAAGGCTTCACTGAGAGCTGACCGTTTACGGGCCTCAGTTCTAGGCGCTTGGGAATACAGTCGGGGGCAGCACACACCA TCONS_00215625 TCONS_00215626 TCONS_00215627 . 5' 62 TCONS_00215625 TCONS_00215626 TCONS_00215627 . 5' 62 EMBV3_09002 GGCTGCCTTTCTCTAATTTCTACCTTTCTGTGACCCCCTTCCTCCCTGTCTCTGAGTCTA Gene BVV0101_041629 - 1 EMBV3_30055 GK000005.2:110187073-110213000 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19427 GTGCACACCAAGAGATTGCACACTTCTTCTGCGACATCAACCCCCTTCTGAGTCTGTCCT Gene GeneID:618597|LOC618597:XM_002695722:374_cdna Constitutive 0 NULL GeneID:618597 19 GENE LOC618597 NULL similar to olfactory receptor EMBV3_21071 ATCTCTTCTGCACTGTATTACACCCAAGACAAAAGGCAAAGGGCATGAGGCATCCATGTC Gene GeneID:785500|LOC785500:XM_002689672:76_cdna Constitutive 0 NULL GeneID:785500 8 GENE LOC785500 NULL similar to Uncharacterized protein C9orf144B EMBV3_36108 AGAGTGAGAAAGCTGCTATTTGGGTAACTTATTTCTCCATGGGAGGGGGCAGGGAGAGTC Gene GeneID:540312|LOC540312:XM_002699587:77_cdna Constitutive 0 NULL GeneID:540312 X GENE LOC540312 NULL similar to Protein DDX26B EMBV3_07806 TTTCCACGTCAAGCCTTGGAGCATTTCTCTGTAATCTGCCTCCTCCAGCTGACCCGAGCT Gene GeneID:513669|PTCRA:NM_001075633:276_cdna Constitutive 0 NULL GeneID:513669 23 GENE PTCRA MGC140432 pre T-cell antigen receptor alpha EMBV3_18811 TGGATTTGACTTGGCAGCATGTATTGAATTGGCTTTAGATGTGGCCAGTCGCTACAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11288 TACCTCCAGCCCCAGCTCCTGTTCCTCCAGGACTCTGTCCCAGGGCTGCCTGGCATCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27909 CTGTTTAAGAACATGACGCCGACCCCTTTCCTGCGGTTCTATCTGGATTCTGGGGAGCAA Gene GeneID:533011|MRPS25:NM_001075979:34_cdna Constitutive 1 NULL GeneID:533011 22 GENE MRPS25 MGC134542 S25mt mitochondrial ribosomal protein S25 EMBV3_01140 CACCGCGTTCCTGCTGACAGATGCCCAGGTTCTAGATGAGAGCTTTCTCGTGCTGATTAA Gene GeneID:100336612|LOC100336612:XM_002686710:20_cdna Constitutive 0 NULL GeneID:100336612 4 GENE LOC100336612 NULL dynein, axonemal, heavy chain 11-like EMBV3_10508 TGCATGGACCTCAGTGCAGCATAACGGCTCCCACTTGGTCAAGATCAAAAGCTTGAATGG Gene GeneID:784375|CNTNAP3:NM_001081745:2_cdna Constitutive 0 NULL GeneID:784375 8 GENE CNTNAP3 NULL contactin associated protein-like 3 EMBV3_43468 CAGTTCCGCACAGAGAATAATGGAGGACAGGAAAATCGACGGGACGAGAACGCCACGGGA Variant GeneID:407240|USF2:NM_001001162:532_cdna 206^645 2 EMBV3_12995 GeneID:407240 18 GENE USF2 NULL upstream transcription factor 2, c-fos interacting EMBV3_16251 GGATGAGGAGGAACAGGAGCGAGAACACCACGGCTCAGGTGGATCAGCAGGATCCAGGAG Variant GeneID:100336932|LOC100336932:XM_002683983:3_cdna 55^358 1 EMBV3_23490 GeneID:100336932 Un GENE LOC100336932 NULL ladinin 1-like EMBV3_00758 ACCCGGTCGCCTTCCAGAGGGCCTTGCAGGCTGCAGTACAGAAATGGAGATCAGAAGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16344 GCTGCATTCCAGCCTTCGCTTCATCCAAGTGTTAGGGCCAACAGCCATGTTTTCTCCAAA Gene BVV0102_388965 - 1 EMBV3_00266 GK000023.2:49151655-49282978 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00591 AGAAGTAGAGGGGGTGGGGGACCATTTCTGCTTTTTCTGTCACATAGATTGACGGGAGCT Gene BVT0102_169930 + 0 NULL GK000010.2:80131965-80135043 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018024 TCONS_00018028 TCONS_00018035 TCONS_00018032 TCONS_00018027 TCONS_00018034 TCONS_00018030 TCONS_00018029 TCONS_00018031 TCONS_00018026 TCONS_00018033 TCONS_00018025 1 XLOC_009164 Coding TCONS_00018030 XLOC_009164 Coding Coding RDH11 10:80133632-80145627 j TSS12198 2709 1 TCONS_00018030_2 316 7 0.774720693680173 0.0072801422040987 0.00674752093527233 0.00734958114729303 0.00466773619648654 0.00444006228092094 0.000496385787473457 0.00201422107450408 0.00527653249136429 0.00766917931183837 0.0011845387469397 0.000543354158892894 2.03174912692301e-06 0.00123019008244391 0.0019204314013457 0.00143385706368968 0.0242329308388495 0.0168648542656056 0.011873795945338 0.00657243804559345 0.00311414648674486 0.00257842136665913 0.0047666008186804 0.00593316533780123 0.0122355578791495 0.00204682024775115 8.91334394323609e-19 0.00436826652780093 0.000745931026749344 0.000428290359914346 0.00118501374191137 XM_005193708.1 RDH11 PREDICTED: Bos taurus retinol dehydrogenase 11 (all-trans/9-cis/11-cis) (RDH11), transcript variant X2, mRNA. 0.0 4843 100.00 0.990771502399409 NM_016026.3 RDH11 Homo sapiens retinol dehydrogenase 11 (all-trans/9-cis/11-cis) (RDH11), transcript variant 1, mRNA. 0.0 1279 82.61 0.469176818014027 TCONS_00018030_2 sp|Q8TC12|RDH11_HUMAN RDH11_HUMAN Retinol dehydrogenase 11; 0.0 535 89.12 0.927215189873418 2 coding 0 0 0 0 -0.740360465264719 0.29439325786392 0.0405001611517241 0.553577938053021 AGGAAAACTCCCTGCGGGTCTCCAGGAAGATGCTGTCCAGCGGGGTTTGTACATCAACCATCCAGCTTCCTGGAAAAGTGGCTGTGGTCACTGGAGCCAACGCAGGCATCGGGAAGGAGACCGCCAAAGAGCTGGCTCGAAGAGGAGCCCGTGTGTATTTAGCTTGCCGGGACGTACAAAATGGGGAATTGGTGGCCAGAGAAATCCAGATGATGACAGGGAACCAACAAGTGTTGGTGCGGAAACTGGACTTGGCTGATACTAAATCTATTCGAGCCTTTGCCAAGCGCTTCTTAGAAGAGGAAAAGCATCTCCACATTTTGATCAACAACGCAGGAGTGATGATGTGTCCCTACTCCAAAACAGCAGATGGCTTTGAGATGCATATGGGAGTCAACCACTTAGGTCACTTCCTCCTGACTCATCTGTTGCTAGAAAAGCTGGAGGAATCAGCACCATCGAGGGTGGTGAATGTATCTTCCTTAGCACATCTCCTGGGAAGGATCCACTTCCATAACCTGCAGGGCGAGAAGTTCTACCAATCAGGTCTGGCCTACTGTCACAGCAAATTAGCCAACATTCTCTTCACCCAGGAACTGGCTCGGAGGCTAAAAGCATCAGGCTCTGGCGTCACGGTGTACTCTGTGCACCCTGGCACAGTTAACTCTGAACTGGTTCGGCACTCAGCCCTCATGAGATGGATCTGGTGGATTTTCTCCTTCTTCATCAAGACCCCACAGCAGGGAGCCCAGACCAGCCTATACTGTGCCTTAACGGAGGGTCTAGAAGTTCTCAGCGGAAACCATTTCAGTGACTGCCACGTGGCATGGGTCTCTGCACAGGCTCGTAATGAGACGGTAGCAAGGCGGCTGTGGGATGTCAGCTGTGACCTGCTGGGCATCCCTGTGGACTGGCTGATGATGGCAGCTGGACCCAAGAGAAGCCTGAAGCAGACGACTCAGCACACCCTGCCAAAATGATTCTCCTTCAGGATGGCCAAAACCTTGAGCACGAAGCAAACCTTCCAACCTTGCCTGCTTGATGCCTGATAAAAGCCCAGTGTGCACTGCCGGATTCATCCAAACACCTTGCATTTGTCCAGGTTATTTTGCTCCTATTACTGCCCATTACTAGAGATAATATAGGCTAAGTAGACCCTCAGTTGACCTCCAAGCTCATCTTTTCCTTCTGAAGCCTCTTACCCAGGGGAACCTAAGCTGTGGCAGGGGTTGATTGATGGCACTTTGGATTAGTTTCTGTCCTCTTTGTCCACAGTGTAGTTCTTCTGAACCAAACTACCTTCAAGGGGAGGCATGATTTAGCCTCAGCTAAACTCCAGGAGTCCCAGTGGCTTGGCTCAAGGGCAGGGTTTGTCCTTCTTCTCCTAAGAAAACCACCATGGCACCAACATCTGAATTCTTTCAGCTCTTCACTGAATCTGGATTGTGGCATGGCTTTATCTTTGCCATGCCTAGATCACAGAAGAACTTCCTTTTCTAAGAAGGTGGAGTTTACTGGATGGCAGAGATTTGCAGAAAGGCAGAAATAAACATCAAATTTAAACTGTCATTCATTTTTCTGCTGTTTCTCAAATTAGCAAGAAGCTAGTGGAAAAGGCAGTTTGAAAAGATTGGCCACTTGACTTCACTTACTGACCCTAATTCATGGAGGCTTCCTCTTTGTGCCTTAGTTTCTCTTAGAAAACCAGAAGAGGAAGACTATTTAATGATTGTCCCTGAGTATATCTTTGTGTGTGTGCTTGTGTTTTTAAGCAGTTGGGAGTATTCAAAATAGTCACAAAGGAACAGTATTAAACGGACCTTAGTGCAGATAAATAATCAGAGACAGAGCAGACCTGTGTCATTCAGTCTTTGATACAAATAGGAAATAAACTCTACCCAAGAAGCACATGGGTAGCAGGGAAGAAGTCCAAAAAAGAGAAGAATCCTGGAAGGTAATGCATGCAAAGGCAATGAAGGGGCTAGAAAAGGGTGTTGTTGTTGTTTAATGCACAGCTAAAGATGGTAAAATCCAGCAATAGAAGAACTGAGGGTGACTACCTTGTGTTCAAGCATGATAAGGCACTGTTTGAACAAGCTCCCGTCAATCTATGTGGCAGAAAAAGCAGAAATGGTCCCCCACCCCCTCTACTTCTTTATTCAGCAAAATTATCTTAAGGACTGGTATTGGTAATTATGGTCATTTTAAAACTCTTTCAGGGCATTTCCATGACAAGATTAAAATGTCTGCTGTATAGTATACTTGAAGAATGTTTATCCAAAGTAATGGAAGTCTGAGAAATTGGACACAAACATGTCCCATCACTTGTTTGGAGTACATTCTTTTAGTAGAGTTTGTGATTTTCTTGGACTAATAATTACATGTTCACTTTGGTGGAGAAAAGAGTTATAGGGCCATAGTCTTCTCATATTTGTAAATAATCTTTTGTTGAACTTGTTTTGACCATTAAACTATATATTTAGATATGGTCATTTTATGGAAAAATTGGAAAACTTTTGATAATAGTACAGAACTGAATTAATATTTTACTTAATTTATATTGAACTGTCAATGACAAATAAAAAATTTGATGATTTACCATGTTTTTATTTACCAGAATAAAACCTGTAATAATTAAGCAAATTTAATTTGAGTCAACAGAAGAAAGCAATTAAATAAAAGTTTAATTACGGTCAAAAGAGGAAAACA EMBV3_14923 AGACCTAACAGTTCTTGTCAACCCCAGGTCAATGGGGCTGGAATGGCTACGTGAAAATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19566 GCAGCGCAGCTGGAAGCGGCGGAGCGGAAGCAAGGATCAGTTCCCAGAGGTCTACGTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36788 ACACCTTCCCTGCAGTTTCTGTGGTTACAACCTGTTTCATGTCTTGGGGTTGGCTATGGG Gene BVV0102_172022 + 0 NULL GK000021.2:29740352-29762152 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27459 CTATGAACGGGTGAAAGAATACAGCCAGAAAGTCCTGGAGCGGCAGCCTGATAATGCCAA Gene GeneID:786577|TTC9C:NM_001083792:136_cdna UTR3_Alt 2 NULL GeneID:786577 29 GENE TTC9C MGC139386 tetratricopeptide repeat domain 9C EMBV3_42369 ACTACCGGGTGCCAATGGAATGAAAGGAGAAAAAGGAGACTCGGGATTGCCAGGTCCACA Gene GeneID:615661|COL25A1:XM_002688106:191_cdna Constitutive 0 NULL GeneID:615661 6 GENE COL25A1 NULL collagen, type XXV, alpha 1 EMBV3_07371 GTCCCTCTTCCAGAGCATGGAGTGTCCGTCGTTTTTGTCAACCTGGGAAACACCAAGATG Gene GeneID:508170|MCEE:NM_001045995:12_cdna Constitutive 0 NULL GeneID:508170 21 GENE MCEE MGC134149 methylmalonyl CoA epimerase EMBV3_37159 GCAAGTTTACAGTTTCATACCAATTACCCAAAACCTAATTACCAACAGACCACAGACCTC Gene BVT0101_031333 + 0 NULL GK000030.2:136915810-136925769 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245906 TCONS_00245898 TCONS_00245903 TCONS_00245897 TCONS_00245901 TCONS_00245904 TCONS_00245905 1 XLOC_150848 Coding TCONS_00245901 XLOC_150848 Coding Coding GPM6B X:136814168-136918255 j TSS184495 2714 1 TCONS_00245901_4 270 7 0.973992659915839 0.00345883460233592 0.00606270652615707 0.00469918396275883 0.000814637274765602 0.00137703591979631 0.000448751662386779 0.00136339830647978 0.00180087713882085 4.49566540719357e-08 5.18489879381188e-10 5.52473298774556e-16 1.9264375786988e-10 0.000266862079508785 0.000485950269657821 0.00047770476200024 0.000110601263236547 0 2.29800816284372e-10 0.00440277820768442 0.00422296849111243 8.88877951886848e-11 8.26803699542239e-06 7.98354245883699e-05 3.81000430316181e-11 0.00342992960559343 0.00266415254816467 0.00214887398771611 3.90782571411473e-24 1.13076698272073e-142 9.69295243716767e-11 XM_005228441.1 GPM6B PREDICTED: Bos taurus glycoprotein M6B (GPM6B), transcript variant 0.0 4895 100.00 0.999631540162122 NM_001001995.1 GPM6B Homo sapiens glycoprotein M6B (GPM6B), transcript variant 1, mRNA. 0.0 3135 84.77 0.992262343404569 TCONS_00245901_4 sp|P35803|GPM6B_MOUSE GPM6B_MOUSE Neuronal membrane glycoprotein M6-b; 0.0 547 98.51 0.988888888888889 1 coding 1 1 0 0 -0.465489731080575 0.0291773447996057 -0.0212246317497057 0.651114668489703 GTTCCATGAAGGAACATGAGAGGCTGCTTTGAATGCTGCATCAAGTGTCTGGGCGGAGTCCCCTACGCCTCCCTGGTGGCCACCATCCTCTGCTTCTCGGGTGTCGCCCTGTTCTGCGGCTGTGGGCATGTGGCTCTGGCAGGCACCGTGGCGATCCTGGAGCAGCACTTCTCCACCAACACCAGCGACCATGCCCTGCTGAGTGAAGTAATTCAGCTGATGCAGTATGTCATCTACGGAATTGCATCCTTTTTCTTCTTGTATGGGATCATTCTGCTGGCAGAAGGCTTCTACACCACGAGTGCAGTGAAAGAACTGCACGGGGAGTTTAAAACAACCGCCTGTGGCCGGTGCATCAGTGGGATGTTCGTCTTCCTCACCTATGTGTTGGGAGTGGCCTGGCTGGGTGTGTTTGGTTTCTCGGCAGTGCCAGTGTTTATGTTCTACAACATATGGTCCACCTGTGAAGTCATCAAGTCCCCCCAAACCAACGGGACAGCAGGAGTGGAGCAGATCTGTGTGGACATCCGGCAATATGGAATCATCCCTTGGAATGCTTTCCCAGGAAGAATATGTGGCTCGGCCCTGGAAAACATCTGCAACACCAACGAGTTCTACATGTCCTATCACCTGTTCATCGTGGCCTGTGCTGGAGCTGGCGCCACCGTCATTGCCCTGATCCACTTCCTCATGATACTGTCTTCTAACTGGGCTTACTTAAAGGATGCAAGCAAAATGCAGGCTTACCAGGATATCAAAGCAAAGGAAGAACAGGAACTGCAAGATATCCAGTCTCGGTCAAAAGAACAACTAAATTCTTACACATAAATGTTTGCCAGAGGGTCTCAGCCAACGAATTTACAGCTCTGACAAATCATCAGACAGCTGCTCTGCAGTACAGATGTGTACCCCACCAAACAAACTCATGTAGAAGTCCAAACACTTCACTGTCTGTCTCAAGCTGCTGGGATGTATTTCTAGGAAAACCTTCCAGTAGGTAACTCTTTTTCTTTACAACAGATATTGGAGGTTTCATGGGAGCCATTTTAAAAGGCAACACTTCAACAAAATGAATATTTATCCTTTTGAAATTTGTGGCATGTTCACAATCCTACCAAGACAGGCTGTGAGAACACGACACCCCTTGATAAGGACCATGCCATAACAGCATCAGGCGGTATGACCACACATTCACTTCTGCCATCTGTCCTCAAACACATCTAAATAGGAGCTAAAATGGAATTGATGTGACATTCCATTTCTGACAGCTGACATGTATGAAATTGTGGCTCAAAGATAAAGTGATTCTTAGAGTTGACCCTTGTAAGAAAAATATTAGCTGGTCTCCCCACCCCTCTTAAGTCCAGGACATACTAATTTCCTGGTCCAATCAGAAATTGTTTTTCTTTCCCTCAAGAATGCTAAAATGAGCCCACTATAATAATTCTGTATTACCTACCATGGATGAAGCTAGATTCAGACTGACAAGCTATCCAAAATCAATTTTGTAATAGATTTCTTTTAAATAAATGTCAGCTTTGCCTTAATGAGTATGTTTTCAATTTCTAAGAACTTACAATAGGTAACCCCAAATCCTTCAAAGAATTTTGTTCCACAAATGTTTTTCTTAATGAAGAAGTGTTACCTTATTAAAATGACCACCACTCAAAACCATTTTTATGTGGTCTAAATAGCAAGTTTACAGTTTCATACCAATTACCCAAAACCTAATTACCAACAGACCACAGACCTCCTACTTTTATAGACTTGAATATTGAATTAATTTCAATTAGGTTTGATATTTATTTCATGTTTTCTTATCTAAAGTTTCCTGGAATAAAGTTCAATATTCAGGAAAAGAAAGAAAAAAAAAAACCCAAATGCTTGAGTTTAAGCCATCTTCAAAAGAAACTTGCCTTCTAAATCATTGTGTTTCAGAACATTAAGTGACTATAGGTATTGGGTATTAGTGATGGTAAACTTTGTGTTGTTCTTTATGAAATGATACATATAACTGTTGGGTGCATCAGTGCTTTTAAAGGGGGCTGCATAATATAATAGGGTTAACTATGTATATTCATGTTAAGAATTAACTTGTGGTTTGGCTGTTTCCTGGATTTTAAACATATCCACGTGCAGAAATGTGTTAAAATGAAAGGAAGCATACCTTTATCAGATGCTATTAAAATTGAACAGCAAGTATAATATTTCATTTGGATTCTCTTTGTTGGTGTTGTTGTTAATGCCTAAAAATGCCTATTTGGATCTTGACTATTTTTTCTTTTTCTAAATCGGGAGACGATCTCTTCTGTGTAGAACAGTTGTTCCAGAATAGCTTGGTGTTTTGTTTTCCTGTTGCATGACAGACCTAAATATTTTTTCCAGCAGTGGAGGTGCTGTTTGAGTCCAGTGTTCTAGAAGAGGCAGTGTCTAAAGCCTAATTTTACTTTTCTAATTCTGGTAGCTCTTACCAGGAATTTTTGAAAGTTTTGTTTAAGTAGTCTAATATTTTTTATGTAAAGAGCATTAAATTTTGCTATGTATAAATTTTTGTAACCTAACAGTGAATCAATATTTTCTATCAGTGCCAAGGGCTTCCTGTAGTTCTATTCAAGTGTTACAATAAATATTTGTAGATAATAGTCAATACCTGTGTATGCTTATTTTAAAGATCTATTTAGGTGGAAATAGCTGTGGCTGTATTAAGAGAAATG EMBV3_41943 TGCAAGTGTGAGTGATGATCATACATGCAGCTGATGGTTGCAGAGAAGAATGGAACAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22070 CCTCCATCTTTCCAAGCACCGGGGCGAAAAACCACAAAGGAAAGGAAGAAAATTTATATA Gene GeneID:540141|KDM2A:XM_002699363:272_cdna Constitutive 0 NULL GeneID:540141 29 GENE KDM2A FBXL11 lysine (K)-specific demethylase 2A EMBV3_30984 TTCCGTGCATCGTTCGGAAAAAACCCCAGGTTCCAAATACAGCTCGACAAGCGGCCTCTC Gene BVT0102_368232 + 0 NULL GK000027.2:35805129-35900359 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131535 TCONS_00149042 TCONS_00131533 TCONS_00168480 TCONS_00178733 TCONS_00218950 TCONS_00162302 TCONS_00168478 TCONS_00186557 TCONS_00021875 TCONS_00168479 TCONS_00129560 TCONS_00178728 TCONS_00255144 TCONS_00207145 TCONS_00011613 TCONS_00207146 TCONS_00218944 TCONS_00011614 TCONS_00098203 TCONS_00131532 TCONS_00131531 TCONS_00147823 TCONS_00178730 TCONS_00131488 23 XLOC_080240 XLOC_090919 XLOC_080238 XLOC_103118 XLOC_108506 XLOC_132269 XLOC_099184 XLOC_112609 XLOC_012548 XLOC_078273 XLOC_108501 XLOC_158076 XLOC_125663 XLOC_007164 XLOC_125664 XLOC_132263 XLOC_007165 XLOC_058449 XLOC_080237 XLOC_080236 XLOC_089710 XLOC_108503 XLOC_080193 Coding TCONS_00186557 XLOC_112609 NonCoding NonCoding - 4:28981025-28981694 - TSS138925 669 2 TCONS_00186557_2 107 1 0 5.04003842825042e-05 1.65220881881981e-05 2.6347800294678e-05 7.67128918004173e-05 8.04618190590629e-05 6.67340001743376e-05 5.02366887481601e-05 3.23543833301851e-05 0.000114776353102677 0.000100904156947909 2.52179144529941e-05 5.85168111144673e-05 9.65431640714993e-05 0.000139283126129092 0.000217891737511642 0.000570913133593805 0.000109102723715775 0.000139862620326037 5.3594374410669e-06 0.000294426402091814 6.63550157869369e-06 4.15164045014223e-05 9.51539900942328e-05 5.25334629035089e-05 1.81238148793375e-05 3.33537756756119e-05 2.66257992959201e-05 1.82949026561345e-05 0.000135697002898516 9.73582836758597e-06 XM_002698950.2 FRMPD2 PREDICTED: Bos taurus FERM and PDZ domain containing 2 (FRMPD2), 3e-11 73.4 78.32 0.212257100149477 0 noncoding 1 0 1 1 -0.00615637206504964 0.968424672851612 -1.02613056179786 0.00497382998682155 CAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGCTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAACACGAAGGGGCAGTTTTTCCGTGCATCGTTCGGAAAAAACCCCAGGTTCCAAATACAGCTCGACAAGCGGCCTCTCTCCCCGGGGACATCTCGAGAGGCAAGCGGAGTTCCATGCCTCAACCCAAGACGAGGCCTGACTCTCCTGTCCCCAGTCTGCAGGGACCCTGCGATCGGAGTCTGAAATCAGAGGTACCCTGCGGTTCCTGCCTCAACTGGAGATGAGGCCCTCTTCCAATGCACCAAGCCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGGCTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGCCCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAATGATGCGCTCCCCCTCGCCACTCGCA TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 EMBV3_32041 GAGGTCAACCACGTGTTCTCCAACCTCAAGAAAGGCGTCCGCTTTGTGTCTTTTGAACAC Gene GeneID:508086|LOC508086:XM_002695042:356_cdna Constitutive 0 NULL GeneID:508086 18 GENE LOC508086 NULL similar to F-box protein 27 EMBV3_32422 TAGAGTTGGCTCTAAGAATGGAAACTCCAGACAGAAAGGAGCCCAGCCTCTGGGTAGCTC Gene BVT0102_119346 + 0 NULL GK000015.2:58609213-58823168 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061961 1 XLOC_037182 NonCoding TCONS_00061961 XLOC_037182 NonCoding NonCoding - 15:58655933-58665196 - TSS46038 723 2 TCONS_00061961_1 39 0.449515905947441 3 0.922263010148996 0.000263456783022073 0.000111182131872802 0.000405560120243597 1.40459483321883e-20 0.000192915687870227 1.05977054115707e-53 1.15046396910602e-119 0 8.50755467437766e-05 0 0 0 3.96856488967592e-06 0 0 0 0 0 0.000214071963761837 0.000175456328769227 7.55783547074939e-05 0 0.000279154835972325 2.3129132141187e-05 5.42706994999361e-05 6.28977837936291e-05 0.000648315032863159 0 0 0 XM_588706.5 LOC511385 PREDICTED: Bos taurus E3 ubiquitin-protein ligase NEURL3-like (LOC511385), transcript variant X2, mRNA. 1e-24 118 69.97 0.396957123098202 0 noncoding 0 0 0 0 0.0714782306754699 0.526570469209294 0.0418834606667751 0.435960331520999 CCTCAACCAAACTCGAAAGCAGGTCTCCGGCAGAGGAACCAACAGCATGCCCTAGTCTCTCCAGAGCTACCCAGAGGCTGGGCTCCTTTCTGTCTGGAGTTTCCATTCTTAGAGCCAACTCTAAGACTTCCTTAGAGTCTTAAGGAAAGTGAAAGTGGGGAGAAAGTAGCGACCCTGTTACAAGAGGGCACATTTTCCAGACATTCAGCACTTGTGTTTTTGTAGGAAATACAGTCAGGAGTAGCAGTTAATTGGGACTCCAACTGATCTGCATGATTCTACTTATGCGAAGAAGAATTGTTGTAAACTGCCAAAAAAGATCTTCTAGAAAATCTCTAAGTAGAAGGGCTGCTTTCCCAAGTTTGGTTAGTTTTAGAGGATTAAAAAAATGATTGATGACTTCCCTGGTGGTCCAATAGTTAGGAATCCACTTGCCAGTGCAGGGGACACGGGTTCAATCTCTAGTCTGGGAAGGTTCCTCATGCTGAGAGGCGACTAAGCCCACGTGCTGCAACGACTGAAGCCTGCGCACCCTGGAGCCCGTGCTCCACAACAAAGAACACCGCTGCAGTGAGCAGCCCGTGCGCCCTGGAGCCCGTGCTCCACAGCAAGGAACACCACTGCAGTGAGCAGCCTGTGCCCCGTAACGAAGTGCAGCCCCCACTGGCGGCAACTAGAGAACGTCTGTCCTTACACAAAAACCCAGTGTGGACAATAAATGAA TCONS_00059722 r 3' 45880 TCONS_00059722 r 3' 46326 EMBV3_18132 GCATCGAAGCCTCCTCGGACATTCAGTTTTACGTCGAAGATGGCCTACTTGTGTTCAGCT Gene GeneID:282643|LPLUNC1:NM_174697:758_cdna Constitutive 0 NULL GeneID:282643 13 GENE LPLUNC1 C20orf114 MGC142624 von Ebner minor salivary gland protein EMBV3_01446 CCCCAGACTGCTATGCAGTTTCATTATCCGCCTCAACTTTGGCATATCAAGCCCTGTGAT Gene GeneID:511017|DUS4L:NM_001101937:42_cdna Constitutive 2 NULL GeneID:511017 4 GENE DUS4L MGC155137 dihydrouridine synthase 4-like (S. cerevisiae) EMBV3_35515 GTACTGTAGCATATTTACCTACTATTTGCTAGCTCACAAAACACATAAAAAGAATTTATG Gene GeneID:518291|ZNF382:XM_002694951:81_cdna Constitutive 2 NULL GeneID:518291 18 GENE ZNF382 NULL zinc finger protein 382 EMBV3_27011 GTGACTATCACTGGCCTTGAACTTGGGAGGCAAGAAATGGCAAATAACCTGGTAAACTCA Gene GeneID:534359|CLVS2:XM_002690069:23_cdna UTR3_Alt 2 NULL GeneID:534359 9 GENE CLVS2 RLBP1L2 clavesin 2 EMBV3_34554 ACTGAGAGTGGGAACTCACTATGAATATAGATCACTGGCAGCGGCCGATTGGCCGTACGA Variant GeneID:536495|ATP10D:NM_001105628:26_cdna 218^282 2 EMBV3_03388 GeneID:536495 6 GENE ATP10D MGC160068 ATPase, class V, type 10D EMBV3_42458 GCGTAAGGCATCTGTATATTTGCGATTTCCACAAATTGCAGACCAGACCAGGCTTCAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21403 GCCAGACAGTATAGCAGGAATGAGCCCCTAACCTTCTCATGGTTACGCCGATATATTAAA Gene GeneID:505988|SUPV3L1:NM_001101862:284_cdna Constitutive 2 NULL GeneID:505988 28 GENE SUPV3L1 MGC151854 suppressor of var1, 3-like 1 (S. cerevisiae) EMBV3_31053 AATGTGGAATTTAGAAATCTATTTGGACTCTCTGGACTCTGGTCATGGGAAGGAGGTACC Gene GeneID:282227|FCGR1A:NM_174538:25_cdna Constitutive 0 NULL GeneID:282227 3 GENE FCGR1A CD64 FCGR1 FCGR1B MGC137713 Fc fragment of IgG, high affinity Ia, receptor (CD64) EMBV3_41133 GACGACCTGTTAAAATGACATCTTAGGGTAGAAAGATGTTTGAAAAAGTATTTGTGAGCC Gene BVT0102_262116 + 0 NULL GK000011.2:6209017-6213472 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33284 TTCAACCTGTGGACAGACTACTTGGGTTTGGCACGCCTGGTTGGGGCTCAGCGTGAAGAA Gene GeneID:523375|NANOS3:XM_002688742:78_cdna Constitutive 0 NULL GeneID:523375 7 GENE NANOS3 NULL nanos homolog 3 (Drosophila) EMBV3_04956 AAAGCCCGTGAGATCCAGGCCAAGCTAAAGTTTTGGCAAGGAGCTCTGCCAGGCCAAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15270 AAAGCACCAGCAAAGAAATGAGCTCACCATCCTCTGTTTCTAGACTGCCCAGAACTCGGC Gene GeneID:789298|RBM44:XM_002686576:29_cdna Constitutive 0 NULL GeneID:789298 3 GENE RBM44 NULL RNA binding motif protein 44 EMBV3_15882 GCTGTGTCCATCAAGGGCACTGGCCTATAGCTTTTGTTTCTGGTAATGTTCTTATCTGGT Gene BVT0101_071365 - 1 EMBV3_08401 GK000009.2:27992015-28046279 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234943 1 XLOC_144132 Coding TCONS_00234943 XLOC_144132 NonCoding Coding - 9:27990852-27994962 - TSS176260 2610 1 TCONS_00234943_4 105 0.446360153256705 2 0.365295692382575 2.35068811880932e-54 4.38868660947485e-05 3.5509931254825e-200 6.40135536179464e-05 0 3.24044821613881e-134 0 0 0.000184961090945735 0 1.75416522922477e-06 5.479980138491e-05 1.13849305101386e-06 1.80229441885077e-06 0 0.000293462244328666 0 0 0.000130727879764266 9.06826517775206e-06 2.32623151310285e-06 0 1.89553449042157e-05 1.71521153521659e-128 2.68955456886062e-05 6.12677899741017e-06 6.35651662292524e-05 3.68014424436492e-06 0 1.6124823092728e-05 XM_617403.7 TRIM24 PREDICTED: Bos taurus tripartite motif containing 24 (TRIM24), 5e-22 111 83.84 0.0375478927203065 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-33 149 69.41 0.126053639846743 0 noncoding 0 0 0 0 0.040004942971656 0.728078561087096 0.0208692941243262 0.686390822790419 CACTCCAGTATTCTGGCCTGGAGAATCCCATGGACTGTATAGCCCATGGGTTTGCAAAGAGTGGACACGACTCGGACACGACTGAGCGACTTTCACTTTAATCCAATGATTTACAGAAACTGTGAAAACCTCTAAGCAGTAGCTGGAGACCATAAGAGATTGCTCTAAGATTCCGCAACAGCATTCTGAGGCATAGATTATTTAATATGACTAAGACATCTATGTTACCTCTGTTTTGAGGTGAAAAATTTGTTAAGTCTATTACCAGGAACGCGGTGCCAGGACCCCTTGTTGCCCTGATCATCCTTGTTGACCCGGAAGCAGTTTCCGGCCTCAGCCTCCCAGTCCTCGCGATGCAAGAGCTCTGAACCCTGGAGCGTGCCAGGGCCTCCTGATCTTGCGCGGGATATTGTGAGCTGAATGGGCATGTGCACGCCGCCCGGCTCCGCCCCTGCCTTGGTACCCTGGACCTGCTGGCGGGTGGTGTCCGTGTGCTCCTGGCCCTGCCTCGGGTCGCATCCTCTTCTGGCCGCATCACGGAGGTGTCCACGTAGGCGGGACCAGGTGATTTCACTGATCAAGTCTATCCAACATTTAAAGAAAAATTAACAGCAGTCCTTCTCAAACTCTTCCAAAATATTGAAGAAAATAGACTGCTTTCAGATTCATTTCTTGAGGCCTGCAATATCCTGATACCAAAACCAGATAAGAACATTACCAGAAACAAAAGCTATAGGCCAGTGCCCTTGATGGACACAGCTGCAAAAATTCTCAAGAAACTATTAGTAAGCTGAATTCAACAATAGGTTAAAAGGCATACACCATGATCAAGTGGGATTCATATCTTGGATGCAAGGATGGTTTAACAACCTCTACATTAATAAAATAAAAGATAAAAGTCATATGATCATCTCAAAATGTGCAGAAAAAGCATTTGACAAAATTCGGCAGTAATTTTGAATTCCTCCTACAGTAGATGAGAGCCCATTTGTGTTCTATCAGGAAGGCCAGCTGGCTTTCATACTTGATTTTCAATTGCATATTAATGACTGTAAGCCTTTCATTTTCTTTTTTTTTTTTTGAAAATGTTACTTCACGCAATTTCTTATAATTACAATTTCCCACATACTTGTCAAATATCTGATAGAAGCCAGCTAGTGAATTCCCTAACTCAATTATACAATTCCAGTTTACCACAGATGGAAATTTTATCAATTAGGCTGCCACCAGTATTAATCTGTTCTCCACCTACAATTAGTGATGAAGCTCTTATTGCTATAGCCAGGCTACAACTGATGATTGGTGTTGCTCTAAAGCCTCAGTCCTGGTTATCAGCAGTTATAGGTGGCATGCACTGGGAAGCAGATTCTGGGATGGAATTTACCATTTATGGTATTGATTAGGAATTATCCTCAAAATATATACCCCTGGAAGGCAGAGGAGGGAAGCAGGATTGAGCAGAGAGAAAAGGCAAGCTGTGATGCAGGCCACTGTGAGTTTTGGCCAACGTGACAGAGAGCTCTGAAGCTTAAGTGGACTATCAGTGTTGTCACATTGAGCTCAAAAATCCAGGCATTCATGTGCTGACTTTGATCAGTCATAGTGTATGGGCTTCCTTGGAAGTGTGTCCCTTTCACTGAGACAACCCTTTACAACTGAGGCATTTCTGCAGGGTACTGGAGCAGTTGGGTGAGACATTGACTACAGGTGTCAGTTCTGTGTAACATGAATTTATAGGCTCCTGGAGTTACCAGTAAGGTGCTGATGTAATCCACTTGCCAAGTGTGTTCTCAGGGAATTCTTCCTAAAGCGATTTTCATGTGGTTTCTTTGTCTTCATATGAAGTACAGTCCTTTGACCCATTGGTGATTTCAGCAGGGGCAATGGAATTACATCATCATTTGATCCGCCTTTGCTTTGCTTGGGTGTCTTGTGCCATTTTGTCTTACGAACACAGAAAAATGTGGATTTTATTGGGGAACTCCTATCAGTGAACTAAGTAGCCTCTTTTACCTTGGTTTGAAAAGAATCAGAATTCAGAGCATGGAATGATGGGGGTAGCTGGATACTTAGTGGGCTCTACCACTGGTAGTGAAGCAGCCTGCTTACGCATATGTACTGAGGAACTCCCTCTGAACGTCAGCCCTGTCCCTTGTTTTCAAATGTACCTTTTGCCCTTTATCAGTGGGCTCTGTTTCCTCCGTCACTTTACCATTCCTCTGATCGTATCCAAATTATTATAGACCATTTTAATCTCAGGGTTATCTGATGTTCTCCTGTAGTGGGAGGGGTCTAGCAGTACTCAGTGGCAAGCTGGCTGTATTCCTTTGTAAAGGACATGAAAACATCTGCATCAGATTGCTCTCAAATCTGAAACTCCAGGAGTTTCCAGTGAAGAACAGTATTCAGTTTCTATCATATGTCCCAAATGACATGTGATCTGTTTGCGAGCACTTTTAAAATCAGCTGGGCATTTGAGCATCTTATCTTTCAGTATGATTTGATGAGTAATGCCTGGAACCCAAGCACGTGTAAATCTTTTTAACTTTTCCCTTCTCATGATCTCATTCAAAAGGGAATTCTTTCTTAATCCCTGTTAGTCTGTCTGTC TCONS_00234948 s 5' 0 TCONS_00234944 TCONS_00234948 s 3' 1501 EMBV3_43118 AGACAAAATGAATCTCTTCTCCCTCTGCCAGAAGATCGAGCAGTGTGACTACCCGCCTCT Gene GeneID:515816|NEK6:NM_001098988:23_cdna UTR3_Alt 2 NULL GeneID:515816 11 GENE NEK6 MGC149008 NIMA (never in mitosis gene a)-related kinase 6 EMBV3_05633 ACATCGACTTCCTCTACCAGGTCCTACAGAGCGACGAGCTGGACTCCAAGATGGCAAGCT Gene GeneID:782170|TWIST1:XM_002686684:94_cdna UTR3_Alt 2 NULL GeneID:782170 4 GENE TWIST1 NULL twist homolog 1 (Drosophila) EMBV3_25963 GCATAATGATTTGGCTGGGGTTTTTTGCGGTTTACTCCTCCCTCTGGCCCACTGTTCCTG Gene GeneID:536660|LOC536660:XM_002691859:158_cdna Constitutive 0 NULL GeneID:536660 12 GENE LOC536660 NULL similar to ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2 EMBV3_27885 TGGAAATATAAGGAAACTGAGTAGTGATTGGGCCACCTGAGGAAGGAGGCAAGGCCTGTG Gene BVV0102_153297 - 0 NULL GK000010.2:21771727-21779557 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013115 TCONS_00013123 TCONS_00016335 TCONS_00013117 TCONS_00013120 TCONS_00013122 TCONS_00013126 TCONS_00013119 TCONS_00013124 TCONS_00013121 2 XLOC_007997 XLOC_008707 Coding TCONS_00016335 XLOC_008707 NonCoding NonCoding - 10:21771939-21778801 - TSS11350 4044 2 TCONS_00016335_8 71 0.0707220573689416 3 0.411018801923918 8.32504909238469e-05 4.84679632216223e-05 1.72123044824803e-05 7.05822262550326e-06 0.000174094000662436 4.42267194673149e-06 4.65711729894533e-05 1.14438220038913e-05 2.43930900032815e-05 0.000372784055380672 1.45145482736815e-28 7.66948225957197e-27 2.41602741635216e-05 1.08461225019408e-119 2.56420070191607e-321 0.000483465247235439 0.000172599283454183 6.89218299822023e-06 5.41346951414147e-05 7.11318510125399e-06 0 0.000181350487602625 0.000195272834169865 0.000556797517925255 0 6.30815701865054e-05 3.51005635708298e-05 0.000101528638557072 3.5783794650463e-06 0.000184988401267265 XR_226859.1 LOC101907080 PREDICTED: Bos taurus uncharacterized LOC101907080 (LOC101907080), 0.0 6488 99.92 0.890702274975272 0 noncoding GCCTAAGTTTTCTTGTCTAACAGTTCTAGGGAGGCTCCGGAACTTAGTCTGAGTAGTCCATGACAAGGCGAAAAAGGTCCCTAGAGAACAGAGTCCAACTTGTCCCTTTGCCAGTGAAAAAACAGGCCTGGAGAGGAGTAGGGACCTGCTAGAATAATTCGGTAACTCAGTGATCAAGTCCCCATTTCCTTACCCCTTAATCCTGCAAGGAGCAGGCTGGAGGCTACATTGTGTGCCAAGAACTACTCTCAGCTGTGACCTGGGATGGTTCAAGGTGGGGCCCACCTCCAACAGGGAGGCCCACCAGCTGGGGTTTAATGGGGTCGTCCTGCACCTTCCCTGGCAGGGCCCCACCACCCCAGCTGTCACCTGCAAGGCCCGTGTGAGTACTGAAGCTGTCAGTGCCTCTCCTGGGGACGCCCACGCCTGCTGCTGCCTGAGCCATGAGTTTGAACAAAGAGCAGAGGCAGCAACTCCCCTCATGCCTACACAGAGGATACAGCTACCTGAGCATCTGGGGGCCAGGCCTCCACTCCACCTTACCCAGGTTCCCAGAGCTCGATGGAAAGAAGGATGTCTGAGTCCTTGCAGCTGAGGAGCAGCCAAGGGGAACCAGCCCAGCACGGGTGAGCTCAGAACAGACGGAAACTGAAGCCCTGCTCCTGCCAGACTTCGGAGAGATGGGGTCTTCTCTGAGAGCCTGGCCAACTCTTCATCCTCTCTGATCAAGGCCAAGTAAGAGCAGGCTGTTGACCTGGGCTGCCATTAGAGACCAGCAAAGGGGCCTGGAGCCGAGCTGCCTGAACCAGGTGAGTCCGAGTTGCAGAAGTGAAGTAATACCCAAGCTGACTCAGCTGATTTGTGGCAGAAGAGAGATCTGAACCACATGGTGGTGTTCCACGGTATGTTATTTCTGCTGCAGGGTGGAGGTACCCTGTCTTGGTCAGGTCTAGGAAGTGGGAGGAGGAGGCAGATTCTCAGCACCACTCATTTTAAACAAGCAGGTTTCAAGATGCTTGAAAGCTGATTGAAGTTCCCATCCTTTCTGGAATACTGGCAAATCTGACAAGTTCTCTGATTTCCAAGGTCATTGTTTCCCTTCTTTTGCAATCCAGCACTGACTGGCTCCTTTACAATCTTCATGCACCTCATCCACCCATTGCCCTCAAAAATAACTGCTTAATGGGTCTCCAGTAACTCCAGCCAACTCCTTAAGGGCTCTTGAGAGCAGATCATCTGGGAAAGCCAAGAAAACTCATCCAACTTTTAAAAGTGATCTTTGATCAGATCTTTTCTTGCCTCCATCTCCTCACATGACCTGAGTTAATTGGTCTACTTCACCTCACACAGAGCTCTTTCAATCAAGAACACATATTGAGAGCAATCAATTCTGGATACAGTGTATAAAAGTTGGGAGGGAAGAGGGGATAATTGAAGCCAGAAAATTCAGATACACAGCTTCTCAGACCAGAGTTCCTTTCCTGCATTCAGCTCATGCCTACTGACTTCACCTGGTTGCCAAGGAAACGTCAGTCTCTGATGGCGGTAGCAGCACTTTAGACAGAAAGCATCATAGGCTACCATGGTAACCGCAAAAAGAGTAAAGCTGCCTTCTCTTTTAGAAGGGTGAGGAAGAAATGAAAGAGGCTGCTGAGCTAAGCAGGCTACAGGGGATAGCTTTTGGAAAGCCTAGGTCTGACTTGAACTGAGAGGGGATTAATTTAACTCAACAGATATAAACTATGTGCAAAGACAACAATAATGAAAATAACACACCTAAGGTTGACTTCATCAAGATATAACCACCAAGTAACAGTTTACAAAGAACTGTAAATAAAGTCAGAATAAGAACTATAATAGGACCAAGAATACTGAAAGGAAAATAAATTTCAACTAGGAAAACATCAGTATCTTAAAGGACAGGATTTTTGACCAGCAGAAAGAATAAGACAGTGTAAGACAAGAAAGAACAAGACAGTAGACGTGGAGGTGGAAAAAGTCAAGACATACTGAGAAGTGTGGATATAGAGACAGAACAAGTGACACTTCCCCATGACTCCAAGGCTTTGGCTTTCACAGTGATGCTGAGAAGCAGGTTAAGATCAAGGGATCTGAAGCTAGACTGTCTGGACTGGGATCCCAAACTTGTTAATTACATCATCGAGGGACAAGTTAGTTAACCTTTTGGGTGTCAGTTTCCTCAGTGACAAAGTGAAGATGATAAAAGAATACTTCAGAGAGTCCTTGTGAGGATTAAATGACTAAAATGATTAGAGCAATGCCTAACCCACAATAAATGCTGCATAAATATAAATTCTCATTATTGTTAACCACCTCCCACCACTCACTTTTCAGAGCCAGGACAGCCTCTTCTCACTGTCCAAGTAACACTTCCTGATTCACACCAGACTTTAAGAGAAAAGAGAGGCTATGACAGAGTATCTTCCTTTAAGTTTTTATTAGTTCATTTCCCTTTTTCGTAAGTGCAAAACGCGAAGACTAAAGGTTCGTAAGTCACAGCACTGCTTCCATGGTAGCTCACATCTAGGAGTGGTTAGAGTCTAAGAAGGAAATAGGATGAATCCCAATGTCAAGAATACAGCAGTTTAAAGAACAGGGCTGCCTCAGAGAAGACAAAAGTGGAAGCTGTAAGCCAAAAGTCAGATGAAAATCCCCTTTAGAGCTGAGGATTGGTGGGGAAATCGTAACTGCACTGGGAACGGATTTGAACAGTCTCATCTCTACTCTCACCTTAAGCCACCATGCTCAGGCAGGAGGTTGAGGGAGGCTTCTTTACATTAGGCTGAGCTAAGGGGTTATCTACTGCCCCCTTCTCTACACTCCAACCACCTCCTATAGAGTTATGAGTAATAAGAAGGCCTTGAGTCACAGGCAGTGACACTGTCACCCATTAGATGCTGTCACCTTATATGGGTTAACACTAGAACAGAAGTTGTCTTAGACATCCCCTTACTTTCATCCTTGTCTTTCTCCTGCAAAATGTTACGTGAGGATCTGAGAGCAAGGAAGAACTGAGGTGGAAGGACCCACAGTGCAGGAAGGCAAAACAGCCAGGCATGGAAATATAAGGAAACTGAGTAGTGATTGGGCCACCTGAGGCAGGAGGCAAGGCCTGTGCGTACTTGTAGTCTGAAGGCATTTGAGACTGCCATGAGGAGACCTGGTCCACAACCTTAGGATGATGTATACAAATAGTCTGTACTGAGCTCAGGATGCATTAGCATCCCAATCAATAACTACATGGGGACTGGGCTACAGCCAGCTGCTCCTACCTAAAAATAATGCAGCCTCCTTCCCTTCTTCAGGTCCAGAGAGCAAACAAGGATAAGGAGGGGGTAGGGGTGACAGTGGGTGAGGTTGCAGCAGTCTAGAAATCCCTCCGGAGTCCCAGTGGCATTCTGTGCCACAAGTAGGTTTCATGTACTTAACACTTCAGTGTCAAGAGCAACCTCAGAAGCTCACCACCAAAAAACCAGCACTCTGTTTAGAAGCCTTAACTGACAAATTAAAAAACCTAGCAGCAATTATCCATATTTTTAGCATGACAATAAAGCCTTAACATTGTTGCCATAGAGACCAGTAAAGAATGGAGGCGGCCCACAGGAGGAAGACAGGTCTGAGGTTCAGCTCTGTCCCTGGAACCTCAGACCTTTTTCTCTTGGCTGGTCCGCAGCTGGTGACCCAGGCTCTGGGCTTGCCCCCTGTCCTAAGCCTTACAAAGCAGGCAGAGGAAGGTGTGCCTCACCTTTGGTAAGGCCATGCCTAGAACAGCTCCCTGGAATGCATGATCAGCCCAGGCCTGTGTTGTCCCAGGCTGAGCCATACGGGAAGCAAGAGTTGAGGGGACTGAAAGGACGAACAATTACAGACCTAAGGCCTAGGGGAGCCCTGATGTATAATGCCCAAACCCCTTTGGATACTAGATTGGATTTCTACACAAAGAGGTCCAAAGGCAGGCCACAGGGTAAGAATGGTGAGCTGAGGAGGCTTCTTTAGTACTTACGCTTCTCAGGATCACAACCC TCONS_00013126 r 5' 0 TCONS_00013126 r 5' 0 EMBV3_34962 AATATAGATATCCATGCATCAGATAAAAGTGTAATATAACATTACGAAGCAAGATGGGTA Variant GeneID:531996|LOC531996:XM_002686772:85_cdna 634^775 1 EMBV3_14715 GeneID:531996 4 GENE LOC531996 NULL similar to Expressed sequence AI847670 EMBV3_34731 TGCAAGACCATTCTTTTTGTTCACCTCCAAATATGAACTTGTGTGAGGAGCAGCAATCCC Gene GeneID:615896|SYCP3:NM_001040588:76_cdna Constitutive 1 NULL GeneID:615896 5 GENE SYCP3 MGC127286 synaptonemal complex protein 3 EMBV3_14810 CTTCTACAAATGCACTGCAAAAAACCTCCTGGGCAGCGACTCTAAGACCACCTACGTCCA Gene GeneID:786844|MXRA5:XM_002700420:5_cdna Constitutive 0 NULL GeneID:786844 X GENE MXRA5 NULL matrix-remodelling associated 5 EMBV3_20333 GGGCTTTACCCAGCGGTCAAATCTTCAAATCCATCAGAGAGTGCATACAGGAGAGAAGCC Gene GeneID:100140999|LOC100140999:XM_002693140:42_cdna Constitutive 0 NULL GeneID:100140999 15 GENE LOC100140999 NULL similar to zinc finger protein 214 EMBV3_11914 GAGAAACGGTTCACCTGGAGCCCATCTAAGGATAGAGAAACGCCACCGCGAGGAAAAAAA Gene BVV0102_300580 + 1 EMBV3_17832 GK000030.2:142525374-142639477 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248592 TCONS_00248595 TCONS_00248591 1 XLOC_151641 Coding TCONS_00248591 XLOC_151641 Coding Coding USP9Y X:142510586-142607949 j TSS185881 3115 3 TCONS_00248591_5 281 17 0.968180604342557 1.47734238678979e-10 5.47639710304087e-11 3.22573237732616e-14 1.11494669349122e-15 1.57812129863724e-11 1.05066233367568e-10 3.56167684955756e-16 1.46149759481923e-15 5.66557578226831e-08 7.38406073953454e-10 0.00011104051032129 3.68824502429956e-05 4.78672275834277e-05 1.47984441615243e-10 9.9374894448067e-08 0.00131292609577901 0.000671205310171612 0.000514787185213404 4.3774531029304e-17 1.00304701580179e-08 3.32915428176213e-11 0.000586753801822255 3.21342648153951e-05 0.000452603759447529 3.18008989285521e-12 4.1393986197052e-10 3.64453395207059e-66 8.20932045562734e-05 0.000498662902034912 2.65190093771119e-09 NM_001145509.1 USP9Y Bos taurus ubiquitin specific peptidase 9, Y-linked (USP9Y), mRNA. 0.0 1792 100.00 0.318459069020867 NM_004654.3 USP9Y Homo sapiens ubiquitin specific peptidase 9, Y-linked (USP9Y), 0.0 1452 92.45 0.318459069020867 TCONS_00248591_5 sp|Q93008|USP9X_HUMAN USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X; 0.0 568 98.57 0.98932384341637 0 coding 0 0 0 0 -0.00193278150195019 0.990002900622366 0.01684988881915 0.771407290232997 AGAGGGGGGGCTTCGAGAGGGCGGGGCGGCACGGCGCGGCGTCATATTGGAGGCTCCGACTGGCGCTGAGGCTGGTGGGAGTTTGCGCCGCCGCGGTTGCCGCTGTTCGGCCGTTTTTTTTTTGGCTTGCCGGATCCGCCATATTGAAGAGGGCCGGGGCAGGCGATTTCTGGAGCTCCAGCGTCCCGGTGTCCCGCCCTTAAGGGGTTTTGTGGAACCCAGCCCCATTAAGCGTCACTCAGCTCCCAGGCCTTTCAGGATCTTGACTGCTTGTGTTGCCCTCTCCTTTACGGGAGACTGCCGCCTTAGCGGCTCATTTTAGTGTTGGAGTTGGCAGCTAGGACCGAGTCGGAGTGAAGAGACTAGGCCCTAAAAGGTGAAACCGCAGCTGCGGGAGCATTAAGCGGACGTTAAACAGGAGAAACGGTTCACCTGGAGCCCATCTAAGGATAGAGAAACGCCACCGCGAGGAAAAAAAGAGGTAGTGAAATGGTCTCTTCAAGAATGGTCTGTCCTTGAATTGGAGATATTTGAGGCTGATATATCCTGGTGCTTCGTCTCCTATAAGTGAACTGTAATTTCTTCTCTTACAACAACTAAATAAACAGACAAAATAGCAAAAATCTTTTCTGTTTTGAGTATGACAGCCACTACTCGTGGCTCTCCAGTAGGAGGGAATGACAGCCAGGGCCAGGCTCCTGATGGACAGTCTGAGACCCCCTTCCAGAATCAGACCTCATCACCTGATTCTTCCAATGAGAATTCCCCAGCAACTCCTCCAGATGAACAAGGTCAAGGTGATGCTCCACCTCAACATGAAGATGAGGAACCTGCATTTCCTCATGCTGACCTGGCAAAGTTGGATGACATGATCAACCGGCCTCGTTGGGTGGTTCCAGTTTTGCCAAAAGGGGAATTAGAAGTGCTTTTAGAAGCTGCTATTGATCTTAGTAAAAAAGGTCTTGATGTTAAAAGTGAGGCATGTCAACGTTTTTTCCGAGATGGGCTAACAATATCTTTCACTAAAATTCTTATGGATGAAGCAGTGAGTGGCTGGAAGTTTGAAATTCATAGATGCATTATTAACAATACTCATCGCCTAGTGGAACTTTGTGTGGCCAAGTTGTCCCAAGACTGGTTTCCACTTCTAGAACTTCTCGCCATGGCCTTAAATCCTCATTGCAAATTTCATGTCTACAATGGTACACGTCCTTGTGAATCAGTTTCCACAAGTGCTCAGTCACCTGAAGATGAATTATTCGCTCATTCCTCAGATCCTCGATCACCAAAAGTGTGTTGACCATTTGGACAATGCTATGAGTTTCTCAATCAACATACAGTGAGAAAGTACTTTATTCCAATTATAGAAATAGTTCCACAATTTTTAGAAAATTTAACTGATGAAGAGCTGAAAAAAGAAGCAAAGAATGAAACTAAAAATGATGCCCTTTCAATGATTATTAAGTCTCTGAAGAATTTAGCTTCAAGGATTCCAGACCAAGAAGAAACTGTAAAAAATTTAGAAATTTTTAGGTTGAAAATGATACTCAGATTGTTGCAAATTTCTTCTTTTAATGGGAAGATGAATGCCCTGAATGAAATTAACAAGGTGATTTCTAGTGTATCATATTATACTCATCGGCATGGTAATCCTGAAGAGGAAGAATGGCTGACAGCTGAGAGAATGGCAGAATGGATACAGCAGAACAATATCTTATCCATAGTCTTGCGAGATAGTCTTCATCAACCTCAGTATGTAGAAAAGCTAGAGAAGATTCTTCGTTTTGTGATTAAAGAAAAAGCTCTTACGTTACAAGATCTTGATAATATCTGGGCAGCACAGGCAGGGAAACACGAAGCCATTGTAAAGAATGTACATGACCTTCTGGCAAAGTTGGCTTGGGATTTTTCTGCTGAACAACTTGATCATCTTTTTGATTGCTTTAAGGCAAGTTGGACAAATGCAAGTAAAAAGCAACGTGAAAAGCTGCTAGAGCTGATACGACGTCTTGCAGAAGATGATAAAGATGGTGTGATGGCACACAAAGTGTTGAACCTTCTTTGGAATCTGGCTCATAGTGATGATGTGCCTGTAGACATCATGGACCTAGCTCTCAGTGCCCACATAAAAATACTAGATTATAGTTGTTCCCAGGATCGAGACACACAAAAGATCCAGTGGATAGATCGCTTTATTGAAGAACTTCGCACAAATGACAAATGGGTAATTCCTGCACTGAAACAAATAAGAGAAATTTGTAGTTTGTTTGGGGAAGCACCTCAGAATTTAAGGTCGTAATTCAGAGTAATGATGATATTGCCAGCAGAGCTATAGATCTCCTTAAAGAAATATATACAAATCTTGGCCCCAGATTACAGGTCAATCAGGTGGTTATCCATGAGGACTTTATTCAGTCTTGCTTTGATCGTTTGAAAGCTTCATATGATACATTGTGTGTTTTGGATGGTGACAAAGACAGCATTAACTGTACAAAACAGGAAGCTGTTCGAATGGTTCGAGTATTGACTGTTTTAAGGGAATACATAAATGAATGTGATAGTGATTATCATGAGGAAAGAACAATTCTACCTATGTCAAGAGCATTCCGTGGTAAACATTTGTCTCTCATAGTTCGGTTTCCAAACCATGGCAGACAGGTTGATGATTTAGATATATGGTCTCATACAAATGATACTGTTGGTTCAGTACGACGATGTATTCTCAATCGTATTAAGGCAAATGTAGCCCATACAAAAATTGAACTCTTTGTGGGTGGTGAATTAATAGATTCTGAAGATGACAGAAAGCTAATTGGACAGCTGAACTTAAAAGACAAATCAATAATTACGGCCAAACTTACACAAGTAAGTTGCAATATGCCTTCCAGTCCTGATAGTTCTTCTGATTCCTCAACTGGATCTCCTGGGAACTATTGTAAGCGTTACAGTGATGGCCCTAAACAAGAAGTGGAAAGTTGTTTGCCTGGGGTGATAATGTCACAACATCCCAGGTACATTTCTTTCCTTTGGCAAGTTGCTGACTTAGGTAGCAATCTGAATATACCACCTCTTAGAGATGGAGCCAGAATACTTATGAAACTTATGCCAATGGGTA EMBV3_14675 TGTAAACAGGTAACCAGCAGTGAGGACCTGCTTTTATCCCAGTTTATTTCTCCATTTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16536 GAGATAGGTATCCTGGTGGAGAAAGCTCAGAAGCTGCAGCAAGAGCTGGAGTTCCTGGAG Variant GeneID:510029|PSMC4:NM_001035083:583_cdna 79^176 1 EMBV3_04744 GeneID:510029 18 GENE PSMC4 MGC127979 proteasome (prosome, macropain) 26S subunit, ATPase, 4 EMBV3_10550 TCCTCAACGTGCTGGAGATCTACCACCTGGGCTGGAAGAAGCTGAAACAGGGGATGACCA Gene GeneID:100140301|GJA3:NM_001166296:5_cdna Constitutive 0 NULL GeneID:100140301 12 GENE GJA3 NULL gap junction protein, alpha 3, 46kDa EMBV3_35891 GCGGCGATCACTCCTCTTCAGCTAGAAAAATGGCGATGTTCAGGAACTTAAAACTTCTTC Gene GeneID:777692|LOC777692:NM_001078152:333_cdna Constitutive 0 NULL GeneID:777692 25 GENE LOC777692 MGC151965 hypothetical protein LOC777692 EMBV3_08388 TATCCCTTACACCAGCTCTCACAGGATAAGGCTGTACGAGAGAGATGACTACGGAGGCCT Gene GeneID:100335856|LOC100335856:XM_002685543:139_cdna Constitutive 0 NULL GeneID:100335856 2 GENE LOC100335856 NULL rCG22235-like EMBV3_18449 ACCAGGTCTTAGCTGGTGGGGCGCACAATCTTCACTGCAACATGGAAACTCTTAGTTGCA Gene BVT0102_169189 + 0 NULL GK000024.2:32049401-32570074 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22208 TTCATTCAGGAATTGAAGTATATGGCAGAGAGAAGCTGTTGTTTTAGGGAGCACTGACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38228 ACAGCCTGCTTTTGTTGGCTAAGCTTTCAGTGTTTCAGTGTGAAGCATAAGCGGTGTACC Gene GeneID:504716|AHCTF1:XM_002694006:316_cdna UTR3_Alt 2 NULL GeneID:504716 16 GENE AHCTF1 NULL AT hook containing transcription factor 1 EMBV3_37634 GGAGGGGTGTATGAGCCATGGATGAGAGTCGATAGCCAAACGAAGAATGGGGAAATGACC Gene BVT0102_181447 + 0 NULL GK000003.2:121265816-121271986 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42170 ATCCCAACCTTTCCTCTCCCCGCTTCTATCTAGAGCTACTGCGGTTCTGACAGGGGTGTT Gene GeneID:540155|GANAB:XM_002699286:219_cdna Constitutive 1 NULL GeneID:540155 29 GENE GANAB NULL glucosidase, alpha; neutral AB EMBV3_01011 TCTACAAACCTCATGCTATAAGCGGCCTGCAGATTGGGTCCCTTTTGTCTCATGCTGTGG Gene BVV0102_147230 + 0 NULL GK000005.2:111844170-111871464 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193445 TCONS_00193444 TCONS_00193447 1 XLOC_117482 Coding TCONS_00193447 XLOC_117482 Coding Coding GRAP2 5:111824373-111846579 j TSS144574 3593 1 TCONS_00193447_2 316 0.0879487893125522 8 0.838549876154019 6.88368972066196e-06 3.06434628060904e-07 0.00113033608982589 4.28763780014956e-06 2.58050942841116e-06 0.000677608875664294 0.000601588216511941 0.000724426794163429 0.0019035776925419 1.99587521160046e-06 1.17413983682701e-05 8.59168981792513e-37 0.000173386959626143 2.35853525251201e-06 2.59949981836562e-06 1.7127299893497e-05 1.53797009255309e-06 0 1.13529159928671e-06 0.00243251378543591 5.45309071727083e-07 0 0 0 0.00201331854594697 3.88934252533735e-06 0.00133044288591456 7.11866489195139e-06 9.40635537583141e-07 1.51376441036499e-06 XM_005207393.1 GRAP2 PREDICTED: Bos taurus GRB2-related adaptor protein 2 (GRAP2), 0.0 4672 100.00 0.720567770665182 XM_005261837.1 GRAP2 PREDICTED: Homo sapiens GRB2-related adaptor protein 2 (GRAP2), 0.0 1326 73.39 0.629000834956861 TCONS_00193447_2 sp|O75791|GRAP2_HUMAN GRAP2_HUMAN GRB2-related adapter protein 2; 0.0 545 82.12 0.996835443037975 4 coding 1 0 1 1 0.0874811972534315 0.434595970712078 -0.0591905281632707 0.37166580206647 GAGCAGTCCTTCCAGCCCCTCAGGCCCCAAGCTTCACGTTACAACATGGAAGCCATTGCCAAGTTCGATTTCATGGCCTCGGGAGAAGATGAACTGGGCTTCCACGCTGGCGATGTTCTGAAGATCCTAAGTAACCAAGGGGAGTGGTTCAAGGCGGAGCTTGGGAGCCAAGAAGGATACGTGCCCAAGAATTTTATAGAAATCGAGTTTCCTGAGTGGTTTCACGAAGGCCTCTCACGACACCAGGCAGAGAGCTTGCTGATGGGCAAGGAGCTTGGTTGCTTCATCATCCGGGCCAGCCAGAGCTCCCCCGGGGACTTCTCCATATCCGTCAGGCATGAGGATGACGTTCAGCACTTCAAAGTCATGAGAGACAACAAGGGTAATTACTTCCTGTGGACAGAGAAGTTTCCATCTCTCAACAAGCTGGTGGACTACTACAGGAAGAATTCCATCTCCAAACAGAAGCAGATCTTTCTGAGGGATAGGACCCGGGAGGAACAGGGTCAGCGGGGCAACAGCCTGGACCGGCGGTCCCAGGGAGGCCATCCCCTGAGCGGGGCTGTGGGAGAAGAAATCCGGCCTTCGATGAACAGGAAGCCGTCGGATCACCCCCTGCTCCCTCCTTCGCAGTATCCCCCGGCCCCACTGCCGGCGCAGCAGCGGTACATGCCGCAGCATCATTTTAATCAGGAACGCCGTGGAGCCAGCCTGGACATAAACGATGGGCCCTGTGGCCTGGGCATGAGCACCGAAATGAATGCCGCCCTCATGCACCGGAGACACACTGACCCAGTGCAACTCCAAGTGGCTGGGCGGGTGCGATGGGCCCGGGCGCTGTATGACTTCGAGGCCCTGGAGGACGACGAGTTGGGCTTCCGTTGCGGAGAGGTGGTTGAGGTCCTGGACAGCTCCAACCCCTCCTGGTGGACCGGCCGCCTGCACAACAAGCTGGGCCTCTTCCCTGCCAACTACGTGGCACCCATGATCCGATGAGGCCCTCTGGAGGGGATGGAGGCTTTTGTCTGAAGCTGCCTGCCTGCAAGGGACGGGGCAAGGAAGAAAAGCTTTGAACTACACACACATACATGTATATATATATGCGTGTGTATATGTTCATATGCACACGCATATATATGCCCATGTGTCCACACATTTTTAAATAGTAATTTATTGGCAAGTTAGTTGCTTACTTAGTCGATGTGAAAGGAACTCAGGTGGAGATTTATATTCATAGTTATTTTTCTACTCCCCTCAGCTGGTGTGCGGAAAGAAGGCAGCGGGGGTGTTGGGAAGCGGGAGGCAGGGAAAAGAAATCCAAACGCTTCCTGTCCTCAAGTCAGCATGGCTCCCTCCTCATCTCAGAAATGCTCGCTGAGAGGAGCTAAGCAGGTCCGCATCTGGCGCTGGACACGGAAAAGCAGGGCGGGGCTGGGCTTGGCGGGGCTTGTTCTAGTTTATCTGAACGTCCTGCTTCTCCCCCGCCCTAGGGTGGGTGTGTGGGCCCCTGACCTCCTCTCCCGCCAGGGTGGGCACTGCTGGGTGGAGGATGAAGGCACAGAATTGAGCTGGGCGCACGGAAGGGGTGCAAGGGGAGGGCTGGAGCAGCAGGGGGTCCCGGAGCCTGGGCAAGGCTGGCCCCCCTGGCCAATGCTCCCTCAAGCGAACATTCCTCAGCTAATCCTCTCGCCTGTGGCTGACGTAAAGAAGCGGAGACACTGAGAGCCAAGCACTGTTGGGAAACGGTGGGGTTTCTCACAAATCCCTCACTGGCTTTCTTGGGTGTAACCTCCATTTCCCCCTGCAACCAAGAAAGCAGCGTCTTAGCCTCTGTAAGGCGCTTGGAGAAGGCCCAGCTGAAGATGGTGGACTTTAGAACTACTGTTTCGTGGTTCCCAGGGTGTCTCTTCAGGGCTCTGTTTCTTTCCCCTCTTGGTTTTCTGTATTTTGAAGACGCTTTGCCCAGCGGCACAGAGAGACGCCCATCCCTCAAGAACGTTGTTTAGCGCCTCATGGACCGATTGGCCGTGACCCTGGGTGGCGGGGGGCTTTGAGAGAGCTTCCTGCTCCTCCGACTGTGGGCCCGCTGCTGGCACCTCCCGAGCCCACGAGCTGCACCTGAGAAGGAACCCCACTGCTGCTGTCTCTCCTTCACCTCAAAATAGACTCCTGTCTCCCAGGGCTCACCTAGGGGCGTGAAGCACAGAGCAGGCTGGCTGGGGGGCAGGGAGGGACGCTGGAGGAGGACGCCCAGGGTCTTAGCAGAGCAGGAACAAACCTGTCTGCCCCGGGCACCTAGGGGGCCAGTGTGTGTGTTGGTGGCGGGGGTCCTGAGACATGAAGGAAAGGGCTGGGGCGGAAGGGATGGTGAGGGAACATGGGGCTGGGAGGCGAGGGGGGACGGACCTGGGGCTCTGTCCTCGTCCCACCCGTCCTGCTCTGAGGAGGGACCAGGCAGCCTCCACCCAAGGCACTGAAGAAGCGTTTCTGACTCAGAAAGTCAACTGTCCATGTTAACGCAGGCTGTCTTGGACTCTGAAATCTCTCGTTCTCCTGTCGCCTTTAAAGAAAAGGGGGAAATGAAAAAACTCTGTGGTGGATCTTGGGAGGGAAGAGAAAAATAGCCCTGAGAGGTAGGGGGGGGGGGGGGCGGGGGTGAGAGTGAGGAAGCCGGCCTTAGGAAATGAAAGTGCGGGGAGGGAGGAGGGAGTGGAGACATTTCAAAAGATCCCGGAGCAGCGTGAGAGGCTGGAGGGGTGGAGGAAGACACTGGAGTGATGGGTCAGGGGGCAGACAGGGCGCAGGCAGGAGGGACCCGAGGCTGGTGGGCAGGAGGGACCGGGCAGAGAAGACACGGCAGGACCAAAGAACAAAGGCCAAGGAGCCCTGATAAATGTTCCAGTGCTGAGCAATGTGAACAAGTTACAGTAAATAAAAGCCAAAAGTAGTGTTTGATTTTACAGTATTTACAAACCTCATGCTATAAGCGGCCTGCAGATTGGGTCCCTTTTGTCTCATGCTGTGGGAAGACCAGTCCCAGGGAAGATAGAGGAAAACAACTTGATTCTAGCCTGGGTTTTGTGCCTTGAAACACTCCTCAGGAGAGCGGTCATATTAATAAAACACAATGCCTTTGTTTTTCTGGGCTGGGTCTGGTGTCTGTGTCACATACCCCTTGGGCAGAGGGCAGGAGTCACTGACCTGGAACGGCTGACCACACAGTGTGGGTAAAGCTTTCAGAACCCCTGGATCTGGACCTTCTGTTCCACCAAAGCTTTTATTTATTTATTTTTTAATTGAAGGATAGTTGCTTTACAATATTGTGTTGGTTTCTACCAAACATCAACATGAATCAGCCATAGGGTTACCTATGTTCCCTCCCACTTGAACATCCCTCCCATCTCCTACCCCATCCCACTCCTCCAGGCCCCGGGTATGAGTTCCCTGAGTCACACAGCAAATTCCCATTGGCTATCCATTTTGGATGGTATCACCAACTCAATGGACATGAATCTGGGCAAGCTCCAGGAGATGGTGAAGGACGGGGAAGCCAGGCGTGCTGCAGTCCATGGGGCCGCAGAGTCGGACATGAC EMBV3_10832 AGCTTTGATGAGCTTGGATATATGGACGTGATGAATGGCCCCCATCTTCCCTGACCGACC Gene BVV0102_118696 + 0 NULL GK000025.2:39347048-39354516 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145598 TCONS_00145602 TCONS_00145599 TCONS_00145601 1 XLOC_088875 Coding TCONS_00145598 XLOC_088875 Coding Coding ACTB 25:39343601-39348804 j TSS109075 3084 1 TCONS_00145598_2 195 5 0.408112264513649 0.00011199965139502 0.000100075861129043 8.91839536078161e-05 7.56979483627237e-05 4.38359255623194e-05 1.62933951571482e-08 3.05882962498804e-05 0.00062716373623513 6.78197025355163e-05 6.74051311158187e-05 3.00817483703709e-05 2.05110948445943e-05 0.000126543051020919 0.000116066763558055 2.67676350421731e-05 0.00245873026143846 0.00057163320715445 0.00113658117787344 4.10999434121129e-05 0.000121118771089594 4.33858819277841e-06 0.000807593482827158 0.000425853561859904 0.000991697388822966 3.09532407211833e-05 9.12875501939793e-06 7.79653543115012e-06 5.30337816824836e-05 9.60236383677198e-05 0.000333457164263902 NM_173979.3 ACTB Bos taurus actin, beta (ACTB), mRNA. 0.0 1963 99.55 0.357652399481193 XM_005249818.1 ACTB PREDICTED: Homo sapiens actin, beta (ACTB), transcript variant X1, 0.0 1404 88.29 0.356355382619974 TCONS_00145598_2 sp|P60712|ACTB_BOVIN ACTB_BOVIN Actin, cytoplasmic 1; 5e-70 221 93.75 0.564102564102564 1 coding 0 0 0 0 -0.0710139525662835 0.57913018030268 -0.016887480716513 0.739375379168831 CCTATATAACCCAGCGGCGCGAGGCGCAGCCACCGCCGAGACCGCGTCCGCCCCGCTAGCACAGGCCTCTCGCCTTCGCCGCTCCGCCTTCGCCGCCGGTCGACACCGCAACCAGTTCGCCATGGATGATGATATTGCTGCGCTCGTGGTCGACAACGGCTCCGGCATGTGCAAGGCCGGCTTCGCGGGCGACGATGCTCCCCGGGCCGTCTTCCCGTCCATCGAGAAGCTCTGCTACGTGGCCCTGGACTTCGAGCAGGAGATGGCCACCGCGGCCTCCAGCTCCTCCCTGGAGAAGAGCTACGAGCTTCCTGACGGGCAGGTCATCACCATCGGCAATGAGCGGTTCCGCTGCCCTGAGGCTCTCTTCCAGCCTTCCTTCCTGGGCATGGGAATCCTGCGGCATTCACGAAACTACCTTCAATTCCATCATGAAGTGTGACGTCGACATCCGCAAGGACCTCTACGCCAACACGGTGCTGTCCGGCGGGACCACCATGTACCCCGGCATCGAGGACAGGATGCAGAAAGAGATCAATGACCTGGCACCCAGCACAATGAAGATCAAGATCATCGCGCCCCCTGAGCGCAAGTACTCCGTGTGGATTGGCGGCTCCATCCTGGCCTCGCTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTACGATGAGTCCGGCCCCTCCATCGTCCACCGCAAATGCTTCTAGGCGGACTGTTAGCTGCGTTACACCCTTTTTCTTGACAAAACCTAACTTGCGCAGAAAACGAGATGAGATTGGCATGGCTTTATTTGTTTTTTTTTTTTGTCTTTTTTGATTTTTTTTTTTTTTTGGCGCTTGACTCAGGATTTAAAAACTGGAACGGTGAAGGTGACAGCAGTCGGTTGGATCGAGCATTCCCAAAGTTCTACAGTGTGGCCGAGGACTTGATTGTACATGGTTTTGTTTTTTTTTTAATAGTCATTCCAAATATCGCGAAATGCATTGTTACAGGAAGTCCTTTGCCTTCCCAAAAGCCACCCCGCTTCTCTCTAAGGAGAAGGGGCCAGTCCTCGCCCGAGTCCACACAGGGGAGGTGATCGCTTTTGTGTAAATTATGTACTCCAAAACAAATTTTGTTTTTAATCTTCGCCTTAATACTTGTTTTTTTTGTTTGTTTTATTTTGAATGGACAGCCATCATGGACCCCTTTTTTTGTCCCTCAACTTGAGATGTATGAAGGCTTTTGGTCCCCTTGGGAGCGGGTTGAGGTGCGGAGGCAGTCAGGGCTTTCCTGTACACTGACTTGAGACCAGTTCAATAAAGTGCACACCTTAAACACACAGCTCCTGGTTGGTTGTTGGGTGCTGGGGACAAGGATGGGGCAGTGGGAGACACCTCTTTCCCTGGGGGTTCTTGGAGGGTCATGGGGGAGGAGTTAAGGATTCTAGCCTCTCATGTTTGAGATAAATTCCTTGGCCTGGCCCTAGTATCCCCATTTCTCACTGGTTCTGATATTGAGATGCTTGAATAGTCGGGAGGCCTGGAGTTGGGAGTCTTTATGCCCACCTCCTGTGATTGGGTGGGGGGACCTTTGTGACTTTTTATCTTGGAATGGGGGCACGGCCTCCAAAAGTCAGAGACTTTGTCCTCACCTTCAGAACCTGAGGCTGAGCCCAAGGGCAACACCTGCCCATTCACCTGGAGTGACCCCCACAGGAGGGGGATCTTCCTATAGGTCCGCAGGGCACCCACCCCAACCTGTGGGTGAGGGGCTGTGGGGTTGGCAGAGATGGCTCTGGGCGCACTTGGCCAAGGTCTGGATCTGTTCTTGGGACTGGAGGGTTCCCAATTTCAAGTGCAGGTTGCCCCAGTTCTCCCAAGACCCTGTTGGGGGGCCACAGCCCGCCTCTCAGCTGATTCCCCACTCCTGGAGGGCGTGGTCTGCCTGGCACCTCAGGTCAGTCTGGGGCTCCTCTCCAATCCTGGCTGGCCTCTCCTCTGCTAGAAGCTGCAATTGACACGGAGGGAAAGGGGTGAAGTTCCCCTATGAGGGATGTGCCCCCCATCTCTAGAGGGAGTGAGAGGCACAGAAATTGACCCCCAAGTCAATCCAGATAGGCAGCCTTGAGGGGGGCCCCCCTCCATGAATCTGGGTGGGGGGTCCCTCCAGCACTCCACTAGGAGTTGTGGCCCCTGGGGGCGGAATGACACACCGCCTCCCATCTCCGGGAGAAACAGTGCAGACCCTCAGGAATGTACTTTTGCTCAGCATCTTGAGGGGCTGTGGTCAACTTCAGGTCTGGAGGAACAGGAGAAATGTGAGTGCAAGGTGGTTATCTTTGCGCTGGGAAGGGGACTGATTGACCTCCTGATGGCTTCCAAAACCAAACAGGAGCCCACAGTCCTGGGCTTGCCGGGCAGGTTTTCCTGGGTCAGTACATGAAACGGCAGGCGGGTGCAGAGCGTGCCATCCGGAAGGGGTCCTGTTCTCCAGGGCATCCCAGACCACCTCTTTTACCTGGCCCAGAGGAAGAGCAGGACGCCAAGGACAGAGGCTCAGAAAGCAGGGGCTGAGAAGGGAAGTCCCTTCAGGGTCGGGTCAGTTCTAGTTAATTCTTCTGATCTAATTCTGGGGTGGTGGTGAGTCCTGGACTCTGGGAGCTACAAGTTAAGTCTCCACCTTGGACTGCTTCTTCATTCCTCAGGTAAGAGTTGGGTGCCTACTGTATGCTGACGCCTTGGACACAGACCCAGCCCTGGAGGAGCTGTCAGTCTGGAAATTCCTCTTACCGCTCCCCCTTTCCTTTTCTTCCTCCCTCCCTGCCTTCCTTCTTCCAAGCACTGTCTGTGCCCAGAATGGGCTGCAGTGGAGAAGAAACCAGCTGTTTCCTACCCTCATGAGACATCCCATTCACTGGGGAAGATAGAATAAATAGGAACGTACCACGCCCAGTGGCAGTGAGAAGAAAAAAGTGCAGAGGCTGAGTGAAGACCACAGGGTCGGTCAGGGAAGATGGGGGCCATTCATCACGTCCATATATCCAAGCTCATCAAAGCTAAAAAAAAAAAAATACAGGTAACCAAAAAAAGCAGCAGT EMBV3_00432 GGGACACGACTGAGTGACTGAACACTACTACTGCTACTAAAGTTGACTTACAGTGTTGTG Gene BVT0102_079592 + 1 EMBV3_11970 GK000007.2:19025594-19043741 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04737 CCGGTCACCAACGGGACCAGCTCGGCCCAGGATGGCAGCACGTGGAAGCGAGATCCTTTT Variant GeneID:768005|SLC9A3R2:NM_001077065:327_cdna 516^578 1 EMBV3_38694 GeneID:768005 25 GENE SLC9A3R2 MGC133988 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 EMBV3_40117 GGTGTTTGCAGAAAGACACTAAAGCTGAAGTGAATAGAATTGGCCTGCATACAGAAGGAG Variant GeneID:613425|UROS:XM_002698565:86_cdna 650^724 1 EMBV3_43561 GeneID:613425 26 GENE UROS MGC139765 UROIIIS uroporphyrinogen III synthase EMBV3_19573 TCGAGAAGAGCAAGGCCAACCACTTCCTGATCCTCTTCCGCGACTCAAGCTGCCAGTTCC Gene GeneID:616206|LOC616206:XM_002688855:201_cdna Constitutive 1 NULL GeneID:616206 7 GENE LOC616206 NULL similar to Uncharacterized protein KIAA1543 EMBV3_10941 CATTCAGAGTGGGTGTCTTGTGTCCGCTTCTCGCCCAACAGCAGCAATCCCATTATTGTT Gene GeneID:327682|GNB2L1:NM_175802:5_cdna Constitutive 0 NULL GeneID:327682 7 GENE GNB2L1 RACK1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 EMBV3_38205 CGGGACTCCTTAACCGAAATCAACCTGTCAGACTGCAATAAGGTGACTGACCAGTGCCTG Gene GeneID:614487|KDM2B:XM_002694489:350_cdna Constitutive 0 NULL GeneID:614487 17 GENE KDM2B FBXL10 lysine (K)-specific demethylase 2B EMBV3_07056 ATTGGGAGAGTGAAGTCTTAGCCACTGGATCAGCAGGGAAGTCCCAAGACTGAGCTTTCA Gene BVT0102_058806 + 0 NULL GK000023.2:11594185-11712801 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132379 TCONS_00132380 TCONS_00132378 TCONS_00132384 TCONS_00132383 TCONS_00132382 1 XLOC_080766 NonCoding TCONS_00132384 XLOC_080766 NonCoding NonCoding - 23:11680192-11684836 - TSS99062 771 0.199740596627756 3 0.834589704932156 0.00130121539467192 0.00164956211512063 0.00133231129656559 0.000357157147648563 0.00185563587738685 0.000337861216345932 9.85438724770874e-05 0.000194365097858962 0.00189195887998835 0.000437597365625831 1.22076998031566e-09 0 0.000182352764071808 1.39474064086469e-09 4.70061678288833e-44 0 0 0 0.00158794820686853 0.00237414884556997 0.00362147219774507 0 0 0 0.000568923133947865 0.00509743701204483 0.00330781245157973 0 0 0 XR_226378.1 LOC101906420 PREDICTED: Bos taurus uncharacterized LOC101906420 (LOC101906420), 2e-21 107 77.93 0.184176394293126 0 noncoding 1 0 1 0 -0.560219866542094 0.0379696494632541 -0.0723565687293427 0.156976070587635 GAGCCCAGGAGCTCGAGGGAAGGGCAAGGAGGTCTTAATTGTGGCACATGGGATCTTTGAGCTTTGTTGCAATGTGGGGGATCTTCGTTTTCAGCTGTGGGATCTAGTTCCCTCACCAAGGGTCGAACCCAGGCCTCCTGCATTGGGAGAGTGAAGTCTTAGCCACTGGATCAGCAGGGAAGTCCCAAGACTGAGCTTTCAAAGCACCCCAGACGCGCCCATAACCAGCCCAGTCTCCACACATCTTCCTATTGGCTGGTCTCAGGCTGACCTGTGCTTTCTCACCAAGCCCCGCCCTCTCTCCGAAAGACCGCCCCCTCCCCAGGATCAAGGATCCCACCCCAACTCCCCATCCTTCTCCAACCAAAGGGAGCCCTCAGTGAGGAGAGAAGAGACGGGGCTCCCACCCAGCTCCCCGCTACTAACTCACCAGGAGACTCAACCGCAACAAGGCCCTCAGTTCTCAGGCTCCACTTCTCAGCAGTAAAATCCAGTAAACTCCAGAGGTTTGAATGAGGTCACACAGCTAATAAACAGGAAAAAAAAATCAAAACCAAAGTTCTTAACGGGAAGGGGAAAGAGTAAAAAGGAATATTTTTTGAGTGCCAAATTAGGAACTGTGACCATCATTTGCATCTCCGCATTCTCATCATTTGCATCTCCGCATTCTCCGTATCCGGCATAATACCCCGCATACAGTGAGCACTCAATGAATGCCTACTGGATGACGGAGTGGAGGAGGGAACAAATAAACCCAGTCATCCACACCCA TCONS_00132386 TCONS_00132387 TCONS_00132388 s 5' 27966 TCONS_00132386 TCONS_00132387 TCONS_00132388 s 5' 32609 EMBV3_37312 GCCAGTAGTGGACTTTGACCCCTGCCAGCACGGTATGATGTGAAGCTCTCAGTCAATAGA Gene GeneID:504595|DENND2D:NM_001075168:50_cdna Constitutive 0 NULL GeneID:504595 3 GENE DENND2D MGC142366 DENN/MADD domain containing 2D EMBV3_27340 TACCCACAGTACCTGGCAGTCATCAAAGCCCAGATTGCCTGTGCCAAGGACATTCACACT Gene GeneID:614626|MED29:NM_001080316:733_cdna Constitutive 2 NULL GeneID:614626 18 GENE MED29 MGC148741 mediator complex subunit 29 EMBV3_41416 GCAGAGCTGTGACCCTGGACTGCCCCCTCTCATGCTTTATTCTTGCAAACTGACCACATT Gene BVV0102_086552 + 0 NULL GK000012.2:11641055-11705441 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12827 AACCAGGTGAGGGTCTGGTTCCAAAACCGAAGGGTCAAATATCAAAAGCAGCAAAGGCTG Gene GeneID:100335771|LOC100335771:XM_002691214:45_cdna Constitutive 0 NULL GeneID:100335771 11 GENE LOC100335771 NULL notochord homeobox-like EMBV3_25524 GCAACAACCTTTGCTATGGCTGAGCTGCAAAAGGGTGAGAGAGTGTGGTTTGAGCTAACC Gene GeneID:512308|MMRN2:XM_002698938:23_cdna Constitutive 0 NULL GeneID:512308 28 GENE MMRN2 NULL multimerin 2 EMBV3_29326 TCTGGACATCATCTGGATCAACACCCCTGAACGGACTGCGCCCTATGGACTGTCCAGCTA Variant GeneID:513753|EDN3:NM_001101979:1033_cdna 527^624 2 EMBV3_22758 GeneID:513753 13 GENE EDN3 MGC143242 endothelin 3 EMBV3_32768 AAAATCCTAGGGATTCTGCTGTGAGTGAGATGAGCCAGAGCGGTCTTCAGGCAGAGCCCA Gene BVT0101_082468 - 1 EMBV3_26686 GK000024.2:21256993-21268845 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138575 1 XLOC_084685 NonCoding TCONS_00138575 XLOC_084685 NonCoding NonCoding LOC100847780 24:21257080-21269504 = TSS103812 1260 1 TCONS_00138575_2 98 0.203968253968254 3 0.898816710939387 0.00140842444222131 0.0012535470568268 0.00130405644367337 0.000913830468347792 0.000629347543036104 0.000344257122042154 0.000542843217232754 0.000520546624291588 0.000953479643620158 0.000304224886829322 0.000183511143279553 0.000185900061517378 0.000348229901319965 0.000954181873103544 0.000567288439918826 0.00442853037095856 0.0017221507030172 0.00202139341877904 0.000951458160449122 0.000660322451513522 0.000225013028848287 0.0011323225833914 0.000807638947916885 0.000747015096275655 0.000593358459132776 0.000929120166031946 0.000574047315481261 0.000496158910259849 0.000478135441052543 0.000955517214845074 XR_139032.2 LOC100847780 PREDICTED: Bos taurus uncharacterized LOC100847780 (LOC100847780), 0.0 2046 100.00 0.899206349206349 NM_001242875.1 ELP2 Homo sapiens elongator acetyltransferase complex subunit 2 (ELP2), 5e-63 246 85.78 0.172222222222222 0 noncoding 0 0 0 0 0.00618018569142652 0.967827545240943 -0.0337622586590718 0.54009187128667 ATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCACCAGCAGCAGGCAGCCCTCAAGCAAGCTGCGGTGGGAAGGGAGCCCAGGAGACAAGTTCATTGCCTGTGCTACCGCCAGGCCTGCAGTCGCCTTGGGATGCATGACAGGGAGCGGAGCAGACTCCCTGGACCAGCCTCTGCTCGTATAAAAAGCGCCCCCGAGGACCCAGTGGCCCACTGTGAGAGCCAGCCCTCCTGACCGTGCCCCCAGCACCGGATCTGGGAAAGACCCTGGCGGGGAGGGGCATGGAAGTGGTGGTTGTTGTGGCCCAGTCTGGAGGCATTGGGTACAGAGGCTGTAGCACCTGGGGTGGGCTCTGCCTGAAGACCGCTCTGGCTCATCTCACTCACAGCAGAATCCCTAGGATTTTACTCTGGAAGGAAGGAATGCATCGATGGATGGGTGCCCCCGTTTGCTCCTTAGCATCATCACCCAACCCACCTGCCTGTGCCACACCTTCTAGCCACGCTTGGAGCAGGAACCTTGGGCATCTCGGCCTCCGTTTCCCTACCTGTCCTCCTTCGGAAGAGGGCAGTAAATAATAAAATGTCCCAAACAGCAGCGTATGAAAACAGAAGATGAAAATGACACAAAATTAGGCAAATTTGGTCATGAAGAAAGGAGGGGCAGAGGCTCTCAATCAGAAACACACAGATGCAGGTCTGAATCCCTGAAAGCATGGGCGAGGTTCTGAGAGTATGTGCATATATAAACATTTTGAGAAAAGAGTCTGTAGCTTCCATCATATTTCAGAGGATCTGAGACTCATATAAGGACTACTGCCGTAAGGCTTAAAAACGAAACTCGATGCAAGTACGAGGTAAAGAAAGGTTATCCATTTACATGATAAATACTTTGCAGACACTGATGGGTGTATGCTTGTGGTCACTAGGTCCACTACAGCGCACATCTGTTGACTCTGTGTATCTTCACAGTGTGATCTTCACCACAGCTTGCAAACTGTAACCATTCAGCACCTTCTCCTTCATTCTGTTCAGTCTTTCCATTACAATTCTTCCAGCATAATTTTTTGATAGCAAGCGTATGACTTTGGCTAAAACAAAGAGAAATCATGAGATGAACATATGCTACGACTATGAAACATTTTACTGGCTGCTCAATTCATATTAATTAAATTAGTATGC EMBV3_21446 ACAATCTCCCCGTGGAAGGGAATATACATGTCAAGAAGCAGATCGAATCCAGGAAGCGCC Gene GeneID:532784|GRPR:XM_002700390:52_cdna Constitutive 0 NULL GeneID:532784 X GENE GRPR NULL gastrin-releasing peptide receptor EMBV3_29120 ACATGTTCCCAGCAAGTAGATGTCTCCAGAGCTGTCTCACCTCCCTGCTTCCTGCCTTAT Gene GeneID:522091|ASXL1:XM_002692288:1653_cdna UTR3_Alt 2 NULL GeneID:522091 13 GENE ASXL1 NULL additional sex combs like 1 (Drosophila) EMBV3_09308 GGTGCCCTCCTCTATGCAGATCCTCATGGACAGCTGGGGCTTATTAGTGTTGAATAGGAT Gene BVT0101_001208 - 1 EMBV3_27217 GK000027.2:18810611-18914042 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00157523 1 XLOC_095978 NonCoding TCONS_00157523 XLOC_095978 NonCoding NonCoding - 27:18908754-18912003 - TSS117848 3249 2 TCONS_00157523_6 87 0.20621729763004 1 0 0.000339200828378316 0.00038350373486221 0.000296220038421462 0.000158466807936095 0.000156518906331072 0.000125510379077185 8.6156386812866e-05 6.58403956895228e-05 0.000169993632565186 0 7.04582384226363e-07 0 7.2416554233242e-05 7.2391445883194e-06 0.000157046893365932 2.03228574182453e-06 0 0 0.000355346398854324 0.000252331612001461 7.28799178784673e-05 7.08036317287553e-05 0 0 0.000449956087643446 0.000388162389165156 0.000228125682084888 0 0 0 NM_001075358.1 RFC5 Bos taurus replication factor C (activator 1) 5, 36.5kDa (RFC5), 7e-117 426 94.20 0.0846414281317328 0 noncoding 0 0 0 0 -0.00328476675994838 0.974249485674054 -0.0108708278861976 0.820525198114722 ACCGTCTCGCATGAATCTTGTTCACCATTTTTCTTTACAAAAATATTCTCTCTGCCAAAGAAGAGATAGAAAAATTTCCTTGCAGGGCCAGCATTCAAAATTACTCATTATCTCCACAAGAAACCTTCATGTAACCCAAGAACAACTCTTTATCTGTTTATTAAAAATCTCAAATTGTCCTGGTCACAAGATCTGTGTTTATATGCATGTTGTTAGTATTTAGCATCTGCACCTAAATTTTAAAAAGAGGGGGGTTAAGATAAGGTTTTATTAATTATGTATGACCCAAACACCAAAGACGCATCTCAGATTTTTACTAAAAGATCAGTTAAATAATTTTTATAGAACATTGGCTTTGAAGCACCATAGAACCTTCCTCAAAGCTGGATTATATTTCATAGAAAAATCTTTCAGTGTTGTTGTTTTTTTTTAACTTGATTGTAAAAATATTCTTGCCAAAATCCTGACAGCTCAAGAGGGTGTGCCCTCCTCTTTTCTTTTTCCAGCTATTGATGCACATTCATGATATTGTTTTTATTGTTTCCTCATGGAAAATAAGCCCAATTTTATGCTTGAAAAATGATTACTTTTCAGGAAGATTACATTTGACTTGAAATTTTAGGAAGTACATATTTAAAAGTCCTTTTAACTCTTCAGTAGTTTAAAAAAAATAAACTAAAATTTTCTCCACAAAAAAATTTGCTTTGACTCTTGACACTATGACATGCTTATTGATTATTATTTGTTTTTATTTGAAATGACCTTTTAAAGGACACATTCTTTGCAATTGTTAAAATATGTAATATAAATAGTTGTAAACTATAAAAAACCAAAATTATAATCTCCCACAAATCCACCACCCAGATGTAATTGTTATGCCTATACTTTTTCTTCTTACTTTCACACATACTCACAGACTCATTTTTTTTTGAACTTTTTTTTCTTGCTATTAAAAACAAAAAAGATTTTAAAATCTGGTACATAAAATTCCTGATTCAAGTACTTCAGGATGTCAGGAAGGTCTCCTTCACATGGTCATTTAGGATCTCAGATTCTTTGTTCTAAACTTTTTATTTTATATTGGAGGATAGCCAATTAACAAGGTTGTAATGGTTTCAGGTGGACTGCAAAGGGACTCGGCCATACATATACATGTGTCCATTCTCCCCAAACCCCTCTCCCATCCAGGCTGCCACATAACACTGAGCGGAGTTCCCTGTGCTGCACAGTAGGTCCTTGTGGGTTATCCGTTCATACACACTCATTTTGAAAAACAACTCAGATCACACTGTATATACAGTTTAGTATCTGGCTTTTTGGCTTAAAATTTTGTTATAAGCATCTTTCTATGTCATTAAATATCCTTTGGGAAAAAGCTTTCAAGCTCATATAGTATTCCATATAGAGCCACACCACATTTTATTTAAAAATTCTATTTATTTTTGATCTCTAATGTTTCTAATGTTCTGTTTCACTAATCAAAACGTGTCAGGGAAGTCTTGAGTGAACTGGAACTGGGGCTCAGAAGCTTCCAGATTGTTGGCAGGCAGAAAGAATCCTGGCTCCATAGGGCTTTGTTGGAATTACTACAAATACTTTCATAGAAGCTGATGAACCTACTGAATTTACAAAAATTTGAACTGTGCACAGATACTTGCAAAAGTCTGATGATTAGGGAGCCTGTGATGATTATCAATCTGCCCCACACATGTATCTAATTCCATCTAAAGAGAGGGAAACTTATTATAGATGAAAATGGGATCAAAATGTAAAGTATATCTCAGCATCAGGGCTTGATGTCAGGGGAGCATGGTGGTTCTGGGCCCAACATTCTGTTTTAAAACCTTGCCTGTTCACAGAGTTAGCACTCCTTCTATGCTGGCCCGGAGGTTCCCCTTTGGCTCCTAGAAAAAGGGCAGAGCTGCCTGCAATCCACAGTGCGCTTGTTCTCTATATCTGGTGTAGAGCAAGGCCAAAGAAGACATTGGTATTTGGCATCAACGACTTTATAAGAATCCTGGAAGTGAGGATGCTGTTTCTTTGCAGAAACCCAAATGTAGCTCTCACTTGATCCTGGGTATCTAGTCTGCTTCGAGCTAAGACTTGGCTTCTATAGAGACGGGTGCCCTCCTCTATGCAGATCCTCATGGACAGCTGGGGCTTATTAGTGTTGAATAGGATTTTCCTGAGTTTATAATCATTAGCAATACTACCCTCCTGAGGAAAGAGCTCTTGGCTTCACTCCAAATCAGAAGTTTTAGCTGCCTCAGGAGAAATATAAGAATTCCGGAAAACGTCTTTCAAGTGTTTGATATGTCTCCAAATCTCCTCGGGTCGCTGAAGATCACAGCATTTTCGGAAAGTTCCCAGTGAATATCAAGTTTGGATTTAAAAATTCCAATAGCAGTATTATCTGCAGCTAGAATATCTGTGTGATTTTGCATATAAGAAAAGTTTGCAAAAACTTCTAAAGAAGAGGTTCTCCAGGAGAAGTTTGGTAATACACAACACCGTTGAAGTCTTAGAGAGATTCTATTCTGTGAAGACAGAGGGGCAACGTTTATCCAAATGGCCTGTGCTTCATCACAAACACACCAGTACCATATTTGAGGAATTAAGAATATGATCCTGAGTTCACTTATTATTTTCTGTATAATTAATATGACAAATATAGGAAGTGGATCAGTCTCCCTGAGGCTACTTTTGGCATTTCCACAGGCTCTGTTGCCATCTTATCGGTCTACTTTTCACCTCCTTGATGTTATCCTTATCATTGCTGTGGAACTTCCTATCTTCCTCCTCTGGGTCTCCCTTCAATTTCCCAGCCTCTGCCATGGTACCTTGTGCATGACCATCAGTCAGTTCATATCAGTGCTTCTTAACTAAATGAATGGCTGGTTTCACTTTCTGCCCTAGCTCAGGTCAACATAGTCAGCCATTTCAATGATGTAGTCTCTTCTCTCAGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCGATGGGGTCGCTAAGAGTTGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAATCCACTCCAGTGTTCTTGCCTGGAGAATTCCAGGGACCAGGGAGCCTTGTGGGCCGCCGTTTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAGTCTCTTCTCTCA TCONS_00155157 . 5' 2027 TCONS_00155157 . 5' 2027 EMBV3_29371 CAAGCAACAGCATGTTCCTCAAAGGCAAATCAAGAATACATATTGAAACTGATGCACAGG Gene GeneID:539570|SIK2:XM_002692988:147_cdna Constitutive 2 NULL GeneID:539570 15 GENE SIK2 SNF1LK2 salt-inducible kinase 2 EMBV3_13336 ACTCAAGTCTGGAGATCTTTGGGAGAGCTGTGATGTAAAAACATGTGTTGTGCAATAAGG Gene GeneID:616934|HSD17B3:NM_001076439:14_cdna Constitutive 0 NULL GeneID:616934 8 GENE HSD17B3 NULL hydroxysteroid (17-beta) dehydrogenase 3 EMBV3_15330 GCTGGCGCTGTGGCCGGAGGATTGATATTTATTTTTGCATTGCGATGGCTGACGGCGTTT Gene GeneID:100270684|LOC100270684:NM_001145035:2_cdna Constitutive 0 NULL GeneID:100270684 15 GENE LOC100270684 NULL hypothetical protein LOC100270684 EMBV3_04827 GCAGAATGGCGTTTTACGGATGCTGGAAAGAAATTCGCAAATCAAGCCCAGGCCAGAGAG Gene GeneID:617499|LOC617499:XM_002699594:97_cdna Constitutive 0 NULL GeneID:617499 X GENE LOC617499 NULL similar to Ssu72 RNA polymerase II CTD phosphatase homolog EMBV3_16140 GTCTTGGGTGGCCCTACACAGCATGGCTCACAGTTTTATTGAGTTAGACAAGGCTGCAGT Gene BVV0102_302374 + 0 NULL GK000011.2:27756043-27934970 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00190 GCAGGATTTGACCAGGGGGAAATTTTACTGGCTGGGACTTCTCAATACCACCATGACCTT Gene GeneID:100296201|LOC100296201:XM_002694737:111_cdna Constitutive 0 NULL GeneID:100296201 18 GENE LOC100296201 NULL hypothetical protein LOC100296201 EMBV3_19496 CAACTGTTCAGTGGCTTAACTTCCTCATCTGTCTGGAGGTATCCTCAGTAGCTGCCCACT Gene GeneID:100298888|LOC100298888:XM_002697984:52_cdna Constitutive 0 NULL GeneID:100298888 25 GENE LOC100298888 NULL similar to acyl-CoA synthetase medium-chain family member 2A EMBV3_04294 CGATCCCTCTCGGGTCTTATGGCCCCGTGTCCTCTCCCCAAAGGTTAATCCCCGAACTCA Gene GeneID:100336835|LOC100336835:XM_002690330:8_cdna Constitutive 0 NULL GeneID:100336835 9 GENE LOC100336835 NULL retinoic acid early transcript 1E-like EMBV3_07626 AGACACTGTTCAAGTCATCAGTCACATTCGATGAAATCGTGGATACTTTGGGTGAAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00810 CAGGGCTTCAATCCTAGGTATTTTAGGAGGTAGTTACTTAACCTGCCCAAGTGAGGTTCA Gene GeneID:613828|DR1:NM_001046519:192_cdna UTR3_Alt 2 NULL GeneID:613828 3 GENE DR1 MGC128978 down-regulator of transcription 1, TBP-binding (negative cofactor 2) EMBV3_22890 ATGCAGGCACTTTTTCACCTTATGAGCACGTTGTCCCTCACATTACTGATGCTGTCCAGG Variant GeneID:767849|CTPS2:NM_001076966:41_cdna 424^594 1 EMBV3_36666 GeneID:767849 X GENE CTPS2 MGC137978 CTP synthase II EMBV3_06548 CCTGGTAAAGCTGACGTGTTTATGAAGGAACATCAAGTAAATGTGCTGCAGTCCACCCCC Gene BVT0102_169217 + 0 NULL GK000011.2:44658624-44669019 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027745 TCONS_00027743 TCONS_00027746 1 XLOC_015318 Coding TCONS_00027746 XLOC_015318 Coding Coding GCC2 11:44667384-44702458 = TSS19599 6814 1 TCONS_00027746_2 1684 23 0.806375274427622 0.0084261569348052 0.00446818858568256 0.00464209436261212 0.00284353343689467 0.00371290382774158 0.00181228128305649 0.00259376363127303 0.00207549469834932 0.00373095678454604 0.00109474250666591 0.000505804983917626 0.000377981720442996 0.000102561044761637 0.00083463778132667 0.000926911290974027 0.00918618478330291 0.0016594178610892 0.00464395709287565 0.00222903681029853 0.00195182738877998 0.00143517628557425 0.00171895051412486 0.00152042255172645 0.00256983307908411 0.00386973802661738 0.00330100891987078 0.00162724770539636 0.00118135563536933 0.00101680468454667 0.00169903208014455 XM_005212653.1 GCC2 PREDICTED: Bos taurus GRIP and coiled-coil domain containing 2 (GCC2), transcript variant X1, mRNA. 0.0 1.196e+04 100.00 0.972703257998239 NM_181453.3 GCC2 Homo sapiens GRIP and coiled-coil domain containing 2 (GCC2), 0.0 4942 80.21 0.798503081890226 TCONS_00027746_2 sp|Q8IWJ2|GCC2_HUMAN GCC2_HUMAN GRIP and coiled-coil domain-containing protein 2; 0.0 2491 78.38 0.999406175771972 1 coding 0 0 0 0 -0.024815059584157 0.866459344006614 -0.0170817814859621 0.805079148963057 ACGCGAGCGCCGCGGGGCCGTGGCCTTGGAGACGCGGGGGCGGGGCCGGCGGAGAAGCGCGACCTTTAACCCGAAGCGGCGGTCCGTGGGAGGCGCGGGGTGGAAGTGCGGGCTGCGGGCGGCCATGGAGGAGCCTGTTCACGAGGGGGTGGCCTCGCCGGCCGCTCGCGGGACCGGGAAGTCCAAGCTGGAAGCCTTGCCCAAGGAAGATCTTATCAAGTTTGCCAAGAAGCAGATGATGCTAATACAGAAAACAAAATTGAGATGTACAGAGTTGGAGAAAGAAGTTGAAGAATTGAAGTCAAAGCTGGTTGCTGGAGGAGCTGACATCATTAAGGCCTTGACTGAACGTCTGGATGCTGTTCTTTTGGAAAAAGCAGAGACTGAGCAACACTGTGTTTCTCTGAAGAAGGAAAATATTAAAATGAAGCAAGAGGTTGAGGATTCTGTAACTAAGTTGGAAGATGTGCAGAAAGAGTTGGAACAATCACAAAGAAGCTATGGAAAAGAAATAGAAAATTTGAGAAATGAATTAACAACAGTACATTCCAAATACAGTAACGATAAAGCTGATTGGCAAAAGGAAGTGGAAGAAGCAGCAAAAAAACAATTAGAGCTTTCAGAACAGCTCAGATTTCAGAGTGATTCTGAAGATAGTGTTAAAAAGCTGCAAGAAGAGATTCAGAAAATTAAGCTAGCCTTTGAGGATCAAATTTTATGTCTGCAAAAGCAGTTAGAAACTGCCACAAATGAAAAGGAGCAAGAAATTACTCACCTCCAAGGAGTGATTGAGGCTAATTGTCAGCAGTACCAAAAAGATATTAATAGTTTGCAAGAAGAACTTGTACGGTTGAAATCTACACACCAAGAAGAGGTGAAAGAATTGATGTGCCAAATTGAAACATCTGCCAAAGAACACGAAGCAGAAGTGAATTATTTGATCCAGCTAAAAGATAACTTAGTCAGAAAGTGTGAGGCAGGTGAGATGAACATTCAGAAGTATAAATGTGAATTAGAAAATGAAGGGAAAGCCTCAGGTGCAGGCCAAGAAAATCAGGTGTGCTCTTTGCTCTTACAGGAAGATTCTCTTGTAGAACAAGCAGTGAATGAAAAAGTTAGACACTTAGAAGATGCCCTAAAAGAACTAGAGTCTCAACATAGCATCTTAAAAGATGAGTTAACTTACATGAATAATCTAAAATTAAAACTTGAAATTGACGCCCAACATATAAAGGATGAGTTTTTTCATGAACGGGAAGATTTAGAGTTTAAAATTAATGAATTATTACTAGCTAAAGAAGAACAGGGGTATATAATTGAGAAATTAAAATCTGAGCTAGAAGATGCAAATAAACAGTTTTGCTGCACCATAGAACAACATAACAAGGAAGTACAGAGTCTGAAGAAACAGCATCAAAAAGAAATAACAGAACTAAATGAGACATTTTTGTCAGATTCAGAAAAAGAAAAGTTAACATTGATGTTTGAAATACAGGGTCTTAAGGAACAGTGTGAAAAACTACAACAAGAAAAGCAAGAAGCAATGTTAAATTATGAGGGTTTACGAGAGATTATGGAAATTTTACAGACAGAGCTGGGGGAATCTGCTGAAAAAATAAGTCAAGAGTTTGAATCAATGAAGCAGCAACAAGCATTTAATATTAATGAACTTCAGCAGAAGCTCCAAACTGCATTTAATGAAAAAGATGCTCTTCTTGAAACTGTGAATTATCTCCAGAAAGAAAATGATAACTTACTGTCCCAGCAGGAATGTGTACCAGAACTTGAAAATACCATAAAGAATCTTCAAGAGAAGAATGAACTGTATCTAGTTAGTCTCAGTCAGAGAGATACCATGTTACAAGAATTTGAAGCAAAGATAAGTTCTCTTACTGAGGAAAAATATGATTTCATAAGTAAGATGAGAAGTTCTCATGAAGAGATGGATAATCTTCACAAAAAATGTGAAAGGGAAGAAAGGTTGACTGTAGAACTCAGGGAAAAAGTGGATCAGACTGCCCAGTACAACAGTGAACTAGAGCAGAAGGTGAATGAATTAACAGCAGGACTAGAAGAAACTTTAAAAGAAAAGGATGAAAAGAACCGAAAACTGGAAAAGCTTACAGCTCAGTTGAAAATTCTCTCCAAAGATCAGGAAGCCACGTCATTGGAAGTGAGGTCTCTTCGTGAAGAAAATAGCAGACTGAGTTCAGAGAAGAACCTGCTGAGCAGGGATCTGGAAGCCCTCCTGTCTCAAAAAGAAGGAGATGTTACATTTCAGGAGCAGATCAATAAATTAGAAGAGGAACTTCGGTTAGCTGTCAGAGAAAGGGATAATTTGAATAAACTGTTGGAAAACGAGCAAGTTCAGAAGTTGTTTGTCAAAGCTCAGTTGTGTGGTTTTCTTGAACAGATGGAGTCAAAGGTTTCACAAGAAAGGGAAGAACAGGATGTTGTAAACATCCTACAAGCCATGGGTAAATCCTTAGATAAAATAAATGAAGAAAAACACAACTTGGCTTTTCAGTATGATAAAAGAATAGTAGAGTTAGAAGAAGAGATTAAGCTCCTTCAAGAAGAGCACATGGTTCAGTGTGAGGAACTTAGGTCTCTACTAACAGATTATGAGCAAAAGAAAATTGTCCTAAGGAAAGAGTTAGAAGAAGCCCTCTTAGAAAAGGAGGCCCTGCAGTCTGACCTTCTGGAGATGAAGAATGCCAGTGAACAAACAAGGTTTGAAAATCAGAATCTCCTAATTCAAGTTGAAGAAATGTCTCAAAAATTGTGTAGAGAAAATGAAAACCATCACAAAAAAGAAAAAGATCTTATAAAAGAACTTGAAAACCTAAGGCCATTATTGGAACAAAAAGAATCTGAATTGCAAGATGTGAAAGCAGAGTTAATATCATTAAAGGATTCCTTCAAGAAATCAACTTCTGTAGAAAGTGATCAACCTTCAGTAAAAGAGTTTGAAGAAAAAATAGGATACTTGGAAAAAGAAGCCAAAGAGAAAGAGGAGAAAATAAATAAGTTAAAACTAGTTGCTGTGAAAGCAAAGAAAGAACTAGATTCTAGCAGGAAAGAAGCCCAGACGCTCCAGGAAGAACTTCAATCCGTTCGCTCAGAAAGGGATCAGTTGTCTACTTCCATGAGAGATCTCATTCAAGGAGCTGAAAACTATAAGAATCTTTTATCAGAATATGATAAGCAGTCAGAACAGTTGGATGCAGAGAAAGAACGTGCCAATAACTTTGAGCATCAAGTAGAAGACCTTACAAGACAATTAAGGAATTTGACTTTTCAGTGTGAAAAATTAACCTCAGATAATGAAGACTTCCTGGCCCGTATCGAGACGCTGCAGTCTAACGCCTGCTTATTGGAAGCGCAGATTCTAGAAGTCCACAAAGCCAAGGCTATGGCAGACAAAGAGCTGGAAGCTGAAAAACTTCAGAAAGAACAGAAAATAAAGGAGCATGCCAGTTCTGTAAATGAACTAGAAGAACTTCAGCTACAGCTTCAAAAGGAAAAGAAACAGCTTCAGAAAACCATGCAAGAATTAGAGCTGGTTAGAAAGGATGCCCAGCAGACCACTCTAATGAACATGGAAATTGCTGATTATGAGCGCTTGATGAGAGAGCTGAATCAGAAGTTATCTAATAAAAACAGCAAGATAGAAGATTTGGAGCAGGAAATAAAAATCCAAAAACAGAAACAAGAGACCCTGCAAGAAGAAATGACTTCGCTGCAGGCTGTGCTACAGCAGTATGAGGAAAAGAATACCAAGATCAAACAGCTGCTTGTGAAAACCAAGAAAGAACTGGCAGATTTGAGGCAAGCGGAGACTGATCACTTAATGCTTCAGGCATCTTTAAAGGGTGAACTGGAGGCCAGCCAGCAGCAAGTAGAAGTCTATAAAATTCAGCTGGCGGAAGTGACGGCAGAGAAGCACAAAGCTCATGAGCACCTGAAGGCATCGGCGGACCAGCACCAGCGCACGCTGGGTGCCTACCAGCAGCGGGTATCAGCCCTGCAGGAGGAGTGCCGCGAGGCCAGGGCAGAACAAGCTGCGGTCACCTCTGAATTTGAGAGCTACAAAGTCCGGGTCCACAACGTTTTAAAACAGCAGAAAAATAAGTCTGTGTCTCAGACTGAGGCTGAGGGGGCCAAACAAGAAAGAGAACATCTAGAAATGCTGATTGATCAACTGAAGCTCAAGTTACAAGACACCCAGAACAGCTTACAGATCAGCACCTCTGAGCTGCAGGCCCTGCAGTGTGAACACTGTGCCCTGCTGGAGAGGCACAACAGGGTGCTGCAGGAGGCCGTGGGCAAGGAGGCTGAGCTCCGCGAGAAGCTGTGCTCCGTGCAGTCGGAGAACTCCGCCTTGAAGGCTGAGCACGCGCAGATTGTTGATCAGCTCACGGCTCAGCACGAGGCCCTACGCGCTGGCTTCCGGGAACAAGTGCGCCAGCTACAAGAGGAGCACCGGAGGACGGTGGAGACGCTGCAGCAGCAGCTGTGCCGGCTAGAGGCCCAGCTTCTGGAGCCCCGCAGCGAGCCAGCCACGCGGAGCCCAGCTTCTTCCCAGCAACCTTTGAGGAGCCTTCGAGAGAGGAGAAGCGCAGACCTCCCATTCCTAGATGTGCAGGTCACGGCCCGGGAGGAGGGGGAGGGGATGGAGACCACGGACTTGGAGCACGGCTCTCCCGCCAGCACCCCTGCACAGTCCCTGGAGCAGCTGCTCAGTTCTCCTGAAGCCAGGCTCGAGCCACCTGCATGGCACAATGAATTCACCAAAGAAGAGTTGGTTCAGAAGCTCAATTCCACCACCAAGAGTGCCGACCACTTAAATGGCCTGCTTCGGGAAACGGAAGCCACCAACGCCATCCTCATGGAACAGATTAAGCTTCTGAAGAGTGAAGTCAGGCGGCTGGAGCGGAACCAGGAGCGGGAGAAGTCGGCAGCCAACCTGGAGTACCTGAAGAACGTGCTGCTGCAGTTCATCCTGCTGAAGCCGGGCAGCGAGCGGGCGCGGCTGTTGCCTGTGGTGGACACCATGCTGCAGCTCAGCCCTGAGGAGAAGACCCGGCTGGCAGCCGCCGCCCAAGGTGAGGAGGAGAGCGGGTCCCGCTCCTCGGGCTGGGCATCCTACCTGCACAGCTGGTCTGGACTCCGGTAGACTGATGGGAGAGCGCTGTTTATGAACCAAATAGTCTGTTTGGCAAAAAAGGCTTGTATATGTCACTGTCATTGTTTGGTCCGAAACCATGTGTATGTAATTCATATCTCCGTGTGTGTATCCGTGCATGTGTCAGATGAATTGAAGAGGCTCGGCCCATGGTGAACGTCCAGCAGTTGGAGTGTGGACATGGCCGTGGCCCCGAGACTCTGTGCCTCTCCATTGCCTCCAGACCCAGGAGCATCACCCTGCCCTCCTCTGGACTCTCAGGCTGCCTGAGTCAGGGCTGTCCTGTGAATTCTGAAGTTAAACTAAATTTTGGTACCATACCAGCCAGAATTTAGACTTTTAAAAGAATGTTGTAAGACCATTTATCACAAGATCAGACTGGAAGGTCGATTGTTATCATTGACAAATTATTACAGAAAACTTGTGAGTTAGAATGTGAAGGAAGACGCTTTCCTGGTAAAGCTGACGTGTTTATGAAGGAACATCAAGTAAATGTGCTGCAGTCCACCCCCAAGTCTAAGTTAACGTGTGACTGTTTCCTTATTCCCTTTAAAACTCCTGGGTCTGGGGGCGATGGAGAGGGCCCCACTCCACCTGCTGCACCTTCACCATGGGCTGAGCCTCTTCAGTTCATCTGACACACGCAGTGTGTGGACACACACACAGTTTTGGACCAAACAATGAGCTGCTCTGTTTTCTCCAAAGTACGTTATCTCAGACTGGTTCTGTGGTCACAAGCCCTGGTCACTGTGCTCCCAGATGGGGCGCTCCTGGGGAGTCTGCCCATATTCCTTTTGTGCTTCAGCAGCCTCTATACCGGCGTCTGTCTGGGGAATTTGCTCAGTTTGTCCAGAGAAACTTTCCAGTGCCCTGGCTGTGTCACTCGGTGTCCTGTCCAGAGGCAAGCTGGTGCTCACGAGTCCCAGCACACCGGTCACTCACATGCTGCGAGGGGCCCCGGGCTATAGCTCCTGGTGGTGGTGGTGGTACTTGGCTTGATGCCTCTGAATATTCTGTGGACTGTGTCAAAAACATGTCCTTAAATCATCAATGTGAACACTCTATTTTTAATATCTATTTGTTAAAAATCACCTCAGTATCCTCTATGAAGTTGTTTCGGCTTCTAGTCCACCCTGTCATCTTCGGTCTCAGCTGGTGAACTGACTTTGTATTGCGGTTACGGGAACATTGGTTTCCAGTTTACTTTAACTGAAATTTGCTGCTGACATGTTGAGTTTGTTCTTTAACAAATAATCTCAATATCTGACTTTCCTCTTATTTCAGAAGAACAGACCTAACTAGTGAATGTATTAATGAAAATGCTTCTATTTCAGAGCTGACTTCTAAGAATTTAGTTTTTTTACTTGATAAACTGTGAATATGAGTATGCCAGAAGCATACCAGGTAACTATTATAATATTTAAATAAATCTCACTTTCTCTCTGAGTCCAGGCTATCAACCTGTTTTGAAATACGGGCTCTACCTATGGACATAATAACAAAAATGTCTTGTATGATCAGAAATTACTACTTCAATTACAGAAGGGATCCCCCTTCCTGGTTTCCGCAACGAGAGGAAATGTAATGATTATTTTAATATTTCTATTAAATGTGTTAGACTGTATG EMBV3_11920 GACGCCCAGGCCTCTTTGGCCCTCACACGTGGACTGCATCCTTCATTTTCATCTATATAA Gene BVV0102_131677 - 0 NULL GK000028.2:32382171-32824639 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159593 1 XLOC_097445 Coding TCONS_00159593 XLOC_097445 Coding Coding C28H10orf11 28:32004680-32685925 j TSS119541 2135 1 TCONS_00159593_2 171 0.433255269320843 7 0.996876302763767 0.000182956365004093 0.000430771200087354 0.000230512008270121 0.000119973081580795 1.16880827877686e-05 2.15945159145988e-58 0.000101637062064049 2.47376862182547e-05 0.000187949033338237 0 0 1.36891966628443e-266 4.84169507130271e-06 1.10163676757592e-05 2.60938295671874e-06 0 0 0 0.00020136665219031 0.000600125358111741 0.000392364676016898 0 0 3.77659903791241e-74 0.000169303724744321 1.69973789321505e-05 1.04593294239974e-05 0 0 0 XM_002698921.2 C28H10orf11 PREDICTED: Bos taurus chromosome 28 open reading frame, human C10orf11 (C28H10orf11), mRNA. 0.0 937 100.00 0.242622950819672 XM_005270212.1 C10orf11 PREDICTED: Homo sapiens chromosome 10 open reading frame 11 (C10orf11), transcript variant X1, mRNA. 1e-155 554 88.60 0.200936768149883 TCONS_00159593_2 sp|Q9H2I8|CJ011_HUMAN CJ011_HUMAN Leucine-rich repeat-containing protein C10orf11; 1e-91 270 85.99 0.912280701754386 1 coding 0 0 0 0 0.0837699737268269 0.72366052116962 -0.00640066662573467 0.904235641034007 ATGACGGGAAATCTCGGGTGTCTCGAGCGCGCCCCAGTGCGGGTTCTCACGAGCCTTTTGTCTTTCCGGACCAAGATCCTTAACCTTTGTCACATCACCGACTTGGAGTATCTGCTTGACCACCTGGCAGAAGTGACACCAGCTCTGGAGTACCTCAGCCTCCTAGGGAATGTGGCATGTCCCAACGAGCTCGTCAGCCTGGAAAAGGATGAGGAAGACTACAAGAGATATAGATGCTTTGTTCTGCACAAGCTGCCCAATTTGAAGTTTCTGGATGCTCAGAAAGTAACCACACAAGAACGAGAGGAAGCTTTGGTCAGAGGGGCCTTCATGAAGGTGGTGAAGCCCAAGGCCTCCAGTGACAGCGTTGCTGTCTCTCCTAAGAGCCGCTACACACCCCTGCCTTCTGCTTCCAGGGAACTCACCAGTCACCGAGGTGTCCTGGGGAAGTGCCGCTATGTTTACTACGGGAAAAACTCAGAGGGCAACAGGTTCATCCGTGACGACCAGCTCTGAAAGCAACAGAAACATGAGGTCGGTCCAGCCTGGGGCAGTTTCTCTCCAAGAGAAGATGGAGGAAGCACAGCTAAGTGACTGGAAATTTGACATGCCTTCATGTCAAGAGATACCTGTACCTCTTGGAAACAACAAGCCCTTTGTGGTACCTCAGTGGGATCATCAGTGGGGCATGGCCCTCTCTTGGACAACGGTGGAACTCTGGCATTATATAGACGAAAATGAAGGATGCAGTCCACGTGTGAGGGCCAAAGAGGCCTGGGCGTCTCCATTTTCTTGAGACTTCCAATATATGGGGGAGGGGGAGAGGAATGCAACTGAAACAGCTTTATAAAAATTATATGTGTTATATTTATATGTTGTATTTTTAAATGTTTATGCTGAGTAAATGAATTCTTTACCTTTAAGAATGTAATATTATTTGCTACATTAAGATTATCACAGAATTGATAAAATGGGGGTTATACACAATATTCTCGCACAATGGAACACAAATTTCGGGTTGTGTGATGCACTTTATCTTTTCCCCATTTCTGTCATGCATCTTAGAAATTGTGTGAATGACGTCATTTAGAGATAGTCTCTTTTTAAAATAATTTATTTTGATTGTAGTTGATTTACAGTGTTTCAGGAGAACAGTGTGACTCAGTCATACATACATATGTATATCTATTATATTTCAGTTTCCAGCATAGGTTATTACAAGATACCAACTATAGTCTCCTGTGCCATACAGTAAGTCCTTGTTTGTTTATTTTATATAGTAATGTGTATCTATTAATCCCAAATTCCTAATTTATCTCTTTGTCCCTTTCCCCTTTAGTAACCATTAGTTTAGTTTCTAAGTCGGTGAGTCTGTTTCTGCTTTGTAAATAAGTTCATTTGTATCTTTTTTTGAGATTACACATATAAGTGATATGATACATCTTTGTCTGACTTACTCCACTTTGTATGAATATAAAGTCTTAACATGAGACGCTTTGTGAGTTTGTGTGTCAAATAACCCTTTCTGCCTTTCCATTTCCACCCTATTCCTCTATAGACCATAGCTTTCCAAAAAATGTCATTCTTGGGCAAGTTACTTACTTTTCTGGCTCTTGTTCTCATTCCTAAAATGCATGTGTGTCTGAGGCAGGGGTAAAGGTATGGGGGTCCCCAGCACCACCACAATCCAAGATGAGACCCCAGATTTCCCCAGGGTGAGAAGCATTTTCCCAGCTTTTAGAGAGAAGGTCACTTCAGTCCCCAGGGAAACCCCACTTGGGATGATTTCTCTGTGGTCCTCTCTCAGTCCAAGGCCCCTCCTTTGCAGTCCATGCTATCCATGGGGAACCAGCCACTACGAATGCCCCAACCCTTCTGAGAAGGGGGTGGCTGAGGAAGGAGCCGTGAACAGTGTCATTTTATTGATTTTATTGACGTTTAGTTGACTTACAGTGTTATTTTCACGTGTACAGCACAGTGATTCAGATAGGTGGGTGGATAGACAGTTCTTTACCCAATTCTTTCCCCTACAGATCATTACCAGATCGTGAGTGTAGGTCCTTGTGCTATACAGTAAGTCCTTATTGATTATCTATTTTATATAGTATGTATATTTTAATCCCAGAGTCCTAATG EMBV3_01372 GGAGCCTGGGCAGGCCAGAGGTCCCATGTAAATGTGTACATTGCAATATTTATGTTTGTG Gene GeneID:616302|AGAP3:XM_002687049:156_cdna Constitutive 0 NULL GeneID:616302 4 GENE AGAP3 CENTG3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 EMBV3_26083 TGGATGGGAAGCTCTATGTCTGCGGGGGCTTCCACGGAGCAGATCGCCACGAGGTTATCT Gene GeneID:516527|KBTBD12:XM_002697152:91_cdna Constitutive 0 NULL GeneID:516527 22 GENE KBTBD12 KLHDC6 kelch repeat and BTB (POZ) domain containing 12 EMBV3_35241 GGTGGGGACAGGAGTCAGCTTTCTTTCAGAACTCAGTGTAACTGTATCCGGTGACATTTC Gene GeneID:537480|PTPRS:XM_002688918:83_cdna Constitutive 0 NULL GeneID:537480 7 GENE PTPRS NULL protein tyrosine phosphatase, receptor type, S EMBV3_05844 CAACTCTTACACTCTCACAGGGAGAATGAATTGTGTGCTGGCCACATACGGAAGTATTGC Gene GeneID:100297121|LOC100297121:XM_002693874:147_cdna Constitutive 0 NULL GeneID:100297121 16 GENE LOC100297121 NULL similar to upregulated during skeletal muscle growth 5 EMBV3_18708 GACGATCCCGGAGAATGTGTCCAAAACTACCTCCTGCTCTACGATGGACCCGATGCTAAT Gene GeneID:523202|CUBN:XM_002692103:319_cdna Constitutive 1 NULL GeneID:523202 13 GENE CUBN NULL cubilin (intrinsic factor-cobalamin receptor) EMBV3_14636 TAATTCCAGCCACCACCTCCTGCCCTACTGGCTCCTGAGCGCCTTTCCTTCCTGTGAAAC Gene BVT0102_220066 - 1 EMBV3_06156 GK000015.2:30033584-30056478 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18164 TGCTCCCCTTTAAAATTCCTGAGTCAGTGTGGTGGCAGCTTAGTTTTACTATGCTTCAAG Gene GeneID:537566|KIF18A:XM_002693489:126_cdna Constitutive 0 NULL GeneID:537566 15 GENE KIF18A NULL kinesin family member 18A EMBV3_37678 TTGGAGGTACTGACCGATGCTGCCGCCAGGACCTGGAGGCCAGGGAGCGGCAGGCCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37342 TCACCATCCTGTGTGACAAGTTCTCTGGACACCCCAAGGGCTATGCCTACATAGAGTTTG Gene GeneID:617429|LOC617429:XM_002694860:815_cdna Constitutive 0 NULL GeneID:617429 18 GENE LOC617429 NULL similar to poly(A)binding protein nuclear-like 1 EMBV3_13134 GAGTATGAGGTGTCAGCTGTGCCCACCGTACTGGCCCCTCCCGCCTCCTTCCTCTGTCTG Variant GeneID:281557|TXN2:NM_174208:161_cdna 475^653 5 EMBV3_05963 GeneID:281557 5 GENE TXN2 MGC137598 thioredoxin 2 EMBV3_36221 AGTGTTCTGGTTCATGGAGCTAGTGGAGGAAAATCTGTTGGTGAAAAAGGAGTTGATGTG Variant GeneID:281093|CRYZ:NM_174025:2_cdna 841^990 3 EMBV3_42682 GeneID:281093 3 GENE CRYZ NULL crystallin, zeta (quinone reductase) EMBV3_28278 CATGAGAAAGCCCGCCCACCAACTGAGAGGCGCTTACAGGGAAGCTCAAAGTAGGGCATT Gene BVV0102_400328 + 0 NULL GK000011.2:101672199-101680051 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08494 GATTTTCTGATGTCATGATCTAAATGAGGGGTGGGGGTGGGGATGGAAAGGAACCCCAAG Gene GeneID:518488|ITPK1:XM_002696819:598_cdna Constitutive 0 NULL GeneID:518488 21 GENE ITPK1 NULL inositol 1,3,4-triphosphate 5/6 kinase EMBV3_10099 AGCAGACGCTCACTGCCATTCTGACCATCTTGCACTTCAGTCCAGAGGAGAAGCAAGCGA Gene GeneID:539985|GCC1:XM_002686934:46_cdna Constitutive 0 NULL GeneID:539985 4 GENE GCC1 NULL GRIP and coiled-coil domain containing 1 EMBV3_06879 TGGGCTGGCAGCGTCTATGGCAATCAGTCTGAGGATGAAATGGGAACCGTGGGTTATTTT Gene GeneID:613456|OTOR:NM_001037484:8_cdna Constitutive 0 NULL GeneID:613456 13 GENE OTOR MGC133655 otoraplin EMBV3_23255 AAGAGGCCAGTTTGGAGCTGAAGGTGGCAGAGCCCTTCTTCCCCCAGGCCTCTCCCTGGA Variant GeneID:615223|BTN3A2:XM_002697365:360_cdna 632^913 1 EMBV3_11234 GeneID:615223 23 GENE BTN3A2 NULL butyrophilin, subfamily 3, member A2 EMBV3_09534 GGAGTCCAGCCCCTATGAATTCCTTCCTCATTCCCCTCACTTGATGTTCCTAATTTCCTT Gene BVV0102_248130 - 1 EMBV3_43458 GK000002.2:96906895-96941045 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103128 TCONS_00103130 1 XLOC_062019 Coding TCONS_00103128 XLOC_062019 Coding Coding - 2:96899113-96909691 - TSS76642 7108 2 TCONS_00103128_8 204 0.278277996623523 3 0.328259430840503 6.10827789555653e-12 0 0 0 8.68244166655021e-08 0 0 9.24578988022193e-08 0 4.05197825894716e-06 0.000382748126862359 6.85406604573528e-06 0 0 0 0.00056724079293834 4.20427753280464e-05 0.00240389862642311 0 0 5.33857914871893e-08 0.000216771298558585 0.000313738778654219 0.000146126236350649 4.87371464881862e-07 0 6.58391296091907e-12 0.000137834264108265 0.000109195925026964 0.000580646172962576 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 0.0 1214 91.73 0.118880135059088 1 coding GGTTTGTTTATGCAGATGCATCTTGGGCATCCTCTCCATCTTGGGTAATAACAGTTCATCTCCTTTTCCTGTTATAAGAGGAGGATACCTTTCAGGAGAGAAGGGGGACATTGTCACATGAGAAATTTATGCCCCACTTTTAGGCAACAGGGGGAGGGCAGAGAACTCTTTCTGTGTCTGATTTTTCTCAGCAGCCTTCAAGTCAAAGTAATCCGTACGCCAAGGGGTTGGAATGGGATATTCTGATCCCCTAAACCTTGACAGGCACTATGAGAATAGCAGTGATATTCCCTTTGGTGGTACCAGCTGTCATCTTCCCTAGGGGCAGAGTCACCATTTTAGGTTTAGACAGCAAGAAGAGACATTATTATAGGAAATATGGCTGCACTTAACAGAAATGTAACTTGAGCTAACTTATACAAAAAGACAATTTATTGAAAGGTGGCTAAAAAATTCTCACAGAATCCAATGGCAAAGACAGAGCTGGCTAGGTGAAGCTGGGTATGAAATTTTAATAAGGAAGTGTTTTCTCATCCATCCTTCCCACTCTTCTCTGGCTGTCTGCTTCATTCACTTCTCTCTTGTGGGTATCCACACCTGCTTTCTCTTTCCCAACCCCCGAGGCAGAAAATAGCTGCCTCTGGCAGATTTAAAGTTTACAGGCTTCATCCAGCAACACAGGGAGATGTTGCTCTCTCTTTCACTCTCCTTGGCTCTATTCCAATTCCAAAAGCTCTCAGGAAGAAATTGTTTGGTGGGTTCACTTGGGTCTGCCACTGGCCTCATCAATTGCAACAAGGAGTAGGGTCTCATGTTAGGAACACTGGGGCCCTCTGCAGCCATACAAGTGCAAAGGGGAAGGTCAATCCCTAAACAGGGGCGACTCCTGGAAATTAATGCGCACCACTGAAGAAGGAATTCATAGGGCCTGGAGTCCATCTTAGGCCTGTTCATGCTGATCATGCTCAGCCACCTCTCCAATGGATGCTGAACTCTGTGTTTAGTGCCTATGGAAACACCAACAGAAGGATAAGGCCCCCTCTGGACAGGGGAACCTTGAAGATCATATCCAGGTTACTCATCGCCTAAGAGAAAACATACACTAATCATCTTTGCCTCTGGACAGGTCATACATTTTTCTGTACCTATCAGAGTGTAACCTTGGGCTTATTGATTATTGGCCAAGTCTTTAACTGTTTGAGCACATAACACGTGAATGGTGGGGTTATTGGGATTGTATTTACCCTTCCTTTGTTTATGTAAGTCTCAAGGAATTTGGAGTGGTGGGTATGGACATGTACACATGGGGTATAAAAGATTTTCACAAATGCTGGTCGGTGTCCTTGGCTAAGACGAGACTCTTGGGCCCACCGGTGTAATAAACTGCACTCCATTATCTGCATTGTCCTTCTGAGTGAGTTTGTTTCCCGGAACACATGGCTACAATATTTGGTGCAATGGCGGGGAAACTCCTTACTTTGAGGAGACAGGTCTCATTTGAGGCCACCCGAGGCTTTGTGGCTTGAATCTCCTAGAGGGGGAAAGGCACCTTGCCCTTCTGGAAGAAAAGCCTTTCAATGCCTGGTTTCTTCGCTTTTGCAGGTAGTGAAGGGCAACAAGGGAACTGAGCACTTAGGTGAGGAGGAGCCCACCCGCTAGGGTGGAGGAGGGGGCCTGATCACCCCCCTGGGAGGGACCAGAAGGGAGACACAGAGAAAACTGGTTTAGGTTGGCGACAACGGCTGCTCAGCACTCCGGTCGATGGTCGTGCCAGGGATAAAGAAAGGGAACTTAGGATTTAAGAAAACCAGTCAGGAGGTGTGTCCACGCCGTTTTAGGAAATGTGCGGAGCACTCGCCACAGGGTTTTAGAAAGAGAATATCGAATTCCGTGTGCTCCTATTCCGCCCTCCACCAGGAGGTACCCATCTGCTGTGTGACCCATCATCTCCCCTGTCAGTGGAAACAGGTAGATTGGCTTCTCGGGAAGGCTCTGGGACATAGGAATCCAGAGGTAAGAAAATGGGAGGAAGCAGATCTAAGGCCACTGTATTGGAGAATATGATTAAGAATTTTAAGAAAAGATTCGATGGAGACTACGGGAAAAAAATGACACCCGGCTGGCTCTGTACCCTTTATGAAGTTGAATGGCCTTCAGTGGGAGTTGGCTGGCCACCAGAGGGAACTATGGACTTAAATCTCATAAAGGCAGTCTATGCTGTCGTTATGGAAAAGCCCGGACACCTGGATCAGTTCCCGTACATAGACTCTTGGCTGGGAATAGCCCAAGACCCCCCCAAATGGGCCTGTTTTTATGCTCCTGGCGGGGAAGGAAAAATCTTGATGGCCCAAAAGGTAACCAAGGATGAGAAGGAAATTTTACAGGACCCTGACGGAAAGGAACTTCCCCCACCGCTGTATTGGATGATGATCCCGCCAGCTAGTATCACCGCGGCCACCGGAGGCCCAACCGGAGGAACCAGCCTGAGACCCGTAAGCCTCCCGGGCTCCTCAATGGTCCCAACAGCTCCACAGGTGGTAGAGCCGCCCTCCTGGCAGGCTCCAGACTCTGGCAGCTGGAGGGACAATGAGCCCACCGGACTCTACCACCCCGGATGCTGCCACTACGTTCCCTGAACTCTACCCTCCACTCCCAGTAAGTACTCCCGGACAAGGGGCAGGAACCACTGGAATTAAACAAAGGCTCTGCTCTGCCAAAGAGCCAGAAGAAAGAATCCTTGCAGATGCCCCTCAGAGAAGTCCAGCAACCTCCAATGATAGGGGAAGACGGTAATTATCACCAAGCTCCTGTAGCTTATTACTCTCAGTCCTTTTCATCAACTGATTTACTGAACTGGCAAAACACACCCCCTCTTACTCGGTGGAACCCCAGGGCATGACTAGACTAATAGGGACTATTTTCTGCACCCATCGACCAACCTGGGACGATATAATGCAATTACAGAAGAGAGATATAGGATCAACACTGAGGCGAGGAAATGGTTACAGGAGATGGTTCCTGAGGGCACTGCTAACCCAGAGAGGCGGATAGAGCAAGGCTTCCCCACTGACAGACCTAATTAGGACTATAATACAGAGGAGAAAAAAATCCAATTAGACAGATACGGGACAGCGATTATACAAGGACTTAAAAGGGGAGCCCGGAGGCCAACGGACATGTCAAAACCAGCTGAAATAGTTCAGAAGGGGAACAAGTCACCTTCTGAATTTTACAAGAGACTTTGTGAGGCCTACAGATATACACCCATAGATCCAGAAGCTACAGGCTCCCAGATTGTTATCAATTCGACGTTTATCTCGCAAGCATGTCCTGACGTAAAACGAAAGCTTCAAAAGACCGAGGGAGTTCTATCCATGTCTAGTTCTCAGCTCATTGAAATAGCAGATAAGGTGTTTTGAACTAGGGACATGGAAATAGAAAAAAAAATATGAAAAACGTTATAAAGATGAGCAGAGGAGAACAGAGAGAGGTTTGCAATGTTGGCTGCTGAGCTTGGAAAGTCTTCCGAAGACTTTTCCACTGCCAAAGGAAAGAACCGCCACCCCCCCGCCCCCAGCTTCGAGGTCAGGACAGCCCTCCAACTGGTCCCAACAGAGGTCTCGGGCTTTATTACATCCAGATCAATGCGACCAATGCCGTGGGTTCGATTATTGAAAAAAATGAGTGCCCAGAAAGAAGGGAGAATAAACCCCTCCCGGTTGCAGAACTCACTAACATAGAAACTGAATAGGGATGCTGGGGCTCAAAGACATCAGGTCCCTGAGAGCCCATGGTAACTTTAAAACTGGGGACCAAGACACTGACTTTATAGTGGACACTGGAGTGAAATTGTCCGTGGTAACTAAGCCTGTGGTGCCACTGTCTAAAGGACAGCCGCAGTAACTGGGGTTTCGGGAGAAGAATGGGTAAGTCATTTTGCCAGCCCAGGAAATGCCAGATGGGGGGTCACCAAGTGACTCATGAGTTCCTCTATATCCCTGAGTGCCCAGTACCCCTGCTGGGGAGAAACTTACTCTCCAAGTTGGGAGCACAAGTGATTTTCTCTCCTGAAGAGAAGCCCACTTTTTGGGTGGGCACAACAACCTATTTAGCAAAACTCTTTGTGCCCCCTCAAGTCGAATGGAGGCTACATGAGACCCCTGGAGATAGACAAGGCAAGGCAACAGAGTTGGAGAAAAGGCTAACTCAGCTGTTCCCTGAGGTCTGGGCTGAAAATAATCCCCCCTGGGCTAGCCAGACACCAAGCCCCTAAAATAATAGAACTCAAACCAGGGCCACCCCGGTGAGAAAGTGTCAATACCCAATACCCAAAGAAGCCTGGATCGAGATTCTGCCTCACGTTCATAGGCTAAAGCAGGCAGGCATCCTGGTGGAATGTCAATCAGCCTGAAACACACCAATCTTACCGGTAAAGAAGGAAGGAGGACAAGACTATAGGCCTGTACAAGATCTCAGATTGGTCAATCAGGGCACTGTAACTCTTCACGAAACTGTGCTAAACCCCTATACCTTACTTAGCCTCCTCCCACCTAAGACAAGGACCTATACTGGCTTAGACCTCAAAGATGCCTTTTTCTGTATATGCCTAGCACCTGCGTCACAACCCATCTTTGCCTTTGAATGGGAGGACCCAATCAGAGACAATAAGCAGCAGCTTACTTGGACCCATCTCCTGCAAGGGTTCAAAAACACCCCAACCATCTTTGGAGAAACCCTGGTCTTGGACCTGAAAGCTTTCCAGCCTAAAAGGTATGGATGTTGGCTCCTGCAATATGTAGATGACCTATTGCCGGCTGCTGAGACTTGAGAAGAATGCTGGGAAGGGACCCAAGTGCTCTTCCAATTACTGGCAGAGGCGAGATACTGAGTGTCGAGGATAAAAGCACAAATCTGCAAGGAGGAGTTAAAGTTGCAGACATTGCCCCTTGGATCCATCACACCAGAGTGAAGAAGGCATACCACGCTGACCTGGAAGATGCCGAGTGGACCACCCAGAAGGACTCCACTGACCCACGGGAAACCAAGATCATTCTGAAGAAGAAGAAGAAAACAAGGTCTCGGATGAGCCCTCTCTAAGATAGAGCTGGGTAAACGACTCCTGCTACTCGGCCTCACCAACACAATTCTGAACCTGACCACTGTTCCTGCACAGGACAACGTCTTCATCTCATGGGCACATTCTCACGTGGACTTCCACAGCTCCTCCAACTGTTGGGGACAACGGATATCATGGTTAAGGTAGAGGCCTTAACTAATTTCACTAAACAGGCCCTTTTAGACAGTACAAAAGCCATTCAAGCCTTGAATGAAGAACAAATTCAGATAAGAAAGACAGTAATTCAAAATAGGATGGCATTAGACATACGCTGGACTGGAAGAAACACAAGCTGGAATCAAGTTTGCCGGGAGAAATATCAATAACCTCAGATATGCAGATGACACTACCCTTATGGCAGAAAATGAAGAGGAACTCAAAAGCCTCTTGATGAAAGTGAAGAAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCTGGTTCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTTTTTGGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGATAGCATATTGAAAAGCAGAATCATTACTTTGCCAACAAAGGTTCGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGCTTGTGAGACTTGGACTGTGAAGAAAGCTGAGCACCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCACTCCATTCTGAAGGACATCAGCCCTGGGTGTTCTTTGGGAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGTGAAGAGTTGACTCATGGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAGGAGGATGATAGAGTATGAGATGGCTGGATGGCATCACTGACTCGATGGACGTGAGTTTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTTGCAAAGAGTCTGACACGACTGAGTGACTGAACTGAACTGAAGACATATAGCAGCCCAGGGGGGGGGACTTGCACCATAATTAAAGTCAAGTGTTGTGTATACATACCTGACCTGTCTGAAAATGTATCCACTGCCTTGGAGGATATGTAAAATCAAGTGAAAGCCATGTCTGATGGAAATATTCCCTTTTGGACTTCAGTCCTGTCCTGGGTAAACAGAGACTGGTGAAAAACTATTGTTACTGTTGTCATAATCGTTCTAATCATACTGCTTTGTGGACCCTGCTTCTTACAAAGTCTTGTGAATTTTGTAACCCAGGGGTTGATAGCGTTTTCTCATGTGAGTGGCCGAAGGGCTAGGGTACAATATATCCCAATAAATGATGCTCATTAAGGAAATTAGGAACATCAAGTGAGGGGAATGAGGAAGGAATTCATAGGGCCTGGACTCCATCTTAGGCCTGTTTATGCTGATCATGCTCGGACACCTCTCCAATGGATTCTGAACTCTGTGTTTAGTGCCTATGGAAAGGACAACAGAAGGATAAGACCTCCTCTGGACAGAAGAACCTTGAAGATCGTATCCAGGTTACTCATCGCCTAAGAGAAAACATACACTAATCATCCCTGCCTGTGGACAGGCCATAAATTTTTCTGTACCTATCAGACTGTAACCTCAGGCTTGTTGATTATTGGCCAACTGTTTAACTGTTTGAGCACATAACACGTGAATGATGGGGTTATTAGGATTGTATTTACCCTTCCTTTGCTTATGTAAGTCTCAAGGAATTTGGAGTGGTGGGTTCAGACACGTATACATTGGGTATAAAAGATTTTCACAAATGCTGGTCGGGGTCCTTGGCTAAGAGGACACTCTGCCTTGGGCCCGCCGGTGTAATAAAACTGCACTTCGCTATCT TCONS_00105983 r 5' 646 TCONS_00105983 r 3' 6954 EMBV3_28951 AGGAGCAGAGAGTCCCATAGCTGTCCTGAGACACCGTCACCAGTCAGATCACGAATGTGA Variant GeneID:533574|ZFAND1:XM_002692835:198_cdna 139^266 6 EMBV3_14624 GeneID:533574 14 GENE ZFAND1 NULL zinc finger, AN1-type domain 1 EMBV3_38099 GCCTCGCAAGAAGGGCTTGGAACAGTGACCACCGAGCATCCCCACCCCGAGTGTTTGTAA Gene GeneID:533600|GOLGA3:XM_002694447:36_cdna Constitutive 0 NULL GeneID:533600 17 GENE GOLGA3 NULL golgi autoantigen, golgin subfamily a, 3 EMBV3_13743 CCTGACCTCAGCCTGCAGTCTCCTGAGGAGGTTGCTCAGACAGCAGATGGTGTGGACGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22787 CCAAGTTCGACCATCCGGAGGCGGCCCCCGCGCTCTGGCGGCTGCTCTTTCGTGTGCTCT Gene GeneID:100299692|LOC100299692:XM_002696797:530_cdna Constitutive 0 NULL GeneID:100299692 21 GENE LOC100299692 NULL hypothetical protein LOC100299692 EMBV3_33705 CATGGTACTGAGGCCAACCAGGTTAAATGAAGCACCTTATGTTTTCACAGGCCTTCCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02858 ATAGCCGACCTACAGCTGATAGACTTTGAGGATTTACTAACCAGACATAAAGTGTTGGTA Variant GeneID:519724|CAB39L:XM_002691787:401_cdna 594^881 5 EMBV3_04429 GeneID:519724 12 GENE CAB39L NULL calcium binding protein 39-like EMBV3_30660 GGGGAATCCTCACAGCCATCCCAGGAAGAAGAATGACGACAGCACCCATTAAAGCAGACA Gene BVV0102_221290 + 0 NULL GK000018.2:46592354-46616258 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086332 TCONS_00086335 TCONS_00086337 TCONS_00086334 TCONS_00086338 TCONS_00086336 TCONS_00086333 1 XLOC_052126 NonCoding TCONS_00086332 XLOC_052126 NonCoding NonCoding - 18:46606696-46609935 - TSS64264 479 0.538622129436326 3 0.852995676343422 0 7.62182077004581e-05 0.000230330041418515 0.000189869980864197 0.000782816804450033 0 1.0081403165278e-148 0 0 0 0 0 0 2.98582758026294e-10 0 0 0 0 4.24713473963365e-296 0 0 0.000120658194864884 0 0 0.000245827738213058 3.87506996228154e-12 0.000129929515325404 0 0 0 XR_234003.1 LOC100848837 PREDICTED: Bos taurus uncharacterized LOC100848837 (LOC100848837), 2e-11 73.4 72.54 0.286012526096033 NM_001145531.1 C7orf71 Homo sapiens chromosome 7 open reading frame 71 (C7orf71), mRNA. 1e-14 84.2 72.84 0.329853862212944 0 noncoding TCGCCTTTGATGGATCAGAGGGCCGGAGGGAGCCAAGCCTAGCGGTTTCGGGAGATAAGTAAATCGAGGCTGATTTCCCTAAGATCTCACCAGGAGTAATTGCCAAAGCTGGAATCGAATTCCTGTTGCAATTTGACTCTAGAGCCTAAGCTCCTAACAGCTGGTATATACTGTCTCTCATGCTAACAGCTAGTGTCCAGAGAGAGGGCACACATGGTCCCGGGGAATCCTCACAGCCACCCCAGGAAGAAGAATGACGACAGCACCCATTAAAGCAGACAACTGAGGCTCATGGAGTTCTGGAGGCTGGATTCAAAATCAAGGTGCCAGCTGAGTTGACTTCTCCTCAATCCTTCCATTGACTTGCAGACAGCTGCCATCTCCCTGTGTCTTCACACGGCCTTGCCTCTGCTCGTGCACACTACTGTTGTCTCTTCCTTTTCTTACAAGGTGCCATAAACTGAATGTTTGTTTACCCC TCONS_00083450 r 5' 4010 TCONS_00083450 r 5' 953 EMBV3_20540 GTGAAATCGTTTCCCAGTACTTCAGGATGTACTTAATTCATGAGCAGTGTGCTTCAGTGC Gene GeneID:100297903|LOC100297903:XM_002687717:16_cdna UTR3_Alt 2 NULL GeneID:100297903 5 GENE LOC100297903 NULL hypothetical protein LOC100297903 EMBV3_36413 TGATGGTTCGTCCAGACGTTCGATACAGGGCAGAAAACATCATGCTGCTGGAGCTGGACA Gene GeneID:508404|KIF3B:NM_001110788:952_cdna UTR3_Alt 2 NULL GeneID:508404 13 GENE KIF3B NULL kinesin family member 3B EMBV3_10442 CTTTGAGTTGCTCCCTCTTGACAACTGAACTCCCACAGTGTGATAACCTAGTGATTGCAC Gene GeneID:530961|BARD1:XM_002685563:39_cdna Constitutive 0 NULL GeneID:530961 2 GENE BARD1 NULL BRCA1 associated RING domain 1 EMBV3_26004 TCCTCGTCATGAGAAAGAACTCCTCCCCATCCTCCATTACCACCTATGAGACCTGCCAGA Gene GeneID:100300124|SCUBE3:XM_002697186:239_cdna Constitutive 0 NULL GeneID:100300124 23 GENE SCUBE3 NULL signal peptide, CUB domain, EGF-like 3 EMBV3_20614 GAGACTCACAGTCAAGACAGGTATCAGACAAGGCAGGTTGTGACAGGAGGACACATTCAG Gene GeneID:100141268|CRNN:XM_002686066:309_cdna Constitutive 0 NULL GeneID:100141268 3 GENE CRNN NULL cornulin EMBV3_21629 AGAGAGATCCCTTTGCGGTCCAGAAGGATGTTGAGAATGACAGTCCTGAGCCCTCCGACT Gene GeneID:787607|PPP2R3A:NM_001102346:87_cdna UTR3_Alt 2 NULL GeneID:787607 1 GENE PPP2R3A MGC152251 protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha EMBV3_34437 TACATGAAACCCAAGAGCAAGGAGGCCCGTATCTCTGACGAGGTCTTCACGGTCCTCTAT Gene GeneID:506202|LOC506202:XM_002689685:114_cdna Constitutive 0 NULL GeneID:506202 8 GENE LOC506202 NULL similar to olfactory receptor Olr834 EMBV3_01973 TGCCCGCAGGATTGGGTTGTGTGTATTCATGGACTGGTCACATTCTATTAGCTGCTAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19904 ATACTAACAATTCTGAGCTCTTCCCCGGCTCTGTAGCGTAAGGGGGAGAGATGTTCACTG Gene GeneID:100299092|LOC100299092:XM_002691281:358_cdna Constitutive 1 NULL GeneID:100299092 11 GENE LOC100299092 NULL similar to fasciculation and elongation protein zeta 1 (zygin I) EMBV3_40156 AGGAGTGGGAGCTCCTCGATGAAGCCCAGAGGCAGCTGTACCACACTGTGATGCTGGAGA Gene GeneID:100141141|LOC100141141:XM_002695512:325_cdna UTR3_Alt 2 NULL GeneID:100141141 18 GENE LOC100141141 NULL similar to zinc finger protein 132 EMBV3_08597 CGAACCTCCCCAGCTGAAATTTTTGTATGATGTTATAACATGGATAGCAACTCAGATAGC Gene GeneID:785489|MBOAT2:XM_002691531:567_cdna Constitutive 0 NULL GeneID:785489 11 GENE MBOAT2 NULL membrane bound O-acyltransferase domain containing 2 EMBV3_08793 AGGTAAAGTAGGATAAATTGAGGAAAATCATTTCAAGATCCTTGAATCATCTCGGCAGTG Gene BVV0102_025115 + 0 NULL GK000003.2:45448610-45563731 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10024 GCTCTTCGAGTGTGCGGACCCAAATCTTGCCATCAGTGCCATCTGGACCTTCAGAGACTT Gene GeneID:526739|GPAT2:XM_002691128:119_cdna Constitutive 0 NULL GeneID:526739 11 GENE GPAT2 NULL glycerol-3-phosphate acyltransferase 2, mitochondrial EMBV3_12484 TATACTATGTATGGATGAGAGCAATCTGAGGGCAACGACGCCGACTTTGAGACCGTCTAC Variant GeneID:280977|ACP1:NM_173978:8_cdna 296^401 5 EMBV3_11539 GeneID:280977 Un GENE ACP1 MGC128334 acid phosphatase 1, soluble EMBV3_40748 AGGGCACGTAAACCAGGAATCATCCGCTGCCTTGTGCCTCAGAACAAAGGGATCAGCTTT Gene GeneID:539920|LY6G6F:NM_001076194:180_cdna Constitutive 0 NULL GeneID:539920 23 GENE LY6G6F C6ORF21 lymphocyte antigen 6 complex, locus G6F EMBV3_28853 CCTAGGCTTGTTTGGGGGTGGTGGTTAAGAACTAGAAAGTTGCTGAAAAGACGCAGCCCA Gene GeneID:613535|UNC93A:NM_001082457:8_cdna Constitutive 0 NULL GeneID:613535 9 GENE UNC93A MGC148296 unc-93 homolog A (C. elegans) EMBV3_41825 GAGCACCCAGGTCAGTGCGGCCCCGCGTTTCTGTGTATGTGTACAAAATGTGTAAAGTTA Gene GeneID:100298789|LOC100298789:XR_083568:2_cdna Constitutive 0 NULL GeneID:100298789 Un PSEUDO LOC100298789 NULL similar to protein phosphatase 2, regulatory subunit B, alpha EMBV3_19637 ACATGTCCAACTATGATGAAGAAGGTAGGCAAAGTCCACAGACCTCAGGAGATGGCCAGG Gene GeneID:618507|LOC618507:XM_002691999:110_cdna Constitutive 0 NULL GeneID:618507 12 GENE LOC618507 NULL similar to DCN1, defective in cullin neddylation 1, domain containing 2 EMBV3_27816 TGTGCTGGGTGGAGGAGGGAGATTTCAGGAAGGCCCCAAGATCTGCTGTCAGAGTGCTCT Gene BVV0102_391247 + 1 EMBV3_12493 GK000027.2:4793817-4812448 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33639 TTCAGTCAGAAGTCCACTCTCATCAAACACCAGAGGACACACACAGGGGAGAAGCCCTAT Gene GeneID:100190914|PRDM9:XM_002683602:2_cdna Constitutive 0 NULL GeneID:100190914 1 GENE PRDM9 NULL PR domain containing 9 EMBV3_17147 AAGCATACGCCCCTCCTAATGTTGTTCTCTGCTCCTAGCTTCCATACTGAGACTCCCATG Gene BVV0102_177157 + 0 NULL GK000005.2:66604700-66950500 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36490 AAGGAAACTCAGCGGAAAGCAAAATGATCTCACCCGGTCTCTGCCGACAAAATTCCCAGG Gene GeneID:782317|LOC782317:NM_001101283:194_cdna Constitutive 0 NULL GeneID:782317 11 GENE LOC782317 NULL hypothetical protein LOC782317 EMBV3_04250 CTCCCTGAAGAATGGCAGCATGGGTAGCCCTGTCAACCAGCAACCCAAGAAGAACAATGT Gene GeneID:614125|LOC614125:XM_002689802:97_cdna Constitutive 0 NULL GeneID:614125 8 GENE LOC614125 NULL similar to Uncharacterized protein C9orf25 homolog EMBV3_12286 AATCTCAAATTCATCCTCATGGACTGCATGGCCCAGGCCTTGGTGCAGTATTTGGAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39174 TTCATAAAGGACGAGGTCAGGACACTAGGGTTTATCATCTCTGGATCGCTCTCAGTGGAG Variant GeneID:514287|MS4A18:NM_001101992:161_cdna 535^648 1 EMBV3_00476 GeneID:514287 29 GENE MS4A18 MGC148303 membrane-spanning 4-domains, subfamily A, member 18 EMBV3_07907 CAACAGATAAACATCAGGCCGGCAAAAAACCTCCCAAGGGCTATTACTTCAATACACTGG Gene GeneID:515161|ATP1A2:NM_001081524:278_cdna Constitutive 0 NULL GeneID:515161 3 GENE ATP1A2 MGC143081 ATPase, Na+/K+ transporting, alpha 2 (+) polypeptide EMBV3_33138 CTCCAAAGTGCTCTCTTCCCCTTCTGAGGCTTGCAGCCCTTGTTTGAGACACATATTGAC Gene BVT0102_116258 - 1 EMBV3_00177 GK000003.2:106792957-106806509 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179953 1 XLOC_109723 NonCoding TCONS_00179953 XLOC_109723 NonCoding NonCoding - 3:106800015-106800878 - TSS134712 863 1 TCONS_00179953_2 49 0.0741599073001159 1 0 0 0 0 0 0 0 0 0 0 0 8.75353451629383e-05 0 0 0.000267086460288833 0 0.000765111752759436 0 5.81481575231414e-05 0 0 0 0.000275158777232262 0 0 0 0 0 0.000211469390164317 0 0 0 noncoding 0 0 0 0 0.000229320185926196 0.998347892114937 -0.0449666506375682 0.446072084339725 TTTTTTAATGGAAGTTTATGAGCATGCAAACATGATCACAGAATAAGTCAATATGTGTCTCAAACAAGGGCTGCAAGCCTCAGAAGGGGAAGAGAGCACTTTGGAGTCATCAAGAGAGTTCTTGTTGGAGATACTGTGACTTTAACTGGAACTACAAGTCCCAGTAGTATTTGGCTAAGTGAAGAGGAGGAAGGTGTTCTAAGCTAAGGGAATAGCTATGGGGAAGAGAGGATTGGGCAAGTTATGTGAAATCTGGGGAGGGATCTGGTCTGATTTTCAGGCCAGGTAGTCTCATTTTTGTAAAACAAGAGGAGTTGCACTAGATTTCTAAAAGGATCCTTTTACCACAAACATCCTCTGTGATTCTTTGAAATAGGGAAGTCAAGAAAAGAAACCGATTGTGGTTTGGGACACAGTTGAGATTGAGGTGGTGGGATCATTCAAAATAGAGCACCCAACAGGAAGTTGGAAATGTGACATTAAAACTTTGGAAAGGCAGTTGAAATGAAGATACAGGTTTAAGACTCACCAAGATACAAAGCTGATGAAGGCCCACAGTGCTAAGTCACAGGAAGGAGAAAGGGCCAGAGAAGCAGAGGAGGGGGCTTGAAGAAGCCATGAAATTAGAAACAGAAAGGACCTCTGATGGCTCTGCATCTTTTCTCCTTTTGCATCTCCCTACTCTGATTTTGCAGCCTTTGGGGATCCCTGTGCATGTGTAGGCTCCCTTGGCGATATGGGAAGGCAGGAAGTGAGCTCCTTTTGCGAACAGGAACTTGGGATTACTACCTATGTGATGTTTGGGCAAATCACTCAACCTCCCTGAGTCAGAAGTTTCCTTCTTCTGGTGTGCTCTGGAGAAA TCONS_00171170 TCONS_00171172 . 3' 4248 TCONS_00171170 TCONS_00171172 . 3' 5110 EMBV3_02666 GACTGCATTCAGCCAGTGCCAAACGAGGAGCCCAGTCCCGCTACCAAATTCCAATCCATC Gene GeneID:540841|SLC10A6:XM_002688405:79_cdna Constitutive 0 NULL GeneID:540841 6 GENE SLC10A6 NULL solute carrier family 10 (sodium/bile acid cotransporter family), member 6 EMBV3_21882 AGCCTCATCGTGACAATAAACCTCCAGTTGATGAAAAAGGACCCCAGCTGTTTCACATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04074 GAGCACAGCCACCATTCAAGTATCCTCTGTGTTCAGCTTGCCTTTCTGTGATGCCAGTGT Gene GeneID:509261|LOC509261:XM_002685874:27_cdna Constitutive 0 NULL GeneID:509261 3 GENE LOC509261 NULL similar to Olfactory receptor 10J4 EMBV3_15031 GCAGTTGACTAAGTACCAGCATCAGAACTCTCCCACCCTGTATTGTCAGCACTGTGTAGC Gene GeneID:504355|RPRD1A:NM_001075156:70_cdna UTR3_Alt 2 NULL GeneID:504355 24 GENE RPRD1A MGC139907 P15RS Regulation of nuclear pre-mRNA domain containing 1A EMBV3_43732 TCCCTCGGCTCCCTGGTCACCCCGGTTGAGCTCAGTCCCCAAGCTGAACCCCAGATTCTT Gene GeneID:100139150|LOC100139150:XM_002695863:341_cdna Constitutive 0 NULL GeneID:100139150 19 GENE LOC100139150 NULL hypothetical protein LOC100139150 EMBV3_22551 CGATGCCAGTAAGAACGAGGAGGATGAAGGGAAAATGTTTATAGGAGGCCTTAGCTGGGA Variant GeneID:527471|HNRNPD:NM_001098064:16_cdna 482^538 1 EMBV3_41644 GeneID:527471 6 GENE HNRNPD HNRPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) EMBV3_14503 GCTTGTGAATCTGTAGTCTGGGCAGGGCTTGGCAGGTAAGACTTGTCTTTGTTCCATGTG Gene BVV0102_186080 + 0 NULL GK000025.2:21028463-21080468 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00148524 1 XLOC_090404 NonCoding TCONS_00148524 XLOC_090404 NonCoding NonCoding - 25:21042607-21042901 - TSS111059 294 0.996598639455782 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.98352528702487e-05 0 8.53430574415008e-05 0 0 0 0 0 0.00171067731919534 0 0 0 0 0 0 XR_227591.1 LOC101903611 PREDICTED: Bos taurus uncharacterized LOC101903611 (LOC101903611), 7e-09 64.4 84.48 0.193877551020408 0 noncoding 0 0 0 0 0.0333354854218167 0.769467363547142 -0.00702645567023898 0.91497349640104 GAATGCTCACCCTGGGAACCCAGCCACCATGCTGTGAGGAAGCCCAAGCCACACTGGCAGGGTCACATGGAAAGTGGTCATGCCTGAGACCCTGAGCCCTGGGCCTTGGCTGAACTCCAGCTGGCAGCCAGCACCAATTTGCCAGCCACATAAGTGAGCACTCAGAAAAGGGTCCCCCACCCTTCTGTCCTTCCACCCATTGAGACACATGGAACAAAGACAAGTCTTACCTGCCAAGCCCTGCCCAGACTACAGATTCACAAGCAAAATAAATTGTTATGTGGTTTTAATCCA TCONS_00146490 TCONS_00146491 TCONS_00146492 TCONS_00146493 TCONS_00146494 TCONS_00146495 . 5' 14146 TCONS_00146490 TCONS_00146491 TCONS_00146492 TCONS_00146493 TCONS_00146494 TCONS_00146495 . 5' 14146 EMBV3_23502 ACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGGCTG Gene GeneID:510459|HOXA9:NM_001105617:1_cdna UTR3_Alt 1 NULL GeneID:510459 4 GENE HOXA9 MGC155055 homeobox A9 EMBV3_41654 GCAGACAAGGGCAAGTGCGGTCTACCCGAGGGGCCCCCATGGCGTCTGGACGATGGAGGA Variant GeneID:535416|SIRT6:NM_001098084:60_cdna 73^200 2 EMBV3_34063 GeneID:535416 7 GENE SIRT6 NULL sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) EMBV3_06615 CCTCTGCAAGACTTTTCTTGGTGATGAGGGTTACCTTGATTTCTAGTCAAATCAGTAGGG Gene GeneID:100125936|CSMD3:NM_001105499:2_cdna Constitutive 1 NULL GeneID:100125936 14 GENE CSMD3 MGC148935 CUB and Sushi multiple domains 3 EMBV3_03461 TCCTCACAAGGCCACCTCCCCACACCGAGTCTTATAGCCAAGTCCTTATTTTTCTCACTG Gene GeneID:507713|JPH3:XM_002694758:519_cdna Constitutive 0 NULL GeneID:507713 18 GENE JPH3 NULL junctophilin 3 EMBV3_16030 CTTGCTCCGTACCTTCAGCTTTTTGGGCTTTGAGATTGTGAGACCGGGGCATCCCCTTGT Gene GeneID:506973|OAZ1:NM_001127243:37_cdna Constitutive 0 NULL GeneID:506973 7 GENE OAZ1 NULL ornithine decarboxylase antizyme 1 EMBV3_00365 AAGACGCCCGAGGCGACCGGTAAGCTCCTTCTCACATCAACGTCCTTCTTCCAGATTTAT Gene GeneID:100337433|LOC100337433:XM_002699584:68_cdna Constitutive 0 NULL GeneID:100337433 X GENE LOC100337433 NULL SRY-box containing gene 3-like EMBV3_21171 ACATTAACTGTGGTTGCCCTCAGAGGTGGGCACTGGCAGAAGGTTATGGAGCTTGCTTAA Gene GeneID:511017|DUS4L:NM_001101937:42_cdna UTR3_Alt 2 NULL GeneID:511017 4 GENE DUS4L MGC155137 dihydrouridine synthase 4-like (S. cerevisiae) EMBV3_31703 CCTCGACAATGTTGGCGGATCTACTGAAACGTGGGCTCTATAGTTCCTCTAGAAGTGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12536 GCTGCATTCTTCACCCTCTTTCGGGGCCTGATGCTGGTGAATATGTTCTATGTGCTGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21574 CTGGACTCTGGCCTTATACCCCGAGGCTGCCAGATTTGCATATTTCTCTGTTGCTCTCTT Gene GeneID:515536|ABCG5:NM_001024547:113_cdna Constitutive 0 NULL GeneID:515536 11 GENE ABCG5 NULL ATP-binding cassette, sub-family G (WHITE), member 5 EMBV3_26143 GCGCACTCAGGTACCAATCTCCACCCTCCGGGATCTCCGCCTGGCCCCCAGTCTATTCCA Gene GeneID:787301|LOC787301:XM_002688837:147_cdna Constitutive 0 NULL GeneID:787301 7 GENE LOC787301 NULL similar to mCG141871 EMBV3_11105 CCTCACTCCTGAGGGCAATTCAGTAATTGTGGGGAATACTCATGGGCAGCTGGCAGAAAT Gene GeneID:505875|WDR74:NM_001014854:46_cdna Constitutive 0 NULL GeneID:505875 29 GENE WDR74 FLJ10439 WD repeat domain 74 EMBV3_13980 CTGGAGACGAGGAGGATGGGAGCCCCATCGACAAATCTGACCGCCCCGTCTGCCGACACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32687 ACCGCGTGCTGTTCCGCCTTGGGAGGATCGAGCCTGCAGGAATGGGCTCCAAGGCCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22649 GTCCCTGGTACCTTGCCTCAAATTACAGTCCCCAGCATCAGTGTCCTCTGGAAACCTGTT Gene BVV0102_249385 + 0 NULL GK000008.2:29525224-29553186 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00230521 1 XLOC_140011 NonCoding TCONS_00230521 XLOC_140011 NonCoding NonCoding - 8:29540837-29541439 - TSS172025 602 1 TCONS_00230521_1 61 0.124584717607973 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000152144732544899 0 0 0 0 0 noncoding 0 0 0 0 0.0452116152027501 0.752260092910249 0.0229902816318286 0.686992939977295 ATTGAGATTGAGAGGTGGATTATTTGCTGTGTTGAGTCAATGTGTTTTTCATAGGTTGCAGGAATGGGAAAGCCAGTAATTTTTGGATGACAAACACAAAGTTAAGCTTGTTTCACTACGAACTTTGGTTGCCGACAGGAAAAGGACAAACCTTGGTTGTCTGGGGCAACTTTGGCTCTCGTTACCAGAGGGTCTGCAGTGGGCAACACTGGAGTTCAGTGCTTTTCAGTCTTCAAGGTGCACGTGTAGGCACCCCTCGTAACCCTTCTTAAAACGCAGATACTGATTCAGCACGCCTGAAATGGCGCGTTTCTAACAGGTTTCCAGAGGACACTGATGCTGGGGACTGTAATTTGAGGCAAGGTACCAGGGACCATCCAGTGTGAGTTACGGGTAGAGAGGCCCGCGGGACAGCCCTTTCGAAGGAAAGAGGATAAAGGCGATCCTTAAAGAAAGGCCCCTCTCCAGTCACTCAGGAGAGTGGGACAATGGTGTGGAAGGAGGAGGGCCTGGGCAAAGCTGGGAAGGTGGCAGTCAGGGAAGGCGGCGGCGCCGAGGTGCAGCAAGTGCTAGCGTTCGGGTAGCGGCGGTCCGGGAGGCAC TCONS_00224816 . 5' 209 TCONS_00224816 . 5' 209 EMBV3_43602 GAGCCACGAAATCACGTCCTTCGGGATTCCAGGAACCGTGGGAATGCGATCTTTAGATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33600 GCAGAGCCTGCGAACAGCCCAGCTTCCTCTGCTAGACTCACCCAGTATTGGTTTAAATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23950 AAAGTAAGAATTGGAAATCTGAACACTGGATGGATATCAATGAAGACCCATGGGGAAAGG Gene BVT0101_062025 + 0 NULL GK000029.2:29420347-29429082 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163499 TCONS_00163496 TCONS_00163494 TCONS_00163495 TCONS_00163497 1 XLOC_099920 Coding TCONS_00163499 XLOC_099920 Coding Coding CHEK1 29:29402417-29422256 j TSS122513 3943 1 TCONS_00163499_1 410 0.344407811311184 11 0.80179453573949 0.000394290381454183 0.000388774951909425 8.28397093211101e-05 0.000152954083655926 4.20603856087758e-05 1.18770305540955e-62 4.73283836252302e-05 2.43321391936988e-05 0.000149904532244987 0.000318824879514091 2.11868652773429e-05 4.29673949614176e-05 5.05420112453338e-98 0.000189270307137794 1.34738885697479e-44 0.00293465381472572 0.0022526316681063 0.000691083643634401 0.000147455276660272 9.12135065199578e-05 2.79267752068256e-05 0.00088530400448278 0.0019234146223152 0.00212337516681658 0.00032688333977367 0.000252326280746022 0.000163460230723707 0.00157183322275206 1.32793033932874e-06 0.00142754319068418 XM_005226795.1 CHEK1 PREDICTED: Bos taurus CHK1 checkpoint homolog (S. pombe) (CHEK1), 0.0 2091 99.91 0.294699467410601 NM_001244846.1 CHEK1 Homo sapiens checkpoint kinase 1 (CHEK1), transcript variant 4, 0.0 1269 82.86 0.317778341364443 TCONS_00163499_1 sp|O14757|CHK1_HUMAN CHK1_HUMAN Serine/threonine-protein kinase Chk1; 0.0 799 82.98 0.997560975609756 3 coding 0 1 1 1 0.078552940918423 0.575139363086907 -0.0109787103942758 0.839319565115087 GGCCGCCGCGGGACTAAGTGGAGTCATGGCAGTGCCCTTTGTGGAAGACTGGGACTTGGTGCAAACCCTGGGAGAAGGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGAAGAACTGAAGAAGCAGTTGCAGTGAAGATTGTGGATATGAAACGTGCCGTAGACTGTCCAGAAAATATTAAGAAAGAGATCTGTATCAATAAAATGTTAAATCATGAGAATGTAGTGAAATTTTACGGTCACAGAAGAGAAGGCAATATCCAATATCTATTTTTGGAGTACTGCAGTGGGGGAGAACTTTTTGATAGAATAGAGCCAGACATAGGCATGCCTGAACAAGATGCTCAGAGGTTCTTCCATCAACTTATGGCAGGGGTGGTTTATCTGCATGGTATTGGAATAACTCACAGGGATATTAAGCCCGAAAATCTCCTATTGGATGAAAGGGATAACCTCAAAATCTCTGACTTTGGCTTGGCAACCGTGTTTCGGCATAATAATCGGGAGCGTTTGTTGAACAAGATGTGTGGTACTTTACCATATGTTGCTCCAGAACTTCTAAAGAGAAAAGAATTTCATGCAGAGCCAGTCGATATTTGGTCCTGTGGAATAGTACTTACTGCAATGTTGGCTGGAGAATTGCCGTGGGACCAGCCTAGTGATAGTTGTCAGGAATATTGTGATTGGAAAGAAAAGAAAACATACCTCAACCCTTGGAAAAAAATTGATTCTGCTCCTCTAGGGGCAAAGAGGCCCCGGGCCACTTCTAGTGGTGTATCAGAGTCTCCTGGTGGATTCTCTAAGCACATTCAATCCAACTTGGACTTCTCTCCAGTAAACTGTGCTTCTAGTGAAGAAAGTGTGAAGTACTCCAGTTCTCAGCCAGAACCACGGACAGGCCTTTCGTTATGGGATACCAGCCCTTCATACATTGACAAACTGGTACAAGGGATCAGCTTTTCCCAGCCTACTTGTCCTGATCACATGCTTCTGAATAGTCAATTGCTCGGCACTCCAGGATCCTCACAGAACCCCTGGCAGCGCTTAGTCAAAAGAATGACACGATTTTTTACCAAATTGGATGCAGACAAATCTTATCAATGCCTGAAAGAAACTTGTGAGAAATTGGGCTATCAGTGGAAGAAAAGTTGTATGAATCAGGGTGATGGATTGGAATTCAAGAGACACTTCCTGAAGATCAAGGGGAAGCTGAGTGATGTTGTGAGCAGCCAGAAGGTTTGGCTTCCTGTCACATGATAGATCCACTGGCTCTGGGATTCCTGGTGAATATAGTGCTGCTATGTGGACATTATTCTTCCTAGAGAAGATTATCTATTCTGCAAACTGCAAACAATAATCCCTGAAGAGTTGTCTTCCCTCTAGCCAAACATTTTCCAATTCTTTTGTATATTCTTCATACAAATAATAATCTATATCCTAACTGTAAGTGAAACTTTGGGGAAAGGGTAGATAGAATTCATTTAGATATTCCTTCATTTGCATTTAGCGTCTGAATTGAGACCCGCCTGGTGGAAACCATGCTCTGGGGTTACATGAGTTTACCAGCTTTTATACCAATATAATGAAAAACGATACTCTTGTCCCATTCTACCAAAACATTTGGTTCCATCCAAAAAGTACATATTTCCTGCACATTGACTTAATCACATGGATAAACTAAAAAAAAAAAAAAAACCTTGTTATTTGTGGGACAGTAAATTTATCAGTCAGTCTGTGAAGTGAAGCCAGCTTCAAAATGTATACCCCAAGATTTGTACTTAAAAGGGCCTGACCAGGTATATAAAGCTGTTTTTGAACAATAATTAAAATTGCAAGTAGGTATGTTTTTTTCTGGTATAGTTAATATGTATGATTGGTCTTTCAAATAGAAGTTGAGCATAAACTCTAGTGCTTAACTACCTTTACTTGGAATTACTGTTGCACATATTAAATATTTTTCTATATTATTTTCTACTTTCACAGCCATATTTTAATTCTTTATTACATAAATAAATTCTATGTTGAAAATGAATAGCTAACTCTGTAAACTCATTGGTGACTAAACTTCTAGATGGTGAGGAATAAAAGAGGTTGGAGATGTAAGAAAGTAATGGAAATTGATCTGATTCCTGGCTTTTTTCACCTGTTAATTTTAGTAAGATTTTGTTCTTTCAATGAAATTTATATTAACATTTGAATGTGTCCCAGTATTCCCGTTTCTTGGTGATTTATAAATATTAGCCAGTTATTCTAGTCTGAAGCCAAGAACATGAAACTTTATAGAGTTTATCATATATTGTTTATCTTGGTAAATGGTATTATTGTCGTATAGCTATTGTTTTTCCAGTAGTCATGTACAGATGTGAGAGCTGGACCATGAGGAAGACTGAGCACCGAAGAATTGATGCCTTCGAACTGTGGTGTTAGAGGAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCAATCCTAAAGGAAATCAGTCCTGAATATTCCATTGGAGGACTGATGCTGAAGCTGAAACTCTAATACGTTGGCCACCTGATGCAAAGAGCTGACTCATTTGAAAAGACCCTGATGCTGGGAAAGATAGAAGGCAAGAGGAGAAGGGGACAACAGAGGATGAGATGATTGGATGGCATCACTGATTCAATGGACATGAGTTTGAGCAAACTCTGGGAGATTGTGAAGGACAGGGAGGCCTGGTGTGGTGCAGTCCATGGGGTCAAAAAGAGTCAGACATGAGTGACTGAGCAACAACAACCCACAGGAGGAATAAATTTAAACCTGCAGGCAACTTCTAAGAATTAAGCCAGTATATTCTCAAATAAGAAATTTTGTTCTTGAGAATTGTCAACCAGGGAATTCTCTGGTGGTCCAGTGGTTCAGACTCCAAGCTTCCACTGCAGGGAGCGAGGATTTGATCCCTGGTTGGGGAGCTAAGTTCGCACGTGCCACACAGCATGGCCAAAAGAATAAAAGAAGAGAGAAAATTGTCAGCCAACCATTGGTAACTCTCATAAACAAAGTTGTCCCTGGCTTTGACCTTTCCCCTGAACTCCAGACTTTTACAGCCATGGTCTACCTGACATTTCCCCTTGACTTAATAGTCATCTCCTGACCAAATACAACTTTTGATCCCTGTCCTCCAACCTACTCCTCCCTAGTTCCCCCCACCTCAATAAGTGCTACATTTAGCCCCCTAGTTTCTTAAGCCAAAACTCTAGAAATCATCCTTGATATGGTTTTCATACTCTGAATTCAGTTCAGCAGCTCCTATTTAATTCAGCAAATATGTACAAAATAGGGCTTCCCAGGTGACGCTACTGTTAAAGAACCTGCCTCCCAATGCAGGAGACATAAGAGACTCAAGTTCAATCCCTAGGTTGGGAACATCCCCTGGAGGAGGAGGAGGGCATATGGCAACCCATTCCAGTATGCTTGCCTGGAAAATCCCATGGATAGAGGAGTCTGGTGGGCTGCAGTCCATAAGGTCACAGAGTCAGACACAACTGAGCCACTGAACAACAACAACATGTGTATTTCCATTCTGTGACTTATTTCACACTTCATATAAGATTGTAGTTTTAATGTAGTTTAAGACTTGCCTCTGTCTAGCAGTTTTTGTTTCCTACTTCAACACTCATTCCCTACTTCAAAATCATGAAGATTTTCTTTTATGTTATCTTCCAAAAGCTTTATAGTTTTGGCTTTCACCTTTAGATCTACGGTTTACCCAAAAATGATTTTTGTGTATAATAGGAGGTCAGGTAGCATTTTTTTCCCCATATGGCTATCTAATTTAGCACTGGTGAAAAGATTATCCTTTCCCCATGGGTCTTCATTGATATCCATCCAGTGTTCAGATTTCCAATTCTTACTTTTTACAGTTTTTTGAATCAGGATTGAAATAAAGTCCATACTAGAAATTGA EMBV3_26348 GCAATGCACAGCCTGCAAAATCTTAGTTCCCTGGAATTGAACCCGTGCTCCCTGCAATGG Gene BVT0102_410184 + 0 NULL GK000008.2:86817468-86849193 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28517 AGGAAACAAACAGCACCGACAGCTCCAGGTCCCAGTCCCCCTCCAAGTTTCTGATGATCC Gene BVT0102_362587 + 1 EMBV3_02206 GK000020.2:20740982-20811832 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114759 TCONS_00114757 TCONS_00114758 1 XLOC_069345 NonCoding TCONS_00114758 XLOC_069345 NonCoding NonCoding LOC100848745 20:20783611-20811521 j TSS85503 386 1 TCONS_00114758_1 62 2 0.986240997527679 0.000465398114992189 0.00134123928990849 0.00114538134907296 0.00150833584511486 2.75431742771541e-05 0.000311301971336752 0.00165620001342604 0.000758883281098353 3.79838058037917e-09 0 0 0 0 0 0 0 0 0 0.0026327613505521 0.000365394947599938 0.000118095394835404 0.00126881948064391 0 0 0.000901372945498619 0.00160920680860378 0.00353496414585328 0 0 0 0 noncoding TCTCCCTGTTGTCCTGAGAGGTACTCTTTTCACTTAATTTACTCCAGCACCACTGGTGGTTTGCAGTTTCCAGTTTCTTCCAGCACTCCTTAGAAGCAACTTCTTTGCACCTTGTCAGAGATGCCGGCACCACCAAGCAGCAGCCTTCCCTTAGTATCTGAGAACCAGCTCCTCCAGCACTCCTCCAAGCTCCCAAGGGACCAGCAGGAAACAAACGGCACCGACAGCTCCAGGTCCCAGTCCCCCTCCAAGTTTCTGATGATCCCCAGTCTTAGTTCATCAGCAGGGTACCCACCAGGAGGGAACTAATGGCTACTACTTACAACTGCTATGGATGTGAGATCTCTTAGCTCTTATCATGTTGGCTAACATCTTCAAGAAAACAT EMBV3_07990 CAGAGGAGGGGCAAAGAGAGCTGGGGAGGTATAGAGACCTAAGACAGAAAGGGAAATCCA Gene BVT0101_013899 + 0 NULL GK000018.2:56034294-56038882 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12705 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26792 CGCCTTCATGGAACATGAGGCTTCATTTAGCAAGGCTTGAGTTACATCTTACGAAAAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11500 GATCCCTGCTCTGTGTTCAGACAAAAGATCCCAGTTGCTTTGAATAGGCTGGAGTTAAGG Gene GeneID:613996|CARKD:XM_002691991:87_cdna Constitutive 1 NULL GeneID:613996 12 GENE CARKD NULL carbohydrate kinase domain containing EMBV3_04315 AGCCCAAGAGGGACCCTTCACCCGTGTCTGGTACAAGTACGAGCTCTGCCCGTTCCACAA Variant GeneID:508713|GNPTG:NM_001017428:99_cdna 124^178 2 EMBV3_41882 GeneID:508713 25 GENE GNPTG NULL N-acetylglucosamine-1-phosphate transferase, gamma subunit EMBV3_22818 TGCCTCATCTGGTTCGGCTGTAAGCTTGTCCTGAACCCGTCAGCAGTAGACATCAACTTC Gene GeneID:100336514|LOC100336514:XM_002687998:129_cdna Constitutive 0 NULL GeneID:100336514 5 GENE LOC100336514 NULL megalencephalic leukoencephalopathy with subcortical cysts 1 gene product-like EMBV3_27258 AAGAAAGAAATCATTGTGGGGCTTCTGCCCCTGCTGATCCACCTTCTGCCAATCATGACC Gene GeneID:504647|RAD9A:NM_001014848:503_cdna Constitutive 2 NULL GeneID:504647 29 GENE RAD9A NULL RAD9 homolog A (S. pombe) EMBV3_40262 ATGCACCCAACACGGGAGCACCACAGTACGTAAGACAACTGCTAATAAGTATGAAAGGAG Gene BVV0102_256171 + 0 NULL GK000010.2:24358154-24453896 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00010367 TCONS_00141615 TCONS_00165811 TCONS_00197973 TCONS_00141355 TCONS_00056147 TCONS_00019991 TCONS_00239410 TCONS_00141464 10 XLOC_142855 XLOC_005918 XLOC_086043 XLOC_100651 XLOC_119632 XLOC_085783 XLOC_033950 XLOC_010669 XLOC_146076 XLOC_085892 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_18859 GAGGGGCCATATTCATTCTTTGATAGGAAATGAATGAATTAGGAAGATTCTACTCACTTC Gene GeneID:532845|COG3:XM_002691827:517_cdna Constitutive 0 NULL GeneID:532845 12 GENE COG3 NULL component of oligomeric golgi complex 3 EMBV3_35555 GGATCCCTTCTGGACAAGATGCAGGGCTATGTGAAGGAGGCCACCAAGACCGCCAAGGAT Gene GeneID:408009|ApoC3:NM_001001175:35_cdna Constitutive 0 NULL GeneID:408009 15 GENE ApoC3 MGC137023 apolipoprotein C-III EMBV3_23613 GGACAGCGGGGACGCCGCCCAGTCCGCCGGGAGCTTGTTCTTGGAGAACAGACCATCCTG Variant GeneID:286838|NDST2:NM_174777:248_cdna 112^209 1 EMBV3_28300 GeneID:286838 28 GENE NDST2 MGC154982 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 EMBV3_40592 CCAAGACGCGGAACAGTAATAACAATAACACGGCTGGAGACCTCAGTTCAGGGAGGGGGA Variant GeneID:530659|LEMD3:XM_002687649:828_cdna 227^927 3 EMBV3_09087 GeneID:530659 5 GENE LEMD3 NULL LEM domain containing 3 EMBV3_38449 CTGTACTCACAGCTGGTCTACTCTGCTCCCACCCCCTTTTTCCACACCTTTGCTGGAGAT Gene GeneID:100336547|LOC100336547:XR_084145:210_cdna Constitutive 0 NULL GeneID:100336547 X PSEUDO LOC100336547 NULL Wiskott-Aldrich syndrome protein-like EMBV3_09123 AACTCAAAGTATTGCTTAAAAGATGGCTCTCTGGGAATAAGCTTGGGGCTCCATGGGTCC Gene BVV0102_166100 + 0 NULL GK000008.2:88708957-88968213 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226194 TCONS_00226193 TCONS_00226190 TCONS_00226192 1 XLOC_137943 Coding TCONS_00226194 XLOC_137943 Coding Coding DIRAS2 8:88705943-88710694 j TSS169171 3950 1 TCONS_00226194_2 199 2 0.168842105263158 0.0078944912749973 0.00830191468628297 0.00642934878345714 0.00459837193103151 0.00399977562484043 0.00344314003337887 0.00484712233759359 0.00527500418494605 0.00842856409052481 0.00259049266425338 0.00174226339659563 0.000708561502728371 0.00223642059008429 0.00442545274982714 0.00292213308082057 5.09964701802941e-11 2.79542691585156e-11 1.60566505433345e-05 0.00882827709645666 0.0063168582463641 0.00299738280014366 6.60411274418738e-05 5.36228954495485e-05 0.000332131323556637 0.0100015210175645 0.00827850112814367 0.00315894674779357 0.000241252169800585 0.000219166277756157 0.000178248408264454 NM_001192064.1 DIRAS2 Bos taurus DIRAS family, GTP-binding RAS-like 2 (DIRAS2), mRNA. 0.0 3925 99.86 0.552658227848101 NM_017594.3 DIRAS2 Homo sapiens DIRAS family, GTP-binding RAS-like 2 (DIRAS2), mRNA. 0.0 1299 75.81 0.455696202531646 TCONS_00226194_2 sp|Q5PR73|DIRA2_MOUSE DIRA2_MOUSE GTP-binding protein Di-Ras2; 1e-143 403 97.99 0.994974874371859 2 coding 1 1 1 1 -0.000937663951639328 0.994496946021288 -0.159236172918338 0.0567987652168254 GGATTTCATGAGTTAATATAAACATTGTGTGCTTCCTAGTTAATCGTTGGAGCCTGCAAACAACATGCCGGAGCAAAGCAATGATTACCGGGTGGCCGTGTTCGGCGCAGGTGGTGTTGGCAAGAGCTCTCTTGTCTTGCGGTTTGTGAAAGGCACGTTTCGGGAGAGCTACATCCCCACTGTGGAAGACACGTACCGGCAGGTCATCAGCTGTGACAAGAGCATCTGCACCCTGCAGATCACGGACACCACGGGCAGTCACCAGTTCCCGGCCATGCAGCGGCTTTCCATCTCCAAAGGGCATGCTTTCATCCTGGTTTACTCCATCACCAGCCGGCAGTCTCTGGAGGAGCTCAAGCCCATCTATGAGCAAATCTGCGAGATCAAAGGGGACGTGGAGAGCATCCCCATCATGCTGGTGGGGAACAAGTGTGACGAGAGCCCGAACCGCGAAGTGGAGAGCAGTGAGGCCGAGGTGCTGGCTCGCAAGTGGAAGTGCGCCTTCATGGAGACCTCGGCCAAGCTCAACCTCAACGTGAAGGAGCTCTTCCAGGAGCTGCTCAACCTGGAGAAGCGCAGGACCGTGAGCCTCCAGATCGACGGGAAAAAGAGCAAGCAGCAGAAAAGGAAAGAGAAGCTCAAGGGCAAGTGCGTGGTCATGTGAACCGCCCTCCCGTGGGAGCAACGGTTGTGTGTCCCCCCTCTTTGCCCCTCCCCCTCCCACGTGACACCCGCAGTCGTCAGGGTAGCATGTCAGACGCCCACATGTTAAATATTGCATTTTGACTGAGATGTGCCCAACTGTCCTCAGAGGGCATTTCACACCACCACCGATAAGCACCCCCTCTCCAGAATCAGGGAATCTGACAGATGCTTAAAATGAAAACCAACACGCTTGGCATCGCAGGAAACCCAAGGGACATCAGCCATTTTTGGAGGCATCCTTGGCCCTCAGGAGGCAGGAAGGCTCGTGCTGGCGGAAGGAGAATGTGCTTTGCTGATAGCAGGAGGTACCATCTGGATACATATGAGAGCATTTATACACATTAACCCAGAGCTGCAGGCACCAACCCCCAAGACCAGGCGTCCCCTCTGCTCCGAAGCCAGTGACATCCCTGGGGGATGGGAGGGGCAGGAGGAGGTGAGAAGACCAGGTCAAAGCTGTTCCCTTCTATGGTTCTTTAACTGAATTAAATGTAATACAGCTGACCTGTGAGCCTTGCCACTCTGAGGGGATGTCCTCACTAGCCTAGTTATTAGCAGGTATCATTTTAACCTTTTAGAGTATTTCTTTTCACATACAGTGGTGAATTCACTAAGAGTATGCCACTCTGTCAAAAATTCAATTTCCATTTGAAACGTTTGTGTGAGGATATTGTGACAATACTGAAACATCACAATAATATTTTTGTGTGTTATATTTTGAGAGTTTTAGAAACGTGAAGTTTCCTTCCTTTGACCCATGAGGGGTATAACTCTTACAGCCCTTAGATTTTAAATAAAAGCAATCAAAGTAGCTATTTTTTAGACATTTTTTGTCCTCCAACATGATCTTTTTTTTCAATAACTCGCTCTATCTCCAACTGAGTAACAGCCAATAAAGGCCCTCTGAAGACCAGAAGCACATCCATTTTCTAACAGACGTAGACACATCTGTGCCATATTTTGCACCTTAATGAAATACTTTGAGACAGAAGTTGTTTGCTGTGTTTTTGATTATTATCTCTAACAAGTATATTCCTGGAAAATCAGTTCAAGTAATCAATTATGGTGCACGTTCCTTTAGAAATGTCTTCTAAGAGCTGGCCTATGCTGGGTTCACTCTGGAATAAATCTCATGTGCATCCTCAAACCACTGCTGGTTGCTGCATGCTGGCTGGAGACAGGTCGGGCAGGCCTCTGTCATGGGCAGAGCACAGACTACTCAGCTAATTCTTCTGCTAGCATCAAGGCTGCTTTGGAGCTGCTTCCTGAAAGTTCCCACTGACAGAGCCTATAAGTTTTCCTCTTGGTTCCAGTCTGCATCCCACTCTGGCTTCCTCTGGAATGTTCCCTTGCAGAACACCTTCCTGTTGCCTGCCTGGCAGGCAGAGTACAGGGATGCTTCCAGGCTGCTGGGCAGCAGTGCTAGCTGGTACTGAGTGGTCAAGTTCAGGACCTTTATGGACACCACTCTCTCCTGTACTTTCTGTGTTTTCCCTGCCCCTCCTGATGTGGCCACTTCTGGGCAGCTCTATGCTCTCAACAGATCCTAAATTCCCCCTTTTGGTTTGATTTTCTTGCCTTCCCCTCATCCCTTCTGCTCTGCTAATAACTCATCTCTGTGATGTATTTTGTGTGTGGGAGGCACTTTGCAAGCCATTGGCTTGATAGTCTGCCCACCACTCTGGCCTCCTAGAATAGAACTTGGGCAGGGAGGGTAGAGATGGCTGGCCTGGCCACCAGTGGGGATCAGGGAAACCCAGAACTCCTGGTCCAGAACCAAGTCCCTCTCCAAGTCCTAACAGCCACACCCTCTGCTGGGCTCCTTCTGTTCCAAGTGACTGTTGCACAGCCTTCACAGTGAGATCTCATCGCTGAATTTTCTAGAACATTTGCTTTTCAACTTATCCCTATATATATATTTTTTGTTCTATTTCCATTCTCAGAGAGATGCCATCCATTTGTAATTTAGATTTGGGTTAAGTGGAAGAAGAAATGGGACTTCATGGCCAAAATGAACTGTAGAGATCTTAGGTGGGTTAAGCTAATGGTCAAATGTGATGTCTGCCATGAGCTGTCCACAAGGCTCCCAGTTTGCAGGCTCCCCATGACTGCCACATTACTCCTGATCCAAGTTAGAAATTCATTTAGCCCTCTCAAGGCAATGTCTACATTTTTCAGTGTTTACAATTTTATCAATGTGAGAAGCTTGTAATTATTGAAAATCTGATGTCATTCAGGACACATTTTGTTCCCTTGTATTTTGCCTGTGAGTTTACTGGAAGGCTATTGATGCCTCAATCATGGGTCTTTGTTCTGAGATCATTTTTTATGAACTGCACTGAGGGTATAGATGATTATCTCAAAATAATCTTTTCAAAGCTCTCCAACTGACACTCAGGGCTCGAGGAGTTAGTTCCACTGAATCAGATGTTTTTAGCATTTATGTGGCCCCATCCTCGAATAAGTAGTTGTGATTCTTGAGGACACATCCTACCTTGTGTATGGACACAACAGATTTTGACCTCGCCTCAGTAAGTTACAAAACTCAAAGTATTGCTTAAAAGATGGCTCTCTGGGAATAAGCTTGGGGCTCCATGGGTCCCATTCTGTCCCTGCCAATCCCTCTTCCATCTGGTGACAAGCCATGGGCGTGCCCTAGGCATGCATGCAATACAGCAAGACCAACTCAAGAGCAATATTGAATTGTTCATTCGATCTAAAATTATATATATATATACATATATATATATAATTTCTCTTCCTGCATTTTTGAAGTATAAATTAGTACGTTGTATATATCTGTAAGCTAGTATATTTGTTTCACCATTTGTAATATTTAAGAAATACTCTTTATAGAACAAAAGTATTAAATATTCAAAAAATGCTCTGTGATACTTAATTTTTTTTTCAAAATTTGTAATGTGTTGCTCCTACATAAGATCTCTGGAAGTATCTATAACTAATGGGACACATGTAAACCCTCGAAGATCCATCCTGAAATTCAGTGTCCCACAAAGATAGTGTGTGGACAGAGCATTTACAAAGCATGACTTTTATACGTGTGGGATGGCAATGTGTATATTTATATTTAAGGTGTATTTACTGTTACAATTCCATTATCTATTTTATCTACAGTTATAAAAATCACTCTTGCATATGAGTTTCTAGTTGCCAGTGATGTTCTGAAAACAATAAGCATATTAAAATAAAGCTTTGGTTCTGACACACAGCTGGAAGGTGGTGAT EMBV3_42060 CAGTTTACATCAAGTGGTGCTACAGCCCTCCCGGCTCTCGCCTCTGACCCAAAGCCCCAT Gene GeneID:517432|IGSF9B:XM_002707798:45_cdna Constitutive 0 NULL GeneID:517432 29 GENE IGSF9B NULL immunoglobulin superfamily, member 9B EMBV3_40616 AGCAACTAGAACACAAGAGGGCCGTGGAAAAACTTATAGAAGAGCGCCGCAACCAGTTCC Gene GeneID:532884|MNS1:NM_001046338:91_cdna Constitutive 1 NULL GeneID:532884 10 GENE MNS1 MGC137382 meiosis-specific nuclear structural 1 EMBV3_02140 CTATAGAATACAAAGCACCCTAGGCATCTCTGAACCGGTGGATTTTCTGTTTTTCTTCCC Gene BVT0102_243920 + 0 NULL GK000022.2:3416303-3899284 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00853 TGCCTATCTGTAGGTCCAATGTCCTTTCCCACTCCTACTGCCTCCACCCAGACATGATGA Gene GeneID:507078|LOC507078:XM_002707692:429_cdna Constitutive 0 NULL GeneID:507078 15 GENE LOC507078 NULL similar to Olfactory receptor 51I2 (Olfactory receptor OR11-38) (Odorant receptor HOR5beta12) EMBV3_36693 GGGTTACTGTGAAGGTTAAATGAGATAGTGTGTAGAGTTCCTGCTGCATAGCAGGTGCTG Gene BVT0102_203159 - 1 EMBV3_25062 GK000002.2:132584711-132587723 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106908 1 XLOC_062932 NonCoding TCONS_00106908 XLOC_062932 NonCoding NonCoding - 2:132584787-132585984 - TSS78590 1197 2 TCONS_00106908_1 45 0.508771929824561 1 0 0 2.51608322316849e-05 0 0 7.0535862139397e-104 8.96506822073618e-06 0 0 0 0 0 0 0 0 0 0.00167692890310318 0 0 0.000149753389005717 0 4.81794856558552e-05 0 0.000246453425727899 0 0 2.23325143283654e-11 0 1.60488042072464e-05 0 4.52047716635438e-05 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 1e-76 291 90.91 0.173767752715121 0 noncoding 0 0 0 0 -0.0439493974649451 0.718303397459036 -0.0467599059067158 0.551010201555178 ACTGCAGCCTGCCTCCCCTTAGGCTGATCTCTGGGTTTCCTAAGCACCTTCTGCCCTGGCTTCTCCAGAACATGAGCTCCTTGGCCCAGGCAAGTAGCTTGGGGCAGGTACCACAGTAGTTAATACAAAATATGAAGGGGAGGACTGGAGGACTAACAGCACCTGCTATGCAGCAGGAACTCTACACACTATCTCATTTAACCTTCACAGTAACCCTGTGAGGGCTTCCCCGATAGCTCCGTTGGTAAAGAATCTGCCTGCAATGCAGGAGACCCCGGTTTGATTCCTGGGTCAGGAAGACCTGCTGGAGAAGGGATAGGCTACCCACTCCAGTATTCTTGGGCTTCCCTGGTGGCTCAGCTGGTAAAGAATCTGCCTGCAATGCGGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGATTGCACAAAGAACTCTATACACTATCTCATTTAACCTTCACAATAACCCTGTGGGGTTGGTATTATCCCCATTTCACAGATGCTCAGTGTGAAATGAGGCTCAGGACAGCACCAAAGCCTTTTCCCTCAGACTGGGCCCCTCCCACAGAGCAGGCCTGGGATACAATGGGCAAGGGGATGGGTCAGTCTTAGGCAACTGGGATGGCCTGGATTCATTTCTAGCGATGTTAGCACGCACGGTTCCAACACAGCCCCTGAGGGCATCAAGACCTGGGTCTTCTCTGGACCTCAGCCAGATGTGGCCCCTATTTCCCAAAACAAGGAGTCTGCTCTCCTGGGTCACAGATCCTTCAAGAATCTAACACCGGTTCACATTTATATGCTCTCTGCTGAAAAAGCTGCACTTATACTCAAAATTGCAGGGAGTTGCAGAGACCTGGAGTCTGCAGGCTGTTAAGAACCCCTGCTCCAGGCTTCCCTGGTGGCTCAGTGGTTAAGGATTGGACGGCCAATGTAGGGGACACCGGACAGATCCCTGGTCCAGGAAGATGCCACATGCCACAGAGCCACTAAGCCCATGAACCACAACTACTGAAGCCCGTGTGCCCAGAGCCCTGCTCTGCTACAGGAGTCACCACAGTAAGCCTGTGCATCGCAATGAAGAGGAGCCTCCACTCACCCCAACTAGAGAAAGCCCGTGTGCAGGTGCGAAGACCCAGCACAGCCAAAAGTAAACACAAACGTACATACATACACAAAAGAAGCCC TCONS_00104123 TCONS_00104124 TCONS_00104125 TCONS_00104126 TCONS_00104127 TCONS_00104128 TCONS_00104129 TCONS_00104130 TCONS_00104131 TCONS_00104132 TCONS_00104133 TCONS_00104134 TCONS_00104135 TCONS_00104136 r 3' 78 TCONS_00104123 TCONS_00104124 TCONS_00104125 TCONS_00104126 TCONS_00104127 TCONS_00104128 TCONS_00104129 TCONS_00104130 TCONS_00104131 TCONS_00104132 TCONS_00104133 TCONS_00104134 TCONS_00104135 TCONS_00104136 r 3' 1274 EMBV3_21325 ATGCCACTTCTGAGGAATGAACATGGTGTAACACTCTTGAATACTTGTGTGATGCCAAAC Gene GeneID:533936|KLHL2:NM_001102160:22_cdna UTR3_Alt 3 NULL GeneID:533936 17 GENE KLHL2 MGC155024 kelch-like 2, Mayven (Drosophila) EMBV3_38082 AAGCTCCTGACCTTGTGAAGAGTTCCTGACCTGTGTGTCTCATAGACTGAGTGGGTGTTG Gene BVT0102_149117 + 0 NULL GK000015.2:43825037-43882265 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16941 ACAGAAGTGGGGGTGGCTATGGTGGAGACAGAAGTGGGGGTGGCTACGGAGGAGACAGAA Gene GeneID:536067|TAF15:XM_002695648:92_cdna Constitutive 0 NULL GeneID:536067 19 GENE TAF15 NULL TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa EMBV3_33550 AGGAAGTCCTGGGGCTTTCCCCTGCCTCCTACGTGGTTTCTGTTTTGTAATTTAAGCTAT Gene GeneID:414921|CLDN4:NM_001014391:68_cdna Constitutive 0 NULL GeneID:414921 25 GENE CLDN4 MGC128914 claudin 4 EMBV3_03534 GACAGCAGCAACGCGGACGAATTGGAACTGAAATGCTCTTGCCGGCTGAAAGCCATGATT Gene GeneID:538107|ASXL3:XM_002697710:27_cdna Constitutive 0 NULL GeneID:538107 24 GENE ASXL3 NULL additional sex combs like 3 (Drosophila) EMBV3_06289 GGTGACTGTTCAGCAGTTTGCTATATGGCCATTGTTGGCCTTTAAACTGCACTAGTAACG Gene BVV0102_084906 + 0 NULL GK000005.2:44720975-44765460 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39692 CAGATCCCAGACTGTGTGCTACAGTACGAGGAGGAACGGCTGAAGGCCAGGAGAGAAAGT Gene GeneID:509463|ATCAY:NM_001082429:191_cdna Constitutive 0 NULL GeneID:509463 7 GENE ATCAY MGC148888 ataxia, cerebellar, Cayman type EMBV3_25151 TCCGGATGGTGTGTTATGATGATGGTCTCGGGTCAGGAAAGAGCTTACTGGCTCTGAAGA Gene GeneID:513531|ITGB1BP1:NM_001034448:117_cdna Constitutive 0 NULL GeneID:513531 11 GENE ITGB1BP1 MGC128548 integrin beta 1 binding protein 1 EMBV3_27572 CAAGGACAGTCGTGGAAACTTGGTCATCTGGATGTGAGGAGCAAGCCACAAACCAGCTTT Gene BVT0102_326214 + 0 NULL GK000017.2:40167774-40483942 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075257 1 XLOC_046529 NonCoding TCONS_00075257 XLOC_046529 NonCoding NonCoding - 17:40391203-40392537 - TSS56794 525 2 TCONS_00075257_1 96 0.23047619047619 2 0.607651912978245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000603693777688365 0 0 0 0 0 0 0.000104846212686175 0.000766384737926119 0 0 0 0 0 0 XR_226562.1 LOC101909188 PREDICTED: Bos taurus uncharacterized LOC101909188 (LOC101909188), 2e-20 104 80.51 0.217142857142857 0 noncoding 0 0 0 0 0.0738567914091512 0.485344354583137 0.0622967296980037 0.284041064387863 GAGCCTGCACAATGCTCTCTCATGCTTGGGTTCCCAACTCCAGAAGGCACAATACTCCTCTGCCGCTCAAGGACAGTCGTGGAAACTTGGTCATCTGGATGTGAGGAGCAAGCCACAAACCAGCTTTATTGTAGGCAGTCGAAGTCCTACTGTGATGCCTGGGCAAGGCGCTTTCTTCTGGGGCATGGAGAGCAAGCATGCAGACCATCCTGTCACTGTGGCTGCCTCTCAACACCCAGGATAACGGAGCATCATCACAGGAAAGTCATCACAGGCTTGCTCACCAGGAGAAGCCAAGAAGGAGGAAAATAATCTCCAATTCAATTCTGCCTTTCAAGTCTCACACATCTGACTCACATCCAGAATGCTGGCTGCATCGCTCTGGAGAAAATACACATTTCAGGGACTTCCCTGGAGATCCAGTGATTGAGACTCCATGCTTCCAATGCAGGGGGCTCAGATTCAATCCCTGGATGGGAAATTAAGAAACTGCATGCCACACATAAAAGTATTAATAAATAAAAT TCONS_00077044 TCONS_00077045 TCONS_00077046 TCONS_00077047 TCONS_00077048 TCONS_00077049 TCONS_00077050 TCONS_00077051 r 3' 91267 TCONS_00077044 TCONS_00077045 TCONS_00077046 TCONS_00077047 TCONS_00077048 TCONS_00077049 TCONS_00077050 TCONS_00077051 r 3' 92600 EMBV3_35945 AAAGTTACCTCCAGAAGGAGTGGGGGGTTGGTCAGTGGTGGGCAAGGCCTCAGGGTGTAT Gene BVV0102_405571 - 0 NULL GK000001.2:146867965-146989202 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35781 TCGAGCAGGGTGGTAAGGATGTCTTTGATGCGCCCCAGATCCAGTGTAGTAATGTGCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37081 ATGGAGACAGTGGTTCGAGGAATGCCCTTGGTGTATCCTCCTAAGCCGGAGCGACTCAAT Gene GeneID:540767|MGC134007:NM_001076240:52_cdna Constitutive 0 NULL GeneID:540767 8 GENE MGC134007 NULL testes development-related NYD-SP22 EMBV3_17898 CCCCATTCTTGAAGCAACTTGTGCCTCAAGGGAAGATAACATTGAAGAACAATGGTTTGT Gene BVV0102_101811 - 1 EMBV3_21867 GK000015.2:20526350-20567723 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063508 1 XLOC_038235 NonCoding TCONS_00063508 XLOC_038235 NonCoding NonCoding - 15:20531049-20532222 - TSS47251 1173 1 TCONS_00063508_2 67 1 0 0 0 0 0 8.41804584575202e-06 0 0 0 2.01794495939362e-05 4.20919678633618e-05 1.95156464313867e-06 0 0 0 0 0.000315227748743172 1.41537031235886e-05 2.13903888786661e-05 6.11332091243969e-06 0 1.55279953265586e-05 0.000113872141183259 0.000109494202624816 0.000385886438959771 0 0 0.000119880315808212 8.18855975709875e-06 0 0.000153765477553512 XM_002692971.2 ZC3H12C PREDICTED: Bos taurus zinc finger CCCH-type containing 12C (ZC3H12C), transcript variant X1, mRNA. 0.0 2116 100.00 0.999147485080989 NM_033390.1 ZC3H12C Homo sapiens zinc finger CCCH-type containing 12C (ZC3H12C), mRNA. 9e-167 590 72.22 0.978687127024723 0 noncoding 0 0 0 0 0.0146668034550016 0.922952210382184 -0.0277779607756785 0.552702278107204 AGTTTACATGCTGTAAACTTTATTCTGTAAAATTAAAAATTGTGACTAGTATAATTGTGAGTGCACTTGTTGTATTGTGAATCTCTTTATAAGAAACAAAATGTATACCTGCTTTCTCTATCCAAACCTCTAGTATAGATTTAAGACACCTTAGGACTGTCCTCAGTGAAATACTCTTAACAGGATCATGTATGGTTTTAAATTCATTGGAGTACACCACTGAGCGTGTTCATTCACAGCGCTTTGTAAATGATGTTAACATCATAAAATCACATCTGTTGGAATATTTTGAATATTGTCATCCACTTAAGTTGCTATAGTTTCTTTTAAGATTGGAATATAACTCTAGTTTTAACGGGTGTTTACGGTTTTAAATATTTGTGTTTTTTTTTTTTTCTTTAATGCCCTCTGTTAACCTGCTTTTTGCTTCTGTTACAATAACACTTTGTTATGTTGGGAGTGGCTTTTTCCCTAAAGCTCTTAGTCTTTCAGATTGAAAAACAGTTTAAGGTTTTGATCACTTGACAATTTGGCAGTAAAAAAAGAAATTCTGTGCGTGTTTCAGTTCAGTTTTATAGATAGTGTAAAATTTCATTTTTTAAACCATATACCGAATTTGCCAATTTTCTGTCTAGATATTTCAGATGAATAACAAATTGTTCATTTAAAGCTTTTGACCCCATTCTTGAAGCAACTTGTGCCTCAAGGGAAGATAACATTGAAGAACAATGGTTTGTTTTTATAAAGAATGTGTTTTAAATATGAAGACTTTCTTCATTTGGGGGAAATTATAAACATCTCATCTAATACAGAACACCCGTCAACGTGCACACTTCCACAAACATGCGGACATGGCATTGCCAGTGAACCCAGTTATGGACTTTATCTTTTCCTTCTAGGTTTTATCCTCCCAAATCAGAGTCGTTTGCTGAGAGTAGAAATTCCAATTTGATCCTTCAAACTTATAAGAAAACAAGGCGAAGAATATGTTTAGAATAACCATCTGATGAATTCATGTGATTCTGTTTATTCTATGTCTGTTCTGTGTGTTTGTGTAGTGGGATTTTTACAGCTCCAAAAAAGCAGTATTTTAGACCTACCGGAAATCCATATCAAAACAGCTATATGATTCTGCCTCTGAGAAAAAAAAATATATATATTAAAAAACTCAGT TCONS_00058455 TCONS_00058456 TCONS_00058457 TCONS_00058458 . 3' 1501 TCONS_00058455 TCONS_00058456 TCONS_00058457 TCONS_00058458 . 3' 2673 EMBV3_18497 GACTCCTAGGATGTAGGAGATGCATATGATTTCTTTCTAAAACACCCAGTTATCTGCAGG Gene GeneID:506911|RAB19:NM_001035040:592_cdna Constitutive 1 NULL GeneID:506911 4 GENE RAB19 MGC128355 RAB19, member RAS oncogene family EMBV3_25261 CCTTGCTATTCGCTGGAACTCTGAATTCAGTCGGGTGTATCTGTCCCTTTCTCCCTTGTT Gene BVT0101_052694 - 1 EMBV3_38096 GK000009.2:30140794-30195128 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23203 CACTTTCTCAACACTTTTTCTGAGGTACCTACCTTCGAATCAGCCTGTTCGGGCGCCACT Gene BVV0102_217874 + 1 EMBV3_04438 GK000001.2:143000908-143048267 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011558 1 XLOC_007109 Coding TCONS_00011558 XLOC_007109 Coding Coding - 1:143007882-143010714 - TSS8635 2832 2 TCONS_00011558_5 62 0.465395480225989 1 0 8.02970445136846e-06 1.77408831378407e-06 5.4460879013507e-07 8.74637794505735e-06 2.29105740166784e-06 1.3753609301823e-06 2.65982130956768e-06 3.39386366798127e-06 2.49584232708124e-06 8.68362374248263e-05 7.02177588024836e-05 0.000161614256070168 4.60646559851866e-05 5.63774888038497e-05 3.13091900546755e-05 0.00458885724737939 0.00213800493862495 0.00485347193739789 8.22935683322184e-07 2.92538322013361e-06 2.1540819454267e-06 0.00134092072886986 0.00224531031859306 0.00341813137607319 2.44650435147268e-06 1.03602028146739e-05 6.75933779858738e-06 0.000412022530556674 0.000398432529215012 0.00057271518189259 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-173 614 95.60 0.13524011299435 TCONS_00011558_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 2e-09 54.3 60.00 0.709677419354839 1 noncoding 0 0 1 1 -0.595416926795943 0.174418025970049 -0.0383345061947562 0.593236167095668 GCGGGGAGCGAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTCTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAATTGGTTTAAATAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAATTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTTAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAACTTTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTACTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGTGGGCCTTGTTCACCGAAACTTGGTCTCACCATGTCGTTCTTTCTCTTACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCTTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAGTTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATACCCTGATCAGCCGGGGCTGGTCCCCGGCAAGTGGCGCCCAAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTTGAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTGAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGTGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTTTATTGAAAGTGTCAAAGGGGTTTGAGAGTAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAAGCTAAAAGCTTTATCTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAACACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCGTCATGAGGCTGTGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACGAAGAAAAGGAGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGTCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAACATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAATAAATAAATAAATAAAAAGAGAAAAAAATAAAAATAAAAGTAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGGGAGAAAAAAGAAAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAGAGAAGGGTAGCGAAAAAGGAAGGGGGAGAGAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGAGAGACTGTAAGAGAGGCTGTGACCAGGTGCCCTGGCGAGCTCCCTCCCTCTCTGCGCAAACCTTAAAAAAAAAAAAAAGAAAAGAAAAGAAAAACGTATCCACCACTTTCTGATTTAAGGCGATCGCCGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGAGCGCGCTCTTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACCGGTAAGGGGATTTAGCAACAATTTTAACCCCTGACTTGTGGTTGCTCCCATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGT TCONS_00002401 TCONS_00002402 TCONS_00002403 TCONS_00002405 . 3' 27200 TCONS_00002401 TCONS_00002402 TCONS_00002403 TCONS_00002405 . 3' 30031 EMBV3_01643 CATATGCATCAGCATCTCCTGGATCCTGCCCCTTACTTACAGTGGTGCCGTGTTCTACAC Gene GeneID:511136|LOC511136:XM_002690227:14_cdna Constitutive 0 NULL GeneID:511136 9 GENE LOC511136 NULL similar to trace amine associated receptor 6 EMBV3_18694 GAGTTGCTCTTATTTTCAGGTGGGGGACCATGAAAGGAGGTAGGAATGGAGATGTAGAAG Gene BVV0102_108336 + 0 NULL GK000005.2:23632137-23765499 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20004 CATCTATAAGTTTAACCAAGAGCACTGATGAAGTGCCTGTCCCCCCTCCTGTTCCTCCAC Gene GeneID:537682|SOS1:XM_002691241:215_cdna UTR3_Alt 2 NULL GeneID:537682 11 GENE SOS1 NULL son of sevenless homolog 1 (Drosophila) EMBV3_32299 CCGAGGAGCATTGCATGTTTGGACACTATTAGGACTTTCACCTGGCTTGAGAGCTACTGT Gene BVT0102_334539 - 1 EMBV3_28804 GK000013.2:6941887-6959810 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041815 TCONS_00041822 TCONS_00041823 TCONS_00041816 1 XLOC_025547 Coding TCONS_00041823 XLOC_025547 Coding Coding SPTLC3 13:6847255-6946202 j TSS31274 5408 1 TCONS_00041823_1 241 0.114090236686391 6 0.945404564105674 0.000129252168076302 5.30787147268328e-05 6.34858349624434e-06 4.48016019711735e-06 1.05747603268344e-10 7.63742997765796e-06 2.11813928458758e-05 2.87133297446457e-12 1.34753253844934e-05 1.99365362826564e-11 6.46558087306668e-05 4.13403645292558e-05 1.05529243622154e-09 0.000151119398324285 2.8802130276936e-12 0.000724837099304056 0.000375762974306561 0.000793066903678393 4.73008040573324e-12 8.46061210700525e-06 0.000184680818726189 0.000490160328282415 0.000501191729233601 0.000127941564550301 2.30849699985765e-09 3.89548189893397e-06 3.51736508822614e-11 0.000189741456573113 0.000244931244557437 8.03654987404821e-05 XM_002692040.2 SPTLC3 PREDICTED: Bos taurus serine palmitoyltransferase, long chain base subunit 2 (SPTLC3), mRNA. 0.0 1559 100.00 0.159578402366864 NM_018327.2 SPTLC3 Homo sapiens serine palmitoyltransferase, long chain base subunit 3 (SPTLC3), mRNA. 0.0 1783 75.89 0.458764792899408 TCONS_00041823_1 sp|Q9NUV7|SPTC3_HUMAN SPTC3_HUMAN Serine palmitoyltransferase 3; 5e-153 442 86.31 0.995850622406639 1 coding 0 0 0 0 0.0604893842669278 0.560658003473358 0.0520392113982722 0.380521536339789 GAGCCTAAGGCCTTTCTCCTGTGCTTTAATGAACACTGTGATCTCTTAAGAGACTTCCCTGCATGGAAGGTTCCATCGTGCATCTGCCCGATATCGTGGCTCTGAAGAAGAAATACAAGGCTTATCTCTACATGGATGAAGCTCACAGTATTGGGTCCGTGGGCCCCACCGGCCGGGGTGTGGTGGAGTTCTTTGGACTAGACCCCAGAGATATTGATGTATATATGGGCACATTCACCAAAAGCTTTGGAGCCGCAGGAGGTTACATAGCTGGAAGGAAGGACCTTGTGGATTATTTACGGACTCACTCCCATAGCGCTGCTTATGGCACATCCATGAGCCCCCCGGTAGCAGAGCAAATCATCAGAGTAATGAAACTCATCATGGGACTAGATGGGACCACAGAAGGGCTGCAGAGAGTACAGCAACTGGCAAAAAATACAAGATACTTCAGACAGAGACTAAGCAAAATGGGATTCATTGTGTATGGCAACGAAGAGTCTCCTGTGGTCCCCCTGCTCCTTTACATGCCTGCGAAAGTAGCGGCTTTTGCAAGGCATCTACTAAACAGAAAAATCGGTGTGGTGGTCGTTGGATTTCCAGCTACGCCCCTTGCAGAAGCGCGGGCTCGGTTTTGTGTTTCAGCAGCACACACCCAGGAGATGCTGGACACGGTTTTGGAAGCCCTGGATGAGATGGGTGACCTCCTGAATCTGAAATACTCCCGGAACAGGAAGTCAGCACGCCCGGAACTCTATGATGAGATGAGCTTTGAACTTGAGGACTGAGTTTCCTGGACCTGAACGGACCCTAAAGACTTGGCCAGGAAGACCTCCTTCTTTGTCTCAAAAGGAATATAAACGGATTTCTCCTCCTTTCTAAGGACAGTTTTGGTTTCCAAAACAATTTCATTGAACCAAGGGAGAAACAATCGTTGTTGTGTTTTTAATGTCTCTATAGAGACATTAACGTTCTCCTCCCCCAAGCATCCTGCCACAAACACACACATACCACACACACATTTCTTAGAATATTTGTAATGGCAAAGAGCCTGCGTTTTAGCTGCTACTGTGCAGCCTCTTCGGTCCAGGCCCTTTTAGGAATTCCAGCCAAATGAGAGGGTTTTGATTTTTACTTCAGTAGATCTCACTACGTGTTTGCTAATTTTCTCTGCAGAGCGGGGCAAGGGAGGTGGGCAGTAGCTGGGCTCCTTCTTACCCATGAAAGAACCAGCTAGAACTCATCCGTGTCATGGGAAGTTCCAGGTGGGAGGGTAAAGAAATGTTGCCTCTACCACTTGTCACATTTGGACTTTTTCAAGGACAAGTGTCAGAAGCCATATTGAGTGTTTGAAGGGAGAGCGCAGACCTGGCCAGCAAGACCAAAGACGTCTTTACAGGAAACTTTCCTTTTCCTGTTCCTGGTTTCCTACAGTTTTATAGCTGAGCTTTTGAGGTTTGGAAAATTCAAGACTTTTGTTTCATCAGGAAGAGGGAAGAAAGCAAGCAAGCCAACTGTAGGCCTAGACTAAACTGATAAAGGTGTGACGGTGTGAGCGTCCTTGTTGCCTTGTGGACTGAATGTTTCGCATCGCTTTTACTACACTGAGAAACGAGCTGTCCTTTTCCTACTGAGTGTGGAGTCCTTTAGAGCTGACTCCTAAGACTACACTTGAGAACGGATCGGTTAAAAAGTGACATTTAAAAGTAAATGCTATTCAGCTTTTCAATTCTGACCCCTCCATTCAGACCTATTAAACAGTACTGTCCTCTGGCATAAGCACTCCACTTTGGTGCTAAGTGGGCTTTACTTGAGTTGCCTCTGTCTCTCTGTCTCTATACATCTGCCTGTCTGTCTGTCTCTCCCTCTCTAAATGTGAACACACACTTCTCTGCAAAAGTAGCCCTTTGCTAATTGAATCTAGTCGGTATGGAAAAAAAGCCAGTAGAAAACCTTATCTTTAACAAGCCCCCAGATGGTGCCCAGATTGGGAAACTCTTAAAAAGCAGTGGTGACCTTTTACCAAAGCTTCTGTAATAGTTCAAATGAGTTACAGAACATTCCACTCCATCAAATGACACTCTAAACAAATCACTTCAAGAGAGGTTTGACTTCACGTGACACAGACGGACGCGGCTCTCATGCTGCGTGCTGGAGCAGAAACCCACCCACGCCCCCCGTGTTCTGGGGGCCCGGATGCTCACAGCTTTTTAAAGGATAAAGGCGATCAGTGTGGAAAGCGTTTTATGGAGGAAACTATTACCCTAATAGGTACATCAGCTAAAAACTGGATCCCATGATAAAGTTCCCCCTGAATTTTTGTAAGGAGTCCTATAAGCAGAAGGGGACAGGAAGTGGGTCCTGAAAATGCAGTTGCTCCATCCAATGGCTGATTTTGATAACTCAATTCCAACAGAGACTAAATTTCAACTCAGTGAACCAGTGCAGCATTCCTTGTGCAAAGAAAATATATACTGTATACATATGCCAAGAAAAGGAAGGCGCAGAGGTCTTTTCTCTTGAAAATGTATGTTTAAATGAAGTTGATCTTAGTTAATTGTCCAAAATGAATCTTCATCAAGATGCCAGAGTGCTGAGTCATTGATTACATTCTCCAACATGAGATCAAGAACCTAGCTCTGTCAGACCGTCTGTGCTGAATATGAACTTATGAGAACAACTGTAATCCAAATGGAATGTTTCCTGAGCACATTAGAGGGGTTCAGGTCCCAGAGGGTTAATGATATAAGGATATATGTCTTATAGAGTGAGACTGGTTAAGAGGGTACTTGTGAGAATTTTTCATTTTTATAAGAAAAAATCTACTGCTAAGTCAATTCAATAGGTATTATTGGGCCTTTATAGCTATACCAGAGCCAAAAATGTCCCTTTGGTTGGCTCTGTTTGGAAAGATAATTTCCTAAAAGAACTGTAATGGCTTACACCCCCAACCCTCCCAACTGTGAAGAATGCGTGTGTGCATGCACACACATACAAGCACATTTGCCCCTTTCTTTACAGAGCAAGAGTTTAAAGACTCAGAGATGAGAATCTGGCTGACTAATAAATAGATGAAAGATGCTATTTCTAAAAATGACCTTCAGGGAAGCAGAAGAGGAAGGATCCAGACTGATATTTGTAAGGAGGGTGTATTTGCATAATAGCAAAATGGCATAGACACCTTCCAAATCTTACTGAATGCAGTATCCTGTTGTTGACTATCTTGCCTTTTAGCAGGCTTTGGTTTGACAGAGACTATGGGCTTCAGAATGTACTAGTAAGCTTATTAAAATAAAGATCCCTGGGCCCCAAACCAGACTTCCACTGAATCCAAATAGCTCCAGTGCCCAGGAATCTTGCTTTTCAGCCTGTCTTCCCAAGGGGATTGTCAACCAGGTCATAATTTGAGAACCAGGGCTTCCCTGGTGGCTCAGCTGATAAAGAATCCACCTGCAATGTGGGAGACCTGGGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAGAAGAGAAAGGCTACCCACTCCAGTATTCTGGCCAGGAGAATTCCATTGACTATATAGTCCATGGGGTCACAAAGAGTTGGACACGACTGAGCGACTTTCACTTTCATTTGGACTGGTAACTCTAGTAACTTTCCCAGGAACTTTGTTCTGATTCTCTGTTGGTGATTAAGAGTGTTTATATTGTTAAAGTAAATTAATTATTCTAAACTTTTCACCCCAATGCAACATTTTGTTCCCATTTCAAGGTACCTTCTCTTTCCCCAAAAATGAACCCGGTGTTGAAGAATAACCTGCCATTCATTTGAACAGAAGTATCTCTTCTCTAGCTCTCCTTCATCTCCTTTGTGTCATTTCTTACAAGATGTTCCTTTTTCTTTTCATGACTTTGTTCCACCAATTGTGGTATCTTGTTTCCTTTTTTTCTTCCCACCCCCTGAAAAAAATCTTCGACTTCTGATTATTTATTTATTCCAACAGTAGCTCTCAAGCCAGGTGAAAGTCTTAATAGTGTCCAAACATGCAATGCTCCTCGGTGTTTGTCTTCAGAGATAACAAATATTATAAATGAGTTACTCTGACCGAGGAAACCTTGGCTCTCTTAAATATAGGATTTGATTTATGGCAACAATAACAATTGTAATTTGAACTTATCATACTTCCTTGGCAGTTTTTTCCCAGTTTCACTAAGAACAATATATTCGAAGTCTTTTTTCTCAGGATGCTATATGGAGCTGTATAATATTTAAGAAATTAAAAGGAGACTGTATTTTAAATGTTTCTAGGTATTTATCGTGGGACATTGTCTTAGGGTGTTGTGGTGTGGTGTTTTGTATGTGTGTATGTATGTGTGTGTTTCACTGAAACATTTGAGGTGACCAACTTCATTATATTCTCCCTGTGATACATTAATTTCTTTAATAAACCAATCACCCAAATTGGCAATATAAAAATGAGTTGATGTTTTTGTGTTGACTTAGTTTGGGTGACCCACTCTAGTGTTCTTGCCTGGAGAATCCCAGGGACAGAGGAGCCTAGTAGGCTGCCATCTATGGGGTCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCCCTAAAAAAAAAAAAGACTAAGATTTGCTTTTAAGAATTTCATTGAGAAAAAATGGCCCAGGGTGGCGAGCCATGACTTGCACTATGTCACCAGAACCAATGGTGCCCATCTCTTCCCAACTCTGTTTTCAGTGACATCACCTTTATAGCTGGAAATTGGCCTTGTTGGGAGTATTTACATCACAGAAACTGGCAAACACTACAGATTCGTGGTCTGGAGAGCTGGCTGTTAAATGTTGATCAGGCACACCACTGAGACTGCATACAGTGTTACAATATCTAGGTTGGAGGGAGGGAACAGGCTTGGAAACAGAAGTTGCAGTGTGATGTCATCATAACAAAGGCTTCAGTAAGCCCCAGAGAAGCTATACAACTGAGATGGGCCTTTAGAAGTAGCTCAAAAGAAGGCGAGGGTGCCAGGTCTGTCCCCCTACATACTAGTTAAAGGATGCAGGCTACCAGGGCATCCCTGGGGGAGAGTGGTAACTTAGACAAGACAATTCCTTTCAGTCAAGGGAAATTCTTGGGGAAGGACTCAGCTTTGAGCTGATAGCCATCCATCCACTTAAAACTTTTACTTCTAAAATGCATAATTAAATACTACTGAGTCTCTGAAGAGAAAAATAAATATTGTATATATTTTTAATTTATGTATGTAGTTTATTTTGTTATACATACCTATATATAATAAATATGTTTATTTTTAAAAACTATATTTATTTATGTTATTCTCTTTAATGACTATTACAAAGAAATTAATGAATACAGTTTAACATTACTTTAAAGATGTTGACTTCCTGGATTGTTTG EMBV3_40621 ATGAATGCCACATTAAACATCCACCTGCAGGATAAGATGAACAACTTTTCCATTGAGAAG Variant GeneID:768017|MGC137061:NM_001077076:23_cdna 293^418 1 EMBV3_04003 GeneID:768017 15 GENE MGC137061 NULL hypothetical protein MGC137061 EMBV3_12438 AGAGTACATACTGGGGAGAAGCCCTATAAGTGTGGTGCCTGTGAGAAATGCTTTGGCCAG Gene GeneID:783152|ZNF322A:NM_001098155:173_cdna Constitutive 0 NULL GeneID:783152 23 GENE ZNF322A MGC157324 zinc finger protein 322A EMBV3_37876 TGTCCATAACTGTGAAGTAGCAAAGCACTTAGGGCCAGATGCACTGAAAACACTGCAGGT Gene GeneID:541150|RSBN1L:XM_002686750:27_cdna Constitutive 0 NULL GeneID:541150 4 GENE RSBN1L NULL round spermatid basic protein 1-like EMBV3_38850 GGTGACCTGGCTGGTCCCAGAGGCCCCAGCGCTGCTTTTGGGGGCTCAGTGTCTACATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29810 GGACATGAGGATGAAGAAAATTCCTTGACTGGTCACCTTTCAATGGATCCAAATGGACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21362 CCAGCAGGAAACTAGGCTGTCTGGCAAAGCCCACTGTGACCATCATGACAAAGGAAGATC Gene GeneID:100300024|LOC100300024:XM_002692715:143_cdna Constitutive 0 NULL GeneID:100300024 14 GENE LOC100300024 NULL similar to peripheral myelin protein 2 EMBV3_11008 CTGGAACCCTAACAGTTGTAATGGACGAGGAAGGCAGGCTCTGTTGTCTTCACAAACCAG Gene GeneID:532080|EXOSC8:NM_001079606:136_cdna Constitutive 1 NULL GeneID:532080 12 GENE EXOSC8 NULL exosome component 8 EMBV3_13963 GAACCAGCTTGTCCATTTCTGCCCCCCAAAAAAGGCAGTTAGAATTATGATAGTGATCGC Gene GeneID:526597|LOC526597:NM_001079777:105_cdna Constitutive 0 NULL GeneID:526597 19 GENE LOC526597 NULL hypothetical protein LOC526597 EMBV3_13362 CGGTGCCTTAAGAAAGCTGGTCTGACTTGGTCTTAGTTTCCTGGTCCTGCGGGAACTTGA Gene BVV0102_315086 + 1 EMBV3_22019 GK000012.2:81161578-81261654 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10852 AGTGGCCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGA Gene GeneID:617325|KSR2:XM_002694506:399_cdna Constitutive 0 NULL GeneID:617325 17 GENE KSR2 NULL kinase suppressor of ras 2 EMBV3_22009 TGGTTCCTTGGTAGCCTAGATAGCAGAAAAAATACTGGGATTTATCATTGGAAGCCTGGG Gene BVV0102_014971 + 0 NULL GK000003.2:43085414-43137017 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31489 TCTGCCTAAGCCAACTCGAAAAAGCCGTACGAAAAATAAGGAGATACGTGCCAGCAGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13859 TGGAGAAAGTGGAGGAGAATCAGACGTTGAATCCTCAGGGAGAGGCTAACAAGACAGATT Gene GeneID:100139208|LOC100139208:NM_001130765:8_cdna Constitutive 0 NULL GeneID:100139208 2 GENE LOC100139208 NULL hypothetical protein LOC100139208 EMBV3_26334 CGAGTACAGAGAAAATAAACATTTAGTCACTGCCTCCGGGAAAGCCAGTCCCACAGCCTC Gene GeneID:508105|TNFAIP3:XM_002690273:17_cdna Constitutive 0 NULL GeneID:508105 9 GENE TNFAIP3 NULL tumor necrosis factor, alpha-induced protein 3 EMBV3_23146 TTTTGGTTTCTCTTCATTGTGGTTGAGGAAGGGGAGCACAGGGACCTAGGATCTGGTACC Gene GeneID:509283|RNF213:XM_002696144:302_cdna UTR3_Alt 2 NULL GeneID:509283 19 GENE RNF213 NULL similar to mCG142721 EMBV3_43585 GACCAGGACTTGGACATCAACGAGTCTCCCCAGAGCAACATGACAAAGGCAGTAGATGCA Gene GeneID:518635|MFSD11:NM_001075777:413_cdna Constitutive 0 NULL GeneID:518635 19 GENE MFSD11 MGC151946 major facilitator superfamily domain containing 11 EMBV3_01890 CCAGTGAGTGACCCAGGCACCTCATGAACAGCTCAGACACTGAAGTTTTTGCTTGTGTAC Gene GeneID:512995|ACO1:NM_001075591:49_cdna Constitutive 0 NULL GeneID:512995 8 GENE ACO1 MGC140553 aconitase 1, soluble EMBV3_15918 AATGTAGAACAGTTCCCTGTTTTTGCGTTTTATGACTTGGGCTTGTGTGACAAGGACAGG Gene GeneID:540840|DTWD1:NM_001098120:113_cdna Constitutive 0 NULL GeneID:540840 10 GENE DTWD1 MGC148444 DTW domain containing 1 EMBV3_38472 GTTAAATGAAACTTCAAACAACAGTCTGATCTAGGAGGCTACCCTTGGTTACCCCCAGGG Gene GeneID:614455|RETSAT:XM_002691367:224_cdna UTR3_Alt 2 NULL GeneID:614455 11 GENE RETSAT MGC159377 retinol saturase (all-trans-retinol 13,14-reductase) EMBV3_16639 CCCCCAGAATCTTCATTCTCTTAGTGGGGGCTTCCTATCTAGGTGGGTGTGTGAATGCTT Gene GeneID:782978|LOC782978:XM_002693112:516_cdna Constitutive 0 NULL GeneID:782978 15 GENE LOC782978 NULL similar to Olfactory receptor 5P3 (Olfactory receptor-like protein JCG1) EMBV3_24566 CTGCACCTGCCACAACAACATCTCACAACCCTCTGGCAAATATCCTCTCGAAGGTGGAGA Gene GeneID:614766|RPRD2:XM_002686048:259_cdna UTR3_Alt 3 NULL GeneID:614766 3 GENE RPRD2 NULL Regulation of nuclear pre-mRNA domain containing 2 EMBV3_14327 TCAGCAGCATTTCTGTGGTCCCAACCTCATCCGCAGTTTTGCCTGTGAGTTTCCTCCAGT Gene GeneID:617415|LOC617415:XM_002687326:147_cdna Constitutive 0 NULL GeneID:617415 5 GENE LOC617415 NULL similar to hCG2044647 EMBV3_20419 CCCGTACGCCTCTTCAGGGGCCGGACAATGGTATGCAGAGATGCCCAAGGCTGAGAAGAA Variant GeneID:613653|ITPA:NM_001076282:1270_cdna 426^502 5 EMBV3_32621 GeneID:613653 13 GENE ITPA MGC137583 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) EMBV3_32644 CGCAAGATAATGTGCCAGCTTCTTTCTAGACGATTTCAAGGGGAAGCGAGCAGGAGTGAA Gene GeneID:100139092|LOC100139092:XR_084149:129_cdna Constitutive 0 NULL GeneID:100139092 X PSEUDO LOC100139092 NULL similar to Probable G-protein coupled receptor 34 EMBV3_24268 CGTCGTAGACTTTGTGCGGTTTGAGTGTGGAGAAGGTGAAGACGCAGCAGACGCCGAATA Gene GeneID:281551|TSFM:NM_174204:905_cdna Constitutive 1 NULL GeneID:281551 5 GENE TSFM NULL Ts translation elongation factor, mitochondrial EMBV3_32076 GCAGGAGAAACTGTGGAAGAGAGACGTAGGCTGCTCCAAAATAAGCGAAAAGAGCCGGTG Gene GeneID:539613|TRMT1:XM_002688756:120_cdna Constitutive 1 NULL GeneID:539613 7 GENE TRMT1 NULL TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae) EMBV3_17890 GGAAAACCAGTTCCCTAACCTCAAAACTATTTTGGTTCCTGACAACCAAAGGCTTTCAGA Gene GeneID:504813|NPY1R:NM_001045898:40_cdna Constitutive 2 NULL GeneID:504813 6 GENE NPY1R MGC137850 neuropeptide Y receptor Y1 EMBV3_06936 CTCTGACCAGGGAAGATCCTGCGTGCCGGAGAGAAACTAAGCCCATATGCCACAACTATT Gene BVV0102_057049 + 0 NULL GK000003.2:14917341-14926782 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168594 TCONS_00168597 1 XLOC_103142 Coding TCONS_00168597 XLOC_103142 Coding Coding RIT1 3:14908140-14921542 j TSS126412 884 1 TCONS_00168597_2 155 0.3789592760181 6 0.934482501305873 9.70449029324498e-05 0.000660749981960175 0.000378301085945877 0.000628821906193816 0.00124436237670372 0.000319224311804559 0.000310443899093115 0.000158631383417362 0.000274803992553834 0.000867397843405385 1.65402264454691e-05 5.55057797671584e-05 5.58364914914409e-05 0.000291734387249658 3.40361835916462e-05 0.00549951992876601 0.00138734221400634 0.00233411759331914 0.000902094613976177 9.9647229145277e-05 0.000149924448744055 0.00036561660733475 1.76533828678826e-05 0.00105555526671377 0.000426951814340447 0.00198307689396201 0.000333337772034827 4.01235898996935e-05 5.0074225390717e-05 1.66387710271346e-102 NM_001098078.1 RIT1 Bos taurus Ras-like without CAAX 1 (RIT1), mRNA. 0.0 944 100.00 0.590497737556561 NM_006912.5 RIT1 Homo sapiens Ras-like without CAAX 1 (RIT1), transcript variant 2, 0.0 688 92.41 0.530542986425339 TCONS_00168597_2 sp|Q92963|RIT1_HUMAN RIT1_HUMAN GTP-binding protein Rit1; 6e-101 293 96.60 0.935483870967742 3 coding 0 0 0 0 -0.507304259179681 0.116899210147805 -0.0033557359907391 0.948282210121983 GTGAGGAGGACGAAGTAGGTGATCAGACCGGCCGAGACCTTCAAGTTCCGACCGGTGCCTTTTCCTCGGGGTAGCCCGGGATTCTCCAAGAGGACAATGGATTCTGGGACTCGCCCAATTGGTAGCTGTAGCAGCCCTGCAGGGCTGTCTCGGGAATATAAACTAGTGATGCTGGGTGCTGGTGGTGTAGGGAAAAGTGCCATGACCATGCAGTTCATCAGCCACCGATTTCCAGAAGATCATGATCCTACCATTGAAGATGCTTATAAAATCCGGATCCGTATTGATGATGAGCCTGCCAATCTGGACATTTTGGATACAGCTGGACAGGCAGAGTTTACAGCCATGCGGGATCAGTATATGAGGGCAGGAGAAGGGTTTATCATCTGTTACTCCATTACCGATCGTCGAAGTTTCCATGAAGTTCGGGAGTTTAAACAGCTTATTTATCGAGTTCGACGTACTGATGATACTCCTGTGGTTCTTGTGGGAAACAAGTCTGACCTAAAGCAGCTAAGACAGGGTCAGAAACAATGGAGGGCTTCCCTGGTGGCTCCGTGGTAAAGAACCCGTCTGCCAATGCAGGAGATTCGCGTTCAATCTCTGACCTGGGAAGATCCTGCATGCCGGAGAGAAACTAAGCCCATATGCCACAACTATTGAGCCTGTACTCTAGAGCCCGGGAACTGCAACTACTGAGCCCACGTGCTGCAACTGCTGAAGCCCATGCAGCCTAGAGCCTGTGCTCAGCAAAAAGAGATGCCAACACAATGAGAAGGCCGAGCTCCAAAACTAGAAAGTAGCCCCTACTCCTTGCAACTAGAGAAAAGCCTGCACAGCAGTGAAGACTCAGCACAGCCAAAAAATAAATAAAAGTATTTTAA EMBV3_39883 GCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCAGTAATTGGTGATG Gene GeneID:531418|CLASP2:XM_002696923:457_cdna UTR3_Alt 2 NULL GeneID:531418 22 GENE CLASP2 NULL cytoplasmic linker associated protein 2 EMBV3_37861 ACTGTGGTTAAGGGACAGAAGATTACATACAGAAGTATTTGGGGAGGGGGTGCTTTCTCC Gene GeneID:528655|PDK1:XM_002685323:183_cdna UTR3_Alt 3 NULL GeneID:528655 2 GENE PDK1 NULL pyruvate dehydrogenase kinase, isozyme 1 EMBV3_26572 GGAAACACTTTGAAAAGCTGGAAAGAGTGGATGGGCCAAAGCAGTGTCTTCTCATGCGCT Gene GeneID:506754|RRAGB:NM_001075279:109_cdna Constitutive 1 NULL GeneID:506754 X GENE RRAGB MGC139815 Ras-related GTP binding B EMBV3_12906 TCCGGAGGATCTGTGCTTCTCTCTGCAGGAAACTGTGTTTGCAATGCTGGTCGAGATCAC Gene GeneID:507512|OSGEP:NM_001075319:37_cdna Constitutive 1 NULL GeneID:507512 10 GENE OSGEP MGC142422 O-sialoglycoprotein endopeptidase EMBV3_19712 TCTGTTGTCATAGCCACATTTATTTCTGTCTGCTGGTGATCATGTCTTCCTCCTGCCAGC Gene BVT0102_157752 + 0 NULL GK000015.2:20808028-20907086 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058462 TCONS_00058464 TCONS_00058461 1 XLOC_036103 Coding TCONS_00058462 XLOC_036103 Coding Coding FDX1 15:20772594-20810639 j TSS44030 4172 1 TCONS_00058462_2 186 0.0941994247363375 4 0.890442645358007 0.00191148692748934 0.000994093436730917 0.000899572127453549 0.000732862569422626 0.000639558102394266 0.00034774704154115 0.000313357641994399 0.000472404972116858 0.000504559941271319 0.000169993026863791 1.22038063235922e-05 1.46855431336732e-05 0.000115495031547828 7.47264383915034e-05 9.93730436730945e-05 0.000678708535321512 0.000370781387109176 0.00045562811629936 0.000296142406842654 0.000538894742202559 0.000350347123246042 0.000282278503727451 0.000188094486403119 0.000902143615628708 0.000708752447783157 0.00056778940578167 0.000485677416648871 3.46226583268212e-05 1.85372087711833e-05 1.93298399603948e-05 NM_181011.2 FDX1 Bos taurus ferredoxin 1 (FDX1), mRNA. 0.0 2031 98.24 0.285714285714286 NM_004109.4 FDX1 Homo sapiens ferredoxin 1 (FDX1), mRNA. 0.0 915 79.43 0.241131351869607 TCONS_00058462_2 sp|P00257|ADX_BOVIN ADX_BOVIN Adrenodoxin, mitochondrial; 2e-133 376 100.00 0.994623655913978 1 coding 0 0 0 0 -0.320212335815891 0.194766712977271 -1.04689991202891 0.00201497283595341 CCGGAAGGCGCTCGGGGCCCCCGGTGGCGAACGCATCAGGCCCTCGAGGGAACCCCGGCCCTGAGAGTCCGCTGCGCCTCTCTTCTCTCCGCAGACCCGCGCGGCGTCAGCCCGCCCGTACTCGCTGAGTCTGCCCTCGCGGCCGCTGCCGTGCGGCCTGCGTCGCCTTCCGTAGTTCCCCGACAGGCTATGGCCGCCCGCCTCCTGCGCGTCGCCTCCGCCGCCCTCGGCGACACGGCCGGCCGGTGGCGGCTTCTCGCGCGACCGCGCGCGGGAGCCGGCGGCCTCCGTGGGAGCCGAGGACCGGGCCTGGGCGGCGGCGCAGTGGCGACGCGGACGCTGAGCGTATCGGGGCGAGCGCAGAGCAGCTCAGAAGATAAAATAACAGTCCACTTTATAAACCGTGATGGTGAAACATTAACAACCAAAGGAAAAATTGGTGACTCTCTGCTAGATGTTGTGGTTCAAAATAATCTAGATATTGATGGTTTTGGTGCATGTGAGGGAACCTTGGCTTGTTCTACCTGTCACCTCATCTTTGAACAGCACATATTTGAGAAATTGGAAGCAATCACTGATGAGGAGAATGACATGCTTGATCTGGCATATGGACTAACAGATAGATCGCGGTTGGGCTGCCAGATCTGTTTGACAAAGGCTATGGACAATATGACTGTTCGAGTACCTGATGCCGTGTCTGATGCCAGAGAGTCCATTGATATGGGCATGAACTCCTCAAAGATAGAATAAATAGGAATATTTTCACAACATTTTACCCTATTTTTATAATTATTATTTCTTAATGTAATTAAATGAGAACATGGATGAATGGATTTATCATTATGACTAGATTTACTAAATTCATCTGATACAACTGCTGAATTTTGTAGTTCTGAAAGTATGCCATTTTTATTTTGATTAAATTATAAAAACAAATATTAGAAAGTAGTTAGTATGAAAAACCTTATATATTTTACCTGTGATTGATCAGCAACATAAATCTTACGCCTACCTACCTATAAGTAAGTAGGTTAAAAAAGGGTGTCATTATCTCTCTTGGATGTGGGTGGAGGCAGAGATGTAAGGTGGCTTGTCTAGGGTCATACTGCTAATTAGAAGGTCAGTACTAGAACTGTACATGTTTAGGTCGAAACTGGGGAAATTAGGGATCTCATTTAAAATCTGAGCACAGATAATAAAGCACTGTCAAAGATGTTTGGTCTCAATTCTGACTGAGGTGGAGGAGTAAACTAAAAATTAAATGTGTTTTTTTTTTTTTAATCTTGATCAGAATGGTCTGTCTTTGTAATCTTTAAAAAGTAATGCTTATTTATAAATTTCTCCCTGTGACAGAATGGATATCTTACGGATTAGGTTTTCTCTGTCCTAAGAAGGGAACGAGGGGGCTACCATCCCCTCGGCCAGGACAGCCACGTGGTGTGCAGTGAGCATGCAGGCAGGGTCCTGGAGGACGGGGGGCTTGAGCCCTTCAGATCACCATCCATGCATGGCAGACATTTGTATTTTATCTTTATTGTGAATAAACTGATAAATGACAATAAAAGGGTATGAAGTATGCTCTTGAAAGTGTAATGAAACAGTAACTATTTTGGACTAATGGGGAAGGGCAGAAAAAAATTAGTGCAAAGTGAATTGTAAAGTTGAGTTAGCTTCAAGTATATCTGTGCCCTTTGAGCATTAGAAGCCAGGTGCTAGAATCATCTGAAGGCTTATGATTCCCTCATGTGACTGGCACGTTGATGCTGGTGTCCGCTGGGGATCTAGCAGGACCCTCATGTACGTACGGTCCCTTCGTGTAAGCCGGGTGTCCTTACAATGGGGTAGGTGGTTTCTGAGAGCCAGTGCCCTAAGGGGCGTATAAGCATTGCTAGGCAGAAGCTGAAAGTCATGGAGTATTGCTTTTGCTTGTTTGTTTCATTAGAAGTGAGACATCAAGTCTGACCCATCATTTGCATTGTGGGATTTCAGAGAATTTGCAGACAACATTTTTAAGCCATCACAGTAACCATTACTTTCAGATTAATTTACTAGCACTTCATTGCCTGTGAAGATTAGCCTTTTAATTAACAGTATTCTAAACTTTTTAAGAGGGCTAGGTTTTACTCTTGAATTGTGTTTCAAAAGATTCTTATGTCTCCTTTATTATGATGGTTCGTTTGTTTTATTCTGACTCCTCATAGTTTTCTTCTTGATGGTTTAAAGCCAGGAGAAGAAAGATAGGCTTCCTTGCAAAGCTGGGTAATTTTCAGTTTACATTTCTCTGTCACTTTGCCATCAAGAAATGCACCTTCCTTTGGCACAGTACTCTATAGAATTGTTGGTTACGTGCTAATACTAAATGTTGAATTTGGTTTTCACAGATAAAACCATCCTGTAATATGGAAATAATTCAGAACTGCTGAATTTAAGTGAACACTTCTAAGAATTTCCAAAACCTTTTGCTTAAGTTTCACTGTGAAAAATACTGTCAAACTTTTGTCTTAAAGGACAACTCTCCTCCTTTTTAAATAACTACTTCAGTATCACATGGTGGTCCATGTGGTTTTTGTGGTCATTAAGCAATAGAACAATTACATTTCACTTGGAAAAATGTTTTCTGAGGTAAATTTAGATTCAGTATATGTTTTCCTATTTCTTTTCTTCCTTTTTACAGCTCTTACAATTGCTTTTCCTTTATTTAAGCTACTTGAAATTTTGTGGTAAACCACATTTTGGGATCAGAATTTCTTTGATGACTTTCTTATTTGTAGGATAACATCACTATAAATTAAAAAAAAACCCAAAATAATTGTATGCATATTCCTAAAACCAGCCTGTGAAAATTTATTCTAAGTGTAAACCATTCATAGATACTCAGAAATTACATATAAACTTTGTTTCTTGTTGGAAAAGTTTTGAAGAATAGAAGCATGATCTTTGTGAAGCAGCAACAGGATTCCTTTAATATATCAACACATCACATGATATCAAGTTACTTTTATCAGATTTTCTTCTGTTTCAAAGTTGCTAGAAACTGAAAAACTAGACAGCCAGCTGGCAGGAGGAAGACATGATCACCAGCAGACAGAAATAAATGTGGCTATGACAACAGAAACAGGAAGTTAAAAGATAATTTAAATCTACTCAAAGCAACTTGAGAAGTTGATGGGAAAGATCTTTACAGTGAGAGGTGTTACTTCTGCAAAAACTGTTAGTAATAAATCACCTGATCAATGTCTTATTCTTCTCTCCTTTTGAATCCCATTTGCTTATCTTATTATCTGGATGTATTATTGGTCATTTAATTTTTAGACTTGATTTGATAATAATATAAAATTAAGAAAAGCCATTGTGCCTTTCTGGCTCCCTCTGTCCCTTTGTCTGCTGGTCACTTCTGGGGTAAGGACTACGTTGTGTTCAGCTTTGCAGTCTCTGTTGTGGTATTTAGCCTACAGTAGCTATACAGTGGGAAGCCCTGGTGGCTCAGTGGTAAAGAATCTGCCTGCAGTACAGAAGCTGCAGATTCAATCCCTGGGTTGGGAAGACCCCCTGGAGAAAGAAATGGCAACCCACTGTAGTATTTCTCTGTGGGAATTCCCATGCACAGAGGAGTCTGGCAGGCTACAGTCCATTGCGGTCGCAAAAGTGTCAGATGTGACTCAGAGACTAAACAACAAGGTATACAGTACATAGGTGAATTAGTCAAAACCTGGGCTTACAAGGAGCGTGCTTCTGGTGCTTTGCTCGTCAGCGGTCACCTGTTACTGATGGGATTACATGAGCCCAGTACAGGCCTTATAGTGTGCCTGCATCCTAACTCCAACTTAACGGGAGTCAGATACATAGGAGTATTTTCTTGAGAGGTTAGATAATCTCCATTATATTTAAAAGGATGGTGTTCAACTTTAAGATTTTTTTTTTTAATTGAAGTATAGTTCATATACCATATTATGTAAGTTACAGGTGTACAGTATAGTGATTCACAGTTTTTAAAGCATATAGTCATTTATAATTAAAATACTGGCTATATTCCCTGTGTTGTATCCTTGTAGCTTATATGTAACAGTTTGTACTGTTTAACTCCCTAGCCTTATATTGTCCCCTCCTTCCCTCCGCTGGTAACCACTTTTGTTTTTTTATATCTGTACATGTTTCTTTTTTGTTATATTCAC EMBV3_21110 GAAGGGTGAAGTTAGAGAGCTGAAAGCACAGAGCTGGTTTTCATTCTTCTGTTTACTCAC Gene GeneID:505212|HSD17B7:NM_001083375:230_cdna Constitutive 0 NULL GeneID:505212 3 GENE HSD17B7 MGC137785 hydroxysteroid (17-beta) dehydrogenase 7 EMBV3_38237 GGGGGCTGCTCAGCAAATCCCTTTATGAATACTCCAAGACCTTCATCGTGTCCCTTGTCC Gene GeneID:538021|DAGLB:NM_001083487:263_cdna UTR3_Alt 2 NULL GeneID:538021 25 GENE DAGLB MGC143054 diacylglycerol lipase, beta EMBV3_34264 CTTCCAGATGAAACTGTATGCCCATGGCTTCACCCCCGAGGAGCTGTTGGTTCAGGTGAA Gene GeneID:614199|HSPB9:NM_001040577:216_cdna Constitutive 0 NULL GeneID:614199 19 GENE HSPB9 MGC133624 heat shock protein, alpha-crystallin-related, B9 EMBV3_03996 GTTGCACATCTGGACATGAATGCAGACTGAAGTTGTTTCAAGTTTTTTAGCTGCCATGTG Gene BVT0102_124167 + 1 EMBV3_39147 GK000030.2:7827529-7830536 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34415 AAAGGGGGACGAGCCCTCCAAAGGCGGGTGTTGAGTTTCAGCTCAGGACCCTCGGGCTAA Gene BVT0102_091594 + 0 NULL GK000010.2:21386410-21395794 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34085 GCTTTAAACCAATTGCTGTGGAGCGGAAAGAGACTGAGAGCCGCATTTGTGCTACTTTCA Gene GeneID:783909|LOC783909:XM_002696497:67_cdna Constitutive 0 NULL GeneID:783909 21 GENE LOC783909 NULL similar to spindle and KT associated 2 EMBV3_19347 CCTTAGGACTCATGAGGGGAACGATCCACCGGTGCACGAAATTTAACCAGGAGATGTACA Gene GeneID:528661|CCDC105:NM_001046292:89_cdna Constitutive 0 NULL GeneID:528661 7 GENE CCDC105 MGC134550 coiled-coil domain containing 105 EMBV3_12591 TGCTGTATGCATTTGAAAATGCAGCACCAGAACAAAAGCTGTTTCTCCCCGCTTTTGGAG Gene GeneID:528994|LOC528994:XM_002691274:337_cdna Constitutive 0 NULL GeneID:528994 11 GENE LOC528994 NULL similar to transmembrane protein 166 EMBV3_03722 ACCCTGGAGATGTGGTTGCACAGCTTGAATGGAATTGCTCCAAAGCTGGAATTTTCTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16430 GGAACGAAAGATAAAAAGTGGAGAGGGGAGTGGCACGAACTGTTTCGGAAGCTAAGGGTC Gene GeneID:100336970|LOC100336970:XM_002687107:425_cdna Constitutive 0 NULL GeneID:100336970 4 GENE LOC100336970 NULL TCRVB26-like EMBV3_17175 ACAGAAACTGCGAAGAAGATTTCAACTCCTGTGGGTCTCCTTACTTAGCAACCAAAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33686 GTACCTCCAATATGCGTGTTTATTGCTAAATTATATCCAGGCACTACTGGCATTCTGTAT Gene GeneID:539701|FKRP:NM_001099714:358_cdna Constitutive 1 NULL GeneID:539701 18 GENE FKRP NULL fukutin related protein EMBV3_28920 GTCCAGGTGGTTCGAGGGCACTACAAAGGTCAGCAAATTGGCAAGGTAGTCCAGGTGTAT Gene GeneID:534970|RPL26L1:XM_002696272:76_cdna Constitutive 1 NULL GeneID:534970 20 GENE RPL26L1 NULL ribosomal protein L26-like 1 EMBV3_37749 GGAGCTGAGTGCTTCCTTCTCCTACGACGTGTGTCCCCAGTAGTTGATTAGAGACGCCGT Gene GeneID:511863|DPYSL4:NM_001163783:2_cdna Constitutive 0 NULL GeneID:511863 26 GENE DPYSL4 NULL dihydropyrimidinase-like 4 EMBV3_40474 GGACTCCTGATAAGTCCTTGAAGAAGAAAGCGTCACTGTGCTCCTCTCCGACTGGAAATG Gene BVT0102_111865 + 0 NULL GK000017.2:19438717-19729365 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03650 TAGAGTTGTTTGGTTAATCTATGCTTTTGTATTTCTGTCTTAAATTGGCTTGTCCATTTC Gene GeneID:281368|OLR1:NM_174132:10_cdna Constitutive 0 NULL GeneID:281368 5 GENE OLR1 NULL oxidized low density lipoprotein (lectin-like) receptor 1 EMBV3_38060 CCTCAGCGGTCTTTATAGTCTGTCATGATTCTGGCCTTGCTCTCTATCCAGCTTTATCGC Gene BVT0102_002833 - 1 EMBV3_08583 GK000016.2:75213791-75228236 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21088 GTGCTCACCTGTATCAGCTGGCCCCTGTCGGTCTTCGGCTTCCTGGCCACCTTCCTCTGC Variant GeneID:532269|CMTM7:NM_001075960:146_cdna 357^455 2 EMBV3_25809 GeneID:532269 22 GENE CMTM7 MGC140576 CKLF-like MARVEL transmembrane domain containing 7 EMBV3_33498 GGTGGTTCAAGAAGTTTTACGAAGGAGATGAGAGCCTTGAAGATGAGGAGTGCAGTGGCC Gene BVV0101_040176 + 0 NULL GK000006.2:25136268-25578633 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049597 TCONS_00043334 TCONS_00043335 2 XLOC_029728 XLOC_025915 NonCoding TCONS_00043334 XLOC_025915 NonCoding NonCoding - 13:61686613-61693659 - TSS32071 1234 1 TCONS_00043334_5 92 0.0713128038897893 3 0.825266146202981 0.00142150780206452 0.000502585228278635 0.00139850123892833 0.000198333338842308 0.000157823010350176 0.000275381073072785 0.00136680824665585 0.000668202857242925 0.000778623451293756 0.000283411576198509 2.08158395776788e-05 2.79801150270949e-06 0.000109283963536571 7.03941219793088e-05 0.000470392350083918 0.000315338803637417 0.000228300459672753 1.60589404794724e-08 0.00065749841612671 3.7776813588658e-05 4.82919917206149e-06 7.79737066594616e-05 0.000267638422097945 0.000176196387269301 0.00100781714482363 0.000340514138199996 0.000352060661751976 2.30720417750588e-05 4.31302263054515e-05 0.000158170410306393 XR_227603.1 LOC101906008 PREDICTED: Bos taurus uncharacterized LOC101906008 (LOC101906008), 0.0 1945 100.00 0.872771474878444 NM_001243723.1 SETMAR Homo sapiens SET domain and mariner transposase fusion gene (SETMAR), transcript variant 2, mRNA. 0.0 1097 82.80 0.813614262560778 0 noncoding GAGCGGTGGGGCGGGGCCCACAGTGGGCCCGCCCCCCGAGGGGAGGGCCGGGAAGGCCGAGACCTTGTGAGCCTGGGAATCCCGGCTCTGCCGCCTGCCATGTTTCCTTAGGCAAGTCTGTTTCCGTCTCCGTGCCCCAGCTTCCCCAATAGTAAAGTGTCATCTCCTGTAATACCCAGACAGCCTCCAACCTCTTTGTCATTTTAAGGCAGACCAGACTATGGAAATGATGTTAGACAAAAAGCAAATCTGAGCAATTTTCTTACTTGAATACAAAATGGGTCGTAAAGCAGCAGAGACAATTGGCAACGTCAACAACACATCTGGCCCAGGAATGCACAGTGCAATGGTGATTCAAGAAGTTTTGCAAAGGAGATGAGAGGCTTGAAGATGAGGAGTGCAGTGGCTGGCCATCGGAAGGTGACAACAACCAATTGAGAGCAGTCACTGAGGCTGATCCTCTTACAACTACACCAAAAGTTGCCAAAGAACTCAGTGTCAGCTATTCTACAGTTGTTCGGCATTTAAAGTAAATTGGAAAGGTGAAAAGGCTTGGTAAGTGGGTGCCTCATGAGCTGACTGCAAATCAAAAATATCGTCATGTTGAAGTGTCATCTTTTCTTATTCTATGCAACAACAACCAACCATTTCTCAATTGGGATTGTGACCTGCAATGAAAAGTGAACTGCATACAACAACCAGCAATGACCAGCTCAGTGGTTGGAGTGAGAAGAAGCTCCAAAGCACTTACCAAAGCCAAACTTGCGCCAAAAAAAGGTCATGGTCACTGTTTGGTGGCCTGCTGCTGGTCTGATCCACTGCAGCTTTCTGAATCCTGGTGAAACCATTATATCTGAGAAGTATGCTCAGCAAATCAGTGAAATCACCAAAAACTGCAGCCGGTATCAGTCAACAGAAAGGGCCTGACGAAAGGTCGCACAACCAAAAGTTGAAGGAATCGGGCTACGATGTTTCGCCTCATCCGCCATATTCACCTGACCTCGGCCAACCAACTACTACTTCTTCAATCATCTTGACAACTTTTTGCAGGAAAAACACTTCCACAACCAGCAGGATACAGAAAATGCTTTCCAAGAGTTCGTTGATTTCTGAAGCATTGATTTTTATGCTACAGGAGTAAGCAAACTTATTTCTAGTTGGCAAAAATGTGTTGATTGTAAAGGTTCCTGTTTTGATTAATAAAGATGTGTTTGAGCCTAGTTATAATGACTTA TCONS_00043328 TCONS_00043331 TCONS_00043332 s 3' 3015 TCONS_00043328 TCONS_00043331 TCONS_00043332 s 3' 3015 EMBV3_37909 GCTACAGAGACACTGCTCAGTGAGACTATATACATTCCTTGAGAGAATTATCCTGATGGC Gene BVV0102_099729 + 0 NULL GK000008.2:56552113-57490552 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12508 GAAGAGACCCCAATGAGAAGCCTGTGCGCCATAACTAGAGGAACCCCTTGCAACAATGCA Gene BVV0102_023055 + 0 NULL GK000022.2:50234680-50281952 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131368 1 XLOC_080073 NonCoding TCONS_00131368 XLOC_080073 NonCoding NonCoding - 22:50264102-50264325 - TSS98235 223 0.910313901345291 1 0 1.22024102577697e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000236875069994857 0 0 0 0 2.87388693433399e-06 0.000366042280471396 0 0 0 0 0 0 0 1.34803380247553e-05 XM_005203203.1 RCC1 PREDICTED: Bos taurus regulator of chromosome condensation 1 (RCC1), transcript variant X1, mRNA. 1e-41 172 84.34 0.73542600896861 0 noncoding CTGGGAAGATCCCACATGCTGCAGAGCAACTAAGCCCATGCGCCACAACTACTGAGCCTGTGCTTTAGAGCCTGGGAGCCACAACTACTGAAGCCCACCCACCATAGAGCCTGGGCTCCACAACAAGAGAAGAGACCCCAATGAGAAGCCTGTGCGCCATAACTAGAGAAACCCCTTGCAACAATGCAACCATAAATAAATAAAGACTATGAGCTACCTAGAG TCONS_00128920 TCONS_00128921 . 3' 17625 TCONS_00128920 TCONS_00128921 . 3' 17847 EMBV3_00226 AGAGCGTGGGCTCTTTCTGCTGTGACCGGAAGTGGTGCTGAGGTCCGAGTTCAAGTTTTA Gene BVT0102_110483 + 1 EMBV3_18273 GK000021.2:70905042-70919233 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09527 AAAGAACAAGGAAGTATGCAACAACCACAGGCAGATGAAGCCTATCTCATCGGCCCCGCT Variant GeneID:513504|MCCC1:XM_002684887:111_cdna 232^368 1 EMBV3_00015 GeneID:513504 1 GENE MCCC1 NULL methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) EMBV3_28311 GGGAATGAAGTGTACAAACTGTGGAGGAGACGACAAAGTGAAGAAGGCCCGGATAGCCAT Gene GeneID:512975|CLDN7:NM_001040519:96_cdna Constitutive 0 NULL GeneID:512975 19 GENE CLDN7 MGC128273 claudin 7 EMBV3_12095 ACGTCAAGTCAGTGTATCAATTTCCAGTGCTGTGAGGTCAGCCCCTGAAGAAAACTCACG Gene GeneID:540287|GPR183:NM_001046472:32_cdna Constitutive 0 NULL GeneID:540287 12 GENE GPR183 EBI2 MGC140408 Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor) EMBV3_33218 GACATGGAACAAGAAGATGCAGCAGAAACCGTCAAAACGAGGGGGAACGAGTCATCCATC Gene BVT0102_429240 + 0 NULL GK000015.2:8922844-9446545 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060546 TCONS_00060548 TCONS_00060547 1 XLOC_036766 Coding TCONS_00060548 XLOC_036766 Coding Coding - 15:9056466-9084676 - TSS45254 378 1 TCONS_00060548_1 113 4 0.986741819986529 0.00816896999583265 0.00124661156344436 0.000626233920712604 0.000511942115285184 0.000544300997856957 0.000722342054668558 0.0010367645552085 0.000941152925304344 2.92766329931396e-05 8.7724870758756e-05 0 0 0.000430050278776459 1.62937799479132e-10 3.57408707263108e-10 0 0 0 4.70494966095431e-07 0.00264324499798367 2.465447650791e-10 0 0 0 0.000116369435675959 0.00232322977641661 0.000946164175225874 0 0 2.88097152162637e-10 NM_014361.3 CNTN5 Homo sapiens contactin 5 (CNTN5), transcript variant 1, mRNA. 1e-121 439 92.08 0.798941798941799 TCONS_00060548_1 sp|O94779|CNTN5_HUMAN CNTN5_HUMAN Contactin-5; 8e-57 192 92.93 0.867256637168142 1 coding 0 0 0 0 GTGGCTGTGTGGTCAGAACAACAACAAAAGAAATCAAATGAAACTTAGATCCTGTTTATACCTTCACAAGGTAAAAGAACCCACTGCTGCTCCCACAGATGTCAAGGCTACAAGTGTATCTGTGTCAGAGATTCTTGTTGCATGGAAACATATTAAAGAGAGTCTAGGAAGACCACAGGGATTTGAGATTGGTTATCGGAAAGACATGGAACAAGAAGATGCAGCAGAAACCGTCAAAACGAGGGGGAACGAGTCATCCATCATCCTGACAGGGTTAGAAGGAAATACATTATATCACTTCACAGTGAGGGCTTATAATGGAGCCGGATATGGGCCACCCAGCAGTGAAGTGAGTGCAGCCACCAAGAAATCCCGTCC TCONS_00060549 s 3' 390078 TCONS_00060549 s 3' 361870 EMBV3_12885 GGCTGCTTTGAAGTGTGAGGGAACGCAGAGGGAAGAGCCTGAGACTGGAATGGATGGAAG Gene BVV0102_424621 - 1 EMBV3_33746 GK000018.2:52660203-52732807 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11045 CAGTGAGATAAAACTAAAAGAACAACAGGCTAGGGGTTGAAAATGTTATTCCTGGGAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14236 CTCAGAATGGCACCAGGCCCCTCATCCATAAGATGCATTTTGGAATAATCTTGGCACCAG Gene BVT0102_399483 + 1 EMBV3_02977 GK000018.2:58735243-58755297 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188848 TCONS_00169788 TCONS_00250376 TCONS_00091433 TCONS_00087263 TCONS_00169790 TCONS_00210913 TCONS_00087262 TCONS_00091303 TCONS_00065232 TCONS_00084921 TCONS_00169786 TCONS_00055104 TCONS_00169787 TCONS_00078429 TCONS_00084513 TCONS_00166151 TCONS_00070927 TCONS_00091898 TCONS_00140862 16 XLOC_114889 XLOC_103444 XLOC_153319 XLOC_056208 XLOC_052424 XLOC_129423 XLOC_056078 XLOC_039954 XLOC_051756 XLOC_032913 XLOC_047317 XLOC_051600 XLOC_100989 XLOC_042704 XLOC_056668 XLOC_085291 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_22691 TATGCCCCCGTCTTCCCCGTGTCCTTGGGTGTAGATCCCATCGCTCATCTGTGTAGAGAA Gene GeneID:522378|CPSF3L:XM_002694134:500_cdna Constitutive 0 NULL GeneID:522378 16 GENE CPSF3L NULL cleavage and polyadenylation specific factor 3-like EMBV3_42565 GGAACCCAGGAGTGAGCAGACTCTTACAAGGGAGGAGCACGGAGAAGTATTTGCCAGAAG Variant GeneID:514159|ACSL5:NM_001075650:42_cdna 61^245 1 EMBV3_21517 GeneID:514159 26 GENE ACSL5 MGC138948 acyl-CoA synthetase long-chain family member 5 EMBV3_04686 AAGTTCTCCAGCAAGTCGGATGTCTGGAGCTTCGGGGTGCTGCTATGGGAGGTCTTCTCA Gene GeneID:504668|MATK:NM_001035011:179_cdna Constitutive 1 NULL GeneID:504668 7 GENE MATK NULL megakaryocyte-associated tyrosine kinase EMBV3_05542 AGCCAACAGCAGACAACGCCTATGAGTACTTCACCAAGATCGCGTCCAGCCTGTTTGAGA Gene GeneID:514090|BAK1:NM_001077918:119_cdna Constitutive 0 NULL GeneID:514090 23 GENE BAK1 NULL BCL2-antagonist/killer 1 EMBV3_00470 CTACATGCACCACAAGTTCGCCATCGTGGACAGGAAGGTGCTGATCACTGGCTCCCTCAA Gene GeneID:526651|PLD6:XM_002695829:209_cdna Constitutive 0 NULL GeneID:526651 19 GENE PLD6 NULL phospholipase D family, member 6 EMBV3_28510 CGCGGGTCTTCTGGCTCGGCCTCATCGTCTGTCCCATGATTTGGATCGTGTTCTTTTTTA Gene GeneID:100139027|LOC100139027:XM_002697961:677_cdna Constitutive 1 NULL GeneID:100139027 25 GENE LOC100139027 NULL similar to Uncharacterized FAM18-like protein CG5021 EMBV3_27932 GGATGACTTCCACCCCCAACCAGTCTCTGGAATATCGAAAAAGAAGCTGGTGAAGAACCC Gene GeneID:781494|LOC781494:NM_001101279:8_cdna Constitutive 0 NULL GeneID:781494 21 GENE LOC781494 NULL similar to Myeloid-associated differentiation marker EMBV3_43036 GTGCTGCAGGAGCCAGACATGGAGTATCAGCTCTCCCCACCTGGTGCAGGTGCGTGAGCG Variant GeneID:505809|FPGS:NM_001024480:34_cdna 176^423 1 EMBV3_18453 GeneID:505809 11 GENE FPGS NULL folylpolyglutamate synthase EMBV3_40081 AGATCGAATCTTCAGGGGCTGTGACTGTGCTCTCAACCACCTGCTTCCATTCAGAGGAGG Gene GeneID:100337445|LOC100337445:XM_002691204:11_cdna Constitutive 0 NULL GeneID:100337445 11 GENE LOC100337445 NULL hCG40738-like EMBV3_34335 CCTGTTTTTGCTGCACTTATTTACTATTTCCCACATCTCGTCCCTGCCTTCCCTATCGCC Gene GeneID:528664|LRRC4C:XM_002693527:123_cdna UTR3_Alt 1 NULL GeneID:528664 15 GENE LRRC4C NULL leucine rich repeat containing 4C EMBV3_40514 AGATCCCTTGAGGCAAAGGACAAGATGACCCAGCTGTGCGCTATCTCCTGGGCCGTGGGG Variant GeneID:617553|BAT4:NM_001076468:207_cdna 812^965 1 EMBV3_43052 GeneID:617553 23 GENE BAT4 MGC142337 HLA-B associated transcript 4 EMBV3_12637 GGAGTTGGGTAACTCACTTGTGTACATTTTAATTGAGTGATTTGAGAAAGAAACTGGATG Gene BVT0102_187982 + 0 NULL GK000016.2:72553304-72570537 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070137 TCONS_00070139 TCONS_00070138 TCONS_00070140 TCONS_00070136 1 XLOC_042144 Coding TCONS_00070139 XLOC_042144 Coding Coding FLVCR1 16:72568218-72596988 j TSS52151 4043 1 TCONS_00070139_3 556 0.0739549839228296 11 0.859849143174945 0.000551733691364251 5.49382661520617e-05 0.000380946604019225 5.78470446117023e-05 9.65626074761002e-05 1.58240884665259e-08 4.50326215764543e-05 6.06303718185382e-74 2.87171958394418e-05 4.81913604860792e-10 2.62110571128564e-09 1.26237060579566e-14 9.53427248365076e-14 1.16455223540303e-09 1.40971678879846e-09 0.00222803097293544 3.95777214993721e-07 0.000124115969887379 0.000502379720008679 0.000394492409188141 0.000193933116042311 0.00128915109433188 3.46537785626393e-08 0.000225828914087065 0.000104426096127959 0.000162893571526764 0.000343001198985613 1.21380375757116e-06 0.000249547049531073 0.000509816403180423 NM_001206019.1 FLVCR1 Bos taurus feline leukemia virus subgroup C cellular receptor 1 (FLVCR1), mRNA. 0.0 3627 100.00 0.49715557754143 NM_014053.3 FLVCR1 Homo sapiens feline leukemia virus subgroup C cellular receptor 1 (FLVCR1), mRNA. 0.0 2105 87.33 0.4232005936186 TCONS_00070139_3 sp|Q9Y5Y0|FLVC1_HUMAN FLVC1_HUMAN Feline leukemia virus subgroup C receptor-related protein 1; 0.0 968 86.33 0.998201438848921 1 coding 0 0 1 1 0.0176644685946208 0.884300150654558 0.00322033169942927 0.957704522991797 GGGGCGCCCGGGGACATGGCGCGGCCGGACGATGAGGAGGGGACCGCGATGGCGAGCGGACACCCGCCGGCGAACGGATACCTCCCAGTCCCGGGGGACGCGCCGGCCGGAAAGGTGAGCGCGGAGACGCAGAACGGGCCCACGGCCGGCTGTCTGGCCTTGAACGGGGTTTCTCGGGACAGCACCAAGGCCACCGCCTCGGGAACCCCGGACGGGCCGAAGACTCCGCTGGCCCCGGAGGAGGAGACCCAGGCCCGGCTGCTGCCCAAGGACCCGGGCGAGGAGACCCCGGGGGGCGAGGGCACGCTGGTGCCCCGGATCGCGCTCTCCCCGAGGCGCTTTGTGGTGTTGCTTATTTTCAGCGCCTACTCCCTGGTGAACGCCTTCCAGTGGATCCAGTACAGCATCATCAGCAATGTCTTCGAGGGCTTCTACAACGTCTCCTCGCTGCACATAGACTGGCTGTCCATGGTGTACATGCTGGCCTACGTGCCCCTCATCTTCCCAGCCACCTGGCTGCTGGATACCAGAGGCCTGCGGCTCACCGCCCTGCTGGGCTCCGGCCTCAACTGCCTGGGCGCCTGGATCAAGTGCGGCAGCGTGAAGCAGCATCTCTTCTGGGTCACCATGCTGGGCCAGTGCCTGTGTTCCGTGGCCCAGGTGTTCATCCTCGGCTTGCCCTCCCACATCGCTTCAGTGTGGTTTGGGCCCAAGGAGGTGTCCACAGCTTGCGCCACCGCTGTGCTAGGGAATCAGCTTGGAACTGCAGTTGGCTTTTTGCTGCCACCAGTTTTAGTGCCCAACACACAGAATAACACACAACTGCTGGCTCGTAATATCAGCACCATGTTTTATGGAACATCAGCTGTCGCCACACTTTTATTTATTTTAACAGTAATTGCATTCAAAGAAAAACCTCAATATCCACCAAGCCAGGCTCAAGCAGTTCTCCAAGACAGTCCACCCGGAGAGTACTCCTATGTGAAATCAATAAGGAACCTATTTAAAAACATTCCTTTTGTCCTTTTATTGATCAGTTATGGTATCATGACTGGAGCATTTTATTCAGTCTCAACATTATTAAATCAAATGATACTGACACATTATGAGGGAGAAGAAGTGAATGCTGGAAGGATTGGGCTAACACTAGTAGTAGCTGGAATGGTGGGATCTATTCTTTGTGGCTTATGGCTGGATTATACCAAAACATACAAACACACTACTCTGACTGTTTACATTCTGTCTTTTGTTGGAATGGTTATCTTTACTTTCACACTGAACCTTGGACACATTATCATCGTCTTTGTCACTGGAGGGTTGCTTGGTTTCTTCATGACTGGTTACCTCCCCTTGGGTTTCGAATTTGCTGTTGAAATCACTTACCCTGAGTCTGAAGGGACTTCGTCCGGTCTTCTTAATGCTGCCGCACAGATATTTGGAATCTTATTCACACTGGCCCAAGGAAAGCTTACATCAGCGTATGGTCCTAGAACGGGGAACGTTTTCCTCTGTGTCTGGATATTTGGCGGCATCATTTTAACAGCATTAATCAAGTCAGATCTGAAAAGACACAATATAAATAAAGGAATTACAAATGGCGATATTAAAGCTGTACCAGTTGATAGCCCCACAGATCAAGAGTCAAAAACTGTCCTGATGTCCAAACAGTCAGAGTCAGCAATTTGACGTGAAAGGAAAAGTAACATCATGTGATAATTGAATAGTAAAGCCTGGTTTATAGGTTATGGAGAATGGACACTTACTTGAAAATTATTATGTGACTCCTAAATGCAGTTACTGTTTTTTTATTTAATTGTTAATTTAAAGTACTTTTGCTGACATTTTAACATAGAAAGTAGAAGCTTAGGAGGCTTTCTAAAATGATAATATGGAGGTCCATGCCCTTCAAATTGCATAGGAGTACATGCAACTTGTTTATTTAAATATGCTATCCAGTGGAACCAAGTGAACAATATATTACTAATTATCTCCCTTTCCATCCCTGATAGCTCAGTTGGTAAAGAATCCACCTGCAACGCAGGAGACCCTGGTTTGATTCCTGATCAGGAAGATCTGCTGGAGAAGGGATAGGCTACCCACTCCAATATCCTTGGGCTTCCCTTGTGGCTCTGGTAAAGAATCTGGTAAAGAATCTGCCTGCCCTGCAGGAGACCTGGGTTTGATCCCTGGGTTGGAATATCCCCTGGAGAAGGGAAAGCCTACCCACTCCAGTACTCTGACCTGGAGAATTCCATGGACTGTCCATGGAGTCGCAAAGAGTCAGACACGACTGAGCGACTTTCACTTCACTTCACTTGGCGTTGTTCATACCAGCTGTCTAAGCCCCTCAGTGTGAAACAGTATACCAATACGATACTTTTAACCCACCAACGGACACTATTGGGATGAGACTTTGAGATGACCTCTATGATTTTTCCCATTTCTTACCATTCTCATTAGAAACTGCTTTGTTACAGGTACTGTCCGTGGCCATAAAAACTCTTCAGTGCGTAGATGGAACTCATACCTTTGGTCTTAGGCTTGTGTTCTCGTTAAGCGAAGAAGCCCAGACACAGACTCGTTGTCCTGAGTTGGTCTCTGTGCTGCCTTCCCGGTCATTACCATTCTCCTCCGAGGAGTCCTGTGCCCACGTCTGTGCTCCCTCAGTGCGCTGGGCACGTGGACTCCTTTCTTCACCACGAATGTGCACAGGCTCCGACCTCCTGGAACAGCGTGCTGTTTTCTGTGCTCAGGGTAAGGAAGACAGGACCAAATGCGTTTCCACAGTGCCTACCACTGCGTTTTGTTTACAGTGAGAATCTCAATGTTGTTCACGTCCTGGCTCTCCAAGCTGATAGGGAACATCTTTAGAGTAATGACATTGAAACAGCCGTGATATTTGTATTATGTCCACATAAACACAAAAAGCCAATCAGGTATTCCCTTGAATACCCTTGAAGTGAATTAGCAATTAGCTATGTGCATTGCTTAATATTAAAATTATAGCAATCTCCATAACCAAACGACAGGAAATTATGTGGAATCTTACCCTGGAGAGCGTGTTACCAGAAGAACTTAGCTGGGAATCAGGAACTTCAGGTCTGTGTCCTGGTGGATCTGTTTCTAGCTTCCCTGTAAATCTCCAGGCAGCATTTTCCTCATCTGTATGTAATGAATGTAAAATCTGATCTCAAAGATCATTTTTTGAATCTTAAATGCACTCATCAGGGGACAGACCAAATCACTGTAGCACAGGAACTTAAATCTAGCTGGAGGAAAATTCCCTGGACAATTGAATAAACAACTGTGGTTGTTACCTTGTAGATACAGGGAATTTAATGTCTGTTTTCAGCCTTTTTGTTCAGTTGGTGATAGCTCAGGCAGATGATGCTGTATCATTAACTTCCCTAGATAATCACATCACAGATTTTATGGCCAAAAATATATTTTAAGGTCCCTCCTTTAAATGATTGTTTTTATTTTTAAACTGTCAATGTTGTTTCAAATAATCATGTCCTTGTCAAGTTCCTGAGGTTTTGAACAAATTACAGATAAAAGTTGGAATATTTTATTCCTGAAAAGTGTATATACATATATGTCATGTGTATTTGTCCTAGTTGATTAGAAAAAGAATGAAATATTACATGGCAGAACACAAAATGAATTGATAAGTTTTTTGTATTTTTAGTTAAATTTGTAATATGTCAGACAAGAATATCATACAATTCTATGTTGTATCTTTGAAAAATGGAGTTGGGTAACTCACTTGTGTACATTTTAATTGAGTGATTTGAGAAAGAAACTGGATGCTTTCAAAAGTATTTTGAAATGTTCCAAATATAGCTTTTGCCTTTTGTGAATGTTGGAGAAATATCTTTAAAAATGTGTTTTAAAAATATGTGTAAACTAATAGAGTATTGCCAGAGAATGCCTGTCTGTCTTAAGTCATTTTTTATTTTCTAATTTCTGCTCTTTGTACTATTTAGCTATATGCTTGTTCTTCAGTATTTCAGACCTCAGATAAATTTATTTTTTTAATGTTA EMBV3_04872 GGCAAGTTGATAACGTGTGATTTATCTTCTAATAAGTTATGGTGGGAGGAGCCCGCGGTG Gene GeneID:281312|MSRA:NM_174114:15_cdna Constitutive 2 NULL GeneID:281312 8 GENE MSRA NULL methionine sulfoxide reductase A EMBV3_37170 GTACCGGAACTCGGATTTCGCCCATCTCATTCCCTTGACGATGTTATACCCCAAGAACCA Gene GeneID:535359|ZNF827:XM_002694328:34_cdna Constitutive 0 NULL GeneID:535359 17 GENE ZNF827 NULL zinc finger protein 827 EMBV3_05120 CACACTGCTTGGAGAAAAGTGGAACCAACCAGAATCAGACCTGTGGCTAATAGAGAAACC Gene GeneID:513251|LOC513251:XR_084598:100_cdna Constitutive 0 NULL GeneID:513251 17 PSEUDO LOC513251 NULL similar to UPF0462 protein C4orf33 EMBV3_14047 AACGCGCTTAACATGGGCAAGGTTCGTAAAAGAGAGGGGGAAGCCAAGAAGACGCCCTGT Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_13857 CAGGTAACCAGCAGTGAGGACCTGCCTATTCCAATGGAAAATCCTTACAAGGAGCCTCTG Gene GeneID:613561|MRPS18C:NM_001046508:34_cdna Constitutive 1 NULL GeneID:613561 6 GENE MRPS18C MGC136995 mitochondrial ribosomal protein S18C EMBV3_33443 TCTTATATCTAGATTTCTGATTATGTAAAAGCAAGTTATTGAGAATAATACTTAAGATTT Gene GeneID:100337356|LOC100337356:XM_002684912:1_cdna Constitutive 0 NULL GeneID:100337356 1 GENE LOC100337356 NULL N-acetylated alpha-linked acidic dipeptidase 2-like EMBV3_09101 TGACAGTTTCCGGCATCTCTACCCCAACACCGCCTATGCCTACACCTTCTGGACCTATAT Gene GeneID:281630|APEX1:NM_176609:16_cdna Constitutive 1 NULL GeneID:281630 10 GENE APEX1 APEN BAP1 MGC139790 APEX nuclease (multifunctional DNA repair enzyme) 1 EMBV3_11068 CCAGTCAGCTTTGCCTTCAGCATTTCTAGAAAGTTCTACATTCATGAACATGGTGTGCCG Gene BVV0102_228599 + 1 EMBV3_02234 GK000005.2:44116240-44127710 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194790 1 XLOC_117843 Coding TCONS_00194790 XLOC_117843 Coding Coding FRS2 5:44126999-44232760 j TSS145274 2646 1 TCONS_00194790_5 508 9 0.975066187594554 0.000321365374771353 3.3958701265866e-09 0.000138991680273113 0.000684387872956429 0.000954726936045911 6.68861396400149e-05 0.000888394772823063 0.000717545321603419 0.00105495696514195 0.000124754949134735 1.5535861403333e-05 0.000348517000717561 3.18319913420967e-16 3.35864569930367e-05 2.03232365879513e-12 0.00337990237490761 0.00103724995179821 0.00189685905847646 0.000179830595150643 0.000512423591055238 1.31210310442034e-11 0.0003383231781539 0.000715095561849129 0.00042851949530282 0.000127029629183516 0.000736489916656287 0.000205763717028677 0.000367878270852228 4.97482641836462e-05 1.37714578478746e-05 XM_581582.6 FRS2 PREDICTED: Bos taurus fibroblast growth factor receptor substrate 2 (FRS2), transcript variant 1, mRNA. 0.0 4329 100.00 0.906651549508692 NM_001278356.1 FRS2 Homo sapiens fibroblast growth factor receptor substrate 2 (FRS2), 0.0 3680 90.79 0.999622071050642 TCONS_00194790_5 sp|Q8WU20|FRS2_HUMAN FRS2_HUMAN Fibroblast growth factor receptor substrate 2; 0.0 1036 98.23 0.998031496062992 1 coding 0 0 0 0 0.0269081458287381 0.847224434955701 -0.00347512359333869 0.949990235444212 GTGCTTTTCTAGGGTTCGGGCCGTAGAGAGGCCTTGTAGGCACAGCCGCTGAGGCTTGGTCGGCTCTGAGGAGGGGCGCCTACCCGTGTGGGAGCCCGGGGTTTAGCGCCGGTCGACCCGCGCCCTGGCCCCTCTCACCTCCCGGGCAGCCGAAATGACCTTTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCAATTTGTCATAAAGATGCAGCTGTGGCTTTTCAACCAGATTAGGACAAAATTGTATCTGTTTTTCTCAGAAGAGAATTCCACAAGGTTAAGTCAGCAAACAAAGAAAACATGGTGTTTTGAAGTATGATTAAACTCCTGATGCTGCAGCAGAGGCTAAGAATATTAATGGCCAGATCTAGTGCTCACATGGTCTTCTGAAGAAGCCATGGGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTCCCAGATAACCATCGGAACAAGTTTAAGGTCATTAATGTGGATGATGATGGAAATGAGTTAGGTTCTGGCATAATGGAACTTACAGACACAGAACTGATTTTATACACTCGCAAACGTGACTCGGTAAAATGGCACTACCTCTGCCTCCGACGCTATGGTTATGATTCGAATCTCTTTTCTTTTGAAAGTGGTCGAAGGTGTCAAACTGGACAAGGAATCTTTGCCTTTAAGTGTGCTCGTGCAGAAGAATTATTTAATATGTTACAAGAGATTATGCAGAATAATAGTATAAATGTAGTGGAGGAACCCGTGGTTGAAAGGAATAACCATCAGACAGAATTGGAAGTCCCTAGGACACCTCGAACACCTACAACTCCAGGGTTTGCTGCTCAGAACTTACCCAATGGATATCCCCGATATCCCTCGTTCGGAGATGCTTCATCCCATCCTTCCAGCAGACATCCTTCCGTGGGAAGTGCCCGCCTGCCCTCAGTAGGTGAAGAATCTACGCATCCTTTGCTGGTGGCCGAGGAACAAGTACATACCTATGTCAACACTACAGGTGTGCAAGAAGAACGGAAAAACCGCACAAGTGTGCATGTCCCATTGGAGGCAAGAGTTTCTAATGCTGAAAGCAACACACCAAAAGAAGAGTCAAGTAATATTGAGGACAGGGACCCTCAGATTCTTCTTGAACCCGAAGGAGTCAAATTTGTCTTAGGACCAACACCAGTTCAAAAGCAATTAATGGAAAAAGAGAAACTGGAACAACTTGGAAGAGATCAAATCAGTGGAAGTGGTGCAAATAACACAGAATGGGACACTGGCTATGACAGTGATGAGCGAAGAGATGTGCCCTCTGTTAACAAACTGGTGTATGAAAATCTAAATGGCCTATCTCTCCCCAGTGCTTCAGGGTTCAGGAGAGGTCGTCTGCCGTCCACCAGTACCTCAGATACCCAGAATATCAACAACTCAGCTCAGAGAAGAACTGCATTGTTAAACTACGAAAATCTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGAAGATGACAACTTAGGACCAAAGACCCCATCTCTGAATGGCTACCATAATAATCTAGATCCAATGCATAACTATGTAAATACAGAGAATGTAACAGTGCCGGCGAGTGCTCACAAAATAGAGTATTCAAGGCGTCGGGACTGTACGCCGACAGTCTTTAACTTTGATATCAGACGCCCAAGTTTAGAACACAGGCAGCTCAATTACATACAGGTTGACTTGGAAGGTGGCAGTGACTCTGACAACCCTCAGACTCCAAAAACGCCTACCACTCCCCTTCCACAGACCCCTACCAGGCGCACAGAGCTGTATGCTGTGATAGACATCGAGAGAACTGCTGCTATGTCCAATTTGCAGAAAGCACTGCCGCGAGATGATGGTACATCTAGGAAAACTAGACACAATAGTACTGATCTGCCGATGTGAGCCCTGGAAAGCATTTACATTATTTGCACCTTTGTGAAGTTTTTTTTTAAAAAAATGAAGACGCAAGTGCTTCATTTTTATTTCTGAACACTAACTCCTTTTGTAGACTGATAGAAAAAATTTTTTCTGAATATTTCATGTGCTTCTTTAAAGGGAATTAATGTAGAGCAGGTACTCATAAAAGAACACTAATTTCATTATATACTACTCATTACTGTACAGCAGCATTCCCATTTTCACAGTGCCTATTTAAAATGAGAGTTGAAGTGAGTGACATGCTGGTCGATTTTTATCAAAATTCTGAACTCATGTATCATTCATGTGTAAGTCATGGTTGGCATTTAAAACAGAGCCTCTTGATAACATGCATTGCTAACAGATAACTGTAGCTTTGAAAGTACTATTTGTAGATTCACTATTCATGGTATGTGGCCTCCAGCATGTAACATCAGGAATCCTTTATTTCATTAATTGTAGGCTTTTTGACTTGAGCCAAAACATATGTAATGGAAATAGAAGTACCACACCTCCTACGTACCAGTCAGCTTTGCCTTCAGCATTTCTAGAAAGTTCTACATTCATGAACATGGTGTGCCGTTGATGTGTTGAAAGGCAAGAAAGAGATGAGATTTTCTGTTTCGTCATCTCATGATGTCATTTGAAGGGCATGCCCAAGTATCTTAATCAGAATTATAAACAGGCTCAAGAATC EMBV3_16516 CTTAGGTAATGTTATTCTCCTCAGAGGCCAGCAGAGGGTGCAAAATACAACCCTTCCAGG Gene GeneID:539598|ZCCHC8:XM_002694484:337_cdna UTR3_Alt 3 NULL GeneID:539598 17 GENE ZCCHC8 NULL zinc finger, CCHC domain containing 8 EMBV3_37306 TGGGAGTGCAGCCAGAAATGCCAGCAGCCTCTTGTCCTCAGTCCTACAAACCAAAATCCT Gene BVV0102_074415 + 0 NULL GK000003.2:92014267-92038810 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170652 TCONS_00170647 TCONS_00170653 TCONS_00170649 TCONS_00170650 1 XLOC_103623 Coding TCONS_00170650 XLOC_103623 Coding Coding DHCR24 3:91981588-92016613 j TSS127453 4377 1 TCONS_00170650_4 550 0.147132739319168 10 0.875314070351759 0.000348531342987547 0.000455816037301735 0.000856535967230872 0.000128973517976423 0.000444601546136572 0.000118858867558363 0.000255379596037206 2.52760048628955e-09 0.000246908437518553 2.47234554199141e-52 2.23194097741571e-47 4.14026128871415e-08 8.41887392486649e-10 7.42214404145804e-06 8.36136947823136e-06 0.0162376686248511 0.000374567016699627 1.99633770086956e-16 0.000372356783874058 0.00104754441016259 1.22959865692996e-05 0.00361140173704216 1.17201958419196e-08 0.000138286973744146 0.000993417471015061 0.000533389172889476 0.000157686638925262 8.49065732986395e-05 0.000526288654005033 0.00186848235687435 NM_001103276.1 DHCR24 Bos taurus 24-dehydrocholesterol reductase (DHCR24), mRNA. 0.0 2901 100.00 0.36714644733836 NM_014762.3 DHCR24 Homo sapiens 24-dehydrocholesterol reductase (DHCR24), mRNA. 0.0 2255 90.84 0.371258853095728 TCONS_00170650_4 sp|Q15392|DHC24_HUMAN DHC24_HUMAN Delta(24)-sterol reductase; 0.0 1041 96.89 0.934545454545455 1 coding 0 0 0 0 1.07636792399312 0.075362509845149 -0.034636519526202 0.635189969904 TGCGAGTGCAAGCAGGCGAGGAGCCGGTGGCGGTGACAAGCGGCGCGAGCCCGCAAACCGCCTCCCGCGTGCGGCGTGCCACCGGCTCCACCATGGAGCCCGCTGTGTCGCTGGCCGTGTGCGCGCTGCTCTTCCTGCTCTGGGTTCGGGTGAAGGGGCTGGAGTTCGTTCTCATCCACCAGCGCTGGGTGTTTGTGTGCCTCTTCCTCCTACCTCTCTCGCTCATCTTCGACATCTACTACTACGTGCGCGCCTGGGTGGTGTTCAAGCTCAGCAGCGCACCGCGGCTGCACGAACAGCGCGTGCGGGACATCCAGAAACAGGTGCGGGAATGGAAGGAGCAGGGCAGCAAGACCTTCATGTGCACGGGGCGACCTGGCTGGCTCACTGTTTCACTGCGGGTTGGGAAGTACAAGAAGACACACAAAAACATAATGATCAACCTGATGGACATTCTGGAGGTGGACACCAAGAAACAGATTGTCCGAGTGGAGCCCTTGGTGACCATGGGTCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTGCCTGTGTTGCCCGAGCTGGATGACCTCACAGTGGGAGGACTGATCATGGGCACAGGCATCGAGTCTTCGTCCCATAGGTATGGCTTGTTCCAGCACATCTGCACCGCCTATGAGCTGGTCTTGGCTGATGGCAGCTTTGTGCGATGTACACCGATGGAAAACTCAGACCTGTTCTACGCTGTGCCCTGGTCCTGCGGGACTCTGGGCTTCCTGGTGGCTGCCGAGATCCGCATCATCCCTGCCAAGAAGTACATCAAGCTGCGGTTTGAGCCGGTGCGCGGCCTGGAGGCCATCTGTGACAAGTTCACCCACGAGTCCCAGCAGCCGGAGAACCACTTCGTGGAAGGGCTGCTCTACTCTCTGCACGAGGCCGTCATCATGACGGGGGTCATGACGGACGAGGCAGAGCCCAGCAAGCTGAACAGCATTGGCAACTACTACAAGCCCTGGTTCTTCAAGCACGTGGAGAACTACCTGAAGACAAACCGAGAGGGCCTGGAGTACATCCCCTTGAGACACTACTATCACCGCCACACGCGCAGCATCTTCTGGGAGCTCCAGGACATCATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTTGGTTGGATGGTGCCTCCCAAGATCTCCCTGCTGAAGCTGACCCAGGGCGAGACGCTGCGCAAGCTGTACGAGCAGCACCACGTGGTACAGGACATGCTGGTGCCCATGAAGTGCCTGCCGCAGGCCCTGCACACCTTCCACAACGACATCCACGTCTACCCCATCTGGCTGTGCCCATTCATCCTGCCCAGCCAGCCGGGCCTGGTGCACCCCAAGGGAGATGAGGCCGAGCTCTATGTCGATATCGGTGCCTACGGGGAGCCACGTGTGAAGCATTTTGAAGCCCGGTCCTGCATGAGGCAGTTGGAGAAGTTTGTCCGAAGTGTGCACGGGTTCCAGATGCTGTATGCCGACTGCTACATGGACCGGGAGGAGTTCTGGGAGATGTTCGACGGCTCCCTGTACCACAGGCTGCGGAAGCAGCTCGGCTGCCAGGATGCCTTCCCTGAGGTCTACGACAAGATCTGCAAGGCTGCCAGGCTTGCAGGCCCACCGCAACCATTGCCCAAGTCCACTCAGAGAGGACCGTGTGCTTGGAGAAGACACTTCAGGGTGGAATCCTGTCTGGGCCTGGGGCAGGTGGGGTGAGTGGTTTTGGCTCTGAATTGAATCCATAGGACCTGGGCTCATTCTTGTCTCTCTACCCTCCATGCCGCTTGTCCCCAGACCCTGCTTCAACCTGCTGGGGTGTGTCCTCCACTCTGCAGTGGGGCTGGGACTCGGGGTGGGGGGACCACACCAAGCAGGAAAATGGAGCCTGTCATCCTTAGGTCTCGTGGGGATCCTCACTGTGGCGCTGAAAGAAAACAGCATCAACTTGATTTCTCCAACCACTCATCCCCTCCTTTTTTTTTTTCCTTCCTCTCCCCACCCCCAGCTGTAGTTAATTTTAGTGCCTTACAAATCCTAAGCTCAGAGAAAAGTTAGCTTCGTGTCTATTCCAGAGGGAAGGAAACCTTCCCAGGCCCCTGCCCACCTGTTAAAGCTTGGTTGTTTATGCAGCTCCATCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCAGACTCTGAGAGGGAATTATGTAAGGGAATTAAGTGAGCTGGGCCAGGCAGTGATGTTCTGGAATAGAGGAGAGCACTGGCTGGGAGCTGGGAGGCCTGGGTTTCAGTCCTGGCTGTATTCTTCACAAGCTCTGCCTCCATGGACAAGTCATTTGTCCCTCTGAGCTGCAGTTTCCTCATCTGTCACATCCATGTACACAAGACTACCCGAGGCTCTTCTGCTTTAGAAGTGCACGGCTATCTTAAACAGCCGTGATTGCGAACCCCACGAGAAAGCCTCGTCTGCGTGGAAAGTCAGAGGGAAAGTAAATGGTCCAGGTGGGGGTTGTCTGCCATTTCAGATACTTCCTTCAGCCCACGGCCAGCTCTCATCTTTTCAGAAAGGCACATCTGTGGCCTGCAAGGAAGTGTCATTGTCACCACTGGTTGCCAGAAGCCTCCCAGGGTCACACTTTGGCTGCCAAGGCTCACTCCACGCACCCCAGGTTTGGCTCACCATGGTGTCTTGATGTGGTCCTGGGAGTGCCAGGTGCACTCGGGGCACTCAGAAGGCGGAGGAACCACTCTTACCCATTTGGCCTCTGGAGGGGGCATAAAATCAGAAACCTCATTTTCTCGCTTGTATGCAAAGCATGTGAACTCTGGCACTAGCTCCCCCAGTGAGGCCTGTGGGCTTCTTGCTCAGCGGTAAACTGATGATCCTACTTGCTGTAGAGGAAGGGTTAACCCGAGCAAGATGAGGCCCCATCCTTTCAGCAGTGGGGCCTCTGTCCCGGGACCCCTGGGAGTGCAGCCAGAAATGCCAGCAGCCTCTTGTCCTCAGTCCTACAAACCAAAATCCTGCCCTTCACAGACCTTGCCCAGAACCTGGGGCTGGGAGGGAGGGTCTTGGGGTCACACCAGCCTCAGGGTCATGTTTTGCTTCAGTGATATCTTGCCTAGAAAGGGGCAGTCTTCCAAGCATGTCAAGCTGAGTTGCCAGCTCTTTCTTGCAGCCAGTCTTGTCACTATCCAGCCAGGTGGTGGTTTCAGGTGGAATTAAACTTGGCATGTGGTGGGGTGCAGGGAGCACGTGTGAAAAGTATAAGAAGAGGCCTCTCCCTTCCAGAACCCTGAGTTTCTTGGCTGCATGAAAGTTTTTCTGTAAGATCCAGATTCTAGCCAGTTTCTTTGGCTGGAAGGATGCATAATTAGCTGTTACGGGAAGGGAGGGGGTGGGGATGGGGGTGGCAGTGTGTGATGTGTGGTATTTTTCTGAAATCATGGGGACCACAGAGAAAGGCGTGGTCCCTCTATCAGGCTCTTACAGCTGCAGGTGCTGTGCCTGCTGTCCGGAACACTTCCTGTCCCTGTGGCTGTGTGGCTGCTCCTTCTGTAAAAATAAAAGTGTGACCTGGAAAGTAGCCTCTGTCATTTCTTGCTCTGAGGACCACGATGTGGAGGCAGTCCTGGTTCAAGCGCAGGCTCTGCCCCTCACCGGGCCAGTTTCCCTTTGAACCTGCACACCCAGGTCTGGATGATGGCATGGCGGAGGGACAGGTGTATTAGGGTAGAGGGGCCAGGGTAATTTTCTTCCCCATTTTTGAATTTCTATCTTTGTCACAATGATCTGGCATGGATGTTAATAATATCTTCCTATTTGCAGGGTAGAGAACAGACTACAGGGAGAAACTGGGAAGCTAGGAGACAAGTGAGAATAGGTGAGGTGATGACTCAAAGTGGGGCTGTGCTTTTTAAGGCATCAAACATGACTGTCAGAAGCTCTGGGCTGCAGTCCTGGCTTTGTCACTGGGATGACCTGACTAATTCTGGCAAATCAGTTAGTCCTGTTGAGACTATTTCCTCGTCTACAGACCAGTGGAGACTACTAACTGTCCACTAAAACCCACTCCTCCCTCTGAGCATAGCCCTGGCCCACACTCCCCAGCCTCCCTTGCCCTCGGGTGTGCTCTTGTGTTAAGAGTCTCTGCAAGAGAATGTGAGCTGCAGTGGGAAAACCCTCTGTGAGGGTCGCCTGTCTTCTGGTACTTCTATGCTGGAGACAACCCGGCCATGGGTGGTGGCAAAGTCACATGGGGAAGGAGCCTGGATCCCCTAATCGCTGTCTGGAAAACTGCCCACCAACCTGGACTTTGGCCTGGTCTGTTAGGGGAACAAGAAATAAACTTTTACTGTAGCTG EMBV3_40095 CATCTGGACCCTGGAAGTTGATTCTCATTAATTGTCAGATTCCATTACCCTTCCCTCCTC Gene GeneID:537257|USP32:XM_002695643:77_cdna UTR3_Alt 2 NULL GeneID:537257 19 GENE USP32 NULL ubiquitin specific peptidase 32 EMBV3_16700 AGAGTCTGAATGGACTGATGTAGAAACAAGGTGCTCTGTGGCTGTGGAGATGAGAGCGGG Gene GeneID:515748|KIF23:NM_001098038:155_cdna Constitutive 0 NULL GeneID:515748 10 GENE KIF23 MGC148382 kinesin family member 23 EMBV3_27406 CCAAATTGGATCACTGTAGTGAATTATCTATGCTGGTACCTGTGAAAGTAAGCCCTGGGA Gene BVV0102_113903 + 0 NULL GK000006.2:62479432-62506124 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203368 TCONS_00203362 TCONS_00203363 TCONS_00203360 1 XLOC_124155 Coding TCONS_00203360 XLOC_124155 Coding Coding TMEM33 6:62298409-62484409 j TSS152347 6387 1 TCONS_00203360_1 230 0.0919054329105997 7 0.965698740315808 5.29581584788626e-07 0.000370155230001351 3.84947875118824e-05 7.14950875161987e-05 4.39130215806122e-10 3.85595423712445e-07 0.000169503481383662 2.77683724280073e-07 0.00034287115845523 0.000611429541483895 0.000351693046772262 0.000399198346376249 4.08776720504348e-08 0.000135928073449479 0.000108167926342383 0.00380551868853055 0.00759932180821437 0.00679872497958985 0.000252634926419122 0.000449857449308573 1.65515217238641e-24 0.00382215571098686 0.00337352849137128 0.00476399373235447 0.000103379782315897 0.000159595089423036 0.000274800645866487 0.000718881121856426 0.000400199951322888 0.00130655421461874 NM_001282452.1 TMEM33 Bos taurus transmembrane protein 33 (TMEM33), transcript variant 1, 0.0 1.086e+04 99.97 0.9430092375137 NM_018126.2 TMEM33 Homo sapiens transmembrane protein 33 (TMEM33), mRNA. 0.0 2230 80.62 0.363394394864569 TCONS_00203360_1 sp|P57088|TMM33_HUMAN TMM33_HUMAN Transmembrane protein 33; 7e-161 450 96.94 0.991304347826087 1 noncoding 0 0 0 0 -0.0371502851422295 0.857163046417021 0.0300039904306176 0.561441484986265 GGTGTCCATCCCGGCCATACAGGACTCGTAGGCAGAGGAATTGAGCAATTCATGATGGCCAATAAACTGGACACAGCAATGTGGCTTTCTCGCTTATTCACAGTTTACTGCTCTGCTTTGTTTGTTCTGCCTCTTCTTGGGTTGCATGAAGCAGCAAGCTTTTACCAACGTGCTCTGCTGGCAAATGCTCTCACTAGTGCTCTGAGGCTGCACCAAAGACTACCACACTTCCAGTTAAGCAGAGCGTTCCTGGCCCAGGCTTTGTTAGAGGACAGCTGCCACTACCTGTTGTATTCACTCATCTTTGTCAATTCCTACCCTGTTACAATGAGTATTTTCCCAGTCTTGTTATTTTCTTTGCTTCATGCTGCCACATACACAAAAAAGATCCTTGATGCAAAGGATTCAAATAGTTTACCTCTGCTGAGATCTCTCTTGGATAAATTAAGCGCTAATCAACAGAATATTCTGAAGTTCATTGCTTGTAATGAAATATTCTTGATGCCTGCTACAGTTTTTATGCTTTTCAGTGGTCAAGGAAGTTTGTTCCAGCCTTTTATATACTATAGATTCCTTACTCTTCGATACTCCTCTCGAAGAAATCCATATTGTCGGACCTTGTTTAATGAACTGAGGATTGTTGTTGAACATCTTATAATGAAACCTGCTTGCCCACTGTTTGTGAGAAGACTTTGTCTCCAGAGTATTGCCTTTATAAGCAGACTGGCACCAACAGTTGCATAGTGTAGCATCCAGCTAAATTATACATAATATAAATAAGCATTGTTAGCTGCTGGTACTTCTACTAGGGATGGATAATTCCAGGTGTAAAACTGACCTCAATGCAATTTACATAATTTACATAAATGCATCTCAAAAGAAAAGTAATCATTTTCCTGGCATGTTAAATCAAGCCTTTCAAACACTTTCTGAGAAACTTTATTGTGATGTGTTGTTAATAGTTAAGGAAATTTGAATCTTGTGATAAATGTATCAGGAATTCTTTAGATGCTGCTGTGCCTTTATCATGAAGTACATTTATTTGTCTGGTAAAAATAGCTCTAAACTTTGTTTTCATCTAATTGGTAACCTGAATTTACATCTGGCATGAGTTCATTATGATAATATTAACATGTAAATTCAGTATACTTTGAGACAGTATTCTTTTGCCATTCAGTAATTTTGGTTGATGGTTGTAACAAAAACACTTCCCTCCTTCTGTATTTAATTTCAAAGTGCTTTTATGTAGATTTTGTACTGCTTCATTAGGACAGATTTATTTTGGATTTCTTTATGTATCTTATACTATGACCTTCCAAAATTTTATTTTCATATTTACTTCTGTGGCTTTGGGTTTTTTTTTCTTACAGGCCCAACTGAAAGGTTGTTAACCAACTAGGTAAATACTTGTGGTCACCTAAGCATTTTACATCAGCGAGCAGTAGTCATACAGTTTTCCTCTCAGAGACAGGTTGAGTAACATTTCTCAAAAAGTAAATCCTTTTAGGATTGTGGATACAGTTACTTAGATCAGATTCTTGACTGCCAGTTCTCTCAGTTTCTTAGGCTTGAATTTTCATAGACAGTTGCACCAGTTCAGGTGCCCTTTGAAAGGAATGTAAGTGAAGATTGAGCTGTGACTGAACTTTGTATCTGTTCTGAAATAATAATGAAGATCATACATACCTACCTATCAAATTTCATATAAAAGATTAAATAGAAAGGTTTATAGGTGTTGGTTATTGATTGGGAATGGGGCCAGAGGAGTTGTGGGGGAAATAGTGTGCATTTCAGTCTTGTAATGCATGGATAAATTTAGAGGAATTGAATGTATTATGCAACTGTGATTTGAGTTGTTTAACATATGAAACACATTTGTTGAACTTCCATCAACTCCTTTTTAAAATTCATTCTGACCTTTATTTATTATTGCATGATTGGAAATGTTTAAAACATTGCAAAATGTTAATGCAGAGTAATGTAATGGTTTTTGTAACCAGTTTTCTTCTATGTGCATGTAATTTGGATTTCTCAAATACACTCAGTGACTTAGCAGTAACATCAGTTTTCTTTTTATTCTACTTTTTGGTCTATAGAAATGTGATACCTACTTGATAGCTCAACTGTAACCAGCTATTTTTGTAATTTTGTAATATTATCTACAAAGTTAGAGAAGCTTCATAACACACAGTCGATTGTTGGCGGCACTCTCATTGTCACTATGTGTGTAATCTGATGGTTTTAAAAACTGAATTTTCTAGAGCAATAAAGTAATTTAAGTAAACAATATATTATTTCTAATGATGTTTTTAAAAATTTGAATTATATCAAGAAATTATGGCAGCTGAAGGCATATTTATTTTTTAAGTTACTAAGTTTCTTTGTTTTCTACAATTTTTTAATCTTGAGATAATTTTAGATTTGTAGAAAAGTTGTAAAAAATAGTAGAGTTTCTTTATATCCTTTACTCAGCTTCCCCTTGTATTAACAGATTCCATAACTATAGAACATTTATCAGAACTAAGAAATTAACTGTGGGACAATATTACTAACTACTAAGATGTGGAACTTAAATTTCACCAGTTTTTCCATTTATTGATTTTCTTTCTGTGCTCTCTTTTAACCACGATTGTTTTTTTTAATGATCTGTGAAGTATGCCTGTTTTTATTTTGAAAATTATTATTGACCAAAAAGATTTTCCTAAAGGAAATAATTTAGGTGGGTTTTAACGAAAAGAATTTAACATTAATACTATTAAAATTGAAAATTCTCTGTGCTTCAGAAGTTGAGGCTTTCATCATATAATGGGATTATACTTCTGATATATTTTTTAAAGAAAAGTTTGGCTTGTAAATAAGCTGCCCGGGTGGCTTAGATGGTAACGAATCTGCCTGCAGTGCAGGAGACCCAAGTTCAGTCCCTGGGTCAGGAAGATCCCTTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAATATTTCTTGGACAGAAGGGCCTGGTGGGTTACAGTCCATGAGGTTGCAAAGAGTGGGACACAGCTGAGCAACTAACACTTTCACTTTCCTTTCACTAAACTCATAAAAAAATAAATCCTACAATTTGAGCATTGCCAGATGTTTAGTTTGCATGAACTTGTAGTTAGGAATTTTGCAGTATGAATATGTACAGACAGCTAATTTGACATCTGAAAGTACAGTGTAACTTTATGTCTATCAAGTTAAAATTAAAGAAATACAGGAACTTCCTTGGTGATCGAGTGGTTAAGACTCCACCAGTCCAGTGCAGAGTGTGTGAGTTCAAGCCCTGGTGAAGGAACTAAGATCTCACATGCCGCGAGGCCAAAAAAGTAAAATTGTATGTCTTGGATGTCATTTACACAATGCAAAATGTATAACAAAAAAGGAAATTATTATAATAGAGTATATAGAATGAGTATACTAGGAAAAGTTACAGCTGCTGAATTTATTTTAAATACAGCATAGCTGAATTTATTTTTATGTGTTTAAAAACAGTTGATTTAACATCTAGACTATCTGATTAGGAAGTTATATAGTGCTGCTGTTCTAGCACTTTTAAATATTAAACTTTCTTGGACAAGTGTAGGCCTCCTACAGAATCTACTTTATTCTAACAAAGATTGTGTATTCCTTTTGTGTACTTGATTCCTCATTTAATGTCAGTCCAAAGAGAAATTTCTTTAATAAAGTTTGAGATCAGAATGAATGAAACTAATTTTGAGGGATTGTGGTAAAGATCCTTATGTAATGCTAACAAATGTATTTTAATTAACATAGGTCTGAAGCTCCTCTCCACCCCCTACCCAAAGCCCTTTTTGATCTGCTAGCTTAATGCTTTCACCCAGATTGAGACTGATTTTTATTCTGTGGGGAAAACCTCAAGGGAGAAAGTAACCAGTTATGCTGATGAGCAGTAGGTGGCACTCTTTGCTCAAGTAGTCCCCACTGTTTATCATGCCATGTTGAAAGGTTAAATGCCACTAAATCCTGAGCCAGCCATAAAACTAAGGACCTGAATTCCATGATTCTATTTAATATGTAATTATTCAACATTCAGTAAATATTTAGTAAGCATTTACTCTTGAGTACATTTTTTAAATAAAAAACGTTCAGAAGCTGGAGTAAGTACCCTGTTAATATCTGCTTCCTAGGTAAATAGAATAGGCCACAGTTAGTGGTATTACTCAGATCATAGTCTCTCTGCTGTTTTTGTTTTTGTTTCCCTAAGTGCCTAAGTTACCTAAACATGTCAGTTATAAAATTGTTCTTTCACCTTCATTTTCAGGTATAGAGAAAATGGTACTTAATTTTTTTCAGGGTCGTTTTGTAGGTAAACAAGTTACAGCCAGTTCCATCTCTTAAAATTAAGACTTCACAGTAATACAAAAGCATGTCGATAATTTTGGATATTAGGAATGGTGCCTAGATTTGTAAATTCAGTTTGAGTTACAGAGACAGCTAATTTCATTTAACACCTCACTGAAATTTCTCTAGAATTAAGAGAATTCTGAGAGGCTATATGATGGCATAGTTCAATGGATTTAGTGTATACCAATGGCATATATGTTTTGTAAATCCAGGAGTTGTTTCCAGAAATTATTTTAATGAGCAGTCCTCTTCTAATACTCTAGGTGGAAAGTTGTATTTGGATCTGGTATTAAGGATAAGAAAGAAGCTGCTCAATGTTTGGGAAGTTTCCTGGTGGTAGTTACTCTGTGACATGTGTATCTTCTAAGCTGGTGTTCAGGAGGGTTCTTGGAAGGAACATATCTCTGTGTGAGGGATGAACTCTAGAGTAGTCTTTGTCCTCTTAGGCAGTGCAGATAGGAAAACTGACCTGCACTGAATAGGAGTTGATGTGACCACAGATAAAGTACAGTATTTTTTTAGTCTAAAACAGTTCCTTTTTCTTAGGAAATGATAGGAAAAAATTGTTGCTAGATAATCTTTGCTGGAATCTAAAAATTACCTTATATTCCAGGAGAAGGAAAGGCCCAAGAATCATTTTACTTTTTCCGTCATAGTTTTCTGAAGCTACTTTTAAAAAATACATATATGTGCTCAGTACTTTTGAACTAACTTCTTTTTTCCCTTGGTTCATAACAGTTTAAATTCCAAACTTTTGACTTTTTTTTTTTTGTAATTTTAAGATAAATGCTTTTGACATGAATTTTTGCTTACGTTTATGTTTGTAAGTTGAGACCAAATGGGCAACGTCTTAGGCAGGCAACATTTGTGATATGTATATATTGGAACAAACGTAAAAGGGCCACAGAGATTAGAGAGTCATAGAAAATGGCTTGATTATAATAAATGCATTGCTCTGGTGCTCTATATAATGGGATATATTGAACTAAATTTGTATATACAGTATGTCAGCATTTCTTAGTAACTTCTCTTGAATCCATTTTTAATATCTAATATTATACAGGTTGGGGAGTTATATACTCTTCAGGCCAATACTATCCAGACTATATAAATTTATAAAATAAATTGAAAAATTCATCATTACTGTGTATTCAAGACCAAAGCACATAAATGCTAATGTAGGGCTCAGAGGGGAAATATACTGCTCCTGAATATTTGAGAAAATGTGAAGTCCTTTCAAGAGAATCTAATAAACATAATAATCATAGCCTGCTGACACTAAGGAAAAAGGACCTCATTCACTCTTTCTTTTATGCAGTGATTTACTGGTCCCTACTGATTTCCAAATTGGATCACTGTAGTGAATTATCTATGCTGGTACCTGTGAAAGTAAGCCCTGGGATCCATATTTGTTTTGTGTTCTGCTTAAATCAGCAAGAATGATAAATTTGATGGTGTGAAATTGGAAGTGTCAAGGGCTTTCTCTGGTGATTGAGCAAAATAATGTCTCCACTTGTAATTTATTGTGACCCTTTTCCACTGTATGTGCTTTGTGTATCTCATATTTATTTCAATACAAATTAAATTGTTATTCTTCATCTGTATTGTTATATCTAAGATTTTATTGATGTAAAAATCAAATTGTGTAATAAAAAATCTCTCTGAATTTAAGCTGATTTGAAAATGTTATGTTGCAAAAAAACATTTACAATTAGAATTTAGTTTTCTATTGTGCTTCATTGCCTTATTGTTAGAATAAGGTGAATTTGAACTCTTCTGTTTTCTTCAGCTCATCACAAATAAGACTGGTATAATTTTGTGATCTAGTATGAAGCTGGATAAAAAATGTGGCCTAAGGTGAGACTAGAAAAAAAAGAAAAATTATAGTTGTATCTCTTAGCTATTGGCTTGCTTGCTCCCCTGTACTTTTTTATCTAGTGAAATTTACAGCCTAATGGATGAGTTATTTGTAACCCTAAAATGATTCACAATAT EMBV3_20198 GGTAAGATGCTTATCATCAGAGACTCTTTCCTCAGAGATTGACAATGCTGGCCAATTAAG Gene BVV0102_450742 - 1 EMBV3_11910 GK000009.2:45705641-45737451 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01105 GGCTTTAATACATAGGTCCTGCTTGGGTTCATTCCCAGATGATGTTGCTGCTCCAGAGAC Gene BVT0102_319191 + 0 NULL GK000006.2:94408907-94519711 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23960 GAGAGGGCTGTCGGCACTGGGCACTGACAGGACACGGGTGTCTGGTGGACGCAGACGGAC Variant GeneID:617176|MORN1:XM_002694124:471_cdna 264^374 1 EMBV3_35777 GeneID:617176 16 GENE MORN1 NULL MORN repeat containing 1 EMBV3_10761 GACACACTAGGCCAGGATCAGCATCACGTGGCTTCGCAGCTGTGTGTTCTCTGTTTTCAT Gene GeneID:534624|CLIP1:XM_002694485:340_cdna UTR3_Alt 3 NULL GeneID:534624 17 GENE CLIP1 NULL CAP-GLY domain containing linker protein 1 EMBV3_00186 GGGGTGGACTCGAGAGACGACAGCCACATCATGGGACCCTTTTTTAACAGACCTCATCAT Gene GeneID:515935|NAGPA:XM_002697955:659_cdna Constitutive 1 NULL GeneID:515935 25 GENE NAGPA NULL N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase EMBV3_04882 GTTCCCTTTATGAACAGTTTGATGGGGCGTCGGGCGGATGACAGCGGGAACAGTTGTGAT Gene GeneID:613476|LOC613476:XM_002694163:582_cdna Constitutive 0 NULL GeneID:613476 16 GENE LOC613476 NULL similar to Chromosome 1 open reading frame 76 EMBV3_09218 GGCTTGAGTCATTTTGCTGAATCCTCATCAGCACTAGGAAGTAGCATTGGTCAGGGGAGG Gene GeneID:788351|USPL1:XM_002691811:467_cdna UTR3_Alt 2 NULL GeneID:788351 12 GENE USPL1 NULL ubiquitin specific peptidase like 1 EMBV3_32489 GCAGATTGTTGATCCCTGTACTGTCCCCTCTCCATCCCACCCTGCCTTGATAGTAGCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21953 CTAACTGATGTCTACAATAAAATTCATATGGTAAACCAGATGTAGTGGTGAAAGAAGATG Variant GeneID:511082|ACAT1:NM_001046075:5_cdna 588^738 1 EMBV3_14156 GeneID:511082 15 GENE ACAT1 MGC137917 acetyl-Coenzyme A acetyltransferase 1 EMBV3_07708 TGGAATTGCAGCTGGAAGAAGGGGAGGGGCACCTGGTATTGCTGGTCACCCTGACAGCTT Gene BVT0102_250987 + 0 NULL GK000007.2:96605808-96682611 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218101 TCONS_00218082 TCONS_00218087 TCONS_00218098 TCONS_00218100 TCONS_00218097 TCONS_00218086 TCONS_00218088 TCONS_00218104 TCONS_00218103 TCONS_00218085 TCONS_00218090 TCONS_00218081 TCONS_00218099 TCONS_00218102 TCONS_00218083 TCONS_00218095 TCONS_00218089 TCONS_00218084 1 XLOC_131629 Coding TCONS_00218097 XLOC_131629 Coding Coding LOC100298968 7:96495754-96765651 j TSS162229 2352 1 TCONS_00218097_4 592 0.0633503401360544 17 0.991348519429706 0.00119326634947076 2.86275702705825e-07 0.00100108963429236 0.000408530863229065 0.000136639791275608 8.61125216094517e-05 0.000356523406289739 0.000522922322036378 0.00127714507833949 1.11092606925091e-59 4.46379797782122e-06 4.10458962494373e-138 0.000143592884119816 2.44028115337693e-24 4.46772759884958e-05 3.5569314054799e-05 0 2.51909195556294e-11 0.000342837390857636 0.000134347188065801 5.66306606499325e-32 1.39482559478683e-140 0 2.19916993967049e-17 0.00137994092667882 0.00128442407496695 1.53032292147067e-10 0 1.30098457265814e-17 1.44699811477655e-18 XM_002689394.3 LOC100298968 PREDICTED: Bos taurus multiple C2 and transmembrane domain-containing protein 1-like (LOC100298968), mRNA. 0.0 1225 100.00 0.288265306122449 XM_005272088.1 MCTP1 PREDICTED: Homo sapiens multiple C2 domains, transmembrane 1 (MCTP1), transcript variant X7, mRNA. 0.0 2448 90.63 0.724489795918367 TCONS_00218097_4 sp|Q6DN14|MCTP1_HUMAN MCTP1_HUMAN Multiple C2 and transmembrane domain-containing protein 1; 0.0 806 98.76 0.680743243243243 1 coding 1 1 1 1 -0.0681731922509373 0.5718021930233 -0.0305143193613635 0.622647707331253 CTCAGATCTCCTGCCCTTTGCTGACAGTGAAGAACATCGTGGAACTTAGCAGTTGTAATCTGTTACAACAACTCCTCTCCTCAGCTGAGGAAGCTCTGAATCGGGCCCTTCAGGCATTCAAAAATAAATACTGCTGGAACCAGTAATGCAGATGTCCCTTTGGCTGAGCCCGGAATGTACCAATTGGACATCACATTAAGACGGGGTCAAAGTTTAGCTGCCCGAGATCGAGGAGGGACAAGTGATCCATACGTGAAGTTTAAAATTGGAAGAAAAGAAGTTTTTAGAAGTAAAATAATACACAAGAACCTCAATCCTGTGTGGGAGGAGAAAGCTTGTCTTCTTGTTGATCATCTTAGGGAGCCATTATATATAAAGGTGTTTGACTATGACTTTGGACTGCAGGATGACTTTATGGGCTCAGCCTTTCTGGATCTCACACAATTGGAGTTAAACAGGCCCACGGATGTGACCTTAACACTGAAAGATCCCCATTATCCTGACCATGATCTTGGAATCATTTTGCTGTCAGTCATCCTTACCCCTAAAGAAGGAGAACATGTGTTTCAGACTCAAAGTTTACGTCTGTCAGATGTGCACAGAAAATCACACCTTTGGAGAGGAATCGTCAGCATCACATTGATTGAAGGGCGAGACCTCAAGGCGATGGATTCAAACGGGTTGAGTGACCCCTATGTGAAGTTCCGACTTGGGCATCAGAAGTACAAGAGCAAGATTATGCCCAAAACATTGAATCCTCAGTGGAGGGAACAATTTGATTTTCATCTCTATGAAGAAAGAGGCGGGATCATTGATATCACTGCCTGGGACAAAGACGCCGGGAAAAGGGACGACTTTATTGGCAGGTGCCAGATTGACCTGTCGGCTCTCAGTAGGGAGCAGACACACAAGCTGGAATTGCAGCTGGAAGAAGGGGAGGGGCACCTGGTATTGCTGGTCACCCTGACAGCTTCGGCCACTGTCAGCATCTCTGACCTCTCCGTCAACTCCCTGGAGGACCGGAAAGAACGCGAGGAAATATTGAAGCGATATAGCCCGTTGCGGATATTTCACAACCTGAAAGATGTGGGCTTCCTCCAGGTGAAAGTGATCCGAGCGGAAGGGTTGATGGCTGCTGACGTCACAGGTAAAAGTGACCCATTTTGTGTGGTTGAGCTGAACAACGATAGGCTGCTAACACATACTGTCTACAAAAATCTGAACCCTGAGTGGAACAAAGTCTTCACATTCAACATTAAAGATATCCATTCAGTTTTGGAAGTGACAGTTTATGATGAAGATCGGGATCGAAGTGCTGACTTTCTGGGCAAAGTTGCTATACCCTTGCTGTCTATTCAAAATGGTGAACAGAAAGCCTACGTCTTGAAAAACAAGCAGCTGACAGGGCCAACAAAGGGGGTCATCTATCTTGAAATAGATGTGATTTTTAATGCTGTGAAAGCCAGCTTACGAACATTAATACCCAAAGAACAGAAGTACATTGAAGAGGAAAACAGACTCTCTAAACAGCTGCTGCTAAGGAACTTTATCAGAACGAAACGTTGTGTTATGGTGCTCGTAAATGCTGCATACTATGTTAATAGTTGCTTTGACTGGGATTCACCCCCAAGGAGCCTCGCTGCTTTTGTGCTCTTTCTCTTTGTCGTCTGGAACTTTGAGCTCTACATGATACCACTGGTTTTGTTGTTACTACTGACATGGAACTACTTCTTGATAATATCAGGGAAAGATAACAGGCAACGTGATACAGTAGTGGAGGACATGTTGGAGGACGAGGAAGAAGAAGATGACAAAGATGACAAGCCTGCTGACCCACCTAGAGACGACAACCAGGCCACTTGGAATGCGATTCTGCACAGCCAGAGCCTGTTTGCTCCAGAATACACAGGGAAAGTGTCCTATGGGCCTGTCCAGCCCTCTTCGGCATGCTAGGTCTTGAGAAAGCAGACCGAGCTTTGGAAAAATGATGGCAACAATGTCTTTTACTCATTCATTGTCCTTCCAATCGGGAAGCCCAGATCCAATGTGGAAGCAAAGAACATGAATGTGAAGGGAAACCAAAGATTTTTAATGCCTCAAAAGTTGGTTCCGAGCAAAAATGTATAGAGCAACCATGCTTATTCTGGCCTTACTCTAAGAGTCACTAAGAGAGTATGATGCTGGAAGAATATGGGTCACTTGAGAAGCAGCTACTATCGTCAGTATTTTTCGATGAAAACCAAAACCTCTGAGACATAAAGTAACTCACTAAAGGTCACAAAAGAAGTGAAACAACCAAACTTCAAACTCTAGTCTGTTGCCTCAAAGCCTCCCCTTTTCTGCATAACAGCC EMBV3_14088 TGTGTATAACCTTCCAATGAAGCGTGTGATTGCCTGCCAGAAAGCTGCGCATGACTCCAG Gene GeneID:514919|WDR41:NM_001075690:6_cdna Constitutive 2 NULL GeneID:514919 10 GENE WDR41 MGC142930 WD repeat domain 41 EMBV3_10011 CTGAAGAATATGCCGGGTTTTGCAGAGGCATCGACAACTCCACCTTCTGATCCTCCTCCA Gene GeneID:507710|TMEM92:NM_001083651:65_cdna Constitutive 2 NULL GeneID:507710 19 GENE TMEM92 MGC148280 transmembrane protein 92 EMBV3_33376 AGTCTGGGCTTGTGGGGCTCCCTGCCCCCCTACAGAATGAGAAATAAGAGACTACATCTT Gene GeneID:100139452|LOC100139452:XM_002696190:196_cdna Constitutive 0 NULL GeneID:100139452 19 GENE LOC100139452 NULL similar to Ras-related protein Rab-37 EMBV3_11663 CAATGGCTTCGAGACAACCAGAAGTGCCTGAAACTAAAGCTCCAGAGTGGAGAGACAGCA Variant GeneID:508617|MGC127874:NM_001034325:224_cdna 401^831 4 EMBV3_39903 GeneID:508617 10 GENE MGC127874 NULL hypothetical LOC508617 EMBV3_21877 CAGTGAATCCGTGGATCATGCTGTTCTGGTAGTTGGCTATGGCTTTGAAGGAGCAGACTC Gene GeneID:515200|CTSL1:NM_001083686:15_cdna Constitutive 0 NULL GeneID:515200 8 GENE CTSL1 MGC157400 cathepsin L1 EMBV3_25600 CCTGACTGGTTCACAAGCTACCTAGAGACACATCCATCCTTAGGTTCGTGTCCCTCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32456 GGTGTGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACCGTGTCCCACAGGT Gene BVV0102_389890 - 1 EMBV3_23503 GK000018.2:48347628-48398053 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00010367 TCONS_00177279 TCONS_00031179 TCONS_00157937 TCONS_00240474 TCONS_00019989 TCONS_00022064 TCONS_00124121 TCONS_00160964 TCONS_00135549 TCONS_00250932 TCONS_00162457 TCONS_00166787 TCONS_00249014 TCONS_00199804 TCONS_00206484 TCONS_00238440 TCONS_00156739 TCONS_00152752 TCONS_00148277 TCONS_00006469 TCONS_00251704 TCONS_00023334 TCONS_00007362 TCONS_00152648 TCONS_00063138 TCONS_00209596 TCONS_00111547 TCONS_00207067 TCONS_00254568 TCONS_00031897 TCONS_00065822 TCONS_00252355 TCONS_00088291 TCONS_00233373 TCONS_00071184 TCONS_00160971 TCONS_00241273 TCONS_00023027 TCONS_00123172 TCONS_00253241 TCONS_00220656 TCONS_00123617 TCONS_00251853 TCONS_00165811 TCONS_00231277 TCONS_00070956 TCONS_00206863 TCONS_00087858 TCONS_00210178 TCONS_00017462 TCONS_00198662 TCONS_00055859 TCONS_00189807 TCONS_00056147 TCONS_00240690 TCONS_00190575 TCONS_00186814 TCONS_00251004 TCONS_00249913 TCONS_00250196 TCONS_00197973 TCONS_00032586 64 XLOC_131641 XLOC_005918 XLOC_107053 XLOC_017428 XLOC_096391 XLOC_147138 XLOC_010667 XLOC_012735 XLOC_075673 XLOC_097857 XLOC_081772 XLOC_153875 XLOC_099338 XLOC_101623 XLOC_151957 XLOC_121456 XLOC_125006 XLOC_145107 XLOC_095199 XLOC_092517 XLOC_090159 XLOC_002032 XLOC_154645 XLOC_014001 XLOC_002923 XLOC_092413 XLOC_037865 XLOC_128107 XLOC_067447 XLOC_125586 XLOC_157500 XLOC_018142 XLOC_040541 XLOC_155296 XLOC_053078 XLOC_142855 XLOC_042956 XLOC_097864 XLOC_147937 XLOC_013697 XLOC_074726 XLOC_156182 XLOC_133973 XLOC_075169 XLOC_154794 XLOC_100651 XLOC_140766 XLOC_042733 XLOC_125383 XLOC_052647 XLOC_128688 XLOC_009039 XLOC_120316 XLOC_033667 XLOC_115844 XLOC_033950 XLOC_147354 XLOC_116610 XLOC_112865 XLOC_153947 XLOC_152856 XLOC_153139 XLOC_119632 XLOC_018826 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_33429 CATGGTGGGATCCTTTTGTCTCTGTTACACACCCTACGCTGCCCTGGCCATGTATATAGT Gene GeneID:282294|OPN1SW:NM_174567:137_cdna Constitutive 0 NULL GeneID:282294 4 GENE OPN1SW BCP opsin 1 (cone pigments), short-wave-sensitive EMBV3_21663 TGCCCTAACGCTTACTATGTAAACCAGCGTTAACTTAACGTGTAGCCTTCCGTATAACTC Gene GeneID:100141158|USP48:XM_002685722:431_cdna Constitutive 0 NULL GeneID:100141158 2 GENE USP48 NULL ubiquitin specific peptidase 48 EMBV3_35979 TGATGTCTTCATCCGCCAGTATTTCACCGTCTTCGATAGGGGCAACAACCAGATCGGCCT Gene GeneID:414350|PGA5:NM_001001600:40_cdna Constitutive 1 NULL GeneID:414350 29 GENE PGA5 pga pepsinogen 5, group I (pepsinogen A) EMBV3_09604 TTCTCTGCTAGGCCTGAGAATCTGAGTTACATCTGAAGCCGAACTCCACCTCTTGTGCTT Gene GeneID:616210|TMBIM6:NM_001076414:119_cdna Constitutive 0 NULL GeneID:616210 5 GENE TMBIM6 TEGT transmembrane BAX inhibitor motif containing 6 EMBV3_41707 TTCCATTTCATACTCCAGGGGATCTTCACAACTCTGGAATCCGGCTCACCTCTCCTGTGT Gene BVV0102_031962 + 1 EMBV3_16428 GK000016.2:10061268-11057789 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30932 AATGGTGTGCATGTGCCGGAGGTGTCAGATTTGTGTGTCGGGTTACACAGAACGTATTCC Gene GeneID:508388|WSB2:NM_001075357:90_cdna Constitutive 3 NULL GeneID:508388 17 GENE WSB2 NULL WD repeat and SOCS box-containing 2 EMBV3_07638 GAGAACGGGAGGAGCCACGGAGAAAGTCAGGAAGAAGCTACGCAGGTGCACGGAGTCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12945 GCTGAGAAGAACACCATTTCCCATCGCTTCCGGGCCCTGCTTGCGTTGCAAGAATATTTT Gene GeneID:613653|ITPA:NM_001076282:1270_cdna Constitutive 5 NULL GeneID:613653 13 GENE ITPA MGC137583 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) EMBV3_15309 ATCCCAATTTGCATAGGGCAGGCCCAGGGGGGAGGAAAAAACATACAAAAGGAGAAGCCA Gene GeneID:100296410|LOC100296410:XM_002699278:195_cdna Constitutive 0 NULL GeneID:100296410 29 GENE LOC100296410 NULL hypothetical protein LOC100296410 EMBV3_07069 CAAGTTTGTTCCTGCCAGATAAATTCAGAAAAGTGACCAGTGGAACTCAAGGTGCCCTTC Gene GeneID:505379|VAMP3:NM_001045915:31_cdna Constitutive 2 NULL GeneID:505379 16 GENE VAMP3 MGC128311 vesicle-associated membrane protein 3 (cellubrevin) EMBV3_10074 GTCTGACAGCTACATCCTTTCCAGCTCTACCATCCAAACCCATGTGGTGATCATCTGTGG Gene GeneID:100337081|LOC100337081:XM_002688898:165_cdna Constitutive 0 NULL GeneID:100337081 7 GENE LOC100337081 NULL CD97 antigen-like EMBV3_23072 TGGAGCATTGCCTCAAACATGGGCTGAGAGTGAGTTCTATGAGCCTGAGGCATTAATGAT Variant GeneID:528153|RUFY1:XM_002688485:58_cdna 443^662 2 EMBV3_15917 GeneID:528153 7 GENE RUFY1 NULL RUN and FYVE domain containing 1 EMBV3_39669 CTGTGGAGTGGCTGAGATGAAGTCTGTTGTGGACTATAATGCGTATGCTGGTGTCTGGTC Gene GeneID:519708|YTHDF3:XM_002692694:106_cdna UTR3_Alt 2 NULL GeneID:519708 14 GENE YTHDF3 NULL YTH domain family, member 3 EMBV3_41380 ACCTTGAGTACCTTCCCCCAGAGCTGAGAAATGCCTGATCCTATCAACCCCACCTCTACT Gene GeneID:513780|POLM:NM_001035286:37_cdna Constitutive 1 NULL GeneID:513780 4 GENE POLM NULL polymerase (DNA directed), mu EMBV3_39730 GACAGAATCAACCTCCCTCGAAATATAGTTAGATTGGAGATATTGCTGGTGTTGCTGATG Variant GeneID:513231|GTF2B:NM_001046142:135_cdna 475^886 2 EMBV3_05878 GeneID:513231 3 GENE GTF2B MGC137096 general transcription factor IIB EMBV3_39745 CACCATGATTTCCACCTTGACCCGAAACTTGCTAACATTCTGTCCCCACGGCTCATTCGC Gene GeneID:100336675|LOC100336675:XM_002683751:2_cdna Constitutive 0 NULL GeneID:100336675 15 GENE LOC100336675 NULL Rho guanine nucleotide exchange factor (GEF) 17-like EMBV3_12225 ATCTACCTGGCACTACAACTGGCCTGCATCACCCTCACCAACTTCTCTCTGGGCTTCCTA Gene GeneID:513395|GPAA1:NM_001024529:83_cdna Constitutive 0 NULL GeneID:513395 14 GENE GPAA1 NULL glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) EMBV3_16047 GTCAGAGCCGCAGCCCTAGATCTGTGTGGATTTTACCCAGAGAAGGTGTGTTTCAAGGAA Gene GeneID:616326|LOC616326:XR_084012:470_cdna Constitutive 0 NULL GeneID:616326 21 PSEUDO LOC616326 NULL hypothetical LOC616326 EMBV3_20152 CATGGCCTTGAGCAACAAGGAGTCCCATGTGCCTTACCGGAACAGCAAGCTCACCTACCT Gene GeneID:510995|KIFC1:NM_001101936:107_cdna Constitutive 0 NULL GeneID:510995 23 GENE KIFC1 MGC179357 kinesin family member C1 EMBV3_29421 CCTCAGGAAGTCAATGTTAAGTCCACCATGCTCCTCAATTTGGCTGAATTTATGCTCCGG Gene BVV0102_383988 + 1 EMBV3_21495 GK000005.2:12817564-13756350 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190941 TCONS_00190944 TCONS_00190947 TCONS_00190953 TCONS_00190938 1 XLOC_116770 Coding TCONS_00190947 XLOC_116770 NonCoding Coding - 5:12773404-13272914 - TSS143180 1111 1 TCONS_00190947_1 55 0.32043204320432 5 0.997785825680819 0.00018359870310182 0.000207338571799765 1.04153026733499e-05 2.22567819598538e-05 1.06107747369925e-05 1.97514899311901e-34 0.000160077998903615 9.85850429800813e-236 0.000382229452442595 0 0 8.59135434773293e-29 2.01847468793023e-31 3.15260200992995e-14 5.29128544610967e-11 0 0 0 0.000468222897986648 1.88583183144058e-05 9.96924243863547e-05 0 1.1045975958468e-12 0 0.000487097141837406 7.5782769453599e-05 0.000242951091533436 0 0 0 XM_005227966.1 MDR/TAP PREDICTED: Bos taurus ATP-binding cassette, sub-family B (MDR/TAP), 3e-46 190 92.97 0.114311431143114 0 noncoding 1 1 1 1 0.0180675092755312 0.892911282421616 0.0055170108226709 0.934919069566811 TAGACCCAGCCCACTTCTGTAATACCCCTGCTTCTGTTTGCTGTGCTCCTTCTCTGCCTGCAGAGTTTTGATTCTAAGTCGGTATATCTCTGGCTCCTCCAGTTTGAAAGACTGCAGAAAATTCAGCTATGTCCTTCAGAGACCTTAGCTCAGCTCTTTGGTCTTCCTGCTTACATTACTTCAAAATAGGACCTGTTCCTTGAAGGACCTAGAAACGGCCCATGGTGTGGGAAAGCAGAAATGAGAGCTTCAGATGGAAAAAAAAAAAAAGAAGAAACTGACCCCATCACCTTCTCTACTGTGGCAGCCAGCCTGGAAGCAGGCCCACTTTGAAAATTCAAGACCTTATACTATAGACTTTTTAAAAAAAATTTACGTCTGCTTTCTTTTCCTCTTCAGACCTGAAGGTACCTGTTTCTGAGCCTAATGGTTTGGAATTTCTTTGTATTTTTATCTTCCGGATCAGTGGAAAGCTAAGCAAGAGGTGTGTATTAACCCCCTCCTCAGGAAGTCAATGTTAAGTCCACCATGCTCCTCAATTTGGCTGAATTTATGCTCCGGTTCTGAAGGGCTGAAGTTCTGCCAGGCTTCCTGCTAAGTGACCACAGCAGGCTCAGTTCCAAGGAGCAAGATGAAAGTACTGGAGCTGAAGGAGAATCCAGGCTTATCCAAGTTTACAAAGCTGCTTTGTACTATCAATAGGATTACAGTTATATATTTTGACATATAACTTGAAAATCGTTTTAGTATCCTTTGAAAACAGAAGTCTAATTCAACTCTAGTTTTGAAAAGCAAAACAGAATGCAGGTTATCCGTTCAAGCTATGACTTTCTAAAAAGTTCCAACAAGATCTCATTCATTTTCTCACAGAATAAGATTAAAAATTTGCAGTGAAAAAAGCCCAGATTGACAGATAATTTAATGAGAGAATGTTAAGGAAACTAACATACATTATAAAGCAGATTGAATTTATTAACTATCATATCACATCAGATCAGTCACTCAGTCATGTCCGACTCTTTGCGATCCCATGAACTGCAGCACGCCAGGCCTCCCTGTCCATCGCCAACTCCCGGAGTTCACTGAGACTCACGTCCATCAAATCAGTGAT TCONS_00190920 TCONS_00190921 TCONS_00190928 TCONS_00190929 TCONS_00190934 TCONS_00190936 s 3' 58907 TCONS_00190920 TCONS_00190921 TCONS_00190928 TCONS_00190929 TCONS_00190934 TCONS_00190936 s 3' 58907 EMBV3_04575 TCCGGAGGAGTTTCTCTGTGCCCCACCCAGTCTTAAGGGGCCAACAGCTGATTTAGATTT Gene GeneID:613741|MYOZ3:NM_001078039:82_cdna Constitutive 0 NULL GeneID:613741 7 GENE MYOZ3 NULL myozenin 3 EMBV3_06431 TTTGATACCCTGCTCCAGAGCCTGTTTGGGGACCTGAAGCCGCTGTTCAAGAGGTTCACT Gene GeneID:534871|TNFAIP2:XM_002683889:2_cdna Constitutive 0 NULL GeneID:534871 Un GENE TNFAIP2 NULL tumor necrosis factor, alpha-induced protein 2 EMBV3_23151 ATGTCAGGCCGCAAAACTGGCAAGAAAAAGCAGCCCAAGAAGCAAGCCAAGGAGATGGAC Gene GeneID:784207|LOC784207:XM_002688759:64_cdna Constitutive 0 NULL GeneID:784207 7 GENE LOC784207 NULL hypothetical LOC784207 EMBV3_09830 GTGCTATCTCAGGTCACTCTCCTTCTGAGGGTTTGCTTCATTATCCTGACCTTGACCTCC Gene GeneID:613658|TMEM195:XM_002686678:78_cdna Constitutive 0 NULL GeneID:613658 4 GENE TMEM195 NULL transmembrane protein 195 EMBV3_19727 ACCCTTGCCGGGCTGATTACAAAGTGTATTGATTTAGTCTGGGCTCATCCTACGCGTTCG Gene GeneID:100138671|LOC100138671:XM_002696974:145_cdna Constitutive 0 NULL GeneID:100138671 22 GENE LOC100138671 NULL hypothetical protein LOC100138671 EMBV3_31795 ATACCATTCTCCTCATCCTCGCCCAGGGTTTCTGCATCTCCACTACAAGCCCCTTCCTAA Gene GeneID:282483|SLC34A1:NM_001103223:5_cdna Constitutive 0 NULL GeneID:282483 7 GENE SLC34A1 MGC179494 solute carrier family 34 (sodium phosphate), member 1 EMBV3_28993 ACCATCTCATTCCAAGGCTAGTGGTGGGACATGGTGACCTTTCAGGGACACAGGAACTTG Gene BVV0102_366841 + 0 NULL GK000007.2:64242916-64286947 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24590 GTGACTGAACAACAAAGAGGGCAGGAATTTAGGGGAGCATCTCAGATAATTTTGACCAGA Gene BVT0102_049538 - 1 EMBV3_20716 GK000011.2:60942372-61117072 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25275 AGTGCGGGCCTTGTTCACCGAAACTTGGTCTCACCATGTCGTTCTTTCTCTTACCTTCTG Gene BVV0102_200948 + 0 NULL GK000015.2:71012800-71243138 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023551 TCONS_00104531 TCONS_00204180 TCONS_00011558 TCONS_00071514 TCONS_00134878 TCONS_00250272 TCONS_00138407 TCONS_00009395 TCONS_00019267 TCONS_00132405 TCONS_00010745 TCONS_00138406 TCONS_00018727 TCONS_00226782 TCONS_00148378 TCONS_00206254 TCONS_00186861 TCONS_00196654 TCONS_00189837 TCONS_00118519 TCONS_00135618 TCONS_00220133 TCONS_00197812 TCONS_00025023 TCONS_00151311 TCONS_00058128 TCONS_00167486 TCONS_00165861 TCONS_00081870 TCONS_00248780 TCONS_00186919 TCONS_00220245 TCONS_00056822 TCONS_00134877 TCONS_00021459 TCONS_00046799 TCONS_00242190 TCONS_00206255 TCONS_00071373 TCONS_00160954 TCONS_00091564 TCONS_00166135 TCONS_00057018 TCONS_00025022 TCONS_00243110 TCONS_00057884 TCONS_00002708 TCONS_00198834 TCONS_00065051 TCONS_00087961 TCONS_00235856 TCONS_00037742 TCONS_00177102 TCONS_00104532 TCONS_00005951 TCONS_00252994 TCONS_00134876 TCONS_00218367 TCONS_00171864 TCONS_00100335 TCONS_00202228 57 XLOC_014218 XLOC_062403 XLOC_124364 XLOC_007109 XLOC_043285 XLOC_081568 XLOC_153215 XLOC_084615 XLOC_004951 XLOC_009947 XLOC_080770 XLOC_006296 XLOC_084614 XLOC_009409 XLOC_138080 XLOC_090260 XLOC_124865 XLOC_112912 XLOC_118400 XLOC_115874 XLOC_072652 XLOC_081841 XLOC_133450 XLOC_119473 XLOC_014641 XLOC_092080 XLOC_035925 XLOC_102322 XLOC_100701 XLOC_050747 XLOC_151723 XLOC_112967 XLOC_133562 XLOC_034625 XLOC_012132 XLOC_026938 XLOC_148854 XLOC_043144 XLOC_097847 XLOC_056338 XLOC_100973 XLOC_034820 XLOC_149773 XLOC_035681 XLOC_000664 XLOC_120487 XLOC_039775 XLOC_052749 XLOC_144309 XLOC_021571 XLOC_106876 XLOC_001514 XLOC_155935 XLOC_131688 XLOC_103929 XLOC_060578 XLOC_123873 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_12299 GTGAATGGGGCACTGTGCTGAGCACCAGTAAGCATGCTATAGATGACTAAAAACTTGAGC Gene BVV0102_037732 + 1 EMBV3_09759 GK000006.2:69608372-69768725 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06437 ATAGATTTATTGCTTTTAGTTGACTTTTTTTTTTTATATTTTGTTCAATAGTGTGTTCTG Gene GeneID:280961|ZFX:NM_177490:2_cdna Constitutive 2 NULL GeneID:280961 X GENE ZFX NULL zinc finger protein, X-linked EMBV3_40778 GCGACACCTGGAATCATGGTGCATCCACAGGTTCCCGAGTGGTGCTTAGATGACTGGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17021 CATAACCTGTTCTGGGGTCTTTATTTTCTGCTTTTAGCTGCTCAGGCCCTAATTACCGGG Gene GeneID:522692|GP5:XM_002684858:237_cdna Constitutive 0 NULL GeneID:522692 1 GENE GP5 NULL glycoprotein V (platelet) EMBV3_25623 TCTCAGTCATCCAGAGATGTATCCTCCAGTCGCCAGGTTCGCACCAAAGTCGTGGATGTA Gene GeneID:404111|KRT14:NM_001166575:55_cdna Constitutive 0 NULL GeneID:404111 19 GENE KRT14 NULL keratin 14 EMBV3_11173 CTCCGGCTCCTAGCCCTCTGGTTATCTGCTCCCATGCACTGTTTTGATGCCAAGTGAATT Gene GeneID:515469|FRMD8:NM_001098985:15_cdna Constitutive 0 NULL GeneID:515469 29 GENE FRMD8 MGC157109 FERM domain containing 8 EMBV3_29233 CAGCTCTCCGCGCCCTCTCATGGGAAAGCCATCAGTTTAGGTGAAGCGTGGTGTTTAAAA Gene GeneID:513389|DGKH:NM_001035282:23_cdna Constitutive 0 NULL GeneID:513389 3 GENE DGKH MGC128923 diacylglycerol kinase, eta EMBV3_15549 TAAAATAAGTGGGGTGTATTGTCAGGGAGGGGATGATGGAAGGCAGGAGAAATCCACTTG Gene GeneID:100335582|LOC100335582:XM_002688977:7_cdna Constitutive 0 NULL GeneID:100335582 7 GENE LOC100335582 NULL CG9147-like EMBV3_37280 AACCACTGGGCTGTCGGACACTTAATGGGAAAAAAGAGTGTGGCAGAGTCCCCACAACTT Gene GeneID:615323|GRP:NM_001101239:188_cdna Constitutive 0 NULL GeneID:615323 24 GENE GRP NULL gastrin-releasing peptide EMBV3_15630 GAAGACTTCGCCGCTCGGGGCCGCAGCCTGTTGGGGAAGGCGGGCATCATGGCCTCGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24955 CAGCTCTGAAGCATCTCCCAGGTATCTTGCACAGAGTTTGGTGCCTACAGAACTAAGCTC Gene BVV0102_442311 + 0 NULL GK000003.2:90127207-90185368 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179034 1 XLOC_108807 NonCoding TCONS_00179034 XLOC_108807 NonCoding NonCoding - 3:90183268-90183905 - TSS133793 637 1 TCONS_00179034_1 57 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4.50436323018875e-06 0.000118153912954203 0 0 0 0 0 0 0 0 0.000417657605545162 2.63181172288123e-05 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0611774475798344 0.603558321448779 0.0816486839167426 0.210406245551943 AGGAGGGAAAAATCAGAGAGGGCTGCTGAAGTCTCAGGGGCTTGCTTTTACTTTTCATCTGGGATTCCAAAGACGTAGTTTGGTGACTTCGAACTTCAAGGACGATCGTCTTAACAAGGAGCGTGGGGTGGGCAAGGGTAGATACCAGAATCCCAGAGTTCCTTTGAGAATGTCAGTAATGGGGAATTGGACTTGTAATTGTTGTAATCGGCCTTGTATTGTTTCTGCTATTTTAACATGTCAGGAAGAAGTATTTCTCACTGTAAAGGTGTCTAAGGGATCGGTTCTCTTAATCTCCCTGACTTTTCCTTGCTGCTATTTGAATGGAGAATGCTGGGTCTAATCTGTATCTAGATACCGCAGCTCCAAAATTGTCTTGGAGATTCAATTACTCTCTCTTTCCGAAGACAGCGATTTTGCCTCTCTTTGCCCACTGATTGCTATGCCATCTAGACTTGAGCTTAGTTCTGTAGGCACCAAACTCTGTGCAAGATACCTGGGAGATGCTTCAGAGCTGATGATCTACAGAGGGCACTAGTCTTTACTAACTATAGCACGAAATCAGATTGTGATAAATGCTACAAGAGTAAAGTGTTGAAGGGGAAGTTAATTCTATCCAGGGGTCAAGGAAGGGCTC TCONS_00170601 . 5' 1443 TCONS_00170601 . 5' 1443 EMBV3_32571 ATACTCCTTCCAGCTGCCAGAGCAGTACAGAGAGATGAGTATGAAAAGAGAAGGTTATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11876 GCAGCTGCTGCCCACAGCTCCAGGTCCTGGAGGTGCTGCGGCTGTTGAACCTGATGTGGC Variant GeneID:512690|FBXL6:XM_002692543:160_cdna 907^987 2 EMBV3_22247 GeneID:512690 14 GENE FBXL6 NULL F-box and leucine-rich repeat protein 6 EMBV3_38936 AACCTTGCTGAGAAGCTGGGGAAGGAGTGGTTAAAGATTGCTATTGCCAACCTGAAGCTG Gene GeneID:511229|LOC511229:XM_002684982:77_cdna UTR3_Alt 2 NULL GeneID:511229 1 GENE LOC511229 NULL similar to mCG142710 EMBV3_24549 CTGAACTGGGCAAGATTTGGCTGAGTTATCCTTGGGCAAATGTCTTTATACCTCTGAGCC Gene BVV0102_267330 + 1 EMBV3_38674 GK000003.2:99957409-99996595 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11393 CCAGGAGTTTGCTCCAGAGGTTTGCTAGGCAAGGACTGGGGTTAGGGTAGTTGTACTGAA Gene BVT0102_082456 + 0 NULL GK000009.2:39924417-39956473 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28015 TGCGTTGAGTCCTAGCCTTAGTCCAAGCCTTTCATGTTCTGCCCCTCTGAAAAGCTGCTT Gene GeneID:613633|LOC613633:XR_084606:348_cdna Constitutive 0 NULL GeneID:613633 18 PSEUDO LOC613633 NULL similar to sprouty-related, EVH1 domain containing 3 EMBV3_39201 CAGGACCCCTTCATGAGGCTGGTATTGGGAAGGAAATCAACACTGCCTTATAGGCTAACC Gene BVT0102_151498 - 0 NULL GK000020.2:8595657-8650337 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114395 TCONS_00114392 TCONS_00114393 TCONS_00114394 TCONS_00114397 TCONS_00114396 1 XLOC_069284 Coding TCONS_00114393 XLOC_069284 Coding Coding TNPO1 20:8643230-8695550 j TSS85346 9973 1 TCONS_00114393_1 514 0.0107289682141783 24 0.809839637607752 0.00109840569811044 0.000982473761954047 0.000313100963270447 0.000401899822970083 0.00104677585143491 0.000364529903848168 0.000517151980251684 3.42212369112579e-06 0.00155236353301277 0.000934132309345784 0.000396963144409161 0.000533919448116511 1.57913229028254e-08 2.17176406927938e-10 8.91832935995369e-07 0.00776719185208798 0.00698382740514999 0.00883552776029723 4.30188594461604e-07 3.26814581447085e-07 1.86017221701671e-10 0.00456889166666517 0.00433470444256669 0.00636780727727177 4.22619796263414e-07 7.69302993158871e-08 9.67203535169358e-08 0.00111925870865816 0.00074075223977706 0.00179383083270324 NM_001076540.1 TNPO1 Bos taurus transportin 1 (TNPO1), mRNA. 0.0 5003 98.88 0.284668605234132 NM_002270.3 TNPO1 Homo sapiens transportin 1 (TNPO1), transcript variant 1, mRNA. 0.0 1.091e+04 89.34 0.826431364684649 TCONS_00114393_1 sp|Q3SYU7|TNPO1_BOVIN TNPO1_BOVIN Transportin-1; 0.0 1035 99.61 0.986381322957198 9 coding 0 0 0 0 0.253192890971221 0.338053881568632 -0.0346925687457631 0.495122624854008 AGGATGGAAACCTGCACGTGTGTGTCACTGAAACTGGAACAACTCAATCAATATCCAGACTTTAACAACTACCTGATTTTTGTTCTTACAAAATTGAAATCTGAAGATGAACCCACAAGATCATTGAGTGGTCTCATTTTGAAGAATAATGTGAAAGCACACTTTCAGAACTTCCCAAATGGTGTAACAGACTTTATTAAGAGTGAATGTTTAAACAATATTGGTGACTCCTCTCCTCTGATTAGAGCTACTGTAGGTATTTTGATCACAACTATAGCCTCCAAGGGAGAATTGCAGAATTGGCCTGACCTCTTACCAAAACTCTGCAGCCTGTTGGATTCTGAAGATTACAACACTTGTGAGGGAGCATTTGGCGCCCTTCAGAAAATTTGTGAAGATTCTGCTGAGATTTTAGATAGTGATGTTTTAGATCGTCCTCTCAACATCATGATTCCCAAATTTTTACAGTTCTTCAAGCACAGTAGTCCAAAAATAAGGTCTCATGCTGTTGCATGTGTCAATCAGTTTATCATCAGTAGAACTCAAGCTCTGATGTTGCACATTGATTCCTTTATTGAGAATCTCTTCGCCTTGGCTGGTGATGAAGAACCAGAGGTACGGAAAAATGTGTGCCGGGCACTTGTGATGTTGCTTGAAGTTCGGATGGATCGCCTGCTTCCTCACATGCATAATATAGTTGAGTACATGCTACAGAGGACCCAAGATCAAGATGAAAATGTGGCTTTAGAAGCCTGCGAATTTTGGCTCACTTTGGCTGAGCAGCCAATATGCAAAGATGTACTCATAAGGCATCTTCCCAAGTTGATCCCTGTGTTAGTGAATGGCATGAAGTATTCAGATATAGATATTATCCTACTTAAGGGTGATGTTGAAGAAGATGAAACAATTCCTGATAGTGAGCAAGATATAAGGCCACGGTTTCATCGATCAAGGACAGTGGCTCAGCAGCATGATGAAGATGGAATTGAAGAGGAGGAGGACGACGACGATGAAATTGATGATGATGACACGATTTCTGACTGGAATCTAAGAAAATGTTCTGCAGCCGCCCTAGATGTTCTTGCTAATGTATATCGTGATGAACTTTTGCCACATATTTTGCCCCTTTTGAAAGAATTACTTTTTCATCATGAATGGGTTGTTAAAGAATCAGGCATCTTGGTTTTAGGAGCAATTGCTGAAGGTTGCATGCAAGGCATGATTCCATACCTACCTGAGCTCATTCCTCACCTTATTCAGTGCCTCTCTGATAAAAAGGCTCTTGTGCGTTCCATAACGTGCTGGACTCTTAGCCGCTATGCACACTGGGTAGTCAGCCAGCCCCCAGACACGTACCTGAAGCCATTAATGACAGAACTGCTAAAACGTATCCTGGATAGCAACAAGAGAGTACAAGAAGCTGCCTGCAGTGCCTTTGCTACCCTTGAAGAGGAGGCTTGTACAGAACTTGTTCCTTACCTTGCTTATATACTTGATACCTTGGTCTTTGCATTTAGTAAATACCAGCATAAGAACTTGCTCATATGATAGTGGAGCTTTCTGTGTTTTTCATCACTGTAATTTAGGAATATATCCAGATGCTAATGCCTCCACTGATCCAGAAATGGAACATGTTAAAGGATGAAGATAAAGATCTCTTCCCTTTACTTGAGTGCCTGTCTTCAGTCGCCACGGCCCTGCAGTCTGGCTTTCTTCCGTACTGTGAACCTGTGTACCAGCGCTGCGTGAACCTAGTGCAGAAAACTCTTGCACAAGCCATGCTGAACAATGCTCAACCGGATCAATATGAGGCTCCAGATAAAGATTTTATGATAGTGGCCCTTGATTTACTCAGTGGCCTGGCTGAAGGACTTGGAGGCAACATTGAACAGCTGGTAGCACGAAGTAACATTCTAACACTAATGTATCAGTGCATGCAGGATAAAATGCCAGAGGTTCGACAGAGTTCCTTCGCCCTGCTAGGTGACCTGACAAAAGCTTGCTTTCAGCATGTTAAACCTTGTATAGCTGATTTCATGCCAATATTGGGAACCAACCTCAATCCAGAATTCATTTCAGTCTGCAATAATGCCACATGGGCAATTGGAGAGATCTCCATTCAAATGGGTATAGAGATGCAGCCTTACATTCCTATGGTGTTGCACCAGCTTGTAGAAATCATTAACAGACCCAACACACCAAAGACGTTGTTAGAGAATACAGCAATAACAATTGGTCGTCTTGGTTACGTTTGTCCTCAAGAGGTGGCCCCCATGCTACAGCAGTTTATAAGACCCTGGTGCACCTCTCTGAGAAACATAAGGGACAATGAGGAAAAGGATTCAGCATTTCGTGGGATTTGTACCATGATCAGTGTGAATCCCAGTGGAGTAATCCAAGATTTTATATTTTTTTGTGATGCTGTTGCATCATGGATTAATCCAAAAGATGATCTGAGAGACATGTTCTGTAAGATCCTTCATGGATTTAAAAATCAAGTTGGAGATGAAAATTGGAGGCGTTTCTCTGACCAGTTTCCGCTTCCCTTAAAAGAGCGTCTTGCAGCTTTTTATGGTGTTTAATCTCATATACTTAAGCTGCAGTCCCAAAATTAGGGGTCCTTCAGTCTTGGAGACTATGAGGGAGCCTCTGCACCCAGGGAAAATGTTACCCTTTACAGGGGGGAAGGGTAAACCAGTAGGGAATACAGTACAATCCCAACCCTACTGGGAGGGGCGGGAGGGAGGTGTTGCCGTCACTGTATTAAGTCGATGTTGGGAAACGTTTTAACATCTGGAGCCTTTGTGGGTGGAAATCTATCTCCAATTACAACTCTGCACTGGATGTGAAGAAGCAAAAAAAAAAACAAACCTATCTACTCACAAAACAGTACATTCTGGAATATTATGGGGAATTGTACCAAAACAAGAACCATATAAATGATGCATAGGGATAAGAAAGAAGAAAAATCCTATAGCGCACAATAAAGGAAACCTAAGAATGGGGATTAGAAACAGTAAAGGGTTTTGGTTTTGTTTTTGTTTTTTTAATTTAAAAGGTTTTATAAAATTTCCCACATGATGGGGCCTTGTTTTTTGCATGCTGATAAAGAACTACACAAATGAAAGCTAATAGAGTTAAAATCAGCTTGCCTACCCATAGTAGAAGCAGGTTCTTGGAAGTTACAGTTTAAGGTACCCCAAAAAGTTGGAAATAAAACAAAACAAATTTAAACAATGAAGCACCCTGTGAAATGCCAAATGAGTCACTCCTTTTACCTTTGTGGGGTGGGCAGGGAGGGAGGAATAAATGGGGCTGGACATATCGAACTAAAGATTGACATCTTGATTTTTCATTAAGACATTAACGTAGTGGATATAATTTGATGGTTGTACATCATTAGATTTAATTTCTAGGCCAAGATATTGTTCTTTTTAAAGTGCAGTTTAAGGTTCAGGCATGCGTTCTGGCTCATAGTGATTGAAAGTACTTTAAATTAGTGGGAAAGTAGCATGCTTGCATCACATAGAGTGAGATTGGTATTCAGTTACCTCTGTTGCGCCAGTTTGTGTTGCAGTTTACCGATTCAATATAGCCCTGCATTTAAAATTCCTTTTTAAGATTTGTGAATTTTATTTTTATTAAGAATATAGATATAAAGTACTGTAGTTTACAGCTAGGCCTTGAAATAATCTTCTTAGGATCTGTTAGGAATAAGATTGGTATTGTATCGCGTGTAACCTGCACAATGTGGAAAGCTGATATACCTGTGCAAAATCTTTGCCTCTGTGCTGTCAGTGTGGTGTGCTTTCTGCATGGTTATATACTACTAGTGATTTTATCAAAACTTCTCTAAAACTTAAATTACATGGTAAAAGATCTGTAAGAGGCTGCATAAATGTTAGTTGGCACATAAAGACAATTGTAGAAGTTGAAGACATGATTGCTATATTTCAATGTTTATTCCCACTCAACATATTGCCTTCTAAGCTTTCTTTTTTTGTTCAAAGCATGATCTTAAAGATATGTTTAAGTTAATGGGTGTAATGCAGGGTTCCTACACTGTATTGGCGCATGTTGGTGGCCCTCAGTGCCCTAGACACATGCACACGGGGTGCAAGTAAAAAGCTACAGAGTGAAAGTGGGTTTGGATCCTCTTCATTTCATTTGTTTAGCTTTTCTGTTGTTTTTCTCTACTTACATGTATTCCTGTGAATAAATCCTTGTTAAGTTAACCCTTTACTTTTCCTTCCATGTGTATTTTCTTATATACTGTGAATGTGAAAACCTAACTGGTACACTTGATCTTGTGTCCATATGGAAGTGCAAGTCTTTATTAATTTGGATTGCCTGAACAGTGTATCCCATGATGATGAAGGAAAATGGAGAGATTTTTCTTTTTAACTCTGCTGGTCAGAGATGAAGCCACACCTTTCCATTTTTCAATGCTGCATATTTAATCTGCAACAGAAATGTTAAGCCATAACAGCCTTTTTATATTTTAGTTTGTCACCTTTGCATTGCAGAATAAATACTGAATAACCATTTTTGTAAGCAGTTGCTCCTCTTTGCATGGTTCTATTCCTCTAGAGGTGTTGAATGATACAGCCATTGCACTGAAGTTTGAGCTGTATGCGTGTGAATTTATAAATACTGTTTCAAAAAAATTCAAATGCATGGTAGCATGCAGAAAGGGTTTTGTTGTGTGTGTGTGTGTATGTATTTTTTTTAACATGTTCTTTCACCTTCCTTTCTCTACTTTGGCTTTGCAAATTTCAGTCTGTAGAGCCTGAAATTAAATCATATTTTTAGTGTCCAGTTGTTTTTAATCGTAAGTTGGATCCAAAGGGTATGTAGCATTTTGCTTTCTAGTACCATTGCCTCATTGGGAGCTCAAAATGTGCTTCCTAGTTAGTGTTTAAAAAGCTGATTAGGGTAGCTGTTTTATCCTCAACTTCTAGTGATCTGTAGTTCTCCAAAACTTTTTAATATGGGAGATATTTTAATATTCTGGAATAAATAGTGAAGATTTTAAATTGAGAGAAAAGACAAAATTCTCAAGAACTCTTTTAAAACATACAGTCTTCAATAAAGTTATCTGGATCTGTGATTGACAATTCTGTATTGACTGAAAAGCATTACTGTTACCTAATTGAGTAGAAAAATTAATTTCTAATTATATATGTAACAAGCCGTGCCCCTTTTTTGTAGTCCATGTGTTTTTAAATTAAAAGGAAATTTAATTTAAAAATACAACATATAAATAAATAGACTGCAACCTGAGATGGGGTTGGGTTTTGGGGTTCCCCCCCCCCTTGAGGTTATAGTTTCTTCCTAATTGTATTTCAGATACATAGTATAACATAGGAATTTGCAGAAGCCATTTAAGTTTAAGTTATCTTTTGAGGTAAGCTCTGATTTAGCATTTATTCTGATAAAACTTAATACATCATGGGATATATATATATATATAAAGCAACTTAATTCTTGTGGTGTAGTCTTAATAGTTTTGAATGTTGACTGAATGTCTATGAAATTGTGAGTTTGTCTTTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTTACTTCATCTGCTCCTTACACACTAAAGTGCTGTTAGTGTGCTCAACTACAGAAATAGCCGCTGCTAAGTGATGTAGATTTTCTACTTGAATATTTTTATGTTGTAGGAACCTCAGGAGGTCAGTGTTTACTGTTTTATATGCCTTCTTTTTCCTGTTTGAGCTTCTCTCTTTGAAGGATTCTAACAGAACAAAAGCTGCTGATCAACCTAAGTTGGAAACAGAAAGTGTATTTAATATAGTTTAAATGCATGTTTGCCAGTTCCATGTTACAGTCCATTAGTAAGTGAACTTAGTGCCACAGATATTCATTTATTCAGGAAAGAACTTTGCTTTTTGTATTGTCTAATCTCTTTAATAACTTCATACTGTGTAAAAAAAAAAATCACACTTTTTTATATTTTTTGGTTGGTTATTTTCCAAATAATCAACATGTAAATAATCTTTAAGAGCCAGTTCTGATGCTTTACATTATTGCTACTTGATTTTGTGACGCAAGTTAGATTTCAGAAGAATAGATTTTAAAACACTTAACCAAGCCATTACATCTTAAAAACAAAATAAGTAGCATACATTTTGTAATTAACATATTGATAAACACTGTGATTTTTTTTGTTAAGACTTTTTCATTGATCTGAATTGCTTAAATTGCATATATTGTAAAATAGGATCAGATGTATATTTTAAAATAATCTCAACTGACTTTCCTCTATTGAAATGCTTTGTCTACTCAGTTATAAAATATTCAGATACAAGTTTTATCTCAGGTGAATACTCTTGTATCCTTCTTTCTTTGGTGACATATGCTTATAAAGGGTCATCATACTTAACATTCTTTGGTTTTGTTTTTTTAGTGTATTTCATGAAGAATCTTTCCATTTAGTCTGATTTTGTAATTCTTAGTCTAGCAGACCATGGCGGTATAAGTCCTTACTGGCGAGCCCTTTGGCATGCAGGCTTACCTTGAAAGGGAATTCAGTCTGGTTCTCCTTTTCTCCAAACTCTTTTTAAGATAGTAGAGTGGAAAATTTTCTGTCGTGTATTAAATTACCCTGCATATAGCTGAAATGCCAGAACTAAACTAATTATGTCTTAAATCTTTTAGTCTAAATTTAACTTAAATCCTTTGCCATAAAGAAAAAAGTAGGTTTGTTTGCTCCATATAGTTCATCTATATTATTCATATTGAATGTATTAACAGATAACGGTGCAAAAACATTCTTCCCAAGAGAAGAGTGTATCATGCATAACTGCAATTTAAATCCTTTCTTTAGTAGCCCTTTAAACTACACACAGCTTTGCTTATTGAATTATTTTTGCAAATAATACAAGGGGGAAAACACTTAACTGTCACTACTAGTACTGTTACTGCAATGTAGGCATTGAAATCTTGATGCAAACTATGGTCTTCAGGTTAAGGGCCTAAAATAATCTAGAATAAAAGTCAGATCAATAAAGAACTGTTTAACAATATTATCTAGTAATACCATGCAAATGCATTATATTAGTACTTAGTCATACTGTATTAGAGATGTTTCTAATGTCTCTTAAAAATTGTTTTATTTAAAATTTTCTCACTTGTACACTTTGCAGGTGACTTGTGACTAATTTTTTCAGTCTTACATAGATCTTCCCCCATTAGTATTATATATGAGGGATTCTTTATCTTTATGCCTAATTATTATGCTTATTAATTTTAAGATACACATGTTTATTGTGATTTGTATCCCAGAATGTATTGTTTTTATTTTTTTTAGTGTGTGCATGATTTTGAGGGAAGTTAAAGTGGTGATTGTTTTTTTCACCTCTTGTACATTTTAAAATCAAACCAAATCTATTTGCCAAGCATTATATCACTAACTAAGAAGATAGGATTTTTCCCTTTTATTACTATTTTTGTTCATCTACCGTAGAATCCCCTTAAAGATGGCTTGGTATGTTTCACAATTAGCTATTTTGCAAGTCCAGTTATCTTCTAAAAGCTTACTATGATATGGTTAGCCTATAAGGCAGTGTTGATTTCCTTCCCAATACCAGCCTCATAAAGGGGTCCTGCTGTTCTTTCCCCATATTGCCTCATTGTTCCTCTGTGGATATATAACCAAATTAAGATTGGATGAGTTTTATGGAGATAATAATAAGACAATACTGTATAAGTAATTTTGCTTAATAGATTATCATCTGTGAGAAGATGTTTAAACGTGGTTAATGACTTCATATTATAAAAGTTTTACACTTAATATTCATGTTAATATTGGGTGCAATAATTTAGTAGTTATAGCTTTAGTTATAAATAACTGGATCTTTCTGCTGACAACTTAGGTTGTATGAGTTACGCTTAAAAGCTTTAAATCTGATGTTTCTTGTACCTGCCACACTATGTTAGAATGTGTCCTTCAAACATATCCTCCTGCAACTTCTCAAACTGTACTAAATTGATATTTCTTGAAGTCAAACTCTGTGCTAACAGATCTTCATTTTAAATAGAATACGGTTTTAATTTTTGATAAGCTGCTGAATTTTAAAGAGAGTTTTTTGGGGCCACCAAATATTTTGGATCATGCAGAGAATATATATTGTACTGTAGTAATTTTGTATTTACATTTGTATGATGTGACATAATAGATGTGAATGTTAATCACTGCTTGACTATGTTAATAAAGTTGTTTAACTATAGATGTTTCACTCTGATTTTTAATGACAGGAAACAAGCTTTCTTCCCCCACTCCTCCCCCCATTTTGGGTCCAGATAGGTCTTGTGTTCCTTGGTTTTTGTTTTGAGGGGCCTGTTTTTTAGCTTACACTTCAGTACACTCTTGTTTGACACCATGTATTTTTTAAAATTGAGTATTAGTTGTGTAGTTAAAAAAAAAACCTATTTTCCCTACATTTAACTTCTGTTATTGATGTATTTCTACAGAGTTGATTCTAGGTTCAGCTTCCAGTGGGGGAGGAAGAAAAGATGATGCTCTGCAAAAAAAAGAAATTAAACTAAGTGAAGTCGTGAATAAAACATTGAAAAGGATAGATTGCATGAATGTGTGTGAATGTGTGGCCTATTTAGGCTTTCTGGTCATCCTCCAGAAAAGATAAAAGACTTGTAATTTTGGAAATTAATATTTACAAAAGCAGTAGTTTCCTCTTAAGGTTGTGACTTGTTATTACAGTTGCATGTTATTAATTTAAAATATAATTATTTAAAAGGAAATGTGTACATAACTGTCAAGTGGTTTTTTTTTTTTTTTTTAGAGCAAGCAAAGTGCCTGAGGTTAGATTAGTGCAACCTAGAAAATTTAAGAGAAATGGGACTCCCAAGTCCCATTTTTTTTTTTTTTTCCCTTTTGTTACCTGTGCATGGAAACATTGAGATACCTTACTTGTGTTGGAGAAGAGTGGGAGGGAATGACATCTGGCTATCACGCTGTTCTAAAACATCAAGAAAGATTCCAGGACTTAGGTTGTGGAAGAAGATAAAACCAGCCTCATCCTTAAGTTTTTCATCATTCTGATTTGCTGCTAAGGTCTTAAAATGTGCCTGAATCTAAAAATCTTTTGTAAATCTTTAACATTGTAATGAAACTAAAGTACGACTTTTAAGATGTTTTCACTTTATACTTACTGTTACAGATGGGTGTTTGTTACCTTTCAATGAGTTACCACCCTAACTCTGGTTCTTGAGGAATGATTCGAAAAGTAGCAGGTGGCCGTCACAGCTCTGAGGTTGGACTCCCTTACTGCTCTGGTGAACGCGGAAGCTGCCGTCTTGTCCTTAACCTCAGAGTCTTGTGCTCACCTGATGTAGAAGAACCTGCTGAATCATCCTTGTAGATCTCCAGTGTTCAACACAATTTACAAATCACAGTTTAGAAATTCAACCCAATTTCTAAATCATTGGGAAAAGTAATCCCAGAAAATTGTTATACTAAGAACCTTTGAGATTTTGTGTCAGTTATTAGTGTAATTCATTTCTATGCATATTACAGCCATTTTGTTCTGACAATTGAAATTTTATACTAAGTATTCCTTTTCAAGTTTATGTGACCTTTTGATGAACTTCATTAAACAGTTTTAAGAAAAACTGAACAGTTTTAAATGAATTTCATACAACTGCCCCCCAATGATAACAATGACTTGATCTTTGTGTGCACATATGAATAATAAAACTTGCCTGTTAATATGCATGGTAGCTATATCATCTTCTATAAATAATTTACACAACCTTCTTATTGTTGGACATTTCAGAAGTTATTTCTCATTTTTCACTCCTGGAGATAGATGAATGCCCCTATACTTAAATGCCCACATCTGCAGCAATTTTTCTGGAATTACATGTCACAGGAGGTCTCTTTCATAGAAACTTGTACTAGTTTTCACAC EMBV3_11728 CTCCATCGAGACCTATGAGCAAGAGAAGGCGGTCTTCCAGTTCTACCAGCGAACGAAATA Gene GeneID:513978|DUSP23:NM_001082609:269_cdna Constitutive 0 NULL GeneID:513978 3 GENE DUSP23 MGC148374 dual specificity phosphatase 23 EMBV3_14929 CCCTCAAAGAGTACTGTGGGCCTGGACCTTTAGAAACTGTGACCTGTGGTGGAGAAAAAG Gene GeneID:281767|FDFT1:NM_001013004:5_cdna Constitutive 1 NULL GeneID:281767 8 GENE FDFT1 MGC134482 farnesyl-diphosphate farnesyltransferase 1 EMBV3_15973 CTCTACCACACCTGCCTGGCCGTGCTGTCGCCCTGTGGATTTCTTGACTGGGGACAGGCC Variant GeneID:515911|STRA6:NM_001075730:97_cdna 484^569 1 EMBV3_09376 GeneID:515911 21 GENE STRA6 NULL stimulated by retinoic acid gene 6 homolog (mouse) EMBV3_17738 TGGATTTTCCTACAGCTTAATGATTGCCCTCTGGGGAGAGTTCTGGTACAGCAATCACAC Gene BVT0102_097864 + 1 EMBV3_07436 GK000017.2:19808283-19821908 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00079309 1 XLOC_048194 NonCoding TCONS_00079309 XLOC_048194 NonCoding NonCoding - 17:19815464-19816117 - TSS59249 653 1 TCONS_00079309_1 34 1 0 6.25068968854016e-05 0 0 0 0.000241944714180852 0 0 0 0 0 1.05169372166419e-05 0.000295692373275383 0 0 0 0.00121339706824159 0.000762738443552666 0.00349658936165237 0 0 0 0.00019318740479273 0.000252883965678471 0.000975584084010045 0 0 0 2.94186504905122e-05 0 5.52427145851747e-05 NM_014331.3 SLC7A11 Homo sapiens solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 (SLC7A11), mRNA. 1e-148 529 79.42 0.946401225114854 0 noncoding AAGTCGGGCAGAGGGAGAGAGCCTCACCATTCTCACTGGTCCTCATCTGCGGCAGTGTTTCTGCCTCTTAGCATTGTGATTGTGAACCTTGGCAAATGGGACTGTGTGTATTTTATACACATTTTACACAGTATCCATTGATAAATTCTTACGGTGCAAAATTCCTTTTCTGCATCTGTATTCCAAGACAATAGAAGTACTAAGATATTTATGAAAATTCAAATGATGCAAAGGGACTTTCATTTGTGGAGTGTGCAGTGCTTCTTAGGATTCTCTGGCACTGATACCTATACCAGCATGCGATATGTGAAATAAAATGGATTTTTCTACAGCTTAATGATTGCCCTCTGGGGAGAGTTCTGGTACAGCAATCACACTACCAGATGGTGTTTATGGGCTATTTGTGTAAGTGGTAAGATACTATGAAATAAGTGTGCATTCATCTGGTGGAAACTCTTGATGCATGTGTTTTCTTGTGGAATAAATTTTGGTGCAATATGATGTTAGTGTTGCATTGCATTTATTTCAGTTGTATTTATGTACATGTATACCTGTCATGCTTCTGGTTCAAACTTTGAATACATATTTTTGTACATATTTTTAGTAGAAAATACTTTAAATGGAAATTAAATAAACATTTGATAGTTTACCAA TCONS_00075042 TCONS_00075045 TCONS_00075053 TCONS_00075059 TCONS_00075062 . 3' 7183 TCONS_00075042 TCONS_00075045 TCONS_00075053 TCONS_00075059 TCONS_00075062 . 3' 7835 EMBV3_05968 GCCAAGCCCAATCAAGGCAACTGAAATATGATGACAGGAAAACAATTCTGTGGGTACTAC Gene GeneID:100297611|LOC100297611:XM_002685487:214_cdna Constitutive 0 NULL GeneID:100297611 2 GENE LOC100297611 NULL hypothetical protein LOC100297611 EMBV3_02860 AAGACACTGATTTATATATTGGGACTACAGGCTTCTGGGATCTGCTACAACAGCAGAACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12421 CTCATCATGGATCACTCTGAAATATATGAGATCTCAGCATTCTAAGTGAGGCACACAAGT Gene GeneID:538441|LOC538441:XM_002689664:3_cdna Constitutive 2 NULL GeneID:538441 8 GENE LOC538441 NULL similar to chromosome 9 open reading frame 41 EMBV3_39569 AGGGCCCCTGTCCTGGAATCTTAACGATCTGCTCTGAACCTGTGCTGCGTGAGAGAAGCC Gene GeneID:100336718|LOC100336718:XM_002691973:47_cdna Constitutive 0 NULL GeneID:100336718 12 GENE LOC100336718 NULL hypothetical protein LOC100336718 EMBV3_42381 TTAAAGTGCCTAATGTACCCCCCAGAGCATGGCTTACCTTCAGGGACAATCACCCAGGGA Gene GeneID:511424|LOC511424:NM_001104973:20_cdna Constitutive 0 NULL GeneID:511424 6 GENE LOC511424 MGC165834 hypothetical protein LOC511424 EMBV3_04026 TAGGTCTCTCGCTTCACCACCACTTAGGTCGCACTGTCTTTGTGTATTCCTCTGTTTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25036 CAGTCCAGTGGTTAAGGCTCTGCATTTCCAATGAAGGGGACATGGGTTCAGTTCCTGGTT Gene GeneID:515648|MGC127492:NM_001034503:83_cdna UTR3_Alt 2 NULL GeneID:515648 15 GENE MGC127492 NULL similar to Protein C11orf33 precursor EMBV3_43058 TCTTCTAAAAGAAGTTCATTATCATACAAGGTTGGCTTTGGAAACATTTTCACTTGCGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12336 GCTGGGGCCAAAACCACTCATTCCCTTTAACACAACTTCACCAGAGTGCTGCCATTTTTT Gene GeneID:526343|UTP15:NM_001101128:124_cdna UTR3_Alt 2 NULL GeneID:526343 20 GENE UTP15 NULL UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) EMBV3_05541 ATCCGAGAGGGACTCACTTATGGGAATTCATCCGCGACATCCTGCTAAACCCAGACAAGA Gene GeneID:505422|EHF:NM_001038036:27_cdna Constitutive 0 NULL GeneID:505422 15 GENE EHF MGC133971 ets homologous factor EMBV3_32479 GGATGGACAAGTACATACCCCACGGTGCGTACGAGTGTTTGCAATGGATAACCAGTAAGG Gene BVV0102_182682 + 0 NULL GK000017.2:12290205-12322225 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078964 1 XLOC_047849 NonCoding TCONS_00078964 XLOC_047849 NonCoding NonCoding - 17:12314626-12315076 - TSS58904 450 1 TCONS_00078964_1 34 0.622222222222222 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000586924488657333 0 0 0 0 0 3.29807426855733e-05 0 0.000447056260402961 0 0 0 0 0 0 XR_231685.1 LOC509006 PREDICTED: Bos taurus class I histocompatibility antigen, Gogo-C*0101/C*0102 alpha chain-like (LOC509006), transcript variant 1e-34 150 87.20 0.275555555555556 0 noncoding 0 0 0 0 -0.0769625964661777 0.583677018718157 0.00147494822777763 0.983299676367835 GTTCTCCCCCAAACTCCTCTCCCAGTCCAGGCTGCCACATAACATGGGGCAGAGTTCCATGTGCTACACAGTAGGTCCCTACTGGTTATCCATTGCAAACACTCGTACGCACCGTGGGGTATGTACTTGTCCATCCCAAACTCCCTAACTATCCCCTTCCCCTAGAGAGGAAGGGCAACTTTGAGAGAAGTGAAGTCTGTACAAGTTGGGAGGGGTTGTGCTGGGAACAGGAATTGTAGCGTCTAAAGGCTGGTCTCTCCCACAGCACACAAAAGAAGAGATGGTGCAAGGAGAGAAGGCCTTAGTTTGGGGAAGGTTTTAGTCCATTAAGGGCTTCCCTGGCAGCTCCGGTGGTAAAGAACTTGCCTGCAACGCAGGAGACCTGGGTTCGATCCCTGGGTCAGGAAGATTCCCCTGGAGAAGGGAATGGTTACCCACTCCAGTCTTCTT TCONS_00076662 TCONS_00076663 TCONS_00076664 . 3' 7148 TCONS_00076662 TCONS_00076663 TCONS_00076664 . 3' 7597 EMBV3_40122 ATGGGAGGCTATTTTATGAATGTTCTAGTGTTGTGTCGGACATGGGATTTGCTCTTTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35566 ATTTTAATAACGTGGTCCTTTTCCTAGTCCCTGCAGCCTGTTTCGTAAAGTGCAGTGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13144 CGAGTCCTTCTTCATTGTAACCACCAAATAAGAATCATTCACCATATTGTTCCCCACAAA Gene GeneID:510567|TMEM209:XM_002686941:66_cdna Constitutive 2 NULL GeneID:510567 4 GENE TMEM209 NULL transmembrane protein 209 EMBV3_10529 GTCTTTCCTGGCTTCCACTGGATCCCTAAAGCTTTTAAGGCATATGTTCCAAAGACTTTG Gene GeneID:280884|OGN:NM_173946:69_cdna Constitutive 0 NULL GeneID:280884 8 GENE OGN NULL osteoglycin EMBV3_26788 GGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCC Gene BVT0102_108879 + 1 EMBV3_26105 GK000015.2:81309912-81366668 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111527 TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00214738 TCONS_00249013 TCONS_00115729 TCONS_00209773 TCONS_00220662 TCONS_00251890 TCONS_00066215 TCONS_00187806 TCONS_00152890 TCONS_00251713 TCONS_00070841 TCONS_00135528 TCONS_00207978 TCONS_00208128 TCONS_00197486 TCONS_00090409 TCONS_00091329 TCONS_00252237 TCONS_00148452 TCONS_00189889 TCONS_00177994 TCONS_00250442 TCONS_00095034 TCONS_00048822 TCONS_00207077 TCONS_00088289 TCONS_00244654 TCONS_00049393 TCONS_00089425 TCONS_00116799 TCONS_00233691 TCONS_00187583 TCONS_00218396 TCONS_00098229 TCONS_00091802 TCONS_00189806 TCONS_00152647 TCONS_00148253 TCONS_00148670 TCONS_00072406 TCONS_00019962 TCONS_00207846 TCONS_00089139 TCONS_00239410 TCONS_00250939 TCONS_00166140 TCONS_00088086 TCONS_00008700 TCONS_00252006 TCONS_00229974 TCONS_00238893 TCONS_00046648 TCONS_00239411 TCONS_00244651 TCONS_00162783 TCONS_00038382 TCONS_00166330 TCONS_00129427 TCONS_00040697 TCONS_00161836 TCONS_00238308 TCONS_00107533 TCONS_00055678 TCONS_00107833 TCONS_00160965 TCONS_00167528 TCONS_00031280 TCONS_00249573 TCONS_00251994 TCONS_00055304 TCONS_00210178 TCONS_00017462 TCONS_00218852 TCONS_00244653 TCONS_00200531 TCONS_00130850 TCONS_00249090 TCONS_00071379 TCONS_00020171 TCONS_00056147 TCONS_00222057 TCONS_00021194 TCONS_00064858 TCONS_00019991 TCONS_00040834 TCONS_00006828 TCONS_00198434 TCONS_00250369 TCONS_00019197 TCONS_00250030 TCONS_00250581 TCONS_00040896 TCONS_00129450 TCONS_00175881 96 XLOC_067427 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_130757 XLOC_151956 XLOC_069898 XLOC_128284 XLOC_133979 XLOC_154831 XLOC_040929 XLOC_113849 XLOC_092655 XLOC_154654 XLOC_042618 XLOC_081751 XLOC_126492 XLOC_126641 XLOC_119147 XLOC_055190 XLOC_056104 XLOC_155178 XLOC_090332 XLOC_115926 XLOC_107767 XLOC_153385 XLOC_057631 XLOC_028953 XLOC_125596 XLOC_053076 XLOC_150512 XLOC_029524 XLOC_054210 XLOC_070965 XLOC_143172 XLOC_113628 XLOC_131716 XLOC_058475 XLOC_056573 XLOC_115843 XLOC_092412 XLOC_090135 XLOC_090550 XLOC_044175 XLOC_010640 XLOC_126361 XLOC_053925 XLOC_146076 XLOC_153882 XLOC_100978 XLOC_052873 XLOC_004257 XLOC_154947 XLOC_139468 XLOC_145559 XLOC_026788 XLOC_146077 XLOC_099664 XLOC_022207 XLOC_101168 XLOC_078140 XLOC_024513 XLOC_098721 XLOC_144975 XLOC_063443 XLOC_033486 XLOC_063743 XLOC_097858 XLOC_102364 XLOC_017528 XLOC_152516 XLOC_154935 XLOC_033112 XLOC_128688 XLOC_009039 XLOC_132171 XLOC_122183 XLOC_079556 XLOC_152033 XLOC_043150 XLOC_010849 XLOC_033950 XLOC_135366 XLOC_011867 XLOC_039582 XLOC_010669 XLOC_024648 XLOC_002390 XLOC_120088 XLOC_153312 XLOC_009877 XLOC_152973 XLOC_153524 XLOC_024710 XLOC_078163 XLOC_105660 Coding TCONS_00222057 XLOC_135366 Coding Coding - 7:70682995-70686837 - TSS166055 3842 2 TCONS_00222057_5 115 0.997917751171265 1 0 5.05901659931964e-07 4.79493141964255e-06 0 0 5.71135386159485e-07 1.33005749818789e-07 0 1.71054331302813e-07 1.30064629441795e-06 1.07092175724304e-06 1.48958039000441e-07 4.13638474427097e-06 0 2.44871816558218e-07 1.59623789052634e-07 0.00332700385437757 0.000192296171611 0.00859026605852141 1.86645827677117e-06 1.07770000193695e-05 6.58452760786576e-07 0.000464821333825734 0.000262264095623234 0.000504714169171867 5.63546402276529e-06 1.83380325625921e-06 1.6944788577739e-06 4.58341979923324e-06 6.31781897174857e-06 2.73853284638068e-06 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-114 417 93.48 0.0715773034877668 TCONS_00222057_9 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 2e-22 90.9 45.26 0.92156862745098 1 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 CCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGAGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGGATGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCCTGGGGTCGCAAAGAGTTGGACACACTGAGCGACTGAACTGAACTGAACTGAAGACATCACCAGACCCACTCACAGAACAAAGGACTGAGCAGAACTAGCCAGCTGTGGATGGGCCCATCCCCCACCGGAGACAAGCAGGGGAGGGCAGCCAGAGCCGGAAGGGGGCAATCTCGACCTCAGAGAGGCATCCTCTACCAAACTGCAAGCAGGCTTCACTGCTAACCAAGACTTCTTGGGATTCTGGATGGTCAATCCACTGGGAGGATCACAACCAGAGATCAGCCTCCCAGAAGAGACACACAGATCACCTGAGAAGGCGCGGCCGCTGTACACCCAGAACACCGAGCGCCGGACGGGGAGGCCATAAGACACAGCCTCCAACAGGGGGTGGGGGACTGTACTCACCAAACACCTGGTCACCTGAGCTGCTCGGACCTGGGAAGGGCACAAAATGCAGGCCCAACCAAGTCTGAGCCTTTGTGGACTACCCGAGAGCCTGAACCTGAGCGGCTTAGACCTGGGCAGTGCATGCAACCCAGGGCCTGCCACAGACAGTTCCCCGCAGAGCAACCTAGAGCCTGAGCAGTGTAGACTGGGAAAGCACACACGCCGTGAGCAGGGGCAAACCTGGTGTGGCCGAGACACTGCGAGCACTCCCCACACATGCCAGTGATATTTGTTTGCAGTGTTCCTCCCTCCCCACAGCACGATTGAACAAGTGAGCCTAAGAAAAGTGACCTCCACCAGCCCCTTGTGTCAGGGCGGAAATTAGACACTGAAGAGACCAGCAAACAGAAGAAGCTAAAATAAACAGAAGGAACCGCTTTGGAAGTGAGAGGTGCAATAGATTAAAACCCTGTAGTTAACACCGACTACATAGGAAGGGGCCTATAGATCTTGAAGAACTATAAGCCAGAGCGAGGAACTATCTGAAAATGAACTGCCCCAAACTGTCTGCAACAGCTCCAGAGAAAGTCCTAGATATATTTTTTACTATTATCATTTTATAAATTTTCATAAAATTTTTTATATTTTTAAGTCCTATATTACTCCTTTAATTTTTATTTTTATAACCTACTACTACTACTACTCAGTCGCTTCAGTCATGTCCGATTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATTGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTATAACCTACTATTACCTTGCAAAAAAAAAAAAAAAAAAAAAAGACCCTATTTTTAAAGCAAACTTCATATATATCTATATATTTTTTATAATTTTGTGACTTTGTTTTGTTTTTTTTAATATTGTATTTTTGAGAATCTAACCTCTACTCTAGATTTTTAATCTTTGCTTTTTGGTATTTGTTATCAATTTTGTACATTTAAGAACCCAATCTTCAGTACCCATTTTTACTTGGGAGTGAGATTACTGGCCTGATTGCTGTCTCCCCCTTTTGACTCTTCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCCTTCTCTTCTCTACCCAACTCTATGAATCTCTTTGTGTGTTCCAGGCTGTGGAGAACACTTAGGGAACTGATGACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCGCCTATTATCCTCCTGGCTACCTCTGTCTCTCTCCTTTTGATTCCACCTATTATCCTTCTGACTACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCATGAACATCTCTGAGGGATCCAGACTGTGGAGAACACATAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCCCTTTTGATTCCCACTCTTCTCCAAACCCACTGACATCTCAAAACTCACTACTGGACACTTCATTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAGCACTGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCCATCCAACCCCACCCACAGTGAGGAACCTCCAAAATAAAAAGGAACCACAAACTGCCAGAATATGGAAAGGCCACCCCAAACACAGCATTATAAACAAGATGAAATGGCAGAAAAATACTCATCAGGTAAAGGAACAGGATAAATGCCCATCAAACTAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAAATGACCCAAAATCTTGAAAACAAAACGGAGTCACAGATAAGTAGCCTGGAGACAAGGATTGGGAATATGCAACAAATGTTGAACAAGGACCTAGAAGAAATAAAAGAGACAATATATAATGAATAATGCAATAAATGAGATCAAAACCCTCTGGAGGGAACCAACAGTAGAATAATGGAAGCAGAAGATAGGATAAATGAGGTAGAAGGAGTGTTAGAAATAAATGAAACAGAGAGGAAAAAAGAATTAAAAGAAATGAGGACAAACTCAGAGACCTCTGGGACAATGTTAAACAACCCAACATTCGAATCATAGGAGTCCCAGAAGAAGAAGACAAACAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAGTCACCCAAGTCCAAGAAACCCAGAGAGTCCTAAACAGGGTAAACCCAAAGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAGTATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGAAGGGAATGGCAGGACATACTTAAAGTGATGAAAAAGGAAAAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCACTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAGAAAGGGTGTATAAACTCAAACCCAAAACAACAAAGTAAACGGCATTGGGATCATACTTATCAATAATTACCTTAAATGAAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAAAAACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGTGATGGAAAAAGATATTCCATGCAAATAGAGACCAAAAGAAAGCAGGAATAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAGGAAACAAAGAAGGATACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACATAGGACCACCACACTATGTAAGACAAATGCTAACAAGTATGAAAGGGAAATTAACAGTAACACAATAATAGAGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAAATAAACAGAAAAT TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 24667 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 28508 EMBV3_10220 CTGCTTGCCCGAACTTATTTTATGCAGAAAACCGACATAATTCTCAATAAAATTCCCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28669 GCTGTCCCCTCTTTCCATTTTCACAATGCCTAATGTTTATCTTGCTGCATATGTGGTTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38026 AGAGACCCTTGGCTTTGGCTGGGCATGTGTGCTTCTTGACCCCGTGATATGAGAATGTCA Gene BVT0102_053090 + 1 EMBV3_05714 GK000018.2:34275151-34348845 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085970 1 XLOC_052008 NonCoding TCONS_00085970 XLOC_052008 NonCoding NonCoding BEAN1 18:34341824-34347227 x TSS64072 1053 2 TCONS_00085970_2 41 0.110161443494777 2 0.8054424287301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000334644297412236 0 0 0 0 0 0 0 0 0 0 XM_005195238.1 TK2 PREDICTED: Bos taurus thymidine kinase 2, mitochondrial (TK2), 0.0 1900 100.00 0.999050332383666 0 noncoding 0 0 0 0 -0.018913427419131 0.86511970312033 0.00623538516323674 0.898900930441671 GAGAGAGGAAAACATGAAATGACTGGATGTGTGAACTGATACTCAGGACTGGTAAGTGACAAGCCAACGGTCATTCTGTTACTCCGTGGTCAAGTCAAGCAAGAACTCAAGCCCAAACTTCCAAGTCCAGAGCTCACTGCACTCTGTGTCCCCATCCCTGGCATGCTGGTCCCACCTCCCCAGAGCGAGTGAGCCGCAGACACTCGGTGAGCCACAGGGGCAGGGCAAGCATTCCTGGGCCCTGTTCTGAAAGGGGTCCTTCTGTCTGCCCTCCCAGAGCCGAGGTCCTAGGCCCTGTTCTGCATCTGTCATGTATGATTATGCATGGTTTCCAGGGCTTGTGTCTGAGTGCCCTCTGTGTCCTCAAGCTCAGCCCTGGGTCCAAGTTCACCAAAGGTGCCCAAGGCATATATTGAATGGGTGGCTCCAGCCTTGAGACCAGATGAAGAAGTGGCAGGGAGGCCCTGAACTCCCTCGCGGGAATGAGGTCTCTGTCTTGGGTGTCTGAGGATACTGTACTGAGAATGCTGTAGGAGGGCCCTGTTCCCAGGTGAAGGCCTGGACTTAGGCAAATCAGAAGCTGGAAGCTCAGCTGTGGCCACCTGTTCCTTCTTATCCCTTTCTAGCACCATGTCCAAAAGCCTCTCCCACATTCAGCCCATGGCAGGGACAGGGAGGTGAAGCAGGAACTTGGGGTTGCTGCCTGAGCTGTGAAGATGCCCGGCCAGCAGTTCTGCCCATGCTGGTAGCTCTTGAAACCTACTGACATTCATTAGAAGCGGCTGGCTTGAAATCCTTACTTTCTGGGCCAGTATATCATCCTACCTGAGAGCCAAGCCTTTGCCTGCTGAAGTTCATTGTAAGCTGCTCTCCTGCAGGTGCCTTCACTGGGGAGAGGGAGAGACCCTTGGCTTTGGCTGGGCATGTGTGCTTCTTGACCCCGTGATATGAGAATGTCAGGGTATGTGAATTTCTGGGATTCTTTGGGGGCCAAACGCACACCACTGTTTTGAGAGCCCCTGCTATGTGTAGGCTCTGTTTAAAGAGCTCACT TCONS_00082847 r 5' 1149 TCONS_00082847 r 5' 1149 EMBV3_33195 CATCAGCATCTCCTGGATCCTACCCATTACTTACAGTGGTGCCGTGTTCTACACAGGTGC Gene GeneID:785080|LOC785080:XM_002690256:100_cdna Constitutive 0 NULL GeneID:785080 9 GENE LOC785080 NULL similar to trace amine-associated receptor 6 EMBV3_18966 AGTCACTTGGCATCTCCCCGTTCCATGAATTTGCAGAGGTGGTGTTCACAGCCAACGACT Gene GeneID:280948|TTR:NM_173967:46_cdna Constitutive 0 NULL GeneID:280948 24 GENE TTR NULL transthyretin EMBV3_01200 TATCTTTCACGGAAGTACTTCGTTACTCGGGATAGACCACTGGAACAATGAGAAGGAGAG Variant GeneID:615508|TPRG1:XM_002684838:181_cdna 454^545 1 EMBV3_04375 GeneID:615508 1 GENE TPRG1 NULL tumor protein p63 regulated 1 EMBV3_02814 GCAAGTTTCTTTGCTGGGATGGCTGTCCTTTCTGGACCACCTTTAGCAGGCTGGTTATAC Gene GeneID:525480|SLC16A4:NM_001101123:128_cdna Constitutive 1 NULL GeneID:525480 3 GENE SLC16A4 MCT5 solute carrier family 16, member 4 (monocarboxylic acid transporter 5) EMBV3_20121 GAGGATGAAGAAGACGAAGTCGTCAATGAGGGTACCCCTTGTGCTGAGCAAATTAAGGAG Variant GeneID:512466|BCCIP:NM_001046122:33_cdna 154^399 3 EMBV3_22919 GeneID:512466 26 GENE BCCIP MGC134343 BRCA2 and CDKN1A interacting protein EMBV3_38463 GCCCCACCTCCCACCCCAGCTCCTGCAACAGCGTCCTCTGGTATCACGATTCCAAAACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17499 TTGGGCTCACAGATGGATGGTCCCACAGCATTCATTTCACTGTCATCCCTCTCCATGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24716 CATTGATGCAGGTGAGATGGTGATTGAGTATGCTGGCAACGTCATCCGTTCCATCCAGAC Gene GeneID:508330|MLL:XM_002693076:406_cdna Constitutive 0 NULL GeneID:508330 15 GENE MLL NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) EMBV3_17332 TGGAGATGCTGACTTTTAACCCACACAAGCGAATCTCTGCCTTCCGAGCCCTGCAGCACT Gene GeneID:510618|CDK4:NM_001037594:986_cdna Constitutive 1 NULL GeneID:510618 5 GENE CDK4 MGC133903 cyclin-dependent kinase 4 EMBV3_18603 GCTCTGAGATTTTAAGAAACACAATGTCAGGCAGTGCTACACAGGGATTAGCACAGTCAA Gene BVV0102_263620 + 0 NULL GK000015.2:21301235-21857696 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28536 ATCTTCTCCCTGCTGGCCTCTCTACCAGACGCAGAAGCAAAGTGGAGCCACATTTTCAGT Gene GeneID:524491|CUX2:XM_002694498:376_cdna Constitutive 2 NULL GeneID:524491 17 GENE CUX2 NULL cut-like homeobox 2 EMBV3_06325 CAGGCTGAACGACAGGCTGGACTATGAATGTCTCAATGGGTATGAGAACCGAGATGGACA Gene GeneID:509867|LOC509867:XM_002693912:9_cdna Constitutive 0 NULL GeneID:509867 16 GENE LOC509867 NULL similar to complement factor H-related 4 EMBV3_06512 GCATCGCAGAGGGAGCTTAATTTCATGGGCACAATTCTGGGTCACACACCCACGGCAAAA Gene GeneID:100297645|LOC100297645:XM_002689063:53_cdna Constitutive 0 NULL GeneID:100297645 7 GENE LOC100297645 NULL hypothetical protein LOC100297645 EMBV3_31377 TAGCTACTCACCCCTTCACAAAGCTGAAATCCACGGACCATGCAAGTCAAGAGTTAAACG Gene GeneID:515816|NEK6:NM_001098988:23_cdna UTR3_Alt 2 NULL GeneID:515816 11 GENE NEK6 MGC149008 NIMA (never in mitosis gene a)-related kinase 6 EMBV3_04961 GTATACAACAGCTCACCATCTGAAGGTCCATGAGCGGTCACACACAGGAGACCGGCCTTA Gene GeneID:533243|ZNF143:NM_001102154:161_cdna Constitutive 0 NULL GeneID:533243 15 GENE ZNF143 MGC165926 zinc finger protein 143 EMBV3_15506 TTGTAATACTAAATGTGTTACCATACCAAGGTCTCTAGATGGTCGTCTTCAGGTGTCCCA Variant GeneID:516010|SMAD2:NM_001046218:110_cdna 287^376 1 EMBV3_11455 GeneID:516010 24 GENE SMAD2 NULL SMAD family member 2 EMBV3_23654 TGTGGATTTTTAAATTTGTATGCTTGCTTTTAAAGTTAGAGCATGGGTAATTGTTAGTGG Gene GeneID:538989|NAA16:NM_001103100:166_cdna Constitutive 2 NULL GeneID:538989 12 GENE NAA16 MGC152570 NARG1L N(alpha)-acetyltransferase 16, NatA auxiliary subunit EMBV3_25215 GTAAACCAGATTTCAGATCAGTCCTTATGCACCTCCTCCTTCATCTGCAACTCCCCAGGG Gene GeneID:533788|PPP2R5A:NM_001081728:87_cdna UTR3_Alt 3 NULL GeneID:533788 16 GENE PPP2R5A MGC138101 protein phosphatase 2, regulatory subunit B', alpha isoform EMBV3_29043 GACCCTCTCTTCACATGTAATGGTTGCTTCTAACAACTGCTCACTGATGTGACCCTGCTC Gene BVT0102_115987 + 0 NULL GK000008.2:63335305-63338252 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227924 TCONS_00225621 TCONS_00227927 TCONS_00227923 TCONS_00225623 TCONS_00227928 TCONS_00227926 TCONS_00227929 TCONS_00227925 TCONS_00227930 2 XLOC_138370 XLOC_137796 Coding TCONS_00225621 XLOC_137796 Coding Coding NCBP1 8:63297658-63338347 = TSS168867 6464 1 TCONS_00225621_4 790 0.031095297029703 23 0.841697797876524 0.00196860266461172 0.00132812680969153 0.00139701950885096 0.0014879624219624 0.000742577656837901 0.000308196540596258 0.000473857068720439 0.000368515614218024 0.00114815891748382 0.00052148624978652 2.13077921720482e-16 2.49873854424937e-05 5.64994491696565e-05 1.15360387173869e-05 3.45260837268652e-05 0.000621002028042315 0.00059080619682151 0.000153418565192716 6.65259209931989e-05 0.000707960680507201 0.000418716815981616 0.000617683761186601 0.000747799140909727 0.000334154882828721 0.00056129238126125 9.87497515227857e-05 0.00095038122135408 0.000227964669205082 0.000225187385682132 1.4616186427736e-05 XM_003582545.2 NCBP1 PREDICTED: Bos taurus nuclear cap binding protein subunit 1, 80kDa (NCBP1), mRNA. 0.0 6881 100.00 0.590037128712871 NM_002486.4 NCBP1 Homo sapiens nuclear cap binding protein subunit 1, 80kDa (NCBP1), 0.0 4426 83.35 0.642481435643564 TCONS_00225621_4 sp|Q09161|NCBP1_HUMAN NCBP1_HUMAN Nuclear cap-binding protein subunit 1; 0.0 1636 99.11 0.99873417721519 3 coding 0 0 0 0 -0.537428532140624 0.485957265708778 -0.107757177143604 0.165712185512584 GCCCGTCCTGATCCTTTCTCAGATCTCTCTTCACCGAGCAGTCTCCGCCTAGAAATTGCCACCGCTCGCAGCCCTCGCACTCCCAGCCCCCTCCTGTATTTAGGAAGGAACGCCGTACCGCACCTCGCTCCGGAAGTTAGGCAGTTGGTGAAAGGGCCGCCGGGAAAACCCCCGGGAGGCCCCGAGAGAGGGACTGAAGTGGAGGTGGGGACTAGAGGGTCCCTCTTAGACAACCCGCCTCCGGGCGTGGCTCGCGACCTGCGGGGTTCGGCCTGGCGGAAGAGGCGGTGCTCTCCGCGTGGCCCCGGAAGGGCTTTCAGCGAAGGCGGGCGAAGGAAGCAGCCAAGAGGCGGAGGTAACCTGAGAGGGTCGCTGTGTGCGGGGCAGAAGCTACCGGCCTGGTGAGCTTCCAAAACCGGCTCTCCTGGATCCGAGCTCGCGGAGCCATCCAGCCATCCTGCCTTGTGCTTCCGGGAGCCGCCGCGACCGAAAGCGCCTGCGCGCCGGCCACTCCGCGCGCCTCGCCGCTGTCCGCCCACCGGCCGGCGGCCTGACGGTTCCTGCCGCGCTTCGTGACCGGTGTCTCAGCTCCGCGGAGCACCAGCGTGCGGCATGTCGCGGCGGCGGCACAGCGACGAGAACGATGGGGGACAACCTCACAAAAGGAGAAAGACCTCTGATGCAAATGAAACTGAAGATCACTTGGAATCTTTAATATGCAAAGTAGGAGAAAAGAGTGCCTGCTCTTTGGAGAGCAACCTAGAAGGCTTGGCTGGTGTTTTGGAAGCTGATCTTCCTAACTACAAGAGCAAGATCTTAAGGCTTCTTTGTACAGTTGCACGTCTGTTACCTGAGAAGTTGACCATTTATACAACATTAGTTGGACTACTGAATGCCAGGAATTACAACTTTGGTGGAGAATTTGTAGAAGCCATGATTCGCCAACTGAAAGAATCATTGAAATCAAACAATTATAATGAAGCTGTATATTTGGTCCGTTTTCTATCTGATCTTGTGAATTGTCATGTCATTGCTGCCCCATCAATGGTTGCTATGTTTGAAAATTTTGTAAGTGTAACTCAGGAAGAAGATGTGCCTCAGGTGCGGCGGGATTGGTACGTGTACGCGTTTCTGTCGTCCTTGCCCTGGGTTGGAAAGGAATTGTATGAAAAGAAAGATGCAGAGATGGACCGAATCTTTGCCAGCACTGAAAACTATCTTAAAAGACGCCAAAAGACTCATGTGCCCATGTTACAAGTATGGACTGCAGAGAAACCACATCCGCAAGAAGAGTATTTAGATTGCCTCTGGGCCCAGATTCAGAAATTGAAAAAGGATCGCTGGCAGGAGCGGCACATCCTAAGACCTTATCTTGCCTTTGACAGCATCCTGTGTGAAGCCCTGCAGCACAACCTGCCTCCATTCACACCGCCGCCTCACACTGAAGACTCGGTGTACCCGATGCCGAGGGTCATCTTCAGAATGTTTGATTACACAGATGATCCTGAGGGTCCTGTAATGCCAGGGAGTCATTCAGTGGAAAGATTTGTAATAGAAGAGAATCTTCACTGCATCATTAAGTCCCATTGGAAGGAAAGGAAGACTTGTGCTGCACAGCTAGTGAGTTATCCTGGGAAGAACAAGATCCCCTTGAATTACCACATAGTTGAGGTGATCTTTGCAGAGCTGTTTCAACTTCCGGCACCGCCTCATATCGATGTGATGTACACGACACTTCTCATTGAACTGTGCAAACTTCAGCCTGGCTCTCTACCCCAAGTTCTTGCACAGGCAACTGAAATGTTATATATGCGTTTGGACACAATGAATACTACATGTGTAGACAGGTTTATTAATTGGTTTTCCCATCATCTAAGTAACTTCCAATTCCGTTGGAGCTGGGAAGATTGGTCAGATTGTCTTACTCAAGATCCAGAAAGTCCCAAACCAAAGTTTGTAAGAGAAGTTCTAGAAAAATGTATGAGGTTGTCTTACCATCAGCGTATATTAGATTTTGTCCCTCCTACCTTCTCAGCTCTATGTCCTGCAAACCCAACCTGCATTTACAAATATGGAGATGAAAGTAGCAACTCTCTTCCTGGACATTCAGTTGCCCTCTGTTTAGCTGTTGCCTTTAAAAGTAAAGCAACCAATGATGAAATCTTCAGCATTCTGAAAGACGTCCCTAATCCTAATCAGGATGATGATGATGATGAAGGATTCAGCTTTAACCCACTGAAAATAGAAGTCTTTGTACAGACTCTGCTACACTTAGCAGCCAAGTCATTCAGCCACTCCTTCAGTGCTCTTGCGAAGTTTCATGAAGTCTTCAAAACCCTAGCTGAAAGTGATGAAGGAAAATTACATGTTCTAAGAGTCATGTTTGAGGTCTGGCGGAACCATCCACAGATGATTGCTGTACTAGTAGATAAGATGATTCGTACACAGATTGTTGACTGTGCTGCAGTAGCAAATTGGATCTTCTCTTCAGAATTATCTCGTGACTTTACTAGATTGTTTGTTTGGGAAATCTTGCACTCCACAATTCGCAAGATGAACAAACACGTTCTGAAGATCCAGAAAGAGCTAGAAGAGGCTAAAGAAAAACTCGCAAGACAACACAAACGGCGAAGTGATGATGATGACAGAAGCAGTGACAGGAAAGATGGGGCTCTTGAAGAACAAATAGAAAGACTGCAGGAAAAAGTGGAATCTGCTCAGAGTGAACAAAAGAATCTCTTCCTTGTCATATTTCAGCGTTTTATCATGATCCTGACTGAGCACTTAGTACGCTGTGAAACTGATGGGACCAGTGTGTTAACACCATGGTATAAGAACTGTATAGAGAGGCTCCAACAGATCTTCCTACAGCATCACCAAATAATCCAGCAGTACATGGTGACCCTGGAGAACCTGCTCTTCACTGCTGAATTAGACCCTCACATCCTGGCTGTGTTCCAGCAGTTCTGTGCCCTGCAGGCCTAAGGGTCATTTTTTTTTTCCCTTTCAAGATTTTTTTTAAAAGATCTCAAAATAATCTGTCTTATTTTTGATTGTTTGAATGCTTGCTTTCTTGTAGCATCCTGTCACTTTCTGAAAGAAACAGAGAGAGGAGGACAGTGAAGAAATATGGTATTGATTACCCGTAGTTTCCCCTAAAAAGCAGATATTCCCTAATGACAATAATGTGATAATACATAGGATGTATCATATATGTGACAAATACAACTTTTCTCTGATTTTTTTTTCTCCTTAAGGCACAAAAGATAACTAATATGAGGTATGTGAAACACTAGAGGGTCAAGCTTATTTACCAAGTAGTATATAGAACTGATGAATTTATTATCAAGTAGCATAGCTTTTCACAGCTCATGGGTAATAACCTAACATGGCTGAAATAAAACTAAAAATGTTTTTTAAACTTTGGTATTTCATGATTTATCATCTCAGTCTACTTTAGTGGTTTCTTTGTAAAATACCTCCATCTGAAATTTTCTTTTCAAAATACTTTTAATTACTCTAGTATTTTTAAGATACTATTTAAAAAGTTACCAGAGTAGCAATTCCTAAATCTGAACATATATCACCTGGGGCTCTCTAAAGTTATTTTTAAATTAATAATTAAACCACAGTCTTTCAAACACAGACATATCTGGTAGTTCTTAAGGCTCCCAGGTAATTGCAATATGCAGACAAGTTTGGAATTATCATCTTAGAATATCTGGTGATCTCAAATCTGAGACAGATCTATCCCAGCTCATATAGTGAATTTCATGTTAAATTGTGACTTAGAAGTAGCTAGACTGACTAATGCCTAGTGTTAGATGTAGGTTTGGATTTTATTTCTGTGGAATCTGGTCCAAGTAACTACTAATTCCTAAACCTGTTTCCTATATGGTGTTGAGGCTTAACTAAGATAAGAAAAGTACATTGTAAAATAACAAGGGGTTATCTGACATTCCACATTTCTAGCATTTTTAGTTTTTATTTAATTGAACCTTTGAAAAAATTTAGCAATAATCCCACAACTGAAGTAGCTTTGTTCATTTATACAATATAGGTGTTTTTTTTAAACTTTGTACATCATAAGTTTATGGTGCATAATATATGGGGTCTCTTTGGTTTACCATATACTTAATGGCTACAGAATATAGTCTACTCAGTAGATGGAAATTCCTAGGATTTTAAAACACCATACCATTTAAGACAAATAATCACAAGATTAAAGGTGCACGGCAAGTTACTGGCAGGAACTAAAAGCCAAGCGCTTAGCTAATGTTCTTTTGTTTATCCTGTTCCTCCTTCCCACAAACTATGTAATGAGTTAGAAACAGCTCCTGTCCTCAAGAAGCTAAAGGATAACCATTTAAGGCTTTGGTAACTTTGACCCTGAAGCTGCTTTGTGATCCTTTCATAATGTATTGCAAAGTGTGGCTACTTACACTTTTACTTGATCCACCTCCTTTCTCTTAGACCCTCTCTTCACATGTAATGGTTGCTTCTAACAACTGCTCACTGATGTGACCCTGCTCTGATCCAGTCTGGCAAACTAGGTGTATGGAAAAACCAAACCAGAGATTGAATTCTGAAGAAACAAACATTCAACAATTGCTCTCCCCAAAAATGAAGCTCCCAGAGACAAAAGAATGGCACGTCACACTGTACATCGCACCTTGCAATAAATCAATATTAAACTACACTGATGCCATTTAACATGCTTTTGTCCAAGTAAACATAATTTTTGTTTTCCTTGACTCTAAATCTCACAGGAATTACTCAGCACTTCAAATGAAGATAAAGTTTGCTTGCTTTTCCTGAAAAGTACTTAGCAGTGATTTCTATAACTTACTAATAATCTACAGTTATATCCGAAAATGAATGATGAGGACAGAACTTGGCGACCTGAGTAGAGCATATCTGGCTGTCAGTGATATCTGGACACCAGGACTGTCTTAAATTGATGAAGGTAAAGAGCGACTGACTGGAAGCCCACCTCAAGGAGACAAGTCTTAGCTATACTGGTCTCGATAATACATGCTCATTAATAACTTACGTGTCATTTGCTATAGATTTGCCATATTTAATCATCATGACAGTCATTAGATTATTATGCCTATATGACAGATAAAAACAGGCCCACTGAATAACTTACCCAAGGTCCACAGCTAGTAAATGGAATCTGAAACTATGTCCATGTGGTGGTTCAAGGGTTCCTTATCTCCCAATGCAGTGGTCAGCAGCCTGAACCCCTAATTACTTGCTGGAAGCTTTTTGTTTAGTCCAAAGAAGGTCTTGCTGCCCATTCAGAATTGGTTTTTACTGAGCTGTAATATTCAGCATAGCACATGAAAAAAATCAACATTCGAAAAACATATTAGACATTTCTGTATTGAATACTTATAGAGGAACAATTAGTAATTACAGTTTCAAGTCTTTGGCTTTGACTTGTTTTGACTTTTGCCCTTCTTCAAGCATAATCTCCAAGAGCTGATCTGAAGAAAAACATGAAAATGTATAAAAACTTCCTATTTGTAGCAGTAAGATAAAAAGTCCTGTCAAAGAACAACTTGAAATTATCTATCTTGAATTTGTTTTTATAAAAAAAAAAAAAATGCATACACCCGTTAATCAAGCACTTGGGATCAATTGCTCTTACCAGGTAACTACCCTGTAACCCATTTGACAAGATAGGGTAATATTCGACTATTGAAACTTGATCCAAATGTCTGGGGTGATGTCAGGTTGTAGGTTACCATTCCTTTAGAAGTGCTACATAAACATAGAAGCAAGCGGTCTTCCCTCCCAGGGTTACATGAGAATACCTGTAAGGCACTTTGCATAGTGTTTGTTTGCATGACACATGGAACATGCTCAGTAAATGTTAACAAGTTATCATTACCTTTGATCAACAAACAGTTTAGATGTTTTTCTATTTTACCCAGATTTGAAAAGGGATATCCAGACACTGATATTAAGATCTATCATAAACCCTAAGGATACAGAAAACTTGTCCCAGCAAAGCTCCCTCGCACCCTGACTTAGAGACAGACATGGTCTAGAAGACCTGGCCCAGGGTCTGGGGTGCAGTGGTCTACCACCATCCCTGCTGGTTCCTGGGATATGAATCCAGCTCGGCCAGCTTTTGCCTTTACTGCTAAAAGCTCTTCCTCTTAACCTCAATCGAGGGTTTGCCTTGGTCGTTATTTCTCAGTTTTAGCTCTAAGCTAACACTTTTAAACCCATTCTATTGCTCAGCTCCCAGCCTTATTATAGAAAAAATGGTCACACACTCAGTGTATTGCCCACCAGACCTGCTGGACCTTAACTGAAACTTGCTGTTAAGCCATAACATACATAATTATTGGAGCATTATTTATACAAGTGTTTCATTCATTTGTGAAGACTTTACATTTTGGTGAATTTTGAACAGGACCAATCTAAATTTCCACACTGTAGAACAGATC EMBV3_25671 CTCAACTGCTGGGGCAGCCGTCTCACTGATCTGTGACGGAGGAAGAGGTGTCCCGGGCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31833 AGCCTTTAAATCACTGCAGGAACAAAACAGATCTTCATCATAAAAGAGGAGAAACAGATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43323 CCTTTCTCCAGGGGGTCTCCCAGCTTCTGGCCACAGAGAAAATAAAAGCCGGAAACACTT Gene BVT0102_142619 + 0 NULL GK000019.2:25655087-25667178 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092868 1 XLOC_057009 NonCoding TCONS_00092868 XLOC_057009 NonCoding NonCoding - 19:25664046-25665802 - TSS69795 1227 2 TCONS_00092868_3 77 0.604726976365118 2 0.301994301994302 3.88654821106175e-09 0.000136221118903702 1.33719240738724e-08 0.00034043402255002 0.000685991355508342 1.18907828673678e-10 3.3106893924116e-12 1.1365359844026e-12 4.68831225593593e-13 0 0 0 4.48588610620848e-11 0.000338073054284651 7.99183140872352e-06 0 0 0 0.000479221728976899 4.84645995872588e-06 0.000244118375289161 1.20870344863632e-05 0 0 3.5818588517146e-31 0.000642577241379096 4.50294289581126e-11 0 0 0 XR_237004.1 PDRG1 PREDICTED: Bos taurus p53 and DNA-damage regulated 1 (PDRG1), 3e-47 194 70.51 0.362673186634067 0 noncoding 0 0 0 0 -0.113778686236657 0.299106479387317 0.021707210617846 0.674663662134349 CTTGTTGGCCTGGTTCTTCACTGATCCGGGAAGTGCTGGGGCTTGCTGGGACTCAGGCCCGGACCGCTTCTTTGAGCTCTTCCAGCTCTGCTGCCTTCCTTGGCGTCCACCACCACCGCCTTTCTCCAGGGGGTCTCCCAGCTTCTGGCCACAGAGAAAATAAAAGCCGGAAACACTTTTCACGTGGCGGTGCTGGGACAGACTGGGACCTGGGATCCTTTGCTTCAGTGCTTGCGCCTGGACACACCTCTTCTGGGGCAACAAGATACAAAGAAACCATATGGGACTAAAAATAACTGCGTTGCATGTGCAGCTGGGACAAATTCTGGACAAAAGATTAAAAAAAAGAGACCAGAGAATGGAAACCCAAACCCAACTGCCACTTTTGAAGAGCCTGGAGCAAAAGCAGGATACTGAACATGTCCACTGCATGCATCACCTCCTAAGGGGTTGGCAAAACTCCTGAGCCACCCCTCCAGCCCGACCTGGGGACACCCCTACCCTCACCCAACAGGAGGAACAGTTTGCTGTCCCCTCCACCTTTGGAAGCGAGCTTGTTTGTCTTTGCCCCCCCTGCTGCAGCAGAGACCCCAATAAAGCCTTGCCTGAATTTCTTGTTTGGCCTCTGGGGCCAATTTCTGTTGATTGCTGGGTATGCGTGCTCAGTCGTATCCAACTCCTTGTGACTCCACGGACTGTGACCCGCTAGGCTCCTCTGTCGATGGGATTTCCCAAGCAAGAAACCTGGAGTGGGTTGCCTTCTCCAGGGCATCTTCCTTACCCAGGGATCGAACCCACGTCTCTTTGCACCTACTCCTGCATTGGCAGGCGGGTTCTTTACCAGCTGAGGGATTGATTGGGGAAGGTCAAGAACCCTGGTCTTGTTAGGTCAGTTAGGTAACTGTGCACCTTCAGGAAGGCCTGCTGGAAAAGCTTATCTCTTTACTTCTCTCCCTCCTTCCCAGACTGACAGTCTTGAGACTAAGTTTCCTGGGATCTGAACACCTGCCTAGTGCCCTCTAGCTGAAACCAGCTCGGCCTTGCTTGGGACTTGTTTTTGCTGCCTTGTGCCACAGCCCAAATCCCAATAAACCTTGCTTGAATTTCTCATCTGATCATCAATTTCTGTTGACTAAAGAGCCCAAGGACCCGAGTTGGTAAGACCATGAGCCCAGAAAGCAGCCACCTGGCTCACCCACTCCTCAACCCTTAACTTCCTAAGAGCAG TCONS_00095986 TCONS_00095988 TCONS_00095987 r 3' 890 TCONS_00095986 TCONS_00095988 TCONS_00095987 r 3' 2645 EMBV3_37091 GAGCCCAGGATGTCAGGTGCCAAGGGGACAGTATCCACCAAGAGCAAATGTGTGTAAGTA Gene GeneID:505009|GLTPD1:NM_001075182:46_cdna Constitutive 1 NULL GeneID:505009 16 GENE GLTPD1 MGC140523 glycolipid transfer protein domain containing 1 EMBV3_36717 GGCAGTGAGATGCAGGAACATGAGGAAGAAAACTCATCGGTGGATTTAGCAAGCGAGAGG Gene BVV0102_387439 + 0 NULL GK000008.2:64349114-64437275 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232233 1 XLOC_141719 NonCoding TCONS_00232233 XLOC_141719 NonCoding NonCoding - 8:64360920-64361809 - TSS173737 889 3 TCONS_00232233_1 57 1 0 0.000168349465777831 0.000124333747799942 0.000124913444866007 2.80229911952206e-05 0.000388753563530582 8.0473353151407e-06 0.000262394330113702 0 0.000363887335968135 0 0 0 0 0.000301605785587908 5.51878270572855e-06 0 0 0 5.64640994428489e-05 0.00159360222394241 8.53691702616505e-05 0 0 0 0 0 1.97721054724699e-05 0 0 0 0 noncoding 0 0 0 0 0.0691527636314688 0.619258281898483 0.0399070034548993 0.520725627448149 ATGGCAGCCTGCCTTGCTGCTACTCCTCCTGCTGGTCCCTCGGAGGAGACATTCCTTTCAGAGGGGTGGAGCTGTCAAAATGGATTTTAAAATATGGGTTGTATTTTAATTTTTGGTTGTTTTCTAAATTTGGTCACTCATGTCGTCTTGTTCTAAAAAGAGAGAAAGGAAGCAGCTGCCCTCTTGGAATGCTCCAGAGAGGAGAAGGGAAGAAAGTCCTCACGCTCCCTGCTGATTGTTCAGCTTCCTTCCTGAGCTCTTGAAAGCCCACTCTGGGGGAGTAGAAGGGACAGGAGTGGTCTCTCTGACCTGAGAATTTCATGGAGGGCAGACCATCTGTCACCTGCCCCTGATGACACTCACTAAGGCAAGTGACCCCCTGCAAGTGCCAGACTGCACAGACCCTGTTCCCACCTGGACCCAGGCAATATGATTCAAGGTAGACACAGAGAGATGGGAGGAGCCTGGGGATAGAGTGGTCCAGTCTTCCTCAGAGAGCACTGGCAGCTGGGCCATCTTGAAGGGCTGAGCAGGCAGGGGGCTAGGCAGGGGGATGACGGACCAAGGGGAAGGCAGCCTGGCCAGGAATGGCAGGTGGTGGTGTTGCCTGGATGTGAAGAGCGTCCATCCCGAGAGCTGCAGATTCTATCACCCTCTGAGGTTTGGCTTCTCTCCACAACCCTGCATGAATCTCCCCTGCCAAGGTCCAGGACCTCTCGCTTGCTAAATCCACCGATGAGTTTTCTTCCTCATGTTCCTGCATCTCACTGCCACATTTGGCCTGGTCCATGCCTGTCTCCTGGCCCTCTCTCCTCTGGTGCCACCACATCTTCAGTTCTCCACTCACCCCAGACTTCTGTGGGCTTCCTCTACAACATCCTTGAGCCAC TCONS_00225651 . 5' 872 TCONS_00225651 . 5' 872 EMBV3_17532 ACAGAGCAGGTTAAAGGCTTGTTCTGAGTGAGCGAGATTTTCACAGGACCCGATTCAGGC Gene GeneID:534296|MTHFD1L:NM_001076018:7_cdna Constitutive 1 NULL GeneID:534296 9 GENE MTHFD1L MGC140483 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like EMBV3_22198 GTGGACTCGGTGGAAAGCTCGTCCTGCCAATGATCAAAGAACACATTATGCAGATGCTTC Gene GeneID:508273|RANBP6:NM_001037817:46_cdna UTR3_Alt 2 NULL GeneID:508273 12 GENE RANBP6 MGC128472 RAN binding protein 6 EMBV3_38786 TCAGAACCATGCAGATCCATCTCCTGCCCCTAAACGTGGTAAATTGCTTGAGGAAATTGG Gene BVT0102_199810 + 1 EMBV3_35483 GK000023.2:3149295-3171446 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24214 CGCTTTATTGCCATCTGCAATCCTCTGAGATACGCTTCTATCCTAACCAGTACCAGAGTC Gene GeneID:788750|LOC788750:XM_002693370:330_cdna Constitutive 0 NULL GeneID:788750 15 GENE LOC788750 NULL similar to olfactory receptor 586 (predicted) EMBV3_39902 ACCTCCCTTGCCTCACGTTTGTGTTGAAGCCCGTTTGAGTGTTAGCATCTGCCGTCTCTA Gene GeneID:615672|VPS8:XM_002684849:211_cdna Constitutive 0 NULL GeneID:615672 1 GENE VPS8 NULL vacuolar protein sorting 8 homolog (S. cerevisiae) EMBV3_06449 ACCACCATTATTATTAGCTCATCTCTTAAGGAGTTGCATTTTTATTGATGGATGCTAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00300 GGAAGAGAAGGGAAGTTTGATTGAATTAGATCTGTGATCCAATTAGGGGTGGGCTGATTG Gene BVT0102_338394 - 1 EMBV3_24837 GK000015.2:15676444-15705459 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060585 TCONS_00060586 1 XLOC_036781 NonCoding TCONS_00060586 XLOC_036781 NonCoding NonCoding - 15:15701189-15704730 - TSS45279 1339 1 TCONS_00060586_2 82 0.253174010455564 3 0.622598870056497 1.01595385091076e-05 3.75210595451149e-05 1.38212822155525e-05 0 0 0 0 0 0.000186005049924427 9.52569079227671e-05 0.000199206446488184 6.99529899665077e-05 0.000148669311350007 3.71928329347728e-09 1.35449583286916e-08 0.000591745023982114 0.00192060746885226 0.000281077734183555 4.81981640623154e-05 0 0 7.20444918077304e-05 0.000178136150066847 0.000632270565902325 3.62197859696628e-05 0 0 5.76041851990612e-05 0.000317839160437636 2.69403762794986e-05 XM_005194562.1 KDM4D PREDICTED: Bos taurus lysine (K)-specific demethylase 4D (KDM4D), 1e-160 571 100.00 0.235250186706497 NM_018039.2 KDM4D Homo sapiens lysine (K)-specific demethylase 4D (KDM4D), mRNA. 2e-124 450 91.67 0.234503360716953 0 noncoding 1 1 0 0 -0.014415971369803 0.914804690082586 -0.014415971369803 0.914804690082586 GTGAACGGAGAGCCCCGGGTAGCGGACACCAAGTCCCCGGCTAGCGAGAGAGCATAGAAAAGGATTACACCAAACTGTTTAAATCCAACGGCTCCTGCTTCCTTTCTCCTGAGCTAGACCCAACAAACCTAGAGAGTTGGGCTACGGAAAGTAGTATTTGCATTTAATTGGATATGAAGAAAGAACAAATATGTACGGGGGCAACCACGATCTTTATAAAGAACATAAGTTCCAGGAAAGCAGAAACCTTGTCTCTCTTGTTCACTGGTGTATCCTCTGCATATAGAACAGTGCTTGGCATATAATAGGTTCTGAGAATGGATAATCATCTGACTTCCCTGAGAAAATAGAAGCTCTTTTTCTCAGAGGACTCCTCATCTCTCCCCAGCAGATGTACTGAGCTGCTTTTGACTGTGTCCTTACATTGAGCTTTCCGTGTATTGGAAGAGGTGAACACGCTGTTGAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAATAGTCCTGGAGTGGATTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGTCTCCCACACTGTAGACAGATGCTTTTACTGTCTGAGCCACCAGGGAATTCACTGTTCGGGAACCCTAATCCTCTCCCTTGTGCTCTGGGTCCAGATCCCTGCAGCCTTCCCTAAAACAGTGCCTGGCACCAATAGGTGCACATAAATGTTTTCCAAATGAATGAATGAGTGAATCCATGAGAGAGTGAGTGAACGAGTTTTAACAGGAAAAAAAAATCACATTTGCTGCAAAAAGTTATTATCTTAATCTTTATATGTCCTTATACTTTAAAGGAGAAAAAAGTAATTTTTATTCTGCTAGTCTGAAATCCAGATTTAAAGTGAAGATACACCAAGACCCAGAAAGACGTTGTTTTTAGGAAAGAATCTCTAAATGAAAAATCAAGTGATTAACAGGCTCTATAAGTACTATCAGAATTTTAATTCAATCAGCCCACCCCTAATTGGATCACAGATCTAATTCAATCAAACTTCCCTTCTCTTCCTCAATTCTAGTAAACCCTCTCATTTACAAAGTTACCAGCCCACAAACTGTGAAACTTTTGCTTGAAAATGAAGGAAAAAACCTAGTGGTCAGAAGTTAGAAATCACATTTCAAAAATAAAAATATCAATGTAATAATATCAAAAATGTAAAAAATCACATTTAAAAAATAAAGTAATATAAAAAATCTGAAAATGACTGATTTTTATAAAAAGTTATTGCTCTAACCTGTTTTGAAAAG TCONS_00058358 r 5' 2642 TCONS_00058358 r 5' 125 EMBV3_18043 GCCTTGTAAGAGCAGATCCCCTGTTCTGCAGGTCTCCTTGACCCTGTGTTCATTGCACTA Gene BVV0102_217404 + 0 NULL GK000005.2:32241300-32262132 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11597 TGCGTCTTCTTCGACGAGGCCAACAAGCAGAATGGAGGACAAAGGAGAAGTGAAGTGCAT Variant GeneID:100140797|LOC100140797:XM_002697730:67_cdna 245^321 1 EMBV3_16113 GeneID:100140797 24 GENE LOC100140797 NULL similar to Uncharacterized protein C18orf8 (Colon cancer-associated protein Mic1) (Mic-1) EMBV3_20931 CAGCCCCAGTCTCCCCACCCGTGTTTTGGTACCTGTTTTCTCCTATGAAATGCAGTCCTT Gene GeneID:282082|SSRP1:NM_001101041:7_cdna Constitutive 0 NULL GeneID:282082 15 GENE SSRP1 NULL structure specific recognition protein 1 EMBV3_28360 GGGTTCGTTATTGGAATTAACCTGGTGCTGCATATTATCAAATTCTATCTACTGCAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08506 ATGAGGACCTTGGCTGATGCCCTGCACACCCTCAGGAATTATCTGCCCCCTGTCTACAGT Gene GeneID:521556|LOC521556:XM_002691521:537_cdna Constitutive 0 NULL GeneID:521556 11 GENE LOC521556 NULL similar to hCG1648308 EMBV3_13423 TCTTACACAAGTATTCAGTTGACCCAGGGAGAGTCGGCATTTCTGGTGACAGTGCTGGTG Gene GeneID:534212|NCEH1:NM_001123034:31_cdna UTR3_Alt 3 NULL GeneID:534212 1 GENE NCEH1 AADACL1 neutral cholesterol ester hydrolase 1 EMBV3_20179 CAGACGCCCTGTCGGCAAGAGCCCGTGTCGTTTTTACTGAATCGTGTAAATCTGGGCAGA Gene BVV0102_091586 + 0 NULL GK000005.2:118012365-118023150 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202107 1 XLOC_123752 NonCoding TCONS_00202107 XLOC_123752 NonCoding NonCoding - 5:118019016-118019585 - TSS151675 569 1 TCONS_00202107_1 39 1 0 2.39115894276449e-05 0 0.00016263617302179 5.83770977108905e-05 0 0 0 0 2.07999288673183e-05 0 4.02318587378593e-06 6.91258695704098e-05 0 4.96027655250581e-05 0 0.000742681173837021 2.91780068830906e-05 0.000264578744309572 0.00108383090868256 0.000164303457642297 0 3.91248538143531e-05 1.6123109553102e-05 0.000883898507659908 0 4.95287549163307e-05 0 1.68807570685338e-05 0.000145040864387296 0 NM_015124.3 GRAMD4 Homo sapiens GRAM domain containing 4 (GRAMD4), mRNA. 5e-65 251 81.72 0.46572934973638 0 noncoding 0 0 0 0 0.118943152948559 0.320724760709997 0.0368628750376771 0.500306186923743 AAAATTTATAATTTATACAAGACTTTTTTCTTTAAACAAGGTTTTTTTTTTTTTTTTAAAAAAAAAGTTACAGGAGGGTTTTTTTTCAATTAGTTCTTCATACAGTACAGTCCTTTTGTAGAACAAAAGTTACTGGTAAGGAGCATTTACAGATTGAAAATAGACTCAAGCTTCAGACATAAAAACGTTAACATTCATTCTAGTTCCGTGATCAGTCGCAGAAATTAAACATCTGCCCAGATTTACACGATTCAGTAAAAACGACACGGGCTCTTGCCGACAGGGCGTCTGCCCAGGCCGGCGCCCTCCCGGCGGAGGCCCCGGGCTTCCAAGCAGGGCCCGCCGCGGCCCCCGGCGGCCGCCCCCAGCACATGGTCAGTTTTCATCTCCCTTTCTCCTCGGAAGGGACTCAAACCAAGCCACGTGGCTCTGAAGACAGCAAGTCCGCTCCCCTGCAGGGCCCCTGCCCCAGGCTTGGGGACACACGCTGACCACACAGTGGCCCCAGCGAGGGCGTCCGGCAGCACTCCCGGGTGTCGCCCCCGCAGTCACCCTGGGCCCAGTCCAGG TCONS_00196709 . 3' 3566 TCONS_00196709 . 3' 4134 EMBV3_26533 CAATACTAAGTTATCTACTCCGAGCTGTCTGCATGGCAAGTATGTCCGTGCGGAAAAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16363 CTCCGGCCGCCGGGTTCTCACCTCGCCATGGTCCACTCAGAACCAGCCACTGCTTGTGGA Variant GeneID:286849|CD40:NM_001105611:770_cdna 50^97 1 EMBV3_36597 GeneID:286849 13 GENE CD40 MGC157138 TNFRSF5 CD40 molecule, TNF receptor superfamily member 5 EMBV3_28105 GAACCTGTAGACCAACTTGGGGAGAACTAATAACCCACAAACAAGGCATCTCTCTCCATT Gene BVV0102_146193 + 1 EMBV3_03470 GK000021.2:22123882-22128811 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24059 ATCTTCTGTCTGGCCATCCTCATCTTCCTGGTCAATGGCGTGGTCTTTGTGCTGCGCTAC Gene GeneID:540137|TMEM132A:NM_001102237:167_cdna Constitutive 1 NULL GeneID:540137 29 GENE TMEM132A MGC179422 transmembrane protein 132A EMBV3_20109 GGTGCATTGAGCTTTGGACACATACTTTTAGGGCCTTTGGTGGAGATTTCTCACTACCGG Gene GeneID:618648|ARPP21:NM_001076950:232_cdna Constitutive 2 NULL GeneID:618648 22 GENE ARPP21 ARPP-21 cyclic AMP-regulated phosphoprotein, 21 kDa EMBV3_21987 CCCCTACTTGCAAATGAGCCCCTTGAGGACAGGGACAGTTTGATTCCTCATTATATCCTC Gene GeneID:781117|SLC46A3:NM_001103303:223_cdna Constitutive 0 NULL GeneID:781117 12 GENE SLC46A3 MGC157169 solute carrier family 46, member 3 EMBV3_37391 GCTGACACAATTCCTCTATGAGGTTGCTTCCCATTGCTAATGTTAGTGCTTTCGGTGTGG Gene BVT0102_151155 + 0 NULL GK000013.2:65740581-65744267 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043590 TCONS_00043594 TCONS_00043601 TCONS_00043575 TCONS_00043574 TCONS_00043584 TCONS_00043593 TCONS_00043589 TCONS_00043579 TCONS_00043592 TCONS_00043587 TCONS_00043577 TCONS_00043586 TCONS_00043591 TCONS_00043588 TCONS_00043595 TCONS_00043598 TCONS_00043597 TCONS_00043602 TCONS_00043596 TCONS_00043582 TCONS_00043576 TCONS_00043585 TCONS_00043578 TCONS_00043599 TCONS_00043600 1 XLOC_025975 Coding TCONS_00043594 XLOC_025975 Coding Coding PHF20 13:65660624-65744163 j TSS32207 6398 1 TCONS_00043594_3 605 0.0309471709909347 16 0.923603629485982 0.00122156496715395 0.000764518115787847 0.000444495027580078 0.000702805676884402 7.35960766719513e-05 5.99771502559478e-09 0.000458579177287036 0.000125903110838427 7.11891581760455e-05 3.05179930483581e-31 1.11705455556696e-29 1.74957023847869e-20 0.000128239656504407 0.00016575954269159 1.2415492055478e-14 2.87893186468097e-57 1.19483384624251e-81 1.35322344862508e-31 0.000571249233581493 0.000527324659067771 9.94406122510015e-05 1.16257283887626e-05 1.06006746219919e-32 4.83762964108155e-35 0.00132749721865496 0.000713947952958596 0.00067644600264806 1.10802876102806e-46 4.57563727058618e-10 4.36495511332642e-06 NM_001168426.1 PHF20 Bos taurus PHD finger protein 20 (PHF20), mRNA. 0.0 4929 100.00 0.427008440137543 NM_016436.4 PHF20 Homo sapiens PHD finger protein 20 (PHF20), mRNA. 0.0 3828 90.87 0.427008440137543 TCONS_00043594_3 sp|Q9BVI0|PHF20_HUMAN PHF20_HUMAN PHD finger protein 20; 0.0 1078 90.31 0.998347107438017 1 coding 1 0 1 1 -0.0668706982711952 0.613151105625452 -0.119106561586514 0.268132155295173 CTTTGCGGGAGCTCAGGTCTGTGCCTGATTTTGATGAAATAATGACTCTTAGGTGCTGCCTTTGGGTTAGATTTAATCCAGGGGAACTGGCAGAGTTTCTACATCATGATTTATTCTACTATTCAGCTGCATGATTGAGAAGGACGATACTGGACTCTAATTTCACTCTTTCCCTGGTGTTTGCTGTCCTGCCTCAGTTCTGTCTGTAGCAGGGGCCACCACAGCTTAATGGTGGCAGAACCTCTGCAGACGAGGTGCTCCCTTTATTTCCTGTAAAGTTATTCTGTCTTTCTGGTGCTGCTGGGAGGAGGCTGGGAATACAGTGAAGTCACTCCCTGTAGACTCGGGAAGGCTTGGTCTGATCTTTCTGCCACTCATAACCTCCTTGGTGGTTTTGCCGAGGCCAAGCATTGACTGGGCAGTCTGGTGGGCAGGGGCTGTAGCCAGAGTGGAGAGCCCTGGCTGCTGGCATTGGGTGTCCCACATGACTGACTCACAGCTAGCGAGCAACTTTTAGAGTTTCTTAAGGGAGTCATTTAGCAATTGGAAACTTCGGAGAATAATGCCATGTTATTTAGCCCTTTTCACCTGGCATGAGTCTTTGGCAGTGGCAGTTAAGCATCATTCTCCGTGAAGGCAGCCACACCTGATAGCCTTGTTAGATCCTCGGTCTGCGTTGGAGTGAGGAAGGGATTCTGCTTCCAGGAAGTCTTTGTTTGGAAGCCTTCTCTTCTCTGGTACTTACACTGTGAAATTTTATGATGGAGTAGTTCAGACTGTCAAACATATTCATGTCAAAGCTTTTTCCAAAGATCAGAATATTGTGGGTAATGCTAGGCCTAAAGAAACAGAACACAAAAGTCTTCTATCATCTGATAAACGAGAAAAGTTTAAAGAACAGAGAAAACCCACAGCCATTGTGAAGAAAGACAAAGAGGACAAAGCCTTAAAGACAGAAAAGCGAGCCAAGCAGTCTGATAAAGAAGGAAAGTTAATCTGTGCTGAAAAGGGAAAAGCGTCAGAGAAGAGCCTTCCCAAGAACGAGAAGGAAGATAAGGAGAACATTTCAGAAAATGACAGAGAGTATTCTGGAGATGCTCAAGTGGATAAGAAACCTGAAAAAGACATTGTGAAGAGTCCACAGGAAAACTTGAGGGAGCCAAAAAGAAAGCGAGGCCGACCCCCTTCCATTGCTCCTACTGCTGTGGATTCAAACTCTCAAACTTTGCAACCAATAACATTGGAATTGAGAAGACGGAAAATATCAAAAGGAAATGAAGTCCCGTTAAAACGTCCTCGGCTTGACAAAAATTCATCCCAGGAAAAGTCAAAAAACTACTCGGAAAACACTGACAAAGACTTATCAAGGAGACGGTCTTCCAGGCTGTCCACTAATGGGACCCATGAAATTCTAGATCCTGACTTGGTTGTATCAGATTTGGTTGATACGGTTAATACTGATCCTTTGCAAAACACTTCATCCAATACCAAGGAATCAGAAGAAGGTCAGTTGAAATCTCCTTTGGAAGCTGGCCAGGTCTCATCCACAATAACTTGCCACTCCATTGGGGATGGATTGGGGCCTGCAGGCTTGGAGTTGAACTGCAAGTCAATGGGAGAAAACACTATGAAAACAGAACCGGCTTCTCCCCTTGCTGAATTACAAGAGATTTCTACTGTGGCAGTAACAAATACTTTAAAGAGAACAAATGATTTTGTGACATCTAAAGCACCAGCCAGCGACCTAAATCACAAATTTAGGTGCACGGTTGTGGATTGTTTAAAATTTTTCCGCAAAGCCAAACTGTTGCATTATCACATGAAGTATTTCCACGGAATAGAAAAGTCGCCAGAGCCAGAGGAGAACCCAGGAAAGAGGCACGTCCAGACCAGGGGCTCTTCAGCTTCAGACAAGGCCAGCCAGGAGAGCCTGACCAGGAAGCGGGTCTCAGCCAGTTCCCCAACTGCAAAAGACAAGGAGAAGAATAAAGAGAAGAAATTCAAAGAGTTTGTGAGGGTGAAACCAAAGAAGAAAAAGAAAAAGAAAAAGAAAACCAAACCTGAATGCCCTTGCAGTGAGGAGGTCAGTGACACTCCCCAGGAACCTTCTCCACCTAAGACATTTGCTGTTACCAAGTGTGGTTCCTCACACAAGCCTGGTGTCCATATGAGCCCACAGATCCAAGGCTCAGAGTCTGGAAACCACAGAGGGAAAGTGAAAGTGTCTGAAGAGGATAATCTGAGTGAGTCCTCTTCCGAGAGCTTTCTTTGGAGCGATGAGGAGTATGGCCAAGACATCGATGTGACCACTAATCCAGACGAGGAACTTGATGGGGATGACCGTTATGACTTTGAAGTGGTCCGCTGCATCTGTGAGGTTCAGGAGGAAAATGACTTCATGATTCAGTGTGAAGAGTGCCAGTGCTGGCAGCATGGGGTCTGCATGGGATTACTGGAAGAAAATGTGCCTGAGAAATACACCTGTTATGTTTGCCGAGACCCTCCAGGTCAGAGGCCTGGCTTCAAATACTGGTATGACAAGGAGTGGTTGAGCAGGGGACACATGCACGGCCTGGCATTTTTAGAAGAGAACTATTCCCACCAGAACGCCAAGAAGATCGTGGCCACCCACCAGCTTCTCGGCGACGTGCAGAGAGTGATCGAGGTTCTGCACGGCCTGCAGCTCAAGATGAGCATCTTGCAAAGCCGGGGGCATCCTGACCTGCAGCTGTGGTGCCAGCCTTGGAAGCAGCATCTGGCGGAGGGGCGGTCTCATTCCAAACACATCCGTGTCACTGAAGCCAAGAGTAGGGAGGAAGCCCCAAGCTATAGAACTTTGAACGGGGCGATGGAGAAGCCCCTGCCCCTGCCCACCTCTGTGGAGGAGTCCTATATCACCAGCGAGCACTGCTACCAGAAGCCCCGCACCTACTACCCAGCTGTGGAGCAGAAGCTAGTGGTGGAGACCCGGCGCTCTGCCCTCGACGACGCTGTCAACCCCCGCCACGAGAACGGTGATGATTCCCTGTCTCCACGCTTGGGCTGGCCTCTAGACCAAGACAGGAGCAGAGGGGACAGTGACCCCAAACCCAGTTCCCCAAAGGTGAGGGAATATGTCTCCAAAAAGGTCCTACCTGAGGAAGCCCCTGCCCGGAAGCTGCTGGACAGAGGTGGAGAGGGGTTGCTGAGCTCCCAGCACCAGTGGCAGTTTAACCTGCTGACACACGTGGAATCCCTTCAGGACGAAGTCACGCACAGGATGGACTCCATTGAGAAGGAGCTGGATGTGTTGGAGAGCTGGCTGGACTACACTGGGGAACTGGAGCCCCCGGAGCCTCTGGCCAGGCTTCCACAGCTCAAGCATTGCATCAAGCAGCTGCTGACGGACCTGGGCAAGGTGCAGCAGATCGCGCTCTGCTGCTCAACATGAAACTGGGCACCCCAGACTAATGGGGGCACAATCCTGGGAACCCATACAGCCTGTGGAAGAAGTAGAATCTCACTGTCATAAGAATCTAGGAGGAATCCCAAAACGGAAGCAGACAGGGTCTGGAACCCGAAGGACAGCATTTTCTACCCACTTCTTAATATTGACAGCTTACCAGTTCTATTTAATGTCCCCAAAATGGTTCTCCCAAATTTGAACTCTTTCACTGTAAAGATTTGCTACAAAGATGTGGTTTGGGAGATGACCTTATTTTATATTGTAAAGAAATCAGATTCTACATCTGCCGCTTTTCTCCTTCCCTGAAGGGTATATGTTCAGTAGTCAGCATTTTCAGAATTGTTTTAATATACTTTAACACTTTAAATTTCCTGTTTGTATTATTTTGTGAGATCAAGGTGATTATGCTGCTTAAGGTCCAGGTACAATTTGTACCTTTGGAGACAATATTTGTTACTCTCGCAGGTTACGGTTCCACGTGTAATTGTTTTGTTTTTTCCTTACCAGGTAAAGTTAAAGAAACTGTTCCATGCTTTGAGGAATGACCCATTTTACCATTTAGTTTTCCTATCACTAAAGGCAAAAATCAAAGCACATTTGTCCATTAACACTCACGAGTTAATTCTGGGTTTATGGATCTGTAATGTTATATGCTGCAAATCTTTACTATGTAAACGTGAAGTAGCCAATATCTCAATAGCAATGACAGGATCTCCGGTGACCTCCGGGATGGTTAGGCTTTACGGCACAGGTAATCGTGGTCACAAGGGCCTCTGTACAAAGATCTGTTTCAGGGAATGCTTTGTCTAGTGATTTAATTCGCCATTTGATATAAAATGAATATAGGGCAAGTTGACCTGCTGGAGCTTATGTATCAGAGGGAATACATGTGGCTACAACATCTGTGATAAAGCTGACACAATTCCTCTATGAGGTTGCTTCCCATTGCTAATGTTAGTGCTTTCGGTGTGGGAAGAAACACTCACGGAGTGTGCATGGCATCTGTCTGTATTTTGTACAATTTATCAGATGGCCACATTTTAAGAAGTGTGTGATGCTTGTCCGAAAAGGGAAGAAACAGGATGATTTTCTGTAGCCACAACTGTGAGGTACAGTGATTTGTATTGATATTATTAAATTACTGATTTTTCTTTCCTGAAAACACATTTGACCGTCACTTCTGGGGAAGCTGTAACGGTGGTCAAATCTCACGTTTTCTTCAAGATGGAAGAAGAAACTGAGTTACCCTAACTTTACCAAGTGGTCATTAGTGGGTTTATTTTATGCTTTTTGTAAAGGAAATAATCCCTTTTCACTCATTGTGACTTTTGTCCTTTGGGAAGCAGGGATGACTCTGAAGTTCTGACCACTTCAGTGTGCTTCCCTAATTTAAAGCCATGTTGGAGGGGCTCCATCCCCAATTCCTTGGTCAAGTTGAATTAACCCCAAGCTGGAGCACTGGAAACTGTTCTTTGCAAATATTACCGTTACCATTTAGAAATATGTACACTACCTAAGTTTTCTTTTGAGAAAAACTATCCACCTATAAAAAAGAAAAATTGCCTTGACAAAAACAGTTCTGGTTTGACTAATCATTTTGTTTCTTTAAGTGATGAGTGTATGCAAGGTGGACCCTTGATGAGCCAACATTGCACTGTGGATACATATCTATGTTTACGCGCTGTTAGAACAGAAGGCGCTGTATATAGAAATGTTGCTTTGAAGCAATATTTGCAAAACATGCAAACTTCTGTATCTGTATTTGGAAAAATAAAACAGGTTTTTGTTGCTACGTTTCAGTCACTTGTTATCTACTCAATCTTTAATGTGCATTAATTTTTCCATAAACATTACCTTTTAAAGCAAGTCTGCTTTTATATTCTAAATAGATTTATCTTTGGCAGGGAGGTAGCCATACATGCATGCTCAGTCATGTCCAACTCTTTGTGACCCTGTGGACTGTAATCCACCAGGCTCCACTGTCTATGGGATTCTCCATGCAAAAATACTTGAGTGGGCTGCCATTTCCTCCTCCAAGAGATCTTCCCAACCCAAGGATCGAACCTGGATCTCCTGCATTGGCAGGTGGATTCTTTACTACTGAGCCACCTGGGAAGCCCTGTAGGAGCAGATGCGGGCTTAAATCCAAAATTCCAAGGAAGTATACAAAATACTTTTGAATTCATTGAAGTGTCTAATATTCAAAAGTAAAATGCCCCATACCACCCTCTAGCGCAGACTGACTCATGCTCTGTGGTGTGAGCTGCAGGACTATTACCTTTTTGCTTGTTGAAAGCAGTGCAGGGAAGACAGGTCTGGCCTTTCTTGTATTAAAGATGGCACCCATGACAATTAGGACCCTTCTGAAGGCCAAGCCAAACGACTTTGGACCCCAATCAGCTCCCTTCCTGGGTGTGCATTAGACTCAAGAAATGGAGTTATACTGCAGAGCTTCCCTATTATTTGCCAAATCTCTTCCCTTCCTAAACAATTATGCTTATTTTAGAAAGTTAGGAGTAGCTCCAACAATGTAAATAATCCATCAGTTCACACCAAATCTGTTCCTAAAATTTTTCAAGCCTAAAATTTGGTAAGAGAGGGGTCTGGAAGCTTAAACCAGAATTCACAAGAACTAGCCTCTCTAGGTAAGAACCTGCAGTGAACACTTGTTAAAACAGCCCTGTAACTTGGGCCTTTGTGGGGAAGCCTGCGCCCACAAGGTAGGCTAATGGAACAAGTTGAGGGCAGTATTGTTACAGCAGCAGCCAGTTAAATCAGCACTTAGTTACAGTCACCTATTTGCCTGCACGACCCACAGCCACAAAGAAGATTGTACCACTGTCCTCTATCCGCTGAGGTAGGAAAACAAGCTCAAATTCTAGCCAATGAGAGGTACAGGCGAATTTGGAACCAGGCTGCCGAGTCCTCACTGCATAGGCTCCAACCAAACAAA EMBV3_13170 AATCATTCCCCCAAAGCCTTGTTTTACCTCGGCCCCTTCTTTTGTGCCAGTGTTCCCGTG Gene GeneID:505320|ARIH2:XM_002697044:504_cdna UTR3_Alt 2 NULL GeneID:505320 22 GENE ARIH2 NULL ariadne homolog 2 (Drosophila) EMBV3_01771 GTGTTTACTGAACCATTGGTCTCCCAAGGCCCTTCTGGTGGAAGAATGATAGGATGGTTC Gene GeneID:513415|SLC25A14:NM_001046145:74_cdna Constitutive 0 NULL GeneID:513415 X GENE SLC25A14 BMCP-1 MGC137654 UCP5 solute carrier family 25 (mitochondrial carrier, brain), member 14 EMBV3_38570 AAACGAGCCAGTTGTGGTTTTAGAGCCAGATGAGAAGACGGATCAGCAAGTTCCCAGGCA Gene GeneID:512489|GRK4:XM_002688435:64_cdna Constitutive 0 NULL GeneID:512489 6 GENE GRK4 NULL G protein-coupled receptor kinase 4 EMBV3_15489 ATTGGGCCACATGGTTCTGGAGCATAGCAGGGAGGGTTACCACTTCATCAGGCCAAGGCT Gene GeneID:100295917|LOC100295917:XM_002688936:136_cdna Constitutive 0 NULL GeneID:100295917 7 GENE LOC100295917 NULL hypothetical protein LOC100295917 EMBV3_23788 AGTACTGAGAAAGAAAATCAAAGGAAGTCAGGGCTGGCATCAGACACGGGGCATCCCAGT Gene BVT0102_018163 - 0 NULL GK000013.2:40232332-40367548 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35855 CCATACCGGGAGATGGAGCATTTGAGACAGGTACCTGTTTCCTAGGCAACTGCTGATCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16485 GTCCGAGAGACAGGCGCTGCGAGATGGAGACAGCGTGCGGCGCGAGGTGCACTCCTACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36987 GCGGGCCTGCACCCTGTGGTTTTTGGTCATTTCAAGAACACATCATATTTGGAGATACTG Gene GeneID:100138312|ACSL3:XM_002685630:313_cdna UTR3_Alt 2 NULL GeneID:100138312 2 GENE ACSL3 NULL acyl-CoA synthetase long-chain family member 3 EMBV3_02225 CTCAGTGGCAGGAAATCCTCAACAGGGTCACCAACCAGCCCGCTCAATGCAGAAAAACTA Gene GeneID:338037|MYLK:NM_176636:20_cdna Constitutive 0 NULL GeneID:338037 1 GENE MYLK NULL myosin light chain kinase EMBV3_42541 TCTCGGGTGAGCTCAGGAGAAGCCTCTCAGACCAGTCCTGCGTGCCGCTGTGTCATGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07227 GAGCAAGGCTATGACGTCATTGCCTACCTGAACCAAGCGCCTCCAGGCCTCTACACAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36649 GCACAAATCAATTCTCAACTAGAAAACAGACCACCTATAGCTATTCAGGTCACACACCTG Gene BVT0102_107143 - 1 EMBV3_40184 GK000004.2:87919209-88193846 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27222 AGCCAGGCCGGAGCTGTTCCTCCACCACTCTGCTTGTGAAACTGAAGCAAAATATCTGAA Gene GeneID:614854|MIXL1:XM_002693978:218_cdna Constitutive 0 NULL GeneID:614854 16 GENE MIXL1 NULL Mix1 homeobox-like 1 (Xenopus laevis) EMBV3_17809 ATCAAGGATGAGCTGTTCGGGACTGTGAAGGTGAAGACAGAGATCAGCGTGGAGAGCAAA Variant GeneID:282024|TWF2:NM_001105324:43_cdna 514^618 1 EMBV3_35614 GeneID:282024 22 GENE TWF2 MGC148415 PTK9L twinfilin, actin-binding protein, homolog 2 (Drosophila) EMBV3_34199 GACTGCCGAGCAGGTTTTGAATGCTGACTGTTTCTTGCTACCAAAGGGAAAATCAATGCC Gene GeneID:781749|STK31:XM_002686857:53_cdna Constitutive 0 NULL GeneID:781749 4 GENE STK31 NULL serine/threonine kinase 31 EMBV3_21569 CCTTGGCTAGAAAATTCCATGGATGGAGGAGCCTGATGGGTTACAGTCATGGGGTCGCAA Gene BVV0101_023300 + 0 NULL GK000001.2:151651425-152203775 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00337 GGGATTTTCCCTTACATCCTTGATTCACAAGGGAGCCTGGAAACCTGACAGAGGGGAATG Gene GeneID:782450|TOR1AIP2:NM_001105647:240_cdna Constitutive 0 NULL GeneID:782450 16 GENE TOR1AIP2 IFRG15 MGC143037 MGC159772 torsin A interacting protein 2 EMBV3_26241 CTGACGTTGGTTTTTGAGTTCTGCGACCAGCTGCTGAAAGGCCTGGGCTTCTGTCACAGC Variant GeneID:281066|CDK5:NM_174017:556_cdna 304^375 2 EMBV3_18676 GeneID:281066 4 GENE CDK5 MGC140720 cyclin-dependent kinase 5 EMBV3_24784 TTTGGCGATTCCTGCAAGTTACCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAG Gene GeneID:538838|LSM14A:NM_001034654:703_cdna Constitutive 1 NULL GeneID:538838 18 GENE LSM14A MGC129061 LSM14A, SCD6 homolog A (S. cerevisiae) EMBV3_05592 CCAAAGTCCTGCAGCCCCAAACATGCAAACAATGATGAGCAGGGTATAACTTGGGTCACC Gene GeneID:789037|DNAJB7:NM_001099730:237_cdna Constitutive 0 NULL GeneID:789037 5 GENE DNAJB7 NULL DnaJ (Hsp40) homolog, subfamily B, member 7 EMBV3_21067 CACCAGCAGCAGCAGCTTACCAACCTGCAGATGGCGGCTCAGCGGCAGCGGGCACTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41637 AGATCCCACACACTGCAATGAAGATCGAAGAACCTACATGCTGCAACTAAGACCTGGTGC Gene BVT0101_050299 + 0 NULL GK000005.2:102168686-102201499 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07171 CCGCAGCCCGAAGATGAAATGGTTCGCCAAAACCGGAGTTTATTTCTGGAAAATGGAGGC Gene GeneID:613902|TTLL11:NM_001102272:207_cdna UTR3_Alt 2 NULL GeneID:613902 11 GENE TTLL11 MGC159457 tubulin tyrosine ligase-like family, member 11 EMBV3_39507 ACTGGAAAAACTACCACCGATGATGAGCTGGAAGAGATGCTGGAAAGTGGGAATCCCTCC Gene GeneID:519148|STX2:XM_002694458:68_cdna Constitutive 0 NULL GeneID:519148 17 GENE STX2 NULL syntaxin 2 EMBV3_27170 CCTCAAAGGAGGAGTGAAGATAGTTTTCTCGGTCCTGTATTAATAGGAAGTTCTCACGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07669 AACCATTGTTGCCATCTTCCCATCTCCCATGTTATATGCTGGCCCCACAGAGGTCCAGTG Gene GeneID:536409|PAPSS2:NM_001076075:37_cdna Constitutive 0 NULL GeneID:536409 26 GENE PAPSS2 NULL 3'-phosphoadenosine 5'-phosphosulfate synthase 2 EMBV3_28072 CAGGCTTCCATGTTGGGTTGAGCTAGTAGAGGCTTCCTCGGTTCTTACAGTATCTTTTGC Gene BVV0102_418414 - 1 EMBV3_32800 GK000004.2:31407463-31578310 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181150 TCONS_00181151 1 XLOC_110550 Coding TCONS_00181151 XLOC_110550 Coding Coding IL6 4:31576735-31583677 j TSS135669 2625 1 TCONS_00181151_4 295 0.167238095238095 5 0.622532776257023 5.69133704176125e-05 0 1.99283897008086e-11 0 0 0 0 0 0 2.59114095547564e-06 9.81523295358374e-10 1.34566039962534e-15 0 0 5.9298213193696e-08 0.00154292893833507 0.00189592240160574 0.00156738972592755 0 0 0 0.00177255557799398 0.00144471134797113 0.00176551487343644 0 0 0 0.000834928634025085 0.00026683432659415 0.000456628658954897 NM_173923.2 IL6 Bos taurus interleukin 6 (interferon, beta 2) (IL6), mRNA. 0.0 1874 100.00 0.395428571428571 NM_000600.3 IL6 Homo sapiens interleukin 6 (interferon, beta 2) (IL6), mRNA. 0.0 753 76.12 0.392 TCONS_00181151_4 sp|P26892|IL6_BOVIN IL6_BOVIN Interleukin-6; 3e-145 411 99.50 0.68135593220339 1 coding 0 0 0 0 0.041451832733969 0.749302810562874 0.00346681007370883 0.943822680192944 ACAGGATCTGCCTCTCAATTTAGAAAGTCAGTGAAAGAATGAATGACCTCGCGTTCCCCAATAGGCAGGTCCCAACATGTTGTTCACAAAACAAAACTTAAGTAAATTGATTTGTGTTTTAAATACCCTAGCTGAGGTCCCTGTTTTAGCAATCCTGACAAGATCCTCTTTGCAAAGTAAAGAAGTTGATTGTGATGTTAACACTGTGTTTTGTAAACAAAACATACAAAAAAAGAGGGCTTTTTTTTCCCTTGGTGTCATACAAGGGTCCTACTTGCAGTCTGGAACCAATCTTCTGAGCTGTCTGGATGTCTGGGAGACTGGGGGGAACGGCCTGGTATACAGATCTTCTGCATGAAACCAAGGACCCTCTTGCAAAAGATATTGTAAGAACCGAGGAAGCCTCTACTAGCTCAACCCAACATGGAAGCCTGAGGCATTGGAGGGGAAGTGTGATTCCAAACCCAGAGTCCTGTTCTATCAGTAGATTTCTTCTCAGTTGCCTCTGGATTCAAATCAAGTCATACAGCTATGAACACAAGCTCCAGAAAATGCCACAAGATCCTCCTCTGACATACTACCAAAGAGGCGCCTTCACTCCATTCGCTGTCTCCCTGGGGCTGCTCCTGGTGATGACTTCTGCTTTCCCTACCCCGGGTCCCCTGGGAGAAGATTTCAAAAATGACACCACCCCAGGCAGACTACTTCTGACCACTCCAGAGAAAACCGAAGCTCTCATTAAGCGCATGGTCGACAAAATCTCTGCAATGAGAAAGGAGATATGTGAGAAGAATGATGAGTGTGAAAGCAGCAAGGAGACACTGGCAGAAAATAAGCTGAATCTTCCAAAAATGGAGGAAAAGGACGGATGCTTCCAATCTGGGTTCAATCAGGCGATTTGCTTGATCAGAACCACTGCTGGTCTTCTGGAGTATCAGATATACCTGGACTACCTCCAGAACGAGTATGAGGGAAATCAGGAAAATGTCAGGGATTTGAGGAAAAATATCAGAACACTGATCCAGATCCTGAAGCAAAAGATCGCAGATCTAATAACCACTCCAGCCACAAACACTGACCTGCTGGAGAAGATGCAGTCTTCAAACGAGTGGGTAAAGAACGCAAAGATTATCCTCATCCTGAGAAACCTTGAGAATTTCCTGCAGTTCAGCCTGAGAGCTATTCGGATGAAGTAGCTGGGGCTCCCATGATTGTGGTAGTTCCTGGGCATTCCCTCCTCTGGTCAGAAACCTGTCCACTGGGCACACAACTTATGTTGTTCTCTATGAAGAACTAAAAGTATGAGCGTTAGGACACTATTTTATCTTTAATTTATTGATATTTAAATATGTGATTTTGAGTTAATTTATATACATGATAAGTATTTATATTTTTATGAAGTGCCACTTGAAATATTTTATGTATTTGGTTTGAAAAAGTAACGTAAAAATGGCTATGTGGCTTGAATGTCCTTATTGTTTTGGAGACAAATCATTTCTTGAAATGTGTAGGCTTACCTCAAAAAATTTGCTAACTTATGCATATTTTTAAAGGCATATTTATATTGTATTTATATAATGTTTAGGCTGTTTTTATAACAATAAACTTCTTTTTTAAAGAAAAAAAAGCAACTAAACCTCTGTGTGTGTCCCATGAAGCTTAGTATAAACAAGTTTCTGTCACTACCACCACCACTAAAACAAAAAGCTGCAGTCACCTGGAGGAAGATATAATTGAGCACCTATTGCATGCCAGGCACCAAGCACAATGAATTGCATGCATCATATTTAATCCTTGCATTTGCACACTTTTCTCTGGAGGTGGGAGAATAAGTGATTCCCTTAGTTACCCAGCTGAAAAGTAAACCACAGGCCCAGTCTTCCTGCCTCCAGGCTCCCTACTCTTAACCTTTAGGTCCTCCGCCTCACAGGGAACTGACAGATGAGGTAGAAAATCCCAAAAAAAATACAGGGAATACATTTTAAAGATGCAATCACACACCTTTAAGATGGTATAACCACTTACAGAAGACATAGCAATATGCAAGCTTCTGAATAATAACTAGAAGTTTTTATTCCTGGGTTCCTCAAACTGCACAGATCTGTCCATCACATCAATGACCATACTGTATCACATCTTAAAATGGGTGGATTTTTCTTTCCAGTCAGCATATGGGTTCCACAAGAAGGAAGACTCTATTTATTCATCTTTGCATCCTGAGCCCACAGCCCAGAACATGAATATTCAATTCAGTTCAGTCACTCAGTCGTGTCTGACTATTTGTGACCGCATGGACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCTGGTGTTTACTCAAACTCATGTCCACTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCTTTCTCCCACCTTCAATCTTTCCCTGCATCAGGGTCTTTTCCAATGAGTAAGCTCTTCGCATCAGGTGGCCAAAATATTGGAGTTTCAGTTTCAGCATCAGTCTTTCCAATGAATATTCAGGACTATTATCCTTTAGTATGGACTGGTTGGATTTCCTTGCAGTCCAAGGGATTCTCAAGAGTCTTCTCCAACACCACAGTTCCAAAGCAACAATTCTTCAAC EMBV3_43256 AAAAGTGTTGGATCTCGGTTGTGGATCAGGGTTGCTCGGTATAATGGCACTCAAGGGAGG Gene GeneID:783955|C16H1orf156:NM_001080356:123_cdna Constitutive 0 NULL GeneID:783955 16 GENE C16H1orf156 C1orf156 MGC137286 chromosome 1 open reading frame 156 ortholog EMBV3_33531 GACTATGCACCACCTCGCTGGGCTCGGCAGGTTTGAACAGGCCATCCAGGCAGCCAGCCG Variant GeneID:505847|CDC25B:XM_002692382:288_cdna 420^578 2 EMBV3_18034 GeneID:505847 13 GENE CDC25B NULL cell division cycle 25 homolog B (S. pombe) EMBV3_05766 CAGCTCCAAAGTATTTTTGGGCAGTTTGATACCTTTTATATCTGGAGCAGCCTTAACCAG Gene BVT0102_048749 + 0 NULL GK000002.2:19326231-19340432 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104577 TCONS_00104575 TCONS_00104578 TCONS_00104576 TCONS_00104579 TCONS_00104574 1 XLOC_062410 Coding TCONS_00104579 XLOC_062410 Coding Coding AGPS 2:19339166-19433176 = TSS77399 3599 1 TCONS_00104579_2 568 19 0.961918539714283 0.00997677922511081 0.0102957379089334 0.00783335301991975 0.00911152244952381 0.0104925815670131 0.00634104764657716 0.00988744440861833 0.00776536584788389 0.018236159840577 0.00330489377920496 0.00113381178624109 0.000832282909611108 0.0027565458918917 0.00504571893697905 0.00453811874030341 0.014672923987799 0.00822756053643399 0.0180849137705274 0.00987068795084814 0.00826694967526152 0.00328953883689673 0.00607595765561145 0.00907927176535566 0.0106584144244898 0.00860137619866154 0.00853213029846325 0.00613555747282111 0.00133477349411813 0.00087134179753697 0.00218314052603065 NM_001206719.1 AGPS Bos taurus alkylglycerone phosphate synthase (AGPS), mRNA. 0.0 6482 99.94 0.999722145040289 NM_003659.3 AGPS Homo sapiens alkylglycerone phosphate synthase (AGPS), mRNA. 0.0 4589 88.97 0.985829397054737 TCONS_00104579_2 sp|O00116|ADAS_HUMAN ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal; 0.0 1178 98.06 0.998239436619718 2 coding 0 0 1 0 -0.0226669708608408 0.892044111693008 -0.200232562743699 0.0086958342961379 GGCAAGAAGTTATGAAATGGAATGGATGGGGATATAATGATTCCAAGTTCATCTTCAATAAGAAAGGACAAATTGAGTTGACTGGGAAAAGGTACCCTCTTAGTGGCATGTCATTGCCAACTTTTAGAGAGTGGATCCAAAATACCCTTGGAGTAAATGTGGAGCATAAAACTACCTCTAAAGCCTCCTTAAATCCTAGTGATACACCTCCTTCTATTGTAAGTGAAGATTTTCTTCATGACCTTAAAGAAACTAATATTTCATATTCACAAGAAGCAGATGATCGAGTATTTAGAGCTCATGGTCATTGTCTTCATGAGATATTTTTGCTCAGGGAAGGAATGTTTCAGAGAATTCCTGATATAGTTTTATGGCCAACATGTCATGATGATGTAGTTAAGATTGTGAATCTAGCGTGCAAATATAACCTTTGTATCATACCAATTGGTGGAGGAACAAGTGTTTCGTATGGCCTGATGTGTCCTGCAGATGAGACAAGAACAATTATTTCTTTAGACACTTCACAAATGAATCGTATCCTCTGGGTTGATGAAAACAATCTGACAGCTCATGTAGAGGCTGGCATAACAGGACAAGAATTGGAAAGACAGCTTAAAGAAAGTGGTTATTGTACAGGTCATGAACCAGATTCCCTGGAATTCAGCACTGTGGGAGGATGGGTATCTACTCGAGCGTCAGGCATGAAGAAGAATATCTATGGCAATATTGAGGACTTGGTGGTTCATATAAAAATGGTAACACCTAGAGGTATAATAGAAAAAAGCTGTCAAGGACCTCGAATGTCAACAGGCCCTGATATCCATCACTTCATCATGGGATCTGAAGGAACTCTTGGTGTGATAACAGAAGCTACAATAAAAATCAGACCAATTCCTGAATACCAAAAGTATGGCTCAGTAGCTTTCCCTAATTTTGAACAAGGAGTAGCCTGTTTAAGAGAAATTGCAAAACAGAGATGTGCTCCTGCATCTATTCGCCTAATGGACAACGAGCAGTTTCATTTTGGTCATGCGCTTAAACCTCAGGTTTCCTCTATCTTTACATCATTTTTGGATGGATTAAAAAAGTTTTATATTACAAAGTTTAAAGGATTTGATCCAAATCAGCTAAGTGTCGCTACATTACTGTTTGAGGGGGACCGTGAGAAGGTTCTTCAGCATGAAAAGCAAGTGTATGACATCGCTGCAAAATTTGGGGGATTGGCAGCTGGGGAAGATAATGGACAGAGAGGTTATTTGTTGACCTATGTCATTGCATACATTCGAGATTTGGGTTTGGAATACTATATATTAGGAGAATCTTTTGAGACTTCTGCTCCTTGGGACAGGGTTGTAGATCTCTGTAGAAATGTAAAAGAAAGAATAACAAGGGAATGCAAAGAGAAGGGTGTTCAGTTTGCTCCTCTTTCTACATGCAGGGTGACACAGACTTACGACGCAGGTGCGTGTATCTATTTCTACTTTGCCTTTAACTACAGGGGAATCAGTGATCCACTGACTGTGTTTGAACAAACAGAGGCAGCTGCTAGAGAAGAAATCCTCGCTAATGGAGGGAGCCTGTCACATCACCATGGAGTGGGCAAGTTACGGAAGCAGTGGCTAAAGGAAAGTATCTCTGATGTCGGCTTTGGGATGCTGAAGTCTGTCAAGGAATATGTGGACCCCAATAACATCTTTGGAAACAGAAACCTTTTATAAATCCATTACTATTGATAAGAAAAATGTCACTTTTATTTTAAGTCTTTAACTATGGTTATACCAGTAATCAAATATATCATGGACTTTTATTTCAGCTGCATTTGTTTGTTGGTTTAAAATAAGTTTGTTTCATTCTGTAGTTTGTTTTGTTTCTGCATCTATGGATTGACAGATGGTATTCCTAAATCTCTCTCATTGTAGGTGCATTAGTTTACAGCCAACTGGTTGTCATTTCAAATTTCAGTCAGGCAGCACAAGGCTGGCTCCCAGTTGTTATTTCAGAGGAGGATGCTACCAGCTGTTTTGTATTGATGTTTCTTCTTGGGGAACAAAGGCAGATTTTGGTGTCATCTATTGTTTCTCTAGCCCCCTTTTTAAAAGGTTTCTGGGAAGCAGCTATGTAGGGAAGGATTCCACTGAGGAGTTATATACATGTATTTTTTTTAAGAGTGCATTACTAGTGTGAGTAGGCCATTAAGGGAGAATACCCATCAAAGAGTATAGGCAGCCTCTTACTTAGGATGCCTCCAGTTCTGTAAGATGATTGGCCTACATTTTTCTTTGAAATTAGTGTCCAGTTATGAAACCTTAAATCATCAGGATGATTATTCTGTCAGGGGACATCTTTTGTTCTCCATATTTCTGTTTCTCCTGGGGTATGAGTTGAATTTGTATCACTGAGATAATGCATGGTTATATCCTAATTCATTCTTTATATGTTTTATAAGGAAAGCCAATGTCTCATTCATTGTATGTGAAGAAAAAGGTTTACCATGAAAGAAATGCCTTTATTCAATTTAGAGTACTGATGTTTCTCATTTCACATTCTTGTTGCTGAGATTCAGAAGAAGCTGCAATAGGAGCAGAAGAGGAAGACTCCTTACACTGAATGTCTCCAGTTCAAAGAATTGTTTGGCTAAAGAAACGCAGTCATCATTCAGCTACTGAAATATGAAAACCTCAATAGTTTTAATGAGAAAAAACTTTTTGTAAAAAAGCCCAAACAACATGAAAAATTTCCATATAAAAGTAAAGTTTCAATTTCGTTTTTAATAATGGTTTAATGCCTTTTTTGAATTACTGGTTTAACCTAAATTTTTAAAACAGTAGTTACTAATACACATGCCATAATAAAATGTTTGAAATATCATATTTCTGAAATAATAGAACATTAACCACATATAGCAAACATTTTTACATTCAAACATGCATATTAAAATAGTTACTTTGAATCACTGTCAAGGTTCATGATTCACATTTTGAGATGGATTCTTTTATTAATGCAATACCTAACTTTTGATAATTTTTTTAAAATTAATATTTGATCAGTTATGTCAGTCAAAATGCAGACGAGCCTTTAAAAGGACACACTGTCTGTCTATGTAGCAACAGCTCCAAAGTATTTTTGGGCAGTTTGATACCTTTTATATCTGGAGCAGCCTTAACCAGAAAAGCCAAAATCTAAAACTGACAAAGTGATATGTTAAGACTTCAAAATGATAAATAATTTTTAACAAAATTGGCCTCAAACTAATAAAATCTGTAAGCAAATAAAATTGAACTATTAGTTTAACAGAAACACAATATTTATGAGATGCTGCCTCTCTTCATTGGTGATTTATTTTTAATTATAAAATTTGCAGCAGGTCTTTGCTTCAAGCCCTTGATATTTGAAATAGTTGGTTACCTGATGAAGGAAGTAACACTTGCTTCTAGGGTTATAAGAATCTCAGCTTTACAAAATGCATCTATTCATGAAACTAACTTCTCTAATTGGTGATCAAAATGTAAAATTTAATACAGTACTAATATCTCACTGACGTGTATACATGTTTCTGAGTAATATTTTTACAATAAAACATAGATTCATAAGCAGATCCA EMBV3_09207 ATCCAGTGAAAGGTCAAGGTCCAGTGAAAGGTCAAGGTCCAGTGAAAGGTCAAGGTCCAG Gene GeneID:783871|PI3:NM_001080353:1387_cdna Constitutive 0 NULL GeneID:783871 13 GENE PI3 MGC148792 peptidase inhibitor 3, skin-derived (SKALP) EMBV3_27141 AAGCGTAATTTGGACCTCTTTGTTGTCAGACATGAATTGGCCATAATGAGACTAGCTGCC Gene GeneID:535814|ZDHHC21:NM_001081534:3_cdna UTR3_Alt 2 NULL GeneID:535814 8 GENE ZDHHC21 MGC155155 zinc finger, DHHC-type containing 21 EMBV3_01478 CTGTGCTAGAGACCAGTGTTTTGCAAAGTGGGTGACATGGTGATCCCAGAGTCAGTAACT Gene BVT0101_061618 + 0 NULL GK000016.2:29773643-29832590 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066960 1 XLOC_041325 NonCoding TCONS_00066960 XLOC_041325 NonCoding NonCoding - 16:29773960-29775149 - TSS50470 1189 1 TCONS_00066960_1 34 1 0 1.1442981375143e-05 0 0 0 4.15238221911419e-06 0 0 0 0 0.00040141401883405 2.6954253653233e-05 1.80438234043731e-05 9.65274795563193e-06 0.00143216636167259 0.000157831621954269 0.000888533268279108 0 0.000358742826582496 0 0 0 0 0 0 0 0 0 0 8.16586790799552e-06 0 0 noncoding 0 0 0 0 0.0360717839335788 0.749849270828242 0.0155243716814505 0.749914589796606 AGAAGGTAACTGAGTACTTCCTTGTGCCTCAAGCTTCAGACCTTTCCCTTCTATCCGTGTAGTTATTTTTGGGTCACAGGGAATCGTGGCCTGAGAAGGCGCTGCTCCCTGGGGGCCTGAGAAGGGAAGCTGCAGTCGCGGAAGCGGTTTTGGGGGGCTGCTTCCTCTGCTCTGGGGAGCTCCCCGACTCTAGGGGCAAGGGAAACGGAGGTGGGGAGGTTTCTAAACAACAGCTCTGGGCGGGTTTTTCCTCCAGGTTTACCAAGCCTTCTCTTCCTTTGCGGAAACTGCCAACCTCTCGGTTTCTGCCAGCCACGCTCAGTTTATTCGTATTTCCGCCTGTTTGCGCTCTGCGTTATCTTCACTTCAGCTCGGTTTTCAAAATATTTCACAGCAAGTGGGCCCTTGTGAAAGGCAGTGGCAGGAGCGACGCTTATAGTGATGCTGCTCTGAAAAACCCTGCCATAACTTTTATTCCGCACTATGGAAACACACTCGCACATATTTGCATAGTCTAAGGCTCTGGGAATCTGAAGAAATCCCTTAATGTTTTAATATGCTGAGGTTATGGTATTTATAAAATCCTGAGCAATTTAAAAGCCACGAGATAGGAGGGTTCTTAGGAAATATCTGTACCTATTAAGCACGATTGTATCAGTCCACAGAATCAAATTCTCTGCGTCTCAGATCTTTAGCAAATGAAATTCAGCTAAAGGGAAAGCAACGAAGAATTCAGAAATCGTTTTTACTGGTGGTATGAACAATAGAATTTCAAGACTTCTGAAGTTACAGATTCCGTTGTCTTTATTTCACTTTCATAGAAAAATGAGAAAGGGCCTCCATGGGAATGTCAGGAGATAAAGAAAAATTACACAAAATAATAAAAATACTGTGCTAGAGACCAGTGTTTTGCAAAGTGGGTGACATGGTGATCCCAGAGTCAGTAACTGTCTCACCAAGTATTTATCTTCTAACAAGGGAAGTCCACATTGTTTGTTACTAACATTATATCTAGCCTTTCCAAAACCTCCAGTTTAAATTAAATTGTTCCTTCTTTATCCCTTTCTTGCATTTAAATTCCTATTGTTAAAAATCCCAAGTATTAAAAAAAAAGTATTGAAAAGGCATTTGTCATTTAAAATATGCAATAACTATTATTAACTTTTCAAAGACAAATCTCCTGAGTAAT TCONS_00068941 r 5' 250 TCONS_00068941 r 5' 250 EMBV3_30184 GGGTGCCATTGCCTTCTCCGAAAACATTACAATAGCATCCTGAAAATAGATCCTGGTGAG Gene GeneID:514623|URB2:NM_001102004:5_cdna Constitutive 0 NULL GeneID:514623 28 GENE URB2 MGC151695 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) EMBV3_35524 CCTTTGCCTGACAACTCCCTGCTGTCTTTTGTCTTAGTTAATATATTTGTCAGCTTGCAC Gene BVT0102_407611 + 0 NULL GK000021.2:55976316-55977101 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121629 TCONS_00121628 1 XLOC_073445 Coding TCONS_00121628 XLOC_073445 Coding Coding MFAP1 21:55975627-55988539 j TSS90551 3486 2 TCONS_00121628_3 284 0.0238095238095238 9 0.730694756409263 0.00215082079386321 0.00263165460649606 0.00246051177542978 0.00179083966622398 0.00256564979262732 0.000493903890936828 0.0018871356628921 0.00224726542328569 0.00350634953052579 0.000596678544380282 0.000373897713413375 0.000271069233912685 0.00092402069514844 0.00280834933801001 0.000702560348808383 0.00246540610366879 0.00191493216346293 0.00111144435805907 0.00296764358762937 0.00256745334744101 0.00150889428819891 0.000787293909052704 0.0008355277550752 0.00174378792053885 0.0017874775275479 0.000685173834134046 0.00136209672527139 0.000411225215167224 0.000281816669360207 0.000609289969827412 NM_001034397.1 MFAP1 Bos taurus microfibrillar-associated protein 1 (MFAP1), mRNA. 0.0 3416 98.97 0.555938037865749 NM_005926.2 MFAP1 Homo sapiens microfibrillar-associated protein 1 (MFAP1), mRNA. 0.0 2513 86.88 0.590074584050488 TCONS_00121628_3 sp|Q5EA98|MFAP1_BOVIN MFAP1_BOVIN Microfibrillar-associated protein 1; 2e-167 476 97.92 0.838028169014085 1 coding 0 0 0 0 0.841358205457336 0.0370819019771127 -0.00474287834669072 0.957897239548394 CACAATCCTCTGGTCGTATACTTCCGGTTATTCTAGCTCAGCCGTAGGTGGTGTTTCTTTCTATCAGTCGCGCAGCAGTTTCCAGTGGTCCTAGGAGCAGAGGGTTTTATCTGTTCGTTGACATTGTAGCTGTTCACTTTGAAATCAGTCGACTTTCGGGAGTCACCGACGCTGTCGTCAACATGTCTGTCCCAAGCTCACTCATGAAACAACCGCCCATTCAGTCAACGGCTGGGGCCGTCCCGGTTCGCAATGAGAAAGGTGAGATTTCGATGGAAAAAGTGAAGGTAAAACGTTATGTGTCGGGAAAGAGGCCAGACTATGCCCCTATGGAGTCCTCAGATGAGGAGGATGAAGAGTTTCAGTTCATTAAGAAAGCCAAAGAACAAGAAGCAGAGCCCGAGGAACAGGAGGAGGATTCATCTAGTGACCCTCGGCTGCGGCGTCTGCAGAACCGTATTAGTGAAGATGTGGAGGAGAGATTGGCTCGACATCGGAAAATAGTGGAGCCTGAAGTGGTTGGAGAAAGTGACTCCGAAGTAGAAGGAGATCCTTGGCGCATGGAACGAGAAGATAGCAGTGAAGAAGAGGAAGAAGAGATTGATGAAGAGGAAATAGAGCGGCGCCGTGGCATGATGCGCCAAAGAGCACAGGAGAGAAAAAATGAAGAGCTGGAAGTCATGGAGGTGGAAGACGAGGGACGTTCTGGGGAGGAGTCTGAATCAGAGTCTGAGTATGAGGAGTACACAGACAGTGAGGATGAGATGGAGCCTCGCCTTAAGCCAGTCTTCATTCGGAAGACCTCTGTGCTGCAGGAAGGACCGGGTGACGGTTCAAGAACGTGAGGCTGAAGCATTGAAACAGAAGGAGCTGGAGCAGGAGGCCAAACACATGGCTGAGGAGAGGCGCAAGTACACACTCAAGATTGTAGAGGAGGAAACCAAGAAAGAGCTGGAGGAGAACAAGCGGTCTCTGGCTGCCCTGGATGCACTCAATACTGATGATGAAAATGATGAGGAGGAATATGAGGCCTGGAAAGTTCGGGAGTTAAAGAGAATCAAGAGGGACAGAGAAGACAGAGAAGCACTTGAGAAGGAGAAAGCAGAAATTGAACGAATGAGAAACCTAACTGAGGAAGAGAGGCGAGCTGAGCTTCGGGCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAGGGCAAATATAAGTTCCTACAGAAGTATTATCACCGGGGTGCCTTCTTCATGGATGAGGATGAAGAAGTATACAAGAGAGATTTCAGTGCACCTACCCTGGAGGATCATTTCAACAAAACCATTCTTCCCAAAGTCATGCAGGTCAAGAACTTTGGACGCTCTGGTCGTACCAAATACACCCACCTCGTGGATCAAGACACCACCTCCTTTGACTCAGCATGGGGCCAAGAGAGTGCCCAGAATACAAAGTTCTTTAAACAAAAGGCAGCCGGGGTACGAGATGTATTTGAACGGCCATCTGCCAAGAAGCGGAAAACTACTTAGAGTTCAACTACTTATTCTTCCAGCTGTTGGACACAAGGGGAAATCTCAGCATCTGGTCCTTGATTTGTTTTTACTACTGTTCACATGGCCCCTGTATCTGGCCTGCTGAACCTACTGCCATACTTGTGGCACTGGGCAAACCCAGTGTTTGAAAGTGCTTTGTGAGGTTTGGACTCATGCCGAGAAGCCTGCAAAAAAGCACTGTCAGGTAGGATTAGAGGCTCCCACTTAGGACTATTTCTGAGAAATCTTGAATGTCATTACTGCTCTGGCTTCCCATATTCACTTGGGACTGTTCCAAGTTTCTTCTACCAGCTCTGAGCTTGGGTTAGAAACATGGATGGGCATCTAAGTGGACAATGTATTATTTCTACCTTACAGGAAATCTAAAGTCATTGAAAACCTGTTTTGCATTTTTGGGTAAATTTTTCTAGGCAAACATACTTTTTGATCCATTTATGTGCAAGTGTCAAGAAATAAAAAAATCATACACCAAGAGGTTTTTTTAGCATATCAGAAATAAAATGTGCAAGCTGACAAATATATTAACTAAGACAAAAGACAGCAGAGAGTTGTCAGGCAAAGGATGTTTCACATTTTAATCATACCCTTTCATCTCAGGAATAAGCACAGATGCAAGATAAGCTATATTGTAAGTGGCACCTAGATTTATTCCATGAGCAAATATGTGATTGTCATTGCTGTCTAAATCGTAGCTGTATATAGAAAACAGGACACACAAAACACAGAATCCAAGCAGCACACCAGTACCTGCTTGCCCGGCTCGTGTACCAAGGAGGGCACAGTGCTCTTGAGCTGGAATGTAGTGACATCACTGGCAGAGTTACATTTTTCATTTAATATGTACTACATAACCACCCTGCATACGGCAGAACATTAGGAGGCCTGGGGGTTATAAAGAATGACATTTAACCAGTGGGAAGACGTATCTATATTGCATTTAAAAATGAGAAGGGCAAGGTCTTTTCACAGTCTTTCAATGCCCCACTAGGAGAATCATCCATAAATCCCTAAATGTCCTAGAATAAAAATGAGTGCAAATAATTACTATGAAGTAATAAACACAAAGATGTATGTAAGTCACTGTTGTATGTGCCAGGAGATACAATCTAAGAATTATCCTAGAGTCAAAATGAAAGTCAGAGCTACTGGCCTGCTCATCACTTCTTAAAACAATCTATCAGATATGTATCATTTTACAGCTGAGGAAACAGAAGCTTAGCAAGGGTGACTTGGCCGAACTTGATCAACTTTTAAACTGCTTTCTCTCTACGTTAGAAAATGCAATCTCAAGGTGTAAGTGCTGTGGTTCAGAATTAAAATATTAAATCAATTAAAATCTTTTCATAAATTAATTCTAAGACATAACCTTTGATAATTTCTTATTGAAGTTACCATGTTCCCACCTCAGTACCTAAACTGTAACTCACAGTGGCTTATGAACTGGATTGGTGACTTTTATCTGTATACAGTGGCTCCTAGACAGGTGTTGGCCTTTCAGCTATTGGTGAGCTACCCTAGAGACACATGCCATGGGGTAAACTTTACTGAGCCAATTAGTGCACCTTGAATATTGCTGAGAATTAGTCATATGAATGAGCCTGGTCTGCTACCTAACATCTGAACATGAGTTACTCTTCTACACTGATCCTCAACATAGGTTCATTAAGGGTTATACTCCAAGATGTAAACTTCCCACAGTAAAATAAAATATGCATCATACTTGGTCCAAAATGATAAAACTGAAACTTAAAAAAGACGTCTTTATTGAAATAAGTTAATGCAGTGGGCCTGAGAAAACCCACATCAGTTGGTTAGGGCAATAAGAGCTTCCACCACGTTGCCCATGTGTTCCCTCAAGCTCCGTTCTGCTGCTGCTCGGGAGATCTCCATCTCTGTCATCTGCAGGGAAAGGATCAATGATTTTACCGAAGTCTCCTGGGCAAT EMBV3_20626 TTTTGTTTGCACTCACTACACACCCCCACGGTGTAGAAACCTCCACAGAGTCAACCAGAC Gene GeneID:534832|KIF13A:XM_002697576:428_cdna Constitutive 0 NULL GeneID:534832 23 GENE KIF13A NULL kinesin family member 13A EMBV3_33801 GCCTACCTCTTTCATATTTTGGGTTCCTCACCGCTTCAACCTGGATTTGGGATATCGGGG Gene GeneID:525725|COL28A1:XM_002686669:132_cdna Constitutive 0 NULL GeneID:525725 4 GENE COL28A1 NULL collagen, type XXVIII, alpha 1 EMBV3_15092 GGACAGGAATCGCAGAGAAAACCCACACACCTATGAAGCCAAGATCCTTCCCAGAAATGT Gene GeneID:100337425|LOC100337425:XM_002699018:74_cdna Constitutive 0 NULL GeneID:100337425 29 GENE LOC100337425 NULL hCG1990491-like EMBV3_17461 GACACCTCAGCTGGTTAAGAATCTGTCTCCAATGCAGGAGACCCCAATCAATTCCTGAGT Gene BVV0102_300053 + 1 EMBV3_07774 GK000030.2:68305522-68428001 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05239 TATTCCCCCTATTTGACCGGGGAGGAAATCTGAGGCTGACGGAGTAAAGTGAACTTCTGG Gene BVT0102_020937 + 1 EMBV3_33467 GK000005.2:104262268-104273437 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196217 TCONS_00196216 TCONS_00193152 2 XLOC_118269 XLOC_117399 Coding TCONS_00196216 XLOC_118269 Coding Coding NCAPD2 5:104244557-104273251 j TSS146057 5179 1 TCONS_00196216_6 1397 0.0245221085151574 32 0.82061826926428 0.000578955033554387 0.000197342827265149 0.000123196757590142 0.000152555504371169 6.61095248149584e-05 0.000138440433618754 2.61191221652908e-20 0.000168360691240656 3.20091349245765e-08 2.02368058024308e-18 2.71059084994023e-16 3.26969750272663e-14 8.73516556269028e-05 6.36759276228735e-05 9.63396234931779e-09 0.000126615128015199 2.24635995341167e-15 9.9127518851947e-05 1.1384616104804e-16 0.000702397108048536 0.000168213204403141 1.46132214671361e-39 9.80487090392675e-05 4.06073923287808e-05 7.71597571242637e-05 0.000223696269404608 0.000178788688822067 0.00010800377625607 2.46341944218502e-05 0.000120259123062692 NM_001206711.1 NCAPD2 Bos taurus non-SMC condensin I complex, subunit D2 (NCAPD2), mRNA. 0.0 8217 99.80 0.883954431357405 NM_014865.3 NCAPD2 Homo sapiens non-SMC condensin I complex, subunit D2 (NCAPD2), 0.0 5054 86.56 0.814636030121645 TCONS_00196216_6 sp|Q15021|CND1_HUMAN CND1_HUMAN Condensin complex subunit 1; 0.0 2485 87.08 0.999284180386543 4 coding 1 1 1 1 0.00570171549663933 0.967065036718438 -0.0141650837980185 0.839229932063503 CACCCGTTCTTATTTCCTTGGGCGTCCCTCAACTGAGGGAGATGAAGGTCCAGAACCTGGAGCCCAGAGCTTCCTTTTTCCGTGCCCCACAGCAGTTTTGCGCTATAGCTGTTTTTATTCCCCCTATTTGACCGGGGAGGAAATCTGAGGCTGACGGAGTAAAGTGAACTTCTGGACGTCACATAGCAGACGAGATGGCGGAAGCTGGACTAGAGCCTAAGCCTTCTAACTGTCGGCTTCTGTCCTCGGGGGTGACTGAATGGGTCACTGTCCCAGGGGCACGGCCACTGCTCAGCTAGGAACTCGACTCCTCCAGCAGGCACCGCGGAAAAAGAGGACTTTGTAGGGAAGAAGGCGGCCGCGAGTGCGGCGTGGGTGGGGGAGGGAGCTGGAATCTAAGTCCCGCCCTCCTTGGGCAGTCGGCTCCTGCGCTCTGATTGGTCGGTCTCTGCAGCGAGCGTCGCGATTGGGTCCCTTGCGGCCGTTGAGATTTGAACTCCACTTTTGTGGCTTTGCCCGCGCCGCGCGGGGCTCGGTGACGGGTGTTTTCCTCTGCCTGGCGTGTATTGCCCAGTTTCTCTCCCCGCGGGAGTGCTGCCTCGCATATTGGTGCATATTGTGCCCTCCGTGGGGTTTTTTTGTTTTTGTTTTTAATTCCAGCCCCACGACGCGAGTTGGAGGAACGGCGGGTGAAGCTCTCTTGTAAGCCCTGTGAGCCATTGGGAGAAAGATGTCTCCCCAGGTATGGGAATTCCATCTGCCCTTATCCCCAGAGGAGTTGTTGAAAAGTGGAGGGGTGAATCAGTATGTCGTGCAAGAGGTACTGTCCATCAGACATCTTCCATCGTACCTTAAAGCTTTTCAGACCGCCTTTCGAGCTCAGGGGCCCTTGGCCGTGCTGGAGCATTTTGATACCATCTACAGCATCCTGCATCACTTTCGAAGTATAGACCCTGGCCTCAAGGAAGACACACTGGAATTCCTCATAAAAGTGGTGTCCCGCCACTCCCAGGAACTCCCTGCCATCTTGGATGATGCAGCTTTGAGTGTGTCAGACAGAAGCGCCCACCTGAATGCCCTCAAGATGAACTGCTATGCTCTGATACGCCTCTTGGAGTCCTTTGAGACCACGAGCAGCCAGACGGGTCTCATGGACGTGGAGCTAGGCGGGAAGGGTAGGAAATCCCGGGCCAAGGCAACCCATGGCTTTGACTGGGAGGAAGAGAGGCAACCAATTCTTCAGCTTTTAACACAGCTGCTCCAGTTGGACATCCGTCACTTGTGGAACCACTCGATAATCGAAGAGGAGTTTGTCAGCTTGGTTACTGGCTGCTGCTACCGCCTCCTGGAGAACCCCACCATTAGTCACCAGAAGAACCGCCCTACCCGAGAAGCCATAACGCACCTGCTGGGTGTAGCTTTGACACGTTATAACCACATGCTGAGTGCCACTGTGAAGATCATCCAGATGCTGCAGCACTTTGAGCACCTGGCATCCATCCTGGTGGCGGCTGTGAGTCTTTGGGCAACTGATTACGGAATGAAGAGCATTGTAGGAGAGATCGTAAGAGAGATTGGACAGAAGTGTCCCCAGGAGCTGAGTCGGGACCCTACGGGGGCAAAGGGTTTTGCGGCCTTCCTGACGGAACTAGCAGAGCGCATCCCAGCCATCCTGATGTCCAGCATGTGCATTCTGCTAGACCATCTGGATGGAGAGAATTACATGATGCGCAATGCTGTGCTGGCGGCCATGGCAGAGATGGTGCTGCAGGTCCTGAGTGGGGATCAGCTGGAGGCGGCATCCCGGGACACCCGGGACCAGTTCCTAGACACTTTGCAGGCCCATTGCCACGACGTCAACTCCTTTGTGCGCAGCCGCGTTTTGCAGCTCTTCACCCGAATCGTCCAGCAGAAGGCTCTGCCCCTGATGCGTTTCCAGGCAGTGGTGGCCTTAGCTGTGGGGCGTCTGGCAGACAAGTCGGTGCTGGTCTGTAAAAGTGCCATCCAACTGCTCGCCAGCTTTCTTGCCAATAATCCCTTTTCCTGCAAGCTTAGTGACACTGACCTTGCTGGACCACTGCAGAAGGAGACCCAGAAATTACAAGAGATGAGGGCCCAGAGGCGAGCCACAGCGCCTTCCGCAGAACTAGACCCCGCTGAGGAGTGGGAGGCCATGCTGCCAGAGTTGAAAGCTACCCTGCAGCAGCTGCTGATGCTTCCCCAGGAAGGAGAGGGGATGTCTGAGGGCGTTGCCGAGACAGAGACCCCCGAAGAGGTGGAAGGACGAATCCGTCAGTTGCTAGCCAAAGCTAGTTACAAGCAGGCCGTCATCCTCACTCAGGAAGCCATGGGCCGCTTCCAGGAGTCTGAACCCTTCTGTCATGTGGACCCGGATGAGTCAGAGGAGACCAGGTTCCTCAGTCTCTTAGGAACCATCTTCAAAGGCCCAGCAGCTCCCACCCAGGAGGAGAATCCCCAGGCGGCTGCAGGGAACTTGGGCCCAGGAGAGACTGGCTGTAAGGACAAGCCCAGTGGGTCAGAGCCTGAGGAATGCAGTGATGAGCTGGTGAAGCAGGAGTTGCTGGTGCAATACCTACAGGATGCCCACAGCTTCTCCCTGCAGATCACCAAGGCCATTGGCATCATCAGCAAGATGATGTACGAACACACGACGACAGTGGTGCAGGAGGTGATTGAATTCTTTGTGATGGTGTTCCAATTTGGGGTACCTCAGGCCCTGTTTGGGGTGCGCCGCATGCTGCCTCTCATCTGGTCGAAGGAGCCTGGTGTCCGGGATGCTGTGCTTAATGCCTACCGCCAACTTTATCTCAAACCCAAGGGGGACTCCGCCAGAGCCAAGGCCCAGACTTTGATTCACAATCTCTCTCTGCTGCTGGTGGACGCCTCAGTTGGGACCATTCAGTGTCTTGAGGAAATCATCTGTGAGTTTGTGCAGAAGGATGAATTGAGCCCAGCAGTGACCCAGGTGCTGTGGGAGCGGGCAACCGAGAAGGTGCCCTGCTCCCCTCTGGAGCGCTGCTCCTCCGTCATGCTGCTTGGGATGATGGCACGAGGAAAGCCAGAGATTGTGGGAAGCAACTTGGACACCCTGGTGAATATAGGGCTGGACGAGAAGCTCCCACCGGACTACAGGTTGGCCCAGCAGGTGTGCCACGCCATCGCCAACATCTTGGACAGGAGGAAGCCTTCTATGGGCGAACGTCACCCTCCCTTCCGGCTGCCCCAGGAGCACCGCCTGTTTGAGCGGCTGCGTGAGATGGTCACGAAAGGCAGCATCCACCCAGACCCGCTCTGGGTCCCGTTCAAGGAGGCGGCTGTGGCCCTCATCTACCAGCTGGCTGAGGGCCCCGAGGTGATCTGCGCCCGGATACTGCAGGACTGTGCGAAGCAGGCCCTGGAGAAGTTGGAGGAGAAGAGTGACCACCAGGAGGCCCCCCAGGAGACGCCCGTGCTCCCCACCTTCCTGTTGATGAACCTGCTGTCCCTGGCCGGGGACGTGGCTCTGCAGCAGCTGGTGCACCTGGAGCAGGCTGTGAGCGGAGAGCTCTGTCGGCGCCGAGTCCTGCGGGAGGAACAGGAACACAAGAGGAAGGAGCCCAAGGAGAAGAATTCAAAGTCTGAGTCCACCTTAGAGGAGGAGATGGGGCTGGGTGGGGCCACAGCTGATGATACTGAGGCAGAACTCATCCGCGGCATCTGTGAGCTGGAGCTGCTGGAAGGCAAACAGACACTGGCTGCCTTTGTTCCACTTCTGCTTAAAGTCTGCAACAACCCTGGTCTCTATAGCAACCCAGAGCTCTCCACAGCGGCTTCACTCGCGCTGGGCAAGTTCTGCATGATCAGTGCAACTTTCTGTGACTCCCAGCTTCGTCTTCTGTTCACCATGTTAGAAAAGTCCTCATTCCCCATCGTTCGCTCTAACCTCATGATTGCTACTGGGGATCTGGCCATCCGCTTTCCCAACCTGGTGGACCCCTGGACACCCCATCTATATGCTCGCCTCCGGGACCCCTCTCAGCATGTGCGGAAAACAGCCGCCTTGGTGATGACCCACCTGATCCTGAAGGACATGGTGAAGGTGAAGGGGCAGGTGAGCGAGATGGCCGTGCTACTCATCGACCCTGCCCCTCAGATCGCTGCCCTGGCCAAGAACTTCTTCAACGAGCTCTCCAACAAGGCGAACGCCATCTATAACCTCCTTCCAGATATCATCAGCCGCCTGTCAGCCCCCGAGGGAGGCGTGGAGGAAGAGCCTTTCCACACCATCATGAAGCAGTTGCTCTCCTACATCACGAAGGACAAGCAGACCGAGAGCCTGGTGGAGAAGCTGTGTCAGCGCTTCCGCACGGCCCAGACTGAGCGGCAGTACCGGGACCTGGCGTACTGCGTGTCTCAGCTGCCCCTCACAGAGCGGGGTCTCCGAAAGATGCTCGACAATTTCGACTGCTTTGGCGATAAATTGTCAGACGAGTCCATCTTCAGCGCCTTTTTGTCCATCTTGGGCAAGTTGCGGCGTGGGGCCAAGCCCGAGGGCAAGGCTGTAATAGATGAATTTGAGCAGAAGCTTCGGACCTGTCACACCAGAGGTTTGGACACAGTAGAGGAACTTGAGGTTGGCCAAGGCAGTAACCAGAGAGCCCCGTCAGCCAGAAAACAGCCAGCTGCCGCTCGGCACAGGCATGTGGCTTCTACAGCCTCAGACGACTTTGTCACACCGAAGCCCCGCCGTACCACCCGCCAGCATCCAAACACCCAGCAGCGAGCTTCAAGAAAGAAACTCAGGATTGTCTTCTCGAGTGATGAATCCAGCGATGAAGAACTGTCAGCAGAGATGACAGAAGATGAGACACCCAAGAAAACCACCCCCATCCGCCGGGCATCTGCTCACAGGCACAGGTCCTAGGGGCAGCCTTGCCTATCCCAACCCTGCTGTGCACGTGTCTTATAAAGAGTGACCCTGAATTCATTCCTTTTGTAAAATGCTTGTTTGCCTGTCTCCTTGGTTTTTTAATGCATAAATGGTCATTATAACATAAGGCTTTGCTCTTAAACCAGCCCAACTGAACCGAGTTGAGCTGCTTTCCTTGGAATGTATATATATATGTGTGTTTGTCAGTTTTCTTGTTTTCTAATGAATAAATATTTTTATATAGTTTTA EMBV3_36528 TCCCTATCATGAGGCAGAAACCTAGGGAAGGAGGGCGGAAGCTTACAGATCCCATCAAAG Gene GeneID:510256|SVOP:NM_001075441:114_cdna Constitutive 0 NULL GeneID:510256 17 GENE SVOP MGC139833 SV2 related protein homolog (rat) EMBV3_08627 GTGACCTGTTCAGTGGGATGAACTCTGTCAGCTCCATTCAGAACCAGATGCAGTCCAAGG Gene GeneID:789618|CDC42SE2:NM_001102537:78_cdna UTR3_Alt 3 NULL GeneID:789618 7 GENE CDC42SE2 MGC166112 CDC42 small effector 2 EMBV3_14313 CCAAGGAAACACAAGATTCTGAAGACAGTCGGGCAGCCACAGCATCCGGAAACACACGTT Gene GeneID:517881|LOC517881:XM_002691493:399_cdna Constitutive 0 NULL GeneID:517881 11 GENE LOC517881 NULL hypothetical LOC517881 EMBV3_38227 CTTCAGATTTATGCCATCTCTGCCACCCTCCTCCTTTCTGCCCACTTTGGAATAACTTGG Gene GeneID:510506|CPS1:XM_002685554:169_cdna UTR3_Alt 2 NULL GeneID:510506 2 GENE CPS1 NULL carbamoyl-phosphate synthetase 1, mitochondrial EMBV3_32548 TGGTGGCTACATCCTTGTAGGCATGGAGAGGCCCCAACTGGAGAAGAGCAAGCATCGCCA Variant GeneID:282709|RHBG:NM_174723:40_cdna 400^666 1 EMBV3_00299 GeneID:282709 3 GENE RHBG NULL Rh family, B glycoprotein (gene/pseudogene) EMBV3_05726 AGCTCTGGGTTGAAAGACCACGATGTAATTGTCAGCATAAACGGACTGCCTGTCACCACG Gene GeneID:514946|HTRA4:XM_002698718:153_cdna Constitutive 0 NULL GeneID:514946 27 GENE HTRA4 NULL HtrA serine peptidase 4 EMBV3_04815 GGCCATGCAGTGCCTAACTCCAGGCTTCACCAGATGTGCAGGGTTAGAGATGTTCTTGAT Gene GeneID:514753|MRPL50:NM_001046180:9_cdna Constitutive 0 NULL GeneID:514753 8 GENE MRPL50 MGC137630 mitochondrial ribosomal protein L50 EMBV3_33248 TTCAGTAGTTCAGCTAGGTGGATCTGCCCAACCTCTGGCCACTTGTGTAAGGAAACCCAT Gene GeneID:100125285|SNX21:NM_001103328:662_cdna Constitutive 0 NULL GeneID:100125285 13 GENE SNX21 MGC166092 sorting nexin family member 21 EMBV3_15592 AGGAAACCCCACCTCTTTTAGCTTATTGGCTTAACAGTGACCACCGGAGCCATCCACTCT Gene BVT0101_011058 - 0 NULL GK000015.2:75187020-75361015 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04848 AGGGGTCAGATCCTCCCCCAGAGAAACCTTGTAACGATTGGAGACACACCAAAAGTGGCA Gene BVT0102_203691 + 0 NULL GK000007.2:17003708-17008917 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215739 TCONS_00215733 TCONS_00215740 TCONS_00215734 TCONS_00215736 TCONS_00215741 TCONS_00215737 TCONS_00215738 TCONS_00215735 TCONS_00215732 1 XLOC_131057 Coding TCONS_00215732 XLOC_131057 Coding Coding RGL3 7:17006306-17017373 j TSS161060 3830 1 TCONS_00215732_3 294 0.393211488250653 13 0.65506958250497 0.000563052635037764 0.000290156996850043 0.000244095533797146 0.000210617609748028 0.000338268106390516 0.000307427563079252 0.000211917019673383 0.000544526024905719 0.000139254069680975 6.8964983044505e-07 1.54885670780363e-99 3.41597741631141e-17 1.19426489169883e-05 0.000616192530534196 0.000144631277925456 1.593248726575e-10 6.93824917824008e-07 3.81449451670459e-06 0.000821835605863183 0.000105663359186728 1.53409348831534e-05 1.05734689721047e-05 3.38083740187159e-05 8.73221451233208e-11 0.000354628829695015 0.00037719640192103 0.000754112738718503 3.60070679716187e-76 6.25386797334147e-29 4.78852800228094e-46 XM_005208792.1 RGL3 PREDICTED: Bos taurus ral guanine nucleotide dissociation stimulator-like 3 (RGL3), transcript variant X1, mRNA. 0.0 2636 98.80 0.38668407310705 NM_001035223.2 RGL3 Homo sapiens ral guanine nucleotide dissociation stimulator-like 3 (RGL3), transcript variant 2, mRNA. 0.0 1393 80.91 0.38668407310705 TCONS_00215732_3 sp|Q3MIN7|RGL3_HUMAN RGL3_HUMAN Ral guanine nucleotide dissociation stimulator-like 3; 1e-135 405 82.97 0.935374149659864 1 coding 0 0 0 0 0.0248801221348484 0.819818942682446 0.000488271408472185 0.992694121168503 GCTGGGGGCGGGCGGAAGGCCAAGGACGGGTCTCTGGCGCTGCCGGGAACTGCGGAACTTCTCCTCCCTGCGTGCCATCCTGTCCGCCCTGCAGTCTAACCCCATCTACAGGCTGAAGCGCAGCTGGGGCGCCGTGAGCCGGGAACCATTATCCACTTTCAGGAAACTTGCCCAAATTTTCTCCGATGAGAACAACCATCTGAGCAGCAGAGAGATTCTCTCCCAGGAGGCAACTCAAGGGCCCCAAGAAGGGGATGCCCCCACAGGAAGCCCGTCTTCGAAACTGCCCCCAGGCCCCATCCCCTACCTTGGCACCTTTCTCACGGACCTGGTAATGCTGGATACCGCCCTGCCGGATATGCTGAAGGGGGATCTCATCAACTTTGAGAAGAGGAGAAAGGAGTGGGAGATCCTGGCCCGCATCCAGCAGCTGCAGAGACGCTGTCAGAGCTACTGCCTGAGCCCCCACCCGCCCATCCTGGCCGCCCTGCGTGCCCAGCACAAGCTCAGCGAGGAGCAGAGCTACCGCATCTCCCGGGTCATTGAGCCACCAGCCTCCTCCTGCCCCAGCTCCCCATGCATCCGACGGCAAATCAGCCTGACCAAGCGCCTCAGTGCGAAGCTGTCCCGGGAGAGAGTTTCATCCCCTGGTGGAAGTCCTGGGGATCCCTCATCCTCCACCTCAAGTCTGTCCCCAGCATCCCCTCCATCCAGTCCTAGAACCAAGGACCCTCCTACAGGCAGTCCTCCAGCCTCTCCAGGGCCCCAGAGCCCCAGCACCAAGCTGCCCCTGAGCCCGGACCTGCCAGGCCCCTGGTCCCTGGCCCTACCCTTGAGTGGCCCTCGTATCTCCCTCCCTGGGCAGCAGGGCTCAGAGGCCCGCGTCATCCGGGTCAGCATCGACAATGACCATGGCAATCTGTATCGGAGCATCTTGCTCACTAGTCAGGACAAGGCCCCCACCGTGGTCCAGCGAGCCTTGGAAAAACACAATGTGGCCGAGCCCTGGGTCCAGGACTATCAGCTCTTCCAAGTCCTTCCTGGGGACAGAGAGCTCCTGATTCCTGACAACGCCAACGTGTTCTATGCCATGAGCCCAGCCGCCCCTGGAGACTTCGTGCTGCGGCGGAAGGAGGGGGCCCAGCATACAACCTCAGTCTCCCTATCCACTCCTCCAGGATATGGGCCTCATGGGCAGCAAGGGGTCTGGCTTCTATAACCAGGAGGTGGGGAGGGGGCTCCTCTATGAAAAGCTCCAATTCCCCAGTAGAGGTCATTGTGCTCCATACCCTGTAACCCCCCCAATTTTATTGGACCTCACCCCTCTGACCCTCTCGGCACCAGATCCCTGTTCCAAAGACACCAGCCCATGAGGCTGGCTGGTGGAGAGCTTCATCTTACAGAAAGGGGTGGGGTGTCAGGGGTCAGATCCTCCCCCAGAGAAACCTTGTAACGATTGGAGACACACCAAAAGTGGCAAAAATGGATGAAAATAGTGACCAAAGTTATAAAACAGGAGTCAGGCTTGTTTGTTCTGTGCCTGTGCCCCAAGTCTACTCTTCATTAGGATAAAAATTTAAATAAGAAAAGAAGGGTTTCCCTGGTGGCTCAGTAGTAAAGAACCCGCCTGCCAACACAGGAGACACGGGATCCATCCCTGGTCTGGGAAGATCCCACATGCTGTGGAGCAACTAAGCCCGTGTGCCACAACTATTGAGCCTGTGCTCTAGAGCCTGGGGACCACGACTCCTGGGCCCGTGTGCTGCAACTCTGAAGTCTTCAAGCTCTAGAGCCTGTGTTCCACAACAAGAGAAGCCGCCATGACGAGAAACCTGCGCGCCGCAGCTAAAGAGTAGCCCCCCGCCTGCTGCTTAAAGGAAATCCTGTGCAGCAATGAAGACCCAGCACATCCAAAAATAAATAAAAATTAGAAAAGAAAAACTAAGAGCCCTAAGAAAGGGGTTGAGTGAGGCACAGCTGACACCAGCATGGGGTGGGAGTGGGGTTCTGTCACAAACAGAGGGTTCAGGACTCTGTCCCTCAACATTGTTGGGGTAATATAATTCTTTCCTGCTGGGTATATGGAAGAGGGAAGAAATGAAATTCCATCAGAACTTGAGGCAAATAACATCATCATGTGAAAAACAATCATAACAACATCAGCAACAACAATACCCAGTTATGAACTCCCACTCTGCTAGACATCAACTATGGGCTTTATATCTAACTGTATTAATAAGGGTTCTTGCTTTTTCAAGTGTTCAAAAACCCAATTCAAACAGGAATGGGCAAAAAAACAGAAATGAATGCCCCTGTAATTGAAAAGTTCCATGGGGCCAGCTTCAGGCACTGTTGGATCCAGGGACTCAAAAGATGTCACCAGGACTTTGTAACAGAGTCTCTTGCCTCTGATTTGCTCTGAGAATGAGACTGTCCATTGACTCCCTAAATCCAATCACCTTCTCCTATGGTTACAGAAACACTGATTTTTCAGCTGGTTCAGCTGGCTACCCAGAGTAACAACTGCATTTCCAGTCTCCCTTGCAGTGAAATGTGGTCATATGACTAAGTCTCAGCCAATGAGTTGTAAAAGGAAAGGATGTGGGTACATTCCAGGCTCTGCCCTTAAAGAGAAGGGGTGTGTCCTCTCCTGCCTTTTTTTGCCTTGGGTTGATTAGAATGAAGATACGGAGTGGATCAGCTTGGACTGGGTGGTTCATACCATCTGAACAACTGAGCAGCAAACTGGAAGGATCATGGCCCTCTGAGACCAGGGAGCAAACACACTGTGTTGCTGCTACTTGAACTGTTACAAAAGAAAATAAATATCTATCTCAAGACTTCCCTGGTGGTCCAGCAGCTAAGACTGAGCTCCCAATGTTGGGGGCCTGAGTTCCATCCCTGGTCAGGGAACTAGATCCTACATGCTGAACACCACAACTAAAGATCCTGTGAGCTGTGATTGAGACCTAGCACAGCCAAATAAATACATATTCTTCTTAAATGCCCAGCTTATTTAAGCCATCAGTATTATTTGGGTCTCTGTTACAGCAGCCAAAAAAAAATTTTTTTTAATGAATATTGCCCCACTCCAAGGCTGGATCACCCTCATGGGGGCGGTGCCATTCTTACATACCACCAGTTCCACCTGCCATGCAAGGAAAATCCCTGGGACTTCCCTGGCAGTCCATTGGTTAAGAATCCCCCTTGCAATGATGCAGGGGACACGGGTTTGATCTCTGGTGAGGGAACTAAGATCCCATGTGTCTCAGAGCAACTAAGCCTGAATGCCACAACTAGAGAATCTGTGTACTGCAACAAAAGATCCCACATGCTGCAACTAAGACCTGATGTAGCCAAATTAATTCATTTAAAAAAGCAATTGGATGTAACAGTATTCTTCTTAAATTGTTATTGTTGTTCAGTCACTAAGTCATGTCAGACTGTTTGCAAACCCCATGGACTGCAGCGCAATCTTCCCTGTCCTTCTTAAATTAGCTTAAGCAGATAATTGCTATCCTTACTGAGCGCTTACTGTGTGCCAGGCATGTTCTCGTAACTTGATGTAATCTATTCATAATCCTCACATAAGCCTTATGAGGGGGCATTATTATCATGCCCATTTTATACATGAAAAACCGAGACTAGGGAGGGTTAAGTAGCTTATCTAAGGTTGCAGGGCAAGTGACATGTGGAATGCATCAGAACATATGCTCTTACCCAGGGAGCTAGCTTGCCTCTCATAAGAACAGTACAGTTTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACATA EMBV3_22055 TGATACTTGACCCATCACCATAGAATCCACAAAAAAGGACCTAACCAATAATGTCATTTC Gene GeneID:780867|C5orf28:NM_001079795:2_cdna Constitutive 2 NULL GeneID:780867 20 GENE C5orf28 MGC139853 transmembrane protein C5orf28 homolog EMBV3_40539 TCCTTCACAGAAAACTGCGTGGTGGGAATCCAGGCCAACACAGAAAGGATTAGCAAGCTG Gene GeneID:520260|FH:NM_001075803:53_cdna Constitutive 0 NULL GeneID:520260 16 GENE FH MGC140701 fumarate hydratase EMBV3_01983 AGCTGAGCGCTGCCGCCGAGGAGGGCCTGGTGCCAAGACCCGGCAGGGTGCTCTCGAGAG Variant GeneID:767939|IFRD2:NM_001077012:328_cdna 321^405 1 EMBV3_20145 GeneID:767939 22 GENE IFRD2 MGC129055 interferon-related developmental regulator 2 EMBV3_00609 CTCCAGAACTGGGCTTATACTTGATATTCTTTCAAAGCACAGTAGGGCTTTTTTACCCCA Gene BVT0102_146115 - 1 EMBV3_42395 GK000002.2:39361502-39765200 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105108 TCONS_00105104 TCONS_00105107 TCONS_00105102 TCONS_00105106 TCONS_00105105 TCONS_00105103 TCONS_00105101 TCONS_00105109 1 XLOC_062505 Coding TCONS_00105101 XLOC_062505 Coding Coding GPD2 2:39762688-39780629 j TSS77653 4710 1 TCONS_00105101_2 285 9 0.737959866220736 0.000335090569312528 4.01334690652618e-07 2.12573276118944e-08 0.000469867627190034 1.05738277137099e-09 4.1217842926288e-05 1.42990913297059e-05 0.000568322574573381 4.79005490258021e-05 1.44251912344736e-05 2.35164257119933e-06 1.57255752784196e-05 3.27700401146024e-05 3.23600333347951e-05 6.23680319480717e-05 0.00111449546948522 0.00167961102456795 2.20447858370903e-05 4.70203426132799e-09 0.000867481076519473 5.42216279107512e-05 7.79812589247892e-09 1.82778934846675e-10 0.00179875777286015 2.2362677422524e-08 2.24584603204762e-05 1.30216207185099e-09 1.83409770290495e-05 6.91674570619748e-06 0.000127317106682453 XM_005202413.1 GPD2 PREDICTED: Bos taurus glycerol-3-phosphate dehydrogenase 2 (mitochondrial) (GPD2), transcript variant X1, mRNA. 0.0 8010 99.82 0.947983014861996 XM_005246469.1 GPD2 PREDICTED: Homo sapiens glycerol-3-phosphate dehydrogenase 2 (mitochondrial) (GPD2), transcript variant X1, mRNA. 0.0 4015 79.10 0.964968152866242 TCONS_00105101_2 sp|A6QLU1|GPDM_BOVIN GPDM_BOVIN Glycerol-3-phosphate dehydrogenase, mitochondrial; 0.0 588 100.00 0.996491228070175 4 coding 0 0 0 0 0.0291221650863961 0.84535301224798 -0.033137220680762 0.638199267942174 TTATACCCACAGCCCTGACTGGTCACTACTTAATTTAGATGGTAGAGAGTGAGAAGAGGGGATGTCCTGGCTGCGTGGAGCGGTATTCGCCCCCTTGTGACAGATCCCAAGTCTGCAGACACGAAGTCCATCTCCCGAAACCATGTCGTGGACATCAGCGAGAGTGGCCTTATCACCATAGCAGGTGGAAAGTGGACAACCTATCGATCTATGGCAGAAGATACCATAAATGCCGCAGTCAAGGCACACAATTTGAAAGCAGGACCAAGTAGAACAGTTGGGCTTTTCCTTCAGGGGGGCAAAGACTGGAGCCCCACACTCTACATCAGGCTCGTCCAGGACTATGGACTTGAAAGTGAGGTGGCCCAGCATCTTGCCGCCACCTATGGTGATAAGGCTTTTGAGGTGGCCAAGATGGCAAGTGTGACGGGAAAGCGGTGGCCCATTGTTGGGGTGCGTCTTGTGTCGGAATTTCCATACATTGAAGCAGAGGTGAAATACGGGATTAAGGAGTATGCTTGTACCGCTGTGGATATGATTTCACGTCGTACTCGCCTGGCCTTCCTAAATGTGCAGGCGGCAGAGGAGGCCCTACCTAGGATTGTTGAATTGATGGGCCGAGAATTGAATTGGGATGATTCTAAAAAAGAGGAAGAACTTGAAACAGCCAGGAAGTTTCTATATTATGAAATGGGCTATAAATCTCGATCAGAACAGTTAACAGATCGCTCTGAAATTAGCCTACTGCCTTCAGACATTGACAGGTACAAGAAGAGATTTCATAAATTCGATGCAGACCAGAAAGGCTTTATTACCATTGTTGATGTTCAACGTGTATTAGAGAGTATCGGCGTCCAAATGGATGAAAATACGCTACATGAAATTCTGAATGAAGTAGATTTGAATAAAAATGGACAGGTTGAACTCAATGAATTTTTGCAGCTGATGAGTGCTATTCAAAAAGGAAGGGTGTCTGGAAGCCGGCTCGCTATACTCATGAAAACTGCCGAAGAAAATCTTGATAGAAGAGTTCCCATCCCTGTGGACCGAAGTTGTGGAGGATTGTGAGTCTGAGCAGTGAATCCACAGCCGACAAACATAGGAACAACAAATCATCATGTAACAAACCAGAGAGGACCGACACCACTCCAAAACAGTAGACATGGATAGCTGCCTTTTTGTAACACTGGGAAACATTCCAAAGCTTTAGGATGTCGATGTAGACCCTTTATTGGTATTTGCCATTCAGTCTAGCTTCTTAAAAGTGTATTTTATCATCTTTTCTCATTTTCAGTGCACACTGATTTAATGTTTTGCTTTCATTTTGTGATCTGTTAGACTGGACATACTCCCTTTTTGTTTATTCATTTATTCTAAGTCAATTTGAGAGAATATTTTGGCAAAAATTGAAACGAGAAGCTGGAAGCATTTTGTGAGATGCACAAACCTCTGGACATTAAGCTTGTTGATAGTATTTGTTCTTAAAAGAAATGGAGTGGGACCTATTAAAACAATAGCATTTCTGGAGACCTCTCAGCCCCCTTCTTCCTCCAGCTTGTCTGCTTTCTTTATCCAGACTTTATGTCTAAGCATGACTGGTAAAACTGGAGAGGGAAAAAAAGTTTAGATCTGGTTATAAGAGCAAGTCTCAAAGAGAATCTCTGAAAGCTTCCAGAATCACAGGTACGAGATATAAGGATAGCATTGACATTTGCTGGGAGTTACCGTGATAGTTTCATCTCAGCAGTTCAATTTCCCCCCCAGTCACTGCTAGTTTTTCTTTTGACTATTACAGTTGCCAGGAAGATCCCTGCTTTTCTTATTTTAAAACCAGGATTTAAGTGGCAAGTTGGATACAGTGGGATGGGACTAGATTTCTCAAATTTTTACAGTTGTAATAAATTGAAGGATTAAAAAACCTGTGTTCATATAGCCACATATATAGCACAGTTTTCAATTCTCAAATCCTAGGAGTTGGAGCATGTGATACCATCGAACATGGCCTATTTTGCTTAGGTTACTGTATCAGTTGGAGGGAATATTTATAAACAGATAGTAAAAGAGAATAGAAATAGTCTATTAGTTAACTTTAATTATAATTATTTGTAAAAAGGCACACAATTACAATGTTCATGGTCATTTTAATTGCTTAAAGCCTTTCTCCTTCTGTACTAAATGGAAAAGTTCTCAACCAAAAAGAAAAAGAAAACCATACTCGACTCACACTCACACATGTCCACCATCACACACATACACAGTCACAGAAAGACAAAACAAAAAGATCAATCTGCTCAGAATTTAGTAAATACATAATATACTGAATTTAAAGGGCCCATTTGGCATGCTTTTGTAATACTTTGGTGGCATTTTAGCCAGTTGTCTAAATTTGTCTTCTTCGTGCTTCCTCTTGTGAAGTTAACTACCTGCTTCTTTTGATTTTTAAGAGCACGTTGTGTATAAAATAGGAAACGTGACCCTTTTTTAATGTCAGGTTTTCATTGTGCAGACTTAATTTTTCAAACTGGTACATAAAACACTTTTGTGCTGTTATTTCTATATATGTCAACATTGTAGAATATCTTTATGTCTCATTCGAGTTGGGCATGAGCCTGTCTGTCATAATATACACACTGGAGGTTAGCTCACCTAAGCCCCCACCCTCACCTCGGAAACAGATAAGGTAGCACGGTAACTCATTTTGCTTTTAAAATGAAGTTTAGACTTGCCATTTCCTTAAGGAAAACCTAAAACAGAGCAAGTGAGGCTCCCAAGTATCACTGTGAACTTTTTCTTTTTAAGGTGTGATTTTTTTTTTTTTTTTGCACTGGTTTCATTTCCTTTTTTTTTTTTTTTTAAATAATAGACGCATGTGGTTTTGTAGTTTTGTTTTTCTATCAAGATAGTAATTTCACTGTTTAGAGCCCAGCGACCCTTAATAGAAGAGCTGTCCTTTAAAACATCAGAGATGATGTACCACAGTATTATACATTTGTGCTCTCTCTCTTTCTCTTCATTTCTAGTTAAATCAAGATAACGATGGCTTGTATCCCCCCTGAATCCATTACAGTAGGGATCGGGCTTATGACCTGAGTGGCCTGGGCAGAACTGTATTTGAAAAGAGGCCTTGTTTGTGCACGCTTTGCTTTGAGTGAAGTTCCTTTAAGGACAAAGAAAAGCACACTTTTCTTCCTTTGAGCGTATCTGCCTTTGCTTAAAACCTGCTAATTCTAAAACATACGCTCCTTCACCAATCCCAGAGTCTCGTCTTGGAAATGAGCTGGTTCCAAGTCTTTACTGTGAATAAAGCACCCCCGCATTTTGTATAAAGTTCTTAATTAAACCTGTGCAGCTTCTTTACCTGATTTCAGAAAAGGAGAGAAGAAATGGGGGGTGGGGTGTAAGTGTGATTCAAAATCTATTCCAAGCGCCAAAAGAATTTTTTTTCTTTTTTGTATAAATATGGTATTAGCTGATTCTGTTGGGCTGGGTGTGGGGTGTGTGGAAGACTGTCTTTTGTCATCAAGTGATTTGTTTAAAGAGCCTTTAATGGGATTCAGGTGAAGGTACCCCCATCTGTGGTGGAGAGCTGAATGCTCCCTTCAGTAGCCCTTCGCACAGTTATAACAAGAGTGGAAATGCCAGATTATTTGTTAAGCCAAGGTTGTCTGCCTCATTGCCGTCATGCTGTTTGCAATATTCTTGCTTTCAATCAGTTTAACTTTAGGATTTCCACTACTAAATGCATGCTCCCTATTCTGCTTTAGTTTCTAGCTTTGTATTGTCTTTTTTCAAAGTATGTAGTTTGCTCTTTTATACAACAACAAAATTTCATTCTTTTACTGAACTGTAAGAATGATCATTGATCTTATTTCCCTTTTTTATGTATTTGTAAAGATTTTTGGCATATGAATGTAATAACATTGAAGTCAGTGACACTAATACCTTGCACTGTTTTGCATTATGTCTACCCTTTATATGGGGTAAAAAAGCCCTACTGTGCTTTGAAAGAATATCAAGTATAAGCCCAGTTCTGGAGTCGATATACACACTGCATGTTTTCATATATGGCATTTTTTATGTATTGTGTTGGGTTATTGTTCTAGATTGGACTGTTAAATGCTATGTTTGAGGCTGGGTTGTCATTTTTATAACTGTCTTGGTGTTTTATCGCCATTATTTATTACTTTTGATATACAGAATGAGCTGCATGCATTTATAGAGCAATAAGAGGATGTATTTAATGTGCCTTGTTTTTAACTGAATAAGAACTGAAAGCATGAATCAATAAAGCTGATTAAAATGGTCCATTTACTGGCATGTTGATGTACCTTGAAGTCAGAGAAATAACTTTGATGACTTGTAGTTTAAAAAAAAGTTTGGAAATATTTTCACAAACTGTATTTTTAACTGCATTCACACATTAATACTTTTTGCTTGCAATTTTGTAATTTTATCTCAAAAGTAAATCCCTGCATAGACTGATGTAATTTTATGAGACTGCCAGATTTATTTGTATTAATTTGTTGCTGGAACCTTTAGGGCATGACTTCTGTATTTGTGCAATCCTATTCTAAAATTACATGCATCCTGTTAGGTCTGTTGAATTCTTTTTTTCCTTTCTTTTTTTTTCCTTTTGTCAACCAGAGCCTTTTAGCCTGAGCATTCCCAGGCACACTGATGAATTTTATCATAACCAAAATCAATAGAAAT EMBV3_03431 TACTCTGAGTTTTTCTACTCTTATTGGACAGGGCTATCCCGCAACAGCAGCGGCAAGGCC Gene GeneID:536944|CLEC1A:NM_001076081:46_cdna UTR3_Alt 2 NULL GeneID:536944 5 GENE CLEC1A NULL C-type lectin domain family 1, member A EMBV3_09922 GACAGTCAAAAGGACGTGCAAAGTTCAACCCCGCCCTAACTTTCCTTACAATCAGAGCCC Gene GeneID:535450|PUM1:XM_002685620:287_cdna UTR3_Alt 3 NULL GeneID:535450 2 GENE PUM1 NULL pumilio homolog 1 (Drosophila) EMBV3_22776 ATGAGTCACATAATGAGCGGTATGAGGAGGGCAGGGTTGGTAACTCAATGATCCAATCAG Gene GeneID:281285|LRAT:NM_177503:17_cdna UTR3_Alt 2 NULL GeneID:281285 17 GENE LRAT MGC134242 lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) EMBV3_25838 TCAGTGGCTCTGTCAACTCTCTCGTGCAGACCACCATCACCTTTCAGTTGCCTATGTGCA Gene GeneID:100299556|LOC100299556:XM_002687018:70_cdna Constitutive 0 NULL GeneID:100299556 4 GENE LOC100299556 NULL similar to olfactory receptor Olr1654 EMBV3_38246 GGCTCTGATTTCACTCTTCAGTGTTCCTGTTATTTATGAACGGCATCAGGCGCAAATAGA Gene GeneID:359718|RTN4:NM_001075138:45_cdna UTR3_Alt 2 NULL GeneID:359718 11 GENE RTN4 MGC139261 reticulon 4 EMBV3_18646 TCGCTGTAATTCTAGGATCCCTGTTCTTAATAGCGAGTGTGACCTGGCTCCTCTGGTCAG Gene GeneID:781742|MARCH11:XM_002696445:88_cdna Constitutive 1 NULL GeneID:781742 20 GENE MARCH11 NULL membrane-associated ring finger (C3HC4) 11 EMBV3_13829 TGGCCCCCAGAACATATACAACCTTTACGAGCAAGTCAGCTACAACTGTTTCATCGCGGC Gene GeneID:512886|RNASEK:NM_001034429:93_cdna Constitutive 0 NULL GeneID:512886 19 GENE RNASEK MGC128335 ribonuclease, RNase K EMBV3_23555 TCACTCGGATGACAGCACAAGGGCCACTAGCCAGAGACATTAATCAAATATGCACCACCC Gene GeneID:616546|LOC616546:XM_002693983:234_cdna Constitutive 0 NULL GeneID:616546 16 GENE LOC616546 NULL similar to Kinesin-Like Protein family member (klp-6) EMBV3_42919 AATGGGGAAGGTTATGCATGTGTGGGGACAGGGAATATGTGGGAAATCTCTGTGCCTTCC Gene BVV0101_084187 + 0 NULL GK000010.2:53481050-53712530 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19239 GAAGCTAAAGGAGCTGAAGATGCACCAGATGCTGACACAGCCATTATCAATGCTGAGGGC Gene GeneID:517759|CADM2:XM_002684658:13_cdna Constitutive 0 NULL GeneID:517759 1 GENE CADM2 NULL cell adhesion molecule 2 EMBV3_30624 CACACATATGGGGAAGGCAGATGGAGAGATTGACTTCACGATTGGGCTCAGGTGATTGTG Gene GeneID:514257|LOC514257:NM_001075657:8_cdna Constitutive 0 NULL GeneID:514257 4 GENE LOC514257 NULL hypothetical LOC514257 EMBV3_42282 CAGAGACAAAGAGGAGATCTTCGGCAGTGATGCTGATTCGGAGGATGACGCTGACTCTGA Gene GeneID:100336931|LOC100336931:XM_002695053:394_cdna Constitutive 0 NULL GeneID:100336931 18 GENE LOC100336931 NULL hypothetical protein LOC100336931 EMBV3_29615 CTCTGCGGTACACCAGCATTATGAACAGCCACACCTGTCTCTGGGTGGTAATTGTGTCCT Gene GeneID:519161|LOC519161:XM_002687006:22_cdna Constitutive 0 NULL GeneID:519161 4 GENE LOC519161 NULL similar to olfactory receptor 461 EMBV3_21864 GTGATCCAGAACTAGACCCAGGTCCTCTTGAAGTTCAGTCCAGAAGTATAGTTACTGTCC Gene BVV0102_165587 - 0 NULL GK000022.2:20200003-21268880 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32610 ACAGAACCTGACCCTCCAGTGTCGCTCTGACATCGGCTACACCAGATTCGCTCTGTCCAA Gene GeneID:100335905|LOC100335905:XM_002707884:111_cdna Constitutive 0 NULL GeneID:100335905 18 GENE LOC100335905 NULL immunoglobulin-like transcript 8-like EMBV3_38689 AAGAAGCCAGCATTGCTTTCATCCTACTGATGCTAAAACTTGCTCCTTGGCAATGCAGAA Gene GeneID:514113|UOX:NM_001075648:41_cdna UTR3_Alt 2 NULL GeneID:514113 3 GENE UOX MGC128791 urate oxidase EMBV3_08185 TTGCTATGGTAGGAGTGTGCCTCGAAAACGCGACGCTGAGTGAGAGAAGCCAGACGCAGA Gene BVT0102_281845 + 0 NULL GK000025.2:792412-857123 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144091 TCONS_00144088 TCONS_00144090 TCONS_00144089 1 XLOC_088455 NonCoding TCONS_00144091 XLOC_088455 NonCoding NonCoding - 25:803027-807812 - TSS108266 671 2 TCONS_00144091_2 92 0.0998509687034277 4 0.860576923076923 7.62469417195887e-05 0.000418699649069162 3.48982426844265e-05 2.92129940957513e-10 4.54840083888469e-92 0 0 9.6962172602207e-05 0.000193640517338349 2.45180577863243e-05 0 0 0 0 0 0 0 0 6.64046403687438e-05 0.000369542459999763 8.83801239372315e-11 0 0 0 1.37455276488063e-09 0 5.25124687519653e-05 0 0 0 0 noncoding GTGCGCCGGCCAGGTTTGTGGGCCAGGACCGCGCAGGGAGGCTCGGCCGTGCGCACTGCCGCAGCCCCGGGATAGCGGGTGACACCAGCCAGGCCAAGGGGGAGACGTGTGTGGCCCCCTGCACACAGAGCCTCACTCGGCCCCGAACAGGGAGTGTGGGCGCTTGCTATGGTAGGAGTGTGCCTCGAAAACACGACGCTGAGTGAGAGAAGCCAGACGCAGAAGGCCACATGACCTTGGCATCAGGACTCCAGGAGAGGCCGCCCCGGAATGTTCCGCCCTGGCTCGATGCCTGCCGGGCCGCGTGGCGGGCACAACGGTGCGGTTCACACCCCTGTGCCCTGTGGGTCCAGGTCCCACAGAAGCCCCTGGGGACTGGTGGCCATGGAGGGACGTCACCCAGGCCTGAATTGTGCTTTGGAGCTGAAAAGTCGCTGTCTCACAAGACCCAAGGCGGTAGGGTGCAGCAGCAGCCTGCCTGGCTAGAGAGGGAAGTCGGCCATGAATGAATGAACGGGTTTGCTGCAGAGTCTGTGAGGCTTCAGGACATTTTCTGGGTGAGGAGCCGGCCGGGGAGCGCGCCCACCTCTGCGGCAGCTCCGATTGGCGCGTTTTCTCCAGCCTCCTGAGCAGCCTTGCCAAGTGTCATAAAAATACATCAGTGCTCCGGC TCONS_00144087 s 3' 10617 TCONS_00144087 s 3' 10617 EMBV3_30644 CTTGAATCCGAAGATGGAGAAGTGGAACAGCAGCGAACATACAGTAGTGGACACAACCGC Gene GeneID:538774|SUZ12:XM_002695636:57_cdna UTR3_Alt 3 NULL GeneID:538774 19 GENE SUZ12 NULL suppressor of zeste 12 homolog (Drosophila) EMBV3_06965 CTGGCTCCCAAGATTCCGATCCCTGGTTTACACACCCCGTACACTCCTCTCACCTTGAAT Gene BVV0102_188684 + 1 EMBV3_24208 GK000010.2:43178384-43211975 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21976 TTCATAAAACCATGATCAAAGAGGAAGCCTTGTGTACCAGGCACATGCTCAGGGCTGGGG Gene BVT0102_184554 + 0 NULL GK000008.2:16371628-16694706 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229895 1 XLOC_139389 NonCoding TCONS_00229895 XLOC_139389 NonCoding NonCoding - 8:16575591-16575891 - TSS171399 300 1 0 0 0 0 0 0 0 0.000369341835888505 0 0 0 0 0 0 0 0 0 0 0 0.000406352287116766 0 0 0 0 0 0 0.000117424502077138 0 0 0 0 0 noncoding 0 0 0 0 0.0172839849214954 0.892741769786818 -0.00312443497689832 0.96063709432654 CTAAACGAGGAGTTGGGTTTTAAATGCAGTATTTGGAGGATTCCGTCCCCTAACTTTAAGGTCACTAGTAATACATATCCAGTCTTTCTAGATAGACTGTAAAAGTCCTCTCTGGCAGGGATGGGCTTCAGTGTGTCCCCAGCCCTGAGCATGTGCCTGGTACACAAGGCTTCCTCTTTGATCATGGTTTTATGAATATGCAGACACGCCATTCCTGATCAGACACTGCTTCACAAACTTGAAAGCTTGAGAAGATTCCAAAGCATCAGTCCCCAGTGAGTTTCCTAATTTATTTTCCCC TCONS_00224512 . 5' 111596 TCONS_00224512 . 5' 111596 EMBV3_40906 GTTTGCAGTCAAACCAACAGTGGGAGAATCTACTCTCGATCATCGTCCTGCCAAAGCCTC Gene GeneID:497023|SPATA4:NM_001011677:5_cdna Constitutive 1 NULL GeneID:497023 27 GENE SPATA4 MGC127940 spermatogenesis associated 4 EMBV3_31645 TCAGTCAGGTCAAGTTTGTCTGGGGTGGCATGGAACAGTCAAATAGTTGAGTGTAGAAAG Gene GeneID:534586|TRA2A:NM_001046380:29_cdna Constitutive 0 NULL GeneID:534586 4 GENE TRA2A MGC128720 transformer 2 alpha homolog (Drosophila) EMBV3_20846 AGCGCGCCAACTCGCTGCTCCGTGGAGCTGACGTTCAGAGAATATCCATTTCTTATTGAA Gene BVV0101_000820 + 1 EMBV3_17220 GK000005.2:49682913-49718466 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194946 TCONS_00194952 TCONS_00194949 TCONS_00194950 TCONS_00194951 1 XLOC_117886 Coding TCONS_00194950 XLOC_117886 NonCoding Coding C5H12orf56 5:49669814-49718353 x TSS145367 277 3 0.99435493839878 0.00120683297308655 0.000161291575887122 1.69613501981227e-225 1.16157330111551e-08 0.000317913824948116 0.000207453285704444 8.44207159345391e-156 0 0 0 0 0 0 0 0 0.000234400490882409 0 3.71885628804286e-163 8.86714909147434e-133 0.000437544661687947 0.000144329722693939 4.02416736567357e-182 1.61429542210776e-05 0.000138444829408016 0.00381258739235573 0.000832277963289358 0.00102519021296708 0 0 1.25579305561777e-31 XR_231115.1 LOC101906522 PREDICTED: Bos taurus uncharacterized LOC101906522 (LOC101906522), 3e-58 228 100.00 0.451263537906137 0 noncoding 0 0 0 0 0.0470769931257535 0.649359261662766 0.0356012906333548 0.450245311420688 GTGAGCGCGCTGCTCCCTTGACCGAGCCTGGGCCTCAGAGAGGACGAGGATAAGAGTTCAGGCGAGAGACGGGTAACGGCCCCTCAGCTCCTGAGCCGCTTCGGCGCTTCTGTTCCCGCAGCTCTGACTATTCGGACCCTCAGGGCAGAGCGCGCCAACTCGCTGCTCCGTGGAGCTGACGTTCAGAGAATATCCATTTCTTATTGAAAACATCTGTTGAGCATCTGTGATCAGCCAGATCCTGAGCTAGGGTGTGGTGAAGGCAAGAAGTTCAGCC TCONS_00191802 TCONS_00191803 r 3' 681 TCONS_00194946 TCONS_00194946 s 5' 0 EMBV3_26057 TTCCGGTACAAGCTCCTGATGGCCGGCGGGGACGCCAGCAAGGAGAGCAGCAAGGCCTGC Variant GeneID:504458|MLLT1:XM_002688914:213_cdna 472^597 1 EMBV3_15480 GeneID:504458 7 GENE MLLT1 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 EMBV3_12012 CAACTTGTGTTCTGCTCCTGGCTAGGGGGATTCCTGGCTATCTTTCCCCCAATCATCTTA Gene GeneID:615284|LOC615284:XM_002687589:668_cdna Constitutive 0 NULL GeneID:615284 5 GENE LOC615284 NULL similar to olfactory receptor, family 6, subfamily C, member 4 EMBV3_17457 GTGCCCAAGGGGAGATAAAAGAATGAAAACCTTCCCCACCATTTCCCTGTGGACCTGTGG Gene BVT0102_086140 - 1 EMBV3_03376 GK000011.2:63291019-63337654 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31218 GGCTTCCCGTGTCGTCCATCATACCTGCTCCACACCGCATGTACAGTTGCAAGCTACTCT Gene BVT0102_339440 + 0 NULL GK000030.2:134309912-134582940 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045117 TCONS_00042620 TCONS_00042622 TCONS_00045116 TCONS_00042623 TCONS_00042624 2 XLOC_026352 XLOC_025709 Coding TCONS_00045117 XLOC_026352 NonCoding NonCoding DSTN 13:38284495-38285537 x TSS32999 745 1 TCONS_00045117_1 50 2 0.28626320845341 0.0600681767330185 0.0357746789106816 0.040033107280459 0.0388945996215511 0.0208644208215065 0.0166282027839345 0.0135871955135447 0.0432880511934289 0.0546874962930894 0.000875288021939744 0.000141791364606209 0.000442019252687074 0.00618566674764833 0.0012596637932843 0.00976351659739232 0.0251984182471239 1.68436660402859e-07 0.0222763079220383 0.018937017144793 0.0113729308867856 0.00277699322196627 0.00145721417208845 0.0121392978790355 0.0129370985171324 0.0063512871470193 0.0169688535467899 0.00993299375006236 0.000874513382499694 0.000760077853726074 0.00148185974293002 XM_005260653.1 DSTN PREDICTED: Homo sapiens destrin (actin depolymerizing factor) (DSTN), transcript variant X1, mRNA. 2e-47 194 71.72 0.557046979865772 0 noncoding 1 1 1 1 0.0512603965201174 0.812684492128533 -0.390675034057664 0.000286431835099427 ATTGTCTGAAATAGCCAAGCCTCCCCACCTAACCACACATGTGGAAGGCAAAATCCTTTATTCCCAAGTCACGCGTGAATAATTACACAGGAGAGAAGTTAAAAATGCTTCCTTTATTACATAAAGCCAGTACTGCTACTTCTAAATTCCACCGTTTGTGGGTCTCTAGGTGCTCAGTGTTATGCCTGTGATGTGAAGGACAGTCACTTCCAGGGTGCTCAGCGCGGCTTCCCGTGTCGTCCATCATACCTGCTCCACACCGCATGTACAGTTGCAAGCTACTCTAGGAGAGGAAGTTCTCCCGGGCCCTAGAGTAAAAGTAACATTCTTCCATACTTTATCATACCAGAAGCAACAAAGTTCTGAAGGAGACATAATTAGTTAAAGACAGCACAGAGTCACAGTCTGTCAATACACCACCCTCACCGTTTTTCATTAACAAAGTGGGTTACGCTGGAGCCCAGGTCTGCTTTACAATTCGCTGTTATAAGATGGTGCACACTCTCCTGAATCCAGGGTGCAAGGCCACTCTCAGAACAGCCTCCCGACCAGCCCTGTGAGTGAGTGGCCCCAGGTTCGCGAGTGGCTTCCTCTGCCAACTATGGGCTGCAACAGCGCTCTGCAAGGTCAGCACTGGTTCGAAGCCTACACCTTTCAAGGCAGTCTCTACCATGTATTCAGTAGAATCACCAAGTTAGGACTTTAGTGCTGTTACATGTTGTGAGGAGAACTACTTTCCATGAAT TCONS_00042624 TCONS_00042624 r 5' 0 TCONS_00042624 TCONS_00042624 r 5' 0 EMBV3_11025 CCCATGAGCAAAGTCAAAACAGTTCCAGCAAATATAAAGTACAGTAGACTGACCCGGCAG Gene BVV0101_056673 - 1 EMBV3_18143 GK000009.2:66999574-67019075 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40163 CAGCGAGCACAGCTACAGCGAGTCAGGTGCCAGCGGCTCATCTTTCGAGGAGCTTGACCT Gene GeneID:535455|TEX264:NM_001038169:244_cdna Constitutive 2 NULL GeneID:535455 22 GENE TEX264 MGC134080 testis expressed 264 EMBV3_19891 CATTCTGCTGTATATTACATCCCCCAGATTTAGTCCATCCTTTATCCCCATGTCTCTGCC Gene BVT0101_016816 - 1 EMBV3_42751 GK000018.2:63558258-63565628 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087614 1 XLOC_052548 NonCoding TCONS_00087614 XLOC_052548 NonCoding NonCoding BOSTAUV1R428 18:63562758-63573769 x TSS65039 1590 2 TCONS_00087614_2 75 0.19748427672956 2 0.855767484105359 0.00022248079740462 3.03434896048195e-05 0.000349206386046241 7.83410451664929e-05 0.000239095581085478 0.000388882298586164 0.000176051472818118 0.00109738404890948 0.000868410860065779 9.30289997955305e-05 7.28721957525498e-06 0 0.000126505178654996 0.00010651234104067 0 1.9515733034307e-05 0.00107669144085627 0 0.00016687067201175 0.000247781428494856 0.000118374186842402 1.1564097326559e-11 0 6.74272199589895e-11 0.000395004609788185 9.30533603811747e-05 0.000103177112904243 3.93248585129665e-12 3.21685934417769e-06 6.42818618863332e-05 XM_005193489.1 MCCC2 PREDICTED: Bos taurus methylcrotonoyl-CoA carboxylase 2 (beta) (MCCC2), transcript variant X4, mRNA. 2e-31 141 72.66 0.156603773584906 NM_013269.5 CLEC2D Homo sapiens C-type lectin domain family 2, member D (CLEC2D), 1e-09 69.8 83.33 0.0408805031446541 0 noncoding 0 0 0 0 -0.0595570888876969 0.605006533147444 -0.0595570888876969 0.605006533147444 CTGAGCACCTGCAGCAACGTGAGGAGAAACAGTGACTTTGGGCACCTAAGGCGTTTCTAACCTCACGGCCGACCTCGCTCCTTTTCCCACCACAGCGGCGGTATTACTTCCGCTCAAAGCAGGAAGCGCGTCCTGGCCTCCCCTCCCAGCTCTTAGTCGCCCCTCTTCCCGCCACTTCAACGGTCTGGTCCTTCAGGCTCAGCCTCCTGGCTCCACCTGCTGAGAATCACCTCAGGAACCCCTTCAGTCACCATGACTGACTCGCTCTCTTCAAGATGAAATTCTTACCTTTTTGTTCCTTTCCTCCTCTCCCCTATCTCTTCCTGATAAATCGTGAGCTCTCAGAAACAAGAAATACTCTCCCGGCAGATGCAGCTGTCGCTGACGAGCACCGTGGCTCCCGGCCAGCCTCTCCTTCAGCTGTGGCTCGTGCTGGAGCTTCTGTGTGCAGGCACCACCTCCGATTTTGCTAGAGTTTACCCGGACAAGGACCTAAACACGTACCATGCTCTCGCGACAGTTCCGAGACTCTTACCCCTGCTCTCGCGACAGTTCCTGGAAAGAGGACTTGTGCACATGCTCCTGCTCTCGCGATAGTTCCTGAGGCACAGGCCTGTTCAGACACCTCTGATCTCGCTGTAGCTCCTGGGGCTCGGAGATGGACAAGTCCCCCTGATATCCCGGCAGCCTGAGGAAAGACCCCGGACAGGAGATATTTTTGAAGGGTATAAAGGAAATGTAAAGGGGTCTGGTTGATGGCTGAAAGGGAGTGAGAATTTTAAAAAGTCACCAGAACAGACTGAAGAGCTCTGAGGACTGGAATTTAATTCTACTGGCATGGGGAGTGCCACAATCATATATAACATTGAAAAGCATGAACTTGGGACTATGTGGACAGTGAGTGGAGAGGCAGAGATACCTGGGAAGATGCTGCGACCATGAGGCAAGAGGTAGCTGTGGTCTTTACCAGAGTAATGGCAGAGACATGGGGATAAAGGATGGACTAAATCTGGGGGATGTAATATACAGCAGAATGACTATAGTTAATAATACTGTTTTGCATATTTGAAAATTGTGAAGAAAGTACATTTTTAAATCCTCCTCACAAGAAAAACATTGTAATTGTATATGGTGATGGATATTAACTAGGCTTATATAGTGATCATTTCATAATGCATACAAATATTGAATGATTATGTTGTATACTTGAAACTAGCACATGTTATATATCAGGTATACCTCCGTATAAAAAAATGGACTAGGAATGGCTTCAGAAAGTGGAAAGGACAGGACATGGAGACTGGATGGGAGGATGAAGAGTCAAAGTGGGGGCCCAGATTTCCAGGCTAGGGGGATGGAGGCATCAACCCTAAGATGGCAGGCATAAGAAATATAGCTGGGGCAAGGGTGAGAAGTATATGTTAGTTTTTTGAATAAATTGTTTAATTATAGAATATATTATTATTGTACAAATGTCAACACAAAAGAATTAAAATTCCTCTATTCTCCCTCTCCCCCCCAAAATGGGCAAAGGACCTGAACAGACATTTTTCCAAAGAAGACATACAAAGAGTTAAAAGGTGCATGGAC TCONS_00084812 r 5' 1990 TCONS_00084812 r 5' 1990 EMBV3_24146 GCTTCAGACAGAGGAAATAAAAGATGAAAAGGGGATGCTCTGTGCTTTGGACAACCAGGC Gene BVT0102_330444 + 1 EMBV3_35791 GK000027.2:14699713-14706020 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155967 1 XLOC_094895 Coding TCONS_00155967 XLOC_094895 Coding Coding LRP2BP 27:14673824-14704960 j TSS116614 2599 1 TCONS_00155967_4 348 0.117352828010773 11 0.916878111450137 0 1.23668642457245e-93 2.17390398597172e-162 0 7.21276773074125e-56 1.00134121015984e-117 2.98665444604527e-05 5.37635000430594e-215 3.57117209966783e-95 1.84731374382579e-05 1.5371075606476e-130 6.49082637651611e-06 4.34093823299678e-06 6.10633696405653e-05 4.74496752047918e-57 3.86516206845684e-60 0 1.85815436704469e-71 3.12692158721429e-243 6.81516375168822e-316 7.48804753609434e-79 5.00898276439093e-106 8.44289772410886e-156 6.6621705057071e-05 1.57307578010263e-230 4.27118787414585e-115 1.29354449680437e-90 4.47157779897533e-148 1.19722205397685e-155 2.31329373352923e-06 XM_616622.7 LRP2BP PREDICTED: Bos taurus LRP2 binding protein (LRP2BP), mRNA. 0.0 3341 100.00 0.71219699884571 NM_018409.3 LRP2BP Homo sapiens LRP2 binding protein (LRP2BP), mRNA. 0.0 1393 87.72 0.429011158137745 TCONS_00155967_4 sp|Q9P2M1|LR2BP_HUMAN LR2BP_HUMAN LRP2-binding protein; 0.0 665 91.09 0.997126436781609 4 coding 0 0 0 0 -0.0964997713606101 0.653889242257274 -0.0245746615316068 0.66289156912637 AGTTCCTAAGCAGTTTTTTTTTTTCTTCTTCCCCAGGTTAATCTAGCTAAAAGCTAAAGTTCCAACCATGTATTTATTTTCCCTAATATCTTAATCTGTTCCCCTCTATGTGCTGGTACCTTTTGAGAGCAAGACTGAAAGTTTATTCTTTTTTTGGAGAACAAGCTCAGTGTCCTCTGAAAATAGATGGGTGGCCTTTTTGTTCTAATTTTGGATACAGTTTCTTGTTTATTTTGTAATAAGAGCCGTAAACTAATTTTGCAGTAATTTATATTACTAGATTTATGCAGTTGATCCAAGGTGTCAACTTAGAGAAAAATGTGCTGCATGAGAGGTGTGAGTTAAAGTTTATTCAGGGTTTTACTGAGGACTGTAGCCCCAGAGACAGCCTTCAGATAGCACTGAGGAACTACGCCAAAGAAGTGGGGGTGGGGAAGCTAGTTTATATGTGATTTTTTTGATGTTAGGGAATACATGCAGTCAACATGTATCTTGGTAAAAAAATCACTGCTAGTTACAGAGAACAAATATTCCAAGTTAATGATTATAGTGCTTTTCTATGTATGGGAAGCAGAATTCATTAAAATTCTTCGGGAAATGCATTTAACTAAGGGCCTGGTTGTCCAAAGCACAGAGCATCCCCTTTTCATCTTTTATTTCCTCTGTCTGAAGCACTGAGTGCACCTCCTGTTACCACCTTAATCTCTTCATCTGAAGTATCCAGTGCCTTGCTGCCTCAAAGACTTGAATACCCACTGTGGAGACAGGATGAAGTTGACCAGTGAAAAGTTGCCCAAGAACCCCTCATATACTTCTCTATCCCACTTCGCTGCTAAGAATGCAAAAGTCTTCCAGTGGAGAAAGGAAAAGACTGATCATTACAGCCATGCTAATTTGGTGGATAAGGCCTTGCAGCTCTTGAAAGAAAGGATAAGAAGAGGGGATACTATGGCATATTTTCTACGAGGTCAACTGTACTTTGAAGAGGGATGGTATGAAGAAGCATTAGAACAGTTTGAAGAAATCAAGGAAAAGGATCATCAGGCAACTTACCAGCTAGGAGTGATGTATTATGATGGCCTGGGGACAGCTGCAGACTCTGAAAAAGGAGTGGAATATATGAAGAAAATTGTTGATTCTCCATGCCCCAAAGCAAGACACTTAAAATTTGCAGCAGCTTACAACCTTGGAAGAGCTTATTACGAAGGAAAAGGTGTTAAACGATCAGACAAGGAAGCTGAAAGACTGTGGCTTTTTGCGGCAGACAATGGGAACCCAAAAGCTAGTGTGAAGGCTCAGAGTATCCTAGGATTGTATTACTCAACAAAGGAGCCCAAAGAGCTTGAGAAGGCATTTTATTGGCATTCAGAAGCTTGTGGCAATGGAAACCTGGAGTCCCAGGGTGCCCTGGGGCTCATGTACTTCTACGGACAAGGTATCCGCCAAGACACTGAGGCTGCCCTGCACTGCCTGAGGGAAGCAGCGGAGCGTGGCAATGTCTATGCTCAAGGGAATCTCGTGGAATATTACTATAAGATGAAGTTCTTTACAAAGTGTGTTGCATTTTCCAAAAGGATCGCTGACTATGATGAGGTTCACGACATCCCCATGATAGCCCAGGTCACGGACTGTCTCCCGGAATTCATCAGCAGAGGCATGGCCATGGCCTCTTTCTACCACGCGCGGTGTCTGCAGCTCGGCTTGGGGGTCACAAAGGATGAGGCGACAGCCAAACGCTATTATTCTAAAGCTTGTCGTCTGAATCCTGCATTGGCAGATGAACTTCACACTTTACTTATTCATCAAAGAATTTAGATCACAATGCACTTCAACAAAGATCATCGATTCTAACAGCTTAGAATAACTTATGTTTTATATCAAGAACTTGGCAGGAGCAGAACCCAGGCCTCACCTGGAATGTTCTCGAGCAGCTTCTGCTGGGCTCTCTGCTTTGTTTCCTGGCTGCGCGCGCGGCTTTGTTCTTGGCGTGGGATTGTGTTTGGCGGTGCCGGCTTCCCATTGGGCCAAAAAGCATCCCGGAAAAGGTTGATGTAGTAAACCAACATTTGCTCACTGAAAATCCAGTTCACTGTGTCCCGAATTTGTCTTTTAAGAGAAAACTACGTCTCAGATGAGGTTTTTAAAAATTGTATTCTCTCTTTCTCAAAAGGCATTTATCAGTGGGTAGGTTAAGATACAGTGTGATCTAGGCGTTTGATGAATAAACTAGGAATTGGATTTTTAAACACTGACTCTGAAAGTTATTTTTCATTTTGGTAACACTGATGGCCATTCATTCCTGCAGCTCACATTTCCACTGTTACTGACTTCTCTAAATGTTTGCCACACGGTGTCTTTCAATTTTGAAAGGCAATAACTGAGAGGAGATGGATTCATTTGAAGTTGGCAACTACTCTAACTGTGCACGGTACTTAACATACTAATTTCTCCATAAAGTGTTGCAAGCTGAAAACATCCATCCATGTAAAGACAGCGAAAAATGGCCTGAAGACCTTCCTGAGCTCTGGCAGTCCCGGGGAGAAGCAAGCTTTTTCACTGGTCGTCCCTTGGGGCTGCTGTGGAAGGGGGTGCTGGGCGG EMBV3_04044 GTGGCCCAGTCCACTTTGTCCCTTTGGTTTTCACCTGTGCTGACCATCTCACATAAACAG Gene GeneID:527411|TOP3A:NM_001077975:60_cdna Constitutive 0 NULL GeneID:527411 19 GENE TOP3A MGC142307 topoisomerase (DNA) III alpha EMBV3_26047 TATGGTCCTTATCGGCTTCCCTGGTGGCTCAGCGGTAAAGAATTTGCCCACAATGCAGGA Gene BVV0102_268343 - 1 EMBV3_09762 GK000006.2:67069075-67147449 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20514 TTCCCTTCAATCCATTAGGTTTTGAGTGTTTTGACCTGCCTGAGGAGCACCAGATCACCC Gene GeneID:539883|PTTG1:XM_002688982:2_cdna Constitutive 0 NULL GeneID:539883 7 GENE PTTG1 NULL pituitary tumor-transforming 1 EMBV3_28720 ATTTCCATACGTGGTTGAGTGTACTGAGCTATGCAAACTGGTGTCTGTAGCTGTATGAGC Gene BVT0101_018861 + 0 NULL GK000006.2:87910887-87922651 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205698 TCONS_00205699 TCONS_00205697 TCONS_00205700 1 XLOC_124728 Coding TCONS_00205697 XLOC_124728 Coding Coding GRSF1 6:87918592-87940532 j TSS153549 6365 1 TCONS_00205697_1 362 0.281382560879811 10 0.710333196590547 2.164223812556e-09 0.000529088576754071 7.00688357555423e-07 1.87571698153894e-07 0.000230067886040235 1.16894662814549e-08 0.000123581443185203 0.000182531639591976 0.000239118630654293 3.07082111801584e-05 2.55511123266946e-18 3.12040581230522e-05 5.92029240178674e-09 8.02721984431623e-10 2.86019998099104e-05 0.000943947778221141 0.00116491921108745 0.00027569829253947 5.79845775279652e-05 0.000148494589990147 5.39898708133207e-07 0.000909571950402093 0.000643849950592373 0.000759297770312002 2.74526500713887e-36 0.000348367008993359 6.20645828100275e-07 0.000309940019218816 0.000109200242393945 0.000286777080413305 NM_001077971.1 GRSF1 Bos taurus G-rich RNA sequence binding factor 1 (GRSF1), mRNA. 0.0 4060 99.91 0.354281225451689 NM_002092.3 GRSF1 Homo sapiens G-rich RNA sequence binding factor 1 (GRSF1), 0.0 3175 85.44 0.435820895522388 TCONS_00205697_1 sp|Q12849|GRSF1_HUMAN GRSF1_HUMAN G-rich sequence factor 1; 0.0 715 95.01 0.994475138121547 3 coding 0 0 0 0 1.07557639743426 0.101336372657951 -0.133262632698292 0.0243699013970022 GTAAGTGTGACTGGGGGTGAATGTTGAGGCCTTGTTTCCCGCCGGCCTATGGAATCCAAAACTACCTACCTGGAGGATCTTCCACCTCTCCCTGAGTATGAATTGCCTCCGTCCAAGTTGGGCGAGGAAGTGGATGATGTTTATCTCATTCGAGCTCAAGGATTGCCATGGTCTTGCACTGTAGAAGATGTGCTTAGCTTTTTCTCAGACTGCAGAATTCGCAATGGTGAGAATGGAATTCATTTCCTCTTAAATAGAGATGGGAAACGAAGGGGTGATGCCTTAATTGAAATGGAGTCCGAGCAGGATGTGCAAAAAGCCTTAGAAAAACACCGCATGTACATGGGGCAGCGGTATGTGGAAGTCTATGAGATAAACAATGAAGATGTGGATGCCTTAATGAAGAGCCTGCATGTCAAATCTGCACCTATGGTAAATGATGGAGTGGTTCGCTTGAGAGGACTTCCTTATAGTTGCAACGAGAAAGACATCGTAGATTTTTTTGCAGGACTGAATATAGTAGACATTACTTTTGTCATGGATTATAGAGGGAGAAGAAAAACAGGAGAAGCCTATGTGCAGTTTGAAGAACCAGAAATGGCCAGCCAAGCCCTTTTGAAACACAGGGAAGAAATTGGCAACCGATATATAGAGATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTTGGTTCTCATAAGGGAAAAAAAATAGCATCTTCTCCCACTGCTAAATATATAACTGAGCCAGAAATGGTCTTTGAAGAGCATGAAGTAAATGAGGATATCCGACCCATGACAGCTTTTGAAAGTGAGAAGGAAATAGAATTGCCTAAGGAGATGTCAGAAAAGATACCAGAGGCTGTTGATTTTGGAACTACGTCTTCACTACATTTTGTCCATATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGACATTATAAATTTTTTTGCTCCATTGAAGCCTGTTAGAATCACCATGGAATACAGTTCCAGTGGGAAGGCCACTGGAGAAGCTGATGTGCACTTCGATACCCATGAGGATGCTGTTGCAGCTATGCTCAAGGATCGGTCCCATGTTCATCATAGGTATATTGAATTGTTCCTGAATTCATGTCCGAAAGGAAAATAAAACTTCAAAGGATTCCAGATAATAAGGATGAAGCAAGAAGCATTTCATTTGCACATCTTTCTTGGACTTGGGATCTAAAGTTCCAGTTTTTTAGCAGCAACTGCTAGAGAAGCGATTTCAAGATTTTGGGTTAATTGCTTAAAAGAAAAATTACATAGTGGACTGTTCAGAGAAAAAGATTCAGTTTAGAATTATGATACAAACCTCAAATTTAGTTTTTTTGTTTAAATTGTCCAGGATCTGGTTTAAAAATCTGGTCTTTATTTTATATAATTAAAGTTTGTTTTCATAGATGATTTGTGACCCAGAAGGCTACATATTTTTATTCAGCACTGTCCTTTAAAATATTTCTCCCATTTTAAAAGTTATCCGTTTGAGGTTTTGGATTTTGCCTATAAATTAAGAGATACAATGTAAAACTTTTCATGGAATAAAATACTGATTTATTTTAGCCAAATACTCACCAAAGCAAGGAAAAGTTTCAGGCCCTTGAACCATTATAGTTTTGCAGAGTTATTTTAATTTTAGATGTATTTGATTACTTAGATGGGGTAGGAATTAAAAAAACAAAACAAAATAAATACCACATGTTAGTGAGTGTAAATGACAATAATTTGGCAGTTTTATGTCTTAGAAATGTTTTGCCTTTTTCAGCCTTGTGCTAAAGGCATTTAATATTGGTGCCTGTATAATTAAGGAGGGAATTATAGTCTCAACTTAAAAGTTGTCTAACCCATCCCCTCCTCATCCCAGTGAGCTCCCCCCCCCCGCCCCCCCGCTCAATCATCTTGTTTTGATTTTGGGGTAAACCTTAAGGTGTGTGTTAGTCTAAGAACTGTGAAGTGACATGTCATAACAGTCCTGACTTGTAAGGACATTAATGGCTTCACTTGAATTTAAACCAGCTCTAGGTAGGAAAAAAATCTTGTCTCCTCATTTGCTTTTTCAGTGGGGTAGCACATCCCATATTTTAGAACAAGTAGGGGTGCCTTGCTTAAATAAAAATAGCATTTAATGTATAATTGTGTGAAAGGTTTATGGGTAAAGCTGTATTTCTGTCACATTGTGGCAGTATCTTCTGCTTTAATATTAAACAGCTTGTTATTTAAATACTGGATCAAAATGGCTGGCTTCAAATTGTAGTCATTAATAAACTAACTTTATGTGAACCTGTGTAGGAGAATCAAAGTTCTGTATAGTTTCTTTGCCTTGTTCCCCTTCTCAGGGTGACAACTGTCACGTGGTTACCAGGAGATGCAATTCTAGTTCTTAAAGTTGAATTAGCCCAGATTTCTGAGAGGTGGTATCTGAAAGAGAGATTATGCCTTCTCTCACTTAAATCATAACCATCTTTGAATACCAGCTAAGATGAAATCGCTGTACTGTAAGTAGTCAATAAATGAAGACTTATTTCAGGCTGAAGATTACCTAAGAGTATTTATTTTGGAGTGTGTGAATCAACCTAATATATTTTTGTTACGTCAAGTCCTGGTCTATTAATATAAGAAGAAATGGTTAATTTTTAGTTGTGTTTGTTTTTATCATCCTATAAGAATGTGATTCAATCAACCAGCTTAACATCTTCCATGTTACTACCTAGATAGAAATGTATTTCCATACGTGGTTGAGTGTACTGAGCTATGTAAACTGGTGTCTGTAGCTGTATGAGCTATTAGAATATGATCTTTTCTCTCTCTCTCTCTGTACAACTCTTAGAAAAGAATGAGAGCAAGATGTTCTGTGGTGGGTAAGCTTGAAGGGATATATCTTCTTACCATACTAGTGGCCAAGTTCTCAAAAAAAAAAAACAAAAAAAAACCCGGCGTGCATTCTTGGGAAGTCATCTTATGAATTCATGTAATACTTTCCAATACTCCCTTTAATAGGTTATTGCTCATAATTTATGTTAGTAATAGCTGACAAGGCAAATGTAGTGCAGGAAAGAGAAGAAAAGCAGCACATAATAGAATAAAAGTAATTTTTATTTTTATCCAATCTAAAGACATACTCCCCCCCGCCCCTCAAAATGTGACAAAACTAGTTTGTGCATCATCATTTTCTATTGAAAGAATAGTGGCAGTGAATTTGCTCTTGTCTTTGGGTCCTTTGTGTCTTTATAATCTCCTCTGTGGTAAAGCTGTCAAAAATAGTGGGATTGGATGTGTCAAGGTTTACCTGTATCCTCCTTTGGGCTGCTCAAAAGAATTACAAGGAAGGGATACTGATAAGGAGCATATAGATACCAAGGGGAAAATTGCTGAAGACTGTGTTCTGATCTGACATACTGTTAGCAGAGAGTGAAGCAGAACCGTTTTGTTTGTCCCTCTGTGTCTGGGTGAGAGGCTTCTGCCAGGTGCGGGGGGAGACTGAACCCACTATGGAGCGAAAGGCTCTGAATCCTCCTCAGTATTTCTGCAGTGTGGCCAGGAAGAACCAGGAGAAAGCCACTGCTATTATGTGACATTCTGAGGAAGTGACCCTGCTAATTATTAGTTAACATACTCTATTGGCATCCTCTGCCCTACAGTTCCTTAGCACAATGGTCTGCAACCTTTTTGGCACCAGGGACTGGTTTTGTGGAACAATTTTTCCACAGATGGTTTCATAATGATTCAGGGGCATTGCATTTATTATGCTGCAGCTGATCTGATAGGAGGGGGAGCTCAGGTGGTACTGTGAGCAATGAGGACTGGCTGTAAATGCAGATGAAGCTTTTCTTTGCTTGCCCGCCTTCTGCTCACCTCCTGCTCTGTGGCTCAGTTCCTAACTGGAGTGCTCCATGGCCCAGGGGTTGGAGACCCCCTGCCTTAGCAGGTTCTCATTTGAGAGATTTTTCTCTGGGTTACATCCTATTTATCTTATAATTTAAAACATACTGTTACTTTGAGAATTTTCCCTAAATTAAGTGAAAGGGTTGACATTGAATTAATAGGACCTGAATTAGTAGAATGGCATATTTCAGCAGTAAAGTGCCTAGGTTTCAGCAGTTTAGGAAAAAAAAAATTGCTCTAATGTAGTAGGAATACATTTTCCTTGCCTGAATTCAGCAGATTAAAAAATAAATCTCTGAAGTTTGTACTAAGGGAATAAAGCTGCTATAAACATTTGTGTGTAGGTTTTTTGTGTATACATGAGATTTCAGCTCATTTGGGTAAATACCAAGGAGTGCGATTGCTGGATCATATGGTAACACTATGTTTAGTTTTGTGAAAACCTGCCAAAATGTCTTCCAAGATGGTTGTACCATTTTGCATTTCCACCAGGAATGAATAAGAATTCCTGTAGCAACTCATCCTTGCCAGCATTTGGTGGTGTCAGTGTTTTGAATTTTAGCTATTCTAATAGGTGTGTAGTGGTATTTAGTTTTAATTTGAAGGTCCATAAATTGTATAAGATATTGACATCCTTATATACATTTGCATGGGCATGTTGTCTTTGGTGAATTGTCTGTTCAGATCTTTTGCCCAGTTTTTTAGTTGGGTAGTTTCCTTACTGAATTTTAGGAAGAGGACTATAGGGAGATTTGATTTGGTTCTAAAGCCTTGATAATACAAGAATAAACAGGATAATTTAAAGTTTTTGTGTTTTTACTTTTTGAAGGAAATAAAATTCAAGAGATACGAAAGGGTATATAGTGAACAGTCTCCTTCCATCCTGTACTTCAGCCACCTAGTTCCTCTTCTCAGGCAACCATGTCATCATGGTTATATTTTCTAATGTAAACTTCCAGTGATTTTACTATATAATAGGTGAATATTGGCATTTTCATTTATTTTAAAAATATACTATTCTTTACCTTTTTTTCCCATTTAATACATCCTAAATATTTTATATTGGTACATAAAATCCTTTCTCATTTTTTAAAATGGTTATACAGTATGGATGTAATTTATAATTTAACCTGTCATTACTGATGAACATATAAATTGTTTATAGTCATTTGCTATTTTAATGCTGGAATGAATTACCTTGTATAAATTTAGATCATTTTGTACATGCATAAATTTCTCTATAGGATAAATGGTCAGAGCATGTGCACTTGTAAACTTATATCTAAAATTCAGTTTCTATCTATAGCTTGTTTTTTCTTAGTTTGCACCAGCAATGCAAGTCCCCATTTCTCCACAACCCCCTCAAACAGTGTATTAGCAATCTACCCTTGCCAATCTGCCAAGGTTAAAAATACACAATTTCTTCATATTTAAAGGCTTTTGGATTTTCTTTTGTATGAACTTGTCTTCATAGCCTGTCCCCATATTTCTTTTTCTCTTATAATCCCCATCTACTTATCCTCATTAATTTTAAAACAGATTCAAGATAACCATCATTTTTTCTGAATATATGTATATCCTATATTTCTTTTTAAAAATAGGACTTTAGGGACTTTCTTGGCTTAAGACTTGTGCTTCCAATTCAGGGGGGGTGGGTTCAAGCTCTGGTCAGGGAACTAAGATCCCACATGCTGCTCAACCCCCCCAAATTTAAAAATAACCATTACTCCTAAAAATACTAGTTTCTTATCAAATAATTTCTCAAAAAGTACATTTGAATCAGGATCTAAGCAACAGTCCATACCCTGCAGTGGTTATTATGTCTCTTTTTCCTCTGCAACATGTTTTAATAACAAATTTTAATAAAAACTTCAAATATTTGGAAAAATTGAATGCCTATACATACTACCACCTAGATTTTGGAAGTAACATTTTACCATATTTTCTTCATGTATTTATGCTTCCATCAATGCATTTTGTTTATGTGTGTCCAAGTTGTAGACATCTATACTTGAATCTTAAGCTTTGTAGCATCCGTATTATTAAGTAGACTTCTTATTCTTGGGGTAAAATGTACAGTGATGTGAACAAATGTTACTTTGATGAGTGTTGATACATGACGCTGTAACCCAAACCCCTTACAAGCTGTGGAGCATTTCCATCACATCAGAATATTTCTGCAGTCGGTTCCTGTTCCTCCTCCGTCCTTTAAGGTTAGGATTTTGTTTTCACCATAGTTTCGTCTGTAAATAGAATCATTATATATTCTTATGTAAATTTCTCCCACTCTGCATTTGTTGACATTCATCTTTGTGTGTCAGCCCTTTGTTCCTTTTCATTGCTGAGTAGTATTTCACTGTATGAATATGCTATAGTTTAATTTTTCACTGGTCTGGTGAAGGGCTGTTTATTTTTTGGCTATCATGAATAAAGTTGCTATGAATATCATGTGCAAGG EMBV3_08933 TGGACTTACCAACTCCAACTCTTGAGAGCTGACAGTAAGGGGAAATGGGGCAGTGGGATG Gene BVV0101_051857 + 0 NULL GK000029.2:22869457-23489045 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163313 1 XLOC_099843 NonCoding TCONS_00163313 XLOC_099843 NonCoding NonCoding - 29:22900495-22901600 - TSS122399 1105 1 TCONS_00163313_3 89 0.600904977375566 1 0 3.86759520998068e-05 7.24779231511884e-11 5.09983097800906e-05 0 1.78143095978011e-10 0.00050477901866797 1.00944425046224e-10 5.4428176879066e-12 0.000159823876693688 0 0 0 6.70398259197279e-06 0 8.49598251123071e-06 0 0 0 0.000248817696508386 4.12397851069588e-24 4.07970733105416e-06 0 0 0 7.69108089614199e-06 6.98769289426628e-05 8.50190443762746e-11 0 0 0 XR_227899.1 LOC101907710 PREDICTED: Bos taurus uncharacterized LOC101907710 (LOC101907710), 4e-38 163 76.15 0.183710407239819 NM_183397.2 PXMP4 Homo sapiens peroxisomal membrane protein 4, 24kDa (PXMP4), 6e-23 113 78.32 0.120361990950226 0 noncoding 0 0 0 0 -0.0529361152688032 0.635927779790683 -0.019969784021472 0.735391484262467 CACGGAGTGTGGGCCACCTCACAAGGCTAGAGGCCTTCAAACATGAGGTCCGTAGTTTTTATGGGCTGGGTAATTTCACAGGTTAAGAAGTGGGTGGGGATTTCTAGGAACTTGGCTACCCCCCACTTTTTAGCCTTTTATGATTGACCTCAGAACTGCCATGGCACAGAGGGTAACATGCATTACCCACCCTTTTGAGTTGGACCCCAACAAGGGTCCTCCTGCCTGGTGTCATTGGAGCCAATACAACGAGACCAAGATCATTAGATTCAGAAGCAAAGAAAAGCGTTGCACGCTGATCAGCAAATGAAGAGGATGAGTTCGTGCTCTAGAGCAGGAGCCCCCAATCTCCAGGATCCAATGCCTGCTCATCTGAGGTGGAGCTGATATAATAATAACGGAAATAAAGTGCACAATAAATGTAACACGATTGAATCATCCTCAAATCAGCCCCCTGGTCCATGGAAAATTTGTCTTCCAGGAAACCAGTCCCTGGTGCCAAAAAGTTGGGAACTGCTGCTCTTGAGCACAGGTTTTTTGAGAGGCCGTGGGAGGGACTGCTTTATAGGGTTTGGGGCAGGGCGGAGGGGCGGAGTTCTCGCAGGGCTCCATGGGAGTGCTGCTCAGATCCTGCCAAGTCCTGGGCTAGTGCCTCTGCCCAGGTCCACCACCATCTTGAACTGAGCTGTCCGAGTTGGGTGCAGACGTTTCCACTTGGAACCCTGGCCTGAAGTGTCCAGTGCAACGCCTTCACATTGCAGTTCCCTAGGAGCAAGTGAAACTAGATGAAGCAGAGGGAAAAAAAGGTTAGACTGTATTTTATTATTCAGTTTCTATTTTTATTTCTCAGGAACTATTAAGGGGCTTTGCTGGCGATAGATACTCTGGTTATTGTCTTGTCCTATGTGATGGTCATGGGCCATCCCACTGCCCCATTTCCCCTTACTGTCAGCTCTCAAGAGTTGGAGTTGGTAAGTCTAAAGGAAACACAAGAAGGAAGTGACTAAAGATTAAACTAGGTGAGAGGTTTCACCAGGCAGAAACGCTATTGAAGAGATCAGAAACAGAGCAGAGAGCTACTTTACTGAGAGTGAGGAACTTGGAT TCONS_00164654 TCONS_00164655 TCONS_00164656 TCONS_00164657 TCONS_00164658 TCONS_00164659 TCONS_00164660 r 5' 31025 TCONS_00164654 TCONS_00164655 TCONS_00164656 TCONS_00164657 TCONS_00164658 TCONS_00164659 TCONS_00164660 r 5' 31025 EMBV3_14364 GCTGGAGAACCAGCTATGTTTGAATAGCCTGAGACCCCCATTTAGCCATCCCTTCCAAAG Gene GeneID:515331|PTGDR:NM_001098034:61_cdna Constitutive 0 NULL GeneID:515331 10 GENE PTGDR MGC155305 prostaglandin D2 receptor (DP) EMBV3_25205 TCCCCAAAGCCGCCAAGCTCTTCCTCCTCAAGTGGTCGTTCTACAGCTCCATGGTGATCC Gene GeneID:789747|LOC789747:XM_002688751:105_cdna UTR3_Alt 3 NULL GeneID:789747 7 GENE LOC789747 NULL similar to MHC class II regulatory factor RFX1 (Transcription factor RFX1) (Regulatory factor X 1) (RFX) (Enhancer factor C) (EF-C) EMBV3_32730 GTCACTAGAGGATTTCTTTACTACTTGGGGCTTTCCGAGAAGTGTCTGTGCTTGGGTAGT Gene BVT0102_172012 + 0 NULL GK000011.2:667071-1012169 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13319 GGTGGTGGGTATGGTGTGTTCTTGGATGGGGAAGAAAAGCTCCACTGACCTGTAGGAGAT Gene GeneID:541003|UBE2D2:NM_001046496:32_cdna Constitutive 1 NULL GeneID:541003 7 GENE UBE2D2 MGC138112 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) EMBV3_27517 TGAGGCCACGTGTGTTTGACTAAAGACCCATTTTGGCCCAGGTATTTATCAGGTGTTTTG Gene BVT0102_122609 + 0 NULL GK000005.2:113634321-113843641 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196591 TCONS_00196593 TCONS_00196594 TCONS_00196592 1 XLOC_118382 Coding TCONS_00196591 XLOC_118382 Coding Coding TCF20 5:113671802-113685282 j TSS146251 5826 1 TCONS_00196591_6 1055 4 0.568068847837377 0.00962671502984459 0.0104415285158995 0.00529323574600169 0.0054212087559033 0.00335493582345103 0.00473834873772492 0.00120949785036026 0.00468783431729337 0.00704778093835879 0.0023462687112425 0.00199980180123183 0.000496864901664917 0.00349864533841035 0.00313813587306074 0.0025636317993987 0.00138501138843345 3.62824031378004e-94 0.00620424801677552 0.00376677406120273 0.00580025358698347 0.00389289869978424 0.000179174290905655 0.000199369294155915 0.000867367261184551 0.00349684156818697 0.00634061081348284 0.00168047300478827 0.00131407814930999 0.000311865003877581 1.22233950399692e-58 XM_005207399.1 TCF20 PREDICTED: Bos taurus transcription factor 20 (AR1) (TCF20), 0.0 6302 99.97 0.60006865774116 NM_005650.2 TCF20 Homo sapiens transcription factor 20 (AR1) (TCF20), transcript 0.0 4275 88.71 0.566598008925506 TCONS_00196591_6 sp|Q9UGU0|TCF20_HUMAN TCF20_HUMAN Transcription factor 20; 0.0 1937 93.47 0.999052132701422 0 coding AGGCTGGGGAGGAAGTAAAGGGGCCAGCCGGTGCCTGGAGGAAGAGCTAATAAGTTTCCATGTGGAAAGGCTGGTGGCCTGTCCCAGAAGCAAGGAGACGACAACAGAACTAGAGCAGAGAGTGGCAGAGGAGGAGGTCAGAGAGGTTATGAGGTGGCGGCGGCCTTCCCAGGCCAGCTCCACTTGGGATGCGATGGGGAGCTACCGCAGGGCTTGGACATGAGGAATCTACTTAACCTTTAAAAAGCACCACGGCCTTTCCTGCTGGCAACTCCTTTTTCAGCTCCCCTGAGAGGGAATTTAAAAGGAGGGCTGCTGGCCTGCTGCTGCGCTGCTGAGCAGTATGCAGTCCTTCCGGGAGCAAAGCAGTTACCACGGGAACCAGCAGAGCTACCCCCAGGAGGTGCACGGCTCATCCCGGATAGAGGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGTGCTGGTGGTGGCAGCAGCGGCAGCGGCGGCGGCGGCGGTGGTGGACGACGAGCAGCGGCGGCGGCGGCGGCCGCGATGGCCAGCGAGACCTCCGGCCATCAGGGCTACCAGGGCTTCAGGAAGGAGGCTGGAGACTTTTACTACATGGCAGGCAACAAGGACCCCGTGGCCACAGGAACCCCGCAGCCTCCTCCGCGAAGGCCTTCCGGGCCGGTGCAGAGCTACGGACCCCCCCAGGGGAGCAGCTTTGGCAATCAGTATGGCAGTGAGGGTCACGTGGGCCAGTTTCAAGCACAGCACTCTGCCCTTGGCGGTGTGTCTCATTACTCGCAGGATTACACGGGGCCGTTCTCTCCGGGGAGCGCTCAGTACCAGCAGCAGCCTTCCAGCCAGCAGCAGCAGCAGCAGCAGCAAGTGCAGCAGCTGCGGCAGCAGCTCTACCAGTCCCATCAGCCCCTGCCGCAGGCTGCCAGCCAGCCGGCGTCTGGCGCCTCGCACCTGCAGCCCATGCAGCGGCCCTCAACTCTGCCGGCCTCGGCCGCCGGCTACCAGCTGAGAGTGGGGCAGTTCGGCCAGCACTACCAGTCTTCTGCCACCGCCGCCTCCTCCTCCTTCCCATCACCGCAGCGTTTCAGCCAGTCTGGGCAGAGCTATGACGGCAGTTATAGTGTGAACGCCGGATCACAGTACGAAGGGCATAACGTGGGCTCCAACGCACAGGCTTATGGAACACAATCCAATTACAGCTATCAGCCTCAATCTATGAAGAATTTCGAACAGGCCAAGATTCCACCAGGGACCCAGCAGGGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCACCCCCCTCAGCACGTGATGCAGTATTCCAACGCTGCCACCAAGCTGCCCCTGCAAAGCCAGGTCGGGCAGTACAGCCAGCCCGAGGTTCCCGTGAGGTCCCCCAAGGCCTAATGTCTTAGTGAGTCAGACCAATGAGTTAGCTAGCAGGGGCCTTCTGAACAAAAGCATTGGGTCCCTGTTAGAAAACCCCCACTGGGGCCCCTGGGAAAGAAAGTCAAGTGGCACAGCTCCTGAGATGAAACAGATCAATTTGGCCGACTACCCAATTCCCAGAAAGTTTGAAATAGAGCCTCCATCGTCAGCCCATGAGCCCGGGGGTTCCCTCTCTGAGAGAAGATCAGTCATCTGTGACATTTCTCCACTAAGACAGATTGTCAGAGACCCGGGGGCTCACTCGCTAGGACACATGGGCGCCGACACCAGACTTGGGAGGAATGAGCGTCTCAATCCCAGTTTAAGTCAGTCAGTCATTCTTCCAGGTGGGCTGGTGTCCATGGAAACAAAGCTGAAATCCCAGAGTGGGCAGATAAAAGAGGAAGACTTTGAACAGTCCAAGTCCCAAGCTAGTTTCAACAACAAGAAATCGGGAGACCACTGCCACCCTGCTAGCATCAAGCACGAGTCTTACCGAGGCAATGCCAGCCCCGGAGCGGCGACCCATGATTCCATCTCAGACTACGGCCCGCAGGACAGCAGACCCACACCAATGCGGCGAGTCCCCGGCAGAGTTGGCAGTCGGGAGGGCATGAGGGGTCGGTCCCCTTCTCAGTATCATGACTTTTCAGAAAAGTTGAAGATGTCCCCTGGGAGGAGCAGAGGCCCAGGGGGCGACCCTCATCACATGAGCCCACACATGACCTTCTCCGAGAGGGCCAACAGGAGTTCTTTGCATGCTCCCTTTTCTCCCAATTCGGAAAGCCTGGCCTCTGCTTATCACACAAACACGCGTGCTCATGCTTATGGGGACCCCAGTGCAGGTTTGAATTCCCAGCTCCATTACAAGAGACAGATGTACCAACAGCAGCAAGAGGAATATAAGGACTGGGGTGGCAGTTCTGCTCAGGGAGTGATCGCTGCGGCTCAGCATAGGCAGGAGGGACCCCGCAAGAGTCCACGTCAGCAGCAGTTTCTCGACCGAGTCCGGAGCCCCCTGAAGAATGACAAAGATGGCATGATGTATGGCCCACCGATGGGGACGTACCATGACCCCAGCGGTCAGGACGGTGGGCGCTGCCTCATGTCTAGTGATGGTCTTTCTAACAAAGGCATTGAACTGAAGCACGGCTCCCAGAAGTTACAGCAAGAATCTTGTTGGGATCTCTCTCGGCAGACTTCTCCAGCCAAAAGCAGCGGCCCCCCAGGAATGTCCAATCAGAAAAGGTACGGACCACCCCATGAGACCGATGGACACGGGCTCGCAGAGTCTACGCAGTCATCCAAACCGAGTAACGTTATGCTGAGACTTCCAGGTCAAGAGGATCATTCTTCTCAAAACCCCTTAATCATGAGGAGGCGTGTCCGTTCTTTTATCTCTCCCATTCCCAGTAAGAGACAGTCACAGGATGTGAAGAACAGTAACACTGAAGATAAAGGGCGCCTCCTTCACCCGTCAAAAGAAGGCACTGACAAAGCGTACAATTCCTATGCCCATCTTTCTCACAGTCAGGAGATCAAGTCCATCCCTAAGAGGGAGTCCTCCAAGGACCTTCCAAGTCCAGATAGTAGGAACTGCCCTGCGGTCACCCTTACAAGTCCTGCTAAGACCAAAATCCTGCCCCCAAGGAAAGGCCGGGGGTTGAAACTGGAAGCTATCGTCCAGAAGATCACATCCCCAAACATTAGGAGGAGCGCGTCCTCGAACAGCGCAGAGGCTGGGGGAGACACAGTTACTCTTGACGACATCCTGTCTTTGAAAAGCGGCCCTCCGGAAGGTGGGAGCGGTGCCGTTCCAGACACTGAGCTGGAGAAGAGAAAAGGCGAGGTGATAGCTGAGCTGGCCTGTCCCGCAGGCCAGGAGCTGAGCGGAGAAAAGCCTCTGGCCCGGTCTTCGGAGGAGTGGCGCGGTGGTGGGGACGACAAGGTGAAGACGGAGACGCACCCTGACACGGTCGCCGCTGGGAAGGAGCCCCCTGGTGCCATGGCATCCACAACCTCACAGAAGCCTGGGAGTAACCAAGGGAGACCAGACGGGTCCCTGGGCGGGACAGCACCTTTAATCTTTCCTGACTCAAAGAATGTACCTCCAGTGGGCACGTTGGCTCCCGAGGCAAACCCCAAGGCTGAAGAGAAAGAGAGCGATGCCGTGACGATTTCCCCCAAACAGGAGGGCTTCCCCCCGAAGGGTTACTTCCCCTCAGGAAAGAAGAAAGGGAGACCCATTGGTAGTGTAAATAAGCAGAAGAAACAACAGCAGCCCCCGCCGCCACCCCCTCAACCCCCTCAGATACCAGAGGGTTCTGCTGATGGAGAGCCAAAGCCAAAAAAGCAGAGGCAGCGGAGGGAGCGAAGGAAGCCTGGGGCGCAGCCCAGGAAGCGGAAAACCAAACAGGCCATTCCCATCGTAGAACCCCAAGAACCGGAGATCAAGCTGAAGTACGCCACCCAGCCCCTGGATAAAACCGATGCCAAGAACAAGTCTTTTTTCCCTTATATCCACGTAGTAAATAAGTGTGAACTTGGAGCCGTGTGTACAATCATCAACGCCGAGGAGGAGGAGCAGACCAAATTGGTGAGGGGGCGGAAGGGCCAGCGGTCCCTGACGCCTCCGCCCAGCAGCACCGAGAGCAAGGTTCTCCCAGCCTCGTCCTTCGTGCTGCAGGGCCCCGTGGTGACAGAGTCTTCTGTGATGGGGCACCTGGTTTGCTGTCTGTGCGGCAAGTGGGCCAGTTACCGGAACATGGGCGACCTCTTTGGACCCTTTTACCCCCAAGATTATGCAGCCACTCTCCCCAAGAATCCACCTCCCAAGAGGGCCGCGGAAACGCAGAGCAAGGTGAAGGTCCGGCACAAAAGCGCTTCGAACGGCTCCAAGACGGACACTGAGGAGGAGGAAGAGCAGCAGCAGCAGAAGGAGCAGAGGAGCCTGGCCGCGCACCCCAGGTTTAAGCGGCGACACCGCTCGGAAGACTGTGCCGGAGGCCCCCGGTCCCTGTCCAGGGGGCTCCCTTGTAAAAAAGCCACCACCGAGGGCAGCAGCGAAAAGACTGTTTTGGACTCAAAGCCCTCCGTGCCCACCACTTCAGAAGGTGGCCCCGAGTTGGAGTTACAAATCCCTGAACTACCTCTCGACAGCAATGAATTTTGGGTCCACGAGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGGTCTGTGGCCGGCTCTATGGCCTGCAGGAAGCGCTGGAAATAGCCAGAGAGATGTAGAGACCCCAACTTGGACCTTGAGGTTCCACGGTGGCGCCATCAGGACTGCAGGTTCCGCTGTCTCCTTTAGTAACAGGTTTCATAACAGTTGGCCTACTTTTGTTTTTTAAAATTGAGATGTAATTGACATGTTGAAGGTTATGTTGCTTTCTTGACCAGTCTCTTAAATAAATCTCATACTGCCGCTTTATCTTCTTGTATTGTACTCACTCTACCAGTGCCCTTTAAGAATATTACATTTCTCTTCCCTTGACCCCATTCTATATTTTCCATCCCTCTTGTAGAACAGAATGCTAGCTTGGTATATGGAATTTAGGTTTTCAATACACTGCACATCTGTGTTATTCTCACGAGCCTCCCAGTGAGGTAGGAAGAGAGAAGACACAGTCCATCACGTCAGAATGCAGGCTGGCTGGGCTTTAGTGACACATGCCTGGGAAGTGTTAGGTTGGAAGAGAGAAGACCAGTCCGTCACATCAGAACACAGGCTGGCTGGGCTTTAGTGACACACGCCTGGGAAGTGCTGCCCCGAGTGATGCGTTGGTTTTTAAACTGTTTTAAAAAGTTATGCTTCTTGGCTCTTGGAACTGATGTTCCACTATGACTGCGAGATCCTTTTCAGTTTTATTTGTCTAGCTTTTATGCTCCATAATGTGCTTGAGAACAAATTAAAGCGACACTGACTTGACTTCCTTTTTTTAGTCTGATGGACGCTGTTTCAGTCTGTCGGGTCACTTTGGGCCCAGTTTCCCCTCAGGTTCAGTGGCGCCTTCAGCTCCGGTCTGCTCGGCGTGTCCTCAGTCCCGCCATGTGAGATGAGGCCATGTGTGTTTGACTAAAGACCCATTTTGGCCCAGGTATTTATCAGGTGTTTTGACAAGTGTGATATTTTCGCAAAATAATACAAAGTCTTCAAAACACACTTGTTCCTCTCCCTGTAAGCCTCAGTTACACTAACCTGAAAATAGCTGAAAGCTAGAACATTCCTGTACAAAGGGCTTTCGCTCTCTTTACATTTCTGAGTGTCTGTAACTAAATAAGGGGCAGTAACAATTGCCCTCTTACATCTAACAGGCTAACATCCCCC EMBV3_06637 GCATCATACCATGAGAGATTCTTGTGATTGGTGATCCTCCCCAGCCCCTACCCATTTCTA Gene BVT0102_135996 - 0 NULL GK000007.2:62810821-62856034 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217380 TCONS_00217374 TCONS_00217379 TCONS_00217376 TCONS_00217377 TCONS_00217373 TCONS_00217375 TCONS_00217378 1 XLOC_131494 Coding TCONS_00217376 XLOC_131494 Coding Coding CSNK1A1 7:62853061-62866018 j TSS161891 3344 2 TCONS_00217376_1 80 0.0532296650717703 4 0.742204384069157 1.43780536939518e-27 1.39358027632527e-10 4.32691177854473e-30 1.89488606440653e-18 5.22796493560996e-31 4.81914177815868e-05 0.00057508131277779 0.000580016847791562 4.66736371031699e-08 0.000576052605724683 0.000103728021300234 3.48544211077594e-07 0.000209377566275998 0.00050240855723502 0.00027433358799779 0.0075977233383273 0.00707714976644693 0.0149876797299342 6.43409261532554e-06 0.000346576784543125 1.35402083166611e-15 0.00183331698540229 0.00701447201677477 0.00842071266896232 5.28284460937092e-10 3.3338970112276e-17 1.41899932558366e-59 0.00116006121479043 0.00111848947036831 0.00127210327545396 XM_005209551.1 CSNK1A1 PREDICTED: Bos taurus casein kinase 1, alpha 1 (CSNK1A1), 0.0 5315 100.00 0.880980861244019 XM_005268376.1 CSNK1A1 PREDICTED: Homo sapiens casein kinase 1, alpha 1 (CSNK1A1), 0.0 2113 88.65 0.483253588516746 TCONS_00217376_1 sp|P48729|KC1A_HUMAN KC1A_HUMAN Casein kinase I isoform alpha; 1e-52 171 100.00 0.9875 0 coding 1 1 1 1 0.105089110956605 0.408193075305999 -0.0169964146354547 0.770213610155487 AATATCCACAATTGGCATATTGAGGCGTTAGAGAAACAAAGGCAAGCAGGGATTTCCTGCAGAATTTGCCATGTACTTAAACTATTGTCGTGGGCTGCGCTTTGAGGAAGCCCCGGATTACATGTACCTGAGGCAGCTATTCCGCATTCTTTTCAGGACCCTGAATCACCAATATGACTACACATTTGATTGGACAATGTTAAAGCAGAAAGCAGCACAGCAGGCAGCCTCTTCAAGTGGGCAGGGTCAGCAGGCCCAAACCCCCACAGGCAAGCAAACTGACAAAACCAAGAGTAACATGAAAGGTTTCTAAGCATGAATCAAGGAACAGAAGAAGCAGAGCAGATGATCGGAGCAGCATTTGTTTCTCCCCAAATCTAGAAATTTTAGTTCATATGTACACTAGCCAGTGGTTGTGGACAACCATTTACTTGGTGTAAAGAACTTAATTTCAGTATAAACTGGCTCTGGGCAGCATTGGTGATGGATGCTGTGTCCTGAGTTGTAGCCGCTGTAATTGTGAATATTAACTGAGATAGTGAAACATGGTGTCAGTTTTCTATTGCATTTTTTCAAGTGGAAAAGTTCACTAAATGGTTGACACACACAAATTGGTGGAGAAATTGTGCATATGCCAATTTTATGTTAAAATCTTTTATTTTGAACTATACTGCTTTGAGATCTCATTTCAGAAGAACGGCATGAACAGTCTTCAGCCACAGTTGTGATGGTTGTAATTGCTCACAATTGTGCATTCTTAGGGTTTATCCATCCCTGGGGTTTGCAAGTTGTTCACTTAAAACATTCTTAAAATGGTTGGCTTCTTGTTTGCAAGCCAGCTGATACGGTAGCAACCAAAGATTCCAGTGTTTGAGCATATGAAAGACTCTGCCTGCTTACCTGTGCTAGAAATAACAGCATCTAAAGTGAAGACTTTAAGAAAAACTTAGTGACTACTAGATTATCCTTAGGACTCTGCATTAACTCTATAATGTTCTTGGTATTAAAAAAAAAGCGCATATTTGTCACAGAAATTTAGTTAACATCTTACAACTGAACATGTATGTATGTTGCTTAGATAAATGTAATCACTGTAAACATCTATATGATCTGGGATTTTGTTTTTATTTTGAAATGGGAGCTTTTTTGTTTACAAATTCATTAAAAACTATAAACTGTTTCTGTAAGGAAATGAGATTTTTTAAAAAACAAAAAAATGCCTTGCTGACTCACTATGAAATCAAAATCTCCCCAATTTTTTAATAGACTACTTCAAGCCATTTGTTACGTAATATTCCTTTGGAAATCATTTTAGATTTACTGTCATAACTCTCAAATTTTTTATTAAAAAAAATTTTTTTTCCCTGAAGCGGAAAGGCATTCTTTCATTTTTCTTCTTTTTTTTAATGACCTGCAGACACAATACCTCGTGCTGCAGCACGTGCCAGGACTTGGTATTGTAACTTCTGCAGCTTCAAACTAACCGCTGGACTGATTTTGAATAAGAATGAAAGCGTTAAAGGGTTTATCTATAAAATGAAGCTATTCTTTAAATTCCTGGTTGATGGGCAGATTGACTCCTAATCTTGGAGAGCATCATACCATGAGAGATTCTTGTGATTGGTGATCCTCCCCAGCCCCTACCCATTTCTATAAATTATCTGCAGTTTATCTCTCAGTCTTACTGTGGCTCTTTTTCTGACCCAAGAAAAAAGCTTTCTATGATTAATTCTTTAGTGTAGCGTGAAAGTTGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGGACACAATCCGTGGAATTCTGCAGGCCTTAATACTGGAGTGGGTAGCCTTTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCCAGGTCTCCCGAATTGCAGGCGGATTCTTTACCAGCTGAGCCACAAGGGAAGTTAGTGTAATTTATTCATTTATAGCATGTCAGAATAAATTTAAAAACTTCTGTCTGAAAATGCTGCCAGGCGCCTATTGTGTAAATGTAGGTATTTTGTAAAAAATAACCTTGAAATTGTAAATTGACATGTGTTTGGTCAGATTGTGTCAGGTTTGTTTCCTTCCTTTTTTTTTTTTTTTTAATTTGAAAACTACATTAGCAATAATTAATTCAGTGATTACCACATTCTGCCATTAAAGGATATATTAGCACCATCATACTGCAGAAATCTTAATGAATATGAACTTCGGGGTAGGCAGCTTCTTTGTTTTCTTTCTATCCACCCGTGTTGGTTAAGGTATTTGTTTCTTGACTAATAAACCCTTTGATACTTTTAGCCAGAAATCAGTCTCATAAAGCTATTTTTGAGTATAGTTTGTGTAAAATAAAAATGTTTAGCTTTGGTAATAACTTTTCCAAGCTGAACTCCCTCTAGCAAGATATTTTTCAGTGCTTTTATTTACTATGCACTTAGACTATGCACTTTTTCTGAAATATTTTTGTAACACTTAACTTTTTTGTATTTTTGCCATTTGAAAAGGTTGTGGTGTAGTTGGTCTGTAATTAAGTTGCAGATTTAAAACTGCTGTTAGCTTTGTAAATCAAAATATAGGTGTTTTTGTCCTGGTATATTGTCGTTCCATCTGCAGCTGGAGTTGGAATCTCATTGATCTTCTAGCTACCATTCATTTTCTTCACAGTTCACGAAAGAAGAATGTGAAATTCAGTGAATGCTGTTATTAATCCTGTCGGGAGATGAATCTCATTTCACCAAAATTAAATTATGTTTTTCCACTAAAATGATGATACAAGTTGAAGACACATCACTCTGAAATTGGAAGACCTCACCACTTAAGGCTCCGCAGTGGCTTACTCAGCTGAACTCTAGGTTACTACTCTTTACTTTGTTCACCCATTGGGGGGTGCAGTTTTTTTAAATGTTGGGAGATGGCCATTCTAACTACTGTTGAATGTCTCTGTTTTGGGAAGGTATAACAAGAAAATAAAAAAGAATATATATGAAGGGAGAGACTGGTTATCTCCTCCCACATGGCTGTGCTCATGCTCCTATGGCCTACGAGTGGAACTTTGGAGGGTTGCTTTTGCTATTATTTTCCATCAACAAATACTAAGAGATTTTTTCCTATTTCTACTAGTCCTTGCAGTGTTTTGAGCAAACTATACTTTATAAACTTAATTCCATTGTAATAAAAATACCAAGCAAAAGGATTTTAGAAGCCAAGCCATTGAGCTAGTTTTCTCTAACATTTGCTGAGATACCAGTATTACGTTCTTGCAACTTGACTAGAATGAACCTTGGAAAGGGGCGTCCTAGACGTTTTCAGCTTAGCTCCTAAAAATTTGTCGGTAGTCTG EMBV3_10849 CAGGCGAGCGTCACGCTGAGGTCGGTTTCCCCGTATCCAGCTCCGGGGACCCGTCCGGCA Variant GeneID:509238|TAF1C:NM_001077888:17_cdna 114^990 1 EMBV3_23891 GeneID:509238 18 GENE TAF1C MGC139975 TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa EMBV3_03962 CGACCGGAAGCTGAGCAAGAACGAGGTGCTCCGCCTGGCCATGAAATACATTGGCTTCCT Gene GeneID:615458|LYL1:XM_002688746:89_cdna Constitutive 0 NULL GeneID:615458 7 GENE LYL1 NULL lymphoblastic leukemia derived sequence 1 EMBV3_38263 TCCTGCCTCAATCTTTGCCCCACCCTGTCTCTCCCTGTCCTTCTCTGGAAAATGCCAAAA Gene GeneID:505280|USP5:XM_002687863:102_cdna Constitutive 0 NULL GeneID:505280 5 GENE USP5 NULL ubiquitin specific peptidase 5 (isopeptidase T) EMBV3_05752 AGCCCACTGCCCTGTACGTCCACATTGCTGTAAACACCCAAGAAAGCCCCTGTCATTGTA Gene GeneID:615844|ENG:NM_001076397:205_cdna Constitutive 0 NULL GeneID:615844 11 GENE ENG MGC137842 endoglin EMBV3_12617 GCGTAAGGCATCTGTATATTTGCGATTTCCACAAATTGCAGACCAGACCAGGCTTCAATA Variant GeneID:533462|SAP30L:XM_002689322:40_cdna 500^646 1 EMBV3_42458 GeneID:533462 7 GENE SAP30L NULL SAP30-like EMBV3_22578 GGCTGAATCTCCTCACTGTTCACTTGAAACTACCACAACATTGTTAGTTGGTTATACTCC Gene BVT0101_031658 - 1 EMBV3_05169 GK000004.2:73414183-74560693 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04722 AGGCGTGGGCCGGACAGGGGTGTTCCTGTGTGTGGATGTCGTATTCTGTGCCATTGAAAA Gene GeneID:517883|LOC517883:XM_002707793:158_cdna Constitutive 0 NULL GeneID:517883 28 GENE LOC517883 NULL similar to protein tyrosine phosphatase, non-receptor type 20 EMBV3_41530 GGTCACCCCCAGGATCTACGTGGGCAACGCGTCTGTGGCTCAAGACATCCCCAAGCTGCA Variant GeneID:615432|DUSP3:NM_001076374:290_cdna 302^355 1 EMBV3_12550 GeneID:615432 19 GENE DUSP3 MGC152292 dual specificity phosphatase 3 EMBV3_11520 TCTGGGAAAGAAGGTGCGCGTTAAGTGCAAATGAAATCCACGATGGGATGAACCTGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12128 GCCTAACTTTTTCCTCTGCCTGGAACACTTCCTCTCCAAAACATCTCCCACTACCCAATT Gene BVV0102_019272 - 1 EMBV3_15499 GK000003.2:57391309-57410643 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173520 TCONS_00173521 1 XLOC_104372 Coding TCONS_00173520 XLOC_104372 Coding Coding SH3GLB1 3:57408088-57457635 = TSS128968 3895 1 TCONS_00173520_2 259 0.11219512195122 8 0.921547652686392 6.09468610195258e-06 4.20137987283729e-05 1.97822963142335e-05 2.54358101903921e-05 0.000101464577494038 2.07763612773573e-05 0.000178277563331735 7.12750260216174e-05 0.000143759741140174 3.08018971677657e-06 5.30097242689874e-06 4.17306281861798e-25 9.97864157713906e-05 0.000174626400446206 6.1373610555351e-05 0.000606365369438061 0.000340464960422131 0.000662201824094413 6.67472970048246e-05 2.62747371296815e-05 2.27766774414186e-05 0.000117597467698486 0.000349814866862587 0.00056576672640761 6.0167273340516e-05 8.7149691352861e-05 5.20935163809976e-05 5.50619254736818e-05 0.000166787981541818 0.000109651261164483 NM_001077993.2 SH3GLB1 Bos taurus SH3-domain GRB2-like endophilin B1 (SH3GLB1), mRNA. 0.0 1647 99.89 0.234916559691913 NM_016009.4 SH3GLB1 Homo sapiens SH3-domain GRB2-like endophilin B1 (SH3GLB1), 0.0 1449 93.63 0.244929396662388 TCONS_00173520_2 sp|Q32LM0|SHLB1_BOVIN SHLB1_BOVIN Endophilin-B1; 0.0 528 99.22 0.984555984555985 2 coding 0 0 0 0 -0.702400715697254 0.107466751442323 0.0107782619134426 0.854703121957687 TCGCTTCCTCGGTTGGGGACCCGGCCCTGAAAGGCCAGGACGCTGCTCTGTGTCTCGCAAGCCCACCGCGAAGCCCGCCGACGTTAGCGGTATCTCTCCAGGCGTCACAGGCCCTGGGTCTCGGCCGCTGCCGCCTGGACGCGCGGCCGGCTTCGAGGCGGTTGTTCTCTCCCCTCGCCCCACCCTCTCTCTCCCCCTTCACGGAAACGACAGCTGCGGCGGCGAGGCTGGCGCCGCCTCCCTCCACCTACCACGTCTGCCCCCGCCACTCTTGCCCGGCGCCCCAGCCCGGCCGCGGCGCCTCCATCTCCCCGCTAGGTCAGCCGGCTGCTCCGTCCGGCTGACGCCCAGGATGAACATCATGGACTTCAACGTGAAGAAGCTGGCGGCCGACGCGGGCACCTTCCTCAGTCGTGCAGTGCAGTTCACAGAAGAAAAGCTTGGCCAGGCAGAGAAGACAGAATTGGATGCTCACTTAGAGAACCTCCTTAGCAAAGCTGAATGTACCAAAATATGGACAGAAAAAATAATGAAACAAACTGAAGTGTTATTGCAGCCAAATCCAAATGCCAGGATAGAAGAATTTGTTTATGAGAAACTGGATAGAAAAGCTCCAAGTCGTATAAACAACCCAGAACTTTTGGGACAATATATGATTGATGCAGGGACTGAGTTTGGCCCTGGAACAGCATATGGTAACGCCCTTATTAAATGTGGAGAAACACAAAAACGAATTGGAACAGCAGACAGAGAGCTGATTCAAACTTCAGCCTTAAATTTTCTCACTCCGTTAAGAAACTTTATAGAAGGCGATTACAAAACAATTGCTAAAGAGAGGAAACTATTACAAAATAAGAGACTGGATTTGGATGCTGCAAAAACAAGACTAAAAAAAGCAAAAGCTGCGGAAACTAGAGCATCATCTGAACAGGAATTAAGAATAACTCAAAGTGAATTTGATCGTCAGGCAGAGATTACCAGACTTCTGCTGGAGGGAATCAGCAGTACACACGCCCATCACCTTCGCTGTCTGAATGACTTTGTAGAAGCCCAGATGACTTACTACGCACAATGTTACCAGTACATGTTAGACCTTCAAAAACAACTGGGAAACTGGCCTTTCTGCCAATAAAATTGCATGGTAAATATTTCATTACAAAAGTTACGTTAGAGCTTTCATGCCAAGAATGTTTTGTTACAAAATTCTCTTTCTACTGAGGTTTCACTAATACGTACCTTCTACTTTTGAACCCCAAATTAAAGCAGAAGAACTGTTTTCTACTGGATTTTTCATTAATGGCAAGCTTTTTCTTTTATGTAAAATAAATTTATTGTGAATTGATATCAGTGACTCATTTATTAGGTATAATTAATAGCCAAAGAATAAAGTTAAAATTTGTTTTTAACTTGGTTTAAAAAGAGCTCTAGGATATAAACCTCTTTTGTGAAAAATAGAATGTTTCTGAATGTTTTCATAAACAAAAACTTAGTTATACCATGTTTACCTTATTTTCCAGCAGTTATTAAATGATGACAATATTCTGTTTCAGTGAGTTATTTTGAGGGCTTTTTATTAAACACTACTGAATGATTTATTCTAAGACTAACTAGTCCTCAAGAAGTATTACTGTATTTCTCTAGTACATTTGCAGTTAAGGTTCTAAATCATCCGGGACAAACTCAATTTACTGAACAATGTTTCTAAGGTTGTTCAGTTGGCACCATTTAATCCATAATCAGAATTGGATGTGTTAAGATATTGTAATACAGTAAAGAGAATTTGTCCTTATTCAACAACAAATCCTTATAAAAATATGGATTTGCACAGCTGTGTTTGTTATAGAGTAAATTGTACGCAAACAATATACTTTTGGTTACTTTAAGCCTACAAATAAATTTTAAAAATTTACTAATGAACTTAGGTTATCCTAATCAGGCTCTCTAGTTCACACACTAATGAAACAATTAGTAATATACTTGGAATCAGAAAATTGCTGTGTGGGCTATTTCTATGAATCAGCAGATTGTTTCCATGTCAGGACTTCTGCTCTTATTTTCATTCATTCATCAAACATTTGTTGGGTGCTAGGCACTATGCTGATTAGCTTGGAATACGACCCTGACCAAGATGCACCAGATTCTTCCCCTTACAGATCTTAAAGACTGGTAGAGAATACAGAAAAATAAGGAAGCAATGGTCATATAACAGCACCAGTGTCATGATAGAAGGAAAATGCAATACTGTGTTTTGGAGCTTTGGGAGTCACCTAATTCAAAATTGGGTAGTTGGAGATGTTTTGGAGAGGAAGTGTTCCAGGCAGAGGAAAAAGTTAGGCCAGGCCTGGAGCTGAGAGAATGTAGTACATTCTGTCAGCTCAGAGTGGTTCAGTCTGACTTACATATTAAGTATAAAGGTGTAGTAAATTTCTTTAGGAAATGTTAATGTGCCAAATGATATGTTTTGGTACTTTGAAAAATGAATATTCAGCACAAAAGATGTTTTAAAATGGTGTTTAAGAGTTCTTAATGAGAGCTTGGTGAACATGTTGATAATTCAGTTTACAGTCCAAATTTTAACAGTAGCTGTTACATTTCTACTCTGTGAGACAAATTTCTCTGCAGTTTTATAGTTGTAAAAGATGATTTGATTCACCCTGTGAATTTCCATACTGTTAATCCCCAGATTAACTAACACGCTGGTTAGTTAGATTAACTAACTAACATGCTGGTTAGTTAGACATAAAACTACTTGAGTGAAGCTTTTTCCCCCAAAAAGGAAGCTCTACAGCCAGCCCAGGGCACCATCTATTATGTAAATCCAGATTTAGGCTTTAGAAGATCAAGTCAAAAAGATCAGGTCAGCTTTAATAGCAACTGTAAATTAGGCTTATGGGAAATAGAGTAGTAAAAGGGAAAAAATATGAGTAGTGAAGTGAAATTGTCCTGGGTTCAAATCCAGTCTTCTTCACGTACTATGGTCTTTGAGCTTCAGCTCAGATGTCATGTAAACTGCCATTTCCTTGGTAGTAAAATGGGGATAATAATTATGCCACCTTAAGGTTATTGTGAGGGTTTTATAGCAAAAAAAAAAAAAAGTTTTAAAAATAGTAATAAAATATCTATAAAATCTATACCTGTAGATTTTATAACTATCTTGTATGTTAGATAACTTGGGGGGAAAAGCTTGGCACACTGTAGAAATGTGCTGTAAAAATTTTTCCCCTTGTTAGGTTCTGTAGCTTCCTGACTGTTGGCCTTGTTTACAACTGTGAATCAGAGATTCATCTTCTATGTCCATGCTCTGCTCTGTTCCTTATTGATTGTATTTTGCACCCTGTTTAAAGCAGATCGATATCTAGGTTTAACCTTGCCACTGTCAGTGTACATTTTTATCAGAACCTTCTGCTTTCCATCAAATGAATGTTGCTTATCCTAACCCAATAATGTACAGTAGCCTTCAGTAATGTTAGAGTTCAAAGGTTTTTTTGTGCCTTTGTCCACCACAAATCCAGCACAATATGTAAATTTGTTTTATGTTTATTTTTTATGTTAATGAAGTTTTGTTTGGTTCTTTGGAGTCTTTTGGATTTGTTTTATTTTGGTTTGGGCTTATTTTATAAGGTCATAGGTTTAATTTTTACTCAGGTAAAGGTCTATAGGTTCTTAGGCATGGAAGAAACCTTGGGAAGCCTATTAATTCATGGTGCAATTTAGAATTACTTAAATAATGTCTGTGGCCCTGAGCTTAATCTAAAGATACAGTAATATGAAGGATGCATATATGAATGAAATAGTAAACTTGGAAATAATCGTAGGCTCTTTTTACAAACAGAAGTAACTGATTATCTCTTTTATTTGTCCTGAAGGTAATTAACTTAAAAGGTCATTGCATTAA EMBV3_27554 CAAAACCAGTCAGTTAGACAGTGGCTTGAGGAAAACATACTAAGAAAATCACATGTGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14399 TGCCAGCCCTCCTGGGCCTCATTGGGTATCATCTATACAGAAAGGCCAGCAGTCCTAAAA Gene GeneID:506043|FKBP11:NM_001045932:38_cdna Constitutive 1 NULL GeneID:506043 5 GENE FKBP11 MGC134495 FK506 binding protein 11, 19 kDa EMBV3_18067 TCGATCAGACCCATCCCCAGGCACCTCTTCCCATTGCCCGTTGCACTGATCATGAAGCCA Gene BVV0102_119927 + 0 NULL GK000019.2:34717974-34720081 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096470 TCONS_00096471 TCONS_00096469 TCONS_00096472 1 XLOC_057978 Coding TCONS_00096469 XLOC_057978 Coding Coding EPN2 19:34718810-34771507 j TSS71682 4266 1 TCONS_00096469_6 582 9 0.91921587976317 0.000903245160949405 0.000312089132991384 0.00153094111272576 4.78616299116586e-05 0.000873479234993929 0.000222471387810917 0.000113925987995606 0.000500682734532304 0.00100826668018796 5.1178639002319e-05 5.05434721645328e-05 4.24090234637364e-06 2.28930801017275e-05 2.43170305401105e-05 2.96576201617215e-05 0.00780828843724653 0.00601378336506949 0.000959292413792665 0.000378479123089342 0.000585984891078679 0.000463022261867967 0.00276792812821321 0.00289953371693706 0.00294427874088151 0.00155415663413666 0.000559912846086969 0.000780249862183177 0.000547125009150264 0.000687330220095047 0.000454382776885367 XM_005220326.1 EPN2 PREDICTED: Bos taurus epsin 2 (EPN2), transcript variant X2, mRNA. 0.0 7690 100.00 0.99929676511955 NM_148921.3 EPN2 Homo sapiens epsin 2 (EPN2), transcript variant 1, mRNA. 0.0 2199 83.95 0.480075011720581 TCONS_00096469_6 sp|Q8CHU3|EPN2_MOUSE EPN2_MOUSE Epsin-2; 0.0 946 81.86 0.998281786941581 2 coding 0 0 0 0 -0.315431771411138 0.165085248498452 -0.0125559834389549 0.785560230445925 GCAGCCGGCGCGCCCCCTCCCGGCCGCCATGTTGGCTGGTGTGTGGGTGTCAAACCGAGCTGGAAGCGGCTGTGACTCTTCGGGCTCCAGTCGCTCCCGCCTCCTCAGCTCTACTGGAGGCCGCAGCCGCGCACCCGGGTCGGCCCGGAGGAGCGCAGGTCATGGCTTCCAGCTTCTCAGACCTGAGGCTCCAATAGAGGAAATGACCGTCAGGGACCCTGCTCCAGACCTGTTACGGAGACTGAACGTCTGTGGAGCACGAACCTGCCGGAGACGGGGAAGCTTCTCTCTCTGAAAGGATCTGCACTTGTCACAGAACGTAAAGATGACGACCTCATCCATCAGAAGGCAGATGAAAAACATTGTCAACAACTACTCGGAAGCTGAGATAAAAGTGCGGGAAGCCACCTCCAATGACCCATGGGGCCCGTCCAGCTCCCTGATGACGGAGATTGCAGACCTGACCTACAACGTGGTGGCCTTCTCGGAGATCATGAGCATGGTGTGGAAGCGGCTCAACGACCACGGCAAGAACTGGCGGCACGTGTACAAGGCGCTGACGCTGCTTGACTACCTCATCAAGACGGGCTCCGAGCGCGTGGCCCAGCAGTGCCGCGAGAACATCTTTGCTATCCAGACCCTGAAGGACTTCCAGTACGTTGACCGTGACGGCAAGGACCAGGGGGTCAACGTACGTGAGAAGGCCAAGCAGTTGGTGGCCCTGCTGAAGGACGAGGAGCGGCTTAAGGCCGAGCGGGCCCAGGCCCTCAAGACCAAGGAGCGCATGGCCCAGGTGGCCACCGGCATGGGCAGCAACCAGATCACCTTTGGCCGGGGCTCCAGCCAGCCCAACCTGTCCACCAGCTACTCGGAGCAGGAGTACGGCAAGGCCGGGGGGTCGCCGGCTTCCTACCATGGCTCCACTTCCCCACGGGTGTCCTCGGAGCTGGAGCAGGCGAGGCCGCAGACGAGTGGGGAGGAGGAGCTGCAGCTGCAGCTGGCGCTGGCCATGAGCAGAGAGGTGGCCGAGCAGGAAGAGCGCCTTAGGCGGGGCGATGACCTCAGGCTGCAGATGGCCCTGGAGGAGAGCCGCCGAGACACGGTTAAAGTTCCAAAAAAGAAAGAGCACGGCTCCCACCCGCAGCAGACCACGCTGTTGGACCTGATGGACGCCCTGCCCAGCGCGGGCCCTGCTGCCCAGAAGGCGGAGCCCTGGGGCCCGTCCACCTCCGCCAGCCAGACCAACCCCTGGGGCGCGCCGGCAGCCCCGGCCAGCACTGCGGACCCCTGGCCGTCGTTCGGTGCCAAGCCAGCCGCCTCCGTCGACCCATGGGGGGCACCCACTGGAGCCGGCACACACTCTGCTCCCAAGGGCTCGGACCCCTGGGCTGCCCCGCAGCAGCCAGCCCCCAGCGCAGGGAAAGCTGCTGACCCCTGGGCTGCAGCCTCGGCTGCCAAGCCTGTGTCTTCCTCTGGGTCCTTCGATCTCTTCAGTAATCTGAATGGTACAATTAAAGATGACTTCTCTGAATTTGACAACCTCCGAACTTCAAAAAAAGCAGCCAAGGCAGCCTCTCCGCCGACCCAGAACAATGGAACCTCCAGCCCTGATCCCTTTGAGTCTCAGCCCCTGACCGTCGCCTCGAGCAAGCCCAGTGGTGCCCGGAAAACCCCAGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTCAACCTGGACTCACTGGTGACCAGGCCAGCCCCGCCGGCACAGGCCCTCAACCCCTTCCTGGCACCAGGTGCTGCCACAGCCTCGGCCCCTGTCAACCCCTTCCAGGTTAACCAGCCGCAGCCGCTGACGCTGAACCAGCTGCGGGGGAGCCCAGTGCTAGGGGGCAGTGCGTCCTTTGGTCCTAGCCCAGGTGTGGAGCCTGTGGCTGTGGCCTCCATGACCTCCGCGGCCTCCCACCCAGGCCTGGGGGCCAGCAGCTCCTCCCTGCCACCTCTGGGCCCTGCTGCAATGAACATAGTGGGCAGCCTGGGTGTACCCCAGTCGGCAGCTCAGGCCACCGGCACAACCAACCCGTTCCTCCTCTAGTGCCCGGCCGGGACCCGTGCAGAGCATCCATGCCGAGGACGCCGAGCAGGGACTGTCGCTTGTGGAAGGGGTCGGAGAGCAGGGGGATGGGTGTCAGGGCGTCCTGTCCAGCTTCCTGAGCAGAGGGTGTCTCTGTGATCCCGGGCCTCAGTCTGAGGGGTGAGCGGTGGCAGCAGACAAGAGGCATCACACAGCATGTGGGTCCCCGGGCCCAGCCTGGCCACCCCATTGCCTCTGTGGGGATCTGCCAGCTCTCGGGGGCTTGGCCGAGGCGGCGGCCATGTGAAGTGCCAGTCCAGCCTCAGCCCAGGGTCTCTGGGACACTCTCGCCGGGGACCTGGCCCCCACCCCTAGCCCCAGGGACACCCCGGGCAGCCCCAGGCATGGACCGGATGGAGTGCCGGCACCCTCAGACACTGACCTTTTGGGGACGCAGTTGTGCGTGTTTTACTTTTCTTTGACTCGTGCGTGAGTTCAAAGTGAATGCCACCACCGTGGAACAACTCTTGAATTAAATCCACTAGAGAAGCTTTAAACTAACCCGAGCGTAGCCCTGCCACGTGCTCCGTGCTTGTATGCGTTTGCACAGATTTTGTTTAGTACAGTTTCATATTTGAGTTTGCAGAATTATCAAATAGTCTTTTTTTGGCTAATATTTTTATAACGTGGTTCTTATTTAACTGTCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATTAAGATATTGGCAGTGTCATGTTAGTGGTTTAAATTCTCTTATTTATGGTTTTAACTCTGTAAGAAAATTTAAATACGAAGAGACAAAAAAATGCCTTATGGAAAAACTAAAGCAAATTCTTTATAGGAAAAATATGGGAATTTGATTACACATAAAAGATATTAAAAAAAAAAAAGAAAAACCTACAATAGTAACAAAAAATTGTAGCCTCTAGTTGCCTTTTCCTTTAACTCCCTTTTTTGGTAAATTACCAAACTGACTTTCAGCCTTTTTGGCTAGATCTAAGAGAGAGGCTATTTTTCTTACTGATGTACCAACATGAAAGTTAAAGACAAAAGCTAACATATGAATGTTACTCACCAGGTTTTATCAGCTAACTTCTGTGACTGAAGGCATGCACAGTTAACAGGACTCGCGTTTACAGTGGAAACATGGGATGGAACCCTGTCTCTGTGACCTCCCCCTTAGCTCCACCCTCAGGGCAGAGGTGGGGACAGTGCTGGCGGCTTGTCAGGGGGCAGTGGGGCTCTGCTGTGGCTCCTGGGACAGCCCTAGGCTGACGGGCTGCGGCCCAAGCCTGGCTCCCACACACTCACCTGCCCTCCAGACACATGTTGTGATGTAGAAATAACCATCTCTTTCTTTGGAGAGGATCAAAAATCACTCTTATACAGAAAAGATATTAACAAACATGCACTAATCTTACCTCCCTCTCCCCTGCTTCCTTTGTCCCACCCACCACAATTTAAAGAAGTATTAAGTCACAAAGATCAGAAGAGACTCACTCCTCCCCAGAGCAGGGACATTGGCCCCGAGTCCCATGTCTGGACAGCTAGCCTAGTGGGCAAGTCAGTCTCCATTTCCACAGTGGACGTCTTGCCTCCGGCACCAAGGGCAGTTAACACCAGGTCCCTCTGCTTGCAGTGCTGGGCACGGGAGGCTGACAGAGCAGCCTGGAGAGCTCACTCTGCTCCTCCTTTCGGAGGCCACCTCCAGCCCAGAGACTTGGGCTGGACTGTGGACTCCTGAGTCATCAGGAAGGCCGGACCGGCTCTCCTCTCCCAGCGGCCCAGGGGAGAGCGGGCTTGGGGCAAGATGTTCCCCCAGGGAGGGATGGGCTGACGCCTGCACAGGTGGTAGGACCACACTACTGGGTGCTGGGGCCGCTCCTCATCAGTTAGGAGCCCTTCCTGACATGACACAGGCCTCCGAGGCCCAGGCAGCCTCAGCTCCCGCCCTCGATCAGACCCATCCCCAGGCACCTCTTCCCATTGCCCGTTGCACTGATCATGAAGCCACTGGCACTGCCAGAGTGTGGGATGTGTGCCATCAAGCGCCCTCCTGCCCAGGTGCCATGGTGGGGGTGTAACCCAGCCATTCTCAGTCCAGGGGCAGGTGGCTGGTTTTGAACTCGTATTGACTATTGATACTTATTTACTGTATAAATATAATTTATCATTTGTATCATGATG EMBV3_40486 GATGCTTGGGAGTTGCGTAAAGGGATGAACACACTTGTTGGCTATGACCTGGTTCCAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01385 GTTCGAGTCTTTTCCACAGTCTTACGGGTTCCATCCACCAAAGGTGTGCTCAAAGCCTTC Gene GeneID:532238|LOC532238:XM_002695724:380_cdna Constitutive 0 NULL GeneID:532238 19 GENE LOC532238 NULL similar to olfactory receptor, family 1, subfamily A, member 1 EMBV3_09464 CAGGGTTTCACCTTGAATCGTCTAAACTAGAACTCTTGATTCCCTGTCCCTGAGCTCTTC Gene BVT0102_352409 + 1 EMBV3_19987 GK000018.2:51395574-51472709 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16335 TAATACCTAGAACTTGTAACAGAAGAAGGGAATTACACTAAGAAATAGGTTAATGTTTCT Gene GeneID:517541|ADAM17:XM_002691486:380_cdna Constitutive 2 NULL GeneID:517541 11 GENE ADAM17 NULL ADAM metallopeptidase domain 17 EMBV3_04750 GAAATCCCCAAAGCCATGCTCTATTGACCGAAAACGCCCCCTGTGCCAGGATCGCACCTT Gene GeneID:614153|SLC43A1:XM_002693715:419_cdna Constitutive 0 NULL GeneID:614153 15 GENE SLC43A1 NULL solute carrier family 43, member 1 EMBV3_01660 CTTCCACGGGCCCTGTTTGGCTGGTAATGTTTAAGCGAGGTCTTTCCACATCCCATATCC Gene BVV0101_006831 + 0 NULL GK000007.2:16950983-16961022 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34540 GAAGTAATGGACTGGCTTTCTGGTTGGATTTTGGGTATAATGGGCTTATGGCCAGAGCTC Gene GeneID:539650|IGF2BP3:XM_002686716:65_cdna UTR3_Alt 3 NULL GeneID:539650 4 GENE IGF2BP3 NULL insulin-like growth factor 2 mRNA binding protein 3 EMBV3_16886 CCTGGATTACTGGTTTCAGCAACGCATTGTGGTTTTCTATCCTGGCTCTCCAACTGCCAC Gene GeneID:528374|LOC528374:XM_002697457:71_cdna Constitutive 0 NULL GeneID:528374 23 GENE LOC528374 NULL similar to Olfactory receptor 2B6 (Olfactory receptor OR6-4) (Olfactory receptor 6-31) (OR6-31) (Olfactory receptor 5-40) (OR5-40) (Hs6M1-32) EMBV3_19928 TGTGGGCCATACAGGTAGCTCATGCCACCCCATTCCAGCCTTCTCTATCCTCTTTGTCTT Gene GeneID:281951|NT5C2:NM_174405:42_cdna Constitutive 0 NULL GeneID:281951 26 GENE NT5C2 NULL 5'-nucleotidase, cytosolic II EMBV3_27101 AGATTCAGGGAAGTCTACCACGACTGGCCATCTGATCTACAAATGTGGCGGGATCGACAA Gene GeneID:100337180|LOC100337180:XM_002689884:30_cdna Constitutive 0 NULL GeneID:100337180 8 GENE LOC100337180 NULL eukaryotic translation elongation factor 1 alpha 1-like EMBV3_22825 CTCAAGCTCGCTCTGGGCCTCCTTTCTTAGGCCTGAAGCTGGTCTGTAACGGCGGAGAAA Gene BVT0102_299258 + 0 NULL GK000004.2:114602057-114614901 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182927 TCONS_00182928 1 XLOC_111028 Coding TCONS_00182927 XLOC_111028 Coding Coding CHPF2 4:114609500-114615325 j TSS136629 3660 1 TCONS_00182927_2 775 5 0.372424450549451 1.15631932385735e-07 0.000329454091407928 0.000208000109200011 0.000316453313496674 0.000298395786607358 4.9509263801602e-11 4.38504712197321e-05 0.000134384938547829 0.000374618263144457 3.1154978704183e-06 3.87137834214352e-11 6.94415842957342e-11 7.83927370659504e-06 0.000208927510936851 1.96952686397843e-08 4.80332495331673e-05 1.35770694952587e-05 5.48248877029307e-05 6.5371422741174e-05 0.000289929908066113 3.98103294715788e-05 1.37081167961035e-10 5.76440975144238e-05 6.94330392612286e-05 0.000282893353569793 0.000362400708960684 0.000248126835240463 8.84886107163271e-06 6.27750555756283e-06 0 XM_005205787.1 CHPF2 PREDICTED: Bos taurus chondroitin polymerizing factor 2 (CHPF2), 0.0 6469 100.00 0.979781420765027 NM_019015.2 CHPF2 Homo sapiens chondroitin polymerizing factor 2 (CHPF2), transcript 0.0 3301 82.57 0.877049180327869 TCONS_00182927_2 sp|Q9P2E5|CHPF2_HUMAN CHPF2_HUMAN Chondroitin sulfate glucuronyltransferase; 0.0 1311 95.42 0.953548387096774 2 coding 0 0 0 0 -0.00286722236315695 0.980293424348905 0.0203684691610533 0.662292821551936 GCGGAGCGAGCGGCCGGATGCGGTCACCATAGAGACGGGGACTGACAGCGAGCGGAAAAGGAAGGAGTGGGCCGGGCTGTGAGGTGGCAGCGGCTGCGGTGGCGGAGCCGGCGCTTCGGCGGAGCTCTGGGCCCGTGACGCAACCAGTTCTTATTTCTGCTGCAAGAAGAACGGCTCAAGCTCGCTCTGGGCCTCCTTTCTTAGGCCTGAAGCTGGTCTGTAACGGCGGAGAAAGAGACGTGGGGCGGGGAGTTGCCGGGCTTGACACCCGAGCATCCGTCCGCCCGCGCCAGCTTCTTGTAGTCCTCTCGCTTTGCTTCGGGTGCCTGGGGCCTTGGGAAAAGGCAGCCACCGAATCGCTCTTGACAACAGCCGGAGTGGCTTGTCACCGGCCCGGTCTCTTCTTGGAGGATGGTGGGCAGCCTCGGGCTCTCAGCACCGGGGGTTCAGAGAAGAATGCCCTGCCCAGCAGCTCCATCAGCTTTTGTGCTCCTCTGAGGCTGTCCTCCGTGCTGAGTCACCACATCCCTCCACCTCATTAGGTGGAGCAGAACGTCTGTGCGCGGTGCCAGTGGCTCCTGACCGCTCCTGACTGCCAGGGGGAGGGGTTCCTCTGGCCCGAGTGTTTCCTTAACGCGGGTCAAGAGAGTAGGAAGGCCTGGGCTCCATCTCTGTGACTTCCCAGGGGTCGGCAGCCCCTTCAGTGAGTGAGTGAGATGTATGCTCCTCCCAGATGCTCTTTGAGAAAGGCCTGTGGAGTTAGGTTCCTCTAGCTGGGTGCTGGTGTTTTGATGGCCAATGTGCTTTTCCCTAACCCCAGCTTTATCAGTTGCTGCCATCTCTCTGCTTAGATAGTGTTACCAGATGTATGTAGTCCTTCTTTGGGGGTTGGGTTTGGCAGGACTGAGTCTTGCTTCTTTCTCTTCTGGACTAGAGGACCCCACTGTTGGTGGGTGAAATTGATTCTAACATTTACTACCATTTGGACTGAGGGTTAGAACCAGCACCTTGACAGCAGAAGACAAGGCAGGAGTTTCTTGGGGATCCTGGGCCCAGAAGCAAACACAACCTTGTTCTCTTGTTGACCTCACTGGCCCCAGGCTCCCTTGTTGAAAGAGTCTGTTGGTCACTGATTGATCTCTTGAGGCTGTGCCCTCCAGGGCACACACATGGCAGGGCCCACCGCCATGCGGCTGAGCTCAGTGTTGGCTCTGCTGCGACCAGCACTGCCCCTCATCCTAGGGCTGTCTCTGGGGTGCAGCCTGAGCCTCTTGAGGGTGTCCTGGATCCAGGGGGAGGGGGATGATCCCTGCGTAGAGGCTGTGGGGAAAGCCGGAGGGCCACAGAGTCTAGACTCAAGAACTCAGCTTGACCAAAGCGACGAAGACTTCAAACCGCGGATTGTCCCCTACTACAGGGATCCCAACAAGCCCTACAAGAAGGTGCTCAGGACTCGGTACATCCAGACGGAGCTGGGCTCTCGCGAGCGGTTGCTGGTGGCTGTCCTGACCTCCCGGGCCACGCTGTCCACTCTGGCTGTGGCTGTGAACCGTACGGTGGCCCACCACTTCCCCCGGTTGCTCTACTTCACTGGGCAGCGAGGGGCCCGGACCCCAGCAGGGATGCAGGTGGTATCTCACGGGGACGAACGGCCAGCCTGGCTCATGTCTGAGACCCTGCGCCATCTTCACACGCACTTCGGGGCCGACTACGACTGGTTCTTCATCATGCAGGACGACACGTACGTGCAGGCCCCCCGCCTGGCGGCCCTGGCCGGCCACCTCAGCATCAACCAGGACCTGTACCTGGGCCGGGCAGAGGAGTTCATCGGCGCTGGCGAGCAGGCCCGGTACTGCCACGGGGGCTTTGGCTACCTGTTGTCACGGAGCCTCCTGCTTCGGCTGCGGCCACATCTGGATGGCTGCCGTGGAGACATTCTCAGTGCCCGACCTGACGAGTGGCTCGGCCGCTGCCTCATTGACTCTCTGGGCATCGGCTGTGTCTCGCAACACCAGGGGCAGCGGTATCGCTCGTTTGAACTGGCCAAAAATAGGGACCCCGAGACGGAGAGCAGCTTAGCTTTCCTGAGTGCCTTCGCGGTGCACCCTGTCTCCGAGGGAACCCTCATGTACCGCCTCCACAAGCGCTTCAGTGCTCTGGAGCTGGAGCGGGCCTACAGTGAAATAGAACAGCTGCAGGCTCAGATCCGGAACCTGACCGCGCTGACCCCTGAGGGCGAGGCGGGGCTGAGCTGGCCCCTTGGGCTCCCGGCCCCCTTCACGCCGCACTCTCGTTTTGAGGTGCTGGGCTGGGACTACTTCACAGAGCAGCACACCTTCTCCTGCGTGGACGGGGCCCCCAAGTGCCCCCTGCAAGGGGCGAGCAGGGCAGACGTGGGCGACGCTGTGGAGACGGCCCTGGAGCAGCTGAACCGGCGCTACCAGCCCCGCCTGCGCTTCCAGAAGCAGCGGCTGCTCAACGGCTACCGGCGCTTTGACCCAGCACGGGGCATGGAGTACACGCTGGACCTGCTGCTGGAGGCCGTGACGCAGCGGGGGCACCGGCGGGCGCTGGCGCGCAGGGTCAGCCTGCTGCGGCCGCTGAGCCGCGTGGAGATCCTGCCCATGCCCTACGTCACCGAGGCCACGCGCGTGCAGCTGGTGCTGCCACTGCAGGCTGCCGAGGCTGCCGCGGCCCCCACGTTCCTGGAGGCCTTTGCGGCCGGGGTCCTGGAACCCCGAGAGCATGCCTTACTCACCCTGTTGCTGGTCTACGGGCCGCGGGAAGGGGGCCGAGGGGCCCCAGACCCGTTCGTCGGGGTGAAGGCGGCAGCGGCCGAGCTGGAACGACGATACCCCGGGACGAGGCTGGCCTGGCTCGCTGTGCGAGCGGAGGCACCTTCCCAGGTGCGGCTCATGGACGTGGTCTCCAAGAAGCACCCCGTGGACACGCTCTTCTTCCTCGCCACCGTGTGGACCAGGCCGGGGCCCGAGGTCCTTAACCGCTGCCGCATGAACGCCATCTCCGGCTGGCAGGCCTTCTTCCCGGTCCACTTCCAGGAGTTCAACCCCGCCCTGGCACCACAGAGACCGCCCCCAGGGGCTGGCCCCGACCCCCCATCCCCTCCGGGTGCAGACCCTGCCCGGGGGGCTGCTGGAGGGGGCAGGTTTGACCGGCAGGCTTCGGCAGAGGGCTGCTTCTACAACGCGGACTACCTGGCTGCCCGAGCCCGGCTGGCCGCCGACCTGGCAGGCCAGGAAGAGGAGGAAGCCCTGGAGGGGCTGGAGGTGATGGATGTTTTCCTCCGGTTCTCAGGGCTCCACCTTTTCCGGGCCGTGGAGCCAGGGCTGGTGCAGAAGTTCTCCCTACGGGACTGCAGCCCTCGGCTCAGCGAGGAACTCTACCACCGGTGCCGCCTCAGCAACCTGGAGGGGCTGGGGGGCCGCGCGCAGCTGGCCATGGCCCTATTCGAGCAGGAGCAGGCCAACAGCACCTAGAGTGCTCGGGCCCCGCACCTCCACACACAGCCCCTGCCGGCCCCCGCCCGGGGAGGCAAGGTGCACGGACAGATGGGAGAGCTCGCTGCTGTGTTTTTTTTTTTAATAAGAAAATGTTATTAAAAGTGTCTTCTGCCAAACTGTTTTTAGGTCTAGGAAAAAT EMBV3_24744 AATGTCTGTCAGCTTCGCTTTAACTCGGATAAGAAAAAGGGAAGTTAAAAGGCAGCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11275 AGCTGCTGAAGGAGATGACAAACGTTGACAGCCAGAATGAGGGCCTACTAACCATGGAGC Gene GeneID:527504|TSNAXIP1:XM_002694824:706_cdna Constitutive 1 NULL GeneID:527504 18 GENE TSNAXIP1 NULL translin-associated factor X interacting protein 1 EMBV3_04859 TGCTGAAGCAGAAGCGCCACCACCCCAAATTTATGATGCCCAGTTGGAAGAGAGAGAACA Gene GeneID:534125|MAPK9:NM_001046369:34_cdna Constitutive 1 NULL GeneID:534125 7 GENE MAPK9 MGC137545 mitogen-activated protein kinase 9 EMBV3_10495 CGCACGTCTTCGGCTACTTCCTCAACATGCACTGCTCCATCCTCTTCCTCAGCTGCATCT Gene GeneID:515695|GPR20:XM_002692570:247_cdna Constitutive 0 NULL GeneID:515695 14 GENE GPR20 NULL G protein-coupled receptor 20 EMBV3_09157 TACCAGAACCACCTACATTCAGTACGACACCCTCCTGCTCCTAAAACACCTCTCCCACCA Gene BVT0102_182961 + 0 NULL GK000025.2:2488858-2492652 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144287 TCONS_00144288 TCONS_00144289 1 XLOC_088517 Coding TCONS_00144287 XLOC_088517 Coding Coding MMP25 25:2454289-2489261 = TSS108367 2673 1 TCONS_00144287_4 674 12 0.923908381230162 0.00136273084572388 0.00105499788138169 0.00161133446769242 0.000342368135697991 0.000739992764127805 6.76825497819254e-05 0.000512116370921899 0.000234002816463597 0.000842724613566799 0.000202755451559562 0.000653035768503479 0.000129123222466446 0.000324232593094655 0.000292103095029419 0.00138370106193511 0.000242765998820103 3.19719333586898e-28 2.01553976952639e-06 9.05054716396773e-08 2.87395317155109e-27 2.94784775580346e-19 3.60899874352884e-05 1.26975945380831e-180 3.55722476675162e-75 0.00242348407599209 0.000733463659510428 0.00191867953717166 0.000109951099279649 1.45292890684816e-05 1.3495474847481e-05 XM_005196851.1 MMP25 PREDICTED: Bos taurus matrix metallopeptidase 25 (MMP25), 0.0 4307 99.96 0.894126449682005 NM_022468.4 MMP25 Homo sapiens matrix metallopeptidase 25 (MMP25), mRNA. 0.0 1909 84.41 0.651702207257763 TCONS_00144287_4 sp|Q9NPA2|MMP25_HUMAN MMP25_HUMAN Matrix metalloproteinase-25; 0.0 895 85.16 0.79673590504451 3 coding 0 0 0 0 0.279677423222158 0.0532615369569683 0.0097019337094441 0.919018855798455 ATGGCCCCTGTCCTCTCGCCCCCTCGGCTCTCACCCGACGGCGCCGGGCTGCCTCCGAGGTCCCCGCGGCCCCGGATACCCTCTTCCGGGGGCGGCGCCGGGTGCACCACCCGCACAGTCTTCGCCTTCCCCGCCCCGCCCCCGCCCCGCCCCGCCGGGCTAGCCCTCCTGTCCGGACGACAGGCCGTCGGCGCGGACCGGACCTGTGCTCACCCCCCGGAGGCCGTGCCGCAGACCCGGAGCCCGCTTCCTCTCAACCTTCCCGGCCCTCGGCTGGACGCCCCAATCTCCAGGGCGGTGCGGGGCAGGTCCCCGGGAGCCCAGCCGGCCGCCGGGGAGGAGAGCGCCATGCTCCGGCTCCTGGCCTTGCTGCTCCCGCTGCTGCAGCCGCCCGCGCGCGCCCGGGAGCCCTCCGCGCAGGACGTGAGCCTGGGCGTGGACTGGCTGACCCGCTATGGCTACTTGCCGCCCCCTCACCCCGCCCAGGCCCAGCTGCAGAGCCCTGCAAAACTGCGGGATGCGATCAAGGTCATGCAGAGGTTTGCCGGCCTGCCGGAGACAGGCGTCCTGGACCCGCTGACGGTGGCCACGATGCATAAACCCCGCTGCTCGCTGCCCGACGTGCTGGGGGCAGCAGGGCTGGTGAGGCGGCGGCGCCGGTACGCTCTGAGCGGCAGCGTGTGGAAGAAGCGGACACTGACGTGGAGGGTCAACTCCTTCCCCCAGGGCTCTGGGCTGAGCCAGGAGACTGTGCGGACCCTCATGCACCACGCCCTGACCACCTGGGGCGCCGAGTCAGACCTCAGGTTCCAGGAGGTGGGTTCGCAGGGGCCCACGGAGCCTGACATCCTCATCGACTTTGCCCGGGCCTATCACCAGGACAGCTACCCCTTCGATGGGCAGGGGGGCACCCTGGCCCATGCCTTCTTCCCGGGGGAGCACCCTATCTCTGGGGACACGCACTTCGACGATGAGGAGACCTGGACTTTTGGGTCAAAAGATGGCGAGGGGACGGACCTGTTTGCGGTGGCTGTTCATGAGTTCGGCCACGCCCTGGGCCTGGGCCACTCCTCAGCGCCCGACTCCATCATGAGGCCCTTTTACCAGGGCCCAGTGGGCAACCCCGCCGAGTACCGCCTGTCTCAGGACGACCGCGAAGGCCTGCAGCAGCTCTACGGGAGAGCACCCCAAACCCCATATGACAAGCCCACACGGAAGCCCCTGGCTCCTCCTCCCCCGCCCCCTGCCCTGCCCCCGGACAGCACCCCCCAACCCCTCCCTGATCGATGTGATGGCAATTTTGACGCCATCGCCAACATCCGAGGCGAAACTTTCTTCTTCAAAGGCCCCTGGTTCTGGCGCCTCCAGCCCTCGGGACAGCTGGTGTCACCCCGGCCCGCCCGGCTCCACCGCTTCTGGGAGGGGCTGCCAACCCAGGTGAAGGTCATTCAGGCCGCCTACGCCCGTCACCCGGACGGCCGGATCCTCTTATTTAGCGGCCCGCAGTTCTGGTCGTTCCAGGACCGGCTGCTAGAGGGCGCCGCGCGCCCGCTCACCGAGCTGGGGCTGCCCCCCGGGACGGAGGTGGACGCCGTGTTCTCCTGGCCGCTCAACGGGAAGACCTACCTGATCCGGGGGCGGCAGTACTGGCGGTACGACGAGGCGGCGGCGCGCCCGGACCCCGGCTACCCGCGCGACCTGAGCCTCTGGGAGGGCGCACCGTCGGCCCCCGACGATGTCACTGTCAGCAACACAGGTGACACCTACTTCTTCAAGGGCCTCCACTACTGGCGCTTCCCCAAGGGCAGCATCAAAGCCGAGCCAGACTCCCCCCAACCCATGGGTCCCAAGTTCCTGGACTGCCCCGCCCCCACTGTGGGCCCTCGGGCCCCCAGACCCCCCAGAGCGACCCTTAAGGCCGGAGACTGCGACTGTCAGTGCGGAATCAGTCGGGCTGCGGGGCGGCCTTCGGTGCTCCTCCTGCCTCTTCTGTCCCTGCTGGTGGGGGGCCTGGCCTCCCCCTGAAGGGAACCTGCGGCTGCGTGGAAGGGAGCGGATCGCCCACGGGGCCCCTGCGGGTTGTGGCTGTGGGAAGTCTGTCCCAGGGGCTGGGCTCAGCCAGGATGCAGCTGGGGATGCAGGTGGAGCTAAGTCCAGGAGGGCGGAGACACAGGGCCGGCCCTGGCACTGAATGCCCTGAGTGTGGCCTCCTGGGCCTTCCTTCCTCCCCTGACCCTTCCTTCCTCCCCTGCCCCTGGCCATGACCCCGCAGGACTCTCCTTTTCCCGGAACACCTGGCCTTTCCCAGAGCTCAGGGGGCTGAATTCCTGCAGCCCCACCCCGCCTGCCAACAGCAGCTGTCCCAAGTGCTTGGCTCTACAGGACAGCCCCACTCCCCCGTGCTGAGCAGGCTCTCCAGCCTCTGCTCTAACGTTTCTCATCCTGTCCTCCCTCCACGATGTCCCAATCGAAGCACATTGGTGGGGTCCCAAACCCAGCTCTGCGACCACTCCAGAGCATGTGTCCCAAGTCTGGGGTGACATCCGTGGTTCACACGTGGGTGATGCTCCTCAGATGGCCCACCCCTGTGGCCCATCCTTTCTGGTCAGCACGCTGGTACCAGAACCACCCACATTCAGTACGACACCCTCCTGCTCCTAAAACACCTCTCCC EMBV3_27957 CGCCTGGGAGTCGTGAGACGCCGGAATTCGTGTCTCCAGAGCGCTACAGCTATGGCTTGT Variant GeneID:534251|DEDD2:NM_001076017:319_cdna 73^439 1 EMBV3_41988 GeneID:534251 18 GENE DEDD2 MGC140424 death effector domain containing 2 EMBV3_41014 AGCCCCGGCTGGAACGTACTATAGGCTGTGTTTTTAGTTATGTGTGCTGTGAGCTGTCCT Gene BVT0102_334387 + 1 EMBV3_43059 GK000003.2:16088724-16090133 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168713 TCONS_00168716 TCONS_00168712 TCONS_00168720 TCONS_00168717 TCONS_00168718 TCONS_00168710 TCONS_00168715 TCONS_00168719 TCONS_00168711 TCONS_00168714 1 XLOC_103168 Coding TCONS_00168711 XLOC_103168 Coding Coding UBE2Q1 3:16079606-16089727 j TSS126470 2749 1 TCONS_00168711_3 253 13 0.729644268774704 0.0388677474095514 0.0411495854168432 0.0377613211254091 0.0219198534277758 0.0305558255403584 0.0105808570277712 0.0178479214279024 0.0272293715037154 0.0290756448774744 0.00586821355405695 0.00125084901851888 0.00201765937885068 0.00494069879151171 0.00993291234028219 0.00658234288217167 0.0166352075005222 0.00362409683860642 0.0202218535502675 0.0382008700236947 0.0285321560955196 0.0156106436666978 0.00575672568877959 0.00630134357119383 0.00766294534689622 0.0452738180519303 0.0505606039770876 0.0373679521507857 0.00221354140381891 0.00138781221935618 0.00417248278528828 NM_001206320.1 UBE2Q1 Bos taurus ubiquitin-conjugating enzyme E2Q family member 1 (UBE2Q1), mRNA. 0.0 4910 100.00 0.989814477991997 NM_017582.6 UBE2Q1 Homo sapiens ubiquitin-conjugating enzyme E2Q family member 1 (UBE2Q1), mRNA. 0.0 2870 83.09 0.989814477991997 TCONS_00168711_3 sp|Q7Z7E8|UB2Q1_HUMAN UB2Q1_HUMAN Ubiquitin-conjugating enzyme E2 Q1; 0.0 520 100.00 0.99604743083004 1 coding 1 1 1 1 -0.0570853333347993 0.876267127269067 -0.0201053060010662 0.67421455514988 CCAGAGCAGGAAACACGGTCCCGCGCAGGAGTCATACCCTGCGGTGCCCCCCATCTGGTCAGTGGAGTCCGATGACCCTAACTTGGCTGCTGTCTTGGAGAGGCTGGTGGACATAAAGAAAGGGAATACTCTGCTATTGCAGCATCTGAAGAGGATCATCTCCGACCTGTGTAAACTCTATAACCTCCCTCAGCATCCAGATGTGGAGATGCTGGATCAGCCCTTGCCAGCCGAGCAGTGTACACAGGAAGACGTGTCTTCAGAAGATGAAGATGAAGAGATGCCTGAGGACACAGAAGATCTAGATCACTATGAAATGAAAGAGGAAGAGCCAGCTGAGGGCAAGAAATCTGAAGATGACGGCATCGGAAAAGAAAACTTGGCCATACTAGAGAAAATTAAAAAGAACCAGAGGCAAGATTACTTAAATGGTGCGGTGTCTGGCTCGGTGCAGGCTACTGACCGGCTGATGAAGGAGCTCAGGGATATATACCGATCACAGAGTTTCAAAGGTGGAAACTACGCAGTCGAACTCGTGAATGACAGTCTGTATGATTGGAATGTCAAACTCCTCAAAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCATCCTACTTAACTTTTCTTTTAAAGATAACTTTCCCTTTGACCCGCCGTTTGTCAGGGTTGTGTCTCCAGTCCTCTCTGGAGGGTATGTTCTGGGCGGAGGTGCCATCTGCATGGAACTTCTCACCAAGCAGGGCTGGAGCAGTGCCTACTCGATAGAGTCAGTGATCATGCAGATCAGTGCCACACTGGTGAAGGGGAAAGCACGAGTGCAGTTTGGAGCCAACAAATCTCAATACAGCCTGACAAGAGCACAGCAGTCCTACAAGTCCTTGGTGCAGATCCACGAAAAAAATGGCTGGTACACACCCCCGAAGGAAGATGGCTAACCCAGGAGTGCCATCCCCTTCCTCCTTCCCCAGGCACCACTGGACCAATTACCTTTGAATGCTGTATTTGGATCTCACGCTGCCTCTGTGGTTCCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATGGCTATTCTAAACGCTAAGGAAAAAAAAAAAACAAACACACACAGAACTGTTTCAAGTACTCAAGACTGACTTACAGACCAACCAACCACCTGGCTGGAACCCTTGCTAGCAGGCATTCTTATAAAAGAAACTTTCGAGCCTCCTTATATTGCTGGAAACTCAGCTGTGCTCCAGACTAGAGCCTCCTTACCTATGCTATGGATTTTTAATTTATTTTCTCTTATTTCATGTACACTGCTTTTTTTGGTTACAGTGTATGATGGATGTGTATGAAAAAAAAATGTATCTTTGGGAAAACAATTACAGTTTGTTAATTTGAAGACGCTGGTTTTGACTCATCTTTATTTTCCTAGCTTACCCTTCCCCCGTCCCCTGAATTCCTTGAGCAGTGGGGGGAGGGGTACCAGGTTCACTGTGGCTTTGGGAGCCATGAGGGGCTGCACTTCACTGCTGAAGCCAGAGAAAGGTGGAGCTGAAGCACATGCCTGCCACAGCTTGAAGGGCTCTGGAGTGACCAGTCTTGCACCCCTGGGAAGGCAGAGCTCGGCCTGCTAAAGCACAGGCTGAAATGATGACCCTTATTCTTTAAAGCCTTCTAGTCACAGATGTTTTCAAATTTCTAAGAAAAATAACGAGGAGGCCTAAGAGGCTGCTTCACAGAACTACTTTTAAATGAACTGAATAGGGCTGGGGCCACAGTCTCAAGCATGCACGTGGTCCTTCTGATCTCAGCAACAGGCTGTGGAGCTACCATTTGTGCTCACTGGTCCCCCTTCCCAGGAAGTGGCACTGAAGGGCAGTGGTTGGAAGCTCTGTTGCTGCTGCTCTTGTCTGTTGCTTCATTTATGCTTAACAGAGAAGCCAGGCAGAGCTCCGAAGTAAGTTGTTCGGCTTGGAGACTGATTTCTTTTAAGGCACTTTCATAGCATGGGTCCTACTGGAGAGGATTAGCTTTGAGGGGTTTGGTCTGCCTACCTACGGGCCCTGCTCAGGCTCAGAACCGCTGTGGAGGCAGGTCCATGAGCTGACCTGTTGGTGCTGGGTCTGTCCCTGCTGTGTCAGTACAGCTGTGCCGCCTGCCCCTCCTGGTCCGTGAGCTTGCTTGGGGGCAGAGACAGCCTCCTGGAACCTGCCTGCGGACCAGATGGTGACAGACGCCAGAGGCCAGGGGTGGCCAAGTGAGGGTGTGTCTTAGCTCAGACTCGGCACAGCCACCTGAAACCTCTAGGCTGCCAGAGTTCTGTATGCTTTGACACAGCTATTCTAACTTTGGTCACTCCCCGCCACCCCCAATTAAGGGATTTTCATGTCTTGCTGCTTCAGGTGGACGCAGAGTTCACCGGAACCACTCAACGCTGCTCTAACCCTACCACACCCACCTGGTACAGGGTGCTCATTATGCTGAGGTGGAGGTAAAGAGGGCAGGCACCCACAGGAAAACTCATTTCATTGAGCTGAGATCTAGTTCTCAAGGCCTCTGCCTTTTCTCTGAACTTACCACCAGCCCCGGCTGGAACGTACTATAGGCTGTGTTTTTAGTTATGTGTGCTGTGAGCTGTCCTCTGTACGATGTATTTTGTAATGTATTTTTCTCATCTACCAAAGGATGGAACAAATAAAATTATTTAAATA EMBV3_08679 CTTGAACTAATAGTCTCAAAAACTCTTAGCGGACAGTCTGAGAGCACGTATTCCTGTTGT Gene GeneID:538571|RSPRY1:NM_001083734:366_cdna Constitutive 0 NULL GeneID:538571 18 GENE RSPRY1 MGC142965 ring finger and SPRY domain containing 1 EMBV3_01512 GTTGCAAATGTCCCCATCACTGCTAAAGACCCAGTGCTCTGACAGTACAGATTCTAGGAT Gene GeneID:507093|ALDH1A3:XM_002696517:121_cdna Constitutive 3 NULL GeneID:507093 21 GENE ALDH1A3 NULL aldehyde dehydrogenase 1 family, member A3 EMBV3_35591 GATAGCAAGCCAGACTCCACCACTACTGGGTTTCCTCAATGCATAAAAGAGGAGGATGCC Gene GeneID:509107|ATF4:NM_001034342:31_cdna Constitutive 0 NULL GeneID:509107 5 GENE ATF4 MGC126973 MGC179261 activating transcription factor 4 (tax-responsive enhancer element B67) EMBV3_33732 ATAAGAAATGGAGTCAACAGAAACTCGGCCATCATCGGAGGGGTCATTGCCGTGGTCATC Gene GeneID:100337375|LOC100337375:XM_002687137:513_cdna Constitutive 0 NULL GeneID:100337375 4 GENE LOC100337375 NULL KIAA0868 protein-like EMBV3_12840 ACCCACCGGCCGAGGAAGAGCTCTCACAAGGTGCTGATGGACTGGATCAACGCCGAGCTC Variant GeneID:790892|PARVG:NM_001083805:240_cdna 254^318 3 EMBV3_09792 GeneID:790892 5 GENE PARVG MGC148449 parvin, gamma EMBV3_40828 TTGAAGTTTGGAAAGCTGATGTACCTCCAACCAGCAAGGCATGTCCTGTCTACCCAGCCA Gene GeneID:282452|IL12RB2:NM_174645:13_cdna Constitutive 0 NULL GeneID:282452 3 GENE IL12RB2 NULL interleukin 12 receptor, beta 2 EMBV3_06032 ACTATTCCCAAACTCCATATGCCTTCACTTCGTCCTCCCGACTGAAGAGCAATCTACCCC Gene GeneID:783804|CENPN:XM_002698430:398_cdna Constitutive 0 NULL GeneID:783804 26 GENE CENPN NULL centromere protein N EMBV3_17161 GGACGCTGCTGGTCAACGATGTCCTGGCCTCATGCTACGCGGTTCTCGAAAGTCACCAGT Gene GeneID:525833|DHH:XM_002687306:242_cdna Constitutive 0 NULL GeneID:525833 5 GENE DHH NULL desert hedgehog homolog (Drosophila) EMBV3_14692 GAGTTGCCTCTCAGAGATCCCTGGGGAAGCTGCCTTATTCCCTATTCAATAAAATGTGTC Gene GeneID:617512|CCNDBP1:NM_001046604:196_cdna UTR3_Alt 2 NULL GeneID:617512 10 GENE CCNDBP1 MGC133757 cyclin D-type binding-protein 1 EMBV3_17134 GAGAGGGAGATAAATGGTAGAGATGAAAGAGTGGGGATGATTTCCTGCCTGGCCAACCTG Gene GeneID:616242|FEN1:NM_001035113:112_cdna Constitutive 0 NULL GeneID:616242 29 GENE FEN1 MGC129107 flap structure-specific endonuclease 1 EMBV3_32360 GGCCAGGCTCTCTAGTAACCATTTGCGTGAGTTGTTTTATGACAGGAGGAACAGGGAACT Gene BVV0102_025557 - 0 NULL GK000027.2:13454691-13589936 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00157163 1 XLOC_095623 NonCoding TCONS_00157163 XLOC_095623 NonCoding NonCoding - 27:13476077-13476874 - TSS117488 797 2 TCONS_00157163_1 79 1 0 0 0 0 0 0 0 0 0 9.89980056549576e-06 0 0 0 0.000172805102367882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XR_231032.1 LOC101902570 PREDICTED: Bos taurus uncharacterized LOC101902570 (LOC101902570), 2e-33 147 82.00 0.186951066499373 0 noncoding 0 0 0 0 -0.172013171702528 0.160441189231158 -0.0226258593129516 0.739086271878941 CTGAACTCTTCCGGTTGGTGGTGACTTATTAGTTCCCTGTTCCTTACCTTATTAGTTCCCTGTTCCTCCTGTCATAAAACAACTCACGCAAATGGTTACTAGAGAGCCTGGCCAGGGCAGGCGGTTTCAGTCAGCGTGCTTCCCCTAACAATTCCAGCCATGGTTTGGTTTGTCCTGTGTAGACCATAGTTCTCAAGGCTATGAGCAGAATGGATGATGGGGTCAAAGGCAGGGCCTTGGTCTTAGATCGTCCTGTCCTTGGGGGCAGCCAGGGAGAGGAGGGAAGAAGAGCAGGGATGGAGTCAGGGCTGGGGTCTGGGCTGGGGCAGAGCGATGCTGGCAGACGTGAAATCAAGCTCTTCCGATTTTCAAAGCAAAACTGTTCTTGTTTCTTTAAATCACATGCTCTGGCTGAAGACCACTATCGAAAGCAAGGCTAGCTCAGACTTTAGGTCATGTATTAACCCCACTGCATTATTAATATTTCTAACATTTCATAGAGGGGACATTTGGTGACACCCAATGTAAAGGGGAGGTCCCAAAGGAAAGAGAAAGCCAGGAGACATCACAAAAGCCCCAGAGGTGTGGAAGCAGACAGGTAGCTCTGACCATTCTCGCCTTGTATTTGTGTATTTGGTTATTTCAGGTCCTTTTTACTACCAACTGGGGCACAAGGCTCTTTCTCCATCCTTCACCTCTGACTCTGGCAACTTCTCCGCTAACTGCCCCCCAACCCTGTTGCCTTGAAGATAGCTCTGATCCCAGGCTCCAAATGCAGAAGGACAAGTTCCCAAGAG TCONS_00155013 TCONS_00155014 TCONS_00155015 TCONS_00155020 TCONS_00155018 TCONS_00155019 . 3' 21388 TCONS_00155013 TCONS_00155014 TCONS_00155015 TCONS_00155020 TCONS_00155018 TCONS_00155019 . 3' 22184 EMBV3_23025 GCCCCGGGGAGGCCCCTAGCCCACTAAACCCTTCCTAGGTGGTGTCCTGGTGGCACTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15752 ATCCTAAAGAAATGCCCTGCTTCTGTTTGCGCCATGATGTTGATGCCTTGCTCTGGCAGC Gene GeneID:528425|NUDCD1:NM_001076880:23_cdna UTR3_Alt 2 NULL GeneID:528425 14 GENE NUDCD1 MGC140389 NudC domain containing 1 EMBV3_05860 AAAGCTATGCCCGAGGATGCTAAGGGGCAGGATTGGATAGCTTTAGTCAAAGCAGCTGCT Variant GeneID:511990|PHF20L1:NM_001082432:20_cdna 741^818 1 EMBV3_01952 GeneID:511990 14 GENE PHF20L1 MGC148600 PHD finger protein 20-like 1 EMBV3_19459 GAAAGCTGGGAGGAGGCGGCAGACAGCGGGCAGGAAATCCAAATCTCCTCCCAAAGTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08949 CATCCACAGCTTACTCCCTTCTGTACAGAGGCTCCCAGGACAGTGCCAGTACTTGGGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19995 AATGAACAACGGCTTGAATCTGCCCATTGGAACTCAGGGAAGGTCATGGAGGCTGAGTGA Gene BVT0102_032704 + 0 NULL GK000016.2:52373542-52376215 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158561 TCONS_00222850 2 XLOC_097014 XLOC_136157 NonCoding TCONS_00222850 XLOC_136157 NonCoding NonCoding - 7:88947671-88948344 - TSS166848 673 1 TCONS_00222850_1 50 0.846953937592868 1 0 0 0 1.25003428473944e-06 0 0 0 0 0 0 0 7.14308448863649e-05 0 0 0 0 0 0 0 0.000181137860343087 0 0 0 0 0 0 0.00024078188949424 0.000117531277386615 8.56330888242728e-05 7.21340278488425e-06 0 XM_002688782.3 ZNF627 PREDICTED: Bos taurus zinc finger protein 627 (ZNF627), mRNA. 2e-97 360 74.47 0.823179791976226 0 noncoding GTTAAATCTCTGAGACAGTTTTGGGTGAAGTACAAAAGAATAGCTTTATTGCTTTGCCAGGCAAAGGGGGCCACAACAGGCTAATGCCCTCAAAACTGTATGTCTCAACTTGGAGAGGTAGTGAGAAGTTTTAAAGTAATGATTCAAGGAAGGCATGATCAACTCCTGGACATTCTTCTGACTGGTTGGTTGTGAGGTAAGTCCGAGTCAGCATTATCAACCTTCTAGTTCGAACTGGTAAGTGCTTGGGGAAAGCTTTTGGTTGTTAACTGTTAACTTTTCCCAACTGGAGGGGATTTCAGTATCTGCAGAACAGCTCAAAGGTATTTTTGTGTGTATCCCTTGTTGAGGAATCAGGCCTTGCCCCAAGGTTGCTCCTGTTGTTCCTCCTGACTGTTTCTCCCTTGTCTTGCATCCCTTCCCTTCCCTAATTAACAACTGCTTGAATCTGCCCATTGGAACTCAGGGAAGATCATGAAGGCTGAATGAAGCCTATTTCTTGTATTCAAAGAACTGAGGGACACAGAAAAGCTTTTGTGCTCAGGAGCCCAAAAGGGCCTTGCTTGGTGTCAGTAGTGATGCTTCCTTCCTTTTGCAATTCTCTCGAAATGCAAAATTCATATTTGGTGCATGGATAGGTTCAGAGACTCATATAAGTACCACCCTGAAATAT TCONS_00214498 . 5' 46645 TCONS_00214498 . 5' 46645 EMBV3_23727 GTTGTACCTGATACTGTTGACATGACAAAGTACGTGGACCGGCCCTGCCTGGAGCCCAGC Variant GeneID:100138178|UBE2Z:XM_002695907:252_cdna 412^599 4 EMBV3_05368 GeneID:100138178 19 GENE UBE2Z NULL ubiquitin-conjugating enzyme E2Z EMBV3_18864 GCAAATGAATCCAATGCATACAGTAGTACACCATTTAATGGTTATACATGGCATAATTGT Gene GeneID:281880|KCNA4:NM_174371:8_cdna Constitutive 1 NULL GeneID:281880 15 GENE KCNA4 NULL potassium voltage-gated channel, shaker-related subfamily, member 4 EMBV3_08878 CCGGCTGTCACAATGACCCTGGGGGTTTTAAGAAAGTTTAGGTTTCCTTGCGGTTTTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33755 TACATCAACGACCACGAAGACAAAAACGAGGAGACCTTTTGCGTGAAGGTCATCTACCAG Gene GeneID:519551|NPHP4:XM_002694114:442_cdna Constitutive 0 NULL GeneID:519551 16 GENE NPHP4 NULL nephronophthisis 4 EMBV3_11580 TGAACAGTGCAGAGAAGATAACGAAGTTTCTGGAAAACATCCCCCAGGACAGCTCGGACG Gene GeneID:532704|TBC1D7:NM_001015643:116_cdna Constitutive 0 NULL GeneID:532704 23 GENE TBC1D7 MGC139673 TBC1 domain family, member 7 EMBV3_16966 TGAGCTTAGGTCTGTTTTTTCATGTGGAATGCAGATGGGTGCTATCAGAGCCTCTCCCCC Gene GeneID:407129|canx:NM_001105612:13_cdna UTR3_Alt 2 NULL GeneID:407129 7 GENE canx MGC166317 calnexin EMBV3_31606 AGACAGGAACTCAGTGAAACCTGGCCGCCTCGTCTGTCTTGGCTTCTTTTAGCAGAGTGT Gene BVV0102_100075 + 0 NULL GK000020.2:58546814-58563063 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115176 TCONS_00115177 TCONS_00115179 TCONS_00115178 1 XLOC_069465 Coding TCONS_00115178 XLOC_069465 Coding Coding FAM105B 20:58559568-58596045 = TSS85731 6296 1 TCONS_00115178_3 352 0.0314485387547649 7 0.827585261541836 0.000633354928954795 0.000137793002686017 0.000176933968432263 0.000111122040730028 1.85975491868676e-13 6.88994495024235e-10 5.19314630017839e-05 1.78611260717316e-09 0.000107250830870232 5.12815749988293e-12 2.81082504590196e-08 1.77837967309536e-09 2.93832177184421e-09 1.73513693039426e-05 9.5276044808985e-08 0.00290052796332459 1.23565963268812e-09 1.89522747897816e-06 6.63263132987832e-05 4.85708600182144e-05 7.23976077063603e-08 0.000663049990152892 1.4977475786461e-06 0.0010105047636326 0.000408542452032084 0.000135505056022944 3.50098924920036e-08 3.77414467894086e-07 0.000149138045652332 9.10361373841038e-05 XM_005221642.1 FAM105B PREDICTED: Bos taurus family with sequence similarity 105, member B (FAM105B), transcript variant X1, mRNA. 0.0 1.094e+04 100.00 0.963310038119441 NM_138348.4 FAM105B Homo sapiens family with sequence similarity 105, member B (FAM105B), mRNA. 0.0 1400 82.11 0.224587039390089 TCONS_00115178_3 sp|Q96BN8|OTUL_HUMAN F105B_HUMAN Protein FAM105B; 0.0 657 88.64 0.997159090909091 0 coding 0 0 0 0 -0.00922827023194206 0.940094822297936 0.0151131354987333 0.757554010455451 CCCCGACGGGAGGGCCTCCGGATCGCTGGGAGGCGGCCGAAGCCGTGCGGCGCCGCCGCCAGCGGCGGCCCCATGAGTCGGGGGACGATGCCTCAGCCCGAAGCGTGGTCGGGCGCTAGCTGTACGGAGAAGCCGGCATGGGAGGCGGGGGCCGCGGCGCCGGAGGGCGGGAAGTCTGCGGCCGGCGGGCCACCGCGGGTCGCGGTGCAGTGCCCGTCCGAGCACGAGGAGGACATGTATCGTGCGGCGGATGAAATAGAAAAGGAGAAAGAATTACTTATACATGAAAGAGGGTCATCAGAAGCTAGATTAAGTGTAGCTCCTGAAATGGATATCATGGACTACTGCAAAAAAGAATGGAGGGGAAATACGCAAAAAGCAACATGTATGAAAAAGGGCTACGAGGAGGTGTCTCAGAAATTCACCTCCATCAGGCGAGTCCGCGGAGATAACTACTGTGCGCTGAGGGCCACGCTGTTCCAGGCCATGAGTCAGCCGGCGGCGCTGCCCTCCTGGCTGCAGGACCCGGAGCTCACGCTGTTACCAGAAAAGCTCATAAGCAAATACAGCTGGATCAAGCAGTGGAAGCTGGGACTGAAATTTGAGGGGAAGAGCAAGGACCTGGTGGATAAAATTAAGGAGTCCCTCGCTTTACTGAGGAAGAAGTGGGCAAGCCTGGCTGAACTGAGAACTGCAGAAGCAAGGCAGATGGCTTGTGACGAACTGTTCACAAATGAAGAAGAGGAGTACAGCCTCTATGAAGCTGTCAAATTCCTAATGCTGAACAGAGCCATTGAACTCTATGACGACAAGGAGAAGGGAAGGGAAGTGCCGTTTTTCTCTGTGCTTCTCTTTGCTCGGGATACGTCAAGTGACCCTGGTCAGCTGCTGCGGAACCATCTGAACCAGGTGGGGCACACTGGCGGCCTGGAGCAGGTCGAGATGTTCCTCCTGGCCTACGCTGTGCGCCACACCATCCAGGTGTATCGGCTCTCCAAGTATGGCACTGAGGAGTTCGTCACGGTCTACCCCACCGACGCCCCCCGGGACTGGCCAGTGGTGACCCTGATCGCCGAGGACGACCGGCACTACAATGTCCCCGTCCGAGTGTGTGAGGAGACCAGCCTGTGAGCTGCGCTTGGCCCGCCTGGCCACGAGGCTGAGGGGCGCGGGCAGCCCCTCGCGGGGGCCTCGGGCCTGCAGGTCCCTGAGCCCGACCTCTGAGGACGCCTGGGCCCAGTTAGCCTCACCAGACTGGAATGTTCTGGGAACTAGCTTTGGCGAATCACAAGTAACCGCGATTTTTTCCCTCTCATCTGTGATGCAGTACGTTTCCGTGGGAGCCTTCAGAGCACACCTGTTAAAAGGTGCAAACTACACCTCCTCCATAAAACAGACACTTTTATATCAGAGGAGTCGCGTCCTGGACAGAAAGTGTCCAAAGCGCGCTCTCATAGTAAACTGGCTTTCGATTTTTTTTTTTAAAAGATGTTAACTTTTGTTCTGATGGTTACAGCATCTGCGGTGCCCTTTCTCTACATCTATGCAATCGGTTCACGCGGTAGAAGTCGGGGGCAGAGCCTGCCAACAGCCCAGCATCCTCTGCTAGTCTCACCCAGTAATGGTTTAAATCTACATGTTAATTAAAGCTGTTGTAAGCCGAGTGTCTAATAGAAGCATCAACTGGGTCCAGCTGCTTAAAGGCTGGAGAAGGGGCTGCAGGAGAAGCAGCGGCCCCAGGACTCTTGCTCTGCCAGGATGTGCCAGGCGCCTGTGGTCACGGACACCCCCGCTCGGGAGCCTGGTGCGGGGGTGGGTGGTCGGGGGGAGAGCCCCCGGGATCAGGGGCTGTTCCTTCATCTGCAGTTCCACAGATTCACCATCATCTAGTCAGAGTCAAGCTTAGACCCATGTGTGGTTTTAGTGGAAACCAAGGCCAATTGATGAGTTTCTGGAGAGTGCTTCCATCGCCAGGTTCCTGTCCCGCATCTGTTGGAGGGGATGAGTTAGCAGCAGGGAGTCTCTGGTTTTCATGAGTAAGTTTTCAGTACAAGAGCGTGCTTAACACTGTCTGCAGAGGCATGGCCGAGCTGCACCCGCCCTTGGTTGAGTTTGGGATGCCCAGGGTCGGCAGTGTTCTGGCCACTAATGGTGCCCTTGCCTAGTCAGTCACAGGCTAGGGTGGTGCCTGAGAGGCGGGGATAGGCTCTGGCAGACCAGCTGAGCCTTGTCTGCATCAGGGCCCGAATCCCTGTGGCATGTGGACACCTCACTCAGACTATCAGCAGCACCTGGATTGGCTCAGTATTTGTGGAGATGGTGTTACCCTGAAGTACTGAGCTTTATTCTATATAATTATAATCTTTATGTGGTTTAATATAATGTAGTTGATAAGCTATCTAATCTGTTGTCCCTCCCCCCGCCCCGCCCCCAGGGACAGAACTTTTGTGAAAATGTAAGTTTTGCTTTTACTTAAAAATCAAAATTTTCGGTTGAGAAAAAACTCAGAGGACACAGAAGACTATGCAGACTGTTACACGAGTATTCCTCCCATTACCTCATCAGTAATATTCACATTTTGGTAGATACTTAACTCATTAGGGTGTTTGAATTGAATTTTACTCTAGATGGCGTGAATGTGTTGGAGAGGCTTTGTCTTTCACTGTGAAATGCAATGGTGCCTCAAATAATAATAAGAAGGTACCTAGAAGCCAAATGAAAATGACGACTTCCTGTTGGCTTGGATGCTTCATTTTATGTTACATGATTTTCATGCAGCTTATAAAAGGAAATGCCTACCAGTTCATTCTTGAACATGTTTAAAAGCACAACTTCAAACACTTCAGTTGTACAAGGCAGTTGGTGTCTGTGTCCATCAAACTGCTGGCAGATCGCCTCTGTTGAGTTTAATGATACTCATGATCTCTGCATTTTTGAGAATGTTCTAGTCTTAGTGAACTTGAACTGGGCTTCTGGGTAGCTCGATTACATCTCATACTTTTTTCTTGTTCCTGTGTATGATATTGTTAGAGTGTGTGCAAAAATTGTGGTCTTAACTACCCCATTGATAAAAACTCAAAAATGTGCATTTAAGTTGCTTTCTGACCCAAGGCCATATTAGACTCTCAGACTGTCATGCAGGTTTAGAGGGATCATAGCATCAGAGAAGAAAAGCTTTCAAAGAAACAATACTTTAGGAAATGTAGATGATTGGCGAACTTTAAAAAAAAATTTTTTTGTTGCTACGTGCAACTATAGTTACCCAGAGCTTTAATTCCATTTTTCATTCTTGGTCTTGGCCTGGTTGGGTGATATCAGTAGAATTGAAATTGAGTTGAGACCAAAATGGATTCAGGAGGATAAATTTACTTAGAGGGGATCTCTAAAATGGTATGAGTGTTTCCAAAAAAGGAAGGTAGTGGGACCTACACTTTGCTTACTTTCTATCCCAGGATTTATTGCAAGAGTTCAGTCATTTTGGAGCCCTCTGGTCTTATCAGAAAGAAGATACCTGCCTTGAACAGGTGTGACTTATACCTTTGAGCTCATTTAAAGTGCATTAAACCTAAATAACAAGTTCCATGGAATTACCTCTCGGCGTGTGGGATTTGATCTGAAATGTCAGTTCCTCTTCCTTGGAGTTCAGCAAATCTGAAAACACCTTAAAGGCACAGAACAGGATTGTCCCTGCTCTCTACATAGAGCCGTTCACACTTCCCATTATACCGTTGTATGTTCCATTAACGTCTGACGTTTTCTTTGATTGTGGAAACAGAGATCCGCTTGGTATTGTTTCATTATTTTTCCCTCCAGTTCTAGGGCTTGTCAAGTAAAATCTCAGACCGCTTGAATCTCACCCCTGTGTCAGGAAAAACACCTTTGTTGGTTTTTGTGCGCTTGTTTTTTGCTTTGCTTTTTAGGAGGCTATGTTACCCTTCCGCCCTCTTCACCTCAGGGTGCTCGTTTACCTGAGAGTGTGTGGCCTCCTTTTTGAAGGGCTTCCAGGTGTTAACTGAGGTGCTGTCTCACCTCTGATGATCCAGCTTCCTTACATTGCAGCATAGATGTCAAACGTACCTCCTGGTTTTGTCTCCTTTGTGGTGTTAAAGTTTGATCATGTTCCTGTCTCTCTTTCTAAAGCAACACTTTGCAGGTACTCCCCCTTTGAAAGCCAGAAAGTTATTTTCAGAAATACAAACCTCCAGGGAATTGTACTTGTGCTCATACACAAAAATACATGGATGCCTTTTCTTAAATGATCTGTATCTAGTTAAAAACCAATAAGAATGTGTTTGGAGTGAATCTGAAATGTGTGTGAAAGATACAGGAGTCCCCACATAGTTGAGCAAAGTCAGGGCACAATATCAAGTAATTTTACCAACTTTCCAGAGACGTTTCAGTTTTGCTTAGATAACAAATCACTGGCCACAGGCGTTAGTTTTTGTGAAACCCCCCCAGTCAGTAATGTGTTAAAAGGCCCAAGAACAGTAAGGAGTGAACTGAAGAGTGACGAACTGATTTTAGATGAAAAAATGCCTTTGAAAAACAAAACGGATGCCTAACAGACCTCCTTAGCGTAAGTTAATAAAAGGATAAAAATCTGAACCAGCGCACACCACTTCTGTGCCTGGATTCTGCAGATGCCTTTTTCTAAAGTTGAAGCCCCCTGTGTAACAGAAGTAGACTGCCGAATGCTGAACTTTTAGAAAACCTTCTTGGGGGTCTCTTCTCAGGGCCTGGAGAGAGCAGGAAGCCAGTGCTGAATCGAGCAGTGAAGTGAGACCATGGGCAGCTGATGATCAATACTTGTAACTGATCCAGGGAATAACTTGGAGCCACGAAAAGCACAAAACTAAACTGGTTTGCCTGCCCCCAGCCCTGGTGGCTGTAAGGGTAGGGTAGGCTTGGCCACGACCAGAATGGGCGGGGTGATGCCTGCTCGCTGGTCTGCACTCAAATCACGACGTTCTGTGTGAGGTCACAGAGCCTGAGACCCTACAAGTTTGGGAGGGTGGAGGTGAGCTGTCCCTTTTGCCTTTTTTTTCCCCTCATGCTAAATTGAAATTTATTACTGGAGATAGTGGAGGATGTTAGTAGGTATCATTAAACTCTCCAGAGTGGTCATAAAGTCTGAAGATAATTATATTGAAATGTGTTATCAGCAAACCACTTGCTACGTTTATCTCTGTTTCCAGGGGTCTTCCCTGGTGACTCAGTGGTAAAGAGTCTATCTGCAATGGAGGAGATGCAGGTTCAATCCCTGGGGTTCAGAAAGATTCCCTGGAGAAGGAAATGGCCACCTTCTTGCCTGGAAAATTCAGTGGACAGAGGAGTCTGTCGGGCTACAGTCCATAGGGGTTGCAAAGCGTCAGCACACGACTTAGTGACTGAGCAAGGCGAGGCCGTTGACCTCATGGCCATCTGTATATTTCCATAACTTGAGTGCTCATTAATAGCCAGGGCTTGTTAATAGAACATTGATGAGAGCTTTGTCTCATTCTTGTTGATTTTTCGGGTGTAGGTGTGGGTCAGGGGTGAAATTGCCAAAATGCAGGTGATCCAGGGAAAGGATCTGGGATTCTAGATGAAACCAGTCTTGGCAGTCTTTTTCCCAGTAACCAGGGGTGGTTGAGTTCAGTTCTGAACTTCAAAATAATTTTTTTTTTGTACTCAAGACCTGTTCTATAATGAAAAAATGCCTTGACTTGTCTCACAAATGGTGCTAAACTATGGTACTCCTTATAGGAGCCAGGGCAGTCTGTGGGTTGGTTACTTCTGAGTATTTCAATGTGGGAAAAAAGCCAAAGTGAATGTATGTAGTGAGCTCCCTTCTCGCTTCCATTGTCTGTAAACATGTTTTGGTCTCACAGCCTCTGACTTTGTGTTATGAATTTGGAGGGGATACCGACCCCTTGTCTGTCCGTAGCGGCGGTTTTCCTTCCCCATCGGCCAGGCTGCCTAGGGAAGGCAGACAGGAACGCAGTGAAACCTGGCCGCCTCGTCTGTCTTGGCTTGTTTTAGCAGAGTGTCCAGTTTGCACTCTTAAGATGTCAGCGTTTGTCAAAAACCTCATCTGCTCTGAGAACCGTGCCCCTGAGGCTCCCATCGGCCTGGGACCATGGTCCCACCTGCCTCCAAGGCGGAGGTTGCCTCATTGACAACGTTGAATCCTCATCTTTACTGTCAGAGGCCAAGCCAACTCGGGTTTTGCTGTCGATCTCCTGTAGCAAGCCTGGCCATGAAGGACTGTAAAAACAAATAACTAAAAATAAAAACTCAGAGAATGAAAACTTGGA EMBV3_17414 CCAGAAGTCTCCAGTTATGGAACCTGAGTTATTTCACACTCTTCATTATGGACCCCTAAC Gene GeneID:517248|IMPACT:NM_001102501:22_cdna UTR3_Alt 3 NULL GeneID:517248 24 GENE IMPACT MGC152516 Impact homolog (mouse) EMBV3_42034 AGACAGATCCAGAGGCCACTCAGGCAACTGAGGCTGAAAACAGACCCCCGTTCTGTCTCC Gene BVV0102_325235 - 1 EMBV3_02472 GK000010.2:87178084-87186241 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38526 GCTGAAGTATAAATTAGGTACCGCCCAGCATAATTGACGGATGATGATTGTGAGTGCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01069 GGTCCACCTGGAAAAAGAAATCGAGACCTACTGCCGCCTGATAGATGGAGACAGAAACTC Gene GeneID:788909|KRT10:NM_001080375:258_cdna Constitutive 0 NULL GeneID:788909 19 GENE KRT10 KRT28 MGC139876 keratin 10 (epidermolytic hyperkeratosis; keratosis palmaris et plantaris) EMBV3_43610 CAGGCAGCCATGAACAGTTGCTGTTTGGTTTTAAATAGCATCTTTCACATCCATGCTGAA Gene GeneID:508904|DPH5:NM_001076821:65_cdna Constitutive 3 NULL GeneID:508904 3 GENE DPH5 CGI-30 DPH5 homolog (S. cerevisiae) EMBV3_28733 AAGGCGCTGGAACACCCAGCAGGACTCTACCTTGGAGAGACCCAAGACCCTGGAGTTTCT Gene GeneID:538340|LOC538340:XM_002690991:281_cdna Constitutive 0 NULL GeneID:538340 10 GENE LOC538340 NULL similar to mitogen-activated protein kinase kinase kinase 9 EMBV3_38608 TCTAGGCTCGTGTCCTTTATGTAATTGTGCAGGAAAGTATTTATGAAGGCATCCTGGGCC Gene BVT0101_007844 + 0 NULL GK000030.2:4358987-4379759 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243629 TCONS_00243627 2 XLOC_150215 XLOC_150214 Coding TCONS_00243629 XLOC_150215 NonCoding NonCoding CT47B1 X:4354307-4378221 o TSS183254 1353 1 TCONS_00243629_5 87 0.0665188470066519 2 0.943503533642788 9.49190457328392e-05 0.000220894859039446 0.000181165797531754 6.00968669629226e-05 0.000231745035309143 4.65307719527264e-05 0.000214741265805926 0.000385977879605779 0.000194656729899003 2.53417829381227e-06 0 0 3.91619391094095e-05 0.00010467538620936 7.25232342221427e-06 0 0 0 4.75896229803137e-05 5.09546729703471e-05 4.42288230508791e-05 1.09692076752702e-06 0 0 0.000145124891605976 7.68086962890216e-05 0.000179065442030626 1.02937991538506e-05 8.97008544239431e-07 0 XM_002699503.2 LOC100300684 PREDICTED: Bos taurus cancer/testis antigen 47B-like (LOC100300684), mRNA. 0.0 899 99.41 0.373244641537324 NM_001017928.2 CCDC58 Homo sapiens coiled-coil domain containing 58 (CCDC58), mRNA. 1e-77 295 74.64 0.331855136733186 0 noncoding 0 0 0 0 -0.404611748840493 0.141894258306438 -0.0257299799619453 0.728099665530826 CACTCATATTTTCATTGAATGCCACCTATACAGATGATAAAACTGAGGCCTAGAAATGATAAGCAACTGTTACAAGATCACTTAGGGCAGCAAATGTTAAACCAACTCAGACCTCAGATGGGGATTCTGCCTCTTTTTTGCTGTCTTTATAATGAGAATTTTGGATTAGAGATTACTGACATTGCCTTCCAAATTTAAACCAATGATTTACAGCAACACCATGCTCCATTCACGAGGTGAGACAGAGGAAAAATGCAAACACTGAAATTCGGTTGGAACTGAACTGAATGAAAGGGGAAAAAATCCCCTCTTTACAATTATGAGACTTATTAGTATTTTTCCTAAATGTAACATCCAGATGTAATCGGCTATGTCTTTTTCAAAAAATATTTTTAGTGCTACAAAACTTTTTTTACAGAATGACTGTAAAAGCAGTTAATTTCTGTATAATTTTCAAAATTACACTTGGGGTCTGGACTAAGTGGATCTTGAGATCAATAAAAAGTCTGGGACTGTTGCCTCTGAAACAGCCTAGGAAGGTGGCCCTTTTAACATCTGTCATGCTTAGCACTTAGGAGATGACCTGATCCTTTAAAGAAACCTCTCTTTTATTATTCAGTCTTCAAAGCGTTAAGTGAATTTGTCTGGGTTCATTATACACCTTCTAGCTCCTAACTTCTCCAACACTTCTCAACAATCAGTTCTGACTACATTCATTTCAATTTGTCTACTCTTTTCCAACTGTTTTTCACTAAGTTAAATTGTCCAAATTCTCTTTCTCTTCTTCGGAGGTTTTTAGTACTGCTAACATCTGAGATATACAACATTTTTATGACCCTGTCTCTATTCACATGAGCCATTACCAGGTGGAAATTCCCAGGTGGGAAATTTCTCTCAGTTCACATGGCCCAGGATGCCTTCATAAATACTTTCCTGCACAATTACATAAAGGACACGAGCCTAGAAGACCTCCAGACATGTCAGAACCCTAACGCGTCAAAGAACAAGTAGGCAATTGTGAGCAATTTGACAACCAAGGGCCTTGGCCGTTCATTGGACACAGAGCACGTCAATCCTTGTTTGTCAGCAAATGAGCCCAAAGCTCGTGACGAGGGGTCACATGCCACCGTTAACTGTTCCGGCCCCGCCCCTCGACTGTGGCCTGGCTCCACTGCCTGAGGCCCGACTTCCGTCGGACGCTTCCGCCATTGGCCGCCTACCCTCCCGGTCGTGGGGCCTCCTCTGTGGTCCCTTCCGTGACTGCCTCGGTCCATCTCACTTCCCTCAGCCTCCTCTCAGGGCAGCCACTTCGGGTGCCACCACCTGCGCCATTGCCATCGTCACCCGCCCGGC TCONS_00243635 TCONS_00243636 s 5' 693 TCONS_00243630 s 5' 1160 EMBV3_05411 GGGACATGTTTCAGGAGGAGCCTTTCTGAACTCAGTACCTGTCGAGATCGTTTTCGTCAC Gene BVV0102_053596 + 0 NULL GK000019.2:58642198-58647285 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098033 TCONS_00098035 TCONS_00098036 TCONS_00098034 TCONS_00098037 1 XLOC_058411 Coding TCONS_00098033 XLOC_058411 NonCoding Coding C19H17orf80 19:58646008-58653656 j TSS72511 3525 3 TCONS_00098033_5 115 0.089645390070922 4 0.539557996599974 0 0 4.50165994515842e-05 1.02782987874177e-08 0 2.3932049162689e-130 4.20741302908001e-05 1.0301508475404e-05 4.61894621084011e-66 5.51898223502067e-80 4.81757021902359e-44 1.26947884642369e-27 6.2275558796533e-86 2.36327578110894e-66 2.12964357609874e-119 0.000523473243458874 4.50951353726191e-174 1.18735097033207e-90 1.33011026391629e-18 3.80161791910212e-05 2.23912250085172e-05 1.91632095848298e-25 6.34942622573149e-78 0.00066681539870614 0 0 0 8.93823228434367e-10 1.46069477070536e-44 3.65067309024126e-12 XR_228814.1 C19H17orf80 PREDICTED: Bos taurus chromosome 19 open reading frame, human C17orf80 (C19H17orf80), transcript variant X5, misc_RNA. 0.0 4727 100.00 0.743262411347518 XM_005257488.1 C17orf80 PREDICTED: Homo sapiens chromosome 17 open reading frame 80 (C17orf80), transcript variant X2, mRNA. 1e-50 206 68.69 0.152340425531915 0 noncoding 0 0 0 0 -0.146775586878842 0.265854391618933 0.072712765410623 0.161938157358157 GTTTGCCTCAGTTACCTTAAGTGATCTTATGCCAGTCCTGGGAGATGGCTCTTATCCCCTTTTACAGACGAGGAGACTGAGTTTCAGAGAAGCCTTGCCCTGGGGACCTCGGGCACCGAGTGCTGGGGAAGAGGACGGATTTAGATGAGCTGTCACAGTGACTTCTGTTTGGAACCCTAGTTCCTTGGTTGGAAAGAAGCACGACGGCGGTAAGGAGCTTGGAAGCCCCGGCCAGCTCCTCTCTCAGGAGGCTCCTGGGAGCTGTCCACACAGGCTGGATCCGGTGCCGCACCAGCGTGAGGAGCGGAGTCGGTGGCCTCACCTTGCTCTTCACCGGCTGCTTCGTCCTCTGCTGCAGCTGGAGCTTCAAGCATCTGAAGCTGCAGCGCTGGCGTCATCAGCGCTGACCTGGACGCCACGGAAAGCTCTGCGCTCCGAGGCGAGGACGGTGGAGACACTGCAGAGCACGCTTAAGAGCGGAAACTGCACGGCGGGCAGGGCGGGGCGGAGAGAATAAAATGACTGGAACCCAGCCATTCTGGAGGAAGCCAGGTGTTTTTTTTTCAAATGTGGACAGGTCTGGTTCTCTCTGGATATTTCTTTTGGCATGTTCTCAGAAGTGACTGAAAGTTTTGGAGAAAAACTTGAGGTTGTTTAATCATAAAGGCGGATGTTATTCAAGGAGACAGGGAGATGACAGGAGTTCATTGTTAAAAATTTAAAATAGCTGTTTCCTAATTCTCGGTAAAAATAATCCCAATTCTAAATCATTTTCTCCCCAAAACTGTTGTCTGTATCTTGGCATCATGCTGTTCATCCCTGCCGGATACTGGTTCAGAAGAGCATCTGAAGTGGCTGGAAGTCAGCTCATGTCAGACCCTTCCCCTTGGGGGTGGGTGGGCTCCTCTGGGCCCTTGACCAGCTCTCGGCAGCTGTGAGGAACAAGCAGAGGGTGGGTTCAGAGTTGCAGGTGAGCCTCTGAAAAATCCTTGGCAAGTGATTTTTTTTTTCTTTTAAGCTGATTAAAACAGCACACTCCAAAGAATGTTAAATCATCTTTTCCACATCTGCAGTGAGAATAGCAGTGAGCATAGCAGTGAGCAAGTGGATTCTGCTTCTCATCTCTTGATGGAAGTGTTTCAGAATCCTACCCCTACACCCCCCAAGAAGCTGAGTGAAATATTCACATATTCCTCCCACTTCGTTAGGGCTGCATAAGAAGGGTGGGTTTTGGGGTTTCTTCCCTGGTCAAAATATTCCACGTTGTTGTAGTTTTATGACTTCTGCTTTGGACCCTAGACGATAACTTGGATAGACAAAGGCTTCGTGGAAATCCAGTGTAGATCGCACAGATGGATCAGGTCTTCCGATCCTTCTCTAGTATCAAGGGTTGACTATGTCTTGGATACAGATGTGCCCCTGTCGGACCAGTGAGTCTGTCTGGGTCTTAGCTTTGCTTGTGATCCTCAGGCCAGAACACGCGTTCAGCCCCTTTTGCCCCCGCTCCTCCAGAACTACGAGAAAGCGGGTGTGCTGTCATAAAGCCAGCTCTCACGCATCTGCATCTCTCTCCCCGCTCTCTTCCGAGAACTCGATGCTGGCTTCATCTCCCCTTTCTGTTCTTCAGTCCCCTGCCTCCCCACCCTCTCTAATTGTCCCTAGTGGGAGTATAATTCTGCATCAAATTCTCCTAGTTAAGGAGAAGGTGTATTGGAATTGTCCACAAGGAAAAATTCACAGTTGAGGAAGAGTATGGTAGAGGTATAACTAAAATAGAGGTAGGTAGTTCAGTGCGACTGAGAATGTCACCGGAACCCCCTCTGGAAGGGCTCTGCGGCCTTTCTTTGTAAACGCCCCAGAAGAGACGCGTGGGGAGGAGGCCCTCCCGCAGCTCCCCCTGCCTCACTCTGGGTCAGAGCTGCTCGGTGCAGAGGTGGGTGGGAACGACCTCTGCGTGGGTCCTCTCCCGCCCCAGCAGGGTCCGCAGACCACGAGAACCCACAGGCACGAGCCGGCGTGGGCCTGTCCGTACGTGAGGTCTCGGGGACACAGCCCGGGTTGTTGGTCAGGTGCTGGCTGTGGCTGCAGCGCTAGCTGAGCCGTCACGGCAGAGACCGTAGAGCCTGCAGAGTTGAACGTGGTTCCGCTATGACCCTCCACAGAAAGCCTGCCGACCCCTGCCCTGGGCCAGCAGGACCTCACAGGCTCCTCCGTCGGAGGGATGAAGACGACCGGGGGTCCACTCTAAAGCGTTCAGGGCTGGGACATGTTTCAGGAGGAGCCTTTCTGAACTCAGTACCTGTCGAGATCGTTTTCGTCACTACCGTAAAGAAACCAGCACGTTGGTGGGAGCTCCCCAGGGTGAGCAGCAGCGCTTAGATTTCACTTCCAGAGCGGCTGCATGACTTCCCCACCACAGCTTCCGGCCATGTGCCAGGAAACGCAGCCTGAAAATTCACCTCCCCTCCCCCGCTGCAGCTGAGGTCATGGTGACGCCCAGGCTCCCCCGTCCTGGACTCCAGGGCAGGTCCTGTCACCCGCCCGCGTGCTGTACCACCTGACCGCCCTGCTGTAATTCGCGTGGCCAGGGAAACGGGGGGTGTCCCTGCTGTGCACTTGAGATTAATCCTGCCTTTACTAGAGAATATGTTTTTCTGTATATATAAAAATTCTCAGCTATTGCAAATAAAGTCATTTTGTTGTATCATCAGTGGAGTGTTTTTTGGGAAGCCCTCTCTGCTGTCACTACTGTTATCATGCCTTCCTTTCCTGGTTTACCTAAGTTACCTGGTTACCTGGAACTTACTTGTAACTTACCTGCTAACTTGCTTACTTTTACCTGGTAACCCTAAGTTACTTTTAATACCTGCTTCTCCCCGACACAGTGTTGCTCCTACATATCACTATTACCACTCTCCATAACAAAAATATTCCTAAAAAATGTTCCTCTGTTCTGGTTACGTGCCTCTGCTGGACACTCACCTGTGAGATAAGTAGCACGTCCGTCCTTGGACAAGTGATCTAACTTAACTGGAGCCTCCTTGTTCCAGGCCGTAAAACGGGGACAGGTATACCTACTCTGCAGAGACTGGTAAGATGAGGAGTCTCAACGTAGTAGGAACGAACAATACCACCTTTGCTGACAACTCCTGTGGCCTCGTCCTGCGTCCACATCCTGACTGGAATCCAGCAAGAGGCCCCACCTCCATCCAGCCAAACTTCAGCTACCACCTGGGCGCTTGCTTTCGTCAGCCAAGCACCATTCTTCACCTGCCGCCTGCTCACAACCACCCAGTGAGGCCAAAGCGGCCGTCACATTCCCCCGGAGAGAGGGTGCAGGCTTGAGAAGGTTGGTGGTCTGGCTGCGTGCCATGTGTCACATACCCGCCCAGGGAGGAGCTGTCTGCTGGGCCAGCGTGCTCTTGGATGGTCTTGCCCCCCGCCCTCTCCCCTTCCACCAAGCGGGATAAGGCCGCTGCCTGTGTCTGCAAGACCGGCGGGCCTGGTCCCTCCACACCATCCCTC EMBV3_16630 GGCAGAAGAGATCCTACCAAGATCGCTAAGCACGTAGACTTTAGACTTGTTGAAATGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11361 ACTAAACTGAACCTGCAAGGGAGAGGACGTCGCGTTGTAGCCTCCAGGTGGCGCCTTTCA Gene BVV0102_246227 + 0 NULL GK000018.2:53841048-53852956 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12513 AAGGAGACTGTTTACGACCCTTCTCTGCCCACCTCACACCAGAGTAGCTTGTCCTGGAAA Gene GeneID:512474|DISP2:XM_002690790:225_cdna Constitutive 0 NULL GeneID:512474 10 GENE DISP2 NULL dispatched homolog 2 (Drosophila) EMBV3_41932 AGACATGGCAGGGATTTGTATCGCTGTGCCCGGGTCAGTTCCTGGGGAGATCTTTTACCT Gene GeneID:514880|METT11D1:NM_001038542:55_cdna Constitutive 0 NULL GeneID:514880 10 GENE METT11D1 MGC134140 methyltransferase 11 domain containing 1 EMBV3_25758 CACGCACAAGCACAGCCCGTTGGGTAATGTAGTTTCTGTCTTGCATCTCACCCTTCCCAT Gene BVT0101_045719 + 0 NULL GK000018.2:64878301-64891228 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28674 TTGCTGAACTGAGGTAGGCTCCGGAAATGACATGTGCAAAGACTCAGGTTTTCCAAAGGG Gene BVT0102_005432 + 1 EMBV3_08782 GK000012.2:30558211-30586733 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035039 TCONS_00035042 TCONS_00035045 TCONS_00035041 TCONS_00035046 TCONS_00035043 TCONS_00035044 TCONS_00035038 1 XLOC_020815 Coding TCONS_00035043 XLOC_020815 Coding Coding KATNAL1 12:30503872-30562730 j TSS25747 6233 1 TCONS_00035043_3 490 11 0.894286151179979 0.000516334620022405 0.000439296329533022 0.000589886542013245 0.000393853682876374 0.00132286197774882 0.000413112290535873 0.00055899908329621 0.000792788486075266 0.000765456041783443 4.49236564862587e-05 3.41720013382216e-09 3.05443746273272e-09 1.15164126532446e-05 6.29158440595443e-12 0.000303821368709535 0.000406528047817165 1.43737153773155e-08 3.1288256178964e-08 0.000844295844584396 0.00123875502227839 2.86687216770629e-05 5.2678194942546e-05 1.14521735393592e-08 0.000552918778755883 0.00111755550670747 0.000808610776778139 0.000657750635349442 9.71071326002452e-09 2.53803973374408e-12 5.14265925023505e-09 XM_005213666.1 KATNAL1 PREDICTED: Bos taurus katanin p60 subunit A-like 1 (KATNAL1), 0.0 1.067e+04 100.00 0.948660356168779 NM_001014380.2 KATNAL1 Homo sapiens katanin p60 subunit A-like 1 (KATNAL1), transcript 0.0 2426 83.17 0.374137654420022 TCONS_00035043_3 sp|Q9BW62|KATL1_HUMAN KATL1_HUMAN Katanin p60 ATPase-containing subunit A-like 1; 0.0 957 97.14 0.997959183673469 3 coding 0 0 0 0 -0.107518204880966 0.549539452838464 -0.0488323207413693 0.491773324005089 ACTACAAAGCCCGGCGGCCCCGACAGCTGAGAAAGACCGATAAACTTTGAGCCGGCCAGGGGAAACAGGGAGACTCTGTCTGTGGTGAGGGGATTCTGGGGTGGTCGCTGAATGGGGTTCTGAGAGCTAAAGGGGAAGTGGAGATCTCTGAAGGATGAATTTGGCTGAGATTTGTGACAATGCAAAGAAAGGAAGAGAATATGCACTTCTTGGAAATTATGACTCATCCATGGTATATTACCAGGGGGTGATCCAGCAGATTCAGAGACATTGCCAGTCAGTCAGAGACCCAGCGGTCAAAGGCAGATGGCAGCAGGTTCGGCAGGAATTATTGGAAGAATATGAACAAGTTAAAAGTATTGTCAGTACTTTGGAAAGTTTTAAAATCGACAGGCCCCCAGATTTCCCTGTGTCCTGTCAAGATGAACCGTTTAGAGATCCTGCCGTGTGGCCGCCCCCCGTACCTGCAGAACACAAAGCTCCACCTCAGATAAGGCGTCCCAATCGAGAAGTAAGACCTCTGAGGAAAGAGATGCCAGGAGGCGGCGCCCGGGGACCTGTAGGCCGAGCACATCCCATATCTAAGAGCGAGAAGCCCTCCACCAGCAGGGACAAGGACTGCAGAGCCAGAGGGAGAGATGACAAGGGAAGGAAAAATATGCAAGATGGTACAAGTGATGGTGAAATTCCAAAATTTGATGGTGCTGCATATGATAAGGACCTGGTGGAAGCCCTTGAGAGAGACATCGTCTCCAGGAACCCAAGTGTTCACTGGGATGACATAGCAGATCTGGAAGAAGCTAAGAAGTTGCTGAGAGAAGCTGTCGTCCTTCCCATGTGGATGCCTGACTTTTTCAAAGGGATTAGAAGGCCATGGAAGGGAGTGCTGATGGTTGGGCCCCCAGGCACTGGAAAGACCATGCTGGCTAAAGCCGTGGCCACCGAGTGCGGCACAACCTTCTTTAATGTCTCCTCTTCCACACTGACGTCTAAATATAGAGGCGAATCTGAGAAGTTGGTTCGTCTGTTGTTTGAAATGGCTAGGTTTTATGCCCCCACCACGATCTTCATCGATGAGATAGATTCTATCTGCAGTCGAAGAGGAACCTCTGATGAACATGAGGCAAGTCGCAGAGTCAAGTCTGAGCTGCTCATTCAGATGGATGGAGTAGGAGGAGCTTTGGAGAATGATGATCCTTCCAAAATGGTCATGGTATTGGCTGCCACTAACTTCCCATGGGACATTGATGAAGCATTGCGGAGGAGATTAGAAAAAAGGATATATATACCTCTGCCGACAGCAAAAGGAAGAACTGAGCTTCTGAAAATCAATCTTCGTGAGGTTGAGCTGGATCCAGATATTCAACTGGAAGATATAGCAGAGAAGATTGAGGGGTACTCTGGTGCTGATATAACTAACGTTTGCAGGGATGCATCCTTAATGGCCATGAGACGGCGAATCAACGGTCTCAGTCCAGAAGAGATCCGTGCACTCTCTAAAGAGGAGCTTCAGATGCCCGTGACCAGAGGAGACTTTGAGTTGGCTCTTAAGAAAATCGCAAAGTCTGTCTCTGCAGCAGACTTAGAGAAATATGAAAAGTGGATGGTAGAATTTGGATCTGCTTGAATTTCTGTCAGCTCTTTCATTTCTGGTATTTTTGTCTATAAAATGTGAAGAAATTCCAGCAATTTTTTTTTTTAAAACAGGTTTGAAACTTTTCATTGGAGAGATTTTTCTCTGAAAGGAAAACAATTTAAAACCACAAAGAGTATACATGTAGTTGAGAAATAAGAAAAGCCTACACAGAGAGCCTGACATTCACGTGTCCATGCGTTATGACTGCACACCCGCACCAGAGTGCAGAGGGCTGAAGAAAGTGACCCATGTGCTGTTGTAGAAACTCGTTTACAGAACATCTAGAAGGAACTCTGTTTCTGACTTTGCATTTTTTTTCCTCTTCTTTGCTCTGAACATGAAGGACCTGTTTCTGTTGACTTTTAGCATCAGAACAGGGTTTGTGTCAGAACTGTTCCTTATTGTGAAGAGTGATAGTTTTGGAATAAATAATGAATCTGCTAGTTAAACCTTCAGCATTCAACCACTACTGTTAGAGGCTGTTATACCGTTTGAATGTTTACCTTCCCTTCCCTCACCATTTCCTCCACTAGCTATTTAATCACTTATTGAGCTTTGTGGGGGTGTATAGCTTCATGCTTTGTGGTTTTTGAATCATCTTGCCAGGTGGCTCCTCTGGTCTGGAGTATTTTTGCTGGCAGTACTTCATATTGGAAGGGCGGGAAAAGTATCATGTTTGCATAAGACCTTCCTCTTCGTTCTAGACTTCTGAGTTTGTTTTCACTCTTCTTTCAATAAGTTCAACAGATCAACCCTTGCTCTAACATTGTTTTTTGCTGAATTTGCCTTTCGTATTCTAAATAAATGCTTTGGTATTCTAAACAAGTCCACTCTCTTGTGGCTAATGCAAAACAAAGCAAACTCTTTATGGTTTCTGGACAGCTTGTTTATTAACAAAACAGCATCGTGCGTAATGAATGATGTTCAGTTGAACGTTTAGAAACCATTCCTTGTCTAGGTTGAGTGCTTGTATGCACACTAAGGTTAGGTTAGAAATCAGCCTTGCTCATTCACTTCAGCAGGAATTAGACAAGAAGGAGGCCAGAAAAAGAGAGGCCGTGTATCTAGTTATGAGTAGCCGAATGTTAGTTTTTAAAAATTGTTATTTTGACTGGGCAACCTATGCTTTGATAGTCAAGCTTTAAAAAAAATTATATTGGATGGTATCCTGAATTTTTAATTTTAGACAGTAGCTAATAATTTAAAAATAATACAGCTTTTTTCACAGTTGAAGATAACTTTTAGCAACTTGCTTAGGAGCTTTTGCCCTACTAAGACTATGTAACTTTTAGATAAGTCTGACTCTGACCTGCAGTATTCATCTGATGCTTTAAATCGCCCTCCCCCTTTCCTCTGAGGCATAGATTAAAAGAGATAAAATCATGAGATATCATGATTTTAATTGAATTAGTTCATCTTAATTCCTTTTATTCATGAACTTTTAAAAATAAATAATCCCACTAACATAATCTTGCAGACTACTGCCAGCCAGTAGCTTATTTTTTTCATGAAATCCAAGGGGTCATGGTTAAAACCTTAGTGTTTTGATTGCCAAAAATTTTGTGTATGCTAGTTGATTAGTTAGACCATATTTCTAGATTTTATGTTATTTGTCTTGGCTTCTGTTTCAATTTTTCCTGACTTCTTCATGCATAATAACATAGTGATTGTGGTTTTTTAAAAAACTGTCAGTTGGTTAGTTCCTGGAGCTTGTCTTCACTGTGTTCCGTCAGTCGTGTGTGCTTTTTCACTTCCCTGGTTTTTCTGTAGAGGATGGTGAATGCTCGGTATGTCTTAACCCCTTAAAGGATCCTGGCTCTAGCTAATGAAAATGAAAGGCACGGTAACCTGTGTGTGCTTTGGAAAGATTATATATGAAAGTTTTTCTTTCTCCAAATTTGCTTTAAAATTAGAACTGGAATCCATTTGCTTGAACAATACAACTGTTATAGACCTGGCTGTTTACAAGAACCATTTTTGCCATTTCCCAAGCTACATGTTTATTCTGAACATGTACACATGTAATTGTGGAGAACCTGTAAACCTGTTACATGTTTATTGCAAACATTTTGCTTGGATAATTCCTTTGTTTTTAGAAGGAAATTAATATTCATGAAATGTGCCAGACAAATGGCTGAAACCTTCTATAAATCCAAGTAGAAAGTAGACGTTGGCGTCCAGATTTTGTCTTCTAGTCAGCAGCGTCGTCAGCGGTCCAGAATGACCAGATACGTGCTGGGCTTGGACCTCTGCCTCCAAAATGCCAGGACAGCTTGAAAGAAGTAGCACGCTATGTTCCAGCTGCCTGTGGGGGCTTTGTTTGGGCTCTGGAGATTGCACTTTTTATGATGTGATATTTGACTGTCAAAAAGTAGGCTGAAATCGCTAATTATTCAAAAAATGAGCAAGTGTCTGGTGAATCTACTGTAAACAAACATATAGCTGCTACACCAGGAAAAATACACTGCCCAGATTTTCAATATAATTGTCACTCTTCCACTTCGCTACGTGTAGGCTGACTCTTTGAAACATGACATTATTGATGCCGTAGGTTTTGAACAGCTTGAGTTTGAATTCCTTCCTGGGAGGTTTCTGTATACGCTGCTGAATCCATGATGAGAATCATAGATCAGCTGACACTGTTCTGTTTTTACTCTCCTGACCCTGAAGGACTTAGAGGTCCAGTGAAGGACAAGGCAGGCGTTTGCTTGTCCTGTGGGCTTTGGCTCCTCTGGGTTGTTTTGATCATTGAGTCTTGGCATTATAGATTCCCACACTTCCGTTTCTCTTGCGAACAGTAAGTCACCTTAGGGTATTTCCTGTGTGTGATAGGCATAGAATGCTAAGGGTAATTGCTGGCCTTTTCCAAGAAAGGGCCGCTTTAACCCCATAAGGAAGCAATGGTAGTCATTCTTTTAACATTCGTTTTGTATCTTCTGTTCCATAACTGTTTTGATTGTATAGATTTGTTTATATACTATATATACTACTTACTTTGTGATGTACATAATATTTATGTGAATTTAAAAATCTGTCACAATAGAAAAGGGTAGGAATTACAGTTGGAAGGCATATTGGAGGAATTCAGATATTTAAACCCCAAATGTTTTAGTCTCATTGCTGCTAACTTTTTTTTTTCAGAAAAAGCTAAAACCACATTATAATTACTGTGTTTACTTATTTATACTTTTAAATTAGGCTTTTTATACTCACTTATTTAATTTTTTAGGACATTTGCTTTTAATGTTGTTTTCTCTTGTGGAAACGATATGAATATTTAAAAAATAAAGCCCTAAGTAACACTTATGTTTTTAAACATTCACAAATTGACAATAATTCTTTGCATTTTTATTAGTTTTTTTTTTGGCTCTGAATAACTCTTTAAGTTGAGGGATATTTCTAAATTTCCAGTTGACTTGTTAATAAAAACAGGAAAAATATGAAGGTAATGTCATCAGATTTAGTTTTTTTATTTTCCGTTTCTCATTTCTTGATTGATTTTATTATATATATATATATAAATAATCTAGATTCTGCTTTGTCACCAGCAGTGTGTACATTTCTGGAAATTTGGCACAACAAATAGGGAATTAATATGGAGGTTTTCCTCCAGTGAAAGGACTCTGATTTTATGTTCAAAATTATAAGACACACTTTTGTTCTCCAAGCTCTGAAATGACTAAATATTACCCTTTGGAAAACCTGAGTCTTTGCACATGTCATTTCCGGAGTCTACCTCAGTTCAGCAAGCTTAGTTTCACGTGGGAATGAACTGAACCATGTTGAAATTCAGTTCATCATCTAGGCAGATTTGTTTTTTGAATCGCTTCCTTCTCTCTCCTCTCTCACTCACTTTTTTTTTTTTTAACACTGAAAGTTTAATTGAAGATGCTGGTGGTTCTTCCTCTGGCAAAGTCACACCCTCCAGTTGAAGCCTCTGCAAATATCTACATTAGTCTTCCCACCTCTGTCACGGCGGCTTGACCACCAGTGCACACTCGTGTGGCAAGGACCTAACCCTTCCTGTACAAGGGCCTGAGTGCTTCGTGATGACACACAGAGGTGGGCATGCGACACGTCCATTCACACGGCAGCAACTGATGCCCTCGGTTAAGGCTGTGCAGACACAGCGTCCAGTAAGATCGCTCTGTGCTGTGACCATTGGTGTTCTGTTAAGATTCTCGTTTCAGTGTCTGTGTCCCAGTGTTTTGAACCTAACTTAAAAAGATGTTTCCAAATTGTATTTATTAGATGTGCTTTTCCTTACATTTTGTGTGGCCACATTGCTAGTTTCACGAGCTGAGCTGTGTCTGTGCATAGAGTGTAATTTGGTAATAAATTTCTAGAGCGTGGCTTGTCGGTGTTTTCTTTGTGGTTCATGTTTGATTTACAGTCTCTAGTCCACTTATTGCCACCAGTGGGAGTAACAAATCCCTCGCAACAAGGGATGACTTTTTCCAGAGTTTTAGTTCTTACAAAATCACATATTGTAAACCCATTATTTTGTGTTTGCCATGCATTATGCTAATAACTTCAGGCTTGATACAGGTAAGATAAGAATGGCTTTTCAGTTAATTTTCTTTTAACAAATACATTT EMBV3_27385 CAGGTGGTATGTAAGAAGTACCGGGGATTCTCCAGATGATGAGGAAATCGAGCTGGCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15067 AAGTGGTTCTGGAAACTTCGGTGGCGGTCGTGGAGGTGGTTTTGGTGGGAATGACAACTT Gene GeneID:787289|LOC787289:XM_002707707:536_cdna Constitutive 0 NULL GeneID:787289 25 GENE LOC787289 NULL similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) EMBV3_43569 CAATGCTGATGAATAAAGTCAAATAAGGCCTAAGTAGATGGAGAAGAATTCCTGTTCATG Gene BVT0102_037387 + 1 EMBV3_43357 GK000008.2:25711250-26010375 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40230 GACATTTAGCACTGTTAGCCTCTGCTTCTGGTCATCACGCACAGTTAGGGTTTTCCCTCG Gene BVT0102_012282 + 0 NULL GK000016.2:71024142-71061935 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03952 CGGCTGCTGCGAGGAGGAAGACGAAAAAAGATACTCAGAGGAAAACAGCGACTCGAGCTT Gene GeneID:512913|IFI6:NM_001075588:152_cdna Constitutive 0 NULL GeneID:512913 2 GENE IFI6 6-16 MGC137037 interferon, alpha-inducible protein 6 EMBV3_19007 CTATTTGAATGTTAATTTTTTGTTTCTAAAGTTTAATTTTAAGATGTTTGAATGTTCAGT Gene GeneID:540964|TCERG1:XM_002689280:96_cdna Constitutive 0 NULL GeneID:540964 7 GENE TCERG1 NULL transcription elongation regulator 1 EMBV3_11333 GGCCATGCATCTCTGGCCATTCATCTCTTGCTTTGAGAACCCAGTATGAAAAGGCAAAAA Gene BVV0102_300830 - 1 EMBV3_00811 GK000001.2:139363857-139786932 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03313 TGACGGAGGATGATGAGGATGAGGACGACGACAAAGAGGATGAGGTCGGGTACATATGGT Gene GeneID:511211|SPOCK1:NM_001075500:16_cdna Constitutive 0 NULL GeneID:511211 7 GENE SPOCK1 MGC139534 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 EMBV3_25980 GGTCGGGGTAGCAACAAGGCACTCTTGCATGTTGTAGTTTATTGAAAGGATAAGTGACCG Gene GeneID:616908|LOC616908:NM_001076437:207_cdna Constitutive 0 NULL GeneID:616908 6 GENE LOC616908 NULL hypothetical protein LOC616908 EMBV3_00828 CTGAAGTTGGACAAGACCATCCTTTCTATGTTCATGTCTTTCTTGGGGCCAGCAGCCTCG Gene GeneID:327689|CPSF2:NM_175808:139_cdna UTR3_Alt 3 NULL GeneID:327689 21 GENE CPSF2 NULL cleavage and polyadenylation specific factor 2, 100kDa EMBV3_01017 AGGCCTGGAGGACTTTGGGACTGTGTGGCCAGGTGGGCTTTGGTAAAAATTTGATTTCTA Gene BVV0102_386168 + 1 EMBV3_35905 GK000007.2:14133585-14148743 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25865 AGTTGCTCCCTGGAGAAGTGTAACCTCAAGGCCAAGAGCAATGTGGATTTGCGGAGATCG Gene GeneID:508960|KCNA5:NM_001015552:17_cdna Constitutive 0 NULL GeneID:508960 5 GENE KCNA5 Kv1.5 potassium voltage-gated channel, shaker-related subfamily, member 5 EMBV3_02674 CCGACACACACATTGGGTTCGCTGTGCCAAGTCTTATTATGGAGGACTAACTTTGATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37931 TGTTTAATTTTGGCAAAGAGAAGTTTGAAGGTTTTAGATGACACTGAAAGGGGTTCAGGA Variant GeneID:507945|DUT:NM_001077873:47_cdna 436^506 2 EMBV3_16755 GeneID:507945 10 GENE DUT NULL deoxyuridine triphosphatase EMBV3_13457 TTCGACCCTTGAGTCAGGAAGGTCCCCTGGAGTGGAAATAGCAACCCAAATCCCGTTTAC Gene BVV0101_016595 + 0 NULL GK000018.2:64963801-64976078 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087720 TCONS_00087723 TCONS_00087722 TCONS_00087726 TCONS_00087724 1 XLOC_052579 Coding TCONS_00087726 XLOC_052579 Coding Coding LOC100848569 18:64961363-64966306 = TSS65100 1046 1 TCONS_00087726_1 148 0.658699808795411 4 0.789154188587616 0.000210444257368795 1.95929705358691e-182 0.000255117525951565 0.000119715008662608 0 2.39382413037435e-05 0.000213142785543986 0.000826078274806976 3.77157060394964e-05 0.000579805579422339 0.000226110771991709 3.58697775561463e-05 3.19850492573039e-05 0.000143110350506257 0.000959787223735417 0 0 9.24132352674443e-156 7.63356576558593e-05 0.000197484675371752 9.41777386221184e-05 0.000475980377988557 0 0.00131161820093245 0.000155319421745569 0.000539769383649695 6.44916014174615e-05 5.99001703212237e-05 0.000408541104330315 0.000669971028000701 XM_005219812.1 ZNF416 PREDICTED: Bos taurus zinc finger protein 416 (ZNF416), transcript 0.0 1090 100.00 0.576481835564054 NM_001277093.1 ZNF550 Homo sapiens zinc finger protein 550 (ZNF550), transcript variant 6e-36 156 87.90 0.117590822179732 TCONS_00087726_1 sp|Q5CZA5|ZN805_HUMAN ZN805_HUMAN Zinc finger protein 805; 4e-17 79.7 80.43 0.304054054054054 1 coding 0 0 0 0 -0.127033141560622 0.276962775336229 0.0274400550592669 0.69397340599023 ATGCCGATGACTCAGCTGGGTCCTCTGGAGACACCTTTCTCCTGGAGGGATGCTGAAAAAGAACTACCCAGAAGCCTCTGCTACGTTTGGGAGCGCCAGGCTGATGACGTCAATGAGAGGGGCGTTGCCGGCTCGCGTGGTCTGAGGCCGGACTTCCTGCGCCGCCAGAGCAGGATTTTCCTTTCGAGGCTGGTGTCCCCGCACTCGCTAGGATCTGTAAACGGGATTTGGGTTGCTATTTCCACTCCAGGGGACCTTCCTGACTCAAGGGTCGAACCCGCGACTCCTGCATTGGTGGTGGTGACCTTCAAGGATGTGGCCGTGACCTTTACCCCGGAGGAGTGGGGACAACTTGACCTAGACCAGAGGACCTTGTTCCGGGAGGTGATGCTGGAGACCTGCGGGCTCCTGGTCTCCCTGGCGTGGAAGCAAGTGGAAGACACATGAGTGGCACCACTGACAGTTAACCACAGCGAGGCACGAGGGGACACTTTTGCTTTCCGTCCCCACGAAGCGCTGATTGTGTAGAGGTCTTCGTTCTAATGGGAGTTGTGCTTCTACTGCTGCAGAAGAACGACTCCGTTGTCCTGGAAGGTGACCCTGCCCATCAGCCACTTTGTGCTCCTCAGACTTCTGCATCAACAGGGAGAGAGTGACTGTGTTGGCTCCGGTGGTTCAGTCTGATACCAGGAGCAAATTGGACTCTATTTCCCACTGCTACTTGCACAAAGGAAGTGTGTCTGGAATGCAGAGGCCCCTGAAGGTGTCTTATTGTGACCCATGATTAAGGTCAATGAGAACTATAACAGCCTTATTTAGGCAGGACAACTCATAGCCCAGACCCTTCAGGAAGGAATGATTGGTCACCTACTAGGGAATAAAAAAGGAATATCTGAAGTGGTATTGAGAACCAAAGGATTTGGAATGGGTTGCAGAAGAGATACATACTAGTTGTGGTTTTTTGACCATATAGAAATGAGGATAGTAACCTGTAATGTCATAAGTATTTCTTCCTTCTTTTGCCATGAATATGTGTGTATGTTCAA EMBV3_19415 CTGTCTCGGCCACTGTCCAAAGAGCCTTCAGTCAAGACCAAGAAGCACATTTCTCCTCTG Gene GeneID:614724|LOC614724:XM_002685708:391_cdna Constitutive 0 NULL GeneID:614724 2 GENE LOC614724 NULL similar to chromosome 1 open reading frame 130 EMBV3_29584 CTGCTCCTGGGAACTGCCTACAGTTTCTACCTCTTCCACCCTCTGGCTTATGGGATGGTA Gene GeneID:537054|POMT2:XM_002691099:242_cdna Constitutive 0 NULL GeneID:537054 10 GENE POMT2 NULL protein-O-mannosyltransferase 2 EMBV3_10722 CCAGGGAAAATGTGTGGAAGGCATGGTGGAGATCTTTGACATGTTGCTGGCTACTTCGTC Gene GeneID:100337072|LOC100337072:XM_002690343:2_cdna Constitutive 0 NULL GeneID:100337072 9 GENE LOC100337072 NULL estrogen receptor-like EMBV3_11116 TGAGCTAGGAGTTTGGACCCAGTTCAGTGAGGGTCTTGGGTTTGTGCCTTTGGGGCAGAC Gene BVV0102_002492 + 0 NULL GK000016.2:55035166-55065514 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27236 CAAGTCAGCAAGGGCCAGGAGACCACCCTGTGCTGCAATAGCGACCTGTGCAATGAGGCT Gene GeneID:618714|LY6D:NM_001076517:131_cdna Constitutive 0 NULL GeneID:618714 14 GENE LY6D MGC143237 lymphocyte antigen 6 complex, locus D EMBV3_18295 TGGGATGCAAGGTAGCATGGGTCCAAGAGACGTGTGGGAGAGTGAGCCATGAGGCATTAA Gene GeneID:540741|SP1:NM_001078027:57_cdna Constitutive 2 NULL GeneID:540741 5 GENE SP1 NULL Sp1 transcription factor EMBV3_14741 TGAATGACATTGATTCCACTTCCATTGAAACTATGTACTCTGTTGCCAGTCAGTGTCTGC Gene GeneID:533692|IRAK4:NM_001075998:27_cdna UTR3_Alt 3 NULL GeneID:533692 5 GENE IRAK4 IRAK-4 MGC137816 interleukin-1 receptor-associated kinase 4 EMBV3_24870 TGTGGGGAAACACCTGTATGTCTTCGGAGGAATGACTCCCACAGGAGCCCTGAATACAAT Gene GeneID:533613|RABEPK:NM_001035399:32_cdna Constitutive 2 NULL GeneID:533613 11 GENE RABEPK MGC133858 RAB9P40 Rab9 effector protein with kelch motifs EMBV3_14307 ACCGTAGTGCGCAGATAACAGAATGGCTACCCTCTCATCCAAACCATGTCCCTTAGACAG Gene BVV0102_236101 + 0 NULL GK000030.2:145507238-146050000 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05459 CACCTTTGGGATTTGGGAAGAAAGAGCAGTTATCAGGCACGGTCACAGTTTGCGTTTACG Gene BVV0102_256781 + 0 NULL GK000023.2:52064923-52099235 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133742 TCONS_00133744 TCONS_00135518 TCONS_00133743 2 XLOC_081195 XLOC_081742 Coding TCONS_00133743 XLOC_081195 NonCoding NonCoding DUSP22 23:52098180-52099241 x TSS99824 747 3 TCONS_00133743_3 89 2 0.297169811320755 0.0032033843925461 3.9160321302699e-06 0.00222045550581114 0.00162492745459818 0.00404423018377534 0.000189162709052285 1.16048987294598e-07 3.33663405085519e-11 0.00311437935120062 0.000134913356347958 4.90315042670332e-05 6.70127801042185e-05 0.000887234768814216 6.0002488250788e-09 0.000953482250329123 0.0011305513719922 0.00030303494022109 0.00349027295447183 0.00368487076770049 0.00572168797992745 0.000903663820877358 0.000874188443059722 0.000280571072932771 0.000246867616290179 0.00291987162493507 0.000191408494289181 0.00160920523102622 0.000128581266521676 0.000136474128955109 0 XM_005223916.1 DUSP22 PREDICTED: Bos taurus dual specificity phosphatase 22 (DUSP22), 1e-41 174 84.94 0.21954484605087 XM_003403788.2 LOC100653247 PREDICTED: Homo sapiens dual specificity protein phosphatase 22-like (LOC100653247), transcript variant X1, mRNA. 4e-17 93.3 69.96 0.319946452476573 0 noncoding 1 0 1 1 -1.22228801952455 0.139523142699841 -0.114992041674834 0.142787370563306 AAAACAGCTTTTCAGAAACCATTTAATGAGGTAGCTGAGATCATCTCACATCCACGGCAGACAGAGGTGCTTAATGAGTTCACAGGCATTTAAACATATTCGTAAACGCAAACTGTGACCGTGCCTGATAACTGCTCTTTCTTCCCAAATCCCAAAGGTGCATGCATGCCTTGCAAAGAGGCCCAGGGAGACAGCGGCAGCAGGCCGGGAGGGAGGAGCTGGACGGGAGCTGAGGGAGGGCATCCGGGGTGCTCCCCACCCAACACCAGTGCAGGCGGACAGAGCCAAGCAGGACTCCGAGAAGGGCAGGGCTGAGTAGGGCCGACACCCCAAAACCACACTCAGGAGGCTGCCCCCATGGCCACAGGGCAAGCCCAGGATGCTCTGGAGAAAAGCTTCTTCACAGTCACCTCCCAACGCGGCCCAGTGGGTCTCAGACGAGGAGAGGCCACGAGATCAGTCTGGGCACTGTGGCCTTCACGATGATACCCCAACACACACACACCCGTGTCACACACATCCATGCATACACACCTGTGTGCACACACACCCATGTCTCACACACACCACACCCGTGTCACACACATCCATGTACACACACCTGTGTCACACCCACACCTGTGTGCAAATGTGCCTGTCACACCAATAACACACCCATGTCTTACACACACACCCGTGTCACACACACCCCGGCTCGCCCGTGGGCATAACAGTCAGCAGTGTCTGGCAGCACAGAAGCTGGGGGGC TCONS_00135518 TCONS_00135519 r 5' 0 TCONS_00135518 TCONS_00135519 r 5' 0 EMBV3_31369 AGGTCCGGCTGATGCGGAACAAATCCTCAGCACTCCCTCAACATCCTGGGCCAGAAGGTG Variant GeneID:505749|RBM10:XM_002700061:29_cdna 272^345 3 EMBV3_23386 GeneID:505749 X GENE RBM10 NULL RNA binding motif protein 10 EMBV3_32053 GTTTCTGGAAAGGTTTCACTAACTGATGAGATATGACGATCCAGTCTTGGGGCCTCGGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00290 GCTGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGTCGCAGCAAAGGCAAACTTGGAAA Gene GeneID:533796|BICD1:XM_002687697:86_cdna Constitutive 0 NULL GeneID:533796 5 GENE BICD1 NULL bicaudal D homolog 1 (Drosophila) EMBV3_07571 CCTATCAGGAAAGGACGTGGCAGGCTCTCAATAAAGCCCCAGATCCCTATACCTCAGCCT Gene GeneID:100140162|LOC100140162:XM_002692245:1518_cdna Constitutive 0 NULL GeneID:100140162 13 GENE LOC100140162 NULL similar to Lck interacting transmembrane adaptor 1 EMBV3_18461 GGTAAATCACTTGTTTAGGGACTTGGCACTTAAAAGACTTATCCCTTTCCTCCAGTGGTG Gene GeneID:535494|PPIC:NM_001076910:23_cdna Constitutive 0 NULL GeneID:535494 7 GENE PPIC MGC140018 peptidylprolyl isomerase C (cyclophilin C) EMBV3_10518 GCCTCCCCATTAACCTTGAGAAATGTGGAACAGGAGGAAAATCGTTAAGCCCTTTCCCAG Gene BVV0102_147587 - 1 EMBV3_09063 GK000011.2:45543545-45583100 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027757 TCONS_00027756 1 XLOC_015324 NonCoding TCONS_00027756 XLOC_015324 NonCoding NonCoding - 11:45552987-45582128 - TSS19608 527 1 TCONS_00027756_1 36 3 0.982017844886754 0.000642577212614958 1.26868087630181e-248 0.000327394359482309 0 4.24093383528628e-87 2.04979309348233e-151 8.03150799903158e-139 0.000661392341766619 0.000118505645102141 0 0 0 0 2.50575500171667e-05 0 0 0 0 4.14612586058022e-21 0.000194546742235457 0.00023361601058682 0 0 0 2.29731833579607e-05 5.14072847923901e-05 0.000149811710471997 0 4.96589486542253e-06 0 XR_227063.1 LOC101903880 PREDICTED: Bos taurus uncharacterized LOC101903880 (LOC101903880), 0.0 946 100.00 0.992409867172676 0 noncoding AGGCCTCCCCATTAACCTTGAGAAATGTGGAACAAGAGGAAAATCGTTAAGCCCTTTCCCAGAGGAGGATTCTCACATCTGAAGCGGCCTCCTGTCAGGACGCCCACTCCTTAACACGCTCGCAACCCATTCCAGTATCCAAGAAGGCTGCCAGGTGACACTTTCTTTGGAGCCAGACAGAGACCCCCCCTGGGTGGGCTTCCAGGTATTGAGGGAATGGGCCAGCTGTGTGCAATGAGGAGACCCCCTCTCACCCTGGCCGGCTGCACACACGCCTACGAGGACGGCGCGGAACCCCTCATTTGCACCCGCACAACTGCTGCGTAGGCTCCGTGGCCCGAACAGAGAAAGAGGCGGGTTGTGCTGCCATCTGGCGTCCACACGAGATATCTCCTAGAATATCACATGCATGCTTTAAAGCTTCAAGAACCTCCGAAATTTCCTCTTTTCTATCACTAAAGGTTTTTAAGTCTAGTAAATTAAACTTCAGGAAATAAAATGAACGCTAATAAGCTGGCACTTTGTCC TCONS_00024861 r 5' 29136 TCONS_00024861 r 5' 136 EMBV3_22531 AGCCCAAATACCCTCGGAAGAGCGCGCCTAGGAGAAACAAACTTGACCACTATGCCATCA Gene GeneID:786430|LOC786430:XM_002700032:131_cdna Constitutive 0 NULL GeneID:786430 X GENE LOC786430 NULL similar to ribosomal protein L23a EMBV3_29622 TTCCTGGGAGCTGGGTCTGTGGCGGGGACCCCGCCGCCGCCGGAGCCGGCGGGGAGATGG Variant GeneID:282032|RASA1:NM_174449:6_cdna 843^900 1 EMBV3_43471 GeneID:282032 7 GENE RASA1 NULL RAS p21 protein activator (GTPase activating protein) 1 EMBV3_38514 ACAAACAGCGGAAAATCTACTGCGTGGCTTGTCAGGAGCTCGACTCAGACGTGGATAAAG Gene GeneID:511466|SSSCA1:NM_001038528:595_cdna Constitutive 0 NULL GeneID:511466 29 GENE SSSCA1 MGC133497 Sjogren syndrome/scleroderma autoantigen 1 EMBV3_25145 CCCCTTGAAATGTTAAACTCAATGGCTGTATTTTAAATTGTGCAAAATATTGGTATTAAA Gene GeneID:530116|DAZL:NM_001081725:17_cdna Constitutive 2 NULL GeneID:530116 1 GENE DAZL NULL deleted in azoospermia-like EMBV3_29135 AGATCCCTCAGATACAGCATTTATCCTTGGCTGACAACCATATTGAGACTCTGACTGGGC Gene GeneID:768065|MGC133804:NM_001077122:173_cdna Constitutive 0 NULL GeneID:768065 1 GENE MGC133804 NULL hypothetical protein MGC133804 EMBV3_07450 TTGTTGACACGCTTTGCGTCTGCACAGTTTCCCAGTTACCAGCCTCGCCCTTCGGGGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03249 CGTGCTGGCAGCCAGTTCCCTAGCCAATCTAAACTTCTATTTAGATGTGAAACCAGTAGC Gene GeneID:505518|PLET1:NM_001113538:41_cdna Constitutive 0 NULL GeneID:505518 15 GENE PLET1 C15H11ORF34 placenta-expressed transcript 1 protein EMBV3_01776 TGGAGAATCTGGGGTGAGGGGAGCTGAGGTCAGTGAAGATGAAGTCAGTGTAGACTTGAG Gene GeneID:535982|TBX2:XM_002695607:8_cdna UTR3_Alt 2 NULL GeneID:535982 19 GENE TBX2 NULL T-box 2 EMBV3_01002 AGACAGGAGACTAGAACTGCAAACCTGCAATGGCAACAATGTTAAAGTTGAGAGTTTCCC Gene BVV0102_053696 + 1 EMBV3_39696 GK000010.2:32866742-33665330 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43490 TCAACGCCCTTTCCACCTCTCGGCAGTGCGGAATCAACAGTGAGACCATTCTGAAACCAG Variant GeneID:517539|MTHFD2:NM_001075755:32_cdna 114^298 1 EMBV3_17658 GeneID:517539 11 GENE MTHFD2 MGC142685 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase EMBV3_19244 AGGGGTAGTGGGAGGTCAGACAAGCTGCATTTCAGAAATGCTGTCGTAATGGTTTTTAAC Gene BVV0102_183199 + 0 NULL GK000013.2:62721125-62728052 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18002 GATGCTGGAAAGTTTGGTGGGATTGATTATTGCCATTCGATTACTTTTTGAGTAGGAGTC Gene GeneID:281909|MANBA:NM_174387:2_cdna Constitutive 0 NULL GeneID:281909 6 GENE MANBA NULL mannosidase, beta A, lysosomal EMBV3_21675 CTTTGCTAACTAAAACTTCTTGGGGGTCTGGACGGTCAACATTTGCCTGAGAAGGTGCGC Gene BVT0102_199075 + 1 EMBV3_18395 GK000012.2:26001780-27400066 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00129783 TCONS_00231338 TCONS_00249539 TCONS_00066283 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00209830 TCONS_00037672 TCONS_00020157 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00177370 TCONS_00175855 TCONS_00218945 TCONS_00169198 TCONS_00250930 TCONS_00166977 TCONS_00008224 TCONS_00174963 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00157439 TCONS_00189806 TCONS_00038458 TCONS_00041057 TCONS_00185881 TCONS_00109027 TCONS_00155780 TCONS_00124585 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00178325 TCONS_00161667 TCONS_00167260 TCONS_00010054 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00110323 TCONS_00156838 TCONS_00130290 TCONS_00063486 TCONS_00207365 TCONS_00057310 TCONS_00249772 TCONS_00010471 TCONS_00088088 TCONS_00021595 TCONS_00157613 TCONS_00117619 TCONS_00136897 TCONS_00199424 TCONS_00155778 TCONS_00080066 TCONS_00059708 TCONS_00071033 TCONS_00161835 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00249569 TCONS_00249087 TCONS_00223554 TCONS_00070810 TCONS_00107832 TCONS_00131550 TCONS_00199037 TCONS_00110403 TCONS_00019199 TCONS_00122479 TCONS_00122686 TCONS_00157036 TCONS_00180345 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00218178 TCONS_00252353 TCONS_00224113 TCONS_00007677 TCONS_00197928 TCONS_00116100 TCONS_00250720 TCONS_00169197 TCONS_00124846 TCONS_00010366 TCONS_00152744 TCONS_00038381 TCONS_00222766 TCONS_00242885 TCONS_00209846 TCONS_00023373 TCONS_00252810 TCONS_00207069 TCONS_00065476 TCONS_00209711 TCONS_00013635 TCONS_00252107 TCONS_00040883 TCONS_00148280 TCONS_00056146 TCONS_00249011 TCONS_00250530 TCONS_00123620 TCONS_00176735 TCONS_00248864 TCONS_00031939 TCONS_00039951 TCONS_00169199 TCONS_00131137 TCONS_00155779 TCONS_00142123 TCONS_00063181 TCONS_00009259 TCONS_00234065 TCONS_00252226 TCONS_00111497 TCONS_00209636 TCONS_00007431 TCONS_00222455 TCONS_00089952 TCONS_00245928 TCONS_00233372 TCONS_00218896 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00085967 TCONS_00251914 TCONS_00063080 TCONS_00199802 TCONS_00207755 TCONS_00197601 TCONS_00250246 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00040740 TCONS_00251804 TCONS_00200529 TCONS_00064619 TCONS_00135546 TCONS_00115148 TCONS_00250726 TCONS_00221884 TCONS_00122313 TCONS_00177995 TCONS_00020023 TCONS_00251907 TCONS_00109858 TCONS_00218898 TCONS_00218552 TCONS_00007359 TCONS_00031910 TCONS_00251929 160 XLOC_107421 XLOC_069855 XLOC_078496 XLOC_140827 XLOC_152482 XLOC_040997 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_128341 XLOC_021501 XLOC_010835 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_107144 XLOC_105634 XLOC_132264 XLOC_103305 XLOC_153873 XLOC_101813 XLOC_003782 XLOC_104746 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_095894 XLOC_115843 XLOC_022282 XLOC_024868 XLOC_111934 XLOC_064932 XLOC_094822 XLOC_076129 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_108098 XLOC_098554 XLOC_102096 XLOC_005606 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_066227 XLOC_095298 XLOC_079001 XLOC_038213 XLOC_125882 XLOC_035109 XLOC_152715 XLOC_006022 XLOC_052875 XLOC_012268 XLOC_096068 XLOC_071785 XLOC_083108 XLOC_121077 XLOC_048950 XLOC_036490 XLOC_042806 XLOC_098720 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_152512 XLOC_152030 XLOC_136854 XLOC_042587 XLOC_063742 XLOC_080255 XLOC_120690 XLOC_066307 XLOC_009879 XLOC_074034 XLOC_074241 XLOC_095496 XLOC_110113 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_131641 XLOC_155294 XLOC_137409 XLOC_003238 XLOC_119588 XLOC_070269 XLOC_153663 XLOC_076389 XLOC_005917 XLOC_092509 XLOC_022206 XLOC_136073 XLOC_149548 XLOC_128357 XLOC_014040 XLOC_155751 XLOC_125588 XLOC_040195 XLOC_128222 XLOC_008165 XLOC_155048 XLOC_024697 XLOC_090162 XLOC_033949 XLOC_151954 XLOC_153473 XLOC_075172 XLOC_106509 XLOC_151807 XLOC_018184 XLOC_023768 XLOC_079842 XLOC_086548 XLOC_037908 XLOC_004815 XLOC_143544 XLOC_155167 XLOC_067397 XLOC_128147 XLOC_002992 XLOC_135764 XLOC_054733 XLOC_150855 XLOC_142854 XLOC_132215 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_052005 XLOC_154855 XLOC_037807 XLOC_121454 XLOC_126270 XLOC_119262 XLOC_153189 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_024554 XLOC_154745 XLOC_122181 XLOC_039343 XLOC_081769 XLOC_069449 XLOC_153669 XLOC_135195 XLOC_073868 XLOC_107768 XLOC_010701 XLOC_154848 XLOC_065762 XLOC_132217 XLOC_131872 XLOC_002920 XLOC_018155 XLOC_154870 Coding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_10187 CAACCATTTAAAAAATGTAAAAATGATTCTTAGCCAATGGGCTTATCCCTGCTTTAAACA Gene GeneID:536956|YARS2:NM_001098088:11_cdna Constitutive 2 NULL GeneID:536956 5 GENE YARS2 NULL tyrosyl-tRNA synthetase 2, mitochondrial EMBV3_30620 TTGCGAAGAATCCAGGACAAAAAGGTTTAGGAACATCATAAACGATCAATACCAAAAGAT Variant GeneID:539869|DCUN1D1:NM_001102233:52_cdna 642^724 2 EMBV3_43590 GeneID:539869 1 GENE DCUN1D1 MGC165752 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) EMBV3_39105 TCTGGCCTGACTCACATGAGCCCCTAACTTATCTCCGTCTTCTCTTTGCTCTCTCCAGTT Gene GeneID:617805|LOC617805:XM_002687930:157_cdna Constitutive 0 NULL GeneID:617805 5 GENE LOC617805 NULL similar to CECR1 EMBV3_28607 CTTGGGGCCAGCTGACAAGTGCAGATGAACCATAGCATATCATTAAATTTCCATCAGGCC Gene GeneID:512517|TINAG:NM_001035107:116_cdna Constitutive 0 NULL GeneID:512517 23 GENE TINAG MGC127400 tubulointerstitial nephritis antigen EMBV3_21340 GGGCCAAGCGGCTGTCCGTGGAGGGCGCACCTAATGCGCAGTGATTGTCTGGAAAATAAA Gene GeneID:505787|ABCA3:NM_001113746:72_cdna Constitutive 0 NULL GeneID:505787 25 GENE ABCA3 NULL ATP-binding cassette, sub-family A (ABC1), member 3 EMBV3_00649 GTACGGCAAGTCCCTGTACTACTATATTCAGCAAGACACCAAGGGCGACTACCAGAAAGC Gene GeneID:282689|ANXA2:NM_174716:25_cdna Constitutive 0 NULL GeneID:282689 10 GENE ANXA2 NULL annexin A2 EMBV3_19949 TGTGTCACAGGCAAGGAGGTTGACTGATGGCAGGACTGAGGAAGCCTACCTTTGTTACAA Gene GeneID:505130|UBR7:NM_001082601:163_cdna Constitutive 2 NULL GeneID:505130 21 GENE UBR7 C21H14ORF130 MGC155078 ubiquitin protein ligase E3 component n-recognin 7 (putative) EMBV3_39469 TCATTTTACACATTCTATTGTTATCTGTCGGTGGGGTGGGGTGGGAGAAAGGGTATTAAA Gene GeneID:615008|LOC615008:XM_002688056:7_cdna Constitutive 1 NULL GeneID:615008 6 GENE LOC615008 NULL similar to HCV F-transactivated protein 1 EMBV3_14451 TGGGCCCCAGGGAAGAATGGTGGGTGATTTTTCAACCAGATGGAGAGATGACAGTCACCC Gene GeneID:507152|LOC507152:XM_002688846:174_cdna Constitutive 1 NULL GeneID:507152 7 GENE LOC507152 NULL similar to Uncharacterized protein C19orf39 homolog EMBV3_20903 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28630 CCGCCCACTTACGCTTTAGATCCGGTTTCTCTGGGGCGTCCTGGACTTGTTTTCTAAATT Gene GeneID:789389|WHSC2:NM_001102353:12_cdna Constitutive 0 NULL GeneID:789389 6 GENE WHSC2 MGC165843 Wolf-Hirschhorn syndrome candidate 2 EMBV3_12076 TTGGTCGTCCAGGAGAAGCGTGTCTTCGTAGCGTAAGTAGTCCAACGTCTGCTTGCACTG Gene BVV0102_092972 - 1 EMBV3_14365 GK000003.2:21475083-21490542 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169058 TCONS_00169057 1 XLOC_103266 Coding TCONS_00169058 XLOC_103266 Coding Coding TXNIP 3:21489096-21493258 = TSS126668 2864 1 TCONS_00169058_2 391 8 0.313626532083634 0.00178297651896397 0.00180373664020692 0.00301019164178103 0.00162749384639571 0.00208656643056725 0.000422620107120204 0.00196072692994785 0.00631382953596929 0.00184506743350358 0.000199762243550436 0.000312643737023662 9.13518880375219e-05 0.000318990139533047 0.000479568427092311 4.44580825392535e-05 0.00442652259885921 0.00255107488447588 0.00162748146674778 0.00305825420801557 0.00214841813429468 0.000929627450690389 0.00164128805233951 0.00070686273565946 0.00253604294669232 0.00460332356799991 0.00353505526508474 0.00433317544417426 0.00037897533258409 0.000527346948586268 0.000555301968772514 NM_001101875.2 TXNIP Bos taurus thioredoxin interacting protein (TXNIP), mRNA. 0.0 5166 100.00 0.999650837988827 NM_006472.4 TXNIP Homo sapiens thioredoxin interacting protein (TXNIP), mRNA. 0.0 2677 82.70 0.924930167597765 TCONS_00169058_2 sp|Q9H3M7|TXNIP_HUMAN TXNIP_HUMAN Thioredoxin-interacting protein; 0.0 775 94.88 0.997442455242967 2 coding 0 0 1 1 -0.0158538094717615 0.914201956578972 -0.0123284816008295 0.808655704997024 CTTCTGAGGTGGAACGCTTTAAGCCTGCCCGCCGAGAGCCGGAGCTTTCCTCCAGCTGTTAGAAAGAAAGAGCTTATTTTTCTCTTGCAATCTTTTGATATAACTCGCGACTTACATTTTTGGGTGGACGTGTTTTCGAAAATTTAGTAGAGAATTGAGAAGTGAAAAAGTTTTAACTTACAGCAAAGGGTCCTTTGAGAGTTTTGTTTTGTCCTCATTTTTAACTGTTAAGCAAATCCAGCCCAACATGGTGATGTTCAAGAAGATTAAGTCTTTCGAGGTAGTCTTTAACGACCCCGAAAAGGTGTACGGCAGTGGGGAGAAGGTGGCTGGCCGGGTGATAGTGGAAGTGTGTGAAGTCACTCGAGTCAAAGCTGTCAGGATCCTGGCTTGCGGAGTGGCCAAAGTCCTGTGGATGCAGGGATCCCAGCAGTGCAAGCAGACGTTGGACTACTTACGCTACGAAGACACGCTTCTCCTGGACGACCAACCAGCTGGTGAGAATGAGATGGTGATCTTGAGACCTGGAAACAAATATGAATACAAGTTCGGCTTTGAGCTTCCTCAGGGGCCTCTGGGAACATCTTTCAAAGGAAAATATGGGTGTGTGGACTACTGGGTGAAGGCTTTTCTTGATCGTCCCAGCCAGCCAACTCAAGAGACAAAGAAAAACTTTGAAGTGATGGATCTAGTGGATGTCAATACTCCTGATTTACTGGAACCTGTGTCAGCTAAAAAGGAGAAGAAAGTTTCCTGCATGTTCATACCTGATGGGCGGGTGTCTGTCTCTGCACGAATTGACAGAAAAGGATTCTGTGAAGGTGATGAGATTAACATCCATGCTGATTTTGAAAATACGTGTTCCCGCATCGTGATCCCCAAAGCTGCCATTGTAGCCCGCCACACTTATCTTGCCAATGGCCAAACCAAGGTGCTGACGCAGAAGTTGTCATCAGTCAGAGGCAATCATATTATCTCCGGAACCTGTGCATCATGGCGTGGCAAGAGCCTTCGGGTGCAGAAAATCAGGCCTTCTATCTTGGGCTGCAATATCCTGCGAGTTGAATACTCCTTACTGATCTACGTTAGCGTCCCTGGCTCCAAGAAAGTCATTCTCGACCTGCCCCTGGTTATTGGCAGCAGGTCAGGCCTCAGCAGCCGGACGTCCAGCATGGCCAGCCAAACCAGCTCTGAGATGAGCTGGGTAGACCTTAACATCCCAGATACCCTAGAAGCTCCTCCTTGCTATATGGATAGCATTGCTGAAGATCACCGGTTGGAGAGCCCCACTACTCCTCTGCTAGAGGACACAGATGGTTCTCAAGACAGCCCTATTTTTATGTATGCTCCTGAGTTCAGGTTCATGCCACCACCTACTTATTCTGAGGTTGATCCCTCCGTCCTGAACAACAATGTGCAGTGAGCATGTGGAAGAAAAGAAGCAGTTGTACCTACCTGTTTCTCTTCATCTCTCTTCCTGGACTCTTTAATTTTTTAGAGACTCAACAGTCTCCACAGTGGGGTACAGGTCCACCCCAGCCTCTTGACTCTCCAGTGTGGGAGGTGATCAGCAGGCAATCTCCTGGGCCTTAAAGGGTGCGCACTCGTCCTCAGCCAGCGAGATGATGTGATACAGAGTTTTTTGCTAGATGGGTTTAAAAACACGTTAGAAAAAAAACTAAGGCCCATCCCATTTTCTTGAATCTCTTTGAAAATTGAGGCATTTTCAGTAGTTTTGAGTAAGGGGTAGAAATGGCATCCTGGAATGGTGTTCCCACGGTTGAATGGAGGGGATTATATAATAGAGATATTGTTATAACAATAGATCTTGAACCTCTGCCATGTGGAGGAGAGCCAATTTAGCAAACTAAGAAAGTGAAAAGAAAAAATGGTCATGGCCAAAACTTTGGGAAAAGGATGTTCTTAAAATCATTGTTCCCCATTGTTTGTACACTTACAGAAAAAGAAAAGCCCTCCAGAATTGATTGGGTTTGGACTTTTGAGCAAGCTTCCCATTCGAATTAAAGGGGAGGAGCTCTTAAGTTTCATTGTTCAGAAAGTAGTTTTAATCAGTCATAAGGCAGTAGTAACTGGGCCCCACCAGAGGTCTTAAAAGCCATTTTTAGAGCTTGTTGCACTGTGTTCTCCTGTTGGCAAACATTTTTATGTGGGAGAATTTTTTTTTTTCATGTGACTCCTTGGAATTGATTCTGAGGCGATGTCCTTAGCACTTTAGTTTGTGTCAAATTTGGGTTTTCCTTTCTCAGATGTAAGCTAAAACTGGTCTACTATGTCTCTAGGGGTAAGCACAATGACAGGGAAAAAAAAGTGTTACTGCTTTTGAGACTTTGTCGCAGTGTACGGAATTCTGCAGTTCTGACACTGATTACGTAAGGGTTGCTGCTATCAGCCTTGCCCACTGTGACTTCTCCAAACCCAAGGAGGAACCCTAGATAAAATGCCCCAACACTGTGATGAGAGCATCCAGATGTTGCCATGAGAAACCGGAAGGCAGATCTTCACAGAAGCCCCAAGGGCTCACTCCTGCCCAGTGTTAGGAGACAGGGTTGTTGACAGCTCCTGTCTCACTGCAGCCTCTAGCACTTGGTCAGTCACTCTCCGCCTTAGCACTTTGTTCACTGTCCTGTGTCAGAGCTCTGAGCTCGCTCTACCCTTTTCTGAAAAAGTATGTGGGCTGAAGGTGGTTTCATTTTTTGTTTTTTAATTGTATATCTTTTTGTATGAGAAAAACTATATTTTGTACTTAACCAGATATATTTTTCACCCCAGCTGGGGTTATTCTTTGTAAAAAAAAAAAAAAAAAGAAATAAAATAAAAATAAAGTTTTTTTAATGGCAAAAAAA EMBV3_17273 TGTTCAGCAAGATCTGTGTAAATGGGGACGACGCCCACCCTCTGTGGAAATGGATGAAAG Gene GeneID:286809|GPX4:NM_174770:11_cdna Constitutive 0 NULL GeneID:286809 7 GENE GPX4 PHGPx glutathione peroxidase 4 (phospholipid hydroperoxidase) EMBV3_23530 TGTGCCTCAGCCTGCGTGAGCCCCCGGCCGACCTTTGGTAACCTCCTTCACTGGGAAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39536 GATGAGGTTCTGTACAGCATTGCTGAAAAGGAACAAGCACATCATGATCGACCTGGGCAC Variant GeneID:535457|TXNL4A:NM_001076060:26_cdna 263^366 1 EMBV3_08637 GeneID:535457 24 GENE TXNL4A MGC133511 thioredoxin-like 4A EMBV3_38243 CATGCAAAACACCTTAACACGATTTATGAGGTTAATGACTACAGAGAGTGAGATCAGATT Variant GeneID:536284|ECHDC1:NM_001035415:59_cdna 448^528 2 EMBV3_10448 GeneID:536284 9 GENE ECHDC1 MGC129066 enoyl Coenzyme A hydratase domain containing 1 EMBV3_34289 GAGCCATACAGGGCACTTGAGAAGTCCTTCTTAACTTCTAGCTAACAACCACTTAGTGGG Gene GeneID:532751|PTPRD:XM_002689593:5_cdna Constitutive 2 NULL GeneID:532751 8 GENE PTPRD NULL protein tyrosine phosphatase, receptor type, D EMBV3_41332 TCATGATCTCTTCTGTGAGGACTAGAGTTGAGACTTACTAAGGGTGTCAAGTAGATGTGA Gene GeneID:508508|NAP1L5:NM_001077878:159_cdna Constitutive 1 NULL GeneID:508508 6 GENE NAP1L5 NULL nucleosome assembly protein 1-like 5 EMBV3_43293 AGTGTTGTAAAGAGTGAAGATTATGCTCTCCCGAGTTATGTGGACCGGCGTGACTACCCC Gene GeneID:281090|COX4:NM_001001439:23_cdna Constitutive 0 NULL GeneID:281090 18 GENE COX4 COX4I1 cytochrome c oxydase subunit 4 EMBV3_38606 CGACTGTGATGAGGCGTTTCAGTCTTGCCTGTCCAAGATTTGCAGAGATGTGCAGAAAAC Gene GeneID:527214|PLA2G12A:NM_001098063:53_cdna UTR3_Alt 2 NULL GeneID:527214 6 GENE PLA2G12A MGC155183 phospholipase A2, group XIIA EMBV3_26897 ACTTATCCGAAAAGCTAGAGAGGCACCATTTGTCCCCATTGGAATGGCAGGTTTTGCAGC Gene GeneID:100294863|LOC100294863:XM_002694830:722_cdna Constitutive 0 NULL GeneID:100294863 18 GENE LOC100294863 NULL similar to HIG1 domain family, member 1A EMBV3_06948 AGCTTGTTACTCTGACGGCGGTTCACAGATTTAAAGCACCACCTGCCTTCATCTCTCCTG Gene BVT0102_096675 + 0 NULL GK000005.2:71300029-71324424 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195488 TCONS_00195487 TCONS_00195484 TCONS_00195485 TCONS_00195486 1 XLOC_118064 Coding TCONS_00195487 XLOC_118064 Coding Coding PRDM4 5:71323201-71347606 = TSS145672 4205 1 TCONS_00195487_10 801 12 0.828183904277987 0.0026475303741208 0.00181264102292656 0.000619553137732213 0.000933928613720852 6.81401344580552e-08 9.4060062651318e-05 0.000722945834924508 0.00217544866722117 0.00117136706202175 0.000772878564397704 0.00028907406225292 0.000423482660844827 3.61168096146814e-05 5.29558429844225e-18 0.000425870724270609 0.00498724315190491 8.43812441116654e-05 0.00134079577437637 0.00089578957638431 0.000219494230655961 1.28026685587925e-07 0.00139236767570749 0.000830678282114162 0.00128448506739415 0.0007219153818663 0.00182145344236195 0.000685199660764081 0.000311096780070724 0.000294260400341396 0.000234484638183104 XM_002687670.3 PRDM4 PREDICTED: Bos taurus PR domain containing 4 (PRDM4), transcript 0.0 7530 100.00 0.992627824019025 NM_012406.3 PRDM4 Homo sapiens PR domain containing 4 (PRDM4), mRNA. 0.0 4846 85.65 0.998810939357907 TCONS_00195487_10 sp|Q9UKN5|PRDM4_HUMAN PRDM4_HUMAN PR domain zinc finger protein 4; 0.0 1564 97.25 0.998751560549313 0 coding 0 0 0 0 -0.154897871731793 0.184287574794431 -0.0131213369549229 0.810477394835837 GAGGGTGCGGCCGGGAGGAGATCGCGGGCTGGGTCGGGCCGGGCCGGGCGGGAAACGTTAGGCGAGCGGCCCCCGGGGCGCGGGGGTCGTGCGGGCGGGGAGGGCCCCGAGGCGAGCTCTGCCCGGATGAGGAACAAAGCGGCGGGGCAGGCGCGCGCGCCCCCCCGCGCGACCGGCAGGTCGGGCAGCCCCCCTCCCGAAGCTTCTGGAGGAAAGGCCCCGGGTGTCCCCTGGCATGCCCCATCTCGCGGCAGGGTGCGCGGCCGCCGACCCTCGGGAGAAGTTGGGCGGTCCCGGGCGGCCCCGGGGACGAGTGGCCGCGTTTGTGCAGCGGTTGTAAGCAAGATGCGGTAGCACGTGACCTTGGAACGCAAACCCTGATGCCGGTTCCCCGCCACCCGTGTGCGCTTTTCTCTGACCCTTGGCCCCCAGCAGATGCATCACAGGATGAATGAAATGAACCTGAGTCCTGTGGGGATGGAGCAGCTGACTTCATCTTCTGTGAGCAATGCCTTGCCGGTCTCAGGGAGTCACCTGGGGTTGGCTGCCTCACCCACTCACAATGCCATCCCTGCTCCAGGCCTGCCAGTGGCGATTCCAAACCTGGGTCCCTCCCTGAGCTCTCTACCTTCTGCTTTGTCTCTGATGCTCCCAATGGGTATTGGGGATCGAGGGGTGATGTGTGGGTTACCTGAAAGAAACTACACCCTACCTCCACCACCTTACCCCCACCTTGAGAGCAGTTACTTCAGAACCATTTTACCTGGCATTTTGTCTTATTTAGCTGACAGACCACCTCCTCAGTATATTCACCCTAACTCCATAAATGTTGATGGTAATACAGCATTATCTATCGCCAATAACCCTTCAGCGCTAGATCCCTATCAGTCCAATGGAAATGTTGGATTAGAACCAGGCATTGTTTCAATAGACTCTCGCTCTGTGAACACACATGGTGCCCAAAGTCTTCATCCCACTGATGGTCATGAGGTGGCCTTGGACACAACAATCACCATGGAGAACGTCTCTAGGGTCACCAGCCCGATCTCTACAGATGGAATGGCAGAAGAGCTGACGATGGATGGTGTTGCAGGCGAGCATACCCAAATCCCAAATGGCTCCAGAAGTCATGAACCTCTGTCTGTGGACTCTGTGAGCAGCAACCTTGCAGCAGAAACTGTAGGACATGGTGGTGTGATACCCATGCATGGGAACGGCCTGGAGCTCCCTGTGGTCATGGAGACAGACCACATTGCAAGTCGGGTCAACGGGATGTCTGACAGTGCCCTCAGTGACTCCATCCACACCGTGGCCATGAGCACCAACTCTGTAAGCGTGGCACTCTCTACCTCACACAACCTCGCCTCCCTAGAGTCTGTTTCCCTCCATGAAGTTGGCCTAAGCCTAGAACCTGTGGCTGTCTCCTCCATCACCCAGGAGGTTGCTATGGGGACAGGTCATGTAGATGTTTCTTCAGACAGTCTTTCTTTTGTACCGCCTTCACTGCAAATGGAAGACTCCAATTCAAACAAGGAAAATATGGCAACCTTGTTTACAATTTGGTGCACTCTCTGTGACCGAGCCTATCCCTCAGACTGCCCTGATCATGGACCGGTGACTTTTGTTCCTGACACTCCAATAGAGAGCAGAGCCAGGCTTTCTCTCCCAAAGCAGCTTGTTCTCCGCCAGTCAATTGTGGGAGCAGATGTTGGTGTGTGGACTGGAGAAACCATCCCTGTTCGGACTTGCTTCGGGCCTCTCATTGGCCAGCAAAGTCACTCCATGGAAGTAGCAGAATGGACAGACAAGGCGGTTAATCATATCTGGAAGATATACCACAATGGTGTCCTAGAATTCTGCATCATTACAACTGATGAAAATGAATGTAATTGGATGATGTTTGTGCGCAAAGCCAGGAATCGGGAAGAACAGAATTTGGTGGCTTATCCCCATGATGGAAAAATCTACTTCTGTACTTCCCAAGATATCCCTCCTGAAAATGAACTGCTTTTTTATTACAGCCGGGATTATGCTCAGCAGATTGGTGTTCCTGAACACCCAGATGTGCATCTCTGTAACTGTGGCAAGGAGTGCAGTTCCTATACTGAGTTCAAAGCCCACCTGAGCAGCCACATCCATAACCACCTTCCTAGCCACGGCCACAGCAGCAGCCATGGGCCGAGCCATAGCAAAGAGAGGAAGTGGAAGTGCTCCATGTGCCCCCAGGCTTTTATCTCTCCTTCCAAACTTCACGTCCACTTTATGGGTCACATGGGTATGAAGCCCCACAAGTGCGATTTCTGTAGCAAGGCTTTCAGTGATCCCAGCAACCTGCGGACCCATCTTAAGATACACACAGGTCAGAAGAACTACAGGTGTACTTTGTGTGACAAGTCTTTCACCCAGAAGGCTCACCTGGAATCCCACATGGTCATCCACACGGGGGAGAAGAACCTCAAGTGTGACTACTGTGACAAGTTGTTCATGCGGAGGCAAGACCTCAAGCAGCACGTGCTCATCCACACGCAAGAACGCCAGATCAAGTGTCCCAAGTGTGACAAGTTGTTCTTGAGGACAAATCACTTAAAGAAACATCTCAATTCACATGAAGGAAAACGGGATTATGTCTGTGAAAAATGTACAAAGGCTTATCTAACCAAATATCATCTCACCCGACACCTAAAAACCTGCAAAGGGCCCACCTCCAGTTCATCAGCACAGGAGGAGGAGGAGGAAGATGACTCAGAGGAGGAAGAGCTGGTGGACTCGGTGGGGACAGAGGACTGTCGCATCGGCAGTGCTGTGTATTCAGCAGATGACTCTCTCTCTGCACATAAATAGAAAGAAGCTGACTATTCTGGATGGAAAATGCAAAAGGGAAAAACACATAACCAGTTATTCACTACAGTGGTTTTTATATAAAATAGTTTGATTCCTTCCAGCCAACAGTCAAAACAGACTAAATGGGAATGGATAAAGCACTTATAGAAGAGTATCCTAATGAAAACACTTTTAAAAATATTGAGAATAGAGCACGTGTCCTCTTTTTAAGTGGTGTATGGGGAGGCAGGTGTCAGGTTTTGGGATCTGTTCTTTATTTACATGATAATCTGGGTGATAACATGCCCAACAAATCAGATTTATTTTAAATTCTTTCATTATTTCGTTTTTCTCCCAACCCATTGATTTGGTAGCAACCGTTGACTTGGTCCCTGCGTCACAGTCGTCCTGATTGTGGTTCTGGTGTTACGTTTTATGCAGACTTGTGACTTAAACACATCCCGGAATGGATTGAAACGTAACAGTGTAAGCTTGTTACTCTGACGGCGGTTCACAGATTTAAAGCACCACCTGCCTTCATCTCTCCTGGCCGCTGGGGAGTTTAGGGTAGATCTTGCTTCCCAGAATTTCACAGGTACCTAGAGGGCAGGTGAGAAAGGAACAGCCAGGCAGCAGGCACTAATGGAGAGAAGAAAAGGAGAGGCGCCTGGGCCACTGTCCAGAGTGCTTCTGTCGCGTGCTCTGATGGAAGCTGGGGTGAGAGACCTGATTGCTGTTCCTTAGAGGTCTTTGAAGGTTTCGACACATCTCTCTCTCCAGTGAAGCTTCCAGCACCCGGGCAGAGTATCTGGAGGTCTAACAAGCCAAGTAACGCCTGCTGCGTTGTCTCCTGATAGCAAGGACATGTGGACCAACTGACAGAGAGGTACCTTGGCCCATGGAAAGAAGGAGGGAGTGATCCTTTCTATCTGGCTGATTCTCTGAAAAGGATCAAGACACCGTTAAAATGTTGCCAGCTCAGAATGAGAAGACATGTTGGTGTGTTTGCAAGGTTAGGCGCTCCCAGTTGTCTGTGGTGAAGGACCTCATCAGTTAAACACTGTGGATTCCAGAGGGTTTGGAAGGTGCAGAAGGTCAAATGGTCACCACGTGGATGTATTTTCAGGGTTCCAGCTTAATTCACCTACCCATCTGATCTGTCATCTGGTTTTTCTCATGTATAGCCTGCTTTCAGCAAGAAGCAAACATCCTGAAGTCAACGGTTGATGGAACATGCTCTCCTGCTCTAAGGCACAACCTCTGGGCTGGAGTGGAGAGGACTCTGGTGGGAAGGTTTTGCTGCTAATGTATTTATGGAATGAATGTATTTCATTCAAATCTGTATTCCTCTAGGAAGGATTAAAATAAAACCTTTTTAAAAAATA EMBV3_11329 GGCCGCCTAAGACCGACCTCATCGCCTTCAGTCCTAGTGTTCCCCCAGGTTTGAATTCTG Gene GeneID:616099|LOC616099:XM_002689248:140_cdna Constitutive 0 NULL GeneID:616099 7 GENE LOC616099 NULL similar to cadherin-related neuronal receptor 11 EMBV3_18673 ACACGCTCTCATCTGGATCTCTGTATGGGACTCTCAGCTGGTCCCCTTGCATCCATTTCT Gene BVT0102_142970 + 0 NULL GK000030.2:86189861-86249591 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247490 TCONS_00247491 1 XLOC_151337 Coding TCONS_00247491 XLOC_151337 NonCoding Coding - X:86215059-86223043 - TSS185324 1316 3 TCONS_00247491_3 58 0.60790273556231 3 0.835525491669798 0.000496238901479081 0.00119816397499969 0.0014428711561842 0.00225267549070465 0.00211115632995013 1.93580729693061e-08 0.00138716592936817 0.00034366289565061 0.000860804873221023 0.000334511945894726 5.20504777841562e-06 9.23597895927488e-05 9.13772203400376e-08 0.00136899693695636 8.19942666813819e-05 0 0 0 0.00136811152624557 0.000891775566628483 0.000664009715016389 0 0 0 0.00261656177878164 0.000805118637905977 0.000936326439624392 1.45366280389755e-05 3.66025293313357e-06 4.53116681403119e-06 XR_239284.1 CCDC13 PREDICTED: Bos taurus coiled-coil domain containing 13 (CCDC13), 1e-19 102 80.73 0.0820668693009119 0 noncoding 0 0 0 0 -0.244080310212247 0.167145686626198 -0.0657658520518623 0.303219734465741 GTGGTGGTCTCCTGGTTAGAACTCCAGGCTTCCACTGCAGGGGGCACGGGTTTGATCCCTGGTTGGAGAATTATGATCCTGCATACTGTGCAGTGCAGCCAAAAAGAAAAGCGGGGGCTCCCAATCTGCAGCTGGGATAAAGACCCACTGGCCTACCGTGTGCTATGGACAAGTCTTGGTTGGTGTTTGAATAAGCCTGTCACTTAGGCCAGATTCCACCTTCCCACTTTCACCTAAGCCTTGGTCCCAACCAACCCAAATATTGCTTCTGAAGCATTCCTGAAAAGAAAACCCATGAGATTTGTACACTCTGTCTTTCTGGAACAAAGTACAGAGGCAAATCGGAAACAATTGAAGAGTTTTCAAGAGTGATGCATCATATCTACATTTACAAAGTCCTTCTCACAGTTTTATAGGGAACAGATTGGAAGAAAGCAAGAAATGGATGCAAGGGGACCAGCTGAGAGTCCCATACAGAGATCCAGATGAGAGCGTGTGGTGACCCAGATAGGGTGATAGCAGTAGGGATGGAGCAAGTTAGAGCAATGCCAGAGAGATATGGATGGGATGATTGATGGGATTTGCTTGGTGATTGATCAGATGTGGGGGCCAAAGAAGAGGAAAAGTCAGAGTTTCCAGGTTTCTAGTCACCTAGATAGACAGCAATGCCATGTGCTGGGATAGAGAGCACTGGAGAGGGGGCAGATGCAGGGTGGAAGAAAATAGTTCATTGAGTTTGATGCATGTTGATTTCAAGGTGTTTGCAAAACATCCAAACAGATTTGTGGATGTGCAGAATAAAGGATCAGATGAGAGGGCTGCCCCCTGGAGCCATGTGAGTGAATAGAATGGCCCATGGAGAGCGCCTGGAGGGAAATGAGAGGAGATGAGGACATGGCACTGAGGTACCGCAGTCTTTAAGGAATAAGGCAAGGAATAGGAGCCCACTCTCTACCTCATGGTAAACACATAATAAACATTGCCAAAGGGATGAAAGTAGACTGAGAAGAATTGGCTAGAGATAATTAACTCTCTTTGGGATGGAGAAAGAGACACACGGCTTCAGAAAGGAGGTTAAGCTTGAGCTAAATCATGAAGGATGACTAGGAATTCACCAAAAAGACAGGGGAGGGAAATTTCATTTCAAGAGGAGTAAACAGCATGTTCAGAAGTTCAAAAATAGGAAAACTCATGGTCTTTGTACCTAGATTCCTCGATTCCATTTATGTATTTTCCCTTTATGATCTGGCTGTGTATCCTTATTAAATCTTAATATCCTTAATAAATTCTGATAATAAATCTTAACCATGAGTATG TCONS_00247488 TCONS_00247489 s 5' 25200 TCONS_00247492 s 3' 24127 EMBV3_12796 AGCCGACAACACAAATTGCCTGTGAGAGTGACCAGATGTTGGATTTAACAGTTAATGGAG Gene BVV0102_177154 + 0 NULL GK000012.2:32446748-32523507 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10116 TGCCAACCCTCACTGGCCATCGGCAAAAGCCAATAATCAAACAACCAGCACACCAAGCTC Gene BVV0102_044893 - 0 NULL GK000020.2:24807047-25407683 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116582 1 XLOC_070748 NonCoding TCONS_00116582 XLOC_070748 NonCoding NonCoding - 20:25294726-25297097 - TSS87050 2371 2 TCONS_00116582_5 94 0.0425980598903416 1 0 0.000177889646388397 7.20470268782128e-05 0.000448844235297034 0.000612917445741302 0.000241548353602936 3.92254135395284e-05 0.00010084359957258 5.23867961632668e-05 0.000109816334048101 0 0 0 1.21015598342017e-06 0.000343226497971671 8.69086911583426e-05 0 0 0 0.00130353153732296 9.09924848235701e-05 3.0728634877158e-05 0 0 0 0.000260074248321802 0.000401155751548745 0.000417628236831663 0 0 0 0 noncoding 0 0 0 0 ATCATAGGTGTTCTGTGTTTGGAAAACAGCAGTCCATACACATCTGTGGGCAGGTGCAGCGCTGCACACCAGGGAGCAGTGAGCCCCCATCAGCAAGGCCACTTTCACACTCTATTCCCTTCTGAACCCTGGTCCAGATCCCAATGCCAAGTCCAAAGTGAGTCAGTGAACTGATGGGATGGACCACGTGGGAAATCTCTCTGAAAACCATCCATCTCCTGAAGGACATACACCAGGGCACAGCCTGTCTAAAGCTACACAGCTTCTGCCAAAAGATGATTTTGCCACAGCTTTTAAACATATGATGCAAGATGTGTGCTGTGAAAAGTCCCCACTTACCATTTAAGTATTTGTGTTCAGAGGGATAAAAGAAAAGAAAACAAACACATAAGACCTAACATAGGAACTGTTTACAGGCATGGTTTGGGCCAGTCTTATTCCTTTTACTACATCCCTGACTGCTTATAACTGGATCAATTACCTTAAAGGGGCTCTAAGTCAGCTTGATAATAAAAACAGCGTTATTTCCTGTAATCAATTATACACAGCAGTTATCCAGCCTCCATTTTTCTGCACCATTCATGGTACCAACTTTGTACTTTTTAGTTTTCATTTTGAGAAAATGAATTCCTATGAAATGTATACCTATTGACTTTGAGGATGCTTCTAGGAACTTGTTTAAAAATTTAAAAAAACAGAGAGATGACTATACTTGGGCTAACTTTCCAAAGAGGAGCCCAAGTCTGAGAGAGACAGAAACCCAAGTCTAATTATATCTGTGGTGCCTGGGAGACATCCCCAGCTTAGATGAGTAAATGTGAAAAGAGAAAACAATCATGAGCAATTAGCTGGCTCTTGGCTAAATGTCAGCAGTGATTCCACTGTGAATCCCCAGCCCCGCCTCCCCTCTGTCCTCAGCCACATTTCCAGTCAGGAAAGCAAAGACGGCCTCTGATTCACACTGTTTCTCTGGAATTAGGCTCAGCAGTCTTCTCTAGTGACTCCTTAAAACCTGTTCCTTCTTCTGGTCATTATTGTCTTTTCTCCCATTAAATTTTAAACCATTTTACTGGAAAACTGCTTGGCACCAAACGTCTCTTCTTTCGGTTAGGGCAGCTTCAAGTCCCCATTGGCCCATACAGAATGTCGCCGGCTGAGTGTGAGTGTGAGGGGAAGAGATTTCTTTTAAAACACTCCAGATTTCTACTGCAAATAGGAACCAGCAGAGTTCTTCCCAAGCCCATCACATCTGCTGATGATCCTGTCAGAATGGGCCAATGGGACGATCCTGTTGACTTCACGAGGGATTCCAACTCTGCTGGGCTGGAGCCCCAGGCGGAGAAAGAACCACAGCAGTGGGGGAGCTTGGTGTGCTGGTTGTTTGATTATTGGCTTTTGCCGATGGCCAGTGAGGGTTGGCAGCCCTGAGAGTTACTCTGAGGAACTCTGAGCCTCGAGCTGCGGCCCCAGTGGAGTCTCTCCTGTGGTCGCCATCTTGGCCCCAAAGTAGGACATTTTGCATGCTGAGAATAAACCTGTCTTCCCATCCCCTTTCTCTGGTTGGTGAGCGGGGGTGGACAGGACACATATATTGCAACTACTTCCTCTCTCACCTTCTTGAAAAGCCTCTTCAAGACTCAGGCTTGGTCTATTTTCTAGAAGCTTCCTGGGGCTGGACTTCGCTTCGCAGAGGTGAGACCTGCAGTTCCGGGTGAGAAATGTCAGGCAGGGATCAGGAAGGTGTCTTCAGAGCCCACTGAGGCCTCCTCCTAACTGTGCTGTCAAGTCTAGACAAGCTTCTTCAGCAACTGGGTGGACTCATCTCCAGCTCCAGGCCTCCTTTGTCTATGTCTCAACTGCTTAGAACTTGGCATGGAAAAGAAGGGGTGTAAGTAAGTAATGGCCACTCGCACACTCCAGCATTGGCCTCAGGAGTGAGAAGAAGAGGAGCTAGGGGAATCCTATGGAAATTCCCTGCAGAGACCAGTAGCACCTAAGAGACCTTGAAGTGATGTGGGAAACCGAGCGGATGACAAGCGTTAGGACCAAGAAAGGGACACCAAAGGATACCAGAAAGTCAACTCAGATTTTCTCTTAGGGAATTCCACTCAAAGAGTGAAGCCGAAAAACCTTGACCAAGAAGCTGTGACCAGGCCTTCTTGGAGTATTTAAAAGAATGGTGTTTTTCCAGATTTGTTTCACAGCAAAGGTTGGGAAGAACCTCAGTCAGTGCACCCTCGAGTCATCATTAGAGATTTCTTAGGAGGTCCTTGAGGTAGAATTTGTAATTTAAAGTCTTCTTAATGTAAAAGATTACATCTGTTGGAGAAGGAAGAGAATTGGGTGGCAAGTGGGGGCAGGGAGCACTCAT TCONS_00113601 TCONS_00113603 TCONS_00113604 TCONS_00113605 TCONS_00113607 TCONS_00113608 TCONS_00113609 TCONS_00113610 TCONS_00113611 TCONS_00113612 TCONS_00113613 TCONS_00113614 . 3' 45497 TCONS_00113601 TCONS_00113603 TCONS_00113604 TCONS_00113605 TCONS_00113607 TCONS_00113608 TCONS_00113609 TCONS_00113610 TCONS_00113611 TCONS_00113612 TCONS_00113613 TCONS_00113614 . 3' 47867 EMBV3_41969 TCTGTATCTCAACCACAGATGAGAGGGGGCTGGATCTCGGAGGTGGAAATGGTGAGAGCT Gene GeneID:533130|PHLPP2:XM_002694845:764_cdna Constitutive 0 NULL GeneID:533130 18 GENE PHLPP2 PHLPPL PH domain and leucine rich repeat protein phosphatase 2 EMBV3_43517 AAGCACTCATTGCCAAGTTCTTGATCCACTTATGTCCCAGGGGAGCTTTCTTTGGCGTGG Gene GeneID:782050|RNF219:NM_001105458:7_cdna UTR3_Alt 2 NULL GeneID:782050 12 GENE RNF219 H12C13ORF7 ring finger protein 219 EMBV3_19293 GGAGACCTAAATCGGAGTCCATACCAAGCTTCCAGAAGTGGTGGATTCATCTGTACCCAG Gene GeneID:525117|DNASE2B:NM_001075865:53_cdna Constitutive 0 NULL GeneID:525117 3 GENE DNASE2B MGC140503 deoxyribonuclease II beta EMBV3_01948 CACTTTGACCTGCCTAAGCCCTGAATCTGAAAGGCTGAATTCCGAGAAGTGGGTGGACAA Gene BVT0102_336361 + 0 NULL GK000016.2:75417468-75421210 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068301 TCONS_00068302 TCONS_00068306 TCONS_00070242 TCONS_00070245 TCONS_00068299 TCONS_00068303 TCONS_00068304 TCONS_00068305 TCONS_00068298 TCONS_00070246 TCONS_00070244 TCONS_00068307 TCONS_00068297 2 XLOC_041637 XLOC_042164 Coding TCONS_00068307 XLOC_041637 Coding Coding IRF6 16:75414311-75421004 j TSS51157 4807 1 TCONS_00068307_3 227 0.178489702517162 4 0.282277346084877 3.59847769662244e-09 9.85959664387108e-09 2.15244789456807e-08 0.000107193740793686 0.000677740838066856 0.000742077704238911 0.00106701219730192 0.00224315809978665 0.00113203304615017 0.000102211807779155 1.53847791276879e-63 0.000155167264465432 3.06385527565635e-22 0.000542411470176973 0.000585835672843173 0.00746426923659869 0.00154772295419283 0.00153335077937687 0.0013934638413961 0.000374549004094051 0.00182879462629358 0.00218778370283522 0.000517939327715326 0.0030953541281413 0.00032507052165489 0.00153830000467547 0.000228813742548156 4.68861750457906e-05 7.32948598958776e-05 0.0002295082610374 XM_005217389.1 IRF6 PREDICTED: Bos taurus interferon regulatory factor 6 (IRF6), 0.0 2232 100.00 0.257125026003745 XM_005273118.1 IRF6 PREDICTED: Homo sapiens interferon regulatory factor 6 (IRF6), 0.0 1773 86.82 0.305179945912211 TCONS_00068307_3 sp|Q08DD6|IRF6_BOVIN IRF6_BOVIN Interferon regulatory factor 6; 3e-164 467 100.00 0.995594713656388 1 coding 0 0 0 0 -1.36629102680617 0.00122618507276684 0.0348174828003004 0.462486821681443 ACTACCATTTTGTCCAAGAGGCTGATAGCTTTGTGACTGACCTGGACATCAAGTTTCAGTACCGTGGGAAGGAATATGGGCAGACCATGACCGTGAGCAACCCCCAAGGCTGCCGGCTCTTCTATGGGGACCTGGGTCCCATGCCTGACCAGGAGGAGCTCTTTGGTCCCGTCAGCCTGGAGCAGGTCAAGTTCCCGGGGCCAGAGCACATCACCAATGAGAAGCAGAAGCTGTTCACCAGCAAGCTGCTAGACGTCATGGATAGAGGACTGATCCTGGAGGTCAGCGGGCACGCCATCTACGCCATCAGGCTGTGCCAGTGCAAGGTGTACTGGTCTGGGCCATGTGCCCCATCACTTGTTGCCCCCAACCTGATTGAGAGACAAAAGAAGGTCAAACTGTTTTGTCTGGAAACGTTCCTGAGTGATCTCATTGCCCACCAGAAAGGACAGATAGAGAAGCAGCCACCATTTGAAATCTACTTATGCTTCGGGGAAGAATGGCCAGATGGGAAACCCCAGGAAAGGAAACTCATCTTGGTTCAGGTCATTCCGGTGGTGGCTCGGATGATCTATGAGATGTTTTCTGGTGACTTCACACGATCCTTTGACAGTGGCAGTGTCCGCCTGCAGATCTCAACTCCAGACATCAAGGATAACATCGTTGCTCAGCTGAAGCAGCTGTACCGCATCCTGCAAACCCAGGAAAGCTGGCAGCCTATGCAGCCCGCCCCCAGCATGCAATTGCCCACTACCCTGCCAGCCCAGTAATCATGAATGCCTTTTTTTTACAATATTGTACATATGAATATTTTTTATTTTTCAGATTTAACCAGCTTTCAAGCCTTTCTTCTTTCTAACAGCATTAGTAGTCTCTGACTCTCCAAGTATGTCTAGCTTTTAAAGTTGATTTAATTTATAAAAAAAATCACCCTTCATACTTTCCTCTTCTTCTTTAAACCTCCCAGTATAATGTAGTATCAATAGAAGGAGATTTAGCCTGGAGTCTGGACAACAGGGTTCTAACTGCAGCTTTGCTTCCAGGGGGGTGACCTTGAACCAAGTCATTTAACCTCTGGGCTTCATATTCGTTACTGTAAAGTGAAGGAGTTAGAATGATGCCTGAAATAATGCCAGCTTTAAGACTCTGACTTGATGACTTCATTCTATTTGTACAAGGCAAAACTGCCTAGAACAGAACCCTTCTGCCTTGTTCTTGCGCCATTTTTTTTTTTTTTTTTTGCTTTCATTAAAGTCCCCTGAAGCACTGATTTGTCCAGGATTGATCTCCGTTTGACCTGTTATGCTAGTATAGTAGGCTGGTTCCCTGATGGGGGAAGAAAGAGGGAGGGGTGCCAGCTGGTTGCTTAGGAACTAAGCTTGATATCTAAATAGAAATAGGTGCCAAAGTCTGAAAGTCACCCAGCTTGTGGAGTAAAAGCTCACAAATTGAGCTTCTAAAAGGAAGCTGTTGACATAGAAAAAGGTTAGGGATTCTGTGGTCAGGTGTTCAACTTGCTACCACATACAGGCATACCTCGGCGGTATTGCCAGGCTAGTTCCAAACCACCACAATAAGGTGAATATTGCCGTAAAGCAAGTCGTACAGATCTTTTGGTTTCCCAAGGCATATAAAAGTTATGTTTACATTATGGCGTAGTCTAAGTGTGCAATAGCAGTATATCTAAAAATACAAATGTGCGTACCTTAACTAAAAAATGGTAACCATCATCTGAGTCTTCAATGAGTCATAAAGTTTTTGCAAGCGTTACATCAAAGATCACTTATCACAGATCACCATAACAAAAAAAGAAGTTAAAGTATTGTGAGAATTACCAAAATGTCACACATAGACATGAAGTGAGCGAATACTGTTGGAAAATGGTGCCACTAGTCTTGTTTGATGCAGGGTTGCCACAAACCTTTGATTTGTAAAACACAGTATCTGCAAAGTGCAATAAAGCAAAGCACAATAATAAAATGAGGTATGTCTGTACCACTCTGTGTGTGAGAGAGAGATGAGAGTCTATGACTCAGTGAGAGCCTTCAGAGAGGATAAAGCTCCCTTGTTCTTCTTTCCCTTCTTTGAGGAAGACTTGACACTGAGCTGGGCCCACAGGACAAACGCCTCTGACTACAGAAGAGACAAGGACAGTTCGTCTGTGCATGGAGGTGTTTTCCTCTCATTTGGATTTTTTGTAGTTGGGAAAAACAGGGTGTTGAATATGTTAAGGGCAGGGTGAAGAAGGCCTGGGCAGTGCTTTTCTGGAAAAAACGCATGTAGTACAAACCTGCACGTTTCCCTCCTGGGTGGAGGTAGGTGGGTTTGAACAATTAAGGTGAAGAGTGGTGCAGAACACTGCAGCCATGGCTACCACAAACTGGTATTCGCTTTCACTTTGCCCTTGACCCTTTTACTCTTTTTACGGTGAAATTCTACATAATTTAAACTCCACGCCCCAAATGGAAAACAAGATGCTAGTCTCTGGTTGCAGGCCCCAATCCTCCTGAATACTGAAACCTATTGTGGGCCATATCGTATTAAGAAAGTCCACATCTGCTCTGCTATCCTTAAAGCCACCTCCTACTTGCTACTGAAGTTGAGCTAGCTAAAAAGTTGGGCTACCTTTATTTCAAAAACCATAAGCTCCCCTCAATTACAAGTAGCAATGGTACTTGTTTATTCGGAATGCTTAAGCTGTGGTTTTCGGGTCTCTAAGGGACCTAGTCGATCTACTGTTACTAAAGTATGACCAAGAGAAATCTGAGTGCTCAATTGAGAGCAGAAGTTGGGTTTCTAGAGACCAGGAAATATGCAAGGTATAGAAACTTTATACTTTGGGAGCATTTGAGTGGGTGAAGTGAGGGATTTGGAATTGACATCTGGCTGCCTCTGTGTCTGTATAGTTCAAAGTTTAAAAAAAAAAAAAATCCACAGTAAATACATTGGGAGGACAACTGTTGGATCTGGGCCAGGCCCGTCCCCTTTTTCTACGTGATGCTAACAGGCTGCCCATCTGGATGAGGGCCCAGAAAATGTGAGCTGGCAAAGGGTGTAGAGCATAGTGTTTAGGTGCCAAGAAAGACTGAACTTTTAGTATGTAATGAACAGCTTATGAATATGTCAGAGGAATGAATGAGTGGTTTTATGAGGCCTTAACCCAATAGCAGAGTTTGTTGTTTATCCTTTGCAGAACACTGGGAGAGTGCGTGCAGGGCTCTCCACTGGTCTCGCTCACGGTTCCTTCTCTGGTCCTGCTGCCAGGTGTCCTTTCTTGGAAACTGAGTCTGCTCTCTCTTCGGTTGTTCCACCTCAGCCTCCCTGGGTGTTTTCTGCTTCCGCGCCTTCAGGCGGTGTCACCAGCGTTTGGTTTTCTTCACTGTCTACCCTTCTCCCCATTGGGTTGGTCACAGTCTGGATCTGCACGTCCTGTTCAAAAGCAGACTTTGGAACCGCCTGCATGTGGTTTGGGACACAAACCACATTATATTGATAAGCGAAACAAAAAAGAACATTTCTTCCCTCCCAACCTTGAGGTGAAATGGCGCATGAAAACTTGTCATGGTGTCTCACTGGGGACAAAAAAACCCAAAACTAGTTGTAGGTATAAATGAGAGGGCAAATGCTGGATCTGGGCTGGTCCCTTGTCATATAATTAGGTCCCTGGCTATATGTCCCCAGAGCACCCTACACTTATCTTTCAGAATAATCAATTCCCTAGTAATTGCTCAGTATCTGTGTCCTGCATGACTGCAAACTTGCTGGAGGTAAGGACTGTGTGTCTTGGACTGTGCTGCCAGCCCCAGCACAGTACCTGGTACATAGAATGTTCTCAAATATTTCTTGTCAGAATAAATGAATGAACTAAATAAGTCTTTCCTTTGAGAGACTGACTGCTAACTACTACGGGAAAATAAACCCAGCGAGGGAAAAAATTCTAAAATTAGTTTCTACTCTGATTCCCTCTGAGCTAAGAACATTAAAATGGAAGCCCTATAAGCCGGTCCTCCTTCCAAGTTGGCCACGCCTCCACTCCACAGTGGTCTCTCTTCACAGTCTGAAGACCTAAGGTACAGCCAGGAGTGAAACTTCCAGGGTAGGTGCCCGCAGTTCCCCTTAGCCTCTACTCTGCTCATGTATCAACAAGTTTGGGCCATTTCTTTAGATGTGAATTTCTCCCAAGAAATTATTCCCCTTCGTGGTATGGGTCATATCGCTGGTAAACCTTTCAGTGAAATAACGTTTTCTTCTTAATGACCTGATTGAAAAGCTTCTCCATCTCTGACTCCCATTTCTCATGTGAAGTCAGCAAACTGAATTCCTACAGCCTGGGCTCCACGAAGGCGGGTTTCTTGCTGTTTCCTTAGCTGCCAATACCTCCAGCGCCTAGAAGCATACATAGCACACAGCTGTTGGGAGTGAAAACACTCATGCCCTTCACGCCCTATTTAGAGATGACGAACCTTGGCCAGGACACTTGTCCACCCACTTCTCGGAATTCAGCCTTTCAGATTCAGGGCTTAGGCAGGTCAAAGTGAAAAAAAGCTTTACAGCACCACCTACAAGTGAAGATCTGTAAAGCACGTCGCTAATCTTGAGATGTTTCGTTTGGAGAGGAAAGTGAACTTCTCCAGAAACAAATCAAACGGTGTTCCGGAGCCGCGTGCTCTGCTTCTGCCCTCCGGGTCAGGTGGGACACTGGACTTAATAATACATAACGTGGGGAAGCGGCGGGACGCTAGGAGAGGCGGCGAACGACCAGCTTCAGTCGCCTGCTTTCCTCCACTCCTCCCCCTTCGGTTCCTAC EMBV3_16274 TAGTTGGACAGTTGAAACCTTCATCCTTTGACAGAAGTAAATGGGAAGGGGGTCCGTCCC Gene GeneID:508941|CYR61:NM_001034340:29_cdna Constitutive 0 NULL GeneID:508941 3 GENE CYR61 CCN1 GIG1 MGC128088 cysteine-rich, angiogenic inducer, 61 EMBV3_11188 CAGTCATGTCTGACTCCTTGTGATCCCATGGACTGCAGCACACCAGGTTTCCCTGTCCTT Gene BVV0102_407323 + 1 EMBV3_03196 GK000002.2:118879542-118886690 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242958 TCONS_00170635 TCONS_00161344 TCONS_00083942 TCONS_00110325 TCONS_00228474 TCONS_00217318 TCONS_00180133 TCONS_00116802 TCONS_00048879 TCONS_00240533 TCONS_00157319 TCONS_00153769 TCONS_00022422 TCONS_00055675 TCONS_00139450 TCONS_00012088 TCONS_00249092 18 XLOC_149621 XLOC_103620 XLOC_098235 XLOC_051409 XLOC_066229 XLOC_138502 XLOC_131481 XLOC_109903 XLOC_070968 XLOC_029010 XLOC_147197 XLOC_095776 XLOC_093531 XLOC_013092 XLOC_033483 XLOC_084898 XLOC_007638 XLOC_152035 Coding TCONS_00055675 XLOC_033483 NonCoding NonCoding - 14:30385036-30385201 - TSS41352 165 0.606060606060606 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00347845198529479 0 0 0 0 0 0 0 0 0 0 NM_001076356.1 NIPSNAP1 Bos taurus nipsnap homolog 1 (C. elegans) (NIPSNAP1), mRNA. 3e-29 131 89.90 0.593939393939394 0 noncoding AGTAAGCTCCGGGAGTTGGTGATGGACAACTCACGAACAGGGAAGTTGGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCCATGGGGTTGCAAAGAGTCAGACATGACTGAGTGAACTGAACTTAACTGAACTGAAGATTTCTGGTCCAAAGTATACAGTTGAT TCONS_00051612 . 5' 249443 TCONS_00051612 . 5' 249443 EMBV3_10694 CATTCCCGTTGTTTTATGAGTTAGACTAGCTGTACATGTCGGTCAGTCCCCAAAGCAGCC Gene GeneID:517077|SLC4A10:NM_001038128:88_cdna Constitutive 0 NULL GeneID:517077 2 GENE SLC4A10 MGC128526 solute carrier family 4, sodium bicarbonate transporter, member 10 EMBV3_39778 TCCAGGAAGGACATAGACATACCCTTTCTTGTTTGAATGATTCCAGTGTGGAGTTCACGG Gene BVV0102_278820 + 1 EMBV3_07574 GK000014.2:64034796-64169831 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43674 GTGACATGAATCAGATAGTTGATGAAATTGCCTGTGCCCTGCTGCCGATCATCCAGGGTG Gene GeneID:617347|OLAH:XM_002692079:213_cdna Constitutive 0 NULL GeneID:617347 13 GENE OLAH NULL oleoyl-ACP hydrolase EMBV3_42011 ACATGAAGGGATACATCAACCAGCTCTACCAGATCAAGCAGGCTCACAACCCGGAGACCA Gene BVT0102_213359 - 1 EMBV3_03190 GK000010.2:6935038-7013624 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012419 1 XLOC_007863 Coding TCONS_00012419 XLOC_007863 Coding Coding - 10:6955737-7008763 - TSS9430 1298 2 TCONS_00012419_3 101 0.187981510015408 6 0.975634134842056 0.000254345247309795 1.25930040968507e-10 5.09043269006898e-11 7.7969420164303e-11 4.91132723628721e-11 2.50942996382988e-05 6.7610164014687e-11 4.04871567701338e-11 9.78088982269026e-11 0.000174342902845358 7.05448874286278e-06 0.000289250227351201 0 0 0 2.47802369645564e-10 0 4.8326239771419e-06 4.42670392061779e-11 0.000406019988150547 2.13800194192629e-11 0 0 1.29157504178281e-05 5.33780065927692e-06 6.43272115818328e-11 0.000117195045173565 9.61998051147092e-05 2.99198928496867e-05 3.78042734272226e-11 XM_005193560.1 ANKDD1B PREDICTED: Bos taurus ankyrin repeat and death domain containing 1B (ANKDD1B), mRNA. 5e-107 392 100.00 0.166409861325116 NM_001276713.1 ANKDD1B Homo sapiens ankyrin repeat and death domain containing 1B (ANKDD1B), mRNA. 2e-36 158 79.13 0.152542372881356 TCONS_00012419_3 sp|A6NHY2|AKD1B_HUMAN AKD1B_HUMAN Ankyrin repeat and death domain-containing protein 1B; 4e-10 57.4 60.00 0.495049504950495 0 coding 0 0 0 0 0.0967992358821006 0.442600577030085 0.0121352092823628 0.87955750399669 CTTTATTTATATTTGAGGAAGTCAAGGCCAGAGGGATGTAACACGAGAAGGACTGAGCACCCCATTGCTGACTTTGAAGATCAATATCAGTGCTTTGCAGACAGCAACTCGGAATGGCCATGCATCATTGGTCAGCTTTCTTCTCAATGAGAACGTTGATCTGCACCAGAAGATGGAAAGGCTTGCAGACTCCTTTGCATGTAGCTGCTGATTTTGGAAACATGGAACTTGAAACCGTGCTGAAGGCTGGCTATAACTTGAAGATTGTTTACAAGAGAGTCTTCAATGGAGAATGAAGTTCGACAGGCACAGTGAAGAGGAGGTCCCATTTGAAATCCAGATGCCCACCCCACAGAGGGCACTGCCTTGTGGTCCTCTGAGAAGGGGGACAGTACAGCAATGTGTCTGGAGTCACCAGATCAGAATTCAAGCCTGGCTCTGCCACCTTCCAGTTTGGGACCTCAGACCAGGAGCAGAGCGAGAACATGAAGGGATACATCAACCAGCTCTACCAGATCAAGCAGGCTCACAACCCGGAGACCAGGCACATTCGCAGTCTGCTCTGGCACCTGGTTATGTCAGCTGAAGGCCAACGAGCGGCAGAGGCTGCCCGTTTGCAGAACTTTACGGACGCCCAGATTAGAGCCATCGAGGAGCAGTGGTCAGGTCAGCATGGTCCAGGCCATGTGGGCAAGAGGCAGTCAGTTCACTTACACCACATACAAGTACATTATGGCACTTTTATTGCTAATTCTAAGGATACATTTTCATGTGAAAAAAAAGGAAGATAATGCATTGAAAATGTTGAATATTGATTACAGTTTCTAAAAAGATTTCTTTTGTATTGTTAAGATTTCTCCTTGTTGCTAATTAGTCATATAGTGTTCTGCAAAGTCTTCAGAAAAATGGAATTGCCTTCTGGAAATTTCTCTCGACCTAAAAAATTGATTTGGAAATGCATTATGCCTTCGGAGTACTTGCTGTCAGGATAAAGGTTTTGGTGTATTGCATTTACACATGACAGGGTGCCTAGAATGCGTCTAGTGCTGTGAGGGGATCCATACGTCAGCTCTGTCAGTTGCGGTGCGTGTTTGATGGAGTTGATAATCAGGTTGGCATGACAGTATCAATGGTAACAGTCACAATCCAGTTACACTGTAGCTGGCATGAAGGAAGTGGTGGTGGTGGCTTAGTTGTTCAGTCATGTCTGACTCTTGTGACCCCATGGACTGTAGCCTCTGTCCGTGGGATTTCCCAGGCAAGCCTACTGGAGTGGGTTGCCATTTCTTTCTCCAGGA TCONS_00015803 TCONS_00015804 TCONS_00015805 TCONS_00015806 TCONS_00015807 TCONS_00015808 TCONS_00015809 TCONS_00015810 TCONS_00015811 TCONS_00015812 TCONS_00015813 TCONS_00015814 TCONS_00015815 TCONS_00015816 TCONS_00015817 TCONS_00015818 TCONS_00015819 TCONS_00015820 TCONS_00015821 TCONS_00015822 TCONS_00015823 TCONS_00015824 TCONS_00015825 r 3' 2700 TCONS_00012413 TCONS_00012412 TCONS_00012414 TCONS_00012415 TCONS_00012416 TCONS_00012417 s 3' 20701 EMBV3_33468 CGGACACGCTCATCAGTAGGGAGAGCTGTGAGAAAAGCGAGCCTCTCCTGATATCTCAAG Gene GeneID:100337112|LOC100337112:XM_002689256:163_cdna Constitutive 0 NULL GeneID:100337112 7 GENE LOC100337112 NULL protocadherin gamma subfamily A, 4-like EMBV3_12451 CGCACTGACAGGTAGTCCTTGCTTAGATGCTGTTGCTGAATGTTGTGCCCTCTGGGAAAT Gene GeneID:516280|RIC3:XM_002693062:368_cdna Constitutive 2 NULL GeneID:516280 15 GENE RIC3 NULL resistance to inhibitors of cholinesterase 3 homolog (C. elegans) EMBV3_12567 GTTGCTGCAGTCACCTTGGTTCGATTCCGCACAAACAACTCCATGTCCTCAGAAGAAAGG Gene GeneID:541153|DTNA:XM_002697679:174_cdna UTR3_Alt 2 NULL GeneID:541153 24 GENE DTNA NULL dystrobrevin, alpha EMBV3_16180 GCAAGCAGTAAGCCATAGTAGTTTTCCACAGACAAGACCCATGTAAGGTCTCTGCAGGGG Gene GeneID:100336714|LOC100336714:XM_002690137:15_cdna UTR3_Alt 2 NULL GeneID:100336714 9 GENE LOC100336714 NULL autophagy protein 5-like EMBV3_26014 ATGGCCCACACTGCGTGCATGCTGCGACTCTCCTTCTGTGATGGAAACATCATCAATCAC Gene GeneID:782544|LOC782544:XM_002699205:98_cdna Constitutive 0 NULL GeneID:782544 29 GENE LOC782544 NULL similar to olfactory receptor Olfr901 EMBV3_21031 ACATGTCAGCTCCTGTATGCACTGACCGCGGCTAGTGCGAATCTGGGAAGAACGAGTATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41251 GAGCCCTGATCTCACCGCTTCCTCAGGGATAGCCATCAGCCATGTCTTTCTTCTGCCTGT Gene GeneID:515177|TAZ:XM_002699714:98_cdna Constitutive 0 NULL GeneID:515177 X GENE TAZ NULL tafazzin EMBV3_03540 GGTGCAGCGGCAGGCCCAGGAGGGCAAGAAATTCAAGAACCTGGCACGCCAGCACCAGTC Variant GeneID:784089|ADSSL1:NM_001099192:345_cdna 493^600 1 EMBV3_13261 GeneID:784089 21 GENE ADSSL1 MGC143433 adenylosuccinate synthase like 1 EMBV3_21498 GGCGATGGGGAGTGACTGGATGGTGGAGCAGTCAAAGCACACAAAACGTGTATCAGTCAT Gene GeneID:100298518|LOC100298518:XR_083867:208_cdna Constitutive 0 NULL GeneID:100298518 15 PSEUDO LOC100298518 NULL hypothetical LOC100298518 EMBV3_15861 GCCTTCAAGGTCCATCCATGTTGTCACAAATGGTAATGTTCCTGGTGAATTCGAGGGTTT Gene BVV0102_195132 - 1 EMBV3_36469 GK000030.2:80637943-80774501 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244781 TCONS_00244778 TCONS_00244777 TCONS_00244775 TCONS_00244780 1 XLOC_150553 NonCoding TCONS_00244778 XLOC_150553 NonCoding NonCoding LOC100848500 X:80678630-80688185 j TSS183894 1543 4 TCONS_00244778_5 62 0.56448476992871 3 0.838810969227549 9.76678601392976e-05 0.000620018583797021 9.51006757750347e-05 0.000123878011580657 0.000174586731263218 4.35384557889384e-54 5.67040198037e-05 2.49161705749569e-05 1.90109785642972e-05 0.000156438206125156 3.76941116606196e-18 1.98160378808252e-140 6.88500485009836e-48 0 1.45922501931265e-46 0 0 0.000635948660412789 0.000575315244260342 2.22115172148752e-05 9.83704106757501e-05 0 0 4.3459919344272e-05 0.000206381227432982 4.05157201799662e-05 1.29355519996714e-05 0 2.40624131322947e-97 0 XM_005202454.1 UPP2 PREDICTED: Bos taurus uridine phosphorylase 2 (UPP2), transcript 1e-20 105 69.53 0.2099805573558 XM_005264867.1 METTL6 PREDICTED: Homo sapiens methyltransferase like 6 (METTL6), 4e-15 87.8 72.12 0.106286454957874 0 noncoding CTCTCTTTCCTATCTGAATTAATTTTGTGGATAGTTTCTTATGTTCCCTGGGGTGGCGAACATTTCCGGGAGGATTGAGAGCGAGCATGGGGATGGCGTTAGTTTTCAGACCCATTCTAAGAGTCATCGAGAAGAGTAACGCGAAGATGGACGCGTATCAGTGGCGTGTGGACATGCGCATCAGCGCTGTACGGACTTGCCAAGTCAGCTGTGTGCCCTAGACCTTCAAGCTATTTAGTGGCAAGTTTCTGCTGGCCCTTTAGTTTGTGGATCGGGGCTTGAGTGTTTGAGGGAGAGAAAGAGAAAGCCAAGTAGCCCCGGAGCCCCTTTTAAGAGGGCGTCATTCACCCAGCTATCCGTGCGTCCGTTCATTCATAAAGCAAATATTCACTGAGCACCAGTTACGTACCAGACACAGTTTTAGACTCTGGGGATCCAAGACACTGAAGATCACAAGAGTCCTGTGCTCAGGGACCACTCCTTCTAGGGAGTGGAGACAGAACATAAATAAACTACCGAGTCGATTTCAGATAGTGATAAGTGACAGTAAAAAAATAAAACGGGGTGATATGATGGAGAGAAACGTGGTGGATATGTACCCATTTTCACTGGGTGGTCAGATTCAGCTTCTTCAAGGAGATGACAGGTGTGGTGCCTATATGGAACTCTGCTTCAGGGAGTGCTGATGGGAATCGTGATTAGAAAGCATGGTGCTGTATGGAACTCAAGGAAGAGGAAAGCTACAGGAAACTCAGACTGGCCACCGCTGAAGCTCACAGCGGTGTGGGCAGACAGAAGCATCTGTGTAAATCTCCGTATGATGCCAGGAGCTCTCAGGAGAGGCTCAGAACTACTGTAGAATGTCCAGCCTTCCTGGCAAATGGAACTCAGTGACAAGACATCAAAACCCTCAAATTCACCAGGAACATTACCATTTGTGACAACATGGATGGACCTTGAAGGCATTATGATAAGTGGAATAAGTCATACAGAGGAAGACAAATACTGTTTACTCTCACTTGTATGGGGAATTTTTTTTAGAAAAGTAAAACTCATAAAAACAGAGTGAATGAATGATGGTTGCGAGAGACTGGAAACTGGAAAAAAGGAGACATGTTGAATAAAAAGTACAAATTTTCATTTAAAATGAGTAAGTTTGGAGAATCTAATATTTAGTGTGATGACTATGACAATTCTGTGTTATATACTTGAAAGTTGTGAGGAGAGAAGATCATAAATACTCTCACCACAAAAAAATACAGTAATTATGTGAGGAGATAGATATTAACCAACTTTATCACAGTAATCATTTTGCAATACATATGGTATCAAATCATCACCTGTACACCTTAATCTTTCACAGTGTTATATGTCAGTTATATCTTAGCAAAGTTGGTAAAAAAAAAAAAAAAGTCTGTCTAGTATGTCCTATATCTGGGCTTCCTCAGGAATGATTTTGTCAATTCATTTTGTCCCTTTGAATAGGCCATGTTCTTCTGTTTCTCTGTGTGCTCTTTGATTTTTTAGTTGAAAGTTCAGTATT EMBV3_29198 GCCTATGGCTACACTGCTGTACTGAATGTCTGCATTGTCATTTGGGAAATTCTGCACCAC Gene GeneID:100336622|LOC100336622:XM_002690593:20_cdna Constitutive 0 NULL GeneID:100336622 10 GENE LOC100336622 NULL rCG36889-like EMBV3_43028 TTGTGATAATGCTGCTGATCTTGTTTGTGACATTCGTCCTCCTGTGCAGGCACCGACTGC Gene GeneID:506088|ICAM2:XM_002696071:408_cdna Constitutive 0 NULL GeneID:506088 19 GENE ICAM2 NULL intercellular adhesion molecule 2 EMBV3_11804 AAATAGTCAAGAAGCAGAAGAGGTAGCGGTGCCAGAGGATGGGGTGGTGGGAGCAGAAAC Gene GeneID:616777|LOC616777:XM_002686969:61_cdna Constitutive 0 NULL GeneID:616777 4 GENE LOC616777 NULL similar to HWKM1940 EMBV3_02197 TCCAACCCAGAGGCAAAGGCAGTTTAGTGAGAAGAGACTATTCCAGAAGAGCTGAGAGCC Gene BVT0102_277652 + 0 NULL GK000030.2:132585356-132759502 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248371 TCONS_00248372 TCONS_00248370 1 XLOC_151577 NonCoding TCONS_00248370 XLOC_151577 NonCoding NonCoding - X:132637109-132640629 - TSS185771 540 1 TCONS_00248370_1 37 3 0.847399829497016 0.00015503454204359 0.000203897050068977 3.45749015865728e-05 0.000141916448318895 2.74272193786736e-05 2.42857932208398e-05 0.000182911003637431 0.00189370810813624 1.41345282525502e-08 0 0 0 1.52859372197956e-05 4.7784622315164e-10 0 0 0 0 0.00158820864923515 0.00046911183939773 4.81877594831597e-05 0 0 0 0.000353538395593303 0.00087102116142675 0.000348303851622532 0 0 0 0 noncoding 0 0 0 0 GCTCTGTGACAAATGATTTGGTTTCTTTCCATTAACAATCATGATTTGACCTGAACTGCCTCAATTAAGGGGTTGGCGGGGGGAGCCCTTGGTTTGCTCGTTATACATGCAAGAGAGAGAGAACCGAAGGGAGACAGAGAAACAGATGAGAGAGAGCAAGATGAAACAGAAAACATGACAGGATGTTAATTTGCTGTGGCATATATGACCCAAGTCACAAGTTTGACTCTTCCAACCCAGAGGCAAAGGCAGTTTAGTGAGAAGAGACTATTCCAGAAGAGCTGAGAGCCTCCAACGCTGTCATCTGCCCTCAGAGTTAGGACTACCTAAGAACATCAGCAAAGTCTTCAAAACAGATTCTCACCAAAGGGTGCTTCCTATCCCGTGGACAGGCCTTGCAAAGCAAAGTTGGGGACATCCTTGTGAACCATGGCTCTGGCTGGAAGACTCAATGCTGGAAACTGCCTCTGGTCGCAGTGGGCTCCTCTCTCCCTCTGCTTCAGGTGGAAGTATGAATGGACCTCCTGGCTGTATTCGCAC TCONS_00245772 r 3' 163653 TCONS_00245772 r 3' 163784 EMBV3_12101 GTGAACTCCCAGGGGCCTTTGAGGCAGCAGATGAGGGAGGGAACATGGATTTTGACAATT Variant GeneID:281664|CAPNS1:NM_174261:502_cdna 625^675 2 EMBV3_08119 GeneID:281664 18 GENE CAPNS1 CAPN4 calpain, small subunit 1 EMBV3_11955 GAGGAGCTGGAGGAGGAAGACGACGAGGAGGTTTTCCAGGGCAGCCTTGTGGATTGGAAC Variant GeneID:510780|TOMM22:NM_001100335:40_cdna 119^237 1 EMBV3_31941 GeneID:510780 5 GENE TOMM22 NULL translocase of outer mitochondrial membrane 22 homolog (yeast) EMBV3_18183 CACCAGGACTGAGGACAGCTGACTCGCCTCTTTTGTCCCAGCAGTGGCCATCAGAATAAA Gene GeneID:540152|CDC42EP4:NM_001046471:14_cdna Constitutive 1 NULL GeneID:540152 19 GENE CDC42EP4 MGC138126 CDC42 effector protein (Rho GTPase binding) 4 EMBV3_26521 TGACCTGCCTCTGGAAGCTTGGCCAGCAACAGACAAGACCAAGCGGGAGGAAGTGGATTA Gene GeneID:281620|AMELX:NM_001014984:5_cdna Constitutive 0 NULL GeneID:281620 X GENE AMELX AMLX amelogenin (amelogenesis imperfecta 1, X-linked) EMBV3_32542 AAGGTAACTTCTGGGAAAGTGGGAAAGGAGGACCGGAAAGGGGCATCCCAGGAAAAGAAA Gene GeneID:505551|MYCBPAP:XM_002695937:354_cdna Constitutive 0 NULL GeneID:505551 19 GENE MYCBPAP NULL MYCBP associated protein EMBV3_19932 GTCGGACCAGCATGGCAGGATTCAAGCGAGGGTGAAAAAGTGGCAGTAAAAGTTATTGAC Variant GeneID:536909|SNRK:XM_002696930:476_cdna 219^313 2 EMBV3_14038 GeneID:536909 22 GENE SNRK NULL SNF related kinase EMBV3_31491 AGTAAGAAGCTGCTGCTTGCAAGGGGCAGTAGCAGCAATGGGACTGGCCAGGACGCCTCT Gene GeneID:515433|GCGR:XM_002696114:205_cdna Constitutive 0 NULL GeneID:515433 19 GENE GCGR NULL glucagon receptor EMBV3_36607 AACAGCCTTCCACAGGAGGGAGACGTGGTGTTGATGACAGTGCAATTTTGGATTGCCAGT Variant GeneID:615298|CLLD6:NM_001038206:205_cdna 621^723 1 EMBV3_21850 GeneID:615298 12 GENE CLLD6 MGC134367 chronic lymphocytic leukemia deletion region gene 6 protein homolog EMBV3_42912 TGAGAAGTCAGGGAAACTGGAGGTGGGAGGGGCCTCTCGGCACTCCACTGGGTTTGGTGC Gene BVT0102_163647 - 1 EMBV3_09043 GK000020.2:14746317-14836399 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063808 TCONS_00149038 TCONS_00063810 TCONS_00162571 TCONS_00200854 TCONS_00186491 TCONS_00162302 TCONS_00218950 TCONS_00217533 TCONS_00131534 TCONS_00189709 TCONS_00063805 TCONS_00240372 TCONS_00210949 TCONS_00255144 TCONS_00063807 TCONS_00098199 TCONS_00240374 TCONS_00147823 TCONS_00033204 TCONS_00116087 TCONS_00131535 TCONS_00222181 TCONS_00149042 TCONS_00111145 TCONS_00222116 TCONS_00131533 TCONS_00063813 TCONS_00106013 TCONS_00186557 TCONS_00233458 TCONS_00054136 TCONS_00129560 TCONS_00186834 TCONS_00012043 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00131531 TCONS_00230828 TCONS_00178734 41 XLOC_038534 XLOC_090915 XLOC_038536 XLOC_099452 XLOC_122505 XLOC_112543 XLOC_099184 XLOC_132269 XLOC_131531 XLOC_080239 XLOC_115747 XLOC_038531 XLOC_147036 XLOC_129459 XLOC_158076 XLOC_038533 XLOC_058445 XLOC_147038 XLOC_089710 XLOC_019438 XLOC_070256 XLOC_080240 XLOC_135490 XLOC_090919 XLOC_067045 XLOC_135425 XLOC_080238 XLOC_038539 XLOC_062697 XLOC_112609 XLOC_142940 XLOC_031945 XLOC_078273 XLOC_112885 XLOC_007593 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_080236 XLOC_140318 XLOC_108507 Coding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_12182 GGACATGACTGAGCGACTGAACAACAGCAAGGAATGGAGCCTAACACAAAAATGGTTCAG Gene BVT0102_084784 + 1 EMBV3_20447 GK000012.2:83277102-84265637 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041283 1 XLOC_025090 NonCoding TCONS_00041283 XLOC_025090 NonCoding NonCoding - 12:83564592-83565606 - TSS30784 1014 1 TCONS_00041283_1 55 0.319526627218935 1 0 0 0 0 0 0 0 0 0 0 0 3.61212604307163e-05 0 0 0 0 0 0 0 0 0 0 0 9.04739016762433e-06 0.000429863523526626 0 0 0 0 0 0 XM_005198818.1 ANKLE1 PREDICTED: Bos taurus ankyrin repeat and LEM domain containing 1 (ANKLE1), transcript variant X1, mRNA. 7e-73 279 86.70 0.226824457593688 0 noncoding 0 0 0 0 -0.173170239470036 0.414487340324274 0.0226274080015727 0.622234187141862 TTGAGCAAGCTCTGGGAGACGGTTTAGGACAGGGAAGTCTGGTGTGCTATGGTACATGGGGTCGCAGAGTTGGACATGACTGAGCGACTGAACAACAGCAAGGAATGGAGCCTAACACAAAAATGGTTCAGTAGGGAGTAGTTGGAACCTGGCATCAAATAGGTCTTGTTCTCCTTTTTCAAATTATAGACACTTTTCTTCATTTACACCAGTGGTCCCTAAGATTTTTGGCACCAGGGTCCAGTTTAATGGAAGACAATTTTTCAACAGACTGGGAGGTGGGGGTGGTTTAAGGATGATTCAAGTGCATTAAATTTATTGTACAATTTATTTCTATTATTATTACATCAGTTGCACCTGAGATCATCAGGCATTAGATCCCCAAGGCTAGGGCCCCTGATTTACGCATTAGATTACTCTGTGTCAGTGGTAGAAATTTCAGTTTAAATGACTTAAGAAAGAAGAAGGGACAGTGAAAGATAAAGTGGCATAAGAAAAAAAGGGCTCTATCTGCCCACCAAAGCATCAACACCGATTTTCTACCTTTTCATTTGAAACCTGTAGAAATCTTTTCCTCCTTCACAGTTAAAATATCATTTAGATGAGCTCCAATACTTTGGCCACCTGATGTGAAGAGCCAACACATTGGAAAAGACCCCGATGCTGGGAAAGTTTGAAGGCAAGAGAAGGGGACCACAGAGTAAGAGATGGTTGGATGGCATCACTGACTCAATGGACATGAGTTCGAGCAAGCTCCAGGAGATGGTGAAGGACAGGGAAGCCTGGCATGCTGCAGCCCATGGCATCACAGAATTGGACACCACTTAGTGACTGAACAACAAAAGACGTATTAGCCATGTATGAGCCAAAGTTTCATTTAATTCATATTTTATTTTTGTACCTACCTCCTCTATCCCAGGAACTTTTTAATTATTTTAATTATGAATAAGACAGCAAATCCATGTTCAAACAGGTTTTTTTTTTTTACTAAGGAAGCAAACTACTACTGGATTT TCONS_00037453 TCONS_00037454 . 5' 287492 TCONS_00037453 TCONS_00037454 . 5' 287492 EMBV3_36295 GGCCAATGAACTTTGATGATAGCAACGCTCGGAAGGACTGGGGATGGAAGCACGATTTTG Gene GeneID:511957|TDH:NM_001046104:11_cdna Constitutive 0 NULL GeneID:511957 8 GENE TDH MGC137443 L-threonine dehydrogenase EMBV3_35744 TGTATCCTGGAGAAAACACACAGCAATGGAGCCATACTTCCCAGACTCAGTGGTTGTGGC Gene GeneID:506495|ZNF93:XM_002695283:61_cdna Constitutive 0 NULL GeneID:506495 18 GENE ZNF93 NULL zinc finger protein 93 EMBV3_43120 CTGTTGCACCTTGAGCGGGTTACCTAACCTCTCTGTGCTTCAGGTTCCTCACCTATGAAA Gene BVT0102_020943 + 0 NULL GK000005.2:114343799-114357558 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22653 TGAATGGGCGGGCCGGTCCCTGCATCTGAGGCTGTGCATCTCTGGCTCTCAGATAGTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39939 ACTCGGAGAGCAACAAGGGCAAGAAGCGGCGGAACAGAACCACCTTCACCAGCTACCAGT Gene GeneID:594846|ALX4:NM_001030304:99_cdna Constitutive 0 NULL GeneID:594846 15 GENE ALX4 NULL ALX homeobox 4 EMBV3_06371 TGTCCCAGGAGGACAGAGTTTGCATTGATGAAAACCCTCCCCAGCCCTTTGATGCCTCGT Gene GeneID:618319|LOC618319:XM_002686558:47_cdna Constitutive 0 NULL GeneID:618319 3 GENE LOC618319 NULL similar to ASCL830 EMBV3_35127 AGCTGTTGAAAAGATGCTCTCTGCTCGTGCCTCAAACTCCTCTTGGGCTCTACAGCAACA Gene GeneID:540802|ASB3:NM_001076927:167_cdna UTR3_Alt 4 NULL GeneID:540802 11 GENE ASB3 MGC142427 ankyrin repeat and SOCS box-containing 3 EMBV3_30022 GGTAGAGCCATTCCTCTGGCTTCCAATCTGGTTTTCCTCCTTCCTCTTTGGGTTGCTCTT Gene BVT0102_059040 - 1 EMBV3_38965 GK000018.2:34910564-34912744 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25450 AGATGGGAGCCCAGTTTTACCGCCATGTGCATTTCAAGGACTTTTTGAAGCCTCACTGTG Gene GeneID:407126|CR2:XM_002693898:231_cdna Constitutive 0 NULL GeneID:407126 16 GENE CR2 cd21 complement component (3d/Epstein Barr virus) receptor 2 EMBV3_29734 GCTCTTGGGACGCCAGAAAACCCTTCTTGGCTCAGCATCCACCTCCAAGATCAAAAAGTG Gene GeneID:404182|SHBG:NM_001098858:457_cdna Constitutive 0 NULL GeneID:404182 19 GENE SHBG NULL sex hormone-binding globulin EMBV3_04439 TCCTGGAGTGAGTTACCGTACCCGAGAAGAGATTCAGGAAGTTAGAAGTAAGAGTGACCC Gene GeneID:407109|PDHA1:NM_001101046:58_cdna UTR3_Alt 2 NULL GeneID:407109 X GENE PDHA1 PDHA pyruvate dehydrogenase (lipoamide) alpha 1 EMBV3_21041 GCTTCCGCATTGCCAGCGCCTGCCTGGACGAGCCGAGCAGTGTACACAGGAAGACGTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22476 CCCACCAGGGTCTTGTGGCCTTTTTCCTCACACTGAAGAGGTCAGCAATAATCTGTCACT Gene GeneID:540348|ELOVL1:NM_001034703:272_cdna Constitutive 0 NULL GeneID:540348 3 GENE ELOVL1 MGC127241 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 EMBV3_07147 GATACCAGCAATCAGTCTTGTCATCCTTCAGGGGGAGCCCAGGTTTCTTCCATATACACC Gene GeneID:518224|CD46:XM_002694225:141_cdna Constitutive 0 NULL GeneID:518224 16 GENE CD46 NULL CD46 molecule, complement regulatory protein EMBV3_07339 TGGGGACTGTCTATGTGTCAGCTCTCAACAACAGGGAAACTGGGCCTGGGAGAGGAATAT Gene GeneID:414345|CD86:NM_001038017:26_cdna UTR3_Alt 2 NULL GeneID:414345 1 GENE CD86 NULL CD86 molecule EMBV3_33620 GGTGCTGATGGTGCAAGGAGACTAGCACGGACCCTTGATCTTGATATTCTAGGAGACATC Gene GeneID:614641|NUBPL:XM_002696701:86_cdna Constitutive 0 NULL GeneID:614641 21 GENE NUBPL NULL nucleotide binding protein-like EMBV3_27493 GTCACTGAGCTGGTAGTTTTCATCATGGCGTGCATCAACATCATTGTGCCCAGTCTCACC Gene GeneID:787455|LOC787455:XM_002707796:82_cdna Constitutive 0 NULL GeneID:787455 29 GENE LOC787455 NULL similar to olfactory receptor MOR167-3 EMBV3_19644 GCCTGCCCGCCGCCATGGCCCTGCTCCGAGAGTTCTTCAGATGCTATATACTTGGCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23267 GTTAATATGTTTTTTTTTTTTTTGGCCCCCGCAAACAAACCATACAATGACACAGAACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04300 TGGCCAGAGTCTTCTGTGGTCACGTCCTAGAGCCCATCACCTCTCTTGTCAAATGTCATG Gene BVT0102_227362 + 1 EMBV3_36746 GK000030.2:141087029-141098173 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33868 CGTGGTGTACTACGTGAGGCAGAATCAGGAGGACGCGCGGAGACACCTTGAATACTTGAA Gene GeneID:783571|LRRC3B:NM_001099395:5_cdna Constitutive 0 NULL GeneID:783571 27 GENE LRRC3B MGC165797 leucine rich repeat containing 3B EMBV3_01695 CGGGGGTGTTTTCATACAAATGTCAATTTTGAGAGAAAAGTCAAAGGTGCTTCAGCCTTG Gene GeneID:538506|LOC538506:XM_002694851:781_cdna Constitutive 2 NULL GeneID:538506 18 GENE LOC538506 NULL similar to Genetic suppressor element 1 EMBV3_17038 AACACGAAGCATCGCGAGATGACGGCGTTTTCCCGCGAAGGAGAAGCGCGCGTTTTTCTT Gene BVT0101_046775 + 0 NULL GK000026.2:15851778-15862946 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26703 GAATCCGCTGGACCCGCGGCGGCGCGGCAGGTGCCCAGGAGCTGCCCTCTGCTGCCTCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32712 AGGCCATGACAATCCTTTTCCTAACCTGCAAGAGACAGGCAACTCGTGGTTCTCAGTGCC Gene GeneID:784527|LOC784527:XM_002707906:50_cdna Constitutive 0 NULL GeneID:784527 9 GENE LOC784527 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_05401 GTGCTTTCGCCCTCACACCTGGGGGCGGGTTGGGGGTGCAGAAGTCTTTTTATCTATATA Gene GeneID:538707|TET3:XM_002691203:157_cdna Constitutive 0 NULL GeneID:538707 11 GENE TET3 NULL tet oncogene family member 3 EMBV3_29692 CCCAGTACCACAACAGAAACAGAAACAATCGCTAAATATGAAATAATGGATGGCGCACCA Gene GeneID:510574|VPS26A:NM_001075455:299_cdna UTR3_Alt 2 NULL GeneID:510574 28 GENE VPS26A MGC139062 vacuolar protein sorting 26 homolog A (S. pombe) EMBV3_26621 CACGTGCCCACCCAAGAGGAGGAGCTCGGTGACATTTGAAGATGAAGTGGAACAAATCAA Gene GeneID:768006|GPR161:NM_001077066:11_cdna Constitutive 0 NULL GeneID:768006 3 GENE GPR161 NULL G protein-coupled receptor 161 EMBV3_01122 GGTCTCGCCAACTCCAGGACAAACTCGCAAGATACTAACACTAGGGCCCCAACTTCTCAA Gene BVT0102_197477 + 0 NULL GK000029.2:50700468-50734096 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164257 1 XLOC_100176 NonCoding TCONS_00164257 XLOC_100176 NonCoding NonCoding - 29:50715632-50717129 - TSS122949 1357 1 TCONS_00164257_1 90 0.384672070744289 2 0.0942513368983957 0 0 0 0 0 0 0 0 0 5.45769499654538e-05 0 3.68899051361556e-05 0 0 0 0 1.22345521490398e-05 0.000129430052937526 0 0 0 0 3.38027350966682e-05 0.000796846370891168 0 0 0 4.24694616951303e-05 5.36618494178115e-05 0 XR_233040.1 LOC101908852 PREDICTED: Bos taurus uncharacterized LOC101908852 (LOC101908852), 4e-33 147 82.43 0.10759027266028 0 noncoding 0 0 0 0 0.159594453054454 0.331047617204235 -0.0289345619722819 0.614695797319105 TGGACACGACTTATCAATGGAACAACAGTAAGACTAAACACCAGACAAAATGCTGATGCCCTGAAGTTTTACAGCACAAATGTAAAGACATTTGATTAATATTTGCCCAGATTTGAGAGCAAACCTAAATGCTTATGTATCATGAGGCTAAAACAAACTTTCACAATCAACAAGTAAAAAAAAACCTCAAGCAGCCATGATAAAGGAAAAACTGAAGTATCTTTGTGTTCACTTTAGAAAGTAAAACTCTGAAATTGTTGTCATATGATTAAGTGATGAAGGATATGTGGCCAAAAAAAGAAGAAAGAAAAACCATTGTGGAGGATGCCCTGGGGTAGAGAAGAGGGGTTGGGGCAACTCATTCAACAAAATAAGATTATTTTCCCTGCGTCTGTGCTCCGTAACGTCTGCCTGTCTGTGAACCTAGCTAGGCTCCTCTGGCCGTGGGATTTCCGAGCAAGAATACTGGAGCCGGTCGCGACTTCCTCCTCCAGGGGATCTTCCCGACCCAGGGATCAAACCTGTGTCTCCTGTGTCTCCTGCGCAGCAGGCGGACTCTTCACAGCTGAGCCATCAGACAACGTATACAGATCTTGAACTCCAGCCTTTAAGCTCGAAACGAGGCCAGTTTGGAGTCAAGCGAGTTCTGCTCCCGCACAGAAAGCGGCGGGAACCTCGGCGCCCCCTGGTGACGACCCAAGAAACCGCGCCTGGGACCCGGGGCCGCGTCGCCCGAAGCCGGGGGCGGGGCGGGTCTCGCCAACTCCAGGACAAACTCGCAAGATACTAACACTAGGGCCCCAACTTCTCAATATTTCTAGTAAGAAGCTGTCAGCACTCCACTTTGAGGTATTCCCTTCCCAGTCACACATTTTGTTTTCTCTGTTAGAGTTCTAGATATCTAGATACCAAAGAGATAGCCAGGTTTCTTGAAAGAACACTTAAGAGTCTTGGAAACAGAGACCCAGCGGTGTTGCACACGGCCTCAGGGATCCTATTCTGGCTAATAATGCCCTTAGAAGCTGCTCAAGTCCCCTCTGTGATCTGCTGACAATAAAACTAAAAGCTGAAAATGGATCAAGAACTCCACTGTGTGTTCTGCTAGAGGGTTAAGGTCAATAACACTGGTTCCAGGCAGCTCAGTGGGTAAGAATATGTCTGCCAGTGCAGGGGACACGGGTTTGAGCCCAGGTCCGTAAGTTCCACGTAAGTCAAGTCGTCAGCAAGGCCGTGCTCCCTCTGCAAGTCTGCAAGGAGAGCCCGTCTGTCATCGCCACGACCTTCTGGTGGCTGCCAGGATGCCCTGGCTTGTGGCCACCTCACTCAGACACTCAAAGCGGCACCTGCAAATCCCCTC TCONS_00164258 s 5' 459 TCONS_00164258 s 5' 1955 EMBV3_19063 CCTCCAAGATGTGCAGCAAGATGCGGCTGCTGAAAGGTCTGTGCAAGTCAATCACGAAGA Gene GeneID:100300483|LOC100300483:XM_002691364:216_cdna Constitutive 0 NULL GeneID:100300483 11 GENE LOC100300483 NULL similar to granulysin EMBV3_20355 GGCTCGTCTTAAAAAACAGCAGGAAGAATTGGAACAGATGAGACTACGTTACCTGGCCGC Gene GeneID:534400|CEP120:NM_001078000:20_cdna UTR3_Alt 2 NULL GeneID:534400 7 GENE CEP120 CCDC100 MGC142331 centrosomal protein 120kDa EMBV3_24019 GGCATAATATTCTAAAAAGACTAACCTGCCCTCCTACCCCCATACTGCTGAGAGTCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23916 TACTCCCTGGAAATGCCCATCAGGTGTGAACTGTTTGACCAGAACCTGAAGTTAGCCCTG Gene GeneID:504391|TRAPPC4:NM_001038502:74_cdna Constitutive 0 NULL GeneID:504391 15 GENE TRAPPC4 MGC134224 trafficking protein particle complex 4 EMBV3_01815 TCATCAGGGGCCATGTGCATCTCGGGACTGAAGATTGCCCAGCTGGCAGGCTGCAATCAC Variant GeneID:529706|CES8:NM_001167834:324_cdna 754^858 1 EMBV3_27357 GeneID:529706 18 GENE CES8 NULL carboxylesterase 8 (putative) EMBV3_28308 TTTACTCCGCTTCAGGCTTTGTGCCAGAACCAGAGGGGCTGATAGTGAGCGACTGGGGCA Gene GeneID:100313118|MIR2291:NR_030839:4_cdna Constitutive 0 NULL GeneID:100313118 10 GENE MIR2291 bta-mir-2291 microRNA mir-2291 EMBV3_16999 GGCCTCAGCTCTGCTGCTTGGTTAGTCTCACTCACAATACACTTTGGCTTACGTTTTCCC Gene GeneID:786696|LDOC1L:XM_002687962:68_cdna Constitutive 0 NULL GeneID:786696 5 GENE LDOC1L NULL leucine zipper, down-regulated in cancer 1-like EMBV3_40441 GGGTCCCTCCAAGTTTGATTATTTAGCCCAGTGGAGACAGGTCTGTTTTGGATTCTGGGA Gene BVT0102_244018 + 1 EMBV3_32035 GK000013.2:62054882-62068568 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049508 1 XLOC_029639 NonCoding TCONS_00049508 XLOC_029639 NonCoding NonCoding - 13:62060054-62060381 - TSS36684 327 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00338367373973132 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.174007154296763 0.165955084728078 0.0476731363189091 0.453050186587289 GGGGCAGAGTCCTGCTGTGCCCTGCCTCCTTTACCCTTCCCTTCTCCCAGCAAGAAGCGGGCTGCCTTCTTCCCAGCAATCCTGGCCTTTATTCTATGCACAATCATTGTAAGGGCACCCCCAGGCCAGGCTGAAGGGATGGGGGCCCTGGAGCACCTGCAATAATTCCAGAGTGGTGGGTAGCTTGAGACAAAGTGAGTGAGAATGGCACCAGGTAGAAAAAGGATGTTCTTCCATCTCCCTTTTCCCCCAATCCCAGAATCCAAAACAGACCTGTCTCCACTGGGCTAAATAATCAAACTTGGAGGGACCCTATCTGAACAGCCC TCONS_00043385 . 3' 5174 TCONS_00043385 . 3' 5500 EMBV3_37451 TGCGATTACCAGCAGGAACCGGCAGCAGCTGAGGCCCAGGGCGGGCTGTGGCCCAGGCCC Variant GeneID:785603|TBKBP1:XM_002695919:286_cdna 49^179 1 EMBV3_14918 GeneID:785603 19 GENE TBKBP1 NULL TBK1 binding protein 1 EMBV3_01556 CCCGAGAACACGCTGGCGGCCATTCGGCAGGCTACTGATGCTCTAAAAAAAGTATATATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12647 ATGGTCAGCTCCTGTTGTGGCTCCGTCTGCTCTGACCAGAGCTGTGGCCGAAGTCTCTGC Gene GeneID:100337239|LOC100337239:XM_002696015:439_cdna Constitutive 0 NULL GeneID:100337239 19 GENE LOC100337239 NULL keratin associated protein 4-12-like EMBV3_23860 ACAATGTCATGAACCTCTGCCCATAGTTCTTCAGGCACTCTGTTTATCAGATCTTGTCCC Gene BVV0102_048356 + 0 NULL GK000015.2:578263-636628 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022660 1 XLOC_013330 NonCoding TCONS_00022660 XLOC_013330 NonCoding NonCoding - 10:82548479-82549359 - TSS16550 880 0.996590909090909 1 0 1.93262720054111e-06 5.4238664899871e-05 0 1.5727537129713e-06 3.22600205898771e-06 0 1.12105804978696e-05 0 8.966064232461e-06 7.01334093827743e-06 5.70635235801325e-05 0 0 0 0 0.000123053842253979 0.000292950600567455 1.42561882548654e-05 0 9.08009923416796e-07 7.47433276800814e-06 1.56939735211663e-05 5.56002051537429e-05 0 3.21492891950111e-05 2.66873240242325e-06 4.06885319465172e-06 1.63724140463253e-05 8.27488142426753e-06 0.000143094604230468 NM_174654.2 SLCO1A2 Bos taurus solute carrier organic anion transporter family, member 1A2 (SLCO1A2), mRNA. 2e-155 553 90.55 0.455681818181818 0 noncoding 1 0 1 1 -2.05524142347019 0.00582106649820954 -0.203553710934697 0.0144330927950946 CTAGCGTGTGAGATGAGTGCAATTGTGCAGTAGTTTGAGCGTTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGTATATCGAGTGCAGCACTTTCACAGCATCATCTTTCAGGATTTGAAATAGCTCAACTGGAATTCCATCACTTCCACTAGCTTTGTTCGTAGTGATGCTTCCTAAGGCCCACTTGACTTCACATTCCAGGATGTCTGGCTCTAAGTGAATGATCACACCATCATCATTATCTGGGTCATGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTTTTGCCACCTCTTCTCAATATCATCTGCTTCTGTTAGGTCCATACCATTTCTGTTCTTTATTGAGCCCATCTTTGCATGAAATGTTCCCTTGGTATCTCTAATTTTCTTGAATAGATCTCTAGTCTTTCTCATTCTGTTGTATTCCTCTATTTCTTTGTACTGATCACCGAGGAAGGCTTTCTTATCTCTCCTTGCCATTCTTTGGAACTCTGCATTCAAATGGGTCTATCTTTCCTTTTCTCCTTTGCTTTTGGCTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTTCTCAGACAACCGTTTTTCTTTTTTGCATTTCTTTTTCTTGGGGATGGTCTTGATCCCTGTCTCCTGTACAATGTCATGAACCTCCGTCCATAGTTCATCAGGCACTCTGTTTATCAGATCTAGTCCCTTAAATCTATTTCTCACTTCCACTGTATAATCATAAGGGATTTGATTTAGGTCATACCTGAATGCTCTAGTGGTTTTCCCTACTTTCTTCAATTTCAGTCTGAATTTGGCAATAAGGAGTTCAT TCONS_00018100 TCONS_00018101 TCONS_00018102 . 3' 10175 TCONS_00018100 TCONS_00018101 TCONS_00018102 . 3' 11054 EMBV3_12458 GCACCAAGGCAACCCCTGTACAACATACAGACTGTCTGTGTTAATGCTGTGCTGGAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07665 GACGTCAGAAAGTGTGGGTACGTTCTTCACAGGAACTGCAGGAAAGGTTTCTATTTGCAC Gene BVV0102_039737 + 1 EMBV3_33507 GK000001.2:69724962-69732777 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001029 TCONS_00001030 TCONS_00001028 TCONS_00001027 TCONS_00001031 TCONS_00001025 1 XLOC_000241 Coding TCONS_00001030 XLOC_000241 Coding Coding LOC100847188 1:69706073-69731110 j TSS496 7746 1 TCONS_00001030_3 268 0.0147172734314485 6 0.690845182936571 0.000286177731330012 0.000475857958987186 0.000471364132910071 3.0366580040049e-05 0.000314217568264647 5.92927026645002e-05 7.56283947715712e-07 0.000123802917616711 0.000327040092813238 3.83325903133892e-05 2.62801472894399e-09 2.06500167786302e-09 8.30724608268339e-05 0.000117987430104668 4.53784112405754e-07 4.0800627002531e-164 1.24720486124009e-34 2.28086226601077e-30 0.000338370998630105 0.000495075177538169 5.84964087070892e-18 0 1.24417392942487e-39 7.34876747417704e-59 0.000714499515564508 0.000417165500702635 1.87731945821299e-05 1.99864747870318e-52 6.26725181098279e-07 5.60173913575381e-10 XM_005201451.1 LOC100847188 PREDICTED: Bos taurus kalirin-like (LOC100847188), mRNA. 0.0 4453 100.00 0.318616059901885 NM_001024660.3 KALRN Homo sapiens kalirin, RhoGEF kinase (KALRN), transcript variant 1, 0.0 3425 86.89 0.367544539116964 TCONS_00001030_3 sp|O60229|KALRN_HUMAN KALRN_HUMAN Kalirin; 0.0 568 99.63 0.996268656716418 2 coding 0 0 0 0 -0.0817957114100939 0.524060262961616 -0.00184228703620003 0.969807839343969 GCCAGGTAGCTCTAATTGTTAATAGCACTCTCTGAACCAGGTGATGAATCACACACCTGAATTGAAAGCAACGGTTTTCACCTGGAACCAGAATCCTTTGTTTTACTCTGCTCTCTGCTACTCTTATTTTCACCCTTCTCTCTTCTCTTAAAGAGACCTCTGCAGTTATAAAAATATTTGTCCACCTCTTTGTTTAGCTTTTCACTCTGTCTCTCAACTCAGCACAAAGGCATTGATGCTGAGCTGAGAGAAGTCTTTCCAAGCTTGTATTTCCCTTGGCATTCTTCAGGTCATAGTTCATCTTATGAACTAAGTTCTCTTGGGAAAGTTATCTAATCTTTCTGAGCCTCGGTTACTTTATGTGTAAAGTGAGACGAATACTCCCGATCTCACAGGGCTTCTGTGGATTTAAGTGACAACGTGGAAGGAGAGGATTACGGGTAGACTCCTTCCACAGTATCTTACAGGTTCCCAGGCCTGGCAGCAGTCAGTAGCATCGACCTTGGACACCTACCTTGTCATTGAAGACCTCAGTCCTGGGAGTCCTTATCAGTTCAGAGTCAGTGCCAGTAACCCCTGGGGGATCAGCCTGCCCAGCGAGCCCTCAGAATTCGTGCGACTTCCAGATTACGACGCTGCTGCCGATGGTGCCACCATTTCTTGGAAGGAAAATTTTGATTCAGCTTATACTGAGCTGAATGAAATTGGAAGAGGCCGGTTCTCCATAGTAAAGAAGTGCATTCACAAAGCTACTCGCAAAGATGTCGCTGTGAAATTTGTTAGCAAAAAAATGAAGAAAAAAGAGCAGGCTGCCCACGAGGCTGCCCTGCTTCAGCACCTGCAGCACCCCCAATACATCACTCTCCATGACACCTATGAGTCCCCCACTTCCTACATCCTCATTTTGGAACTGATGGACGATGGCCGACTCTTAGACTATCTTATGAATCATGATGAGCTGATGGAAGAAAAAGTAGCTTTCTACATTCGAGACATCATGGAAGCCCTGCAGTACCTTCATAACTGCAGAGTTGCACATTTGGACATAAAGCCTGAAAACCTGCTCATTGACCTACGGATTCCAGTGCCTCGAGTGAAGCTCATTGACTTGGAGGATGCTGTCCAGATCTCAGGTCACTTCCATATCCACCACCTTCTGGGGAACCCCGAGTTTGCTGCCCCAGAAGTGATCCAGGGCATCCCTGTATCCCTGGGCACCGACATCTGGAGCATCGGGGTTTTGACATACGTCATGCTGAGTGGGGTCTCCCCCTTCTTGGATGAGAGCAAGGAGGAGACATGTATCAATGTGTGCAGGGTGGACTTCAGCTTCCCCCATGAGTACTTCTGCGGTGTGAGCAATGCTGCCAGAGATTTCATCAATGTGATCCTACAGGAAGACTTTCGGAGGCGGCCCACAGCAGCCACCTGCCTGCAGCATCCGTGGCTGCAGCCCCACAATGGCAGCTACTCCAAGATCCCCCTGGACACCTCCCGCTTGGCGTGCTTCATCGAGCGCCGCAAGCATCAGAATGATGTGCGCCCCATTCCCAACGTCAAGAGCTACATTGTCAATCGGCTAAACCAAGGCACGTAGCCATCTCCCAGCCCTCGTGGTTTCACATGGAAGTGCAGTGTGAACCAAAGCAAGACTGAATGTGTCTGTAAATAATTCTGTCCATCATTCACTCCATGTGGTTCTCTGGATTGAGAGATGTACCTCTTAAACCTCCTCAGTGGTTTGTCAAGGTCTGAGCAGCAGTGAAATCACCCTAAATCCAGGGACTTTCCAGAAGGTCGTTCAGAAGAGATACAGATGTAGAGTCACGGAAATTATTCAGAAGAGAGGCGGAGATAACAAGAATAGCAGCTGTTATGACATTTTAACTGTGTTCCAAAATGAGTGGTTAACTTGGCAAAACATAAGATCACTGAAGAAAGTATAAAGGTTCCTGCCTTTGCTGAAATTTTAAGCAAGAAGTTCTATTTAACAGAGATGTCATGTATGTCAACTGTGCCGGTTTAGATTACTTACATATAGTTTCTTAATAGGATACATGTACACATACAGTAAAAATATATCACATTCAACTTTCAGAGTTTTATAATATAGAGATATATATGAAATCAATCTTAAGTAACTTTGAGTGCTCCAGTTAAGACAGTAACTTATGTACCGAAGCATTACATTGTTTTGACTAAGCACAATTAGATGACAGGTTTTGTTTTTTTTTTTTAGAGCCTTTTATAAATCTTGTATAGAACTATTTTACCAGAACCTGTGCATTAAGAGAAAGCAATGTTACCCTTTTGCAATCTGTGAGTGAGAAGATTTTTCTCTCGGTCACAGGTATTTGACTAACTTAGGTTCTGTTTATGAAATGCTATCCCCGGATTCACTGGCAGCTCAGAGTTCATCTGGCAGGAAAGCCTGCCAGGGAATAAATCCAAATACAGCATGAGTTGTGGGGCTATTTTTTATGTCTACACTTGATTTGAAATAGGTAACGAGTAAAACAGGTTCATGCAAAAGTGCAAATAGAAACCTTTCCTGCAGTTCCTGTGAAGAACGTACCCACACTTTCTGATGTCTTCTGCAGCTGTAGAATGCAGTCCTCAGAAAGCTAGCCTGCTTTATTTCTAACCCTTTATGGAAATGAAGGGGTGCTTACCAAAAGGAAGCAGCCATACAGGCCTTTCAAAGGCCTGGTCCCAAGTCCTTTTTGAAGCCATGGAATAAAATCTGATACGTCATCCTAACAGAGCATTGAGTTTTAACTGCAATTGCAATATCTATCACTGCTCAGCCACCAATATTTCCCTGGACTAAAAGGACTAATTGCATTTTGAGGCCAACGCTGCTTTCTGGTATATATTCTCCATACAAGATGGTTATGAACTGCTTTTTTTTCCACTGGCGGAAAAAAAATTAAACCTGGGCATTTCATGGTCTCTTTCTTTCTTTCTTTTTCCTCGGTTTTTGGGAGATTTGTTTTTGTGTTTTGTACATGAGCCATCTTTTGTTTCCTAGAATGTGTTTTTTAAATTACTCTTATGCAAATGCTATTTTAAAAAATATAACTTAAGTGTTTGTTCAAATCAGGTTTAATGGCATTGCTTCTCTCTTATAAAAAGACTGAGAAAATTAAAATCATGCAGCACAGAAGTGCAAGCAGAGAGTTTATGAAGGATAAATAGAACTATAAACCTATCTTAATGAAGAAGAATGATGGAAACTAAGCCTGAACTTTAATATATAAAATACTTAGTCCTGCAGTGGAAATGTAGAATTAAAAATACTCATCATTCTTTTCCATTGACTTCAAAGTCAACTTCTTCATCCATGCTCCACCTCATCCCATCTAAGATTATAGACTAATAAATTAGTAGAAAGTACAAGCAATAAGACTAGATAGCACTTATGTATTTTCAGGATTAACCAAATAAGTGGAAACTGATTCTGACTGTATTTGTTTCCTAGTTTTCGAATGGCCCTGGGCCACCAAGGCTACTTCCTCAGAGCTCTCTACCCCTTCATTTTCTTCACTTAAACCCATAGTTCTATACCAACACTACATGATACAATATTTTGAAATTTAAAACAAGTTTACTAAAAACTCTTTTAGTAAACATGTCTTTGTTATAAGATATAACATAAAAGAAGAAAGCCTGGTCCCTCGGGCTCATCATGGGGTAGATACAGGCACTGAGGATTCTGAATATCTGTACAGTATGGCTTGGCAAGTTATTTTCCGTCCACTGTGGGTGAGAACTAAAAAGCCCCCTGCTGAATCTTTATGAGTTTTTATGACCATGTAGGAGACAAGCTGAGTTTTTGCTTGAGAAGGATAATGGTGTCCAGACTGCACAGGAGAGCATTAATGAAATTGTGCTGTTGGGAGGGCAAGAATGTTAGAGCCAAAGCATTTATAACAGCTTTCACATCAGAGTTGGAATGGTCCAGATGGAAGGCAAGTATGATTTTGTTAACTGGAGCCAAAGTACAATCATTAGAATAGAATGAATTTAATAGAGGCCCCAAGAGAAAGGGTATATATTTTATATGGTTTGATAACTGAAGAAAGCCAACAGGGAGACATCCTATCTGCAAAGCTCCTGGTCCTTCCCAATGAGGATGAGTCGATTGTGTTCCTGGTTCAGGAATTCTCTTTAGCAAGTTGGAAACAACAAGGAATCCTAGAAGATGGGCTGGGATATATACTCTAGTTGCTCTGTGGGCAACTGTGGTGAGGGATGAAGGATTAGGAACCACTTTCTTGTACCTATTTTGGCAGAGAGATTTATTACTTTGTGGTAGAGAAGAGGGGAGAGATGAGAAAATAGTCCCCTTCTAATTATGGTAATTTTTGCAATCAAAACTTAACTAGGAATCAGTAAGAATGAACTTCCAGTTGAAATGGGAAAAATAAATATTGGTTAAAATCACAAGTTTCTTGCTTGGCTTATATCCATTGTATAGGGTTTTGGGGTTTTTTTTGTATAAAGATGGGATGCAGAAAGAAGGAAAAGATCAGGGACAACCCACAATAATTTTTTAAAGGTATATATAGTAATTTACTACATCTTTTACATTGGTTTCAAATTAAACAGATTTATATCCACTTACAGCTGAATGTGAGAAAATTTTTAAGAAAAAAAACTGTAATGTTGGAGGTGTCCTTCAGGTCTCTCACAGCCATAAACACTCTTGGGGGGAACAGAGGAAGCAGAGGGAAAGCTGGCCGCACCGCTTTGTGGTTCACAAGTCTTTATAAATAGCAGTGCCTTTCAGAGGGGAGGATGGGAGACAAAGAAGTTCATTGTATTTAGACTGACTGATATTGCAGCATTTTTTCTTTAAAATATCTTTTAAATGAAACCATCTGAACATAGGGTGAGCCCAGGAATTCTTGAGTTTCAACCTCAGCTGTTCCTGATTCGTCCTTTCTTACAGAAAGTCTGTTTTTTTCTGCCCCAAATATCCCCATTGTGAAAATGGGAGTTGGGGGAAGGAGGGAGGAATTAATCTTATAGGAATGTGGGGAAAATACCTTAGTTGGGATGTCTAGAAAATACTTTGATTTTTTTAAAAGTGCTACACACTGCCAGTGCTAAGAATTTTATTGATGGTAACTTTGAACATTCCAAGATTTCAATATTCATGTCTTTAGATACCATTTACAAACTTATGAGATTAAATTCTGTAAATTGATTTTAATTGGAAGTACTAGGTGCTCTTTGTCTGAATGTTATTTGATCTTAGCCTGTAATTTCGATCATTTAAAAGCTTATTTACAGAAAAAGGTTAGGAGAGCTGATGAAGTGTTTGTCAATAAACTGTTTTCTCGAGTATGTCTTATGGCAGAAGCACAGAGTAAGATGCCCTCCAAAGCAACCATGACTCTCTTCTCAAGCTTTATGCTCTAGAAAAATTGACAGAGAAAAGCCCAAACAGCCACTTTCCTCACTGGGAGGGCAGAGATGAGAATAAAATATTTTCTGATATCACAACTCATTTCTTTAGAATCTCACAGGTTTCTATAATAAGAGGCAAATTAAATGCACAGGTGTAGAAATGAACTGTTAGTTTTTGGAGGGAAAACTTTGGATCTTTTTCTTTTTTTTAAGATAACTAGATGTTCTGGAAGTAGCATATTTGTTTTTCCATAGTCTCCATGATTTAGTGCTGGTGAGTCAGTTGTTACTTTTTTCTTGCCTTGTGGAAGAGCATGGACATTTAGATTTGTGAGACTACAAAGGGGCAAATATGTTATAAACTAGATGCTGGTTATTTCTGTATATTAAGTAAAACTTTGTCCCGTAAATTTGATAGAGGAGGGAAAAAAATGCAAACTCACCACATCCTTGTTCAGTTTTGAGAAATGTGGGGCTTATTTATTGCCCTCCTGTGTAGCATCTCCGTGGAGTCTGGGTTAGGCAACCACAGAATGTGAGCTTTCAGTGGGTTTATTAGCATTACAGTTTTCTTAGCTATTTAAAATCTAGGGATCATTTGGAAATGAATAACTAAACCCAAGGTGGGGTTAGAAAAGGTAAGATGTGCCCATTCTCTACTAAGAAAAGGGGAGCTACTATGTTAATATACATTTTCTAAGTTCTTTGTTTCATTAATTCTAGAGGGTTAAAAACAGCTGAAATTTATCCATAGCATTAGATATCTTTAATAGAGAATATTATTCATGTGAGAAATATACACAAAAATAGTAGAACACAGGCCATATTTTCTATGAAAGACATTTCTTCCTCATTTTCAATATATGTAGAAGTTAGAAGAGAGGAAAAAACAATTACTCTAAGACAAATTTTCATCTTTAAGGGACATTTATGAAAAGATTGAAATTAATACTCATGGGCTATTGTGTTTCCTGTTAGCCTGTTTCCTGGGAGATTCTAAATTGTGGTCAGATTCTGTTTTTATTCAGATGAACAAGATTAACTGCTTATTCAGATAACTGTTATTTTGGATAATGAGGATGGCTGAAGAAATGGAAAAGAGTGCAAATGAATTTACTAGCTGATGAATAGCTAGTGTAAGAGTTACATCAATGCCCGACTTCCATCAAGAAATGAAGCCACATCTTGGAGTATTATGGGGACTGTTACTATGATCTCAAAGACTGTGGTTATGAATTTGAAGGTAACAAAACATACATCTTCTGTTACTAACTTAAGCCATATACGTCATCTCTATGATTGATTTTTTTGACCCCGGTGCTTTTACTTCTGTTTCTGCCAAACTTTGGCCTACTCTATGGGGAAGGTGAGTGAGTAAAACTAGTAGTTAGGACAAATGTGAAGACTGTGAAAAAACTAAACATGTTCTTCAGAACGAGATCCTAGTCAGAGAACAGTAGTGATCAAAGTGCAAACTGTTGGAAAATCTGGATATATGTACATCTGTACATGTATATAGTGTATAATATGTATGTATATGTTATTGCTCATATGCAGAAATCTATCCATTTGAAGACAGCCCAGGTGGATCAGTTTTCTAGTAGAAAACCATTTAGGGCCATTCAAAACCATTAGGGCTGATGGGTAGAGTTAGAGTCTACTCACTGGGGATTTATTTGCTGTCTTTTGAAGCTACAAAGCCAAATGAACAAAGCTTGAAACATAATGGGACCATCATTTAGGTTATTGTTTGCCTGGAGTCAGAAGAATCTTTATATTTGAATATTTAACAGTTGGTTTGCAAATTTTATTGGCACCTCTTGGTTTTGAGTGATTCCTCCCCACCAGATCGTTTGAGAGTTTGGGGGTGGGCTTCTCTGGCCATTCAGATAAAGGGCCTTATCCATAAGTGGACAGGTTTCCCCATAGGGACCATTACACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGATTTAAAATCACTCCACAGTATTGATAAATAGCTCTATATTTTCAAGGTGCAGAAGAATTCCACAGCCTTAATTATTTCAGTGTCTTGCTGGTCTGCCTTAAGTGTATCTTCTGGGTTTTTGGTTGTCTCATTATTTTTAAATTTTTCTGCAGTTGTTCATTTTGTATGCACACAATGTTGTTTTGTAAAGGTAGGTTGTAAATATTTTATTTGTAAGTCAAAATCACTCATGTGTAATGTTGTAAAGTGATGACTTGCTGTCTTGTTATTATCATTACAGTAAATGCTCTAAGTTATGGATGAAGCTTCAAAATGTACATCTCAAGTTATGCATTCCTATAAATAT EMBV3_22370 CAGAGTCTCCTGCGTCACACTGATGGGTTGTCTGCTTTACGTCTAGAGTTTTATCCTGCC Gene GeneID:100299783|LOC100299783:XM_002694090:349_cdna Constitutive 0 NULL GeneID:100299783 16 GENE LOC100299783 NULL similar to preferentially expressed antigen in melanoma EMBV3_13087 CCACCTATCTAAGCTAACAGTCGCAGCCTTCTTCTGAGTTTCCAGGGAGGAGTGTGGACA Gene BVV0102_214369 + 0 NULL GK000019.2:11033144-11046573 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05326 AGCACCCATGTGACTTGGGAAAGCCTGCTCCCCGGCTTGAGAACAGACAGTCTGCCGAAG Gene BVV0101_043124 + 0 NULL GK000022.2:56825063-56829077 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12693 GGGTAGACTGTGCGCAGCGTTGCCCTGGCCCTGCTGTCCTGCTCTGATTACTGGTTTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29523 GCTCTACCTGGTGGGCTCCAGTGCTTGCAAGTACAATGCCCTGGCTCTGCAATGCTACAA Gene GeneID:789335|KLHL30:XM_002686583:49_cdna Constitutive 0 NULL GeneID:789335 3 GENE KLHL30 NULL kelch-like 30 (Drosophila) EMBV3_08892 AGAAGTGCCTGTGCAGTCTGGGCTCATGTAAAAGGTTCATCACTCACATTCTTGCTGCCG Gene GeneID:518850|SUSD1:XM_002689945:112_cdna Constitutive 0 NULL GeneID:518850 8 GENE SUSD1 NULL sushi domain containing 1 EMBV3_12053 GCAGGCCCACGGTAGCGCAGCCGCTCTGAGTGGATCTTCATGGAGGAACACGGAGTGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35271 CGACGTCCCTCGAGTCTAGTTTATCGAAAATACTTCAAATGCATGTCACAAACTGTGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13276 CATCTCATTATCCAAGTTCTACAGACCACGCAGGAACTTGCTTCATGGCTCTTTAGATGA Gene GeneID:505511|AHCYL1:NM_001101052:59_cdna Constitutive 2 NULL GeneID:505511 3 GENE AHCYL1 NULL adenosylhomocysteinase-like 1 EMBV3_05162 GAAGGAAAATGCTTCTTTCAAACATCTGGGCTGGAGAGAGGCTGCACTCAGGGATGGCTT Gene GeneID:614735|ASPHD1:NM_001081741:401_cdna Constitutive 0 NULL GeneID:614735 25 GENE ASPHD1 NULL aspartate beta-hydroxylase domain containing 1 EMBV3_05443 GACCCTCCTCATCTTTGCCAACAAGCAAGACCTGCCCGGAGCACTGTCCTCTAACGCCAT Gene GeneID:511349|ARL2:NM_001038079:589_cdna Constitutive 0 NULL GeneID:511349 29 GENE ARL2 MGC134005 ADP-ribosylation factor-like 2 EMBV3_10403 GTCTCGGCGGCAGAAGCAAGATGACAAAGGGAACGTCATCGTTTGGAAAGCGTCGGAATA Gene GeneID:100295568|LOC100295568:XM_002690032:22_cdna Constitutive 0 NULL GeneID:100295568 9 GENE LOC100295568 NULL similar to ribosomal protein L37 EMBV3_03276 TCAACCCTGAACATTCATTAGGACGGATGCTGAAGCTCCAATACTTGGCCACCTGATGCG Gene GeneID:100300738|LOC100300738:XM_002692136:110_cdna Constitutive 0 NULL GeneID:100300738 13 GENE LOC100300738 NULL hypothetical protein LOC100300738 EMBV3_28874 GCGTTAAGTCTGGAGTGAATGCCAGGTTTTGCTGATGTGCATCTCTGTTGGTTACACGGT Gene BVV0102_067012 - 1 EMBV3_22734 GK000013.2:79556311-79580467 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06036 TACACCTGGAGGCATCTGTTATTCAGCTTATCTTTTGAGTGGGTATTTGGCACAATGAGG Gene GeneID:539347|C5H12orf23:NM_001034673:16_cdna UTR3_Alt 1 NULL GeneID:539347 5 GENE C5H12orf23 C12orf23 MGC127570 chromosome 12 open reading frame 23 ortholog EMBV3_23815 GGGCCTGCTGCAGGCCGAGTACACCGAGGGGGACCTGATCGAGAAGCTGCTCAACTACGC Variant GeneID:617375|POLR2L:NM_001113726:19_cdna 123^185 1 EMBV3_11490 GeneID:617375 29 GENE POLR2L MGC133494 polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa EMBV3_05067 GGCTCTCAACAGAGCCACAAGTGCGTAAGAGTTCAGTATCACTGTTCTTTGTATCTAGAA Gene BVV0102_083065 - 1 EMBV3_04557 GK000028.2:5714663-5836935 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38411 TTAGTGATCAGAAATGAGATGTAATTCCCCAATCCCTGCCCGCAAGACCTGAGTAGGATC Gene GeneID:507997|FAM120A:NM_001098905:87_cdna Constitutive 0 NULL GeneID:507997 8 GENE FAM120A MGC138989 OSSA constitutive coactivator of PPAR-gamma-like protein 1 EMBV3_38360 CTGTAACCCTTTGAGGTACAATACCATTATGAACAGCCACACCTGCATCTCGGTGGTGAC Gene GeneID:507229|LOC507229:XM_002687111:439_cdna Constitutive 0 NULL GeneID:507229 4 GENE LOC507229 NULL similar to odorant receptor ORZ6 EMBV3_21776 ACAGAGTCCGCAGCGACTACTCAGCACTCACCCACTGTGGCCATACTTACTGTGGCTATA Gene GeneID:617948|TNFRSF13B:XM_002695872:369_cdna Constitutive 0 NULL GeneID:617948 19 GENE TNFRSF13B NULL tumor necrosis factor receptor superfamily, member 13B EMBV3_39645 GGATTGGTGGAGCCCTTGCAGCCCTTGTACACACCATCTATCCAATGAACTTCCCCATCT Gene GeneID:517722|LOC517722:XM_002689132:120_cdna Constitutive 0 NULL GeneID:517722 7 GENE LOC517722 NULL similar to olfactory receptor Olfr332 EMBV3_08358 GCGGGCTGTAATCCACAGGTTCACAAAGAGTCAGATATGACTGAGAGACTAACACAGTCC Gene GeneID:528221|TRMT5:NM_001034565:136_cdna Constitutive 0 NULL GeneID:528221 10 GENE TRMT5 MGC127749 TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) EMBV3_20043 GCCCTGCCACCATTGCTCTTGATTCCCTCAGCTGGGCCTGCTGCATGAAGAGCTTCACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21515 GAGCTAAGACGTAATGTCTCTGACCTGTTGTGGGGAGTGGGGAACAAAAAGAGGAACCAA Gene GeneID:540404|PRKAA1:NM_001109802:83_cdna UTR3_Alt 3 NULL GeneID:540404 20 GENE PRKAA1 MGC165837 protein kinase, AMP-activated, alpha 1 catalytic subunit EMBV3_36469 AAACCCTCGAATTCACCAGGAACATTACCATTTGTGACAACATGGATGGACCTTGAAGGC Gene BVV0102_195132 + 1 EMBV3_15861 GK000030.2:80637943-80774501 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244781 TCONS_00244778 TCONS_00244777 TCONS_00244775 TCONS_00244780 1 XLOC_150553 NonCoding TCONS_00244778 XLOC_150553 NonCoding NonCoding LOC100848500 X:80678630-80688185 j TSS183894 1543 4 TCONS_00244778_5 62 0.56448476992871 3 0.838810969227549 9.76678601392976e-05 0.000620018583797021 9.51006757750347e-05 0.000123878011580657 0.000174586731263218 4.35384557889384e-54 5.67040198037e-05 2.49161705749569e-05 1.90109785642972e-05 0.000156438206125156 3.76941116606196e-18 1.98160378808252e-140 6.88500485009836e-48 0 1.45922501931265e-46 0 0 0.000635948660412789 0.000575315244260342 2.22115172148752e-05 9.83704106757501e-05 0 0 4.3459919344272e-05 0.000206381227432982 4.05157201799662e-05 1.29355519996714e-05 0 2.40624131322947e-97 0 XM_005202454.1 UPP2 PREDICTED: Bos taurus uridine phosphorylase 2 (UPP2), transcript 1e-20 105 69.53 0.2099805573558 XM_005264867.1 METTL6 PREDICTED: Homo sapiens methyltransferase like 6 (METTL6), 4e-15 87.8 72.12 0.106286454957874 0 noncoding CTCTCTTTCCTATCTGAATTAATTTTGTGGATAGTTTCTTATGTTCCCTGGGGTGGCGAACATTTCCGGGAGGATTGAGAGCGAGCATGGGGATGGCGTTAGTTTTCAGACCCATTCTAAGAGTCATCGAGAAGAGTAACGCGAAGATGGACGCGTATCAGTGGCGTGTGGACATGCGCATCAGCGCTGTACGGACTTGCCAAGTCAGCTGTGTGCCCTAGACCTTCAAGCTATTTAGTGGCAAGTTTCTGCTGGCCCTTTAGTTTGTGGATCGGGGCTTGAGTGTTTGAGGGAGAGAAAGAGAAAGCCAAGTAGCCCCGGAGCCCCTTTTAAGAGGGCGTCATTCACCCAGCTATCCGTGCGTCCGTTCATTCATAAAGCAAATATTCACTGAGCACCAGTTACGTACCAGACACAGTTTTAGACTCTGGGGATCCAAGACACTGAAGATCACAAGAGTCCTGTGCTCAGGGACCACTCCTTCTAGGGAGTGGAGACAGAACATAAATAAACTACCGAGTCGATTTCAGATAGTGATAAGTGACAGTAAAAAAATAAAACGGGGTGATATGATGGAGAGAAACGTGGTGGATATGTACCCATTTTCACTGGGTGGTCAGATTCAGCTTCTTCAAGGAGATGACAGGTGTGGTGCCTATATGGAACTCTGCTTCAGGGAGTGCTGATGGGAATCGTGATTAGAAAGCATGGTGCTGTATGGAACTCAAGGAAGAGGAAAGCTACAGGAAACTCAGACTGGCCACCGCTGAAGCTCACAGCGGTGTGGGCAGACAGAAGCATCTGTGTAAATCTCCGTATGATGCCAGGAGCTCTCAGGAGAGGCTCAGAACTACTGTAGAATGTCCAGCCTTCCTGGCAAATGGAACTCAGTGACAAGACATCAAAACCCTCAAATTCACCAGGAACATTACCATTTGTGACAACATGGATGGACCTTGAAGGCATTATGATAAGTGGAATAAGTCATACAGAGGAAGACAAATACTGTTTACTCTCACTTGTATGGGGAATTTTTTTTAGAAAAGTAAAACTCATAAAAACAGAGTGAATGAATGATGGTTGCGAGAGACTGGAAACTGGAAAAAAGGAGACATGTTGAATAAAAAGTACAAATTTTCATTTAAAATGAGTAAGTTTGGAGAATCTAATATTTAGTGTGATGACTATGACAATTCTGTGTTATATACTTGAAAGTTGTGAGGAGAGAAGATCATAAATACTCTCACCACAAAAAAATACAGTAATTATGTGAGGAGATAGATATTAACCAACTTTATCACAGTAATCATTTTGCAATACATATGGTATCAAATCATCACCTGTACACCTTAATCTTTCACAGTGTTATATGTCAGTTATATCTTAGCAAAGTTGGTAAAAAAAAAAAAAAAGTCTGTCTAGTATGTCCTATATCTGGGCTTCCTCAGGAATGATTTTGTCAATTCATTTTGTCCCTTTGAATAGGCCATGTTCTTCTGTTTCTCTGTGTGCTCTTTGATTTTTTAGTTGAAAGTTCAGTATT EMBV3_42350 ATACAGCCTTGAGTGATGAGGATGAGGAGTTCCCAGAGCTCAGAGGCCCATTCTGCTCAG Gene GeneID:780880|LRRC46:NM_001079799:186_cdna Constitutive 0 NULL GeneID:780880 19 GENE LRRC46 MGC137144 leucine rich repeat containing 46 EMBV3_39721 TGAGACTGCACGACTGGGATGACTGGAATGTGTAAGAAGGTACTCTGAACAGGCAAGCCT Gene BVT0102_240928 - 1 EMBV3_14895 GK000020.2:24660205-24783407 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114853 TCONS_00114854 1 XLOC_069373 NonCoding TCONS_00114854 XLOC_069373 NonCoding NonCoding - 20:24781729-24783196 - TSS85554 1467 1 TCONS_00114854_1 52 0.149284253578732 1 0 0.00192445702238585 0.00229462351882739 0.00239076448109993 0.00114591974488901 0.00198040396989402 9.26574707008238e-05 0.00152252129555999 0.000995866295077528 0.00273336900700058 2.79376358639455e-06 8.01033797591724e-05 0.000124205974938134 0.000153210934867477 0.000240486827606057 0.000307677766827221 0.000288060082523855 0 0.000530144069438581 0.00394230055470504 0.00241184333528791 0.000342476195358143 0.000510878709497762 7.50423408478088e-05 0.000345078494768512 0.0041293847881949 0.00190344467804107 0.00262155623574872 0.00022261437795784 6.61841564780556e-06 7.58188196166498e-05 NM_001105478.1 SSLP1 Bos taurus secreted seminal-vesicle Ly-6 protein 1 (SSLP1), mRNA. 1e-89 334 93.27 0.148602590320382 0 noncoding 0 0 0 0 -0.0405253625226338 0.772945271702526 -0.0218197523634079 0.643467610026881 GCGCGGGAGCGGCCGGGGCGCTGGTTCCTGTGAGGAGGGCGGAGGGGCGGGGGCTAGGGCTGCGAGGGCGGAAGAACAAACCGGGAAGAGCGGAAAATCAGCCGGTGCTGTCGTCGCCGGCGTTCTGTGTGCTTCCGTGGCCTCCGAGTTGGGTAAATCGGAACCGAACAGTGTTCCATAGGAGGAGAGCTGTAGGAAGCTTCCCCTAGTAGGAAGCTCGCGTTGAAACGTGGGAGGTGTAGAAGCCACAGATACTTAATGCCCCTCTCCGGAGCGATTTCCCGAAGGCCCTGTGGCCTTGAGACTGCACGACTGGGATGACTGGAATGTGTAAGAAGGTACTCTGAACAGGCAAGCCTGTGACTCGGGGGCTGCCCCTCCCCACTTTCAGGATGTGAAGCGAAGGTGGACAGCTCCAGCTTGATGTCCTGGGGGTATACAGAAGCCCCGCCCGCGGCTAGAGCTAACCTGGGAGGTAACCCTCTTATCAGAACGTTAGATTGCCCCCCGGAGAATCTGCTCTTCACCGACGGAAAAGAGCAAGAAAAAAAAGTTAAGGGACTGTGTATAAGTCGGTTGTAGACTCAGGACTCTCGGGAAGCATCAGTTGGTCAGTTCTTTGCGTGTTTTGTGCCCAGTTACACGGTACACCATTCTACTACCCCTGTGGGGAATGAGCAATAGGATGAGAAGCGCTCTGAAAAGACCCGAGTAATAGTGTTTGGCACCCGATGTCATTCTAAGCAGTAAAAGTATCTATCAGCAGCTACATTTGACGTGTGCACCTCCTGGTAAATAATGTGAAAACTGGCACCAGAATTTAAATATTGCATTCGGCGTGGAGGGAAAAAGCAGTTCAGGCTATGAACAACTAAATCTTAAACAAAAAGAGCCTTGAGTGTTCTTATCCTGATTCTTTTCTGATTCGGGCTTTTCTTCCTCCAAGTGTGTGTCTAAATTATACTTATGAAGAAATTACAGTGAGTTTTTGCTATGCAGAAGCTAACGAGATTCAGTAGCATCAAGCCCTCAGATCCAGTTTTGATTGATCTTGGCCTGGTGTTCAGTCAAAAACATGTACGTTAATAAGATTTTTGACGTGGATTCTGGAGGTGATTATCTACTGCAAAACTACAGCACAACTGGTTGAAACTAACTGCAGAAATTAAAGGCCTCTCAAACTTACTAACAACAGTAATTCAAACAGACAAGAAACGGATCCTTTTTTTTTCTTTCTCTCTATGAATTCAGTTCAGTTCAGTTCAGTTCACTCAGTCACGTCCGACTCTTTATGACCCCATGAATCGCAGCATGCCAGGCCTGCCTGTCCATCACCAATTCCCGGAGTTCACTGAGACTCACGTCCATTGAGTCAGTGATGCCATCCAGCCATCTTATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAAC TCONS_00113603 r 5' 53 TCONS_00113603 r 5' 53 EMBV3_02571 GTGCTGTGAATGGTTTCTTTCCTGCTTCTGTGGAAAGGTCTGTGGTTGGATCAGAGAAGG Gene BVV0102_149957 + 0 NULL GK000027.2:43279887-44071555 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04544 CAAAAGCCTCCTGCGAGAGCCCTGCCAAAACAAGGCATCCTGTTAAAAGTGGCTGAAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07576 GACAGTGGGAGTTCCAGGGAAAGAGAGAATGCAGATGCCACCTTGGGACTTCAGGCTTTT Gene BVV0102_107810 + 1 EMBV3_37631 GK000007.2:5027042-5051321 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39015 GTCCCTGTTTTTTGAAGTTGTGCTTGATGTCCAGGCCCTTTCCAAGAAGAAAAAAGGGGG Gene GeneID:615436|AFAP1L2:NM_001076375:78_cdna Constitutive 0 NULL GeneID:615436 26 GENE AFAP1L2 MGC137948 actin filament associated protein 1-like 2 EMBV3_09617 GAGGCTGTGCGCTGTTTGCACGTCAGGAAAGAGGCTTATGGGTCGAACTCTGCTGCTCGT Gene GeneID:618423|GFER:XM_002697921:562_cdna Constitutive 1 NULL GeneID:618423 25 GENE GFER NULL growth factor, augmenter of liver regeneration EMBV3_40167 CTCCAGGGAAACTGACAGCGATCGTAAGCCTGTTGGTAAAGAAGGCATCAACAGTAGCAG Gene GeneID:100296443|RBM6:XM_002697034:475_cdna Constitutive 0 NULL GeneID:100296443 22 GENE RBM6 NULL RNA binding motif protein 6 EMBV3_16710 CTGCACCCTACTGTCCTCAGAAAGCGAGTGCTGTGATCATGGGTAACATCTTTGGAAACC Gene GeneID:510994|ARF3:NM_001015571:62_cdna Constitutive 0 NULL GeneID:510994 5 GENE ARF3 MGC142561 ADP-ribosylation factor 3 EMBV3_25248 TGGGAGGTGCAGTGGCTGAAGCTGGAGAAGATGGTCAACACCCTGATCCTGAACTACTGT Gene GeneID:281609|AIPL1:NM_174234:15_cdna Constitutive 0 NULL GeneID:281609 19 GENE AIPL1 NULL aryl hydrocarbon receptor interacting protein-like 1 EMBV3_27272 TTGTGATGTCACAGCCTTTTGACTTTGAGGACCTCTGCGATGGTCTAGAGAGTTTCTCTC Gene GeneID:785390|LOC785390:XM_002683931:2_cdna Constitutive 0 NULL GeneID:785390 Un GENE LOC785390 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_42003 AGGCTTCCCGGCTTTAGGAAGACCAGATCACATATCAAGCTTCTGCGATGGACCAGGCAT Gene BVT0102_273183 + 0 NULL GK000030.2:12197003-13146116 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246283 TCONS_00246274 TCONS_00246281 TCONS_00246275 TCONS_00246280 TCONS_00246285 TCONS_00246282 TCONS_00246284 TCONS_00246279 TCONS_00246276 1 XLOC_150950 NonCoding TCONS_00246284 XLOC_150950 NonCoding NonCoding - X:12989817-13073258 - TSS184681 602 5 0.992845158197507 0.00203497088938005 0 2.55181514294987e-299 0.00133718331951142 0 0.000856797917520354 0.00060559064795449 1.16985988711686e-78 0.000999795351930634 2.01812266891077e-114 7.57762734511554e-05 0.0002057334320248 1.29370471793966e-17 0.000109754523991785 0.000109348720774834 0 0 0 0.000589820329201188 0.000728270963720802 4.53933642439824e-28 0 0 0 0.00215412856466619 0.000623172083033505 0.00214148880541036 1.46933680451803e-25 0.000120521997630928 0 0 noncoding 1 0 0 0 -0.286606247178702 0.0746287601967721 -0.0394545311058869 0.421122565242 CGCCAGGATTACTGGGAGGGAACGTGTTTTCCTCCTGGGGTGGGGGGAGGTTTTAAATCTGGGAAGTTGCTTTGTGAAAGAGGGGCTGGAAGAAGCTGCTGCTGCAGGCTTCCCGGCTTTAGGAAGACCAGATCACATATCAAGCTTCTGCGATGGACCAGGCATTGTAATAGGCACTCGAGAAACAAGGATATTCCCAGTCCTCAAGGATCTTCCCTTCTGGTTTGCAAGGAAATGACTTGGTAGCCTGGTTCTCATAGAAGCTGCCAGTAGGAATTGCCCCACTCTCCCACCTTCAGAAACTCTGCTCGCATGCACCTGCAACAGCAATGGAGCTCAGTCCCAAACTCAGCTTTAAGTACATGTTGGAAATTTTGAACCATAAAACAAAAATCTAGGTCTGAGTTCATGTTACGAGTAATTCCACAGAGAAGAAATTCCTGGAGCACTTGTAAAAAACAATGGTAATAACACCTCCCTACTGAAGAGGAAAGCTTTGAGCCATCCATAAAAAAAAAGTCACAAAGCCAAGCCATGAGAGTGTCCCATTTCCTGGAAATAGTCAATAAAATAAATTTGCAGGATTCCACTGTCATCAGAGT TCONS_00246294 TCONS_00246295 TCONS_00246296 s 3' 368704 TCONS_00246294 TCONS_00246295 TCONS_00246296 s 3' 285283 EMBV3_21282 TTTCAACTTAAGGACCGTGGGCTGACCGAGCTGCTCTTCCCGATGAGTTATGCAATCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38943 GTGCCTTGCTACATGGGAATCCTTCCTTACATCACAGACAGATCTCCACCTGGAAGAAGC Gene GeneID:512918|SNX7:NM_001163937:89_cdna Constitutive 0 NULL GeneID:512918 3 GENE SNX7 NULL sorting nexin 7 EMBV3_05382 AAGCTTTACTTGGTGGTGGGGATTGGTGCCTGTGTTCTGGTGGTTGGGGTTGGATCTTGT Gene BVV0101_070863 + 0 NULL GK000015.2:1802224-1855685 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17196 TGAGAGGAAAAGTACCAGGTTTGAAATCAGATGGTTCCTCTTCTTTCCTCTCTCTCTCTC Gene GeneID:512359|LOC512359:XM_002688360:170_cdna Constitutive 1 NULL GeneID:512359 6 GENE LOC512359 NULL similar to Ankyrin repeat domain-containing protein 56 EMBV3_41557 CCTGATCACAGATGACGAAGAGTATGCTGAGAATTTTGGCAAGGCCACCTGGGGTGAAAC Gene GeneID:508555|CALR3:NM_001038514:47_cdna Constitutive 0 NULL GeneID:508555 7 GENE CALR3 MGC134098 calreticulin 3 EMBV3_15509 TGATAGCTGAGTTCCAGCGATACGGGTGAAGGGACCACTGCAGGTTCTTCTCCTCTTTGT Gene BVV0101_027284 + 0 NULL GK000002.2:85097108-85136810 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14976 GTCATTCGAACCCGCAGTGATGAATGTTTTCGCATTGTAAGTGACAGGTCAGGGGACTGG Gene GeneID:514945|BMS1:XM_002698827:63_cdna Constitutive 0 NULL GeneID:514945 28 GENE BMS1 NULL BMS1 homolog, ribosome assembly protein (yeast) EMBV3_09869 TCTCCAGGCGGTCCATCTTCATTTCAGCTACAGTTTTGACTTCCAGAGCAAGGAAGGAGG Gene GeneID:539560|SPRYD4:NM_001076173:22_cdna Constitutive 0 NULL GeneID:539560 5 GENE SPRYD4 MGC140524 SPRY domain containing 4 EMBV3_37709 CCCCTGGCCAGGCAGAGAGAGCTGGACTCGGGGAAGCAGCAGAAAAGAACAAAAGATGTA Gene GeneID:511773|HRNBP3:NM_001075537:383_cdna Constitutive 0 NULL GeneID:511773 19 GENE HRNBP3 MGC139681 hexaribonucleotide binding protein 3 EMBV3_20851 TGACACACTGGGGGCTGTGGCCAAGCAGGGACTGGAATACACTAATTGTGGGAAAGCTTT Variant GeneID:515594|PRMT5:NM_001105374:152_cdna 130^248 1 EMBV3_30457 GeneID:515594 10 GENE PRMT5 MGC140182 SKB1 protein arginine methyltransferase 5 EMBV3_35397 ACATTGAGGGGCACAGAGGTGGAGTCCGGTGGACAGACTCTGGCGTCTTTGAGTCTTCAA Gene GeneID:100296782|LOC100296782:XM_002689970:61_cdna Constitutive 0 NULL GeneID:100296782 8 GENE LOC100296782 NULL hypothetical protein LOC100296782 EMBV3_34420 TTGTGGTTTCTTCTGATTTCTGCCATTGGGGGTATGAGTATTATAGAACAATTAGATCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10055 TTTCATCAAAATCTAGCCAGAGCCCTTCACTGCCATGATAGCTGGGGCTTCACCAGTCTG Gene GeneID:533199|MAP2K1:NM_001130752:194_cdna Constitutive 0 NULL GeneID:533199 10 GENE MAP2K1 NULL mitogen-activated protein kinase kinase 1 EMBV3_08623 TGAAAATGGAGGCTATAAAAATGAAGATTTTTCTTTGAATTATGGTATGGGGAAGATTTG Gene GeneID:504257|SCOC:XM_002694339:76_cdna Constitutive 1 NULL GeneID:504257 17 GENE SCOC NULL short coiled-coil protein EMBV3_38283 TGTGACACTGACTTCTCTCACCATGCTGTTTGTCTTGAACCCAGAGCCCAAAGGGCCAAG Gene GeneID:505393|TOMM40L:NM_001014853:233_cdna Constitutive 1 NULL GeneID:505393 3 GENE TOMM40L FLJ12770 translocase of outer mitochondrial membrane 40 homolog (yeast)-like EMBV3_30047 TGCCAGATGGTGGGGATGATAGGCATGAGTGAGCAGGCTTCAGACCAAAGCAAGGTAGAA Gene GeneID:786657|LOC786657:XM_002686849:69_cdna Constitutive 0 NULL GeneID:786657 4 GENE LOC786657 NULL similar to major facilitator superfamily domain containing 1 EMBV3_30537 TGCTCAGTTGTGTCTGACTCTTTGCGGCCCCATGGACTGTATATCCTGCTAGGCTCTTCT Gene GeneID:614572|HELB:XM_002687538:523_cdna Constitutive 0 NULL GeneID:614572 5 GENE HELB NULL helicase (DNA) B EMBV3_03140 GTGCATCCATCACCACAATCTGATTCCAGAAGGTTTTCATCAGCTCAAAAAGAAACCCAG Gene BVT0102_010501 + 0 NULL GK000011.2:63367594-63413127 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05408 TCCAGTACTGTACACTAGGTTAACACGGTGGGATCTTCAGTTATTTTTGTTTGTAATATT Gene GeneID:617631|LOC617631:XM_002698572:130_cdna Constitutive 2 NULL GeneID:617631 26 GENE LOC617631 NULL similar to Uncharacterized protein C10orf88 EMBV3_11937 TTACCAGGTGGCTCAATGGTAAAGAATCCATCTCCCAAGCAGGAGATGTGGGTTCGATCC Gene GeneID:281484|SELE:NM_174181:70_cdna Constitutive 0 NULL GeneID:281484 16 GENE SELE NULL selectin E EMBV3_24861 GGTGGAAAGTTGGGATTCAAGGTGGTGGTAAAAGGGACTGTAGCTTTATCTGTAACATGC Gene BVV0102_107738 - 1 EMBV3_06607 GK000013.2:65327797-65340131 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02022 GGGACCTCGACCCTACTGTATGAGTTTGAGCTGCTGACGTGGGATGAGGAAGGAGATTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42352 ACTACCGCGGCTTTGCCGTCTTGTACCTGGAGAGGGCGCGGCAGCTGTCGGTGAAGCTGT Gene GeneID:517356|C8G:NM_001110076:41_cdna Constitutive 0 NULL GeneID:517356 11 GENE C8G MGC128407 complement component 8, gamma polypeptide EMBV3_39021 AAAGTACAATTGCCTGTATGCCCTGGAGGAGGGGGTAGTCCGCTACACTATGGACGTCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11969 TTTGGTACCTACCAGTTTCTGATGTTTCAGGCCAGGAGTGGGGTAAATAAGTGTGACCAC Gene BVT0101_002417 + 0 NULL GK000006.2:92193390-92205905 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205774 TCONS_00205779 TCONS_00205775 TCONS_00205773 TCONS_00205778 TCONS_00205776 TCONS_00205777 1 XLOC_124745 Coding TCONS_00205777 XLOC_124745 Coding Coding G3BP2 6:92202113-92241571 j TSS153580 6406 1 TCONS_00205777_3 439 0.0359038401498595 11 0.837924829561295 0.00368478558600753 0.000763093898705821 0.0040870754688566 0.00277475700419773 0.00190221990295605 0.00120019533997889 0.0013585269633711 0.00193326668230136 0.00465956003024371 7.94512516844015e-09 4.72332511074471e-17 1.97512921337309e-11 0.000318264826343262 0.000490645650363352 0.000288469807237694 4.20269365550866e-07 0.000455264334702376 3.63534517951172e-19 0.00349859616757579 0.00307877854119943 0.00058761530912454 9.36766971277159e-07 8.96449801352286e-12 2.49672936945237e-06 0.00431848480683985 0.00536133137294397 0.00123657156142253 1.76338497738154e-12 3.25890510186459e-12 1.6891638104451e-13 XM_005208111.1 G3BP2 PREDICTED: Bos taurus GTPase activating protein (SH3 domain) binding protein 2 (G3BP2), transcript variant X1, mRNA. 0.0 5555 100.00 0.480643147049641 NM_203504.2 G3BP2 Homo sapiens GTPase activating protein (SH3 domain) binding protein 2 (G3BP2), transcript variant 3, mRNA. 0.0 4336 91.46 0.4834530128005 TCONS_00205777_3 sp|Q9UN86|G3BP2_HUMAN G3BP2_HUMAN Ras GTPase-activating protein-binding protein 2; 0.0 660 87.76 0.997722095671982 1 coding 0 0 1 0 0.148278671066127 0.430786139541566 -0.0952577764435948 0.248195314683593 GCGGGACGTCCGTGTTCCTTGTCGCTCGCCGCAGCGCCTGGCGCCCGGGAAGAGGTGGTTGTGAGCGGAACCTGCTCTCGGCTCTCCGGCTTCCTAGGCTTGAGATTTGTCAGAGGGAGGGGGCGGCGAGTGAGAAGAACCTGCTGCAGCCGGTCCTCGGCGACTCTCCCGCTGACCTCCGCGCGACGTACCCGCCGCCGCTGTTGGTTGGAGTATTTGACATTGTGCAGCAAAGAAATGGTTATGGAGAAGCCCAGTCCGCTGCTTGTAGGGCGGGAGTTTGTGAGGCAATATTATACTTTGCTGAATAAAGCTCCAGAATATTTACACAGGTTTTATGGCAGGAATTCTTCTTATGTTCATGGTGGTGTAGATGCTAGTGGAAAGCCCCAGGAGGCTGTCTATGGCCAAAATGATATACACCACAAAGTATTATCTCTGAACTTCAGTGAATGTCATACTAAAATTCGTCATGTGGATGCTCATGCAACCTTGAGTGATGGAGTAGTGGTCCAGGTCATGGGTTTGCTGTCTAACAGTGGACAACCAGAGAGGAAGTTTATGCAAACCTTTGTTCTGGCTCCTGAAGGATCTGTTCCAAATAAGTTTTATGTTCACAATGATATGTTTCGTTATGAAGATGAAGTATTTGGTGATTCTGAACCAGAACTTGATGAAGAATCAGAAGATGAAGTAGAGGAAGAACAAGAGGAAAGACAACCGTCTCCAGAACCTGTGCAGGAGAATGCTAACAGTGGTTACTATGAAGCTCACCCTGTGACTAATGGCATAGAGGAGCCTTTAGAAGAATCCTCACATGAACCTGAACCTGAGCCCGAATCTGAAACAAAGACTGAAGAGCTGAAACCGCCAGTGGAGGAGAAGAACTTGGAAGAGTTAGAGGAGAAGTCTGCTTCTCCTCCGCCTGCTGAGCCTGTTTCTCTGCCACAGGAACCACCAAAGGCTTTCTCCTGGGCTTCAGTGACCAGTAAAAACCTGCCTCCTAGTGGCACTGTTTCTTCCTCTGGAATTCCACCCCATGTTAAAGCACCAGTCTCACAGCCGAGAGTAGAAGCTAAACCAGAAGTTCAATCTCAGCCACCTCGTGTGCGTGAACAACGACCTAGAGAACGACCTGGTTTCCCTCCTAGAGGACCAAGACCAGGTTTTGGAAATGTTGTGGAACTTCGCATCAATACCAAGGGTGTTGGGGGAAAGCTTCCAAATTTTGGTTTTGTGGTTTTTGATGACTCTGAACCAGTTCAGAGAATCTTAATTGCAAAACCAATTATGTTTCGAGGGGAAGTACGTTTAAATGTGGAAGAGAAAAAGACAAGAGCTGCCAGAGAGCGAGAAACTCGAGGTGGTGGTGATGACCGCCGGGATATTAGGCGCAGTGATCGAGGTCCTGGTGGTCCCCGGGGAATAGTGGGCGGTGGAATGATGCGCGACCGGGATGGAAGAGGACCCCCTCCGAGAGGTGGCATGGCACAGAAACTTGGCTCTGGGAGAGGAGCTGGGCAGATGGAAGGCCGCTTCACAGGACAGCGTCGCTGAGGCTCCACTCTTGGCAGAGTCTTGGCAGTGGTACATTATTCATCGTGTTTGCATTCTTGTTAATTTTTTTTTTTGGCTTTGGAATGTGACACAGCCTTTTTGATCATTTCTTTGATGTGAAAAGCATCTTTCAGTTATCAGTTAAATTGAGGTGGACATTATTTCCCCAATTTTACAACAAGATTCGCATTGTTAATTTATAAATCTAGACTTGGAGAATTAAGGACTGAGAAATGACCATATCTTAAACTGTCTACAACAAAATGAACTTAAAAGGACATGCCCAACTGAATTCAGGTCCTTTGAGTCAAAAAAATCCTCTGCTGCACATTTTGTTTAAGTGTTACTGTTTCTGCCTATTGTTGGAAACACAAATAGTGCAATTTGTGCAATTGGAGAATCTTGCCTTTTTTTCTTGGCTCCCCCCAAAAATACAAACCAACAGAAACTTGTTATGCACTCATCAGAATGCACTAATGGGTACTCTGAACTCATTAACCTTGACATCTGCAACAGGAGGCAACAGGGGAAAAAAATCTTTCATCTTTTTTTCCAGTAGAGCATAGTTTGTGAAATGATGAGGGCATTTTTACCTGCTTGCTGTGACCAGCGTGTGTACACATAAACCTTAACAAGACTACAAGTATATTCCAGAAGGAAGTCATTTAGTTATGAACTAAATAAAGATCAGAACTTCAAATGCTATGGTCTTGAATATTAGACCAGATTTAGTAGCTCCATATCTAAGGTTTTTTTCTACCTGCCCCTCTTCAGTACAGGGATGGCTGGCTGCTCAACACACTCCTCCTCCCCCTTTTCCTTTCTTTAAGCTGTGTACAGTGAAAATTGTCTTTACTGTATTTTTGTTCTCTGGTAATGTAATACGCATGATGGTGCCTTCTATTAATACATCATTCCAGTCTTGCTGGTAATTTTGTACAGTATAGTGTATAAATTGCTGTGCTGCAAAGCCAAACAGCTGCAAAATGTTGAGAAATCATTGAAGTATATAAAAATTGCAGTATCTTTAAAATCAGTAAAATTAACTAGAATATTATTTACCTTGTTCTTGAGTTAACAACTTTGTGTTCTCTGTGGGAGGGAGTCTTGTGTGTTTGGGAGGGAGAGTGAAGGAGGAAGTCAGTTATTTGAGTCAAAGTCTCTTGTTGACTTTTCTCTTAACCTGAAGGTGAACGTTGAAGCGTATCACTTGAGAGGTGCTTGGAAAAGTCAGTCAACTTGATGTACATTTTTAGTGACCTTTTAAAAGCAGTCAGATTCCATAAATGGCACGTAAACCTGAAGTGAGGATACTGCAATTTTCGGAGAAAAGAACAGCAGCTCTTAAGTGTTTGCATTTTCTATTTGGGGGGGCAGGGAACTGTCATTCATTTTGCACAATTCTTGACCTGATGTCAGCACCCGAGTGGCTCTGAATTTAAGTCTGGGACGACATCTTTTATTTTTACATGAATCTCTAAACAATTCTGTGAGCAAAGTTTGTAGCTGCTGGATTATTGTCTGTCTTTATAGCAAGTTCCGGTAAACCACAAATATGACAAAGGATATCCGATTTTATGCTTGGAGTATTTGGTACCTACCAGTTTCTGATGTTTCAGGCCAGGAGTGGGGTAAATAAGTGTGACCACTTAAAGCTGCTTGTAGCATGGAAGACTTCTCCATTCTGTCTTAGTAAAAGCAAACAAAAAATGCACTTGACATAATAGCAAACTGTTTCTTAATTATGAAACTGTTTGCTATTTAGTAAACTAGCAAATGATGCACATATTTTGTTTTCCATGTACCGGGCAATGTAAGTAAAATTAAGCCTATCCCTTTTTCCCCCCCTTGAATGAGGTCTTCCATGTTCGAGGAAAAGTCTTGCACTATTGGATATATTTTGGGGACACAGATTTCTCAATTTCCATTTTGGGGGGCTTAAGGATTTTTTTTTCCTGTTTGAAATACATTTACGCTTTCTAATGTATAGTACTTGAAGTTCTTACAAGAAAATTACTTTTGAGTTTTGAAGCTTTTATTCAAACTGCTTTTAAATAAGTGGTTTCTTGTCAGTGTTTTTTTTTTTATATATATAGCATATTGTTCCTCTTTCATTTCTTTCTCTTCCTTCATTTGATATATATATATATAAAATTTTCAATCCAAGATATTGCCCTACCGCCCATGAAAACTGTTCTGGCACCAAAAGTAATGATAAATGTTAAGTGTAATAGAAAATTAAAGCAAAGAGCCATTCAGCTTCAGTCTCTACATACCATGAATAAAACATTAAAACATCACATGGAGAAGTTTACATGGTGATTGTTCACCTGCAGTACTGTGGACTTTTAACATTTTGTCCCCTTTTCAGTGAACCAGAGTAAAAATATTCATCTACCATAACTGTTATTTGCTGGGTTTTTTTATTGTTGTTGTTTGTTTGTTTTTATTTTTTGGATGGTAATATTCTATTCTATCCTTATGACACTATTGCAACCAAATTGGCTTTACCATCTTGGCTTTAGTAGGTATAGAAGACAATGGATTACCATCTTTATTGCTGTAATGTGTTAAGCATTATATGCTAGTAGTATCTAGTTTAATTGTTTCAGGTGGAAAGTATTCTTTGAGTTTCCATTTTGAATGTGTTTGGACTAAACAAACAATAAACTACTGATGTCTGCAGCATTTTATCTATGTCCCTAATTTAATCTATAGGTTTGTGTTCTGAAATATTTTCTCCCAGTGGCATTTCACACAACCTCAGTAAAATAAGGAATTGTTCTAAAATCAACTGATTATTATTTGTGAAATTTGATACATAAATTATTTAAGTAAGACTTGAACATAATTACTTGAACTGAGATAGATCCCAGTTCAGTTAGATAGCTGATAAACAAGATAGAGAATGTTAGACCAGAATAATAAGTGGTGAGGAAGGTAAGAAGCAGACTACTAAACATTTATTTATTTGTTTTTAATAATCTTGGGTTTTCCAAAGGATTGCTACTTCATCTCAGAAGGAAGAGAGGATGGGAAGATCGAGGTGATCTGAAGTTATGGACATGACCAGTTCAGCAATTGGAACAAATTTGTGAAGCTCTAAAAGAATATTAAAAGGGAAAAGAATCATTCAGTCATAATTAACAAATATATTCTTCAAATGAAAAATAAAATCATAAGGCATATGTAATTTTAGAACTTGAGACTTTTACTTTGTTAACAGGGATAGTACAAGTGAATTTTTCCTGATATATTTATAACACTGTATGAAGATTCCGTAAATCAATCTTTACTAGTTTGTACTGGAGAAAAGCTAGACTGTTATTCAAGTACTTTTAGGAAGTAAGACTTAAGATTTTTTAAGTGTCTATTAGGCTCACTTTCAATTATGATGTATAATAACATTTAATTTTATGGCTATGGAAAAACATTCAGAAGGGATAAAATGTATGTACCATACTATATTGAAAACAAATTTGAAGAAGTAAAATATCGTTTGGTCCAGGAAATATGGAACAAAATATTTGAAAGTTGAACCACACATGATGCTTCGTTTCAATTGTTATATAATATAGTCTTTGTATCAAGTAAATGAAAATGTAATGAATAGATGTTCATATTTTTTCTTCAGGATAACTTGCTCATCATAATTTATATTTCAACTTCAGGTGAATACTTGATTTTTTTTTTTTTTTTCCTTTTCAGTCTGTTTTCATAAGACTTTCTAATTATTGTCTTGATCATTTTAATGCCAGAATTCTAAAGTATCTTAAATGACTGGGTAAATGAATTATGTTTTATTATGTTCTGAAAGATTTCCCTTCATAAAAGATATGAGTAGTTTAATAGATCATAAAAGATGTCAGTAGTTTTGTTTAAAGCCATTTGCATAGTTAAGTCAGAATTCCTTCAGTTTTCAAGGTATTTTTGACAATTGAAGTCTTCCAATCTGTTTATGTAGTATGTAACCACACCTTGTACTTAAGAATTAATAGGAAATGAAATTGGTTTTTAGCATTACCAAATACTGGGCAAAATACTATAAGTGAGAGTTTAGAATTAAACATTCACAGTAAGATTACTACTCTTGTCCCTGATCTCCTAAGTTTTGATAAAGCTGGCTGCCTACTTGGAATGCTTTCAGTTTTATGACAATAAACTCATCACCCCATAACCACCACCACCTGCCCCCTACACACATACCTATCCTTTCTGTCCTCAGCCTCTTTCTCCACAAGTTTTCTCTGAATGGTTTCATTTAGGCCAGGAATTACCTTAGCTTCAGTATATTGTCCATTCAGTAAATTTCATGTAGTGTGATGATAAGAAGTGGGCTTTGAAGATAGCCTGGCCTTGAATGGGAACTCCACCATTCAGTGGTTAGCCATTTTCTGTGCTCCTGTTTAACTCATTTGTAGACTGAGGAGGAGGAGTGTGAGGATTCAGTGAGTTAATACGTGAAGCTCCTGGAACAGTGTATGGGGCGTTCAGTTAAGTGTTGCCTGTTACTTTTTTTTATACAGTTGAATTTCTACTGTCTACTGATAATTATGTTTCAAACATTTCTTTTTTTAATCCTATTTTGCCTTGTCCCCTTTTAAAGTCCTGGTGGTGGTTTAGTTGCTAAGTCATGTCTGACTCTTGTGACCTATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATCTTCCCGACCAGGGCTCCTGCATTATAGGAAGATTCTTTACCAACTGAGCTATGAGGCAAGCCCTTTGAAATTCAAAATTCAGAAGTCCAAAGCCATGCTTCTCTAAGTGGTGTGCATACCTAATTCTGTGATAGTGAACATC EMBV3_30779 GGCTGCACCTAAGCCAGTTCAACAGCATGAGCGCCTTGCATGAGATCTACTCCTACATCA Gene GeneID:531240|PLXNA1:XM_002697150:85_cdna Constitutive 0 NULL GeneID:531240 22 GENE PLXNA1 NULL plexin A1 EMBV3_16238 GTGGGAAGAATTTGAAATGTGCCCCAAATGCCTGGTCTGGTCAGTGTCACAGATGATATA Gene GeneID:281131|DSG1:NM_174045:61_cdna Constitutive 2 NULL GeneID:281131 24 GENE DSG1 NULL desmoglein 1 EMBV3_24661 GTGCACAGGCCTTGGAGTTGAAGGTAACTGGCTTCCTTTACAGACCCCTTATTTTAGAAG Gene GeneID:327689|CPSF2:NM_175808:139_cdna Constitutive 3 NULL GeneID:327689 21 GENE CPSF2 NULL cleavage and polyadenylation specific factor 2, 100kDa EMBV3_25910 CCAGCCTGTTGCCATGTCCCTCTCAGCAGACAAGTTCCAGGTCCTCCTGGCAGACTTAAA Gene GeneID:616960|COMMD4:NM_001040597:139_cdna Constitutive 0 NULL GeneID:616960 21 GENE COMMD4 MGC152167 COMM domain containing 4 EMBV3_02232 GCGAGAAGCAAGTCTCATTTTGGGTGTAAGGTGGGTCTCCTTACTTAGCAACCAAAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05282 CATCTACACCTGCCTCAGGGAGCTCTTGCAATCTCAGGATGTGAAGGAAGATGCTGTCCT Gene GeneID:615119|LOC615119:XM_002697762:295_cdna Constitutive 0 NULL GeneID:615119 24 GENE LOC615119 NULL similar to Uncharacterized protein KIAA0427 EMBV3_24229 ATGTCCAGCGTTCGCGCCGCCAACAGCGAGGAGCCTCCATCGACCTAGAGAAGACATCCC Variant GeneID:618468|SPAG4:NM_001076507:1345_cdna 855^930 1 EMBV3_02482 GeneID:618468 13 GENE SPAG4 MGC133822 sperm associated antigen 4 EMBV3_27538 TCACCTTCGAGTTTGCTCAGAAGTGGACAGAGCCCCAAGTGACACCTACTGATGACTCAG Gene GeneID:768058|ACY1:NM_001077115:337_cdna Constitutive 0 NULL GeneID:768058 22 GENE ACY1 MGC127073 aminoacylase 1 EMBV3_16951 TGTGGTCAGTGTGTGTGGCCACCTGTACTGCAGGCCCTTCATTTCTGTTGGCTAAAGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16555 AGATATGATCTATGTCTCTGGGGGCTTTGATGGAAGCAGGCGCCACACCAGTATGGAGCG Gene BVT0102_121156 + 0 NULL GK000016.2:55491593-55504721 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069664 TCONS_00069662 TCONS_00069665 TCONS_00069663 TCONS_00069666 1 XLOC_042025 Coding TCONS_00069663 XLOC_042025 Coding Coding - 16:55494729-55504014 - TSS51898 783 2 TCONS_00069663_5 163 6 0.916307626023266 0.00097554595192598 0.0013923819973639 0.00163465421959823 0.00178818725012039 0.00272051020195198 0.000455095006885678 0.000366632009675491 0.00242602269184832 0.00171415289659425 3.60235667234647e-26 0 9.57815855531716e-05 0.000410345172022342 0.000336712974056246 8.76095179479268e-05 5.39141394979169e-13 2.08726934072242e-05 1.18581003413924e-148 0.000686916741956087 0.00184361624001819 0.000767486516065481 3.89401665986148e-05 0.0003224465755856 6.56279660683286e-05 0.00122543304393976 0.00117429832079939 0.00122810077260808 4.87610643625411e-05 4.32505189429616e-05 2.30354280354083e-05 NM_021633.2 KLHL12 Homo sapiens kelch-like family member 12 (KLHL12), mRNA. 0.0 1012 89.99 0.955300127713921 TCONS_00069663_5 sp|E1B932|KLH12_BOVIN KLH12_BOVIN Kelch-like protein 12; 1e-114 341 100.00 0.993865030674847 6 coding 1 1 1 1 -0.0156122435032483 0.899688618668428 0.0412039058115005 0.558123645999419 CTTCTAGTTCATGTGGCTGTTGGGAGGGAGCCAACGAAGTGCTTCTGGTGGTCGGCGGCTTTGGAAGCCAGCAGTCTCCCATCGATGTGGTGGAGAAGTACGACCCCAAGACGCAGGAGTGGAGCTTTTTGCCAAGCATCACCCGGAAGAGACGCTACGTGGCCTCGGTGTCCCTCCACGACCGGATCTACGTGATCGGCGGCTACGACGGCCGCTCCCGCCTCAGCTCCGTGGAGTGTCTGGACTACACGGCAGACGAGGATGGGGTCTGGTATTCAGTGGCGCCGATGAATGTCCGGCGCGGCCTGGCTGGAGCCACCACCCTGGGAGATATGATCTATGTCTCTGGGGGCTTTGATGGAAGCAGGCGCCACACCAGTATGGAGCGCTATGACCCGAACATTGACCAGTGGAGCATGCTGGGCGACATGCAGACGGCCAGGGAAGGTGCCGGCCTCGTGGTGGCCAGCGGGGTCATCTACTGTCTAGGAGGATATGACGGCTTGAATATCTTAAACTCAGTTGAGAAGTATGACCCCCATACAGGACACTGGGCTAATGTCACACCAATGGCCACCAAGCGCTCTGGTGCAGGGGTAGCCCTGCTGAATGACCATATTTATGTGGTGGGGGGATTCGATGGTACAGCCCACCTTTCATCTGTGGAAGCCTACAACATTCGCACCGACTCCTGGACAACAGTCACGAGCATGACCACCCCGCGGTGCTACGTCGGGGCCACGGTGCTTCGGGGGAGACTTTATGCAATTGCAGGGTGAGGGG TCONS_00069666 TCONS_00069666 TCONS_00069666 TCONS_00069666 TCONS_00069666 s 5' 0 TCONS_00069666 TCONS_00069666 TCONS_00069666 TCONS_00069666 TCONS_00069666 s 5' 0 EMBV3_02765 CAGAAACTCTATGAAAACAAGTCATTCCTCTTCCTGGGCTGTGGCTGGACTGTGGATGAC Gene GeneID:100336558|LOC100336558:XM_002699216:41_cdna Constitutive 0 NULL GeneID:100336558 29 GENE LOC100336558 NULL hypothetical protein LOC100336558 EMBV3_33131 CCTTAGTAGATGGGGCCAGGGGCCAGGGGGAAGGCAGAGGAAATGTTCTTCCAAAACTTT Gene GeneID:539629|MECP2:XM_002699713:95_cdna UTR3_Alt 2 NULL GeneID:539629 X GENE MECP2 NULL methyl CpG binding protein 2 (Rett syndrome) EMBV3_17837 CGGGCCAAGAGGGGCAGGAGCTTTTTTCATTTCTTCCTCAGCTGGTAACTCAGGGTTCAT Gene GeneID:533908|RPS6KA1:NM_001083722:221_cdna Constitutive 0 NULL GeneID:533908 2 GENE RPS6KA1 MGC139400 ribosomal protein S6 kinase, 90kDa, polypeptide 1 EMBV3_25641 GTGTGAGTGGGTCAAGACAAAGGCAGGCATGTGCCAGGTCCAAATTAAACCCCGATTCTG Gene BVV0102_272267 + 0 NULL GK000011.2:101705897-101727776 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029187 TCONS_00029178 TCONS_00029179 TCONS_00029183 TCONS_00029189 TCONS_00029186 TCONS_00029177 TCONS_00029182 TCONS_00029176 TCONS_00029181 TCONS_00029185 TCONS_00029180 TCONS_00029190 TCONS_00029188 TCONS_00029184 1 XLOC_015686 Coding TCONS_00029186 XLOC_015686 Coding Coding RAPGEF1 11:101726387-101863134 j TSS20350 4352 1 TCONS_00029186_3 1078 25 0.96835739253799 0.00352027454342341 0.00159519373753185 0.00314876639800404 0.00332623015559548 0.00125885673901379 0.00132171250809229 0.00260585135940549 0.00155244547229786 0.00180925721272286 0.000452399751667794 0.00047800859353744 4.31750137359225e-06 0.000499391137837829 0.000210462539244428 0.00106642270840058 0.00233530874591879 0.000301858758291121 0.00283656297688901 0.00137769347301743 0.00314629306343607 0.00200578258428473 0.000741341807382212 0.00127510341685661 7.1948807527131e-28 0.00304080236703271 0.00229273031594465 0.0014555001686484 0.000820305739075119 0.000351731030909907 0.000419299376678012 NM_001205872.1 RAPGEF1 Bos taurus Rap guanine nucleotide exchange factor (GEF) 1 (RAPGEF1), mRNA. 0.0 5781 99.94 0.737362132352941 NM_198679.1 RAPGEF1 Homo sapiens Rap guanine nucleotide exchange factor (GEF) 1 (RAPGEF1), transcript variant 2, mRNA. 0.0 4190 89.01 0.736672794117647 TCONS_00029186_3 sp|Q13905|RPGF1_HUMAN RPGF1_HUMAN Rap guanine nucleotide exchange factor 1; 0.0 1949 92.73 0.980519480519481 2 coding 0 0 0 0 -0.0353091344840073 0.760942432034838 -0.0289309952285759 0.669839105886103 CGGGCGGTGGGTGGTCGTCCTTCAGGCGGCGAACGGAGCCGAGCCACAATACTCTCAGCGTTCTCATCTCTCCTCCTTCACCATGAAGCTGAAGGACAAATTCCACTCGCCCAAAATCAAGAGGACGCCATCAAAGAAGGGAAAACCAGCCGAGGTGTCTGTGAAGATTCCAGAGAAGCCCGTGAACAAAGAGGCAACAGACAGATTTCTACCAGAGGGCTACCCTATCCCCTTGGATCTGGAGCAGCAGGCAGTAGAGTTTATGTCCACCAGTGCTGTGGCTTCCAGGTCTCAAAGGCAGAAGAACCTGAGCTGGCTGGAGGAGAAAGAGAAGGAAGTTGTCAGTGCCTTGCGCTACTTTAAGACCATTGTGGACAAAATGGCTATTGATAAGAAGGTCCTGGAGATGCTCCCAGGGTCCGCCAGCAAGGTGCTGGAGGCCATCTTACCCCTGGTGCAGAGCGACCCTCGAATTCAGCACAGCTCAGCCCTCTCCTCCTGCTACAGCCGAGTGTACCAAAGTCTCGCCAATCTCATCCGTTGGTCTGACCAAGTGATGCTGGAAGGCGTGAACTCAGAAGATAAAGAGATGGTGACAACTGTGAAGGGGGTCATCAAGGCCGTGCTGGATGGAGTGAAGGAGCTGGTCAGACTCACCATCGAGAAGCAGGGGCATCCATCTCCAACAAGCCCTGTGAAACCCAGCTCCCCAGCCTGCAAACCTGACAGCCAGTCTGAGCTCCCCCTGACGGATCGAGAGATGGAGATACTAAACAAGACGACCAGCCTGTCACAGTCAACCGAGGGGCTCCAAGACTCTATGGACGAAGAGGTTGCACCCCCCAAGCCCCCCTTACCTGGCATTAGGGTGGTTGATAACAGTCCTCCACCAGCACTGCCCCCGAAGAAGAGACAGTCGGCTCCGTCCCCCACGCGTGTGGCCGTTGTGGCCCCCATGAGTCGAGCCACCAGTGGCTCCAGTTTGCCTGTTGGAATTAATAGGCAGGACTTTGACGTGGACTGTTACGCACAGAGACGGCTGTCGGGAGGCAGCCACTCGTACAGCGGTGAGTCTCCCCGCCTGTCGCCCTGCAGCAGCATCGGCAAGCTCAGCAAGTCGGACGAGCAGCTGTCCTCTCTGGACAGGGACAGCGGGCAGTGCTCCCGGAACACAAGCTGTGAAACACTAGATCATTACGATCCTGACTACGAGTTCCTTCAGCAAGACCTCTCCAACGCAGACCAGATACCTCAGCAAGTGGCCTGTAACCTCAGCCCGCTGCCAGAGTCCTTGGGGGAGTCTGGGTCTCCCTTTCTTGGCCATCCTCTCCAGTTGCCTCTGGGCAGCTGTCCCCAGCCAGATGGGTCCTCAGCCCCGGGGCAGCAGACGGACGTGCCGCCAGCCCTGCCCGAGAAGAAGCGCAGGAGTGCAGCCTCCCAGACCTTGGACAGCTCTGGCTGCCGGGCGTCCTACGAGCGACACCCCTCACAGTACGACAACATCTCCGAGGATGACCTGCAGAACCCAGCCTCCGTCCAGTCCGTCCCCTTCACGCCCTTTGCTGCTATTCTTCCCTTTCAGCAAGGAGGTTCCTCAGCCTCTGTCGACTTCATGGGTGATTTCACTGTTTCTGAATCAACGGGTGACCCAGAAAAACCGCCACCTCTCCCCGAGAAGAAAAACAAACACATGCTGGCCTACATGCAGCTGCTTGAGGACTACTCGGAGCCACAGCCTTCCATGTTCTACCAGACGCCGCAGAAGGAACACGTGTACCAGCAGAAGAACAAGCTTCTCATGGAGGTGTATGGCTTCAACGACTCCTTCAGCACCGGCGACGCCGCACACGATCTCGCCCCGCCCCCCGCCCTGCCCCCCAAGCAGCGGCAGCTGGAGTCACCCGCGGCGAAGGATGGACACTCCAGAGACGCCACATCGGCCAGCTGTGTGCCCGGGAAGGAGGGCAGGGACAGCGGGGACAGGGCCCGGAAGTCACCAGACGCTCCAGAGGCTCAGTCAGAGGAGGAGGTGGACGAGCTCTCCCTCATCGACCACAACGAGATCATGGCGAGGCTGACCCTCAAGCAAGAGGGCGATGACGGGCCAGACGTCCGTGGAGGGTCGGGCGACATCCTCCTCGTCCATGCCACGGAGACGGACCGGAAAGATCTGGTGTTGTACTGCGAGGCCTTCCTGACCACCTACAGGACCTTCATCACTCCTGAGGAGCTCATCCAGAAGCTGCAGTACAGATACGAGAAGTTCTCACCTTTCGCCGACACATTCAAGAAGCGTGTGAGCAAGAACACGTTCTTCGTGCTGGTGCGGGTGGTGGACGAGCTCTGCCTGGTAGAGCTGACAGAAGAGATCCTGAAGCTGCTGATGGAGCTGGTCTTCCGCCTGGTGCGCAGCGGGGAGCTCAGCCTAGCACGCGTGCTCCGCAAGAACATTCTGGACAAGGTCGACCAGAAGAAGCTGCTCCGGTGCGCCAACTCTGACCAGCCCCTGGCGGCCCGGGGAGTGGCAGCCAGGCCCGGGACCTTGCACGACTTCCACAGCCATGAAATAGCCGAGCAGCTGACTCTGCTAGATGCCGAGCTCTTTTATAAAATAGAGATTCCTGAGGTTTTGCTTTGGGCTAAAGAGCAGAACGAGGAGAAGAGCCCGAACCTGACCCAGTTCACGGAGCACTTCAACAACATGTCCTACTGGGTCCGGTCGATAATCATGTTGCAGGAAAAGGCCCAAGACAGGGAACGGCTGCTCTTGAAGTTCATCAAGATCATGAAGCACTTACGGAAGCTGAACAACTTCAACTCCTACTTGGCCATCCTCTCGGCGCTGGACTCGGCCCCCATTCGCAGGCTGGAGTGGCAGAAACAGACCTCAGAGGGCCTGGCCGAGTACTGCACGCTGATCGACAGCTCGTCATCCTTCCGCGCCTACCGGGCCGCCCTCTCGGAGGTAGAACCGCCCTGCATCCCATACCTGGGGCTCATCCTGCAGGACCTCACCTTCGTCCACCTGGGGAACCCAGACTATATTGACGGGAAGGTGAACTTCTCCAAACGCTGGCAGCAGTTCAACATCCTGGACAGCATGCGGTGCTTCCAGCAGGCGCACTACGACATCCGGAGAAATGACGACATCATTAACTTCTTCAACGACTTCAGTGACCACCTGGCCGAGGAGGCCCTATGGGAACTCTCTCTGAAAATCAAACCCAGGAACATAACGAGGAGGAAGACAGAGAGGTGCCCACCGGACTCCATGCCAGCCAGGCCTAGGCGTGCGAGTGGGCCACCCCCTCCTGATTAGTTTCACATCACTGAGTGCCCACTGTTCCTGGGTTTGGGACTCGGGCAGGCAAACAGCAGGCTCGATCCAGGCTTAGCCCAGTTTCAACAGAACGAAAAGAGTGGAAGCAATCTCTGTTGACTATTTAAAGAAACAGCCCTGTCACTCTGAGTCCTTCATGGGCTTCTAAACAGTTTTTACTGAGAAGTGTCTGTCCTGTACACAGAGGGGAGGAGTCTGAAATGTCAGCTACGACCCCTCAGCAGTGATCCTTGGGCGGAACGCGTCACTTTATTATTTAAGGAATGTGTGTGTAGAGTCGCTGTTTATGAACAGTACTGTGTGTGGGGTTGGGTTTTAGTTTGTTCCCGCTTTTTTGAGTCCTCTCATTTCAGCCTCCCTCCCACCTCCCTCCCGGCCTGGCTGGCTCTGCTGATGCTGCCGCGTGTGCGGAGCCGGGCCTCCGTGGCTCAGGACCCAGGACCATGTGGACTGTGGTTCCCACAGCCATGACCTGGGGTGCAGGGGGGCTTTGCCACCCCTCACTTCAGAGCAGACCGGGCACGCCGTGCAGGTGGGCCAGGTGACCCCCCCTGCGTGAGGACAGCAGGTGTGGTGTGTGTTTTAACTTATTGGGCTCAGGGTTCCCCACATCCACCTCCTGGAGACCCGTCCCTGGCTCTAGGCGCTGCCAGCCTGGCTGTGTGGTTTGTCTGGCTTAGGGGCCAAGTCAGGTGTACGAGCCAGCCTGTGTGACAAAGACACCCTCGGGAGGATTCAGTCCCCTATGGGGGTCCCTTCACACCTGCGGGTGTGAGTGGGTCAAGGCAAAGGCAGGCATGTGCCAGGTCCAAATTAAACCCCGATTCTGAGCAGCGCCTCCCCCCACCACCTCCCAGTGTTATTACATTGTAATATATCCCCAACTAGACTAACCGGCTGATCGTGGCATCTTCCCGCAGACATTTCAAACCTGTAACTTTTATATGAAAGGAAAATAAACACAGATGAAAGCCGCGGCCGCCTGTGTGTGCACCGCATGCCGCGTGTCAAN EMBV3_14939 TTTTTAAGTGCAATACTTGACCTGCCGGCTTCCCGCTGCCTCCGTTGCGCTCATGCAATA Gene GeneID:100297361|LOC100297361:XM_002689161:184_cdna Constitutive 0 NULL GeneID:100297361 7 GENE LOC100297361 NULL similar to hyperpolarization-activated, cyclic nucleotide-gated K+ 2 EMBV3_24031 GGCTGTGCTGGGGTTTTAGTTGCGGCATGTGAGATCTTCATTGTGGCGTGCGGAATCTTT Gene BVV0102_159054 + 0 NULL GK000009.2:33176527-33570580 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42339 GTTCAGTTTCTTCTGTGAGTTGTGCTTATTCAGTGTTTACTGAGGAAGATGGTTTGACTC Gene BVV0102_108419 + 0 NULL GK000010.2:62920661-63537087 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12551 CCCATTGGTTCTTGGCTCTGTGAACATGAAGGGGCCTGCCTAATTACAACCCTGTTATCC Gene GeneID:535872|SLC16A2:XM_002699994:96_cdna UTR3_Alt 2 NULL GeneID:535872 X GENE SLC16A2 MCT8 solute carrier family 16, member 2 (monocarboxylic acid transporter 8) EMBV3_10993 CTGCCAGAAGCTAGGAAGAGACAGGAAAGGGTTCAGGAGAACAGACTGCAGAGGAAGCAT Gene BVV0102_141162 + 1 EMBV3_23368 GK000024.2:57333274-57344498 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17517 GTAAATGGGAGGCTTATGATGCTACCTATCTTGTGAAGTCCTATCCAGGTCCTCAGCTGG Gene GeneID:535653|ESD:NM_001076065:163_cdna UTR3_Alt 3 NULL GeneID:535653 12 GENE ESD MGC139609 esterase D/formylglutathione hydrolase EMBV3_18147 CCCTCCGTGTTTCCAAACCCCAGAGCAAGACTCAAATAAATAGCATAGAGGATCAGAAGG Gene BVV0102_148570 + 0 NULL GK000015.2:82377891-82413098 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066337 1 XLOC_041051 NonCoding TCONS_00066337 XLOC_041051 NonCoding NonCoding - 15:82380672-82382663 - TSS50080 1991 1 0 0 0 0 0 0 0 0 0 0 0 1.14976741818138e-06 0 0 0 0 0.000397964899813441 0.000420267664466938 1.26021387582171e-05 0 0 0 0 4.60775839864662e-06 0.00104120092501254 0 0 0 0 8.29015410996307e-05 0 0 noncoding 0 0 0 0 -0.0437822766901715 0.765019326829469 0.0180877846136347 0.715601780845152 CTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGGGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGGTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGTGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGCGGTGAGGAGCCTTCCTCTATAATACAGGTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGTGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGGTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTCAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTAATACAGGTCAGGGGCGGTGAGGAGCCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCTTCTCTATGTCTTCTCTATAATACAGGTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGTTTAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGTGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGAGGTGAGGAGCCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGCCTTCTCTATAATACAGTTCAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGCGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGCCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGTCGTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGGTTAGGGGTGGTGAGGAGTCTTCTCTATAATACAGTTCAGGGGAGGTGAGGAGCCTTCTCTATAATACAGTTCAGGGGCGGTGAGGAGCCTTCTCTATAATACAGGTCAGGGGCGGTGAGGAGCCTTCCTCTAGAACAGTTCTGGGACAGAGCGTGTTCAGAACAAGAACAGCCAATGACGTGGAAGAAGAGGCAGAGATCAGGGCCGAGAAATCTCCAACAAAGCAAAGTTAAAATTTAAATAAAAATTATTTGCTGTCTTGTGTGTAGATTGGTCAACCTGATTTAAAGACAAGAAGTTCAGGACAGAATATTTTTATACCTTGCTGACTGAACTGCTGACTCCTGGAGTTCTTCAGGATTTGGAACCTTAGTTTTACATCAAAGGAAGAACAGTTAAAATGAATTGGAATTAAAAAAAAAAAAAAAGAAAATTGAATCTGTACCCTCCGTGTTTCCAAACCCCAGAGCAAGACTCAAATAAATAGCATAGAGGATCAGAAGGAAAAAATAAATCCAAAAATGAAACA TCONS_00060334 TCONS_00060336 . 3' 2779 TCONS_00060334 TCONS_00060336 . 3' 4769 EMBV3_08631 AAGACCGTTGAGCAGCTGAAGCTGGAGGTGAACATCGACCGCATGAAGGTGTCGCAGGCA Gene GeneID:618470|GNG8:XM_002695179:834_cdna Constitutive 0 NULL GeneID:618470 18 GENE GNG8 NULL guanine nucleotide binding protein (G protein), gamma 8 EMBV3_29186 GGACTCCCCCCATAATTAAAATGCCTTTAGGAAATCAAAAAGTAGGGTAGATTCCACTTG Gene BVV0102_030218 + 0 NULL GK000009.2:4702138-6097005 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25926 AGGCTTCGTGCGGTCAGTGTTGTACCAAATCCAGTGTTAGGAAGTCGGACACAGCGTGAT Gene GeneID:535231|ERG:NM_001102183:66_cdna UTR3_Alt 2 NULL GeneID:535231 1 GENE ERG MGC143243 v-ets erythroblastosis virus E26 oncogene homolog (avian) EMBV3_10855 GACCTGTATTTGGGGAATCAAAGTGGAGAGAACAGAAATTAAGGATGTGCGCCTGCCGGC Gene GeneID:537633|NPHS2:XM_002694162:579_cdna Constitutive 0 NULL GeneID:537633 16 GENE NPHS2 NULL nephrosis 2, idiopathic, steroid-resistant (podocin) EMBV3_02802 CACGGGTACAACCTGAAGTCTTGGACTGCTCCTTCAGGCACCACTACCTGTGTTCCTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31762 CTGGATCTCACCTTCCACCTCCTCCGAGAAGTCTTGGAAATGACCAAGGCCGATCAGTTA Gene GeneID:280755|CRH:NM_001013400:4_cdna Constitutive 0 NULL GeneID:280755 14 GENE CRH MGC159486 corticotropin releasing hormone EMBV3_41587 TCCATACGTGCATAATTACAGTGACATTTAAGAAATTCCCAGTGGTGGCCTGCCTAAGAC Gene GeneID:507478|PHAX:NM_001166562:34_cdna UTR3_Alt 2 NULL GeneID:507478 7 GENE PHAX RNUXA phosphorylated adaptor for RNA export EMBV3_07835 TGGTTAATGCACCAGGCCACTTTCTGACACACTCTGGGACACGTCTGCAGTCAACACTGG Gene GeneID:519030|SPIRE1:XM_002697807:427_cdna Constitutive 0 NULL GeneID:519030 24 GENE SPIRE1 NULL spire homolog 1 (Drosophila) EMBV3_05572 GAGAGAAGTCATTTGCTCAACTTTGGAAATGTTATGGTGTGTTTGGGTGGAGAAGCCTGC Gene GeneID:787607|PPP2R3A:NM_001102346:87_cdna UTR3_Alt 2 NULL GeneID:787607 1 GENE PPP2R3A MGC152251 protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha EMBV3_40057 CTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTTTTCCATCTTTGTATCTAGCACCAT Gene GeneID:791042|MIR29B-2:NR_030965:137_cdna Constitutive 0 NULL GeneID:791042 16 GENE MIR29B-2 MIRN29B bta-mir-29b bta-mir-29b-2 microRNA mir-29b-2 EMBV3_13509 TTGTTTGGTGCAAATGCCAACAGGAAGTTTTTGGACTAAGCCAGCAGGAGGTGCGTGACG Gene GeneID:287017|ATP6V1E1:NM_174810:13_cdna Constitutive 0 NULL GeneID:287017 5 GENE ATP6V1E1 NULL ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 EMBV3_02536 TGTGGGCATCTGCACGCCACAGGGCATCTGCAGCGCTTAATGTTACTCACCTTTATCAGT Gene GeneID:530850|LOC530850:XM_002690637:3_cdna Constitutive 0 NULL GeneID:530850 10 GENE LOC530850 NULL similar to TCRA protein EMBV3_13391 CACCCTGAACAGAGTATCTTTTTTTAAAAACCACGCCATTCCTTGTCTCTTCCGGTCAAG Gene GeneID:540817|MOBKL2B:NM_001046491:14_cdna Constitutive 2 NULL GeneID:540817 8 GENE MOBKL2B MGC137483 MOB1, Mps One Binder kinase activator-like 2B (yeast) EMBV3_39680 AGCCTCGTTGCGCCTTCCACACTGTGCGCTGGTTCAACTGCACCAGTAACTGTTTTCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03566 CGTTTGTGGCGATCAGGACTACTGTAAGCGTCGGCTGTGTCAATGTGATAAAAGAGCTGC Gene GeneID:615045|LOC615045:XM_002685729:451_cdna Constitutive 0 NULL GeneID:615045 2 GENE LOC615045 NULL similar to phospholipase A2 group IIA-like EMBV3_33624 GCTGGAATCTGTCTTCTTATCATCATTCAGGTACGGAGTTTGAGGGCGCAGTCATAGCTC Variant GeneID:614128|SEC61A2:NM_001046524:11_cdna 571^724 2 EMBV3_10583 GeneID:614128 13 GENE SEC61A2 MGC137488 Sec61 alpha 2 subunit (S. cerevisiae) EMBV3_15714 GCAATGCAGCATGCTGAAATCTACTACAAAAAGTGGAGGCCATTCTGCTTGAAGTTTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35075 AGCAGGCAAAATAGTATCGAGGCAGAAACTGGAGCTGAAAACCACGGAAGCAAGCGTGAG Gene GeneID:100300493|LOC100300493:XM_002688124:25_cdna Constitutive 0 NULL GeneID:100300493 6 GENE LOC100300493 NULL similar to microsomal triglyceride transfer protein EMBV3_02878 TATGACTGGAGGGACATCGTCAAGTACATCATGGACCACCATGACATAGAGATTGCGGGC Gene GeneID:789572|AGXT:NM_001102355:41_cdna Constitutive 0 NULL GeneID:789572 3 GENE AGXT MGC179475 alanine-glyoxylate aminotransferase EMBV3_21867 ACAAACCATTGTTCTTCAATGTTATCTTCCCTTGAGGCACAAGTTGCTTCAAGAATGGGG Gene BVV0102_101811 + 1 EMBV3_17898 GK000015.2:20526350-20567723 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063508 1 XLOC_038235 NonCoding TCONS_00063508 XLOC_038235 NonCoding NonCoding - 15:20531049-20532222 - TSS47251 1173 1 TCONS_00063508_2 67 1 0 0 0 0 0 8.41804584575202e-06 0 0 0 2.01794495939362e-05 4.20919678633618e-05 1.95156464313867e-06 0 0 0 0 0.000315227748743172 1.41537031235886e-05 2.13903888786661e-05 6.11332091243969e-06 0 1.55279953265586e-05 0.000113872141183259 0.000109494202624816 0.000385886438959771 0 0 0.000119880315808212 8.18855975709875e-06 0 0.000153765477553512 XM_002692971.2 ZC3H12C PREDICTED: Bos taurus zinc finger CCCH-type containing 12C (ZC3H12C), transcript variant X1, mRNA. 0.0 2116 100.00 0.999147485080989 NM_033390.1 ZC3H12C Homo sapiens zinc finger CCCH-type containing 12C (ZC3H12C), mRNA. 9e-167 590 72.22 0.978687127024723 0 noncoding 0 0 0 0 0.0146668034550016 0.922952210382184 -0.0277779607756785 0.552702278107204 AGTTTACATGCTGTAAACTTTATTCTGTAAAATTAAAAATTGTGACTAGTATAATTGTGAGTGCACTTGTTGTATTGTGAATCTCTTTATAAGAAACAAAATGTATACCTGCTTTCTCTATCCAAACCTCTAGTATAGATTTAAGACACCTTAGGACTGTCCTCAGTGAAATACTCTTAACAGGATCATGTATGGTTTTAAATTCATTGGAGTACACCACTGAGCGTGTTCATTCACAGCGCTTTGTAAATGATGTTAACATCATAAAATCACATCTGTTGGAATATTTTGAATATTGTCATCCACTTAAGTTGCTATAGTTTCTTTTAAGATTGGAATATAACTCTAGTTTTAACGGGTGTTTACGGTTTTAAATATTTGTGTTTTTTTTTTTTTCTTTAATGCCCTCTGTTAACCTGCTTTTTGCTTCTGTTACAATAACACTTTGTTATGTTGGGAGTGGCTTTTTCCCTAAAGCTCTTAGTCTTTCAGATTGAAAAACAGTTTAAGGTTTTGATCACTTGACAATTTGGCAGTAAAAAAAGAAATTCTGTGCGTGTTTCAGTTCAGTTTTATAGATAGTGTAAAATTTCATTTTTTAAACCATATACCGAATTTGCCAATTTTCTGTCTAGATATTTCAGATGAATAACAAATTGTTCATTTAAAGCTTTTGACCCCATTCTTGAAGCAACTTGTGCCTCAAGGGAAGATAACATTGAAGAACAATGGTTTGTTTTTATAAAGAATGTGTTTTAAATATGAAGACTTTCTTCATTTGGGGGAAATTATAAACATCTCATCTAATACAGAACACCCGTCAACGTGCACACTTCCACAAACATGCGGACATGGCATTGCCAGTGAACCCAGTTATGGACTTTATCTTTTCCTTCTAGGTTTTATCCTCCCAAATCAGAGTCGTTTGCTGAGAGTAGAAATTCCAATTTGATCCTTCAAACTTATAAGAAAACAAGGCGAAGAATATGTTTAGAATAACCATCTGATGAATTCATGTGATTCTGTTTATTCTATGTCTGTTCTGTGTGTTTGTGTAGTGGGATTTTTACAGCTCCAAAAAAGCAGTATTTTAGACCTACCGGAAATCCATATCAAAACAGCTATATGATTCTGCCTCTGAGAAAAAAAAATATATATATTAAAAAACTCAGT TCONS_00058455 TCONS_00058456 TCONS_00058457 TCONS_00058458 . 3' 1501 TCONS_00058455 TCONS_00058456 TCONS_00058457 TCONS_00058458 . 3' 2673 EMBV3_43686 TTTATCAAGAAGAGGCACCCAGGGCGGCCGGCAGAGGGCACTATTTTGCCAGGGACAGTA Gene BVV0102_439811 + 0 NULL GK000005.2:75464713-75509445 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02073 GGCCTGGAGAAGATTGCGCTGGACTGATTAATTTTGGGCAGTGGAACGATTTCCCATGTG Gene GeneID:504741|COLEC12:NM_001101843:38_cdna UTR3_Alt 2 NULL GeneID:504741 24 GENE COLEC12 MGC155255 collectin sub-family member 12 EMBV3_24966 GAATCCCCACCTCTGTGGTTTGTTGGTCCTGGTGTCATTTTCCATCAGCCTTTTGAACTC Gene GeneID:787041|LOC787041:XM_002688794:190_cdna Constitutive 0 NULL GeneID:787041 7 GENE LOC787041 NULL similar to olfactory receptor, family 7, subfamily E, member 24 EMBV3_09941 CAATAAGAGTCACCTCTGGAATGAGGAGGAAGTGTGGCGGATGGAGATCTACCTGTCCCT Gene GeneID:504235|STEAP3:XM_002685438:46_cdna UTR3_Alt 2 NULL GeneID:504235 2 GENE STEAP3 NULL STEAP family member 3 EMBV3_02994 AGAAGCAAGTCCGACCCATGCTGCTGGTTGATGATCGGGCTCTACCTGATTTTAAAGGAA Gene GeneID:100337099|LOC100337099:XM_002697760:289_cdna Constitutive 0 NULL GeneID:100337099 24 GENE LOC100337099 NULL haloacid dehalogenase-like hydrolase domain-containing protein 2-like EMBV3_01523 TCTGAGCCTGGTCCTCAAGGGGAAGGTGGAACAGAAGCTGCGTTGGTACTTCAAGCTCTA Gene GeneID:282243|GUCA1A:NM_174546:210_cdna Constitutive 0 NULL GeneID:282243 23 GENE GUCA1A NULL guanylate cyclase activator 1A (retina) EMBV3_40077 AGGTACCTGGATTGTGCCCAACTGCTGAGATCTCTTGATAAGCCTTTTGCATATCTGGGA Gene BVT0102_113279 + 0 NULL GK000016.2:72596974-72622939 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42632 TGCGCACGCCCGGAGAGCATCACTGTGAGACTGAATTGTTTTGGTTAAGTTTCCATTCAG Gene GeneID:617615|CLN6:NM_001109984:275_cdna Constitutive 0 NULL GeneID:617615 10 GENE CLN6 NULL ceroid-lipofuscinosis, neuronal 6, late infantile, variant EMBV3_21344 AATGCTGCGTCTTCCTCTCCCTCTGCTCCCCACAATTCTACTTTCTCTTTCCACCTCCAG Gene BVV0102_218947 - 0 NULL GK000007.2:46282861-46454413 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213248 TCONS_00213238 TCONS_00213237 TCONS_00213239 TCONS_00216899 TCONS_00213245 TCONS_00213236 TCONS_00213244 TCONS_00213235 TCONS_00213243 TCONS_00213240 TCONS_00213249 TCONS_00213241 TCONS_00213242 TCONS_00213247 TCONS_00213246 2 XLOC_130413 XLOC_131372 Coding TCONS_00213242 XLOC_130413 NonCoding Coding FSTL4 7:46289504-46454451 x TSS159807 904 1 TCONS_00213242_3 100 3 0.994537606246893 4.44783894692863e-58 0.000288008567399111 8.90349807457871e-05 0.000182398769882672 0.000268591025503271 2.12102431610163e-05 3.05717563407207e-78 2.03844691329989e-158 3.94332093160688e-137 1.61475903281562e-255 2.28244933192143e-230 0 0 1.2031913057923e-05 0 1.88015935957198e-05 0 0 0.00124030235022721 0.000158443921920148 0 0 0 0 3.28949906708571e-14 1.15752657865248e-198 0.000812007675121126 8.93252472609132e-05 2.68506766628442e-05 2.70125402017955e-05 XM_613235.4 FSTL4 PREDICTED: Bos taurus follistatin-like 4 (FSTL4), transcript 0.0 890 100.00 0.544247787610619 NM_015082.1 FSTL4 Homo sapiens follistatin-like 4 (FSTL4), mRNA. 9e-96 354 77.08 0.501106194690266 0 noncoding 1 1 1 1 0.395094284606639 0.147805234996836 -0.222005625979087 0.105328408197546 ACCAACAGCTGAGGGTGAAGGTGGTTGTGGGCTGGAGGTGGAAAGAGAAAGTAGAATTGTGGGGAGCAGAGGGAGAGGAAGACGCAGCATTATTTCTGGAAATGCCAAATCAAGTTTGGAACTTCTTTGAGGCTACTTGTGACGGCAGGATGACATGTCTCTGACACAGTATCTAGTTTACATGGGTCCTGGTGTGACCGAGGCCTCAGCAATTTGCCCTGACTTGCGGTCTCTAGCGTGTGGGGCTTCTCTTCTCTGGGACCCACTGGCCTTCAGCTTCTCTCCACGGTGCAGCTCGCTTCCCCCAGGGTAGGGAGCAGGGAAGAGGAACACCTGCCCTGGGTCTTGGAGAGACCAGTCCAGCGCAAGAGAGTCAGGCATCCCAGTTGCTGTTCCTGCTTGGAAAACATGGGCTTACAACAAGTCAAATGGAAAGAAAAGCGAGAAGCAGCTGCAAAGGAGAAAATGAGGTCCAGAGCTCTCAGGCCAGGAGGGAGGGCCCCGCTCCTGGGAGCCCCCGGCTTCAGGCCATCCAGCAGGGTGAAGTCTGGACGGACCCGGTGTTAAAGAATGAGGATGCAAAGGCAACTGACAGAAGCGTCCGCCTGGAAAGCTGGAGCTCCTGGTTCCAGGGCGGCCCAGGTAACGTGGCGCGTAGCTGGGCGCACGATGATTCCTTTACACGGCAGCAGGTTCTCATTGCAGCTCAAGGCAGAAATCCTACATCCTAAAACCCACCCGATCTCTTTAGCAGCGCATACCTTACACTAGGAAACTTGCAAGGAGACCAGTGTTGAACCACAAAGCGAATACAGGTTTTTTGCTTTTGTCTGTAAAAATGTACAGGGTGCCTGCTCGGGACTGCTTCATACCTCGCCCACCCACACCACCGTGGTCCCCCCCT TCONS_00216903 r 5' 0 TCONS_00213223 TCONS_00213224 TCONS_00213225 TCONS_00213226 TCONS_00213227 TCONS_00213228 TCONS_00213229 TCONS_00213230 TCONS_00213231 TCONS_00213232 TCONS_00213233 TCONS_00213234 s 3' 6648 EMBV3_26078 AGCTTGATTCTTGGGTTGCTGCGCTCCTGGAATGACCCTCTCTATCACCTAGTCACCGAG Gene GeneID:280901|PRL:NM_173953:12_cdna Constitutive 1 NULL GeneID:280901 23 GENE PRL NULL prolactin EMBV3_10886 ACTTTAGGGTGAGTAAACGTTGGTTTTGTCAGAGTTATTTCAAGCAAGTGTTTGCATAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00950 TGCCCACGATTCCGCGAGCTCCTTGAAAGCCTGGATGCAGAGTGTGTTGAGAAACTCATT Gene GeneID:286881|SPLUNC2B:NM_174802:776_cdna Constitutive 0 NULL GeneID:286881 13 GENE SPLUNC2B BSP30B common salivary protein BSP30, form b EMBV3_03048 TGGAAAGATTTCAAAGTGGCTAAATCCTAGAGATGGCTACACTCTGGATGCCAGGTCTCC Gene BVT0102_102507 + 0 NULL GK000006.2:93758041-93865999 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210162 1 XLOC_128672 NonCoding TCONS_00210162 XLOC_128672 NonCoding NonCoding - 6:93811240-93811682 - TSS157669 442 2 TCONS_00210162_2 41 1 0 0 0 0 0 0 0 0 0 0.00142807865586347 0 0 0 1.29831826069747e-05 0 1.11000228975289e-05 0 0 0 0.000551609158098813 0 0 0 0 0 0 0 0 0 0 0 0 noncoding CTGAATTTCTCTTCCCTTGATTTATCTTCTTGTCAACTTTAAGGTTTAATTTACTACTATGGAAACTATAATTTTGGAGTCTGAAGTGGCTGAGAGAGGACTAAAATATATGGAATGGACTTTTTAAAACTGGAGAACTGAAGTTGCTGAGATTTCACTATGGAAAGATTTCAAAGTGGCTAAATCCAAGAGATGGCTACACTCTGGATGCCAGGTCTCCAAAGTTCCTTAAGTGATTATGCCAAAGATTGGCTTGAAGAATCCTGCCACCCCACTCCCATGATACCCCGCCCTCTGGTCATTGCTTAATATGGTTCTATGTACACTTGGTTTCAAGCCATGAGTGCACTTCCCTGCAGACCAGACTACCACTACCTAAACCCATCCTACATAGGAATTCTTGAGATGCTGCTTTTCCAGAGGAATAGTCTGAGCCGTGCTG TCONS_00203833 TCONS_00203834 TCONS_00203835 . 3' 53201 TCONS_00203833 TCONS_00203834 TCONS_00203835 . 3' 53642 EMBV3_05686 TCTGCATATGTCTCCAGTATGAGAGCAAGAATGTCACCAGGGGCCCACCTTCACATAGCC Gene GeneID:613696|PLEKHO2:NM_001076283:127_cdna Constitutive 0 NULL GeneID:613696 10 GENE PLEKHO2 PLEKHQ1 pleckstrin homology domain containing, family O member 2 EMBV3_41009 GCCATGGACCAAATGGTCACTTTACCCCGGTTGAAATGAGTTACGGTTGCAGCTTGATGG Gene GeneID:509423|PLEKHA3:NM_001101913:20_cdna Constitutive 0 NULL GeneID:509423 2 GENE PLEKHA3 MGC165825 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 EMBV3_37121 GGAAGAAAGCATCACTTCCCTTCAGGAAAAGCTGTAGGTCAAAATGTCCTGATTCTGGGA Gene BVV0102_411985 - 1 EMBV3_43603 GK000020.2:55353708-55661183 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28549 CACAAACCCCTAGCATGGCCGACACCTGCTGTTCCAGGACTTGTGTTGTTGCTGCATCCA Gene GeneID:783679|KRTAP10-8:NM_001101290:62_cdna Constitutive 0 NULL GeneID:783679 1 GENE KRTAP10-8 NULL keratin associated protein 10-8 EMBV3_10208 GGAATTAATAGAGAAGATGATCGCCATGGACCCCCAGAAGCGCCCGTCAGCGAAGCATGT Gene GeneID:524719|ERN1:XM_002696098:159_cdna Constitutive 0 NULL GeneID:524719 19 GENE ERN1 NULL endoplasmic reticulum to nucleus signaling 1 EMBV3_20583 TTCCCTTCTCAAATCTCAGCCTCATGTTGATCTTTGTTACTGTCAGAACCTGGTGAGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43265 TCTCATTGATCAGACAAAAAGAAACTAGTGCGAGGGGAAGCGCAAACACCGTTTATTTTG Gene GeneID:525888|TOX:NM_001102096:8_cdna Constitutive 0 NULL GeneID:525888 14 GENE TOX MGC152597 thymocyte selection-associated high mobility group box EMBV3_41811 TGACCATGAAATCACAACTTCAGATCACTGTATTGTCACCCCTGTGAGTAAATTACATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40824 CGACAGTGGTTTCAGCAGTGCTTTCCTGGATATGACACCAAAAGCATGGGCACCAAAGCA Gene BVT0102_255405 - 1 EMBV3_40944 GK000005.2:44133098-44195412 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16515 GGGGATTGCTGGGTCATATGGTAGCTCTATGTAATATTTGGAGGTCTTTCCTATCCCTCC Gene BVT0102_149427 + 0 NULL GK000010.2:92632935-92889960 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10122 ATCCCGCCATCGTGCCGCCACCCACCTCAGGTCATCCCAATTCCCGGGCCCGCTTCATAA Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_17693 TTCATCAGCCACGACCGGAGCGGGGAAAGCTACAAGAACCCAGGGAAGCCAGATGGAGTT Gene GeneID:513412|JAM3:NM_001105364:2_cdna UTR3_Alt 2 NULL GeneID:513412 29 GENE JAM3 MGC140154 junctional adhesion molecule 3 EMBV3_20125 GTACTAGAAAATGCAGGCAGTGTTTTCACAAAAGTAAATGTACAGTGATTTGAAATACAA Gene GeneID:533700|DDX5:XM_002696101:171_cdna Constitutive 2 NULL GeneID:533700 19 GENE DDX5 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 EMBV3_23931 CTCTGTCTATATTGTAAAATAGAATTTCAGAGACATTTTTCCTTTTCACACCCTGGGCCC Gene GeneID:532674|GPR116:XM_002697270:26_cdna Constitutive 2 NULL GeneID:532674 23 GENE GPR116 NULL G protein-coupled receptor 116 EMBV3_14745 CGTTGACACTTTGAAATCTTTCGCACTTAAATCTTCAATATATCTTAATTGTGATTCATG Gene GeneID:616786|TMF1:XM_002696959:104_cdna Constitutive 0 NULL GeneID:616786 22 GENE TMF1 NULL TATA element modulatory factor 1 EMBV3_13722 GGAAGCTCTATCTGTCAGAAGGTGGATTCTTACGTTCATTTGCTCTTTGCAGACTGGAGG Gene GeneID:100296273|LOC100296273:XM_002697321:2_cdna Constitutive 0 NULL GeneID:100296273 23 GENE LOC100296273 NULL similar to butyrophilin, subfamily 2, member A2 EMBV3_21605 CTTGAGACTGTCCTGTGCCTGATTGTTTGAGCTGAGTTCAGGGATTTTGCATTGGGCAGG Gene GeneID:540947|SS18:NM_001098122:13_cdna UTR3_Alt 2 NULL GeneID:540947 24 GENE SS18 MGC138909 synovial sarcoma translocation, chromosome 18 EMBV3_22156 AAATGTTCCCGCCGGGACAATTATGGGGAATTGAGGTTCAAGCCTGCCTGTGTCAGCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42066 TAGCGCTCACCTTGGTCACACCTTCCCACAGCTCCACACTCTGAAATACACAACCAGGTA Gene BVT0102_239311 + 1 EMBV3_04726 GK000009.2:32928632-33014531 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236948 TCONS_00236947 TCONS_00236949 1 XLOC_144614 Coding TCONS_00236949 XLOC_144614 Coding Coding SLC35F1 9:33011436-33437306 j TSS177263 4342 1 TCONS_00236949_2 405 8 0.989823161582552 9.41936466741987e-05 0.00038094579256758 0.000196940723857406 0.000501986235596889 0.000223755649542519 0.000372905854649041 0.000206782850610935 5.72440814546831e-09 1.39305227139234e-22 6.99040565979229e-05 8.60252858338526e-14 1.23477259131748e-05 5.01487507183831e-15 1.28013083738533e-11 1.64946000948534e-05 0.000301932532872795 0.000156738248829316 0.000139815390393192 0.000184145775317555 0.000703099545423695 0.000256424794075496 1.91251278590567e-13 4.30488322019895e-14 0.000242575445620195 0.000832908771678534 0.00078643796512629 0.000315590399152267 1.7986215249891e-13 1.71591591979131e-12 2.7692054468496e-05 XM_002690083.3 SLC35F1 PREDICTED: Bos taurus solute carrier family 35, member F1 (SLC35F1), transcript variant X1, mRNA. 0.0 7478 100.00 0.954629203132197 NM_001029858.3 SLC35F1 Homo sapiens solute carrier family 35, member F1 (SLC35F1), mRNA. 0.0 2928 86.49 0.559880239520958 TCONS_00236949_2 sp|Q8BGK5|S35F1_MOUSE S35F1_MOUSE Solute carrier family 35 member F1; 0.0 765 96.91 0.955555555555556 2 coding 0 0 1 1 0.0832826243822858 0.485620700822161 0.00995223132012057 0.848998658373242 ATCGCCGCCGCGCCGCCGCCTCCGCCGCGATGATCCCCCCCGAGCCGCAGCCGCACCAGCCGCCGCCGCCGGCCCCGCCGAACCATGTGGTGACCACCATCGAGAACCTGCCGGCCGAGGGCAGCGGCGGCGGAAGCCTGTCCGCCTCCTCCCGGGCCGGCGTGCGCCAGAGGATCCGCAAAGTGCTGAACAGGGAGATGTTAATCTCTGTGGCTCTAGGCCAGGTGTTATCCCTCCTTATTTGTGGAATTAGCTTGACCAGCAAGTACCTGTCAGAAGATTTCCATGCCAATACGCCAGTCTTCCAGAGTTTCCTCAATTACATTCTTCTCTTCTTGGTCTATACCACCACACTAGCTGTCAGACAAGGAGAAGAAAACCTCCTGGCGATTTTACGGCGAAGATGGTGGAAATACATGATCCTGGGGTTGATAGACTTGGAAGCAAACTATCTGGTGGTCAAGGCTTACCAGTACACGACTCTGACCAGTATCCAGCTCCTGGACTGCTTTGTGATCCCAGTGGTGATCTTGCTCTCCTGGTTCTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCATCGGCATCGTTGTCTGCATCCTGGGGATGGGCTGCATGGCGGGCGCGGACGTGCTCGTGGGCAGGCACCAGGGAGCAGGGGAAAATAAGCTGGTGGGGGATCTCCTGGTCTTAGGAGGAGCCACACTGTATGGTATCTCTAACGTCTGGGAAGAATACATCATCCGAACTCTGAGCCGAGTGGAATTCCTGGGAATGATTGGACTGTTCGGGGCATTTTTCAGTGGAATTCAGTTAGCGATAATGGAGCACAAGGAGCTGTTGAAGGTGCCCTGGGACTGGCAAATAGGACTGCTCTACGTCGGCTTTAGTGCCTGCATGTTTGGTCTCTACAGCTTCATGCCCGTGGTCATAAAGAAAACCAGCGCCACGTCGGTCAACCTCTCGTTGCTCACCGCAGATCTGTACAGCTTGTTCTGCGGGTTGTTTCTCTTCCATTACAAGTTTTCAGGACTGTATCTCCTGTCTTTCTTCACCATCCTCCTCGGGCTGGTGCTCTACTCGTCCACCTCCACGTACATAGCCCAGGACCCCCGGGTTTACAAGCAGTTCCGCAACCCTTCGGGACCCGTCGTGGACTTACCAGCCACAGCTCAGGTGGAGCCTTCGGTCACCTACACCAGCCTGGGCCAGGAGACCGAAGATGAGCCCCACGTGCGTGTGGCCTAGGATGACACCCTCCCTGACCACTGAGGACACCTCCACGGCTGTGTGTCCGCCCGTCATCTCTGTTTTGTACATAGAGAAAGGTATTTATTAGGTGCAGTTTACAGAGGTGGACTGCAAGGTAGCAAATCCGAAAGCCTGTAAGAGGCACACGCTAAACATCCCTGGAGATGCAGGCTCTGATCCACCTGGAGGGATGCCTACCTAGGGTGTATCCTGGTCACACACACACATACACCACCACCCCCCATCCACATTAATTACTGTGAAAATGTTTGAATCAAAAGCAAGTATTACTGTTTGTATGATTATGGTTACTGTTATGATAGCGACTTTCAGGAGGAGGTTTTGTACTCCTGATGGGAACTCTCGCCAGACCCACATGTAGTTAGCATCACTCCCACTTTTCTATGGCAAGTCACTTTTTAAGAATCACACTTTATTTTTGTGCACCTTCTCTGAGTGCTGCATGCCACAGGAGCCCCACCCTGCGACGCTTCCTTATCCTAGGCACCTGGGGGCTCATGGTTCCCTCTGTTACCTGTTGGATCGCCTGCTCAATATGTATTTCGTGCTGTGACCCTTGTGGGGAGTGGCAACTGACCATATAATTCTCTATTCTAGGAATAGATATAAAACAAACATTTTAGCCTTTTTATATTTCAACCTCGGATTACTCCAGGCCATTGCCTTTCTGTTGCAACTCATGATTCTGCTAATCAAGTCCTTGTAATAACAGGATAAGGAATGTTCCATTTCTGTGGCTTATGGGAAACCCCAGAGTAATATCACTTGTGCTTAGGGTACTGTCTTTTTTAAAAAAATCTTTCTGCCCCTTCCTATGTTCCCTCTTCCAAAAAAAAATTTAATTTTCCTTTTCCCCCTAGATTTCTTTAGGGTAGATCAATATGGAGATCAATCAAGGCATTGGAAAAAGCCATGGTCCTCTGCCCTTTTGTGTGACACCCTTTTTGAAATATACCGGCATGGAAATTATCTTGATTGTGGGATATCATTGGTTGTCTGGCCTCCCAACAAAGTCAGGGTGCTGCTGTGGCACAGCCTCTGACAACAGCTCATCTGATATGGCCATTGTGTAGTAGTAAAAATCTCACCAATGAAAAGTCTGGCATTTTTGGTCATATTTGGCATCCATTCGATAACAGAATGTATCAACACAGCATTCTTATGGATACAGAGAATATTCCAGGGTCCTGATAGGGCTTTGAGGGGTATGTCACTAATCTAATTTTGTCGCCTTTACAATAGCTCTTTCTTCAAACGCAGAAAATCAAGAAACACCACAGAGCTCTGTGATTTACAGTAGATTCTCTTTTTCCCTATCAGTACATGCACTAGTCTTTACGTTTGGCTGGCTTCAGTATCATTCAGAAAGATCCTCGACAGAGTTACAGGATTTGTAAAGGAAAAACAAGTGTTTATGAAACTTTGGGCAATTCAAACCAGTTCAAGTTAAGTAAGCAAAGCAAAACTCCAGTGGGGTCTCTGTAAGGTGGAGAACAGATTGCAGCTTAGTCAGGATTCCCATACTGGCCTGAACAAGTCCTAAATAGACCTGCAAAAGTGTCCCATGCTGTCAGTCAGCACCCACGTGGCACCTCTGTCTGCCCTCTACCCTGGGGACAGGGAGTCCTGCCTTGGAGTTGGAGCAGACAAGTTATCTTTCCTGATATGCAAATTGTATGCTCATCTCCATTCAGCCCGCTTAGAAGCCTGTTTTATTTCTAGTGAAAAAAATCAACACTAAAGCTGTATCAAATCAAAAGAACTTTGCCAATGTTTGCTCTCTGCTACCTGTCAAACCAATTAAATACCTTTCTCTGACTATTTTGTCCATTCAGATCTGAAGACCTTTAAAGACTGGTTTTATTTTTGTGTTTATGTTCCTTTGGTTTGCATAATTTGTCTGATTTATTGCATTTTTAGTATTTATTTTCAGCCAAATATTTTCATCTTTTTTTGTTCATTTTTATGACACTAATTTGTAGACGCTTAGTAAAATCTTAAGAAAAATAAGTGGATGAAAGTATTTCCAAGTCAACTCAGTGGATGCAAATTTTTTTTTTTAATTTCTAAAAGGTTTGCAATCAATGGATGGCTACAGGTTGCCATGTGAATCGTTTCCTAGGATATTTTAACTGACTCCAAATTGTATGGAAACCAAGTGTGAATGTTAAGGTGAATTCACTGTATACCTTTTATCATCCCATGTCCTTGTACACAAGACTTTCGTGTCACTGGGGTGCCTCACCGTGTTGGTTCTTCTCCATTTAGAAAGGCTGATAACATATTCGAATTGTCTGAGATTCATCCCATGAATCAGGAGTTCCAGATTGGCCTTTTGGGGAAAAAAAGACAATAGCAAGAAACAAACTCTTTTTCTGTGTTAAGACATCAACCCTTTGGGAATGGGGTAGGAAATGGGAGTAGGACGTCATTAACTCTAACTGTTTGAGTTTCTGGAATTTCATAACCTCAGTAGACACCAGCAAGAATTTCAGCTTTTCAATCTACCATAACTCTCTCTTCCACAAATAAGACTTTAGCAATTTGTATAGAATTTGGCTGGGTAAGCAAACCATAGCTCTCCTAAGTCTCGCTCGAGATAAGTGGTGGTCCTCACTTACTCCATGACAACTTGCACTGGGGCTAGCGCTCACCTTGGTCACACCTTCCCACAGCTCCACACTCTGAAATACACAACCAGGTAGACCAAGCAAAGGAAAAATTGGTACCACTGTGTCCCATGAAAATGTTTCAATGTTTAGTTTAGATATTGCTAACTTGTGCTATTAACCTTTTGACAAGCGTGTAGTATTGTTCGTTTGGGGTTTGTTTTTGATTTGTAACCACTTAGTAGTCCCCAGCTAGCTACCAGTACAGATTTTTACCCCATGGGTAGGATTCTACTGTCAAGCCACATAAATAACAAAGCACACTAATCCCAACACTGCAAATGGAAAATATGAACCAAAAAGGGAAATTGACACCAATAAGTTGAACAAACTCTCCATTTTTGATATTTGCATGCTCCCCTATGGACTGGCTGTGGCAATGTAATGCCTGTATAATGTTTT EMBV3_40142 AGGTGGAAGCCCATGATAGCAGTAGCCATCACCTGAGCCCCAGGTTTAAAAGACACACAT Gene GeneID:281199|GLUL:NM_001040474:8_cdna Constitutive 0 NULL GeneID:281199 16 GENE GLUL MGC128403 glutamate-ammonia ligase (glutamine synthetase) EMBV3_17078 CTCTACATGGGCACTATTGACATTTTGACTCGGATAACTGTTGTGACAGGCTCCCCTCTG Gene BVV0102_058983 + 0 NULL GK000023.2:32786298-32822609 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00137264 1 XLOC_083474 NonCoding TCONS_00137264 XLOC_083474 NonCoding NonCoding - 23:32795642-32795872 - TSS102554 230 1 TCONS_00137264_1 40 0.852173913043478 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000458541841000832 0 0 0 XM_005212958.1 TP53I3 PREDICTED: Bos taurus tumor protein p53 inducible protein 3 (TP53I3), transcript variant X1, mRNA. 1e-11 73.4 69.89 0.721739130434783 NM_001145777.1 FKBP5 Homo sapiens FK506 binding protein 5 (FKBP5), transcript variant 4, 1e-16 89.7 70.65 0.821739130434783 0 noncoding 0 0 0 0 0.201457467123172 0.359642118364742 0.0245686463250233 0.599543072297583 ACAAATCAGGCTTTCTCAACATGGGCACTATTGACATTTTGACTCGGATAACTGTTGTGACAGGCTCCCCTCTGCATTGTTTGCTGTTTAACAGCATCCCTGGCCTCTACCCTCTAGCTGCCAGGAGCACTCCCCAGTTATGATGATCAAAAATGTCAACATTGCCAAATATCCTCTGTGGGACAAAATACCCCCAGTTGAAAGTCTTTGGTGTAAGACAAGATTGGCCT TCONS_00134985 . 5' 9286 TCONS_00134985 . 5' 9286 EMBV3_28215 AGGACTTCTTGCACAGGACTGGCTCCTTTTTTACACGTTGTCTTAAAGGCATCGAAACTG Gene GeneID:613483|LOC613483:XM_002694752:502_cdna Constitutive 0 NULL GeneID:613483 18 GENE LOC613483 NULL similar to MGC17624 protein EMBV3_09643 GTGTGAAGCCTGATTATTTTCCTGTAAAGTTAATGAGAAATAGGATTTTAACTGGAGTAG Gene GeneID:618814|PTPLAD2:NM_001076522:96_cdna Constitutive 2 NULL GeneID:618814 8 GENE PTPLAD2 MGC142592 protein tyrosine phosphatase-like A domain containing 2 EMBV3_09262 GTATATTGTATGTGGTTTTGTGAGATGAGTTGTAGTTAAGAAGCACTCACCAAGTAGCAC Gene GeneID:532626|GPR37:NM_001075969:40_cdna Constitutive 0 NULL GeneID:532626 4 GENE GPR37 MGC139256 G protein-coupled receptor 37 (endothelin receptor type B-like) EMBV3_18562 GAGCAGCTGGCGCTCCCGGTCTTGAGGAATGTAACCAAGGAGAACAGAAACCACCTTTTG Variant GeneID:521103|C28H1orf57:NM_001075816:84_cdna 418^627 5 EMBV3_19369 GeneID:521103 28 GENE C28H1orf57 C1orf57 MGC140669 chromosome 1 open reading frame 57 ortholog EMBV3_13268 CAAGAAGTCCACCACGAATTCTGACCAAAGGCACTCTAGAAGCTCTACATCTCCGAAGAA Variant GeneID:506983|ZC3H8:NM_001075291:35_cdna 150^251 3 EMBV3_04184 GeneID:506983 11 GENE ZC3H8 MGC140316 zinc finger CCCH-type containing 8 EMBV3_11699 GTGGTTGTGGATTTCCATGCACAATGGTGTGGCCCCGAGGTCCCGGGGGGACCCCAGTAG Variant GeneID:281557|TXN2:NM_174208:161_cdna 337^604 5 EMBV3_05963 GeneID:281557 5 GENE TXN2 MGC137598 thioredoxin 2 EMBV3_41496 TAGGAATTCTGAGCAGGAGGGCATTTCATTGCAGGACCTGAAAAGCTAAGTAGCTACCTG Gene GeneID:538928|ZFP62:XM_002689031:90_cdna UTR3_Alt 1 NULL GeneID:538928 7 GENE ZFP62 NULL zinc finger protein 62 homolog (mouse) EMBV3_09043 GCACCAAACCCAGTGGAGTGCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCA Gene BVT0102_163647 + 1 EMBV3_42912 GK000020.2:14746317-14836399 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00063808 TCONS_00063810 TCONS_00162571 TCONS_00200854 TCONS_00186491 TCONS_00218950 TCONS_00162302 TCONS_00217533 TCONS_00189709 TCONS_00131534 TCONS_00063805 TCONS_00240372 TCONS_00210949 TCONS_00255144 TCONS_00063807 TCONS_00098199 TCONS_00240374 TCONS_00147823 TCONS_00116087 TCONS_00131535 TCONS_00033204 TCONS_00149042 TCONS_00222181 TCONS_00111145 TCONS_00222116 TCONS_00131533 TCONS_00106013 TCONS_00063813 TCONS_00186557 TCONS_00233458 TCONS_00054136 TCONS_00129560 TCONS_00186834 TCONS_00012043 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00131531 TCONS_00230828 TCONS_00178734 41 XLOC_090915 XLOC_038534 XLOC_038536 XLOC_099452 XLOC_122505 XLOC_112543 XLOC_132269 XLOC_099184 XLOC_131531 XLOC_115747 XLOC_080239 XLOC_038531 XLOC_147036 XLOC_129459 XLOC_158076 XLOC_038533 XLOC_058445 XLOC_147038 XLOC_089710 XLOC_070256 XLOC_080240 XLOC_019438 XLOC_090919 XLOC_135490 XLOC_067045 XLOC_135425 XLOC_080238 XLOC_062697 XLOC_038539 XLOC_112609 XLOC_142940 XLOC_031945 XLOC_078273 XLOC_112885 XLOC_007593 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_080236 XLOC_140318 XLOC_108507 Coding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_14145 TGCTGGGGCCACCACTCTCAACAACCACATCCGAACCCACACTGGAGAAAAGCCCTTCAA Gene GeneID:519857|PRDM6:NM_001103255:14_cdna UTR3_Alt 2 NULL GeneID:519857 7 GENE PRDM6 MGC148761 PR domain containing 6 EMBV3_22324 AACTTGTGCTGCTGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCC Gene GeneID:534322|WAPAL:XM_002698897:54_cdna Constitutive 0 NULL GeneID:534322 28 GENE WAPAL NULL wings apart-like homolog (Drosophila) EMBV3_36136 TAGTCTGTTGTAGTGGTGAGCTGACACATCCAGGCGTGACGTTGGTGAAATTTTGTGCCC Gene GeneID:508794|DNM1:NM_001076820:52_cdna Constitutive 0 NULL GeneID:508794 11 GENE DNM1 MGC142803 dynamin 1 EMBV3_23625 TATACGGAGCTTCTGTGCTGGCGGAATGGATTCTACCCTTCTCCAGGTGAGGCTCAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23293 TGTGCACGTGAAAGAACTAAGCGTCGTGCTGGGGATCGAGTCTAACGACCTGCCTCTGCT Gene GeneID:100138353|FNIP2:XM_002694423:47_cdna Constitutive 0 NULL GeneID:100138353 17 GENE FNIP2 NULL folliculin interacting protein 2 EMBV3_14782 ACCTCTGGCATGGCTGTCTGGATCTACACGGTAACAGGAGGAAGAACTTGGTGCTGGATT Gene BVT0102_189114 + 0 NULL GK000021.2:70359249-70707424 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35614 ATCAAGGATGAGCTGTTCGGGACTGTGAAGGTGAAGACAGAGATCAGCGTGGAGAGCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31766 CAGAGATGAACCGCCGCTCCAACGAGTGGAAGACAGTGATGGGCTGTGTCTTTTTCTTCT Gene GeneID:618339|LOC618339:XM_002692431:422_cdna Constitutive 0 NULL GeneID:618339 13 GENE LOC618339 NULL similar to cytochrome c oxidase subunit IV EMBV3_18855 GTGTCCTGGGAACACAGAAGAGGGGGAACCAACTCTCCATCTGGCAACACAGGGGCTTCA Gene BVV0102_445813 + 0 NULL GK000029.2:48070045-48075286 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165661 1 XLOC_100588 Coding TCONS_00165661 XLOC_100588 NonCoding Coding LOC100297748 29:48073263-48076930 = TSS123703 3375 1 TCONS_00165661_1 328 0.121481481481481 3 0.0801963993453355 0.000964254695239438 0.00111022159614155 0.000500050907120392 0.00055551629378269 0.000313634685061829 8.23331555169751e-05 0.000235098948518239 0.00111564321692961 0.000359701095146602 4.16996726139882e-05 0.000106708823449079 0.000145146397079811 0.000147191523980736 0.000216778541134981 0.000612919296865649 1.26262513040251e-05 0 7.43432537888166e-06 0.000605761734357936 0.000276433714803898 5.86349053815335e-05 0 1.34816215843333e-137 0.000163920929491874 0.000907920122159634 0.000284799816329436 0.00048375084735172 5.94527151818982e-05 9.37267991337907e-06 4.85347553234807e-173 NM_003626.3 liprin Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 4e-56 224 83.94 0.0607407407407407 0 noncoding 0 0 0 0 -0.00905517419799182 0.950817847016996 0.0145131587229182 0.783838745277356 ATGACGGGGCGAGGGGCGGTGCTCCGGGCTCGGCGGACCCCCGGGACGGAGGTGCCCAGGGCCGCGCACCGCGCACCCGACGAGAACGACGCTTCTAGCCGGCTCGCACCCGCGCCCCGGGAGGTGTTGGCGGGGGGGCCGCTCGGCCCCGCGAGTCCGTCCGCCGGGGGTCCCCCCGGGCCGCGCCCCCCGCTCCCGGGGGCGCTGACACTAAGCAGCCGTGCGCCGCCCGGGGCCCCGCTCCGCCCCGACCCTGCCTCGGTGCCCCGCTGCCTTACCTTGCTCGCCGGCGGGAGCGGGCGAGGACGCTCCGCGGGCGGCTGCTCGCTCCAGGCGAGCTCCGGGCCCGACGAAGGCAGCCCGCCGCCCGCCGCCCGCCCCGCGCCCCGCGGCCCCGCGTCCCCGGGCCCGCCGCCCCCAGTCACTGAGGCCGGCCCGCGGCCGGACACTGGCGGAGCGCAGGAGGAGCGGGCCCGGCGGCGCGTCGCCGGCGTCAACGTGCCCGACGTCGGGCGCGTCGTCGCAGCGTCAGCGCCGAGCGCCGCCGGCACGCCCCGCCCCGTCCCCCAGCCCTGGAGAGGCGCGCGGGGGCGCCGAGTGCGCAAGTGCCATCGCCTCCTCAGTGGGTGCGCCGCTGCGGAGCCGAGACTCTGGGCTCCCGGGTCCCGGGTCTGTGCAGCGTCCCGGGCAGCATCTTCCGCCTGGGGCTGTCTCCAGATCTCCGCTGACAGTCGCGGGGTTTCACCAAAGGTCGACATCGAGCGTCCACTGGCGTCAGGTTCTGAGCCGGACAGTTCCCGAAGGTCACCGCTGCATACACACCTGACGGTAGAGCGCGCCCCGCTGCGCGTCACCTGCTCGCAGCCTGCGGACAGGCCTCCGGAGCCTCCCAGGAACCCATCCTTAAACACGACTCGGAAGGACGCGGTCTCAACGCAAGACCGAGCTTCACCTGCAGCACCCGGGGAGACAGAGGTGGCAGTGTGATGTGGACGCTCCTGGGCGCTACGCCGAGAAGGCAAACTTTGGAGCCAGACGCTGCAGCTTCAACTTCCAGCAGACGCTTCTCCCCGCAGTGTGGGCCTGAGCAACGGGGGAGCCCACCTGCAAGATGGGGGAATGAATGATACAGACCCATCCCAGGGCTGTTCTAAGAAACGGAATTTGTAGGGAGCCACCTAGTCAGGACCCTGACTCGGGAAGTACTCAGCGAATGACGGGCATTTTTATCTTTCTCAAACATTGTTATCCTTTTCATATCCATATGTCATCCTTGCTCAAACGTTTAAAAATGCCTTCTATCCACCAAGTCCTGTGCTAGACCTTGCAGATACAGATATTAATAAGTGTACTTTAAAAAAATTAAAGCAGGTGCTCGCCACTCAAGGTCTGTCTCCTGGATCACAAGCTGAAGTGTCTGGGCATTGTTGCCAAGTGATGCTGACCACTGTTTGGCTAAGTCTAAGCCACCAGGGTACCCAGTTAAGAAAAGGCTGCATGGGGGGAAGGGCGCGGGAGAGGGGAAGTGTGAAGTCTTCCAGGTGGGTTCCTTGAGTCCCGGTTGTGAGCTTATCAAGAACAGGTGCTAAGAGGCCCAGGACCACAGCTTTCATCCATGTATTTGTTCATTCAATAAATATTTGAATGACTCCATATAAATGTGAATTTGCACCCCTGATCCTGGGTCTGGAACAGAGGTAAAGATCCAGCTCTCCCCAAGTTATCAGCTTAATTCATATTGCAGCTATGCTCAGAAGGTACCTGCATCCTAAGAAATCAGCACAATACTGAAATTGTCCACAGGGTGAAATGTTCACTCATTTCATGAACATTTACAGAGCACTTGAACCAGGCATGGCCTAGATGTGGGGAACAGGAGACTGACAAAGACTTCAACTTTCGCCCAGCTCACAGCCTGGAGCGGGGGCGAGAAACCGGCCATCACAATGCCGGTCCTGTAGAGTGCGTGACTGGGTGTCCTGGGAACACAGAAGAGGGGGAACCAACTCTCCATCTGGCATCACAGGGGCTTCACGGAGGGAACATCTGGGCTGGGTCTCAGGACGTGCAGTTTTCCAAGCAGAGAAGGGAGAAGCCCAGCCCATTTGGTAGAGCAGCAGGAAAATGAGAATCCCAGATTTCACTTGCTTTCATTCATTCATTTCATTCCCTCAGATTGCCAAATCAGTAAGACGAAAATTGTAAACAACCTCCAATGACCAGCAAATGACAGGCAAAATTCCTTGTCTTGATTGTAATGGTAATTACATGACTACATGTGCTGATCAAATCTCGTACAACTGTACATTTTCTAGATATTTTATTTTCACTTTATTATTTATTTATTTGGCTGCATCTGGTCTTAGTGGTCCACCAGGGAAGTCCCCAGAACTGTACATTAATATGTTATTTATGCCCTAATTTTGTAAATGGTAAAAAGCTTTTAAAAAAAATAACAAGTTACACATGAGAATATACAGTGTGAGCCCGTATTAAAAAAAAAAAAAACAGTTTGTATTTAGATAAAGTATGTATTATGTAAAATTTGTTGTCTCTGGAAAATTCTAAATATTATTAATCAAACTGATAAAATTTTAGTAAAATGAGTTTTACATGAGATGAAATATTTTGGAAAACTAAAATTCAATTTTAATCTGGAGTTTATAAAAGGAAACATATGTCCATATATGAAAACACTTTTGCTGTATCCAGTTCTTTTATGTTTCTCTATATGTGCCCGTACATAGATACTCCTGGAAAGAGTTAACATCAGCCTGTTGGCAGTGCTTGTCTTTGAGGGGAACTGTGGGTAGTTTTCACTTTCTTCTTTGTGCTATCCAGATACTTTATCATGAATGTACATCCTTTTTTATCATTTGTGGAAAACCCCCCACCAATGTTACTTTAATAAAACCTAGGCAAGAACAAACCATGGAAAATTGCTTTCAGGAAGCTCAGATGACATTTCAATGTAGTAATTTATATCACTCAACTAAACTCTTTCCCAGAAGTATCTACCTGAAAAATATTTCAGAGGCTCAATCAGGAAAACAAAGAACACGGAAAATGTTTTCTCTCCAATTCTTCTATTAAAAGTCAATAAAATATTGGGGGTACGGGTGTGGAGACTTTTTTTTTTTTTTACTGTGGCCAGAGGTGTGTTTTCACAAATGTGCCTGCCAGCTTGACTCTCCAGATGATGTAGATGTCTGCTTTGAGCGTGGCCTGGGCCACCTCCCCTGTCTAGAAATGTAAGGGGCTCAGGAGGAGGGTTCCTGTGAGATGAGTGTGTGGCCTGGCCTCAGTCACAGAGATCTGAGTGCATCCCAAGTCTATTAGAATATGCAAAGCAACCTAATGAATCATGTGTGTGTG EMBV3_29871 GTGATGGTGTGCTTGCTTCTCTTTCAGTCAGGCTTTTGGGTTCAGGTATGACAGGCTCTG Gene BVT0102_290983 + 0 NULL GK000015.2:34220706-34226340 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058906 TCONS_00058907 TCONS_00061043 TCONS_00061044 2 XLOC_036222 XLOC_036907 Coding TCONS_00061043 XLOC_036907 Coding Coding CLMP 15:34223929-34332243 = TSS45539 4530 1 TCONS_00061043_3 373 0.0686534216335541 7 0.958241392999917 3.9727050805179e-25 8.27972433514658e-24 0 5.24312410496966e-22 0 0 2.38536077586083e-24 9.31314452736889e-12 1.02439255152161e-11 2.43816003900287e-07 1.49495873579481e-07 0 2.15719848645956e-12 0 2.86390153093602e-07 0.00181326290293679 3.30925550533756e-05 0.0021542383389823 0 4.33184628426211e-07 0 1.4626106089498e-05 0.00017482501841675 0.000898526465845177 5.3872702482938e-12 1.10999874626912e-20 4.48182708470519e-12 8.24364205114864e-07 5.35342172564336e-12 2.0076472541817e-12 XM_005215951.1 CLMP PREDICTED: Bos taurus CXADR-like membrane protein (CLMP), 0.0 8170 100.00 0.999779249448124 NM_024769.2 CLMP Homo sapiens CXADR-like membrane protein (CLMP), mRNA. 0.0 2342 80.87 0.542384105960265 TCONS_00061043_3 sp|Q9H6B4|CLMP_HUMAN CLMP_HUMAN CXADR-like membrane protein; 0.0 609 90.66 0.973190348525469 5 coding 0 0 0 0 -0.0572832130010321 0.638637087376445 0.0338763410757571 0.525350774341975 GTTCCACGAAGCGGTAGCGTTTTTCCGTCTCGTCTTTTCCTCGCTGACCCGGGTCCCCGCTCCCGTCCGGGTGCAAGCTGGTGGGGCGAGCACTGGAAGCCCCTCTGAGCGGGGCGCGGGGACCCCGGAGCCGGGCGCGGGGCGTGGGGCCGTTCCCGCGCCGGCACATGGCTGCAGCCGCCCCGCGCGCACCCCGAGTCGCCGCGCCCAGCTCGCCAGAGGTCCGTCGGCTGCGCTCTGCTGCGCCCCGCCGCCACCGGAGCCAGGCAGCGGCTGAGCGGGGAGGAGCCCGCGCCCGGGCGTCGGGATGACCCTCCTCGTTCTGCTGGGGCTAGTCTCCTACTACGTTGGAACCTTGGGGACTCACACTGAGATCAAGAAAGTGGCAGAGGAGAAGGTCACTCTGCCCTGTCACCATCAACTGGGGCTCCCAGAAAAAGACACCCTGGATATCGAATGGCTGCTCACCGATCGTGAAGGGAACCAAAAAGTGGTGATCACTTACTCCAGCCATCACGTCTACAATAACTTGACTGAGGAACAGAAGGGCCGAGTGGCCTTCGCTTCCAATTTCCTGGCAGGAGATGCCTCCCTGCAGATTGAGCCTCTGAAGCCCAGTGATGAGGGCCGGTACACCTGCAAGGTGAAGAACTCAGGCCGCTATGTGTGGAGCTACGTCATCTTAAAAGTTTTAGTGAGACCATCAAAGCCCAAGTGTGAATTGGAAGGAGAGCTGACAGAAGGAAGCGACCTGACTTTGCAGTGTGAGTCATCCTCTGGCACAGAGCCCATTGTGTATTCCTGGCAGCGAGTCCAGGAGAAGGAGGGAGAGGATGAACGTCTGCCTCCCAAATCTAAGATTGACTACAACCACCCTGGACGTGTCCTGCTGCAGAATCTCACCATGTCCTCCTCTGGGCTCTACCAGTGCACAGCAGGCAATGAGGCTGGGAAGGAGAGCTGTGTGGTGCGAGTGACCGTACAGTATGTACAGAGTGTGGGCATGATTGCAGGAGCAGTGACAGGTATGGTGGCCGGAGCCCTGCTGATTTTCCTCTTGGTGTGGCTGTTGATCCGAAGGAAAGACAAAAAGAGATATGAGGAAGAAGAGAGACCAAATGAAATTCGAGAAGATGCGGAAGCCCCGAAGGCCCGCCTGGTGAAGCCCAGCTCCTCTTCCTCGGGCTCGCGAAGCTCTCGCTCCGGCTCCTCCTCCACGCGCTCCACCGCCAACAGCGGCTCCCGCAGCCAGCGGACCCCATGCGCAGAGGCGGCGCGGCGGCAGGGGCAGGCCGCCCACACCTACGGCCCGGTGGGGCCCGAGGCCAGAAGTTCTGAACCAAAGAAAGCCCCCCATGCTACCCTGACCAAAGCAGAAAACACCCCCAGCACGATCCCCAGCCAGAGCAGAGCCTTCCAAACTGTTTGAGTTAGAGTGGACTTGACTCGCCAGCTTTTCCCAGGCGTCAGGGCTCTTCTGGTCATCAACTCTCAATCACCAGCCACACGACCCTCCTCGAGCCCAACAAGGGGTCATTTAAGTAGCAGCAACCACTGCACGGAATAGATTCAAATGAACACTTTTCTTACATGACACCAAACGAGGAAAAGGATGTAAGCTGATCATCTCCAAAAAGGCACCTCACTGTGCCTTTAGACCAGAGTGGGTGGGAAATGGGGGCCCAAATCTGGGTGTTTGGGGACCGGGAACCATGGTGAAAGAGTTGGGGAAAGGGGAAATGAATACACTTAGAACTTCTCACTTGCAGTTTTGTATCACGTTGACTCACCATTGTCAAGAAACGAGGTGTTGTTCATAAATTTTCTATGCATTTCTGCAAACCTACTGGATTATTATGACTATTCAGAGTCAAGCAGAACCTACAGCCTTATATTACACCTATTTGCACCATGAGAAACTCCAAAAAAGGAAACACATCTCTTCTATCCTGACTTGACTTCATTTACCACAAAATTTGGGTATTTCAAGAGGAGTTGAAATAGTGGGAGATGGAGAATGATTGAACTTTTCCACGACTTATTGGTTGAATACCAATAATCCACTATCAATCTTCCTACTTATATTGAACCATAAAAGAAATAAAAAAGGAGTTCAAAATGTGTAATGAGGGACTGTGAATAACTTTCCATTTTGATATTCAGAGGGCCACTGACAAATATCAGAAATATATGCTGGAATAATTGTGGATTTTCCCTCAAAGTGGATGTCTCTAAGGATTTTCTGCTGGGTATCTGTGGAGCAAGAAAATAGGTGTTTTAACATTTAACAGTCTCCTTAGATGGAAATCTTTGAGAGAAAAGGTCTTTTCAGGATGCTGGAAGATCATCCAACAAACCATTACAGTCTCTTCTTTCTGTGAACATATGAAGTCAGAATTTCAAGACTGACTAGACCAGAAAGGGAGATTACATCGGTTTTCTCTTAGTATGTCAAGGAGTGATATCAGAAGTTCAGTATTGCACCAAACTTAGGAGTTTCCTCCACTTCTTTCCTTTCAGGAGGATGTGAACGTGGGACTTGTATTGATTCTAGGCCTTAAATAATCAAACAGATCAGGGATTGCCAACATTTTCTGGTGGCACTGCATGGACATCATAACATTCCCTCTTGAGAGGCTGAGACAGACAGAAATTCAGTACTTTCTCAGTTTAGCCTGTAAGGAAGCCTAGCTCTAGGCTGGAAGGAAAGGAAATGAACATTTAGGCAAGAGATGGTGAGGATAACTAGTGGGTGGCGGGGGGATCTGGGTTAGTGCCTGTTAAATATTGTCAGCATTTTGGAAAGATTTGCGGAAATGATTCACCAGGATAGCTCTCACAAGAGCTGACTCATGGGAGAAGAAAGGTGGGGTCTGCGAAATAAAAAGAAAGCAGCCTCCCATACAATAACTTGCTTTTTTAATAGTTTTGACTACTCTGCTAGTCAAATTCATCCTACAATTCATTGTTTAGCAAGAATGCCAAACCTGAAATAGCCCTTCAAACTCTAAAGCAAATGTCAACAGGTCACCATTGGTAGAACAAAATGTTTATTATTATTAAAAGGCCAAGAAGTCCCTGGCAGGGCAGTGGTTAGGACTCTGCTTTCACTGCTAAGGGTGCAGTTTCAGTCACTGGTCAGGGAACTACAGTCCTGATAGGTGAGTGGGGCAGCCAAAAGTAATTAATTAAACATTGTTAAAAAGGCAGCAGGCTATGAGAAAGGAAAAGTAGTGCTAAATGTGGTGATGAAATCCCTGTTTGTTTTGGGAATCTAAGTTCCCCAACCAGGGATCAAATCTGTACCCCCTGCACTATGAGCAAGGAGTCTTAACCACTGGACCACCAGGAAAGTCCCGACAAAAGCCCTGTTTCTAAAATGGGAATCAGGTGCTTAAAGGGGAAAAGTTGACCTAGGATTTTGTCCCGTTTTTGTTTTCATTTTTACCTCTAATTATCACATACTATAAATGCATTTCTAAAGTCCTTTAAGAAGCAGGTTTTACCCTTGACTAAAAGTTTCATTTTGAGTTTTGTCTTCCTCTAAAAAAAAAGTTGGGGGCAATTCCCTGCAGTCTAGTGGTTAGGGCTCTATGCTTTCACTGCCAAGGGTGCTGATTCAATCCCTGGTCAGGGAACTAAGAGCCCACAAGCAGCACAGCTCCGCCAAAAAAAAGTTGGGAAATGAAACACTGAGGAAGCAAAGAATGTCTGCCATTAGTTTAAGAGGGTTAGCATATTTGGAATGCTTCTTATACTAACACTGCCTCCTTGTAAGATATAAATTTCTTATTTACTTCACCAACTTATTCTTCTAGTTGTGTGGTGTCTAGGCAACATATCAATTCTGCTGTGTAATTCAGAGAATTCTCATTCCAAGAGTATCTGAGCCAAACTGAGTATTCTGTGGCAGCTGCGGCAGTGCCATCACTAGCAATTTGCTCTTATCATTATTTATTACCTTTGAACCTAAGGTTTCCTGCCTATGCCTCCACAGGCAGGAGTCAGTCCCCTTTGCATGAAAAGGTTTAAACAGGTTAGTTATTAGAAGACTAAAATACTAGTTGAATATTCGTATTTTGGAAATCTGTTCACACTGGAGATCTACAGAAATGCCACAAATTATTACCTGAAATCAGAAATTCTAGAAATTGAAGATTCTGAGATGAGATACTGAAGTCTTAATAGTGATGGTGTGCTTGCTTCTCTTTCAGTCAGGCTTTTGGGTTCAGATATGACAGGCTCTGGGGTTAAAATAAAGTTTGAACCATTACTTGTGTCAAACCATATTCCATTAACCTTGCAAGTCAAATACATTTGATTCTTTAATAAAAAACAAAAAAGGATAAAATAGATGGTAGAAGAAAAGGTATTTGTAGAAAGAAGATACAGATGGAATGATCTGGATGTTTAGAGAATAGCCATTTCAATAAAATATATATACACTAAACTTAAAATTGTAAAATAATGAAGTGATGCCTTTCTTGTTACACTGTATAAAAAGAATTTCAAAACTGCCATTGCAACAAG EMBV3_02243 GAGCTTTCCATAATCTGAAACAAACAGCAAAATGAGGTAACCAAATGTACCAACAGGGGG Gene BVT0101_054064 - 1 EMBV3_10059 GK000011.2:26390226-26402655 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227835 TCONS_00227841 TCONS_00227846 TCONS_00227849 TCONS_00227838 TCONS_00227845 TCONS_00227843 TCONS_00227848 TCONS_00227847 TCONS_00227844 TCONS_00227833 TCONS_00227834 TCONS_00227842 TCONS_00227850 TCONS_00227837 TCONS_00227840 TCONS_00227836 TCONS_00227839 1 XLOC_138349 Coding TCONS_00227845 XLOC_138349 Coding Coding RNF38 8:60965521-61057110 j TSS170012 7127 1 TCONS_00227845_5 432 0.0126280342360039 13 0.922326068917325 0.00343001496589791 0.00401859189861296 0.00304794476439994 0.00181185827167191 0.00135137817838587 0.000930167588852676 0.000515853710669697 0.000905075341918638 0.00200989849816251 0.000261316704505152 1.59274232991308e-05 0.000168369507507068 0.00056712911595764 1.38526898948153e-07 0.000530859019210248 0.000299697004125926 0.000343732655615879 4.40456812315363e-13 1.08858884087272e-07 0.00198358471673463 0.000202093627885867 0.00143041278443652 1.8533033019165e-09 0.00125345515403917 0.000705414850742277 0.00115998035401602 0.00173582364650005 0.000399291625813643 1.66025426598786e-16 1.86025684312962e-14 XM_005210094.1 RNF38 PREDICTED: Bos taurus ring finger protein 38 (RNF38), transcript 0.0 8980 100.00 0.698470604742528 XM_005251364.1 RNF38 PREDICTED: Homo sapiens ring finger protein 38 (RNF38), transcript 0.0 6648 89.37 0.698330293251017 TCONS_00227845_5 sp|Q9H0F5|RNF38_HUMAN RNF38_HUMAN RING finger protein 38; 0.0 862 98.61 0.997685185185185 6 coding 1 1 1 1 0.121263841249514 0.520917491817249 -0.0808026785745538 0.16466602691196 GCCCCATGGTAGTGTTGGTGCTTCTTTTCAGTGCCAGTCCATCCATCACGACCACATTTGTCATGATGACAGTGACAAGATATCTCCCGGGGCCAATTCAGCACCTCTACCTGGCCATCCTAACAAGGTGATTTGTGAAAGGGTGAGACTTCAGAGCCTGTTCCCTCTCCTCCCAAGTGATCAGAACACTACCGTTCAAGAGGATGCTCACTTCAAAGCTTTCTTCCAGAGTGAAGATAGTCCAAGTCCCAAGAGACAGCGCCTCTCTCATTCAGTCTTCGATTATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAGCCAACATCACTTCTCAGGGGAACGATGCAACACACCTGCACGCAACAGAAGAAGTCCTCCTGTCAGGCGTCAGAGAGGAAGAAGGGATCGTCAGTCTCGACTTAATTCCATTAGTCAAGATGAAAATTATCACCATCTCCCTTATGCACAGCAGCAAGCAATAGAAGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACACCCTGCTGCTCATCCACCCCAGCAGAATGCAGTAATGGTTGACATACATGATCAGCTCCATCAGGGCACCGTCCCTGTTTCTTACACAGTAACAACAGTGGCACCACATGGGATTCCCCTCTGCACAGGCCAGCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGCTCTGTGGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAAGCATGTTCTGTTCAGCACTTACCAGTACCGTATGCTGCATTTCCACCCCTTATTTCCAGTGATCCGTTTATTTTACATCCTCCCCATCTTTCTCCCCATCATCCTCCTCATTTGCCACCTCCAAGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAAAGGATAGAAAACGAAGTGGAACTCTTAGGAGAACATCTTCCTGTGGGAGGTTTTACTTACCCTCCATCTGCCCATCCCCCGACATTACCTCCATCAGCTCCTTTGCAGTTCCTAACACATGATCCTTTGCATCAGGAGGTTTCGTATGGAGTACCTTATCCTCCATTTATGCCTCGGAGGCTCACAGGACGCAGTAGATACCGATCCCAGCAGCCCATACCACCACCCCCTTACCATCCCAGCTTACTACCATATGTGTTATCAATGCTTCCAGTGCCACCTGCAGTGGGCCCAACTTTCAGCTTTGAATTGGATGTGGAAGATGGAGAAGTAGAAAATTACGAGGCCCTGTTAAACCTAGCAGAGCGACTGGGAGAGGCCAAGCCTCGAGGACTGACTAAAGCAGATATTGAACAACTTCCTTCTTACCGGTTCAATCCTAACAACCACCAGTCAGAACAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTACTTAGAGTTTTACCCTGTAACCATGAGTTCCATGCCAAGTGTGTCGACAAATGGCTTAAGGCAAATCGTACTTGCCCAATCTGCCGAGCTGATGCTTCAGAAGTGCATCGGGATTCAGAATGACCAACCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATACGGACTATCCATTGAACTTAATCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTTATACTAACCGTGTGATTGGAACTCCAAAGACTTTTTCTTTAGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTTCATTAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTGAGTGGCAATGAGTGCAGCGTATGACTGTTGATGGTAAATGTATCTGTGTGTGTGAGAGAGAGAATGTGTGAAACTACTTGTGTGAGGGCATGGTAGCTAACGTGTGTATGAGATCCTATATACCAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTATTTAAACAGCACTAGTACTGTACACTGGTTTCCCCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCAACGATAAGCATTGAATACTCCATCCCCTTCCCTCCCAGTGAATGGAATGAGAAAAGCCTTCTTCCTTTGCTTCAGGCAGCTGTCACCTTCTCTTCGTTGGTGGTCCCAACTGGGTCACTTAAGGAAAAAGTGTAATAGATTCTCACTCCATGAACCTGAAATTTTGATTTTTGTCGTGAAAAAGAAATTTTTAAATCTCCAACTTGCTGTTTCCAAAAAGAAGGTGCAATATCATACATCATCAGTTAGCAATATTAGCATTTCAATCAGTGATTTGAATGTTGATACTCTCTTGGTTTTCCTTTACATTTTCAGTAAGCTTCTTAGCCAGACGTGCTTGTGATTTTTTTTTTTCTTTTAATGTTTAGGTTTGTAGTCTATTCTGAAGATATTTGAGTAATATATTTCTAAGAATACCACTGGTCCCATGAAGTCTCACCTCTTCTAATTCCACCAGAAAAAAATCTGTTAACTCAGCTTGACTTCTGATATGTTATTTGTTCAAGCTCCCACAGGCAACAAAATTGTTTTAAGAAGACTATGTTTCTGTTCTGCCAAGCTCCAATTTTGAAAGTTGTCTAGTTCTTCTCCCCTCAGTAAACGTGCTTCTCATTGAAATCCTCATTTCCAGGGTGGATCAAGTGCTGTGACAGCTCGAGTTCCTTAGACCTGGTGTGCTTTGATGTTTTATCACTTTTCTTTTTTGTTGAATGAGAAAAAAATTAACAGGTGTCCAGAATACTTGCAGTATAAATGAAGATTTGATTTTTGTATAAAAAATAATGCTGTAAAACAGGAATTGACCTGCATTTAGTTGCTCTGAAAAGAATACATAGCTGTGTGGATTTCTTTGTTTTTTTAATAGGTTCCTTGAGCATAATTCAGATCGTTTCAAGTCATTTTTCTAGCAGTGTTTGAATTCCCCTCTCATTCTTCTAGTGTCTTCACCATTGTCTGCCTCTTCGTGCAGTTGCTGTCCTTCTTCTGGTTGCAGTGGCACAAGCTGCAGTTCTCCAGTCAGGACTGTGATGACTTGCTGCCAACCTCAGCTTTCGTTTGGCTGTGTCCGTTTTCTACTCAGTGTTAACTACTTGTTACTGCCATGCTACTTGCCTTCCCTTGAAGACTATAAGCTTATCACAGCTTAGAGTTCAGTAAAGTCAATTCACACAGAAGCACAATTTTGCCCTTTTCCAGACACTGTTGCCTCTATCTAGTCCTACAAGTAGGATTTTGCATACTTTGTTTGCCCCTGTATTTGTCAGTGCATCAGAAATACATCTAAACAGTGGTGAAATGCACATGTTACTTTTAAATCATTAGAGTATTCCCTACCTGTTCCTAATGAATAAAGTGTGTTAAAGACCAAAATTACTGGTGTAATAATCAACTACATTACAAATCACGTATAGTTTAATCTTTATTTTTTTTAATTAAAAAAATCATGTTTAAAATGGCAAAAGCCCATCTTATACATAGACTCTTTTATATAGCTGCAAAAAATTTATATCTGTACAGATCTAACATAACATTACTACACTCAGTATTCATTTTATTGAAGCATGCAAGTAAAGCACTTTTTCTAATTTATATAGATACTTAATTAACAAGGCACACTGTACTAATGACTAGGAAAAGTAGCTCTTTCTTCCCTCTCTGGGATGATGAATTCTTGTCATACTACCCCTTTTCCATTAAATTTTTGAGAGGCCGTTGGCAATTTAGGAGGCAGCAGGGTCTATTTTGGTAAAATCCAGAATTGTTGCACTCTTGTGGCTGATCTCTCTTTGGGAATGTCTTTTCTTCGCATGGGGCTCTTAGAGATGTGTGCAGATTTGCTTATTAAGTAGTTAGTGTGTGTTAGGAGCGTACATGCATGTGTTCCAAACCAGCTCAACCTAGCCACATTTAGCAACCGTGTGGCTAGCAGAAGAGAAAGAACAGTTGATTTGTACCCAGCTGTTGACTCCTTAGGTGATGCACCAGATAGCAGGCAGATGTTGGTTTCTTGCCTTCTTCCCCTTTCCTCCTAAAACAATATTGGCTTTACCACCTTAACTCGGCTGTGTTTTTTTGTTTTCCTTTGCATGAAATACCACCTTTGTTGGTTTTTAGCACCCCCTCTTCCCCAAAAAGAAAAACAAAAACAAAAAACAAGGCCTCCAGGTATCAAGATCTCATTAGGATTTTCTGTCCTGAATTTTTTCAAGCAAAATCTAGAAAATGTGAAAGCCTATTTAGATTTTATACACTCTCTGAAATGTGATTTGTTAAGATTCTTATATTTGGGCCTCTTATAATATTTTAAATGAGATCTACCAACTCACTTACGAGAATATTTTTCACAGATATCTTTAGGCCTTTATTAGAAAGCTATTTTCCCCCTGTTGGTACATTTGGTTACCTCATTTTGCTGTTTGTTTCAGATTATGGAAAGCTCACAGGGGTGTATTTTGGAATCATTTGCTGAGTCATTTCCTCAAATCATACTCCATTGTATCAGTTAACATATAGTTTTAAATGTACGTATTATAAATATCTGTAACCAAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACATTGGGTTGTGTTTGGTGTTACTGTGTTAGGTAGGGAAGGGTAGGGGTCATGTGTGTTTGGAGGGAGGGATGTAGGGGACTTCCAGCAGGAAAATAGAGCTCTTGAGCTCCGAGCAGCCAAACTTAACTTTGAGGAAGTAATTCAGATTTTGTTTCTGTGTTTGTGTAAACGACTTAGAAACATAAAACCAACTTGCTTTATAACTCGTGTGGCAGATACTTATATCTTCAAAAAGGCCAAGAAGATAGCTCGAGTGTAGGCACATGTACATGGTATGAGCTCATTGAACAGTAAAGTTACATTAAGTGGGTGCCTGGAGTTCTTTCTATTTGTGTCAACCATAAGATACAAAAGATAGTTGGGCAGATTGGTTCACGTTAGATATAGTATGTTATGTCTAACTTGTCCACATAATACGGAAAGAGGAGCTCATTTTCCATACATGTTTGTTGAATTGCTTTCTTTTGACTAAAAAAGGAAGAGAGTAAAGCCATCTACTTATATATTATTACATGCTGAAAGTGGAAATAGGATGAAAAAAATGAGGCTAAGTAATAGAACCGAATTCTCCCTCTTTCAGGAAGCAGTCCTTTGGCTCCAGTACTTCTTGACAGAAGCATTCAGAAAAGTGACCAATCAGGGTCACTGATTGTGTCCCTCAGTTTTCCAACATACTTGAAAGAATGTTTGCATTTGAACTGTGAATGTCTCAAAACTTGTTGTCTTATATTACCGAGGCATTTGCTGCTCAGTCAGTACCTGTGCATTCTCTCCCACCTCCCTACTTACTACTGTAGGCAGCGAGTCCCATGCGGCTGGTTCTGACCAAGGGACCATAAGGGTAGGCCATGCAGCGCTCTCTTCTGCCGTGGTGATGGCAGGCCTGGATCCTGAGTCACTGCCTGAAGAGCCACTGGATTCCACGGATTTTGTGTTAACAGTAAACTGAGGTCCTTAGACTACTCTTTGTCAGGACTTTGTCTTTGCCCATTTATTCCCCCCTTTCAAAAGACTTAAGTCTGTTTAGTCTTATTCTTACAACACTTTGCTAATACTAATCCTCAAGTGTACCAGTTAAACACGACTGACTACAGTTAACTTGCAAGGTCAGATTTGCACCACATGATAAAATTGTTCAGGTCATTACCAAGTATCTCAGGTCTCTGTGTGCTTCAGGCTAATGATAATGAAACATTACCTTTGATATCCCTAGACTTCTCAATGTTTTCATTGCATGCCTTAATATACTACAGTATGATTAGAAATATTTTACTGTTTGTATAGTTGAATGTAATTTATTTCTATATCAATACATAAATATGTAAAAAGCAGACTTAGTTTCTGTGAACATCATATATAGCTTCCCTGGCTAACATTTAAGAACAGAATTTCCTGTTTGTCAGTTTAATTCCCAAATTAAACATTTGTTTATAGCACCTTCCAGATTTGTACCTATTTAAAAGATTAACTTTCCAGTCAGAGAATTGGGCATTCTAAAAGAGCAACAAACTTTGAACCCATACAGAGTGTGTGGGGTAGACTCCTACAAAGATTGCTCTAAAGTGCACATGCTCTTAACCTTTTTCATGTGGTTCTTCTGCCTCCCAAACTGGCAGGAACTATAGGAATGAGAAAGATTGAAGGGGAAAAAAAGAACATAGTGACAGCCAGGGATACTGAATGTCACCTTGCAGTTTGGAAATGGGCTGTAGGGTCAGTATAGATGTTTCCTCGCTACAAAGATGAGGAGAATTAACTCGGGATGAAGGAACCCACGTTCCCTTCAAACCTCTATTTCTTGGTCTACACGTGGAAACAAAGTTTAGTGGCTGGTCAACAAAAGGACCTACAGCCTACACCCAGCACCCTGCATTGTATACAGTCGACAATGTCACCAGCTGCCTCCCTTTCAGTGTTAGAATCCCCTTCCCACAACTCTTCTGTGATAGTAAACTTAAGAGATCCTAAGGCAGGCTCCCTCTTCCCACTACCCTAGCACCTTCAGGTTTAGATGAGAGTAAGTTTTATATTGGACTTCCCTGGTGGCTCAGACGATAAAGCGTCTGTCGTGCGGGAGACCTGGGTTTGATCCCTGGGTTGGGACGATCCCCTCGAGAAGAAAAGTTATCCATCCTTTTTGGT EMBV3_01711 CGGCGGCTCTTCGGGGTGCTCGGCTCCCTCCCATGGAGCCCAATGATAGTACCAGTACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24450 CTATGACCGGGAAGTAGTTAGAGTTTGGTTCTGCAATAAGAGGCAAGCCCTGAAGAACAC Gene GeneID:517861|POU6F2:NM_001102046:25_cdna Constitutive 0 NULL GeneID:517861 4 GENE POU6F2 MGC165963 POU class 6 homeobox 2 EMBV3_29431 GAGAGGATAATCCTGTCTGTCATTTACCAGATCACTGATGGGATGCCAGTGGCGCCCCCC Variant GeneID:787651|LRRCC1:XM_002692804:109_cdna 725^900 1 EMBV3_29223 GeneID:787651 14 GENE LRRCC1 NULL leucine rich repeat and coiled-coil domain containing 1 EMBV3_06460 AGAGCCTCTCAGTCTGTGCTTGCCGGCACTCACAAGACATGTCTTTCAGCTGATGTCATT Gene GeneID:524306|FAM120B:NM_001102507:11_cdna Constitutive 2 NULL GeneID:524306 9 GENE FAM120B CCPG MGC143258 family with sequence similarity 120B EMBV3_30988 GTCCAATGTCAAAAAGAAGCGGTTGATAATTCCAGACTCTTGCTGGGTGACTGGATGGGG Gene GeneID:100336077|LOC100336077:XM_002694324:64_cdna Constitutive 0 NULL GeneID:100336077 17 GENE LOC100336077 NULL protease, serine, 21-like EMBV3_11884 TGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGAAGAGTTCGGTCCACACGCTTTGCCC Gene BVT0102_202908 + 0 NULL GK000020.2:59560956-60933152 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220566 TCONS_00232830 TCONS_00238581 TCONS_00118040 TCONS_00220596 TCONS_00210913 TCONS_00203981 TCONS_00203997 TCONS_00166911 TCONS_00230720 TCONS_00219592 TCONS_00203989 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00196822 TCONS_00123823 TCONS_00001867 TCONS_00203986 TCONS_00118458 TCONS_00174808 TCONS_00174809 TCONS_00203985 TCONS_00203977 TCONS_00174807 TCONS_00232829 TCONS_00055559 TCONS_00071095 TCONS_00107436 TCONS_00078426 TCONS_00203998 TCONS_00203980 TCONS_00174805 TCONS_00171428 TCONS_00206300 TCONS_00205125 TCONS_00174806 TCONS_00036107 TCONS_00232824 TCONS_00056149 TCONS_00203984 TCONS_00203994 TCONS_00203979 TCONS_00203978 TCONS_00160961 TCONS_00125692 TCONS_00197394 TCONS_00203976 TCONS_00203987 TCONS_00203995 TCONS_00001866 TCONS_00031759 TCONS_00110426 TCONS_00206299 TCONS_00203990 TCONS_00218430 TCONS_00246741 TCONS_00117924 TCONS_00001865 36 XLOC_133883 XLOC_142312 XLOC_145248 XLOC_072206 XLOC_133913 XLOC_129423 XLOC_124314 XLOC_101747 XLOC_140210 XLOC_132911 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_118487 XLOC_075375 XLOC_000454 XLOC_072622 XLOC_104695 XLOC_033367 XLOC_042868 XLOC_063346 XLOC_047314 XLOC_103815 XLOC_124877 XLOC_124587 XLOC_021081 XLOC_142307 XLOC_033952 XLOC_097854 XLOC_077234 XLOC_119055 XLOC_018004 XLOC_066330 XLOC_131750 XLOC_151107 XLOC_072090 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_36544 CCGACCTCCCTCTTGTAGATGTTCTTTTTGACCTGCCAGTAAATGTGGATGGCAAGCTCC Gene BVT0101_003319 + 0 NULL GK000028.2:28079128-28124688 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160461 TCONS_00160464 TCONS_00160465 TCONS_00160462 TCONS_00160463 1 XLOC_097667 Coding TCONS_00160461 XLOC_097667 Coding Coding PSAP 28:28123705-28157120 j TSS119997 2311 1 TCONS_00160461_2 411 13 0.931226432034477 0.0113275014694857 0.00882241963175655 0.0101523305782433 0.00217721783690353 0.00303183200646502 0.00188301569435862 0.00126892823628613 0.00276897738122119 0.00471324934914787 0.00356109530784665 0.00252020351637904 6.76729108935332e-05 0.00092163741393939 0.00141899822668112 0.000604576003289649 0.318974753423582 0.0969978121157283 0 0.0127006469321249 0.0262921862109753 0.00709388060465156 0.123714116044256 0.0956209362161073 0 0.0191372556465725 0.0171572790161782 0.00801192893661804 0.0212826569092261 0.0153802960675378 0.0367100806216652 NM_174161.3 PSAP Bos taurus prosaposin (PSAP), mRNA. 0.0 1810 99.51 0.439203807875379 NM_002778.2 PSAP Homo sapiens prosaposin (PSAP), transcript variant 1, mRNA. 0.0 1150 85.14 0.439203807875379 TCONS_00160461_2 sp|P26779|SAP_BOVIN SAP_BOVIN Proactivator polypeptide; 0.0 678 85.82 0.909975669099757 3 coding 0 0 0 0 -0.188351610005229 0.243460999001055 0.0184139301216377 0.775155686243538 TCTGCATTGCAGACTGCGGACTCCGGTGGCGCCATGTACTCGTTCTTCGTCCTGGCCAGCCTCCTAGGCGGGGCTCTCGCCAGCCCCGTCCTGGGCCTGAGGGAATGTACCAGAGGCTCGGCCGTGTGGTGCCAGAATGTGAAGACGGCGGCCGACTGCGGGGCCGTGCAGCACTGCCTGCAGACCGTCTGGAGCAAACCGACTGTGAAATCTCTTCCCTGCGACATATGCAAAGATGTCATCATTGCAGCTGGTAACCTGTTGAAGGACAACGCCACCGAGCAAGAGATCCTCATGTACTTGGAGAGGACCTGTGACTGGCTCCCTAAGCCGAACATGTCTGCCTCCTGCAAGGAGATCGTCGACTCATACCTCCCAGTCATCCTGGACATGATTAAAGGACAGATGAGCCATCCCGGGGAGGTGTGCTCCGCTCTCAACCTGTGTGAGTCTCTTCAGAAGCACCTGGCGGAGCTGAATCACCAGAAACAACTCGAGTCCAATCAGATCCCGGAGCTGGATATGGCTGAGGTGGTGGCTCCCTTCATGGCCAACATCCCCTTCCTCCTGTACCCTCAGGACGGCTCCCACAGCAAGCCCCAGCCCAAGAAGGCTAATGGGAACGTCTGCCAGGACTGCATTCAGCTGGTAACCGACGTCCAGGAAGCTCTGAGGACCAACTCCACCTTCGTCGAGGCCTTGGTGGACCACGCTAAGGAGGAGTGCGACCGCCTGGGGCCTGGCATGTCCGACATGTGCAAGAACTACATCAACCAGTATTCGGAAGTTGCTATCCAAATGGTGATGCATATGCAACCCAAGGAGATCTGTGTGCTGGCCGGCTTCTGTGACGAGGTGAAGGAGATGCCCATGAAGACCCTGGTGCCTGCTGAGGTGGTCTCAGAGAACGTCATCCCCGCCCTGGGGCTGGTGGAGCCCATCAAGAAGGACCCAGCCCCTGCAAAGGCTGACATTTACTGCGAGGTGTGCGAGTTTGTGGTGAAGGAGGTGGCCAACTTCCTGCCGGACCAGTACCGGAAGCAGTGTGACCAGTTTGTGACGGAGTATGAGCCAGTGCTGATAGAAATCCTGGTGGAGGTGATGGACCCTTCCTTCGTGTGCTTGAAGATTGGAGCCTGCCCAGCAGCCCACAAGCCGCTTTTGGGAGCTGAGAAGTGTGTCTGGGGCCCGAGCTACTGGTGCCAGAACATGGAGTCGGCAGCCCTGTGCAACGCCGTCGAGCACTGCAGGCGTCACGTGTGGAACTAGGGGCACGTTCCGTCCTGGAGAAGCTGCAGCGTCTTTTCCTGCTCGTGTGTCTGGGGGAACGAACACACATCTGTTGACTTTGTTATAGAAATAGGACCCCCTCTCCCTCAGTCCCTTTCTTCTCCCCCTCTTTGTGGCGTTGCTGTCAGTGGCATGCTGACGTCGTTGCTTTGGTGTCCCTTTCTCTGCTAGACAGATGCCGACACGCGTACACTGGAGGTCTTCTGAGTCTGTCCCGAGTCTGTCCCTGCGTGTGGTTATGTGGAGGAGAGGGGGCTCTGGCTGGGACGTGAGCCGGAGCCTCCGGACGGAGGTGGCCCGTCCTCCTGGCTGGGCTTTGGGTGCTGGGGCCTCTGCCTGCTCTAACGAAGGAGTCGAGTCACCACCCCCTTTTGCGGGCCTGCTGACTGCAAAACAAAGGCAGTTTTATATGACAGATGGGAGACTTAGAATAATGAGGCTATTTAAACAATGCGGTTCTCACTGTAACAGAGCTGGGGGGGTGGGGGGGCGGCTCGCTACCCCTGGGTCAACCTTCAGTTCGGCTTTCTTGTCTTTTCTGATGGATGTGGTTTTGGAGTTCTGTGGTTCTGGGTGGGAGGGGAAAAAACCAGTTCAGCTGAACGCGCCCTGCTAGCTCTCTGTGGAGGGCCTGTGGCTGCCTGTGTGCGTGTGTGGGCCCTCGTGGCGCCTCCTGCCTGCTCGTGCCCACCCTGGTGCCCAGCGCCAGCACCGCTCTGGGCAGGACGGCCCCTCCCCTCCGACCTCCCTCTTGTAGATGTTCTTTTTGACCTGCCAGTAAATGTGGATGGCAAGCTCCTAAGCCTCTGGCTTCCAGGTAGAAAAGGTCTGCTGGGTGTGCCGTCCCAGGGCCTCGGCTGCCGCCCTGCCTTCTTCTCTCCTGTTTGGCTGCTTCTGTTCCACTTCCGGTTGCCAGGAGAGAGCAAGACATGCGGTTGCTATTAAATGAACTTAATGATTTTTTGGTTTGTTTTGCACTAGAATTTCTGTGATTTAACAATAAAGTCTGTCAACCACAGCC EMBV3_40144 CAGTGCAACTGTTGATAAGACCCTGAAGTGTTACTTTATAAGCTCATGGCAAGGCTCTGT Gene BVV0101_027539 + 0 NULL GK000002.2:36508296-36557430 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33540 TCATGATGGAGAAGGATAGGTCAGGAACCAACCACGTCCTGAGTCACCAGCAAGACATCA Gene GeneID:781667|LOC781667:XR_083618:47_cdna Constitutive 0 NULL GeneID:781667 3 PSEUDO LOC781667 NULL similar to NEPH1 protein EMBV3_33160 TGAAACTACAGCTGCGAGACTGGAACGTATCAAACAGGAAAAAGGTACTTTCTGGGAGCC Gene GeneID:784034|LOC784034:XM_002707736:144_cdna Constitutive 0 NULL GeneID:784034 16 GENE LOC784034 NULL similar to Uncharacterized protein C1orf112 homolog EMBV3_00233 GTGATTCTACAGCTGCTGCATGTGTTCTGGTCTTGGCTCATCCTTTGCATGATCTACAGC Gene GeneID:505233|LASS4:NM_001015520:27_cdna Constitutive 1 NULL GeneID:505233 7 GENE LASS4 MGC143234 LAG1 homolog, ceramide synthase 4 EMBV3_20267 CCAAGGAAGACAAGTACCCCAATGACACTGGTTGCCCTGCTCCCCAACAGCGCTGCCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11600 AGGTCCGCTACGTAAATCGCTTCGCTGCGGGTTTCTGTAGCTGGATCCAGCACCGGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42304 CCCAAAGCGGTAACAGTTCAGGAGGTTTCCACTAGTCAGCATCTATCCTAAGGCTACACC Gene BVV0102_043232 + 1 EMBV3_15993 GK000024.2:33047757-33072796 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140033 1 XLOC_085046 NonCoding TCONS_00140033 XLOC_085046 NonCoding NonCoding - 24:33064628-33066005 - TSS104620 1377 1 TCONS_00140033_2 155 0.129992737835875 1 0 0.0002528728030027 5.83787792305254e-05 0.000739245333738569 0.000277408314713358 1.79254459951384e-11 0 0.00016424356369678 0.000141747691173656 0.000137518704647791 0.000131472669275661 0 0 0 0 0 0 0 0 0.000213514150633334 8.70780742533358e-14 2.46834349034757e-06 0 0 0 4.34539132545023e-05 2.39176966428628e-25 0.000873700705280988 6.97544221359229e-06 0 0 XM_613406.7 ALG11 PREDICTED: Bos taurus ALG11, alpha-1,2-mannosyltransferase (ALG11), 2e-63 248 90.96 0.127814088598402 0 noncoding 0 0 0 0 -0.136833654649853 0.297328406040044 -0.0174820018765925 0.703267915194889 TTGTTATAGAGCGAATACTTTTATTAAACAGGACATCACATTCCATTCCATTTTAGATCTTCCTAGAAGATGATCCTGTTGCTAGCATCCAAACCAGTTATCTCTCTGACAGAAAATCTGCATTAAATAAGGGTAGGTGTAGCCTTAGGATAGATGCTGACTAGTGGAAACCTCCTGAACTGTTACCGCTTTGGGAGGAACCAGCTGAGTAAAACCAGCTGCTTCTGACGTTGTGTCTCCATGGTTGCATAGTTACCTAGCACAGGTTGCAGTTGAAGCTTTTGAGATATCACTCCTAGGGTGCTAACCATTGACAGCACCTTTTCATGTCTAGTCTCTTCTCACCTTTGACCCTTACCCCAGGCTGACCCTCTGGTGCAGGGGAGGGGAGGCTGACCCCTAGCCTCCCTCTGACCTTGACTGTGTCTTGCTGCCTGCTGTGGGTATTCTTTGCAAAGTAGTTGCCAGTTGCTACAGCTGTTGCACATTAAAGGCTCCGCTTTTAATTCAGAGACTTGAAAGGCTGTAACCAGCGAACTCATAGGATCTACCACTGCCGCATCACCTGAGATGTTGGTTGTGGGATGGAGTCAATTGAGGAGCGGGCACCTGCGCAGCCAACCTCCCTGGTTTCCCACTCCTGAGCCTGCTGTCCCACCGGTGACCATAGGGGGCGCTGTGCGGCGTTATTAACCACGCCTCCCCGACGCCTCCAGATTTCACCAGGAGTCGTGGAGCAAGCAAGGTGTATGCTGGCTGGTGCCTGGTCCGAGCTTGCCTGTCAATCGTTTTGGCCGCAAGAGGTTAGTCTTTGGTGAGGGAGGGACCACCGGAAGGAGCTGCAGTGGGGGCTGCAGTAGCTGAGGATCCAAATCCAGGGCCAGGTGGGCCAGGGCGGTCCCTTTGCCGCGATGATCGAAACTGAAGGATCCATAAGGCGGAGAGTCCTTCAAGCATCTTCTCCCGCGCGTGGGAGCGTTCTCATTTTTTTTGTTGTTCAGTCGCTCAGTCGTGTCCGATTCTTTGCGACCCCATGGACTGCAGCACTCCAGGCTTCCCTGTCCATCACCAACTCCCAGAGCCTGCTCAAACTCATGTCCATCCAGTCGGTGATACCATCTAACCATCTCATCCTCTGTCGTCCCCTTCTCTTCCTGCCTTCAATCTTTCCCTACTGTTTATATTCTGTTGTTGAGTTCTCACTAATATCTCAACCACTAATGCGGGTCCCTTTTGGTTTCGTGCCCCCTACAGACGTAGGAGATGTAGAGGGAAGTGTATGTTGTGAGCTGAGGGGAAGGGCTGGAGGCCTGGCCCTGGTTCTGATTGGAGCTGTCGTCTTTGGCAGGTTTTCTCACCCCGGGGCGGGAAAGGGGG TCONS_00140034 TCONS_00140035 s 3' 5264 TCONS_00140034 TCONS_00140035 s 3' 5264 EMBV3_00255 CAGGAATCTACGGCTCCTATAAGAATTTCCTCCGCCACTTGGTCATATACACGGACCGAG Gene GeneID:100295741|LOC100295741:XM_002697929:586_cdna Constitutive 0 NULL GeneID:100295741 25 GENE LOC100295741 NULL hypothetical protein LOC100295741 EMBV3_03758 AACAGCAGCTCTGAACATGTGCCTGGTGGCCGCTGGGGCTGCGGACGCGTATTATGAAAT Gene GeneID:281865|IMPA1:NM_174361:9_cdna UTR3_Alt 3 NULL GeneID:281865 14 GENE IMPA1 MGC140630 inositol(myo)-1(or 4)-monophosphatase 1 EMBV3_06026 CCCGGCCAAAGACTCGCTCTGACGCATGGACTCGAGAGATGAAAACACTTTGTGCGAATA Gene BVT0102_182325 + 0 NULL GK000014.2:1567002-1602473 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15815 CAAGAAGCACGCGGGCGAGCGCGACAAGAAGCTGGCAGCCAAGAAAAAGACGGACAAGAA Gene GeneID:617703|UBE2S:NM_001076472:187_cdna Constitutive 4 NULL GeneID:617703 18 GENE UBE2S NULL ubiquitin-conjugating enzyme E2S EMBV3_14059 CTGTGTCAACATCCCCATGATGCGCCAGCAAGAGCTGCAGCCATAGGCATCACTCAAGTG Variant GeneID:513450|SFXN2:NM_001034446:123_cdna 659^719 1 EMBV3_43512 GeneID:513450 26 GENE SFXN2 NULL sideroflexin 2 EMBV3_36945 ACACTCAGTACGCAGAGAAAATGCTCCATGAGATTCAGCGCAGGGCACAAAGACAGAAGG Gene GeneID:615711|TAF7L:XM_002699822:76_cdna Constitutive 0 NULL GeneID:615711 X GENE TAF7L NULL TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa EMBV3_07138 CTCCTAAGAGACCAAGGGGAAGACCCAAAGGCAGCAAAAACAAGAGTCCCTCCAAAGCAG Gene GeneID:100297155|LOC100297155:XM_002687648:825_cdna Constitutive 0 NULL GeneID:100297155 5 GENE LOC100297155 NULL hypothetical protein LOC100297155 EMBV3_17570 CAGGTGTTGCTACTCGCCACTTACTTCTTGGAGCTCTCTCTGCTTGAGGCCGAAGCCGCA Gene GeneID:613755|CNTD2:XR_083919:180_cdna Constitutive 0 NULL GeneID:613755 18 PSEUDO CNTD2 NULL cyclin N-terminal domain containing 2 EMBV3_05559 GCAGACCATGCACGAACTGGAGATGTCAGGGAGGATAGCCAAAAGCCATGATACAGTTTG Gene GeneID:539296|SLC25A2:NM_001144086:17_cdna Constitutive 0 NULL GeneID:539296 7 GENE SLC25A2 NULL solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2 EMBV3_17914 GCGGACCGCGCAGCCGCTTGTTCTCTTCAGATAAGAGCTGCAGACAAGACCAAGAAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28242 CTTCTTAAAGAAGTCGACTCGACTGTGACTTGAGATACACAAAACATTTAAGTGCCAGAC Gene GeneID:100125265|GALNT4:NM_001103321:2_cdna Constitutive 1 NULL GeneID:100125265 5 GENE GALNT4 MGC151803 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) EMBV3_33116 TTTATCAGATTGCAAACTCCTAGAGTCTACGTGCAAGACCAGTGAAGTCTTACGGAGTCT Gene GeneID:100337287|LOC100337287:XM_002693102:488_cdna Constitutive 0 NULL GeneID:100337287 15 GENE LOC100337287 NULL zinc finger protein 76 (expressed in testis)-like EMBV3_27527 CGCATTGAGCTCTGGGACACAGCGGGACAGGAAGGCTCTGACTTGGATTTCTGTGGTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42726 GCACGTATGCGCACTCTTTTGATAAAGGGCAGTAACCAGTATTAGGGCCTATCTAAAACC Gene GeneID:515118|RHOB:NM_001077922:129_cdna Constitutive 0 NULL GeneID:515118 11 GENE RHOB NULL ras homolog gene family, member B EMBV3_38164 CAGGTTGTACGAGGGCACTACAAAGGGCAGCAAATTGGCAAAGTAGTCCAGGTTTACAGG Gene GeneID:782136|LOC782136:XM_002692441:449_cdna Constitutive 0 NULL GeneID:782136 13 GENE LOC782136 NULL similar to ribosomal protein L26 EMBV3_10875 GGGACAGAATGGGCAAGAGCCTATAAAACAGACAGGAGTAGGCATTGGACTAGCAGACAC Gene GeneID:517284|LOC517284:XR_084685:24_cdna Constitutive 0 NULL GeneID:517284 4 PSEUDO LOC517284 NULL similar to piccolo EMBV3_14967 CCATGCGTTCCCAATTAGTATTTAGGTTGGTGCAAAAGTAATTGTGGTTTTGCATTGTTG Gene BVV0102_049851 + 0 NULL GK000006.2:85877750-85900616 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203654 TCONS_00203652 TCONS_00203657 TCONS_00203651 TCONS_00203653 TCONS_00203658 TCONS_00203656 TCONS_00203650 TCONS_00203649 1 XLOC_124223 Coding TCONS_00203658 XLOC_124223 Coding Coding YTHDC1 6:85870052-85880544 j TSS152501 4726 1 TCONS_00203658_1 217 0.0937367752856538 7 0.550185873605948 3.48078283200749e-05 1.26535635824065e-29 2.59814670285877e-05 6.93470605938191e-35 3.08572150150954e-05 1.65397847698068e-30 0 4.01398764277736e-05 6.16277425200384e-05 6.98474497058327e-05 0.000307748640755665 3.78160637878835e-05 1.22724062849178e-05 2.72921825252197e-05 9.51033058115523e-05 0.00117550664415419 4.3455009783058e-34 0.00272530070478601 1.69954776096452e-05 5.57607763359269e-41 2.94669661461327e-304 0.000225241507408261 0.000132133390238322 0.000532205108881613 8.31402280959397e-41 3.94511014723591e-05 7.36940278578584e-06 0.000150470405956648 3.76178121440215e-05 5.3980021954547e-05 XM_005208044.1 YTHDC1 PREDICTED: Bos taurus YTH domain containing 1 (YTHDC1), transcript 0.0 2506 100.00 0.293694456199746 XM_005265706.1 YTHDC1 PREDICTED: Homo sapiens YTH domain containing 1 (YTHDC1), 0.0 2069 93.36 0.293906051629285 TCONS_00203658_1 sp|Q96MU7|YTDC1_HUMAN YTDC1_HUMAN YTH domain-containing protein 1; 2e-71 234 93.24 0.67741935483871 0 noncoding 0 0 1 1 -0.01509580341457 0.919824363994262 0.0554461174322646 0.667200885244551 ACTTGTTACAGAATTGGAGAAGTCTTTGCAAAGGACTGATTTAAGCCCTTCACCCAACACCTTACCCTGAGTAGATTTGCATACAGCTAAATCTAAAATATTCTGCTAAAGACTGTTGGATGTGTGGTTGATGGGATGAAACCTTTGGTTAAGTTTCCTTTTGGTGGAAACATCCTGTGGTAGGTACAGATAATCCAACAAGAGTCCCCTTTTCTTTGAGCTTAAGAAGGACACTGTCAAGTAGGTAGGAGGAAACCTGGCAGAGCCCCCTTACTTTTGGCCTAAAAGGACTGATCACCAAGATGTCTTTTGAAGTTTTAAGCTAAGAGATTTCCAGTGCAATACAGTACATACAAGTGAAGTTTTTACCTCAGATTTGCAATGGACTGTAAACTATACTTATTACACCACTACTCCTCTCAAGCCTGCCAGGGCCTCCATATTTGTATGTGGCTTACAGCTTAAAGTCAGTAGTTGGACTACTTTATGAACTGTTACTATCATGTTTTATACCGGTCGTAAATGCACTCCCCAAACTACAGGAAAGCGGCGTCGACCAGAAGATTATGATATTCATAACAGCAGAAAGAAACCAAGGATTGACTATGCCCCTGAGTTTCATCAGAGACCAGGGTATTTAAAGGATCCACGATACCAGGAAGTAGATAGTTTCACAAATCTTATTCCCAACAGACGGTTTTCAGGAGTTCGCCGAGATGTATTTTTAAATGGGTCCTACAATGATTATGTGAGGGAATTTCATAACATGGGACCACCACCACCTTGGCAAGGAATGACTCCTTATCCTGGAATGGAACAGCCTCCACACCATCCTTACTATCAGCACCATGCTCCACCTCCTCAAGCTCATCCCCCTTATTCAGGACATCACCCAGTACCACATGAAGCAAGATACAGAGATAAACGAGTACATGATTATGATATGAGGGTGGATGATTTCCTTCGTCGAACACAGGCTGTTGTCAGTGGCCGGAGAAGTAGACCCCGTGAAAGAGATCGGGAACGAGAACGAGACCGCCCTAGAGATAACAGAAGAGACAGAGAGCGAGATAGAGGACGTGATAGAGAAAGAGAAAGAGAGCGATTATGTGATCGGGACAGAGACCGAGGGGAGAGAGGTAGATATAGGAGATAATGCGCTTTTGGAAGCACTGATTGTTTAAAGATACAGAATCTTGTATTTTTCTTTTTGTGTGTGTTTACAAGTAGTAAATTTATTTTCAACTGTCTACTTAAAGTTCATTGTGTAGAAGGATTTATTATGACCCTCTTTGTTCCAAGCATGCAGTATAATAAGAACTGGAAAAACTCAAATCCTCCAAAAATGCACAGTTGACAGTTTGAGTTGACACTTTTATTGGGACAGAATGGAACAGTCCAAGAATGTAGATACTGATTCAGTCTCTGTAAATCTTCATCTGCTTATAGGGTGTTCATCCTAGAGTTATTTTTTGTTCATTTTCTTTCTTTTGGATCTTGATTGATGACTGCCATGATATTTTGCTTTGATGTATTTCTAAATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCAAGTATGCAAATATTGAAGTATGATGGTTTGACTCTATGGCAGTGTTGTAGCAGCCTCTTGGTTTCTCCCTTTCCCTCTTTTTTTTAATCTTAAAAAAGTCACTTTTTATTTTTCTTCGTCTTCAATGATGAGAGCAATATTAAGAAGACATTGCTATCTAATTTTTAATCTTTTTAGATAGGAAAACTTCTTATGTTCAGTAGCATGGTTGATGCTATTGGTTTAGCCTTCTCCTCCAAACTGTATACATTGGCTTGGAATGTTCACAACCTGCGTGTGTGGCAGCAGAAGATAATTCCCATATTCTACATTGCTACTGTTTTGTATAAAATAAATTGGTAAAGATTGACACTTATCTCTTGTGTTTCTTTCTTGTCTGAACGCAAGTTTGTTTTCTTGTGTATGATGTATGGGTTGGCCAAAAAGTTCATTTGGCCAAATAGTTCATTTGGGTGTTCCATATGATGTTATGGAAAGACCCAAATGAACTTTTTGACCAACCTATTAGTAGACATAAGAGAATGCTTTGTGCTTAGAAATTGTTGGACCCCCATTTGTCTTTTTTGCATATTTTATCGAAAATGATTAACCTAGGTCAATTATATATAAATGCTTACTTTTGTTTCTAATATAAGAACTAATGGTACATAGTGGAATTTCATTGATATTTTGGTTAAGGTATTCATTTGGTAGCATTTTTGGATCTACTTTGGTTACAGGATTATTTTGTTTTTTTCAGGTTTTGTGTTCATCTTTGATAAGTTAGATATTTCATATTTTACTTTTAAAATACACCTTTAAAATTAACCCTCATTAATCCCTCTCAGTAGTAACAAGCTATATAAAATATAGTTTGTAAATAAATAAGTTTATATTTAAAAAAATAAAAGATTAAAAATTTTTTTTCATAAATCCACATGTTTATTTATTTACTTTTTAGTAAGTTTAAATACTTAAAGGATGCAACATCACACAGGTTCTATGTCCAGTAGCAGGAAGGTTGCTTTGAAATTCGGCACGAACCATGCCACTGTTGCTATGAGCGTGAGTTATCTTTTTCCAGATTACTCTGATTTTGTTAGGTTATCTGCCAGGAGTTACTGTGATGTTCTCTGCTTTGTGCACATAAGCAGATCACTTGCCTAGATAGAATTCATCCCAAGCATATACACCTTCAGTTTTCAGCAGAGCTGTGTGCTCCCTCTGGTTCCACAGACCCCACTTTTAGCCAACAAAAATGGCCTTGTACCACAGCCTTCCAGACATAGCTGTTGTTTTAGACATCCTGCTCCCAGCAGGCCTCCACAGGATCCAAGATGGCTGAAAGAACTGTATTTTAAGTTACCATTTTGGCCTTTGTTATGTTGAATATTTAAATATTTGTGATATTTGCATGTTTGATCACATTTTTTCATTTTCATACACTGTCATAATTCTGTGCTAAATCATGTTCATAATAGTGTCAAAAGAACACAAGAACTTCACTGTTGAATGATTTTTAAAACTGTCAGCTTACTGCTTTCATATTCTCACTGACATTTAGAATATTTTTCCATGCGTTCCCAATTAGTATTTAGGTTGGTGCAAAAGTAATTGTGGTTTTGCATTGTTGAACTTTGTCGTTTGATATTGAAATATATTCTTAAATAAATGTTATGTTTACATCATTTTAGCACATTTCTTGCCTTATATTTCTGCTGAAGATTTATAGCTGTTTAATTTAGACTAGAGAAATGATGTTAGACAAAAAGCAAATTCAAGCGATTTTCTAATTGAAGTTCAAAATGGTTTTTATGCAACAACCAGCTCTGGTTGGACCAAGAAGCTCCAAAACACTTCCCAAAGCCAAACTTGCACGCCCAAAAGGTCATGGTTACTGGTGGTCTGTTGTCAGTCTGATCCACTACAGCTTTCTGGATCCTGGCAAAACCATTACATCCAAGAAGTGTGCTCGGCAGATCGCTGAGCTGCACTGAAAAGGCCCAGTTCTCTCCACAATGTCTGACCGCTCAACCAGTGCTTCAGAAGTTGAAAAAATTGGGCTATGAAGTTTTGCCTCATCCACCGTATTCACCTGACCTCTTGCCAACTACCACCTCTTCAAGCATTTTACAACTTTTTACAGGGAAAATGCTTCTACAACCAGCAGGAGGTAGAAAATGCTTTCCGAGAGTTCATTGAATCCTGACGCATGGGTTTTTGTGCTACAGGAATAAGCAAACTTGTTCCTCATTGGCAAAAATGTGTTGATTGCAGTGGTTCCTATTTTGATTAATGAAGATGTGTTTGAGTCTAGTTATAATGACTTAAAAATCACAGTCCAAAACCACAATTAACATTTGTACCAGCCTAATAGATATATATTGTTCAGTTGCTCAGTTGTGTCTAGCTCTTTGTGACCCCATGGACTGCAGCACATCAGGCCTCCCTATCCTTCACCATCTCCTGGAGCTTTCTCAAAAACTCATGTCCATTGAGTTGGTGATGGAATCCATTCATCTTGTCCTCTGTCGTCCCCTTCTCCTCCTGCCTTTCAGTCTTTCAAAAAAAGGATTTATTTTAAATCTCTGCAGTGGGGTTGAGAAGAAAGAACACTTATGTATTAAGAAACCTGGATTCTGAATCAGCATTGCCTTTGATTAAACCAATTGGTAATAAATTTCACTAACATTTTGTTTATATTCACCAGTACATTTTACAAGTTAATATCAGTTCAGTTGCTCAGTCGTGTCTGACTCTTTGCGACCCCGTGGACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGCAGTTGACTCAAACTCAATGTCCATTGAGTTGCTGATGCCATCCAACTATCTCTTCCTCTGTCGTCCCCTTCTCCAGTCTTTAATTTTTCCCAGCATCAGGATATGTGTACATATATTTAATTCATTGACCCAACCATCATAAAAAATTTTGCTTCTTTCCACATCAGCCGTATTTTTTATCTCAATCCCTCCACTGAGGAATTGTGACCACTATCTTTAGCTTCAGAAAAAGCTTTGCTTGTCTCTTCATCTTCCTTTACTGCAGATTCTTTTACTTTTCTCTTTGCCAGCACTTTGGCTGTTCTAAATTGCTAGTCTGATGGGATGACATGAACCTTGACCCTCAAAC EMBV3_30861 CCCTGAGCCAGCTTCCTGAGATAGAAGATATGGAAATCAGTCTGCCGAACATTCACTACT Gene GeneID:514113|UOX:NM_001075648:41_cdna UTR3_Alt 2 NULL GeneID:514113 3 GENE UOX MGC128791 urate oxidase EMBV3_23153 ACTATTCTGCGAATGAGGAATTCAGACCAGGTGGTATCCCGCTGCCTGGAGCTGGGGGCG Variant GeneID:282589|HSD11B1:NM_001123032:22_cdna 146^276 3 EMBV3_10464 GeneID:282589 16 GENE HSD11B1 NULL hydroxysteroid (11-beta) dehydrogenase 1 EMBV3_42904 GACATAAGAAAAGACTGGCCTAGGAACTTGGCGGTCCAGTGGCTTAAGACTCCACATTCC Gene GeneID:507533|CRCP:NM_001077870:266_cdna Constitutive 1 NULL GeneID:507533 25 GENE CRCP MGC142463 RCP9 CGRP receptor component EMBV3_04711 GCTTCAACTTCAAAGCCAAGGTTTTCAGAGGCTCACCATCAAGTGTATCTCACTCATCAC Gene GeneID:509460|THUMPD2:XM_002691293:389_cdna Constitutive 2 NULL GeneID:509460 11 GENE THUMPD2 NULL THUMP domain containing 2 EMBV3_07042 CACCACTCTGGTCGGAGGCCCCGAGTACGTGCACTCCCCCTCCGACCTTGAGGCCCACTT Variant GeneID:535321|PPP2R1A:NM_001037477:187_cdna 315^410 1 EMBV3_32876 GeneID:535321 18 GENE PPP2R1A MGC128399 protein phosphatase 2 (formerly 2A), regulatory subunit A, alpha isoform EMBV3_23431 CCAAGGACAAGCTCGAGGAAGCCAAGAAGAATAATGGGCTCTCAGAGTAATGTCTTAGAA Variant GeneID:613925|ATP6V1G3:XM_002694234:175_cdna 83^183 1 EMBV3_06390 GeneID:613925 16 GENE ATP6V1G3 NULL ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3 EMBV3_26364 CTGTGGACAGGCCTTTACTCGCAAAGAAAGCTACACAGTTCATCAGATCCTTCATACTGG Gene GeneID:100336734|LOC100336734:XM_002695290:85_cdna Constitutive 0 NULL GeneID:100336734 18 GENE LOC100336734 NULL zinc finger protein 45-like EMBV3_37693 ACGTCGAGGGGGACGTCTACGTGCTGGTGGAGCATCCCTTTGAGTATACGGGCAAGGACG Gene GeneID:618322|SH3D20:XM_002696081:30_cdna Constitutive 0 NULL GeneID:618322 19 GENE SH3D20 NULL SH3 domain containing 20 EMBV3_21131 GTTGGGTACAGTATGTAACTGCAGGAAACCCACTGCCCCTTTGTAAGTCGTGGAGCCCAA Gene GeneID:538236|IPO11:XM_002696305:21_cdna UTR3_Alt 2 NULL GeneID:538236 20 GENE IPO11 NULL importin 11 EMBV3_33557 TCCAACCACATCCATCATTTCTTCTGTGATGTTAAGCCATTGCTGGAGTTGGCCTGTGGG Gene GeneID:789690|LOC789690:XM_002707897:29_cdna Constitutive 0 NULL GeneID:789690 23 GENE LOC789690 NULL similar to olfactory receptor, family 12, subfamily D, member 2 EMBV3_38042 TATGCAGAGTGTTTCTCAGGAGGCCCTGAGGCTGATGGTGGGTGGATGACTCTTCAAGTT Gene GeneID:407172|CNGA2:NM_001001139:92_cdna Constitutive 0 NULL GeneID:407172 X GENE CNGA2 NULL cyclic nucleotide gated channel alpha 2 EMBV3_36439 TCTTTGACTACGGCACCAATGCTGCCATTGCATCCTGCACTCTGTCCTTGAATGTGGCCG Gene GeneID:508976|LOC508976:XR_084103:124_cdna Constitutive 0 NULL GeneID:508976 28 PSEUDO LOC508976 NULL similar to phosphatidylinositol glycan, class C EMBV3_22237 CTGCGCAGAGCGGCCAAAGCCACGGTGTTTGTACTTGCTAAAGAAGCTCCTCCAGCTACA Variant GeneID:507460|TBRG1:NM_001075315:8_cdna 349^419 1 EMBV3_03795 GeneID:507460 29 GENE TBRG1 NULL transforming growth factor beta regulator 1 EMBV3_40278 CATCAGTGCTGTTGGGTGGTGGCCCCCTGGCTGGTATTCTTTATTCTTACTCTAAGATAC Gene GeneID:788638|LOC788638:XM_002689039:113_cdna Constitutive 0 NULL GeneID:788638 7 GENE LOC788638 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_13298 ACATGTGAGTGGGTGTTTGGAGAACTGGAAAGGGTATCTGCATGAAGGCTCCTGTCTGAC Gene GeneID:782752|GTF3C2:NM_001102329:264_cdna UTR3_Alt 2 NULL GeneID:782752 11 GENE GTF3C2 MGC155253 general transcription factor IIIC, polypeptide 2, beta 110kDa EMBV3_07650 CAGTAGACTGCTAGACAACATGGCTGAGTTCTTTCGACCTACTGAACAAGACCTGCAACA Gene GeneID:515730|PEX3:NM_001098987:5_cdna Constitutive 0 NULL GeneID:515730 9 GENE PEX3 MGC166343 Peroxin-3 peroxisomal biogenesis factor 3 EMBV3_27342 TGCAGAACAACCGGAGGCTGTTTGAGCAGAATGTCCAGCGCTCCATGCGGGGTGGCTATA Gene GeneID:613343|UBE2M:NM_001083503:58_cdna Constitutive 0 NULL GeneID:613343 18 GENE UBE2M MGC151985 ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast) EMBV3_30824 TATGGCTCTGGACAGTGAAAATTGAAAAACGTATGCCAACCCTGAGCAAGGGAACACCTC Gene GeneID:614719|TMEM117:NM_001101233:90_cdna Constitutive 0 NULL GeneID:614719 5 GENE TMEM117 NULL transmembrane protein 117 EMBV3_03776 ATGGATTAAGAGAAGGACCGATTGACTTAGGTACAGTGAAGGTGAAATTCGATTTAACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01235 CACTAGACCTGCATTTTAGAGTCTCCCAGAGGCTGCCAGACTGAATGTATTTCTCCTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18315 TGCTTTTGAGAGCGGGGATAAGGGGGCTGTGCCTTCCACGTACATCTGAACCCAAACAAA Gene BVV0101_010948 + 0 NULL GK000018.2:1850874-1870811 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087962 1 XLOC_052750 NonCoding TCONS_00087962 XLOC_052750 NonCoding NonCoding - 18:1853414-1855512 - TSS65308 2098 1 TCONS_00087962_4 90 0.0910390848427073 1 0 0.000804150917581338 0.000684903170519804 0.000970391226535713 0.000617468131532006 0.000377700543649947 0.000419426114362302 0.000475320737394023 0.000433454991400433 0.00127490802338514 0.000241221257813136 7.98705344126754e-05 0.000110781576080332 0.000181894470189233 0.000152465369836628 0.000168373019272601 0.00280733596647575 0.00167763659586779 0.0019374290937206 0.000953617499772354 0.00124427609056467 0.00105049727565995 0.00130162377494865 0.00110630879180666 0.00172600585585074 0.000990726819154023 0.000522198141082645 0.000547375033878489 0.000709629213498511 0.00052294593261994 0.000524424023809252 NM_001110189.1 EXOSC6 Bos taurus exosome component 6 (EXOSC6), mRNA. 4e-111 407 100.00 0.106768350810296 0 noncoding 0 0 0 0 -5.61032685257369 0.010808578340849 -0.492506989841784 0.0274653834359326 NNACCCAGTTGAAGAAACCTGCCAGCGCATCTTGACCCCTAAGTTGGAGAGGACTTTCGCTGGGCTCATCGGGAAAACGAGCTGTTGTCCTGCAAGGGACGGACCCTATGCAGGCCAGCCTGGGACTCCCTCCTGAATAACTGGGCTGCTTTTGAGAGCGGGGATAAGGGGGCTGTGCCTTCCACGTACATCTGAACCCAAACAAAACCAATTTTTATAATCTGAAACATTCTTCTCTTGTTTTTGGTACTGACTTTAACGAGTAAGGCTCTTCTGAGCTGGGGAGTGTGTTCTCAGGGCTTGGGACAAGCATTATCTTTAATGTGTCCTGGTGTTGCTGGTCCACTGGTGAGAGGGCACTTGAAATGCCAGGAGTGAGAGTTTCTGGTTGCTGGAGATGGGCTCTGGCCATTCTGTAGACAGAGCGGGCCTGTCTGACCAGAGGGTGGCTCCTGAGCCCTGCAGGTTTGTGCTCAGGTCTGAATTGGCGAAAGGGCCGCCTGGGGTCCTCCCTGCACCAGCTTGGTGTGATCTGAGCTTGTGTGTCTCAGGGTAGGAAAGGCTGGCTCGAGGCAGCTGAGAGACCAGAATGAGGCCTGGGGACCACACCAAGAACCCCTGACGAGGGGGAAAAATACAAACTTTATTTGCCCCCAGTGACGTATATTTCCAAAGCAGATCTGAAATATATAGAACCACAGCAAAAAGAAACAAGATAGAAACAAGGTAAAAACGGTAACCCTGTGGACGCCCAGACAGGACGGGGGCTTTGAGAGGGGAAGAGAGCTGACGCTGCTCCCGGGGGTGAGCGTCCAGCTCTGCCTGCAGGAGCGGGCCCGGCTCTATGAGATGGTGCGCTGGTGCCAGGCAGCTGTGGGCCGCCCCGCTTCCCTGCAGTACCTAGACTGCCATTTGGACAAAGCTAAAGTGAAAGTGAAGTTGCACAGTCTTGTCTGACTCTGCGACCCCATGGACTGTAGCCCCCCAGGCTCCTCCTTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGGTGCCATTGCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCCAGGTCTCCTACATTGCAGGCATACGCTTTAATCTCTGAGCCAAAGCTAAAAGCAGCACTAAGGCCGGGTTCCTGGCCCGTCTGGCTGAGCCACGCCTCCATTTCCATCGCCCTGGCTCCAGAATGGGTGGCATGGGTGCCGCTGAGAGACCCTCAAGAAAACGCTCAAGGCAAGGACCGTGCCTGGAGCTGATGCGCCTGGAGGGGTTCCAGCCTGCTACTGACAGCCCTGGTCTGACGCCTGATTCTTGACCTGTAGGAGAAGCAGATGCAGGACCCTAGCACAGAGGGCCAAAGCGCGGTGAGGCTGGGAAGGGGCCATCTGTTAACAACTCCCAGCCTCCAACCCCCGCCTCCCTTTCCTGGCAGCTCTGGCATCTCGGTGCTACTGTAGATTCTTCCTGAGACCCGTGAACCCAGAAGCACCAGACACATGGCATTTTGTCCACTCGGCCCAGTTTTCCTAGAGGTGATTCCATCTTGGGGAGCACTAAAGGTCCCCTGGCCCAACAGGCAAGTGGAAGAAAGGAAGCTCCTTACTGCTAACCCTACAGCAGCCCAGCCTTGCTGAGAGGGTCCTGACAACGGCGGGAGCTTGGCCCACTTCAGGGGCCACCAGTAGGGGCGGAGGCTGTGGTAGAGTAGGGAACACTGGGGCTCTTGGGAGCTGCACAGAAGGCTATTATCAGGTCCAGGTTGGGATTTCTCAGTCCAGGAAGGCCCGTGTGCTTTGGCTTCCGTGGGGAGCACAGGACAATGCAAGGGAATTAAGGGGGGGGAATAGGACAGGGCCCTATCTTCCGGATATTGCCTGTGACAGAAGTCAGTCGCCTCCCTGTAGCCACTGCTGTGGTCTCCTGCACAAACAAGGACCCAACCAAGGAGGGTGAGGATGGGGGAGGTGCCAGGCCACTCACCGCAGCCTCCAGGTCTGTGTGCTCCTGGGAGCCGTCCGCCTCCAGATGGGCCCTCAGGCCTTTGGGCTCCTGCCTGGGTTCGGTGGTTCTGCATAAGGACC TCONS_00082070 TCONS_00082072 TCONS_00082074 TCONS_00082075 TCONS_00082076 . 3' 2531 TCONS_00082070 TCONS_00082072 TCONS_00082074 TCONS_00082075 TCONS_00082076 . 3' 4628 EMBV3_09827 GCAGTCAGAAATCAGGATTCGCCTTAACCAGTTATCAAGTCTGTGTCCTCCTCCACCAGC Gene BVT0102_138602 + 0 NULL GK000005.2:101909501-101996110 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196120 1 XLOC_118234 Coding TCONS_00196120 XLOC_118234 NonCoding Coding - 5:101967275-101982291 - TSS145996 324 3 0.978621378621379 0 0 0.000628357533859917 0 3.04763979892544e-05 0 1.79991596383695e-05 0 0 0 0 0 0 0 0 8.15174295199142e-05 5.1241604113135e-05 0 0.000616846083737226 0 3.26730742266126e-187 2.2903274460271e-05 0 0 0 0 0 0 0 0 XM_005207050.1 SLC2A3 PREDICTED: Bos taurus solute carrier family 2 (facilitated glucose transporter), member 3 (SLC2A3), transcript variant X2, mRNA. 5e-119 430 100.00 0.731481481481482 XM_005253313.1 SLC2A14 PREDICTED: Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 14 (SLC2A14), transcript variant X2, 2e-15 86.0 86.11 0.219135802469136 0 noncoding 0 0 0 0 0.114338925963938 0.469865213897079 -0.0722284769025816 0.293753694432852 CAAAGGAATGGCCTGTCCTTTGTCCCCTTCCTCCTAACAAACTCAGGAAACAGTGCTAGTGCTTCACCATACATCCAGCTGAGCCCCAGAACTATGCCCTCAAGTCAGGAGCGCTGGTGGAGGAGGACACAGACTTGATAACTGGTTAAGGCGAATCCTGATTTCTGACTGCACTGAAGCTCACTGAGGCAGTGTAGGCTCAGGAAGCAGTACCTTGAAGAAGAATTGGAGGGCGAGTCAGTTCTTAGTATAACAGAGAGATGGAGAGCAGCAAACAGGATGGGAACTGCCACGGAGTCTTCAGGTCTTTCTCAACCTACTTTC TCONS_00196118 s 3' 14253 TCONS_00196118 s 5' 0 EMBV3_03749 GCCTATCCCCATCTCCGCATCAGGTCCAAGACGAATAAAGAGAACCTGGACCACCACCCA Variant GeneID:282199|COX6A1:NM_001077831:15_cdna 264^339 2 EMBV3_17878 GeneID:282199 17 GENE COX6A1 VIA_L cytochrome c oxidase subunit VIa polypeptide 1 EMBV3_26321 GACGGAATTAAAGAAATCCACTGATGCCTATGAGCTGAGTGTCGCCAACAGGCTCTACGG Gene GeneID:511106|LOC511106:NM_001105619:14_cdna Constitutive 0 NULL GeneID:511106 24 GENE LOC511106 MGC179506 serpin peptidase inhibitor, clade B like EMBV3_29069 GCAGAAGTGTACAACGCTGAGAGTAATCAGTGGACAGTCATAGCACCCATGAGAAGCAGG Gene GeneID:541263|KLHL10:NM_001078033:210_cdna Constitutive 0 NULL GeneID:541263 19 GENE KLHL10 MGC151937 kelch-like 10 (Drosophila) EMBV3_34226 CCAGTGGGGAACCAGTGGAAGTTTTAAAGTGTGGAGCAACATCATTAGGGCTTGTGCTTG Gene BVV0102_045998 + 0 NULL GK000009.2:68845170-69015441 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17284 GTGACTTTGGTGCACACTGCCCTCTTATCTGCCTCCTGAGTCACATACTTCAAGACTCCT Gene BVT0102_035096 + 0 NULL GK000019.2:61814974-61873252 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17583 TGGAGTACTTGCTGTAGGATACAAGCTGTCTTTGCACTAGCTCTAAAGAAGATTTTCTTC Gene GeneID:528253|JARID2:XM_002697579:437_cdna Constitutive 3 NULL GeneID:528253 23 GENE JARID2 NULL jumonji, AT rich interactive domain 2 EMBV3_07680 GCCAAAATGATCCCTGGAGGTTTAACTGAAGCCAAACCTGCCACTCCAGAAATCCAGGAG Gene GeneID:617114|CSTA:NM_001167824:107_cdna Constitutive 0 NULL GeneID:617114 1 GENE CSTA NULL cystatin A (stefin A) EMBV3_33413 TCCAATTGCTTCTTAACACCTCCACTGCCACCAGCATCTCACTTCTATCCACCCCAAACC Gene BVV0102_197039 + 0 NULL GK000026.2:44715537-44719078 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23181 AACCTCCTGCTCGAGTTTGAAGCCAACGTGAACATCTTAACAAGAAACGGGGAGTCTCCG Gene GeneID:768013|ANKRD61:NM_001077072:335_cdna Constitutive 0 NULL GeneID:768013 25 GENE ANKRD61 MGC134404 ankyrin repeat domain 61 EMBV3_34384 CCCCTCTGTGACAATGCTGTATGGGGACCCAAGAGTTTCCCTACCTGTTCAGTCCATCTA Gene GeneID:505679|S100A16:NM_001075218:79_cdna Constitutive 2 NULL GeneID:505679 3 GENE S100A16 MGC140605 S100 calcium binding protein A16 EMBV3_03792 TTTCTTTCCCTAGCCACCGTTTAGGAGATGCCCCACCTCTCATCACCCCAGGTAAGACAG Gene GeneID:780807|FXYD3:NM_001079646:793_cdna Constitutive 0 NULL GeneID:780807 18 GENE FXYD3 MAT-8 MGC155105 FXYD domain containing ion transport regulator 3 EMBV3_28513 CGCCTCTGAGAACCTCTCGTCTTCTCAAGGTGACTTATAGTTGTGGTCACACTTAGCCTT Gene GeneID:100126041|COPA:NM_001105645:175_cdna Constitutive 0 NULL GeneID:100126041 3 GENE COPA MGC166118 coatomer protein complex, subunit alpha EMBV3_00826 TTATAAGAAGTTTCTGACTGACCACCTTCAGGACCATTCCACCCTGAACCGCAAGCCTGC Gene GeneID:100336961|LOC100336961:XM_002690154:2_cdna Constitutive 0 NULL GeneID:100336961 9 GENE LOC100336961 NULL activating signal cointegrator 1 complex subunit 3-like EMBV3_21077 GCAGTGACCAGTATGTGAATGATTTTTTGTCACGTTGATGTGATAGCACTGCGGCCCTCG Gene GeneID:407130|PPFIBP1:XM_002687731:47_cdna Constitutive 0 NULL GeneID:407130 5 GENE PPFIBP1 lip_beta1 PTPRF interacting protein, binding protein 1 (liprin beta 1) EMBV3_23706 AACTGCAGCTCCCAGGCCGTCTTCCCAGCCCCCTACCTCTACCTCGAAATCTATGGGCTC Gene GeneID:317756|GPBAR1:NM_175049:41_cdna Constitutive 1 NULL GeneID:317756 2 GENE GPBAR1 MGC152072 TGR5 G protein-coupled bile acid receptor 1 EMBV3_36624 CTACAGCCTGAGAAACAGGGACATGAAGGGAGCCTTGAGAAAACTCATCAATGGGACATC Gene GeneID:787319|LOC787319:XM_002688807:226_cdna Constitutive 0 NULL GeneID:787319 7 GENE LOC787319 NULL similar to olfactory receptor, family 7, subfamily G, member 2 EMBV3_06249 CAACTCAGTAGTGGAGATTGCCAGCCTGCGATTTGTCTTCCTTATCAACCAGGACCTCAT Gene GeneID:514410|MCRS1:NM_001075666:68_cdna Constitutive 0 NULL GeneID:514410 5 GENE MCRS1 MGC139523 microspherule protein 1 EMBV3_12249 TGACGCGGTTGCTCTGGTGGATGCATTTGATTTTCAGGATGTGACACTGGGCTCTGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22855 TAGCTGTGTGTAAGCCTCTGAGATACCCTGTAATCATGAACCACAAGCTCTGTCGGCAGC Gene GeneID:527195|LOC527195:XM_002684937:102_cdna Constitutive 0 NULL GeneID:527195 1 GENE LOC527195 NULL similar to olfactory receptor 1367 EMBV3_21928 CCCCTTTCAACCATAAAGTCCTGTGAGCACCCAAGGTGGCATCAATCAGAACATCGTGAG Gene BVT0102_082891 - 1 EMBV3_20292 GK000030.2:84573312-84590184 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252305 1 XLOC_155246 Coding TCONS_00252305 XLOC_155246 Coding Coding - X:84585985-84587186 - TSS189526 1201 1 TCONS_00252305_2 207 0.572023313905079 1 0 2.83215223724114e-05 0 0 0 0 0 0 0 0 2.05553381602959e-05 0.000226821904582732 2.97725695384762e-06 0 1.17502090272125e-05 0 0.000879655151027299 0.000124413492281599 9.05307169340318e-05 0 0 0 0.00103339477329576 8.40253605514423e-05 0.00093524519664857 0 0 0 0.000287915815428254 5.05266854503331e-05 0.000635766502229123 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1031 93.31 0.572023313905079 TCONS_00252305_2 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-11 62.0 25.38 0.922705314009662 1 coding 0 0 0 0 -0.0447444288129588 0.717882841065059 -0.012243434430511 0.793490271806737 GAAAAGTTTATTAGCATTCCTTGTGAAAAATTTAAAAGTGATATTAGCAGTTAGTCTTCATACAAATTACATATAAAAATCAAGATGTCAGTGTATACTTAAGACTATTAAATCAGAGCAAAACAAAACCATTCACTCAGACTTGTGGATCACACCTCCATTTATTAGAGAACACAAGTTTGCCCAAACCAAACCCAGGCTTACATTTGTGAATTTGACAGGCAAAAGAGGAGCAGGAGGCACTATTAAATTAAAAGCTAATTTAAAAGATTTCAGTAGCTAAATAGAAAGTTCCCAGAGACCCAGATGACAGCCATGTGTCTAGCCCCTTTCAACCATAAAGTCCTGTGAGCACCCAAGGTGGCATCAATCAGAACATCGTGAGACTGGAATACACTTCCATTTGACTGTCTTTGGAAAAACCCAGTAACTTTACACAAGGGCAGTGGGCCCAGTGCCCAGAAGCCAGTTGACTTCCACAGTGGCCACATTACGATAATAGCCCCACTTTCCAAAGTGCAATGCCAAAGAATGCTCAAACTACCGCACAACTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCGTGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCGCTGGATCATCGAAAAAGAAAGAGAGTTCCAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGACTGTATGGATCACAATAAACTGTGGGAAATTCTGAAAGAGATGGGAATATCAGACCACCTGACCTGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATGTAACTTGTATGCAGAGTACCTCATGAGAAACGCTGGACTGGAAGAAGCACAAGGTGGAATCAAGACTGCCTGGAGAAATATAAATAACCTCATTTATGAAGATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTAAAAAGGCTGTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCTGGTCCCATCACTTCATGGGAAATA TCONS_00247415 . 3' 2999 TCONS_00247415 . 3' 4199 EMBV3_20893 GTGCTAAGGACTTGTCACAGCTTAACCCAAAGCAAGCAGCACAAACAGGAAATGGGAAAG Gene GeneID:524854|THUMPD1:NM_001046277:347_cdna Constitutive 0 NULL GeneID:524854 25 GENE THUMPD1 MGC137525 THUMP domain containing 1 EMBV3_42015 GTAGGCAAAATACTCTCTGACATAAATCTCAGCAGGATCCTCTACGGCCCGCCTCCCAAA Gene BVV0102_313862 - 1 EMBV3_06887 GK000030.2:118186828-118258768 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34268 AAAGATATACAAGATTCCCTAACAGTGTCTACTGCCATCAGTGAGAATTACCAGACGATG Variant GeneID:493728|CAPZA2:NM_001012998:30_cdna 719^781 1 EMBV3_12799 GeneID:493728 4 GENE CAPZA2 NULL capping protein (actin filament) muscle Z-line, alpha 2 EMBV3_26402 ATCAACCCCGTCTATGTCGACGCCTTCAAAGTGATGAGCTCATTTTCCTGGACCCTCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16130 CCCTGTGCCGAGTGCTTAACGTGAATTCTCTCTTGTCCTCACAACGGCCCTCTGAGAGAT Gene BVV0102_192224 + 0 NULL GK000015.2:53645295-53663785 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09666 TGCTGTATCACGGCCGCCTCCCTCGCCTTTTCCAGAGGAACCTGCTCTACAGTCAGAAGA Gene GeneID:616625|LOC616625:XM_002686619:141_cdna Constitutive 0 NULL GeneID:616625 3 GENE LOC616625 NULL similar to aquaporin 12B EMBV3_13678 GTCCCTCTAAATTTGGAATTTCTGATCCTGGGAAAGAGAACCAAACAAGATCCCAAGTTC Gene GeneID:540090|RNF2:NM_001101203:96_cdna Constitutive 0 NULL GeneID:540090 16 GENE RNF2 NULL ring finger protein 2 EMBV3_19752 GTGAGGCCCACAGTAATTGAAACTGATGTTTATGTAAACAGCATTGGACCAGTTGATCCC Gene BVV0102_395572 + 0 NULL GK000006.2:66228680-66454412 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205367 TCONS_00205369 TCONS_00205370 1 XLOC_124639 Coding TCONS_00205367 XLOC_124639 Coding Coding GABRG1 6:66203932-66316331 = TSS153376 1317 1 TCONS_00205367_3 404 13 0.988398370077759 0.000892185468153894 0.000452501605763819 0.000378769000707149 0.000257115180913223 0.000357543665318901 7.86185909006508e-09 0.000671471598452645 0.000438535245681797 0.000939739964237805 4.98836377558982e-05 1.41761590938952e-09 2.46888169714373e-09 3.09254646196112e-07 3.35513733190951e-09 1.23781064010337e-07 2.97506022822512e-06 1.03943469325339e-08 5.64683939519439e-08 0.000206857321486557 0.00047497741518648 3.30682394133062e-10 4.50394218484792e-09 9.90919096180955e-07 1.53423978860714e-06 0.000419202188334567 0.000700271560586444 0.000557844256082925 2.45317171212374e-08 3.26486306829846e-09 4.32267761543449e-09 NM_001101250.1 GABRG1 Bos taurus gamma-aminobutyric acid (GABA) A receptor, gamma 1 (GABRG1), mRNA. 0.0 2143 99.92 0.903568716780562 NM_173536.3 GABRG1 Homo sapiens gamma-aminobutyric acid (GABA) A receptor, gamma 1 (GABRG1), mRNA. 0.0 1709 91.58 0.893697798025816 TCONS_00205367_3 sp|Q9R0Y8|GBRG1_MOUSE GBRG1_MOUSE Gamma-aminobutyric acid receptor subunit gamma-1; 0.0 702 95.49 0.930693069306931 2 coding 0 0 0 0 ACCAGTCTGCAGCTGAGGTGGGAGGAAAAGTCCTGGCTGGAGAACTAAGAAAAAGCGATCCCCATGGGTTCTTGGAAAGCTCTTCTCTTCTCCCCTTTTCTTTTGTGGAAGCAAAGGAGAGGGGTGAGGTTGATGTTCCTGTTACTGACCGTGCATCTGGGAAACTGTGTTGATAAAGCAGATGATGAAGATGATGAGGACTTAACAGTGAACAAAACTTGGGTCTTGGCACCAAAGATTCACGAAGGAGATATAACACAAATTCTCAACTCCTTGCTTCAAGGCTATGACAATAAACTTCGCCCAGATATAGGAGTGAGGCCCACAGTAATTGAAACTGATGTTTATGTAAACAGCATTGGACCAGTTGATCCCATAAATATGGAATACACAATAGATATAATTTTTGCCCAAACCTGGTTTGATAGTCGTCTAAAATTCAATAGTACCATGAAAGTGCTCATGCTTAACAGTAATATGGTTGGGAAAATTTGGATTCCTGACACTTTCTTCAGAAACTCAAGAAAATCTGATGCTCATTGGATAACAACTCCTAATCGTCTTCTTCGAATATGGAATGATGGACGAGTTCTATATACTCTAAGACTGACAATTAATGCAGAATGTTATCTTCAGCTTCATAACTTTCCTATGGATGAACATTCATGTCCATTGGAATTTTCAAGTTATGGATATCCTAAAAATGAAATTGAGTATAAGTGGAAAAAGCCTTCTGTAGAAGTGGCTGATCCTAAATACTGGAGATTATATCAGTTTGCATTTGTAGGATTACGGAACACAACTGAAATCTCTCACACAATCTCTGGGGACTATATTATCATGACAATTTTCTTTGACCTGAGTAGACGAATGGGATATTTCACTATTCAGACGTACATTCCATGTATTCTGACAGTTGTACTTTCTTGGGTATCTTTTTGGATCAATAAAGATGCAGTACCTGCAAGAACATCATTAGGTATCACCACAGTGCTGACTATGACAACTCTGAGTACAATTGCCAGGAAGTCCTTACCTAAGGTTTCTTATGTGACTGCGATGGATCTCTTTGTTTCTGTTTGTTTCATTTTTGTTTTTGCAGCTTTGATGGAGTATGGCACCTTGCATTATTTTACCAGCAACAAAAAAGTTAAGACTACTAGAGAAAAAAAGCCAAAACTCAAGACCTCGGTATGGGTTCATATTTTTTTTTTTTTTTTTTTTTTTTGGTGTATGTTATTCGATTCCAGTGTATTTATGAATAAACTATCAAGATGAAAATTAGACTTTAAAAGAACTCCTTCCTTTGTCTACCCA EMBV3_35895 CAAGACTCAGCCCTGTGAAACTGGTAATCTTGGTGCCTAAGCTGGATACCTGCGTATAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12373 GAACTCAGAGACACTCACACACCAGGCAGAGGCCAAGTGGGACAGGACTGTAGGTTGCTA Gene BVT0102_171007 - 1 EMBV3_34151 GK000008.2:86579453-86686387 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16467 AACTTGGACATAGATCAGAAGCTAAAGATGGTGGTATCGGGCCCCTGAGCTACTGTTCGG Variant GeneID:515462|CDK7:NM_001075715:84_cdna 253^619 1 EMBV3_04605 GeneID:515462 20 GENE CDK7 MGC140417 cyclin-dependent kinase 7 EMBV3_20344 GAACCACTCCAACATCCCCTTCAGCAGGGTGAACCACAGCAAGTTCATGGTCACGGAGAA Gene GeneID:789315|PLD4:XM_002696851:697_cdna Constitutive 0 NULL GeneID:789315 21 GENE PLD4 NULL phospholipase D family, member 4 EMBV3_28372 GGGACTATGAGAAAATGGTCGGGCAAACGAGGAGTTGGAGAAGGAGCCGAAGGAGGAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03979 GAAGGTCTCCAGCCTCTTCATTCTCCTCTGTGGACTGCTTGCTTTATCATCTGCGCAAGA Gene GeneID:518904|BASE:XM_002692297:1678_cdna Constitutive 0 NULL GeneID:518904 13 GENE BASE NULL breast cancer and salivary gland expression protein EMBV3_09033 GATTCCTGGGCCTGGGAGTGGGCAATGCTTAGTGGTGAATTTCAAGCTAAAGTAAATACC Gene GeneID:511531|LOC511531:XM_002686268:94_cdna UTR3_Alt 2 NULL GeneID:511531 3 GENE LOC511531 NULL similar to guanylate binding protein 1 EMBV3_10840 CAGTGATACCTGCCCTTATCTAATCCCCTCCCATTGGCTGTGGGCTGCACTTCGTCAAAA Gene BVV0101_003229 + 1 EMBV3_19317 GK000020.2:10062675-10071639 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18757 GCTGCTTCGACTATGCCAGGGCGTGCCCAGTCCCTGCCTTTATAACTACCTCTGCGTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27365 AGGCAGTACCGGCTGATCCCTCACAACGGTTACTGTGATGGCAAGTCAGAAAGAAACATT Gene GeneID:281444|RBP4:NM_001040475:30_cdna Constitutive 0 NULL GeneID:281444 26 GENE RBP4 MGC134222 retinol binding protein 4, plasma EMBV3_41728 ATGAGGGACCTTTACGGGTAGTCCACACTTCTGTTTGACCAGAAGCTGAAGTTAGCCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10986 CTCTGTATGTTTATTTTTAATTCTTCTATGTCTTTGTTAACTGATTCTTGCATTTCCTCC Gene BVV0102_402754 + 0 NULL GK000028.2:25647736-25683638 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182024 TCONS_00182025 1 XLOC_110750 NonCoding TCONS_00182025 XLOC_110750 NonCoding NonCoding - 4:72916020-72935874 - TSS136111 1218 1 TCONS_00182025_1 40 0.998357963875205 2 0.938749811111671 0.00125603526593286 0.000463663352385419 0.000440201809663616 0.000334736346011816 0.000600380579388867 0.000214063036271968 0.000386206878878944 0.000172390234859476 0.00028809626094532 5.11845684952055e-05 1.87904667768374e-06 3.52277248827446e-05 0.000401259629692498 0.00122575584568126 9.72508217046354e-05 0 0 3.42887881247314e-06 0.000247752603844902 0.00026561304734006 6.13945865191942e-05 0 0 0 0.000222158231527253 2.55180793357184e-09 0.000623309386604748 0 0 5.47202008518613e-07 XM_005213678.1 ZAR1L PREDICTED: Bos taurus zygote arrest 1-like (ZAR1L), transcript 8e-54 215 77.36 0.201149425287356 NR_033805.1 WAC-AS1 Homo sapiens WAC antisense RNA 1 (head to head) (WAC-AS1), 2e-22 111 68.34 0.270935960591133 0 noncoding 0 0 0 0 -0.235821869848856 0.143565619160823 -0.00682735949011282 0.904439884537583 AGTTGTGCTCAGCCATTGGTTGGCTCTGCTGTGGGCTCTTCCCCCAAGTGAGCAACTGTCACTGAGCAACAGTTAGTGGCCAATTCAGCAAACGGTCGTCAGAATGGTGGTTGTCAGGTGGAGAATGAGGTAAAAAGTGGATCCTGGCCTTCTCCCTGGTGCCCTCCATCTCACCCGGCCTCGGCCAGCGGTGCCATAACAAACCACTTGTGGAATCTTCATTCCTGTCCAGAAATCAAGCCCTGAGCCTTTGGAGTGGGAACACTGACTCCAAGACCCTAGACTACCAGAGAACTAACCCTAGGGAGTGTCAAATAGTAGGAAATCACACCAAAGGAAACCACTTGAATACAAGACCCAGGATCACCCAATTACCAGTAGCACCCTGTACAGGACACCTCATCTAAACAACAAACAAGACAAAAATAAAAACCCAACCAACAGCAGACAGGATTACCACCTCACTCAGCTTTGCCCATCAGAGGAAAAACAAACAAAAACTCAGCACAAATCTCACCCTATAAGAAGCTCACACAAATCACTGGACCAACCTCAGGAAGATAGAAACCAAAAGGAAGAAAGAATTAAACCATTTTTGAGGAAAGAATTCAACATTCCTTGAAGCCTGGGAAAAGGAGACCTCAAAACACGATAAGTTAAAAAAAAATAATTAAAAGGCAGAGAAATACTGCACAAGTGAGGGAACAAAGTAGAAACACAGAAGTCCAAATAAATGAAGAGGAAATAGGCAAACTCCCTGAAAAATAATTCAGAATAATAATAGTAAAGATGATAAAAAACCTTGAAAACAAAATGGAGAAAATGCAAGAATCAATTAACAAAGACCTAGAAGAATTAAAAATAAACATACAGAGACAAACAGCACAATTACTGAAATTAAAAATACTCTAGAAGGAATCAATAGCAGAATATATTAAGCAGAAGAATGAATCAGTGAGCTGGAAGATAAGATGGTGAAAATAACTTCTGAAGAGCATAATAAAGTAAAATAATGAAAAGAACTGAGGACAGTCTCAGAGACCTCTGGGACAATATCAAACACACCAACATTTGAATTATAGGGGTCCCAGAAGAAGAAGAGAAAAAGAAAGAGTATGAGAAAATGTTTGAAGAGATTATAGTTGAAAATTTCCCCAACATGGAAAAGGAAATAGTCAGTCAAATCCAAGAGGCACAAAAAATCCCATACAGGATAAA TCONS_00184551 r 5' 53984 TCONS_00184551 r 5' 53984 EMBV3_07991 AGCATGAACCAGTCATGAGCCATATCTTAGAGAACTGGGCAGTGGCAGCCGCAACCATGT Gene BVT0102_010979 + 0 NULL GK000030.2:63698388-64404530 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23957 AGCTTCAGTGGCAGCTCCAGCAGGCTCGGCACAGCATTTGTGAGCTCTATGGCCTGGTCT Gene GeneID:510990|PLIN4:XM_002688931:121_cdna Constitutive 0 NULL GeneID:510990 7 GENE PLIN4 NULL perilipin 4 EMBV3_17476 TGTTCCCAACACTCCCTGCCCAGACCGATTTTTAACTGGAAATTGTCGCAACAGTGGGAC Gene GeneID:512922|SPSB4:XM_002685041:109_cdna UTR3_Alt 2 NULL GeneID:512922 1 GENE SPSB4 NULL splA/ryanodine receptor domain and SOCS box containing 4 EMBV3_40280 GCTGCAGAAAGCAAACCTCTGCTCGCGCGTGTTCTTCTGGTGGCTAAACCCCTTGTTTAA Gene GeneID:100294973|LOC100294973:XM_002683605:2_cdna Constitutive 0 NULL GeneID:100294973 1 GENE LOC100294973 NULL similar to CG11897 EMBV3_21709 GGCCCCTCTGTCTTGTTCTTGGCACATGGTCTTATTTTAACTGCAGAGAATCACTCTGGG Gene GeneID:540209|TSHZ3:XM_002694916:1018_cdna Constitutive 0 NULL GeneID:540209 18 GENE TSHZ3 NULL teashirt zinc finger homeobox 3 EMBV3_24811 GTGTGGCTCGTTACTCACAGTATAAAACCAATATAATTTTTTTATCATCTTATATCCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42805 CATGCTGCCACAATTATGAATGCTTTTGTCCCATCACTAATTGTAGCTGTTTGATACCAG Gene BVT0102_003848 + 0 NULL GK000008.2:17393941-17425384 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41742 GGACCACTCTGAGTGCTGAACACTGAGACAAGGGAATATCATCTGGGTTGAATGCAAGAG Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_35037 CCCGCCCTCCAAGTCCAACCTCCGATCTACTCTGGCGCTGAAATGGATTAATAAGGAACT Gene GeneID:100335999|LOC100335999:XM_002692212:1422_cdna Constitutive 0 NULL GeneID:100335999 13 GENE LOC100335999 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_21129 TGTACATGACACCTGGCTCCTCCCACACCCCAGCATTGGATCAAGGTCTTTCTGTGTTCT Gene GeneID:100300085|LOC100300085:XM_002689154:163_cdna Constitutive 0 NULL GeneID:100300085 7 GENE LOC100300085 NULL similar to olfactory receptor Olr1654 EMBV3_12279 ATCCAGCCAGACTTGCTCATCTCCCTGACAGCACCCAAAAAGTCTGCAACCCAGTTTACT Gene GeneID:404132|APOA1BP:NM_205796:46_cdna Constitutive 2 NULL GeneID:404132 3 GENE APOA1BP AIBP apolipoprotein A-I binding protein EMBV3_40173 CTTGTTTTACATCGGAGAATTCACACTGGGGAAAGACCCTATCGGTGTGCTGTATGTGGG Gene GeneID:524256|ZNF300:XM_002689309:180_cdna Constitutive 0 NULL GeneID:524256 7 GENE ZNF300 NULL zinc finger protein 300 EMBV3_33399 CTGACGACGCGACCAGGACCTTGGGGAAAGACATGAAGTTATCAACATTAACCTGAGAAA Variant GeneID:613905|GSTO2:XM_002698471:509_cdna 302^410 1 EMBV3_18898 GeneID:613905 26 GENE GSTO2 NULL glutathione S-transferase omega 2 EMBV3_23098 TCCTCAAAGGAGAGCCTGTTACACCCAAGGCCGACATCTACTCCTTCGCCATCACCCTCT Gene GeneID:444869|MOS:XM_002692654:78_cdna Constitutive 3 NULL GeneID:444869 14 GENE MOS C-MOS v-mos Moloney murine sarcoma viral oncogene homolog EMBV3_03721 GGGACTTTGGGTCTCTGTACCTTTCTTTATATCCTATTCTTTTTGTTCTGGAATGGTGGG Gene BVT0102_198182 + 0 NULL GK000013.2:25816735-25945073 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42263 TAGAGAGGACTCTAAAACTCGACCCCCTAAACCTTGGTCTGCTCCAGTCTTGCCTTGAGA Gene BVT0102_072567 + 0 NULL GK000007.2:39470753-39472616 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212866 TCONS_00212865 TCONS_00212867 TCONS_00212868 1 XLOC_130275 Coding TCONS_00212865 XLOC_130275 Coding Coding EIF4E1B 7:39467800-39472207 j TSS159599 2193 1 TCONS_00212865_3 232 0.136342909256726 7 0.503858374943259 0.040201253382028 0.0217804348317543 0.0294430364441382 0.0530325509490732 0.0349007146519233 0.0133304556625491 0.0280845391790688 0.0311633959713953 0.0596782098226205 0.00831322808683666 0.00170124444424387 0.0017939566723531 0.0132529945229847 0.0159187702749774 0.0121613189592556 2.21855679834164e-14 0 4.61663529232964e-16 0.0322252725896026 0.0261832413059745 0.0244059019571542 1.29419738070985e-17 1.55802331770387e-08 2.37283823089824e-05 0.0392540274438822 0.0302550699731629 0.0316526161382312 0.000684441889638325 0.00062037325492738 0.000455486943566364 XM_866118.2 EIF4E1B PREDICTED: Bos taurus eukaryotic translation initiation factor 4E family member 1B (EIF4E1B), mRNA. 0.0 2257 100.00 0.56999544003648 NM_001099408.1 EIF4E1B Homo sapiens eukaryotic translation initiation factor 4E family member 1B (EIF4E1B), mRNA. 0.0 747 89.10 0.259005927952576 TCONS_00212865_3 sp|A6NMX2|I4E1B_HUMAN I4E1B_HUMAN Eukaryotic translation initiation factor 4E type 1B; 1e-121 350 88.36 0.810344827586207 1 coding 0 0 0 0 -0.0296794979847421 0.909133568022972 -0.108684444818259 0.0917155298565974 GATGGTGGGTTTAAGGCTGGCAGCTGGAGGCCCCCTCGGATGGCTGGGTGCCCGTGGAGCCCAGGCTACAGCATGGCTGCCGCCCACCCTTGGAAGAAAGAGGATGAGAAAGAGGAGGAGGAGGCAGGCGCGGGGCCGTGCATGGGAGAGGAGGCTCTGAGGAAGACCCCGGAGGAGGGCAAGCCGGACTTACACCCGCTGCTCAACAGGTGGGCTCTGTGGTTCTTCAAGAATGACCGCAGCCGAGCCTGGCAGAACAACCTGCATCGGGTCACCAAGTTCAACACCGTGGAGGACTTCTGGGCGATATATAATAATATCCAGCTGGCCAGTAAGCTCTCTTCCGGCTGTGACTACGCCCTGTTCAAGGATGGCATTAAGCCCATGTGGGAAGACAGCAGGAATAAGCGGGGTGGCCGCTGGCTGGTCAGCCTCACAAAGCAGCAGCGCCACATTGAGCTGGACCACCTGTGGCTGGAGACACTGCTGTGTCTCATCGGGGAGAGCTTTGGGGAGCACAGCCAGGAAGTATGTGGGGCCGTCATCAACATCCGAGCCAAGGGGGACAAGATTGCTGTGTGGACACGGGAGGCAGAGAACCAGGAAGGCGTGCTACACATTGGGCGTGTCTACAAAGAGCGCCTGGGCCTCTCCACAAAGACCATCATTGGGTACCAGGCCCACGCAGACACAGCCACCAAGAGCAACTCCTTAGCCAAGAACAAATTTGTGGTGTGAGAGGACCCTGAGCCTCCCATTGCTGTGTGTATTTATTTCTCAAGGGGGCTGGGCTGGGCTGAGGGCAGGTGGCATGTTTCTCCCCTATCCTGGGGCTCAGGCCTAGGGGTGAGTAACCAACTTGAGGGCCCAGGGCAGTGGAAAGGTGGAGAAAACCTGGGCTTTTTAACCCTGGGGGGCTGGGTTGGGTACAGTGTGGTGAGGTGAGTCATTGGTAGAGGAGGTGGGATGGCAAGTGAAAAGAGAACAGGAGAGAATCCTAGGATTCAGGACTAACTCCACGCCCCCCACCTTGGGGAAAGAAGTTAGGTGTTCTGAAGGCCAGTCTCTTCCATTTGGGGGGGTGGGTTCAAGGCTGCTGACAGAGCTGGAGCTCAGGGACAGGAGTGGGGGCTCTGAGTGATCACTCTGCTTTAAAAACTTTTATGGGTTGCCTCTCACTAGATTTGTAGCCGTGGAGCCTATGTTTATCAGTCAGCTGTGTGTGGGTCCCTAGAGTAGAGGGGTGGGGTTGATGAGGGCCTGGCCCAGGAGAGGTGATCAGGCCTTACTGTGGCTCTGCCAGAGGTGGATTAACCAGAAGGTGAAGCTTAAGCCCTTTTCTCTTCCTGTTCTAAACAAATACTTTAAACAAGATTTTTTTAAAATTCAGTTTTTGTTTAAAGTAATTTATTTTGGCTGTGCTGGATCTTTGTTGCTGTGTGGGTTTTTCTCTGAGAGTAGAGGGGGCTACTCTCTGGTTGCAGGGTACAGGCTTCTCACTGTGGTGGCTTCCTTGTGGAGTATGGGCTCCAGGCGCGCCAGCCTCAGCAGTTGCAGCTCTGGGGCTCTAGAGCACAGGCTCAATAGTTGTGGTGCGCAAACTTAGTTGCTCCGTGGCATGTAGGATCTTCCCAGATCAGGGATCGAACCTGGGTCTCCTGAATTGGCAGGAGGATTCTTTATCACTGAGCCAGCAAGGAAGCCCAAAATTGGAATTATTTTTAAAGAGGACTCTAAAACTCGACCCCCTAAACCTTGGTCTGCTCCAGTCTTGCCTTGAGAGGGCTCATGTGAGACCCCTTCGGTAACAAGGAGCCTGATCAAGGCAGACGCTGGTATGGGGAAGAGAGGTTAGACGGTGCGGGGCGGTGTTTCAACCACCAAAGGGGTTTGAACTGGGGGCTGCGATATATGGCCTCCCGGCAAAACTGAAGGGGCAGGGAGCAGCAGGCGCAGCCCTCACAAGACCCAGGTGTCATCCAGTCAGAGTTTGAACCAGTAGAGACAGAACTGAATTTCCGAGTGAGAAGCACTTCTGATTCGACTCCCCTGTAATAAAACGTCCTGCACGTGTATATGCACCATCCATATAACTATTCTCTGTTCGCTCACCAACACGGTCGTTACTCCTCTTCAGGGATGGGCACCGACTGCAAGGCCGGGGGTTGGGGTGGCGCTGGTACTGATCCTTGT EMBV3_33036 CTGGTAATGGCTGCAGAAATGGAACAGACATCTGGCACGGGTCCAGCAGAATTAACTCAG Gene GeneID:508293|MOSPD2:NM_001101896:11_cdna UTR3_Alt 2 NULL GeneID:508293 X GENE MOSPD2 MGC159831 motile sperm domain containing 2 EMBV3_02634 TTCTCAGTCAGCCTCACTTCATTTCTTTCAACTCCTACCTTTCCCTTGCTGAGGAGGTAG Gene BVV0102_173383 + 0 NULL GK000016.2:57682388-57694738 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067724 TCONS_00067726 TCONS_00067729 TCONS_00067730 TCONS_00067733 1 XLOC_041532 Coding TCONS_00067724 XLOC_041532 Coding Coding RABGAP1L 16:57070333-57687227 j TSS50859 7100 1 TCONS_00067724_5 492 0.0392957746478873 17 0.988518268159956 0.00316970694839409 0.00258005195358073 0.00231285867298379 0.00231455564153225 0.00297896838585746 0.00112977053572948 0.00187143407789529 0.00239518365162301 0.00554368229952369 0.000300596037182759 7.81951930589451e-05 0.000141603459105539 0.000307327746123883 0.00172845880479144 0.000792686920718901 0.00231642941389709 9.58401502641874e-08 7.64380682850188e-05 0.00317716364077464 0.00396973310618242 0.000864489946577885 0.000227228210902467 0.000241200552958832 0.00071857100903359 0.00319325739898909 0.00238217565924462 0.00189816004513376 1.28421149906581e-05 7.7231219240868e-05 8.20764290673273e-05 XM_003587088.2 RABGAP1L PREDICTED: Bos taurus RAB GTPase activating protein 1-like (RABGAP1L), transcript variant X1, mRNA. 0.0 1.117e+04 100.00 0.872253521126761 XM_005245680.1 RABGAP1L PREDICTED: Homo sapiens RAB GTPase activating protein 1-like (RABGAP1L), transcript variant X1, mRNA. 0.0 4525 85.17 0.55830985915493 TCONS_00067724_5 sp|A2AWA9|RBGP1_MOUSE RBGP1_MOUSE Rab GTPase-activating protein 1; 0.0 745 74.00 0.967479674796748 1 coding 0 0 0 0 0.0534773952588039 0.851697463490309 -0.102523154009486 0.118969343363702 CTCCGTGAAAGTTTTTCTTCTGAGGGAAAAGGCCATACCAATGCTGGGGATGCAATATATGAGGTGGTGAGTCTACAGCGAGAGTCTGAGAAGGAGGATCCAGTCACTCCTACTAGTGGAGGGGGCCCATTGTCACCCCAGGAGGATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCCTGAGAAGATCCTATATTCTTGGGGAGAATTGCTAGGAAGATGGCACAGTAACCTTGGTGCACGACCAAAGGGATTGTCCACTCTGGTGAAGAGTGGTGTTCCTGAAGCATTGAGAGCAGAGGTATGGCAATTATTAGCAGGCTGCCATGACAACCAAGCGATGCTGGATAGGTACCGACTTCTTATCACAAAGGACTCAGCCCAGGAGAGTGTTATTACTCGAGATATTCATCGTACATTTCCTGCACACGATTACTTCAAAGATACTGGAGGAGATGGCCAAGAATCTCTCTACAAGATCTGCAAGGCCTACTCTGTCTATGACGAAGACATTGGGTACTGTCAAGGACAGTCTTTTCTTGCTGCTGTATTGCTGCTGCATATGCCAGAAGAACAAGCATTCTGTGTTTTGGTGAAAATCATGTATGACTATGGTTTACGAGACCTCTACAAAAACAACTTTGAAGATCTTCACTGCAAATTCTATCAGTTGGAGAGACTCATGCAGGAGCAGTTACCGGACCTGCACAACCATTTTTCTGATCTGAACCTAGAAGCTCATATGTACGCATCCCAGTGGTTTCTCACTCTTTTCACTGCCAAGTTCCCACTCTGCATGGTCTTCCACATCATTGACTTACTGCTTTCTGAGGGTTTGAACATAATCTTTCATGTAGCCTTGGCTCTCCTAAAGACCTCAAAGGAAGATCTTCTGCAGGCTGATTTTGAAGGTGCCTTAAAGTTCTTCAGAGTCCAACTTCCAAAGAGATACAGGGCAGAGGAAAATGCAAGAAGGCTAATGGAGCAGGCTTGCAACATTAAGGTACCAACCAAGAAGCTAAAGAAATATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAGCAGGAAGACCCAATGGATAGATACAAGAGGGAGAACCGGAGACTACAGGAGGCCAGCATGAGGTTGGAACAAGAGAATGATGACCTTGCTCATGAACTAGTAACCAGCAAGATTGCTCTGCGGAATGACTTGGATCAAGCAGAAGACAAGGCAGACGTGCTGAATAAGGAGCTTCTCTTGACCAAACAGAGGCTGGTGGAGACCGAAGAAGAGAAGAGGAAGCAGGAGGAAGAGACGGCTCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGAAGGCGGAATATGAAATCAAGAAGACTACAGCTATCATTGCCGAGTATAAACAGATCTGTTCCCAGTTGAGTACCCGACTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAGCTGGAAGTGGTAAAGGGTAAAATGATGGCATGTAAACACTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAAGCAGCGGCCGTAAGCAGAGAGGACCAGGGCATTGAATCGGATGATGAGAAGGACTCTCTTAAGAAGCAACTGAGGGAGATGGAGCTGGAATTGGCACAAACCAAACTGCAGCTGGTGGAGGCCAAGTGTAAAATCCAGGAACTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCAAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTATCAAAACGGCCACGGGCACGCAGCCGCTGCAGCCGCCACAGGCCACCCAGCCCCCCAAGGAGAGCACATAGTTCCAGCCTCACCCGAACACAGGAGCACAACGATCAAAGCGACGGAAACCCAGGAAGAGTCCTGGTGTCCCTTTGAAAGGAAGGGAGGGAGGCCAGAAAGCAAGCCAGGATCTTTCAGTAGCTCTCAATCTTTCTCGTATGACACTTTTCAAAGGGATGTTATTTAAACTAACCTGATTTATGTTGAATACCTGTGTTCGTGCTTCATAGAAGTCCGTGTTCCGATCCATCATAGTATTATTACACATTATTTTATATGCCTGATATCTGGTTGGAAACAAGTAATTCAGAGCTAAATGCTTTTTATTTAGAATTATTCATAATTATTTTTATCTTACATGAAAATGGAGATGTCTTTTATTCCAAGGTTGAATTGATAGGAAGATATTTGTCACAGCAAAAAAAAAAAGATTGAAACCTAAACCTCATAACTTTCCAGGACTTCTTCAGATAAAGCACACTGTGGGGCCAGCCACGACCACTGTCAGGTTTCCTCCTGAAAGTGATTCCCTGGACAGCGATAATCCTATCTGAAGGAAAGAGCAGATCTGGGGTTGGACAGTTCCCAAAGAGAAATAGTTTATTTTTATTTTCTGTGGGGTACATCTGGAAATTAAGTGCCAAGAACCATGGAATAAGATAGGCTATTGAGAACACACACTAGATAAAAAAGAACTGAGTTTTTATAAATGCAGGATAAAATAAATCACTTTGGTCCTGGTCTTCTAACAGGTCCTTTTCAGAATCCCACAGGAGAATCGCGAGTTCCTAAACAAGCATACAGTTGTGCCTTCTGGCAAATGTGAAGTCGTAAGTGGATATTACGAGTTTCATCTTTAGGAGACCTTTACCAGAGAAGCCTGAAAGGCCCAGGAACAGTTACTGTGCTTAGAATGGAATGTAGAACCAGGGACAGAGTATTCGTTTAATGTTGACATATACTTTGCGAAGGAAACACTAATATACTGTAACTTTGTTAAAGTTATGAAATGGGAAATAGAGGTCAGCTTCATATCACCTTAATTTAATACTAGGCCCCTTTTTCTGAGTTCTGTAGCTTCCTAAAAATGTGCCCTTGGTACCCCTAGATGAAGAGATGCAAATGCATTTGTAACATTTTTGACTGCATATAAAACCTTTATAGAAATACTTATCTCATGGAAAGGCAAAGCTATTGTGTAAAAGTTGATGGAAATATTTTTTTTCAATTATATTTAACATGTCTTTATAAATAGTCTTTGCAGGAAATCCTTTGGTAAGGGAAAAACCAATTTTCCCATTTTTTAAGCTGTTTTGGAGGCCTTCGGTCCTTTTACGTCAACCAAACTACTGTCGTCTATGTACAGTAACATTTATTGATGCTCATCCTTGGCTTCACTGTCGAACATATTCTTTGCAGAGGATCTTAAACCCTGTAGTGGCAGAGTGACTCTCATCTGCGCCATATGTTTCAGTTAAAAGTGACACACTCTTGGAAGTAAAAATCATGTAAGAGCCATCTCAAGTCCAGGAGCATGCACTACAGGTTGCTCACGGTGGATCCTCTCCTCTAAAATAATCATTAAGCTCTAAAAAGTGAAGTTCCCCTCATCGGTAAGTGTTCTTCTGTCATCTATAGCCTATAAAATTGATGTGGTTGTTTGCTGTCCTTCATTACACTCATCAAATAATACTTTCCCTACAGAATTCCCTTTTTTTTTTTGTCCTGACATCTTTCATCATAGTTTTCCTTTCACCCCAAAGGAAAATAACTCAGCATTCTGAGTATCTGTGTTGACTTTAACATTCCATTTATGGTGGTTTAGAAAAGTTAATATTTTTTTGTAAAATATAATGGCTAGAAAATTGCATCTTGGTACTTGTTTTTGTAAATCATTTAGTAAAATTTGTTAGCTTTCCTGGTACTTTATGCTTTGATCCCAAGAAGCCTTGTACAAGTTGCCTTATCAGATGGCTAGCTAAATTAAGGATGTTCTTTTGTGTTTTGTGAATCTCATAATTCTGCTGTACAGAGCTCTTTTTACATTTCACTGAATGCCTAAATTGCATAATTTTCCTTAAATGGTAGTTGAGAGAGAACTAGCTCCAGGCTCACTTCTTACCTGCAGACCTGGCTCAGCTTTATACTCCCTAACATTTGTTTCTTTAAACAAAATCACCAGGTACAAACATTGTAAACATTTAATCGGTTGCATTTTAACAGATTATAATGGCCATCTATAGATTTTTTTTCCTCCTCCAGTTCCACATCATACTTGGGTGTGTGTATTAGTATCATAGTCTAAACTGTCTCTCACTACAATGCCTTTGGGTGAGTAGCAATAGCAAATACAGAAAGAAAGAAAATGCAAAAGTTGGTATATATTATTCATACAATGTTACAATAGCACTATCCCAGACCACATGCCTTTCACCATATATTGTTTAAAAACTCATGCATTCCAGCATTAAGTATCTGCTAGTTTTAATTTCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGAAGGATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCTGAGGGTTGGACACGACTGCACGACTGAGCGACTTCACTTTCACTTTTCACTCTCACGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTGCTTGCCTGGAGAATCCTAGGGATGGGGGAGCCTGGTGGGCTGCCGTCTCTGGGGTCGCACAGAGTCAGACACGACTGACATGACTTAGCAGTAGTAGCAGTTTTAATTTATCTTAACTTGAAGTATATTTGAGAATTCATACTCTTCTTTTGGTTTTAGAAAGAGGTTGACCAGCTCAAATATCCAGGAGAACTTCAAATATTTTAGTGTTTTTCATCTTTTCCTTGGATACATTGTATAAAACATTCCTCCAAAAATCCAACATTTGCAGCATTCTGAAAAGTGAAGAGTTCTCCTTTCATTAAATTCTTCAATATCAGAGAATGAAGTTCAATTTGATAATTCACTCATTAGCTTTTATATCTTGAGAATCTTTAACACATTCCTTAGAGCTGAAAGAAACCAAGTTGAATTTTGCAGTGCATATGTTTTCTAGCTTCCCACATCCTGAGCCATGGCACAATTTGGTTATATTTAGTTACATATAATTTAATGCAAAGAAATTCTCCATTACTGTGTATGAGTGCCTATCAGAAACACTAATAGGAATGTCACGTAGGCCTATGGCCTATCCTTCCATGCAACCAATAATTCTCTTTCCCTCTCCCAACTATTAAGTTCGTGGTTTGTTTTTCATTGGCTTTCTTAAATTTCCATAATAAAGTAGAAAAGTAATCTTTGTACTGATTTTGGGATATTTAATAGTATTTATCTGGTTTCATTGTTTTCAAAACTTTCATCCTCTTATACTATGTATTAATGTTTATGTTTCTCAAACCCTTACTCCATTTTCCTAAAATACTTTCCAGTTGATAACGAGTGGCTTCATTTCCTAGCTGAAGTGAGAGAAACAAGAGAATACACAATGTAGGGCACAAGAGATGAAAGGTCCTTAAAGAAACGGATTCATTTCTGAGGATAAGAATCACATATGTAACTAACGTAAGGGATTGAGTTTTCTTTTTCTTTAGTTGAGATCAGTCTACTAATTATTCTGGTAAGGTGGTTGTCCAATTTCATGATCGTATTAGGGAAAAAGACGCTTTTAAAAAGTGAAATGTTTTATCTTTCTGGCACAGAACACTTTTAATACTGAGTAAGATGATTCTGTTGTATAACTTACTCTTAAAAAAAAAATTCTTCTTCTCTTGTTCAAGTATAGGTAAACGAGAGCATGAACTATTGTTTGATTTGAATGCTGTGAGATTTGTGTGTGTGTGTGATTAGTGATTGGTATAACTTTATATGGCTTATCCCTGCCTCTTTGGTATACCCTGGTACCATCCAACTGAATATGCACACGGTGATCAGATACAGAAGGCCAGACCCAGCTCAGTGGCCTGTGTTTCCTACCACCAGATACAAAACTCTTGCCCTCTAGTTGCCATGCTGATGGTCACACTGAACTGGAACTGCTCCAGAACATCTTCCTGTCTCGTCGTGGCTTTCATGTAACACAGGCAGAGCCCTTAGGGATTTTCTTATCTTTCAAGAGCTACCAACATGAAAACTTGCATGTGGGCTGCACCTCGATAGGAGATGATCATCTTGAGTTGTAAGGAGAAAAGTGGATATTCGTGAGTAGCTTAGCAACTATAGGCAGCTGTCAGACATTCCTGTCTTAGCTTCCATCGAAAAGACTACATGTCGAGCTTATCTACAAGTGTGTTTGCTCCCTGCTATAAAAACATCTTCATCAACGTGTCCCACTCTCCCTGCCTCCACCCCTGGTTTTTTGTTAGTGGTATTCTGGAAACTTTAAAAAAAAAGAATCATTGAGTAGAAAGTGAACATTTTAAGTTACTTTCCTTTTTCATTGGCAATAAATTAACATGTAAAATCTCTTCTGTTGAAATGTAACTTTTAATAACTATATATTATATATGGAATAAAATATAGGGAACTGAATGATAAGGACATAAATTCATCAAGACTCTGGTGTCATGAAAGCACAAGAATAAAGTCTGGAATTGGTCCCAGAATCCAAGATCGTAATAGCCTTTGCATCAGTTTCTCTATTTTTGGTATTCTGCATAATGTATGGATCCTTAGTTCAAATAAGAAAGAAAGTTTCTCAGTCAGCCTCACTTCATTTCTTTCAACTCCTACCTTTCCCTTGCTGAGGAGGTAGTAGAAATTCTATGCTATCTGTTTTTACAAATTCTATGATTTTGCCCATGGCTTCTCCAATGTAAACAGGTTCCAGAATAAAAGAGTTGATTAGCTCAAACAGTGCTAATTGACTACGAAAGAAATTGGTGAGCAGCCTCTCTCCTCTATCAACACTGACCAATTAGATGTTTCCATTATTCCATGTATTATGTATAGTACACTCTATAAATGTAAATGTAATGCTTGTTAAGAAAAGTGCAATTTATTGTACATTGTCCCAACAAATGTTTACTTTTATAATTGTTATGAACTTGAATTGGATTAATATCTTGTTTTCATGTGTGAATGAAGCCTTGTGAAATAAACAAATGCAACCGAGAAGGTAGCAAGGTGACTGTTTTTGTGAGCCAGTGATGTTCTCAATGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTAAAATCAAT EMBV3_04357 AAGGTGTGTCTGTCCTGCACGGAAATCGACGTGTCTACCATGACGAGAAGCAGCCAACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06300 TCAGAGCACTTCCTGATCTGTGATAGTAGAGGCTGATGATTATTTTGTGGAGAGTGCAGT Gene BVV0101_017717 + 0 NULL GK000010.2:84995543-85014026 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015100 TCONS_00015103 TCONS_00015097 TCONS_00015101 TCONS_00015096 TCONS_00015102 1 XLOC_008416 Coding TCONS_00015101 XLOC_008416 Coding Coding RBM25 10:84945748-85001549 j TSS10729 10383 2 TCONS_00015101_5 355 0.119425984782818 20 0.814283154121864 3.00406325634297e-06 1.96895792554983e-28 3.09291657201113e-05 3.61134338065517e-22 3.13325368375533e-06 2.06556865284338e-96 4.60678386305729e-06 1.37887352908284e-05 1.269828694733e-08 0.000120974304470276 4.31836506468127e-05 1.25799458351076e-09 6.09473481451974e-05 5.55666138626962e-13 2.86050227423654e-05 0.000439887181247849 9.4981634764197e-05 0.000569287665296791 2.75866774241435e-11 6.3391841221733e-06 2.54502927885318e-33 2.38626410133997e-16 0.000435528650804087 0.000117406728559812 1.50210612247652e-15 1.89106920116737e-13 3.33831646545128e-09 0.000230252049420719 5.20821248394381e-05 6.85368344884909e-09 XM_002690998.3 RBM25 PREDICTED: Bos taurus RNA binding motif protein 25 (RBM25), 0.0 1.843e+04 99.34 0.999036887219493 XM_005267955.1 RBM25 PREDICTED: Homo sapiens RNA binding motif protein 25 (RBM25), 0.0 5144 84.91 0.445054415872099 TCONS_00015101_1 sp|P49756|RBM25_HUMAN RBM25_HUMAN RNA-binding protein 25; 0.0 607 99.66 0.982993197278912 1 coding 0 0 0 1 -0.046053641554587 0.730144953811281 0.0137844073716029 0.910935766064856 TGCACGCCGGGCACTAGGAAGACCTCCAGAAGAAGCTCCCCGCGCAGCGCGGCAGTGTTTTGCGGCCTGTGCGAGTAGGCGCTTTGGAATCAGTCTCCCGGATAGCGGCGCGCAGAAACCTCGAACCGGTGGAGCCCACTTGTAACCTGGAGCCCGGAAGACCGCGAAGACAGTACCGTTTCCTCAGCGGCGGACCGCTGCAGTAAGAATGTCTTTCCCCCCTCATTTGAATCGCCCTCCGATGGGAATCCCAGCACTCCCACCAGGGATCCCACCCCCACAGTTCCCTGGCTTTCCACCACCCGTGCCTCCAGGGACCCCAATGATTCCTGTACCGATGAGCATTATGGCTCCTGCTCCAACTGTCTTAGTACCCACAGTGTCCATGGTTGGAAAGCATTTGGGAGCAAGAAAGGATCATCCAGGCTTGAAGGCTAAAGAGAATGATGAAAACTGTGGCCCCACCACTACAGTTTTTGTTGGCAACATTTCTGAGAAAGCCTCAGACATGCTTATAAGACAGCTCCTTGCTAAATGTGGCTTGGTTTTGAGCTGGAAGAGAGTGCAAGGTGCATCTGGAAAACTTCAAGCCTTTGGATTCTGTGAGTATAAGGAACCGGAATCTACGCTCCGTGCACTCAGGTTATTGCATGACCTCCAGATTGGAGAGAAGAAGCTACTTGTTAAAGTTGACGCAAAGACAAAGGCACAGCTAGATGAATGGAAAGCAAAGAAGAAAGCTTCTAATGGGAATGCCAGGCCAGAAACTGTCACTAATGATGACGAAGAAGCCTTAGATGAAGAAACAAAGAGAAGAGATCAGATGATCAAAGGGGCCATTGAAGTTTTAATACGGGAATACTCCAGTGAGCTCAATGCCCCCTCACAAGAATCTGACTCTCACCCCAGGAAGAAGAAGAAGGAAAAGAAGGAGGACATCTTCCGCCGATTTCCCGTGGCCCCACTGATCCCTTATCCACTCATCACTAAGGAGGATATAAATGCTATAGAAATGGAAGAAGACAAGAGAGACCTGATATCGCGAGAGATCAGCAAATTCAGAGACACACACAAGAGATCATATGGTGACTAATGCAAGATGAAACTCTCAGCTTGGAAAGTAACAAGGAATAGGATAAACTGGAAGAAGAGAAAGGCAAAAAGGAAAAAGAAAGACAGGAAATTGAGAAAGAACGGAGAGAAAGAGAGAGGGAGCGTGAAAGGGAACGAGAAAGGCGAGAACGGGAACGAGAAAGGGAAAGAGAACGTGAACGAGAAAAGGAGAAGGAACGGGAGCGGGAACGAGAACGGGATAGGGATCGTGACCGGACGAAAGAGAGAGATCGAGACCGGGATCGAGAGCGAGATCGGGACCGCGATCGAGAACGGAGCTCAGATCGGAACAAGGATCGGAGTCGATCAAGAGAAAAGAGCAGAGATCGTGAAAGGGAACGGGAGAGGGAAAGAGAAAGAGAGAGAGAACGGGAACGAGAGCGGGAACGTGAACGAGAGAGAGAGCGAGAAAGGGAACGGGAGCGCGAGCGAGAGAAAGACAAGAAGCGAGATCGAGAAGAAGATGAAGAAGATGCGTATGAACGAAGAAAACTTGAAAGAAAGCTCCGAGAGAAAGAGGCTGCCTATCAAGAGCGCCTTAAGAATTGGGAAATTAGAGAACGAAAGAAAACCCGAGAGTATGAAAAAGAGGCTGAAAGAGAAGAAGAAAGAAGAAGAGAAATGGCAAAAGAAGCTAAACGACTGAAAGAATTCTTAGAAGACTATGATGATGATAGAGATGATCCCAAATATTACAGAGGAAGTGCTCTTCAGAAAAGATTGCGTGATAGGGAAAAGGAAATGGAAGCAGATGAACGGGATAGGAAGAGAGAGAAGGAAGAGCTGGAGGAAATCAGGCAGCGTCTTCTAGCAGAAGGGCACCCAGATCCAGACGCAGAGCTCCAGCGGATGGAACAAGAAGCTGAGAGGCGCAGACAACCACAGATAAAGCAAGAACCGGAATCCGAGGAAGAGGAAGAAGAAAAGCAAGAAAAAGAAGAAAAACGTGAGGAACCCATGGAAGAGGAAGAGGAGCCAGAGCAAAAACCTTGTCTCAAACCAACTCTGAGGCCCATCAGTTCTGCCCCATCTGTCTCCTCTGCCAGTGGCAATGCAACTCCCAACACTCCTGGGGATGAGTCTCCCTGTGGTATTATTATTCCTCATGAAAATTCACCAGATCAACAACAACCCGAAGAGCATAGGCCAAAAATAGGACTAAGTCTTAAACTGGGTGCTTCCAATAGTCCTGGTCAACCTAATTCTGTGAAAAGAAAGAAGCTCCCAGTAGATAGTGTCTTTAACAAATTTGAGGATGAAGACAGTGATGATGTACCCCGGAAAAGGAAACTGGTTCCCTTGGATTATGGTGAAGATGATAAGAATGCTGCCAAAGGCACTGTAAACACTGAAGAAAAGCGCAAACATATTAAAAGTCTCATTGAAAAAATCCCTACAGCCAAACCTGAACTGTTTGCTTATCCCCTGGATTGGTCTATTGTGGATTCCATATTGATGGAACGACGAATTAGACCATGGATTAATAAAAAAATCATAGAATACATAGGTGAAGAAGAAGCTACGTTAGTTGATTTTGTTTGTTCTAAGGTTATGGCTCATAGTTCACCTCAGAGCATTTTAGATGATGTTGCCATGGTACTTGATGAAGAAGCAGAAGTTTTTATAGTCAAGATGTGGAGATTATTGATATATGAAACAGAAGCCAAGAAAATTGGTCTTGTGAAGTAAAACTCTTTTACATTAAGAGTTCCATTTCAGATTTCTTCTTTCCCATCCTTCAAAGGACTTCATTTTTTTTTTTTGTCTTCAAAGACATTTGTGAGATCTGTAATTTTTTTTTAATGTAGAAAATGTGAATTTTTTTGTCCTCTAATTTGTTGATGCTGTGTGTACTCCCTTGGTTGTAAAGACATCTGAATCCTACCATGGTTCTCTTTATACTCACCAGGTACAAATTACTGGTATGTTTTATAAGCCGCAGCTACTGTACACACCCTATCTGATATAATCTTGTTCTGCTGATTTGTTTCTTGTAAATATTAAAATGACTCCCCAATTCTTATGCAGAATTGCACTTAATATTGAACTGTACAGGCACCAACATGAATGATTTTAAATTTAAAAAATAACCAGTCATACCTATTACCCTTACCTCCTTGATCAAAAATGGCAGGCCTTCATGATGGCATGAGATTTAGAGTGTGGAAATTAGCAGACAATCCATTCCTACTGTATCTCTGTATGAATGTGTTTGTGTGAGTGTATGTATAAAAGTCTTATTTTTTCCTAGTTTGCTTTGGAAATTTCCCTTAAACATTTCCTAATTCAAGAATAGAATTGTAAAGGAAACCTGGCATTGTGCCAATCCAGATGTCTGGGATAATTAGGTTATTACTCTCCCAGAGCATGGTATTCTCTTGTGGCAAGTAACAGTCTATTGAATGAAATGGGTTTTTCTGTTGATAGCTGGCTGTGTCAGCCTCTCCTTAAGGGAGTGTGAATCATAGTGGTTTCCCCCCCTCCGATTTCGTTGTTCAGAAATGAGGCAGATCCTTAGAATCTGGAGAGCTTTATTTTATGCATTTTTTTGCACTTCATTGATCCTTAGTTTAATTTTAATGTACCCCTTTGTTTTAAAAAAGAAAGCTTCATTCAGAAACCATAAATGAAAAAAAAATCTTAAAATTATCAAAAGATAAAATTAGGCAATTTTACAGGCTGGAAAACATTTGACAAAATACTGTAGCAATTTAGCATGGCAATTTACAAAGTTTACATCTGATTTCTGAGGATAAAGTAAGTCGTTTAAAGCAGTTACCACTCATGTGTGTCTGTCAGGGGTTTATATCTTGTGTGTGTATATGCAGGCACACACCTTGTTTACTTCTCTGCTCATCAACGTTCAAAACTGTACTGATCGTGTCCTTAGAGATATACATGAGGCTTTCTTTATTATAGATCAGGACTTCACCAGGGAGCAAAATTACCCAAAAATGTACCAAGTTTTAAACAGTTCTTAACAGAAATTAGGTGCAGCTATTCCCATGTCTGAGTATTTATTTTTTAAGAAGACTGAGGGGGTGTGTTAAAAAACAAAACATAAAAAGCATAACTGAACTTGAATTACAAGATTTTTTTTTTTACATCTGAAGAGGACATTTGAAAACACTGTTCTTAACATTGAACCATGATGTGCATGGTTCCATTATGTAAATATATCAAATATTAAAAATGTATATATTTGATCTTGGGGACTCATTCTTTCAGAGTCTTGTTAAATAAATGGCATCATGTTGTAATTATGCGGTGCATACTAGAAACTTAACTTGAAAATATGGGCTGAATTTTTGATGGACTGGATTTTTAAGTATTAGTACCTGAAGATGAGAAGAGGCCATTTCCCTTATTTTGGATTAATCTAGACATCTATGGAGATATAGCCCCTTTCAGTGTTATAATATTTTAAGTTGTAGTTTCTGAAGGGAAAGTTGTAGAAACATGTTCCTTGCCATTTACAAATTAATTTGCCAGTCTTTTCTCAGATTAATCCCCCAGTGTAACTCCTTGTTCGAGCAGTTTATTATGCCTCTCTATCTTCTCTTACATATTATTGCTTCTGAGACATCATATTAGGTTGGTTTTATTTAGCCAGCATTAGCATGGAAGTTTATTCAGGTAGATTTAATTTTCCCCGCTTTGGTCTCTTCTGCTCTTTCAATCATATTTACCTTAAAAGGGCCCTCATGTGAAGCTCTTGAGGGCACATACCATATACTGCATAATACCTCCAGTGAGATGGGTGTCAGGATCCCAGATTTATATATTAACATTTCTGCAGCAAATGATCTGATCTGACTGATCATTGAGTTAAAGACTGCTACATTAATTGTTTAATGTCAGTTCAAGTCAGATTTTGCCACAAAGCTTAAACTTCAGGATCTTCAGAATTTTTCAGGTTTGTATGTAAAGAACCGACCATGTATAAGCATGAGAATAAGCTGGCACATTCTAGTGTCAGTAATATTACACTTAAGAAATGTTTACTAAATCGCTTGAACTTTCTGGGTTGTCTTTACCATTTGTCCATAGATTAATTTCAAATTGGAACCCTTAGTTAATCTATATATTGCCCCTTCAAGTTGTTATAAAATTACATGCAAGTCTTGACAGCCATTCTGATGTGGCAGCTAGGAAACAAATATGCTTTTTCTGCATTTGACCCTGTAAATAAAATAATTTTAAATGTGTCCATCTGTCAACAGGAAGAAAGTGGTTTTCCCAAACTTTAACATGCGCCTGAATCACCAGGGGGATCTTGTTAAAATGCAGACTTAGCAGGGGCTAGGGTGGCCCTGAGACTTTGCCTTTCTGACCAGCTCCCACATGGTGCCAGTGCTAAGTGATATAAGGACTACTTGATTGGCAGTTCAGTGTCAGTACTGGTATTTTGTCCTAACAGACTGCATAAATGCAGCTTAATTTTTTTTTCTTTTTTTATTTTCTTTTTAAGTATATCTTAAAAAACACTTTTTGAGGCAAATGATAAATGATAGGTATCATTTATATTAAGAACATAAAAGTAATCTTCCAAAAGGATGCCCAAGAATAGCTCCAATATTCGAGACTTTATTCCCAGCCAGCCTTAGAACATCTTAGAGAAGATTATGTTGTTACTCATTTTTGAATCTTATCAGAGCACTTCCTGATCTGTGATAGTAGAGGCTGATGATTATTTTGTGGAGAGTGCAGTTTCAGGTACTAATCAGGAATGAATAGTAGATATGGTGGACAAATTGAGAAAATACTGAACTCGAGTCAAATTGGACTAAATGCTATTATCATTTTTTTCTCTAATATGAAGAAAATTTAAATTTAGATAAATGCAAGCAGCTATACAATGTATATATGAAGTTTCCTTACCCAGCTCTTTCATATAAGTTCTATGAATGTTTCCACTTTCTACCCAAAAACTGCTGGAAGGTTTTATGTCAAAATGGTTGTACATTTTTCCAAGTCATATTTCAGCCTTCTATTAATATGAAATTGAGAAATTGTTTTGCTTAGCAAAAGATGGTGAAATTGATTTGTGAATGCCACTAGCTATAAAAAGGTATTAGAAGGAATTCCAAATAGACTAAGAAATAATCTTAAGTTTCAGGAAGAAAACTAGGAAATGTACACCCAGTTTTTTTTTTTTTCCCCACACATATTTTTAAACCCAGGAACTATTACATTCATACTAGAAACCAAGGTGAACTTGGTATATAGTATTTTGATAAACTGTTAGATTTTTTGAATTGATTGTATTAAATTATTGAAATCTTTATTTGCATTTGAATGCGTAATTTTCATCTTTAAAGGTCCTTTGCCTTTCATTTTTATTACTTGACTCACGAAGACTAAATTAGGAATGGCAATCTAAAATATCCAGGAAGAAAATAATTTCTGTATATAAAAATGAATAAAAATTCTTTTCAAGCCATGTTGTTTAAATGACACTCCACAAGTCTACCTACTCTGCCACATCGTGTATTAGTTGAATAAACGACTTCTAGATTCTCTTGCGGAGTAGTAGCTGGATTATTAGGGAACCCTTTTGTCTTTTTGTGTATGACATACTTGCCATTGAGGCACACTTAATATGTGCCATTCATGTTTTAAGCTAGATGGAGTGATAGACATAAATAAGTCAAAATCCCTCTAAGCTGACAGTCTAGTGGTGGAGCAAAAAATGAGATCACTAATAGATACACAGTGTACACTATATGAACTGTCAGACTTGATGCGCTGATTTCAAGGTCGGGAGGCAAGATATAGGAGGAAGTTTCTCAGCAGAGGTGGTAATATGTAGACCTTACAAATCAAAGTTTATTTTGGGCTGTGCTGCATGGCACATGGGATTTTAGGTTCCTAACCAGGGACTGAATCTGGACCCTCAACAGTGAAAGTGTAGAATCCTAACCACTGGGTGGTCAGGAAATTCCCCAGATCCCACAGCCTTAGCTACCCACTGCAGCAGTGAACGATGTGCTTTATGTTGGATATCTAGAGGGCCTGGATATTGGATTATAATTCATGGTGTAGGTCTGCACTGTCGAGTTTAATTCATTAAAATTAAAATAGTTTTCAATTACAGTAGCCGTATTTCAAGTATTCAGAAGTCAGGTGTGACTGAATTTTAAAATCAGTTTTTTATTTGCAATATTCATATTTAAAGGTCCTCAGCAGCCATATTTAGCTAATAGCTACCAATATTGAATGGACATTACAGATTAAAGATTAGTATTTTGATTGCAGAAGTTTATTTTGGATAGGTATGGTCTTGCTAATAGCCCCCTAAAGGCAGAGGAAAGTGTTTGTTAATAAAAGTTCTCTTATAGAAAGCATTTTTAGCAAATCTTTGAAGCAAAAGTATTGTGAATTTTAAAATAGTTCTAAACAATTTTTCCTGTTTTTTTCTTGTCACAAAAGGAAAAACTACTAGAAACCATGAAGGTTCACTTTTTTTCCTTGTCAAATTAAAAACTTTGATTGTTACATGGGTGGAAAAGCTAGACGTGAAAGTTTCATTTTGAGTATATTCTTGAGGCAAAGTTGTCTTCTTCATAAAGGGGGTCCAGGTTCTTTGTTAAGGAAATTAGATTTAATAAAATATTGACAGTCATACAGAATTTAAGACTAAAAAATAACAAGATGAGTAAGATAAAGCCAACCCTTCGTTTTGAGCTGTTTCAATTTAAGGAGCCAGATCCTACTTTAATCCCATAGCAAATAGGGCAATAATGTATAAATAAAGACAAACTATGTGGGAAGTGATAATAAATTGGATTGCTTTGCCTTGGAATCAATAGTGTAAAGAAGTGGCCTTGGTCCTGAATTCATGGACTGCTCTAGCCTTTCTAGCTTTGAACAGCCCCTCTCCCCAAGTAGTTCTAACAGGTTTGGCCTCCTGAATTTCCCATCTGCTTCATCTTTCACTGCTTATTACTGATTTTTGCCACCTTTTTTTTTTTGGTCATCTGTTCAGACGTTTCATTCTCCCAAGTTCAGACGTTTCTGGGGAAAATGCAAAAGCACAACTGCAGGTAGTCTGGACCTTCTATTATTTTTCTCATTCTTTTACTGAACTTCACTGCTTAACCACAAACACTGCACTTTTCATTGTTCTTAAATTTCCCGTGCTGGAACTTCCGTGGCGGTAACACTGCTGCTTCCACTGCAAGGGGAACAGGTTCAGTCCCTGGTGATGGAACTAAAATCCCACATGCTGTGTGGCACAGGAAAAAAAAAACACAAAAAACTTCGAGTGCTATGTTAGGTAGGTATGAATGAGTGGAAGTTATTTGATTCCCCCCCTTACTTAGCCAATAATTTCATGTTAACAAAATCTTAACTTTGATTTAGGCATAGTCTCCATTTCCAGCTCTCCATTTTATGATATGCATCTTGAACCTTTGCTTTCTATTCAGAAGACCTTTCCCGCTCCACTTGTCTCTGGTTTCTAACTACAGTTTGTAATTTCTTGAGCCTTGCTCAGATATTTTCATTATCTTCTTCCTTCCTTCTGTCTGGAATAAGTTTTGAAAAACACAGGAAATTAACCTTAGGTCCTCCCTTTTCCTTTTCACTACACTTGAGATTCCATAAACTAGCTTACAGTTTTATGTGCACTTCACATTTCCTAAAGTGAAAAAGTGAAGTCGCTCAGTCATGTCCGACTCTGTGACCCCATGGACTATAGCCCACCAGGCTCCATCCATGGAATTTTCTAGTCAAGTGTACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATTTTCCAACCCAGGGATCGAACCTGGGTCTCCTGCATTGCAGGCAGATGCTTTACCGTCTGAGCCACCAGGGAATCCCAACATTTCTTAGGTCTCACTCATGTTTTTATCTTTACTTTCTACTGGTGATTGGTGATAATCCCAAATGAGACTCTGCTCTTGTAAGAGGCTACACCATAGTTTACATCTTGACACTCTGGGCATTTGCTCTCTATTGGGTCTCTTGGCGCAGTTGCCAAATCATGTCCGACTCTTTGTGACCCCATAGACTTCAGCACCAGGCTTCAATGCCCTTCACTATCTCCCGGAGTTTGCTCAGATTAATGTCCATTGAGTCGGTGATGCTATCTAACTTACTCATCCTCTGCCACCCTCTTGACTTCAACCTTTCCCTGGGATGTCACTTTAGCCTTGTTCCTCTCAGATCAGATCAGATCAGTCGCTCAGTCGTGTCCAACTCTTTGTGACCCCATGAATCGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTGAGACTCACGTCCATTGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTGTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTGTTCCTCTAGTCTGTGTCTTTTTACTGGTTCTTCAGTGCTTTCTGGGTTTCTGTACACCTTAAAAGGTGAAGAAATACAGAATACTGGAGGAAAATTTATCTGTAGTCCAGTTATTCTGCCAGTGGTTGCTTTTAAAATCACTTGTTTCCTTTTTGCAGGAATGTGTTTTGCCATATGGATAAATGTCTGTTAAAGATCTGTTTATTAATTTAACAGGGTAAGAAATTTTCTGTTACACATAATGTTTATAAATTTCAATCGCATTCTGTGGTGGGTGAACCATACTTTATTGTAAGACATTTAACATTCCAATTTTTGCTATTAATAATAGTCCATGAGTATCTTTGCACAAAGTTTTTGTTTGTTCCTAAGATAGTTTGCCAGCATTTTAAGACTTTCTGCTTACATCCCAGGTTGCATTCAAAGAGATTGAACTAGTTCACAGATGGATGGGTTTTAGCCTATGCTTGTTTAACAAATGTATAGAACTGTTTTATGTGCTAAGCTATTGTTCTCAGAACTTATATGTGGACAAACAGGCAAACATTCCTACCCTTGTGAAGTTTGAGGAGGGAAGTGGGAGATGAGAACTTTAAAAATTTTACTTGGGGGGGTGTCAAACTTTTTATTTCACCAACATTCCCTGTTAATGGAAAAACAAATGCTACTTTGTTCTTAAATATAAAGTGTGTAAAACTTATTTAAATCCATTCATGTATTGGGGTGGGGAGGAGAAAGGAGTTGGGGATTGATGCTCTAGGAATACAGAGGGTTATCTTGGGAAAATGTAAGAGAAATAAAAAGTCTCATCTGGCCA EMBV3_07435 TATGTTGAAAACTATGATCCCACCGATTCTGCCGCTTTGCACGAAGCCTACGGCTACGCG Gene GeneID:100336468|LOC100336468:XM_002691966:18_cdna Constitutive 0 NULL GeneID:100336468 12 GENE LOC100336468 NULL ABCC4 protein-like EMBV3_19438 CATTTTCTCACAGACACCTTTACTGCCTATTACCGCCTGCTCATCACTCACCTGGGCCTG Gene GeneID:540456|C24H18ORF10:NM_001102244:115_cdna UTR3_Alt 3 NULL GeneID:540456 24 GENE C24H18ORF10 MGC152138 chromosome 18 open reading frame 10 ortholog EMBV3_01667 GACGCCGACAAGCTTCTGCACATCCAGATAGAAGATTCCCTGGAAGCAAACATTACACCC Gene GeneID:513107|STYXL1:NM_001101968:164_cdna Constitutive 2 NULL GeneID:513107 25 GENE STYXL1 MGC179477 serine/threonine/tyrosine interacting-like 1 EMBV3_33924 GGACCCACGGAGGCCCAACAAAGTGCTGAGCTGAAGTGGTGTGCTTGGGTCGCTGTCTAC Variant GeneID:508733|C7H19orf56:NM_001046010:32_cdna 59^164 1 EMBV3_26352 GeneID:508733 7 GENE C7H19orf56 C19orf56 MGC137067 chromosome 19 open reading frame 56 ortholog EMBV3_34105 CATGGTTACGCTGTACGGGGGCGTAGAGGGGCGCTCAGCAGGGAGACCCCCTTTCCCGTT Variant GeneID:508132|NAGK:NM_001034314:8_cdna 79^716 4 EMBV3_15492 GeneID:508132 11 GENE NAGK MGC127109 N-acetylglucosamine kinase EMBV3_07945 CTGAGCATTTATACCCAGAATTTATCCAAACCCCTTTTAATCTCCTTGGCTGGATTTATC Gene BVT0102_280675 + 0 NULL GK000017.2:12741795-12818450 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074861 TCONS_00074862 1 XLOC_046446 Coding TCONS_00074862 XLOC_046446 Coding Coding ZNF827 17:12582158-12744878 j TSS56612 7208 1 TCONS_00074862_5 802 15 0.955794959408551 1.8851717048728e-05 2.77038464719143e-06 3.20783563752536e-07 1.13716247053185e-06 0 4.95626170169673e-06 1.60774714255205e-06 0 0.00014238837442863 5.13007865557817e-06 9.48653930134014e-07 0 1.98520821378273e-06 6.60089449109342e-06 5.38851282466466e-09 0.000120872899811061 6.88052303548022e-06 0.000125271910567018 6.45403394876961e-06 1.18431388864184e-06 5.01602578991251e-12 1.70254150127674e-06 2.34260341207793e-11 1.39258462601219e-05 1.15346210720138e-05 4.75679061081236e-07 8.64139722888066e-11 1.31510202426365e-06 1.88725062843506e-11 8.23302348623322e-07 XM_005217514.1 ZNF827 PREDICTED: Bos taurus zinc finger protein 827 (ZNF827), transcript 0.0 1.281e+04 99.69 0.992092119866815 NM_178835.3 ZNF827 Homo sapiens zinc finger protein 827 (ZNF827), mRNA. 0.0 5757 90.79 0.572419533851276 TCONS_00074862_5 sp|Q17R98|ZN827_HUMAN ZN827_HUMAN Zinc finger protein 827; 0.0 1448 94.40 0.998753117206983 4 coding 0 0 0 0 -0.0089574686931927 0.953771679712297 0.0286444587297933 0.584660712679494 AACCACAGGAGCCCAACTACCCCTGCTTTGGTCAGCGCTTGCCTCATTGTCCTACTTCAGATGTTAGTAGGCAGGACGAGGCGGAGGGAGAACTCAGTGAAGGAGAACACTGGTATGGGAACTCTTCGGAGACGCCGTCGGAAGCCTCCTATGGAGAAGTCCAGGAGAACTATAAGCTGTGCCTGGAGGACCGGATCCAAGAGCAGTCCACGTCTCCAGACACCTCCTTGGGAAGCGCGACCCCCAGCAGCCACACGTTGGAGCTGGTGGCACTCGACGGGGAGGTCCTGCGAGACCCACTGCAGTGTCCAGATCACCTCTCCCCCGGCGTGTCTTCTCTGTGTGAGGAGGACCACCCAGGCTCCACCAAGCCCCTGAGCAGCAACTTGAGGCGGCTGCTGGAAGCCGGCTCCCTCAAACTGGATGCCGCGGCCACTGCCAACGGCAGGGTGGAATCCCCGGTCAACGCGGGCTCGAATCTCTCCTTTTCCCCACCGTCCCACCACGCCCAGCAGCTCAGCGTGCTGGCCAGGAAGCTGGCCGAGAAGCAGGAACAGAATGACCAATACCCTCCAAGTAACCGTTTCCTATGGAATCAAGGTAAGTGGTTGCCAAACTCAACCACCACCTGCGGCTTGTCCCCGGATTCCGCCATCCTCAAACTGAAAGCTGCAGCCAATGCCGTCCTGCAGGACAAATCGCTGACCAGGACGGAGGAGACCGTGCGATTTGAGTCCTTTTCCTCCCCTTTCAGCTCCCAGTCTGCCAGCTCCACCTTGGCAGCTTTATCCAAGAAAGTCAGCGAGAGAAGCTTGACTCCTGGCCAGGAACACCCGCCCCCGGCCAGCTCTTTCCTTTCCCTGGCTTCCATGACCTCCTCGGCGGCCCTTCTGAAAGAGGTCGCAGCGAGGGCTGCCGGGACCCTTCTGGCTGAGAAATCGTCACTGGTGCCTGAGGACCCTCTACCGCCACCGCCTTCGGAGAAGAAGCAAGAGAAAGTAACCCCGCCTCCTCCGCCGCCGCCTCCGCCGCCTCCTCCACCACCGCCACAGTCCTTGGAATTATTGTTGCTCCCAGTTCCCAAGGGAAGAGTGTCTAAGCCCTCCAACTCAGCCTCAGAAGAGGAAAGCGGAAAGCCTTTCCAGTGTCCCATATGCGGTCTGGTTATAAAACGGAAGAGTTACTGGAAGCGGCACATGGTGATTCACACAGGTTTAAAAAGTCATCAGTGTCCGCTCTGTCCGTTCCGATGTGCTCGCAAGGACAATCTCAAATCCCACATGAAGGTTCATCAGCACCAGGACCGGGGAGAGACCTTTCAGTGCCAGCTCTGCCCTTTCACTTCCTCCCGCCACTTCAGCCTGAAGCTGCACATGCGTTGCCATCAGCACTTCCTGAGGACAGAAGCCAAGGTGAAGGAGGAGACCCCAGACCCCGAGGCCAAGGGGCCTCCCCACCTCAGTGACAGTGCCTGCCTGGGGCAGCAAAGGGAAGGAGGAGGGACAGAGCTAGTGGGGACCATGATGAAGTCCAGCACTCCAGAGAGGACTAGCCAGGGTGGGGCTGGCGTCTCACCTTTGCTGGTGAAGGAGGAGCCCAAGGAAGATAACGGCCTGCCAACCTCCTTTCCTCTGAATGCTACCGACAGGCCAGCCAACCACACAAAGCTGAGAGAGCCCTCCGAGTTCGCGGCCAACAGTGCGTCCGCGTTGTTCAGCCAGGACATCTCTGTTAAGATGGCGTCTGATTTTCTCATGAAGCTGTCAGCTGCAAATCAGAAGGAGCCCATGAATCTCAATTTTAAAATAAAAGAGGAGCCTAAGGAAGAGGAGACCCTAAGCGTCACATTGCCTCGGTCCAGCTATGTGTTCAGCCCCGAGTCTGAAGTGTCAGCCGCGAGCATCTCTGAGGACACGCTTAAGCCCCAGGAAGCAAAGGGCAACGTGCTAAGACGGGATATGTCAGTTAAAGCAGCATCGGAACTTCTCATGAAACTATCAGCGGAAAGCTACAAGGACACTCAGATGGTGAAGATTAAAGAGGAGCCTATGGAGGTTGACATCCAGGACTCGCAGGTCTCGATATCACCCAGCTGCAATGTTGGCTACAGCACTTTAATCGGGCGAGAGAAAACGGAACCCTTGCAGAAGCTGCCAGAAGGCAGAGTAGCCCCGGAGAGAAACCTCTTCAGTCAGGACATCTCCGTGAAGATGGCTTCCGAGCTGCTTTTTCAACTGTCAGAGAAGGTGAGCAAAGAGCACACTCAGAAAGAAAACACCATCCGGACGACCACCAGCCCTTTCTTTTCAGAAGATACCTTTAGACAATCACCATTCACCTCCAATTCAAAAGACCTGCTGCCCAGTGAATCTGTGCTTCACGGAAGAATATCAGCTCCAGAAACAGAAAAGATAGTCCTCGAGGCAGGAAACGGGTTGCCCTCCTGGAAATTCAACGACCAGCTCTTCCCCTGTGACGTGTGTGGGAAAGTATTTGGGCGGCAGCAGACGCTGTCCCGACACCTGTCTCTGCACACAGAGGAAAGAAAATACAAATGCCACTTGTGCCCCTATGCTGCTAAGTGCCGCGCAAACCTGAACCAGCACCTGACTGTCCACTCGGTGAAGCTGGTGAGCACGGACACCGAGGACATCGTCAGCGCCGTCACCTCCGAAGGCAGTGATGGGAAGAAGCACCCTTATTATTACAGCTGTCACGTGTGTGGATTTGAGACGGAGCTCAACGTCCAGTTTGTCAGCCACATGTCGCTCCACGTGGACAAGGAGCAGTGGATGTTCTCCATCTGCTGCACGGCCTGCGACTTCGTCACCATGGAGGAGGCGGAGATAAAGGCACACATCGGCACCAAGCACACAGGGGAAGACAGGAAGACCCCCAGTGAATCAAATAGCCCCTCTTCCTCATCCCTCTCAGCTCTGAGTGATTCGGCCAACAGCAAGGACGATTCAGACAGCTCTCAGAAGAACAAGAGTGGCAGTAACCTGCTGGTCATCTCTGTCATGCCTGGGAGCCAGCCCTCCCTGAATAGTGAGGAAAAGCCAGAGAAAGCCTCGGTCCTTGCAGGGTTCGAATGCGTTTTTTGCAACTTTGTCTGCAAGACGAAGAACATGTTTGAGCGCCATCTGCAGATCCACCTCATCACCCGGATGTTTGAGTGCGACGTGTGCCACAAGTTCATGAAGACCCCCGAACAGCTGCTGGAACATAAGAAATGCCACACTGTCCCCACCGGTGGGCTCAACTCAGGACAGTGGTGAGTTTCAGACTCCTCTAGGTGCCCATTCTGCATTTATTCCACCAACCGCCCCGCCGCCATGGAGTGCCACGTGAAGACCCACTACAAGATGGAGTACAAGTGCCGGATCTGCCAGACGGTGAAGGCCAACCAGCTGGAGCTGGAGACGCACACCCGCGCGCATCGCCTGGGCAACCACTACAAGTGCGACCAGTGCGGCTACCTGTCCAAGACCGCCAACAAGCTCATCGAGCACGTGCGCGTGCACACCGGGGAGCGGCCCTTCCACTGTGACCAGTGCAGCTACAGCTGCAAACGCAAGGACAATCTCAACCTGCACAAGAAGCTGAAGCACGCCCCGCGCCAGACCTTCAGCTGCGAAGAGTGCCTGTTCAAGACCACTCACCCCTTCGTCTTCAGCCGCCACGTCAAGAAGCACCAGAGCGCGGACAGCCCGGAGGAGGACAAGAAGGGCCCGGCCCCGGCCTCCCAGGACGCCGGCGGCCCCGGGGCCCCGCTGCTGGTGGTCGGGAGCGCCCGCCACCTGCTGTCTCCGCTGTCGGTCATGTCCGCCTCCCACGCTCTGCAGACCGTGGCCCTGTCGGCCGCCCACAGCGGAGGCGGCGGCGGCTCCGAGCCCAACCTGGCACTCAAGGCCATGCCCTTGAACGGCTCCCCTCTGCGCTTTGACAAGTACCGGAACTCGGATTTCGCCCATCTCATTCCCTTGACGATGTTATACCCCAAGAACCAATTGGATCTCACATTCCACCCTCCCCGACCTCAGACTGCGCCGCCCAGCATCCCCTCGCCCAAACACTCCTTCCTGGCCTACCTGGGACTGAGAGAGAGAGCCGAGACTGTCTGAGGGCAGCCGGGCTCCGTACCAAAAACCAAGAGACAGAGACAGACAAAAAAAAGACAAAACCCGCGAAACTTAAAACACAACCCCAGCAGGTGTACGTTGCTGCAAAAACCTACAGGCCCGCCCGGGTCTGAACCACGTGTACTGTATATCTTTAGTAAGGAATAGAGAATTGGCTCTGTGTGTATACCTATTGCATTGACCTGAAAGCTGCTTTATCCAGTCTTCAGAGAGGTGACCTACTGCACCGTCTACCTTCAGAGGCATGCCTCCCCAGCCACCCACTCCCACTCTCGGCCCTTCTCCTTACTTTGAAAGGAAACCTGTCTTGTTACACCCTAAAGAGAGTGTCCTTAATAGCAATCAGCACTTGTAAGCTTCCATACCGGTGCATTTTGTTTTCTGTTGGGCGAATGGGGCATGTGGGCGTTTGTGGATTCGGAAAGAGACAGCCGTGTCGTGTGCCATGACATTTGCACCTTCTTTGTACTGGCTTCTTTGACAGCGATGAGCATTGTTTGCCCTCCTGGGTGGTTCATGCGCTGCATTCCCTCCCGGAGCTCCTTCATCACCTTTCCCCTCTCTATTTTGTGGCTGCAGAGTGGTAGGGCCTGGTGCTTACTCGATGAAGGAATGGTAGACAACTCAGTGCTGCCTGCGATTTCTCCAGAGTCCTGGAGATCTTGTGCTCGCGTCTCTGGTTATGAAGAGAGCAATCGAGAGCCCCACCTGGAAGAAATAGCTTGCAGCACTGCAGCTGACATCACAAAACTCAAGTGTGTTTTGTGTGTGTGTCCATATGTATGCAATGTGTATGGTACACACACTGCATCATTTTTTAAGGGCAGATTAAAAAAATATATATATATGTGATGTATTAAGTCAGTGGTTACCATTTGTTTGCAGGAAAAGAAAAAACAGTGTATGAGTGAAAATTTTTATGGTTGATAAATCCAGCCAAGGAGATTAAAAGGGGTTTGGATAAATTCTGGGTATAAATGCTCAGACTAAAAAAAAAAAAAAGAAACGGCAGTTTTGCACAGTGCTTTGGTCTTGCACTAGCTTTTGTTTCTCATCTGCAAAAAAAAAGTAACATAAAAGGAAGAAAATGTACCTTTTTTATGGAATGAGTAGACTGTATGTTTGAAACTTTTGTCATAACCTCTTTGACATATAACAACCCAACAAAAAGGTGCTGTTTAGTCCTACCGTTCAGTTTATGCCCCTGAGACGTTTCCATTGTGTTTGCAAATTGTCTGGCTATAGCGGTGTTCTCCATGTTATTAGTAATTCTGTATTCCATTTTGTTAACGCCTGGTAGATATAACCTGCTAGGAGGCTAACTTTATACTTATTTAAAGCTCTTATTTTGTGGTCATTAAAATGGCAACTTATGTGCAGCACTTTATTGCAGCAAGAAGCAGGTGTGGATTGGTTGTACAACCCCTCGCTATTCTTAAAAAGTCAGGGGTGATGTAAAAAGAAAAGAATCTTTGGCTAAACATGTTAATGGCTTGTATTTTTAAGACAACAGAATTTCCAGTATGAAACAGGCTAAAAAAGCAGGAAGAAATGTGCTTTGTATGATAATGGGAAGTTTGGAATATAAAGTTTATATATTATTTATCTGTGAAGAACTGGTGTACAGGAGGAATGCTTTCTTACTGCGTTGCTGTTTTCCATCATGTGTTACCCTAGAGGTGGGATTTTTTTTTTCCATCTGTTTTCATCCGGAGGGAAATAAAAGCATCCCGAATTTTCTTCCTCTAGTCGGTTTGCTTCCCCGAAAGCTCCCCCTTGTACAAAGTGCAGGAAGCCGGAAGTCTGCACCTTCTGTCCACACACGCTCCTCCCCCACACCCACCCTTCCTCCCCCAGACCTGGCAGGTGTGCCCCGCTCCCCTTGCCAGTCACCCAGCCCTGGCAAGCCTGTTTACACTAAGGAGCTGTCCCCGGGGGCGGGGAGGCCGAGCCAGCGAGGGCGGGAAGCTCCCGCTCCCTGGGTCGTTCTCCAGCAGAGACGCCTGTTCTTGGCCACGTTTGAAATGTCACTCAGCGTCGCCCTGTCAGTGTTTCAGTCAAAGGCACTGTAGACAGGTATGGACAATACACTCCAAGAATACCGGGCTTGTGGGTGGGTTGGTGTTTTTTCCAAGTCACGTCTTTACCCCCATGTGCTGAAGAATGTGCCACTTGGCTAGTCACCTGCTTTTCACAATTGCAAGTTCAGTAATTCAAGTTCAGTGAAGGAGGGCCATGGGGAACCCACAGAGGCTGGCAGGAGGGCGAGCCCCGCGTGAGCAACGGCAGGTTGAAACCTGAAGGGCGGCCCTGACAGGACTGCGGATTTTACAGCGTGCCACTTGTGCAATACGAGGTCCTAGGGTAAAACTTTCACGATCAAGAGGGGTGTTGGAAGGAGACGGTTACCGCTCAGATGTGTGCCACTGAACTCGGATTTGAATGACTTAGTGATGCTTAATGTAATTGGGCAACTTTTTTAGCACTTTGGAAAGAGTCATCAATCTTTCTGGTAAATTATAAAAGTTTTCTGAGTGAGAAAAGGTGTGTTTGGAGTTTGTTTGACTTTTTATATTATTATTATTGTTATTAATAAAGAAAAATCTACAGCATTTTTCAGATTCCACTGAGGTAATACATACCCCTGAATTTGGTTTGCAGTTTGATACTCAGGGAAGGATGTATTCCATAGATATCCTTTCCGTGTAAAACACTAACGTCTTTGAGATAGTCACCTGCCAACTAACTTTGATTCTGTTTTCACTATGCATTCTTCAATGAAAGCTAGCTTATTTTTCCATATAGTGATACAGTTAGAGTTCTCTGCACTTTCTTCTCTCCTTTTTTTAACTCCTCGTATTATGTTCAGATGATCATACTGTCAAGGTTTATGTACATTACTGAAAATTTGTATTGTATAAAGCTTTTTGCATTACAAGGCTGTACAGGGTCATTTTGACAGTAACTGGTATATTCCTTTGCATCTTATGTTGCATTGCCAATTTCTAGTGTATCCAGTTTGGAAGTATAATATACTCTAATTAAAAAAAAAAAAGGTTGGCTATA EMBV3_25884 AGCTAGAGATCCCAGAGAAGTGACAGAACAGCCTAGAGTTTGTGCCTGAACCATGTTCCC Gene GeneID:525559|ZNF398:XM_002687036:122_cdna Constitutive 0 NULL GeneID:525559 4 GENE ZNF398 NULL zinc finger protein 398 EMBV3_24884 CAGGGGCTACCACTTTTCCGGACTGCACACCAGCCATGTATAGCACATCAGTCTTGAAGT Gene BVV0102_205188 + 0 NULL GK000007.2:2447652-2453799 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43226 GCAAGAAAACAGTTGTGAACATAATTACTCCATCCTGTATAGCGGAACGTGGCTGCCAGC Gene GeneID:520327|KYNU:XM_002685368:270_cdna Constitutive 0 NULL GeneID:520327 2 GENE KYNU NULL kynureninase (L-kynurenine hydrolase) EMBV3_17453 GGATTCCCGAGGCTTAAATACAGGAATCAAAGAAATATCCACGGACATACTCACAGATAC Gene BVT0102_109697 - 0 NULL GK000009.2:57830273-58273530 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04015 CCTTTCGCCTTAGGGCCCATCTCAGTCAGCACCAGAGAATTCACACCCAGGAGAAATCAT Gene GeneID:784785|LOC784785:XR_083931:927_cdna Constitutive 0 NULL GeneID:784785 18 PSEUDO LOC784785 NULL similar to Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100) EMBV3_34181 CTGCTCCTGACCGGCAGCTTTTGAACGCATTAGATGAAAATGCAAAACTTGTCCAGCTCC Gene BVT0101_030693 - 0 NULL GK000026.2:37630286-37796164 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152277 TCONS_00152276 TCONS_00152274 TCONS_00152282 TCONS_00152283 TCONS_00152279 TCONS_00152275 TCONS_00152278 TCONS_00152280 TCONS_00152273 TCONS_00152281 1 XLOC_092295 Coding TCONS_00152283 XLOC_092295 Coding Coding KIAA1598 26:37615572-37708265 = TSS113602 1784 1 TCONS_00152283_3 559 17 0.980936866180469 0.00904000260594069 0.00977382085020572 0.00659795806837379 0.00726805024537394 0.0140231284418091 0.00241903910476158 0.00575753104978591 0.00606969623124761 0.00681323699837857 0.00409375351283047 0.00181790377997571 0.000449287773518037 0.00208234891962767 0.00861506420195699 0.00424976183033904 0.00708605516738381 0.00334086519851819 0.000228021822147197 0.00284200929973224 0.00636101784440755 0.00291533701047124 2.12869752519048e-05 0.00110942754946228 0.00208874013077627 0.00666598139951765 0.0053426368816385 0.00564217224996038 0.000500708618431618 0.000519879522721635 0.00122487404175564 XM_003584108.2 KIAA1598 PREDICTED: Bos taurus KIAA1598 ortholog (KIAA1598), transcript 0.0 3113 100.00 0.966928251121076 NM_001258299.1 KIAA1598 Homo sapiens KIAA1598 (KIAA1598), transcript variant 4, mRNA. 0.0 2506 91.37 0.993273542600897 TCONS_00152283_3 sp|A0MZ66|SHOT1_HUMAN SHOT1_HUMAN Shootin-1; 0.0 927 92.31 0.998211091234347 0 coding 0 0 0 0 0.0654577829095699 0.538062801882722 0.0242139592587873 0.67678048604314 CCCCCTCTCTTCTCCCTCCTTTCCTTTTATTCCCGGCCCCACCTGCCAAAATGAACAGCTCGGAAGAGGAGAAGCAGCTGCAGCTCATCTCCAGCCTGAAGGAACAAGCGATAGGTGAATATGAAGACCTTAGAGCAGAGAACCAGAAGACAAAGGAGAAGTGCGACAAAATTAGGCAAGAACGAGATGAAGCAGTTAAAAAACTGGAGGAATTTCAGAAAATTTCTCACATGGTTATAGAGGAAGTGAATTTTATGCAGAACCATCTTGAAATAGAGAAGACTTGTCGAGAAAGTGCTGAAGCTTTGGCAACAAAGTTAAATAAAGAAAATAAAGCATTGAAAAGAATCAGCATGTTATACATGGCCAAGCTGGGGCCAGATGTAATAACTGAGGAGATTAACATTGATGATGAAGATTCAGCGATGGACCCGGAGGATGTTGCCAAGACTTGCGTCTCAGTACAGTGTCAGAAGCAGATCAAAGAACTTCGAGATCAAATTGTATCTGTTCAGGAGGAAAAGAAGATATTAGCCATCGAACTGGAAAATCTCAAGAGCAGACTTGTAGAAGTAACAGAAGAAGTAAATAAAGTTAAACAAGAAAAAGATGTTTTGAATTTGGAAGTTCTTGAACAGAGGAAAGTCTTAGAAAAATGCAATAGAGTGTCCATGCTAGCAGTAGAAGAGTATGAGGAAATGCAGGTGAACTTGGAGCTGGAGAAGGACCTTCGAAAGAAAGCAGAGTCATTTGCACAAGAGATGTTTATCGAACAGAACAAGCTAAAGAGACAAAGCCACCTTCTACTACAGAGCTCTGCTCCTGACCGGCAGCTTTTGAACGCATTAGATGAAAATGCAAAACTTGTCCAGCTCCTTGAAGAAGAGAGAATTCAACATCAACAAAAGGTCAAAGAACTAGAAGAGCAACTACAGAATGAAACTTTCCACAAGGAGATACACAGTCTCAAACAGCAACTGGAGCTTCTCGAAGAAGATAAAAAAGAACTGGAATTGAAATACCAGAATTCTGAGGAGAAAGCTAGAAATTTAAAGCATTCCGTTGATGAACTCCAGAAACGGGTGAACCAGTCTGAGAATTCAGTACCTCCGCCACCACCTCCTCCACCCCCACCTCCTCCCCCTCCTCCCCCCAATCCTATCCGATCACTCATGTCCATGATCCGGAAGCGATCCCACTCCAGCAGCGGCGGTGCTAAGAAAGAAAAGGCGGCTCAACCAGAAACAACTGAAGAAGTCACAGACCTGAAGCGGCAAGCAGTTGAAGAGATGATGGACAGAATTAAAAAGGGAGTTCATCTCAGACCGGTTAATCAGACAGCTAGGCCCAATGCAAAGCCGGAATCTGCAAAAGGCTCTGAAAGTGCCGTGAATGAACTAAAAGGAATGCTGGGGACACTTAACAAATCCACTAGTTCAAGAAGCTTAAAATCCCTTCACATTGAAAACAGTGAAACTGAGTTAGAAAGGATTTTGCGTCGCAGAAAGTTGACAACAGAAGCAGATAGCAGTAGTCCAACTGGAATATTAGCCACCTCAGAGTCCAAATCCATGCCCGTGTTGGGTTCTGTATCCAGTGTAACAAAAACAGCCTTGAACAAGAAAACTCTGGAGGCAGAATTCAACAGCCCGCCCCCCCCAACACCTGAGCCAGGTGAAGGGTCGTGTAAATGGGAAGGATGCTCAAGTTCCAAGGTTACATTTCAATAATCTTAATCAGAAAATACTGCAACTCCTTCCTCCTTTTGTCTGCCTTTTATTCTC EMBV3_16270 TTCACTACCATCTGGAATGCCAACACCGAGTGGTGTATGAAGAAACACGGCGTGGACGTA Gene GeneID:515397|HYAL1:NM_001017941:178_cdna Constitutive 0 NULL GeneID:515397 22 GENE HYAL1 NULL hyaluronoglucosaminidase 1 EMBV3_06557 GCTCTTGGCCTATGTGCTTCTCACCTATGTCTTGCTGCTCAACATGCTCATTGCGCTCAT Gene GeneID:507664|TRPV2:NM_001024493:484_cdna Constitutive 0 NULL GeneID:507664 19 GENE TRPV2 NULL transient receptor potential cation channel, subfamily V, member 2 EMBV3_07216 AGACCTCAAAGGCTGCCCACCCCAGATCCAGTGGTAACGGCGCACAGATGCCAGCAGCCA Gene GeneID:618368|SPATA2L:NM_001076502:453_cdna Constitutive 0 NULL GeneID:618368 18 GENE SPATA2L MGC152236 spermatogenesis associated 2-like EMBV3_31910 GTCACTTTGCCAGAGACCATCGAGGATGCCGAGAACCTGCAGAGGAAAGCAAAACCCAAA Gene GeneID:519461|SLC22A1:NM_001101098:17_cdna Constitutive 0 NULL GeneID:519461 9 GENE SLC22A1 OCT1 solute carrier family 22 (organic cation transporter), member 1 EMBV3_14330 GGCTGATACTGCTCCGAATTCTACAAGGAATTCAGTTCAACCTTAGGATCCCCTGTCATG Gene GeneID:100335751|LOC100335751:XM_002688113:17_cdna Constitutive 0 NULL GeneID:100335751 6 GENE LOC100335751 NULL hypothetical protein LOC100335751 EMBV3_36610 TGCTCAGCAAGTCGGGGATGGGGAGAGCTGTTCTGGAAGCCAGGCGTCACCTAGCACTTT Gene BVV0101_089816 + 0 NULL GK000016.2:1677500-1716802 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18110 TGCTGTTGCAGCCTTTTCCAGGCTCACCAGGTGCTGACTGTAGACGCCATGTCCAAAAAT Variant GeneID:614757|C7H5orf45:NM_001167943:43_cdna 114^192 3 EMBV3_43669 GeneID:614757 7 GENE C7H5orf45 NULL chromosome 5 open reading frame 45 homolog EMBV3_25525 CGTCAACTGATTCATGGTCGATCAGAACTCTCCCACCCTCTATTGTCAGCACTGTGTAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32283 ACACAGCGGATTGAGCGTGAGAGGAAATTGTTCGTTATTGCGCAGAAAATTCAGACTCGC Gene GeneID:537675|UTP11L:NM_001098092:233_cdna UTR3_Alt 2 NULL GeneID:537675 3 GENE UTP11L MGC138956 UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) EMBV3_19081 GGCCCGAGTCCTTCACAGCGAAAACTGCCCTATCTTCCGTTTTCATTACGGTTCTGCCTT Gene GeneID:100139508|NAV2:XM_002699080:51_cdna Constitutive 0 NULL GeneID:100139508 29 GENE NAV2 NULL neuron navigator 2 EMBV3_24850 CCACTCGCCCGCGAGACCAAAACAAGATGCCCGCGAGACCCGATCAACTCGAGGACTCAA Gene BVV0102_269494 + 1 EMBV3_11694 GK000025.2:36648340-36651005 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149416 1 XLOC_091292 NonCoding TCONS_00149416 XLOC_091292 NonCoding NonCoding - 25:36649088-36649673 - TSS111951 585 1 TCONS_00149416_1 60 1 0 0.000511668104218381 0.00106496134904193 0.000680208088388958 0.000511024522687185 0.000253188919752011 0.000324075062302752 0.000707780097669653 0.00131438172735149 0.00103853108566326 7.73665210453985e-05 9.78282546191555e-05 8.5572109370603e-05 0.00014223789502793 0.000739773596267028 0 4.51480182835246e-05 0 0 0.000723221241702844 0.000577772637562088 0.000176435769951479 0 0 0 0.000994857666998455 0.000915309536552216 0.00053082947327177 0 0 0 XM_005225118.1 MEPCE PREDICTED: Bos taurus methylphosphate capping enzyme (MEPCE), 0.0 1056 100.00 0.998290598290598 XM_005250498.1 MEPCE PREDICTED: Homo sapiens methylphosphate capping enzyme (MEPCE), 0.0 762 89.06 0.998290598290598 0 noncoding 0 0 0 0 -0.0234943747588109 0.868726015304174 0.0604124462844533 0.480816221761845 GACCACGCTCCCTTCCCCCCCTCCTTCCCCGAGTGCGCGCGCAGTGCTGCTCGTCTCCCCTGGTCTCGTGCCCAAGCGCCTCCCCGGAAAGCTCGCCCCACTCGCCCGCGAGACCAAAACAAGATGCCCGCGAGACCCGATCAACTCGAGGACTCAACCGCGCGTGCGCCGACCCCTTTCTCCTCCACCACTACCGCTCCGGCGCGAGCGCGCACGGCTGGGGCGCGTTCCTCTCTCCCGGGAATCACGCATGCGCACTCTGCCACCACCCTGATTGCGCGCGCATCGGAGTACGAACCAACTTAACGGCTCCGGGAGTTTAAATATAGCCCTTCTCAGCCCGCCCCCCACCCCCAGAAGCCCACCACCCCAAACTGACACCCTACTTCCCTTCGCAGCTATGTCCGTCCCTACTGATATCCTTTTGTCTCTGCCGCGCGATCCCACCCACCGTAGGCGGGGGACGGGGAGCTGGTGTGAAAAGGTCTCCTTGACACCCGACCCTTGTTCCTGAGGAATGAGTCTCAGCGGTCTCCGCCCGGCTCTAAACCCAGCAACCTCCCCACCCCGCCTCCTTCCTCCCCC TCONS_00147100 . 5' 69 TCONS_00147100 . 5' 69 EMBV3_29549 ACAGAGCTGTCAGTGGTGGAGAGTGTCTTCAAGCTGAACGAAGCCCAGCCTAGCACCATT Gene GeneID:286811|EIF6:NM_174830:767_cdna Constitutive 0 NULL GeneID:286811 13 GENE EIF6 ITGB4BP MGC133866 eukaryotic translation initiation factor 6 EMBV3_08145 CGAGACCAGCTCATCTACCTGCTGGAGCAGGCTGTGCTTCCTGGTCAGACCTCGCATCAA Variant GeneID:526538|VPS33B:NM_001046284:129_cdna 421^563 1 EMBV3_03541 GeneID:526538 21 GENE VPS33B MGC137868 vacuolar protein sorting 33 homolog B (yeast) EMBV3_15511 GCGTCCACCGGCCGAGGATTGTGATTTCCATATTTTAAACGCGAGTCCAGACATCGTGCT Gene BVT0102_387438 + 0 NULL GK000029.2:42738828-42781094 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165301 TCONS_00163761 TCONS_00165300 2 XLOC_100482 XLOC_100021 Coding TCONS_00163761 XLOC_100021 NonCoding NonCoding - 29:42779674-42780760 - TSS122682 992 2 TCONS_00163761_3 65 0.224798387096774 2 0.0875576036866359 0.00058541365251508 0.000308024264124128 0.000278567254179952 7.39328729761655e-05 4.97653243724244e-05 2.03685439874394e-28 7.27595135417069e-05 0.00022060966691442 0.000326977663372652 8.28294814316272e-05 8.55760088292182e-29 1.05305584309682e-20 1.38192437758957e-09 0.000123881111094423 0.000229422682515266 0.00212981954583822 0.000519927659381722 0.00238705328370826 0.000417811751247976 0.00046769577933889 7.2929560842294e-65 0.000475044354800987 8.12061164092e-05 0.00116935867665298 3.7393659997397e-14 3.03142922265065e-24 5.27202630118722e-19 0.000215650939044236 0.000448726076848368 0.00114463832073558 0 noncoding 0 0 0 0 0.0679263794381934 0.725854196934074 -0.0616857517615938 0.214823766924401 ACACTCCTAAACTGGAGGGACAAACGGAGGGGGTGGAGAGTCGGGGAGAGGGTCATCTTTGAGAAGTTGGAACCACGGGCAAGAGAAATAACCTGGCTTTTTCCTGCCTCCTACCTTCCAGTCTCCTGCCTCTGTCTCCGTTTCGCCAAACCCAAGGCTGAATGAAGGCAGCTGTCCTGGAAGCCAGAGAAACTGCACCCTGCAGGGCAATACAGAGCTGAGCAGAAAGTGGCATTTTATGAGAGATTTTTCAGTGTCAGGGCTGTCCTCCACTGAATTCTCCTGAGGGCTTCTACAGTAGACGGAGATGCCCATTCTCTGTCGCAGAGGTCAGAGCTCAGCCAGACCGGAATCATGATGCAGCAGCGGCATGGCAACTGGACTCTGGTCCGGGGCTCTCAAGGGCTTCCGAGCGACCTTAGTGGGGAGGAGCACGATGTCTGGACTCGCGTTTAAAATATGGAAATCACAATCCTCGGCCGGTGGACGCGCGCTCACAACACTCCACTTGGCATCTTCATCCTTGTCCAGAAGGCCCCACAATGTTTTTTGTTTTTTTTTTAAATAAAGGATGAAATAGTCTAAGAAAACAGATAACGTACCCAAGGTCCCAGAGCTGGCAAATCCTAAGGAATTCAGTCTCCACTCTTCCCACGCCAAAGCCCTTTTCGCTCCCCTACCGGTTCTTCCCTCGCCCGGGGGCATCTTCTGGCGGAGGAGGGCTCGTTCAGGTAAAAGCTTGAGTCGGGCTCGATCAAAACCCTGGGGCGCCTGGTAGCGCCCTACGTGCAGGCAGCGTGCCGGTTCGGCGTCGCAAATGGCGGAAGACCCGTCAGGCTCGGCTGGCCGGCTCCGGACGCTCCCGGCCGGGAGGAGCTCAGGGTCCTCTCCCGCGGGCCAGCGACCCCCACCTCTGCGCGCTGGGGCAGCCGGAAGCCCGCGGCCCTGCCCGCCCCTGGCGGGTCCCCGGGATTCTAACGGAGCCGCGTGCC TCONS_00163762 s 5' 132 TCONS_00163762 s 5' 1217 EMBV3_16671 TGCCCCCTGCAGCCTCTCTGCCCTGGAGTTGCTGTTTTGGAGAACTAGTAATGTATCTAA Gene GeneID:785063|LOC785063:XM_002691275:340_cdna Constitutive 0 NULL GeneID:785063 11 GENE LOC785063 NULL similar to ankyrin repeat domain 57 EMBV3_15655 GACTGCTGTTGTAAGGGGTTCCTTTTCCCCAAACAGTGGGACTTGTGACCTGACTTAGTG Gene BVT0102_203948 + 0 NULL GK000005.2:49421016-49502463 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194932 1 XLOC_117884 Coding TCONS_00194932 XLOC_117884 NonCoding Coding - 5:49488611-49494687 - TSS145359 1622 1 TCONS_00194932_1 73 0.159062885326757 2 0.733333333333333 6.86058367153524e-05 0.00015765336695308 0.000422189090990357 0.000941799837725567 0.0003866474122244 0.000477449356108981 0 8.61580014167235e-05 0.000113750776125936 1.84050668599204e-19 3.85954521797728e-25 2.75444883452925e-17 1.93961218050719e-105 4.33742376740914e-24 7.79108401670708e-27 0 0 0 3.06614522300416e-05 0.000774417072557694 9.15112279745383e-05 0 0 0 0.000195311835384112 5.60556394573303e-05 1.88760978469698e-05 0 0 0 XM_005204442.1 PTGER3 PREDICTED: Bos taurus prostaglandin E receptor 3 (subtype EP3) (PTGER3), transcript variant X3, mRNA. 1e-15 89.7 79.81 0.063501849568434 0 noncoding 0 0 0 0 -0.58374277780391 0.248355712160465 -0.00985602536323786 0.843408769755229 CTCTCTCACTTTTTGGCAGACCTGACTAGCAAAGCTGTCCTGGGGCACAGGCATCTCTTGTCCTCATTGTCTCTTTGGAAGAGACATACACATTCTTCCACTATTTTCAGCCTTTTAAAGCCCCATATACTCCGCCTACTTGCGATCATAATGAGCTTCGGCTGTGGAATGGGGAAACAGGCTGGTAGGTGGCGTCAATGAGTGTGGGTGAGATTCTGCAGACCTAGAATTTATTTGATTCTGCCCTGAAGTTTTTCAAAGCTTACTTTTCTACTGTTATCCGTTCTGGAGTTTCTTTTCTTCTGGTAGGGTGATCAGGAACATAGAGATCTGCTGTCAGAACCGACTTGAGAATACAGATCAATTGATTCCTTGCAGCCACTGTGATGTGTAAAAGGAACAGTTGAAAGAGACATGATGTCAGCTCATTACTTCTGCCCCACAGGCTGCAAACAGCCACAAATATGACAAGCCGGGTGAACAAGGGAGGGAGGAGGTCAGTAGTGACCTCATCCCCCCACAGCTACTCATTATTCTAATTATTCTGAGGACCACAGCCACTTCTCAGTGTGAGACCACAGGTCCTCTTACTTCAGAACGTCCTGGGGTGATTGTTAAAACTTTGCCTCCCAAACCTCCAGCCTAAGGACCCGTACTCCTGGGGTGGCTGTGACGCTGCAGCTTTAACAAGCTCCCCAGGCGGTGCTCATGCTGTCTTCATCCCCGGCCTACTGAACTACACACCCCTACCTTCGGGTCTCAGTAAATCCTCCACGCTGCACTGCCGTCCACGGTCGCCATCACAGCACAAGGACCAAGAACTTGGGTGAGGTCAGAGCCTGGCTTGGCCACATACTGGCACCAGAAAAGTGGAGCAAGGCTACCACCATCCTCACAGGACTAACCCGAAAGTTTAACCAAGGGATAAAAATGCTTCAAAGTTGACAACGGGGTGATCAGGGACAGAAGAGCACAGCCACGCGGGAGAGAAGCTTCCAGTTCTCACAGGAGGCAAGGGCGACACTCAACAGCAGTTCATGCTCTCAGGAACTTCGGGTTTTCAGTGCAAAGATAAAACAATCCTACTGACGGACCTGCTTGAAGAAGGCAGCCTCACTTCTCCTAATTCTTGACTGCTGTTGTAAGGGGTTCCTTTTCCCCAAACAGTGGGACTTGTGACCTGACTTAGTGTATGATACTTTCCTAGTATCCTTGGAAGTCGTTAAAACCTGTTACCCAATTAACAGCCATGCTCATAAATGCATATTTTCTTAATAGGAAAAGCACAGGGCTTCCTTCAACAACAATTATAGTATCAGTGGGTAACCTGTCTGGAGAGGCTTCCTATGATGCTGGACATCATTCTAAGCAGTTTTTTCTTGTTTTGCTACACCACTCTGCATGTGGGATCTTAGTTCCCCAACCAGGGATTGAACCCATGCCCCTTATATTTGAAGGGGGGGAATCTTAACTGCTGGACCACCCTGGAAGTCCTTTAAGTCCTTATCAAAAGTCAGTGCAGTGGGGACTATCTTACAGAAGACATAATGGAGGCACAGAGAGGTTAAATAAATTGCCAAAAGCCACACAGCTCACCTCGATCATCACCTCTGTGTCCAGAG TCONS_00194930 s 5' 86 TCONS_00194931 s 5' 0 EMBV3_24384 GGAGGTTGTTGATGAAGTCATACAGAACTGCCCCATCGACGTTCGTCGTCCGCTGTATAA Gene GeneID:616404|ACTR3B:XM_002686982:813_cdna Constitutive 0 NULL GeneID:616404 4 GENE ACTR3B NULL ARP3 actin-related protein 3 homolog B (yeast) EMBV3_25649 AAGCGTGCTTCATTACCTCTTCCATACAAGGCACCATAACAAAAGCAAATGAGTTACTGT Variant GeneID:514338|ZDHHC4:NM_001035292:173_cdna 451^629 1 EMBV3_43705 GeneID:514338 25 GENE ZDHHC4 NULL zinc finger, DHHC-type containing 4 EMBV3_25975 CCCCCAGCGCGCCCAGCTTCTGCGGATCAGGAGAAAATAATGAATGTCAAAGGAAAAGTG Variant GeneID:281780|GGTA1:NM_177511:24_cdna 251^461 6 EMBV3_39501 GeneID:281780 11 GENE GGTA1 NULL alpha-galactosyltransferase 1 (glycoprotein) EMBV3_05427 TCAGTGACTCTAACTCAGCCTCCAGCTCCGTCCATTTCTCCCCCATCCTAGATAGCACTT Gene GeneID:533203|MMP19:NM_001075983:1067_cdna Constitutive 0 NULL GeneID:533203 5 GENE MMP19 NULL matrix metallopeptidase 19 EMBV3_25022 TCGGAGGAGCCCACACCCAAGTCCAGCGCGCCCCGAGGCTTGATGGACAAAAGTAAATAA Gene GeneID:615880|SLITRK1:XM_002691909:30_cdna Constitutive 1 NULL GeneID:615880 12 GENE SLITRK1 NULL SLIT and NTRK-like family, member 1 EMBV3_20201 TTTCCTCCAAGGAGCTCAGGGTGCTTCCCAAACATTGCTGCTAAAGTGAACGGAAACCCC Gene GeneID:541080|FUBP3:NM_001101217:190_cdna UTR3_Alt 2 NULL GeneID:541080 11 GENE FUBP3 NULL far upstream element (FUSE) binding protein 3 EMBV3_22783 ACACCACCATCCTGCTGGCGGCCGAAGTGTTTTATGATGACGACCTAACTGATGCTGTGT Gene GeneID:509540|LOC509540:NM_001104969:114_cdna Constitutive 0 NULL GeneID:509540 25 GENE LOC509540 NULL hypothetical LOC509540 EMBV3_04616 TCCAAGCTTTTCAAGGTTTATTAGTGCATAGCTGTTCGCGGGGCTCCCAGAGCTCAAGAC Gene BVT0102_132703 + 0 NULL GK000009.2:64962933-65579317 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18037 GCAAAACAGGCGCTTTTGCAAAAGAAGGAGGATTAATGGGGTGAGTTCACTGGTGCAAAG Variant GeneID:522029|RPL7L1:XM_002697242:430_cdna 140^303 5 EMBV3_05718 GeneID:522029 23 GENE RPL7L1 NULL ribosomal protein L7-like 1 EMBV3_03597 GCACATCTGGTACTCTTAAAAACTATCCATGTCCATGTCCCCCTTGGAGAGCCTTAGTGT Gene BVT0101_053476 + 0 NULL GK000021.2:23523969-23546101 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17170 TTCTGCAAGTGCCACAGTTTCTGGTTTTACCCCCACCAGGTTGATTCCCAGGCAGGAAGT Gene GeneID:540688|PBX1:XM_002685833:60_cdna UTR3_Alt 2 NULL GeneID:540688 3 GENE PBX1 NULL pre-B-cell leukemia homeobox 1 EMBV3_03514 AAAGATGAAACAGGCTGGTGGTGGGAAGGCAACGAGCTCAGGACGGAACACGCTGAAGGA Gene BVV0102_211853 - 1 EMBV3_19729 GK000016.2:1878609-1964326 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068463 1 XLOC_041701 Coding TCONS_00068463 XLOC_041701 NonCoding Coding - 16:1929212-1934734 - TSS51259 379 1 TCONS_00068463_1 84 3 0.931896395580511 0.000287192081852677 0 0 0 0 0 0 1.56060553692384e-05 0 0 0 0 0 0 0 0 4.38056356746445e-05 0.000264811554483598 3.91425441029979e-05 0 0 0.000215375731468657 0 0 0 0 1.54594953910311e-05 0 0 0 0 noncoding 0 0 0 0 0.0586826077759476 0.635250929966997 -0.0197402247532057 0.806458300841451 GAGAAGTCAACCTGCTGGGTGCATCCTGGAACAGCATCGCCCATCCAGAGCGGACACTCCTCCTGTCCAGGTTTGCCCAAGGGCTGGGAGATGGATTCTACCCAGGAAGGAGCTGTGTATTTCATCAACGCAGAGCCTCTCCTGAGCGCCTCCTTCAGCGTGTTCCGTCCTGAGCTCGTTGCCTTCCCACCACCAGCCTGTTTCATCTTTGTCGGAAGTGCCAGCAGCGCAGAACCCTTGGGCCCCTCCTCCAGAGGTCCTGTCAGTTTTCCTTTTAAATATCCCTCAGCACCACCACTTCTCATCATCGCTGTGGCCACCACCGTCTGTGAACACAGACACTGAACACCACAGTTCAGTTCTTCGGCGCTCAGCTTTC TCONS_00068457 s 3' 1931 TCONS_00068457 s 5' 0 EMBV3_32382 TTATTTTTCCAGTAAGGCGGCTGACCGAGGGTGAAATAGTCTGGTCAGAACTTCCATCCC Gene GeneID:613971|PRP8:NM_001038200:140_cdna Constitutive 0 NULL GeneID:613971 23 GENE PRP8 NULL prolactin-related protein VIII EMBV3_07567 GAGCGGCTGCCCATCAAATTCGACAAGATACTAATGAACGAGGGCGGACACTACAACGCT Gene GeneID:539842|C1QTNF2:XM_002689351:56_cdna Constitutive 0 NULL GeneID:539842 7 GENE C1QTNF2 NULL C1q and tumor necrosis factor related protein 2 EMBV3_03404 AGAAACGATGGGGGAATGCTTTCTGTGAACGTGGGGGTTTAGCTGCTTCTCTTGCCTAAG Gene GeneID:280722|APP:NM_001076796:4_cdna Constitutive 0 NULL GeneID:280722 1 GENE APP NULL amyloid beta (A4) precursor protein EMBV3_32160 ATCCGGCAGCTGGTGGCCGAAGGCTGTGGTGTGCTGCTGACCACCCATTACCTGGAGGAA Gene GeneID:100299215|LOC100299215:XM_002683904:2_cdna Constitutive 0 NULL GeneID:100299215 Un GENE LOC100299215 NULL similar to ATP-binding cassette, sub-family A member 8 EMBV3_40417 GGAAAAGTGCCTTGTTTGCAGAGCTGTTTCTGAGCCGTTCATCACTCATGTTTCAGACGC Gene GeneID:767881|LOC767881:XM_002699579:55_cdna Constitutive 0 NULL GeneID:767881 X GENE LOC767881 NULL hypothetical protein LOC767881 EMBV3_01474 TGGAACTCTCCTGCTATAATGATGGATCAGCTTCTGGGATGCAGGGGAGCCCAACAACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09306 GGTCCTGAAAAGAGGAGGAAGACGAGCTGTCTTGGTACTAAAGGAGCTCTTGAGCGCATT Gene GeneID:100296275|LOC100296275:XM_002692800:102_cdna Constitutive 0 NULL GeneID:100296275 14 GENE LOC100296275 NULL hypothetical protein LOC100296275 EMBV3_16063 TGAGTTCACACCCAAGTCCTGTGTGCCTGAAATCGTGAGTTTTGTCCTTGGATTTACCTC Gene GeneID:507781|NEDD4:XM_002690890:24_cdna Constitutive 0 NULL GeneID:507781 10 GENE NEDD4 NULL neural precursor cell expressed, developmentally down-regulated 4 EMBV3_09134 GGCGGTGGAGGAGGTGAAGCTGGCCATCAAGCCGTATTATCAGAAAAAGGACATCACCAA Gene GeneID:785072|SCAF1:XM_002695209:922_cdna Constitutive 0 NULL GeneID:785072 18 GENE SCAF1 NULL SR-related CTD-associated factor 1 EMBV3_17555 AGATCTTGATATTTTCCTCAATGGTCTGGTATGCTCCCCCCAGAATGACACCTGCGAGCA Gene GeneID:100296890|LOC100296890:XM_002691832:531_cdna Constitutive 0 NULL GeneID:100296890 12 GENE LOC100296890 NULL hypothetical protein LOC100296890 EMBV3_05709 ACCTGGACTGAATCGTCTCCGTCACCATTTCCACCCAAGCTGGAGGAAGAGAAGCTGGAA Gene GeneID:100297270|LOC100297270:XM_002693126:556_cdna Constitutive 0 NULL GeneID:100297270 15 GENE LOC100297270 NULL hypothetical protein LOC100297270 EMBV3_10741 AAGATCAAGAGCCACAGGATCTCTTTGCAGCTAGAGGAAGAAGAACAGGAAGACCAATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27831 AAGGAATTTAGGAAGTGACGGCCTCGCCTAGCAAGCCCACAAGACACATTTCACGCCTAT Gene BVV0102_322009 - 1 EMBV3_35198 GK000018.2:58631955-58668780 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15194 CTGCATAATCTGATCCTCACACTGGTGTTTTAATCCAGAGCGTTGACATCATTGGTAAAG Gene BVV0101_001011 + 0 NULL GK000007.2:99845085-100424424 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15189 TAGAAGAGTCCTCAGACATTCTCCTCTGTCCAGCCCTCCACCTCAAGCATCAGTATAGAC Gene BVT0102_188367 + 0 NULL GK000011.2:74116894-74122694 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37105 GCTGAGCCACAGGGCAAAGAGTAAAGAGAGGACAGAGGGGACTGGAAGTGTTTGAAATCA Gene BVT0102_146614 + 0 NULL GK000007.2:5452287-5471572 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01934 AATGGGGTTCTCAGGGCAAAAAATACTGAAGTGGTCTGCCATTCCCTTCTCCAGTGGACC Gene BVT0102_155407 + 0 NULL GK000007.2:4447514-4459955 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10869 GGCCCTGAGGGTCCTGAATTCCTACTGGGTTGGTGAAGATTCTACGTACAAATTCTTTGA Gene GeneID:783834|RPL15:XM_002685469:157_cdna Constitutive 0 NULL GeneID:783834 2 GENE RPL15 NULL ribosomal protein L15 EMBV3_40972 CATCACAAGAAAACAGAACCCCAAATCAGGCCGGGGAGTACTCCATAAGACAAATGACCC Gene BVT0102_061292 + 0 NULL GK000021.2:25083943-25237607 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14800 GCTAGCAGCATCAGCATCTCTTTGTCGCTAATTTGCCCTGCAGCAATTCACCTGCCTTTC Gene GeneID:784937|MTCP1:XM_002699701:34_cdna Constitutive 0 NULL GeneID:784937 X GENE MTCP1 NULL mature T-cell proliferation 1 EMBV3_00406 AAGTTATTGCTTGTTCTGGACGCTGCATGGCCTTTGTTGACACCGGGACAGCATTCATCG Gene GeneID:517463|MGC157408:NM_001105381:2_cdna Constitutive 0 NULL GeneID:517463 29 GENE MGC157408 NULL pregnancy-associated glycoprotein EMBV3_37031 GCCTGTGAAGAAGAAAATTGTAGTTCCTAAAATTTTATCCTGAATCACATTAGGTGGACC Gene GeneID:507139|GCA:XM_002685376:298_cdna Constitutive 3 NULL GeneID:507139 2 GENE GCA NULL grancalcin, EF-hand calcium binding protein EMBV3_27908 AGTGACAAAAATTTTATTCCAGAATTGAAGAAACTAACGGCAAATCCCCAAACTCCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31292 GGTCTACATCAGTCTGGCCGCCCACCGCTCCTGGGTGCAGAGGATCGTGCAGGGAGTGCA Gene GeneID:510394|PRSS22:XM_002697927:580_cdna Constitutive 0 NULL GeneID:510394 25 GENE PRSS22 NULL protease, serine, 22 EMBV3_33481 CGCTTCTTCCTTAAAATGTTCCACTGGCGGGCAGATCCCCAAGGACAGTATCACCACGAA Gene GeneID:613489|DCTN4:XM_002689296:141_cdna Constitutive 0 NULL GeneID:613489 7 GENE DCTN4 NULL dynactin 4 (p62) EMBV3_08883 CTGAAATGCTAAGCAAGTAGTGTTAAGTACTCTCTAGTTGCCAGGGGGCTACTGCTGCAA Gene GeneID:614548|GADL1:NM_001102281:214_cdna Constitutive 2 NULL GeneID:614548 22 GENE GADL1 MGC157360 glutamate decarboxylase-like 1 EMBV3_05044 GCAGAGGATTAGATGTGGTTTCATGTGAGTGGTCCCACTGCCTAAGAGTAATTGGGGCAG Gene BVV0102_040274 + 0 NULL GK000021.2:1259156-1324229 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118487 TCONS_00250681 TCONS_00022895 TCONS_00040258 TCONS_00148960 TCONS_00250203 TCONS_00250903 TCONS_00133817 TCONS_00238581 TCONS_00210913 TCONS_00071631 TCONS_00174805 TCONS_00031759 TCONS_00174808 TCONS_00174809 TCONS_00171428 TCONS_00010280 TCONS_00174807 15 XLOC_072644 XLOC_153624 XLOC_013565 XLOC_024074 XLOC_090838 XLOC_153146 XLOC_153846 XLOC_081223 XLOC_145248 XLOC_129423 XLOC_043401 XLOC_104695 XLOC_018004 XLOC_103815 XLOC_005831 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_25999 TCCTGGGCGAATCTGGGGAGATGGACGCCCTGAAGATCCAGATGGAGGAGAAGTTCATGG Gene GeneID:282061|SCN5A:NM_174458:26_cdna Constitutive 0 NULL GeneID:282061 22 GENE SCN5A NULL sodium channel, voltage-gated, type V, alpha subunit EMBV3_41023 CCAACGGAGGACAAATGCCAAGAACTCATATGCAAGTGTGACCAGGAGTTTGCTCACTGC Gene GeneID:613966|PLA2G10:XM_002698005:114_cdna Constitutive 0 NULL GeneID:613966 25 GENE PLA2G10 NULL phospholipase A2, group X EMBV3_07613 TTCATTGAGAAGAAACGAAAAGTGGGGAAGGAGGAATAGCAGGGGAGGACGCAGACTTGG Gene GeneID:529410|POLR3F:NM_001038148:58_cdna Constitutive 1 NULL GeneID:529410 13 GENE POLR3F MGC134486 polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa EMBV3_35805 GGCCCAGTTCCTGGCCCACACATACTACTAAAAATGAGTTGGTGGGATTAGAGAAAGTGA Gene BVT0102_048871 + 0 NULL GK000030.2:143060693-143121244 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034472 TCONS_00233183 2 XLOC_020687 XLOC_142665 NonCoding TCONS_00034472 XLOC_020687 NonCoding NonCoding - 12:6364895-6366558 - TSS25460 1663 1 TCONS_00034472_1 48 0.506915213469633 1 0 8.34717351197335e-10 7.55294998933707e-07 0 0 1.3430468344736e-06 0 0 0 0 0.000411407190845502 0.000767496433422496 0.00016884960262657 0.000210214201268645 0.000191650917828039 0.00126996477062549 0.0135641318459335 0.00252741940803008 0.00766436854674063 0 3.60363795826903e-07 0 0.00424968258548582 0.00400432867505553 0.0054478244682385 0 0 0 0.000974975121570472 0.000467746776754344 0.0027204390629365 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 8e-68 262 85.84 0.137702946482261 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 1e-09 69.8 87.50 0.0330727600721588 0 noncoding 0 0 0 0 -0.0644343619631274 0.597147675601465 -0.0141406486926897 0.771811902889454 GAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAATGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAATAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCGTGCTCCTTGGAGAAAATCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAACCAAACGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTTGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACAGCTTTTGCTTTTTACCTTATTATCAGACAAGAAAAAACCTTGACTTCTCAGGCTAGGAGCCACAGAACATTTGGATTTAGTGATCTAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTTTAAAAGATCTTTTAATTCAAGAAAATAAAATGTCAGGGCTATTAGACACAAGAACAGACGTCTCTTAACATTGCTGGAAAAGACTGGCCCAGTTCCTGGCCCACACATACTACTAAAAATGAGTTGGTGGGATTAGAGAAAGTGATATGCGGGGTGAGAATGCTGTAGAAAAAAAAAAAAAAAAAAGGGTGAGGGAGAGTTTAAAACCTTGAAGAGTAGTGAGTTTCCTGTTGTTGGAAGTATTCAAGCAAAGATTAGATGGTTACTTGTCATCTAAAAAGCTATAGACCAGATTTGGTTTACAAAACTAACTGGAGAAGCTTATAAACATGTTGTGCAACACCTCTTTACTTGCTTCTCATATTTAGGTGTGCCAAAAGTTTTAAAAACTGATAATGCCCCTTTGAAGCTGTGGAGAGATTGTTTACTAACTTTAAATGATTTCCAAAAATTATTAGGGGACATTAATTGGATACGCCCTCATTTAAAACTGACTACTGCAGATTTAAAGCCTTTATTTGATTGCTTAAAAATTGATCCTAATTCCAGTTCTAAGAGAAAGTTGACTAATGAGACAGAGTTAGCTCTTGTTGAAGTGTATGAGACTTTAAATGGTCAGTTAATTAGGATTAATATTACCAAAAGATGAGATTAAATTATTCTTGCCACAAAACATACACCTACCGGGTGCTTATGACAAAAAGGCCCATTGGT TCONS_00036102 r 5' 1163746 TCONS_00036102 r 5' 1163746 EMBV3_32595 TTCAGCACAGGATCCGAAGTTTTGAAGAAGCCCGAGGTCTCGACCGGATTAATGAGCGGA Gene GeneID:533527|PPP3CC:NM_001098076:6_cdna Constitutive 0 NULL GeneID:533527 8 GENE PPP3CC MGC148791 protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform EMBV3_01481 CTACATACAGGCATAGATATGGACATCTTGAGCTCCTCTCTTCCTAGGAGAATGAGACGC Gene BVV0102_068601 + 0 NULL GK000001.2:146216698-146289038 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00326 CCCTGGCTGGGACCTCGGCTTTTCGACTCTTTGGTAGTTAAGCAGCAGTGTGCAATTTTT Gene GeneID:522998|LOC522998:XR_084663:6_cdna Constitutive 0 NULL GeneID:522998 28 PSEUDO LOC522998 NULL similar to coiled-coil domain containing 6 EMBV3_29448 TGAACTCCCTGTCCCCCAGCCGGCTCCAGAAGGACCAGCTCCCGGAGGAGTTTGTGGTGT Gene GeneID:616869|FRMD1:XM_002690396:22_cdna Constitutive 0 NULL GeneID:616869 9 GENE FRMD1 NULL FERM domain containing 1 EMBV3_41644 CGATGCCAGTAAGAACGAGGAGGATGAAGGGAAAATGTTTATAGGAGGCCTTAGCTGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14864 CCAGAGTTTCTCTCCAGTATGTGTTCTCTGACATTGAGTGAGGCGAGAGTGATTACAGCC Gene BVT0102_084470 + 0 NULL GK000018.2:57681798-57710212 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31062 TCGTCTGCAGCCAATCCAGAAGGAAATAATGCAGGAGCAAAACTTCACCATGGGGGACAC Gene GeneID:618946|IFNB3:NM_001114297:99_cdna Constitutive 0 NULL GeneID:618946 8 GENE IFNB3 NULL interferon, beta 3 EMBV3_24356 CACTTCACCACCAGGCTCAGAGGTTCAGGCTGGACAATTTGCTTAATATGGCCTATGGCG Gene GeneID:535408|ELAVL4:NM_001081606:91_cdna UTR3_Alt 3 NULL GeneID:535408 3 GENE ELAVL4 MGC140771 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) EMBV3_24905 CCTCGGCCACCCTCTTCTTTTGCCTTCAAACTTTCCCAGCTTCACAGTCTTTTCCAAGTC Gene BVV0102_058311 - 1 EMBV3_30033 GK000007.2:5796249-5800190 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211604 TCONS_00215282 TCONS_00215281 2 XLOC_129930 XLOC_130883 Coding TCONS_00211604 XLOC_129930 NonCoding NonCoding - 7:5796355-5799152 - TSS158964 2453 3 TCONS_00211604_3 58 0.379127598858541 2 0.123390557939914 3.62513271407908e-40 0 3.90664833676423e-126 7.59044066972736e-83 4.1695733877093e-34 0 1.62539726479233e-120 0 7.3878653159523e-05 6.54390693944518e-05 1.97788761870331e-262 1.72872262975685e-195 6.61725869950223e-09 6.77569207729451e-05 4.99567966750303e-05 0.000689092481647833 2.20625927512144e-05 0.000275775100814098 3.11257782105277e-05 0 0 3.33940575698648e-05 0.000370453321557238 4.95627696482065e-79 2.6703062352413e-120 3.88201870667385e-06 6.25564695901015e-05 7.04814822758932e-05 2.84359598512057e-05 7.35292871746086e-05 XM_005208521.1 OCEL1 PREDICTED: Bos taurus occludin/ELL domain containing 1 (OCEL1), 5e-130 470 100.00 0.10558499796168 0 noncoding 0 0 0 0 -0.0661764302640769 0.609901806356166 0.0278502917154006 0.675020834323345 GCGCAGCCCAGGATTGGCTCGCGTTAACCCCGGCGCGGCCCGCAATCTCTCCCGCAGGGCGAGGCGGAGTCCAGGGACAGCACCCCCGAGAAGACCGTTGGGATCTCCGGTCCGGTGGCGGCCCGCACGAACCACTCCTGCCTGGGGTCACCTGTCCCAGTGTTTGGGGCTCCGATTCTAGGTCCGCTCCCGAAGTCCGTGTGGTGCATTAACTACAGGCTGGAGTCCACTGTCTGGGTCGCTCCGCTTGCCAGGGGAGGGGCCTCGGTATATAGGGCGGGGCTGGCGGTGAGGGGGCGGGCCGGGGGAACCCGGAAGCGGACCCACACCCTGGCGGTGAGACTGACGGAGAAAGCTAGCTGCTGTGTATTTAGGGCCGGTAACTCACCCTTTCTGACCCTCAGTTTATTTGGAGAACTTTCGGCAGAGAATGAGATGGTTAGACAGCATCACCGACTCAATGGACAGAAGTCTGAGGAAACTCCGGGAGACAGTGGAGCCTGGCGTGGTGCAATCCATGGGGTCGCAAAGAGACCGACACGACTTATCGACTGAACAGCAGCACCGACTTATCTATTTACTTGAGTGAGTGAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCCACCAGGTTCCTCCATCCATGGAATTTTCTAGGCAAGAGTACTGGAGTGGGTTACCATTTCCTTCTCCAGCGGATCTTCCCGACCTGGGGATCGAACCCGTGTCTCCCGCATTGCGGGCAGACGCTTTACCGTCTGAGCCACCAGGGAATCGCATCTATTTACTTAGCGGTTATATTTTTAAAATAGTTCTTTAAATAAGCACTGGAGGCATGTTTAGAGAATTCACATAGAAAAGAAGCGTAGCGCAGAGTGAATTTCTTACCCACCCTTATTCCCAGAGGCCACGGTTAATTGTATCTCCTTTCGGAGAGATTCGAAGTCAATGACAAATCTTCCTTACTACGGACAATACTATAGAAAAAAGATTCAAGGGCACATTTCTTTGGCCAATTGTGCAGGCTTATGTAGGATGAATTCCTAGAAGTGAAACTTCCCAGAATCCACGGGGGAAAGACCTGTGTATTTTAATTTGGAGAGAGATTGTCAAACAGATTGAACTGACTTGGAAAAGACTGTGAAGCTGGGAAAGTTTGAAGGCAAAAGAAGAGGGTGGCCGAGGATGAGATGGTTACATAGCATCACCGACATAACTTTGAACAAACTCTGGTAGATCGTGGAGGACAGAGGAGCCTGGCGTGCTGAAGTCCATAGGGTCACAAAGAGCCGAACACAACTTAGCGACTGAACAGCATCAATTGTTAAGTTGTTTTTCAGTGAGCTTCTGCCAATAATGCTCTAATCAGCTGGTTTTCCCACAACCTTTGCAACCTCAATGGCATCACAGTTTCCTGTACATGTACTTTCAAAGTTTTAAATCTTGCCTAATCTGTTGCATTGACTAGCACCTCCAGACAATATTAAATCATTGGAGGAGATGGGTGGACTGTGAGTATCCCTCCACTCCAGCTCAGTTTAGTTTCTTCACTTTGACGGTAAAACTTCTAGTATTTGCCCATTAAACTCAACACTGCCTTTGGCTTGAGATTTTTCCGTTCAATGAGGAAATGCTCGTTATTTTTAATTGAGACTTTGTGTAATGGATGCTGTGAATAGTACCATTTCACTCTATGATTTTGCTTCCTGATGCATTAATACGGCTATTAACATGCTTCCTAATACTGAACCATCTCTGAGTCACAAGCAGGAGCCTCCTTCTTATGGTCTACTTTTAAAGAGTTGCCACTAGAGCTTTCATAAAGCTTTAAAAACTGCCACCAGAATTTTAAAAGGTATTAGTGGTGGTTTTACACCTATGCTGATGCAGTGGGGGTGGGGCCCACACGGACAACTCCATGCGTGTTCCACAGGCACCTTCTGTCCACCCTTCCTTTCCAAGCTTCTTCAGTCACTCCTCTCACAGACTTTGCTCTTGACATCTGGAGTGGGGATAAGCAGAACCCAGGACCCATAATTCCTCTGGACTCATACTCCATGATCCCTTCCAGGGTCCCAACTCCAACGCCCACCCAAACTATGACCTGGGCAGGCAGGGTCGCCACTGATTTTCTTGTGTTTGCTGAGTGACTGTGTGAAGCATCTGCAGTGTCCTGAGACTTTCGGCTGTGGCTGGGCTAAGCCTTGTCTCTAAATTACCACTTTCAATCCCAAGGAAAGCCCAGTACTGACACCCTGAGAGGGTAATAGGCAGGAAGGCTAGGGGTCCCCAGATGGAGGAAATAGGTTGCAAGTGTCAGACATTTTTTTTTTCTCTCTCTTAAGTGGCAGGAGGAAACAAACTACAAGTGTCAGACATTTTCCCCTTCTCTATGCAAAATTAAAAGGTTTCTTTAAAAATTTTGTGTTGCCAT TCONS_00215281 TCONS_00215281 r 5' 0 TCONS_00215281 TCONS_00215281 r 5' 0 EMBV3_28501 CCATGTCTTTATTAGTAAGGTACCACACATCATAGAGTAAAAATTCACATAGGACAGGCT Gene BVT0102_050414 - 1 EMBV3_15833 GK000008.2:100305230-100377460 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43505 GTTACCAGTATACACACCAGAATACACCGAGGAGATGGTACCCTGGCACCCCTGCTTGAA Gene GeneID:514867|TRMT11:NM_001080273:12_cdna Constitutive 0 NULL GeneID:514867 9 GENE TRMT11 MGC152203 tRNA methyltransferase 11 homolog (S. cerevisiae) EMBV3_07552 CCGGGTGAAGAAGGTCATGCGTTGTACTGTCGGTGCCATGTGGCCATCTTGAATCTGTTA Gene BVT0102_052247 + 0 NULL GK000006.2:8020933-8031524 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204396 TCONS_00204394 1 XLOC_124427 Coding TCONS_00204394 XLOC_124427 Coding Coding LOC100847143 6:8023544-8024590 = TSS152919 615 1 TCONS_00204394_1 61 3 0.414354066985646 0 9.21873930305235e-08 0 0.000148528133109012 4.68002363785701e-08 0 6.08681118652275e-05 0.000134541044131978 8.9797120018336e-05 0.0407657379544053 0.0242061441654121 0.010883994915682 0.00452666584567633 0.0102856302418395 0.00469164052427174 0.114520810831745 0.0459480006791908 0.134891550626555 0.000361460963670604 0 0 0.0409305317972216 0.039346879877662 0.0465719310034198 0.000256252013902382 0 0 0.0275092326247923 0.0161768502755452 0.0463983512043619 XR_138729.2 LOC100847143 PREDICTED: Bos taurus uncharacterized LOC100847143 (LOC100847143), 0.0 1097 100.00 0.986991869918699 NR_003584.3 SNHG8 Homo sapiens small nucleolar RNA host gene 8 (non-protein coding) (SNHG8), transcript variant 1, non-coding RNA. 3e-24 116 69.21 0.583739837398374 0 coding 0 0 0 0 0.124922329175506 0.293961984289822 0.545188452078513 0.00182012549527723 CCAGCCTTTTTCGTCCGGTAAGCGTCCGGTTTAGGCTAGGACGGTCGGTTGTGGTTGTTTTATGAGGTAAAGTAACAAGAAAGACGGCTTTTCGGCCTAGTTTAAGATGCAGGAGATGCAGCGGTCTTGTAGTAGTAGATCGACGTTAGCTTTGAAAACGTCTAGGTTCAGAAGCTTGAGTGAACTTCATGTTCGTTCGTTAGCGGGGCGGCCACGTGCAGCCCCGGGCGCTGAGTTGGAAGCCAGTCGCGCGTGGGTCGTGGGCCCTCCGGCAGAGGTTAAATACCGCTGATGACCCGGGTGAAGAAGGTCATGCGTTGTACTGTCGGTGCCATGTGGCCATCTTGAATCTGTTACTCTGCCACTCTGAAGAGTAACACCGCATCCTGACGAGCCGCCAGTTTGATCCAGGTGGAAGCTGAGCGAATTGTTCCAGTGGATGATGGAAAGCATAACGAGATACACCAAGAAATCCAAAGTGATGTGGGTGAAGTCTGAGCATCCTGCAGTACACTGCCAAATGTGATTTTAAATCTCGTGTATGGTATTTAAATAGAAAATAAAAGCGTGCTGCTTTTATTTATGTAATAAAATGCTTGATTTGTACATACAGTC EMBV3_39414 CGAGGGGAAAGATTCTAGCAAGGAGGGAGCCACACAGGGAAAAGGTGCAACAGGTAACTT Gene BVT0102_269027 + 1 EMBV3_18046 GK000011.2:46706153-46726810 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23609 GTCGACTACACCCTCATCACATTCAACTGGTTCCTGGTGGTGTTTGTGGATAGCGTCGTC Gene GeneID:535927|TBC1D2B:XM_002696662:275_cdna Constitutive 0 NULL GeneID:535927 21 GENE TBC1D2B NULL TBC1 domain family, member 2B EMBV3_31729 TCCACTGCCGATGACATCTCTTCCAGGCCATGTTGATGCTGAAGGGACTGGATTTCCATT Gene BVV0102_038620 + 0 NULL GK000007.2:99003795-99013510 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13787 GGTACTTACTGCCGTTCTTAGGCTTGTGCCATCGCTGTCTGCTACCTATCTTAGGGTTTG Gene GeneID:541051|TBC1D30:XM_002687545:540_cdna UTR3_Alt 2 NULL GeneID:541051 5 GENE TBC1D30 NULL TBC1 domain family, member 30 EMBV3_33701 GCCAGAATGCTCTGCGTGTGGAGGTGAAGAAATGCGCAGTCAGCAAGTGACATGTAAGCA Gene BVT0102_025020 + 0 NULL GK000014.2:15186577-15258824 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052761 1 XLOC_031575 Coding TCONS_00052761 XLOC_031575 Coding Coding LOC100336786 14:15192880-15447750 x TSS39090 1235 2 TCONS_00052761_5 72 0.204858299595142 4 0.9951700677603 5.77492657242555e-06 5.67393157424765e-05 0.000321161494905871 1.87213263545301e-05 2.7852180092408e-05 1.56928294764976e-125 1.75881542244559e-05 1.55258192822806e-05 1.7254300813757e-143 1.33262585528345e-05 0 3.34844726662189e-05 1.99644750783118e-11 3.4280135532766e-05 0 0.00105395486640204 1.12464274900198e-05 0.000171234745416054 1.48006481549623e-05 1.3049094109988e-58 8.85071991326795e-07 6.51458407157671e-05 0.000107673264566638 2.57152589315571e-05 3.18829672393518e-06 8.40608560259693e-06 1.63139135840848e-05 1.2472104010062e-05 5.87458728405448e-05 7.04497064580561e-06 XR_227699.1 LOC101908491 PREDICTED: Bos taurus uncharacterized LOC101908491 (LOC101908491), 3e-147 526 100.00 0.234817813765182 XM_005272435.1 ADAMTSL3 PREDICTED: Homo sapiens ADAMTS-like 3 (ADAMTSL3), transcript 3e-21 107 69.96 0.187044534412955 TCONS_00052761_5 sp|P82987|ATL3_HUMAN ATL3_HUMAN ADAMTS-like protein 3; 4e-14 68.6 62.96 0.736111111111111 0 noncoding 0 0 0 0 -0.0112226717989491 0.922998733033332 -0.0254914479085213 0.746353068116643 ACAGAGGAACCTGGCAGACTATAGTCCATGGGGCTGCAAAGAGTCGGACACAACTTGGCGTCTAAACAACAACAACAACAGGTGATGCTGGCCATCTTGTTGTCTTTGAGACAGACGCACTCAGGCTAAAGACATTTCCTTGGATGTTTGATGTTTAATCAGTTGTGGGCCCTTATGGAGGGTTTCCCCACCCACTTCCTCATCCGGGTCTTTTGGCTTGGGCCTATTGATGCTACTTGGGCCCACTTGGACAGTTTCCTCACCCCGCTCAGCTTCATCTATTGGTACTAACCGTCCTGAACAGGGACCCTCAGAGACCTGTCAGAGTGGACAAAGGCCTCTGGAGCCCTTCCCAAGAACCTTCTTGCTTGGAAGATTAGCAGTTTCTTCTCAAGCATCGCTCTCAACTTGCTAAACACCTTGAAATAGTTCCAGCAAGACGTGTCTCCCTCAGATCCCAGGGCAGAACTGAGAGACAGTAATGAAGAAATGAGAAGAAAGGGGAAGGATCCTTGTATACTGGGCCAGTTCCTAGGATCCCAGAATCCTTGCTACAGAATCCAGGTGAAGAGAAGAAAAAAGAAAAAAAAAAAAAAGTCAGTGACTCTGTTGATATAGAAAACAAAGAGCTAAGAGCTGAGAAGAAAAACAGAAAGAGCCTGATTGTCTTAGAATCTTGTAGACCATTTTGTGACTGCGCCAGGAGGTGGCTCGCGGGCGAGCGGCCAGAATGCTCTGCGTGTGGAGGTGAAGAAATGCGCAGTCAGCAAGTGACATGTAAGCACACAAGAGCCCACAGAACGGTGCAGCTGATGCCTCTGAGAGGGTGTGCCCCCAGAGCGTGCGCCCCCAGAGCCAGGCCTCTGGGAAGAAGACCCTGTTCCAGTCACCCCTGTGTTCAGTGGCTCCTTGAACCAGGGAACCAGGGAACGCTGACAGATCTAATATTTTTGATAGTCAGCCAGTCCCTGTAGTCAAACCCACACAGTAAAAAAAAATTAAGATAAAAGAGGGACTTCCCTGGTGGTCCAGTAGTTAAGACTTCACCCTCCAGCACAGGGGGTTGCAGGTTCAACCTGGTTGGGGAGCAAAGATTCCACAAGCTTCCAGGTCGAAAAACCAGAATATAAAACAGAAGCAATATTGTAACGAGTTTAATAGACTTTAAAAATGATCCACATCAGAAAATTTTTAAACATCTCACACATCAGGGCCCTTCCCCATGGGAGAAGGAG TCONS_00051375 TCONS_00051376 r 3' 7659 TCONS_00051375 TCONS_00051376 r 3' 8427 EMBV3_21442 CCGTTTTAACCGTCTAAGCAGGGGTTGTGTTACCTGATGAGCCTGAGATTCTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_20279 TCTGGTTTCTGCCATCGAGTACAGCCAAATAATTCATCTTTTTTGAGTCTCCGTGTCTCC Gene BVV0102_459773 + 1 EMBV3_10142 GK000020.2:8369977-8419595 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00427 TTAGTCGCTAAGTTGTATCCAACTCTTGTGACCCATGGACAGTAGCCTGCCAGTCTCCTG Gene BVV0102_408548 - 1 EMBV3_33303 GK000019.2:41123268-41141794 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08461 ATAAGGAGCACGTCTTCAAGCTCCAGTTCAAGTCCCACGTCTACTTCTTCCGGGCTGAGA Gene GeneID:514637|LOC514637:XR_084684:156_cdna Constitutive 0 NULL GeneID:514637 3 PSEUDO LOC514637 NULL similar to FERM, RhoGEF and pleckstrin domain protein 2 EMBV3_08720 GGAGCAAGTGTGTAACCCAATCATCACAAAACTCTATCAGGGAGGATGCACTGGGCCTTC Gene GeneID:540190|HSPA1L:NM_001167895:186_cdna Constitutive 0 NULL GeneID:540190 23 GENE HSPA1L NULL heat shock 70kDa protein 1-like EMBV3_21195 AGTGTTTCAGCCTTTTGTGGGATACTCTTTTAATCAGTGTGCAGTGGTTGGAAACGGGGG Gene GeneID:494116|ST8SIA6:NM_001103227:70_cdna UTR3_Alt 2 NULL GeneID:494116 13 GENE ST8SIA6 MGC148307 SIAT8F ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 EMBV3_39039 CTCCTCATATTCGGAATACCATTCATTGGTAGGTGAGAACTGAAGATTACATGGAACTAG Gene GeneID:509283|RNF213:XM_002696144:302_cdna Constitutive 2 NULL GeneID:509283 19 GENE RNF213 NULL similar to mCG142721 EMBV3_38825 CAGCCATTTCTTCCCCACCAAGGCGTCCGTGTTTGCGGGCTCCAACAGGCATTTCAGTGT Gene GeneID:528048|ACTL8:XM_002685796:681_cdna Constitutive 0 NULL GeneID:528048 2 GENE ACTL8 NULL actin-like 8 EMBV3_25894 ACTCGGACTCGGTCTCGGATTCGTAGTCGAACTCTTCTTCCTGGTACTCTGGGCACTCGG Gene GeneID:100295808|LOC100295808:XM_002692266:1588_cdna Constitutive 0 NULL GeneID:100295808 13 GENE LOC100295808 NULL hypothetical protein LOC100295808 EMBV3_23596 AAAAGGGAAATGGCCCCAACGCCACTCACGGCGGCAAATGGTTACTAGAGAAGACCTGAG Gene BVT0102_266584 + 1 EMBV3_25499 GK000007.2:1451226-1452958 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211405 TCONS_00211406 TCONS_00211404 TCONS_00211403 1 XLOC_129863 Coding TCONS_00211403 XLOC_129863 Coding Coding MAML1 7:1422319-1452635 = TSS158866 3490 1 TCONS_00211403_4 576 6 0.885073396008577 0.00247848621666988 0.00134193122540301 0.00158881057080792 0.000648283471702014 4.67296686521489e-08 0.000195997824753538 0.000860138717051749 0.000691542279544415 0.00155841398629625 3.4213806434587e-05 1.78570241369622e-05 2.38363872130613e-11 1.55519618992134e-10 0.000584965238982989 3.7467582083148e-05 0.000252450989484338 0.000128431407601481 0.0003813621478552 0.00134316736704273 0.00196511553530369 0.00109625513796986 1.38915453009538e-05 0.000162719987833235 0.000148505196374531 0.0024269816948089 0.00294871547548074 0.00134443344866768 4.66465447374858e-05 0.000119614810894031 0.000130898314663752 XM_002688497.2 MAML1 PREDICTED: Bos taurus mastermind-like 1 (Drosophila) (MAML1), mRNA. 0.0 4273 100.00 0.678510028653295 NM_014757.4 MAML1 Homo sapiens mastermind-like 1 (Drosophila) (MAML1), mRNA. 0.0 2605 77.54 0.92865329512894 TCONS_00211403_4 sp|Q92585|MAML1_HUMAN MAML1_HUMAN Mastermind-like protein 1; 0.0 766 86.17 0.861111111111111 0 coding 0 0 0 0 -0.185609724921455 0.158525074017784 0.0528154681130738 0.309992583170031 ATGGTGAGCCGGAGTCCTGGCAACTTCCTCAGAACTTTGGGGAGGGGAACTCGGAATGGGAGCGAGATTCCTGAGGGCAACTTCCAGCCTCTCGTCATCCTGAGGAAGACAGAGCCAACCCAGGGTTGGTTTGAAGTGGGTTTTGGTCAGTGGCAACAGAGTCCAGACTGGCAAGCGAGCACGAGCCATGCTGTGGGAGGGACCGAGCAGCTGGATTCTGGGGCCGCCTTTGCTGCACTGGCTGACTACAAAGCAGACTGTGGACAAGGCGGCCCTGGGGCTGGCCAGAGCAAGCCGGCCCTGATGGCTTATCTTCCCCAGCAGCTGCCTCATCTTAGCAGTGAGCAGAGCTCCTTATTTCTGATAAAACCAAAGCCAGGAAATATGCCCTTCCGATCACTGGTTGCACCTAGCCAGGACCAGAACCCTCCCAATGTCCCTGTACCAACCCAGGCTGCCAGTGTGGGGACTCAGCCGCCTGCTGTTTCCGTGGCCAGCACGCACAGTAGCACCTATCTCAGTAACCAGCAGCAGGCAGCAGTAATGAAGCAGCATCAATTGCTTTTGGACCAACAGAAACAGAGGGAGCAGCAACAAAAACATTTGCAGCAACAACAGTTTTTGCAAAGGCAACAGCACCTTCTGGCAGAACAGGAGAAGCAGCAGTTTCAACGCCATCTGACCCGACCGCCCCCCCAGTATCAAGACCCAACACAGAGCACCTTCCCACAACAGGTTGGACAGTTCACAGGGTCCTCTTCTGCCATGCCTGGCGTGAACAGCTTGGGTCCATCTAACTCCAGCTGTCCCCGAGTGTTCCCTCAGGCTGGGAATCTGATGCCAATGGGCCCTGGACACACTTCAGTTTCTTCTCTTCCCTCAAACTCAGGCCAGCAGGACCGGGGTGTGGCTCAGTTCACTGGCTCCCAAAGCATGCCACAGAGCAGCCTCTACGGCATGACTTCCAGCATAACCCAGATGGTTCCCCAGCCTCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAGCGTGGGCCAGAACACCTCGGTTTCAGCTGCCTATGGACAGAACTCGCTGGGGAACTCTGGTCTCTCCCAGCAGCACAGTAAGGGGACCCTGAACTCGGGTTTAACTAAGCCACAGGTCCCCAGGGTATCAGCAGCCATGGGAGGCCAGAATTCCACGTGGCAACATCAGGGAATGCCGAACCTGAGCGGCCAGCCCCCGGGAAACAGCGCCGTAAGCCCGTTCACTGCAGCCTCCAGTTTCCACCTGCAGCAGGCCCACCTGAAAATGTCCAGCCCGCAGTTCTCTCAGGCGATGCCCAGCAGGCCCATGGCCCCCATGAGCTCAGCAGCTGTGGCAGGGTCCATGCTGCCCACTGTGAGCACACAGCAGAGGACCAGTGCCCCTGTGCCAGCACCTCCCCAGGGAGCCCCGCAGCAGGGCTTGTCGGGCCTGAGCCCGGCGGGGCCTGAGCTGGGGGCCTTCAGCCAGAGCCCTGCCCCAGCCATGGGCGGCCGGCCAGGCCTGCACTGTGCCCAGGCCTACCCCGTGCGGACCGCAGGCCAGGAGCTGCCCTTTGCCTACAGTGGGCAGCCGGGCAGCGGCGGGCTGGCCAGCATGGCTGGGGACGCCGACCTGATCGACTCCCTGCTGAAGAACAGGACTTCCGAGGAGTGGATGAGCGATCTGGACGACCTCCTCGGGCCTCAGTAGCAGGAGGATTTGTGGTATTTTCAGTGTTCACACAGCCTGTAGTTTTGTTCTCAGATTCAAGAAAGAGTAACTGCTTTGGACCAAATCCCACAGCCCAGGGAGCCGGGCAGGCAGAGCTAGAGCCGCAGAGCCGAGGCCTGGTCCTCCCGGGACCGTGGGGCCCACGGCTCCCAGCCAGCAGTTGGGATGTCGGGCTGGCCCCCCCATCTGCTGGTGTCACTGTATGGGGTTGGGACAGCAGGACTGGGTTCTACGGGGGTTTTTTCTATCCATAAGACCAAAAAGCCAACCGTAAAACCCCACGATGCCAGCTTTATAAAAATCTGTGCTATCATTTTGATCTAATCCAAGATTTCTCCACTTGGCCCAGTGTTGGGACAGATTTTTGTTGAAACTTTATAGTGGAACTATTTGCAATTTGTAGCATAGAAAAGATTTTTTAAAGGTTTTAAGGTTTTAAAAGAGGTTAGGGTAGGTGGTTAAAATCTATAAGTGGCATTGGAAACTTAGGGTTTCCTTTTGATTAAGAGCCTTTTTTATTCCTGCTCTTTGTCAGCTTTCAGGACAAAGAGAGGCTCACTGGAAAATTGCATGTGCCAAAAAGGAACAGGATGCCGTGAGAAGCAGAGCTAGTGGCAGAGATACAGTCGTTACTGCAGCCCCGCGTTCTCCCAGAATGCTGTTCTTCCAGGTTGGCATTTAGGAAGAGTTGGGCTGAGGAATCCCTTCCTCCAATGTTTTCAGAGCAGGACCCCAGGCTAAAGGCTGAAATACAAACTGGGGTTCCTGTGTCTCTTTTGTTGTGACTCCTCACCTTTTGCAGTTTCTCTGGAGACTCGTATTTAATGTATTAGGAAGGTGATCATTGTTGAGTTGTGCACAGATGTCTTTTCTTTCACCCTATCTTCATTTCCCATAACCGTTCTTTCTGCCTCCTGTTCTTTATATCTCCAGCCCAAGTGGAAAACCTCCTTATGGCACTAATTTACTAGATTGGAGAGGAAAAGAGTCATTAGAATTCCCCAGGGAACCCTAGCGCTGTAAGGAGGCGGGTGTCCCCTCCCCAGAAAGCAGAGGTTCAGGGGAAGGAGGGAAAAGGACACAGGCCAGAGGAAGGGCCCCCGCTCCACTCTGCTCCCGCTGCCGCTGCCTCTTCAGACGACTTGCACTTTCTAGAGAGAATTGCTGTGTAACACTAACACGTCCTTGCTAAAAACTCAAGTGGATTTCTCTTTTAAGGTCTGTGACTGTCTAGGTCTTGACTAAGCTAAGAGTCCACATAGTATTACCTGTGGGCTGTTTGTGGAAAGTGAAGACGGAGAGAGCACTTCAATATAGCAAAAGCAAAATGGTAAGCATAGGGTGGAACTCTTTCAAATGGAATATTGGAGGGAAAATAGTACACTGAAAAGAGTGGCTTATATGCAGAATGATCTCTGGCAAAATCACCACCCCATTTTTATTTCCCTGGAGTTTCAAAATGGATAATTCAAGGAGTATCATACGTAAAGAATTGAGCCAGGAAAAATGCTCACACAGCCAGCTTGAGTGGCTTTGAGGGGATGAAGGGTTGTGCACACATTGGTCGTTACTTTGCACCAGCAGTGCCTTTCATGGGGGTGCTTGGACCCTCAGGTCTTCTCTAGTAGCCATTTGCCGCCGTGAGTGGCGTTGGGGCCATTTCCCTTTTATCTCCCTCGCAGCCTTCCCCGGAGGCTGAATATAGCTCAGAGAAAGGGATGCATCATAAAGCCAGTNN EMBV3_36417 GCTCTGTACATGAGAGATGGCCAGTTCCTGGTGGGAGATCCCAATGCAGACAACTGTCAT Gene GeneID:615702|IL1F10:XM_002691398:338_cdna Constitutive 0 NULL GeneID:615702 11 GENE IL1F10 NULL interleukin 1 family, member 10 (theta) EMBV3_10581 CCCTCTAGCTGGACTGTGGGCTCCAAATTACTCACAGAGAAAAACCAGAGACAGAGGAAG Gene GeneID:533087|EZH1:NM_001102151:163_cdna UTR3_Alt 2 NULL GeneID:533087 19 GENE EZH1 MGC157156 enhancer of zeste homolog 1 (Drosophila) EMBV3_15220 ATGGTCTGGAATCCTGTTCTGAATGCTGACAAAGCCCAGCAGGGCCACTCCAGTCTGTCT Gene BVV0102_199775 - 1 EMBV3_38962 GK000023.2:12040965-12046516 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134098 TCONS_00134091 TCONS_00134094 TCONS_00134090 TCONS_00134092 TCONS_00134099 TCONS_00134097 TCONS_00134096 TCONS_00134093 TCONS_00134100 TCONS_00134095 1 XLOC_081297 Coding TCONS_00134090 XLOC_081297 Coding Coding BTBD9 23:12043929-12125271 j TSS100032 3561 2 TCONS_00134090_1 101 4 0.956270515484196 2.05453803817211e-16 0.00029456077289829 5.3881784505539e-06 2.24655342758987e-09 9.88981816109112e-08 0.000670060943725366 0.00098472954784389 0.001128228547372 0.00169380610141652 4.00855855903664e-11 6.38072592138424e-20 2.88823434717793e-14 2.07677900399304e-06 2.56045919679554e-23 2.51367938289111e-16 8.79410453802691e-09 4.66225709934428e-06 1.20250748514518e-09 0.00136088522237179 0.000557023890254439 1.42380876632116e-88 1.09415160357357e-12 3.2156820503586e-08 4.75530415390525e-07 0.00200657019905335 6.15271834437467e-07 0.000784200858265587 1.26303689364106e-11 3.06277791333204e-17 1.96668396105354e-14 NM_001128498.1 BTBD9 Bos taurus BTB (POZ) domain containing 9 (BTBD9), mRNA. 0.0 1647 99.89 0.256950294860994 NM_001099272.1 BTBD9 Homo sapiens BTB (POZ) domain containing 9 (BTBD9), transcript 0.0 984 78.38 0.341196293176074 TCONS_00134090_1 sp|A4IFG2|BTBD9_BOVIN BTBD9_BOVIN BTB/POZ domain-containing protein 9; 2e-55 184 100.00 0.99009900990099 0 noncoding 0 0 0 0 0.052794541721555 0.686613711837823 0.0342713972521742 0.513798289253963 CAGGAAGTCTGGAATGTGAAGGAATCTGAAACATAATTAAGGTCATTGGGACATGCTAGTTATTGCTGTGGGACTGTGACGACCGGAGCTACAGCTACTATGTTGAGGTTTCCACCAACCAGCAGCAGTGGACCATGGTGGCCGACAGAACCAAAGTCTCCTGCAAGTCCTGGCAGTCGGTAACTTTTGAAAGACGCCCAGCATCCTTCATCCGAATCGTTGGAACACACAACACAGCAAACGAGGTATTCCACTGCGTCCACTTTGAGTGTCCCGAGCAGCAGAGTGCCCAGAAGGACAGCAGCGACGAGCCTGGGACAGGGGGCGCCAGCGCGGCCGGGCAGCAGCTCGACCCCCACGCCCTGCAGGCCCCCAGCGGCAGCTCCCTGCCCTCCAGCCCTGGCTCCAACTCACGCTCACCCAACCGGCAGCACCAATAAAGGAGGCGCACGTGTGGAGTGACTCGGGTGGCCAGGTGGCGCGGGAGCCGTGTCCCCCGCCCGAGCAGGGATCCCTGTGGACTCCCCCCACACCCTCCCCCTGGAGGAGCAGGCCTGGCTGCAGAAAGGGACACAGAACGGGTTTCCTCCCAAGGACACAAAGGGGCTGCTCTATTCTCCTCAATTTGTTCAAATCAGGCTGGTCTCCAGAGGGAGAGAGTGGGTCTTCAATCTTCATCAAGTCCTCCATTAACACCCTACCTCTCTAACCTGCAAGGGGCACAGAAGGAAGTAGTAGGCAGGCCCGGGTCCGCATACAGAAACGGCACGCAGACACGGGCCGCGCGGGCGTGTCGGGCCTTCCCCCAGAGGCGCCCTGAGAAAGGAGACTTCAGTGTGTTTACTTTTATGGACATTGCCCTGGCAACTAAATGGTTTTTTATTTCTTTTAGTTACTCTCCATTTGCTGAATCATAGGTATTCCAGATCTTTTTGAAAGGCTCAAACCACAAATCACTTGTTTCAATCCCTTTTGATGCTGTAATTTTCCTTCTTTAGTTTTGAACGGTGGAGTGTGGGGTAGAGCGGAAAAATAGCGTGCACGTCTCCCTAGGGAGGGATGGAGGCAGGGCTTCGTGGTCTGACAAGGAAAATCCTTTGAGGAAGTTCAACAAAATACACAATGAACAAATCAATCTGCGGACACTGGAGTTAATAATCACTCAAAGTGCCAGGTTATTAACCTGTCATTCCTGAAATGTATCCCACCTTTAAGCTTGGGAGGCTGACAAGGAAACAGTGACTATGCCACCAGCTAATTGAATGCTCAGAAGTGTGCACAGATAAACCCGCCCCAGCTAATGTAAGGCTCACAAGTGTGCACAGATAAGCCTGCCCCAGCTTCTGGCTAGGCTGGGCCCGCCCTGTTTGCCACAGGTTAGTGGAGGTGTGTGGAGACGGCCATCCTGCTGGTCAGGGTCTGGAATACAAGAGGGGCCTCTCCCGCCCGCTGGTGATCAGTGGTTGCTGCTTTTCCCCCAGACCATAATACTCAGCTAGGGATTGGGGGGATGGGGGGGGACAGTTCTAAGCAGCTTTCCTCTTAATCCTCACCGAGACCATCTAATCTGACAGTTGTCACTTGATCTGGCCTGCGTGTCTGAGTGATGTCCGCCCAGCGCTAACCGCCCTCTGAGAACCCCTCCCCAGCTTCTCCCGGTGGCTGGCTGCGGCCATCAGGCCCTCCGCGCACCCTGCCTAAGGCAGGGTGGGCACTTTCTTTCTGTCTTAAGCACACATTGGTCATAGGTGTGCAAAGAGCCAGTGGGTCAGCTCTTTCCTCCCAGTGTTACATAGATGTGAGTGGCTTATCGGTCCCGGGGTAGTGTCGCTTCAAGCTGCATGAATAAACCAGATGGTTGTCTTTCTGCGGGTCCCCCTCAGTGCCCTTCACTCTGATCTCTGTCTGTATCCCCCCGTGTGGGGTGAGTGGAACCCCTGGGTTGAGGGGCAGCTTTTCACCGTAGGAGGAGGGCTCTGGTAACAAATGGAGCCTCTTGCTTGCTCACCGTGGGTGGGTGACCACCTCCCTCAGCGTCCAGCCCCCGGTTGCCAATTAGAGCCTGGCATTCTTGTCCACTCAGCACCTCCTCAGGCGGCGCATTCACTGCTGACAGGGAAACAGGAGGAGCAGGGGACTCGGGCTCGGGCAAGGTTCAAATCCTTTGCAGGTAGCACCGGTTCACGGGCTTAATCACGGAGTCACCTGTCCAGAGAGGCGTCCCAGCCTGGAGGCCGGCACTGCTGACCTGGGGAAGGTCCAGAGCCTTCCAAGCCGTGGCCCTGCAGCATCCCTCTGCGTCCAAGCACTGGGGACGAATGCCACCTGGCTACTCAGCTGCCAACAGGGAGGCACGAACCGTGCCTGGCTGGCCAGCGGCTCAGCCCTTCTCTCGTCCCCGGTGAATTCTCTCCACCCTGAAGTCTGTCTGGAGAACAGAACTGTCTCCCTGCTTCTGCAGCACTTCACTCGCCCTTGTTATCACGTAAAGGGAAGGAAGGGACGGTGATGCCACCCCTCCCCGGCAGCTGCCTCCCGGGCCCGATGGTCTGGAATCCTGTTCTGAATGCTGACAAAGCCCAGCAGGGCCACTCCAGTCTGTCTCCTGCTACGAGGCAGGGGCTCCGCCTTCCCTGATGAGCCTTCTGGTTTGGGGAATGGGGGGCAGTCAACAAGTCCGTAGGGGACTGATATCTCCAGAGCCCTGGCCAGTCCTACAGAGGAGTCCCCCCACCCCCGACCCCGCCGGGAACCACATGGACCAAAATGGCCCCCAAACTCCGAGAAACCAAAGGAGCCGAGAGAGAGTGCAGGGGCTGAGACCCGGCTCCAGGGAACCCCACCAGACCCCTCCGCCCAGCAGCGGGTAGAGGCCGAGTCCCTGGGGAGCTGTGGGCACCAGGCTGCGGGTTTGGCCAGGCTGGGAGGGGGGCAGCGGCAGAGGAGGGCCGGTGGCTCCCCACACCCCGTGAGGAGGCAGCTGCATGGAGGGGGGTTGAGGAGGTTGGGGCAGAGGGACAGAGGGGTGCTTACACCACCTTTGTAACCAGGTCACGAGATAGAACAAGCGGAGCCTTTTGCCCTTCACTTTAGATAAAGCTCTGTGCAGAGTAAGAGGCAGACTCCTTTGGGGGAAAGCGTTCAGTCACCTCCTGGAGCTCCTTGGAGGGCTGGCTCTGAGCACGGCGGGCGGGGCACGTGCCACATGAGCCCCATTCAAGGCCAGCTCAGGTAAGGCCGGGTGCCAGGCACTCAGAACTTGAAACACACACACTTGTCTTCCCGTATTCTGTTTTTTTCCGATGCTCTTCTGATTTTAGTTAGAGCCATGAGCCCGTGATGGATATGGGACTCTTCTCAATTGCTCTTTAAATTATCACTTTTTAAATCTTAGTAAATAAAGTGTGTTTATTCCTGACAAATACATTAAAAGTGTGTTATCCCTAGAAGAGTTAGGAAAAAGAGAATTATTTTCAGCGAGAGTGGGATGTGTTTGTTAGACGGCGTCCTTGGCCAAGAAGAAAGAGCTTCTGAATTGTGCAAAAACTGCTCAGGAGTTAC EMBV3_37974 CAGGAGAGCGACAGCAGCTTTCTGGTCAAGACCGACACCACGGCACACCCATGCTGCTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17081 CGGGGGAAATGGCGGCGACGGCGGCAGCGGCGAACTGCTGTCCCACACCGTGGAAGAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27640 GATGTTGTGTCCTCTTGTGTGCATGACCTTCCTTTTACATCCTCAACACCATACGTTCCC Gene GeneID:514368|ATP6V1G2:NM_001075664:120_cdna Constitutive 0 NULL GeneID:514368 23 GENE ATP6V1G2 MGC136989 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2 EMBV3_07788 TCCAGGAGCTTTGCATCCCCCAAGACCTGGTTGTGGACTTGGCCAGCGTGGTGTTTGGTA Gene GeneID:504807|COMMD5:NM_001014850:35_cdna Constitutive 1 NULL GeneID:504807 14 GENE COMMD5 NULL COMM domain containing 5 EMBV3_20873 TCCACGGTCCCTACCTTTGTTCTGTCCATCACAGCTACAACACAGGCTTTGGCACTGATA Gene GeneID:505511|AHCYL1:NM_001101052:59_cdna UTR3_Alt 2 NULL GeneID:505511 3 GENE AHCYL1 NULL adenosylhomocysteinase-like 1 EMBV3_07224 CACACCAGCGCTTAACCACCTGCCTCCAAACCTGTCTCACAATGAACCCCTGATCTCTTT Gene BVV0102_073096 + 0 NULL GK000022.2:58253055-58263714 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02107 GGAATTAAGGGAAAGCAACGTCAGCTAAGAAAAACCCTTCGATGTCCCGCTCTAAGCCCC Gene BVV0102_153589 + 0 NULL GK000016.2:2029970-2066066 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068479 1 XLOC_041704 NonCoding TCONS_00068479 XLOC_041704 NonCoding NonCoding - 16:2059046-2064164 - TSS51270 642 1 TCONS_00068479_1 67 0.0965732087227414 2 0.874926714871995 0.00129275324465405 0.000485204131424901 0.00184503389531924 0.000219892463679996 0.00198410333528791 0.00109206327677292 9.08366146698153e-06 1.84259171668314e-05 0.000344118013115827 0 0 0 8.0447026005372e-05 0 1.52841315703436e-05 0 0 0 7.81877138584765e-05 0.000112016167014681 0.000420841031209132 0 0 0 0.000377719971962092 0.000625533076866804 0.001268569431011 0 0 0 XR_238481.1 LOC101903564 PREDICTED: Bos taurus uncharacterized LOC101903564 (LOC101903564), 2e-14 84.2 93.10 0.088785046728972 0 noncoding 0 0 0 0 -0.119210887122037 0.595938440180928 -0.0341758303432496 0.548253251546734 CTCCACAACTAGAGAAAAAGCCTGAACAGCAGTGAAGACCCAGCACAGCCAAAAATAAGACAAATTCCTCAGAGTGGAATTGCTGGACCAGGGCAATCACTTAAAGCAGTTGGAATTAAGGGAAAGCAACGTCAGCTAAGAAAAACCCTTCGATGTCCCGCTCTAAGCCCCACGGAGGGTTAATTCTCCACGTCAGCCCTGTGGCAGAGGGCAGCGCTCAGAGTACTGGCGGCTGTGGAAAAGAAGAGCCTCCGATGCCAAGATCGAGAAAATGTCTCACCGCTGGCATGTTCAGCTTTCCACTCTGGTTTCCTGGGATTTCTGACTGGAAGGTCATTGGGGTTTGTGTCACGTAAAACTATGACTCGGACCCCATGATGGGACCTGCAGGACAATCCCACCATCCCTCTGCGGGGTCCTTTCTCCCGCTCCACACTACACAGTTCAGTTCAACAGCTTCAGAACAGCGTATCTGTATTCTCTCTTAGAGAGGTTTTTGTGTGTGTGTGTGTTTTGTTTTTTTTTTGGTCGGGAACGTTTTAGATACCCACCCTTTTATCAAGAGTGTAATAAATCTTGTCAGTACAGATCTTCAAAAGTGGCCTACGTCACCGTTCTGTTCATCTTAGACTTGTCAGAGAG TCONS_00068476 s 5' 4701 TCONS_00066583 r 5' 1587 EMBV3_17396 TTGACGTGCACCACAAGAAAACCTTGAATGCTTCTTAATTACAAGGAATTTAAGCTGTTT Variant GeneID:618333|EFCAB9:XM_002696269:67_cdna 137^462 1 EMBV3_22621 GeneID:618333 20 GENE EFCAB9 NULL EF-hand calcium binding domain 9 EMBV3_43340 ACTGTGGGCTGTGTTGCCACAGACACTGCAGAGACCAAGTGAAGGTGGAGTGTAAGAAGA Gene GeneID:529375|RASGRP4:NM_001035379:658_cdna Constitutive 0 NULL GeneID:529375 18 GENE RASGRP4 MGC139074 RAS guanyl releasing protein 4 EMBV3_05210 GAACTATGGCTTCTGGATTGTGTTGTTCATCAAATGATAAGCATTACATGCTTCAAATGA Gene BVT0102_143007 + 0 NULL GK000013.2:10515709-10535340 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27666 CTTTGAAGATGGCATCGTACAGCTGAAACTCCAAGGTTCTTGTACCAGCTGCCCCAGTTC Gene GeneID:615964|NFU1:NM_001046566:74_cdna Constitutive 1 NULL GeneID:615964 11 GENE NFU1 MGC127922 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) EMBV3_01762 TCCTAGATGATCTAGAAAAAAAGAGCATAAGAGAGTTTTAAACTCCAGACTTGATATTTT Gene GeneID:537692|MBLAC2:NM_001099079:15_cdna Constitutive 2 NULL GeneID:537692 7 GENE MBLAC2 MGC152119 metallo-beta-lactamase domain containing 2 EMBV3_15769 TCTGAATAGCTCCTGATATAGGCAAAGGGAGCTTTGTTTGGACCTGTCCCAATTTAGGAG Gene BVV0102_104006 + 1 EMBV3_23883 GK000006.2:28075891-28373099 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42125 TATGCGGAGCACACACGTGCCTTCCTCTTCGGTCACACACAGGATACCAGTTTATCCCCA Gene GeneID:533900|RFX4:XM_002687661:33_cdna UTR3_Alt 2 NULL GeneID:533900 5 GENE RFX4 NULL regulatory factor X, 4 (influences HLA class II expression) EMBV3_00623 GGCAGCACGAGGTGGTCTAGCAGGACTGACGCTTACAGGCCTCTATGCTCTATATAATAA Gene GeneID:509841|TIMM23:NM_001083658:8_cdna Constitutive 1 NULL GeneID:509841 28 GENE TIMM23 MGC151644 TIM23 translocase of inner mitochondrial membrane 23 homolog (yeast) EMBV3_16709 GGACTAGGGAAGCTGCTGAATCGTTACCTTATTATAGCTCTTCTCAATGCCATACCTGGC Gene GeneID:521363|LOC521363:XR_084567:333_cdna Constitutive 0 NULL GeneID:521363 11 PSEUDO LOC521363 NULL similar to GC-rich sequence DNA-binding factor (GCF) (Transcription factor 9) (TCF-9) EMBV3_18766 CCTGCCAGACTGTATCTTCCTGCAAAGATTCACAGCTGACAAGGTGAGCGCTGCAATTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25934 CGGCGTGTACTGGGGGCCAGGCCATCCCTTCCTGCAAAGCCATAGAGCAAGCTAAGGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26542 CCTACCGGGACGGGCTTCCGAAGCTGGCAGGTTATGTATGTCTTCTTACATACGGTGAAA Variant GeneID:515878|ORMDL2:NM_001014931:1022_cdna 70^244 1 EMBV3_03494 GeneID:515878 5 GENE ORMDL2 MGC133863 ORM1-like 2 (S. cerevisiae) EMBV3_30956 GCTGCGGACCCAGGAATGGATCTGGAGCTCCTAACTTGTGCAGCTCTCTACACAGCTTAC Gene BVV0102_059980 + 0 NULL GK000019.2:33451245-33524871 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04695 ATGTATGACGAGATCATTGAGCTGAAGAAGGTGATCAACGGGCTGAAGCAGAGGGTCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00243 GAGGACGCCTGGATGGGCACGCACCCTAAGGATAAGGGAAATCTTGAAGGCGTCACGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30929 GGCTGGTTTCATCATTTTGCACTGTGAAATAGCTTTACGGTGCATTACTACAGCCAGAAG Gene GeneID:538584|ARHGAP21:XM_002692070:178_cdna Constitutive 2 NULL GeneID:538584 13 GENE ARHGAP21 NULL Rho GTPase activating protein 21 EMBV3_34057 TAAATGCTTTGAAGCCACTCATGAAGAATAGCCCTCTTACCCCAGCAGCAGGGAGACCGA Gene BVT0102_187980 + 0 NULL GK000018.2:6197661-6551019 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082158 TCONS_00085311 2 XLOC_050923 XLOC_051833 NonCoding TCONS_00082158 XLOC_050923 NonCoding NonCoding - 18:6456304-6534312 - TSS62026 999 1 TCONS_00082158_1 61 0.164164164164164 2 0.987219095722179 1.36629239904787e-05 9.13001824459979e-05 0 1.66781057117032e-05 8.70518188323614e-05 0 5.85689512049804e-06 2.97012706792972e-06 7.92305903688906e-06 4.13179713919052e-06 0.000118867931100418 0 0 0.000106886692306857 0 0 0 0 0.000213801803396464 0.000111650631132194 0.000606122601743949 1.49059976196689e-05 0 0 2.43541712842592e-05 3.53730571071179e-06 0 4.82510874973214e-06 0 3.01885741608325e-06 XR_138724.2 LOC100847870 PREDICTED: Bos taurus uncharacterized LOC100847870 (LOC100847870), 3e-27 127 80.00 0.144144144144144 0 noncoding 0 0 0 0 -0.173888592013478 0.273311490435875 0.0150392040146703 0.800275813209949 CTTTCAAACATTTATTTAAGGGTATCATTTTCTTAATCATTCTGAGGATAATTCAAAATAATTGCCATCGCCACCGCAATTTTTAATTTCAGTGAAATGTGTGTCACAGACTCTCCCGCTGGTTCCTCTCGCAAGAGCCCCTCGGTCGAAAGTACCAACTCACTCAGACAAGACACGCAGGAGGAGCAGCACCCGCCCTGGGGCCGGCAGGGGTCCACCGGCCCTGCTGTTGACCCAACTACGACAGGTCTGCTGGACTCGGTCTCCCTGCTGCTGGGGTAAGAGGGCTATTCTTCATGAGTGGCTTCAAAGCATTTATGTTCTGTTCCATTTTAAAAACAACATGAGGGACGTCCCCCGTGGTCCAGTGGCTAAGACTCTGCGTTCCCAAAGCAGGGGGCGTGGGCTCGATCCCTGGTCAGGGAACTAGATTCCACAGGCCACAACTAAGAATCTGCCAGCTGTGACTCAAGATCCCACACGCAGCACGAAGATCCAAGACCCCGCACGCCACCACTAGGACCAGCGCAGCCACTTTTTTTTTTTTTTCCTGTGGGGAGCCGGTGACCGTCACAGTGCTTGCCGCTGCTGAAAGCTCCAAGTTCTGGAGCACTAGGGAACCCCTTGCTCTGGAGCAGGAACCCGATTTCGAGGCCCAAACGCTGCAACTCAAGACCTCTCAGCAGAGTTTAGGAGTGGAGCTGGTTCTCCGCCCACACACGTGTAGGGCGGGTTTACCGCACGTACGGGTCACGTGCCATTTGGTTACACCAACCTTGGGGCGTTTTCCACCGGGCTGGTCAGGTAGGGGAAACAAATTGGAGCGCCAACAGAGGTAACATCTTAATTAACCAGGGTCCCCATGGAGACCAGAGTGTTTCAAACGCATCCCATTTTTTACCAAGAATTTTATCCCCAACAACTCAGCTGGGGAAGACTCTGAAAGCAGCGCATTTTGGGTCCACGGGCTTCACTGGACCAGCAGAGCGCTGAGCACGT TCONS_00085315 r 3' 16708 TCONS_00085315 r 3' 94715 EMBV3_01483 CCCAAGACATCTCAGAAGGAAGCTGAGGAGGTGAACTGCCCTCACCTCAGCCGTGGATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36290 CAACACTGCTGTGCTTTATGGCCTGGGACTTCACTGGGAGTGGACTTTACCTCATAGCTT Gene GeneID:533548|ZNF346:NM_001105405:11_cdna Constitutive 1 NULL GeneID:533548 7 GENE ZNF346 NULL zinc finger protein 346 EMBV3_05830 ATCTTCCAGTACGAGACTATCTCCTGCACCAACTGCACGGATTCGCACGTCGTCTGCTTT Gene GeneID:510569|MGC148336:NM_001101928:51_cdna Constitutive 0 NULL GeneID:510569 7 GENE MGC148336 NULL hypothetical LOC510569 EMBV3_12929 TACGAGGAGAAACCTCCGCAATGACCTGCTGGTGGCTGCCGACTCCATCACCAACACCAT Gene GeneID:534119|DTNB:XM_002691462:314_cdna Constitutive 0 NULL GeneID:534119 11 GENE DTNB NULL dystrobrevin, beta EMBV3_28756 TACTTTGGGACCATCATGGACTCTTCGGCAAGCATTTATTGAGGCCCTAGTCCTAAGTGG Gene BVV0102_045186 + 0 NULL GK000019.2:44641645-44646806 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100357 1 XLOC_060600 NonCoding TCONS_00100357 XLOC_060600 NonCoding NonCoding - 19:44642397-44644674 - TSS74733 2277 1 TCONS_00100357_2 74 0.174352217830479 1 0 0.00035851627728882 1.32390459106168e-05 0.000154436466739423 7.29394356149875e-06 2.16827888382628e-05 8.16894608538633e-05 6.91507545945688e-05 0 8.31634717107105e-05 2.34907533787546e-05 0 0 3.15028843077235e-05 9.9161699972216e-05 3.87841617060807e-05 5.79964421189183e-05 0 0 0.000100777201963123 0.000724302416257323 6.79939530564647e-05 3.25896268842143e-06 0.00024174058818571 0.000169339738585706 0.000124755262542439 1.23767600225262e-05 0.000349953667711124 0 3.1980302274315e-05 0 XM_005195798.1 LOC101907697 PREDICTED: Bos taurus collagen alpha-1(I) chain-like (LOC101907697), mRNA. 2e-122 444 100.00 0.107597716293368 0 noncoding 0 0 0 0 -0.0814606263892865 0.450445648336448 0.0359485920870505 0.528501847266162 GAAAGAGAGCGCCGGCTTCCAGCCGCGCCTGGGACGCCTTCCGGCCCAGGGTCCCCCGCCCTTCCCTCCGGGCTCCCGGCTCTTTTCCCCCACAGTGCCACCACCCCGGAGTTTACTTATGTGAAGAAGCCAGAGTTGAAGTGGGACGCAGTTGTCACCTCAGGGCAGAAAACCGAGGGGCCTCGTCCGAGCCTCGGTTCCCCGTGTTTCTGGGCTGGTCTCAGCCCACTCCGGGCCTCAGAACCTACAGACGCCCTAGATGAGGGTCCTCCGTTGAGGGCGGAGGCTGAGCTGTGCCATTCTGAGCGGAGCGCCCTCCCCGCCCTCATCTTAATTTAGATCCCACACCTGCTCGCCTTTCCTGCTTCTGGAACCCACGCTGGACCCCCCACCTCTCCTCTTCGCAGCCTGCCAGGCAGTGGCCAGACCCTTCCTCCGACCCAGTTCTTCTCCCCTGTGTGTACCCATATCCGCGCTCTCACAGTCCTCTTCTGGAGCAAAGGGCCTTTCCCAGCGGCAGTAAATGCCTAGACTGGCGCTGCCCTTTCGGTTACTCTGTGTCTGGAGTTCTGGAACAGGTGTATGACAGCCCTCTTCCCGCAGAAGATGAGTTTAAATGAAGAAAGCGTTAAATCATATACTTTGGGACCATCATGGACTCTTCGGCAAGCATTTATTGAGGCCCTAGTCCTAAGTGGTTAAGACCAGGAATCGTCTGAATTCAAATCTGTGGACTTGACAAATGAACTTGAGCAAATGAGCTCTCTGTTGCCTCGGTTTCCTCTCTTGTCACTGAGTATGATGACAGTACTTATTAGGTTGTGGGAATTAACAAGAGAATTGACATGAGAAACTTAGTTCAATGTAAGTGTTTGGTGAATCTTAGCTGTTTTTATGTGTTAATGCAAAGATAAGACACACTTCCTCAAGAAGCTCACCATTTGTGGGGTAGACAGACCTGTAGGAAAGTAATTGCTCAACAGTGTGATAAAAATAAGAGAGCTAGGGACTTCCCTGGCTCTTAACCAGGGGTTAAGACTGTGCTTCCACTGCAGGGGCCACAGGTTTAATCCCTCCCTGGTTGAGGAACTAAGATCAAATACACTGTGTGGCGTGGCCAAAAAAAAAGCAAAAACCATAGGGAACAGAGGTGGCTAGGAGCAGGAATCAAATAATGTAAAAGAGTTTCTCAGGAAAGGTTTCTTGCACTGGCTGAAACATAGGAATTGTTGAGGAAGTCGCATGAAGTAAGCAGAACAGACCACACAGGACTAAGGGTGTTCTGAGAAGTTAGTGGGATTTAACCCTACAGGCTGTCAGGAGTCCTCAAGGGGAACTGTTTGACCAGACTTAAGCAGATGCTCTGGAGTGGGGAGTCTGGATAGCTTAAAAGTAGGAGGTTTTTGTCATAGCTTGAGATGTGTGGGGTGAAGGAGAGAGAGAGCCTGAAGACATCATTAACTAAGATGGGGGACTCTGGAAAGGTGATGTGAGGATACAGGAGAATGACGAGTTCTCCTGTTTGAGTTTGAGATTCATTGGGAGTTATACTGTGGGATTAGCTGGTGGAGACTCTCAGAAGGTGTTTGAATTTGAGTCTAGAGCCAAGAGGAGGCCAGTACTTCAAGTGTCTTAGTGTGAATCAGAAATCCTCCACTCCGATGATACTGATCTGTTTCTTTGTCTCAGAATATGTTCAATATAACCTGCCGTAAGGAATTTACATATGCCCAGGAAGCCTTCCTGTCTCCTCCATGTTTACCTAAATCCTTCCTCACTTCTCCACCCAGGCCACCCTCACAACAAACTCCTTTAAAACTGGATTGTACTCTTCATTTGGCACTTGGCCTGAGTGGCTCTGTGGTGGTGACCTCTTTGGGCACGTGCCCGGTCTCCACAGTTAGCACCAGTCAATAAACACTAAGGACTACATTGGTCCAGGCTCTGGGTGAAGCCTTGGGGTTACAGCAGCGAGCCAGAGAGGCACACAGACCTTGTCTTAGTGGAGCTTACTGCCCAGCAAAGCCTGATGTGGAAAAAAGGTTGAATGTGGAGCCATTCAGGCAGCCAAAGAAACAAACGGGTAGAAATCTTTTTGTCAGGACGTCAGGGCAGGCTCCCTAGAGGAAGTGATCTTTCAAGTGGAGCCTTGAATTAACTAGAAAGAGAGGTTAAGAGGAGCATTCTAGGGAACAGTTATGTATATAGGCAGAATGTGTAGAGGCCTGAGAAGAGAGTGTGGTGTGTTTGAGTCTGGGATGGTTTGTGAAGTTAGAG TCONS_00097206 TCONS_00097207 TCONS_00097208 TCONS_00097209 TCONS_00097210 TCONS_00097211 . 5' 754 TCONS_00097206 TCONS_00097207 TCONS_00097208 TCONS_00097209 TCONS_00097210 TCONS_00097211 . 5' 754 EMBV3_09884 TCCTACCAGCAGCAGTGATTTTGGTGAGAGATCATTTCATGTCAGGGAGAAGGCTTGCCT Gene GeneID:100295234|LOC100295234:XM_002687011:46_cdna Constitutive 0 NULL GeneID:100295234 4 GENE LOC100295234 NULL hypothetical protein LOC100295234 EMBV3_36855 CGCAAGAGAAAAATCCACTGCCTTCGAAAGAAACGATTGAACAGGAGAAGCAAGCAGGCG Gene GeneID:100296978|LOC100296978:XM_002692703:109_cdna Constitutive 0 NULL GeneID:100296978 14 GENE LOC100296978 NULL similar to thymosin, beta 4 EMBV3_31495 TATCTATGGAAACAACACACCAACTGGAAAACCAGGCCCCCTAGATGGAAGAGCCCCAGG Gene BVV0102_273041 + 0 NULL GK000009.2:95953589-95977100 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073099 1 XLOC_044867 NonCoding TCONS_00073099 XLOC_044867 NonCoding NonCoding AGRN 16:52696449-52697230 i TSS54943 781 2 TCONS_00073099_3 96 1 0 6.96833639082879e-05 2.57321329082143e-05 7.10934491045852e-05 3.18980994356476e-05 0 0 1.49339519525206e-05 0 0 0 8.79327091067144e-06 0 0 0 0 0.00240105073359685 0 0.00439331881187592 9.18172071115487e-07 2.76239090435622e-05 3.88698111460343e-06 0 0 4.29313283783994e-05 0 0.000180421779256385 0.00112281681856531 3.689566072396e-05 0.000991434756824154 7.69814214737503e-06 XR_228089.1 LOC101904097 PREDICTED: Bos taurus uncharacterized LOC101904097 (LOC101904097), 0.0 866 100.00 0.613316261203585 NM_058172.5 ANTXR2 Homo sapiens anthrax toxin receptor 2 (ANTXR2), transcript variant 2e-22 111 73.26 0.236875800256082 0 noncoding CCACGAATTTGGAGTTGGGTGGGGAGAGGCTTGGGGATGATTCAGACGCATTACGTTCATTATGCCGCCACTGATCTCACAGGAGGCAAAGCTCAGCTGGTAATGCCAAAATGGGGAGCAGCTGTAAACACAGATGAAATTTCGCTTGTTCACCAGCACTCCGACCCCTCACCTCTTGCTGTGTGGTCTGAATCCTAACAGGCCACTGACCAGTAGCGGTCCATGGCCTCAGGGTTGGGGACCCCTGAGGTAGGGGATGGGGTGGAGCTAGCTGATCCATACCTTCTGTCCCTCCCCTCTAGGACAGCCCCAAATCCATCTCTTTCGGCCAGGTCCTGCCCATGTCTAGGAGGAAACAGAAAGCTGGAGGAGCCAGGGTGGCACCCAGGTGTGGTCAGTGCCGGTGAGTCAGGAGACCCTGTATTCCTGCTGAGGGCCATGGCCAGGCCAAGAGAGATGCACAGTCCAGCACAAAGGTCTGAGTTGGGGGGCGGTGCTTCTTGGAGGTATTGACCAGCTGGATGTCAAGATGAAGAGGAGTGGCAGACAGACACCTATTGGTGAAGGAGGAAACAGACAGACCAGGCTCCATCTTGAAAGCAGGACTCCATCTTGGGCTGGACTGTGGACTCTGAGCTATATGCCCAGTATCTATGGAAACGACACACCAACTGGAAAACCAGACCCCCCGGATGGAAGAGTCCCAGGGCTCGTTCCTAGACTCTCTGTTACCTAAAATACCCTAATTATCTGTGTAACCAAATAAAATCATAAATTCTAT TCONS_00069558 . 5' 4929 TCONS_00069558 . 5' 4929 EMBV3_41451 GGACCTGGAGACCCGTAAGAAACAAAAGGAAGATGTGGACATTGTAGGAGGCAGTGATGG Gene GeneID:777693|CDC26:NM_001078153:62_cdna Constitutive 0 NULL GeneID:777693 8 GENE CDC26 MGC127671 cell division cycle 26 homolog (S. cerevisiae) EMBV3_08317 GCAGAAATCCCATTGAGCTGGGAGGAGATCTTCGTGCTTGGCACAGTTCTCACAAGCTAA Gene GeneID:783090|LOC783090:XM_002690169:56_cdna Constitutive 1 NULL GeneID:783090 9 GENE LOC783090 NULL similar to chromosome 6 open reading frame 168 EMBV3_11295 GTGCTTTAAGCCGGAGTTCGAGCAGATTGTCCTTGGGAAGCGAGAGGTCCGGAACACGGA Gene GeneID:515029|UPP1:NM_001098976:1_cdna Constitutive 2 NULL GeneID:515029 4 GENE UPP1 MGC152519 uridine phosphorylase 1 EMBV3_34012 TGAGAGCAGCTGAGCCGCAGGAGTTGATGTGATTTCTGTTTACTGCCACTGAGTCCATGT Gene BVT0102_033236 + 0 NULL GK000006.2:70027929-70179363 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209245 1 XLOC_127756 NonCoding TCONS_00209245 XLOC_127756 NonCoding NonCoding - 6:70095758-70096498 - TSS156752 740 1 TCONS_00209245_1 35 1 0 0 0 0.000162570185042636 0.000100996406411103 0.000246859585347013 1.45015623398997e-05 0 0 2.13246829984681e-05 0 0 0 3.8774034270569e-06 0 0 0 0 0 0.000193808964558999 0.000106899783190711 0 0 0 0 1.87256110581127e-05 0.000276105989538594 3.95888584238897e-05 0 0 0 0 noncoding 0 0 0 0 0.0993558762387157 0.55143776440438 0.0430340788184859 0.620268192241396 GAATGAGGCTGACTTGCTGGAAGAAATCATGCCAAAAGTTGGCATGTCAGGATGTGGTATTAGTGTGTTTACATGTTAAGCCAGTTGAGAAGTTTGTGATAATGTGCTAATTTAGAATGATTGTTGACTACTGAAATCTTTCTATCAATCCCGATACTGATGCTGTGGGCCTGGGACTGATGGTTCACAAAGGAAGAAAACATTCTCAAACGTGGTGCTTTTGCAGAGCTCCAGCTAGTCAGGAGATTCTTTTTTCATCCTAGGCAACTGTTACTGGTCTATAGCACCATGGGAGAATGCAGTCCTTATTTCGGTGATTGAGTTAGATACACATTATGATTTACTTGTTTTTGAAAGACACAATTTAGGTCAGAATCACAAGGAATGAAATCAACTACTCCCAAAATATGGAGCTGGTTAGTGGAAAGTGCTTAATTCACTAATCTATAGGTTCCAGGTGGAAGTATTTCAAGTAAAATAACACGCTTGGTTGTCTGATTCCTTCCTCTTCCCCTGGGGAAGGAGGGGCTTCTCTCCTGGATGAGTTGGAGAAGGAGCTGGGCAGCTTCTCCCCACCTCCGGGGCCCTGAGAGCAGCTGAGCCGCAGGAGTTGATGTGATTTCTGTTTACTGCCACTGAGTCCATGTAACATATTTACTTCATGCTTCTGTCCATGTTATTATTAATGTTCATTATCTGGACTCTGGGATGAATTTTGCATAATGAAGACAGTTCATGCA TCONS_00203487 . 3' 31078 TCONS_00203487 . 3' 31817 EMBV3_02585 GACTGTATTCTGCATTTTCTCCTTTGGGGAAGAAGGGAACCAGCACTTACCCGTGACCAG Gene GeneID:781149|AFF1:XM_002688397:56_cdna UTR3_Alt 2 NULL GeneID:781149 6 GENE AFF1 NULL AF4/FMR2 family, member 1 EMBV3_15890 CCCTCGTCCTGATCCACGGAGAAGTGGTTCACAAGAGTGAGCAGAACCTTTCTGACCGCT Gene GeneID:540828|PHYHD1:NM_001076243:184_cdna Constitutive 1 NULL GeneID:540828 11 GENE PHYHD1 MGC152146 phytanoyl-CoA dioxygenase domain containing 1 EMBV3_17093 CTGTCTGATGATTCTAATGGGTCAAATCTTCAGGAATGTGCTTCTTATGCCAGGGATCTG Gene GeneID:518852|EHHADH:NM_001075780:84_cdna Constitutive 0 NULL GeneID:518852 1 GENE EHHADH MGC126977 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase EMBV3_02382 TCCCTCGTGGTCCAGTGGTAAGGACCTAGAGTTTTCACTGTCTGCAAAGAGGGTCGCAAA Gene GeneID:518612|PCDHB13:XM_002689254:157_cdna UTR3_Alt 2 NULL GeneID:518612 7 GENE PCDHB13 NULL protocadherin beta 13 EMBV3_14278 GACTGCAGCATGCCAGGTTTCCCTGTCCATCACCAACTCCCAGAGCTTGCTCAAATTCAT Gene GeneID:281694|CLCA3P:NM_181018:8_cdna Constitutive 0 NULL GeneID:281694 3 GENE CLCA3P CLCA3 chloride channel accessory 3 (pseudogene) EMBV3_26151 CCCATCTTCCACGGCTGTGCTTTGAGCTGGTTTCCTCTCCGTCAGGAGTCACAGAAATTA Gene GeneID:507276|DHRS12:NM_001100313:58_cdna Constitutive 1 NULL GeneID:507276 12 GENE DHRS12 NULL dehydrogenase/reductase (SDR family) member 12 EMBV3_07580 TATCTCTGTGCCAGCAGCCAAGACACAGCCCTGCATGATCAGGTGCCTCTGGGACAAAAA Gene GeneID:100300818|LOC100300818:XM_002687099:371_cdna Constitutive 0 NULL GeneID:100300818 4 GENE LOC100300818 NULL similar to immunoglobulin iota chain EMBV3_43786 CTCCTTGCTCGGAAAGACAGTGAAACAGGCGAAAACATAAGGCAGGCGGCATCTTCCCTT Gene GeneID:517535|HSPA9:NM_001034524:10_cdna Constitutive 0 NULL GeneID:517535 7 GENE HSPA9 HSPA9B MGC127342 heat shock 70kDa protein 9 (mortalin) EMBV3_12119 CTGGATTATGACGATGAAACCATGGAGCTGATTCTCCCTTCTGGTGCCAGGGTGGGTCAT Gene GeneID:513617|ZNF622:NM_001034451:20_cdna Constitutive 1 NULL GeneID:513617 20 GENE ZNF622 MGC127282 zinc finger protein 622 EMBV3_12464 CGAAGCAGTACTGTGAGCAATTCAGATCAGTTTCCTCAACTTCTACTGCCAGAAGACCAA Gene GeneID:539917|PIH1D2:NM_001038189:116_cdna Constitutive 0 NULL GeneID:539917 15 GENE PIH1D2 MGC133700 PIH1 domain containing 2 EMBV3_05388 ATTAAATAGGGTCACTGAGACCAGAGACCTGGGATATGGCTCACAAGAGGAGTTCCCTGG Gene GeneID:534781|PBK:NM_001102178:58_cdna UTR3_Alt 3 NULL GeneID:534781 8 GENE PBK MGC165897 PDZ binding kinase EMBV3_10259 TTCTCCAAAGTGGTGAGGTAGCAGACACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTT Gene GeneID:506945|BHLHB2:NM_001024929:14_cdna Constitutive 2 NULL GeneID:506945 22 GENE BHLHB2 NULL basic helix-loop-helix domain containing, class B, 2 EMBV3_43700 AACTGCCTCAGCATCACCTGGGAACTTGTTAGAAAAGCCAAGTTCTCCGCCCTGGCAGAT Gene GeneID:100335867|LOC100335867:XM_002692145:134_cdna Constitutive 0 NULL GeneID:100335867 13 GENE LOC100335867 NULL hypothetical protein LOC100335867 EMBV3_11617 AGCTCAGGAGATTGAGAATTAAACAAGATGTCTGTGTGGCCTGGCGGTATCTGGACAAAG Gene BVT0102_180982 + 0 NULL GK000008.2:104239719-104241908 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226532 TCONS_00226531 TCONS_00226536 TCONS_00226534 TCONS_00226535 TCONS_00226537 TCONS_00226533 1 XLOC_138027 Coding TCONS_00226531 XLOC_138027 Coding Coding PRPF4 8:104218870-104243382 j TSS169354 5926 1 TCONS_00226531_4 397 0.0971987850151873 13 0.758761372445025 0.000870274993464561 0.000879086898704991 0.000964398318247107 0.000505699618141918 0.000231173032592778 0.000120416263035221 0.000580327636018787 0.000738735563004252 0.000645161446378281 3.92920613223368e-05 1.1751132067181e-69 2.26800587350196e-31 4.24560698463479e-05 9.65854484192414e-13 0.000159067939635895 8.94569133152776e-19 9.88102686045562e-05 1.05904298610215e-12 0.000526466751721381 0.00076378431827702 0.000617636711632977 1.94820296099165e-17 4.74897001961853e-08 2.73040386037249e-09 0.0010116736696236 0.000734121026522542 0.000754591322996287 2.45177749942088e-23 2.36701803420645e-22 1.92087453785894e-32 XM_005210520.1 PRPF4 PREDICTED: Bos taurus PRP4 pre-mRNA processing factor 4 homolog (yeast) (PRPF4), transcript variant X2, mRNA. 0.0 2118 99.75 0.198953763077962 NM_001244926.1 PRPF4 Homo sapiens pre-mRNA processing factor 4 (PRPF4), transcript 0.0 1631 90.16 0.202159973000338 TCONS_00226531_4 sp|Q3MHE2|PRP4_BOVIN PRP4_BOVIN U4/U6 small nuclear ribonucleoprotein Prp4; 0.0 721 99.46 0.92191435768262 2 coding 0 0 0 0 -1.63622097269135 0.000334047131849268 0.0320143484167484 0.594253887730319 AGACTCCCTGCTACTACGATTCCCATAATGCTCCACGCCTCCCAGGATGTTGCGTCGGACCTCGGACCACTTCCGTTCGGCGACGTAGTTCCGCTTTGCCGGGCGCGCGGTGGACGGTCTGAAACGTAGAGCGCGGCTTTCGCTGGGGCTTCGCGTCTCCGGAGCCCAGCATGGCTTCCACACGACCCTCCTCCACGGCAACCAAAACTAAGGCACCAGATGACTTGGTGGCTCCTGTTGTGAAGAAACCACACATCTATTATGGAAGTTTGGAAGAGAAGGAGAGGGAGCGTCTGGCCAAAGGAGAATCTGGGCTTTTGGGAAAAGAAGGACTCAAAGCAGGAATTGAAGCAGGAAACATTAACATAACCTCTGGAGAAGTGTTTGAAATTGAAGAGCACATCAGTGAGAGACAGGCTGAAGTGTTAGCAGAGTTTGAGAGAAGGAAGCGAGCCCGGCAAATCAACGTTTCCACAGATGACTCAGAGGTCAAGGCTTGCCTTAGAGCTTTGGGGGAACCCATCACACTTTTTGGAGAAGGTCCTGCTGAAAGAAGAGAAAGGTTAAGAAATATTCTCTCAGTGGTCGGTACTGATGCCTTAAAAAAGACCAAAAAAGATGATGAGAAATCAAAGAAGTCCAAAGAAGAGTATCAGCAGACCTGGTACCATGAAGGACCACACAGCCTGAAGGTTGCTAGACTGTGGATTGCTAATTACTCACTGCCCAGGGCAATGAAACGCTTAGAAGAGGCCCGTCTTCATAAAGAGATTCCTGAGACAACTAGAACCTCCCAGATGCAAGAGCTGCACAAATCTCTCCGATCTTTGAATAATTTCTGCAGTCAGATTGGGGATGATCGTCCTATCTCCTACTGTCACTTTAGTCCCAATTCCAAAATGCTGGCCACAGCCTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTGTTCCCGATTGCAACCTCCTTCACACTCTTCGAGGCCATAACACAAATGTGGGAGCGATCGTATTCCATCCCAAATCCACAGTCTCCTTGGACCAAAAAGACGTTAATCTGGCCTCTTGTGCTGCTGACGGTTCTGTGAAGCTGTGGAGCCTTGACAGTGATGAGCCTGTGGCAGACATTGAAGGGCACACCGTGCGCGTGGCCCGTGTGACGTGGCATCCATCAGGGCGCTTCTTGGGTACCACCTGCTATGACCGATCATGGCGTTTATGGGATTTGGAAGCTCAAGAGGAGATCCTGCATCAGGAGGGCCACAGCATGGCTACCACATTGCAACTGGCAGTGGCGACAACACCTGCAAAGTGTGGGACCTCCGACAGCGACGTTGTGTCTACACCATTCCTGCCCATCAGAACTTAGTGACAGGTGTCAAGTTCGAGCCTATCCATGGGAATTTCTTGCTCACTGGTGCCTATGATAACACAGCCAAGATCTGGACTCACCCAGGCTGGTCCCCTCTGAAGACTCTGGCCGGCCACGAAGGCAAAGTGATGGGCCTAGACATTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCCTATGACAGGACCTTCAAGCTCTGGATGGCTGAATAGGCAGGACCATGGAAGAAGGACTCAATCTCCCTTTAGAACCATTTTCAAAAGAAAGGAACTGATGTGTTTTGTTCTATCATGTACTTTGCCAATTACCATGTATATAGATCCTCAAAGAATCGAATTTCTGTCTCAGCTCCCACTTCAGGCAAGCAGCCCAATCCTTGGGTGTTGGTCAACCCCTTCCATGGTTGAAAAATTTGTTTTCCTCTTCAAGCCCCTCCATGAACTTTGTAGACATTGTTTTTATTAATCTTTTGTTTGAATGCCCTCTTGCTTCCCTCAAAGCACTCAGGATTTTTACTTCTTGAAACCTGTCTTTCCGTTACATGGTACGTGTTTCAGGACTCCATGTGACCCGGAGAGCACGACGGCCGTGCTCTGCAGGAAGCCCTCAAGTAGAGAAGCGCGTCTCTCTGTGCGCTGGCTGAACAGCACCTGACAGAGGAGGGCCCTGAGCATGGAAGGTGAAGACGTGGGCCACAGCTGTGTCCTGGCTTCCGCAGCAGAGGTTCACCTCATCCTGTTGAGTTCACTTGGAATGCTAACTGCATCAGGAAGTCCAGAGCTGAGCATCTGCCTCTTCAGAAGATGTCTTCCATTTTGCTTTGAAGTTTGGCATCCTTTGTTACCCCAAAACTAGGCCACTGTGTCAAGATTCAATGAAATTTTTAGGAAGCAAACACGATGTCTCTACTGTGCAAGTTCTTTTCTGTTGGTTATTTATATGTATCCTTCATGTGGAGATAACTCTGGGGAAAAAAAAAATCCCTAATGGGTATTCCTAAACATAAACTTTTTTTCTTTATTGCACACTTGCTACAGAGTAAAATCCTATTTAAAAAACTGTCCTTTAAAGAATTATTTTTATAGTGAAGCCTTTCCTGAGTCCCAGCCATTGGTCCACAGAGATCCCTTTTTTTAAATTTGGGATATAACACATGATCTCAAGTATGGCTTATTCCAATTCCATCTCCTTAGTAAGCATTCTGTCAGTCATTTTTTTAAAAATAGAGGGCTGTTGGATTGTAGGCCAGACTACCAGTGAGCTGTATCTGGACCCTCTAATTCTTATTCATCGGCCACGCAGCAGTTACCTTCTCTTTCCACCCCAGATATACAACCACTGAACTCTGAATTCACAGATTCACACAAAAATAGAATTGGCAAGGATTGTGTATAGAAAATTGAAGGGGCTTATATGGTGGCTTCTTGAACATTCAAAACACTTGTCCTTTGCTTCCCAGGGAGGCTGACAGTTACTCTTGTACAAACTATGAATGAGTGACATGTAGCTAAAGGGACTTTTTAGTCTGATTTCAGCTGCAACCAAGTGGGTGCGCATCCTGTGTGCCTCTGGAGGTTCTGGATTATCAGCTCTGCCTTCCGTTGTGCACTTCACTCTCTTCACTGTTTAACGGGCTCTATTTCCTCCATAGTTGTGGTTTAGTTGCAAAGTTGTGTCCGACTCCTGCAACCCCATGGACTGTAGCCCAGCAGGCTCTTCTGTCCATGAGATTCTCCTGGCAAGAATACTGGAGTGGGTTACCATTTCCTCCACAGTTAAGCCATGAAGAATTGTTTTTTTCATAACTACCTTTGTAGTGTATTGTAACTAATAATGAACCTTAGTATATTAGCATGCAATTTTTAAATATAGTGTGTTCAAGATTTTCTCAAAGTGAAATTTTACTATCATTCAAACTTGTCTTCTTTTTGGGAGAATGGGGGGTTCCAAGTGATTTAGAAGTAGCAACTGAGTGAAAACATTTCATCTAAGCCTTTGGCAAAAGAAATGTGGAATATACATTTCCTCACTGGAAATATTGTTAGAAAGCCTTTGGCTGAGGAGCATACACTGAGTGTGGCATTTCATGATCATGGTGAGATAATCACACTGCCATCACTTAAGGGACACTTTGTCCAGATACCGCCAGGCCACACAGACATCTTGTTTAATTCTCAATCTCCTGAGCTAATTATTATTGCCTTTTTTACAAACAAAACTACAGTTCAAAGAAGTAACTTGCTCCAGATTACCTAATTAGTAAGTGGTAAAGTCTTGACTCTGACCTTATAAGAGGTTCATAGGACTTTAGTATGTTAGCAACACTGACCAGACCCAAAAAAAAAAAACACACCAGTCCAGTCAGCACGGCCTGTTCCCTGTACAAAGCCTGAACTTTTTAACCACTCTACCTTGTATTTATTTTTTACTTGCATTTATTTTTTTGGCAGCATTTATTCCCAGACCATTACGTTTTTTGTTTCTTCATTTTCTTCTGGGGTATGTTTTTCTTCTGTGCCACCTCCTCTTCCAGTTTAGAACAGTCTCCTTTTTCAGTGAGAATTTGTCCTTTTTTCAGCGTCGCAGGGACAGTGAGGATCGTCTCAGTGTGGCAGGGAGAGCTCCTGGATCGGGTGAACCCACCATGAGCTCTGTAAATCCTGCGCCCCCTCTCTGGGGCTTTGTTCACCTGGATGTGCTTGGTGGCCAGAGCATCTGAATCTAAGCCCTTCAGTTAGGCATTGCTCTCTGCGTCTTTGAGCATATACAGTAAAAAGCCCTCTGGACCACCAACCCTGCATCCAGCTCCTCTTTGGCCTGAGCAGACCTACAAACTCTATCATTGTGATGACAGAATGGCATGGCACATGTTCTATAAAGGGACATCGTTCAGATACTTGGTGGCATTTCAAATATGCATACCCTAAATGGCCTGGGCCATTTCACAAGTGTTCTTAAAGTGAACATGGGAAGATTTTTGAACCTCTTGATTTGCATGATTTTCTGGGATTTCTGGGTCAACTGAATAGCAAACCATTTTTAGAAGTCACCTTCTTTCCCCTGGCCGGCACACAGAGGCTGCATGATGCCTGGAGTTACTGGAAAAGACATGAACCAGCAGGAGTCTCAGAGCGCCGGCCGCCTTCCTCAAAAAGTTCGGGAAGCTGAGAGTCCCTGAATGGCTGGACACTGTCAAGCTGGCCAAGCATAAAGAGCTCACTCCCTACAATGAGAACTGATCCTACACACGAGCTGCTTCCATCGCACAGCACCTGTACCTCCAGGGGCGCTGGGCTTGGCCCCACGACCATGATCTCTGGAGGGGCATCAGAGGAATGGCATCATGCCCAGCCACTTCAGCAGAGGTTCCAAGAGTGTGGCCCATCAGGTCCTCCAAGCCCTGCAGGGCCTGAAAATGGGGGAAAAGGACCAAGATGGGGGCTGCAAACTGACATCTCAGGAAAAAGATCTGGACAGAATCACCAGAGAGGTGGCAGCTGGCAACAAGCAGCATTAGGGCAAATGGTCCTGGGTTAATAAATTGCCTCATTCCTTAAAAAAAAAAAAAAGTCACCTCGGGTCACTTACTGGAAAAGCCTGTTCCACCGTTTATACCACATCACTGCATCTGTTACTCTGACTTCATGCCAAAGGGAGTTAATTTCATCACTTGTACCTGTGAACTTACAAGGAGCCTACAGTGTTACTCAACAGGAAACTATTTGTATTTTGGGTCAGATGGTGCTTTGTTCTGTAGAAATGTCTTCAGCATTGCAGCATGTCTTAGCATCCCTGACCTCTGAGTACCAACAGCCAGAAACAAAACTCACCCCTGCATTGGAGGACCAAAGATTTCTAAATGAGCTCTAGAAGGATGGCACTGCCCAGTGTTAGAACCATTAATATTAAATGTGAAAACAGAAGATGCTGCAGTGTTAACTATATAACCTTCCCTATTCCAGAATACTCAAAGCTGAGTCTTGCTTGGTGAATCAGTCACTCCAAGAATAGAGGTTCTGTTTTGACTGTAAGGCCTCCACCACATGCTAGCTGGGTGACCTTGAACAAGGTAGCTAAACTTGGGGAGCCTCAGTTTCATCTGTGAAATAGGGGTGAGACCTCCTGAACTCAGGAGCAGTCGGCCCTAGTACGGAGGCAGGTGTTCCTTCCTGAGCTTCCCCTAGCTCCTCTCTGTTCCTCATGGCTCTGAGAACGTGAGCTCATTGCCTAATTTATCCGCCACAAGGTTAAGAAGCAAGAATGTGTAAAGAAATGAAGTCAGTGGGGAGAAGTGTGGAGTCCCAGCTTTAGGGTAATTACCTGATGGCGCAAATGGAGAGGTAGATGCTAGTCCCTTGGCAGGATATGAAGGCGGCTTTCCAATTTCGTAATGGAGAACTTTTCCTTCACAGTGGAGCTTAAGGCTTTGGTGTTGCTAAACATGAAGTCTGCATGTCTTGGCAATTTGGGACTATTTTATACATTAAGACCCATAAGAATTTATAGAAGCTGCTAAGTCGCTTCAGTCGTGTCCAACTCTGTGTGACCCCATAGACAGC EMBV3_09496 CTGAACTCATACAAAGCATGCAGAGAAGCCTACAAACACTCCTGAGAGTTTCCATGGAAC Gene BVV0102_089299 + 0 NULL GK000001.2:71516790-71541776 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02648 GGTGATTAAGAATCCAGTGTCAGACCACTTCCCATGGCAAGGTGGACGTGGAGTACACAG Variant GeneID:515362|EMG1:XM_002687861:96_cdna 658^767 6 EMBV3_35697 GeneID:515362 5 GENE EMG1 MGC138092 EMG1 nucleolar protein homolog (S. cerevisiae) EMBV3_03122 ACTAGTTCTGTGATTTGGATGCCTGACAAGTTTCCCTGGCCTCAGTTTTCTCGTGTGTAA Gene BVT0102_230922 + 0 NULL GK000010.2:79486869-79501732 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13967 TGCCACTTGGATGACAGCAGGAAACACAGAGCCCACCATGAGCTGGAAAAATGTTCGGGA Gene GeneID:529442|UPF3A:XM_002692003:122_cdna Constitutive 1 NULL GeneID:529442 12 GENE UPF3A NULL UPF3 regulator of nonsense transcripts homolog A (yeast) EMBV3_10929 TAGGACAAGATGAATTTAAGCGTGCTGTCTATGTAGCCACTGGCCTCAAACTTTCACCAC Gene GeneID:536426|EFHA2:XM_002698667:143_cdna Constitutive 0 NULL GeneID:536426 27 GENE EFHA2 NULL EF-hand domain family, member A2 EMBV3_13063 TATAGTTTGAGGATGAGGTTACGGCCTGGGAAGCTCTAGCCATGCACGCTGCTGTCCTTT Gene GeneID:282638|P2RY2:NM_001166525:131_cdna Constitutive 0 NULL GeneID:282638 15 GENE P2RY2 NULL purinergic receptor P2Y, G-protein coupled, 2 EMBV3_06901 TCCGGTGGGGTGTGTTGGAGAGGAAAAGAGAGAAAAGGAGCAAAAATGGAATAACTGCAC Gene BVV0102_000583 + 0 NULL GK000006.2:53244051-56006020 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40817 GAAGGAGGGAAGGGCTCCCTACATGGGGACAAGCCTCTGACAGTTAACAGGATCTTCAAA Gene GeneID:506314|IL16:NM_001075253:9_cdna Constitutive 0 NULL GeneID:506314 21 GENE IL16 NULL interleukin 16 (lymphocyte chemoattractant factor) EMBV3_00447 ACTGCAGAAGCTCCCTGTTTGTCTGGGGGGAAAGCCTGTGGAACAGTGGTTATTGCCATT Gene BVV0101_010847 + 0 NULL GK000022.2:44547392-44810839 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05195 TGCTGGCGTGGGTTGTTGTGGCTGACCAAGTGACTCGTGGGGATGTGTTCCATCTGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14477 GTCATGCCATTCCCACCCGCACCATGCACTTTGAGAAGCACTGGAGACTACTGGAAAGTA Gene GeneID:514572|ANAPC4:XM_002688159:43_cdna Constitutive 0 NULL GeneID:514572 6 GENE ANAPC4 NULL anaphase promoting complex subunit 4 EMBV3_33592 TTGACTCTTCTCGCTTAACTACGTCGGCGGAGACAATCTTTTAAGAACAGTTGCTACTCA Variant GeneID:540298|COQ3:NM_001076210:8_cdna 127^406 3 EMBV3_39475 GeneID:540298 9 GENE COQ3 MGC127187 coenzyme Q3 homolog, methyltransferase (S. cerevisiae) EMBV3_18679 CTTTGCCAACGCCGTCACCCAGGAACCCATTTACACCTTCACTGCGTCCTTCACCCAGAA Gene GeneID:515628|TRIM10:NM_001015607:129_cdna Constitutive 0 NULL GeneID:515628 23 GENE TRIM10 MGC140442 tripartite motif-containing 10 EMBV3_32856 TCGCTCCCGATCCAGGTCTCGGAGCAAAGGTCGTTCTCGATCTCGTTCCCCCAAAGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14291 TGTTCACCAGCACCGGCTCCAGTGGGCTTTATCTGGAGGTTGATTTCTGGAAGAATAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21558 TCGCCTCCGGAGAGCAGAGTCCACACGGAGAAGCCACCCTGATGTTCACAAATACAGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34164 AGTCACTCTGATCTTTTTCCTCGGGGGTGTAACCTTTGCTGAAATTGCTGCCCTGCGATT Gene GeneID:510197|VPS33A:NM_001046049:111_cdna Constitutive 0 NULL GeneID:510197 17 GENE VPS33A MGC128442 vacuolar protein sorting 33 homolog A (S. cerevisiae) EMBV3_18734 TGAGTTTACAGCCCTATGCTTCACCCAAGCTACTTGCTTTGGGCAATGAAACTTCAGTAC Gene BVV0101_002610 + 0 NULL GK000016.2:5124230-5201030 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23043 CTACTACAAGCGGCCGATGCTTCTGATCGAGTTCGACCCCACTAAGCCTTTCTCTCTCAT Gene GeneID:516371|ERCC4:XM_002698030:235_cdna Constitutive 0 NULL GeneID:516371 25 GENE ERCC4 NULL excision repair cross-complementing rodent repair deficiency, complementation group 4 EMBV3_36060 GCAGCTACAGAAGACAAAAGCCAACAACAGCAGAAGAAGCCTTTGTAAATGACATTGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35434 TCAGAACCACAGAGAAGCCAGTATGTAACCAGATGCACGGCCAACAGAGCCCAAAGAGGA Gene BVV0102_080561 + 0 NULL GK000003.2:88119291-88490623 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170541 TCONS_00170531 TCONS_00170540 TCONS_00170535 TCONS_00170537 TCONS_00170536 TCONS_00170528 TCONS_00170532 TCONS_00170529 TCONS_00170539 TCONS_00170538 1 XLOC_103604 NonCoding TCONS_00170531 XLOC_103604 NonCoding NonCoding LOC100847306 3:88196743-88464129 j TSS127398 421 3 0.998436711109449 0.000460026839519813 5.72496938186133e-08 0.00111807632315341 0.00145375342291823 0.00153146110966286 4.97880541523368e-05 0.00165883960166865 0.00016565477014478 0.00123259126757444 0.000212881444211673 0 0 4.08596922403505e-05 0 0 0 0 0 0.00322081689117949 0.00224907472568095 0.000120293355045416 0 0 0 4.20726967256668e-14 0.00236207957461002 1.07083002800728e-14 0 0 0 XR_230686.1 LOC100847306 PREDICTED: Bos taurus uncharacterized LOC100847306 (LOC100847306), 2e-100 369 100.00 0.482185273159145 0 noncoding AAGTGGGATCACCGGGAAAGATTAGGAAGTGGGATCACCGGGAAAGAGCGGTAGCCACAGAGGGATGCGCACGCTGCCAGAACTTCAGTGCTGAAAGCTGGAGGAAGCTGAAAAGAAATAACTTTCTCTCTCGCCTCTCGCCTCGGGTTTTCTGCCAGTTCCTCCCACTGAGAAAACTCAACTGGAAACTTAAAGCTCAGCATTGTGGATTGTCCCAGCAGTTGGGAGATTCAAGGAGTGGGGAGCTTCCACCTAAAACAGACAGGCACAAAAGCCCAGGGATCCAGCAGAGCCTCAGAACCACAGAGAAGCCAGTATGTAACCAGATGTACGGCCAACAGAGCCCAAAGAGGAGCATGTCAAAAGGACAGAAAGAAGATGTCAAGGCCAAAGAATATAATCAGGTTATAGTAGTTCTTAG EMBV3_40899 GGGCAGACTGACCATAAGTGGTCCTCCCTGTGCATCCTTTGATTACTCTCATGCTGCATT Gene GeneID:510769|NDEL1:XM_002695876:381_cdna Constitutive 0 NULL GeneID:510769 19 GENE NDEL1 NULL nudE nuclear distribution gene E homolog (A. nidulans)-like 1 EMBV3_37152 TGCCTAAACGAAGCAAGGGACTATGAAGTGTCAGATTGTGCTCCTCGTCTTGAGTGCCTC Gene GeneID:505011|SPC25:NM_001034230:205_cdna Constitutive 1 NULL GeneID:505011 2 GENE SPC25 MGC128692 SPBC25 SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) EMBV3_41287 AAGGATGTGTCTGGAGGTTGGACTTTGCTCAGGAACTCGATCTCTGGGTGGCCTTACCTG Gene BVT0102_137298 - 1 EMBV3_14245 GK000005.2:120858590-120908147 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09676 ATTTGCTACCAATTTAAAGAAACAAATCAGTACATTTATTTATGGAGGCCATATTACAGT Gene GeneID:534419|TC2N:XM_002696815:588_cdna Constitutive 0 NULL GeneID:534419 21 GENE TC2N NULL tandem C2 domains, nuclear EMBV3_15613 GCCAAGGACGGATTTGTGCTGTCTGCAGGTCGGTGAAAACAGACTCTCCCAGGGGATTTT Gene BVT0102_148327 + 0 NULL GK000024.2:37556314-37559612 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140164 TCONS_00140161 TCONS_00140163 TCONS_00140160 TCONS_00140162 TCONS_00140165 1 XLOC_085075 Coding TCONS_00140163 XLOC_085075 Coding Coding LPIN2 24:37558576-37649022 j TSS104688 5637 1 TCONS_00140163_4 890 20 0.937895958870032 0.00643246734299893 0.00332756419117951 0.00392282538983557 0.00327852967788385 0.00432393640336754 0.00122643273765651 0.00269833890624095 0.00328600890075081 0.00449044561230012 0.000440472774376278 0.000126058271742983 6.7696393806987e-05 0.000266973783860798 8.48423878081671e-09 7.39002108016777e-08 1.80631726633061e-18 1.99389989448032e-43 1.95020979979058e-38 0.00403907238630154 0.00546789332957135 0.00314099665690996 3.88582359626367e-14 5.77956977648605e-20 7.36034355619416e-20 0.00496849326067814 0.00273658136400391 0.00377525014985899 0.000249785187233585 0.000153877974926674 3.88558719176681e-29 XM_005224287.1 LPIN2 PREDICTED: Bos taurus lipin 2 (LPIN2), transcript variant X2, mRNA. 0.0 9988 100.00 0.982260067411744 XM_005258177.1 LPIN2 PREDICTED: Homo sapiens lipin 2 (LPIN2), transcript variant X1, 0.0 2834 82.73 0.487493347525279 TCONS_00140163_4 sp|Q92539|LPIN2_HUMAN LPIN2_HUMAN Phosphatidate phosphatase LPIN2; 0.0 1578 88.62 0.997752808988764 2 coding 0 0 1 1 0.0202698993985703 0.946796075710826 -0.0275970049835861 0.658883789849027 CATCAGGTGAGGCTACTGGAAGTCTGCATCTATAACCACAGGAGGATCCATGGCGAGGCCAGCATCCTGATCTCGGACTTCTGAAACATCCAGAACCTCTCAAACCATGAATTATGTGGGGCAGCTGGCGGGGCAGGTGATCGTCACGGTGAAGGAGCTCTACAAGGGCATCAACCAGGCCACGCTGTCCGGCTGCATCGACGTGGTGGTTGTGCGACAGCAGGATGGCTCCTACCAGTGCTCGCCCTTCCACGTGCGCTTCGGGAAGCTGGGGGTCCTGAGGTCCAAGGAGAAGGTGATTGACATAGAGATCAATGGCGACGCTGTGGATCTCCACATGAAGTTGGGTGACAACGGGGAAGCCTTCTTTGTAGAGGAAACGGAAGAGGAGTATGAGAAGCTCCCTGCTTACCTGGCCACCTCACCAATCCCTACTGAAGATCAGTTCTTTACAGACGTCGACAGCCCGTTGGTGAAACCAGGTGGAAATGAAAGACCTTCTCAGAGTTCGGACGTTGCCCACATCCTGGAAGCAGAGACAGTCTTCACCCCCAGTTCTGTGAAAAAGAAAAAACGAAGGAGGAAGAAATGCAAACAGGACAGTAAGAAGGAGGAGCAGGCCGTGTCGCCCCCTGCCGAGGACGCCACGGGTGTGGATCTGAGCTCTGATGATGACAAGGGGGCCCAGTCGGCAAGAAAATCTTCAAATGCTTCCTTAAAGGAAGAAGAACATAAGGAGCCCCTGCTCTTCCATTCCGGAGACCACTACCCCTTGTCTGATGGAGACTGGTCCCCTTTAGACAACCCCTACCCGCCGGTGGCCTGTCCTAAGAGCGACTCAGAGCTGGAAGTGAAGCCCGCCGGGAGCCTGCTCAGATCCGAGTCCCACATGGAGTGGACGTGGGGCGGGTTCCCGGAGTCCACCAAGGTCAGCAAACGGGAGCGGTCCGAGCATCACCCCAGGACAGCGATGATCACGCTGTCAGAAAACACCCACTTCCGGGTGATCCCCAGCGAGGACAGCCTCCTGAGTGAGGTCGAGAAGGACGCTTCAATGGGGGAGACGGTCTGCACCATCGTGAAGCCCAAGCCGCGAGCCCCAGGGAAGCAGCATGGTGGGGCAGCCTTGGCAGCAGGCCCTCAGGAGCCCCCCGCAGGGTTGGATGCCCCCCACCTGCCTCCCTCACCCCCCTTCGTGGAGGCGCCCTCGGAAGCTCGACCAGCCGCTAAGGTCGACTCGCCCTCCAAGAAGAGAGGTGTCCACAAGAGAAGCCAACACCAGGGGCCTGATGATATTTACCTGGATGACCTGAAGGCACTGGAACCTGAGGTTGCAGCTCTGTATTTCCCCAAAAGTGAGTCGGAGCCCGGCTCCCGGCAGTGGCCCGAGTCCGACACGCTGTCCGGCTCCCAGTCCCCCCAGTCAGTGGGCAGCGCGGCGGCTGACAGCGGCACCGAGTGCCTCTCGGACTCCGCCATGGACCTGCCCGACGTCACCCTGTCGCTGTGTGGCGGCCTCAGCGAGAACGGAGAGATCTCCAAAGAGAAATTCATGGAGCACATCATTACGTACCATGAATTTGCAGAAAACCCCGGACTCATAGACAATCCCAACCTTGTGATACGGATATATAACCGTTACTACAGCTGGGCGCTGGCGGCCCCCATGGTCCTCAGCCTTCAGGTCTTCCAGAAGAGCCTGCCCAAGGCCACAGTTGAGTCCTGGGTAAAAGATAAGATGCCAAAGAAATCTGGCCGCTGGTGGTTCTGGCGTAAGAGGGAGAGCATAACCAAGCAGCTGCCAGAGGCCAAGGAAGGGAAAGCAGAGGTCCCGCCGCCCAGTGACCGGCCATCAGGCGCCAAGGAGCCAGCCAGTGGCAGGTCGGCCGAGGATGACTCATCGAGTGACGAAGGGTCCCAGGAACTGGAAGAGTCCATCAAGGTGGACTCCGCCCCCACAGAACCCCCAAGCCATAGTGGCACAACCTCCTATAAGAAGTCTCTTCGTCTGTCCTCAGACCAGATCGCGAAACTGAACCTCCAAGATGGCCCAAATGATGTCGTGTTTAGTATCACAACCCAGTATCAAGGCACCTGCCGCTGTGCAGGGACCATATACCTGTGGAACTGGAACGACAAGGTCATCATTTCCGACATTGACGGGACAATAACCAAGTCTGACGCTCTGGGGCAGATTCTTCCGCAGCTGGGTAAAGACTGGACGCACCAGGGTATCGCGAAGCTCTACCATTCCATCAACGAGAACGGCTACAAGTTCCTGTACTGCTCGGCCCGCGCCATCGGCATGGCCGACATGACCCGCGGCTACCTGCACTGGGTCAACGACAAGGGCACCATCCTGCCCCGCGGCCCCCTCATGCTGTCCCCCAGCAGCCTGTTTTCTGCCTTCCACAGGGAAGTAATAGAAAAGAAGCCGGAGAAGTTCAAGATTGAGTGTCTGACCGACATCAAGAATCTCTTTGCCCCAGCTCAGCAGCCCTTCTACGCTGCCTTTGGGAACCGCCCAAATGACGTCTATGCCTACAGACAGGTGGGTGTCCCAGACTGCAGGATCTTCACCGTGAACCCCAAGGGCGAGCTGATACAGGAAAGGACCAAAGGAAACAAGTCCTCGTACCACAGGCTGAGTGAGCTCGTGGAACACGTGTTCCCGCTTCTCAACAAGGAACAGAATTCTGCCTTCCTATGCCCAGAGTTCAGCTCCTTCTGCTACTGGCGAGAGCCGATCCCCGAGGTGGACCTGGAGGACCTGGTCTGAGGTGGCAGCCCCGGCGGGGGGCTGGATCGTGGCTCCCACAGCAGGGGAGGCAGCCGGCCTTCTGCTGGACAGAGGATGCGGGGACCCTCCTGGCCACAGGTGTGACGACGCACTGCCCGCCGGGTGCCGGCAGGGACAGGCTGGGGAGCTGCCGGGGCCGGACGCGCCCCCCCGCACCCTCCTGGGCCCAGGGCTGCCGTGTGGTGCTGGCGGCCAGCGCAGCGAGGGGCTCGGGCCTGAGGCCCAGGCTCCAGTCACCGGCCGGGCCTCCCACATGCTCTGTGTTGAGTTGCGTGCCCGGTGCTCCTTTAATTGCGTAATTTAAGAAGAAGAGAAGAGAAGCGAAGCTAAGAGTGGACCAAGTGTTGCACAAAGTAAAGTGTTCTAATTTCCACTGGGCAGTTGAGAGTGTTTCTCTCTGAGAGGAGGGCTTGCTGTAGGGAATCAGGGTCCAGTTGATGATGTCTGAACCGCCTGCTCACTTCTCCCGTGGGCTCCTCCCTCCATCTCCTACTCCATGGAAGCAGGATGCTGGCTCTGGCGCCCGGGGCTTCGGGGGAAGGAAAGAGCATCGCCTCCTCACCCTGACCGTTCCTTGGCAGGGACGTGTTGTGTCCTGGACCCACCGGAAGGTGTGGGTCTTGCAGGATGTGTGTCATGTCGTGAAGTGGTCTTGGCAGCAGGAGTCGGTTAGCCAGCAGGGAAACTCGGTTCTCAGGGAGGCCTAGAGGTGCAGACGTGCGCTTGGGCCGGGTCCTGGGAAGGTGTCTGTTGCCCCTCCCCATGCCTGCAGCTGAGCAAGCCACCCAGGAAGGGTCCCGTCCACACGCCCCTCCAGGGCTGTGAGCACGAGCCTGCAGAGATGAGCTGGTGCGGACAGCCCCCTCGGGATTAAAATCAAGAGAACTGTTAAGAGAGGAGGCCCTGGAGACCAGTGGTGACCACATGCAGCCCCGCCTTGGGTGAGAAAGCAGTGAGCGCTTCCGGAGTCAGGGAGAGAGGGGAGTGACCCAGTGAAACACTGCAGAGCAGTGCACACTGCTCCCCCCGACCATGGTTTCGGGTCAGCCTTTTGCTTTCCCTGTGCTGTATTTTGGGGGTACTCCTCTTTTCAGTTTGCTCCACCACAATACTGTTCATCTCGAGCTGGAGAAGCGGGGGTGGCTGCTCTCCAGAGTGGAGGGTTGAAGGTCCTGGACTCCACTGAGCCATGTTGGAGGCAGAGCCCAGAAGCCGTGTTCCCAGGGGAACCAGACATGCTTCCCCCTGGACAAACCTTCCCACTGCAAACGGTTCAGGGATGCATCATTTAAAGACCTAGTCACGACCAGCAGGTCCGGAAGCTGGGTTGTGTTCCTCGTGTGAGGTTCTGCCCCGTTAGTGGCAGCATAGTCACCCACGGTTCCTTCATCTCGTGGCTGCCGGTGGCGGCCTGGCCCTCTGCTCGGTGCAGGCCCTTCCCTGGAGCCGCAGAGGCTTGTGTGCGCGTTTGCGGTATGGAAAAGCTTGACACCTGCCTTCCTGTCGTCCTTCATTGGTTGTCCTTTAAATAGAGTCTCTCACGAGACAGTTTCTTTTCCTTGATGAGCTCTCCTCTTGGGACTGGGGCGTCTTAGAGGGTTAAGACGGGGAACCTGCGCTGGGGTGGCCGACCCCTCCGCCCGGTGTCCACCAGCGCTGGAATGTCATCTTGTCCCTGCACATTGATCCGCGGGTGTCACCGGCGCGCTGGGTACCCATGCTGATCAACCTGAGTGTTCTTCCTCGTTTAAAGGAGCCCCTCTTGCTGAACGTAGATGACAACTATCGCTCGAGTGTGTGAAAGTATTGTTTGTGCTGAAAATCCATTGCCATTTGGTACAAATGACATTTGTTCTTTCTGTGAAAGAGAGATGCCCTCGGTGTGTTTGTACACAGACCTCAGGAGGAGAGCTAAGAAGGAGTGGTGGCTGCTCGCTGCTCTCGGTGGCGGGCGACATCTCCAGGAGCCGCGTCTGGGTCACTCTCTCTGCCAGTGGAACGCCGTGGCCCCTTCCCTCTTTCTGTCTCTCCCGACTGCATCCCACCCAATTGTACACCTTCCGCACGTGGAAGCTCGTGCGGCTGTGGTGTCCACATCTGCGTCTCCACGGGGCTCAGGAGGCATGCTCGAGGGCCCAGAGCGGGCAGGCTCGGCCCTGCGTGTGAGGACCACATCTGCTGTGCTGTAAGACAGCGCCTAGTTTTCAGCTGGAAAAAGAAAAAAACTTCCTAGTGTGATGTGAGATGAAAGCTGCTGACAATCCAGGAGTGATAGCCACCCACCGGAGCCAGAAGTGTTCGTGCCCCTGACCGCACGTGGCCCTGCAGACGGAGTGCGTCCTAAAGGGTACTGGCCAGACCCAAAGGAACAGGCCAAGGACGGATTTGTGCTGTCTGCAGGTCGGTGAAAACAGACTCTCCCAGGGGATTTTGTCATCTTTTCTAGTATCATCTTAGTTAACTCTGGGAAGCCTTGAGTTAACTCTTGAGCCTAGAGAAATGCTGGGTTTAATGAAACCAGTGACAAGTTGAGTTTTGGTTTAAAGTAAGTGCTCTTTCCAGGTGAAAACTACTTTTTTGGGTTTGTTTTAAAGGTAGGAAAAGGAAGAGGGAGGGGAAATGTTGCTCTTTTAATTTAATCATTACGTTTGGTCTATGACAACATTTGATTATTAGACACAGCAGTGCCACTAATACGTTTCTTGAGTTGTCAGAAACTGTCAACATCAGTACTTACTTTACGGCAAAGATAACTGAAGATAAATGGCTCATATTTTGGTGCAGTGTTTGATGTTCAAAACAAAATGTTACAACAATAAACAAATGTGAACTCAATG EMBV3_05031 GTACTGCCACCTCAATCAATGCTGTTAGATGCTTTGCAGAGGTCACCTGAGAATTGCTAG Gene BVV0102_219341 + 0 NULL GK000009.2:61836840-61848878 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29800 TTGCTCCCAGGTCCTTGCTTCTTGTCGTCTTGCCTGACTCGGCATCCCCATCCGAAGAAT Gene BVV0102_174034 + 0 NULL GK000023.2:7318841-7321253 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133833 TCONS_00133832 1 XLOC_081230 Coding TCONS_00133832 XLOC_081230 Coding Coding RXRB 23:7320209-7326765 = TSS99884 2643 1 TCONS_00133832_5 532 10 0.598321891685736 3.16535254044319e-05 4.87798385203209e-10 9.7052320249402e-11 1.02294226441898e-10 9.32420384462873e-05 3.15942477045651e-11 1.62779895023196e-05 2.89070971655304e-16 1.02611456359111e-18 0.000605748296699536 0.000567825823096049 0.000159030762845583 3.3653001809403e-05 9.83612654809486e-05 2.6236832780062e-11 0.0026311727876213 8.29354223957768e-09 0.00191837491677268 3.68255788399694e-15 6.06601651745772e-11 4.49626755596229e-17 0.00115942835022169 0.000418507781484664 0.00131300733077451 3.41372168571683e-10 1.18828859111427e-12 3.22818092063085e-05 0.000723507076035383 0.000602553322713014 0.00145114020657668 XM_005223208.1 RXRB PREDICTED: Bos taurus retinoid X receptor, beta (RXRB), transcript 0.0 4733 99.55 0.998108210367007 NM_021976.4 RXRB Homo sapiens retinoid X receptor, beta (RXRB), transcript variant 0.0 2998 84.50 0.998486568293606 TCONS_00133832_5 sp|P28702|RXRB_HUMAN RXRB_HUMAN Retinoic acid receptor RXR-beta; 0.0 851 98.50 0.99812030075188 2 coding 0 0 0 0 -0.0888593273386626 0.533953522423732 0.0230363743743066 0.620710437243071 ATGTCTTGGGCTGCGCGCCCGCCCTTCCTCCCCCAGCGGCATGCCGCAGGGCAGTGTGGGCCGGTGGGGGTGCGAAAAGAAATGCATTGTGGGGTCGCGTCCCGGTGGCGGCGGCGGCGGCCCTGGCTGGATCCCGCGGCGGCGGCGGCGGCGGCGGCGGCCGGAGGACAGCAGGCCCCGGAGCCGGAGCCGGGGGAGGCTGGACGGGACGGGATGGGCGACAGCGGGCGGGACTCCCGGAGCCCAGACAGTTCCTCCCCAAATCCCCTTCCCCAGGGGGCCGCTCCCCCTTCTCCTCCAGGACCACCCTTGCCCCCTTCAGCAGCTGCGTCCCTTGGAGGTTCTGGGGCTCCACCACCACCCTCGATGCCACCCCCACCACTGGGCTCCCCCTTCCCAGTTATCAGCTCTTCCATGGGGTCCCCCGGCCTGCCCCCTCCAGCTCCCCCAGGATTCTCCGGGCCTGTCAGCAGTCCCCAGATTAACTCAACAGTGTCGCTCCCTGGGGGTGGGTCTGGCCCCCCTGAAGATGTGAAGCCACCAGTCTTAGGGGTCCGGGGCCTGCACTGTCCACCCCCTCCAGGTGGCCCTGGGGCTGGCAAACGGCTATGTGCAATCTGCGGGGACCGAAGCTCAGGCAAACACTACGGGGTTTACAGCTGCGAGGGCTGCAAAGGCTTCTTCAAGCGCACCATCCGTAAGGACCTGACCTACTCGTGCCGGGACAACAAGGACTGCACGGTGGACAAGCGCCAGCGGAACCGCTGTCAGTACTGCCGCTACCAGAAGTGCCTGGCTACTGGCATGAAGAGGGAGGCTGTACAGGAGGAGCGTCAGCGGGGGAAAGACAAAGACGGGGATGGGGAGGGTGCTGGGGGAGCCCCCGAGGAGATGCCTGTGGACAGGATCCTGGAGGCAGAGCTTGCTGTGGAGCAGAAGAGCGACCAGGGCGTGGAGGGTCCCGGGGGGACCGGGGGCAGCGGCAGCAGCCCAAATGACCCTGTGACCAACATCTGCCAGGCAGCTGACAAACAGCTCTTCACGCTTGTTGAATGGGCAAAGAGGATCCCCCACTTTTCCTCCTTGCCTCTGGATGACCAGGTCATATTGCTACGGGCAGGGTGGAACGAGCTGCTCATCGCCTCCTTCTCTCACCGATCCATCGATGTCCGAGACGGCATCCTCCTCGCCACAGGTCTCCACGTGCACCGCAACTCAGCCCATTCCGCAGGCGTGGGAGCCATCTTCGATAGGGTGCTGACAGAGCTAGTGTCCAAAATGCGGGACATGAGGATGGACAAGACAGAACTTGGCTGCCTGCGGGCAATCATTCTGTTCAATCCAGATGCCAAGGGCCTCTCCAACCCCAGCGAGGTTGAGGTCCTGCGAGAGAAAGTATATGCATCCCTGGAGACCTACTGCAAACAGAAGTACCCTGAGCAACAGGGCCGGTTTGCCAAGCTGCTGCTGCGTCTTCCTGCTCTCAGGTCCATAGGCCTTAAGTGTCTAGAGCATCTGTTTTTCTTCAAGCTCATCGGCGACACCCCCATCGACACCTTCCTCATGGAGATGCTTGAGGCTCCCCACCAACTGGCCTGAGCCCACTCACAGACGTGCTGTTCCTCATGCTGGGGGAGGGCACAGCGGCGAGGGATTCTGGGCCTTCGGGCCGGGTGGGGAGGGACTGTGTTCCTAGAATCTTGATGGGAAGGAGGAGCACAGGGCAGAACTGAGGCCTCCAGGGGGTGTCCCTAAACCCTGCAAGGGTTTGCTTGAGGTCCCAAGTCAGAGGGACCCAGACCTGGTGGGCCTCTCCCTGCGGCGGCCTCGAGTCTCCGAGTTTGGCTCTGCCATGGTCTGGGGGGCTTTCAGAACTCCAGCCTGGAGTGGCCTCTCCTCCCCCAGCACAAAGCCCTGGCCTTGCTCCCAGGTCCTTGCTTCTTGTCGTCTTGCCTGACTCGGCATCCCCATCCGAAGAATGGAAAGAGAACTCCCGCAGAGATGGACGTTGGGGGGCAGGCCCCCCAAACTGATGGACATGGGAGGCAAGCTCTGACAGGCCTTCCTCTAACCCAGCCTGGCAGATGGGGGCTTCTCTGGAAGGAAGGGACCCTGTCACTGTCTCCTGGCCAGAGTCCTGTCTCACACTTCCCCACCTCCAGCAGTCAGACTGAAAAAGGTGGTGGTGGTGAAGGGGTGGTGGGAACCCATCTGCTATTTTTAATTTCCTCGAGGACAGAGACTTGCAGTTAGACTCAAAGAAGTACTGTACTTCCCCAGGTTGACTAAGAGATGCCAGTGGTGGAGGTGGTGTCTGGGAAAGGCAGGGGCCGGGGTGCTCTGGGTTCTCTGCGGCTCTTATGTCTGTCTTGGGGAAGGGGCCTGGGCTGAGGGCAGGGCCGGGGTGGTGAGTTGTCCTCAGGCCTTTCCCGTTTCAGCTCCCCCTGCAGCCCCGGGCTCACCCCGCAGAGCCTGGGACACTGAGTGTCAGGGCCTGATTGAGGGGAGATGGCCGGCCTGCGGAGGTGGGGTGCTGGGGCTGCATGACTTCTGCCCGGCGGCTCTTCTCTCCGGGGTTCTCTTCCCCTGTCTTTCACTCACATAAAATCGCTTTCAAATTAAAATCGCTGTTTTCTGGACCGA EMBV3_04701 TGTGTGCATGAGTCCATGTGTGCGCGTGGTGGGGGCTCTAACTGCACTTTTGGTCTTCTT Gene GeneID:535369|E2F1:XM_002692439:443_cdna Constitutive 0 NULL GeneID:535369 13 GENE E2F1 NULL E2F transcription factor 1 EMBV3_00458 GACCTGGCGAGGAGGCTGATGAAACTGTACCAGACGCCCAACAACATTGACATCTGGATA Gene GeneID:511206|MPO:NM_001113298:21_cdna Constitutive 0 NULL GeneID:511206 19 GENE MPO NULL myeloperoxidase EMBV3_25666 CCAGGAAATCCGGCGACCCTGAAACTGTGGCAGGAGGAATATAGGGAGTATATGAACAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11769 CGGAGGTTGCAAAGGAGCAAGGATGGGACCACATTCAGACCATAGACTCCTTACTGAGAA Gene GeneID:615842|LOC615842:XR_084732:162_cdna Constitutive 0 NULL GeneID:615842 X PSEUDO LOC615842 NULL similar to AMME syndrome candidate gene 1 protein EMBV3_40596 TATTACGTGGAGCCCGATGACCCTGAGCCTGAGCCCCAGGTTCCTTCTGACGGTTCGAAA Gene GeneID:789809|MGC157368:NM_001083801:67_cdna Constitutive 0 NULL GeneID:789809 18 GENE MGC157368 NULL hypothetical protein LOC789809 EMBV3_20401 AAGGTGAGAAATATACCTTCTGTCTTTTGTTTAGTGCCCCTATCATGTCTGGTGTGCCTT Gene BVV0101_020454 + 0 NULL GK000007.2:46076067-46082729 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00312 TTTTGACAGTGCCTGCACAATGGGCTCCTACCACCCACTCCTGTTTGAGAAGAACATGGT Gene GeneID:100336374|LOC100336374:XM_002685018:177_cdna Constitutive 0 NULL GeneID:100336374 1 GENE LOC100336374 NULL ST6 beta-galactosamide alpha-2,6-sialyltranferase 1-like EMBV3_03201 TGCATCCAGAGCATGACCCGCCTGGTGGTGAAAGAACGGAATCGCAACAAACTGACTCTA Gene GeneID:538801|SEPT4:NM_001034651:39_cdna Constitutive 1 NULL GeneID:538801 19 GENE SEPT4 MGC127947 septin 4 EMBV3_38101 CATGGTACACAGGAGGATATGCGGAGGTTAGATGCATATACAGAAGGCCCTCGAACTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09808 TTTTGCAACCGTCGCCAGAAGGGCAAACGATCAAGCAGTGACTACTCCCAACGTGAGGAT Gene GeneID:282316|POU5F1:NM_174580:45_cdna Constitutive 0 NULL GeneID:282316 23 GENE POU5F1 OCT3 OCT4 POU class 5 homeobox 1 EMBV3_22563 CTACAGGATTCATGGTCGGTTGGATCCCAGGATATGGAACCACAGATACAGAGAGCTGAC Gene BVT0102_061724 - 0 NULL GK000004.2:47508672-47597269 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181497 TCONS_00181495 1 XLOC_110623 NonCoding TCONS_00181495 XLOC_110623 NonCoding NonCoding - 4:47476050-47557631 - TSS135828 1726 5 TCONS_00181495_1 69 0.575898030127462 3 0.978879627359647 5.37250880179596e-94 0.00125531623300377 0.000464537376521249 7.42769702004153e-05 0.000200832018942098 0.000287218862732988 8.76799843353919e-06 1.77601486833832e-05 1.89247912532657e-10 1.82100260739057e-11 1.73788895779095e-06 0 0 0.000310681452340245 0 0 0 0 0.000249169488063296 4.37294110777063e-05 0.000666838104893839 4.29934445142783e-06 0 0 0.000182531581947985 0.000147579091627128 0.000176608301665133 0 0 0 XM_005220527.1 UTP18 PREDICTED: Bos taurus UTP18, small subunit (SSU) processome component, homolog (yeast) (UTP18), transcript variant X1, mRNA. 2e-25 122 73.13 0.128621089223638 NM_182493.2 MYLK3 Homo sapiens myosin light chain kinase 3 (MYLK3), mRNA. 7e-06 57.2 77.11 0.0475086906141367 0 noncoding 0 0 0 0 0.00246275876881485 0.983736760103391 0.0211134033193909 0.764320594746293 ACCACGCACAGCGTCTGAGTTTAATTTGGAGATGGTGAGAATTGGCAGTAAAATGGCCAAAGTTGCTCTTTGAAAGGCGTCCGATCCTGGATGATAGGAATGCTGTTTTGGTCAGAAATCCAAAGATAAAGGCCGGCGCTCCCTCTTTTCTTGTGGACGCCTGTGGCTTCTGATGTCGTATTTGAGCACTTCAGAGACTCTAGTGGTAGCGTTCACTTCTCTGTGGCCCCGGGAGGCAGCAGCAAGGCCATTCCCACAGCTTAGCAGGAACAAAGGTCGTGACAGAGGGTTTTCTTGGAGAGACTCATGGCAGAAATTCAGCAGTGGACATTCCCATTTCCTGACGGAATCTGCAGTGTGCACGCCAGAGGCCAGTGGTTAAGGCAACTCCCACACCCAAGGCAGGACAGCGTGGTGGCTAAGAGTACAAACTTCGGAGCCAGACCGCCTGGTTTCCACCCCTGTTCTTCTACTTCCTGAATACCAGCTGCCTCTGACTTTCAACTGTGTCCTTCACAGCTTTTTGGGATGTGTACAGGGATTCTCCGACTCAACATGTCCACAGCCAGATGCCTGATCACCTACCTGGCCCTCCTAAGAGCCTTCCCCACCACAATGAATGGCAACTCCATCCTTTCAGTTTGCTCACTCCAGATGCTTCCTGCCTCCTCTCTCTCATGCTTTGTATCCATCCAACTAGCTCAGCTTCAACGTATAGCTGACCCTTGAACAATGTGGCGGTTAGGGGTGCAGGCCCTCTGTGCAGTCAAAAATCCACATTATAACTTTATAGTCAGCTCTCTGTATCTGTGGTTCCATATCCTGGGATCCAACCGACCATGAATCCTGTAGCTCTGTAGTGTTTACCATTGCATATAACGGACCCAAGCAGTTCAAACACACGTTGTTCAAAGGTCAGCAGTGTAGCCAGGATTGTTGCACTTCTCACTGCTGCTACAGCCCTGTTCTGGTTGCCATAGTCACTCATTTGACTTTATATAATAGGGCTCTAGTGGTTGTTCCTGCTTCTGTCTTTACAGTTGGTCCCTCCTTTTCACCTCTAGGCTGATGCAGTCAGAGTGACTCCATATTCAAAACCACACCATGGATCTCTGTTTTTCAAGTCAGAACCAAAGTCTTTATAGTGGCCTACTCCCCCTGACCTTCTACAGCTTTCCTTGTTTCCTCTGCTCCAGCCACTCTTGACACCCCTGTGAAGCTGGAACACATTAAGGCTGACTCTGCCCCAGGACCTCTGCACTGGTTTTTTTTCCTGCCTGGACCACTGTTCCCTCAGGTATCTGAAGAGCTCCCTCCCTCACCCTCTTTGCTTAAACATTACCTTCCCAGGCAGGTCTACCATGGCCACTCTATTCAAAGTGGCAACCTTTTACATTCTGGATCTTCTTTACCCATCTCCTCACCCCCTGCCCAGTTTTGTTGAGATATAATTGGCATATATCACTGTAGAAGTTTAAGGTATACAGCATAATGGTTTGACTTACGTATATACTGAAATGATTAACTCAGTAAGTTTGGATGGCATCATCATCTGATATATCAAAAAGAGAAAATATAAAAAGAGAAAGCAGAAAAAGAAAAAACATTTTTTTCCTTGTGATGAGAGCCCCTAGGATTTCCTCTCAACACCTTTACTGTATGTATGTCATGTCATACGACAGTGTTAACTGTAGCCATCATGCTGCACATCCCTGCCCCTGCCCAC TCONS_00183888 r 5' 21956 TCONS_00183888 r 5' 21956 EMBV3_31523 CCTCAGCAGAGTGAAGTCTTTGTCTTTGGTGATGAGAATGGGACTGTCTCCCTTGTGGAC Gene GeneID:512993|WDR77:NM_001015584:92_cdna UTR3_Alt 2 NULL GeneID:512993 3 GENE WDR77 MEP50 WD repeat domain 77 EMBV3_31921 TGCCACTCGAATACCATCAACCATTTCTACTGCGATGACATGCCTCTTCTCAGGCTCACC Gene GeneID:100300488|LOC100300488:XM_002693685:335_cdna Constitutive 0 NULL GeneID:100300488 15 GENE LOC100300488 NULL similar to olfactory receptor 154 EMBV3_07544 CATGGAGAATGTGACAGTGCTGGGCGAGGATGTCATCGTCAACGACGAGCTCTACCTCAA Gene GeneID:514161|AMIGO3:NM_001046168:157_cdna Constitutive 0 NULL GeneID:514161 22 GENE AMIGO3 GMPPB MGC134517 adhesion molecule with Ig-like domain 3 EMBV3_30438 ATTTGGGGCTGGGGCAGGGGGTCACCGCAGGACGAGATGGTTGAATGCTGTATTTTTTAA Gene GeneID:282024|TWF2:NM_001105324:43_cdna Constitutive 1 NULL GeneID:282024 22 GENE TWF2 MGC148415 PTK9L twinfilin, actin-binding protein, homolog 2 (Drosophila) EMBV3_37953 TTCCAGCCAGGCCTCCTGACAGTCCGTGAAACTGCCATGATTTAGAGAAGCCAGTGAGCA Gene BVT0102_191358 + 1 EMBV3_37095 GK000004.2:8568525-8844553 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183118 TCONS_00183117 1 XLOC_111084 Coding TCONS_00183118 XLOC_111084 NonCoding Coding MTERF 4:8784110-9107705 j TSS136732 1204 2 TCONS_00183118_2 109 0.292358803986711 6 0.996297829996848 0.000230265874741106 0.000346240083390277 0.00015615575354174 1.70058583178012e-05 7.04836358044246e-05 5.77596437420196e-109 2.74872898565351e-05 0.000156633668599226 0.000140489132113906 0 6.22571199480646e-151 3.17264224867708e-265 3.07684664481515e-256 0 5.45345034919954e-05 6.89412470326167e-05 0 3.9116975350606e-206 8.76044546515082e-67 0.000160623714844846 6.10417797309832e-05 2.61255743333749e-05 0.000531320923497798 0 5.87401077017342e-05 0.000187823179071758 1.39030720426538e-112 5.67451105437884e-294 4.43500983459528e-06 9.54667675337059e-241 XM_600466.6 MTERF PREDICTED: Bos taurus mitochondrial transcription termination factor (MTERF), mRNA. 7e-23 113 100.00 0.0506644518272425 NM_022905.4 TTC23 Homo sapiens tetratricopeptide repeat domain 23 (TTC23), transcript 2e-24 118 74.23 0.1578073089701 0 noncoding 1 1 1 1 -0.0981913711669973 0.4865723168367 -0.014380677064225 0.767493266061546 ATGTCTGGGCTTCCCGTCAAACCAATTAAATCAGAATCCCTGGGGGTGGAGAGCTGGGCTTTGGAATACTTAAAAAGCTCCCGAGGGGATGCTAATGTGCAGCTAGCATTGACAACAGCAGGTTATGAGGGATACAGAGGTGAAAAGCTCAAGAGTCCAGCTCACAGTTATTTCTGTCCACTTACGTCCCTCTGTTTCTCGCGAGACTGCAGAGGTGCCAGGAAAGGCTTTTCCCCGTGCCCTGTTTTATTCCAGGTTGAGGGACAACTGTTTTCCCGCTTTTCTGGAGGAACGCAAAGTCCTTTTTCCTTAAGACAGATGAGATGTTGAAGCCCTAATCGTCAATGCGATGGCATTTGGAGATGGAGCTTTGGTATGTAATTAAGTCATGAGAGTGGAAATCTCCTGAGTGGGATTAATGCTTCATACGAAGAGACAAAAGGGAAATGATCTCTCTCTGCCACATGAGGATTCAGAAGAAGGCAGCCATCTGCAATCCTGGAAGAGGGATCTCACTCAATACCTTGATCTTGGACCTTTCAGTCTCCAGAAGTGTGATAAGCCATCTTTCTGCTGGGTGACTGGTTCTGAGCAAGGCTACCGGTGGGAGACAACATCTGAAGCATATCCAGACTATGCTATGTTACTACAGGAACTATAGCCTCACCTTTGAAAGACTGAGGGTTAGTCCAATCATGGTGACCCATCCTGTTTCCCAGGTGATTGATTCAGGTGGTTTAAAAGCCACGTTCAGAAGCCTTCCCTCTTCCATGCACCACTGACAGCCAATGTTTCCAGTCTGACTCAGAGAGCCACCGTCTTTGTGGAGGTCGCCATGGCACGGGCTGGTCTTCACTGGCGTTCCCTCCTGCGCGAGCTCTGCCAAAGACGCATCCGCAGGGGTGAGCTAGAGGACACGCGAGGCGTTTAGAAGTCAGGGTTCCAGCCAGGCCTCCTGACAGTCCGTGAAACTGCCATGATTTAGAGAAGCCAGTGAGCAGCAGAAACTAAAAGCCCAGTTGACGTACATTGCTGCAGAGTTTTCTGTCAAACAATGTTGTTTTCTGACAACAACTTTGAAAAATAGACAGAAGGGCCACCCAAGAGGAATATGCATCAACGAGAAAAAGTCTATACCAGATAAGAAACGAGAGATAGTAAAAAAGGACTAAGGTATCTTTCGGAGTTAGGAGAATAAAACATT EMBV3_05589 TCTGTGGACATTCCATATGAACACACAAAAGTATCATAGACGTCGTAGGAAACTGAATCC Variant GeneID:614148|MRPL42:NM_001037622:43_cdna 434^597 1 EMBV3_24261 GeneID:614148 5 GENE MRPL42 MGC133556 mitochondrial ribosomal protein L42 EMBV3_15498 GGAGAATCCCAGGGACTGGAAAGCAAAGTAGGAAGCCAAGAAATACCTAGAGTAACAGGC Gene BVT0102_319516 + 0 NULL GK000007.2:106009691-107153810 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218276 TCONS_00218275 TCONS_00218279 TCONS_00218278 TCONS_00218274 TCONS_00218277 1 XLOC_131667 Coding TCONS_00218276 XLOC_131667 Coding Coding - 7:106940793-106946982 - TSS162316 3481 2 TCONS_00218276_10 180 0.796610169491525 3 0.437944408532644 0.000623948904381098 6.35061624562839e-05 0.000313956807363714 6.4135994880242e-13 7.2938428983652e-05 5.65469201166512e-11 8.2780206177405e-05 8.92666039626206e-08 0.000246653517302825 0 6.57601064149552e-06 0 2.89246943063767e-05 2.29214904053357e-105 6.3100938837179e-05 1.34335639165977e-11 0 0 0.000184105348442737 0.000244452680678815 8.47605942902449e-05 0 0 0 0.000504406925942575 1.19846889646403e-09 0.000446511486056403 0 3.48480593244034e-12 2.78517538152374e-12 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 940 86.90 0.223211720769894 TCONS_00218276_4 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 9e-45 156 68.18 0.768115942028985 0 noncoding 0 0 1 1 -0.00432203762561387 0.967239938990535 0.0268002241180752 0.645360269305377 CAATTTAACTGAGTGTTCACACACTCATTTCCTCTGTCACGTTTGACTCTGTGACCCCATGGACTACAATGCACCAGGCTCCTCTGTCCATGGGATTTTTCAGACAAGAAGCCTGGGAAACTCCAGGAAAAAAGCCAGCATTTCTGATGCCCCATCTTCTTTCAACCCAGTGAGACCAAGGTTGGACCTCTGACCTACGGAATTCCGTAAGCTTTTCACATAAAGAGAGGAGAGCTGAACCCCTTCCTCATCTATGCAGCCTCAGTGCTTTCAAAAAAGCAATTTTAAGTGTGTCACAAGGTCAACTGTGAACTATAAAGTAGTAAATCCACATTTTCCCAGCTTAGTTTCATTGCAGAATTACATGCTTTCATATGTGAAAAAGCGAAGAAAAGGAGAAATAGCATCTGCTCAGCTTTAGGCCTGATTAAGGGAAATTAGTTCCATCAACATATGTAAATGCCGATTACTTACCTAACAGAATCTTAGAGCAGTAAAGAAGCATAAATGTCAGCTTATACAAACTGGTCTCGGTAGTCTGAGTTTGTATGCTATCATCCTAAGTGGTTTACTCAAAAGCAGCCAACTGCAGACAAAACTGAAACTTGAATACGTGTTTTATTATAACTTAATGGACTAAGCATCTCTAATATCTGCCTGCTCAGTGTCAACTTATTTGTGGAACCGCCCCTATTCTACACGTGTTTCTGATTTTCTACCAGAGAGCCTCAGATGCAGACAACGTTCCTAGGACATTAAGTTTTCACTTGAGGCATTTTTCTTTAGGGAAATTTTCTCAGTAGTGATTTACTGGGAGAGCAGTCTATTTGAACTTATGTTATGGCAGCATCTTGAAAACACTTCTCATGAGCCACAGCTATTGAAAACTGAGTCGACACGTTTGCCTTTTTTGTTGGTTTGGAGGTGAAAGTTGAGTTTTTTCATTAAGCCTGATATCAGACATAGATTGCACAGAAATTTTTTTTGTTAAGAAAATTGTCTTCATTCCCAAATTACCTAGTGCTCTTCTTCATTATTAGATGTTGGCTTTTGATAAAAAATCTTTTTTATTCACCATTTGAGATGATCATGGAGTTTCTCCAGGTTGGTAGGTGCCCAATTGCTACTGGAGATCAGTGGAGAAATAACTTCAGAAAGAATGAAGAGATGGAACCAAAGCAAAAACAACACCCAACTGCGGATGAGACTGGTGATGGAGGTAAAGTCCAATGCTGTAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAGGTGGTCAAACAGGAGATGGCAAGACTGAATATCGACATTTTAAGAATCAGTAAACTAAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGTGGGCAAAAATCCCTTAGAAGAAATGGAGTAGCCATGAGTCAACAAGAGTCTGAAATGCAGTGCTTTGGTGCAAGTTCAAAAAGAACAGAATGATCTCTGTTTGTTTCCAAGGCAAACCATTCAATATCATGATAATCCAAGTTTATGTCCCGACCAGTAATGCTGAAGAAGTTGAAGTTGAATGGTTCTATGAAGACCTACAAGACCTCCTAGAACTAATACCAAAAAAAGATGTCCTTTTCATTATAGGGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCACGGACGGAGGAGCCTGGTCAGCTGTAGTCCATGGGACCGCTAGGAGTCGGACATGGCTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGAAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGACTGGAAAGCAAAGTAGGAAGCCAAGAAATACCTAGAGTAACAGGCAAATTTGGCCTTAGAGTACAGAATGAAGCTGGGCAAAAGCTAATAGAATTTTGCCAAGATAACGCACTGGTCATAGCAAACACCCTATTCCAACAACACAAGAGGAAACTACACTCATGGTCATCACCAGATGGTCAAAACTGAAATCAGATTGATTATAGTCTTTGCAGTCAAAGATGGAGAAGCTCTAACAGTCAGTGAAAACAACACCGGGAGCTTATTGTAGCTCAGATCATGAACTCCTTATTGTCAAATTCAGACTTAAATTAAAGAAAGTGGAGCAAACCACTAGACCATTCAGGTATGACCTAAATCAAAACCCCTAGAATTATACAATGGAAGTGACAAATAGATTCCAGGGATTAGATCTGATAGAGTGTCTGTAGAGTTATGCACGGAGGTTCATGAGATTGTACGGGAGGCAAGGCTCAAGACCATCCCCAAGGAAAAGAAATAAAAAAAGTCAAAATGGCTGGCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAACAGACAAAGGCAAAGGAGAAAAGGAAAGATATACCCCTTTGAATGTAAAGTTCCAAAGAATAGCAAGGAGAGATAAGAAAGCCTTCCTCCGTGATCAATGCACAGGAATAGAGAAAACAAAAGAATGGGAAAGACTAGGGATCTCTTGAAGAAAATCAGGGATACCAAGGGAATATTTCATGCAAAGATGGGCACAATAAAGAACAGAAATGGTATGGTCCTAACAGAAGCAAAAGATATTAAGAAGGGGTGGCAAGAATACTCAGAAGAACTATATAAAAAAGACCTTCACACATGGTGTGATCACTCACCTAGAGCCAGACATCCTGGAATGTGAAGTCAAGTGGGCCTTAGGAAGCATCACTACGAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGTTATCTCAAATCCTAAAAGATGAGGCTGTGAAAGTGGCATACACTCAGTATGCCAGCAAATATGGGAAACTCGGCAGTGGCGACAGGACTCGTAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAGGAATGCTCAAATACTGCACAATTGCTCTCATCTCACATGCTATCAAAATAATGTTCAAAATTCTCCAAGACAGTCTTCAATCATAATGAATGGTGAACTTCCAGATGTTCAAGCTGGATTTAGAAAAGACAAAAGAACCAGAGATCAAATTGCCAACATCCATTTGATTATCGAAGGAGCGAGAGAATTCCAGAAAAACATCTACTTCTTTATTGACTATGCCAAAGCCTTTGACTCTATGGGTCATAACAAACTGTGGAAAATTCTTCAAGAGATGGGAAAAACAGACCATCTAACCTGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGCACATGGAACAACAGACTGGTTCCAAATTGGCAAAGGAGTACATCAAGGCTGTATATCGCCACCCTGCTTATTTAACTTCTATGCAGAGTACATCATGAGAAATGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGATTACTGGGAGAAATATCAATAACCTCATATATGCAGACAACACGACAC TCONS_00218280 s 3' 242919 TCONS_00218280 s 3' 240007 EMBV3_39599 ATTTGTTGGAGGCAGTGGTAGGTGCCAAGCTAAGATCCCTGCTGCCTTGCTCTCAGTGTT Gene BVV0102_275850 + 1 EMBV3_41930 GK000018.2:61592569-61608933 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091649 1 XLOC_056422 NonCoding TCONS_00091649 XLOC_056422 NonCoding NonCoding - 18:61595059-61595251 - TSS68995 192 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00185516820641678 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0456603323372423 0.6824951197732 -0.0393997274013341 0.501200275059283 CAGGGAGCGATTTGTTGGAGGCAGTGGTAGGTGCCAAGCTAAGATCCCTGCTGCCTTGCTCTCAGTGTTGAAGAGGATGGGCACAGGGCATGCTGGGAGTTGTAGTTCCTGCAGAGCCAGCAAAAGACAGAGAAAGGAGTGAGAAGAACATGACTTGGGCTCCTTCACTGAGCTGACCTGTAGCCCTGCGGA TCONS_00087470 TCONS_00087471 . 5' 2492 TCONS_00087470 TCONS_00087471 . 5' 2492 EMBV3_02296 TCAGGACTGCTGGAATTCTTACTGTTGAGGTTGTTAGTAAGCTGTAAGCCTGGAGCTGCC Gene BVV0102_310866 + 1 EMBV3_31300 GK000025.2:26529681-26530296 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146632 TCONS_00146633 TCONS_00144877 TCONS_00146634 2 XLOC_089162 XLOC_088678 Coding TCONS_00144877 XLOC_088678 Coding Coding HIRIP3 25:26523322-26530264 j TSS108685 4834 1 TCONS_00144877_10 544 0.0736450144807613 10 0.304999279642703 0.00126713019671179 0.000585401636024264 0.000867473974684549 0.000711555782549389 0.00050153913174303 0.000224982085003613 0.000503826024673223 0.000639956479691425 0.000759381310384177 0.000464366258911887 5.70574161612079e-06 5.89838601709389e-05 3.85181088887304e-05 0.000225189217070249 0.000344525462679582 0.00039392363103472 3.85157990363128e-50 0.000913197907615697 0.00101972710169891 0.000758981346797826 0.000384111533280695 1.23590762377239e-05 4.40232813081588e-05 7.31812844151355e-05 0.00126672323418112 0.000480507648803852 0.00105184873336059 3.49975708364509e-60 8.61433440315415e-06 0.00015058557138401 NM_001192296.1 HIRIP3 Bos taurus HIRA interacting protein 3 (HIRIP3), mRNA. 0.0 4706 100.00 0.539511791477038 NM_003609.4 HIRIP3 Homo sapiens HIRA interacting protein 3 (HIRIP3), transcript 0.0 1914 74.12 0.616673562267273 TCONS_00144877_10 sp|Q9BW71|HIRP3_HUMAN HIRP3_HUMAN HIRA-interacting protein 3; 0.0 623 70.28 0.998161764705882 0 coding 0 0 0 0 -0.29550259279741 0.249917015938527 -0.0095458421809328 0.867492632568124 CTGCTTTCCAGATGCAGTCCCTGAGGCTTGGAAATGAAGGTGTGGGGCTGGAGCTTGTACCCAGGTCTCCGGCTCCTGACCATTTTATGCTCTTATTTGCTTCTGAGCTGTCTAGCACTTACCTCTACTCCACTCCCCACATCCAGGCTCCTGGTAACGTGCACCTTAAATATTACCTTCACCTACTGCTCCCCATTCCAACTGACACCAGGCCAGGCCACCACCATGTCAAAGCCACCTGCTCAGGACTCTCACCACTCCTGCCAGTCTGTCCTCCCCAACCCCAGCATGACCCAAAATGTAAAACTGATCACATCCTTACTGAGCTCTGCCAGCATTTGAAATGCTTCTTATTATGGCCTCAACTTACCTTTCTGGTCTCCCAACCACACTGTATTCACATCACACCAACCTGTTTTCTCAAAGCTGAAAGTCATTCCCCAGGTTGGGTCTCTATCAAGAAGGCCCATGGTTCACTTAACAAGTAACTACTTACAGGTGAAATATACTATTCCCACTTGCTCTGCTCAGATATCCTTTAAGCAGCAGATTAAATGCCACCTCTCTGAGAAGTCTCCCAGAATCCCTCAGGCCCAGCTGATGGCTGATTCTTCCGTAACTCTCTATTCTCAATAGTCAGGGCCCTCCTTGCTGTGCCAGGCAGTGTCATGTGTGGGTGTCTCCCTCACCACACTGTGGGCTTCTCTGAGGTATAAAGGTGGCTTATATCTCTGGCTCTTGCTTCTCAGATATATCCCACTCTGACCATGAACATGCTGGGTTCCCTCATGCTGCCTATCCTGAAGTCTCCCTCGACAGGATGTTAACTGAGAAGTCTCCCTCAACAGGATGTTAACTGAAAGACCTCCAGGAAGGAACAGGAAGGCAATGAGAAACTAGAATAAAAGCGGAATGTTTTGCCACGAGAATACAAACTCCAAGAAGTTTCGTCTCTCTTGGTTACCACTGCATCCCGTGTGCAAAGCTCAGTGTCTGAAACACAGTAGATACTCAGTAATACTTCAGTGAAAGAAGAGCAGAGGAAGAGGACCAGCAACTAGGCTGCCCTGGCCTCCAAGGCCTAAAGGGAGGGCCCAGGAAACTTGCTGGAGTGCCAGGAGCATGTCCTCCACCAATTTTTCATGACCTTGCTCACCAGAAGAGTCTTCATCCACGTTCTCGTACTGCAGAAGTCGGTCTAGGAGGAAACTGAGGGAAGAGACCAGGAGAACAAGAGTGGTTATTCCCATCTCTGCAGTGTCCTCCGGGCCCTCGCCTCATCTAGCCGGCCTCATGCATTTGTGGCCCACTCCAGGATGGGGTCCGAACGCAGAGCCACAGGAGCCACATCACCCTCTGGCTTCCCTCCTTCCCCCAACGTGTCTCACCTCTTGTCCCGGGACACTTTCAGCAATTTCCTCTGCGCCTTCCTCAGTTCCTCCTGGAAGCACTCGTGTTCCTGTACCACGGGCAAGATGCTCGCTGAGCCAACCACAGTAGTAAATTGGGCCTGGAAGCCGACCACAACTCACCCTGCTCCCTTTACACACAGTCCACTTCACCGTCTGCCGGTCCGTTCATGACCGGCTCCGGGAGAAGCGCCTCAGCTGTAGTCCGGAGTCCCGCTACGCCGAGCCGGTTCAGCCTGGCCTCTCCCGCCTCAACTTCCGGGGACTCCGCAGGGCTGGGTCCGCTGGCACTACAACTCCCGGCGTGCTCCGCGCTCAGGGATCTTAACTACACGACCTGCTCTCCGGAGCAAAACCAAGAAAGGAACGTTGCTTCCAGGCGAAAGATGGCGCCGAATCGAAGCGTGATGTCACAAAGATGGAGGACGCTGGAGGGCGCCCTTAACTGATTCGAAATGTGCTTAGCGATTTGAAGTCACAAGAAGACATTCCCCCCTGAGATTCCTAGTCTTCAGGCGAGGACGCCCTTTTTCGTCTGTCTTTCAAAGTCACAGAGGCCTAGTTGTTGCCCGCGACCACGAACGGAGGGAGCGTCGCGGTTTGATTACGTTACTCAAAGGTGTAGCCGGCTCCGAATAGGTTTCTAACGAGAACTTTAAAAAGCGATTCCTTCTAAGAAAAGGAAGGGGCCACGAGACCCTCCAACTGCCCGGCAAAAACAAGTTTTGTCTGGCAAATTCAGCCCAAGCGGCGCGCTACCGGCCCGCAACGGTGTCCTGCCTCACGGCGTCACGGCACTGGGCGTGCGCAACCTCCTGTCAAACGCTTGGACGGAGGCCGGGAAGAAAAAAGGCGGGAGCCGCCAATATCAGGTGGAGCAAAATGGCGCGGGAGAATGAGATGCAGGAGTTCACCCGTAGCTTCTTCCAAGGCCACCCGGACCTCAGCACGCTTACGCACTCCATCGTGCGGCGGCGATTCTTGGCTCACGCGGGCCGCGACCACCTGGAACCTGAGGAGAAGCAGGCACTGAAGCGGCTGGTGGAGGAGGAGCTGCTGAAGATGCAGGTGGATGAAGCGAGTGCGAAGCAAGAGAGGCTCCACGTTGGCAAAAAGGCGAAAAGGTCTCCTGCTCCTTGCCGTGACCCAGAGAGAAAAAGGTTCCGTTTCAATTCAGAGTCAGAGCCCAGCTCTGCAGCCTCCAGTCCAGACCGCCTCAACCCCTCAGCAAAGAATGGGATGGCAGCAGATGTCACTCCAGCCGAGGATGAGAGTCCAAATCAAGCCTCAAAGAAAGCAACTGAGAGCAGTGATGATGAACAGCAGAGGGACCTGACTGCAAAGATCAGATTAGAGAAGGAGGAGGAGGAGGGAAAGGAGTCCAAGGGCAGGACTAGGAAGAAGCCTGGGACAAAGACCAAGCAGGCACCAGGCAAGGCCTCAGGCAGTAGGAAGCAGGCTAAGGAGGAGAGTGAGGACAGTGAGGAGGACCCTGCCCAGGGGCGGGGAAAGAAAGGCGCTAAGAGCCACCAGGGAAGTGCAAAGGAGAGTGAGGAGGAGGAGGAGACAGTAACCAAGAATAAAGAGAACAGAGAGGAAGAAGAGGATTGGAAACCCACAGACCAGAGCAGTGGAGGGAAAAGGTCAGTTCGGGAGGAGAGGAGCTGTAAGCAGAAAAGCAGGGCAGCACGACTGCTGGGAGAGCGGGGGGACAGAGAGGAACAGAAGGAAAAAGCCGCAGCAAGCAGTGGCGATAGCAGTGAGGAAGATGAAGTGCCCCTAGTACAGAGGAAGCGCAAAGACAGGACCCAGGGGAAGGATGGGAAAAGGCAGAGTGGAAGCAGCGAGGAGGATGGAGAAGACAGCCCGAGGAAAGTGAAGCCAACTACTGGCAAGACAGCCAAAGAGGGCAGTATCAGTGGTGAGGCAAGTGACTCGGAGAAGGAAGTGAGTGATAGCGAGGCAGAGGGGAGCCCCAAGAAGGAGAGGAAGAACCGGTCTTCCAAGAAGAGCTCCAAGAAAGGCAGGACACGAAGTCCCTCCTCCTCTTCCATAGATGGCAGTCCAGAACATAAAGGCAGGAAGGCTGGCTCTGGTCGCTCTGGTGAGGACCACCCCGCTGTGAGGAGGCTCAAGCGCTACATCCGGGCCTGTGGCGCCCATCGAAACTACAAGAAGCTGCTGGGTTCCTGCCGCTCACGCAAGGAACGCCTGAGTGTTCTCCGGGCAGAGCTGGAAGCCCTGGGCATGAAGGGTAACCCTTCCTTAGAGAAGTGTCGGGCCCTGAAAGAGCAGCGCGAAGAGGCAGCCGAGGTGGCTTCTTTGGACATTACCAACATCATCAGCAGTTCAGGCCGGCCACGCAGACGCACAGCCTGGAACCCTTCAGGAGAAACAGCCCCACCAGGGGAGCTATACCGCAGGATCCTCGACTCAGACGAAGAGCGGCCCCACCCCCCGCCCCCAGACTGGTCACATCTGCGGGGCATCATCAGCAGCGATGGCGAGAGCAACTGAGCTCCCCCAACCCTAGGAGGGACTTTCCTCTGGTAGAAAGCATATACAGCATTCCTCTCACCACAGCCCCCAGCTCTGCCTACGGAGCAGAAGCAGCTTTCTTCAGAGGACCCGCAGCCCCCACGGACACAACCTGTTGGGATTCTACTTCTCAGTCTCACATTCTCAATTTAAGGTGTTTACAGGGATTTAAAGACTCAATAAAGGAGTGTTTGAATCACCTTGTCAAAACTGGTCCCCACTCTTAACCCCTGTCCAGGAAGCTGAGGAGCAGCCAACTGTCCCCTGGTCTGATTCCCTTTCTCTGATTTTCCAAAAATCCCAGCCTCCAGACCCTACCATCCAGTCTTGACTCGAGGAGTGTGACTGCTTCCTCCAGCCTGATCAGTGGGCCCCTCTGACCACCCTGCTTTTTAGCTGTCTGATAACCTAACGCCTTGCTGGGAGGAGGATCTGAATAACTGGCCTTAAGAAGAATGTGAAACAAGAATGAAAGGACTGGGGAACAGCTGTTGTTTATGTCTTTCTTCTCCCTCCTGGAAACAGCCACTTAGTTCATGGGCTGACTTTCAGTCTTTAAAGGGGTGGGTACAAGATCTAAACCTGACCAATTGGAACACCCGAGGCCTCTGGCTTCAGATCAAACCAATGGAGTCACTTCAGGACTGCTGGAATTCTTACTGTTGAGGTTGTTAGTAAGCTGTAAGCCTGGAGCTGCCAGGGGCTTGTGGGTGAGGTGAACTTTCTGAAGCCAAAGCAAAGGGAAGCAGAGGTCCAGGGACTGATTGCTTCCTCGGAAGACCTAGATTCAGTCATGTCCAAAGTCAATGAAATCACTGAAATTTTTAGTTATACAGTCCAGTGAGTTCAAGTAACACTATCACCTGCCACCGAACATTCCTTCACAC EMBV3_11504 TGGATCATCTGTATAGCTGCCGCTTTGGTACGTTCTTATACAACTGTGAATCTGCTCGCG Gene GeneID:533622|MTM1:XM_002699667:23_cdna Constitutive 1 NULL GeneID:533622 X GENE MTM1 NULL myotubularin 1 EMBV3_30553 CACTGCCTTGGTGACTTGGGTTGAGTTATGTCTGTTAGAGACCTGTCTTTCTTTAATCCT Gene BVT0102_191552 + 1 EMBV3_40911 GK000029.2:27222076-27234897 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43773 TATAAAGGCAACAGGGATTCCCCTCACCCTTAGGGCATACTACTGCAGAACCGCAAGATG Gene GeneID:515501|ARHGAP20:XM_002692973:34_cdna UTR3_Alt 2 NULL GeneID:515501 15 GENE ARHGAP20 NULL Rho GTPase activating protein 20 EMBV3_01468 ACGGTTTGGGCTTCTGTCCCTGGCTTCCTCACTGTAGACACACCTACCTCACAGCATTTT Gene GeneID:281606|ADRB3:NM_174232:23_cdna Constitutive 0 NULL GeneID:281606 27 GENE ADRB3 NULL adrenergic, beta-3-, receptor EMBV3_24317 GGGAACAATGAAGTGCTCCGTTTACCCGTCCTGCCACACTCGGTGTTCTCTCAGCTAATT Gene GeneID:516048|GIT2:XM_002694529:464_cdna Constitutive 0 NULL GeneID:516048 17 GENE GIT2 NULL G protein-coupled receptor kinase interacting ArfGAP 2 EMBV3_09192 ACTGCCTGGCCTACAGCAACTCCTCCGTGAACCCCATCATTTATGCCTTTCTCTCCGAAA Gene GeneID:539429|GALR1:XM_002697646:35_cdna Constitutive 0 NULL GeneID:539429 24 GENE GALR1 NULL galanin receptor 1 EMBV3_02709 TGCAAAGGGCTGTACCACATAGCCCACCAGCTGAGACATGCTACTTCCTGTGTTTTCGGA Gene GeneID:100138350|ASH2L:XM_002698734:199_cdna Constitutive 0 NULL GeneID:100138350 27 GENE ASH2L NULL ash2 (absent, small, or homeotic)-like (Drosophila) EMBV3_08707 TCGAGAACTACAGCAACCTGGTGTCCCTGGACTGGGTGATTACACCTATGAATAAGAAAT Variant GeneID:525942|ZNF454:XM_002688487:64_cdna 193^282 1 EMBV3_15715 GeneID:525942 7 GENE ZNF454 NULL zinc finger protein 454 EMBV3_07845 CTCAATACTCCAAGTGAGAAGGTGCAGGCGCCTCCTGCCGAGGCGGCCAAGTTTGACAAA Gene GeneID:100337146|LOC100337146:XM_002698586:185_cdna Constitutive 0 NULL GeneID:100337146 26 GENE LOC100337146 NULL mKIAA4201 protein-like EMBV3_21338 CCTCCTCACTACCTCTGAGGATGCTGATGAGCCTCATGGTGGAGAGTCACCACTCGCTCA Variant GeneID:530855|GALK1:NM_001099381:419_cdna 302^963 2 EMBV3_10880 GeneID:530855 19 GENE GALK1 NULL galactokinase 1 EMBV3_19595 GTGATTGCTAAACCTCAATCAGATTCTGCCAAGGCCGTGTTCCATACTTGATCACTACTG Gene GeneID:540224|RND3:NM_001099104:133_cdna UTR3_Alt 2 NULL GeneID:540224 2 GENE RND3 MGC148524 Rho family GTPase 3 EMBV3_22239 TACAGCTGCAATCAGAGTATGAACCTCAAACGCCACATGCTGCGGCACACAGGCGAGAAG Gene GeneID:100138621|ZNF513:XM_002691455:292_cdna Constitutive 0 NULL GeneID:100138621 11 GENE ZNF513 NULL zinc finger protein 513 EMBV3_34841 CTGGAACTTTTACTTGCAGAGCCGGAGAAGAGTAAGCGAAAGAAGCAGTGTGTGGCCTAG Gene GeneID:786914|MGC152337:NM_001099201:348_cdna Constitutive 0 NULL GeneID:786914 21 GENE MGC152337 NULL similar to RIKEN cDNA 1700001K19 gene EMBV3_29708 TCAAAACCAGAAGCTCAGCGTTTGCAGTTCCAGCCAGGGAGAATCAACTGGGAGACTGCT Gene GeneID:617726|LOC617726:XM_002696521:138_cdna Constitutive 0 NULL GeneID:617726 21 GENE LOC617726 NULL similar to mCG13840 EMBV3_07522 TATCCTCTTAATGTTCCCCAGCTCTCAGGGATAGTGTGAGGGCCGTGCTGAACCCTGGAT Gene BVV0102_098703 + 0 NULL GK000015.2:41107848-41241521 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20424 AATAGGTTATCGTGCCCTCTCCAGGGGATCTTGCCAACCCAGGAGTTGAACCCATGTCTT Gene BVT0102_257642 + 0 NULL GK000007.2:100565698-101017892 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214745 TCONS_00214744 TCONS_00214740 1 XLOC_130758 Coding TCONS_00214744 XLOC_130758 NonCoding Coding - 7:100851500-100956974 - TSS160546 892 3 TCONS_00214744_2 65 0.659192825112108 2 0.991561821508822 0.000915090157375367 2.97623041355111e-09 0.000604137945874737 0.000118637410855332 0.000275402210022598 2.94365025519772e-15 0.000186399111877343 3.29603841162055e-05 7.8821504117938e-05 0 0 0 1.44450559315754e-102 0 0 0 0 0 0.000337230105576336 2.75581394294549e-08 4.36217759388668e-05 0 0 0 0.00032011670467709 3.55523031272379e-15 0.000453116866503776 0 0 0 NM_001102510.1 LRRC30 Bos taurus leucine rich repeat containing 30 (LRRC30), mRNA. 4e-87 325 75.78 0.524663677130045 0 noncoding GCTTCCTTTCAGGGTACAAGGGTGAGGCAGAGTCAGTGTCTCAGTGGTGTGCGTTGTGAGATGGACTCTCTGGCCGTGACTTGCTTTGAGGCTTGGGGAAGGGGAAAGAACCAACCTCTAGAAGCTGGAAAAAGCTATAAGACGGACTTTTCCCTCGGACCTCCAGGAATGCCTGCAGACCTGCTGCACATGTTGGTTTTTATCCCAGTGAGCTCCATTTTGGACTTCTGACCTCCAGAACTGTAAAGTGGAGTCGCTCAGTCGTGTCCGACTCTTGGCGACCCCATGGACTGTAGCCTCCCAGGCTCCTCCATTTGTGGGATTTTCCAGGCAAGAGTGGAGTGGGTTGCTATTTCCTTCTCCAGAGGATCTTCCTGACCCAGGGATCAAACCTGGGTCTCCCACACTGCAGGCAGACTCTTTACCATCTGAGCCTCCAGGGAAGCCCCAGAACTGAAGTATAGAAACTTTACTACAATAAAAGATACTGGGAGGAAAAAGCAACGTATGCTCAGTCGCTTCAGTCATGTCAGACTCTTTGCCACCCTATGGACTGTAGCTGACCAGGCTTCTCCGTCCTTGGGATTCTCCAGGCAAGAATACTGGAATAGGTTATCATGCCCTCTCCAGGGGATCTTGCCAACCCAGGAGTTGAACCCATGTCTTGTATGTCTCCTGCATTGCAGGCAGATTCTTTACTGCTGAGCCACCATGGAAGCCAAATAAAGCAGAGACTAGAAATTTTTAGGGGAAAGAATGATGAATGAAAAACTTTTTTTCAAGTTAGTATTTAAAGTGTTGGAATGAAATTTTAAAATCTTGGACAATTTGTTGCTTATCATAATATGTTAGAGGGCTCATCAAATTATTTATCACTGAGAAATAAAAGCAG TCONS_00218188 TCONS_00218189 TCONS_00218190 r 5' 284752 TCONS_00218188 TCONS_00218189 TCONS_00218190 r 5' 284752 EMBV3_32048 GACACCCTAGGAACCATGCAGATTCATTTCACAAAGCAGTATTGGAATGTGGGAAGGGGG Gene GeneID:515903|FOXP1:NM_001083689:44_cdna Constitutive 0 NULL GeneID:515903 22 GENE FOXP1 MGC139185 forkhead box P1 EMBV3_02908 GAGCCGAGCCGCCTCTGCTTTTCGCTCTAGTGGCTAAGTTGAAGACCTGCCATGACAATG Variant GeneID:534013|TMEM68:NM_001076009:41_cdna 124^335 1 EMBV3_33286 GeneID:534013 14 GENE TMEM68 MGC140559 transmembrane protein 68 EMBV3_20076 TCTGCCCAGAAATCCACCTCAGTATCTGAAGTTTCCCTCTGTCTCCTCCTCTAATTAAGC Gene GeneID:506056|EID1:NM_001098377:35_cdna UTR3_Alt 1 NULL GeneID:506056 10 GENE EID1 NULL EP300 interacting inhibitor of differentiation 1 EMBV3_05574 TCACCTGCGCCCCCGCGGGGTCCGCGCTGCACTCCTTCGCCATCACCCTCTGGCAGATGA Variant GeneID:444869|MOS:XM_002692654:78_cdna 142^896 3 EMBV3_22535 GeneID:444869 14 GENE MOS C-MOS v-mos Moloney murine sarcoma viral oncogene homolog EMBV3_40859 ACTCATAAGTAAACGATATTTCCCAGACACCCTTTGGAATGTTTGTTTTTAATCAGTGGG Gene BVT0102_379053 + 1 EMBV3_36333 GK000019.2:22842390-22856303 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092740 1 XLOC_056964 Coding TCONS_00092740 XLOC_056964 Coding Coding FAM101B 19:22830134-22844971 = TSS69712 4251 1 TCONS_00092740_1 347 0.0926840743354505 6 0.713871663521165 0.000672257662647883 0.000829128349078399 0.000654342800196396 0.000400354252937828 0.000299706108047293 0.000119084952708494 0.000339514488747019 0.000252978378117276 0.000631857038928904 4.94575839270239e-05 1.49322575567498e-05 1.47933781632321e-05 0.000159413204248267 6.79432498830745e-05 0.000130008304867786 0.000260232361226878 7.74082776338645e-05 0.000125874927083347 0.000352736144388887 0.000560345926885367 0.000117978482058275 0.000118333012570088 4.29098110853515e-05 0.00021212253230134 0.000516676024105865 0.000441105109579235 0.000480180578058985 3.13464763208246e-05 3.06407312342636e-05 2.52431746988465e-05 XM_002695711.3 FAM101B PREDICTED: Bos taurus family with sequence similarity 101, member B (FAM101B), mRNA. 0.0 7162 99.90 0.935544577746413 NM_182705.2 FAM101B Homo sapiens family with sequence similarity 101, member B (FAM101B), mRNA. 0.0 827 76.33 0.264643613267466 TCONS_00092740_1 sp|Q5SVD0|F101B_MOUSE F101B_MOUSE Protein FAM101B; 3e-90 274 80.00 0.46685878962536 1 coding 0 0 0 0 0.0677989475552427 0.52897813797528 -0.00779316939864819 0.907070878989122 ATGGCCCAGGGCTTTGTTACCCACAGCGGTGACGGCTTGGCCACAGCCTCTGAATGCCTGGTGGAGCTGATGGTGGTCCTGTTGGAGGGCACTGTCACCCAACTTAGCAGAACCAGAGGCTGGGGCAACCCTGCGGGGAGAGGCCTCAGGCCAGGAGCCAAGTCCTACAAGGACACCGGTCTGTGTGATCCAGGCGGGGGCGATGGCCGCTCTGAAAGGACAGCTTTGAGAAGAGGCTACTCTTCAAGCAGGGTCCGTGGTGTCATTCTGGCTCGAGATTCTAGCGTCCGTCGGCCCGGCTGGCCCAGGCCGAAGGGACAAGGCGCCCGTGGGCCCGGTGCGAGCGGGGTGTTGTGTCCGCCTGCGGCGGGGCGGACGGCCGGGTGGGGCAGGGGTCCCGGGCCGGCGCCCCCGGAGCCTGAGATCGGCCGCTCGCGGCGGGCTGAGCGGCCAGGCGGAGGGCAGTGCGGGCGGCGCACGGCAGGAGCGCAGCGGCCCCTGGCGCCCGGCCTGGCGGCTCAGCCACCGCGGGCGGGTCGGGCCCGGGCGAGGCGGGCCCCGGGGACACTGGAGCCAGACGCAGCGGCCTCCCGCGCGGCCCCGAATCCAGCTTCTCTCCCCAACCCCCTGGGCTCCGGCTGCTCACCAAGGTTATGCCCCCTGTCCTTTGGCGAAGGAGTGGAGCTTGACCCCTTACCACCAACAGAAGTAAGGTACACGTCCTCAGTCAAGTACGACTCAGAGAGGCACTTCATTGACGACATCCAGCTGCCCCTGGGCCTGGCAGTGGCCTCCTGCAGCCAGACCATCACCTGCATTCCCAGCAGCACGTGGCGCAACTACAAGGCGGAGGTGCGCTTCGAGCCCCGCCACAAACCCACCCGCTTCCTTAGCACCACCATCGTCTACCCCAAGTACCCCAAGACTGTCTACACCACCACCCTGGATTACAACTGCCGCAAGACACTGAGGAGGTTCCTGTCCAGCGTGGAGCTTGAAGCCACAGAGTTCGCGGGCGGTGATTACCTGTTGGAGGAGAACTGACTGGAGCGGGCTCCGGGGGGGCCGGCCCCCTTCCCCAGGCCGGTCTGGTTGGGCCAGGCAACCCTCGCATGTCCTTCTAGCCCCAGAACAGTCTAACCCAGAGATACCTCTAAGCCCAGCCTGGGGAAGAAAAGAAAATGTCACAGTAGCTTCTAATTATCCAGCGAATTCGGTTTTTACAGTTTTTTTTTCCAACTGTGTTTAAAGGGAGTATATTTCCTAATTTGCTGCTACATAGCTTCCCCGAAGTCTCAATTTGATGAGAAAATCAAAGAATGGCTTAGAGCGAAAGGAAAATGCCCCACACTTTGAAATAGGGAGGAGGGGGAGCGCTTCCCCCATTGGTCAGTCTGTTTAAGGAAGAGCATGGGAAAATCTCCCTGAGATGGAAAAAGTGAGTTTGAAGAAATTTCAGCCCCGGGTGTCTTCACTACTACAGAAGTGGTGCTAATTCAGTGAGCTGTGACACCCATATGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCTGTTTTTTTTTTTTTTTTAATTTCTATTTGTATTTCCTGTTAACTATAACTCTTTGGAATTCTCTAAATCTTTTTTTGTGATATGGGAAAAAAAACCCAAATCACAATATAAGATGCCTTTCAAAAAAGAAAGAAAGAAGGAAAGAAAAGGTTCACCCTATTCTTGCCTCTACAGTGGGGTCAGGTCAACTGGTGGCTGAGTTTGGGGGTAACAGGTTGGTTCCAGTTCCTTCCACTGTGGGTTCCAAGCTTGGTTCCAAGCAAAGTGCCTTGAACCTTTGGCATCTGACAATGTCTTCACTGGGGCTTCCTTGGTGGCTCAGTGTGTAAAGAATCCACCTGCCAATGTAGAAGACTCAGGTTCTATCCCTGGGTCAGGAAGACCCCTGGAGAAGGAAATGGCAACCTACTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGACTGATGGGCTGCAGTCCATGGGGTCACAAAAGAGTCGGACACGACTTAGCAACTAAACAACAATGATGTCTTCACAAGCTTGTTTAACTCTTCCTGATATGAGTTTTGGGGTTTCCAAATACTTTCCTAATTTTTTCACCAGGCAAAACATAGCAGAGGCACCTTTGGAGAGAAACAGCATTTTGAGAGAATGCTTAGGGAAAACACTTTTGGGGGAGTCCACGAGGGGGACTTTACTCACAGTGGGAGCCAACAGCTATACCTAAGGCTTGATTCCCACTGGGAGATAGATGTTTCTAATGATCTGGTTCATCAGGGTGCGTGTCCTTTCCAGCGACCTTGGGTCGGCATTGCAGAGGAATTTTGCTGGTGCCTGAGCTCTAAGCTAAAAAGCAAGGAAATCTGCCCCCCACCCCACCCCCAACCCAAGTGAAATAAAGGTGAACTGAACATCGGGAGTGATGTCACAAGTCAAACTCCAAAGCCCGGGTGCCGTGGTGACTGTACATGTTCAAGTGTTCCTTTTAATGTGACAGTCATGGCATTGAGTGTGAATGGAAGAAACTGTGAATTTAGCTGATGGGGCCCCACAGAAGTAGGGACACAGGCTGGGCCAGACCAGGAGGGCACGGAGGCCAGGCTGCCTCTGGCCTTCAGCCTCTTGCCTGCCCTGCTTCACACCCAACCCCGCCCTGCCTCACCTGGTCCTGACTTTTTCCTGCTGCCAATCCCCGTGGATTTTGAGTAAAGACGGTGGCAGATGGCTTTTGCTCTTCTGGTATTGGAGAGAACAAAAGCGTGGGTATTTCCTTTGCATCCAGGCGATGTCAGGTGCTTGCAGTCCTGGAAGCCTGCACTCCCGCTGTATCTCCGGGTTTGTGCTGATGGCTTCCATCTGTCCTGAAAGCGGAATTGAGGGCTCGGTGGGTACCCTGGAGCCACAGCGGGACTTCTGTTCAAAGGAGAGCAGGTGTGACGATAATCACTGTCATTTGAAGTCATCAGAGGCCTAGCGGGCTAAATGGTCTGCTGTCTTTCTCAAATTTAACAGCAGTATGTCCAATTGTGCGCCTGACTAGAAGCATCCCTTCCGTGGAGCGTGCAGTCGGCTCCATGGCCCCAAGTTTGCCACCATGAAGCTCAGCAGGGGTCCCTCAGGGGGCACCCCAGAACCCCATAGTCTCCTGTCATCATGCAGAGCAGCAAATGCCTCCTGCTTTTGGAAGAGTGACACGGCATTTATGAATAAAAATGGCTTTTTCTCTCTGACTTCATAAGCTTGTCATGTAAGACAAGTGATAAATGTAATTTTTAAACTATGGTAAGAGAATTCCCGTGGCTTTCTTGGTGGCTCAGTGGTAAAGAATCTGCCTGCCAGTGTAGGAGATGCAGGTTCAACCTGGCTCAGGAAGATCCCTTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGGAAATCCCACTGACAAAGGAGCCTGACAGGGTATAGTTGCAAAAGAATCTGACATGAGTTAGCAACTAAAACAACAATGAGAAAGAAAATTCCAATTGCTCTGGCCCAATGGAGACACATGACGAGCTCAGGATAATGTCGTGGGCAGCACGACTGGAAAGACCAATGGGAGGGAACGTCATCTTTGAACGCGGCCCTTTGTTGAGATGCACATGTGAGGTTTTTTGATATGAAATACGTCAGTAAAGTAAGTAGAAGTGAGTGCCTGTGGATGTGTCGTGTGAATGGAAAAGCAGATTTTGATTTTGTCATCCACCAGGGACCCAACTGCAATTTTCTCGAATCCTTTTTTTTTCTCCAAATCTGCTTTGCTGAAAGTTGCAAAAAAGGAAGCAGGTGAAGATGTAAATTGAATGTCATCGATCAGTGGTGGATTCATATTAGTTCTCAAGGTGGAAGTGATGATTTTTAAAACCCACTGATTAAAAACAAACATTCCAAAGGGTGTCTGGGAAATATCGTTTACTTATGAGTTAAAAAGTCTCTTTTCTCGGACTCTTAAATTTAATCTTTTGTGTAATAATGATCTATATATTCAGAGAAAGGTTTTCTTTTGAAATCACAGGCATTTGAAAAAGATTAAGTACCTCTTCATTTGATACATTTCCTGTTTCTAACCTTAGGAATAGTATTTGATGAAAACGATATTTTAAATTTATGTTTGACATCTGTTCCCCTCCATTTTGCTTTATGACTTCTTCATTTAATAATAAATTACCTTAAAAAAAACTCA EMBV3_00662 CAGAGAAAAGTAAGTAACTCCTGGAAGAATAGCAGCTCAGCAAATGATGGACTGTTTCAG Gene GeneID:100125774|STK32A:NM_001105047:2_cdna Constitutive 0 NULL GeneID:100125774 7 GENE STK32A MGC148827 serine/threonine kinase 32A EMBV3_14260 GAAGAGGTACTTCCACGGAATCCACGTCTACCTGAGAGAGAAGGAATATAGTGACTGCGC Gene GeneID:509166|LOC509166:XM_002689552:37_cdna Constitutive 0 NULL GeneID:509166 8 GENE LOC509166 NULL similar to interferon-tau EMBV3_05002 AAGGCAAAACAAGTGAAACTTGGCATGGAGGCAAGAAGGGGTTAAAAGTGGAATGTATGT Variant GeneID:533374|GGCT:NM_001037610:19_cdna 322^409 1 EMBV3_10954 GeneID:533374 4 GENE GGCT C7orf24 MGC133989 gamma-glutamyl cyclotransferase EMBV3_39069 ACGACTACGGCGAGGACCCCACCGTCCGCGGTGCACTTGCTGGCCCAACGCTATGGGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34291 GTGCCCATCTTGGGCCTGGGCACCTGGAAATTGTGGCCCACCTTCATGGAGAAGCATCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23122 GAGATCCTGGGAGAATTAGCATTCCAGTACACCTCATCCAGGTGCTTTCCTCCATAAAAC Gene GeneID:517846|FCRL1:NM_001102045:2_cdna Constitutive 0 NULL GeneID:517846 3 GENE FCRL1 MGC148384 Fc receptor-like 1 EMBV3_33289 AGATGGAATCCCCTTCTTTCGCTCTACCAATGGGGTGATCCTGACTCCAGGGAATGCTGA Gene GeneID:510729|TRPT1:NM_001034392:577_cdna Constitutive 1 NULL GeneID:510729 29 GENE TRPT1 MGC128502 tRNA phosphotransferase 1 EMBV3_06668 ATGTGCTCAGTGCCACACAGTGGAGAAAGGCGGAAAACACAAGACTGGTCCAAATCTCTG Gene GeneID:781996|CYCT:NM_001077963:47_cdna Constitutive 0 NULL GeneID:781996 2 GENE CYCT MGC127738 cytochrome c, testis EMBV3_15629 GCACAGAAAAGCCTTGTACTACTATCCCATTCGTGGATTTTTGGAGGAAATTGACTATAC Gene BVV0101_053587 - 1 EMBV3_40021 GK000003.2:111281052-111380890 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174760 TCONS_00174759 1 XLOC_104680 NonCoding TCONS_00174760 XLOC_104680 NonCoding NonCoding - 3:111294376-111296628 - TSS129613 2252 3 TCONS_00174760_1 64 0.289520426287744 1 0 0.000273215187429947 0.000686508945020218 0.000420633374390913 0.000176321152659359 9.20787590089836e-05 0.000260496174000625 5.25912467753872e-05 2.22136608773364e-09 0.000185120632849456 0 3.55006703252493e-05 0 8.91423682014713e-06 3.55096631085413e-05 4.35175803907315e-05 1.12829890266825e-08 9.58392085652843e-05 0.00027853685921048 0.000140106720362156 0.000638323186713153 0.000338731389173818 0.000373278723794375 0.000411446116027983 7.55022136902042e-05 0.000119985242004425 0.000631159190934447 0.000446820348753248 8.53034882274863e-06 2.08264926128956e-09 0.000114798602269189 XM_005204944.1 LOC101907642 PREDICTED: Bos taurus transmembrane protein LOC653160-like (LOC101907642), mRNA. 8e-108 396 100.00 0.0968028419182948 NR_037869.1 LOC653160 Homo sapiens uncharacterized LOC653160 (LOC653160), non-coding RNA. 2e-109 401 69.19 0.41607460035524 0 noncoding GTGGTAAAACAGGGAGTGTTACAAAGTTGTTGATTGGTATGTAATTGGTACCCCATTTTTGGAGGCAATTTGGTGATGTGATTAAACAACTTGAGTGCACATACATACTCCTTGACACAGCAATTTCATTGCCAGGGATTTATTCTATAGATTTACAAGTATGCAAAGATTTGTGGACAGCGACACTCATTGCATCATTATTTATCACAGTAAAACAGTAGAAACAAATGCACATTAACAGGGGGACCAATTGAGTAAAATAAATACTTTGCTTTTATTCAAAAAATGAGGTTGATTGATATGTGCTGATATTAACAGATGTACAAGATATATTAAATGAGGAAAGCACAGAAAAGCCTTGTACTACTATCCCATTTGTGGATTTTTGGAGGAAATTGACTATACATGTATTTGTACTGAAATAGAAAACCTCTGGAAAGATATACACCACAAGAAACTGTGAACAGTGGTTACCACTGGGGGACCTTTATTTTCTATTTTGCATTTTTCTCTAGTACTTTGAATTTATTTTTATGAATGTGTATTACTTTTAAAATGCAAAAGAAAACATTTAAATAAGGAATAAAGGACCAATGAAAGGTAATTTATCAAAAATAAAAGAAGAAATTTCTCAAATTTACTATTAGAAGGCAAATTCAGTAATAGGACTGGAAGTCAGTATGACATGGTGGCTGATCGGTGAACTTGTCCTGACCCAGCTGACTTGGCAACGTGAATATGCTGCCCTCACTCATTAAACTCGAGACCCAAGCAGTCTTGCTATGGAGCCCCCAGTAACATGGCTGAAGAGAGGGAGAGGTTCCCTTTCCCACTTGAAGCCAACTGCTAAGTCATCAAGGCACAAGGAGAGAAAGAACCAGAGGCCAGAACCATTGGCAGGGATTTGCACCGACAGTCTCTCTGCTCAGCTGAAGCTGAAGGCAGCAAGTCTGGCCAATCCCTCTCCCAGGCAATAGCAGGATGGATATCCAGCTTGGTTATCACCAAGTCTTGGCCCTGGAATCTTGGCACATTGGAGGTGATGGACGAGTTGCAGATAACCAGCAACAGCAAAAGGAAGCAATCATCAGTACTCAGTCAGGAATGCATCTGGGTAATATAAGCTTAGAGAATCCCAGAAACACTTGAAGAAAATCTGAGACTGGAGTGTCTGAATGAGTCCTTGGGCATTTTAAGCTAATGATATTCACGTTTCATGCATTCATCTGACATACTGAAGTGTTACTACGTGCAAAGAACAGTAGCAAGCAGTAAATAAGGCAAACATGGAATTCATTAAGTTGAACTGGATAAAAATAAAACTGCCACTATTCAACCTTTCTGGGTCTAAAAAAATGGCACTTTCTTATGGATCAACATAAACACATTCTGAAAAGAGAAAGAACTACAGGCAGAAAAACCAAGAAAAAAAAAAAAAGAAAGAACTATCCAGTTAATTGATTGCAATTATGGAAAGACAAGGGAGCAATCATATCTAATCCAGTCTAGGGTAAGGCGTATGTGGTGCTGATCAAGAAAACTTCCACCTTTGAGGAGGTGATAATGAAAAGGAATTAATGAAGGAGACCGAGGGACATCATTCCTGGCAATCAATTCCAAAGGCCTTGAAGGGCAGGAAACTGGTCTGTTCCAGGGACTGATAATGTGACTCAACCCACGGGGACGCAGACGTGGTAGAGAAGAGGGAAGATGCAGATGAGAGGATGCGGAGAGTGAAGCTGGAGCCAGTCAGGCCTTGGAGGACCTTTTAAGGACTTTGGGGTTTATCCCAAGAGATTTTAAAAACAATGGCATACTATGCGTATCCAAACAATGGTAAAGTCTAGGGAACTTTCCGCTTACAAAGTTTTCCCCCTTTTGGCAGAGCCTGGAGGTCTACAGTTACAGGCGGCTAGTCTGTGGCTGTGTCAGAATTGGAATCCACGTCCTTGCAAAGAGCTTCCACCACCCAGGACTCGGCTGGGAGGGTGGCAAGGGTGAAGCAGGCAGTGGGCCAGGGACCCTTCTAGGAAGAAGCCAAGGAGGCCGAGTGCGCCCCAGGTGCCCCCACCCCCAGACGGCAGCTCAGCGCCCAGCAGTCCCGGCGGAAGCGGCGCACCGAGAAGCAGTAGATGAGAGGGTCCAGGCAGCTGTTGAGACTCAGCAACGCCAGGCTGAGGGTGTGCAGGACGTCGAGCGTGGAGGTGGCCCGGCATCCGCCGCCTTCGCGGCTCGCGGCGACCTCCTGCCCC TCONS_00171348 TCONS_00171349 TCONS_00171351 r 3' 12076 TCONS_00171348 TCONS_00171349 TCONS_00171351 r 3' 14327 EMBV3_18632 GAAACCAAGAGTCTTCTCTGGAAGCTGAAGGAGATGCTCCAAGCAGCTCTGACGAGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24469 CTTCCCATGAGGACATGATTCATGACGCCCCTGGACCTGTGACGATGCCTCGGGCAACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21657 TAAAAGGCTCCCCGTCGTCTCACAGATACGCCAAAGATCGTCACTCAGACATGGAGCACA Gene BVV0102_405318 + 1 EMBV3_26173 GK000023.2:49303205-49386707 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21463 GGATCATCTTAGCCTATGAGGTAGAAGCCACATGTTGAGGATTTCAAGAGCCTGGGTTTC Gene BVV0102_085422 - 0 NULL GK000007.2:89785762-90097692 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42731 TGCACTCACACGACGTGCGCTACGGATCAGGAAGTGAGTGCTTTTGGTGAGGAAGGTGAA Variant GeneID:508463|SDF2:NM_001034321:79_cdna 182^378 2 EMBV3_40369 GeneID:508463 19 GENE SDF2 MGC128631 stromal cell-derived factor 2 EMBV3_12039 AAGGTGGCTACCTCCCCCACCCCGCCCCTCACCAGAGCTGCCCTAAGGAAGGAAAAATAA Gene GeneID:282146|ATP2B4:XM_002693900:236_cdna Constitutive 2 NULL GeneID:282146 16 GENE ATP2B4 PMCA4 ATPase, Ca++ transporting, plasma membrane 4 EMBV3_02379 ACTGTTCTCGGTCCTGGGATACAAGTGTGAATAAGAGCGACACATCTCCTGCCTCGTGTC Gene GeneID:100296971|LOC100296971:XM_002698641:23_cdna Constitutive 0 NULL GeneID:100296971 27 GENE LOC100296971 NULL hypothetical protein LOC100296971 EMBV3_41198 CTCAGTCTCGCCTCACCTCTTAACTGCTGCTTGTGCTGGGACATTGTTCTTTGTGGCCAA Gene GeneID:280894|PGF:NM_173950:8_cdna Constitutive 0 NULL GeneID:280894 10 GENE PGF MGC137394 PlGF placental growth factor EMBV3_32173 CTGTCAACAAGCAAAAGCTGGAGAAGGCGGAAAATGAAGCTCTGGCCATGCGGAAGCAGT Gene GeneID:533949|BCAP31:NM_001014941:64_cdna Constitutive 1 NULL GeneID:533949 X GENE BCAP31 NULL B-cell receptor-associated protein 31 EMBV3_08536 TCTCCTCTTGCAAAGACCCGTACATCACAGGTGTATTACCTGACTGCTTAACAGATGGTT Variant GeneID:513777|CCDC104:NM_001034453:101_cdna 394^508 3 EMBV3_10567 GeneID:513777 11 GENE CCDC104 MGC128282 coiled-coil domain containing 104 EMBV3_28613 TACACAGGGCAGATCTACTGGGCCCCCGTCACTCAGGAGCTGTACTGGCAGATTGGCTTT Gene GeneID:514502|PGC:XM_002697292:98_cdna Constitutive 0 NULL GeneID:514502 23 GENE PGC NULL progastricsin (pepsinogen C) EMBV3_41432 CACTAAATTACACCTGGTGGAAGTTCTCACTATTCGCTTGCTGGGGTCGGAACTGATGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15336 CACTATTTCTGTGACGTGCTTCCCCTGCTCAAACTTGCCTGCTCTGACACCGTCCTCATT Gene GeneID:540128|LOC540128:XM_002693720:433_cdna Constitutive 0 NULL GeneID:540128 15 GENE LOC540128 NULL similar to olfactory receptor 1269 EMBV3_30855 ACAGTATCACCACAGCAAGCCATCGACAGCCTGAGGGACCTGAGAGGATCTGGAGCGATA Gene GeneID:615282|CDKN3:NM_001040582:134_cdna Constitutive 2 NULL GeneID:615282 10 GENE CDKN3 MGC133531 cyclin-dependent kinase inhibitor 3 EMBV3_33652 TGGAGTCCTTGGTAAAACCTCAGGCCAAGAAGAAAGCTGCAGACCAGGAAGAGGAGAGCT Gene GeneID:507102|SREBF2:XM_002687950:39_cdna UTR3_Alt 2 NULL GeneID:507102 5 GENE SREBF2 NULL sterol regulatory element binding transcription factor 2 EMBV3_10921 CCTCAGGACCTTCTGCTGCCTTTCTTGCTGTTTCATGAGCTTCAAAGCCACTTGGTTGAG Gene GeneID:616421|FAM89A:NM_001101257:111_cdna Constitutive 0 NULL GeneID:616421 28 GENE FAM89A NULL family with sequence similarity 89, member A EMBV3_18074 GAACTGAACAGTTTGAACCAGAAATTAGAGAAACAGGCACAAAGTTACCACACTCAGCTA Variant GeneID:537776|LOC537776:XM_002698993:27_cdna 534^647 2 EMBV3_15742 GeneID:537776 29 GENE LOC537776 NULL hypothetical LOC537776 EMBV3_42763 CTATGACATGCTACATGGGAAGATAATTTCACAAACTGTTTCACCTGGTTACATAGCTTG Gene GeneID:526026|ZNF711:XM_002699948:34_cdna Constitutive 2 NULL GeneID:526026 X GENE ZNF711 NULL zinc finger protein 711 EMBV3_40324 GGCAAGAATATTAAGGCTCTCCGTACAGACCATATTGAGTATCAGTGCTGATATTGAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11779 GCTGTGATGCTGCTCCCATCCTGAAGATTACTTGCTCAGACACAGAGTTCCTAGAGCGAT Gene GeneID:529303|LOC529303:XM_002687433:200_cdna Constitutive 0 NULL GeneID:529303 5 GENE LOC529303 NULL similar to olfactory receptor Olr879 EMBV3_37349 TTCATGCTTAACCAGTACACGAAAGCATTTGTTATCATCATCGAGCCCTTTTTTGACTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04145 AATGTACAAAAGTCTGGCGAGTCACAGCTTACTCTGCCGTTCGTAGCAAGGTTGAACTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17434 GCAGAACCTCTGGGCCATATTCAGTTTCCAGACAAGACTTAGAGACCTTAGGCCAGGAGA Gene GeneID:618512|HN1L:NM_001081546:309_cdna Constitutive 3 NULL GeneID:618512 25 GENE HN1L NULL hematological and neurological expressed 1-like EMBV3_17978 TTGGAGGTACTGACCGATGCTGCCGCCAGGATCGAACGCCTGCGAGAAGAGGGTTCCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32154 ATGAAAAAGCCAGAGGCTGTGAGATGGGAAAAGCTAGAGGGGCAAGGAGATGTGCCTAAC Gene GeneID:515509|SUGT1:NM_001046203:109_cdna Constitutive 1 NULL GeneID:515509 12 GENE SUGT1 MGC137150 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) EMBV3_10141 CCAAGGAGCAGAGGGTGGCGAAGAAGATAAAGCAAGTGATGGAGAAAAGGAGCGAGAGAG Gene GeneID:515845|FANCD2:XM_002696934:490_cdna Constitutive 0 NULL GeneID:515845 22 GENE FANCD2 NULL Fanconi anemia, complementation group D2 EMBV3_14384 TTGGTGGTATAAGTAGTGGTGGAAGCACATGCCTTAACCCAGCCCTGAAATCCCGGCTCA Gene GeneID:100300716|LOC100300716:XM_002683998:2_cdna Constitutive 0 NULL GeneID:100300716 Un GENE LOC100300716 NULL hypothetical protein LOC100300716 EMBV3_18246 CTATGTGGCTGTCTGCAAGCCCCTTCACTACTCTACCCTCATGACCCAGAGGATTTGTGT Gene GeneID:100336956|LOC100336956:XM_002693144:49_cdna Constitutive 0 NULL GeneID:100336956 15 GENE LOC100336956 NULL olfactory receptor 710-like EMBV3_43739 AGACTTCTGACTTTAATTCTCTCGGTACTCACTGTTGGCTTTGGCCTAGCAAGAGCAGAG Gene GeneID:281546|TRAM1:NM_001040476:254_cdna Constitutive 0 NULL GeneID:281546 14 GENE TRAM1 MGC129083 TRAM translocation associated membrane protein 1 EMBV3_09765 ATGTGGCGGTCTCACTCTATCACTACTCCAAGATCGCCAGGCAGTTGAAGGATCCTGGCA Gene GeneID:531192|SULT2B1:NM_001081726:295_cdna Constitutive 1 NULL GeneID:531192 18 GENE SULT2B1 NULL sulfotransferase family, cytosolic, 2B, member 1 EMBV3_29923 TGTATGTAGAAGAAGTAGATGTTGGAGAAACAGCCCCAAGAACGGTGGTCAGTGGCCTGG Gene GeneID:505126|AIMP1:NM_001035018:29_cdna Constitutive 0 NULL GeneID:505126 6 GENE AIMP1 MGC128105 SCYE1 p43 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 EMBV3_00499 GTTAACACCAACCGCAGACAGTATCATGAGAGCGAGGAGGAGAGTGAAGAGGAAGAGGCG Gene GeneID:615726|EIF1AD:NM_001076393:113_cdna Constitutive 1 NULL GeneID:615726 29 GENE EIF1AD MGC140637 eukaryotic translation initiation factor 1A domain containing EMBV3_00204 CTGCCACAGTAATCAATGAGAGTCGGTTCACCAAATCAAGTTTTGGAAGAACTCAAAGAC Gene GeneID:617836|GYPA:NM_001098141:62_cdna Constitutive 0 NULL GeneID:617836 17 GENE GYPA gpa glycophorin A EMBV3_19819 CTAGTCTTCCTTTCTACACTGTTATTCCTCTCCAACCCATCTATCACTGGCCCCAGGTTC Gene BVT0101_040483 + 1 EMBV3_38518 GK000016.2:24236389-24256259 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40915 CACTCATAGAACGTGTTGGTGTGAAGAACCTGAAGTCCTGGGCTAGTGTCAATCGAGGAG Gene GeneID:514957|KIAA0020:NM_001098030:5_cdna Constitutive 0 NULL GeneID:514957 8 GENE KIAA0020 NULL KIAA0020 EMBV3_33183 TCGTCGGTTCCGTCCTGGTTTTCTCCTTGATATTCTGGATTCCTTTCAGCATTCTGGTCC Gene GeneID:517541|ADAM17:XM_002691486:380_cdna UTR3_Alt 2 NULL GeneID:517541 11 GENE ADAM17 NULL ADAM metallopeptidase domain 17 EMBV3_34811 AGGCCGCGTATCCACGGAAGTGGACGCCAGGGAGCTGGAGGAGCACCACGGCATCCGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01750 AATTGAGCCGTACTACAGTATCTACAACAGCAGCCCATCCCAGGAGGAGAGCATCCCACA Gene GeneID:539470|GPR75:XM_002691324:469_cdna Constitutive 0 NULL GeneID:539470 11 GENE GPR75 NULL G protein-coupled receptor 75 EMBV3_16027 TCAATTTCTCGCTCCTTGACACCATGAAATTCTGATACCGTTCATATACCGCATAGCTGC Gene BVT0102_138007 + 0 NULL GK000021.2:31825957-31860206 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120992 1 XLOC_073315 Coding TCONS_00120992 XLOC_073315 Coding Coding LOC100848238 21:31740989-31859406 j TSS90249 2388 2 TCONS_00120992_1 114 0.25963149078727 8 0.979901364680449 4.4953850545543e-16 2.05242592269701e-16 1.34164959543372e-08 1.24509286613312e-08 1.1898107263408e-26 5.48712259449956e-05 3.13491320712265e-12 1.09798172588376e-11 1.76503635897428e-37 4.7558802184943e-09 4.8501303961649e-25 1.23838448705348e-13 6.72517581492325e-27 6.52387971301472e-20 7.07397040736499e-12 1.59180564037859e-64 2.03306829085648e-17 1.1099558995694e-12 2.72782281436782e-24 2.39759325223133e-18 5.4419390369909e-16 4.19489433338205e-19 3.61973250323938e-13 2.27040644230675e-08 1.39155850761152e-13 3.98176872205561e-13 1.80678561561176e-30 8.019740204898e-09 6.4297467107328e-09 0 XM_005222003.1 NRG4 PREDICTED: Bos taurus neuregulin 4 (NRG4), transcript variant X6, 0.0 2922 100.00 0.677973199329983 NM_138573.3 NRG4 Homo sapiens neuregulin 4 (NRG4), mRNA. 3e-133 480 87.24 0.163735343383585 TCONS_00120992_1 sp|Q8WWG1|NRG4_HUMAN NRG4_HUMAN Pro-neuregulin-4, membrane-bound isoform; 9e-67 201 86.61 0.973684210526316 0 noncoding TTGCTCATCAATTTCTTGCTCCTTGACACCATGAAATTCTGATACCGTTCATATACCGCATAGCTGCTTATGAACCGTACGTGTATCGTGTTTTACACATAAAAGGAATAAGATCTCACCCTTAGGAGATATATCTGCTTCTAATGTGGCTGTAATTACCATGCTCTTCCATACCAAAATATCTTTTGAGCAGCTACAATTTCTATCAAAGCAGAAGAAATAGAGGTGAACTATAAAGCTAGTTTCCTCTCTACCCTGCAATCTGGAGAAAAACTTTCTCCCAAGGACAAAACAGGTGCTGTTTTTCAACCCTAAACTTTCAGCCAAGAATGAAACTATTTAGAAGTTAAGATGACAACAGATCACGAAGAGCCCTGTGGTCCTAGTCACAGGTCATTCTGCTTGAATGGAGGACTTTGTTATGTGATACCTACTATTCCCAGCCCGTTTTGTAGATGCATTGAAAATTATACAGGCGCTCGTTGTGAAGAGGTTTTTCTCCCAAGCTCCAGTATCCAAACTAAAAGTGACCTGTTCACAGCTTTCGTGGCATTGACTGTTCTTCTGGGAACTCTTATCCTTGGAGCCCTCTACTTCCTCTGCAGGAAGGGCCATCTTCAGAGGGCCAGTTCAGTCCAGTATGATATCAACTTGGTAGAGACAAGCGGTACCAGTGTCCCCCACAGTTTTTCATAAAGCAAGACTCAAATTGTTTCTACAAGTGAAAACCAAGTCAGTCATCTAAAATCTCAATTTCAAATCAAGAGGATTTAGAGTCTTCTGTTTTTATTAAAATGGAATTTATGGTGGTGTTTAAATGGGTTAGGCTGTGTGGGCACAAAATGACACAAGTAGATTTAATTATTTTCTCAAAAATTCCTGTAGAATGCATAGGAAATTATCAGATTTGTAGAAGTTTATTTTACATTCTTTCATGTTCACTGTGTCAAATTTGCAGTATAAATCAGTGGCAAAACCTTTGCTGTTCGGCTTCTCTTACTAGATTGAAAAGTGGTTTTATTTACCAGTGGTCCAGGTTTAAGCAAAGTTGAGAATTACAGCAATGAACTGGCCTTCTGGGCCTCTTCATTAGTCTAGGTCACAGGCTATTAACTACAACAATATGCAGGATGTCTGTTGCCAGGTCTTAATCCCAAGCTTCCCTCCTCTTCCTTACATTGTTACTTGGCTTTTCAAGGAGTTTATTCCTTGAAGCAGACTTTAACAAGGCAAATTGTAGCTGCAGAAAGATTCTGCTTTGAAAGCACATAAGAAAGCATTTTTTAAACATTTTGATTGAATAAACAATCCTGTCAACCCTGTCACTTGACAGAAGGCAGTTCAGTATGCAGACACTAAGAATACATCTTTAGTTTTTTTATACCCGTGTTGATTTTTTCACGTGATCATTTTTCCGGTTTCACAAATGACTATACAACAGTTGCCATTCTAGGAATTTAATGTTTTTAGCTGAAACAGTAATAATGCTTGCTTTTAAGACAAGCCTTTCAAAAACAGCTAAATACTAATATTCAAAAAATATTCGATTGCAATCAAACTTTTCTTTGGACTTTCTTCTCACTCCAGTACTCTCGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCACACAGTCAGAAAAGACGGAGGCAACTTAGCAGCAGCAGCAGGAACTAATATTGAGGATAATCATAATCTAAAGAAACTTTAAAGTATTTTCATCATTCATATAAATAGCAGAAAGAAAATCTTTTGGAGTAAAAACTGGTTTAACAAATTATTGAAAACAGAAAAGTGTGAATGTTCATCTATTTTGATTTCACTTACCTTGCAAGTTTCCGTCTATGCTGCTAGAACCACTGACTGTTACAAAAGGGCCATAGTTATGTCGTACATATTAGAATATGCTAATACACATGTCCTGTAACAAAGACCTGGGAAGAAAACAAGTGGCTTAGGCAAGACTGATTTTAATTTCTGTCTTGTAAAACAGTTTAAAGAGAGGCAGTCCAGATCAGTTATGCACTTCAACAAAAAACTGTATACTCTTCTGTATGGTTCTCTTCCACAAAACAGCATTGACTCTGCTGTGGAGTCTAAGATGGCTCACTACCATATCCACTTCTAAGCAACAGGATTGATTAAAGGAAAACAAAACAAAAACGGTCATACTTTTAAAGGAAATATTATCATTTCCCTCACACTTCACTGTCCTGAATAGTCATACTTGCAAGGGAGACTAGGAAATGTAGGCTTTATTCTGGTGTGCGTGTGCCTGGCTAAAAACCAAAGGTGTTATCTGTGTGAACAGGAAAGAATAGATATCAGGAGAAAATTGGTATTCTCTGCCCCTATTTTGATATATTTTC EMBV3_15316 GTCTCCGGGGAGTCAAAGTCACAAGCGTCTCTTTCCTGCTGGACATAATCTGTAGCCACT Gene GeneID:510923|TRIM25:NM_001100336:14_cdna Constitutive 0 NULL GeneID:510923 19 GENE TRIM25 NULL tripartite motif-containing 25 EMBV3_31560 ACCCTCCTTCGTCATACTAAGGCCACAACAGCATCAACCTCAAAGGACTGTTGCATTGAT Gene BVT0102_176628 + 0 NULL GK000020.2:41816915-42008248 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21749 TGGGACTTGAAAAGACATGCAGAGGATTGTGGCAAGACCTTCCAGTGCACGTGTGGGTGT Gene GeneID:781217|ATMIN:XM_002694734:103_cdna UTR3_Alt 2 NULL GeneID:781217 18 GENE ATMIN NULL ATM interactor EMBV3_37990 CAGTAACCAAGCTTATGGTAGCAGAGCCCCCACTGTGCACGAGATGCCGAAGGTGTTTTA Gene GeneID:618654|C11H9ORF116:NM_001037491:44_cdna Constitutive 0 NULL GeneID:618654 11 GENE C11H9ORF116 MGC133621 chromosome 9 open reading frame 116 ortholog EMBV3_07414 GGGTAGGACTGGGTTTGTCCAGGAAAAGCTATAAGGACCAAACATATAAGGGGAAATTCG Gene GeneID:615304|CPNE3:NM_001099142:82_cdna Constitutive 1 NULL GeneID:615304 14 GENE CPNE3 MGC157075 copine III EMBV3_11397 GCATTTACCCTAAAGTCAGGAAGAAGTCAAGGATGCCCACTCTCACCACTACTATTCAAC Gene BVT0102_094693 + 1 EMBV3_28289 GK000012.2:1-398726 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221406 TCONS_00176150 TCONS_00251068 TCONS_00020842 TCONS_00234011 TCONS_00072336 TCONS_00231833 TCONS_00179125 TCONS_00089141 TCONS_00232226 TCONS_00089492 11 XLOC_134721 XLOC_105929 XLOC_154011 XLOC_011517 XLOC_143490 XLOC_044105 XLOC_141321 XLOC_108898 XLOC_053927 XLOC_141712 XLOC_054276 Coding TCONS_00176150 XLOC_105929 NonCoding NonCoding - 3:22483408-22483930 - TSS130909 522 3 TCONS_00176150_3 55 1.00574712643678 1 0 0 0 0 0 0 0 0 1.41635797310892e-06 5.8696506869402e-05 2.6273899219887e-06 3.65451153040774e-07 0 0 6.00765119810615e-06 1.89784634929376e-06 0.000236119018313696 0.00579766346680866 1.60223015012651e-05 0 1.37766984293209e-05 0 2.13237753811374e-05 0.0030310073532958 0.000169055899068195 0 0 3.8265030092562e-06 1.67279382855558e-06 8.0766063456619e-05 1.24737979833536e-05 XM_001788594.4 LOC538808 PREDICTED: Bos taurus kinesin family member 7-like (LOC538808), 4e-104 381 93.98 0.475095785440613 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 4e-41 172 73.20 0.519157088122605 0 noncoding GAGGGAGAGGGTGGGAAGATTTGGGAGAATGGCATTGAAACATGTAAAATATCATGTATGAAACGAGTTGCCAGTCCAGGTTCAATGCATGATACTGGATGCTTGGGGCTAGTGCACTGGGACGACCCAGAGGGATGGTATGGGGAGGGAGGAGGGTTCAGGATGGGGAACACATGTATACCTGTGGTGGATTCATTTTGATATTTGGCAAAACTATTACAATTTTGTAAAGTTAAAAAAAAAAAAAAACCCTCCAGAAAGCAGGAATAGAAGGAACATATCTCAACATAATAAAAGCCATATATGATAAATCCACAGCAAACATTATCCTCAATGGTGAAAAATTGAAAGCATTTCCCCTAAAGTCAGGAACAAGACAAGGGTGCCCACTCTCACCACTACTATTCAACATAGTTTTGGCCACAGCAATCAGAGCAGAAAAAGAATCCAGATTGGAAAAGAAGAAGTAAAACTCTCACTGTCTGCAGATGACATGATCCTCTACATAGAAAACCCTAAAGA TCONS_00172537 TCONS_00172538 TCONS_00172539 TCONS_00172540 TCONS_00172541 TCONS_00172542 TCONS_00172543 TCONS_00172544 TCONS_00172545 TCONS_00172546 TCONS_00172547 TCONS_00172548 TCONS_00172549 TCONS_00172550 TCONS_00172551 TCONS_00172552 TCONS_00172553 TCONS_00172554 TCONS_00172555 . 3' 2938 TCONS_00172537 TCONS_00172538 TCONS_00172539 TCONS_00172540 TCONS_00172541 TCONS_00172542 TCONS_00172543 TCONS_00172544 TCONS_00172545 TCONS_00172546 TCONS_00172547 TCONS_00172548 TCONS_00172549 TCONS_00172550 TCONS_00172551 TCONS_00172552 TCONS_00172553 TCONS_00172554 TCONS_00172555 . 3' 3459 EMBV3_32439 CAGGAGGGTGACTTGCCAAAACCATGCCCCCAGTCTCTGCTTCCTGAGTGAAATCAAGTT Gene GeneID:100297737|LOC100297737:XM_002690743:469_cdna Constitutive 0 NULL GeneID:100297737 10 GENE LOC100297737 NULL hypothetical protein LOC100297737 EMBV3_02090 TTTTCCCTGACCCTTCCCCCACCCGCCTGTGTGATTCCAGCCAGAGCTGACGTTTCTAAT Gene GeneID:507694|TMEM189:NM_001100315:928_cdna Constitutive 2 NULL GeneID:507694 13 GENE TMEM189 NULL transmembrane protein 189 EMBV3_27466 TGACTGTGCTACCCCTTTTCACATCAAAGAATGGAGAACTACTGACAACGTAGGCCGCGC Gene GeneID:781334|TMSB4X:NM_001113231:119_cdna Constitutive 0 NULL GeneID:781334 1 GENE TMSB4X TMSB4 thymosin beta 4, X-linked EMBV3_18922 GCGGAGTGCGGCAAGTGGCACATGTTTCAGAAATGAAGCAGATGAACCTCACCACGGGGA Variant GeneID:539763|PARP11:NM_001082452:40_cdna 529^718 3 EMBV3_26213 GeneID:539763 5 GENE PARP11 MGC152112 poly (ADP-ribose) polymerase family, member 11 EMBV3_36913 TACTGATACAGATGGGCCTTGTGGTTAGTAGAAAACCTCTCACGTGGAAAGAGCATGTCT Gene BVT0102_208758 + 0 NULL GK000011.2:11885426-12371179 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024088 1 XLOC_014434 Coding TCONS_00024088 XLOC_014434 Coding Coding EXOC6B 11:11617975-12340420 j TSS17760 5852 1 TCONS_00024088_5 811 22 0.991930170366146 0.000307547051274002 0.000435897171199858 0.000662579299776231 0.00123378497110121 0.000660715985478951 0.000249133595165538 0.000265297877180572 0.000153955038689391 0.000776466167291276 7.87563941780039e-05 1.77139196772872e-06 3.77116952836441e-30 0.000101492967532798 2.04405197148351e-05 6.90067617744053e-05 0.00369034158719383 0.000720101456216766 0.000577493269791138 0.000517098600922121 0.000392519320764924 0.000407995914318951 0.00101241778420708 0.001223318593113 0.000892401666087028 0.00117306934680387 0.000450985355512061 0.000489440342871321 3.94986994093549e-05 9.96108306581163e-06 4.67473195050298e-05 XM_005212511.1 EXOC6B PREDICTED: Bos taurus exocyst complex component 6B (EXOC6B), 0.0 1.054e+04 100.00 0.99812030075188 XM_005264223.1 EXOC6B PREDICTED: Homo sapiens exocyst complex component 6B (EXOC6B), 0.0 5595 81.52 0.982399179767601 TCONS_00024088_5 sp|Q9Y2D4|EXC6B_HUMAN EXC6B_HUMAN Exocyst complex component 6B; 0.0 1671 98.77 0.998766954377312 1 coding 0 0 0 0 -0.0587892871840531 0.700887389216655 0.055129678698331 0.265119412289141 GGGGCGTGCCCAGTCTGAGGGAGGGGTAGTCCTGCGGGTGGCCGGAGGCTTAGGATCCCCGGGAGCCTGGAGTGAGAGAGAGAGAGATTGAGAGCGAAAGGTGAGCGGAGCTGAGGGAGGGGACGCGCTGCGGGGCTCCCCGAGTCTATGGAGCGGGTTAAGATGGCGGAGGCGGAGAGCCTGGAGACAGCGGCGGAGCACGAACGGATTCTTCGAGAGATCGAGAGCACCGACACGGCCTGCATCGGGCCCACGCTCAGGTCTGTCTATGATGGTGAAGAACATGGACGATTCATGGAGAAGCTTGAAACTCGTATACGCAATCATGACCGAGAAATTGAGAAAATGTGCAACTTTCATTATCAGGGCTTTGTGGACTCTATAACAGAACTGCTGAAAGTAAGAGGAGAAGCCCAGAAACTCAAAAATCAAGTGACGGATACTAATAGAAAACTACAACATGAGGGAAAGGAACTGGTGATAGCAATGGAAGAGCTGAAGCAGTGTCGACTACAACAGAGAAATATTTCTGCCACTGTTGATAAATTAATGCTGTGTCTTCCAGTTCTGGAGATGTATAGTAAACTGCGGGAGCAGATGAAAACTAAAAGGCATTATCCTGCACTGAAAACTCTGGAACATCTAGAGCATACCTATCTTCCTCAAGTAAGCCATTATCGATTCTGCAAGGTGATGGTGGACAATATCCCCAAGCTTCGAGAAGAAATTAAGGATGTGTCTATGTCCGATCTGAAAGACTTTCTGGAGAGTATCCGCAAACATTCAGACAAAATTGGAGAGACTGCCATGAAGCAAGCACAACAACAAAGAAACCTGGATAACATCATCTTGCAACAACCCAGGATAGGTAGCAAGAGAAAATCTAAGAAAGAAGCTTATACAATTTTTGATACAGAAATAGAAAGCACTAGCCCCAAGTCTGAACAGGATTCAGGAATTCTGGATGTTGAAGATGAGGAAGACGATGAAGAGGTACCTGGTGCCCAAGATTTGGTTGATTTCTCTCCTGTTTATCGATGTCTACACATATATTCTGTCTTGGGGGCCCGGGAAACATTTGAGAACTACTACCGAAAACAAAGGCGAAAACAGGCTCGTTTGGTGCTCCAGCCTCCGTCTAACATGCATGAAACTTTAGATGGCTACAGGAAGTATTTTAATCAAATTGTCGGCTTTTTTGTGGTTGAAGATCACATTTTACATACAACACAGGGCTTAGTAAATAGAGCCTACATTGATGAACTGTGGGAAATGGCACTTTCAAAAACCATCGCAGCACTCCGTACTCACTCGTCTTACTGCTCTGATCCAAACCTCGTGTTAGATTTGAAGAACCTCATTGTGCTTTTTGCTGACACACTTCAGGTGTATGGTTTTCCTGTAAATCAGCTTTTTGACATGCTATTAGAAATCAGAGACCAATATAGTGAAACTTTGCTAAAGAAGTGGTCAGGTATTTTCAGAAACATACTTGATTCTGACAACTACAGTCCTATCCCAGTAACAAGTGAAGAGATGTATAAAAAGGTGATAGGACAATTCCCATTCCAAGATGCAGAGCTGGAAAAGCAACCATTCCCAAAAAAGTTTCCATTTTCTGAATTTGTGCCAAAAGTTTACAACCAAATTAAAGAATTTATCTACGCCTGTCTGAAGTTTTCAGAAGATCTTCATCTAAGCTCAACTGAAGTTGATGACATGATTCGTAAATCAACAAACCTGTTGCTAACTAGGACTCTAAGCAACTCTCTGCAGAATGTCATTAAAAGGAAGAATATTGGACTTACTGAGCTTGTCCAGATTATTATCAATACAACACACTTGGAGAAATCCTGTAAGTACTTGGAAGAATTTATCACCAATATCACTAATGTCCTTCCAGAGACAGTCCACACTACCAAGCTGTATGGCACCACGACTTTTAAGGATGCCAGACATGCAGCTGAAGAAGAGATTTATACCAACTTAAACCAGAAGATTGACCAGTTTCTACAGCTGGCTGACTATGACTGGATGACAGGAGATTTGGGCAGCAAAGCTAGTGACTATCTAGTGGACCTCATTGCCTTTCTACGTAGCACCTTTGCTGTATTCACGCACCTTCCTGGAAAGGTGGCCCAGACAGCATGTATGTCAGCTTGCAAGCATTTAGCCACATCTTTGATGCAACTTTTGCTGGAAGCTGAAGTAAGGCAGCTCACCTTGGGAGCATTACAGCAGTTCAACCTGGATGTCAGAGAATGTGAACAGTTTGCCAGATCCGGCCCGGTGCCTGGGTTCCAGGAGGACACGCTGCAGTTGGCCTTCATCGACTTGAGACAACTTTTGGATCTCTTCATCCAGTGGGATTGGTCAACCTACCTTGCTGACTACGGTCAGCCCACCTGCAAGTACCTCCGGGTAAACCCTGTGACAGCTCTGACCCTGCTTGAGAAGATGAAGGACACCAGCCGCAAGAACAACATGTTTGCACAGTTTCGGAAAAATGAGCGAGACAAGCAGAAATTGATTGACACCGTGGCCAAGCAACTCCGGGGACTCATCAGCAGCCACCACTCGTGAAGACGGGCCTCAGGCCCACAGAGGCTGATGGCTGCAGCCCCAGAGTCCAGGACCCAGCGCTGGCTGGCCCTGCATTTGTGCATTCTTCTTCAAAGAGAACAAATGTATTTTTTTATAATAACCTATGTACAGTATTCGCATAACCTTTCCCTATAGTAGAAGAGGCACAAGAGTAAGCAAGTCCAGGAGATGTTGCTAGGCCGGGCTTCAGGGGAAGCCACACTACACTGTATCTTCCTAGAGATGGTGGCGTCCTCAGTCCGGTGTGAGGAACCCCCTTTCACCCGTGGCTCTAGAGCTTAGGTCTGGGGCTCAGAAACTGCACAGACAAAATGGGCACTTGGCACTGGGAGATAAGGTGATAGGCAGAAGGATAATAAAGTACATCCTGTTCACTCCTAGGTGCCCCATTCACTGCGTAGGTGAGGCTGGTTGTTCTTGATGCAAGGAAAGGGCCTGGAAGACACTACTCCTTGGTCTATGAAAGACCAACACACAGCTGTGGAGTTCCAGAGGTTTTTTTTCTCAGTCCAGAGACTTTCCCTAAGCAGACAGCAAGCACGCCACTGTGACCAGCTGACAGCTTCGCTGCAGCTCCCCCAGGATGGCATCTTGAAGCCTCAATCTGCCCCCAGCGCTTGCACTCCTGATTTGTCTGGGGCATGGCAGAGCTGAGTACGCAGTGGGACTAACTAGACTATGACTAGCTGTAGGTTGCCCCCACACCAGGAGGAGTCTTGAAAGCCAGTGTGAATGGGGTCAGAGCCCAGCCCCTTCCCCATTCCTCTCACTGCCCTCCTTCCTGGTCAGGCGCTTGGTTCAGGGCCCAGGTCCGCAGTTATTCCACAGACAGAGAAGCTCAGACGTGGCCTCCGCCAGCAGTGTCACTGGGATAGTCAGCTTGCAGAAGCCTGAAAAATGACCTCTTGCTTTCCGCTTAGGTAAAACCTGAAGGTTACTTGCAATCGACCCTTTGTGTTTTAAAACCAACTTTCTGGCCACCATCTCTATGGGAAATGCCACCAGCTCTGTGCTGTGGGGAGAGCTTCCGCTGGACCTGCCTCTGGGATGGAGCCGCTGTCACCATGAAGTAGAGCAGAGCAACCCTGACTAATGGTTTGTCACCCCAGCCGTCCCTCACCAAGTCATACCCTGGATAAGAAGCTCCTGCTCAAGCCTAAAGCTTCCGTCCCCCTTTGAGGTCCCCAGAGCTATCTTTTGGCTTTGTCTGAGAAAGATTGCCTGTAATCCTATCCTTCAAGCTCTGGAGTTTGCAGAGGAGCCTGAACTGGCTATGTCCTCTGTCACAAATGGGCTCCTGTGACTTAATGCAAAGGCTTTGCTATGAGGTCAGTCATTGGAACCTGCCCTTTAAGACACTTCAGGAAGACGCTATTAAGGCTACTGGTGAGAGTATAATTGTGCATCACCAAACAATGACAAATAAGCCACACAGGCCTTTCCAGCTAGGATTAGTGGGAGGAAAGACTCATCAAACAGAATTCACTACCTTTGTCAGCTGTTGAGTTGCTTCTAGGGAGGGCAGTGCTTTTCACCACCACCCCCGCCCCCCTGCCAAATATTATGTCACAACTTGAAAACCGTGGGGAAGAAAATATGCACACAGACACACAGACTTCCTCAAAACTGGAAAGACCAGGCTGCTGGAGGCTCTGCAGAGCTTTCTGAGGCTCATCCTCAGGGCTAGTCATCCTGAGGGCTTGGTCCAGGGTCTTAGAATGAGGCTCAGAGATGAGCGCTGCCTCTCAGAACTGCTACAGCCAAGGGAGGGCAGGGGCCAAGGGGATGAGACCTCAAATGCCATCTCTCAGATTCTGGACTTTATTAGAAAAGAGCAAGAAATGATCACTCAAATCCTATTGCTTAAGAAGGGCCCCAAACACCCTGCTTCACTAGACCCGTTACAGCAGGATCTCTTCTGCTTTTTGCATTCCACTCTAACTTTGAAGTGGAATGGAGAGAAGCTTAAGTATGTCGCTTTATTTTTCAAGCATTATCATTGTCGGTCTGGTCTCAGACCCGTACCCTGGAGAAATAGTGTTACAAAGAGAAAATGAACAGGGTAGAGGAACGAGGGTCACCCTGCCCCTTGCACACAGAAGCCCCTCTGTAGAAAACACGTACTCAAGCCCGAGACTCACAGGGCAGATCCTTTGTAAGAGCCCTTCTTTCCTCTTGGTCTGCCTCCAGCCTTCCCTAACAAAACCAACCTGCACCACTGAGTTGTCTGTGGAGACACACTCTTGGTGACCAGGGAAAGGTAGAAAACAGGGACTGGCAATGTCCAGACTGTCTGAATTGGTGAAGTCGGAGTTTTAGTTTTGTCCGTAGGCCTCAAGCTAGGTCAGCCCTTGAGAGGACTTGGACGAAGCATGGGTGCCTGTGTCCCCCAGAATCCTGACATCTGGCCTCAGATGCCCAGAGATGTAGATGCGCCCCAGAGGCCTGAGGAAGAGGCGAGAAAAAGGGTGCCTGGAGGCCTTCCCGTCTTCTAGTTGGCTGAGTTCTTGGGAAAACCAGACCCATATTCCTGAAGGGACAGTCAGGTTTGGGACCCTGGTGGGTTGCAAGTAGTATTTTAGGCAGCTGGAATAGTTTGAATGTATCACATGGCAAAATCTCTGAGGAGAATAAATGAAGCTGCTGATGGTGGGGAAGAACAGGACGTGAAAATTGGAAGCAGCAGAGAGTTCCCATTGGTAAAGGGCATATACAGCCTCCAGGGAGCAATGCCCAGCATTTGCGTTGTCTCCCAGGCCTCCGAGTCAGCCTAGCTTCACTGCGCACTTGACAAGTGTTTGCTCAGCAAGTCCCAGACCCAGGCCCTTTATCCCCAAGGTTGACATTGGCCGTGACTCTGCCCATGAGGCCTCTGAGCACACTCCCCACGGCCTGCTGCAGAAGCCCCTCACCAGAGCCTCGCTTCTCCCAGGACGCTGCTCCTGGCTGCTTCTGGTGCCTCTTTTATCTTTTTCCTTTGCCTGAGTTTGCAATTACTTTTCACTAATGTGTTGGAAATGGCCTTTTTATTTTGCACAAATAGTTGCACATTTATGAGGGAAATTTAGGAAAGTCCATTTTTAACTCTAAAGGGAACTTTTTTCTTTAAAACTCAACCAGTAAAGCTACTGATACAGATGGGCCTTGTGGTTAGTAGAAAACCTCTCACGTGGAAAGAGCATGTCTACTCCTCCTGTATGTTCTCTTTTAATTGCTATTAAATAAGGGAGCCTACGCACCTGCTCACC EMBV3_31041 TTCCCCATGGAAACCATCCTGTTAGGGGTAAAGGGTGGGGAGCCATGTTTAAGTGACCGA Gene BVV0102_036927 + 0 NULL GK000005.2:28104759-28129500 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17058 TTATATGTACTGTTTTGTATGGCATCAGGTAGAAACTTTTATCTGCTCAAAGAAAATAAA Gene GeneID:767866|NOTCH1:XM_002691620:285_cdna Constitutive 2 NULL GeneID:767866 11 GENE NOTCH1 NULL Notch homolog 1, translocation-associated (Drosophila) EMBV3_04213 GAGTCAGACACGACTAAGCGACTGAATAACAGCAACAAGTGAAAATGTAAGTCCCTCCCG Gene BVV0102_017622 + 0 NULL GK000007.2:83579635-83599488 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214386 TCONS_00214387 TCONS_00214385 TCONS_00214388 TCONS_00214382 1 XLOC_130675 Coding TCONS_00214382 XLOC_130675 Coding Coding ZCCHC9 7:83597937-83607998 j TSS160367 3035 2 TCONS_00214382_7 149 0.372322899505766 7 0.699005964214712 0.00117806619362367 0.00234860659122826 0.000437704264634431 0.000668394520720983 0.000114622194325647 0.000231877682082609 0.000561230838162279 4.27980379480789e-49 0.000471186202824596 0.000147679159233157 3.38562096084561e-21 6.90654849358141e-45 4.51155515422248e-06 3.24801455375388e-05 8.07573320747656e-05 0.000455761756837108 0.000162857722201277 8.17407016544765e-24 0.00116079357161806 0.00067557250115193 0.00158772047985503 4.85001902207148e-06 6.53895907102001e-26 7.33105757207812e-05 0.000719835098779176 0.00123715089827297 0.00100391232539633 3.12745872283331e-05 5.16715432395383e-06 2.46208048714281e-05 NM_001101055.2 ZCCHC9 Bos taurus zinc finger, CCHC domain containing 9 (ZCCHC9), mRNA. 0.0 1626 99.89 0.297528830313015 NM_032280.2 ZCCHC9 Homo sapiens zinc finger, CCHC domain containing 9 (ZCCHC9), 0.0 782 79.18 0.296869851729819 TCONS_00214382_9 sp|Q8N567|ZCHC9_HUMAN ZCHC9_HUMAN Zinc finger CCHC domain-containing protein 9; 6e-84 250 96.67 0.991666666666667 2 noncoding 0 0 0 0 -0.0739497224904375 0.824856800653099 0.0229610696379542 0.633081206936557 CTTTTCATATTTTCATTACAGTGATCCATTCCCACCGTGCTAATAGTTTTACTTTACTGCTGCTTAGGAAAATGTAATGTCCTGCGACTGCATGTCCTGATTTCAGGCACAAGTCTCAGATTGGACCACTTTCGATCACAGGTGCCTGGTCCTGGCCCAATCAGCTGTGAGGAGTTAGTCACACGATATAAACATGGCTGCCAAGGGCCCACTCCTGGAGGTTGGGAATACTCAAGGTGTGGGAGAGGCCAGACATGCCAAAGGTCACGTACTTCTCTATCACCCTGCTTATTTAATTTATATTCAGAGTACCTCATCCAAGATACCCGGCTAGATGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATTAATAACCTCAGATATGGAGATGATACCACTCTTATGGCAGAAAGCAGAGAGTAATTAAAGAGCCTCTTGATGGTGAAGCAGGAGAGTGAAAAAGCTGGTTTAAAATACAACTTTCAAAAAACAAAGATCACAGCATCTGGTCCCATCACTTCATGGCAAATTGATGGAGAAACAATGGAAACAGTGATAGATTTTATTTTCTTGGGCTCCAAAATGACTGCAGATGGTGACTGAAGCCATGAAATGACAAGACATTTGCTCCTTGGAAGAAAAGTTATGACAAACCTAGACAGCATATTAACAGGCAGAGACAATACTTTGCCTACAAAGATCTGTATAATCAAAGCTATGATTTTTCCAGTAGTCATGTACTGTGAGAACTGGACAATAAAAAAGGCTGAGCACTGAAGAACTGATGCTTTTGAACTGTGGTGTTGGAGAAGCCTCTTGAGAGTCCCTTGGACTGCAAGGAGCTCTAACCACTGAATCCTAAATCTTAGTTAAAGGGAATCAACCCTGAATATTCACTGGAAGGACTAGTGCTAAAGCTGAAGCTTCAATACTTTGGCCACCTGATGCCAGGAGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAAGGGACGACAGAGGATGAGATGGTTGGATGGCATCACCTACTCAATGGTCATGAGTTTGAGCAAACTCCCGGAGATAGCGAAGGACAGGGACGCCTGGCCTGCTGTAGTACACAGGGTAGCAGAGTCAGACACGACTAAGCGACTGAATAACAGCAACAAATGAAAATGTAAGTCCCTCCCGCTACCAATTCCAAGAAATGTTTGCCTAATTTTACGATGAGGTCCAGTACAAAGACCATTTCTTAGGGAAGCCTTTTGGGCCTTTCCCATCGCCAAGGATCCTCTCATTCGTCTCCCCCCATTATGCCTTGCGTTCTGCACAGCACAGATCGTACACTCTTCATCTTCGCGTCCCCCGCGCCCAGCGCGTGCCCTTCAAACACTGCGCCCTCCACATTTACTAATTAGCCACCTTTCCCAGAGCTGAGGTGCACCGCAGCGCCGGACAGGGACACGACTGCTAGTAAGCCAATTGCTCGCCGGAAGTGACGCACTGCAGGGACGACGTGCTTCCGGTCCCTGGTGTCGCCGTCTCCGCCGCAGGGGGACGGGTTTTTTCTGGCCTGCTAACTCCGCTGCTCTGGAGGATCCTTTCCTGATTGATACACCTCTAATGAAGCTATGACCAGGTGGGCACGAGTCACTACCACACAGAACAAACGACCCTTTCCTGCAACATCATGGGAGGACTTGAAGAAGGGGTCCTCTGAGGGACAAAGCCAAAATCTTCCAAAGAGTAAACAACTTGAAGCCAATAGGCTGTCCCTTAAAAATGATGCCCCCCAAGCAAAACACAGAAAGAATAAAAAGAAAAAGGAGTATTTAAATGAAGATGTGAATGGATTCATGGAATATTTAAGACAAAACTCACAGATGCTTCACAATGGTGAGGTGATAGCAACAGACAGTCAGAAAGTAAGGGAAGAAATTGAAGTTGCTTTAAAGAAAGACAGTCGCCGGGAAGGAAGACGATTAAAAAGACAAGCAGCAAAGAAAAATGCAATGGGGGCCCCAGGTTCAAGGTTTGATCCGTGGTCAGGGAATTGCATCCCACGTGCCCCACCCAACTAAAGATTCTGCAGGCTGCAAGGAAGATCGAAGATCTCAACAGCTGCAGTATGTTTCCATTGTAGACAGCCTGGCCATGGGATTGCAGATTGCCCTGCTGCCCTTGAGAATCAAGAAATGGGCACTGGAATATGTTACAGGTGTGGATCCACAGAGCACGAAATAACCAAGTGCAAGGCTAAAGTAGACCCAGCTCTTGGTGAATTTCCTTTTGCAAAATGTTTTGTTTGTGGGGAAATGGGGCATCTGTCCAGATCTTGTCCTGATAATCCCAAAGGACTCTATGCTGATGGTGGTGGCTGCAGACTGTGTGGCTCTGTGGAACATATGAAGAAAGATTGTCCCGAAAGTCAGAACTCAGATCGAGTGGTCACAGTTGGTCGCTGGGCAAAGGGAATGAGTGCAGACTATGAAGAAATTTTGGATGTGCCTAAACCACAGAAACCCAAAACAAAGATACCTAAAGTTGTTAATTTTTGATGATTAGTACTGTTGTTTGTTCAACATTCTGAACTGGGCCTGCTTTACAAGTTGGAGCTAGACTGTCCCTTGGAGGCCTGTATTATAGATATCAGTATAATTTAGGTGTGATCAAACCAGTGTCCATCAAGGGGCACTTCTCCCATTGTCTCCCATTGTTTGGAGAAGATCACTGAAAAAAGTGTAAGATGTTTAAAATGGATTTTCTAAAAGAATATATTTTTGACCTATAGAACTTAGGTGTAACTAAGTGATTATATACCTGATTGTAACAATCATTTTTTTCTTAAAAACAAAATTATGCATTAATATGAACTATCCCTAAACATAGGGTAACTGCTTTGCATTTGGAAGTGAATTTGTGGTCCTGTTGTTGGTTCAAAGTATCAATTTATCATTATGTTAGAAATTTATTTATAATTGCCACAAAATGTATTTTTAAAATAGTAAATAAAAATTCATTTGCTATTTA EMBV3_10067 AGGGTGTGGAGCAGCACCTCCTCTTTGTGTGGAGCCAGGATTCTCTAAGCAGTCTCACTG Gene BVT0102_010317 + 0 NULL GK000019.2:24181332-24316923 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099240 1 XLOC_059483 NonCoding TCONS_00099240 XLOC_059483 NonCoding NonCoding - 19:24197493-24197886 - TSS73616 393 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.72051515954608e-05 0.0014785740037384 0 0 0 0 0 0 4.26580125718134e-05 0 0 0 0.000146643945624489 0 0 NM_001013784.1 E130309D14Rik Mus musculus RIKEN cDNA E130309D14 gene (E130309D14Rik), mRNA. 6e-56 221 92.76 0.381679389312977 0 noncoding 0 0 0 0 0.0354452263344016 0.740745270045174 0.0274726375934145 0.571698230781089 GTTTTTCAGGTATTTTATTAAGAATAAGGCATATGATAGTCACCCCTAAAGCACAGGGCTCTATTTCTGTAGGTGAGTGAATACACTCTGAAAAGCATTGGATTAAAAAGCGCAGCCAACAGAGAACTTGGAGCAGGATCCCTCTGCCGTGCCTGCAGGGCTCCTGCCGGGTGTTTCTGAAGCCTTGCAGGTCCCCTACTCAAGGCCGGCCGCTCAGTGAGACTGCTTAGAGAATCCTGGCTCCACACAAAGAGGAGGTGCTGCTCCACACCCTCTTGGCCTCCTTCTGCTCCATCAGGGGGACCTCTAGTCTGCTGCTTGTTTTGGGGAAGGGCCACCCCATTTCAGCCCGACTGGTGCCCCAAACTGCAGGCCATTGTGAGCGGGGACAGT TCONS_00095861 . 5' 8607 TCONS_00095861 . 5' 8607 EMBV3_16839 CAGGAAGTGTTTCCCGGGTCAGGCTGCTTTATCAGGCTCCAGGGATTTCTTTTCATCATG Gene BVT0101_000509 - 0 NULL GK000019.2:46494783-46593335 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097359 1 XLOC_058232 NonCoding TCONS_00097359 XLOC_058232 NonCoding NonCoding - 19:46500347-46504797 - TSS72159 415 2 0.907170150595639 0 0 4.45976757657441e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00200439555109139 1.73287497446881e-05 0.000117040481854085 0 0 0 0.000166951176035574 5.09311378755074e-05 0.000522381619806091 0 0 0 0 noncoding 0 0 0 0 -0.00454143481150082 0.97256127767124 -0.00986312175885426 0.88133711246507 GAGGACCACAGGGAGGGATGACCTACCTCTGACCAGCACAAGTGAACATCAGCCTGTTTCATTCATATACAACAGCCTGTGTGGGAGTATCTCTCTACCAGCCCCACAGGTGACAGGTGGAGAGCAAGGCACTGGCTCTTCACCATGGAAAGAAGCGCAATAAATTCATGATGAAAAGAAATCCCTGGAGCCTGATAAAGCAGCCTGACCCGGGAAACACTTCCTGGCTATTGTAACTGAGACTCCCAACTCCTGTCTCTCTTTCACTGACTGCCCTGTGCCCAGCTCTCCCAGCAGAAAGGAACACACAGAAGGACTAGCAGTGTGGCTGTGGGGCTGTGTCTTTGTCTCGTCTGCTCTGAGACATTTAATTCTCAAGCACAGTGCTTGGTACTCAGTGATAGCCCCTGCTCAC TCONS_00094111 r 3' 5566 TCONS_00094111 r 3' 5825 EMBV3_24755 AGAGTATACATTAAGAGTATAACCTGGGTCAGCCTGGTTCGTTTACAATACAGTGCTTTG Gene BVV0102_409915 + 1 EMBV3_41422 GK000008.2:17311600-17323315 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224552 TCONS_00224546 TCONS_00224548 TCONS_00224549 TCONS_00224550 1 XLOC_137551 Coding TCONS_00224546 XLOC_137551 Coding Coding PLAA 8:17271466-17313570 j TSS168348 4665 2 TCONS_00224546_5 355 14 0.889532812388666 0.00147137206559931 0.000847241727519633 0.000415928231513673 0.00075338796884913 0.00059885886564071 0.000277956571741634 8.79274032504931e-28 0.000413910408517818 0.00052655764832233 1.71776618324062e-19 1.29150916000882e-54 2.19233870792834e-05 2.24406392211588e-06 0.000151622609197173 0.000130034215717401 0.000407368802383767 1.38791351134088e-11 0.000145933813511797 0.000529625101316567 0.000540254875718791 0.0003632345086018 4.40642641951202e-05 8.64973772245153e-05 0.000115477281331141 0.00100918190196979 0.00059995893379792 0.000868206924737606 3.79808592519786e-05 4.41580834494697e-11 1.7234152721011e-11 NM_001105335.1 PLAA Bos taurus phospholipase A2-activating protein (PLAA), mRNA. 0.0 4744 99.66 0.566773847802787 NM_001031689.2 PLAA Homo sapiens phospholipase A2-activating protein (PLAA), mRNA. 0.0 4242 82.26 0.902465166130761 TCONS_00224546_5 sp|Q9Y263|PLAP_HUMAN PLAP_HUMAN Phospholipase A-2-activating protein; 0.0 683 93.24 0.997183098591549 1 noncoding 0 0 0 0 0.411707737694983 0.157140356445517 0.0414554060110041 0.516510019878448 CCTTCCCTGCCGCCCTTCCGCCGGCCCTTGGGTTCTTCCGGGCCCGGCGTCCCTCACTTGCAGGCGCTCTCCAGCCGCCCGCCGGGCCTCGCCGACTGACCGAGCTCGCGCGGTGCCCCGGCCCCGGGCGCCGGACCCACCAGGGCTATGGCGAGCGGCTCCTGCAGATACCGGCTGAGCTGCTCGCTCTCGGGCCACGAGCTGGACGTGAGGGGCCTGGTATGCTGCCTCTATCCACCGGGGGCTTTTGTGTCCGTGTCCCGAGATCGCACCACCCGCCTCTGGGTCCCAAACAGTCCTAACAGGGGCTTTACAGAAATGCACTGTATGAGTGGCCACTCCAATTTTGTCTCTTGTGTATGCATCATACCTTCAAGTGACGTGTACCCTCATGGACTAATCGCCACTGGAGGAAATGACCACAATATTTGCGTTTTTTCACTTGAGAGTCCAGCACCACTTTATGTACTAAAAGGTCACAAAAACACTGTTTGTAGTCTTTCATCTGGCAAGTTTGGGACATTACTTAGTGGCTCATGGGACACAACTGCTAAAGTCTGGCTGAATGACAAATGCATGATGACCTTACAGGGTCATACAGCTGCAGTTTGGGCAGTAAAGATACTACCTGAACAGGGCTTAATGCTAACTGGATCAGCAGACAAGACTATTAAACTGTGGAAAGCTGGAAGATGCGAGAGGACTTTTTCTGGGCATGAAGACTGTGTAAGAGGCTTGGCAATTTTGAGTGAAACAGAATTTCTCTCCTGTGCAAATGATGCTAGTATTAGAAGGTGGCAAATCACTGGCGAGTGTCTTGAAGTATTTTATGGTCATACAAATTATATTTATAGCATATCTGTCTTTCCAAATTGTAAAGATTTTGTGACAACAGCAGAAGACAGATCTCTGAGAATCTGGAAACATGGGGAATGTGCTCAAACAATCCGACTTCCAGCTCAGTCTATATGGTGCTGCTGTGTGCTGGACAATGGTGACATTGTGGTTGTGATGGTATTATTAGAGTGTTTACAGAATCAGAGGATCGGACAGCAAGTGCTGAGGAAATCAAGGCTTTTGAAAGAGAACTCTCTCAAGCAACCATTGATTCCAAAACTGGTGACTTAGGGGACATTAATGCTGAACAACTTCCTGGGAGGGAACATCTGAATGAACCTGGTACTAGAGAAGGACAGACTCGTCTAATCAGAGATGGAGAGAAAGTTGAAGCCTACCAGTGGAGTATTAATGAAAGGAGGTGGATAAAAATTGGTGATGTTGTTGGCTCCTCTGGTGCTAGTCAGCAAACATCTGGAAAAGTTTTATATGAAGGGAAAGAATTTGATTATGTTTTCTCAATTGATGTCAATGAAGGTGGACCATCATATAAATTACCATATAATATCACTGATGATCCCTGGTTAGCTGCATACAACTTCTTACAGAAGAATGATTTGAATCCTATGTTTTTGGATCAGGTGGCTAAATTTATCATTGATAACACAAAAGGTCAAATGTTGGGACTCGGAAACACCAGTTTTTCAGATCCTTTTACAGGTGGCGGTCGGTATGTTCCAGGCTCTTCATCAGGATCTTCTAACACCCTTCCTGCAGCGGATCCTTTTACAGGTGGTGGTCGGTATGTACCGGGCTCTGCAAGTATGGGAACTACCATGGCTGGAGTTGATCCATTTACAGGAAACAGTGCCTACCAATCAGCTGCATCTAAGACAGTGAATATTTATTTTCCTAAAAAAGAGGCTGTCACTTTTGACCAAGCAAACCCTACACAAATATTAGGTAAACTAAAGGAACTTAATGGAACTGCATCTGAAGAGAAGAAGTTAACTGAAGATGACTTGGTACTTCTTGAAAAGATACTGTCTCTAATATGTAATAATTCTTCAGAAAAACCCACAGCCCAGCAACTTCAGATTTTATGGAAAGCTGTTAACTGGCCTGAAGATATTGTCTTTCCTGCCCTTGACATTCTTCGGCTGTCAATTAAACATCCCAGTGTGAATGAGAACTTCTGCAACGAAAAAGAAGGGACTCGGTTCAGCAGCCATCTCGTCAGTCTTCTGAACCCCAGAGGAAAGCCAGCAAACCAGCTGCTTGCTCTGAGGACTTTTTGCAATTGTTTTGTTGGCCAGGCAGGACAAAAGCTCATGATGTCCCAGAGGGAATCACTGTTGTCCCACGCAATAGAACTGAAATCAGGGAGCAATAAGAACATTCACATTGCTCTGGCTACGTTGACCCTGAACTATTCTGTGTGTTTTCATAAAGACCATAACATTGAAGGGAAAGCTCAGTGCTTGTCAGTAATTAGCACAGTCTTAGAAGTTGTACAAGACCTCGAAGCCACTTTTAGACTTCTTGTGGCTCTTGGGACACTTGTCAGTGATGATTCCAATGCTGTACAATTAGCCAAGTCTTTAGGTGTTGATTCTCAAATAAAAAAGTATGCCTCAGTATCAGAGCCAGCTAAAGTAAGTGAATGCTGTAGACTTATCCTAAATTTACTGTAACAGTGGGTTAGGGGACTGAGATTTTAAATTGATGAGTGTTTTTTTCTTTCACATTTCACATGACTGATAACAGATGATGAAACAAATGCTGTGGATTAAGTAAAATTTCAGATCCTGTAAAGTGGGGTAGTGGGGAGAGGGGAAATAAAATTTTTGCACTGATGAACTGTGAAATTTTCCTGTGTAATGCGGGCAGGTTTTTAAGAGCTTTAGAGATAAATTAAGAATGAGCTATGACCACCAACAACACAACTACAGTGGCAGAATTCCTTTACATTAGCCACCTAGAAGAAAAGGGCTTTTATTTATGTAATCTGCTTTTGCTATTATACTTGTATACACCAGATTGTTATTTCTTGGTGGTTGTCTTTTATTTAATTTCCACTCTACTCATTTTCATTGCTTGATTCAATAGCACTGAATGATTTCAAAGTCTTGTTTTAGGACAAATGCTTTAGAATTAAAATTAAGTTTGTTACAAATTATTCCATATATTGAGATGTAAAATAATTTCTTCATTTAAGTCCTTTGTAAATAGAAAGTTTGTTTAATGGCTTATTTTTAGATGATTGAGAGCAAGTTACTAATTTGTTAGGTATTTGAAAGCAAATTTGTTAGGTATCAATTCAGTCATATGAAGCCCCAAATTGACTACAAGTTCATGATCCAGTTTCTTTTCCCCTTCACTATTTGGGATAACTTCATTATTCCAGTTTCAAAAATAATCTGATTGTTTATTTTTGGTTATTTCTATATATCAGAGGGAGTTTGGAATGTGTTGAATATTATCAGACAGTTGTGCAAGCAAGAGTACATCAAACTGTTATTTGCAAGTCCAGAGACTGTCATTGGAAATTAGTATTTTTGAGCCCCTAAACATGGTCCCAGTACTGTGTTGGTACCAGTACTTCGATATTTAATCCCCAAATCTCCTTAAGTGTAGGATGATGTTATCTCTGTTTTCAGAAGTAAAGATGGTAGGATGAATCATGATTGGAAAAAGGGAAAAGTACATACCGTTCTATACTTCCTAGAGAATGAGTGGGGGAGAGGAGCATATCACAAGTTTGTCTGTGAACATCCTTGCAACTAACAGGAAGCAGGAACCAATCCGTTAATTACTAATTTATTGTTTAAGAGGACTTCAATTTCTTGAGAGAAGTTTGACTATTCCTAATCTAAAATAATGAGCTTTATTGTCAACATTTATGGTATATAGAACCATGAATTTCCTGGCTTAATGCCACATTGTAGTCTAAGAAGAACAATTTTTCCTCAAATAAGGAAGGAAACCATTTTGATTATCTAGATTAATCAAGGAAAAACTTCTGGACTATCAGAATGGGTAAAATGTAAATTGAAGGGACATATATTTTGCTAAGTATTAAATTGCCATTTTCTGGTGTGTACCCAGAGTTTAAATATTGTTTGCTGGTTCCGTTAGTAACCCATGCTTTGCTTTTTGCTTAATTGGGATTTAAGGGGTTAAGTCCAGGTTAAATGACATTAAGAGTATACATTAAGAGTATAACCTGGGTCAGCCTGGTTCGTTTACAATACAGTGCTTTGTTTTTAACATATCTTGTTTAACATGCAATTTTAAGTACAGTTTATCTGCAATATTTTGAAATACTAGGCACCTTTGTATAATTGTAGGATGTAGAGTTTTGGTTAAGAATAGATTACTAAATTACTTTTTCCCATGATTCCCTTATTTTTTTCTAAACAGAAAAATACACATTCACACATCAAATAATAATTGCCTATAATTCCACTACCTGGAGAAAAACCATTCTTATTTAACATCTTGTGCCATATCAGTTGGTATGTAAACATGTTTTATTTTTTTAAAAAGGATTGTATGATACACATTGTTCAATAACCTGATTTTTTAACTTGACATTTAGTACACATATTTCCATCTTAATAAATATTATTTTATATCCATGTGCCCATTTCCTATTATCTAACATTGTTTCCAATTTCCAACTATTAAGCAATGCTATGACAATACAAAGTTCCTGCAAATTCCTTAGGATACATTGTATACTTGGATACAGTGGTGGGTGGGTCAAGACAGTGCACATTTTTTAAACTTTGATAAATGTTGTCAAATCACTTCCAGTGATAAAAG EMBV3_23989 TCCCAGAGGGAACACAGATGGCTGTATTTGGAAAAACTGGCCACGCAGAAGTAGTCCGGG Variant GeneID:281312|MSRA:NM_174114:15_cdna 270^389 2 EMBV3_10241 GeneID:281312 8 GENE MSRA NULL methionine sulfoxide reductase A EMBV3_08511 AAGTGATAAATCGGGGGGCTTCATTCCAGTCCCTGCTTGACCCTCTCCCAGTTTTTGGCT Gene GeneID:614948|C7H19orf22:NM_001046548:95_cdna UTR3_Alt 2 NULL GeneID:614948 7 GENE C7H19orf22 C19orf22 MGC137387 R3H domain-containing protein C19orf22 homolog EMBV3_32060 CACCAGCAGCAGCAGCTTACCAACCTGCAGATGGCGGCTCAGCGGCAGCGGGCACTGGCC Variant GeneID:512824|PUF60:NM_001046133:74_cdna 223^273 2 EMBV3_21067 GeneID:512824 14 GENE PUF60 MGC128460 poly-U binding splicing factor 60KDa EMBV3_41650 CTGGAGTCTTATAGGGGTCGCGATCGCCTGGAGGAGGATGTGTTTGTCCGCTGTGTGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40099 GGTGTGCTCCCTGCTCGTGGCTGGGGTTTACCTGGTGGGAATGATAGATGGTTTGATAAA Gene GeneID:789288|LOC789288:XM_002693615:135_cdna Constitutive 0 NULL GeneID:789288 15 GENE LOC789288 NULL similar to olfactory receptor, family 5, subfamily W, member 2 EMBV3_29217 CACTGTGTCACCTCTCATCAGTGCCATGACCCATGACCTTGTGCCACTTACTGCCTCATA Gene GeneID:100137087|JMJD7:NM_001114658:106_cdna Constitutive 1 NULL GeneID:100137087 10 GENE JMJD7 NULL jumonji domain containing 7 EMBV3_39855 GAACTTCTCATCAGGGAGGCATTACTGGGAAGTCATGGTGGGAGAAAGAGCAGAATGGGG Gene GeneID:525584|TRIM58:XM_002689081:2_cdna Constitutive 0 NULL GeneID:525584 7 GENE TRIM58 NULL tripartite motif-containing 58 EMBV3_12933 TTGGCTCCCCTTACATGAGATACTGGGGGGAAGAGAATGCTTCCTGGCTTCATCGCACCA Gene BVT0102_140092 + 0 NULL GK000013.2:65230458-65233031 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045985 TCONS_00045984 TCONS_00045986 TCONS_00045987 TCONS_00045983 1 XLOC_026590 Coding TCONS_00045983 XLOC_026590 Coding Coding UQCC 13:65231478-65240674 j TSS33444 2414 3 TCONS_00045983_6 117 0.125103562551781 4 0.737901033170201 0.000916867158539143 6.93218500282001e-08 1.08123503442826e-12 0.000147520214989647 3.5823846209666e-05 3.71833030210521e-05 0.000175108924570113 1.54534976392743e-08 0.000148646058771836 1.47287812702645e-15 0.000175253531179929 7.08982704191909e-05 1.01819281958371e-05 0.000270850665734252 2.52194617776824e-05 0.00682347622251582 0.00276668940432538 0.0026975256877127 1.29696605736447e-06 0.000478453809075006 7.58393399992064e-35 0.00140435518049109 2.99400734939808e-05 0.00316048086489216 0.000266959756737645 5.94368353082283e-08 0.000212265123894934 0.000336899518131784 0.000611101709335532 0.00111077055993472 NM_001076508.2 UQCC Bos taurus ubiquinol-cytochrome c reductase complex chaperone (UQCC), mRNA. 0.0 1436 99.50 0.333471416735708 NM_018244.4 UQCC1 Homo sapiens ubiquinol-cytochrome c reductase complex assembly factor 1 (UQCC1), transcript variant 1, mRNA. 0.0 1626 81.51 0.7013256006628 TCONS_00045983_2 sp|Q9CWU6|UQCC_MOUSE UQCC_MOUSE Ubiquinol-cytochrome c reductase complex chaperone CBP3 homolog; 7e-64 199 93.94 0.98989898989899 1 coding 0 0 0 0 -0.0260215330494691 0.842500857682862 -0.00707310835211072 0.908081210030158 CCCAAGCAGAGACCATTTGTACTAAAGTTTACTTATCGCTCCCCACTTTGGGGATAGAATTGGAGGTTAATCCCTATATCCTGAAGAAGAACATGATGCTTATGACAAATAACTTCTATGCCGCAATCTTAGGATATGATGAGGGGATCCTTTCAGATGACCGTGGGCTGGCGGCCGCCCTCTGGAGAACCTTCTTCAACCAGAAATGCGAAGACCCTCGACAACTTGAATTGTTGGTAGAGTATGTGAGGAAACAGATACAGTACCTGGACTCCATGAGTGGTGAGGATCTGCTTCTGACAGGGGAGGTGAGCTGGCGCCCTCTAGTGGAGAAGAATCCTCAGAGCATCCTGAAGCCTCATTCCCCAACTTATAACGACGAGGGTCTTTGATGGGCTGGTCCCTCCGAACAGCTGGCCAGCTAGCTTTGAGGAACTGCCAGAAGAGAGGTGCCTGTTTGGCTCAGGATCCTGCAGGAAGTGGCCTGAACTGACCTTTGAACAGCATCTGTCAAATACCTGGCCCCATTTGTGTTGGTTTTCCTCTTAGTACGCCCAGGAGTCTGATAGGGTGGGGTACAGTGCTGAGAGAACCCGTAGCCCTTCTAAGGCGTCCTCTCCCTCAAGAGAAGCCCTGAGCAGGAGCTCCCTCACACGCTCCCCAAGTGCCCTCCAGAAACCGTGTAACTGACCACAGAAGGGAAAGGGGGTAGGTTCGATAGGGGACAGCTGCCTCCCCCCAAGGACCCACCGTGGCCTAGAAGCAGTGAGTAATGCTGCTGAATCAGGCTGGGTAACCACACACTGTCCTCCAGCTTTGAGCCATGGGCTTGAGTTGGCCATTAAAAGACCCAGAGACGTCTCTCTGCCATGGTTCTTCTTTATTCCCAGGTTTTTTAGAAACACACCTGAGGTGGCAGAGGCCATGAGTTGAGAAGCAGTGCCAGCTCAGAGACAGGAGCAAGGGAAGTTCGGGTGGGGTGGGGTCTCTGCCGCTGCTTCTGTCTCCAGTTCACAGAAATGTCAGTGTTCTTTCCTGCTGACCCCGTCCTCGGGGACCCAGGAGGCCTGTCTGGCCAGGGGGCTTGTCACATCCTGAGGCCTCAAGACAGTTCCCTTTGTCACACAAGGCCCCCACTGGACTGGGGTAGAGTCATGCTGTCTTTCCTCCCTTGGCTCCCCTTACATGAGATACTGGGGGGAAGAGAATGCTTCCTGGCTTCATCGCACCACCCCAGTACCCCGCTCCGTGCTCAGCCTACCACCCGCTTCCTAGCTTCCGGAGCACGTGCTGCAGAGCCCTCGTGGTCTGAGCCCCTGAGGACTAGTCTCCTCCCCCTGAGTGTGGGTCATCTTTGGGGGGATTTTCTTTAAATTGAAGAAGGGGGTGGAGAACCATATTGTCCCTCCCTCCCCCCACCCCCATCAAACTTCCTTCATTTAACTTGCTATAAAATGAGTCATATAAAGAAACTCTATATGGATGAGGTATATCCCACTTCTGTGAAAACATTACAAATCAAACGGCCTTCTCTGAGTTTATTTAAGATGCTTTTGTTGCACACGGAGCTCCAGAGTGAAGCCTCCTCTGTGTGTGTGAGATAATAACACCTTGTAACTCATTACAGCTGGGCACTATTTACATAAACCAGAGCCGAGCCAGGCAGGAATTTGCTGATTAATTTATTTTTAATGGAGTGAAGTATACCATGCACCAAAATAAACTTTACTGTGTGTACCTAACTGCTCCTGGAATGGATGGAAAAATTAACGGAACAGATTTTGGCTCCCAACTCTACACATTAATTTATATATAAAAGTTATTTGAGCCTTAACCCATTTGCTGCCCAGGGCAGCTCCCTAACCACAGAGCCCAGCCCACAGCCCCGGTTCAGCTACCGGGCTTGCTTTAGAATCATGGAATCTCTGATTTGGAAGGAACATTAGTGGTCATTTAGTTCAGCCCTGGTCCACAACTGGACTCCCTTTCTCAACATCCCTGTTGGCCTGTGTCCATACGGGCCCTCTGTGAATGCCTCCAGCAGCAGATGGTCTCCACCTGCAGGGCCAAGTCCTGTATCCACAAGATGAGTAATCATTAAACACTGCAACTTGTAATTCAGAGCCATGTTTCAAAAAGCCATGTCGATCTGTCACGTCTGTGATGTTTCCAAAGCCCTCGCTTCCTGGCCATGGGCATCTTGGAGGCTGCCAGGCTCTTCTTATTTTTGTGAGTCTCTAGCCCATTTCACCCCACTCCAGTACTCTCGCCTGGAAAACCCCATGGATGGAAGAGCCTGGTGGGCTGTAGTCCATGGGGTTGCTAAGAGTCGGACACAACTGAGCAACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCC EMBV3_00636 GAGACTCCACAGAGAATGTGCCAGGCCTCTTTGAGTGTTTGAGTGTCTCCTGTGGTGGCA Gene BVV0102_300840 + 0 NULL GK000013.2:74692960-74726665 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39121 GTTGAGGCAGCAGTGGATAGTACTCTAGATGAAACACCAGTGAAAAAGAAGAAAGGTTCC Gene GeneID:525027|PINX1:NM_001034553:14_cdna Constitutive 0 NULL GeneID:525027 8 GENE PINX1 FLJ20565 MGC127183 PIN2-interacting protein 1 EMBV3_10148 GACTTTGCCAAGGCATTCAGCTCTAAACCTCAGTGTCCCGTCTGTAAATGAAGGGGCTTC Gene BVT0102_276541 + 1 EMBV3_37817 GK000021.2:62772149-62793023 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121836 TCONS_00121834 TCONS_00121835 TCONS_00121837 TCONS_00121838 1 XLOC_073496 Coding TCONS_00121837 XLOC_073496 Coding Coding ATG2B 21:62789368-62870435 j TSS90662 11269 1 TCONS_00121837_8 1765 41 0.861495571509634 4.35780589929653e-06 0.000769414114170393 1.70707502690167e-07 7.64588333498462e-08 4.77881845484662e-08 0.000168195111418638 8.31660618664319e-05 0.000357844760476346 0.000598819725800895 0.000394752431225784 0.000128984488835189 4.7456358877689e-08 2.78943746787149e-06 8.93952704814689e-05 4.61802286511586e-05 3.59992909984502e-07 2.41438101069863e-05 0.000851112014075326 2.01106209823692e-06 0.00133389054537837 0.000132758055745402 9.1534142339932e-12 0.000277675703342885 0.000369920466099796 0.00019805826626419 0.00026212756367439 1.79025687426081e-09 0.000171318242779168 0.000142857895707493 5.96698245434452e-05 XM_005222199.1 ATG2B PREDICTED: Bos taurus autophagy related 2B (ATG2B), transcript 0.0 9972 100.00 0.490549294524803 NM_018036.5 ATG2B Homo sapiens autophagy related 2B (ATG2B), mRNA. 0.0 7319 88.61 0.502262844972935 TCONS_00121837_8 sp|Q96BY7|ATG2B_HUMAN ATG2B_HUMAN Autophagy-related protein 2 homolog B; 0.0 3364 93.33 0.984702549575071 2 coding 0 0 0 0 -0.0169060638465205 0.915928403038665 0.00842749381894264 0.872693431323239 GTGTGGCGTCACTTCCGCCTGTGCCCGGCGGCGCGCCGGCTGTCCGGGTCTCGCGCACGCGCCGCGCCGGGAGCGTCACAGAGCCGGGAGCGCGCGCCCCGCGGATGACAACAAATTCGTCGTGCGGGCGCTGTGGAGGTGTCCACCTCACTGTGGCCTTAGGCCCTGCCGTCTCCCCGCGTGCTCTCTTGTACCCTTCTCTACTGCCGCCAAGGACCCTCCTCGGAAAACCCCCCGGGCTTGGGACTAACGGGGACTCCTCCGCGACTTGTCCCCCCCAGGCCTAACGCGAGCGGCGCCGCACAGGCGATGGGGTCGCCCTGAGGGACGCTCGGAGCCGAACGGGCATGGAGGGGCCTCCCCGGGCTTAGGCTTCGCCGAGGCCTGGGCAGGCCGGCCCCGGGATCCGAGGCGCCGCCACCAACGCCGCCGCTGCCCCCGGCGCGGCCTGGAGCCGGAGCCTGGCCGGAGCCCCCAGGCCGGAGCCGCCCGCTGCCCTGCCAGCCCAGCTGCCAGCCCTCACCATGCCTTGGCCGTTTTCGGAGTCCATCAAGAAGAGGGCCTGTCGGTACCTCCTGCAGAGGTACCTGGGCCACTTCCTGCAGGAGAAGCTGAGCCTGGAGCAGCTCAGCCTGGACCTGTACCAGGGCACCGGGTCCCTCGCTCAGGTCCCCTTGGACAAATGGTGTCTCAATGAGATCCTGGAGTCAGCAGATGCACCTTTAGAAGTCACAGAAGGATTCATACAGTCAATTTCTCTGTCCGTTCCATGGGGCTCCTTGTTGCAGGACAATTGTGCACTGGAAGTGAGGGGGTTAGAAATGGTCTTCCGACCTCGACCCCGCCTAGCATCTGCTTCTGAGCCCATGTATTGGTCAAGCTTCATGACCAGCAGTATGCAATTGGCAAAAGAATGTCTTAGCCAGAAACTAACAGATGAACAAGGAGAAGGATCTCAGCCTTTTGAAGGACTTGAAAAGTTTGCTGAAACCATCGAAACAGTACTAAGAAGAGTAAAGGTCACTTTTATAGACACTGTCTTGAGAATTGAACACGTGCCAGAAAATTCCAAGACTGGAACTGCACTTGAAATTCGAATAGAAAGAACCATGTACTGTGATGAAACTGCTGACGAGTCCTCAGGAATTAACGTACATCAACCCACAGCTTTTGCTCACAAGTTACTTCAGCTCTCTGGAGTGTCTCTCTTCTGGGATGAGTTTTCTGCATCTGCAAAATCCTCCCCAGTGTGTTCAACTGTGCCAGTGGAAACAGAGCCAAAGCTGTCACCTAGCTGGAATCCAAAAATTGTTTATGAACCTCACCCACAACTAACAAGGAACTTGCCAGAAGTAGCACCTTCTGACCCAGTGCAGATAGGAGGGCTCAATGGTAGGCTGGAGTTGAGTCTCACATTGAAACAGAATGAAGTACTTCCTGGAGCTAAGCTGGATATTGATGGGCAGATAGACTCTATACATCTGTTCCTGTCACCCAGGCAGGTGCACTTACTTTTGGACATGTTAGCAGCTATTGCTGGGCCAGAAAATTCAAGCAAAATTGGATTAGCTAATAAAGATAGAAAAAACCGACCCATGCAGCAAGAAGATGAATATCGAATTCAAATGGAATTGAACCGGTATTATTTGAGGAAAGACTCCCTCTCTGCCGGTGTGTCCTCAGAGCAAAGCTTTTATGAGACAGAAACGGCTCGTACACCTTCTAGCCGGGAAGAAGAAGTCTTCTTTTCCATGGCTGATATGGACATGTCGCACAGTCTCTCTTCTCTTCCACCCCTTGGGGAACCCCCAAATATGGACCTTGAGTTATCATTAACTAGTACATATACAAACACCCCAGCAGGATCTCCATTAAGTACTACTGTGCTTCAGCCAACATGGGGAGACTTCCTTGATCATCATAAGGAACAGCCAGTCAGAGGATCAGCGTTACCCTCCAACCTGGTTCACCCAGCATCTTTACAAAAGACTGCTCTCCCCTCTAGGTCTGTTTCAGTGGATGAATCCAGGCCTGAACTTATTTTTAGAGTAGCTGTGGGAACGTTTTCAATCTCTGTGCTTCACATTGATCCTTTATCTCCACCTGAATCATCACTGAATGTTAATCCATTGACACCAATGGCGATAGCTTTCTTTACTTGTATAGAAAAGATTGATCCAGCACAATTTTCAACAGAAGATTTTAAGTCTTTCCGAGCAGTATTTGCAGAAGCTTGCTCACATGATCACCTTAGATTTATAGGCACTGGCATCAAAGTGTCCTATGAACAAAGACAAAGATCGGCGTCCCGATATTTCAGTACTGATATGTCCATTGGGCAAATGGAACTTTTGGAATGCCTGTTTCCAACTGATTCTCATTCTGTTCCTCCTCACTATACAGAGCTTTTGATGTTCCATTCCAAAGAACGAACTGATTCTCACCTCCCTGTGTGTCTTCAGCTTCATTATAAGCATTCTGAGAATAAAGGACCTCAGGCTGGTCAAGCAAGACTTAGTTCCATTCCTCAGAAGGCAGAATTACAGGTTAAGTTAAATCCAGTGTTTTGTGAGCTGGATATCAGTATTGTGGACAGGTTAAATTCCTTGCTTCAACCACAGAAACTCACTACAGTGGAGATGATGGCATCGCATATGTATACTTCATATAATAAGCATATTAGTTTGCACAAAGCTTTCACTGAAGTATTTCTAGATGATTCACATAATCCTGCAAACTGCCGGGTATCAGTACAAGTTGCCACGCCAGCATTAAACCTTTCTGTTCGCTTCCCAATACCTGATCTTCGGTCAGATCAAGAGAGAGGACCATGGTTTAAGAAGTCACTTCAGAAGGAGATTCTTCATTTAGCATTCACAGATCTAGAGTTTAAAACTGAATTCCTAGGAGGATCAACCCCTGAACAAGTTAAATTGGAACTTACATTTAGAGAACTAGTCGGGTCATTCCAGGAAGACAAAGGAGAACCATCTATTAAGTTTTTCCATGTGGCTAGTGGAGGAGATGGAGATACAACGTCATCAGATGACTTTGACTGGCCGCGAATTGTACTAAAAGTGAACCCACCAGCCATGCATTCCATTTTGGAGAGAATAGCAGCTGAGGAGGAAGAGGAAAGTGACGGCCACTATCAGGAGGAAGAGGAGGGAGGCGCTCATTCCCTGAAGGATGTCTGTGATCTGAGAAGGCCAGCTCCGTCTCCCTTCTCTTCCCGTAGAGTAATGTTTGAAAATGAACAGATGGTGATGCCAGGAGACCCTGTAGAAATGACAGAGTTTCAGAATAAAGCAATCAGCAATTCTCACTATGTGCTGGAACTTACATTACCCAATATTCATATAACACTACCTAATAAAAGCTTTTATGAGAAGCTTTATAATAGGATCTTCAATGATTTGCTGCTCTGGGAACCAACAGCTCCTTCGCCAGTAGAGACATTTGAAAATATTTCGTATGGTATTGGGCTTTCAGTAGCCAGTCAGCTGATTAATACCTTCAGCAAGGATAGTTTTAGTCCGTTTAAATCTACAGTTCACTATGATGAGGAAAGTGGATCTGAGGAGGAGACTTTGCAGTATTTTTCTACTGTTGATCCCAATTATCGTTCTCGTAGGAAAAAAAAACTAGACTCCCAGAACAAGAACTCACAGAGTTTTCTCTCAGTTCTTCTGAGTATTAATCATGGGTTAATTGCAGTGTTTACAGATGTAAAGCAAGATAACGGAGATCTGTTGGAAAACAAGCATGGTGAATTCTGGTTAGAGTTCAGCAGCGGCTCGTTACTTTGTGTGACGAAGTATGAAGGCTTCGACGACAAGCACTACGTGTGCCTTCACTGCGGCAGTTTCAGCCTCTACCACAAAGGCATAGTGGATGGAGCAGTTCCTTCTACAGAAACACGACTGCCTAGTTCAACCCGCCCACATTGGTTAGAACCTACTATTTATTCCTCTGAAGAAGATGGCCTCAGTCGAGCTTCTTCAGATGGTGTTGGAGGAGACACTTTGAATATGCTGTCTGTTGCAGTTAAAATAGTGTCTGATAAATCAGAGTCCAATACAAAGGAGTTTCTCATTGCTGTAGGGCTAAAAGGAGCTACTCTCCAGCATAGAATGCTTCCTTCTGGGCTTAGCTGGCATGAGCAGATTTTATACTTCTTGAATATTGCTGATGAACCTGTTCTGGGATATAATCCTCCAACTTCATTTACAACCTTTCATGTTCATCTCTGGAGCTGTGCACTTGATTATAGGCCTCTTTATTTGCCAATCCGATCTCTTCTTACTGTTGAAACATTCAGCGTTTCAAGTAGTGTCGCCTTGGATAAATCATCTTCTACTCTCAGAATAATTTTGGATGAAGCTGCTTTACACCTGTCTGACAAGTGTAATACTGTTACTATAAATTTGAATAGAGATTATGTTCGTGTGATGGATATGGGACTTTTGGAATTAACCATAACTGCAGTAAAGTCTGATTCCGATGGAGAGCAAACTGAACCGCACTTTGAATTGCACTGTTCGAGTGACGTCGTCCATGTTAGAACGTGCTCAGACTCTTGTGCTGCTCTAATGAATCTAATTCAATATATTGCAAGCTATGGGGACTTACATGCCACTAACAAGGCAGACGTGAAGCCAGGAGCTCCTCAAAGAAAGGTGAAGGTAGATTCTGTTGGTCGGTCATCCTCACGTGGTCCAGTACTTCCTGAAGCAGATCAACAGATATTACGAGATTTGATGAGTGATGCTATGGAGGAGATTGACATGCAAGAAGCAGCTTCATCTGTAAAACCACAGTCTAATGGTGTTTCTGATGAAAAATCTCAAGTTCAGGAACCATGTTGTTCAGACCTCTTCCTGTTTCCTGATGAGAGTGGAAACGTGTCCCAGGAGCCTGGCCCCACTTACGCCTCATTCACCCACCACTTGATTAGTGATGCAGTGACAGGCGTGCCCACGGAAAATGACGACTTTTGCATTCTTTTTGCACCAAGAGCAACTGTTCAGGAGAAGGAAGAAGAACCAGTTGTAAAGATAATGGTTGATGATCCAATTGTGATAAAAGAGAATTATTTTAGTCTGCCTGTTAAGAAGACAGATACGAGCAAAGCCCCGTTACACTTTCCCATTCCTGTCGTTCGGTACCTGGTTAAAGAAGTCTCTCTTGTTTGGCATCTTTATGGAGGAAAAGATTTTGGAACAGCCCCTCCTACTTCTCCAGCTAAAAGTTACATTAGTCCCCATAGCTCACCTTCTCACACACCTACAAGACATGGACATAATATGGTTTGTGGGGGAAAAGGAAGAAACCATGACTTTTTAATGGAAATACAGTTAAGCAAGGTGAAGTTTCAGCACGAGGTGTACCCGCCCTGCAAACCAGAATGCGAGTCGAGCCTTGTGGAGCACCCGGTGTCCCGGCAGGTGTTCATCGTGCAGGATCTTGAAATTCGAGATCGTCTGGCAACGTCACAAATGAATAAATTTTTGTACCTGTATTGCAGTAAAGAAATGCCTCGGAAAGCTCATTCCAACATGTTGACAATTAAAGCACTACACGTGCGTCCAGAGTCTGGCAGGTCCCCACAGGAGTGCTGCCTCAGAGTATCACTAATGCCACTTCGCCTCAATATTGACCAGGATGCCTTGTTCTTCTTGAAGGATTTCTTCACAAGTCTTTCTACAGAAGTAGAGCTGCTCATGACTCCAGATCCAGAAGAGAATTTAGATTCACATCAGAAGTTCCTATTCGACTTGATTATCATGGGAAACATGTATCAATGGATCAGGGTACATTAGCTGGGATTTTGATTGGTCTCGCCCAGTTAAACTGCTCTGAACTAAAGCTGAAGAGGCTTTTCTATCGGCATGGTTTGCTAGGTGTGGACAAATTATTCTCATACGCAATCACCGAGTGGCTTACTGACATTAAGAAGAACCAGCTGCCAGGAATCCTGGGAGGTGTTGGGCCTATGCATTCACTAGTACAGCTAGTGCAAGGCCTCAAGGACTTGGTCTGGTTACCAATTGAGCAGTACCGAAAGGACGGCCGCATTGTCAGAGGGTTTCAGAGAGGGGCTGCCTCCTTTGGCACCTCGACAGCAATGGCTGCTCTCGAGCTCACGAACAGAATGGTTCAAACCATACAGGCAGCAGCGGAGACTGCGTATGACATGGTGTCTCCAGGCACCCTTTCTATCGAGCCCAAGAAGGTCAGGAGGTTCCCCCATCACCGGTTAGCCCACCAGCCAGTGGACCTGAGGGAAGGGGTGGCCAAGGCCTACAGTGTCGTGAAGGAGGGAATCGCAGACACGGCTCAGACCATTTACGAAACTGCTGCTCGGGAACACGAGAGCCGGGGGGTGACGGGCGCCGTGGGGGAAGTCCTGCGCCAGCTCCCCCCGGCCGTGGTGAAACCTCTGATCGTCGCCACAGAAGCGACATCGAATGTCTTGGGTGGCATGAGAAACCAGATCAGACCAGATGTTCGGCAGGACGAGTCGCAGAAGTGGCGCCATGGGGACGACTGATGTTTCAGACGAGATTCTTGATGAAGACGAGGGGGGAGATGTGGAGCAGAGGGCCCCACCGGCGACTTCAGAGGGAACTCATTTACTGTTACCGTGCTCATCTCAGGAACAAAACCATTTCTTAGTGAGATAATATAGTATCAAAGCAACATGCAACCAAAACCTTTTGACATTTTAGGGCTAGTTGGTACTTTCCAGTAGACATGTTTGGTGGCTGGTGTCAAAAGTCCGTAAAGCATTTGCTGCCAAGTTAGTGGAATGCTTGCTTTTATTAAAATGACTGTAATCTTCCTTGTTACAGACAAGCTATCATTGGAAACCTCCTTTTACAGTACAGGGTGCTCAGAAACGTTTTGAGTACTTTGAAAGCACTATATTTATGTTGCTCCAAGGAGTTGATTTTTCTCCAGGTTTAAAGAGAATCACAGCTTCGAAACTTTCATTAAAAATGAGAGACAGAAGCCACAGGGAAAATAAAGCAAATAGGATTTTCAATATAAATATCAGTGAGGAAAAAATATCCCAGTCTGTTGGAGTTAGTGTTCACGCAGTCAAGAACGTCGTTTCCATTTGCTCAGAAAATCCTTCCATGGGAGTTTGAGAACATGAATGTCGCAGACTTGTTCTGTTGTGTTGCACTTTATTATGTGTGTGTGTGTGTGTTTGTGTGTTTAGATTAATACAAGTCATGTGCTATATTCTACATGTAATTTACAGAGTTACACAAACTATAAAGAGGACTAAGTCTGAAGGTTTTTGGCAAAGGAAGGTAACTCAAATGCAGTAACTTTCATTTATTCTAAGTATAATGAAAATGTGCATTCTGTGATGAACTGGGGCCCATATAATTGTTTATTTGTTCAAATTTAAGCAGGTATAGTGCAAGCTTATTAGGCGTATGTGGAAAGGGAGATTGAACGTGGTTTTTACTCTTTTGAAATTAGCCAAAAATCCTCCAGATATGCCCTAGTCAGCTATTTCGAAGCACCATTTTTACTTGGTTAACAATGTACATTTTGATATTCTGTCAGGAATGAATAAAGTATTTTTATTTAAAGGTAAAGTTGTTTTATGCTTCCATGAATATTTTGCTTCTCTTAGAGCATATTCATAGATGCAATGCTAGGGTTTACTCCAAAATCCTTGGGAACACTTTCTCAAAATTGATTTTGCTTAATGTTAAGCAGATCATTACCTAGATGTGAGAAGGAAATGGTTCTCCAGAACTCTGTCTTTGACTTTAGATTAATCTAGCAGAAAGAAAACATAGGACTTTGTATTCATCCTCTAAAGTGTCATGATGTGAACGCTCTCATTTCCTAGAATAGGGAGATGCATTCGAGTTGAAGTTGAATTTCAGAACTACTTTCAGTTTGGGGTTTGAAAAATGACATTGAATCAGTTTCATTCTTGAAACTTTCTACAAGAAAGCAAAAATCCGAACATTTAAAATTTGTAAAATTTTGTTAAGTAGCATGTAATTCTGTCTTGTTCTCTTTTTACTGCTGGAAAACTTGAAAGGCTAGTGCTCAGAAAACCACCTACTGAACCATCAGAGGACCATTTGTTACTGGAGCCCAGCTGGATGGAGCCCACCTAGAATGTGGTCCTGAGTACACACGAATCATGGCTGTTTACTGTATGAAGCTTCAGCCTGCTTCTGGGGCGCTCTCTGGGCACCCTTGCATCAATCCCAGCATTTTCCCTTACATGGAACATGCTGGGTATGGTATCTGTGATGAGTAATCAAACTGAAAACCACTCAAATTTAAAAATATAAAATCTCCTTAACTTTTAAATATATTTTCCATATTGTATCTAATTGAACTTAATTAGTATAGGGAGAAATAATCATCCTCTTCTCTGAACTCTGAGTTGCAGATGGACCGATTTTTTGACAAATTGGGTTTATAAGTCCCATTAAGCATATCTTTATTATGTAATTTCCATGGCTGTCTCTTCTGCCCTCCTGCACCTGCTTTTGATAGAATCTACCTGTGTGATCAGAAACCTTGTGTCTCAGAAAGATTTAGTGTCAAGGGTCTGTTCATTGTCACTTTAACCAAGATTCTGTTTACCTGAGGTGTTTACGTGGAAGAAGTGTGTGTGTTTGAACTTTGCCATTGTTAAATATCCTTAATTTTTTTCTTTTTTAATAGCGTCTTTTCAAACTTTTACACCATGCCGATACAGTAAAGAGTGTTGGCAGGATGCTTGTGCGGCCAGGTCTGTGACTTACCAAGTGACTTTGCCAAGGCATTCAGCTCTAAACCTCAGTGTCCCGTCTGTAAATGAAGGGGCTTCTTATGACAGCAGAGATTTTCAGATGATTGGAGCATGCACACGTGTGCGAGCAAGCATGCAAGTGGGAATGACGGTGTGGGATGAAGCACTTAGTCGTGGGCCCCAGGCCTGGGACACCTTGAATAGGTGGCATTGTCTAACAAGAGCCCTGGCTGCATGGCACCCACGGAAGCCCCAGCTCCTCCAGGTCTCTCATCTCTTAGACTAATGTGTTTGTGAACGGTGCCTTCAAGGCTGACCTCTTCATGGGGCAGACTGAGCATGTCTGTGTATCACTGCATTGAGTCTGTGTGTGTATCTCCCCGAGGGTCCAGGTAAACAAGCTTGATCAGGAAGCATCAGTGAGTTTCAGAACCTCCCAGGGTTACAGGAACACAGTAAGACCGCCTTACATTATAAAGGCAGCAGGGGCCATGGTGACGTCTTCTCTTGATTCGGGTTGATTGGGATCCCCTGGTTTCCCTTCCTGTCTGTCCACAGATGGCTATCATTTACAAGTACAATGTCCGCTCAGCACTCGCCTTTTAGGACAGATAGGATGGCATATTTTTTTGTAGATATCATAGCAAAGACTTCCATTTTAGTAAAGCTTGAGTCCAACTTGGATTCCCATTAAGCACATGTATGTAACATCAATATTTTTATAATACAGAACTCGAGAAAAAAAAAAAATCTTCCCAAGTAGCCATGTGCCTAAAATGGCAAAAAGACAAAACACTAGTATCTCTTGCTCCTGCTATGTGTCACTTTTAAATGCTGTTGAAATAGTTTCAGTTTTAAGGGAATAACTTTTTAACCATCTCCTTAAAAACTGTGTCGTGTAGGTTTGGTGCCTTCGTTCAATTCTCGAACAGGCCAAACAACTACGCCCACTACCTGGGGGCCACTCGCCACCCGCGGGCACTGTCGAGTCAGCTCGTGTGCCCCAAGCTTGCCCTCACCAGAGACGAGACAGGGCAGAGGTGGAGTTCAGCAGTTTTAAACCGGAAGTCCACACTTGCACTAAGTAGTTTTAGGATTAACAATTTATTATCTTAACATTAATTTAGATCTTATATATATATATATATAAAAGCCACATGACCTGACTTAAGAATAATCATTTAACTCTGCTTTGCTTCAGTTTTCTCAGACCTTCGTGGGGTGTGTGTCCCCAGCTTCATGGGGACTGTGGCAGGGGTAGTGGTCTGTGGTGAGCAGTCTATTCCCTGCTTCCCTTCACGTCCTCTTGACATGACCTAAGACATGAGAGAAAACGTCTGTAAAGTTCTTTAAGCCTCTTGAAAGTAAAAGGCCCTATGCAAATACAAAGTGATACTTGGTATCGGCAGATGCATCAATTGGAGGGACCCATTGGTACCAAATTGAATAAATCAAATACAAGTTTGTGAGTCTCAGGTAGAAAAGGAAAGTTGTTTAGATAGTGTTTAGATAGTGAAGGGGGAGAAAAAAGATTTTTTTTTCCCCCTTACCACCAAGAAATCTTGTTTCTTTTTATGGAAAATACAGTCAGTCTTTTCATTGAGAATAACTGAGTGCTTTAATGCATTTTATTTTTATCGCAATAGTTTCAGGATCATGCTAGGCACTCTGCTCCCTGTAATAGACTTTATATGCACAGTTGCAAGTCAGTCAGTTTTAATCAAAAGAATTTCCTTTTCATGGTAGTGTCTACAAGTCAAAGAGAAGGCCGTCTAGTACATCACAATTAGTTTCTTTGTGGCGAGGGATAAGAAATTTATGTGAGTTTCAACAATTCATATTTTGAAATGTCAGTAGTTTTGAAAAACAGAGGTGTTACACATTTTTTTGCCTCCTGTACCCAGTGTCAGCCCCTTGGTTTCAAGCACGTAGCCTCATAGAAGACACCAGAGTGCTATCTGATGTATTATTTCAGGAGATTGTAGACTTGATACTGGCTGACTCAAGGACATCTCTAGTGCTGTGTGTGTTGGGAGGGAGGGGAGGTGGGGTTGAAATGGCAGCCCCTCCTTTAAGAGTATGTTTACTTTGCTGTTTCACATGTATTTTGTGTATATGAAATGGCAGCTTCCAATTTCTAGTTGGATTTGTCTTATGTTGTTTGTATAATTTGCCATCACACAGGACTGTTTGCTTTTCCATTGTGAAATTTGGTAGGGACTCCAGTTCAGCTCTTAATGTTAATCCATCCCGATTTATTTTGGACATTGAATTGATCTCACCACAAGTAAAAAACACGTCGTGTATGTTGACTGTCGTCGTTGCTGTTTCCTCATGGAAGTAATTCTAAATGTAAATACTTTAAGAATACTGATGCTGTATGAGTATTTTTGTGGCAATGTTAACTTGTTAGTGTGACTATTTAAAGTATTATGAATTTAAGGATATTCTTGAAGAAAATTAAAATATTTACTCTTTGGAGTTTGCTTT EMBV3_30367 CGATGAACCCGGACCACAACGCTCTGTTGAAGACGTACAGGATATCTAAAGGGGTATACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35477 TATATATGGAATTATGGTGCCCTCCCTCAGGTTCTTTCTCGTGGAGAAGTTGTTCATGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11227 AAGGGTTCTAGACCGGAAACCCCCTCCCCCTGGAGCCTCAATAACTCGTTCTGACTATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01285 GAAGCAGAAGCTGCCAAGAATGCTTTGAATATGAGCTCACAGTGCCTGCACTTTACCCCA Variant GeneID:614417|RBPMS:NM_001046535:28_cdna 501^651 2 EMBV3_21704 GeneID:614417 27 GENE RBPMS MGC137681 RNA binding protein with multiple splicing EMBV3_19196 GATGAGAGCCTCCTGGACAAGCTCTGCGCTGCACTGGATCAGCAACTCACTGACCTAAAA Gene GeneID:523244|LOC523244:XM_002689507:110_cdna Constitutive 0 NULL GeneID:523244 8 GENE LOC523244 NULL similar to IFN-alpha EMBV3_40663 TCCTTGTACTTCACTGGACTTCCCTCTCTCCTCCCACAAGTCAGATGCCTGAGAAAAGCT Gene GeneID:539495|LOC539495:XR_084560:363_cdna Constitutive 0 NULL GeneID:539495 10 PSEUDO LOC539495 NULL similar to hepatitis C virus F protein-binding protein 2 EMBV3_20085 GAAGCGTTGGCGCAATGGAGGGACTGGAAGTATAAGCCGCCTGCACTTAAGAAGTTTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20820 TACATTGGGGTGATGATGCTGACCTTGACTCCCAGCATCCTTGCTGAACTACAGCTTCGA Gene GeneID:523039|HTRA2:NM_001077956:41_cdna Constitutive 0 NULL GeneID:523039 11 GENE HTRA2 NULL HtrA serine peptidase 2 EMBV3_23633 GTCTCTGCCTGCTGCCAGCCTGGGCCGTGATTCTTAGACACTGTTTTGTATGGTCTTTTA Gene GeneID:514441|CECR5:XM_002683627:1_cdna Constitutive 0 NULL GeneID:514441 5 GENE CECR5 MGC128618 cat eye syndrome chromosome region, candidate 5 isoform 2 precursor EMBV3_26974 TTGACTGTGGTTTCTCTAGAAAGCCTCCATGCTAACCATTCAGGAGCGTGGAAGGGTCTC Gene GeneID:536863|MPDZ:XM_002689585:17_cdna UTR3_Alt 2 NULL GeneID:536863 8 GENE MPDZ NULL multiple PDZ domain protein EMBV3_31306 TACATTTACGGGATCTCCAGGCGGCCCAGAGATGAATCTGGCTATAGGTGGACGAGAGAT Variant GeneID:532695|PPHLN1:NM_001075972:24_cdna 70^161 1 EMBV3_08216 GeneID:532695 5 GENE PPHLN1 MGC139752 periphilin 1 EMBV3_15958 GCACCATTACAAATAAAGAAATCAGAACTACAACCACTACCGCCCCCAGGCACCCACTGA Gene BVT0102_206054 - 1 EMBV3_18153 GK000012.2:53156626-53213384 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13995 TACCACCGGGACTGGTAGAATGAGGCACCTAAAAATTGTATACCGCAGATTCAGGCATGG Gene GeneID:768317|RPL37:NM_001078132:89_cdna Constitutive 0 NULL GeneID:768317 20 GENE RPL37 MGC126982 ribosomal protein L37 EMBV3_35870 AACTGGATGTGGAAAAGGTTGAGGGTGAGCTTGGAGATGGCCCTGATGGGAAAGGGAAGA Gene GeneID:505725|PAGE4:NM_001081580:39_cdna Constitutive 0 NULL GeneID:505725 X GENE PAGE4 MGC157399 P antigen family, member 4 (prostate associated) EMBV3_33476 TCATCTGGTGATTTTATATGTATGTGAGGTGTTTCAATTGGTGTTATTCCTTTAACTGAC Gene GeneID:504339|C14H8orf47:NM_001077844:18_cdna Constitutive 2 NULL GeneID:504339 14 GENE C14H8orf47 C8orf47 chromosome 8 open reading frame 47 ortholog EMBV3_09985 AAGGACCAATCTGAGAATTTGGTTTATGTATGGATTTTTTGTCCAGGCAGATCTGGAAAG Gene GeneID:614311|CCDC76:XM_002686170:328_cdna Constitutive 2 NULL GeneID:614311 3 GENE CCDC76 MGC137577 coiled-coil domain containing 76 EMBV3_21510 ACCAGTTCTTTGACCTATGGCTTGACATGGCTGATTTGAGAGGTACAGCTTCCCACCACC Gene BVT0102_208084 + 0 NULL GK000003.2:14413368-14493920 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168536 TCONS_00168543 TCONS_00168537 TCONS_00168540 TCONS_00168542 TCONS_00168541 TCONS_00168534 TCONS_00168538 TCONS_00168539 TCONS_00168544 1 XLOC_103130 NonCoding TCONS_00168534 XLOC_103130 NonCoding NonCoding LOC100848574 3:14457369-14477768 j TSS126380 701 1 TCONS_00168534_1 47 4 0.965829983331699 2.84793381981462e-22 1.57886970831406e-11 1.37573338648453e-14 0.000120716331585175 0 0 4.86763862217455e-12 1.12504366596112e-10 0 0.000146844286634732 6.06237670994404e-05 0.000280398287213062 2.5666523189607e-09 1.61123418593521e-09 1.22628031202473e-05 0.016448672923917 0.00402971794613385 0.0231409973491316 6.00679221009375e-05 1.50059414652324e-08 0 0.00559496989685418 0.00253042289259042 0.00518220600450023 1.97374287473346e-09 3.12624405025377e-20 0 0.00063067647305544 0.000478230423126126 0.00021619255062725 NR_045653.1 LOC100848574 Bos taurus uncharacterized LOC100848574 (LOC100848574), transcript 0.0 915 99.80 0.726105563480742 XM_005244829.1 C1orf61 PREDICTED: Homo sapiens chromosome 1 open reading frame 61 (C1orf61), transcript variant X1, mRNA. 2e-45 187 72.91 0.462196861626248 0 noncoding 0 0 0 0 0.0276356322282813 0.855534054455872 0.0609987925495837 0.219682448038141 GGTGTCATCGTAGGTGTCCACCTTTGGCTTTGGGGGAAATTTCATGATCTTGCTTATTCCTGTCTTGGAAAATCCTTTCCAATGTCTAACCAAGATCTGTACTGCTGAAGTACCAGTTCTTTGACCTATGGCTTGACATGGCTGATTTGAGAGGTACAGCTTCCCACCACCCAGGAAGGAAGGAACTGGCCTGGATTTTGGCAACCTCTTGCTTGTACCAAAAAGAAGAACCTACTTCATCCAGTTGGCTTCAGTGCCCTGTGAGAAGCCTTCCTGATTGACGGAAAGATGAGACTAAATTCTAGCAAGTTGAGTGGCTCCTTCAAGAAGCCTGTGTGCAGGGTAGAAGTGGAGAGGCCATAGCCTCCAGCCTGGGCAGCCCATTGGCACCTGGAGCCACCTCAACTTTGCCTCCCCTTTGCTCCTGTGTCTATAAGCTGCCCAGCCCAGCCCGTCCTGGTTTCTCCTGTGTCTTCTGAGCTGAGATTTCTCTGAGATGGAAGCCCCATCCCATGTCTAATAAAGACTCTTGAATACTGAACAACATTACTGGTGGTAGTGGGTGTGCCTGGGCAGGGGAGGGGCTGGATGAGAAGAGACTAGTTACCAGGCTCCCTCTGAGACACGGGTCCCCTACCTCTGGGATCTAAGGCCTGATGGTCTGAGGTGGAGCTGATGTAATCATAATAGAAATAAAGCAC EMBV3_33292 CTTGAAACCGCTGACTGTGTATTGTGTCAAAGCCAGAGCACTCATTGAAAATGACAGGCG Gene GeneID:282257|IFNAR1:NM_174552:16_cdna UTR3_Alt 2 NULL GeneID:282257 1 GENE IFNAR1 NULL interferon, alpha; receptor EMBV3_16842 AGGTGAAGATCGGCCGCAATGGGACGCTAACCTTTGGGGATGTGGATACGAGTGATGAAA Gene GeneID:505848|LOC505848:XM_002691003:316_cdna Constitutive 0 NULL GeneID:505848 10 GENE LOC505848 NULL similar to transcriptional regulating factor 1 EMBV3_16969 TTTGTACTTGACTGTGGATCCTTACATGAGAGTTGTGGAAAGTAAAAATTCAGCCTTCCC Variant GeneID:513177|PTGR1:NM_001035281:5_cdna 191^247 2 EMBV3_36264 GeneID:513177 8 GENE PTGR1 LTB4DH MGC127457 prostaglandin reductase 1 EMBV3_41092 AAGGCCTGTCACCCCTTCGTCTACGGTGGCTGCGGAGGGAATGCCAACCGTTTTGGGACC Gene GeneID:507133|COL7A1:XM_002697051:523_cdna Constitutive 0 NULL GeneID:507133 22 GENE COL7A1 NULL collagen, type VII, alpha 1 EMBV3_17632 GTCCTGGGACCTGGTCTGCCTAAGTTTCCAATGAACATAAAGTACTCTGGCTCTCAGAGG Gene BVV0102_249719 + 0 NULL GK000023.2:8427459-8434566 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26803 TTAACTCTGCTCTCGCCAGTCACCACCAGCCTGACCTCATACACTTCAGTACAATGGAGT Gene BVT0101_041501 - 1 EMBV3_19285 GK000005.2:97675031-97754722 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192916 TCONS_00192918 TCONS_00192914 TCONS_00192917 TCONS_00192913 TCONS_00192915 TCONS_00192919 1 XLOC_117310 Coding TCONS_00192915 XLOC_117310 Coding Coding DUSP16 5:97722634-97778284 j TSS144272 1088 1 TCONS_00192915_2 203 0.0551470588235294 5 0.980538733849665 0.00216395197668392 0.00229885985858979 0.000661907422170301 0.000246922734383255 0.00193784572431228 0.000654013218164475 0.00121780179105482 0.00216210327724757 0.00133415356250148 0.000240390338209969 6.30705518060731e-10 1.22878258466345e-17 0.000366259442793883 0.00065035443502636 4.47841890894069e-08 0.00288718882743954 0 0.000311272927512668 0.000503168821507538 0.000412122692479956 0.000288627968870959 3.17794747854367e-08 0.000621829959996031 3.29506409374573e-08 0.00116612897377914 0.00298861153348322 0.000329778205904854 0.00080987419606314 0.000261607074521819 0.00148799660981803 XM_870975.6 DUSP16 PREDICTED: Bos taurus dual specificity phosphatase 16 (DUSP16), 0.0 1819 100.00 0.925551470588235 NM_030640.2 DUSP16 Homo sapiens dual specificity phosphatase 16 (DUSP16), mRNA. 0.0 1353 93.64 0.819852941176471 TCONS_00192915_2 sp|Q9BY84|DUS16_HUMAN DUS16_HUMAN Dual specificity protein phosphatase 16; 3e-121 362 97.75 0.87192118226601 1 coding 1 0 1 1 -0.0979204312687093 0.588131246320836 0.0172793873968438 0.749130877973011 TCAGAACAAGACATGAATAACCCATTTCACAGATGAAGAAACTAAGACCTTAGATTAATTTATCCAAATCCCAAAGCGAGTGGACCTGGAGCAAAGACCTTCTGACTCATTCTCAGGCTTTTCAGCCCCGTGGCAAGCTGTTGGAGCGAGGGAACAGAGGTAAAGAATGATGTAATGCACTGGCCGCCCCAAAGCATCTTTTGTTGGAATGGTTATTCCAGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCTTTGTGGACGGAGGCCTTTGCGAGAACACATCAACGGGAAAGAGAAAGAGACATTCACTTGGAGGGCTCTCGCCGAAAATGGGTTTAACTCTGCTCTCGCCAGTCACCACCAGCCTGACCTCATACACTTCAGTACAATGGAGTGGCTGAGCCTTTGAGCACACCACCATTACATCATCGTGGCAAATTAAAGGAAGAGGTGGGAAAAGAGGACTTATTGTTGTCATGGCCCATGAGATGATTGGAACTCAAATTGTTACTGAGAGGCTGGTGGCTCTGCTGGAAAGTGGAACGGAAAAAGTGCTGCTAATTGATAGCCGGCCATTCGTGGAATACAATACGTCGCACATTTTGGAAGCCATTAATATCAACTGCTCCAAGCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTTAATTACGGAGCTCATCCAGCACTCAGCCAAACATAAGGTCGACCTTGACTGCAGTCAGAAGGTTGTCGTGTATGATCAGAGCTCCCAGGATGTGGCCTCTCTGGCTTCAGACTGTTTTCTCACTGTCCTCCTGGGTAAACTGGAGAAGAGCTTCAGCTCTGTGCACCTGCTCGCAGGTGGGTTTGCCGAGTTCTCCCGCTGTTTCCCTGGCCTCTGTGAAGGAAAGTCCACCCTAGTCCCCACCTGCATCTCTCAGCCTTGCTTACCTGTTGCCAACATCGGGCCAACCCGAATTCTGCCCAATCTCTATCTTGGCTGCCAGCGAGATGTCCTCAACAAGGATCCACCCATTGATGCCTTGAGAGGAAATGAAGACTGGGCTTATGGAAGCTGTGGTAAACAGCTTGAACAAGGTCGT EMBV3_37003 ATGCCCACTTCTACTCCCTGATGGAGACACACTGAGACGGGAAAGGAATCATCTACTGCA Gene BVT0101_037846 + 0 NULL GK000020.2:31697455-31727519 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113715 TCONS_00113711 TCONS_00113714 TCONS_00113716 TCONS_00113713 TCONS_00113712 1 XLOC_069104 NonCoding TCONS_00113712 XLOC_069104 NonCoding NonCoding LOC100848479 20:31718917-31726698 j TSS84999 2649 2 TCONS_00113712_6 118 0.0656851642129105 2 0.659768637532134 0.000550155533106904 0.000381232249827704 0.000306954083030482 0.000176666683622043 0.000609241958426906 6.8932858263462e-10 0.000117608949959865 0.000580317050838003 0.00127317213810662 3.93791853378164e-16 4.48807496804615e-46 1.14262265696718e-20 5.81405850262894e-05 9.7520386003636e-06 7.92273580975044e-05 0 8.99592406143449e-27 2.16764877749021e-10 0.000882611970073318 0.00113701569302722 0.000614949516417136 6.96268514768022e-15 1.45531035260467e-81 4.40245916047435e-79 0.000213188325178619 0.000108893733890502 1.64854699929263e-05 2.77317620429136e-54 1.29441677813818e-24 0 XM_005204165.1 KCND3 PREDICTED: Bos taurus potassium voltage-gated channel, Shal-related subfamily, member 3 (KCND3), transcript variant X1, mRNA. 6e-53 214 87.28 0.0649301623254058 0 noncoding 1 0 0 0 -0.319363968862137 0.0495706353210258 0.0430410306320031 0.472191043656016 CGTGGCCAATAGGGCAGCAGCTGGAATTCCAGTGTAAAGCCTGTCAGTGGGGCAGAGACCATCTTTCAGCAGCTGCTGTAGTTTTGTTAGCTCTCTGACTGTTGACAAAGAATCAGTTGCTGTCATTTGATATTGAATAGTTTTCAGGGTTAATTTTCTTCTGCTCGTCTCTCATATTTTTTTTAAAGTTTTGAGTCATTGTATGGGCATTATTAGACCCTTGGCATTCCCAGTGAGGGTGCTGAGGTCCCAGGAGTTCTGCTTCCATTCCAAGGACAGCTCTGCTGTGCTGTGCCTGTCACTTTCGGCGCTCTTCCTACCGCCCCCGAGTCCCCTGTGTTCAAGGTCAGATGCTTGAGAAAGAACGTGATCAAACAGCCAAGAGGAACTTAGAGGTCAGAGCTCTCTGTTCTCCTCTGGCTTGGATCCACCTCCCCCCTGGGACCTTAAGTTTGGCGGGCCTCAGAATTACCAAAGACGTGAAGCAAACCGGCCTTGGCCTTCTCCTCATCAGAAGAGTCCTCTTTGCTCCGGTTCCTGCACCCTCCAGCTTTCTCTAGCAATCTGAAGTTCAATGACTAAACCACAACGTAATTAATGATGGTAGTAAGTAGCATGGAATACCTCCAGTGTTGGGGGCATGCTCGAGCTATATTAGATACTCTCCTGTTTACTCCTCAGGGAAACCTATGAAGATTATTATGCTAATTTATTGGTGAAGTGGCTGAGGTTCTGTGAGGTTCAGCTGCTTGTCTAAGATCATTCATCGATTAGAGTCCAGATTTGATTCCAGACTTTGAAGTGTGTTCCCTGCAGGACACTGTGAGAATGGTCACCTTCCTCAGGGATTGCAGGACAAGTACTCACACCCGGCATATGGAATCCATTAAGATAACTGTGTTCCATCCAGGCTGTGCCATCACGTGGATGTGTGGCAGGGAAACTCTCCTAACCTTTAGAACACCAGCGTTCTCCTCTACAAGGGTCCTGCCAGGGAAATGCAGACCCTTGCTCCTTCAATATTCAGCGACGTGGTCTCCTCGTCAGTAAAGACTGTTTTACTAATAGCATTAAAAGGTGCTGTCAATAACATAGTAGTAAGGAGTAGAGACAGACTCCCACGGCACCCCCACCCATGTGTCACACCAGCTCAAGATGTTCTGTCATCTCAGAGGAGGCAAAACGGCTGCAACCGTGCAAAATATGATAAACCACGAAACAAAATAGGACATGACATCTGCTCCTTAAAGAGTGAAACCTGAGCTGCAGCTTTATGGGTCTGGCAAACATGCTGTGTGTGTGGGTACCATTCTGAACACTGAAGATGAAGATAAACTATGTGGACTGGCTCCTGCAGTAGATGATTCCTTTCCCGTCTCAGTGTGTCTCCATCAGGGAGTAGAAGTGGGCATGGGTGTGGCAGGACTCCTGTCCCTAAGCATTGGTGACCCCTCTCCTGCAGTGACTGGCTGAAGGCAGATCCCCAAAAGCCCCAGGGGTTTGCTGGTTCCCTGAGCCCACTGAGGGAGCACCTGCTGACCAAGAGTGGACAAGAAATTTCATCCTAAATATTGTAGCTCAGTCTCAAATTGAAGTTCCACTGGGATTGTTAGGAAAAATGGAAATAAATTCTCAATCAGAGGGATGAAAAGAATTGGTTTTGGTCAGAGAAGATTTGTTGATGTTTCTAAATGCCAGCAAACATGTGGCCAAAACATCCAAAAAGGACTCCGAGATTCCGTGATTCTGATGTGGTTTTTAGAAGAATTTCAAACTAAGTCATTTTGTTAGCTGACCCTGAGTACCAGTTCTTTAAGGAAAAGGAAAAGGGACACATATTTTGGCAACATTCCTCCCATGGCTGAGCCTGAGCCTCTGGGAAGGTGGGAAGGTTTCAATGAATTTTGTGGGCTCTTTTGCAAAGCCAAAACCTGACAGAGGTGGCGATTGTGAGTTCCTTTCTGAACAGCAATTGAAACCGAAAGAGCAGAAAGTTCAGTTTGGAACACAGGCTGTTCTAGTTGATTTTGTTCTCGGGGAGCTGCTATTTCCATCCACCCGACTGAGCTTTTTAAATGTGGACAATAGAGAAGTGATCCAGCTGGGAGGGTGGGGAGAGGAGCCCCAGGAGGTGACAACAGTGTACCCGTTGTTCAGCAGACACACCAGCACAACCGGGGACATGAGGGGTGTCGGCCGGGTTCTCAGGCTGATGAGGGCTCTGCTTCGCTTCCGTCCTGGCTGCTCCCTGTGAGGAAAGCTGTGGCTCCTCCTTGTCACCAGGGACTTGACAAGAACGAGGTGTTCCATGTTCCCGAGGAAAGAGTTCATGAACCTGAGGTTCCTTAGCAAGTAACGAGAGTTAGCATGCTGAGAGTGTCAGGCTTGTTGATTGTCTTTTCCGTGACTGTGTAAATGGTACTTTTTTCTTTTCTTTGAAAACTGGAGGTTTAAAGGGCCAGTTTTATTCATGGAAGGCTTCCTTGGTGGCTCAGATGGTAAAGAATCCTCCTGAAATGCAGGAGACCCGGGTTCAGTCCGTGGGTTGGGAAGGTCCCCTGGAGAAGGAAATGGCAATCCACTCTGGTATTCTTGCCTCGAGAATCCTATGGACAGAGGAGACTGGTGGGCTATAGTCCATGGGGTCAC EMBV3_08767 CCCTCTTTCCTGGCAATGATGTAGACGACCAGCTGAAGAGGATCTTCCGACTCCTGGGCA Gene GeneID:281066|CDK5:NM_174017:556_cdna Constitutive 2 NULL GeneID:281066 4 GENE CDK5 MGC140720 cyclin-dependent kinase 5 EMBV3_15941 AAGTGGAGTTGCATATCTGATTCTGAAGTCTTCTTGATTTGCTGTTTCTGGAGCTACTAG Gene BVV0101_005944 + 1 EMBV3_30222 GK000015.2:36251372-36515355 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30168 GGAAGGCTGGGAACCAGATGACGACCCTATGCAAAAGAAACCAACAATAAGCAGAAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33083 CTGTGGCATGATTTGTAGTACTCATTAATTGGGAACAAATTCCCATCAGGAACAAAATGG Gene BVT0102_044201 + 1 EMBV3_10644 GK000030.2:58224953-58269721 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08284 TTTGGAGAGCCTAGGAAGCTCATCACAGAAGATCTGGTGCGGGAAGAGTACCTGGAGTAC Gene GeneID:786803|LOC786803:XM_002683869:1_cdna Constitutive 0 NULL GeneID:786803 X GENE LOC786803 NULL similar to Melanoma antigen family B, 4 EMBV3_10243 ATGAGGCCACCTAATGAGAGGGTACCGGCAGGAGAAGAGGAAAGGCCCGTTAGCATTTAT Gene GeneID:514085|E2F6:NM_001076848:123_cdna UTR3_Alt 2 NULL GeneID:514085 11 GENE E2F6 NULL E2F transcription factor 6 EMBV3_22427 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42815 ATGTGAATTGGTGGTCAACAGCCCAGAGCCTTGTCATTGTTCTTTCTGGGATCCTGCAGC Gene GeneID:533277|TMED6:NM_001075988:342_cdna Constitutive 0 NULL GeneID:533277 18 GENE TMED6 MGC142375 transmembrane emp24 protein transport domain containing 6 EMBV3_23970 AATTTTAATATATTTCATTTTAGTAAGCTATTGGTAAAATAGTTTTTGACCTTGAAAATT Gene GeneID:513587|LOC513587:XM_002696253:19_cdna Constitutive 2 NULL GeneID:513587 20 GENE LOC513587 NULL similar to UPF0474 protein C5orf41 EMBV3_11037 CTTACACAGCGATGACAGTGACTCCTAAACCTGGGCGCCTGCGTGCCGACTACCTTTGAA Gene GeneID:506612|DTNBP1:NM_001045947:53_cdna Constitutive 0 NULL GeneID:506612 23 GENE DTNBP1 MGC138010 dystrobrevin binding protein 1 EMBV3_41767 AAGGGGCTGGTATACGCCAGCAACTTCCAGGTGCTAGTATATGACTTATTGCTGGGAAAA Variant GeneID:616714|NSUN5:NM_001102303:305_cdna 119^241 1 EMBV3_20162 GeneID:616714 25 GENE NSUN5 MGC152614 NSUN5C NOP2/Sun domain family, member 5 EMBV3_26964 CATATGTCCAATTCCTTCCAATAGTTGCTTAAACAATGATTAAGTTAGCCAACCCTCAGT Gene GeneID:512361|LAPTM5:NM_001046118:103_cdna Constitutive 2 NULL GeneID:512361 2 GENE LAPTM5 HA1520 MGC128686 lysosomal protein transmembrane 5 EMBV3_38871 TACAGCCGGCAGCCTTAAAAAGGGAGCGGAGGCAGGGGCGCAGAATTAGTGTTCAAAATT Gene GeneID:369020|RETN:NM_183362:291_cdna Constitutive 0 NULL GeneID:369020 7 GENE RETN RSTN resistin EMBV3_00882 GGTAATGTATCTTACAGTTGTGCTTCTGGGTGGTGGTCCCCTGGCTGGTATCCTTTATTC Gene GeneID:789504|LOC789504:XM_002688707:83_cdna Constitutive 0 NULL GeneID:789504 7 GENE LOC789504 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_09848 CCCCAAAGTCCTCAAGTCACAAAGTAAAGGGTACAAGCAATGGAGTATTGGTCACAGGGA Gene GeneID:539519|MLLT11:NM_001076169:142_cdna Constitutive 1 NULL GeneID:539519 3 GENE MLLT11 MGC140745 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 EMBV3_03876 AAAATGGAGTGGCCGCCTTCCACGCCTTCCTGAAGACAGAAGTGCCCTTAGAGCTCAGGA Gene GeneID:100297414|LOC100297414:XM_002696681:334_cdna Constitutive 0 NULL GeneID:100297414 21 GENE LOC100297414 NULL similar to regulator of G-protein signaling 5 EMBV3_02885 CCTGCTCCAACCCCTCAAAATGAAGAAATCCGTGCAGTTGGCAGGCTAAAAAGAGAACGC Gene GeneID:506291|MFF:NM_001034267:61_cdna Constitutive 0 NULL GeneID:506291 2 GENE MFF C2H2orf33 C2orf33 MGC127725 mitochondrial fission factor EMBV3_05648 CCCTCGGGAGGGCATCTGGGCTGCTCCCCCACCCACTTTTGTAATTTATTTATTTATAAA Gene GeneID:505682|ANKRD13D:NM_001101857:512_cdna Constitutive 0 NULL GeneID:505682 29 GENE ANKRD13D MGC166408 ankyrin repeat domain 13 family, member D EMBV3_31403 GGCCATGTCAGCACAGCGCCAAGTACAGAAGTGTTAAATGGGATTTGGTCTCTTTCTCTC Gene BVT0101_009386 + 0 NULL GK000015.2:56404336-56541737 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061920 TCONS_00061917 TCONS_00061919 TCONS_00061921 TCONS_00061918 1 XLOC_037169 NonCoding TCONS_00061919 XLOC_037169 NonCoding NonCoding - 15:56430029-56432872 - TSS46021 2447 1 TCONS_00061919_2 185 2 0.139690358902182 0.00154529883781073 1.01418377372794e-18 0.000220503831431793 0.000134589758171555 0.000297722750802504 4.90619176112313e-05 0.000125698778131742 2.94242651409902e-09 0.000315988347678347 2.00356774037193e-09 1.35917172741877e-15 2.21769279956537e-17 6.27820538720999e-05 4.22898417575436e-05 0.000270671521252216 2.95057168290087e-34 0 0 4.03559334274746e-05 3.26653513004373e-09 0.000112438615080504 0 0 0 1.98335561141627e-16 3.35340087332876e-05 7.85428663936708e-05 2.25201296058858e-15 2.53473155129484e-19 0 XR_233057.1 LOC101906866 PREDICTED: Bos taurus uncharacterized LOC101906866 (LOC101906866), 0.0 722 100.00 0.163056804250102 0 noncoding 0 0 0 0 -0.695159117387663 0.0165316270298506 -0.0250977555932061 0.615174307144727 GCAGGTGTGAACTCCCGGGGCCGGACGTCCGGAAAATGACGCACCGAGCGGGGGCGGGGGCGGCTAGAGCCGGGAAGCGCGGATTACCGCGCACCCAGAAGGGGATGGGTCCAACGTGGAGTTCGAGGCCGGACCCGCACCCAACAGTGAGTAGAGGAAGACGGAGGGGAACGGCACAGCGTTTCGGGAGAGAATGGGGGCGCGGCAAGTTCCCGGAGCAAGCCCGGACGACACTGGGCGGCCGGAGTCCTAGCGAGATCCTGCGTGAACCGGCTCGAAAGCAGGGACGCTTGCATTGCCACCCACAGAATGAACACCATGGTCGACTGTTCCGCGCACGCGCACACCGACCAGTTAGTCTATGCGCTCAAAGCCGACTGCCGGATAAGAATTCCTCACAGGTTCGATTGGACCTCCAACGCCAAGAGTTGCTCTTTTGTAGGCGAGCTTTGGGCCTGGACGCGGGGAACCCGGTCCGCCGTGCGTTAGAGAAATGTACGTGTCTGCAGCGAGTTTGCACCGGACCCAGGAGCTGGGACTGCGACTCGGAAGAGCTACTCCCTCGGCCTGGACGGCGGGGCCAGGGTCCATAGGAACCGCGTGAGCGGTGTGCTGAGCGCCCCAGCACGGGTCTTGCTAACGCCGTCAGCATCCGCACTGTTTGGGGTTCCTGGACACCTGACTTCCGGGAAAGATAACCGCACATCTCGAGGCTTTGCCCTGAAGTTTCAGTCAGGACTGGGTTAGATGGGCGGGTTCCTTTGTTTAGCTCCGTAACCTGGGCAGAACTCTCCGACTCTGGCCCCAGCCGGGTGGGCCTTTCAGCACGTGGGGTGCCTTGGCACTTCTTGCGCTTCGCCTCTGCGTCCGCCGGCCAAGGGGTCCTGGCAACCCTAGAGGCCAAGGTCGGGAGCAGGGATGCCAGACCCATCTAGAAAAACAGAGATTCCCTGGAGGGCCCCTCCATCCCAACCCCATTTGGCTCATCAAGTCCCTGGGAAATAGAGTCAATGTTTTGGGGAGGCCCGCTTGGTGAAATGGGGCTAACAAATCTATCCTATTTCACTGCCAGAGAGAAGAGTGAGGAGGAGCTGGGATCTCCCCACCAGCACGCACTGGTACATGTGTGAAAGGTTAGTGGTCATGTGGCTCCCAATGCACAGGCTGCCAGCACCCCAGCCAGTTTCCATTGCTTGTCATTCCTTCTGCACCCACACATACTAACTTAAAGACGAGAAAATTGAGGAAAAGTCTCCCTGGGGCTCCAGTGGTCCCCAAGCCCTTACAACCATGCCTGAGTACAGGAGCTCACTGGAGCCTCACACTTCCTTATTTCCAGATCTGAGGATGTGCGGGCAGGAAGAAATAACTCCAGTCTGGCTGCTGCAAGCATTTGTAAAGCTGCTTTCTCCCCACAACACACTTTCCCTGGCGCCTGCTCTGCCCCAGCCCTGGGTTGGGCCCTGGGGACACTGATGAGTCAGTCTCCTGAAGCCCCTGCCGGGCGGCAGCAGCCTCACTGCCTGTGCACGCTACCTAGCCAGGGCCTGTGGGCTGGTCTGCAGGACCTCAGTCTGGGCCCTGGCCGGCTGTGGTCGCTGCTAAATGAGTCTGTGGCCTGGACACACAGCCAGGACCTCACCTCCGATGCCCAGGTTCTTCATACCCTCAGAAAGGCTTTCTTCATGGACAGTCCACACTCATTTCAGACCTTGCAAAGGCTCCCCACTGATTTGTGAATAACAGCAGAGCTCTTTGCCAGCCCCTCTTAGCCCTGTGAGGCCTGCCTTCTTCCTCCTTGCCTCTCAACAGGCCTTCCTCATTCCATCTTAATATTGAATACCCCAGGCCATGGCTGCATCTGAAGCTTCCCTTTCTATCAAAGATGCCCACAGCTTCCTGGAACTTCCCAGCCTGGCTTTTCTGCTCCAGTTCTTCCAGGCAGACCCAAGGTGGGTCTGGGCCTCCCCCAGCACCCCAGCTCCTGCACTCACTCCCTGATTGCCTGACCCCTGCACCCACCTGTGTCTCCCCCTGAGGAAGGGCAGTGGCCATGTCAGCACAGCGCCAAGTACAGAAGTGTTAAATGGGATTTGGTCTCTTTCTCTCAAAGCTGAAACCAAAGAAAACTGTGACCACAGCTCCAAGCCTGGTGTGAGTCACCAGCTCGTTTGTCCTCTCAATGAGCACACATGCCTCTCAGCCATGAAACTTCTGAGGGGGATTCTCTGGCCCTCTGCTGGAGCTGGGGTCCTTGGAGACGACCTCACTAGCCAGAGAGTTGGCAAGGCAGGAGGGGCCCCATATGTTTGGAGCTGATTTTCCAACCAAAAGAGCTCTTGGCTCAAGAGGCCTCAGCATGGAGCGAGTGGGTCCAGGAATGTCTTAGGAAGGTCAGAAAATGGAGGTACAGCCAGTGGCAGGTGACCTGTGGATCATCTCCCCAG TCONS_00061915 TCONS_00061916 s 5' 25695 TCONS_00061915 TCONS_00061916 s 5' 27779 EMBV3_21107 GCCCAGTCTGCGGCGTGACGGGCGGCTCAGATGGTCACCATGGGCCAGTGCTACTACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21891 TGAAGCCATAGAACCCTGTGTAATGCACTGTCCTTTAACTTTCCTGCTGTGATGACTCAG Gene GeneID:618600|MGC134232:NM_001110183:2_cdna UTR3_Alt 2 NULL GeneID:618600 X GENE MGC134232 NULL hypothetical LOC618600 EMBV3_28710 GCCTTTTTGGCGTCATGTCTAAGAAATCTTTGTCCAGCTCCAGTTGTAAGACTTTCTCTT Gene BVT0102_092849 - 1 EMBV3_04999 GK000029.2:41329263-41338686 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08365 TCACCCAGGCTACGGCAAGGAGGTCGATCTATCTCCAGGCTGCTACAAGTGGATCCTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15977 GGAATCTCCTTTCCTACTTCAACTCCTAGATGGCTGAGAATGGCCCAGCCTGACTTCTTC Gene GeneID:505709|LOC505709:XR_083980:278_cdna Constitutive 0 NULL GeneID:505709 19 PSEUDO LOC505709 NULL similar to erbB-2 EMBV3_43054 GCTGAAGGAAGATGAGGGGATCGCCTACAGTCTGCCCCGCCGGCTGGACACCAGGCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32782 GAAAAGATACTGGCATTACTTCGACCAGCCCTCGCTAATGAAAGAACAGAGGATGTTTTG Gene GeneID:518005|TXNDC3:NM_001046235:57_cdna Constitutive 0 NULL GeneID:518005 4 GENE TXNDC3 MGC133838 thioredoxin domain containing 3 (spermatozoa) EMBV3_02130 ATGTGTTGCTGCCTCAGCTCTCTCTGGCAGCTGATCTAGCATCTTTGATGGATAAAACGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16193 CCACTGAAACTGATGGAAAGCAGAAGAAGGTTTATGAGGTCCTCTACCAAGGGGAAGTTG Gene GeneID:787704|LOC787704:XM_002686217:500_cdna Constitutive 0 NULL GeneID:787704 3 GENE LOC787704 NULL hypothetical LOC787704 EMBV3_43549 GCTATGTGCCCCTCCTTTTCCATAGTGAACACAAACTGCCCCATCTGTTGCGTGAATCTC Gene GeneID:506436|ZNF655:NM_001075261:101_cdna Constitutive 2 NULL GeneID:506436 25 GENE ZNF655 MGC139342 zinc finger protein 655 EMBV3_42385 CGCCCAATTATTGTGGAGAGTTTGACAATGCAGGTGCCATGATGAGTGTGGACGAAACAC Gene GeneID:282318|PPP1CC:NM_174581:18_cdna UTR3_Alt 2 NULL GeneID:282318 17 GENE PPP1CC NULL protein phosphatase 1, catalytic subunit, gamma isoform EMBV3_09104 GGCCTTCAGCCCACTGGCTGTGCTGGGAAGGAAAGCATGGTTCCTTTCTTAAAGAAATCT Gene GeneID:785849|DCAF5:XM_002691041:429_cdna Constitutive 2 NULL GeneID:785849 10 GENE DCAF5 WDR22 DDB1 and CUL4 associated factor 5 EMBV3_00095 TCCTTGCTGTTGATAGTGCTTTTGTGTAGCTAGTCCTCCCTTCCCAGGCTCTATGGGGTT Gene GeneID:327687|ATP6AP1:NM_175806:28_cdna Constitutive 1 NULL GeneID:327687 X GENE ATP6AP1 ATP6IP1 Ac45 ATPase, H+ transporting, lysosomal accessory protein 1 EMBV3_30522 CAGACATCACGGATCAAGTCCTTCAGTGGAGAGTTCCAAGCAGTTTCCGGGAGAAATCTC Gene BVT0102_261428 - 0 NULL GK000030.2:94745047-94978906 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040609 TCONS_00160888 TCONS_00252699 3 XLOC_024425 XLOC_097782 XLOC_155640 NonCoding TCONS_00252699 XLOC_155640 NonCoding NonCoding - X:94786911-94787257 - TSS189920 346 0.364161849710983 1 0 1.31075985418047e-05 3.63022040763329e-06 6.24066315579188e-05 3.4286277545785e-06 0 0 0 1.70945166558653e-05 0 0 0 0 0.000516368669147239 8.17340495434299e-06 4.72658932500232e-06 0 0 0 6.21757560307709e-06 5.54252170802776e-05 0 0 0 0 4.50550454239767e-06 0 2.31162322262777e-05 3.47007560227551e-06 0 0 XM_005200782.1 LOC101909003 PREDICTED: Bos taurus uncharacterized LOC101909003 (LOC101909003), 1e-18 96.9 76.60 0.390173410404624 0 noncoding 0 0 0 0 GAGGTCCAGGAATATCCGGGGTTGCTGAGGGCTGGTTCTGGGCCTGCCCCGGGGAGCAGTGAGGTCAGTGCCAGTCTCGCAGCCTCTGTCTGCTGGGAGATTTCTCCCGGAAACTGCTTGGAACTCTCCACTGAAGGACTTGATCCGTGATGTCTGGGTCCTGTCCAACCTGGCCCCAACAAGATGGTTATTTTGGGTCACTACCCTGACCTCTTTTCTGTCAGTCGACTCTGGATTAAAGTCCCTTCCTGATTCACCTTGCAGTGAGCTGAGCAACTTGTACTCTGTAACAGGTGATTACTTCCAGGTGCTTTGCATTATAAATGTGTTATCATGTCATAATCTT TCONS_00247694 . 5' 41866 TCONS_00247694 . 5' 41866 EMBV3_43431 TTTAAAAAGAAAAAAAAAGATGCAGGGTGATTTCTTATTATCATATGTTAGCCTGCATGG Gene GeneID:519993|LRP12:XM_002692755:92_cdna Constitutive 2 NULL GeneID:519993 14 GENE LRP12 NULL low density lipoprotein receptor-related protein 12 EMBV3_29969 CAGACCAGAGGACCAGGAGCTGGAGAGCTTGTCAGCCATCGAGGCAGAGCTGGAGAAGGT Gene GeneID:281070|CHGA:NM_181005:112_cdna Constitutive 0 NULL GeneID:281070 21 GENE CHGA MGC129132 chromogranin A (parathyroid secretory protein 1) EMBV3_12851 CTGGAGGCCCAGTGATTAAGAATCTGCTTGCCAACGTAGGGGACATGGGTTCAGTCCATA Gene BVT0102_305327 + 0 NULL GK000011.2:77881948-77953431 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028571 TCONS_00028569 TCONS_00028570 1 XLOC_015504 NonCoding TCONS_00028570 XLOC_015504 NonCoding NonCoding - 11:77900469-77912805 - TSS20018 1883 4 TCONS_00028570_4 68 0.26712692511949 3 0.847588163761654 1.47235621213619e-07 0.000824754832599883 0.000745164255505093 0.000477545296506109 0.000107497496360964 0.000144642654902921 0.000384467922676195 0.00121367997998214 3.23107038056305e-10 0 0 0 1.21882837266722e-05 5.25903331803021e-10 7.55572713270501e-05 0 0 0 1.13694365907496e-07 9.81942575683156e-08 1.16180723277664e-10 0 0 0 6.56045846841694e-12 8.19724819655624e-05 0.000167507555270975 0 0 0 XR_227129.1 LOC101902225 PREDICTED: Bos taurus uncharacterized LOC101902225 (LOC101902225), 0.0 1865 100.00 0.548592671269251 0 noncoding 1 0 1 1 -0.492759902695359 0.0149314418198613 0.0272803601314654 0.608039855119249 CCCTCAGCCTTCCTTGTGGGAGCTGGAGAAACAGCTATTGAGAGTTAAATTCTTCATTGAAGAATGCAATGAAAAGCAACGTGAAAAAGGCAAGGGTGTACCCATGTATCCCACATTCAGGGTGTGACTGTTTGCAAGCAGACGTGCCTTCAGATGGCCCACCAGGTCTGCAGAGCCTACAGAAAAATGAAAGATCACTCCATACCAGACTCAGAGACATCCCTGCCACGCGGCACACAGATTTATAACTCTGGGCAAAGGTTTCAACAAATATGATTTCTTCACTCCAAAGTCCATCTATGTGTATTGCCTGAAATACAGAGTGGTGCGTGATTGTCTGCTGGTCTCTAATCCCAGGAGCCTCGGCAGCAGAGGCAGGACAAGTTCCTATAACTCTGGAGACAGAGATGGCTCACACAGTGCTGTGTAGGGGCGTTCATGGAATTTATTGTTCTTTTTTCAAACTGACATAGTGCCTACACTGACACAGCCCAGAAAAAAGAAACTATTGTAAATGAAAGATCTAAAATTTGTCTATTGTAAATGAAAAGATCATCACCCAAAGATTTGGTGAAAACATGCTCCTTATCCAGACAGTCCACTGTAATGTTTCAATTGAAGAGTTTCACTCAGAGAAAGAGAATGGGTTCAAACAAACAAACAAAAGACGACAAGATCCAGGGGTTAGGTTTGATGGTCTTAAACACACAAGGACGAAGACAAAACTTCTGATTCCATGTTGGCGAGCTGGGTACATGAACTGGGATGTAAATTTGAATCTTTAAAGGCTATATTACACTTTCCCATCCACCTCTTCCATGAAGACAGGCAATAGGGAGGTACTTAAATTTTTTCATGTCCTATGGGTGTCACTGAGCAATTTGTTTCCTAAGCATCTCCCATGAATATGGCTGAAATAACAAGTAAAACACACCCGGGTGCCTAACTGGAAGAATGTACTTCTAACGTCCAAAGTCCATGTGACAATGTTATCTGAAAAACATTTGACATGAACCCTATGCAATGATACTGCTGCTAAGTCACTTCATTCGTGTCCGACTCTGTGTGACCCCATAGATGGAAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAACGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTTGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCGCCCATGGATTTTCCAGGCAAGAATACTGGAGTGGCACTAAACTCACTCTAATGAGCAGTCCTGTAAAAGGCATCCATTTTGGAACCCAGGCCAGATATGAGTGAAACTCAGTAATAAGTATGACAATCTGACTTTACCACAAGGTCTTACGACAGAGTCCTGGTATGGTGTTAACCTCTGGATTACCCAATCTTGGGAAGGAGCCAACTGGCCTATAGAACTCCTGAAAATGAAACACTACCCATCATAGGTTGGAAAGTATGTCTACCTAAGTAACTCTGATAAGAGGCCCTCGAAAATGGAAAACCACAAAAATGCCAACAATACTATAGTTCTTGAGAAGTTCCTTGTCTAGTGGGAAAAGGAGATAAAATAAAAAGCTTGGGACTTCCCTGGAGGCCCAGTGATTAAGAATCTGCTTGCCAACGTAGGGGACATGGGTTCAGTCCATATTCTGGGAAGATTCCGCATGTCTCAAGAGAACTAAGCTCATCTGTTACAACTACTGAAGCCTGTGTTTCTAGAGCCTGTGCTCCATAACAAGAGAGGCTACCACAAGGAGAAGCCCAGGAATCAGAAGTACAAAAAGCCTGTGTGTAGCAAGGCAGACCCAGTGTAGCCAAATAAATAAAAAAATGT TCONS_00025598 r 5' 51283 TCONS_00025598 r 5' 40622 EMBV3_37822 CCCCAAAGAGTGAAGAGGGGATAGAGGCAATTTGTGCGTTTCTGCTTAATACCTGGGACC Gene BVV0102_267854 + 0 NULL GK000001.2:146516812-146527927 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35974 GGCATCATCCAGACAATTGACTGTTTTTCCTCTGGAAGTTTGCTATCACAGGAACGGAGT Gene BVT0101_017241 - 0 NULL GK000017.2:54039854-54201716 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077282 TCONS_00077280 TCONS_00077281 TCONS_00077283 1 XLOC_047038 Coding TCONS_00077283 XLOC_047038 Coding Coding ATP6V0A2 17:54200500-54241005 = TSS57816 5656 1 TCONS_00077283_4 854 20 0.860853249061821 0.000308042900040665 0.00110789766118618 0.000150302619790796 0.000321021204148591 0.000167517523779443 4.48384454021917e-05 0.000437473800051065 0.000111726704249899 0.000616835821863405 6.65947670879914e-06 1.33412367555461e-08 1.44128431418818e-05 3.64553273581626e-05 1.89274069462078e-11 4.95796704281353e-08 0.00409316968748917 0.00105900005746341 0.00142906327109406 0.000256467705127864 0.000139155081080745 7.81296613031498e-05 0.00178382447328884 0.000798955007963398 0.00217957478992879 2.43066219565535e-13 7.53003054963597e-08 9.583718968675e-05 0.00062174370869904 0.000102074967862562 0.000408203733600961 NM_176637.2 ATP6V0A2 Bos taurus ATPase, H+ transporting, lysosomal V0 subunit a2 (ATP6V0A2), mRNA. 0.0 8002 99.98 0.78483026874116 NM_012463.3 ATP6V0A2 Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a2 (ATP6V0A2), mRNA. 0.0 3934 87.34 0.563649222065064 TCONS_00077283_4 sp|O97681|VPP2_BOVIN VPP2_BOVIN V-type proton ATPase 116 kDa subunit a isoform 2; 0.0 1762 100.00 0.998829039812646 1 coding 0 0 0 0 -0.0923965599363502 0.716482648933049 -0.0127034489730131 0.792207863827334 GGTGGCTGGACTGGGGACAGCTGCTATAGCCCGGAGCCCCATGGTTTGGAGCCGCGGCCAGGCCGCAGGAGAAGCTCGATCCCCGGGTCAGCCCGGCTGACCGTGCGGGACCGCGCAGCCCGGAGCCGCCGGCGCCCGTCGGGTCCCGCCGGGGGGCGCGGGCCGGTCCGCCATGGGGTCCCTGTTCCGGAGCGAGACCATGTGCCTGGCGCAACTCTTCCTGCAGTCCGGCACGGCCTACGAGTGCCTCAGCGTCCTGGGCGAGAAGGGCCTGGTCGAGTTCCGAGACCTCAACCAGAATGTAAGTTCTTTCCAAAGAAAATTTGTTGGTGAGGTGAAGCGATGTGAAGAACTGGAGCGAATATTGGCATACTTGGTGCAGGAAATCAATAGAGCGGATATTCCCCTCCCTGAGGGGGACACCAGTCCTCCGGCACCACCTCTGAAACAAGTGCTGGAAATGCAGGAGCAGTTGCAGAAGCTGGAGGTTGAGCTGAGAGAGGTCACTAAGAATAAGGAGAAGCTGAGGAAGAACCTGCTGGAGCTAATTGAGTACACCCACATGCTGCGAGTGACCAAGACTTTCGTCAAGCGCAATGTGGAGTTCGAACCCACTTACGAAGAGTTCCCTCCCTTGGAGAACGAGTCTTTGTTGGACTACAGCTGTATGCAGAGGCTGGGAGCAAAACTGGGATTTGTATCTGGCCTAATTAACCAAGGAAAAGTTGAAGCATTTGAAAAAATGTTGTGGAGGGTCTGTAAAGGGTACACCATCGTGACCTATGCAGAGCTGGATGAGCCCCTGGAAGACCCTGAAACAGGAGAAGTCATAAAATGGTATGTCTTTTTGATATCCTTTTGGGGAGAGCAGATTGGCCACAAGGTTAAGAAGATATGTGATTGTTACCACTGCCACGTTTACCCCTACCCCAACACAGCCGAGGAGCGCAGAGAGATCCAGGAGGGACTGAATACCCGGATTCAAGATCTTTACACCGTGCTTCACAAGACCGAGGACTATTTAAGGCAAGTGCTGTGTAAAGCCGCCGAGTCGGTCTACAGCCGCGTGATCCAGGTGAAGAAGATGAAAGCCATTTACCACATGCTGAACATGTGCAGCTTCGACGTGACCAACAAGTGCCTCATCGCCGAGGTCTGGTGTCCTGAGGCTGATTTGCACGAGCTGCGAAGGGCGCTGGAGGAGGGCTCGAGAGAGAGCGGTGGTACGATCCCCTCATTCATGAACACAATCCCAACAAAAGAAACTCCCCCAACCCTGATCCGCACCAACAAATTCACCGAGGGCTTTCAGAACATTGTGGATGCCTACGGGGTCGGGAGCTACCAAGAGGTGAACCCAGCTCTCTTCACCATCATCACTTTCCCCTTTTTATTTGCCGTGATGTTTGGAGACTTTGGACATGGTTTTGTGATGTTCTTATTTGCCCTCCTGTTGGTGTTAAACGAAAATCATCCCAGACTAAATCAGTCACAAGAGATCATGCGGATGTTCTTCAATGGTCGCTATATCCTCCTGCTGATGGGGCTGTTCTCAGTGTACACGGGCCTCATCTACAACGACTGCTTTTCCAAGTCAGTCAACCTCTTCGGCTCCAGGTGGAACGTGTCTGCCATGTACAGCTCCAGTCACAGCCCAGAGGAGCAGAGGAAGATGGTGCTTTGGAATGACAGCATCGTCAGGCACCACAGCGTGTTGCAGTTGGATCCCAGTGTTCCCGGAGTGTTCCGCGGCCCTTACCCTTTCGGCATTGATCCTATTTGGAACTTAGCCACCAATCGTCTCACTTTTCTAAACTCTTTCAAAATGAAGATGTCTGTGATTTTAGGGATTACTCACATGACTTTTGGAGTCATTCTGGGAATATTTAACCACTTACATTTCAGGAAGAAGTTCAATATTTGTCTGGTTTCCATACCAGAACTGCTCTTCATGCTCTGCATCTTTGGATACCTTATATTTATGATCATCTATAAGTGGCTGGTTTATTCAGCTGAAACCTCCAGAACTGCTCCTAGCATTCTGATTGAATTTATTAGCATGTTTTTGTTCCTGGCTAGTGACACAGGTGGTCTTTACCCAGGGCAGGAGCATGTCCAGAGGCTGCTGCTGCTCATCACCGTGTTGTCAGTCCCCGTGCTTTTCTTGGGAAAACCACTCTTTCTGCTGTGGCTGCACAGGGGGCGCAGTTGTTTTGGGGTTGGCAGGAGTGGCTACACACTTGTAAGGAAAGATAGCGAGGAAGAAGTTTCTTTGCTGGGAGGCCAAGACATAGAAGAGGGGAACAACCAAATGGAAGATGGATGTAGAGAAGTGACGTGTGAAGAGTTTGATTTTGGAGAAATATTAATGACCCAAATAATTCATTCCATCGAGTACTGTCTGGGATGCATCTCTAACACTGCTTCGTACCTGAGGCTCTGGGCACTCAGTTTGGCTCACGCACAGTTGTCTGAGGTCCTGTGGGCCATGCTGATGCACGTCGGCCTCCGGGTAGACACAGCCTACGGGGTCTTGGTGCTGCTCCCAGTGATCGCTTTCTTTGCAGTATTGACGATTTTCATCCTTTTGATCATGGAAGGGCTTTCTGCATTTCTTCACGCCATCCGCCTCCACTGGGTAGAATTTCAGAACAAATTCTACGTTGGTGCAGGCACCAAATTTGTTCCTTTTTCATTCAGATTACTTTCTTCGAAGTTCAGTGATGACCTGGCGTGATCATATTGAAGTATCCAACAAGCTTTCAGATTTATGGAGAATTATCATGTTGTAGAATTCCTTATGTTAAATTGATAGGAAAAATTCCAACTTCATTAATTGCCTTATGAGACAGCCAAATCTGTAAGATATACCTCTTCCTCATATGTTAAGTATTTTGTAAACTTTCTCAATTTCAGATATATAAATTTCTTTCCATTTTTATGATGAGCAAATGTAAGTTCATGCAAAAGTTATGGTTGTTTTTAAAAATACAGGCGTGGGAGAGAGAAGCCAATTTTGAATGGTGAATTGAACATAGTCTTAGATATTTGATTCCTTTTCATTTTATTAAAAAAAAAAAATCCAGAGTTATTCTGTCACCTGAAGTTGTCAGATAATATTTTCCAACAGCTGAAGCTAAGTAGTTTTAAAAAATTTAATGATGGATAATCAGAAGATTCACATTTATTATATTTTGCTTAATTAAAAGTATGCAAACTTTTTCATTGTATGCGATCTAGAATTACAAGTAGAATTATTTGTACAGTTTTGTCTTGTTTTAATAATTGGAGAAAATGGGATAAAATAACATGCAACACAATGGTTATCCCACTTGTATATTTTTTTAAAGACTTTTATCCTGTTATTCTTACATAAAACCAATTATGATAATTGTATATTTGAGAAGATAAACTGTGTACTGAGCCTTAAAATCCAGTGTGACTTTAGAAGACATAATATGGATATGATTTGAATTTAGTTGGCTGATGTTCCTGAACCAAAAAGGGTTTATACTGAGTGAAGAAGGAAAGGTAAAAAGTAGTATTTTGTATATTTTTATAATAAAATATAAATTAAGATATTTTACCATGAAGAGGTTGCACCTGTCCTTGAGAACAGTATAATTATGATGTTCCACTTTCAGACTAATTCTAAATAAATGTCTGATAAAGGCACTTAGAGTTAAACTTTTTAAAACTACTAAGATCAGTTGAAAACCAATTCTTACTAAGCCATTGTGTATAATCTTCAGTTTAAATTCATCTTTTCACTTGACATTTGAGTCAGTCCAGTTGAACATTTTGATCTGTCCTGTATTTTTATGTTATGTTCATTTTTCATATTTTACTGTAACGGGTTTTAGATATTTATTTTCAAAAAGAAACCTGCGGTGTTTTCCCTTTCTTAACATTTTGAGTAATTCACATGAAGAGACCTGCTTATCTCCTTCACCCTCACTGCTAGGAGAGAGTTTGGGACTTTCATTACAAGCTAAGATCATGGTGGCCCTGAATTTAAGTGTTATCTCTTCAGGTGATTTCAAGGCCTGTTTGCTGAGGGGCATGAACCGAACATCATGACGTAACTGTGACTCTAACATTAAACCTTTTTAATTGTAGTCAAGATGCCATGCTACTCCTCCATGAGATGTTGTCCCTTATCTTAAAATATCAAACAAAATGATGCTGATAAAACTTAAAAATGATTCTTCTCTCAATGTTAAGTTTCCCCAGAAAGATATAAGGTTGGATACTTCTGGTGGATGAATACAAAATGTGGTTAATGCCTTGCAGGCTCAGACTTGTCCCTCACAGGTTCTTATTTTTATTATTTTACTCCAGGGGTTTATTGTAATAAGATAACTAATTCGTTTTTAGGAAACCAACAATTTCAGGGCACTGTTAACTGACTAGTAAACAGGAAACCTACAGGATCTGCCAGAATTCTTTTCCACCCCCCACTGGCAGTTGTCAGGGGGACCCCTTTACCTTTATCAGGGCATAGAACAGAGTGAAGAGTCACTTTTCGGTTGAAACCTATGTAGTAGTTCTGTAGAATGTAATGGTATTATTAAACACAAATTGTTAGTTCTAATTTTTGTGAAAGAACTCTCAAGAATTAAGAGTTTGATGACATCTTGTAGGCTTCAGGGTACATTTTCTTTCTTTATATAGTTACTGGTTCTATCATGTTACTAGAGCTGTTGCTCTTTTGTTTGCAAGTGATTTGGTAGAAGTATTATGTATACGGTTGTTAAGATGTAACTTCGTTCCTGTGATAGCAAACTTCCAGAGGAAAAACAGTCAATTGTCTGGATGATGCCAAGTATCTGTTTATTTCGCTAACTCGAAATGTCACTACTGCCACATTCTCCACTTTCCATTCAGCTGTTCATTGTGAAATAAAAATCCAAGGGATTTCTTCAGTAAAATAGAGGTTGATTTTGCCCTGCAAGGATGAAGAGGGTCCTTGCAGTGGTGTGATTGTGCTGAATCAAGAAGTGCAAAGAGGGTTTGTTGGAGGTCATGCTGAGCCTTGGACTGGCCATTCATCATGAGTAAGACTTTGAGGGGACTCACCTTTCACTGAAAACTCCTCAGTCCTCATTTATGGAATGAGTATTTTATAACAACACTCTGATCTCAGTTTTCATTCTGCAGTAGTTTAATAAGGCATAGATTGTGTATAGCATTAAGTAACTTTTATGTCTACGAATTAAAAATTCAGACACTTTAGGGCCTAATTCATTTTGGACAAGAAATAACAACATCAGCTGTTCCTCAGCCTGCATTTACAAACAACCTTATTAAATTTAAAGCCAGGTTTGCTTGCATGCCATCTGGTGTATCTTCAGCAGGAAATCTTAGTTCAAGATGATGAAAATAAGACAGTTTGGAGTGAAAATTTTTCAACACCCAGGCTGAACTTTGGTTTAGAATTTTAATACTTAGAACATTCCACTTGTTCCTTGATGGGAAAATCCAGTAAGAAGGCTGGATTCAGCCCGATTCTGAATCTAGGGGCTCAATTCTGTGAGGGGAAAGGACTGAACAAGTTATAAGATCCACAAATGCATGAAAGGACACATTTCCATCTTCCTGTCAGTATTCAGCTTCCCTTTACTAATGAAAAATAAATGTATCTATTTTTGAGACA EMBV3_39898 ACATTGTAGCATCCAAGGACATAACCAGATTATCCATAGGCCTGATCCGGCTGGTGCCAG Gene BVT0102_149217 + 0 NULL GK000017.2:45571819-45573969 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075325 TCONS_00075323 TCONS_00075329 TCONS_00075324 TCONS_00075327 1 XLOC_046549 Coding TCONS_00075327 XLOC_046549 Coding Coding POLE 17:45511663-45573711 j TSS56829 9666 1 TCONS_00075327_15 1931 48 0.844988476477509 3.68639646524948e-23 4.20095623886105e-12 2.78385287328346e-26 4.73631190580267e-22 7.07051314214953e-87 1.36304144954936e-56 3.8305976465664e-36 3.33326358937924e-30 1.33295526407245e-29 1.57783015111824e-47 4.92590056219713e-22 3.00165681916018e-20 1.00597802520089e-15 3.49451263498354e-12 1.81939199820977e-21 4.89001051370613e-05 0.00146688752035096 0.000926894588140855 7.14752977588244e-31 7.35847891713363e-83 8.74579519244057e-51 0.000250595606395597 3.27857771935238e-05 6.72152423532215e-05 2.09073708114317e-39 7.23986124900338e-16 3.51927636729077e-34 1.10341043144982e-52 1.85234471639311e-54 1.45847393851741e-05 XM_005217685.1 DNA directed PREDICTED: Bos taurus polymerase (DNA directed), epsilon, catalytic 0.0 1.325e+04 100.00 0.759879991723567 XM_005266168.1 DNA directed PREDICTED: Homo sapiens polymerase (DNA directed), epsilon, 0.0 7580 88.19 0.617111524932754 TCONS_00075327_15 sp|Q07864|DPOE1_HUMAN DPOE1_HUMAN DNA polymerase epsilon catalytic subunit A; 0.0 3698 91.40 0.999482133609529 0 coding 0 1 1 1 -0.00899909543962851 0.951621908840005 0.0165920252774877 0.787184547362914 ATGGTTCTGAGGAATACCGGGCGACTGCGCGCGGAGCCGGGCGCGGACGGGGAGCCCAGCCGGGATGATGGCTCCTCTTCCTCTGTCTCGGCACTCAAGCGCCTGGAGCGCAGTCAGTGGACAGATAAGATGGATCTGCGGTTTGGTTTTGAGAGACTCAAGGAGCCTGGTGAGAAGACAGGCTGGCTCATCAACATGCACCCTACTGAGATTTTAGATGAAGATAAACGCTTAGTTAGTGCTGTGGATTACTACTTTATTCAAGACGATGGGAGCAGATTTAAGGTGGCCTTGCCCTACAAGCCATATTTCTACATTGCGACCAGAAAGGGTTGTGAGCGAGAAGTTTCATCTTTTCTTTCTAAGAAGTTTCAGGGTAAAATTGCCAAAGTAGAGACTGTCCCTAAGGAGGATCTGGACTTGCCAAATCACTTGGTTGGTTTGAAACGAAATTACATTAAGCTGTCCTTCAACACTGTGGAGGACCTCGTCAAAGTGAGGAAGGAGATCTCCCCAGCTGTGAAGAAAAACCGGGACCAGAGTCATACCAGTGATGCCTACACAACTATGCTCTCCAGTGTTCTGCAAGGGGGCAGTGTAATTTTTGATGAAGAGGAAACCTCTAAGAAGATTGCCGACCAGTTGGACAACATTGTGGACATGCGAGAGTATGATGTACCTTACCACATCCGTCTCTCCATCGACCTGAAGATCCACGTGGCTCACTGGTACAATGTCCGGTACCGAGGAAGCGCCTTTCCAGTGGAAATTGCCCGCCGTGATGACCTCGTTGAACGACCAGACCCCGTGGTTTTAGCATTTGACATTGAGACAACCAAACTGCCCCTCAAGTTTCCAGATGCTGAGACCGACCAGATTATGATGATTTCCTATATGATTGATGGTCAGGTGAGTGGGTGCCTTCTGGAGTGTGAGCTCTCTGTGAACCGGGACCAAGTCTGGTCTCCAACCTGAACAGTGTCCACTCGTGGTTAGTATTTGTTTGGTGACTAATGAGAGAATGGAGTCCACACAAGTGAACAAGCAATCTATTCTGGCATCTAGCCACTCTGTGCCCTCCGGGCAAGTCTTAGGATGAAGTAGCCTGTCTTTTTTGGGAAAGCCATGGTGTTTCAAGTTGCTGCAAAGGTTTTGTAGCAAAAATCTCCAGGCTGCATGTGGGAGGTGTGTCTTAGGCTTTGTTTCTGTAACTCACACTGACTGCTAATGAACTTCCCAGGGCTACCTCATCACCAACAGGGAGATTGTCTCAGAAGATATAGAAGATTTCGAATTTACCCCCAAGCCAGAATATGAAGGACCCTTCTGTGTCTTCAATGAGCCCGATGAGGTTCATCTAATCCAAAGATGGTTTGAACACATCCAGGAGGCCAAACCCACCATCATGGTCACCTATAATGGGGACTTTTTTGACTGGCCATTTGTGGAGGCCAGAGCAGCGGTCCATGGACTGAGCATGTACCAGGAGATAGGGTTCCAGAAGGACAGCCAGGGGGAGTACAAATCACCCCAGTGTATCCACATGGACTGTCTCAGGTGGGTGAAAAGGGACAGTTACCTGCCCGTGGGCAGCCACAACCTCAAGGCGGCGGCCAAAGCCAAGCTGGGCTACGACCCAGTGGAACTGGACCCTGAAGACATGTGCCGGATGGCCACTGAGCAGCCCCAGACTCTGGCGACCTACTCGGTGTCGGATGCAGTGGCCACATACTACCTGTACATGAAGTATGTCCACCCGTTTATATTCGCCCTGTGTACCATCATCCCCATGGAGCCCGATGAGGTGCTGCGGAAAGGTTCTGGGACGCTGTGCGAGGCCTTGCTAATGGTGCAGGCCTTCCATGCCAACATCATCTTCCCCAACAAGCAGGAGCAGGAGTTCAACAAGCTGACAGATGACGGCCACGTGCTGGATGCTGAGACCTACGTGGGTGGCCACGTAGAAGCCCTGGAGTCCGGCGTGTTCCGCAGTGACATCCCCTGCCGGTTCCGGATGAATCCTGCTGCCTTTGACTTCCTGCTGCAGCGGGTGGAGAAAACCATGCGTCATGCCATCGAGGAAGAGGAGAAGGTGCCCATGGAGCAGGTCATCAACTTCCAAGAGGTGTGTGATCAGATTAAGACCAAGCTCACCTCCCTGAAAGATGTTCCTAACCGAATTGAGTGTCCCCTCATCTACCACCTGGACGTGGGGGCCATGTACCCCAACATCATCTTGACGAACCGCCTGCAGCCCTCTGCCATGGTGGATGAGGCCACCTGCGCAGCCTGTGACTTCAACAAGCCTGGAGCGAACTGCCAGAGGAAGATGGCCTGGCAGTGGAGGGGAGAGTTCATGCCAGCCAGTCGCAGTGAGTATCATCGGATCCAGCACCAACTGGAGTCAGAGAAGTTCCCTCCCTTGACCCCCGAGGGCCCAGCCCGGGCCTTTCACGAGCTGTCCCGTGAGGAGCAGGCTAAATATGAGAAGCGGAGGCTGGCAGATTACTGCCGGAAGGCATACAAGAAAATCCACGTGACCAAGGTGGAAGAGCGTCTCACCACCATCTGCCAGCGGGAGAACTCCTTCTATGTGGACACTGTACGTGCTTTTCGGGACAGGCGCTATGAGTTCAAAGGTCTCCACAAGGTGTGGAAAAAGAAGCTCTCCGCAGCCGTGGAGGTGGGGGACGCGGCGGAGGTGAAGCGCTGCAGGAACATGGAGGTCCTGTACGACTCCCTGCAGCTGGCGCACAAGTGCATCCTCAACTCCTTCTATGGCTACGTCATGCGCAAGGGGGCCCGCTGGTACTCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAGGCACGGGAGCTGATCGAGCAAATCGGGAGGCCCTTAGAGCTGGACACAGATGGAATATGGTGTGTCCTGCCCAACAGCTTCCCCGAAAACTTTGTCATCAAGACCACCAATGTGAAAAAGCCCAAGGTGACCATCTCTTACCCTGGGGCTATGTTAAACATCATGGTCAAGGAAGGCTTCACCAATGATCAGTACCAGGAGCTGGCTGAGCCTTCTTCACTAACCTATGTCACTCGCTCAGAGAACAGCATCTTTTTCGAGGTTGATGGGCCCTACCTTGCCATGATCCTTCCAGCCTCCAAGGAAGAAGGCAAGAAACTGAAGAAGAGGTATGCCGTGTTCAATGAGGATGGTTCCCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGTGGGGAGCTGCAGCTGATTAAAATCTTCCAGTCCTCAGTGTTTGAGGCCTTTCTTAAGGGCAGCACCCTAGAAGAAGTGTATGGCTCTGTCGCCAAGGTGGCTGATTACTGGCTGGACGTACTATACAGCAAGGCAGCTAACATGCCTGATTCCGAACTGTTCGAGCTGATCTCCGAGAACCGTTCCATGTCTCGGAAGCTGGAAGATTATGGGGAGCAGAAGTCGACATCCATCAGCACGGCCAAGCGCCTGGCTGAGTTCCTGGGAGATCAGATGGTGAAGGATGCAGGGCTGAGCTGCCGCTACATCATCTCCCGGAAGCCTGAGGGGTCTCCAGTCACAGAGAGAGCCATTCCACTGGCCATTTTCCAGGCAGAGCCCACCGTGAGGAAGCACTTTCTCCGAAAATGGCTAAAGAGTTCTTCCCTTCAGGACTTTGATATTCGGACAATTCTGGATTGGGACTACTACATTGAGCGGCTGGGGAGTGCCATACAGAAGATCATCACGATCCCTGCGGCCCTGCAGCAGGTGAAGAACCCAGTACCGCGTGTCAAACACCCTGACTGGCTGCACAAAAAACTGTTAGAGAAAAATGACGTCTACAAGCAGAAGAAGATCAGTGAGCTCTTCGTCCTTGAGGGCAAGAGACAGGTGGGCATGGCCCAAGCTTCAGAAGGTTCCCAAAGCCTTGGCTCCCCCGACATGGAGGACTTTGGCCTCACAAAGCCACCTCACTCGGCAGTGCCCATTGCTACCAAGAGAAAGCGTATCCACTGTGAGAGGCAAGAGGGATCGCAGGACCTGGAGCTGACGATGCCCTGGCAGGAGGTTTTGGGGCAGCCTCCGGCACTCGGAACCACCCAGGAAGAGTGGCTGGTCTGGCTCCAATTCCACAAGAAGAAGTGGCAGCTGCAGGCTCAACAGCGCCTTGCTCACAAGAAGAGGCGGCGTCTGGAGGGGGCAGAGGGCACACCAAGGCCTGGGGCCATCCGAGAGGGGCCCTCCACAGGACTGGGGGGCTTCTTTCGAAGAACAGCTCGCAGCATTCTGGACCTTCCATGGCAGATTGTGCAGATCAGTGAGACCAGCCAGGCTGGCTTGTTCAGGGTATGGGCTGTCATCGGCAGTGACCTGCACTGCATCAAGCTGAACATTCCCCGGGTGTTCTACGTGAACCAGCGGGTGGCCAAAGCGGAGGAGGGCCCTTCCTATCGGAAGGTGAATCGAGTCCTTCCTCGCTCCAATATGGTCTACAACCTCTACGAATACTCGGTGCCAGAGGACATGTACCAAGAACATATCAACGAGATCAACACTGAGCTGGCGGCGCCAGACATCGAGGGCGTGTATGAGACTCAGGTTCCATTAGTGTTTCGGGCCCTGGTGCAGCTGGGCTGCATGTGTGTGGTCAGTAAACAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAAACCTTCACTCTTGAGCACCTGGAGATGCGTTCCTTGGCCCAGTTCAACTACCTGGAACCAGGCAGCATCCGCCACATCTACCTGTACCACCACGCACAGGGCCACAAGGCTCTCTTTGGCATCTTCGTACCCTCACAGCGCAAGGCAGCTGTGTTTGTGCTGGATACGGTGCGAAGCAACCAGATGCCCAGCCTCAGTGCCTTGTACTCAACCGAGCACAGCCTCCTGCTGGAGAAAGTGGGCCCTGAGCTTCTGCCCCCACAGAAACACGCTTTTGAAGTTCGTGCTGAAACAGACTTGAAGATCGTCTGCAGAGCCATCCAGCGCTTCCTGTTGACCTACAAAGAGGAGCGCCGTGGGCCAACTCTCATTGCTGTTCAGTCCAACTGGGACCTGAAGAGGCTGACTGGCGAGATCCCTGTCCTGGAGGAATTCCCACTGGTGCCTGTCCGCGTGGCTGACAAGATCAGCTACGGGGTCCTGGACTGGCAGCGCCACGGAGCCCGGCGCATGATCCGGCACTACCTCAACCTGGACACGTATCTGTCACAGGCCTTCGAGATGAGCAGGTACTTCCACGTCCCCGTTGGGAATCTGCCTGAGGACATCTCTACCTTTGGCTCCGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTGGCTCTCTCCTACGTCTCGCCCAGACCTGGGTGGGAAGGAGGCCGACGACAACAGGCTCGTCATGGAGTTTGATGACCAAGCCCCTGTGGAGATCAACAGTTCCGGCTGTTACTCCACAGTGTGCGTGGAACTGGATATTCAGAACCTGGCCGTCAACACCATCCTGCAGTCTCACCACGTCAATGATATGGAGGGGGCCGACAGCATTGGCATCAGCTTCGATGTGATCCAGCAGGCCTCCCTGGAGGACATGATCACAGGCAATCAGGCTGCCAGCGCCCCTGCCAGCTATGACGAGACAGCCCTCTGCTCCAACACCTTCAGGATCCTGAAGAGCATGGTGGTGGGCTGGGTGAAGGAGATCACGCAGTACCGCAACGTCTACGCCGACAACCAGGTGATGCACTTCTACCGCTGGCTCCGGTCGCCGTCCTCGCTGCTGCACGACCCTGCCCTGCACCGCACGCTGCACAGCATGATGAAGAAGCTCTTCCTTCAACTCATCGCTGAGTTCAAGCGCCTGGGGTCATCGGTCGTCTATGCCAACTTCAACCGCATCATCCTCTGCACCAAGAAGCGGCGGGTGGAGGACGCCCTGGCCTACGTGGAGTACATCACCAACAGCATCCACTCTAAAGAGATCTTCCATTCTTTGACAATTTCCTTTTCTCGATGCTGGGAATTTCTTCTCTGGATGGATCCCTCTAATTATGGTGGAATCAAAGGAACTGTTCCATCTAGGATTCACTGTGGACAGCAGGACTCCCCAGAAGAGGGCAGAGCACAGCAGGGGGAACCTGAGGAGGAGGAGGACGAGGACGAGGAGGAGGAGGAGGAGGAGGACGAGGGAGGCACACAGGAACTGGATGTCGAGGACTTGCTGGAAAACAACTGGAACATCCTGCAGTTCCTGCCCCAGGCAGCCTCCTGCCAGAGCTACTTCCTCATGATCGTTTCAGCGTACATCGTGGCCGTGTACCACAGCATGAAGGAGGAACTGAGGCGCAGCACCCCAGGGAGCACCCCCGTGAGGAGGAGGGGAGCCAGCCAGCTCTCCCAGGAGGCCCAGGGGGAGGCCGGAGCCCTTCCTGGAATGATCACCTTCTCACAAGATTATGTGGCAAATGAACTCACTCAGAACTTCTTCACCATCACTCAGAAGATTCAGAAGAAAGTCACAGGCTCTCGGAACTCTACTGAGCTCTCAGAAATGTTTCCTGTTCTCCCCGGTTCTCACCTGCTGCTCAATAACCCTGCTCTGGAGTTCATCAAATACGTGTGCAAGGTCCTGTCTCTGGACACCAACATCACAAACCAGGTGAACAAGCTAACCCGAGACCTGCTGCGCCTGGTAGACGTAGGCGAGTTCTCAGAGGAGGCCCAGTTCCGAGACCCCTGCCGTTCCTACGTGCTCCCTGAGGTCATCTGCCACAACTGTAACTTCTGCCGGGACCTGGACCTGTGCAAAGACCCCTCCTTCTCTCAGGATGGGACCGTGCTGCCTCAGTGGCTCTGCTCCAACTGTCAGGTTGCCTACGACTCATCAGTCATTGAGATGGCCCTGGTGGAAGCCCTACAGAAGAAGCTGATGGCCTTTACCCTGCAGGACCTGGTCTGCCTGAAGTGCCGGGGTGTGAAGGAGACCAACATGGCCGTGTACTGCAGCTGTGCGGGGGGCTTCTCCCTCACCATCCACACTAAGGTCTTCATGGAACAGATCGGAATCTTCCAGAACATCGCCCAGCACTATGGCATGTCATACCTCAAGGAGACCCTGGATTGGCTGCAGCTTCAGAACCCCCAAGTGGGCCATTAGCAGTCTGGGCAGTGTCCCTGTTCTCTGCTCCCATGTCCCACACCCAAGACGGGCACCCAGGAGGGCGGCCCTCGGGGAGCAGTCACACAGCCCAGAAGTGTGAACCAGTCAGAGCAAGAATTGACTTCACTTCCCGGCTCTGGGGTTCCCTGCCTCAAGCAGGGCAGCCCTCTTTAGGCCCAGGAAGCGTTTCCAGCGAGGGGGTCCCAGGGCTGGTTTCTCACTGGATGAACACACTCTGCTGCTGCTGCAGGGCCCTTCCTGCAGCCTCAGCCCTTGCTGCCCCCTCCTTTGCTGACCTGGGGTGCCCTCGGAGGTCCTCTGTTTGAGCTGAGACTCTGAAGAGGGCTGGAAGCCAGACCCAGGGCGAAGGGGCGCCTGAGCGGAGTGCGCAGCCCCGGCTTCCAGGAGTAGTGCTGTCCTACACTCTGCACTGGCAGCTTGTGGGCTGTGTGCCAGGGATCCTGGCTGAACCCACGGTCACCTGGGCGTCTCTCATACACTGAGCTCAGGGGCTTGGGCTTCTCTGACCCTCACTCAGGGTCAGAGTGAGGTCTGCTGGGCTGTTTGTGTATGGCGCAGTCACCTCGTCAACAGCAGCGAGACTGGGCTGGGGGCAGGAAGGCTGAGTAGGGGGCGGGACTCAGACTGGGGCTCAGCCACAGAGGGGCCCAGCACCTCTCCCTCTGCACCTGCTGTGAGGGGACCACCGCAGCAGGAGGCCTGGGGCCCCAGGGGGATGAAGTACACCGTTATCGCAGACTCTGACATCATATTCAGCACCTGGATTCTCAAAAAGTATTTCTTCATGTGCGACACAAGGTTCTTTGCTTCAGCTCTGAGCGGTGGGGGAAGAGGACGGAGAAAAGGGCAACAGAAATGCTATCAGGATGGAGGCCACTGTGTTCTTGCCTCAGCCTTGAGTCAGTCCGAGACCTCTGACCCCAAGGGCCTGTCCAGCCTCTGACTGCCTGAGGCAAAGAGGGTCCTTGGCCTGTGCCGCCTTTAAAAGGTGGCACCACCAGTGTGTTCAGCACCCTGTTGCTTCACAGAGATGTGGACTGTGCTGTTTTCCCCTCCAGGACGGAGCTGGCTTGGAGAGTCTGCCTGCCAGCAGCCCAGGGAACCCTCTGCTGAGCAGGAGTTGCTCCCTGTGTTCCTCCAGCAACCTCAGAACATAAGACTGCCTGCCTGCACCTCATTTTTAACTAAATGCGACTGAAAGCAGAAGAAAATCAGTCAGATTGGCAAGGCAGCAAGCACATTAAATATAAATCATAAACTCAGAAACCCAAACAGGTGGGCAGTGGAAGTCGCACTGTTGGCTCTGGAGCCTGGTTTAGATCTGTCCCTGTTACCTAATTTACACCTTGACTTCTACATTTCCTAGAGTCTTTACTGTGTGTGTGTGTGCTCGCGCCTGGGTCTCTGGAAGGAAGGAGGAAAAAAGACTTAGTAACTGACGTCTGTCCGGCTAGGTTTGTCGGCTGGGTACTGCTGTTGCCCACTGGCACGTCCAGGTCCAGTGACTGCAGGAAACTTGACTCTGCTTGGAAGGTGATGGCGCCCGGCAGCCCCCAGATGGAGATCAAATCAAATTAGGGCTGGGTGGGGGAGGAGGACTAACCAGTCTTCCTGGAAATGGAGCCAGACAAGTCCCAGGGGAGCAGCGAGGAGCTGGGGCTGTGTGGCTCACCCCCTCCCTGCAGCAGGGCAGGGGCACCACAGCTCCCAATGGTTCCCTCAGAGGCCAGCTTTGGGGCTGGGGGTATTTGGGGGTGGTGGAGGTCCCAGGGTCACTCTCATGGTGGGGGATGGGAAACCTGAGCCCCTGGCCCGAATTCTTGAGCTACAGCCCAACCCCAACTGGAAAAGCCAGTTTCTCTAAAACTAGAGCTGGAACTCTGAGCATGTGAGTGGCCCATGGAGCTGACATCACAGGCACAGGAGGATCTGCAGGGGTGAGGGGGGCTTCTTGGGGGGGTTGCTGGGTCCAGTGAGTGGTGCTGGTCCAGTCAGCAGGTGGGAAGACCAGCTCTGACCTTGGTTGTGACAGGGTCACAGGTGAAACAATCTGTGGGAGGCACTGTGCCTCCTCAGACCTGTGCACTGGTCATTGCCATTGCTGAGAAAACTGAAACCGCCATCTGGCCAAGCTGTGTCAGAGCTGCTGAGTGGAGTGAACATTGTAGCATCCAAGGACATAACCAGATTATCCATAGGCCTGATCCGGCTGGTGCCAGCTGTTCCAACCTCGCCCTGCTGCTGTGTCCGCTCCTGTTCCCCAGGACCCAATTCCTTCCCTGGCCCCCATCCCCATGTTAAATAGAGCCTCGGGTTCTGGGTGGGCATTTTGGTGTCAGCCTGAGCTTTTGTTTTCCTTGGGAACAGTTCTCATTGCCTGCCTCCTGGCTTTCTTCCTCCTCTAGACACCACCCTTTTTCCCTATCTTGAGGTTTGGGGTC EMBV3_32429 GGCGCCTGAAGAATTAGAAGCTTGGAGACCAGTTAAGGGTCTGTGAAACATTCTGGACCA Gene BVV0102_302007 + 0 NULL GK000011.2:80578394-80842560 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028588 1 XLOC_015513 NonCoding TCONS_00028588 XLOC_015513 NonCoding NonCoding - 11:80763004-80806429 - TSS20029 442 2 TCONS_00028588_2 41 5 0.989936440677966 0 0 0 0 0 0.000615059610816585 0 0 0 0 0 0 0 0 0 0.00256945261842975 0 0 1.62238296365494e-05 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0593144056406955 0.576604833514601 0.0517552076590597 0.284107456930722 TACCCTGTCATCACCAGCATGTGCATCTCAAAGCTGAATGAAGAAGATCCAGGAAAGGACCCCAAGATCACAAAGCCTGGATGCCTGAATCACCAGATTATTTTCCATTACTGGCTATACAAGATTAGTTTCCTGTGCTAGACGAGAGGGCTCCTATGCCTGGAACACAATACGTGTCTCAGAAGGCCACTCACTGCATGAATGGAAAGGAGGCTAGATGGAAGAATTTACTGTATATAGTAATGAATATAAAACACATGAAAATTGAGTGCGATTTCTGAGAAATACCTTAATTAAAGTGATTAAGCAGCAGCTCCGGACTGAAGATGAGATTCTGTAACAGTCTCCCTGCTTCTGCTGAGCATCAGATGGTCCAGAATGTTTCACAGACCCTTAACTGGTCTCCAAGCTTCTAATTCTTCAGGCGCCGCCCCCTCCGCCC TCONS_00028589 TCONS_00028590 TCONS_00028591 TCONS_00028592 s 3' 79030 TCONS_00028589 TCONS_00028590 TCONS_00028591 TCONS_00028592 s 3' 35786 EMBV3_16380 CAGGATGGACTTCCAGATGCCTGAGGAGATGAAGCAAGCACAGCAGTTCCAGAAGGAAGA Gene GeneID:517016|IL6:NM_001015617:86_cdna Constitutive 0 NULL GeneID:517016 8 GENE IL6 IFNB2 interleukin 6 (interferon, beta 2) EMBV3_25005 CTTCTGCCTCATCGTGCTGTCCCTCTCCACTTTCCATATCCACAAGCGTAGGATGAAGAA Gene GeneID:617737|LOC617737:XM_002692969:23_cdna Constitutive 0 NULL GeneID:617737 15 GENE LOC617737 NULL hypothetical LOC617737 EMBV3_10564 TCTTCCTTCTGAGATTCATCAGTGCCAACACCCTGGCTGAACTGTTCTTCAGGCCCATCA Gene GeneID:281949|NR0B1:XM_002700247:20_cdna Constitutive 0 NULL GeneID:281949 X GENE NR0B1 DAX-1 nuclear receptor subfamily 0, group B, member 1 EMBV3_19585 GTCATTTTTGACAACTTCCAGCTTAGAAACAAAGTGGGATCTGCGTGGCTCACCTGCCCC Gene GeneID:618193|TMEM162:XM_002695013:251_cdna Constitutive 0 NULL GeneID:618193 18 GENE TMEM162 NULL transmembrane protein 162 EMBV3_02810 CAGCTGAAGTGCTACAGATATTGGGGGTCATACGTTCAACCAGCTGCAGTTTTGCGACCC Gene BVV0102_212540 + 0 NULL GK000025.2:10609109-10622208 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146262 TCONS_00146263 TCONS_00146260 TCONS_00146265 TCONS_00146264 TCONS_00146266 TCONS_00146261 TCONS_00146267 1 XLOC_089061 Coding TCONS_00146261 XLOC_089061 Coding Coding GSPT1 25:10617848-10651389 j TSS109408 6883 1 TCONS_00146261_2 499 0.032253377887549 15 0.795229576624925 5.67766973819283e-10 5.5284839090719e-10 5.28701687887538e-09 3.67580426066464e-05 0.000135673604078618 2.56391360494584e-05 9.3076639490464e-05 6.50451305283144e-11 7.43423651709885e-08 7.32413333142789e-10 0.000114219421871498 4.9827014902557e-05 1.00570258981237e-05 1.03968069244104e-05 1.34993058793701e-05 0.00184152856952294 0.00118028459818965 0.00160918583114556 5.83416168022026e-18 1.36493425064934e-05 9.88596456815793e-06 0.00119982839259378 0.000110556922549194 0.00135292226292445 1.44756612918794e-09 4.03141671110867e-05 3.9286264722377e-12 0.000134637377949743 5.88980600266276e-05 4.71513201301809e-08 XM_005224517.1 GSPT1 PREDICTED: Bos taurus G1 to S phase transition 1 (GSPT1), 0.0 1.116e+04 100.00 0.898736016271974 NM_002094.3 GSPT1 Homo sapiens G1 to S phase transition 1 (GSPT1), transcript variant 0.0 4044 88.71 0.450239721051867 TCONS_00146261_2 sp|P15170|ERF3A_HUMAN ERF3A_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3A; 0.0 1017 99.20 0.997995991983968 3 coding 0 0 0 0 -1.95603743972307 0.0047236910224491 0.0127255557494081 0.796995374408805 AGGGACGCGTGGCCGTGGGGCCGGGAGGCACGTGGGCCGCTGACAGCGGCGCCGGCTGTCCTGGCACCTGTGGAATCTTCTCAAGAGGAACAGTCATTGTTGTGTGAAGGTTCAAATTCAGCTGTTAGCATGGAACTTTCAGAACCTATTGTAGAAAATGGGGAGACAGAGATGTCCCCAGAAGAATCATGGGAGCACAAAGAAGAAATAAGTGAAGCAGAGCCAGATGGTGGTTCTTTGGGAGATGGAAGGCCTGCAGAGGAAAGTGCCCAGGAAATGATGGAGGAGGAAGAGGAAATACCAAAACCTAAATCTGTGGTTGCGCCGCCAGGCGCTCCTAAGAAGGAACACGTAAATGTCGTATTCATTGGGCACGTAGATGCTGGCAAGTCAACCATTGGAGGACAAATAATGTATTTGACTGGAATGGTTGACAAAAGGACACTTGAGAAATATGAAAGAGAAGCTAAAGAAAAAAACAGAGAAACTTGGTACTTATCTTGGGCCTTAGACACAAATCAGGAAGAAAGAGACAAGGGTAAAACAGTAGAAGTGGGTCGTGCCTACTTTGAAACGGAAAAGAAGCATTTTACAATTCTAGATGCCCCTGGCCACAAGAGTTTTGTCCCAAATATGATTGGTGGTGCTTCTCAAGCTGATTTGGCTGTACTGGTAATCTCTGCCAGGAAAGGAGAGTTTGAAACTGGATTTGAGAAAGGAGGACAGACGAGAGAACATGCCATGCTGGCAAAGACGGCAGGCGTCAAACACTTGATTGTGCTCATTAATAAGATGGACGACCCAACAGTGAATTGGAGCAATGAGAGATATGAAGAATGTAAAGAGAAACTGGTGCCGTTTTTGAAAAAAGTTGGCTTTAATCCCAAAAAGGACATTCACTTCATGCCATGCTCAGGACTGACGGGAGCAAATCTTAAGGAGCAATCAGATTTCTGTCCTTGGTACATTGGATTACCATTTATTCCATATCTGGATAATTTGCCAAACTTCAATAGATCAGTTGATGGACCAATCAGGCTGCCAATTGTGGATAAGTACAAGGATATGGGCACTGTGGTCCTGGGAAAGCTGGAATCAGGATCTATTTGTAAAGGCCAGCAGCTTGTGATGATGCCAAACAAGCACAATGTGGAAGTTCTTGGAATCCTTTCTGATGATGTGGAAACCGATTCTGTAGCCCCAGGTGAAAACCTCAAAATCAGACTGAAAGGAATTGAAGAGGAGGAGATTCTTCCAGGGTTCATACTTTGTGATCCTAATAATCTTTGTCATTCTGGTCGCACATTTGATGCCCAGATAGTGATTATAGAGCACAAGTCCATCATCTGCCCAGGTTATAATGCGGTGCTGCATATCCATACCTGTATTGAAGAAGTTGAAATAACAGCCTTAATCTGCTTGGTAGACAAGAAATCAGGAGAAAAAAGTAAGACTCGACCCCGTTTTGTGAAACAGGATCAAGTGTGCATTGCCCGCTTGAGGACAGCAGGAACCATCTGCCTTGAGACCTTTAAAGACTTCCCTCAAATGGGTCGCTTTACTTTAAGAGATGAGGGTAAGACCATTGCAATTGGAAAAGTTCTGAAACTGGTTCCAGAGAAAGACTAAGCATTTTCTTGATGACCCTGCACAATACTGTGAGGAAAATTGACTGCAAAAGCCTACTTCACACCGCCTTCTCTTATTTTCTGCCCATTGACAAAACTCTCCCCATATTTTGCAAAGACAAAATTCACAGCAAAAGTCCACATTATGTCAGCTTTCTCATATTGAGAGCTCTGCTATGCCACTGTTGAATTTTTCCCAAGATTTTTTCTTCCCCTCTCAAACTCTGCTTCCTTGGACAGATTTGGCAATAGCTTTGTAAGTGATGTGGACATAATCGCCTACAATAATGAAAAACCTACCAGGAATTTTTTTATTTTTCATTTCCCCTTAGGCATACCTAGTCTTTTTCCCCCGAGGCAGATCATTCTGAGTGTGCGAGTGTGTGTGCACATGTTACAAAGACAACTACCATGTTAATAAAATATTCAATTTGAAACCCTTTTTGGTATTTGAATTGCTTTTGAATACTGTTTTTTATCTGGATGTAACATTGTTGCATTAGCTTTTTAACTGGACCAAGTAATCAAGTACATTTTATTACTTGGACTTTTCTAAACTCTTTTCCTCTCCACTACTTAAATGAGGCACTTACAAACCATGTTCAAGTTTGTATTAAAAGAAAGAATTAGATGGAACCCTTCTTTTGATGGTTAATGCATACATACAATATCTTTATGCAACTATGACACTGCTTTATTAGGTCTCTCAGTTATTTTCTGCCAACTGATATTTTAACATGGTTTCTTAAACAAAGTAAGTGGTTTTAAGACACAGGAACAGCATATCTGTAGTTTTCATAAGTATAAAGCATAATGAAATTGTACCCCTACAAAAAATTCCATTAACTTGTTAAATTAGTGGAATTTACAATAAAAACAGCATGTTGAGACCTGGCAAAAATGCCTCCTTTAGTATTTATAAGAGCTGCATGCAACTAGTATGAAAACCATATCAATTGCAAGTGCCAGTTCTACAAATTATTCAGTTTATTTATTGTTTATATCAGTAATTTTAAAGGCTGGATGACTCTTGCTGGTTAAAGCTAAATCTCATCCAGTAACTAAATGAATACATATTTAGAACCATCAGAATCTGCACAGGAAAGTTAACAAGTAGAATTATGTTTTTCTCGATTATTCAAAATTGTTTTCTTAAATATATGCTGAAATTTGCTAAATTATGATTTGGATGGCCCAGAGTGCAGCACTGTGGTGGTTTTTAGATTGAATCCTGACCTTCTGCTACAACTGTCATGATTTTGAAATTTTTAATGAGAATAAATGGGAAATGGAAGGGATACTTTCAGGGATTTTTTTCTGGGTTTATTAGAAGCCCCACTTTGATTTTGAGTGTTGCCATTTACAGAAGACTTGGCCTCTTTTAGATTGGCTTAATCTCTAAATAAGATACTTTGTAAGTGTATATCTAATGACATGTCACTTCCCTGTAATCTTCCTGCCTCAGAAAAGAAAAGCCTCCTCTATTTCCAGCCACAAACATCAAAACTAAATCTATCATGTTTTCATAACTGTAAAATTCCCATTCATTTCATGAATGACGCTACAGCTTATGGACAGAGCACAGTTACTGTCCTGCAGTTTCCTGTAACTATACTCATGGTTATTAAAGTTGCATGAAATTTAAGTTACACTATGTTTGCAAATCTGGGCTTTTAGTTTTCTGGAATATGTGGGAGCTTTAATTAATATATTATAACTTTTTATACTTCCAAGTTAATAAGAACAAAATACTAGCAACTGCTTGGATTTTAATGAATCTTTAAAAGCTCAAGAGTCACTGAAATTATTTCCAGAGATATATTTCCATTTTTAAATTGAACACATTTTTGAAAAAAAGTTATGTTTGCTATTAAAACAGTTACACTTTTAGAATATTATGTGCATGTTGCCAAGACTCAAAATGACTTGGATATCAACTGTGAAGGGCCTACCTCTAAAAAAATAAAGAGAATAAATATAATTATGAAATAAAACTTTTGATGGATTCTTGCACATTTATGCAAGTAAGATTATTTAGAAGAAACCTCATTGTTAAATTAACCAACACCATGCATTTTTGTGGGCTTTGAAGTTCTGTGGGAAGAATGCTTACTTGATGCATTTAAAAACCTTCATTACACTGCCTGGTTACTTGGATGGGCAGATGTGTCTGAAGTGAACTGGCAGTGTGGGGAGATGTCAGACCTATGAAAAGCAATATACAGATTCCTATGCTGTCATTTTGTCTTCTGCAAGTGCAAGTGTGTTTATATTGTTGACAATGCAAAAACAGGGTAACTGGCTACAGACTTAGGACAGACCTAAACATTTTTCTTTGCTGTCTTTAGCCTAGATATGTTAGAATCACAATTTTCTTTGCATCTTTTTACATTAATGATGTTCTTTATACAGCTTTCATGCTAGATTATTTAATCATAGTTTTTTAAATTAATAAACTTAAGATACTGAAATAAACATTAAATAATTGCCATTTTTCAACCTTTATTTCTTACTATGGGAGAAGGGGAAATAGGTTTCTTGTTTTTAATTTGCAAACATAATTCATCCAGTGAAAATCTATGTAAAATCAAACTAAAAGAGATGGACTGAGTATATAATGCTATGAAATTAAGTGACAAATAGTAAGGTATTCTTGAATAATTAAGCCCATGTATATTTGTTTTGAATTGAGTCTTGAAATATGTGATAATTGAATGTAAAAACTTTGTGAATTGTAGAAGAATAAGGTTATTCACTGTAACAAGAGGTAGTTCATACTTGTCTGCTAGTTACATAAACTACAAGAACTACTTTTACAAAATAGGATGGACTTTGAATGTGATGCAGTTGACAGATACTGGCATCCTCAGCTGAAGTGCTACAGATATTGGGGGTCATACGTTCAACCAGCTGCAGTTTTGCAACCCAAGAAAAAGGTGAACTTATGCTCAAAAACTGCTTTCATGATGAACTTTTGAAAAAAATCAAGAAAACTCCCTGGCAATCTTCAGAAACACTAGCTGTGACTGTAATTACTCCATGGTCTTTGATGGCTGTTCCATCTGGCAGCACTCTAGCACCTTTCCTCACTGGCGTGGACTTCTTATGGACTGCTGCTTCATGGATGACAGCTTCACTGGTTTGGGTAGGAAAGTTTTTATTACAGCTCTTAACATCAAGCAAGTTTCAGCTTTTAAAAACCCTTTGTGAAAATTCTGGTAACAGCCCTATAGCTGATTGTGGAATGATTAAATGTTCAGTGTTGGCCTGTCTTAACAGAATAAACTGTGCCATTAATCCTCTCACAGACATACATACATAAGGTAGATAGCAATCAACAGAATTTAGGGGACGATTTTCTGTCTCCAAATAACATGGCTTATATTTCCTCCAGCTGATTTTTTCCATGATTGTAGCAGATGTCATCTAATACCTTTATGATCTTGTTTCTTTCCTCTACAGATCTTGCCATGGCAGCAACTTAAGTAAATAAATGTACTTAACACGTGCACAACTCAAAGACTAGTAGGTTTAAATTTAGCAGTCAGTTGGTTATATTAGATTTCATAGTAAATGGAATAGGAAGTGTTTTTATTTCCCTGTAGTTCAGTGGTTTCCATTTGAACCAATGTACTGCCAAATTTCAGATAGGGTAAATTTGGTTCAACTTATGATGGTTTTGGCTCTAGGATATTCTTAATTTTCAATATCTTAGGACATAACTGAGTCTTCCTTCAGTAAATATACTTTTCACATACCTCTAATCCTATGCTTCCTTGAAACAGTAATGTGCTAGCTGAGTTGTTTATTAAGAAGTGTTTTAAGGGCATGAAGGTGTGGGAATATTGGAGTATTCTCCAAAATAAGGGAGAAGCAGTAAGGCACCATGTCTGATTAGGCAGAAAATTAGGCAGGATTTAAGTGACCCTCAGAATGGTGGTAGTCTTTTCTGCCTTGTCACACATGCCACTGTGCCCTTTACTATGTACCGTGGAAACCTCAGGTTTGTGGACAGCAAAGGTAGAATGACATTGTGCTTCCCAAGGCTCCCCTCTGCCAGGCACATTAGCTTAGTGCTTGTCAGCCCAAGTCCCTGCTACCTCCTTGCTTGCTGCCCAGGAAGAGTGTTTGTGCTGGAGCTGGAGCTCCTGCACACCTCAGGCGACCAGACCACCCACATGCGTTAGGTGAAACTTAGGTCTGAGCCCAGGTCTACATTTTAAGGACTTAACATTTGGCACACATCTTAGTTAACTAGTTTCTTATCTTTGTTCTAGAAGAAATGTGGATCTCTCTCAGGCCAGGATTTAGTGACTAGTTTTCACTAGATGGCAGGTTAATACCTAGTTCTCCTTTTTTAAAAGACAGAATTGAAGGGAACTGATTAGGTTTGCTGGGTTTTTAACCTAATTCAAAAGCATGGCAGAATGCTCTAGATAGGAATTATGGGAATCCAAGGTAAAGAAACCTTTTTCTTACGATTTGTAGCTACCTACTGTGCCTGACTTGGTGCCTGTGTGAGGATTAAGCCCTTAGTCTGCTCTTGCAATTATTCAAATGACTGAAGTTAAAAAAAATTTGCTTTTGTAATAACAATAAAAATTGTCATCTTCCCTTTTGAAGGATTTGTCCATTTGTTTATAATTACTGTATTCTGTCATACTCTGAGTGTATCTGCTTTCTTTACAGTTCTCAATGTCGTGTTCAGGCATCAGACGACACATAGGCACTGTATAGCTGTGTGTGCAAGGTTGACAATAGAGTATTTTTTATACTTTATGGCCCATGGAACCAGTGTCAGATACAAAAGTTGTATCAACACATCTTAAAGCAGAAAAATAGCGTTAGTACCTTGGATGTTTTAGCTTTCTAGTGGAGAATTTTATCTCCCAGTCTAGAATAAATGATGACCAAATTACGATTAGATTTTAAGTTTTCTGAATTTTAAAAGAACCAAAATTTGATGCTAACATGAAGATTTCGAAAAGTCATATACAGTCATGGCATCTTTTTGTGGTTCTTTGTATTTAGATCAGATCAGTCACTCAGTCGTGTCCTACTCTTTGCGACCCCATGAATTGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTGAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATAAGTCAACTCTTTGCATGAGGT EMBV3_20717 TCCCACACACTCGGGAGCTTTTCTAAGAGTACATTCCATCTACGCAGTACCTATGAAGGC Gene GeneID:618860|WDR48:NM_001076524:235_cdna Constitutive 2 NULL GeneID:618860 22 GENE WDR48 NULL WD repeat domain 48 EMBV3_31789 CATCCCCCCAGAGACGGACAGCTCAGACAGGAAGAACTTTTTCGGCCGGGCGTTTGAGAA Gene GeneID:507122|CDC45L:NM_001024490:37_cdna Constitutive 0 NULL GeneID:507122 17 GENE CDC45L NULL CDC45 cell division cycle 45-like (S. cerevisiae) EMBV3_17236 GCCACGAGGCACGGCCAAAACACAAAAACTAGCATACTCTTACCATATAAGCCAGTAATC Gene BVT0101_010985 + 0 NULL GK000005.2:113586141-113596983 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193562 1 XLOC_117514 NonCoding TCONS_00193562 XLOC_117514 NonCoding NonCoding - 5:113586391-113589210 - TSS144631 1076 1 TCONS_00193562_1 39 0.879182156133829 2 0.618878637331441 0.000644880266531183 0.000280161252315427 0.000103204399542269 9.26113305515078e-05 0.00062861855044378 4.98660319286399e-05 0 5.49694975541713e-06 0.000469301180549117 0 0 1.66156522472533e-05 0 0 0 0 0 0 0.000146617585167641 2.67340058975802e-05 5.36048680449467e-05 2.06895910644927e-05 0 0 0.000160977563140009 0.000314296446644779 0.000392061439039875 8.92674092183178e-06 2.70703227080061e-05 0 XM_005207439.1 LOC785804 PREDICTED: Bos taurus uncharacterized LOC785804 (LOC785804), 7e-111 405 100.00 0.20724907063197 NR_003676.2 LOC653786 Homo sapiens otoancorin pseudogene (LOC653786), non-coding RNA. 5e-62 242 75.14 0.337360594795539 0 noncoding 0 0 0 0 -0.144502659204347 0.260747476865261 0.010423150684298 0.827804189068507 GCGCTGACAGGGGGCGCTCGGGCCCAGGCTGGCGGCAGTGCCCGAGCCTGCTGACTGGCGTCCAGTGCATCACGCTCGCGAGCCGCCCCGGGCGCTGGCATCTAAGCTGCTGTGCCTTAGCACCTGGGAGCCACAATTGCTGAAGCCTGCACGGCTAGAGCCTGTGCTCTGCTGCAAGAGAAGCCGGTGCTATGAGAAGCCCATGTACCACAACGGGAGGAAAGCTCACATGCAGCAATGAAGACCCAACGGAGTCAGAAATAAATAAAGTCTGTGCGGAAAAAAAAGTCTCTAAAACAGCTCACAAATAGAGGGAGAATATTTGCAAATCCTCTATTCCATAAGGGACTTCTATCTAAGGTCTATAAAAGACTTACAACTCAATTTTTTAAAAAGCCCTGTTTGAAAATAAGCAAAGGTGACACCACCAAATGCTAATGAGAATGCGGAGCTGCAGGGACTCGCGTTGTCGGTGAGGATACAGCCGGTGTAGAAAACAGCTTGGCAGTTTCTTACGAAACTAGCATACTCTGGACTTGCCAGTGGTCAGGGGTTAAGACTTCAGTCTTTCACTTCACGGGGCTCAGATTTGATCCCTGGTTGGAAAACATTAAGATCCCACATGCCACGAGGCACGGCCAAAACACAAAAACTAGCATACTCTTACCATATAAGCCAGTAATCACACACCTTGGTATTTACCCAAATGAGTTGAAAAATTATGTCCACACAAAAACCTGCACGTGGATATTTATAACAGCTTTATTTATAGTTGTCAAAATTTGGAAGCCACCAAGAAGTCCTCCAGGAGGTGAATGAATAAATAAGCTGTGATACATTCAGACAGTGGAATATTCTGGAGCAGTAGAAAGAAATGAGCCATGAAAAGATGTGGATATTTATGGATATTTATAAACTTTAATGGATATTACTAAGTGAAAGAAGTCAATCTGAAAAGGCTACCTTTATGATTCCAGCTACATGACACACTGGAAAAAGGCAAAACTATGGCGGCAAAAGATCATTCGTTGTCAGGGACTAGGGTGGAGGGAGAGAGGAATAAGTGCAGCACAGAG TCONS_00196572 r 5' 223 TCONS_00196572 r 5' 223 EMBV3_29022 ACAGAAACTGCGAAGAAGATTTCAACTCCTCCCATCTGCCAGCAAGGCCAAGATTAGAGC Variant GeneID:618047|DNAJC15:NM_001080332:220_cdna 254^330 4 EMBV3_39088 GeneID:618047 12 GENE DNAJC15 MGC148559 DnaJ (Hsp40) homolog, subfamily C, member 15 EMBV3_05679 GGAAGTTTTCCATGCATCCAGCCACAGACGCCCGTTTGGAAACACTGCAAGCAATTTTGC Gene GeneID:511583|LOC511583:XM_002688202:67_cdna Constitutive 0 NULL GeneID:511583 6 GENE LOC511583 NULL similar to Family with sequence similarity 114, member A1 EMBV3_33640 AAGATACGCAACACATAGATTCCTGGTTTGTTGATAATACTTACAACAAACAAGCAGAAA Variant GeneID:507226|TPX2:NM_001098898:916_cdna 504^623 1 EMBV3_19559 GeneID:507226 13 GENE TPX2 MGC152526 TPX2, microtubule-associated, homolog (Xenopus laevis) EMBV3_10595 GGTTTGGTAGTGGCTACCTAGAAGGTTTGGGCACCTTCCAGAACCTCTGCATCACAGAGT Gene GeneID:614075|FAM3A:NM_001076309:73_cdna Constitutive 0 NULL GeneID:614075 X GENE FAM3A MGC143089 family with sequence similarity 3, member A EMBV3_10790 ACTGGACAGTGGGATTGGAGACCAAGATTCATCTAGTGGAAGTTAGGCACTGTTGACCAA Gene GeneID:511707|C1H3orf38:XR_082687:2_cdna Constitutive 0 NULL GeneID:511707 1 GENE C1H3orf38 ZNF654 chromosome 3 open reading frame 38 ortholog EMBV3_20577 GAGGAGATGCTGCCGGGAACATGGGACTGTGCCAGACCTCTGGACAAAGGACTGAATAAA Gene GeneID:535163|MDN1:XM_002690180:52_cdna Constitutive 0 NULL GeneID:535163 9 GENE MDN1 NULL MDN1, midasin homolog (yeast) EMBV3_11860 TCAAGATCTCTCAGAGTCATTTTCTTCTAACTTGACTGTGAAACATCTAGGTTTGCAAGA Variant GeneID:516064|LOC516064:XM_002684772:285_cdna 412^543 2 EMBV3_43368 GeneID:516064 1 GENE LOC516064 NULL similar to Uncharacterized protein C3orf17 EMBV3_42371 GAGAGCCAGGAAACCCACAGCCACGTACTGGTTGTTCCAGTGCAGTCCCCATCCCGAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35582 TCCCTTCCTCTCCCGAGTCAGAGAGCTCTAGCATGCAAGGTTACTTGGCTAGTTCCTAAT Gene BVT0102_096219 + 0 NULL GK000002.2:125970015-125975896 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103772 TCONS_00103775 TCONS_00103776 TCONS_00103779 TCONS_00103771 TCONS_00103773 TCONS_00103770 TCONS_00103774 1 XLOC_062210 Coding TCONS_00103772 XLOC_062210 Coding Coding EYA3 2:125877787-125972969 j TSS76992 5437 1 TCONS_00103772_4 527 17 0.943055861989263 0.00211085085267233 0.00203529900622902 0.00033657868639908 2.0325679662595e-08 0.00180835239197426 0.000688103834735343 0.00145379004290802 0.00422160534057739 0.00333319454045536 6.67483014238002e-08 2.91473132749205e-08 5.74980999641584e-74 0.00026083004450007 2.85673282829297e-210 0.000478768957609423 8.16190729824438e-06 7.12919432582477e-14 6.74648581144269e-07 0.00265250832402108 0.000684659445794914 0.000186485772139239 3.9527641298491e-05 8.14282031852333e-08 0.00109356089702452 0.00094822960751706 0.000996376905079176 2.50701710396337e-05 0.000448944114923078 4.37650411529306e-13 0.000351584976224283 XM_005203131.1 EYA3 PREDICTED: Bos taurus eyes absent homolog 3 (Drosophila) (EYA3), 0.0 9467 100.00 0.965238182821409 NM_001282561.1 EYA3 Homo sapiens eyes absent homolog 3 (Drosophila) (EYA3), transcript 0.0 2711 92.37 0.341916498068788 TCONS_00103772_4 sp|Q99504|EYA3_HUMAN EYA3_HUMAN Eyes absent homolog 3; 0.0 962 88.48 0.998102466793169 0 coding 1 1 1 0 -0.318359923147152 0.166048785917676 0.0416592771560118 0.601739204601982 GACACATGCGCCCGAAAGCTTCTGGTGGAACGAGGTGTGGATTGTGTGATGACCCTGACCGCCAACTTCCGGTTCCTAGGGATGCGCATCCGGGTCACACTAACGCCGCCGTTTCCTCCAGCCGCTTGGTATTCCTGTGTGTTTGGACCAGTCCCCATGTCCTACTGTGGGGCCTCTGCAGCCTTTGGATTGTGAAGACTGCTGGGGGATACTTGCAATCCAGTCACAAAAGTGTAATAAAGAAATATTGGTCCTGATGGAAGAAGAGCAAGATTTACCAGAGCAACCAGTGAAGAAAGCCAAGATGCAGGAATCAGGAGAGCAAACTTTAAGTCAAGTAAGCAACCCCGAAGTCAGTGATCAGAAACCTGAAACTTCAAGCCTTGCTTCAAACCTTACCATGTCAGAGGAAATTATGACATGCACCGATTACATCCCTCGCTCATCCAATGATTATACCTCACAAATGTATTCTGCAAAACCTTACGCACATATCCTCTCAGTTCCTGTTTCGGAAACTGCTTACCCTGGGCAGACTCAGTACCAGACTTTGCAGCAGTCTCAACCCTATGCTGTCTACCCTCAGGCAACCCAGACGTACGGACTACCTCCTTTCGCTTCAAGCACAAATGCCAGCCTGATACCCACTTCATCTGCTATAGCCAATATTCCAACAGCAGCCGTTTCCAGCATCTCAAACCAGGACTATCCCACCTATACCATCCTTGGTCAGAGTCAATACCAAGCTTGCTACCCCAGCTCCAGCTTTGGAGTCACAGGCCAGACTAACAGTGATGCTGAGAACACCACCTTAGCAGCAGCCACATACCAGACAGAGAAGCCCAGTGTCATGGTACCTGCAGCTGCAGCACCCAGACTCTCCTCTGGAGACCCTTCTCCAAGCCCATCTTTGACCCAGACCACACCAAGTAAAGATGCTGATGACCAGTCCAGGAAAAACATGACTGGCAAGAACCGGGGCAAGAGGAAAGCTGATGCCAGCTCTTCCCAGGACAGTGAATTAGAACGGGTATTTCTGTGGGACTTAGATGAAACCATCATCATCTTCCACTCCCTTCTTACTGGATCCTATGCCCAGAAGTATGGAAAGGACCCAACAGTAGTGATTGGCTCAGGTTTAACAATGGAAGAAATGATTTTTGAAGTGGCTGACACACATCTATTTTTCAATGACCTAGAGGAGTGTGACCAGGTGCATGTGGAAGATGTGGCTTCTGATGACAATGGCCAAGACTTGAGCAACTACAGTTTCTCGACAGATGGTTTCAGCGGCTCGGGAGGCAGTGGCAGCCATGGTTCGTCTGTGGGCGTCCAGGGAGGTGTGGACTGGATGAGGAAATTGGCTTTCCGTTACCGAAAAGTGAGAGAAATCTATGATAAGCATAAAAGCAACGTTGGTGGGCTCCTCAGTCCCCAGAGAAAGGAAGCACTGCAGAGACTAAGAGCAGAAATTGAAGTTTTAACAGATTCCTGGTTAGGAACTGCCTTGAAGTCTTTACTTCTCATCCAGTCCAGAAAGAATTGTGTAAATGTTCTGATCACTACAACCCAACTGGTTCCAGCTCTGGCCAAGGTTCTCCTATATGGGCTAGGAGAAATATTTCCTATTGAAAACATCTACAGTGCTACCAAAATTGGTAAGGAGAGCTGCTTCGAGAGAATTGTGTCGAGGTTTGGGAAAAAAGTCACATATGTAGTGATTGGAGATGGACGAGATGAAGAAATTGCAGCCAAACAGCACAACATGCCCTTCTGGAGGATCACAAACCACGGAGACCTGGTGTCCCTCCACCAGGCTTTGGAGCTTGATTTTCTCTAAAAACTGGAATGAAGAGCCTTCCCCATGAGCTCCTTTTCACTCCTTGAAGGGAGCCAGAGACCGGAACCAACTGGGAATTCTCTCTCTCTTTCTCCATGGAATGCTGGCGAGAACACAATCAAAACCAACAGCTGCAAGAGATGAAGCTGATTTTTGCTGTGCGTGACCTGCAGCCCCGTGTTCATCCTTGCACAGGAGCGGGAGATAGTTGGATTGAGAGAACAATAGACTCACCGCAGCTACAGTGCTTTTAATTCTTCTGGTTTTTTGTTTGTTTGTTTGTTTTATCTTGTTTCAAAAAAAATGAAGAAAAGGAAATCCTTGGGGCAGAGTTGCACTCTGCGTCCATGACCAGATTGAGAACTGCTATTAACTTGTGGTGATAGGATAAACGCAGCAGACTTTTATAACATCTCTTGCAGTCTTTGTAATCTCCTTAGCTGTAGAACATACTCCCAGTGAATGTATATGTTATTTTTATAGGTAAGGGTCTGGTCTCTCTGAAGCAGATTCCCCTCCCCCTTTCTTTTTCTAGCAAGAAAGGGGTGTGTAAAATTTCCTTGGAAAATCGTAACTGAAATATCTGAGATACCTCTCTGTGACAGTAGCACCTCCTTAGCTGCTCCAGTGGTCTGCTCTCAAGGGTGGGCTCCTTCCCACGCTTCCACCTCCTGGTTGGCTGAACTGTGGGGCCTGGGACACTGATTAATTTTAGACTTTGCTGTTTCCCATCCTAGAAGCCTTAGTCCCCTTCCCAATCCCTCTCCCTTTTTGACCAAATGGCACAATCCTAGAAACTCTTCTTAGTAAATTTTCAGCCTTCAGCTTGACTCTTTGTCAAAGCTAACGAGGGCTTACCTTCAAACTGGAGAGAAGACCTAAGGCTTCTTAGGAATTTCCACTTCTTTGGCCCTTGAAACAGGAAGATTCCAACTTTTCCTCCTGCAGGAAAGCACCCTTCCCCAACAGAGGCCATCCCCACCGGGCCTCCCCCTTCTTAGTCATCAGTGCCAGGCTAGTCCACCCTCTGCACCTCATATCTACCCCCACACAGCTCTGGCCTATCCCCAGGCTTTGGACCCAAGTAGTCAAATCAAGTCTGAGAAGAGGCTCATAACCGCATTTTGGCCAAAACTACTAAGGAATTGGACTTCATGCTCTGAATCCTTTAAGCCCTGTGAGTGGTGTTCTGGGCATGTATTTACCCAGATCTCGGCCTGAAACTGAAGACCAGATGGCTGTGATCAAAGCCCAGTTTTCCTACGGGATCCGCTTCCCACTTCTCAAGTCCCTTTCTAAAATGGGAAACTCGAAAGCCAGAAAGACTCACCTGATTTAAATGAGGTTGTAGATCCCCTACGCCATGCCTGAAAACTCAACCGTGGGCCAAATGCGGGAACATCTCCCAACCTGACCTCTGGGAAGTTGGGTGGGTGCCCAGGTACGAGTCACAGCCTTCAGTCCAGCTGTATTGGTGGATGCCCCACCCTCCACAAGCAGCCTGGGCACGTGCTCAGGCCGCATAAACTTCCTTAGAGCTCAGGAAGTTTAGCTTCTCCCAGGTTGCACGGAGAGAGGTGATTTTATAAGCACCTCAGAGAGATGCAGTCTGGGTCCTTAGCAGGCGGAGTCCTTGACCAACAACAGCCATCACTGCTTACCCTCAGAGGTTTAGCGTATCCACTTGCAGATGCTCCCAGCACAGAAGGGGCCAGATTCCCTCTAATGCCAGATCACCCAGAGAAAGGCTGGTGTACACATTCCTTCAGAACGAATTGAGAAGGTGCTTCATAACTCAGTTGTAGGTAAGAGGTGTTTGGAGAGGAGCTCAAATCAGTGCTTATCACCAAGCTGCCTCTTCGGGCTGTTTCCTTTGGATGGGGGAGGATATATAGTCTGAGGCGGACCTTCTTGGTCCGAGTTCACCATAGTTGCCCGGATGCTGCTCTGTCTTGCTTGATAATTGATCTTAGCGTGCTCTAGGGTGCACGGTCGATCTTTACTTCCAGGCCCCTCCACCCCACCCCATCCTGGCAGTAGGTCTGTTGGTTTCTTGCCCTGCTCCCAGGCCACCCGGTTGGTGCTGTGCTTCAGGCTGCTGAGACTGCAGAGCAGTCTGCGCATCATGCTCACAAGTACGCGCACGCACACACACTCATACTTTCCTCTGCTTGCCTGCTGGGAGCTCTTTATTCCTAGAGTATGACTTGGGACTCCTTTTCCGATGGCCTTTTCCCTCCTGCTCTGACTGCATAGCTTAGGTCTTTGCAAAAGGAACTTGAAACTGGCTAAGAGAGGTGAGGACGCTCCCTGGGCAGTGCCGTCTTTGCTCTTTTCTGGTTGATCAGAGGGCAGACAGGAAATGGGAGCTTCCTGGCTCCTCTTTGCCAAAATGAATCGTCCAGGGAACCCAGTGCTCTTCAGTAAACCTGCTTTCCTCCTCCATGGCACAGAGATCCGGAGAGGAAAGCAAGTGGGCAGCGCAGCAAGCTCTTGGAGGCTGAGGTCCAAAGGATACTATGGGTCCTTCTCGTTTAGGGGAAAGCCCTCTACCAAAAAGAGTCCCCACCTGATGAGTCCCTTTCCCAGCTGGGCACCATGGGTTCTATAAGATGGGTCTGCACATTTCATGGTGAGAGCTGGGCCATCTGTAGTAAGGGATCTGGAATTGTCAGCCGTGTCCTGGGTCTAAGAGGTGGTTTTCCTTTCGAATGTAAAACTGACTGTGCCTTAGCATCACCCTGTCCGGTGCCCCTGGGGCAGCAGGTGGTGGCCAGGAGAGTGGATGCCTGCTCCAGATCTAGATGCCTAGTGGGGCTTTTATTTGGTTTGGGGTATTTCTGTCTTCTGCTCTGCAACTGGGGGGAGCAAACCTAGTGTCCCAGGAGACTTTGTGCCACAGCTTGTTCGCAGTTTACACAAACTAGTTCGCGTTAAAGCTCCAAGCAGAATCTGATGGGCCAACTCCAGCTGCAGCGTATGGAGCTTCTCAATGTTCACTACCTTGAATGGGTGTCAGTGCCACTGAACCAAGAGGGAGAGGGGTTTAGGGGTGGAGCCACACACTCCCTCTCCCTGGGGGAGCGATGGCTGAAACCATGGGGTGGTGAGCTTCGGGCCTTTCTCTCCTTGCTCCTGCAGAAGCGGGCATTAGGAGCCCTCTTAAGCCAAGCTTCTGTTTCTCACCACTAAATCGGTTTCCCTTTTCATTCAAAAGTTGAAACTTCCCAAGTACTCAAGCTGTAGAAGCCAAATCGAAATTCTTAGATTTTGAAATATCTTAACCACAAGACAACATCTAATTCTGGCCCACCTCTGATCAGCAGGCCCTGTCCCTTCCTCTCCCGAGTCAGAGAGCTCTAGCATGCAAGGTTACTTGGCTAGTTCCTAATGCACTGATGGGAGCCATCCCATTAAGGACGACTTCTACTCGAAACATGACCCTCTGGACTTCAGGTGCCTCATTTATCAGGAAAAGGCATTGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTCGAGTCCTTGACCATAATGTTATATGTAATGGGAACTATCTTATAAACTTGAAAAAATAAAGTTTTTATTTTCT EMBV3_08457 TCTTCTGAGACGAGTTCTGGCAGTTCTTAGCCACACAGGGCAGCTAGGGAACCACTCCTT Gene BVV0102_082368 - 1 EMBV3_21496 GK000025.2:39279505-39292718 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145586 TCONS_00145594 TCONS_00145587 TCONS_00145591 TCONS_00145592 TCONS_00145595 TCONS_00145593 TCONS_00145590 TCONS_00145585 TCONS_00145584 1 XLOC_088872 Coding TCONS_00145592 XLOC_088872 Coding Coding RNF216 25:39230551-39281563 j TSS109070 3293 3 TCONS_00145592_3 201 5 0.935543314187136 4.8437628606141e-07 0.000752279128483808 1.9393407157087e-17 5.33611637982318e-05 0.000212244094875668 3.53770698757698e-11 0.00038151906078971 0.000302758866013714 8.80563791166565e-06 6.77669883017081e-18 2.16528231699149e-06 0.000599921344708238 4.74842958835467e-06 0.000175713712164073 4.10987408866809e-06 0.001635455860676 0.000300038454311434 0.000515474166054791 0.000216816326610085 0.000668977643247569 6.40645146171826e-05 0.00122025383745702 0.00116345709794412 0.000903427508361516 0.000320020691611531 0.000432087534470114 0.000422206132447273 1.10293117083321e-28 5.55952742861091e-05 1.96696557636006e-07 XM_005225169.1 RNF216 PREDICTED: Bos taurus ring finger protein 216 (RNF216), transcript 0.0 5865 100.00 0.987245672638931 XM_005249785.1 RNF216 PREDICTED: Homo sapiens ring finger protein 216 (RNF216), 0.0 935 89.06 0.216216216216216 TCONS_00145592_2 sp|Q9NWF9|RN216_HUMAN RN216_HUMAN E3 ubiquitin-protein ligase RNF216; 3e-115 352 94.50 0.995 0 coding 0 0 0 0 -1.20222795195848 0.00354280048471082 -0.211612926562353 0.0273685939264628 TGGCAGTGACTCTGGACACACAGAGAGGACTGGCTGGTGGCGAAACCTGTAGGAAGTGTCAAGGACTCTGGAAAGAGCACAACGGCCTCACTTGTGAGGAGCTGGCTGAAAAAGATGACATCAAGTACCGAACATCTATTGAAGAAAAAATGACTGCTGCCCGCATTAGGAAATGCCACAAGTGTGGGACCAGCCTCATCAAATCTGAAGGCTGCAACCGCATGTCCTGCCGCTGCGGTGCCCAGATGTGCTACCTCTGCCGCGTGTCCATCAATGGCTACGACCACTTCTGCCAGCACCCTCGCTCCCCAGGAGCCCCCTGCCAGGAGTGTTCCCGATGCTCTCTCTGGACCGACCCCACTGAAGATGATGAGAAGCTAATTGAGGAAATCCAGAAGGAGGCCGAAGAGGAACAGAAAAGAAAGAATGGAGAGAACACCTTCAAACGCATCGGCCCCCCCTTGGAGAAGCCCCCTGAGAAAGTGCAAAGGACCGAGGCCCTGCCGAGGCCCGTGCCCCAGAACCTGCACCAGCCGCAGATACCCGCCTACGCCTTCGTGCACCCACCCTTCCCCCTGCCGCCCGTCCGGCCCGTGTTCAACAACTTCCCCCTCAACATGGGCCCCATCCCGGCACCCTACGTGCCGCCCCTGCCCAATATGCGCGTCAACTACGAATTTGCCCCCATCCACCTGCCCCTGGAACACAACCTGCCCATGCACTTTGGCCCCCAGCCTCGGCATCGCTTCTGATGCCTGGGCCCCGCCCCTCCAGGGAGCCCCGTCGAGTGCCTGGCAGTGGAGGCTGGATGTAGATGCTCCCTCCCACCCCGGCCCAGGCCCATGGCTGTGCCAGGCCTGCCCAGTAGGGGTGGTGGACTTGGCTTGCAGAAGGGTGGGCAGAGTTTCTTCCTGGGAAGGGCCACAGCTCCTTCAAGAGCGACCAGCTGGTGGTGGTACCCTGTGGGTGCCCATGAGGATTGGTCTGGCACTCCCTGGGCAGAGATCAGGGGCAGCGAAACCATCTTCCTGAAGAGTCCTGCCATTCTAGCTTCCAGGTGGGGGCCCTGGCCACAGGGCACCCATCTGTCACTCATATCCCTGTGGGAATAGATGCAGGGAAATATTTGCCTCCATCCCCAGCCCCTGGCAGACAACAGAAGTCTCTCAGTTAAAACCATGTAAGCCTTCCTCACCACAGCAGTGTGACCCATAATAAAGTGACGTAACAGCGCAGTTTGGAGAGCCACGAGATTGGACCTGGGTCCAGCAAGCCTGGTTCTCCCATCCCCTGCTCCGAGGCCTGCCCAGCGTGAGGTGTGCCCCACCGCCCTGACCAGCTGCTCCTAGTGAGGGGGTGACTGAGTGATGTTCACAAGCCTGGGAACACCACTCGGCGGGGGGAGCTGTGGACTGTGTCCCTCAGGCCCCCACTGCCACAGGGGTTCCAGGGTCTCCCCTCTTGGCCATCGGATGAGACCACAGGGAGCCACTTCATGCAATGGGATGTTTGTGTTTTATCTGAAGAAACATTTGCTGTCCACTCAGTTTTCACTTTTCCAGTTTTCCGTGGCCTACTCAAGTTTCCCTCAATCCCTATTACCTACCGAATGCCTGGCAGCTGACGGTGGGGTTCCCGGAATCTTCGCCAAACACAGGGCCTTTCTGAGCTAGCTGTGACAGCCAGGTGGCTCTGCTTGGAGCTGTGTTTGCCACCCCAGGTTCTCCCCCAAAGGTGTGGCGGCGGCGCTGGCTGTCCCCAGGGCCAGGGGACCTGTCCTGAAGTCAGGACTCGTTTGGGAGCCCCTGCCATGCCGCGCGTGGACTTTGGCTGTCCAGCCCCAGCCAGGTGTCAGCTGCGCCCCAGCACACGCTTTGCAGCATGTCACCACACTCCATCCCGCCTGCAGAGCCGTACCCCCCTGGGGATGAACCTGCCTGGCCCCAGTGTTAGCCTCCGTTCTCTGGGTGACACTCCGATGGCTGTGGGCTCCCAGAGCTCACACACACAGACCTCAGTGCAGTGGACATGCTCCATGTCTGGGCACCCTCTGCCACCAGCCTCAGCTGTTTTTCAGAGATTAAGCTGGAGAGATGAGGCTGAGTTGTGCGTCCTTGCTCTTTTCTCCGGATCTGGGCTTGAGGGGTGCGGGTGCTTGAGGAGAGGCCACACCAGCTATCTGCTGCCAGGGGGCCCTCCCTGCCCAACCCTGCCCCTGCCCCCCGCCCCTCAGGTGCAGCTGCAGGGTTTCTCCCTGTGCCTGGAAGACACGTTCCGCCCCCCTGCTCCCCACAGGAGGGCTCTGAGAGCCAGGAGCTGCCAACAGGTGTCCCCAGGTGCTGTCTGCCTGCTCAGCTGGTGACAGTCTCAGCCCAGCCCAGCAGAACCTGCTAGGTCTCTGACCCAATTCACCATCCAGCGAGGGAGCCAGCCTCCACCATGGCCCTGTGGCCCGGGGTTCATGGCTCCACGGAGGGCCTGGGGCAGCGGCAAGGACAGAGACCTCAGGCAGGTGTGTGCCCAGCGCCGGCCCGGTGACTGCCCTAGGCCCTGCGCGTAGAGGCACCCGGCACAGGGAGACCAGAGTGATGGTCCCCTCAAGGCCAATCCCAAGGCTCGTCTTCTGAGATGAGTTCTGGCAGTTCTTAGCCACACAGGGCAGCTAGGGAACCACTCCTTCCTCTCTGAGCCCAGGGCACCCAATTTCCAGTGTTCCTCTTCCAGCCAGCGTGTGGAGTGGCTGGCAGGCCAGCGGCCACAGCGCCGTCACCAAGCGTAAGTCCCCGCGTGTCTGTGAAATGAGCCTGTGTGTCCACATGTCCTGGAGACAGCACCTGGGTCTCGGTCTCCTGGAGAAGTGGTCTGTCCTAGTGATGGGGTGGGGGGAGAGACGGGACATCCTCATCTGACAAGACAGTCAGTGGCCTCAAGACACTAACGCCGGGACACCCGCAGAGATGAGCCCCTGTCTGGGGACAGCAGTCCTGGAGGCAGCCAGCACCTTCCCCTCTGGGCTGCTGGGCTTGCTCCCCGGAGCGAAAGACTGCCCAGTGGCAGTCCTGTTCTTGCCTTAAAACTGGAGAGAGGAATCTAGTATTTGCACTTAGCAAAAAGTTTTAAAACAAGTGTGCATGACCAGTCACATTGTATAAAAACAGCAAAAATGATTAGTTTATTACATTTTTTTTTCTTTCTGGTAGTAAAAATACATAATTGTTTAAACTACTGTGTGTAAAAAGCTTGTATTATATGTAACTTGTTTTTTTTTGTAAATAGATGTTTGTGCAGACTGC EMBV3_41456 GTTTGCTATCTTATCTCCTTTTTTCCCCCTGTCTCATTTGACCTAACTTAAGCTAGAAAC Gene GeneID:786759|TRIP11:XM_002696752:398_cdna Constitutive 2 NULL GeneID:786759 21 GENE TRIP11 NULL thyroid hormone receptor interactor 11 EMBV3_05141 TTCTAAAGTTGGAAGCGGACGTTTGTGGCAACTCTCCTGGCTCATGTATCGGCAGCCCTT Gene GeneID:785222|RCBTB1:XM_002691788:404_cdna Constitutive 0 NULL GeneID:785222 12 GENE RCBTB1 NULL regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 EMBV3_03425 GCTGTGATGCTGCTCCCATCCTGAAGATTACTTGCTCAGACACAGAGTTCCTAGAGCGAT Gene GeneID:618816|LOC618816:XM_002687428:185_cdna Constitutive 0 NULL GeneID:618816 5 GENE LOC618816 NULL similar to olfactory receptor Olr879 EMBV3_22212 ATCTGCCACCCACTGCTCTATGGCCAACTGATGAGCACCCAGCTCTGTGTAAAGCTTATA Gene GeneID:515887|LOC515887:XM_002687329:156_cdna Constitutive 0 NULL GeneID:515887 5 GENE LOC515887 NULL similar to olfactory receptor MOR160-5 EMBV3_08249 TTTTTGTCCCACGAGTCCCTCCTGCTTCTACAGCAGTTGCGTCCCCAGAACTCTCTGTTA Gene GeneID:615254|LOC615254:XM_002689673:79_cdna Constitutive 0 NULL GeneID:615254 8 GENE LOC615254 NULL similar to KIAA1045 EMBV3_34452 GGCCCTCAAGTTCATCAAGAAAAGGGTGGGGACACATATCCACGCGAAGAGGGAAAGAGA Gene GeneID:510795|RPL36:XM_002684929:76_cdna Constitutive 0 NULL GeneID:510795 1 GENE RPL36 NULL ribosomal protein L36 EMBV3_31980 AGAAATTGCAAGAGACCAAGAGAGTTAGAGATATGAGCAAGGAAATTAATCTAATGCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42121 GATCACCGCCTATGTGATCCTACTGGCCTTGCACATAAAAGGCTTCCAGATTGACCTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39580 GCCAAGTTCTTCCACCAAAACTACATAATTCCCAGGATCAAAGCCAAGACCAAGAGCCAG Gene GeneID:539782|ELOVL3:XM_002698451:454_cdna Constitutive 0 NULL GeneID:539782 26 GENE ELOVL3 NULL elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 EMBV3_27970 CCCTGAGTGCGGTAGCGGCGGGGCGCGCAGAAACAGGAAAATGGCCTCACAGCTGAGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20094 CAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTG Gene BVV0101_063663 + 1 EMBV3_10211 GK000004.2:62683823-63052080 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00175509 TCONS_00253103 TCONS_00118459 TCONS_00118040 TCONS_00087263 TCONS_00210913 TCONS_00174805 TCONS_00087262 TCONS_00171428 TCONS_00004713 TCONS_00174806 TCONS_00232824 TCONS_00176420 TCONS_00004714 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00238380 TCONS_00174807 TCONS_00232829 14 XLOC_151107 XLOC_105290 XLOC_156044 XLOC_072622 XLOC_072206 XLOC_052424 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_001092 XLOC_142307 XLOC_106198 XLOC_145047 XLOC_142312 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_18747 GTTATCCGTCCACACAAGTCATTTGATGAGGCATGCCAGATTTCCTGGAGAAGCTGCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05853 CATGCTCATCTCGGCCGTCTGCTGCTTCTTCCTGTTTTTCGGCAACAGTGAGTCTGCGAT Gene GeneID:527014|SV2B:NM_001083448:29_cdna UTR3_Alt 2 NULL GeneID:527014 21 GENE SV2B MGC139563 synaptic vesicle glycoprotein 2B EMBV3_00776 CAGCATATGCAGAGCCAGAAAAATATCAACTTATAACGGCAAGTACAATCAAGAGATGAC Gene BVV0102_061682 + 0 NULL GK000004.2:61476980-61611419 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11072 CGGCTATCGATGGATCTGCAACCCGCGCGGACCCAAAGCTTGTGGAAGAAGGCCCAGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35198 ATAGGCGTGAAATGTGTCTTGTGGGCTTGCTAGGCGAGGCCGTCACTTCCTAAATTCCTT Gene BVV0102_322009 + 1 EMBV3_27831 GK000018.2:58631955-58668780 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15457 ACAGTACCTGGCAGGATGGAGGGATCTAGTCAGGTTCGTAACTCCCCTCGGCTCCATCTT Gene GeneID:100300004|LOC100300004:XM_002695796:358_cdna Constitutive 0 NULL GeneID:100300004 19 GENE LOC100300004 NULL hypothetical protein LOC100300004 EMBV3_08697 TTAGAAACCCGGCACGGGCGCTTCTGTGGTGAATGTTAGAATGTTAGGCGAACCTCTGCT Gene BVV0102_093647 + 1 EMBV3_22909 GK000029.2:29621749-29630842 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15680 GGGAATGAAGACACCGTGAGCCGGCTGGAGAGGCATCGATGTTGTGAGGAACAAAATCAA Variant GeneID:508652|RFC2:NM_001080903:122_cdna 183^331 1 EMBV3_40472 GeneID:508652 25 GENE RFC2 NULL replication factor C (activator 1) 2, 40kDa EMBV3_41350 GAAGTGGCAGAAGCAATCACTCAGTTTCTCCCTAACTGTGATCCAGATGACCCTCACAGG Gene GeneID:614880|PPM1H:XM_002687550:555_cdna Constitutive 0 NULL GeneID:614880 5 GENE PPM1H NULL protein phosphatase 1H (PP2C domain containing) EMBV3_30859 CGACATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCC Gene GeneID:100299187|LOC100299187:XM_002695289:82_cdna Constitutive 0 NULL GeneID:100299187 18 GENE LOC100299187 NULL similar to zinc finger protein 347 EMBV3_10239 TCTGGGAAAGAAGGTGCGCGTTAAGTGCAAACGATTTTTAAGGACCATGTGTCTCTGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15405 TGTCTTTCCCCTTCCCAGCCTCCGTTTGCAGTCACTCCTCTGCCTTTGAAATCTAGTGCA Gene BVV0102_138036 - 0 NULL GK000017.2:73635897-73694466 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24671 GAGGTGTATATTTTTCATAACGTGGGGGAAGTATTTGTGCTGCTCTCTGGGAACGGGCGC Gene GeneID:617455|CCDC85C:NM_001144998:315_cdna Constitutive 0 NULL GeneID:617455 21 GENE CCDC85C NULL coiled-coil domain containing 85C EMBV3_29093 TCAAGCCATCTCTGTACTCCACGAGGTGACCCAACACACCTTCCAGCTTTTCAGCACAGA Gene GeneID:616272|LOC616272:XM_002689513:127_cdna Constitutive 0 NULL GeneID:616272 8 GENE LOC616272 NULL similar to Interferon alpha-1 EMBV3_01639 TCCTGTTCTTCAACCTCTTCCTGGAGCGCCTGATCACCGGCATCGCCCACGTCACGAGGT Gene GeneID:787307|LOC787307:XM_002691090:215_cdna Constitutive 0 NULL GeneID:787307 10 GENE LOC787307 NULL similar to potassium channel, subfamily K, member 13 EMBV3_21871 ATCTATTAAGAGTGGCCCCTGAGAACCTGAGGACCTACCAGACATTCCCATCGGGGAAGA Gene GeneID:767918|MGC128001:NM_001076994:246_cdna Constitutive 0 NULL GeneID:767918 11 GENE MGC128001 NULL hypothetical protein MGC128001 EMBV3_02793 CTCTGGTCTCCAGTTTATGGCAATAATGTGTCCTGGTAAAACAGTCTGCAACTTTCCCAC Gene BVV0102_033530 - 1 EMBV3_37014 GK000006.2:32005925-32136523 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00903 TTAATATATGAAAATTATTATTCTTTTGGGGTTTAAAGAAATGGTCTGCATAACCTGGAG Gene GeneID:513673|LOC513673:XM_002684821:135_cdna Constitutive 2 NULL GeneID:513673 1 GENE LOC513673 NULL similar to serine/threonine kinase EMBV3_00598 TCTTCACCCGTAGTTCACACGAGTTTGATGGTAGGACAGGCTTAGCACCCGAATTTGCAG Gene GeneID:522039|FGA:NM_001033626:2_cdna Constitutive 0 NULL GeneID:522039 17 GENE FGA MGC128011 fibrinogen alpha chain EMBV3_30900 AGTCTTACAGTTCGCCTCTGTGAGCCTTTGCGGAATCATTGACGTTACCGGTGCTGTTAC Gene BVT0102_182176 + 0 NULL GK000017.2:74269897-74286481 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076382 TCONS_00076383 TCONS_00076380 1 XLOC_046813 Coding TCONS_00076380 XLOC_046813 Coding Coding SNAP29 17:74260971-74272436 j TSS57351 2274 1 TCONS_00076380_1 258 6 0.802163293789253 0.00167363557341782 0.00162881211950347 0.00057907451161068 0.000325503070494445 7.44988461764756e-05 1.57949278022574e-10 0.000278013215564713 0.000802334942952092 0.000295325936995431 4.16532644496629e-07 3.27095035340106e-08 4.54293734274952e-10 1.53091196983298e-08 2.89233382182349e-09 8.63910910910353e-09 0.00354263230355985 0.00111565580247009 0.00325038783191993 3.63591148997573e-07 0.000555117913682351 2.57573237278518e-05 0.00187401454125698 0.000494277543276629 0.000552750399381088 0.00111891797782827 5.56452292416591e-08 0.00171013605587138 0.000495302776521996 0.000717514012001451 8.17227671782174e-08 NM_001075959.1 SNAP29 Bos taurus synaptosomal-associated protein, 29kDa (SNAP29), mRNA. 0.0 1568 100.00 0.381706244503078 NM_004782.3 SNAP29 Homo sapiens synaptosomal-associated protein, 29kDa (SNAP29), mRNA. 0.0 758 81.35 0.34608619173263 TCONS_00076380_1 sp|Q0II86|SNP29_BOVIN SNP29_BOVIN Synaptosomal-associated protein 29; 0.0 526 100.00 0.996124031007752 1 coding 0 0 0 0 -0.408503621700969 0.165727482269489 -0.0642950623123131 0.40671799853966 NNCCGCACCAGACTCCTCCCGCCCGTCCCGGGCCGAGCGCCGGCGCCATGTCAGCCTACCCCCGGAGCTACAACCCGTTCGACGAGGACGCGGAGGACGAGGACGCCCGGCCGGCGCCGTGGTCGGACAGCCGCGACCTCGCGGACGGGCCCGGCGCGCCCGCCGACCGGCAGCAGGCCCTGCGGCAGGAGGTGCTGCGCCGGGCGGAGGCCACGGCCGCCAGCACCGGCAGGTCCCTGTCGCTCATGTACGAGTCCGAGAGGATCGGAGTCGTCTCCGCCGAGGAGCTCGTGCGCCAGCGCGGGGCCTTGGAGCGCACAGAGAAGATGGTGGACAAGATGGAGCAGGACCTGAAGACCAGCCAGAAGCACATCAACTCCATCAAGAGTGTGTTCGGGGGGCTCGTCAATTACTTCAGGTCCAAACCTGCCGAGACCCCGTCTGCGCAGAACGGCACCCTCACCCCCCAGCCCAGTGGCAGATTGAAAGACGCCATCAACTCCAGTAAAGAGCAGGAGGCACAGTACCAGGCCAGCCACCCGAACCTCAGGAAGCTCCAGGACTCAGACTCCATCCCTGGAGGGGCCGGTTCAGCTGTGAGCTCTGAGGCTTACCCGCGGAATCCGCACCTTCGCGCCTGTCACCAGAGGATCGACAGCAACCTCGATGAGCTGTCCGTGGGCCTGGGCCGGCTGAAGGACATTGCGCTGGGAATACAGACGGAGATTGACGAGCAGGACGACATCCTCGACCGCCTCACGAGCAAGGTGGACAAGCTAGACGTCAGCATCACCAGCACCGAGAGGAAGGTGCGGCAGCTCTGAGGCGGAGGCGGACTTCCTGCCCACCGCAGCGAAGAGATTTCAAAGGTGACCACCTCTGCGGGCAGACACAGCTTTCTGTCATGCTGCAGCCGCCTCGTGAGGCTGACCCATGTCACTGCACCGCTGGGAATGTCCAGGACGCGCGGTGGAAGGCGACCCGATCCACGTCTGCTAACCTCCAGCCCGTCGTGGTCTTTCTCCTGGTAACTGGAAAAAGGAAAAATGTTAAATGTCTGCTTCGCCCACACTGAACCCGTTCAGGGCACCTCCAGCAAAAAGGCTGCTCGGAAGCGTGACTGCAGCACCCGGCACCAGCCCTGGGTCTTCCTCCCCGACGCCTTCCCCCGCAGGTATCGGGGTAACTTCCTGCTCATCGCGCTCAGGTGTGGGCCCTTGGAGGCGAGTCAGCGCACCTGGACCCAAGCTTCTGCGATGGCTCAGTAAACACGCAGAGGCCACTGCCTGCCTCTCGCATCACGGGGTTCGAGGCAACGCGGCACCTTTGTGAGGCTGCTCTCCCCACGCCCCCGCCTCTCACCCCAAGCTGTGGAGGGGAGGTTGGCCTCACTCTTCTGGAAATGTCCCCCCCACCACACACACACACCCCGCATGCACACACACACACACACACACACGGCCCATGTGTTTGGTTCTGTTCTCGTTCGAATCCCTTATTCTAAGGCCTGAGCCTTGTGCCTGGCGGGCAGCTGCTCCCACACCCACTGAGGGCCAGTGGCTGCTGCTCCACCAGCCGGCAGAGCCGCTCACACTCCTGGAGTGCAAAGGAGGACCGACCTGAGGGGCCTCCAGAATCCGCACGTGTCGGGACACATGGTGACTAAGGAGAAGAGCCTGCCTCCGGACGCACGTGTCAGGAGACCCGGGGGTGCTGGGCCGGGACCACCGCCTGGCCACGAGGGGTCCGAAAGACAGACCTGGATTTCCACGGTCCATCTGGAAACACACCGTGCCTTCCCAAGAGCAGCTTTCCTGACTCGAGGCTGGCTCCACGTCACATGTGCTCCGGACTTAGAGGCAAGAGTCCCTCCCGGGGCAGTGTTCTGACCCGGGTGGGCTGTAGTGGCCTCTGGGCTCTTTTCTGTGTCCTGTGGCCTAGGAGACCGCACTTAGCGTGGACAGCACGAGGGAAGCATGTCTTCACCTCGCGCTCTCTAACTTCTCTGTGAATAACGATTCTAAGCGTGCACGACACTAGCTTAGTGGAAGTCTTACAGTTCGCCTCTGTGAGCCTTTGCGGAATCATTGACGTTACCGGTGCTGTTACGCGTTTCCCGCTCTGATGAATACAAATGACGAGCGAGGCATTCAAAGCGCACCCGAGCGGGACTCCTGCCCACAGTCAGTGGCAGAGCAGCTCCCGAGCGTCATGCCTTCAACGCAACAAATGACCATAGTCCTTGAAATAAAATGTGATGTTTTTAATCAGACT EMBV3_19113 TCAGGCTTGAAAGCTACTCCCCAGGTCCTTCCCACAGAGGAATCTACTAACCTTCAGACT Gene GeneID:784007|LOC784007:XM_002685959:38_cdna Constitutive 0 NULL GeneID:784007 3 GENE LOC784007 NULL similar to LOC496253 protein EMBV3_27611 CCTGGGGACTTCAGCTGTTTCCCGCCGCTCCCTTCCCAAGTGTAACAGGTGTAATGGTAA Gene GeneID:281938|MYOD1:NM_001040478:42_cdna Constitutive 0 NULL GeneID:281938 15 GENE MYOD1 MGC143434 MyoD myogenic differentiation 1 EMBV3_33905 GCACTGCGTCTCCTTGACTACCTTGGCTCCCTCAAGAGCACCTATGAAACTCAGGTGAAT Gene GeneID:515297|TEX11:XM_002700044:165_cdna Constitutive 0 NULL GeneID:515297 X GENE TEX11 NULL testis expressed 11 EMBV3_21151 AAACAAACTCGGGTCCACACGCTGACATGCAGTAAAGCCAATCTACTGACACCAGGCTGT Gene BVV0102_341961 - 1 EMBV3_21066 GK000002.2:62130644-62162397 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102528 TCONS_00102527 TCONS_00102529 TCONS_00102530 1 XLOC_061887 Coding TCONS_00102527 XLOC_061887 NonCoding Coding ZRANB3 2:62148479-62178356 j TSS76319 1687 1 TCONS_00102527_4 95 0.737996443390634 3 0.943633685901727 0.00113153695351948 0.00221806680740687 0.0030449053180874 0.00172491637301145 0.00229321795540628 0.00127247778654466 0.000669534389914078 0.00110389845501725 0.00109522048601782 2.18563479595083e-19 0 1.20088264701229e-05 0.000391757108788358 0.00032094789472824 0.000103033876568686 0 0 0 0.00367336465717526 0.00242996353509297 0.00103607203762043 0 0 8.58373998505796e-257 0.00237723778274756 0.002860000539972 0.00248345485565457 0 8.74380144549898e-125 0 XM_003581840.2 ZRANB3 PREDICTED: Bos taurus zinc finger, RAN-binding domain containing 3 (ZRANB3), transcript variant X1, mRNA. 8e-81 306 100.00 0.0995850622406639 XM_005263809.1 ZRANB3 PREDICTED: Homo sapiens zinc finger, RAN-binding domain containing 3 (ZRANB3), transcript variant X1, mRNA. 2e-57 228 89.94 0.0995850622406639 0 noncoding GTGACACCACCCTGTTACCACACCTTCAACCAGTCAGAGAATTGTGCACAGCTGATCACATGCCCTGGGATGCCCCTCCCTTTCCTTGCCTTTAAAAATGGTTTGGTGAAACCTTTTGCGGATTTCAGGCTTTTGGAGCACTACACTTTCCTTCATCACAGCCTGGTGTCAGTAGATTGGCTTTACTGCATGTCAGCGTGTGGACCTGAGTTTGTTTTGGATCATCATGTCCAGAGGTCATAACATAAAAAAGTCTCTTACACCTCAAATTTCTTGTTCGACAAGTGAATCTTATAAACAGCTGGATTTTTTGCCTGACAAACTAAGAGCAAAGCTACTTCCTTTCCAGAAAGATGGCATCACTTTTGCCCTGAGAAGAGATGGCAGTGGCGGCAGACAGGATCTTGCATCTTCTTCATGATATGTGGGATCTTCAGCTGCAGCCTGCGAGATCGAGCTCCCTGACCAGAGATAAAACCCAGGACTGCTGCATTGGAGTTTGGAGTCTTAGCTGCTGGACCATTAGAGAAGTCCCCTATTTGTAGACTTTTTGATGATAGTCATCAAAAAGTGTGTGTGAGGTATGACGTGAAGACCTCATTTGGGTTTTGATCTCCGTTTCTCTAATAATTACTGGTGCTGAACATATTTTCATGTGCCTGTAAACCATCTGCATGTCTTCTTTGGGAAAATGTCTATTCAAATTTTCTGGGAGTTTTTTGTTTGGATTGTTTGGTTTTTTGATATTGAGTTGTATGAGCTGTTTGTATGTTTTGGATATTAACCCTTTGTCATATGCATCATTTGCAAATATTTTATCCCTTCTCATAGGTTGTCTTTTCGTTTTGTCAATGGTTTCCTTTGCCGTGAAAAAGCTTTTAAGTTTAATTAGGTCCTTTTTGCTTTTTTTTGCTTTTATTTATTTTGCCTTAGGAGACTGGTCCAAGAAACTATTTCTATGATTAATGTCAAAGACTGGTTTGCCTGTTTTCTCTTCTAGGAGTTTTATGGTTTCATGTTTATGACATTACTTTTATATGTAACATTTCTTTTGGTTGTATTACCTGAGCAGAAGAAATCCACATGGCAGGGAAACTAATAATGCAGAGATTCTCAGTCTTCTCCTAGCTTCTCTCTACTTCTCCCATTTGGGGTTTCATCGTTGAGCCTCGCCTCCCCTGCTTCTCCTTGCAGCCAAACTGGACCCAGGGATATTCTGGCTGCCAGTCTGTCTAGCCTGTTGTGTTGATTTAAAGAAGGGATTCTTGACCTGGTAATGCAAGTGTTCTCCTCACCTTGGAAATTCATCCTACTCTTTTGTTTCCCTGAGATGTGAAGCCAGAATGTTTTTTCTAGATATACTCCTTTAGATCTTGTTGGGCACTGGTGGTAAAGAACCCACCTGCCAATACAGGAGATGTAAGACACAAGGGTTTGATCCCTGGGTCAGGAAGATCCCTTGGAGGAGGAAATGGTAACCCACTCCAGTATTCTTGCCTGGGAAATACCATGAACAGAGGAGCCTGGAAGGCTACAGTTCTTGGGGTTGCAAAGAGTCAGACACAACTAAAGAACTTAGCACAGTTATCTTTGTTTTGCCTAGTGTTCAAATTGATTAATAACCATGTGTTAAATTTTTGAATCTGTGCTCCACTGAACTCAGTGTTATATACATTGCTTAAGTAAT EMBV3_17992 AGAGCCTCAGGAGCTGGACCCACTCGACCTGGATGACGTAAATGAGATAATCCGGAATGA Gene GeneID:511224|NFATC1:NM_001166615:11_cdna Constitutive 0 NULL GeneID:511224 24 GENE NFATC1 NF-ATc NF-ATc1 NFAT nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 EMBV3_28388 TCCCCATCCTCCAACCTCCACCTCCTAGAATATCTCAACGCTTCTGCAAGTAATGAATAC Gene BVV0102_223886 + 1 EMBV3_19179 GK000030.2:64659594-64684213 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247177 1 XLOC_151257 Coding TCONS_00247177 XLOC_151257 Coding Coding CAPN6 X:64683217-64708869 = TSS185175 3518 1 TCONS_00247177_2 641 0.0287094940306993 13 0.863358153678219 0 0 0 0 8.60453738354959e-11 7.33430307254601e-11 0 1.2205955665247e-10 0 0 4.55495120526956e-06 7.24988359806348e-11 6.03582224530728e-11 8.75626423230842e-11 8.53565078814115e-11 0.000811190122439497 0 0.000499249014377305 0 0 6.27246941912923e-11 0.000135101787875632 0.00110853182838317 0.000390760420505161 0 1.54236462532995e-10 1.25834791057334e-10 0.000133784511897913 7.45976253824154e-05 3.25563721901452e-05 NM_001192231.1 CAPN6 Bos taurus calpain 6 (CAPN6), mRNA. 0.0 4549 100.00 0.716600341102899 NM_014289.3 CAPN6 Homo sapiens calpain 6 (CAPN6), mRNA. 0.0 4226 86.13 0.999715747583855 TCONS_00247177_2 sp|Q9Y6Q1|CAN6_HUMAN CAN6_HUMAN Calpain-6; 0.0 1276 94.23 0.998439937597504 3 coding 0 0 0 0 0.0699484610639263 0.64017857313676 0.000354257477341774 0.996259786965068 AAATAGTTTTCAGGTTAAGAAAGCCAGAATCTTTGTTCAGCCGCACTTACTGGACAGACTTGGTAGAGGTTACCTGGTGAAGAGCAGCAGCAGAAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCGAGTCTCCTGGGATAACTCAGACTTAGTTTGACATTATGGGTCCTCCTCTGAAGTTCTTCAAAAACCAGAAGTACCAGGAACTGAAGCAGGAATGCATCAGGGATGGTAGACTTTTCTGTGATCCAACCTTCTTGCCTGAGAACGATTCACTTTTCTACAACCGACTGCTTCCTGGAAAGGTGATATGGAAACGTCCCCAGGACATCTGCGATGACCCTCGTCTGATTGTGGGCAACATCAGCAACCACCAGCTGACCCAAGGGAGACTGGGGCACAAGCCAATGGTCTCTGCATTTTCCTGTTTGGCTGTTCAGGAGTGTCACTGGACAAAGACAATCCCCAACTATAAGGAACAGGAATGGGACCCTCGAAAAATAGATAAATATGCTGGGATATTTCACTTCCGGTTCTGGCATTTTGGAGAATGGACTGAGGTGGTGATTGATGACTTGCTGCCCACCATCAATGGAGATCTTGTGTTCTCCTTCTCCACCTCCATGAATGAGTTTTGGAATGCCCTGTTGGAAAAAGCTTATGCCAAGCTCCTTGGCTGTTATGAAGCCCTTGATGGTCTGACCACCAGTGATATCATTGTGGATTTCACTGGCACATTGGCTGAAACTGTTGACATGCAGAAGGGAAGATACACTGATCTTGTTGAGGAGAAGTACAAGCTGTTTAAAGAACTGTACAAGACATTTACCAAAGGAGGTCTGATCTGTTGCTCCATTGAGTTTCCTGACCAGGAGGAACAAGAAGTTGAAACTGATTGGGGTCTGCTGAAGGGCCATACCTACACCATGACTGATATTCGCAAGATCCGCCTTGGAGAAAGACTTGTGGAAGTCTTCAGTACTGAGAAGCTGTATATGATTCGTCTGAGGAACCCCTTGGGAAGACAGGAATGGAGTGGCCCCTGGAGTGAGATTTCTGAAGAGTGGCAACAACTGACTGCAGCAGATCGCAAGAACCTGGGGATTGTCATGTCTGATGATGGAGAGTTTTGGATGAGCCTAGAGGACTTTTGCCGCAACTTCCATGAACTCAATGTCTGCCGCAATGTGAACAACCCACTTTTTGGCCACAAGGAGCTGGAGTCGGTGGTGGGATGCTGGACTGTGAATGATGATCCCCTAATGAATCGTTCAGGAGGCTGCTATAACAACCGTGATACCTTCCTGCAGAACCCCCAGTACATCTTCACTGTGCCAGAGGATGAGCACAAGGTCATCATGTCTCTACAGCAAAAGGACCTGCGCACTTACCGCCGCATGGGAAGACCTGACAATTACATCATCGGCTTTGAGCTCTTCAAGGTGGAACTGAACCGCAAATTCCGCCTCCACCACCTCTACATTCAGGAGCGTGCTGGGACCTCCACTTACATCGACACACGCACCGTGTTTCTGAGCAAGTACCTGAAGAAGGGCAACTACGTGCTGGTCCCAACCATGTTCCAGCACGGCCGTACCAGCGAGTTCCTCCTGAGAATCTTCTGTGAAGTGCCTGTCCAGCTCAGGGAGCTGACTATGGACATGCCCAAGATGTCCTGCTGGAATCTGGCTCGTGGCTACCCCAAGGTTGTCACCCAGATCACAGTGCATAGTGCTGAGGGCCTGGAGAAGAAGTATGACAATGAAACTGTAAACCCATATTTGATCATCAAGTGTGGAAAGGAAGAAGTCCGTTCTCCTGTCCAAAAGAACACCGTTCATGCCATTTTTGACACCCAGGCCATTTTCTACAGAAGGACCACTGACATTCCTATTATAGTTCAGGTATGGAACAAGAGAAAGTTCTGTGATCAGTTCTTGGGCCAGGTTATCCTGGATGCTGACCCCAGTGACTGCCGTGAACTAAAGTCCCTGTACCTGCGTAAGAAGGGTGGCCCAACCGCCAAAGTGAAACAAGGCCACATCAGCTTCAAGATTATTTCGAGCGATGACCTCACTGAGCTCTAAATGTTCAGCTCCAGGGAAGCCTGACAGAGCTCTTCCATCCTTTCATTTTCTGTCAGATGCTAGATTTTATCTAGGATTCCCAATCTTTTGAGAGAGAAATTCACAGTAATTAACTTTCCTTTTCTTCTGATAAATTCCCTATACCTCTCGATCTGAGTAGCATAAGTAGCTACATAACCTATTTACCTCCAGCAGCTGGACAGGGGGAGGTGACAGTCCCATCTGGAGATTAGACAGATGTTGGCCAAGAAAAAAGATCTCTGGGGCTTCTGGGGGTGAGAGTCGAGCAGGACAACATCAGCCTGGATACTCTACCGATGTCATTGCCGTTTTCAGGTCCCCAATATGTCTCCCCTGTAGGGCATGTTGAGGAAGGGGGAGGGGTGATTGAGGCCAAGCAGGTCTAGCCTGACATCCCAGCTCCTGACTGAACACTAGAGCGGTCCCAGCAGCATTTTACACAGCACCCAGAGTCTGTTCATACGTCCCCAGCCCTTACCACCATCACTACCACCACCATCAGTCAACACCACCATCAATCTCCACCTCTGGAAAGAGTAGTCCTGCCCTAATCCAAGTCACCCCCCACAGTAGGTTTTACCTTCATGTTGAGGAAGCTTCCTAGGTGCTTAATCAAGAGCTAGAGTTCCCTGAGGCTCAGACAGTGGAAAGGGCCCGAGCTCAAGCTCCATGGAAACCAGCTGTGTGCCACAAGAGGGAAAAGTGGAAGAAGCTGCAGTGGGAGACAAAGCCTCGGTCCCCCACCCATCCACACACACCTACACTCACACACGCGCACATGGGCGCGCACGAACTACCGTTCAGGCAGTCAGTGGGCAAGAGGAAAGATGAATAAGGACCACACAGGATCAAAGGATGAAAGAGTCCATCCAGGCATAGTTCAGCTAGTTTGGGGCCCCTGACTGCAATGTGAAACCTCCTGCTGCTGCTAGGTTTACAAACAAGCCCATTGCCCTGTGCCTTCTAATATCATTGGTACTGAAGACCCCATCTGGGGGCTTGAGCCCCCTCAGGCTTCCCAGGTGGGAAGTGTCACTCCCTGGGGGTGTTTATTTGCCCTCTTGTATTTTTTCAGTCCTTCTACAGAATTTTCTCTGAAATGTTCTTCCCTCCACCTCATCTATCAACATTTTACCCCTCCTTCAAGGCCCAGCATAAAAGCCACATCCTCCATGAAGCCTCTCCCCATCCTCCAACCTCCACCTCCTAGAATATCTCAACGCTTCTGCAAATAATGAATACAATGACATAGTTGTAGCCCTTAGTCTAGTTCAGCACGCAATCATTTAAAAAATTATTTTGTAGATTATTTTTAGCTCACTCTTTCCTACCACGTTTTTCAGTCTATCTTCTCTACTGCCTCCACCACACTGCCTTACATAATCCAAAGCACAATAAAATTGACATT EMBV3_02483 TTCCTGAAGAACACTATCCCTTCCTGACCATCGTTCCAGCCTCCCACTTACCCTGAAAAG Gene GeneID:528834|CIDEB:NM_001034567:182_cdna Constitutive 1 NULL GeneID:528834 10 GENE CIDEB MGC127016 cell death-inducing DFFA-like effector b EMBV3_40211 TAACCCTAGTCCAGAGAGATGCTCTCCTCACCACGACGACCACCTAGACATGCACCTTCT Gene GeneID:616710|LOC616710:XM_002685073:203_cdna Constitutive 0 NULL GeneID:616710 1 GENE LOC616710 NULL hypothetical LOC616710 EMBV3_14041 TTTAAAAAACTCTTAGGGAGGGTGGGGGAGGCACTCGGAGCAGAGGTGGCTGTGTTAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10447 GTGAGGAAGAGAGGAGACCTGGGCAGGAGAGGTGAGGGTGTCCATCAATTTTAAGTAGTT Gene GeneID:534021|PGRMC2:NM_001099060:38_cdna Constitutive 2 NULL GeneID:534021 17 GENE PGRMC2 MGC139610 progesterone receptor membrane component 2 EMBV3_21057 CATTAGTAAGCAGCACCCCAGAGCAATTTCACCTAGAAGATTACCTTTGAATCTTGCCCC Gene GeneID:538989|NAA16:NM_001103100:166_cdna UTR3_Alt 2 NULL GeneID:538989 12 GENE NAA16 MGC152570 NARG1L N(alpha)-acetyltransferase 16, NatA auxiliary subunit EMBV3_17600 CTTACTAGCCTGTTATGTCGTCGAAAGAGAAACCAGCTTCCAGAAGAAAAGCAGCCCCTG Gene GeneID:280951|TYR:NM_181001:2_cdna Constitutive 0 NULL GeneID:280951 29 GENE TYR NULL tyrosinase EMBV3_00622 GCTGGCCACTATTTACGCTGCTCAGAGTAGCCGACGACAAGGCCAACACACAGCTCCTTC Variant GeneID:789903|TTC19:XM_002695862:338_cdna 552^646 2 EMBV3_00249 GeneID:789903 19 GENE TTC19 NULL tetratricopeptide repeat domain 19 EMBV3_06005 TGCCACCTCCTTGGACCCAGTCTTTTTGGTGCAAGAGCTTGGGTTGTTTACCTCAGATTC Gene GeneID:539374|LOC539374:XM_002684829:155_cdna Constitutive 0 NULL GeneID:539374 1 GENE LOC539374 NULL similar to Family with sequence similarity 43, member A EMBV3_14983 CCTGGCGCCTGCCTCAGCTGCCCTGAACAGTAAAACCACAAGCATTGAGAACCTGCGGCT Gene GeneID:540714|DMBX1:XM_002686415:367_cdna Constitutive 0 NULL GeneID:540714 3 GENE DMBX1 NULL diencephalon/mesencephalon homeobox 1 EMBV3_06017 ACCGCTTCGACTTCTACTTCCCGACGCCTGCTGCTCTGTGCAATGAAATCTGGAGTCACT Gene GeneID:539750|FOLR1:XM_002693434:67_cdna Constitutive 1 NULL GeneID:539750 15 GENE FOLR1 NULL folate receptor 1 (adult) EMBV3_30629 TGTGACCTGGGGACAGATGGCTCTGGTCTTGCCCTGTCCCAGAGTTCTCTGAAGATTAAA Gene GeneID:509974|GPR114:XM_002694793:619_cdna Constitutive 3 NULL GeneID:509974 18 GENE GPR114 NULL G protein-coupled receptor 114 EMBV3_14930 GGGGATGAGTCATCATGATCCCTGAAACAAGCACTCAAACAGGAGATCTTACACATGTTC Gene GeneID:514769|ZNF674:NM_001102010:20_cdna UTR3_Alt 1 NULL GeneID:514769 X GENE ZNF674 MGC151523 zinc finger family member 674 EMBV3_10419 CAAAGGAGAGATCAGAGCCCCAGAACAGCACAAGGCAGAGCCCAACCAGCTGAAGACCAA Gene GeneID:529131|DAPK2:XM_002690876:293_cdna Constitutive 0 NULL GeneID:529131 10 GENE DAPK2 NULL death-associated protein kinase 2 EMBV3_38092 GGCTCCTCCAGTTTGTAAGCAGCCAAGTGATTTTAGTGTGACTGGTGTTAGGGCAAGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28008 CTGAGGTCACTCATTGCCTACCTCACCACGGTGACCACCTGGACCATCCGAGACAAGTTT Gene GeneID:533007|COG4:NM_001034583:118_cdna Constitutive 0 NULL GeneID:533007 18 GENE COG4 MGC129017 component of oligomeric golgi complex 4 EMBV3_35659 TTCCACTCCCACTTGGGAATTTTGGACGCTGGTCAGCTTGTGGGTTTTCTAGGATGTTGG Gene GeneID:541070|MYLIP:NM_001102253:134_cdna Constitutive 0 NULL GeneID:541070 23 GENE MYLIP MGC159760 myosin regulatory light chain interacting protein EMBV3_15726 AAGAGTTGATACCATCAGTCAAAAGCTAATCTGTTACACTGGACTCAGAGATTCCATGTC Gene GeneID:788754|MGC152484:NM_001099209:116_cdna Constitutive 0 NULL GeneID:788754 1 GENE MGC152484 NULL hypothetical protein LOC788754 EMBV3_37058 TATCTTTGACGGACGACGTGTCCTGGACGGGCTCCACAATGAGCTACAAACCATTGGCTT Gene GeneID:281564|UGDH:NM_174211:5_cdna UTR3_Alt 2 NULL GeneID:281564 6 GENE UGDH NULL UDP-glucose dehydrogenase EMBV3_11903 TTTCCTTCACAGGCACAAACAGCAAGTCCGATACATTCACAGCACTAGGCAACACTCCCC Gene GeneID:100141015|BOSTAUV1R402:XM_002695059:413_cdna Constitutive 0 NULL GeneID:100141015 18 GENE BOSTAUV1R402 NULL vomeronasal 1 receptor bosTauV1R402 EMBV3_10700 GAGGGTGAACATCTTATGGAAGATGTTTCTGTTTTGCTAAACTGAATCTATGGCTTTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08587 CTCAGAGGGGGCAACAAATGAAGAAATACATGGCAGATACCGGGAGCTAGTGAAGACCTG Gene GeneID:515215|DNAJC22:NM_001075701:77_cdna Constitutive 0 NULL GeneID:515215 5 GENE DNAJC22 FLJ13236 MGC139118 DnaJ (Hsp40) homolog, subfamily C, member 22 EMBV3_36511 GGTTCGGGAATTCTGCCTCTAGGACTTTCATCCACGCCCGCTTCGACTTAACAGCAACAA Gene GeneID:538392|CDC42BPA:XM_002707734:308_cdna Constitutive 0 NULL GeneID:538392 16 GENE CDC42BPA NULL CDC42 binding protein kinase alpha (DMPK-like) EMBV3_01865 AGCTGCCACACATGCTCTTATATGAATGACCAAGGGAAATGTCTTCGTGGAGAGGGAGTC Gene GeneID:529863|ACRV1:NM_001075926:26_cdna Constitutive 0 NULL GeneID:529863 29 GENE ACRV1 NULL acrosomal vesicle protein 1 EMBV3_03900 CTCTGAGTTTTTGTTGCTCCATGTGGGTTTCACTAGTTGTGGCGAGTGAGGGCTACTCCC Gene BVT0102_145191 - 1 EMBV3_25537 GK000003.2:19309323-19361110 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175933 1 XLOC_105712 NonCoding TCONS_00175933 XLOC_105712 NonCoding NonCoding - 3:19344392-19344804 - TSS130692 412 1 TCONS_00175933_1 105 0.611650485436893 1 0 0 0 0.000202151174684105 0 0.000218697777697268 0 0 0 0 0 5.55626253794336e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 6.72667537310352e-05 0 0 0 0.000259226586302632 0 XR_230546.1 LOC100847624 PREDICTED: Bos taurus uncharacterized LOC100847624 (LOC100847624), 2e-50 203 100.00 0.269417475728155 0 noncoding 0 0 0 0 0.0646447813528806 0.669950978779486 0.020622365273978 0.666366794397772 GTGGTGTCTGTCATGCCTTGACAGCAGGAAGTCCTTTCTTTTTTTTACTTTTTAATATCTGTTTATTTATGCCTGCTCTGAGTTTTTGTTGCTCCATGTGGGTTTCACTAGTTGTGGCGAGTGAGGGCTACTCTCCAGCTGTGGTGTGTGAACTTCTCGTTGCTGTGGCTTCTCATTGTGGAGCACAGGCTCTAGGGCGGGTGGGCTTTAGTAGTTGCGTCGTGTGGGGTCCTCCCGGACCAGCGATCGAGCCCTTGTCCCCTGCATTGCTAGGCAACTTCTTAACCACTGGACCACCAGGGAAGCCCAGGAAGTCCTTCTTGAATTATAACTTTCTTTCCTCCTTCTGTAGTGGCAGAATCTCTCCATGTTCTCAGTGGAGGTAGAAAGAGTGCTGGCAACTGGCAGAGTG TCONS_00172341 . 3' 2099 TCONS_00172341 . 3' 2510 EMBV3_03999 ACTTTCCTAGCAGTGAGGAATCCGCCTTGCAGCTCAGGGGCCACAGATTCGATCCCTGAT Gene BVV0101_023090 + 1 EMBV3_27383 GK000022.2:58148609-58202079 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27548 TGAAGTCAAAACATTAAATCAGTGCAAATACAAAATATTCCATCCTTTGAGAAAGGGAGC Gene BVV0102_044780 + 0 NULL GK000012.2:1-91163125 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036074 TCONS_00036073 TCONS_00036075 1 XLOC_021065 NonCoding TCONS_00036073 XLOC_021065 NonCoding NonCoding - 12:91136348-91162984 - TSS26326 552 2 0.979350478693448 0 0 0 0 0 0 0 0 6.97407951544449e-06 0.000326481831328245 0.00022612604053902 0.000549149794842314 3.02304493225644e-06 2.31880510808059e-05 0 2.12919839134499e-05 1.41852814268058e-05 1.7374890446752e-10 0 0 0 0.00186246872956678 0.00184661901047378 1.13780558452631e-05 0 0 0 8.65595867344732e-06 0.000230988307892072 0.000967426022119713 XR_227421.1 LOC101908301 PREDICTED: Bos taurus uncharacterized LOC101908301 (LOC101908301), 0.0 762 99.30 0.777173913043478 0 noncoding 0 0 0 0 -0.120019459911334 0.353990799829582 0.0277784159223555 0.601676784508193 GAGCATCACAACTTCCCTTGAACTTCGTCTGGAAAAACAAATGCTGTTCAAGGACACTGAAAGAACCCTGATGTTGAAAATCAGATCTGTATTGTGAGCAATGCTTAGAAATCCGTGAGTTGAAGCATAGTATTATGCCTATCATCCTTGTATTTCCCTCAGTGAAATATTTTGAGAAAAGCTCTTCATTCATGTTGTAGGTTCATGAAGAAGCTAAATAGCATTAATCCTTTACATTTACAACTGTGAATGTAAATCTCCTGTGAATCCTATGTGACAACCGCACATACCAACATGATTTATTAGTATTAATATTTTTAGTCCTATTGTATGTCAACTAAAAAAATCTGTATGTAATTGTACATGAAGTCAAAACATTAAATCAGTGCAAATACAAAATATTCCATCCTTTGAGAAAGGGAGCAAAAAATCTATGTGCTTTGCCTATTGCATTTTTATGTATTAGATCCTTAAGTATTTTATTCACCACACCCAACTGAATGATTCACAAATCTTCAGAGAAGAAAGGATCACTTCTCTTTAACAATGAGT TCONS_00036065 TCONS_00036066 TCONS_00036067 TCONS_00036068 s 3' 32070 TCONS_00036065 TCONS_00036066 TCONS_00036067 TCONS_00036068 s 3' 32070 EMBV3_22962 ACGGCAGGAATCCCAGCAGAATAATGACCAGAACAGCAGCTTGAATACGCAAGTGATTAG Gene GeneID:505123|CHD1:XM_002689414:62_cdna UTR3_Alt 2 NULL GeneID:505123 7 GENE CHD1 NULL chromodomain helicase DNA binding protein 1 EMBV3_25268 ACTGTTCTTTGCAAGTGCTCTCTGCCGCCCCCCGCCTGGCAAACCTTAACACAGATTAAT Gene BVT0101_077475 - 1 EMBV3_00483 GK000002.2:38363856-38541900 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14186 AGTCCGCTCTGCCCCATAGAAGCTGTGTGATCGTGGACGAGCCATTTAACACAAGTCTCT Gene BVT0102_170071 + 0 NULL GK000017.2:59411036-59422962 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081072 1 XLOC_049954 NonCoding TCONS_00081072 XLOC_049954 NonCoding NonCoding - 17:59417394-59417659 - TSS61012 265 0.479245283018868 1 0 5.13422452392817e-05 3.79186702913859e-05 3.49208385681973e-05 0.000720737443483122 3.72617802121375e-05 0.000283464697214571 0 0 0.000178645312539761 0 0 0 9.74475102638256e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000464309316706269 0 0 0 0 noncoding 0 0 0 0 -0.189977219309572 0.153898781233506 -0.0471556404792429 0.401610259971639 GAGAGGAGGTGGGTGCCCAGCTGTCATGTGACGCACTCGAGGTCTGGGTGGGAGTCCGCTCTGCCCCATAGAAGCTGTGTGATCGTGGACGAGCCATTTAACACAAGTCTCTTTTGTATCTGCAAAATGGGCTAATAATAGTATCTGCCTTAGCGGGCGGTTGGGAGCTTCTCAAACTTGCTTGCGCATGAAAATCGGGTCTGGAATTCCATTTGAAAACCCATATTGCGAGCCTGGTGACATAGATGGGGGGACAAGTTAGGAT TCONS_00075698 . 5' 760 TCONS_00075698 . 5' 760 EMBV3_16086 AAGCTTGTCCTGATCCGGGAGATATGGAAGCCTGACAGGTTATGGTTCCCAGGGCAAAGT Gene BVV0102_281548 - 0 NULL GK000019.2:56247689-56256888 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31380 GATTGTGGGAACTGGGTCTCTAAAACCTGCAGTTTCTCTCATGCTGTACAAAGCAGACTG Gene GeneID:617777|SHE:NM_001098140:233_cdna UTR3_Alt 2 NULL GeneID:617777 3 GENE SHE MGC149000 Src homology 2 domain containing E EMBV3_41624 GGTGAATCCGAACCACCCCGTTCTCTTGGAGGACCCAGTTCTCTGTGCCATTGCCAAAAA Gene GeneID:100337056|LOC100337056:XM_002692183:59_cdna Constitutive 0 NULL GeneID:100337056 13 GENE LOC100337056 NULL aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)-like EMBV3_04029 ATCGAGTCCCAACCCAGGTGACTCAGAAACGCCTGCAGAGGAGAGCCCGGCTTCGTCTCT Variant GeneID:508633|CD8B:NM_001105344:59_cdna 540^629 1 EMBV3_19215 GeneID:508633 11 GENE CD8B NULL CD8b molecule EMBV3_20377 ACCAAAGCATACAATTTAAGTTGCTGCTTATTGACAGCAGAATTTTTGGATACTGGGGAC Gene GeneID:100313409|MIR2315:NR_031101:16_cdna Constitutive 0 NULL GeneID:100313409 15 GENE MIR2315 bta-mir-2315 microRNA mir-2315 EMBV3_38152 GGGTTGACAAAAATGTGACCAGAGGCTCACAAGAAACTAACCCCATATTTCCCCTAGGAG Gene BVT0102_177013 + 0 NULL GK000024.2:24787758-25005206 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11300 CCTGACTGGTTCACAAGCTACCTAGAGACACATCCATCCTTAGGTTCGTGTCCCTCAGAA Variant GeneID:515032|NBR1:NM_001100367:139_cdna 580^651 1 EMBV3_25600 GeneID:515032 19 GENE NBR1 NULL neighbor of BRCA1 gene 1 EMBV3_41805 ATTGCAATGTGTTTATTATAGGCTATTTGAACCGATTAAGGTTTTTCACTACAGTTCCTG Gene GeneID:527459|RICTOR:NM_001144096:36_cdna Constitutive 2 NULL GeneID:527459 20 GENE RICTOR NULL RPTOR independent companion of MTOR, complex 2 EMBV3_12596 GGGTGTGATACCCTTGGTTATTGTGGGGCGTGGATCACCTCTGATTTGTTGGGGTATCTT Gene BVV0102_153891 + 0 NULL GK000024.2:20129080-20156515 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141730 1 XLOC_086158 NonCoding TCONS_00141730 XLOC_086158 NonCoding NonCoding - 24:20147293-20148029 - TSS105941 736 1 TCONS_00141730_1 52 0.398097826086957 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.17703234063557e-05 0 0 0 0 0 1.00824344118965e-05 0.0004113355064032 0.00236891439011061 0 0 0 0 0 0 XM_005192950.1 CUL7 PREDICTED: Bos taurus cullin 7 (CUL7), transcript variant X1, mRNA. 2e-13 80.6 71.66 0.244565217391304 NM_173470.1 MMGT1 Homo sapiens membrane magnesium transporter 1 (MMGT1), mRNA. 2e-14 84.2 73.14 0.226902173913043 0 noncoding 0 0 0 0 -0.0834492034497645 0.5812140674006 0.0807282925522722 0.364630527478901 TATATGCATGTTTATTAAGCACAGATTCATGCGTTATAATAAAGATACCCCAACAAATCAGAGGTGATCCACGCCCCACAATAACCAAGGGTATCACACCCTGACAGAGTGATTTCCAGGTCAACATAAAGAAGTAATAAAGATTACTTACTTATTAATTACCACATAAAGAAGTAATACAATTGGCCTGTGCAGCTTTTCTCTGCAGACACAGAAGGTTTCCATCAGACTTTCTGAAATCATGAAAATTGCTCAGGGATTCTTGGTAACACCTGTGGGGACCAGTCTGGGAATCGAGAGGAGGCCCCTCTAACTTGGAAAAGCACCCTGTAGCCGGTCTGAACTTTCTCTTCCATCAGCTCTTCCGGTCTCTCCTTCCTTCACAGGCTGGTTTCTAAGATGAGCGGTTGTGGATGCATCGCTCTCCCCAACACCTCACAAATCGAAGCTTTCACTCGAGCCAGTTTAGAGCCTCGGAGATCAGGTGTTTGCTCGTGACTTCCCAGCACTCCTTGCCACCCAGCAACCAATGCCCCAGGACACTTCTCTTGTGGCAGTTTTATGTGATCTAATTCACATACCATATAATATACTAATTTAAAGGGTACAGTTTAGTCAGTGGCTTTTAGTATAGTCACAGTTATGCAACCATCACAATAAATTTTTAGAACGTTTTCATCACCCCAGGAGACATCCCACACTCTTTGGCAGTCACTCTCCATTACCCCCATCCCCT TCONS_00139830 TCONS_00139831 TCONS_00139832 TCONS_00139833 TCONS_00139834 TCONS_00139835 . 3' 7016 TCONS_00139830 TCONS_00139831 TCONS_00139832 TCONS_00139833 TCONS_00139834 TCONS_00139835 . 3' 7751 EMBV3_16373 GCACAGCATCCATGTTTAACCTTTTGTCTTTCAATTAAAGTGAAAACATATGAACTGTTC Gene GeneID:338039|CASP4:NM_176638:5_cdna Constitutive 2 NULL GeneID:338039 15 GENE CASP4 CASP13 MGC137679 caspase 4, apoptosis-related cysteine peptidase EMBV3_34070 AAGAAAACACCAGCAGTCCCGACCAAGAAAACCAGCACCACTTTCAACATCGTGGGAACC Gene GeneID:282237|GABRA3:NM_174542:89_cdna Constitutive 0 NULL GeneID:282237 X GENE GABRA3 NULL gamma-aminobutyric acid (GABA) A receptor, alpha 3 EMBV3_32949 AAAATGATCAAGCATGAAGTAGACATGCAGGTGGCAAAGGCTCGGCCAGAAGAGACAGAC Variant GeneID:514586|EPRS:NM_001034468:163_cdna 540^593 2 EMBV3_09297 GeneID:514586 22 GENE EPRS EPRS MGC128695 glutamyl-prolyl-tRNA synthetase EMBV3_35291 CAACTTCAAGCTTATGTGGACAAGTTTAGGTATCAGTATCAGACCTGGGGCAGAAGCCAC Gene GeneID:510807|NFE2L3:NM_001077899:7_cdna Constitutive 0 NULL GeneID:510807 4 GENE NFE2L3 MGC152000 nuclear factor (erythroid-derived 2)-like 3 EMBV3_17558 AAGTCTTTGCTGTCTTCTCCAACATTTTAGGATGGGCCCCTGGGAGACTTGAGGCCTTCC Gene GeneID:540482|ATG9A:NM_001034706:116_cdna Constitutive 0 NULL GeneID:540482 2 GENE ATG9A ATG9 ATG9 autophagy related 9 homolog A (S. cerevisiae) EMBV3_36698 GTACTCAGGACTGGAAGACACAGTAGAGGAAAAGCAGGAGGTGAACGTGGGAAAACCTCT Gene GeneID:504994|MALT1:XM_002697836:533_cdna Constitutive 0 NULL GeneID:504994 24 GENE MALT1 NULL mucosa associated lymphoid tissue lymphoma translocation gene 1 EMBV3_05134 TAGGTGGACTTTGTGTCTCTTTTGGATGTATCATGTCTCTCCAGCTCCACTGTAAGCTCC Gene GeneID:510463|WDYHV1:NM_001035091:23_cdna Constitutive 1 NULL GeneID:510463 14 GENE WDYHV1 C14H8orf32 C8orf32 MGC127299 WDYHV motif containing 1 EMBV3_35355 TTCACACGCAGGCTCAAGCCCGCCTTCTTCCTAGAGAGTGTAGATGCCCATTTGCAGATC Gene GeneID:618638|TRIM47:XM_002696173:145_cdna Constitutive 0 NULL GeneID:618638 19 GENE TRIM47 NULL tripartite motif-containing 47 EMBV3_15112 CATAGCCACATGAGGGCAGCAAAGAGTCAAGAATGCAAATGAGCAGCTACCTCCAAGAGG Gene GeneID:532898|TNS4:NM_001038155:160_cdna UTR3_Alt 2 NULL GeneID:532898 19 GENE TNS4 MGC126986 tensin 4 EMBV3_26432 CCAACAGGTGCGTGTTTTGTGTTCAGTCATTAAGTTGTACCCGACTTTTTGCGATCCCTG Gene BVT0102_228758 + 1 EMBV3_00691 GK000030.2:55895773-55945392 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21767 CAACACCTTCAAGAAGCCAACGGTCTTCACCCGTGTGTCTGCATACATCGACTGGATCAA Gene GeneID:514047|CTRC:NM_001098965:106_cdna Constitutive 0 NULL GeneID:514047 16 GENE CTRC NULL chymotrypsin C (caldecrin) EMBV3_40478 CTGTCAGAAGACATACAGCAATAAGGGGACCTTCCGGGCCCACTACAAGACCGTGCACCT Gene GeneID:524182|BNC1:XM_002696597:68_cdna Constitutive 0 NULL GeneID:524182 21 GENE BNC1 NULL basonuclin 1 EMBV3_42597 TGTTTACATGCACAAGCTTTGAGTTCTGAGCAAGGTGTGAACGAATCGATGCCAGATTCC Gene BVV0102_044974 + 0 NULL GK000009.2:66885926-66969957 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237591 TCONS_00237589 TCONS_00237592 TCONS_00237586 TCONS_00237588 TCONS_00237590 TCONS_00237587 1 XLOC_144760 Coding TCONS_00237588 XLOC_144760 Coding Coding PTPRK 9:66968013-67225902 j TSS177588 5750 1 TCONS_00237588_8 1109 0.0521739130434783 25 0.977800440501303 3.7682240967429e-23 0.000138026001372949 3.49300368925642e-05 0.000146176802076638 6.60518582367597e-17 3.25709499534591e-11 7.54376193809895e-05 8.65988905272012e-05 2.15405848138288e-05 4.43044593090934e-12 2.01984940385154e-15 1.66011152055914e-14 3.68309906241797e-14 2.50433472429974e-11 1.70617392389244e-10 0.00312869871383999 0.000698919508889764 0.000434616043953486 1.06958626610833e-16 3.19541893846312e-26 9.26084094214347e-11 0.000217426972502934 0.000382440368540985 0.000874956360148501 4.1970511391607e-05 2.86327750465702e-10 4.28828332150415e-06 5.86450521200435e-14 1.14533809628184e-10 7.74546525284219e-10 NM_001191537.1 PTPRK Bos taurus protein tyrosine phosphatase, receptor type, K (PTPRK), 0.0 8825 99.61 0.854782608695652 NM_002844.3 PTPRK Homo sapiens protein tyrosine phosphatase, receptor type, K (PTPRK), transcript variant 2, mRNA. 0.0 6929 91.33 0.853913043478261 TCONS_00237588_8 sp|Q15262|PTPRK_HUMAN PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase kappa; 0.0 2259 99.28 0.999098286744815 3 coding 0 0 0 0 -0.101091459134231 0.40421923362001 0.00406771151630953 0.945174633927284 CAATCCATTATTCTTGCCTGGGAAATCCCTTATAAGTAGAGGATTGGAGGGATTTGGCTACAGAGAGAAGAGGAAAAGGCAGTGTGAACTGTGAAATAGAGACTGGAGTAATGTGGCCAAAAGCCACCGGATACCAGCTGCTAGGAGATACTAGAAAAGGCAAGAACCACCGAGACCCATTGCTCCTCCCCAGCTACTAGGCGTTGGGCCTACATACTTGCTGATTCAGCTAAATGCCAACTCCATCATTGGCGATGGTCCTATTATTCTGAAAGAAGTGGAGTACCGAATGACATCAGGGTCCTGGACAGAAACCCATGCAGTCAATGCGCCAACTTATAAATTATGGCATTTGGATCCAGATACCGAATATGAGATCCGTGTTCTGCTTACAAGACCAGGTGAAGGTGGAACGGGGCTTCCAGGACCTCCACTAATCACCAGAACCAAATGTGCAGAACCTATGCGAACCCCAAAGACTTTAAAGATTGCTGAAATACAAGCAAGACGCATCGCTGTGGACTGGGAATCCTTGGGTTACAACATCACTCGGTGCCACACTTTTAATGTCACTATCTGCTACCATTACTTCCGTGGTCACAATGAGAGCAAGGCAGACTGCTTGGACATGGACCCCAAAGCCCCTCAGCATGTTGTGAACCATCTGCCACCTTATACAAATGTCAGCCTCAAGATGATCCTAACAAATCCAGAAGGCAGGAAGGAGAGTGAAGAGACGATTATTCAAACTGATGAGGATGTGCCTGGCCCTGTACCAGTCAATTCTCTTCAAGGAACCTCTTTTGAAAATAAGATTTTCCTGAACTGGAAAGAACCTTTGGATCCAAATGGAATCATCACTCAATATGAGGTCAGTTACAGCAGCATAAGATCATTTGATCCTGCAGTTCCTGTGGCTGGACCTCCCCAGACTGTATCAAATTTATGGAACAGTACACACCATGTCTTCATGCATCTCCATCCTGGGACCACCTACCAGTTTTTCATAAGAGCCAGCACTGTCAAAGGTTTTGGGCCAGCCACAGCCATCAATGTGACCACCAATATCTCAGCTCCAACTTTACCTGACTACGAAGGAATTGATGCCTCTCTCAATGAAACTGCCACCACGATAACAGTCTTGTTGAGGCCAGCACAGGCGAAAGGTGCACCTATCAGTGCCTATCAGATTGTTGTGGAGGAACTGCATCCCCACCGAACCAAGAGAGAAACCGGAGCCATGGAATGCTACCAGGTTCCTGTCACGTACCAGAACGCCATGAGTGGGGGTGCACCATACTACTTTGCTGCCGAACTGCCCCCAGGGAATCTTCCGGAACCTGCCCCATTCACAGTGGGCGATAACAGAACCTATCAGGGCTTTTGGAACCCCCCTTTGGCTCCACGCAAAGGATACAACATCTATTTCCAAGCCATGAGTAGTGTGGAGAAGGAAACTAAAACCCAATGTGTACGAATTGCCACCAAAGCAGCAGCAACAGAAGAACCAGAAGTGATTCCAGACCCAGCCAAGCAGACTGACAGAGTAGTGAAAATCGCAGGAATTAGTGCTGGGATTTTGGTGTTCATCCTCCTGCTCCTAGTAGTCATATTAGTTGTAAAAAAGAGCAAGCTTGCTAAGAAACGCAAAGATGCTATGGGGAACACCCGGCAGGAAATGACACACATGGTAAATGCTATGGATCGAAGCTATGCTGATCAAAGCACTCTGCATGCAGAAGACCCTCTTTCCATCACCTTCATGGACCAACATAATTTTAGTCCAAGATATGAGAACCACAGTGCTACAGCAGAATCCAGTCGTCTTCTTGATGTACCTCGCTACCTGTGTGAGGGGACAGAATCCCCTTACCAGACGGGACAGCTGCACCCAGCCATCAGGGTAGCCGACTTACTACAGCACATTAATCTCATGAAGACATCAGACAGCTATGGGTTCAAAGAGGAATATGAGAGCTTCTTTGAAGGACAGTCAGCATCTTGGGATGTAGCTAAAAAAGATCAAAATAGAGCAAAAAACAGATATGGAAACATTATAGCATATGATCACTCCAGAGTAATTTTGCAACCTGTTGAGGACGATCCTTCTTCAGATTACATTAATGCCAACTATATAGATGGCTACCAGAGACCAAGCCACTACATTGCAACTCAAGGCCCAGTTCATGAAACAGTGTATGATTTCTGGAGAATGATCTGGCAAGAACAGTCTGCATGCATTGTGATGGTCACAAATTTAGTTGAAGTTGGCCGGGTTAAATGCTATAAGTATTGGCCTGATGATACCGAAGTTTATGGTGACTTCAAAGTAACTTGTGTAGAAATGGAACCACTGGCTGAATATGTAGTTAGGACATTCACCCTGGAAAGGAGGGGATACAATGAGATCCGTGAAGTTAAACAGTTCCATTTCACTGGCTGGCCTGACCATGGCGTGCCCTACCACGCTACTGGCCTCCTGTCCTTCATCCGGCGGGTCAAATTCTCCAACCCTCCCAGCGCTGGTCCCATCGTTGTGCATTGCAGTGCTGGTGCTGGACGAACTGGTTGTTACATTGTGATTGACATCATGCTGGACATGGCTGAAAGAGAGGGTGTTGTTGACATCTACAACTGTGTCAAAGCCTTAAGATCTCGTCGTATCAATATGGTCCAGACAGAGGAACAGTACATTTTTATTCATGATGCCATTTTAGAGGCCTGCTTATGTGGAGAAACTGCCATACCTGTTTGTGAATTTAAAGCTGCATATTTTGATATGATTAGAATAGACTCCCAGACAAACTCTTCACATCTCAAAGATGAATTCCAGACCTTGAATTCAGTCACCCCTCGACTACAAGCTGAGGACTGCAGTATAGCATGCCTGCCAAGGAACCATGACAAGAACCGTTTTATGGACATGCTGCCACCTGACAGATGTCTGCCTTTTTTAATTACAATTGATGGGGAGAGTAGTAACTACATCAATGCTGCTCTTATGGATAGCTACAGGCAACCAGCTGCTTTCATCGTCACACAATACCCTCTGCCAAACACTGTGAAAGATTTCTGGAGATTAGTGTATGATTATGGCTGTACCTCCATTGTGATGTTAAATGAAGTCGACTTGTCCCAGGGCTGCCCTCAGTACTGGCCAGAAGAAGGGACGCTACGATATGGTCCTATCCAAGTGGAATGTATGTCTTGTTCAATGGATTGTGATGTAATAAACCGAATTTTTAGGATATGCAATCTAACAAGACCACAAGAAGGTTATCTGATGGTGCAGCAGTTTCAATATCTAGGCTGGGCTTCTCATCGAGAAGTGCCTGGCTCCAAACGGTCATTTTTGAAGCTGATCCTGCAGGTGGAAAAATGGCAGGAGGAATGTGAGGAAGGGGAGGGCCGGACGATCATCCACTGCCTAAATGGTGGCGGGCGAAGTGGCATGTTCTGTGCTATAGGCATTGTTGTTGAAATGGTGAAACGCCAAAATGTTGTTGACGTGTTCCATGCAGTCAAGACACTAAGGAACAGCAAGCCAAACATGGTGGAGGCCCCGGAGCAGTACCGTTTCTGCTATGACGTGGCTTTGGAGTACCTGGAGTCGTCTTAGTTGGAGACTTCAGAGTGCATCCCAACAGAACCCATTCATCTGTTGAGCCAGCAGCTGTTGTACCTGTCACACCTGTGCAGAAAGATTTTAATGTGGGGGGGTGGGGGCGGGAGACTTTTACATTTGAGAGGTAAAAGTATTTTTCTTATGAAGTTGTGTATCTTAATAAAAAGGACTCACTCAATTAGTTTCTATTACTGTATGAGAACATCAACATTTCATGCCACATAAATTATATTTCATAAGCAGCAGATTCACATGAAAACTTATCAGTGTTTGTACAGTGAATAGGCAGCGTTTTCTCTCCTGGTTTTGGTACAGCAGCCAACACGTGTTGCATGAATTAATACTTTCTTTGTGGCATTTTTCTCCCTTTTTCAGATAAAAGATGTTAAAACTTTCAAGGAAGAAGAAAGAAAAGCTGTGCAAATTCATAGGAAAGTTCATTTTTTATATGTTTCAAGTGTAGCAGATCTCTATATAAATATATAAATATATATAACTGGCTTATTTTCTTTTAATGTGCAATGATGGATGGATCATTTAAAGTTCTTTCTTAAAAACAAAAAACCATAAGCCAAAGACTCAAGTGTAAATATGTCTATATGGAGAAAGCACATTATATTTATTGGTTACTTACATTCCTTTTTTGATGGCTAAAATACTACCACCACACAATCTTTTTTTTTTTTTTTTTGAAGAAAGGTTTTTCTTTCACTAAAATCAATTGTAAACAATTTTTGTAGATTATTTTTTGTATGTTTAGTGTAAGTAGAGGGTAAACTTTTTAATTCATAAATCAGGAAGCAATGTTCTTTAAAGTGATTCTCTTGTGTACATGCTTGTGAATTAAATTTATGTAAAACACCTTGGCATTTGGGTCTTTTAATGTAGGACCAAATTAAAACATTTTGCTGAAAATATATAATTTTTCATGATTTCCTTAGGTCAGTATGGTTTGGTAATCATTATGAGAACTGCACACATTCAAAGGCCTTGCTGATGACTTGTGTAATGTTGAACATAACCTTTAAGCATCATTTAAATTTTAAAGGGATTGGTCTTTTCAGCCTATGACCAAGCACTGGTCAAAAAATCAAAACTGCAACATTTATGCTTCTGCAGTCAAGTGTTAGCAAACTGTAAACTGTCAAGGTGATCCAGTGTTTCTTTTGATGTTTACATGCACAAGCTTTGAGTTCTGAGCAAGGTGTGAACGAATCGATGCCAGATTCCTATTTTGTGCATCATCATGGGATTCTCAAGTGAACCTTTTTAAATGTGATCTTGTACACTTGCTCCGTGTAGCTGTAATTTCACATCATCAGCTTGCAGTTTGTTATTGACTAAAGCATTCTAGTATCCTCTTTTTAGATTGCCAGTTCATGACATGGTGCTTATGAAGATTTAATTAAAGTAAGAGTGAAATAAAACTTTTATAATTACAGCAGTTATTGTTTACACATCATTTTCTCCCCTTAATTTTCATGCCTTCACTCCCAAATAAATACCCTATTCTCCGTGACAAAAGTAGACAACATGAAATCTATTAAAAATAAAACTGATGTCCAGATACAAATTTCTTTCATTTTTACTCTTTAACTTGAATTTTCAAAATTCCAAATGAGTGGAGAGAAAAAAAGGACAGGGAATTAACACCAACTTTTTTTTTTTAAGTTACTGTATTTATATGTCACTACCATTTTATGTAATATAAATTTCCTTATTTCTCCATATAACACAAATAGTAATTGTCATCCCAATTTTACCAGTGATAAAATTGAATCTGAGAGGGTAAATGTTTTGTCAACAGATGTAAATCTGAGTCTGAGGCTTCCCTAAAGACTCAGTGGTAAGGAATCCACGTGCCAGTGCAGGAGACATGGGTTTGATCCCTGATCCAGTAAGATCCCACGTGTCACTTAGCAACTAAGCCTGTTGAGCCTGTACTCTAGAGCCTGGGAACCACAACTACTGAGCCCATGCACCATAGAGCCCGTGCTCCCAAACAAGAGAAGCCACTGCAATGAGAAGCCCACACATCGCAACTATAGTCCCCACTCATCACAACCAGAGAAAAGCCCGTGCAGCAATGAAGACCCAGCACAGCCAAAGAAAAAAGAAAAAAATC EMBV3_10962 GTTAGGGGTCAGCCATTTTTAATGATCTCGGATGACCAAACCAGCCTTCGGAGCGTTCTC Gene GeneID:786336|PTMA:XM_002685597:211_cdna Constitutive 0 NULL GeneID:786336 2 GENE PTMA NULL prothymosin, alpha (gene sequence 28) EMBV3_20062 GTTAGGCCGTTAGTGGCTCCTGGTATATTAATTTTGGCTGAAGTTCCTCCATTACCCAAG Gene BVT0102_147207 - 1 EMBV3_24264 GK000018.2:1620809-1655993 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19178 CTGACTATCTTGATACTAGTGTTTGCGGTGAGCTGGATGCCTCTACACCTTTTCCACGTG Gene GeneID:781872|NPY5R:NM_001102527:52_cdna Constitutive 0 NULL GeneID:781872 6 GENE NPY5R MGC165958 neuropeptide Y receptor Y5 EMBV3_28766 AGAGTTGTCATCTTTCAGCAGGAGCAGGAGAACAAAATCCAGTCTCATAGCAGAGGAGAA Variant GeneID:508045|PPP2R2A:XM_002689788:19_cdna 99^168 1 EMBV3_32973 GeneID:508045 8 GENE PPP2R2A NULL protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha isoform EMBV3_35954 AAAAACTTGCTGCCCCAACGCTGTGTGCCCCTAGAGAAAGGGATCTTGGTGCTGACCTTT Gene GeneID:614467|TEDDM1:XM_002694222:104_cdna Constitutive 0 NULL GeneID:614467 16 GENE TEDDM1 NULL transmembrane epididymal protein 1 EMBV3_05654 TCCTGGACTCCGTATGAGGACATTGAGAAGCAGGATGCTAAAATCAGTGTCATGAGCAAG Gene GeneID:507125|C3H1ORF50:NM_001034279:92_cdna Constitutive 0 NULL GeneID:507125 3 GENE C3H1ORF50 MGC127856 chromosome 1 open reading frame 50 ortholog EMBV3_09505 CTGAAACACGTAGGCTTCCTCGATTCCTAGAGCAAAACAAAGTCGCCTGGCATCAAAGCC Gene BVT0102_069323 + 0 NULL GK000017.2:51378086-51409136 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080653 1 XLOC_049537 NonCoding TCONS_00080653 XLOC_049537 NonCoding NonCoding - 17:51382150-51382810 - TSS60593 660 2 TCONS_00080653_2 65 0.113636363636364 1 0 0 0 0 0 0 0 0 0 0 0 0 8.12654175920927e-05 0 0.000142545061282694 0 0.000200087665704534 0 0 0 0 1.60985296789447e-06 0 0 0 0 0 0 0 0 3.64378524920252e-05 XM_005193233.1 LOC100849124 PREDICTED: Bos taurus melanoma antigen preferentially expressed in tumors-like (LOC100849124), transcript variant X2, mRNA. 0.0 657 98.67 0.56969696969697 0 noncoding 0 0 0 0 GAAACTTTACAGGGTTTTGCGAGACCACAATAAGACGAATGACACTCAAGGAAGTAACGGGAAAATTCTGAAACACGTAGGCTTCCTCGATTCCTAGAGCAAAACAAAGTCGCCTGGCATCAAAGCCACCTTGGCTTGCTTTAATCAAGCGAACTTGCTTAGCAACAAAACCATGCAACACAAGCGTGAGACATGGCCCAAAACCATAAAACAGTGCTGGCCTGAGACTTGCACCCTGCCGAGTGAGCTCCGTGAGTCAATAACCCCCACAACATGCTCTTGGGCCCCCAAGACAAGACACGTTCTGGCCAGAATGCGTCCCCGAACAATACAACGATAGCCGAAAACAAGACCTACAACCTGCCCAGTGGTCATCAAGGTAGTGACTCCCCAAAACAGGCCCTGGACAAACCAAACACAATCACCTACGGAAAGGTGCCTTTTTCAAATCAAAGACCTGCATTGTCCTGAGACCCGAAAACAGTTTGCCCAAGTAACGTGACAGGGAAGTCTAGGGTGCTGCGGTCCACGGGGTCGCAAAGAGTGGCATACGACTGAGCAACTGAACTGAACTGAACTATGATAGTCCTAGCCTGACCACATAGAAAGGGACAAGGAAACTTCCCTGCCCTACCTGGGGGAGGCACTGATGATAGAAAC TCONS_00077234 . 5' 1688 TCONS_00077234 . 5' 1688 EMBV3_41842 CACCCCAATTTGTAAAGGCTGCCAAGTTACTCCACTGGAATGGGCACTTTAAGCCATGGG Gene GeneID:512192|GLT8D1:NM_001015579:151_cdna Constitutive 0 NULL GeneID:512192 22 GENE GLT8D1 MGC137822 glycosyltransferase 8 domain containing 1 EMBV3_15252 AAATGCTATTTACTAGAGCCCGAGAACAGTGGCCCAGAGAACTGCCTGTACGACCTCGCT Gene GeneID:529395|USP3:NM_001102123:82_cdna UTR3_Alt 2 NULL GeneID:529395 10 GENE USP3 MGC142882 ubiquitin specific peptidase 3 EMBV3_32703 GAAACAAGCTGTGGCCCCCGAAGAACGAGATCGCCTCTACCGAGCCCGAAAGAAATGCCA Gene GeneID:539138|ZNHIT2:NM_001040560:74_cdna Constitutive 0 NULL GeneID:539138 29 GENE ZNHIT2 MGC134483 zinc finger, HIT type 2 EMBV3_42871 GCTGGTATATCGACCTGGTTTCAAGGGATTTGCTGGCTCTCTTTATTTTCCACAACAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21664 TTCTATGTGGAAGGATGACCCAGTCGCCATTTTCTCCCATCCGCACTGTATTTACTGGGG Gene GeneID:615488|LOC615488:XM_002707719:53_cdna Constitutive 0 NULL GeneID:615488 12 GENE LOC615488 NULL similar to fibroblast growth factor 14 EMBV3_35996 ACTGACGTTCCTGGGGAAGTACCGCGAGTTCCACCGCTTATACGGAGAGAAATGCTTTGT Gene GeneID:510540|NUP85:NM_001034387:377_cdna Constitutive 1 NULL GeneID:510540 19 GENE NUP85 MGC127809 nucleoporin 85kDa EMBV3_17203 TCTCTTGCGTCTCGTCCGGGGTGACATGATGGTGATGAGGAGATGGATGAAGACACTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20923 CCAGAGGAGTGTGTTTCTGAAGAGGAATTACCTGACATGCTTGAGAAGCGGGTTACACAC Gene GeneID:613977|LOC613977:XM_002684771:282_cdna Constitutive 0 NULL GeneID:613977 1 GENE LOC613977 NULL similar to TPA-induced transmembrane protein EMBV3_22583 TCTGCTTGTCGCCCATGATATAGTCGTTGTGGCTGATGTAGTTGTACACCAGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_43241 ATAAACGAGGTAACTGGAGAAATCACCTACCCTCAGCAGAAGACAGACGCACCCGCAACG Gene GeneID:782599|LOC782599:XM_002696876:307_cdna Constitutive 0 NULL GeneID:782599 22 GENE LOC782599 NULL hypothetical LOC782599 EMBV3_02210 AAGGAAGAGGAGGGCTATAGTTGGGGAAGACAGGGGCAAGGTCCTCAGAAGGCCGAGAAT Gene GeneID:281179|G6PD:XM_002699716:103_cdna Constitutive 0 NULL GeneID:281179 X GENE G6PD NULL glucose-6-phosphate dehydrogenase EMBV3_04923 CGCTGAAAAAATCCTGCACAAGAAGATTATATCCTCCAGGGACCAAGCACTGTCAAGTCC Gene GeneID:510160|TTC30A:NM_001081716:23_cdna UTR3_Alt 1 NULL GeneID:510160 2 GENE TTC30A MGC148417 TTC30 tetratricopeptide repeat domain 30A EMBV3_23893 AACCTAGAAAGCAGGTTCACAGAGTCACCCACCTCCCCAGGCCACAAGCATCTGCAAGGT Gene GeneID:281236|IFNAC:NM_174085:74_cdna Constitutive 0 NULL GeneID:281236 8 GENE IFNAC NULL IFN-alpha C EMBV3_04850 AATATGTGGGATGTTGACATGTATAAGAAGCACTTTCAGAATGTTGTCCTTTTTAAGAAA Gene GeneID:522344|RGL1:XM_002694211:61_cdna Constitutive 2 NULL GeneID:522344 16 GENE RGL1 NULL ral guanine nucleotide dissociation stimulator-like 1 EMBV3_28076 AGCTCCCCTCTTGTCAGAAACTAGAACTGGAGGAAATGGATGTAGAAGCTCGACTTACTG Variant GeneID:532081|LOC532081:XM_002690005:24_cdna 695^772 1 EMBV3_29652 GeneID:532081 9 GENE LOC532081 NULL similar to Protein FAM135A EMBV3_03800 GGCACAGATAGCCCCGCCGCGCGAGACTGCAGCCTGGCTGACTACGCTTTCACCAGCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27077 CACTGGGCCTGACTCCATGCCTAGGTGACACAGAGTGACCATCTTGGACTTTCAGTTTAA Gene BVT0102_163573 + 0 NULL GK000007.2:45595694-45599592 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216837 TCONS_00216848 TCONS_00216836 TCONS_00216846 TCONS_00216839 TCONS_00216849 TCONS_00216845 TCONS_00216840 TCONS_00216847 TCONS_00216841 TCONS_00216844 TCONS_00216843 TCONS_00216838 TCONS_00216842 1 XLOC_131357 Coding TCONS_00216837 XLOC_131357 Coding Coding TCF3 7:45598408-45617974 j TSS161628 3901 1 TCONS_00216837_4 602 0.0297359651371443 17 0.801482238691541 0.00330215142606815 0.00329454091407928 0.00682095744519904 0.00349521056747085 0.00409695391241423 0.00114152120340508 0.00265780480009479 0.00388142070658759 0.00170621742103528 0.00138503466640996 7.35787477793793e-05 9.13418239317559e-21 0.000734364302690889 0.000222637420625116 0.000664890908868235 1.0788700632974e-14 2.68746427560781e-07 0.000526604209825322 0.0019323948983199 0.00719362984014165 8.19047748766225e-16 0.000306921774347893 3.07950208290618e-15 2.68765955337109e-07 0.00849132693732731 0.004169009746377 0.00209032768740826 1.43429631807182e-07 5.09390479641125e-09 7.60779056986521e-08 XM_005209298.1 TCF3 PREDICTED: Bos taurus transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3), transcript variant X1, 0.0 6974 99.97 0.991796975134581 NM_003200.3 TCF3 Homo sapiens transcription factor 3 (TCF3), transcript variant 1, 0.0 1885 82.71 0.460394770571648 TCONS_00216837_4 sp|P15806|TFE2_MOUSE TFE2_MOUSE Transcription factor E2-alpha; 0.0 900 78.91 0.98671096345515 1 coding 0 0 0 0 0.009648802475138 0.938196389275579 0.00642622378840069 0.909945556293765 CAGCTGATGTCACCTTGGTCCTGCTTTTCTGGTCTCGAGGACCGGCCAAGTTCGGGCTCATGGGGCACCAGTGAGCAAGACAGTTCCTCCTTCGACCCCGGCCGGACCTATAGTGACGGTGCCCACTTCGGTGAGTCCCACAGCAGCCTCCCTTCTTCCACATTCCTGGGCCCCGGGCTTGGAGGCAAGGGCAGTGAGCGGGGCGCATACGCTGCCTTCGGGAGAGACGCTGGCGTCAGCAGCCTGACTCAGGTGGGCTTCCTCCCCAGTGAGCTGGCCCTCAGCAGCCCAGGGCCTCTGTCCCCCTCGGGCATCAAGGGCGGGTCACAGTATTATTCCTACTCTGGGCACCCTCGGCGGAGAGCAACGGACAGCAGCCTGGACTCGCAGCCCAAGAAGGTCCGGAAGGTGCCGCCTGGCCTCCCGTCTTCAGTGTACCCCCCCAGCTCAGGGGACGACTACGGCAGGGACCCCACGACCTACCCATCCGCCAAGACGCCCAGCAGCTCCTACCCCACCCCCTTCTACATGGCAGATGGCAGCCTCCACCCCTCTGCTGAACTCTGGAGCGCCCCAGGCCAGGCAGGCTTTGGGCCCATGCTGGGCGGGGGCTCGTCCCCCCTGCCCCTCCCGGCAGGTGGCGGCAGCTCTGTGGGGGGCAGTGGCGGGTTTGGCAGCCTGCACCAGCATGAGCGCATGGGCTACCAGCTGCACGGAGCAGAGGTGAACGGCGGGCTTCCAGCCGCATCTACCTTCTCGGGCCCTGCAGGCACCTACAGCAGCATCTCCAGCCACACGCCCCCCGTCAGCGGGGCAGACAGCCTCCTGGGCTCCCGTGGGACCACATCCAGCAGCTCCGGAGATGCCCTTGGCAAGGCCCTGGCCTCGATCTACTCCCCGGATCACTCAAGCAATAACTTCTCCTCCAGCCCCTCCACCCCCGTGGGCTCCCCACAGGGCCTGGCAGGGACATCGCAGTGGCCCCGACCAGGAGCCCCCGGTGCCTTATCGCCCAGCTACGATGGGGGTCTCCATGGCCTGCAGAGCAAGGTGGAGGATCACCTGGATGAGGCCATCCACGTGCTCCGCAGCCATGCTGTGGGCACCGCAGGCGACGTGCACGGGCTGCTACCTGGCCATGGGGCACTGACCTCGGGCTTCGCTGGCCCTGTCATGCCACTGGGTGGGCGGCATGCAGGCCTGGTGGGAAGCGGCCATTCGGAGGACGGCCTTTCTGGCAGCAGTGGCCTCGTGCACAACCATGTGGCCCTCCCCGACCTCTCCCGGCAGCCTGATTCCTACGGCGATCTCGGGCACGGCACTGCCCCAGGCACCACCGACATCAAGCGGGAAGAGCAAGAGGACGAAGAGAACGTGGCAGCTGATACAGCCGAAGATGAGAAGAAGGACCTCAAGGCTCCACGCACCCGGTCCAGCCCAGACGAGGACGAGGACGACCTTCTCCCCCCAGAGCAGAAGGCTGAGCGGGAGAAGGAGCGCCGGGTGGCCAATAACGCACGGGAGCGGCTGCGGGTCCGAGACATCAATGAGGCTTTTAAGGAGCTGGGGCGCATGTGCCAGCTGCACCTCAACAGTGAGAAGCCCCAGACCAAACTGCTCATCCTGCACCAGGCCGTGTCGGTCATCCTGAACCTGGAGCAGCAGGTGCGAGAGCGTAACCTGAACCCTAAAGCGGCCTGCTTGAAGCGCCGGGAAGAGGAGAAGGTATCGGGTGTGGTTGGAGACCCCCAGATGGTGCTGTCGGCTGCCCACCCCGGCCTGGGCGAGGCCCACAACCCTGCCGGGCACCTGTGACAGGAATGTCGCCCGGACAAGTGACCCCACCTCGGTCTTACCTGAGACGGTCACGCCGGACGCCAGATCCCCACCCCACGTCGCCCGAGGTCAACCTCGAGCCAGCATCGCCCCGGGCCCGGCCACCAGGTCTCCTACCGGATGGATCCTGAAACTGCGTCTAGGCCCTGCCGCTCAGGCCCGGGCCCAAAGGAGCATTTTTGTTTGTTTGTTTTTGGCAATAGAACCTGAAACCAGGCAAGAAAGCAAGCCAGAAATACATACTTTGTCAGAAAAGATAAAAAAAGATGCCTTAAGTTAAATGTGAGGTCAAACGTGTTGCTCGCGGGAGGGAGAAGCTGAGCGGAGCCAGCAGCGAGTCGTGCCTAAGCCTGATCGTTTTTTGGTTTTGTTTTTAAGGAACATAAAAGGAACCTTAGTTACGAGATTTTTTTATATATATATAAAACGTAGAAGAAAATTAGGATGTCTTTTTTTTTTAGCTTTTTTGCATATGTTTTGTAAGCAACAAATTTTTTTGTATAAAAGTCTCTTGTCTCTTGCTATTTCTGCTGCTGTTTCTAGAAATTAGCATTGCATTTCATTATCAACAAGGTTATTAAAAATTGTATTAACAAGACCCCAGGACTTCCCTGGCGGTCCAGTGGTTAAAATTCCATGCTCCCAATTCAGGGACATAGGTTCCATCCCTGGTCTGGTAACTGAGATCCCACGTGCAGTGGAGCATGGCAAAAAAAAAGACCTCATGTAGACCTGAGGTCTCCCATCCTCTCTGGGAGCTGCTGGTCCCAGGGGTGGTTGCTGCCATCTTGTTCCGGTTCTAACGTGGCGGGGGCTGTTCTCTAATATCTGCTGTCTGTGAAATGGTGGGTGGGCCTCACCCTGATGGGGAATCTCAGTGGAGACAGGGATGATCCCCGCTCAGAAGGTCAAGGTTCCTCCCCTGTAAGCAGCTCTGTCCCTCCCTCCCAAGGCCAGCCCTACACTGAGCCCCCAGCCTGTGGACCTTTCCAAGATAGGACTTTGTGAGAACCAGCATTCCTGGGCTCAGGGCCTGAACATTTTCATCTATTTGGCCAGGGGACCTGAGGCCCTGCTTCGAACTCTAGCACAAAAACCCCTGCTCCCCAAGTGGTTGTCCTGATGTGTGTGTGGGGGTGGGGTGGGGTGGTGAACAGGGTCCCTGCCTAGAAAGGCCCCTGGTCTGTGTGTCTGCAACCCTGGAGGGTGGGCTGCCCTCAGGCTCTTAAGTGCCAGCTCCCAAGCCTCCCCAGGTACCCTTCTCACCTGTGTTCAAGGGAGCTGATTGAACCTGGACTGCTGGGACCATCCCAGGCTTAAACTGAAAGTCCAAGATGGTCACTCTGTGTCACCTAGGCATGGAGTCAGGCCCAGTGGGATCTCACCTGCCCTCCCTTCTCTCCTGCACAGAGGCCTTATGGACCCCCAGGCTGGCTGTGGGCACCCCACACCACCAGCATCCCAGGCATCTACCCTAAGACTCTCACCCTCATTCCCCAAGCACTGGGGCTGCCTGGCCCCCAAGACTGGAATGCCCCTGTGGCTGGGTGTCCCATGAGAAGCTTGAGGAAACTCCAAGACCAGGATGGGTGGGATATCCCAGCTTGGGGGGCCCCACCTCGACTCCTGGGGTTCCTCTGGGCTCTCCTACCAAGACCAAGTCACACTCCTTGGTGACCCCCCTGGTCTGTGGGTCTTATCTATGGGGAAGCTGCCTCAGTTTCCCTCTGCAGCTCCCTGAGGCCCACAGATTTCTGAACTCTATCACATATATAATTTAAGTTTTATATGTTATATATATATATATAAAATGAGATTAACCCAGCCCTGGGAAAAAGCCTTGAGGGAGGGGGAAGAATCACAGTTACAGGAAAATTGTGCTCTGAGTGCCTCAGGATAACTTGACTTTTTTTTAAATGGAAAAAAAATTTAAGTAAAATAATTTTATACAACTCAACACAGCTGGCTGGATTCTTTTACTAGTGATCCTCTTTAAGAGTCGATTTGGCAACCTGTCCTGTACATAACAGCACTGTAGCAATAAATGACATTTTATGACAATACT EMBV3_28597 GAAGGTCCCAAGCCTCAACTACGAACGCAAGACCAAAGTGGATTTCGATGACTTCCTGCC Gene GeneID:540437|MYO18B:XM_002694616:161_cdna Constitutive 0 NULL GeneID:540437 17 GENE MYO18B NULL myosin XVIIIB EMBV3_08712 CCAAAGGAACCACAAGCACGAAGAGCAGAGGGCACTCTGCCATCTGGAGCTGAAGCAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38756 CTGGTAGAAGCACTCTATGGGATGCCCCACAACAACCAGGAGATTATTCTGAAGAGAGCG Gene GeneID:537712|EBF1:XM_002689346:37_cdna Constitutive 0 NULL GeneID:537712 7 GENE EBF1 NULL early B-cell factor 1 EMBV3_16334 GGAAACAGACAAATCCAAATAAAGTTCACTGTGACAGTGAGGGAGATGAAGAGGAGACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00865 CATCCTCGACTGGAAGCTGTGAGGCTGCAGAAAGGCTTTCAGTCGGATGTTTGCAGCTGC Gene GeneID:791053|MIR30A:NR_030969:7_cdna Constitutive 0 NULL GeneID:791053 9 GENE MIR30A MIRN30A bta-mir-30a microRNA mir-30a EMBV3_09854 CCCAGAGGCGAGATGACAGAGCCAGGCCTAGAGGAGCCGTGGTGTTTTATTTTTCGAATT Gene GeneID:510361|AGFG2:XM_002698208:773_cdna Constitutive 0 NULL GeneID:510361 25 GENE AGFG2 HRBL ArfGAP with FG repeats 2 EMBV3_40016 TGCTCAGGACCTGGGGCTTGCAGGCTACAAATGCAGTGTCTCCACTCAAAGAACAGATCA Gene GeneID:511624|COQ6:NM_001046093:94_cdna Constitutive 0 NULL GeneID:511624 10 GENE COQ6 MGC137363 coenzyme Q6 homolog, monooxygenase (S. cerevisiae) EMBV3_20534 TCAAGTGCTGGAAGCCTCGACCCTTATCCAGTGCCATCTGCCTCATCCAAGAAATAGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24410 GAAGAAGTTGTAGAGATAGATGGAAAACAGGAGAAAGCGTTAGTTCATTGCAGACCACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07595 CACGGCCTGCACGCAGGAAGCTGCCAACCTCTTCCCCATGTCTCACAACGTCCTCTACAT Gene GeneID:616909|TTC7B:XM_002691091:218_cdna Constitutive 0 NULL GeneID:616909 10 GENE TTC7B NULL tetratricopeptide repeat domain 7B EMBV3_20092 CGTACCCCCAGAGGATGCCTATCTGAGTGATGAAGAGTCTGGGAGAGTCCTGAGGAAATT Gene BVT0102_015767 + 0 NULL GK000003.2:114096312-114122458 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174816 TCONS_00174815 1 XLOC_104699 NonCoding TCONS_00174816 XLOC_104699 NonCoding NonCoding - 3:114102730-114105261 - TSS129645 2531 3 TCONS_00174816_4 95 0.787040695377321 1 0 1.0395809187923e-06 0 0 0 0 1.32004207004037e-11 0 0 9.35219032248685e-06 6.09611954264407e-05 0.000158953593497771 8.05527298060003e-06 0 6.75028698257168e-07 0 0.000693340174495518 0.000293498983228692 0.000240400358182943 0 0 0 0.000638017663439817 0.00189334832372 0.000864396567929248 3.04160247591238e-07 0 0 0.00028083038290315 7.45485153330058e-05 4.94582188494578e-05 XM_592211.6 EGFR PREDICTED: Bos taurus epidermal growth factor receptor (EGFR), 4e-169 600 93.91 0.155274595021731 NM_000916.3 OXTR Homo sapiens oxytocin receptor (OXTR), mRNA. 2e-121 441 70.49 0.407348873962861 0 noncoding GCTTACACATTTTACATTGTGCTGCTGCTTTGAATGGGTCTCTCTTCATTATGCCATATTTTTGTTTTGTTTGTTTATAGGAGAGATGATGGTTTTGCCTGTTACTTTTGGGGAAAGAATGACTCTATCTACCGGAATTACAAATCTGGAGGCTTCAGCAGCCTTGCTCCCCGTACCCCCAGAGGATGCCTGTCTGAGTGATGAAGAGTCTGGGAGAGTCCTGAGGAAATTCCTTAAGGCACTGTATCCAGTCGTGACTTTTTAAGCTATCTGAGCCACTGAAACCGTATTTACTTGTTTACTTTCCTTAAGCTAGGTGAGTTATTGTAATAAGGTTGAATTATATGCATTGGCTTACTAAATACTACATACAAGTTAACTGACATCTGATAAAGTCTTGTACCCATAAATCTATAGCATTTAACTACAGAAGATAGACATTGCTGTGTATATTTTACATATGGTATTATGAAGGGTGCATATTTGAACAAATGAAAACTTAAGTTGATACTTTTAAAAATCTTTTTTAAACATCTTTCAGTTCAGTTCACTCAGTCGTGTCCGACTCTTTGTGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCACGTCCATCGAGTTGGTAATGCCATCCAGCAATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTCCAATCCCTCCCAGCATCACAGTCTTTTCCAATGAGTCAACTCTTCACGAAAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCCTCCAAAGAACACCCAGGGCTGATCTCCTTCACAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGCGCTCAGCTTTCTTTAAACATCTTTATTGAGGTATAAATCACATACCGCTAAATGAGCCCATTTAAGTTTTACAAATTTTAAGCTCACACATTCACCAAGTTGTGCGATGGCCATCACAGCCAAGGTTAGGACATTTTCATCACCCCCCAAAAAGAAATCCTGTACACACTGGCAATCACCCCACATTCCCCTCATCCGTGACAACCACCCATCTAATTTTCTGTCTCATTAGATTTGCCTGCTCTGGATATTTCAAATAAGTAGAACCATATCATTCATGGGCCTTTGCATCTGGCTTCTTGCACTTAGTGTAATGCTTTCAAGGATCATCCTTTCTGTAGCAGATGTAAGCACTTCACTCCTTTTCATGGCTGAATAATACTCTGTTGTATGGATAGAGCACATTTTGTTTACTCATCATCGACTGATGAACACTTGAGTTTTTTCCACTTTTTGGCTATCTGAATGATGTTTCTCTGAATATTTACATACAAGCTTTTGTGTGGACATATGTTTTCATTTCTTCTTGGCATATATAATTAAGAGCATAATTGCCAGGTCATAGGTAGCTCCAGATTTAACATTTCAAGGAAATGGCAATCTCTTTTTCAAAAACACTGTACCATTTTGTATTTATACCAGCAATATATCGGAGTTCCAATTTTTCCATACTCTTGTCAATATTTGTTATTATCTGTGTTTTTGATTTCAGCCATCCTTGTGAGTGTGGAGTAATGTCTTGCGGTTTTGATTTGCATTTCCCTAATGGTAATGATCTTGAATATGTTTTCATGTGATTACTTTCCATTTGTATATCTTTCCTTCACCCATTTTTAAATTGGCTTATTTGTCATTGTATTAATGAGTTCTAAGAGTTCTTTATATATTCTAGACACAAGTCCCTTCTCAAGGACTAGATTTGCAAATATTTTCTCTCATTCATTGGGTTGTCTTTTCACTTTCTTGATGGTACTATTTTCAGCACAAAACTTTTTAGCTTTGATAATGTCCAGTTTATCTATTTTTTCTTTCATCACTTTTGCTTTTGGGTGTTATTTCTCAGAAGACTTTGCTCAAGCCAAGATCATGAAGATTTATATTTATGTTTCACTCTAAAATTTGTATAGTTTTACCTTTTATATTTACATATATGGTCCATTTTGAGTTAATTTTTGTGTATGGTATGAGGAAGGGGCCCAACTTCATTCTTTTGTAAGTGGCTATGCAGTCTTCCCAGCATCATTTGTTGCAAGGACTACTCCTTCCCCACTGAATTGTCTTGGCACTCTTGTTGAAAATCAATTGACAGTGAATGTGAGGTCTGTTTCCAGACCCTCGATTCGATTCCATCAACCTGTTACCTGTCCTGATGCCAGGATCGCCCTGTCTTGTTTACTGTAATTCTGCAAGAAGTCTTGAAATTGCAAAATCCGAGTCTTCCAACTTTGTTCGTTTTTAAATCATAACGGTGTTGGCTATTCTATGCCCCTTATATTTCCAGAGGAATTTTAGGATCACCTTGTCAGTCTCTGGGGGTGGGGGCGGGAAGCCAGCTGGGATTATAGTGGGGGTTGTGTTGAATCTATAGATAAATTGGCAAGTGTCACCATCTTA TCONS_00174813 TCONS_00174814 s 5' 6420 TCONS_00174813 TCONS_00174814 s 5' 8950 EMBV3_03932 AGAGCGTGCTTCTCGAGGAGAACTGCCTGTGCCGCTTTCACTGGTGCTGCGTGGTGCAGT Gene GeneID:505075|WNT6:XM_002685575:162_cdna Constitutive 1 NULL GeneID:505075 2 GENE WNT6 NULL wingless-type MMTV integration site family, member 6 EMBV3_19186 GGCTGCCACAGAGTGTGAAATTGTTTGTTGGTTTTAAGCATTCTGTTCATGGCTCCTGAG Gene GeneID:100140212|LOC100140212:XR_084565:373_cdna Constitutive 0 NULL GeneID:100140212 11 PSEUDO LOC100140212 NULL similar to ARL6IP2 EMBV3_38593 AATCTAGAGGGAACACTCCAAAACCCGACTCCAAGTCCAGCAAGACAAGTGCTGCAGTCC Gene BVV0102_458068 - 1 EMBV3_42207 GK000003.2:113266325-113369454 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13293 TGTCATGCTGAAGACAGAGGTCCTGAGACCATGATGCCCACTCAAGCCAAAGCCGCCAGG Gene GeneID:526310|ULK1:XM_002694455:59_cdna Constitutive 0 NULL GeneID:526310 17 GENE ULK1 NULL unc-51-like kinase 1 (C. elegans) EMBV3_23998 ACCTGGAAGCCCTTCATCGGCTACGACTCGCTCCAGCTCCGTGGAGGACGAAGACGAGGA Variant GeneID:338047|DDHD1:NM_176643:21_cdna 749^861 3 EMBV3_03286 GeneID:338047 10 GENE DDHD1 NULL DDHD domain containing 1 EMBV3_25547 ACTATCCGTTACCTCGTGCAGCACAACATGGATTGGGAACTTGCTGGTGCCCAATGACAA Variant GeneID:444988|DHPS:NM_001003657:17_cdna 711^832 1 EMBV3_36368 GeneID:444988 7 GENE DHPS DYS MGC128506 deoxyhypusine synthase EMBV3_01395 GGATTACAGTGGCTGGTATCGTCGTATAGAGAACAATGGCTGGAGGCCTGTTTGTGAGAC Gene GeneID:613764|LOC613764:XM_002692976:43_cdna Constitutive 0 NULL GeneID:613764 15 GENE LOC613764 NULL hypothetical LOC613764 EMBV3_41161 AGCTTTCCCGGGATAAGAAGAAAGACACAGGGATTTAAAGATCCTGTATACCGAGCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28583 ATGCACCTTGTCTTACAAAACATTTACAAGAATTCCTGGCGCGGCTCTTTCTGGACACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01634 GGAAGAAGCAGATGCGCCCTCATGCTGAGAACCGACAGACCTGGCGTGAAGATAAAGTTT Gene GeneID:613425|UROS:XM_002698565:86_cdna Constitutive 1 NULL GeneID:613425 26 GENE UROS MGC139765 UROIIIS uroporphyrinogen III synthase EMBV3_14714 GGAGCAAAGTCTTCTCTACCTGCTCAGCCCACTTGACTGTGGTGATAATATTCTACGGAA Gene GeneID:789817|LOC789817:XM_002689876:5_cdna Constitutive 0 NULL GeneID:789817 8 GENE LOC789817 NULL similar to Olfactory receptor 13C2 (Olfactory receptor OR9-12) EMBV3_28866 GGACGTACCGGGAGAGCAGGGAGGACCGGGGTATCTATTACCCTTATCACTAGAAATGAT Gene GeneID:100337502|LOC100337502:XM_002690019:61_cdna Constitutive 0 NULL GeneID:100337502 9 GENE LOC100337502 NULL rCG25924-like EMBV3_10314 TGATCAGCTCTCCAATACACGCTCAGGGCAGCAGTTGATGTCACTTGATCTAGGGCCCAG Gene BVV0102_115837 + 0 NULL GK000008.2:62452581-62466445 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225591 TCONS_00225592 TCONS_00227905 2 XLOC_137788 XLOC_138360 NonCoding TCONS_00225591 XLOC_137788 NonCoding NonCoding - 8:62462390-62464214 - TSS168855 1539 2 TCONS_00225591_1 121 0.14554905782976 2 0.156884256719693 1.06545566661612e-11 0 0.000199093131759259 4.21460316430253e-05 0 2.0409656923976e-12 1.83279186546808e-11 1.9209037750252e-05 1.024493132287e-05 5.34177736360874e-06 0 0 9.76602075916317e-05 0.000168103470720072 3.18791053612052e-06 0 1.07717484629319e-05 0 9.31015378269327e-06 0.000238302998053615 0.000257392472138497 0.000139821267135799 0.000262274939704095 0 0 0 0.000180832992909599 0 6.30238438479124e-06 0 NM_003028.2 SHB Homo sapiens Src homology 2 domain containing adaptor protein B (SHB), mRNA. 4e-34 150 68.52 0.357374918778428 0 noncoding GCCTCCTCAGGTGCTGACCTGTGAGGGAGGAAGGAGCTCGGGCTGCAGACCCTCCTGGGCCTCCGTGTCTCAGGCTGCGTAAGGACATCATCATGATCATGACAGGGGAACAAACAATGGCAGACTGTATGCCAGTCGTATCCTACCTGCCTCTCCCCGGAACGCAGAAAGTGCAAGGGATGAAGCCCTCAGAGGCCCAGAGACCTCGCCATCTCCTACTATGCAGGCTGTGCTACACTGTGACCCCCCCACCTGTTACCTCTGCTGGGAGTACCAGGCTTTCAGGCTCCCGACTCATCCTCCAAGGCACAACTTTCCTGACCGCTGCAAACAGACTCAATCCCCCCTCATCTGCCCCCACCCCTGGCCCGCCTCTATTGCATCACGTGGAGTTGCCTGTTTTCCTCCACACTGGAAACTTCCTGAGGGCAGGGCTTGGGCTCTGTTCTCCTCTGTAGCCACTAGGCTCAAGGACTCAACAAATGTTTGCTGAACAAATTAATTTGTTTTCACTTAACGAGCTCATTAGGGCTCTAGCTTCCTCCTAATTACGAAGCAGGAAGTTTCCTTTTTTTCCATAACGATCCATCTTTGGGGAATGATGGCAGAACTTCAACTTCGGCAAGAAGAAGGCAATCAAACTAGACCCCTGGCACACGTTTGCATTTGAAAGAAAGAAAACATGCAGGCTCAGTGAGGTACAGTTTAAACAAAACACGTGTATATTAAAAGCTTCACATTAAATATACATTATCATACAGTTCATCACACAGAATTAGATCTTTACAGGACACTTTCAGCAGGAGGGGGTGGTCACAAGGCTCCTGGCAGTGACACAACAGCCCCGAGGAGAAGGGGAGAGACTGGGGGCTGTCCATGCCCAGGGGGTGCCTGAGTGTGTCTCTGTGGGGTTCTGGAAGGTTCTCCTGCATCTGGGCTCTGGGTTGTGCTCGTTCCATTGGACAACTTGCCCCATTTGTCTCTGTCAGTAATCGCTGGTGGAAGGTAAAAGACGTGGCAGCTTGCCGGATGATCATCTGATCCCGCCAGGACCCTTCACGGGCATCGATGGGCCGCTCTAATCGCCAGCCTGCCCTCTCTGCCCGTTTCTGCAGGCACTGTCCTTGGGGTCTGTGAGAGCACATGGGAAGCCTGGCTGTCTGTCCCTGCTGGGCCCTTGATCAAGTGACATCAACTGCTGCCCTGAGCGTGTATTGGAGAGCTGATCAGAGCTCGGTGTTCTGAATCTTAAAAAGGCAATCTCCGGGGCCTGTGACTGCAGAAGCAGAGCATCCACCAAGGGCTCCACCTGTTGTTCCCAGGGCCCTGCTGGAAGTTACGTCAAGATGGCCCTCTGCCTGCCCACCAGAGCTGCTCTGGGAGGGGAGGCACAGCTCAGCTGGGATTGGCCCAGCCTTCAGAAGAGGGGCCTTTTCACCTCTTTCTTTAGAAGCGCTGCTCTGTGAGCCTGTATCCTGACAGGCAGGTGGGCCCTCTCTCCCCACAAAGCCTCCTTTCTTTCTGGGCCGCCATCTTGTT TCONS_00227906 r 3' 2232 TCONS_00227906 r 3' 4055 EMBV3_38185 AAAGGAGGACACGCCCAAAGCACTGTTTCAGCACACAGGTGTCAGTGGCAGGGTTAGATT Gene GeneID:535099|MTMR3:NM_001081605:74_cdna UTR3_Alt 3 NULL GeneID:535099 17 GENE MTMR3 MGC143436 myotubularin related protein 3 EMBV3_16327 CGACAAGAAGAGGAGGCCCCTCACCCTGGCCTCTGGACCTGTGTTCCTCTGTGGCCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04889 ACTGAAAACTGAAGCACTTTAGTGGGAGTTTTAGCTGTTGTTAAGAATGGATGGCAAGTG Gene GeneID:540918|LOC540918:NM_001078029:13_cdna Constitutive 3 NULL GeneID:540918 28 GENE LOC540918 MGC152125 hypothetical protein LOC540918 EMBV3_09288 GGGGACTTATTCTAAGACCCGTGCATGAGGAATGGTGGCCAGTGTTGTTCTAGATCGACA Gene GeneID:618056|SH3BP5:XM_002685183:54_cdna Constitutive 0 NULL GeneID:618056 1 GENE SH3BP5 NULL SH3-domain binding protein 5 (BTK-associated) EMBV3_14792 CAGGGCCTGAAAACTGTGACCTTGAAAAGAACCAGGACTGCAGCAATTAAGTATCTGACT Gene GeneID:514131|BCNT2:NM_001077919:100_cdna UTR3_Alt 2 NULL GeneID:514131 18 GENE BCNT2 P97BCNT2 bucentaur-2 EMBV3_39914 GCTAAGCGCCACCGTAAGGTTCTGCGCGACAACATCCAGGGCATCACTAAACCTGCTATC Gene GeneID:517138|LOC517138:XM_002697528:267_cdna Constitutive 0 NULL GeneID:517138 23 GENE LOC517138 NULL similar to Histone H4 replacement CG3379-PC EMBV3_14120 CTTGAAGTGGTGGAAGAATGAGCAATTCAGAGAAGTGGTTGGGAGCATGGGGGAGGTTGT Gene GeneID:508577|ZMYND17:XM_002698877:491_cdna Constitutive 0 NULL GeneID:508577 28 GENE ZMYND17 NULL zinc finger, MYND-type containing 17 EMBV3_37429 CCCTGTGCTGCCCAGAGACTCTTTCTTCCGAGTGTCTCTACGTGTTCCCCTGCCAGTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17066 GATCTTCAATAAAATCCTGGGCACCACTGTCAAGCTGATGGAGCTGAAGCCGAACACGAG Gene GeneID:617117|FNDC8:NM_001076444:292_cdna Constitutive 0 NULL GeneID:617117 19 GENE FNDC8 MGC134455 fibronectin type III domain containing 8 EMBV3_21391 GCACAGCAGATTATCTCTTTCTATGGTGGAGTTCTTGTCCTGATTCCCTACTACTGGTCC Gene BVV0102_391069 - 1 EMBV3_15116 GK000002.2:126129767-126134945 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42386 TGGAGACAGAGGCACGGCCGCTCCTACAACAATCAAAGCTAGAGATTCCATGGATTTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37855 GGACACCACTGATTTCTTTGGCCGAGTGGTCATCTATCACCTACGTGTGCTAGGGAAGAA Gene GeneID:508684|NR2C2AP:NM_001034327:38_cdna Constitutive 1 NULL GeneID:508684 7 GENE NR2C2AP MGC143175 TRA16 nuclear receptor 2C2-associated protein EMBV3_24285 TTGTATATATGTATAAATGCTGGTGACGGCCAAAGTAGTCTGTTTTGTGAGGATGTCTGC Gene GeneID:530659|LEMD3:XM_002687649:828_cdna Constitutive 3 NULL GeneID:530659 5 GENE LEMD3 NULL LEM domain containing 3 EMBV3_10904 TAATGAGGAACAGTCATACTCCTAGAATAGAGCAGGAAGTACGGTGATGGGTCCTGGGGC Gene BVV0102_018450 + 0 NULL GK000011.2:48238677-48248719 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14933 GTGACACCCCAAAACAGAGACCACCTACCTCTTTGGAGGAAAAGATGTGAAGGCGCCAGA Gene BVT0102_372761 + 0 NULL GK000018.2:46211177-46228137 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21388 AAGCCTGCATCCACTCTTGCATGAATTTCCAGTTCCCGCCTCTCCCACTATCTTCTCCCA Gene GeneID:515621|PIK3R6:NM_001102028:36_cdna Constitutive 0 NULL GeneID:515621 19 GENE PIK3R6 MGC179503 phosphoinositide-3-kinase, regulatory subunit 6 EMBV3_36277 TGAATAAGATTTTCAGTGGTGTCTTTGTGAAGGTGAACGCATCAATGAGCTCATCCGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17803 TTCGTGGACGTGTGGTCCAACAAGAACTGAGTATGGCGGGCTTGACTGGATCATTTCCAT Gene BVV0102_104687 + 0 NULL GK000016.2:31000734-31136170 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29114 TTTAATAAACTGTTAGGCAGGGTCGGGGACGGGGTAGGTATCGGAAAGACATGAACACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17422 GAGACGTGTACACACAACATTAACTGTGAGTTACACACAAATGGTTGACTTCAAAGTGCC Gene GeneID:506509|SEH1L:NM_001103089:53_cdna Constitutive 1 NULL GeneID:506509 24 GENE SEH1L MGC148556 SEH1-like (S. cerevisiae) EMBV3_23175 AGTCCCGCCTAGGGAAGCCAACTGCCCGTCATCCTTTACGATAAACTGCTTCGTTTCTCT Gene GeneID:528204|RHEB:NM_001031764:685_cdna Constitutive 0 NULL GeneID:528204 4 GENE RHEB MGC127981 Ras homolog enriched in brain EMBV3_00830 GTGATGATGCAGATAATGCTGGGGGGAATGTCCGCTGAGACGGGTGCGATTAGACTGTTA Gene GeneID:510038|AQP11:NM_001110069:19_cdna Constitutive 0 NULL GeneID:510038 29 GENE AQP11 MGC142658 aquaporin 11 EMBV3_29309 AAAGCGTCGGCCAGAGATGAGCCGAGGCTTGGGACCAGTGTGTGCCAGGCAGCTGCAATG Variant GeneID:505015|GPR137:NM_001113295:506_cdna 555^780 1 EMBV3_11231 GeneID:505015 29 GENE GPR137 NULL G protein-coupled receptor 137 EMBV3_30322 TCTGCTGCCCTCCTCTTGGTTTCTGGCATGATCTGGGACTGGATCTTTTTGAGGGAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40878 GCTGCATCTACTCGCTCTTCAACGTCATCTCCATCCTCATCAAGCAGGTGCTCAACTGGA Gene GeneID:521931|KCNK12:XM_002691314:443_cdna Constitutive 0 NULL GeneID:521931 11 GENE KCNK12 NULL potassium channel, subfamily K, member 12 EMBV3_06719 CTAATAATCAAACAGTCATGACCACAATAAAAGAACTATTAAGCTGCTCGAGTCTCCTAT Variant GeneID:613474|OBFC2A:NM_001098124:17_cdna 617^805 1 EMBV3_31362 GeneID:613474 2 GENE OBFC2A NULL oligonucleotide/oligosaccharide-binding fold containing 2A EMBV3_22402 TGAATCTGAGGCCTTGGAATTAAGTCAGCGCAAGAAAGAACTGCAGACCCAGGTAATGCC Gene GeneID:782295|LOC782295:XM_002689693:137_cdna Constitutive 0 NULL GeneID:782295 8 GENE LOC782295 NULL hypothetical LOC782295 EMBV3_15924 TGGAGTGGCTGAGAAAGGAGCTGACTGAGATGCAGGACCAAGACCAGAGACTCCTGCTTA Gene GeneID:100296025|LOC100296025:XM_002692276:1616_cdna Constitutive 0 NULL GeneID:100296025 13 GENE LOC100296025 NULL hypothetical protein LOC100296025 EMBV3_24446 GTGGTCGCTGTCTTCCCGGCTCTTGCGCGGGAGCGAACTGATGAATCCATAGAAACCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30894 GCCACATAAGTAATGGGAATAGAAGTGGACACAGTGAAACTTGTGGCCAACATAGCATAC Gene BVT0101_048434 + 0 NULL GK000018.2:7781766-7793105 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08300 GGACTTTGGATATATCATGTCACTCCCTTCTGACCTGCCAGCTATCAGAGAAATCAGCTG Gene BVV0101_068384 - 1 EMBV3_19144 GK000004.2:45475481-45594204 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187173 1 XLOC_113221 NonCoding TCONS_00187173 XLOC_113221 NonCoding NonCoding - 4:45584799-45585768 - TSS139541 969 1 TCONS_00187173_1 76 0.953560371517028 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00027256572877591 0 2.58935960009622e-05 0 0 0 9.95548769743547e-05 0 0 0 0 0 0 5.00991581850327e-06 0 XR_229369.1 LOC100848246 PREDICTED: Bos taurus uncharacterized LOC100848246 (LOC100848246), 3e-46 190 71.06 0.470588235294118 0 noncoding 0 0 0 0 -0.0999299876242494 0.555835849758017 -0.0230948719419999 0.632047903244333 CTTGCCTTTCTAAGTGGGATTTTCCCTTTCCTGTAGATTCTTCTTTTCCACTTAGAGGAGACTCTTTAACATTTCTTTTAGGGTAGGTTTCCTACTGATGAACTGTTTCAGTTTTTGCTTGTCTGAGAAGTTTCTTACCTCTCCTTTGATTCCAGATGCTAATCTTGCTGGATAGAATATTTTAGGTTGCAGACTTTTTCCCTTTCAGGACTTTGGATATATCATGTCACTCCCTTCTGACCTGCCAGCTATCAGAGAAATCAGCTGATAGCCTTTTGGGGATTCTTGTACACAACACTTTTTCTCTTGCGGCCTTTAGAATTCTTTATTTTAAATTTTTATCATTTTAATTGTGATGTCGTCTTTTGAGCGTGGGTTCATTTCGTTTGGGACTCCTGTGTTTCCTGTACCTAGATATGTTTCCTTGTTTAGGCGTTGGAAGCTTTCAGCCATAATTTCAATAACTATATATTCAACCACTTTCTTTCCCTTCTGGGACCCCAATAATGTAAATATTACTGTGTTGTCCCAGAGATCCCTTCAGCCATTCTCATTTTCCATACTGTTTTCATTTTGGCTGTTCTGAGTGATTTCCATTATTCTATTTTCCAGGATCACTTATGCATTCTCTGTATCACCTAATGTGTAGTTAATTCCTTCTAATGTGTTTTTCATCTTAGTTATTGTATTCTTCAGCTCTGTTACTTTTTAAAATGTATTTTATAGTGCCTTGTTAAGATTTTCACTGCATTCTTCTTTTCTTAATCTCTTTGGCATTCTTATTACTAATGCTTTGATATATGGTAAGTTGTATACTTCCGTTTCTTTTTTTCAGGGGCTTTCTCTTGCTCTGTCACCAGAAACAAAGTCCTCTGTATTCTCATTTTGCTTAACTTTCTCTGTATCTATGGAATTAGGTGAAACAGTTACCTATTGTAGTCTTGAAGGAGTGTCCTTGTGTGGGAACAA TCONS_00183833 TCONS_00183834 TCONS_00183835 TCONS_00183836 TCONS_00183837 TCONS_00183838 . 3' 8431 TCONS_00183833 TCONS_00183834 TCONS_00183835 TCONS_00183836 TCONS_00183837 TCONS_00183838 . 3' 9399 EMBV3_28709 GGCACCGTGACAGAACATCTCCAGAGACAGTAAACCGTCAGTCAAACCATTCAGCGTAGT Gene BVT0102_221101 + 0 NULL GK000013.2:63714009-63726541 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049568 1 XLOC_029699 NonCoding TCONS_00049568 XLOC_029699 NonCoding NonCoding - 13:63717381-63718605 - TSS36744 1224 2 TCONS_00049568_1 41 0.160947712418301 1 0 0 0 0 0 4.03364502481217e-06 0 0 0.000101478045156262 0 0 0 2.62918053731582e-05 0 0 0 0.000952518455370238 6.21681364857726e-06 4.09982055949409e-05 0 0 0 0 3.74756252842882e-05 0.000136966097684375 1.8868396202752e-06 0 0 0 0 5.89436090717461e-05 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 1e-64 251 95.54 0.127450980392157 0 noncoding 0 0 0 0 -0.0585277591602691 0.670492895183319 -0.0113879989572209 0.805285120174134 GTTCAAAGCTATTTATTCCGCATACACCAACTCCCCTAAACGTACATTCATAGCTTAAAAAAAAAATCTCCAGACATGAACATCCCATTATTATAAGGAATACATAATTGGGAGAAATGATTCTGTGGGGACTTCATTTTATTAAGAGGCACAGAGACATCCATTGTTGAGTTCTGGCAGAAGGAGGTGGGGAGTTTTATGTCTGCAACATTACATTCGTCTCGAATGATCCCTTGTCACTACGCTGAATGGTTTGACTGACGGTTTACTGTCTCTGGAGATGTTCTGTCACGGTGCCAGTCCTGGCTGTGTCTGAACACAGGCCTCTCACCCATTCGGGAGGCTGTCTCACATAGGAGCAAGCCTTGGGAGTTGGGCAGACCCCTACTGTGTGGCTTGGCCAGATGGGTAAGTGATTTACCCCCATGAAGAGCTCTGATTGCCTCCTTGGTAGAACAAGGGGCAGGGGCTCCTCAACAGAATGGGTGTCCGGGTTCAATGAGAAAACAAGACAAGCAGAGTTTGCAAACTGGCCCGCAGGCCGGATTTAATTTGCTCAGGGTATTCTTCCCCTGAATTATGAATTAGTTTTTAAAACAAATTTTAAATTGGGACATGCTATAGAAAATTTTCACTTTTCACTTTCTTGTATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCGGGGATGGGGGAGCCTGTTGAGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGATTGAAGCGACTTAGCAGCAGCAGCAGCATAGAAAATTTTAAATATTTGGATTTTTAAAAATTTTTGGCTGTGTTGCATGGCTTGCAGGATGTTAATTCCCTGACACCTGGAATCCTAACCATTCGATTACAAGGGAACGCCCAAATGTTTGGCTTTAAAAAAAAGTAATATCTGGCAATGCCAGGTAGGCCATCAGGGTACTGAGCAAGTGCTGTCCCCCATTTAGCCAGAGCCTTGGCCCTCCAGGCAACCAGTGTCCCTGCCTGGCTTGCCTCTCATGATGACCTTATTTGCCCTGCCACTCTGAGTTTGCAATCCCTAATGCCTGTGCCCGGCACTGAGTAAGCATCCAATAAATGTTAACTACTCTTAGGAACATTACTAGAGCACCAGCACAGCTCCTCTTTGCGGAAGACGTGGATGTGGAAGGGAAGGGGAGTGGGTGTTCATGGGGGTGTTCGTGCCA TCONS_00045910 . 5' 3240 TCONS_00045910 . 5' 3240 EMBV3_18877 CCCAGATTTCAGCTTCACAGTTTGGGAGGAAACAAGCCAATCTAGTCAGACGAGTAAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41144 TCACCGTACAAACTCTTCAATGATTGTTAGACTAAAGGAATTTGTTTTTGTGAAAGGTAG Gene GeneID:281969|PDE1A:NM_174414:5_cdna Constitutive 2 NULL GeneID:281969 2 GENE PDE1A PDE1 phosphodiesterase 1A, calmodulin-dependent EMBV3_36174 ACAAAGCTGTCAGGACTGAAAACACACACCTGAAAGGCATGATGGGAGACTTGGACCCTG Gene GeneID:537776|LOC537776:XM_002698993:27_cdna Constitutive 2 NULL GeneID:537776 29 GENE LOC537776 NULL hypothetical LOC537776 EMBV3_30236 ATGGGAACGTCAAGGCTCTGATCTCCATCCACAGCTACTCTCAGATGCTCATGTACCCCT Gene GeneID:511416|CPA5:NM_001077905:164_cdna Constitutive 0 NULL GeneID:511416 4 GENE CPA5 MGC152081 carboxypeptidase A5 EMBV3_36069 CTGTCCCTGAATCACCTTGTCACAATTGGGTCTGTTCCTTTTACTACCACTCTTGAGTCC Gene GeneID:538540|CLINT1:NM_001105417:17_cdna UTR3_Alt 2 NULL GeneID:538540 7 GENE CLINT1 MGC159872 clathrin interactor 1 EMBV3_34254 CAGTGTGACTCTCGACTATCAACCAAAGCTGAGCATCTGAAATGTCTGGTGAACCTGCAG Gene GeneID:785666|LOC785666:XM_002692177:100_cdna UTR3_Alt 2 NULL GeneID:785666 13 GENE LOC785666 NULL similar to Uncharacterized protein C10orf18 homolog (Peripheral benzodiazepine receptor-associated protein 20) EMBV3_15554 GATGACCAAGTACCTAAATCAGATGTCCCATCACCCTCAGGCTAAGAAAGCCAAGCACCG Gene GeneID:100300234|LOC100300234:XM_002694150:546_cdna Constitutive 0 NULL GeneID:100300234 16 GENE LOC100300234 NULL hypothetical protein LOC100300234 EMBV3_32593 ATGAGGAGAGCATCGTAGGGGATGGTGAGACCAAGGAGCCCTTCCTGCTGGTGCAGTACT Gene GeneID:615361|SNN:NM_001113722:267_cdna Constitutive 0 NULL GeneID:615361 25 GENE SNN NULL stannin EMBV3_00563 ATCTCCAGGACTGGTGCTGTTAAGGCCACCCACTACTTTGTGAAGAAAAGTTGCCCGGTC Gene GeneID:784533|LOC784533:XM_002685764:558_cdna Constitutive 0 NULL GeneID:784533 2 GENE LOC784533 NULL similar to uromodulin-like EMBV3_14631 TGCGTGTGTGGGGCTTCCTTGTGCAACAGCTCTGACTTAGTGGAGGTTTCGTGGTTAGAA Gene BVT0102_046095 + 0 NULL GK000006.2:19511164-20080185 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204624 TCONS_00204627 TCONS_00204622 TCONS_00204629 TCONS_00204615 TCONS_00204625 TCONS_00204616 TCONS_00204619 TCONS_00204612 TCONS_00204626 TCONS_00204628 TCONS_00204623 TCONS_00204617 TCONS_00204620 1 XLOC_124489 NonCoding TCONS_00204627 XLOC_124489 NonCoding NonCoding - 6:19773414-19854452 - TSS153041 513 1 TCONS_00204627_1 43 0.233918128654971 2 0.993694238434295 0.000434660525456735 2.31943636600716e-05 0.000396919694245911 9.01470209305051e-62 4.14784350190824e-263 4.80438864208802e-38 6.65901274251396e-48 3.43757050242448e-180 0.000213503484351536 5.22974157201517e-45 0 0 0 0 0 7.80351997851058e-14 0 0 0.00264032195358304 0.00848269190602698 0.00163005189846602 0 0 3.26797305505112e-05 0.0018995339191574 0.000642863482270257 0.00253614499690839 0 0 0 XM_003582128.2 ZC3HAV1 PREDICTED: Bos taurus zinc finger CCCH-type, antiviral 1 (ZC3HAV1), 1e-09 68.0 82.43 0.140350877192982 0 noncoding 1 1 1 1 0.21166733343551 0.335615011880452 0.0360554508746567 0.567512928775267 GCGCAGCAGCAGGAGGTTGGAGAGACACTTAAGTCAAGGGTCTGCGTGGGTTTGCACCCACTGGGACCTCAACCCGAAAGGGCTCCCAACAGGAGTGTGGTGCGTGTGTGGGGCTTCCTTGTGCAACAGCTCTGACTTAGTGGAGGTTTCGTGGTTAGAAACCACCACTTTGCTTAGAAAAGCCGTTGCCATTTTATGGGTAAATCTGTGTGGTCAGCCGCGGCCCTGCTGACAGCTTTTGGAAGCCACCCACACTGGAGGATTCGCAACTTGCCTGCCAGCTACTGTTCCTGTGAATTTGACTTCTCCAGGTACTTGGGATCTTAGATCCTCGACCAGGGATCGAACCCATACCCAACCAGGGATCGAATCCATACCCGCTACACAGGAGGGTAGAATCTTCACCACTGGACCACTAAGGAAGTCTCCCTGAGGCCCCGTTCTTAAACACAATGATATGCTACTTCCTAGTAACACATCAAAATTCATGACTGAATAAATGGAATAAATAGT TCONS_00202634 TCONS_00202637 TCONS_00202639 r 3' 262252 TCONS_00202640 r 5' 236911 EMBV3_20020 CCCTGCTCCACATTGAAAGCAGTGGAAGGAAAGAGATTGGGAGTGAGCCGACCCATGGCT Gene GeneID:516380|TULP3:NM_001098992:28_cdna Constitutive 0 NULL GeneID:516380 5 GENE TULP3 MGC137977 tubby like protein 3 EMBV3_17598 TGGTTCTTGGAGCACAACCCTGTCCCACTCACCCACTCCTGTTTTCCCTCGCACACCCTT Gene GeneID:618096|TMEM151A:NM_001083782:131_cdna Constitutive 0 NULL GeneID:618096 29 GENE TMEM151A C29H6orf137 C6orf137 MGC142913 TMEM151B transmembrane protein 151A EMBV3_28940 GCAAGATCTGTGGGCTCAGTTTCAGTAAACCCTTACCCTTTCAGCGTCACGAGAGAACTC Gene BVT0102_200128 + 0 NULL GK000007.2:14676747-14722357 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215581 TCONS_00215577 TCONS_00215580 TCONS_00215584 TCONS_00215574 TCONS_00215585 TCONS_00215578 TCONS_00215575 TCONS_00215583 TCONS_00215579 TCONS_00215576 TCONS_00215582 1 XLOC_131006 Coding TCONS_00215580 XLOC_131006 Coding Coding LOC100848354 7:14691893-14722186 j TSS160981 2478 1 TCONS_00215580_4 611 9 0.918493331572692 3.13074380672943e-22 1.06359159918542e-14 1.77677233033822e-21 5.4114736719339e-24 2.72089879075385e-19 0 2.20990179430919e-57 1.10367876096963e-17 5.49597580200905e-13 0.00164889709986107 1.35314065123081e-19 0.00056388439117298 0.000830732259251354 0.00323909784520251 1.35766682732204e-07 0.00942510966312545 0.00302579157951991 0.0102187923086321 4.97312755458125e-15 4.20021757357941e-21 7.95524898008012e-44 0.00201666081333835 0.00238971009933811 0.00207278317823994 2.83629453739083e-17 1.69116053685578e-43 1.19070392191783e-23 0.000467213747473973 0.000676207603410066 0.00249613247129003 XM_005208692.1 LOC100848354 PREDICTED: Bos taurus zinc finger protein 135-like (LOC100848354), 0.0 4120 100.00 0.921307506053269 XR_141889.2 BC029127 PREDICTED: Mus musculus cDNA sequence BC029127 (BC029127), 1e-87 329 68.38 0.450363196125908 TCONS_00215580_4 sp|P17039|ZNF30_HUMAN ZNF30_HUMAN Zinc finger protein 30; 1e-169 502 45.78 0.945990180032733 8 coding 0 0 0 1 -0.244380800758529 0.168458679939079 0.457242070121362 0.00580637212081063 ATGCCGGAATTTACTGAATGCAATCGACCCTGGGATCTGCGGATCCGCAATCGGTCGAATCTGCAGTTGCGGAATCCTCAGAATCAGAGTGGTTGGCGTTTGGTCGAATCTGCGATTGCGGAACCCGCAGTTCCGGAACCGCAGATGCGGACCCCTGCAGATGCAGAACTCGCTGAATCCGAGGGCAGGATAAAGCTTGCGGTAACTGAGAAGTACAGCCAGGCCCAAGCCCTTACCTCGCTGACCTGTGGATTTCTGTGTCTTTTGAGCCCTGTCTGGAGTGGATCACAGAAGCAATAAGAGGAGCTTCCAGATTCTCCTGGTTGCTATCTGAGCATACTTACGACTCATAGACTTACAAAATGGCAGCCCCACATCTGTCCACTATATTTGACCCTTCCTGTGCCCATGAAAGGATCACAGAGATGGGAAACTTCCCCTCTTGGTTACAGAACTCAATCACCTTTGAGGATGTGGCCATAAACTTCACCCAGAAGGAGTGGGCATTGCTGAATTCATCTCAGAGAATGCTATACAAAGATGTGATGCTGGAGAACTATAGAAACTTGGCTTCACTGGGACATCAACTCTGCAAACCTCTCATCACCCATCTGGAGCAGGAAGATGAAATGAAGATAGTAGAGCGAAGAATTCACCAAAATACCTGTTCATATGAGATGATTCTCCTTAAAACCAAACGACCACAGCAAGAACAAGGTATTTTGGAGAAATATACACTCAATGGCAAGAAGGAACAAACTCTTGGAGGAAATACCATTCAGTGCAGAGAAATTGTTGAAACCTTGAGTGTGAAATCTAGCATTATTCATAATAAGAGAATTTACCCAGGCAAGAAACTCCATCGATACCCTGACTCTGCAGAAGCCCTTGGTGAATCTTCACATCTTAAGTCACATGAGAGAATTCTTCCTCAGAAAAAATCATACAACTGTGAAACAGATGAAAATTCCTTCATCAGGAGCTCTAACTTAGCCAGCCACAAGAGACAACATACAGGAGAGGGATCCTGTGAATGCAGTGACTGTGGGAAAGTCTTAAATTCAATCTCACATCTTAAGAAGCATGAGACAACTCATATTAGAGAGAAACCTTTTGAGTGTAGTCAGTGTGGTAAAGTATTACAGAGCCATGGGTCCATTAAGTTGCACATGAGAACCCACACTGGAGAAAAACCATTCAAGTGTTATCAGTGCGGGAAATCCTTCAGCTCAAGCTCTTACCTTGCGCGTCACAAGAGAATTCATACTGGAGAGAAGCCCTATGAATGCCATGACTGTGGAAAAACCTTCCGAGATAGCTCACTTCTCAGACAGCATGCAAGGACTCATTCAGGAGAAAAACCCTACAAATGTAATCAATGCAACAAAACCTTCAGTAGAAACGATAGGCTTACCACACACCAGATAACACATACTGGAGAGAAACCCTATAAGTGCAATGATTGTGGAAGAACCTTTAGTGTTCTCCTATACTTCAAACAACATAAGAGAATCCACACTGGAGAGATAGTCACTGAATGTAGCCTCTGTGGTAAAGCCCTAAAGAGTAAGGCATCTCTAAAGACACACATGAGGATACATACTGGAGAGAAACCTTACAAGTGTAATCAATGTGGGAAAGCTTTTAGGATGAGCTCCAACCTTACCACACATAAGAAAATTCATACAGGAGAGAAACCCTGTAAGTGCAATGACTGTGGGAAAGCCTTCAGGGATCGCTCATGCCTTAAAGAACATGTGAGAATTCACACTGGAGAAAAACCCTTTACATGTAATCAGTGTGGAAGAGCCTTCAGAGTGAAATCTTTCCTCATGTTACATAAGAAAATTCACATGAAAATGAAGTATGAATGTAAGGAATGTGGGAAAACCTTCCGTGGTCTCTTATCTCATGGGAGGCATATGAAAATCCATACCAGAGGCAAGAAACCTTTTAAGTGCAGTGAATGTGGAAAAGCTTTTAGCAGGCATGTTTCCCTTACAGTACACATAAGAACTCATACAGGGGAGAAACCCTATGAGTGTAATCAATGTGGAAAATCCTTCAGTGTAAAATGTAATCTCACTGTGCACAAAAGAATACATACTGGAGAAAAACTCTATAATTGCAAGATCTGTGGGCTCAGTTTCAGTAAACCCTTACCCTTTCAGCGTCACGAGAGAACTCATGCTCAATAAGTCCCTTTTGATGACATCCATGTAAAGTAGCTTTCAGGGAACTCTCAATCTTTAAGACATGCAACAGAACGCTAAGTGGAAAGAACTGGTTTTGAATAATGTGAGAAAGCCTCTGAATAATGCATATATGGGAGAAGCCTAAGTTATGCAATGATTGTGAGAATTTTTTTATTCATTCATTATCCCTTAGAGAATATGTAGTAATGCTGAAAGATAATGTTTTAATATCTTCAAGACTTGTCACTTGAGAAAAATAAAAACCTAATGTTTTAAGCCACCA EMBV3_04305 CAGCTCTAGGTTTCCACTGCGTCTCTCCAGGCCACCAAGAGGCTTTCTAACTGAATCTCT Gene BVT0102_104897 + 0 NULL GK000015.2:25556398-26101332 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058622 1 XLOC_036150 NonCoding TCONS_00058622 XLOC_036150 NonCoding NonCoding - 15:26087412-26090665 - TSS44124 2472 4 TCONS_00058622_8 79 0.0970873786407767 3 0.240774907749078 0.000188924169195753 2.38201315621176e-154 1.25858472712919e-55 1.71293031970008e-08 1.79739418776128e-05 1.15215584565806e-30 1.35629520850503e-12 3.3061497960484e-09 7.54095617747876e-05 2.78934413769644e-61 3.02957370609385e-116 4.37099023201498e-120 5.92082797059776e-55 1.43769697836901e-12 1.64007041112489e-05 0 0 0 4.71612535952189e-14 1.49294786961785e-08 5.2118726781835e-06 7.36725771271381e-30 0 0 1.97753081877233e-26 4.94717041456097e-05 1.77034899152359e-14 0 0 1.76196136718159e-22 0 noncoding 0 0 0 0 0.0317323808525252 0.851376759019434 0.0292896583575054 0.549018866490653 AGCATCTGAGAGCCACTAGCCGGTGGTGTGCTGCCTGGTGGTGGGCAGCAAGGTGCCCTTCTCTCCTGAGCTTGGCTCAGGAGTCCTGGCTGGGGGAGGGGGGTGAACAGCACAACCTCTGGGGAGCTGCTATTGGGTCCTTGTCTGTGAGGCTGCCTGCTACCCTGGTGTCTAAAGCGAGGGGGTTCAGCCCAGGAGCTCTGAGGCATTCTGTAGATCTGACATTCAGCAATCTGTGATTGGATGAACTCAACCAGAGCCACAGGCCCATATGAGTCTCTTCCTAGGTGGGCAGTGGTACAAATGGAAACCTGCGTAACAGCCGGTGCCCAGGGAAGTCACGGAGCTGTGGAGTAGTCAGTGACTCCAGGACCAGAGTCGGGTGTGACCCCACTGCTGCGAAAGGCACTAATAGCCTGCTGTGGAGACAATACAAACGTTCGAAACCATGAGAAGAAAATGTGACTGTCCAAGGGAGCGGCCAGGACTCAGATGGAGCAGAGCCTGTATAACTGGGCCCCTCTGCATTCTGGCAGCTCTAGGTTTCCACTGCGTCTCTCCAGGCCACCAAGAGGCTTTCTAACTGAATCTCTTCTAAGAGGGCTGGGTGTCTGCGCTGGGAGCTGCGGGGAGAATACAATCCGCAAGGTCAGGGAGAAGCAGAGCCGGAAGCAGCGATGCTGTGTGTGACTTTAAGGATGGATAACAAAGGAGATAGTGCGGAGAGGCGCAGTCAAGGGCAGACAAGGCTTTCTAGGGGCCCCCTCCCCCATCAAACTGTTAACACGAAATACAAAGCTCAAGTCTTTATTACAAAAAAAAAAAGAAAAGCAAAAGGTAGCAGCAGCTGAAGAGTGCAAGCCAGAAAGAGGGGAGAGCCACAGTGAAATCAATACTGGCCAGGACAAGCATTATCCCATGTGGAACACCTCAAGCCTCTGCCTAGAAAATTTGATTGGATCTTCAGAAAAACCTATTAGTGTGTTGTCAGGACCTTCTGGTGATAACTGACCAGCTCTCTCCAATCGATGCTCTTCACTTGTGAAGCTCCTGATTTTTTAACAGCATAATTGTTTTTTTAATAACCGGCTGGCTCACCCACTCCAGCAAGCGGGGAGTCAAAGTCAGACTCCCAACTTAAAATATAGAGAAACGTGATGCCCCAGCCACTTCTTCCTAATTGCACAATTACTTTATGGAGCACGGGGGGACTGAAGGCGGGAGGGTGAGGCTTTTTTTTTTTTCGGCTAAGCCAAGTTGTTAAGAAAAGTCACAGAAGTAATTACACAAGTCAAAATTATTTACTAAATGAAATCCATTCTTCGCAAAGGAACCTTTATTTATTTTTAAAGAAAAACGGCCAAAAGGGGGATGGTTTCAGCATGGCAAGAATACCATAAAGCAACAGTAGAATCAGTCATCAATTATTACAGCATTTTCATTTTCAACTCAAGAACCGATAACACATTTTACTGGGGATTTTAAATACACTGTAACGACAGCAGTATTTTTTTTTTTTTTTTTTTTTTTGCCGTGCTTTGGATCTGAGATGTCAAAGTACTTCACAAACAAATAACTGGAAACAGTTTGGGGTGAAGGCTCTTTATAACTGAGAGCAGGGCCCACAGAGGAAGCGATTCGCCCAAGGTCATGGGCTGAATCGGAGGGACAGCTGGAAAGAGCAGGCATGAATACTGGCTCCCACAGTCAGAGCTCATCACCACTAGTCTGCGCCTTCCCACACATGCCAAAACAAGCCCCCAAAGTCGGGAGACAGCAGCAGACCAGAGAAGTCACGTGCCCTCCAATGCCTAAGTTGTCCATGCTGACAATTTGCTGTACAGAATGGAAGCTGGGTGTGCAGGTCAGAGGTCTTTACAGACTGCTGTTGGGCTAAAACCAGGAAAAGCAGTTGCTAGTGAAAATGTAGAGGGTTCTATGCTTGTTTGGGGCAGCCTGGCTTTCCACCTGAGCTCCTGAGTGTATTCATCAGATTCTTCAAGGTGTCAGCCTTCCAGGAGGGCCTGATGGCTCACACAACAGTTGTTCTCAGCCCACCTGGCAGGTCTCACCTTTCTCTGGTTGGTTCCCTCCAGAGCCTGGTCTGTGTACCCAGGGTTGGCAGGGGAGATTCAGAGGAGGAGGGGAGACAGAGCATGGGAGAGGGTGAAAGAGAGAGAGGAAAAGAAGAAAGTGGAAAAGAAAAAATAAAAATAGAGAGGTGGGCCCGTTTTAAAACATTTGCAGGCCCTAGGACCTCTTTGTAAGGAGGCTTTGTCCCACAAATATATTACAATCCCACACTGAATACAATTTATTCATGATTATTTACCAGTTGAGTTTGGTTGAAGTTTGCTGGCTGATAATGTTATGGCTTTGTAGATATTTAATTAAACACTTCATAATTTTGATTTTACACTTTGCTTCTCTGCCTTTTAGAGCTCATATTTTTTTCTTTCCAGGCCCTTGAAA TCONS_00060761 TCONS_00060762 TCONS_00060763 TCONS_00060764 TCONS_00060765 TCONS_00060766 TCONS_00060767 TCONS_00060768 TCONS_00060769 TCONS_00060770 TCONS_00060771 TCONS_00060772 TCONS_00060773 TCONS_00060774 TCONS_00060775 r 3' 7835 TCONS_00060761 TCONS_00060762 TCONS_00060763 TCONS_00060764 TCONS_00060765 TCONS_00060766 TCONS_00060767 TCONS_00060768 TCONS_00060769 TCONS_00060770 TCONS_00060771 TCONS_00060772 TCONS_00060773 TCONS_00060774 TCONS_00060775 r 3' 11087 EMBV3_41676 TGCCAAGAAAGGGGAGAGAGAGTGCCACATTGTCGTGCTGACGGATGAGGATTCTGTGGA Gene GeneID:514967|KCTD20:NM_001101093:32_cdna UTR3_Alt 2 NULL GeneID:514967 23 GENE KCTD20 NULL potassium channel tetramerisation domain containing 20 EMBV3_34988 TGCATTGCAGGCGGATTCTTTACTACTGAGCTATCGGGAAAGCCCTATCTCAATTGTATC Gene BVV0101_027465 + 0 NULL GK000020.2:60935361-61497050 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22442 GACCTGCTCCAACCCCTCAAAATGATGAAATCCGTGCAGTTGGCAGGCTAAAAGGAGAAC Gene GeneID:784769|LOC784769:XR_083673:141_cdna Constitutive 0 NULL GeneID:784769 5 PSEUDO LOC784769 NULL similar to MGC127725 protein EMBV3_22307 GTGATTGTGAAGACGCCTTGCCCCGTGGTGGATGATGTCAAAGCTCAAGAAATAGCAGAC Gene GeneID:536162|ASTN1:XM_002694101:386_cdna Constitutive 0 NULL GeneID:536162 16 GENE ASTN1 NULL astrotactin 1 EMBV3_08784 TGTGATAGCACAGGGTAGCCTAGGCAGTGGATGAATACCTCAGAAGTCCTCTTGCAGCAA Gene BVT0101_006266 + 0 NULL GK000021.2:34452117-34476932 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36593 CCTCTCCCCCCACCTCTCCGTGTTCCTACCCATCATGAACCCTGTACATTTGCCATTTTA Gene GeneID:510932|SLC29A1:NM_001034398:258_cdna Constitutive 0 NULL GeneID:510932 23 GENE SLC29A1 MGC127490 solute carrier family 29 (nucleoside transporters), member 1 EMBV3_34192 GGCCTGATGGAGAGAAGAAGGCATATGTTCGACTGGCTCCTGACTATGATGCTTTGGATG Gene GeneID:100337029|LOC100337029:XM_002697218:131_cdna Constitutive 0 NULL GeneID:100337029 23 GENE LOC100337029 NULL ribosomal protein L23a-like EMBV3_39436 CTCATCGCTCACCACTGAGGGCGGGGCAAAAAAGGTAGTATGGTTCGTGTATTATTTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27577 AGGATGACCGGGTGGCTAAAAGAGTGCCTGAGTGGAGACGCGACCGAAGTGAAGCCCTTT Gene BVT0102_178667 - 0 NULL GK000019.2:35041294-35047308 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096495 1 XLOC_057984 Coding TCONS_00096495 XLOC_057984 NonCoding Coding - 19:35041650-35043083 - TSS71692 1433 1 TCONS_00096495_4 210 1 0 0.000208880194304814 2.80486038363878e-05 0.000231949746361381 0 7.45487409786368e-05 1.74734300378797e-05 2.44339773108353e-05 7.01675496921103e-05 3.303609922222e-05 5.74249249288123e-06 0 0 3.53784132439418e-05 3.28261853134933e-06 1.71186197230791e-06 0 0 0 4.01775109703435e-05 0.000281033113667998 7.58700071199762e-05 0 0 0 0.000207902577317027 9.83316424141798e-06 0.000110395784577876 0 0 2.47242984965758e-207 NM_017758.3 ALKBH5 Homo sapiens alkB, alkylation repair homolog 5 (E. coli) (ALKBH5), 4e-71 273 80.79 0.207257501744592 0 noncoding 0 0 0 0 0.0188100411461911 0.887295503599717 -0.00479448618580372 0.917739194479643 AGTCCCAGGTGTCCAGGCCTTCCCATCCCACTGGCCCTGCTGGCCTGGCCTTGCCAAGTTACCCCACGACAGGCCCCACTTCACAGCAGAGACCGTTAGGCCCTCAGTTTAGGACGTGGAAACAGGCCCCCAATGGAGGCCAGTGGTCCTCTCTGCTTAATGGACAGGATATGGGACTGCATCTCAGCCGCGCACCCACCGCACGTGTGGGCACTGATGTCATTCCCGCCTCCAGAGCTTGTCGGGGTCCTAAGCCGGAGGTAAAGGTCCAAAAACACGCCTGCCGGGTCGCAGGGTCCGGAGCTCAGGCCCTGACCAGAGGGGACGGTGGGTGGAGAGGGCGCAGGGACAATGGGGCGGGCGCACAACGGTCGGAAAGGAGAGACTACGAAAAAAAAAAAAAAAGAAAGGAGAGACTACGAAACCCAAGATGCATTTCATTCCAGAGAAAATCTGGGGATGCTGCTAGAGGAGTGAACCAAGCCTCCAAAAACTACAATGAAGGCGCGGGTGGGAGGGACTGGGCCCAGGAGCGTGACCACGCGAGTAGGCCTGCGGGTCTGGCGGGGCCTGGAGGGTCTGAACAAAGGGCTAGGCGCCCGGTAGAGCCCCGACTCCCGGGTCCGAGGTCCGTGCTCCAGTCCCGTCTCCCCGCCATCCCTGGGGCACCCTGCCCAGGAGGGCCGCGCACGCGCCGCCGCCTGGACGTGACTCGGGCAACGTCCACGCGGAGAGGCGGCGGGGGTGGGGGTGGCATCTGCGGCGGCGGCCGTCGGACAAGGGCACTCGGCCGGAGCTCTTGACCCAGCAATCCGAGTGTTCCCTTGCGCGCAAAGGGCTTCACTTCGGTCGCGTCTCCACTCAGGCACTCTTTTAGCCACCCGGTCATCCTTCAGGGGTCCTTGCATCCCGCTCGCGGCTAATTAGGGGGATGGACGCAGTAGCCAAGGCGACCGTCGGATGGACAGGCACGCGCGCCAACCGACTTCCGGAAGCTGCCGTCTGGTCCCGCCCGGCCCGTGGCGGGTGGCCCAATGACAGAATCAGAAGCGCCAAAGGGGCGGTGCCCGGGCAGCCTTGCTTGTGGCGGTTCCCCGGTGATTGCGCGCTGGGGTTTGAGGCGTTTTTGGTCGTTCGGACGATGCCGTGACGCAGCGCGGCGACAGCGTTGGTGGCGTGAGCGCATTCCTGTGGAGGGAGCCCTTCGGCCGCGTGGGTGGCGCGGCGAGGAGGCAGGCTGCTGTTTGGGGCGTTCGCGGACCCCTTCAGTGGGTGGGGGAGGGGCCGCGGACGGCAAGCGGCTTTCGTCTGCGCGTGCGCCTACCTCTCCGCTGACCCGGCCGCACGCACGCGCATGCTCTGTGCGCGCGGAGCCGCGGTGGCCGGCTGTACTGCGCGTGCGCTCGGAGCAGTCCGCTGAGGAGCGGCGCTGG TCONS_00096494 s 5' 0 TCONS_00096494 s 5' 0 EMBV3_09181 CAGCTCCAGACATCAGGTTTCCCAGCAGACTTTAGGCCAAGCTGTTAGGGGGAAGAAGAA Gene GeneID:539019|CNN2:NM_001035420:86_cdna Constitutive 0 NULL GeneID:539019 7 GENE CNN2 MGC127599 calponin 2 EMBV3_19748 ATGGCCAAGAACAAACTAAGAGGGCAGAAGTCCAGGAATGTATTCCACATAGCCAGCCAA Gene GeneID:783382|LOC783382:XM_002686674:68_cdna Constitutive 0 NULL GeneID:783382 4 GENE LOC783382 NULL similar to MGC133577 protein EMBV3_30565 CAGGACTGCAGGAATATGTGGAGGCTGTCTCTTTTCAACACTTCATCAAAACACGATCAC Gene GeneID:533927|TSNAX:NM_001076006:87_cdna UTR3_Alt 3 NULL GeneID:533927 28 GENE TSNAX MGC142669 translin-associated factor X EMBV3_31890 CAACAGAACCATATCGGGAGTGTGATTAAGGGTACCCCTTGTGCTGAGCAAATTAAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09081 AACGGGGACTGACTAACCACAGTGTCTACTATCCGTGTGAATGCAGTCAACCCCACGGTG Variant GeneID:526937|DCXR:NM_001075891:108_cdna 503^567 2 EMBV3_01532 GeneID:526937 19 GENE DCXR NULL dicarbonyl/L-xylulose reductase EMBV3_43628 AGAGCACCCTGCTGCTGAATAACGAAGGATCTCTGTTGGCCTACTCCGGCTATGGGGATA Gene GeneID:616375|ROBLD3:NM_001034791:224_cdna Constitutive 2 NULL GeneID:616375 3 GENE ROBLD3 MAPBPIP MGC127161 roadblock domain containing 3 EMBV3_16199 GGGCCAAGCGGCTGTCCGTGGAGGGCGCACCTAATGCGCAGTGATTGTCTGGAAAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42435 CTCTGAGTTCAACAAGTTCAGAAAACTGGAGAAATGTGGCCGAAGAAGAGGCAGGTGGGG Gene GeneID:516507|LRRC66:XM_002688269:11_cdna Constitutive 0 NULL GeneID:516507 6 GENE LRRC66 NULL leucine rich repeat containing 66 EMBV3_37779 TGTGGTGAACCAGGATGAAAAGTCCTTCGCCATCGGAGTGCAGTTCTTGCTGATGCGTCT Gene GeneID:282468|SLCO2A1:NM_174829:13_cdna Constitutive 1 NULL GeneID:282468 1 GENE SLCO2A1 SLC21A2 solute carrier organic anion transporter family, member 2A1 EMBV3_02815 TGTAGTGGTTTCCGGGGGGTCGTCTAGGCCTCACACTTCACTGCTTTAACCCTTAGTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16393 ATAATACACTGCCTTGCTGCTGCCATTTCTACTTCTTGATCTGCTGGGAAGGGTGGCTGC Gene GeneID:514003|CDC40:NM_001075643:26_cdna UTR3_Alt 2 NULL GeneID:514003 9 GENE CDC40 MGC140426 cell division cycle 40 homolog (S. cerevisiae) EMBV3_43427 GGGCCGCCCCCAGCGGCGGGGCTGCCTGGACATTTAAGTGAGTGGTACTGCAGGAAGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37444 CCTTTGATGTTGAGGGTGCAGGTGGAAGAAAGATGGAAGAAATCTACATGCTGTGCTCAC Gene BVV0101_016693 - 1 EMBV3_39397 GK000012.2:82276356-82844294 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31421 CTCATGGATGGGGACTTAGCTATTGGAAAGGTCCTGCCAGGTGCGGACTCTGATGACTTC Variant GeneID:513010|CREB3L3:NM_001034432:24_cdna 130^258 1 EMBV3_40569 GeneID:513010 7 GENE CREB3L3 MGC127249 cAMP responsive element binding protein 3-like 3 EMBV3_00907 CCCTTTGCGTGCCCTGAGTGTGGGAAATTTTTCAGCCATAAGTCAACCCTATCTCAACAC Gene GeneID:100335403|LOC100335403:XM_002698816:14_cdna Constitutive 0 NULL GeneID:100335403 28 GENE LOC100335403 NULL zinc finger protein 347-like EMBV3_19511 GTCCGACGTGGACCAGCGCTGCCTGGACAGGCCTATGCCATCAATGGGAAGATTTCTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02718 AAATATATTGATCAGAAGTTTGTATTGCAGATTTATTTATGAAACAGAGCATCACAATGG Variant GeneID:505757|PPP2R5C:NM_001083376:175_cdna 518^648 1 EMBV3_28749 GeneID:505757 21 GENE PPP2R5C MGC143298 protein phosphatase 2, regulatory subunit B', gamma isoform EMBV3_23795 TCCCGGGTTGGGGCCGTGGCCGTGGCCTTGCCTAAAGCAGGACATCCAAAATGAGAAGAC Variant GeneID:533508|ODF2L:NM_001075993:62_cdna 85^253 1 EMBV3_35554 GeneID:533508 3 GENE ODF2L MGC143236 outer dense fiber of sperm tails 2-like EMBV3_37657 GGAGGAGATGCTCACTTCGATGAGGATGAACGCTGGACTGATGGTATCGGGATAGGAGTT Gene GeneID:286794|MMP7:NM_001075130:8_cdna Constitutive 0 NULL GeneID:286794 15 GENE MMP7 NULL matrix metallopeptidase 7 (matrilysin, uterine) EMBV3_36995 AAAAGTGCTCCACCCCGGTCTACCCCTGGATGCAGCGGATGAATTCATGCAACAACATGA Gene GeneID:100337380|LOC100337380:XM_002695943:372_cdna Constitutive 0 NULL GeneID:100337380 19 GENE LOC100337380 NULL homeobox B6-like EMBV3_34239 CTTGTCACTTTATTGTACACTTGAAACTAATATAATATTTTTAACCAACTATACTTCAGT Gene GeneID:505854|C28H10orf57:NM_001075228:281_cdna Constitutive 1 NULL GeneID:505854 28 GENE C28H10orf57 C10orf57 MGC140183 transmembrane protein C10orf57 homolog EMBV3_27861 CGCTGAGACAGGTGTGGAGGTCCTAGGCAGGGACAATGAAGCCTTTGAGGTGCCAACCTA Variant GeneID:515372|TMEM139:NM_001143872:664_cdna 194^443 1 EMBV3_25507 GeneID:515372 4 GENE TMEM139 NULL transmembrane protein 139 EMBV3_32097 CCTCACAGTGGTGGTGATTTACTATGGGACTATCTCCTTCATGTATTTCAAGCCCAAGGC Gene GeneID:784922|LOC784922:XM_002683961:5_cdna Constitutive 0 NULL GeneID:784922 Un GENE LOC784922 NULL similar to olfactory receptor Olr833 EMBV3_14466 TTTAAATACGGAGACCTCCTGGGACACTTGGAGGCATGTTTAACAGAATGGCAAAGTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21489 AACACAGACCAGCTGTCTGACCATGGGGACCTGCTGTCTGAGGAAGAGCTGGATGAGTGA Gene GeneID:526125|GON4L:XM_002685974:289_cdna Constitutive 0 NULL GeneID:526125 3 GENE GON4L NULL gon-4-like (C. elegans) EMBV3_23994 AGTTTTGAAATTATTGAAAGCCTCACTGATGGAGCCAAACAAAACCAGCTTGGTCACGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12986 CCTGGATGCGCTGGAGAACCTGACAGCGGACGAGTTCAAAAAGTTCAAGATGAAGCTGCT Gene GeneID:282846|PYCARD:NM_174730:230_cdna Constitutive 0 NULL GeneID:282846 25 GENE PYCARD ASC PYD and CARD domain containing EMBV3_09059 GAAAAAACAGTCACATCTCTTGGAGTCGTGCACACAGCAAAACGCGTTCAATCAGCAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37742 AGTCTCCTCTGGAGCTTTTTCACACACCCGGGAACCCAGCTCAAGGAAGCAATCAGACAT Gene BVV0102_031300 + 1 EMBV3_15046 GK000023.2:17901665-17978580 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28063 ATCTTCGAGCGGGACGCCATCGATATCATCTCAGACCTGGAGTCTTGGAACGATGAGCTT Gene BVV0102_094227 + 0 NULL GK000020.2:58777985-59294069 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115195 TCONS_00115188 TCONS_00115189 TCONS_00115187 TCONS_00115196 TCONS_00115191 TCONS_00115190 TCONS_00115186 1 XLOC_069467 Coding TCONS_00115186 XLOC_069467 Coding Coding TRIO 20:58712574-58880503 j TSS85735 8481 1 TCONS_00115186_5 1598 46 0.949770139583631 0.0012020154373536 4.74219907612391e-22 0.0008677339273297 0.00029196506103756 0.00093428561071189 0.000237355566866675 0.000209011206865532 9.82359887106285e-05 0.000312003268387593 7.19302829071119e-10 3.54447110993534e-06 1.54853786208056e-12 4.88488487042016e-10 0.000448038268436299 0.000206590288604607 0.000921887382279544 0.000225605631311723 0.00045468447178251 0.000705283759601938 0.00180445423782221 0.00031989494212034 1.82259048007187e-09 6.62853117893186e-05 0.000539968600769458 0.000627779143135882 0.00143371547934576 0.00125373790546944 2.52389532993389e-09 3.46643013922716e-15 2.00571114894934e-09 NM_001102212.1 TRIO Bos taurus triple functional domain (PTPRF interacting) (TRIO), 0.0 3582 100.00 0.234052588138191 NM_007118.2 TRIO Homo sapiens trio Rho guanine nucleotide exchange factor (TRIO), 0.0 6673 89.66 0.582714302558661 TCONS_00115186_5 sp|O75962|TRIO_HUMAN TRIO_HUMAN Triple functional domain protein; 0.0 3162 98.26 0.99874843554443 5 coding 1 1 1 1 -0.105156231704243 0.5090428709318 -0.0674235810204996 0.352865182324245 GTACACCAATGCAGATAAGTTACTTGAGGCAGCCGAGCAGCTGGCCCAGACGGGAGAATGTGACCCGGAAGAGATCTATCAGGCTGCCCATCAGCTCGAGGACCGGATACAGGATTTTGTGCGGCGCGTGGAGCAGCGGAAGATCCTCCTGGACATGTCGGTGTCTTTTCACACGCATGTGAAAGAGGAGCTGCTGGACGACGTGTACGCCGAGTCCGTGGAGGCCGTGCAGGACCTCAGCAAGCGCTTCGGCCAGCAGCAGCAGACCACCCTGCAGGTGACTGTGAACGTCATCAAGGAAGGCGAGGACCTGATCCAGCAGCTGAGGGACTCAGCCATCTCCAGCAACAAGACGCCGCACAACAGCTCCATCAGCCACATCGAAACGGTGCTGCAGCAGCTGGACGAGGCCCAGGCGCAGATGGAGGAGCTCTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCCTGCAGCTGCGCATCTTCGAGCGGGACGCCATCGATATCATCTCAGACCTGGAGTCTTGGAACGATGAGCTTTCTCAGCAGATGAACGACTTCGACACGGAGGACCTCACGATCGCGGAGCAGCGCCTGCAGCACCACGCGGACAAGGCCCTGACCATGAACAACCTGACCTTCGACGTCATCCACCAGGGGCAGGACCTGCTGCAGTACGTCAACGAGGTGCAGGCCTCCGGTGTGGAGCTGCTTTGCGACAGAGATGTGGACATGGCCACGCGGGTCCAGGACCTCCTGGAGTTTCTGCACGAGAAGCAGCAGGAACTGGACCTCGCAGCTGAGCAGCACCGGAAGCACCTGGAGCAGTGCGTGCAGCTGCGCCACCTGCAGGCCGAGGTCAAGCAGGTGCTGGGCTGGATCCGCAATGGAGAGTCCATGCTGAACGCCGGGCTCATCGCGGCCAGCTCGCTGCAGGAGGCAGAGCAGCTGCAGAGGGAGCACGAGCAGTTCCAGCACGCCATCGAGAAGACACACCAGAGCGCCCTGCAGGTCCAGCAGAAGGCCGAGGCCATGCTGCAGGCCAATCACTACGACATGGACATGATCCGGGACTGTGCCGAGAAGGTCGCCTCACACTGGCAGCAGCTCATGCTCAAGATGGAAGACCGGCTGAAGCTGGTGAACGCGTCCGTGGCCTTCTACAAGACCTCAGAGCAGGTCTGCAGCGTCCTGGAGAGCCTGGAGCAGGAGTACAAGAGGGAAGAGGACTGGTGCGGAGGGGCCGACAAGCTGGGCCCCAACTCCGAGACGGACCACGTCACCCCCATGATCAGCAAGCACCTCGAACAGAAGGAAGCATTCCTGAAGGCTTGCACGCTTGCCAGGAGGAACGCGGACGTCTTCCTGAAGTACCTGCACAGGAACAGCGTGAACATGCCAGGCATGGTGACGCACATCAAGGCCCCCGAGCAGCAAGTGAAAAATATCTTGAACGAGCTCTTCCAGCGGGAGAACAGGGTGCTGCACTACTGGACCATGAGGAAGCGGCGGCTGGACCAGTGCCAGCAGTTCGTGGTCTTCGAGCGAAGCGCCAAGCAGGCTCTGGAGTGGATCCACGACAGCGGGGAGTTCTACCTCTCCACCCACACGTCCACGGGCTCAAGCATCCAGCACACCCAGGAGCTGCTGAAGGAGCATGAGGACTTCCAGATCACCGCCAAGCAAACCAAAGAGAGAGTGAAGCTATTGATACAGCTGGCCGACGGCTTTTGTGAAAAGGGGCATGCCCATGCGGCAGAAATAAAAAAATGTGTCACTGCCGTGGATAAGAGGTACAGAGACTTCTCTCTGCGGATGGAGAAATACAGGACCTCTTTGGAGAAAGCCCTAGGGATTTCTTCAGATTCCAACAAATCGAGCAAAAGTCTTCAGCTGGATATTGTTCCGGCCAGTATCCCCGGCTCAGAGGTGAAACTCCGAGACGCCGCCCATGAACTTAATGAGGAAAAGCGGAAATCTGCCCGCAGGAAAGAGTTCATAATGGCTGAGCTAATTCAAACTGAAAAGGCTTACGTAAGAGACCTCCGGGAGTGTATGGATACCTACCTGTGGGAAATGACCAGCGGCGTGGAGGAGATCCCCCCGGGCATTGTAAACAAAGAGCTCATCATCTTCGGGAACATGCAGGAAATCTACGAGTTTCACAATAACATATTCCTAAAAGAGCTGGAAAAATATGAGCAGTTGCCGGAGGACGTGGGACATTGCTTTGTAACCTGGGCAGACAAGTTTCAGATGTATGTCACATATTGCAAAAATAAGCCTGATTCTACTCAGCTGATATTAGAGCATGCAGGATCCTACTTTGATGAAATACAGCAGCGGCACGGATTAGCCAATTCCATCTCCTCCTACCTTATTAAACCAGTTCAGCGAATAACGAAATATCAGCTCCTTTTAAAAGAGCTGCTCACGTGCTGCGAGGAGGGGAAGGGGGAGATCAAGGATGGGCTGGAGGTGATGCTCAGCGTGCCTAAGCGGGCCAACGATGCCATGCACCTCAGCATGCTGGAAGGGTTCGATGAGAACATTGAGTCTCAGGGAGAGCTGATCCTGCAGGAATCCTTCCAAGTGTGGGACCCCAAAACCTTAATCCGAAAGGGCCGTGAGCGGCACCTTTTCCTGTTTGAGATGTCCTTGGTGTTTAGTAAAGAAGTAAAAGATTCCAGTGGCAGAAGCAAGTACCTTTATAAAAGCAAATTGTTTACCTCAGAGCTGGGTGTCACAGAGCACGTTGAAGGAGACCCTTGCAAATTCGCACTGTGGGTGGGGAGGACACCAACTTCAGATAATAAGATTGTCCTTAAGGCCTCCAGTATTGAGAACAAGCAGGACTGGATCAAGCATATCCGGGAGGTGATCCAGGAAAGGACCATCCACCTGAAAGGCGCCCTGAAGGAGCCCATCCACATCCCCAAAACAGCTCCAGCCACGAGACAGAAGGGAAGGAGGGATGGAGAGGATTTGGACAGCCAAGGAGATGGCAGCAGCCAGCCCGATACGATTTCCATTGCCTCCCGGACGTCTCAGAACACGCTGGACAGTGACAAGCTGTCCGGCGGCTGCGAGCTGACCGTGGTGATCCACGACTTCACGGCCTGCAACAGCACCGAGCTCACCATCCGCCGCGGCCAGACCGTGGAAGTCTTGGAGCGGCCCCATGACAAACCCGACTGGTGCCTGGTGCGGACCACTGACCGGTCGCCTGCGGCCGAGGGCCTGGTCCCCTGTGGCTCCCTGTGCATCGCCCACTCCAGGAGCAGCATGGAGATGGAGGGCATCTTCAACCACAAAGACTCACTGTCCGTCTCCAGCAACGACGCCAGCCCGCCCGCCTCCGTGGCCTCCCTCCAGCCCCACATGGTAGGGGCGCAGAGCTCGCCGGGCCCCAAGCGCCCGGGCAACACGCTGCGTAAGTGGCTGACAAGCCCCGTGCGGCGGCTGAGCAGCGGCAAGGCGGATGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAAGGACTCGGACGACAGCGCGGCCACCCCGCAGGACGAGACCGTGGAAGAGAGAGGCCGGAACGAGGGCCTGAGCAGTGGCACGCTTTCCAAGTCCTCATCTTCGGGCATGCAGAGCTGCGGAGAGGAAGAAGGGGAGGAGGGGGCCGACGCCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGCACAGCCTGCTCCAGCCAGACTCCCAGGACGACAAGGCCTCTTCTCGGTTATTAGTCCGCCCCACCAGCTCCGAAACACCGAGCGCAGCCGAGCTTGTCAGTGCAATCGAGGAACTCGTGAAAAGCAAGATGGCTCTGGAGGATCGTCCCAGCTCGCTCCTCGTCGACCAGGGGGACAGCAGCAGCCCCTCCTTCAACCCTTCAGACAACTCCCTGCTGTCCTCCTCCTCACCCATCGATGAGATGGAAGAGAGGAAGTCCAGCTCTTTAAAGAGACGCCACTACGTTTTACAAGAATTAGTGGAGACAGAGCGTGACTATGTGCGGGACCTCGGCTGTGTGGTGGAGGGCTACATGGCACTTATGAAAGAAGATGGTGTTCCTGACGACATGAAAGGCAAAGACAAGATTGTGTTTGGCAACATCCATCAGATTTACGACTGGCACAGAGACTTTTTTTTAGGAGAGTTGGAGAAGTGCCTTGAAGATCCGGAAAAACTAGGATCCCTTTTTGTTAAACATGAGAGAAGGTTGCACATGTACATAGTTTATTGCCAAAATAAACCAAAGTCTGAACACATTGTCTCAGAATACATTGACACCTTTTTTGAGGACTTAAAGCAGCGCCTGGGCCACAGGCTGCAGCTCACGGACTTGCTGATCAAACCCGTTCAGAGGATCACGAAGTACCAGCTGCTGCTGAAGGACTTCCTCAAGTATTCCAAAAAGGCCAGCCTGGATACATCAGAACTAGAGAGAGCCGTGGAGGTCATGTGCGTCGTCCCGAAGCGCTGCAACGACATGATGAACGTCGGGAGGCTACAAGGCTTCGACGGTAAGATCGTGGCCCAGGGCAAGCTGCTCCTGCAGGACACGTTCTTGGTCACGGACCAGGACACGGGGCTGCTGCCTCGCTGCAAAGAGAGGCGGGTGTTCCTCTTCGAGCAGATCGTCATTTTCAGTGAGCCGCTGGATAAAAAAAAGGGCTTCTCCATGCCAGGATTCCTGTTCAAGAACAGTATCAAGGTGAGCTGCCTTTGCCTGGAGGAAAACGTGGAAAATGATCCCTGTAAGTTCGCTCTGACATCGCGGACGGGTGACGTGGTGGAGACTTTCATCCTGCACTCATCCAGTCCAAGTGTCCGGCAGACGTGGATCCATGAAATCAACCAGATTTTAGAAAACCAGCGCAATTTTTTAAACGAGTGAAAGCAGCAGCGGTAGCAACATCTCCACCATGTTGGTGACACACGACTACACGGCAGTGAAGGAGGATGAGATAAACGTCTATCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAATCAACAGAACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCCGAGGGCTGGATTCCGGGCTTCGTCCTGGGGCACACCAGCGCAGTCATCATGGAGAACCCTGACGGGACTCTCAAGAAGTCAACATCTTGGCACACAGCACTCCGCTTAAGGAAAAAATCTGAGAAAAAAGATAAAGACGGCAAACGGGAAGGCAAGTTAGAGAACGGTTACCGGAAGTCTCGGGAAGGACTGAGCAACAAGGTATCTGTGAAGCTTCTCAATCCCAACTACATATATGACGTTCCCCCAGAATTCGTCATTCCCTTGAGTGAGGTCACGTGTGAGGCAGGCGAGACCGTTGTTCTTCGATGTCGGGTTTGTGGCCGCCCCAAGGCCTCCATCACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGACGGTCACTACAGCATCTCCTACAGCGACTTGGGAGAGGCCGCTCTGAAGATCGTGGGTGTGGCCGCCGAGGACGACGGCGTCTACACGTGCATCGCGGTGAACGACATGGGGTCAGCCTCGTCTTCAGCCAGCCTGAGGGTTCTAGGTCCAGGGAGTGATGGCATCGTGGTGACCTGGAAGGACAACTTTGACTGCTTCTACAGCGAGGTGGCCGAGCTCGGCAGGGGCAGATTCTCTGTCGTGAAGAAATGTGATCAGAAAGGCACCAAACGAGCCGTGGCCACTAAGTTTGTGAACAAGAAGCTGATGAAGCGTGACCAGGTCACCCACGAACTTGGGATCCTGCAGAACCTCCAGCACCCGCTGCTGGTGGGCCTCCTGGACACCTTCGAGACCCCCACCAGCTACGTGCTGGTCCTGGAGATGGCCGACCAGGGACGGCTCCTGGACTGCGTGGTGCGGTGGGGGAACCTCACGGAGGGGAAGATCCGGGCGTACCTGGGGGAGGTTCTGGAAGCCGTGCGATACCTTCACAACTGCAGGATAGTGCATCTGGACCTAAAGCCTGAGAACATCCTCGTGGATCAGAGCTCAGCCAAGCCGACCATCAAGCTGGCTGACTTCGGAGATGCCGTCCAACTCAACACGACCTACCACATCCACCCATTGCTGGGGAACCCCGAGTTCGCAGCCCCCGAGATCATCCTGGGGAACCCGGTCTCCCTGACCTCAGACACGTGGAGCGTGGGCGTGCTGGCCTACGTGCTTCTCAGCGGCGTGTCCCCCTTCCTGGACGACAGCGTGGAAGAGACCTGCCTCAACATTTGCCGCCTGGACTTCAGCTTCCCAGAGGACTACTTCCAAGGAGTGAGCCAGAGGGCCAAGGACTTCGTGTGCTTCCTACTGCACGAGGACCCCGCCAAGCGCCCCTCGGCTGCGTCGGCCCTCCAGGAGCGGTGGCTGCAGGCGGGCCACGGCCACGGCAAAGGCGCGGGCGTCCTCGACACGTCCAGACTGACCTCCTTCATTGAGCGGCGCAAACACCAGAACGACGTTCGACCTATCCGTAGCATGAAAAACTTCTTACAGAGCAGGCTTCTGCCTCGAGTTTGACCTGTCTTGAAGTCCTTTCTCATTCTCTTTCACCTGCCAATCAGCCGTTAAGTCTGACTTTGTTTATTTTTTTTTGGAAGAGAAAACAACAAACCGACGACGACGTAAGCAGTCCGCTGCCCGATTGTCCCGTCGTGTGACACCGCGTGCGTTCCCGAGCGAGCTGTGCTCTGCAGCTGCCTGGGACTCGAGCCACAAGCCCTGCGGGGTGTGGGGGGAGGGGTGGAGGCCTTCTGGAACACTCTGCGAGAGCGGAGACAGCGTTGCTGAGTCACAGTCTTTTATTCAGGTTTCTGCAAAAAAAAAAAAAAAAAAAATTTTAAAAATAAAAAGAAACTTTTTTAAACGAACACGAATAGCATTTTGCAAATTGAAAACATTTTCCAGGATTTATTCAAGGAAACAAATGCCTATGTTCAACCACTGGTGTTAACGAACAAAACAAGATACTGGACACCTCTGGGGAAGAGCCCCCCCACCCTACCCCCAGCGGCGGCCTCGTCCAACTCGGGGGTCCCCCTGGCTCTGAGCTTTTTCCAGCTGCCCCGTCTGTGTGCCTCTCGCCAGGACGCCAGACTGGGCTTCTGAAATGTGCATTCAACCTCAAACTTTTGCATAAAAATAGAATGAATCGTTTTGCTCTGATGAAATGTAGGCCTTACTTGTACATAAGACTGGTCCTGCCTTCGGTCTGCCCTTTCCCTTCACCCCTGCCTTCCCGCCCACCGCCCGGGGCTTCCTTTAGGAGGGGTCTAAGGGGTCTGCCCATCCGCGAGGAGGTCAGGTTGGGTCCTGCCCTGCTACCCCCTCCCCACCCCCGCGTCCCACCCCCTAAGCCGTCAATCAGATTGTTGAGCAGTATACAGTCCGATGAAAATACTGTAAATGCGCTCATTGGGGTTTGTTTTTTTGTTTGTTTTTTTTTTTTTGGTTTTATTTCATATCATGTGCAATGTTGTGGCTTTAACATTTTATGCAACTATTTATGAAGACCTCTGTTGTACCTGTAATAAATATATAGAAAAAGCACATATTCGTACAGTGAGATTTATGGTTTTTGTGCGTGTATCGGGGGCGGGGTGGGGGGTGGGGTTCGTAGCCCTGTGCCATCGGTTCAAGGAGACAACTCTTGGTGAAATTTGTCAGTTTTGAGGACTGTACAAAGTGATTTCATACTCTGAATATAAAACTGGATAATAGGGTAATGTTTTAAATTTTATTATTCTATTATTCAGAATGCCAAAGTATTATTTTTTTTCCCAAAATCAGTCTGGACATTTCCTACTTTTTAGACTTTTTGACATTCAACTTTCTGTACAAAAATTGGCTGGATTTTGAGCTTTTGGTAAGAAATAAAAGCCAGTTAGGCACCAGCCGCCTCGAGGCTGGCTTTGGTGTCTGTGGCACTGTAGTGTGGGAGGCCCTCAACAAGAGACGCTGGGCTTCTGGGCACGCTTGAATTTTTCTGGATGTCTTTTTATCTTTGTTGTGTGAAATACACTTAAAAGACCAGCCCGCTTCCCAAGCCAGCCAGACACCTGGGTCTTCAGCCATAAACTGGCATAGTTCAAGCTTTGCAGCTTCCAGTGTATTTTTATTTATTCTTTTGTTGAATTTTCGTTTGTTTGTTCCTTGTAAAATTGTACAGAAACTTTTTAAAAGAAATTGGATTCAAAACTGGATGTGTATTCGTAACCTCACAACTTTTATTTGTGTATTGTTTCTTTTTATTATTTCAGTTAAAATTTTACATTATTTTGCATGTATATTTCTTTGTACAGAGACCTTACATGTTTACACAGTATGATGTGATGTAAATATTTTATTTTGCCATCAGTTATTTTAAAAAATTAAACATATTTGCCTG EMBV3_00315 CTTGCTGCTTGGATGTTCTTGGAGGCTGTTTCTTACATACAGGTTTTTTAATGTGACCCT Gene GeneID:613927|PDIA6:XM_002691528:558_cdna Constitutive 2 NULL GeneID:613927 11 GENE PDIA6 NULL protein disulfide isomerase family A, member 6 EMBV3_37637 GAAGAGCACGCAGGGCTGGAATAGCACAGAACTTAGTGCAGGAGTGACAGTGAGACTGAA Gene BVT0102_334401 + 0 NULL GK000019.2:13247630-13248521 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092313 TCONS_00092311 TCONS_00092310 TCONS_00092312 TCONS_00092314 1 XLOC_056858 Coding TCONS_00092310 XLOC_056858 Coding Coding DHRS11 19:13237187-13248113 j TSS69499 1688 2 TCONS_00092310_2 181 0.0562796208530806 7 0.846132723112128 1.04633906061204e-09 0.000214298272837994 5.310412616939e-20 6.31786877276103e-10 8.74523761693379e-10 3.770185883355e-10 1.07706075855168e-12 2.16031570456194e-10 9.08060491442547e-10 4.31921655034833e-09 0.000939656938630842 0.00015847462781585 3.4165847200872e-08 1.07915687998333e-13 2.51528955711718e-09 0.00243887841480614 8.5135231033412e-25 4.83038174800682e-05 1.13178340173636e-08 1.09349589463121e-07 3.4760956560313e-09 0.000669094090980212 0.000882870843298144 0.0004960997600864 2.87481406488318e-10 8.85493106068818e-25 1.80785593188796e-77 0.000246034972908614 1.09491664665167e-27 0.00104897477450644 NM_001035088.2 DHRS11 Bos taurus dehydrogenase/reductase (SDR family) member 11 (DHRS11), 0.0 2082 99.74 0.687796208530806 NM_024308.3 DHRS11 Homo sapiens dehydrogenase/reductase (SDR family) member 11 (DHRS11), mRNA. 0.0 1034 79.92 0.695497630331754 TCONS_00092310_2 sp|Q3ZBV9|DHR11_BOVIN DHR11_BOVIN Dehydrogenase/reductase SDR family member 11; 6e-135 382 100.00 0.994475138121547 1 coding 0 0 0 0 0.0194723032070841 0.857140584681526 0.00662164138785129 0.890436280248674 TCCTGGCCTTTGGGTCAGGATAGGGAAGGCGGACAGAGCAAGAGGCGAATGTGACCTGTCGAACGAGGAGGACATCCTCTCCATGTTCTCAGCGGTCCGCTCTCAGCACAGCGGTGTGGACATCTGCATCAACAATGCTGGCCTGGCCCGGCCGGACACCCTGCTCTCAGGCAGCACCAGCGGCTGGAAGGAAATGTTCAATGTGAACGTGCTGGCCCTCAGCATCTGCACGCGGGAAGCCTGCCAGTCCATGAGGGAGCGGAAGGTGGATGACGGGCACATCATCAACATCAACAGCATGTGTGGCCACCGAGTGCCACCCCCGGCTGAGACCCATTTCTACAGTGCTACCAAGTACGCTGTCACCGCGCTGACGGAGGGGCTGAGGCAAGAGCTCCGGGAGGCCCGGAGCCACATCCGAGCCACGTGCATTTCTCCAGGAGTGGTGGAGACACAGTTCGCCTTCAAACTCCACGACAAGGACCCCGAGAAGGCAGCCGCCACCTATGAACACATGAAGTGTCTCAAACCTGAGGATGTGGCCGAGGCCGTGATCTATGTTCTCAGCACGCCCCCTCATGTCCAGATCGGAGACATCCAGATGAGGCCCACAGAGCAGGTGACCTAGCGCCCTGTGGGGAGCTCCTCCTTCCCGCATCCCCCTTACAGCTGGGCACCTGCCCCTGGACTGGGGGTGTTGATTTCTGAACCCCTGGATTTCACTTCCTTTCCCCACCCCCACCAGGGGCTAGAAAACTTGAGGTTTTTATATGTCAAATTGTTGCCACCATGAATGGGTGAGGGGAGAGGAGGTGGTGCCCCCTGATTGTTTTACCTGCTCCTGCTTTCTTAGTCCTCTTCTTGGGCTCCCTGGCCTTTGTCTGCTGCCCTTGCCTTCTTCCCTTTGGCCTGGGGAAGGGACTGTGGCCAAAAGTGGGGCTTTCCCCTATCTTCCTGAACCCTCACCCACACTGTCCCTGAAGGATGAGGCCGCGGAGGGAAGCCCTCACCTTCCATCTGAATGCTTACTGGGGCTCCAGGCTTCCTTCTGCCCTCCCCCACCGCCCCTTCTTTGCCCCATCTCAATTCTCCAGCCCCACTGCGGCTTCTCCATCCCTCGTGGGGTCCTCCCTCCACTCTGACTATGCCAGCAGCAGACCAGGGCCTGCCTCCCAAGTGGGTTTCACTGTGATCATTAAAAAAAGAAAAATTGCATTAAAAAATCTTGGCTGCAGAAGTGTCTTTCAGTTCTTCCCCCTTCTTGTGATGAGGAATGGTTGTCTCAGAGTTCCTTGCAGGAGAGCGGGAAGGTGGGTGGATTGGGGGCATCCTTCCTGGAGTGTGAATTACCTTTCAGTTGGGTCTGGAAAATGGGTAGGAATTTCCGGCCAGAAAAAGAGGACAGCGGGGCGCGCCAGGCAGGGAGGCCCCAAAGAGCACGCAGGGCTGGAATAGCACAGAACTTAGTGCAGGAGTGACAGTGAGACTGAAAAGGCAGCTCCTGCCTGGATCCCAGGGTGGGGGTGGGGATGGGGGTCATGAGCAAGGAGTCTGGCCCTTAACCTGTGGGGCCAAGGGCATCAGCTGGCTTGTCAGTATGCCAGAGCTGTCACTCAGAGAATCAGGGCCGTGGGATCGGAAGTCGTCCGTGGGGTTTCTGCTGACGGGTGCTAAGGTCTGACAGGCAG EMBV3_07296 CTGCTTGTCTGTGCATGCTCTACTTCCTGTTGTAAATACACGATTGAACATAAATCCAGG Gene BVV0102_147516 + 0 NULL GK000018.2:43158962-43254167 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083265 TCONS_00083272 TCONS_00083274 TCONS_00083266 TCONS_00083268 TCONS_00083273 TCONS_00083269 1 XLOC_051218 Coding TCONS_00083274 XLOC_051218 Coding Coding DPY19L3 18:43089834-43162539 j TSS62619 5883 1 TCONS_00083274_3 638 0.125276219615842 16 0.91930292693662 1.0343027722761e-08 0.000111246282160633 3.47962612620979e-17 7.36786711517509e-28 5.47768764324921e-06 6.76166682811707e-38 7.4321515373857e-05 8.68132627935462e-05 1.01029563700701e-10 9.29910510410566e-43 7.05750428095676e-06 2.80866827248165e-31 1.56884171812789e-16 2.12458452276707e-16 3.18474571091756e-05 2.4829741095381e-08 3.32086979180909e-09 0.00138294014071536 2.99372669628623e-20 4.52170571110848e-33 0.000173149621585119 8.73300479742418e-05 2.34815558147876e-09 0.000502801860558129 4.60901577117237e-06 0.00024277767943192 4.30764075587076e-05 0.000124564191171548 4.35296367182877e-16 2.23712852708555e-58 XM_600249.7 DPY19L3 PREDICTED: Bos taurus dpy-19-like 3 (C. elegans) (DPY19L3), 0.0 2623 99.79 0.24817270100289 NM_001172774.1 DPY19L3 Homo sapiens dpy-19-like 3 (C. elegans) (DPY19L3), transcript 0.0 1815 76.11 0.425633180350161 TCONS_00083274_3 sp|Q6ZPD9|D19L3_HUMAN D19L3_HUMAN Protein dpy-19 homolog 3; 0.0 1032 74.86 0.998432601880878 1 coding 0 0 0 0 0.00269089279151508 0.986002776402717 0.0349569926451061 0.484994063048182 ATGATATCCATCAGGCAAAGAAAAGGAATACAAACCACAGAAGTTTCTGAGGATTACACGGCACAAGAAGAAAATGTGAAGTTGGAAGATAAATTGCCATCTAGTTGTACCAATAGACGATTATGGAAGATTCTGTCATTTACAGTTGGCGGAACTGTTGCCCTGTGCATTGGGCTTCTTACGTCTGTCTACCTGGCCACTTTACATGAGAATGACTTGTGGTTTTCTAATATTAAGGAAGTGGAGCGAGAAATCTCATTCAGGACAGAATGCGGACTGTATTACTCCTACTACAAGCAGATGCTGCAGGCTCCTACCCTCATGCAAGGTTTTCGTGGCTTAATATATGATAACAAAACGGAATCTATGAGGACAATTAACCTCCTTCAACGAATGAATATTTACCAAGAGGTTTTTCTCAGTATTTTATATAGAGTTCTGCCCATACAGAAATATATAGAACCGGTTTATTTTTATATTTACACCTTATTTGGACTCCAAGCAATTTATGTCACAGCTCTTTACATAACCAGCTGGCTCCTGAGTGGTACGTGGCTTTCAGGACTGTTAGCAGCCTTCTGGTACGTCACAAATAGAATAGATACCACAAGGGTGGAGTTTACCATCCCCCTGAGAGAGAATTGGGCGCTGCCATTCTTTGCAATCCAGATAGCAGCAATTACATACTTCCTGAGACCAAACTTACAGCCTCTTTCTCAAAGGCTGACACTTCTTGCCATTTTCATATCAACTTTTCTCTTTAGTCTAACATGGCAATTTAATCAGTTTATGATGCTGATGCAAGCATTAGTGCTGTTCATACTGGACTCCCTAGACATGTTGCCAGCAATGAAGAAAATTCTTAACCTTAAGTCAGACGAACACATATTTAAATTTCTGAAGGCAAAATTTGGATTTGGAGCAACAAGAGATTTTGATGCAAACCTATACCTGTGTGAAGAAGCATTTGGCCTTCTACCTTTTAATACATTTGAAAGACTTTCAGACACTCTGCTTTTTTATGCTTATATATTTGTTCTGTCCATCACAGTGATTGCAGCATTAGCTGTGGCCTTCCGTAATCTCAGTGATTCTGCCAATCAGCAGTCCATGTGTAAAATGGGAAAGTACACAATTGGCCTGAAACCAGACACTGCCTACAATTTAATACACACGATTCTGTTTGGATTCTTGGCATTGAGTACAATGAGAATGAAGTACCTCTGGACGTCCCACATGTGTGTGTTTGCGTCATTTGGCTTATGCAGCCCTGAAATATGGGAGTTACTTCTGAAGTTGATCCATCTTTATAACCCAAAGAGGATATGTATAATGCGATATTCAATACCGATATTAATACTGCTGTATCTGTGCTATAAGTTCTGGCCAGGAATGATGGATGAACTCTCCGAGTTGAGAGAATTCTATGATCCAGATACAGTGGAGCTGATGAACTGGATTAACGCTAACACTCCAGGGAAGGCTGTGTTTGCTGGAAGCATGCAGCTGCTGGCGGGCGTGAAGCTGTGCACGGGACGGACCTTAACCAACCACCCACACTACGAAGACAACAGCCTCAGAGAGCGGACCAAAGCGGTTTATCAGATATATGCAAAGAGGGCCCCAGAGGAAGTGCATGCCCTGCTGAGGTCGTTTGGCACTGACTACGTGATCCTGGAAGACAGCATCTGCTACGAGCGCAGGCACCGCCGGGGCTGCCGGCTGCGGGACCTGCTGGACGTCGCCAATGGACACATGATGGACGGCCCAGGAGAGAACGATCCTGATTTGAAACTTGCAGGCCACCCTCGCTTCTGTGAAGAGATTAAAAAAAACCTGCCCAGCTACACAGCATACTTCACTAGAGTGTTCCAGAACAAAACATTCCACGTTTACAAGCTATCCAGAAACAAGTAACAGAGCTTTCTATTCAATCTCTATTTTTGATACGTGAAACTCCATCATAATGAAACTCAGATGATGTTTCATATGTAATTAGGTAGCCCGAACCTTAAAGCTGTGATATGATTAAGTCTACAAATGTTTACACAAGCATTACCATCTTTGAAAGTATCTTATACAAGCTTCAGTCTTTGTCCTGTTTCATGAATGTTCTTTAGCCTAAATGTTTCCACTTTCTAAAAGTGATCTAGAAGTTTGTTGTTGGGTAGAACAATTAAGTGTTCTATAGGAAGCCTGAACAGTTGCATGCGTGTGTGCATGCTGAGTCACTTCAGTTGTGTCTGACTCTTTGCAACCATATGGACTGTAGCCCACCAGGCTCTTCTGTCCATGGGATTCTCCAGGCAAGAATACTGAAGTGGGTTGCCATGCCTTCCTCCAGGGGATCTTACCAACCCAGTGATTAAACCTGCATCTCTTATGTCTCCTGCATTGGCAGGTGGGTTCTTTACCACTAGCGCCACCTAGGGAGCCCGGAACAGTTGCATATCCTGTTGTAAATCCAAAGCCTGTTCAGGATTTGAAATACTTCTAATTTTTAATTGACTTAAAACAGCTATAGTTGAATTGAATTGAGGAAATGCATAATTAAGTTATTTAATATTATTTCACCAGTGAAGACCAACTGGTGACTTTTTAAAAAGCTCTTTATTGTCCTGTTTCACCTAAAAATTTTATAATGTTTTCCATTTGTCATGCTTTTACTATTTAAAGAAAGATCATGTTAGGCCTTCGTATATATCTAAATTTTCGTTGTGCTGTGTCTGCAATGTAATGGGTAGCACTTCAGCAGTGTGTGTCTGTGTGCATGTGTGTACATGAGCACGTGCATGCGTCTTTTAATGCTGGACACAGAAAAGGGTTACAAATTCCATACTGTAAGTCCTTAAAGCAGCAGCAATGTTACGTAGCTGAGTCAAATTTGTCACTGTTTAGTGTTATTATTTTAAAACCTGTTGATACTATTTAACCTATCCTGTAAGTAAGAAAATTTTTCTTTATTTCTTACTCATTCAAATTTACTGGGTTTGCAAGATTTTGTAAACTCTTTGTTTTTAGCCTTTGTATTTTTTACAGCCTAGAACCTTGCAAAGTCTTACTATTTTTTAAATGTTGTATCTTAACTAACTTACAACTATGATATTTTTGGCAGAAAGCATTTTCATACTAGGTTTGATTTGTGGTCTCCAATCTTACTGCAAGGGCCCTTGATAGGTTGTTCTTTTTCTTACTCAAAGGTAACCAAGTGCCTCTAAGTCATGCTTACTTGTAAACAACAATGAAGAGGATCATGTGTACCTTGTACCTGCTCAAAGTTTTTGATAATTGCTTTTATAATTAATTTCTAATGATAGGGACATGTAAAGAAGTTGCTGATAAAAGCATATTGTGTTTTCAACTAAATCAAGATGGCTAATGAGATTAACTTTCATCTCTCATGTTGGAAATGATTTAAATGTTTCTCCTCACAATCGTATTAAAGTAAATCGCTGTAGGCATGAAGATGGATGGATCATATGTCCAAATGATTTTTTATTCACCTACTACTTATTAAGCAATATTCAGAAAGAAATTTTACACTGTCATGTTGGACTCAAGGACACTTGGCTTTTATCACAACTTATTTAAATAAAAAATTGCCAGTAGCTGGGTTATTAAATTATGCAACTGAAACTCCTGAATTATGTCTTATATCCCTTAATAGGGTTGGAGACCACGGCAGTTTAGGATAATACAATAATGAAACATTTTAATCAGTACTAAAACTTTGATTCTGTAATGATGCATGCCTATTGTAGCTGACAGCATGGGTCAGTCCGTTCTTCAGTGAGTGCCTTACTCTAGTTGAAACCAAGCACATGTAAGGTACAGTATGTTAGACTATCTAGTTACGTTTTTAAAACCCCCTATTACCTTCTCAGAAATATTTTGATTTATTTTAAATATTTCTATATGTATTATTATAATCTACACATTTGGGTATTTGGAGTTTCAGTATACTAGACACACGTACTTAAATTTTTATGCTTATCATCACTGCGTTGATGGCACACAGTAATCTTTTTTTCGTGGTTTAGGTGCCATCTGTTGCCAAAACACTTAGTGTTCAGTCTTTAGTGAAAAATATAAAGTGCCAAGAAATCTTGCAAGACAGAATCCATACATACACTCTTTCCAAAACACTGTGACCATGTATAGTAGACGTTTTTATTTCCTGATGACCAAATCTCTCAGTGAATCATGTTAAATATTTTAGTGCTCCTCAGTTTTCTCTTTTATGACCCTCTCCTTGGAGTACACAGGAGGAAAGAGAGGAATGCGGCAGACTCCTGGCTCTCTGCCGAGCCAGAGCAAGTGACCTGTAGCCCAGGGTCCCTTCCACACGGATCTCCGTGGCTGTGCTAATATTTGATAATGACCTCAAATTACGGCTGTATTTTATGCATAGAAATACCACTAGATTTTGCTTCAGAGTTAGCATTCAAAAGAAACTCTAAGTACAGTAAGTGCTCTTATTATCCTTTACGTACACAACTCACCAGATCCCTTCATGGTTTCCAACGTCATGTAAGCTGACTGCCACCCAGCGCCACGGGGGGCTGCTCCCCGCTGCTCTGTTCTCACAGGCCTCAGCTCCCTCCTTGGAGTTCTCTGCTTGTCTGTGCATGCTCTACTTCCTGTTGTAAATACACGATTGAACATAAATCCAGGACATTTCGATCTAAAACAAAAGGATTATTTCTGTGAAAGTTAGCTAGAATGCTTTGATCATATTTGATAAACGTTACCACTAGTAAAAACTGCTTTTAAATTAATTGTGTTTGGGAAAATTATAAAATATTGGGAGTACTTAAAATTCAAGAAAATTTATGAGCTTAGATTGCTTCACAGATTTATTTATTTTAGTCCTCATTTCACCTTTAAAAAAATCTAGACTGATCAGAAGATATTAAAATGTACCCAAAGCATGTTATTGGTATGATTTATTCAAGAATAAAACCACAGTCATTGGCTGCTACTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGTGACCCCATAGACATCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCACAGTCATTGGGCCCTTATGCAAAGGAAACGTCTCAGCTTTACATCAAAAGATGAGCAAATGAATATACAAATTATACATGTGAAGTTACGATTCCCTGCTTTGACCTACTTATCTTCATTAAATGACTAGCTGCTGATGCTGATCACAGTGACTGATCTACTACAGTTGAAAGGTTCCGGTCACTTTATTATAGACTTAAAAGTAGGAATTCATTTCAGATATATTAGCCAGGACCACAGTTAGGTGTTATCTGCGTCATTTGTTGTCCACTTAAAGGTGATTTTCTTGACCTCACCGAGATCAACTAGACAAATATGTTTATGTGAGTGTGCGTGTCTTTGTATGTGTTTGGTTGAGGCTGGTGATTTCAAGGGCATATGTAGATACTGCAGACCAATGTTTCATCTGGCCTGCATCTTTAAAACTAACTAAAAATGTTTATTCTTATTCCACATGAACCTTGTAACAATTTTAGCTCATCTTTGGCCAAAACTTAACCTAAAGTAACACAGAAATATTCCATTTTTAAATTTTCGTTTAAACCTTGGAATTAATAGGAAGACAAAATGTTCTCAGATTATATAACTTGGCCAGTATGCTCCTAAGTGCGTTATATACAACAACCTTTTGGCATAAAAGAGAGTGCTTGTTTGTTCATGGGAAAAAGCTTTGAAAATGAGAGAGAGGCTTACTTTCTTGTGGCAATTCATTTTCTGTACTTAATATCCTATGGGTAAAATCTTACAAAGAGCTTTTATAATTTGTTGAACTGTATGAAGATTATGTACTGAATAAAGCTCTTTTAAGTTACACAAAA EMBV3_38436 GGCCTCACTGGAAGCAACTATTTTCTCAGCTGTCAGTGTAACTGTTGCAGTTTTTATCGG Gene GeneID:519935|HIST1H2BI:NM_001046246:101_cdna Constitutive 0 NULL GeneID:519935 23 GENE HIST1H2BI MGC133641 MGC137068 histone 1, H2bi EMBV3_25781 CCCCACTCCTGGCCCCAGACCATGCCGTAGGATGGACTCGCTGCAGAAGCAGGACCTCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32673 TTGGATGATAGTGGGGACCATGGGGGTATGGGGTTGTAGCCTAGGGAAGGACTACTTGGT Gene GeneID:506099|SPATA24:XM_002689265:188_cdna Constitutive 1 NULL GeneID:506099 7 GENE SPATA24 NULL spermatogenesis associated 24 EMBV3_34757 CAGGGAGAGGGATGGTGATAGAGAAGCAGTAACAGGCTAAATCAAGGACCAACTCTTGGC Gene BVV0102_379906 + 1 EMBV3_27530 GK000022.2:48337781-48370123 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03791 TGTTTTTGTTCCACACTATCACCCCCACATCTCACCGACTAGATGGCTGCCTGTTGCTGG Gene GeneID:505540|MAMSTR:XM_002695113:594_cdna Constitutive 0 NULL GeneID:505540 18 GENE MAMSTR NULL MEF2 activating motif and SAP domain containing transcriptional regulator EMBV3_12735 GGGCTGTTTCCACGTTTGATCCCTAATGCTGGAGTTGGCCTTAAACACAATACAACAAAC Gene GeneID:618286|TBC1D14:NM_001099176:47_cdna Constitutive 2 NULL GeneID:618286 6 GENE TBC1D14 MGC155085 TBC1 domain family, member 14 EMBV3_37274 ACATCCGCTTTGTGGAAATGCTCATGTGGTGTGACCATCCCGAATACCCATTCCATGATG Gene GeneID:513855|AKR1D1:XM_002686993:848_cdna Constitutive 0 NULL GeneID:513855 4 GENE AKR1D1 NULL aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase) EMBV3_17872 GAGTAGGACGTGACTGAAGTGAACTAAGCATGCACACACCACCGAAGTGATCTTACCTGC Gene BVT0102_055342 - 0 NULL GK000023.2:45303616-45312735 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21018 AAATTTGGCAGAACCTAGCATTTCTGAGAACCAAGAGTGGGCTTGGGGGCAGGTCAACAG Gene GeneID:781353|RYK:XM_002685100:75_cdna Constitutive 0 NULL GeneID:781353 1 GENE RYK NULL RYK receptor-like tyrosine kinase EMBV3_27475 TTGGAACCCAGGAGCCAGCCACAGCCATGCCAGAGACAAGAGGCTCAACACAGACCCTGA Gene BVV0102_231012 + 0 NULL GK000011.2:105946124-105990506 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39363 CTACTTTCTTGCCAGCCTGGCAGTTTGAGGGCCTGTGTGTGCACCTCACCCCCCGCAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02157 CTGAGTCCAGAGCCACCCAAAGCATCCTACTCTTGGCGAGCACCTTCATGTGTTTCCATA Gene GeneID:787075|BOSTAUV1R420:XM_002695275:34_cdna Constitutive 0 NULL GeneID:787075 18 GENE BOSTAUV1R420 NULL vomeronasal 1 receptor bosTauV1R420 EMBV3_03455 ACAATGAAGTGAATCAACTATATGTATGCATATATCACCTCCCTCTTAAGCCTCCCTGCC Gene BVT0102_352078 + 1 EMBV3_27620 GK000014.2:23886643-23990192 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34200 GAAAGTCTGCATTGTAGGCTCTGGCAACTGGTGGCTGTCCCTGATGTGGTCCAGGCTGCA Variant GeneID:525042|GPD1:NM_001035354:83_cdna 78^255 3 EMBV3_21968 GeneID:525042 5 GENE GPD1 NULL glycerol-3-phosphate dehydrogenase 1 (soluble) EMBV3_04643 ACTTATTACACCGCCTGGGTAATTCTCTTGGTATATTCATCACCTACGTGATGCTGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34324 GAGGCCATCCGTCTGTTGCGCAAGAATTTCCCCAGGCCGGGGCATTTGATCTCAAGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09427 ATACGGACACAGCTTCAGACTACTTCCCTTGGTATAAACAAGAACCTGGGAAAGGTCCCC Gene GeneID:100296357|LOC100296357:XM_002707865:243_cdna Constitutive 0 NULL GeneID:100296357 10 GENE LOC100296357 NULL hypothetical protein LOC100296357 EMBV3_40633 CCTCTTCTATCTCACTGTTATGGAGACTCTAGACTTGAGTGAGGAACGTTGCCTTAAGGG Gene BVT0101_039874 + 0 NULL GK000008.2:46111381-46138800 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227534 TCONS_00227532 TCONS_00227536 TCONS_00227529 TCONS_00227537 TCONS_00227535 TCONS_00227530 TCONS_00227538 TCONS_00227533 TCONS_00227531 1 XLOC_138265 Coding TCONS_00227529 XLOC_138265 Coding Coding PTAR1 8:46135087-46149127 j TSS169840 4413 1 TCONS_00227529_1 230 3 0.685875062326377 0.00206953683411395 0.00245764190749385 0.00118590996608779 0.00207853362046554 0.00172064012761423 0.00041089680006787 0.00135977312091053 0.000673736145212554 0.00221577692000688 0.000635617128866676 0.000203107942039899 3.63081625484179e-30 3.57594704529842e-08 0.000396379674864751 0.000429358201243778 0.00186101650746225 3.72074653602763e-05 0.0032997407263932 0.00119526331319998 0.00135360800724033 0.00052649420857092 0.000750585322430129 0.000173426565748916 0.00145077473387643 0.00233069430620487 0.000940411875669462 0.000210997563619269 0.000270304076996523 7.75674341945189e-05 6.93525801597224e-34 XM_005210018.1 PTAR1 PREDICTED: Bos taurus protein prenyltransferase alpha subunit repeat containing 1 (PTAR1), transcript variant X1, mRNA. 0.0 7867 100.00 0.988216632676184 NM_001099666.1 PTAR1 Homo sapiens protein prenyltransferase alpha subunit repeat containing 1 (PTAR1), mRNA. 0.0 1620 71.39 0.744391570360299 TCONS_00227529_1 sp|Q7Z6K3|PTAR1_HUMAN PTAR1_HUMAN Protein prenyltransferase alpha subunit repeat-containing protein 1; 3e-112 332 77.21 0.930434782608696 1 coding 0 0 0 0 0.931718964465957 0.116119507948303 -0.0448648458164721 0.52480434194369 GGGAGCGATGCTACATTCTCAGGGGCCTGGAGCAGTGAATACAAGTTATCTGATTCTTCTTGATGAACTATCTTCTACTAAACACTGGGCATCCATGCATGTTTCAGACCACAGTGGATTTCACTACCGCCAATTTTTATTAAAGTCTTTGATTAGCCAAACTGTGACTGACGGTTCTGTATTGGAGCAAAGTCCTTTGAGAAGTGAGTCAACTGTAGTTCTCCCAAAAGATGAAGAAGCAGTGGCTTCAGCAGAGGAATCAAGGATAAATCTTCCCCATCTTCTAGAAGAAGAAGTTGAATTCAGCACTGATCTTATTGATGCCTACCCAGGACATGAAACCCTTTGGTGTCATAGACGGCATGTTTTCTACCTTCAGCATCACTTAAATGGTAGGTTTCCTCACAGCGTGATCCAGTTGTCACCTGCCGACAGTCCTGGGGGAACTTTGAGTGACTTGCACGGTATCCCAGCAGGCCCCCACACGTCTCAGGCAATGGAGGTGGATGGACTCAGTGACTTTAGCAAGCAAGGCTATTCCCAGGAAATCAAACGCCTGAAGCGGACCCCAGCTCCAGACTCCCTGGGCCTGGAAATGGAGCACAGGTTCATCGATCAAGTACTGTCCACCTGTCGGAACGTGGAACAGGCCAGGTTTGCCAATGCATACAGAAAATGGCTGGTTACATTGAGTCAATGAAAGAGGTGAATTAGTCCTGCAAAGTTCCCCTTTTTAGTGCAATATGGCTTTTCTTTCTTATTTACATAGTTGCATGAACTGTTTGCTACTATTGGCTAACTATGTGATCTTCATCTTTAGGCTAAAAGTCCCTAGTAAATCTTTCATTTTATTTATTTTGTTAAGAACTGGCATTCCTTTGGCTATAAAATAACTGTGTAGTTCCTTCTTGCTAAACAGTGAGTCTTAACTTTTTTCTTTTTAACTTCTCATCCTGTATATTCCTGTCTTTGAGACTTTGCTCATTTGATTCTCCAGATTGGTTCACACACACCTCAGCCCACCTCAGTGCAGTTGCTGTATAGGCTTTTTTTTTTTTTTTGGTAATCAAAAAGTTATGCTGTAGTTTAGCTTAAGAACAATACAAATTCAGAATTACTCGATCTAATTGCTGTTTTGAGAATCAGATGGCCAGATGGATGAATTTGTGAAAATACACACCATTTCTCTTTCACTAGCATGTTATACTCGAGTCATAGGCCAACGTAACCAAAGTCAGAAGTATTGGAATTTATATGAACAACGTAGTTCTAATATAATCCATTTTTAAACTAATTATTTTAAAAAACTAATTTTATGAGTTTATGTAATTGTAGTGGAAACTTATTTTTACTACTAGCTTTGATAAGTTTTTTTACCTCAATCAATTAAAGTCAATTTTAAAAAAACCTAGAACGCCATTTTTAGTTATTACTACTTATTTTCCTCCAAATTCACCATGCAATATGGCAGGCTTATGCATAAAAACGTATCCATTAAAAACCTTCCTTTGTAAAGTTTTTAAGTTACTGAGGATACACTGGATAAACTACAAAATTTTTATGAAGGGATTATTAAGTTTACTGGCAAAAGCCAGGGGGAAAGAATAGTCTTGAAGGTTGGTTCTTCAGTCTTTATTTTAAAAAATAAAACAATTTAGAAACTTTGATACTGAATTTATCAGGGATGAGGTACCAAAGTATCCATCTTACCTTTTCAATAATAAGGGCTGCATTTTTCAAATAGGTGAGACAGATGTGGTGAAAGTAATATCTGATAATAATCTGAAAGTAATATCAGGTAATATCTGATTTCTTGATATGAAACAGTGCTTTGCATTTCTTCTTTCCACATACCTTTCTCTTTATTTTCCCCATCCGTGGTTTTTTTTTGGTCAGCTTCACTTTTGTATATTTTTCCTTGTCTATTATATTTCATAGATGTAAACTAAAGATATTCTCCTGTTTCCAGTTAATTCCATACCCCATTAAACACACACAAATATGAATATAAATTGCCCCCCTAAAAGTTACCCTAATAATGTTATTGGGTAACTTTTAGGGGGGCAGTTTATTATCCTGTGTGTATAAAATGTAGTAGTGGCTGGAACAGTGTGACCACCATGCTTTGCCTGTTTTCCTCTTTTTATGCTAGGCTGCCTGTAGGGTAAGAAGACATGTAGGGAAAACAGACCTCTTCTATCTCACTGTTATGGAGACTCTAGACTTGAGTGAGGAACGTTGCCTTAAGGGAAAAGAATAGGTACTTTACTTGTGTATCATGATTTTGTTGAGTGGCAAACTATCAAGTGAGACTTAAGAATACCAAAAAGCTTGTCTAGGCTGGTACTTATAGACAGAAGCTGCTCTTCTCTCCTAGAGCAAAAATTACCCTTTTATAACTTTTTGTAGTATTTAGGTGAGAAAATGATTGGCATTATGAGCATAATTTTATAACCTTTTATGTACAAAGCATATTTTGAATCAAATACCTCAAGGTCTACCTAGACCTCTGGATAAAACTATTACTTTATGATTTTTAGCAGCTGCAGGGATTAAGGGGTAAACTACACACAGATGACGTGGAGATCCAGTCAGTTCCTCTAATGTACGTTGCCAGATTTTGGCCTCTCTGTTAGTTTTCTTCCAAGAATCATTTTAAGTATCCTGACTGATAGGGCTTCTTATGCTTTGGTGTGTGAGTGTGAGAGTGTCAAGACATGAGTATAGACAATCTCCTGTGAAACATCAGCTAAATTTTATAATGTTCCACACTTTTTTATATCTTCCACAAAGTTTCTTGCCCTTCTTTGATGTTAACTGTCTTCTTGTGTTTTAAGTCTCTTAACTCACCCCTGCACAAAGCCATGCAGTCCTTTAATATACCTTGGTCTCCTGTCTTCCTAATAGTTTTAAGTACCAAGTAAAAATACAAATATCCAAAGGATACAGTTTGTATCTGACTCTTGTGTGCTACTTTATTTCTAAAATTTGTAATTTTCAAGTGTTCATTCACAGAAAAACATAATATTGCCCTGTGTAGTTGTGTGCTTTACTCTGAGTGGTGGACATCCAGCTCACTAGCTGTAGCATGATAATATCTCTTGGACTGAATGAGCTCATGCAGTGGAAAGGATGTGTCTATTTTTAGAGACTCATTAGTCTTCACTTACTTTTCGATAAATATGTCACTGTTAAAAGAAAAGATGATTTAGATTAACACACATTTCATCCAACTTTTACTGGAAGAATTGTAGACCATCCTAGGTCAAGAATACTACTGACAAGTTAAAAAAAAAGCAATAAGATCTGTAAATATCTTACAGATAAAATATCTGTACAATCACTCCTCCCCAATCTTTTACTTTTTTAAGTGTACCTATTTTGGTAATGTGTTCCCAGATTCTGTCTGCCTTGCATATTGTAAGGACTTATTAAATATTTATTAAATTTATGAATGATTAACTGAAGATGGGAAAATTAATCATGCAGGATGCATAGAGTGAGTTATGATTGAGAAATTGATGGAGTAGAGCACTGAATTGTCAATGAATGATGTATTCTGCCTTCATGATACTTAGGAGCAGCTATTGCATATAGAATAAGTTAATTTAGATTTTTTTCTTAATTGAACTACTTTGTTTATGCTTGTTAAATCCCAGCCAAGAAATGCAGCTGTATAATATCAGTTAACTGTACTTTAATATATATTAAAAATTCATAGAAGAATGAAGACCATTTTCATTAAGAACACTACTTTCTATTCATTTATGATGTTGGGGGACAGATCTTGCCCATAGAGCCAGAGCCACTTTTGGGGTATCTGAGGAAACTGATTTCAAAGATTTGTTGATCTGTATCTATGCATAAGTAGTCATTTTATGCTTCTCCTTTTCCCTCCACAACTTGAACTTTTTTGATATTTCTTAAACCCGTGAGTCATTTTTTTTTAAACTTAAGGATTTGATACCTTTTAGTGTCCCCTTTTTCTTTTTTATGTTTTAGCATTTTTTCTCTGGGCCCAGACTTTGAGTCATATTTCTTATTCCAGTGGTACAATTCTAATTTAAATTCAAGGCTTCATTATTTATCAGATTAAATATACAAGATGTCACACAAAGCCACTTAAGTCTTCAGATAAGGACTTAGTAACACAAGACATGCCAACAGAAGTTCTTGGATTTTTATGTGGCTTTTTTGTAGGAACGCATATATATAGTGATACACTATCATTTAGATATATTCAGGTCATGTGAATTTATGCTTGTCTAGATATATACATGTATGTGTGTGTAAAACTTAGTATTTTTGAGAACAAATTGTCAGTCTAGTATTTTTCTCTTAATAGCACAAGATGATATCAGACATGAGGGCTAAATATAAGTTAGGAATGCTACCACTTGCTATGCAACAATC EMBV3_27528 ATATGCCATGATGTTTGGGGAAGGCCCTTACGACATGGTGTTCCAGAAGGGTGACAGCGT Gene GeneID:521237|STK16:NM_001046255:89_cdna Constitutive 2 NULL GeneID:521237 2 GENE STK16 MGC137500 serine/threonine kinase 16 EMBV3_07778 CCGCCGTGTAGTGAACGGGAAAGTGGAGTATTTCCTGAAGTGGAAGGGATTTACAGATGC Gene GeneID:100294792|LOC100294792:XR_083656:123_cdna Constitutive 0 NULL GeneID:100294792 4 PSEUDO LOC100294792 NULL similar to chromobox homolog 3 EMBV3_13252 CCATGTCATCAAAATTTTAAGTAATGTGCATTGACAATAACCTTGATCAAGGGCATATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28660 CACACTGTTGTAGTATGTATAATTTTGTGATCTTTATTTCCCTTTGTATTCATTTTAAGC Gene GeneID:533757|ADNP:XM_002692502:622_cdna Constitutive 1 NULL GeneID:533757 13 GENE ADNP NULL activity-dependent neuroprotector homeobox EMBV3_42196 TGACTGCGGCCAGAGCTTCCGCCTGAAGATCAACCTGACCATTCACCAGCGGAGCCACGT Gene GeneID:536307|ZNF783:XM_002687141:525_cdna Constitutive 0 NULL GeneID:536307 4 GENE ZNF783 NULL zinc finger family member 783 EMBV3_37712 GGAACAGACGAACAAGGAACCGCTCCAGAGGGCAAAGCCGTCCAACTAACATCAAGGAAA Gene GeneID:529294|LSM14B:XM_002692257:1562_cdna Constitutive 0 NULL GeneID:529294 13 GENE LSM14B NULL LSM14B, SCD6 homolog B (S. cerevisiae) EMBV3_07495 CCTCTGATCGGCAGGGTTGTGTGAGGCGGTGTGTTTTGGGAAAGCTGTTGATGATTGATT Gene BVV0102_225001 - 1 EMBV3_26732 GK000020.2:35158962-35248346 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35430 TCTCTACCACAAATGCCAGGTGGTCTTCTTTCTGTTGGCTGCGGCTTTCTTCTCTGCCTT Gene GeneID:522932|PAQR7:NM_001038553:188_cdna Constitutive 0 NULL GeneID:522932 2 GENE PAQR7 MGC133955 progestin and adipoQ receptor family member VII EMBV3_36085 CAGGCTTATCGCAAGGATGATTTCGTTATGGTTTTGCTAGTGGAAGACTCAGAAAAATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22014 CATGAACTTCCTACGAGACAACGCGGAAACAAGTAAGCCTCTGCAAATGTCGATGCGAGC Gene GeneID:528169|PANX1:XR_084105:13_cdna Constitutive 0 NULL GeneID:528169 29 PSEUDO PANX1 NULL similar to Pannexin-1 EMBV3_42139 CCACATTTTTAAAGGGGTTGGAGGAGAGGGAGGGGAAGACATGGCAACATTCCAGAAACC Gene GeneID:539071|FAM84A:NM_001034659:189_cdna Constitutive 0 NULL GeneID:539071 11 GENE FAM84A MGC127873 family with sequence similarity 84, member A EMBV3_13881 TAGGTTGTGGAAGGAAAGCACCTTCCACCGGAGCTCAGGTGTCTGAGCTGACTCTTTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23953 ACGTGTTTGCGCTAGGCGTGACGCTATACGCGGCGCTGTGTTTGCGGAGTACGTTGCTCA Gene GeneID:514114|SFT2D3:XM_002685212:83_cdna Constitutive 0 NULL GeneID:514114 2 GENE SFT2D3 NULL SFT2 domain containing 3 EMBV3_28326 TCAGCTCTGGGGAGACCTGGGAATCGGTTTCTAACTTGTGACTTAGAAGTGCCCTGGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15829 CTTTGTGCAGCTCATAAAACACCGAAAGAGAATGAAACATTTTTGTGTCATCGGTTTACT Variant GeneID:781884|MOBKL3:NM_001083526:149_cdna 390^581 3 EMBV3_02088 GeneID:781884 2 GENE MOBKL3 MGC137798 MOB1, Mps One Binder kinase activator-like 3 (yeast) EMBV3_22839 TCTTCCATATTTACTGAACCTAGGGAGAATCGTTGGGTCTGCAACTCCTCTGACGCCACC Gene GeneID:613753|LY96:NM_001046517:73_cdna Constitutive 1 NULL GeneID:613753 14 GENE LY96 MD-2 MD2 lymphocyte antigen 96 EMBV3_38665 ACAAGAATAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCC Gene GeneID:539629|MECP2:XM_002699713:95_cdna Constitutive 2 NULL GeneID:539629 X GENE MECP2 NULL methyl CpG binding protein 2 (Rett syndrome) EMBV3_34614 GTTCTGCATGTAGAGCTCAAACCTATGGGTGGGTAAGTCACAAGTGGAGTGAAAAATGAA Gene BVV0102_127940 + 0 NULL GK000023.2:31261205-31278370 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134888 1 XLOC_081573 Coding TCONS_00134888 XLOC_081573 Coding Coding ABT1 23:31275582-31281375 = TSS100468 4973 1 TCONS_00134888_1 275 0.134526442791072 3 0.141919889502762 0.000621124831710054 0.000597880682581506 0.000421961132516917 0.000507480321277411 0.00112251958069708 0.000246157047360947 0.000632838448989357 0.000536757588799405 0.00104835852010221 0.000337245837414947 1.81286515936299e-05 0.000379569612686068 0.000289870115630307 0.000684099662104151 0.000441798493683887 0.00120354016209135 0.00174561156168969 0.00110105854353338 0.000409930454258143 0.000158593805054338 5.66558418634678e-05 0.000435317150612627 0.000542637806284335 0.000588383684571967 0.000395811576743959 0.000430190448288007 0.000323475572061319 0.000206228021784486 0.000112481441299558 0.000216075210916199 NM_001076152.2 ABT1 Bos taurus activator of basal transcription 1 (ABT1), mRNA. 0.0 3842 99.95 0.428715061331188 NM_013375.3 ABT1 Homo sapiens activator of basal transcription 1 (ABT1), mRNA. 0.0 1047 77.00 0.269656143173135 TCONS_00134888_1 sp|Q148M8|ABT1_BOVIN ABT1_BOVIN Activator of basal transcription 1; 0.0 557 100.00 0.996363636363636 0 coding 0 0 0 0 -0.112117549221919 0.40931445754735 -0.0642168186221191 0.292358388948624 CGAGTGCGTCAGAGGCGCGGCGCTTTACGGCTGCCCTGTCTTACGTATCGGCAAGCATGGAGGTAGAGGGTTTGGAGCTGGACACCGCGGAGCTGGGACCTCTGGAAGGGAGTCACCAGAAACTAGAGGCAGAGGAGGAACAGGAGGAATCTGAAGACGCGGCTGGTGGCAGCAAGAAACGGGTAGTGCCGGGCATTGTGTACCTGGGCCACATCCCGCCCCGCTTTAGGCCTTTACACGTACGGAACCTTCTCAGCGCCTACGGGGAGGTCGGGCGTGTTTTTTTCCAGGCTGAGGACGGGTTCGTGAAGCGCAAGAAGAAGGCAGCAGCTGCCTCCGCCGCCGGAGGGAAAAAGCGGTCCAAGTACAGCAAGGACTACACGGAGGGCTGGGTGGAGTTCCGGGACAAGCGAGTAGCCAAGCGTGTGGCGGTCAGTCTTCACAACACGCCCATGGGCTCCCGCAGGCGCAGCCCCTTCCGTTATGATCTGTGGAACCTCAAGTACCTGCACCGTTTTACCTGGTCCCACCTCAGCGAGCATCTTGCTTTTGAGCGCCAGGTGCGCAGGCAGCGTCTGAGGGCTGAGGTTGCCCAGGCCAAGCGTGAGACTGACTTCTATCTTCGAAGTGTGGAGCGCGGACAGCGTTTTCTTGCGGCTGATGGGGACTCTACCCGCCCGAATGGTTCCTGGGCCTTTGCCCAGCGTCCTACTGAGCAGGAGATGAGGGCCCGGAAGGCAGCTCGGCCAGGGGGGCGTGAACGAGCTCGCCTGGCTAACGCTCAGGACCAGGCCCGCTCCAACCGAGGGCTTCTTGCCAAGATCTTTGGAGCCCCTACACCCTCAGAAAGCAGGGGGAACTCCTCACCGGCCAGGAACTCTTGAGGGTCAGAGAGGCCCCTTCCACCTCCTAGCCCAGCCCAGCGTCCTGTCTACCTTATAATGACTACCCAGGCGGACATTCTGTTGTGTTTCTCAAACCAGGAGTCTGGTGAGTTCCTCAGAAGTTTTGTAGGCCTCTCCTCTTCCTCCTTCCAGCTCCTGTACATGCCTGGCTGAGGCACTTAGTTCTTACCAGCATGATTATGCTAGTCTGCTCATGTCTGTTTTACCTTGTTCAGTTCTTGGCTTCCTGCCTTCTGCCCACTGGGACCCTTGAAAAGTCCTACTTTCTGGCCCCAGGAACAGCCTTTACCTTGAATTAGAGTGATAATGGCTAGTCCAGACAGCTGTTTACCAACCACATTATTGGGCAGCAGCAACATCCTTTTTGTTTAGAAAAGATTAATAGGGACAGGGGTTAATGGGCTAGAGTGGCTTGGGAGCCACCTTCAAAATATATTTATAGAATAGAAAAAGATATGTAAATACATATTTTTAAACATACCTTTGTAGTTTATGGCGTGGGGGGGTGGAGATGGTCATTGGATAAGTTCCAACTTGTGTGTTGGACAGAATTCACCCACCTTCACTCCATCTTCTGGACACAGGATACCTCCCTCCGTTTTAACCTGGATAGTTTTCCATCTAATCAGTTTCTTAGGCCATGTTGTTAACACTTATCTAATTCAACATTTACCTATCTAATCAGTTTCTTAGGCCTTGTTGTTAACACTTATTTAATTCAACGTTTACTAAGTCACTATATGAGGACACATGGCCCTTGGTGTAAGTCTTATAGACTGCTAAAAAAGACAGATGTTTAAGAAATAAATGTATAGAAGTACTGTAGGCATCATGCCAGATGTATATAAGAGGTAGAGTGAGGCCATGGGAAGGCCTGATTGATTCTATCTGGGAAAGTCAGCAACATCCTGAGAAGTGAACCAAAGTCTGAAAGAGCCTGATAAACTCCTATAATTGCAAACAAAACTCCATGGATGACGTGTTGGGTTCAGACTGTTGTGAAGGTGGGCAAAGCCTAGGAGGTAGTTATGCACACATAATGTCCTTCTGGTGCATTTATACATTTTGTCTATGCTTAGACAAGGGAAGGTTCACAAACAACATGCAAAGCAGCTCTGGAGGTGATAGAATGCATGTAAGCCACTGATGGGAAATGAAAACTGAGATGTCAACAAAAAACTGAAAAATATCTATACACAGCCTCATAATAGACTAAAATTCTGGCTATTTAAACTTACAGGAAGTGTTAGAGCAATAATAGTAAAGTCATTTGAGTTTTGTTTGTGCCATTTATTTTCTTAGGTTCTTTTTGTTCTTTCTGCTTAACTGTCATCAATGTAATTATCATTGTGTTCTTTGGGTCAAGTGGATTCACCTACTTTGGCTCAAAATAACCAAATTTTATTAAGATCTCAACTTGATAAGTGCAGTTTATTTGGGAGGAAAGAAATGAATTATGATCTGTTAGGTGTAACATTTTTCACAGTCCTCAAAACTCAGCACACAAACACATCTGTGCTCATTTCATTTGGGTTTATTCCATGTGGACTCTTCATGATGTCTTCCATGTGAACCAGGAAGATCCAGTTTCAGAATCTGACAAGCTGTTATATTCATTTATTCAAAGTTCTGAGTATCTGTTGTCACTTCTCCTACATAGAGAATACGAAGATGAAGAAACTTAAGTTACTAACAGTAAAACACACGTAGGGCTTAATTTTTTGAATGAATGAACTTGTGTTTCCAGATTGATGTTATATATAAGGATATTCAAAGTCAGCATTTCAGTCTCAAGTTTAAACAGTTCTGCATGTAGAGCTCAAACCTATGGGTGGGTAAGTCACAAGTGGAGTGAAAAATGAAAATTAGAATGGGTGGAAGGAAATCGATTTCCCAGGAACTATAATTGTGATTCCCTCACTTCTAAGCCCTTTGAAAGGAAAATACCTTTTTTATACTTCCAGTTTTGTCCCCATTTGAACAATGCTTAAGTTTTTTATATGAGTTAACTTGTTTAATACACAAGCATACAAAATCATATCATCTCCACATTTCCATCATTAAAATTAGGCTTATATGTGACACAAGTTGCTCCTTAATGTTTTTTATTACCAGCATCTTCCCCAGTTGCTTTGCCTATGTGTATATGGTAAATGTTTATTGCATGAACATCATGTAACATATAGTGAAGAGTTACTGCAAATATGAATGGATTAATCTAATACCAAGTGTTGCAAACTGGGTGATACAGCACTCAACCATCCCCTATATGATTAGACTGTTAGACTAAGTTAGGAACCTATTGTTGCAATGAATTCTTTGAATCAACTTAGTTACACACCATCCAAGAAGGTAGGACCCTGCATTTGCAGAAAATGATAAATTGGTAAGATGAGGAATGGGATTCTGCTAAAGAGAGTAGGAGGGCTCTTGATAGGTGTGTCCAGGCATATGAAATTCCTGAAAATGTCCAAAAATCACAAAGCACTCTTCCTCAGTTTACTTTTACATTGTTCTTCTTATCTCTGGAAGTAGTCTTGTAACAATACTATAGAGTTGAAAGGGGAAAAACCCTTTGTCTAAGCCTCAGGAATGTGCCGTTTCCCTAAGAGTTAATGTTTCAGTGGATTGCTTGTGGTCCCTGACTTAAAATGGTTCAGTGTTTAATTTTTTATCTTCAGTGCAAAGGTGGTGCACATTCAGTAGAAACTACTTCCAATTTTGAATTTTGATCTTTTCCATGGCTAGTGCCATTGATAAGTGGTGTGATACTCTCCTGGAGCTGGGCAGCCATTCAATCATAAGGGTAAATGATTACTTTTCACTCTCAGTACAGTATTCAATAAATAATATGAGATAATCAACACAGTTATGAAATAGGCTTTAGGTTAGATTTTGCCCAACTAATGAAAGTGTTCTGAGCACATTTAGGGTAGAGTTGGTAAATCATCTGCCTGCAATGCAGGAGACCCGGCTTTGATTCCTGGGTCAGGAAGATCCCCTGGAAAAGGAAATGGCAACTCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTAGTCTGATAGATTTGGCAACTACACCACCACCACCAGGCTACATTACGCTGTTCAGTAGGTTAGGTATATTAAATGCATTTTGGAATTACAGATGCTTTCAACTTAGATGGGTTTATTTGATGTGACCCTATCCTCAGCAGAGGAAGATTCTGTGTTAATTAGATTTCCCAACCTTTAAGAGGGAGTCCCACCTCCAACTCCCAGCAGAAGTGGTAATTTTCTTCCTTTTTGGTAAATGTGTCCACCATTCTCACACCCACACAAAGCTGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGTGGTTCCATAGATGGCAGCCCACCAGGCTCCTCTGTCCCTAGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCACCACACACAAAGCGATTTGAGTAATAAACTCAGCCAGGGGGAATGAAATGGAAAATAATCGGTTAAAGAGTTTGCTTTTCTAGGCTCTAATTTTTTTTTTAATATGTTAAAATGCGGAATACCTGTGAGACTTGAACTAAGCTTCCGTGAACAGCAATGTAAAGTGTTTTGGCTTTCCCTTTCCTCAGCCTCCCCTCTCAGGCGTGAAATCACTCAGGAGGATGCAGAAGAACTTACAAAGGAGCCTGGCGCAGGCACAAACACCAGTTGTGTCTCAGGATACTGCAGGATATGGGAGGGAGTGGTTGGAATTACCCTAGAAACCACAGGGGAAGGGTAAAAGGGGAGGGAAGGACAAGAAAATGTGTTTGAGAAGCACATCTGGTGTACAAGGGCTTCAGTGCGTGAGGGCTTCAATGGGTGGCAGCTTCCAGGGCGAAGACCAGGCAGTGACCCAGGACTGGTCTCAAGGGACCTGAGAATAACTGGGACTCTTGTCAGTTCCTGCCCACTCATCCCACCCGTGAGCTACTGTGTGTGATTGAGTTAAGGGTCTATATTTTAAATATATTTTTATATATTTATATAATATATACTAT EMBV3_13008 ATAAGCCAGCAGGTCTGCGTGAGCCTGGTGAGTATTGCCTGGTCCTTTGGGCTAATCAAT Gene GeneID:515369|LOC515369:XM_002687352:43_cdna Constitutive 0 NULL GeneID:515369 5 GENE LOC515369 NULL similar to olfactory receptor Olfr286 EMBV3_17185 TCAGTCAAATTCTCCTTCAATCAGTGGGTCCTAGAGCAGGAAACATCTGGGAGGCTGCTC Gene GeneID:539101|JAGN1:NM_001046450:181_cdna Constitutive 0 NULL GeneID:539101 22 GENE JAGN1 MGC133777 jagunal homolog 1 (Drosophila) EMBV3_21591 ATGCCTCCAAGCTGCAGTTCATCTTGGCAGGACCAGTGTGTGGAGATCACTGAGGAGTCC Variant GeneID:514327|DCTN3:NM_001075660:25_cdna 272^414 2 EMBV3_02857 GeneID:514327 8 GENE DCTN3 MGC142778 dynactin 3 (p22) EMBV3_28477 TTGCAAGCTTCTGTTACTAGTGTGTGATAGTCATCCTGCCTCCGACCTCCCGTCTCATTC Gene GeneID:535434|LOC535434:XR_084091:99_cdna Constitutive 0 NULL GeneID:535434 27 PSEUDO LOC535434 NULL similar to Storkhead-box protein 2 EMBV3_43045 GGTGGACTTGTGCCCCAAAGAAACATCTTGTCTGAGTTAGAATCCAGGCTTAGTCAGGCT Gene BVT0102_160907 - 1 EMBV3_09816 GK000020.2:25523383-25588626 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116593 1 XLOC_070759 NonCoding TCONS_00116593 XLOC_070759 NonCoding NonCoding - 20:25544079-25545092 - TSS87061 1013 1 TCONS_00116593_1 37 0.604146100691017 1 0 0.000376069827028442 1.98389606647392e-05 9.1352358595525e-06 0 1.46214619353897e-05 6.7091848325978e-05 5.75687398490149e-06 0 1.55777581868137e-05 0 0 0 0 0 0 0 0 0 2.12367426780312e-05 2.83965901562373e-05 0.000305670254460045 0 0 0 0.000123112067506148 0.000146056092678642 0.000190871030557053 0 0 0 XM_594211.5 LOC516074 PREDICTED: Bos taurus nuclear pore glycoprotein p62-like (LOC516074), mRNA. 2e-23 114 73.71 0.189536031589339 0 noncoding ACATCCTGCCCAGCCCCACCTGAGAATGACTACAGGCAGGAAGAAGTTACCACATCCCCTCCAGAGGCTGACCAGGCCCAGAACTAGAAAATGTTTGAATTCACTTCTTCCCTTTTTAGTATAAAATCAGGCTGAGGACTTCCCTGGTGGTCCAGGGCTCGGCACTTCCAATGTAGGGGGCCCAGGTTCAATCCCAGGTCAGGGAGCTAGATCCCACAAGCTGCAACTCAGAGTTCGCATGCTGCAACTGAAGATCTCGAATGCTGCAACTGAAGATCCCACGTGCTGCAGCAAAATTTGAAGAGCCTGTGTGCCTCAACTAAGACCTAGCTCAGCCAAACAAATAAATATTAAACAAACAGTAAGAAGCCTGACTAAGCCTGAATTCTAACTCAGACAAGATGTTTCTTTGGGGCACAAGTCCACCATCTTCTCCATTTGCTCTCTTTCTGAAAAGTCACTATTCCAACAGTTCTCTCAATTTACTGACCTACTGTGCATGTGGGGAGTTGTAGGAACTTGGATTGAGTAACATTTTAAGCTATCATTGGAATGGTAGGTTTCCCCTGAGTTTTCTACTCCCTGGCCTCAGCACTGCTCTTCATCCTTCCCCTAGCTCCTAAAAAAGAAAAAATAAGCTATCATTGGAGACACACAATATGCTTGTTTGTCTCCAAACACATTGTAGGTGTTTGTTTTGCTTCTAGGCGTCATGGGTCTCTGTCTTTCCAGCTTTCAATATCACTTTCCTCACTGCTTGATGCCCAACCACTAAACCAATGTCACAAGTGTGGAGTTGTCATTTTCAGCTGCACTCCACTTCCAGTATGGAATGTGCAATGGCTTAAAAAATAATAAAAGTTTATTTCTCAGTCAAAAGTCCAATGAAAGTGTTCTTGATTGGTGGGAGTTTTACTGTAAGTAAAACTGTAAGTAAAGCAGCACTGTAAGTAGCGTTTCTGGAATTCTTGTGGGTCTGCCCTCTTTATCATAAGTTTTCAAAGTCGGCATGC TCONS_00114858 . 5' 20386 TCONS_00114858 . 5' 20386 EMBV3_11910 CTTAATTGGCCAGCATTGTCAATCTCTGAGGAAAGAGTCTCTGATGATAAGCATCTTACC Gene BVV0102_450742 + 1 EMBV3_20198 GK000009.2:45705641-45737451 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22432 GGATGCATACTCACAGAAGTTGATCCTCAAGAGAATTCAGATGATAATAGAAACAGGATA Gene BVT0102_322658 - 1 EMBV3_37218 GK000017.2:45020365-45035093 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075286 TCONS_00075284 TCONS_00075283 TCONS_00075285 TCONS_00075282 1 XLOC_046540 Coding TCONS_00075284 XLOC_046540 Coding Coding ZNF26 17:44995401-45025451 j TSS56810 3664 1 TCONS_00075284_5 535 6 0.87826549968385 0.0002677029600239 0.00106464664951672 0.000433786978235573 0.000133536103796133 4.45092722382147e-05 0.000492079369374942 0.00029219901984538 0.000768148638758965 0.00057478092287294 5.50395294705092e-05 8.19046866282207e-07 0.000148793703558323 0.000117126986224843 6.59320994374483e-05 6.14834232037189e-05 0.000225951534916836 0.000247740891828293 0.000270206739438631 0.000235383535030277 0.000516389901457013 0.000394623790602638 0.00031672141075175 0.000357314633186053 0.000292212181922329 0.000396620829725104 0.000684269707733 0.000540489842176053 0.000267615860628813 2.31712006532274e-163 5.3049752725329e-08 XM_005217700.1 ZNF26 PREDICTED: Bos taurus zinc finger protein 26 (ZNF26), transcript 0.0 5330 99.27 0.819596069868996 NM_019591.3 ZNF26 Homo sapiens zinc finger protein 26 (ZNF26), transcript variant 2, 0.0 2320 82.64 0.608897379912664 TCONS_00075284_5 sp|P17031|ZNF26_HUMAN ZNF26_HUMAN Zinc finger protein 26; 0.0 999 89.91 0.998130841121495 6 noncoding 0 0 0 0 -0.118084208396048 0.447252480588782 -0.0147276776242108 0.769361223463147 ATGGTCTGCTTCACAGTCCCTTCATCGCCCACCACCACCGGAGGCCTCTCCCGGACCCCCAAATCTCCCTCCAGACTCCCACACCACCGACACTTACACCCAACCCTACAGACCCCAGTCCTCCAAACCTTGCCCCTCATCCCGCTCCCTCCCGCTCCGCTCTGCTCTGCCACCTCTAGCCCTTACCCCGCGCCGCCCCGCCCCCTATGCCGCCCTATGCCCCTCCCCCACAGCCTCACCCGCAACGTACCCCCGCACCTGCACCGGAATCGAAGCCTGCGCAGCAGGAAAATCCTTCCGAGCCTCCCCCAGTTCCCGGCTCCGGAGCTGGTTCGTACACACGCCGGCGTCGCCCCAGGCCGGTCCGCGCCGGGGTCATCACACGGCCCCAGTCGGACGCAGAGGCCACAAGCAGCCCACAGCCCCGTCCCCGCCCCAGCCCCAGCCCCCCACAACCTTACCCCTCTGGTCTACAGAACCGAGGCGGACGCGGCTGGGCCTCGGCAGTGTCCACGCAGAACTACATTTCCCAGAGTCCCACTCGCTTTAGAACTACATTTCCCAGAGGGGCTTGCGGCGCGCCCCCCTGAGGGACAGGTGTGCTCTTTCCTGTTGCAAAACGCTTTGTGGCTGAGCTGGGCGGGGCGGGGGCGTTCTGTTACAGAGACTGCGGAGCTAGCTGAGACGCGAAGTTATCCTGGCCCAGAAACGTCCTGTGCGAAACAGGATCTTGACCAGCTGAGCCCCCACGGTCGATCCCGGCGTAGAAGCAGCCAGCCCGGCCTCGGTCCCTCCTGCATCAGAGCTACAGAGCGCCTGCACGAAACAGCCCGGGATGGCCACCAGGTTCCCTACAGCTTCGTGTTCGGAGTTGTTGTCATTCACGGATATATCTATGGAGTTCAGCTGGGAAGAGTGGCAGCTGCTTGATTCTGTGCAGAAACACCTGTACCGGGATGTGACTCTGGAAAACTATAGTAACCTGGTGTCTGTAGGGTATCATGGTACCAAACCTGATTTAATCTTCAAGTTGGAGCAAGGAGAAGAGCCATGGATCATAAACTTCGAGGTTTCCCATCAGAGCTGTCCAGACGGTTGGGAAGAATGGTACCAGAAAAATCATAATGAATTTGAAAGTGTTCAGAGAAGCTATGCTTGTAATGCATTTGGAAAACTTCATCTGAGCAAAACCCACATTTCTTCAAGACAAAGACTCCTTAAATATAAAACACATGGAAAAAGTTTGACACAAAACTTAGCTTCAGCCACAAGCTGTCTAAGAAAGAATACTGATCAATTTCATGGGTATAAAGAATCATATTTTATTAAGCACCAAAGAACTCATAGTATAGAAAAAAACTGTGTATGTAACGAATGTGGGAAAGCTTTTCGTTGTAAATCACAGCTCATTGTACATCTCAGAATTCATACAGGAGAGAGACCATATGAGTGCACTAAATGTGAAAGAGCCTTCAGTGCCAAGTCAAACCTCAATGCTCATCAAAGAGTCCACACAGGAGAAAAGCCCTACTCTTGCATCGAATGTGGGAAAGTCTTCTCTTTCAGGTCACAACTTATTGTCCACCAGGAAATTCACACAGGAGGGAAACCTTACGGGTGCAGTGAATGTGGGAAAGCCTACAGCTGGAAATCACAACTGATTTTACACCAGAGAAGCCATACAGGAGTGAAACCATATGAATGCAGTGAATGTGGGAAAGCCTTTAGTTTGAAGTCACCATTTGTTGTGCACCAGAGAACTCATACAGGAGTGAAACCCCATAAATGCAGTGAATGTGGGAAAGCCTTTAGGAGTAAGTCATACCTCCTTGTTCACATTAGGATGCACACAGGAGAAAAACCCTATCAATGCAGTGACTGTGGCAAAGCTTTCAATATGAAGACACAACTTGTTGTGCATCAGGGAATTCATACAGGAAATAATCCTTATCAATGCAGTGAGTGTGGGAAAGCCTTTGGCAGGAAGGAACAGCTCACTGCACATCTGAGAGCTCATGCAGGAGAGAAACCTTATGGATGCAGTGAGTGCGGGAAGGCTTTCAGCAGCAAATCATACCTCGTTATACACAGGCGAACACACACAGGAGAGAGACCCTATGAATGTAGTTTCTGTGAGAGAGCCTTTTGTGGGAAGTCACAGCTAATTATACATCAAAGAACTCACTCAACAGAAAAGCCCTATGAATGTAGCGAATGTGAAAAAGCCTATCCCAGAAAGGCATCACTTCAGATACACCAGAAAACTCATTCAGGAGAAAAACCGTTTAAATGCAGTGAGTGCGGGAAAGCATTTACTCAAAAGTCATCTCTCAGTGAACACCAAAGAGTTCATACAGGAGAGAAACCATGGAAATGCTCTGAGTGTGGGAAATCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGAAAAACTCATAAGTGAGAAATCAGAACAGAATAAATTTGGATGCATACTCACAGAAGTTGATCCTCAAGAGAATTCAGATGATAATAGAAACAGGATATATAAGTAGGAACACCTAAAAGTACATTCTAATCAAATTAGTCATGTGGGAGAGAGACCAATCATATTTGGAATGAATATGCAAAAGCTTTCAGAAATAAGTCATGCAAATCTTTATACACAGGAGAATGGTTGAAGGAATAAAGAGCAGTAATGGTATCATATACAGTAGCATAATTATGAAGATTTAATTTGGGAAATGCATATTAAGTCCATATGAATTTAATAAATCAGGAAAGCACTTTTCCACAGAAGATGTGTTACATGGGGAGTCATGTTCCAGATTTGATGCTGTTTTTGAGTGAAGAAAGTCCTTGGTGGAGGATAAAGTAGTTTTGTTTTATTTTTTAATATGTAACTAATAGGAAAATAGCAAAGAACGTATTTTGAAGGTTCAGGGGCATGGAGTGTGACTTTCCTGAGTAATACTGCATAGCATTTTTTTTAATTTTGGTATTTTATTTTTAAATGTAACTTGTTATATTTGATAATTTGTGGAATAACATCTTCCAATATTCTTTATATTAAATGCTAAGTATCAGTATTGTCTCTTTATTTCTTAGCAATATAACTAAAATAGTTTGAATTTTAATAAATGAAAGGATTTTATCTTACTCCAAATGATTTTACTTATTCAATAAGTGGGTCTGTCCATTTTTACAGGGCTGCTTTCCAAGAGCACTCATGGTAATGAAGATTGATTGTATTTAGCAATTCGGTGTCTGCTCCCTATTTATTGATAACAGTGGCTTAGAATTCTCTGGAGAGATACTCCTCCTATGTTGTGCACATCCTTGTGGTGTATCTCTCAGGGTGTCCTTCCCACCAGCCATAGGTGAGCATTCTGCCACGGTTGAGTCATGATGACATCTTTTCCAGGAGTTTGAGTCTCTAATTCAGTCTCACATGAACCAGAAGGGAAATATCAGAATTCATTCTTGTACCACAGTTTTAAGACCATCAAATAGTTCCTGCTATTTCAATTTCTCAGGATAACTTTGGATATTCTGAACCTAATTTTCTGGTGTTCTGTGCGCTTCCTCATATTTGCAATAAAAATATTATTTTCTGCTAATGTTAAGAAGAATGAGTTCTATTTCTTGTAACTGAAAGGCTTTAATTGGTAAATAGTGTCACTGG EMBV3_25474 TGGTGCATCTCACATTGCAGATTGCTTCCAACCATAGGCAGTAGGACCTTGTCTCAGTCC Gene BVT0102_027593 + 1 EMBV3_09504 GK000004.2:24216308-24492020 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181015 TCONS_00181012 TCONS_00181011 TCONS_00181013 TCONS_00181017 1 XLOC_110524 NonCoding TCONS_00181017 XLOC_110524 NonCoding NonCoding - 4:24411191-24431631 - TSS135610 272 3 0.986838886442585 0.00193372461202469 0.000272247366178333 0.00115088434660724 0.00013765982228108 0.00026901691883013 0.000346010361980271 0.000397447219884597 0.00095839140296657 0.000348094421650945 1.95047110807058e-124 0 0 0 1.42566694647323e-05 0 0 0 0 0.0012256612133038 0.00117569672695677 0.000182108737629366 0 0 0 0.000222572687926919 0.000815612821198465 5.03391151019893e-05 0 0 0 XR_230835.1 LOC101907713 PREDICTED: Bos taurus uncharacterized LOC101907713 (LOC101907713), 2e-110 401 100.00 0.8125 0 noncoding 0 0 1 1 -0.0355821564863838 0.812426691160793 0.0148689008551689 0.771110778617133 GTAAAGGAAAAATATAAAATAAGGCTGAAGCAAGACAGCACATCTGTTACGAGGCTCCCCTCCATCCATAAGATAAAGCACTGGAAGGGCTGTGTGGGGTCCATGGGTGAGTGCAGCTCTGCTACACGAAGCCGCATGGACTGAGACAAGGTCCTACTGCCTATGGTTGGAAGCAATCTGCAATGTGAGATGCACCATCCAAGTTCACACTCACCTGAACTGAGTTGAGTCTAGTGATCAAGGGCTGGAGTCTCTGCAATTTGAAGCTGTTG TCONS_00183391 r 3' 13244 TCONS_00183391 r 3' 33683 EMBV3_30721 TCTTCAGAGGAAGAGCCACACCCAGAATTTGGTGCACGATCCAAGCATCTTAGTGGCGTT Gene GeneID:281151|EXT2:NM_177496:21_cdna Constitutive 0 NULL GeneID:281151 15 GENE EXT2 NULL exostoses (multiple) 2 EMBV3_01144 GGCCAGAGGCCACCTGGACCTGAGACCTAGTATCCTGTAAGAGTATCATCATAAAGTGCA Gene GeneID:535297|DST:XM_002697192:260_cdna Constitutive 0 NULL GeneID:535297 23 GENE DST NULL dystonin EMBV3_10685 CAGCCGCATGAATCTTACTCTCTGTGCCCAGCTTGTTGGCACCTCATTTCTGAGTGGGTA Gene GeneID:514553|LOC514553:XM_002685922:49_cdna Constitutive 0 NULL GeneID:514553 3 GENE LOC514553 NULL similar to olfactory receptor Olfr419 EMBV3_26526 AATGTGTCTGAAACTGAGGGTCCCAGCAAAGGGGCTGGTGACTTGACGGGAAATCAGTCA Gene GeneID:524663|LOC524663:XM_002696906:399_cdna Constitutive 0 NULL GeneID:524663 22 GENE LOC524663 NULL similar to KIAA0527 protein EMBV3_28954 ACTTGTCCAAGGTTGCATGGCCTTAAGTGGCATAGCTAGGATTTGAACTGAGTCTGTCTG Gene GeneID:523451|LOC523451:XR_084562:451_cdna Constitutive 0 NULL GeneID:523451 10 PSEUDO LOC523451 NULL similar to tetratricopeptide repeat domain 9 EMBV3_20115 GGTCAGGGGCTTGCGAAGCATCTTTAGGGCCTTTTGCAAGAATTCAGTCCATCAAGAGTC Gene BVV0102_059269 - 1 EMBV3_01254 GK000001.2:136071077-136182275 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19907 GAACCTGGCTATGCTAAAGATGGGCTTCCCGGGAGTCCCGGGCCTCAAGGAGAGACAGGA Gene GeneID:521058|COL22A1:XM_002692600:370_cdna Constitutive 1 NULL GeneID:521058 14 GENE COL22A1 NULL collagen, type XXII, alpha 1 EMBV3_38255 CTACAGATTCCACGGCAGCTGCTGTGCCAGGTGATCACGTCTGGCTTATCGATGTTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02322 TCTTGCTGGTCCTTCCAAATTTCGTGGATCCATGCCTGGGATGCGCAATTACCTGGCAAT Gene BVT0102_443943 + 1 EMBV3_36819 GK000018.2:52446107-52462833 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083956 1 XLOC_051412 Coding TCONS_00083956 XLOC_051412 Coding Coding ZNF234 18:52457551-52486897 j TSS62983 1857 1 TCONS_00083956_6 516 6 0.936922814789572 0.00113720271785327 0.00137183171490696 0.00175560818575144 0.000941054293739693 0.00287164015877859 0.00121807334723288 0.000761091850076929 0.00218415455556796 0.00244478891789072 0.000275096055374423 2.21398134864082e-05 0.000148873470915134 4.50233571968988e-05 0.00290435444790856 0.000298496072188681 0.000576039226734956 0.000526058119240885 1.32227591586064e-42 0.00767970682367191 0.00191129406775925 0.00225870988766598 0.00172595810092276 0.000111083727997421 0.000196462649090545 0.0014587310770973 0.00481526271561362 0.000120848646233518 4.34922474201223e-25 5.95051897583405e-06 4.04715223991393e-41 NM_001102350.1 ZNF226 Bos taurus zinc finger protein 226 (ZNF226), mRNA. 0.0 2167 90.73 0.845988152934841 NM_001032372.1 ZNF226 Homo sapiens zinc finger protein 226 (ZNF226), transcript variant 0.0 1148 79.34 0.72428648357566 TCONS_00083956_6 sp|Q9NYT6|ZN226_HUMAN ZN226_HUMAN Zinc finger protein 226; 0.0 683 65.15 0.998062015503876 7 coding 0 0 0 0 0.0276524984440965 0.789719599922837 0.0131838370043483 0.793071051508323 GCGGGCATGTCAGTTCCGCGTCTTGCTGGTCCTTCCAAATTTCGTGGATCCATGCCTGGGATGCGCAATTACCTGGCAATCGACTTAGGGGAAACGAATCCTCGGCGCAGAGTGCAGACTCTCAGTACTCTCTCAAGACAGTTCTGACCTCCTAGAACCTGTATAATTCAGGACTGTGCCCATCCCCAGGCATAGGAAGAAACATGACCACATTTAAGGAGGCAGTGACCTTCACGGATGTGGCTGTGACCTTCACGGAGGAGGAGTTCAGGCTGCTGGACTCGGCCCAGAAGAAGCTGTACCAGGATGTGATGCTGGAGAACTTCCGGAATCTGGTCTCAGTGGAAGAAAAGATCCAAAGTGAGATGGAGACTATTTCAGAAGTAGGACCACATGAAGAGCTTTCCTGCTGGCAAATCTGGCAACAAATTGCTAACGACTTAACCAGATGTCAAGACTCCATGATAAATAATTGTCAGCTCCACAAACAAGGTTATTCCCTGCACCAGGTTGGGTCAGGACTATCTATTCAAATTTCTGAAGATGAGAACTATATATTAAATGAGAAAGCAGGTGGTCCTGGTGATACTGGAAATCCAAGGTTTGCATCTTTGAGAGCCCGGGATTCTTGGAGAAAAAGTTCCTTGACTGAGTCACAGAATTACCAGAATAGATACCAGGAAATTTCCACGCAAAGTAAACTGTGTCGGTGTAAAGCGGATGTTGACAGCATTGGTCGGATCTCATACCACCTTGATGATCGAGGAGTACACAAGAATGAAAAGTCTTATTGCCACAATGATTATAGAAAAGACAGCACGGTTTCCACATTGGATCAGAATAGTATGATTCACACAGGACAAAAACCTTACCAGTGTAATGAATGTAAAAGAACCTTTACCAGCCTTTCTACCTTTGATCTTCACCAGCAGTTACACTCAAAAGAGACCTCTCACGTGTGCGATGAGTGTGGAAAAGGCTTCCGTTATAGCTCAGTTCTTCATATTCATCAGAGAGTTCACATAGGAGAAGAATGCAGTGTGTTTGCTGAGTGTGGAAAGGAATTCCATCAGAGCTCACAACTACAAACTCATCAGAAAGTCCACAGCATAAAGAAACCATTCACATGTGAGGAATGTGGGAAAGGCTTCAGTCGTCGATCAGCACTTAGCATTCATTGTAAAGTCCACACGGGAGAGAAACCTTACACTTGTGAGGAGTGTGGCAGGGCCTTCAGTCAGGCCTCCCACCTTCAAGACCATCAGAGAGTCCACACCGGGGAGAAACCATTCATATGTGATGCATGTGGTAAGAGCTTCAGTCGGAATTCACACCTTCAAGCCCACCAAAAAGTCCACACTGGAGAAAAGCCATACAAATGTGAGGAGTGTGGGAAGGGCTTTAAGTGGAGCCTGAACCTCGACATGCATCAGAGGGTCCACACAGGAGAGAAACCATATAAGTGTGGGGAGTGTGGGAAGCACTTCAGTCAGGCCTCAAGTCTTCAGCTTCATCAGAGTGTCCACACTGGAGAGAAGCCCTACAGATGTGATGTGTGTGGTAAAGTCTTCAGTCGGTCTTCACAACTGCAGTCTCATCAGAGAGTCCACACAGGGGAGAAACCTTACAAGTGTGAGATGTGTGGTAAGAGCTTCAGTTGGCGCTCCAATCTAACAATTCATCAAAGAATCCATGCTGCTGATAAATCCTATAAAAGTCATAGGGGTGGTAAGACCATCAGAGATTCAACTTAGAAAAGTTCATTAAAATGATTTTTTAAAAACTCAAGTGTCATGTGAATGCTTCCAGTTGTCAAGTTCAAAAGAAAAAAAAAATCATTTGTTTCATTAAAAAGTC EMBV3_17431 GTTCTCACAGGAGAAGATCAGTGCACATCCTTCTACTCTGCCATGTTAGTACCACATGGG Gene BVT0102_003445 + 0 NULL GK000001.2:103808270-104020146 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009766 1 XLOC_005319 NonCoding TCONS_00009766 XLOC_005319 NonCoding NonCoding - 1:103980860-103981480 - TSS6843 620 2 TCONS_00009766_2 85 0.490322580645161 1 0 0 0 0 0 0 0 0 0 0 6.63628053262699e-05 0 0 0 0 0.000237396438021758 0 0 0 0 0 0 0 0.000266343638843142 0 0 0 0 0 1.56600074808238e-05 0 XM_005221819.1 C21H15orf40 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf40 (C21H15orf40), transcript variant X1, mRNA. 8e-101 370 86.54 0.501612903225806 0 noncoding 0 0 0 0 -0.0668592138752445 0.590066413374549 0.0566451365396645 0.410909452478206 GTTGCAATATTGGAGTTCTCACAGGAGAAGATCAGTGCACATCCTTCTACTCTGCCATGTTAGTACCACATGGGCTATATATAAAGCTACATATATAAATGAAATATGTTCCTGGGTTACTAAATTATGTCTGATCTTATAAAAATGATATTGATTAGGTAATGATTATATAGGACATGCATTAAATAAGAGAGTGGGAACAGGTTATTTTACAAGAAACAGTAGCCTCTTCATAAGGTGAAAGTCATTCATTCATGTCTGACTCTTTGCCACCCGATGATCTGTACAGTCCATGGAATTCTCTAGACCAGAATACTGGAGTGGGTACCCTTTCCTTTCTCCAGGGGATCTTCCCAACCCAGGAATCCAACCCAGGTCTCTGGCATTGCAGGCGGGTTCTTTACCAGCTGAGCCACAAGGGAAGCCCAAGAATACTGGAGTGGGTAGCCTATCCCTTCTCCAGAGAATCTTCCTGACCCAGGAATCAAACCAGAGTCTCCTGCATTGCAGGCAGATTTTTTTACCGACTGAGCCATCAGGGAAGCCTTAACCTCTTCATACCATTAACCTCTTTAACCTTAACCTCTTTAACCATTCATTAAAAATTAGTTAATATTAAT TCONS_00001735 . 3' 776133 TCONS_00001735 . 3' 776752 EMBV3_30917 TCTTCCGCATTGGCAGGCGGATTCTTTACCACTGAGCCATGTGGGAAGTCCTGCTTGGCA Gene BVT0102_237988 - 1 EMBV3_14229 GK000018.2:63928471-63941395 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091826 1 XLOC_056597 NonCoding TCONS_00091826 XLOC_056597 NonCoding NonCoding - 18:63933392-63934256 - TSS69172 864 1 TCONS_00091826_1 73 0.21412037037037 1 0 0 4.65204573137074e-05 6.42638932257388e-05 0 0 0 0 0 0 0 2.64952047783193e-06 0 0 0.000228666545289069 0 0.000152844788206851 0 0.0012487355709302 0 0 0 6.8709823380813e-05 2.12362238080329e-05 0.00086830838161867 0 0 4.06885319465172e-05 0.000511386327123947 0 0 XM_001252705.3 PTRH1 PREDICTED: Bos taurus peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) (PTRH1), transcript variant 1, mRNA. 2e-47 194 87.20 0.1875 0 noncoding CACGGAGAGCGCCGGGGCTCGGGGCTCTTCCTGTAGCCCCTCTGTCCTCCCGAGCCTTTCATTTGCCACTTACTGAGGGGCTACTGTGTGCCAAGCAGGGCTTCCCACATGGCTCAGTGGTAAAGAATCCGCCTGCCAATGCGGAAGACCTGGGTTCCTTCCCTGGGTCCGGAAGATCTCCTGGAGGAGGACGTGGCAACCCACTCCAGTGTTGTTCCCTGGAGAATCCCATGGACAGAGGAGCCTGGCGGGCTAGAGTCTGACAGGACTGAGCCACCAACGACAGCACAGTTCGCCGAGCACTGTTGCAGGCGCTGGGGACAACTAGGAACGTGCCAAAATCGCCATCCGCGGAGCTGAGGTTCCAGTGTGGGAGAAATTTAATAGGAAAACAGATACTGATAAATACTGGGAATTGATACACGTTATAAAGAAAAGCAGAGCACAAGGCCATTCTTTCAGTACTTGGTTCTTTTACACCCTCTTGTTCCTATTCAGCGTGTGTCTGAAAATGTTTAATAAACTAGCTCTCGTCCAGTCATGCCTCACCTTTTCTGAAATCGCGTTATAGGATATGGAGCTTCAGAGTAACTTCTCATCAAAGGAACCAATGACAAAAACCTGGAAATGTTTATATGGAAGAAATGTACAAAATGCAAATGTTATATTTACAAAGATATTGAAACACTGTATATAGTAATAACATGTTGAATATAAACAACATGGTTAAAAGTAGAGAAATACATTTGTTTGAAATTATAAAACTAATTGTGTGATACTGAAGCAACCTGTATTTCTGGGGCTTTGTTTTTCTTAAAGGGGGAATTAATCTGTTACAACTACATTGCACTATTGGAAAGCTGT TCONS_00087643 . 5' 321 TCONS_00087643 . 5' 321 EMBV3_40723 CCGCCGGAGCCTCAAGACACCAGAAGAAATAGAAAGATTGACAGTTGATGAAGACCTCAG Gene GeneID:537521|PPP4R4:XM_002696823:609_cdna Constitutive 0 NULL GeneID:537521 21 GENE PPP4R4 NULL protein phosphatase 4, regulatory subunit 4 EMBV3_36970 TGTCAACCTGGCAATGAGTTAGCTTCACCTGGAGAGATGTTCAGATGTGCTGATGCTGGG Gene BVT0102_237021 + 1 EMBV3_38143 GK000016.2:2339357-2557487 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06836 TGTTGGCATAGATCTGAACACAGGTGAGCCAATGGTAGCAGCAGATGCAGGAGTGTGGGA Gene GeneID:538090|CCT6B:NM_001034642:277_cdna Constitutive 3 NULL GeneID:538090 19 GENE CCT6B MGC127900 MGC140065 chaperonin containing TCP1, subunit 6B (zeta 2) EMBV3_19622 GGAACCTAGGAAAGCACAGTGTGACTGGAGATCTCTGGATGACAGGGCGCAGCCGTGTGT Variant GeneID:517515|CCDC51:NM_001015619:184_cdna 234^312 2 EMBV3_23313 GeneID:517515 22 GENE CCDC51 NULL coiled-coil domain containing 51 EMBV3_41338 ATATCAGTCACGGATGAACATGGAATTGAGGGGGAGCTTGTATATGTGAACTACGCTCGC Variant GeneID:536439|NAALAD2:XM_002699027:18_cdna 382^483 1 EMBV3_06828 GeneID:536439 29 GENE NAALAD2 NULL N-acetylated alpha-linked acidic dipeptidase 2 EMBV3_12114 GGAGCGGTGGAACCCCACGCAGAATGTCAGCCAACGTGGACGCCTCTGTGATGTACAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02841 TCTTTACTGCCTCTTGCCTCCTCCGCTTGGGAGAAACCCAGACAAGGAAACCTCATCCAA Gene BVV0102_218209 + 0 NULL GK000003.2:50172985-50242936 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29010 CCAAGCAGAATGAACGCAAAGAGCTTCAGGTGTGGCCCAGGCCTACATGAACCAGAGGAA Variant GeneID:615149|BLOC1S1:NM_001076362:64_cdna 147^219 1 EMBV3_30321 GeneID:615149 5 GENE BLOC1S1 MGC137062 biogenesis of lysosomal organelles complex-1, subunit 1 EMBV3_25035 GAGCCACAGACCGATGACGACCACGACCTTCGGGTAATCCTGACTTTGGAATCTTCATCT Gene BVV0102_313209 + 0 NULL GK000011.2:98138114-98161638 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028987 TCONS_00028984 TCONS_00028986 1 XLOC_015633 NonCoding TCONS_00028986 XLOC_015633 NonCoding NonCoding LOC100847606 11:98158639-98161232 = TSS20250 589 3 0.77391975308642 8.11835314965201e-05 0 0.000136541726574348 5.1772581612945e-05 0.000611907677607793 0.000154563760901823 0 6.51016232834174e-10 6.51550059131606e-10 0.00112229488361204 3.49784096644669e-05 1.98253192228093e-05 0.000131528814102386 0.00358275795104783 0.000822249966279528 0.00766002701628522 0.00453814118391606 0.000677673205126488 0.00018991982145748 0.00252738757231649 3.54702573858599e-05 0.000612539066502838 0.000327085673377935 0.00327323491051345 2.35257156900023e-05 0 0 0.000733681561080271 0.000601673659190621 0.0007961886615906 XR_139426.2 LOC100847606 PREDICTED: Bos taurus uncharacterized LOC100847606 (LOC100847606), 0.0 1059 100.00 0.99490662139219 0 noncoding 0 0 0 0 -0.277211897507742 0.208699116377352 0.0156473545930679 0.736133733241609 CTCTTTGCGCAGCGCCGCTGACCTCCCTGGTTAGGGTCTGCAGTAACTGCTCAGCGTTAACCTCTGCTCTGAGGCGTGGGCAGCTCTGCCCACAGAGAGCCGCAGGGTGGAAGGTCTCCAAACACCGGTTATGGGCTGGTCTGTTCTCGGATCAGCTGTGTTTTGGGAGGCGTGGTCCTGGGCGCCGCAGCCCAACTCTTGTGCTTGTTAAGACTTGGAGTGAGGGCGGGAGAGCCAAGGTTGCTGACTGCTACGGAGCCACAGACCGATGACGACCACGACCTTCGGGTAATCCTGACTTTGGAATCTTCATCTTAATACTACACCTCCCAATTTTGAGTCCCCTGCGGATGTTAATAGCGTCTCTCTACGTGTGTGCACCCTGGTCATTGGTGGAGGATGGAGCAACAGAAGGTGGATACATGATAAGAGGAAGGCTACTCATTTGATTCATGTGAGAGAGCAAAGCAGACCAGAACAAGAGGAGGGAATTTGAGAATGATAATTTTGAGGATGAAGTGTAACTGTTTCTAGGTTGTATGATTTCACAGTAACAATAAAACAAAACAAAATCTTGAGACTCTTAACA EMBV3_18338 GTTCTGGCTAAGATTGTGAATTACATGAAGGCTTTAGGGGACCAGATACTATTTGTAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12335 CACAATCAAGGTGTGGTTCCAGAACAGGCGCATGAAGGACAAGCGGCAGCGGTTAGCCAT Gene GeneID:540239|EVX1:XM_002686851:36_cdna Constitutive 0 NULL GeneID:540239 4 GENE EVX1 NULL even-skipped homeobox 1 EMBV3_40982 GGAAGATTAAATGCCACGACAGTCCTTAAAGAACGCCGCAGCTCACTGCACGTTTCCTCT Gene GeneID:781785|LOC781785:XM_002683717:1_cdna Constitutive 0 NULL GeneID:781785 10 GENE LOC781785 NULL similar to TCRA protein EMBV3_25358 GGAAGTGTTCTTTAAAATGACCGGGGAGTCTGAATGCCTTAACCCATCGACACAGAGCCG Gene GeneID:535342|SLK:XM_002698467:498_cdna Constitutive 0 NULL GeneID:535342 26 GENE SLK NULL STE20-like kinase (yeast) EMBV3_28157 ATTTCGGGTTCGGTGCTCGTCCCCATCTGATTCTCAGCCCCCAACTTTTGGCAAGTTCAA Gene BVV0101_019436 + 0 NULL GK000016.2:68079471-68192900 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068119 TCONS_00068117 TCONS_00068120 TCONS_00068118 TCONS_00068121 TCONS_00068116 1 XLOC_041588 Coding TCONS_00068117 XLOC_041588 Coding Coding HMCN1 16:68192597-68472565 j TSS51066 3188 1 TCONS_00068117_7 932 19 0.98868080880961 0.000724392259114298 5.34902448751803e-12 2.42179882765954e-18 0.000665233127473188 0.000242437444781634 1.34807950872222e-06 0.00071877120716742 4.56636124822891e-06 0.000386644601212944 3.22459263354015e-11 7.02845586969705e-05 0.000176771544843004 0.000337997859185382 8.35517224627886e-99 7.5995904995531e-127 2.04281399677049e-84 3.52364895560937e-14 0 0.000580253931227338 0.00118686637604648 5.43561675373542e-26 0 3.31711758273237e-74 0 0.000367108242192389 7.8596221302443e-18 0.000881153164609807 2.90683545489175e-05 1.03515889092494e-10 5.98069946656646e-05 NM_001192537.1 HMCN1 Bos taurus hemicentin 1 (HMCN1), mRNA. 0.0 5027 99.96 0.874843161856964 NM_031935.2 HMCN1 Homo sapiens hemicentin 1 (HMCN1), mRNA. 0.0 3930 88.95 0.945420326223337 TCONS_00068117_7 sp|Q96RW7|HMCN1_HUMAN HMCN1_HUMAN Hemicentin-1; 0.0 1724 90.75 0.996781115879828 7 coding 1 1 0 0 -0.901778915250495 0.076443368236493 0.00687844848705887 0.956258619608231 CCCCGGGGCATGGGCCGGGCGCGCCGCCCGCACTCAGCCACACGCCGCCCGGGCCGCGGGCACTCGGCCGTCCCGAAGGAGGCTGCGTCCGGACGAAGGCTGCCGCATCTTTGCCTCCCCAGCCCCGTGCAGGGATTTCGGGTTCGGTGCTCGTCCCCATCTGATTCTCAGCCCCCAACTTTTGGCAAGTTCAAAGAGGTTTCTGTAGTCGAATAAATTGCCCCGAGAGGAAACCCGCTGCCTATTGAGGAGGGCTCAGCAGAGTGCTTGGGCGCTCCAGGAAAAAAAGAAAAAAAAGACAAAATGATTTCCTGGGACATGATCCACACCATATTCTTGCTCGCTCTTCTTTATCCTTCCCGAGCGCAGGATGCAATCCCCCAGTCCGAGGTCGAGGCAGAAGAAATTCCCGAGGGGGCCTCAACCTTGGCTTTTGTGTTTGATGTGACTGGTTCCATGTATGATGATCTAGTTCAGGTGATCGAGGGGGCTTCCAAAATTTTGGAGACGTCTTTGAAAAGACCTAAGAGACCTCTATTCAACTTTGCTTTGGTGCCTTTCCACGACCCAGAGATTGGCCCAGTAACAGTTACCACAGATCCCAAGAAATTTCAATATGAGCTCAGAGAACTCTATGTTCAGGGTGGTGGCGATTGTCCAGAAATGAGTATCGGAGCTATAAAAATTGCCTTGGAAATTTCCCTTCCTGGGTCTTTCATCTACGTTTTCACTGATGCGCGATCCAAGGATTATCGACTCACTCATGAGGTGCTGCAGCTTATCCAGCAGAAACAGTCACAGGTGGTATTTGTGCTTACTGGAGATTGTGATGACAGAAGCCATATTGGATACAGAGTCTATGAAGAAATTGCCTCTACAAGTTCTGGTCAAGTGTTCCATCTGGACAAAAAACAAGTTAATGAGGTTTTAAAATGGGTGGAAGAAGCAGTACAGGCTTCCAAAGTTCACCTCTTATCAACAGACCATTTGGAACAGGCTGAAAATACTTGGAAAATTCCCTTTGATCCCAGTCTAAAAGAGGTTACTGTGTCTCTGAGTGGCCCTTCTCCAATGATTGAAATTCACAATCCTTTAGGAAAGCTGATAAAAAAGGGATTTGGCCTGAATGAGCTATTAAATATTCATAACTCTGCCAAGGTGGTGAATGTTAAAGAGCCAGAGGCTGGAATATGGACAGTGAAGACATCTAGCACTGGAAGGCACTCTGTTCGCATCACTGGCCTCAGTACTATTGATTTTCGAGCTGGTTTTTCCCGAAAGCCCACCCTGGACTTCAAAAAAACAGTCAGCAGACCGGTGCAAGGAATACCTACCTATGTGCTGCTGAATACTTCTGGAATTTCCATCCCAGCTAAAGTAGATCGTCTTGAACTTCTGAGTATCTCAGGCAGTTCTCTTAAGACTATTCCTGTTAAATATTATCCTGATAGAAAACCCTATGGCATATGGAATATTTCGGATTTTATACCACCAAATGAAGCTTTCTTTCTCAAAGTAACAGGCTATGATAAGGATGGTTTTCTCTTCCAGAGAGTGTCAAGTGTTTCTTTCTCTAGTATTGTGCCAGATGCTCCGAAAGTTACAATGCCTGAGAAAACCCCGGGCTACTACCTGCAGCCGGGCCAGATTCCCTGCGCTGTTGACAGTCTTCTGCCTTTTACCTTGAGTTTTGTCAGAAATGGAGCTACACTTGGAGTCGACCAGTATTTAAAAGAATCTGCCAGCGTGACCTGGGATATTGAAGAGGTCACTCTGGCTGACGAAGGCGCCTATGAGTGCGTTGCTGTCAGTACTGCAGGGATTGGACGAGCACAGACGTTCTTCGACGTGTCAGAGCCCCCGCCAGTCATCCAAGTGCCTAGTAATGTTACCGTCACTCCTGGAGAAACAGCAGTTCTGACATGCCTTGTCGTCAGTGCAGTGGGTTACAATCTAACCTGGCAGAGGAATGACCGAGATATCAGGCTGACAGATACAGCAGGAATGAGGATCTTGGCTAACCTTTCCCTGGAGCTCAGGAGTGTGAAATTCAGCGATGCAGGAGAGTATCGCTGTGTTGTTTCCAACGAAGGAGGATCATCGACTGAGGCTGTTTTCCTCACCGTGCAAGAACCGCCCAAAGTCACTGTGATGCCTAAGAATCAGTCCTTCACAGCTGGATCTGAGGTCTCCATCATGTGTTCTGCAACAGGTTATCCCAAACCAAAGATCGCCTGGACCATGAATGATGTGTTTATCATGGGTTCACACAGGTATAGGATGACCTCAGAAGGTAACTTATTTATCAAAAATGCAGTTCCCAAAGATGCAGGGATCTATGGTTGCCTGGCAAGTAATTCAGCTGGAATGGATAAACAGACTTCTACCCTCAGATACATTGAAGCCCCGAAGTTGATTGTAGTTCAGAGTGAGCTCTTGGTTGCCCTGGGAGATACAACAGTTATGGAATGTAAAACCTCTGGTGTTCCTCCACCTCAAGTTAAATGGTTCAAAGGGGATCTTGAGCTGAAGCCCTCAACATTCCTCATTACTGACCCTCTCTTGGGACTTTTGAAGATTCAAGAAACTCAAGATTTGGATGCTGGTGATTATACGTGTGTTGCTGTCAATGATGCTGGAAGAGCAACTGGCAGGATAACTCTGGATGTTGGCTCACCTCCAGTTTTTATACAAGAACCTACTGATGTATCTGTGGAGATTGGCTCAAATGTGACATTACCTTGCTATGTCCAGGGTTATCCAGAACCAAAGATTAAATGGCGAAGAGTAGACAACATGCCCATCTTCTCAAGACCTTTTTCAGTGAGTTCCATCAGCCAACTAAGAACAGGAGATCTCTTTATTTCAAACTTATGGGCAAGTGATAAAGGAACATACATTTGTGAAGCAGAAAACCAGTTTGGAAAGATCCAGTCCCAGACAACAGTAACAGTGACAGGACTTGTCGCTCCACTCATTGGAATCAGCCCCCCAGTGACCAGTGTAATTGAAGGACAGCAGCTTACTTTGCCTTGTGCTCTACTGGCTGGAAATCCTATTCCAGAACGTCGGTGGATTAAGAATTCAGCCATGAATATTTAGACTTACTCTCCTGTTGACGTGCCAATTAAAAGTGAATTGAGTCCATGAAATAAGATGTAAAAATGATCACATTTGCATAAAAACCC EMBV3_38417 CTGGGACAAGACCATTCACATCTGGAAGCCCTCAACCCGAAGCCTGCTCATCCAGCTCAA Gene GeneID:787677|WDR38:NM_001163946:50_cdna Constitutive 0 NULL GeneID:787677 11 GENE WDR38 NULL WD repeat domain 38 EMBV3_15363 TTTGACCAGTCGCATTAAAAAGTTGCCTCTTGTGGGTTTCATTGCCTTGCTGTTTGAGTG Gene GeneID:536267|LOC536267:XR_084568:570_cdna Constitutive 0 NULL GeneID:536267 11 PSEUDO LOC536267 NULL similar to kinase D-interacting substrate of 220 kDa EMBV3_06833 CCTTCAGAACGGACAGATCTGTCCTTACCTACACCCAGATGCTCCACAGAGACACTGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19256 AAGGGTTCAAATCTACCCAGGTTTCCTCCTTGGTTCTGCAACAGGATGGGAGGGGTGGTT Gene GeneID:508202|KRT79:NM_001075348:166_cdna Constitutive 0 NULL GeneID:508202 5 GENE KRT79 MGC139906 keratin 79 EMBV3_11982 AAGACCAGCCCTCCACAGGTTCGGAGTGTGGGGACCCGTCCTTCGGTGTTCAAAGGTGGC Gene GeneID:100335902|LOC100335902:XM_002687534:513_cdna Constitutive 0 NULL GeneID:100335902 5 GENE LOC100335902 NULL hypothetical protein LOC100335902 EMBV3_31296 CTTTGTCCTGATCCCCGACCTCAAGTGGAACCAACAGCAGCTCGATGACCTGTACCTGAT Gene GeneID:282640|DCPS:NM_174695:5_cdna UTR3_Alt 2 NULL GeneID:282640 29 GENE DCPS HINT-5 decapping enzyme, scavenger EMBV3_17055 ACAGTCACTCTCATAGGTTGTCCGGGCAAAGCAAGAACTTCAGTGTGTTTACTATTGCTC Gene BVV0102_014007 + 0 NULL GK000012.2:19184696-19194201 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036399 TCONS_00036398 TCONS_00036392 TCONS_00036402 TCONS_00036397 TCONS_00036401 TCONS_00036394 TCONS_00036393 TCONS_00036400 TCONS_00036396 TCONS_00036395 TCONS_00036391 1 XLOC_021143 Coding TCONS_00036392 XLOC_021143 NonCoding Coding RCBTB1 12:19192665-19196014 j TSS26503 2277 1 TCONS_00036392_1 60 0.0496267018006148 3 0.32078853046595 0.000272893011581557 4.71472338680777e-05 0.000580094325833966 0.00146345983211894 0.000604030205416111 9.9649549977646e-31 0.000460688582140143 9.41929359547184e-05 0.000350400842650381 7.67395759975282e-62 5.65852363356066e-06 3.48252352010382e-05 8.90394624799248e-09 0.000421349280551796 9.09439975233689e-05 1.68825399260107e-46 1.89009956338825e-08 1.59706348171524e-10 0.00160991477125302 2.78936986851042e-09 0.000686669209881963 0.000570903198895325 0.000118564191856955 7.72978594514052e-05 0.0015079903517801 0.000817310525794316 0.00116104239985797 9.18756762013485e-13 5.39343292414043e-34 0.000308507221502974 XM_005213685.1 RCBTB1 PREDICTED: Bos taurus regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 (RCBTB1), transcript 0.0 3606 100.00 0.877470355731225 NM_018191.3 RCBTB1 Homo sapiens regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 (RCBTB1), mRNA. 0.0 1023 72.74 0.797979797979798 0 noncoding 0 0 0 0 -0.00668879879909235 0.963577490829176 -0.0677742063246639 0.221022554526867 CAGAGAGACTCATAGAATGAGGAAGCATTTGTTTGCAGGGGTCTGAAAGGGGCATTTCTGTGTGGAAAGCAGCCCTTCCCCACCCTGCCTGATATTCTCATTTGGTGGGAGCTGGGATGCAGGAAGCCAAGACCCTACAGTTTAACTGTTGTTGGGATCCTGGTCTGGTAGAACCCTGAATATTGACCTTCAGTATTGCTGGCCAGGTTACAGAAAGCGAGCTGTCGGACTTCACCTTTGTGCACGTTCCAGGTTACCTAGTTGATGTAATAAAAGATTTAGAAGAATTCTGCTTTAAGTTTTGCATCAATCATTTGACAGAAGTCACACAGACTGCAGCATTTTGGCAAATGGATGGCCCTCTCCTAAAGGAATTCATTGCTAAAGCCAGTAAATGTGGAGCCTTTAAGAACTGAAGCCCAAGACTGCTGGGTTTTGTAGGAACTTCTAAAGTTGGAAGCGGACGTTTGTGGCAACTCTCCTGGCTCATGTATCGGCAGCCCTTTTGCTCCCAGGAGTTGGGATAGTGCACGAATTGTGAGAGGCGTAGAGGCCCCCCCGCCCTCCCCCGCCAGAATGAAAGGTGCTGACTTGGGACTTGGCTGAGAGCTGCATTAGTTGCCAGGTCTGTAGCCTCACTTTGAAGGGATAGTTAAGATCGTTTGAGGTTTTGTTTGTGTTTTTGCATCATTGATGACTTTTTTTAACTTCAAAATGATATTCAATTTAATATAAACCTATTGAAATGGTAATTACACAAAGACGAATTTCTCAGTTAGTCAGGGTTTCTCTTAAGGCTTAAGTACATGCAAGAGTAGTAATGTAGAACTATCTATGAAAAATTAATAATGGAAGAAACTTCACTTGGGTGAAGGTGAATATTTTATAAATCAGAGTCTCCACTTCTAACAGTGTTTTATTAAGGTTAAATTTGAGAACCCAAATTTAAATGCCCCCACCTTTTCCCCTATAAATGCTAATCATGTAAGAGGATAATAGTGATATATTCCTCATTCTCTTGCTTCCTAAATCATGGTTGCTGAATCATCAGATTTGCTATGTCTGACTCAAATAAGTAGTTCTTAAACCCAAGTTTCTTACAGGACTTAACAGAGTTTGTTTTGATTGGTTTTTATCTGTGCCAAATACCACCATACATTTTGCTTATTTGAAATTTCACCAGCTTTCACATTTGACTTTCCTTTTGGTCGTGTTAGGTATAATATTTAGCACAACTTGACTTTGAAGAAGGATCTGAATTAGGGGCGGGTGGTCTGGTTATGAAACGTGGCTCTGGGAGTAAGAGTGTTCAGTGTGTGTCTTTGCAGCTTGCTTCACGTGTCTGTGGAGCTTGCTTGGAGAGCAAGGCTTTGTTTTTCTCTCTGGCCAACAGACTCATTTCTCTCTGTGGAAGCTCCCCTGGTGAACTGTTTGCTGTTTGGAAGGTCTCCCATCTGAATTGAGACTAGATACATTTTCAGACTCAAATGAACAAGAGGGTGAAGAGATGCTGCAGCTACTGTTTTTAGCAAAGTTTCTGTGTGTGTTGGCGGGGGAGGGCCCAAAGATGGGAATTCATTGATGGGGGCAATAAACACAAGCCCAGAAATCCCAGCCCCCTTTCCTTGACCGTGTTGCAAGTGATCAAAGCCCAGTGAGTTACTACATTAGGATTATTACTGCAGCATGATAGAATTTTCTTACTAGGTTGAGAAATGTACATTAATTTGATTATTAGCCATGATGGGTAGTATTTATAACAGTCACTCTCATAGGTTATCCGGGCAAAGCAAGAACTTCAGTGTGTTTACTATTGCTCTTACTTGAAAAAAAACACTTTAACAAAAGCACAAATTAACGTAGTATATCCATTTCCATAGATAGTTCATTCATTCAACAAATATTTGCCGAGTTCCTAATAGGTGAAGAACCACTTCTCAGATTACTGAGTTATTTGTATGAGTATGTATTCAGTGAAGAGAACAGGAAAAAGTCCTTCAGAAAGTACTTGTGTGTATGTGTTTTTTTTTTAATTATGCTCTCTTATTTTTCTACCTGGTTTTGTTAATCACGTCAGGAGATAAAAACTATTCTTTGAGTTGTTTTCTTCATCAGACATAATTATGAAAGCCGAAATATTTGTATTTCTTAAAATAGCCCTAAAATATACTCTTGAACTTCTTACTGGAACATTTGATACTCTAGTTATACAGGTTGTATTTATGCAGTGTTTAGAGTGACATGTTAATAAATAAAGCAGTCTGTTAAAATGGGCAT EMBV3_11533 ACACAGAAGGAGCCTCTGGTCTCATTCCTGCCAGAATCCTCCTTTTCCTCTTGTCTAATC Gene GeneID:538846|JAM2:NM_001083736:22_cdna Constitutive 0 NULL GeneID:538846 1 GENE JAM2 MGC151720 junctional adhesion molecule 2 EMBV3_37494 ACCTTTCGCCAGGAGCTCCAAAATATCGAGATTCTTGAGCAACAGCTTCAGCAAATGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27863 TCATCCAAGTGTCTGTCTATACTGGTTCAGTTGTATGGAGGGGAAAACCCAGAGAGCCTG Gene GeneID:100336480|LOC100336480:XM_002696869:269_cdna Constitutive 0 NULL GeneID:100336480 22 GENE LOC100336480 NULL CG8866-like EMBV3_23850 GGCGAAGCTGGCGGAGCAGGAGGATGGGCGAGCAGTCTGAATGCCAGAATGGATAACCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32496 CCCTTCTTCCCAAGAGGTAAGATGAGAGCACCTTGATTTTGGAGGTCGTTGGAAGCTACC Gene GeneID:506984|LOC506984:XM_002687074:232_cdna Constitutive 0 NULL GeneID:506984 4 GENE LOC506984 NULL similar to LCHN protein EMBV3_35349 AAACTAATTGTGGGAATTGTTGTTGGTCTCCTCCTCGCTGCCCTAGTTGCTGGTGTCGTC Gene GeneID:281614|ALCAM:NM_174238:26_cdna Constitutive 0 NULL GeneID:281614 1 GENE ALCAM NULL activated leukocyte cell adhesion molecule EMBV3_34041 TGCACCCAGTGCCGCCACCAGTTCTGCAGTGGCTGCTACAGTGCCTTTTACGCCAAGAAT Gene GeneID:509856|RNF31:NM_001101918:110_cdna Constitutive 2 NULL GeneID:509856 10 GENE RNF31 MGC142809 ring finger protein 31 EMBV3_25751 GTCTATGCGGTGGTTACCCCGACCCTGAACCCTTTCATCTACAGCCTGCGCAACAAAGAA Gene GeneID:517569|LOC517569:XM_002695737:416_cdna Constitutive 0 NULL GeneID:517569 19 GENE LOC517569 NULL similar to olfactory receptor MOR157-1 EMBV3_19773 GGAGGCCCCATCCCTCCGGGTTTCTTTCAGCCTTTTATGTCACCACGATACGCAGGCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07802 TGGGGCAGCATGAGGCCCCTTATGAAATTGCTGGGCCTTCATCTTGGGTCTCTCCAGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13229 TGAAGAGAGCCACAGAGACGCCAATCCTCAAGCAGCTGAACCACTGATCCAACACTAGCA Gene GeneID:505006|RWDD2B:XM_002684614:90_cdna UTR3_Alt 3 NULL GeneID:505006 1 GENE RWDD2B NULL RWD domain containing 2B EMBV3_30268 GTGGACGTTCACCCGGAGGGGCAGACCGCGGCGGGCAGGAAGACCTATGCCATGGTGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09842 CAAGCTGCTCTTCCTGCCCCGCCGAAGCCGAGCTGCCCCCATCCGAGTTCCTGCAAGTGG Variant GeneID:506974|GATSL3:NM_001081514:44_cdna 241^311 2 EMBV3_33967 GeneID:506974 17 GENE GATSL3 NULL GATS protein-like 3 EMBV3_14507 GCAAAGGCAGTTCAACCTCTCAAGAAACCTTGTGCTAGGCACAACACTCTTTTCTGGGGG Gene BVV0102_321337 + 0 NULL GK000008.2:61230550-61399752 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43781 ACTTTAGAGAATTGGCCATAAGTGAATGGGCACACACCTGTACGTGAAGGGGCCGTACTC Gene BVV0102_420798 + 0 NULL GK000018.2:55334838-55336243 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21492 TGATGGGAGGGACTGGTGGAGGGAAAAACTGGGTCTTGCTCTTATCTGCTGATGGGTGGG Gene BVV0102_367758 + 0 NULL GK000019.2:38330613-38354790 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20591 GGCCTCCACTTAGAGATTTTCTAAGAGACCCGTGGAGAGGCACAGAGCGAGACAGACACA Gene GeneID:617489|LOC617489:NM_001076465:409_cdna Constitutive 1 NULL GeneID:617489 18 GENE LOC617489 NULL hypothetical protein LOC617489 EMBV3_30156 AGAGCACTGTGAGGAATTCTGGCACACAATCAGGTACCCCAACTGGAAGCACATTTCCTG Gene GeneID:539733|RWDD2A:XM_002690049:16_cdna Constitutive 0 NULL GeneID:539733 9 GENE RWDD2A NULL RWD domain containing 2A EMBV3_32891 CAGACAATATCCTTCCTACATCCTTTCCCTGTACCCCTAACCCCAAGCCCTGGCAATTAC Gene GeneID:515467|ALS2CR4:NM_001046200:110_cdna UTR3_Alt 2 NULL GeneID:515467 2 GENE ALS2CR4 MGC137548 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 EMBV3_23660 GCAGACATTTTTCCGCTTTACTGGCAAAAGTTGGGGATGAAGAGAACAGTTATCTCAGTG Gene BVV0102_142086 - 1 EMBV3_06058 GK000001.2:41825525-41826467 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000396 TCONS_00000395 1 XLOC_000106 Coding TCONS_00000395 XLOC_000106 Coding Coding CRYBG3 1:41699876-41826559 j TSS197 10535 1 TCONS_00000395_13 2903 22 0.917012677412734 0.00305505765234594 0.00138083696285904 0.00164630809664394 0.00121970422593722 0.00131250686335635 0.000315434865482459 0.00110763013586437 0.000577697096978154 0.000427064195690275 0.000154533653009999 3.42789193407689e-05 8.1206523936129e-05 2.68639785412229e-08 0.000143712322391581 8.2951117342161e-08 4.52943974181428e-07 3.19848032436988e-51 4.82952302195508e-16 0.00143069738182378 0.00127458156547321 0.000333857025696623 9.9868181557187e-06 0.00028581527043715 0.000156090085854111 0.00277166860016776 0.00194099553481115 0.00192152352041984 0.000455628711296109 8.56392914365016e-05 0.000250767869885751 XM_002684681.2 LOC516526 PREDICTED: Bos taurus uncharacterized LOC516526 (LOC516526), mRNA. 0.0 1.847e+04 100.00 0.971903179876602 NM_153605.3 CRYBG3 Homo sapiens beta-gamma crystallin domain containing 3 (CRYBG3), 0.0 4392 81.94 0.421737066919791 TCONS_00000395_13 sp|Q68DQ2|CRBG3_HUMAN CRBG3_HUMAN Beta/gamma crystallin domain-containing protein 3; 0.0 1832 86.76 0.353427488804685 0 coding 0 0 0 0 -0.0878363861856996 0.614948187890828 0.000196716804457112 0.997564893284026 AGCCGCCTCAGAGCACGAGAAGGAGTAGTGCTGGCAGCCCGTCGCGCCCGCGCTTCTACCGCCCGGGATGGACTGAGCCGCGCCGGCCGCCCGCGCCGAGTAGCTCCTGCCCTCGCCGGGTCCCACGGCCCCGGACCGGGCTCCGGACACCGCCTCACGCGTTCCCAGCGGACGGCCTCGGACCGGCTGCCGCGCCGGGGAGATGTCCGGCGGCCGGAGAAGGGGCGGCGCCCCCTGGCATAGCTTTTCCCGATTCTTTGCTCCCCGAAGCCCTTCCCGGGACAAGGAAGAGGAAGAGGAGGAGAGGCCAGGGACAAGCCAGCCGCCCGCGCCGGGCCGGGACGCTGCCAGTGTTGAAAATGAGCCCATGAGCACAAGTCAGAAAAAGGAAAATATACTTTCATCAGAAGCAGTGAAGATTTCCCAAAGTGAGGACAGAAGGACCCAGGCCCAGCAGCTGATCACTCTTCCAACACAGGAAGATTCCAAAAAGCCCAACGACCTTTCCAGTTCCACTTCAGAGGCCAAAATCGGAGAAAGTGATAAACAGACAAAAGAAAGCTTCTTCCAGTTTCTAGGTAACTTATTCAATATCTCAGGAAAATCATCTCTCAGTGAAGCCAAGCAGTCTTCTTTCAAAGATGAACATGACAAACCTGAGAAAGACTTACGAAATCCCAGTCGTCATGAGGAAGGGGGCCAAAGGGAAAGTGCTGGTGGCTCCCTGAGAACCCAGGCGCTTCCAGCAGAGGAACAGTCCAGCTCAGCCGAGCTCTCAGATGCCTTTTCTTTGGATACAACACAAGACAGTGAACAGGAAACCAGTGACTTGCTGAAACAAATGGATGGTAAATCAGAGAGGCCTTTAGTAACATATGCAACCTACCGAGGCCCCAGACAAATTAAGAAGTATTTGAAGCAGCAGACAGTGTCCGAAACCGTGAATCCCTTAGACAGAGAAAATGCAAGTTCTGACTCTAGTACAAGCACACATCGTGGCCCTGGGAGTGAGATGGAGGCTGGAATGGTGTTATTACTGTCATCAGCTAGCACAGGCATACCTGTGAAAGGACAAGGGCCTGAAGGCCAGTTAGAAGACTCTGATGATAACGAAAGAGATCTCAACACAGGAAGCCATTCAACAAACAACCAAGGACTAGCCAACACGGCTTCTTCTAGGGGTGTTTTAAACAAAGCCTATCCTGGGGGACCCGAGACGAGTAGATCATCCCATTCTGTGACTAGCTCCAGCTCCACTGCTGGAGATTCTGACTCACGGCACCATTTGAGTTGTGCACCAGGTTCTCAGACTGACAGAAATTTGGGATGTTCAGCATTGTGTACAGAAAGTAACAGCAGCAAAATTCCTTACAGTCCGGACTTGGAGAGGACAGCAACACCAGGAACTGTGGTAAAACGAACCAGCTCCGTGATGAGTGATGGAACACCAGTGCAGGCTGAGAACTCTGCTGCTGCTGACTTCTCTTGTAGTAAATCTGATGGGAGTGACCCTACCACACTTAGAAGTGCAGATTTGCTAAGTCCAAATAAATCAATTAGGCGTGAAGCTCTGCAGTTGCCAGAGAGTAAGTGTTCTAACAAGCAAGCGGTAGAGAACTCATCAAAGCAGCCTGCCAATCACACCAGCTCCATGGCTTTCCAGAAACAAGCTGTAACAGACACAGAACTTGTAAATGCTGGAAACAGATCATCTGCCCAAGACACACAGAAAAATTTGGCTCCTGCAGAAATCAAGCCAGAAACAGAAAATACATCAGGTGAGGAACCCACTGCTTCAAGTCATGTCAAAGCTCCAGAAGATAGAATTGAGTCACTACACAAAGATACTGACCTACTTTTACTAACAGAAGTCAAAAACCTTGTTAGGCCACATGGCAAAGTGCCTCCCTTTAGGATGAATCAAAAGGAAGCTGCCTCTGTAAAACACACCAGTGAATCAGTAGTTGTAACATGCTTAGAAAATAAAATAGCCCCTGAACTGAATATTGAACTTAATAGAAATCACATTTCAGAATCCCTTCTTGACTCTGAGAGTCCTCAACAAGCCATAGCATCACCTGATGCCAGGACATCCCCCAGCCTTGGCCATAAGTCAGATTTCAGTGCTTCACACCCTACCTTTGTTTCCAGAGTCGGCATGCTGAGCCAGGTGGATATCCCTATTTTAAAGAATGAAGGTTCTTCTGTGCTTGTTGAAACTGGAGATGTCAACATTGTTGGTATCTCCAGTCAGCCTCCTCAGTGTCAACAAGAACATGTGGCAAATCATGTGGAGGCCACGGACAGGAAGAGTCTCCCTGCAGGCCTTCATTCTAAGTATGCACCTACAGCTCTTGAATCCAAGGAAGTTCTTCCTGACAGGGAGAAATGCCAGTTTCTACTAGATCTTGAAGCCAGTGACACCGACATAACTGCAGTGGACTTGAGCTTTGAGCCTGCAAGCTTATCTCAAGACCCTGAGAAAGCAGAGTCAGTGCTATCAAGCACCGCAGCAAGTGAGAGCACTGCAGACAAGCTTGATTCTTCTTTCTCCTTGGAAACCAAAACTGATAGCATTGCAGAAATGTTACCAGAAGCTGACATTGGTGGTCAGAACAATGTTCCTGTTGAGTCACATTCTGAAACAGGAAAAACTCTAAGTCTCTCCAAGATACCTGTTACCCGAACAGAGCCCAGAGACATTTCTCAGGATGAAATTTCTTCCCCACTTGACATCACAGGTGTGCCAGCAAATCCTGCTTTATCAGAATTGACTTCCCTAGAAGTTGAACAGGACAAAATTTTTCAGTTAGTGGATCATGAGGAAATTAAAGAGAAATACTTAGATGCCAGCCTTAAAGAGAGTTGCCAAACTGAGGTTTCCCCTTCTGCCTCCAAATATCAAGGTGTACAGGGAACAGAGGTGGGAGCCTGCCGTGCTCTACCTGCTTGTCTCCAGAGTAATAGACCTGAGACTTCACCTCCTGTTCATGATGAGAAAGTTACTAGGCAAGTGGCACAGAATTGTGCAGCCAGGGCTTCTATCATCCATCCACCTTCAGTTCCTTGTGGGAGCAAAAAGATTTTTGATTTTTCACAACTCAGCTTAGCTAATACTTCCCCCAAATTCCAAGAAACTGACAGCACAAAAGCCAAGTCACCTTTTCTGGGTTCTGGTATCAGTTTGAGAAAAGAGGCTTTTGCATCTGAGGATTCAAGTTTCCTTCCTAATCCTTCTGTGCTAAGAACAGAAAAGAGAGCCTCATCTCCCAGAAATAAAGAGGATGCCCATCCCCTAAGAGGTGGTACTCACAGCCTGCCTTCCTCCTCCAGTAACTCTGAAGTTAGCATGGTTAGAAGTTCATATAACCCCACAAATAATTTTAGTTCTGTAAAAGTTCCCATAGATGTCACACATGAAGGTGCCTCCTTAACTAACCTGTTGGACCCTAAAAGCTCTTATCTGGAATCAGAAACATCTGACCTCACAGGGGCAGAAGTCACCCCACTTCAGGACCATTTGGGAGATCCTACTGGGATGGTATCTCTTGATTTCCCAACCGCTGCCCAATTTGACAATCCCTTAGAAGCAGCGACTGGAGCAGTTGCTGGGACCCCAGCGTCAGTTAACAGCTCAAGCCAGCAGTGTTCTGAGGCCTCTGCTGAGCACACAGAAGCAAGGAAGAGAGCACATGCCCAACTTTTGGACCTCGAGAGTGATTTCTGTAAAAAGGCTGTTGCATTGATTGGGGAGGCCTTTAATTCTGTCAGGGAAGAGCTAAAATCCAAACACTCAGTCGGTACCTGCCAGGAACATAGAGCCATAGACAGCATAATGAATCCAGGTACCCTGGAAGAAGACATCCCTGAGAAAAACCCATCAGAAGTGACACTGACAGAGATCCAGTCCACAGAGCATTTGGAAGAGCAGGCTGTGGAAAACATACCTGAAGTCCAAGGGAAAGAAAAGGCCTGTGTTTCACCTGTGGTTGGTGAGAACAGTCTCCTTTTTAAATCTGATAAAATGAATGTATGTTGGTTGTTAGAGGACCGAGCTAGGGAATTAGTCAATCAGATTATTTATTCAGCCCAAGAAACTGTAGCAAATGATGCTCAGGGTACCTCGGATTCTGAACTTCAGGCTAATACTTCAGAAATTCTGAGGAGTGATAGTGTTCAGCCATGTGATATGGTAAGAGAGTTCTTGGTGTCAGAACAGGCCATAAATCAAAGCACATGTGAAATCAGTGGGAAAGTATTAGGTAGATTCTTTGCTGAAAGTAACTTAGGTAGTGACACAGAGTCAATAAGAGGAAGAGAAATTGTTCTCTATCAAAAATCCCCCTTTTCAGGAACTAGAGATGGGCAGTCTGATAGTATAAATTTGCAGGAATCAGATACTGTTTTACTAGCTGAAAACATACCCCTTACAGGGTTAGATGATAAGGCAAAAACACACTCGTTCCTCAAGGAGGACTCTAAAGAGAAAATGGGGACAGAGTGTGTTGATAATCACAAACCTGAGACAGAGGATACAAGAACTCTTGTATTAAATTTCAAATGGCCTCCATTTGTGAATGATGACACTCATGTACCTGGGACATCTAAAAGCAGCTTGTCTGATACTTATGTATGTTTATCTGAAAAAAGCTTGCCAGGACACAGTAACAAAAGCACACCCCTTGCAATGTCAGAAGTAGGGAAAATACACAAGGACACTGAAGTAAATATCGGAAAGATTGAGCTTATACCTTCCATGGTAGAAATGGGAAAACCAAATAAGAAGGACGCTGAGTTGAATATTATGAAATATGAGGCAGTCCCCCCAATGTCAGAAGTGGGAAGAGCACATAAAGAGGATGCCGAATTGAGTACCTCAGAAACTGAACCAACAGCTGAAATTCTTAAAATGCGAGAAGCATACCAAATGGATGCTGAAAGGTATATTGAAAAAACTGAGGGATTGCCTGCCACTTTAGAAATGGAAAATATTTGCCAAAAGGATGCTGAAGGGGATATTGCAAAGACTGAGGTGACACCTGTTACATTAGAAATGGAAAATATTTACCAAAAGCATGCTGAGGGGGATGTTGGTAAGACGGGAATGACATCGGTTGTGTCAGAAATGGACAGTATCTACCAAAAAGATATTGAGGGGACTGCTGAAAAGCCTGAGTCAATACCTGCCACACTAGAAATGGAAAGTATTTACCAAAAAGATGCTGAAGGAAAGGTGGACAAAACTGGGGTGATGTCCCTTACATTAGAAGTGGTAAATGTCTACCGAAAAGATGGTGAGGGGATCACTGCAAAGACTGAAGGACCTTTATTAGACTTGGAAAACACTTACCAAAATGGTGCTGAAGGGGTTATTAGGAAAACTGAAATGATGCCTCCTTTTGTGTTAGAAATGAAAGAAGCACCCCAGAAGGCAGTACCTGCTTCCTTCGAAATATGTAAGGGAGATATGAAGGAGACAAGTAGGGGAACTTTGTCCACACCCTCTAAGAGAGAAATGGAAAGCACGTTCCCAGAAGATTCTGATGGGACCATCAGGAAACACATAGTGTTTCCCACAGCAGTCAGCTCTGAGAAAATACCTGGAACAGGTCTGGAGTTGCCCATTACACAGGCAGAGGCCACATCTCCCATACCTGAGGCTGAAGAAGCATACCAAGAGGGTGCTGACAGAAGTGGTGGAGAAGTGGAGAAAGAGCCTACGGAAACGAAGACAGGCTGGATAGCGGGTGACACTAGACTTGCCTCGTACTTCAGGGATTATGAATCGCCTACCTTAAGTAAGGATAATGAAGGCCACCCAGCCTTAGCAGTGCCGGACTTTCAACCTGAGGGTACCATGGGAAGGCTGGACAGAAAAACATCTGTTACTACAGTATATAAGAAAGTAAGAGACCTACAGTATGGAGACAAAAAGGAAGAACCTAACTTAGCCTTCGTTTCTCAGGAGGAGCAAGAAAACTCTTCCTTTACTATACTGTATGAAGAGCCCCTCCAAAATGAGGACAAGTACACTACCACCGAGGTAAGACGAACACATTCCCTCCTGATTCCTCACACAGCTCCCAACAGCATGCCTGTCTTCGCCTGTGAAAGGTCTGAAAGTAGAACTGACCTCGTCCATCATTTTGAAAAGGAAGCCAAATTAGGTGATGCATTTGATAGTGACAGTTCAGAAACATTCTTATCGGTAGAGGCCAAAAGGTACAAGATCTATCCCTTGGCTTTGTCTCCCATTTACGAGGATGACAGCTCTCAGGAAGACATTCTGTCCAGCGAGGTCTCACCTGGTCGTCATGGTGCCTCGAAATCAAGAGAGAATGCAAGCCAGCAGTCTTCTGTATTATCGCTTCTCCAGTCAGTATCAGAGCGTTTAAAGATGAATTTTGATGAAGATGACAGACAGGAGGGCGGAGAAGAGGAAGAAGAGGAAGATGAGGAAGAGCCACTGCATAAAGGAAGTCTGAGAGCTCAAAGGCAGGAAACTGTTACCTTCAAGCAGCCGGATTCTTCTCTTACATTTTGCTCTGATGATGACCGGGAAAGTACTGGAGTCTCTAAGAATTCTTATGTGATGTCAAATGAGCCTACGACCTCTAATCTGCAGATTGGTCTATGGCCAGAAAAGGCCTCATTTCTACAAAAATCTGACCTTACTTCCAAACTACATTCTTCTCTAAAGAGTGCTTATCATCAGTATTTGCAGACCTCTAAAACCCATTCCTCAGAAAAAGGAGCCAGATTTGGTGGAATTTTTCAGGAACCAGTGTCAAAGTATTTCCGCACTCAAGACACCCCTGGCCGATTAAGCCCATTCACAGAGAATGTTGACAAACAAACTCTGAAATGTAACCCAAGACCTGGAAAGATGGTTATCTATGATCTCCATAGAAGAAAATATAAACAAGAGATCTACTGTAATATTCCTGATGCTACATCTTGGTCTTATCCGAATGGGGTACTGATAAAAGTTGTAAGGGGCTGCTGGATTTTATATGAGAAACCACATTTCCAAGGTCAGAAATGTGTTCTGGAGGAAGGAGAAAAGGTGTTAAATCGTGACTGGCTTCTTCAGAACAGAAAGCATCCACAAAGAAACTTTGTGTTGGGCTCTATCAAACGTGTCTTAAAGGATTGCAGTATTCCAGAGATAGAGCTTTGCCCACAGTCTGACCCGGCATGTTGCCCTATCTACATCCAGCGAGCGGTCCCCAATTTGGAAGAGCTGAATATCCCCAAATCTGTGTCCTTCACCGTGAAGTCAGGCGTTTGGCTTGCCTACCCAGATATTAATTTCAAGGGGCAAGCTATAGTTTTGGAGGAAGACCATGGACTCGTTGAGATTTCTGCAGCAGAAATTAAATCATTGCATCCACTTCAAATGGGTGGACTGAAAGTGGAAATGCCTATGAACTTAAAGGTTATTATTTATGAAAAACCTCACTTCCATGGACAGGCCAAAGAGTTTAGTGAACACATAGATTCTGTCCCTAATTTTTTAAAAAATGATGTAGATTTTCATGGAATTGGATCAATCCGTGTCATCGGTGGAGTATGGGTTGCCTATGAAAAAGAACATTTTAAAGGCCAGCAGTTCTTGCTCGAAGAAGGAGATTTTGAAGACAGTAATGCCTTTGGGGCATTAAGTGGTTCCATCTTGTCTTTCCGGTACTTACAAGCTAATTTCATAGAATCTTCAATCACACTGTTTGAATCTGATCTGGAAAGTGGGAAGTTTATTGACATTACAAATCAGGAAATTTCTGACTTAGAAGAAATTGGCTTTGGCAGTGAAACAAGGTCCATTCACGTTAAAAGTGGCGTATGGGTTGCCTACCAGCAGAAGTTCTTCTGTGGAGAACAGTACATTTTAGAGAAAGGGAAATACAAGTGCTTTTTTGACTGGGGAGGATCAAATAATACAATCATGTCAATACGACCCATCCAGTTGGAACCACTTGGGATAAATGAGCCTCCACATTTGCTCAAAGCTTTCAGTAAACCAGGGTTCCAAGGTGAATGTATCGATTTCACAAAAGAAGTTTTGGACTTGACTTCATCATTCATGCCATGTTCTTTTAAAGTTCTTCGGGGTTGCTGGCTCCTGTATTACCAAGAGGGTGTTTCCACTAATCAGTGTGTGTTAGAAGAAGGCCTCTATGCCGACCTTACTTCCTGTGGCTGCCCAACATCTAGAGTCAAATCCCTGAAGCCCATTGACTACGTTTTTGAAGAACCCTCCCTTAGCCTTTTTGCTCTGGAACACTGTGAGGGGAGAGAGTTACATCTAGAAGAGGCTGTGAACTCTGTTCTGAACAAGGACCTGCACTTCTACACCCAGTCCGTGTGGGTGAAAAGTGGACTGTGGATAGCTTATGAAGGACCCAATTTCTTAGGAAGACAAATCCTACTCGAGCCTAATGAGATCCCAAATTGGAGAGCATTCAGTGGATGGAAAACCATTGGTTCCCTCCGTCCTGTGAAGCAGCCCTCAGTGTACATCAGAATAAGGAACCGAGCCCAGGATGGGTACCTGACAGTCACGGGAAATGTGGCCGACACCAGGGCAACCTCTGTGTGCATCTCTCCCTACAGCGGGAAGAATACGCAGATCTGGCACTACTGTCGAGGACTCTTTAAATCCAAGGCCAGTGACACATGTCTCGATGTCATCGGTGGTCGAGACACACCTGGAGCTAAAGTCGCCCTCTGGACCGAACATGGGCAGTTCAGGCAGAAGTGGAGACTGAACAGAAATGGAACCATCAGCTCCTACCTCAGTGATCAACTGGTCCTTGATGTTAAAGGAGGAAATTATTATGACAAAACTCACGTAATTGTAAACCAGCCCCTGGAGGGAGAAGAAACACAGAAATGGGACATTGAAATATTGTGAGAGAGTCCGCAGTGTCCCTGGGAGAGCATGGAGGGAGGAGGGCCCTCATGCCCTGTGGAAACGACCTGCCCATCCTAGGCTCTGGGACCACTGAGTGGAATGGGCTTCTCCCCCAAACGTGAAGACTGTTGCTCTTCACCATGGAAGAGCTCAAAATATGCTTGCCAGCTAGTAGGCGTTCCTGTGAAGAATGCATTATGATGTCTGTGGAAGGTTCTACTCCCGCTTGATCTCCAGCTTCGGTGAGCAGGTTTTTTGAAGTCTGTTTTCTCTTTCTACCAAACACAAATCCTATTCCTGATAGTTACAGGACACTGCTGATGCTATCACCCTCTATTAGCTATTAACAACTAAGTGTGTAGCTGAGTGCCAGGCACAGGGAAGCGAAGTCCGACAGGTCAAGTCATACTTTTAAGAAGATGAATACTTTTTTCACAATATCTGAAAACATATTTAATAAAGCTTACTGTTAAGCTACTGTATTAGATATGCATTAAGAGTTCTCTCTTGAAGCTTTTATATGAAGTACCATAAGTGTTCACCTCAGCAAGTACAGGAGTGTTTTCTGTTGCTATTCTTTGCCTGATCCTTTAAACTAAAAATGCACAAATAGCCGGTGGCTGTCCCTTCTCTCTCGGATGACAACGCTAACCAGGGGTCACTCCTATCCTGGTGCTGACCCCCCCTGATCTACCCTCAAGTGTTTATAAGGAAGGACTCTGTCACCTACGTATAATAAATTTTCCTTTGCCTAAAGTAAAGGGAAATTTTAAGTTAAAACCAAGTAGTATTTCAGCCTTGACTATACCATTTTCCTTTACAAACTGTGACAAGAAACTCAGTTTTTCACTTCCATTTTAAATAGCTTTCATTCGAACAAAATCAGGTAGGATATTGTCTTGGACTTAGTCTCAAGTAAGCATTACCACCGTCACTATAGAATTCTCAAGCATTTTTCCCTCCTAAGTTTTAAACTTACACTGAGATAACTGTTCTCTTCATCCCCAACTTTTGCCAGTAAAGCGGAAAAATGTCTGCTCTATTTTTCTATAGAAAGATTAAATTTTCCAGTGATATTTTTAAAAATATCAATCTATATGCACTTTAGAATGTAAAGTAACAGTGAACTGTTTAAACTCAAAGACCCACTATTTTGACTATTTTTTATAGAGACTTGGTCTTTCCATGTAAATATTATTGGGGATTTTTTTTCCTTCAATCTCAGGCTCTTTCGTAATCTTTCAAACAACACCTGTAAAACACCCTTGCCCATAGATGTGAGTGCCTCTTATTAAATGCGGCAGTATTATTTAATGAAATTTGTTTTAGGGTAACTTTATTTTAATGGGGGGTGGGGGGGGGCTTGTGTATACACAAAGGTATGGTATGTATATTTTCACTGTAAAAAACCAAGTTAAAAAATTTTCATGTTAATTGTTGTTTAAAATTTTTCTAGAGCCAGTGAGGCTCTTTAAAGAAGTTATTTCTTCCAAAGAACACCAGGTAATGACAGTTAAATTTACATTTATTGGAGCTGTGCCTTTTCTACCACACTGGATTAAATAAACTGGTCGAAATATGGCTTTTGTCACTTTCTGGGACATTGAGTAACTTGCTGTTC EMBV3_09449 AGAGACAATTGATTCCCTGGAAGATGACTTTGAGGAGAAGGTCCTGTGTGCTGGTGACGC Gene GeneID:781700|LOC781700:NM_001102526:20_cdna UTR3_Alt 2 NULL GeneID:781700 13 GENE LOC781700 MGC154974 hypothetical protein LOC781700 EMBV3_21823 CCGAGAAAAGATCGAAAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGTAACGTGGG Gene GeneID:506676|UBXN1:NM_001037588:52_cdna Constitutive 1 NULL GeneID:506676 29 GENE UBXN1 MGC134136 SAKS1 UBX domain protein 1 EMBV3_30068 AGCCCAAATACCCTCGGAAGAGCGCGCCTAGGAGAAACAAACTTGACCACTATGCCATCA Gene GeneID:100300832|LOC100300832:XM_002688363:178_cdna Constitutive 0 NULL GeneID:100300832 6 GENE LOC100300832 NULL similar to ribosomal protein L23a EMBV3_35694 AAAATCGGAGCATAGTTGTCTTTTGAGGGTAGAATTGAAGCGCTGTGGGTCCTCAGGCCG Gene GeneID:533455|SHC2:XM_002689160:181_cdna Constitutive 0 NULL GeneID:533455 7 GENE SHC2 NULL SHC (Src homology 2 domain containing) transforming protein 2 EMBV3_05480 TCTTCACCCAAGGTTCCTCTGGCCCCCTGCCGAAGGTCTATCCTGAAAATTGTGTTTAAG Gene BVV0102_102190 + 0 NULL GK000021.2:55428387-55487969 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121567 TCONS_00121566 TCONS_00121568 1 XLOC_073432 Coding TCONS_00121568 XLOC_073432 Coding Coding MIS18BP1 21:55396857-55483077 j TSS90523 5514 1 TCONS_00121568_8 734 0.0591222343126587 18 0.936255349748895 0.000481841668254155 0.000124864904113961 0.000332975342810136 5.45858631688744e-05 0.00020106206351281 3.29738711318454e-05 8.3985013943935e-05 6.12456516078122e-05 0.000341905236277271 0.00026329399273305 1.10941264763766e-10 1.24787829349269e-05 1.87051997839379e-08 1.26664290482978e-09 3.93762246197813e-10 0.000590287506923742 0.000932206578154051 0.00042889597430888 2.84842317891016e-11 6.69953002150657e-08 6.41878126306002e-05 0.000265832873835317 0.000212524899293244 0.000303293348848535 0.000127463059593756 3.50972788140478e-11 8.29073103633425e-05 5.54588404025285e-08 3.18063663520652e-06 4.77312129821985e-09 NM_001244171.1 MIS18BP1 Bos taurus MIS18 binding protein 1 (MIS18BP1), mRNA. 0.0 5584 99.74 0.565651070003627 NM_018353.4 MIS18BP1 Homo sapiens MIS18 binding protein 1 (MIS18BP1), mRNA. 0.0 1665 81.83 0.304678998911861 TCONS_00121568_8 sp|Q6P0N0|M18BP_HUMAN M18BP_HUMAN Mis18-binding protein 1; 0.0 727 72.50 0.719346049046321 1 coding 1 1 0 0 -0.0083205122322613 0.961636026516142 0.00526438137553782 0.914875900764142 GGGCGGGCTCTTCAAATTTGAATTCCCTAATAGTTCTCGTGTTAGGGAATCTCGCGGAGAAGGTGAGCATCCTCTGGGGTTCGGCCGCTCAGGGGTGGGGCCGACTTGGGCCAGCGGCGCGATCTTAGGGCGCCCAGGTTCTCCGCTGTCCCGAAGCCGAGCTCAGACTGCTGCCGTCTCGCCCGGCCAGGCTCTTCACCCAAGGTTCCTCTGGCCCCCTGCCGAAGGTCTATCCTGAAAATTGTGTTTAAGTGAATTTTCTGTTAGAGGGAATTTGTTGCTTCTGTTTATCAAGATGATTGCAACATCTTTGAAACACCCAGGAATTCACCTGTCTTCAGAGACATCTTCTCAAAGGAGAAATGTGCCCATGCACGCGATCTTTTTTGACAGCATTCCTTCAGGCACACTTACTCCTGTAAAAGATTTGGTGAAATATCAGATATCCTCTTTAAAACTGAATAATCATAAAAAGAGTCAGTTTGTAGAAATGGCAGTTTTTAATAATAAAAATGTATTGCAGTCTACCTTGCTAGCAGAGGCTACCACCTCTAACAGTTCTCTTGATATCAGTGCTATAAAACCCAACAAGGATGAATTTAAAAATAAAGAAAGCTATGAATCACCAGGAAAAATATTTCAAAGAATGAAAGAAAAAGTACTACGCAACAAGCAAGAACAAGCATCAAGAAACAGTTTTTTGGAACCAACACAAAATGAAAGTTTCGCTCCTAATGGAGCTGAGGAAAGAATATTACAGCATACCTACCTCTGTGAAGAAAAGGAAAACAACAGATCATTCCAGCCAGAAAACCGTTCACTAAGAGAAAACTCAACCTCAGTCCAAGAAGTTCCTCTGGAATCATCAAATAATATTTTTGTGCCAGTCAAGCAAAAGATTACATATCAGCAGGAAAAGAAGGTGCCTCTGCACAATTTAACTTATGAGCTTCCAGTTCTGACCCAAAAACATAAAAATGTTGCAACTGCAAACAGGGCACTAACTAGAGCTCAATTTCTTCAACAAAGGAGAACATAACCTGTGAAAAGTCCCCAAATACCACTGTTGCCATTTCTATTGTGGTCCTGATGTTGAGAATGGTGGTCAGTTACTGGTTTCTGGTGATAGTAAGACTACAACAGAAGGCACTTCAAAGCAGGAAATTAAGGAAGGAAATGAGATAACAATGCACAGAGAGACTGATTTTCCAGGTTCCATGAATGATACTTGTAAAATCGTGCTTGCAACTCCACAGTTTCATATAACAATACCTCAGAGATCAAAAAGAAATGCCTGGACCCTTTCTCCAATTATAAGCCAAACTATTACAAATGGAGTTAATATTAAGGTAGTCCAGCTACAGGAATGGATGATTAAAGTCATCAATAATAACACTGCTATATGTGTAGAAGGAAAACTGACAGACATTACCAACATATATTGGCACAGTAATGTAATTATAGAACGGATTAAGCACAACAAACTTAGAACTTTATCAGGCAACATTTATGTACTAAAAGGAATGATAGACCAAATTTCCATGAAAGAAGCAGGTTACCCAAAATACCTCATAAGGAAATTTATGTTTGGATTTCCAGAAAAATGGAAAGAGTATATTGATGATTTTTTAGAAGAGTTAAGGACTTGTGCAAAGGAAAAAGGAAAGGCCAGACAAAAACAGAAAGCTAAAAGATGTATTCCTGCCATTCAAAAATCAATGAAAAATGATGCAAGGAAAGAAAAACCAGATGTCCTCCAACGAACCACCACCACGTATGACCTTGACTGTGATCCTTTGGAGAGAACTAAAGAATCAAAAGTATCCATTGATATTCTAACATCAAGGGAACAGTTTTTCTCAGATGAAGAAAGAAAATATATGACTGTTAGTCAGAAGAAACCTTGTATTTTAGTGACACCACTTAAATCTAAAAAAATTATAGAGCAAAAATGCATGGACTATAATCTGTCATCTGACTCCATTAAAGCAGTAACAGAATTTGCATTGGGAAAGCCTCCAAAAGAAAGTAAAACAGACTCAAATGAAACTACAAGTCTAGTCAGTAAGCCCACAAAGACTTTAGAAGGTACATTTGAGTGTAGTGTGGGCCATAATAGTGAAAATACGGAAGATTGTTGTGAACGTGATTTCTTCACTGTCAACCACAAAATAAAAATACCCAGTTCTAAAAAAGAACAAATGGTCACCTCTGACTTTAAGAAAAATACAAGGTTATCAAAACTGAAGAAAATTGAAAATCAAGTAACTGTGTCATTTGACAAGCAACAGTCCTCATCAGATTTGTCCAATGAAGAAAGTGAAAAAGAAAAGAAATTTAGAAGGAAAACTGAGATTGTTAAGAAAACCAGAGCAATAAATACTGAAGAAACAGTGGTTCACCAGAGCAAAAGCACAAGAAAAACAAGGACAGTCCCAGTGATGCCTGAATGTGAAACTGAAGAAAGTGAAAATGAACTTTATATGAAACAAAAGAAAGCTAAATGTTCTGCTAAAGAAAACCTTAAGAAACCTGATGTTGGTAATGAACTTCCGAATACCGAGAAAATGGGGTCTAGTAAGACAAACAGGCATTCCTTGGAATGTTTGCCTGGTTTTACTCAGGATGAGTGGAATAAGAAAGAATTACAGAAACTTCATTGTGCTGTTGCATCTCTGCCAAAGCACAAGTCTGGTTTCTGGTCAGACGTAGCTATGGCTGTAGGTTCTCGATCTGCGGATGAATGCCAGAGGAAGTACATGGAAGATCCCCGAGGAAAAAGATTTCAGAAACATGACACCAAGAAAAAGCCAGCCAACCCCAAAGGCAAAAACGGCAAGATCGATGATGCTGATAAGAAGGAAACTATGAAGATAACTGCCAAAGTGGGAACTCTTAAAAGGAAGCAGCAGATGAGAGATTTTCTTGAACAGCTGCCAAAAGATGACCATGATGATTTTTTCAGTGCAACACCTTTGCAGCATCAAAAAATACTGTTACCAAATTTCCAGGACAGTCAAGAAGGGGATGATATTCTGCCAAATATGGACAGAAATCCAACAACTCCATCATCAGTTGTCTTTCCACTGGCAAAAACTCCTCAGTGTCATCATGTCACGCCCGGCATGCTAGACTCTATAAACAGGAATGATTGTGATAAATATGTTTTTCGTATGCAAAAAACCCATAAAAGTAAAGGTGGCACTACCTGGGGCAATATCAAGAAAAAAGCAATGGAAACTGATTTTTCAACTCCACCATCAAGAAGAAAAACACCATTTAACAAAGAATTAGCAGAAAACTCTGGTATTGGAAAACTTTTCACAAAGGCTATGGAGTCTTTAGATGAAGAAGAGAACGATTATTATTTTTCGAATTCTGATTCTGAATAGTATAAATAAGAGAACATGTCCAGGATGTTTATCAAGAAGCAGGCAGTGTATTTGTGTCTTCATCTGAAGTGTATATATTTTCTTTATAGAAACTGCACACTGTTTTTCAAAGGTTTCACGTTTTATGTCTCATAAGCATCTTAGTCTGTTGAGGAAAATCGTGTTCCATACAGGTTTTCTTTTTTTTTTTTTTTTTAAATCATTTAAGAAAATGTTAGTATTGTTAAAGGGAGAGATGGGGGAGAACAGAATATAGATTGTAGCTTCTGAGTTCATGAAAACTTAGGTTAGCATTTGTCACCACTTGGTATACAAGTCAGATCTAATGTTTTAATTACATGTTGTTTAAACCATTTGACAAGCTTTCTCCTGATTGTTTTTCTTAAAGCTTGTGATTGGCACATCCGTGAAACCTATGTAAATTTCATTTATTGCTTTTAAGTATTTTTATTAAGTAGAATGAGAAAACATTTTGTTGTATTTTTAAGCAGACATAGCAAAAATTTGGTCTCAGTATTTAAAAGACTGAGTTAGACAACGTTCAGGTTACAGATCTACTACTGTAAGAAGTCAAGTTACTATGTCATGTCATAATAAACACTGTTTTCCTTTTGGACAGCTTCTTTGGAAATAAACATCTTTTAGCATATTCTGCCATTATGTTTTAAATTGGACATGAAAAATTTTTTCCCTCTGTTTATATAGTACATTACTCACCCTTTCTCTCCAGTTAGGTTGTTCAAATAAAGTAAGTTTGTTTTTATAATATTTGTGTTTTGGCTGGTTTTTCTAACTGCTGGATCATAGGAAAAAATGACCTTTTTGGTTAATGGTTCAGCTCTTTCCTTGAAAAATATCAGAACTTATAGAAAAAATACATTTGTTTCCTGAGAATTTAGTCAGTAATGATCAGCTACTAAAGAACTATAGAATTCATAGAAACACAAGATTTAAAAAGAATAGTGCAGGTAAAGTGAGATCATTCTCCTTTAAACTACCATGATAGTTTCTGCCACAAATATTTTTGCTAGGTGAACGATGAAAAAAATTAAAGGGTTAATACTGTAGAACTTTAAGTTGCAAATATTTGGTGTAATAATGTGCTGTTTGATGTTCACGGATAGTGGTTTAGGAATTTGAAGGTAGTTCAGTTCTATAACAGGAAACAAAAAGGGTATTTTGAAATAGCATACACTTGACATCAACTACAAGGTACCCCCCTCCCCATATTCTCTGTGACCTATCAAGTCTCTGTTCATCCCACCTGCCAGGTACCAGGTTATTCCCATTTCTTTCCATTGGGTCATTAGATAAACTAGTAAGGTTTAAGGTAACATCCAAAGGAGACTTAAAATTGGAAGAGAAAGACTTTGAGGGCTCAAAGGCAGACAAGGTAGATTGATAAACCATAGGGTTGATAAGTGCAACCTGTGGGAATACAGAAAGAGGCTGTTGCAGTTTAAAAATGGATAGACATCTCTGCACAGCAAGCGTAAGTAAATGAAATCCTCTGAGTTATATCCCTCAAACCATGTCAATTTATGAAACACTTTGTCTTCAGCGTGCACACACAGAATCTGAGGACACTGGTGTCTGCATGAGAGAGGCTGTAGGGAAGCCATCAGTCCACGGCAATGTGAGGTTGCTGAGGGAGCTGCGTGCTTCTGGTGTAGCTGGGGCACAGTTCCACCAGACGGCCCTACCCAACACACCCGCTGATACCATGTAGTGTGAGAAGCAGCAACACAGTACACTGGAACCAGAAAGAGAAGCCCCTTTCCTCCTACCTGACAAAGCTAAGAATCATGCTCACTAGGGAGAAATGCTCAGAAAGTCCACTCCACCATAGCACAGTGAGATACTAAAGGATGAATTGGAACCTGAGAGATATAATGAAAATTGCACATCGGCCAATAATTTATATCACTTCCTTTACTCTCTGTAACGGAAACATTTGACAAAATTACTGAACAGCAGAAAGAAGAGATCAACTGCTTTAGAAGAATTCAGAATTTACAATGTCCCAAAGGAGCTAAGTTCACAATCAGAGTAGCTTTTTTAGTGAAAGAAAACTATCTAGTTCTTCGGTTCCTGTTCTAGATTTCCCAGTCTATACTTGAGT EMBV3_22183 CGGCGGCTGCACCGCGCTGGAGTCCAGATCGCCATCATGACGTTCAAAGATTATTTTTAT Gene GeneID:539888|AICDA:NM_001038682:55_cdna Constitutive 0 NULL GeneID:539888 5 GENE AICDA NULL activation-induced cytidine deaminase EMBV3_22980 GTCCAAACAGAAGAAAGCCCTGCCCCTGTACAAAGTCTCTACAGAAATGAAAGAAGTAAG Gene BVT0101_005166 + 0 NULL GK000019.2:45131280-45154664 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097260 TCONS_00097251 TCONS_00097253 TCONS_00097250 TCONS_00097249 TCONS_00097252 TCONS_00097258 TCONS_00097255 TCONS_00097259 TCONS_00097256 TCONS_00097254 TCONS_00097261 TCONS_00097248 TCONS_00097257 1 XLOC_058205 Coding TCONS_00097248 XLOC_058205 Coding Coding GJC1 19:45149963-45157421 j TSS72096 6427 1 TCONS_00097248_3 396 3 0.138527557999195 0.00074742783227418 0.00188112851575203 8.61870995363671e-05 0.00240994225957118 0.00142191792641329 0.000850720979090081 0.000742641921270433 0.00116444940948441 0.00507046713988004 0.000311758505191436 0.000590163707812453 7.40009969523673e-08 0.000627927652483203 0.00257697580039913 0.00143745373638622 0.000586735005165457 1.07668202386723e-12 0.00136905263217871 0.00261293663309309 0.00166101831546406 0.000836433578054258 0.000288400415773298 0.000113130656700743 0.000200015754576163 0.00158056479921628 0.00151220865392738 0.000116528543938146 0.000138678416330702 7.46877504181453e-05 5.6974296701165e-05 XM_005220850.1 GJC1 PREDICTED: Bos taurus gap junction protein, gamma 1, 45kDa (GJC1), 0.0 1.033e+04 100.00 0.89061770655049 NM_005497.3 GJC1 Homo sapiens gap junction protein, gamma 1, 45kDa (GJC1), 0.0 3018 83.63 0.448265131476583 TCONS_00097248_3 sp|Q2HJ66|CXG1_BOVIN CXG1_BOVIN Gap junction gamma-1 protein; 0.0 836 100.00 0.997474747474748 2 coding 0 0 0 0 -0.76719289797872 0.0684640039896723 -0.330669306660452 0.00905135314834355 GTTTCCATCTCGTGCTGATTGATTCCTGTGAGAAAATCTGGAAAAGTTGTAAACAAAGCATCATTTCTCTAAGAAAATTTTGGATAGCAGAAATTCTGGATAACAGGGCGGACCAGTTTAGTCACCATGAGTTGGAGCTTCCTCACTCGCCTACTAGAGGAGATCCACAACCACTCCACATTTGTAGGGAAGATCTGGCTCACGGTATTGATTGTCTTCCGGATCGTCCTTACAGCCGTAGGAGGAGAATCCATCTATTACGACGAGCAAAGCAAATTTGTGTGCAACACAGAGCAGCCAGGCTGCGAGAACGTCTGCTATGACGCCTTTGCACCCCTGTCTCACGTGCGCTTCTGGGTGTTCCAGATCATCCTGGTGGCCACCCCCTCGGTCATGTACCTGGGCTATGCCATTCATAAGATTGCCAAGATGGAGCACGGTGACGCAGACAAGAAGGCCGCTCGCAGCAAGCCCTACGCGATGCGCTGGAAACAGCACCGGGCTCTGGAAGAAACGGAAGAGGACCATGAAGAGGATCCCATGATGTATCCAGAAATGGAATTAGAAAGTGAGAAAGAAAATAAAGATCAGAACCAATCTAAACCTAAGCATGATGGCCGGCGGCGGATCCGGGAGGATGGGCTCATGAAGATCTATGTGCTGCAGCTGCTGGCCAGGACCGTGTTCGAGGTGGGTTTCCTGGTTGGGCAGTATTTCCTGTACGGCTTCCAAGTCCACCCATTTTATGTGTGCAGCAGACTCCCTTGCCCTCATAAGATAGACTGCTTTATTTCTAGACCCACTGAAAAGACCATCTTTCTTCTGATAATGTATGGTGTTACAGGCCTTTGCCTATTGCTTAACATTTGGGAGATGCTTCATTTAGGATTTGGGACAATTCGAGACTCGCTAAACAGTAAAAGGAGGGAACTGGAAGATCCGGGTGCTTATAATTATCCTTTCACTTGGAATACGCCATCTGCTCCCCCTGGCTATAACATTGCCGTCAAACCAGATCAAATCCAGTACACCGAACTGTCCAACGCTAAGATTGCCTACAAGCAAAACAAGGCCAACATCGCCCAGGAACAGCAGTACGGCAGCCATGAGGACAACCTCCCACCCGACCTGGAGACTCTGCAGAGGGAAATCAGAATGGCTCAGGAACGCCTGGATCTGGCCATCCAGGCCTACAATCACCAAAACAACCCCCATGGTTCCCGGGAAAAAAAAGCCAAAGTGGGGTCCAAAGCTGGGTCCAACAAAAGCAGTGCTAGTAGCAAATCCGGGGATGGGAAGACCTCCGTCTGGATTTAATCCTGGCTGGGCTTAGAGCTTGTGCTTTCATAGTTCGTGGTAAGCGGCGGCTCACTGAATAATGACTTCCGTTGAGTAAACATTTGGCTCTGCTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAGCTCAGGGGACTCTGAAGGTGGGGCTGGGACAAGGGGGAGAGAACGGGAAACACAGCGTTCCTGGATATGAGTTCCAGCAATAATACAGTTGCAGAACTTTACATTTGTGTCTTCCAGATCTGGAAAAGAACAGATATATTTAAATCATTCTTGTTGAACGGTTTTTGTATGTACAGTATTATGGTACTTTTTTTTTTTTTTAGTATGAGAACTTTTTTTTGTATTTGTACATTGGACCACTGTAGTTATACTTTTATATTAAAGGGGAAAAAAATCCTTAAGGTAATGCCTATTAGGCTAGTGTTATTACTTTGTTCAGCAAACTCTACCCGGGGTTTAAAGTTTTAATAGATGCTATACACCTAATAAAAAGTGCCTCTCGTGTTACCGGGACGATTTCAGATATGTGAGGAGCTGAAGGGGGATGAGTCAGTTCTTAGCCTCAGAGAGGAAGTCCACGGTAGAAGGAGATCTCTCTCTGACTTGAGAAATCTTTGAATCTTATTCATATGCCCAGAGTTGTATCTAGTCTTTGAAAAGCTATTTTTGTTTCAAGTGATTCACTGCAGGAGTCCTTTAAATACCAAGCCTTGCTTTGATGGTGTGTATGTAACGTCAGTTGTTTCAAAAGTCTGATGCACAAAGGTGTCCTCAACCAGTAGCAGTGTGGAGACTGCGGCTAGAACTGTTCTGAGATTCCTCTATCACCAAGCAAAGCCATGCCTAGAAAATAAGCCCTGATGTTTAGTTGTGGGCCTGTCTGATTTGCCTTAAATCTGAATCAAAAAACCTGCCTCTGGTTTCTTAAGATGCCAGTGTTGAATATTTTCTTTATATGTTAACAATAAAAATACGAAAATTCCCTTCTAGGCTAAAAATTAATCAAAGCCATTTATACTGCATGTGGCAGAAGGCCTAAGTTCAACTTCCTTCTTATCATTTACCATGGAATTTTTATAATTTACCTACTTCTGCCAAAGTGGGTTTCTGCCCAGAAGACTAGTTCAGACCTGGGAGTCTATCTGTAAATAGTCTGAAAGAGAATTTCAGTATTTATTCAGTATAGGCATATCTGTTTGTCAGTGACAAGCATTCATGTTCACATAACACCCATAATTTGCAGTATATTTAACTGCCATTTTCAACCTTCTGTTGGATAACTTTGTTCTCTCTGTCATGTTCACATCATTTGTCTTACAGTTTAAGAGCTTCTGAGTAAGAGCTTGGTAAAGATTTAAAGGAAGGAGATTTTGCTTCACTAGGGAGCATTTCATTTGGGACCTCTCACTCTTCTCTAACAGAAATTTAATTGCAAGCCACCTGTAACTTTGAAATTCCAAGAGTGGGTTTTATTTTTTTGCTCTTAATTTTTAAGTGTCAGTTCTTTGTTATTTAGGAGGGTCTTAGAACAGCATCCTGTGTATAGTTCTTTTTTCTTTGTTCTCCATTTCTCCCCTTCCCCCAAAAAAAATTCAGTTGAAAATTTAAGCTTATCTTCTAGCCATGCATTTACATTTATTTTGCTTTTTTTAATCTGTAAATTTTACCCAAGAGAAGCTCCTCAGGATCTCTAAACACTTGAGCAAAAGGTCACCTCCAGTGAGACTGAAGGGAAAATTTCAGAAAATGACTTATATGTGTATATATCCTGGATAATTACCAGATCTGCACAGTTTCCTTCAAACAAAGTGTTACTAAAGAATTTCAAGTAATCATTCTAAAACAGGCAAGATTTTAAATTATTCAGGCTGGCTAAGATAAAGAACTACCAATAATTCTTATGTCAGTAGAACTTCATGCAGACTTCTGAACTGAAGGACAGAAAAAAATACACGTAGGTTCATGTCCATCTATTCAGAGCCTGAGGGAGAATAGAGTGGTTTTGCCATTGGGAGGGTTGGGAATTTGAATGATAGGAGAGGGACGGAGTCAAGCAAAAATGCCAGGCAGACATTCGGCGCCAGAGGCATCCACTTAGTTTCTACAGGCAGGGCCTCCGGTGTTTCATCTTGGCTTGTTCTGATGAGAATGTTATCTTTTGTGTCTGGATAATTCTTCAACTTCCTCAAGTACATAGAAAGATATTCTGGGTCACCTTCACATGTGTTCAAATCTATTTTTATTCTCTCACTAAAGTTCTAATTATGACATAGATTTCCCAACTCTGACTGCTTCCTTAGTCCATTTCTTTTAGCCTTTGAACATACAAATTTGCCAAAACCATTCTCACCTAATAACATGTCAGTGGACCTACATTAAGAAAATGGCCCTTTCAATGTCTGGCTTAACCCACTGAGTGAATAAAAATATTGTTCCAGTTACTATTCTGGAACTTGCAAGTGTTTGTATAAACAGCATTTTTTTTTCCTATCAAAATCACATTCCTTTGAATTGCTGTATAAGACATGCTGTCTTATGACATGCTTCTCCAAATAGTAGTTGAGTGCTTAGTCCTTCACATACTATAATCAGGATATGGTCAACAACATGTTTATATTCCTTAATATACCATCATTTATTCAGATGTGTGTCCTTTATAAAGCAAACAGGCTTTTTTCCCTTAGTTCAAATTTGAGGGACGAATTAGATAGCATTTTCCTCTAAAGAAATGTTAATGTTCATTTTGTGGCTTCCTTTTGCTTTCTGCCTTAGTTTTGCTAGCTTCTATTTTGTTCATTTAAAACCACAGGCGTGTTATTTCATTAGAAGTCAGTTTTTCTGGGGATTCTCCTTGACTAACATCTATAGAATTACTTTTGATAAAGATGAACTTTGTCATCTAAAATGGTTCTCACAGGTTAGAACTCCCACACATCTGTCTTTAAAAGGACACCTATGTCTTTGAAAAGAAAAATGTCATCATTAGGTACCTTAACTGTCATTTCTTTGTGGTATGAAACTAAGCAATTCCCTTTACTTTTCCAAGTTCCAGTAGCCACCTACCTCTCAGAAGTGTTACGGAGTAGTTAGAGAAAGCCTCTGGTGAAAAGTATTAAAAGACCAACTGTTGGTCATTGTCTGAGCTTGAAGCTTCAAAAAAATCATTGAAAGAACTATGTGATATAGTAAGAAGTCCTTCGGTGCTCTTTATCACAGGAATCAGTTGTTGAAAACACTGAACTTGCTCTAGCAGCTTATTCCGAGAATGGACTTAAATGTTATTCCTATTAGTCATACCTATGGTTTACCCGTTAAGCTTATAAATGTCCTGGCTTTGTGTTTTCCATCTCATTTATGGGACTGTACACTTCTAAAAATAATACCTATAGTTGAGGATAAATTTTTGGCCAGGCAGTGTTTGGTAAAAGGCAAGTATGTTATACTTGAACCTACTTCAAGAAATGCCTTTTTATAAAGCAAAGGTCTTTCCTGACTGTGAAGTAAAGTACCTGAAGTCAGAGATACCCAGTTGCTGGTCATTTTGCTTGGAAGGTTCCAGATATTGATTTTATCTTCATAAAATCATGTAATTTCATGAAGAGTCTTACCACCTAAAAATAAGCTCCTGCACTTATACAGTGCTGAGTTTGGAAATAAAATTTCAACTCACCTACGTATCATAAATCTGTAATAATTCACAGTCACCATCAAATGTTAGAATCATTAGGTTGACTTGCATACTTGTCACTCATTCTGGCCATATATCATGGAGAGTTTAAAAGATTTTATTTGTTGTCTCTAATGCAGTTGTGTTTTTGTTTTTAATAATGGTGTTGAGTTTGGTTCATGCACATTCCATGTTAAGAATCATACTTTTAAAAGAAGCAATCCATGTATTCCAAAATGCAGGAGTCCAAACAGAAGAAAGCCCTACCCCTGTACAAAGTCTCTACAGAAATGAAAGAAGTAAGAGTTCTGCATTTCAGGCTTGGCTTGTTGAACCAGCAAAGACATTTGGCTATAATATGCTTCCAAGACCGGAAGTGTTTTTCTTCATTATACTCTCAATTGTGTTCTCTTCAATAAATCTCTTACAGAAGTCTCTACCTCAGGCACTGTTAGATATGATTAGTGTATTGATACTGAAAAACTTAGCTAGGACTTCAAACTCTTAAAGGTAATTTAAATGTAAAATTCAACTGTTAACTAGCAGTTTAACGTCATGTAATGTTCAGTTTGGATACTGTATGAACAACTAAGGAGTTACCCATTCTAGTGCCAAAGATTACTGGTTACTAATTTCATTCTGTACAGTTAATGTAAAACTTTACACAGTGGGGACAGACTCCTCTCAGGGCCTTGTCTCTAGGAAGATTTTTGTTGGTTCTGAATGTTTGTCATTTCCAAATACAGTTTAGAAGATTCATATGTGGTCTGTGCATCTTTTTCGAAACTTGAAAACTCAACTGCCAGGACGTGTCATTTTGAGGATTTTTACCCCATCCTTTGTATAACATAGTGCCCGAGAGCTTAATGGTTTACACAGGAAACCTGATACGGAAATCTCTTCCAGTACATTCACCTGTAAGTTGATCTCAGTGGGAATGCAGGAGCAGGAAATTTTCAAAGTAGAGGCTTGGACTCAAAAGGTACCACCTGATTTTTCATAGCTGTGTTGGAATTCCTCTGGGATTGCTGTGGCTGAAAGAGTTTGGCATGTTTGTGGCATCTCCATCTGGGGAGGGTAGATGACCTTGAGAGGGTGGGGGTACGGGGGAACACGCCCCTGGGAACAAACCACATCTCTGGCTCCCCTTGGTTCTGGACTCCTGGAGAAGAGTGCCTTCTGAGAGGGATGCCTCTCACAGATGTAGACCAGTCTTGGTGTGACTCATCCACTCTTTGAGAAGAGAATGGTGTGGAGGAGGGCTGAGGAGAGGGTAGCCTTTACTGCAACAATGCCCTCTGTTCCCCCAGACACAGAATCGCTGACAGACTGACAGAACAGGTCGTGCATTGAGCGCACCCTCAGCAGCACAGATTGTAAACTGGTCAGCCAACCATATTTGGTAATAAACGTGTGAGCCATTTGAAAGCTGTTA EMBV3_38615 ATGTAAAGCCGTAATTCTGCCCCACCAAGGAGCTCAGCCTGTCTCTTCTTTTTCTCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07134 CTTCTGGCAGCAGCGGCAATTTGATATCCAACACAAAGGAATGAGCCCCTGCCCCATGGT Gene GeneID:536132|NOS1:XM_002694585:660_cdna Constitutive 0 NULL GeneID:536132 17 GENE NOS1 NULL nitric oxide synthase 1 (neuronal) EMBV3_11345 ATGAGGACATCCGGCACCTGGAGGAGGACCTGCGCAGAAAGTTACAGAACCTGAAGCTGT Gene GeneID:514463|TEKT2:NM_001038103:164_cdna Constitutive 0 NULL GeneID:514463 3 GENE TEKT2 MGC133767 tektin 2 (testicular) EMBV3_12345 TGATCAACCTGTTTCACAAATACTCGGGGTCCGATGACACCATCGAGAAGGAGGACCTGC Gene GeneID:786350|LOC786350:XM_002686002:367_cdna Constitutive 0 NULL GeneID:786350 3 GENE LOC786350 NULL similar to BDA11 EMBV3_00696 CCCGAGACTTACATAGCATCTGCTCTTCTATTACTCTGTCTGGCTGTATGTTGGGTGTTC Gene GeneID:517552|GAD1:NM_001075756:7_cdna Constitutive 0 NULL GeneID:517552 2 GENE GAD1 MGC142602 glutamate decarboxylase 1 (brain, 67kDa) EMBV3_09372 GGCTTCGAGAGGAACTTTGGATGAGCCGTCAAGTAGTGATGGAGAGCTTGACTGTGAATT Gene GeneID:326580|VAPB:NM_001082423:782_cdna UTR3_Alt 2 NULL GeneID:326580 13 GENE VAPB NULL VAMP (vesicle-associated membrane protein)-associated protein B and C EMBV3_13659 TCTCCCATAGGAAGGACCAGCAACGACTAACAGAGGAGCTACAGACGGTGGAGAATGGTT Gene GeneID:616366|PODXL:XM_002686960:8_cdna Constitutive 0 NULL GeneID:616366 4 GENE PODXL NULL podocalyxin-like EMBV3_15448 TGACTGGCAGACTTGGCTGACCACGGGGGTGCCACGGTCTTTTCATTCTTTATGCTCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15589 TCTTTGAGAAAGACGGGGTGAAGGTGGGTAAGAAGAGGCCTTGTGGAGCTCCTCTCTCAC Gene GeneID:532056|PHF19:XM_002689961:17_cdna Constitutive 0 NULL GeneID:532056 8 GENE PHF19 NULL PHD finger protein 19 EMBV3_18354 TGAGTGGGCAAGTGGCATCAAAATTGGGACCTACAAATCAAGATTGCGCCCAGGTGGATG Gene GeneID:781152|LOC781152:XM_002699868:78_cdna Constitutive 0 NULL GeneID:781152 X GENE LOC781152 NULL similar to P antigen family, member 3 (prostate associated) EMBV3_25400 CAGAGAGACGTCCAGACCCTCGCCCTCCAGTCTCCACCACACCCAGGAGCTGCTCTACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34897 ATCTGTGTCCCCTGCATTGGCAGGCAGATTCTTAAGCACTGGAACACCAGGATTCTCCTA Gene BVT0102_091799 - 1 EMBV3_19428 GK000023.2:29072732-29078897 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08601 CTTGTAGCAGCCCTCACAAGCCTGAATGAAGCTCTTGTTTGACTCTCTAAATTCTGAGGG Gene BVT0101_039735 - 1 EMBV3_04733 GK000010.2:65778728-65905384 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18919 CCCTTGGACAGCAGTGTGGAGTTTATGCGGATGAAGATCTTTGACAAAAATAAAGATGGC Variant GeneID:618206|SCGN:NM_001099173:161_cdna 436^570 1 EMBV3_29424 GeneID:618206 23 GENE SCGN MGC159832 secretagogin, EF-hand calcium binding protein EMBV3_40450 GTGGATGTCACTGAGCAGCTTCATTTTAAAGGCTAGTGCTGCGAGATTTACTTGTCTGTC Variant GeneID:100174924|LOC100174924:XM_002690200:57_cdna 322^388 2 EMBV3_00640 GeneID:100174924 9 GENE LOC100174924 NULL hypothetical LOC100174924 EMBV3_05223 ACAAGGGTTGTGAGGGACGGGTCTGGCTAATTTAACTGGTAATTGTCGCTACAGTGGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09172 AGCAGCAGGGAGAAGCTGCCCTCAATGATGCCAAATGCAAGCTGGCGGAACTGGAGGGTG Gene GeneID:539944|KRT84:XM_002687252:94_cdna Constitutive 0 NULL GeneID:539944 5 GENE KRT84 NULL keratin 84 EMBV3_42245 CTTCTGTCTACCTTTTATTCCTCCTCAGAGATGCTGTGAGAGAAGTAAGAAAATATTCCT Variant GeneID:511018|BCAP29:NM_001038075:45_cdna 168^268 2 EMBV3_07305 GeneID:511018 4 GENE BCAP29 MGC133766 B-cell receptor-associated protein 29 EMBV3_37485 CATCTGGTGTATGGCATTCTGTCATGGCGGCCTAAGTGGATTCATATAGTTGCCCAAGGC Gene BVT0102_109956 - 1 EMBV3_36558 GK000011.2:98394705-98400783 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033979 1 XLOC_020212 NonCoding TCONS_00033979 XLOC_020212 NonCoding NonCoding - 11:98398165-98398976 - TSS24978 811 1 TCONS_00033979_2 76 0.361282367447596 1 0 0 0 0 0 0 0 0 0 0 0 1.41133671930776e-05 9.69974786275615e-05 3.5379560891394e-06 0.000284211619845243 7.25947975210791e-05 0 0 0 0 0 0 0 0 0 0 0 0 0.000793522695207358 0 0 XM_001790527.4 FYCO1 PREDICTED: Bos taurus FYVE and coiled-coil domain containing 1 (FYCO1), transcript variant X1, mRNA. 3e-44 183 86.08 0.186189889025894 XM_005265483.1 FYCO1 PREDICTED: Homo sapiens FYVE and coiled-coil domain containing 1 (FYCO1), transcript variant X1, mRNA. 1e-43 181 86.45 0.18249075215783 0 noncoding 0 0 0 0 0.00520758897002241 0.959443435320445 -0.00794183347084328 0.91358430605872 GAGGCCTCAGGAAACAGCCTGCCGACACTTTGGCCCCCGACTTCCAGACAGAACTTGACAAATTAGATTTCTGTTGTTGAAGTCATCTGGTGTATGGCATTCTGTCATGGCGGCCTAAGTGGATTCATATAGTTGCCCAAGGCAAGAAAAGCTTCATAGAGTTGCTGAAATCAGGAGGACTGCTGACAGATACGCCCAGAAACTCTGACAAGGCTCAACACTGACCACTCCCCGAGCACTTGGTGTTATTCAAGGACTACCTGCCCTGAGCACTGTCCGCAGGCACCTTCCCTTAATCAAAGACAGGCTTTGATCCTGCTTCCAAGCTTTCCTAATCCTTTGATGAGAAAGCGCAAGGCCAGGGACTTCCCTGGAGGTCCAGTGGCTAAGACTCAAGCTCCCAAACAGGGGGCCTGGCTTCAATCCCTGGCCAGGGAACTAGATTTCACACACAACTAAGAGTTCACATGCCACAATGAAAAGATCCTGTGTGCTGCAACTAAGACCCCGTGAACCCAAATCAAATTTTTTTTTAAAGAGAGAAGGCACGATACCAGGCACTTTATGATAACTCAGGAAATGGAGGTGATGTCTACTCACTGTTCAGCCACATTTGGGTCAAGAGAATCAGTCTCAGTGGGTGTTTCGGGCAAGGAGGAGCTGGACTCCTGTATCTGGCACAAGCCCTCATCTGTGATGATGGCAAACACAGGTCATCTGGTGGCGTCTGTGTTTGTACCTTGGCCTCAGGCAAAACGCAAATATGCATGTGTGTGTGTATGTGTATATATATAATATGTAATAATATATA TCONS_00026101 . 5' 1808 TCONS_00026101 . 5' 1808 EMBV3_36959 TTTAGCCTGTCTGAGGAAAAATCGACTATGGGGGCGTGTGATCCAACACTGTGAAGGGAG Gene GeneID:539572|LOC539572:XM_002688075:103_cdna Constitutive 0 NULL GeneID:539572 6 GENE LOC539572 NULL similar to hCG21296 EMBV3_04478 CCTCGATTTATTAGGCTTGCCTGCACAGACACTTACAGACTGGAGCTTGTGGTTACTGCC Gene GeneID:516467|LOC516467:XM_002690720:392_cdna Constitutive 0 NULL GeneID:516467 10 GENE LOC516467 NULL similar to olfactory receptor 1317 EMBV3_01358 AAAGACAGGAGGAGCCTTCGCCTCAGTTTCCCCCCAACATAGGCCACCAGATGGGCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11825 GCATTCCTGGGAGCCTGAAGGCCGTGAACGGCCCAGGCTGCAAGCACAAAGGAAGTTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13327 TACCGGGAAGCTCAGCAGAGAAGGCCTCAAAAGCAGAACTCGTAACTCTTCTTGAATACC Gene GeneID:100337096|LOC100337096:XR_083759:2_cdna Constitutive 0 NULL GeneID:100337096 9 PSEUDO LOC100337096 NULL spectrin repeat containing, nuclear envelope 1-like EMBV3_18841 GAAGGCGGTGGAATCAGTCGTCACTTCCCCGTGGCACAAGTCCTAAGTCCCGCTCCAAGT Variant GeneID:515968|GEMIN8:NM_001075731:29_cdna 314^360 1 EMBV3_36841 GeneID:515968 X GENE GEMIN8 MGC140558 gem (nuclear organelle) associated protein 8 EMBV3_23846 GCAGAAATTATACTCAATTCCTTTGCCATGTAGGAGAGCAGAAACGGATCTGTGGAGGGG Gene BVV0102_220279 - 1 EMBV3_05182 GK000007.2:26329744-26697266 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39627 TAAAGGAGACAGATCAGAAGCTGGAGGAAAGCATGGAGATTTGGTTGGCAGTTGGTGGGG Gene GeneID:540666|HDAC8:NM_001076231:8_cdna Constitutive 0 NULL GeneID:540666 X GENE HDAC8 MGC142318 histone deacetylase 8 EMBV3_34089 CAACAGCCACTAGTGGGTTTGCCAGTGGAAAATCTACATCAGGAGACAAGGCTGTATCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42211 CTATAAGGTCCCACATTTGACCAAGGAGTGTCTGGTAGCATTGAGATGCGGGAGAGACTG Gene GeneID:613905|GSTO2:XM_002698471:509_cdna Constitutive 1 NULL GeneID:613905 26 GENE GSTO2 NULL glutathione S-transferase omega 2 EMBV3_00449 GGACCAGCCTCCAGCCTTTTTTCCACCTACCTGTCTCTGGGCTTCTATCTTTGATGGCAA Gene GeneID:100295235|LOC100295235:XM_002689387:40_cdna Constitutive 0 NULL GeneID:100295235 7 GENE LOC100295235 NULL similar to ferritin, light polypeptide EMBV3_38534 TTCATCAGGACTTTTGAACCCAGGGGAACTCGCCACACCTGAAATAAACAGTGGAGCACC Gene BVT0102_393821 + 1 EMBV3_23864 GK000003.2:100503198-100565314 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27481 GTAAGAGGATTAGCTTCAATGATGGCTCTCAATTGGTCATTGTCACCTTCCAATAGCCAG Gene BVV0102_203936 + 1 EMBV3_18854 GK000009.2:56340430-57266909 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00174 CCAGCAGATAATGATAGGTAACACTGTTTGATTTGCCTTTTGATTGTGTCCACTTGGGAC Gene BVT0102_123294 + 0 NULL GK000007.2:43616804-43654008 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11326 ATCTCAGTCCAGCTGAATACCAAATTGAAAGGGCAGGCTCTGGTTGGCCCAGTTAGCTTG Gene GeneID:534647|CDR2:NM_001046383:365_cdna Constitutive 0 NULL GeneID:534647 25 GENE CDR2 MGC128861 cerebellar degeneration-related protein 2, 62kDa EMBV3_29712 CCGCCAGTGTTTATGCCAAATACTACTTTGACCTTCGCTCCTTAGCAGATGACAACAACC Gene GeneID:538167|CCNYL1:XM_002685539:127_cdna UTR3_Alt 2 NULL GeneID:538167 2 GENE CCNYL1 NULL cyclin Y-like 1 EMBV3_24347 CCTGTGGAATTGTGAATTCATACTAAGCTTCTGTGCAGTATTACCATTTGCATCACTGAG Gene GeneID:507165|HSPH1:NM_001075302:55_cdna Constitutive 0 NULL GeneID:507165 12 GENE HSPH1 MGC137965 heat shock 105kDa/110kDa protein 1 EMBV3_03067 GCCTTTACTTAAATCTCAGCTGTCACTACATTTGTTGTGGTTCATCCTGGGGAGAAACCA Gene GeneID:618337|LOC618337:XM_002707752:18_cdna Constitutive 1 NULL GeneID:618337 18 GENE LOC618337 NULL similar to zinc finger protein 665 EMBV3_09127 AACTTCAGTGGGAAACAAGGGTGGCCAACTTCCAGGACCCTGTGGGGCAGAGAAAAGGCA Gene BVV0102_019141 + 0 NULL GK000002.2:130636909-130769169 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33604 TTCACGTCATCCGTGCTCCTCTTCAAAGGCCACTGCCCACAGAACACTTCCTTCTAGACA Gene BVT0102_049143 + 0 NULL GK000016.2:79686042-79921421 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068376 1 XLOC_041666 NonCoding TCONS_00068376 XLOC_041666 NonCoding NonCoding - 16:79772896-79778203 - TSS51200 671 1 TCONS_00068376_1 51 2 0.873916321145873 4.15402967518988e-11 0.000103541993976546 0.000721104638378466 2.20361296148036e-11 7.35794450712309e-05 4.28503361138422e-12 0 1.50396268029762e-16 0 0 0 0 0 2.80407909994849e-05 0 0 0 0 0.00169368780771561 0.00141470887357066 0.00242701932027799 0 0 0 0.00161993472814645 0.00242236782851382 0.00286080250394327 0 0 0 0 noncoding 0 0 0 0 -1.04913730092778 0.0187705509387687 NA NA CTTAGAGACCGTGACATCACACCCTACCTTCCCAGGGTGAGAAGGCGAGCTCTCACAGATTGCACCTCTCTACTCATTTTCCTGGATTCAGGATCCACAGACCTGTGTACAACACGTAAAGGGGACAACAAAGCGAGAGGTGCCCGGGTGCTTTTCCTTGCAAACCTGCGAGGAGCCGGTCACTCTTGTCTGACTGCTACAGCAGCTCACAAGAATTCTCCAGTTGCGTCCCGTGACTTTCCTGCTGACCTCCTGATTCCCTACTGTGACCTGCAAGACGCACCCTCACCCTACTCCCTACTCCCGTTCTGGCCTGACCCTGACCTCACCTGGAATCCACCTGCTCGCCCAGCACGGCCTCATGTCGGCCTTCCCGGCCTTTCAAGCTCTCCTCCAGCTGCGGGGCGAGCTGTCCCCTCTGCCTAGGGTGTCCCCCACCTCTGTCTGCACAGGCGGCTCCTTCACGTCATCCGTGCTCCTCTTCAAAGGCCACTGCCCACAGAACACTTCCTTCTAGACAGACACTTATGTATTGACTTATCTAAGTTGACGTCTGGTTTTGCTTTCTGTTCGTTGAATGTAATACTTTCAGAACATCTCTCATTTTACTACACTCTTCTATTATATGTCTCCTCCCACCAGCACATAGACTCATACTTTTCTCCCCATGC TCONS_00070385 r 5' 1033 TCONS_00070385 r 5' 1033 EMBV3_17328 GCATTGGAATGGGCAACCTGGGACCTGCAGGCATGGAAGGACCCTTTGGTGGTGGTATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09512 GTGGCAGGAGACTCCAAGGAATAGAGAAAACTTGGGTCTTGGATAATGGACCATTTCATC Gene BVT0102_125107 + 0 NULL GK000030.2:133939156-133942712 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248426 TCONS_00248424 TCONS_00248427 TCONS_00248425 1 XLOC_151586 Coding TCONS_00248426 XLOC_151586 Coding Coding TXLNG X:133940351-133984404 = TSS185796 4611 1 TCONS_00248426_2 512 0.0425070483626111 10 0.895555252882956 0.000953937517094513 0.00121018105879236 0.00119806775133795 0.000280704479373984 0.000348668297083994 1.76062730639917e-08 0.000308084129861632 0.000707472144836019 0.00067020952526238 0.000218142880899664 4.16522153514912e-10 1.55237713205794e-05 1.68605860340316e-05 0.000168578464160836 2.37737597541688e-10 0.000131817140038856 1.16762502593568e-07 0.00288302005628782 0.00123260763881346 0.00156864332650722 0.000572688245472421 3.24257656122581e-07 0.00103932707314445 0.00133925045904605 0.000818886292056096 0.00126167483338256 0.000866638146881355 0.000224413783727474 5.62110387517842e-06 0.000392111765627328 XM_002700387.2 TXLNG PREDICTED: Bos taurus taxilin gamma (TXLNG), mRNA. 0.0 3851 100.00 0.462806332682715 NM_018360.2 TXLNG Homo sapiens taxilin gamma (TXLNG), transcript variant 1, mRNA. 0.0 1977 90.64 0.310127954890479 TCONS_00248426_2 sp|Q9NUQ3|TXLNG_HUMAN TXLNG_HUMAN Gamma-taxilin; 0.0 859 86.06 0.998046875 1 coding 0 1 0 0 -1.5095269233245 0.00555374737843617 0.00645157175404457 0.890435678426567 CCCCCATCTCGTCCTGTCCCCTCGGGGGCCAACCTCCTCCGGTCACGTGGGAGCCCTGCATGCGGCGATTGGCGGAGGGGTTCAGGGGCGGGGCGCGAGGCCCGAGAGGTTCCGTGCCCCTTGTCGGGCCGCTTGTTTGGCTGCTGCCGTCACCTCATGGCGACGCGGGTAGAGGAGGCTGCGCGGGGAAGAGGCGGCGGCGCCGAGGAGGCAGTTGAGGCCGGACGGGGTGGACGGCGACGCAGCCCGCGGCAGAAGTTTGTGATTGGCACAATGGAAGAAGCTGGAATGTGCGGGCTTGGGGTGAAAGCGGACATGCTGCATAACTCTCAGTCCAATGATATTCTTCAACATCAAGACTCACACTGTGGTAGTACAAGTAACAAGCATTCCTTGGAAGAGGATGCACGCAGTGACTTTATAACAAAGGGCAGGAGTTTGGTGAGCCCGGCGTACTGCACACGGGAGTCACGGGAGGAAATTCCCGGGCGAGAGGCTCGAACAGATCCCCCTGATGGCCAGCAGGATTCAGAGTGCAGCAGGAGCAAAGACAAAGCCTTAGGAAAAGAAGTCTTATTATTGATGCAAGCCCTAAACACTCTTTCAACTCCAGAAGAGAAGCTGGCAGCTCTCTGTAAGAAATATGCTGATCTTCTGGAGGAGAGCAGGAACGTTCAGAAGCAAATGAAGATTCTGCAGAAGAAGCAAGCCCAGATCATGAAAGAGAAAGTTCATTTGCAGAGTGAACACAGCAAGGCTATCTTGGCAAGAAGCAAGCTCGAGTCTCTTTGCAGGGAACTTCAGCGTCACAATAAGACGTTAAAGGAAGAAAATATGCAGCAGGCCAGAGAGGAGGAAGAAAGACGAAAAGAAGCCACTGCACACTTCCAAATCACTTTGAATGAAATCCAGGCCCAGCTGGAGCAACATGACATGCACAACGCCAAGCTCCGCCAGGAGAACATCGAGCTGGGCGAGAAGCTGAAGAAGCTCATTGAGCAGTACGCGCTGCGGGAGGAGCACATTGATAAAGTATTCAAGCATAAGGAACTGCAGCAACAACTTGTGGACGCCAAACTGCAGCAGACGACACAGCTGATAAAAGAAGCTGATGAGAAACATCAGAGAGAGCGAGAGTTTTTATTAAAAGAAGCAACAGAATCAAGACACAAATATGAACAAATGAAACAACAAGAAATACAGCTAAAACAGCAGCTTTCTCTTTATATGGATAAGTTTGAAGAATTCCAGACTACCATGGCAAAAAGCAATGAACTGTTTACAACCTTCCGGCAGGAAATGGAAAAGATGACAAAGAAAATTAAAAAACTGGAAAAAGAAACAATCGTATGGCGGACCAAGTGGGAAAACAATAACAAAGCACTTCTGCAAATGGCTGAAGAGAAAACTGTCCGAGATAAAGAGTACAAGGCCTTTCAAATAAAACTGGAACGGCTGGAGAAGCTGTGCCGGGCTCTGCAGACAGAGAGGAACGAGCTCAACGAGAAGGTGGAGGTGCTGAAGGAGCAGGTGTCCGGGAGGGCGGCAGGTGGAGGCCCAGCACCACCCGAGGCCCAGCCCTGCGCCACCTCGGCTCCTCCCGAGGAGTCCGGTGCCACCTGGCAGAGTGCCGCCCGGGTTATCCCTGAGGCCGGGTCCCTGGGAGCCGGGCCCGGCATCGAGTCAGTTGACTGAGACCAAGTATGATCACTGTATTGAGAGTTCTATTTTGTGTATAACTTCCTCTGTTAGTAGTAACTTGGTTTTGTGGTGAAAATTTTCTTACTTTTTCTACCATATCTGTATTTTCTTAGAACTACTGGACTTAAGTGGTACAGGAGGCTGCTTGGCAGGTTTGAATAGTTTTACTCTAACATTTTCCTCAGCCATGTTGCACATCTGCCTCATTCCCCTTCATCAGAATGCATGTGCTTATTGCCTTTTTCCCTCTCCCTTGCTCCTTGCACAGAATTTTGTCTGAATTAAAATTTCATTCACCAGGGCTGACCATTACAAGGGAACTTTGTTCTGATAATGGTTCCTTCTTTTTTCCTTCTTCTTTTGGCTGTGCTTTGTGGCCTGTGGGATCTTAGTTCCCCAACCAGGGATTGAACTCGTACTCTCGGCAATGAAGGCACCGTGTCCTAACCACTGGACCGCCAGTGAACTCCCTGATAATGGTTCCTTGATGTGAAAACAATATTCATTTAAATATCTACCCCTGCCAAGAATATAACTCAAAAAAAAAAACAAAAGGAAAATCAAGATGATTCAGTTCAGTCACTCAGTCGCGTCTGACTCTTTGCAACCCCATGGACTGTATGTAGCACGCAAGGCCTCCCTGTCCATCTAAATGCCAATAAAACTGAAGGCTTGGGTCAGAAACAAGCACAGCATATTTGATTCAAATTAGCTTTTTGATATATCACTTGACAAATTGAGATGTCCGCAAGCCTAGAACTTCTGTTTTGGCAGAATATTGTACATAGAGGTATAATTTAAACAAAGTAGTATATATAGGCAAATTATTGGAGAAACAGGCTTACTGTTTATGTGACTAAAAAATAGTCCCATCACCGTTTTCAGGTTAGAAGCGCCTGGTTGGACCACCTGAAAGCCTACAGGGTGGGCAGCCTGGTGGTTTGCTTTTCAGTTGGGATTTTGGGTGCACATCCTCCACTTCCCACGGAGAATTGCCACTAACAGTCCTTTGTCAGTTTAAGACAATGAGGGTAAACCATTGTGTAGCTTTACTTAAGCAGAAGTCCCTCCACTACTTTCTGGCTACTTGAAAGTTGGTGCCCAACTATTCTGAGTCCAACTAGCACAGTTCTCCAGGGTTTTTAAAAGGGAATTTTAATTATGAACATGCTAGCTGAAACTGATTTTATTTCATGTCTAAAACAGACTGGAACCAGCGTTTTTAATTTAAAGGAAATGTGGCAGAGAGCTAAGTAGCCAGGATCTATTTATTACTTACGCTTTTCAGTCTGTTTCTCACCCTTTTCGTAGTTTTTATTCTTTTTTATGGAAAAACAAAACAGTATTATCAAGGTGTCTACACTTGGAATGGGGGACTTCGGAAATGTAGCACATCACTTTTGGATTTGCTCTTTCATAACTTTCCTTTGTTCTTCACAATGTCAAATGTGGTCGAGTTTATACACATCATTAACCAGGCTGCACTGACAAGATTTGACTTTGTCCCTGGTATAATTTGCATTGAAATACTTTATGAAATAAAAAGGTTCTACTAGAACTGATGTTAGCACATTCCACTGAGCAAAACTATCAAACTGACACTTCTTGAATTGCTTACTGGACTGAACAAACTCTTCTGTCCAGTTAGAAGGGTTTTTCTCTTTGTTAAAGTTTTATTTGTCCTGTCACATTCGTGGTCTAAACTGGGTTGAAAGAATTGAAAATTGTCGGCAACAGCGCCTGGAGTGGAGGATTACGTCTAAGCTTCCACCATTGGTCATGTTAATCAAAGGGCCAGACAGTGGAGGAAAAGAAACCCACTGTTATCTAATTACTGTCAAAATGAGTCGGAAGCAAAAACAAACATCCTTCTCCAACAGCCTTTTATAAACACCACCTTTGGCTACTAAATGAAATATTGGACTCATTTCCCTGAGAGGAAATGGAGGTATATATCAGAACTATACTCTACTGTAAAATTAGTACTAATGGTCCCATTTCACAAGCGCTCTGCTGGATGTACAGCTCTTACTGTCTTAAGCCATTTGTGTAGCCGCCACGTTTCTTTGTGGTGCTTGTCCTGTGTGGAAGAGCGTAAAGCTCGGACCTGTTGCATATTTTCAAGGGCTTTATAAAGCGATGTGATTAACAGTACTTGGCCTGCTGCTTTTGGCTTGCTATGTATTTTTAGCTAGATGCTCTCATGGTGTTTAAAGGACATGGATTCTGTCTGGGTGCATTTGGTATCCTTTCAGAATCTTTCCTCTCATTACCCTGTGAATAAATACGAATGGGACCCTCTGAGGAGGACACGCTCCTAGGGCAATCACCTCGCCAGCCCAGCATTGTGGCTTTGTAGCACGCTCCATTTCTACCACATTCTAGAACACAGATGCTACTAAGGCTGGCCCAGGAAAGATCAAATGTCAAATTTGCTTCAACTGCATTTGTTGCACCATCATGGAGTCTTGATGTGTATTATTTATAGTGGCAGGAGACTCCAAGGAATAGAGAAAACTTGGGTCTTGGATAATGGACCATTTCATCCTCAGACTTGTAGGAGTACATTTCTTGGTCTCGAGACCAGTATTTTTTAGTTATGTATGCAACTGCCTTTATTACACCTGGTTATCAATTCAATTCTCAGGTGTTGCAGAAAAATCTACCTCTTTCAGACTGTAGATGGAAATAACTGTGAAAAAATGATGCAGATATCTTCTAGTTTGTGCTAAACACACTGCTTTATTTTTACAGCCCACGTCTTTCATGAGGATACGAATTGTTTAAGAGGCAGTCTTGTTTTGCTTTTCAAAGACATTTTGTAGAGATTTTTCACTAATGTGAATCTGATTTTATCTACTCAATTCTGTATAGATTAAGTAAATATGTATGATAAATTTAACAGCTTCT EMBV3_08808 CCCACCTAACTTCTCACCCCCTACTTTCTCATTGTGGCTTCTTCCTTCTCTTTGACTTGG Gene BVV0102_343990 - 1 EMBV3_41194 GK000001.2:47305083-50157888 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20942 AGATGGCCTCGGTCTTCTATACCCTGGTGATTCCAATGCTGAACCCCTTCATTTACAGCC Gene GeneID:522775|LOC522775:XM_002693742:492_cdna Constitutive 0 NULL GeneID:522775 15 GENE LOC522775 NULL similar to Olfactory receptor 8J2 EMBV3_04942 CTCTTGCTTTTGCTGACTCCTTTTGGTTCCCCTGTTCTAAGTTGTGGCTGAGTATCATGC Gene BVT0102_425324 + 0 NULL GK000023.2:29820612-29842079 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133070 1 XLOC_080993 NonCoding TCONS_00133070 XLOC_080993 NonCoding NonCoding - 23:29830756-29831370 - TSS99451 614 0.130293159609121 1 0 0 0 1.50716544387307e-05 0 8.04100590306526e-06 0 0 0 0 0 0 1.74707657671668e-05 0 0 0 0.000516187540453361 0 8.17292519737867e-05 0 0 0 0 1.49414517498408e-05 8.19117549982286e-05 0 0 0 1.56436111404764e-05 0 5.87516413044654e-05 0 noncoding 0 0 0 0 -0.0454624025811758 0.787036661572015 -0.0404317900184469 0.395007678106034 CTGGAAGATTTTGACAGCACCTGATTTGCATGTTCAGATAATCTGATCAACTGCTCTGTAGTCTGTCTGCATCTATCCTGTAGGGAGACCAGTGTGATATGACCTAAATGGAGACAGTGAGAAATGTATTCAGGATATATTTTAAATATAGCATTAGCATGATTTGCATGTCTTCTTGAGAAAAAAAAAGGAAGACGACTTTCAAGAGAGTGGTATAAACATAGGTATTTATTTTTTCCATTTCACCATCTGCCTTGAAATGACCCCATGAATACAGAAATACCATGTGTGTGGTTTATGTAAACATACTGCTGACATAGAGATGATAGCAGAGCATCATTTAGTTTAACAGGATTGGAGTGAGGGTCAGGAGAAGACACAAACAATTAAGACCACTTGCCTCAAGAATAGAGCATGATACTCAGCCACAACTTAGAACAGGGGAACCAAAAGGAGTCAGCAAAAGCAAGAGGAAAGGAACAGTTGTAAACATTCAAAGGCAACCCTGAAAAAGCATATGATGGAAACCAAACATTCCAATCAAAAAAAATCTTACTGTGCCCCACCACCACCACATTTACCAGACAAGGTTCCAGTGACCTTGAATCTATCAG TCONS_00133075 TCONS_00133074 s 5' 22910 TCONS_00133075 TCONS_00133074 s 5' 23523 EMBV3_26040 TCCTCCCAGCCATGCCACCTGGATGGGAAAATCGCCAGTGTTCTGACATCTCGGAGCCCC Variant GeneID:615158|PEPD:NM_001080318:739_cdna 359^422 1 EMBV3_08423 GeneID:615158 18 GENE PEPD NULL peptidase D EMBV3_36311 GCAACTGCGGTAAGCAGATTTCTGAGTGCTGTGTATTCCTCATGGAAAGTGAGTTGCTTT Gene GeneID:513281|CPD:NM_001101086:31_cdna UTR3_Alt 2 NULL GeneID:513281 5 GENE CPD CPM carboxypeptidase D EMBV3_33996 TGTGCTACAAGGCCGCGGTTTGCATTGAAATCCTATGACTGCCACTGGAAATGCCGTGTA Gene GeneID:504957|LRPAP1:NM_001080225:10_cdna Constitutive 0 NULL GeneID:504957 6 GENE LRPAP1 MGC139402 low density lipoprotein receptor-related protein associated protein 1 EMBV3_17848 GGATATTAAAACAGAGATTCCGGGAGAGGGGCTCAATAGCAAAGAGCATTCAGAAGGTGG Gene GeneID:512635|TTC14:NM_001101960:19_cdna UTR3_Alt 3 NULL GeneID:512635 1 GENE TTC14 MGC143168 tetratricopeptide repeat domain 14 EMBV3_31087 AGATGCTAGGAAGACTCGGGTATTTAAACCATGTCAGAGCTGCCTCTCCACAGGACCTTG Gene GeneID:534176|MNAT1:NM_001105409:160_cdna Constitutive 0 NULL GeneID:534176 10 GENE MNAT1 MGC129127 menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis) EMBV3_32320 CTTAATTCTCAGACTGGATGGACTGGATTCCGGGCACACGGAACAGTGGCCGTCCAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19220 TCAAAAGTTCCTCGCAACCCGCAAACCCCTACAGAAAGAATCTACTGGACCACCCTTAGC Gene GeneID:615915|LOC615915:XM_002686376:175_cdna Constitutive 0 NULL GeneID:615915 3 GENE LOC615915 NULL similar to Uncharacterized protein C1orf177 EMBV3_20649 GCTCTTCCTAGAGACTGAGGTCCTTCTCCCATCTTGAGAAAATCCAGGAGTCACCTTAGC Gene GeneID:613554|COBL:NM_001078036:8_cdna Constitutive 1 NULL GeneID:613554 4 GENE COBL MGC152242 cordon-bleu homolog (mouse) EMBV3_34395 AACTCTTTTTTCAGAGAGAGGTAGTGGGGGAGAGCCCCCCGTAAAGTCAGAGGTTTAGGT Gene BVT0101_001378 + 0 NULL GK000001.2:57192437-57227952 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219194 TCONS_00098956 TCONS_00156814 TCONS_00247212 TCONS_00204180 TCONS_00132809 TCONS_00199292 TCONS_00009827 TCONS_00120346 TCONS_00142959 TCONS_00091893 TCONS_00071024 TCONS_00206254 TCONS_00066112 TCONS_00174930 TCONS_00021799 TCONS_00201621 TCONS_00196907 TCONS_00174931 TCONS_00242573 TCONS_00039279 TCONS_00206255 20 XLOC_132513 XLOC_059200 XLOC_095274 XLOC_151269 XLOC_124364 XLOC_080882 XLOC_120945 XLOC_005380 XLOC_073143 XLOC_087384 XLOC_056664 XLOC_042797 XLOC_124865 XLOC_040830 XLOC_104738 XLOC_012472 XLOC_123266 XLOC_118572 XLOC_149236 XLOC_023097 Coding TCONS_00132809 XLOC_080882 Coding Coding LOC615257 23:26688280-26690858 = TSS99285 1852 1 TCONS_00132809_3 245 0.25 3 0.282499029879705 0.000230189861376876 8.40986065803822e-05 9.82696984830033e-05 7.17421206484414e-05 0.000122629766048199 0.000119750247863656 8.65939013962548e-05 0.0001628778919652 0.000428163647505044 0.000837560635200307 0.000443333722593521 0.000637781019621108 0.000148731666861576 0.000870357288072111 0.00040030720342554 0.00429972551649751 0.00150753438400499 0.00344119198991495 7.35677772506258e-05 0.000309349840721391 7.34891233802112e-05 0.00166384186288598 0.00175439660919951 0.00242824707230381 0.000118467549760973 0.000261225411348455 0.000285259164908161 0.00142582211898723 0.00143405661643216 0.00137997367182381 XM_002697375.3 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 0.0 2522 100.00 0.754319654427646 NM_001732.2 BTN1A1 Homo sapiens butyrophilin, subfamily 1, member A1 (BTN1A1), mRNA. 4e-09 68.0 65.49 0.179805615550756 TCONS_00132809_3 sp|P18892|BT1A1_BOVIN BT1A1_BOVIN Butyrophilin subfamily 1 member A1; 2e-57 194 51.40 0.726530612244898 2 noncoding 0 0 0 0 -0.0487859337043163 0.741666882883467 0.025132913440539 0.618495538823466 TCTATCTTGAGTCTTGTCTCTAGTGCAGTAGGATAGGATGGGAAAACAAAATAAAAATGTCTGTAGTCAGCAAAGAAGAATTTCTAACACTACCTTCTAAATTCTGTAATTTCAGTGAATTGTCTTTGAAGGGTAAATGATGAGTGATTCAGCATATTTTTTCTCCTTTCTTCCTTTCTTCCTTCTCATCTTTACTTAATCTTCCTCACCCTCCTCCAATATCCTTCTGATCTTTTGTTGCTGCTTTATTTCTACCTTTCCTACACCTGACCACTTTTATTTTCATGTTTGAAAAAAACAGAATATGAAGATAATACAGGATAGAAAGAGAAAGCCCAAGGGATTCAAAACAAGAAAGGGAATAAAGAAAACAGAAAAAGAAAACAATAGTAAGAGAAATCTGGTAAGGAAAAAAAAGGTAAAGGGTTTCCTATTTTGTTCTTTTGCAGCCTGGAGGAATGTACCATTATACCCTGATTGGAGGAAAGAAGAATTCAAAGCTGTAAATATGACCCTGGATGCAGCCACTGCTCATCCTGCCCTCCTCCTGTCTGAAGAAGGGAGACAAGTTTCCTGGCAAGAAAGATGTCAAGAAATTCCCAGCTCCTCAGAGAGATTCAGCTCCATTCCCTGTGTGCTGGGTCAATTGTGCATCATCTCAGGGAGATACTCCTGGGACATAGAGGTTGGGGACGCCTGTTCCTGGGACCTGGGAGTTTGTAGGGATAATGTAACAAGGAAGGGTAGGGTCACAATGTCCCCAAAGAATGGTTTCTGGGCCATTAGGTTCTATGAGGGGGAGTATTGGGCCCTCACCTCCCCAGAAACCCCTCTTATTCTAAGAGAAAAACCCGTTATTGTGAGGGTATTTCTGGATTATGAATCTGGAGATGTATCTTTCTATAATATGACAGATGAATCCCACATCTTCACCTTTCCCCAGAACCCATTCTATGGTGTCCTAAAACCACTTTTCAGACTTTGGTCCTCTGAGTCAGGCTCCCTAACCATCTGTGTAGGTGAAGAATGTGCGATGTTGTAATTCATATGTCTACCCCACTCCATGAGAAATGATTACTTTGATCCCCGATGAAAATCACAATTCTCCCCCAATGAGATACAAATAGATATTTTTCTTATTCCTTACTTGTTCATTCTCAAGATGAAGCTCTGGACACAGACTGATGATTGCCTCATATCAATTCCCCCTTCCTCTTTATTTTATCCTTCTTTATTTATTTATCCTTCTTAAATCTTCTTTATTTATCCTTATTATTATACTTTCCTATGACAGCTAATATAATATAAATATTAGATTTCCTTATCTCTCTACTGAAAGTGAATAAATGATGATGCTGTATATCAGCTGAATTATAAGGATGTGTCCTTAAAGGTAAATTGTGCGTTTCTATTCTTCTTTACTTTCTGCTGACTGTAATATATCATGATGGCTAGAACTCTGTGGGGAGTGAGCTCCTCCCGTGCCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGTGGGATCAAGCCTCAGGAGTCCCCCTGGAAATTCTCGAGCATCTACCCCCAAAACCAAAGTCTGCCTACTTTCTGCCTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTCTGAAAAAAGAGTTAGCTTACAGCTCCAGTTAACAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCTTTGGAAATCCTCTAGCCTGCCTGAATAGGTTTTTCCAGCCACATGTGATTGCTCAGAGCCTCCCAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTTA EMBV3_23760 TGCTGTTCAGTCCCGCATAACCAGTCCAGCCAGGCCCCTTTTTACTTGCAGGAAGAATGT Gene GeneID:531384|HES6:NM_001075949:11_cdna Constitutive 0 NULL GeneID:531384 3 GENE HES6 MGC140381 hairy and enhancer of split 6 (Drosophila) EMBV3_31014 TTGCTGCACTGTCTAACATGCAGAATCTTAGCTCCCTAACCAGGGTTTGAACCCTTGCCC Gene BVT0102_146224 + 0 NULL GK000009.2:92754418-92828071 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16267 TGGTGGCAGGGAGTGGATGGAAGGGATGGTGGTAGATGTTATCCCCGTCTCAATGTGTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42985 GGACCGTCAGCTTTTTTCAAAGGATTTGTACCTTCCTTCTTGCGACTGGGATCCTGGAAC Gene GeneID:281561|UCP1:NM_001166528:5_cdna Constitutive 0 NULL GeneID:281561 17 GENE UCP1 NULL uncoupling protein 1 (mitochondrial, proton carrier) EMBV3_31818 GAGAGACACACTCCTGCACACACAAGTTACCACAGGGGTCGGGTTACTTTCTTCAAGGCA Gene GeneID:507518|EXOC6:NM_001101885:90_cdna Constitutive 0 NULL GeneID:507518 26 GENE EXOC6 MGC152212 exocyst complex component 6 EMBV3_13430 CAAATAGATGAACCAATTTGAATCTTCCTAGCATGTTTGTTAAGTATGTTGATTGCTTCC Gene BVT0102_276407 + 0 NULL GK000014.2:32798840-32840187 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053139 TCONS_00053140 1 XLOC_031663 Coding TCONS_00053139 XLOC_031663 Coding Coding MYBL1 14:32837380-32870162 j TSS39272 3369 1 TCONS_00053139_3 492 14 0.89765412891614 6.95723642605223e-20 5.7134505723169e-12 5.18131613408536e-06 1.49404147292415e-14 2.35358911166614e-16 3.74916140442562e-90 2.11822991422681e-05 1.96864970500234e-05 2.32932913582873e-15 8.42565127196549e-24 6.60505905275523e-05 3.59620691334667e-05 3.47446058110119e-05 0.0001724959843208 3.27783969203398e-05 0.0012720930307085 0.000985899110612314 0.000493514632631837 6.41889366527363e-56 1.63338389223049e-05 4.88594683542145e-52 0.000293414662237765 0.000944187614118571 0.000608718500852949 1.42846867324307e-19 9.6990258375947e-14 2.21509598474753e-24 3.62081395848599e-05 0.000158112772264231 1.78826893039939e-14 NM_176635.3 MYBL1 Bos taurus v-myb myeloblastosis viral oncogene homolog (avian)-like 1 (MYBL1), mRNA. 0.0 3103 98.11 0.526862570495696 XM_005251251.1 MYBL1 PREDICTED: Homo sapiens v-myb avian myeloblastosis viral oncogene homolog-like 1 (MYBL1), transcript variant X1, mRNA. 0.0 2549 91.49 0.526862570495696 TCONS_00053139_3 sp|P10243|MYBA_HUMAN MYBA_HUMAN Myb-related protein A; 0.0 848 89.51 0.930894308943089 2 coding 0 0 0 0 -0.187850926019071 0.498630747727887 -0.0114477818808567 0.834353488942702 ACAACCATTGAACTGTTTGATTGAAAACTAATTGCTATTCATTTTCAGAATCGTTCTGATTTTCAATGCCAACATCGGTGGCAGAAAGTTTTAAATCCAGAATTGATAAAGGGTCCCTGGACTAAAGAAGAAGATCAGAGGGTTATTGAATTAGTTCAGAAATATGGGCCAAAAAGATGGTCTTTAATTGCAAAACATTTAAAAGGAAGAATAGGCAAGCAGTGTAGAGAAAGATGGCATAATCATCTGAATCCTGAGGTAAAGAAGTCATCCTGGACAGAAGAGGAGGACAGGATTATCTATGAAGCACATAAGCGGTTGGGAAATCGTTGGGCAGAAATTGCCAAACTACTTCCTGGAAGGACTGATAATTCTATCAAAAATCATTGGAATTCTACTATGCGGAGAAAAGTGGAGCAGGAAGGCTACTTACAAGATGGAATAAAATCAGAACGATCTTCATCTAAACTTCAACACAAACCTTGTGCAACTATGGACCATTTGCAAACCCAGAATCAATTTTACATACCTGTTCAGATCCCAGGCTATCAGTATGTATCACCTGAAGGCAATTGTGTAGAACATGTTCAGGCTTCTTCTGCCTTTATTCAGCAACCCTTTGTAGATGAAGATCCTGATAAGGAAAAAAAAATAAAGGAACTTGAGTTGCTTCTTATGTCGGCTGAGAATGAACAACCTGGAAGCTTTTCTAGCTGGCCTGGTAGTTTCCTCATGGATGACAGCATGTCTAATACTCTAAATAGCCTCGAGGAGCACGCTAGTGAGTTTTACAGTATGGATGAAAATCAGACTGTGTCTGCTCAGCAGAACTCACCTACAAAGTTCCTGGCCGTGGAGGCAAACGCTGTGCTGTCCTCTCTACAGACCATCCCAGAATTTGCAGAAACTCTCGAACTTATTGAATCTGATCCTGTAGCATGGAGTGATGTTACTAGCTTCGATCTTTCTGATGCTGCTGCTTCGCCTGTCAAGTCCACCCCAGTTAAACTAATGCGAATTCAGCACAACGAAGGTGCCATGGAATGTCAGTTTAACGTCAGTCTTGTACTCGAAGGGAAAAGAAACGGTTGTAATGGGGCAGACGGCGAGGCTGTTCCTTTGACCTCCCCAAGTGTGCCTAAGTTTAGCACTCCACCAACCATCCTCAGAAAGAAGAGAAGAATGCGAGTGGGCCAGTCCCCGGGCAGCGAGCTTGGCGACAGCTCATTCAACGACGGTGGTCACACAGCACTAAAGCACACACCGATGAAAACACTACCATTTTCTCCTTCACAGTTTTTCAACACATGTCCTGGAAATGAACAAATTAATATAGAAAATCCTTCATTCACATCAACCCCTATTTGTGGGCAGAAGGTTCTCATTACAACTCCTCTTCATAAGGAAACAACCCCCAAAGATCAAAAGGAAAATGTAGGGTTTAGAACACCTACTATTAGAAGATCTATATTGGGTACCACACCAAGGACTCCTACTCCTTTTAAGAATGCGCTTGCTGCTCAGGAGAAAAAATATGGACCTCTTAAAATTGTGTCACAGCCACTTGCCTTCTTGGAAGAAGATATTCGAGAAGTTTTAAAAGAAGAAACTGGAACAGACATATTCCTCAAAGAGGAAGATGAACCTGCTTACAAAAGCTGCAAGCAAGAGCATACTGCTTCTGTCAAGAAGGTCAGAAAATCACTAATCTTAGATAATTGGGAAAAAGAAGAACCAGGTACTCAACTGTTAAATGAAGACCTTTCAGACTTGCAGGTTACAACAGTTGCTTCAGTTGCCTGTTTTAGGTGTTTGCACTTACTTTATTTCTTCTTGAAAGAATGTCTTTATTTGCTTTTGTGTAGAGATTTTATGTAATTTTTTGAAACATATAATGGTATGCTGTCAACTTAAACACTGACAGGTAAATAGAATTGTACACTGTAGTTGTAATTATTTGTAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGAAAATAGCAGAGTCGGCTTGCTGCTATGAGAGAAGGAAAGAGCGACCACCACTTGCACTGTGTGAAAACATAAAAAGTATGATGATGGCAAGTTCTCAAGTTAACTTAATGGAATCAACCATTACCAGGCAAATTCTTGCAAATACCAAAATGCTCTGCCTTAAAACAAAAACAGCTTAAGATTCTCTGTTGATGGAAATGGAAATACGAAGTATTTTAATGCCTAGCTTTTGAACAGTAGACCTAAAAGGATTTTAAGCTATTTAAATCTACTTGCTCATTTTTGCATATTATATGTAGTGAGAAGTGAAGAAAATGTGTGGTACTAAGATTATGCCTTGTTGATAACAAATAGATGAACCAATTTGAATCTTCCTAGCATGTTTGTTAAGTATGTTGATTGCTTCCTAATTAATGAACTTCTCACAGAAATTTCACTTTGTAAAACCAATGATTGTAGCAAAATCATACTGGATCATTTCAATTTCAGTTACCTTGAACTAATAGCACATAATGGTTCCCTTTTATCTTTTCTTTTTTTTTAATGTAGCCCTTGGCTGGTTTGGATGTACATAGTCTCCAATTACCAAAGTATAATATCTTGGAAGAGCTATATTTTTTAAAGCATAGTTTTTTTTGAGCATTAAATTATCCCACATGTAATATATTGCAGATAAGCTTGGGATTTTTGGACATAGTACATATTTCGGTTGGTATTGGTTGAATCCTCCAGTTAACTGCTTTGTTGCTTTTTGCAAGAAGATTTTTTCATCTTAAACATGTCAGGCATCTTAAATCACCTTTTATACTGTTGTGTTCAATTTGAATTTCTTTCAGTATGTTAAAAATGCCAGACATAACATGTAGCAGCCATACTTGCATGGAAACTGACTACACATATAATACTGCATTTTGTTGTAAGGTTTTTGCATTAATACAGCCATTACCCTGACTAAATTGAGTTTTTTGATATATGGGAAAAAACTTTCCATTGTAAGAGAATCTTGCATACAATGTTGACTGTTAACATCCAAAATAAAGCATCTGTGTACAAGCTGTCATGGCATTGCTTATTCCACTCAGATTTTGTATTGACTGACCCTTGAAGGACTTAACCCAATATTCTGTGCTTAAACCATTTTTCTCCTTTCAGGTGATTTCATCTGTTAACACAACTTGACCTCTTTACTCAAGAAATGAAAATACATTTCCAATTCTTGAGCCTCATTTAGAGCCATATTTTCAACTGCCTTTAGAGATTTCCATGTGACTCTTCTGTCAACACCTTAAATGTCGGATGTTCTCTTTTTCTCCAGCTTGAACCTGCGCCTCCTTTGTTCTCTTAGTGGTGTTACCCCTTC EMBV3_35115 CCCCCGAGCCAGGGACAGGAGAAGTCGAAGAACTGAATGCACTGCAGGAAGAGCTTGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32059 AGAAGGAGCTGCAGCCACCTGCCCCATGCAACCACAAGCAGCGGCTGGAGTGTATCCTGA Gene GeneID:517007|CHTF18:XM_002697905:516_cdna Constitutive 0 NULL GeneID:517007 25 GENE CHTF18 NULL CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) EMBV3_10463 GCGAGATGGCACGGTGTTACGACTGCAGCAGGCAGATGTTATAGTCACCGATCTTGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28775 CTGCCTCCCTCATCCCCAGACTCCCAGACCAGGTCCTTGGAGTCTCGAGGCTGAAACCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26653 CTCCTTTCAAACTTGTTAGCATTTGTCTTACGTACTGTGGTGCTCCCGTGTTGGGTGCAT Gene BVT0101_076919 - 1 EMBV3_39195 GK000005.2:76808970-77370782 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210178 TCONS_00233373 TCONS_00218178 TCONS_00010367 TCONS_00141615 TCONS_00218852 TCONS_00048822 TCONS_00056147 TCONS_00250553 TCONS_00019991 TCONS_00189806 TCONS_00165811 TCONS_00032587 TCONS_00197973 TCONS_00141355 TCONS_00250544 TCONS_00239410 TCONS_00177994 TCONS_00141464 19 XLOC_128688 XLOC_142855 XLOC_131641 XLOC_005918 XLOC_086043 XLOC_132171 XLOC_028953 XLOC_033950 XLOC_153496 XLOC_010669 XLOC_115843 XLOC_100651 XLOC_018827 XLOC_119632 XLOC_085783 XLOC_153487 XLOC_146076 XLOC_107767 XLOC_085892 Coding TCONS_00141464 XLOC_085892 Coding Coding - 24:13078099-13078486 - TSS105675 387 1 TCONS_00141464_1 53 0.542635658914729 1 0 0 2.83253780341979e-05 0 0 1.27575724318509e-05 6.60216879481446e-07 3.01379802299502e-05 0 1.01939646212358e-05 7.44223301774677e-05 0.000146894494831322 0.000569255641694733 0 7.5968945986056e-05 1.88537212597916e-05 0.000608535645591701 0.00653699127563033 0.00505169453433983 4.32355708183839e-05 5.70748263810496e-05 7.84426278142317e-06 0.00300172795423331 0.00258605302740734 0.00499617686309784 0 9.10267748717562e-06 1.51399295314244e-05 0.000198556584232709 0.000296879423086287 0.000176069409830224 XR_082750.3 LOC618220 PREDICTED: Bos taurus ribosomal protein L6 pseudogene (LOC618220), 9e-79 297 98.82 0.434108527131783 NM_000970.3 RPL6 Homo sapiens ribosomal protein L6 (RPL6), transcript variant 2, 2e-50 203 85.47 0.459948320413437 TCONS_00141464_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-13 63.9 52.83 0.981132075471698 0 noncoding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 GATCAGAAAGCTGTGGACTCACAAATTCTGCGAAGAATCAAAGCTGTCCCTCAGCTCCAGGGCTACCTCCGCTCTGTGTTTGCTCTCACAAATGGAATTTATCCTCACAAAGTAGTGTTCTGAACTTCTTGCAAAGAACCTAATTAAATAACTTGTCATTTCAAAAAAAAAAAAATAAATAAATAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGCCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACC TCONS_00138548 TCONS_00138549 . 3' 117911 TCONS_00138548 TCONS_00138549 . 3' 118297 EMBV3_19158 GGGTTTAAAATAGGTCAGAAATTGAGAGAAAATCATTAGTTTACCTCACATAAGTGAGGG Gene BVV0102_178300 + 0 NULL GK000004.2:36807491-37146884 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41508 TCATCAAGCAGGCAGACAGGCAGTGAGCTGTGATTACCTCTTGTGCTTTGAGGCAGAGCT Gene BVV0102_326593 + 0 NULL GK000015.2:29795654-29837811 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33334 CAGCCTGTTCCCCCCAAGTTGCCCTTTTCTGTACGAGTGAAGAATTGGTCCCACAGTGTT Gene GeneID:537266|ZMIZ2:XM_002686883:79_cdna Constitutive 0 NULL GeneID:537266 4 GENE ZMIZ2 NULL zinc finger, MIZ-type containing 2 EMBV3_25815 GGCCGACAGTGTTAGTGGGACCCCCAAAATTTACAAGATGTTAATTCGGACCACCTTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12675 CTGGGGACGAGACCAATGTAGGTTTAAATTCTAACTATGCTGCTTGTAAGCGGGCACCGG Gene BVT0102_024776 - 0 NULL GK000011.2:82697433-82824014 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33578 AGCCACTCCACCTCCCCGACGGGCACCCTGTTAACTGTAATATACTTCTGTTGCCAAATA Gene BVT0102_089010 + 0 NULL GK000001.2:929994-944293 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005862 1 XLOC_001425 NonCoding TCONS_00005862 XLOC_001425 NonCoding NonCoding - 1:933313-937944 - TSS2939 4631 4 TCONS_00005862_4 89 0.1032174476355 1 0 0 0 0 0 0 5.40690556718715e-06 0 0 0 0 9.88634621268603e-07 1.00375663462998e-05 0 0 0 0.000450554097954422 0.00050190354237644 0.000476786649144058 1.70330862648248e-05 0 0 0.000131395914165037 0.000144613626019627 0.0003439088594686 0 0 0 0 3.35451319366038e-05 1.55790760966264e-05 XM_583188.7 LOC506707 PREDICTED: Bos taurus zona pellucida sperm-binding protein 3 receptor-like (LOC506707), mRNA. 3e-34 152 89.17 0.0250485856186569 NM_010587.2 Itsn1 Mus musculus intersectin 1 (SH3 domain protein 1A) (Itsn1), 4e-90 338 76.47 0.106024616713453 0 noncoding AGCACATAGAAACGGGGGGAGGGAAGTGATGAAATGCTTCAAACACTGCCTTGTGTGCTCATCAGAGATGAACCCAGAGATCTGTGTACAGTGACAGTCTTCATGGCACTTTTTTTAAATCTAGATAAAAATTTTAAAGCAGCCTCAACACACAACCATTCAGGATTCTTTTTAAAACATAGGGTAAATTGGAATATATTCAAGCAATGGGATATTATGCAGTTCTTAAAAATCAAGATGTTCAAAAACAGATAGATAGATGACAGATACAGCTGTATAGTGGAGAAGGAAATGGCAACCCACTCCATTCTTGCCTGGAGAATCCCATGGACAAAGGAGCCTGGCGGGCCACAGTCCATGGGGTCACCAAGAGTTGGACACGACTTAACAACTGAACAACCAAACAGTCTGCTCAGAAAGGAAGAGGGGCAGAAAGAACCCAAAGCAATCCATTGTAACAAGGTTGGTTTTTCTCCTTTTATTCATGAACTATGTGAATTTAAACCGTACAGGTCAAAATGACCAAAGAATTGTTTGGAAGAGATTGTTCTTTTAGATTCCAGATACACAGAAATATCCATCTGTATTGATGTTGCTACTGGTTTAAAGAAAACAACACTCAGTTACCATAATCTTGATCAGTCAAATTTAACATTTCTTACATAATAAGGTGCCAAAGGAATGCTCAGAGAGCAAACCTAACCTTAGCTTCTTTTAAACAGAAAAGAAACCTAATGTCTTGGCCCTGCTTCATCAAACAAATACAGAATTCTACAATTTATAATAGTGTCTAGTAATTTTTGGAACTCCATTGACATTACACACCAAACAATATAGTCTCCCTTTGATGGGAAATTAAACAATACCGTTATTTGGCAACAGAAGTATATTACAGTTAACAGGGTGTCCGTCGGGGAGGTGGAGTGGCTCATCCCACCCCCCGGGCAGGGCTGTGAGGGGAGCAACATGCCCCCAACACTGTGACCCATCTGCTGCTGGAAACACAAGGGACTCGTGTCAGGACCGATACATTCTTTTCTAAATAGGTGAAGGCTAACTGGAATGGTCACTGCTGAGCAGGACGCCACGTTCTCTGGCTTTTCTTGACCCCAGACTTTATTGGAACAAGCAGGACCCAAGGGATGGTTGACTGGCTGACTCATCTCCACGTATAGCCCTCTTGCCACACCAGCCATGAGGACTTGGTGCCAAGGAAGGAGGTCAGGACTTACTCTGGGTGGGTCGATAGGAGCTTATCCACTTCTGCTGGCTAGCTTTAGATGGCCTTCCCAGGCCACCTTGGACAAAGAGGTCCCTAAACAGCTCCATGTTTGGAAAAGAAGTCACTCACATCCACCCAGACAGTTCCTCAAGGTGATTTTCAGATCACTCCTATGATAACAGATTCCACGAAGCTCCCAGAAATCACAGCTCCCTGCGCCCCCTGAACCCTGAATTCCAGGAGGTCACTTACACGCCAGCATTTGCCAATTTGAGGTGTATCAAAAAAGGACTTGGACTGTTGGTTGACAGCATTGGGAAGCATACAGCTCATTGAAAGAAATGTTGAAAACCTAAGGCACGCATTCCCTATACGTCCTTTCAAGCCAGGGCCCTCAGCGTCCCACACACAGCGATCTGTATGCAACACCCGTGGCTCACCAGGAACATGGCTTTTTTCACCGCTCCATCGTTCCCAGCCTGACGAGGGAGGCTGACCTGACAGCGTTGCCTCCTCCTGAAAGGACCTCTAAACGCACCTCTCGGGGGTTTGCATCTTGAGTTTCATAGGATTTTGCGTTGTATCCATCCTTAGGTGGCCTGTGGGGACATTTCCGGTGGCAAAGGATACAAAGTCTGTGCCCGAGAAGCAGCCTGGACCTCTGACCCTTTTCTGGGACAGGGCAAAGAGGAAGGCCTCTTGCTTTGAGGTCTCCATCATGGACACAAGCAGCTAGAAGGCTGCTCTGTGCTGCCTGTCCTGTGTGCCAGGAACAGCTTAACCCAGAAAGCCCCAAACTTCATCCTTCACCCAACACAGGAGAGCCACAGTGGGGATAGTGAGGATGCCTCCAGGAAAGGAAAATGCAAACACCAAAGGGATGCATTGAATCTATTCAGAAAGAGAACTGCAAAGGGTGACCCAGAAGTCAGGACATTCGGAACTTTCTAGAAGAACGATTGCTCCACCCAAGATTCCTGGCCCATCCTCCAGAACCTATGGAAGCTTCCAGAGCACATCACTCAGATCTGATGGGAACCAGACTCTCAAGCCTCCTATCCTTCCTGACACAAGCACCTTCCCGAACAAGTTACCTGTTTAATGAAATACAGGGGTCTCACCCAAGGTCATGGCTAGAGGACACTCATCATCTTATCATAACACCACCCGTTGCATTCAACTTCACATTTTCTTTGCCCCTCCAAAATGACTTCTTTGAATGTCTAACATATGCAACTCTGGTTTTCTTTTTAATATATGAAATTTAGTTGGGTCGAACCCAAGTAATCTGATTAAGCACTCTCTACTCTTGGAATAGGTTTTTTAACTTTTTCTATAGTTTTATGCACTTAAATTAGATTCCTAAAATACTCTCATATACATACAGAAAAATAATCTCTCAATGACAAATCACATTTTACAATAACAAGTCAATTATTTATAACTACAGAATCTGCATTAGTTTATGCAACACTTAACAGCATCACCTCTTACACACCATATGTACATTGAGTCATAGACATTCCCATAAACTTACGGCAGAGATTTCTGGACAAACCATTGAAAGAGCATAACTTTTTCCACTTTACGTAGTGGAATTCTGCATTTTTCTTAGCTGCAAACTATATAAAATGCAGAAAACCAAGAGCTGAGGACTGCTTATCATACACGGGACATTCTGTTGCAGACTCTCATCTGTATACATGTATTTACACATATGCTAACCACCTATAGATGTGAAGATATACGCTGATGTAGCTAAGGCAACAGGACATGAATTATGAGATCGCCAACTTCTCTGTCCAGGTAGGACTATGAAAGGGTAGAGAAAGGGCCCAAAGGGTACAGATCTCAGCCTGCTTGGGCTTCAGCAAAGAAGATCTGAAGTTGGTTTTACAGTTTAAAGACACTTGGGCTATTGGCAATGTACATTTTAAATGCATGTGTTAAAATAATTATCGTTACCAAAGATCTTGCTAGAATATCTACTGTCTGATACTGAATATTTACCAGACAACATTTTAAGATGTTGATTTGTACAATGTACAACAAAATGTTCACTCGTGAAAACTAACACTGACACAATATTAATTAAATGCCTCTAGAAAACACTTTCTGAACTTTCAGTAGTCCGGATGATTGCAATACAAGTAGAAACAAAGCTATAATTTGTTATTTCATTCAAAATGACACAACCAAACCCATGCAAGATGAATTTGATATCTCTATTCAACTTTCTGTCAGTATTTTTACTTAGCAAACTTTATAATCCCAGACAGAATCAGGAAACATAGACAGGATTATTGCTCTGTGTAGGTAGACGTGAAACTGATTTGCAAAGGTCAAGCAAAGGTTTTGGAGTGTCCTGCTAAGCGCTAGAAAGTGCTAGTGAAAGAAAGTAAGACCCAGCACACAGGGGGAGGGGCGACTCCCGTGTCAGCTGCCTCCCTGGCAGCTGGTCTTCTAGAACCCGAGGCTACTCACACAGTGGGGTCTCTCCTCCCGTCAGCCCCCTCATAGGCGGGATCCTATGGCAGACACCCCAACTGGGAAGTAGCTGCATCTCAGTAGCAGGTACCTGCAGACACCTGTGTACCCAGCACCCAGCCTGGGCAGGCTTCACTCTCTCCAGGAAGAGGAGATGGAGGAGCAGCATCCAGCCCCGGGGAAGGGGCACCGGGCACCACCCACCCCCACCAGCTCCCTGCTTCTTGTTGCCATCACTCAGATGGTCACTTGGAAGGCAGAGGCTAGAGGAGCCTGTCTGATCCACAAGCAAAGAGGAGAAAAGCCCCCAGTGGACGACTAAAAGGAAGGGTTTTATTTCCGATCAGTGGGTTAAATGGTAAGGACTTGGAGGACTCTCGGCACCCGTGGCCCGCCCTGGACTGGGAGCCCACAGACCAGGTTCATCTGTCATCTTGGGGCTTGAGTCCTTCACCTCTGACTGATCCAGATCATTTGTGCTTTTAAAAGCAGACATTTTGAAAAGTGTTACCAGCCCAGTTCTCCACAGCCTGCCAGGGAGACTTTGCAAAGTAAGAAGCAGAAGGTGAAGCCCCACCTGCTTCAGAAACCAACTGAAAAGACAGTGACCAGGGCCGGCTTCGTGGGCGTCTGATCTGTGCAGTCACGGGGGACCCTGTGCTTAGGAGGACCCGCTCCTGGTTTCATTCTCTGCTGTCATCACCTTGAAATTCTTCACAATTCTCAACAAGGGGCCTCACCGTTTCATTTTGCACTCAGCCCACGAATTCTGCAGCGGGTCCTGACCTTGACTGCAGGAAGAGTCAGACCCACCTGTTCACATATCCACTCGTTCCCCCTGGTGCACACGCAAGCACACACACGCGCACACGCACACACCATGCAATGATCTGCATTGCCCCCCTCAGCTCCTTGACATCTG TCONS_00000008 TCONS_00000009 . 3' 3321 TCONS_00000008 TCONS_00000009 . 3' 7951 EMBV3_05971 GTACAACCATCCACTGACATCTGAATTTATTCCTGTAGGACTGACTGCACCGAAACACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38010 GCATGGGCTTCCGACGCCTATAGCCCTCAGAAATCTGACGGTGTGCCCATCCACCTGAAA Variant GeneID:540225|COX7A2L:NM_001034695:158_cdna 119^250 2 EMBV3_21230 GeneID:540225 11 GENE COX7A2L MGC127892 cytochrome c oxidase subunit VIIa polypeptide 2 like EMBV3_40029 GGACCTCTGCGATGGTCTAGAGAGTTTCTCTCTGTTGGCCAGCCAAGCAATTTTTGAAGT Gene GeneID:790833|LOC790833:XM_002684010:2_cdna Constitutive 0 NULL GeneID:790833 Un GENE LOC790833 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_35823 CAAAGACCAGGAGAGTGATGGGGGTTAGAAGATCGGAAGTGAGGCAAACTAAAGGATCTG Gene GeneID:506062|PMP2:NM_001075239:16_cdna UTR3_Alt 1 NULL GeneID:506062 14 GENE PMP2 MGC142428 peripheral myelin protein 2 EMBV3_11642 CTACTCTCGGGGAGCCGCGTCATTCATAAGGCATTACCTGGTTTGATTTTGCAGTTTGTG Gene BVV0102_115343 + 1 EMBV3_23839 GK000004.2:66851246-66858489 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184349 TCONS_00184350 1 XLOC_111326 Coding TCONS_00184349 XLOC_111326 Coding Coding WIPF3 4:66853804-66912940 j TSS137297 4059 1 TCONS_00184349_2 239 8 0.931495730109072 0.000107413427853212 1.71232651465757e-05 0.000143748613715811 0 3.03504952174458e-06 1.67602537920047e-05 8.62916515494186e-05 0.000141451581805121 0.000223674280713709 0 0 0 5.97939624557457e-06 5.44681092300861e-05 1.79475818332588e-06 0.000117300320331781 0 1.63658873359645e-05 1.04052167543362e-05 9.22309221830865e-05 3.44404356851705e-05 1.83719152637187e-06 3.84945351219876e-05 9.11037654747316e-05 1.87448365314783e-05 1.55308780133537e-05 2.745881116345e-05 0 3.75569912366757e-08 0 XM_002686848.3 WIPF3 PREDICTED: Bos taurus WAS/WASL interacting protein family, member 3 (WIPF3), mRNA. 0.0 6343 100.00 0.866223207686622 NM_001080529.2 WIPF3 Homo sapiens WAS/WASL interacting protein family, member 3 (WIPF3), 0.0 2334 75.95 0.800689825080069 0 coding 0 0 0 0 -0.0143066838818106 0.905165092730094 0.0129951567257159 0.818680022276188 CTCCCCCACCCCCACCGTCTGCACCGCCGGTAAGTGCAGATGCTTCCAGCTCGAGAAAGGCAGATCCCAAAGGTCGGAGTGCACTGTTGGCTGATATCCAGCAAGGGACTCGCCTCCGAAAAGTCACGCAGATCAATGACCGCAGTGCCCCGCAGATTGAGGGTTCTAAAGGAACCAACAAAGAAGGAGGAGGTCCTGCAAATTCTCGAGGGGGGAGCACACCTCCAGCCCTGGGAGATCTGTTTGCTGGTGGTTTTCCAGTTTTACGACCGGCAGGCCAGAGGGATGCAGCAGGTGGCAAGACCAGCCAGGGCCCTGGCTCCCGGGCGCCTTCTCCACGGCTTCCCACCAAGACTATCAGCGGCCCATTCAATCCCCCTGCGTCTCCCAGGCTAGGCAACGCCTCTGAGGGGCATGGCGCGGCCAGGGCGGTACCCCCTCGCCCCAGCGTGCCCGCCCCACCGCCTCCAACCCCGCCCCCACCGCCCCCGCCCCTACCGCCACCCCTGCCCCTGTCGTCCCCCGTCAAAGCTCCGCTGGTGTCCCCACCTGGCCCACCGTCTAAAGGGAGCCCGCCGGTGGTTCCACCGCCTCTGCTCTGCCCACCGCCTCCTCCTCCCCCGCCACCCCCGCCACTCCCGCCGCCCCCGGCCTTGGGTCCCAGTGACAAGGCAGCGAAGCCTCAGCTGGCCCCCTTGCACCTACCGCCCGTCCCGCCCCCGCTCCCTCTGCTCCCTCCCTGTGGGCACCCGGGGCTCAATGCGGAGGCTGCCAGCCCGGCCCAAGACGTGCGGGAACCTCCCGCCCCGCCGCCCCCGCCACCTCCACTCCCCCTTTACGCCTCCTGCACCCCCAGATCCTCTTTGCCTGCACCCACTTTGCCAAGTGCTAACAGCAGCAGTGAAGTCCCACCCCCGCTGCCCCCCAAGTCCCCCAGCTTCCAGGCCCAGCCACCCAAGCCCAGCGGGCAGGCCTTGCCAGCGCCGCCCGCCCCTCCAGGATCTCAGCCATTCCTGCAGAAGAAGAGGCCGGGCCGAGGCCCCGGGACCGGTGGGGGAAAACTCAACCCACCCCCAGCACCCCCTGCGAGGTCACCCACCACTGAGCTTTCCAGCAGGAGCCAGCAGGCCCTAGCCTGGACCCCAACCCAGCAGCCCGGAGGTCAGCTGCGGAATGGAAGCCTGAACATCATTGATGACTTTGAATCTAAATTCACATTCCATTCCATGGAAGATTTTCCTCCTCCGGATGAGTATAAACCATGCCAGAAGATTTACCCCAGCAAGATCCCCAGAAGCCGCACACCTGGTCCCTGGCTCCACGCCGAGGCAGGCGGGCAGAGCTCTGACGACATCAAAGGCAGAAACGCTCAGTTAGCGCTTAAGACGCTCCGGTGAGAAGACGGATGAAGCCAATGTCCTGTGAGCCACCTGGAGGTCCATATGGCAGGGTGGGCGTCCCCAGGAGAACGTCAGACCTCACTATTCTCAAGTCGTAATTCAGCTGACACACAGGCTCTTAATGGAGCGTTTATTTATTGTAAATACGTGTTTTGCACAGGCTTTAAATCAGTATTATAGTCAACTATTATTTGAATAATTTAAAACACACACACATTATTTCTCCATTTTTTAAAGTGCACCTTGGCACAGGTGACAGCCTTGTCCCACCGCACAGTGTCCATTCCATGACTGTAAATACGTCTGCAGGCTGGCCCTCCCTAGACTCGGAACTGTTTTTAGACGATCCCTTAGTTTCCCAAAGTCATAGTATCCACAACAGCTTCTTATTGGCATGATTTTTCTAGTCTCATCACACAAACTGCAAAATCAAACCAGGTAATGCCTTATGAATGACGCGGCTCCCCGAGAGTAGCGTGTCCCTCACCCAGATGCTGCCACATGGCCCCTCCTGCTCCCATCCTGCAGTACAAGGATTCTTTTGCTGCCTCATGTAAATATAACGCAGATCAAAGCCAAGAGTGGCCTCAGTCCCTCCAAGGCTGACCACAGGGCCCCTTGTGTAACTGAACAGTCCTGCAGGTAGCCAACGCTCTTACTGTTTACACTGCCCCTCGTGCCCACGTTTCTGCAATGGTCCTTCCTGTCCCGCTGAGCCCCCATCCTGGCAGCCAGGGTGAGGTGAGCTGAAGGAGATTTCAGTATGTTCCCTGCAAATTAGAAACCTACATAAGTCATCATTAATTCTGTCTCAGAAATGTTTTCTTTTTCCTCCCCTGAGTGCAGGGTTTATCATGGAAAGCATGACATGAAAAAGTATAGACTAAAACATATTCTGAAATACCTGCCTCAAATATCATGTCCCCCGCCCACGCTTAGGGAACCTGGATCCACCCATCAGGTAAACCTTAGCACCTTTCTGAGCTGGTCTGAGAGTCCCCCAGTCCCTGTGGTGGCACCCCTCTAGAGAGGAAAAGTATATGAGTTCAGCTAGCCCTGAATATGGATGGGTCAGGACTGGCTGTGACCTGTGGCTGCTCCTCTCATGCCCTTTTTCTGGGGCTGGCAAGGGAATGAAAGTGTGTTTTTGCTTGCTGCCTGACCTCATCCTTGGAGGAAAAGCTGTGACTGAGGAAGGAGAGAAAAATAGAAAAAAGCAGACTGACCCTTCATCTGTGCTCAAAATAGCTGCAGATTAAAGGAAATCCGGGAGAGGTGGAAAGAAAACAGTGAAAAATGTTTCCTCTGAAACAGCCCACTCATACCCTCACATCTTGAGGATGTAATGCCCAGAATACGCCATGTGCAGAAGGCAGACTGTTAGTGGGGTTTTGGCAAACATGTGACCGCATCCACCACCTCCTGTCTGGAATGGAGACTGACCCTGAGATGGTGTCCACCATCATTGTGTACTCTCTCATTCCAAACAGAAGCCACTGAGCAATGTCAAGTTCCCTCCCCTGGGGAATAAATCACGCCAAACTATTAACAGCTAAATCAGTGACAAAGAAGCTCTTGCAGGTCATCAGCTGTGCGTATAGCTGATCTGTCTTATTGGTTCTGCAAGCTTTCCAAAAGGTCAGAACTTTTTTTATATAACACTATCCACTCCACCTCTCTCCCAGTTGTACAAAATAATTACAAGGGTTTTTTAACAATCATGATTAAGAAGGCGCTAGACCAAAGCCGTTCCACCTTCGGAGTAGACTGCCTGCTCCGATGAGGTGTTTACATCCTGATGTTCTGCACCACTGGGATAGAAATTCAAAATAAAACTATTCAAGGTCAGAGGGAAGAAATGTGCAGAAACCAAAAATTGCAATTAGGGAAAAATCTCAGGAATCTGGCATCACATCTCTCCTCCAGACCCAGCACTGAATTCCTGCCCTTTGAACTCTTGCGGCAGGACAAATACTTCACCTCTGGACCACAAACTCAAACAGAGTGCCCCTCCCATCCTCGAGGAATCTCCCCAGCGCTGTGGTCTGTGACTCTCCCAGTGTTTCCCGTGTATTTTATATTTATTGATCTTCCCTCTGCAGATTCATTTCTTTGTATTAATAAACTTTAACAAGTGGGAATGCTTCCAGTTGTTTACTTGTTAAAGCTGATTGACGGTCGCCGGCACCAATCTAAGCCAACCATATTTAAGGATTAGAAGGGCTCAGACAGGATACTGACACAGGACCCAGCACTTGCTGTAACATTCTGGGTTAGAAATGGAGCCTTTCTTTTTGGAGGTAAACTATACCTAAACTAAACTACAGAATGTTTTCCTGATTTTTGTAGCTAATTAAACGAATAGGTGTTTGAGAAAACCAAGCAAGGGAAAAATTCAAATGTATTTTGTAACAAGTAGATAACACTATACTTATTCACTTTTATGAATATCAAACATGCTTACAAATTCTGCTAAATTGTGTTGAAATGGAGCAGCTTTCAACTTGAAGTGCACTTAGCACCACCCCCTCAGCTTAGCAAATGCCTTAAAAAATCTGTGTGGAGCAGTCTCATCGCCATCTCCATTATAGTGTCTCCCGGTGCCCTCTTTGGAACCTGGTACAGGGGACATAAGGTTTGCCTGATAGGTATGTTGGCT EMBV3_25576 CCGCTGATCTGAGGAGTCCGGTCTATCTGACTGTTTTGAAGCATGGTGATGGCACTACCT Gene GeneID:534122|NPEPPS:XM_002695921:292_cdna UTR3_Alt 2 NULL GeneID:534122 19 GENE NPEPPS NULL aminopeptidase puromycin sensitive EMBV3_15384 AGTGACTGTCTCAGAGGGGGCTCTCATGACCCTGAACTGCATTTACCAGACTGCTGATTC Gene GeneID:618552|LOC618552:XM_002707861:2_cdna Constitutive 0 NULL GeneID:618552 10 GENE LOC618552 NULL similar to LOC784904 protein EMBV3_32301 GGTCTGCCTTATCCGAGCTTGTTACTGGGGAGCCATAAGAGTGAGTTATCCAGAACACAG Gene GeneID:616641|TMEM55A:NM_001040594:88_cdna Constitutive 0 NULL GeneID:616641 14 GENE TMEM55A MGC128579 transmembrane protein 55A EMBV3_35175 CGGGGAGCAGATCGCTGGCTTCGTGAAGGAGTTCTCCCACATCGCATTCCTTACCATCAA Gene GeneID:518169|CTSA:NM_001035326:1117_cdna Constitutive 0 NULL GeneID:518169 13 GENE CTSA MGC128937 PPCA cathepsin A EMBV3_14218 GTTGAAGCCATGGCTGTAGAAGCCGGATGCAGAGGGCCAGCTGTCTACATTTTGCTAATA Gene GeneID:533020|CBR4:NM_001083717:2_cdna Constitutive 2 NULL GeneID:533020 8 GENE CBR4 MGC138958 carbonyl reductase 4 EMBV3_18268 CCCAGGGTGGTCGGGAAGATCCTGATTGAGAAGCTGTGCCTCTTCCAAGGGTTTAAGAAA Gene GeneID:523360|CARD14:XM_002696149:72_cdna Constitutive 0 NULL GeneID:523360 19 GENE CARD14 NULL caspase recruitment domain family, member 14 EMBV3_31865 TCCCCACCTCCCTGCAGATTCCTGCTGCTTCCACTGATACCCTTTTGACTGGAATGGACT Gene GeneID:506889|PCBP4:NM_001075283:94_cdna Constitutive 0 NULL GeneID:506889 22 GENE PCBP4 MGC140586 poly(rC) binding protein 4 EMBV3_29490 TCCTTGTCACTTCTGGGGACAGACACCGTTAAGATAGGCCTCAGCAGGGTCATAGCAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04384 TTTCTTGGGAAAAAAGCTAAAGACGCTGTTGGGTTTGGGCTTTGGGTTGGACTCCCAGGG Gene GeneID:509932|MRTO4:NM_001083399:117_cdna Constitutive 0 NULL GeneID:509932 2 GENE MRTO4 MGC142806 mRNA turnover 4 homolog (S. cerevisiae) EMBV3_21930 CTGTCTACAATCACAGGCTTCTACTCTAAGGAACGTATCAATGAGTGTGATGAGAAATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15213 ACAGTGCTGCTCAGTCAAGTACACAAAAGCACAAGCACGTGTAGAGGATGCACGCATGGG Gene BVV0102_085720 + 0 NULL GK000017.2:50378558-50734990 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080566 1 XLOC_049450 NonCoding TCONS_00080566 XLOC_049450 NonCoding NonCoding - 17:50395967-50397098 - TSS60506 1131 1 TCONS_00080566_3 120 0.190097259062776 1 0 0 0 0 0 0 0 0 0 0 3.6379257236752e-06 2.02403680295166e-06 0 0 0.00062803068389153 0.000147489491407977 2.33523972875287e-05 0 0 0 0 0 0 0 0 0 0 0 8.49263972605084e-06 0 2.12634810588162e-05 XR_232131.1 LOC100336044 PREDICTED: Bos taurus uncharacterized LOC100336044 (LOC100336044), 1e-26 125 80.13 0.135278514588859 0 noncoding 0 0 0 0 -0.00812782119526118 0.948804999749723 0.028815266304699 0.664251055167691 ATAATCTATCTACCTGATTTTTGTTGCAAAAACTCCTATCCTGTAAGTCCCATACATACGAACAAGTTAGCCTACGTACCCAACTAACACGATCAGACATACAGTACAGCACTGTAATAGGTTTATAATATTTTTTGCACAAATAATACATGAGAAACAAGCAACCAGAAAAAAATAAAGAAAGCATTTTTAATCTTACAGTACAGGATCTTGAAAATATAGTACCAGCTACAACACTGTTGGTTTTTTTAATGTATTTACTTTAATTGGAGGATAATTGCTTTGCAATACTGTGATGGTTTTTGCCATCAACACGAATCAGCTGCATTTATGCTTGCTTCTGGACATGTTGGGCTTGAAGTAAAGATACTGTACAATGTATCCTATACAGTGCTGCTCAGTCAAGTACACAAAAGCACAAGCACGTGTAGAGGATGCACGCATGGGACGATGTACGCCAGACACACGAGCTAACTTACGTGATTGGACGTGTAGAAGCCCGTCCTTGCCTTTGAAAGTTCACAACTTGAACTTTGCATGTAGCGGATCTTACTGTACATCCTGGCTCCTCTCTTACTTCTTAACAGCAGTCCCTCAGAGCTACTTCAGAAGCAGCCACAAAGCTTTGAAGTCCCCAGAAAGTCCACTGAATAAAACAGTATCCTCAATTTTTAGGGTGCTTATTTTTTTCATCAATAATGGACAGTTTGCTTCTATGATTCCAGGGAAGGGGAAATAAATGAATACAAATGTAAATAAATTAATTTAAAAAAATGTGACCTCTCAAGCACCTATTCCACAAACGGAGAGTCGAAAAGAGGGACTAGGAAAGACCCAACCTGGCAGGAACTGGCATACACAGATGGGGTGCCCGCTGACAAACTCCGAATCTTGGGGGTATTTCTCAGAAGACTCAGAAATTCAGAATTCAGCCAAGCCCTAGTATTTTCAAAGGGAAGTTCTTGGTGCACAAGCAATGCTTTCAGCATTATCATCTTACTATGGATGGAGTTTGTGTTCTTCCCACCATGTATACAGAGAAATCAAATCCTTGCCTCTAAGGGACCTTTTCTGAGCTGTCCGAGAAATTCTGTGTGCAAGCAGTGAGCTCACCAATAGAAATAACTTAAC TCONS_00077229 . 3' 496465 TCONS_00077229 . 3' 497595 EMBV3_04860 CCTTTGGAACTATTGGGAGAGGCTACACTGAAGTATTCGCTAACGTCCTTCATCTCTTGG Gene GeneID:615480|SLC35F5:NM_001101242:17_cdna UTR3_Alt 2 NULL GeneID:615480 2 GENE SLC35F5 NULL solute carrier family 35, member F5 EMBV3_11836 AAGCCTGGTGGGAGAGAAGTTGCCTTGGTGGTTGGTGCTGGTCATATTCCTTGGAAGTCT Gene BVT0102_059736 + 0 NULL GK000012.2:82916246-82952110 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035856 TCONS_00035852 TCONS_00035853 TCONS_00035857 TCONS_00035854 TCONS_00035849 TCONS_00037439 TCONS_00035855 TCONS_00035851 TCONS_00035850 2 XLOC_021010 XLOC_021385 Coding TCONS_00035857 XLOC_021010 NonCoding Coding LOC100298796 12:82934684-82972596 x TSS26212 747 1 TCONS_00035857_1 106 0.673360107095047 4 0.980401466592809 0.00448702861848669 0.000663552018117306 0.00457922581520013 0.000676701601209748 0.00200875540887908 1.55887871064532e-05 1.09433363491866e-06 0.000432378354111151 0.00287371385774069 0.000122922340533268 1.07159627308445e-64 1.10440141973606e-11 2.84409991601934e-21 6.68496362720327e-41 7.10537188939829e-190 0 0 0 0.00172431893978954 0.00150329428000037 0.000539563258395754 0 0 0 0.00275838679276535 0.00732036403204847 0.00407928113322836 0 4.36036255949258e-28 0 XM_003583439.2 LOC100847456 PREDICTED: Bos taurus biogenesis of lysosome-related organelles complex 1 subunit 3-like (LOC100847456), mRNA. 6e-15 86.0 73.47 0.186077643908969 0 noncoding 1 1 1 1 -0.172943969989454 0.168478156268522 0.0345209852320163 0.716354024725206 ATGCTACCTTTTGCCAGTAGAGGGCGCAGGCGGACAGGGTCTGCCTCCTGGTCCAGGTGCGCTGGCTCCACCGAGAGGACCTCCCAGGTTTGGCTCCTTCAGCACATGCGGCCTCCCCAGGCCCCAGCTCCTGCTGAGCTCAAAGCTCCTCTGCTGCGCTGTGCAAGGGACCCTGCAGTCAGCAGCACCAGGGGAAGCAGTGAACCCCCCTCTCCCCCAACGTCCTTGAACAGTTTTGTAGCTCAGTCCTTCCCCGGGAACACCTTTCCCTGGCAACACCTTTCCCTGGCACCCTCTAGGGCAGACTTCCAAGGAATATGACCAGCACCAACCACCAAGGCAACTTCTCTCCCACCAGGCTTGCTGGGGCCCTGCCTTCTCAACAAGATGTGGGTTTCAGCCCCATGGATGGAGGATATTAACTAGAGATCCCTGTGCTGTGCAGGAGGAGCTTGTTGCTCATGCGCTCTGTATACAACAGTTTGCATCTGCTCAGCCCAACCTCCTGACCCATCTGTGCCCCATGGCAACTGGAAGTCTGTTCTCTGTCTGATGCTTGCTCTGTGGCAGGGTGCTGGTCTTTGCCTTACATCAGCGTGAATCAGCCACAGGTCTACGTATGTCCCCCATCTCTTGAACGGCCCTCCCAGCTCCCACCCCAGACAGTCTTCTGAAACAGTTTACTCTAAATGCTGCATGGACCACCAGCTTGTTCCTTTTGATGGTTTGCCTCAGATGCAACACCAC TCONS_00035854 TCONS_00035854 TCONS_00037440 TCONS_00037442 s 5' 0 TCONS_00035854 TCONS_00035854 TCONS_00037440 TCONS_00037442 s 5' 0 EMBV3_27320 GTATCAGTCTTTAAATGAGGCAGGCAAACCACACATCCTGCCCACACCTACTTCCCTGGA Gene BVT0102_045495 - 1 EMBV3_00250 GK000003.2:48699218-48763974 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08658 AGTGTCCACCTTCTCACTGCCCCCACCTCCCCGCTCCGAGAGACCCTGGTACACCTCAAT Gene GeneID:540981|FBXL19:XM_002698100:141_cdna Constitutive 0 NULL GeneID:540981 25 GENE FBXL19 NULL F-box and leucine-rich repeat protein 19 EMBV3_00162 GTTCAACCAGCCGGCTCGCAAGATCCGTAGGCTGAAGAGCTTAAACTGGCCACTCAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39532 CCAACAGGAATGGTAGTTACACTGTCTTGCAATTTAATCTGTCCACTTGTTTGTAATCAC Gene GeneID:618009|ASAP2:XM_002691530:564_cdna Constitutive 2 NULL GeneID:618009 11 GENE ASAP2 DDEF2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 EMBV3_38300 CTCTAGTGAGGAAGTGGTCTAGTGGGGACCTTTCTCAGTGCACAGTCAGTCTCTCTAGCT Gene BVT0102_232262 + 0 NULL GK000007.2:5526392-5532595 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22571 GACAGGTATAAGATGCTTTGGGATGAGCAGAATACACATTAAATTCCAGCACGTAATACG Gene BVV0102_094636 + 0 NULL GK000001.2:120714945-121278992 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25346 ACATCCTGAGTGCCCCTTTGACCCCACGAAAATCTATGACACAGCCTTGGGTCTGTGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29079 GCATTAGCCAGTGGCCACTTGGTTTCCACTTACAAAGTCATATGACTCCTTCCTCATGGC Gene GeneID:519575|TTC13:XM_002698785:141_cdna Constitutive 0 NULL GeneID:519575 28 GENE TTC13 NULL tetratricopeptide repeat domain 13 EMBV3_15086 CTGACTAGGCATCATCACGGTTCCCCTTCAACATTCCTTCCCTGCCAAGGCCACTTCTAT Gene GeneID:508378|LGP2:NM_001015545:85_cdna Constitutive 0 NULL GeneID:508378 19 GENE LGP2 NULL RNA helicase LGP2 EMBV3_17407 AGGCACACAGACTTAGAGATCGAATTTATGGTTACAGGGGGAAGGGTGGGGACAAGAGAG Gene GeneID:781239|PLCXD3:NM_001103304:5_cdna UTR3_Alt 2 NULL GeneID:781239 20 GENE PLCXD3 MGC152172 phosphatidylinositol-specific phospholipase C, X domain containing 3 EMBV3_06987 TCATTCATTATGTAGCCTCTGGAAAACAGCACCTATTGTGTGAGAATGAGAGTGAAAGGG Gene BVV0102_029449 + 0 NULL GK000007.2:67321470-67331186 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25820 CTTCCGCCTCAAGCAGGGAGAGAGATTTGTTTTAACCTCCATCATCCAGCTCATGGCTTG Gene GeneID:507667|EMP2:NM_001075324:90_cdna Constitutive 0 NULL GeneID:507667 25 GENE EMP2 MGC137044 epithelial membrane protein 2 EMBV3_11780 TTCCAGAAAGATCTCTAGCTCCACATATGTTTCCACTTAATAGCAGAGCCCCGCCCCCAC Gene GeneID:768005|SLC9A3R2:NM_001077065:327_cdna Constitutive 1 NULL GeneID:768005 25 GENE SLC9A3R2 MGC133988 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 EMBV3_18367 GGCCGAGCGCGAGAACAGATACGACTGCCTGGGGTCGAAAAAATACAGCTACATGAACAT Gene GeneID:281366|ODF1:NM_174131:5_cdna Constitutive 0 NULL GeneID:281366 14 GENE ODF1 ODF outer dense fiber of sperm tails 1 EMBV3_19827 CAATGTGTATCATCTGAAGTGTTTTACATGCTCTACCTGCCGGAATCGCCTGGTCCCGGG Gene GeneID:614212|LMO4:NM_001034751:195_cdna UTR3_Alt 2 NULL GeneID:614212 3 GENE LMO4 MGC128977 LIM domain only 4 EMBV3_29134 TGTTGGCAGAGGTCAGAGAATCCACCTGCAGTTATGGGACACAGCTGGACAAGAGAGGTT Gene GeneID:505591|LOC505591:XM_002694820:694_cdna Constitutive 0 NULL GeneID:505591 18 GENE LOC505591 NULL similar to LOC618035 protein EMBV3_29077 CGGTTGCAGCTTTAATCCTCATGACATCCTCCATCATGTCCGTAGTGGGGTCTTTGTACC Gene GeneID:506318|VKORC1L1:XM_002698075:69_cdna Constitutive 0 NULL GeneID:506318 25 GENE VKORC1L1 NULL vitamin K epoxide reductase complex, subunit 1-like 1 EMBV3_04432 AAAGCCCTGGATTATAATTTAGAAGATGTCTGAGTATGGCTATATGAAGCATTGGTTCTG Gene BVT0102_043958 + 1 EMBV3_22918 GK000006.2:4743137-5339567 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202334 TCONS_00202335 TCONS_00202343 TCONS_00202350 TCONS_00202337 TCONS_00202342 TCONS_00202353 TCONS_00202340 TCONS_00202345 TCONS_00202351 TCONS_00202352 TCONS_00202348 TCONS_00202341 TCONS_00202347 TCONS_00202339 TCONS_00202338 TCONS_00202336 TCONS_00202349 TCONS_00202346 TCONS_00204336 TCONS_00202333 TCONS_00202354 2 XLOC_123950 XLOC_124412 Coding TCONS_00204336 XLOC_124412 NonCoding NonCoding - 6:4743337-4748476 - TSS152885 2186 3 TCONS_00204336_1 52 2 0.574931880108992 0.000555775991462019 0.00101501893785253 0.00060258022963956 0.000148030625872284 9.20392783867127e-05 5.81934536240384e-197 4.16495304310019e-13 7.97519413175317e-05 0.000656520136262721 5.19486034186127e-05 1.0166104170797e-44 1.79187675716147e-90 7.21908502343111e-67 0.000304902522241131 2.19693775409859e-45 0.00041032022736981 0 0.000164098731926144 0.000352137515665615 0.000357656951164665 2.32751755365126e-07 0 2.51797388776199e-05 7.1702853368949e-05 8.67295165301083e-05 0.0004088349037323 0.000585195424009454 1.7575467116883e-05 9.82157814523581e-14 2.75006733997706e-06 XM_005207569.1 PRDM5 PREDICTED: Bos taurus PR domain containing 5 (PRDM5), transcript 0.0 3837 100.00 0.972552607502287 XM_005262706.1 PRDM5 PREDICTED: Homo sapiens PR domain containing 5 (PRDM5), transcript 0.0 1153 72.33 0.938700823421775 0 noncoding 0 0 1 0 -1.02153560431891 0.0282128590239699 -0.0132411475467264 0.843672896185314 AGAGCACAAGGAGTGGATTCCACATGCAAGGAGTCGGAGAGGCTGAAGCGATGCCGAATGTCTTGACCTCAGGGTAAGAGTTTGACCTCTTCCCACAAACGTATGGGAGCTGTAACCTTCTGCAGCCTAAGAGGAAGATTCTTTAAAGTGAGTACCTGCACTCCAGCATGCCTGATCTTTTCCTCTATGACTGTCTTATTTCTGTTCTTAATTTCTCAATCAAACGAAATGAATTCTTATCTCTTTGTTATTGCTAAGTGATTTTAAAGTTCTAAGACACAAACTCTAAGATATCTGAAATGTTTTATAAATAATCGTCTTTCAGATAAAAGGTGATAGCACGGAAATGATTTTTTAAGGGTCTGTTTTGGTTTCAGTGCTTTGAAAATAAAGGATGGTGTACCAGCAGGTCTCTGAACGCCATTTTCTGAAGTCTTTTTTGACTGCAAACCTTGGGCCAGATCACATCCAGCACTTCAATCGTCATCAGTCCTCTCCACAGCATGTTGATAACATGCTTTCCAGGGTAACTTCCTCAGCAGCCCTGTAAATTGTGAGTCATCGAGATGATACACAGTTGGTCTGGCTTCAAGTTTCACACAATTGGCTATGAAGCATCCCATACAGAGAAGGCAGCACCCAAAGGAATGAGCAGAACATGTTTAAATAATACCATCTACTAAATTTTACAGCTGTCCTTTTATATTCAAATGAGATTAAGCACACTGTTATGTTAAAATGAAAACACTTTAGATCTAAAAATATACGACTGAAACAAATGACATAGCAAGAAACAAGACCAAAATCTATTTGTATAAAATATAGTCTATAATTTCAGAACCAATGCTTCATATAGCCATACTCAGACATCTTCTAAATTATAATCCAGGGCTTTATATTTTTAAAAATTATCTCTGGTGAATTTCAAATTTAGTATTTTTCACAGAGTTTAAATATCTATAATGAATCGTTGCTTCTTTTTAGAACTGGAACTGAGCATAAATATAATTCTAAAACAAGATTCCTGATTTCAGAGAATTTTGTCTTCAGATAACCTTTCTCCACAAATGATTAGAATTAAATAACTTCCTTAAAATTATACTTTCTCTCTTTTGAATGGGTTCCAAATAGAAAAGTTCTTGAATTGGGATTCATTTTAAGTTTTTGCTGGTTGGGATTTTTCTACGCTACTTTAACAACATTATTACATTTTATCATATCTTCTCCCAAGACAAGCTGTTCATTGTACGTTGTTTTCAAGTCCTGAACCGAAATATAACCTAAAGGAAGAAATTATGCTTCTTGCTTCAATTTCCCTTAAACATTGGCGATCATTTCGTCATAACAACTGCCAGGGTTGTGTTTTTTATTCTGGATTCCTAATTATAAAGGATTAAGAGTAATTCAAAAGTGTTTCAGAATCACCTACTGCCAAGATTCTGGAAAATGTCTCTTGAGAAACAGGATGTAGATGCTTTGAGGACTGCTGCATCTGCACGGACAGGCCCTGTGCTCCCCGATGCAACGAGAGGGTGAAGGGCCAGGTCAGCACCCTGATGCACCTGCCGTCCTGCTGCTCCGTCAGTCAGCAGATACTGAGAGCCCATTTGGTTTCCACGGTTAGTCATCTGTTGTTAATTTCTAAAGGTAGCTAGTAGAAACTCAGGAGAATCACCTGGACAAATTTAAGTGTTATGGCCACTTCTGTGTTGATATAAGTATTCTAGCCATGCATGCTGGCAACTGAATGATGAGGAGATGTTTCCTGAGGATTGTCTAAAATAAGGAAAATTTCAGTAGATGTTTTAGTTCTTAAACACCTTTTTAAACTCATCTGTTGTAAGGAGCTATGAAGGACCATCAACTTTTGGCCTGTTTCACAAACAGCGAGTTTTATACTGTTACTGCACTTGAGACTTGGGAAACTCTTGCCTCTCATCCTTATCTGTAATGATATCTTGGAAATCTTAATTCCTTTCCTGTTAAATTAGTAATAACCAATTGTGATAACTAGCACGTACACACACACACATAAGGATAAAAATAAAATTAAAAAGCCTGACAAAGAGTATGTTAATAAACCTCACTACAGAGAGATTGGCCAAGAAGAAGATGACATGGCTCCTTTTCCATTTTTATATGACATAACAAAAGTAGTATTTTGGAAGGTTATAAAGTTATTTTTT TCONS_00202354 r 5' 0 TCONS_00202354 r 5' 0 EMBV3_13565 AGGAGAACTGGGTGTGTCTGTCTTGCTATCAGGTCTACTGCGGTCGTTACATCAACGCTC Gene GeneID:513602|HDAC6:NM_001098960:60_cdna Constitutive 0 NULL GeneID:513602 X GENE HDAC6 MGC157092 histone deacetylase 6 EMBV3_19965 CCTCCTGCTACTGATCTCTACTTTCACTCCATTCTGACTGGTAAAGGTACTTGGTATGAT Gene BVV0102_412506 - 1 EMBV3_14429 GK000024.2:39739324-40229541 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34219 CAAAGTCACACAGCTGATTAGTGGCAGAGCTGGAACTTGAACCTCAGCGTTGGCTCCATT Gene BVV0101_018971 + 0 NULL GK000002.2:129193522-129315263 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04609 TTAGCCATTTCCACAGACTCTGGCCTCCTCTCTAACTTTTTGGATGGAGGAAAGGGGAGG Gene BVT0102_173892 + 0 NULL GK000002.2:105367087-105378989 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06459 AATCAGACGCCTGGAAAGCAGACCCGCGGTCAACGCCAGAGGCCTTACAGACAGTTTCCA Gene GeneID:100295902|LOC100295902:XM_002696649:230_cdna Constitutive 0 NULL GeneID:100295902 21 GENE LOC100295902 NULL hypothetical protein LOC100295902 EMBV3_21020 AGAAGGAAGCTCTCTCGGTGGCTGTGATGCCTGTTTGAGGGGATACTTGGAGGTGTCTCA Gene BVV0101_043154 + 0 NULL GK000007.2:74663088-75043588 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217729 TCONS_00217736 TCONS_00217745 TCONS_00217739 TCONS_00217730 TCONS_00217746 TCONS_00217737 TCONS_00217744 TCONS_00217738 TCONS_00217747 TCONS_00217740 TCONS_00217731 TCONS_00217741 1 XLOC_131567 Coding TCONS_00217737 XLOC_131567 Coding Coding - 7:74421464-74723956 - TSS162073 1079 1 TCONS_00217737_4 254 7 0.996456092908549 0.000948301956746504 0.00272644775194139 0.00268921011409103 1.55369932917846e-07 0.000437908492613015 0.000449180072145785 0.000885969297103138 0.000768511611533299 0.00063382356630737 6.87339700016453e-28 4.73130292671486e-05 0.000323672078283354 0.00103801651657456 0.00115721570305064 8.22465890026319e-104 0 0 0 0.000961607638348237 0.0021594356631885 0.000123137932845853 0 0 0 0.00168230893037961 0.00169905683730159 0.000548524859363772 2.28221727172173e-12 4.4991713046427e-06 2.30867054891379e-09 XM_005198757.1 ATP10B PREDICTED: Bos taurus ATPase, class V, type 10B (ATP10B), 0.0 1413 99.87 0.727525486561631 NM_025153.2 ATP10B Homo sapiens ATPase, class V, type 10B (ATP10B), mRNA. 0.0 892 86.03 0.708063021316033 TCONS_00217737_4 sp|O94823|AT10B_HUMAN AT10B_HUMAN Probable phospholipid-transporting ATPase VB; 6e-153 466 83.86 0.996062992125984 1 coding 0 1 1 1 0.612092451293187 0.33624425245015 0.0177986309433667 0.747071545277365 GGAGGAAATGGGGTGGAGGAATTGTGTTCAGGTGTGCGCCGCCACCGAAGGCCAGGCTTCAGAAGGGGTTGAGGCTGCCTGCCCAGCCAGGGAGGAGAAGGAAGCTCTCTCGGTGGCTGTGATGCCTGTTTGAGGGGATACTTGGAGGTGTCTCAGCCCAGTCTCCCTCCCCAGAAGAGGAAACCAAGAAGGGCCCAAGGCATGCCAGCTCCCAGAGAGGAGAAATTGACACAAATTATTTAAAAGAAGAAAAGCAACACCATTACCATAGTTGACTTCCTGTGTTTGATCGGAGCTTGCTATGAGACATGGCCCTCTCAGTGGACTCGTCTTGGCACCGGTGGCAGAGGCGAGTCAGAGACGGCTGCCCCCAGTCTCCGTCGGAAGCCACGCCGCTGCTGCTCGCAGAGAAGGAGACGCGGAACTACAATCCCGCGCAGCAGCGGGTCGTGTTCCCCAACAATCACGCGTTCCACCAGGACTGGGCAAAGTTCTCCAGGCGATACCCCAGCAACAGAATCTGCACAACCAAGTACACCCTCTTCACCTTCCTGCCCCGGAATCTCCTAGAGCAGTTTCACAGATGGGCTAACCTCTATTTCCTGTTCCTGGTGATTCTGAACTGGATTCCCACCTTGGAAGTCTTCCACAGGGAAATCACCATGTTACCATTGGCCATTGTCCTGTTCATCATCATGGTCAAAGATGGCATGGAGGACTTTAGGAGATACCGCTTTGATAGACAGATTAACTGCTCCAACATCCAGATATACGAACGGAAAGAGCAGAGCTACGTGCAGAAGTGCTGGAAGGATGTACATGTGGGGGACTTCATCCAGATGCAGTGCAACGAGATCATCCCAGCCGATATACTCCTCCTCTTCTCCTCGGACCCCAGTGGGGTCTGCCATCTGGAAACTGCCAACTTGGATGGAGAGACCAACCTCAAACAGAGGCGGGTTGTGAAGGGCTTCTCACAGCAGGAGGTCCAGTTCCAACCAGAACATTTCCACAACACCATCGTGTGTGAGAAGCCCAACAACCACCTCAACAAATTTAAAGGTTATATGTAAGGGAAC TCONS_00217731 TCONS_00217731 TCONS_00217731 TCONS_00217731 TCONS_00217731 TCONS_00217731 TCONS_00217731 s 5' 0 TCONS_00217731 TCONS_00217731 TCONS_00217731 TCONS_00217731 TCONS_00217731 TCONS_00217731 TCONS_00217731 s 5' 0 EMBV3_27182 AGAAACCACTGAGATGGGTCCCCTTCCCCCAATGCCACATACCACAAGGACAGGGCTCAT Gene GeneID:516122|CERCAM:NM_001102035:106_cdna Constitutive 0 NULL GeneID:516122 11 GENE CERCAM CEECAM1 MGC166428 cerebral endothelial cell adhesion molecule EMBV3_25551 GTGGAAGAAGACAGCATAGAGGAGGTGGAAGTGGTGGAAGATGTGGAGCAGGAGCAGTTA Gene GeneID:100295592|LOC100295592:XM_002699924:55_cdna Constitutive 0 NULL GeneID:100295592 X GENE LOC100295592 NULL hypothetical protein LOC100295592 EMBV3_33893 ATGAAGGCTCTCCTTATTCTGGGGCTTCTGCTCCTTTCTGTTGCTGTCCAGGGCAAGACA Gene GeneID:781146|LOC781146:NM_001080336:58_cdna Constitutive 0 NULL GeneID:781146 5 GENE LOC781146 NULL lysozyme EMBV3_06981 AACTTCTTCCTGCCGCAAGGACACCTGGCTCCGTTCTGTCCTCTTAAGGTGATCTTGTGA Gene GeneID:615886|MRGPRF:NM_001035470:16_cdna Constitutive 0 NULL GeneID:615886 29 GENE MRGPRF MGC140049 MAS-related GPR, member F EMBV3_02359 CGGACCCGGCACCCCACCTGCATGACGATTTATTTGTATCTGGGAAAATACTCTCTCTAG Gene GeneID:616756|SIX3:XM_002691302:412_cdna Constitutive 2 NULL GeneID:616756 11 GENE SIX3 NULL SIX homeobox 3 EMBV3_34079 CTGCTCACAGCTGCCCAGCTGAAAGCCAAGGTATGGCCGCTGCTCAATGGAGAGCTACCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08871 GCTATAACTGACATTAAATTCTAGATGTTGAGACTCGCTGAATCAGAAGGCGCAAAGGAA Gene GeneID:509355|SYAP1:NM_001034348:6_cdna Constitutive 3 NULL GeneID:509355 X GENE SYAP1 MGC127250 synapse associated protein 1, SAP47 homolog (Drosophila) EMBV3_41897 TCAATAGTACCGTCCCCAGTGCTTTCCCGTTCCATTATGAGGAGGCTTTGAGAGAAGAGG Gene GeneID:788399|LOC788399:XM_002700251:31_cdna Constitutive 0 NULL GeneID:788399 X GENE LOC788399 NULL similar to melanoma antigen family B, 2 EMBV3_41038 AGGAACAGGTAGCATTCAAGGACGCCTCTGTGGACTTCACCAAGAAAGAGTGGGGTTGCT Gene BVT0102_136131 + 1 EMBV3_13573 GK000028.2:46030709-46051868 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159860 TCONS_00159859 TCONS_00159864 TCONS_00159858 TCONS_00159863 TCONS_00159866 1 XLOC_097523 Coding TCONS_00159860 XLOC_097523 Coding Coding LOC100848535 28:46041375-46055913 j TSS119707 4583 1 TCONS_00159860_4 404 0.179358498799913 5 0.685079452431726 0.000219723928601952 0.000300376662200672 0.000235849036038652 8.05035528470597e-05 0.000637405320431858 6.80318297383857e-16 0.000365423236862245 8.2004419357351e-05 0.000902915265047564 8.69089725375679e-05 8.2196697595549e-13 3.16985411863525e-13 6.96373346531865e-05 0.000224153637311277 1.33786353511636e-15 7.97016506275654e-06 3.24007202592335e-50 6.75054090668699e-10 0.000283087247315968 9.27517101478542e-05 9.06478720818986e-19 9.70072461371819e-10 2.34501079802907e-12 0.000383757642578441 0.000122223032239574 0.000455509935667513 5.19450482232569e-12 2.37751388841986e-15 0.000129969475927254 2.56773316297379e-22 XM_005226640.1 ZNF239 PREDICTED: Bos taurus zinc finger protein 239 (ZNF239), mRNA. 0.0 7362 99.93 0.893301331005891 NM_005674.2 ZNF239 Homo sapiens zinc finger protein 239 (ZNF239), transcript variant 0.0 1613 79.65 0.401047348898102 TCONS_00159860_4 sp|Q16600|ZN239_HUMAN ZN239_HUMAN Zinc finger protein 239; 0.0 645 79.26 0.995049504950495 7 coding 1 0 1 1 0.0593493760429029 0.764244714819038 -0.00689745932050798 0.893805127601854 ATCACGAGTCCTGCGCTTCCAGGTATCAGATTCCACGTGAGAGGCGAGAAAGGCCTGGCAAGCAGCGCAGCCTGCGCAGCCGGTGGAGAGGCGTCTGGCGTTTGAGTCGTGGGAGTGTCGCCGGGAATCTGTCCTTCCTGAAAGGAGAAAATGACCAAGTTCCAGGAACAGGTAGCATTCAAGGACGCCTCTGTGGACTTCACCAAGAAAGAGTGGGGTTGCTGGACTCTATTGAGAGGAAACTGCACAGAGCTGTGATGCTGGAGAACTACAGCCACTTGGTCTCAGTGGTCCTATGTTCGCAGCATGATCCTGGAGTGCACCACCCTACTGATGCTCAGCCCTTTCCTGGTGCACGTGTGTTCAGCTCTCAGGGGACACCTCTGCTGACTGGGCTTGGCATGAATCTAGTAAGAATCCAGATGGAGACTTGAATGAAAATTTTGTGGAAAATGAAGATAAAGTACTTATGTTATCTATTACCTCTAGAGCCTTCCTGCTGGCAAATTTTGGAAGAGGTGGCTTAGTACAGTAACGAGGAGTCAGAATTAAATTGTGAATATTCACAGGGAGGTGTAAGTAACCCTGAACTGGATCTTTCTACTTGTCAGAAGTGGAGAAAAGTATCTTCTAATATTTCCAGGAACCACAAGCAGTGTGGTGACTCTTCAGAGTGATGATTTAGAAAAACATGGAGAGTGAAGACTATCCATCTTTGAAAGTCCCAATCCAGATGGCCACCCAGGACTCCTCATTCTGTAAGAAAGAGCCCCAGGATCCTCAGGAAAGCAAAAGTCTGTTTGTACCTGAAGAAAGCACTGAGAGGAAACTGACAGGGGCAAAAAGTCCTCCCATCGAGCATTGTTCAGAGAACCTTCAAGATAAACTTGTGGCTGATGTAAAAGAAGTAGTCTTGCCATTGCTCAAAGGGGAGACAGTCTGCCATACTGGCCAGTTGAAAGAATCCTTGGAGCCCTTTGACTATAACCACAAAGACGTTTGTGGTTGGAAATCTCGGGTGGCCAGTCATCATTATCAGAGAGCTCATACAGAGGAGAAGCCCTGTAGCCATCAAGACTGTGGGAAAACATGTACCGCCAGCCCAGGTGGTCACCCTGGTGAGAAAATCCGCCCTTCACAGAAAGTATTCAAATGTAGTCAGTGTGGCAGGGACTTCAGGGAGCGCTCAGATCTAGTCCTTCATCAGAGGGACCACACTGAAGAAAAGCCCTACAGATGTGATCAGTGTGGGAAGGGCTTCACAAGGAGCTCAAGTCTCCTCATCCACCGTGAAGTCCACGCAGATGAGAAGCCTTATAAGTGCGATAAGTGTGGAAAGGGCTTCACCAGGAGTTCAAGTCTGCTCATTCATCACTCAGTCCACACAGGTGAGAAGCCTTATAAATGCGACAAGTGCGGGAAGGGCTTTACTCAGAGCTCCAAACTGCACATCCACCAGCGAGTGCACACTGGCGAGAAGCCCTACGAGTGTGGGGAGTGCGGCATGAGCTTCAGTCAGCGCTCCAACCTGCACATCCACCAGCGCATCCACACAGGGGAGAGGCCCTACAAGTGTGGGGAGTGCGGAAAGGGCTTCAGTCAGAGCTCAAACCTTCACATCCACCGCTGTTCACACACAGGGGAGAAGCCTTACCAGTGCTACGACTGCGGGAAGGGCTTCAGCCAGAGCTCAGACCTCCGCATCCACCTGAGAGTCCACACTGGGGAGAAGCCCTATCACTGTGGCAAGTGTGGGAAGGGCTTCAGCCAGAGCTCCAAACTCCTCATCCACCAGAGAGTCCACACTGGAGAGAAGCCCTACGAGTGCAACAAATGTGGGAAGGGCTTCAGCCAGAGCTCCAACCTCCACATCCACCAGCGGGTCCACAGGAAAGATCCCCATTAAATGAGGTCTTCAATCACATGCTCTTACTTCAAAGACTTCAGTATTTCTAACATCACTCTTACTTTCACAGTCTCAGGATATAGTAAGAGTTATTCAGATATGTTCCCTCACTGAAAGTCATTCACTCAAGGTATTTAAGTACCAAGCACTTTGTTATGCTACACAGTGAATTGATTGTTCTTGTTGCTTAGATAGGCAGAGCGAAAACGTCTGTACTTTGTCATTCACCCAGTGTTACTAGAGCTACATATCCTACCCAGCATTTCTAAGTGCAAGAAGCTTATATTTGTCTAAGCAGAACACGTTGACTTTGTTCACACTCGCTGAGAATCTGGGACTTTGGCTTTCTCTTCAAATCGTGTGCCTTGTGTTTTTCATATTTCCTTCCAGTCCTGAGTAGCCCTCTTTAAACTATGATTGCACAATATGTTTTAATATTTGCTATAACCCCCAAAAGTCATTTGCTTTGACAACATTGTTACTGAGCCACACTTGGGTCTTCTTGGCCAAGCAGAGTAAAGCCAATCTACTGACACTGGGTTGTAAAGGAAGTGCACCATTTATTGCAGGGCACCAAAGGAGTCCAAGAAGCTGGTGCTCATCAGACCCAAACTGATGGCTTTCAGAGAAACATAAGGTGAGGAACAGGGGACTGTGGGGTGCATGATCAGCTCATGGACATTCTTCTCATTGGTTGATGGTGAGGCAATTAAGAGTCAATATCATCAATCTTCTGTTTCTAACCCATCTGGGGTCTGCTTGCTTATGGGCAGCAAACAACTTCTTGCATCTGGTGGCAGTTTCAGTGTCTGCAAAACAGCTCAAAGGACATGGCTCAGAATATTATCTATATTCTAGAGGAATTACAGGTCCTTGCTTCACTTAATGGCTAAACGATTATTGTTTGTTTTGCTTGGCTTTTTCCCTTTCTTTCTGTATTTTCTCTCTTCTCTGATTAAATTTACGCTTTGGAACTTGAGGAAGGCTTGGAGAGTATGTTTTGAGACGACAAGGCTTAAAATATGCACTCTATCATACATAATTCAATTGGGGTGTGGAGCTAGGATACCTCAGAGGGTTAAGGATCATCTCCTAGAAGGTAAAACAATAAGCTTGTAAAATAGTTGAGAGAAAATTGTTTTTTAGTGAATACATAAGTAAAGCAGAAGTTAACTATACAATGGCCTAATTGCAACCCTGATTTTCTAAACAGTGATTCCCCAAGTGAGGCTTAAGAGGCTCCCTAGTCACCTATAGTTTAGCTACTCACCAGTGACTAGAATCTGTACATGAAAAAACGGTGGGGGATATAGATGCAGTATTTATTACCTTGAGGAGCTGGGGTTATAACTGGTACATCCTGATCAAAGTTAACCTGAAACAGTTAACTGGACATGGATAACAGGAAAGTGACATGTTAAATTTAGAGGAAATGTAGCTAATGTCTAATAAGAAATGGAGGACTTGCTTTCCTTCAAGAGGCAATCCCAGAATATTTGACTCCAACTCAAAGGAGCCCACATAGAATGATTAGGGTAGTGACTGAGCATCTGTGCTTTGGCATTGCATAATACCCTCACTAGTTTGGATACCCTAAGATGGTATCACAACTGATGTGATTCTGCTTTGGTGAGTGCTAGAATTATGAACCCTCCCAGTTCCTCCTGGCCTCATAAGATTATATGTGAACATCTCTTCTGGATTTGACTCTTATTTGTCACATGTGTCTTCTAATTGGCTGATATATATACTCTGTTTGGGACTTAGAGCCAAATATGATCATAAGAATCCATGTGTAGTGAGTCCCGAGAGTAGATCTATGAGTCCAGAGAGCAGATCTAAAGTCCAAGTCTCAAATGATTATAAACTAGCCTGTTTTCCAAGTCTCCTTTTATACATACATTAATTTAGCAATGTTTTTAACTCTGTTTAGCTTTTATTGTTCTCTTTTAAGCATTAGCTTTCTTAAAAAATTGAAATGTGGTCAGAGTCCTTGGGAAGCATTTTGCTGATTGTGGTAAGGAAGTTTGGAGGGAAAGTCAGAAAAAGGAACTTGTGCATGAAAATGCAGGAAAAGGAGCCTTCCTGATGGCTCAGTGATAGAGAATCCACCTGCCAATGCAGGAGACATAAATTCAATCCCTGATCTGAAAATATCCCACATGGCTTGAACCAACTAAGCCTGTGCTCTAGAGCCCAGGAGCCCCAGCTACTGAGCCCACAACTGCTGAAGCCTGCATGCCCTATTGCCTGTGTTCTGCAACAAGAGAAGCCACAGCAAATGAGGAACCTTCGAACTGCAACCAAAGAGTAGCCTCTACTCACTGCAACTAGAGAAAAGCCCACACAGCAATGAAGACCCAGCACAGCCAAAAGTAAAGAAAATTATTTTAAAAAGAAAATGCAGGAAGAACAGGGCATGTCTCACATTTCATGAAGTCCTAAAGATGCCATAGATTGACAAAGAGAAAACACTTCGTTAATTTTTTAAGACATCTCAACTTCAGACATGTGAAAATGAAAAAAAAAAAAAAAAAACGTGTTGCAAAATGGTTCTTTTTCAGAATTCAAGGGTTGTCCTAAGATTGGTCCTTTACTGGTACCTGAACAAAGACCTTTGGAAAATCTCAATAATTGTATTTGATTGATAATTCCATCACAAATTTGGCAAAGAATC EMBV3_21400 GATGCTTCCTCTCCGGAATTCAAGTTATCTTTTCACAGGCCTCCCACCTCTACCATCCCT Gene BVT0102_079856 - 1 EMBV3_23640 GK000010.2:24802962-24832964 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04598 AGGTTCTGCACCACGAGTTACTGGCCATCCGTGAGGCGTGCATTAAGCTAGAGAAGGACT Gene GeneID:404130|EIF2C2:NM_205794:26_cdna Constitutive 0 NULL GeneID:404130 14 GENE EIF2C2 AGO2 eukaryotic translation initiation factor 2C, 2 EMBV3_09687 ATATTCTGGGCTGTAGGGGCCATGTTTCTGGGCCGTGGCTAAACTGGGACATTTGCAGTT Gene GeneID:617307|SLC19A1:NM_001076453:84_cdna Constitutive 0 NULL GeneID:617307 1 GENE SLC19A1 MGC140809 solute carrier family 19 (folate transporter), member 1 EMBV3_07657 CGGGCGGTGGCTGTGACTTGTTCACGTTAAAACAAATGATACCTGGGCCACAGTCCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28206 CCATGTCATCAAAATTTTAAGTAATGTGCATTGACAATAAGCTTGATCATGGGCATATGC Gene GeneID:512761|CRLS1:NM_001098951:1012_cdna Constitutive 3 NULL GeneID:512761 13 GENE CRLS1 MGC143123 cardiolipin synthase 1 EMBV3_37640 TCAGCTCTGGGGAGACCTGGGAATCGGTTTGTCTGTTGTTGCACATTCCAGGATATCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26694 CTACTACCGGGCCTCCATCCCTGTGGTCGCCTACTATGAGACAAAAACACAGCTACATAA Gene GeneID:613448|AK5:NM_001083757:89_cdna UTR3_Alt 2 NULL GeneID:613448 3 GENE AK5 MGC139240 adenylate kinase 5 EMBV3_43647 GATAGTCACGAGAAAGCTGCACAGCATCAAATGGGCACATGTTGGATTCAACAAGATATG Variant GeneID:618021|LCMT1:NM_001076488:13_cdna 475^537 1 EMBV3_40593 GeneID:618021 25 GENE LCMT1 NULL leucine carboxyl methyltransferase 1 EMBV3_04668 GGCTGGCAACCCTCGATATTCCAACCCAAGTCATAGGAGGTGGAGAAGTAGACTAAGAAG Gene BVV0101_050405 + 0 NULL GK000017.2:58255078-58405436 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077602 1 XLOC_047098 Coding TCONS_00077602 XLOC_047098 NonCoding Coding LOC100848486 17:58258983-58294885 j TSS57946 3141 6 TCONS_00077602_2 71 0.205030245144858 3 0.91259296398429 0.000897748035536252 0.000446251995961954 0.000660001769317768 0.000445767917846636 0.000146561396000693 0.000291594402406065 0.000680638786460883 0.000220400889341213 0.000680921376776301 0.000402181690513095 0.000405944867365022 0.000129776643851916 0.000335991006340651 0.000374145278931649 3.71746044050023e-05 0 1.29947228935833e-25 0 0.000287784927913854 0.000791257673067881 0.000504536190368116 0 0 1.66087009877623e-16 0.000264147945531972 0.00026586251378526 0.000996143358254411 0.000221580699946107 1.96527624320045e-05 6.67930490425512e-06 XM_865397.6 CCDC60 PREDICTED: Bos taurus coiled-coil domain containing 60 (CCDC60), 9e-128 462 100.00 0.0811843361986628 NM_178499.3 CCDC60 Homo sapiens coiled-coil domain containing 60 (CCDC60), mRNA. 1e-17 96.9 75.61 0.0503024514485833 0 noncoding 0 0 0 0 -0.709230252629881 0.0580554345635332 0.00738421888085922 0.93181870381125 GGGACTGCCGGTTAGCGGCGGTGGCTTTCCCTCCCTCTCGGCTGGCCGCTGCAATCCTAGGATGGATTTCCGGGGGCCCCTCCATGGGCCCCCCTCAGACTTTTTCAGCGGAGTTTTATTTTTTTAGTTTCATATTTTATTTTTGTTTCTAGAAGACAAAGCTGTCCCCGTCCCAAACGTGGAAAAACATAAAAGTTTGTGACTTTCTAAAAATTAATTCCTCCCCAGTCAGAAACCTGTCTGGAGTCTCATTAGGACCTGTGAGTCAGGGAGAAATTGCTGGAAAGCCCTTGACACCAGTGACTGCTGATGTAGAAGATTCTGGGGGAGAAAACAAAACAAAACCTTCCCTGCTGGACACAGTTTAGCCTGAAGGATTTCCAAGATGACCAAAATCACCAAGAAGATGCAGAGTGCCCCTGCCTCCGGGGCCCTCTTTCCCTTTTTTGCCTCAGCTCTCCTAACACAGAACTCCAGGGCTGGCCCAAACCTGCATGGTGCGAAGCTGACTTGCCGGAGGAAGAAGGCAGATGCTTCAGAGGGAGGTTAAGGTGTCGGTTGGACACGCAGGCTCTGGAATTCCAAAAGCCACACATTCTAGTCTTGCCTCTGCCACTAAACCATGGTGAGAGTTAAAATCTTAGGGGCCTCCTCGAGTGGATAATAATGCCGGCCACTGGATTATTATCAAGCCTGGATAAATTAAAATAGTAAATATAATGTATTGTGCCAGTCCTCCATGGCAGCTGTAAAGAAACTACCCTAGGAGGTTTGGTGCTATGCTTATACCCATTTTATTGATGAGAAACCTGAGACACACAGAGGTTAACCAACTTGCCCAACTGCAGAGGTAGTAAGTGGTAGAACTAGGAAAGGAAACACTGAACAATAAACATGCGGATCATTACAATTGCAAAGGAAAGGGTGTGAGAAGAAATGCCACGAAGGGATCTGGGGTTTGGGGGCAATACCTCTTAGGAATGGGTCCATTCCGACAAAAGTTTTTGTCCCGGTGACATGCTGATAAATGTCTAACAGCTCTGCGGGGAAAACAAAACCAAACCAACCATCCAAGTTTGTAGTGTTCACCAGTTTCTGTGGTGTAAACACTGCTCCCACCGTGGCCAGTTTCAAGCTACCAGTTTCAAGCGACTTCGCCGAGCACAGAGCGAGGAAGGAAATCTACGCGGTCAGCCCCCACACCATCGCTGTCTCCTCTCTTTTGTCCCCACCTGACTTCTGATCATCTCCCTTGAAACCACCCTTCAGCTGCCTCTTCTGGGCCACGTCCCTCCACCTGTGCTACTGAACCCTCACAGAATGTGCTGGTGCAAATGATGTGTATCCGTGGGGCCCCGCCTTACCTCCCCAGAGGCAAGCTTTTGATTGTGATCAGACCAGTCAAAGTGATGGGGTGTGGGGTCAGGGAGCAATGTCCTTCCTTGAGCTCAGTGGTCCCTGCACACAGCAAAGACAGTTTTCAGCCAAATGGACAGCAGTGGAGCCGTGGAGAGAAGTGGCTCGGATGTCATTAAAATTTCATGTACTCCCGCTGCACGCAAAATGCAGTGGGGTGGGGGGAGAGACCCACCAGCCCCCGGGCCAGTTTTCAAAATGAGTCAAGTCCACGGCTCCTTCCTGCCACAGCCACCCCCTCCCTCGGAGCTCTTAATGTAAAGTCTGACAAATGCAGGAGTCACCTAATTAACTTGCCTATTGTCTCCTAAAAATACCTCTTCTCCTGGCTTTCCTTTGGCAAAAAGAGCAGAGTGGTAATCAGACGGAAAGGTCACATTATACGAAGAAATGGGACTGTGTTGGACGAGGGCCTGCACCCCCCACCCCGCTGCCCAGATGCATGTCTTGAATGTGTTTCCTGTCTGCATCTCAATAACCAAGAAAGCAAAGTCGCCTTCAGAGAAACCCACTTGCTGCTGCCACAGGGAAGCTTAGTGGAGGGACCCCTCTCCTAGCTGAAGGGTGGGATTTTCCCAACTGCCTTACACAGCGGAGGCTCTTGCTCTACCACCTTGCTGCCTCCCACGAGCACGTGCAGGGATCCAGTTAACCACAGTGAAGACATTGGCTCATTCTGGCAGGAAGAACATAAGTGATCATTTCCACTGGGGTCCTTTGGGAAGCAGGTACCAAGACAGAGTTAGAAGGGTGAGGGGATTGTTGCTGGTCATGCCTGTGATCATTCAAAAGGAGAGGAAGCAGGATTGAGCAGGGCGAGCCTCAGACTGTGATGAGGTCTGACACTGGGGAGAAGGGAAGATGGATTAAGGAGGGAACACGTGAGGCTTCCACGCAGCTCTGAGCATCTTGGCCAGCCCAACGCAGAGCTTCAGCACAGCCTGCCTGTGGGAGGAGTTGGGCAGAAACGGCCAGCCCGGGGCTGTCCCAGCAGTGAGTGTCCACAGCTCCAGTGCTTTGCTCTTAAATCTCTCAGGGGCTTGCCCCAAGTGCAAGGCTGAAGTCACCTCAGGATGCTGGCTTTTTTCGGTCCAGCCTCAGTCCTCCCCTCCATTCCTTTAAGCAGTTTACCCTGTATTCCCAACAGCGGGCCACGTTATAGGCAATGGAGCACCAGTAGCTAGGAGTGGGGTTTACTTCCCCATTTCGGAGTAAGGGGTCGGAGGGTGGTCTGTAGCTGCAAGGACTTAGGGCTAGAGAGAGACTTTGCCATGCCCTGGGCTGGCAACCCTCGATATTCCAACCCAAGTCATAGGAGGTGGAGAAGTAGACTAAGAAGGATTTCCCAATTTCCAATTTGACAATTTCCAATTGTCATAAAGCCTCATCTCTATGGCCCACAAAAATCTGGGCAACTCCAATAACCAGTTCTGTTTCCCTTTATTCTCAGTGTTTATATACATGAGTAATAACATAAGCACATTGACCTTGTAAACAGTTATGGTACTGTAAGTAAGGTTGATGTCGTCTTTGATCATCATCCCAAAACAGTTCCTACTGTAGAAGTAACCGTTGTCAGCTATTTAGTGTGACTCCTGCCACAGCCCTGCCCCCTACCCCCAACTCTTTTATGCACACCTAGCAGTGGGGAGACTTGGAATCAAACCCAGGGCAGTTTGGTTTCAAAGTCTTTCCATTTTACCTCTGTACATTTTCTCCTCCACC EMBV3_07326 TACATGTACATCACGTCAAGGCCTGACAGAGCCGCCTCCGAGACACAGTGGCTGCAGCTG Gene GeneID:100125287|ATRIP:NM_001103330:5_cdna Constitutive 0 NULL GeneID:100125287 22 GENE ATRIP MGC148720 ATR interacting protein EMBV3_26310 AGAAGTATTCTGATGTTTCAGGTCTTCTTGCCAACTACACGGACCCGCAGAGCAAGCTGC Gene GeneID:533426|INO80C:NM_001105404:97_cdna Constitutive 1 NULL GeneID:533426 24 GENE INO80C NULL INO80 complex subunit C EMBV3_06473 ATAGAAAGTGAAACTGGTTGTTCAGTCTCTTCTCGTTGTTACTTGTTAGCAACCCACTAC Gene BVT0102_066464 + 1 EMBV3_04448 GK000019.2:23527010-23559325 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092773 TCONS_00092776 TCONS_00092774 TCONS_00092778 TCONS_00092771 TCONS_00092775 TCONS_00092777 1 XLOC_056976 Coding TCONS_00092773 XLOC_056976 Coding Coding RPA1 19:23476633-23529352 = TSS69732 5206 1 TCONS_00092773_2 616 17 0.901570621040252 1.65464733435333e-07 0.000167148819934803 6.17909437160564e-09 2.35875779746401e-08 0.000911764558110215 0.000570672039685132 0.00169726656870269 9.64596054112786e-05 0.0003601883916134 1.71989289468926e-05 6.68728018002648e-06 5.97237583170652e-05 0.000176506265401197 0.000601288082885991 0.000108286375940622 3.30559598436826e-06 8.04873191473582e-09 3.77184445613514e-08 0.0017570064003999 0.000679881081994468 0.000878974540335026 1.4878740807532e-07 4.49756084893716e-11 2.194350080067e-12 0.000329868888907498 0.000778995701956109 4.42251627277148e-08 0.000120657127917505 7.72571234427545e-09 7.2724923455349e-06 NM_001075176.1 RPA1 Bos taurus replication protein A1, 70kDa (RPA1), mRNA. 0.0 5164 100.00 0.549750288129082 NM_002945.3 RPA1 Homo sapiens replication protein A1, 70kDa (RPA1), mRNA. 0.0 3795 79.57 0.831732616212063 TCONS_00092773_2 sp|P27694|RFA1_HUMAN RFA1_HUMAN Replication protein A 70 kDa DNA-binding subunit; 0.0 1152 90.10 0.998376623376623 3 coding 0 0 0 0 -0.0858705970882149 0.619658251920786 -0.21419459044071 0.0318560963719211 CTTGGAGCGCGCGGGTCCCCGGGAGTAAAGCCAGGCTTGTGTTGGGGGAGCCGGAGCGCGGGAGTTGTTGCGGCGGAACCATGGTGGGCCACCTGAGCGAGGGGGCCATTGCGGCCATCATGCAACAGGGAGATACATCTATAAAACCCATCCTCCAAGTCATTAACATCCGTCCCATTACTACAGGGAATAGTCCACCCCGTTATCGACTGCTTATGAGTGATGGATTGAATACTCTATCTTCATTCATGTTGGCAACACAGCTGAACCCTCTTGTTGAGGAAGAGCGATTGTCTAGCAACTGTATTTGCCAGATTAACCGATTTATTGTGAACACCCTGAAAGATGGAAGGAGAGTGGTTATTTTGATGGAGTTAGAAGTTTTGAAATCAGCTGAAGCAGTTGGATCAAAGATTGGCAACCCAGTGCCTTATAATGAAGGACACGGACAGCAGCCAGTAGTTCCTCCTCCTGTCTCAGCAACCAGTCCACCAACCAGCAGGCCCCAGCAACAGAATGGGAGCCCAGGAATGGCTTCCACTGCATCTAAGGCTTTTGGTGCCTCAAAGACATTTGGAAAAGCTGGTGGTACCAGCCAAGTGAACAGCTCTGGGGGAACACAGGCCAAAGTGGTACCCATTGCCAGCCTCACCCCGTACCAATCCAAGTGGACTATCTGTGCTCGTGTCACCAACAAAAGTCAGATCCGTACCTGGAGCAACTCCCGAGGGGAAGGGAAGCTTTTCTCCATAGAACTGGTTGATGAGAGTGGTGAAATCAGAGCGACTGCTTTCAATGAGCAAGCGGACAAGTTTTTCCCCCTTATTGACGTGAACAAGGTCTATTATTTCTCTAAAGGCACCCTGAAGATCGCCAACAAACAGTTCACAGCCGTCAAAAATGACTACGAGATGACCTTCAACAACGAGACTTCTGTCATGCCCTGTGAAGACGGTCATCACTTACCCACAGTTCAGTTTGATTTCACAGGGATTGGCGACCTGGAGAGCAAATCTAAGGACTCGCTTGTAGACATAATCGGGATCTGCAAGAACTATGAAGATGTCACAAAAATCATAGTGAAGTCTAACAACAGAGAAGTCTCGAAGAGAAATATCTATCTGATGGATATGTCAGGGAAAGTGGTGAACGCTACCCTGTGGGGAGACGATGCTGATAAATTTGATGGCTCTAGACAACCCGTGATGGCCATCAAAGGAGCCAGAGTTTCTGATTTTGGTGGACGGAGCCTCTCTGTCCTATCTTCAAGCACCATCATTGTGAACCCTGACATCCCAGAGGCCTATAAGCTTCGTGGATGGTTTGACTCAGAAGGACAAGCCTTAGATGGCATTTCCATCTCTGATCTAAAGAGTGGAGGAGCAGGTGGGAGCAATACCAACTGGAAAACATTATATGAGGTCAAGTCGGAGAACCTGGGCCAAGGTGACAAGCCTGACTATTTTAGCTCTGTGGCAACTGTGGTGTATCTTCGCAAAGAGAACTGTATGTACCAGGCCTGCCCAACTCAGGATTGTAACAAGAAAGTGATCGACCAACAGAACGGATTGTACCGCTGCGAGAAGTGTGACAGTGAATTCCCCAATTTCAAGTACCGCATGATCCTGTCAGTCAATATTGCCGATTTTCAAGAGAATCAGTGGGTCACATGTTTCCAGGAGTCTGCAGAGGCCATCCTTGGACAAAGCACTGCTTATCTTGGGGAATTAAAAGAGAAGAACGAGCAAGCGTTTGAGGAAGTTTTCCAGAATGCCAACTTTCGATCTTTTACGTTCAGGATCAGGGTCAAACTGGAGACCTACAATGATGAGTCTCGAATTAAGGCCACGGTGGTGGACGTGAAGCCTGTGGACTACAGAGAATACGGCAGAAGGCTGGTCATGAACATCAGGAGGAACGCGGCGATGTGAGAGGATCGTGCCTATGGGGCAGGAGCTTGTGGATAGAGGGCTGAAGCAACCACCCCCCCCACGCCACCTCCGACCTCCACCCGCACCACCATTCCCGCCCTGACTGACGGCGGTGCAGAGCGCCCCTCTACCATGGACTAAGCCATCACCTCTCGTCACACCTGGGAACCCACTGGCAGCAAAGGCACACAGTGGAATACGCCTAAGTGAAAAGGGAAATACGCTTGTGGGGCTGTGGTATAAACCGTGTCAGACCTCGGGGTCAGCTGCGCGGACCGTAGTACCACTCACTCCCTGTCTTTAGGTTTTTGTCAGTTTTACTAAGAGCTCATTATTTTCAACCAGGAATTATGTCACAAGTAATTGACCCTCAATCTGTAGACAGTGAAATAAATTATGTAAGTCGGGTTCCTGCTTCTCCAGTGCTGACACCTTCTCAGCTCGGGTCCCTTCCCAAGGGGGAGCGCTGAGAAGTGGTTTTGTGGAGGAACTTGAGTGTTTTAGGAAGCCCGTCTTCCTCGATTTCAAAGGCTCCCTTTCTAGAGGGGCCACACAGTTGTTAATGCCTGGATTGGCAATAGGGTAGAATTATTAATCAAAGTCATATCTTTTATATCTGAAGAATATCCTTCCTTCAGGGTTTAATAGACTGAGTCAGATGGGTCTGATATTAATCAAAATGGTCTCTTCTGAGGAAGGCTGATAAGCATTGACTTGCTGTCCCCTAGAGACATCCCGGCAACTACAAAGCATCGCTTTCGTCTCCCCTTCAATTAATGTTGCATTTCTGTTGGTACGCCTTTTCTACCTGTACATGTTTCTTGAATTTGTATGTTTTCTTTTCTTGATTAAAGCTGTATTAAATAGAAGGGATTCTGAAGGGAGAAGCCCTTTGTTGCCATTGCCTTGTTTAATAAACAGTTTATTCTCTGCTTATGAATCCCACTTTCTTTGAATGCAAAGTGTTCTTGTAACTGGAAAGCAATTAATTAGCCTTCATAATAAATGTTCACTTGGGGAAGATGTTAACTCATTACAAACTCGAAGATTAGTCCAAAGCATAGAGATCATTCTTCCTAATGTCTGCAACCTTGAAATGCATCTTTAAAAGAATGAAAACACCAAAAACAAAAAGCCATTGTGCCCTGGAATGCTGATGATCCGGCACTTTGGGATTTTATTGATGTTTACACAGCGGTCTTAACACCAACCAGGCTTTGAAATGTGAACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTACTGGGCTTTTCAGTCGGCAAGAACATGCTTGCTCTGTGTGTTCCTAATCATATTAATTATCTATCCGGTCCGTGCAGCCCCTCATCTGGCGTTCGCAGCACACCTCTGCAAGCGTCCAGGCGGCATTGCCGTCTTCCCGTGGTGCCGGGCCCTGGTTTTTAATGTGGGCAAGCGCGGCACATGGAGACCCTTGCTGGGAGTGAGCACATCCTGCCTGTGTCATCCTTAGCCTTCTTCTTCCGGGAGGAACCAGCTGGCGTCAGGCAGGATGACTTCCATGGCTCAGAACCTAGGATGGCCTTCTCTCAGGCCCTCTAATTGTCTGGACACGGTCAGGATAGCCACTGGGCCACACTTGATTCTCCGGCCAAGGCCTCAGCGATTTTTTACGGAAGCTCCTTTCTGTCTGACCTTGCTCGTAAAGCGCTGACTAGAAAATTACAGTCTTCAGTGCTATGGTGGATTGACAAATTGTGGGTTGGAAGTGGCAATCTAGCTTTCAGCCTGGTAACCAGTCTTTTATATCTACGGCTCCCAGCATCCCCTCCTCTCCCCATCACGGCTCCCACCCCACGAACAGCACTGACCGGCAGCGTGACCCCGACGCGTCTCCTGGAACATGGTACCAGCTGCCATGCCTTCTCCACGACCATGCGGTGACACCAGCACGTCTCCGCGGATGTGATTAGAAGCCCACAGAGGGATGCTCTGAGGTGGGGCGGCTCCCTCGAGGGGGCATGTAGAGCAGATTCCCCACTAAAAAGCAGATCACCGGCAGAGGAGCATCAGAAATTGGCTCCACTGTTTGGCTTTTAAGAGCTTCAGGTCCCTGAGGGTCACCTAAATAGATTCTGGCCCACAGTTCTTAAAATTCTCTTGGAGATAGTTTAACCTCGAAAGGCTGTTCGTGTTCTATTTCTCATCTTTCACTTAGAGATCAATGTTTATTTTGTGTACACCATGACATCAGCGTTAGACAATTAGGGAAAAATCTAATCATTTTGTCTTTATTTTAAATGGCTCTTGGATCCCTTCCAGTCTCATTGTGATGGAGGCAGTGGGGGGGGAAAGGGTAATAATCTGATTTCTGTCCATATTTTCTGTGTTTTATGCTTTCCATTAAGGCCTTGCTAATCTCTGGTGTGCTCATTCTGACTTTTTGAACTTCAGGATCAAAAACTTCCCCTCCCCCACGTTCTTTCCTGAGTGGCCCATCTTCGAAAAGTATAAATAATATCGATTATGGCGTTTAATACCCTAATGAAACCCATAGTTATTGACTACGTAATTAATACACTGTCTAAAAGTGAAATTTGGTAGCCCAGTATATAAAGGTTTAGATATTGACTTGTGTTTCTTTGGCAATATGCCTTCTCGGATTTTATTTATAGAAAGTGAAACTGGTTGTTCAGTCTCTTCTCGTTGTTACTTGTTAGCAACCCACTACTCCCCCCCACCCCTAGTAAATTGATGATTTCCTTATCTCAAAGAGGATGTCCCCCACCCCCAGGGCTCCCACCCACCCTCTTTTATGTGGTTTGTTAGCTCATAGTGTTATAATCCACTCTGCTGCTAGAGCTATGGCTTTCAGAAACACTTTTAGGAATAATCTCTTTTTTTCCCTCTCAAAAAAGACTAGATGTTTAATTTTCATTGTTTTGAAAAAGAAGCCAACTGAGTATGTTTTATTATTAAGCTGATAAGTTTTGTTAATGTCAATTAAAAAAAAAAGAATGGGTACTATTTGAACCATTGATTATTTCTTAAGTAATCCATGTTCATTGTAGAAAAAATAACCTGCAGACAAGAAAAAACAAAATTGTCCTTAATCCCGCCTGTCAGCAATAATTGCTTATATAGCTGACTACTTTTCTCTCTGCTTTTATGTGTGTAATTATAGTTTTAACTTAAAAATGGGATTATATTATGCATATTATTCTGTAACACTTTGCTCCTAGCACTAAAGAATGGACCTCTTTCCTGTTTCAATAAAAATAGATCTGCATTAT EMBV3_06075 GGCACTCTGTCTATCAGATCTAATCCTTTGAATCTATTTGTCACTTCCATTGTGTACGGG Gene BVV0102_256777 + 0 NULL GK000001.2:43717621-43729915 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21842 CCCAGTGTCACTAGATGTCACACACATTTGTGGTGCTTTGATGTTTGCAAGTCTAACCTC Gene GeneID:510159|MAPRE2:NM_001034374:82_cdna Constitutive 2 NULL GeneID:510159 24 GENE MAPRE2 MGC127154 microtubule-associated protein, RP/EB family, member 2 EMBV3_39711 CCAGTCACCCTAATGACCTCTTCTGAGCTTGACCATCTGCCAAGACCCGGTCTCTAGATA Gene BVT0102_251317 + 1 EMBV3_37238 GK000004.2:118082233-118124483 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190528 1 XLOC_116563 NonCoding TCONS_00190528 XLOC_116563 NonCoding NonCoding - 4:118085564-118090025 - TSS142896 4461 3 TCONS_00190528_7 107 0.145707240529029 1 0 0.000298891092347338 0.000314225458614423 0.000230260054167897 0.000169396196021331 0.000524596436891298 0.000145135146121678 0.000186938358230768 9.01592986579922e-05 0.000361697103094234 0 1.02630976175919e-06 0 0.000155652746096588 0.000120210023175015 4.28921418350269e-05 3.55233235251483e-05 0 0 0.00030059713747168 0.000396568402449758 0.000223886169542581 0 0 1.50321889557581e-05 9.1634183962443e-05 0.00044537503404531 1.31341568298356e-05 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 3e-40 172 73.55 0.0647836807890607 0 noncoding 0 0 0 0 0.0298120067084226 0.863606475378989 -0.0103436630412612 0.873445462736399 GAGGGACAGGGGAGTCTCGGGAGTAGATCCCAGCCAGGCCTTCAAGGTGCTTGCGTTTTCCTGGAGGGCAGCGAGCTCAGCAAGGGGCACAGAAACCAGCGGTGCAGGGTGGGGGCTGCAGACACCCCGCCTGGACCAGTGGGGTGAGCGAGGCCGCCTGAACCCCCAGAGCCACCCCCAGCACTTGGTCCCGGGTGTCAGCGTGGGCGACCAGCAGATTCTCCTGGGCAGATACTGAGACACAGAGCCGAGAGGGGCCCAGGGTCTGCCTGCATCCCACCACCAAGCTACCTGTCTCCTTTAAGCGGAGCCCCAGCTGATCCGGGGAGTCGAGCCCTTACCCCTGGGTGCGAGGCTGTCCTGAAGAGGGTGGCGCCCCACCCCACCCGTCAAGGAAAGCTCAGTCTCCTGAAGGTGGAAGTGGTGGCCGTTGCTTAAGTCTTTCTTGAAAGTTTTGTCCACAAGACCCCAGAAATGTGGGTGCCGGGCTGGGGAGTGGTGCTGTTCCTCGAGGGGTGGTTGGGAAACGAGCTGAGAGGCCAGAGACGAGCCGCCCCGGTGACCCTAAGCTGGGGCCTGGAGGAGCACAGCCCCCCGGGAGTCCTCTAAGGCTGGAGACCCCGGCAGCCCAGAGCCCCCAGGGGAGGTGTGAGTGCCAGCCAGGTGCGTGGAAAGCTGGCTGGGCTTGGGAGCGAGTCTCAGCTTCAGGCGCCTGCATCTTGCAGCCAGCTTCCTCCTCCCCTCCCTCTCCCACTGTCATGGGCAGAGCTGTGTCTGCCAGGATTTGTGCCCGGCCCCAGCACCAGTGGAGGTGACCTTATCTAGAGACCGGGTCTTGGCAGATGGTCAAGCTCAGAAGAGGTCATTAGGGTGACTGGGGTCCGGGAAGGAGAGGAGAGACCGTCGCCCAGAGGAAGACACGGACGGAGAGCCTCGGGGTGGCAGGCGCAGAGGCTGAGGCTATGTGACTGTAAGCTGATGGTCATCAGCCTCAGCTCTATGTCAGTAGAGGCGGGAAAGGCCCTCCTCAGAGGTTTCGGGAGGAATGCGGCCTTGCTGACACCTCGACTTCAGACCTCTGGTGTCCAGAACCATGAGGAAATGCACTTCTGTTAAGCCCCCTGGCACCCCTGGGCACAACATCTCAGCTGTGCCAGGTGCAGAGACACGGCGTGAGGAAGGCATGGGCGAGGGCAGGGAGAGTCACAGCACGCGTGTGGCTGGACCTCAGAGCTTCCCGAGCGCCGACGCTTGAGCCAGGCTCTGAGGACAAGCAGGAGCGGCCAGGCGGGACCGACAGAGACCACCAGCTCCCAGGAGCGGGCGTTTCCCCCGGCGGGAGCAGCTGTGTCGACGGGGAACGACGTGTCAGCATTTGAGCGATGGAATGACGCAACAGTCGTGTCTTCCATGGCCCGCTTTTCTCAATCGGTTCTCTACCATCAGTATATTCTCCACGTGCTGCGCAGCGGTGACTGTTATAAAAGCTGCGTATAATATCCCACGGAGAAGATGCACCGGAATCTCCTTAACTCTTCTACCCGCTCCTGTCAAGTCGTTTCAGGTGTTTAAAGGGGGGATGATTTAGCCTCACAAAGGATCCTCATTAGCAAAATAGCTGCTTTTTAGATGAACCTGGAGACATCATTGTGTCTCATTCATCTGATCATTCAAGAAATATTAAAGCCCTTTCCCTCTTCTGGGCACTGTACCAGTGCAGGAGTTACAATGGAAGATAAGAGAAGACCACCGTCCTGACCACAACCACTCAGGGTTTGCAGAGGACAGAGGAGTGTGGGTCAGCTCCAGAAAGGAGAGCCTCACGTGCTCTGAGATGTTCCGAGATTAGGAAAGGATGAATTTTGATGTCCTTCCATCTTCCCACACTGCTGGGCTGCCCAATAGCAATGAAGGGAGTGATGTGTGCAGGGCCAGGCCTCAAGGGACATGGAAACGTTCACCTTTGCCCTCTTGGAATGTCTGATCGTCCCGTTCAGAGCCCAGAAGGACTGCTGACCGAGAGGTCACGTGGGGATGGGCGGAAGCCAAGAGCCAGCACCCAGGCCCCAGACCCTCCCTGGGGGGCCACTGCAGGACTCAGGCGCACAAGCGAGCACAGGGAACCTGAAGGCCGCCAACCCACTCCTGCCCACCCCAGGAGGATGGTCGGTTCACAGGCAGGCCTCTGAGGGTGGGAGGGCTGCGCATGGGCGGGTGCAGGCGGCTGGGTGCAGGTGAGGCGTGTCCAGACTCCTTGGGAGAGGGACTAGCAGATGCTAAACGCCAGCGTGAGGTCACAGTGCGTCTGAGGGACAGTGGAAAAAGAAGCCCGTCTACATGCCTGAGCAGGAGCGCATGAGAGGAGTGGGGCTTGTGAGGAGGCCACAGGCTGGGCAGGTCTGTGAATAGGTCACTAGTCTCGGTGCTGCCGGAACGCGTCATCGGTCTACATGATTGTCTGGAGGCTAAGAGAGCCTGAGGCCACCTGGACCTGATGATGGCCACACAGTCCCTGTCCACCACAAAGCCCCTGATGACAGAGAGGAGCTGTACTGCAGAGTATAGTCCTGGTGGGGTCAGCAGAAGGACGTGGGAGCGTATGGGCCCAAGACGGCATCTGCTATGCTAACAGCCGTGCAGTAACTCATAATCCAACTTGACCAGTCTCTTATAAGAGGAACTTCGGGCTTCCCTGGTGGTCCAGTGGTGAAGAGTCCGTCTTGCAGTGCAGGGGACACCAGTTCAATCCCAGGTCCAGGAAGGACCTATATGCCGCGGAGCGATGAAGCCCAAGTGCCACAACTACTGAGCCCGCCTGCTGCAACTCCTGGAGCCTGAGCGCCTAGAGCCCGTGCTCCGCAACGAGAGAAGCCACGGCAGTGAGAAGCCCCACACGCAGCTAGAGAGTAGCCTCCACTCGCCACAGCTAGAGAAATTCCTCATAGCAACGGAGACCCAGCACAGCCAAAATAAATAAGCAAAATTTTAAAAAAGACCTTACTTCCAAATACAATTACATTCATAGGTACAAGGGGGAGGGCTTCAACATACGAATTTAGGGGAGCGCAATTCGGAAATAAAGTTTGTCTCCCAATAAAAAGACATGCCCAGATTGGTTAGCTCAGCGTCTCGGTGATACCCCGACTCTGGTTCAGCTTCTCTGCCATCCTCTTGACTTTCCTGCACAAGTATCCGATGTCACCTGTGGTTCTCAGCTTCCAATCCTCAGATGCGACACCTAGAGTCCGAACAAGTATTTCCTCGCCTGTAAACTCCTGTTTGCAAGGAAAGTTCCAGATGCCCCTGGCAGACTCCCGCTGTCATTATCCAGAACTGTCCTGTGACCTGGCCCAACTCAGTCACTGGCATGGAACGAAAATGATGATGTTTAGCTCAGACCAACTGAGATCTACCCACTGGAGCTAGAAAGGGTTAGCTCCTCAGAGGCTCTCGGTCCCTCTGTAGGTAGAGAAAATCAGAGTTCTGCCAGCAAGCCTGCGCCAGGCCCGGGGACCCCAGGAACATCTCTGTAGTGGGCAGTGATTCAGGGAGGCAGCAGGTGGGGGCGGGGCCTGGAAAGAGGAGGCCCACCAGCTGGTGCAAAGACAGAGCCCAACCCAGAGGCTCCTGCACGCATCTCCCCGCCCCAGCATGTCACCACGGCAACCCAGCGCCCCAGCGACTCCCCATCGAGTTTTAACCCAAATTACATTTTCCAGATCTAAAATCAGAGGCGCTGCGAGGATTCATGTTAACAACCTGAAGCTGCGCAAAGATGACGGCGGAATAGGCAGACCTGACCCACGATATTTTCTAGTTGAACAGGCAAACCCTGGTTGTTCACAGCCCAAACGGACAGGCCTTTTCCTCCCACACTCCTTTTAGAGGAAGAAGCAATCTTAGGGTTTTCAGTGGCAGTGCTTGTTTTCCAGGGAACATTCCGGCCTCACTGTAATTCTATTTGCCTCTCATCTCACTCCATCTTCCCCGACGTTCAGGACAGCAGGCTTCAGTCACCAGGGAAGAGATAATTACAGCCGGCGGGTGCTGTTTACTCTGGGAGAAATGTGGGCAGGTACACCGCTGGAAGACTTCCGGGGCTAACAATGCGAGGGTCTCGGTCAGCGTTCAGGTGACCGGAAGTGTCACCGACCCAAATGCCTCTTAAATCTCGCTTATAATCTCTTTCTTTGGTTCAGGTCCTTCTCACCTGATTACTCTGAAAGTTTTTATTCTGCGTGTCTTGAGAACAAAATTTCTCTGAGACTTGGGAATGTTAAGAAAAGTCTGGGCGAAGCATAAAACAGGCTGTGGGTCACTATTTTCACAAGGCATAGTCAGAGCCATTTGAGTGGGACTTCCGGCCCTCTAGTCCCTGTCAGTTAAAAACACCCTGATGTGATTAAAGGTCGTGAGGGATGCAAGCTATGATATCAGTTCAGTCGCTCAGTCGTGTCCTAC TCONS_00185495 . 5' 2567 TCONS_00185495 . 5' 2567 EMBV3_31391 ATTCCAAATAAGTCCTTGTGGACTGTGCCATCTGTGGGAAACCCCAGGGCAAATGTTTAC Gene GeneID:507688|GLDC:XM_002689594:5_cdna Constitutive 0 NULL GeneID:507688 8 GENE GLDC NULL glycine dehydrogenase (decarboxylating) EMBV3_34941 TGCGTCCCGCTGGTTCTGCGAAAGTTATATCCAAATACCCCGCTGTCCGCCCCAAATAAA Gene GeneID:787057|LOC787057:XM_002695279:50_cdna Constitutive 0 NULL GeneID:787057 18 GENE LOC787057 NULL similar to zinc finger protein 415 EMBV3_21753 GTGGATTTCACAGTTGGGGTGGAGTTTGAAGAGCATACAAAGGGCCTGGACGACCGGAAA Gene GeneID:616639|RBP2:NM_001101259:81_cdna Constitutive 0 NULL GeneID:616639 1 GENE RBP2 NULL retinol binding protein 2, cellular EMBV3_36781 GGCCCCTGAACTGGAGGAGCAAGTTGTGTACCTGCAAAGACTGTATGAAAATGTATGGCG Gene GeneID:505130|UBR7:NM_001082601:163_cdna UTR3_Alt 2 NULL GeneID:505130 21 GENE UBR7 C21H14ORF130 MGC155078 ubiquitin protein ligase E3 component n-recognin 7 (putative) EMBV3_34999 CCTTTCCTCATGCTTTTTTTTCAAGTGGAAATAGAGGTCAATTGATCGTCCTAAACTAGG Gene GeneID:505754|DUSP19:NM_001098878:14_cdna Constitutive 2 NULL GeneID:505754 2 GENE DUSP19 NULL dual specificity phosphatase 19 EMBV3_29917 CTTGACAACTGCTACGAGTCAGTTTCCTAAAGTCAGGTTGTAGGTAATAGTGTATGTTGC Gene GeneID:515944|MFSD8:XM_002694355:116_cdna Constitutive 2 NULL GeneID:515944 17 GENE MFSD8 NULL major facilitator superfamily domain containing 8 EMBV3_05418 CCTCCAAACCTAAATAGCCTTCCTATTGTGCCTGGTTGGTCATTTCCTCCCAAATGCCAC Gene BVV0102_000266 + 1 EMBV3_18738 GK000030.2:32719665-32834961 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18058 GTCCTCGATGAAGTGTTACCGAAGCAATGCCTATACTATCACAACCAGTTCAAGGATGGC Gene GeneID:540647|GPR19:NM_001101214:116_cdna Constitutive 0 NULL GeneID:540647 5 GENE GPR19 NULL G protein-coupled receptor 19 EMBV3_26722 GAATGTCAACGTGCAGAACTTCCACATCAGGACGACCCCGTCACCAACCTGAACAATGCC Variant GeneID:522269|ACTN4:NM_001098052:643_cdna 612^690 1 EMBV3_37060 GeneID:522269 18 GENE ACTN4 NULL actinin, alpha 4 EMBV3_31162 TCAGGAGCAGGCAGCATCCCCAAATGCGAAGATCCATATCCTGAAGAAGAAAGGCCGGAA Gene GeneID:506294|KIF22:NM_001101868:260_cdna Constitutive 0 NULL GeneID:506294 25 GENE KIF22 MGC148851 kinesin family member 22 EMBV3_00134 GAGCCTGTGCTGAGTCTGAACCACAACTACTGAACCCATACACTGCAAATACTGAAGCCG Gene BVT0102_014857 + 0 NULL GK000002.2:34408394-34487608 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102162 TCONS_00102160 TCONS_00102161 1 XLOC_061822 NonCoding TCONS_00102161 XLOC_061822 NonCoding NonCoding - 2:34444985-34449046 - TSS76156 1309 4 TCONS_00102161_6 51 0.387318563789152 2 0.67807881773399 0 0 0 0 0 0 0 0 0 6.28647207628309e-06 3.49662711693545e-06 0 0 0 0 0.00180215741351227 2.91393972280636e-23 0.000594915867240764 0 0 2.58905143608726e-16 0.00058957102564597 0.00134931379982076 0.0017546664308604 0 0 0 3.16887119702308e-19 0.000250439125483537 9.82944198906304e-05 NM_001192140.1 TBX21 Bos taurus T-box 21 (TBX21), mRNA. 4e-45 187 73.16 0.248281130634072 0 noncoding 0 0 0 0 -0.0815680165260388 0.534702095679368 -0.00613931705984477 0.898012225197738 GTCAAGCGACTAAGCAATTTCCTTAAAGAATGTGGGCAGGCCCTCTGTGCCCCTTCTTCCTTTATGCTGGCAATAATACAGGCGATTTGGCTGGAACTGAAACATCTATTTTGTACCATGGGAGAGCACGCTAAGGTTAATGGAACAGGAAAAGGATCGCAAGTCCTTGATGGTCTGGAACTTCCATGACGGTGAAATACTACCTGCATTTGGACTTTGGGGCCCACATTTTAGCTATTTGACCCAGTCCTGAAGAGAGTGAAGTCTGATGGCAAAGGAAGAGGATTAGAAATCGGAACAGGAGACAACTCAAAGATTCAAAGGAGTAATGTGTGCATTTGCCAAACAGGTTAGACATGCAGTACGGAATTGATACCGAAGCCAGATAAGGTGATGTTTTACTTGCTACCGAACAACTTGACTGTGTTTTGTAACTGGATCCATTTCTATGTTCAAGTGTTCCGGCAAAGCCATGTGTGTGTGTTTCCAAAAGCTAAGAAGAAAGGGGATTTTCCCCATTGTGGCAAAGCTAGCTGAAGAAACCTGTTTCTAGATGCTGTAAAATCCTGTAGTGGCAGCTGCTTTAACTGGACAGCAAGGGGAGAAATGCAAAAGGCAAGATGGAAACAGCCATTGTAACTGATGCTATGCCTCTCACTCCTCCCTGAAGATTCCTTTAATAGCTGTTAGTGTTTTTTCACTTTTTGACATGAGTTCTGTATTTTAACACTCTTTCTCCAGATCTCCTCACGGCCACTTTCTCACCTCCCTCACGTTTTGCCCAGATGGCCCCTTCGAGTGAGCCTTCTCCGACCTCCCCATTCCAAATTACAGCTCTAAGCTTCCCTGGTGGCTCAGTGGTGAAGAATCCACCTGCCAATGCAGGAGACACAGGTTCGATTCCCGGTCCAGGAAGATCCCACCTGCCGAGGAGCACCTAAGCCCGTGCCCCACAGCTATTGAGCCTGTGCTGAGTCTGAACCACAACTACTGAACCCATACACTGCAAATACTGAAGCCGAACACCCTAGGGCCCGTGTTCCACGACGAGAGAAGCCGCAACAAGAAACCCAAGCACAGCTAGAGAGTAACCTCCACGTGCCGGCGACTAGAGAAAACCCCACGCATCGGTGAAGACCCAGTCCAGTCAAAAATAAATAGATAAAATTGCAGTTCTTCCCTCTCTAAACCAACATTCCCTATTCCTTATTTCTACTTATATTATCCATAGTCCTATTTTATTCTTTTAAAGTGTAATATTTAATGCATACAAAAGGATATACATATACATGTAAATAATAAATCATAT TCONS_00102159 s 3' 36593 TCONS_00102159 s 3' 36593 EMBV3_20983 GATTCTCCTAGAGGGTCTTCAGATGGAGCATAGCCCTACTGATACCTTGACTTCACGCTG Gene BVV0102_192303 + 0 NULL GK000027.2:20636850-20846015 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13184 CGAGGATTCCACATGCCGCAGAGCAACTATGCTGGTGAACTACAATATGAACCCATGCTC Gene BVT0102_307134 - 1 EMBV3_00797 GK000003.2:8463400-8483557 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30302 CATTAACCCTCACTCACCTCCTGTGTTATCGCTGGGCTGTCATGATTTCCTGCCTTATGC Gene BVV0102_025260 + 0 NULL GK000020.2:24029123-24033745 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38628 GCCCTGAGGACCTGTTGACATGGGGGTGCTAACAGGAAGGAATGGAGATTTCTAGCTAAG Gene GeneID:525428|E2F4:NM_001075873:306_cdna Constitutive 0 NULL GeneID:525428 18 GENE E2F4 MGC139939 E2F transcription factor 4, p107/p130-binding EMBV3_41563 GCTGCTGGGATTCTTCGGTTAGTTATATAACCACTCTCGACAGCGTCGTATAGCTGTCTC Gene GeneID:511248|NUP35:NM_001098940:26_cdna Constitutive 0 NULL GeneID:511248 2 GENE NUP35 MGC160073 nucleoporin 35kDa EMBV3_18784 TGGAGACATCAAGGTTAAGAAAGAACGGGACCCCTAGGCCACCACTGCCACCAGTCTACT Gene GeneID:523963|LOC523963:XM_002699526:72_cdna Constitutive 0 NULL GeneID:523963 X GENE LOC523963 NULL similar to interferon regulatory factor 2 binding protein 1 EMBV3_12097 GCTTGGGGATGGAAAAGGTGAGGATGACAGACAGGAGCATGAATAAGCATTACAAAGGGG Gene BVV0102_188165 + 1 EMBV3_31550 GK000005.2:31738309-31775732 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22846 CCTCATCTCCAGTTGAGGCAGGAACCTCAGGGTTCCTCTGATTTCAGACTCCGATCGCAG Gene BVV0102_243075 + 0 NULL GK000030.2:14084895-14203646 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201120 TCONS_00149038 TCONS_00063810 TCONS_00162571 TCONS_00200854 TCONS_00186491 TCONS_00054133 TCONS_00142473 TCONS_00162302 TCONS_00218950 TCONS_00131534 TCONS_00123275 TCONS_00156651 TCONS_00063805 TCONS_00186556 TCONS_00240372 TCONS_00021875 TCONS_00255144 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00238289 TCONS_00186558 TCONS_00131532 TCONS_00147823 TCONS_00032734 TCONS_00033204 TCONS_00131535 TCONS_00222181 TCONS_00149042 TCONS_00111145 TCONS_00131533 TCONS_00232767 TCONS_00222116 TCONS_00222182 TCONS_00063813 TCONS_00231768 TCONS_00186557 TCONS_00233458 TCONS_00217532 TCONS_00129560 TCONS_00207145 TCONS_00218944 TCONS_00186834 TCONS_00098203 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00131531 TCONS_00238281 TCONS_00230828 52 XLOC_122768 XLOC_090915 XLOC_038536 XLOC_099452 XLOC_122505 XLOC_112543 XLOC_031942 XLOC_086898 XLOC_099184 XLOC_132269 XLOC_080239 XLOC_074829 XLOC_095111 XLOC_038531 XLOC_112608 XLOC_147036 XLOC_012548 XLOC_158076 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_144956 XLOC_112610 XLOC_080237 XLOC_089710 XLOC_018972 XLOC_019438 XLOC_080240 XLOC_135490 XLOC_090919 XLOC_067045 XLOC_080238 XLOC_142251 XLOC_135425 XLOC_135491 XLOC_038539 XLOC_141256 XLOC_112609 XLOC_142940 XLOC_131531 XLOC_078273 XLOC_125663 XLOC_132263 XLOC_112885 XLOC_058449 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_080236 XLOC_144948 XLOC_140318 NonCoding TCONS_00238281 XLOC_144948 NonCoding NonCoding - 9:2638-2927 - TSS177959 289 1 TCONS_00238281_1 49 1 0 2.35392749628492e-05 0.00564427719591084 3.55785187604303e-06 0.000148459313664162 0 0 0 0 0 3.25078518011764e-05 0 0 0 7.33102054731705e-06 6.28757612155257e-07 0 0 0 0 0 0 0 0 0 0 0 0 0 3.35959149657186e-06 1.60027897932342e-06 0 noncoding CTGTGAATGAAGTCAACACGAAGGGGCAGTGACTCACCCGAGCATCTTCCGGAAAAACTCCCAGGTTCCATATACAGCTCGACAAGTGGTGTCTCACCCCCTGAACACCTCGAGAGGCTAGGGAAGTTCCATGCCTCAACCCAAGACCAGGCCTGACTCTCCTGTCCCAAGTCTGCAGGGACCCTGCGTTCGGAGTCTGAAATCACAGGAACCCTGAGGTTCCTGCCTCACCTGGAGATGAGGCCCTCTTCCAATGCACAAACCCCAATGGAGTCCCGAGAGGCCCCTC TCONS_00234581 . 5' 242109 TCONS_00234581 . 5' 242109 EMBV3_21536 TGGTGGAGCGGGTGCAGAGGTTTTCCCACAGCAGAAACCACCTGACCTCAACCCGCTGAA Gene GeneID:373543|STK25:NM_183407:5_cdna Constitutive 0 NULL GeneID:373543 3 GENE STK25 MGC128993 serine/threonine kinase 25 (STE20 homolog, yeast) EMBV3_07358 TATGCACTTCCCTGGTGGTTCAGTGGATAAAAACCACCTGTCGATGCAGGGGACATGGGT Gene BVT0102_381577 - 1 EMBV3_27814 GK000002.2:107289223-107298619 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21784 TTAACTTCCCTCATCCAAATGTATTTACAGGCTTTGAAACATCTGTTTACTAGTCACAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33656 AACATGGGTATCTTGCATTGGCAGACATGTTCTTTAACACTGAGCCACAAGGGAAGCCGC Gene BVT0102_193364 + 0 NULL GK000015.2:47070604-47073271 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14601 AAGAATGGGGATGTGGTGGACAAGTTTGTGGGGATCAAGGATGAAGACCAGCTAGAGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34352 TCAGTTTTCAAATCCACCTGTTAGGCAGGTATGGCCAATGTGTTTTATCAGCCGCACAAG Gene GeneID:527124|CDKN2B:NM_001075894:89_cdna UTR3_Alt 1 NULL GeneID:527124 8 GENE CDKN2B MTS2 cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) EMBV3_05341 TATTGTCCACGACCTTCCTGCAGCAGTTCTGAGTTACTGTCAAGTATGGAGAATCCCTGC Gene GeneID:614817|PSMG1:NM_001076347:39_cdna Constitutive 3 NULL GeneID:614817 1 GENE PSMG1 MGC140766 proteasome (prosome, macropain) assembly chaperone 1 EMBV3_36671 TGGGCTGTGAACCCAAAATGGAAAGGTACCTCTTCTCAGCCACCAGGCACAGCATCTTCT Gene GeneID:506243|PLA2G2E:XM_002685730:454_cdna Constitutive 0 NULL GeneID:506243 2 GENE PLA2G2E NULL phospholipase A2, group IIE EMBV3_17646 CAAGGAGCAGTCCAAGCACGAGCTGATGGACAAGGACAGGGAGGAGCACCTGTTTTTCTT Gene GeneID:519687|CCDC37:NM_001076866:29_cdna Constitutive 0 NULL GeneID:519687 22 GENE CCDC37 MGC142880 coiled-coil domain containing 37 EMBV3_32257 CTCTTGCCAACATGCGTAAAAAGGGAAGCCAGTTACAAGTGCAAATAATGTGGTATTCTT Gene GeneID:615095|KHDRBS3:NM_001083512:23_cdna Constitutive 2 NULL GeneID:615095 14 GENE KHDRBS3 MGC142791 KH domain containing, RNA binding, signal transduction associated 3 EMBV3_40459 CGGGCCCTCATGTGTGTGGCTGTAGCCTTATCTGTGATTGCTCTGCTTGTTGGTATCTGT Gene GeneID:512703|CLDN17:XM_002684611:81_cdna Constitutive 0 NULL GeneID:512703 1 GENE CLDN17 NULL claudin 17 EMBV3_08778 GCAAAGTCTCCTTACTCAGCGACCTTAGAGAGGGGTAGCTTAGTTCACCTGTATCTTTGC Gene GeneID:508297|ANKRD43:XM_002689150:152_cdna UTR3_Alt 1 NULL GeneID:508297 7 GENE ANKRD43 NULL ankyrin repeat domain 43 EMBV3_19684 GAGAGCGACCTGTTAGATGTGAACCAGATCATCAAGGACTTGGCCTCCATGGTTTCAGAG Gene GeneID:535306|TSNARE1:NM_001082446:116_cdna Constitutive 1 NULL GeneID:535306 14 GENE TSNARE1 MGC148885 t-SNARE domain containing 1 EMBV3_36665 GAAGCATCACAAACAGAAAAGATCTCGGACATTGTAGCGCTGTCAGTCATGGCCAACCCG Gene GeneID:787233|BOSTAUV1R407:XM_002695263:265_cdna Constitutive 0 NULL GeneID:787233 18 GENE BOSTAUV1R407 NULL vomeronasal 1 receptor bosTauV1R407 EMBV3_20915 TTCAACTGGACTGAAGAGGACAGCGAGAGGCCTTGTTTCCATGGGCATAGCCTCCAGGGA Gene GeneID:511236|TAF1B:NM_001075503:111_cdna Constitutive 0 NULL GeneID:511236 11 GENE TAF1B MGC139058 TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa EMBV3_35363 AAAAGGCACATTAATTACTCTAATGAGGTCAGGAGAGACCCCACGCTCTGCCATCCGGAG Gene BVV0101_087460 - 1 EMBV3_07033 GK000007.2:45363069-45407609 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11773 ATATTCAATAGGAGGAGCCTTGGGGGAGAAACACTGCCAAGGGTGGTAATCTGGGAGGTA Gene BVT0102_186876 + 0 NULL GK000016.2:30703426-30708031 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068981 TCONS_00068985 TCONS_00068979 TCONS_00068988 TCONS_00068989 TCONS_00068980 TCONS_00068984 TCONS_00068987 TCONS_00068982 TCONS_00068986 TCONS_00068983 1 XLOC_041835 Coding TCONS_00068984 XLOC_041835 Coding Coding CDC42BPA 16:30704334-30895792 j TSS51528 9368 2 TCONS_00068984_9 875 0.0274338172502135 34 0.951247538611803 0.00260277813518038 0.00256942075808175 0.00273106248996041 0.001396518584618 0.00115279842013946 0.000607188391513298 0.000950271026137689 0.0021037956582729 0.0016814866918075 0.000464628737796998 0.000133216166722511 2.61645503469176e-05 0.000392721132648198 0.000746825132554962 0.0004870801710859 8.38520920141885e-98 9.05327352463312e-68 1.93726211921054e-14 0.00260181924251803 0.00140328419944665 0.000617978456673813 1.49500525007465e-11 3.70943474012155e-13 1.43088492022884e-12 0.00312837999897527 0.00317541826128009 0.00184030180528917 1.2823815948933e-05 4.75521275345505e-08 5.52258176667832e-56 NM_001192937.1 CDC42BPA Bos taurus CDC42 binding protein kinase alpha (DMPK-like) (CDC42BPA), mRNA. 0.0 9752 99.96 0.577711357813834 NM_003607.3 CDC42BPA Homo sapiens CDC42 binding protein kinase alpha (DMPK-like) (CDC42BPA), transcript variant B, mRNA. 0.0 8071 87.68 0.687553373185312 TCONS_00068984_9 sp|Q5VT25|MRCKA_HUMAN MRCKA_HUMAN Serine/threonine-protein kinase MRCK alpha; 0.0 1763 96.62 0.998857142857143 4 coding 0 1 0 0 0.0763428084960059 0.541643161579181 -0.014175811215239 0.782014684644149 AATTTCAAAATGGGTTCCTTGCCTCTTTTCCTACTGGAAGATCTAGGAGATTTTTCTCCTTTACTTACTGTTACCGTGTGATTAAGCTCCTGGAGGTGAGACTAAAAAATTGTGTAATTCTCCCTAACTGGGTCCCCTGCAGTTTTGAACTCTCAGAGTTGTCCAGACTCTAGAAATTATTCCCAGTTGAGTTTGTCTTACTCCCAGCAGCATCAGTTCTGGTTTCTGCGCCTCTTTCTGCTCTGGCATCTCTGCTCTGACAGCATGTTTTCGTGAAGAAAGGGATGTGTTAGTGAATGGAGACAATAAATGGATTACAACTTTGCATTATGCTTTCCAGGATGACAATAACTTATACCTGGTTATGGATTATTATGTTGGTGGGGATTTGCTTACTCTACTCAGCAAATTTGAAGATAGATTGCCTGAAGACATGGCTCGATTTTACTTGGCTGAGATGGTGATAGCAATTGATTCAGTTCATCAGCTGCATTATGTACACAGAGACATCAAACCTGACAATATATTGATGGATATGAATGGACATATTCGGTTAGCAGATTTTGGTTCATGTCTGAAGCTGATGGAAGATGGAACGGTCCAATCCTCAGTGGCTGTTGGAACTCCAGATTATATCTCTCCTGAAATCCTTCAAGCCATGGAAGATGGAAAAGGCAGATATGGACCTGAGTGTGACTGGTGGTCTTTGGGGGTCTGTATGTATGAAATGCTTTATGGAGAAACACCATTTTATGCAGAATCTCTGGTGGAAACATATGGAAAAATCATGAATCACAAAGAGAGGTTTCAGTTTCCTCCTCAAGTGAGTGATGTGTCTGAAAATGCTAAGGATCTTATTCGAAGACTCATCTGTAGCAGAGAACATCGACTTGGTCAAAATGGAATAGAAGACTTTAAGAAGCACCCATTTTTCAATGGAATTGATTGGGATAATATTCGAAACTGTGAAGCACCTTATATTCCAGAAGTTAGTAGCCCAACAGACACGTCGAATTTTGATGTGGATGATGATTGTTTAAAGAATTCTGAAACGATGCCCCCACCAACACATACTGCCTTTTCTGGTCACCATCTGCCATTTGTTGGTTTTACATATACTAGTAGCTGTGTTCTTTCTGATCGGAGCTGTTTACGAGTTACAGCTGGTCCCACACCATTGGATCTCGATGTTAATGTGCAGAGGACTCTAGATAACAACTTAGCAACTGAAGCTTATGAAAGAAGAATTAAGCGCCTTGAGCAGGAAAAACTTGAACTTAGTAGAAAGCTTCAAGAGTCAACGCAGACTGTCCAGGCTCTGCAGTATTCAACTGCTGATGGTCCACTAACAGCAAGCAAAGATTTAGAAATAAAAAGCTTAAAAGAAGAAATTGAAAAACTAAGGAAACAAGTAAGAGAATCAAGTCACTTGGAACAGCAACTTGAAGAAGCTAATTCTGTGAGGCAAGAATTAGATGATGCTTTTAGACAAATCAAGGCTTATGAAAAACAAATCAAGACATTACAACAAGAAAGGGAAGAATTAAATAAGGAACTAGTCCAGGCTAGTGAGCGATTAAAAAACCAATCCAAAGAGCTGAAAGACGCACACTGTCAGAGGAAACTGGCCATGCAGGAATTCATGGAGATCAATGAGCGGCTAACAGAATTGCACACCCAAAAACAGAAACTTGCTCGCCATGTCCGAGATAAGGAAGAAGAGGTGGACCTGGTGATGCAAAAAGTTGAAAGCTTAAGGCAAGAACTGCGCAGAACAGAAAGAGCCAAAAAAGAGCTGGAAGTTCGTACAGAAGCTGTGGCTGCTGAAGCATCTAAAGACAGGAAATTGCGTGAACAGAGTGAGCACTATTCTAAGCAACTGGAGAATGAACTAGAGGGACTGAAGCAAAAACAAATTAGTTACTCACCAGGCGTATGCAGCATAGAACATCAACAAGAAATAACCAAACTAAAGACTGATTTGGAAAAGAAAAGTATCTTTTATGAAGAAGAATTGTCCAAGAGAGAAGGAATACATGCAAATGAAATTAAAAATCTGAAGAAAGAACTACATGATTCAGAAGGCCAACAACTTGCTCTCAACAAAGAAATTATGATTTTGAAAGACAAATTGGAAAAAAACAGGAGAGAGAGTCAAAGTGAAAGGGAAGAATTTGAAAATGAGTTCAAGCAACAGTATGAACGAGAAAAAGTGTTATTAACTGAAGAAAATAAAAACTGACAAGTGAGCTTGATAAGCTTACCACTCTGTGTGAGAACTTAAGTGCACGCAACCAGCAGTTAGAAGAAGAGGTCAAAGATCTAGCAGATAAGAAGGAATCGGTTGCTCATTGGGAGGCTCAGATCACAGAAATAATTCAGTGGGTCAGTGATGAAAAGGATGCACGAGGGTATCTTCAAGCCTTAGCTTCTAAAATGACTGAAGAATTGGAAGCTTTAAGAAACTCCAGCTTGGGGACCCGAGCAACAGATATGCCCTGGAAAATGCGACGTTTTGCAAAACTGGATATGTCAGCCAGACTGGAGTTACAGTCAGCTCTGGATGCAGAAATAAGAGCCAAACAGGCCATCCAAGAAGAGCTGAATAAAGTTAAAGCATCTAACATCATAACAGAATGTAAACTAAAAGATTCAGAGAAGAAGAACTTGGAACTACTATCAGAAATCGAACAACTGATAAAGGACACTGAAGAGCTTAGATCTGAAAAGGGTATAGAGCACCAAGACTCACAGCATTCTTTCTTGGCATTTTTGAATACGCCTACCGATGCTCTGGATCAATTTGAAACTGTAGACTCTACTCCACTTCCAGTTCATACACCAACCTTAAGGAAAAAGGGATGCCCTGGTTCAACTGGCTTTCCATCGAAGCGCAAGATTCATCAGTTTTTTGTCAAATCTTTTACTACTCCCACCAAGTGTCATCAGTGTACATCTTTGATGGTGGGTTTGATAAGACAAGGCTGTTCTTGTGAAGTGTGTGGATTTTCATGTCACATAACTTGTGTAAACAAAGCTCCAACTGCTTGTCCAGTTCCTCCTGAACAGACAAAAGGTCCTCTGGGTATAGATCCACAGAAAGGAATAGGAACAGCATATGAAGGGCATGTCAGGATCCCTAAGCCAGCTGGAGTGAAGAAAGGATGGCAAAGAGCACTGGCTGTAGTCTGTGACTTCAAGCTCTTTCTGTACGATATTGCCGAAGGAAAGGCATCTCAGCCCAGTGTTGTAGTCAGTCAAGTGATTGACATGAGGGATGAAGAATTTTCTGTGAGTTCAGTCTTGGCTTCTGATGTTATTCATGCAAGTCGAAAAGATATACCCTGTATATTTAGAGTCACAGCTTCCCAGCTCTCAGCATCTAGTAACAAATGTTCCATCCTGATGCTAGCTGATAGTGAAAATGAGAAGAGTAAGTGGGTGGGAGTACTGAGTGAATTGCACAAGATTTTGAAGAAAAACAAATTCAGAGACCGCTCAGTCTATGTTCCCAAAGAGGCTTATGACAGCACTCTGCCCCTCATTAAAACAACCCAGGCAGCTGCAATCATAGATCATGAAAGAATAGCTTTGGGGAATGAAGAAGGGTTATTTGTTGTGCATGTCACCAAAGATGAAATTATTAGAGTTGGTGACAATAAGAAGATTCATCAGATAGAACTCATTCCAAATGATCAACTTGTTGCCGTGATCTCAGGACGAAATCGACACGTCCGACTTTTTCCTATGTCAGCTCTGGACGGGCGAGAGACTGATTTTTATAAGCTGGCAGAAACTAAAGGCTGTCAAACAATAACTTCTGGAAAAGTGCGTCATGGAGCTCTTACATGCTTGTGTGTGGCTATGAAAAGGCAGGTCCTCTGTTATGAACTATTTCAGAGCAAGACGCGTCACAGAAAATTTAAGGAAATTCAAGTCCCATACAACGTCCAGTGGATGGCAATCTTCAGTGAGCAACTCTGTGTGGGATTCCAGTCTGGATTTCTAAGATATCCCCTGAATGGAGAAGGAAGTCCATACAGTATGCTCCATTCAAATGACAATACACTCTCATTTATTGCACATCAACCAATGGATGCCATCTGTGCGGTTGAAATCTCCAGTAAAGAATACCTGCTGTGTTTTAACAGCATTGGAATATACACTGACTGCCAGGGCCGAAGATCTAGACAACAGGAACTGATGTGGCCAGCGAATCCTTCCTCTTGTTGTTACAATGCACCGTATCTCTCAGTGTACAGTGAAAATGCAGTTGACATCTTTGATGTGAACTCCATGGAATGGATTCAGACTCTCCCACTCAAAAAGGTTCGCCCCTTAAACAGTGAAGGATCATTAAATCTTTTAGGCTTGGAGACGATTAGATTGATATATTTCAAAAATAAAATGGCAGAAGGGGATGAACTGGTAGTTCCTGAAACATCAGATAATAGTCGGAAGCAAATGGTTAGAAATATTAACAATAAGAGGCGTTACTCTTTCAGAGTTCCGGAAGAGGAAAGAATGCAACAGAGGAGGGAGATGTTACGAGATCCAGAAATGAGAAATAAGTTAATTTCTAACCCAACTAATTTTAACCACATAGCACATATGGGTCCAGGAGATGGAATACAGATCCTAAAAGACCTGCCCATGAACCCTCGGCCTCAGGAAAGTCGGACAGCATTCAGTGGCTCCGTCAGTATTCCGTCTATCACCAAATCCCGCCCTGAACCCGGTCGCTCCATGAGCGCCAGCAGTGGCCTATCAGCAAGGTCATCTGCACAGAATGGCAGTGCGTTAAAGAGAGAATTCTCTGGAGGCAGCTACAGTGCAAAGCGGCAGCCCATGCCCTCCCCATCGGAGGGCTCGCTGTCTTCGGGAGGCATGGACCAGGGAAGTGACGCCCCAGCACGGGACTATGACGGAGAGGACTCTGATTCTCCGCGGCATTCCACGGCTTCTAACAGTTCCAACCTGAGCAGTCCTCCCAGCCCAGTGTCGCCCCGGAAGACCAAGAGCCTATCTCTGGAGAGCACAGACCGCGGGAGCTGGGACCCGTGAGCGGGAGCTGGGACCGTGAGCAGCCTCCGCGCTCAGACACTCTGGGCTCCCCTCCACTGCCCCCCTCCTCTCACTGTCATCTCTTCCCCAACCTCTGCCTGAAGATGCCAGGGCCGACTGCAGTAGCAGGGCTGGGGTTCGGGAATTCTGCCTCTAGGACTTTCATCCACGCCCGCTTCGACTTAACAGCAACAACTATAAAGGCAGACTTTCATTGAGCAGCTTAGATGAATACTGATTTCATTTCATACACTTAGCGTTGCTTTCTATTTCACCCTTCCCCTAAAAAGGTAGCTTAAGTAGACAGATTCCACACATGTAAGTGATAAGAATAAGATTAGACAGACATTGTTTTCACAGTAGAGTCTCATGTAGCCCTGAGACAGCACGTGGGGCTCGCCAGTGGGTCCCGGGCGCGCGCCAAGCCCCTTCAGCACCACAGTGAATGTCGACCTGATCGTTGCCAGTAAATCCCTTATCACTAAAACAATGCATATTTTACTACAAAACAGAGTTTAAATAAATACACAAATGTAGAGGTTAAGTACTGAATGTATATAGTAAAAGGAAGCATCTTGTATTCAACAAAAAAATGGATGCGTATATGAGAGATCATTTAATTTAAAGAACTGTGTTATTTCCTGTCTGTTTTCCACCTAAAAAATGAAAGGGTAGAAAGGCCTGGCACTGACGTGTAAAGAGGGAGGGCGGGAGGAGCAAGCATCCCCTTACCGCCAGCTCTCACGCTGGGTGGGGGAACCTGCGTCTCTCACACTGGACGCGGCACCTGCGAGCTTTAGGAGATGCTCCGAGGCTTTGGTTTCATCGGTTTGGAGTGTAAACTGGGAACCAGACTTGTAACATTTAAAGCCTCTTCAGCAGCATCATTAAAAGGCAGATTTACTTCTATCCAAGACATTTCTATTTCTAGCAGTAGAATTTGAACCACACTTCTCATCTGTTATTATATTTTGGTATCTTCTGCAGATGAATGTAGAAACGCAGTTTTGTCACCTTCTGGATCCCTTCCATCTGAAAGGACACAAGGAATGGCCATAAACAGGTTCAGCAGAGTGCTTTTTTCCCTTGGCTGGTCTGCTCCCCCCTTGCAGTGAGGCCTATGCCCCCAGCTGAGCCAGCTTCTCTTCAGAGAGGGAGCTGTTTTGAGGGGGTGTCAGCATCCTCAGATAAGCCTGGGAAAGGGGGTTAATTACCAAATAATGTAAAACCTCAAAGGCAAGGACTTGAACAGCCTTAACCAAATACTCTTTCCCACACGGAGTAGGAAGCGGACAGCTCATCCCTGCCGCACACAGGAAGTCAGCCCGGCGTGGCCTTCCTGAGCGGGTAAGCTTTGCCTCCCTCCTAGCTATATTGTGTTAGTCCCATATCCATTTGGATTCCTGCTGTTTTAATTGCCATAAGGAAAGAGATGCAGAATCAGGAATTTCTTTCTCCAGAGTCATTTCACCAGTTAAGCACATGAGTAGAGAAAGATAGAAATAAAAATATCTGACGGTCATATAGAGAATCTGCCTCTCTTTTACTTTTTATCTAAATTTCCCTGAGAAGTACCAGCAGATTTTCTGCTGTCTTTAAAATTCAGCTGAAATAGAAGACCGTTCCTGCCATTGCTTGTCCGCATCTTGGTGTGTAAGCACTGTCGTCTTACCCGCCCACCACCACCTGCACACGCGCGCACACACACACACCCGCCACAGCTCTTCCGCTTCCCACCGCAGGCCACAGGGAGCTGGACTGTTCCCAGAGGATGCCACTCTCAGGAGCAGGTCACTGAGTTCAGGGAGGGAAGAAAGGGTCCTGTGTGGGCATTATATTGTGAAATATTACAGTAGAGAATTTTAAAATAATAACAGGTTTGGCATTTAAACATCCTGAACTTGGCGCTTGCTCAGATTTATGTTTAACTTGGATGGGCATAAATGACTGCACAATTCTAACCTTCTAAATCCTTTGCTTTTGGAAGAGAAGTGTTAGGTGGAAATACTTTTGTGCGTTTAGATTTCAAGAGTCGGACGTTGAGTCTGGTTACTGCCATGACTCCAGTCACTCCTTACGTTTGGCACTTCCCAGGAGGAGACGGAACCTGCCAGCCGGCTGCTGAGCGTCTGTGGCCCGCTCCCCTTCAGACCCTCCCACCCTCTTCTTTCCTTTCCCCTCACCTCTTCCTGCCCGCCTTTTCTCCTCTGAGCAGAGGCAGATCCAGCTGAGATTCACTGGACTCCACACTAAGCCATTAGTTTATAGCTTTGACAACTAAGTTTCTGTTGCCTATAGGTGCTTATTTCTTTCAGATGCTTTTAGGATCAAAATAATAACCATACCTGAAGTCTGGTCACCAGTATAGTGAGTCATACCCTGTAGCCCCCCAACAGGGCAGATAAGGGCTTGTCCTGGCTGTCGGGCTCACTGGGAAGTGTAATACTAACCCAGTAGATTATACTCCAGTAATCTGAAATGGTCTTAGCAGTAGCAAAAGAGCAGTCCCAAATGTGATTCATATTCAATAGGAGGAGCCTTGGGGGAGAAACACTGCCAAGGGTGGTAATCTGGGAGGTATTTTCCCAAGATAGTGATCATTCAACTGGGTTTATCCCCATTCTCCAATATGAAGCAGTTACCTTCAGAAGCTTCTTGAAAAGAATGATTTGGGAAATGGGGAATGGATTCTAGAGAAACAAAAAACAGTGTCACTGAAATGGATCAGTAACAAAGATTACGGAACAGATGTGATGTTGCTGTCTGAATTCATCCTTTGTTTTCATGCAGGACATTCAAAGAAACGTATGTGGAAGCAGGAACTTATTTCTCAGTAGAAAGGAAAAATAAGAGGCATTTCTGGCGCAGTCTAGATATGTTGATATTTGGTGCTATCTATATTCAGCCAATTTGTTGTCTACTCTTGAATTCTACTTTAATCTTGCTATGTGCTTTGGGTGTATAAAATTACATATATACATATCACACACACACATATATATATATATATATATTTCTTTTTGCCAAAAACAGACGCCTTCCTCGTCAAATGATGCTGAAGCAACTTTTTTAGTTATGTGTCTGCACACACACCCACACTTAGAGATTTCATCTGCTTTCTGAAGGAGCATAGTTTTAAGGCTGTGAAACACAACTAAAAAGGGCCCATCTATTTCATTTTCCAAGCAGAGCTTGTACCCAAGCTTCAGGGAAGAATCTGAAATCCCTGTTTTGTTTACAGCAACAATCTGTCATTCCCCAGCTGGTTCTCAGCCTCCCTCTGCCTTTCATATGGTTAGAGTCATGTCATTTTGTTTCTTAGTGGCCACATCTACTTCTGTGAAAGACCAGTTGCATTTCTACAGACTCTCAGGTATCGTTAAAGAAAAGCCAGAGTAGAGGTGGGCAGACATCCCTGACCCCCCAGGTAGAACAGGGCTGTTTAGTGGCCTTTGTCACAAGCTCTGTGTTCTCCCAGCTTAGCGGAGCCATCAAGCTCAGCATCCGCTCTCTGGACAGAGGGGCGTTCTCAGCAGCGGCCAGGCCTCACCACTGCCCCAGTCTGCTGGGCACAATTGGGAAGTGACTGGGCCCCCCACTCCCCTCCTCTCGCTGGCCCAGCCCCTGTATTCATTAGATAAGCCACATGGCATTTCACTGGGCCCATCTTAAAAACCTCTTTCCCTGTTATGACTTCATTATGACAAGTCCAGCGTTCTCTGCAGAGCCCTGCTCCTAAGGGGCCCTCGCTTCAGCTGGAGCTCTGCCTCAAGTCTCAGCGCTGGTCGGCAGGCCGGGCGCTCCTCTCCCTTCACAGGGACGACCGTTACACACACAAACCATTTCATTTATGGGGGGAAATTGATGAAAACAAATCAGCCTTGAAATTTCATGAAAACAAAATAACCTGCCTTTTTATTTGATAGTGTAATATCATTTATTTTATAAATTTTTTAGGGTTTTTTTCTCATTGTAATATTATTGTACAGTTTTGCATGGCCTGGGTGTAATCATTTTTTTGTTTAGAATATAATGCTGACAAATAAGTGTGTATGGAAGGGGAAAAGATAACTGCTTTGGCCTCTGATCACTCTTTATTTTGTTTGGTTTTACCCCCTCAGTGTCTTAGGGAACTTTATAAGGAGATTCTCTGCTACCAAACAATGGTGTGGATTCTTTTGCACAGAAATATTTAAGGTGGGACAGTCAAAAATGTAACAAGACTTCTCACCGATATTTTATGTTGGTATCACTTAATATTAACCAGACTCTGATGTATTGCAATAAAACAGGGAACTGTTAGA EMBV3_24714 ACAGAATCAGAACCTCTGCCAGCAAAGACGGCACAACTTCCCGAAGAGCCTGCCCAGTTT Gene BVT0102_192528 + 1 EMBV3_39667 GK000018.2:43432929-43435069 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083289 TCONS_00083287 TCONS_00083294 TCONS_00086247 TCONS_00083298 TCONS_00083286 TCONS_00083297 TCONS_00083290 TCONS_00083296 TCONS_00083288 TCONS_00083299 TCONS_00083292 TCONS_00083295 TCONS_00083293 2 XLOC_051222 XLOC_052095 Coding TCONS_00083295 XLOC_051222 Coding Coding TDRD12 18:43361955-43435007 j TSS62628 6705 1 TCONS_00083295_8 1294 0.0420581655480984 32 0.908652858961547 2.25939153777181e-12 0.000113970853819251 7.09862686293535e-08 1.03576131976073e-20 0.000125739564511873 2.76373255674315e-05 0.000111043059171661 5.72851546896735e-14 8.15189761966015e-05 1.6320099041202e-18 7.81100709076847e-13 1.29456456190696e-05 1.00421829910754e-10 1.26799734157176e-09 9.27589908463941e-26 9.49776591597064e-41 0.000248940302331204 8.51107243375039e-12 7.18552715101221e-07 0.000214219015450983 2.55058713241205e-05 1.64148029182057e-11 3.33008710344212e-05 4.43324853186534e-05 0.000144481832669264 7.80270954478108e-17 4.64818481449088e-05 5.80888919590415e-06 1.91294435868116e-13 6.88273676130549e-13 XM_002694999.2 TDRD12 PREDICTED: Bos taurus tudor domain containing 12 (TDRD12), mRNA. 0.0 1.105e+04 99.61 0.917375093214019 XM_005275844.1 LOC101929327 PREDICTED: Homo sapiens tudor domain-containing protein 12-like (LOC101929327), mRNA. 0.0 1948 85.61 0.251304996271439 TCONS_00083295_8 sp|Q587J7|TDR12_HUMAN TDR12_HUMAN Tudor domain-containing protein 12; 0.0 1924 80.69 0.870942812982998 2 coding 0 0 0 0 -0.0802108726548669 0.579726950481777 -0.0227646896650462 0.620253702767268 ATGGCGATTGAAGATCCAGGTTGCTTCTGGGTTGTTATAAAAGGGTGTAGTCCCTTTTTAGATCATGAAGTTGACTATCAAAAACTAAATAGTGCCATGAATGACTTCTATAACAGCCTGTGTCAAGATATAGAAATAAAACCACTGAAGTTGGAAGAAGGGCAGGTTTGTGTGGTTTATTGTCAGGAACTAAAGTGCTGGTGCAGGGCAGTTATTAAGTCAATCGTGTCTTCAGCAGACCATTACCTCGCAGAGTGTTTCCTTGTGGATTTTGCCAGATACATTCCAGTGAAATCCAGAAACATCCGAGTTGCCATAGAAACTTTTATGCAGCTTCCCTACAGAGCAAAAAAATTCAGACTGTACTGCACAAAACCTGTCACATTGCACATTAACTTCTGTGAAGACAGTGCTGAAATTGTACGGGCCAAGAAGTGGGACAGTGCAGCTATTCAGTACTTCCAGAACATCCTGAAAGCGACTACCCAGGTAGAAGCCAAATTGTGTGCTGTGGAAGAAGATACTTTTGAGGTTTACCTTTATGTAACTCTGAAAAATGAAAAGGTTTGTGTTAACGATGATCTGGTTGCAAAGAACTTCGCTTGTTATGTGTCACCCATGGAGAATAAAAACTTTGATTCTTTGGAGAAGCCAAGATTGAATATAAAGTCAGCATCCTTTTCCAGTAAGCTCAATCCAGCACTTACTCTTTGGCCAATGTTTTTGCAAGGAAAGGATTCTCAAAGGATGGAAACAAAGTCTCTCAAGCATCCGTGGCCCCAGGGTGCAGGTGACTTCAGGCCAACCAGTAGGCTCCTGGAGAAGACTGTAAAATGTAATATGGATTCATTGAAAGGTTCACCTAAAAAAGAATCTGAAAAGAAACAACAGTACATCTCCTTGAAAGATGTAAATAAGTGTGTTGAATCTTCAGTGTGCTGGCCAACAAAGAGAGGCATAACCATATATGCCAATCCAGACACACCAGCTGCAAGTGCTTCATGTCAGAAGTCAAGTGAGAAGCCACTTAGATCAGCTGAGAAGAAAGAATACAATGAGAAGAATGGCTGTGTGAAATTACTGCAGTTTTTAAATCCTGATCCTTTGAGAGCTGATGGAATCTCTGATTTACAGCAGTTGCAGAAGCTGAAGTCGGGGTCCCGGCAGCCCATGGCAGTTTTGCGAAACAAGATTGAGCCCTGCTTGTCCATCGAGACAGCACCACTCTCAACAGACCTGAAAAAGGCTCTTCAGAGAAATAAGTTTCCAGGCCCCAGCCACACTGAGTCTTACTCCTGGCCTCCCATAGCGCGGGGCTGCGACGTGGTGGTCATTTCTCACTGCGGAAATGACCCTTCGTTGTACCTCCCACCAGTGCTCACGATTCTGCAAACCGGGGGCTGCTACAAGTCGTTGCCAAGTAGGAACGGACCTCTGGCAGTCATCGTGTGCCCTGGGTGGAAAAAGGCCCAATTTATTTTTGAATTATTGGGAGACTATAGCGCGTCCTGCAGACCTCTTCATCCTGTGTTGTTAACAATCGGACTGCACAAAGATGAAGCCAAAAATATGAAGCTTCCAAGGGGATGCAATGTGGTTGTCACAACACCACATAGTCTCCTGAGACTTCTCCAGTATCAAAGCTTATTGTTTCTTAGACTCTGTCACCTACTTTTGGATGAGGTGGAAGTGTTACTGTCTGAGGCTAATGAGCAAATGTTTGCTATATTAGATAACTTTAAAAAACACATGGAAGTTGAAGAAAGGGAATCTGCCCCACATCAGATTGTTGCAGTTGGAGTTCACTGGAACAGACATATAGAGCATTTAATCAAAGAGTTCATGAACGACCCCTACATTGTGATCACGGCCATGGAAGAGGCTGCCCTCTATGGCTGCGTCCAACAGGTCGTACATCTTTGCTTGGAATGTGAAAAAACTTCTACTTTACTCCAGACTCTTGACTTCACCCCAAGCCAGGCACAGAAGACCTTGATCTTCACCTGTTCCGCAGCTGAGACAGAAACAGTGTGTAAGGTGGTAGAAAGCAATTCCATATTTTGCTTGAAAATGCATAAAGAAATGATTTTTAATTTAAAAAGTGTTTCACAACAATGGAAGAAGAAGTTAAGTTCTGGTTCTCACATTGTATTAGCCCTCACAGATGACTGCATCCCACTCCTGGCCATCACCGACGCCACGTGTATCATTCACTTCAGTTTTCCTTCCTCTCCAAAAGTCTTCGGTGGACGCCTATATTGCATGTCCGATCATTTTCAGAGTTTAACTGAACAGGGTTCTGCAGAACAGGGAGATAAAAAGACCAAATCTGTCTTGCTGCTGTCGGAGAGAAATGCCTGCCACGCAGTTGGTGTCCTGCGCTACTTGGAGCGAGCAGATGCCAAGATCCCGTCAGAGCTGTACGAGTTTACGGCGGGGGTTCTGGAAGCCAAAGAAGATGGAAAAGTCAGAAGGCCTCTTTGTCCGTATCTTAAGGCTTTTGGTTTTTGCAAAGACAGAAGGATCTGTCCTGACCGGCACCGTGTTAATCCAGAAGTAGACATACCAAGGAAGTTATCCAGCCAAACTCTACCGGTGCTTGGATACATAAAAATAATACCCTTTTATGTTTTGAATGCAACAAATTACTTTGGTCGTATAGTTGATAAACATGAGGATCTTTGTGCAACTCTTAATGCTGAGATGAAAGAGTATTTTGAAGACTCCAGTAATAAAGCAACTGTTGAAAAGATAGAGAAATTTGGATTATATGGGTTAGCAGAAAAATCAGTTTTTCACAGGGTTCAGGTGTTGGAGATGCGCCAGAAGGAGGACACGTGGGCCCTGGATCATGTCCTTGTGAAATTCATAGATGAAGGCAGGACTGGACTCGTCACAAGAGACCAGTTGCTGCACCTCCCAGAGAGTTTCCACACACTGCCCCCGCAAGCTGTGGAGTTTATCGTTTGTAGAGTGAAACCCGCGGACAATGAAATTGAATGGAATCCAAAGGTTACTAGGTACATTCATCATAAAATCATTGGAAAACTGCATGATGCAAAAGTGATACTGGCTTTAGGAGATACAGTTTGGATTGATCCAATGGTGCACATTACAAAACTTTCAAACTTGAAAACTTCTGTCATTGATTATAATGTTCGAGCTGAAATTTTGTCAATGGGAATGGGCATTGATAACTCAGAACATGTAGAACAACTGAAAAAATTATACAAAGGAGCTAAAATGCCATCTTTTGAAGAAAGCCTGAACCAGACCCTGGTACCTTCTTCCAGAGAAGACAGTGCTTGTCTGCCGAGCACACAGCAAGAGGACAAGGGCTCAGAGAGAGGAACTGACACCAAGACAAACTCAGAAAACCAAAAGCATGAAACTTTACCTAAAAACACTGGAGGTGCTTCCATTAACAAAACTGCAGAGCCGCCGAAAAGCTTCCACCCACAAATAAAATGGTTCCAAAAAGAGGATGTGGTCATACTGAAGATAAAAATAAGGAACGTAAAAGATTATAAATGTAAATACTTTAGAGATAGAGTTGTTTTCAGTGCCTGGGTAGGAGAGAAATTTTACTTGGCTGATTTGGAGCTACAAGCCAACATAATAAAAGATGATTGCAAATGCATAATTAAATATGACGAACCTGTAATCACTCTTGTAAAAGAGCAAAGGGAGTCTTGGTGTGGCTTACTCAAACAGAGGAATCCCAATGTGGCTTTTGATTTTGATCACTGGGAAGACTGTGATGAGGATAAGGAGGATAGCCACTTTGCCAAAGTTGTAAACTCTAAAAACCTGTCCTGCAATGTGGCAGGCTTGGTTGAGACCAGTGACAAAAGTTCGGATGAAGATGAAAGTGAGAGTGAATGAGAATGTGAATTAAACCCTGCAGAGCGGCCAGAGGCTTCTGAACAGAAATGGATATTGCTGTGTGACCAGAGCTAAGAAGACAGGCAGTCACATTCAGACCATTTTTCCCTCAAGGATCAAGCGTTACTAAGTGTCACCTTGCGGCACTGGGATTAGTAATGGTGAGAAATTCTTAATTGATAGAAACACGAGTTGATGATGAGACTCTGGAAGGAAGGTGGAAGCAGAGACACTGTGAGTGCTGGGCTGTCCTGCTGGCCACCTGCTGTGAAGCCTGCCTTGACTCTCAGGTTGAGTGATGCAAGCCAGGCGTTCAGGTAACGAACTGTACCACCTGAGTTCACTGTTGTTGTCTTTTCATCTAGACCTGTGTTTGGTACATTCTTAAAACCTGAGCTTGCACATATAAATTGAGATTTCTTAAAATTCATACTCTGCACTGCTTAAGAAACCTTTTCAACGGCTTCCCTGGTAGCTCAGATAGTTAAGAATCTGCCTGCAGTGCAGGAGACCTGGGTTTGATCTCTGGGTCGGGAAGATCCCCTGGAGAAGGAATTGGCAACCCACTCCAGTATTCTTGCCTTAGTTCCATGGGCAGAGGACCCTGGCAGGCTACAGTCCATGGGGTCGCAAAGAGTCAGACATGACTGAGCAACTAACGCTTGACTTCACTTTCAGCCATGAGTTAGTTGGCATTCAGCATAACTGTGTGTGTGCTAATGCTCCTCGTAGTCTTTGCATAGCGATAGCTGATTGGCCAGGCTAAGCTGACATCTTGCAAAGAGACAGTCCAAGGGTGAGAATGGGCTTGCCTCAGCAATAGCAGCCTGAGCCAGGGCCTTCTGGAGGTAAAGCTTCTGAAGTACCCTCGGAACCTGCAGCGTCTGGGACAGACAGGACACAGGTCTCTCTCCAGTGGAAACTGAAGAGGACTTGTGCGTGGAGGTAACGCTCAGAATACCTGCTCATGGTGAGCCCTGCACACATTCATGGCCTCAGCCTGCGGCGAAGCTGCAGCACCCGCAGTCATGAGGTCATCAGGAAATGTGCATTTGTCATGAGCACTTCAATGTGGGACTGCCCAGAGCCTGGCTCTCCATGTTACCCGGAAAGTTAGACGGCGAGCCGCTGGCCAGTTCACACCCTGTGCACTGCCTCAGTGTGGGGCTGGCAGCTTTGCCTAGAACTGGAAAATAACACGGTAGAACATGACTGTTAGGACAGCCCCCCGAGTCTTTATTCTGTTTTACACATCAGAAAGCACAGGGGCTCACGTTTGTATGTGTCCCAGGTATGGAGCACCACCTGAACAGGAGTAAACTTTGTCTTCAAGCTGTCGTGCCCCGTGAGCAGGCACGAACCGTCCTCTTGCTCTCAGTTTCCTCATCTGTAAAATAAGACAGTCTGCTTCTTGGTGGCCATTGCCCAGCAGTGGGGCCTGGCGTGCTGCTGGGTGGAGTCATGCTGCTGCCCTCTGGGGGGCGGACATGGTGTCCAGCCTGGACAGCTGCCAGGATCGCATCCTTGCTGCCGCTGTGAGCCCGTGGTTGACCGGCAGGTGTCCGATTGGCATGTGAAGTGTACCAGCGGTCCTTTTTTCCCGGCTAAACTGGGCAGGCTCTTCGGGAAGTTGTGCTGTCTTTGCTGGCAGAGGTTCTGATTCTGTGCAGCTCTTGTAACGTTCTTATCCCATTTTGGTAAATACAGCTTTCGCTCCCACCGGGGAGGCCTTTGGGTCGGTGGCCAGGCCTCCTGAGCTGCACTGGCTTTTCCCCTGAGGTTGTTGGCCACCTGCAGTGTATGCGCCAGTGTATAGTCTCTTTCATAAAACACAACACATGATAATAGCAAGCAGCAGAGCTGCACAGGTGTGTGCCCAGGTCAAGTGAAGGGGTTTCCTGTTCTCAGAGAAGATGTAACATTGGTTCTCTCGTGTGGTTCACTAACAGCTGAGTGAAAGTATTGGGCAGAGGATGGCTACATGTTTAAATTTCAATTTCTTTTTTCAGACATTTAAATTTATGACTATTTGAAGTTCTGAATTATGTTCTGTAAGATACAGGAGTACTGGCTTGTGAGATGTAAACAATTACTCACTGTTTTTTGTTGTTGTTGTTCTCTATTATTATATGTACTGATTTCATGTTTTGGGAAATTTTTTGAAATGCATGGTAAAAGTACCTTTGCATGCTTCTAAAATTGCTCATGTTCTTAGTTTTGGTGTGAAAGTCTTTTGCAATATATCAATAAAATTTCAGTGTTTTCACGGAAATGTTACTTTTCCCATTCTTTTAGACCATATTTTGTCAGGAATATTCCTGAGTGCCAAATGCAATAGAATTTTATACAGCATACGTCCTGGCTTGACTAAAATACCAGTGAAGGTTGTCAGGGGACCTGTGATGCTGAGCTTCTGTGGACACAGGCTGCAGGTGGTCCTGGGCAGTCAGCTGTGCCCTGAAGGCCTTGACAGCCAGCCTGGGACGGACCTGCCCCCTGCGCCCCCGGTGAAAGACAGGAAGGGGTGGGGCGGGTAGGAAAGCACTCGTACTTGAGTATTTTAAAAATCTATTTCAATCAAAGCAAAGTTCCATCAATTTTATATTTAAATGTATATATGTGTGTGTGTGTATATACACATATACGTGTGTGTGTGTGTATACATATATGTACCCTTCTGATGATGGAGCTGAAAGAACACCCTTTACTGAAGTAGGTGTGACGTGCCCCTTGCTAGAGTCGCTGTGTGGTGCCCGTGGCTCTGGTTTAGTCCTTCCCGCCACCACCGTCCTTCTGGGTTATGTCCTTGCCTGCTGGTTT EMBV3_13617 AGCCCCTGACATCCATGTTAATCATAGCTCTTCCCCGAACTGTTGCCAAATGGAGCGAAG Gene BVT0102_055693 + 0 NULL GK000017.2:54604988-54716440 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30007 TCCAAGACCTGCTTTCACTACCTGGGGGAATTTGGAGAAGACCAGATCTATGAAGCCCAC Gene GeneID:510480|PACAP:NM_001098930:220_cdna Constitutive 0 NULL GeneID:510480 7 GENE PACAP MGC159584 Proapoptotic caspase adapter protein EMBV3_38274 ACACTGAAAGCTCGGTGCAACAGCCCTGACGGCGAGAGAGATGCGATGCCCTGAGTCTCT Gene GeneID:100297694|LOC100297694:XM_002692188:75_cdna Constitutive 0 NULL GeneID:100297694 13 GENE LOC100297694 NULL hypothetical protein LOC100297694 EMBV3_25138 ATCAGCGGAACTCCACCTACAACGGGGACATCAGGGAGACCAGGACAGACCAAGAGAATA Gene GeneID:282091|PPP1R16B:NM_174824:742_cdna UTR3_Alt 2 NULL GeneID:282091 13 GENE PPP1R16B TIMAP protein phosphatase 1, regulatory (inhibitor) subunit 16B EMBV3_40448 CAGCTGCTCGGGCGTGTGAAAGTGGAGTGTGGTCTTGATGTGACCAGGATATTTGATTGC Gene BVT0102_059731 + 0 NULL GK000023.2:28192983-28202777 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134671 TCONS_00134669 1 XLOC_081480 Coding TCONS_00134669 XLOC_081480 Coding Coding ABCF1 23:28198591-28210958 j TSS100329 3024 1 TCONS_00134669_5 746 25 0.757480187611192 0.010668928729398 0.00839904790512086 0.00943178183859827 0.00842874753230605 0.00566313776305775 0.00282147787215878 0.00385395743607825 0.00574000505829023 0.00688282848312094 0.00530386813908745 0.00202425437975084 0.00189853391360106 0.0019017474655679 0.00493938624692291 0.00234534522989293 0.0323939597368004 0.0105566644334645 0.0185321192154693 0.00899657339888569 0.0080862174601688 0.00297898252768178 0.0152964039658001 0.0134123495957932 0.00905090254687611 0.0117112622523897 0.0079351305032574 0.00416392786044284 0.00384411672896587 0.00421134863814096 0.00841572141634075 NM_001206909.1 GCN20 Bos taurus ATP-binding cassette, sub-family F (GCN20), member 1 0.0 5416 100.00 0.992724867724868 XM_005248954.1 GCN20 PREDICTED: Homo sapiens ATP-binding cassette, sub-family F (GCN20), 0.0 3609 85.85 0.99239417989418 TCONS_00134669_5 sp|Q8NE71|ABCF1_HUMAN ABCF1_HUMAN ATP-binding cassette sub-family F member 1; 0.0 1262 96.00 0.998659517426273 10 coding 0 0 0 0 -0.147829466684281 0.387113928123224 -0.0127316210721653 0.831159030302576 AATTGACCTGCCGATCCAGGAGACAAAGTGGTGAAGAAAGGGAAGAAGGACAAGAAGACCAAAAAGACGTTCTTCGAGGAGCTGGCAGTAGAAGACAAACAGGCTGGGGAAGAAGAGAAAGTGCTCAAGGAGAAGGAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAAAAAGAAGCGAGACACCCGAAAAGGGAGGCGGAAAAAGGATGTGGATGATGATGGAGAGGAGAAGGAGCTCATGGAACGTCTTAAGAAGCTGTCAGTACCAGCCAGCGATGAGGAGGACGAGGTACCTGCCCCAGTACCCCGAGGAGGGAAGAAAACCAAGGGTGGTAATGTTTTTGCGGCCCTGATTCAGGATCAGAGTGAAGATGAGGAGGAAGAGGAGGAAAAACATCCTCCTAAGCCGGCCAAGCCAGAGAAGAATCGGATCAATAAGGCTGTATCTCAGGAACAACAGCCAGGGTTGAAGGGCAAAAAGACAAAGGAGGAGAAGTCAAAGGGGAAGGCCAAGCCTCAAAATAAATTTGCTGCTCTGGAGAGTGAAGAGGAGGAGGAGGATGAAGAGGAAGTAACAAAAGAAAAGGAACCGCCCAAGCAAGGGAAGGAGAAGGCCAAGAAGGCAGAGCAGGGCTCAGAGGAAGGAGAAGAGGAGGAGGAAGAAGGGGAGTCCAAAGCTGATGACCCCTATGCTCACCTTAGCAAGAAGGAGAAGAAGAAACTCAAGAAACAAATGGAGTATGAGCGCCAGGTGGCTTCGTTAAAAGCAGCCAATGCTGCTGAAAATGACTTCTCTGTGTCACAAGCAGAGGTGTCTTCCCGCCAGGCCATGCTAGAAAATGCCTCTGACATCAAGCTGGAGAAGTTCAGCATCTCGGCCCACGGCAAGGAGCTGTTCGTCAATGCAGACCTGTACATCGTCGCCGGCCGCCGCTACGGGCTGGTGGGACCCAATGGCAAGGGCAAGACCACTCTCCTCAAGCACATCGCCAACCGAGCCCTGAGCATCCCTCCCAACATCGACGTGCTGCTGTGCGAGCAGGAGGTGGTAGCTGACGAGACGCCAGCCGTGCAGGCTGTCCTTCGAGCGGACACCAAGCGCTTGAAGCTGCTGGAAGAGGAGCGGCGGCTTCAGGGACAGCTGGAGCAGGGCGACGACACGGCTGCTGAGAGGCTCGAGAAGGTGTACGAGGAATTGCGGGCCACCGGGGCGGCAGCTGCAGAGGCCAAAGCCCGCCGGATCCTGGCTGGCCTGGGCTTTGACCCTGAGATGCAAAATCGACCCACACAGAAGTTCTCGGGGGGCTGGCGCATGCGTGTCTCCTTGGCCAGGGCACTGTTCATGGAGCCCACGCTGCTGATGTTGGACGAGCCCACCAACCACCTGGACCTCAACGCTGTCATCTGGCTCAACAACTACCTCCAGGGCTGGCGGAAGACGCTGCTTATCGTCTCCCACGACCAGGGCTTCCTGGATGACGTGTGTACTGACATCATCCATCTTGACGCCCAGCGGCTTCACTACTACAGGGGCAATTACATGACCTTCAAGAAGATGTACCAGCAAAAGCAGAAGGAACTGCTGAAGCAATATGAGAAGCAGGAGAAAAAGCTGAAGGAGCTAAAGGCGGGTGGCAAGTCCACTAAGCAGGCGGAGAAGCAAACCAAGGAAGCCTTGACTCGAAAGCAGCAGAAGTGCCGGCGGAAAAACCAGGATGAGGAGTCGCAGGAGGCCCCCGAGCTGCTGAAGCGCCCCAAGGAGTACACCGTGCGCTTCACGTTCCCCGACCCGCCGCCGCTCAGCCCTCCGGTGCTGGGCCTGCACGGTGTGACCTTTGGCTATGAGGGGCAGAAACCACTCTTTAAGAATCTGGATTTTGGCATTGACATGGACTCAAGGATCTGCATCGTGGGCCCTAACGGCGTGGGGAAGAGCACCCTGCTGCTGCTGCTGACAGGCAAGCTGACGCCGACTCGGGGTGAAATGAGGAAGAACCACCGGCTGAAAATTGGCTTCTTCAACCAGCAGTATGCAGAGCAGCTGCGCATGGAGGAGACGCCCACCGAGTACCTGCAGCGGGGCTTCAACCTGCCCTACCAGGATGCGCGAAAGTGTCTGGGCCGCTTCGGCCTGGAGAGCCACGCCCACACCATCCAGATCTGCAAGCTCTCTGGTGGACAGAAAGCCCGAGTTGTGTTTGCAGAGCTGGCCTGTCGGGAGCCCGATGTCCTCATCTTGGACGAGCCCACCAATAACCTGGACATCGAGTCTATCGACGCTCTAGGGGAGGCCATCAACGAATACAAGGGTGCTGTGATCGTCGTCAGCCACGATGCCCGACTCATCACAGAAACCAACTGCCAGCTGTGGGTGGTGGAGGAGCAGAGTGTTAGCCAGATTGACGGTGACTTCGAAGACTACAAGCGGGAGGTGTTGGAGGCCCTGGGAGAAGTCATGGTCAGCCGGCCCCGAGAGTGAGCTTTCCTTCCTGGACATCCCCTGTCTCCTCTCCACTCGGAAGCTTGCTCTGGTCTGCAGCCGGAGTGGCAGCTGCTCGGGCGTGTGAAAGTGGAGTGTGGTCTTGATGTGACCAGGATATTTGATTGCTTCTTTTTCTCTGAATGACTCGTCCGTTCTGCTTCTCTTGAGATAACTGAGTGGTCCTTGTCCTTGAAGTCCCTCTGTACAGGCAGAGGTGACATTTGTCATCATGGGGTTCCATCCAGCCAGCTCACGCAGCCAGTTGTCTGAGCCTCTGTCCTCACCGGGAAGCCTGCCTCTGGGCCGCCCCAAGCTTCGGGTGCAGCTGCCGTGTGGTCTGAGTGGTGCTGCACTCCTCCGGTGGATTCAGTGCTGACCTAACGGATACCAACAGCTGCTGCTGCTCCTGCCACCCAGGATCTGGTGCCTGCAGTATCTGGTCTGATGGGGGACTTGGGGACAGGAAAGGAATGCTGCTGAACTTGAATCACCCTTTACAAGGGGAAGAAATAAAGGAAAGGAGTTGCCGCCGCC EMBV3_27763 ATGAACAAGGTCCTGTATAGCCAGTTAGCAACCTCCTGCTGGACTGGTGGTTTCCTCAAC Gene GeneID:785431|LOC785431:XM_002697389:45_cdna Constitutive 0 NULL GeneID:785431 23 GENE LOC785431 NULL similar to olfactory receptor Olr1730 EMBV3_07465 TGCGTTTTCAAGGGACGGAGAGAGGGAGGCCCAGCAGGTTCAAACTCGAACTCTTTTGTT Gene GeneID:789765|MNX1:XM_002686987:827_cdna Constitutive 0 NULL GeneID:789765 4 GENE MNX1 NULL motor neuron and pancreas homeobox 1 EMBV3_23758 AAAGTTAAATATTTTCTTAGAATTCATATAGATTGTGTTATTTTACTCAGTAGTCAATAA Gene GeneID:615240|SNRPF:XM_002687625:763_cdna Constitutive 0 NULL GeneID:615240 5 GENE SNRPF NULL small nuclear ribonucleoprotein polypeptide F EMBV3_01362 AACTGGTATAATGGACAGGCTGGGGCCAGATGAGTAAGCCCTGGGTAAGAAGAGGCTTGA Gene GeneID:784449|LOC784449:XM_002686154:285_cdna Constitutive 0 NULL GeneID:784449 3 GENE LOC784449 NULL similar to KIAA1324 EMBV3_23022 AGTTGGGATGGCAGACATTCTTCAACGTGTTCCAAGGGGGCAGATGAGTGTTGAAAACCC Gene BVV0102_258327 - 0 NULL GK000030.2:24110342-24387585 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40426 CCACGGCATCTGAGTCCCAGAGGAGACCCAAGGGCAGTACGTTCCTAAAAGGGGCTTGGA Gene BVV0102_229187 - 1 EMBV3_15684 GK000026.2:49743840-50472972 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17794 TAGACTGTTTCACTTCTACTTGCCAACACGGCTTGCAGGACTTAAGTGGAGATATCTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39969 GTGTAACATTTTGTATATTCTGGAGGTAGGGCAGCACCCCGGTAACTCACCAGACGTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00642 TCCACTTCCTGTGACCCGTTCTTCAGATGCTCAGGGTTCTGGTGGTTCCACAGTTCATCA Gene GeneID:519867|EPB41L4A:NM_001105384:12_cdna UTR3_Alt 2 NULL GeneID:519867 10 GENE EPB41L4A MGC160079 erythrocyte membrane protein band 4.1 like 4A EMBV3_09479 GAGCAGATGAAGGCTGAGACATTGGCTCTGAAGATGAAGCAAGTCATGGAAGACAAGAGG Gene GeneID:525484|UGT3A1:XM_002696379:98_cdna Constitutive 0 NULL GeneID:525484 20 GENE UGT3A1 UGT3A2 UDP glycosyltransferase 3 family, polypeptide A1 EMBV3_23541 CCTAGGGAGGTCTGGGGCGAACTTTCAGATTTCCTAGCCGAGAAACAGCGCTTCACATTT Gene BVV0102_401040 + 0 NULL GK000007.2:28718810-28790315 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22509 CACTTTGCTGCCCAGGTATGTATCTCTAGTTGGCCTGCAAGACACTTTTATTGATTCTTC Gene GeneID:512385|LHX8:XM_002686301:181_cdna Constitutive 2 NULL GeneID:512385 3 GENE LHX8 NULL LIM homeobox 8 EMBV3_09232 GTTTGCTGCCACTGCGGGGGCAAAACGAAGGTTGTCTTAGTCTTTGCTCTCAGCATTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14893 ACAGCTGGAGTCAGCTTTTGGGAGGAACCAGTACCCTGACATTTGGGCACGAGAAAGTCT Gene GeneID:282563|PROP1:NM_174678:8_cdna Constitutive 0 NULL GeneID:282563 7 GENE PROP1 NULL PROP paired-like homeobox 1 EMBV3_36830 AAACAGTTTTGCAGTGAGTCTGCTATGGGAGCCGAGAGAGGCAGCTGTCTTAGGTGGAGA Gene BVV0102_152190 + 0 NULL GK000023.2:47624207-47647211 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22894 CTCTGTCGCCGGCTGTGTCAGTGTGGACTTGAGGGATACGGCATGTTTCTAAGTGGATTT Gene GeneID:512854|MTA3:NM_001101964:95_cdna Constitutive 0 NULL GeneID:512854 11 GENE MTA3 MGC159528 metastasis associated 1 family, member 3 EMBV3_05107 TGGCCCTTGGCCGTCGTGGGTCTTGTGAACAGCTTCCAGAGAAAATCGCAGAGCAATAAA Gene GeneID:521650|ADPRHL2:NM_001035340:188_cdna Constitutive 0 NULL GeneID:521650 3 GENE ADPRHL2 MGC127480 ADP-ribosylhydrolase like 2 EMBV3_26132 CATTCAACCAGAGGGGGAGTGGGGATTTCTGAGAGAGAGCACACTTGTGGAGCTTGAATA Gene BVV0102_318581 + 0 NULL GK000027.2:4481034-4679599 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33066 CCTCTGGGAGTGGGAAAGAAAGCGAGGTCATGAGTCTTCCTGTGCCCATACTTGTCGAAT Gene GeneID:617118|DNAJC30:NM_001080917:308_cdna Constitutive 0 NULL GeneID:617118 25 GENE DNAJC30 WBSCR18 DnaJ (Hsp40) homolog, subfamily C, member 30 EMBV3_10708 TGGTTTCTGGGAATAAGATTTCTCAGGATAACTCTGAAGAGCCAACACAGCTTGACAGAG Gene BVT0102_332199 + 0 NULL GK000015.2:79636769-79660458 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00201266 TCONS_00132257 TCONS_00013240 TCONS_00013237 TCONS_00098385 TCONS_00187485 TCONS_00187309 TCONS_00226268 TCONS_00031871 TCONS_00107400 TCONS_00117782 TCONS_00221594 TCONS_00140493 TCONS_00135550 TCONS_00099833 TCONS_00088664 TCONS_00199297 TCONS_00071031 TCONS_00137852 TCONS_00025106 TCONS_00162452 TCONS_00025108 TCONS_00154252 TCONS_00252175 TCONS_00154251 TCONS_00010612 TCONS_00202431 24 XLOC_085141 XLOC_122914 XLOC_080738 XLOC_008038 XLOC_058631 XLOC_113530 XLOC_113357 XLOC_137960 XLOC_018116 XLOC_063310 XLOC_071948 XLOC_134908 XLOC_081773 XLOC_060076 XLOC_053450 XLOC_120950 XLOC_042804 XLOC_084061 XLOC_014669 XLOC_099333 XLOC_094012 XLOC_155116 XLOC_006163 XLOC_123974 Coding TCONS_00098385 XLOC_058631 NonCoding NonCoding - 19:5561093-5568721 - TSS72761 7628 6 TCONS_00098385_12 120 0.998820136339801 1 0 0.000472619384593992 0.000590112042379123 2.48698695252058e-05 6.19364967480683e-05 0.000262146668812916 8.23029148281041e-05 0.00017655106870438 0.000519719701354573 0.000316005689189621 0.00267620150743071 0.00246585130508771 0.00166543058682877 0.0010389308090448 0.001820917924053 0.00190811198114119 0.000274005677828412 4.6791762896366e-05 3.93696793448302e-05 0.000109342062985342 3.42928136903365e-05 7.04630609765089e-06 0.000202023784082533 0.000510413535597794 0.000290760511169636 0.000117659439792513 0.000218954540986896 0.000321718724345108 0.00197050180976411 0.00142749961532966 0.00144453398084447 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2349 88.75 0.234399580492921 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 9e-63 248 77.54 0.0431305715783954 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACTGGTCTATTGTATCATTTTAAGTTTGTGTTTTCTTGTTAATTTTCTGTTTAGTTGATCTATCCATAGGTGTGAGTAGGGTATTCAAGTCTTCCACTATTACTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATATTGCGGTGCTCCTGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGACCTTCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTTGTATGTGTCCCTTGTTTTGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCTTTGCCATTTACTTTATTGTTTTGGGTTCGAGTTTATACACCCTTTTTGTGTTTCCTGTCTAGAGAAGAGCCTTTAGCATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTAAAGCTTTTGACTTCTCCTTCATATTTGAATGAGATCTGTCATGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCGTGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGGAGAGAGAGAGAGTGAGAGAAAAGAGCGCACGCACGCGGGAGAGAGTCCGAGAGAAAGTGCTTTGGCTCCTCCTTTTATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAATGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTGTTCTACCTACCTAACATTCCCCCCTCAAGAGATGGGAGGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGGTGGCAAGGGATATTGGGCCTCCCCCTCTTTCTAGTCTCAAGCCTCAGAGTCCTTATAGCGGTGTCCAAGTGTGTGTGATATTTTCTGTGGTCAGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTAGTTGACCTGGGCAGAGACAAAACAAGTTAGACAATTGACAGTACATGGAATAATCATAAGCATCATCAATATAGCATAACAAGGACTAGTAGGGACATTCGTCAATTTTAAATTCACATTGCCAGGATAGCTCAAGTCCCTCCTTATTCAGGAATCAGAAGATCTATCTCCTGTCTGTCTTGGAGTACAGTCTCTGTCAAGCTGTGTTGGCTCCTTAGAGTTATCCTGAGAAATCTTATCCCCAGAAACCAGGTTTTGGGGGTGTTCATTAGAATGACATTCATTGGTAGTTCTGAATAGGTATCTGAGATCTCCCAGGGGCTCACAGGTGTATTGAGTGTCCTCTTCTGTTTTTTTCCATGGCTTGACTCGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCAGTAGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAGTTGAGCCTTTGGGGACCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCCTGGAGCATATAGTGGTGACTCTTTAGAATCTTTTGGGTCCTTGTTCATACCCCACAAGCGTATATCCTGTTGGAATTGCCCAATGGCCATGGTATAAGACTGGAGGGTCTGAATCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTCATAAGGACTAAGACCAATCTGTTCCTTAGGGGCAATGCGGGTGCAGAAGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATTGCTGATTTTAAGAATTGATTGGCTTTATACTTTTCCTGAAGATTGAGGCCTCCATGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACTCCTCGGGTGACCTTAGAAGTAAATGATGTCCCATTGTCATTTTGTAATGACCTGGGCAGCCTTAGCCTTCTCGGTCCGGGTGGGAAAGCCTTCAATCCATCCTGTGAATGTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGTATCTGGGTGAAGTTCATCTGCAAGTCCTCTCCTGGGTAGGCCCCACGTCGTTGGACGGGCTGGGCCAGCTGGGGTCTTCGAGCTCCTTGGGGGTTGTTTAATTGGCAAGTGCGACAAGAGGAGACAACCTGTCTTATAGTTGTTTGGAGGCCTGTTCCTCTGAAGGACCTTTCTAGTCATCTTTGGAGGGCTTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTTCAGGCAGAAAAAGGAGTCCCTCCTTTTGGAACCACCCCATATGATCTTCTCGAAAGCCCTCGCTGTTAGCTTTAAGAGTCTCACCTTCAGTATATGAAGGAGTTTCTGGCAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGCTGCTTGGTTCCCTCGTGCCACTTCCATGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGCAGATGGGCTGCCTCCAAGAGTCGAAGAATCTGATCACCATATTTGATTGGGGACCCTCGGGTGGTCAAGTGACCCCTTTCTTTCCAAACAGCCGCATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCATACCTGGCTCTTCTTTTTCCATCCAAGACAAAGCTGCTTCCATCAGTGTACCAGATTTCCTCAGGATTGGTCAGAGAATCTTCTGACAATCCCTCTTGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAAGAGTGAAATGGAAGAGAGCCCTCGGGGGTAGGGAGGAGGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGGATTTTCCATCAGCATTACATGATATCTGAGGGTTCTTTGATCAGACATCCATAAATGGCCTCTCCCATTTAGAAGTTGTTTTACTTGGTGGCTGGTAAAAATAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCTAAGGCAGGGGGGCCAACCTTGGGAAGTTGGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATCCCACTCCCAAGGTTATTCCCTCTCTTCCATGGACATAAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGAAGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCTTCTGCCTCCTTTTGAGGATTTCCCCACATCAGTGGGATTGAATCATCTTGTCCCTTTAAGCTTTCATATAAGGGCTGGGCAATTAGACCATAGTTGGGTATCCAGATTCTACAGTAACCAGTTAGCCCCAGGAAAGCTCGCAATTGTTTTCGAGTTGTGGGGGAGGGCAACTGGAGAATTCCTTGTACCCCATCAGAGGACAGCCTCCTGGACCCGTGTGTAATCTGAATTCCCAGGTAAGTGACCTTTGTCTCGACCATCTGTGCCTTAGTATGGGAGACTTTATATCCCCTTTCTGCCAAGAAGTTTAGAACCTGAATTACATGTTGTTGGGCGCTTTTCTCATCTGGAGAGCAGATTAGTAGGTCATCTACGTATTGTAATATTTTCCCATTAGGTCCCAGGTCCAGATCTAGGAAATCCCAGCTAAGGGCCTGTCCAAACAGGTGGGGGCTATCTCTGAACCCCTGAGGTAATACTGTCCAAGTCATCTGTTGGTGTTTTTCTCCTGGGGCCTCCCATTCAAAGGCAAAATGTTATTGGGATTCTTTAGCCAGTGGTATGCAAAAAATGCATCTTTGAGATCCAAGACAGTAAACCATTTGGCACTGGGTGGGATTTCTCCCAAGATTACATAGGGATTGGGTACTGTGGGATGGAGGGGGACTACAGCTTCATTTATAATCCGGAGATCTTGAACCATTCGCCAGGTTCCGTCTTTTTTCTTTACTGAGAGGATTGGGGTGTTACATGGTGAACTGGTAGGGACCAATAGCGCACAAGTAAGGACTTTATTTATTAAAGGCTGTAGTCCCTCCAGAGCCTCTCTTTTGAGAGGGTATTGTTTCCGGTTAGGAAACCGAGTGGGATCTCGGAGGACAATGATGACCGGTTCAGCTTGGTGGGCTCGCCCAGGAATCCCCTGGTCCCACACCTGGGGGTTAATTTTGTCTTCCCATAGTTTTTGGTCCCTCTCTATTGAAGGTGTAATGGGTTCTTCAGTAGTAACCAGGAGCTGTAGAGCTCTAGGGGCTGAAAAAGTTCCCATCACAAGGGTGGTACCCAGTTTAGTGAGTATATCTCTTCCCAATAAGGGGATAGGACACTCAGGGACCACCAGAAACTGGTGGGAAAATATTTATCCATCCCAGCAACAAAGAAGTGCTTGGGTGAATCTTTTAGTAGTTGCTTTTCCTGTAGAACCCAAAATGGTACAGGTTTGGGAGGAGAAGGCTCCGGAGTAGGAGATCAAGACAGAGTAGGTAGCCCCTGTGTCAGCCAAGAAATTCTCGGACCTACCTGCCACATCCAGTTGCACCCTTGGCTCCAGCCCCGTGATGGTCATCTGTGACAGGCGGGCTGGCTGGAGTAGGCCGCTTCAGTCCTCTTGAACCATAGTGAGGGAAGGCTTGGCACTTGACCTTGAGGCTCTTGGGTCCCGAGGGCAGAGTGCCACCTAATGTCCCAGTTGATGGCATTTGTGGCAAGCTGTTCTAGGAGACTTGTCACGGTTTGGACACTCTTTGGCCCAATGCCCCACCTGTCTACAGATCAGGCATCTATCTCGTGCCTTGTCTCTCAAGGACTCAGGGTTTGCCATAGGGCTTCTCTGGAGGGCGGCCAGCATCTGGGCATGCCTTGTCTCTTTCTTTCTCTCCTTCTCCTGGGCCTTGGCCTCCTTCTCCTGTTCCCTGTTATAAAAGGTATTGGTGGCTGTCTGGACCATCTCATCTAAAGAGGCAGCAGGGTCCTGCTGTTGTAGTTGCTGTAACTTAATTCTGATATTTGATGCACATTGGGACAGGAATTTGTCCTTTAAAATCACCCGTCCCTCTTAAGAGTCTAAGTCCAGGTTGGTAAACTTTTGGATGGCCTCTTTTAGCCTCTCCAGAAAGGCAATGGGGTTCTCACTGGGCTCCTGAGTTATTGCTGAGACTGGGCACAGTCCCACAAGTAGTAGGCTTTTTTTATGTTTCCATGGGTGGACTTCCTTAGGGAAGTCTTTCTAAAGCTTATCCTACCCAGAATGGTTGCAACCTGAGAGCCAGGCGTCCCTGGGTCAGGGTGCAGATCCCCAGGCAGGCTGAGGCATGACAGCCTCCTAGAGATCCAATCCCCGGGCAGGTTGAGGCGTGACGGCCTCCTGAGAATTGGGTCTCTGGGCAGGTTGAGGCGTGACAACCTCCTGGGACCCCTGGACTAGAGGATCCCCGAGCAGGTTGAGGCGTGACAACCTCTCAAAGACTGATCCCTAGGCAGGTCAAGGCGTGATGACCTCCTGGGACCCCCCGGACTGGAGTTTGGGCGTCCCCAAGATCTCCAGTGTGACCAATATTGGGTAGGATTAGGGGTTGGATATTATAGAGTATTTCCCTCCCAAGGCATGAAACAGGAGGGAAGGGGGCAGAGCACAAACTTTGAAAGAATGACATAAACCAATTAAAATCAATTGAGTCCAAGATGACAAGTCAACTTCAAGTAAACCTTAATCCCCAATCTATAAGCCAACAGACACACCCAGAGGTGGCAGGACAGCTCCAAGGCACAAGATCAGAAGAGGGAGAAGTGGGTGGTTCCCCAATGGCTGGGATGATCCTCTCACTCATTAGCATATGAATTCCATCCCCTCACAAAACCTAGCCAGGCCTAATACCATGGCCGCAGCCCTTGCCCTCAGCAATGGTTCACACCCTGAAGAGTGGCTTCTCTCTGGATCCTAACAAATCTACCTCTTATCGCTTTGTCTCTCAATGAATTTTTGCAATGAGACACCAGAGCCTGAATTTCACTAGTTTTGGCCGGGCTTGAGTCCCGGGAGAGAGCTGAAGGACAGGAGGAAAAAGCAGTGGGAAAAACATGCCAAGGAATCCCCTTCATAGCCCGCTGGAAAATTTGCTGAATATCTGACCGGTACTCACAGTTTCATTGGTCTAATCTTTGGCACAGAGAAGAGAAAGGACAGAAGAACCCCACCGGCTTGTGTAACAGCTACTGAGGCTCAGTAGATAGCGCCTTTGGGACATGCTGAGGAGCAGCCTCTCCCGAGTCCCTCAATTGTGCCCCTGCCGCCTGCCTGTTCGCAGGAGGTTCGAGGAAACAAGAAATGAGAGATTGTAAAGGTCCCTCCAGCCATAGGAGCGAGGACCTCTTACCTTAACCGGAGGTCTTCTGGAATCTGAGACTGGGCCACGTGAGCTTTCTGCTGAGTTCGTTTTTCGCTGTCCCGGTTTCCAGCACGATGGGCCTTCCCCTGCTCTGGGTTTCTTCGTCTTCTGCTTCTAGCGCGGGAACTTCGCTGAGTTGGGCTCCTGCTGTGCTTGGCCTCTTCCGCGAGGAGGTTGTTTCAGCCAGGTTAAATCCGAGTCACGGCACCATAGATGTCACGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCATGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAGAGGGAGAGAGAGAGAGAAAGAAAAGAGTGCACGCACGCGGGAGAGAGAGTCGAGAGAAAGCGCTTTGGCTCCTCCTTTTATATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTCAGCCAGGAGTGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCACCATTTTGGACTTCTTTCCCCTATTCTACCTACCTAACAGATCCTTGCTGGGTACAGTAGTCGGGGCTGTAGGTTATTTTCTTTCATCACTTCAAGTATGTCCTGCCATTCCCTCCTGGCCTGAAGAGTTTCTATTAAAAGATCAGCTGTTATCCTTATGG TCONS_00092057 . 3' 38382 TCONS_00092057 . 3' 46009 EMBV3_36322 CTATGCACACGAGCGTCTTTGGAAAGGGGACCACAAAGATGAAAGCATGTCTCAGTAGGC Gene GeneID:281407|PLAT:NM_174146:14_cdna Constitutive 0 NULL GeneID:281407 27 GENE PLAT MGC127559 plasminogen activator, tissue EMBV3_01769 ACGCCAGCCCTTGAATGTGTGCAGTGGTAGGGCCTCTCTAATGAATTTTTCTTCTATGTC Gene GeneID:533984|SUB1:NM_001105407:48_cdna UTR3_Alt 2 NULL GeneID:533984 20 GENE SUB1 NULL SUB1 homolog (S. cerevisiae) EMBV3_30212 CTTGTGGATATCGCCCCTCGGGTTCTTTGCCCTGTGGTTTTCATCCCATCAGCATTGTGT Gene GeneID:528816|KRTAP26-1:XM_002684610:78_cdna Constitutive 0 NULL GeneID:528816 1 GENE KRTAP26-1 NULL keratin associated protein 26-1 EMBV3_13766 CCATTAAGCAACAGAAGTCACTGAACCCAGGCACACAGAGGAAACCCTCAAAAGCCAGTT Gene GeneID:514537|PCDH7:XM_002688187:12_cdna UTR3_Alt 2 NULL GeneID:514537 6 GENE PCDH7 NULL protocadherin 7 EMBV3_28657 GAGCTCTTCAGCAGTCTGAAGAAGGGGAAGAGCCGTCTGCAACTCCTGTAGCATAAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11264 TGTGCTAGGGATGGCCTTGCAGACAGTTGGAGTCACAGATACATTAATTACGGCGAAGGC Gene BVT0102_069167 + 0 NULL GK000002.2:96472145-96532556 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08668 GAGGACCAGCGGGCCCGGGCCCTCCAGAGTGGGAGGTGGCTGTGGGCCCGTGTTCCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30967 CAAGATCACCAACATGACCTTCCAGTACAGGTCGGAGGAGCGGCCTGTGAAGAAGCGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21317 GGAGGGACAGATAAAAGGCAGTGTTTCTCCAGCTTAAATACAGACTGTGGAGGGCTAAGG Gene BVV0102_168169 + 1 EMBV3_07898 GK000007.2:1602464-1604738 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214987 TCONS_00214985 TCONS_00214986 1 XLOC_130809 Coding TCONS_00214985 XLOC_130809 Coding Coding RUFY1 7:1603165-1658503 j TSS160671 3951 1 TCONS_00214985_2 494 17 0.928908325351935 3.47640325406843e-11 4.34317621659878e-09 1.55085548498009e-08 1.10433846281529e-05 8.91340330683476e-05 0.000134727309035233 1.9324278250979e-12 1.20064707408869e-05 1.3854983090814e-05 5.99766624275593e-05 3.66410017811923e-16 4.91068722233047e-09 1.59986645425212e-07 6.82138550571493e-10 4.15909236443659e-06 0.000438205044685863 0.000117889402280941 0.00155386479061274 2.44864414615088e-11 6.82323953375594e-09 1.13274991101498e-09 2.06350545545665e-08 9.8864617683249e-05 0.000510030146576092 0.000452923348574311 1.48702340365546e-08 1.15159456518568e-07 5.60555198702076e-11 1.52149948792501e-08 2.31438499284201e-09 XM_001790223.2 RUFY1 PREDICTED: Bos taurus RUN and FYVE domain containing 1 (RUFY1), 0.0 6673 100.00 0.93621867881549 NM_001040452.2 RUFY1 Homo sapiens RUN and FYVE domain containing 1 (RUFY1), transcript 0.0 2080 90.48 0.382687927107062 TCONS_00214985_2 sp|Q96T51|RUFY1_HUMAN RUFY1_HUMAN RUN and FYVE domain-containing protein 1; 0.0 889 93.91 0.995951417004049 2 coding 0 0 0 0 -0.00640765982214317 0.967452083970083 -0.0531982288334261 0.733877555785275 GGCCTCAGCCGCCCGGGTGAGGCTGTGACCTCCCGGGGATAGGGGCCGGTTGGCTGAGAACTCCAGTTAATCCGCACCTTCCAAGGGCCAGATGATGGAGGAGCGTGTCAACCTGATGCACATGATGAAACTCAGCATCAAGGTGTTGCTCCAGTCTGCCCTGAGCCTGGGCCGCAGCCTGGATGCAGATCACGCCCCCCTGCAGCAGTTCTTTGTAGTGCTGGAGCATTGCCTCAAACATGGGCTGAGAGGACAGCTGTGGGAAGGGGCAGAGCTTGGCTTTATCTTGCACTCATGCAGAAGAAACTAGCAGATTATCTGAAAGTGCTTGTAGACAATAAAAATCTCTTGAGTGAGTTCTATGAGCCTGAGGCATTAATGATGGAGGAAGAAGGGACAGTGATTGTTGGTCTGCTGGTGGGACTCAATGTGCTTGATGCCAACCTCTGCTTAAAAGGAGAAGACTTGGATTCTCAGGTTGGAGTGATCGATTTTTCTCTCTACATTAAAGATGTGCAGGATCTAGATGGCGGCAAAGAGCATGAAAGAATCACAGACGTCCTTGATCAAAAAAATTATGTGGAAGAACTTAACCGGCACTTAAGCTGCACAGTTGGGGATCTTCAAACCAAGATAGATGGCTTGGAGAAGACTAATTCAAAGCTTCAAGAAGAGCTTTCAGCTGCAACAGACCGAATTTGTTCACTCCAAGAAGAACAGCAACAATTAAGAGAACAAAATGAATTAATTCGTGAGAAAAGTGAAAAAAGCGTAGAGATAACAAAACAAGATACAAAAATTGAACTGGAGACTTACAAGCAGACTCGGCAAGGTCTGGATGAAATGTACAATGATGTGTGGAAGCAGCTGAAGGAGGAGAGGAAAGCCCGTCTGGAACTAGAAAAAGAACTGGAGTTACAAATTGGAATGAAAACTGAAATGGAAATTGCAATGAAGCTACTAGAAAAGGACACCCATGAAAAGCAGGACACTCTAGTCGCCCTGCGCCAGCAGCTGGAGGAAGTCAAAGCCATTAACTTACAGATGTTTCACAAAGTCCAGAATGCCGAGAGCAGTTTACAACAGAAGAATGAAGTCATTACATCTTTTGAAGAAAAAGCCAATCAAGTCATGTCCAGCATGAAACAAGTGGAAGAAAGGTTACAGCACTCAGAGAGGGCGAGGCAGGGGGCCGAGGAGCGGAGCCGCAAGCTGCAGCAGGAGCTCAGCGGGAGGAGCAGCGCCCTGCAGCAGCAGCTTGCCCAGCTGCACGAGCAGTGCGCAAGTCTAGAGAAAGAGCTGAAATCAGAAAAAGAACAAAGACAAGCTCTTCAGCGAGAGTTACAGCATGAGAAAGACACTTCCTCTTTACTCCGAGCAGAGCTACAACAAGTAGAAGGATTAAAAAAGGAGCTGCGGGAGCTCCAGGACGAGAAGGCAGAGTTACAGAAGATCTGTGATGAGCAGGAACAAGCCCTCCAGGAAATGGGTCTGCACCTCAGCCAGTCAAAGCTGAAGATGGAAGACATCAAAGAAGTAAATAAGGCACTGAAGGGCCATACTTGGCTGAAAGACGATGAAGCAACACACTGTAAGCAGTGTGAAAAGGAGTTCTCCATTTCCCGGAGAAAGCACCACTGCCGGAACTGCGGCCACATCTTCTGTAACGCGTGCTCCAGTAATGAGCTGGCCCTGCCCTCCTACCCCAGACCAGTCCGTGTGTGCGACAGCTGCCACACCCTGCTCCTTCAACGGTGCTCCTCCTCCACCAGCTCCTAAGGCAGGGGCCTCAGCAGGGCCTGCTTTCCAGACCAGTTGCCAGCCTATCTTCATCTCTGTGGGCAGCCTCAGAACAGTGCCAAACTCTCTGGGTCTTGAGTTGGTCTGGGACTTGGAAGGTTGGTTTCCAAGCTGGGCTGCTGGCCCTCTGGAACGCAGCACACAGGACTGGAAGCTGCACATGCCTCTCCTTTCCAAGTTGTACAGAATCAACTCCTCTGGATTGAAATTCTCACTTGACACCACCGGCTTTGGTTCAGATGCAACTTCATGATTTTGCTATTATCATTTTTCAATTTCCAAAGAATTAACCTCTTTTGCAACAGCCCAACTAGTTGTAGTAATCAGGTCCTTTTCCTCCCTACCACCCCAGCATGCTTTCCCCTACTTCGGAGTCAAAAAATTCACACCCTTGTGAATATCCATCATTAGCCCTGCAATAAAACTGTTTATTTTTCATTCTGGTATAACGAAGGAGCTTATGTCAGCTTCACAGGATGCCCAGAACAAGCCCCATTTCAGGACTAGAGGCCCTCAGTGAGGGTGGCTGCATCTGAGGTAGAGGCCTGAGCTTGCTGGGTTCTGGGGTGCAGGCTGCTGCCCAGCTGAATAAAGGACAAGCTGAGCTGTCCCCTACACACAACACACACCCCCCTAACTTCCCTCCACCGGTTAATGGCCTTGAGTATTCAGGTTACAGGAGTGTAACAAGTACTCTTAACACAATCAGACAGGTCAGCCCATCTGTATGCAAGGCCTCTTTTTCAGTGCCCGAGTCCACCTCCCACCAGCGTTCTGACCTTGACTGTCCAGCCTCTGCTTGAGAGCCTGGCTCTCTCTTCCTTCTGTACTCTGTCCTAGCACAAGGCACACCCACAGCCTAGCTGATTCCACATCTGCTCACCTAAACACACCGTTACGGATGGGAAACATGGAAGGTTCAACGACATTAGGTCCCAGATCTGTGTGACCAGCCTCCAAAACTGTGTGCCCTGCTTCAAAGCTACATTCATTCCGAAGTGCAGATTTTTGAGTCCTATTTAAGGAAGCACATGGCAGCAAAAAGGGACTTTGTCCTCTTCCCTAACCTAATCTGAGCTTTCTTAACCTCATTCAGGGCCCAACTTTCCCAGCGTTTGCATACCACACTTCCCCCACATGGTCTAGCATTAGATCTGTACCTTGTTCGCAGCGTGCCCAGTTTTTACTCCAACTTGCTGGGGAGCCTTAGGTTAAGTCACTCCTCAGCCTGTCTCATCTGCACACAGAAGGGGAGCAGGATACCTTCCTGCTTCAAGACAGTTCTGACAGTTCCCACCACTACCACACTAAGTGCTCTTCCCTTTATCATCCTGATTTCTTCTAAAACCTGCCCCTGCCCATGCCCCAAGCACTATTCACAAAGAATGCTTGTGCTGGATACTAAGTATCTAGCTGCGGAAAAGAATTTAAGACATCCATTATGTACCTGAACTTTGGAACCCTCAGTTTCTGGTTTGGCAAACTTCTCCTTACTTGGGCAAACAAGGAGGGACAGATAAAAGGCAGTGTTTCTCCAGCTTAAATACAGACTGTGGAGGGCTAAGGGTCATGATAAATGACACCAAGTCTGGAGACTCTGACTGTTCCTAACGAACTCCCAGGTGAAGATGCCGGTCCATGGAGTAGTGTTCGAAAGAAACACAATGTTTCTAGGTATTTTTTCAAGTTTCTTCAACAAAGATGTTCCCTGTTAAAAACCAAAAACTAAAGGACTAGGGAAGATGAAGGGACACTCTCCTTGTGCCTGATTTCCCCTGACACAGACCAAGGAAAGATCTCAAGGGCATTACTAGGTTTAGAACAGTGCATCCCCAGAAAATTCTCTCCAAGCCTGCAGAAGACAATTTATAGAACATTAGAATACTTCTGTATCCCCAACCCAACTGAAGGTATGCACCCAGTTTTCAGAACACATGGAAGGGCAAGAGGATTCAGAGTCCGTCAGTACATCTTCGTGTAGTGCTGCCAACTGCAATCTTCAAGAAGTGCTATCATTCTAAGCAGTTTTTCTACATTCACCATACTAACCACACCCCTTCAGCACTGTCAGCAAATAAAAATAGCTTTGAACAGCACAAGCCTATGTTCACAGCTCCAATTCTGAATTCTAACCTCAATGCAGCAAACTTA EMBV3_05782 GAAAGGTTGCTAAAAGCATTGTGAAGGAAATGGTTCCAGGGTGATAGTTAGCCCGAATAG Gene GeneID:540337|PEX13:NM_001076212:164_cdna UTR3_Alt 2 NULL GeneID:540337 11 GENE PEX13 MGC142571 peroxisomal biogenesis factor 13 EMBV3_04625 CCGCAGACTCGATCCTGAACTTAAACTGGGCGGACTCGATCCTGAACTTAAACGGCATTA Gene GeneID:784637|BICD1:XM_002685538:124_cdna Constitutive 0 NULL GeneID:784637 2 GENE BICD1 NULL bicaudal D homolog 1 (Drosophila) EMBV3_05092 GCACTTCACACTAACAAAAGCGAAATGTGTACCCAGCCCATTACCGATGCTGCCTTTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32747 CGATGTTGTACCTAGAGGACTATCTGGAAAATGCAATGGATCAGCTAGAACAAAGAGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35843 GCTGAAGGAAGATGCCAAGAAGGCCATAGAAGCCCTGGGAAGTACAGAGATCAGGAACAT Gene GeneID:514701|LOC514701:XM_002685114:26_cdna Constitutive 0 NULL GeneID:514701 1 GENE LOC514701 NULL similar to Protein FAM3B precursor (Cytokine-like protein 2-21) EMBV3_29745 CAGCTGCTCTTGAACCACCGCTCAATTTGCCACAACCGAACAAACTCCAGCTCATTGCCA Gene GeneID:529590|SCN1A:XM_002685328:163_cdna Constitutive 0 NULL GeneID:529590 2 GENE SCN1A NULL sodium channel, voltage-gated, type I, alpha subunit EMBV3_25500 GGTCACACAGCAAGCTTCAGACTAGAATCACATTTTCCTGAGTCCCTAGCCTTCCACCCA Gene BVV0102_387941 - 1 EMBV3_22254 GK000017.2:72247005-72273493 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29721 GGGACCTTCGATCCCCATGTTTTGCCTGTGAATACAAACACTTCTTCCTCAGCCTCGAAC Gene BVV0102_146669 - 1 EMBV3_23138 GK000020.2:49533352-49951407 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43662 GAAAAGGACAGGAAAGAGCGGAAAAGGGATCACTCAAACAATGACCGAGAAGTGCCACCG Gene GeneID:507738|THOC2:XM_002699496:57_cdna Constitutive 0 NULL GeneID:507738 X GENE THOC2 NULL THO complex 2 EMBV3_05466 ATGCTAATGTACTATGCCTTTACCCCAAACTCTGTCTCCAAGTCGGTTCCGCCTCTTGGC Gene BVV0101_060472 + 0 NULL GK000002.2:30184720-30321634 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229354 TCONS_00040888 TCONS_00248730 TCONS_00188848 TCONS_00049674 TCONS_00176420 TCONS_00091551 TCONS_00135546 TCONS_00166151 TCONS_00210913 TCONS_00065232 TCONS_00196835 TCONS_00161487 TCONS_00140862 14 XLOC_138849 XLOC_024702 XLOC_151675 XLOC_114889 XLOC_029805 XLOC_106198 XLOC_056325 XLOC_081769 XLOC_100989 XLOC_129423 XLOC_039954 XLOC_118500 XLOC_098376 XLOC_085291 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_42467 TCCCCAGTCCTTCTGTCTCTTCTGTCCTGGCTGTCTGTGCGTGTCACTCTGGAACTCAGA Gene GeneID:614601|C5H12ORF53:NM_001083767:79_cdna Constitutive 0 NULL GeneID:614601 5 GENE C5H12ORF53 MGC151595 chromosome 12 open reading frame 53 ortholog EMBV3_01132 TTCATTCAGGAATTGAAGTATATGGCAGAGAGAAGCTGTTGTTTTAGGGAGCACTGACTT Variant GeneID:519650|PPPDE1:NM_001100384:50_cdna 137^230 2 EMBV3_22208 GeneID:519650 16 GENE PPPDE1 FAM152A PPPDE peptidase domain containing 1 EMBV3_27651 CCCCAGGCAGCAAAGATTGGGTGACGGCACTGAAAGGGTGTGAGGACTACTTATTTATAG Gene GeneID:505149|DYRK3:NM_001100298:34_cdna Constitutive 0 NULL GeneID:505149 16 GENE DYRK3 NULL ual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 EMBV3_09435 TGTTTACGTGCCAACTCTAGGTACACAGTCAGGTTCTTACACATCCACACGTTCTCCCCC Gene GeneID:785834|NUP210L:XM_002686017:418_cdna Constitutive 0 NULL GeneID:785834 3 GENE NUP210L NULL nucleoporin 210kDa-like EMBV3_10748 ACCACCTCATCGTGGGTGTGCACACTGATGATGACATCACGCTGACCGTAGATGGCCGGG Variant GeneID:510274|PCYT2:NM_001035089:69_cdna 214^375 1 EMBV3_36903 GeneID:510274 19 GENE PCYT2 NULL phosphate cytidylyltransferase 2, ethanolamine EMBV3_02129 AGGCCTCGGCATATTTGCAGTAGAAGTGGCACCAAACTCTACAATGGTCTGTCAACATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01071 GAAACAGAAGAGACCATACCAAAAATACAACAAAGCCAAAAGCTGGTTCTTTGAAAGGAT Gene BVV0102_141078 + 0 NULL GK000030.2:73236683-74057772 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17810 AAATAGCCTTGTGCGTTCTAAAGGGTATGAACATCAGGCATGTCCACCAGCAGCCCGATG Gene BVT0101_035144 - 0 NULL GK000028.2:38351433-38687352 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32331 GTTTTCTCCTGGGGCATTGTTAGGAAGCTGTACTGGGTGTTAACTGTTAGATGGTGTGAG Gene GeneID:534770|HNRPDL:NM_001083725:22_cdna UTR3_Alt 2 NULL GeneID:534770 6 GENE HNRPDL NULL heterogeneous nuclear ribonucleoprotein D-like EMBV3_01218 GGAACTCAGAAAGAAGTAAAGGGATAGAATAAGCAGTGGCTCTCAAACCAGGGCCTCCAC Gene BVT0102_160987 + 0 NULL GK000007.2:52998025-53047809 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213484 TCONS_00213482 TCONS_00213481 TCONS_00213483 1 XLOC_130466 Coding TCONS_00213482 XLOC_130466 Coding Coding C7H5orf32 7:53044202-53105372 j TSS159922 4741 1 TCONS_00213482_4 211 0.508964353511917 3 0.922542464320162 0.000321332653786751 4.91627229426559e-05 0.000151751955769302 9.83279324370452e-05 0.000298120665735628 7.42653717360264e-06 1.90370955816651e-05 0.000246747800344322 0.000264732042805922 6.61298948456865e-05 4.34695541952164e-08 3.60330024418837e-05 1.89296796255864e-08 0.000190008663278388 4.41914475582163e-23 5.07636313596477e-05 3.63630753438324e-05 4.00271772584412e-05 0.000164491511556693 0.000769191296416383 0.000190837625435576 8.12669520553397e-07 2.02084652003509e-05 1.26131486271261e-16 8.14252518630161e-10 0.000211579396370504 5.77834706075738e-11 1.85126394680897e-05 3.73648684060181e-08 3.26947157094752e-06 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 0.0 913 91.24 0.137101877241088 NM_001081365.1 Cystm1 Mus musculus cysteine-rich transmembrane module containing 1 (Cystm1), mRNA. 4e-103 381 76.12 0.122758911622021 TCONS_00213482_4 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 4e-83 262 77.92 0.725118483412322 2 noncoding 0 0 0 0 0.111974111941071 0.332517963816309 0.0418479535527078 0.445074133645526 ATTCACACAGTCAAAGGCTTTGGCGTAGTCAATAAAGCAGAAGTAGATGTTTTTCTGGAACTCTCTTGCTTTTTCAATGATCCAGTGAATGTTGGCAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAATCCAGCTTGAACATCTGGAAGTTCTTGGTTCATGTATTGTTGAAGCCTATCTTGGAAAATTTTGGGCATTACTTTGCTAGCATATGAGATGACTGAAATTGTGCAATAGCTTGAGCATTCTTTAGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTTTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGTAGCACTTTCACAGAATCATCTTTTAGGATTTGAAACAGCTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTCGTAGTGATGCTTCCTAAGGTCTACTTGCCTTCTCATTCCAGGATGTCTGGCTTTAGGTGAGTGATCACACCATTGTGATTATCTGGGTCATGAAGATCTTTTTTTAATAGTTCTTCTGTGTATTCTTGCCACCTCTCCTTAATGTCTTCTGCTTCTGTTAGGTCCATACCATTTCTGTCCTTTATTGTGCCCATCTTTGCATAAAATGTTCCCTTGGTATCTCTAATTTCTTGAAGAGATCTCATCTTTCCCATTCTGTTGTTTTCCTCTATTTCTTTGCATTGATCGCTGAGGAAGGCTTTCTTATCTCTCCTTGCTAGTCTTTGGAACTCTGCATTCAGATGCTTATATCTTTCCTTTTCTCCTTTGCCTTTTGCTTCTCTTCTATTCACAGCTATTGTAAGGCCTCTCAGACAACCATTTTTCCTTTTTGCATTTCTTTTTCTTGGGGACAGTCTTAATCATTGCCTCCTGTACAATGTTACGAACCTCTGTCCATAGTTCTTCAGGCACTCTGTCTATCAGATCTAATCCCTTGAATCTCTTTGTCACTTCCATTGTATAATCGTAAGGGATTTGATTTAGGTCATACCTGAATGGTCTAGTGGTTTTCCCTACTTTCTTCAATTTAAGTCTGAATTTGGCAGTAGGAGTTTATGACCCAAGCCACAGTCAGCTCCCAGTCTTGTTTTTGCTGACTGTATGGAGATGACAAGAGTGAACATCAACATTTTAGGAATCTGTGAACTAAAATGGACTGGAATGGGTAAATTTAACTTAGATGACCATTATATCTACTACTGTGGGCAAGAATCCCTTAGAAGAAATGGAATAGCCATTATAGTCAACAAGAGTCAAGTACAACAAATGCAGTACTTGGATGCAATCTCAAAAATGACAAAATGATCTCTGTTTGTTTCCAAGGCAAACCATTCAATATCACAGTAATCCAAGTCTATGCCCTGACCAGTAATGCTGAAGAAGCTGAAGTTGAACGGTTCTATGAAAACCTACAAGACCTTCTAGAACTAACACCCAAAAAAGATGTCCTTTTCATTATAGGGGACTGGAACGCAAAAGTAGGAAGTCAAGAAATACCTGGAGTAACAGGCAAATTTGGCTTTGGAGTACAGAATGAAGCAAGGCAAAGGCTAACAGAGCTTTGCCAAGAGAACGCACTGCTCATGGCAAACACCCTCTTCCAACAACACAAGAGAAGACTCTACTCATGGACATCACCAGATGGTCAATACCGGAATCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTGCTTATTGCCATTATCCCAAACAACTCAGTAAAATGGGAGTGGCCAAGGACCTTACTGAAAACACCATTCTTCTCCCACAGCATGGCCCTGTATGTCCAGCTGCCCTCTCTTCCAAGGCAGTTAACCCTGCCCCCACTCTCATCTCACCTTGCTCTGCCCACATTACAGCCTCAGAAGCTCTGAGCTTTCCCATAGGGCCTCCATCAGGTTCTTCTCACTGCTCCTCCTTCCTTGCAGTCCTCATTTTTGTAATCTCCCTTTCCTTAATGCTGTTAGCACACCCTTCCTTTCAGTAGTCCCTCCTCAAACCACTGTTCCTTCTTCCTCTAGATCCCCTCTCCATTCTCTCCACTCCCAGACTTCTCCCCTCTACTGCATCCCTCAAACCTCATTCCAGCGCAGCTTTTCCCCCACGCATCCCTAACCTGCATTTAGAGCTCCTCTCCTCAGCCCAACCAGCCACCCCAGGTCTGGCTACCCCTGCTCTGCTCCCACCATCTTCCTGCCTCCTAATCTCTGCTCTTTGGGACCTGGGCTCATGTTTTAAATCTCTTTCCTTTTAGTACAACTCTGTCTGGAGCCATGATTCTTCTCTTTCACAGCTGTCTTTCCCCCACCCCATTTATATGCTAGTTTCTTTTTTAAATGTATAAAAATAAACAAGTGTCACTTGAAACAAAACTATTAAGTAAACAGTACAGGTGGTACTTGGATATGAGATGCACCACTCATAAACTTTTAATCTTCAAGGATCGTGCCTTAAGTACCCATTGCCAGTCAAAGATGCTCACTAGAAGTTATTTATAAAGTAACTTTTTGGTTTAAAATCCCATACTCTAAGAGGGAAGGACAACATATATGAAACTTCCATAGTGGTGCAGCGTGTAGGAGAGTAAAACTTAAATGGAACTCAGAAAGAAGTAAAGGGATAGAATAAGCAGTGGCTCTCAAACCAGGGCCTCCACAGGATCTTACATTTTCATTTTGAAACTGACGGTCTATGTCTAGTGACTGGAAAGTCACAGAGATGTAGGCATACCATCATAGTGAGCTAGGGGAGGAAACTGAAGGGAAAATCAATTTCTAAACTGAAAACAAATCGGACTTCAACTAGGACTTTCAGAGTTGTGCTAAGCTTTGCTCTGGGTGTTTCAGTGCTTTCTCTTTCTGTTGGCAGAGGAGGAGGGCTGCAGGACTGGAGGACTGGGCTGGCCTACAGCCTGTTCTTCATCCTGAGTGAATGAAGTCTTACTATTATATTCTCCAGCAAAGGCTGCACTACTTGTTGTGAGGCTTATGGGTAAAGTTGCCAGAGAGCAATCCAGTTACCAAACTCAGCCCCAGTCCTCTCATGTACAGTTTTCGAAGCAAACCCTCAAACCTAGTTGGATCTAGAAGAAGACGCGGAGAGAAGCGGCCCACAAGCGAAGCCTGCAGCATGCCTTGCACTGAATCCCTTATGGGTTCGGTGAGGACACAGGCCCTGAGGCCAGGCACTTGCCCTGACGGTGAGGGGATAACGTCTGGAGTCTCGGAGCACTGATCCAGCCTGAGGTGACTGCCTTTTGGAGCCTCGGGTATCCATGCCCACTTATCCATGCCTACTTTAAGGCCAGAGCAGGGAAGCCGGAGCCGGACGGCCGGACCCGGACCTCGAGTTACCGTAAACCGCTCGGGAGCTCTCTGGGTGGCGCCTCCGGGCCTCGCTGCTCGGGGCGGGGCTCGCGCTGTGACGCCGCCCCCCGCCTCGCCCCGCCCCGCGCGTGTTGCCAGGGTGATCAGGTGACTCCGCGCTCGCGGCGCTCGGGGAGGCCGTGACGTCAGGCGAGCCTAGTCACCTCTCTTGCTCCTTGGCAGGTGCGGCGCCACTTGTGCGGTGTCGTCAGGTTCCAGCGGGTCCCGGCCGAACCAGTGCTCAGCGGATTCGTAGAGAGGAGAGGTGTACTCTGCAGTCCCTGATGAACCAAGGGAACCCTCCGCCGTATCCGGGCCCCGGTCCGACGGCCCCGTATCCCCCTTATCCATCGCAACCGATGGGGCCTGGGTTCTACCCTCCAGGACCTCCAGGGGGACCCTACCCACCTCCTCAGGGTGGGTACCCCTACCAAGGATACCCACAGTACGGCTGGCAGGGCGGACCTCAGGAGCCTCCTAAAACCACAGCGTACGTGGTGGAGCGGGAGAGGAAGACGGAAGACACCGGGTGTCAGGCGGCCCTGGCCGCGTGCTGGGCCGCTCTCTGCTGCTGCTGCCTCCTGGAAAGCCTGGACTGAGCAGCGGCGCCCCGAGTGCTCCCTCCAGGCCCGCTACCTTCTGTTACTGGAATAAACAACTAGTGCTGCACAGTTGACAGTTTTTCTTTCATTAAAAATTACCTCATCTGCAGACTTCAACATTTTAGCATCTGGGATGGGTGTGAAATGGTATCTTGCTATTTTACCTTCCCTGCTTACTAGTGACCTTGAACATAAATATGTTTTTGACTTGTCTTTACAAATCCTGTGACTTGCTTGTTAAGAGTCTTAGCCCATTTTTTCTACTTGTCTTCTCTTACTGATTAGTAGGGAAACTTAAAAAATTCCACACACTAATATTTGTCACTTTCATAGGTTTGGAAATATCTTCTGCCTGTCTCTTAACCTTTTTATAGTGTGTTTTCTAGTATGAAAGTTTCTAAATGTTATGTTTATCAATCTTTCCCTCATGCTTTGTGTGTTTTAATCTTCGATGAAAGATAAGTCTATATTTTCTTCTAAAACTTTTTAACAGTCTTTAGTCCACCTAAATTGGTTTTTGATCACCGTGTAGGATAGGGTTCTGGTTTTTTCTGTTTTGATAGTTCCAACACCATTTATTAATTAGGTCACCCTTTCCCCATTGATTTAAAATGAGATTTGTCATACACCAAATTCCCACATACAAATGGGCTAGAATGGGGAATCTGGTGTGATAAGCATCTTCGCTG EMBV3_08942 TGGCTATCCATCTGTCTTGTTCCTCTACTCTGTTCCTGTTGGCTTTATTCTCGTCAGCTT Gene BVT0102_041478 + 0 NULL GK000028.2:6298894-6492388 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158921 TCONS_00158919 TCONS_00158917 TCONS_00158918 TCONS_00158920 TCONS_00158923 1 XLOC_097314 Coding TCONS_00158923 XLOC_097314 Coding Coding LOC616014 28:6252136-6301609 j TSS119212 5563 1 TCONS_00158923_3 741 10 0.887754689521345 0.000531411442927528 0.000898850432348913 0.000650859434751367 0.000447646115195666 0.00020973536557074 0.000312940008650599 0.00026679893058034 0.000242295243341881 0.000370711220654435 0.000420457178188468 7.21763317088382e-05 0.000135151994564907 3.36787473672472e-05 3.25600949285584e-05 0.000227742795765233 0.00040813175578152 0.000128188135384847 0.000211945516318678 0.000293195909620314 0.000342912477471434 0.000283977538328417 3.77961128297479e-06 0.000183022926666047 3.30044622019006e-05 0.000346940926374138 0.000279238846740471 0.000509152510632324 1.96746286176333e-05 3.97328902280476e-05 0.00024246256513751 XM_005197235.1 LOC616014 PREDICTED: Bos taurus mixed lineage kinase 4 (LOC616014), 0.0 9061 100.00 0.90293007370124 NM_032435.2 KIAA1804 Homo sapiens mixed lineage kinase 4 (KIAA1804), mRNA. 0.0 3324 75.46 0.850260650728024 TCONS_00158923_3 sp|Q5TCX8|M3KL4_HUMAN M3KL4_HUMAN Mitogen-activated protein kinase kinase kinase MLK4; 0.0 1019 76.01 0.998650472334683 2 coding AGGGGAGTGGCACAGCTTAAATGCCTTAGAAATGCAGAGAACATCTAGAGAAGTCCTGAGGGAAGGCACCCAGGGGGACATGGTATTTACAGGCTCGTATAATATGGGAGCAGGCAGAGAGTGGCAAAGCTGTTCGTTTTTGGTTTTTTGGTTTTTTACTAGAAGGGGAAATTGAGATTTTTACTAGAAGGGAAAATTGAGATTCCAAAGGCCAGTGGAGCTGAAGGTGCTGCAGCGAGGATCCAGTGCTGCAGCGAGGATCCAGGGCTGGAGCTGGGCTGCCTCCATCAGAAGTGGAGGCCAGGTGCGGTGTTGTGGAGGGTGCAGGTGGGAGGCGGTCCACACAGCTGGCACCAGGAGCAAGGAGACGCTAACGTAATGGCATGTTTTTTAGAAGTGGCCTTTAATGTACAGAAATTTTAGGGTGTAGGATTCCTTTTGGAAAGTCCAGGAAGAGCTGAAAAGACACAGAGATGAGATTGAAAAGGGACTTGAAGACCAAGATGAAGGCCTCCAGAGACTGTTTTGCTACTCGAGAAGATAGAGCATGATGACATCTGCAACAAGACACTGAAGATTACAGACTTCGGCTTGGCGAGAGAATGGCACAGGACTACCAGGATGAGCGCAGCGGGCACGTACGCCTGGATGGCCCCGGAAGTTATCAAGTCTTCTTTGTTTTCCAAGGGAAGTGACATCTGGAGCTACGGAGTGGTGCTGTGGGAGCTGCTCACGGGAGAAGTGCCCTACCGTGGCATTGATGGCTTGGCTGTGGCCTACGGGGTGGCAGTCAACAAGCTCACTCTGCCCATCCCCTCCACCTGCCCTGAGCCATTTGCCAAGCTCATGAAAGAATGCTGGCAACAAGACCCTCACATTCGACCATCTTTTGCTTCAATTCTTGAACAACTGACTGAAATTGAAAAGGCAGTTATGACTGAAATGCCTCAAGAGTCCTTTCATTCCATGCAAGATGACTGGAAACTGGAAATTCAGCAAATGTTTGATGAGTTGAGAACAAAGGAAAAGGAGCTGCGCTCCCGGGAGGAGGAGCTGACGCGGGCCGCCCTGCAGCAAAAGTCGCAGGAGGAGCTGCTCCGGAGGCGGGAGCAGCAGCTGGCCGCGCGGGAGATCGACGTGCTGGAGCGAGAGCTCAACATCCTCATCTTCCAGCTGAATCAGGAGAAGCCCAACGTCAAGAAGAGGAAGGGCAAGTTTAAGAGGAGCCGCCTGAAGCTCAGAGACGGCCATCGCATCAGTTTACCTTCAGACTTCCAGCACAAAATAACCGTACAGGCCTCCCCCAACTTGGACAAACGAAGAAGTCTGAACAGCAGCAGCTCCAGCCCACCCAGCAGCCCCACAGTGATCCCCCGACTCCGAGCAATACAGTTGACCTCAGATGAAAGCAATAAAACTTGGGGCAGAAACACCGTCTGTCGACAAGAAGAATTTGAAGATATAAAAAGGAACTTCAAGAAAAAGGGTTGTACCTGGGGTCCAAATTCGATTCAAATGAAAGAAAGAACTGATGGCAGAGAAAGAATAAGACCTCTCTCAGATGGCAACAGTCCTTGGTCAACCATAGTAATAAAAAATCAGAAAACCACGCCATTGGCTTCATTATTTGTGGATCAGCCAGGTGCTTGTGAAGAGCCAAAACTTGCCCCTGATGGATTGGAACACAGAAAACCAAAGCAGATAAAATCACCAACTCAGGCCTACATCGATCTACCTCTTTGGAAAGATGGCCAGAGAGAGAACCCGGTGGAACCCGAAAGCCGGGAGGAGGGAACCCCAGTGAGCCCTGCTGCTGACACTCCTCAGGGGACCCCTCCAAACAGTCTGAGCAGATCCCCCCAGAGAAAGAAAACGGAGTCTGCTCTGTACGGCTGTACCATGCTGCTGGCATCGGTGGCTCTGGGCTTGGACATAAGAGAGCTCACGAAAGCACAGGCTCCCGAAGACCCATTGCCCAAGGAAGACAGGAAGAAACGAGAAGGCATCTTCCAGCGGGCACCTAAGTCTCGCCGCAGTGCCAGCCCTGCCGCAAGGCTGCTGGCTGTGGGCGAGGGAGCCAGCAGCACCCCCTCACCCCCACCGTCCACCATTGCAAACCTCCTGTCCGTGCCTTCCCTCTCCACCAAGTGCCTGCTGCAGACCGACGGTGAAGACTCCTTCGAGAGCAGCACACACATCTCTTGTGCCCCTCGGGTGCCCACTCCAGATCCTTGCCCTGCGTTTGGAGGGAGGGGCCAGAAGTCAACCCCCATGCCAGGACTGGAGACCAGCCGTGATGGGTGGAGAAACCCGCCTCCTTCCTTCATGGAGCTGACACGTGGGGGCGTTTCTTACGCTGCTGCTTCCAAAGAGAGAGCAGCAAGTCACCGAAGGACCATGTCTGATGGAAGTGCTCCCCAGCCCCCAGCTCTCATCTCAGCCCCCGGAGCCTCTGAACTGCCCTCTGAGTGGGTTTGGGGGATGCCCCCCTCCCTGTCTGGACCTCACAGTGACCTGCCAAGTGAGGTCCCGCCTGAAAAACAAAGAGCTGTCCATATGGTGCCTCTGCCTCACCCTCCGCCCCTAAGAAGCCGAGGAGGTGCCCTGCAAGCCTTCCCGCCGAGAGCAGAGTCTCAGCCCTCACAGGCTGGCCCTGCAGTGGGTGGTCCAGGACCAGCCCACAGCTGTCCTCTCGGCCCCAAGAAGAGAACTCAGCCCCACATGCCTTCCTTACTGGACTCCGACGTGGAAGGCCAGAGCCGGGACCGCACGGTGCCTCTGTGCAGGATGAGGAGCAGAGCGAGCCGACCATCTCTGTATGAACTCGAGAAAGAATTTCTGTCTTAAGTGCCTTCTGTTGTTTAAGCATTTCTTTTTGTTTTTTTAAGGTGAACAAATGAAAACAAGGTGTCTACCTTTGAATCGTTTCATGCTGCTGTGTTTTCAAAGCTGTGGCCGTGTTACTGAAATAGTAATGGATGTCTAACTTCTCCAGAAAGGGAAGTCATTGCTGTTGGCTGACTGTATTGTTTGTCCACTGGATTCTTACCTAGCAACTTGAAATACCACACACACTATACAGCAAGAACTGTACAACAGAGTGAATCTGTGTTTAAGCACAACTTTAAATACTTTTTCTCCCCATTTATATTCTTTTCTGGTATTGTTGTCATTCAGTCGCGCGACCCCACACACAAAAATTTTAAGAGTGCCATTTCTGTTTCCTTCTTTCCTGTTGCCTTCCTTCATTTTCTATTTTCCTTTCTCTTCTTTTCTTCATTTCTCACTTTTCTTTTGTTACTTGTGCAACAAAAGCCAAGAATAATGTGATATTAGTGAGGAAAGTTGTCTGTTTTTAAAAATTTGATAACTAGAATAGATGCAGAGTCCTATTTAAGCTACTTAAGTTCAGCAGTGGGCTTATAATGCACAAGTATGTCCAAATCTCATCTAAAATATGCAATGTTTCTCTCTTTTGAGAAAATTTTACTGAATGTAGTTTATAAAAGTTATAATGAATGTAACTTCTAAAAATTTTATCCATTGGAACTCCAAAATAGATTTAAAACAGATCAGTCATTAACATTTGACTTAGACCATATGGTATACAGCTCAGACCCACTAACCTGTGGGTTCTCCCTGTAAAAAAGGTCCCCCGTCATCAGTAGCTGTTGATTTGGTATCCAGAAGTGTAAAGCTTTTCTTTTGCCATGGAGTTTTTAAAAATTAATTGATACATGTGTCATGCATCATAAACATTGATGTCATTAAATTTTTATTTTCTCTATTTAAATGCATAATCATCCCAATAACCTCAAATACAGTCAGTGAGAAACACTGCAAAGTCAAGAAACAGCAGTGCTGTTAGAATGTAAGTATTTTCCAATAATAGTTATTTCACATTTCACTTAATTGTGGATAAGTGTTAGATATCTGCTGGGTGAGATAAGTTGCTGTTGTAGAAAGGAAAAATATAGTTTATTTTCAGATGTGGATTTATAAAATGAATCTTTGGATAACAGATCAGATTTTTAAATGATTTAAAATTATTTTATGAGTCACTTTTATGAATTATACAGATATGCTACAAATAGACTACTGAGTTATTAAGCTATGAAATGGCTATCCAGGAGCTTGGTAAACTTGTCTGGGTTCTTCTGTTAAATATATTATGCTTCTATCATTAGAATATGGTTATGCAGATGACAGATAATAACTATCTTAAATTTTCCATACAGTGAAAAACTTTAATTGCAAATATTACTTGTTACTTCATTTAAAATTTTTCCTTGGTTAAGAGTTACTGAATAATTAAAAGGTCAGCAATTTAAATTAAATCAAGTGTGATAAAATATCTACCTATAGTAGATTTTTAAAAAGTAAAATTGTATTATTTAGCCATTTGGGAACATCTTAGTCATCTAACAAGTATGCCCCAGCAAATAAAGAACAGGACATGAAAGGATTATGTTAATATAAGCGCATTTTGCCCTAAAGAAAACAGTCTTGTATTTAAGATTCTTGCAGCAAAATCTCAGGTACTTAATTACATTTTGTTGTGTTGTGGTCCATTCTGTGATTTGACTTCCCTTTGGGGTAGCTGTTGAATTATGTAACAGAGATTTGGTTTCTTCAAAATTGTATCACACTTGAAAATATGGTTGACTACTTCATACTCAGTCACTTGGGGCATGTAACTTCCAGCTAAAAGTAAAGGAAATATGTGCCTACAATAATACATGAAACACAAAATATAGCAATTATGTTTTCAGTTTTGCTTCTACCAAAACACTGTGTACATCTGTGTGTGGCGTGGTGTGTGAGGGTGGGAGAGTGATGGCTATCCATCTGTCTTGTTCCTCTACTCTGTTCCTGTTGGCTTTATTTTCGTCAGCTTTACATTATGAATTTAGAAATGAAGCTATATTAAAAAGACAATTATGATAAAAGGACTCAATCTCACATGTTACTGCAGATAGTTTTTGCTGAGATCCACTGTACATCTGTGATTTTCTATGTATATTAGTATACTTAGCAGAATCTGGTTATTTATTTTCATATAGACTTAATAGCTCACTGAAAGATAAATTAAACTGATTCTTATTAGTCAACAATTAAGGTGCTCCCACTGCAGAGATTTGAGGCCTGGGCCTGATATGCTGTATTATGAAGCTTTGTGACTGAAAAAGATGTTTACATATGTTGTCTATTTTTTTAATAAACTTTTTTTTATAGCTTGTCTATTTGCTCAGTAGCTTTGGTCTACTCCTGATGATTGTGACTAGTTTGTAATAGTTTATTTTTTATTCAATAAGGGAAAGTATGTTAATAAGATTATTAATAAGCCAGATATTAACCTGCTAAATTGATTAAATAGAAGGATCATGAAATGAGCCATGGGATTAAATATCTTTTTTAAAGTATGATGAAATGCTTTATTTCAAATGTTGTTTGGTTTACATGTGCATTAAAACATTGCTTTTAATTTCACTGTGAGAATTCTTCAGCTCTAGCTTTTCAGAAGGCACGTTTTGGCAGAGTGAATTACTATATGAAGTAAATA EMBV3_15583 GTCCTCAACGTGCCCCCGTACTGCACAGAGGGTTTCCAGGTGGCCTACGTGCTGTTCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31826 GTGGAACTCATAGGCCAATACCACCAATAATGGGGATGGTCTAGTGCAAAAGGTGGCCAC Gene BVV0102_070215 - 0 NULL GK000016.2:12585795-12643617 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068678 TCONS_00068679 1 XLOC_041766 Coding TCONS_00068678 XLOC_041766 Coding Coding CDC73 16:12641193-12733853 = TSS51382 4758 1 TCONS_00068678_4 531 0.0485498108448928 17 0.948833896329552 0.000176691806652079 2.82735333047247e-05 0 3.29716827753072e-06 1.36777040840432e-05 1.48905152000932e-06 4.74806414191386e-05 0 4.4562308105566e-05 3.42500158711475e-31 0.000280529783177527 0.000143221916410567 3.97897022657579e-05 0.000307517337618009 7.1820556657586e-05 0.00303223153875408 4.83154317215774e-101 0.00484979849817658 5.42861015620086e-05 0 0 0.000631508983866587 0.00290283031751881 0.00232997064614029 0.000106931808536527 1.69660898416339e-05 0.000112784883408667 0.000270930383484138 0.000364291870470457 0.000999774233662452 NM_001191272.1 CDC73 Bos taurus cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (CDC73), mRNA. 0.0 4114 100.00 0.479192938209332 NM_024529.4 CDC73 Homo sapiens cell division cycle 73 (CDC73), mRNA. 0.0 4823 82.21 0.99957965531736 TCONS_00068678_4 sp|Q6P1J9|CDC73_HUMAN CDC73_HUMAN Parafibromin; 0.0 1091 100.00 0.998116760828625 1 coding 0 0 0 0 0.0767936266633022 0.488458151686877 0.0173677851289844 0.722716325836481 GGGCGCGGCGGCGGCGGCGGGGCCCGGGGCCGGCGGCGGCGAGGGGGGCGAAGATGGCGGACGTGCTCAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGAGATTGTGGTGAAAGGGGACGAAGTGATCTTCGGCGAGTTCTCCTGGCCCAAGAACGTGAAGACCAACTATGTGGTTTGGGGGACTGGGAAGGAAGGCCAACCTAGAGAGTACTACACATTGGATTCGATCTTATTTCTACTTAATAATGTGCACCTATCGCATCCTGTCTATGTCCGACGTGCAGCTACCGAAAATATTCCAGTGGTTAGAAGACCTGACCGAAAAGATCTACTTGGATATCTCAATGGTGAAGCATCAACATCAGCCAGTATAGACAGAAGTGCCCCTCTAGAAATAGGTCTGCAGAGATCTACTCAAGTCAAACGAGCTGCAGATGAAGTTTTGGCAGAAGCAAAAAAACCACGAATTGAGGATGAAGAGTGTGTACGCCTTGATAAAGAGAGATTGGCTGCTCGTTTGGAGGGTCACAAAGAAGGGATTGTACAGACTGAACAGATCAGGTCTTTGTCTGAAGCTATGTCAGTGGAAAAAATTGCCGCAATCAAAGCCAAAATTATGGCTAAGAAAAGATCTACCATTAAGACTGACTTAGATGATGATATAACTGCCTTAAAACAGAGGAGTTTTGTGGACGCTGAAGTAGATGTGACCCGAGATATTGTCAGCAGAGAAAGAGTGTGGCGGACGCGAACAACTATTTTACAGAGCACAGGAAAGAATTTTTCCAAGAATATTTTTGCAATTCTTCAGTCAGTAAAGGCCAGAGAAGAAGGGCGTGCACCCGAACAGCGACCGGCCCCAAATGCAGCGCCTGTTGATCCCACATTGCGTACCAAACAGCCTATCCCGGCTGCTTACAACAGATATGACCAGGAACGATTCAAAGGAAAAGAAGAAACGGAAGGTTTCAAAATTGACACTATGGGCACCTACCATGGGATGACTCTCAAGTCTGTGACGGAAGGTGCATCAGCCCGGAAGACGCAGACTCCTGCAGCACAACCTGTACCAAGGCCAGTTTCTCAAGCCAGACCTCCCCCAAATCAGAAGAAAGGATCTCGAACACCCATTATCATAATTCCTGCAGCTACCACCTCTTTAATAACCATGCTTAATGCAAAGGACCTTCTCCAGGACCTGAAATTTGTTCCATCAGATGAAAAGAAGAAACAAGGCTGCCAACGAGAAAATGAAACTCTAATTCAGAGAAGAAAAGACCAGATGCAACCGGGGGGCACTGCCATTAGTGTCACAGTTCCTTACAGAGTAGTCGACCAGCCCCTTAAACTAATGCCTCAGGACTGGGACCGGGTCGTAGCAGTTTTTGTGCAGGGTCCTGCTTGGCAGTTCAAAGGTTGGCCGTGGCTTTTGCCTGATGGATCACCAGTTGACATATTTGCTAAAATTAAAGCCTTCCATCTCAAATATGATGAAGTTCGTCTGGACCCAAATGTTCAAAAATGGGACGTAACAGTATTAGAACTCAGCTATCACAAACGTCATCTGGACAGACCAGTTTTCTTACGATTCTGGGAAACATTGGATAGGTACATGGTAAAGCACAAATCCCACTTGAGATTCTGAGTTACTTGTTTTCTTGCTTTTCTGGAAATCTGAATTAAGATGATAACACCGCGGATATACCATGATACACCATGCTCAAAAGACTGGGACTGAAGCTTTATGAATTTATCAAGAACTTAAAAATGAAGAAGGTCACGGATCGATCTTTTATAAAACCTTATTTGATGATTTATGCTTCAAAGGGATGATGCCTGTCATCCATATAAGCAAACTTTTTGGCTTACAACTATTTTTTTAATATTAGTCTTCTAGTCTGTAATGGAAATTGTATATTTTGATAGAAGTTTTTTCTCCATTGGTTACATTAGCATCACTTAAAATTTGTTTCTCTAGAAAATAAATACAGGTTACAAATGTGTGTATATGTAGAGGTTATAAGGCTCTCTAAGCCATCTTGCTTCTGATTTTTCATTGCTCTTTAATTCCTTTTATTGAAAATACTATGTTATGAATGGTATTAAATTTTAGTCTCTGAAACTTCAAAAACCAAGCAAAGGGATGTGACTTTTGAATGAGTCAAAATGTCAGCCTGTATGTGTACTATACTTTCTCTTTATTTAAAAAGGAATAATGAAAAATCAAGAACAGTTCTTCAGCTTTGGTTGAACTGTTCAGTTTTTCAAGACTTCTTTACTTATAATGAATACATTTAATGAATGTACATTCTTCTCACTGACTTTGGTAATTTTAAAACTTAGAGTGATATATTTCTATCTGTGATATCTTTCCACTTGAAAAATCTCAAAACACAAGATTAAAAACCTAATAGGCTATAATACTTTTTATTTTGGGAGCCAGAATATGATTCGGGGGAAAGAAATGTGTAAGTCCTTCTGCAGTGTAACTTTATCTTTTCTCTTAAGTCCACCTTCAATTCTTCCTTTATATGGTATAGGATTTTGCGTCTTCTATTTCTAGGCATGTTCTTATCTTCCATTATCTTTAATATTGATAACTCTCCCAGACACCAAAGAACATATTTGCTTAATTAAGTGTCTGAACAGAAACAAGATGAAAACACTGGTATTTTTATGTGTGTATTCAATATCGTATAAAATATAAAACCTATATTTTAACTTAGTAAAATATTTTACTACTTCTGTACTTTAGACAGAGTGTTGCCTCCAAGGTACAATGAATGAGCATTTTTCTTGAGTCTTGATCCATCTTTTATTCCTTAAAAAGCAACTTGGACCCTTTACTCCCCTAAAGAGTTTTTACCACTAGAATTGTTGCTGATCATTCATCTTATGCCATTCCGGTCCTCCCCCTCCCCCGACATTTAGCTCCTTTCTGGGTTAAGCTGACATTACCTAGCCTCATTTTGAAACTTAATGCTGTCATAAAAATGAGAAGCACTTATTATTTATTTTTTAAGTAACCACAAAAGTCCATGTCAGTAATGAATAGGAAAAGTATTTATTCATATGAAATTTACTAGGTTCTTCAGGAAAAAAGCGGTCAGCATTTTAAATTATTAGGATTTAGGATATGTATAAGATTTGAACAGATTGTGCCCCGCCCCCCACTTCTTACCTTCTCTGCATCCTTTCTTCTTGAAAATTCAAATTTGTTCACATTAGAATTTCTCAGTATATAAATTGTTTTCAAAATAAATTATGTATTGTATGAACTTTCTCCATGATGAAATAGTCAAGGACTAGAATCTGTAATATTTTAATGTAAGATTACTTGTTAAGACTACTACAAGTGGACATGAACTACCTTTCTATAAAGATTTTTAGTATTTATACTTATGTATGAAATTTACTTTTACAGAGTGTGGTTATAACTCAGAACATCTACTTTCAATAGGGTTTATTTTTCTATCTTGAATTGCCTTACTTGTATTCAAAGGCTCTGGAAATCATTAGGAAAAGTACAAATATGCTATTTCATGTATCTTAAACTCGGGTAGACCCTTAATACATACTTAATTTCTTTTCCTTTTTTAAAAATTCATTCCTTTGTCTAGGTCCATGGAATTCATTTTATAGCCATTAGTTCTAAGGGAAAAAAAAAAAAGACCAAGCTTCTGGCCAGTCACTCTTCCTCTGTCATGACTCCAGGTCCTGTAGCAGTGCCTGTCACAGTGCCTTGCGCATAGTAGGCATTCAGGAAACGTTCTGTGCATGAATGAGTGATGGAGTTTCAGTATAACTGGTTTATTACAAAGCATTGACTTTACTTGATCTTGGAGCTTAAAAATATAGAATTACAGTGAATGAAGACTCCTATGCACATATTTTGATGGAAATGAAATACACATTAGTAAGCTTGATTTATCCACAAGTAACTGGAGACACCCGTGTCTTGTCCCACCAGTAAAATAAAGCTCCTTTTCTTCATTCATAGGGTACCTTTCTGAGTCGGGCAACAATCAGAAGCTTGTGGGTTTCCATCAGCAGCTCTCAACTCTGACTGTATACTAGAATCACTTGGGGGCCTTTAAAACATTCCATTACCTGAATCCTGTTTCTGATTTTATTTGTCTGGGATGAGACCCGTTCATCAGTATTTTTAAAAAGTCCTTCAGGTAATTTTATGTTCAAAAAGGATTGAAAATCACTGGTTAAATATGAAAACAATTAAATATTGTGTCGTCTCCTCCTTTTTTTGTTTTTGTTTTTTTCTTTTGTGGCCACCTTTTGCACTAGACCATCCCCATTATTGGTGGTATTGGCCTATGAGTTCCACATGACAAATTCAAGTCTTATTTATTTAATGTAGGAATATTTTGTTTAATATTTAAATAATGTTTAATATATTTCCTTATAAACTAGTCTTATACTTTATGATTTGTTTCCCATGTATCCATCCTTTACTAACTTTTTCTTTCAACAGCAGTGTGACAACAGTCCAAAAGAAATAACTGATTCATAGAGGAAAATTTCATAATTTTTAAGGTAGAAGGAAGTAAAGTATTAATTTCTTATCTGCCATGCAGAATTAGACAAATAGAGTTTGCTTATGAAAGGAAAGAGGCATACTTTTTAATTGGTCTACACAGAAAAGTAAAAGTAAATTATTCATTTAAATAAGATTCATTATCTAATGAACATTGAAGGAAATATTTTTCCTAAATAAAAAATATTGTGACTCCTAATAA EMBV3_13450 CCCAACTTAACAGCCAAAACACAACTCCATGCTTAATTTTGTTGGAAGGAGCCTTTATTG Gene BVT0102_411436 - 1 EMBV3_01732 GK000002.2:37929696-38090773 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23756 CCCCCCGTCAAGCCTTTGGCATCATTATCCTCATCACTAAATCCTACAGAGTACAGGGCG Gene GeneID:613677|LOC613677:XM_002685367:267_cdna Constitutive 0 NULL GeneID:613677 2 GENE LOC613677 NULL similar to mCG124345 EMBV3_25484 GATACAACTCGTGTCATCTGGTTCCACAGGCAAGTCTTTTTCTTCTGCATCAGGCTGCCC Gene BVT0102_116227 - 1 EMBV3_26956 GK000008.2:100682000-100848106 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04570 CAGTAAGTTTGCACTGCCCTACATCCGTGATGTGCCCTGTATGCATCTGAGGAGGAGATT Variant GeneID:504914|UROD:XM_002686429:405_cdna 766^970 2 EMBV3_33277 GeneID:504914 3 GENE UROD NULL uroporphyrinogen decarboxylase EMBV3_19936 GCCGCGACCAAGTCATGGCTGAGACCTACGAGCTAATGTTCCTGGAAACAAGCGCTCTCA Variant GeneID:616314|RAB4B:NM_001128507:754_cdna 116^357 1 EMBV3_25557 GeneID:616314 18 GENE RAB4B NULL RAB4B, member RAS oncogene family EMBV3_38935 GGGCCCCCGGCACCACCACGGTTACTACCGGGGCTCCGACTACGACGAGCCAGACGGCCC Gene GeneID:282648|CACNA1A:NM_001075129:7_cdna Constitutive 0 NULL GeneID:282648 7 GENE CACNA1A CAV2.1 calcium channel, voltage-dependent, P/Q type, alpha 1A subunit EMBV3_04069 GTATGAGTTCTTCAAATACCTGATCACTAAAAGGCAAGAAGAGTGGAGGGCAGGCAAGTG Gene GeneID:538529|SLC25A28:XM_002698424:381_cdna Constitutive 0 NULL GeneID:538529 26 GENE SLC25A28 NULL solute carrier family 25, member 28 EMBV3_23783 TGCTGCTGGGCCGAGCTGGCATTCACACAGGGATTGGACTCGTGCTCCAGGAGCTGCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27105 AGGCACGTGGAGAATCTTCTAATCTGTGTAAAGGTCATTTGCCCAAAAAGGTGTGGTCAC Gene BVT0102_070188 + 0 NULL GK000013.2:57122212-57136890 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043162 1 XLOC_025865 Coding TCONS_00043162 XLOC_025865 Coding Coding PPP1R3D 13:57120339-57124048 o TSS31967 3709 2 TCONS_00043162_1 299 1 0 0.000937979744603948 0.000820659704162896 0.000820242578696275 0.000613512447191567 0.000839469943053515 0.000210761041053813 0.000457362474380357 0.000843375428519189 0.00123613934078109 0.00022980263571176 1.96497806195162e-06 4.83095713998467e-06 0.000175183027888821 0.000283822219281924 6.54822693017871e-05 0.00032044230934245 0.000282001467421143 4.73540664668503e-05 0.000657447882533187 0.000330874848440442 0.000149041307612209 9.20330495646029e-05 1.41801105207519e-05 0.000110739205995406 0.00084108359840332 0.000585678474441664 0.000843265497455766 1.23392181118202e-11 1.88850266485957e-06 3.4570273650926e-06 XM_005214936.1 PPP1R3D PREDICTED: Bos taurus protein phosphatase 1, regulatory subunit 3D (PPP1R3D), mRNA. 0.0 5618 100.00 0.839579401455918 NM_006242.3 PPP1R3D Homo sapiens protein phosphatase 1, regulatory subunit 3D (PPP1R3D), mRNA. 0.0 1162 87.81 0.249662981935832 TCONS_00043162_1 sp|O95685|PPR3D_HUMAN PPR3D_HUMAN Protein phosphatase 1 regulatory subunit 3D; 0.0 528 88.29 0.996655518394649 1 coding 0 0 0 0 -0.439772313465788 0.316622922046597 -0.0163217638519514 0.742038857884818 CGGAGGAAGCCCAAGGCCGCCGCCGCCACCCTGCGCTCCGCTGCGGCCCCGAGGAGCGTCCGCGCGAGCAAGCATTTGTCCTGGAAACCAGCTTTTTTTTTTTTTTTTCTTGCCCAAAGCGGAAAACCAGGGGGAGGACTCGAGGGACCAGGTGGCGGACGTGGGGAGCGCGCAGCCGGCCCACTGCGTCCTCTGCACCGGCGGTTGCAGCGGACCCTCCCCAGGGTCGCTGAGCACGTCCCGGGACACCAAAGGAGCGGACGCAGGGTCGGGAGGGAGACCGCCCTTCGGTTCCGCCTCCTCATCTCTCGACAGTCGGCCGGGCCATGTCCGGAGGCCCGGGCTCGGCGGTCCTCCCCGCCACCGTTGGGTTCCGGAAGCCCGCCCCGCGGAGCCTTAGCTGCCTTTCTGACCTGGACGGCGGCGCGGCCCGGGAGCCGCGGCCCTGCCGGCCCCCGGGGAGTCCGGGCAGCGCGCCGCCGCCGCCGCCTGCGCCGTCCGGCTGCGACCCCCACCTACGGCCCATCATCCTGCGGCGGGCGCGCTCGCTGCCCAGCTCGCCGGAGCGCCGCCAGAAGGGCGCGGGCGCTCCGGGCGCTGCGTGCCGACCCGGCTGCAGCCGGCAGCACCGCGTGCGCTTCGCTGACGCGCTGGGCCTGGAGCTGGCGCAGGTCAAGGTGTTTAATGCGGGCGAAGACCCGTCCGTGCCGCTGCACGTGCTGTCGCGACTCGCCATCAACTCGGACCTGTGCTGTAGCAGCCAGGACCTGGAGTTCACTCTGCAATGCCTGGTGCCCGACTTCCCGCCTCCCGTCGAGGCCCCGGACTTCGGCGAGCGCCTGGGGCGCCAGCTCGTGTGCCTGGAGCGCGTCACCTGCTCGGACCTGGGCATCAGCGGCACGGTGCGCGTGCGCAACGTGGCCTTCGAGAAGCAGGTGGCCGTGCGCTACACCTTCTCAGACTGGCGCAGCGCGCACGAAGTGGCGGCGCGGTGGCGCGGGCCGGCAGGCTCCGGGGGCTCCGAGGACGTCTTCGCCTTCGGCTTCCCGGTGCCGCCCTTCCTGCTGGAGCTCGGCTCCCGCGTGCACTTTGCGCTGCGCTACCGTGTTGCCGGAGCCGAGCACTGGGACAACAACGATGGCCGCGACTACAGTCTCACGTGCCGCAACCACGCACTGCACATGCCGCGCGGGGAGTGCGAGGAGAGCTGGATCCACTTTATCTGAACTTCCTGGCGGGGCTCGCGCGTCTGGGAGGTGGCCCTGCCTCACACCCGACCCCCAAGCCGGGGCCGTCGGACCTTGCTTCCCGCAGCTGCAAGGTGTGCTCGCTGTGGCCCGCCTATGCTGTCTTTTACTTGAAACGTCTGGCTCACTTGGTCTAAACCGTGGCCTCCGATGCCAGAAGGCTGGGCTGTGTCATGTGCTGGGTGGGGTGCTGGGTGAGTAGATGCACCAGTGAGTTGGCCCTATGAAGAAGGCCCAGGCAGGTGGTTTTGGAAAGGCCTGCACCCTTCACTGGGAAAGCCTGTGGCTTTTGCATGTGTCCTGATCGCGTCTCTGTGAATATAGCTCTTATTTATCATCACTGCGATGTTGAAACCTTTTACCCTTAGCCGATGCCTTCTTGGGAACATTCTGAATTCAATAAGCTAAAAAAAAAAGTCATTCTTGTGTGTGTGTGCCCACTGTAAACCGAATGTATATGCTGTGACCCCCATCATGGTCCCTTGAAGCATTCCTGCCCTGGGACAAGGAAAACCTGAAGTCACATTTGCATGCCAATGTCTGTAGGCTTCTAACAGCGGGGAAACTATTAATAGGCAAGAAATTGATGCCTCTTCGGTCATCATACAATCATTCCTGGGAGTTCAGGCTGCCCCATTAGGCTGTGTCTCCTCCATCAGCAACTGCCAAGCAGGAAAACACTTAGAACTTTTAGTTTGCAAAACAGCCCCTTCTGCAGTGTTTCTTTGCACTTTATGTATTTTATTGTACATGTTTGATAATTGTGTATCTGCACTTTATCAGGCCACTCTGTTTAGGTTTGAGCTACCTAAGTATTTAAAGAAATTCTGCCTTAAGTTATTTCAGTTTTCAGGCAACTCTGTGGAATTTGGGCAACAGTGCCCTTTGCAGTTACCTTTTTGACGGTTATGGTGACTCTCTTGATGTCTTCTTAAGTGTCCAGGGTTCCAGCAGTCATCATTCAGAAGTCACATTATCAAGTGGAACTAGCAGGTATTTTCAGCAACAACAAGACTGGAGGAAAAACAATACACAAATACTTATACATTTTAATTGTTTTAAGCTGTATTTGTATATGCCTGGTTTTATCAACTACCTGCCAACTTTCATCTTTGTGCCTTCAGATAGATAACTTTGTAACCTTGTCTGGACTTGTTTTCCAATTTTAAAATGTTAAATGCTTTTTTAATTTTTAATTTTCCAACCAAGAATTCAAGGCCATTGTCTCCTGCAGAGTGCCACAACAACTTAAAACTCTTAGCAAGGGGCTATTTCTCTTGGTGCTGGTGGTGGTCTGACAGCAGGTGCTAACACAGAGGTGTGAAAACCCAACTAAGGTAGATGTGGTCTCCAACTTGGGAAGCTGGTTTCCAAGAGCTGAAGCCAGTGTGATAAATCTTGTAATAGCTGTTACCAGTGAATTAACTCTAAATATTTGAATGCTTGTTACCGTTTGTCAAATAAGTATGCAAAGGATGCATTTTGCCTTTTAACCAATTTCTTTTTTTATAATGGCAACTTCAGTGTTTTAAAAAATTCCAGCAACAAGGATGGCTTTTTGGTACTGGTCTAAGAATATGGAACTCTGATTTAAAACATTGTGACTGAATTGAACAATCACTGGCGGTTAGCACTATGTACTCCATTGACATGCAAGAGGCAAAGAAGCCTGGTCGCATTTCCAAGCCCATGAGGGCCTCGGCCACTATGCCCTGGATCCTAGCCCAGTATGCAAAGCAGTTGTCCAGGGTGTTCACATATGAGCAAGAGCTGGCAAATATATTGCTATGTAAAGGCACGTGGAGAATCTTCTAATCTGTGTAAAGGTCATTTGCCCAAAAAGGTGTGGTCACAGAATATGTAGTAAATGTTATATCTTAAATATTAAAAGAACCTCCATGTGCCTTTGAATTAAAAACTTTAAAGCTTAAATATGCCTGCCTAGTTAATAAAGAAGCTTTGGGACAGCTTAAGGAGATTTTCAGGCCTGAAAACACAGTGACATAGCCTGGATATTCAAGTTTTGTTGTAACCTGTGCAATTGTTGGGTCTCTCCAAACATATTTTAATTCCTGCCATTTAAGATGACTTCACCTAAGCCTCACTATTAAAGTATATGTGCACAAGTTGTTGAAGTGTGTTTTTCTTGTGGCCTGATTAGTGTGAAACAAGCCTTTAGAAATGTGTTGATTAAGACATTTCACATGTCTTATCCTTCCTAGAATGCTGTCACATTTAGTATCTTGCCAATATAAATAAATGCATTTTATGATGGCATCTGGGCTTCAGCAGCACAGTCATGTGTATCTTTGAGAAACTGAGATGCATCCTTTTATGCCAGGTCAGTATTACATAGGAAGAAAGCTCTAGGAAAACACAGGGGATGGAATAGTTACTGTACTTCATCTTACTGCTTATTGAAGCCCATGTAGGAATAACTACATGAGTATCTTCACCACCCC TCONS_00043163 s 5' 0 TCONS_00043163 s 5' 0 EMBV3_29067 CAATGAAGTCACTCCAACTGAGGCTGCCCAGCCCCCCTTTCCTGCCCGAGGCTCCGGCTT Variant GeneID:617005|MRPL38:NM_001035489:38_cdna 628^792 1 EMBV3_29709 GeneID:617005 19 GENE MRPL38 MGC127321 mitochondrial ribosomal protein L38 EMBV3_22048 TCAGCTGGATGATCGCACAATCAGTCACGGCAGTTGCTGGGTTGACTTCCTATCCATTTG Gene GeneID:282479|SLC25A5:NM_174659:8_cdna Constitutive 1 NULL GeneID:282479 X GENE SLC25A5 NULL solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 EMBV3_01064 TCGCTCATTAAGTCCGAGCCGAGCGCGCGACCGTCGTTCAGCATCGAGAATATCATCGGA Gene GeneID:532383|FOXD3:XM_002686341:90_cdna Constitutive 0 NULL GeneID:532383 3 GENE FOXD3 NULL forkhead box D3 EMBV3_36329 CCACTCTGAAATTGGAGATGATGCAGGGAGGTAGGCTAAGTTCCCAACAGCTTTACAGGG Gene GeneID:100125278|ZNF774:NM_001103325:48_cdna Constitutive 0 NULL GeneID:100125278 21 GENE ZNF774 MGC138916 zinc finger protein 774 EMBV3_22228 GAAGGGCCCCCCACTTAGGGCAAGAGCCATGTGTAGTTCCACTTCTCAGGATAAGACTAA Gene GeneID:507197|SHMT2:NM_001034282:956_cdna Constitutive 3 NULL GeneID:507197 5 GENE SHMT2 MGC128707 serine hydroxymethyltransferase 2 (mitochondrial) EMBV3_29411 AGTAAACAGGGTGCCCTGTGGAACCGGGTGGCCCAGAAGAGGCGGTATTCTCCGGGAGTC Variant GeneID:539289|LMAN2L:NM_001014953:89_cdna 315^515 3 EMBV3_18596 GeneID:539289 11 GENE LMAN2L MGC129002 lectin, mannose-binding 2-like EMBV3_02443 ACCGGGAGTCAGACGAGTTCCCAAGACAAGGCCCTCCAAACCACCACAGCCAGTCGACTC Variant GeneID:100138541|ODZ2:XM_002689363:16_cdna 227^712 1 EMBV3_37853 GeneID:100138541 7 GENE ODZ2 NULL odz, odd Oz/ten-m homolog 2 (Drosophila) EMBV3_43190 AGGTCCTAACCGGTCCATCCCTTCCCCCACTTTTCAAGCCAATCCCATGATGTCGTTTCT Gene GeneID:538496|CACNG3:NM_001078014:374_cdna Constitutive 1 NULL GeneID:538496 25 GENE CACNG3 NULL calcium channel, voltage-dependent, gamma subunit 3 EMBV3_42029 CAGGCAGGTGACTGAAATTAATGAAGCTGACTAAATGGGGCTTGGCGGTAAGCTAGAGAC Gene BVV0102_217126 + 0 NULL GK000019.2:21541923-21695303 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04038 GTTCCCACCCTCTTGATGGAAATCTCACGATGTTGTGGAGTGGGGGGCAAAGGTCTAAGT Gene GeneID:617165|COTL1:NM_001046593:65_cdna Constitutive 0 NULL GeneID:617165 18 GENE COTL1 MGC137989 coactosin-like 1 (Dictyostelium) EMBV3_09590 TGTGGTACAAGCTGGACGAGCTGTTTGAGCAGGAGCGCAACGTTCGCACAGCCATGACCA Gene GeneID:511446|CXXC1:NM_001024517:80_cdna Constitutive 0 NULL GeneID:511446 24 GENE CXXC1 NULL CXXC finger 1 (PHD domain) EMBV3_42920 AGCACACGCCCCTGGTGATGCTGGGCATGGGCTTTCATCCGGCCATTCCGGGAGCATCAC Variant GeneID:507694|TMEM189:NM_001100315:928_cdna 170^261 2 EMBV3_27074 GeneID:507694 13 GENE TMEM189 NULL transmembrane protein 189 EMBV3_01314 CAGAACTTCAGTGATGTTTGTCATGACACCTTCATGTGTACCAGTAGTTCTTCCCATTGT Gene GeneID:530027|MAN1A1:XM_002690078:5_cdna UTR3_Alt 2 NULL GeneID:530027 9 GENE MAN1A1 NULL mannosidase, alpha, class 1A, member 1 EMBV3_04879 CCGGAACTACGGCTCTGGCCTTCTTCAGCTCCAGCGTCAACCCGGTGCTCTACCTCTTCA Gene GeneID:513386|LTB4R2:XM_002690535:578_cdna Constitutive 0 NULL GeneID:513386 10 GENE LTB4R2 NULL leukotriene B4 receptor 2 EMBV3_05937 GAAACTCCAGAGGCAGATGCCAGCACTCACTGGAACTGCAAGTAAGCAAATAAGACACCC Gene GeneID:530270|AGPHD1:NM_001099047:112_cdna Constitutive 0 NULL GeneID:530270 21 GENE AGPHD1 MGC148433 aminoglycoside phosphotransferase domain containing 1 EMBV3_26896 CCAGACACAGCGCTTTCGGCTGGACAACTTGCCTTTCGGGGGGTGCAGCGGGCGCCGGCT Variant GeneID:520376|ELAVL3:XM_002688873:250_cdna 867^940 3 EMBV3_34203 GeneID:520376 7 GENE ELAVL3 NULL ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) EMBV3_03253 TGGGGGCTCCAAAGTGCTGTTCGTGCAGGTAGTGTGATCACCTGACCTACTGCTGAGCCA Gene GeneID:791049|MIR93:NR_030962:362_cdna Constitutive 0 NULL GeneID:791049 25 GENE MIR93 MIRN93 bta-mir-93 microRNA mir-93 EMBV3_39229 AAGTGGTCAGCGAGGTGAGTGGTGTGCAGGACCAGGTGCTCAGGGACAGGGATGCCAAGA Gene BVT0101_041575 - 1 EMBV3_14863 GK000025.2:996279-1006911 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16205 GAGGCTCATTTTCTTAATATGGGTTCCTTCGTTTCACAGCCCCTGGAGCCGGTCAAGTTC Gene GeneID:767934|MGC127919:NM_001077007:2_cdna Constitutive 0 NULL GeneID:767934 8 GENE MGC127919 NULL hypothetical protein MGC127919 EMBV3_01111 TTCTGCCCAGTGCTCCACTCCCACAGAGCATTTTCCTTCAGGTCCAGCAGTTTATCCACT Gene GeneID:506054|LRRC3:NM_001098884:14_cdna Constitutive 0 NULL GeneID:506054 1 GENE LRRC3 MGC165823 leucine rich repeat containing 3 EMBV3_20431 GCAATGAGCCTACTCTGGTTAAGGTGTTCTATTCCTCAAAGGTGGCCTTGTGCCATGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07646 GGAGCCTGTCCTGCCGCTTGTCTTAACTCTGAATGTTTCTTCTCAAAGGTGCTAAAAGCC Gene GeneID:282380|DYNLT1:NM_174620:22_cdna Constitutive 0 NULL GeneID:282380 9 GENE DYNLT1 MGC134363 TCTEL1 TCTEL1 protein EMBV3_09169 CAACAGCAGGTAGCTAAAGAAAATCAGCAGCCCTGAGAATAGGTCATCTCTTGGCCCGGA Variant GeneID:512506|RANGRF:NM_001037460:18_cdna 471^556 4 EMBV3_06595 GeneID:512506 19 GENE RANGRF MGC133973 RANGNRF RAN guanine nucleotide release factor EMBV3_03112 TACTGTTCTGGTCCATATAAAAATAGTGAACAGGTAGGCACATGGAGAACTATGCAAGAG Gene GeneID:785042|HOOK1:XM_002686350:18_cdna Constitutive 0 NULL GeneID:785042 3 GENE HOOK1 NULL hook homolog 1 (Drosophila) EMBV3_12007 GAGCAGCCCTTGTTCTGAAGCTGAGTGGAAAGGGCATCCAACACAGTAGAGTTAATGCTG Gene GeneID:789836|ZNF583:NM_001083534:70_cdna UTR3_Alt 1 NULL GeneID:789836 18 GENE ZNF583 MGC148707 zinc finger protein 583 EMBV3_03197 TGGCCTCTGAACTGACGCTATGTTGGAAGGAAGAGGCGACAACTTCAACGATGTGAGCAC Gene GeneID:100294797|LOC100294797:XM_002691804:448_cdna Constitutive 0 NULL GeneID:100294797 12 GENE LOC100294797 NULL hypothetical protein LOC100294797 EMBV3_15411 GGTCACTACCAGGTATAATCTCCAGGAAGGGTGTTGTCCTTTCTCTGCTTGAACCATGGC Gene BVT0102_046846 + 1 EMBV3_04090 GK000008.2:81512052-82096667 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226013 1 XLOC_137904 NonCoding TCONS_00226013 XLOC_137904 NonCoding NonCoding - 8:81540248-81550834 - TSS169079 1213 2 TCONS_00226013_4 55 0.0544105523495466 2 0.885592820028342 5.60827608084821e-05 0 3.81450512223672e-05 0.000177994325412274 2.03511727319853e-05 5.89786315100826e-05 4.8076757871182e-06 0.000234053305157772 9.75697587864348e-05 0.000244223953010881 0 0 2.36544294215109e-06 0 0 0 0 0 0.000149763884444372 0.000160073173959411 7.50798566123999e-06 0 0 0 1.71355661116851e-05 0 8.69453078687747e-05 1.58370581529989e-05 0 0 XM_003582318.2 FAM184B PREDICTED: Bos taurus family with sequence similarity 184, member B (FAM184B), transcript variant X1, mRNA. 3e-28 131 89.69 0.0791426215993405 0 noncoding TTCTTTAATTAGATGAATGATGACTGGATATGGAATCTTCAACAAAATATTTCTTGATATTACTGTAACTTTCTTATCCCAGAAAGGGACCATCTTAGATGATTCTTGGATAAGAATTTGAATTATTTGGCCATATCAAATTGGGTGATAAAAATGTGTAGAGTTAAAGGAGTGAATTGACCAAAGCTATATGGTCATTTCTGCAGATGGTAGAGAGGACAATGGAGGAGGCAGTTGGGATTCAGGGGTGGAAGTCTTAGTGCTCTGTGTGGCAAGTGAAAGTCCACTGTGAGAGAGGCAGTCTGATCATTATTCCTCTTATTTCTTGTAAGTTTAGGTGATACTGTCTCTGAGGCTTAAGGTATGTCCTTGTGATACATGTCAGTTCAACTCAGTGTGCCTCCATCATGTGAAGAGGGCTAGATGGCTAGAGAGCTATATTCTACAAGACTTAAAATGTCAAAGACCAGCAATCACGATTCCCTCCTAGTGCCCCCTTCCTGCCAGAGAGCATTCTGAATTGGAGGAAGTATAGTGCTGGGTGGGAAAGAGGACAGACCCTAGGAGGGGCCTGTAAGGAAGATGGGTTTCCCCCAAAGTGTGTGGAGTTTAACACCATGGAGATTAGGTGAAGAAATCATTGAGAGAGGTGTAAGTTAGCAGGCCAAGGTTGAGTATGTCCCCAAGGATACCCTTTGTGAAGATGCTTTTCCTTCCAGTTATGTGTGCTTTCTCCTCAAACTATGGGAGAAAATGGATTTAGAGTACAGTTATAATTTTTCTCTTCTAGGATATAGTTATCTTGCATATCCTTCCTTTATACCTGCAGGAAAGTCTGACCACCCCTTCAATCTTAAGTGATGCCCAAAGTGGAGAAGAGGAAATAGGAAAATGAGGGAAAGCATGGACATGTATCCAATCAGTATCCTAGCCCAACCAGGAGCCATGGTTCAAGCAGAGAAAGGACAACACCCTTCCAGCAGATTATACCTGGTAGTGACCATCAGGAAACCAAGGTTCCCCGAAGGATGGAGCCATTGGGAGGAGCATTCCAAGTAGACATCCATAAACATTCTGTTATACTTCAAATAAAAAAAAGAAAATTCCAGGAGATAGTGAAGGACAAGGAAGCCTGGTGTGCTGCAGTCCATGGGATCGCAAAGAGTTGGACATGACTGAGCAACTAAACAACAAAAATAGAAATAAGATGGAG TCONS_00228416 r 5' 28162 TCONS_00228416 r 5' 28162 EMBV3_17869 GAGGTCTGTATTGCTTACACTGTCATTTAGCCACCAAGAATTGCTTCATTCATCTATTGG Gene GeneID:505890|ADAMDEC1:XM_002689785:8_cdna Constitutive 0 NULL GeneID:505890 8 GENE ADAMDEC1 NULL ADAM-like, decysin 1 EMBV3_38617 ATGTCGAGTGAAGGGCGGGGTTTCACTTTCAGCAAGGAGACAGATCCTTGGCTATGAAAG Gene BVT0102_096892 - 0 NULL GK000016.2:4101890-4110122 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066669 TCONS_00066672 TCONS_00066661 TCONS_00066667 TCONS_00066670 TCONS_00066668 TCONS_00066671 TCONS_00066662 1 XLOC_041238 Coding TCONS_00066671 XLOC_041238 Coding Coding SRGAP2 16:4025330-4104752 j TSS50308 5839 1 TCONS_00066671_3 918 20 0.926732224474635 4.92387893291295e-09 0.000234699274750925 1.13057604611373e-09 1.74017134995319e-21 2.30444040000454e-23 2.17552235754563e-05 4.96320757674388e-40 3.18561827290232e-26 0.000386802408965537 4.84185786534915e-05 4.21785985200476e-66 3.12858755754828e-16 4.12315300148603e-13 0.000165172620103399 2.02139791720751e-11 4.93714296373835e-15 4.59906910294646e-07 2.20301397872079e-14 1.64888588985799e-09 1.12177235457393e-08 7.67142972366535e-05 0.000165956911156277 0.000576610142805669 2.33458303829984e-49 1.4670133470145e-15 8.36960469453727e-05 1.65674256392178e-87 5.72734953736006e-10 7.65102189550294e-08 8.50500520248001e-82 XM_005216678.1 SRGAP2 PREDICTED: Bos taurus SLIT-ROBO Rho GTPase activating protein 2 (SRGAP2), transcript variant X1, mRNA. 0.0 1.048e+04 100.00 0.994862133927042 NM_015326.3 SRGAP2 Homo sapiens SLIT-ROBO Rho GTPase activating protein 2 (SRGAP2), 0.0 6780 85.93 0.99554718273677 TCONS_00066671_3 sp|O75044|SRGP2_HUMAN SRGP2_HUMAN SLIT-ROBO Rho GTPase-activating protein 2; 0.0 1889 98.37 0.998910675381264 4 coding 0 0 1 1 -0.0986088445134338 0.409627122072629 0.0491989967360157 0.33381234470851 GCTCATCCCACCTAACTATTGCTAAAGTAAAGAAGTCGGCCAGCAGCTCCAAGACGATCTGATGAAGGTCCTGAATGAGCTCTACTCGGTCATGAAGACATATCACATGTACAATGCCGACAGCATCAGTGCTCAGAGCAAGCTAAAGGAGGCGGAGAAGCAGGAGGAGAAGCAAATTGGAAAATCTGTAAAGCAAGAGGACCGGCAGGCCCCACGCTCCCCTGACTCCACATCCAACGTCCGCATCGAGGAGAAGCATGTCCGGAGGAGCTCGGTGAAGAAGATCGAGAAGATGAAGGAGAAGCGCCAAGCCAAGTATACGGAGAATAAGCTGAAGGCCATTAAAGCCCGGAATGAGTACTTACTGGCCTTGGAAGCCACCAATGCATCTGTCTTCAAGTACTACATCCACGACCTGTCTGACCTTATTGATCAGTGCTGTGATTTAGGATACCATGCCAGCCTGAACCGCGCACTGCGCACCTTCCTCTCTGCTGAGCTGAACCTGGAACAGTCAAAGCACGAGGGTCTGGACGCCATCGAGAATGCCGTGGAAAACCTGGACGCCACCAGTGACAAGCAGCGCCTCATGGAGATGTACAACAACGTCTTCTGTCCGCCTATGAAGTTTGAGTTCCAGCCCCACATGGGGGACATGGCATCCCAGCTCTGTGCCCAGCAGCCCGTCCAGAGTGAGCTGGTACAGAGATGCCAACAACTGCAGTCTCGCTTATCCACCCTGAAGATCGAGAATGAAGAGGTAAAGAAGACAATGGAGGCCACTCTGCAGACCATCCAGGACATTGTGACTGTCGAGGATTTCGATGTGTCTGATTGCTTCCAGTACAGCAACTCTATGGAATCCGTCAAGTCCACGGTCTCAGAAACCTTCATGAGCAAACCCAGCATCGCCAAGAGGAGAGCCAACCAGCAGGAGACAGAGCAGTTCTACTTCACGAAAATGAAGGAATACCTGGAGGGCAGGAACCTCATCACCAAGCTACAAGCCAAGCACGACCTTCTCCAGAAAACCCTGGGAGAGAGTCAGCGGACAGACTGCAGTCTGGCCAGGCGTAGCTCAACTGTGAGGAAACAGGATTCCAGCCAGGCAATTCCTCTCGTGGTAGAAAGCTGTATCCGGTTTATCAGCAGACATGGGCTACAGCATGAAGGAATTTTCCGGGTGTCAGGATCCCAGGTGGAAGTGAATGACATCAAAAACGCCTTTGAGAGAGGAGAGGACCCCCTGGCTGGGGACCAGAATGACCACGACATGGACTCCATAGCCGGCGTCCTGAAGCTGTACTTCCGGGGGCTGGAACACCCGCTCTTCCCCAAGGACATCTTCCACGACCTGATGGCCTGCGTCACAATGGACAACCTGCAGGAGCGAGCTCTGCACATCCGGAAGGTCCTCCTGGTCCTCCCCAAAACCACTCTGATTATCATGAGATACCTCTTTGCCTTCCTCAATCATTTATCTCAGTTCAGCGAGGAGAATATGATGGACCCCTATAACCTCGCCATCTGCTTCGGGCCCTCGCTGATGTCGGTGCCTGAGGGCCACGACCAGGTGTCCTGCCAAGCCCACGTGAACGAGCTGATCAAAACCATCATCATCCAGCACGAGAATGTCTTCCCCAACCCCCGGGAGCTGGAGGGCCCCGTCTACAGCAGAGGAGGGAGCACGGAGGACTACTGTGACAGCCCTCATGGAGAGACTACCTCGGCTGAAGACTCAACCCAGGATGTGACCACAGAGCACCACACCAGCGATGACGAGTGTGAGCCCATCGAGGCCATTGCCAAGTTTGACTACGTGGGGCGCACGGCCCGAGAGCTGTCCTTCAAGAAGGGGGCATCTTTGCTGCTTTACCAGCGGGCTTCCGACGACTGGTGGGAAGGCCGGCACAACGGCATCGACGGTCTCATCCCCCATCAGTACATTGTGGTCCAAGACACCGAGGACGGTGTCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTGAAGAAAAGGTGACAGCCAGAGCGGGGGCCAGCTGTCCCAGTGGGGGTCATGTAGCCGATATTTATCTTGCAAACATCAACAAGCAAAGGAAGCGGCCAGAATCTGGGAGCATCCGGAAAACATTTCGGAGCGATGGCCACGGGCTGAGCAGTTCCCTGACTGATTCCGCCTCCCCGGGGGTGGGGGCTAGCTGCCGCCCGTCTTCCCAGCCCATCCTGAGCCAGAGCCTCCCCAAGGAAGGGCCGGATAAGTGTTCCATCAGTGGGCATGGAAGCCTCAACTCCATCAGCCGCCACTCGTCGCTGAAGAATAGGCTGGACAGTCCACAGATCCGGAAGACAGTGACAGCAGGAAGGTCAAAAAGCTTCAATAACCACCGGCCCATGGACCCTGAGGTCATTGCACAGGATATTGAGGCGACCATGAACTCTGCCCTGAATGAGCTGCGGGAGCTGGAGCGGCAGAGCAGTGTCAAGCACACCCCGGACGTGGTTCTGGACACCTTGGAGCCCCTCAAGACCTCCCCCGTGGTGGCCCCTACTTCGGAGCCCTCCAGCCCCCTGCACACCCAGCTCCTCAAGGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGCACGGCGGGGGACATCGCCTGCGCCTTCCGGCCCGTCAAGTCTGTCAAGATGGCGGCGCCCGTCAAGCCTCCGGCCACGCGGCCCAAGCCCGCCGTCTTCCCCAAAACGAACGCCACCAGCCCCGGCGTCAACTCCTCCGCCTCCGCACAGTCCACTGACAAGTCCTGTACTGTCTGAGGGGCGTAATTTAATTATCCTAGACAGGGGACTAGAGGGACTGACTGTTATTAAAAACCTTCCTATTTAACTAGCTTGGGGACTTCAGTTGAAACTTAGGTTCTAAGTTGTTCTTGCCTTCCCGTCACCCAAAACCTTGAGAATGAAGCCCTCATTATCGCCCTGCCCCCGGCCCCCTGCTGCCCCCAGTCGCGGTAACCCAGCCAGCTACAGTACATGCAGTCCTTAGGTTAGCCGGAGATGGATCTGTCCGCCATCGGTCACTGTGAAGTCGGGTAACGCAAGTCAGGGGCCCTGGGCTAGCGGCTCAGCCCCCGCAGACACACGGGACGCCTAACCAGACGGCTGGCCGCCAGCAGCGGCTCTCAGTGGCGTCTTGTTTTGGGTACTGGTTATAAAGGATCATATACAGTCCATGCTCCGTTTTACACACACACACACACACACACACACACACACACACACAGGTTATAGAGGATCATATATAGTCCATGCTCCGTTTTACACACACACACACACACACACACACACACGTGGATTTTTCTAGTCTCTGGCATGTGTAGCCTCCCCTGGTTCTAGATAGACCGTCTCTTTGTAAGTTATTGTGGCAGTTCACACAGGAGCCACCAGGGGTCTCTGTTTCCGTTACAAATCTCATTCTGTTTGGGCCAGAGAACCTAGCCTTTGCAATCTCTCCATCATACGAAATTTAGCAGGATGGGACTGGATCCTGTAAACTGTCTGGGCTTGGCAGTTTCTGTCTTCTTTCTATTGGTGTGAATTGGTCATTGGTGTTTGCTTTTGCTCTCCTCCATTCTCTGGAACTACAACCCAATCTTATGGAACTTCTAAAGTTTTTCTGAATGTACAGACATTTCTCGGGGTCCTATCTTTGTCTCTGATGGACAATTTTCCATTTAAGACATCTTCCTGTATAAGACAGTTTTATAGTTGGTTCCTTTTAGGGTAAAGAGTCTTAAGACAGTTTTATTGTATTTGTGGCAGGTTTGGAAAAGGTAAGAAATGGGTCCTTCCTCCCACTTTTTTGGGTACTTAAGACATAAGATTTATTATCCTATTAAAAATTAAATTCAGCTTTGCTAATCCTAAAATCATTCCCAAATGAAAATTTATTCTAAGTTTACCCCCTAGTTGGGTCATTCTACGAGGTCTCTCTTCAGGGACCAATGGGGCTTGGGGAGCCCTAGTTAGATTAAAGAGAGACAGAGCCCTTTAAAACTGATCTCTGTTTATCCGGACAAGGACAACTAAGAGAACTCTGGCCCCGAGGGCTTTAAAGTCTTTCCAAGGCCTGAATCTAAGAAAATCAAAAATCGGATGCTGACTCTTGGACTCCCTTTGGCCTTTATGGTTCTCCGCCAAAAAGCAAAAATCTTGTCTACTTTAATCCCTCTCCAGATCTGGTGCCCACAGTCCCAGCTCCCCCAACTCTCCCAGCATCATGCTGTCCCAGGGAGAGCAGAGCTAGGGATGGGCACACCCCAGGCTCACGGGTCTCAGACGACTACTTGAGTTAAAGCTGAAACCCATTCCTCTTCTCTGTTTTCTGGTGTTTAAAACTGCGCTTTTTGCCTTGTTTTTCACAGCTTGGGAAAGATAGTGGGTTGCCATTCAGATAGGAAAATCTAAATTGTCTTAACTTTGGCCTAAAAGATCCTTTTCAGATTAACATTTGGAAGCTGGTAGTCATCTCTATGGAAAGCGGTAGGATTTTCCTCCTTCAGCGTGAAGGAAAAGAGGAGCTCTGTGGAAAGTTGCCAGTTAGAAAAGTAGCCTGCGGCATCAGGAAAATCATCCCGCAGGCCAGGATGGAAAGATGGAGTGCTCCTTCAGTGAGTGTGTCGGCCTGTGAGAGGCAACCCACAGTCCTCTGGATCCTCAGCTTCTTTGCTCTGTGTGGTGGCCTGTCCTTGTCTGTCACCAGAACTTATGCAGGCCCTGAGGCAACAGAGGGCTTTCATAGCCAAGGATCTGTCTCCTTGCTGAAAGTGAAACCCCGCCCTTCACTCGACATTCCTTCTGATCTGACTGGCCAAAATTGGTGCCCACACCTGCCCTTTTCCTTTTTTCCTGGCACGTCCTTCTCTTAAGAAAGAAAAGGCAAAACTTCCTTAGTGACAACACCTTGGACCTGTTCTGTTGCTCCTGCCTTAGGTCTCTTTCAGCCCTGTACCTGACGTGCGTTCACCATCCTGCGGTCAGGGTCCATCTGCTGATCTGCATCACGGACTAGACAGTGTGTGAGTGCTCATCTGCTACCCCCTCTCTGGGCACTGAGTTGTCTTCCCCTCTCTGGTGCTCCTGACACCGATGAGATGGTCCTGCCCTGAGGACTAGGAACCCCAGGAGGAGAGTCCTTCTCAGCAGAGCTCATTGCGATCAACTGGAATCGAGGTTACACACTGTGATTTTTACACCGAAAAGCCAAGCAGAGCTGGCCACCCAGGGTCTCGGGAGACCAGTCTTCCTCAGATTAGCTTCCTAAACCAGCATGATGCTTCAAAGAGCCCCACTCTGCCCCTGGAGGCCTGGATCCTTTTCCTGGTGTGGACTCTGATGGGTCAGTCTTTGGGACACAGGTGGGGTAGAGCTACCAGCATCCCAGTTTGGAAAAGAGAGGAGTTTGCAGCCAGCAGCCTGTAAACTGGAAACACTGGTCTCAGCCAACCTCCTCAGGGCGCCCTGGTTTCTCCCCAAAGAGATGAGGAGAGATGACGCCAGCAACAGGATGAACAGACCACTGGAAGGGCTGGTGTATACGTACTTCGTGTTCAGAAGAGAATTTAGATCTTCCAGGGAATTGCAATGTTGTGACGTCTGACTTGTATGTCACGTTTGTGTAAAATGGTATATTCTTTAAAATAGTGTTGATAACTGGAATATTGTATGTATGCTTGGAGATGCTTTGTGTGAACCTAAGACTGTCACTCAACAGATGTTGGATTGGGGAAAATCCAAAGCACAACTTCGAAATAAAATACATTTTTAGGTTTCGATGCT EMBV3_16437 TCATGATTGCCATGATCCCCATTCGCTACAACGTGCTGCCCCAAATCATTGAAGCCAAGT Gene GeneID:532407|SLC4A11:XM_002692386:299_cdna Constitutive 0 NULL GeneID:532407 13 GENE SLC4A11 NULL solute carrier family 4, sodium borate transporter, member 11 EMBV3_25426 TGGATGCGGAAAGCGAGTATCTGATCCAGCAGGCCATCCACGGCAACCTGCAGAAACACA Gene GeneID:529923|ABCB9:XM_002694479:323_cdna Constitutive 0 NULL GeneID:529923 17 GENE ABCB9 NULL ATP-binding cassette, sub-family B (MDR/TAP), member 9 EMBV3_26590 CATCCCCTGGCAGCTCTTCAATTACGTGGCGACCATCCCCGACAATTCCATAGTTCTCAT Gene GeneID:519047|LOC519047:XM_002696612:117_cdna Constitutive 0 NULL GeneID:519047 21 GENE LOC519047 NULL similar to KIAA1199 EMBV3_27018 TGCAGCCCTAAGCAACGTGTGTGTATTGGATAATTTTGTTGTGATGCTACTCACTTGGAT Gene GeneID:615798|PKIB:NM_001114518:14_cdna Constitutive 1 NULL GeneID:615798 9 GENE PKIB NULL protein kinase (cAMP-dependent, catalytic) inhibitor beta EMBV3_05751 AGCTGCTTAATTCTGCAAAGCCCCTAACCTGTGAGCCAATCCAGGGCTTCTCTGCTTTAG Gene GeneID:282088|TACR2:NM_174469:230_cdna Constitutive 0 NULL GeneID:282088 28 GENE TACR2 NULL tachykinin receptor 2 EMBV3_36551 GAGATGAAGGATATGCCAACTGATAGCCACTGCATGTATCGTGCCATCCAAGACCAGCTG Gene GeneID:532172|OTUD6A:XM_002700031:128_cdna Constitutive 0 NULL GeneID:532172 X GENE OTUD6A NULL OTU domain containing 6A EMBV3_06926 GCCGGGCAGACGCAACCCTACGAGGCAGAGACAAATAATGAGAATAATCAAAGTGGGAAG Gene GeneID:100137841|ZNF114:XM_002695193:875_cdna Constitutive 0 NULL GeneID:100137841 18 GENE ZNF114 NULL zinc finger protein 114 EMBV3_06230 GGGGCCTGGAATGGAAAAGTAGGAAGTCAAGAAACACAGGAGTAACAGGCAAATTTGACC Gene BVV0102_407813 + 0 NULL GK000001.2:15026685-15618910 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019139 1 XLOC_009819 Coding TCONS_00019139 XLOC_009819 Coding Coding - 10:8351995-8353190 - TSS13029 1195 1 TCONS_00019139_4 123 0.884518828451883 1 0 6.83131097531044e-05 0.000201809139757508 0.000100671061033482 8.33889514462381e-05 2.06576915789071e-05 8.98004456189135e-06 4.88008886886394e-06 4.45460384139471e-05 0 6.88618098682792e-06 0 0 0 0 1.09482593497844e-06 1.10509031205733e-05 0 0 6.60085347395137e-05 9.32780907668828e-05 2.5403617610586e-06 0 0 2.80579572543671e-05 9.85640412704736e-05 6.86439216280488e-05 9.07065521656481e-05 1.00472522434652e-06 1.53000470087771e-06 7.18738585310909e-07 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 0.0 881 92.06 0.513807531380753 0 coding AGAGCTGACTCCTTGGAAAAGACCCTGATGCTGGGAAGGATTGAGGGCAGGAGCACAGAAGACAACAGAGGATGAGATGGTTGGATGGCATCACCGACTCAATGGACGTGAGTTTGAGCAAACTCCAGGAGATGGTGAAGGACGGGGAAGCCTGATGTGTTGCAGGGCATGGGGTTGTAAAGAGTCAGGTACAACTGAGCAACTGAACAACAGCAATGACAACAATACCTAATAAATTGTATCCAAATACATAGGAGGTATAGTGGTTTATATTTTTACCCCAGGAACAGCTTCATTGAGTTCATTTCTGCATAGAAAGTCTACCATAAAATTTAATTCTTGCACTAACACCCAAAAAAGATGTCCTTTTCATTATAGGGGACTGGAATGGAAAAGTAGGCAGTCAAGAAATACCGGAGTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGGTAAAGGCTAATAGAGTTTTGCCAAGAGAATGCACTGGTCATAGCAAACACCCTCTTCCAACAGCATGAGAGAAGACCCTACACCTGGACGTCACCAGGTGGTCAACACCGAAACCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAGCAAAACCAAGACTGGGAGGTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTGAAGAAAGTAGGGAAAACCACTAGACCATTCAGGTATGACCTAAATCAAATCCATAACGATTATATGGTGGAAGTGAGAAATAGATTTAAGGGCCTAGATCTGATAGATAGAGTGCCTGATGAACTTTAGATGCAGGTCCGTGACATTGTACAGGAGACAGGGAGCAAGACCATCCCCAAGGAAAAGAAATGCAAAAAAGCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGCCAAAAGCAAAGGAGAAAAGGAAAGTTATACCCATTTGAATGCCGAGTTCCAAAGAATACCAAGGAGAGATAAGACAGCCTACCTCAGTGATCAGTGCAAAGAAATAGAGGAAAACAATAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTTCATGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATGGACCTAACAAAAGCAGAAGATACTAAGAAGAGG TCONS_00012487 . 3' 2874 TCONS_00012487 . 3' 4068 EMBV3_24247 TGGATTGCTTGGGATTATTGATGCAGGAGACCTGAAGGTAACTGAAGAAGAAACTGGCAG Gene GeneID:505979|STON1-GTF2A1L:NM_001080229:53_cdna Constitutive 2 NULL GeneID:505979 11 GENE STON1-GTF2A1L ALF MGC127834 STON1-GTF2A1L readthrough EMBV3_34700 GGCTCTCGCAGAGGATGTGTTAGACTCAGACTCGTGATGCTGATGAGCGAGAGAAGTGGA Variant GeneID:511255|OSBPL9:NM_001075505:43_cdna 182^260 2 EMBV3_20091 GeneID:511255 3 GENE OSBPL9 MGC140169 oxysterol binding protein-like 9 EMBV3_07747 TCATTCGGTCAGTTCACAACATTTTGGTCCTTCTACTCAGAAGATGTGGGAATGCCGCTG Gene BVT0102_100594 + 1 EMBV3_10319 GK000002.2:108286885-108891116 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103385 TCONS_00103386 1 XLOC_062097 NonCoding TCONS_00103386 XLOC_062097 NonCoding NonCoding - 2:108559514-108560786 - TSS76777 1062 1 TCONS_00103386_1 34 0.163841807909605 2 0.166011014948859 0.000716962078610805 0.00118237654881848 7.80979731099757e-05 0.00161833225780006 0.000790148697963878 1.67147487554178e-05 0.00084545218401433 0.000228129753227769 2.20245863934849e-05 1.92331403065022e-05 4.24553409400646e-06 0 0 0 3.21953411115053e-05 0 0 0 0.000134802053562069 1.44327838859664e-06 6.28802781177784e-05 6.70783052135291e-06 0 7.48064460593571e-10 0.00105012461635484 0.000430960337581474 0.000435649304876279 0 1.315955042665e-08 0 XR_234539.1 LOC101905798 PREDICTED: Bos taurus uncharacterized LOC101905798 (LOC101905798), 4e-06 57.2 76.19 0.0743879472693032 0 noncoding 0 0 1 1 0.00385262437487604 0.97902261441415 0.00519444478049556 0.925643921957931 CCAGAGCCAGGGTTCCCCCATAGAGTGGGGCAGGAGTGCTTGGGCCGGATTCTTAACTTCTCTGAACTTCAGACTGGAGAAGAGGAAATGAAATGATGCAAGTTTTCCTGTTCTGAATCCTCTGGGGCTCTCTGCATCTCGTCAGCTCTGAACATTTTCTGGACCTTGCTTCCTACTTAGCTCAGACTCTGGTGATAACAGAAAGTCAGAAATCCAGTCGACAAAAATTGGGCCGTGAAGACTGTACACGTACGTTTTTACAAAAGGATATAAGGAGACTTAAAACTTTCATTCGGTCAGTTCACAACATTTTGGTCCTTCTACTCAGAAGATGTGGGAATGCCGCTGATTCCTTAACTTCCTGTGTCTCAATTTATTCATCAGTGAAAGGAGGGTAACCACTGGACTTGTTTGATGGGATTGTTGGGAGGATTGAAAAATATAGGTGAAGTGTTCATGCAGACTTGGCACACAGTAAACACTGTCATCTCTTAACTCTTCATGTGATTATTATTTCAGGGTCCCCACGCATGCTGGAATGTATACAGAAGTAGTGTGTACAAAAGTTGAATTATAATATTCTACACATGAAACGTATATAATGTCAGAAACCAATGTTACCTTAATTGAAAAAAAGAAAATTCTGCAGAGCAGTAGTTGTGTAGTCCCTACACAGTTATAGCCTGTAAGTTGCTTAACAGATGAGCTGGGGGATCAGGATGAATCCTCTGGAGAGAGCTGCTCCCTAAAACGCTGGGAGAAAAAGTCTGAATGCAGACCTGACCCACGCTGTTCAACTCTTCTTTTGAGCCCTTAGCTTTTTGCTTGGCACACTCTCCACAATGGCAGTTCTAGGCTTTATTACTTGTATCTTGAAGTCATTTTTGAGGCCGTCTTCTTTGAGTACACAGAGTCTTATCAGCACCCCGATTCTTCCTCTGCTATAGTTCTCAGGCCCAGCTCTCCCTCCCTGTTTCTACTGACTCCAGCTTGCCTTCCTCTCCCCCACCCCCTGGTCTGCTGCAAAGCTGGAGGCCAGCAGCTTTCAACCCTGACCACACC TCONS_00103383 s 3' 272631 TCONS_00103383 s 3' 272631 EMBV3_08012 TTTCATCCCAAAACAATGAATTTCACCTTTTTCTCAAGAGCACACGGAACCTTCTCCAGG Gene BVT0102_018780 + 0 NULL GK000001.2:156551200-157169738 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00098838 TCONS_00019963 TCONS_00019989 TCONS_00022064 TCONS_00166080 TCONS_00224115 TCONS_00199634 TCONS_00250553 TCONS_00135549 TCONS_00136829 TCONS_00165811 TCONS_00231277 TCONS_00249014 TCONS_00031938 TCONS_00198626 TCONS_00064816 TCONS_00020176 TCONS_00198800 TCONS_00177994 TCONS_00251889 TCONS_00148277 TCONS_00023334 TCONS_00117178 TCONS_00048822 TCONS_00152648 TCONS_00198662 TCONS_00250261 TCONS_00055859 TCONS_00141422 TCONS_00056147 TCONS_00207067 TCONS_00055355 TCONS_00249913 TCONS_00107792 TCONS_00197973 TCONS_00032586 38 XLOC_131641 XLOC_142855 XLOC_059082 XLOC_010641 XLOC_010667 XLOC_012735 XLOC_100918 XLOC_137411 XLOC_121287 XLOC_153496 XLOC_081772 XLOC_083040 XLOC_100651 XLOC_140766 XLOC_151957 XLOC_018183 XLOC_120280 XLOC_039540 XLOC_010854 XLOC_120453 XLOC_107767 XLOC_154830 XLOC_090159 XLOC_014001 XLOC_071344 XLOC_028953 XLOC_092413 XLOC_120316 XLOC_153204 XLOC_033667 XLOC_085850 XLOC_033950 XLOC_125586 XLOC_033163 XLOC_152856 XLOC_063702 XLOC_119632 XLOC_018826 Coding TCONS_00218178 XLOC_131641 NonCoding NonCoding - 7:99213677-99241810 - TSS162275 5729 2 TCONS_00218178_2 157 0.905568161982894 3 0.796459547845869 0.000886771403701653 0.00102376193620026 0.000637427881539969 0.00060712227498956 0.000861658363640783 0.000240511398755287 0.0006507876490391 0.000334216051602831 0.000730185142003349 0.000214057065001311 4.3941352307135e-05 8.08315428101829e-05 0.000233250163478171 0.000763452724724909 0.000798732785629046 7.35735537230835e-05 3.13399592248213e-05 3.72164237701071e-05 0.000220143769383598 0.000283865233785678 0.000112882883633591 4.31142807595197e-05 6.58079553498174e-05 3.90706298563263e-05 0.000459456809083102 0.000383679264587045 0.000370165826075435 3.40174828754841e-05 6.31436507816371e-05 7.1976296098839e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 3e-131 475 97.51 0.0488741490661546 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-83 315 68.10 0.168964915342992 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 -0.0148602594801673 0.803029043356466 CTGCTCTAATTTTTAAGATTTCTTTCCTTCTACTAACCCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTATAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTAAGGTATGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGCCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGGTTTTTTCCTGTAATTGAGATCTAATCTTACTGCATTGTGGTCAGAAAAGATGCTTGGAATGATTTCTATTTTTTTTTAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGATGAAATGTCCTATAGATAGCAATTAGGTCTAACTGGTCTATTGTATCGTTTAAAGTTTGTGTTTCCTTGTTAATTTTCTGTTTAATTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGTGGCACTCCCGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGATCATCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAACACATGCAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCGTTGCCATTTACTTTATTGTTTTGGGTTTGAATTTATACACCCTTTTTGTGTTTCCTGTCCAGAGAATATCCTTTAGTATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGAAAAGCTTTTGATTTCTCCTTCATACTTGAATGAGATCCTTGCTGAGTACAATAATCTGGGCTGTAGGTTATTTTCTTTCACCATTTTAAGTATGTCTTGCCATTCCCTCCTGGCTTGAAAGGTTTTTATCGAAAGATCAGCTGTTATCCTTATGCGAATTCCCTTGTGTGTTATTTGTTGTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTTGTGTTTGATCTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCTCCTTGGGTTTATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCAACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACCCCTATGATTCGAATGTTGGAGCATTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTTTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCCTTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTCATTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTGATTTCAAGATTTTGGATCAATTTCACTATCATTATTCAGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGAGCATTTATCCTGTTCCTTTATCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTAAATTTCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCGCTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGGACGCTTGTGTTGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTAGAGTGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATTAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTCCAGTTATTGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATCGATAAAACATCTACGTTAAAGATGAAAAGTTTCTCTACCGTGAGGGTCACCCAGAGAGGTTCACCGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAATCACTTCCTCATGTGCACTCCACAACTGGACCTCTCAGAGATGTTCACGGAGTTATACAGAGAAGAGAAGAAGGAGGAAGGAGACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAACTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGAGTCCAAAGGGAGAGAGAGCAGTTAAGCCAGTAATCTCATTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTTTGGAATTTCAAAAATATGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAAAATGAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAATATAGGTACAAAATTGATAACTAATACCAAAAAGCAAAAGTTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTAAAAAAAAGAAGATGAAAAAGAAAGAGAGAAAAACAAAAAACAAAACCAATGTCACAAAAATTATAAAGAAAATACAGGTACAAAATTGATATCAAATACCTAAAAGCATAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGGGGAAAAAAAGTCACAGAAATTATAAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGCTAAAGAAAAGAAAAAAAAAAACAAGGTCAAAAAATTATAAAAATATATATATATATGAAGTTTGCTGAAGAAAAAAAAATAGGGTCTTTTTTTTGTGCAAAGTAATAGGTTATAAAAGTGAAAATTAAAGGAATAATAGAGGACTTAAATTTTTTTTTAATTAAAAAAGAAAGAAAGAAAAAATGATCATAAAAGTAGTAAAAATATATCGAGGACTTTCTCTGGTTTTGTTGTGAGTATTGTGGGTTCAGCTCATTTTTGGCTAATTCCTTGGTCCGATTTATATTTCTCGAGATCTATAGGCCCCTTCCTATGTAGTCGGTAGTAACCACAGGGTTTTAATCTATTGCCTGTAGCTTCCAAGGCAGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGGTTTCCACCCTGACACAAAGAGGATGGTGGAGGACACTTTTTTTTTTTTAGGCTCACTTGTTCAGTTGCGCAGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCACAGTGCCTCAGCCACACTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGTTCCGCCGGGAACCATCCATGGCCAGCCCTGGGCTGCCTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCCCTCGGGTAGTCCTCAGAGGCACAGACTCAGCTGGGCCTGCATTTTGTGCCCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTAAGCGAGCACGATTGCTGCGACTTATCACCTCCCCGCCACTTGGTTATCTAGGTGTACAACCGGCGCACCTTCTCAGGCAGATGTTAACCATCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGAGATTGCCCCCTTCCAGCTCTGGCTGCGTGTCACCCGAAGGGGAAGGTCTGCAGCCGGCTATCTCTGTTTAGTCCTTTGTTCTGTGCGTGGGCCTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGTGTGGTAGATATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCACTCAGATAGCGCTCAGGGTATTCAGGCCAGGTCCTTACTCTAAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCCGCTTGCTAACGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGCAATCTGCGAGTTTTAATTGTTTATTTATTTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTTGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGACTCCCTTCCCGGGACAGAACTCCATCCCTCCCTCTTTTGTCTCTTATTTTGTCTTTTATATTTTTTTCCTACCTCCTTTCGAAGACTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCTGGCATTCAGAAGTTGTTTTGTGGAATTTACTCAGCATTTAAATGCTTTTTTTGATGAATTTGTGGGGGAGAAAGTGTTCTCCCCATCCTACTCCTCCGCCATCTTGGCTTCTCCCCCTTTAACAGTTTTATTTCAAGCCAACACCTGAGGCAAATATAAGGGATAAGGGATGAGGTCTTAAAAGTTGATCATGTGCTGTAGTAGGTACATATGTTGCCTTCAGCCTACCTCCTTCTTTGGAAACAGCCTCTCCTGACCTTCTTTTTCTACATTATTGTTTCCAGCCTGTCTTCTTTCACAGTACTAATTGGACCAGGTGTGGATCACTGAGCCAAGAAATTCAATCAGTGTTCACCTGGAGAAACAGAACTGAAGGAAGCGGACCTGGACCTGGGGCACAGAGGTGTCAGCATGTTCAAACACAAGCAAGTCAAAGTTACTGTCAATAGGAGAACGATCTAATCTCTGTCCTGCCCATGCACTACCAACAATCCTAAACCTACTATATCTACCAGAACAAAGAGGAATCGGATACCAAGACGGTCTTAACGCTGGATCCACTGCTTTGATTTTAGCAACTTCGGGGAAGAACTTAACCCTGATTCCTCTCTCTAAAGAAAAAGAAAAAAAAGAAAATGAAGAAGAAAATCCTGACTT TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178422 TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178503 EMBV3_11451 ACCCCCACCCTGCTCGCTGCTTCTCCTGTAGGGTTTTGATGGTTCTGTTTACATCAGTCT Gene GeneID:540568|ATP2A2:XM_002694492:359_cdna UTR3_Alt 2 NULL GeneID:540568 17 GENE ATP2A2 NULL ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 EMBV3_28811 CTGGTATTTCTGCAGCTCTCTCTTTTATCCCAGAAGAGGAGGATCTCAGTCTCAGGAGGG Gene BVT0101_050470 + 1 EMBV3_30006 GK000006.2:97735629-97988423 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37790 TGAGAGGAAAATGCCGGGATCGTGACTCTATCTTTTGAGTGGGTAATTGGCACAATGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21260 GGAGAGAAGCCCTATGAGTGTAAGGTGTGTCGGAAAGCCTTCAAGTGGTACCCCAGCTTT Gene GeneID:530346|ZNF619:NM_001075931:137_cdna Constitutive 0 NULL GeneID:530346 22 GENE ZNF619 NULL zinc finger protein 619 EMBV3_37614 AGGCCATGCCTGTCACTGAATTGGACCTGGAACCACAAGACTATGACGTGGACATCAGCA Gene GeneID:528261|PLEKHA7:XM_002693095:465_cdna Constitutive 0 NULL GeneID:528261 15 GENE PLEKHA7 NULL pleckstrin homology domain containing, family A member 7 EMBV3_37362 CAGGATACTATGATCGAAGGTACTGGACCTTGTGGAAGTTGCCTTTGTTTGGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_07317 GTGCCAGTTTTGAGGAATAGTAGTAGGTGATGGGATCCCTGGTTGTAGTGCACCCATGGG Gene BVT0102_439250 - 1 EMBV3_23075 GK000018.2:58876661-58930233 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10457 AGTGGATGCATGAGACAGAAGAAAGTTTTTGGAGTTTATCTTTCTTCCCCCCTCAAACCC Gene BVT0102_127366 + 0 NULL GK000004.2:25333484-25570801 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14475 GGGCTCTGCTGCTGGTGGCTTTCTCTGTGGGTCGTGAGCTGCCTCAGCACCGCCGTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02891 CGTGGCTTCAAAGGTGATCGAGGCCCAAAAGGGGAGAAAGGAGAGAAAGGAGACAGAACA Gene GeneID:516087|SCARA5:NM_001102499:52_cdna UTR3_Alt 2 NULL GeneID:516087 8 GENE SCARA5 MGC139192 scavenger receptor class A, member 5 (putative) EMBV3_20776 TTACATCGCTGTCAGCAGCCTCTTGCAGATGTGGTGGTTGTGTGATCTGTGTCATAGTTC Gene BVV0101_044941 + 0 NULL GK000009.2:45531581-45543365 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237315 TCONS_00237316 TCONS_00237314 TCONS_00237317 1 XLOC_144682 Coding TCONS_00237314 XLOC_144682 Coding Coding LIN28B 9:45538878-45665612 = TSS177438 5283 1 TCONS_00237314_2 268 4 0.958345498015513 1.71147865060956e-06 3.87340648304155e-06 1.57649481433494e-05 0 1.39217378516229e-39 2.52212385299169e-06 3.00425925346594e-06 3.32660453998545e-05 0 0.000509884208705187 0.000242954651671831 0.000194719572870271 3.63470276935909e-07 1.3996880972972e-05 7.72439442519824e-07 3.69383009121645e-06 0.0018751767747705 0.000236099571873842 2.70418864139708e-25 0.00033553017384715 2.13948583486676e-06 0.000758773808897434 4.43878593067055e-11 1.189846838436e-08 0.000179869734006614 8.71068539229425e-08 2.43873092554215e-06 0.00011764214294756 6.10011574172812e-05 0.000223846619979154 XM_612469.7 LIN28B PREDICTED: Bos taurus lin-28 homolog B (C. elegans) (LIN28B), 0.0 9409 99.98 0.988264243800871 XM_005266975.1 LIN28B PREDICTED: Homo sapiens lin-28 homolog B (C. elegans) (LIN28B), 0.0 2830 85.00 0.486844595873557 TCONS_00237314_2 sp|Q6ZN17|LN28B_HUMAN LN28B_HUMAN Protein lin-28 homolog B; 4e-138 394 91.08 0.779850746268657 1 noncoding 0 0 0 0 0.101316497869384 0.509862596746043 0.045957198957303 0.359428640651585 ATGGCGGAGAAACCTGTGAAGTACAATTCCTTACCAACCCCCTCCAAAATGTTCCGAAACGGCGGGGCAGGCAAAGGTGGTGGAGAAGAGCCCGGGAAGCTGCCAGAGCAGGCAGAGGACGAATCCCAGGTTTTGCACGGAACTGGCCACTGCAAGTGGTTCAACGTGCGAATGGGATTTGGATTCATCTCCATGATAAGCCGAGAGGGAAGCCCCTTGGATATTCCAGTGGATGTATTTGTACACCAAAGCAAATTATTCATGGAAGGATTTAGAAGCCTAAAAGAAGGAGAACCAGTGGAGTTCACATTTAAAAAATCTTCCAAAGGCCTTGAATCAATACGGGTAACAGGACCTGGTGGGAGTCCCTGTTTAGGAAGCGAAAGAAGACCCAAAGGGAAGACACTACAAAAAAGAAAACCAAAGGGAGACAGATGCTACAACTGTGGTGGCCTTGATCATCATGCTAAGGAATGTAGTCTACCTCCTCAGCCAAAGAAGTGCCATTGCTGTCAGAGCATCACGCACATGGTGGCGAACTGCCCCCACAAAACTGCGGTGCAGCCGCCAGCCAGTTCTCAGGGAAGACAGGAAGCGGAGCCCCAGCCGTGCACGTCGACGTTCCCTCGGGAGGTGGGGGGAGGGCACAGCTGTACATCATTTCAGGAGGCGAGGTCCGAGCTCTCAGAGTGGCCCAGGCAGGTCCCCTCAAGAAGCTTCCTCCACCAAGTCGTCTGCAGCACCGGAAGAACAAAGCAAAAAGGGGCCTTCCGTTCAAAAAAGGAAAAAGACATAACCCTTCTTTAACGTATCATTTTCTCTCCCCGGTTGGGAAGTCTACCTCATGCAAATTCAGGGGAACAGTATTTCACATACAGCAGCTGACCTGGGATTTTTAACTACTGTTGAGGAACTGTGAATGTTTTTAAACAGACAAATCACTCTAAGCAAATTACCTTGGAGCAGGGTGTCATGTGTTATGTGACTCAGAGAATGAGATGCTGTTATCTGTATGTACACGTGTGAGAGGGAGCGAGCCTGAGTCTGTGTGTGTGTAGGAGAATTTTCTTTATAATGTAGACATATATATAAAGAGGGCTTGTCTTTATATATGTGTGTATGGAGATACAAGCACACACCCTCCCTCACAGAATTGGACATCCCGCAAGAATTGAAAGCCCACAGTGAAGCATTTTTAGATGGTTTTGAAAATAACCCTTGGAATTTTTCTTGAAATACCATTCCCTTTGTATTACATTAGAGAAAAAAAAGACTGTTACCTTTTATGTGAACCAAAGGATATACTTCAGATCTCAGAGCTGCCAGTCATATGGTACTAAAGGTTTTTAAAACATCAGTTCTCCCGAATTTGGGATTGCCTCTTTTTCTTGGTATCTGTACAGTGTATCCCCCCACCCCACCCCTTTTCAAGGCAGTACCTTAACTCCATATGCCTCCGACTGCCGTTTAAGCTTTTTTGAATCTGGGATACAAACCAGAAAAGACAATGAATGTGTAATCTCTGTGCCGATATTTCAGTGTTTCCAATTCCAATGTTTTGATTGTAAATTAGATGCCTATTCAGAGAAATGAAGGGGGAGGGCAATGTATAAATGTAGTGATGTGATTGTTTTCAGTGGTATTTTGATACCAGCTCATTGTAATCTCTTACATGTTGTGAGGTTTTTGAGGGACTGTGGCGACAGCAGCTCCCCTTGACTAAGTCAATCCTTCTAACCATCACTTCGAGCAGGGGCCTCCTTGTTTACTACTGAAGACCTTGGAGGAAAACTCCAGTCATTGGGTGTATGTTTTTGGTGGCTGTTTTTATTCCCCCTGGAGAGTTACCTAACTTGTTTCTAAAACAAACACACAAAACAGCACAGTAAAATGCCAGGGTTGAGAATGAATATTGAGTGGATGCTCACAATTGCCCATGATGTATGACCTTGAATAATACGAAAAAGCATCATGTTTGGTGGCAGGCGACTAGAGTGATGAGCCTGGGGAGAAAGGTTCCCAAACCTCTCCTACCAGAGAGCGAAGTGTTTTTTATACAATACAGTTGATCTTATGAGAATTCCCTCATGACTGCTACTGAAGGGAGGAATATGGGAGATTCGGGATGAGCATTCAGTGATGGAGACAGAGACAGTAGTGTCGATGGCTAGGGGCCAACCACAGTATTGATCCCTTCAGCTTCCAGTCATGAAAAACACTCATTTTGCTGTCATCCTGGTTCTAGATCTTATGGGTGAATTTTGGGAACATCTCCAAGAAGGTACCAAGTAGTAGTAAGGCTTAACATTGGCAGTAAATAGAGTCTTGTATAAGCCTGTTGGTGTAAGCTCAGATAATCAGAAACAGAAAATAGCATGATTCAAATGAGACATGTTCTGCTGAACAGTTTCTGCTCCCTCCCAGCTTGTCCTGCCGAGGGAGACTTGTACGGTTTTGCCCCCGTTTCAGCAAGCAAGCCACGCGGAAGGAGAGCAAGCGAGCCTGGGGCTGGGCCACCAGCCCTTCCCAACTCAGCTTGAGTTGACAGTGTTTGTGAGAGTCTCCATGGGATGTACTGAAATCTCAGTATGCTGTGATGCAAAGCTTACCTTTGACGATATTGAATGTGATAAATAGCTATAGAAAAGTACTTCCTTGCCTTATGTGAGGAGTGTAAGCTTATTTAAATTATGTAGACAAATCAAAGTGGCATTGCTTAATTTTTAGCAGGTATAATAAGCAGGTTAACAGTAAAAATGCAAAATGTAATAAGTCACTTTGAAAATTCAAACCAAAGTTCCTTGACCTTATTAGAAATAGGAAATTATGGACTTGAGAATTGGACATTCCCTGTTTACATATAAAAAGTTCAGAGCTGAGATCACGATTTAAAAAAAGAAACATTTTATAACTGTGGACCTTATGGGTGCAATTTGAAATCACTTTTCAGCATCTCACCAGACTGAACTAAGCACATACCAAACCTATCTTTCATGAAAAGTTGGGGTTTATTTTTTATATAAGAATATTATCACTATTACATAAACATACTCAGGACAAAGAACTTCGCTCAGGGAACATACCGTATAATAATTGTTGTTTCTTTACAGAATAGTCTACAGTCCTGCTTACTCAAAACAAACCAAATAACTTAGACCTTTATGTAAGTATTATGTACTGATGTTAGTAATAACTACCTCTGAGTTTGACATAGATCAAAATGTCCAAATATCAATTATCAGCTCTCCTTTTTTAATTTCATGTGAAAATTACTCAAGGAGACTTTCTCCACTCCTTTCAGATGTGAATATCACTGACATAAGCACAGTGTCCATTTACATGGGTGAAATATTCTGTTTACAGCAAAAGGCTACCTCATAGTTGATGCATAGCACACCTTTATGCTGCTCCAGCCTTACAGTGGCTGATAATTCTCTGGTACAGAATCTTTTTATCTAAAGTATAGATAGCAATTCATAACTGCATGTTTCTGACAAACACTTGTGAATAATGAAGCATCTAGTTAGCAAAGTCTCGGAGCATTTCCTTCAAGTGACCATGTGTTTAAAGACATAGACTCTTCTACTGAAGCAAAACAGAGCACACAAGTCAATCTTCGAAATAGCTGCTTTGCCCAGAGGTCGGTAGTGGGAAGAAGTCAGGAAGTGAGGTTGCTTGTATGAGTGTATGTGTGCTGGGCAAAAGTATCAAAGATGCCAATCTCCTTCGTTTGTGTCTGTGCTGCCCTGAGGCCAAGTGATTGCAGCATTGTTGTCCAGGCACATAATTAACAGCACTGGCTGCCAAGGAGTGAACGTACAGTGGACGTGCAATGCCCTTTCTAGCTACTGAGGGGTAGGATCTGTGTGAAGCATCAGTTTACTGGAGTTGCTAATGGGTTGGGCAGGAGGTCTGTGAAATAGTTCCCCTTTGACCTCTCCCCACCCACGTCAACACAAATGTAATTCCTAGGAAAAGATGCACGACCGGTCTCCTAGCCCTGTGAGCTATTCATTGCTACGTGGCAGATTATAGTAGAAACATTTTTATACTTGCATTTTTCGTCTTTATTAGAAGCCTTTGGATGTATTTTTACAGTTGAAAGATTTAGAAAGATTTTTACCTGCTTATAACTTGGAAATTTGGCGTGCAATGTATGGGAAAAGATCGAGAAACATCATGTTATTAGCATTGGTCCATCTACAAATAAATACAAAGGTGTTTCTATTGCCGATATATATTTTTTTTGGCCCAGTTTTATTTTGCACCAATGTGGCCCCAAGTTACTGCTAGTTGTATGTAGTTTGTGAATAGGAGCCCATAAGTGTTAATAGACTTTGTAACTTTCACTGTAAGATGAGTTATACAGGACATGGAAAATCTCATTAAGTCTTAAAGATAATTTAAATTAATTTATCTGTTTTCTCTAAGAAATGTTTATCATAAAATATATATGTGTATTTCCCCTTTGGTTATAAAATTTGGGAAAGTGTGTACACGTGCAGCTGCACGGACTTTAATTTTCTAGATGTCTTAATGAGATTTATTTGTTTTAGGGAAGAACAACTTGTTACAAGCATCAAATTCTGTCTTACATCGCTGTCAGCAGCCTCTTGCAGATGTGGTGGTTGTGTGATCTGTGTCATAGTTCAGTTAGAGTGAGAGGTTGACCTCTGAATCATTGTTAAATTGTCTGTTTGGAGCAAAGCTGCAAAGTTATGGTCAAGTACTGTACAGCGAGAAACTATTGCAACGTTGAATATATCTGTGGCTTCACATGTGTGAGAGTTAACCAGCTTGAAAATGATGGTGTTGACTACCTCTTGAATTACTTACAGCTACCAACCACTGGCACCCACCACCAGCTGGCTTTAATTAGTATGTATTGCTTTTTTGGTATTAACAACTTTAACCACAATAGAGACCAAAGTGAACACTGATTTCTATATGACTTTAATATGGTGTTTTATCTAGTGTTTTACAATTATCCTGTGTAGTCTTTAGATGACCTCATTGTCCATTTTGGCTCATGTTGTTTACAAGTGAAAATAAAAAACACTTGAACTGTATGTTTTTAAAGGACAAAAAAGGAATAGATGGTCGGAATGGCGTTTCACTTGTGTACAGTCATCTCAATGGACTACAAGTACTGTTTGCCTTTCTGCAGACCGTGGATTTTATATTATCATCTCATGGCTAGTGTCTTATTCTGTCAATTATGGATATTTTGAGGTTTAAAGAAATTACTTGATTAAAAATAAAACATATAACGTTGGCATTTAT EMBV3_13627 TCTGTGTATGCTGTTGGGGCTTTGTGCCAGTCATCACTTTGGAAATCTGTGTTCTGAGGC Gene BVT0102_216698 + 0 NULL GK000001.2:88664001-88784263 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001495 TCONS_00001498 TCONS_00001500 1 XLOC_000372 Coding TCONS_00001498 XLOC_000372 Coding Coding ZMAT3 1:88633994-88670836 j TSS769 8155 1 TCONS_00001498_3 289 0.0301655426118945 7 0.77883336500095 5.01418885041476e-09 3.22516580720835e-06 0.000241681973468703 6.31026995905884e-05 1.18286275856321e-06 1.15497110978867e-06 0.000303020198769587 8.47007885381125e-05 0.000404473408953696 3.11596432385871e-11 3.45603568390841e-21 2.56748756897055e-11 1.60589160337612e-05 3.61875398862809e-06 2.34009519822096e-10 0.00225096349488269 0.00313562506158448 0.00201920843804741 0.00019395492890029 5.09667531035505e-05 3.26083326255223e-322 0.00122185125600207 0.000304137429459892 0.00106222729944 0.000162322660467992 7.81390255066303e-15 6.07286751950113e-06 5.08769999848727e-11 2.76503609619128e-12 4.23631558810042e-05 XM_005201660.1 ZMAT3 PREDICTED: Bos taurus zinc finger, matrin-type 3 (ZMAT3), 0.0 3768 100.00 0.256039239730227 NM_022470.3 ZMAT3 Homo sapiens zinc finger, matrin-type 3 (ZMAT3), transcript variant 0.0 2094 76.85 0.350827713059473 TCONS_00001498_3 sp|Q0IIC4|ZMAT3_BOVIN ZMAT3_BOVIN Zinc finger matrin-type protein 3; 0.0 595 100.00 0.996539792387543 4 coding 1 1 1 1 0.00843971497661289 0.978841833341122 -0.0195157314543017 0.79686692871188 CTTTATATTGTGTATTTCCTTTATCAAGATGTTTTAACATCCTCCTCCATCATTTATCTCTGAGCTGGCAGCTTGTCATTGGCACTTTGGTATCCTTTTGTTTCTGTACAGATTTGAAGACCTGACTTCTCCTCATCCTTTGGATGATGCCCAAGGCTTTTCTACCCAATGATCCTCTTGCAACACGCCGGGCTTCCTCCGCCTAAGCGGCCCTCATCCTCTCCTCCTATGTCAGTGGCCGCCAGGTCTACAGGAGCCTTGCAGCTTCCACCGCAGAAGCCTTTTGGGCAGGAGGCTTCCTTGCCTTTGGCTGGAGAAGAAGAGCCACCTAAGGGAGGGGAACAAGACACTGCCCTGGAGGAGCTATGTAAGCCCCTGTACTGCAAGCTCTGCAATGTCACCTTGAACTCAGCGCAGCAAGCCCAGGCTCATTATCAGGGTAAAAATCATGGTAAGAAACTTCGAAATTACTATGCAGCCAATAGCTGTCCTCCTCCTGCCAGAATGAGCAATGCAGTGGAAGCTGTGGCTGCTCCAGCTGTTTCAGTCCCTCCGCAGATGGGCTCCTTTAAGCCAGGAGGCAGAGTGATCCTGGCCACAGAAAACGATTACTGTAAGCTCTGTGATGCCTCCTTCAGTTCTCCGGCTGTGGCCCAGGCTCACTATCAAGGCAAGAATCATGCCAAGAGGCTGCGGCTGGCGGAAGCTCAGAGTAACTCATTCTCAGACTCCTCAGAGGTCGGTCAACGGCGGACCCGAAAAGAAGGGAATGAATATAAGATGATGCCTAATAGGAGAAATATGTATGCAGTACAGAATAATTCAGCAGGTCCTTACTTCAATCCCCGCTCTCGGCAGAGAATTCCACGTGATCTGGCCATGTGTGTTACTCCAAGCGGCCAGTTTTACTGCTCCATGTGTAATGTCGGGGCTGGCGAAGAGGTGGAATTCCGGCAGCATTTAGAGAGCAAGCAACATAAAAGCAAGGTGTCTGAACAGCGGTACAGGAATGAGATGGAGAATCTGGGCTACGTATAGGGATTGTCATATTCAGATGGAGCAGCTTGTCCTGCCTGTTGCTCGCCTTATGTCAACATGCCCTGCTTTGTGGTTCTTTTGATATGAGTACATTCCTCTGCTTAATGTTTATACATATAACCTGCAGTGGTACCATAAGGTGTCAGAATTGGGGAAGGAAGAGAATGTGCTTAAGTCATGATGCTTTTTCAGGTCAGTTGTGTTGAGCTGCTTTAAGCCTGTGACCTACCTACCCCATGAGACATACCTTTTTATCTTGACCAAGTTCTGGTCAACTAGTAGCCTGACCACATAGAGCTTTAACTATTTAAAAACTTCATATTCTTTTACAGTGTTAGTGTTATGTATTGTTAAATAATTTTATCGAGTTTTTGCTTCAGATCACAGTAAAAGCAGGTAAGCAAAGATTTTAGTTTCCTAAGGTTTCTTTGGAACTACCATCTCAACTCAATGAATTGTCAGTAGGATATACTATGGAAACTGCATTAGAATCTTGCCCAGAACAGTGTTTTCTGTTTATCATGTCCCTTCCTTATTGAAATGCAGGTTCTCGTGGATTCAGACACTTCTAATGTGTTTGTGTACTTCCAGATAGCGAAACTTGATTTTCAGTTGTGAATTTCGCACATTTAAATTCACCTTCTTTTCTCCTCTTTTTTTCTCCCCCAGTTGAATTAGCTTATCCAATTAGCTCATTTTCATGTCCCAGAACGGTGTTGTAGGTTTTCCAAGCCCCATATTTGAATATCCAATAAGTTTAGGATAGATGTGATTTTTTTAAATATATTTTTTTCAGCTGGTGTTGGGAAATGAAATGTATTTGATTTTTCAACTTAGAGTTACTTCATGATGATAACATGCACTTATGTGATGGTCTCAACCGTAAGTTCAGAACCCTTGATATTTGTTTTGATAGACTTTTTAGATAGACAGATCCTTAAATTATACTCACATTCTTCATTGTCTTGCTAATTTGTAGACTGTCCTGAAAAATATCACTACTTTACTATTTCCAAGAAAGAAAAGAATTTTTTTAAAACAGTTAATCAAATTTTAGTAGCATTTCCAATAGAAAAATACCTGAACTTTGGCATTATTCTTTATAATTCAGCTTCTTTGAAGATATAGATTAATAAAAATATAGATTACTTTCATATCTGATAATTAGAACAGTATTATTATTTTTGCTTTTTGTTTTTAAAATGAGAAGCTCTAGTATTTTGTCTAGATTAACCAATGGAGGATTCTATGAACTTTCACTAACTGTATTTTACTTATTTACTGTATTTACATGGATAAGATGGGTGCTCATCCATACTCCTTTTGAAAGGCCATGTTCATAGAAGTTTATATTGAGCAATATCTTTGCACTATGGTAAAGTCACTTTTGATTGCTTATATTACTAATTAAAAATAAAACTCCTATTTTTCCTTAAAAATTCTATCGGCAAAAAGATAAGGAGAAGGAAAATTATAATCATCATTCCATTCCTTTAGTACTGCTGAACAATTTTTGAATTATCTAGACCCATATTTAAAATTAAGTTTTGTGATACTGGTACACTGGTACACTCTCTGGTACACTCTCAAGTTACCCTTCTGTTGAAGTCATGGTTTTTTAATTCTAAAAGTAGAATTACTTAGAAGTTTTATTTTCTCCCAGGAGCAGAAGAATGAAATAATGTTCTGTTGAAGTTCTATCGAGACCTGTGAATCAGTATAATAACACTTTTTGCAGTAAGCTATGAAGTATAATTGATTATTTTAGAGCAATTTAGAGCTTCTCTTATTGATTAGTAGGTTACTCATTTTGCTGCTAAGTGTAATTTTTTGGTAGATTTTAATATGACAGTGCTGGCCACATGGTTCTATGATTATTTAAAAATTCTTTTTTCCCCTCTCTGTGTGTGACTACATATATGTATACACATGTATATGTATGTGTGTGTATATATGTATGTAGTTGTATAAGTACACACACATATATAAATCTATGTATGTATAGTTTTATGTGATTCCATAGAGAAGATTTCATTGAATCCTTAGATAACAGTAAAAGATTGTGGATAAGAATTTACATTTTATACAAGTGGCATTCATCCACTTTCAGTTTTTTCTTTGCAGATAAAATTAATGGAATGATCTTCTCTACTGTCCCCACTTAACAATTTCGTTTTATATATGTAATAGCAGTGGACTTAAGGCCTTGGTGTTTTTCCTGGCCTTGCATATTCAGGTTTCTAGTCTCTCAGTGCTCTTAATGGATGTTATGAATGCATAAACGCATTTTCTTTTAAAGAAAAAAGTTAGATTTATAGTGTTATTTCTTACTTGTTCTATTTCTTTGCACTAAACAAGACTGATGTTTGCTTTATATGACACCTTAGAAACCATATTGCCTACAATAGCTGGGTTTGCTCCTTACTTTCCAAACTCTAGCAGTCGATAAATAACTTTCATGTTTATAAAGGTTACATACACATCCAAAAAAAGAATCACAAATCTCTATGACAGTGGGTTGTGTTTTGGGCTTGTTACCTTGCAACATTCTCCTTGTTCCATAGGTGAAACAGATGGTGACAGAGGTGTCAGAAAGGAAATGCATAGGTAAATACACCTCTGCATGCTACAGTTTCTCATGCTCATGCATTCCTTATGGACAGTGTTGTTTTTTTCCTGTCAAAGAAGGCTGTTAGTACTGCACTCAGTGGTATGTGATCTCTGTCAGTTTCGTTTAGTAAAATCAGGTCCTGCTCTGTAATATCCTTTAGAATTTGCACCCTGTGCTCCCCAGGAATCACATTAATATCTTTTTACGTACTGTATACAAGGATGGACAGAGGCCTAACCGATGGAAAACCTTTAGTCAAATAAGTAGATTCTAGTTCTAGATCTACAAGAAGAACGCAGAGCATCAAAGTCTCTTCTCTGTGAATATCTTCATGTACTTTGTCATTCAGAAATCAATGTTGAAGATAACAATTAGAAACTCTTCTAAAATATCGAGGGCAAGAAGATGTAAAGGAAAAATTTTGGTGTTCCGATTAAAAGATTAGATTGCTTATGTCTTCTAAGTGTTTTTTCAAAAATACTCAGTTACAGAGCTGAGTGTGCCATGTGATCCTTCCAACTCCACATTGAACAGAAAATGTTTTGTTGGTTTTGTCTTTGTATGTCCTGTATTATAACTTGTAAATATGTGCATGTTGTTTATGACGTGTGTCTGTTTGTCTCTTATTGCACTGAAATCTGCAAGGTGAATAACTGTCCTATACCATTTGCAAAAACTTCCTCCAACTCTTCCTCACTGTTGCCCCTTCTCCTTAGTTGATAAACTTAGAAAACCATTTAGAATTTTTTGAAACCCTGAGATTGAATGAAAAATCAATCATGGCTGTCTGAGATCATCTCCATGTCCCTCTAACTTAAACAGCTGAAAGGAAAGCATGAGATCTTCCACCTTATTTTATAGAGCTGTTCTACAATACTGGTGTGCTTGCTTGTATCTATACTTTGAACTAGGATTAAAGATACATATATATACACATGTATGTGTATATACATATATATTGTGTATCTGATTAAATCTTCATATGTAGATAGACTCGAAGGATTAATGGTGGTTTTAATGATTCCCTCACTCCTGAATCAGCTGGGACTATGAACAACGACAGTTGGAGGACTGTTCAGTGACCCATTTAAAACGAGTCTCGCTTGTGTCAGGGGAGACATGTAACTGTTCTGCATAATGCCCTCTACAGAGAGGCCTAAGAGTGATGGATTTGGAACCTAATCTGTTTTGTTTCCTCAGTGTCAGAACACAGGCTGGAAGGACCTTTTAAAAACTTGGTGGGGCATATACGAAAGACAACAGAACTACTTTAGAAGTAGAGAAATGTTTTGTCAGTATAGGTAAAAGTTTAATGCAGGCTTTTGAACAGATACTTTAAAAAGATTCCATCTTGCTGGCTTTTCTTTTTTCAACCAGCCAAATCACCATTTAGATGTTTCATGCGTTGTAAAGGATGTCTTGTTGCTTTAATTTTTTTGGTGGTGGACCCCTGTCATTGTGAGCTATCACTGTCAGTCTTACTAAATAGACAAATAGCTGTGTAAATAGCTTCTCATACGACATTTCTACTCATAGCTGTTTGACTTTGTCTTGCCGCTATGAATGGGAGGATCATTTATCAACTCCCCTTCTGGGTAGCTACCAAAAAAATACTGGCTTATGGTCCCATGTGACCCTGTCTTTGTTAAGCCCAGATTATGAGTGCCTTTAGCAAGTTTTAGCATTTCACAGAAAGAAGAGATGATAGAATTATTGCCATTAGTCACAATGCATAAAATAGGAGCTTGGAATAACAAAGCTTTGTGTGAATTCTATGTTTTACATCTTTTTTTTTTATTCATGCAATCTCAATTTGATATTGAGTAAAACTATGTGATAATTAATCAGGAACCATACATCCTAAAAATGAATCCAGTTGTCCAAGGCTGGCAACGGTCATTGATTTTTTTTTTCCACTTTGATCTGCATTGTATTTATATGTAGTGATCGATAGTGTGATGGATTGGGAAGAGCTTGATATTGATGTTTGGAAAAACTTTATTTCAGTGTCATTTTCAAATACTGTCTTATCTAATACTGTAGAGAGGATAGAATTATGTATTTGCACATGAACTGAAGACTGTCATGCATAATACTTATTCATTGTGCTGTTATGGTTCATCTCTACATTTAAAACAGGTATCTTCACAAATCAGGTTCAAGATGTTTTAAAGTAAAATTTTCCTTACTTCAATGAATTTAAAATTCTAAATTGCCTGTACTCTTTGAGTCTCTAAAATGCACTGCTAAATTAATTTTACTGCAGAAATACTAACATTTTTCTTGACAGTTTATTATGAGAAATTTTAAATGTACCTTAAACTTAATGAATTTTACAGTATATTAGCACTAGATTCTACTATTAACATTTTCCAGTACTTATATTACCATATATTTGTCTGTCCCTCTGTTTATCCGTTGAACAATGGAGTTTTAAAAATATATACATTTTAGTGTAAATTTCAGATACTTGCCTAAACAATTCAGCATAGGCATAATTAGTTATAGTTTAATATCTGTTTACATATTAACATCTTTTAACAAGCAGTGTATGAAGTTGATAACCTGAGCCAGTTAACATACGTCTTTTTCTCCTGTGGACTTTAGCCTTCTTGTTTCTGTTTTTGTATATGCTTAGAGTGAGGGAAGACAACTCCTTTTCAAACTGAAGTTTTTTGGTGTTGGTCATTTTAATGCTTAATTGTCATACATTTTAAAGCTTCGTGTTAAGAATTTTTTCTTTATCCCTCTTTTTTGATGTATGTTTGCTCAACTATGCAGCTTCTTTAGAAAACTGTAAATTACTGGTTGGGGTTTATTAAATCAGCTTATACCTCATTTCAATCTGCGGCTGCGTTTTTCTCCTGGTATCATTTCTCGCTTTACTACTTTCACCTGTTCTACCAGAGAATAGAGCGGCATAAAGGGTCAGCCCCACAGACGATTAGCTGTTTAAAACAACTCTAGAAGAACAGATGGAGTAGTTTAGAAAGTTGAAACCATTCGTTTATCTAAAGCCTTTGAATTCCCTGAGAATTGTAACTGCCCATGCTTTCTCTTAGCCATAATTAGCAGGATTAAAAATGATTGTACTGTACAATGAGTTGTTGAAATTGTAAGCCTTAGTAACCATCTTTAGCTTTACTCTAGTACTGTTTAGGAAAAAATTATTGACATATGCCTTTATTTTTATGCCAATTATTTTGTGGACAAAATCAGAAGAATTTAAGTGACTTGTTGCAGATTATGAAGCTTCAGTGGGTAAGTCAGAACTGAAATTTTGATATCCTGGATTCATATTCTTGTGCTCTTTGATAAAATTCATGGCTTTCAAAATAAACACTCCCTTTAGGGCGCTTAAAATGAAACTATGTATTTTTACTAATTAGACTTTCATTTTTTTGGACATTTTACAATTCTTTGAACTTAAAAGATTTTTCCATGGTCATAGTTTCTCATTAAGTCAATGCAACTGCTAAAAATCTCACTTTGCTGTTAAATACTAATAATACAGGTTTTATCAGATTTCCTTTCACATTTACATAACCTTCATGATTCACTCATAACTCTTTCTGTGTAAGTGCTTAAGTGACCCCCTCACTAGTGAAAATAAATGTTCTATATCACTGATTATATGTATATTCTCTATATGATATATTTTTTTAAGGAAAAGAAACCCCATGTGTCCGGATGAACAATATTATCCTAGTGCAAAGCACATATAAAGTGGCTTGTTCTATTCTGAAAATCTGGCATTTACAGGAACAAAACTTTTAGAGTGGCTGGTCATTGTTTTACCTTCTTTTGGTACTTGAGCATCTTTCTGTGGTTTTGTAAATGTGTGTCATTTTGTAAGAATTTCTTGTTGATTCTGTGTTAATTGACAATAAGTTGCCTCTCTCTGATGTATGCTCTAGATCCAGAAGCAAAACTAATTTTGCTTTCACTGTTAATGTTGCATTTTAGCTCATTGTTTTAAATTAGAGAATAAAATCGTGGAGCCGAGGGAAACTTTATAACCCTTCATTTAATGGCATGGCAAACTTTTAAAATTGCTTTTACTGTTTCCCTAGAATGACGTTTCTGATAAAGGACATAGCTGAAAAATGCCTGCCAGAACTGTATGAAATTGGGTTTGTTTCCTACAATTTCCCCTAAATGTCATACAGGGATTTAACATCTGTGTATGCTGTTGGGGCTTTGTGCCAGTCATCACTTTGGAAATCTGTGTTCTGAGGCTACATAAATGACAAAAATGTCTTGGGATTGAAGCCAATCAACTGTGAACTGTGAAATTGAAATTGCTCTTTTGGTTTTATTTTCTTAAGCATATTGCATAGAGAATCCTGAAAGTTATTTAAAATTTACACTGCTTCTGTTGATGGCTCATTTTGGCTGTGTATCCTCATTTATGTACTGATTTCTGATAAAGGCTTGACGTTATTATAGCAGTCATTTTGTGTTCAACTTAATAAAAGAGTTTCTGAGTCTTGTCTGCAAATCATT EMBV3_35064 ATGGGGATCATGTGCGTGCTCTCGGTCTGCTGGTCGCCGTTGCTGATAATGATGTTGAAA Gene GeneID:282330|PTGER3:NM_181032:10_cdna Constitutive 0 NULL GeneID:282330 3 GENE PTGER3 NULL prostaglandin E receptor 3 (subtype EP3) EMBV3_17718 TCCAGCCTCTGGCTGCTGGAGCCCGCCTCCTACTGCGTGGTCCCCATCCGCAGTGTTCCT Gene GeneID:100299473|LOC100299473:XM_002694240:192_cdna Constitutive 0 NULL GeneID:100299473 16 GENE LOC100299473 NULL hypothetical protein LOC100299473 EMBV3_26219 TGACACCTGTCCCTTTTGTCCAACTCTTAAATGACGGACCTGACTGGGAGGATGAAGAGG Gene GeneID:616238|RNF214:XM_002693000:181_cdna Constitutive 1 NULL GeneID:616238 15 GENE RNF214 NULL ring finger protein 214 EMBV3_39273 TGAGCTGGATACCAAAGCTGCGATCTGAAGGATGAGAAGAACTTACCCAATGTTGAGGGG Gene BVT0101_002731 + 0 NULL GK000004.2:58724924-59919907 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184147 TCONS_00184146 1 XLOC_111284 NonCoding TCONS_00184147 XLOC_111284 NonCoding NonCoding - 4:59793036-59816661 - TSS137194 1180 2 TCONS_00184147_2 38 0.288135593220339 2 0.950135455469015 0.000178718745798238 0 0 0 3.76564309993254e-05 0 4.94212485691771e-05 0 0.00018053727141975 5.23028708536073e-06 0.000197878846299468 3.03024260698206e-06 3.03949454573784e-05 9.96611485208211e-06 0 0 0 0 2.43076302844275e-05 0.00152299608243039 7.71795201567186e-06 0 0 0 0 7.16488587627037e-05 0 3.66298889274764e-05 1.02852093919154e-05 5.09512493328799e-06 XR_234302.1 LOC101903931 PREDICTED: Bos taurus uncharacterized LOC101903931 (LOC101903931), 0.0 962 100.00 0.450847457627119 XM_005258676.1 ZC3H4 PREDICTED: Homo sapiens zinc finger CCCH-type containing 4 (ZC3H4), 2e-22 111 82.57 0.0915254237288136 0 noncoding 1 0 1 1 -0.142312534444447 0.421029626432863 0.0290093518805232 0.696613913196307 CAGCCTAAGAACCCCATGGGACTATGAATTCACCCCAAATTTTAATTTGCCATCCAGCCAAGGTCTTAAAGAAAAACTGCTCCCTAATGAAGATTGTAATGAAAATGTAGAGGAGGCTGCAGGTGAAAAGATTATGAGGCCAGGAACATGCATCACATGTTGAAGGAACAGCAAGCAGGCAGCATGGCTGGAGCAGAGAGAAGCACTGACAGCAGTTGAGGATGGAGGGAGCCAGAGGTCACCACAAAGCTTTGCAGACCATGGTGAAGAGGATTTTGTTCTAAATGTGATCAGAAGCGACTGTAGAATTTGAACAAAGAGTGGGGTGTTCTGGTTTATGTTTTCAAAAGATCACATGATTTTGTTTCTTTTGTTAGTGTTTATGAGCTTGATGATGACTTCAGCATGTTTCATCTGATAAGGATATTTGAGCTGGATACCAAAGCTGCGATCTGAAGGATGAGAAGAACTTACCCAATGTTGAGGGGAAATTATTGTGTGGTATATAAAGACACTAATGAGAGCTGAAATCTGAAGATGAGTGAAGCATGTTCTTTTCATAGGTCTGGGAAACATTCATTCGGTCTGAAGTCCAGAGTACAAAGGCAGAACTATGAAAGAGGAGGCTGAAAATGTTTAGTGAAGGAGTTTGGATTCTGTTCTAAAGGCAGTGGAATGTTTTGAAGACTTTTAAGTAGGGGAATACAGGGCAGTTCTATACTTTGAATGGTTTGCTTAGGCTGTTGGAGAGGCACTGGAGATGGGAGATCAGGTAGGAAGAAGCTGCAAAAGTAACTCAGGTGGAGGGGTGGACTATAATCATACTTTATGTGAACATTTCTTGGAGCTATTAATATTCTCTTAATTTTGGAGTGCTGTGCTTGTTGAATAGGTCTTGCCCATACAGAGTCAAACTACCATCTTGGAACTTCCATACAGGACAAATTTAATTCTGTTTTTATATGGAAGTCCTTCCTATTTTTAAGGCAGCCATTCATGTCTTTTTTCCCTTTATTTCCATCCATCATGTGGGAATTTTTTTCTTGTGGTTGAATGTCCCAAATTTCTTTAGTTCATGAGAATTGAGTATTCCCCACATGACACAACTCTTTTTTCCTTCTCAATATTTTGTTCATTTTTATCTTGATCAATTCTTGTTGACTAGCGACCCTCTCAGACT TCONS_00184149 TCONS_00184150 s 3' 169624 TCONS_00184149 TCONS_00184150 s 3' 147073 EMBV3_16990 CCACACAGTCTTGATTCCTGTCACTGTATTAGAAATCTTGAGATCATGTGGGGCGATTCC Gene BVT0101_009725 + 0 NULL GK000018.2:60219350-60232980 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084545 TCONS_00087350 TCONS_00087349 2 XLOC_051611 XLOC_052451 Coding TCONS_00087349 XLOC_052451 Coding Coding LOC788599 18:60224992-60243950 j TSS64874 9770 1 TCONS_00087349_5 534 0.365711361310133 4 0.484834098222293 0.00101819901385423 0.00123187111837585 0.00103835884506414 0.000954122819569015 0.000703804266186456 0.00048306044392736 0.00123482883452539 0.00117386623322755 0.00209516670909654 6.02711605742575e-05 3.66118388558277e-05 6.38224585764125e-05 0.000275323684173788 0.000324978284616702 0.000630318432382059 0.000452490343172731 0.000900578050995358 1.13897129871744e-07 0.000875593631372877 0.00147035354640413 0.000295997071146261 0.000349740830190061 0.00076187258905113 0.000319163104922913 2.47690848889987e-05 0.00134754907480591 0.000753277892023071 0.000126047720625689 6.7547904773201e-05 0.000286872125579257 XM_005219614.1 LOC788599 PREDICTED: Bos taurus zinc finger protein 677-like (LOC788599), 0.0 3018 100.00 0.171136131013306 NM_024733.3 ZNF665 Homo sapiens zinc finger protein 665 (ZNF665), mRNA. 0.0 738 69.09 0.194984646878199 TCONS_00087349_5 sp|Q08AN1|ZN616_HUMAN ZN616_HUMAN Zinc finger protein 616; 0.0 553 51.13 0.964419475655431 8 coding 0 0 0 0 -0.033230072643617 0.769007633666092 0.0106335856723746 0.859095480342404 TCACCTTTCAAGATTGACTTCCAAAGACTCAGACTGAGGAAGAAGCCTGGAAGAGCAAAGAAAAGGAGTCAGGAATGGCTATTTCTCAGATTTTGACCTTTCTGTAAAGCCATTGTGGACTTTGTCATCTCTGAAGATCCCACTGGTGCTGTAGCTCATCTAGATATTGAATATCACATGGAACAGTTGACCTTCAAGGATGTTGCTGTAGAATTCTCTCAGGAGGAGTGGGAATGCCTGGACCCTGCTCAGAGGGCCTTTTACATGGATGTGATGGTGGAGACCCTCAGGAACCTGATCTCTGTGGATATCTCTCATATACATGTGGTCAAGAAATTACAACCAATAGCAAGTAGTGATAGAGGAGATGCATTCCAAACAGTGACATTGGAAAGAAAAGAAAGCCCTGAAATGAAATATTTTTGCTTCACGGAAATCCAGGAAGATGACTTTGGGTGTCAGTGGAAGAATGATGAAAGAAATTACAAAGGAATGCCTGTAATACATAAGGAAAATGTAACTCACAGAAGAGATAGACAAGGTAGGTGGAATGCAGGAAAGAAGCCAATTAAAAATAGACTTGTGTTAAGTTTTCAGGATGAACTGCATATATTTAAAAAAAATATTTACAAATGTCACGAGTGTGGTAAATTCTTTAATTATGGCTCCTCCCTCAGTAGACACCTTCTAATCCATACAGGAGAGAAATTATATAAGTGTGGTGTATGTGGCAATGTTTTTCGTCTAAAGTCACACCTTGTAAGTCATTGGACAACTCACACTCGTGCGAAAACTTACAAATGTGATGAGTGTGGTAAAACCTTTAATCACGGCTCATCCCTCCGTAGACATCAGATAAGGCATACAGGAGAGAAAGTGTATAAATGTGATGTATGTAGCAAAGTCTGTAGTCAGAATTCCTCCCTTAAACGTCATCAAAGAATTCATACCGGAGAGAGACCTTACCGATGCAATGAGTGTGGCAAAACCTTTAATCGTGGCTCTCACCTCTCCACACATGAGGTAATCCATACAGGCATGAAATTATGTAAGTGTGATGTATGTGGCAAAGTCTTTAGTCAAAATTCATGCCTTAGAATTCATCGGCGAATTCACAACGGAGAGAAACCTTACAAATGTAATGAGTGTGGTAAGGTCTTCCGTCAAAATTCACATCTTGGAAGACATCAGAGAATTCATACTGGGGAGAAACCTTACAAATGTGATGATTGTGGCAAGGTCTTTAATCAGTATTCAAATCTCGCAAGTCATCAAAGAATTCATACTGGAGAGAAACCTTATAACTGTAATGTGTGTGGCAAGGTCTTCAGTCAAAATTCAAATCTTGTGAGTCATCAGAGAATTCATACTGGTGAAAAACCTTACAAATGTAATGAGTGTGGCAAATTTTTTAATCAAAGAGCATACCTTACAAAGCATCAGAGAGTTCATATTGAAGAAAAGTCTTACAAATGTAATGAGTGTGGGAAGGTCTTCAGTCGAAATTCAAATCTTGAAAGTCATCAAAGAATTCATACTGGAGAGAAACCTTTCAAATGTAATGAGTGTGGCAGGTTGTTTTCTCAAAAACCAAACCTTGGAAAGCATCAGAGAATTCACACGGGAGAGAAACCTTACAAATGTCATGAGTGTGGGGAGGTCTTCAGTCGAAATTCACTTTTTGCAGTTCATCAGAGAATACATAACATAGAGAAGGCTTTCAGCTGTAATGAACTTGAAATGCCTTTACTGAGTTCTCAACCCTCACTAAGTATCAGATAATTTATACATGAAAGAAACTATGTAAGTGCGACATATGTGGGAAGTCTTCATTCAAAATTTACAGCGTACAATTCACTGGAGATTTCAGAGTAGGGAGAAACTAAGCAAATGCCATGAATATACCAAAGATTGTGTGCCTGCAAGCCTCATTTTCTATCACATAATCTATAGTGGAGAGAAACCTTATAAATGTACTAAGTATCTCAAAGTCTTCAGCCCAAGTTCATACCTTGAGATCTGCCAAATAATTTATACTGGAGAGAAACCTTTCAAATATAATGAGTGTGGCAAATCCTTCAGTGTCCAGCCCGAGTTACCATCAGGTGACCCATCCTGGTGAGAGACTTTAATAATACAGTGATACGACAAGGCTTTTAGCAGGTATCTACATCTTAGGCTTCATTGGACAATTCATTCTGGATAGAGACCAGATAAATGTATTTTATTGTGGTCAGGCCTTAAGAGGAGGAATTTATTAATTAACTCATTCTCAAGATTATCTCACAAATGCCATGGATGTGAAATAGTAATCTTATTGCTCAGGTAGGACAGTTTATATTTGTGAGTGACAGACCGCCTGGAGAACAGGGACTGAAAGTAGTAAGAGGTTTATCATTCTCATCTAACAGGAAGTCCAGAGGCTGCCATGTGGGGTGCGATGGGGTCCTCTGCCTCTGCAACCTCCATGAGTACTTAATCTTCACCTTATAGTAACATGACTGCTCTATGACTGAAAAGGCTGAAGGTTGAGGGCAAAAACCCTTTTCACTCTAAGGTTTTTGTATATTCTCCCTGGCTTACGCTCTTGTGACATGTCTAAGGACTCTGCATTAAGTTCCAGATTCTGAAGTTTTTGTTCTATAGCATTTTTCCTAAATCTCTTATAGTGTAAAGTTCCATAATTTGTTTTAGACCATTGTTTAACTTTTTGCTGATGTTTGACAGATGTAAAGTTTAAATGGAGAAATTTTCTTTTGTACTATGAATATTTCATTGACGAGCACATGTATGGGACCAGCCTTCCTTCATTGAGTTGCCTGGGTACCTTTGTCAAAAAGTAATGGGAAGTACACTTGACCCTTGAACAAGGCAGGGAGTTAGGGTTTAGTCTCCTGAGCAGTTCTAAATCCATGTATAATTTAATGCTATCCTGCTATATCTGTGGTTCTGCATCCTCAGATTCAACTGACCTCAGATCCTACACTGTAGTAATGTTTATTAGGAAACAATGCCCATATAATTGAATCCACACAGCTGAAACCTGTGATGTTCAAGGGTTAATGTCCTGTGCACTGTGTGCTCAGTCGTGTCTAACTCTTTGTGACCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGGTTTCCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCAGGGCTTCTTCCCCACCCAGGGCTTGAAACTGCGTCTCTTGAATCTCCTACATTGGGGGATGGATTCTTTACCCCTGTGCCATCTGGGAAAAACTGTAGTGATGGAGGGCTATTTCTTGTCTCCTCATTCTGCTCCATTGGTCTTTGCGTCTGTTATTCCACAAATCCCACACAGTCTTGATTCCTGTCACTGTATTAGAAATCTTGAGATTATGTGGGGCGATTCCAACCACTGCAATATTTTTCAGGTATTTTAGCTCTTCTAGTTCTTTTGCCTCTCTCTGTTATTTTTAGAATAATCTTGTTTGAATCTACAAAAATCTTGATGGAAAATGCATTAAACTTGTATGTCACTTGGGATATTTTAATATCACTTCTTATGTTGTATCTTCCAGTCAATTAATCTGGTATGTTTTATTAACAGTTCAGTGAATATCCTATGTTTCTCTCAGGTGACCTAAATAGAAGATCGTCTTTGATTTCATTCCTTCCCATTGTAGGTTTTAAGCATAAAAGTCTTTATCTTGTTAGATTTACACATTTTTCTTCTTTTTGAGCAAACATCGTATTCTATATTTAATTTCAGTTTCCATTTGTAAATTGCATGCATATAAAATTACAATAGATTTTTGCACGTTATGTCCTGACACCTTGCAAATTATACTTTTTTCTAGAAATTTGTATAGATTCTTTTGATTCTGTACGTGCATTATTTCCTTAAATTTCCTGTTTCTACTTTTAACAAGTTATCACAAACTGAGAGACTGGAAGGAACACAAGTCTATTCTCTTACGGTTCTGGAGGTCAGAAATGGAAAATGAGCCAAAGTCCTATGTTCCAGGATGCCAGAAGCCACTTAGATCCTTTGTTTCATGGGTCCCCATTTGTATCTGGATGGCACACACTTTGAAATAATGAATGATTTTATTCAGATGTCTTCTTGTTACATGAGCATTTTCTGAACACATTGTTTAATTTAGGGCACCCTGTCACTCCATCTTTGTACATGTACACCTTAATAGTACTTAACAGTATCATATATGATTTAATTATTGGTGACTTTCCCCTATAGAATATGCTCCTTGAAGGCAGGGTATTGATTTTATTTCCTGCTTGATATCCAGTGATTGAAACCATTTTCAACTGGCAGGTGTGTGAATGCACTTTATCAGTGCAAAGGGTTCTGTAATAGGTAGGCTCATAGAGCAGTAAGTCAAATAGTCTAATAAACATGTAATCATATTGTATTTGTGGCACCAAATTCCTTACTCTGTTACATTACACCCAAGCATTTTGAATGTTTGTCATAAATTCTCACAGTGTGATTTATTCACACATTGTGAATTTTCTCCAACATGTGCTAAACAGATCTAATTCATCAGTGAAGAAATGTCTTCATGAAGTTTTTTTAATCCACAACATTTTCTTTTTTTTTTAATTTATTTTTATTTGGAGGACAATTGCTTTACAGTGGTGTGTTGGTTTCTCCCATACAACAGCATGAATCGGCCATAAGTTTACACGTGCCCCCTCCTTCTTGAACCTCCCTCCTACCCCGTACCCCATCCCACCCCTCTAGGTTGTCACAGAGCACTGGGTTTGAGCTCCCTGTGTTATACAGCAACTTCCCATTAACTGTCTGTTTTACATATGTTAATGTATATGTTTCAGTGCTACTCTCTCAATTCATTCCATTCTCTCCTTCCCCCGCTATAATACACAATTTCAATTTAGGATTCTTTGAGTAATGCTCCATTCTACACCCATGACAAAGTAGTAATTTTTTTTCTCGGGTAGGATAGTTTTTATTCGTGGGTGAGAGGCCACTTGGCAAATAGTAACTGAAACAATTAGGTTTATCATTCTCACCAAACAGGAAGCTCCAGAAGATGCCATGTGGGATGTGATGAGTGCTCTGCCCCTTCAGCCTCCATAAGCACTTAGTCTTCAGTGTCCTCACAGCAATATGGCTGCTGAAAGACCAAGAAGAGTGAAGGTTGAGAGGCAAAACACTTTTTGATTATAGATTTGGTCTCATTTTCATGAAACAATAATCCTAGTCATTATTTTCTGATATTACTAGCCATTTGCATTAAATGGGTACCATAATTTTAATAATAGATGTGAAATTTCTAATTTAATATTTCTCTCTTGAACAAAGAAAAACAAAGGGGGAAAAAGTGTTAGGGAGAGATTATATCGAAAGACTTTGTTCTTTATCCCGAGAGTACAATATTCCACATAACATATGGTGACTTTGCCTCATGTTTGAAATACCAAGCAAAACTTTTTAGAGCCCTTATGTTTTATGAGTCAAAGATTTATTTCCTTTCTGCTCTATCTGATTCTAAATACACTTAAATAATTCACCATATTTGGGGGAGGGAGGGCGGTGCTATTCTATGTGGCTTGCAGGATCCTAGTTCCCTGACCTGGGATTGAACCTGCACTCTCAGCAGTTAAAGTGCCAATTCCTAACCACTGGACTGCCAATTTTGATATAGTTATTCTGATTCCAGTATCAGGGCAAGGAATCAAAGAACCCATTTTGAAATGCTTTTTAACCGTACCTGAATGTGAGAAATATACAGGAGGCTTGTAATTGGGAAATATTCTAACATCACTTCCAAATATATTTTAAGATTAGACTCATATTAATTATATAGTAATGTAACTGCTATGGAGCTTCCCAGGTGTCTCAGTGGCAAAGGATTTGCCTGCCAATGCAGGAAACACAGGAGAACTGGGTCTAATGCATTGCAGGCAGGTATTAATTATTTTAATATTTATTTTTATTTATTTATTTGGCTCTGGTGGGTCTTAGTTGTGGCTTGTGGGGCCTAGTTCCCTGACCAGGGATTGAATCTGGGCCAGCTGCATTGAGAATGTCCTGTCTTAGCCACTGGACCACCAGGGAAGTTTCATTCATTCGTTAATTGAGATATGGAAAGTGATACATTCAAAACAAAATAGTATCAAAATGTAAAAACAGTGTGCATATTTAAATCCCTGTCAAGCACTCTCTACTCCTGTTCTTTTCATTGAATTAACTTCAGTAATACTCTGTCTGCAGTGTTCTGAAATAAAACGAATTTTCCATAATCTATGGTAGACAACAAAGGGCTTCCTTGGTGGCTCACTGGTGAAGAATCCACCTGCCAGTGCAGGAGATGCGAGTTCAATCCCTGGGTCAGAAAGATTCCCTGGAGAAGGAAATGGCAACTTACTCTAGTTCTTGCCTGAGAAATCCCAAGGACAAAGGAGCCTGGTGGGCCTCAGTCCATGGAGTCACAGGAGTAGGACATGACTTAATGACTAAACCACCATCACCCCCACCATGGTAGATAACAGCTATTCCCTTTTAAAAGGGAGAGAGGATCTTCTCCTGTGGTCCACTGGTTCAGACTTTGCCTTCGAATGCCAGTGGTATAGGCTCAATTCCTGGTCAGGGAATTAAGATCCCACATGCCATGATGTGCAGCTAAAAACCAAACAACAAAAAAAACCCCATTGTTCCCCTGCTTTTTTTTTCTTCCACATGTAGCTCATCATGAAACACATATGAAAACCTCACTTTCACAGTGTCAAGTTCTACTCTACCTCTTGACCATCTGCTAGAATAATCTTGCATATAATCATCAATGATGGCCCTCATTTGTAACAACATATCTAGAGAAGGTGTCATGGCCACCAAAAACATGATATTTTATTTTTAAATTAATTTGTCCACATTGGGTCTTAGTTGCAGCACATGGGATCTTTTAGTTTTGGCATTTAGGATCTAGTGCCCTGACCAGGGATCGAACTCTGGCCTTCTGCACTCAGGGTTGAGTCTTAGCCACTGTACCACCAGGTGTGTGTGTTGTGTGTTAGTTGTTTAGTCATATCCAAATCTTTCCAACCCCATGGATTGCAGCCCACCAGGGTTCTCTGTCCATGGGATTCTCCAGACAAGAATACTGGAGTAGGTTGCCATTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCAAACCCAGGTCTCCCACATTACAGGCAGATTCTTTACCATTTGAGCCAGGGAAGCACATCAGGGAGGTCCCCAAAGCATATTTTAGATAATATTTTTACATATGTACTCTGGCTGTCCCCATGCTTTCAAATTTATACCATCTTCTTAAAATCAGTGTCCTAGTTTTCCTGGTCTCATAGATATGAATAAACCCCACCTAATGAAATAGGTGGGGTTTCATCTTACCCGTCTTTTCCTGAGACTATCATGGTGACAAATGAAACGCAGATAATGGAACAATAACATCAACAGATTTCAAACTTCAGGTTGTAGGTCATTAACAATGGACCCTTTTCACGAGACCTCAGATAATTGAGTAAACAATGTACTATCTACAGATAATTAGGTCTTTCCACAGATGTCTGATCCTTTGACAAGTATCAACTCATGGATTTTAAAAAATTTTAACTTTTAATTCTCTGTAGAATTTAACATCTGAGATTGGTTATTTCAAACCTAATAGACTGAGTTTCCTCCCACTGTAAGTTTTCTTATTTGTAAGTTCATTGAGAGGATTGTGTGAAGATTTATCTCCCCATTACATTTGTCATGTTTCTGTCTAGTGTGAATTCCTTGTGAAGTATCCTGAGTAATTGCTGTAAAGTCTTAACATTCTTGTATGGTTTCTATATTATATTAAATGGTTTCAAGACCACAAAGGCATATATATTTTTATAAAGTTAATCGACATTCAGTACATTTGTCAAGTTTCTCCCTAGAAAGAATTGTGTTATTTTCTACCAGGCTTAAAATTTGGATCAGCTTTGTCATGCATTTGTGTGGTTTTCCTCAAAAGTCTTTATTCTGATATCAAGTGAGGTGACTGCCCTGGTTATGGGCCTTGCCACCTATATTAATTAGTTTAGTATGGTGTCTCTCCTCAATGGAACATCTTTTTAATTTTAGTTGAAACATATTGCTGTACAATTTTTGTTTCAGGTATAATGTTTAATGTTTAATTTTTGCATACATTATGAAATGACCACCACAGTAAGTCTAGTAGCCATCTGTGCCCAAACAAAATTCTCACCATATTATTGACCCTATTATTTATGCTGTATATTATACATGCTCCTGACTTACTTACTGTGTAATTGTCAATGTGCCCATTTTAAACTCCTTCACATAATTCACTCCTCTACCCCATTCTGTAAATCACGTATTTTTTGTGTGTCTGTTTTCACTGTATTTTGCAATTTTTTCTCTTTTAGATTCTATAGATAAGTAAAACCATGTGGTATTTGTCTTTGACTTTTTTCACTTAGCTTAGTACCTTCCATGTTGTTGCAAATGGAAATATTTCTTTATTTTAGGGAATTCCCTGGCAGTCCAGTGGCTGATACTCAGTGCTTGCACTGCCAGGGCCTGGGTTCAATCCCTGGTCAAGGAACTAAGATGCCCCAGGCTGCACAGTCCAGCCAAAAAAAGAAAGATTTTATGCCTGAGTGATAGTCCATTCTATATATATACACACACACCACATTTTCACTATCCGTTCATTCATTCTTGATGCTCAACCCAGTCTTCACATTAGATCAAAGAAGCACTTTGTAAATACATGTTTGTGCCCTGACCAGAGTCCCTTTCAAATAAATGGGGTGAGAACCAACGTTAATTATATTTAAGGTTCCCCAGGTGATTCCAATCTGAATCCTTCATTGAGCTTCAGGACTCTGAGTCCTCCTATTCCTGAGGGCTGAGATCTGGGCTGAGCAGGGGCGTTCTACTCTGGGTAGGGATGGACCAGGGCCTGGTCTGTGACCTGAAGGGGACTGTCGTGTCTTCTGAGGTGCCCACTGCTGCTGTGTATGTGAGGGCCTCACCAGGAAGGGAGTAAGATCTGATGGAAAGTGTGGGAAAATGCTGTGTTGTTCTGTGTAGTTTACTGTCCCGAGTCCCGAAGATTTCAAAGACAAAAACAAATGGTTATAGAGTTGTAAGGCAAAATACTATTTTTAGTAGTATTTTACTCGTTTATCTTATTTGGGAATGATCTAGATATTTATAAACTACATATAATTTATCAAACATGTAACGTTTCCTGTTGTCAACGAGTTGGGGAAAGATATTTAAAAAGTTTACCTGGAACCTTTTATCTCATATACATTCAGTTAATTGGACATGTAAGCAAACTGCTGGAAAAAACAACTTTTTACTGTAACCGTTTTCAACTTGTTAGGATACATCTTAGTTTCACTAAGATGTTTCACTATAACTGGCCCAGCTTTCACCTTGAAACTGTAAAGAATCCGCCGCCCACTGCGGGAGACGTGGGTTCATCCCTGGTCGGGAAGATCCCACGTGCCTTGGGACAACGAAGTCCGTGGGCCACAACTACTGCCCGTGCTCTGGAGCCAGGGAGCTGCAACTACTGAAGCCTGTGTGCCCCAGAGCCTGTGCTCTTGGCAAGAGACGCCACCGAAATGAGAAGCCCACACACTAGAGGAGTCCTCTGCCCACTGCAGTTAGAGAAGCGCCCAGGCAGCAAGGAGGACCCAGCATCGGCCCACCCCCACCCCCCAAAGTGG EMBV3_41874 TCTCGATATTGGTCAGCCCAATTTGGTGATGTACAACATGGCTTAGTGAAATTATATGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27121 TGTGGGTAGAACATAAGGTCATGTGGCAGTAAGAGGCTGAAAAGTCAAAAGAAGGCTGCC Gene GeneID:508902|USP28:XM_002692994:165_cdna UTR3_Alt 3 NULL GeneID:508902 15 GENE USP28 NULL ubiquitin specific peptidase 28 EMBV3_42503 TTTGGGAGGGGACCTCAACGCCAAAAGAAAGCAGCTGAAAAGGCTGCCAGTGCCAACAAT Gene GeneID:540657|GABRB2:XM_002689355:25_cdna Constitutive 0 NULL GeneID:540657 7 GENE GABRB2 NULL gamma-aminobutyric acid (GABA) A receptor, beta 2 EMBV3_02787 AAAGCCTTAGCTCCTCAGGGAACTCAGGGTCCCAGGCCCGGGGCCAGGGCAGCAATAACA Gene GeneID:511497|RNPEPL1:XM_002686617:135_cdna Constitutive 0 NULL GeneID:511497 3 GENE RNPEPL1 NULL arginyl aminopeptidase (aminopeptidase B)-like 1 EMBV3_20034 CACAGAGAACCCGAAACCACCCTATGCCAGCACCCTATTGCTACCTTACCATAACCAATC Gene BVV0102_210814 - 1 EMBV3_02508 GK000022.2:57489839-57571206 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21354 ATGTATGACGAGATCATTGAGCTGAAGAAGGTGATCAACGGGCTGAAGCAGAGGGTCCTC Variant GeneID:618833|IQCE:XM_002698166:644_cdna 700^864 4 EMBV3_04695 GeneID:618833 25 GENE IQCE NULL IQ motif containing E EMBV3_36822 TATAGGAGGTAAGTGAGTAGGGAAAGACAAGGGCCGGTGCTCATAGGGTGGAAACTCTTG Gene BVT0102_013714 + 0 NULL GK000008.2:62722588-62891050 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03082 TTAATGGTCCAAAACGGTCTTCGAAGTCATCCGAAACTACTGATGTGCGGAGGTGGAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12081 AGAGGAACATCCGCCTGGATCTGAGGAGAGAATTAGAGCCTGCCCTGCTCCCTAGGACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02826 AGAGCACCCAAGTTTCTGCCTTCTGGAATATAGAGAAATAGTTTCACCCCTATGCTACCC Gene GeneID:535998|EPS15:NM_001098087:94_cdna Constitutive 0 NULL GeneID:535998 3 GENE EPS15 MGC151691 epidermal growth factor receptor pathway substrate 15 EMBV3_28558 CCCATTTTAAAGAGAAAGGAGTTGAAGCCAAGAGTGACAGGATGTGCCAAAGGCTGCTGC Gene BVT0102_121319 + 1 EMBV3_41465 GK000022.2:48247820-48264564 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21271 GTCGATGAACAGGGAAAGAGTACGGCCTTCTCTCACCACAATTCCTGCTGGGTTAATTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02335 TGACCCACTCTCTGCACTGAATTTCTAAGCCATTTCTTTCCCTGTCTTTATTTCCATCCT Gene GeneID:505200|CCNF:NM_001098870:66_cdna Constitutive 2 NULL GeneID:505200 25 GENE CCNF MGC157179 cyclin F EMBV3_02578 TATACTGTGAGGCGCGTGCTAAAGTGAATAAGCGAGTTTTCATGCTGACCCACTCAATGC Gene GeneID:100296271|LOC100296271:XM_002707833:2_cdna Constitutive 0 NULL GeneID:100296271 8 GENE LOC100296271 NULL similar to ELAV-like 2 EMBV3_27153 AACAGGGCCCAAGTTATGGTCATACTTGTTGCCCGTGATGTCATTCTGCTGAATACATAC Gene BVT0102_435027 + 0 NULL GK000007.2:97693395-98134114 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214672 1 XLOC_130744 NonCoding TCONS_00214672 XLOC_130744 NonCoding NonCoding - 7:97805617-97808559 - TSS160504 1459 1 TCONS_00214672_1 99 0.378341329677862 2 0.504590275416525 2.79761901349184e-05 9.64209085664155e-05 0.000298107694552408 1.7074964510338e-05 0 4.90343409830465e-06 0.000119912075666829 0.000137834135095506 1.62237121402572e-05 0 0 0 0.000222227009699878 0.000119292956630966 0 0 0 0 0.000216258513481581 6.96222817744589e-05 0 0 0 0 2.37440311128818e-05 1.93158906690507e-05 7.63014712089939e-05 0 0 0 NM_001102188.1 SGCB Bos taurus sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA. 3e-73 280 77.41 0.202193283070596 0 noncoding 0 0 0 0 0.0414536274377477 0.701714693219967 -0.0303718474746028 0.552646098180602 GTCTTTTAACTCCAATTTTACACACTCATCACACACAAGAGAGCAAATTCAAGAACAGCTTATTTTACAGATATTAGAAGGAAAACGGACTACTTAAAAATAAATAGTACTGAACTATCTCATAAAGCGCTTTCACATATAGTCTATTATTTACTTTTTGGGAACTGTGATTTCCATTTTATAGATTTAGGAAATTATGACATAGCATAACTTAAAGTTCTATAGGAAATCACTGATGTGGAACTAAAAGCAAAGTCCACCAAGTCTGGCTTGGCCTATGCTACCATGCACAGCACATGCGGAGATCAAATAGGATTCCATATTCAGAATTACATGAAAAAACCTACAAGTGAATATATTAATAGCAACAACCATAATAAGTGCTTTGGAAAGGAAAAAAACAAGGTCTCTGCTAAAGTCTCCACACAGTCCTCCTATAACTGTAGCCCACATCACCAAGAAAATCAGCATCAAAGATCAACATATATTGAGGATAAACCACAACAACTGAATAGGCAAATACAACTGCAGCCCTTGGACAGCAAGAAGGTCCAACCAGTCCATCCTAAAGGAAATCAGCCCTGAATATTTATGGAAGAACTGACGCTGAAGCTGAAATTCTAATACTTTGTCCACCTGATGCGAAGAGCTGACCCATTTGAAAAGAGCCTGATGCTGAGAAAGGTGAGATGGTCGGATGGCATCACCGACTCAATGGACATGAGTTTGAGTGGGCTTTGGGAATTGGTGATGGACAAGAAAACCTGGCGTGCTGCATTCCATGGGGTCGCAGAGTTGGACACAACTGAGCGACTGAACTGAACTGACTGACAACTACAGCCATTCTTTCACCAATAATGGAAAAGAAATATGCAGAGTCTTCATTTCACTAATGACTCTCCTGCCAAACGCTCATCTAAAAATTGGTTGTTTGAAGCAAAAATAAGATGCCATATTTTGCCAGTTGGCTAAACCAAAAGACTGATAATCATCGATAATCACCAGTGTTGGCAAAAATGTGGGAAAAGAAGGTTGTAGAAATATAAATTAGGACAACCTCTTTTGGAGAGCAATTTGGCAGTATTTATCAAAAATTTAAATGCACATACTCTTCCATCCAACTAATCCATTTCCGGGCACCTAGCCTAGAGACATACCCACACATACCTACATAAAGAGATATTATTATGTTTTTGGTTTTATTTTTCTCTCAAAGAACTTATTACTTTCTCAAATTCTTTGTTTGCAGACTATCTTCATACTAGAAGGTAAAGCCCTGTGGGAAGGGGCTCTTCAGTCTTGTTCGCCAGTGAGAAGGGCTGGGCTTGTCAACAGGGCCCAAGTTATGGTCATACTTGTTGCCCGTGATGTCATTCTGCTGAATACATACAATTCTTTGGTTTCTGATGCACTTTCTCCACCAATCCATTCATGTTTCTTTTATTTATTTTAGATAACG TCONS_00218136 r 5' 112062 TCONS_00218136 r 5' 112062 EMBV3_26686 TGGGCTCTGCCTGAAGACCGCTCTGGCTCATCTCACTCACAGCAGAATCCCTAGGATTTT Gene BVT0101_082468 + 1 EMBV3_32768 GK000024.2:21256993-21268845 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138575 1 XLOC_084685 NonCoding TCONS_00138575 XLOC_084685 NonCoding NonCoding LOC100847780 24:21257080-21269504 = TSS103812 1260 1 TCONS_00138575_2 98 0.203968253968254 3 0.898816710939387 0.00140842444222131 0.0012535470568268 0.00130405644367337 0.000913830468347792 0.000629347543036104 0.000344257122042154 0.000542843217232754 0.000520546624291588 0.000953479643620158 0.000304224886829322 0.000183511143279553 0.000185900061517378 0.000348229901319965 0.000954181873103544 0.000567288439918826 0.00442853037095856 0.0017221507030172 0.00202139341877904 0.000951458160449122 0.000660322451513522 0.000225013028848287 0.0011323225833914 0.000807638947916885 0.000747015096275655 0.000593358459132776 0.000929120166031946 0.000574047315481261 0.000496158910259849 0.000478135441052543 0.000955517214845074 XR_139032.2 LOC100847780 PREDICTED: Bos taurus uncharacterized LOC100847780 (LOC100847780), 0.0 2046 100.00 0.899206349206349 NM_001242875.1 ELP2 Homo sapiens elongator acetyltransferase complex subunit 2 (ELP2), 5e-63 246 85.78 0.172222222222222 0 noncoding 0 0 0 0 0.00618018569142652 0.967827545240943 -0.0337622586590718 0.54009187128667 ATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCACCAGCAGCAGGCAGCCCTCAAGCAAGCTGCGGTGGGAAGGGAGCCCAGGAGACAAGTTCATTGCCTGTGCTACCGCCAGGCCTGCAGTCGCCTTGGGATGCATGACAGGGAGCGGAGCAGACTCCCTGGACCAGCCTCTGCTCGTATAAAAAGCGCCCCCGAGGACCCAGTGGCCCACTGTGAGAGCCAGCCCTCCTGACCGTGCCCCCAGCACCGGATCTGGGAAAGACCCTGGCGGGGAGGGGCATGGAAGTGGTGGTTGTTGTGGCCCAGTCTGGAGGCATTGGGTACAGAGGCTGTAGCACCTGGGGTGGGCTCTGCCTGAAGACCGCTCTGGCTCATCTCACTCACAGCAGAATCCCTAGGATTTTACTCTGGAAGGAAGGAATGCATCGATGGATGGGTGCCCCCGTTTGCTCCTTAGCATCATCACCCAACCCACCTGCCTGTGCCACACCTTCTAGCCACGCTTGGAGCAGGAACCTTGGGCATCTCGGCCTCCGTTTCCCTACCTGTCCTCCTTCGGAAGAGGGCAGTAAATAATAAAATGTCCCAAACAGCAGCGTATGAAAACAGAAGATGAAAATGACACAAAATTAGGCAAATTTGGTCATGAAGAAAGGAGGGGCAGAGGCTCTCAATCAGAAACACACAGATGCAGGTCTGAATCCCTGAAAGCATGGGCGAGGTTCTGAGAGTATGTGCATATATAAACATTTTGAGAAAAGAGTCTGTAGCTTCCATCATATTTCAGAGGATCTGAGACTCATATAAGGACTACTGCCGTAAGGCTTAAAAACGAAACTCGATGCAAGTACGAGGTAAAGAAAGGTTATCCATTTACATGATAAATACTTTGCAGACACTGATGGGTGTATGCTTGTGGTCACTAGGTCCACTACAGCGCACATCTGTTGACTCTGTGTATCTTCACAGTGTGATCTTCACCACAGCTTGCAAACTGTAACCATTCAGCACCTTCTCCTTCATTCTGTTCAGTCTTTCCATTACAATTCTTCCAGCATAATTTTTTGATAGCAAGCGTATGACTTTGGCTAAAACAAAGAGAAATCATGAGATGAACATATGCTACGACTATGAAACATTTTACTGGCTGCTCAATTCATATTAATTAAATTAGTATGC EMBV3_29465 AACAGTATCCTACCAGGCCGCACATTGCAGGGACAGATATGGCATTTCTGAAGACTGCTT Variant GeneID:614427|METTL5:NM_001099135:43_cdna 424^719 1 EMBV3_20488 GeneID:614427 2 GENE METTL5 MGC152434 methyltransferase like 5 EMBV3_19391 TAGATTTCATAGAAGAGAAGGCATCTCAGAAAGAACAAGTATTTGTTTCCAGTATGAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30639 GCAGTAGTGATTGAGTGAAGGACTATAATCATATGCTCACTACTTGCTTTTGTTTTAATA Gene GeneID:784704|LOC784704:XM_002699980:59_cdna Constitutive 1 NULL GeneID:784704 X GENE LOC784704 NULL similar to DnaJ (Hsp40) homolog, subfamily A, member 1 EMBV3_05420 TGTGTCCATCATCGAAAACCTCACCTGGTTCTTGGCAGATTGTGGGCAGGTAACTTGTGC Gene GeneID:510832|CD1E:NM_001034394:6_cdna Constitutive 0 NULL GeneID:510832 3 GENE CD1E MGC128100 CD1e molecule EMBV3_17733 AACGCTTCAGTATAGATGGTGGTTTTATGGTTATGAAGAAACCAAGAATATATTGACCAA Variant GeneID:510620|ASAH1:NM_001075459:34_cdna 787^868 2 EMBV3_10351 GeneID:510620 27 GENE ASAH1 MGC140781 N-acylsphingosine amidohydrolase (acid ceramidase) 1 EMBV3_12582 TGGCCCGGAGCCCTTCCAGAGCCTCGCAAAAGAGAGTGAGATTTCTGATTGCTGAGAATT Gene GeneID:788205|LOC788205:NM_001105644:195_cdna Constitutive 0 NULL GeneID:788205 19 GENE LOC788205 MGC151566 hypothetical protein LOC788205 EMBV3_07140 ACCAGAGCTGTGTCATAACCATCCTTTGGGCCCTCTGCTGGAAAGTAGAATCAAGTCTCA Gene GeneID:505359|BAT2L2:XM_002694019:5_cdna Constitutive 1 NULL GeneID:505359 16 GENE BAT2L2 BAT2D1 HLA-B associated transcript 2-like 2 EMBV3_26824 TCAAACTGTATTCAGAGGGAGCCGAGTCCTCCTCACACTTGCTTTGAGGGCTACACAAGC Gene BVT0102_074068 - 1 EMBV3_14499 GK000001.2:144845411-144887618 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26904 CACGGTCAAAATGGTCTTCACAGCACTCAAAGTCAACGTCCATAGGTTCATCTACACCTG Gene GeneID:532674|GPR116:XM_002697270:26_cdna UTR3_Alt 2 NULL GeneID:532674 23 GENE GPR116 NULL G protein-coupled receptor 116 EMBV3_30126 CCAACAAAGGTGGAACATACCCCTGCTGACGTAACTACCTGTAATACACTTCTCGTAGGG Gene GeneID:281022|ARFGEF1:NM_173997:7_cdna Constitutive 0 NULL GeneID:281022 14 GENE ARFGEF1 BIG1 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) EMBV3_01520 TACAGAAGTTACCAATTTGTGCACAGTGTGGGTGCAATATGTGACTTCTGCGAAGCTTGG Variant GeneID:533230|ZNF330:NM_001038157:35_cdna 335^414 1 EMBV3_40604 GeneID:533230 17 GENE ZNF330 MGC134446 zinc finger protein 330 EMBV3_08132 CCCTATCGGAGGAACCAAAGTTCCGTGCGTTTTGCTCAATTCCGTTTTTGCTCTGTGACC Gene BVT0102_186426 - 0 NULL GK000009.2:96643276-96765673 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10330 AGGAGGTGGTGACTGTGCTGGAGGATTTGGAGAGGGAGCTTGATGAACCTAGACAGCAGT Gene GeneID:100337288|LOC100337288:XM_002697483:147_cdna Constitutive 0 NULL GeneID:100337288 23 GENE LOC100337288 NULL SCAN domain containing 3-like EMBV3_12151 CAGGCAGAACCTGAAAGGGCATTTTGGCTCCGGGGCATCTTGGATTTAGAACACGGACTA Gene GeneID:540245|NR4A2:NM_001076208:136_cdna Constitutive 0 NULL GeneID:540245 2 GENE NR4A2 MGC139338 nuclear receptor subfamily 4, group A, member 2 EMBV3_38876 CCCACAGTATAAGGTATTTGGCTAAACAAGCCATTAGGGGGAAGTACTGAGATTTGGGGG Gene BVV0102_310171 + 0 NULL GK000002.2:107428756-107462686 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103314 TCONS_00103312 TCONS_00103313 TCONS_00103315 TCONS_00103311 1 XLOC_062072 Coding TCONS_00103313 XLOC_062072 Coding Coding TTLL4 2:107391978-107432234 j TSS76743 6817 1 TCONS_00103313_5 887 0.151679624468241 18 0.831101726493603 0.00175009948043531 0.00111635016766449 0.00176530441941558 0.00132927481830741 1.86617440569379e-05 0.000568528550857298 0.00110450907766334 0.00105654142444117 0.00181477181330798 0.000541143704603984 0 1.96633243944434e-09 6.96032877787715e-05 1.89580698891165e-126 0.000245045074058083 1.18848187134623e-28 0 0.00143866669077261 0.00108198254531947 0.00199331593514846 8.98852410434002e-05 0.000330393299559933 0.00134260782021632 0.000918671855329515 0.00234269593939982 0.000858171906526297 0.00070062597635055 0.000223246130588825 0.000181592772590779 0.000289967547156801 XM_005202837.1 TTLL4 PREDICTED: Bos taurus tubulin tyrosine ligase-like family, member 4 (TTLL4), transcript variant X1, mRNA. 0.0 2489 100.00 0.20228839665542 NM_014640.4 TTLL4 Homo sapiens tubulin tyrosine ligase-like family, member 4 (TTLL4), 0.0 1874 81.83 0.273434061904063 TCONS_00103313_5 sp|Q14679|TTLL4_HUMAN TTLL4_HUMAN Tubulin polyglutamylase TTLL4; 0.0 1090 81.72 0.742953776775648 1 coding 1 1 1 1 0.0300822439243 0.844689584365011 -0.0507783906193996 0.463382321273691 GTCCCACCCGCGTTAAAGTGGCTGCGCGTGCGCGAGCCCTGTGACCGCCGCCTTTCCAAGCTCCATTAGCCCCGAGATTCCGCGCGCCTGCCTCCCTCCCGCTGGGATCGCCCCTTCAGGCCCTCCGTGCGTCCGCTGGGGGCGCGCGCAGTGCGTGTCTGGTGGCAGCCGCGCTGGCGGCTGAGAGCGCGGGTCGCGTGGCCGTGCGTGGTTGCTAGGGGAGCCTGAGGCCGCCAGCTCGCCCGCAGGCCGAGGGAGGAAGCAGCGCGGAGCCGGCGCCCAGCCGCGGCGAAGCTGAGTCCGCTGGGCTGACGGACTTCAAGGATGCAGCTGCTACTGCTGGAGGCATCTCGCACCTCACCTGAGCCAGGCCATGAGGCCATGTGGCCGTGATGTGGGCTCCTCATGGCCTCAGCAAGAACAGAGCACTACGATATCAGCCTCCGCCGGGGACACAGCTTGAAGCAGAGTGGGCCCACGGGCACAGCACCTACCCTGTCACCCGAGAAACCCTCCGAGGGCAAAGTCTGGGCTCAGGCTCATCAGCAGGTGAAGCCAATCTGGCGGCTGGAGAAGAAACACGTGGGGACACTTTCAGCAGGGCTGGGCCCAGGCCTCTTGGGTGCACCCCCGCAGCCAGCGTACTTCTTTTGCCCCAGCACTCTATGTAGCTCCGGGACCACAGCTGTCACTGCAGGCCACAGCAACTGCTGTTACCTGCACTCCCTCCCAGACCTGTTCAGCAGTACCCTGATATACCGCCGCTCCAACTACAGGCACAAAGCATACCAGCAGCTGGAGTCTTTCTGCTTGCGTTCAAGCCCATCAGAAAAAAGACCTTTCTCTCTCCCTCAAAAGAGGCTCCCTGTCAGACTCCCTGCCAACAAGGCCACGTCTTCCAAGCTCATCCCCATGGCATCCTCATCCACGGAACCATACTCCTCATTGGGAGCAGCCGGGGAAAGTCTTTCAGGGAGGAGCCTGGCCTCTGCCATCTCAGGGAAGACCCCATCTCCACTCCCCTCTTCTTCCTCTTCCTACAAACCCATGCTGAACAACAACTCCTTCATGCGGCCAAATAGCACTAAAGTGCCTTTATCACAGGCCACAGAGGGCCTGAAGCCACTAGACCCGGTTGAAACTGAAGATCTGGAGGAAGAACTACTAGATGGTTTGGAAGACTGCTGCAGCCAGGTTGAGAACGAAGAGGAGGAGGGAGACTCAGAGTGCTCCTCGTGCAGTGCCGTCTCCCCCAGCGAGTCGGTAGCAGTGATCTCTCGGAACTGCATGGAGTTTCTGACCAAACCCCTTTCCAATGAGAAAGTTGTTCGACCAGCCCTCATCTACAGTCTCTTTCCCAACGTGCCCCCCACCATCTATTTTGGCACTCCAGATGAGAGAGTGGAGAAACTTCCCTGGGAGCAGAGGAAGCTGCTCCGGTGGAAGATGAGCACAGTGACCCCCAACATTGTCAAGCAGACCATTGGACGTTCCCACTTCAAGATCAGCAAGAGGAATGATGACTGGCTGGGCTGCTGGGGTCACCACATGAAGTCTCCTAGTTTCCGATCCATTCAGGAGCATCAGAAGATTGGGCGCAAGGACCGACTGTGGCGGAACCTGTCCCGCATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGTCCTTCATCCTACCCCAGGACGCCAAGCTCCTGCGCAAAGCCTGGGAGAGCGGCAGCCGCCAGAAGTGGATTGTTAAACCACCAGCGTCCGCTCGAGGCATCGGCATCCAGGTCATTCACAAGTGGAGTCAGCTCCCCAAGCGGAGGCCCCTTCTGGTACAGAGGTATCTCCACAAACCCTACCTCATCAGTGGCAGCAAGTTCGATCTGCGGATCTATGTTTACGTCACCTCCTACGATCCTCTACGGATTTACCTCTTTTCAGATGGACTCGTCCGCTTTGCCAGTTGCAAGGCACTGAAGGCTTTATGGAGCTACCTGAGCCAGAAGGGAGTCAACAGTGATGCCATCTGGGAGAAGATAAAGGATGTCGTTGTCAAAACCATCATCTCGTCAGAACCCTATGTGACCAGCCTGCTGAAGATGTATGTGCGGCGGCCTTACAGCTGCCACGAGCTCTTTGGTTTCGATGTCATGCTGGATGAGAAACTCAAGCCCTGGGTTCTAGAAGTGAACATTTCCCCCAGCCTCCACTCCAACTCTCCGCTGGACATCAGCATCAAAGGCCAGATGATCCGTGACCTTCTGAACCTGGCAGGCTTTGTTCTGCCCAATGCAGATGATATCGCTTCCAGCTCCAGCAGCTCCAGCAGCTCCACCACCAGCTTGCCCAGCTCACCCAGGGACAGATGTCGAGTGGCCCCAGAGTACTTCACTGCACAGAAGATGAAGAAAGCCTATTACCTGACCCAGAAAATTCCTGATCAGGACTTCTACGCATCTGTGCTGGATGTCCTGACACCAGATGATGTTCGGGTTCTAGTTGAGATGGAGGATGAGTTTTCTCGCCGTGGTCAATTCGAACGCATTTTTCCATCTCGAATCTCTTCTCGCTATCTCCGCTTTTTTGAGCAGCCACGATATTTCAACATTCTCACCACCCAATGGGAACAGAAGTACCATGGCAACAAGCTCAAAGGAGTAGATCTGCTTCGGAGTTGGTGCTACAAAGGGTTCCACACAGGAGCCATCTCTGATTCTGCTCCAGTGTGGACTCTCCCGGCCTCAGTTCTGACTGTCCCAAAGGCTGATGCGACACTCAGTGATTTCTCTAAGCCAGAGACTGTCAAGCTGAGAAAACATGGCTCCACTGAGCGAAATATACCACTGTCTGAAGATGGGACCATGCCCAAGCTGAAGAAGACCCAAGCTGGCCTTTCCTCTCCTCCCAGGAAACTCAGTTCCTCAGAGGACAGTGAGGACACCAGCAAAGAGCCCAGTCTCTCCACCCAGTTGTTACCTGTGATCAAGTTCTCTGGGCAGACTTCGAGACTCTCCGCTTCCACCAGCTCCCAGTCAGCTGGTGGCTCCCTCCTGGCTGCTGTGAGCCTGTGACAGGCCTCTCTCCACTTGCCTGCCCAGGCATACCAGCGTCAGCTACCTCACGGGAACCGGCCGGCCGGGCAGCCTGAGCCCCCACCCCCTCCACTCTGCCCCTCCTCAGAGTATTTTTTGAAGTGGTTGAATTGTAGAGATGGGTATTCGGCGGGCTGAAGGGGTGGTTGGGAGGGGGAGAAGGTGAGACAGGTTCACTGGCTGGCACCTCATATCTCAGCAGAGAAGCTAATGATGGCTACTCAGCCTTATAAAGCAGGGTTTGGTTTCTACCTTCAGAGAGCCACGTGTGGTTTGTTTTGGTGCAGTGGTGTTGAGTTATAACTCAAGAGGAGAAAGCATATTGAACATATTTGGGCCTGAAGTCCCTTGCTCTCTATATAATTGAAGAGATTGCTCTGAGGGTCCTTATTTCCTCAGGTCTCACCCTCTCCCCTTCCCAACCCCCATCCTGAGGAGTCACTTTCAGAAACCTCCAGGCTTCCTCAGTACTTGGGCAAACAGAGACCATGACATGCAGAATCAGTTTCCTGTCGTCCTTGTCTTAAGGACATCACCACCTCCAGACTGTTTTTCCTTTCATGTACCCACCCATCCAGTAGCCCTTGGTCTTCCTGCTCTGACCTCACATCACTACTTGTTCAGCCTTCTAGACTTCCCTCTCACGGATGTTACCTCTTCAGCTCTTAGCTTTCTGTGAGGTGAGAGCTTCTGTGAACTTTGTGAATTTCTCATGGCTGCAGTAAAGGAGCCCAGATAATCCTAAGAGAAGGGTGGAGGAGCTGATGTTCCCCCTTCACTCTCTCTGGTGATCGGGGTCTGGCTCACAGGTCTCTGGGGCATGCAGACTCTGGTGGCCTGGCGGGCAGGTTTCAGAAACAGCCAACATTGTAGCATGAGCTACCAGTCAGGGCTCCTGGCTAAACTCTTACACACTGAACTGGATCTACCTCCTGCCCCAAGACTCAGCCAGCAGTGAGTGTTCAATAAATGTTGTTCACGTGAACTAGAGATCTCACAGGATGTGAACACCTAAACCAGGTTTCCTCCTGCCTGGGCTGAAGTGCCACCCAGGGGGAAGCCAAGGTGGGAGAGTTTGGACCAGAAAGTTTGTTTTCACTTGAACTATGCGCCTCCTTAACTTGACACCTCCTGGTTGCCTCTCGGCCCCCTCCCCAGCCCTACAGTCCTTTCTTTCTTCAGTTTATTTTTCTCCCAGCAGGGCCCAACAAGAAGCCAATTGGTCCCTTGATTCTGACACCCAGGTTTTCCCTTTAGTGCATCAGGCAGGAAGCTCTGCTCACGGTCTGACCCCAGACCGTGAACAAGGCTTTCTCTGCCTTTGTTCTTGAGCTTTGGAAAGATAGCCTGCTCCATTCCCTGCTATGGGAGTTCTGTGGTGAGTTGGAAGGGAACCCTGGAAAAAGCCCTGAGAGGCCTGACTGGGTTCAAGGCCATACCGCTGATATGTGAAGGCCATGTTGACAGCTGTGAAGAAAGCTGGATAGCGAAGTCCTGGGGCATCACTGCTTGATGGCAAGGACTTCAAAGTCAGGGCCACAGGAGAGGTGCTTGACAGTCCTGTTCATTCTCTTCTGATAGCCTGGAAGCCAGCTCCCTCTTGTCCTCTGTGGGTGCCATGTCCTAGTGCAGATGTCAAAACAAACCTTGTGACGAGGACAGGAAGCAGCCTTCCTATGAGACCAGCCACCCACTTAAGCTGTTTGGCTGTGGCTGGTCTTCTGGTGCAAGGGCTTAGGTGCGGAGGCCTGACTGAGCTGTGCTACTCCCTGGAAACCAACTTCAATACCATGCCTCCGAGAATCCCCAGAGAGCACAACTACCTCCGTTCCCATAACTGGAGAAGGGACCGGCCTTGCAGTATGATGAGAGGCAAGGGAGTAAGTGGTGGGGAAATAAAAGGAGTGGTGGGCATAGACTGTTTTCAGTAGTTTAAAGGGCTTCCCTGGTGGCTCACACAGTAAAGAATCCACCTGCAATGTGGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGGAAGGCATGGCAACCCACTCCAGTATTCTTGCCTAGAGAATCCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATGGGATTGCAAGGAATTGGACATGACTGAGCACCTAAGCACAGCAATAGTTTAAAACATGTTTGTACTTTTTAAAGTTTTCATCACCTTTGAGTGTCTGATAGATGTGAGTGTGTTGCTGGATGGGAGAAAGGAATGAGGTTTATGTATCATACTTCCCTTTCAGCCTTGAGAGAAAATGATCTTGCTTATTGACCATTCAGCATACATACTTAGCAGTGCATACCCACAGTATAAGGTATTTGGCTAAACAAGCCATTAGGGGGAAGTACTGAGATTTGGGGGAAAGTTTAAATTTGAGAATGTTGTTGTTCAGTCGCTTAGTCATGTTCCACTCTTTACAACCTCATGACTTAGAACACACTAGACTTCCCTGTCCTTCACTATCTCCCCAAGTTTGCTCAAACTCATGTCCACTGAATCAGTGATGGCATCCAACCATCTTGTCCTTTTTCACCCCCTTCTCTTGCCTCAATCTTTCCCAGCATCAGGGTCTTTTCCAAGGAGTCAATTCTTCACATCAGGTGGCCAAAGTATAGGAGCTTTAGCTTCAGCATCAGTTCTTCCAATGAATATTCAGGTTTGATTTCCTTTAGGACTGACTGCCTTGATCTCCTTGCTGTCCAAGGGACTCTCAAGAATCTTCTCCAGCACCACAGTTCAAAAGCATCAATTTTTTTGGCACTCAGCCTTCTTTATGGTCCAACTCGCACATCCATACATACTAGTATGTCCATCCATACTACTGGACAAACTATGGTTTTGACTGTATGAATCTTTGTCAGCAAAGTGATGTCTCTGCTGTCTAGGTAGGTCATAGCTTTTCTTCCAAGGAGCAAGTGTCTTTTAATTTCGTGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAAGAAAATAAAGTCTGTCACTGTTTCCATTGTTTCCCCATGTATTTGCCATGAATTGATGGGACCAGATCCCATGATCTTTGTTTTTTGAATGTTGAATGTCAGTTTTTTTCTAAATTGATAATGTACCTAGTCCTTGTTTGGAGAAAGGGGAGCAAGTGCCCTTGAGGCAAGAAATGCCATGTACCGGGTATTTCTGAAGCACTGGAGCAAGGATTTGAGGGCAGGGGCAGCAGCAAGGAGGGTGATCACTATTTGTTTACTTCCGATTTACTCAAGCTTGATCAGACACTAAGGAACTTAGAATGAATACTTAATAGAAAGGTGGCATGGGGCTAAGAAAAGAGCGTGGATCTTGGGAGTCTAACATCGGGTTCAAATCTCTGTTCCTCAGTGCAGCCTTGGGCATGTCATCTAGCTTTTTAAAGTTTTACAATAATACGAATTTAATACCTGCATTGCAAGGTTATGGAAATTATGGGTAGGGAAAGGCAGGCTAGAGATGTAAAACCCTTTCCATGGGGGAATGAAGGCACTCTAGAGACATTTTAGAAGTGAAGAGGCCGGGACAGGGTTTAGATACCTTATCACGCCTACTTCCACCCCGGTGCACAAAGAAACCCCATCACCGTTATTCATTCTACTATTTCACTCTTTGTTGGGGATTTATTTCTTTGGTTAAATATTTCACAGACAGAATGCAAATTAAAAGTATGTGAATTGGGCTTATTCAGT EMBV3_25159 ACGGGACCTGCCCTACAGCCACGCCTACATCCCCGCGCTCTACCTGGCGGCCTTCGCCGT Gene GeneID:100299334|LOC100299334:XM_002694239:189_cdna Constitutive 0 NULL GeneID:100299334 16 GENE LOC100299334 NULL similar to G protein-coupled receptor 15 EMBV3_07321 CTTCTCTCTTATTACAAGGCCTTCGGCGTCAGTGCGTCTGGGCTATCAGCATCTTCTCAA Gene BVV0102_220782 + 0 NULL GK000016.2:81329502-81338732 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068412 TCONS_00068411 1 XLOC_041679 Coding TCONS_00068411 XLOC_041679 Coding Coding CAMSAP2 16:81277782-81331666 j TSS51226 4732 2 TCONS_00068411_3 406 16 0.912477033572741 0.000803989829657143 0.000319631835073105 0.000865904260634981 0.000462931200644531 0.000525511952108524 0.000119439920794527 0.000523895958280977 0.000531531326672727 0.00102373530824433 0.000421618568195178 0.000229402670792021 1.37870421355688e-10 0.000104239287885891 0.00025457296972265 0.000207270756869493 0.00312875518243028 0.0024173630572251 0.00168533574913322 0.000318186715217178 0.000988886415213392 0.000426634508980366 0.000850387364451568 0.000948223781015034 0.00156081666885372 0.00079447611315026 0.000560122098048783 0.000603849507680276 0.000486242572410725 0.000456131440562648 0.000432482493214674 XM_598625.7 CAMSAP2 PREDICTED: Bos taurus calmodulin regulated spectrin-associated protein family, member 2 (CAMSAP2), mRNA. 0.0 6338 100.00 0.742392223161454 NM_203459.1 CAMSAP2 Homo sapiens calmodulin regulated spectrin-associated protein family, member 2 (CAMSAP2), mRNA. 0.0 2122 81.12 0.474852071005917 TCONS_00068411_4 sp|Q08AD1|CAMP2_HUMAN CAMP2_HUMAN Calmodulin-regulated spectrin-associated protein 2; 0.0 617 94.75 0.882513661202186 2 coding 0 0 0 0 -0.0471165359947302 0.793905928354444 0.0392809775454949 0.60466628270739 ATGTGCGTTGCTTCCCCTGTTGCCCAGGAACCTGGCTCTGGTCTTGGGGTTGAGGTTCCCTGCGTCCTGGAGGCTGAGAAGGCGGACGAGGCCTGGCTGGTGGCTGCCTGTGTCCTGTGGCTGCGGCTGCACGTGAGCCTGCTGCTCAGATGCCCGCCTTTCCTCGGGGCAGGAGTCAACGCTCGTTCTCGCCGGGCCTTCTTCCTGGGGAGTGGCCTGGCCTCCAGAGAGACACTCAGAGACTGGTCCCGTTGCTTAGCTGCCTGCCAAGCAGGGCGGGAGAGGCCAGCGGTGGGAGGCAAGGGGACAGCAGACGGTGGGCACACTCTCGGGTGTCGAGGCCTGGGGTCCCTGAAACGGCTGTTAGCCGCCTTTCCTGAGAATGTGCCAGAGGAGCTCCGAGAGCCGTTCTACACGGACCAGTATGACCAGGAGCACATCAAGCCGCCCGTGGTCGGCCTGCTGCTCTCGGCCGAGCTGTACTGCCGCGCCGGGAGCCTCATCCTCAGGAGCGACGCTGCGAAGCCCCTGCTGGGCCATGACGCCGTCATCCAGGCCTTGGCTCAGAAAGGCCTCTATGTCACCGACCAAGAGAAGCTGGTGACAGAGCGAGACTTGCACAAGAAGCCCATCCAGATGTCTCCTTCCAAATGGTTTTGGAAACTGGTTCCTGCTCGTTATAGGAAGGAGCAGACCTTGCTCAAGCAACTGCCTTGCATTCCGTTGGTAGAAAATCTGTTGAAAGACGGCTCAGATGGCTGTGCGTTAGCTGCCCTCATTCATTTTTACTGTCCTGGTGTTGTCAGGTTAGAGGACATTTGCTTGAAAGAAACCATGTCTCTGGCTGATAGCCTCTATAACCTGCAGCTGATCCAAGAATTTTGCCAAGAATATTTGAACCAGTGTTGCCATTTCACCCTGGAAGACATGCTCTACGCAGCTTCCTCCATAAAGAGTAACTACCTGGTGTTCATGGCCGAGCTCTTCTGGTGGTTCGAGGTCGTGAAGCCCTCCTTCGTCCAGCCCCGTGTCGCTCACCCACAAGGAGCTGAGCCTGTGGAGGATCTGCCATCACTTCCTGTCTCGAATGCTGCCCCCCAAGATGCCCTGGACAGCTCTGACCTCACGCCAGGTGGGGAAGGAGCTGCGTTCACACACTCTCGTCCCCATTTGCCTTCCAGGCACTTACAGCCCCAGCCTCATCCTTCAGCCTCAGGATGATCAAAAGGCAGAAAATGATATGGCCATGAAACGAGCAGCTTTGTTGGAGAAACGATTAAGAAGGGAGAAGGAGACACAGCTTCGGAAGCAGCAGCTGGAAGCCGAGATGGAGCACAGGAAAGAGGAGACCAGGCGCAGGACGGAGGAGGAGCGGCAGAAGAAGGAGGACGAGCGGGCGCGCCGTGAGTTCATCCGGCAGGAGTACCTGCGGCGCAAGCAGCTGAAGCTCATGGAAGACATGGACAGCGTCCTCAAGCCCCGGCCTCAGGTGGCCCGGCAGAAGAAGCAGCGGCCCAAGTCCATCCACAGGGACCACCTCGAGTCCCCCAAGACGCCCGTGAAAGGTCCCCCAGTCTCGAGCCTTTCTCTGGCATCACTGAACACGGGCGATAACGAAAGCTTGCAGTCAGGGAAGAGGACCCCGAGGTCAGAGTCTGTAGAAGGCTTCTTATCTCCAAGCCGGTGTGGCAGCCGGAACGGTGAGAAGGACTGGGAGAACGCATCCACCACGTCGTCCGTGGCCTCAGGGACGGAGTACACAGGACCAAAGCTCTTCAAAGAACCCAGTGCAAAATCCAATAAGCACATAATACAAAATGCTTTAGCTCATTGCTGTTTGGCTGGAAAAGTAAATGAAGGTCAGAAGAAAAAAATACTGGAGGAAATGGAGAAGTCAGATGCCAACAACTTCCTGATCTTATTTCGGGACTCAGGCTGCCAGTTCCGGTCTCTGTACGCCTACTGCCCAGAGACTGAAGAGATCAGTAAGCTGACTGGGATAGGCCCTAAGTCTGTCACTAAAAAGATGATCGAGGGCCTTTACAAATACAATTCTGACAGGAAACAGTTCAGCCACATCCCTGCTAAAACTTTATCTGCCAGTGTTGATGCCATTACCATTCACAGCCATTTGTGGCAGGCCAAGAGGCCAGTGACGCCCAAAAAACTGTTACCCACTAAAGCATAGGAACTGGGAGATCCTGCTTCTGAACGTTCATGGTAAGTTTGCACTTCATCCCTCCTGCCTATAGAAATCCTTTCTAATTGCCAACAGACTTTTATTCATTGAAACTGGACGTTCAGCCCTGTTGTCATGACAACTGGAATGTAGACCACAGTGCTGGAGACGCACCGAGGTGCCGGGCCAGGTGATGGCGATGTCTGGCTCGCTGGGGGAGGTGTGCCTGCTGGGCTCTCGATACAGCGAAGCACTGAGTTCTTGCGGAGGCTAGTTGACGTAAGGCTAGGATCATCAGCTGTGTGTTTTGTTTGTTGCTGTTTTTTTAACTTTTTAACGTATATGAGTGTCTTCAGATGGTTTATTTTGCTATTTTCCTCCCCTGGAGTTTGTTCCAGGATAACGTTTGTATTTGGGTTCATGTGGAGATCACGAGAGTGGGAAATAGGCCTGCGGAGATAGCTCGCGCGGTTCTTAGGACGCAGAGAAAACTAGTGCCAGCTCCCCAGTAACCCTCGTGCTTTAGTGGCGTCAGAGCGTTGGCCGAACTACCCTGCGAAGTATTTACACTTCTGTATTTATTACTCACTCAAGTATTACCATTTTCCTATGAAACAAGAGGAGGAGTTGTAAAGAGCTGCTATAGTTCACTTAAAACCACGTGAGCTTAACCGAGAAATGTTATAAGAAGTTGCTGATTAAATCAGTGCTGTTTTTACACCACTTCTGGCCGTCTCAGAATAATTTAGATTGTTCTTTTAACAAAAAGGCTTTCTGTCTCTTTTGAAGCACGTCACTTTATAAGCTGGCAGAAATGAACGGCACTTTGAGAGTAGTCTGAAGATGGAAGACTTCCTGCCACAGGCTCTTGAGAGGTCTTTCCGTTGTATTTATAGCTGATACAAAAGATACATTTAGAGTTTTTAAACATGTACAAAGGGCTACGTTTTAATTTTAAAATAGCTTCACATTCTTTCACTGATTCTGAGTTTTTCTTTTTCATCCTTTTCAAGTGGGACACCTTAGATTAAATACACACTTGAACTCTTCCCTACGTGATCTTTGTTCCTATAACAGTGCATACCAGAGGGTTAGTTGGGGAAAAACTTCATTCTCAGGAAAAGACTTGAACGATTCTGTGATCCTGTTATGTTTCAGTGTTGTGACAACATGTAGCCTTAGAGGGAAGACAGTATTGTGGCATATGTGAGATGCATAGTCTGTTTTCTTTCATGGGAAGTAGAGACAAAAATATATACATTTCTCTAATTGAGTTGTTCAGAGAAATAACTAATATCTCATATGATGATGTATTCACTTATTTTTAAAGAGAGGAGGAGTGAGGTGTCCCTGGACTGTGCTTCTCTCTTATTACAAGGCCTTCGGCGTCAGTGCGTCTGGGCTATCAGCATCTTCTCAAATGCTGTCAATATTTTACTGTAATTTATGTTCTTATATTTATGTATATTTGTTTAAACTGTAAAAAAGAAAATTTCACAGATTTTTTTCCAATACCTGTGCAAGATATGTGTGTAGCTCAGAACTATTTGTGATCTGCTGTTTGCATGTAAAAGACCAGGATATATGTAACTCTTATATTTTAAGTGTATACATATTGTGTATATAATATATGAAGATTAAAACTGATGGATTGCACATTTTACCTTTCAGACAACCATTTCGGTCACAATTAGAAGGAAATGATTGTCAAATAGATTGACTAGTTTAAAAAAATAGTGAACCTAATCAAAATGCGGTAATAGTCAAAAGGAGAGTTAACAAGCCTTCAACATTACTAAATTTGTTCTTTTTAATCAATGAAATTTCCCTTATCAAAGCAATCTTTTTGGTGATACTACTTGGCCATTAAATTTTTTTAAACTGAATGCAAGACAGTGGAGGAAGTGACTATGTGAGACCAGACAGGCCCACCCTTTGTTCTCAGGCCTGCCTGTGCCCAGTGGTGTCTGTGAGGTCTGAAGGTAGAATGTGAATATTGCCACAAAAGTTCCTTGCTCTCAGTATGATGGTTTACTTTATTCATGCAGAAGGAATATGGATATATTTAAGTCTGTGGATTTTTTTAAATTATGTTTTTAAAATTATACAAATGAGAATTATGCTATTTCATAAAGTCTGGAGATAGTCATCAACTTATTGAAACACATTGGTGCTTCTCATCATCGGAGGTCACGTTGTTGGATAATTACTTGGTTGAGTTTGCCAGACCCTTGTCGCGGTCCCCCGCGCGGCCTGTCAGGTTCTGCCGTGCGACAGGCACTGGAAAGCTTTTCATTCCCCTCAGCTGCTCAGTTGTGTTATGACTGTTACAGTTCAGTTGGCTGTTTTTAAAGCCAAATCCAGCTTTTTAATTGTGGTTCCATGGACACTTGGGGCGATGTACAGCGTCTGGTGTGCTGCCTGTCCACTCGGGAGCGTCGCTTACAGGTTTTTTTTACGATGCTGTGCTGTAAAATACTGTCCTATTTGCTACTTCCTGGTACAGTGTAGTTTTTCCCCTTTCATTTGAATAAAAGCATGGCACCAAATGTC EMBV3_04550 GGCGCAGTGGACAGGCGAAGGAAAGCGCGGGGGATGAAAGAACAGAAACTTGAAGCCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18870 GGAGCCAAAGCAACTCGCTTTCTACCGCTGAGGTGAGGCCTCGATGGAGAGGTTCCTGGC Variant GeneID:508399|ABCC10:XM_002697300:138_cdna 272^515 1 EMBV3_31909 GeneID:508399 23 GENE ABCC10 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 10 EMBV3_14765 TTCACCACCTTTCTCTGCTACAAATCAAAACACAGTCTGTGTGGGAGTTGGTGCCGGCTG Gene BVT0101_068515 - 1 EMBV3_23794 GK000018.2:14003633-14053450 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088586 1 XLOC_053373 NonCoding TCONS_00088586 XLOC_053373 NonCoding NonCoding - 18:14038480-14039448 - TSS65932 968 2 TCONS_00088586_2 78 0.134297520661157 1 0 0.00105415937593195 1.03806059155069e-05 9.55991849630058e-05 0 8.16062907983557e-05 7.39060835515826e-06 0 0 0 0 0 0 0 0 0 0 0 0 0.000844509640556993 0.000111437439151771 0 0 0 0 7.87327711816813e-05 7.27837545442785e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.0122089054984846 0.929564198061735 0.000986490883981589 0.984274072913148 CCACTTGTTTTGCTGCAGCCCACAAGCTAGGAGTGGTGTTTACATTTTTTAATAGCTGGAAAAAATATCAGAAGAGTTGATGATGTGAAAATATTTACCATCCAGCTCATCAGAGAAAAGTCTGCTGACCCTGAACAAGGAGACTGCACCGTGGAGGGAGGCATGCCCCTTCAGGAGGGAGGCCCCTCTCGCACAGGCCAACCCGATTCCCCTCGTGTCTTCGGAGTCTAAGGAGAATGCAGGTGTGCTGCAGGCCGTCAGAGGCAAGCCTGCAGTGAGAAGGTTACGGACTTTTGAGCCCAACCTCCAGCTGGGTCTCTTCTCCTGGCTTGGTAACGTGTGTTTTCCCAAGGCGAGAGGAGAAGGACAGGCCGGCTGACCCTGCGCTCTTCCCAGCACATCCTGGGCTGTTCTGTCCACACAAGGCTGACTCAGACCCTCCTCCCTGACCTCAATGGTTTTCATTGATTCCTGTCCTGAAAATTTCCCCAAGTTTCACCACCTTTCTCTGCTACAAATCAAAACACAGTCTGTGTGGGAGTTGGTGCCGGCTGCTCTGGGCCCCCATATTCCTGGCCCACTGGAGCCCACACCCACCTATGACAGAAGTGGGCAGAGTCCACCTGGAGAGATTTAAGAGGCTCTGCAAAGGCTTTCAGAGTAAAACCACCAACACCCACCACGGTCTGACGGATTTCCACCCAACAGGCAGACTCACAGTGCAAACCATTCCCTGTTTCTCTGAATTAATCAGACCACTCTTCAGTTCACACCCAGTAGAGGCAGCAGCCCCAGAGGAGGGAGCTGGGGACAGAGGGCTGGCGTGTGAAGGGTGAAAGGAGGCTCCGGCACTCTGCCCTGGGCACAGGGAGGCCAGGAGGGGTGCAAAGGGGAGGGGCCTTGAACAACAAGAACCACAGCTAGAGCTTTCCGGAAGGGGCGCAGATGACAGCTCAAGCTGGAGACAC TCONS_00085493 TCONS_00085494 . 3' 794 TCONS_00085493 TCONS_00085494 . 3' 1761 EMBV3_24703 GACGACCTACTTGGCTTAGGAAATAGTCCAGCCAATAGTGAGGCAGCACAGCTTTATCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01171 CATGTACTGAAGGCGATGCAGAAAGGACTGGGTGGGCTAGAGGCTTGAGAAGTCAACGCA Gene GeneID:540850|SYT7:XM_002699311:310_cdna Constitutive 0 NULL GeneID:540850 29 GENE SYT7 NULL synaptotagmin VII EMBV3_42102 CGCTCTAGCACAGCGTCTGCACGGCAGAAATACTTAGGATAGGCAAAGAGTGATTCCCTT Gene BVT0102_022823 + 0 NULL GK000019.2:62860775-63165185 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25775 GTGTCAAATTTCAACCGACAGGCAGATTCCCCCAACTCTGAGAGCCCGGAAGACAAGCAC Gene GeneID:537689|LACE1:XM_002690118:135_cdna UTR3_Alt 2 NULL GeneID:537689 9 GENE LACE1 NULL lactation elevated 1 EMBV3_29835 GAAGCGTCCTTCTATCGACGACTTTGTAAACACCCTCGTTTCCGACCTGGACCTAGACTT Gene GeneID:517531|MIPEP:XM_002691846:122_cdna Constitutive 0 NULL GeneID:517531 12 GENE MIPEP NULL mitochondrial intermediate peptidase EMBV3_06488 TCAAACTGCTCCTGGCCAGGCCTGAACCAAATGCCTGGGGCCTGATGTCTTAAAGAATAA Gene GeneID:517889|TFF3:NM_001114509:18_cdna Constitutive 0 NULL GeneID:517889 1 GENE TFF3 MGC127202 trefoil factor 3 (intestinal) EMBV3_28097 TCAGAAAGAACTAGAAACAATGCGTAAGAAGGGTTCCGTCCGAGGCACGTCGGCTGCTGA Gene GeneID:613773|PITPNB:NM_001078040:83_cdna UTR3_Alt 4 NULL GeneID:613773 17 GENE PITPNB MGC139835 phosphatidylinositol transfer protein, beta EMBV3_29428 GTTCACGAACAAGTGCAAAGGCTCTCTATGAACAAAGGAAGAATTATGCACGGGACAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18371 CAACTTGTGTTCTGCTCCTGGCTAGGGGGATTCCTGGCTATCTTTCCCCCAATCATCTTA Gene GeneID:510046|LOC510046:XM_002687431:193_cdna Constitutive 0 NULL GeneID:510046 5 GENE LOC510046 NULL similar to Olfactory receptor 6C4 EMBV3_18228 AGTGATGAAAGGGAAGAGCCTACAGACCAGAATACTCTACCCAGCAAGACTCTCATTCAG Gene BVT0102_010500 + 0 NULL GK000005.2:41699188-41827702 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166442 1 XLOC_101280 Coding TCONS_00166442 XLOC_101280 Coding Coding - 29:13855025-13855369 - TSS124420 344 1 TCONS_00166442_1 75 0.982558139534884 1 0 0 0 0 0 2.87045884882088e-06 0 0 0 0 0.00111234914754368 1.33092109775607e-05 5.19721604093362e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.41122314181103e-05 0 XM_005216780.1 KCTD3 PREDICTED: Bos taurus potassium channel tetramerization domain containing 3 (KCTD3), transcript variant X1, mRNA. 1e-45 187 76.01 0.781976744186046 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 3e-15 86.0 70.37 0.546511627906977 TCONS_00166442_1 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 3e-12 62.0 50.00 0.68 1 noncoding CCTGTCATGGAAAAGGAAACATTCAGCCATATCCAGCAAGCATACAGGGAGCCAGGCAGGAGGGACACATGGTAATCAAACTGACAGAAATCAAACACAAAGATAAATTATTAAAAGCAACAAGGGAAAAAATACAAATAATATATAAAGGAACTCCCATCAGGCTATCAGCTGATTTCTCAAAAGAAACTCTACAAGCCAGAGGGGAATGGCGTGATATATTTCTAAGTGATGAAAGGGAAGAAGCTACAACCAAGAATACTCTACCCAGCAAGACTCTCATTCAGATGTCATAGTGAAATCAAAAGCTTTCCAGACAAGCAAAAGTTAAGAGAATCCAGCAC TCONS_00163141 . 3' 850113 TCONS_00163141 . 3' 850456 EMBV3_16486 CCTCATTTCAGAGTGTAAGGTCACAGAGCCCTGAAGTACATAGATAGAGACCCTGCTTCG Gene BVV0101_015052 + 0 NULL GK000016.2:1728658-1733159 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30128 ACAGTGTTCGGCCACAACATGAAGAGCAGCAACGACTTCATCGGGAGGATCGTCATCGGC Gene GeneID:532273|SYT17:XM_002698039:262_cdna Constitutive 0 NULL GeneID:532273 25 GENE SYT17 NULL synaptotagmin XVII EMBV3_05653 CTGATGTTGACATTCATCGTGTGTGGCTTTCTTTCAGTCCGGCCGTTTCCTTTGGAGCTG Gene GeneID:514813|USP7:XM_002697958:668_cdna UTR3_Alt 3 NULL GeneID:514813 25 GENE USP7 NULL similar to ubiquitin-specific protease 7 EMBV3_23088 TCACTAATGAGGATGTGGACCTGGACCTGGGAGGTGGGGAGAGGTCAGATAAAATCTAGT Gene GeneID:513405|IMP4:NM_001075617:13_cdna Constitutive 0 NULL GeneID:513405 2 GENE IMP4 MGC139889 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) EMBV3_23239 TCTGGAATATTAAGCAGATGTGGGACACGAAGACACTGGGGTTGAGACAGCATCACTGCC Gene GeneID:614729|WDFY1:NM_001046542:178_cdna Constitutive 2 NULL GeneID:614729 2 GENE WDFY1 MGC137087 WD repeat and FYVE domain containing 1 EMBV3_24806 AGGGAAACCTGGCCTGCCACTTACTTCTCATCAGGGACCGCATGCCGATTTGTACTTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27956 CTTCGTGAGGAACGTGGCCGACGATACCAGCTCCAAATCAGATGAAAGCCAAGGAAGGGA Variant GeneID:768310|FUSIP1:NM_001078126:305_cdna 147^355 4 EMBV3_38175 GeneID:768310 2 GENE FUSIP1 MGC128430 FUS interacting protein (serine/arginine-rich) 1 EMBV3_18279 CAGGCTGGAGTCTAAAACCTCTAAAAATAGACCAGGAAGGCCCACACTTGACAGTCACAG Gene GeneID:781700|LOC781700:NM_001102526:20_cdna UTR3_Alt 2 NULL GeneID:781700 13 GENE LOC781700 MGC154974 hypothetical protein LOC781700 EMBV3_05503 AACCAAGCAACGTGTCAGTAAGCAAGCCTGCCCTAACACCCATGAGGCACCACAGTCTTG Gene GeneID:514510|DNAJC16:NM_001101091:115_cdna UTR3_Alt 2 NULL GeneID:514510 16 GENE DNAJC16 NULL DnaJ (Hsp40) homolog, subfamily C, member 16 EMBV3_39982 GGGAAGCGTAGAAACTGGTTGAATTCATCTCCTACTGAGACTTTTTCGAATACTAGATGC Gene BVV0102_043102 + 0 NULL GK000023.2:44536871-44660174 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135297 1 XLOC_081683 Coding TCONS_00135297 XLOC_081683 Coding Coding TMEM170B 23:44653506-44674529 = TSS100689 7766 2 TCONS_00135297_4 99 0.0654133402008756 2 0.630672628674722 0.000663994355536443 0.00011323151166548 0.000285697955200027 0.000220205018658689 0.000200943932517039 9.98273940288637e-05 9.48215999068121e-05 9.64362714472143e-05 0.000229554787186707 0 4.7163397503498e-06 1.38128360659022e-06 1.67884755191189e-06 4.24001719171507e-06 8.8609553358064e-06 0.00144521945426268 0.000228746511053186 0.000356997227347333 0.000153742044414481 0.000559081987022422 0.000136429116947231 0.000274646138616086 7.79663388111683e-05 0.000362665119110884 0.000366676183397371 0.00030042067268637 0.00015191488195472 0 1.18770765649232e-05 1.81078642095022e-24 XM_867185.5 TMEM170B PREDICTED: Bos taurus transmembrane protein 170B (TMEM170B), mRNA. 0.0 4635 100.00 0.330800927118208 NM_001100829.2 TMEM170B Homo sapiens transmembrane protein 170B (TMEM170B), mRNA. 0.0 1613 80.99 0.221607004893124 TCONS_00135297_4 sp|Q5T4T1|T170B_HUMAN T170B_HUMAN Transmembrane protein 170B; 3e-63 192 100.00 0.98989898989899 1 coding 0 0 0 0 -0.0504725886229302 0.675793624695036 -0.00189764382826194 0.972466351249825 CTGATGGACCCAGTTTGGATCAGTGGCCTGTCCAGATGTTCCTCCACGCAGGCCGAGTCAGGGGGATGGAGTTGGTGGAGGACAGGCAGTCTCTGCAGGAACCGTGTGCACTGATGGAGGGGCAGGTGGCCAGAAAGAAAGGGAGTGGGTGCTAGAGAGAGACCGGAGGGCATGCCCGTTGGCTGTCTGTAGCCGACTTCAGTGAAAGCAGTTGAGACCACATTGATGAGTTCTGGGTAAGGGCTAGTATATGACCTGAGACAAAGAACTTAAAAGATTCGGACAGTTCTTCAGTATACAAAGACGAGAGCCAAGAGGGAAAGGACCTGAACTTCTTAAAATTGTAAAAGACAAAAATCATTGACTCACTTCTGGAATTATTTGAATTAAGGGGTAGTTTTTTTTTTTTTAAGGTTTGGACACTTAGTGTAGACAGTTATATATCAGACAGCAATTAATTAACTTATATAATTTATTCCAGGAGATTTGCAAACAAGAGGGTGTATCAGAGAAAATAATAGAGCATAGCTGTGTCATGGGGACATTTAGAGGAAATTGGAGTGTGGCTTTGACCTGGTGAAGTCATGGAGGTTGATTTCCCCATCAAGCAGTAGTAATGATGATAATTGTTAAAATTTCGTACTACTATGTATCAAGTATTGTACTGGGCATGTTTGTATCTATGATCTCTAACCAGACCATGATCATCCAGACCATGGGTGCTCACGCTTTGTTACACTGGATTTTCCCAAGAGGTTTTCCAGCACAGTTTTCAACGCCTTGCTTTCCCTTTCAGAGATGTGGTACTGGATCTTCCTCTGGGCCCTCTTCTCCTCTCTGTTCGTCCATGGTGCTGCCGGAGTGCTGATGTTCGTGATGCTGCAGAGGCATCGGCAAGGGAGAGTCATCTCCGTCATCGCCGTCAGCATCGGATTTCTGGCTTCCGTGACTGGAGCGATGATCACTAGTGCAGCCGTGGCCGGCATTTACCGAGTGGCCGGGAAGAACATGGCCCCCTTGGAAGCCCTGGTGTGGGGCGTTGGGCAGACAGTACTGACTCTCATCATCTCCTTCTCAAGGATCCTCGCCACACTCTGAGGTTTCTGTGGGAATGTCTTTACTTCACATAAGGAAACAGACGTACAGATTCTCTGAAAACGGCATCGTTAGCGAGTGGGCGTGAGATGGTACAAGGACGTGGAAGGAGCGGGTCGAAACACAAGGCCTCGGGCCGTGTGGGAAGGTCGCCCTCTGGTGTTCAATGATTGCACTACCGCACCGCACCTTACGTGCCTCCGTCCCGGGCAAGGCGCACTGCTGCGTGAAGCTACAAGAAAAAGCACCTTGTTTAGCTGCCAATCAGGTTAACACTGGTGTTGAATCATCATTCTTAACAGTGTTGTGTTAAGTTACAGGGACGTTTTGAAGAATTGATACATGTGCCAAACTCTTTTTTTTTTTTAACATTGATCATGTGAAATTTGCAAGTGTAGCTGTAGATGAGTGCTGTGAACATATTTGACATGAATTCAGGTGATGTAGTGAGAAATTTTGTTTTGTAATGCTAAATCCTGTATGAGTGCTGAATATCAAGTCATTTATTATGAGACAAATTACCTGATTTTTAATGTTGAACGTTTCTGGGATTTAGGGCTTTCATATAAACTAGGTATTTATTGTTATTTACTTTACGTGGAAAATAATACTGAATGGAGAACTGCTAGACTCTTTCAAGGATTCAAAGTAGATCTATAGGGTGCATCCTTTTCACTCACTCAAATAACACTCTTTAATAGTTTCCCTCATGCATAAACATTCTGTTGCTATGAATTTAAAAACTTTTTGGGTCACACATATTGATTGTAGTTTGTGTGTCATGAAAATTTAATTTGAAAATTTTCTTATAAATTTTGTAAGAAAAGTCTGAAATACACATCCTATTCTTGATCCTTCTGAAGAAAGTTTCTGCCATGTATCTCATGGAGAAAACATCTTTACAACTGGTATCTCAGTGGGATTATATTACTTGTTGCATATATCTCGATTTTTGACAAAATGTAAGCAATCTTTCATCCTGGAGTATCAAATATATATAAAGAGTGGCCTAAATTAGGCTGTGAAAACAAGAAGCCTCACTTGTAGTTAAGAAACAAGTCATATAGGAAGAATAATGAACGATCTTATTTTGGCTGTGTGGTAGCATCATAATTTCTCTAAGTAAAAATTGGGGAATATAGTAAATTTAAAATTTGGCAGTTACTCTCAGCATATCAGTACAGTGTTGAACATATATTTAAGTGATTCATTTCAGTTTTTCAACTCTTGTTTCATTCTGTTACTTAAATTTACTAGCACCTACAGTGATATTTATTAGAATGAAAAGTTATTGGTATAAAACATTTTAAGAGGTTTTGGCCATATGTAATTGTATTTAAGAGTGTAAGAAGTAAGGGAAGCGTAGAAACTGGTTGAATTCATCTCCTACTGAGACTTTTTCGAATACTAGATGCAATTATACATTGTTGTTTAGTTGCTATTCATGTCTGACTCTTTGTGACCCCACATACCGTAGCCCCTCTCACACTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTAGCCACTTCCTTCTCCAGGGGATCTTCCTGACCCAGGGATTGAACACGCATCTCCTACATTGGCAGGCGGATTCTTTACCACTGAGCCACCAGAGAAGCCCATGATTGCATATATGTTAATTCAACAGAAGAGCCAATTGCAGAAAATATGAAGTTATGGACAATCCAAAAGATAATCTCCATACTCTAGCCTCACTCTTTTATAGTCTAACTTGGTAACAAGTAAGCTTCTACTAGCTCCCATTCAAATTTAAGACCTTTGTTACCCACGACACCTTTTCTCTACCAAAAAGCAGAATACATCAACAACTCGATGATGTGTTGGGGGTATTTTTCCAGTATGGAAGCCAGTTTGGGGTGGGGTAATTTAATAACACTGTGGTTTGGAAATCTGTTTTAATAGAAGCCAAGAAGCAACTATGCATTCTTAGAGATCTTTAAATCTTAAAGTGGATTATTTTTATTATGTTTAGCCTGAAATTAGTTTCACATGTTCTTTATATTCCTGATGTTTTCTTAAATTTAGGTCTAAATCTCCCAAGTCCACTTGACTTTTCCTTTTCTGTTAGATTTGAATCACTTTCTTCCTTTACTTTGCTTATTCTGTCAGTAATTTAAAGTGTTCATATTCCTGGGGAGAAATTATCAATAATGTATTGAAATTGAGATTCTACAGAAATGAATATTTATTTTAACACGTGATTAGTTTATGTTTTCAGAAAGTTATCTTGGTAAGGTAGCTGGGGCATGTGGTTCAGAATCTGAAATTAGCCAGAAAATAACCTGGACACGTTAAATGTATGGCTGCATGGACCAAAGAGATTTAAACTCCTGTTTCTGCTCTCGGATAGAAGTATAAGAAGGTGGATCGGTTTGTAGCGTGTCCTGCAACTATCTCATTATCAGGTCGCTTCATATTATGAGCTGTGCGTGTGTGCCTGCGCCTGTGCTTTTAACTTTGGGGGGAATTTTGGTTTCTTCCATTGTTCTTAGTTACTTTCATTGGGATTTTGTGCAGCTGTTACTCTTCTGATGTTGTGAAATGCAGCTGATAGTGTGAATGGATGAAATGTTTTAATAGCTGTTTCTATGAGATTTTTTTTAAAAGGTCAATGGTTTTCTTATAGAGGCAAAGAAAACATTTAATGATATATGTCTATACACATATATGTCATTATACACACACACACACACACACACACATATATATGTAAAGCTGCTGTATATGAATAGAATCTAATTGAAAAGCTTTTGTTCAGTGAACACTTTGATGTAATGGAGAATTTAATGTATTTGCTCAGTTGAATGATCTTTTAAACAGATTTGAGGAAGTTTGAGATTTTTGAATTGGGGGAAATTTTTCTTGGTTTCTTAGTGCTAGATATCCTTGTTTGTGATATAACAAAAGCCCATATTGATATATTTGGGTTATTCTTAAAATTTGTATGTGATTTAGCAGTAAACTTTTTTGTGTGTGTGATAAATGCAAGAGGGAAGGGGGCTGAGAGCCTCGGCAGTTTATAGATCTTTATCTTAAGAAATGCTAATAAAATATGGCTGACAGTGAAATCAGTTCCTCGAGAAAGAGACTCCTGTTTGCCCAAACTAATCATTAATTACTTAACACACTGGTTAGAAATGTCCATAGATCAGAGTTAGGGGGTCTCATCTGAGCTACAAGTGATGCTTAAAATTTAAAATGCTTTAAATGAAGAAGGTGCCAGCAGTCCCCCCTGGACAGTCCCACTGGTTGTCTAGAATAACGTGAGTCCTAAACTCGGGCCGTACTCCGTGTTCACACGAGTTACTCACTCTTCCTTTAGGTCTGTGTGTTTACCGAGCAGGTTCACAGTTTGTAACCCAGTGTGCTTTCTTGGTATTTGCAGAATGTGTTTCCACCATCCTCCCAAAATGTGAAGATTTTGTTTGTACTTTAAGTGAGAAATAAAGAAATGAGCTACCCCATATATCCTATTTGTGGTATAAGGAACAAGAACAAGTTTAAAAAAATGTTCTTGGAAAACATGTTTAGAGAACCTGTAATAAAGATCTGGAGAATGGAGCTGCCAAGTCAATGTGCCCAGGCTGGCACTTACATACCAACTAATTCAATTTTGTAAGCATTTTTGGTGGATCTAATATATACAAAGTGCTGAGCCTAGTATTTTCTGTAGTAAGCACAGGATACCTCCAAATGGGATCCCTGCGCTTGAGTCCACCAAGAGCTACTGAGACGATTTAAATCCTAAAACAGTTGGGAGAACATCCTGCTTCTAGTTGAGAGTTTAAGTCCTTCTCCCCCAGCCCGCCCCCTCCCCCAGTTCTGACTTTTCTCATTCACCAAGTGGAATTTTAGAAACTGAGACCCCACTGCTGTGGCACAGCAACGAGAACACTGGAACCACGCCGGTGACACAGGCTTGAATCCAGGACCTCTCACTTGCTGACCGTTTGTTTACGGTGGAAGTGCGTAGTTTGCCCTCCGTATCTGTGGTTCCACATTCAGGGATTCAGCCAACCTTGGATGGAAATATTTGGAAAGAAGATCCAGAAAGCTCCAAAAAGCAAAATGCCCCACACAGAACATTTTCATAGTGTTTACACAGCATTTACATCGTGTGAGGTAGTATAAGTAATCAAGGGGTGACTTAAAGTTATATAGGAGGGTGTGTGTGGGTTAAATGCAAGGGCTGCACCGTTTTCCATAAGGACCTTGAGCATCCTCAAAGTTTGGTACCCACGGGGGTCCTGGAATCAGTCCCCTGTAGATACTAAGAAAATACTCAGTATTTAATAGGAAATGATCAATAGATAGTCATTTTAATTTTTTAAATTAAACTTTGCAATACCAAGTTAATACATTGTTTTGTAAGATTCATCTATTGTTTTTCATTTCCACATTTCCCCTACATGTATTTTAAGAAGGAAACTTTAAAAAAAATTCTCTTATGTTGCTTTCTTTACTTACTTTCAACCTCTTTTTTTTTTTAAATCAGCAGATATTTTTCCAAGAGTGCTTCTGGAGGCTGGTGGTGATAGAAATGGCCAGGGCAGGCAGGAATCAGTATCAGGCTGTGCGTATTACTAGTTAAAAAACAGGAAAGGTGAGAAGTGGTCAGGACTTACCCCTTATTTTCTCTGGCTTGCGTAATATCCATTGAATCTCCACTGCATGCAGCTTACTCTGCTTGTTCTAGGCGTGGGGAGGTTACCCCTCGCCCATGCATCCACCTCTCTCCTGCCACCCCAGCCTGCAGGAGAACATAACTCGGCAGTGCTGTCTGTCATGTCCCTCCTCCCCTGGAGCAAACGTGCTTCAGCCCTACTTGTTGTTTGTTTGTTTTTAACTTAAAAGGTAATACTTTTGTTTTAAATTTATGTCCATTTTATAATTCAAGAGATAATAAGATGTTGGGGACTTTCTGAAATATTCTCAAGCCACTTGACTCTTGTAACAAACGTGTCTCTCCGAAAGTCTTAGAATTCTTCAAAGAGTCGCTATTTGTTTTTAAGATGTGAAGAATGGAAAGTTACTGAAAAAATTGTAGTGACCTAGATTGCAGAGAAGTTTGGCAACACTTGGGTAACTGGGTAAACGGTTTCAAGGCTGAGAATGTCTGTGGTTGAAATTGACCAGCAATTTCCCTTTTCCTGTCCTTTTTATAACATTGCGGAGGAAGACTGCAGCATAAAAAGGACATTATTTGATTAAAAAATGATAAAAATGTTCAAACATGTAGTAGTATTTATAGCAGGGGGAAAGTTTAAAGATGGGAAGAAAGGTTGGAAGGGTAATGCACAAAGACAGACGCATTTGACGAAATGCCCTGCAGTATGTGAGCGCAGGTTCCCCTTCTGGTAAGACTACAGATGCCACCGCGTGAGTATGTTTACTGCATGTTTGCAAAACGCATTTCTTTATATGTGAGACTAAATGCACCACAGAGCATGAGATCGTTCTCCGGTTTCGTGCGTGTGGTGGTTGGTTTGCCCCACTCCCTCAGAGACCTCTGTTCAGGGTAGGCAACACAGTGTTTTTGAGGAGGTGGCTGAAGCTGTTGTCTAAAAATTTATCTATTAATTTGTTTAGAGAAAGTAACGCTTAATATATACAGTATTTTCTGTAAATGTGGAGATAAACCGGTTAATACATTATTAGATTAGTGGAAACACCCAAATTTCTCAGTGTGCTGAGCTGTAACCATCTCCTGCCCTGAGCACAGGGGCCTTGTTTTCACATTCTTTATGTTCATTGCATGTATGTTGAGGTTTCATAATAACCCTGTCTTGATTTTTGAGAACTAATTTAGCAGTTTTTTTTTTTTTTTTTTTAATATTCCTCCCTCTTCCATACACATATCATACGGGGTAGTTTAAACATATGTACAGTTTGTTGATAGAAGTGCTGGTTTAGAAGAGAATGTTCTCAACACCTTACAGTTATGCAGCTGCAATCTTGCTGAAAATTAAATACTGTAAACAAATCAAGAGAGCATGGACCTCCTATGTGGTTTTTTTTTTTTAGGATGGTGTCCTGTACCAATATATATCTCCGCTCAGAGGTGATGTGCCTGTCCTCTTTTGGGGACTGCGTTTAAGTATGTAACTGAAACTGGGAAGCAGTGTAACATAAATACATAGGAAGAGGAGCTATCATGTATAATCACCATAACTGTAACACTCTTTCTTCTGAACATATTGCATATTGGTAATTTCTAAAGATCATCCCTTTTTTATAGCCCTGTATAAATGAATGGTAACTTGATAGTACTGTTGGTGGTGAGAAGTTTCCTTTGTCTTTAACGTATTTATACGTCCTCACTAAGTATCTTTGGGTAGGGACATTTTTAAGTTTTCTCCATAGAAGGCAAAAGAGAGGCACCTGTTTGAATTAAAAATGATTTACTTTCAATACTGGATGAGATGATAGTCTGATTATTGACGCTTTCTTAGTATTTGTGATATCACATGCATTTACACTAGAGGAATTTTTAAAGTTCTGGCTGTCTCCCAAACACACACATACACACACACGAGCTCTGCATATTTAGATGAACAGTATACAATTCCACAGTATTTTTCATTTTAGTTAATTTAATTAACTAGGTTAAAATTCATAGGATTCTACCATGAAGTAT EMBV3_04580 CATAATGCTCTTGAAAAGCAGACTTTTAGTCTCTTGGACTCTTCAAACCAAGTCCTTGAG Gene GeneID:504972|GIN1:NM_001024473:5_cdna Constitutive 0 NULL GeneID:504972 7 GENE GIN1 FLJ20125 gypsy retrotransposon integrase 1 EMBV3_00539 ATTAATAAAGCTGTGGTATGCACCTGACATATCGCTCCCCGCCCTTCAGCCCCTAAAGCC Gene GeneID:617935|CUL4A:XM_002692015:17_cdna UTR3_Alt 2 NULL GeneID:617935 12 GENE CUL4A NULL cullin 4A EMBV3_39943 AAAGATGAAAAGCCTAAGAGACCTGAAGATGAGCGTGGCAGAGAATACCGGGAGAGGGAG Gene GeneID:780995|LOC780995:XR_084167:383_cdna Constitutive 0 NULL GeneID:780995 23 PSEUDO LOC780995 NULL hypothetical LOC780995 EMBV3_37685 AAACCAAAAAGAAGCTATTGGAACACCACGGACTAGGAACACGGTGGACTCCTCTCCAGC Gene BVT0102_407378 + 0 NULL GK000010.2:75877397-75890927 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15940 TACTCACACTGGGAAAGATTGAAGGCAGAAGAAGAGGTCAGCAGAGGACGAGATGGTTTG Gene GeneID:286876|CFDP2:NM_174800:67_cdna UTR3_Alt 2 NULL GeneID:286876 18 GENE CFDP2 MGC128687 bcnt p97 craniofacial development protein 2 EMBV3_21785 TCAGGGTATTGGGGAAGAGGTGGTCAAGAAAGTCCGTGCTGTGTTTGAGTGGCATATCAC Gene GeneID:493643|HSD17B4:NM_001007809:8_cdna Constitutive 0 NULL GeneID:493643 7 GENE HSD17B4 MGC139512 hydroxysteroid (17-beta) dehydrogenase 4 EMBV3_05646 GCAGCTTTCTTTTCTAGAGACAAATATTGATACCAAACTTTATTTCAGTATACTTAGGTG Gene GeneID:510506|CPS1:XM_002685554:169_cdna Constitutive 2 NULL GeneID:510506 2 GENE CPS1 NULL carbamoyl-phosphate synthetase 1, mitochondrial EMBV3_21714 ACTGCGGCCGCCCGGCTATTCGGAGCTAAGGGCATCCGTTTTAGAGGCTACAGCATCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03307 AAACCAAATCAATAAAAAACACAGCTTCCCAACACCATGGCTTGCTGTGCTCCCCTCTGC Gene GeneID:768045|KRTAP3-3:NM_001077103:237_cdna Constitutive 0 NULL GeneID:768045 19 GENE KRTAP3-3 MGC139935 keratin associated protein 3-3 EMBV3_42031 CAAATGTATTGGCAGTCACGTTAAGAGAAGTACAAGGGGGAGGGCATGAGGTGGTACTGG Gene GeneID:540004|NUP98:XM_002693428:47_cdna Constitutive 0 NULL GeneID:540004 15 GENE NUP98 NULL nucleoporin 98kDa EMBV3_29394 CAGTTTGAGAAGGTCACCGAGGAGCCCATGAAAGAAACCAAAGGAATGATCTCATTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39396 CCAACAATTCCTTTGCTCTTACTGATCCTGGTTGCTTTTGGAACCTGCTGTTTCCAGATG Gene GeneID:613942|CHODL:NM_001101228:10_cdna UTR3_Alt 2 NULL GeneID:613942 1 GENE CHODL NULL chondrolectin EMBV3_37175 TCCAGAAAGAATGAAGAGACGGAGCCAAAGAGAAAAAATGCCGAGTTGTGGATGTGACTG Gene BVV0102_190267 + 0 NULL GK000001.2:141531673-141658666 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09344 TAGCTCTTTCCACGCCACAAGTCTCACTACACTGACCTTCCAATTGCCATACTGTGGGTC Gene GeneID:616631|LOC616631:XM_002699132:218_cdna Constitutive 0 NULL GeneID:616631 29 GENE LOC616631 NULL similar to olfactory receptor EMBV3_12535 CAAAATCAGTGGACTCCTGTGGGCTGGATTAGCGATGCTGTCTGTTCAGGGCGGAGCAAT Gene GeneID:504728|CCDC109B:NM_001075171:26_cdna Constitutive 0 NULL GeneID:504728 6 GENE CCDC109B MGC128209 coiled-coil domain containing 109B EMBV3_29487 TCTGCTCAGTGTTATGTGGCAGAGTGGATGGCAGGGGATTTGGGGGAGAGTGGATACATT Gene BVT0102_335227 + 0 NULL GK000014.2:24772997-24872637 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38974 AGTTTTGACCTCACCGATTGCTGGGAGCGACCCTCCAACAGTTCTCTAAGCCATGAGGAA Gene GeneID:787577|LOC787577:XR_084011:428_cdna Constitutive 0 NULL GeneID:787577 21 PSEUDO LOC787577 NULL similar to Frizzled-3 precursor (Fz-3) (hFz3) EMBV3_20741 TCATGAACCTCCGGCTCTGTGGATTGCTGGTTCTGATATCCTGGGTGCTGATTGCCTTGT Gene GeneID:100299615|LOC100299615:XM_002707855:460_cdna Constitutive 0 NULL GeneID:100299615 7 GENE LOC100299615 NULL hypothetical LOC100299615 EMBV3_38961 CAGATAGTGAAGTGGAGATTGTGGGGGTTCAGGAACATGCAAGGTGTGTTCATCCTCGAG Gene GeneID:615069|LOC615069:NM_001105439:179_cdna Constitutive 0 NULL GeneID:615069 24 GENE LOC615069 MGC148398 hypothetical protein LOC615069 EMBV3_15849 CAGGTGGTGCCTGGTGGGGGTCACAGCAAGGTCCTAAGGAGTCACCACTTCCCCAGAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27576 TGCTAAAGAACTTGGTATCTCTGTTAAAGTACAAGATTAGAACAGTTGCCAGAACACATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30969 AGAAGGGTAATGGCCAATGTAAATGAGATGCCACGGAATTTAGGGCCCAGTGCTTGTTGC Gene BVV0102_195887 + 1 EMBV3_22096 GK000024.2:7304801-7401039 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03063 CGAGGCACCTTCTGCTCCTTCGACACTCCAGACGAATCCGTGCGGAATAAACTCATTTCA Gene GeneID:506219|ABAT:NM_001081581:75_cdna UTR3_Alt 2 NULL GeneID:506219 25 GENE ABAT GABA-AT GABA-T L-AIBAT MGC137464 4-aminobutyrate aminotransferase EMBV3_12568 AAAACTCACGAAGGATGAGAAGCCGCCAGAGGAACCAGGAGAAGCCAGGAAACCACAGGA Gene GeneID:767871|LOC767871:XM_002696080:27_cdna Constitutive 0 NULL GeneID:767871 19 GENE LOC767871 NULL hypothetical protein LOC767871 EMBV3_28654 TTTAAAGATCTCAGTCGAGGTGGGAGGAGGCAAAGAACAAGAGGTACATGTGTGGCCGAC Gene BVT0101_009583 + 0 NULL GK000009.2:70126984-70181053 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237639 1 XLOC_144765 Coding TCONS_00237639 XLOC_144765 Coding Coding EPB41L2 9:69915212-70130442 j TSS177609 7541 1 TCONS_00237639_12 984 0.147062723776687 21 0.965060470475633 0.000169847835172726 0.000301607218036416 0.000185359633552338 7.60211130058317e-05 0.00035005944499472 0.000149891574471249 9.0992384362244e-05 3.72019802505572e-05 0.000234275146555477 8.935034240872e-06 2.26254678050118e-154 2.5735297598767e-07 9.4817484852555e-06 0.000238640466964039 0.000450944406672958 6.86231406406261e-177 0 4.02950520795793e-68 8.67830893967847e-05 0.000564647796542792 0.000255690941566753 1.93858640980785e-154 1.23926156079484e-178 1.76322070445487e-74 0.000156770819253278 0.000375589504780307 0.000177652624546049 2.91440559417683e-06 8.43041456976057e-46 2.97616922920263e-52 XM_002684253.3 EPB41L2 PREDICTED: Bos taurus erythrocyte membrane protein band 4.1-like 2 (EPB41L2), mRNA. 0.0 7625 98.16 0.575387879591566 NM_001431.3 EPB41L2 Homo sapiens erythrocyte membrane protein band 4.1-like 2 (EPB41L2), transcript variant 1, mRNA. 0.0 5220 86.09 0.584140034478186 TCONS_00237639_12 sp|O43491|E41L2_HUMAN E41L2_HUMAN Band 4.1-like protein 2; 0.0 1633 86.03 0.998983739837398 0 coding 0 0 0 0 0.0412972030556411 0.688468811795236 0.0132405490304145 0.784044456786771 GAGATGAAGTCTGTGAAGAAGAGATGAAGTCTATGAAAGAAGTCTTCTCAAATTGGGGGTGGCTCTCTGACTTGCTTTGATCAACAGAATGGGACATATGTGTGGCTGTAGGACTTCTGGGTCTAGGCCTGCAAGGCCTTGCAGTTTTTGCTTCTACCTTCTCAGAAGCCAGGTGTCATGTAAGGAAGCCTGGGTCATCCAGCTAAGAGGCTGCATGGAGAGAGAGAGGCTCTGGAAGATGAGAGACAATGTAAAAGAGAAATTAAGCTCCTCATGTGACAGGCAGCACCAACTGCCAGACCTGGGGGTGAGGCCATCTTGGATCCTTCATTCATGGATGAGCCTCCCAAGCTGACACCACATGGAGCAGAGATGAGCCATCTTGCTGAGCCCTGCTTGAATGGCAGCCCCAAAGAATCAAAAGCAATAAAATGGTTGTCATTAAAATTTGGAGTTATGGAGTCACAGATAGATGAAACTGCTCCAGTGAGTGGCCAAGTGATAGAGTGACTCCTCTTGGCATTTGCATGGTGTCCTTGTAGCTTCTGGAAGTGGAACTGGGATGCATGCATTCACAGGGAAGCCTGAGATTGTCTCCATCAGACCGCATGCTAGGGCAGTGCCGGGTCTTCTTGCCTGTGCATCATGGAAAGAAGGGCAGGTTTCAAATCCAGAGTCACCCAGATACTTCCACCTGGTTGGGCTTGGTACCCAGAAGGCAAAAGATAAAAGAATGAATCACCAGCATAGTGAGATCAAGATTTCTCAGGAGCATGCCTGTGTGATGTGCAGGGCTTCCCTGGTGGCCCAGTGGTAAAGAATCTGTCAATGCAGGAGACACGGGTTAGATCCCCGGTCTGGGAAGATCCCTTATGCCACAGATCAACTGTGTGCCACAGCTCTTGAGCCTGTGCTCTGGCTCTGCGGCTAATGAGCCCATGTGCTGCAACTACGGAAGCCCACATGCCCTTGTGCTCTGCAACAAGAGAAGCCACCGTAATGAGAAGCCTGCACACTGCAATGAAGAATAGCCACTACTCACTGCAACTACAGAAAAACCTGTGCAGCACCGAAGGCCCAGAATAGCCCAAAATAAACAAATTAAATTATTTTTTTAAAAAGTGGTATACAGAAGTGATTTGCAGACTTTAACAGATGATATAGCAGGGACATAATTTCCTCTGATAAGGACATTATGTTTTATACATTATGCCTACATTTAATTTATTACATTGCATTAACATTTTAAAAGGGTTTCATCACAGGTAGATTAAGGTTCTATGGGTCCTAAATCTTATATAATTTTAGGGATTCTTTAAAAGAATAAAACGACACATGTGAAGTTAGTTTCAAGGTCTGCATAGTTTCAAGACCTGTGTAGTTTCAAGTCCTCATTTCATTGTAAATCTGCCTGAAAGTTTATAATAGTATTGTCTCATAATATTCCCTGGTCTTCTTTACCAGAACTGCTTTCTAGTCAGACTTCCTCTCTGTGGTAGTTAACATACCCTATTAAGTTTTACTCGAGTACTTAGCATAGGGGGCATTAAGTAAGTTAACTCGTGTGGGACAGAGAACAATCCCTGGCATACAAAGCAAGCAATAAATGTTAGATTTTATTATTTTTATTATTCACTGGCAAGACCTTAGCAAGTAACTTATCTTCCTGACTCTTACTTTTTTTCTTTGATGTAATGAGGATAACACTTGCCCTGCCTTTTTCATAAACCTCCTGTGAGGATCAAAAGATAAAATGTTAATATGCTTTGTTAACTGAAAATATCATACACGTGAAGGTATTGTAACTGGTGTTTCATTTGACATTGGAATTTTAGAAAAGACTGTTTAGGAAAGAAAAGACTTGACTTTGGCCGAGGTGGAGTCTTTAAAGATCTCAGTCGAGGTGGGAGGAGGCAAAGAACAAGAGGTACATGTGTGGCCGACGCTGGAGGCAATGACCAGGACAAGCCCCACCGACGTGCCAACTTTCAGAGAAGAAAGGAGTAGAATCTGAGAGAAAGCGATCTAATTATTCAAAAGAACCGGAAGAAATCGTCTGTGTGTCTTTCCACAACTGGCCTGAACCTCGGGTTTCTTTTTTTCCCCCGCCACATTCTGCTCTGCAGTCCAGGCTCCTAGGCCCCTGCCTGGAGATCTACCCACACTTTGGGTTCAGTATAAAAGCCCCTCTTCCTGGAGGCTTCCCCAATCCCTCCCGTGCCTCCCACAGGAGGAATAAACGGTTCCCTTTCCCTGTTCTCTCTGTGAAAGCATTTCTTCCACTCTAGACAGAGAAGAATCTAGTTTTCCTTATTTTTGTTTCACCAGGGCCTAGCTTGGGGTCTGCTCCCGAATAGGTGCTCAAGAAAGGTTTAGTCAGTGGATTCACTTTTAAGAAATAACTTTTGGAAGTTGATAAAAGGGCATTTAATATCTGGATGCGCGGGTAAGAGCGGCTTGAACACAGGCATCAGCAGTCATTATCTAGGGTAGCTCCCAGGGCGAGACGCGTCCTTTCCGCGCTGGGTACCCGGCGACCGCGAGCCGCTAATCCCGCTGAAAGAGTCGGTCGGACTAGCGGGGAAGGGGGCGGGGCGTGGCCTGGCCGTAGGGGGCGTGTCGTGGCCCGCGGGGTTTCCGCACCGGGGGCGCGTCCGGCGGGGATGCGGGAGGAGCTTCCGCCGCGAGGGGGCGGGGCTGGGGCGCTAGTCCTCTGACGGCCCCAGCCAGGGAATTTCAATTTGAAACCTAGCGGAGGGAGGAGGCGGACGCGGCGGGCCGGCGACTGGGCTGAAGCGGGACTGGTCCCGGCGGCGAGCGAGCTCCTGAGTGCGGCGTCCGGAATAAGCTGTGACCATGACTACTGAAGTGGGCTCCGCATCTGAAGTGAAGAAGGAATCTGACCAGTTAGGAGCAGATGCAACCAAGGAGAAACCGAAAGAAGTAGCAGAAAATCAGCAGAATCAGACATCTGATCCAGAGGAGGAAAAAGGTTCCCAATCATCTCCTCCAGCTGAAAGCCAAAGTAGCCCACGCCGCCAGAAGAAAGAGAAAGATCCGTCTGAGAGCCGGGGGATTTCTCGATTCATACCCCCTTGGCTTAAGAAACAAAAGTCCTATACCTTAGTAGCGGCCAAAGATGGAGGAGATAAAAAAGAGCCTGCCCAACCTGTTGTGGGAGAACAGGTTTTAGACAAGGAGGAATCTCTTCCTGAAGAAGAAAGGCGGGCCAAGGGTGATGCTGAAGAAACAGCTCAGAGAAAACAACAGGAGATTAAGGTTGACGTCAAGGAAGAGAAACCTCTGCTTGTTGAAGAAGTAAGTAAGGAGAGAGAAGAAGAGAAGGTGAAGGAAATACAGGAAGCAGAATTTATGGATGAAGCAGCAAAAAGGGAGACGAAGGAAGTGCAGACCAATGAGCTAAGAGCAGAGAAGGCCTCTCTGAAAGCTCCCAAGAAGACCAAAACTGTCCAGTGTAAAGTGACGCTCCTGGATGGCTCTGAGTACAGCTGCGACCTGGAGAAACGTGCAAAGGGGCAAGTATTATTTGACAAAGTGTGTGAACATCTCAATCTCTTGGAAAAGGACTACTTTGGACTTGTGTTTCAGGAGAACCCTGAGCAGAAAAACTGGCTAGATCCTGCAAAAGAAATAAAGAGACAGCTGCGAAATCTTCCTTGGCTGTTCAGCTTTAATGTGAAGTTTTATCCTCCTGATCCTTCTCAATTGACTGAAGATATCACCAGATACTTTTTGTGCCTTCAGCTCCGGCAGGACATTGCCTCAGGTCGCCTGCCCTGCTCTTTTGTGACTCACGCCCTCCTGGGATCTTATACACTGCAGGCTGAACTTGGGGACTATGACCCAGAAGAGCATGCCAGTCATGACCTCAGCGACTTCCAGTTTGCCCCCACCCAGACAAAAGAGCTGGAAGAGAAGGTGGCAGAGCTGCATAAGACCCACAGGGGCTTATCTCCAGCACAAGCTGATTCTCAGTTCCTAGAAAATGCCAAGAGGCTTTCCATGTATGGCGTTGACCTGCACCATGCCAAGGACTCAGAAGGCGTGGACATCAAGCTGGGTGTATGTGCTAATGGACTCCTCATCTACAAAGACAGGCTGAGAATCAATCGTTTTGCTTGGCCGAAAATCCTGAAAATCTCCTATAAGCGCAGTAACTTCTACATTAAAGTTAGGCCAGCAGAGCTGGAACAGTTCGAGAGCACCATTGGCTTTAAGCTGCCAAACCATCGGGCAGCAAAAAGGCTATGGAAGGTGTGTGTGGAACATCATACTTTCTACAGGCTTGTGTCTCCAGAGCAGCCACCAAAGGCCAAGTTCTTGACCTTAGGGTCCAAATTCCGCTACAGTGGCCGTACACAGGCGCAGACCCGCCAGGCCAGCAGCCTGATTGACCGGCCGGCGCCACACTTCGAACGCACTTCTAGTAAACGGGTCTCCAGGAGTCTAGATGGAGCTCCGATTGATGCTGTGGACCAAAGTCTTATGAAGGATTTTCCTGGCCCTGCTGGGGAGGTTTCAGCACCAGGCCCTGGAGTTGTAAGCACTGCCGTGGTACAAGATGGTGATGGCAGAAGGGACCTGAGAAGCCCAGCTAAAGTCCCGCATATGCCGCTCATTGAAGGAAAGGCGAAGATGGAAGAGGACGAAACACAGCTGGAGGAGGACCTGGATAAGGCCCAGGAGGAAATACTGAAACACCAGGCTAGCATTAGTGAACTCAAGCGCAATTTTATGGAATCCACACCTGAACCACGCCCTAATGAATGGGAAAAACGACGTATCACACCTCTGTCCCTACAGACACAAGGGAGTTCACTTGAGACTCTGAATGTAGTGGAGGAGAAGAAGCAGGCAGAGGTTGGGAAAGACGAAAGAGTAATCCCCGAAGAAATGAACGGTAAAGAGCTGTCCCCTGGGCGTGGTCCTGGGGAGATGCGGAAGGTGGAGCCAGGGACGCAGAAAGACTCCACCTCCCTGTCTTCTGAGAGCAGCAGCAGCAGCAGCGAGAGCGAGGAGGAGGAGGACGTGGGGGAGTACCGGCCCCACCACCGGGTGACTGAGGGCACCATCAGGGAGGAGCAGGAGGAGGACGAAGAGGAGGTGGAGGAGGCACCCGGCCAAGCAGCCAAGGTAGTAGACAGGGAGGACCCAGTGCCAGCAGCCAGCCCAGTCACACACGCAGGGGCCAGTGTCGGCCCAGTAGAAACAGTGCCCCAGGAAAAGGTAGTGGCCCCCCAGATCCCTGCTGAGAAGAGTGTAAACGAAGGCGCTGTTAAGCAAGACACCGGCGAAGAAACAGAGGAGGAGCCGCAGAAGGTTAACGGAGAGGTGGCTCATGTTGACACTGATGTTTTGCCACAGATTATTTGTTGTTCAGAGCCACCAGTGGTAAAAACAGAGATGGTAACAATTTCTGATGCCTCACAAAGGACAGAAATCTCCACCAAGGAAGTCCCTATTGTCCAAACGGAGACCAAAACCATCACATATGAGTCTCCACAGATTGATGGCGGGGCTGGTGGTGACTCAGGCACGTTACTGACCGCACAGACCATCACATCTGAGTCCGTGTCGACAACAACAACCACACACATCACCAAGACTGTAAAAGGTGGAATATCTGAAACAAGAATTGAGAAACGCATCGTGATCACAGGAGATGCAGATATTGATCATGACCAGGCGCTGGCCCAGGCCATCAGGGAAGCCAGGGAGCAGCACCCCGACATGTCGGTCACGAGGGTGGTGGTGCACAAAGAAACCGAGTTGGAGGAGGGGGAAGAGTAAGAAATTCATTTTATAGACAACATTCAACTTTGTGAACCTGAAGAATTTTGACCATTCCAAGTCTTAATGCCACACCACTGCTCCAGCGAATTTATACTACGACTGGTTACAATGGCCAGAAGCCTGAAGAATTAAAATGCCAACACCAAACCTTACCTTAACAGCTCTGGTCTATACCATTCCCTTGCATTTTAATATATTGTTTTGTTTTATAACCACTTCTAAATATTATTTCTTTCCTTTTTTTTTTTTTTTTCAGTTAGAGAGTTTTGTTTTTTGTTTCCTGTTTACTTTGTGTACAACTACCTGCTTTTTGTGACTCATTTTGATCAAATGATAGTGAACAAAGCCAGCCACAGCTGGTAGGTGCTGTTCACTGGAACAGGTGCTGTTGTGCGGAAAGGAGACTCTGTGACTAATTTTGATAGTGGCTTTCCTTCTTCCGGATGCTTCCCATTGGGTTCTTAGAAGTCAATATTTACAGAGTTTTCAGTTTGCGGTAAATACACTGTATGAGAAAACGTTAATGCAGATTTAAAAGTGTTTCTTACATTATGAAAATTTTCTAATGTTTTGAAAATTTCACTGGGGCTATTTTTTGATGATGAACCCTTTTGACTTTCCAGTCCTGTGACTTTTTACTTTGGAGCAGAAAGTCCAGGAATCTGCAGACTGGAGAACTACGATGAAGTTCACTGACCACGCACTGTGTTCAGAGACCCTGTCGCACCACAGTGCCGATCCTCCTCAGACACGGGCTCTTCGGCAGCATTCCAGAAACAGGAGGGGGGAGAGAGTGATTTCTTCCCTCCTACTAAAATATTCAGGCAGCTTAAAAACCTTAGTGCTTTCTTTCTTAACATGTCCAAATTTCCATACTTTCTATTATTTGAACACTTGTGTAGAACACTTGGCTTTGTATTAAACCCCCTTGTCTCCATGTAAAAACTGACCTTTTGTTTATCAAGCAGGTGTTATCTCTTTCAGATAGCGTGATGATTCACAGGTGTGAGGATGCTGGGATGGAGGAGTAGGGCCATGGTGGGGGTTTTTTTTGACAGTTGTAAGAAAGTTACACCAGTAAAGCCGATGCCAGAGACCTGATAGGGACGTATTAACTGTATTGAACATTCTTTCCTTTGCTTTGCCCCCATGTATAGTTATGATGCCAGATTAGATTTCTAGAAGCTTCAAGTTGTATTAAATGATATTTTGCTTTCTGTAATACTGTTATAAAATAAAGTTTGTTTATTCTCTAAACTTATCACTTCTCTTTTTATGAAGGTTTAAAAAAATAAGCTCGAGTCCTCCTGTCAGTCAGAGGTTCTAGTATTTTGTGGGATGTAGCATTTTTTAAATCTGTTATTCAGATATTTTATAATTTCATGCTGCTGCCAGCTTCACCAATTTCAAATGGCTAAAACAATGTCAAATGTTTGTAAATCTACTCTTTAGAATGCCCATTCCTTCTGCCTGGTTACATAATCCACCCCCAGCTTGTACAAGTTCTCCAAGGCATATTTTTGCTTGTTTTCTTTGTGTATTTTTTGTTTTGTTTCAGGAAATGTTTTAGCTGCACCGTCTAAAATCTGGTCCTCTGCTTCAGTTTTGCTTAACAGTCCACTGACCCTTAATGCATCAGGCAGAACGGGCTCCGCCAAGGGCTGCACCTGTGTCTGAGCAGGATGGTTCACTGTGAAGCTTTTGCCCAGACTCATTTTCTTTCAAAT EMBV3_12283 GGCTATCTGTTGACTAATCTCTGCTTCAAACCTCGGCATCTTGGCAGTTTGGCTTGCTGC Gene BVV0102_259549 + 0 NULL GK000004.2:84628688-84662875 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22172 TCAGGGGCTACCTGATCCACTTAATACTGCAAGACCCTCTTCCCACAGACCCTTCTGATT Gene BVV0102_133845 + 1 EMBV3_02201 GK000030.2:56020524-56116155 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251167 1 XLOC_154110 NonCoding TCONS_00251167 XLOC_154110 NonCoding NonCoding - X:56645829-56646492 - TSS188388 663 1 TCONS_00251167_1 45 0.423831070889894 1 0 0 0 0 0 0 0 0 0 0 0 4.14331116975743e-06 0 0 0 0 0 0 0 0 0 0 0.00101852367629617 8.30231505982688e-05 0 0 0 0 0 0 0 0 noncoding GAATTCCTTTCATCACTGTGTCACAAGAGTGCCGTGATCCTTCTTCCCTATACCTAGGATGATCAGGATTTTCACTGCAACATAAACACAGGTAACAGAGTGGCACAACAGAAGACTGCTGGGCCCCCAAGCCAGAGAGGCAGAGAGGAGTGGACTAAAACCATCTTCTGCTATGGTGCTGCCACTTTGGATAGCATGGGAACCTTCTTCTTTTTTTTTTTTTTGTCTTCTCTGTCTGTACAGATTGCCTCCGAATATTTTAGATTTTGAGCACTGCAAATTTACAGCTTTGGATTTTATCTCCATTTAAGCATGAGTAGTCCAGACTTTCTGGGTGGTTATGGGGAAAGGTTCTGAGACCCAGTGACTCACCTCTTGGGTAGCCCAGAAAAGGAAGACATTGCAGGACAATGTAGGATACGTGGGGGTTGCATTCTGGAACAAAGTAAATCAGAAGGGTCTGTGGGAAGAGGGTTTTGCAGTATTAAGTGGCTGAGATAGCCCCTGATTCCTGAGCAAGATGTGATTGGTTTCTCTGAATAATTCTGCTGGCTGACAAGGAAACACTATTCAGGAGGAATATGCAGGAATGCATCTGGTGCATTCAATAAGGAGAGTCTGAAGAGGACACTATCTGGTGGAGCAGAGCGAGGAAAGAAACTT TCONS_00247031 TCONS_00247032 . 3' 149765 TCONS_00247031 TCONS_00247032 . 3' 150427 EMBV3_40097 AATGATTGCAAGTGACACGAGTGGAGATTACCGAAAGCTTCTTCTGGCCATTGTGGGCCA Gene GeneID:533360|ANXA7:NM_001075991:359_cdna Constitutive 0 NULL GeneID:533360 28 GENE ANXA7 MGC139263 annexin A7 EMBV3_11391 TGGTTGAATGACCCGACTGAAATGATCCTGCAAAGTCTAGCTTCCGGCTGTGCCAGTCTT Gene BVV0102_339113 + 0 NULL GK000027.2:42064868-42203435 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158639 1 XLOC_097091 NonCoding TCONS_00158639 XLOC_097091 NonCoding NonCoding - 27:42172247-42172849 - TSS118964 602 1 TCONS_00158639_2 61 1 0 0 0 0 0 0 2.37678134214633e-05 0 0 0 0 0.000129289478067732 0 0 0 0 0 0 0 0 0 0 0 0 5.5696589730005e-05 0 0 0 0 0 9.98712309277435e-06 0 noncoding 0 0 0 0 -0.0204757830910104 0.858506257176008 0.0537001591706352 0.324724856200119 TCTCCCATGATAACAAAGCACCGCACACCAATGGAATAAATCTTTCAGTTTCCATCTGTCAGCCATCCGTCCATCTAGATATCCAGTACTGGGTCAGTAAATGACGGATTTCATGTTTATTTTCAATTTAAAGTTTGAAATCTGAAGGACAGTTTCTAGAACTTGAATAATTATTTAAAGTAATGTGTGCTAAGAGACCAAGATTGCAGCCGTGTTTTTGCAACTTTAGGCAGGTTCCTGTTTCTTTAGTAAGATTTCATCGACATCTCACAGTTATTAGAGAATACTGAGCATAGCAGTAAGTCAGGCACAGCTTTGACCAATAACTAGCTTATATACAGCAGAAGTGACTTCTTGGGGGCCCAGGCCAAAAAGGAAGAGCAAGGTGGCAGAAAACCGAGCAAGTCCATGAAAGACTGGCACAGCCGGAAGCTAGACTTTGCAGGATCATTTCAGTCGGGTCATTCAACCAACCAACCATCCAGCAAACACGGCAGCAGCAGCTACAGGGTGGGGCGGGTGTGTCTGTGTCAGTATCCAGACACACACGTAGGACTGAAAACCAGACTTCGAAGGGTTTCTGGAAAACAATAAATGAGCAG TCONS_00156584 TCONS_00156583 . 3' 30587 TCONS_00156584 TCONS_00156583 . 3' 31188 EMBV3_21751 ACGGGACCATCCTCATCAACCGGGTGCTGGCCTCGTGCTACGCGGTCATCGAGGAGCACA Gene GeneID:286821|SHH:XM_002686985:822_cdna Constitutive 0 NULL GeneID:286821 4 GENE SHH NULL sonic hedgehog homolog (Drosophila) EMBV3_09465 CTCTGCCTCCAAGGACTGTCTGGCAATGACTCGTACTGGCCACCAACGGTAGATGTATAT Gene GeneID:534497|PMP22:NM_001101156:78_cdna Constitutive 0 NULL GeneID:534497 19 GENE PMP22 NULL peripheral myelin protein 22 EMBV3_15755 CCTACACCATCGTCTACTTCCCGGTTCAAGGGCTGTATGGGAAGGACCAGCAGGAGGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20308 AAGGTGCAGGTGGAGCTGACTGTGCTGGACTACGACAAGCTGGGCAAGAACGAGGCCATC Gene GeneID:539616|SYT5:NM_001083744:184_cdna Constitutive 0 NULL GeneID:539616 18 GENE SYT5 MGC151577 synaptotagmin V EMBV3_23952 CCCTGTCCAGAGGGGGTCTTATCCTTCTACTGAGGTTTCCACAGGCTCTAAACACAGAGT Gene GeneID:100298791|LOC100298791:XM_002694688:273_cdna Constitutive 0 NULL GeneID:100298791 17 GENE LOC100298791 NULL hypothetical protein LOC100298791 EMBV3_24487 GACTGAGTGGCCTAAGGAAGACCCCCCTTAATCAGGGAAATTACAGATGGGAATAAAGGC Gene GeneID:510399|MGC128008:NM_001034380:260_cdna Constitutive 2 NULL GeneID:510399 3 GENE MGC128008 NULL hypothetical LOC510399 EMBV3_08678 GGCCGGGGATGGAATGTACAAAAGTGGACAGAAAAGTGGCTGGACATGACTCGGTGCAAT Gene BVT0102_177478 + 0 NULL GK000015.2:14151879-14156345 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058329 1 XLOC_036073 Coding TCONS_00058329 XLOC_036073 Coding Coding CCDC82 15:14120304-14155914 j TSS43969 2505 1 TCONS_00058329_4 547 0.0251497005988024 10 0.9299334437923 1.00991053675464e-09 8.53376350956519e-10 1.88156724014167e-18 7.4701643524677e-37 1.03153073555961e-27 2.36215780902798e-10 5.37731705580113e-15 1.76223281938808e-10 1.63876414463299e-05 0.000341014623093633 7.63209788764854e-06 8.39085499619574e-05 1.30706715977467e-05 3.54121248514973e-16 3.7648711260456e-25 0.000196187568401548 1.76072896808075e-33 4.59453740859835e-24 1.30209910430656e-21 6.66785322777327e-20 9.3759550611621e-15 0.000127601244122713 6.10098833320603e-05 2.76606119975977e-05 9.77541024817175e-13 3.82702097406875e-36 2.56637378659463e-32 5.84107590322418e-05 1.04505105802032e-101 1.21477109263409e-41 NM_001046094.2 CCDC82 Bos taurus coiled-coil domain containing 82 (CCDC82), mRNA. 0.0 3348 99.95 0.741716566866267 XM_005274294.1 CCDC82 PREDICTED: Homo sapiens coiled-coil domain containing 82 (CCDC82), 0.0 1352 85.64 0.45748502994012 TCONS_00058329_4 sp|Q8N4S0|CCD82_HUMAN CCD82_HUMAN Coiled-coil domain-containing protein 82; 0.0 671 71.75 0.912248628884826 2 coding 0 0 0 0 0.0988510454438855 0.446874590148606 -0.0404206424061115 0.620380741321176 CCGGAAGGAGGGGGAACGTCGCCTGTCCGGACTTGGGTACCTAGGCGGAGGCGGAGGCGGAGGTTGGGGAGGTTTGAAAGGTTCTCGTTTCTGGGGGTCGAGCTCCTGTAAGCTCTGGGTGTCTGTGACGTTCCGCGCGGGTTCTCGCCAAGCCGTGTCGGAGGGTCCCGCGTCCCAGCTGCGGCGCCCTTCCCATCAGGTGGCGAGTGGTGGGCGGGCGGGCTTGCTGCGCCAGGCGTCTGTGCCCCGCGGAGGAGCCAGCAGTCATTGTGTAACGCTGGACTGGGAATCAGAAGACCTGGTTTCTAATCCCTGTTCGGTCACTAACGAGCTGTGTGATCTTTGAAGCTTAAGTGAAAATGGTACATGTTAGAAGACATGAAACAAGGAAAAATTCTAAAACACAAGGGCATGAACAGAAATCTCGAGTCGATTGGAGGCGGACTAAAAGAAATAGTCTCTTGCAGTTATGTGAGAGTGGTGACGAGCTTGAGAGTGATGAAGGTGTTGACAGTAATGAAAGTGTTGACAGTGACGAAGATCCTGATAGTAACAAGGGGCCTGATTGCATTGAGAAGCCAGAAGATGAAAGAGAGCTTAAGTTAATTAACGTTGAAGGTGAAGGAAACAGTAGTAAGCATCTCATTAACACTGACAATAGTTCAACATATGAAGAAGAACAGAACAAAACTAAACATGGTAGTATTGACTTAGCAGATCATGAAAAGGGTCCAGGTCAAGAGGAGGGTGATCTCAACAAACACACTGGACAAATAACAGAGGAGGATTTAGAAGAAGAACACATCAAGCGAGGGAAGAGAAAAAGGATCTCCTCTGTGATGTGTGACAGTGATGAGAGTGACGACAGTGATATCCTAGTTAGGAAAGTGGGTGTTAAACGTCCACGTAGAGTGGTCGAAGATGAATGTTCTTCAGTGGAGATGGAGCAAAAAAATCCTGAAAAAACTTCAGCCACAAGAAGGCGAGAACAGCTGCAGAAACTGGAAGAACTCTCAAAACAGAGATCTCGTCAGAGACATAATAGTAGTAGAGATTTTGAGGACTCTGAAAAGAAATCCTCCCCCAGCAGTGATGAAAATGATGTTGAGGAGGAAGAGGAAGAAGACAATGATTATGAATTTGATGAAGATGAAATCACTGATGAAGATGGAGATCATTATATTATTGATGGCTTTGTAGTACAAGATGAGGAAGGTGATGAAGAGAATAAAAGCCAACAAGGAGAACAGTTGACTACATCACAACGGAAATCAATAAAACAGAATTCTTTTTGTGACCACTATACTCACTTTGAAAGAGTTGTGAAGGCTCTTCTGATCAATGCTCTAGATGAATCTTTTCTGGGAACATTATATGATGGCACCAGGCAGAAATCATATGCACAAGATATGTTGACTTCTCTTTATTATTTGGATAACCGCTTTGTTCAGCCTCGTCTAGAGAATTTAGTCTCTAGAAGTCGTTGGAAAGAGAAATACAAGGAGCGAGTAGAAAATTATTCTAGTGTAGATATCCAATTGAAGACATCTGAGAACTGTTTGTGCCAGGCTTGTGGGTTGTATCGCCACTGTGAATACTCAGTGCATTTATCAGGAAAGTTGTATGACACCAGGACCATGGAAACAGATGATTTCATGTCACACGATAAACAGGTGTTTACTGTTGGCAGAATTTGTGCTGAGCGAACCAGAATTTACCATAAACTGAAACATTTTAAATTCGAGCTGTACCAAGAGTGTTGCTCCATTGCAAAGACAGAAGAGGTTGAGGATGAAGAGGTTAAAGAAACAGTGGAAAGAATTTTCAGTCAGTCAGAAAACAGTGGCTGGATTAAGGAGCACAATGAAAGCCTGTGTATCGCCGTGACTCCGGGCGGCGGAGCCAGTGTCAGCCCAGCGGCGAACAACAGACGGGAAAAAGAGAAAGGAAAAGACCGGCTACTTTCTTTTCCATCTCTCAAAGCGGAGCAATCCAAGAGATAGAACCACATTGCTTATTGCGAGTCCAGACCCTCAGATCCACTGGCCGGGGATGGAATGTACAAAAGTGGACAGAAAAGTGGCTGGACATGACTCGGTGCAATTTGCTGGAAGTTTGTAAGTTTGACCATCGTTTGTAAATTACTCTCGGAAGAGTTTGTCTCTCTTGATACTGTATTAGAATCGAGCCGGGGGTGAGGACTAGAAACGTAAGCGGGAAAGAAGAAGGAAAAAAAAATATGTTGAAGGATCTCTCTCTCAGTGGCTAGTGACTTCAGACTGCTTTCATTTAAGGCTGGGAAACCTTAGAGGGAATGAGGATTTTACCGGTGATTGGATTAGCTGAAGAAAAAAGCATGGTCCAGAAGTCCAATTACTGACATTAACAATTGAAAAGCTGTCTCCCTCTTTGGGGAGAAGACCACATCCTACAGCACCCCCAAAGAGGAGAAAACACCGGAGCAAAGGGAAAGGGAGGAAAAATTAAAAGCCAAAAGACAGTCTC EMBV3_37543 TCTTTACACATTTTCTGGTCCAGATTCTTCAATACATATTAAAACTTTGGAGTGGTGGGA Gene BVT0102_123749 + 0 NULL GK000020.2:10441127-10455655 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114512 TCONS_00114513 TCONS_00114510 TCONS_00114511 1 XLOC_069304 Coding TCONS_00114511 XLOC_069304 Coding Coding SLC30A5 20:10453346-10471885 j TSS85400 4869 1 TCONS_00114511_5 668 0.192031217909222 14 0.738105513000324 1.34857272738643e-45 2.21982186245129e-05 5.90178488830107e-12 3.31579253979324e-120 2.35873402740301e-82 7.31839071006864e-89 1.02099273224128e-119 2.11886039296703e-05 5.51872786480047e-05 7.12769318509202e-05 1.09891933849798e-06 5.76352699983017e-06 2.76124359546267e-05 6.42668006515623e-06 6.83744136588034e-06 0.00204239361948719 0.000160935714740055 0.00117580587563654 2.38839255387349e-42 1.21709355379537e-05 1.88636967238399e-236 0.00200662087758316 0.000591483884114614 0.000485597096583595 4.66797236547668e-103 4.92131003060092e-150 3.02605933698774e-211 1.67725966611944e-39 8.79145438355254e-09 0.000755780385295717 NM_001192174.1 zinc transporter Bos taurus solute carrier family 30 (zinc transporter), member 5 0.0 4525 100.00 0.5150955021565 NM_022902.4 zinc transporter Homo sapiens solute carrier family 30 (zinc transporter), member 5 0.0 4323 87.18 0.726637913329226 TCONS_00114511_5 sp|Q8R4H9|ZNT5_MOUSE ZNT5_MOUSE Zinc transporter 5; 0.0 1190 91.17 0.998502994011976 1 coding 0 0 0 0 -0.133912452322752 0.260450495440927 0.0711701520174671 0.355314239162309 CCTGCTGGAGAAGAATTTGAAGACTAAAACATTTTATGTTCCTGGCAAACTGTGGATCAAAATATTTAAACACGCGATGGCTGGGTGTGTCATTTCACTCTTGTGGTTTTTTGGCCTCACGCTTTGTGGACCACTAAGGACCTTGCTGCTATTCGAGCACAGTGATATTGTTGTCATCTCACTGCTCAGTGTTTTGTTCACTAGTTCTGGAGGAGGACCAGCAAAGACAAGGGGGGCTGCTTTTTTCATTATTGCTGTGATTTGCCTGTTGCTTTTCGACAATGATGATCTCATGGCTAAAATGGCTGAACACCCTGAAGGACATCATGACAGTGCTCTAACCCACATGCTTTACACAGCCATTGCCTTCTTAGGTGTGGCAGATCACAAGGGTGGAGTATTGTTGCTAGTACTGGCTTTGTGTTGTAAAGTTGGTTTTCATACAGCTTCCAGAAAACTCTCTATAGATGTTGGTGGAGCCAAACGTCTTCAAGCTTTATCCCAAATCATTTCTGTACTTCTCTTATGCCCATGGGTCATTGTTCTTTCTGTGACAACTGAGAGTAAAGTTGATTCTTGGTTTTCTCTCATTATGCCTTTCTCAACGGTTATTTTTTTTGTCATGATCCTGGATTTCTATGTCGAGTCCATTTGTTCAGTCAAAATGGAAGTTTCCAAATGTGCCCGCTATGGATCCTTTCCCATTTTTATCAGCGCTCTACTGTTTGGAAAGTTTTGGACACATCCGATAGCAGGCCAACTCCGGGCTGTGGACAGAGCAGCACTCCAGGAGGGCACGGAGCACGTGCTTTCTGGAGGAGTGGTGGTCAGCGCTGTGTTCTTCACCTTATCTGCCAACATCTTATCATCTCCTTCTAAGAAAGGACAGAAAGGTACCCTCATTGGATATTCTCCTGAAGGAACACCTCTTTATAACTTCATGGGTGACGCTTTTCAGCATAGTTCCCAGTCCATCCCTAGGTTTATTAAGGAATCACTAAAACAAATTCTTGAGGAAAATGACTCTAGGCAGATCTTTTACTTCTTGTGTTTGAATCTGCTTTTTACCTTTGTGGAATTGTTCTATGGCGTGTTGACCAATAGTCTGGGTCTGATCTCGGATGGATTTCACATGCTCTTTGACTGCTCTGCTTTGGTCATGGGACTTTTTGCAGCCCTGATGAGCAGATGGAAAGCAACTCGGATTTTCTCCTATGGGTATGGCCGAATAGAAATTCTCTCTGGATTTATTAACGGGCTTTTTCTAGTGGTAATAGCTTTCTTTGTGTTTATGGAGTCGGTGGCCAGGTTAATTGATCCTCCGGAATTAGACACACACATGTTGACACCAGTCTCAGTTGGAGGGCTGATAGTAAACCTTATTGGTATCTGTGCCTTTAGCCATGCCCATAACCACAGCCATGGAGCTTCTCAAGGAAGCTGTCACTCGTCTGATCACAGCCATTCACACCACGCGCACGGCCACAGTGACCATGGGCACGGCCACGGCCACAGCCACGGATCTGCAGGCAGAGGCATGAACGCCAACATGAGGGGTGTGTTTCTACACGTTTTGGCAGACACGCTCGGCAGTATTGGTGTGATCGTGTCCACCATTCTTATAGAGCAGTTTGGATGGTTCATTGCTGATCCCCTCTGTTCTCTTTTTATTGCTGTATTAATATTTCTCAGTGTTGTCCCACTGATTAAAGATGCCTGTCAGGTTCTACTTCTGAGGCTGCCACCAGAATATGAAAAAGAGCTACATATTGCCTTAGAAAAGCTACAGAAAATTGAAGGATTAATATCATACCGAGACCCACATTTTTGGCGTCATTCTGCCAGTATTGTGGCAGGAACAATTCATATACAGGTGACATCTGATGTGCTGGAACAAAGAATAGTACAGCAGGTTACAGGAATACTTAAAGATGCTGGAGTAAACAATTTAACGATACAAGTGGAAAAAGAAGCATACTTTCAACATATGTCTGGCCTGAGTACTGGATTTCATGATGTTCTGACTATGACAAAACAAATGGAGTCCATGAAATACTACAAAGATGGTACTTACATCATGTGAGATAACTTGGGAATTACCACTGGGGTTTGAACAATGAAGATTAAAAGGCCGGGTATTTATAATACCACCAGAAGGAAGAAAATTGCACATAATTGTACAGAAACATTTTGTTGCTTTTGAAAAAATTTTTAAAGCTCCCTACAGTTGGATCAAGGAATCTTTCTTAAAGGAAATTTAAATATAGAATGAAGCATTAATTGTACAAGTAAAATAATTGTTGAAATTATGTGTAAAATAGCAAACCTGAAATTTGAGTGAATGTGATGTAATATCACATCATCTTCAAAAATGAACATATAATGATGGATTCAAGTGAAGACCAAAATTACTTCTGTGTGTTTACTTTCCTCCAGAAAGCATCTCCACTGTAAATAATGTATGTAACATGTTTATTACAAATACCCAAATGAAAAAAATTCAGTCACTTTTTTGCATAGCCCTAGGATAAAACAGGAATAAAAGATCTATATTTATGGACTTTCTGTATATAAAACTGGTTTCTAATTATAACTTAAATCCATTAAGTAAAACCTTGTTGCCACTTTAAATGTAAACTGAATTACTTGGGAGAGACCTCAGCCATTGATAGGAGGCAGCAGTGGGGATGTGAAGGACAGCATGACAGATTTTGATGCGTTACAGAAGTCAACCACTCTGTAAAATAAATTTTTTTTTTTTACTTTTGGTAATATTTGCAAATGAATAATTGCTTTATTAGGGTAAAGAACTTAGACTAAGTTGTGTCCATGTTATTCACTCACTTGTCTTCTTCTAAAGTAGAATATTCCACTTCTTGTTATGCATCTGGCATTCCAAGTTGCTTATTAAGCTGGTATCCAAGCAGTGCTAGGCTTTTCATCTTTTCATTTAGCTCCATATACTGTGGAAGAGCCAGTGGAGAGAGTCATAGATAACTGTCAACTCAGAGTTGAATTTTCTGCCTAAAAATGTAACTTAAAAAAAAAAAAAATTTCTGAAACATATCGCTATAAAAGAAACATCAAAGAATTAGGTGGTTATTTTAAAGTTTAATAAGTAAATCTTGTTCATAAACCCTTGGGCACTATGAAATCAAAATACCCTATAAGTACTTTCTGTAATAATATCTAATTTATATTTTTTCATTTACGATTTAAACTGAATGTATAGTCTGAAAAGACTGTATGATAAATAGATACATAATAATATATGCAGTTCTATGAACACCAAAGAATGTTGTCCAAAAGAACTTTTGAATACCTATTTATAAGCATCTGAATATTTTCTCTCTTATACTAGGAATTTTGATGAGTAGGATGAATTAATTTTAGTATGGGTACTATTTTCTTATCTATACCATAATGGCAAACATGTATTGTAAATCATATTTTTGTCTTACAAATTTTAATATGTGAGAGGTTTTAGAAATTTGTTATAAGTTATTTTGATATTCCTTGTCTTCTCTTTACACATTTTCTGGTCCAGATTCTTCAATACATATTAAAACTTTGGAGTGGTGGGAAAATAATTGCATATGGATGTTTTAATGTAATTTTTATACATTAAAAAATTTAAGTAGATAGGTACAATATTACATCATTTTTTTAAATTGTATTTCCCTTTAAAAATAAAATTGTCATCTCCCTTAGAAGGCATAAAAATAGCAAGAAAATTAAGCTAATGTGATTGACAACTATCAAGATGAAAGAGAAGGCAGCATGAAGATATGACTTTAGGCAAATCAGCTTCTGGTTTGTATTTTTTTTTTTCTCATACATAAAATCAGAATACAGTCTGCTTAAATTCCGGAGCAACTGGAACCCAGACACTACTAGTAGGAATATGAAATGATGCAGCCACTTCGGAGAACTGTTCAACAGTTTCTTTTAATGTTGAACATACATCTGTCCTGTGACCCAGCAGTTCCACTCCTGGGTCTTTACCCAAGAGAAATGGAAACATGTCTATAAAAAGAGTGGAACAAGAATGTACATGTTTGTGACAGCCAGAAACTAAAAGAATCTAAATGTCCATCCTCAATAGATAAGTAAATTATGGTATATTTACAATAGACTACTACTCAGCAGTTTTTTAAATTACTGTTAGAAACTATATAGGTGAATCTCAAAAACATAAGTGAGGGACTTCCCTGAAAGTCCAGTGGTTATGACTGTGCTCTCAGTGCAGGGGGTGAGAGTTCAGTCCCTCGTCCAGGAACTTAGATTCCTACATGCCACAGGGTGCAGCCAAAAAAAGAATAAGTGAAAGAAACCAGCTACAAAAGAAGGCTGGGTTTCCCTGCTGGCTCAGCTGGTAAAGAATCCGCCTGCAATGCAGGAGACCTGGCTTCAATCCCTGGGTTGGGAAGATCCCCTAAAGGAGGGCGTGGCAACTTGCTGCAGTATTCTTGCCTGGAAAATCCCCATGGACAGAGCAGCCTGGTGGGCTACAGTCCTTGGGGTCTGAAAGAGTCAGAGACACGACTGGGCGACTAAGCACAGCACAAAAGAGGTCTATATGGTTCCATACATGTAAAGTCCAAAAACAGAGAAGATTACTTAACACAAACTTATCTTATACTTCTGCAGTCAGAAGCTGAAGATGGGACTTAGTGGCCTAAAATCAAGTTGCCACAAGGCTGCATTTCTTTATGGAGGCTCTCAGAATCCATTACCTCATTCATTTCAAGTTGCTGGCTGAATTCAGTCCTATAGTTGTGATTGAGGTCACTGTTTCTTTGCTGCTATTCCCAGATTCTAGAGACCACCTATATTTTTTGACCACCCCCTTCCTCCATCCTCAAAGCC EMBV3_34604 GGCTGCAGGAGGAGAGCGTGCGGCTACACCAGATCAACATCTACCTCAGCGACCGCATCT Gene BVV0102_184349 + 0 NULL GK000008.2:64293419-64322309 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38268 GAGCCAACTGCAGAATATGTTGGAATGTCTGAGGGCAAAACCTGGACAAATAATGCTGAG Gene BVT0102_170220 + 0 NULL GK000004.2:47635333-48074605 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183912 1 XLOC_111232 Coding TCONS_00183912 XLOC_111232 NonCoding Coding - 4:47830172-47972541 - TSS137073 813 1 TCONS_00183912_2 80 0.124231242312423 3 0.994310519217802 0.000872092266609386 0.0028049814219177 0.00110966585526489 0.000410976820998107 0.00119765244836271 0.000513088727959887 0.000716541718042332 0.000576915204498105 0.000978949121228214 6.36147620830258e-152 3.02148137601887e-06 2.32696289605752e-05 0.000209605183020683 1.57660199090764e-05 9.04788360802823e-296 6.49733874212781e-05 0 0 0.00680460103583651 0.00993785580345872 0.00231271459740871 0 1.33453331760722e-240 0 0.0028773515530444 0.0021361071966019 0.00196514655379103 0 0 0 0 noncoding 0 0 0 0 -0.729297554662668 0.017264235625259 -0.0240277462586443 0.683206391122583 GTTCAGGGAGGGCTGAGCTGGGCCCCAGGGATTTGCATTTCTAACGAGTTCCAGGTGATGCTGATGCAGGTGATTATTCCAGCATCACACGTTGAGAGTCCACACTTATAAAGGATAGATGTGGACTTGGCCACCGAGGGCAGCAGGCATGAGTGAAGCTGACGGTCTTCGGGGCCCCTTCTTCTGATGGAGTCTTTTCAATGAACTAGAGAAAGGAAAGCACATCTTCCCATTTAGAAGTCCACGTTCCCACGGGCGGAATATTTTACAGGACCCCCGGGGCCAGAGTTGAATGTCTTCCAGACAGCCAGAGAGCGGAGCAGGCTCCAGGAGTGGGGAGAGCCATAGAAGCCAGCTCCTGTGTTCTGCTCAGCGAAGGAGAATGGAGCGATGCCCCTCCTCACATTTTCCAGACTCTCCTGCTTTCTATTCCTCTGCCCTGCCTCATCTTCTCCAAGATGCAGCACACCCACCTGCATCTTTCATCTTAATTAGAGGATTTTTCCCAAGGGTTCCCAACATTGAGAGTTTTTAAAAGCTATCATTCATTGTCTCTTGAGCTAACTGCAGAATATGTTGGAATGTCTGAGGGCAAAACCTGGACAAATAATGCTGAGTTAAGCTGACTAGTCATTAGAAAATCAAAACATATCCTACTCTAGGCCCCTTTTATACCACCATGGATCTGTAATACTTTCAGAAGTTTCCGTGGTAACAGCTGTTCACTTTAGTTCTAAGTAATCCCATGTGAATGAGATTGTCAGTGGGAATATGGTTGGTTCTACGCCCATCATAATCTTAAGGAAACATCAA TCONS_00183898 s 5' 31918 TCONS_00183906 TCONS_00183906 s 5' 0 EMBV3_01980 CTGGGAGAATCTACGGTGGGGAGCAAGTACAGATACATTGGGCACTTCGACTATCTTGTG Gene GeneID:100337450|LOC100337450:XM_002689276:30_cdna Constitutive 0 NULL GeneID:100337450 7 GENE LOC100337450 NULL PRELI domain containing 2-like EMBV3_30792 CTTTCAGTCTTGGAGCAAACTTTCCAACCTCTGCCCTGTATCTTGCTATCCACTGTGCAC Gene BVV0102_064691 + 0 NULL GK000011.2:21151579-21164543 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024330 TCONS_00024331 1 XLOC_014484 NonCoding TCONS_00024330 XLOC_014484 NonCoding NonCoding - 11:21154792-21156383 - TSS17886 289 1 TCONS_00024330_1 43 2 0.819496855345912 2.47294630227686e-09 0.00058878062131094 0 2.87341254586703e-05 0.000512509770797666 0 2.61309040183908e-05 0 0 0 0 2.47452132381924e-05 0 0 0 0 0 0 0 7.1003219964541e-05 4.20170131734226e-05 0 0 0 1.51976795448874e-05 6.20392585276579e-11 1.1545700444335e-11 0 0 0 0 noncoding 0 0 0 0 -0.300549659755314 0.122242295399736 -0.0413648809859935 0.459862414859701 GCCAAGACCACCGCTATCACTGTGTCCTGCTCGCCACCTTGTCTGTCTGCCACATGTGATGGGTTGTTCCTCCAGGACTTTTCTTCAGATTCCCAAGGGGAGATCCTCCCCAAAGCCAGCTCCAGGGCAGTCTTTGAACACAACTGGTGTCAAGAATATTTTTCAGAACAAAAGGTTTTCAGGACTTTGAGTATCTTTCAGTCTTGGAGCAAACTTTCCAACCTCTGCCCTGTATCTTGCTATCCACTGTGCACTTGATTTCCTAAATCTCTCCTCCTAAATGTTATAG TCONS_00024325 TCONS_00024327 TCONS_00024328 s 3' 469 TCONS_00024325 TCONS_00024327 TCONS_00024328 s 3' 469 EMBV3_07175 GAAGAGATTCTAAAAAAGGAGAGAGCTAGTGGAAGCTATCTTGTCAGCCAGCTGAAGCAG Gene BVV0102_346788 + 0 NULL GK000009.2:95368978-95501806 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38833 GCCAAAATCAACTGTTTGGTGAAGCCCTCGAAACACCTATGCTTTGCATGCATTCATGTG Gene GeneID:512685|WIPI2:NM_001046129:155_cdna Constitutive 0 NULL GeneID:512685 25 GENE WIPI2 MGC128834 WIPI1 WD repeat domain, phosphoinositide interacting 2 EMBV3_00562 ACAGGGGCATGAGGGAGAGGGAGTACGTATGTGCATGAGAGAGGAGTAATGGCCTAAATA Gene BVV0102_404142 + 1 EMBV3_03435 GK000015.2:68698589-68996827 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39737 GGGGCTTCTCTAGTAGGTGCGCATAGGCTCATTCACCCTGAGGCATGTGAGAGCTTAGTT Gene BVV0102_448803 + 0 NULL GK000002.2:5211360-5230001 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13760 GCATCCTTCGGTAGAAGTGAAAGCTTATCGGCAAATGGCCCTGTTAAGTTCTGCTTTTGC Gene GeneID:526444|CASC1:NM_001046282:37_cdna Constitutive 1 NULL GeneID:526444 5 GENE CASC1 MGC137081 cancer susceptibility candidate 1 EMBV3_34609 AGCAAATGAGGTACCGCACCTTAGAACAGAGCGGAGTTACGGTCTAGCTACCAGACCTAG Gene BVT0102_035790 + 0 NULL GK000001.2:109729696-109763290 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11729 CCTTGCGGCGCACCCAGTGTTACCGTGACGAATCCACCTCACTGCCTGGAGATCACGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00640 GGGTTGCTGTCTGCCTGCTGTCTGCCTGGTGTGCTGTGACATTTTGAAGGTGGAAACATT Gene GeneID:100174924|LOC100174924:XM_002690200:57_cdna Constitutive 2 NULL GeneID:100174924 9 GENE LOC100174924 NULL hypothetical LOC100174924 EMBV3_30187 AACTGAGAACTTAATCTTCCAAAATGTCAACAAATGCCCAGCACACCAGGGTTTGTGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03251 GCACACTGCGACAGGAATTTGTCCTTTAAAATCACCCGTCCCTCGTAAGAGTCTAAGTCC Gene BVV0102_267684 + 0 NULL GK000023.2:6161542-6529132 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245802 TCONS_00132043 TCONS_00135976 TCONS_00132044 TCONS_00206858 TCONS_00143729 TCONS_00118448 6 XLOC_150831 XLOC_080693 XLOC_082196 XLOC_125378 XLOC_088149 XLOC_072614 Coding TCONS_00132044 XLOC_080693 Coding Coding - 23:6503587-6514126 - TSS98881 10539 4 TCONS_00132044_18 250 0.98386943732802 1 0 6.91386853646036e-06 5.8180679914017e-10 1.77425078968025e-06 2.98945933474529e-06 7.23112466574199e-07 7.2543812519583e-07 2.86823549368478e-07 5.43576291631523e-07 4.5644938654399e-10 0.00245031154642502 0.00136887488923508 0.000746126709361422 3.48888650957522e-05 2.70108547269376e-05 1.19854336443697e-05 0.000595331406894576 1.79150368823397e-05 0.000175519788414207 4.65375524351603e-06 4.84106864001845e-06 3.60691206034732e-06 0.000363055702819122 0.00127688401493399 0.00152397466029378 2.06060040868432e-06 4.61560475884119e-06 4.20343782126694e-06 0.00167254330596053 0.000688679397276631 0.00294276261346621 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2354 88.59 0.169750450706898 TCONS_00132044_6 sp|Q68D85|NR3L1_HUMAN NR3L1_HUMAN Natural cytotoxicity triggering receptor 3 ligand 1; 6e-27 108 50.53 0.385245901639344 1 coding 1 1 1 1 0.00873526398923069 0.936711850600719 0.00213676007493552 0.963420665065439 GTAGGTAGAATAGGAAAAAGGAGTCCAAAATGGTGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGCAGGAAAAAACATATAAAAGGAGGAGCCAAAGCGCTTTCTCTCGGACTCTCTCTCCCGCGTGCATGCGTGCACGCTCTCTCTCTTTCTCTCTCTCTTTTTCTCCCTCCCCATGCACTCTTCCACTCTCTTCTCTTCGAGTCTTGGATTCTCCTGCTATCTTATAAATAAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAGCACGGTTTGTCCAAGACCTGAGAGCTGTGACGCGCCAAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGCGACGAGACAAAGAACTGAGGAACATACACTCGAGTGACATCTATGGTGCCGTGACTCGGATTTAACCTGGCTGAAACAACCTCTACGTGGAAGAGGCCAAGCACAACAGGAGCCCAACTCAGCGAAGCTCCTGTGCTAGAAGCAGAAGGTGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACCGGGACAGCGAAAAATGAACTCAGCAGAAAGCTCACGCGGCCCAGTCTCAGATTCCAGAAGACCTCCAGTTAAGGTAAGAGATCCTCGCTCCTATGGCTGGAGGGACCTTTACAATCTCTTATTTCTTGTTTCCTCGAACCTCCCGCTAACAGGCGGGCCGCAGGGGCACAACTGAGGGACTCTGGAGAGGTGCTCCTCAGCATGTCCCAAGGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGCTGGGGGTTCTTCTGTCCTTTCTCTTCTCTGTGCCAAAGATTAGACTAAAGAAACTGTGAGCACCGGTCAGATATTTAGCAAATTTTCCAGCGGGCTATGAAGGGGATTCCTTGGCATGTTTTTCCCACTGTTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCCGGCCAAAACTAATGAAACTCAGGCTCTGATGTCCCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTCGATTTGTTAGGATCCAGAGAGAAGCTGGATCTTCAGGGTGTGAACCTCTTCAGGGTGTGAACCATTGCTGAGGGCAAGGGCTTCGGCCATGGAATTAGGCCTGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATGAGTGAGAGGATCATCCCAGCCATTGGGGAACGACCCACTCCTCCCTCTTCTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTGGGTGTGTCCGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAAGTTGACTTGTCATCTTGGACCCAACTGATTTTAATTGGTTTACATTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCCATTCCCTCTTGTTTCATGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGAACGCCCAAACTCCAGTCCGGGGGGTCCCAGGAGGTCATCACGCCTTGACCTGCCTAGGGATCGGTCCTCGAGAGGTTGTCACGCCTCAACCTACTCGGGGATCCTCTAGTCCCAGGGGTCCCAGGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGTCATCATGCCTCGACCTGCCCGGGGATTCGATCTCTAGGAGGCTGTCACGCCTCAGTCTGCCTGGGGATCTGCACCCTGACCCGGGGACGCCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGACAAGCTTAAATCGAAAGAGGTCTTTTTCTTTTCTCCCTGTCATGACTGTCTTTCAGATGGGAAATAACAAATCCACTTTCCGGCAGACGCCCTTGAAATGTATCCTTGATAACTGGAAGCTGTTCGACCCTCTAGCTCTAAGGAGAAGTCGTTTGAAATTCTTTTGTGCCATTGCGTGGCCCCAGTATCCACTGGGGGACGAGGAACACTGGCCTGAGGATGGAACTTTAAATTACAATACCATCCTGCAATTAGAATTATTTTGCAAAAGACAAGGGAAATGGACAGAGATCCCCTATGTCCAAATTTTCTTCTGACTAAGAGATATGAAAGAACTCTGTCTTAAGTATGGGATTGTAGTACGCCCTAAAAGTGAGCCCACTGGGCAAATGGTATTAGGCACAGGCAACCATGAAAAGGAACCCCCTCGTGAAGGCTCACCTCCCACAGCTCCCGAGTTGCCTGGTGCTCCTTCCTCGTACCCAAATGTGCCCCCATACCCGGGAGCACCTCCTCCACAAAAGCCAGCTCGAGTATGTCCCTTAGTTGAAACTGGAGGAGAATTCGGACCAACCCGGGTCCATAAGCCCTTCTCCCTCTTAGAACTAAGGCAGATCAAACAAGACCTGGGAAGTTATACAGATGACCCAGGCAAATATATAGATACATTCCAACATATTACCTTGGCCTTTGACTTGACGTGGAAAGACATCATGGTCATATTTAGTCAAACTTTATCTGATCCTGAACATACCAGGGTCTTAAAGGAAGCCCGGAGGTATGCAACAGGGCTCCACATGTCCAGTGATAGATACCCAGTAGGGCAAACTGCAGTCCCCTCCTCTGATCCTAATTGGAATTATAATGACCCTGAGCACATCTGGGAAAGAGATCATTTTCTAATCTGTGTGAAGGCAGGACTGAGAGCAGCCCAACAAAAAGCTATGCCCAGGTCTCAGCAATAACTCAGAAGCCCAGTGAGAACCCCATTGCCTTTCTGGAAAGGCTAAAAGAGGCCCTCCAAAAGTTTACCAACCTGGACTTAGACTCTTAAGAGGGACGGGTGATTTTAAAGGACAAATTCCTGTCCCAGTGTGCATCAGATATCAGAATTAAGTTACAGCAGCTATAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGAGAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAGAAAGAAAGAGACAAGGCATGCCCAGATGCTGGCCGCCCTCCAGAGAAGCCCTATGGCAAACCCCAAGTCCTTGAGGGACAAGGCACGAGACAGATGCCTGATCTGTAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACGGCTTGCCACAAATGCCATCAACTGGAACATTGGGCAGCACTCTGCCCTTGGGACCCAAGAGTCTCAAGGTCAAGCGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGCGGCCCGCTCCAGCCAGCCCGCCTGTCACAGATAACCATCATGGGGCTGGAGCCAAGGGTGCAACTGGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTACAGGAAAAGCAGCTACTAAAAGATTCACCCGAGCACTTCTTTGTTGCTGGGATGGACAAATATTTTCCCACCAGTTTCTGGTGGTCCCTGAGTGTCCTACCCCCTTATTGGGAAGAGACATACTCACTGAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAACCCATTACACCTTCAATAGAGAGGGACCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGACCAGGGATTCCTGGACAAGCCCACCAAGCTGAACCGGTCATCATTGTCCTCCGAGATCCCACTCTGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGGGGCTCGGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGCTTGTGGGCTATTGGCCCCCACCTGTTCGCCATGGAACACCCCAATCCTCTCAGTAAAGAAAAAAGACGGAACCTGGCAAATGGTTCAAGATCTCCGGATTATAAATGAAGCTGTAGTCCCCCTCCATCCCACAGTACCCAATCCCTATGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCCTGGATCTCAAAGATGCATTTTTTTTTTTTTTTTGCATACCACTGGCTAAAGAATCCCAATACCTTTTTGCCTTTGAGTGGGAAGCCTCATGAGAAAAACACCAACAGACGACTTGGACAGTATTACCTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGACAGGCCCTTGGCTGGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATATGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCACAAATGGGATATAAAGTCTCCTGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATTGGGTACAAGGAATTCTCCAGTTGCCCTCTCCCATGACTCAAAAACAATTGCGAGCTTTCCTTGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGACGAGATGATTCAATCCCACTTATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTATGTCCATGAAAGAGAGGGAATAGCCTTGGGATTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCGATCCAACTACCCGAGGTTGGCCCCCCTGCCTTTGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTATTTTTACCAGCCACCAAAAATGGGAGAGGCCACTTATGGATGTCTGATCAAAGAATCCTCAGATATCAAGTAATGCTGATGGAAAATCCAGACCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTACCTACCCCCGAGGGCTCTCTCCCCTTTCTAGAAACCTTGGACCACTGGACAAAACCCCGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATAGAAAAAGAAGAGCCGGGTATGCAGTAGTCTCCAATTTTGAGACCATAGAGGCTAAGCCTCTGCCACCAGGTACTTCAGCCCAGTTAGCTGAGCTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGATAAATAGCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCGACTCTTGGAGGCAGTCCATCTGCCACTGAGGTTTCAGTCTCCACTGTAAAGGACACCAAAAAGGGAACACAGAAGTGGCACTAGGGAACCAAGCAGCTGATCAGGCAGCCAGGAGAGCAGCATTACAGAACCATGACCTAATAGGGCTTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGTGAGGGCTTTCAAGAAGATCATATGGGGTAGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGGAACCTCCAATGGAAGTTGGTTAACTCCTTACCTGCCACTACTCATTTAGGAGAAAAGGCCCTTCAAAGATTACTAGAAAGGTCCTTCAGAGGAACAGGCCTCCAAACAACTATAAGACAGGTTGTCTCCTCTTGTCCCACTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCATCTCCAATGACATGGGGCCTAGCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGATAGATACATTCACAGGATGGATTGAAGGCTTCCCCACCCGGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTCGGTCTGCCCAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGGGTCTCGAAAGCATTGGGCATTACTTATTACCTCCATTGTGCCTGGAGGCCTCAATCTTCAGGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGGCCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCCGCACCCGCACTGCCCCTAAGGAACAGGTTGGTCTTAGTCCTTATGAGATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTGTACCATGGCCATTGGGCAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCCAAAGAGTCACCTCTATATGCTCCAGGAACACAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCACGAGTCAAGCTGTAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGATACCTATTCAGAACTACCAATGAGTGCCATTCTAATGAACACCCCCAAAATCTGGCTTCTGGGGATAAGATTTCTCAGGATAGCTCTAAAGAGCCAACAGAGCTTGACAGAGACTATACTCCAAAACAGACAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCTATCCTGGCGATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTCGTTATGCTATATTGATGATGCCTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAAATATAAAACTACAGCTGACCACAGAAAATATCACACACCCTTGGACACCGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCACCGCCCCAGTTCAGCAGGAAGTAGCCAGAAAGACCTCGACACCCCTATTCCCAAAGAATTGGGCCTCCCTTCTCTTGAGGGGGGAATGTTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGTGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCTCAGGTGCAGGAAAAAGCATATAAAAGGAGGAGCCAAAGCACTTTCTCTCGGACTCTCTCTCCCGCGTGCATGCGTGCACGCTCTCTCTCTCTCTCTTTCTCCCTCCCCACGCACTCTTCCACTCTCTTCTCTTCGAGTCTTGGATTCTCCTGCTATCTTATAAATAAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCACGGTTTGTCCAAGACCTGAGAGCTGTGACGCGCCGAGGGCTTTAATGTCCATTGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCAAGGAACATACACTCGAGTGACACATAGATTCGAGGGATCAGATCTGATAGACAGAGTGCCTGAAGAACCACGGACGGAGGTTCATAACATTGTACAGGAGGCAGTGATCAAAACCATCCCCAAGAAAAAGAAATGCAAAAAGGCAAAATGGTTATCTGAGGAGGCTTTACAAACAGATGAGAAAAGAAAAGAAGTGAAAGGCAAAGGAGAAAAGGAAAGATAAACATATCTGAATGCCTGCGAGCTAGGAGCTAGGCCAGGTTTTGTGACCTCCCAGGAGAGGATTTCAATCTGGGGTCAAAGACAAGGCTTGATCACTTGAAGCTTTTGTGTAATAATGTTTTATTAGAGAATAAAGGGTAGACGAAGCTTCCGACATAGGCATCAGAAGGGGGCAGAAAGAGTGCCCCCCCTTGCTATTTTTTAGCAAGGAGTTATTTATCTGATACAACCTCAAAACTGGGAGAGTTGCATCAGGCACCTCTCCCACAACATGCATCTTGGGACAGCATTGGCCCAAGGTGAGTCATCCCCAGTCGTAAAACAATTGATACGAATCTTAAAGAAAGGTAGATTCCAAGGCAAATACACAGTTCATTAACATAGCTTAAGAAACATTTCCATAAGAAAAGCCCATTGGTTAGCTCAAGGTTTGAGAAAAGTTAAGCTCAGGTGGAACCAGGTCTCATCATGACAACAGAGAATTTAAAAGAAACCTTTAAATTTTGTATAGAGAAGGGGAAAAATGTCTGTCATTTGCAGTTTGTTTCCTCTTGCTGCTTAAGAGAAAAAAAACCTCTGCCACCTGCAGTCTATTTCCTCCACTTGGGGACTCCTAGCCTTCCCACCTGTTACCCACTCAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAACATTAAACGCAAAGATTGGCACAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGACATTAAGAAGAGGTAGCAAGAAAACTATACAAAAAAAAAAAAGATCTTTATGACCTAGATAACCACAATGGTATCATCATTCACCTAGAGCCAGACATCCTGGAGTGCAAAGTCAAGCAGGCCTTAGGAAGCATCACTACGAACAAAGCTGCTGGAGATGATGGAATTCCAGATGATCTATTTCAAATCTCAAAAGATGATGCTGTTAAAGTGCTGCCCTCAATGTGACAGCAAATTTGGAAAATCCAGCCATGGAAAAGGTCAGTTTTCATCCCAATCCCAAGAAAGGCAATGACAAAGAATGTTCAAACTACCACACAGTTGCACTCATCTCACACACTATCAAAGTAATACTAAAAATTCTCCAAGCTAGGCTTCAACAGTACATGAACCAAGAACTTCCAGATGTGCAAGCTGAATTTAGAAAAGGCAGAGGAACAGAGATCAAATTGCCAACATCCACTGGATCACAGAAAAAGCAAGAGAATCCAAGGAAAACATCTACTTCTGCTTTATTAACTACGCTAAAATCTTCGACTATGTGGATCACAACAAACTGTGGAAAGTTTTAAAGAGATGGGAATACCAGATCACCTTACTTGCCTCCTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGCTACAACTGGACATGGAACAATGGACAGGTTCAAAATTGGGAAAGGAATACATCAAGGCTGTATACTCTCACCCTGCTTATTTAACTTATATGCAGATTACATCATGCGAAATGTCGGACTGGATGACACACCAGCTGGAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAGAACTTCCTGATGAATGTGAAAGAGGAGAGTGGAAAAGCTGGCTTAAAACTCAACATTCAAAAAACCAAAATCATGGAATCCAGTCCCATCACTTCATGGCAAATAGATGGAGAAACAATGGAAACAGTAACAGACTCTATTTTCTTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCGTGAATTAAAAGATGCTTGCTCCTTGAAATAAAAGCTACGACAGTGTATTAAACTTAGTGTATTAAAAAGCAGAGACATTACTTTGCCAACAAAGATCCATCTAGTCAAAGCCATGGTTTTTCCAGTAGTCGTGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCCTAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAGGACTCTTGAGAGTCCCTTGGACTCCAAGGGGATCCAACCAGTCCATCTTAAAGGAAATCAGTGCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTTATGTGAAGAACTGAGTCATTAGAAAAGACCCTGATGCTGAGAAAGATTGAAGGCAGGAGGAGAAGGGGACGACAGAGGATGAGCTGGTTGGATGGCATCACCAACATGACTCAACGGACATGAGTTTGAGCAAATTCCAGGCACTGGTGACAAGACAAGGAAGCCTGGAGTGCTGCAGTCCTCGGGTTCACAAAGAGTTGAACATGACTGAGCAACTGAACTGACTGTAAGATTACAAATGTTTTATTTTTGTTTGTTTTTGGTGTATTATTTGTGTGAAAAGTGTTATAAACCTATTACGGTACAGTACGACATAGCCAATTGTGTTAATCGGGTATCACCAGGACTCTTGCCTGGAAAATCCC TCONS_00132042 s 3' 1561 TCONS_00132042 s 3' 1561 EMBV3_04810 TGGGTTACGAGAAGTTTTATGGTCGGTGAGTTCTAAGTGGCACAAACCACGAGCACGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32249 GCCATTCACATCCACTCTGATATGTTCTCAGTTCAAAATGGCTTGCTGACACCGACCCTA Gene GeneID:506059|ACSL6:NM_001038042:34_cdna Constitutive 0 NULL GeneID:506059 7 GENE ACSL6 MGC134527 acyl-CoA synthetase long-chain family member 6 EMBV3_08930 TTGCCAGCAATCACCTGAAGTTAGGCAGAGGCAAGTGTGGGTGGTTCTCCTACAGCATGT Gene BVV0102_041876 + 0 NULL GK000002.2:47651183-47800354 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105271 TCONS_00105273 TCONS_00105274 TCONS_00105266 TCONS_00105269 TCONS_00105272 TCONS_00105268 1 XLOC_062531 NonCoding TCONS_00105269 XLOC_062531 NonCoding NonCoding - 2:47758988-47783115 - TSS77732 2453 4 TCONS_00105269_2 79 0.234406848756625 2 0.898408356130316 5.1719039961969e-66 0.000508530225078536 0.000425090562437393 0.000372191328871412 3.85823603964417e-25 1.33638644235876e-57 1.05817127599491e-07 2.99212376387803e-28 6.23382242369323e-05 0 1.07613484877273e-84 0 2.25939266658564e-19 1.08301326237369e-27 2.15333966499656e-188 0 0 0 0.000345840252472751 9.39429455054093e-10 5.54124295122556e-35 0 0 0 3.76229483420548e-12 0.000280626621543823 0.00024118965674747 0 0 9.67914155317688e-29 XR_230315.1 LOC101903421 PREDICTED: Bos taurus uncharacterized LOC101903421 (LOC101903421), 0.0 3516 100.00 0.794129637178965 NM_173598.4 KSR2 Homo sapiens kinase suppressor of ras 2 (KSR2), mRNA. 3e-19 102 69.29 0.102323685283327 0 noncoding 1 0 1 1 -0.860821120904842 0.148782898661073 0.0204741910636527 0.736252172528278 GAGACTGTAAAGGGAGAGACTCCTGTATCTCGTCTGGAGCCAAGAAATCCAAGGAACTTAAAAAGTCAGAGAACCTGGAGATAAGGAGGCAAGGAAACTGTCGGGAGAACACTGGATCACAGTCTGGGCCAAGCCGAACCTAAATCTCCAGCGGGCAGGGGAGTCACAGGTGTGTCATGTTAAAAACACGCTCTTTTCCCAGCATGCAGCTGGGCTTGGAGGATTTCAGCACTTCCAGAATGAAATAGAAACTCCTCTCTGCAGCACGTGTGTCCCCAGCCCACGTCTGGGCTTCCTCACTGAGAACTGCCCCAGCCCTGATTCAGGAGATGCACAATGAAATGAGAGGATAAGCCTATGCCTGAGGCATCTTCACTTCAGGGGAGTGCACACAGACAGAGGCCAGCTGAGGACCTGGCAAGAGGCACTTGCAAGCCAAGGACAGATGCCGCGGGAGAAAGCAAACCGCCGGCACCTTGGTGGTGGACTTTCAGCCTCCAGAATGCTGGAGAGAGACCTGGAACCTGGTGCTCCAACCAAATGCTGTAGCTGGGACCATCCATCTTGGAGAAATGGTCCAGGCCAACTGGAAAGTATCCACAGGTGCCATGGCCACATCGAGTCCAAGGAAACAGTGCCAAGCACCCAGAGTCACAGGGGCAGCAACCAAGAAGATGGTTCCTGAGGTTCACCTTTGCCTGGCCTCTTTTCCCACTGCACCCTGGTTTGTGCCTTCTGCTTACTCGGGATGCTGCCTTGCCTTTCAGTAAGTGACTTTTCTGCTTAAGTGCCTAGAGTCACTTCCAGATCTGGACAACTGAAATCTCTGACTCAGTCAGCTGAGAATAATCATCTATTAACACCTTAGCTCTTTTATGATGTTCTGTCTTGCCAGCTATTAAGAAGCAAAAGGAACTCCAGGATAGGGACACTTTGATGGACCCTGCAGTGGACGTGAGCGGTCCAGAACTCACTTCTGTCTAGAAGTCAAGAGTATTAGTGTAAGATGCTGGGTGACTAGAGGTTGTAGAGAAACTGTCACCTCTTTTCCAAATCTGCTGAGGGATGACCCTGAAAAATAGGTCAGTGTTTCACAGTGATCTGTGCTGATTACAGCACTGCGTCTGGAAGGAGGTGATACATTTTTCCCTAGAACCCCAGATGGAGAAATGGGCTCCACCTCCCCCGCCTCTGTTTCATTCTGGGCTGGAATTCTGGTTGAAGCTCTCAGAGCAGAGATTAACAGGGTACTGTTGTGGAGTCAAGCTGCTGTGAGTTCCTGTCTGTAGGAACTGGGCGGCCTGGGCTGTGTGTGCTCCCCCATGTGGAAGAGCTCTGCTCCTCCAGGCAGTTCTGCCAGCACCACAGCTGAGGTGTCTGTCAGCCTGGTCTTAGGTCCACAGCTCAGGAAGACCAGTCTCAAAATGCCACAGCCCTGGGCTTCTCCCATGGGCTCTTTCACCTTTTAAACCAAGATGAAGCAAGAGTGTCTGCTTCCTCTGCTTCTTCTGAAGGGCAGTCAGAATACCCACTGCCCTTCTAGCCTCACACAGGAAGTTGCTTAATGAACTCAAAAATAATTAATCACAGAGAGGAGATTTCCTACATTGAGTCTGTGGTTTCCTGCCCTTCAGAACGGGCTTCCTGCCCTCCTTTCCAGCGCCTCTCACTGCCTGTGTATCATCCTGGGCTCAGATACCTGCTTTCCCTCTCCACCAACTCAATCCTTATTTTTGCCCTACTTCATCTTCCTTTTACTTTCCACTGCAAAACTTATTTTCTCCCATACCCATGTGCCCATTAATGTTTGCTTTCTGGAAATAGTTCCACTTCAAGAGAGTTTTATGGCATCCTTGGCTCTCTCTCCTGCTGAACTAGACTGAGCATACATGTATCTTTGGCCTTCACCTCACTTCTTCTAAATCTGATACTGTTAAGGGTTGAATTGTCTCTCCCTGAGGAATATGTTGAAGTCCTAATCCACGGTACCTCAAAATGGAAGATATTTGGAAATAGGGTCATTGCAGAACTAATTAGTTAAGATGAGGTTGTAATGAAGAAGGACGAGCCCCTACTTATAAGGACCCAATCCAATTTGACTAGTGTCCTTATAAGATGACAACCATGTGAAATCACAGGGAGAATGCTGTGTGACAACAAAGGCAGATGCTGGAGTCATACAGGTGTAAGCCAAGTAATAGCAAGATTGCCAGCAATCACCTGAAGTTAGGCAGAGGCAAGTGTGGGTGGTTCTCCTACAGCATGTCTGCTGACTACGTGATTTTGAACTTTCAGCCCCCAGAACTGTTGGACAATAAACATTTGTTGTTCTAAGGCATCCAGTTTGTGGCATTGTTGTGGTCGCCGTAGGAAATGAACACAAATGCTATCAGGAAGATCCCAGGGACTTGCTTCTAGAGCCTCTTCTGCCACCAACCCTGAACTTCACCAGG TCONS_00105280 TCONS_00105281 TCONS_00105282 TCONS_00105283 TCONS_00105284 TCONS_00105285 TCONS_00105286 TCONS_00105287 TCONS_00105288 TCONS_00105289 TCONS_00105290 s 3' 39419 TCONS_00105280 TCONS_00105281 TCONS_00105282 TCONS_00105283 TCONS_00105284 TCONS_00105285 TCONS_00105286 TCONS_00105287 TCONS_00105288 TCONS_00105289 TCONS_00105290 s 3' 17240 EMBV3_17610 TGCAATGGTGTCCTAGAGCCCCTCTACCTGTGCCCCTGAACACCGACTCCACTTGGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16788 GTGCCAGCACACCAACGAGCCACTGTTCAAGCTATATATGTCAAAAACAATGTTCTTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43741 CAGATTGACGCTTCCTCATTTACGATGACATTTTTTGGTCAAGGGTTCAGCCAAGGCGTC Gene GeneID:507289|SCCPDH:NM_001034288:23_cdna Constitutive 0 NULL GeneID:507289 16 GENE SCCPDH MGC127815 saccharopine dehydrogenase (putative) EMBV3_42414 TGTGTCACTCACTTCTGTGCTCTCGTTGCACCCGGATCTGGTTCCTTCCCCACTGAGGCA Gene GeneID:505839|USP20:NM_001105333:37_cdna Constitutive 0 NULL GeneID:505839 11 GENE USP20 NULL ubiquitin specific peptidase 20 EMBV3_11338 TCAGCTGCCCTCTCTCCCAACTACGATCATGTTCTTCCACTTGGCCTTTGAAGAAGAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18380 CTGTTGGATTGCATTTGGCTATGTACTGAGCAGAAGTCACCAGTCAAGGCTAAGGTGGGC Gene GeneID:508900|IST1:NM_001034335:156_cdna Constitutive 1 NULL GeneID:508900 18 GENE IST1 KIAA0174 MGC128433 KIAA0174 EMBV3_26536 CGTCCTAGACGGGTTAACTGATCACCCTAGCAGAGAAAGCTTCCATCAAAAAGGTGACCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27388 CAGACTATGAGCACTATGACTTCAGAACCCAGCCTCCTGTGGCCCTGACCACCTTCTACA Gene GeneID:282881|CD6:XM_002699258:1_cdna Constitutive 0 NULL GeneID:282881 29 GENE CD6 NULL CD6 molecule EMBV3_35466 GACCAGAATGAGAAGGAAGTATTTCAAGAATGATATGACCACCGTGCGACTACGATGGGG Gene GeneID:617596|GXYLT1:XM_002687362:49_cdna Constitutive 0 NULL GeneID:617596 5 GENE GXYLT1 GLT8D3 glucoside xylosyltransferase 1 EMBV3_36567 TTTATGGGACCTTCTCGCTTGTACCATATTTCTTCCCGCCCCGGGGACGCTCTGGGCGAA Gene GeneID:100336909|LOC100336909:XM_002697728:61_cdna Constitutive 0 NULL GeneID:100336909 24 GENE LOC100336909 NULL GATA binding protein 6-like EMBV3_41891 TTTGAAAGCTGGGGCCTGCCCTCCTAGAAAAACTACCCAGTGCCTTGGAGATGAGAAACC Gene GeneID:504598|SLPI:NM_001098865:850_cdna Constitutive 0 NULL GeneID:504598 13 GENE SLPI MATN4 MGC165770 secretory leukocyte peptidase inhibitor EMBV3_02568 GCCGACTTAGAATCGTAGACAACCACACGACAGAAAAGGCTTAGTATCTACTCCAATGGG Gene GeneID:539234|STAG1:XM_002685052:138_cdna UTR3_Alt 2 NULL GeneID:539234 1 GENE STAG1 NULL stromal antigen 1 EMBV3_01145 CTCCCAGAGCTTGCATCTGCTGAGATGAGTCTCCATGCCATCTACCTGCACCAGCTCCAT Gene GeneID:506862|ATG9B:XM_002687044:142_cdna Constitutive 0 NULL GeneID:506862 4 GENE ATG9B NULL ATG9 autophagy related 9 homolog B (S. cerevisiae) EMBV3_31372 AGTCGGCCCGCGCCCCGCTAGGGTTCAGACCCGGGGCAGGTGGTGGCGCCGCGAAGATGG Variant GeneID:528100|SERP1:NM_001114083:38_cdna 208^350 1 EMBV3_14016 GeneID:528100 1 GENE SERP1 MGC128678 stress-associated endoplasmic reticulum protein 1 EMBV3_18337 AGTGCCTTCTGTGGGGACTCCGGCTGTGCTGGGAGAAATACTTGAACTTGCCTCTTTTAC Gene GeneID:281402|PIM1:NM_174144:2_cdna Constitutive 0 NULL GeneID:281402 23 GENE PIM1 NULL pim-1 oncogene EMBV3_19136 GACAGAGGAGCCTGGCATGCTATAACCCATGGGGTCGCAAAGGATCAAGACATGAGTGAA Gene BVV0102_455239 + 0 NULL GK000010.2:47064674-47081042 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07759 ATGGGCCTTACTTTATTAGCAGCAGGAACAAGCATACCAGACACGATCGCAAGTGTGTTG Gene GeneID:781411|SLC24A5:NM_001128509:140_cdna Constitutive 0 NULL GeneID:781411 10 GENE SLC24A5 NULL solute carrier family 24, member 5 EMBV3_34936 TCCTTCTACGGAGATTACCAGAGCGAGTACTACGGGCCCGGAGGCAACTACGACTTCTTT Gene GeneID:786041|LHX1:NM_001105447:307_cdna Constitutive 0 NULL GeneID:786041 19 GENE LHX1 MGC179423 LIM homeobox 1 EMBV3_05938 TGACGAGGACATCCACCCACAGTTCAGAAGATTCCAAGATGAACCTGAATGATTTTATCA Variant GeneID:510463|WDYHV1:NM_001035091:23_cdna 407^531 1 EMBV3_28974 GeneID:510463 14 GENE WDYHV1 C14H8orf32 C8orf32 MGC127299 WDYHV motif containing 1 EMBV3_25568 CTCGGATGTTCCACCGCCCAGAGCTTGCATGCGCCCCTCCTCCCTCGGGACCTGTTGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25322 ATTGGACCCCGAGGTTCAGGAAAGACCATGAGTCTCTCAGAAGATAGAAGTGTGAAAGAA Variant GeneID:529245|ORC4L:NM_001046301:106_cdna 388^924 5 EMBV3_29771 GeneID:529245 2 GENE ORC4L MGC133948 origin recognition complex, subunit 4-like (yeast) EMBV3_19234 CTGGCAACCCGTGGTCATCGGGATCGTCCAAGGCATTAACTATTCACTAGGGCTGGAATA Gene GeneID:618126|RNF175:XM_002694312:31_cdna Constitutive 1 NULL GeneID:618126 17 GENE RNF175 NULL ring finger protein 175 EMBV3_07455 CTTCTGTCTTCCACTGAGAAAAGTCCTTCCTGTGATCATTACCTCTGGGCTGGACTACCC Gene BVT0102_060694 + 0 NULL GK000008.2:106067888-107115476 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234309 1 XLOC_143787 NonCoding TCONS_00234309 XLOC_143787 NonCoding NonCoding - 8:106858481-106858931 - TSS175813 450 1 TCONS_00234309_2 84 0.0822222222222222 1 0 0 0 4.11289076615587e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000446501903308672 0 0 0 0 0 XR_229357.1 LOC101909969 PREDICTED: Bos taurus uncharacterized LOC101909969 (LOC101909969), 5e-13 78.8 95.83 0.104444444444444 0 noncoding ACCTAGAAAAGGAAACTGAGAAGATGTGAGCATTAATAATATCAGGGGAGTTTGATATTTCAGAAATAAGCAAAGTTGGTATTTCAAGAGAAAGTTGTCACAGGGTATTATGTTAACAAGTTGGTCACAGTTTCTCCAGGAAGTGCAGCTAACTGCTTGGTCACTTAGGATGTCTCCAGAGAGGTTCTACAGGAAACCAGTACATTGCAAAGTAGTCTGTCAAAAGGAAAATGGGAAAAGGCATTTATCCACTGGCAACCTTCTGTCTTCCACTGAGAAAAGTCCTTCCTGTGATCATTACCTCTGGGTTGGACTACCCAGCCTGTCTGTGGAAACAGGCTTTGTGGGGCCTATCATAGCTTAAGCTCCCGGGGCTCTAAATATGGTGGACCCAATGGATCAGATCAGATCAGATCAGATCCGTTGCTCAGTCGTGTCCGACTCTTTTTG TCONS_00226616 . 5' 256546 TCONS_00226616 . 5' 256546 EMBV3_01518 GTAACAGCCCAATTCTACCCTTTGGGACTCAGGGAAAGTCATGGAGGTTGGAGTCTGTTC Gene BVV0102_229267 + 0 NULL GK000014.2:77298976-77383829 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02143 GTCCGCCAACTCCAGCATCTTAGTCTTCTGTGGGTCTCTCACTTTTCCTTTCTGTCCCAT Gene BVV0102_082454 - 1 EMBV3_08293 GK000025.2:2975116-2988662 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11207 CCTCCCACCCATGCATTTATCTTATTCAAATAAGCCTCAGAAGACTTGCTTTAGGGATAG Gene BVT0102_389545 - 1 EMBV3_09240 GK000011.2:16134218-16157513 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18168 CTGGCTCACCCTCCTTGTTCCAAAATAAATCTCGCTCGACCCCCGGAGCATCTTAGTTCT Gene BVV0102_269115 + 0 NULL GK000002.2:104810820-104975963 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103240 TCONS_00103242 TCONS_00103244 TCONS_00103241 TCONS_00103243 1 XLOC_062049 NonCoding TCONS_00103243 XLOC_062049 NonCoding NonCoding - 2:104887110-104892111 - TSS76694 1273 1 TCONS_00103243_2 97 0.19795758051846 3 0.746 5.02820853381735e-06 3.15641606477854e-05 1.5114566621538e-09 2.94249006363519e-35 0.000847324099917085 3.92645824317804e-05 1.26096415673869e-14 0.000278658019621705 0.000409068909441294 0 0 0 0 0.000173653839618978 0 0 0 0 0.000103056461390984 7.76311863821261e-10 8.99796705941576e-05 0 0 0 0.000255662219356802 0.000175263915805178 1.40625797482719e-57 3.54451348986439e-06 0 0 XM_865266.4 LOC533266 PREDICTED: Bos taurus free fatty acid receptor 4-like (LOC533266), 1e-52 212 89.38 0.124901806755695 0 noncoding 1 0 0 0 -0.319648072018114 0.0304825471679804 -0.0210318949322036 0.751383351206475 AGGGTGGGGGAAAGTGTAACTTTTTGAGAAAAAAAAATAAGGACTCCAGCTAAGCCGAGAGGTGACTTTGCACCCATATGGGAATCATAGTTCCCTGACCAGGAATCAGACCTGTATCCAAGGTACTGGAAGCGTGGGGTGCTAACCGCTGGACCACCAGGGAAGCCCCAGGAGCTTGCTGAGTGATGCAGCCTCAAGAAACACAGCAGCTACACGTCTTGACCGTGAAATTTCCAAGACTGTCCTTGTTCTCAACGTCCACTTCCTCCCATATGGCCATCTTCAATGTTCAGAAATCAGGGCCCGGGACCTGGGGGACATCTCCTGCCAGGGGGGACAGGGTTCCCCTTCTGCACTCGGTCAGTTTTCCCATCGATGGTATCACAAACAACTGCCCTGTGAAGACAGCAGGCAGGGTTCCGGCTCCCCGCCCTGGGTTCTTACCTGCAGCCTGGCTCACCCTCCTTGTTCCAAAATAAATCTCGCTCGACCCCCGGAGCATCTTAGTTCTGCAAACCCGTCTTCAGGAATCAGCAGACAGACAGGAACACACAGACGCGTGAAGCTTTGATAGCAGACTCCGGCACCCAACATGTTTCTGAAAGCACCGGAGTCTAATTTTCATTCCCAAAAAAGCCCCCTTGAAGACTTCTCAGCACGGATTAGGCTATCCATATTTCATGCAAAAAAAAATCAGACATAAAAAAAAAAAAACCACCCAAATGACTCTTAGTTATGAGTGGAGACATTCCAAATCGAAAGCAGCACCTTCTGGCCTCTGCCAAGGCTATGAAAATGCAATGATCTCCAGAAATTCATACACGCATCCCTGGGGACATTGTTACGGGCTCATAAAAAGAAAAGTTGCTGGTACTTGAGCTTGCAAATAATTTATGCATTGGGTTTGTCTCGGACGCCTGGAGTCCCGTGTGGCGAATTGGCCACCTACTCATACCCAGGAAACATGTCGTCGGCATCAGAATGGAGTCCTGGTGGTCTTACGCACGTGCCAGCCCCGGCGTGAAGAAACACGCTTTTTCCACGAGCCACCTTGAACATTTACAACCCAGTCATCGTGTTGGACCAAGCTGCCTCTGATCATAAAACGCTGTTGTTCAGGCTCTCACTCGTGTCCGACTCTTTGCGACCCCACTGACTGCAGCACACCAGGCCTCCCTGTCCGTCACCAGCTCCCGGAGTCCACCCAAACTCACATCCATCGAGTCGGTGATGCCATCCAACCATCTCATCCTTTGTCATCCCCTTCTCCTCC TCONS_00106075 r 5' 78437 TCONS_00106075 r 5' 78437 EMBV3_38952 CACGCAGTCCATGAGGATGCTCCAGACAAGGTAGCTGAAGCTGTTGCCACTTTCCTGATT Gene GeneID:535390|PPME1:NM_001076056:16_cdna Constitutive 0 NULL GeneID:535390 15 GENE PPME1 PME1MGC133824 protein phosphatase methylesterase 1 EMBV3_10691 AGACATAGCAACTTAGCACCAGCCCGAGTCTCCAAATGAAGTGTCCCATCTGAATGTCGC Gene BVT0102_064272 + 0 NULL GK000017.2:53971059-54003919 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19906 CCTTGACATGAATACCAGCTATGATCTTAGGATTTTATACCAAAGCAATGTCACCAAAAC Gene BVT0101_049736 - 1 EMBV3_22067 GK000007.2:43707018-43739526 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17817 CCATGTTTTCCCGCTGAATATATGCCTAGGAGTGGGATTGCTGGATCACGTGGTGGCTCT Gene BVV0102_123413 + 0 NULL GK000030.2:111882038-112114061 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248033 TCONS_00248035 TCONS_00248034 TCONS_00248032 TCONS_00248036 TCONS_00248031 TCONS_00248037 1 XLOC_151473 Coding TCONS_00248037 XLOC_151473 Coding Coding - X:112013063-112084307 - TSS185573 736 2 TCONS_00248037_3 69 0.652173913043478 3 0.989711269879146 0.000152748855419192 0.000587251504387178 0.00247452922191063 0.00146697249128316 0.00231664208838352 0.000147607682445085 1.07076653010707e-13 0.00047758620378657 0.00104058258644697 1.02699607393954e-28 0 3.86379657587694e-78 2.92850938612797e-06 2.94612565326365e-39 8.98421694897446e-52 0 0 0 1.34993109417581e-25 0.00310105967577454 7.56469735143776e-05 0 0 0 0.000548083726670697 6.12482466304983e-09 7.43116003492228e-08 0 0 0 XM_585724.4 LOC508879 PREDICTED: Bos taurus aldehyde dehydrogenase family 3 member B1-like (LOC508879), transcript variant X1, mRNA. 8e-64 248 76.37 0.485054347826087 NR_026777.1 ZNF37BP Homo sapiens zinc finger protein 37B, pseudogene (ZNF37BP), 2e-45 187 72.27 0.497282608695652 TCONS_00248037_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-19 84.0 57.97 0.971014492753623 0 noncoding CGAAGGCCCCTAGTTAAAGCCTCTTGAGATGGCGGGCGGATGAGGAGATCATCTTGCAGCTGCAGGAGAGAAACTTTACATGCTCAGCACCGTCTCACCTTTGCCAGCCTGGGTTGAATGAAGCCAAAGGACGTTCACAGTGTCCTGAGAAGCTGGGCAGTCACCCTGTTCTTCCTGTCCTGGCCGGAGGAACTTTTTCTGGCTGCGAAGTTCCTTCCTGACTCTGAACAGTGCCGGCTTGGGGTATGGGATGATACAGGCAAGCGCCCTGCACAGAGTTGGTAATCAATACACGATTGTCAAAGGAATGGAAGAAATGATAAAAGACCTTAATGGCCATCATCAAGAAGTCTACAAATAGTAAATACTGGAAAGGGTGTGGAGAAAAGGGAGCCCTCCTACATTGATAAGAATGTAAATCGGTGCCACCACTGTGGAAAACAGTTTGGAGGTTCCTTAAAAAAGTTAAAAATAGAGCTACCACGTGATCCAGCAATCCCACTCCTAGGCATATATTCAGCGGGAAAACATGGCTCAAAAGGGTATATGCACCCTGGTGTTCACTGAAGCACTCTTTACAATAACCAAGACATGGAAGCAACCTAAATGTCCATTGACAGAGGAATGGATAAAGAAGATGTGGGATGTATATTACACAGTGGAATATTACTCAGCCACAAAAAATGAAATAATGACATTTGCAGCAGCATGGATGGACCTAGAGATTATCATAGTA TCONS_00248041 TCONS_00248042 TCONS_00248043 s 3' 100527 TCONS_00248041 TCONS_00248042 TCONS_00248043 s 3' 29755 EMBV3_19648 CAACTTTGCCCTCATGCAGCAGTCCTACAGCGCCTTCAAGTATTACTCCCACTTCCTCTT Gene GeneID:618908|TUBGCP6:XM_002688001:138_cdna Constitutive 0 NULL GeneID:618908 5 GENE TUBGCP6 NULL tubulin, gamma complex associated protein 6 EMBV3_26076 CGGCTCCCAAGTCCTGAATTCTGACCCCAAGGAACAGTCTTCCCACCCGCCACCCTCTGA Gene GeneID:783017|LOC783017:XM_002685766:564_cdna Constitutive 0 NULL GeneID:783017 2 GENE LOC783017 NULL similar to Connector enhancer of kinase suppressor of ras 1 (Connector enhancer of KSR1) (hCNK1) (Connector enhancer of KSR-like) (CNK homolog protein 1) EMBV3_19892 CTGGAGCCATCCAGTGTCATCCCAATAGTGTTACTTCAACATACACCGGATTGAAGGGAA Gene BVV0102_086698 + 0 NULL GK000030.2:51246992-51539475 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244356 TCONS_00244352 TCONS_00244359 TCONS_00244353 TCONS_00244355 TCONS_00244354 TCONS_00244361 TCONS_00244357 TCONS_00244351 TCONS_00244360 TCONS_00244358 1 XLOC_150437 Coding TCONS_00244358 XLOC_150437 Coding Coding PCDH19 X:51178842-51251839 j TSS183661 6102 1 TCONS_00244358_3 288 0.0460504752540151 4 0.916461175954847 7.03204163085028e-08 0.000129207354100886 0.000505231963301832 0.000216825697168869 3.79427432285496e-08 6.70985444785137e-05 0.000435516199843671 0.000529039641387266 4.90463026756723e-05 2.55339775675518e-11 2.59352689770464e-17 6.4516136384947e-22 1.87082984320588e-05 9.97279297768493e-09 9.56967876527319e-06 3.64151507945279e-08 0 4.62662513873148e-08 0.00039701523391352 0.000192173890885676 6.55049699643087e-09 1.36354319637386e-08 2.38175054398614e-08 2.99857507570363e-08 0.000267206647477655 0.000940038775473397 1.60102495662959e-07 4.65066877757297e-10 2.31537692840413e-14 1.17209111953324e-08 XM_003584297.2 PCDH19 PREDICTED: Bos taurus protocadherin 19 (PCDH19), transcript variant 0.0 2715 100.00 0.246476565060636 NM_001105243.1 PCDH19 Homo sapiens protocadherin 19 (PCDH19), transcript variant 1, mRNA. 0.0 4235 84.70 0.616683054736152 TCONS_00244358_3 sp|Q8TAB3|PCD19_HUMAN PCD19_HUMAN Protocadherin-19; 0.0 541 93.14 0.947916666666667 0 coding 0 0 0 0 -0.0577148248275551 0.629458750713256 -0.0551886652316156 0.337967043652676 GGATGCTTATCAGCTGTTTTCCCAACTCTTTTATCTGGCAGTTGCAGACTGAAAATTATTCCTTTGACTCCAACTACGTGAACAGCCGAGCCCATTTAATCAAAAGCAGCTCCACCTTCAAGGACTTAGAGGGCAACAGCCTAAAGGATAGCGGCCATGAGGAGAGCGACCAGACTGACAGTGAACATGATATCCAGCGGAGCCTGTATTGTGACACTGCTGTCAATGATGTGCTGAACACCAGTGTGACCTCCATGGGATCTCAGATGCCTGACCATGATCAGAATGAAGGATTTCATTGCAGGGAAGAATGCCGTATTCTTGGCCACTCTGACAGGTGCTGGATGCCCCGGAACCCCATGCCCACCTGCTCCAAGTCCCCTGAGCATGTGAGGAACATCATCACACTGTCCATTGAAGCTACTGCTGCTGATGTTGAAGCTTATGATGACTGCGGCCCCACCAAGCGGACTTTTGCAACCTTTGGAAAGGATGTCAGCGACCACCCAGCTGAGGAGAGGCCCACCCTGAAAGGGAGAAGGACTGTTGATGTGACCACCTGCAGCCCCAAGGTCAACAGCGCTATCCGGGAGGCGGGCAATGGCTGTGAGGCTATTAGCCCTGTCACTTCCCCTCTGCACCTCAAGAGCCCTCTGCCTACCAAGCCTTCTGTGTCTTACACTGTTGCCCTGGCACCCCCTGCCCGTGATCTGGAGCAGTATGTCAACAATGGTCCTTCTCGTCCCTCTGAAGCTGAACCCCGTGGAGCTGATGGTGAGAAAGTCGTGCATGAGGTCAACCCCATTCTGAAGGAAGGTCGAGACAAAGAGTCTCCTGGCGTGAAGCGTCTGAAGGATATCATTCTCTAAATCAGTCTTGGGGAAGAAGAAAGAGAGAAACCATGCTGGCTAGCTAAGAAGCAGTAGCTGATCATTTAATTGTTCACCAATGGTTGGTTCTTGAGTGGCTGTATTTCAGAGCTTTCCCTAAATGTATTGTTTATAAATGACTATCAATCTGTGACAATCCCTCTCGTTTCAACAGGCAGCAGGGGTGTTCCATTGGAGCAAATTAGCTTTGGCTTGAGTCGTTCATGGGGCCTTGATGTTGGGGAAACAGAGACAAATTCAGTTGGGAAAAGTATTATGTATTAAGTGTTTGAATTTATATATTTTTCTATGTCAAAATTATAATAAAAATTACCATTGTTTGTGGAGGATTACACTTAAAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAGGCTCTGGACACCTTGAATAAGTTTGCCACTGTTTGTAGTATAGACAAGTTAACGGTCATTTATTGTGTGCTATTCATTGATTCAGTGATGTGAAATTGAGTCCTCAAATGGTTGTTTCTGAAGCTCGAGTACTTTCCAATGCCGCTACTTTGCTGTGGACACCCCTGCTTTAAAGAACACTTTTGCTAGCTGTGCTATTGTCGTATTTGATATTGCAAATTGCTACATGTGTGGTGGTGGCAAAAGGCTTATAGAAATTGGTGTTTTTTTCTTAAAAAAAAAAAAAAAACTACAGACAAAAACAAAGTGCAAACAACTGAGATGGCAAGTGAATGAGTAATGCCATATGTATAGGCTGAGTACTTGGAGGGTACTCATTCACATAGGATACCCACAGAATGGTTGCTCACCACGTTGCAGAGTATTTTTCCTGACTTTCAGGCTTTTGCCTAGATCCATGATAGATCATTACAGAAAGTCATTTTTGGATATTCTGCTATCTAATTTGCAGTTGTCAGAAATATTGTGCTGAAAATTTTATGAGATCAATTTTTCTGACTTTCAGGCCCTGAACAGGAAAGTTGCTCCTGAAGTTATCAGTTTCCAGGCTTAGAAATTCCCTATCTCCAATCATCTAAAACTCAAAAAGACTGAATCTATTTTGAATTTTAAATTAGCATTTTTTCAGACACATACTTCCTGATTCAGTGCTTCCCAAACATGATTAGAAATTAGACTGCAAAGCACGTCATGGACTGGAATTGAGAACTCCATGTGGCTCTGTATCATAGGAGTATAAATAGGAACAGAGTAAGCAGTACAAAGTGTATGTTTAGGAAAAGACAGGTAACAGGTAACAGCATCCCTAATCCAATTATCGTGCCTTCTGAATGGAGACACTTGGACATTTGAACTCGTATTTATGAGTGATACATTTTTTAAATTAAAAATGTGAACAGGAAACTATTAAAATAAAAATCCTTTAGATTTAGCCAACTCTTTGCTGTAGGCTAGGAATACACCATTTTTATTAACAAGTTTGTTACACACATTCTTTTTCTGTTTGTTTAACATTCCTCAAACTCCCCTGTTTATTAACTGTCTATTAATATTCACTAGCCAACATAGTATTCTTGCAGCCTAAGAGTTCATAATTTAAAAACAAATATGTCACCTTTGCTCTGTCTTGGTCTTAAAAGAGTTGTTTCTAGAGAAACAAGTTTTGTGGTTATGTTCTCATTTGTTTCATTTTTTGAAATTCAAGAATATGCAGAGAAAAAGGCTTAGAGCATTAAGAATGCAAAAGATGATTTATTTTCTTAAGTTAGGTAGATAAGTCCACTCTTTTAAATGTTTTAGTTATTTTTGCCTGAGTTCCTGCTTTATACATTAACTGGGGACATTTTCTTTTGTGGGAAGGAGGGTTTGAGGGAGGGGGCTGGGTAAGGAAGTGGGAATGGGGTTAGTAGGGGAGAATATTTCTGAAAAAGAAGTTATAAATGAAGCTACAAATTCATTCTTATTTCTTATTCAGTGCTGAATACTACCTCATGCAGAATATTGGTGTGACTGCAAATTTCCCCCTGAAACTGACACAATTAGAAATCAATTATCATAGCATCTTCATTTTGGCTCATTTAATTCTCTCGCTTTTTCCCCTTTAACTCATTTTATTTTAGTAGTAGATTTTGAATTAAGTATTTATTTCTGTTTGCAAGTGAATAGTTTATTTAGCATGTTAAAATTAACTTTTTTTTCCATTTAATTTATGATGGCTGCCCATAGAATTTAGACTGTTCCTCTGCTGATCCATCCAGATATTAGCTATACTGTTAGCTACCACCTCACTTTCAAGTCAGATTTGACAGCTTTTGTACAGGTGTATTTCTTATGTGCTCAGTGGGGATGAGGGAGCTGAAAAGATTGTGGCAAGTGGGAGCATTCAATGTTATGTGGCCACTGGCTGCCATGTCTCTTACCAGCCAAATTTAAAATGGTTAATGTAGAAGTGACATTGATTCTGCTTCTCTCTTGTGTTCACCCCCGCCCCCCACCCTGTTTTTTTTTTTTTTTTTTTCTTTCCAGAATTCAGTTTCAAGCAATAGACCAATCCTTTTTCCTTCTTAAAATACTTTGTTCGCAATGGGCAGTCAGATATTTTTTGGCTTCCAAATCCTTTACTGAGTATGTTCAGAGAATTTCCCTCATTAAGAAAATATCTTTTTTCCCCCTCTACAGTTGTCTGATGTATACATCCTCCCAGAAGCACAAGTGCATCCTAGGAGGGCTTTGTATGCTGGTTTTATAGTCAGGCTGTGCCTGCAAAAAGAAATTTTGTGCAAGGATCCTAACTTTCCCTTTTGGTTCATGTTTTTCTCTCCTTTCCAATATGTCTGATGAAAAGCCACAAAGGCCAGAGGGCCAAACATTCTCCCTTTTTTTCCTCTCTAAATATGTTACACACTTAAATATGAGGGATCAATTTCAGTTCCTAAATCTTAAGGAGTTCTATTCCACTTATTCTGATGTCCCTTTTGGGGAGGAATTGACGTTTTAGGTGTGTTTAGGTGTGGCATATTGAGGTATGACATGCTTTACTACTAACTGCTTTGGGCATGTCCCTGAGCCTGTGAATGGTTTCATGCAATATAAACAGGTTAGTTTGCATTGATTGATTGCTTCTCCCCAAATATGGGAACATGCTATATACATATAAGAAATAGGAAGAAGGGAGCCGTGCTGTGTGGAGTCTCTTTTTTCTTTTCTCTATACTGACTAATCTATGAACCCGTTCAGAAGGAAACTTACCATCCCTTGGATTCTCTTAAAGCCAGTAGAGTAAATTATGGCCCACTTTATTGCCCAAATAGGTAATGGGCCAAGGGACCCTGCACTTCCTGAAAGGCAGTGGTTTCAAGGTGTAGTCCTTGGACCAGCAGTACTAACATCACTTGGGAACTTGTTAGGAATGGTAATTCTCTGTCCTCACAAAGACCAACTGAAGCAGAACCTCTGGGGGTGAGACCTAGCAATTTATGTGGATCAAATGCCCACTAAAGATTGAGGACTTGGTAAAGCACAGGTTGATGGGCCCTGCACTTAGAGTCTCTGGCTCAGTAGGTCTGGAGTGAGGCCTGAGTCTTTGCTGATTTAAAAATTCCCAAGTGATGCTGATGCATCTGGTCCAGGGATCACATTTTGAGTATCACTGCTCCAGTGTAAACTTGCCTAGTAGAGCTAATTGCACCTAAGGTGTCCATTTAGACTGATAAGTTGGTGACCCATTGATCACTACTCAAAAATATTAGAGGAATACAACTTAGAACTCTGAAAACTGGAGCCATCCAGTGTCATCCCAATAGTGTTACTTCAACATACACCGGATTGAAGGGAATTCAGTTGAACTTTTCATATTGCTCTATTATATTAACAAGCAAAACGAAAGTGGTCCACTTGAAGCATCAAGGACAAAGGGCAGTTTTGGGAGACACAAGTATGTAAGAATAGCTTGACTGGGCATCCAGTGTGGGAAAAGGATCATTACTGTACATAATAGAAGTTCTGGCTGGAATTCCAATTCACTCTATGAGGATCATTTTGATGTTGAATGGTCCCCAGAGCATCCTGACAAGTCTGGTCCACTTGGCTCTTTATCCAGGGTAATAAGACCCTAACTGACTTTGAAAAACTGGCATAAATGAGCTTAAGAAGTCCATTGTATACAGTCCTAGTGTTTGCCTTCTCAGTAAAATTACATTTAAGGATGTCATTTCATGAGTCAAATTGTATCTGCTGACACTAAAGTGTATTGAGATGTTGTTCTTTAGTTTAAGTATGTAACAAAGTAATATTCAAAGGGGATGTGTGGGGGTGGGGCTGGGACTGGGTGGCTTTATATTGATAATGAAATATTCCAGAGCAAAACACATTGTCCTAATGAAGTTGTTGCAGCTCTCTTTATTTTCTTGTGAAGCTGGAATTGGCCTGTGGGTCACATGTTGTGTAAAAGTGAATTAATTTCCAATAGAACTCATATTGCTTTTTGTAAAAACAAAGAAAATCAACCACCTTGTCTGAAATATATATTGTAAGGTGCTCTTGGTAAAGAACAACCCACGAAAACCTGATCTTGATTGGAAAGCATTGTAGGTCATTAGGGAAAACTGATGATGCTGATTGTTGCTCCAGCTGTATTGGCAATTAAAAATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGCTAACACCATTACAGCACTGGTTAAGTAGATTTTTACTGGCACTGGCTGGCGTTCAGCTGAGGAAGGCTAGAACGCAGACTTTAATGACCAAGAGCCAGACTAGCTTGAGCTAGAAATTCAGCAACAAATACCTTCTTGTGCTATTTGAATGCTAAGGTATTAGTTGCAAAAGGCTTACGCCTTCGCTCCTCTAGTGAGGGGAATGAGCCTGATGACACTATTACTGTTTACCTGTCAAACCAGGGTGGAAATTTAGAGGGATGCAAGTACAGTATGTCTCATTAAGCAGTCTCTGTTGCTGACTATATGAAGGTGAAATTGTTGTATATGCTGATCTGTATGTTATGTACATTTTCACAGTGATTGAATCATTGTAAAAAGAAAAAAGACAAAAAAGAATCACCACTCTATTTTATGAAGATGATAAAGCAGCTTTATTAAATTATTACAGTTATGTTTTAAATGGTGTTATCTGCCACATTGTTTCCTTTTATCTGGTGGTTCTCTGTTTTCCCCTTAAATGTGTTTTCTCTGCTTCAAAAATATAATGCATTTTAGTATTAAAGGCTATTATGGAAAAATG EMBV3_02976 TGACCAGCCCTGAGGTGGGGCTCAGGCATCAGTATTTTTAGAAACTTCCCATGTGTATTT Gene BVT0101_013955 - 0 NULL GK000023.2:10487677-10528436 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22218 GAAACATGCGTAAAATAACTCTTCTGACAGAGTGATTCAGTAAGACCAGGCAGAAATTAA Gene GeneID:540527|EXTL2:NM_001076224:173_cdna Constitutive 2 NULL GeneID:540527 3 GENE EXTL2 NULL exostoses (multiple)-like 2 EMBV3_01164 GTCATGTCCGGAGATGGGCTGATCCACGAGGTACGAGCAGGTGACTAAGGAAGACCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11784 ACTCAGCTCTGTGTGGGGCTTGTGGTGACAGCCTGGATGGTAGGTTTTGTTCATTCCATC Gene GeneID:508468|LOC508468:XM_002695572:85_cdna Constitutive 0 NULL GeneID:508468 19 GENE LOC508468 NULL similar to olfactory receptor 462 EMBV3_26527 GGCTTGTTGGACACCAGTTTAATTCGGAAAATAGAGCAGCACTTCACCTCGCGTGTGCTG Gene BVT0102_108790 + 0 NULL GK000001.2:111658738-111829353 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001833 TCONS_00001834 1 XLOC_000448 NonCoding TCONS_00001833 XLOC_000448 NonCoding NonCoding - 1:111770863-111772481 - TSS948 1061 1 TCONS_00001833_1 110 2 0.345083487940631 5.52690150914159e-11 0 0 0.000140881002421589 6.97989423355145e-05 0.000286568687922261 0 0 0 0 0 0 0 0 0 0 0 0 9.35557570887142e-10 6.70888093943066e-09 0 0 0 0 0 0 0.000171190972284336 0 0 0 NR_038387.1 LINC00886 Homo sapiens long intergenic non-protein coding RNA 886 (LINC00886), non-coding RNA. 6e-156 554 75.76 0.751178133836004 0 noncoding 0 0 0 0 -0.132175820278431 0.329192676069693 -0.0101040870376044 0.882294299898633 CATTTCTGCTTAATTCCTGTTTGATTCATTTGGAACCAGTGCATTTTCATCAGAGCAACTAAAAAGCCCTGTGAGAATCAGCTCAGAAGAAGGAATGTACAGAGGGTCACGATAAGTAGCACATCTCATCAGACCTGATGCCCGGGGATGTTAAAGTGCTTTTTAAAATGAGGACTAATAAGGCTACTCAGCTTTTACTGTTTTCTAAGAGCCTCAACTAAATTAATCATGGCACAGAATAACCCTTCCTGTAAGGTGATTACACATCCTTTGGTTGTGGGGAAGCCTGGGCTATCACAGAGAGAAGAAGCTGAGTGAATTATTTAAAAAGTATGCAGCAAAGGCCTGTGAATCGTCGGGGAGGTGGGATGGCGTCTCTCCCTCATTCGGGGGCCTCTCCGAGGAATAGCAGAAGGGACCCCAGAAGGCTTGTTGGACACCAGTTTAATTCGGAAAATAGAGCAGCACTTCACCTCGCGTGTGCTGGGTGGGGAATTGTAAAAGAGGACACAGTCAAAATAGTCATTAAGGCCAAACCAGAGTCAGCCCAAAGCCAGGCCTGCATTCCCAGGAACCTGCTGGGCCGTGGTATTTGCATACATCAGTCTCCAGCCTCCATTGTCTCCCACAGGAAGAACTTGTTCCATTCCATTAAGAACGCCTGAATATTTTATTGGCTAAAAACTAGGGGCCTAGGCTGGATGGTAAACAAGTTTGGAGTGCTGTTTTTGAGTTGTGTTTATGTTTTATACATGGAACAGTTTTAAGTATTTTTTTGTTAAATTCAAAACACTCCAGAAATTCTGCAACTTAAGGCGACAACCACTGCAAAAGTTCCAGGGCAACATTTGGACACTTTCAAGATTACTTCAGGGACTTGAATGCTGAGAAACAAGAAGGGACAACTTTTATTAAGAAAAACATTTTAGTAGCTGAATACAGAAATCAAAACCAAGAGTAGGCGTTCCAAATTCATATTGTGAAGCGCCTACAAAAAGATTCTTCTGTCAGCTTTCACAGTGTGGAGAGTTCATCTTTTCATCTCATCAAGTGAAAATATG TCONS_00004857 TCONS_00004858 TCONS_00004859 TCONS_00004860 TCONS_00004861 TCONS_00004862 r 3' 56873 TCONS_00004857 TCONS_00004858 TCONS_00004859 TCONS_00004860 TCONS_00004861 TCONS_00004862 r 3' 58490 EMBV3_01388 AGATGCTGGCAGAGAGAGAGGAGGCTCTGGCAAGGGGCCGGGTCTGGGCCTGAGGAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42803 AAATCCAGCCTAGGAGTGCTGACTTCTTGTGCCTGAACCTGGTGGGCAAGGTTTTGTGGT Gene GeneID:282346|SCARB1:NM_174597:21_cdna Constitutive 0 NULL GeneID:282346 17 GENE SCARB1 CD36L1 scavenger receptor class B, member 1 EMBV3_29199 ACATCCGCACAAAGGAGCAGATCGTGGAGATGCTAGTGCAAGAGCAGCTGCTCGCCATCT Gene GeneID:513983|SCAND1:NM_001079591:1039_cdna Constitutive 2 NULL GeneID:513983 13 GENE SCAND1 NULL SCAN domain containing 1 EMBV3_28729 ATGGTCCAGGTCCTCACTCAAATAACAGCTCCAAGACGATGTGGGAACACGGACGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_38266 TGGCCCCACCAGGCTCCTTCCTGGAGGTTAGATACAGACTGACACAGATAAAGCCTTCAA Gene GeneID:505256|SNX20:NM_001038033:120_cdna Constitutive 0 NULL GeneID:505256 18 GENE SNX20 MGC133803 SLIC1 sorting nexin 20 EMBV3_15462 ATCTTCTCAGGACCATCTACACTGCTTCTGAAGCAAATCACTTCCCTTCTTGAGTGGGAG Gene BVT0102_409109 + 0 NULL GK000004.2:25051058-25057919 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43296 GATGTACAATCTGATGCTGCAGTGCTGGAAGCAGGAACCAGACAAGAGGCCAGTGTTTGC Gene GeneID:515924|RET:XM_002698828:66_cdna Constitutive 0 NULL GeneID:515924 28 GENE RET NULL ret proto-oncogene EMBV3_13630 CCAGTCCCAGACTTTGTGAAGATACCATTCAGGTAGGGATGACAGACAATGGCCACGGTT Gene BVV0102_096777 - 0 NULL GK000022.2:43259934-43354326 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37928 CGCTGTCTTTCTGGAGCAGACTCTCTCCAGTGCTCAGGTGCTACTGATTGCTCAAGAGAA Variant GeneID:525059|GSS:NM_001015630:1153_cdna 358^690 2 EMBV3_40761 GeneID:525059 13 GENE GSS MGC134298 PRNP glutathione synthetase EMBV3_17612 TCACTGAGAATGCAGCTTTCATTGGTCACGTCACCTCTTAACCGTCCCCCAGAGAGGGGA Gene GeneID:100296876|LOC100296876:XM_002686550:813_cdna Constitutive 0 NULL GeneID:100296876 3 GENE LOC100296876 NULL hypothetical protein LOC100296876 EMBV3_19018 ATGGCCTATGACCGTTGTGTAGCCATCTGCAAGCCACTCCATTACTCCAGCATCATGAAC Gene GeneID:781758|LOC781758:XM_002690701:336_cdna Constitutive 0 NULL GeneID:781758 10 GENE LOC781758 NULL similar to olfactory receptor Olr753 EMBV3_00096 CACGTTGGCAAGAATTGTGTGATTGGGCGCCGGTGTGTGCTGAAAGACTGTTGCAAAATT Gene GeneID:506441|DCTN5:NM_001024484:329_cdna UTR3_Alt 3 NULL GeneID:506441 25 GENE DCTN5 MGC3248 dynactin 5 (p25) EMBV3_18459 CTACCGCTCCTCAGCCGGAAGCAGACCCTGAGGTGAACACAGAAACACTAACTAAGTCAT Gene GeneID:506031|ZMYND8:XM_002692489:587_cdna UTR3_Alt 2 NULL GeneID:506031 13 GENE ZMYND8 NULL zinc finger, MYND-type containing 8 EMBV3_40431 AAACATCGAATTATGGACTTGCTGACCTATCTTACCAGCGCCCTCCTCTTTTTCCGGCCG Gene GeneID:100296545|LOC100296545:XM_002686764:63_cdna Constitutive 0 NULL GeneID:100296545 4 GENE LOC100296545 NULL hypothetical protein LOC100296545 EMBV3_41375 TTAAAGCTCAGTTATTCTGTTGCAAGGCAGGGGTGCCTGACGCTTCTGCTGCTAATACCC Gene GeneID:539011|BRS3:XM_002699588:80_cdna Constitutive 0 NULL GeneID:539011 X GENE BRS3 NULL bombesin-like receptor 3 EMBV3_37258 CAAACTGAAATCTTGCTTTATTTTCTGATCATGAAATCGATTGTGAAGCTTTCTGACAAC Gene GeneID:515749|CTNNAL1:XM_002689910:19_cdna Constitutive 2 NULL GeneID:515749 8 GENE CTNNAL1 NULL catenin (cadherin-associated protein), alpha-like 1 EMBV3_21272 CAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACCAAGGCCCAGAAGAAG Gene GeneID:616353|LOC616353:XM_002693025:272_cdna Constitutive 0 NULL GeneID:616353 15 GENE LOC616353 NULL similar to histone cluster 1, H2bd EMBV3_00159 ACACCAGGCTTCCCTGTGCATCACCAAATGCGGGAGCTTGCCCAGACTCAGGTTCATTGA Gene BVT0102_242501 + 0 NULL GK000007.2:24521787-25005030 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31817 TGGAGAAGGAGTTGGACCAGTCAACATCTCTGTCGTCACAAACACCGTTTCCTCAGGCTA Gene GeneID:281268|KRT5:NM_001008663:151_cdna Constitutive 0 NULL GeneID:281268 5 GENE KRT5 NULL keratin 5 EMBV3_09384 CAACTATTTGGTGCCTATTCTTTGGCTTAATGAGACTGCCACTATTGCTGACGAGAAGGC Gene GeneID:518526|MGC137452:NM_001046239:14_cdna Constitutive 0 NULL GeneID:518526 4 GENE MGC137452 NULL CD36 antigen like EMBV3_31969 AAGCCTCTTTCTCCCTCGGAGCCTGTTGATTTATCTGGGAGGAGGACCTAGCCACGTGAT Gene GeneID:100298629|LOC100298629:XM_002689166:198_cdna Constitutive 0 NULL GeneID:100298629 7 GENE LOC100298629 NULL hypothetical protein LOC100298629 EMBV3_03967 GGCTTTGGAGACATCCGTGGTCCTGCTTCAGTGGTACCAGCCCATGAACAAGTTCCTGCT Gene GeneID:522002|MAP4K1:NM_001075825:640_cdna Constitutive 0 NULL GeneID:522002 18 GENE MAP4K1 NULL mitogen-activated protein kinase kinase kinase kinase 1 EMBV3_41726 CAGGCCCAGTTAGAGACAGTAGCATGACTGAGCTACACAAACCTACATCAGTCTTTGCTG Gene GeneID:616916|REEP1:NM_001082461:152_cdna Constitutive 0 NULL GeneID:616916 11 GENE REEP1 MGC148652 receptor accessory protein 1 EMBV3_07394 GGGAATGGCGGGGGTGTCATCGACCTCAACGCCTTGGTGACCAAGGACAGCGTGGCAGAC Variant GeneID:404123|FAHD2A:NM_205790:23_cdna 337^825 1 EMBV3_02013 GeneID:404123 11 GENE FAHD2A FAHD2 MGC137571 fumarylacetoacetate hydrolase domain containing 2A EMBV3_21836 AACGTCAAGTTCATCCTAACTGAGTCTGACACGGTCAAGCGCCGGCCCAAGGTCAAGGAG Gene GeneID:614560|CASKIN1:XM_002697860:362_cdna Constitutive 0 NULL GeneID:614560 25 GENE CASKIN1 NULL CASK interacting protein 1 EMBV3_30242 TCCCAGAGAAACTGCTAGGGAGATTGTGCGCTCTTGCTTACACTGCCCCACTGTTCATAA Gene BVV0102_233945 + 0 NULL GK000013.2:74238521-74258014 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037838 TCONS_00176448 TCONS_00161585 TCONS_00140801 TCONS_00050101 TCONS_00151324 TCONS_00050092 TCONS_00254912 8 XLOC_021667 XLOC_106226 XLOC_098473 XLOC_085230 XLOC_030230 XLOC_092086 XLOC_030221 XLOC_157844 Coding TCONS_00161585 XLOC_098473 Coding Coding - 28:14553620-14554853 - TSS120917 1233 1 TCONS_00161585_3 139 0.613138686131387 1 0 5.51731174365436e-06 0 0 2.85723997632729e-06 0 0 3.94141503793638e-07 3.99751741200216e-07 7.67895992419688e-05 0.000349145143739659 0.000239928807308418 0.000691910998855595 1.18514491994542e-05 0.000105059143286254 5.81926836101267e-05 0.0759954288179233 0.03070512860428 0.0751165843054059 1.02746457230718e-05 0 3.81034029255056e-07 0.0215988838099342 0.0215660356833393 0.056272387056311 0 0 0 0.00147911807801157 0.000998164452605897 0.00401107027876553 TCONS_00161585_3 sp|Q9QC07|POK7_HUMAN POK7_HUMAN HERV-K_1q23.3 provirus ancestral Pol protein; 4e-14 70.9 41.57 0.633093525179856 1 noncoding 0 0 0 0 -0.131695253132884 0.405120656829164 0.0023227394489102 0.960193471725978 TGATATTAATTGGTATGCTTTGATGTGCTGTGATGATATATGTTCTATATACTGTATAATTGTATGTGTGTGACATGTATTATTGCAGTACATTGGTTTGTGTTGGCTGGTATTAGCTGTGTACGTGTTGTATTGCTGTAATATATATTAATTAACATATTAATTATAAAGATTAATTCAAGTATATTGATTATGTCAATAAGTTTATACTTGTTGCCATGTATAAATACATATATAAATACATTTTGCATTTAGATATATCTGTATACCAAAATGAGATAAGGAGATTATGCATTTATTATTTAAATTTATATAGAGACTTAAACTAAACATTAGACCTAAATTAACATATCCCAAAATTTATGCTGTTAAAATGTAAATTTTAAAAATTTTAAAAATTAAATTGACAACTGCTTGACAATTCTTTTACCATAAAACCCCCATAGGTGTAATTGTGGTAGCCAGACAAAAAATTGGTTTTATAGCAAAACGGCCCCCTAGAGTGGGTCCATCTTCCCGCTCAAACTAAAAATGTAGTGGCTTCTTATCCAGGATTGATAGCTACGTTGATATTAAAAGGAAAAAAGTGGAGCATTGAATTATTTGGTTAAAGAGCCATCAGAAATTGTAATTCCATATAATGAGGAACAACTTGGTGCTCTTCTAATGTTTGACAATCTCCTATTCCAAATGCTCAAATAGTTTTTACTGATGGGTCAGCAGACGGTAAAGCCTCCATAGTTACTAAAAATCACCAAAAGGTTTTAGAAACATGGGAAACTTCAAACAGCATAGAGGCTTTTGCTATGTTTGCAGATGAAGAATTTAACCTTTATTCTGATTCTCAGTATATTGTCAGGTTGTTTCCACACATTGAAACTGTGGTTTTTGTCTAAAAATAAAACTACCATATTTCATTTGTTAACTAAATTACAGCAACAAATTTGGAAAAGAAATAAAATATTTTTCATTGGACACATTCGGGCTCATTCCGGATTGCCTGGCCCTTTAAATGCCTTTAATGACTTGGCTGACTTGTTAACCAGAAATGCAGTGGCTACTGTGATTGAGGAGGCCAGAGCCTCTCACTCACTTCATCATCAATATGCTACTGCCTTAAGATATCAATTCCAAATTCCCAGAGAAACTGCTAGGGAGATTGTGCGCTCTTGCTTACACTGCCCCACTGTTTATAATATAGTCTACCTACGGGAGTTAATCCTCATGGTCTCA TCONS_00159107 . 3' 81769 TCONS_00159107 . 3' 83001 EMBV3_38677 TTGCCTATGAGCCTGGGCTGAGTCTGAGAAACAAGTGTGACCGAGAGCATGAACAGAAGC Gene GeneID:535072|ANAPC7:XM_002694577:639_cdna Constitutive 0 NULL GeneID:535072 17 GENE ANAPC7 NULL anaphase promoting complex subunit 7 EMBV3_08390 CTCGAGGCCGACTCAAAAAGGCTTGTGAACGCACATGAAATATGCTAGAAGCTGCTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24844 GAAGCCAGGCAGCAGGAGGAAGAGCAGCAGAAGGAGGAGTTGGCCAGACTACGAAAAGAA Gene GeneID:507226|TPX2:NM_001098898:916_cdna Constitutive 1 NULL GeneID:507226 13 GENE TPX2 MGC152526 TPX2, microtubule-associated, homolog (Xenopus laevis) EMBV3_13227 CAGAGTATAGTGCTGGCTGTTGCGGTGGAAGAGGATCTCAAACATCTTGCTGGTGCAGGC Gene GeneID:100337344|LOC100337344:XM_002693017:245_cdna Constitutive 0 NULL GeneID:100337344 15 GENE LOC100337344 NULL hypothetical protein LOC100337344 EMBV3_25564 TGTTACAGTGGCTTTTGAAGGGTCTGTGGATGATAAAGGGCAGCGGAAGGAAGCACCATC Gene GeneID:530414|AGPAT5:NM_001075932:8_cdna UTR3_Alt 3 NULL GeneID:530414 27 GENE AGPAT5 MGC142713 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) EMBV3_19410 AAGCGGTCCTCTTCCGAGGAGTCGGAAAACGCTGAGAAGTGGAACAAGACGTCGTCGAAG Gene GeneID:514862|GSC:XM_002696827:621_cdna Constitutive 0 NULL GeneID:514862 21 GENE GSC NULL goosecoid homeobox EMBV3_18165 GGAAACTTAGGCATCCTGTGTTCATGCCGTGAATGTTTATTCCTGACTTGAAACCTCTAG Gene GeneID:524166|RNF144B:NM_001099028:104_cdna UTR3_Alt 2 NULL GeneID:524166 23 GENE RNF144B MGC157214 ring finger protein 144B EMBV3_36895 CAAAGGGTCTCTCTACTCACTCCCTTCATATTGGCAATGGCTTCGAAAGACCAAGCTCCG Gene GeneID:614631|TMEM95:XM_002695800:369_cdna Constitutive 0 NULL GeneID:614631 19 GENE TMEM95 NULL transmembrane protein 95 EMBV3_41114 CCGCCGGCCCCCAGCGCCAGCCAGAGAGGAAAATTTATTGGAGGAAGTTTACTGGAGTAA Gene GeneID:100337241|LOC100337241:XM_002685273:97_cdna Constitutive 1 NULL GeneID:100337241 2 GENE LOC100337241 NULL hypothetical protein LOC100337241 EMBV3_12161 CAAGACGCTAGTCCTGCTGATGGGCAAAGAAGGTGTCCACGGCGGTATGATCAACAAGAA Gene GeneID:513895|PFN1:NM_001015592:99_cdna Constitutive 0 NULL GeneID:513895 19 GENE PFN1 NULL profilin 1 EMBV3_21280 GAAGAAGGAATACATGATAAAGTAACAGTTTGATTTCTCTTTTATTGTACACTGCTTCTG Gene GeneID:510201|STRAP:NM_001015567:32_cdna Constitutive 3 NULL GeneID:510201 5 GENE STRAP NULL serine/threonine kinase receptor associated protein EMBV3_04397 TTTTTGAGAACCGAAGTTTTGAGTTCCGAAGAGCCCAAGATGGAGACAGGTTCTGGGGGC Gene GeneID:788751|EPX:XM_002695595:148_cdna Constitutive 0 NULL GeneID:788751 19 GENE EPX NULL eosinophil peroxidase EMBV3_07959 CTCCTAGCTCCTGTCTCCCTGATCCTGGCCACCTACAGGAATATGATCTCCTCTGTGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40419 CTTGGGCAAGTGGCTTAACCTCTCTGAGTCCCAGTCTCTGAAGAGAAACAGTCATGGTCA Gene GeneID:509101|TMEM125:NM_001046023:110_cdna Constitutive 0 NULL GeneID:509101 3 GENE TMEM125 MGC138129 transmembrane protein 125 EMBV3_17619 CAGCCCCGGCCATCAGCACGCTGTCTGTTGTGTGTTTTTCTAGGACAGGATGATCCATTT Gene GeneID:768244|XRCC3:NM_001078117:336_cdna Constitutive 0 NULL GeneID:768244 21 GENE XRCC3 MGC142843 X-ray repair complementing defective repair in Chinese hamster cells 3 EMBV3_21491 CCTGGCCATGACTGGTGCCATCCGTAAAAGGCAAATACAGCTCAGAGATCAGGCCTACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07268 GGCGATGTATCCTGACTACTTTGCTAAGAGAGAGCAATGGAAGAAACTGCGGAGGGAGAG Gene GeneID:327660|NDUFB9:NM_175783:11_cdna Constitutive 1 NULL GeneID:327660 14 GENE NDUFB9 B22 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa EMBV3_32653 TACGGTGCCGCCGGCGGGAGCGGGAGGCAGATCCAGGAGTTCCTGCGGTTGGCCCAGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36682 GTCAGAGATCCACTCCCACCAGGAGAAGTACCTGCGGTTCACATACTCACAGAAGTACCT Gene GeneID:785686|LOC785686:XM_002707781:125_cdna Constitutive 0 NULL GeneID:785686 22 GENE LOC785686 NULL hypothetical LOC785686 EMBV3_22384 TAACGGAGTTAAACGTACAGAAGGGGCAGGTATGGGGTAAGATGGCTTGTCTGCACCTCC Gene GeneID:338472|GABARAPL1:NM_001033616:19_cdna Constitutive 0 NULL GeneID:338472 5 GENE GABARAPL1 MGC128701 GABA(A) receptor-associated protein like 1 EMBV3_38391 GTGCAGTGGAGGAGTATTTCTTCCGCAATGGTGAGCCAGCAGCTGCAGACCATGTTCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17335 TATTATACCACCTCTTCTTCTGTCTCTTGGAAGGCAGACAATGGGCAGGCTCCAGGGCCC Gene GeneID:540756|NGEF:NM_001076926:32_cdna Constitutive 0 NULL GeneID:540756 3 GENE NGEF MGC143001 neuronal guanine nucleotide exchange factor EMBV3_21665 GCAGCTGGTCTCCTCACAGCAGGGCCCCAAGACTTCCAGTGTCCCAACCTGGTATGAACT Variant GeneID:614564|ZNF79:XM_002691625:302_cdna 444^570 1 EMBV3_10290 GeneID:614564 11 GENE ZNF79 NULL zinc finger protein 79 EMBV3_31496 TTTAACCAGGACCTCACCCTACCGGCTGGCATCTCTTACTGCCTCCAAACACCACCCAGA Gene GeneID:281210|GPX3:NM_174077:13_cdna Constitutive 1 NULL GeneID:281210 7 GENE GPX3 NULL glutathione peroxidase 3 (plasma) EMBV3_07101 GGCTTTGCCTTCTTCGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATC Gene GeneID:100299135|LOC100299135:XM_002700376:28_cdna Constitutive 0 NULL GeneID:100299135 X GENE LOC100299135 NULL similar to latrophilin 1 EMBV3_21356 TCTTGTGTTTGCAGAAATGTGGGACAGAAGCACGAAGACCCAGCAGAGGGACTGACTCCC Gene BVV0102_322074 + 0 NULL GK000026.2:43288959-43749414 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42961 CACGTGTCGGTCTATGGGAGCGTGTACGCCATTGCCGATGTTGCGTTTTGTATGGGATAT Gene GeneID:282471|SLC18A2:NM_174653:15_cdna UTR3_Alt 2 NULL GeneID:282471 26 GENE SLC18A2 NULL solute carrier family 18 (vesicular monoamine), member 2 EMBV3_30052 AGCACAAAATAGTACTTTGTGGATGATTTCAAGATATAAGAGATTTTTGGAAACTCCACC Gene GeneID:281335|MYF5:NM_174116:18_cdna Constitutive 0 NULL GeneID:281335 5 GENE MYF5 NULL myogenic factor 5 EMBV3_13014 GCAGTGAAAACCCAAAGACAGAAATCTCAGGTGAAGAGAACTGGTCTTGTGGTGGTGAAA Variant GeneID:512184|CDADC1:XM_002691785:396_cdna 292^366 1 EMBV3_30903 GeneID:512184 12 GENE CDADC1 NULL cytidine and dCMP deaminase domain containing 1 EMBV3_13261 GGTGCAGCGGCAGGCCCAGGAGGGCAAGAAATTCAAGAACCTGGCACGCCAGCACCAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37328 TAGAACCCATGCTCTGCAACAAGAGAGGCCACCACAGTGAGAAACCTGCACACCACAACT Gene BVV0101_035979 + 0 NULL GK000007.2:21294173-21307818 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34623 CCCCTGTGATCCAAATAGTTGCACAACCACCCAAAATGGCCCTCACTGGGACAGACACAA Gene GeneID:518911|LOC518911:XM_002699909:177_cdna Constitutive 0 NULL GeneID:518911 X GENE LOC518911 NULL similar to Sodium/hydrogen exchanger 2 (Na(+)/H(+) exchanger 2) (NHE-2) (Solute carrier family 9 member 2) (H7) EMBV3_33373 CAGTCCTTGAATTCTAGAACTATGGCCCACATTTGGAATCACCATATGAGACCAAGAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36714 GCGAGGGACTCCCGGAGTCTGGCACCGCAGTACAAACACCTGAAATATAAAAGTGAGCCT Variant GeneID:509253|MGC152190:NM_001075398:8_cdna 268^446 2 EMBV3_38208 GeneID:509253 4 GENE MGC152190 NULL hypothetical LOC509253 EMBV3_31401 AGTGGGAAGAAGCACGACTCTGAGGCCATGACCCCCCAGGCAATGGGAGGACCAAACGAT Gene GeneID:785804|MGC152344:NM_001099197:231_cdna Constitutive 0 NULL GeneID:785804 5 GENE MGC152344 NULL hypothetical protein LOC785804 EMBV3_04186 GTTTCTACAGGTGCTTTCCTGTTCATTATTCAAATCCATACAAATACCTGCTTCAGCAGC Gene BVV0102_061594 + 0 NULL GK000010.2:4114654-4181150 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12755 TTAGCCTAGAGGTGGTCAGATGCATTAGCCCTGAAGAGGGAGTGTCCACCACATGGCCTG Gene GeneID:527488|SNTA1:NM_001075898:1168_cdna Constitutive 0 NULL GeneID:527488 13 GENE SNTA1 MGC142519 syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component) EMBV3_10486 AGGGTTTACCACAAATTTTTGTTTGAGGTTCAAGACACGCGTAGGACCTCGTTTCCTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31951 GATGGACCTGCAGCACAAGAGCTTATTCCTTCAGACACCAAAAATCGTGGCAGACAAAGC Gene GeneID:100295969|LOC100295969:XM_002694064:183_cdna Constitutive 0 NULL GeneID:100295969 16 GENE LOC100295969 NULL similar to L-lactate dehydrogenase B EMBV3_32551 TCACCCTGAAGAAGGGGGAGTGTCCCAGGAAGCAGATGGATCCCAATAAAGTGGTGGTGA Gene GeneID:536481|MDGA1:XM_002697209:102_cdna Constitutive 0 NULL GeneID:536481 23 GENE MDGA1 NULL MAM domain containing glycosylphosphatidylinositol anchor 1 EMBV3_21588 CCCCCACAACCCTTTCATCAAAAGTCCCCCTGCTCCCAAGACACCACACAAATGTGGCTT Gene GeneID:281860|IL1RN:NM_174357:17_cdna UTR3_Alt 1 NULL GeneID:281860 11 GENE IL1RN NULL interleukin 1 receptor antagonist EMBV3_06432 AACTAACAGACCGAAAAAATCCAGAATCAGGCGGTGGTTATCATGGGCGTGGTGCTGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19274 TATACAACAGAACCAGCCCACTTCCCCCAGGGTAAAATCCAGTACCATGAACATGTCACT Variant GeneID:513177|PTGR1:NM_001035281:5_cdna 799^917 2 EMBV3_11304 GeneID:513177 8 GENE PTGR1 LTB4DH MGC127457 prostaglandin reductase 1 EMBV3_22815 TACCAGTGAAGCCATCTAGTTCTGGTATTTTTTTGCTGGGAGGTTTTTGAGAACTGATTC Gene BVT0102_213299 + 0 NULL GK000006.2:38323304-38464823 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203026 TCONS_00203020 TCONS_00203021 1 XLOC_124082 Coding TCONS_00203021 XLOC_124082 NonCoding Coding - 6:38389875-38392933 - TSS152180 2941 1 TCONS_00203021_4 109 0.440326419585175 2 0.0385999345763821 0.000516256593059123 0.000277948269115735 0.000935403600134069 0.000372250112147221 0.000536395547271539 0.000146966147831178 0.00124280424277773 0.000466802091622826 0.00164231048368851 0.00013653250320551 3.28793279514803e-09 2.54035921276144e-09 0.000272979805527264 0.000327067315174992 0.000625679156451009 0 0 0 0.000593068084384914 0.000395823460902217 8.68965907283789e-13 0 0 0 0.000645118645570866 0.00088770999241898 0.000490727780449258 8.57061760683058e-68 4.46865291679527e-146 1.10350840521773e-42 NM_001105444.1 DUPD1 Bos taurus dual specificity phosphatase and pro isomerase domain containing 1 (DUPD1), mRNA. 1e-36 159 74.03 0.0843250595035702 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 1e-18 100 70.87 0.0734444066643999 0 noncoding 0 0 0 0 0.0751482415636869 0.646866078765085 0.0120055041766433 0.798997127571321 GGGTGAGAGTTGCTTCCAGTCTTCAGTCCTTTTCTGTTTGGGGAGGCATCGATGTTTGCTCTACATAGGATGAGACGGGCAGGGCAGTGTAGCCCGCTTACTCTACGCTGTAGCAGTCTGGGGGCATCTGTGTGAGGGGAGAGCACGTGCAGACAGGAAAGAAAAACCTCACAGTTTTTTCTGTGAGAAAAAAACCTCCAGAAATGAGCTCCATGCAGGAGCTCATTGTTCCTGAATCTCTCTTTTTTCAAAAAGTCGGCGTTTCTGGGTTCTTTTGCCTGTGGGTGCGGTGGGAACAGATGCAGAAGCTGTGCAGATGCCATTGAAGTCATTCTCAAGATACTAATGTGGTTCTCAGCATGACATCGATGAGAAAACAACGCAGAGCGGGAAGAAAAGGAGAAAACGACAGCTTCTCGGGTGAATGTCCTGTCCTGGGTCAGAGGCTGCGTCTGCTTTTCCTCCTGAAATGTCATGGATTGAGAACCTAGTCTTTCCCCATTATCTGCTTCCAGGCTCCCCACAGAGCATGGAGCATTCTCACCATGAAGTAGTGACCTTCAACTATCGAAATTATTCCTTTTGTGAAAGAGCAACACGAGAAGGCATTAATATCCAAAATTCCCTATGGGATAATTTCAGATGTTGAGATACTAGTGAAGAAGGGAAAGTGGAATGGCTACTGTACATCTGAATGCGATGTCAACTTACCACAACAGGATTAAGAAAATGCACTTTTAAATGGGATGGTATTAGTGGTCCAGATAAATCAAATTTCTGGGAAAGAAAAGTAATTAGGAGGTATTTTTCTCTGTATATTGATAAGAAAGATTATTTAAATACAGTATTAGAATCAGAGAACATAGGAGGTGTATGGAGACTGAAATTTGTAAAACTGACATTTTTTTTCATGGTAGTTTCAGATTATGATTTTCTTCTGTATTTTCACCCAGAATACCACAGCAGTGACAATGTGTCTTGTGTCCTTCAGTCCTGTGATTATCATTTGTCCTATTATACCTGAGGTTCACTGGTTCAGGTGCGTTCTGCAAGATTCCTTTGCTATGAAGTTCGTACATTTTACCCTTGGTAAAGGTTTGGTGTGATTCACTGAGAAATGTGCATAAACCATCATGATAAATCTGGAAACTCCAATTTTTTCCCCTAGTTTTCTTTTGCCTCTAGTTTTCTTTGGAAAATGAACACCTTCACATTTGTTTAATAAAGATACTAGCTTTTCAAGTTGTAATCAGTCAAGACTTGCTCTTGTAAGTTTCTATTATACTCTACACTAATGCAACAGACATACTCTGCTTTATCACTTCTTCATATTTTCAAGAGTTTATAAGAATCATATTATTAATGTATGCTCAGTTGTATTGTTTCTGAAATATAGCTCAAGTCAAATGGTAAATAATTTCAGAGATATCAGATTCAGAACCAATAGCTCTAGCTTATTTTATATCATTCTGTTTCTATATTTATAAAATGTAAAGTGTATCATCCAAAAAATTACAAGATTTATCCAATTTAAATAAATAGTATTCTTCTTTTAAAATTTGGTAGAATTTACCAGTGAAGCCATCTAGTTCTGGTATTTTTTTGCTGGGAGGTTTTTGAGAACTGATTCAATCTCCTTAATAACTTGGTCTGCTTAGATTGTTTTAAATATTTTCTTCATGACTCAGTTTTTTACTTTTATTTTTTAATTTTTTCTTTGGCTCATTGATTATTTAGAAATTGTGTTGCTTAATTTCCACATACTTGTAAAATTTCCAGACTCTGTTCTCTTGTTCATTTCTGGTTTCTTACCATTGTGATTAAAACAATACTTAGTAATAAGTGGTGTAAATAGAAAGAGAAAGACAAATAACTTACATTATCACTTTGTGCAGAATCTAAAACATGACACAAATTAACCTCAAATGAACCTATCTATGAAACAGAAACAGAATAGCAGACAGAGAGAACTGACTGGTGGTTGTCAAGGGGGAGGGGTTGAGGGAGGGATGGAGTGGGAGGCTGGGGTTAGCAGATGTAAGATTCTATATATGAAATGGATAAACAGCAAGGTCAAGCTGTAGACCACAGGGAACTATATTCAATATGCAGTGATAGGAGCTTCCCTGGTGCAGTGACTAAGACTCCATGCCCCCAATGCAGGGGGCCTGTGTCTAATACCTGGTGTGAGCACTAGATCCTACCTGCTGCAACTGAGAGTTCATGTGCCACAGCTAAAGATTCAACATGCCACAACCAGACCCAGCACACTAAATAAATAAAAATAGACACTTTTTCAAAATCCCATGATAAACCATAATAGAAAAGAATATTAAAAAAAGAATGTGTGTGTATATATATGTGTGTGTAACTGAATCCCTAAAAATACTTAGTATGATATCAGTCTTCTTAAATTTGCTGAGATTTGTATAGTGACCCATAATATAACCTGTCCTGGATAATGTTCAGTGGGCAGTTGAGAAGAATATGTATTCTGCTGCTATTGGATGGACTGTTCTGTTTTTGTCTGTTAAGCCCATCTGGTGTAATTCAAGTTCAGTACTCCCTTACTGATTTTCTTTCTGGATGGTCTATTTATTGTTGAAAGTCAAGTATTAAAGATTGCTACACTTATTTTTTTTTTCTATTGTCTATTTTTCTATTCAAATCTGTTAGCATTTGCTTAACACTTTAAGGTCTTCCACTGTTGGTACATATTTATTTACGATTGTCTTCTTGATGAATTGACAATATTATCATTATATAATGACCTTATTTTTTTTCTTGTTGCAGCTTTTGTCTTAAAATCTGTTTTGTCTGACCTAGCCACCACTGCTTTCTTTTGGTTTCCATGTGTTTGGAATATTTTGTTCTAAAGCTTCACTTTGAGCCTATTTGTGTTTTTAACACTGAAGTGAGTCTGAAAGGCAGAGTGTAGTTT TCONS_00204963 r 5' 66361 TCONS_00204963 r 5' 66361 EMBV3_42163 AATGTCTGTCTTTAGTCCAGCCAGCAGGAAGCTATTGCTTTCCTGGCAAGGAAATGGCAC Gene GeneID:504352|CEP70:XR_084724:130_cdna Constitutive 0 NULL GeneID:504352 1 PSEUDO CEP70 NULL similar to centrosomal protein 70 kDa EMBV3_03513 AAGAAGGATGCTGTTGTACCTTCTGGAGGCTTCTTCCCCACCATTGGGATGCTGAGCTGT Gene GeneID:534570|SPRYD3:XM_002687242:66_cdna Constitutive 0 NULL GeneID:534570 5 GENE SPRYD3 NULL SPRY domain containing 3 EMBV3_20672 AGAAGGAGCGGATTTCCAAAGCCTTTGCAGCCCAGTTTGAAGGATCTGAGAAGAGCTGCC Variant GeneID:512726|SHF:XM_002690907:180_cdna 572^712 1 EMBV3_39233 GeneID:512726 10 GENE SHF NULL Src homology 2 domain containing F EMBV3_40529 CCACTGTCCCCACCTCTCTAAGTGCCCTAGCCACCTATGGCTGATATGTCACAGAAGAAA Gene GeneID:537690|EXOC4:NM_001102207:21_cdna UTR3_Alt 2 NULL GeneID:537690 4 GENE EXOC4 MGC160074 exocyst complex component 4 EMBV3_14575 AAATCGAGTCCTCAAGGAGTACAAAGATGTGGGCCTGTGGCAAAAGAACTGAGTGGCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00018 TACACGGACGGCGGTTTCATGGCGACGGCCTACCTTTGGGCTTGGAGACGGCGTTCTTTT Gene GeneID:100335975|LOC100335975:XM_002683675:2_cdna Constitutive 0 NULL GeneID:100335975 8 GENE LOC100335975 NULL hypothetical protein LOC100335975 EMBV3_16382 CTAAGGATTTGAGGATTGATACTAAGCGAGCCAGTGGAGCCGGGGGGCAGCATGTGAACA Gene GeneID:534354|MTRF1L:NM_001046378:12_cdna Constitutive 5 NULL GeneID:534354 9 GENE MTRF1L MGC137648 mitochondrial translational release factor 1-like EMBV3_00522 GCAGTTCCTAGGCCAAATGTGTTGTCCATGTTGCAAGTTGATCTAGCTGGCTGAAGACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39976 CAACTGCGCAATGGATTCCTGATGGTCAGATGGGGGGTTATGTGACTTACTGGGTCTACA Gene GeneID:505317|TRPA1:XM_002692726:179_cdna Constitutive 0 NULL GeneID:505317 14 GENE TRPA1 NULL transient receptor potential cation channel, subfamily A, member 1 EMBV3_07805 TAGGGAAGAGTTCTGACCTGTACCTATTATGGTTCTTATTGAAAACAAAACTGGATGTGC Gene GeneID:100300817|LOC100300817:XM_002685265:76_cdna Constitutive 0 NULL GeneID:100300817 2 GENE LOC100300817 NULL similar to NCK-associated protein 1 EMBV3_01558 GTGGGGCTGGGACATGCACTGAGTGTTGCACTTTTCTTTAGGTAGGGAGGCATGTTGAAT Gene BVV0102_261633 + 0 NULL GK000003.2:8392007-8392620 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168316 TCONS_00168313 TCONS_00168305 TCONS_00168307 TCONS_00168303 TCONS_00168309 TCONS_00168304 TCONS_00168311 TCONS_00168318 TCONS_00168310 TCONS_00168308 TCONS_00168312 TCONS_00168301 TCONS_00168314 TCONS_00168317 TCONS_00168302 TCONS_00168315 1 XLOC_103053 Coding TCONS_00168311 XLOC_103053 Coding Coding DEDD 3:8382001-8392717 j TSS126242 2303 1 TCONS_00168311_3 318 6 0.785627624825012 0.00549833357258514 0.00422461922239103 0.0101042393388903 0.00609281485071728 0.00448434586078302 0.000755102800945503 0.0033037335676006 0.00734060582835583 0.00298071098230098 1.01400653152276e-12 0.000763213605901681 5.84951919243034e-16 0.00156342099666204 0.00441033761201907 0.00103512610361571 5.61704361374385e-06 0.00202522707799002 4.14880611004523e-10 0.00589491860843288 0.00365095181331558 0.000978829743280306 3.6406953722522e-09 7.45615143024322e-10 8.70984410968082e-06 0.0113903500108837 0.00795429877258962 0.00656324056655599 0.00151461604050091 3.49285242515131e-09 1.86952668030271e-06 XM_005203536.1 DEDD PREDICTED: Bos taurus death effector domain containing (DEDD), 0.0 3460 100.00 0.832392531480677 NM_001039712.1 DEDD Homo sapiens death effector domain containing (DEDD), transcript 0.0 3155 90.57 0.996092053842814 TCONS_00168311_3 sp|O75618|DEDD_HUMAN DEDD_HUMAN Death effector domain-containing protein; 0.0 649 98.74 0.99685534591195 1 coding 1 1 1 1 -0.85201563595129 0.0138752398806397 -0.371927634758237 0.049067805409373 CCAGCTTGAGAACCTCAGGAGAGGGAGGTGACGGGACGCTGCGAGGAAGAGACCTGGGAAATTAAGTTTCCTGCAGAGTATAGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGCACTGTGTACCTGAGCCCCCAGCATGGCGGGCCTAAAGCGGAGGGCAAGCCAGGTGTGGCCCGAAGAGCACGGTGAGCAGGAGCACGGGCTGTACAGCCTGCACCGCATGTTTGACATCGTGGGCACCCACCTGACACACAGAGACGTGCGTGTTCTTTCCTTCCTCTTTGTTGACGTCATTGATGACCACGAGCGTGGCCTCATCCGAAATGGACGTGACTTCTTACTGGCGCTGGAGCGCCAGGGCCGCTGTGATGAGAGTAACTTCCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCATGACCTGCTGCCCTACGTCACTCTCAAGCGGAGACGGGCTGTGTGCCCTGATCTTGTAGACAAATACCTGGAGGAGACATCAGTTCGCTATGTGACACCCAGAGCCCTCAGCGACCCAGAACCGAGGCCTCCCCACCCCCCTAAAACAGTGCCTCCCCACTATCCTGTGGTGTGCTGCCCTGCTTCGGGCCCTCAGATGTGTAGCAAGCGGCCAGCTCGAGGGAGAGCCACACTTGGGAGCCAGCGGAAACGCCGGAAGTCAGTGACACCAGATCCCAAGGAGAAGCAGACATGCGACATCAGACTGCGGGTTCGGGCTGAATACTGCCAGCATGAGACTGCTCTGCAGGGCAACGTCTTTTCTAACAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACACCATCCTCAAGTCCCGGGACCTGGGCTCCATCATCTGTGACATCAAGTTCTCTGAGCTCACCTACCTCGATGCATTCTGGCGCGACTACATCAATGGCTCGTTACTAGAGGCACTTAAAGGTGTCTTTATCACAGACTCCCTCAAGCAGGCTGTGGGCCACGAAGCCATTAAGCTGCTGGTGAATGTGGACGAGGAGGACTATGAGCTGGGCCGACAGAAACTCCTGAGGAACTTGATGCTGCAAGCATTGCCCTGACCTTTTTCCCCTTCTCACTTCTCTGGGGACTTCTCACCGCCCACCTCTGGAGCTTACATACTGTTCTGGGGTTTGTTCTCTACCCTTCCAACCAATCACACCCCTGCCTTTTTTTTTTTTTTTAAAGGAAAAGACAAAAGAAAAATGGAAGTGGTGTCCCCCACCCCTCCCTGCACCCATGTGCCTGGCTTCCCTTTGTTCCTTTTCCACTTACCCCCTCATTGTGTCTCTACAGTCACCTTGCCACTGAGCCGTAAGAAATGTGTAGGGAGAAGCAAAGTCTATAGGTCATAGTCTTTGTAAGGGATTGAAGTGATCACTGCTTTTGGGGTGCATTGAGGGGTTGTCAGTACTTCTGGCTTTATGAGGGCTCTTAAACTTTGTCTGAAAAACCAAAGGGCTGTCAGTAGGGAGCTGTGTGGTAGGTGGGACTCTGAAGTGTATTTTGGAAATTAATCACCACCCTCTCCCAAATTATAGAATTTTTAAAAAACAAAGAAGCTGTGGCCCTTTCCACTCTCTCCTGGCCTCTGGTGCTGCTCCTCTCTGCCTCGTTTCCTCCATTCCATGGCTTGAAACCTCTGCCTGGTGTGGCTCCTTCCTTTTCCCTCTCTGTCAAACTCTCTTCAAAGGAATAATAGGTAAGAGGACTAGGTCAGCCTAGTCAGTCCCAACTGTGGTGTGTGCGCACACACACACACACACACAGGGTGGATGGAGAAGCGGTTGCTGGTTAGAATACACTCCCCCTGAAAAGGGGAAGGGGGAGTGTGACACTTTCTTTCCATGTTCAAGTGAAAATAAATAATGTACCCTGCAGCCCTTTCCCCTTTTGCTTTCTTCTGGCTTGGGCAAAGGGCATCACAGGTGAGAGTGAAGTGATGCGGTAGCAATGCCTCTCTTCCTTGTCTTTCCCCATCCTCTACCCTCACTCCCACTCCCAAGTTTGGGAGCGTGGGGCTGGGACATGCACTGAGTGTTGCACTTTTCTTTAGGTAGGGAGGCATGTTGAATAAGCCAGGAGGCCTAGAACTGGAGCCTAGTCCAGCTGGTACAATACCACCTCCCCTTTCAGCTCCCAAAAGAGATATTCAGACACAGACTTTATGATGATTATATATTTTTTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACAGTGACTATATTAAATTCCACCT EMBV3_28924 CATGATGATCCTGAAGCTAAAAAATCCCAAGGCCACAGAGAATTTCAACCCTGAGTGGAG Gene GeneID:512869|RNF213:XM_002707766:305_cdna UTR3_Alt 2 NULL GeneID:512869 19 GENE RNF213 NULL ring finger protein 213 EMBV3_02561 GGCATATTTGTGCTAGTGATGCCATAAAAGGAGAAGGATTGCAAGAAGGTGTAGACTGGC Gene GeneID:519014|ARL6:NM_001075782:93_cdna UTR3_Alt 2 NULL GeneID:519014 1 GENE ARL6 MGC140307 ADP-ribosylation factor-like 6 EMBV3_16033 TCAATGGGGTCAGGATAGCGGCACCAGGAATTGGGGTTTGGAATCCTGCCTTTGATGTCA Gene GeneID:534734|MRI1:NM_001046387:31_cdna Constitutive 0 NULL GeneID:534734 7 GENE MRI1 MGC134253 methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) EMBV3_23450 GAGCATTCTGGACATCAACACAGGGGCACACGAGCCCTCCAAGGCCCTATTTTCACTTAT Gene GeneID:100337435|LOC100337435:XR_084013:484_cdna Constitutive 0 NULL GeneID:100337435 21 PSEUDO LOC100337435 NULL TNFAIP2 protein-like EMBV3_35850 GCAAACACCTCATCGGACGTGTAGGAAATAGCTGTGCTGGCAAGAACCTTCTGTCTTCAG Gene GeneID:787839|MSL1:XM_002695963:283_cdna Constitutive 0 NULL GeneID:787839 19 GENE MSL1 NULL male-specific lethal 1 homolog (Drosophila) EMBV3_12903 GCTGGATCCTGACAGAAGTCTCCTTGACAATTTGAGGGGCAAAGTGATCCTTGAATACCC Gene GeneID:505578|ZNHIT6:XM_002686285:136_cdna UTR3_Alt 2 NULL GeneID:505578 3 GENE ZNHIT6 C3H1ORF181 zinc finger, HIT type 6 EMBV3_25548 CAAGTGTTATAGAAAAATGTGTAGAGTGGGTAAGGGAGATGTGGAGTGTTGGAGTTCAGG Gene BVT0101_044500 + 0 NULL GK000011.2:82855965-82885996 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033310 1 XLOC_019544 NonCoding TCONS_00033310 XLOC_019544 NonCoding NonCoding - 11:82883115-82883414 - TSS24309 299 0.625418060200669 1 0 0 0 3.09497619681502e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.79660982520599e-05 0.000192412809075698 0 0 0 0 0.0011586079503103 0 0 0 0 0 0 noncoding AAGATGCCTGTGATAAGAAACACATCGTAGCAAAGAACTGAGTTTTCCCTTACACAGGGGAAAGCTGACTTTCTTCCATTTTAGCGTCTACAGGTATACAGTAGAGCGCTGTGTTCTGGCAGAGTCTACATTTTAGTGAAAGGGGGCAGAGAATAAACAAATGTAATAAAATATAAATTATATAGCATTTTGGGTAATGACAAGTGTTATAGAAAAATGTGTAGAGTGGGTAAGGGAGATGTGGAGTGCTGGAGTTCAGGAAAGGTAGTTACAAATTTAAAATGAGCAGTTCGGGTAGG TCONS_00025722 TCONS_00025723 . 3' 90 TCONS_00025722 TCONS_00025723 . 3' 388 EMBV3_12752 TGACGCCTCGCAAAGAGAGGAGGCCTAGCATGTTCGAGAAGGAGGCATATGCACAAATTT Gene GeneID:789619|TCTE3:XM_002690400:21_cdna Constitutive 0 NULL GeneID:789619 9 GENE TCTE3 NULL t-complex-associated-testis-expressed 3 EMBV3_04614 CTGGTACAAGGCAGAGCCGAGATCCAGAGACACACCTTCAAGCCAAAGCACAGCTTCTCT Gene GeneID:100337254|LOC100337254:XM_002685156:134_cdna Constitutive 0 NULL GeneID:100337254 1 GENE LOC100337254 NULL salt-inducible kinase 1-like EMBV3_20127 TTTAAGTAACAGCCGCTCACCCTTGCTCCAGCCCCATTAGGACCCCCACCACAAGACAAA Gene GeneID:533562|TM9SF4:NM_001098077:1195_cdna Constitutive 0 NULL GeneID:533562 13 GENE TM9SF4 MGC139253 transmembrane 9 superfamily protein member 4 EMBV3_33100 ACGAGTTTGCCACCACTACCGAGGACACCGTGGAGAGCAAAGAACCCAAGAAGGCAAAGA Gene GeneID:281401|PIGR:NM_174143:10_cdna UTR3_Alt 2 NULL GeneID:281401 16 GENE PIGR NULL polymeric immunoglobulin receptor EMBV3_31227 TTCTGGTGGCCATAAACGGAACCTCCCTGACTCATATGTTGCCCCTCCAGATCCGAGAGA Gene GeneID:100301247|LOC100301247:XM_002696329:13_cdna Constitutive 1 NULL GeneID:100301247 20 GENE LOC100301247 NULL similar to cyclin A1 EMBV3_18485 CATTTTTGTAAAGTTCCGCAAAACATACAGATATATACAGTATATAAATATATATATATA Gene GeneID:540039|NPTN:NM_001076199:240_cdna Constitutive 2 NULL GeneID:540039 10 GENE NPTN MGC139829 neuroplastin EMBV3_06446 CTGAGAGCACCTGGGTGACTTCTGACTTTGATTTCCTGGCAAAACGTTGACTCTCCATAG Gene GeneID:614048|BRD4:XM_002688561:218_cdna Constitutive 0 NULL GeneID:614048 7 GENE BRD4 NULL bromodomain containing 4 EMBV3_37870 TGCTCATCATCCTCATCCTGCCCTTCATCTACCCCGGCGTCATCCGGTGGGTGCTCAGCT Gene GeneID:515529|RNF186:NM_001035311:173_cdna Constitutive 0 NULL GeneID:515529 2 GENE RNF186 MGC127130 ring finger protein 186 EMBV3_33696 TCCAGGGGGGTTGCTGTTTCTGTCTTAGGTGTTTTATGCTAGCTGTGTTGCTGTTTATGT Gene GeneID:786246|LOC786246:XM_002690622:5_cdna Constitutive 0 NULL GeneID:786246 10 GENE LOC786246 NULL similar to LOC784904 protein EMBV3_24938 AAAGATTTTTCCCAGGACATTCCAACTGCCCGTGTGTCTGTGCTCTGGATGGACCTGTCT Gene GeneID:782360|VWC2L:XM_002685562:36_cdna Constitutive 0 NULL GeneID:782360 2 GENE VWC2L NULL von Willebrand factor C domain-containing protein 2-like EMBV3_35858 GCCAGGAAAAGTGCATCAGAGCAATTGTCTTAGCACGGAAAAACACACCCGGTATTTTGA Gene GeneID:615821|LYRM2:NM_001113310:44_cdna Constitutive 0 NULL GeneID:615821 9 GENE LYRM2 MGC133701 LYR motif containing 2 EMBV3_17921 CCCTCTCACCTGGCCGGCACAAAAAGACCATCCCCATGTTTGTCCCAGAATCTACATCTA Gene GeneID:505335|B9D1:XM_002695821:185_cdna Constitutive 0 NULL GeneID:505335 19 GENE B9D1 MGC133530 B9 protein domain 1 EMBV3_39362 GAGCTCACAAGCTCTAAACCGGAGGCGTTCAATGCTAACAGCAACCTCAGTTCTGGACCT Gene GeneID:281573|VIL1:NM_001013591:20_cdna Constitutive 0 NULL GeneID:281573 2 GENE VIL1 NULL villin 1 EMBV3_19187 CGAGGCTCGGTCAACATGCCTTTCATGAACTTCCTAACGGAGGATGGCTTTGAAAAGAGC Gene GeneID:280946|TST:NM_177489:158_cdna Constitutive 0 NULL GeneID:280946 5 GENE TST MGC137244 thiosulfate sulfurtransferase (rhodanese) EMBV3_02499 GCTGGTCCTTAGCTCTTGGATGGCTGGTTTCCTCATCATTTTTCCAGGACTCATTTTAGG Gene GeneID:788322|LOC788322:XM_002687496:379_cdna Constitutive 0 NULL GeneID:788322 5 GENE LOC788322 NULL similar to olfactory receptor 822 EMBV3_20817 CAGGAAACTATCATGGATGGTACAGGACCTTGTGGTAGTTGGCTATGATTGGGAGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_07209 CATCGAATACATGGCCGAAAGCGAGCAGGCCAAAGAGCTGATCCAGTTCCTGCAGACCAA Gene GeneID:100299957|LOC100299957:XM_002683896:2_cdna Constitutive 0 NULL GeneID:100299957 Un GENE LOC100299957 NULL similar to isocitrate dehydrogenase 3 (NAD+) alpha EMBV3_23735 TGATGGCTTCAAACCCCAAACCCTCCACCAAACGGCAGACCGGGAATTTGCGATGTAACA Gene BVV0102_234271 + 0 NULL GK000002.2:54121566-54592915 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107066 TCONS_00107070 1 XLOC_062979 NonCoding TCONS_00107066 XLOC_062979 NonCoding NonCoding LOC786771 2:136711762-136940996 o TSS78688 747 1 TCONS_00107066_3 112 2 0.996750031627209 0.000244858930473881 0.000100887221058775 5.79920357525288e-09 0.00103541292132117 0.00227537395762402 6.3486870205991e-09 5.09088208101086e-09 0.000577617952538637 0.00178693868771328 0.000244630320923372 0.00022436977588454 5.68286505583938e-10 2.12470858708803e-09 0.0073831851735047 0.000788417799782349 0 0 1.67926264766734e-05 0 1.76490746101309e-05 0 0.000671790020845636 6.13965832555635e-06 0.000237944411458437 5.73680352743805e-05 4.8108802688662e-10 1.25485256341994e-11 0.000102545978138693 1.04001592877864e-05 2.50659917351584e-10 XM_005200400.1 LOC101908506 PREDICTED: Bos taurus ubiquitin carboxyl-terminal hydrolase 17-like protein 22-like (LOC101908506), mRNA. 0.0 1326 99.47 0.998661311914324 0 noncoding 0 0 0 0 0.0325370906486804 0.768901115935124 -0.0747392039785758 0.197327309580397 CCGCACTGAGGAACGACCCGAGCCTACCCTAGATTGTGATAGCAAGACAACTGGACTTCCGACTCTGCCCGTCCTGTCTGGCAGTCTCATCCAGCTGGGCCCCGGGCAAACGCCTCTGGACGCGAGGAGATGCGGCCGGCCTCCAAAGTGCCTGGGGCGGTGGGGAAGCTGTCCTCCCCTAGCTGCTTTCGCGACTGCCTCATGGGCCCGTGACCCGCTGGAGGGGCATAGAGGCCCTTATCGACCACCTCTTGCGTTTTTCTTTCTTTGGCTTGGCTGATGGCTTCAAACCCCAAACCCTCCATCAAACGGCAGACCGGGAATTTGCGATGTAACATCTCCGACCTCGAGGGCCAACGCTGGCTCCTGACTGCGCGAGTCGGCGTGGCAAGGAACAGAGAGCGTTCCGATGGCTTGTTTCCCCCGCATGGCTACCTACGCCGCACCATGCCCTCCGCACGTAGAGAGGACAAAGAATGATGAGCAGTATCTTCCCCCGAGAACACGAACAAGCGTGCCCTGCACGAGGAAGCGGAGCCACCCACGGTCCGCCCTCATCATCACCACGCATCTTCCTCCGCCCCATCGTCTCAAATGGACTTACTGCTTGCCCCATCCACACCCTCTGAAGAAGGAGGAGGAGGAGGAAGAGGAGGAGAAGAAGAAGAATGTCGATTGGGGTGGCGTGACAGAGGGAATGGGAAGGTGGCCTTATGCTGGGCGAAATCCGTGCAAAAGAGAGAAAAA TCONS_00107067 s 3' 47497 TCONS_00107067 s 3' 47497 EMBV3_25337 AGATACCGGGATGGAAGGTGATTGGTGTGGCCTCATTCCTGTTGGACAGCCTTGCAATCA Gene GeneID:788066|TPK1:NM_001080370:763_cdna UTR3_Alt 2 NULL GeneID:788066 4 GENE TPK1 NULL thiamin pyrophosphokinase 1 EMBV3_34144 GCCCAGCGTCAGAAGTCTAGTTTTATAGGCAACTGTCCTGTGATGTCAGTGGTGCAGCGT Gene GeneID:788696|LOC788696:XR_083779:310_cdna Constitutive 0 NULL GeneID:788696 10 PSEUDO LOC788696 NULL similar to GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like protein TC4) (Androgen receptor-associated protein 24) EMBV3_04589 CTGATCATGCACTCTTCACTGGCCTGATCATGCACTGATCACCTGGCTGATAATGCACTG Gene BVT0102_090261 - 1 EMBV3_39191 GJ058453.1:1-1004 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21444 CATGGGTACAGACCACTGGGCTCCACTCCTTCATGGCTTCAGAACTTTGTCAGGATTTTG Gene GeneID:617574|LOC617574:NM_001105006:15_cdna Constitutive 0 NULL GeneID:617574 1 GENE LOC617574 NULL similar to membrane-associated phospholipase A1 beta EMBV3_17966 GTTTGAAAGGTACGACTGAGGACTGCTGTGTATCTACGTGTTTGCAAGACTCTATGAGTG Gene BVV0101_064168 + 0 NULL GK000015.2:59800586-60530179 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23426 TCACACTGCGAGAGCCCCTTCACTCCCAAAAGATGTGTCTTACGAGAAACCAACATGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32695 TTAACGACTCTCCTGCCTTCCAGCCGCTGGAGGTGCTGGCTTGGGCTCAGTTACCACAAT Gene BVV0102_422400 + 0 NULL GK000023.2:16541734-16554040 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134254 1 XLOC_081348 NonCoding TCONS_00134254 XLOC_081348 NonCoding NonCoding - 23:16549337-16550020 - TSS100115 387 1 TCONS_00134254_1 58 2 0.435483870967742 0.00263675761919026 0.00444000683973935 0.00129125477571753 0.0012016348204488 0.000778211249970168 0.00211665381654337 0.000150689901149751 0.000901726713391518 0.00106017329173316 0.00255162681487973 1.77456400843264e-05 0 0.000289152453423537 0.000711068943147759 0.00306796181015323 0 0 0 0.00441929880556693 0.00252723097799718 0.00018041799900628 0 0 0 0.00214836549470725 0.00183874041811295 0.00148371217666564 7.44586918565489e-05 1.2544217697673e-05 0 0 noncoding CACCCTGGCCCAGGTGCTCTCAGTCTTGAAGTCTCAGTGGGTTCCCCCCGGGAGGGGGAGGGAGAGAGGCAGGTGTCCTTAACGACTCTCCTGCCTTCCAGCCGGTGGAGGTGCTGGCTTGGGCTCAGTTACCACAATACAGATGGGGAAGAGCCCTTTGGCTTGCTTTGTTTTTGAGTTTCAAGATCTTCCCAGAATAAGAAGGCTGAAGACCCCCACCCCCATCCGTGCCATCAGCAGCCTGCCTCACCTGCTGTCTGACTGGGCCACCTCGAGTTGGGACAGCTACCCTTCTACTGGCCCATTCCCAGCTCCCTGACACAGTCGAGGAAACTGAGGCTCTGAAAAATGCAGTTACATCGCAGAGGATTCTCTGGTAGGCACGTG TCONS_00132526 r 5' 4641 TCONS_00132526 r 5' 4021 EMBV3_22461 CCACAATACAGAAAGCTTTGTACCGTATTATTGAGGGAAAGAAAGTAGCTTGTCATCCCG Gene BVT0101_041223 + 0 NULL GK000004.2:66768965-66785265 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181858 TCONS_00181860 TCONS_00181861 TCONS_00181859 TCONS_00181857 TCONS_00181862 1 XLOC_110709 Coding TCONS_00181862 XLOC_110709 Coding Coding FKBP14 4:66758678-66770727 = TSS136015 2939 1 TCONS_00181862_1 211 0.0571623001020755 4 0.756391102257636 1.37555495468909e-05 0.000303715301394373 4.0932743396256e-05 8.10354698062126e-06 3.8558423326246e-05 3.56259795458344e-06 4.34189608499424e-05 9.02429461432051e-09 0.000151905395815776 3.579769257444e-05 9.46913315740528e-06 3.82227282097595e-10 4.08960344096698e-06 1.2818144775021e-05 8.94929899449341e-06 0.000706578921775601 0 1.19799440267329e-10 3.29949380909526e-06 0.000102048938591044 0 1.25094578603529e-17 2.51207470777361e-19 0.000200154066205458 9.01315794864358e-05 3.7332524062747e-05 2.33266258257125e-05 7.51596105083406e-05 8.1290623544819e-10 5.70143095426336e-10 NM_001076391.2 FKBP14 Bos taurus FK506 binding protein 14, 22 kDa (FKBP14), mRNA. 0.0 5274 99.80 0.999659748213678 NM_017946.3 FKBP14 Homo sapiens FK506 binding protein 14, 22 kDa (FKBP14), transcript 0.0 1561 86.06 0.460360666893501 TCONS_00181862_1 sp|Q9NWM8|FKB14_HUMAN FKB14_HUMAN Peptidyl-prolyl cis-trans isomerase FKBP14; 4e-149 418 96.68 0.995260663507109 3 coding 0 0 0 0 0.00306033643665471 0.982003824803169 0.029086947251031 0.713712926950291 GGTGAGTTCGCAAAGCGTGGGAAAGTTGTCGGTGGTGAATGTGCCACGTCTGCTAGGAAGGGAGGGAGTCATGACTTGCCAGAGGCTGTTGTCTTTAAGTCTTAAACTACTTTCTTAACTCTATGAGGTCGGGGGCCCTTTCTGTGTTTTTGTAGCAACTTCTTTCCTGCCCTGGCAACATGAGGCTTTTCTTGTGGAATGCAGTCCTGACACTGTTAGTAACTTGTTTGAGTGGGGCTCTCATCCCAGAACCAGAAGTGAAGATTGAAGTTCTCCAGAAGCCGTTCATCTGCCATCGCAAGACCAAAGGAGGGGATTTGATGTTGGTCCATTATGAAGGCTACTTAGAAAAGGACGGCTCCTTATTTCACTCCACTCACAAACATAACAATGGTCAGCCTATTTGGTTCACCCTGGGCATCCTGGAGGCTCTCAAAGGTTGGGACCAGGGCTTGAAGGGAATGTGTGTAGGAGAAAAGAGAAAGCTCACCATTCCTCCTGCCTTGGGCTATGGAAAAGAAGGAAAAGGTAAAATTCCCCCAGAAAGTACACTGATATTCAACATTGATCTCCTGGAGATTCGAAATGGACCAAGATCCCATGAGTCATTCCAAGAAATGGATCTTAATGATGACTGGAAACTCTCTAAAAATGAGGTTAAAGTGTATTTAAAGAAGGAGTTTGAAAAGCATGGTGCAGTGGTGAATGAAAGTCATCATGATGTTTTGGTAGAGGATATTTTTGATAAAGAAGATGAAGACAAAGATGGATTTATATCTGCCAGAGAATTTACATATAAACATGATGAATTATAGACACATGTCTCCCATTTTACATGGCATCCATCCTTAAAAGCAAGGGTAATTATCCCGAAAGAAAGTCTTATTTGTTAACTATGTTCTGTTCATGCTTTGTTTTTTTTATTTTTATATATTTTTCTGAATATTATTTGAAGAACCCCTTAGGGCTTCTAAGTACATTTATTTCTGGTAAGTTATTGGGAAGAAAAAGGTGATCTGTTTTTGAAGAGAAGACTTCTGGACCATTTTTCACTTTCACATGTGAAGCTGTATGTTTTACTTACATACATGTAATTTTCAAATATTGCAACCAGGAGCGTGCCCCACATAAGAACAGGTTACAGCACAGATCAGCACCCTCTATTTCTTTTTCCCTCATCTCCAAGTTAGATGCTGATATTTGAAAAGCCTTTAGCAATAACCCAAGGCTTATTATTTTCATGTTGTAATGAAACAGTGTGCCTATTACTGCTTTTGAGTCTCTGCTTGAGGAAAACAGGAAAATGGTTGTTGAGCTCTACTTTTAAGTAACTGCTTTACTGAGGAGATGTGCAATGCTGAAGTGAGGAACAAAATTCATAATTTATAAATGTTTACATTGAAATCTGCCTTGGATTTAAGCTACATAACTAGCAATGAATGACCTACCATGATTAACAGAACAATTTATTTATGTGTTTATTTCTTCATAATAAAATGTGTCAAAATATTGCAAAGGAGGTGAAGAGTTGGAATGAGTCACTGTTTACTTTTTAAGGCTAGCAGATCGCCCTTCCTCATTCTTTAATTGATAAATGTCTATAACTAATGTGTTATACTACAGTAACATTGTCTTATAAGAGAAATTAGTGATACAATAAAAAATTTCCCATTTCTGCCTCATCAAAAAAAAAAAAATGAGGCAGACCCACAGCAGCTACTATTTTTTAAAAAATTTTTATTGAAGTATAGTTGCTTTACAATGTTGTTAGTTCACAGCGGCTACCTTTGAATAGAGGTCTATCACAAGTCAAAAGTTGATGATTTTATAATTTTATCTTAAATTGGAATTCTTCCCCAATACTTTTTAAAAATACCCAAACCTCATTTGCTAAGAAGAGTAAGTTTACAAAGTGATCTCAAGTGCATCATTGTCCGATTCTCACTAAGCCTATGAAAAAAAGAGATCTTATTGTACCTATTTTATAAATGAGAAAGTTGTCATTCAGAGAGATTGATTTTTGCGCCCAAGGTCAATCAGTAACTAACTTGTAGACCCAGATTTCAATCCCCAAGTTAAGTATCTTTGTACTGCCCTCTGGTATTGAAAAGGATTCTCTCTTCAGTTTGCTCTCCTAGTAGTCAACTCTGTTTTTTGTCCTTGGATCCTTATCCTTTGAAGATAGTTAACTGGCTGTATGTGGTGCTTTTGAAATCCCATGATCCAGAAATGTCTCTGGTTTAATTGAATAATCTTAGGGTGAGCACTGAATTGCCTCAAAAACCCTAGGGGCGAGAGGGTCCAGGCACGTGTCTTAGTTGTTTATCTCTGGTACTTATGAACAATTACTACATCATGTATGGACGACTTTCACTGATTATATGTGGACATTTTCATCACTAAAACAGGAAGTTCTTGGGAAGAACATAAATAACACCTTTCTCTGATGAAATCACCTATATTTAGAAAACTCTTAAGTTGTCACTGCTGTTTTCCTCAACTTGAAGGACTTACAAACCACAATACAGAAAGCTTTGTACTGTATTATTGAGGGAAAGAAAGTAGCTTGTCATCCCGTGCTATATTGTATAGACATTACTGATGATGCTATCTATGGTGGAAGAGGAAAGGAAAAAGAATTTTGGTTATTCAGGGAGCATATTATTTATCTTGTATGAATTTGGATCAATTCCCACCTAAATATTTAGATACAAGTATGAAATGACAGCATATAAATAGGTTATGGTTGTTTTTACATTATCTGCCTGTTTAGTGTAGCAGCATCTTTGCACTACTTTTCATTCGTAAGAATAATCAGACATGAACTGTGACTCCACTTGTATATAATTTGCCTCAGTAATACTGCTAAGATATGTTATATTTAAATTTCAACAACTCTGTTGTGGTATTCTTTTCAAAATAAAGTTTATTTGGGAAAT EMBV3_08713 ATGCCTAAGAAATGTGGTGCGACGAACAAGATGTGACAACCGAGGCTGTGAGTGTAGCCA Variant GeneID:509050|C21H15orf40:NM_001075386:99_cdna 94^220 1 EMBV3_00151 GeneID:509050 21 GENE C21H15orf40 C15orf40 MGC128518 chromosome 15 open reading frame 40 ortholog EMBV3_04757 CCCTAGTCGCCTCTTCCAAATGGTTCTGCAGCCCACCAGGTTTTCATCATCTACAAGCTT Gene BVV0101_069199 - 1 EMBV3_03495 GK000024.2:51045253-51115768 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143289 1 XLOC_087711 NonCoding TCONS_00143289 XLOC_087711 NonCoding NonCoding - 24:51050394-51050932 - TSS107500 538 1 0 0.00144149528965877 0 3.44015331686141e-05 0.000277834135028367 4.58845657258234e-05 6.64880425715199e-06 0 0 0 0 0 3.32312672200408e-05 0 0 0 0.00427102064976463 0 0.000186549647478702 0.000279905574523771 0 0 0.00165516820058551 0.000153469119332335 0.000218127361754948 0 0 3.26718630378188e-05 8.92674092183178e-05 0.000162422044182211 0 XR_243850.1 SMAD4 PREDICTED: Homo sapiens SMAD family member 4 (SMAD4), transcript 8e-170 600 85.66 0.990706319702602 0 noncoding 0 0 0 0 0.0383886572395944 0.735749360020983 -0.00434016216415865 0.958367942445854 AGGGTAGGGGGGTTGGGGAGTCCTGGTAGAGGCCAGCTCAGTGGTAGCTGGAAAGGAAGGGATGAAACCAGCTGCTGTTGCTATGGCTGCTTGTCATTGATAGAAGGACTCAGGGCTTGGATCGGTTAAAAGGCTAAACACGGATTCAACAAACTTCTTCCAAGTATTGGGTTCTGGCCACTGCCTTGGACGTGTGATTTAAGGGAAAAGTGTGAAAGCTTGTAGATGATGAAAACCTGGTGGGCTGCAGAACCATTTGGAAGAGGCGACTAGGGGTTGGGGACAGATTTGGCGGTAGTATCTGCCAATTCTGTCTCCTCTCCTGAAGTCAGAGGAGCCATGCCGTAACTCAAGAGACGAGCCACACTTAGCTTCTGCTTTGGGGAAAACTGATCAGCTAAGGGCTCTGGTAGGTCCTTTGTGGCTTTCTGTATGCTTTTGCCTGGTTGAAGTCTGTGGCTAAAAAACAGTTGAACCTTTCCTGAGAACTCTGTAACAAAGTATGTTTTTGATTAAAAGAGAAAGCCAATTAAATCAT TCONS_00139275 TCONS_00139276 TCONS_00139277 TCONS_00139278 TCONS_00139279 TCONS_00139280 TCONS_00139281 TCONS_00139282 . 3' 2933 TCONS_00139275 TCONS_00139276 TCONS_00139277 TCONS_00139278 TCONS_00139279 TCONS_00139280 TCONS_00139281 TCONS_00139282 . 3' 3470 EMBV3_12347 TACCTCAGTTTGATGACGACGCAGACACTGAACCTGAGCGTGGCCGAGGGCCCTAACTAC Variant GeneID:514997|ZNHIT1:NM_001046185:179_cdna 222^301 1 EMBV3_18128 GeneID:514997 25 GENE ZNHIT1 MGC140071 zinc finger, HIT type 1 EMBV3_33752 CAACATCCTTGAACAGCTGGAGAAGATCTGGGAGGTATGTGACTTGCCCAGGGTTACCTG Gene GeneID:616118|CDK15:XM_002685511:43_cdna Constitutive 0 NULL GeneID:616118 2 GENE CDK15 PFTK2 cyclin-dependent kinase 15 EMBV3_39531 GGGACTGGAGGATATAGCTGAGAGAGGCTAAAGTTAGGGACAGTTAGCTGAGGTTCACGT Gene GeneID:508197|ANGEL1:XM_002691122:62_cdna Constitutive 0 NULL GeneID:508197 10 GENE ANGEL1 NULL angel homolog 1 (Drosophila) EMBV3_32790 GGATGAGTGCGTACATCATGACGATCTCAGATATGAGCCCAAATGAGATTTCCTATGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24995 AAGTTGGCCCCCTCTGGACTAACCACTGTCCGCAGATAAAGGCAAAGACATACTGCTCGT Gene BVV0102_055500 + 0 NULL GK000017.2:74412809-74415360 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17703 AGAGTAATGGGACCATTATCCATGTGAAAGATGAAGAATAAGAGAAACAGGATGCTTCAG Variant GeneID:281050|CD28:NM_181004:55_cdna 407^531 1 EMBV3_31097 GeneID:281050 2 GENE CD28 NULL CD28 molecule EMBV3_23208 TTATCTGTATCAGTTATACTGAAAGTTAGATTTACATTTTGCATTTAATTTTTCATTGTA Gene GeneID:777773|ARL6IP1:NM_001078157:16_cdna Constitutive 2 NULL GeneID:777773 25 GENE ARL6IP1 MGC139614 ADP-ribosylation factor-like 6 interacting protein 1 EMBV3_13061 TCCGGCCGCCCGCTTCCTCCTTGCCTGGAGCTTTCTCCTGTGCTTCTGGGGAGTATCTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20971 CAGTGCTCAGCGGATTCGTAGAGAGGAGAGTGTACGTGGTAGAAGACCAAAGAAGGGATG Variant GeneID:777789|C7H5orf32:NM_001078164:41_cdna 109^332 2 EMBV3_30028 GeneID:777789 7 GENE C7H5orf32 C5orf32 MGC134074 chromosome 5 open reading frame 32 ortholog EMBV3_25199 GGGAAGTAACTGCGTGTGAGACTACTTGTGTTTGAAGAATGATCCCTCGTCTTGGGGCTC Gene GeneID:533499|MMS19:NM_001102157:180_cdna Constitutive 0 NULL GeneID:533499 26 GENE MMS19 MGC159372 MMS19 nucleotide excision repair homolog (S. cerevisiae) EMBV3_22268 GCTTCAGCTACGCCCTCAACCAACCCAGAACCCCTTTGCACTACTTTGACAATCTCTGCA Gene GeneID:404164|ST3GAL5:NM_205807:35_cdna Constitutive 0 NULL GeneID:404164 11 GENE ST3GAL5 SIAT9 ST3GAL-V ST3 beta-galactoside alpha-2,3-sialyltransferase 5 EMBV3_01215 AGCGTATGAAAGTTAGTCAGCTGAGACCATCTGTCATGTTTATCAGTCTCTTATTTGTCC Gene GeneID:327711|CTSS:NM_001033615:34_cdna Constitutive 1 NULL GeneID:327711 3 GENE CTSS MGC127029 cathepsin S EMBV3_05492 CCAAAGGGCTACTCGGGACCCTGAAACGGGGCTCTTATTTCTTTCTCTCACTGTATAATG Gene GeneID:100337278|LOC100337278:XR_083844:315_cdna Constitutive 0 NULL GeneID:100337278 14 PSEUDO LOC100337278 NULL epiplakin 1-like EMBV3_42922 TCCCTGCTTTTTGCTTGCTGTATCTTCATGCTGCTCCTGCCCTTCTCCATCATTGTGGCT Gene GeneID:511586|LOC511586:XM_002689049:12_cdna Constitutive 0 NULL GeneID:511586 7 GENE LOC511586 NULL similar to olfactory receptor Olr1386 EMBV3_08987 CCTGGCATATACCTGTTCTTCCCCCCTCCACTGACACAGACACATGGACACAGACGTATT Gene GeneID:509885|IARS:NM_001101069:90_cdna Constitutive 0 NULL GeneID:509885 8 GENE IARS NULL isoleucyl-tRNA synthetase EMBV3_17662 TCGCTCCCACAGTGCAAAGAAGACGCCGAGATATTTAGTCTTGGATATTGCAGATAATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37877 TTGACAGTAGCAATGGAGGGACTCGAAATATTGTCACGGCAGGTTCTTTACCAGCTGAGC Gene BVV0102_383824 + 0 NULL GK000009.2:33763838-33804518 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35648 CAGGCTTATCGCAAGGATGATTTCGTTATGTGTTCGGAAGAATCCTCAAACCAAGAAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09247 ACCCTGCTCCCCAAACTTGAAGCCAGGAGAAATGGGTGTCACAGAGCTAATAGCCCAATT Gene GeneID:527934|CORO7:NM_001075903:216_cdna Constitutive 0 NULL GeneID:527934 25 GENE CORO7 NULL coronin 7 EMBV3_20349 TTCCCATTGTAGGCAGAAGCAAGGACACTAAAGAAAACTGAAGGGCTGCATATTATTGCT Gene BVT0102_448000 + 0 NULL GK000022.2:10790071-10814074 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24420 GCTAGATCCCACATGCCTCAACTAAAACATCTCGTGTGCTACAACTAAGACCCTGTGCAG Gene GeneID:539767|RASSF5:NM_001113760:97_cdna Constitutive 2 NULL GeneID:539767 16 GENE RASSF5 NULL Ras association (RalGDS/AF-6) domain family member 5 EMBV3_26673 GAGCTCCTCACAGAGAAGATGGAAGAGACAAAGGACAGACTCACTGAAAAACTGCAAGAA Gene GeneID:511554|C24H18orf19:NM_001080259:83_cdna Constitutive 3 NULL GeneID:511554 24 GENE C24H18orf19 C18orf19 MGC143384 chromosome 18 open reading frame 19 ortholog EMBV3_15180 CAAGAATCCCGCATGTGTTTGTACCAAAAGCCCTCACATGGCCTGTACGTGAGTGTGATG Gene BVT0102_223824 + 0 NULL GK000001.2:145610048-145687666 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005544 1 XLOC_001296 Coding TCONS_00005544 XLOC_001296 Coding Coding ICOSLG 1:145684326-145695968 j TSS2748 4356 1 TCONS_00005544_1 305 7 0.626406666093978 1.56171973808336e-05 1.26119062414096e-33 0 9.53185154632934e-06 0 0 0 0.00048474604644419 0 5.52516471960371e-05 0.000462591177889874 3.36554506408427e-05 6.5869608067644e-07 0 1.40196204166371e-12 0.00145751078408338 0.00146737406478423 0.00113078000632395 0 2.80538723031341e-12 6.2244362543106e-33 0.00132241996738252 0.00171539478797485 0.00150146594601322 2.86301817397158e-05 0 0 0.000601977475949914 0.000404191357096887 0.00100756207028496 XM_005196002.1 ICOSLG PREDICTED: Bos taurus inducible T-cell co-stimulator ligand (ICOSLG), transcript variant X2, mRNA. 0.0 7826 100.00 0.995867768595041 NM_015259.5 ICOSLG Homo sapiens inducible T-cell co-stimulator ligand (ICOSLG), 2e-151 542 71.32 0.256198347107438 TCONS_00005544_1 sp|O75144|ICOSL_HUMAN ICOSL_HUMAN ICOS ligand; 8e-111 328 60.97 0.99672131147541 4 coding 0 0 0 0 -0.0174711756919565 0.916045864623676 -0.0104893829757972 0.84874051196494 CAGGGCCCAGAGCCTCCGAGGCGCGGCGGGAGCTTGGCTGGTGTTGGCCGGCCGCTCCGAGGGCTCCCGCGGCCCGAGGTCGCCCGTGCTCGGAGTTTTCCCGCCGCCCGAGACCTCCCTCTGGCTGCGGTCTCTAGCGCCCCGAGATCTCCGGGGCGGGCCGCGGTCTCCGCCCCCACCATGCGGCCGAGGAGTCCTGGATTGTTCCTGCTGCTGCTCTGGGGCCTGCAAGCCGAGAGTCAAGAAGAAGTCCGAGCGATGGTGGGCAGCGATGTCCAGCTCCGCTGCATTTACCCTGAAAAAAACAGCTTCGATTTAAACGACCTTTACGTTTACTGGCAAATCAGCATGGCGGGCAAAGGGAATGTCGACTCCGTGGTGACCTACCACCTGTCCGGAAACAGCTCTGCCAGCCACGGTGATAACCACTACAAGGACCGGGCTCGGCTGTCCTTGGACAGCATGAAGCAGGGCGACTTCTCTCTGCACCTGCGCAACGTCACCCCCCAGGATGAGCAGAAGTTCAACTGCCTGGTGTTTCGGAAGTCCTTGGAATTAAAAAAGATTTTGGAAGTTGCGGTCACGCTGCACGTGGCAGCAAACTACAGCATGCCTGTGGTCAGCGGCCCGTCCCAGGACGAGGAGCTCACCTTTACGTGCACGTCTACCAACGGCTACCCGCGGCCAAATGTGTACTGGATCAACAAGACGGACAACAGCGTGCTGGACAGCGCCCTGCAGAATAACACGGTGTCCCTGAACGCGCGGGGCCTGTATGATGTGGTCAGTGTCCTGAGAATCGGGCGAACCCCCCATGTCAACGTGGGCTGCTGCATTGAGAATGTGCTGCTACACCAGAACCTGACGAGCGGCCAGACAGAAACGTTCACGGGAACCAAGGACAGCATCACAGAGGACCCAGTCGATGGCAGCCCCAGCGGGAAACACCAGCAGGTTTTTAGCGTCCTTGCCGTGCTGGCCGTGATCGTGCTCCTGGCTCTCGCCACGGGCTGGCTGTGCAGGAGCAGGTGTCCACCCAAAAGCCAAACAGGTGCCCAGGTTGCAAGGCCAAAGCTAGCTCTCGCAGAGCACGTGTGATGAGGGACCCCCCAGGACGAGGCCAGGGCTCCCAGGAGATGCCGCCAGCTGGGACGTCGGATGGCAGCTCAAGAACTGACTCGGACAGGCCGGGCAGAGTGGACTATCTCCTCCAGAAGCTCGGGACTGCATGGACACTGGCCTCCTGGCATTGGGGGAACATGAAAGGCACCCTTGAAAGGACCACGCTGATCCCGGGAGCACGTGCCAGCTGCTGCCCTGATCCCAGTGAACCTTTCAAAAGTTTGGCATGGTGGCTCCCCAGGGCTACACATGCCCCCAAGTAGGTGGGCCCCCCACCTTTGCCACCAAACACAGAACAAGAGAAGGGCCATGACAGCTCCTTCCTGCCACCAGCTCCGGACCCGACTCGCTGTGGGATGAACTCCTGAAGCTGGAGGAAGAATGTCTGCTCCAGGAAGAGGTGTGCGAGAGCCCTCTCTTCCAGATGACCCGTGCTGGGCAGTGGTCGCTCCAGACGCAACGGCCACTCCCTGGGTCTGCGTGTGAGGCTCCCACCCCACTTCCAGCCCAATGGCCCCGTGTCTGTGTGTGTGTCCTGAAGCACAAAACAGGAAACACTGGAAAGCCCCCCTGAATTCACGTCTCTCCAGGATGCTGACTGGGAGGAAAACCCAACCTCCTTTGTTTTGGTCAGAAGCTAGTTTTCCCTCCTCAAAAGCACGTGGAATTTTAGGAGAAGCTCTGTGCTGGGCGGAGCAGCTGGACAGGGCAGCCAAGGGCTTGGACTCTACGGCAGGGGACACCTGGGCAGGTCTGGGACGAGCATTTCCAGTGGACACCAGTGTGGACAGGTGACCGTCATGGTCCTTCACTGTGGGGCCATGAGTGGACAGAGGGTGACCTCCCGGCCACGGCAGCTTTTCTTCAAACACAGCAGACATTTCCTCAAATCTCGCTGGGCAGCCCCTGCTAGCCTCTCACCATTGCCTGTGCCCCCACCTGCCTCCCCTGAGAAACTGCAGGGTCATGGCAGCAACCTTGCCTCAACCAGGGGGTCCCTGGAGCCCACCAGGCCCACTGAGTGACCGGAGTGGAGCCATGGCCAAGTCCGGGGGCAGGCAGCCTGATGCCCTGCCCCCGCCCAGGTGGTTTCCATGTTAATTCCGGGACTGCATCCAGCAGTTCAGTGTTCCCAGCAGGTTCTGTGACGGAGTCTGCCAGGTTGCCTGGTGGGCGCCTCCCCCGCGCCACAGGAAATGGGCCTGTCGCCCTGTGGTTATTCAGCACCAACGGGCATGTGAGACCTGCACCTCCCAGACCCAGACTTGCAGCAAACTCAACAAGGCGGCTTGGCGTGGATTCTAAGCCAACAGTGTTTCAAGAATCCTGCATGTGTTTGTACCAAAAGCCCTCACATGGCCTGTACGTGAGTGTGATGTGGGATCCACACAGACTTTTAACATGAAAGCATTAGAAGGCATGTGTGGTTCCTCAGAGAATGACAGAAAGGTGACTCACGGCATCTCGAGCAAGAAGCCGGAGCGGCAGGTGGGGCCGGGCAGGTGGGAGCAACCGAGTGGATACGGGCAGATGGGCGTGGCCTGTCCACAGTGACTGTGCTGTGACGCCAGGACAGGGACCCAGGAGGGCTGCTCCACCACCCTGCCGGAGGCCTGGCCAGCAGACCCTGAGCAGCCCCTGGCTGGAGGGGTAGGGAGGGGGCATCTCAGCCTGGCAGGATGGTGCAGCTGCAGGGAGACCGAGCCTGGTTCCAGGTTTCCAATCAGAAGCAGTTTCATTCTTGGGGAAGCGGCAGGGCTGGCTCTCTGGCTCAGGCCCACTTGACACCCTGGCCCGGGAGGGCCCCTAGGGACTCTCTCCCACTTGCTTGTGGGCTCTGCCTTGGCCCTGGCCTTCCCGAAGCTGAGGCCACGCCCTCCAGGCTCCGTGCCAAAGTCATCATCTTCTGGCTGGGCTCCGACCGACCCTCCTGGCTGCCTCCGGGCCTCTGGGGCCACAGCAGTGCCCTCTCTGTCCAGCTCGCACAGGTCACCCCGGCCAGTTCACCCTGGGGCCTCTGCTTGCGTCTTAAGCTGTATTATGGATAGCATGTGAGTGCCGAGTTTTGACATTTTTGGAAGCCTGGTTCCAGAGAATATAAGCTCTTGGCATGCCTGGGTCCAGACACTTTGGTCAGCATGCGGACCAACTCAGTCCACTTGGCCAGTCCTGACTGCGGTGGGGGACCCGGCCCCTGCCCTTCCAGAGTGGCCCCATCTCCCGGGGGACATGGGTCAGTGTGGAGGCATTTGGTCACTCTTGGGGGTTCCTACTGATGGTGGGGGGGTACTTCTCAACGTCCCACACAGATGGGGTCCTGCCCAGAGGTCAGTAGCCAAGACCGAGGATCCCCATGTCACCTTTCCTCGCAGGGCAGGACAGCAGAGCTGCTGTCGGGGTCCCCACCTGCATGGGGTACAGGAGAGGTGACTGATGGTTCACATTCCAGGTCAGGGGCTGGGCACAAGTCCGGTGCTGGCATTGCCGTGGGTGGAGGCCACAGGCTGCAGGAGTCTGGTCTCTGGGAGCCTGTGGCCCCTGCCCCCTCTTCCCTGCACAGAGCGGATGTGCAGTGAACACCTGTCAGGGAGGTGGAGCCCGCTGATAGGGGGAGGCTCGTTGAGAGGGCAGAGGGCAGAAGGGAAGCTGCGTGACCAGCACGCCCCAGTTTCCTTTCCCACAAAGCAGGCAGCTGGAGCCTGGTTCTGCCTCCCCGGGCCCTGCAGCTTGGACACTCTCCGTGACTGCAGCTCCCACCCTGGGAAGGGCAGCCTCAGGAGAGGGCCACCCTGCTCTGCCAGTGCCCATGAGGCCCGGGTGCTATGACACTGGCTGCTGGTTGGGCCGGAAGCTGGCAGGCGGCTCAGGACAATGCCGAACAGGCATATCCTGTCTGCATCTCCTTCCAAGTCCCGGCTTCTCAGAAAGAGGCCATTTCCAGTCAGAAGGCGCTCACCTGGGACCATTCCGTCCTTGGTGACTGGCGCCCGTGCCCACGCTGGCCCAGCCCAAAGATAGTCCCCCCAGCGTGGTCTGCCCTGTGTTCCCCACTCTCATCAGGCCCACCGGCCACTGCTAACCGCCCGTCTGCTGCATTCCTGAATGTTCTCCAGCCCTGACTCAGCACCCGCCCCCGCCACAATCCCCAGCTGCCCAGGGCTCCTTCCTGACTCCCGAGTCCCATGGGGAGAGCCTCCTTCGTTACTAGTAAACACGGCATACTTTCCTCGAATC EMBV3_22282 CAGCCTGAGCTGGATCCATTTCCAAATGATGGGCAAGGGCAGTAAGACAATCCACTTCCT Gene BVT0102_065840 - 1 EMBV3_42944 GK000003.2:66769752-66795565 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31123 TCAGAATGCTGACAGTCCTCCTCCTCCTTGATATCAAATATGCCGTCATCGGGACTGCTG Variant GeneID:783944|LOC783944:XM_002698966:110_cdna 76^129 1 EMBV3_23219 GeneID:783944 28 GENE LOC783944 NULL hypothetical LOC783944 EMBV3_33945 AGAGTGACATCTGAGGACAAGGAACCAAAGGAGCAGCTTCAGAAGGCCATCAGGGACCGA Gene GeneID:536747|CCDC64:XM_002694595:688_cdna Constitutive 0 NULL GeneID:536747 17 GENE CCDC64 NULL coiled-coil domain containing 64 EMBV3_29307 AATACCTGAAGATCAAACCATCTGGCTCAGGGCTCACCAGTTAGAGGGGTGAAGGGGTGT Gene BVT0102_174848 - 0 NULL GK000011.2:19302493-19337617 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027082 TCONS_00027087 TCONS_00024285 TCONS_00027084 TCONS_00027081 TCONS_00027085 TCONS_00027080 TCONS_00027083 TCONS_00027086 2 XLOC_015183 XLOC_014470 Coding TCONS_00024285 XLOC_014470 Coding Coding - 11:19307721-19337547 - TSS17859 9027 3 TCONS_00024285_13 83 0.0654702558989698 2 0.697401508801341 0.00176710180743432 0.00166883746103955 0.00138797515643543 0.000767177665110942 0.000967645182175563 0.000645089334881916 0.000908901994440108 0.00109612183155512 0.00138099298445243 0.000237249288178205 8.0566398456387e-05 5.86178249167848e-05 6.89024577346336e-05 6.14744976266205e-05 4.78672717310854e-05 0.00107529371924543 0.000748204890481532 0.00158178769939495 0.00121052445844392 0.00170508171985423 0.000713384678784834 0.000756302158426587 0.000729934602099319 0.000866405093328582 0.002383318610233 0.0022006002304931 0.00141089244430311 0.000152407054539221 7.21113616721918e-05 0.000100490549922674 XM_005212646.1 STRN PREDICTED: Bos taurus striatin, calmodulin binding protein (STRN), 0.0 6235 100.00 0.382851445663011 NM_003162.3 STRN Homo sapiens striatin, calmodulin binding protein (STRN), mRNA. 0.0 4536 78.90 0.590007754514235 0 coding 0 0 0 0 0.00151330328796533 0.991988410770629 0.0234768477929208 0.658337835377333 ATGCGGCCCCCTTCAGCAGGGCCCCCCAGCACCCCAAGCTGACACAGCAGGCTGCAGAGGAGCATTCACATCGTTTTGTCCGATCACCTTACACAATTAAGCTGTTCAGCTCAATACCTCAAGCCTCCTGGGCCCTGATGGAGTGGCAGCTACAAATCAAGACAACACAACTGTTCCTAGTAGTTGGAATAAACATTTAGATAATTGCATCAAATCTTCAAGACAAAAACAGCACTAAGAGCATCCTGAGGGATTTTGTTCTACACTCCCCAGAGGAATGCCTTTCCTGACAACGTTCTACTAGAGGAAGCTTCCTACCTCTTTGGAGAGAAAAAAAAGACAGGCAGAGCAGGACTATCTGCGGGTCACAGGGGAAGAGTAGTGCGTACAGTCTGGGCCCAAGCTGGCCAAGGCAGGGTCAGCTTCCAGGTTGGAGAGTCCCCTCTCAAGGCATCAGAGGCCAGTGGGTTAGTGTTCACAAGGTTGAGGGGACAGAAGGGACACAACAGGGCTTGTAGAGACCACCTACTTCCCTACATGGTTCGCTGAGGTTCAAAGAAGGCAAAATTGGAAACGGACAGTAGAAGAGGGAGCTTCTTGGGCATTCTGTTGTCACCTTCCAGGTGAGGTCCGAATTTTTCCCAAGGAAGGTGCAGACCTAATCTGAGCATCAGCTCCACATACCTAAATACACCTGAGATCACCTAGGGACTGGCAGGGACACTTCCCCCGATCTCACCTTTGTCTTTGATGTTCTGGATAGATTTAGAGTTTTAATAAGTGTTCTCCAGTCACTCAACCAATAAATATTTATAGGGTACTTTCTACATGGTGAGGCACCAGGAGAGGTGTTAAAGGGAATATAAGAAAAAAAAAACATGGTCCCTGCCTCAAGGAGCTTACAGAGACAACAAAGAGTCATCACCTCTTATTTTTAGGTGACAAATGAGCAATAACTAATAGGTAAAATCCGAGTTGAGAATGAGTTTAGAATCAAGGCATTCAGAATAAAACTCATCACTGCCTGTTCTCCATGCCTCAAAAAAATCCACAAGATTTTGAAAGATAATATGTGTAAATCAGACTTACTGTATCTTCCTTGCGAATCTTTGTACCCTGAAAACAATTTCTAAAATTCACACAAAAATAAAACATGATTATCTGTAGAGGCAAACTATATGCAACTTGCATACATTGAGGGTATAAAACTGCCTGGATCTATAATCTTAAAGTTCGAAAGTAAAATTATTTCTGCCTCCAGAAAGCAATGGTGTTTCAAAAGAGAAAAAAGGTCTGCTTGCAAGCTTTATTTTTTTAAATTGCATCAATACATATATATTTCAAGGTATCTCACAACAATGAGAACTAACTAACTTATTGTCCTGCTTGTTTAAAAGGCTATCAAAGGAATAAGAGGAAGTCTGAAATGTTCTAGAGCTGAGAGAAAGCCTCATTTCTTCTGACTCTGAGACACACAAGGAAATTGAACAGGCACTATTTCATTGAAAAACAAAGTGTCCACTTAAACGAACTGATTTTGGCTAAACATGCGTATTTTCAAAATCTGTGAATGGCAGGATCTAATCTGGACCTCGTTCACTCTGAAGGGACACAATTAACATTATTTATGTGCTACACATGCTCTATTTTAATGCTCCATGCATTTTAACACGCGTCAAATGCACAAGGCTCCATGGTTTACCTGCAAGCTATGTATAAAAATACTGCTTTTCCAGTCAGCAAAATGCTGAGATATTTATAACATATGGAAGAATTCCTACATGGCACTTGGGTATTGGTGGGGAGTGAGGATCAGGAGTGTTATCCATAAATGACTGTCAGAAAGACATATGAGACCACTCTGTTCTTTTTCTAAAATATACACTGAGTGAAATAACTCCATCAATAGGATATTCTGAAACATGTGGGCTCAAAGTCTGTAGAAAAAGATAAAAATATTTTTTTTAATGATTCCAAAAGCACAGTCAGAATCATACAAAATAGAACTCATCCTATTAAAATGATTCTATCTTTTCATGAGATTACTACTTGGTCCAATTAGGACATTTCTTACGTGTCTGGTCTTCCTTCTGACTTATGCAGATGACACGGTGTACCTGGGCCTCTCTTAATATAGCTTCCTACAATATAATAAAAAGTTATGTCACCTGACAGTTTGTTTAACCAGGGAACTCCAGGATATTCTGATGTATTTCCTAAAAATTGTTAATTTATACAACAGGAATCAATGATAAACAAACCAGAACTGGAACCATTCACTTTGAGAGACCGAAATGACCTTAGAGGCCGTCTTTCCAGGCCATCTAAAGAGAAAGGAAAACAATGGGTGATGCATTCAGATCAGAGGCTCATCTTCCCCTATGCTCTCAAATTATCCGACACCCAGAACAAACTTTCTGATGAATTTCTTTTGCTCTAATGTAAGTTAACCTTATTTATTTATGAAAAACTATTGCCTTGATTCCTGAATATTCACCGGAAGGACTGATGCTGAAGCTGAAGCTCCAATACTCTGGCCACCTGATACGAAGAACTGACTCATTGGAAAAGACCCAATGAGCTTCCAAATCTTGGAAAGACAGGGCAAAAGGAGAAAAGGGTGACAGAGAACGAGATGGTTGGATGGCATCACCGACTCAACGGACATGAGCTTGAGCAAATTCAAGGAGATGGTGAAGGACAGGGAAATCTGACATGCTGCAGTCCATGCGGTCGCAGAGTTGGACATGACTTAGCAACTGAACTGCCTTGATTCCCTTCTGTAAGGAAAGAGTAGGTGGATGTCAGTATACATTAATGTTTCAACACTTTATGTAAACCACAAGCTGCTTATTTTCTTAATACATGCTTATGCCTAACACTGAATTTTGCCTTCCATGAATGCATTTTTTAAAAATCAAAGTTCTTCAGTTTGCGAATTCTCATTTGTGAATGATGATGGGCTTCCCTACCATTACCCTTATTTTGATGGTGCTATTATATGAGGTAATTAAAAAATATCTTTGGTTTGAGGTTATAGATTGGGAACCTGATACACACCCTAGATCTTATGAGGGCATGAAAAACTTTGGCACATGAATTAACAATACTAACTCTAGTACTCTAAGTGCTATTTAACAGATGTTTTGCTGAGTGTGTGTGTGTGTGTGTGTGAGCTGCTCAGCCGTGTCTGATTCTTTGCAACCCCATGGACTATAGCCCACCAGATTCCTCTGTCCATGGAATTCTGCAGGCAAGAATACTGGAGTCGGTTGCCATTCCCTTCTCCAGGGCATCTTCCCTCCCTGGGGATCAAACCTAGATTGCCGGCATTGCAGGCAGATTCTTCACCGTCTGAGCCACCAGGCTAGCCCACTGGATTAATTATCTCTTTAAGCATCTAGACCAGTCATCCTATAAGGTGACTGGCTAAAAAACCAGGGACAAGAGAATTTTCTATGAAATATACCCTTCTGATGGGAAAGATACTGCAAATTTTATTCCTCCAAGTCTGACCAAAACCACCATTACCTTTAATATAGTATCAACTAAGTAATAAAAAAGGGCTCAGGGTTCTGTAAGATCTTAGTGAAACTTTAAGTAATTTTCTGTTAGGCAGGTTTTGGATGCTGTTTTGTTTTGAAAAGTATACAAAATATACTGAAGTTTGTGTTTTGGAAAATATGGAATCTAATTTTAAGAGTTGCATGCCAGTGCTTCTCCATAGAACTCAAGCGTCCCATCATCATAAGCAATAGTTATAACTGAGAAGTAACAAGTGAAGTGATGCATTATGGTTATAGTGTTTGAAGTGGTGCTACCAGACTTCCAGGTGTTCCTGGGGGAATACTCTGGTGCCAGGACAACCTAGGATTCCTTAAAATCTTAGTGGTGCCTTTGGGAAACCCAATGGAGGTTAAAATACCACGGTGAACCTGGGCTGACCCCAGTGGGTCCAACAATCCATGAAACACTTCTGGAGCCATCTTGACCTTCTGAGCTAGATTACTCTACAGTAACTCCAGCAAATCACGGCTCAGTTCTCATTACAAGGGACAAAAGAGACATTTCTGATAATACTGAAGCACGTGTACATACCAAATAGAACGCTACAGCAGCATACAAAACATCACAGAACAGTGGATAGTTTCAAGGACACCAGAAGAGGTGCTTTTTAGATTCTGTATAGTATTGTGACTCCAGATTGGAACAAAGAGATTGTCAAGCTCTGGGCAGGGGGAGCCCTTGAAAAATACTGTTGATTTGAAGGTGCAAGGGGCAGAAGGCTTATGCTTTTTAAGTAGCCAAATAAAAAAATAAGTAAAAGCACATTAAATTTATATGTGTATGTGTGTATAGGATTTTTAAAATTATGTAACTGAATATTTTAGGAAAAATATATATGTGTGTCCCTAAAAATATCATGATCCAATTGTGTGGGGTATTTTAATTTTACTGGCTTTCCAAAGGTCCAAAGTTTCTATAACAATAAATGTCTCCATCTTCCTTACAATCAATAATTAAGATTGGTTCATCTCTGTGGATTCACATCTACTTTACCTAATACACTTTTATTTCTCTGCACCCCTTTACCACCTCCCCCCCAAACAAAATCAAGTTGTATTAAAGTATTTTAACTGCAAATCCACTAGATTCCATTCTGACAAATATTTCAATTCATGAGACACCTTATCTATATTTGTACACTTTATTTAAAAACAAATAATACACTTAGAGCCACCAAAAAAGGATATCTTAATTAGCTTATCCATATCCTGAATTTACAAGAGAAACTTCTTGCACCACAAAAATTAGCATTTGGATTAATTTACATTAATTGATATTATATTTAAATTTTAAAATACCTGAAGATCAAACCATCTGGCTCAGGGCTCACCAGTTAGAGGGGTGAAGGGGTGTGGAGAAAAGGAGCTGTTTAGGAATCTGAACTGATGCCCTGAGGTCAGCTCTAGTAAACTGAACTTGAGAAACATAAAACAAGCAGTGGATTACAGGATTACAAAGAAGTGGTTCTTCCTAAAAACAAAAAACAGGTATTAGATTATATAGTTGGGATAGGTATAAAGGGTATCTCTTAATCTGGATTGGAAAAAAGTTATGAGAAGGGGGTTGCATTTATTTCTCACAAGAGGTAAATTTCAGCCAAACAATGAGAACAAAGTAGGGAGGGTGGAATGCGGTAGACTGAAGGCTTTCTGATTGCTGATAATACCAAATCTAGCAGCTCTCTACAAGCCAACTAAAATACCGTCCTCTGAGAAATTTTCAGAGAGGAGCTAACACACAACCAGGGAAAAACCATTCTGCATTAACAAGGCACTCACTGGTTCACGGCCTGCGAAAAACCCAGGCAGACATCAGAGTTAATCTGAAATAAAATCAACTTTCTAATTTGCATCAGAGGGATGACACGCATGTGGTCCCAGTTAAATCAAATCTAAAGCTTGACTAGCAAAGATCCAGGAAATTCTGACCCTTAAGCACCACTTCAGGAATACTGCTAGAATAAGTAAGTGGGATCTAGAGATCTCTGTTTGGCTTTATATTTGCTTTTTTTGGATTAAAAAAAAAAAAAAGATACAGTCTGTTTGTGAACAGACTTTGTGAACCTGGTGTCCCGAGGAATGACACTGAGATCCAGCTGGATGATGGATATATGGCCAATTAAAAAACTTTCAGGAGCAAAAGTCAAATGCTTCAAATCATCTACAAAGGACCTGACCTTTGTTTTTAAACACGGATATGTTAGTTTTCTGGACCTTCCTCTAAAATGAATTTAAGGAATTGATACATTTCAGAAAAATATACATACAATTTCTGTCAGCTACTACTTTTGTACAACCTGAATCCCAGTGTTAAAACAAAATACTGCAATTATATAAATAACTAAACAAGTAACACAGTAACAGAGACAACTTCTGAGCAAATAAAATGAGTGATTATGTACTGAATAGCCTTGAAACAGCTTTCAAAGAATAAAGTAAGTTGAAGGAAATCAGAGCTCCTTTCCCATGTAAATCAATAACAACTCGGCTCTTGGTTGAAAACATCACATAGACATATACTAACCAGAGATTATCTCCAGCTCACTATCAACATGGATGACAAATTTTAAGCAGTTCTTTCAAAAGAAAATCAAAATTAATTCGAAGCCTTTCAATCTGATTTGTGACACCTTTGTTCAATATAACTTAAATGACATAGCCTGAGAAAAGCACCAACACAGATTTTTTAAATTGCATCCAACCATTATTTTCGATGTCATAAAGATTTGCTTGAGTCAAAAATGGCAGCAATGACAAAGAGGTAGATATGAAAGATGCCATTTAAATACTATTCTTAGGTGGAATTTTAACTAGTTCAGGTGTTTAATTTAAAAACAATTTTTACTAGTTGAATCTTCATCATATAAGAATTGCATGACATGCTCTTGTGTAAAGGGGAAATAAATGAAGTACTAAAAAAAAAAATGAGCCTTTAAAAATTACATTTACTTAGCTAACATTAATGAGAGCCTGTAATTTTGATGAATCAGTAATATCTCCTTTTACCTGAACTTGATTTATAATGAAATAATAGTTATTTTCTTCTCTACTGAAATTTCTAGGAATTCACATTCAGAATTCTTGGAAAGTACTTTTGGTGCTCAGAAGAGCACGAAGACAGCGCATGAAATGTCCCCTGAAGTCCTAGAAGTTTTACAGACACATTAAAAAGACACTGATGGTCACAAATCAGGACCTTCACAGATGGGCAAACATTCAAACATCACGACACACACACACACACACACTCACTCACTCACTCACTCACACACTCTCTCATACCTCTTCCCCACAAAACAACTCAATCCTCATCCTCACTGTAAGGCTGAATTTGTATTTTTTTTTTTTTAAAGGCACCTCTCTTTCTCTAGCTATTGCCTTCTTGATGATATCGGTTTTGTCAAAAATCCTGAATGCTCAATGGAAATAGTTCAGTACTGAGAATGGAACATTTTTCAATTCACATTTGAATAGCCAGGTTTTCTTACATTCAGATTTTAATAAACTAGAATGACAGTCTTTAAAACAAGCATGCTAGCCTATAATGAATATCGTATATACAGTAATTTAAACATTTAGAACTATATATTATACTGCAAAGCAAACAGCACAACACTCATCATACTCATCATTACCTGCTGTGGACACTACCTCCAAAAATGAAAATACAAAACAGTAAAATGCACCTATGGTTTTATATATATATATATAATATATAGTCTATATATATTATATATATCCCTACAATATATATAATATATATTTATAAAATATACATACATTTTAGACATTTTCAAATAAATTTTTGTCATTATCTCCAAAAGAAACTTATAGCAAGAACACTGAAGGAATGAAACTCAGATAAACAAAAAATTTCTCACAAAGTTCATTATCAGTGATACAGCTCAATTTCCCCCCTTTTAGTCATAACTAAAATGATTATAAAAGCTAAATACTTTGCATAACTAATTAATCTGTTTAATGGCAAAAACTGCTAAATGTGTTCAATAGAAAAATACTGAAGGTCATTATATCACTTATGTTAAATATCTGTCTATGGTTTGAGTAGCAAATGAGCTCCATATGACAGAGGAGTTTCAAGAAGGGTGCTGCAAGCTCCCAGGGATGTACCCATAGCATATGAAAATAAGGCAGGGACCCACCTCATCTGCTGATTTTCATACTCTTCCAATACATTTCACTCAAAATATTTACAAATAAAGCACTCTGAAAGCATTTCAATCATTGTTCAAATCTGGGATTTGTTCATTCTGTCAATTTTCATTGAAGTTTTGACAGGCTGATGGAAAAGTCAGACAAACACACACACATATATATGCTTCTATCTGGTTGGAAGACAGCTTTGGCTCATTTCTAGGCTGAGATCGTAATAGTGCTAGTGGAGAAGAAATCCCTGTTTCTGGTACAACCTCCAAGAGCACAGCATTGGCTTTCTAAGGAACTTTCAACAGTTCCATCATTTGCACTACAGTCTACATATCTCATGGTTATTTTCCACTTACTAATAGAAAAATTTCAACCATGAGACCTAAAATGCAGGTGAAGAGAGTGTCTTAGTTTTGAGAATTCCAGTTGACAGAAGTAAAGCAGGCACTGAACACCCTGGAAGGTAATTAAAGCAATAATTGGTAGAACAATAGCTTGTAATCATCCATCACAAATATGCCAATTAAGAGCACCTGACTGAAATTTTCCAGTATCCTTCTACAAATGTTAGGTCAGTGACATAATTTATTTACTTTGTGAAGAAGCCAAAAAGGAATTCACCAAACACAACGTGGAATTCTATACCCGCACAGGAATATAAACATTTACCTGGTAGCTCATGTCCAGGTCAATTCATTTGAATGTACAAAGCAGTCCCTTGAGCCCATTGTTAAGCACATATAAAATGACAAGGTAGCCGTGTCAAAATAAAGCATATCTGTGTATCAACCAGGAAAATTTAACAAAGGTCCTTAAAGAAAATCTGCCTGTATACTGCAGAATTCTAGAGGCAGACAAGCAGAAATTTTAAAGAAAAATTGTCAATTAATATCCACACTATCATGTTAATACTTCTTCAGGGAGTAAATGTACGTATTAGAAGTGCCATTGCTATGATAATGGAATATGTGGCATAGGAATGTAGAAATTACATCTGAGAGCCAAAGTACATTTTACTGAAAATTTGATAATTAGTAAAATTTCTGATTTCCAGATTGGTCTCTGCCATATTGGGCAAATAAGAAAGTGCATGAGGAAGAGCGGAGACAGCTGCAGGGATAAGGTCTACATACCATCTCCAGACAGTGGGGTCACATAAATCCCAAGAGCTAACCCTATGTGGGTCATTGGTAAGGTGAGCTCAGAGAACCCCAGGCCTTCAAGACATGGTTTTCCTCAGAAACAATACTGACTCACTGCCCATTAAAACATGCTATGTATTCCAATGAAACAC TCONS_00027087 r 5' 0 TCONS_00024281 s 3' 2081 EMBV3_35402 TATACCTTCAGGCAAAATAATCCCCGTTATGCGCCCCTCTCTGGTGCGGCATTCTTTGTG Gene GeneID:508233|RELA:NM_001080242:539_cdna Constitutive 0 NULL GeneID:508233 29 GENE RELA NULL v-rel reticuloendotheliosis viral oncogene homolog A (avian) EMBV3_01037 AGTGAGAGCAACGTGGCCAAACTGACCAACATCTACCGGGACCAGAGCTTCATCACATGG Gene GeneID:506709|C9ORF59:NM_001038508:40_cdna Constitutive 0 NULL GeneID:506709 11 GENE C9ORF59 NULL chromosome 9 open reading frame 59 EMBV3_13455 CTGAAGCTCCTATGTTCACGACAGACCCTCCCCCTGCTCTTCAGACATAAGGGTGTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28730 AACACTCATCCCCCCTCATCCACATCTTCATGGCTCATATCTACCTGCTAGTTCCACCTG Gene GeneID:783616|LOC783616:XM_002693234:482_cdna Constitutive 0 NULL GeneID:783616 15 GENE LOC783616 NULL similar to MOR 3Beta4 EMBV3_30572 TTTCCTCTCTTTGAGATGTCATGCAGCGCTGTTGGTGTCCAGTTTCTGTCCTCAGTACAC Gene GeneID:541277|TSC22D2:NM_001144101:56_cdna Constitutive 2 NULL GeneID:541277 1 GENE TSC22D2 NULL TSC22 domain family, member 2 EMBV3_41883 TCTTAGTCGACATTTTTATGGTATCCAAAGGGTAGGCGAGGAGGGAGCTAAGAGCCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29264 GGCCCGACGGGGTGGACACGGATAACTGCATTAGACGCACTCAGCTCTTTTCAATAAAAA Gene BVV0102_282660 + 0 NULL GK000010.2:81890830-81957652 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03310 ATCGGAATGTATGCCCTGCTGGGGGTCTTCTGCCTGGCCATTTTGGTCTTCCTCATCAAT Gene GeneID:100297935|LOC100297935:XM_002694460:74_cdna Constitutive 0 NULL GeneID:100297935 17 GENE LOC100297935 NULL hypothetical protein LOC100297935 EMBV3_23685 TGCTTGGGTTTTGGAAGCCGCATCTCATTGGGGTTTTAGCAGACACGCTGAAGTTGGGAT Gene GeneID:535376|TGFBR2:NM_001159566:164_cdna UTR3_Alt 2 NULL GeneID:535376 22 GENE TGFBR2 NULL transforming growth factor, beta receptor II (70/80kDa) EMBV3_21155 CATATGCCTTCCTGAGCATTCTGTGAGGAGCGTTGGACCTGAGACGGGTCTGTTTATTCA Gene GeneID:100296695|LOC100296695:XM_002692019:19_cdna Constitutive 0 NULL GeneID:100296695 13 GENE LOC100296695 NULL similar to X antigen family, member 5 EMBV3_30116 GGCAAACGACCGGGCCGCCACGGGCATGGTGGACCCAGCTCGGCTGAACGAATCTACCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08040 CCTGTAGCCTGTAGGATGGAATCCACAATCAAAGAAAGTCAGACAGAATGAAATGGCAGG Gene BVV0102_234965 + 0 NULL GK000010.2:82426806-82457176 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19342 CAGGAACAGAATCACCAGCACTGGCTGAAGATGCCCAGCCGACAGAGTCTGAGAAGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09297 AAAATGATCAAGCATGAAGTAGACATGCAGGTGGCAAAGGCTCGGCCAGAAGAGACAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16589 ACTCGGGCCGGGACTTCCTGACCCTGCACGTCTCCATCGAGGACATCCAGGAGGTGCGGA Variant GeneID:281986|PLCD1:NM_001081576:23_cdna 129^293 1 EMBV3_41966 GeneID:281986 22 GENE PLCD1 NULL phospholipase C, delta 1 EMBV3_12603 GGTGGTGCCTTGGTACAGTCTGAAAGATGCTTAAGGTTTGTGAAAGCTTTCAGGTATGGG Gene GeneID:541040|SEC63:XM_002690124:152_cdna Constitutive 2 NULL GeneID:541040 9 GENE SEC63 NULL SEC63 homolog (S. cerevisiae) EMBV3_28636 GTGTAGAGGTGGAATTTAAAGGAAGGTATTAAACAGGCTGTGTTTTAGCTTATGGGCAAG Gene BVT0102_142894 - 0 NULL GK000015.2:64758179-64982626 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059824 TCONS_00059839 TCONS_00059830 TCONS_00059825 TCONS_00059826 TCONS_00059840 TCONS_00059834 TCONS_00059837 TCONS_00059835 TCONS_00059829 TCONS_00059838 TCONS_00059828 1 XLOC_036521 Coding TCONS_00059825 XLOC_036521 Coding Coding HIPK3 15:64671710-64761673 j TSS44813 7608 1 TCONS_00059825_6 1195 0.0218191377497371 16 0.915608812609769 2.75817764205223e-108 1.87727949848219e-37 3.48050596593184e-177 9.15381773333785e-86 1.96311953998646e-80 8.1030645846316e-90 1.02976341557788e-72 7.62412031453337e-38 7.67493669358133e-20 0.000694524664196839 7.00841590135099e-05 7.78771686508897e-05 3.8599591857836e-32 2.2875966281508e-46 2.29461548789689e-21 0.00605402893687935 0.00124847301576293 0.00672024695986193 1.12886411491054e-75 1.16376647688758e-16 7.7713451816573e-13 0.00337382577835828 0.00200447195793499 0.00570012292072071 3.02475446893204e-179 1.71380120430904e-85 4.13652776377226e-95 0.000514267336966975 0.000553292165459007 0.000692205729847893 XM_005216298.1 HIPK3 PREDICTED: Bos taurus homeodomain interacting protein kinase 3 (HIPK3), transcript variant X5, mRNA. 0.0 1.270e+04 100.00 0.925473186119874 XM_005252728.1 HIPK3 PREDICTED: Homo sapiens homeodomain interacting protein kinase 3 (HIPK3), transcript variant X2, mRNA. 0.0 1.014e+04 91.97 0.925604626708728 TCONS_00059825_6 sp|Q9H422|HIPK3_HUMAN HIPK3_HUMAN Homeodomain-interacting protein kinase 3; 0.0 2286 92.76 0.999163179916318 3 coding 1 1 1 1 -0.0395519157625408 0.736338575826283 0.0167986581992684 0.810661838440091 ATAAAGTGGCTGGGAGCTCCCAGGAGGGAGGAGACAGAGGCTCCCTGCTGCTGAACCTCTCTGCTTAGAGTCCACTTTCTGGTGGACTAAGTGCTCCTCCCCCCACATCCCACCAAGGCAGGACTGGAAACCTAGGGTCTGGAGGAAGTCAACAATAACAGCAACAAATCTCCAATTTCTTTGAGGAAGGGAATGTGGGTTGCTGACTCGGGCTCTGACAAAATCCCAAGATTTTTCTTTTGGAGAAGTGTCAGCCTCATTCCCTAGGCCTGTTGGATTTCTCCATTTTGGAACCTATAGGAGGTATGGCCTCACAAGTCTTGGTCTACCCACCGTATATTTATCAAACTCAGTCAAGTGCCTTTTGTAGTGTGAAGAAACTCAGAGTAGAGCCAAGCAGTTGTGTATTCCAGGAAAGAAACTATCCACGGACCTATGTGAATGGTAGAAACGTTGGGAATTCTCATCCTCCCACGAAGGGTAGTGCTTTTCAGACAAAGATACCATTTAACAGACCTCGGGGACACAACCTTTCTTTGCAGACAAGTGCTGTTGTTATAAAAAACCCTGCGGGTGCTACAAAGGTTATAGCAGCTCAGGCGCCGCAAACTCAAGTGGAGGCACCTCAGATCGGGGCGTGGCGGCACAGGTTCAGTTTCCTAGAAGGCCCCCAGCGATGTGGATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAGGTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAACTACCACAGGAACCAAACAGAACTGTACCACTGGAGAAGGTGACTATCAGTTAGTGCAACATGAAGTCTTATGCTCCATGAAAAATACTTACGAAGTCCTTGATTTCCTTGGTCGAGGCACTTTTGGCCAGGTAGTCAAATGCTGGAAAAGAGGGACAAATGAAATTGTAGCAGTCAAAATTTTGAAGAACCACCCTTCGTATGCACGTCAAGGTCAGATAGAAGTGAGCATATTAGCAAGGCTCAGTACTGAAAATGCTGATGAATATAACTTTGTGCGAGCTTACGAATGCTTTCAGCACCGTAACCATACTTGTTTAGTCTTTGAGATGCTGGAACAAAATTTGTATGACTTTCTGAAACAAAATAAGTTCAGTCCCCTGCCACTAAAAGTCATTCGACCCATTCTTCAGCAAGTGGCTACTGCACTGAAAAAATTGAAAAGTCTTGGATTAATTCATGCAGACCTCAAACCAGAGAATATTATGTTGGTGGATCCTGTTCGACAGCCATACAGGGTTAAAGTAATAGACTTTGGGTCAGCCAGTCACGTGTCAAAGACTGTTTGTTCAACATATCTGCAATCTCGGTACTATAGAGCTCCGGAGATTATATTGGGGTTGCCATTTTGTGAAGCCATAGACATGTGGTCACTGGGATGTGTGATTGCAGAATTATTCCTTGGATGGCCTCTCTACCCAGGAGCCTTGGAGTACGACCAGATTCGATACATTTCTCAGACTCAAGGTTTACCAGGAGAACAGTTGTTAAATGTGGGTACAAAATCCACAAGATTTTTTTGCAGAGAAACAGATCTCTCCCATTCTGGTTGGAGATTAAAGACACTGGAAGAACATGAGGCAGAGACAGGAATGAAGTCTAAAGAAGCCAGAAAGTACATATTCAACAGCCTGGATGATATAGTGCATGTGAACACAGTGATGGATTTGGAAGGAAGTGATCTTTTGGCTGAGAAAGCTGATAGAAGAGAGTTTGTTGGTCTGTTGAAAAAAATGTTGCTGATTGATGCAGATTTAAGAATTACTCCAGCTGAGACTTTGAACCATGCTTTTGTTAATATGAAGCATCTTCTTGATTTCCCTCATAGCAACCATGTAAAGTCCTGTTTTCATATTATGGATATTTGTAAGTCCCATCCAAATTCATGTGATGCAAATAATCACAATAAAACTTCACTTTTAAGACCAGTTGCTCCAAGCAGTACTACTAATCTGGCAGCAAATTTTACTAAAATTGGCACATTAAGAAGTCAGGCATTAACCACATCTGCCCATTCAGTTGTGCACCATGGGATTCCTCTGCAGGCCGGAACCGCTCATTTTGGTTGTGGTGATGCTTTTCAGCAGACACTGATTATCTGTCCCCCAGCTATTCAAGGTATTCCTGCGACACATGGTAAACCCACTAGTTATTCAATAAGGGTAGATAATACAGTTCCCCTTGTAACTCAGGCCCCAGCCGTGCAGCCACTACAGATCCGACCAGGAGTTCTTTCTCAGACATGGTCTGGTAGGACACAGCAGATGTTGATACCTGCCTGGCAACAGGTAACACCCCTGGCTCCTGCTACTACTGCATTAGCTTCGGAGGGTGTGGCTGGTTCACAAAGGCTCGGAGACTGGGGGAAAATGATTTCACACAGCAATCATTATAGCTCCATGATGCCACAACCTCTTCTAACTAATCAGATCACTCTATCGGCCCCTCAGCCAATTAGTGTGGGCATTGCACATGTTGTTTGGCCTCAGCCAGCCACTACCAAGAAAAATAAACTGTGCCAGAACAGGAGTAATTCATTGCAGAATACCAATATCCCACAATCAGCATTTATCTCCCCAAAGACAGTAACTGGGAAAGATGTCCAGGAAGTAAGTTGTATAGAAACACAGGACAATCGTAACTCAGAAGGAGAGGCAGGAAATTGTTGTGACACGTCTATCAGGCAAGACTCTGATTCATCAGTTTCAGATAAACAGCGGCAAACCATCATCATTGCCGACTCCCCGAGTCCTGCAGTGAGCGTGATCACCATCAGCAGTGACACCGACGAGGAAGAGACGTCCTCGCAGAGACATTCCCTCCGAGAATGTAAAGGTAATCTGGACTGTGAAGCTTGCCAGAGCACTTTGAACATAGATCGGATGTGTTCATTAAGTAGTCCAGATAGTACTCTGAGCACCAGCTCCTCGGGGCAGTCCAGCCCATCCCCTTGCAAGAGACCGAACAGTATGTCAGATGAAGAACAAGAAAGTGGTTGTGATACTGTGGATGGCTCTCCAACATCAGACTCCTCAGGACATGACAGTCCATTTGCAGAGAGCAGCTTTGTGGAGGACACTCATCAAAACGCAGAATTGGTAACTTCTACTGACACAGAAACCAAACCAGCTGTTTGTACTGTTGTGGTGCCACCAATGGGACTGGAAAACGGATTAAATGCCGATGAGCATATGGCAAACACAGATTCTATATGCCAGCCATTAATAAAAGGACGATCTGCCCCTGGAAGATTAAACCAGCCTTCCACAGTTGGTAATCGTCAGCAAAAATCGACATCAGCATTCCAGCAGCAGCATTTGAATTTTAGTCAGGTTCAGCACTTTGGGTCTGGGCATCAGGAGTGGAATGGAAACTTCGGACATAGAAGGCAGCAAGCTTATATCCCTACTAGCGTTACCAGTAATCCTTTCACTCTTTCTCATGGAAGTCCTAATCACACAGCTGTACACGCCCATCTGGCTGCAAGTGCGCACCTCGGAGGACAGCCTACTCTACTTCCATACCCATCATCAGCTCCCCTCAGTAGTGCTGCACCAGTGGCCCACCTCTTAGCCTCTCCATGTACCTCAAGACCTATGTTACAGCATCCGACTTACAATATCTCCCATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGGCATAAACCCCCGTCTCTTACCATCCCCAACCATTCATCAGACTCAGTACAAACCAATCTTCCCACCACATTCTTACATTGCAGCATCACCTGCGTATACTGGATTTCCATTGAGTCCAACCAAACTCAGCCAGTATCCATATATGTGAAAACTCATAAGAGTATATTGAGGAAGCTCAATGATATAAACATTTGATTAAAAATAAAACATGGTATTTAATAAATATTAGCCATGGCACAAGAAAATTATTTTTGAATCATGTAGACTTGGGTGCAATTTAAACAACTTTGAGCTTTAAAAAAGAAACTCACTTTTAATGTGTTTTGCACATTTGGTATAACTTGTCTTTGGTCATGTTATCTTCTTATGTTGTAACTCTAGACAGGTGACTTATGGGAGCAGAAGTCCAGTTTTTGCTCCTGCTATTTTTTATAAAATTGCCTTCTAACTAGTGCAAGACACGTCCATATTTGGGAAGCCATTCTGTGTACAGACTTAGAGCAACAGATGCACATATGTCAGAATTACAGCATACAAGTGAATTGTATTATCTGTGTCTTAGTGTATAAATGTTGGGTCACTTACCTAAGAAATTGAGCTATTGTTCTTTACATTTGCATGTGTCTTTGCATGGGCAAAATGTTGCCTAGACTTTGCTCTTCAATGTTGTTCTAATAATCTCAGCTGCATTGTAAACCGTTCCCACACATAGTGCCTTAAATATTTGAGGTTGTTAATGTTATTACTATATATAAATGTTGAGGACTGCAGCACTTCAAATTCAGACTTACTCTTTAGTTTCCTTTGATAGAGTAATGTTCATTTTTGGTTTTGTGTGGTATGATTTCAGGTTGTAGCTATTTTTCCTTACTAAGAGGGCAGCATGTTTGCAATAGCTGAATTCTGCTGTCTGACTTTTTCAGAATGATCTAGCTTCAAGAAAAGCGAGCAGGTAGTAGTGCTTAAGGAAAATTGATTCCGTATCTAATGAATAGTTGATATCTGTCACAACACAGCATTTTATGTACTGTTCAGTGAAACTGCAATACAATCTAAGTTTATTTTGGGAGTGTTTGCTGTATAATTGGATTTAATAAAATGTTTAGAGATGCAGTAGGCATGACTTTGAGTAGATAATGAAAGAAAATGCAAAATGCTCATTGATTCATGATGTGGTTTCATCCTAGCTTGGGCAAACCATGCAGTATTTAATAAATAGTAGCAGAATATTTACTATTGAAGCTTGAAAAGATGTGAGTTCTTTGTGTGCAATTTCTCATTTATGCATGTGAGAGGGTTTTTTTTTTTTTTTTTTTTTTTAGTATTTTTACATTGTAGTACTTGTTTTGCTTGTTGGTGGTGTTTGCTTATTTAATACATTCCGTCAGGGACAGAAATTACATGCTTTTTTTTCCTAGGAAGTATGTCTTGGGTTTTTCCCTCTTTATTCTTTACTTTTTTTTGGTGGTGGTGGTGGTGATGTTTAAATGAAGTTGCTTTTACAGCACCAAAGACTTAATCATCCATTTCCTATATAAAAGGTAGCTACTTTTTGCATAGACCTCAAGTATATTGTAGTGTAGAGGTGGAATTTAAAGGAAGGTATTAAACAGGCTGTGTTTTAGCTTATGGGCAAGTAATAAATTGTATCATTTATCTTGAATGTATCATAGATAAGCTGCTATATAACGATTGCCACTTCAGATAGCTGTGAAATTAGGTGATTAACTAGTTGTTATTTAGCCTTCTAATTTCTGTATAAGTCTAATTACATGAAATAGAAGTTGGGGTTTTGATTTTTTACTTTGCTTTTCTGTTTGGAGTGTCATTGTAACTACTGTATTGTAAATGATGGAAAATAATTGCGTATGTTATTTTGGGGTGTGTTATTTGCATCAGTATTTTATCTCTATTAATGTTTGTGCTCATCACTGCATATAAAAAAACTTGGATGTATCAATGTAACTTAATTTTTTATTTTCATACTGGCATTGTAGACACTTGAGAGAGCTGTATCTTGCAGGCTTGACTTAACTTTTTTTCCTTAAAAATCTGGAATATAATCTTATACCATTTACTGGAAGAAACAGGACAAAGCATTTGAGTGTAAAACTCTACAAATGTTTTGGATTTACAGCATTTCTTTGATAAATGAACTGCATACCACTAGTACAGGTCTAGTACAGCGTTGACAATAAGCTAATAATGGATGAACTTTTCTTTACTCCATTAATACAAGCAGTGTTTTATTTAATAATCATCGATGAAATAAATGTGCCTGATATTAATTTTAAAAATTACAGTATTAGATCATAAAATAAAAACCAGCAGTACGTTTTTAGTCACACTGAAAATGAAGGACTTAATTTTCCCCACAAGTTTCAGTGTTTTTAGTAATCAATTCTATGCATTTTATATAAATAGAAATATGTATATATATTACACATAAAAAGGAATAGCCTAAGATTAATTTAAAAGATTATTTACAGATGGCAAATTTATGGAGTCACTATTTAAGTAAACTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATCCGGTCCAGCAGTTTACTGGTATCTGCTCGCTTGTTGGAGAAGAATCAGTGCTGGAAGCTCATGTTTAAGAAACACCAAGGGCAAAAGATTGATGTTTGTACCAGGTACAAAACTGGCACAGTTTTCTTTTTCTTCAGGGCCATGTTTACTACCCTGAAATGTCATATTTTCTGTATTTCAGTTCCAAGACTGTGATGTCTTGTTAAATTGACAGTAAATGATAAACTTCAGTGTTTTCATAATATAACAGTCCTTTTTGATAAAGGCGTACCCGAGTTAAGTACATTGCTCTTAGCTGATTCTAATCATGGGCTTTTTAACAAGGAAAAAAAAAATTCCAAGATCCTGCTAAAGTCTAAATTTAGCATATTGACAAAAGAATCTGGATTTATACCCCCTTTAAAACCTTTTTTTACCAGTTTTCTTTTGTGTTAATGCTTTCTTAAATAAAACACTGCATGAATTCCAAGTTGCATATTTGCATACTATTTTAATTTACAAATTGTTTTTTAATCAAATATCCTGGTATTTTGTTTCTTTTTCTTTCAGGGTGTTTGAGTATGTTACTGTAGTAGCAAAACTTTTTCATTTAAGAAATCTCTACTACTACTTCTAAAGTTGGTTTGTGTTAAGTAAAAGTTAAATCATACACTGCAAGGTGTAGGGAGATTTGGTTTAAAGAACCCAATGATATAGGTTTGATGACTAAGTTTGAGCTATTAACTGTTTAACAGTTTTAGACTTGTGGCTTTCTTTGGTTGGTTTTTGCTTTTACTTCTATGCTACACTAGTTTGCCATGTAGCAGTTGCACTGTGCAATATTACAATAAGGACTGGGAAAATTTTTATGGAGGTAATGTCTATTACGGTTTGCGATAGTATTTCTCTCTAGTTCTCAGTGATTTAAATGTGACCAAGCCTTCTGTACTTTGTCACAAAAAGCGGGTTTTCCAGGTGACTATTTTGGTGAGTGTCAAAATAAGAATTTATGGTGTATTACTGTCGATTCACTTTGAATTAAAATATATATATTGCAGCAAACAGCTTGTTGACTTTTTTTCCACCCCAGTACTACTTCCAGAGTAGGGGAGGAAGAGGTTAGGAAGTTGGAGTTACCCAACTTACATCGTCTCATTTAATTTTCAAGACCACCTGTGAGACAGATATACAATTATCTTTATTATGTTAATGAAGAAATAGGCTCTCAAATATCTAGGTAAGTTGCCCAAAGCCCAAGCGCTAATGAGTGGTGAATCTGAGATGGGAACAGGCTGCCTAACCCCTAACTGTAACCAAACTACCAAC EMBV3_42573 CCGGAGACACCTGGATTTTAGCCCCACAAGACTCATTTCCAGTTTCTGCCCTCCAGAACT Gene BVT0101_023430 + 0 NULL GK000013.2:77353319-77564642 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044067 TCONS_00044068 1 XLOC_026110 NonCoding TCONS_00044068 XLOC_026110 NonCoding NonCoding - 13:77492146-77496573 - TSS32465 1377 3 TCONS_00044068_3 62 0.538126361655773 2 0.68933574333484 0.000533555925918374 7.7165130502587e-06 0.000571119960669047 0.000457743934988965 0.000297850207929521 4.90779019753488e-06 0.00031762743087268 0.00017181439083403 0.000126052150563227 0 0 1.29229827438633e-06 0 5.45556773277794e-08 3.15724319482631e-06 0 0 0 0.000431914511040389 0.000208245613288085 0.000334884059477243 0 0 0 5.13180691314423e-06 5.93351704399885e-06 4.46049721034388e-06 0 0 0 XM_600825.6 LOC522540 PREDICTED: Bos taurus myeloid-associated differentiation marker-like (LOC522540), transcript variant X2, mRNA. 3e-21 107 81.98 0.0791575889615105 NM_001163148.1 ETV1 Homo sapiens ets variant 1 (ETV1), transcript variant 3, mRNA. 3e-16 91.5 66.84 0.247639796659404 0 noncoding 1 0 0 0 -1.73818474584672 0.000567802519266338 -0.0640782659602947 0.207553937638183 GCATTAGCTCGTTTAATCCTCACCTGGATGCAGTCACATGGCCCCTTCAGGAGCCCAGGGGCAGAGGGGGGCTGGGCAGGGACAACTCCCCTGGGGCCCCAGCGCTGACCCCTGACCAAGCCAAGCACTGGCTATGTAGGTGCTTCTGACTCCTCTTCCCGGGATCTCTCCTCAAGTGGACTGGTGACTTCCCTGGAGGACTTGGAATTTTGGCTGAAGTCCCAAAGCTAGCAGTACTGGACCCCAATCATTCTAAAGAGAGTGCAGGAGACACCCGTGGGAGCCAGTGATCACCACCCCCATGGGAGAGAAGAAGGACGTGTGGAAGGAGACTCCCAGGAGGGGATTCGCAACAGGAGACACTCTTCAGCCCAGAGCAAGATGAAAAAAGGACTTTGCAGGTGTGATCAAGCTAAGGATCTTAGCTGGGGAGATGATCCTGGATTATCTGGGTGGGCCCAGTGTAATCCCTGGCTCCTTATAAAAGGGAGAAGGCCAAGTGAGAAGGGCTGCAGAGGTTAGACTGATGCTGCCAAGAGATGCAGACAGCCTCTAGAAGCTGCAAGAGGCAAGAAACAGATTCTCCATGGAGCCTTCTGGAGGAACCCGCCCGGAGACACCTGGATTTTAGCCCCACAAGACTCATTTCCAGTTTCTGCCCTCCAGAACTATAGGAGAGTAAATGTGTGTTGCTTTAAGCCACTAAAGTTGTGGTAATTAACTACAGCTGCCTCGGAACACTAATACCATTGAACTTATCCCTTACCATTGAGAGCATGAACTTGGCTCTCCTGGGGATTCTTCTGGCCAGAAGTAATACTGCTCTGAGCACATTTACTGTTCCTTTAACAAGAGTTTCTGGGGCTGATTCAGCAGCTCAGGCTATTTCCCTCTTTCTCATTCTTCAGGATAGTAAAGTCTCTGCCCAGAATCAAAATAGGGCTGTCGTGGGACTGCCCTCGTAGTCCAGTGGTGAAGAATCCACCTTCCAATGCAGGCAATGGGGTTCAAGTCCTGGCTGGGGAGCTAATATCCCACCTGCAGCAGAGCAACTAAGCCCACACCCCCAACTAGAGAGCCTGTGCACCCCAGTGAGAAGCCCTGGCACTGCAACTCGAGAAAGTCCACGCACCAGGGCGAAGACCCAACACAGCCCCCCCCAAAAAAAATAAGGAATGTAGTGGGCTTCCTCATGAGGGAAAGGGAAATCAAAAACCACAATGAGATGTCACTTCAAACCCACTAGGGTGGCGACAATAATAATACTTTTTTAAAAAACCAAAAAAAAAACGAAAATAGGGACTTCTCTGGTAGTCCAGTGGCTAAGATTACAAACTCCCAGTGCAGGGGATCAGGTTCAATCTCTGGTCAGAGAAC TCONS_00046385 r 3' 68070 TCONS_00046385 r 3' 72496 EMBV3_15503 TCCAGTACCAGTGAAAACCAGGTCTCCTGCCTGTCTAACGCACTATAGCCTTCTGAATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11468 CCTGCTGGGGTGCAAAGCTCCCTAAGCCATTAATTCACTCCTCTTCAGTAGGCTCGGTTT Gene GeneID:617294|RPH3AL:NM_001035494:166_cdna Constitutive 1 NULL GeneID:617294 19 GENE RPH3AL MGC127240 rabphilin 3A-like (without C2 domains) EMBV3_23912 CACTGCTATCTATATGTACCTGCAACCACCATCCCCTGCCTCCAAGGATCGGGGAAAGAT Gene GeneID:783203|LOC783203:XM_002697494:194_cdna Constitutive 0 NULL GeneID:783203 23 GENE LOC783203 NULL similar to olfactory receptor 1359 EMBV3_18005 TGGCCGGCCTCAACCTGCACCCGCACCCGGGCTTCTCCCACCTGCCCAGTGGGCTGTACC Variant GeneID:526616|TNRC18:XM_002698226:824_cdna 188^343 1 EMBV3_21424 GeneID:526616 25 GENE TNRC18 NULL trinucleotide repeat containing 18 EMBV3_38648 GACCCCAGCCCACCCCCGTGAGACTGAACTTTCCTCAAACATGATGGTCCTCAATGACAT Gene GeneID:281023|AP3D1:NM_173998:16_cdna Constitutive 0 NULL GeneID:281023 7 GENE AP3D1 BLVR adaptor-related protein complex 3, delta 1 subunit EMBV3_16268 AATTTGTTGCCAAAGCTGGAGAGCTCGTGGAACCCTGGAGGTCAACCTTCTGAGTTATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29280 TTCACAGGATCAAAGTCTCCTCCATATCCTCTCCTGAGTCCAGAGCCACCAAAACTGTCC Gene GeneID:100138528|BOSTAUV1R413:XM_002695269:9_cdna Constitutive 0 NULL GeneID:100138528 18 GENE BOSTAUV1R413 NULL vomeronasal 1 receptor bosTauV1R413 EMBV3_05224 CCACAGACTGTCCTCTCTACCTTTAGCAAACATCCACTTTTCTTCATTGTTTTGTACTGC Gene GeneID:540987|LOC540987:XM_002689210:116_cdna Constitutive 2 NULL GeneID:540987 7 GENE LOC540987 NULL similar to Uncharacterized protein C5orf5 (GAP-like protein N61) EMBV3_29598 GGAATTTGCTCCCAACCTGTGGATGTGAGGGTGATTTATGACCAAGGACTTACATGAATA Gene GeneID:533729|PAK1:NM_001076898:28_cdna Constitutive 2 NULL GeneID:533729 29 GENE PAK1 MGC139676 p21 protein (Cdc42/Rac)-activated kinase 1 EMBV3_12026 GCCCTTGAAATAGACCCATCAAATACCAAAGCACTGTACCGTAGAGCCCAGGGATGGCAA Gene GeneID:281420|PPID:NM_174153:54_cdna Constitutive 1 NULL GeneID:281420 17 GENE PPID MGC137782 peptidylprolyl isomerase D EMBV3_12976 GCTCAGATAGCTAATCAGTGGCAAAACAGGGAAATCCCACATCTGTCAAACACAAATGGC Gene GeneID:539993|SERINC1:NM_001035427:11_cdna Constitutive 1 NULL GeneID:539993 9 GENE SERINC1 MGC128951 SERINC2 serine incorporator 1 EMBV3_12860 AACAATCTGTGAACGGGAAGGGGACACTGGATGGGGACAGGGCGATACTGACAAGTTAGA Gene GeneID:505637|CNPY4:NM_001034253:89_cdna Constitutive 0 NULL GeneID:505637 25 GENE CNPY4 CNPY MGC129023 canopy 4 homolog (zebrafish) EMBV3_41266 TTTTCTTGAGGCTTCCTGTTTCTGTTGTCTGTGGATCATTGGACCAGATATGCCTGCGTC Gene BVT0101_026896 + 0 NULL GK000003.2:58428881-58564021 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173542 1 XLOC_104380 NonCoding TCONS_00173542 XLOC_104380 NonCoding NonCoding COL24A1 3:58506349-58563849 x TSS128983 3177 1 TCONS_00173542_2 69 0.529430280138495 3 0.944799039983304 1.28476932441114e-05 0.000338427062485622 2.91280938163586e-06 0 4.66211746586644e-06 9.00740518515561e-06 5.50680415285274e-06 5.58519580547778e-05 4.22198167626804e-05 0 0 0 9.03141162501581e-07 0 2.16200129186783e-05 0.00022446139156185 0 0.00030011139712024 6.77142378808892e-06 4.52718651228409e-06 1.91106524822971e-05 0 0.000225235897115271 4.22151146806129e-05 0.000242071798529382 8.20530242301097e-05 9.22120284592785e-06 3.0233502461616e-05 6.11220436927512e-06 0.000115438221034132 XM_002686308.1 COL24A1 PREDICTED: Bos taurus collagen, type XXIV, alpha 1 (COL24A1), mRNA. 8e-21 107 100.00 0.0182562165564998 0 noncoding 0 0 0 0 -0.0972507489098341 0.452334857448363 -0.00519643822069678 0.91614951228097 TCTGCACGGGGCTACAGGCTTCTGCTTTAAGAGACCGGAGGAGTTCAGGATAAGGGAGAGAGGCGAAATCCTCGCTGCGTTCAAATGTGAAGACCTACCCTGTTCTGTTCTAAGCTTGCACGAAGATGGAAGAAACATCTAATAGCACTCCTTTCCATGCTTCAGTTTCTTAAGCAGTACTCCAGAGACGATGATGGCATTGTATATTCTGATTTTTCTTGAGGCTTCCTGTTTCTGTTGTCTGTGGATCATTGGACCAGATATGCCTGCATCTAATATTTGTGAGTGGAAAAGACTGAAGTCTCTATAGCTAGTGTAAGCCTGCCAACCTTTGCATCCATTGAGTGGCCAGGAGAATCAAATGGGGCATAAAGTTGGACTTTAGGACATATTCAAACTGAAAAGTACTGGGGTAGCATCTTAATTCTGGAATAACAGGCTCAGAATATTCAAACAGCACCTTATTCTAAATGCAAAGAGTAGGAATTTTTGAATGAGATGGCCCTGCCTTCTTGCATTAAAAAGGCAAGACAAAACACATAGTATTTGTTAAAGGCCATTTTCTATAATAGGTAGAAAACCCTTGTTTGTTTCATTTTTTTTCCCATAGCAAAGATTTCCTCTTGCTCATTCTGGGCTTGCCCTGGTCTGTCATAGTAGATTTACACACATCCTCGACCATTCCCCCTCTACTATTCTTCTAATCCTACAAAATGCAAACTTGAATTGTTGCTTCCAAGAGTAGGGGACTATCTCTATTGCAGTGGTTTTCAGACTGGTGACGCTGTTAAAAGAGCTGGGCCCCACCCCTAGAGTTACTAAATCATTACATTTGGGATGGGGCTTGAGAATCTGCATCTAATTCTGGTTCATGGATGATATTTGGAGAATCACTGATCTATACTGAAATATGGAAGAAAAGGGTGAAAAAGTCCTAATATCACCTCTGTATCCCATTTCCCACCCCGCCCCAATTTCCTCAGAATGTTGGACATTTTGTAGTTTGTAGAAATTACAGCTGGCTTTTTAAAAACCAGGATCTGATGCAGGCTTACAGTCTTAACTAGTGAGGCAGACATATATCTTGACTCATCATCTCCTCTCATTCAAGAAATAGTTTCCTCTACTATGTGAGCAAACATATAAGCTTTATAAAAGGTTTTCCATCAAGCAAGAGCTCATTCTTATATGGGTTGGAGTGCTTTGAACTCAGGCATTGTTGTTCACTGGTGAATTGGTAGGGGGCTTCATTTTTTTTTTTTTTTTGGATATAAGCATTATACCATAATACATCTTTTGTAGGCCTAAATGCTTGAACTCAAAATTGGCTCTCTCCTGAGAACACTGCTTCCATGCGAGCCCTTTCTGCCACAGCCTCTATAGCATTGTGCCTGAGTCAGGAAGGGGCCTTTCTTGCTCCTTGTTGCCACTTACAGACCATTATCTCTGCTTTCAGTCTGAGAACACTCCGTGGTAAAATTGTTGTCATCGCACTCTATCGCCTGTCACCTGTTCCTGTTGCCATCATCAGCTTTATTTCTTTGATTTTAGCTTTTGGCTAGCTCTTTATAACCTAATTCGTGGTGATTTTACATCCATGTGGTTGATATCTGTAATATTCTGACCTCTACTCAGTTCCTCCAACTCTTTCCCACCAATTTTTTTGTGCCCTTCTCCTGTTCTGTTTCCTTTCATCATTAACTCCCAAGGCCATGCCCTAGTCTTTTTTTAGGTTTATTACCTACAGCTAGATCTCCTCCATGATTTCACCTCTCTTCTCATTTTGGCTCATTCCCTCTAGTGTCCTGACTCCAGTAATTCTTTGATCCCATCATTTTTACTCCCAGAGTATAGCCCTTTGAAAGCCTGAATCCCCACTATCTGTGGGCTTCGGATTCCAGCCTTTGATCTCCTATTGCACTACTCCGTTGCTGGATGCACCCAGGGCAAAAGCAGCTGTAAGTGTGTGCCCATTTGTGCTGTGTTCTTCAAAATCCTTACTACTTTGTCAGTATTTTATGTTTTTTAACTTTTTAAAAATTTAGTTAGGCAAATTGAATTACCTGCTTCATAACTGAGAGTGGAAACTCTCCAGCTCCACCATTTTCTCTTAAAACCTGATACAGTTTTAACTGCTACCATTCTTCTAAACTGCTCTTGCAAAGAGCATCAAAGAACATCCCATTACTAAATCTAGTAGCCTTTTTCAGTCCTCACCTAACTTGACATTGGCCAAGTAGATCCCTGCCTCTTCAGGCAAACATTTTCTTCACATTCATCTACTTTTTCTCCTATCTCAGTGATAGCTTCTTTTTAGCTTTCTTTGCTAGTTCCTCCTCAACTCCCTGATCTCTAAACATGGAAGAGTTCTAAGGCACAGCTTTTAGAACTTTTAAAAAATCTACTCTTTAGGTAGTCCTAGAGAGTTTCAGGGCACCAGATGCTATTTATATGCAAATTACTTTATATATTTTATCCATAACCAGGGCCTCTCTCCTGACCTCTCTCCTGAATAGCCAACTATTTACTTGACATACTTCCTTGAATGTCTAACAGACATCTCAAACACATCCAAAACTGAACTCCTCATCTTGATTCCAAACTTGCCTCTCTATCTGTATAGACAGCAATTCCACTCTTCTAGTCCTTTAGTCAAAACTCTTAGCGTCATTCTTTACCATTCTGTTTCTCTCAAAATCCATATCTGAATTATCAACAAAAAAACCTGTTGGCTCTACCTTAAAGCTTATCCAAAGATTTAACCATTTCTTATCACTTTCCCACCACTAACTCTAGTCCAAAACGTCATCATCCCTTATTGGATTAATTTTGTAGCTTTCTCAATGGCTCCTTCTACCCTGCCCTCATTATATTTGCAATACATCACCAAGAGTAACATTTTCAACATTTAAGTCAAGTCTTGTCAGTCCTTTGCTCTAACTCTTCTAAATCTTTCCATATTCAGAGTAAGAGCAGGAGTCTTTTGATTAGCCTATAATATCCTATATAATCTGGTTTCTTGACATCTTTCTGATTTCATTTCCTACCATTCTTCTCCTTATGAACCTCTTCCAGTCACCTGAACCTTCTTGCTAATAGGACATGCTAAACACAGGTTCAGGGTCTTTGCATTTGTTCTTTCTTCCTGGAAAGCTCTTTCTCCCAGATTTCCTGTGG TCONS_00170064 r 5' 0 TCONS_00170064 r 5' 0 EMBV3_11523 TATCTGGACTGTTAAATCAGTTTTACTTGTCAGTATTCTTTCAGCAAACATTCTTCCCAT Gene GeneID:541211|DIXDC1:XM_002693011:216_cdna Constitutive 2 NULL GeneID:541211 15 GENE DIXDC1 NULL DIX domain containing 1 EMBV3_03002 TCGATGATGATTGTAACCAAACAGGGCAGATGACAGCTGGATTTCTGGACTGGCCACAGG Gene GeneID:617210|ETFB:NM_001038582:41_cdna Constitutive 3 NULL GeneID:617210 18 GENE ETFB MGC134248 electron-transfer-flavoprotein, beta polypeptide EMBV3_31255 TGCGCATCAGCGTCAACCCCGGCGAATCCTTCCTGGACCGCATGATCTCCATGGTGGAAT Gene GeneID:100300204|LOC100300204:XM_002683918:2_cdna Constitutive 0 NULL GeneID:100300204 Un GENE LOC100300204 NULL similar to ATPase, Cu++ transporting, alpha polypeptide EMBV3_04885 GTCTTGAATTCTTCAAAACTTCTCTGGGAAGAAAGGGAATTCCGACAAAGCACAATCCCA Gene GeneID:540485|GRM1:XM_002690301:6_cdna Constitutive 2 NULL GeneID:540485 9 GENE GRM1 NULL glutamate receptor, metabotropic 1 EMBV3_00890 CCAGCAGCGGCTACTGGTCCAGACAAGTGTGCAGGCTCTTCCCACGCAGCGTCTGGTAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19838 TCCCCATCTGCGGTTCCAGAGAGATTCCCCATTTCCTCTGTGAGATCATGTCCATCCTAA Gene GeneID:789031|LOC789031:XM_002689096:17_cdna Constitutive 0 NULL GeneID:789031 7 GENE LOC789031 NULL similar to olfactory receptor Olr1414 EMBV3_14376 ATATTCTTATCTGGCTCAATGGAAAAGTCTAAAGATGATAGAACCAACAGAGCTTAAATG Gene BVT0102_249410 + 0 NULL GK000008.2:20454947-21763505 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14793 AGACCTGAAGGGGAGCAGCCAGGAGAAAACGTACCCCAAGTCGAACCTCCAAAATCTCCA Gene GeneID:535465|IFI27L2:NM_001076061:274_cdna Constitutive 0 NULL GeneID:535465 21 GENE IFI27L2 FAM14A isg12(b) family with sequence similarity 14, member A EMBV3_02575 CCAAAAGGAGGAATTCCAAGATGTTTTTAGTAACCATTGCTTGTGATGCAGTTCTCAGCT Variant GeneID:100141289|USP13:XM_002684902:29_cdna 435^557 1 EMBV3_08918 GeneID:100141289 1 GENE USP13 NULL ubiquitin specific peptidase 13 (isopeptidase T-3) EMBV3_33026 CGGGAGGCGGGGACAGCGCTTCCGGACCAGAGCTATGGGTTTCCCTGGAGGAACACCAGG Variant GeneID:506848|SIKE1:NM_001075281:29_cdna 253^358 3 EMBV3_16361 GeneID:506848 3 GENE SIKE1 MGC142423 SIKE suppressor of IKBKE 1 EMBV3_42969 GTCATGACTCCTCTGCAAGCTATTCAGATGGTGCTGGACACGCTCAGCCTTCCTTATTAG Gene GeneID:534849|ASPM:XM_002694269:271_cdna Constitutive 0 NULL GeneID:534849 16 GENE ASPM NULL asp (abnormal spindle) homolog, microcephaly associated (Drosophila) EMBV3_02341 CTGCTCTGACAGCCATGGCAGGAGATTTATTTAAAATTGTTGTAGGGACTTCCCTGGCAG Gene BVV0102_323681 + 0 NULL GK000018.2:26593960-26788813 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22746 TCTGGTGCCGATCTTCTCCTTTGGGGAGAATGACATCTATGACCAGGTTGAGAACTCTCC Gene GeneID:785379|LOC785379:XM_002683754:6_cdna Constitutive 0 NULL GeneID:785379 15 GENE LOC785379 NULL similar to Monoacylglycerol O-acyltransferase 2 EMBV3_15432 TTTAAAGAACACTCATTTCCCCCAGATCCACAACCTCCTCTGGCTTCAGCATCTCGGCAG Gene GeneID:282859|CBY1:NM_174739:10_cdna Constitutive 0 NULL GeneID:282859 5 GENE CBY1 NULL chibby homolog 1 (Drosophila) EMBV3_43514 CTCCTGGATTAGCACCTTGGCTGTGAAGCAAGCGTTAGTCTGTCCACCCTTCAGAGACTT Gene GeneID:510942|CHRAC1:NM_001075478:50_cdna Constitutive 0 NULL GeneID:510942 14 GENE CHRAC1 MGC142339 chromatin accessibility complex 1 EMBV3_41992 TTACGAAGAGGTCTGGATCTGGGTCTCGCTGGCCGTCTGTGTCCTCTGGATAATGTACCT Gene GeneID:511818|LOC511818:XM_002686627:164_cdna Constitutive 0 NULL GeneID:511818 3 GENE LOC511818 NULL hypothetical LOC511818 EMBV3_36029 TGCTCACTGGCTAATACGTAAGAAACCGGAACATTCTTTATTCTCCGATGAAGTTGAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22232 CGAGATCTTCGATTTGATTCGCTCCATCAATGACCCGGAGCATCCCCTGACGCTAGAAGA Gene GeneID:614585|FAM96B:XM_002694807:657_cdna Constitutive 0 NULL GeneID:614585 18 GENE FAM96B NULL family with sequence similarity 96, member B EMBV3_24220 ATACTAACGTGAGATTGGGAGAGGGTGGGGCAGGTGAGTAGAGAAATGGGTATAAGCCTC Gene GeneID:100299693|LOC100299693:XM_002686159:299_cdna UTR3_Alt 2 NULL GeneID:100299693 3 GENE LOC100299693 NULL hypothetical protein LOC100299693 EMBV3_06508 GCAGCTTTCGTGGGATCCGAGGGCCAGAGAGTCCTCAGGACCCCAGGGAACAATCTACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09136 ATCGATAGGAGCTCATCAAACGCTTCATACCTACACTGAAACCAAGCACCACCCAAGGGC Gene BVT0102_018014 + 0 NULL GK000006.2:9179261-9455205 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206762 1 XLOC_125283 NonCoding TCONS_00206762 XLOC_125283 NonCoding NonCoding - 6:9306812-9307174 - TSS154269 362 1 TCONS_00206762_1 51 0.986187845303867 1 0 0 0 0 0 3.75061248507588e-05 1.64689351558804e-06 0 0 0 1.13659682045438e-05 1.26474339657215e-05 0.000880340878366806 0 1.44382956695076e-06 0 0 0 0 0 0 0 0 5.06854508259214e-05 0 0 0 0 3.79051578591278e-06 0 0 XM_005223911.1 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant X2, 2e-30 136 93.33 0.24585635359116 0 noncoding GAGAACACCAGAGAACTCCTGGCTCCAGGGAACATTAATCGATAGGAGCTCATCAACGTCTTCATACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCACGGCATACCATGCAAATTCCCCAGCAAAACAGGAACACAGCCCTGTGCTTCAATATAGAGGCTGCCCAAAGTCACTCCAAACCCATTGACATCTCATATCTCATTACTGGACACTTCATTGCACTCCAGAGAGAAGAAATTCAGCTCTACCCACCAGAACACTGACACAAGCTTCCCTAACCAGGATACCTTGACAAGCCTCCCGTCCAACCCCATCCACAGAGAGGAAACTCCACAATAAAGAGAAC TCONS_00202439 . 5' 148032 TCONS_00202439 . 5' 148032 EMBV3_27106 CTTCACCATTTTATATTGCCTCAGAGTTGTCATTGTTTGCTGTTGGATATGAGTTCTGAC Gene BVV0102_050356 + 0 NULL GK000017.2:24459026-25033557 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12516 TGGACCAGCAGGGAAGCCCGACACCTGTGCTTTTTCTAACCACATCTTTCCCCAAAAGTC Gene BVV0102_071120 + 1 EMBV3_26784 GK000021.2:21965414-22014264 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15088 ACCATACTGGTTTGATTACTGTAGCTTTGTGGTATAGTCTAAAGTCAGTGTGATACCTCC Gene BVV0102_352556 + 0 NULL GK000030.2:79682928-79694989 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22034 TCGTCCACCTCAACGTGTCCTACCCTCCACAGAACTTGACTGTGACTGTCTTCCAAGGAA Gene GeneID:506364|SIGLEC8:XM_002695235:23_cdna Constitutive 0 NULL GeneID:506364 18 GENE SIGLEC8 NULL sialic acid binding Ig-like lectin 8 EMBV3_12216 TGGAGCATTGCCTCAAACATGGGCTGAGAGGACAGCTGTGGGAAGGGGCAGAGCTTGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13478 GCAGATTTTCGTGGTCATCAAGGACAAGCCGCTGAGCTCCATCAAAGCCGACATCGTCCA Gene GeneID:535868|BRSK2:XM_002699412:62_cdna Constitutive 0 NULL GeneID:535868 29 GENE BRSK2 NULL BR serine/threonine kinase 2 EMBV3_39416 CTCTTGGGGACTTTGAAATTACAGCACCTGTGGTCTTACGGTTCAAGTGTGGTTCAGGGC Gene GeneID:511386|LOC511386:XM_002686718:71_cdna Constitutive 0 NULL GeneID:511386 4 GENE LOC511386 NULL similar to nucleophosmin 1 EMBV3_09112 TCCTCAGGGAGCTAATGAAAAATGAGTTTAATACAGTTGTGGGGGGTGGGAGTCTGCCCC Gene GeneID:784285|LOC784285:XM_002699631:5_cdna Constitutive 0 NULL GeneID:784285 X GENE LOC784285 NULL similar to TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) EMBV3_16229 AGCGATGGCTGTGGACCGTTACGTGGCTGTCTGTAACCCCTTGAGGTACAACGTCATAAT Gene GeneID:509207|LOC509207:XM_002687005:19_cdna Constitutive 0 NULL GeneID:509207 4 GENE LOC509207 NULL similar to Olfactory receptor 9A4 EMBV3_08605 AGCCACATCAGCCCCCTGAGTTGCACCGAGGCCTATGCCATCAATGGGAAGATTTCTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21678 CACAGGCCAATTCCATTCCAATCAACAGACCCAAAAGATACAATTTAAATGAAGTTCTAG Gene GeneID:510156|CYP4V2:NM_001034373:31_cdna Constitutive 2 NULL GeneID:510156 27 GENE CYP4V2 MGC127339 cytochrome P450, family 4, subfamily V, polypeptide 2 EMBV3_22050 GTGTGCGCTAAGGAGGAGGTGGCAGTTTTAAGTCCTTCCTTTATGCTTTTCAGTTTGGTC Gene GeneID:537985|HIST2H2BE:NM_001099384:133_cdna Constitutive 1 NULL GeneID:537985 3 GENE HIST2H2BE NULL histone cluster 2, H2be EMBV3_22983 GCTGGAAACTTCCTCATAGGAGTGGGGGTCGAGGGGATAATAAATGTGGCCCAGGAAGAA Gene GeneID:618575|LOC618575:XM_002686980:808_cdna Constitutive 0 NULL GeneID:618575 4 GENE LOC618575 NULL similar to T-complex protein 1 EMBV3_02093 AAAGGAGAGGGCATTTTCCTACTACATGCTCTTCTGCTAAGCTTGATATCCCCAACTTGC Gene GeneID:520530|MDFIC:NM_001101102:60_cdna UTR3_Alt 2 NULL GeneID:520530 4 GENE MDFIC NULL MyoD family inhibitor domain containing EMBV3_30304 GCTTATGAATACACATTTCAGTTAGAGGCTGGAGAAAGTGAGAGGTGGGATGGGGCGTGC Gene GeneID:514740|MRPS27:NM_001038108:118_cdna Constitutive 1 NULL GeneID:514740 20 GENE MRPS27 MGC128369 mitochondrial ribosomal protein S27 EMBV3_10387 TTAAAGTCTTCACTTTTAGATGCTGTTATTTCTAGCACAGGTAAGCAGGCAGAGTCTTTC Gene BVT0102_131878 + 0 NULL GK000008.2:97113250-97126429 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34641 CGCCTTGAGCAGTCCGCCCCATACCTGCCATGGAGAAGGTATTCCTTTATTAAATTCTTC Gene BVV0102_250888 + 0 NULL GK000011.2:19042119-19045533 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024263 TCONS_00024273 TCONS_00024272 TCONS_00024277 TCONS_00024271 1 XLOC_014466 Coding TCONS_00024263 XLOC_014466 Coding Coding CRIM1 11:18833933-19044181 j TSS17846 5196 1 TCONS_00024263_10 877 17 0.975367068257811 0.00102973190242707 0.000416069083807176 0.000799390377283671 0.00108522672948508 0.000800020407886801 4.48104367641659e-33 0.000613392727021808 0.000609316665124209 0.00155493527913469 7.21335459232626e-05 2.78176900036859e-05 1.37811900444382e-05 2.12890132578004e-05 1.07736977594877e-19 6.48320303614511e-14 0.0017212441979085 0.000649609015327247 5.44570667107713e-05 0.00113699419266848 1.723877512294e-08 3.3212221994985e-07 0.000472128722671488 9.23965572128982e-06 0.000160808316477816 0.00139983849150335 5.96764880267588e-07 0.000292659637446421 6.66011051243661e-08 2.70654656701524e-08 3.72386960199533e-08 NM_001205298.1 CRIM1 Bos taurus cysteine rich transmembrane BMP regulator 1 (chordin-like) (CRIM1), mRNA. 0.0 9313 100.00 0.99364896073903 NM_016441.2 CRIM1 Homo sapiens cysteine rich transmembrane BMP regulator 1 (chordin-like) (CRIM1), mRNA. 0.0 6455 87.61 0.994611239414935 TCONS_00024263_10 sp|Q9JLL0|CRIM1_MOUSE CRIM1_MOUSE Cysteine-rich motor neuron 1 protein; 0.0 1590 90.33 0.998859749144812 0 coding 0 0 0 0 -0.901484398946393 0.542149182335294 -0.00692651862100105 0.888435462345193 AGTGGAAGATGGATTCTCATCCAATTTTGCAGAGATGAGAACTGGGATGATGACCAACTGCTTGGTTTTGAACCATGCAATGAAAACCTTGTCTCTGGCTGCAATCTAATCAATGGGAAATGTGAGTGTGACACCATTCGAACCTGTAACAATCCCTTCGAATTTCCAAGGAAGGATATGTGCCTTTCAGCTTTAAAGAGGATTGAAGAAGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGACTCCGTTCTGATCGAGGGCTACGCGCCCCCTGGGGAGTGCTGCCCCCTCCCCAGCCGCTGTGTGTGCGACCCCGCGGGCTGCCTGCGGAAAGTCTGCCAGCCAGGATACCTGAACATCCTTCTTAAAAGAGCCTCAGGGAAGCCAGGAGAGTGCTGTGACCTCTATGAGTGCAAACCAGTTTTCAGTGTGGACTGCAGCACCGTGGAGTGCCCCTCCTTTCAGCAAACCGTGTGCCCCCTGGACAGCTACGAAACCCAAGTCAGACTCACAGCGGATGGCTGCTGCACTCTTCCAACAAGATGCGAGTGTCTCTCTGGCTTATGTGGTTTCCCCGTGTGTGAGGTGGGATCCACTCCCCGCATAGTCTCTCGTGGAGATGGGACACCTGGAAAGTGCTGTGATGTCTTTGAATGTGTTAATGAAACAAAGCCAGCCTGCGTGTTCAACAACGTGGAGTATGGTGACGGAGACATGTTTCGAATGGACAACTGTCGATTCTGTCGATGCCAAGGGGGTGTTTCCATCTGCTTCACTGCCCAGTGCGGTGAGCTGAGCTGTGAGAGATACTACATGCCCGAAGGGGAGTGCTGCCCTGTGTGTGAAGATCCTGTGTATCCTTTGAACAACCCCGCTGGCTGCTATGCCAATGGCCAGATCCACGCCCACGGGGACCGATGGCGGGAAGACGACTGCACATTCTGCCAGTGCATCAATGGGGAGCCCCACTGCGTGGCGACGGCCTGTGGACAAAGCTGCATGAGCCCCGTCAAAGTGCCTGGGGAGTGCTGCCCTGTATGCGAAGAACCAACCTACATCACAATTGATCCACCTGCATGTGGGGAGTTATCAAACTGTACCCTGACAGAGAAGGACTGCATTTATGGTTTCAAACTCGATCACAATGGTTGTCGAACCTGTCAGTGCAAAAACAGGGAGGAGCTCTGCACGGGCCTCAGGCGAGGCTGCACCTTGAACTGCCCCTTCGGCTTCCTAACTGACGCCTACGGCTGTGAGACCTGTCAGTGCCGCCCGCGCCCCCGGAAGTGCAGACCTACAGTCTGCGAAAAGCATTGTCCATTCGGATACCTGAAGAATAAGCACGGCTGTGACATCTGTCGCTGTAAGAAATGCCCAGAGCTCCGGTGCAGTAAGATCTGCTCCCTGGGTTTCCAGAAGGACAGTCATGGCTGTCTCATCTGCAAGTGCAGAGAGGTCTCTGCCTCCGCCGGGCCACCCGTCCTGTCAGGCACGTGTCTATCCATGGATGGCCATCATCATAAAAATGGGGAGAGCTGGCATGATGGGTGTCGGGAATGCTACTGTCACAGTGGACGGGAGATGTGCGCTCTGATCACCTGCCCCGTGCCTGCCTGTGGCAACCCCACCATTCACCCGGGACGGTGCTGCCCATCATGTTCAGATGACTTCGTGGTGCAGAAGCCAGAGCTCAGCACGCCGTCCATCTGCCACGCGCCCGGGGGAGAGTACTTTGTGGAGGGAGAAACGTGGCACATTGACACCTGCACGCAGTGCACGTGCCACAGCGGGCGGGTGCTGTGTGAGACGGAGGTGTGCCCGCCGCTGCTCTGCCAGAACCCCACACGCACCCAGGACTCCTGCTGCCCACAGTGCCCAGATGAACCTCTCCAGCCTTCCTCATCCCACAATGACAGTGTGCCTAGTTACTGCAAAAACGATGAAGGGGATATATTCCTGGCAGCTGAGTCCTGGAAACCCGACGTGTGTACCAGCTGCGTGTGCATGGATAGCGTCATTAGCTGTTACTCTGAGTCTTGCCCTTCTGTATCCTGTGAAAGACCTGTGTTGAGAAAAGGCCAGTGTTGTCCCTACTGCATAGAGGACACAATCCCAAAGAAGGTGGTGTGCCACTTCAGCGGGAAGGCCTATGCTGACGAGGAGCGCTGGGACATTGACAGCTGCACGCACTGCTACTGCCTGCAGGGCCAGACCCTCTGCTCCACCGTCAGCTGCCCGCCGCTGCCCTGCATCGAGCCCATCAACATGGAAGGCAGCTGCTGCCCCATGTGTCCAGAAATGTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAATCATCGGGAGATTGACATGGAGGTCCCCCTGTGGCCCACACCCAGTGAAAACGACATTATCCATCTCCCCAGAGACGTGGGTCACCCCCAGACAGATCACAGAGAGAATACCAGGCTGAACTCAGAAGAGTCTTCGGTGGACTCCATTGCCTCAGTTGTGGTTCCCATAATAATAGGCCTCTCTATCGTAATAGCATTCCTGTTCATCAATCAGAAGAAGCAGTGGGTACCACTGCTCTGCTGGTATCGAACACCAACTAAGCCTTCTTCTTTAAATAATCAGCTGGTATCTGTGGACTGCAAGAAAGGAACCCGGGTCCAGGTGGACGGTTCCCAGAGAATGCTGAGAATCGCGGAACCAGACGCGAGATTCAGTGGCTTCTACAGCATGCAGAAACAGAACCACCTACAGGCAGACAATTTCTACCAAACAGTGTGAAGACAGGCGGCACCAACGAGGTTCTGAAAGACAGAAAAACGACTCAGTCTGCTTTTTAAAAAGTAAACTCGAATTCGTGCACTTGCTTAGTGGATTGTATTGGATTGTGACTTGATGTACAGCGCTGAGGACTTCCTGGGCTGGGCTCTGTCGGCGGCGGCATGCAGAGCAAGCATTCCCACTCCTCCTCAAGATCACTGACCAAGTGGTGTCTTAGAACCAAAGGTTTCAAAGTTGCTAAGATGTATTTGCTTGTAATATAGCTGTAGAGAAACTTGGGGGCGGGGACAGTGAGTTTGGCTGGGGAGAATGGGTGGGAGGGGGGCGGTGGTGGAAAGACACAGTTGGTCAGCTCGGCTCGGGGAGAAGTCCAGTCCAGTGGCCCAGAGGATATCCTTTCCTGTTGCTTGGAAGACTGCACTGGTTGCTGCAAAGCTCAGGCCTGAGCGAGCAGGAAAACAGGCCTTGCGATCCTTCTGCCTGTAACCACCTTAGACTACCAGACAAAAGCACCAGACCCTTTTGATAGCCATCCCAGGCCTCAGGCCACACGCTTCTTTTCTATACAGTCACAGCTGCAGTAGGCAGTGAGGAAGCAGGAGGCGTGGGGTAGCCACGTTTCTCTAAAGCGGGTGATTAAGGATCTACACAGTTATACTTTTTGCTGCTTTCTTTTTTCTTCCGAGCCAGTCAACCAGTTCCTAGCAGAGTCAGCAGATGATCAGGACCTGAGTCGTTTCTTGATGTGAGCACTGGAGCTTTTCTGCCGGCCACATGGCAGGAAGGAGGAGAGGGTGAGGTCACCAGGCGTTTCCAGGGCTACACTTCCTTGTTGTCGCTTTCTTCTGTTCTGTTGTTGGTTGTTCATAGTTTTCGTTGAAGCTCTAGCTTAAAAAGAAACTTTTTTTTAAAAAAAAAGACTGTTTGGGGATATTTTTTTTTCCTTCTTATATACTGAATCTACAAAATAGAAACTACTTCATTTTAATTGTATATTATTCAAGCACCTTGGTTGAAGCTCAAAAAAAAAAAATTATGCCTCTTTAAACTCTAGCAATTATAGGAATATTTATGTAACTCTTATGCTTCAGAAAAACAAAAGTATTTGTGTGCGTGTGTATATAATATATATATGCATATATATTTATACACATACAATTTTATGTTTTCCTGTTGAATGTATTTTTATGAGATTTTAACCAGAACAAAAACAAACAGGCATTCCATCACAAATTTTTGACTAACACAAAATCTCATTCTACCTGCAGTTTAGTTGGGAAGAGAAATGTGTGTGTGAGTGTGAGTGTATGTGTGTGTATGCACACGCCTTGAGCAGTCCGCCCCATACCTGCCATGGAGAAGGTATTCCTTTATTAAATTCTTCCTCATTTGGATTTGCTTTCGGTTTTCAATTCGCTCACTGGCCAGAGACATCGATGGCAGTTTTAGCTGCATCACTAATCAGCTCCTGGATTTCTTTGTCGTCTTTCAAACAACTGTTTGAAACAACTACTGGAATATTGTCCATAAGAAGCTGGAAGTTTGTTGTAGTTTGCCTCAGATATAACTGACTGTATACTATAGTGTTAAACTTTTCAAACAGCTCTTAGCACTTTTATACTAATTACCCATTTGTTGCATTGATTTTTTTTTTCTTTTAAAAATGCTTGTTGTGAAAGACACAGATACCCAGTATGCTTAATGTGAAAAGAAAACGTGTTCTGTTTTGTAAAGGAACTTTCAAGTATTGTTGTAAATACTTGGACAGAGGTTGCTGAACTTTAAAAAAAATTAATTTATTATTATAATGACCTAATTTATTAATCTGAAGATTAACCATTTCTTTTGTCTTAGAATATCAAAAAAAAAAGGAAAAGAAAAAGGTGTTCTAGCTGTTTGCATCAAAGAAAAAAAAAAAGATTTATTATCAAGGGGCAATATTTTTATCTATCTCCAAAATAAATTTGTTAATGATATGCTACCAAAATAGATTTACATCAGCCTGATTAGTATAAATTTTTGTTGACAATTAACCATTCCTGGCATAAAAAGTCTATCAAAAAATTGTAAATGCTTGCTTTTTGTTTTTTTCAATCATGGCCATATTATGAAAATACTAACAGGATATAGGACAAGGTGTAAATTTTTTTAATTATTATTTTAAAGATTTGATTTATCCTGAGTGCTGTATCTATTACTCTTTTACTTTGGTTCCTGTTGTGCTCTGTAAAAGAAAAATATAATTTCCTGAAGAATAAAATAGATATATGGCACTTGGAGTGCACTGCAGTTCTACAGTTTGTTTTCTTCAAAAAACAAGGCTGTAAGAGGATTACCTGCAACTTGATTCTTGGCAGCAAATAAACACTTTGAATCCAAATCACA EMBV3_10170 AGAGGCTCACCAGAACACACACGGATACAGAAGGCACACGGAACACACATCACGTCCAAA Gene BVV0101_004677 + 0 NULL GK000018.2:46801140-46818877 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15062 TCCTGCGCGACCACAGCTATGCGACCGAAGATAAAACTGTGAAGCTGTGGAAAGTCAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31906 CCTAGAGCAAGTAGTGACTTCCAAGGGGCTAAGATTTTGCTGAAGCAAAGCTTAGAGTTT Gene GeneID:528021|ANKRD13C:NM_001098719:46_cdna Constitutive 1 NULL GeneID:528021 3 GENE ANKRD13C MGC157217 ankyrin repeat domain 13C EMBV3_23980 CGCCGTGCACAGTATAACTTGCTCCTTTATTGGAGTGGTATGTCAGCCCTTAAACATCTC Gene GeneID:540275|CHRDL1:XM_002699872:88_cdna Constitutive 0 NULL GeneID:540275 X GENE CHRDL1 NULL chordin-like 1 EMBV3_36863 CATCTCGTCCAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCAT Gene GeneID:782971|LOC782971:XM_002697467:101_cdna Constitutive 0 NULL GeneID:782971 23 GENE LOC782971 NULL similar to histone cluster 1, H2bd EMBV3_43278 GTGGAGGTGAAAGGTGAAAAACCTGCCAAAGTAGATAAAATTTTATTAATATCAGAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18986 AAGTTGCTGAACAGTTAGAGCTGGAACGGATAGGACCGCAGCATCAGGCAGGATCTGACT Gene GeneID:508055|CNOT7:NM_001034312:16_cdna UTR3_Alt 2 NULL GeneID:508055 27 GENE CNOT7 MGC128204 CCR4-NOT transcription complex, subunit 7 EMBV3_00187 CCCATGGAGAAGCGAGGATTTTATGAATCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAG Gene GeneID:513040|PLEKHA1:NM_001075593:14_cdna Constitutive 0 NULL GeneID:513040 26 GENE PLEKHA1 MGC152014 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 EMBV3_40909 CAATAGACTGATTAGGATGGACGCCAGCACGGGAGATGCAATTAAAACCTGGCGTTTCAG Gene GeneID:616981|FERMT2:NM_001101264:137_cdna UTR3_Alt 3 NULL GeneID:616981 10 GENE FERMT2 NULL fermitin family homolog 2 (Drosophila) EMBV3_13377 TCAAGGCAGAGCTGGTCAACCAGATTAAAGAGACCTGGTGTTACGTGGCCATGGACATGA Gene GeneID:616410|LOC616410:XM_002697075:593_cdna Constitutive 0 NULL GeneID:616410 22 GENE LOC616410 NULL similar to Actin-87E EMBV3_11090 CTGGAGAAGATGGTGGCCAGGAAGAAGACGACCACCAGGATTGGAGTCGCCGTGAACGGG Variant GeneID:533803|TCEA3:NM_001046360:218_cdna 180^242 1 EMBV3_37406 GeneID:533803 2 GENE TCEA3 MGC137536 transcription elongation factor A (SII), 3 EMBV3_17229 AAGTTTCACTGCAGAACTGCAGAGTATGATTTACAGCAAGCTGCTGAAGTTTCTCAGCTT Variant GeneID:618133|SUPT3H:NM_001105008:365_cdna 251^335 1 EMBV3_14198 GeneID:618133 23 GENE SUPT3H NULL suppressor of Ty 3 homolog (S. cerevisiae) EMBV3_21607 CTCAGCCTACCTGAAGCAGAACAAGTACCAGCAGGCGGAAGAGCTGTACAAAGAGATCCT Gene GeneID:517633|KLC3:NM_001038549:244_cdna Constitutive 0 NULL GeneID:517633 18 GENE KLC3 MGC134459 kinesin light chain 3 EMBV3_25531 GGTCGTGCTGGGGCGGCCGTGGGTGTGATGGTTTAGTTGTGCTTGAAGTGATTTAGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39466 TCTTGTTAAGAGTGACAGCTCCTTCCACCTGCAGAAACAGGCAGTGCAAGCATCAGACTC Gene GeneID:100296565|LOC100296565:XM_002690549:102_cdna Constitutive 0 NULL GeneID:100296565 10 GENE LOC100296565 NULL hypothetical protein LOC100296565 EMBV3_27749 GACCGGTAGTCGTCTCTGCAGTGACTCCAGCACCGCTGTTTCTTGGTGTGCACAAAGATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12697 TGAGACTGCTGCCCTACGTGATCACTTTGGGCGACGCCGTGCACAACTTCGCCGACGGGT Gene GeneID:510951|SLC39A4:NM_001046067:53_cdna Constitutive 0 NULL GeneID:510951 14 GENE SLC39A4 MGC139168 solute carrier family 39 (zinc transporter), member 4 EMBV3_20985 GTAGCAATAGTAGCAGCAGCATACAGTATGATGTGCCCTCAAAACCATTGAAAATTACCA Gene GeneID:100297903|LOC100297903:XM_002687717:16_cdna Constitutive 2 NULL GeneID:100297903 5 GENE LOC100297903 NULL hypothetical protein LOC100297903 EMBV3_33739 ACGGGCCACGTGCTTTGAGATCTTGAGTATATCCAGTAGGTGAACAGAGGACCCCACGGA Gene GeneID:617268|FAM131B:NM_001078072:730_cdna Constitutive 0 NULL GeneID:617268 4 GENE FAM131B MGC152051 family with sequence similarity 131, member B EMBV3_41055 ATCAGAGAATTTAGCCTCTTCATTTCACAGGTCCTTTTGGAATAAATCATGGGATTGAAC Variant GeneID:521261|PCMTD1:NM_001081526:32_cdna 165^596 3 EMBV3_01401 GeneID:521261 14 GENE PCMTD1 MGC143031 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 EMBV3_06114 GGCCAGTTGACCCAAGGTTTACAGTAGCACAAGCCAAAACCACAGAGTAAATAGGGAAGG Gene GeneID:540423|MPZL2:NM_001015673:122_cdna UTR3_Alt 4 NULL GeneID:540423 15 GENE MPZL2 EVA1 myelin protein zero-like 2 EMBV3_03113 CCTACCAAAAAGAAGTGGGAAAACGGGCACTGTTTGAAAGACAGAAATGAACCCTGCCAC Gene GeneID:509365|TATDN1:NM_001075402:20_cdna Constitutive 1 NULL GeneID:509365 14 GENE TATDN1 MGC140755 TatD DNase domain containing 1 EMBV3_09694 GGAATACAAAACCCACACCGACAGCATCAAGGACAATTCAAGCTTTCGAAATACAAAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03476 GCTGACTAAGCCTGAGATGTTTGAGAACCCCCTGTACGGGTCTGTGAGCGCATTCCCGAA Gene GeneID:507329|INPP5D:NM_001101882:20_cdna UTR3_Alt 2 NULL GeneID:507329 3 GENE INPP5D MGC157261 inositol polyphosphate-5-phosphatase, 145kDa EMBV3_18938 ACTAAGGTGACTGGGAAGCCACAAGGCTCCAGAGTAGTTAGGAAACACCTCCCTCCTGTT Gene GeneID:100337198|LOC100337198:XM_002700460:26_cdna Constitutive 0 NULL GeneID:100337198 X GENE LOC100337198 NULL hypothetical protein LOC100337198 EMBV3_04520 ATGATCCAGAGCTGTCCTCTCGACAATTTGGGGTTGAACTGTCCCGTTTGACCAGTGAAG Gene BVT0102_004304 + 1 EMBV3_09499 GK000002.2:121076440-121176034 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103598 1 XLOC_062161 Coding TCONS_00103598 XLOC_062161 Coding Coding LOC100847876 2:121089839-121145133 = TSS76908 1488 1 TCONS_00103598_3 495 13 0.973323928887924 0.000259736658772696 0.000783345620074744 0.000194333998717257 4.46460413510438e-05 3.61982903791562e-06 4.80787352147221e-06 2.35149927690307e-05 1.58998449869601e-05 0.000250267488252317 0.000237800335717127 0.000100501777253361 0 2.22889202279792e-05 1.05595274496621e-05 2.88080527568479e-05 0.00166847116313467 3.34723736109582e-05 0.000691350802850496 0.000248098564600559 0.000327640057215982 0.000113620333458554 0.000558544946541092 0.000659693152730291 0.000574594616486121 0.000353874441322761 0.000438388782225875 0.000295005159114539 0.000258203835655803 0.000107662720077812 0.00029495565827361 XM_005203047.1 LOC100847876 PREDICTED: Bos taurus unconventional myosin-IXa-like (LOC100847876), transcript variant X2, mRNA. 0.0 1552 100.00 0.577284946236559 NM_006901.3 MYO9A Homo sapiens myosin IXA (MYO9A), mRNA. 0.0 1342 94.64 0.576612903225806 TCONS_00103598_3 sp|B2RTY4|MYO9A_HUMAN MYO9A_HUMAN Unconventional myosin-IXa; 0.0 598 99.30 0.575757575757576 2 coding 0 0 0 0 -0.00754721868231867 0.95627766528693 -7.5949414208798e-05 0.998706395923593 ATGGCCACCGGTTCAGGCCCGGAGCATCACCTAGGCGTGTTCACCCAATCCCCGCCTCTCCACAGTGCCAATTGGCTGGAGAGGCCACGCCTTGGCCGAGTAGCCAGCAGGGTGCGCGGCGCCGAGCCGAGGGGGCGGGCTGAGGGGCGGCCCCCGGGAAAGAGCAGCCAGGTGGAGGAGGAGCGCGAACGCGACCGCAGGCCGGGCCGGGCCGGGCTGCGCTGGGCGGGGCATTGCCGTGGGCACCGGCAGGCAGGCGGCGGCGGCCTGACCTGGGATCCGCGCCGTGGGGCCCGCGTGGGGGCCGAGCAACCGGGCGAGCGGATCGACCGGCCGCCGCACGCCCTGGGGGTAGAAGAGCACAATGGTCACATCTTTAAGGCCACCCAGTATAGCATCCCTACCTACTGTGAATACTGTTCTTCTTTGATATGGATCATGGACCGAGCCTCTGTTTGCAAATTGTGCAAGTATGCTTGTCATAAGAAGTGCTGTCTGAAAACCACAGCCAAGTGTTCTAAAAAGTATGATCCAGAGCTGTCCTCTCGACAATTTGGGGTTGAACTGTCCCGTTTGACCAGTGAAGACCGAACTGTTCCTTTGGTGGTGGAAAAGCTCATAAACTACATTGAAATGCATGGACTGTACACAGAAGGTATTTACCGAAAGTCTGGTTCAACTAATAAAATCAAGGAGCTTCGACAAGGTCTAGATACAGATGCTGAGAATGTAAACCTTGATGACTATAACATACATGTCATTGCAAGTGTATTCAAACAATGGCTTCGTGATTTACCCAATCCACTCATGACCTTTGAACTCTATGAGGAATTTCTTCGAGCTATGGGCCTTCAGGAGAGGAAAGAGACAATCCGCGGTGTATACTCTGTCATTGACCAGCTCTCCCGAACTCATCTCAATACACTGGAACGCCTCATCTTTCATCTGGTCAGGATTGCTCTACAGGAAGACACTAATCGAATGTCTGCTAATGCTTTGGCCATTGTGTTTGCACCCTGCATTCTCCGCTGCCCTGACACCATCGACCCACTGCAAAGTGTGCAGGACATCAGTAAGACTACCACCTGTGTGGAGCTGATTGTTGTGGAACAAATGAATAAATATAAGGCTCGTCTCAAAGACATTAGTAGCCTGGAATTTGCTGAAAATAAAGCAAAGACCAGGCTATCACTGATTCGTAGATCAATGAACTCTTCTAATGGCGACAGTGGTGGTAGCGTCTGTAAGGTGGCCCTCATGACGCTTGTTGCCTTAGTGTCCGAAGCACTTTCTGAGTTCGAAGGGCAGGAGCGTGCAGAGGTGATCACGGAGCCCATAGTGGATGTATCTCAAGGCAACGTCAAAACCACCACCACCGAAACCGCTGCAAGGAAAGAAGCAGCGCGTGTGCCGCAGGAGGCCCTGCTGGGCTTGGACCAGTCTCGGGGTCAGAGGACGAAGCCTTGTCTGGGCTCTGCCCTGGGCTGA EMBV3_22407 GGAAGCCGGATGGCTAACGCACAGTCACTTTGTTAGTTAGGGCAGCATTAGAAATCGAGC Gene BVV0102_271083 + 0 NULL GK000023.2:49947594-49953452 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135452 TCONS_00135460 TCONS_00135451 TCONS_00135454 TCONS_00135446 TCONS_00135456 1 XLOC_081721 Coding TCONS_00135451 XLOC_081721 Coding Coding PRPF4B 23:49950551-49977929 j TSS100771 6269 1 TCONS_00135451_6 1040 17 0.771633122694232 0.000206334501702771 5.92934251582741e-05 8.58699573092824e-05 4.58324599054886e-05 9.73240860922615e-71 5.42941327990401e-05 6.69476613519068e-05 2.68407450145045e-05 0.000263847625730951 0.000494841480551557 0.000483020494192368 0.000228227453901012 0.000135712754163923 0.000482177598982764 2.42486069196115e-07 0.00493498460873155 0.0029812994453449 0.00256711859535631 0.000267678388490962 7.73401446543929e-05 5.68175492717434e-322 0.0017625568364133 0.00196644610398781 0.00497991021278287 6.39264134597103e-77 0.000121696005803302 1.20465625908966e-05 0.000602846680431856 0.000361080828778287 0.000738492725666467 XR_239683.1 PRPF4B PREDICTED: Bos taurus PRP4 pre-mRNA processing factor 4 homolog B (yeast) (PRPF4B), transcript variant X8, misc_RNA. 0.0 8170 100.00 0.722443770936353 XR_241941.1 PRPF4B PREDICTED: Homo sapiens PRP4 pre-mRNA processing factor 4 homolog B (yeast) (PRPF4B), transcript variant X14, misc_RNA. 0.0 5737 88.62 0.715265592598501 TCONS_00135451_6 sp|Q08DZ2|PRP4B_BOVIN PRP4B_BOVIN Serine/threonine-protein kinase PRP4 homolog; 0.0 1611 100.00 0.968269230769231 2 coding 0 0 0 0 1.76136497544385 0.044266878743482 0.0437416581038656 0.541499426059935 ATTCTTCGAGCGACGCTGAGCTCCACGGGTCCCGACGCTATCGGCACATGCGCGACGGCCCTGTTCTCTCTTCCTCCGCCTCCCCTGGCTTCCGCCGTCCGCGGAGCCGCCGCCACCGCTGCCGAGGAGTCAGGAAGTTCAACATGGCCGCCGCGGAGGCGCCGTCGCTGCGGGAACAGCCGGAGATGGAAGATGCTAATTCTGAAAAGAGTGTTAATGAAGAAAACGGAGAAGTCTCGGAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAGAAAAAGAAGCATAAACACAGAAGCAAACACAAGAAGCACAAGCACTCCTCGGAAGAAGACAAGGACAGAAAGCATAAGCATAAGCACAAACATAAGAAACACAAAAGGAAGGAGGTCGCCGATGCTTCTGACAAGGAAGGTATGTCTCCAGCAAAAAGAACTAAACTTGATGATTTAGCTCTGCTGGAAGACTTGGAGAAGCAGAGAGCCTTGATTAAAGCTGAACTCGATAACGAGTTAATGGAAGGAAAGGTCCAGTCTGGGATGGGGCTCATATTACAAGGTTATGAGTCCGGCTCTGAAGAAGAGGGGGAGATTCATGAAAAGGCAAGAAATGGAAATAGGTCTAGTACTAGATCTTCAAGTACGAAGGGCAAACTTGAACTTGTGGACAATAAAAATAGTACAAAAAAGCGAAGCAAAAGCAGATCCAAAGAACGGACTAGACACAGGTCTGATAAAAAGAAGAGTAAGGGAGGTGTTGAAATAGTTAAAGAGAAGGCAACAAGGAGCAAGTCAAAGGAGAGGAAAAAGTCAAAAAGCCCCTCCAAAAGAAGTAAGTCCCAAGATGAAGCCAGAAAGTCGAAGTCGCCCACCCTCAGACGGCGCTCTCAAGAGAAAGTTGGGAAGGCCAGATCTCCTGTCGACGACAAGGCTAAAGTCGAAGACAAAAGTAAGGCAAAGGACAGGAAGAAATCCCCTGTTATAAACGAAAGTAGAAGTCGTGATCGAGGCAAGAAATCTAGATCCCCAGTCGACTTGAGAGGCAAATCCAAAGACAGACGGTCACGGTCCAAAGAGAGGAAATCGAAACGGCCTGAAGCCGACAAAGAGAAGAAGCCGGTCAAGTCTCCCTCTAAAGACGCTTCCTCTGGGAAGGAAAACAGGTCACCCAGCAGAAGACCTGGTCGCAGTCCCAAAAGAAGAAGTCTGTCTCCGAAACAGCGGGACAAGTCCAGAAGAAGTCGATCCCCACTCGTGAATGACAGGAGGTCTAAACAGAGCAAGTCACCTTCTCGAACCCTGTCGCCTGGCAGGAGAGCCAAGAGCCGGTCCTTGGAAAGAAAACGCAGGGAGCCCGAAAGGAGACGCCTCTCTTCTCCAAGAACACGACCTCGAGATGACATCCTCAGCAGGCGGGAAAGGTCCAAGGACGCCAGCCCGATCAGCAGGTGGTCTCCAGCTCGCAGACGGGCCAGCAGATCTCCTGTTAGGAGGAGGTCTCGTTCCCCTCTCAGACGGAGCCGGTCTCCCAGAAGAAGAAGCAGGTCTCCTCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCGCGCCTGAGAAGGCGGTCTCGATCACGGGGTGGTCGTAGACGGAGGAGCAGAAGCAAAGTAAAGGAAGACAAATTTAAAGGAAGTCTTTCTGAAGGAATGAAGGTCGAGCAGGAATCTTCATCTGATGACAACCTTGAAGACTTCGATGTTGAGGAGGAAGATGAAGAAGCCTTGATAGAACAGAGAAGAATACAAAGACAGGCCATCGTTCAGAAATACAAGTACCTTGCTGACGACAGCAACCTGTCGGTGCCGTCCGAGCCCAGCAGCCCACAGAGCAGCACCCGCTCCCGCTCCCCGTCTCCTGATGACATCCTGGAGCGCGTGGCTGCCGATGTCAAGGAGTATGAGCGCGAGAACGTCGACACGTTTGAGGCCTCCGTCAAAGCCAAGCATAATCTGATGGCCGTCGAGCAGAATAACGGTTCATCTCAGAAGAAGCTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGTTTGCTGCCTATTTTGATAGTGCGCGTCTGCGGGCTGCTGGCATTGGGAAAGATTTCAAAGAGAATCCCAACCTCAGGGATAACTGGACTGATGCAGAAGGCTATTACCGTGTGAACATAGGTGAAGTCTTGGATAAGCGCTACAACGTGTACGGCTACACGGGTCAAGGTGTGTTCAGTAACGTGGTCCGAGCCCGGGATAACGCGAGGGCCAACCAGGAGGTGGCCGTGAAGATCATCAGGAACAACGAGCTCATGCAAAAAACTGGCTTAAAAGAATTAGAATTCTTGAAAAAACTTAATGATGCTGATCCTGATGACAAGTTTCATTGTTTGCGACTCTTCAGACATTTTTATCACAAACAGCATCTGTGCCTGGTGTTTGAGCCTCTAAGTATGAATTTACGAGAGGTGCTAAAAAAATACGGTAAGGATGTTGGCCTTCACATTAAGGCTGTCCGATCCTACAGTCAGCAGCTGTTCTTGGCTCTGAAACTCCTTAAAAGATGCAATATCCTCCATGCAGATATCAAGCCAGACAATATCCTGGTTAATGAATCAAAAACTATATTAAAGCTCTGCGACTTTGGGTCAGCCTCACATGTTGCAGATAACGACATAACGCCTTACCTTGTCAGTAGGTTTTACCGCGCTCCTGAGATCATTATAGGTAAAAGCTATGATTATGGTATAGACATGTGGTCTGTAGGTTGCACCTTATATGAACTCTATACTGGAAAAATTTTATTTCCTGGCAAAACCAATAACCATATGTTGAAGCTCGCCATGGATCTCAAAGGAAAGATGCCAAATAAGATGATTCGGAAAGGCGTATTTAAAGACCAACATTTTGATCAAAACCTCAACTTCATGTACATAGAAGTTGATAAAGTGACCGAGAGGGAGAAAGTTACTGTCATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGGTGCCAGCGACTTCCTGAAGACCAGCGTAAGAAAGTGCACCAGCTGAAGGACTTGCTGGACCAGATCCTGATGCTGGACCCCGCTAAACGGATCAGCATCAACCAGGCCCTGCAGCATGCCTTCATCCAGGAGAAGATTTAAATGAGACGAAGAAGCTCCAAGGGTTTGAGTAATTAAATACAAAGACTGAAGAAATTTCACAGCAGTTTATTAATGTGTGTGTGTGCAGGCCACAGCAGCATGCCCTGGGCGTAGTCAGTGCCGAAGGGGCCTGTTCCTTCTTGAGCCTGCCTGCAGGGACGGTCTCCTCTTTTAAAGCAGGTTGTGTACAGCATTCAGTACACTGAAGGTAAGCTGAACCATCAACATCACCGGTGTGTAAGATGTTATTTTACTGGAAGAGTTGACAAATGAGGGGCGTTAGCGTTGTGGCAGGATTCCCCGCATGTGTGAGAGCTGATCTTGTTTCTTTTCTGGCATCACAGCTGTGGGTAGGCACAGTTTCTGTTCTGTTCATCACATTGCGATTGGAGGAGAACGCGCTTGATGGGTAGAGCGCCTTCAGTGTACTGTTTCTTAGTAACTTTCGTTTTTTTAAATCAACTTGCTATAGACTTTATACACATTTTGTTAAATACAGTTCCTAGTGACAGAAACAGTGCGTAGTTTCCTTTACTGATAACACATGTTGAGGCCTAATTCTGGAAGTCCTCATATTTAAAAGTTAGATAGACAACGTAATGAAATTTTTAACTATTTGTATGTCATTTTGAAAGTGTATGCTTTATGGTAAAAAGTGTTTTTCATTTGTTCATTGTTTTCATTATTTGTGATCATGTTGTCTTTCAATACAGGCATAAACCTTCCACTCTTGAACAAAGCAGCTGCTTTTTAAAAGCGGTAATTGCTTCTTTACCTTTTATTTCTTTTGTAAAATGAAGCTTTTCTTTAAGGATGTGACTTTAAAGTGTTGTCTACTGCATAAAACAGTTGACCCTCACTTACTGTAAAGTGAAGATTGTTCTGCTGCATGTGGCGTGGACCATGCAGATTTCTGTATGTTCTCAGTATGCATCACTAGATAATAAAGTCTTTTGTGAACAAGGCATTGGTAGCCATTTTTAAAAGTTTCTGTCTGCAGTGCTGGTAAGTCAGGTAAACCACGTAGAATGAAAAGCAACCTTGCGTTTCTTCCTTTGATTCTTTAACTGAAAGAATTACTCGTTAAAGGTGTAAGCTAACCAGAAATGTGTAATTTTATTAATAATTAGGATCCTAATTATTTCATCAAAAAATTCTACCAGTATTGTCAGCTTTCAGTGTAGTGAGGTAGTTCCTGTAGGTCGTGGGGTAGAGTCCAGGATTTAACTAATGTTTCTGCTGTTTTCTCACTTTTCCTTCTGATGGTGCGGAAAGAGAACAGGAGACGGGGCACAGGCCACTCACCGCCTTCTCCAGGGTCTGATTTGCTGAGACACCAGCTGCACCTTCTTAACAAGGTGCGGCTCAGTGGAAGATGATGGCTCCAGAAGACATGAGCTAAGGTTCTGTCCCATAAAAGAGTTGAGAACAAAGAGCCCTCCGTTTAATTTCTGTCTGGTGGTTCAGTTTTCAGCATGATGATTTAGGGTGCATTGCCCTTTGGTACTGAGAGTAGTGCTCCCGTGCTCATTGTAAAGTGCTCACTCATCACGCTTCCTGCCCCTGCCCCTTCCCTCCCCCGGAGTGAAAAGAGGCGTCAGACCTAGCAGTGTTAGTGGTGTGGACGCGGAGATCCCGCCTAGCACATGGCTGTCAGAATCGGACCAAGAACATCCATCCAGAGGCAGTCTTCCGCCGCAGGGGGTCGTGTCTTCTTGGCGGATCGATGCCCAGGGATAGGAACAAGCCCTCAGCGCTGCTCAGCTCCCGGGGCGCCCACCTCTGCGGCTCACCCGTGGGGTCTGCCTAGCCAGTGCTGTCGAGGTCTTAGAATAGGCCACATACCCAGAGCACAGCCGTGGTCCTCCTCGAGGGGAGCGCGAGGGGTGTTCCCTAGGTCTCTGGTGTTCTGGGCTCAACACTCTCTGTTTGCCTCCATGAGCAGTCTTGATCTTCGCACACGGGGTGGTATTGGATCCCGTGGTCTCTGAGGCAGAGACCCAGAGCTCTGTGAGCCTGCAGGGTGGGGCAGGTGGTGCGCAGTCCCCAGCAGGCGGGCGAGCCCGTGTCGGCCGCTCTGCCATTTCTCTCAGGAAGGTTTTGCTTTATTTCACTTTGTGGCAAAAATGGTATCAAGTGATTGTGAGACTTGAGGGTCTGTAAGTCCTAGAACGTGACCCACAGAGCATAGCTTTCTCTGTAGCTAGGGGAGTGGTTGAGCCTACACATCTTAGGATCATTCTTCAGGTAGACCTGTTGTCCTCCAAGGTTAAATAAACCTTAAGACCTTCCCAGCATGAGTTCACCCTCAGTTCTTATTAATAGCATCCTTCTCCTTTATTCCCCAATGCCTGTTTCGTTCCACTCTTTTTCGCAGAGTAATTTTTGTGTTTAAAAGGAAAGCCACTTTTTTTAATCACCATAATTACCACTTTCTTTCCCTAAGACGTACCCGGGACATGTCTTTGGTGTGTGGTGGAGGCAGTGAGACGTGCCTTGTCCTTGGGTGCACGCCGCCTCCTCTCCACCTGTAGTTGATCGTGGTTTCATAGTGGAACTCTAGCTAGCTGGGGAGAAAGAGAATCTCTGCAGCAGGAATCCCGTGTCTTCAGATGCAGGTCAAACCGTTAAGGAATTCCCGGAATTCCCATCTAAATACTGAGACAGGAAGGAAGCCAGATGGCTAACGCACAGTCACTTTGTTAGTTAGGGCAGCATTAGAAATCGAGCTTCCTAAAGTGTTTTCTTCTTCGTAGCGTCCTAGTTCAAACGTGAGTTTTTATAGCAGTGTTCATTACAAATTCATTTGTTTTTTATGTCCGTTAATGTGCACCAATTTGACTTTTAAAATGCTTTCCAGTTACTTTGATAGATTTCATCATCGTGGCATCTTTTTCTCCTTCCACGTGTAGGGTAAGGGACTGTTCTGAAGAATCTTTCCGTTTAGTGATCAAGATACGGAAGCTGACCTCTGAAAATATTCAATATGTATCCTAATTTTCCCAGTGTCCTTTGAGTTGTAACTTGCATTTCAGCAGCAATGTTCCTAATTGACCTACTAGGAAAATGTAATAAACACGCCTCTTGTTACCCTGCTGC EMBV3_37992 CAGGGATGCTGGGCACACGACAAGCTCAGACTGTCCCAAAGTTGTCCCCATAATAATCTT Gene BVV0102_446790 + 0 NULL GK000012.2:34535643-34540960 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035158 1 XLOC_020850 Coding TCONS_00035158 XLOC_020850 Coding Coding SPATA13 12:34432686-34538758 j TSS25830 4535 1 TCONS_00035158_8 1193 14 0.957377605566083 0 6.90404360296978e-16 0 0 0 7.06296489156872e-13 1.01229681835705e-12 1.530762624989e-12 0 0.000370899267241804 0.00032931011984129 0.000112986360732391 3.10898077347649e-14 0 2.21325542010608e-13 0.000652827098103341 0.000107147128993676 0.000162380802752647 0 7.72989827190333e-13 0 0.000494716861696726 0.00047800925316896 0.000264512271381364 0 0 0 0.000222014212958403 0.000228915971741158 0.00032492304707911 XM_003582867.2 LOC785769 PREDICTED: Bos taurus spermatogenesis-associated protein 13-like (LOC785769), transcript variant X1, mRNA. 0.0 6653 99.84 0.816538037486218 NM_001166271.1 SPATA13 Homo sapiens spermatogenesis associated 13 (SPATA13), transcript 0.0 1970 78.92 0.507386990077177 TCONS_00035158_8 sp|Q96N96|SPT13_HUMAN SPT13_HUMAN Spermatogenesis-associated protein 13; 0.0 1051 82.72 0.498742665549036 5 coding 0 0 0 0 0.102168842806805 0.516843772222738 0.00321581628579622 0.948352990423114 AGAGCTTCGCGGGGCCAGGCAGGACCGATCCTAAGTCGCCAGGACCTCTAGGATCGGCCGATTTCGGAGGCTCCTGCGAGCGGGGCCGCTGTAGGCGGTGACTGCGGAGCCCAATGTGCACGGCGGGCGGGAAGGCCAGGCCGGAGGCCCCCAGGAAGAAGGCCTGCGCGTGGGGCCGGGGGACATCGAGGCGCGCGTGGGTCTGAGCCGCGCTGACCTGCGCCCGCGGGCCCCCGGCCCCGAGAACATGACCACGGCGCAGAACGGCCACGGGCGCGGAGCTGCGGTACCTGGTTCCATCTCTGACCCCAAGGACCCCGGCATGGGGACCCACTCGGCGTGCCGCAACGGCGGCTGCAGTGGCGGCGGCGCAGGCGCCCGGGAGGCGCGGCTCAGCCCGGCCCGCATTCTGCGCCTCTTCTCTGCCGGCCCTGGCAGGACGCGCGCCGACCGCGAGCGGCCCCGGCCCGCCGGCCTCGTGGGCAGCTCGTCCACGTGGAACGCCCTGGCCTCCTTCCGGAAAATGGGCTCTTTCAAAAAACTCAAGTCCTCGGTCCTCCAGGGCATTCAGAACCGGGAGGGGTGGGATACGGCGAAGGAGGGAACCTCGGACCGCGATCTGGGCAAGTCCGTCCCCAACGGCGAGGCGGCCGGGGCCCTTGGGGGCAGGTGTGCCCCTGGGCCCGGCTTCGCCTCTGACGGTTCGGACCCCGAGGAACCGGACGAAGGCTTCGCGCGTAATGCCCTCCGGTCACGGAGCCTCCGACGTGCCTACGGCCTGGGGCGCATCCGCCTCCTCGACCCGGAGCCCCTCCGGCCGGCGGCGTGCGAGGCACCGGAGTGCCTAGCACGCGAGCCCGAGCGGAACGGTGTCTGCCGGCGCAGCAAGAGCACGGACAGCCTGACCTTCCTCGGGAAGAGCTCCTTCCGAAGGAAGTCCGCCTCGCACTTGGCCGAGCTGCGGGCCGCGCAGGAGGGCCGGGGGCCCCGCAGGACCCTGAGCGGCTCTTCCGCCGACTCCGACGGCTCGGGCGGGGCCCCCACGAGGCCCAGGCGCTGGAGGAGCCCGCTGCGGGTGCCGGACCTGGCTCGCGTGCTCCGGCTCGCGGGGGGTGGCACGGCCGGCCGGACTGGTGACCCCGGGAGCGCAGCGCCTGGGCCGCGGCCACTCAGCCGGCTGCACGATGACTACTCCCGCCGCGCGGCCGCTGCCCCCGAGGGGTGCGGACGGGGGCGTGCGGAGCCCCGAGACCCGGTCCCAGTGGGTGCAGGAGGACCGCCCAGGGCAGTGGTCCCAGGAGGTGCGGCTCCTCGCGCCCAGGGCTCTCTGTCCAGCCCACCGGCCCGGGAGATGTCGGACAGAGACTCCGACGAACCGGGACCTGGTGACCGGTTTCCCTCGGAGCCTGAGCATCCTCTAGGGCCTCTGAGGCCCACCACGCCCAAGCCTCCCAGCCCTCGGAGCCCCGATGCAGCGAGTGCCAAGTGTCCCAGCAGTGTCAGCGCGCTGTCCCTTAGCTCAGCGGACAGCGAGGAAAGGGCCGAGGGGCCCGCGCAGAGGGAGCAAGGTCTCGGGTCCTCCCAGGAGGCCTTGCAAGCCACCTGTGACCAGGGCAGGGAGGACAGTGGAGCCAGCAGTCACGCTCAGCCCAGCCATGGAGGGGCGGACGGTCCAGAAGACAAGACAGAAGAGATTAGGGTTGTGACCGAGGGGTCCTGGAGGCAGGCTCCCCCACCGGAGGAAGAGAGGACGGAGGCTCAGAGGATCCCCAGGAGGAGACTGGGGTCTGGGAGGAGGTCAAGGCCCCGACCACTCTCTGACTATGGCCAGCTGGTCGCCCGAAGTCTGTCTATCCCAGAAGACTCGATCGCCGTGGACCCCCAGAAAGAGGACGCTGTGGACAGTGACCACCAGCCCAGCGTGGCCCCCACAGACCCTGCAGACCAGACTCCTGCTGGGGGCTATCCCCAGGGGGGCCCAAGAAGACGCCCCATCTCTGTGATCGGTGGGGTCGGCTTCTATGGGAGCAGCCAGACGGAGGAGGGGGAAGCCCTCCTGCCCCAACCCGCCGCCCGGCCGCCCGTGCCCGCACATCAGGTGCCGCCCTACAGGGCGGTGTCAGCCCGGCTGCGGCCCTGCGCCTTCTCCCAGAGCACCCCCATCGGGCTGGACCGTGTGGGACGCCGGCGACACCTGAGAGCGTCCAACGTTTCTTCCGATGGAGGTGCGGAGCCGTCTGCCCTAGTGGATGACAACGGCAGCGAGGAGGACTTCAGCTACGAGGACCTGTGTCGGGCCAACCCCCGATACCTGCAGCCGGGTGGGGAGCAGCTGGCCATCAATGAGCTGATCGGCGATGGCAGCGTGGTCTGCGCAGAGGCCCTGTGGGACCACGTGACCATGGACGAACAGGAGCTGGGCTTCAAGGCGGGGGACGTCATCCAGGTCCTGGAGGCTTCGCACAAGGACTGGTGGTGGGGCCGCAGCGCAGACAGGGAGGCATGGTTCCCAGCCAGCTTCGTTCGGCTGCGCGTCAACCAGGAGGAGCTGTCGGAGGGCTCCAGCGGCAGCCCCGGCGAAGAGCAGGAGGAGGACACGGGTAGGGCCCGCCACAAGCACCCCGAGAGCAAGCAGCAGATGCGGGCCAACGTGGTCCAGGAGATCATGGACACCGAGCGCGTGTACATCAAGCACCTCCGGGACATCTGTGAGGGCTACATTAGACAGTGTCGCAAGCACACGGCAATGTTCTCGGTTGCACAACTGGCCACCATTTTTGGAAACATTGAAGACATTTACAGATTCCAAAGAAAGTTCTTGAAAGACCTTGAGAAGCAGTACAATAAAGAGGAACCTCACCTGAGTGAAATAGGGTCCTGCTTCCTTCAGCACCAAGAGGGCTTCGCCATCTACTCAGAGTATTGCAACAACCACCCGGGCGCCTGCGTGGAGCTGGCGGGCCTGATGCAGCAGCGCCGCTACCGGCACTTCTTCGAGGCCTGCCGGTTGCTCCAGCAAATGATCGACATCGCGCTGGACGGCTTCCTGCTGACGCCCGTGCAGAAGATCTGCAAGTACCCGCTGCAGCTGGCCGAGCTGCTCAAGTACACCGCGCCGGAGCACAGTGATTACGACAACATAAAGGCAGCATACGAGGCCATGAAGAATGTCGCCTGCCTGATCAATGAGCGGAAACGCAAGCTGGAAAGCATAGACAAGATCGCACGGTGGCAGGTGTCCATCGTGGGCTGGGAGGGCCAGGACCTCCTGGAGCGCAGCTCGGAGCTGATCCACTCCGGGGAGCTGACCAGCGTCACGCGGCAGGGCAAGAGCCAGCAGCGCACCTTCTTCCTGTTCGACCACCAGCTGGTGTTCTGCAAGAAGGACCTGCTGCGCAGGGACGTGCTCTACTACCGCGGCCGCGCCGACACGGACGCCGTGGAGCTGGTCGACCTGGAAGACGGCCGCGACGGCGCCCGCGGGCCAGGCCTCAGGAACGCCTTCAGGCTGGCCAGCCGCACGGGCGACGAGGTGCACCTGTTCTGCGCCAGGAAGCCCGAAGACAAGGCGCGGTGGCTGCAGGCCTTCAGGGACGAGCGCCGGCGGGTGCAGGAGGACCGGGCGCTGGGAATGGAAATTTCAGAAAATCAGAAGAAACTCGCCATGTTAAACGCTCAAAAGGCAGCACACGGAAAGTCAAAAGAAATGTTCGGTAGAAGCCCCAGCCCAGCACTTTATCAGTTGGGAATCTCTACAAGCCCAGCCTGCTGGTTCTCGACGCAGATCAACTCGGTTACCCAGCTGGGACACAGCAGCCCAACCACCTGAGCCAGGGAAGAAACTGGAGTGTGTAATGTTTGGGAGAATAGAAACAAACGTGTCCCTCACCACTGAGTGCCAACAAGTGTGGATCCATGTGGCTTGCTGGCCAGGGATGCTGGGCACACGACAAGCTCAGACTGTCCCAAAGTTGTCCCCATAATAATCTTAACCTACAAATTGTCTTCCTATTAAAATGTCACCTGGCTAATGCTGTTCTCAGGATGTACGCAACAAAGGTGGAATCCAAGAGACTCTGAAAATAACATGTAGAAAACATCTGATCTCGGAAAAAACCTGGAACTTAAAACACTGGACGCACATTTAGTGACAACAAACTTAACATTACCTTCTTTGTTGTTTATTAGGTATCCAGCACGAATTTAGAAGATACTGTAACTGTGATTTAACAATTGGTCTATTTTTTTTTTTTTGTAAATATCAACATCCGTCATGTTTGACTTACTTACTTTTCAAGTCTTTCCAGGCCCTGTTCCTTCAATTCTGACTCGTCAACATCAAGACGATGTTATCTGTCAAGGTCAAGTGACAGCTTCCCAACTGATGACATAGCTGTTGTCAGCTGACATATGTTGTATAGGATTGTTTGTATGACACGTATGTACTTTCTCTGAAGTTTTTGTAAAAAAAATTTTATTTACAATGTTATTTGAATGATTTCTTGTAAATGCTGTGAATCTATATTTGTTGTTTT EMBV3_01315 AGAACTCTTCTGTGCGTCCTGCTCGGCCTAGACCATTTTTACAGACCTAGGCACGGGACA Gene GeneID:538427|ANP32A:XM_002690484:420_cdna UTR3_Alt 2 NULL GeneID:538427 10 GENE ANP32A ANP32D HPPCn LANP acidic (leucine-rich) nuclear phosphoprotein 32 family, member A EMBV3_31687 AAAACTCTTTTGAAGGTTGTTGGGCAGCTAACAAGGTAGAAGATTCAAGGCTCAGTGTGG Gene GeneID:532789|PAWR:XM_002687175:11_cdna Constitutive 1 NULL GeneID:532789 5 GENE PAWR NULL PRKC, apoptosis, WT1, regulator EMBV3_01742 GTGGCCCCACATTGCCCTGAACATACCTGCCGGTCACCATAGGTCTTGATAAGAAAACAA Gene GeneID:281848|IGF1R:XM_002696504:87_cdna Constitutive 0 NULL GeneID:281848 21 GENE IGF1R NULL insulin-like growth factor 1 receptor EMBV3_38913 ACTAGCTCTCCAGTTTAGCTTCTCCTACTTACCCGTGAGATGATTGAGGTCCACAGAGTC Gene GeneID:534257|LOC534257:XM_002685280:64_cdna Constitutive 0 NULL GeneID:534257 2 GENE LOC534257 NULL similar to cytochrome b reductase 1 EMBV3_29582 ATGGACTCTGACCTCGGTTACAGGAGGAGAAATCCCGAACCCCGTTGCACCATCTGTGCA Gene GeneID:618441|SEPX1:NM_001034810:306_cdna Constitutive 1 NULL GeneID:618441 25 GENE SEPX1 MGC128294 selenoprotein X, 1 EMBV3_26995 CCCTCGCGGCCCTGTGCTGCGGTGTGACGGTTGTGCCAGAAGATTCCAGGATGACTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32259 ACTGGTTCGAGAGCCTGGCGCAGTGTCTGCACTGGAATGTGCGGAAGAAGCAGGCCCACT Gene GeneID:513419|NADK:NM_001034445:103_cdna Constitutive 1 NULL GeneID:513419 16 GENE NADK MGC128269 NAD kinase EMBV3_33683 TGCGCGTTATCTCCAGTCTACTCCGTGCCTTAATGTCTGTGCTGACTCCACTGCTGTTGA Gene GeneID:783202|LOC783202:XM_002696332:22_cdna Constitutive 0 NULL GeneID:783202 20 GENE LOC783202 NULL similar to Cytochrome c oxidase polypeptide VIII-liver, mitochondrial precursor (Cytochrome c oxidase subunit 8-2) (IX) EMBV3_10653 CTGCTCCGTTTCGAGAGTCAGAAGACTGCTGTGGAAGCTCCGGTGGCTCCTTCAGATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35917 GGCAGGTGGCAGGTTGGACCCACACTTTCATGCTCTAGGTATCCTTCTGAAATTCTAGTC Gene BVT0102_028820 - 0 NULL GK000020.2:15559850-16780183 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114658 TCONS_00114659 TCONS_00114660 1 XLOC_069324 NonCoding TCONS_00114659 XLOC_069324 NonCoding NonCoding - 20:16686979-16697918 - TSS85456 3459 3 TCONS_00114659_3 94 0.0815264527320035 3 0.684037301151947 0.00158718673209905 0.000178704949615236 0.00146614691610391 6.81596384224702e-08 2.06892449896196e-07 0.000247691402312951 0.000428103828225048 0.000220188018090101 1.54032852418864e-11 4.96638512195704e-67 7.90357265884311e-05 4.99414475125625e-06 0.000281311726030169 2.63603488583588e-05 0.000139616911599981 3.49169763511449e-10 3.08985221690127e-67 0 0.0011061356594237 0.000641640749220673 0.000305286240953632 0 0 0 0.0011110129020972 0.00072768159350898 0.000728029131067638 3.7256631106561e-05 5.68133114456435e-06 0 XM_005227966.1 MDR/TAP PREDICTED: Bos taurus ATP-binding cassette, sub-family B (MDR/TAP), 1e-32 147 91.67 0.0309337958947673 0 noncoding 1 0 1 1 -3.02771666171308 0.0313683699487549 -0.0457383987173918 0.456335300641699 TGAGCCCGCAGGCTGAGGGAGGGAGTGGCCATAACTGGAGACAGGGGTTGGTGGTGACTCAACAATCCCCCAGGCTTCCACCCACAACCTCTGAAGGAATCCAGGAGAAAGCCCAGGGTCACAGTGGGAGTTCCACTCGATCAAGGTCTCGCCCTCCTTCAACCAGCCTCTAATCTGGTTGCAAAGTCAGCTTTCTTCCACTCAAATTAAATTCTTTTCTAACTCTCAATATGAACTGCTCTTTTCTCCTCTGAGAGCTGTGGTTGTAAACCTGTGATTACCTTGCAGGAGCAAGCTCCCTGCATTTTCTAAGGGTGGTTTCTCGGCAGAGGTAGCGTTTTTTAACGTGGTTATGCCATGATGGGAAGCGAGGTGTTTCACAAGGAACTTCTTAGTAAAGTTGGACGTGAATGATTTTCTACAGCCTCCACCGTGCCATCTCTCCTGAACGTCTTCATCCTGGACAGATTCCAGCGCCTTCTTAGTTGTGGCCCCTGTGCCCAAAGAGATAGAAGGAGAGCCGCACACACCACCAGGGCTCTGGGGGCTGCTCCGTAATCCCCGGGAGGAACGGGCCACAGGAGCTGCTTGACGCCCACAGTTCCCTGAGCCAGAGGACCACCCTCATATTCCTGAAAGAAATCCAAGGCTTGGGGCATGGCCTCCTCAGACAGCAGAAACGGCCCGCCAGCCCCTCTGTCTGCAGCATGGAAGCCCTTCAGTGTCTAGTAAAGTGAGTCATCATAACGAGTAGGGGTACAAGTAGAGGGTGGCAGCAAGAGGAGCACCGAGTGTCTGCAGAGAAGCTTGGGAACCTGCCTGAGATAAACCTCCACAAGGAAAAGGAATAGAAACTCAGCACTGGGCTGGCAGACTGGACGTGCAGCTGTCATGTGAAACTGACTCTGGCATGTAAACACTCATTCTGTATTTCTGTGCCCAGGGTCCAGACACAGCAAAGAGGTCTGAGGAAGCTTTGCTGTTCTTCGGGTTATTCTTTGACTCTCAAGGCGTTTGGCTGGATGGTTTCAAAGGAGGTGATCCTGTTTTAAAAGTTCTCCTAAAGAGGAGACTCTGTGGCTTCCCCTGTTAGTCCTTTTTCAGCCTGTCTGAGAGCTACGGGGAACACCTTGCCTGAATTCTGCATGTGCTGTTTTCTAGTTGTTTCCTCCTGCTTTGGCTTCAGTGATGAACAGAAAGTTAGGCGGTAAAACAACACAAACAGCACACAGCAGAGTGTGGCCAGTGTTGGTATCTTATATAAATGTTTGGCCTTTCATACCAGTTCCCAGGCTCTTTGTTTAGCTGGGCAGGTGGCAGGTTGGACCCACACTTTCATGCTCTAGGTATCCTTCTGAAATTCTAGTCTCTTCCAGCAAATCTACCTTATCACATAGCTCATTTCTGTTCATGACAGGTGCTGTTCTCTTTCAGAAAATCCCATTTTAACTAAATGAGCCCAGTGGGATGGCCTCGCCATTCCCTTTCCAGCTGAGCTGAGTTCTCCGCGGGCAGTAATGTTTCCTCAGTCCACTCTGGAACCAGTCAATAGGAACAAGAGATGCTGTCGTATATAATTCAATAGAAATGAGCTAAACAGACAGCCTCTAGGCAGAGAACTCCATTGATTCCTCTTTATCAGTCATAATGCAGTGACTTAGGTATATAGATAACAGATATGAGTACATATGTGCACAAAGATTATGTGCAAGCACATTCGTCGTGGCATTATTTGTGGTAACTCCAAACTCAAAGCTTCTCAAACCTCCCTCGGCAATCTGATGAATGGGTTGTGGTGTGTTCACACAATGGAATGTTACACAGCAGAGACTGAACAAGTTAAAGCCACAGGCCGGTGCGGGAGGGAAGACTGCCTGGAGATGTGCCAAGGGACACAGAGCTACTCTGCCGGGGCTGCCTGTACAGGGGTGGTGTGGGGAGAGAGAATGGCAGGCTGTCTGCCCAGCAAGTAGCCTGAAGACAGACCACACGGAAGCCTCTGTGCTAGGTGTCAGGAGCAGGAGGTAACTCAGGAAACCTGTAGGAGGGAGAGCATCAGAGATCCTTTCTCCCAGCAGATGGTCTCCTATGGGGCATTCTGCTTCGCCGTGCCTCCATTTTGACAAAGAGGGTTCAAGGTGGTCTGTGTCTATCTTTCAGAGCCTTTATTGCCAAAATGCAATTAGAGAAGGGATGGCTCAGATGTGGTATTCAGACTATCAGAATATTTATGTTAGAATCTTGGCTTTTGTGGAAACTTCTTAAATCATCCAAATGGGTCCCTGGAACCAGAGGCATCCAGTTAGAATGGCCTTTTCCATTTCCTGCCTCTCACCAGGAATGGATGAATCCATTACCCGAGCAGAGATTGAAGAGTATGTTGTTAATGGTTTATGGCTGTGCATCCATCATCAGATGAATTATATGTTGATTTCCAGGAAATTGGAAAATCAGAGTAATTTTTAATTTATGAGGATATAAGTTGGGTAGTTAGGTTCTACTCTCTATATATTGATAAATACTCTTATTAACTGATTTTTAGGAAGATGGATACATGTGTTAAGTAATGGAAAATTTCTACAAATGAGAAATTTTTTTGCTAGAAACACTTAAACCCCCCAAAAAAGAAAAAAACAAAAAAAAATCAGCCCTCTGAAGTTCTTTCATTACAGTGCCATCAAGGAGATAGGAATAGCCTAAAATGGCCAGAACTCAGATTTAAAATCACAAATTCAGCATTCAGCATTGTCAAACCCGCAAGTACACAGGCCTGTCTAGACGAGGCGATTCAACATTAATTTTATCAAAAGTTGATTTATAGGCTGTGCCTAATTTGTGAGTAATCTTTGAGTTCAGAGAAATTGCTTAGTTGAAATTTCATTATGTATAAAGTTGTTTATATCTGGTTCAGATCCTGAAACTTTGCAATTTGCCAGCTGTGGACTGAGAGGGGAAAAAATGTCTGACAGCTTTAAATGGGAAGACTAAGGCTGAGTTAGCTTTTAAGACCAAACCAGGGTTTTTAAAATTTTGGTTCATTAAGCAAGGAGACTATTGAAATTTATTCATTATGAAGGAGTGATACTTAACTGTGCCTCAATATTTATTATTATTATTACAACATCAGATCAGATCAGTCACTCAGTTGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTACATTACAACAGTACTGGGCAAAAATTATGATGTAAAATTTGTTTCTAAATTTCTTTCTCCTGTGGTATCTCTTTCCTTTTCTTACTTACCTGGGGCCCCAAGCCCCAGCCAGCATTGCTCTAGGCTTGCCTGAACTTGAACATGGGTGTCCTCTGTTCATTTGTTTGATCTTTAGTCCATTCATTCACCCATCTATCCATCTACCCAATATGTAGATTTATTTAACACATACTATTCTACTGTGCAAC TCONS_00114665 TCONS_00114666 TCONS_00114667 TCONS_00114668 TCONS_00114669 TCONS_00114670 TCONS_00114671 TCONS_00114672 TCONS_00114673 s 3' 90298 TCONS_00114665 TCONS_00114666 TCONS_00114667 TCONS_00114668 TCONS_00114669 TCONS_00114670 TCONS_00114671 TCONS_00114672 TCONS_00114673 s 3' 82104 EMBV3_25254 CCTGGGTATTTATTCTCTATTTATTGGGGATAGAAGAAGAGGAGCCCTGCCTGGGTGGGG Gene GeneID:531141|SEMA3F:XM_002697033:472_cdna Constitutive 0 NULL GeneID:531141 22 GENE SEMA3F NULL sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F EMBV3_18583 GCTGGACACGATTTAGCAGCTAAGCAACAATACCACCATAAAGGTGACCAGTACACCTGG Gene BVV0102_185230 + 0 NULL GK000016.2:47638274-47645899 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19795 GGAGTGGAGACCCTTTTGCAGAGCTCTTTGATTTCTCCTCCTCGTCTTTCTCCTTCAGTC Variant GeneID:533668|DNAJB2:NM_001034592:101_cdna 481^573 1 EMBV3_22080 GeneID:533668 2 GENE DNAJB2 NULL DnaJ (Hsp40) homolog, subfamily B, member 2 EMBV3_31168 GGGGGCAATAATCTGCCTCCTAAAAGGGGTACTTGAGGCCTGACCTTTGTATATACTTCA Gene BVV0102_117462 + 0 NULL GK000005.2:95549267-95568129 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12613 GGCTCCAAAGACGTTCTCTCTTCTCCTTCACAAGCACCGAATGAGATGGGGACTGCGATT Gene BVV0102_046953 + 0 NULL GK000019.2:24023407-24112442 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092800 1 XLOC_056984 NonCoding TCONS_00092800 XLOC_056984 NonCoding NonCoding - 19:24032825-24033598 - TSS69747 773 1 TCONS_00092800_1 46 0.476067270375162 1 0 0.000193612834589354 0.000103994071948333 0.000490832586396177 2.14855740560039e-05 9.58054810545199e-05 0 0.00132024726950081 7.65164347565481e-06 0.000132693082305588 6.38837238803594e-06 6.38084043548907e-23 0 0 0 3.17348066058499e-05 0 0 0 0.00130802319634725 0.000381434680019975 0 0 0 0.000130126587615714 0.000277857239678656 0.00162237191552206 0.00161448036124461 0 5.73529823182772e-30 0 XM_005192950.1 CUL7 PREDICTED: Bos taurus cullin 7 (CUL7), transcript variant X1, mRNA. 5e-10 69.8 69.63 0.228978007761966 NM_006814.3 PSMF1 Homo sapiens proteasome (prosome, macropain) inhibitor subunit 1 (PI31) (PSMF1), transcript variant 1, mRNA. 1e-17 95.1 71.94 0.228978007761966 0 noncoding 0 0 0 0 -0.467520172451023 0.0727396251717572 0.0236488645293662 0.619444517540047 AGGGCCTGGGAACCTGCCGCTGAGACAGCGCCCAGAAAAGATGAGCTAATGTTGCTTTTCTCTGAAATTCTCTCCTACCTGCTTTGCTTCATTAGGCTTAATTAAACTGCTCACTCTGGCTCGGAGGGGCGTTCCCATTCGTTCGCGTTCAAGAGGCTGTCCTCTGCTAATATTAAACAGCTGATCTAAGTGTTTATTACGGCCAGGCGCTGTGTCTGGGGCTCCAAAGACGTTCTCTCTTCTCCTTCACAAGCACCGAATGAGATGGGGACTGTGATTGCCCCATTTTAGAGAGGAGGAAGACTAAGAATTCTGCAGAAGTTGCGGCAGTAAGTTAGTGGTGGGACCAGAGCTGGAATCCCAGACTATTTGGCTCTCAGGCATCTATTTACCTCCACGATGTGCTGTCCCCACAGCACCTCTCCAGAGCTTCTGAGCAAGGGTCTTGGAGCAAAGTGGGTTTGCGGCCCTTGAGGAATGGAAGTAAAATGTGCACACTGGGTAGTTTTTGTTTTTAAGTACCTTCAACTCAAAACACATCTTTTTTTTAATTGTTTAAGGCAGTTGGAATTGGATGTTACAATTGAACGTGTCCTTATTGAGACCGAATTTACATAAAGCTATTTGACCATTTTAAAGTCTGCAGTTCAGTTTTTATTATATTCACAGTATTGCACATCCATTACCAGAACATTTTCATCACCCCCAAGAGAAACCACATAACCCTTAAGCAGTCACTCCTCACCTCCCTCTGCCCCTAGCCCCAGGCAACC TCONS_00095855 r 5' 9371 TCONS_00095855 r 5' 9371 EMBV3_39385 CAGTGGAAAATACAACTTCATTCCCGAAGTCTGGGCAGAGGTCTCAGAGAAGGCTCTGGA Gene GeneID:518897|CHEK2:NM_001034531:59_cdna Constitutive 2 NULL GeneID:518897 17 GENE CHEK2 NULL CHK2 checkpoint homolog (S. pombe) EMBV3_18121 TATATTTGGCATACTTTGTGCATGCAGCAGGACATTTGGGCTTCCAGGACAGTTTCGTCA Variant GeneID:615371|NFIA:NM_001038209:78_cdna 642^707 1 EMBV3_39608 GeneID:615371 3 GENE NFIA MGC128467 nuclear factor I/A EMBV3_19322 CATGGTAATTTTGAAGGATGATTCCTATGATGTGTATTGGGGCGGGGGGTAGGGCTGCTG Gene GeneID:514455|TM9SF2:XM_002691977:61_cdna Constitutive 1 NULL GeneID:514455 12 GENE TM9SF2 NULL transmembrane 9 superfamily member 2 EMBV3_40570 TCCAAGGAAGGCGAGGGTGATGGTCCAGATGGAGACGCAACTACAGAGCATTTTTGAGGA Gene BVV0101_069586 + 0 NULL GK000009.2:70551765-70588606 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237648 TCONS_00237649 TCONS_00237650 TCONS_00237651 TCONS_00237647 1 XLOC_144767 Coding TCONS_00237648 XLOC_144767 Coding Coding MED23 9:70517803-70573497 j TSS177615 5205 1 TCONS_00237648_8 1371 29 0.907061928788178 0.00212070742003401 0.00221728005859385 0.000913189646788017 0.00135371719113662 0.000312179808587595 0.000197094409733314 0.000328649127873686 0.000444648471354778 0.00042411787292483 1.28593307529956e-08 4.2827511780777e-06 7.80467674702789e-06 9.69544044085343e-05 3.27004296243247e-07 2.75752515476701e-12 0.00174934673301158 6.053868348378e-07 0.00120248840234403 0.00117388177234051 0.00278990676331946 8.3550726912778e-06 0.000760375804572983 0.000456251689329454 2.0453223062757e-07 0.00228886004192534 0.000807041387064533 0.00108869513568022 0.000240455943639808 0.000285075741760042 0.000898461953743283 NM_001205762.1 MED23 Bos taurus mediator complex subunit 23 (MED23), mRNA. 0.0 8998 99.88 0.9611911623439 NM_004830.3 MED23 Homo sapiens mediator complex subunit 23 (MED23), transcript 0.0 6556 87.78 0.998078770413064 TCONS_00237648_8 sp|Q9ULK4|MED23_HUMAN MED23_HUMAN Mediator of RNA polymerase II transcription subunit 23; 0.0 2796 98.10 0.99708242159008 1 coding 0 0 1 1 0.131385639272125 0.621922794137567 -0.019528188342659 0.810225898796605 GCTCCAGGCTTCCGTGCGGGTTCCGGCTGATTGCTGGGCCCGGGAGGGGACAGTGCCGGTTTGGCGCCCAAGGAAAAAGTTGACCCCGGCGAGTGGAAGTTACCTGCAGCGTCTCCGGCCCTCTGCCCGTCCATTGACGGAGCTCGGGCCTGACCCGTGCCGCGCTCCTGGCGTCCAAGGAAGGCGAGGGTGATGGTCCAGATGGAGACGCAACTACAGAGCATTTTTGAGGAGGTGGTGAAAACGGAGATTATAGAAGAGGCTTTCCCTGGCATGTTTATGGACACCCCTGAAGATGAAAAAACAAAACTTATTAGCTGTTTAGGGGCCTTCAGACAATTTTGGGCTGGTCTTTCTCAGGAATCTCATGAACAGTGCATCCAGTGGATTGTTAAATTCATTCATGGCCAGCATAGTCCTAAAAGAATTTCTTTTCTTTATGACTGCTTAGCAATGGCAGTCGAGACTGGTCTCCTTCCACCCAGGATGGTTTGTGAATCCCTGATAAACTCTGACACACTTGAATGGGAAAGAACACAGCTTTGGGCCTTAACATTTAAACTGGTTCGGAAAATAATTGGAGGGGTGGATTACAAGGGTGTTCGAGATCTCTTAAAAGTGATTTTGGAGAAAATCTTGACAATTCCCAATACAGTGAGCTCAGCTGTTGTACAGCAGCTTTTGGCAGCAAGAGAGGTTATAGCATATATCTTGGAAAGAAATGCTTGTTTACTACCAGCATATTTTGCAGTCACAGAGATCAGGAAACTATATCCTGAGGGAAAACTTCCACATTGGTTACTTGGAAACCTGGTATCAGACTTTGTGGATACCTTCAGGCCAACAGCAAGGATAAACTCCATTTGTGGCCGTTGCAGCCTTCTACCAGTTGTAAATAATTCGGGTGCCATTTGTAATTCATGGAAATTGGACCCTACAACTCTCCGTTTTCCTTTGAAAGGCCTTTTGCCATATGATAAGGATCTGTTTGAACCACAGACTGCTTTGTTGAGATATGTTTTGGAGCAGCCTTATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAATAAGCAGCACAAGCAGCGCTGCCCTGTGCTGGAGGACCAGTTGGTGGATCTGGTGGTTTATGCCATGGAGCGATCTGAGACCGAGGAGAAGTTTGATGATGGGGGAACGAGCCAACTCCTCTGGCAGCATCTCTCGAGTCAGCTCATTTTCTTTGTGCTTTTCCAGTTTGCAAGTTTCCCACATATGGTCCTTTCTCTTCATCAGAAGTTGGCAGGGCGAGGACTGATTAAAGGCAGAGATCATCTTATGTGGGTTCTCTTGCAATTCATTTCTGGAAGTATTCAGAAAAATGCACTAGCTGATTTTCTTCCTGTCATGAAGCTCTTCGACCTTCTGTACCCAGAAAAAGAATTTATCCCAGTTCCTGACATTAACAAACCCCAGTCAACTCATGCCTTTGCCATGACCTGCATTTGGATTCACCTCAACAGAAAAGCCCAAAATGACAACTCCAAACTACAGATTCCAATACCTCACTCCCTAAAGCTTCACCATGAGTTCCTGCAGCAGAGTCTTAGAAATAAGAGTTTACAAATGAATGACTATAAGATCGCCCTGCTATGTAATGCATACTCTACAAATTCAGAATGTTTTACGTTACCTATGGGAGCTCTGGTGGAGACTATTTATGGAAATGGAATTATGAGGATACCACTTCCTGGAACGAGCTGTTTGGCTTCAGGATCTATTACGCCCTTACCAATGAACCTCCTGGATTCACTGACGGTTCATGCCAAAATGAGCCTTATCCACAGCATTGCTACCAGAGTGATAAAACTTGCTCACGCAAAGTCCAGTGTGGCCTTGGCTCCAGCCCTAGTGGAAACTTACAGCCGTTTATTGGTCTATATGGAAATAGAATCTTTGGGCATCAAAGGATTTATCAGTCAGCTTCTGCCAACTGTTTTTAAGTCTCATGCCTGGGGTATCTTGCATACGCTTCTTGAGATGTTCAGCTACCGGATGCACCACATTCAGCCCCATTACAGAGTTCAGCTCCTAAGTCATCTTCATACTTTGGCTGCAGTTGCACAGACAAACCAGAACCAGCTCCATCTCTGTGTTGAGAGTACTGCACTCAGGCTTATAACAGCACTAGGTAGCTCAGAAGTACAGCCACAGTTTACACGCTTCCTCAGTGATCCCAAGACGGTGCTCTCAGCGGAATCCGAAGAACTGAACCGTGCCTTGATACTGACCTTAGCTAGAGCAACTCACGTAACAGATTTTTTCACAGGCTCTGATTCAATTCAGGGAACTTGGTGTAAAGACATACTTCAGACCATCATGAGTTTTACACCTCACAATTGGGCTTCACATACTCTTAGTTGTTTTCCAGGCCCACTACAGGCATTCTTTAAACAAAATAATGTACCTCAAGAGAGTCGTTTTAATCTGAAAAAAAATGTGGAGGAGGAGTATAGGAAGTGGAAGTCAATGACCAACGAAAATGACATCATCACCCACTTTTCTGCACAACGTTCTCCTCCTCTCTTCCTTTGTCTGCTCTGGAAAATGCTCCTGGAAACAGATCACATTAATCAGATTGGCTATAGAGTACTGGAGAGAATTGGAGCCAGGGCCTTAGTAGTCCATGTGAGAACTTTTGCAGATTTCCTGGTATATGAGTTCTCTACGTCAGCTGGAGGTCAGCAACTCAACAAATGCATTGAAATTCTTAATGATATGGTATGGAAGTACAACATTGTTACACTGGACAGATTAATTCTCTGCCTGGCCATGCGTAGCCACGAAGGGAATGAAGCCCAAGTTTGTTATTTCATAATTCAGTTGCTGTTACTCAAGCCAAATGATTTTAGAAATCGAGTAAGTGACTTTGTGAAGGAAAATTCCCCAGAACACTGGCTACAGAATGACTGGCACACCAAGCACATGAATTATCACAAGAAATACCCGGAGAAGCTCTATTTTGAGGGCCTGGCGGAGCAGGTTGATCCTCCTGTGCCGATACAGTCTCCATATCTGCCCATCTATTTTGGAAATGTGTGTCTCCGATTCCTCCCAGTGTTTGATATAGTAATCCACAGGTTTTTAGAGTTGCTCCCGGTATCCAAATCACTGGAGACTCTACTAGATCACCTGGGAGGCTTATATAAATTTCATGATCGTCCAGTGACTTATTTGTATAATACTCTGCATTATTATGAAATGCACCTGAGAAATCGCGAAAGTCTCAAACGAAAACTTGTCCATGCAATCATTGGGTCGCTCAAGGATAACCGACCACAGGGCTGGTGTCTAAGTGACACTTACCTTAAAAATGCTATGAATGCACGAGAAGACAATCCCTGGGTCCCAGACGACTCTTACTACTGCAAATTGATTGGCAGACTGGTAGATACGATGGCTGGCAAATCTCCTGGTCCATTCCCAAACTGTGACTGGAGGTTCAATGAGTTTCCCAACCCCGCTGCCCACGCACTGCATGTTACTTGTGTGGAACTCATGGCCTTGGCTGTTTCCGGCCAGGATGTTGGAAATGCTCTTCTAAATGTTGTCCTGAAGAGTCAGCCTTTAGTGCCAAGAGAGAACATTACAGCATGGATGAATGCCATTGGATTGATCATCACTGCCCTACCAGAGCCGTATTGGATTGTCCTTCACGATCGAATAGTGAGTGTTATCAGCAGTCCCAGCTTGACGTCTGAGACAGAGTGGGTCGGCTATCCTTTCCGGCTCTTCGATTTCACCGCTTGCCATCAGTCCTACTCTGAGATGAGCTGTAGCTACACGTTAGCTCTGGCACATGCAGTGTGGCACCACTCCAGCATCGGGCAGCTTTCTCTCATTCCCAAATTTCTCACTGAAGTACTTCTTCCTATAGTGAAGACTGAGTTCCAGTTGCTTTATGTGTACCACCTTGTGGGACCATTTTTACAAAGGTTTCAACAAGAGAGAACTCGATGTATGATAGAGATTGGTGTGGCGTTTTATGACATGTTGCTGAACGTAGACCAGTGTAGCACCCACTTAAACTACATGGATCCCATCTGTGACTTCCTGTATCATATGAAGTATATGTTTACTGGTGACAGTGTAAAAGAACAAGTAGAAAAGATTATCTGTAATTTAAAACCGGCTTTAAAACTCCGTCTTCGATTCATCACTCACATTAGCAAGATGGAACCGGCTGCCGTGCCTCCGCAAGCCGTCAGCAGTGGGTCTCCAGCACCTCAGTCTACTCAGGTGCCAGGGTCTCTGCCGGTGACTCAGTGAAGTCAGAGTGTGCTGTGCTGAAAGTGGACTTGAGTCTATTAGATCTGAACCTGACAGTACTACATTGTGGCGGAGGAGAGGCAGCGGTGTTCAGATTGTTTTATTTTGATTCATGTGGTGGATCTGTTGACTTCCAACTCCTGTCTTCCCATTGCTTTGTCTCTAAGAGATCACGTAAACTACACATTGCTCGTATCCACAGCAAGGTATTAGAGCTGCCTAGGATATGGACATATCTGATCAAATGGCCTTTACCAGGCACTCTCAATCTTTCCTGTTTTGACCATTGTTTTTGTTTTTATTTTTTAGTATTAATAACTTATTCAGTCTTCAAATCCAGTTTTAAAGGCACCACACATGTAAAATAGTTATTACAAATTCTTTTATACATAAATCTCTCTTGGTATATCTTTGCAACAAGAGATTTTTGTCAAGTAAAGGTCTCTAGATTTCATTGCATTAAAGGAGCAAACACAATTTCATATTCTTTTTTAAATGGCTTAAACTTTTTATCATAGATTTCCAAGTAAACAGGCTAATATTTCTATTGAGATAGATTGGCAAGTTTTTGCCTTTGCTGTGGACTTGAACTTACTATATGAAATGAGTTGGAAGCCATGTAAGAAAATAACATAACTTAAGAAACTCAATTTTCTTAATACCTGTTTTTAAAAATAAATCAGTTACTTTTCCAGGTTGACACACTTACTTGGCAGATGATGTGATTCTTTGAATTTTTATAGTCTTAAATTTTTTAAGTATTTATATTTTTAAATATCATATACATTTTGGTTCTTTAGAGTTTATTAGATTTTGAGAGACACACTGTTATTTTGGGGGGGTGGCATTAAGATTGTAAAAGACTTGGAAAATAATTAGTAAAATCTGTTGAATGAA EMBV3_33215 GCATGAAGTCTCAGCTTTGGGCTAGAGGTTAGATTCCACAGATACCAGCAATGGTCAAAC Gene GeneID:537455|NTN4:NM_001102203:7_cdna Constitutive 0 NULL GeneID:537455 5 GENE NTN4 MGC160042 netrin 4 EMBV3_05925 CCTTTGGGAGAACCTATTCACTCCCTTCTTATTGCAGTGGTTCCTATCTCAGGGATACTG Gene GeneID:511255|OSBPL9:NM_001075505:43_cdna Constitutive 2 NULL GeneID:511255 3 GENE OSBPL9 MGC140169 oxysterol binding protein-like 9 EMBV3_10235 AAACAGCAGCAGTGGTCAGGGAACCGAAGGAGGCTGGGAAGCTAAAGCAACATTCACCCA Gene GeneID:541169|NOP2:NM_001102257:64_cdna Constitutive 0 NULL GeneID:541169 5 GENE NOP2 MGC165889 NOL1 NOP2 nucleolar protein homolog (yeast) EMBV3_40601 TTTTAACCTCAGAACCCTTCCTCTTAGCAAAACTGATGTTCTACGCCAGTCCAACCTGGT Gene GeneID:507139|GCA:XM_002685376:298_cdna UTR3_Alt 3 NULL GeneID:507139 2 GENE GCA NULL grancalcin, EF-hand calcium binding protein EMBV3_28515 CCCCGAGGAGCTCAACCTCATATTCACCTTCCCGCTCATCTACAGCATCTTCCAGATCAT Gene GeneID:525823|SLC10A2:XM_002691982:77_cdna Constitutive 0 NULL GeneID:525823 12 GENE SLC10A2 NULL solute carrier family 10 (sodium/bile acid cotransporter family), member 2 EMBV3_01993 ACGAGTTCCAGAAGAAGTGGCACGAGGAGGTGGAGGCGCTCAAGGAGGGCGGCGGCAGCC Variant GeneID:281631|APOA1:NM_174242:20_cdna 442^639 1 EMBV3_12200 GeneID:281631 15 GENE APOA1 NULL apolipoprotein A-I EMBV3_04652 AGAGCACTTGAACTGGGATTAGTCGCTGGATTGGGAGACCTTGAACTTGCCCATCCGTCA Gene GeneID:516137|TDGF1:XM_002695583:116_cdna Constitutive 0 NULL GeneID:516137 19 GENE TDGF1 NULL teratocarcinoma-derived growth factor 1 EMBV3_02840 ACAGCTCAGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACC Gene GeneID:523780|HS2ST1:XM_002686305:196_cdna Constitutive 0 NULL GeneID:523780 3 GENE HS2ST1 NULL heparan sulfate 2-O-sulfotransferase 1 EMBV3_01978 CCTCCAGAAGCGAGCATTTCAGGGAAAAGGCCCTGCTCTACTACTGTGAAGCCCTAACAA Gene GeneID:539635|FAM65B:NM_001035425:128_cdna Constitutive 0 NULL GeneID:539635 23 GENE FAM65B MGC128480 family with sequence similarity 65, member B EMBV3_32887 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26895 AGTGACCTGAACGCTGACACCCAGCCTTTCGCCCAGCCTCTCGAGGAGGTGATGCACACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28338 CAGCTGTTGAAAGGGAATAGGGATACAAGCAACCCTGCCTTGGCACACACATGGAAAAGA Gene BVT0102_404481 - 1 EMBV3_33266 GK000021.2:54751241-55015474 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38362 TAGGCCCTCCCGGTTCCTGCCTGAGGACCAGTTGTAAATGCTACCGCTTCCTACCAATAA Gene GeneID:100295338|LOC100295338:XM_002685288:89_cdna Constitutive 0 NULL GeneID:100295338 2 GENE LOC100295338 NULL similar to homeo box D9 EMBV3_29873 CAGACCTCAAATCAGGGGCATAGATTGGGTCCAGCTTTGCTTCAGTGTCTGGGAATGTCT Gene GeneID:404098|SND1:NM_205784:146_cdna Constitutive 1 NULL GeneID:404098 4 GENE SND1 MGC129117 staphylococcal nuclease and tudor domain containing 1 EMBV3_02695 ATTTCTGATCTTCTCAACGACCTGTTTTGCTGTGGTTTCCTCGTGGGGGCCGCGGTCTTT Gene GeneID:520499|CMTM2:NM_001075807:279_cdna Constitutive 0 NULL GeneID:520499 18 GENE CMTM2 NULL CKLF-like MARVEL transmembrane domain containing 2 EMBV3_39253 AGCAGTGCAAGCAGGACTTGATCAGGGAGCTGGAGACGCTGGATCCTACCTCAGAGCCCA Gene GeneID:100300303|ZBED4:XM_002687994:117_cdna Constitutive 0 NULL GeneID:100300303 5 GENE ZBED4 NULL zinc finger, BED-type containing 4 EMBV3_06258 CAAAAGGCTCCTCAGCTAGTCTCCGAACGATGTTGCATAAATGTGGAGGGAAGCACATGG Gene BVV0102_044478 + 0 NULL GK000030.2:22455774-22539301 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03244 GCTGGCTAGCTTGGAGAGACAGATAAGGGACCTGCGATCAGAACTGGATCACGTCAAAAA Gene GeneID:497014|MBL-A:NM_001010994:269_cdna Constitutive 0 NULL GeneID:497014 28 GENE MBL-A MBLA MGC133959 mannose binding lectin, liver (A) EMBV3_18197 CCTCCCTCTGCTACGGAAAATTCAGCTCTACGACCCCATTCTCCAGATCCACAAGGACTT Gene GeneID:512242|LBP:NM_001038674:997_cdna Constitutive 1 NULL GeneID:512242 13 GENE LBP MGC134541 lipopolysaccharide binding protein EMBV3_38086 AGCATTACCGAATCTTCCGTCTGCCAAACAACTGGTATTACATTTCTCCGAGGCTCACCT Gene GeneID:513589|SLA:NM_001024533:23_cdna UTR3_Alt 2 NULL GeneID:513589 14 GENE SLA NULL Src-like-adaptor EMBV3_03629 TGTAACGGGCCCTCTCTTTGGTTCTGCCCACCTGAGAAATGGGAGAGATACTGGGAGAAA Gene GeneID:614494|MOGAT2:NM_001099136:56_cdna Constitutive 0 NULL GeneID:614494 15 GENE MOGAT2 MGC159930 monoacylglycerol O-acyltransferase 2 EMBV3_24943 CCATTTGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCAC Gene GeneID:783264|LOC783264:XM_002692377:274_cdna Constitutive 0 NULL GeneID:783264 13 GENE LOC783264 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_11578 TCAAGGCTACCAGGGCAGCTTCCACTCCATCCAGAATTGCTTCCCCTATGGTGACTGCTA Gene GeneID:541222|GLIS1:XM_002686397:251_cdna Constitutive 0 NULL GeneID:541222 3 GENE GLIS1 NULL GLIS family zinc finger 1 EMBV3_19140 GATCCAGGGTCTATTGCAAGCAGTTTCACCACCATCTAAGCCACCAGGAATGCCTAAAAT Gene BVV0101_047181 + 1 EMBV3_26860 GK000021.2:6239277-6262123 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33708 GGCATCACGGAAGTGAAAGCGAGCCAAGAGTAAGACAGAAACCAGTACAAATAAATCCCC Gene BVT0102_168057 + 0 NULL GK000023.2:24702831-24803729 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134437 TCONS_00134436 1 XLOC_081404 NonCoding TCONS_00134437 XLOC_081404 NonCoding NonCoding - 23:24789681-24798377 - TSS100214 2471 2 TCONS_00134437_1 84 0.340752731687576 2 0.716043703277746 0.000162761728407318 0.000166220456335442 0.000441913497850152 0.000322621256241353 0.000305690375596223 2.35405042434494e-05 0.000292638573595651 5.25841114383367e-10 0.000379975055976981 2.05347825849559e-09 1.11170292973435e-05 1.68026955166368e-09 1.42364518796821e-09 6.25620915188091e-10 0.000381210907259354 0.000203045364978388 0.000147814710023566 0 0.000734987794594694 0.000303090542072679 0.000344605806559988 3.72766085178199e-09 3.40319789660697e-05 7.07382800933407e-09 8.95079517653726e-05 0.000510371457089925 0.000112513940488465 4.63098641543175e-09 6.6795063905877e-05 3.99336371636782e-05 XR_232761.1 LOC786451 PREDICTED: Bos taurus F-box only protein 16-like (LOC786451), 4e-99 367 88.85 0.115337919870498 0 noncoding 0 0 0 0 -0.404454624388363 0.18278823011033 0.00531014918331998 0.920927230265995 AGTGGTCGACACGCGTCAGAGGGTTCCCCGGACGCGTCGGAGGGTTCCCGAGGACGGTGAAGCCGGCGGAGGTTACCTCCGCCAGCCGACGCCTCAACCGGGCCTTAGCCTCAGGCATCACGGAAGTGAAAGCGAGCCAAGAGTAAGACAGAAACCAGTACAAATAAATCCCCAAGTCAAAACAGCTACAGTCGAATTTAAGGAAAGCAAAGGTGTGCTGACTTTTAAAGGATGTTTGTGGTTTCAGAGAAATCCCAGGACATACAGAGAAACTTGAAATTTCCAAGGATGTGAACTGCAAGACAACCATTGCTCATCAGATCTTGTCCTTGACATTATGGACAAGCTTCTTTCAAAGAAAGCTCTTTACCCATGGGGATAAGGGAGTTGATGGATATAAGAATCATTTCTGGACTGTCACACACAGGCCATGCAACCTCACCAAATAAATAGTTCTTTGTATAAAGAAAAAAAGAACTATTGTCATGATGAGAAGAGGACAGGAAAAGGCTGAGATGTCCCAAACAGAATTACAACTCATTCATTTGAATGGAATATTTGAAAAATAAAATAGGGGGATTTAAGCACGGTCCATGGGGATTATAAATTATGGGCAATGTTTTCCTTATTTAGAATGTTGAGGGAGGAAGAACTTTTGTATAGTCAGAGTCACGAGTTTCCAGTTACTAGAGATTTTCAAGCAGGCCCTGGACCACCACATAGCAGGTGTTGGAGACATGAGTCAGGCAGTAGAAAGGTATACGAGGTGAACTCTGAGAGCCTATGCAGTCCTGGTGTCTCTGGCAACATCTCCTTTCTCCAAGGGAAGATGCAGAATTATCCTGGAAAGGAAGAGTATAGGCAGGACTGATCCCAGGAAATTTAGGCAAAGCACCAAGAAGAAGCCAGATAACTGGAGGAGAGCCTTCTCTAGATTAAGTTGGATTTATGGAGCTGGAAAAGACTTTAGGGGGTGGCTGTCTTGCTCTTGATAAGGAAATGGAGAAACTGTATCAGTCAGATAGGCTAGACTATGATGCATTAATAAACTGAAATCTCAGTGGCTTAACAGAAGAAAAGTTGATTGCTCCCTTGGGCAAACTCCTTTACGGATGTTTCTAATCAGAAACATTCTCCTCCAAGTGATGACTGAGTGATACAGGTTCCTTCCATCTTGTTTCATGTCCCTTCAACACATGGCCTGAAAAGTCCATGGGAAAGGGAAGAGAATTCAGGAAAGGCACCTGACTACTTTAGACATCCAAGCCCTGAGTATTTCATGAATCACTTCCACTCAGATCCTGTAGGCAGAATGGATCCTGCAGCCAACCCAATTGCAAAGGAGGCTGGGAAAGAGGGGACCACACTGATATCGGTCACACACCTGTAGTTTTTTCCCACAAGAAGCCAAGATGCAGAGGGATGCAATGGTTTCATTATGATCATTGTGTTAATGTTGACAGAACTAAGATCAGATTCTAGATATGATGATTTATCAGGTTAAGTGTAGTATATGGTGAAGACTTCCATGGCTGGATTCTGGGCATCCCACTTGGCAGCTAGAACCTCAAAAAAACAAAACTTTTATAGTTCCTCATGCCCACTAGACCTTCTATCTTTGCTCCTGAAGCCCCTTATTTAGGTGTGAATACCTTCTGCTTCTTTACCTACCTTCTCTTTGCCTCCTTATTCTTTAAGACTTAAGCATCTGTGCTTAATGCCCTCCTCTCCAGACTGAGTTAGGTGTCCCATGCATCCATGTTATCCTGTCCTGACATCAACCCTGAATATTCACTGGAAGGACTGGTGCTGAAGCTGAAGCGCCAATATTGTGGCCACCTGATATGAAGAGCCGACTCATCGGAAAAGACCCTGATGTTGGGAAAGATTGAGGGCAGGAGAAGAAGGGGGCGACAGAGGATGAGATGGTTGGATGGCAGCACCAACTCAATGGACATGAATTTGAGCAAACTCCAGGAGATAGTGAAGGACAGGGAAGCCCGGCGTGCTGCAGTTCATGGCGTTGCAAAGAGTTGGACACAACTTAGTGACTGAACAAAAACAAAAAAAAAAGTCATAGGTGGTAAAGGTTATGTCATTATCCATTTTTTTATTCTATTTCCAACCCTAGATTGTGAGCTTCTTGTAGACAAATGACATTATTAAAATTTTTTGCATTGTAATAATTAAAAATTTTTTGACATTCAGCAAGTCTGACTTTATGTATACAGTTTATGGAGTTTGACAATTATATATATTTTTTGAGTTAAGATTTTCCTGGTTCTTGATATGCTGAATAATCTGAATAATGGTATCCTGGACATTTTGAAATGATATTATAAGACTCTGAGCCTTGTTTGAATCCTGTAAAATGTTGCCATTTCTGTTTTAGCAGGCAATCAACTTAGCTGGTTTCAGTCTGCAAGGTCTGACCAACTTGCTGTGGATGGTGTTTTCAATATTGGTTCTGT TCONS_00132764 r 5' 11774 TCONS_00132764 r 5' 5337 EMBV3_04259 GCGCTGAAGGGGGCTGGACAGACGGTGACGATTATAGCACAATATCAACCTGAAGATTAC Gene GeneID:100336924|LOC100336924:XM_002699050:110_cdna Constitutive 0 NULL GeneID:100336924 29 GENE LOC100336924 NULL chapsyn-110-like EMBV3_43307 TGGAAGAGGGAAAGACCCTAAACCAGAGCAAAGTACACTTCCAGCTCTTAACCAGGCTCC Gene GeneID:540197|NSD1:XM_002689032:93_cdna Constitutive 0 NULL GeneID:540197 7 GENE NSD1 NULL nuclear receptor binding SET domain protein 1 EMBV3_37937 CATGTCAAGAAGATGAGGAGCCATGCAACAGGATTCAGAGATCCCAGCAGCAAAGCCTAC Gene GeneID:783027|LOC783027:XM_002687779:32_cdna Constitutive 0 NULL GeneID:783027 5 GENE LOC783027 NULL bitter taste receptor EMBV3_00246 CTGGCAGAGGTGAGGGATATGGTGCCACTTGGCTCTGGCCATGGTTTGTGTAAACATGAA Gene BVV0102_227832 + 0 NULL GK000026.2:12931317-13062903 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14030 TACAGTGCTCTGAGGGACACACTCTGTGAACGCCTGTGATGTGTGGGGAAATCAGAAGCT Gene BVV0102_397490 - 0 NULL GK000014.2:18389174-19099603 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01873 CCCGAAGGCTCTCCGTCGAAGGCAACATTGGTTTGTTTAAAGAGACTACAGCGGAGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18854 CTGGCTATTGGAAGGTGACAATGACCAATTGAGAGCCATCATTGAAGCTAATCCTCTTAC Gene BVV0102_203936 - 1 EMBV3_27481 GK000009.2:56340430-57266909 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11065 CTGGGGCCTGTGGTTTTGCATTCCAGGCAGGGGCTGAAGCTCTTCTGTGCTATGAAGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33954 GAGCTTACACACCATAATGTTCCCACTACAGAGTTAAGTTTGCATTCATTCATTCACTCC Gene BVV0102_107992 - 1 EMBV3_41316 GK000012.2:45221284-46379973 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10643 GGTTATGAAGATGCTGAAGAGCTTTGGCCAGGATGACATTGAGATGAAGGTCGTGAGCCT Gene GeneID:533687|RHPN2:NM_001083470:676_cdna UTR3_Alt 1 NULL GeneID:533687 18 GENE RHPN2 MGC137880 rhophilin, Rho GTPase binding protein 2 EMBV3_23314 ATGCCACGGCCTTCCAGGGCACACCTCTAGCCCGGACAACGTGGCCCTCCAGGTGGCCAA Variant GeneID:282393|UQCRC1:NM_174629:58_cdna 595^895 1 EMBV3_03684 GeneID:282393 22 GENE UQCRC1 NULL UQCRC1 protein EMBV3_31889 TCGGTACAGATCTGACGACACTTTGGACAGAAATGTGTCCACGTTTCAACCACCAGAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10524 TTCATCTTGGGGCGACTCTACAACTTCCAGCCCTTCCTCACCCGCACCGAAGTTTACAAA Gene GeneID:532489|SDR42E1:NM_001080292:53_cdna Constitutive 0 NULL GeneID:532489 18 GENE SDR42E1 HSPC105 MGC134405 short chain dehydrogenase/reductase family 42E, member 1 EMBV3_25019 CTAGCTTTTGGAGTGCCAAGGTGAATGTGAGCGCAGAGATCATGGATAGCTCAGGGCAGT Gene GeneID:513598|SMG5:NM_001083679:132_cdna Constitutive 0 NULL GeneID:513598 3 GENE SMG5 MGC155268 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) EMBV3_27225 AAGCCTCATTTGACCTTCATGAAATTGTCCAGGTTACCATGGCTCCGGAAGAAGGGAGTG Gene GeneID:613606|AKAP7:NM_001102266:7_cdna UTR3_Alt 2 NULL GeneID:613606 9 GENE AKAP7 MGC139521 A kinase (PRKA) anchor protein 7 EMBV3_27397 AAGCTCCGTCCCGCCTCCGTTTGCACATGACGTCCCGCATCGGACCCGCTTTTGTATTTT Gene GeneID:521416|BCAS3:XM_002695612:29_cdna Constitutive 0 NULL GeneID:521416 19 GENE BCAS3 NULL breast carcinoma amplified sequence 3 EMBV3_37010 CCACAAACCTAGTATCCCTCTTTTCTCGTTACGTTGACCGACAGAAACTGAACTTGCTGG Gene GeneID:537453|PATL1:XM_002693813:60_cdna UTR3_Alt 2 NULL GeneID:537453 15 GENE PATL1 FLJ36874 protein associated with topoisomerase II homolog 1 (yeast) EMBV3_25485 GGTAATTTCTGCCCACCCTGAGCATCTTCCTTTGGTATTATTTCTACAGTATTTGACAGC Gene BVT0102_079798 + 0 NULL GK000001.2:35759262-36656608 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000347 TCONS_00000345 TCONS_00000346 1 XLOC_000094 Coding TCONS_00000347 XLOC_000094 Coding Coding C1H3orf38 1:35752974-35766468 j TSS175 8869 1 TCONS_00000347_2 390 0.182094937422483 3 0.342918550359446 0.000382729805894378 0.00033899997700587 0.000172311810437898 0.000186611093402864 0.000359792817304175 0.000135952056934509 0.000341236451892413 0.000246394379485103 0.000540566121129429 0.000109469507072282 5.08789984916982e-05 4.92231685566001e-05 4.48462369401107e-05 0.000177899622572657 0.000148868935687475 0.00109440519991611 0.000342696786822472 0.00101421748620163 0.000116518221985555 2.74252579642178e-11 7.25764842553666e-05 0.000420230928479459 0.000345169262621735 0.000490678545572928 0.000357541226016989 0.000253824603755615 0.000354031572723426 5.67567652906014e-05 5.99423231651738e-05 0.00013379777892384 XM_005201179.1 C1H3orf38 PREDICTED: Bos taurus chromosome 1 open reading frame, human C3orf38 (C1H3orf38), transcript variant X1, mRNA. 0.0 4855 100.00 0.303416394181982 XM_005264745.1 C3orf38 PREDICTED: Homo sapiens chromosome 3 open reading frame 38 (C3orf38), transcript variant X1, mRNA. 0.0 2055 77.99 0.282669974066975 TCONS_00000347_2 sp|Q0VCL9|CC038_BOVIN CC038_BOVIN Uncharacterized protein C3orf38 homolog; 0.0 643 99.36 0.797435897435897 1 coding 0 0 0 0 -2.23019456449808 0.0204904570073153 -0.546086218865648 0.001539850005875 CGGGGGCCGACGCCAGCTTTCCACGCACCTGTACTGCGCAGGCCTCCCAGGAGCTCTTTTGGAGGCGTGACTCCTGAGGAATTGAGGGTTTCGTTTTATCTTGTGGAAGGCCGGCGTTCCGGTGTAAACGCGGAGCTTCCCTAAAGTGAGATGCGAGATACTTCTCTCAGTTCCCAGCAGCCCGGAACCACCGATCGGAGCACCGAGTTTCCTGAGTGCCCTCATTTACTACGACTTCCGCCCACGGGTCTGGAATACCCGAGGCTCTTTAGCGGTGAACGGCCGGAAAGGCACTTCCGGTATCTGTTGCCAAGGCGCCGGCCCGCTGGGCCTAAGGAAGCGACATTGTTGGCGGCGTCCTCTCCCCCCATTCTGGGGGTCGAGATGACGGGGCTCAGCTACACGGAGATGGAGGGCTGTCGTAACCTGCTCAGCCTATTGGACAACGATGAGATCATGGCCCTCTGCGACACCATCACCAACCGTCTGGTGCAGCCTGAGGACCGCCAAGATGCCATTCGTGCAATATTAGTCTACAGTCAAAGTGTAGAAGAACTTTTGAGGCGAAGAAAAGTCCACCGAGAAATCATATTTAAGTACTTGGCAACACAGGGTGTTATTATACCTCCAGCTACTGAAAAACACAATCTTATTCAGCATGCAAAGGATTACTGGAAAAAGCAGTTACAACCAAAATTGAAGGAAACACCAGAGCCAGTTAAGACAGAGGACATTAGACTCTCTGAACAGGAGAAAGAAGAAAAAAACGCCGAAAAGGTTGATTTTCGTCGATTAGGTGAAGAATTCTGTCAGTGGTTCTTTGAACTTCTGAATTCTCAGAATCCTCTTCTGGGACCACCTCAAGATGAATGGGGGCCACAGCACTTCTGGCACGATGTCAAGCTTAGGTTTTATTACAACACATCTGAACAAAATGTGATAGACTACCATGGAGCAGAAATTGTGAGCCTTCGTCTGCTGTCACTAGTGAAAGAGGAGTATCTTTTTCTCAGTCCCAACCTAGATTCCCATGGACTAAAATATGCTGCTTCTCCCCATGGTCTTGTTATGGTTGGAGTTGCTGGGACTGTGCACCGAGGAAACACTTGTTTGGGCATTTTTGAACAAATTTTTGGACTCATCCGCTGCCCTTTCGTGGAGAATACTTGGAAAATCAAATTTATCAACCTGAGAATTATAGGAGAGAGTTCCCTTGCTCCTGGAAGATTAATGAAACCGGCTATTACATTTGAACCAAGTGACCTAGAAGCCTTTTATAATGTAAACACTTTATGTGGTCCCGTGAAGTACAACTCCATGTAAGGCAGGCACTGGACAGTGGGATTGGAGACCAAGATTCATCTAGTGGAAGTTAGGCACTGTTGACCAAAAGAGAACTAATTTTACCTAGCCCTTAAAGCACTGAGTACACTGTCAGTCTGAAAAAATCTTCTATACAGAAATTCATCCAAATACTACATCAGCAATGTCTAAGTGATTTCATGTTGGGGGGTTGACAAATTTTAGTTGAAATGTCTTTCTTGACTACAAGCTAACATAGTATGTGAACACTTGCCTCTTTTCTACTTGAGTTGCAGCAAATATTCTGAAAATTTCACAGAATTCGTCAAATAAATCCCACTTGAGATGTTGTAACTAACAATGTGCCTTCGAAACCAGTTAATATTGTCACTTAGTGGGTATTCTGCTGCTATCTGTACTTTTCATGTGGGGAAAAAATTAATAGTGTTCAAGGCTTCCCCTTTAAGTTTTTCAGTTACTTTTGTCTAAATCTAAGTAATTTTACAAATGCATCTTATGACAGTATTGCTTTAAAAAGAAGTACATATATTAGAGATGTTTAAAGTCAGGGGTTATTTTAGAAATTTGAATGACATTCTCATAGTAAAAGTACAGAAATTTAGCTGGTGGAGAAAAATTTAATTTGCTTTTTAAAATATTTAACGAACGTTTTTCAGAGTTATCTATTGTCCAAGCTAAATATCTTATAATATGCAACGTTTTGTGAAGTATTTTGGGTAATAAGTGCTGTTCTTAAAACAGAATTTTTTCTTTAAGCTTTCAGCTAACAGTTTTATAGAGCATTTATTATACTGTTGAAATTTTTTTAAAGGTATATCCAGTTTCTAATTTAAATGAATTTTTTCTCTTGAATGATCTTAGGTGACCAATACCCCACATTAAACATATAGTGAAATATATTCCCACATCATAAAATTATTAGGATTTTTTCACTTCTAATTTGTTTTACTGGATTTGAGTTACAAGATTAGATTGCCAGATTACACAGTTGCTTTCAAGTTAAAATTCCTTATCACCCAGCAGCTGCTTGCTGAATCTGAATTTATTTAATAATTTTAATTTGCAGAAATGTCATTTGGAAAAAAATTCAGCTGGGAAATGTTGTGGTGAGGTACTTGTACATATTAATTTTTTAACTTTAACTCAGCTCATGATCATCTAGGGTGACTTACAAAATTTTGGAAACAGGAGGAAAAGAATGATCTTTGTAATTTTTTTTTTAGCGCCATGCCTCTTAGGAAGAGTACAAATTCATACATCCCCAAATAAGAACTTAATAAAGGAGGGAAATCCCTTTAGTCTGCTGTAAGAATAGTGCTTTGTTTAGGTTTTTTTTTTTGTACTTTAAGTTTGAAGTATCATTTTAACATGTAATTGATAGATATCCTTAGTAAAGGATAAAATTTAAAATTATTCACGTATTCTTTGTTCTATTGCTGTCGAATACTGTAGAAATAATACCAAAGGAAGATGCTCAGGATGGGCAGAAATTACCTGTAGGTATGTTCAGTATTGAATTTTTGAATGTGTAATGTTCAAGTTAGGTTGCAATCTGCATGTCCCTTCAGTCACCCTTTAAAAATGTGAAATCTTTCTGATACACTAAATGAGAATTCCCCTGGAGAAGGAAATGGTAACTCCAGTATTCTTGCCTGGAACATCCCATGGACAAACAGGGCTACTGTTCATGGAGTCACACAGAATTGGACACAACTGAGTGACTAAGCATAATTAGAGCTATATTTTATTTCCTTTGAATCCCCACAGCTGGCTACACAGTGGGACCTAATGTCCAAGTGAATGGGTGAATGAATGAGTAAAAGACATTTAACCTACTGTATAAAAGACTTTTTTTGCATCTAGATTTTGTCTTTGGTTCTAGTCATTAGTGGTGGTCTTGGGGTTATATAATCTGTTGGAATTTAATATGTGGATGCACAAACTTTTAGGCCCCAAATTAGGATAAAATTTTAACTTCCCATTAAAATTTACTGACATAAAGGTCAGAGTAGGATATACTGGAGGGCCCTAAGATGGCTTGGAGAAGAAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATTCCATGAGCAGAGGAGCCTGTCTAGCTACAGTCCATGGGGTCGCAAGAGTTGGACATGACTTAGTGACTAAACCACCACCACCAGCAAGATGCCTAGAAACAGTTTTGGGGAAGTGTGTATTTCTGTTCTGAGAAAGATCTAGAGGAATTGAAATTTGTTCATGACACTTAAAGCTTGGCCAGGCCTTTGAGAACATCTAAAAGTGCACTTAATTCATAGTCATTCAGTGGTCAAACCAGGGGATACCTGGTCTGTTTACTGGAGGCTGATTTGCTGTAGCTGACAGTGACACATCAATATCCTTTTTTGTTAAAATGAAAACGTATTTGTTGTATTTGGATGTTTTACTAGTATCTAAAATACCAAAAAACATATTTCATGTGTCTTACTAAAATATCAAGTAATAGAAAAAACCCTCTCTAGTTTTATTAAATCAACTTGAAAATGGCAAACACAGGAAAACATTCTTGGGCTATCAGAAAGGCAACATTTTCATGCCAAAGGAAGACTAGTTAGTTAAGCCCAGTTAGTGTAGTAGCACTCCAGAAAAGGACTGAAAGAATAATGGTATAACTAAATAAAAAAGATAATCAGAAACATTGGATTTTAGCAAAAAGCTCTTATGGCTTAAAAAGTCATAAAAATGAGTGAAAACCGTTTCTCAGCATCTATTTTAGATGCCCCCCCCTTTTTTGTTTTCTAATTTTATTTTATTTTTAAACTACATAATTGTATTAGTTTTGCCAAATATCAAAATGAATCCGCCACAGGTATACATGTGTTCCCCATCCCGAACCCTCCTCCCTCCTCCCTCCCCATACCATCCCTCTGGGCCGTCCCAGTGCACCAGCCCCAAGCATCCAGCATTGTGCATCGAACCTGGACTGGCAACTCGTTTCCTACATGATATTTTACATGTTTCATTGCCATTCTCCCAAATCTTCCCACCCTCTCCCTCTCCCACAGAACCCATAAGACTGTTCTATACATCAGTGTCTCTTTTGCTGTCTCGTACACCGGGTTATTGTTACCATCTTTCTAAATACCATATATATGCGTTAGTATACTGTATTTATGTTTTTCCTTCTGGCTTACTTCACTCTGTATAATAGGCTCCAGTTTCATCCACCTCATGTGGTACATACACACAATGGAGTATTACTCAGCCATTAAAAAGAATAGATGCCCCTTTTTAAATTTGGGTTGTGGGGGACCTTTTAAAAAAAGGGAGCTATATTCTCTATAAAAAATATGTTTGCATATGTTGGTGTTCAGTCACTAATTCGTGTCCAACTCTTTGCAATCCCGTGGACTGTTACAGGTTCCTCTGTCCTCCGCTATTTCCTGGAGTTTGTTCAAATTCATGTTCATGGAATAGGTGATAACTATCTCATCCTCTGCAAATATTATTATTATTTTTGCATAATTCAGGGAATTCTTGGACTTGCCTAAAGCACATCTGTTAGTCCTGTAGGGATCCTTGTACTTGATATCCAAATCCTGCCATAATAATTTATTTCCTGCAGACTTAAATTATTTTTAGAAGATTTTGTGCTCTTACCAAAGTCCTTAAGCTAAAAGGCTAAATCTTATTAAGAATAATCTCTAGAAAGTCTGTTGTTTATGATAGTTAACTTGTGAGTTTTTCTTTTTCAGTAGGTGTTAGATGTTATGACAAAACCTACTAAAATAGTATCAAGTGAAACAAAAATATTAATGCAGGATTCATTTTATTTTGACAAGATAAGTTTAATGGCCATGCTTTGGAGAAAGTGATGAAATGTGTATCTAGCCAGTTTGAATGCACGTAGCACAGCTGTGGTGCTGGAAAATGAGACTTTCTACATCTGGGTTTATATGCATGTATTTATTGAACATCTGCAATCTGTAAGTCAGTGAGTCAAGCATACGAGAAAAGAATACATCAATAGATTGATTTACCTAAACTTATTTTGAATTCACCTCTCTGGTTTTAGATGTCTTAAGGTGAGAACTGCATTAGGCCCTTTGCTAGAGTTGGAAGGAAAATATTTGTGCGTTGTCGAAGAGTGCACTAAATCCTTTCAACTTTATTTTTCCTAGTTTGAACCCTTCCTATAGTCTTTCAGTAAAGTGTTGAGTGATATTTACTGTGAATTATAATGTGCCCCACATTATTAAGCCAGAAACTCCAGAGTTCCTTGTGTATAGTCATGAATTGTTACTGGAATCCCTGGCCTAATCTCATTTACTTTTTCAGTGAGTCACTTAGTGAGGGTTCTTTGGTTGGCAGACTTCATCTTAAGTTTTAAAACAACTTAAATCTCAAGTATGAAATTAGTAATATTTGAGTTAATGAGTTTAAGCATTGAAGGAATCTCTTGCTGTTCACTGCCAGCTGTGTTATTTATCTGATGGGATGTTTTCTGAACTAAGCATCATAACTACTTACAGCCTTTTTGCTTGAAGCATTTCATAAACTTGAATTAATCTTTTCTATTTCTGATCTTGTACTAATTGTTCTCAAGTTGTTAAAGGTACTTTTGTCTCCCTAAATAGTTCCTGGAATTGATGATTCTTTCTTATTTCACAATCATTCCCACCTGTGCCTTGCACAATATAAATAATAGCTAAATTGGGGTATTTATTATATGGCAGTTACTTTTCTGTGCATATTGTGTGTTTTAATTCATTTAATCCTGTGGACAGCTATCACTTATTGGAAAATAGGGTTGAGTAATTTCCCGAGCTTTCAGAGCTGATGGTAGAGCCTAGGGTTAAACCCAAATTTTAGAGTTTGAGAGCCAGTGTGTGGTAACTACTATACATAGTGCCTTGTATCTACAGTAGGTTGTGGGTTTTGTGTTTTTGGCTGCATTGAGAAGCATGTGGGATCTTATTAATAGTTCCCGACCAGGGATCGAACCTCTGCTCATTGCAGTGGTAGCATGGGGTCTTAACCACTAGACCACCAGCTAAGTCCCTAAAGTAGTTTTTGGTGAATCTTTTTTGACCAACTGTCATTTGCTGTCACATTTCCAAAGCAAACATGCCTTTGAATTGTTCACCTGGATTAGGCAGGAGTGTCAACACATACTGTTTCCTCTTGTAATTATATTATACCTCTTGAGTTGCTTGTTTAGTTGTATAAAACCACCTGGAAGAAAGATAAAAGAATCTTAATGTATGCCAGTGTTACTTATGAAGAAGGATAAATTGGATAATTGAGAAATTAAAATAAAATTTTAAAAATGTAAGAATTCATATCAGATTTCTTGAACTCCCTGTGTCACAAGCTCTGGTTCTCTTTCCTTCCTGTTTGTGACACCCTTGTGTTTTTGGCCTTAGAGATAGTCTTTGTTTCATACGTGCAGTTTCTTGCCGTGTCTGGATGTAGCATATCTATAGTACTGTTTTCTGTTTTAGCTGCTGAAATTAGACCCTCTTTACCTAACCCTTGTTATGTAATAATTTATTTCTTTGCTTTAATCTTTCTTGCATATTTGTGACATTAAAATTTCCTTAAAGTACTACATCTTTCATCATATTTTCCACATTCAGATATTTCACTGGTGTTACATTGCCTACAAAATAAAATCCGGATACCACAGTCTTCTTTTTATCACTGTCTAGCTTTGATTCCATTCATTTGGACACACTGTTTGGTCCAGCAGACATCTATAGCTATGTAGTCTTTGTATTCATCCTGTGCTTACTTAGCTCTTTGCTTTTACTGGCAAGTATCCAAAGTTGTAGAATTTAATTTTTTTGTTGCTTCAGACAGCCTTATTGTAGAAAGAAAAGGACTCCAATAGAAATGGAGTTTAAAAACTGAAAATTTCTCCGTAAGTCAAACTTTATTTTCTCTTGAGTTTTGTGTACCTTGTCTTATCACGAATAATCTTTCCCCAGCTTTATGTATGGCTGCTTTTTCATCTTTGAGGATTTGGCTTAAATATTTTCTCAAAAGTGGACCCTCTTTATCATATTGGTGTTTATCAGAGCACTTTGTTTCAGTTTTAGCACTTTAGATATTGTTGTTGGTTGAATTTCCCGTACTAAGATTTTAAGCTGAAAGCAGGGATTGTTTTACTTTTCCATTGTATTTCCATTGCTTGCACACACGGTATTCAATAATGTTTATTAAAGATATAAGTAAGGGAACAAATGCTAGTTTTTATTCAGAGCTTTATAGGTTCCTAGTCCTTTGTGTATCTGCTAAAGACATTGCCTAGCACATAGATACTCAGTAAATTTCTAATGAATAAAGCCAAAGTTATTTTCCTGAATATGAATTCAAATTAACAACACTTTGGTCGACAGAATTATTAAAGTCTATGCTTTTGTAAAGATGAAGAAACAGGCCCCAAAAGTTAAATAACGTGCCAAAGTTCACATAGTTTTGTTGTAGAGACTTTTTTTCACTCTGGCTTTTTATTTTTTTGGTTTATTTTCTTTTTAAATTACAAAGCCTATTTTTTTCTTGCACTTTAAGTCCAGTCTAACTACTGCTACTTCCTTATTTTGAAGGAATTTCAACTCAATTGCTTCACATGTAGAAGTGAACCAGATGATTTCTAAGGTCTGCTACAATTTTTTTTAAAGTTACACATGATTTTGTGATTGTATACCTTCTCAGCAACTTACAAATATTTTAACTGAATTTGCAGTTCATTGTTAAGGAAATTATTATTTTGCTTCTTCATAAATCATGCTCATTGAAAAACACTTTGCATTGTTTTTTCCAAACATTTTTAAGGATGTCTGTGCAGTATGTACTTCTGTTTACAGAGGAAATATACATAAAAACATTACAGATCATATCTAGAATAGAAAAGGGAAAAAGTATGAAGCCTTTAAAATACTGTCTTACTTTCTAATCACTATAAATGCTTAAATGTGAAAAAGTGTTCTGTACAACCTTTTGCTTTGTTGCATATGCTTAAAATATAAGTCCATGTCTTAGTTCAGAAAAGTGTAAAGTGGTTGACAGAAGGGCAAATTATAGACTGCCAGTTCAATTCAGTTCAGTCTCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCTGGAATTCACCCAAACTCAAGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGGGTCTTTTTAAATGAGTAAACTCTGCATAAGGCGGCCAAAGTACTGGAGTTTCAGCTTCAGCACATGAAATGTTCCCTTGGTATCTCTAATTTTCTTGAAGAGATCTCTAGTCTTTCCCATTGTATTGTTTTCCTCTATTTCTTTGCATTGATCACTGAGGAAAGCTTTCCTATCTCTCCTTGCTATTTGGAACTCTGCATTCAGATGCTTATCTTTCCATTTCTCCTTTACTTTTCACTTTTCTTTTCACAGCTATCTGTAAGGCCTCCT EMBV3_16544 CTCAATGCTAGGAAGAGTGTCATTTTGCCATGTTACGGTAACTGTTTATTCTCTGTACTA Gene GeneID:540589|MTMR6:XM_002691845:119_cdna Constitutive 2 NULL GeneID:540589 12 GENE MTMR6 NULL myotubularin related protein 6 EMBV3_00487 TGGAGCAATGGGCAAAAGAGCAGAAGATCGCCAATGAGAAACTAGGAAACAAGCTCCGGG Gene GeneID:523993|PMFBP1:XM_002694908:987_cdna Constitutive 0 NULL GeneID:523993 18 GENE PMFBP1 NULL polyamine modulated factor 1 binding protein 1 EMBV3_31100 GGGGAGTCTGCTGATGGAGTGGCGGGAACTCAAGGCTGATTACTATACCAAAAACGGCTT Gene GeneID:524928|LOC524928:XM_002693563:234_cdna Constitutive 0 NULL GeneID:524928 15 GENE LOC524928 NULL similar to hCG1991368 EMBV3_22797 AACTCTTCTCTCTTTTGGAGGACTGTGATTCTGGCTGGTCAACCCAAACTCCTCTCTGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35023 TGAGTTATTTCTCTAATATTTATGGAAGCCTGGAGTGCTGCAGTCCACTGGGTTGCAAAG Gene BVV0102_084228 + 0 NULL GK000017.2:39411839-39866130 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19176 TCCTACCCTGTACACCCCAAAGTCTAAGAGCATTAAGACCTGTCTGCCATGAAACCTGAG Gene GeneID:539889|LOC539889:XR_084087:49_cdna Constitutive 0 NULL GeneID:539889 26 PSEUDO LOC539889 NULL similar to inositol polyphosphate-5-phosphatase F EMBV3_33579 CTAGCTTACAGCAAGAGAACCAAGACATCCCAGTCAGCACCAACCAGCTATCTTGGCGTA Gene BVV0102_028086 + 0 NULL GK000004.2:9414992-9471569 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14012 GCGGCTTGAAAGGGACAGAGGGATATTCAGTTTGCCACAGAAGAAGTCAAGACCTGAGAC Gene BVT0102_331876 + 0 NULL GK000016.2:57862146-58006949 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069770 1 XLOC_042056 NonCoding TCONS_00069770 XLOC_042056 NonCoding NonCoding - 16:57896701-57897797 - TSS51954 1096 2 TCONS_00069770_1 50 1 0 2.0790963956154e-10 0 0.00032084955173169 3.96012892958542e-10 0.000130636716028667 2.19100991034601e-11 0 1.10089642455284e-11 0 0 0 0 0 0 0 8.5367332520416e-09 0 0 2.62685280730941e-09 1.82854962943954e-05 1.66281445593359e-10 2.75085543144236e-09 0 5.60634162250929e-09 0 5.51432219408164e-10 2.80890745478035e-10 0 0 0 0 noncoding 0 0 0 0 0.0332848630578455 0.755384590447756 0.0349417983558328 0.508926416778415 AGGGGACTTCCTACTCCTTGCCTCTAGAAGGATGTCCAACCCCAGAGATCAGTGACATTTGAAGATCGTTTCCAAACAGCTTCTTGCCCCTCACTTCCAGGGTTCCCCCACGCCCGCTTTGCAAGGATTCTCAGCAGTCTTACATCTGCTTCTGGGCTGAGTCCACATGGGTTCCTAGCCGCGTCTGGGGTGGAGTTCTCAGACTAGTTGACAACAGCTGCCAGCAGAAGCGGCTTGAAAGGGACAGAGGGATATTCAGTTTGCCACAGAAGAAGTCAAGACCTGAGACCCTCCAAAAAGCATCCCTGGCTCACAGGTTTCTAAATTGTTCTAGGCGAAGCCGAATTTTCAAGGGGTCTAAGAAACTGGCCACAAGGAAAATACGGCCTGGAGCCAGGGCTGGAATGGGAGCCTTTCTGCTATTTCCTGAGCCTCAGGGGATTTGCTGTGACCCAGACTGCTACCTAACTTCTCTGCCTCTCTCAAGGGTCCCGGTTCTACTCCCCTCCCCACCCTTGAATGAGGACACAATGAGACCTGGTTCCCTAGTGTTTTGAAGAACTTCACAGGAATACATTATGTAATAGAGTTAAATAAACTATAGACATTAACTTGTGGGAACACCAGTCTTGCCCAACCGAAAGGGAAACTGAAGCAGACAAGCACGGCTTTAATTTCTCAGAGAACACTGGCAGTCCACTTGCTGCAAGAATTCTGTTGAATGAGGAAGGGTGGTACCCTTAAGCGTCTGAGAAGCACTTTTCTCCCAAAGCTGTTGCATTTTATTCACTCAGCTCAAGTGCGTAAGAACCTGAAGGTAATCTGAAGGGACCCTCATTCTGAAGTCCTGCTGGGTAAGGGAAGAGCCTTGATTTATATGGAGCAGGATTTGAAGACAGCACTGATGCTAGGCTGTTCCTAACCTCGGTTCTAATGGTTTCCAAGTTCCACCTACAGAATTCAGCAAAGATGTCACCATCAACCTCCTGGTCTGATGTGTCTACCTGTTGCCCAGTGCTGGGCTGGGGAGGCAGATGTATTGAAAAATCTGATCAAGTCTTTCATTTTATCTGAGATTCTGGCTCCCCATCCCCAG TCONS_00069766 s 5' 34557 TCONS_00069766 s 5' 35652 EMBV3_22124 CTGCGAGACTTCCCCATCTTTGAGAGCAACTTCGTGCAGGTGACCCGGTTAGGAGAAGTT Gene GeneID:617892|LOC617892:XR_082711:640_cdna Constitutive 0 NULL GeneID:617892 18 GENE LOC617892 NULL hypothetical protein LOC617892 EMBV3_30282 AAGGTGGAGACCTGAATCAGTATGTCCTGTCCCCCCGAGGTAAAGAGGGCAATCCAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31212 ATCGAGCACCAGCGCATCCACACGGGTGAGAAACCCTATGAGTGCCCCGACTGTGGCAAG Gene GeneID:518201|GLI4:XM_002692562:210_cdna Constitutive 0 NULL GeneID:518201 14 GENE GLI4 NULL GLI family zinc finger 4 EMBV3_06072 AGTGGGTGAAGGAGTGTGTTGGGGACAGAGATCACGATCTCATGAAACAAGGGCTGCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11710 ACGATGAGCACTAGTATACAGATGGTCGAGCTCTGTGAGGGCTGAATGAACTCTGTACTG Gene BVV0102_453768 + 0 NULL GK000012.2:11444474-11452443 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036145 TCONS_00036146 TCONS_00036144 TCONS_00036143 TCONS_00036147 1 XLOC_021095 Coding TCONS_00036145 XLOC_021095 Coding Coding MTRF1 12:11451171-11494388 j TSS26376 2895 1 TCONS_00036145_2 378 0.0829015544041451 10 0.933242317660126 0.00029167233974435 0.000210832543451421 0.000373969874950508 1.14759005016506e-07 1.0599303595561e-08 3.80761953607892e-05 9.66244500052192e-47 1.73090253781404e-17 5.8928883120473e-28 7.56735322364332e-05 4.18991841042512e-05 3.69309443230012e-06 8.31114808402084e-19 9.4346865470691e-36 2.41487267635959e-05 0.000358328341428386 2.59978582973676e-14 0.0016439594655405 1.93791860881191e-34 3.39384631163708e-06 4.79881983658922e-05 6.64704622829209e-07 0.000429219564559158 0.000765633044288643 3.45352138741664e-61 6.97162392285904e-05 5.44560102072097e-08 3.30567831849166e-14 4.38867369347095e-05 4.19224279262939e-10 XM_005213564.1 MTRF1 PREDICTED: Bos taurus mitochondrial translational release factor 1 (MTRF1), transcript variant X1, mRNA. 0.0 4682 98.40 0.912262521588946 XM_005266599.1 MTRF1 PREDICTED: Homo sapiens mitochondrial translational release factor 1 (MTRF1), transcript variant X2, mRNA. 0.0 1912 86.10 0.564421416234888 TCONS_00036145_2 sp|Q3MHI7|RF1M_BOVIN RF1M_BOVIN Peptide chain release factor 1, mitochondrial; 0.0 781 100.00 0.997354497354497 2 coding 1 0 1 1 -0.0355519381340066 0.748621074364081 -0.0192205809117403 0.707296499160695 CGAGCCCGCGTTGCCCGTCCCTTCTCCCTCCCCTGGCAAGCCACACTTTGGGTTCTGACTCCAGATGAGCAAGCCCACGGCCGTCTCGGGGAACGTTTTCTTGCTGTACCGTTTTCTCTCTTGTTTCCTTTGATAGCTCATGTTGCGCACACTCAAGAACTCCTCTGCCGCAGAGGAGTGGCGACGCCCGAGGAGGCGGGGTCGGGCTCTAACCCAGACTGGGTGAACCCGGAGGTGAAAGGGATCCGGTGACCGATGGGCTGAAATGTAGTGGATCCCAGAAGGTTCCGACTTCAACATCTGTCTCTTAATGGTCACCTCCAGTGTCATGTCCATCGCCATTCTCATCAGCTTACACAGATCCCTCTTGACACAAGGCTGTGGGTCTTTAGGCGAAACAGGAATCACACTGTCCATCGTCTGTTAAATAAGAATTGCTCCAGGAGATACTGTCATCAAGATACCAGCATGCTCTGGAAGCATAAAGCACTACAAAAATATATGGAGGACCTGAATAAGGAGTACCAAACACTTGATCATTGTTTGCATCACATCTCTGCCAGTGAAGGGGACCGGAGGTCCTTGACTCGACGGCATGCTGAGCTGGCCCCGCTTGCGGTCATTTACAAAGAAATTCAGGAGGCTGAACAAGCCATTGAAGAATTAGAATCAATGTGTAAAAGTCTAAATAAACAAGATGAAAAACAGCTACAAGAACTTGCATTAGAAGAGAGGCAAACCATTGCTCAGAAAATCAACATGTTATACAGTGAGCTTTTCCAGAGTCTACTGCCAAAGGAGAAATATGACAAAAATGATGTTATTTTAGAAGTGACATCTGGAAGAACGACTGGAGGTGATATCTGCCAACAATTTACCCGAGAAATATTTGATATGTACCAGAATTATTCAAGCTACAAACACTGGAGATTTGAACTTCTGAATTATACACCAGCTGATTATGGTGGGCTACATCACGCAGCGGCCCGAATTTCTGGTGATAACGTCTATAAGCACTTGAAGTACGAAGGTGGGATTCACCGGGTTCAGCGAATCCCCGAGGTGGGGCTGTCATCCCGGATGCAGCGTATTCACACGGGGACAATGTCGGTGATCGTCCTCCCCCACCCAGATGAGGTCGATGTGAAAGTGGACCCTAAGGACTTGCGAATAGATACATTTCGAGCCAAAGGCGCAGGAGGGCAGCATGTTAATACAACCGATAGTGCTGTCAGACTTGTCCACATCCCCACAGGACTTGTAGTGGAATGCCAGCAAGAACGGTCACAGATAAAAAACAAAGAAATAGCTCTGCGTGTGTTGAGAGCTAGACTCTACCAGCAGATTATTGAGAAAGACAAGTGTCAGCAACGAAGTGCAAGAAAACTGCAGGTGGGAACACGAGCCCAGTCAGAGAGAATCCGGACATATAATTTCACCCAGGATAGAGTCACTGACCACAGGATAGCATATGAAGTTCGAAATATTAAGGAATTTTTATGTGGGGAGAAGTGCTTGGATCAGCTAATTCAGAGACTGCTTCAATCAGCGGATGAAGAAGCCATTACTGAATTTTTGGATGAAAACCTTAAATCAGTGAAATAAAGTCTGATTTATAATTTATTATTGTAGAAATGAAATGAGCCTACATCAAGAAGTAGACCCAAGCAAGGAAGTCTTTTTGAAAGTTGATAAAGTGCAGCTAAAAATACACAGTACTCACAAAAATATTTTTTTAATGAATCAAGTCACGTTTCTTGACCTAAGAGTTTTATTTTAGGTTTCCTGTAAAGTACAGTCCAACTTTTCATGTAGAACCAAAGTATGCCTCTTCAGAAAGAGACAGTATTGAGAATTGACTGTGTGATTTAGAGCAGATCATTTGTTCTCTGTATATACCTTTTTTTTTAAAACCATCTATAAAGTACTTTTGCCTGGAAAATCCCACAGATGGAGGAGCCTGGTGGGCTGCAGTCCATGGGGTCGCTAGAGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTGCATGCATTGGAGAAGGCAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATGCCAGGGATGGGGAAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTGGCAGCATAAATTAATTTAAATACATTTAAAATCTATTACTTCAGGACTTTCCCCATGGTAGAATCTAGTGATATAAACTTATAAACTTCCTTAAAGACAACGTACTGTTATTCACGTCAGTGTTAGGACTTAAACTACTACTTTTAAATAAAATAAATAAAAGTTGTGAAGAATATGAGTCAATAACGATGAGCACTAGTATACAGATGGTCGAGCTCTGTGAGGGCTGAATGAACTCTGTACTGTGCAAACTACAAGTCAATATTTAAAGCAGACTCTCTGGCTTCTGTTTCTTATTGTTCTGACTTCATAAGCATTCACAAATGTGGTGTGATGTGAGTAATTCACTGGGGCCGGTTTTGTGCTGTGACATGTAAAACCTAGTCCTTACCTTAGAGAGCTTCCAGCTGAACAGGGAACCAAAATATGTCACCAGCCCTAATTCCAAGTAGCACACTGTATTTAGTAATCGTTCTCGGGAAGCTTTTTGAGTAAAAAAGAAAGTGGTTGTTATTGTAGACAGTTCCTCAGAAAGGAACTATATGCCAGAAAAGACTGGTTAAAATAGAGTTTTAAGACCAATTGAATTATTTGGAAATAAAGATGAGAGGAAAATTTTCTCTGAAGCTTTTATTTTGAAAATCAAGTACTCAGAAAAGTTTTACACATAATTTTAAATAACCAGTTCAATGAATTGTCTAGATTCAACTATTGTTAATATCTTGTCATATTTGTCT EMBV3_15242 GATGCCAGTCTTAGCAGTTAGGGATGCTATGATGCTGGTGTGGCCGATGATGCACTAAAC Gene GeneID:100126183|C8orf22:NM_001109967:2_cdna Constitutive 0 NULL GeneID:100126183 14 GENE C8orf22 MGC179491 chromosome 8 open reading frame 22 EMBV3_33626 GTCATTCGTCTATGATAAATTTTAGGTTGGTGAAAAGGTAATTACTGTTTTGCATTGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23610 ATCAACCATTTCTATTGTGCTGACCCTCCTCTTATCAAGATTGCCTGTGGAGGGGTCCAC Gene GeneID:509895|LOC509895:XM_002692856:2_cdna Constitutive 0 NULL GeneID:509895 15 GENE LOC509895 NULL similar to olfactory receptor 1034 EMBV3_25737 TCCCCAGCATCCATTCCTCCTTTGCCTTTTCAGGCCTTGGCTTCACAACGTTCTACTTGG Gene GeneID:529067|PPAPDC1A:XM_002698549:6_cdna Constitutive 0 NULL GeneID:529067 26 GENE PPAPDC1A NULL phosphatidic acid phosphatase type 2 domain containing 1A EMBV3_37880 CTTCTGCACCGACCTGGAAATCCCCCTCTTCTTCTGTGAAGTTGTTCAGGTCATCAAGCT Gene GeneID:511678|LOC511678:XM_002688789:176_cdna Constitutive 0 NULL GeneID:511678 7 GENE LOC511678 NULL similar to hCG1791432 EMBV3_18149 AGATCATATTTTCTGCCATTGACGAAGAAAAGGAGGGAGACTGTGCTCTACCTCTGGAGG Gene BVV0102_176393 + 0 NULL GK000015.2:82875641-82890537 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218368 TCONS_00036951 TCONS_00122162 TCONS_00057018 4 XLOC_131688 XLOC_021259 XLOC_073717 XLOC_034820 Coding TCONS_00122162 XLOC_073717 Coding Coding - 21:1772539-1775435 - TSS90921 2896 2 TCONS_00122162_4 128 0.529696132596685 1 0 0 0 3.99429237089488e-06 4.09636275561967e-07 8.52413058866487e-07 0 0 0 2.27042002203111e-07 3.82411180031261e-05 3.6839645581712e-05 3.43094684177662e-05 2.71357414579017e-05 5.73429012149388e-05 1.00289177284479e-05 0.00317577469528192 0.0015648618742292 0.00254687651403682 4.12692309504149e-07 4.66932941297714e-07 0 0.00152554386478111 0.0011050183461842 0.00196659893501018 0 8.10942159484766e-07 1.01159413821291e-06 0.000394968477206089 0.000653039532847899 0.000661454511772567 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 3e-64 251 82.86 0.0825276243093923 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 2e-09 69.8 87.50 0.0189917127071823 TCONS_00122162_3 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 4e-20 87.8 43.75 0.983739837398374 1 noncoding 1 0 1 1 -1.24075784477828 0.0930142068557468 0.608620933927897 0.000821382859058691 CCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTAGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTTTATTGAAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTTTATTGAAAGTGTCAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAAGCTAAAAGCTTTATCTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTTAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGGTAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACGAAGAAAAGGAGGGAGACTGTGCTGTACCTCTGGAGGAAGGAGAGGGCTTACAGGACGCTGCAGCCGGGCGCCCGGGCGAACCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGATTTCTTTTAAACAAAGGAGCTTTTAAAGAATACACAATATACAGAGCCTGCTCATTGCAGAAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAAGCAAAAAAAAAAAAAAAAAGAAAACTGAAAAAGAAAAAAGGAAAGAAAATCGAGAAAGATCTAAAGATAGAGAAAGAGCTAAAGAGTGAAAAGGAGAGGAACAGAGAAGGAAGGAATCAGGGAACGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAAAGAAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACTAAGGAAAGAGAAGGGTAGCAAAAAAGCAAGGGGGAGAGAAAAGTGAGAAAGGCAGGAAGAGAAGGAGAGAGAGAGAGAGAGAGACAGTAAGAGACGCTGGGACCCCGCGCCCTGGCGAGCTCCCTCCCCTCTGCGCAAACCTTTAAAAAAACAAACAAACAAACAAACAAAAAAAAACTTATCCACCACTTTCTGATTTAAGGCGATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCTTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCGGGGGTGGAGTGGGGGGGCGGTCTCACCCAGGCTAAGAAAAAAGCGGACCGGTAAGGGGATTTAGCAACAATTTTAACCCCTGACTTGCGGTTGCTCCGATTCCAATGGGAGTAGCTGGCCCCCTGCCTGAGGGCATTGTAGGCCTTGTGCTAGGATGTAGCTCGCTTTCTTTTCAAGGAATTTGGGTGGTGTATGGTGTAGTAGATTATGATTATATTGGAGAAATTAAAGTTTTGATCCCGCCGCCTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGCTTTTGCTTTTACCTTATCAGACAAGAAAAAACTTGATTTCTCAAGCTAAGAGCCACAGAGTGTTTAGATCTAGTGATCTAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTTTAAAAGATCTTTTAATTCAAGAAAATAAAATGTCAGGGCTATTAGACACAGGAACAGACGTCTCTTAACATTGCTGGGAAAGACTGACCCAACTCCTGGCCAACACATACTACTGAAAATGAGTTGAGACTAGAAAAAGTGGTATGCGGGGTGGGAATGCTGTAGAGAAAAGGGTGAGGGAGAGTTTAAAACCTTGACGAGTAGTGAGTTCCCCATTGCTGGAAGTATTCAAGCAAAGATTAGATGGTTGCTTGTCATCTAAAAGGCTATAGACCAGATTTAGATTACAAAACGATAACTGGAGAAGCTTATAAACATGTTGTGCAACACCTCTTTACTTGCTTCTCATATTTAGGTCTGCCAAAAGTTTTAAAAACTGATAATGCCCCTTTGAAGCTGTGGAGAGATCGTTTACTAACTTTAAATGATTTCCAAAAATTATTAGGGGACATTAATTGGATACGCCCTCATTTAAAACTGACTACTGCAGATTTAAAGCCTTTGTTTAATTGCTTAAAAAGCGACCCTAATTCCAGTTCTAAGTTGACTAATGAGACAGAGTTGGCTCTTGTTAAAGTAGATGAGACTTTAAATGATCAGTTAATTAGGATTAATATTATAAAAAGATGAAATTAAATTATTCTTGCCATAAAACACACCTACAGGGTGATTGTGACAAAAAGGCCTATTGGTTCCATCTACCAGTGACCCCAAGAAATACAGTTTTATCTTATCCCCGCTTGGTGGCACAATTAATTATAAAAGGAGGAAAAAAAGAGTGTGGAACTTTTTAGAAAAGAAGTAGCAAATATAGTAATTTCACTCAATAAGGATCAACTGCAAGTCTTTTACAAAGTAGTGATGATTGGCAAGTTGCCCTGATAGATTTCAGGGGTCAAATTTTGTTTCATTTGCCCTCAAGCCCCCACAGTAGTTAAAAGTTCAAAAATGTTAGATTGGCAGTTTGAGGATACCTGTGGAACTTTCCAAGCCTATGTAGTTCCTATGCTCCCCTTTACCCTATGGGGGAGGGACGTGCTG TCONS_00118509 TCONS_00118510 . 3' 69017 TCONS_00118509 TCONS_00118510 . 3' 71912 EMBV3_16037 AGCACACAGTCCTGGAAATCAGGTGGCGCTAGTGGGAAAGAATCTACCTGCCAATTCAGG Gene GeneID:511299|SETMAR:NM_001075508:35_cdna UTR3_Alt 1 NULL GeneID:511299 22 GENE SETMAR MGC139682 SET domain and mariner transposase fusion gene EMBV3_26119 AGGCCTGGCTTGAAACCTTTTCCTGGGAACATAACTGTATCTCCATCCCACTTCCCCTTG Gene GeneID:286869|CHI3L1:NM_001080219:25_cdna Constitutive 0 NULL GeneID:286869 16 GENE CHI3L1 CLP-1 YKL-40 chitinase 3-like 1 (cartilage glycoprotein-39) EMBV3_29787 TTGCAAAAGGAAAGTGTTGGGAATGGAGCAGGTGATTGATTGGAGCATGAACTGAGTATT Gene GeneID:516747|ARMCX3:XM_002699820:55_cdna Constitutive 0 NULL GeneID:516747 X GENE ARMCX3 NULL armadillo repeat containing, X-linked 3 EMBV3_31779 GAGTATAATGTCCACTTCTTTGACTAGCCCAGAGATACGGGACAGTTTGCCTGAGTCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16883 TGGACAATGCAGGCAAAACCACTCTTCTACACATGCTCAAAGATGACAGACTGGGGCAGC Gene GeneID:517171|SAR1A:NM_001034521:320_cdna Constitutive 2 NULL GeneID:517171 28 GENE SAR1A MGC127517 SAR1 homolog A (S. cerevisiae) EMBV3_05342 GTCTTACAAGCCCGATACGGCTGAGATTGAGAAATTCGGTAAGTCGACGTTGAAGAAAGC Gene GeneID:100297257|LOC100297257:XM_002696964:118_cdna Constitutive 0 NULL GeneID:100297257 22 GENE LOC100297257 NULL similar to thymosin, beta 4 EMBV3_10014 TTTACAGAAGACCTTCAAGAAAACATTCCACTCATCGTAATTCGCGTGCTCCGAGCCCTC Gene GeneID:617853|SPATA3:NM_001076480:187_cdna Constitutive 0 NULL GeneID:617853 2 GENE SPATA3 NULL spermatogenesis associated 3 EMBV3_19937 TACTCACCCAAGTCCGACGTCTGGTCCTTCGGGGTCCTGCTCTACGAGGTCTTCACATAT Gene GeneID:521816|SRMS:XM_002692248:1527_cdna Constitutive 0 NULL GeneID:521816 13 GENE SRMS NULL src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites EMBV3_03891 CGAGGCTGACCACTCTGCTAGGTAATTGGGATATAGTGTCTAACAGCAATGATAAGTTCC Gene BVV0102_138671 + 0 NULL GK000014.2:52950981-56307789 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056753 1 XLOC_034556 NonCoding TCONS_00056753 XLOC_034556 NonCoding NonCoding - 14:53993044-53994536 - TSS42430 1492 2 TCONS_00056753_2 55 0.0784182305630027 1 0 0.000200620159291835 4.04092346107475e-05 0.000130250672598112 3.3394778987291e-05 9.59638698501657e-05 0 4.69037837654319e-05 7.92858078599668e-06 0.000129563286350865 0 0 0 0 3.15280893776553e-06 1.37014105063664e-07 0 0 0 9.61250015994074e-05 4.33799820394901e-05 2.84854384156879e-05 0 0 0 5.57250688406266e-05 8.49989365189321e-05 6.28327640916849e-05 0 0 0 XR_237306.1 LOC101908082 PREDICTED: Bos taurus uncharacterized LOC101908082 (LOC101908082), 6e-25 120 69.35 0.164209115281501 0 noncoding 0 0 0 0 0.024243185904592 0.872481507378808 0.0404513748922709 0.41975165707146 GTTATATCTACTCTAGGCTGACCACTCTGCTAGGTAATTGGGATATAGTGTCTAACAGCAATGATAAGTTCCTTAACTTCAAAGAGCAAACAGTCTGGGGAAGATATAAGCAGGTAAATAGGCAATTTTAATAGAATGTAATAATTGCCCAAATAGAGGAGTAACTTCCCAAAGGAAGTGATCTCTAATGGAGAGTAAGGGATGAGAAGGCATAAGTTACATGTGGCTGGGGAGGATGAGTGTGAATGAGAGAGAAAAGGCCAGTATCAAAAAAAAAAAAAAAAACAGAATACATTTGTGGTACCATTGACAAGCCATTTGGCCACTGTTCACAAAGATAGTGCACAAAGAGGGCAGATAAGTCTGTGGATTGAGAAGATGGAACAGATACCTTCTGTTTGGGAATTTGAGCTGCCATGGTGTGTAAAATTGGTGACTTGTGGTAGATGGGTTAAACAAAGCTGGAGCTGGATAAAGAGAAATATATTAGAAATAGATTTGAGAGTCATAAATTGATCAATGAAATTATCAGATTGGTTTATTTCTCTCCCTGTGTTCTTGTCTCATTGCAAAAAATTTTGAAACAATGCTCTAAAGGGTTTAAAACAACAAACAAGTTACAGCTCAGTTCAGCTCAAGTAGACAGATTGTTTACTAGACAGACACTCCCAAGACATGGGAGCAAGCCAACCCCAAAGGAGTGGTCCTCCCCTCCATCCCTCTTGGCTCCCCCTTTTTTTATACTTCCCATTTCCTCTTTTTGGTTGTGCCCTGTGCAAAATAGGACTTGTATCCACCACCAGTCAATTAAAGGGAATGCAAACGGGCATACGTTCAAAGTAAGTCATATAACAGAAGGCTTTGTTGTGTATGTCTTCCCATAATTCAGTCTGTTATAATCAAATGTATATATGTGTAGAATATTTATGAACCCTTAATGGGCTCCTAGCTCCTAAGGTTAATTGGAGAAGTCCTGTGGTTAGTTTATATCCAGTGTGTGCCTAGGATTCATGTGTTGGAGTTGGAGAAGTCTCTGTGGTTATTTTTTGTAGCTTATCTGTGAGCTCTCCTGGGTGTGTCTGGCATGGGACTTAGAGATCAGCTTCCATCCTTTTCAGCTAAGCCACCACACCTTGTTCATGCCTAACTTCCTACCTAACAAAACTAAATTCAAAGGGCACATATAGAAATTTAAAGACTTGTTATATTTTCAACATATGAAGCATTCTAGAGGAAAAGAAAAACTGCCACAGGTCTTACTTTTGACAAATATATATTAGGAATGTTAAATGGGAGGTCAACCAAAAATTTAGTGCCAAAGTGGGTATTCTGAGAGAAGTTTTAAGAAGATAGAAATTTGTATGGATTGAAACTATCATGGAAGAATTTTTGAGGAATATATATGTGTGTGTGTTTGGGTGTGTGTGTGTGTGTGTGTGTGTGTAATGTCCAAAGTGGAGCATATTAAAATATCATTTTGACCAAGAACATG TCONS_00051936 . 3' 1042065 TCONS_00051936 . 3' 1043556 EMBV3_25440 CCCACCGGCCAAGGAAAAAGAGACACCAGAACTTTGAGGGCACTATCAGACTGACATGGC Gene BVT0102_081552 + 0 NULL GK000023.2:40611239-40616325 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135184 TCONS_00133436 TCONS_00133442 TCONS_00133425 TCONS_00133432 TCONS_00133444 TCONS_00133428 2 XLOC_081655 XLOC_081110 Coding TCONS_00133442 XLOC_081110 Coding Coding ATXN1 23:40423226-40614099 j TSS99656 9839 1 TCONS_00133442_3 846 0.018192905783108 5 0.948478561549101 0.000821752290298455 0.000395462316820071 0.000703163906591557 0.000541554548908752 4.20745302411642e-08 9.00668516875392e-11 0.000185628759943877 0.000557298299972484 0.000671416494447047 0.000188027381828444 5.28173405728653e-05 4.29383208780937e-05 1.58150792050857e-08 1.5785113704814e-14 0.000268427148135573 3.34201822510802e-11 8.52692661772862e-80 8.66292382389869e-06 0.000106240660862857 0.000370437284681495 0.000698300232548119 4.95787910234093e-66 4.44082461787242e-11 3.11534917889814e-12 0.000334820419859927 4.33323305489884e-06 0.0006126949071914 5.11349293349027e-06 1.38704588671704e-09 3.63257930679708e-16 XM_002697578.2 ATXN1 PREDICTED: Bos taurus ataxin 1 (ATXN1), transcript variant X1, 0.0 6307 100.00 0.35532066266897 XM_005249287.1 ATXN1 PREDICTED: Homo sapiens ataxin 1 (ATXN1), transcript variant X1, 0.0 5835 81.90 0.607582071348714 TCONS_00133442_3 sp|P54254|ATX1_MOUSE ATX1_MOUSE Ataxin-1; 0.0 1279 81.40 0.962174940898345 2 coding 1 1 1 1 0.0120938621461581 0.948262483501641 0.0113862893831301 0.852895699117488 GTGAGGAGTGCGGCCATGTCCGTGTGTTGCTCATCGTCTGTTGCACACGGGGATTTGTCTCTCCAAGGCCTCGGTGGAGGACCCCCTGTCCAGATGTCTCTGTCGCTGTCTCTGGGCTCTTCCTCTCATCTCGAGCCTGGGCAACTACAAGCCTTGAAGACCCGCGGGGTGCGGCCCCACGACACTCCTTTTTCAAAGGTTCACTCCTCTGGAGATAAAGGAATCATGCACATGATTATTTTCTTCATATTAATTGTTCAGAGCTCCGTCTTTAAAATTCTCGTACTCAGCCAAGCGGTGGGAGGTCCACGGTCTTCAGAAATTAGCTGCGTGCCTATTTTCCAAAGAAATTAGTCCGTTTTCTGGGTGGAGAGAGACCAGACTGCTATTTTCACAGGATTCCAGAGCAGCTGCTGGAGGATCGCACCCACGGGGAGATGATTCCTCATGAAGAGCCTGGATCCCCTACAGAAATCAAATGTGACTTTCCGTTTATCAGACTAAAACCAGAGCCAGTCCGACAGTGAGACGGTCACCGTGGAGGGGGGACGGCGAAAAATGAAATCCAACCAAGAGCGCAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGCCGTCCTCGGAGGACAAGGCGGTGCCCAGCGACAACCACCGCGCGGAGAACGCGGCATGGCTCCCCGGCGCCCGGGGCCACGTGGGCGGGCGGCTGGGGCCAGCGGGGCCCCCGGCGGAGCTCGCAGCGGAGCTCGGTTTACAGCAGGGAATAGGTTTACACAAAGCGCTGTCCACGGGGCTGGACTACTCCCCGCCCAGCGCGCCCCGGTCCGTCCCGGCGGTGACGTCCACCACGACGATGCCCGCGGCGTACCCGCCGCCCCCTCCGTCCGGGGCCCCAGTATCCCCGGTGCAGTACGCCCACCTGCCGCACACGTTACAGTTCATCGGGTCTTCCCAGTACAGTGGGCCCTACGCCGGCTTCATCCCTTCCCAGCTGATCTCGCCCACAGCCAGCCCGGTCACCAGCGCGGTGGCCTCGGCGGTGGGCGCCGCCACGCCCGCTCAGCGCTCCCAGCTGGAGGCCTATAGCAGCCTGCTGGCCGACATGGGCGGGCTGAGCCGAGCCTCCGGACACAAGGCTGAGCCACCGCCACCGCCGCCACCGCCGCAGCACCTAGGACGGACAGCAGGGCTCCTCCCCCCGGGGTCCCCACCGCACCCCCAGCAGAGCCAGTACGTGCGCATCTCCAGCTCGCCGCAGAACGCCGCACGCCCGGCCTCGCCGCCGACCCTCCCCGTCCACCTGCACACGCACCCGACCATGATCCCACACACGCTCACCCTGGGGCCCTCCCCGCAGGTGGTCGTGCAGTACACCGACTCCAGCAGCCACTTTGTCACCCGTGAGGCCACCAAGAAGGCCGAGAGCAGCCGGCTGCAGCAGGCCATGCAGGCCAAGGAGATGCTGAACGGGGAGGTGGAGAAGGGCCGCCGGTACGGGGCGCCCCCCGCGGCCGACCTGGGCTTGGTGAAGGCGGCCAGCAAGGCGGTGCCCCACCCGTACGAGTCCAGGCACGTGGTGGTCCACCCCGGCCCCGCTGACTACAGCGTCCGCGACGCGTCGGGGGTGCGGGCCTCCGTGATGGTCCTGCCCAACAGCAGCACCCCCGCCGCTGACCTCGAGGGGCAGCAGGTCACCCACCGGGAGAACTCGCCGTCCGCCCTCAACGACAAGAGTGGCCTGCACTTGGGGAAGCCCGGGCACCGCTCCTATGCACTGTCCCCGCAGCAGGTGCTGGGCCCCGAAGGTGTGAAGGCCGTCGCCACGCTGTCCCCGCACACGGTCATCCAGACCACACACAGCGCCTCTGAGGCCCTCCCCGTCGGGCTGCCGGCCACGGCCTTCTACGCGGGCACGCAGCCGCCGGTCATCGGCTACCTGAGCGGCCAGCAGCAAGCGATCACCTACGCCGGCGGCCTGCCCCCGCACCTGGTCATCCCGGGCACCCAGCCCCTGCTCATCCCCGTGGGCAGCGCTGACCTGGAGGGGTCGGGCGCCGCCTCGGCCATCGTCACATCGTCGCCCCAGTTTGCTGCAGTGCCTCACACGTTCGTCACCACCGCCCTGCCCAAGAGCGAGAACTTCGGCCCCGAGGCCCTGGTCACCCAGGCCGCCTACCCGGCCATGGTGCAGGCCCAGATCCACTTGCCCGTGGCGCAGTCTGTGGCCTCCCCCGCCGCCGCCGCGCCCCCTACGCTGCCGCCCTACTTCATGAAAGGCTCCATCATCCAGTTGGCCAACGGGGAGCTGAAGAAAGTGGAGGACCTGAAGACGGAGGACTTCATCCAGAGCGCGGAGATCAGCACTGACCTGAAGATCGACTCCAGCACGGTGGAGAGGATCGCAGACAGCCACAGCCCCGGCGTCGCCGTGATCCAGTTTGCCGTCGGGGATCACCGAGCGCAGGTCAGCGTGGAAGTTTTGGTAGAGTATCCTTTTTTTGTGTTTGGACAGGGCTGGTCATCCTGTTGCCCGGAGAGGACCAGCCAGCTCTTTGATTTGCCGTGTTCCAAACTCTCCGTCGGGGACGTCTGTATCTCGCTCACCCTCAAGAACCTGAAGAACGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCGGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTCGCGGGCAGTAGACACAGGTATGCCGAGCAGGAAAACGGGATCAGTCAGGGAAGCGCCCAGATGCTCTCTGAGAACGGCGAACTGAAGTTTCCCGAAAAAATAGGATTGCCGGCCACGCCCTTGCTCACCAAAATAGAACCCAGCAAGCCCGCGGCCACGAGGAAGAGGAGGTGGTCAGCGCCCGAGACCCGCAAACTGGAGAAGTCGGAAGACGAGCCACCTTTGACTCTTCCCAAGCCTTCTCTCATTTCTCAGGAGGTTAAGATTTGCATCGAAGGCCGCTCTAACGTAGCTCTGCAGAGTTTCTCACGGAGCAAGATGCTGAAAGTTTCAAAGTGGTTTCAAGGGATGAATGTGAATTATGAACTTGTATGTGACAATGAATGACCACCAAGTACAGCCTGACAGGAGGCACTCTTCACTTTGATGTCTCTGAAAGGATTTAAAAAGCATATGCAGAGCTGGCAGAGGAACTGAGAGGGAAGGGATGGGGAAAAAAAAAAAAAAAGAATACTCACTTTTGTCCAGTGTTTTTCTTTTTAAGATGAACTTTTAAAGAACCTTGCGATTTGCACATCTTGAGTTTATAAATTTGTGTGATATTCCTGCAGTTTTTATCAAATAACATTGTGGGAAAGGCTTGGGGGACTGAACGAGCATAAATAAATGTAGCAAAATTACTTTCTAACCTGCCTAAACTCTAGGCCTTTTATAAGGTTATGTTCCTTTCAAGATTCATTTTTGGTCTTCTTACCGTATCTGTCACATAAAACCAGGTCTTAGCAGGACAAGTCTGAGAATTTTCTTCAGATTCATTGAGAGAGTTTTCCATGAAGACATTTATATATGTGAGCAAGTTTGTTTTTTTTTTAAGAAAACAATTATTATTGTTGTTATTAATGTTATTTTCAAAATGACTTTCTTTTTCCATCTGAAATCAAGATTTAATGTTTGGTACAAACCCAGATAGGGTCTTTCACAGTTGAGACCTTTTATCCCCAGAGATCTGAAAAATTGTTTGTGGGTTTTGAGTGTGCGTTTTAAGTGCTTAAAAGTTTTATAAGGAGAGAGAAATTTTTAAATATTCTTACTTGGAATGGCTGCAAAGAATCTGAACAAATACCTGATTTTTCTTTTACCATTGAAAATAGTACTTTTTCCATTTCACAGATTAAAAAAAAATTCTCGTCAGCCCACATTCTGGCTTTCCAGTATTCCTTCACATTTAGCTCTCAGCAGAACTGATGATTTTTAGAAACCATTTCTGGGGTGTACCAAAAACATTGGAGTAGGTTTTGAACTGCTAGATCAGTCCTTGACTTTCTTCGGTGTTCATTACCCTCTCAGCATGCTAGCAGAGAGCTGGGTGAGTCCATTCTTGCAGTCATATTGCTTATTTAGTGCTGTATTTTTTTAAACGTCTCTGTTCAGAGAACTTGCTTAATCTTCCATATATTCTGCTCAGGGCACTTGCAATTATTAGGTTTTGTTTTTCTTTTTTTGTTTTGACGGTAAGAGGAATAAGGGGCTGCCATACAGACTTTGTCCTCCTCAGTCCCATTCACGTGGACTCAGAGAAACACCCACCACCTTTTGGCTTCTTTTGAGTATTGAACTAACCGGATCCACACCTCCAACACTAAAACGGGAAAACATGCGTGGTTTGGAGCAATAGGAACATCATCATTGTTTTTCGTGCTTTTGTTTCAGGTATAGGAATTATCAAAGAGTCGGTTCTTTCTAAACATTGTCCCGTTTCACCTTCCTGCTTCTTTAGTGTGGGCAATACTTTCCGTGCCAATAGAGTCTGATCAGTGTGCTCTAGAGAAAGTGTAGGTAGGCCCCTCTTGGCTTTTTCCTTATTTTCTCCATCCTTTTCCTGTGCCGGCCGGCCGGAGAAGGGCTGGAAGGAAGGAGCCAGGAAGGGGAGAGCCTCCTGCTGGGCGATTGCCCTGCTCCGGGAAGCCGAGGCCCCGGGGCAGGGAACTTTCGGAGGAGCCCCGCGTTTCCCTTGCCCTGGTGCAGGAAAGAGCAAACAAAGGAGATCGTCCCCTCCTCTCCGCGAGGAATAGTGGCGCGCAGACGGGAAGCAGGCAGACTCATTTCTAAGGCGCACTCTGGGGCAATCGAGCCAGGATCAGCCCCTGTTCCACCGTCCTTTCCTCAAGTAGGTGGGCCCCCACCCGCTCAGGTCTGTATCCTGGAGACTTGGAGCCCTGCCTCCTCCGAGCGTGGGCAGGAAGCGTGGTCCACCGCGTGCGCGCCTTCCGAGCCTCGGGTGCAGGCGGCTGCGGAGGGGCCGGGCCTCCTGCGGACAATGGCCACCGCTCCTCTGTGGCAGCTCTCGCCTCCAAATAGGAAGGCCATCTGGAGGACAGGGGCCCTCCTCTCGTTGGCACACGTGGGCGAGTGCCGAGGCCCCCAGAGCAGCCCGGTCACCGCACCCGCGTAGCCCACCTAACAGTGCCGGGCGTAGAAACTCCGGCGCCGCGCAGCTTGCGAGGAGCAGCCATGTGCCTCTGTGCCGTGCCCACTTTGCAATATTTACCTAACCCATCTTTTGTTCTTCTTACCCGTTTTCCATTTTTAAAGTAGTAACAGCAGGCCTTTTGCGTTTACAGTGGAACACAATCACAAAGAAATTAGTCAGGGAGAAAAGAAAAAAAAATTCACCAACAAACAAGGACCTCTCTTTCTAGGGATTTCTAAATCTATAAAATGACTGTTCCTTAGGATGTTTCAACTTCAGAATTATTTCAGTTTGGGCCACATTGGGGGCGGGGCGGGACGGCTAGAGAGATGGATACCACTTACCTCAAATCTTTTCAAGTGGAAATCCAAAATTGCTTTTTCATTTGGACGTTCAGGATGATTTTCTATGTCGGTCAATTTTGTGTCTTTTCCAACTCACCCCCATTTGTTTTGGGAGGAATTTCTTCTTTTTTTTCCCATTGCTGTCCTCAATCCCATCTCACCCTGAATCATGACCCTCTGTGTGTTCGGTTAGGTGAGCGCTTCGGGTTTTCTCGCCCACCGGGAAATGGCAGCACCCCCTCCTCCTCCCCCCCAAGGAACTCTGCAGAACCTTTCACACCTCTAACTCAGGGACGGGGCTGGCGTGTGTGTGGTACACTGACGTGTCCAGAAGCAGCACTTTGACTGTTCTGGGAGTAGGGTTGTACAACTTCAAGGAATGTTTGGATTTCCTGCATCTTGTGGATTTCTCCTTAGATACCGCATAGATTGCAATATAATGCTGCATGTTCAAGACGAACAGTAGCTCCTAGAAATCATAAAATCCACTCTTTGCACATAGTTCGATCTTTACTGAAATACATTGCCAAAATTTACTTTTGTTGTATAGCTTTGGAATTTTTTTTTTTTTAAGGAAACAATTGACAATACTGTTTAACATCTGTGACTACTAAGGAAGCCTGTTTGTTTCATAGAGGAAAAAAAAAGTCTCAAATGCTTTTGAAGACACTAAATGCCATGCTATTTCAGATCTGGGTGAAGAAGCAGAGCTCTGGGGATGGAAGGCCGGGCTTTTTGAGCTGTGTTGGTTGTCATGGCTACTGTTTGATGAACTGTAAGCAGCTCGACAAACCGTGGTCCGTTTCCTCCTAAAACCCTTTGCACATCCTATCTCCTAGTCACCCATGATAATCCCAGGTGAAAAAAGGGCCAGCAGTCTCCATGGTCCAATCCCGCTTCTTCAGGGTGATGTGAAAGCAAAGGAAATGACGCTGTGTGGGCTTTTCAAGCGAAGCGGAAGTCTCTGCTTCCACCTTTGTTTTCAACCCAGAATTTCTGAAATAGAAAATTTAAGAACACATCTAGTAATAACTATACAGAGAACATACTTGGCTATAAAGCACATGCCTATCTATGCCATTGTGTTAGGTTGGTTTCCTCTTTTTTTCCTCCACGGACAGTGTTGTGTTTCTGTTGATAGGGAAACTCCAAACTGTTTGCACACCTCTACTCCGGAGCTAAGATTTCTTTTACATAGATGACCTCGCTTCAAATAAGTTACCTTACTGATAGATCTTTTCTTGTAGCACTATACCTTGTGGGAAATTTTTTTTTTTTAATGTACACCTAATTTGAGAAGCTGAAGAAAAAAAAAACTTTGAAGCACTCACTTTGAGGAGTACAGGTAATGTTTTACAAAATTGCACAAAAGAAAAATGAATGTCAAAATGATTCATTCAGTGTTTGAAAGATATGGATCTGTTGAAACAATGAGTTTCATACCTTGTTTGTAAAAAAAAAAAAAAAAAGCATAAAGGTTGAAAGTTACATGTTTTTTTGTATATAGAAATATGTCATGTCTAAATGATCAGATTTGTATGGTTATGGCCTGAAAGATTACTACTTAAAAGGCTCTTCAACTATACCTATGCTTCCTCTAGGTTTTTGTTACATAGAACCCTCTTCTGAGGGAGACTAATTCTGTATTTTGCAATTAGAGAATACTGTTCATTCCTATGCCGAAAGTACTTCTCCGAGCTCCCTTCTTAGTTTAAACTCTTAAGCCATTGCAACTCCTTTTTCTCCAGAGATGATGTTTGACATTTTCAGCACTTCCTGTTCCAGTAAACCCAAAGAATATAATTCTGAACAAGAAGTGTTTGTAACAAGGGATCCTGGCTACCAAGAAAACGGGGCTCATCACGAGGACACACACACACACAAATGTTCAGCCTTCTCTGCCCCCCGACACCTCATTTCAATGGCGGGGGGTGGGGGGTTAAACAAGAATTTTAGTTGAGATGCCTCATTTCACTTTGGTTTGTTTTTTTTTCTTTCTTTACCATTAAGAGGCCAAAATTAACGTGGAGCAACTTCTCAGAAGTCATATTCTGTCCAGAAATCAAGCCAGCAGAAACTGGACAGCTGGCAGGGGAGGGGCAGGATGTTGGGCAGATCCCCCCTCCAGTTCTTAAAATTCAGAATCTGAGCCCCTCCCTACATTACACGCAATGTTTCTGGTAGCTGACATTCACCTGTACGACGGCGGGAGGGAACAGCGGCTTCAGTTCTCGCGTCCTCACGACTTGCATACAAATGGTTCAGCTGTATTAAAATTAAGTGCTTTTGGCCAATAGGTGGTAGCTCTCCAGTAACCGTCTCTTAAGAATTTCCGTCACTTTTCTCAGCTGAAAGGACTCCAGTCTTCCACTGCAGATAATTGGAGACTTCACCCAAGTTTTCTTTCCCTTTAGTTTGTTCGTTTGCTGTCTGGGACGGCCGATGAGCCAGTCTCCTTTTCCATGGCCAGTCTGAAGGCCCCCTTTGGAAGTGCTGTTTGCAGTCATCCTTGCCGAGGTAACAGGAACTGTCCTCTGGAATAAATGGCAAGTCTGAACAGTTACCAAGCTGGGTGTGTAGGTTTCCTCTGGTTCCTAACACGAACCGCCTACTCTTCAATTAATCCAGTTCAGGAGTGGGGTGAATTTCTTTATTGTCAGTGAACATTAAACTTGATACCTGTGTACATCAGTTCTGTGAATTTGGCCTTTTAGGGGAGGTTTTTTTTTTTCCTCCTCAGCCTTCACTGCTCCCTGTACACCCAAATTAGTGTCAGCTGAAAGGCTCCAGCAGAGCCCTGCCAGCATTTTCTGGTGGCCTTTGGTTAAGACAAGAGTCCTAATTTCTAGCCAGTGGGGTCCTGGCCCCAGGGCCATCTCTGAGAATCACACCGAATGTGTTTTTCTAATATCAGCTCATGACCTACCAACCTTCCAATCGTACGCCTCCCACCGGCCAAGGAAAAAGAGACACCAGAACTTTGAGGGCACTATCAGACTGACATGGCCAGTACAGAGGAGAACTAGGGAAGGGATGATGATTTGCACCTTATTGAAAAGAAAAACTTAAGTGCATACATAGTTAAGAGCTTTTATTGTGACAGGAGAACTTTTTTCCATATGCGTGCATACTCTCTGTAATTCCAGTGTAAAATATTGTACTTGCACTAGCTTTTTTAAAACAAATATTAAAAAAAAAATGGAAGAATTCCTATTCTATTTTCTAATCGTGGTGTGTCTATTTGTAGGATACACTCGAGTCTGTTTATTGAATTTTATGGTCCCTTTCTTTGATGGTGCTTGCAGGTTTTCTAGGTAGAAATTATTTCATTATTATAATAAAACAATGTTTGATTCAAAATTTGAACAAAATTGTTTTAAATAAATTGTCTGTAAACCAGTACAAGTTTATTGTTTCAGTATACTCGTACTAATAAAATAACCGTGCCAATTGCAAACGTGTCTGTGCCTTGTGTCAGGTCCTTGGAAACCAGGGAGGCTGAGGAAGTGGTGGGCCTTCTTCTTGATCCGCTGTGATCGCTGGGTAGGTTTGTGGTGGCAAAGGTGACATAAGGCTTTGCCTTTCTTACTAATTTTGGGGAGTGGTAAGTGGGTCGGTTGTGCTTGAGATGAGAATCAGATAAAAGTCAGGTTTCAACATCTGATGTTTCAGCTCATTCCATTTGTTTCTCCTCTCTGCACACTGCTGTTTTTACAAGAGATTTTTCTTCTCAACAGAATTTGGCATCTTTGTAGGCTTGTAGCATTATCGATATGTTTCTGTAAGCTTTGCTGCACACTGGTTAATGGTGTGAAGGTGGAAAGTTCATTTGTGTTTCTTGGAGTTCATACCTGTTAGAAACTCAGAGGTTTGCACGGTGTCCGCTCTCAGATGGAGGAGACTTGGCAGTTGCCCCAGAAAGGAATTCCTCCAGGACCCAGTCAGGTAAGGCCCTCTACCTGCATCTGCACGCGTGGCTGACCAATCCTTCCAGGCTCCAGCTTCTGCAGTGCTGGAAGAGAACTCTTGGCATCCAATTCAGCGTTGTTGCTCACCCCAGGCAGGGACGGGTATCTCTTTTCCTGTTAGTCGTCTTGTTTCGGTGTATAGGGACATCTCACCAGGACTCTGCTGTTAGGCCTGCGGCATCGAGGTCCTGTTGTACTAAGAATGCTAGTGTGAACGAATGTTGGTGTGTAAATTAGCAGTGATGCACTGAGCCTTGAAACCCAGACAACGAGGCTGTTCAAGCCCTCATCCTCCAGAACAGTCTGGGCAGACGTGGGCCGCTCTGATGCAGCAGTCTGGACTAC EMBV3_38238 ATAAATCCCCGTCCCTCCAGCTCCCAAGAGATGTTTCTCATTTTTGTTTCACTTTGGGCG Gene BVV0102_352155 + 0 NULL GK000002.2:87087609-88248732 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105727 TCONS_00105736 TCONS_00105734 TCONS_00105730 TCONS_00105735 TCONS_00105729 TCONS_00105731 TCONS_00105728 TCONS_00105732 TCONS_00105733 1 XLOC_062631 Coding TCONS_00105732 XLOC_062631 Coding Coding SATB2 2:88246041-88327958 j TSS77947 4779 1 TCONS_00105732_4 481 0.12241054613936 6 0.941732994775136 1.38486533330779e-05 1.69108227940145e-05 0.000254827578770435 0.000284096704509714 6.19387234866352e-05 3.85635024614538e-15 9.0339397811583e-05 0.000323225890984484 0.000181274285648893 6.17029354565945e-75 1.02843590697228e-25 6.51986318537416e-88 1.31092325521403e-05 0.000103482729411561 3.72035381870723e-92 6.2897225584795e-17 7.81635201541485e-77 1.07892726490008e-20 5.30591070392756e-05 6.21263354155942e-05 2.78945792266626e-06 2.8537035538126e-32 8.07040354653358e-26 2.93183971456857e-107 3.17688945733655e-38 0.000256657401540551 0.000599505552622178 3.58250578601744e-63 1.22269991587389e-59 1.12083244015741e-78 XM_005202662.1 SATB2 PREDICTED: Bos taurus SATB homeobox 2 (SATB2), transcript variant 0.0 2890 100.00 0.335007323707889 XM_005246396.1 SATB2 PREDICTED: Homo sapiens SATB homeobox 2 (SATB2), transcript variant 0.0 5752 90.19 0.87758945386064 TCONS_00105732_4 sp|Q9UPW6|SATB2_HUMAN SATB2_HUMAN DNA-binding protein SATB2; 0.0 981 99.58 0.997920997920998 2 coding 1 1 1 1 0.121118693777651 0.321057623134777 0.0380290303990545 0.516489427884044 GGAGTTTTATTTCCTCTGCAATTTATGGAACCTTTTCAGAAGGATGGGGGTTAGCCCTTCTTTAAATGTTTGATAGAATTCACCTGTGTAGCCATCTGGGACTTTTGTTTGTTGGGAGGGTCAGTGCTTGTGATTGGTCTGCTAATGTTTTCTATTTCTTCCTAATTCAGTCTTGGGAGCTTGTGACTTTCTAAGAATTTGTCCATTTCTTTCCGGTTGTCCGTTTTATTGGCATACAGTTGCTTGTGGAAATCTCTTATGATCTTTTGTATTTCTGTGGTGTCAGTTGTAAAGTTTACTTTTTCATGTCTAGTTTTATTCATTTGAGTCCTCTCTCTCTTTTTTTTCTTGATGAGTCTGGCTAAAGGTTTATCAATTTTGTTTATCTTTTCAAAGAACCGACTTTTAGTTTCATTGATTTTTGCTATTGTCTTCTTTGTCTCTGTTTTATTTATTTCTACTCTGATGTTTATGCTTTTTTTTTTCTTTCTGCTAACTTTAGGTTTTTTGTTTGTTAGTTTTTCTTTCTCTAGTTGCTTTAGGTGTAAGGTTTGGTTGTTATTTGAGATTTTTCTTATTTCCTGAGTGGAAAGAGTGGAACGAGAAAACCTTTCAGACTATTGTGTTCTGGGCCAGCGTCCAATGCATTTACCAAATATGAACCAGCTGGCCTCCCTGGGGAAAACCAACGAACAGTCTCCTCATAGCCAAATCCACCACAGTACTCCAATCCGAAACCAAGTGCCCGCATTACAGCCCATCATGAGCCCTGGTCTTCTTTCTCCCCAGCTCAGTCCACAACTTGTCAGGCAACAAATTGCCATGGCCCATCTGATCAACCAACAGATTGCCGTTAGCCGGCTTCTGGCTCACCAGCATCCTCAAGCCATCAACCAGCAGTTCTTGAACCACCCACCCATTCCCAGAGCAGTTAAGCCAGAGCCAACCAACTCCTCTGTGGAAGTATCTCCAGATATCTACCAGCAAGTCAGAGATGAGTTGAAGAGAGCCAGTGTGTCCCAAGCTGTCTTTGCAAGAGTGGCATTCAATCGCACACAGGGGTTGTTGTCTGAGATTCTGCGGAAGGAAGAAGACCCTCGGACAGCATCTCAGTCTCTTTTAGTAAACCTGAGAGCCATGCAGAATTTCCTCAACCTGCCTGAAGTGGAGCGGGACCGCATATACCAGGATGAGAGAGAGCGGAGCATGAACCCCAATGTGAGCATGGTCTCGTCAGCCTCCAGCAGTCCCAGCTCCTCCCGAACCCCTCAGGCCAAAACCTCGACACCGACAACAGACCTCCCCATTAAGGTGGACGGCGCCAACGTCAACATCACAGCTGCCATTTATGACGAGATCCAACAGGAGATGAAAAGGGCCAAGGTGTCTCAAGCCCTGTTTGCCAAAGTGGCTGCAAATAAAAGTCAGGGCTGGCTGTGTGAACTGCTCCGCTGGAAGGAGAACCCCAGCCCAGAAAACCGCACTCTCTGGGAGAACCTCTGTACCATCCGTCGTTTCTTGAACCTTCCCCAGCATGAGAGGGATGTGATTTATGAAGAGGAATCAAGGCACCATCACAGCGAGCGCATGCAGCACGTGGTTCAGCTTCCCCCGGAGCCAGTGCAGGTCCTTCACAGACAGCAGTCTCAGCCAGCCAAGGAGAGCTCTCCTCCCAGAGAAGAAGCACCCCCACCACCTCCTCCGACCGAAGACAGTTGTGCCAAAAAGCCTCGGTCTCGTACAAAGATCTCTTTGGAAGCCCTTGGTATCCTCCAAAGCTTCATTCATGATGTGGGCCTCTACCCTGATCAGGAAGCTATCCATACTCTTTCTGCTCAGCTGGATCTCCCCAAACACACCATCATCAAGTTCTTCCAGAACCAGCGGTACCACGTGAAACATCATGGGAAGCTCAAGGAACACCTGGGCTCGGCAGTAGATGTGGCCGAGTATAAGGACGAGGAGCTGCTGACGGAGTCAGAAGAGAATGACAGTGAGGAAGGCTCGGAGGAGATGTACAAAGTGGAGGCTGAGGAGGAGAATGCGGAAAAAAGTAAGGCCGCACCCGCTGAAATTGACCAGAGATAATGTGAACTCCAATCAGGCAAAGCAATACACCGGTCCAAGGATTTTCTGTTTTAGTTTCTCTGAAAACTTTTTTTTTTTGCCTTATTTTATTTTTGTCTTTTTTGGTCTTTTTGTTCTCCTTCCTTTTTTTTTTTTTTTGACATTTCTTTGTTGCACAGGATACACCTGTAGACTGAATAAGTTCAGTATTTCCGAATCAGACATCGCCTTGGCAAAGACACTAAAGTGTTATGCTTTACAATGGACTGGATCGTAGTCATTATAATCACAGGAGACTCTGCCTTCATTATCCTTGCACTTATGGAAGAGACACCAGGCAAGTTCCCAGATGAAAAGACCTATGAAATAAATGAAGGAAGCTACAAGTGTGTGTGTATATGTATATGTATATATCTATATATTTACATATATATATTAAATTGCATGGGACAGAGAACTTTACAATCCGAAAGAATAGACTGTGAAATGAGTTCTTAAAGAAGAGACTTGTTTATGTATTAAAAAAAAAACAAACCACTTCACAGTGAGTCGCTTTGGCTTTTTGATAAACTGCGGCCTGCTCTCAGGGTGGGGTGACTTATTTTTGAATTCCTATTTATTTTCTGTGTTTGTCCCTGATTTTTTTTTTTTTTTAATTCTATGGCTTCCTATCTGGCAGCTTGATGGGTAATTTTTGAGGTATGTATTTAACTAAATAAATCAACACTGCCAAAAAAAGTAAAAGAAAGAAAGAAGAATAAAGTGGAAAAAAAATCAGGGCACCTTAAAATGATACCAGTCACATTAATCTTAAAGACACAATGCACACTTAAATGACTCGATGTGTTCCGTTACTCAACTTGTTGTTACTGTAGTGAACAGGTGCATTTCTGTGGAATTCCAAACGAGTGAAGCTGAAATTCAGTGCAGAGAAAACTCGTTTATTAGTGCAGCCTCGATAAAATGACATTTTGACATCAGACAAATGGAATTCACAGTATGAGCCACATTTTATTGTGAAATTTATTTACCTGCTCGTGGCTTCAGATCTTAAAATTAATAAGCCTGCTCATTTTAACTTGTTTATTGTTGCTGTTTTCTTTTACTTTTCTTTTTTTTTTTTAAATAGAAAATAGTTCAATGTAATGTTAAGTTAGAAAAGAAGTTGCTGCCCAGGTAAAGGGGCTCCTTCTCAAATAAATCCCCGTCCCTCCAGCTCCCAAGAGATGTTTCTCATTTTTGTTTCACTTTGGGCGTCTTCTTCTTCGTATACATTCCATCCACTTAACCAGACATTTTTAGTCCTTGCTCTCATGCACCTCATCCCTTCCCTGCTATGGGAGCAGCCCTAACGAAAACCTGTTTTTAAATCATTGTGCAGCTCCAAGCAATAGAGTAAGCAAAGCAATTTCAGTGGAATCGCCTACTTGTCATAAACTGAAACATTTTCCCAGTCACCTACATAGCAGTTACCTTACGTAAAGCAGAACTAATGCCGACTGGCTGTTTAAGGGAATGAGCATTAAAGCTGCAATCTACTATAGTTCTCCCACCGCCTTTAGCTTCCCATCAGAAACCATTACTTCCCACTGCTACTTCTAGTCATTGCAAGAGGAGACCTCACCTTCAGGACTGGCCAATCGAACCTAACCCATTCAAGGTGGCCATCAAACAGTCCCACACAGTTGGATTTTTTTTAAGAGTTGTGCTCTCATGCAACCTTGTCAAAGACCTCATGCAATATCACTTTGAAAGTTATTTTCTGTTTACTACACAAACATTGTAATATAACTGTTAATACTATTTATATATTTGAAAGGTATAAAAGGTCGGAGTTAAAAAAAAAACCTCTATTTGTAGATATTAACTCAGAACTTACGATATACAGGGAGAAGACATGTTGCAATACAAGCTAATTCTAGCTGCTCAGTAACCTCTGGAGTTTTTAAAGGGACATTTTCCTGTACTTTTTCAAATAATGATGTTTAAAAAATGATCTTGACACGAGCGTTATATACCTTTGCAAAAGGATGGTGGTTTGCAGTCAAGCCTGGGCCCATCCTTCCTATTTCTGTAGTATGCTGCAGCTTTAATCAGAAAGTCCGTGGTTGCTGCTTCCTGATCTCCGAGTTACTCTTTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACACGTAATGGAAACTGATTTTGCCAAGCTCTTACAAGGTGGTTCATCTCTCGATGGCATCCGCATTTGGTATCTTTTACACTTCAACCAAAAATTTATTAGGTATTTTTCAATGCTAAGTCTTGCCTTTTATTTTTTAATTTCACTGCCAAGTTTGCAGTGGTTCTAAGTGAATCTGTGGGCATTTTAGCCTGTGGTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATTTATTCAATATCTGTCATATAATATCTATTTGGAAGAAGAAACTTTCTCTTGTAGTGCCTCTTGACAAAGCACAATTTCCTGCCCCACCCCTTTTTTTTTTGTGAAATGAAAAAACAAATTGTGTTTTATTGCGGTATCAACAATGTGAATAAGGATTAACATATTGTAAATGTTCTTTTTTCCATGTAAATCAACTATCTTTGTTATCACTAAGTGATAATTAATTTTTAACTTATGTGCATTGTTAGGCTGTTAGAATTTTTTGGTTGTTAAAATAAAACGCATTCAAAAAA EMBV3_26091 ACCTTAGTCACCCTGGGGTACATGAGCTCTTAATTCTCCCACCAGGGATCGAACCTGCAT Gene BVT0102_240730 + 0 NULL GK000001.2:143755848-143829674 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002417 TCONS_00002416 TCONS_00002418 1 XLOC_000600 NonCoding TCONS_00002417 XLOC_000600 NonCoding NonCoding - 1:143798235-143800742 - TSS1232 1978 1 TCONS_00002417_3 116 0.307381193124368 2 0.211492418196329 0.000288875954060278 1.24340203174818e-09 0.000450911858643853 1.89973210031472e-12 8.23623291712907e-05 1.18065409483699e-09 0.000203329861356225 1.95149719457614e-10 1.41037123870163e-09 5.30499869573115e-10 2.85159588435991e-10 0.000151843873094721 0 0 1.98844178419731e-08 0 0 0 0.000532289776575029 7.7218224791507e-05 5.4222347373995e-05 0 0 0 0.000139074696860501 0.00018488654493596 6.97048061941556e-05 0 6.2102085997454e-10 5.48091443528385e-05 XM_005200766.1 ZNF41 PREDICTED: Bos taurus zinc finger protein 41 (ZNF41), transcript 2e-25 122 78.03 0.0849342770475228 NR_038864.1 LOC401324 Homo sapiens uncharacterized LOC401324 (LOC401324), non-coding RNA. 4e-48 197 76.10 0.157735085945399 0 noncoding 0 0 0 0 -0.0674194661609243 0.563590061776063 -0.0562568611855091 0.306270156922464 CTGCAGTCCTCGTCGACCTTCCTTCTTTCACTGCTGGCTGTGAGGTATTGCAGCTGAAGGCAGAAGGAAGCTCAGCATCTGGGCATGCCCTTGTTCATTATGTGTCTCCTGCTGCAGTAGTTCGTGGGTGCAGGCTTGCCCAGCTGGCCCTGGTGGTGGCAGGAAGCAGAGACTCAGGGAAGCAAGCTGCAGCCAAGTAGGTGGTAAATGATGAAGCCGGACCCTGCTGGAACTTTGAGGCTCAAGACCTGGCTCTGGTTCTGTTTGGGGACAATGGCTCTTCTTGGGACAACTGTGCACTTGCAGGAGGGTAGGTGCCCTGGCCAGGCCCACAGTTCCATCCGTGAGCTCTTGTCCTGCCCCTAAGAACCAAGAACATCATTTGTCAGATGGCTAACAAGGGCCATGTGTTGCCTTGGGATCCATTTGGTTAAGGCTCAAACATATAAGTCCCATGTAATTCATTCCTTTTGTCAAGGACTCCCAGTCCACCTTTTGTATCCTGTTCCATTCCCCACCCCACCCAGTCTGCTTCAGCCTGGGGGTTTTTCTGGGCATCTGGTTCCGGTCTTGGCTCACACCACATGCCCCTGGGCTATGGTTTTGATTCCCGGAATAGGCTTCTTCAAGATCTGGCAGTCCCCTGCATGGGAGGTAACCGTGAAGAAATGGACAAAATTCCATCATCACACAGATTCTGTGTACCTGCTGTGGCCTGAAGGTTTGAGTCCCCCACCCCTCAAGTTCACATGTTGAAATCTTAATGCCTGATGTGATGATGGTCTTGGGAGGTGGGGACTTGGATAATTGATTAGGTCATGAGGTTGAAGTCCTCATGAGCAGGATCAGGGCTCTTATAAAAGAGACCCCAGAGAGCTCCCTGCCCCTTCTTCCATGTGAGGACCCAGCAAGAAGGCACCATCTGTGAACCAGGAAGAGACTCTCAGCAGACACCGAACCTCCCACAGCCTTGATCTTGGACTTCCAGCCTCCAGAAGCATGAGAAACAAATGTCTGTTGTATCTTAGCTGCCTGGTCTCTGGTGTTTCAGTTGCTTGAACTAAGAAGTTATCTATTTATATTGTATATATTTTCAGCTTGGGCCGCTTCTTGGTGGGAGGGAGAAGAAATTGATTTCACAGGTTGACAATCTATTGCATAAAGCAGTGCTATTTTCTTATTTCCCTCTTTCTGATGGTGTGGAGCTCCTCTTGGGTATGGGGCTTGGGATTAGTATAAACACATCTGAGCCCAGCCTTTCTCTGGTTCAGCCACCAGCTTTGACTGCCATCATGAGCTGTCGTCCCCAGCATTGGCCCCACCCAGCACCTCTGGTTCTGTTCAGTTCTGGTCTCGTCTCGTCAGCCAGGTGACCACAGGGCAGGAGGGAGCAGACCCCTCTTCTGTCCACTTTGGGTAGTCACCAGGCTTCCCTGGGGCTTCTGAGGTCTTGGCTTTGCTTGATTCAGTGCTTGTGAGTGCGTAGGCCCCCTTTGGGGCTGGGTGGGCAGGGGCAGTGAGAGGGGGCTGTGGACAGAGTGAAGAAAATGCCCCCGAAGCAGATGCCTTGACCTTGACTCCTCAGTCCTCCAAGTCCTGGGACTGGCCAGTAAGTCACTTGCCAACCGCACTTAGACCCTTAGCTAAATCTCATGTGGGAGATTCCATCTAAATGATGTAGGTACGTGTTTATGTCTCTGTGTGCAGTATTACTATGAATTTTCCACCTTAAGACTTTCAAAGGGCTTTCCTGGTGGTCCAGTGCTTAAGAATCCACCTGCCAATGTGGGGGATGCAGGTTCGATCCCTGGTGGGAGAATTAAGAGCTCATGTACCCCAGGGTGACTAAGGTCTCACCCTGCAACTGCTGAGCCCTTGCAGCAAAATTAAAAAAAAAAAAAAAGATTTTCAAGACCTAGGGATCTGAAGCATCCTTGTTTTCACTATCCTTCCCCTCCCCAAGCCTTGCCCACCCACC TCONS_00002419 s 5' 28933 TCONS_00002419 s 5' 31439 EMBV3_35244 AGGGCTCGACAGGCATTAGGAATTTTCTAGATATGCTCAGCCTAACACAAGGAGGTTGAC Gene BVV0102_144030 + 1 EMBV3_06261 GK000010.2:81577274-81593973 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014965 TCONS_00014967 1 XLOC_008397 Coding TCONS_00014967 XLOC_008397 Coding Coding SLC39A9 10:81533906-81579142 j TSS10679 5065 1 TCONS_00014967_5 313 8 0.888206035149773 7.21804784331917e-05 0.000365097847246905 0.000331603592698029 7.33818872958354e-05 0.000274828652951026 9.07580674331627e-05 0.000211640599273728 7.9106914135474e-05 0.000328075381036293 0.000294498146698239 0.000298779132637653 0.00012395176308138 6.99494947601824e-05 0.000138179824533021 6.16647374585242e-06 0.00297677938308518 0.00148368115078953 0.00278408527372749 0.000378879504638024 0.000475422590465641 4.40634364376953e-05 0.00073704388184124 1.29146279724351e-18 0.00159733394576227 0.00027753262407605 0.000569775325343792 0.00010514527163384 0.00040553835225968 0.000643606085994262 4.36450922242443e-08 XM_005212025.1 zinc transporter PREDICTED: Bos taurus solute carrier family 39 (zinc transporter), 0.0 8031 99.93 0.880552813425469 NM_018375.4 SLC39A9 Homo sapiens solute carrier family 39, member 9 (SLC39A9), 0.0 4327 79.83 0.951036525172754 TCONS_00014967_5 sp|Q9NUM3|S39A9_HUMAN S39A9_HUMAN Zinc transporter ZIP9; 0.0 581 95.44 0.977635782747604 1 coding 1 1 1 1 -0.0635864222858574 0.637725097847324 0.0228143597210235 0.682030059243722 CTTGGCGGCCATGGCAGCTGTAGTATCGGTGGCTCCGGGTCAAGGCCCCTCGGAGTGGAGTAACATGGGCAGCACTGGGTATAGGGTAGAGACAGCTTTGTATCAGCTTCACTGCTGAACTCCACTACCCGCCATTACCGGCCTGCAGGACTCCTTTCCCCACTCTAGACTTGGAGGAGAGTTTGCCGTGATTGGTACGTTCAAGAGAGAAGTGCCTCGTGAACGCATCTGCCGGTGGGGAGGACGAGAACTGGAAAGTCCACCTGTTCTCTTGGAACAATCACACGTGTTTAAGGACCCGAGCTCCCGAAAAATTATAGACTAGTGGTATTGGATGAATAAAGGAAGCAGAATGGATGATTTCATCTCCATTAGCCTGCTGTCTCTGGCTATGCTGGTGGGATGTTACGTGGCTGGAATCATTCCTTTGGCTGTTAATTTCTCGGAGGAGCGACTAAAGCTGGTGACTGTTTTGGGTGCCGGCCTCCTCTGTGGAACTGCACTGGCGGTCATCGTGCCTGAAGGGGTGCACGCACTTTATGAAGATATTCTTGAGGGGAAGCACCACCAAGCGAGTCAAACACAGAACGTGATTGCATCAGACAAAGCAGCGGTAATACCGGTTGCCCATGAACATGAGCACAGCCATGACCACACACAGCTGCATGCCTACATCGGCGTTTCCCTCGTACTGGGCTTTGTTTTCATGTTGTTGGTGGACCAGATTGGCAGCTCCCATGTGCATTCTACTGACGATCCAGAAACAGCAAGGCCCAGCAATTCCAAAATCACCACCACGCTGGGTCTGGTCGTCCATGCTGCAGCTGACGGTGTTGCTTTGGGAGCAGCAGCTTCTACTTCACAAACTAGTGTCCAGTTAATTGTGTTTGTGGCAATAATGCTACATAAGGCACCAGCTGCTTTTGGGTTAGTTTCCTTCTTAATGCATGCGGGCCTCGAGCGGAATCGCATCAGAAAGCACTTACTCGTCTTCGCACTGGCAGCACCAGTCATGTCCATGGTGACTTACTTAGGACTAAGTAAGAGCAGTAAAGAAGCCCTTTCAGAGGTCAATGCCACTGGAGTGGCCATGCTTTTCTCTGCCGGGACCTTTCTTTATGTGGCCACAGTTCATGTCCTCCCTGAGGTGGGCGGAGTGGGGCACAGCCACAAACCCGACCCCGCTGGAGGGAGAGGCCTCAGCCGCCTGGAGGTGGCAGCCCTGGTTCTGGGTTGCCTCATCCCCCTCGTTCTGTCAATAGGACATCAGCATTAACTGGTGAGGGTCCAGCCTCGGTCCACGGCCGTTCGCCATTCAGTGAGAACAGCCGGCACATGACAGACACTCACTTCCTCAGCCTCTTGTCTCGCCTTGCCCATCTCCACCTGTATTCCTAAAGAGTCCAGAGGGAGGTGAGAAGAAAACCTGGAGTAATGGAAAGCTTTCAAGTAGAAACAGCACACTGCGAAGGATACAGACATTCCGTTGTGTTGTCTTTTCAAGGGCCCTTGGCATTCTGAGTTTTGGTGTTTCCCTTAACCCTATTCTCAGGGAAGATGGAATTTAGTTTTAAGGAAAAGTGGAGAACTTCCTACTCATAATGAAATAATTATGAAAGTACAGTATTCTGTAATTAAGCTAAATCTCTTAGTTTAGAGGCTCTGCCACTGTATCCATTGATTTTTTAACATGGTTCTCACCGTGTACGACTGGTGCTTTAGCATCTATGCCACTTGCCTTGAATGAAGGTCATGATGCCCATTGTGTTAGATGCTAAAGATAAGTAGTTCATCTGGGGCTAGAGTCGAGAAAATGATGGCAAGACACATTGAAAACTGACTTTACACTTGAGAGATCCGGTGAAGTGGGGACATCTGGGGGACTGAAACACCCCCTTGAGCACGCGCCTCTTGACAGAGAGCTTGCCTTCCATCAGGTGGGGCAGCAGAGGTGGACTAGCTTTAAAGAGGTGACGCGTTTTATAAAACATTTCTTTTCAAGTCCTCGTTTGTATAGAGGAGCCAAGTTCTAGTAGGTTCAGACCAACCTAGGCTTCCCTTCTGTGTTCTAAGAACAGTCAGATCCCAAAGTATCTTTGGAAATTAAGGGGTGTTAAATTTTAAGTGAATTTGAACAGTTACTGACATCTTTGTAGTAACCTTTTTAGAAGAAAGATCTCCCAAACCTACTTGTCCTTTTTTTGTCTCTTAAGTATTTATCTTGGTAGACCAGCAGTCCCTCTGGCAAAATACTCAGTGCCCCTTCGGGACTGCCAGGTCAGCATCACGCAAGCACCTGTAGCAGGGAAGAAAGTCAAGATATATCACAAATGGGAGGTGTTTGCCTGTTGATTTAAAGCTTATTAAAATCATGTCTTTTGTCTCTTCATCTTTTCTGTATTTTATTCCTAACTTTTCCCTCTAGCCCTTCCTCCCTACAATTTGCTGCTTACTGCTGGTGGTGATGCTAATATTTGTGTGAGTTAAGTTCTCATCAGGACAGCCTCTTCTTGGAACTGTGATGATACAGATAATATTGTTTCTGTCCTCTGTTCCTTTCAATGAAGTTACCTTTGTGTCAATTGCAGCTTTGTTAAGCCCTTAAAATGTCAACTTCCTCGTATGTGAGATGATACAATCACTGATATTCTGGTAATTTAAACAATTGAGATATTAAAAATAGTAAGCAAACTAGGATAATTTGCCCATATTTGCCAAAAATCCCTGTTAACCTTGTGTTATCAAATAAGTGTATAATATTATATTGTTAATTTATTTTGATTTTCTGTACCATTTCAAAACACATTTCATAAAGTGGGAACCAAGACTATTTTTGTCAGGGCGTTGGATTTAGGAGTTTTTGAAACATTTTGTATAATGCATAGACCAGCATGCCCAGGATTTCTGTATTTCTTCCTAGATGTGTCACTGGGTCAGCAGCTGTGGAAAGAGAACTTGTGAGCCCTCTGCTGGCTAGACCAAAGTAGCATAAACAGGATCTGGTTTTGGATAGTGGCTGGGAACCGTTGAGAACAGCATAAAAACCAACAGAAGGTGCAGCAGGAAAGTCTAGGTGACTTTCCTGCTAACAGCTGGGACTTCAGAGAGTCATGGGGTTTCACCCAGTCCTTCAAAATGACATGGTTGCCTTGATTCTCCCTGGAAATGTACTTTGTTAAATAAATAGCTCATTTTAGTGTCTGGTCTGGTTTGAATAGTGGCACTTTTCTATCATATTGTTGTGCAATGATCTGAAATTTGTTCTGCTGGCCAAAGCCTCTTTCTGCAGTGCCTTGCCATCACACTTAAAAGTTGGGCTAGAATATCTTGCCGGGTAGGGCCTTGAACTCTGGCAAGGGCAGAACCAACCTCCAAATTGGTTGTCCCCTCTGGACCCCACATTAACAAGCAAACCTTTCAAGGCCTATCAGCTCTCAAGAGCTGTGGGCTGTCCAAGATTTTAAAACTGCTACCCCAGGAACCACTCATTTCCCTCCTGGTCAGCAGGCAGAAATAGCCATACTAATCGTACAGGGCTCTAACGCATCTCCAGGCAGCAGGTACTGAGCGGCGTGCAGGGCCTCCTTCATTTGTGGGGGGCGGGGGAGAACTTATGTGGGCAGTGTCCAGGAGAGCCACACTGATGTCACTTACGGGCACATTTCAGCTCCATTTTCCTCTTGATGAAAACTGCCTCCTTTAGATGTGGATGCTTTATGCTCTCACGCGTTTGGAAACCTTGGCAATACTTCAGTCGCTGCTGTGATTACAGATGGAATTATTGGCTACCAAAGAGATGCAATTGATGATGAAAAGCATTGTCCTTCCTTCTTCATAACCAAAGTTAATCTTAATTACAATTTGACTCCCTTTCCTTGGTACAGATAGACTTTCTTCAGATGTTGAGTGCTGTCTTAAATGGCAAATTAAAGTGAAAATTATACTCATCCATTCCCTTCATTTGTTCGCCAGTGAATTGCTTTTGTCAGTTGCCGTATCCCCAAAGCAGCCATCTTCCAGGTATGATGGCTTTCCTGTGCACGCTGTTGCCAGATTTCAGTTCTTCAGGTGAATTCTGCCCTGGAGTGCAGAGTGTTGAAACACCACCAGAGGCTCTGTGTTGTCCCTTTCCCTCTTCACCTTTTTATTTCCCTATTCAAAACAGCCAAATCTGTTCCTATATTTTGAATCATTAGAAAAATGAGAGAGGTGGCTGTTTTGAGTGGTCAGTTCTTTGTAGAAAGAAGAAAATGTAATGGTGTTTTTTACTGGCCTGCTTTTAAGTGTCACTGCCTGGTTTTTCCTCTTTTTCAAGGATTAGAACTAGGAGGACATGCCAGCCCCTCAGATACGTGGTAGCCAGGTACTGAACATGGGAACTGTGTGTATGTCAACAGCACAAGCCCCCAAAGCATGTTCCTGCCTTTGGGGCCCCTGAGCCCCATGGGAGACTGAGAATGACCAGATTTATCCAGAACTGCTGTAGGGCAAGGTGAGAACCCTCTAATAGTGTTCCACAGGGGTACCCTCCTTGCATTACAGGATTTTTTGCTCAACACAGAATGGTCCACATTACCCAAAGAGCACTGTTTGAGATGCTATGAAATTAAAACCAGTCATGTAGCCCCTTTGTACCTGAGACGTCTAGATTCACCTGAGAAGACCTGAGGGAAATGTATGACTTGCATGAAAGGGCTCGACAGGCATTAGGAATTTTCTAGATATGCTCAGCCTAACACAAGGAGGTTGACTTTGATCTGTTTTCTCATAGCATCTTCTACTAAGTGAGAAATCTCATGGGCTAACACTGCAGTCCCCCTGGTTTGGTAGCCTAAATGGTGATTTTAAATGTCCCCTTTTTCTGGATCCTTTGTAAACATGAAATCATTCCACGGATGGCTGCCTTATAATTTTTGTCTCTTTCCACTTTAATTGTGAATGGTTAAAAAAGATGTTTTTGCTGTTTTCTGATTTGTTTTATGATATTAAATTTTTATTAGTGCATACCATATGTGAGTGGCTCATTATTGATCCTCTCGGCAGTTTTTCCATTTGGTGACCAGAC EMBV3_11905 GTCAGATAGGAGCCCCTCCTCTTGCTGATAATGACTTTGGAAAGCTTGATGCCCGTTCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22511 GGATCACAGAGCTTAGTGTTAAAGTGTACATTTTGGGACTTGTGATGTAGGTCTTGTCTC Gene BVV0102_318869 + 0 NULL GK000007.2:71621747-71798827 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01265 AAGCGTGAGGACCTCTTCATCGTCAGCAAGAGCTGGTGGACGAAGGGCTGGTGAAAGCTA Variant GeneID:317748|AKR1B1:NM_001012519:5_cdna 261^465 1 EMBV3_37703 GeneID:317748 4 GENE AKR1B1 MGC134297 aldo-keto reductase family 1, member B1 (aldose reductase) EMBV3_34301 AAATGCCACAGGAAAAGAGCCCTGGATACAGCTAGAACGCAGTATTTCACCCACCAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30561 GCCAATATACTGTCCCATGCCTACTGCCTTCATCCAGATCTCATCCACCTTCCCTGTGGT Gene GeneID:530994|LOC530994:XM_002693213:420_cdna Constitutive 0 NULL GeneID:530994 15 GENE LOC530994 NULL similar to olfactory receptor Olr145 EMBV3_05185 CCGTCTGTGTGCCCTGATGGCTTCTGCTTCGTGGGTCACTGGTTTTGCTATCTCCTTATT Gene GeneID:529518|LOC529518:XM_002697451:54_cdna Constitutive 0 NULL GeneID:529518 23 GENE LOC529518 NULL similar to hCG1805526 EMBV3_38293 TTTTAATGTCCAGCTTCCTGTCATTTGGGAAGGCAATCACCGCAGAAGGAGGTAGAGCGC Gene GeneID:282322|PRKACA:NM_174584:4_cdna Constitutive 0 NULL GeneID:282322 7 GENE PRKACA NULL protein kinase, cAMP-dependent, catalytic, alpha EMBV3_14653 ATCTGGTGTGGCCCAGAAAGTTACTCAAGACCAGTCAGATGTATCCAGCCAAGTGGGGCA Gene GeneID:616529|LOC616529:XM_002690576:255_cdna Constitutive 0 NULL GeneID:616529 10 GENE LOC616529 NULL similar to TRD@ protein EMBV3_19048 ATTTTGATGCAACTGCAAGCCGACATTCTGTATATCCCGGTAGTGAAGCCCTCGATGCCG Gene GeneID:538702|GK:NM_001046437:145_cdna Constitutive 0 NULL GeneID:538702 2 GENE GK MGC133831 glycerol kinase EMBV3_24659 GGCGGCGCTATCTACGGGGTCGCTTTCTGGGGAAAGCTCTCACGGAGCCCGAGGCCCGCT Variant GeneID:538238|PLK1:NM_001038173:371_cdna 247^501 2 EMBV3_00722 GeneID:538238 25 GENE PLK1 MGC133927 polo-like kinase 1 (Drosophila) EMBV3_00772 GTCCTTGCTCGGAGAGTGCGGCCTGATGGCTCTGTGCAGTACCTGGTTGAGTGGGGAGGT Gene GeneID:508957|PHF1:NM_001098914:95_cdna Constitutive 0 NULL GeneID:508957 23 GENE PHF1 MGC166079 PHD finger protein 1 EMBV3_13707 GCTGCGGGGAGGCGCTTGATTACTCTTGTAACCAGATTCAGTCCTCATCTGAGCTGTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37505 AATTATTCGGTTCCAAAACACCAAACTTGTACTGCACACGGTCCCCATGGAAAGGCCCCC Gene BVT0101_004249 + 0 NULL GK000003.2:25395823-25400615 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29711 GTGGCCCAGCCAGTGACAGCCTCCCCGCAGGTCCAGCCGGCGCAGCACGTGTACCCCGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17804 GCCTCAATAAAGTTAGACTGGATAAAACACAGAGGGCAACCGTAGAGAAGGAAGCATTCA Gene BVT0102_373205 - 1 EMBV3_29294 GK000006.2:107014452-107195795 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210700 1 XLOC_129210 NonCoding TCONS_00210700 XLOC_129210 NonCoding NonCoding NSG1 6:107019442-107021372 i TSS158207 1930 2 TCONS_00210700_2 72 0.630569948186529 1 0 0 0 0 0 0 0 0 0 0 1.49230314572276e-05 1.18610656078223e-06 0 6.54136094799735e-05 1.21865445859657e-05 4.57573265699439e-05 0.00016421693486332 0.000524736601780206 0.00028601016121071 0 8.5700939068151e-05 0 0 9.50678880921964e-06 0.000173726923331467 0 0 0 0 1.0061353913947e-05 0.000361358200757781 XM_005218896.1 ZNF570 PREDICTED: Bos taurus zinc finger protein 570 (ZNF570), transcript 5e-128 462 75.57 0.301036269430052 XR_247912.1 LOC101929140 PREDICTED: Homo sapiens uncharacterized LOC101929140 (LOC101929140), misc_RNA. 3e-10 71.6 70.17 0.089119170984456 0 noncoding GGAAACTGAACTCTCTCGATAGCTGGGGGAGCCTGGCACGCGGGGCGTCCCTGGCCTCGGGTGAGAACCTGGTCTCAGCTGACGCTGTAATTTCAGCCTCCGGATCATGAGCAAGGAGTCTGCTGGCCTGCACCTGACTCTTGGCCCATGGAACCTGAGATAGTAAATGTGTGTTGCCCTTAGCTGGTAAATTCGTGGTGCTTTGTCATGCAGCGTAGATAATGAAGGCACCTGCATACCTGATTCGTTTTGGTGGAGGAGCAGTGATGTGTCCAGGAAAGACGGACGCTCTTCCCCAATGGCTGCAGAGAGGTCACACGACCCGGCCTCAGCCCCTGAGACCTCCCTGATGACAGGCAAGAAACATACCAGAAGACTCACTGCCTTCCTTCCTGTTTGGTCATGGATGTGTGATGACGTGACACCTGGAGCTGCAGCCGCTCTCTTGGGGCCAGGAGGAGATGATGCCAACAGTCACGGGGGAAAGACTCTGTATCCCCAGTGCTGTTGTTCTTGAGCCTCCAAATGAACCCACCCTGGAGCCAGCCTTTGGTCAGGCTTCCTGCCAATGGAGACGCTAAGTAGCCTCACTGTCTAAGGCCCTTTGGGAGGAGGGTTCCATAATGTGTCACGGAACGCATCCTAGCTGATTTGCTGTACACAACCCTGTCCTGCCTCCTTTGAGAATTACTGTGCAAGTAGGCAAAATAACACTCAAAAGCATCCACACCCTCCTCTCCAGAGCCTGTGGCTAAGTGACCAAAAGGGATTTTGCTGATGAGATTAAGTTAGGGACTTAATTAAATTAGGGAGATGAGGGATTATCCTATATTATCTGAACAATCCCTACACATTGTCACATCATCACGAGGGTCCTTCTAAGTGAAAGAGAGGTGATCACGGAGGCAGAGGGATGGGAGGAGGGCCACGAGCTCAGAGATGCAGAAGCAGGAGGAGACGAGGAAACACGATTCTCCCCAGAGGCTCCAGAGGTAACCAGCACTGCCAGGCACTTCATTCTTCTGGACGCCAGAGCTGTGCAATAATCAGTGTGTTGTTACAAGCTCCTAAGTTTGCGGTCATTTGTTATAGCAGCAATGGGAAGTGAATACACACTCTGTGGGTGTTTGGAAATGAATGGACGCGTGCAGTAGTCACAATGGAACTTTGTAAATTATCGGATTAAACACAAGGAATGTGGTCCTCCTGTGGTGTGACAAGTCCCCTGTCCTTCCTGAGCCTCGTGTCCCCAGCTCTGAGTTGAGGGATGGGACTCTGGGCTTCCTGGGCACTAGGAGGGCCTTGTCGGGGCTGGGATAGTCTGACAGAAGGAGATCAGAATGCCTTCCTTGTTACGGCTTCTTAGCCCTCATTTAAAAGCAGACATTTCATTTCCAGATGCATGGGAGTTTTTAAAGTATCTTTGATATTAATTTCTCATTTGAATGCTTCCTTCTCTACAGTTACCCTCTGTGTTTTATCCAGTCTAACTTTATTGAGGCTTTCTTGATGGCTAAGTCAGAGTTCTCTCTTGGTAAATAACACACTGCGCTTGAAAATATGTGGGTTATTTTCAAATATCTTTTGATTTCGGAATTGCACAGTAATAAGAGAAAAGCTGCGTTATGATTTCAATACCTTTAGACCATGAAATTTCTGCACCTGGTCTTACGTTTCCAGATATGTTCTAGTGTCTCCTGGTTTAGTCTATGGGAACATGAATTGGTATCCTACTGTTGTGTGAAAATGGTATAAATCTTAATTATGTCAAATTGTTTCACGATGCTTTTCAGGTCTACTATATTCTTCTACTTCTCTGTACATTTATTCTATTAATTTCTGAGAGTTTGATATTGAAACTCCAACTAAGAATTTAATTGTAATATATAGTGGAACTATATGTAACTTTGTTCTGTATTTTCCAAGTGAA TCONS_00206120 TCONS_00206121 . 5' 147311 TCONS_00206120 TCONS_00206121 . 5' 147311 EMBV3_21488 GTTCAGGAACGTCGTGACGCAACTGGAAGCTGACTTGGACATTACAAAGAGACAGCTAGG Gene GeneID:536433|TSGA10:XM_002691170:240_cdna Constitutive 0 NULL GeneID:536433 11 GENE TSGA10 NULL testis specific, 10 EMBV3_25129 CAGGAAACTAGACTGGAGTCTCACTTCTTTCCCAGACCGGAACTCTTGGGAGCTGTAATC Gene BVT0102_025045 + 0 NULL GK000010.2:26815096-26830646 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013266 TCONS_00013262 TCONS_00013269 TCONS_00013267 TCONS_00013265 TCONS_00013270 TCONS_00013264 TCONS_00013268 TCONS_00013263 1 XLOC_008048 Coding TCONS_00013262 XLOC_008048 Coding Coding - 10:26814162-26825078 - TSS9870 1627 3 TCONS_00013262_5 70 0.116164720344192 5 0.851397159871736 0.000372017458935412 8.56930841747638e-08 0.00113284363303374 0.000683384256052367 0.000753981960995434 4.24139341727772e-07 8.56503335648087e-05 0.000179569181347323 0.000547998692861446 0.000303036616454859 5.199474758647e-05 0.00039900451915409 1.83231862020187e-05 2.45751259859434e-05 0.000207225721345163 0.00494231297689417 0.000657293278376521 0.00237870455820529 0.000316870898185829 0.000337675516021601 2.21940021467923e-05 0.000181315243697763 0.00217989882283952 1.30376450580811e-14 0.000284868479489876 9.52637322834695e-05 0.000492337841933305 0.000290611656396684 0.000419538517372845 0.000411448176611541 XR_236075.1 LOC101906477 PREDICTED: Bos taurus uncharacterized LOC101906477 (LOC101906477), 0.0 1288 100.00 0.438229870928089 NR_002312.1 RPPH1 Homo sapiens ribonuclease P RNA component H1 (RPPH1), RNase P RNA. 3e-131 473 92.04 0.205285802089736 0 coding 0 0 0 0 0.0257964702026186 0.813920941113964 -0.0257008852749653 0.622446529674409 TCCACTGTCTTTTTGAGAAGTCACCGTAACCGAAAAGTGGCTCTAGGTATGAGCACATTATAAGTGCTATTTGCGTGCGGTGTTTGCCGTAGGGCGGAGGGAAGCTCATCAGTGGGGCTACGAGCTGAGTGCGCTTAGTCACTCTGTCCATTGTCCCTTGGGAAGGTCTGAGACTAGGGCCATAGGGCGGCCCTAACAGGGCCCTCCCTGAGCTTCGGGGAGGTGAGTTCCCAGAGAACGGGGCTCCGCGCGAGGGCAGACTGGGCAGGAGATGCTATGGACCCCGCCCTCGCGGAGGGGCCTGGCGGATGCCTCCTTAGCCGGAGCTTGGAATAGACTCACGGCCGGCGAAGTGAGTTCAATGGCTGAGGTGAGGTACCCCGCCTGGGGGCCTCATAACCCAATTCAGACTACTCTCCCGCCCGTCCTTTTTTAATGAAATGCTGAAGCTATGAGAATGGTAATGAACTATGGAGGCCAAGTGAATTTTAGAACGGGTAATTTTTTAGATGGGTGGAGGCGCGCGGGATATCCCAGAAGCTCCATTTCAGACACTGAATTAAAACTCATTTTCTGCGTTTTTAACAACAACCAAGTATTGGTGACTTTCATACAGATTTTTATCCCCCCCCCCTTTTTTTTTTGAAGTTTTGAAAACTTTTATTTTATATACAAAGAGCTAGTAGTATTTCCGCCTAAGGTTGATGTGCTGGATGAGCCATCTAAGGAAGTTCGGTTAGTCCAACTTAATGAAGCCGATGTCCTTCGCATACTGGCGGAAACACTGGCGGCACATATTGAGGCCGTATTTCCGGATCAGACGGTGCCGGTTTGAGCAGACCCGGCAAGAGCGAGAACCCTGGCCGAATTTTCTTGGATGGCTCCAGTAGAGCTGCTGGTGACCCATGTTGCTTTCTTGGCTGCAACGAGGCTAGAAGCCCAAGATGAAGGTGATGGCAGCATGGATTTCTCTAAGGCCTTTCTTCTTGGATTGCAGGTTGAAGATGGAATCTACTGAGGAAGGAAAGCCTAGGTCTTCAGCACCACATGTGCCAGCCCAGAAGCAGCAGTGTGAAAACCTCTATAACATCTGGAGTCCCCTAAAAATTAAGGAGACTTTGATTTGGACATTCTCAGTAGGAATGGTTAAAGGCTAATGGGACCATAGAGAGATGTCAGATGCTTGATAGATCCTGTAGTTCAACTTGATTCCTAGAGAGAAGCTGTTCATATGATATCAGAAAAATGAAATTTCAGGAAACTAGACTGGAGTCTCACTTCTTTCCCAGACCGGAACTCTTGGGAGCTGTAATCCTGGATATACAGTAAATAATAATAGCGTTTTTGTTTTATGGTAAGGCTTATGTTGAAATTGAAAAGCTTTGATATACATATGAATCTGTGGAAACAGCTTAGTGACTTCATAGCTAGCTTTTAAGGTGCTACAAATTTTATTTTTTAAAAAGTCAACTGAAGATGTTGAAAGGTGGCATAGCATAGTAGCTATACATGGCTTCTGAAGTCAGACTTGGTTCAAACCCACTCTCTATCACTTAATCAGCTATGTAACCCTGGCAAGTTTCTTAATATCTCAATGTCGTAGGGTCTTTATATCTTAAAAGGTGAT TCONS_00016555 r 5' 103 TCONS_00016555 r 5' 103 EMBV3_22079 GAAGAGCTATGACCGTACCAGACGTCAGCGTCGTAGGAACTGGAAACTAAAAGAGCTTGC Gene GeneID:509871|NMD3:NM_001075420:121_cdna UTR3_Alt 3 NULL GeneID:509871 1 GENE NMD3 MGC142487 NMD3 homolog (S. cerevisiae) EMBV3_01929 TTTGTACCATAAACACTTGGAACAAGCAAAGCCCATAAGTACCACTTAGCAGCTGTAGCC Gene BVV0102_053267 + 0 NULL GK000030.2:63348259-63496788 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251439 1 XLOC_154380 NonCoding TCONS_00251439 XLOC_154380 NonCoding NonCoding - X:63495285-63497302 - TSS188660 2017 2 TCONS_00251439_2 88 0.0198314328210213 1 0 0 0.000249092743419842 4.58800421606332e-05 2.8819576269359e-05 2.44778303724151e-06 1.41876351887624e-05 1.73476458193461e-05 0 3.9118114056221e-05 0 0 3.54554718687814e-06 0 0 0 1.30945014033201e-05 0 0 0.00011376783397808 1.78270552393273e-05 0 0 0.000231965733697606 0.000157921812909911 8.93111249809755e-05 2.09581632357713e-05 8.71465273286993e-05 0 0 5.66349502568034e-05 XM_592894.6 CHRDL1 PREDICTED: Bos taurus chordin-like 1 (CHRDL1), mRNA. 0.0 3636 100.00 0.999008428358949 NM_001143983.2 CHRDL1 Homo sapiens chordin-like 1 (CHRDL1), transcript variant 4, mRNA. 8e-177 625 84.27 0.281606346058503 0 noncoding 0 0 0 0 0.1318091262063 0.422214139611051 0.000530303808150265 0.993443463004159 ATTTTTCCAAATGAACTTTTTATTAATTTAAAAATCCAGAAATACAGTGACTACATAAATAAGTACCCTATTTAGGTACATGTCCTGTGAGAAGAGTGAAAGGGTAATACTGTTATGTTATTCTTACTTGTTTACATGAGTGAACTAGAAAATGGCTACAGCTGCTAAGTGGTACTTATGGGCTTTGCTTGTTCCAAGTGTTTATGGTACAAATAAATACACAAGAAGAACCACATCCATTCCTCTCTACTAAGTACAGGCGGCTCGGCCTCTTCTCTCTCTCTGCAACACTCAACATTGGAGGGTTTCTACATTGGCCTCGCCCAGCACCCCAGCTCCTGCTTCACACGGCGCCTGGCCAAGGTGTGTCCCGGCGCCTGCAGGCAACAGTCTATCTAGGGAAGCTCCCTGGGTGTTCCCTTCAGGTTGAGCTTTCAGAGAACACCTGGGTGGGAAGGTTTTGGGGCTGAGTCATCAGAAGGGGAATCACCACTGACTTAGGATCCAATGACTTGTTTCCATGCTATGGAAATACTGCCACCTCTGGGTGGGAGACAGCAGCTGCTTAATGTTCAACCCCCCCACCCCCACCACTAATACTCTGAATGTCCTCCTTCCTTCCCCTCCCCTCTTCGAGAACAATGTGTCTGAGAGGCTGGTCCCCTGAAGGCCTGGCCACCAGGCCTCTGTGTCTCTTTGATGAGAACAGACTCCTTTATGCCAGGTTGCCATAAAGACTGGACCTTTTACATTTTTCCCTATTGGTGTCAAATAACAAAAAAATGTTCATCTTACCTATGGTCACAGAGTAGGAAAAATGGGATTTCTTGGTCCTTAATATTTAAGTATTCACTAGAGTTCGTCCAGGCCCCCCTGAGGAGATAAACCTAGAGAGCAGGTTTGAGATTCCTACTGTGGAGAATTTATAGTTTTCCCTCAGAATGGATCACTTGGGCTCTGGTATTAGGCTGCAAAGAGACATTTTTGGAGCAGCCCTCACTGGGATCCATGATTCAGGTTCATGCTTGGTGCATGAGAGGAGAATGGTAGGAGGGCTTAGGATAAGGATTGGTATCAGAATCCCCATTTCCCCCAGTGAGCGATAATTCTCCTAACTGAAGCTTGGGAGGACGGAGTCCCTTTGCCAAGTAAAAACCAACTCCTGTAATTGGAGAAGAGAAACTGCCCTTTTAAGAAGCTTCTAGAATTTCATCATTTAACCAAAATTTTTGGACTAGAGAACTATGACTTCAGGACAGTAAATGAGGATTGAGCTGTTAATTGGTGAGTTTTGTCAACTTGAAAACACATGGCTGACCTTGCTGACTTCTAGCAACTCTTTCCTTAAATAATTATTTTCTTTTATGTAGACTCAGTTTCTAAAAGTTTTACTCAATTCTAACTTCTTTATGGAGGTTTAGGGTGAAAAGAGAAGTGGTGCCATAAGGTAAAAGTTCTTTTCCACCTCAGAGTGAAGGCAGCCATGAAATGGTGTTCTTATTCTTTCCCAGAATCGGTGCCATCAACAACCACATCATAGACCCAGGGCACAGCCTTCTGCTCACAACTGCTTATTTATCCTCCTGGGTGCCAACTGCCTCCAAGTTACTTAGGAGTCAGGCAAGGGAAAGAAGGGGAGAGTCTACACTAGTCGTGCCTCAGAATGAAGGCTGTAGTTCAGTATGTGTGCGCGCATGCACATGTGTATGTGTACCTGTGTGTGTGTGAATATGGGAAGTCATTCTAAATTTTAAAGAGAAGAATTTCATACTAATATTTTCTCTGTACTAAAGAACTCCTACTAAGAAATTCCCTTCTCTTTCTTTCACTGGAATAGCTTTCTAGAGGTTTTGTTTACTCTTTAACCTGTAAAGAAATGTGATTCTCCCAGACACTAGAGCAGTGTTGTGGCGTCCTAGCCCTCTTCCTCCCACAGAGAATTCAAAACTCTTCTAGTCTCTTTGGAGGAGATGTTTAAGGGCTGACATACCACTCCAATAAAGGAGCAAGTTATACT TCONS_00247164 . 3' 1 TCONS_00247164 . 3' 2017 EMBV3_21517 GGAACCCAGGAGTGAGCAGACTCTTACAAGGGAGGAGCACGGAGAAGTATTTGCCAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18960 TCCTTGTGTCAGGAGCCTAGTGCACAGATGAATATTAACAGCTCTCACCAAGCAGTCCAC Gene GeneID:100336279|LOC100336279:XM_002685744:494_cdna UTR3_Alt 2 NULL GeneID:100336279 2 GENE LOC100336279 NULL hypothetical protein LOC100336279 EMBV3_04255 TGTGGATCCAAGAGGATGTTTTCGCTTATTTTTCCAGAAAGCCAAAGCAGAGGAGGAAGG Gene GeneID:510572|CDC37L1:NM_001098931:50_cdna Constitutive 0 NULL GeneID:510572 8 GENE CDC37L1 MGC165750 cell division cycle 37 homolog (S. cerevisiae)-like 1 EMBV3_16118 CAGGTTGACAGAAAGGTTGCAAAGATACAGTTCCCATGTCACTTGTGCTGGGCTTCCTAC Gene BVT0101_002344 + 0 NULL GK000022.2:57432322-57489760 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127594 TCONS_00127592 TCONS_00127593 1 XLOC_077686 NonCoding TCONS_00127593 XLOC_077686 NonCoding NonCoding PPARG-TSEN2 22:57451448-57467443 x TSS95401 1749 1 TCONS_00127593_3 73 0.471698113207547 4 0.890896586219832 0.000117616837651675 7.46882838548369e-05 0.000105777730765695 0.000157562118984005 2.73704854135993e-06 0.000106350742628185 0.000121732598544886 0.000173314041506933 0.000473865466316421 0 9.93467116492623e-05 0 0.000118383660184992 0 0.000139953135719984 0 0 0 9.82301144895896e-09 6.23240916702569e-159 2.37599138970676e-05 0 0 9.58526651988456e-06 0.000329738585461381 0.000114870246290428 0.000212892023428133 6.04300800711797e-219 2.77463684101544e-06 4.30735304917113e-06 XR_234831.1 LOC101902270 PREDICTED: Bos taurus uncharacterized LOC101902270 (LOC101902270), 2e-07 62.6 83.05 0.0331618067467124 XM_005263354.1 WHITE PREDICTED: Homo sapiens ATP-binding cassette, sub-family G (WHITE), 6e-07 60.8 74.77 0.05431675242996 0 noncoding ACGGAGGGCAACGTCACTCATGCCTGACGGTGACGGAACACACGTTTGCATCTTTGAAGGTTTGCAGTTTGAAGGGTCGTATGCATGGGATTTACTGTAATGTGTGCAAGACACTGAGAACCGCTTGGCACAGAAGAGACTCAATTAACTGAGAACACTGTACATACCAGTTAATCAACGTTTCACAAGACTACCTTCTGGAAAAAGAAATGGAAAAATGTTTGACTTGACACATCAGCGGCGTCCAACTATCTCAGCATGTCAGATTCATTTGTCTTAGTTATAAATTAACCCAAAAGCAACTCTCCTGACTACCCAGCGCTCCTGTTTCCTGTGTGCCGGGCTCCTTTCTACTTGCACCACTTAGGATACAGGGCCATTTAAACTTCTGGTTGAACTCCCAGAAATTTTACCTGAAAACAGCATGATCTTCTCTTCTCTTCACCATTCAAATATAAGGCTCCTAATTCTACAGGCTTGTTCAAATGCTGTCTTGCATCAAGAAGAACGGTGGACCCAGAGATCATTAATGAGATGTAGACTTAGTTTGAACACTGAAGTCACACCCTGACCATCGCCAGCTAAAATTTTTGCTAAGAGGTGGTTTCTGAGGACGCAGCGCCTTGTGGGTGTTCTCCCCCACTCACAGGTGTTCTAGGGGCTGGAAGCAACTGGTTGGAGAACTACCTGAGGAGGAAGCCTGTGGAACTGAAGAACTATGTGGGGAGGAAGGCTGTGGAGCCTAAGGAAGCGCTGTGCACACACAGGATTAAGAAAGAGCTCAAGGTGTAATCCTTGATGAGAAGAGTGTTCTAAAGTTGGCCAACAAACAGAAACTCCCTCTGAAAACCAGTGAGAATCTAATAAGAATGGTTACTGAGGGACTCCAATGTAACTTCGAAAGAACGTCTCATCTTGAAATAATTTCAGGTTGACAGAAACGTTGCAAAGATACAGTTCCCATGTCACTTGTGCTGGGCTTCCTACTGTGAACATTTTACAACGGCAGCCCAACAAGGAAAACTAATAAATGAACTGGCACGAGAATGTAAACAGGTTTATTCGGATTTCACCAGTTTTTCCATTCAGGCCCTTTCTCAGTTCCAGGGCCCAGTCCAGGATCCCACATTGTGCTCTGTAGCTACTTCTCCTTATTTCCTCAGTTTCTCACTCTTTTTTCTTCTTCTTTTTTTTAAGAGGTATACTTGACATACAGTGAAGTGCACACATTGAACGATCAGTACCTCAGTCTTTGTCTTTCATGCCCTGGACACTGTTGAAGAACGCTGGTGAGGTACTTCGTGGAATGTCTATTTAGATTTGCCCAACATTTTCTCAGATTCAACTACTGTTATGAATTTTGGGGAAGAATTCTGAGGACCTGATGGGCCCTTTTCAATATGTCTTATTACTGTGGATATAAACCTGTTGACCTGGATTACTTGGTTAAAGTGGGCTCTGCCAGGATTCTCCCCCATAAAGTAACTACTTTTCTTTTTGTAATTAATAAATATTTGGAGGGAGACACTTTGAGGTTCTGTGTCCATATTCTGCTCCTCCTGACACTCATCTACTGGTCAGTGGCCCTGCCGGGAGCAGTCACTGCTGCTGGGGTTCTCTGAAGGCAATTTTCCATCTCCCTCATCCCTTTCACGTTTACTAATTTAAATTCTTCTGTACAGAAAAGTACTTCTCCTTCCATTTACTTATTCATTCAGTCATTCATTTATTTTGTTTTGTGCCTTACTC TCONS_00129284 TCONS_00129279 r 5' 0 TCONS_00129284 TCONS_00129279 r 5' 0 EMBV3_04153 CCCTGCGCTATGCCTCTGTTCTCACAAACAATGTCATCATCAGGATTGGGCTGGCCATTA Gene GeneID:785068|LOC785068:XM_002693383:10_cdna Constitutive 0 NULL GeneID:785068 15 GENE LOC785068 NULL similar to olfactory receptor Olr60 (predicted) EMBV3_06900 AGATAATAGAAGATGTGGAAGCAGACTGAATGACCAGTGAGGTGTCTGTGGAACCCAGGG Gene BVV0102_224818 + 1 EMBV3_03330 GK000019.2:14851131-14858563 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26978 ACTACTACCTGACCCATCCACTACCCTAAGCAGAAGTGATTGCCAAGGGTCTTAACCTGC Gene BVT0102_238170 + 0 NULL GK000003.2:36429817-36546722 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42757 GTTTGCCTTCGTGGGCTTCATGCTGATCCTGGTGGTGGCGCTGCTCTCCGTCTGGAAGAT Gene GeneID:534581|IL20RB:NM_001102175:54_cdna UTR3_Alt 3 NULL GeneID:534581 1 GENE IL20RB MGC140349 interleukin 20 receptor beta EMBV3_20507 AAGAAACAGGAGAAAGCCCTACGGCGGCTCCACGAGTTGGCAGAGCAAAGAAAACAAGCT Gene GeneID:534759|GPATCH8:XM_002696075:4_cdna UTR3_Alt 3 NULL GeneID:534759 19 GENE GPATCH8 NULL G patch domain containing 8 EMBV3_12350 CTGTGGTCACCAAGACAGCCTGGAAGTTGCAGCCTGACGGGTCACACGTCCCCCGTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16183 CTTCTCTCTCAACTGTCTTTCCCCCAAGGCTTCTAACATCCACTGAGGGTTCTCATCTGG Gene BVT0102_240698 - 1 EMBV3_18415 GK000025.2:7530481-7563333 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10782 CGTAATAGCGGGTTTAAGGAGCTAAGAACAGTTAAATAGTCAGGACTGCCACCTGCTGAC Gene GeneID:520518|LOC520518:XM_002686401:263_cdna Constitutive 0 NULL GeneID:520518 3 GENE LOC520518 NULL similar to Hcp beta-lactamase-like protein C1orf163 EMBV3_08197 TCCTTCCTCCTACTCCCACTTCCCAGAGATAACCCTTGAAACCACAATCTGAGATATTCT Gene GeneID:540702|C3AR1:NM_001083752:58_cdna UTR3_Alt 1 NULL GeneID:540702 5 GENE C3AR1 MGC139631 complement component 3a receptor 1 EMBV3_20798 CCCTCATTGGAGCTCACCCACCCTCCTGAAGTTGGTATGACTCCTTCCTGCTTAAGATTT Gene BVV0102_068177 + 0 NULL GK000001.2:6603892-6609162 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000178 TCONS_00000176 TCONS_00000180 1 XLOC_000053 Coding TCONS_00000176 XLOC_000053 Coding Coding LTN1 1:6545968-6605896 = TSS93 7844 1 TCONS_00000176_9 1766 0.0316165221825599 30 0.869608023094765 0.000718119898065956 0.00108172111606384 0.000615489877924924 0.000380909892290843 0.000673969972333426 4.90500373406034e-09 0.000287972280045734 0.000444073991888634 0.000726317984989257 6.76775715489791e-08 8.61779713069654e-05 0.000149693136418072 4.98078994250824e-09 3.91181083286332e-08 7.73278460507354e-05 0.00168329103094299 0.000234163163143802 0.00253910027256834 0.000270517987727003 0.000481021955911576 2.00846258486813e-09 0.000759526746864942 0.00015845305889605 0.00155130924772693 0.00102206594095774 0.000189355061358247 1.17335868215047e-08 0.000272482534344749 0.000358241080646488 5.67887826179922e-15 XM_005201120.1 LTN1 PREDICTED: Bos taurus listerin E3 ubiquitin protein ligase 1 (LTN1), transcript variant X1, mRNA. 0.0 1.290e+04 99.27 0.925675675675676 NM_015565.2 LTN1 Homo sapiens listerin E3 ubiquitin protein ligase 1 (LTN1), mRNA. 0.0 9315 86.84 0.982661907190209 TCONS_00000176_9 sp|O94822|LTN1_HUMAN LTN1_HUMAN E3 ubiquitin-protein ligase listerin; 0.0 3214 89.86 0.999433748584372 2 coding 0 0 0 0 0.904207195072176 0.265392239208621 0.0388350527747645 0.506067893296568 GTCCTTTTCCGGTGCCAGGGGCCGGAAGTTGTGGCCCGGCTGTGTCAACCCGGGGGCTGCGGGCTGGGAGTGCGGCTGAGACCGCGACCATGGGCGGGAAGAACAAGCAGAGGACCAAGGGGAATCTGAGGCCTTCAAACAGTGGCCGAGCTGCAGAACTCCTTGCCAAGGAACAGGGAACAGTGCCTGGATTTATTGGTTTTGGAACATTTCACAGTGACCTAGGCTATGTTCCTGCTATTCAAGGAGCTGAAGAAATAGACAGTCTTGTGGATTCTGATTTCCGAATGGTGCTGCGGAAACTTTCTAAGAAAGATGTCACAACAAAACTAAAAGCTATGCAGGAATTTGGAACCATGTGTACAGAAAGAGACACAGAAATTGTAAAAGGAGTTCTTCCATACTGGCCAAGAATTTTCTGCAAAATTTCACTTGATCATGACCGCCGGGTTCGAGAAGCCACACAGCAAGCTTTTGAAAAACTTATCCTTAAAGTAAAGAAACACTTGGCTCCTTATTTAAAAAGTTTAATGGGTTATTGGCTGATGGCTCAGTGTGATACTTACACACCGGCTGCCTCTGCAGCAAAAGATGCCTTTGAAGCAGCTTTCCCTCCGAGCAAGCAACCTGAAGCCATAGCATTTTGTAAGGATGAAATCACAAGTGTGCTACAGGATCATCTTATCAAAGAAACACCTGATACCCTCAGTGACCCACAAACTGTTCCAGAGGAAGAGAGAGACGCTAAATTCTATCGAGTCGTAACTTGTTCCTTATTGGCATTAAAGAAATTGCTTTGCCTGTTACCTGATAATGAGCTTGACTCTCTGGAGGAGAAATTTAAGTCTCTTTTATCACAGAATAAGTTTTGGAAGTATGGAAAACATAGTATACCTCAGATCCGCTCAGCCTATTTTGAGTTGGTTTCTGCTTTGTGCCAGCGTATTCCACAGTTGATGAAAGATGAAGCATCCAAAGTGAGCCCATCTGTTCTTCTTAGCATCGATGACAGTGACCCCATTGTATGCCCAGCTCTCTGGGAAGCTGTACTTTATACACTTACAACTGTGGAGGACTGTTGGCTTCATGTAAATGCAAAAAAAAGTGTGTTTCCCAAGCTGTCAGCTGTGGTTCGTGAAGGAGGTCGGGGTCTGGCTACTGTCATATATCCTTATCTTCTGCCCTTCATCAGCAAACTCCCTCAGTCCATTACAGATCCAAAGTTGGATTTCTTCAAGAATTTTCTCACCTCCCTAGTTGCAGGGCTATCAACAGAAAAAACCAAAACCAGCTTTTCAGAGTGCTCAGCAGTGATATCTGCTTTTTTTGAATGCTTACGTTTTATAATGCAACAAAACTTAGGGGAGGAAGAGATAGAAGAGATGCTCGTCAATGATCAGTTGATTCCTTTTATTGATGCAGTTCTCAAAGACCCAAAGTTGCAAGATGGGCAGCTATTTAACCATTTGGCAGAAACTTTAAGTTCCTGGGAAGCCAGAGCCGATTTGGAAAAAGATGATAAAACAGCTCGCAACTTGGAGAAAGTGCTGCTGAATTTCTGGGAAAAACTATCAGAGATCTGTGTTGAGAAAATCAATGAGCCAGAAGCTGATGTTAAGTCAGTTTTGGGTGTTTCTAACCTATTGCAGGTCCTTCAAAAGCCGAAGAGCTCCTTGAAATTGAATAAAAAAAAAGTTGGTAAGGTTAGATTTGCTGATGAGATGCCTGAAAATAATAAGGAGAATGAGAAATGTGTCTCCTCAGAGGGAGAGAACAGTGAAGGCTCTGAGTTAATGGCTGAACCTTCTGTCTCTCCGAGTTGCTCCGACCTTATATCCCCGCTGAGGAAAAAACCTTTGGAAGACTTAGTCTGTAAACTGGCAGAGATGAGCATTAATTACGTCAATGAACAAAAGTCGGAGCAACATCTCAGGTTTCTTTCCACCCTGCTCAACTCGTTCTCGTCAACCCAAGTGTTTAAAGTGCTGCTAGGTGATGAAAAACAGAGCACTGTCAAAGGCAAGCCTCTTGAAATAGCCAAACTTGTACAAAAAAATCCCGCGGTACAATTTCTATACCAGAAAATAACAGGTTGGCTAAATGAAGATCAAAGGAAGGATGCCGGTTTCTTGGTGGACATTCTGTACAGTGCCCTCTGTTGCTGTGATAGTAATGTGGAAAGAAAAGCTATTCTGGATGATCTTATTGAGGTAGAGCTGAAATGGAATTCTATTCTTCAGATCATTGAAAAGGCATGCTCTAGTTCAGATAATCATGCTTTAGTAACACCTTGGCTCAAAGGAGATATCCTTGGAGAGAAATTGGTAACCTTGGCAGAGCATCTTTGTAACAAAGACTTGGAATCCACAGTATCTTCTGAACCTTACTTCTCAGAAAGATGGACTCTTTTAAGCATGGTGTTATCCCAACATGTTAAAAACGATTACTTGATTGGAGAAGTTTATGTTGAAAGAATTATTGTTAAACTTCATGAAACTTTATCCAAAGCAAAGAAATTGTCAGAAGCTGAAAATAATGACTCATCAGTGTCTTTTATCTGTGATGTGGCCTATAACTATTTCAGCTCAGCGAAAGGATGCTTGCTAATGCCATCATCTGAAGATTTATTATTAACTCTCTTTCAGTTATGTGCTGAGAGCAAAGAAAAAACACATTTGCCAGACTTTATCATCAGTAAACTGAAAAATACTTGGCTCTCTGGTGTGAATTTATTGGTTCATCGAACTGGTGACACATTTAAACAGAGCACCTTCCTACGTTTATCTGCTCTGTGGCTGAAGAACCAAGTTCAGTCTTCAACTTTGGATGTCACAAGTCTTCAGGTTCTTTTGTCTGCTGTTGATGATTTGCTAAATGCGCTTCTAGAGAGTAAAGATGCTAATCTCCTAGGAACTTATATTGGAAGCGTAATGCCAGACAACAGTGAATGGGAAAAAATGAGACAGTCTCTTCCCGTACAGTGGTTGCATAGGCCTCTTTTAGAAGGAAGATTGAGTTTGAATTATGAGGGTTTCAAAACAGATTTTAAAGAGCAAGATACAAAGAAACTTCCCAGCCATTTGTGTACTTCAGCATTATTGAGTAAAATGATAGTAGTTGCACTGAAAAAGGAAACAGTCCTAGAAAATAATGAACTTGACAAAATAATTGCAGAACTGCTCTATTCATTGCAGTGGTATGAAGAATTAGACAATCCACCTATTTTCCTAACTGGATTTTGTGAAATGCTTCAGAAAATGAATATCACGTATGATAACTTACGTGGACTTGGTAATACTTCCGGCCTTCTGCAGCTGTTATTTGACAGATCCAGGAAAAACGGCACCCTTTGGTCTCTTATTATTGCTAAGTTGATCCTTTCCCGAAGTGTTTCATCTGATGAAGTAAAACAGCATTATAGGAGAAAAGAAGGTTTTTTTCCACTAACAGAAGGCAATATGCATACTATTCAAAGTCTCTGTCCATTTTTGTCAAAAGAAGACAAGAAAGAATTCATTGTTCAGTGTATACCTGCCCTTTTGGCCTGGACCAAGGAAGATGTTTGCCATATTAATGGAGGTTTTGGACATCTTGCCATTTTCAATTCTTGTCTGCAGACCAAAAGCATAGATGATGGAGAGCTATTACATGGTCTATTAAAAATTCTGATAACATGGAAAAAAGATCACGAAGATATTTTTCTTTTCAGTTGTAATCTGTCAGAAGTAAGTCCAGAGATACTGGCTGTAAATATAGAAATAATCCGTTTCCTTTCCCTGTTTCTGAAATACTGCTCATCTCCTTTGGCAGAGAGCGAATGGGACTTCATCATGTGTTCCATGTTGGCTTGGTTGGAGACAACAAATGAGAATCAGGCACTGTATTCTGTTCCACTTGTACAACTGTTTGCCTATGTCAGCTGTGATTTGGCCTGTGAACTCAGCGCGTTTTTTGATTCTACAACTCTGGTCACCACTGGCAGCCTTCCTGTAAATCTGATCAGTGAATGGAAAGAATTTTTTTCTCCTGGCATCCACAGTTTGCTTTTACCTCTTTTGGTGACTGCTACAGGAGAAAACAGAGATACATCTGAAACATCATTTCAGAATGCAATGCTGAAGCCCATGTGTGAAACATTAACTTATATCCCAAAGGATCAGCTATTGAGTCAGAAACTCCCTGCAAGATTGATTGCTGGTCAGAAAACAAACTTGCCAGAATACCTCCAGACTTTGTTAAATACATTAGCCCCATTACTCCTTTATAGAGCTCGGCCTGTGCAAATTGCTGTCTATCATATGCTATACAAATTGATGCCTGAACTCCCACAATATGATCAAGATAATCTAAAGTCATATGGAGATGAAGAAGAAGAACCAGCCTTGTCGCCACCGGCTGCACTGATGTCTCTTCTTAGCACTCAAGAGGACTTACTAGAAAATGTTTTGGGATGTATTCCTGTTGGACAGATAGTTACTATCAAGCCACTGAGTGAAGACTTCTGTTATGTTCTGGGGTACCTCCTCACTTGGAAATTAATACTTACTTTCTTCAAAGCTGCTTCATCTCAGCTTCGAGCTCTGTATTCAATGTACCTTCGAAAAACAAAAAGTTTGAATAAATTGCTTTATCACCTGTTCAGGCTTATGCCAGAAAATCCAGCCTTTGCAGAGACAGCTGTTGAGCTCTCCAATAAGGACCCTCGAACTTTCTTTACAGAAGAGCTCCATTTGGGTATTAGAGATACCTCAGCTCTTCCCTACCATATTCCACACTTGGCTTGTTCAGTCTATCACATGACATTAAAAGACTTGCCAGCCATGGTCAGGCTGTGGTGGAACAGTAGTGAGAAGCGTGTGTTCAATATCGTAGATAGATTCACCAGCAAGTATGTTAGCAGTGTTCTTTCTTCTCAAGAAATATCTTCTGTGCAAACAAGTACACAGCTCTTTAATGGCATGACGGTTAAAGCTCGAGCTACTACTCGAGAAGTCATGGCCACTTACAGTATTGAGGATATAGTGATTGAACTTATAATACAGCTGCCTTCAAATTATCCATTGGGCTCAATAACAGTGGAAAGTGGGAAAAGAGTTGGAGTGGCCGTGCAGCAGTGGCGAAACTGGATGCTTCAGCTGAGCACTTACCTCACCCATCAAAATGGAAGTATTATGGAAGGCTTAGCATTATGGAAAAATAATGTAGACAAACGTTTTGAGGGTGTTGAAGATTGCATGATTTGTTTCTCAGTCATTCACGGTTTCAACTATTCTCTTCCCAAAAAAGCCTGTAGAACATGCAAAAAAAAGTTCCATTCAGCTTGTTTGTACAAATGGTTTACATCCAGCAACAAATCCACTTGTCCACTCTGTCGCGAGACCTTTTTCTGAGATTTTTTTTCCCCTCAATGGAATTGATCCCTGAAGAAATTCGAGCAAAGGCAGTGGATTTGATTCATCTTGGAGTGCTGATGTGAGGAGGCCGCTGAGCATTACCTTCAAATAGGGCCTTCTCTGGAAAATTATTTTGGTTCATGTAATGATCTTAAAATCAGGTTTACTTATCTTTAGATTGCTTTGTAAATGTTTGGAAACCTTTTCTTTTACATGAAAATATTACATATTAGAGAGAAAAATATTTATATAAATAGTTCAATCGCTTTGTACATTTAAAAATAAATGTGGAAAAACCCTAAATTACAGAGTGGGAATTGGTGAAAGCATTGCACAAGTGTATTATACTGATAAACTCATTCATTTAGTTTATCTATGTTTAGAACAGTCCGAGTGAGGTAATGAATTGAGAGGGTTGATTTACATCCACAGATATTTTGAGACTTATTTATTAGTTACAACAACAAAATTAATTAGTATTCTGATATTTGTAGATTATTTTAATGATAAAATGACATTAAGCTATTAATATAGCTTATTTTAAGCTATTTAAAGCATGCTCTGAAAGCCTATGTAAAAGAGTATAAACTGAACTTTAAGGTGCCTCCATTTAGTAAGGGTTTTGAAATTCAGAAAATTAAATTCAGAACACTGACCTTTTTACTGTAAAAGAATTTCCTTGTGCTAGTGAAATTTGGATTGCAGACGTGTCAGTGAATTTATTACTCAGTTGCAGTGAGTCTCCAGAGGGTGAGAATTTGAGAGAAACAGAAGTCACCTTATTTTATTCATGAAGCAGAGTGGTTTCTATTCTTCTGTCAAGAACAAAGAAATAGTTATTTCTGAAACTTAAGAGTGGTGGAAAAAGCAAAAAATATAAAAACATTGTAGGAGGCTTTAAATTTTGTAAGCAAATTTTGCTATTCTTACTGGTCAGAATTACACTAAATTAGAGAGAGTTGAGGGGAGCTAATTTTTTCTAGCCTTCATAAGTGTGAGTTAGACATTTTAATACTAAGTATAATTCAGTATAACAGGCTGAAATGAGGTAGGTGAAGACCTGAGTTTTGCTACAGCATTACTGCCCTTAAAAACTGTGCCCAAAATATAAAAGTGTGAAAGTTTGGAACTTGGAATAATTTTATTGCAGTCTTCCATCACATGGGAAATAATTAGCCTATCTCATAGCAAGGTTACGTGAAGACTCAGCTAATCATCTCTGTTGCAAATGTTTAATTGGCAAAAAGCAACTCGTGTTAAATAAAAGTACTGTATACTATCAGCTGGGTAAAATGGTTATTATTGAAATAGTACGAATGTGGTCAGAGCATTGTAGTGGAGACTGAAGTATTCCGTGTGAGTTAAAGATCTTGAGTTGTATTGTAGATGCAGTGTCCTGCCCAGTTTTATCTGTCTCCTAAAATTTTCTCTGTAGTATTTATTACCTTATAGCCTTAGGCTCAAGGAATACAGATAGCAAAATTCTACTACCTCTTCTTCACCCCTTTCTTAAAATATTCTCTCTTTTTCCTATGTCTGTCTCTGACATAGTAAACCCAAAAGATTGTGTTACTCCTCTGTGAAAATTACACACTTTTCCTTTAAAATTGTTTTATAGTAAGGCTTTGTTTATAACTTTTCCAGTATTGGTACGTCTTGCTTCTGACCCATACCCCAAGTAGAAAAGAAAAGGGAATAATGGAGCATTGTTTTTCCACATTATTCTTCAGGGTATCAGGTTCTCCGGTGAAAGAGTATAATTAAGTGAGATGCCTACTTGTCATACTTAGGACACTTGGCACATTTCTTTTAGACTTGTAAATACAAATGTAAAGCTTGTTATTGTTTATACACTAAAGAAGAAGCTTTCCAAAATAAAACTGAAATTCAGAATATCACATTATAATTAAAGTTTGTTTATATAGCTTTGACAACTCGAGAGCATCCCTTAAAATTCTAGCATTAAGGACATTTTAAAATTGCATGAGATTCAGAGCCCATTAGTAAAATTGTTAATTTAAAGCCCTGATGTAAATTGCAAATTTTAGAATTTATTTTTAACTCTTATTTATCACATGCTGTAATGTATGTATATAAGTTTCTGTGGCTTAAAGCAATGTCATTACTTGAGTTTGTGTGGTGTGAATAATTATTTGATTGTTAATACCATATGTGCCCATTAAAATTCTTTTTAATTGCAAAATATTTCAAATATACATAACTAATAATAATATAAATGCCCTTGTACTCTTCATAAACTATTTTGCCATATTTGCTTTTGATTTTTAAAGAAATAAAATGTTACTCTTTTGTACTCTTCCCTGAGACCATCTCCTCCTTCCCTCATTGGAGCTCACCCACCCTCCTGAAGTTGGTATGACTCCTTCCTGCTTAAGATTTTATATTTTACCACATGTTTCTGTCCATACATAATACAGCAGTTTTTCAAAA EMBV3_07279 ACTAGCTGCCCACAGCAGCCATCCGTCTGGATAATAGCAAAACACTCTAGATAAGTTATT Gene BVT0102_095106 + 0 NULL GK000006.2:101271814-101289571 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206025 TCONS_00206020 TCONS_00206029 TCONS_00206019 TCONS_00206024 TCONS_00206021 TCONS_00206022 TCONS_00206030 TCONS_00206031 TCONS_00206035 TCONS_00206032 TCONS_00206027 TCONS_00206023 TCONS_00206026 TCONS_00206028 1 XLOC_124810 Coding TCONS_00206035 XLOC_124810 Coding Coding WDFY3 6:101286904-101484302 = TSS153719 13816 1 TCONS_00206035_16 3288 65 0.930338353673055 0.00241882327674616 0.00270213923092381 0.00252004093116944 0.000538516457166313 0.00138733663175651 0.00017752436393535 0.000852990304257387 0.00131391777718881 0.00295542705886356 0.000989047319465676 4.27255942274742e-05 9.84452188792262e-05 0.000361588900212617 0.000552052426152873 0.00107386899303991 0.00732347421813184 0.000375078673103643 0.00661786773169409 0.00109755855372305 0.00190455603790581 0.00104046975669856 0.00291883612084991 0.00319566387708919 0.00461750367628328 0.00193014379886794 0.00307493783810709 0.00204867709403177 0.000461880883885517 0.000276620178527617 0.00140896831442469 XM_002707826.3 WDFY3 PREDICTED: Bos taurus WD repeat and FYVE domain containing 3 (WDFY3), mRNA. 0.0 2.492e+04 100.00 0.99992762015055 NM_014991.4 WDFY3 Homo sapiens WD repeat and FYVE domain containing 3 (WDFY3), mRNA. 0.0 1.867e+04 89.90 0.9998552403011 TCONS_00206035_16 sp|Q8IZQ1|WDFY3_HUMAN WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3; 0.0 6684 97.69 0.999695863746959 0 coding 0 0 0 0 -0.0188508800149251 0.952371104200046 -0.0593092328499594 0.302017235905603 ATGAACATGGTGAAGCGGATCATGGGGCGGCCGAGGCAGGAGGAATGCAGCCCGCAAGATAACGCCCTAGGACTGATGCACCTCCGCAGGCTCTTCACAGAGCTGTGCCACCCTCCTCGGCACATGACCCAGAAGGAACAAGAAGAGAAGCTGTACATGATGCTGCCAGTGTTTAACAGGGTTTTTGGAAACGCTCCGCCAAATACAATGACAGAAAAATTTTCTGATCTGCTGCAGTTCACAACACAAGTCTCACGACTGATGGTGACAGAAATTCGAAGGAGAGCATCAAACAAATCCACAGAGGCTGCAAGTCGGGCCATAGTCCAGTTCTTGGAAATCAATCAGAGTGAAGAAGCCAGTAGAGGTTGGATGCTTCTGACAACAATTAATTTGTTAGCATCCTCTGGTCAGAAAACCGTGGACTGCATGACAACAATGTCAGTGCCTTCCACCCTGGTTAAATGTTTATATCTGTTTTTGACCTTCCACATGTGCTGAGGCAGTGGAGGTGCACAGAATGAGCTACCTCTAGCAGAACGTCGGGGACTACTCCAGAAAGTTTTTGTACAGATCTTAGTGAAACTCTGCAGTTTTGTTTCTCCGGCCGAGGAGCTGGCTCAGAAAGACGATCTCCAGCTTTTATTCAGTGCAATAACCTCTTGGTGCCCTCCCTATAACCTGCCTTGGAGGAAGAGTGCCGGAGAAGTCCTTATGACCATATCCCGTCATGGTCTCAGTGTCAACGTGGTGAAGTATATTCACGAAAAAGAATGTTTATCTACGTGTGTTCAGAATATGCAGCAGTCAGATGACCTGTCTCCCCTAGAAATTGTTGAGATGTTTGCTGGGCTTTCTTGTTTCCTCAAAGATTCCAGTGATGTTTCCCAAACTCTTCTGGATGATTTTCGGATATGGCAAGGATATAATTTCCTTTGTGATCTCTTGCTTAGATTGGAACAAGCAAAAGAGGCAGAATCCAAAGATGCCTTGAAAGATCTGGTTAATCTGATAACTTCCCTAACAACATATGGTGTCAATGAACTAAAACCAGCTGGTATTACCACAGGGGCACCCTTTTTATTGCCTGGATTTGCAGTACCTCAGCCTGCGGGCAAAGGTCACAGTGTGAGAAACATCCAGGCCTTTGCAGTTCTTCAAAATGCATTTTTAAAAGCAAAAACCAACTTCCTCGCCCACATCATTCTCGATGCCATCACAAATATTTACATGGCTGACAACGCCAACTATTTCATCCTCGAATCACAGCACACACTGTCACAGTTTGCAGAAAAAATTTCTAAACTCCCAGAAGTACAAAACAAGTACTTCGAGATGCTGGAGTTTGTTGTTTTTAGCTTAAATTATATCCCTTGTAAAGAACTTATTAGTGTTAGCATCCTCTTAAAGTCTAGCTCTTCTTATCACTGTAGCATTATCGCGATGAAAACACTTCTTAAGTTTACACGACATGACTACATATTTAAAGATGTGTTCAGGGAGGTGGGCCTTTTGGAGGTCATGGTAAACCTTTTGCACAAATATGCTGCCCTCTTGAAGGATCCAACTCAGGCACTAAATGAACAAGGGGACTCAAGAAATAATAGTTCATTTGAAGACCAAAAACACCTGGCTTTGTTAGTCATGGAGACTTTGACAGTGCTTCTTCAAGGGTCAAACACAAACGCAGGAATTTTCCGAGAATTTGGAGGCGCAAGATGTGCGCATAATATAGTGAGGTACCCACAGTGTCGGCAGCATGCCCTGATGATGATCCAGCAGTTGGTGCTGTCTCCCAATGGGGACGATGACATGGGCACGCTTCTGGGACTCATGCACTCGGCCCCACCCACAGAGCTGCAGCTGAAGACCGACATCCTCAGAGCCCTCCTGTCGGTCCTTCGAGAAAGTCACCGTTCCAGAACAGTCTTTAGGAAGGTTGGAGGCTTTGTGTACGTTACGTCCTTGCTCGTGGCTATGGAAAGGTCTTTGAGTGCGCCCCCCAAGAATGGGTGGGAGAAAGTGAGCCAGGGCCACGTGTTTGAACTTCTCCACACCGTGTTCTGCACACTGACTGCAGCGATGCGTTATGAGCCAGCCAACTCACACTTCTTCAAAACAGAGATTCAGTATGAGAAGCTGGCAGACGCTGTTCGATTTCTTGGCTGCTTCTCAGACCTAAGAAAGATCAGCCCCATGAATGTCTTCCCTTCAAATACTCAGCCATTTCAAAGACTTTTAGAGGAAGACGTCATCTCGATGGACTCGGTGTCACCCACTCTGCGGCACTGCAGTAAACTCTTTATTTATCTCTACAGAGTAGCCACAGATTCTTTTGACAGTCGTGCAGAACAGATCCCTCCTTGCCTGACAAGTGAGTCTTCTCTTCCCTCTCCTTGGGGGACTCCAGCTTTGTCCAGGAAAAGGCACGCGTATCATTCTGTTTCTACTCCCCCCGTCTACCCTCCTAAAAACGTTGCTGACCTGAAACCACACGTGGCAACTTCATCTCTCTCAAGTTCTGATGCCGTCATCATCCATCCTGGAGCCATGCTTGCTATGCTGGATCTCCTGGCCTCTGTTGGGTCAGTGACACAGCCAGAACATGCCTTGGACCTTCAACTTGCCGTGGCCAATATTTTACAATCCCTGGTGCACACGGAAAGAAACCAGCAGGTCATGTGTGAAGCTGGTCTCCATGCACGACTGCTGCAGCGGTGCAGTGCCGCTCTGGCTGACGAGGACCACTCGCTGCACCCACCCCTGCAGCGCATGTTCGAGCGATTAGCCTCTCAAGCGCTGGAGCCCATGGTGCTCAGGGAGTTTTTGCGTTTGGCAAGTCCATTAAATTGTGGTGCCTGGGACAAAAAACTGCTAAAACAATATAGGGTCCACAAACCAAGTTCACTGAGTTTTGAGCCAGAGATGAGAAGCAGTATGATCACATCCATGGAAGGTCTGGGTTCTGATAATGTTTTCAGCTTACATGAAGATAACCATTACCGGATAAGCAAGAGCCTAGTGAAATCTGCAGAAGGAAGTACTGTACCCCTAACCAGAGTGAAATGTCTGGTCTCCATGACAACCCCACATGACATCAGACTTCATGGGTCATCAGTTACTCCAGCTTTTGTTGAATTTGACACATCCCTTGAAGGGTTTGGCTGCCTGTTCCTGCCCAGTCTGGCCCCTCATAATGCCCCTACAAACAATGCTGTCACAACAGGTCTTATCGATGGGGCCGTGGTCAGCGGTATTGGTTCTGGTGAACGATTCTTCCCTCCTCCATCTGGCTTAAGCTACTCCAGCTGGTTTTGCATTGAACATTTTAGTTCTCCTCCCAGTAACCACCCAGTCAGACTCCTTACTGTTGTTCGCCGAGCAAATTCTTCTGAGCACCATTATGTATGCCTTGCCATAGTTCTCTCTGCAAAAGATCGGTCTCTGATTGTCTCCACCAAAGAGGAACTACTCCAAAATTATGTTGATGATTTTAGTGAAGAATCCTCTTTCTATGAGATTCTGCCATGCTGTGCTCGCTTCCGTTGTGGAGAACTGATCGTTGAGGGACAGTGGCATCACCTGGTTCTGGTGATGAGCAAAGGGATGCTGAAGAACAGCACTGCAACCCTCTACATCGACGGCCAGCTTGTCAGCACTGTGAAGCTTCATTATGTTCACAGTACTCCCGGGGGCTCAGGCTCTGCAAACCCACCAGTGGTTAGCACAGTCTATGCCTACATTGGTACTCCGCCTGCCCAGCGCCAAATTGCTTCATTGGTTTGGCGCCTGGGACCTACACACTTTCTAGAAGAAGTATTACCTCCTTCAAATGTTACTACCATTTATGAACTAGGACCAAATTACGTGGGAAGCTTTCAGGCCGTATGTATGCCATGTAAAGATGCAAAATCTGAAGGTGTGGTCCCATCTCCTGTGTCATTAGTACCAGAGGAAAAGGTGTCATTCGGCCTCTATGCACTGTCCGTGTCCGCCTTGACAGTGGCGAGAATCCGGAAGGTGTACAACAAGCTGGACAGCAAAGCCATCGCTAAGCAGTTAGGCATTTCCTCCCATGAGAACGCCACTCCTGTGAAGCTGATCCACAACTCCGCAGGACACCTCAATGGGCCCGCACGGACAATCGGGGCCAGTCTGATTGGATACTTGGGAGTAAGAACATTTGTTCCTAAGCCTGTTGCCACTACTTTGCAGTACGTTGGTGGGGCCGCAGCCATCCTGGGCCTGGTAGCCATGGCTTCTGATGTGGAAGGGCTGTATGCAGCGGTCAAGGCCCTAGTTTGTGTGGTCAAGAGTAACCCACTAGCCAGCAAAGAAATGGAAAGAATCCGGGGCTACCAGTTGCTGGCAATGCTGTTTAAGAAGAAACGCTCCCTTCTTAACAGCCACATTCTCCATCTCACTTTTTCCTTGGTGGGAACTGTTGACAGTGGACATGAGACTTCCATTATTCCAAATTCAACAGCTTTCCAGGATCTACTTTGTGATTTTGAAGTCTGGCTCCATGCTCCATATGAACTTCATCTCTCCCTATTTGAACACTTTATTGAATTGCTCACAGAGTCCAGTGAAGCTTCAAAGAATGCCAAGTTGATGAGGGAATTCCAGCTAATCCCAAAGCTGCTACTGACTCTTCGAGATATGTCTCTATCCCAGCCTACCATTGCTGCTATTAGTAACGTGCTGAGCTTCTTACTGCAGGGTTTTCCCAACAGCAATGATCTACTCAGGTTTGGCCAGTTCATTTCTTCTACTTTACCAACCTTTGCAGTTTGTGAGAAGTTTGTAGTTATGGAAATAAACCACGAAGAGAAGCCTGACACTGGAACTGAAGAAGAGTTTGGAGGTCTTGTATCTGCTAATCTTATACTTTTGAGGAACAGACTTCTGGATATCTTACTAAAACTGGTTTACACATCTAAAGAAAAGACAAGCATTAATTTGCAAGCTTGTGAAGAGCTGGTCAGGACGCTGGGCTTTGACTGGATTATGATGTTTATGGAAGAACACTTGCATTCTACCACAGTCACAGCAGCCATGAGGATTCTTGTTGTCCTACTGAGTAATCAGTCTATTCTCATCAAGTTCAAGGAGGGACTCAGTGGTGGAGGCTGGCTGGAGCAGACAGATTCTGTCTTAACGAATAAGATCGGAACTGTATTAGGATTCAATGTGGGCAGGAGTGCTGGCGGACGATCAACTGTCAGGGAGATTAACCGGGATGCTTGTCACTTTCCTGGCTTTCCGGTGCTTCAGTCATTCCTTCCTAAACACACTAATGTCCCTGCTCTCTATTTCCTCCTCATGGCATTGTTTCTGCAGCAGCCCGTTAGTGAGCTGCCTGAGAACCTGCAGGTCAGTGTGCCTGTCGTCAGCAGCCGATGTAAGCAGGGTTGCCAGTTTGATTTAGATTCCATCTGGACCTTTATCTTTGGAGTTCCTGCCTCCAGTGGAACCGTGGTCTCATCTATCCACAATGTGTGCACAGAAGCTGCTTTTTTGTTACTGGGCATGCTCCGAAGCATGCTGAATTCACCTTGGCAATCAGAAGAAGAGGGGTCTTGGCTCCGGGAGTATCCTGTGACCCTGATGCAGTTCTTCAGATACTTGTATCACAATGTCCCGGACCTGGCCTCCATGTGGATGAACCCTGATTTCCTGTGTGCACTTGCAGCCACGGTCTTCCCCTTCAACATCCGCCCTTATTCAGAAATGGTGACTGATCTCGATGATGAAGTTGGATCTCCAGCTGAAGAATTTAAAGCCTTTGCAGCAGACACAGGGATGAACAGAAGCCAATCAGAGTACTGCAACGTGGGCGTCAAGACATACCTGACTAATCACCCAGCTAAGAAATTTGTTTTTGACTTCATGCGGGTCTTAATAATAGACAACCTCTGTCTTACACCTGCCAGCAAGCAGACTCCACTGATTGATCTTTTGTTGGAGGCTTCTCCTGAGAGATCGACAAGAACGCAGCAAAAAGAATTTCAGACTTACATTTTGGATAGTGTGATGGATCATTTGCTTGCAGCTGATGTTTTACTGGGAGAAGATGCATCTCTTCCTATCACCAGTGGAGGAAGCTACCAGGTATTGGTGAACAATGTGTTTTATTTCACACAACGTGTGGTGGACAAGCTTTGGCAAGGCATGTTCAACAAAGAATCTAAACTTCTTATAGATTTTATAATTCAACTAATTGCACAGTCAAAGAGAAGATCCCAGGGGTTGTCACTGGATGCAGTCTATCACTGCCTCAACAGGACTATCCTGTACCAGTTCTCCCGGGCGCACAAAACCGTCCCGCAGCAAGTAGCCCTTCTTGACTCTCTCAGGGTCCTGACTGTCAACAGGAACTTGATCCTGGGCCCCGGAAACCACGACCAAGAATTCATCAGCTGTCTGGCTCACTGCCTCATTAACCTGCATGTTGGGAGCAATGTGGATGGATTTGGACTGGAAGCAGAAGCCCGCATGACTACATGGCATATTATGATCCCCTCGGACATTGAACCAGATGGTGGTTACAGCCAAGATATTAGTGAAGGGCGTCAGCTTCTCATAAAAGCTGTCAACAGAGTTTGGACGGAATTAATTCATAGTAAGAAACAAGTCTTGGAGGAGCTTTTCAAAGTCACTCTACCTGTGAATGAAAGAGGCCACGTGGACATAGCTATAGCAAGGCCGCTCATCGAAGAAGCTAGTTTGAAGTGCTGGCAGAATCATCTAGCCCATGAAAAGAAGTGCATAAGTCGAGGAGAAGCTTTAATGCCCACCACACAATCCAAATTGTCCCGTGTCAGCAGTGGCTTTGGTCTTTCCAAGTTAACGGGATCAAGAAGGAATCGAAAGGAAAGCGGGCTTCATAAACACAGCCTTTCCACCCAGGAGATTTCTCAGTGGATGTTTACACACATCGCTGTTGTTCGTGACTTGGTAGACACACAATATAAGGAATACCAGGAGCGTCAGCAAAATGCCCTGAAGTACGTGACGGAAGAGTGGTGCCAGATCGAGTATGAGCTGCTGCGGGAGCGGGGACTCTGGGGCCCCCCCATTGGTTCCCATCTCGACAAGTGGATGTTGGAGATGACAGAGGGTCCCTGCAGAATGAGGAAAAAAATGGTGCGAAATGATATGTTTTATAACCATTACCCTTACGTGCCAGAAACGGAGCAGGAAACCAACGTGGCGTCTGAGATCCCAAGTAAACAGCCTGAGACACCTGATGATATCATTCCTCAAAAGAAGCCTGCTCGATACAGAAGAGCCGTAAGTTATGACAGTAAAGAATACTACATGCGACTAGCCTCCGGCAACCCAGCCATTGTGCAGGATGCCATCGTAGAGAGCTCTGAAGGAGAAGCTGCTCAGCAAGAACCAGAACATGGTGAAGACACGATTGCTAAAGTCAAAGGACTGGTCAAGCCACCTCTCAAACGGTCTCGGTCAGCACCGGACGGAGGCGATGAGGAGACACAGGAGCAGTTACAGGACCAGACAGCTGAGGGCAGCTCGATAGAAGAGGAGGAGAAAACAGACAACGCCACCCTGCTGCGCCTGTTGGAGGAGGGCGAAAAGATCCAGCACATGTACCGCTGTGCTCGAGTCCAGGGCCTTGATACCAGTGAGGGGCTACTCCTCTTTGGTAAAGAGCATTTCTATGTGATTGATGGATTTACAATGACAGCAACCAGAGAAATAAGAGATATTGAAACCTTACCTCCAAATATGCATGAGCCGATTATCCCTAGAGGAGCCAGGCAAGGCCCCAGTCAGCTCAAGAGAACGTGCAGTATCTTTGCATATGAAGATATCAAGGAAGTGCATAAACGGAGATATCTCCTGCAGCCTATCGCTGTGGAAGTTTTCTCTGGAGATGGACGAAACTACCTCCTTGCTTTTCAGAAAGGAATCAGAAACAAAGTTTATCAAAGGTTTTTGGCTGTAGTGCCATCTCTCACTGACAGTTCAGAGTCTGTGTCTGGGCAGCGGCCGAACACCAGCGTGGAGCAGGGATCTGGGTTGCTTAGCACTCTGGTTGGAGAGAAGTCTGTGACTCAGAGATGGGAGAGAGGTGAAATCAGCAACTTTCAGTATTTGATGCACTTGAACACTTTGGCTGGAAGATCGTATAATGACCTCATGCAATATCCTGTCTTCCCCTGGATCCTTGCAGATTACGACTCGGAGGAGGTCGATCTTACTAATCCCAAGACATTTAGAAACCTGGCCAAGCCAATGGGAGCACAGACAGATGAACGATTAGCTCAGTATAAGAAGCGATATAAAGACTGGGAAGATCCTAATGGAGAAACTCCAGCCTACCACTATGGGACCCACTATTCATCAGCCATGATTGTGGCTTCATACCTTGTCAGAATGGAGCCCTTCACACAGATATTCCTAAGGCTACAGGGAGGCCACTTTGACCTGGCTGACCGGATGTTTCACAGCGTGCGTGAGGCCTGGTACTCAGCGTCAAAGCACAACATGGCAGATGTAAAGGAACTCATCCCAGAATTTTTTTACTTACCAGAGTTCCTGTTCAATTCCAACAACTTTGACCTTGGCTGTAAACAAAACGGCACCAAACTTGGAGATGTTATCCTTCCACCCTGGGCAAAAGGGGACCCACGAGAATTCATCCGGGTGCACCGTGAGGCTCTGGAATGTGACTACGTGAGTGCCCATCTGCATGAGTGGATCGACTTAATCTTCGGCTATAAGCAGCAAGGTCCTGCCGCAGTAGAAGCTGTAAACGTCTTCCATCACCTTTTCTATGAGGGTCAAGTGGATATCTACAACATAAATGACCCCCTCAAGGAAACAGCCACCATAGGGTTCATTAATAACTTTGGGCAGATCCCTAAACAGTTATTTAAAAAACCTCATCCACCCAAGCGAGTGAGGAGTCGACTCAACGGAGACAATGCGGGGGCCTCCGTCCCGCCAGGGTCTGCCAGTGACAAGATCTTTTTTCATCATCTGGACAACCTGAGGCCTTCACTAACACCTGTAAAAGAACTCAAAGAGCCTGTGGGACAAATCGTGTGTACAGACAAAGGCATTCTTGCGGTAGAACAGAATAAGGTTCTTATCCCACCAACCTGGAACAAGACTTTCGCCTGGGGCTACGCAGACCTCAGCTGCAGGCTGGGGACCTATGAGTCAGACAAGGCAGTGACTGTTTATGAATGTTTGTCGGAGTGGGGCCAGATTCTCTGTGCGATCTGCCCCAACCCCAAGCTGGTCATCACGGGTGGAACAAGTACGGTGGTGTGTGTTTGGGAGATGAGTACCTCGAAAGAAAAGGCTAAGACTCTCACTCTCAAACAGGCCTTACTTGGCCACACGGATACGGTTACCTGTGCCACCGCGTCGTTAGCCTATCACATCATCGTCAGCGGGTCCCGAGACCGAACCTGCATCATCTGGGACCTGAACAAGCTGTCATTCCTAACCCAGCTCCGAGGCCACCGGGCTCCCGTGTCTGCTCTGTGTATCAATGAATTAACCGGGGACATCGTGTCCTGCGCCGGCACGTACATCCATGTGTGGAGCATAAACGGGAACCCCGTCGTGAGTGTGAACACGTTCACAGGCAGGAGCCAGCAGATCGTCTGTTGCTGTGTGTCGGAGATGAACGAGTGGGACACGCAGAACGTCATCGTCACGGGACACTCGGATGGCGTGGTCCGGTTTTGGAGAATGGAATTTTTGCAAGTTCCTGAAACACCAGCCCCTGAGCCTGCTGAAGTCCTCGAAATGCAGGAAGACTGTCCAGAAGCACAAATCGGGCAAGAAGCCCAGGACGAGGACAGTAGCGATTCCGAGGCCGACGAGCAGAGCGTCAGCCAGGACCCCAAGGACACGCCCAGCCAGCCCAGCAGCACCAGCCACCGGCCCCGGGCAGCCTCCTGCAGAGCCACAGCCACCTGGTATAACGACAGTGGCTCCGACGACTCCAGGCGCTGGTCCGATCAGCTCAGCCTCGATGAGAAAGACGGCTTCATATTTGTGAACTATTCAGAGGGCCAGAGCAGACCTCATCTTCAGACTCCCCTTAACCACCCCCACCCCAATCCCATCGAGGCGCGGAATTACAGCCGATTGAAGCCTGGGTACCGCTGGGAACGGCAGCTCGTGTTCAGGAGTAAGCTGACCATGCACACGGCCTTTGACCGGAAGGACAATGCTCACCCTGCCGAGATCACTGCATTGGGCGTCTCCAAGGACCACAGCAGGATCCTCGTGGGCGACAGTCGGGGCCGGGTGTTCAGCTGGTCTGTGAGCGACCAGCCCGGCCGCTCTGCCGCTGACCACTGGGTGAAGGACGAAGGAGGGGACAGCTGTTCAGGCTGCTCCGTGCGGTTCTCTCTCACGGAAAGACGGCACCATTGCAGGAACTGTGGTCAGCTCTTCTGCCAGAAGTGCAGCCGATTTCAGTCAGAAATCAAGCGCTTGAAAATCTCCTCCCCAGTACGTGTCTGTCAGAACTGTTACTACAACTTACAGCATGAGCGGAGTTCAGAAGACGGGCCTCGGAATTGCTGAAGATTCACCCAGCTGATTGGAGACCACAGTCGCGAGACCCCGCTTCCCGCCTCCCCCGTCACAACTCGCAGCTCGGAGGGCATCGAAACAGTCTCCGTTTACACATCTCTTCACACCGTGCATCTGAAGTGTGGGATTCAAAGGGAACACTGACTAGACGGGCATAGAGTCCAGTCGTGGGGCAGGCACTGTGCAGATGGGCAGCACCTGCCGAGAAGACGAGGTGGTTCCCAGGAGCAACGTCTCAATATCCGACTCTCCCTTAACAGTCGCTGTCTCCAAGAGAAAATCCTCACGTATTAACTGTTCTTTTCTTGCGTCTCGTTTTTGTAGAGCTACTCATCCTCAATTGGAAAAATCAACGACTACAAAAAAAAAGAAGGCTTTTAGAAAACGGTTGTAAATCTGACTTCTTTGCAAGTAACTGTGTATATTGTAAATAGGTACAAAGGCCTTTTTTCTAAATAAGGACTTAACAGCCTGTAACATGAGACTTCCAACTAAACCACTAATTCAATGAAATACTTATGGTTTGTCTGACATCGCTCACCAATTAATTATAAATATGTTTTTTTTTAAATCCTCAAAGACATTATCTGTGGTCTTTTTTCCTTCCCCCTTTCAAGCCCAGCCCGTGTGCCCGATGTCCTTTCTCAAGTTGCCCACGGTATCTCCACTTAACCTAAGCTAGTAACCAAAACAATGTCATGTGGACCTTCTTTAGGAAACAGTGTGGGAGAATAGGAGTCTGGCCCTGAGATACCCTGGCGATCTTTGGGCATCTTGCACATGGCCACATACCACCTCGATGTTGTTCTGATGTCATGAGGCCCCACGTAGACTTCTCTTTGGACTGCCCTGTGGTCAAAGCATCCGTTCTTAGCACTGCGCCCTGATGGTCGGGCAATCCACGCAGTGCAGGAAACAGCCCTGCCTCAACTAATGGAAATATATTTGCATGTAACCCAAATTAGCTTCTCTTGCATAGAACATAAGAAGTATGTGTCTTTGGTGACACTAATGTTCTACTATAGCTTATTTTCCAAAAAAGGGTTAAAACAAAAGAAAAAAGTGTACAGAATTAACATGTAAACCTTGTTGTAAAACTGGATCATGTCAGAACTGCTTATATTTAACCTTTACCATTTAATGCCATCTACCTGAAAACAGTGAGATTTATACCGTATCAATGTCTATTTTTTTGTTTTTGCTATGAATATAATTACAGTATTTTAATATTTAGTTATTTAATTTGTTCTACTAGTTGGATACAGAACACACAAATCCAGGGAGACTAAAGCTGGTGGGGGTGAAGAGATAAGTTTCGTTTACAGAAAAAAAAGGCTTTGGTGGTGGGATTTTTTAAAATGTGTGTTATGTACATATATAAATATATATATAAAACAAATGAAACGATTAATCTAGATTTTAACATTTTCAGATATTTAGTGATAATATTATGAACAAATCTAAAAGCCCTGTGATTTGAAAAACATTGAAGCATTTATGGCCCAGGAAAGGAAGGACAGGCCTTCACACCTCTCGGAGTATCACACGAAGGACAGCGGCTTTGGCATTCCCGATTTTTCATCTTTAGGCCCTGGTGACAGGCACACTTATGCACTAAAATGCACATATATGCACATGCATTCAAGCATAGGCATTGGTACAACAGTAACCTTGTACCTAATGGGCTGAAACCAGCTTAAGAACAAATTTGTTCTTCCTGATAACTAGGTCTCCAAGAGAAAAATATAAAGGCTGCTTTAGTGCCTTATGCTTACTAAATTTACACCTTTATTTACTTAGGTTTGAGCCTACCGTCTATTTATGATTACATATCAAAATTGAGGAAAACACTTCCATTTCTAAAAGTTCAAGTATACTTGTTAATAAAAGGATTATTGGCATTAATACTTTAACTTGAAGAAGAGTTGTGTTCTGTTTTCCTTCCTGTGTCTCCCTCTCTCCCATCTTCCTCCCCCTCCGCCCCCAACCTTCTTCCTTCAGTTCTAATAAATAATGCTGGGTGTTCAGCAGTTGCAGGACTTGTGCTCTCACCTAGCCGTGGGCTTTGCCCCTGTCCGGACCTAGAGATGAGTTGTAGCAGTGTTATTCTACACTTTTTAAAAGAGGCGTCCTCCTTGTGTCCACGAACCATGTTTACCCCAAACCCAATGGCAGAGATGTTCTTTAAAGACTTGAATATATGAATGTCTGTACGTAGTTACTTAAAGGTTATTCCTCTATGTAATATGAAGTTATATGAGATGAACACTTTTAAACTTTCGGACACAACTCCCATAACTAGAAGGTGGAAACCAAAACCCTCATGATAGTATTTCCTCTGGCAGCTGGTGCTGTGGGCAACCGTTTTTGTTCAGTGGGGTTTCTTTTCCTTTTTGCTTTTAATGCAGAAATCACAAATCACTCACACACCCAAGAACACTCACTCACATAAACTAATCGTTTCTCTGGATGTCTTTCTGTGCTCCATGTACATTTGTTTACCAACATATATTCTCAGCATGTACACCCACCTTTGTGTGGTCCATGCTCTTTCTCTGAGAGTACCTCACAGGGCTTCTGCCTGATCTTTGTAGTGGTTTGTCCATCCATCCACTCATTCATCCATGTTTTCTAACATTTGTGTGTAGTGTGGCATGATAATGTCATGCTTTTGAAGAGGAGACTAGCTGCCCACAGCAGCCATCCGTCTGGATAATAGCAAAACACTCTAGATAAGTTATTTTGCACTTTCTTATGTATAAAGTTGGTAGAAACTTATTTTTGCTTTGTATCATTTAAATACATTTTGTTTGGGTAAATGAACTGTGTATAAAATATTTATGCCATTAAAACTGTTTTTAGAAAGTATTTTTAATTTCAGCAAGTTTGGTTACTTGTTGCATGACTATTAACACAGCTGACTTTTTGTGTCAGTGCAATGTATATTTTTTTGTCCTGTTATTAACTTGTAAGCCCTAGTAATGGCCGATTATTTGTACAGCAACAGAAGTAAATTGAAGATACTGGCTAAGACTGGATTGACTGTGGACTTTTGTACTATATCGCAGAATCCAATATCTGTTCTTTGGTGGTTATGTAAAAGGCCTGAAGAATTACTCTCTTAGTGTGCAATCTGTGATAACTGAATGTTCATTGTATATCTGTCTCTGATGCAAAAAGGTAGAGTAACACAATTACAATACATGATTAAATGCAGTAGTCCAGA EMBV3_14381 CTTTTAACAAATAATTCCGGGACAACCAACAGCCACGTGAAAAAGAATGAAGTTGGACCC Gene BVV0102_306577 + 0 NULL GK000030.2:16755372-16857811 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39525 ACTGGCCACTGCTGACGACTTCCTTGTCTTCCTGCACAAGGACCTCCCTGGGGAGCTGGT Variant GeneID:533578|NUDT22:NM_001038680:57_cdna 455^550 3 EMBV3_37370 GeneID:533578 29 GENE NUDT22 MGC134340 nudix (nucleoside diphosphate linked moiety X)-type motif 22 EMBV3_37747 GCACTGGATCCACCCTGTAAATATTCTTAAATATACATTTCAACCACTGTTTGTTTTTTC Gene GeneID:538831|LOC538831:XM_002690951:304_cdna Constitutive 2 NULL GeneID:538831 10 GENE LOC538831 NULL similar to CG11877 CG11877-PA EMBV3_35408 AAAACATCAATTCCCACTACCAAGGAATGGTGATCTCGAGGCCTGAAGGAAAGGGAGCCC Gene GeneID:527172|TTC39A:XM_002686362:132_cdna Constitutive 0 NULL GeneID:527172 3 GENE TTC39A NULL tetratricopeptide repeat domain 39A EMBV3_23794 CAGCCGGCACCAACTCCCACACAGACTGTGTTTTGATTTGTAGCAGAGAAAGGTGGTGAA Gene BVT0101_068515 + 1 EMBV3_14765 GK000018.2:14003633-14053450 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088586 1 XLOC_053373 NonCoding TCONS_00088586 XLOC_053373 NonCoding NonCoding - 18:14038480-14039448 - TSS65932 968 2 TCONS_00088586_2 78 0.134297520661157 1 0 0.00105415937593195 1.03806059155069e-05 9.55991849630058e-05 0 8.16062907983557e-05 7.39060835515826e-06 0 0 0 0 0 0 0 0 0 0 0 0 0.000844509640556993 0.000111437439151771 0 0 0 0 7.87327711816813e-05 7.27837545442785e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.0122089054984846 0.929564198061735 0.000986490883981589 0.984274072913148 CCACTTGTTTTGCTGCAGCCCACAAGCTAGGAGTGGTGTTTACATTTTTTAATAGCTGGAAAAAATATCAGAAGAGTTGATGATGTGAAAATATTTACCATCCAGCTCATCAGAGAAAAGTCTGCTGACCCTGAACAAGGAGACTGCACCGTGGAGGGAGGCATGCCCCTTCAGGAGGGAGGCCCCTCTCGCACAGGCCAACCCGATTCCCCTCGTGTCTTCGGAGTCTAAGGAGAATGCAGGTGTGCTGCAGGCCGTCAGAGGCAAGCCTGCAGTGAGAAGGTTACGGACTTTTGAGCCCAACCTCCAGCTGGGTCTCTTCTCCTGGCTTGGTAACGTGTGTTTTCCCAAGGCGAGAGGAGAAGGACAGGCCGGCTGACCCTGCGCTCTTCCCAGCACATCCTGGGCTGTTCTGTCCACACAAGGCTGACTCAGACCCTCCTCCCTGACCTCAATGGTTTTCATTGATTCCTGTCCTGAAAATTTCCCCAAGTTTCACCACCTTTCTCTGCTACAAATCAAAACACAGTCTGTGTGGGAGTTGGTGCCGGCTGCTCTGGGCCCCCATATTCCTGGCCCACTGGAGCCCACACCCACCTATGACAGAAGTGGGCAGAGTCCACCTGGAGAGATTTAAGAGGCTCTGCAAAGGCTTTCAGAGTAAAACCACCAACACCCACCACGGTCTGACGGATTTCCACCCAACAGGCAGACTCACAGTGCAAACCATTCCCTGTTTCTCTGAATTAATCAGACCACTCTTCAGTTCACACCCAGTAGAGGCAGCAGCCCCAGAGGAGGGAGCTGGGGACAGAGGGCTGGCGTGTGAAGGGTGAAAGGAGGCTCCGGCACTCTGCCCTGGGCACAGGGAGGCCAGGAGGGGTGCAAAGGGGAGGGGCCTTGAACAACAAGAACCACAGCTAGAGCTTTCCGGAAGGGGCGCAGATGACAGCTCAAGCTGGAGACAC TCONS_00085493 TCONS_00085494 . 3' 794 TCONS_00085493 TCONS_00085494 . 3' 1761 EMBV3_02737 TATTACCAGTTATTGGTCACCCGGTTCCAGTTCAAATTGCCTTAATATTTGGTTCAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13446 AGTGGGCACTGTGTTGAGAATTCGTGGTTTAGTCCCCGACAAGGCTGGCAGGTTCTACGT Gene GeneID:787811|LGALS7:XM_002694975:144_cdna Constitutive 0 NULL GeneID:787811 18 GENE LGALS7 NULL similar to lectin, galactose binding, soluble 7 EMBV3_31484 GAAGGATGAAGACGTTTTGGCGGCGTGATTCCAGGGCCACTGCAGCAGATTTTACCAAAA Gene GeneID:768331|NMS:NM_001077522:104_cdna Constitutive 0 NULL GeneID:768331 11 GENE NMS MGC152110 neuromedin S EMBV3_12413 CCCCCAGCGCGCCCAGCTTCTGCGGATCAGCCCAGAAGGCTCTTTGTTCTGGATAAACCC Variant GeneID:281780|GGTA1:NM_177511:24_cdna 251^550 6 EMBV3_27800 GeneID:281780 11 GENE GGTA1 NULL alpha-galactosyltransferase 1 (glycoprotein) EMBV3_20007 CTTATGGGATCAATAAAAGCAATGCCAGGAAGTAAGTTTATAGCAATACAAGTCTATTGC Gene BVV0102_200832 + 0 NULL GK000017.2:1819994-1907140 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22434 AAGCCCGGCATGCTGCAGTTCATGGGATCGCAAAGAGTCGGGCATGACTAAGCAACTGAA Gene BVV0102_181174 + 1 EMBV3_19370 GK000018.2:62024020-62028037 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008634 TCONS_00162106 2 XLOC_004191 XLOC_098988 NonCoding TCONS_00008634 XLOC_004191 NonCoding NonCoding - 1:74809296-74810378 - TSS5711 1082 2 TCONS_00008634_3 57 0.77818853974122 1 0 0 0 4.27634099088413e-06 0 0 0 0 0.000191326224293397 0 0 0 9.91411331557087e-06 2.6518307128623e-06 6.08650010927295e-05 9.06873567271832e-05 6.10249153592739e-06 0 0 0 0 0 0 0 7.74704483105696e-05 0 2.17051532579454e-06 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 5e-176 621 86.84 0.463955637707948 0 noncoding GTAAACTCATCAGATAGCATATTAAAAAGCAGAGATATTACTTTGCCAAGAAATGTCCATCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATAGATGTGAGAGTTGGACTGTAAAGAAAGCTGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGGAGGTTCTTGTGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTGCATCCTAAAGGATATCAGTCCTGGGTGTTCATTGGAAGGACTGATGCTGAGGCTGAAACTCCAATACTTTGGCCACCTCATGGGAAGAGTTGACTCATTGGAAAACACCCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGGGACAACATAGCATGAGAAATCTAATCACTTACTAATCTAATCAGCAACTGGATGCACATGAGTGTGGGTGAACTCCAGGAGTTGGTGATGGACAGGGAGGCCCGGCATGCTGCAATTCATGGGGTCTCAAAGAGTCGGGCATGACTGAGCAACTGAACTGAGCTGAACTGAAACTCATCAGAGGAATGGTGGCGGTGGTTGTGGTGGTTTAGTCACCAAGTCGTTCATGTTTGACTCTTGCAACTCCATAGACTATCGCCCACCAGTCTGCTCTGTCAATGGGATTTCCTAGGCAAGAATATTGGAGTGGGTTGCCATTTTCTTCTCCAGGGGATCTTTCCCACCCAGGGATCAAAGCCAAGTCTCTTTCATTGCAGGCAGTCTGGTGCATTGAAGGTAGGTTCTTTACAGCTGAGCTGCCAAGGCTTCCCCATCAGGGGAATAGGGGGTAGTAATACAGTATTATTTATAGTTTAGCCCTGGTGGTCTGGTTTTCCACAGTGGTGTTCTTTAGGAAAATCAAATTAAGTACAATGTCTAAAATATAGGAATTTCTACAAAAAGGTCAAACTGAATACAATGCCTGATGAGATAGCCAACAATTTATCCATCCACCTGTTGATGGATATTTGGGTTGTTTCCAGTTTGGGGATATTACCAATAAAGCTTCTGTGAACATTCATGTACAAGTCTTCGTGTATGCTTTCTTTTTTCTTGGGTAAATAACTAG TCONS_00004044 . 5' 15630 TCONS_00004044 . 5' 15630 EMBV3_16288 TTTGGGCACAGGCCTACAGGAATGAGGTCTGGGATAGGAGAGAGACCTCCTCTTTATTGT Gene GeneID:524796|ZFP37:XM_002689934:84_cdna UTR3_Alt 1 NULL GeneID:524796 8 GENE ZFP37 NULL zinc finger protein 37 homolog (mouse) EMBV3_10687 GTGCCCATCTTGGGCCTGGGCACCTGGAAATTGTGGCCCACCTTCATGGAGAAGCATCTA Variant GeneID:525193|AKR1B10:NM_001102088:17_cdna 160^327 1 EMBV3_34291 GeneID:525193 4 GENE AKR1B10 MGC179497 aldo-keto reductase family 1, member B10 (aldose reductase) EMBV3_22580 CCCAGAGAAGTGAGGATGGTCTGTGGCAGCCAAGCTGCTGCTAAACTTGTGTAACTGCAG Gene BVV0102_202938 + 0 NULL GK000015.2:45418099-45443452 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12782 CACTACAAGTACTGCAGGGAGATTCGGGGCCCAAGCTGCTGTGAATCCATCAACTCAAAA Gene BVT0102_005722 + 0 NULL GK000011.2:36913567-37030008 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027535 TCONS_00027541 TCONS_00027540 1 XLOC_015273 NonCoding TCONS_00027540 XLOC_015273 NonCoding NonCoding - 11:36951797-36954282 - TSS19487 876 1 TCONS_00027540_1 70 3 0.648550724637681 0.00597507831823781 0.00416093291462961 0.00347218748128699 0.00520852799654821 0.00143154093950301 0.000428040390592135 0.00132403105693872 0.00553596250586145 0.00199113498296409 0.000265784379745398 0.00116549783904882 0.000244344187423535 0.001038510004979 0.00197843703598314 0.000518350248096157 0 0 0 0.00247284196304939 0.00692896306990252 0.0031911162651358 0 0.000565523154533385 0 0.00177901466162643 0.00853442022559254 9.71400703995293e-05 0.000605214663569377 7.74438495646857e-60 0.000343164678559211 0 noncoding 0 0 0 0 -0.361140039678568 0.169131907226596 -0.0130423435366206 0.802303920453177 TTACCTATACTCAGGTTTTTAAATGAACATTTGGCCACATTTGCTTCCAATTTAAAAACAAGAAAAGGCAGGCAGGGAGGCAGGAAGGCAGGTAGAAAGAAGGGAGGGAGCCAGGAAGGGAAGGAAGAGGGGAAGGAAGCAAGGAAAACATCTAGTTGCAGTTGAAATGCCTTCCCAATCTCATGTGAGAAGATAATTACCACTCCTCAAAGGTGTATGCCAAAGCACTCATCATTGGCTCCAGCCCAGCTCACTACAAGTACTGCAGGGAGATTCGGGGCCCAAGCTGCTGTGAATCCATCAACTCAAAATCATTTCCACTGTGTTTTGCTGTGTTTTGGTTCCATGGAGGATCCTTTGGCTCTGACTACCTTAGATCCCATTCTCCAGGGCACCTATGAGCTCCCCTCAGCTGCAGAGCCTTCTTGAAGGTTAGGCCAGAGGCCTCCTGCACACATCACAGGGGAACGGATGTTCTTGGGTGATGCTGGGTCTCCATGGACAAACTGTTGCCACATTTGCCTCTCAGTCCACTCCATCCCTTTCTCTAGGGCAAGGGACATGGTTTCCTCTTTGCATTGGTAGACTGTTCAAATGCAGTTCCAGGGCTCCTTGGGGTACATGGGCTTGAGATAACTGGACTGTTTCTAAAAAGACGTGTGACTAAACCCTTGAAAGGAAATGTCTGCCGATGGGAACGACTAGGCTCTCCCTCCATACTGTTTGACACTGCCAGGTTGATTACAGGAGGCCCGCAGGCTCACTTTCCCCACGAGCCACCTCCCAGGTCTGCTGACTTAGGGTCTATTCCTCCCTCAACAGCATTAATTTAAAAATTCTACTCAGCCACACTATTTAGCCTCTTCCCATGCTAGG TCONS_00024680 r 3' 38232 TCONS_00024680 r 3' 38815 EMBV3_15003 TGTGCCATGTTATAGCCGTGAACCCTTCTAGCAAGTTACCCCATGACTGGGAGGTACTAC Gene BVV0102_150714 - 1 EMBV3_30065 GK000012.2:2695363-3435968 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04306 GGAGGTGTCTCCGAGCGGCTCCTCCGGGCTCAGTGTCTATAGAAGCTGAGGTCCATCAAT Variant GeneID:511554|C24H18orf19:NM_001080259:83_cdna 82^557 3 EMBV3_14259 GeneID:511554 24 GENE C24H18orf19 C18orf19 MGC143384 chromosome 18 open reading frame 19 ortholog EMBV3_23023 GTATATTGGACCTGATGATGCACAGCAAAAAATAGAACCTCATCACACAGCCGTGCTGGG Gene GeneID:790878|PIR:NM_001102358:44_cdna Constitutive 3 NULL GeneID:790878 X GENE PIR MGC160032 pirin (iron-binding nuclear protein) EMBV3_22794 TAGCTGTACATTTGCCTTTTTATTGAACACGTGAAGCTGTACTGTGGCTCATGCAATAGC Gene BVV0102_131620 + 0 NULL GK000007.2:11842289-11942159 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042183 TCONS_00042185 TCONS_00042182 1 XLOC_025615 Coding TCONS_00042182 XLOC_025615 Coding Coding ITGB1 13:20248721-20292117 = TSS31462 3823 1 TCONS_00042182_6 798 16 0.912270998963014 0.00672537049516408 0.00183140599076934 0.0045119780655352 0.00124984427530464 0.00165374067948281 0.000807995205813731 9.2420594189479e-05 0.000575103069745042 0.00172966141012654 3.90021486501375e-08 0.000153295451577894 0.000136795798506679 0.000108212443365376 0.000498113864065659 0.000168017053552891 0.0292448946847276 0.0115101659628139 0.0195972257616368 0.00430381010836941 0.00281988339015746 0.00360031997837539 0.00629021313438985 0.00745706233303554 0.0146933555317297 0.00653794111851785 0.00390904379494965 0.00121705816668425 0.00110025166829489 0.000689942227118594 0.00155578376089261 XM_005214148.1 ITGB1 PREDICTED: Bos taurus integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), transcript 0.0 4697 99.81 0.684279361757782 NM_002211.3 ITGB1 Homo sapiens integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), transcript 0.0 4558 87.13 0.977243002877321 TCONS_00042182_6 sp|P53712|ITB1_BOVIN ITB1_BOVIN Integrin beta-1; 0.0 1643 100.00 0.99874686716792 4 coding 0 0 0 0 1.69104680794143 0.0209698973425229 -0.126873466920979 0.0464534635840916 GGCGCGGCTGACGCGGCCCGAGAGGAATGCGCTTCCGGAGGGCGAGTGCCGCGGCGGCGGCCTGAGGAGCGGGATCGCAGCGCCAGGGAGGCGGTGCCCCGGGGGTCGTTTCCTGCCGGGAGGCGGCCCCGCGCCGCCGAGTCTCCTCCTCCCGCCCGCGAGGAGGAGGAGCCGCCGCCGCCGCCGCCGCCGCGCCCGAGCCCGGGAGGCCACGCCAGCTCGGGACAGGCCGAGCGGGAACCGCGGAGCACAGGCCGAGTTGACCGAGCGGGCCGGACGCCGCGGGAGAAGATGAATTTACAACTGATTTTCTGGATCGGATTGATCAGTTCAGTTTGCTGTGTGTTTGGCCAAGCAGATGAAAACAGATGTTTGAAAGCAAATGCCAAATCATGTGGGGAGTGTATACAAGCAGGGCCAAATTGTGGATGGTGCACAAATTCAACATTTTTACAAGAAGGTATGCCTACATCTGCTCGATGTGATGATTTAGAAGCCTTAAAAAAGAAGGGCTGTCATCCAAATGACATTGAAAATCCTAGAGGCTCCAAAGATATAAAGAAAAATAAAAATGTAACGAATCGAAGCAAAGGAACAGCAGAGAAGCTGCAGCCAGAAGATATCACTCAAATCCAGCCACAGCAGTTGGTTCTGCAGTTACGATCAGGGGAGCCACAGACATTCACACTAAAATTCAAGCGGGCTGAAGACTATCCCATTGATCTCTACTACCTCATGGACCTCTCCTATTCCATGAAAGACGACTTGGAGAATGTGAAAAGTCTGGGAACAGATTTGATGAATGAAATGAGGAGGATCACTTCAGACTTCCGAATTGGGTTTGGTTCTTTCGTGGAGAAAACTGTGATGCCTTACATTAGCACAACACCAGCTAAACTCAGGAACCCTTGCACAAATGAACAGAACTGCACGAGCCCATTTAGCTACAAAAATGTGCTCAGCCTTACTGATAAAGGGGAAGTATTTAATGAACTTGTTGGTAAGCAGCGCATATCTGGAAATTTGGATTCACCAGAAGGTGGCTTTGATGCAATCATGCAAGTCGCAGTTTGTGGATCCCTGATTGGTTGGAGGAATGTGACACGGCTGCTGGTGTTTTCCACGGATGCTGGGTTTCACTTCGCTGGAGATGGGAAACTTGGTGGCATCGTTTTACCGAATGATGGACAGTGTCACCTGGAAAATGATGTGTACACAATGAGCCATTATTACGATTATCCTTCTATTGCTCACCTTGTCCAGAAACTAAGCGAAAATAACATTCAGACGATTTTTGCAGTTACTGAAGAATTTCAGCCTGTTTACAAGGAACTGAAAAATTTGATCCCTAAGTCAGCGGTAGGAACATTATCTGCAAATTCCAGCAATGTGATTCAGTTGATCATCGATGCGTACAATTCCCTTTCTTCAGAAGTCATTTTGGAAAACAGCAAATTGCCGGAAGGAGTAACAATAAATTACAAGTCTTACTGCAAGAATGGGGTGAATGGAACAGGGGAAAATGGGAGAAAATGCTCTAATATTTCCATTGGGGATGAGGTTCAGTTTGAAATTAGCATAACTGCAAATAAATGTCCAAATAAGAACTCTGAAACCATTAAAATTAAGCCTCTGGGCTTCACTGAGGAAGTGGAGATTATCCTTCAGTTCATCTGTGAATGTGAGTGCCAGGGTGAAGGCATCCCAGGAAGCCCCAAGTGCCACGACGGCAACGGGACCTTCGAGTGTGGGGCCTGCAGGTGCAACGAGGGACGTGTCGGGAGACACTGTGAATGTAGCACAGATGAGGTGAACAGCGAAGACATGGATGCCTACTGCAGGAAAGAAAACAGTTCAGAAATCTGTAGCAACAATGGAGAGTGTGTCTGTGGACAGTGTGTGTGTAGGAAGAGGGACAATACAAATGAAATTTATTCTGGCAAATTCTGCGAGTGTGATAATTTCAACTGTGATAGATCCAATGGCTTAATATGTGGAGGAAATGGTGTTTGCAAGTGTCGAGTGTGTGAGTGCAACCCTAACTACACCGGCAGCGCCTGTGACTGTTCTCTGGATACCACTTCCTGCATGGCCGTGAATGGACAGATCTGCAATGGCCGCGGCGTCTGCGAGTGTGGTGCCTGTAAGTGTACAGACCCCAAGTTCCAAGGGCCAACCTGTGAGATGTGTCAGACCTGCCTTGGAGTCTGTGCTGAGCATAAAGAATGTGTTCAGTGCCGAGCCTTCAATAAAGGAGAGAAGAAAGACACATGTGCTCAGGAATGTTCACATTTCAACATTACCAAGGTTGAAAATCGGGACAAATTGCCCCAGCCAGGCCAGGTGGATCCCTTGTCCCACTGTAAGGAGAAGGACGTTGACGACTGCTGGTTCTACTTCACATACTCCGTGAATGGGAACAATGAGGCCACTGTTCATGTTGTAGAGACTCCAGAGTGCCCCACTGGTCCAGACATTATTCCAATTGTAGCAGGTGTGGTTGCTGGAATTGTTCTTATTGGCCTTGCATTGCTGCTGATTTGGAAGCTTTTAATGATCATTCATGACAGAAGGGAATTTGCCAAATTTGAGAAGGAAAAAATGAATGCCAAATGGGACACGGGTGAAAATCCTATTTACAAGAGTGCTGTGACAACTGTTGTTAATCCGAAGTACGAGGGGAAATGAGCACTGCCTGTGTGTACCCACAGCACTGCAGGCAAAGTAGTAATTCCACAGTCACAGTAAGAGAGCTTCAGGGCAGTGTCACCATGGTTCTCTCATGGGCAGGTTCTGAAAATGTACAATATGTATAATTTGAAATTTTTTTTATTATTTTGAAAATAATGTTATAACCAATGCCAGGGACTGACAAAAGACTTGAGACAGGATGGTTATCCTTGTCATCTAAGGTCACAATGTGCCTTTTTGACCTTTTCTCCTGGACTAGTGAAATCCAGCTCTTACTGGATTAAGCAGTATTTCTAGAGTGATTGAAAGGCAGTAGTTAACGAGGATGATATAAGATTTTCTGTTAAGTGTTAAACTGATTTCTAGCTTTGCAGACATGTCATTTTTCAGTTATACAGAATCCAAAGTAATGTCCTTCTAGCTAGTTTAGAATCGTTTTAATGTATTATTTTGCTATTTGCCTGTTAGATATGACTGATGACATACCTGAAAGATGAGTATGCTAGGAGTTACAGGTGTAAAATAGTGAAATATTTGATCTGCAAAGGCCATGGGGAAAGTCAGAGCTAGGAAGGGAAAACATAGCTTTAAAACCTGTGTGCCATTTTAAGAGTTACTTAATTTTGGTAACTTTTATGCCTTCTCTTTGTAAATTCAAGTCTTGGGAAATTTTCTGCAAAAAGTCCTTGATTTAGCATTATCTACATAAAGGCCTTAATTTACATAGTATTTGCTAAATTGAGGACCTCCGGGTGAATTTTATTTTATTCATTTTCTTTTTAAAGCCTGGTGCTTTTTATCACCTCTTCTAATGTATTTGTTTGCAATTTGGGGTAAGACTTTTAAAAAATCAGTACTTTTTCATCGATGTTTTAGCTGTACATTTGCCTTTTTATTGAACACGTGAAGTTGTACTGTGGCTCATGCAATAGCTATCACTTAAGCATTTCTTACTTTCCATTAGTGCTATAACAGACCACTGTATATTTACTTCTCACTGAGTTTCCTGTTTTGTTTCATACTATTCACCTTCTTATTTTAAGTGCCTTTTAATTTTAACAGTTCACTTTTTACAATGCTGTTTTAGTGAAGTTATTTATTAAATAAAGATGCTTAAAATATTTAAATCAGA EMBV3_17478 GCACCCAGGAATTTTACGTAGATTATAAACCCACCAACACGGAGACCAGCGAGATGCTGC Gene GeneID:538148|LRRTM3:NM_001103283:380_cdna Constitutive 0 NULL GeneID:538148 28 GENE LRRTM3 MGC139590 leucine rich repeat transmembrane neuronal 3 EMBV3_42932 AACTGGACTTTCTAAGGCAGTGTTGCTTTTGGGTTAAAGGAGAAAATGGATACCCTGTTG Gene BVT0102_092936 + 0 NULL GK000002.2:91548846-91558391 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105833 TCONS_00105839 TCONS_00105842 TCONS_00105835 TCONS_00105838 TCONS_00105834 TCONS_00105840 TCONS_00105843 TCONS_00105841 TCONS_00105837 TCONS_00105832 TCONS_00105831 TCONS_00105836 1 XLOC_062653 Coding TCONS_00105839 XLOC_062653 Coding Coding LOC538992 2:91555431-91613810 j TSS78000 4789 1 TCONS_00105839_2 482 13 0.91818835862825 0.00440650982637735 0.00320787750636846 1.31541237499502e-05 0.00299307235559991 0.000439576315750678 0.00193368324854562 0.00147341135980158 0.000765067463855038 0.00231580275703505 3.08704421055342e-21 2.38942077438426e-08 7.9810595191926e-10 2.19476481306127e-09 0.000451609654762201 2.22615532166436e-08 1.24449243863026e-09 0 3.44673077294863e-15 9.08098393606657e-06 4.00393777964161e-17 0.000574381682082671 4.18528235932876e-20 1.17925909257477e-13 1.54523255636158e-42 0.00050728045983325 4.26222557313985e-07 5.97156972907556e-06 1.82136461970457e-25 2.25466935194156e-17 1.36970644710678e-24 XM_005202687.1 ICA1L PREDICTED: Bos taurus islet cell autoantigen 1,69kDa-like (ICA1L), 0.0 8637 100.00 0.999791188139486 NM_138468.4 ICA1L Homo sapiens islet cell autoantigen 1,69kDa-like (ICA1L), 0.0 2482 79.77 0.568803508039257 TCONS_00105839_2 sp|Q8NDH6|ICA1L_HUMAN ICA1L_HUMAN Islet cell autoantigen 1-like protein; 0.0 818 84.06 0.99792531120332 2 coding 0 0 0 0 -1.04417777071734 0.00132558604987931 -0.0901428150743941 0.133336435049194 GTCATTTCATTTTATTAGAGGGATTCCGGAAAGGAGGAGCAGAGAGGGTCCCGGAGTTTCTTCAAGAACCAGCTAAGATCTGGGGCCTCCGTGGGTCGGGGTTAGGCGGGAGCCCGAGAGGCGTGAACGCGGAGGACGCTTGGCCGAGGCGCCGAGGGCAGCGCGGCTCCCGCGTGCGCCAGGCCGCAGCGTTTAAATCTCCCGCCTCCCGCGGCTGGAGCCCGACACCTCCACGCTCTGGTGCGGAGGGGCACCGGCTGCGGGAGAGCCCCGGCGGCGGCGGCGGCAGGAACAGGCACCGGGACCGACCCCCGCGCGGCTGAGCGGGACCCGAGGCGGCAGAGGACGTGCGCGTCGCGCCTCCGGCGTCGAGTCACTCCATGGATTTTTTTGGGCAGCACAGATCAGAAGATAACCAGTCAGTAGTCAGTAGAATGCAGAAGAAATACTGGAAAACCAAACAGGTCTTCATCAAAGCAACCGGAAAGAAGGAGGATGAGCACGTGGTGGCATCTGATGCTGAACTGGATGCTAAACTTGAGGTTTTTCACTCCATTCAAGAGACATGTACTGAACTTCTGAAGATAGTTGAGAAATATCAGCTAAGACTCAATGTTATATCGGAGGAAGAAAACGAACTAGGGCTCTTTTTAAAGTTCCAAGCAGAACGGGATACAACGCAGGCTGGGAAAATGATGGATGCCACTGGCAAGGCACTCTGTTCTTCAGCCAAGCAAAGATTGGCCCTGTATACTCCCCTGTCTCGACTTCAGCAAGAAGTAGCAACATTCAGTCAAAGGGCGATATCTGATACCTTGACGACAATTAATCGGATGGAGCAGGCGCGCACAGAATACAGAGGAGCCCTGCTGTGGATGAAAGATGTATCTCAAGAACTGGACCCAGACACCTTAAAACAAGTGGAAAAGTTCCGAAAAGTACAGATCCAAGTGAGAAATAGCAAAACTTCTTTTGACAAGTTAAAGATGGATGTTTGTCAAAAAGTGGATTTACTTGGAGCTAGTCGCTGCAACATGTTGTCTCATTCACTTGCTACCTACCAGAGAACACTGCTTGGATTCTGGGAGAAAACAGCTCGAATGATGTCCCAGATTCATGGGACCTGTATAGGCCTTCATCCATATGACTTTGTAGCTCTCAAGCAACTACAAGACACTCCAATGAAGCTTACTGAAGACCACAAGGAAGAACGAAGAGAAGACAGTTCTCTCCCTGAAAACCTCAATAGGTTAGTTTTGTCAGATGAGGAAGTGAACTTGGGAAGTGAACCAGCAACTGAAGATCATAAGGAAAAACATTCTGGAATAAAAGAATTTGTAGCACCTCAGTTTTCTGATTCTGAAAATGTTGCAAAAGATTTGCCAGTAGATTCATTGGAAGATGATTTTGAGAAGGAATTCTCGTTTCTGAACAGCCTTCTAAGTCCTGGTTGTTGGAGTGCTGGTGAATCTTCCCAGGAATGTCAGGCTGTCTTTGGAAGCCCCAAGGCCAGTCTCACGTGCCAGGAGCCTTCTGGGGGCTCTGAGCCTCTTGCTCACTCCGCAGGATTCCTTCCTTCACAGCTCTTTGACCTTGGCCTTCATGCTGCTGGAGCTTTCAACAGCTGGGCCTCCCATGGGGGATTAGAATTTCCTCTGTCACACATTGATAACCAGCCAGTGCCTTCACAGAGTCCAAAGAAATTAACAAAGTCTCCCAACAGTGGTAACCAAGACATGTCAGCCTGGTTCAATCTATTTGCAGACTTGGATCCACTTTCAAACCCAGATGCTATCGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTACGATGCCACTTCAATGGCCTTGAGACACCAGTTTTGCAACTTACTGCCTTAGTGAAAAGGAGTTTATGTTGTCACTCACATATGAAGACATTGTGTTTGCAAATTTAACACTTGACAGCCAACTTTAGACAGATGGTAAGGACCAACCACATTTTTATACATTAAGTGTCTATTTAATATCTTGGATTTGCAGCAGTTGGTAATATATGTAAAACTTTACAACACTATTGAGTCTGAAATTGATACCAAAACTTAGTAGGGATTGGGTTTATTTATTTGGAAAATCTTTTATGTATGAGTTGCCTTGCTGGCTGTGAGATTTCTATATATAGATAAAGGACAGCATGTAAACTGGGTTGTGATTTGAGGTTGGTTTTTAAATAAAACACTGGCAGGGGGGATTTTCTGTTGTGGAACATAGCACTAGAAACAAGACTAGTTTTGTCTTTAGAAAGGTAGAATAAGATTTGAGAACTCAGTTTTCTTTGATGAAATCACAGAGAAACTTGGTATTTGTTCTCTCCACTTGGAGGCTAAAATGTAGTATCTCAGTTCTTTTCCTTCATACAAAATCATGGACACCCTCCAATTTCATTATTGAATTTTTTGGGGAAAGTAGCAGGACGAGTTATTTGCTAAGTCCACCCTCTGTAGAAACAGAAAATTCTCTTCCCATCTTATAAACTACAGGACTGTCCAACAGTATTTCAGACGTTGTACTTCATTTTGTCTTCAGGCCTAAGTCTTCACACACTGCCGTCACAGTGCCCTGTATTCACACGCTGCCTGAAAGAAGACCAGGGAGGATACTCCCTGGGCAACTGGCAGTCGTATTCCTGCAACCACCCGGAAACGTCTACTTGAATGAGGGAAAAATCTGATTAACTCACCCTCGAACAGATGTGCAATACTTACCCAGTATTTCTTAACATGATATAACCCAGAATACTTTCTGGCACAGTTACAGAAAGCTCTATACCATCAGTAAAGCAGTCTTTCATTTTTCCACTTTTCTGTGGGTGACATCAGCTGAGGTTCTGTTTGATTACTAAGGACAAACTTACCCTTGGAAGGTTTAGAGTCTTAAGTATCAGAAGGCAGGTCCTTTAATGGAAGTTGAAGTATATGCTGATACAAGCACAGCCATTGTAGACACAGTCACTGTATGTCCTGTTCTTTCTTCCTGCCCAGCCTTAGTTCTGAGGCAGTTCACCCACTGTCCTGTTTCATCATCGTCCAGTCCATTGTATCTGCATAAGTGACCGTGTTCACGAACATGTTCACAGCAGATTTCACTATACTCCTAGTTCCAAGCAAGCTTAACTATTATTTACAGGAGAATTGCTTGTAATCTCTGAGTCACTGTATATAGAAAAAACATTTTCTTAGGAGTGACTAGGGCAGGTAAATCGCAGTCCACTTCCCATCCATAGCAGTCTGGCCTAACTACGATCTGAACCGCCCACAGGGTCTTTGGAAAACCACAACTGTGGTCAAGTAGTGGCTGGCTAGAAAGACCTTAACTGAGGGTCAGGAATATGGACTTAAAAGAGTCTGTAAAACTTTCCTTAAAATATTTTCACGTGCTTATTCATATTTACTTGGTTTAACCTTTAAGCATTTTGTAACTCTCCCTTTGTATTCAGTGACATTTGCCAGTGCAGTACATTGTTCCACCAAAATCCATCACCAGGGTCATGATTATGAATCACAATCTGAAGTCTATACCCATGGTCACTCTGAGCTCTCAACTTTGGGAGTACCTCAGAAAGTGTTAATTGTCTTGAGTTTTGCCATTTTTCTCTTATTAATTCTCACTAATGCATTAGTTAAAAAATACTTGAATAGCTCCCTCACATCCATGCAGAGCAGTCCTTGTTATGGCGTAAACAAAGAGGAAAACCAGTACTCTCCCTAGGCCTAAATCCCTGACAGTGGATGTAGGGGGGATACTGCCCCCCAGTTTTCCAAGAGCAAAGGTTATCAAAAAATAGAAACATATCAGAATTTTTATTATTCAGTTCTTAGTTTCTCTAACATTTTTGCTTTCAACAGAGTATCCATTTTCTCCTTTAACCCAAAAGCAACACTGCCTTAGAAAGTCCAGTTATAACTTCAGCAAGTCTAATGACTCCATTTTTGAAGTGCACATTTAAAACTTTATTTTTCCTCAAGGTTAGTTATTTGAAGCTCAATCATTAATTTAAGAGCCAGAAACAGAAATTTGGCTGTATTACACTTAAAATAGGTATAATAGCAAACCAAGCACATATTCAGTTGGGAGTGAAAGGAAAGGACAGGATAAACACAGAACAGAAAGGTGGTCAGTTGCTATTTGCTTAAATCTAGAACCACCATTCAATAAATAAATGAATTAACCTTAACCAAGGGTGAGCTGAGAACAACTCTTATCAAAATAAATGAATGCTTTTTATGTTGAGTGGGGGGGGATAGCTATCTTATACTTTTTAATAGCAGACAAAAATGCATTTAAACTTAGAAGAGCCCCCAGAAGAACTAAAATTTGCCTAATCTTTCTTCAACCAACTTTAGGGCAGATTAAGATCAAATTGGTGTGACTTTGTATTTTTTGAAATCTTTCATTAAGTGTAAAACATAACTCTGATATGATTAGAAACAACCTGTTTTAACAAAACAGGTTTCAGTATTTGCACAATGAAAAAGTGTTTGTATTTCAGACCATCTGGAAATGTAAAGGTCTTAACTGTGTACGAACAAAGGAAGTTTGAATGTGCTATTTTTCTGAGCCTCTTTTATTAATAATAAAACTATAAGATGGCATTAAAAAGTTTATTTTCTAAAGTGTTCAATACAAATCTAGTTGTTGTTTCCCTATTCAAAAACGTTGGTTTTTACCTCAGGACCATAGTAGTAAGAAGGTAGTTTGAATGATACAGATACCACAGAATGAAAATAAAACCAGGGCAATT EMBV3_19331 TTACTTTCCCCGAAGGACCTAAAGTTATACGATGCCCACGTGAACAGGAATGCCCTCCAC Gene GeneID:524320|EFCAB3:NM_001038141:257_cdna Constitutive 0 NULL GeneID:524320 19 GENE EFCAB3 MGC133761 EF-hand calcium binding domain 3 EMBV3_22006 GGTCACTTACCTATCAGCAGCAACCCCTCACCAGCCATTTGCCTGTTTTCCAGCTAACTT Gene BVT0102_120268 + 0 NULL GK000026.2:39581568-39585081 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150990 TCONS_00150994 TCONS_00150991 TCONS_00150993 1 XLOC_092000 Coding TCONS_00150990 XLOC_092000 Coding Coding NANOS1 26:39555022-39585172 j TSS112971 5083 1 TCONS_00150990_1 480 0.0120007869368483 11 0.831768881223258 0.0113820700038068 0.0107273604115826 0.00818680863189635 0.00919548217224077 0.0100215186778238 0.00421432080057414 0.00534072533896153 0.00613761034770839 0.00712744784115133 0.00208688897441362 0.00127093097537005 0.000965546579738597 0.000713190207197968 0.000124895998069837 0.00362251568441132 1.54408968158e-19 0.000712222575394185 7.63674619207652e-20 0.00761463510401233 0.0125868276794055 0.00716564706322724 0.000344957728815923 0.000908627704159187 0.000596198291627161 0.00859458670331126 0.0096388757689487 0.00503877380413936 3.72271130094925e-07 2.54446181712842e-17 0.000514749364633038 XM_001787922.2 NANOS1 PREDICTED: Bos taurus nanos homolog 1 (Drosophila) (NANOS1), 0.0 2931 100.00 0.319496360417077 NM_199461.2 NANOS1 Homo sapiens nanos homolog 1 (Drosophila) (NANOS1), mRNA. 0.0 1344 75.69 0.370647255557741 TCONS_00150990_1 sp|Q80WY3|NANO1_MOUSE NANO1_MOUSE Nanos homolog 1; 2e-54 187 89.66 0.239583333333333 1 noncoding 0 0 0 0 -0.150547683559771 0.354233598602619 0.000448645171496148 0.993489597240645 GATCGAACCTGTGTCTCCTGCATCGCAGGCGGATTCTTTACCGCTGAGCCACCAAGGAAGCCTTTCAGGAATTACTGCACATTGATTCTGAACCTCCACCAAAGTAGCCATGACACCATGGCTCAGCAATATGGACGTGCCCTCCTCAAGGCTACAGACACATCACCATCCCCCAACAGCCAGTGATCTGGGGAAACAGTTCTGTCATTCTCTTGGCCTGAACCAAATCCTCGCGGCACTGCCCAAGCCCAGCCTCATTCCTGAAGTAGGAATGTTGGCTGTGGGGCTAGATCTGTATGTTCTCTTTAAAAGTCTCCTTGTGAGGATTGTTTGGTTTGATCTCCTCTATGCAGACGAGACAGCCACCAGCAGCTGCAGACTCACAGCATCCCAAACAGCAGGGACTGAAGATGAGCAGAGAGAGCTGACAGTCCTAGTTAGAAAGAAGGCACCAGACGTGGGTTACCAGCCCTCTCCTAAAAATATCAAGGAACAGGGGCTGTTTCTGCTGCCTTACACCTTTCACGGCTCACCTCGCCAGGTTCAAAGGAGAGACTTCATAGAAGCCCCAGGCACCTCCAGGCCCCAGGGCTGTGTGGGGCTGGGGCAGTCAGAGCACTTCCTGCCCTTCACAGGAGCTTGGCAGGCGGGCCACGGGAACCCAGAGCCTGACAAACAGCATCTCTGTAGCCGCCTGGACCCCTGCCAAGCTGCCTCATTCCCTGGGGCTGACCTCATGTTTCTGAAGAGCCTCAAGACGCCCGAGTTCGGACTTCTGGAAGCGGAACCAAAGGCAGTCAGACTTCATCCAGCAGAGGTACTAAGCACATCTCAGAAGTCGGCTAAAGAGCCTCAAAGAGAGCTACAGGGCTCATCTACTGGCCACCACCTGGTCTCGGAACACCTGTTGGGAGGTGCTACAGTGCTGCTGTGGGAAAGTTATGTGTCCTTCCACTACTTACGAGGGGGCTCTGGTCAGCAGCCAATTAGCGCAGCGGCCCGAGGCGGCGCCTGTCCGCCCCCTCCCAGAATGAAAGCTGCCCCACAGCTGGCGAGGCGGGCGCAGCGCGTGGGTTGCAGGAACCTCGCGGGCCGGAGCAGCGCGCGCTCACTGCCCGCCCGCCCCCCGCGCGTCCGCCTCCGCTCCGCCTCCGTCCCGGGCGCGGGCGAGNNNNNNNNCGCCGCCGCCGCGGCCACCGCCGAAGCAGCACCGCGAGAGGAGCGGGCCCCGGCGTGGGCGGCCGAGCCCAAGCTGCACGCCGCCTCCGGGGCGGCCGCCGCCCGGCTGCTCAAGCCCGAGCTGCAGGTGTGCGTGTTTTGCCGGAACAACAAGGAGGCGGTGGCGCTCTACACCACCCACATCCTGAAGGGACCCGACGGGCGGGTGCTGTGCCCCGTGCTGCGCCGGTACACGTGTCCCCTGTGCGGTGCCAGCGGCGACAACGCGCACACCATCAAGTACTGCCCGCTTTCCAAAGTGCCGCCGCCGCCTGCAGCCCGCCCGCCGCCGCGCAGCGCCCGGGACGGCCTGCCCGGCAAGAAGCTGCGCTAAGGGCCCGGACCCCGGTCTGCTGCTGCCACCTGATGCCACTGGGGTAGCCGCCCGCCCACTCTCGTGTTTGGTCTGCGCACCATCTCTTCCTCGCTGCCGGGGAGTGTGGAGCTCGTCTTGGTTTTTCCAGAGGAAGCCGACGGTACCGAGTATTTTCCTAACGAAGAGCAGTTGAGACTAGACGTTAAAATTTTGATTAATGTTTCTAGTTTGTGCACATCCAGATGGTGAAGGCTGGGTATTCCACTAACTGAAATGTGGCAACTTAGAGGCGCTGTGGTTTATTTATACGTCGACCTATTTTAGATGCGCATCAGTATGAAATTGTCTCAGTCTAATCTTGGATGTTTAATTTTATGAATGGAGGCACTTTACTAGGTCTAGAATATTTTTTTAAAAGCCTCTCAACTGAACTTAAAACTGGCGATTTTATGGAGTGTCAGCAAAATGACTATTTTATTGTCTGAAACAATATTTCTGTTGTCCTTACCCAGTTGTAATTCCAGGTGAAGCCCTGCGTGGTAGCATCATTAAGTGAAGACTTGGTATGCTTTACAGTGTTAGTTTGGGTGGGTGTTCCCTCCTTGTGGCTTGTTTTTGTCCTAGCTGGAGATGTATAAAATGTACAATTTGTAGGTAGCAGGTAGAATACAGCTCATGTACCAGATCTTTTTATTACTGAACGAGCAACTACTACCGTTTTTCCCCTTTAAAAATAGTGCCAAGTTATAATCATATTGTGTATACACTTGAAAATGGTGCTGTTTAAAAAAATTGTGTATTTATACAGTAACAGTATATGAATTCATTAACCTTGCCTTTAACTCTACTTGGCTTTTTCTTTATGCCCCTTCCTATTCCAGTTCTTCAAAAATATGTGATACTTAAGATCAAACGGGTGCAATAACTCATTCACTCTGAATTGCTCCATTTCAGGGTCTCTAAATAGTGGAAATCTCATTCCAGCTGTTGCCTCTCAGACTAAATGTAAGATGGAATCCTTTGAGCTCTGGAAGGTTAATGAAACAACTGGTGTTCAGGAAGGTTCCACTCTGGACTGTGTCAGCTTTAAACCATCACAGAAGTCCTCAAACCAGTATAAGTACCAATTAAAGGAACTGACTGGGTGTAGGGGGGGTAACACAAGGAACACAGCCTCCATCTATTGTGTTCCCATTCTCATTAGAAGACAACCCTTCTGGAATCCCACCAGTTATTTTCATCGGTGAGATTAAATCTAATCTTGGGCAAAGGTGCTTGACTTCTACTTTTAACCTCCCATCTTCATTTTCAAGTCCACCACAGTGCATACCACACCGTATGTACCATCGGAACAGACACAGAAGGTAAAAATGGAAATGAATTAACATGAAGTCATCTAAAATGTACAAAATCACTATCTGAAAATAACAGCAACAGATTTAGTCTTTAGAGGTTCCAGGAGAGCTTAGCTAGATTATTAAAAATTAGGCTGCCTTCATATTAAACAACTCCCTCCCTCCACAGCAGATTTGCTTGATTTGAACACTTCTTTTAAAGTCTAAGAAGCTGCCATGATAGCTGAGATAGCTATGAGCTTTTTTGGTCAAAGGGTGAGAGAAGGGGGAGGGGGGTGCATACAGGCAAACCATTCATTTCTTGGTCAAGAAAAAAAACCCTGTTAGTACAGCTCCAAATGAGAAAACTTCAGACATGAATATACCTAAACTCAAAGGCATGCATTAACTTCTCTTCAGTTTTTCTAGAAAACATATCAATTTAAAATAGTTTTGCTTTCTGGGTTGTTTTTTGGTCACACGAATTCCTGTCACCTCTTGCCACTGCTTTAATTCTCCCTTTTCAAGAGTCACTAGTAACAGATGGGTGCATTCTCCAGACGGGAAGGACTAGGCAGGTCACTTACCTATCAGCAGCAACCCCTCACCAGCCATTTGCCTGTTTTCCAGCTAACTTTAGTTTCTAGTATTTTAAAGCATAACGGAGAATGTCAGTAGTTCTCTAGAACTCTCTTATGAAGTTTACTAAACAGGCTCTAACACATTTAAAAGCAACTCTCAATCTGAAACGTTTTAAGCACTTGAAAAGCTAAATTTAAGATAAAAGGAAATCCAATTTTTTGAAGTCTAGAAAGTATACAAAATAGTGACAAAAGTACTTATTTTCATAAGACTGCATATTTTTGGAAAAAGATGTACGGAATCCTCAAAAGAGCTTTACCAACTGTGCAGCCAGACTGCCTTACATTTTAAAATCATACCACAAATGAACATATACTTAAAAGAAAAATTTCAGTGTTAGTCCTAATTTTTTAATCTGTTCTTAGCTACAACATGAACATTGCTTCCATTAATTTCCAGTATATTTTAGTTAGACTTACAAAATCTTAAGTCGGTGTCTAGCCAAACCATGTCACACACTTGTTACAAAAGGCCCTCTTCTCACAAGACTTTCACTTGTTTGAAATGTAAATTAAGAAAAACGTTTTTTTAAAGTGAGTTCTATCATTATTAACATCAAAAAGCAAAGGCTGCACTTGGTAAAGTTTTTTATAAAAAAGCATCAATACTCCCTCTTCTGGCCTCATGGCTGCACCAAGAGTAATTCTCACCACTACTCAACACCAGAGATAATCTAAGTGCCTAGAGCCACTATAAATTTGCAATTAACATTCTGTGAAATCAATTATGCTTTTAATTTCAGGGGAAAACTCAAGATGTACATCACACACACACCACACAGAGAGGACAACTTTACAGGGAAATGCAACTTTACACACACACACACCCCCCCATACAGACAGGACAACTTTACAGGGAAACTAAGAGGTTCATCCGGTAACAGAGGAAGACACTTTAGTGGAAACATCCTAGCCACATTTGCTTTTTGTTATATTTAGGTTATTTTCTTTGATACGCAACAGTGAGAAAGTTAATATCACTGGTAAAACCTCAAGTGAAATAAACTCAAGGAATATGTAAGGTAAACATTATATATGAAACACTAACTCTAACCACAAATCAACACTAAAACAAATTCTGTAAGTGTTTTATTTATCATTGAAGAAAAAACACAGCAGCAAGTTCTGTGTTGGCTTCAATAAGACCAAAGAGTTAATCTTTAACATAGCTACTACACTCCAAAATTGAAGTCAACACAGTCATTACTACAAATTACTTATTGAAAGAATCTATTCTGAAGAGAAAGGAAATTAGGAAAAAGAATTTAAAGAATTCCTCCAAACCACACATTTATAAATATTGTCATATTTAAAATGCTTGAAAGGCATGAATTCTCCATAAATGGAAAAGCAGTTTGCTATTGGCAACAGAAACAACTCAGCCACAGTTTACCAAATGCTTTAAAATTTAAAAGCTATATCTGTTTTGGATTCACACTCCAGCAGTATTCTCGTCATTATAATAATGACCACAAGTTGGCTTATACTCACCTTCTTTCAAGTAAAATCTACCAAAAACTCCACTGTATCCAATGTGTCTAATGTTTACTGCACTTACAGTAAACCTAAAAACC EMBV3_19450 TGAAAGGGAGACTGGAGAAGGCTTTTGGGGATATTGTTACTAGATTTTATGCCATGGTGC Gene GeneID:541148|PTX3:NM_001076259:158_cdna Constitutive 0 NULL GeneID:541148 1 GENE PTX3 MGC142340 pentraxin-related gene, rapidly induced by IL-1 beta EMBV3_23154 GGCCCTGGCGAACTTGTTTGTTATAGTTGGTTTTGCGGCCTTCGCCTACACGGTCAAGTA Gene GeneID:506103|UBE2J2:NM_001038043:55_cdna Constitutive 0 NULL GeneID:506103 16 GENE UBE2J2 MGC133997 ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) EMBV3_18668 TCTTTTCTAGTTGTGGCAAGCAGGGGCTCCTATCTGGTAATGGTGCACGGGCTCCTCATT Gene BVT0101_024975 + 0 NULL GK000010.2:76960819-76976207 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02863 GCAGCCTGATTGACTTGGGTGTGGCTGTTGGGTTATCAGTTCAAGCTAAAGATGTGCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21693 AGAATCTTTTCCACTTCTGGAGCCAATTCCACTTCCGGAGCCAATTCCGCTTCCATCGCC Gene GeneID:100140143|KPRP:XM_002686060:295_cdna Constitutive 0 NULL GeneID:100140143 3 GENE KPRP NULL keratinocyte proline-rich protein EMBV3_37778 CGTCTGTTTTCTCTACCCAACGCCATTTAACATTTATCAGTCACCCACCAATGGATGAGC Gene BVT0102_273408 + 0 NULL GK000011.2:99198830-99223001 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026202 1 XLOC_014940 Coding TCONS_00026202 XLOC_014940 NonCoding Coding - 11:99215570-99219601 - TSS18837 2147 1 TCONS_00026202_5 78 0.138798323241733 2 0.467741935483871 0.00048591920633534 1.8183600816058e-05 0.000351931889548867 0 0 5.96224701764748e-06 8.01809481242536e-06 0.000949786492008128 1.05129443796089e-05 0.00267031154449675 0.00147044508308655 0.00079623850118269 0.000546700991308643 0.00209176764920618 0.000327722276704315 0.00100722397078969 0.000978390631358285 0.00486740238223713 0 0.000399568302195263 0 0.0016929180843972 0.000184605945590136 0.00118856595247775 0 1.52385964523518e-127 2.92515909260761e-203 0.00111100235530838 0.00121946189063809 0.00245119136195721 XM_005194989.1 ZNF84 PREDICTED: Bos taurus zinc finger protein 84 (ZNF84), transcript 1e-53 215 78.99 0.114112715416861 0 noncoding 0 0 0 0 -0.170820738921146 0.406303311786954 0.0223489425773387 0.636899911830459 CTCTTCCTTTGTAATTTTTGACTGGATTCCTTCAACATTCATTTATTTCTCCAAGCTGAGATCTAACTACCAGGGAAGTAGTTAGCCAGACATGGGGGTGGGAGTGGAGAGACTGAAGAATGTTACAGGCTGAGGTAAGGCAAGAGCACGCTGAAATCCTCCAGAGGCCAGAGGAAAAAAAGAGGACAGGTCCAAGTTCTCATTGAGGGCAGTGCTGCCTCCAGAGAAGATCTGAGAAAGGACTGGAGGATCGGTCATTGGGGTTTCAAGTCGAGACCAAGAGGGTCCTAGAAAGAAGAGAACTGCTCCCTGCTGGAGGAAAACACCTTCCCCACCCACCCAAGGCCTAGAAAGCCCTGGGAGAGAACAGAGCAAGGAAAAGAAGTTGATTTTGATTGGAGGGTGGGTAGTAGAGGCGGGGGAGTGGGGTGTGTCCCACTGTCTTGTAAATATCCCCTCCAGGCACATTCCCAGCATATTTAAACCTCTGTCACCTGGGACAGCTTCAGTTCTCTGAGCTCGCAGTTCCTCCCTCTTCCCCTGGGAGGATTCTTGGCTTTTTTTCCCCCAGCATGGCCCCCAAACACCAGTCTTCTCTTCCACCCCAAGCGAAGAAACTGAAGAAGGCCAGGCCGACTCCTGCCTCCAGGCCAAACGAGGCATCTGCTTCTTCAAACTTGCCGAAGGAAGTGTGTGCTCTTTGAATTCATCTTGAGGAGTGCTGTGGGAAAGGTCAGGAAGAACGGGATGGTCCTGAGGGCTGGGATGGAAACCTTGAAAGCCCACTGCCTAATCAGAAAGCTTTGGAAGGCTCCCTGGAGCCACTGCCCACACAGGAGAAACACCAGTAGATCTGGTATTCAGGAGATGCTCTGGGTCACCGGTACCAAGCAGTGAGAGCAGGCTTAGTGTATGGAAACAGTACCCTTTAGCACGGTGTTTTTCAGATCTTTTCATCCCACTTGTGGGTTATGAAATCATTTTAGTTGATAGTGACCTGCATTTAAAGAAAATAAAGTAGATTAAAAGAGTCATCACACTCAGTGAGGGTAAGCATTGTTTTGTCTGTAGGTGTGTTTGTGTGCGTGTGTGTGCGTGTGCGTGTGCACACATGCATGCTCAGTTGTGTCCAAATCTTCGCAGCCCCTTAGACTGTAGCCCGCCAGGCTCCTCAGTTCATTGCATTTCCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTTCAGGGAATCTTCCTGACCCAGGGATTGAACCCACGTCTCCTGCTTGACAGGTGGATTCTTTACCAATGAGCCACCTGGGAAAGCCCACCTCTTACTGTAGTTTGTGTCAAAAACTCTGTCCTTAGGGCAGGGGTTTTGTTCTTCATTAGCCTCCGTTCTGCTACATGTATCAAAAAAGCTGAGTTCACCCGTGAAATGAGGCTATTAATACCTATCTTGTATTTTGTGAAGATTAAAAAAGAAGGAAATGCATATACTTATTACAGTCTGTGGCCCATGCTACATGCTTGAGCAGTGCACTGGAGCCTGGTATTTCTTTCCAGCTCTATTCAGTGGCATCAAAGTGGTAGCAGGAAATTTGCCTTGGTGAGAGTATTTATACACTGCTGACGTCAGCCAATGCTACAATCAGAGTTTTTTGGTGTGTTTTTTTTCTCTTCTGGGAGCTGTCTGTCAAAGTTTCCCAGCTTCTTATTGTTGCTAATAATTCTTCCCTTAAAAAGCGTCCAACTGGGACAGGTTTGGATTGAGCTAATTGAGAATAATAGGGTTTGGAGGAGAAAGATTTCTCCTAATTTCTGGGTTTTCGGGAAAGTCCCAAGAAGACGTCTGTTTTCTCTACCCAACGCCATTTAACATTTATCAGTCACCCACCAATGGATGAGCTTGAACATTAAAGACACTGCTTGAGCTTTAAGAGCTGATAGTAAAATGTGACTCCTGGGAGGCAAATAATCCAACCCCTGGTTTTGGTTACAAATACCCAAAGAGATTTCAGGCCTTCTGTGGTCCATGTCTTGGGGCCCTGCTGGACAGAGTAGAGCCTTGAGTAGTTCATGTATATTACTTGGAAAGCACATAGTTGAAATAGAAGTGCCCTGGCCTTCGTGTTTCAGGGCTTGATCTCTAAAGCAGGCCTT TCONS_00026203 s 5' 0 TCONS_00026203 s 5' 0 EMBV3_12802 TCACGGGTACTCTGTTGTTCCATTTGAGTCATGGAGCTGTTTCTCTCAATAATCTGCATG Gene BVT0102_160908 + 0 NULL GK000007.2:36652192-38732389 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216519 TCONS_00216520 TCONS_00216523 TCONS_00216524 TCONS_00216521 TCONS_00216522 1 XLOC_131249 Coding TCONS_00216522 XLOC_131249 NonCoding Coding - 7:38564392-38578221 - TSS161462 2831 4 TCONS_00216522_1 50 0.199929353585306 3 0.795487416835406 0.000668124750592755 0.00153169100449347 0.000913137656258987 0.000440010024294188 0.000350633002066293 0.000392374378134366 0.000350447821849776 0.000662740526357 0.00124456558110911 6.67852223995071e-09 1.44117527789083e-08 1.2079014289224e-10 2.73520730026396e-06 0.000201391575397445 4.03898940722159e-05 0 0 0 0.00214145820552371 0.00222824991827536 0.00040600839710777 0 0 0 0.000498650714059741 0.001415936958892 0.00126739514115369 6.71936455230835e-12 4.09280453425823e-08 0 NM_001102247.1 ZYG11B Bos taurus zyg-11 homolog B (C. elegans) (ZYG11B), mRNA. 2e-59 235 84.51 0.0748851995761215 0 noncoding 0 0 1 0 -0.00625005661311989 0.964352667616371 0.00500605723463877 0.914084823430851 GATGGGGATGAGGGGGAAGGAGGGATCCAGAGCAGCTGAGTAGCTTGATTGGAGCCTTTGTGATAGGAAGGAGCATGCACACTGAGAAAGGTTGTGAGAAGATTCAATCAATGAACATTTGAAGAGCATCTAAAGTACATCCTGGCAGACGGTTAACATTAAATGTAAAGTGGGCTTCCCTGGTGGCTCAAACAGTAAAGAATCTGCCTGCAATGTGGGAGACCGACGTTCCATCCCTGGGTGAGGAAGATCTCCTGGAGAAAGAAATGGCTACCCACTCCAGTATTTTTGCCTGGAGAAATCCATGGGCAGAGGAGCCTGACGGGTTACAGTCTATGGGGTCGCAAAGAGTCGGACATGACTGAGTGACTAACACACACACATTGTGTAAAGAACATGGACAGTTTTGCTCGCTGGTGGCTCAGTCTGTCGTAGCTATGGAGCACTGGCCAGTCAGTTAAGTTCTTTGGATGTCAGTTTCTTTCATCATTCCTAAAATGGAGACAAGTCTTTTCACCATAGAATTGTTATGAAAGGTAAATGACAGTCTACATAAATTACAGTTGTTCAACTCATAATGGCTCTCAACAAATGGTTATTCTTTACTTCTTCTTTCTTTTTTTCTTACCGTGGCAAGATGAGTTCCATCCATTGATGTAAATGTTAGTCCTCTACTTACGTAGGAACTTCAAACACATCAGTTACTTGGCTTATTTTTGCTAAGCTCCAAATAGATGTCAGTTGACTTTTGCATTATTACTCACAACCCTTTGTCAAAGTATATTGCCTTATATTATTTGAAATGAATTATTTCATTATTCCCCAACCTCAGAAAGAGAAGAAGGATTTTTCCAAAAAGGCAGTTGACTAAATGTGTATCTTGACTCAAAGAGTTGCCTGCAAGTTGTCTCTGTATGTTATGGAATGATGACCGTAGCGTGAAGGGAAGAGTAAGTTCTTTAGGAGAGCAATAGAATGGCATCTTCTTAGATTCATTCATTTTTATAATCAGCTAGAGGGATCCTGACTTGATTTCAGTGTGATTTAGTATATAATTGGATTAAACTCTGCACTCCATTAAAAACCAATCAGGTCACTTGCCCTGCAGGAATTTTGCTTTTATGAAGAAGTCATCATTTCAGAGCCCCTCACCTTTTTTTTCTTGTGGATGAGTTATTTAGCCTACAGCTTCCCTGGGTTTTCCTTATTGGTGCCTTCATATATAAATTTGAATATGAACATGAGTAAATTATAGATTCCCTGTTGGCTATGGCTTTGTTCTTTGGAGTGGAGATGAATTTCTCAAAGTTCTTTTCATCATCTATCCTGTGGATTCGATCACTGGAGAAGTTGAGAATTATTATGCAGAGTATGAGTCTGGGTTTAAGAAGAGATTGGAATATGTTTTAACAGGAGATGTAAAGTAATCATCATGCAGATTATTGAGAGAAACAGCTCCATGACTCAAATGGAACAACAGAGTACCCGTGATTAATTCTAAGAGTATAAAGCCCATACCCTATTTCTTCTTTACTTACTGTAAGCCTGTACACGTTTGGGCTTGATAAGTGTGCTTTCTAATAACATTGCTAACATTGCTAATAACTTTAACACTAGGCATCCATTTTAGGAAATGAACTCTCATAGTTTGGCACCAGTAATAATAACAACAATAGAAATAAGACTGAAAAAACAAGAATGAGGAGGATTACTACCTCCTGAGCACTTGCTTAATGCCTGGCATTGTGCCCAGCATGTGACATGCTCATTGGCGCTTAACACTCAGAGCCACCTTTTAAAACGGGTTCTATTGTTATTTCCTCTTTACCACTGCTGAAATCAGATGAAGTTACTTGCCCAGGAACACAAAACTAGTATACGGTATAGTGAGGTTCAAACCCAGGCAGTCTATTCTGCTGGGTAATTCCACCAATACTTGACATCTAATTCCACAGAAGAGTATTAGCTGAGCAAAATCAGACTGAACTTATCAGTGATGTGGGAACTATTTAGCAAATAGGAAATTTAGAGTGGTGGGAAATCTCTCCATGAGTGACAGATGTTGTTGAACACAAAACTTCTTAACAGACTGCTTGCTTCATTGGTCAAATTCAGTTTTAGAAAGGTGCTGATTCACTGACACAGTTGCTTTGCATTATGGCCAGATGCTGATTCAATACTTGAGAGTGTTGCCTTTCGATTCAGTCTAATGGGAAATTAACAAGTGACTTCTGGGGAAAGCAAAAAAAAAAAAAGAAAGAAATGGCTAGGGTGGGTTACAGATAATAATCTTGTTCATCAAGGAACTGCCAGTCCCCTACCCCCACCCCGTCCTCCCCTAAAGGCATCTCAGTGATGGCCAGTTGCTTTGTCTTGGTTGACACAAAACTCTGTTGTTTGTCCAGCTGTTGCCAAGTGACGCTTTGATATTTGCATAGCCAGGAAGTGCTGGAAACTTGGGCTCCAACATTGCCCTGTCTTATTTTTATAGTAATTAGGAGTTAAAAATTATTTTTAGGTTTCTGACAAGAATTATTTATTGCAGCTTCTATTTTAACTTTGTAAATAAAGTTCTATTTCCTGGTTGCTTGGAATGAGAAGTTTATGACTTATAGCATCTCCTGGAAGATGAAGTGGATTTCTGTGTGGAGTTTATGAAACAACTTCCAGGACTGAGTAGCACGGAATGCTCCATGGAAAAGCCTTGGGACATACTTGGGAAGAATTACTCACTATTACCTGTAAAAGTATAGCACTTCTCTTGTTTTCATTTTTTCCAATGTGTGAAGACTGGTAATTTCTATGGAATCAGAACAATCTCTCCTTTGCTT TCONS_00212844 r 5' 99991 TCONS_00212844 r 5' 88842 EMBV3_14514 CTGCAGCCTTGTTCCCAGTCCAACCTACCTCTGTATAGTGACTCTCGTGCTGGTCTATTA Gene GeneID:518976|SLC31A1:NM_001100381:32_cdna Constitutive 2 NULL GeneID:518976 8 GENE SLC31A1 NULL solute carrier family 31 (copper transporters), member 1 EMBV3_14214 ATCTCAAAAAAGGGACTGGCTCCTTCCTGTCCCCTCCTCCAAACACCTCCAGGACCTACA Gene BVT0102_125818 + 1 EMBV3_34449 GK000028.2:44251163-44283035 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159799 TCONS_00159800 1 XLOC_097510 NonCoding TCONS_00159800 XLOC_097510 NonCoding NonCoding - 28:44254622-44257730 - TSS119679 3108 5 TCONS_00159800_5 68 0.074967824967825 1 0 4.72725098544245e-05 5.2956264334653e-05 0.000273522173228283 3.58294102227021e-40 0 0 2.25162541447026e-05 1.38893033113862e-69 0.000144950235889131 3.1888575564106e-06 1.41590964922748e-89 0 7.54891890119076e-05 3.02702503116484e-06 3.81099860760364e-313 0 0 0 0.000198643668939322 0.000351205265209381 8.40601968223409e-191 0 0 0 0.000460522096905739 8.59603110982101e-05 0.00018006389421399 0 0 0 NM_174038.3 DMP1 Bos taurus dentin matrix acidic phosphoprotein 1 (DMP1), mRNA. 2e-53 215 77.09 0.0778635778635779 0 noncoding 1 0 1 1 -0.53047810177807 0.0639213989740359 -0.0354706467451088 0.546099099429285 ACCGCGCCAGCAGGATGGTAGACATCCGGCGGGTGAACCACTGTCTTCCCAGATGAGCTCATGGACGCCGCTTGCGTGCTGGCCTCGCGTGGGCCAGTTGATATTAATCGGTGGGACCGGGAGCTCGGGGTGTCCCTCGCAGGATGGGGTGGGGATGGTGGGGAGGGAGGTAAGAAAGCCTTTGGGCTGGAGTCCTGAACTACCAGTAAGAGTTTTACAGAAGGTGGAGTTTAACAGATGACTTGGCGAGCAAGCGGAAGTAGCAAGAGGGAAAGAGCTAGGGCTGAGACCTTGCCTGACTGCTTAGGGGATACAGAGTCGCTTCCTGGATCGCGGGTTTTGGAGACTGTAGAGAAGGGAGGGGAGGCTGCAGTGGCACGTTAGGGCCAGACATCCCTTCCCCCACGTGTGTGGAGGGACACGATCCTAGGACAAAGCTGCACAAGAACCCAGCAGCGAGGACCTGAGACAGCCCCGCAAGATCGCTGGGGCACTGTTTGGGGCGGGCCTCGGGCTACCCCTGGGGGTGACGCCCCGCAGTGCGCTCCAGCGACTACCCGACTTCTGGGCTGAAAAATACCCCTTCCTCATTGCCTCTTCCGGCCCTTACTCTGCACCCACCAAGCGCGCCCAGCCGGTAAACCCCTCTAAGGAGGCTCTGAACCCGGACCTGGCATTGCAACAGACTCTCGGCTAATCAGTCTCACGTCTCTGCTAGAGCCGGCCCCACTCCACGCTCAGGATGCGTTGTAGGTCCTGGAGGTGTTTGGAGGAGGGGACAGGAAGGAGCCAGTCCCTTTTTTGAGATGGGTACCTGGGAGACAGGCCTGCGCCCACTCCTGGTGAGCTTTGTCAAGGAGTATCCCGGGAAATCCAGTCCAGGCCTCTGATGTGGGGAGACTCGGCCAACTCTGTGAGAAAGCCGTGACTCTCTCAAGAGGGGCCTGTCTCCTGTAAAATGGAGGCAATCAGCTTGAAATCCCACACAACAGGTGAGCACTTAGATATGAGGGGCTCTCACCCAAGCAGAGCCAAACAGCCCATCAAGCTTGCCCTCTTAGGGAATCAGGATGAGTACAGATATATGAGGGAGGGCTTCCTGGAAAAGAAGAAAAGACTGGTGGACTGAAGGAGCAAAGGCTTGGGGGCAAGCATGGGTCGGGCAGGTCTGCGGAGATAATTGGAGGGTGGTTCTCCTTGGCCGGGCGTCTAGTGCTCCAGAGCAGAGGTCAGAATGGAGATATCAGACAGGCCCAAGGAAAGCGCCTCTAATGTTCTAGCTGACATTTGCATCCTCAAAGCTTTGTTTAAGTAGGGGACATGGTCATATTTTGTTTTAATAAAAATATGTTGTTCTGGAAGGTGGTGGAGGAAACAAGGCTGAGGCAAGGAGGAAGCAGCCCAATCAAGGAAAGAATAGTAAAAACCTGTGTGAACTGCAGTTGTACCTGTGGGGTCTGGGGAAGAGCCACCTGTGACGGAGTATTATGCAAGAGTGATCAGTTGCGCCAAGGCATTGAGTCCTGAGCAAGAGGAGTCAGGTGTGCATCCCAGGATCCTGGAGGGTGCCCAAGACCCCTCATGTCTCTCTGTGAGATGGTTACTGGCACGAGAAGAAGCCCTCGTGCAGGGCTGGGCCACACTATTCTTTGAGGCCAAGAGAATATTTCCTCATTACCCTTGGAAAACTAACGAGCTTAATGGAGGGAGAGACCCAAGCAGTCCCTGCTTTCATGGCGGTTTCAGAATACATAGCTGGCTGTCAGCAGGTTCACAGAGTCCTCAACCCTGTATATGCAGGAAAGACAAAACAGAAACCAAAGGAAGGGAAGAAAAAGAAATAACACTGAAGTGTTAGGGAGTCAGAAGACAGGCATTCTTAACTGAGTTGATTTTTAGAGTCAAGATTTTTTTTTTCAATTGCAATGTCGATAAATACTCTTTACAGAAATGTTTGAAAGCACAGAAAATTATAAGAAAATATTCATATCCTATCCTTTTACTCCAACTTACCCACTCAGTTGAGTTTATCATGTAGAGTTTTTCTATCTTCCTTGTGTAGTTTTCAAACTTCTAATACAGTCGTGGCTAGATTGTCTTCACAACTTGCAGAGTCACTTCTTAAGAATATAGGCATTTCCCATGATGTAACAGACTCTCCCAGTTCACCTTAAATGTCGCCGTGTTGAACAGGTCACCCCAATCTTGGCCTGGCAGGTTCAGTTTAATCCATGACCCCTAAACTCCAGTGTATCTACAAATTATGAATGCAGGGCCACTTGGTTTACTGGCCTTTTGCATTATAACAAGTTAAGAAACCTAGCTTCCACAACTCTCATTAATCTTTTTTTCCTGGAAAAAGATTTGGGCAACCCTAAGTGACGTGACTTAGAAACTGCAGCAGTATAATTAACTTCCAGTGGAAGCAAGGATGAAGTGTGGGCTGAGGTTAGTTAATAAAATTGGGGTAGTGTCCTTGTATGATATGAACCGTGTGGCTGTAGAGATGATGGCTCTAGGGAATAATCAGTGCCATTATTGATTTAATAAGAAACAACTGAGCTGTTGATACATGGCTGCTGTTGTTCAGTCTTTAAGCCGTGTCTCTGTGACCCGGTGAACTGCAGCATGCCAGGCTTTCCTGGAGTTTGCTCAAACTCATGTCCATTGAGTGATGCTATCTAACCAACTCATCCTCTGCGGTGCTCCTCTTGCTTTGCCTTCAATCTTTCCCAACATCAGGGTCTTTTCAAATGAGCTGGCTCTTTGCATCAGGTGGCCAAAGTATTGGAGCTTCAGCATCAGTTCTTCCAGTGAATAGACACATAGTTGGATACAGACTTTGTCTTATTATTTAAACTCCACTGAAAAAGAAAAAGTTTGCAGCATATTCTCACTGGTTGACTAGTAGAGGGAAGGAGGATTTGTCATTATTCAGAAAGAGGGGCTCTGCTGACCTTTAAGGAAACCTTAGGAACAGGCCTTATGTTTTAAGCTCAGAGACCCGGGAGCGCAAGTGTTCAACATCTTCTAGGAACTGGGCTCCGTTGTTGTCAATGTCCGTGTTCTTCAGGGTGGGGTCTACAAACCAGAAGCATTGGCTTCACC TCONS_00160833 r 5' 0 TCONS_00160833 r 5' 0 EMBV3_14612 AAGCAGCAAGGAACAAAGACTCTCTCCTTCAAGGCTGGGGGGTCCCAGGGAGACCCACAA Gene GeneID:786925|LOC786925:XR_083691:79_cdna Constitutive 0 NULL GeneID:786925 5 PSEUDO LOC786925 NULL similar to IQ motif and Sec7 domain 3 EMBV3_42016 CAGACCTCATAGATGTTGATCTTGTAAGAGCCCACATAGCATACCTCTGACGGAAGTGAC Variant GeneID:520774|PHTF2:XM_002686770:79_cdna 185^377 1 EMBV3_07941 GeneID:520774 4 GENE PHTF2 NULL putative homeodomain transcription factor 2 EMBV3_25395 TACCAGTTATGTGCTATGCCACCTATTAATTGATTTTGGTTGTAGAAGGCTATCCCCACC Gene BVV0101_043620 - 0 NULL GK000004.2:59982006-60018193 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181696 TCONS_00181687 TCONS_00181685 TCONS_00181695 TCONS_00181689 TCONS_00181694 TCONS_00181690 TCONS_00181686 TCONS_00181693 TCONS_00181692 TCONS_00181688 TCONS_00181691 1 XLOC_110670 Coding TCONS_00181687 XLOC_110670 Coding Coding THAP5 4:59975739-59986534 j TSS135923 6338 1 TCONS_00181687_1 395 0.334648153991796 4 0.41319251435983 0.0028151624952362 0.00270873581712526 0.00158849862763374 0.000897525994872087 0.00148446207125325 0.000606221409485827 0.000856979141254051 2.08370934534739e-05 0.00149424345797811 0.000299991228908331 4.814745537771e-05 0.000260387490248433 9.7120813289102e-05 0.000255675330737651 2.32816386889828e-05 0.00187139417950076 3.23228731499108e-33 3.54087100172012e-06 3.94544918630147e-17 0.000592472370021232 6.0221321834259e-05 0.000575651971790702 8.93524068335989e-15 0.00177976097125387 0.000407673762391307 0.000112181950803651 0.000735639079791382 2.27168443044306e-07 0.000419615150636759 1.81903540263715e-07 XM_005205460.1 THAP5 PREDICTED: Bos taurus THAP domain containing 5 (THAP5), transcript 0.0 4266 99.96 0.373461659829599 NM_001130475.1 THAP5 Homo sapiens THAP domain containing 5 (THAP5), transcript variant 0.0 1543 87.08 0.199431997475544 TCONS_00181687_1 sp|Q1RMM0|THAP5_BOVIN THAP5_BOVIN THAP domain-containing protein 5; 0.0 741 99.75 0.99746835443038 1 coding 0 0 0 0 -0.0245511153906726 0.860420040898137 0.00448699703176789 0.93904043426996 CGTCACTTCCGGCTCCAACCCCCTAAAGGGCCGAACCGAAGCCGGCGGAAACGGAAGTGAGTTCAGGGTGGCCGAGTCTTTCCACTCCACCCCGCCTGGCGCAGGCGCGATACCTCGGGCAGCAAGGATCTCCAGCCCCGCCTCGGTGAGGAAGTCCCGCCTGTGCCCCTTGGCGGCTCGGGTCTTGTGTGGCAGCGCTGCAGGGATGCCCCGCTATTGCGCAGCGATTTGCTGTAAGAACCGCCGGGGACGAAATAATAAAGAGCGGAAGCTTAGTTTTTACCCGTTTCCTCTACATGACAAAGAAAGACTTGAAAAATGGTTAAAGAATATGAAACGAGATTCATGGGTTCCAAGTAAATACCAGTTCCTGTGTAGTGACCATTTTACTCCTGACTCTCTTGACATCAGATGGGGTATTCGCTATTTGAAACAAACTGCAATTCCAACAATATTTGCTTTGCCTGAAGACAATCAGGAGAAAGATCCTTCCAAAAAAAAATCTCAGAAGAAAAAATTGAAAAGTGAGAAAGAAGTATGCCTAAAAGCCAAGTCAGAAGAATCTTTTGCATCAAATGAGCCAAAGAAGCATCCAGTTAATACAGATCTCCTCCCTGAACATGCAGAATTACTTGAATCATCTGCCTTGGTAAAACCACCAGATCCAAAAGCAGAAAGTGTGCAAAATAACATATTAACTCTTAGTCTAGTTAAACAAGGTACCAGAAAACCAGAATCTATATTGGAAACATCAGTTAACCAAGACATGGGTATAGGTGGTTTTCACACATCATTTGAGAATCTAAGTTCTACAACTATTACTTTGACAACTGCAAGTTCAGAGGGCATTCAGCAGCCTTTAGAAACCCAAGAAGTGATTGAAATAACTACTAATCATCTTGCTAACCCACACTTTACAAATAATTCTGTGGAAATTAAGTCAGCACAGGAAAATCCATTCATACTCAGCACAGTTACTCAAACAGTTGAAGAATTAAACACAGATAAAGAATCCGTTATTGCCATTTTTGTACCTACAGAAAATTCCAAACCTGCGATTAATTCTTTTATACCTGCCCCCAAAGAAACAGTGGAAATGGAAGAAGATATAGACATCGAAGACTCATATAAGGATGTAGACTATGAGACAGAAGTTTTACAGATTGAGCATTCTTACTGCAGACAAGATGTAAATAAGGAACATCTTTGGCAGAAAGTGTCTAAACTACATTCAAAGATAACTCTCCTTGAGTTACAGGAACAACAAACTCTAGGGAGATTGAAGTCTTTGGAAGCTCTTATAAGGCAGCTAAAACAGGAAAACTGGCTATCTGAAGAAAATGTCAAGATTATAGAAAACCATTTCACGACATATGAAGTTACTATGATATAGATTAAGAGGTTTCCAACTTCTCTGATGCCTCGAGCAGTAAAGAATCCACCTGCAATGCAGGAGAGCCAGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAATAGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGAACAGAGGAGCCTGGAGGTCTGCAGTCCGTGGGGTCACAAAGAGTCGGACATGACTAAGCGACTAATATTTTTTGTATTTTACCAGAAAATACTCTTGTTAGGTTTTATTCCAGTTGAACTAAAATAAGGAATCAACCATTAGCCTAGTTCTTAGGAGAGGTACTTTAAACTTGAAAGAATATATATCTTGTATGTAGCTGACCATCATAATACACAGTTATTTGAATTGACACCCTGCAATTAAAGTTATTTTTATAAACCAAAAATTAAAATGAGGTTAATTTTTTAAATATTTTTTAGGAATTAACAGTTTATATCTATTTAAAATGTATAACCTTTAAACGTGTGCATGTCTCATTTTAAAATTCCAGAATAGAATAATACTTATTATTATACCTTCCCACTTACATGTATTTTATTAAAAGAAATTATAGATAGGTGGTGATGACCATGGCTTTGCAAGTGGTGCAATGATAAAGAATCTGCCTGCCAATGCAGGAGATGCAGGTTGATCCCTGGGTTGGAAAGGTCCCCTGAAGTAAGAAATGGCAACCCACTCCAGTATTCTTGCCTAAAAAATTCCTTGGGCAGAGTAGCCTGAGAGGCTACAGCCCATGGAGTTGCAAACAGCTGGACGCCACTGAGCACGTGCACATGGTAATGACCTTAGGGAGGTAACTAAGAAAGAGACGAAGGATGGTTTTTTTGATTTCTGTAAGGTAATAAACGTGTTTTGGTGCTGAAAAATAGGTCGTGCTCAATAAATAGTTGACTACACAGCAGATAGTATTTTAATTGTTTTTCTAAGTGGATGGTGATTATTTGCATATGAATGTGTGTTAGCTAATTATAAAAAAGTTAATCAGAGGTATCCTTATAACCATGGGGGGGAAATCCTTAACATTTTTGTATAAATTATGTACGTATAATTAATAAAGTTGATATATTAAGTTCCATTTTGATAATATTTAAAATACATACTCTAAATGTAAATAGCCCTTTTAAGTCATTATAAAGTGTACATTATAGTTATTTTCTATTTATAGTTTACTCAGGAATAATTTCGGAGAAGGCAATGGTACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTGGGCTCCAGTGCATGGGGTCGCTATAAGTCTGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGAAGAAGGAAATGGCAACTCATTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACTGGGGAGCCTGGTGGCTACCATCTATGGGGTCGCACAGATTCAGACACACCTGAAGCAACTTAGCAGCGGCAGCAGGAATAATTTAAACTAGTTGTATTTCTTTAAACTACTATATTACAAGTATCTAAGATACTCTTGACTTGTATATTCAGTTTAGAGTGTTCCAACCTAACTCAGTTAACTGTTAAATTTTATTTGGGGGTTTTGACCAACTTTATTTCTTACTTGGATTATTATAGGAACTTCTTAACTAATAGTACCTGTATTTTGGATCTCCTGCTTTTGGATCTTCCCAGAGTCCACTGTTAAGTTTTTTACCTAAACTATACATCTAGCTGTGTCACTTGTGTACCACTTAACTTTCCTAGCTCAGAAATCGGTAATCACCCTTTAATACCTACAGAATACAGCACAACTTGTTTCCATCATGTATATTATCCTCTGTGATTCTGTTCATCCTGTGTTCTAGCCATACTCGAATTCTTAGCATTTCTCAAACATGCTGACTTTGTTTATTTTATTCTTTAAATTCAACCAGTTAAAATTACATTTCAGCTTTGTGGGAATATCATCCCTTTTACCAATCAAAATGGATTTTTCTTTGTTTCTACAGGGTTTGTATTATAACACTGTAGCAGTACTTACACGTTTTTTAAATTAATTTTTATTGGAGTATGGTTGCTTTTGTTTATCCTTTTTTTATATCATGATGTTATGGCTTTCTGTTCGACTTGACTATGCTTTTTTTTTTTTTTTTTAATTCTAGTGTTAATTGAATAAATGAAAGTACAGCTTTTAAGGATCAAAGAGACGTGTTAACATGGGATGGGGGAAGGTAATGTGATGAAGTAAGAAGTAAAAGCAGACAAGAGAGAGCATCCCTTGCTTCATAGCCAGGGCTCATCTTCACTTTTGTTTCATTGACAATGTAATATTCACTCAATAAAGGTTTGGATGAATATTCTGAATTTGCCTACTTAGAATTTCTTATTATTTAAAATAAAGAACCTTTTAAACAATTATGTCCTTCATACCTTGAGAATGTTTAGGGAAGGATATTGATCTTCTTATAGTCTTTGAAACATTCTGTGTTTCCAGTGTACAGTACAATTTACCAGTTATGTGCTATGCCACCTATTAATTGATTTTGGTTGTAGAAGGCTATCCCCACCACAAACTATTTCCTCCTTTCTATCCCAGATAATTAGAAAGGATATTAAGTCTAAGGAAGCTGTGTATCTTTATGCCTATACTTCAGGGAGATTGGTAAGTCATTTAAAAAGATTTCATCATAAATAATACATGGCATTGATCTAAACATCAAGCAGGAAATTTTTCTGCATACTTTTGATCTTGAAAAAAATGACTCATGCATCGAGAGTTGAAATATTGATGTGCAGATGAATTTTTCTATTACTAGCTAAATTGAACCGTTCTGTCAACTAATTTGGTGTTCAAGTACATGCTTTCTTCTTTTTTAGATTACACTGTTTTTCTGTGGATGAGGTGAGTGGGTTAAAACACAGCTGTCAGGGAAAAAGCTATAGAGAAAGGTGAGGGTAGAGATATTGACCAAGATGCATCTGTGTTAGAGAAACTTTTCTTCAAGGAATGGCCTGTTTGAATTATCATTTTTAACCTATTCACCACCCTCTGATTTTTTGGTTGCTTGACCACCTCATCTCCAGTGAACTTTTCCTCCATACCTTCTCAGCCACCTCATTTCCATGGTAAGTGGTAGACCTTTGTCATTTCCAGTACTTGAATCTGCTTTGAAAATTGTCAACTTAAAGCTCTTCATTCTGACCACCAGCTTCTGTTCTTTAGCATAGTTATTGGAACAGCTTACATTCCAACCAACCCTTTTCCATGGCCCATCATCCCTGCAGTGATTACGTTTTCCAAATATGGCTGCAAAATATCTCTCATCCTATATTCTCCACAGTATAACCTTGCCACTCCATTATCAAGAAGTGGAGTTTATTTCTCTACCTTTTTCTGGAAAAGAGTGTGGCTGCTTTGATTGATAAGAGTACAGTAAAAGTGACTGCTAATTCCAACAGCCTGTAATGGGCCTGACAGCTTTCATTTCCTCTCTGGAGCTTTTGCTTCCTTAGAATACCAGGTGCCATGTAAGGTGTGTGATTACCCTGAGATCATGCTGGAAAAACCAAAGTCACATGGAAAAACTGGAAAGTGAGATACCAGACATGGAGTGAAGAAGCCACCTTGAAATTGATTCTCAAGCCCGTCACTCCAGGCTTCAAATGCAGCAGAGACAATCTCTTAGCTGAGCTCTTGCTAAATTCCTTTTGGGGTGGATTGTTAGGAAGTGTTTTAGGATGTGTTTTCCAGAGAAACAATTTCCCAGATCTGCAGCTGGTGAGCTGCAGACTCAGAAGAGCCCAAGGTGTAGTTCTAGTCCAAATCTGAAGGCCTAAGAACTGGGAGACCTGATTGTATAAGTTCTAGTCTGGGTTTGAGTTTGAAGGAAGGAGAGTCAATGTCCCAATTCAAAGGCAGGCCAAGAGTGAATTCTGCCTTACTCTTCTGTGCTGTGCTTAGTTGCTCAGTCATGTCTGACTTTGCAACCGTATGGACTGTAGCCCACCAGGCTCCTCTGTCCCCTGGATTTTCCAGGGAAGAATACCGGAGTGGGTTGCCATGCCCTTCTCTAGAGGATCTTCCAACCAAAGGATCGAACCCAGGTCTCCTGCATTGCAGGCAGATTCTTTACCATCTGAACCACCAGAGAATGAGGCCTACCTATATTAGGGAGGGCAATCTACTTTACTCTGTCCACTCATTGAAATGTTAATCTCATTCAGAAACACACACAGATAGACCCAGAATAACATCTAACCAAATATCTGGGCACTCTGGCCCAGCCAAGTTGACACATTAACTGTTACAGGTAGCAATAGATAACCAACGCTATCCCCCTTCTGTATTTACCTCCATCCTTACTCTGATGCTGTGAACCATCATAACTGCTCTCCAGTAAAACCTTAAACAATATTGATCCCCTGTCTACTGTTCTCACTTGCCTAAACTCCATCTCATTGAACTCAAATACCTGTCTGCCTTTTTCTACATCAGAGTACGTTAGACTTAGCTGGAGAAGATCATACCAATGGACAGGCTTAATTCCACATTCATATCCAGAAACCCCAATTGGACCCAGCAGCATTATTGTATTTCTCAAGTGAGTTCATATCTCCAGTCTGATTCTCCCTCACACTGCTCCCTTCCCATCCTACTACCCCTTACTACTCTCCCAAGGTGAGGATCCCATCTCATGCTTCTCTGAAAAAGAAAAAATCTGAAACACCTCTATAAACCAAAATAGACTGTTGCAAAGTAGTAGTTGAGTGAACTACATGTACATGTATCAACATGGCTAAATACCCAAATTATGTGAAAAAGGTAAATTCCAAAACGTCTGGCAACAGTCTACTGTGTGCTGTGCTGTGCTGTGCTTAGTCTCTATTGTCTCCAAATCATGAGACCTGGTGGACTACCCCACCAGGCT EMBV3_09399 AGGACGCGTCACAACTCATCTTTCCCAAAGCTTGCTGCTCCAGAAGAAGCTTCATAAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27138 GTTCTCCTTGACGATGTCCTCTCAGCAGAGCGCCAAAGGCTCTCCCAGGGGCTCTTCGCA Gene GeneID:774026|CRCT1:NM_001077520:175_cdna Constitutive 0 NULL GeneID:774026 3 GENE CRCT1 MGC155044 cysteine-rich C-terminal 1 EMBV3_07625 AGGAACCTGTCGGTGACACCAAGAAAAAAATTTATTTACGTGAATCAGTCCTTTGCCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25106 GGCCTGAAAGTAGAAAGTGAGAAGAAAGGTATGGACCAGTTGCATTGAGGGATGAAGAGC Gene BVT0102_446416 + 1 EMBV3_31580 GK000007.2:63267312-63294620 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213882 TCONS_00213883 TCONS_00213884 1 XLOC_130563 Coding TCONS_00213882 XLOC_130563 Coding Coding SLC26A2 7:63280881-63301727 j TSS160118 5918 1 TCONS_00213882_4 734 4 0.716286879347565 2.20193852280815e-07 3.46443831159802e-10 0.000210497654229197 0.000132152116085431 4.76904156059135e-11 5.07747646292142e-08 9.15093131670091e-05 9.70664249328802e-05 5.71661184994756e-05 0.000138436265721616 0.000297621395037775 0.000198641219417069 0.00032046371886166 0.000206956053012413 0.000125376432036626 4.22609674904169e-07 0.000135356347435224 0.000364609833795955 5.78671841030118e-05 0.000228287672803336 1.20122482524997e-07 0.000275616490282418 9.99793891957596e-05 0.000406422709135596 0.00014346660880224 1.13193861705782e-07 9.09518074952219e-05 0.000150447532154492 0.000144306372329642 0.000170357312696226 XM_005209573.1 SLC26A2 PREDICTED: Bos taurus solute carrier family 26 (sulfate transporter), member 2 (SLC26A2), transcript variant X1, mRNA. 0.0 1.067e+04 100.00 0.999831023994593 NM_000112.3 anion exchanger Homo sapiens solute carrier family 26 (anion exchanger), member 2 0.0 3153 82.22 0.528894896924637 TCONS_00213882_4 sp|Q9BEG8|S26A2_BOVIN S26A2_BOVIN Sulfate transporter; 0.0 1511 99.86 0.998637602179837 3 coding 0 0 0 0 -0.123824824806742 0.406659920100858 -0.012425917030696 0.786928680568296 CCGCTCGCGCCACGCTACCGCCTCAGTCCCGCCACGGCGGAGGACGCGCCTTGGAGCCGGGTCGCACGGTACGGCAGAGACTCGAGAGGTTTGGAAAAGCCTTTTGACCCAGAAATCACTAAGAGCTATTCCAAAATAGAATGATGTAAGGAATGCACTCAAGCAAGCTTGGCCTGAAAGTAGAAAGTGAGAAGAAAGGTATGGACCAGTTGCATTGAGGGATGAAGAGCTGCTGTGTGTTTTCATCAGTCTGATTGACTTGCTCAGGAGGCTGAAACATCTGTCTCCAGAAATGTCTTTGAAAAATGAAGATCAAAATGACCTTTCACCCAAGGACTCAGTTAAAGGAAATGACCAGTACAGAGCTCCATCTGGGATCCATCTGGAGCCTGAAGAGGAATCACGTAATGACTTCTGGCAGTTTGAGCCCAGTAATCTTTTTAGACACCCTAGGATCCATTTGGAGCCTCAAGAGAAATCAGATAATAACTTCAAGAAGTTTGTTATCAAAAAACTAGAGAAGAGCTGCCAGTGCAGTTCAACCAAAGCCAAAAATACCATTTTTGGTTTCCTTCCTGTTTTGCAGTGGCTCCCAAAATATGATCTGAAGAAAAACATTTTAGGAGATGTGATGTCTGGCTTGATTGTGGGCATCTTATTGGTGCCCCAATCCATCGCTTATTCTCTCTTGGCTGGCCAAGAACCTATCTATGGTCTGTACACATCGTTTTTTGCCAGCCTCATTTATTTCATTTTGGGTACCTCCCGTCACATCTCTGTGGGCATTTTTGGAATACTGTGCCTTATGATTGGTGAAGTAGTTGACCGAGAACTATACATAGCTGGCTATGACACTGTCCATGCTGCTTCAAATGAGAGCTCATTGGTAAACCAGATATCAGACAAGACATGTGACAGAAGTTGCTATGCAATTATAGTTGGCAGCACTGTAACCTTTGTGGCTGGAGTTTATCAGGTAGCAATGGGCTTCTTTCAAGTGGGCTTTGTTTCAGTCTACCTCTCCGATGCCTTGCTGGGTGGATTTGTCACTGGTGCCTCCTTCACTATTCTTACATCTCAAGTCAAGTACCTCCTCGGACTCAGCCTTCCTCGGAGCGCTGGAGTGGGATCACTCATCACTACTTGGATACATGTCTTCAGAAACATCCGTAAGACCAATATCTGTGATCTCATCACCAGCCTTTTGTGCCTTTTGGTTCTTTTGCCAACCAAAGAACTCAACGAGCGCTTCAAGTCCAAGCTTAAGGCACCGATTCCTGTTGAACTCTTTGTTATTGTGGCAGCCACATTAGCCTCTCATTTTGGAAAACTGAATGAGAAATATGGCACCAGTATTGCTGGGCATATTCCCACTGGGTTTATGCCACCCAAAGCACCTGACTGGAACTTAATTCCTAGAGTGGCTGTAGATGCAATAGCTATTGCTATCATTGGGTTTGCTATCACTGTATCACTTTCTGAGATGTTTGCCAAGAAACATGGCTACACAGTCAAAGCTAATCAGGAAATGTACGCTATCGGCTTTTGCAATATCATCCCTTCCTTCTTCCACTGCTTCACTACTAGCGCAGCTCTTGCAAAGACACTGGTGAAGGAATCCACAGGCTGTCAAACTCAGGTTTCTGGTGTGATGACAGCTCTGGTTCTTTTGTTGGTCCTCTTGGTCATAGCTCCTTTGTTCTTCTCCCTGCAGAAAAGTGTCCTTGGTGTGATCACCATTGTAAATCTCCGGGGAGCCCTATGTAAATTTAAGGATCTGCCCCAGATGTGGAGGATTAGCAGAATGGACACAGTTATCTGGTTTGTTACTATGCTGTCCTCTGCACTGATCAGTACTGAAATAGGCCTGCTTACTGGGGTTTGTTTTTCTATGTTTTGTGTCATCCTCCGCACTCAGAAGCCAAAGGCTTCATTGCTTGGCCTGGTGGAAGATTCTGAAGTCTTTGAGTCCATGTCTGCCTACAAGAACCTTCAGGCCAAGTCAGGCATCAAGATTTTCCGCTTTGTGGCCCCTCTCTACTATGTAAACAAAGAATATTTTAAGTCTGTCTTATACAAAAAAACTCTCAACCCAGTCTTAGTAAAAGCAGCTCAGAGGAAGGCAGCAAAGAGAAAGATCAAAAGGGAAACAGTAACACCCAGTGGAATCCAGGATGAAGTTTCAGTGCAACTTTCCCATGATCCCTTAGAGTTCCATACAATCGTGATTGACTGTAGTGCAATACAGTTTTTAGATACAGCAGGGATCCATACACTGAAAGAAGTTCGCAGAGATTATGAAGCTGTTGGCATCCAGGTTCTGCTGGCTCAATGCAATCCCTCTGTGAGGGACTCCCTGGCCCGGGGAGAGTACTGCAAAAAGGATGAAGAAAACCTTCTTTTTTATAGTATATATGAAGCCATGACTTTTGCAGAAGACTCTCAGAATCAAAAAGAGAGACATATTCCCAATGGTCCGAATTTTTCCAGTGATTGATTGAGAAGGTAGATGGAAGGAAGAATCCTGTCTAGCCAATAGATTAAAATTTCAAGTGTGTAGCATCTTATACTGTGGAACTGGAAATTGCTGCACACAAGAAATTTTAACCTTTTGGCTAGGCAGAATTCTTCCTTTGAAGTTGATGGCCTTTGTAAATACAGAAATGCAACAGAGCTTTTAGTTAGGCAGAATCAAAAAAAGAAAATGTGGTTTCAAGTTTTCTCTCAAATATGAGATATTCTTGGAATTAAATATCTGTTGAACTGTAAATTAGCCCCAAACCTAATTACCATCCTGTTTTAGGAGATATGCATCTGAACTCTTGCTTCTCCAGGAGGTAAAGGGGTAAAGCTGGCATGTACATAAGAGGTGCTGGAGCCTGTTTGGCATGGCTCTTTGGAGAGAGAGGAGAAAGGAACTAGGGAAAGAATGTATGTCTTCTCTTGTAACAGCAAGTCAAGAGGCTTCTGGAGTGCAGGGTAGTAACTAGACAAGCTTGTTCTCACTTGAGCTTCTCTATCCCCTGTCTTTGCTCTCCAGATGGCAGTCAGATCTCTGGCTTTTTACAGGAAAGTATCGTTCCTCTCTGGCACAGTCTTATCAGGAGTCTGATGGCAGAGCAGGTTTGGGAAACCCTACCAGTCAGTCCCACATTATACAGAACGCTCATGGTGTGATACAGTTGATGTTTTTAGTCAGCCTTTTTGTTTAGGGTAAGTAGGTGAGAAAAGAGCTCTCCATGCCAGTCAACATAGTGAGAATCCTCCCTGTCTCTTCTGTGATTCCTGTCTGTCCTTGTTTCTGAGTATTAATCTGCCATTAAGCTCTGTTTTAACTTTCATGTACTGTGTTTCCCATGGAATCTGTTCTAAACCGCTATGTTTGATTGCCAGTGAGTGACAAGTTTGCCAGAGAAAAGGCACAGTGCTGACTTAGCAATTTCATGTAGCTTTTTAAGTGACCTTGAGGCAAACTGTTCCAGACAGATTGCAAAAAAGGAATGATTGACAACTTCCCTTAAACATTTTTAGTAGTGAATTTTTCTTTCCTTCCCGTGTTTAGCAAGAGTAAACTGGGAATTGACAGTCTTTCTCATATTTGAGAAGCTACTATTCATTTTTAATCTGTAAGAAAAAATTTATTGTGACCAATGGAGAAAAATGCACAGAAGTGACAGAATGCTTCCAAAACAACCATCAATAATTGTCGATGTTTTAGTGAAAACAAAACTAATGCTCACTGCTACGCACCCTGTTGATGTGTAATAAATACTGATGACAGTGACCACTTTTCGCTTTTTGGGCCACCTAAAACCATTGTGTAAAAGGATTTAGAAGCATCATCTTCATACAACATATTTTCTTTGGAAAAGTATGTCCAACATTGAAAGCTTATAGTTCTGTATCTGGACCTTTATGGGTGAGGGAAAAAACCAGATTTTCCAAACTTTGGATTAGGAGACTGGTTTATATGAGACTGAAACATTTAGCACACCATTTTAAACAAACAAGATAAAAACCACGAAAGTGCAAAATCATTTTTAACCCATCCCTACATTCTAAACAGTATGTTTATGAGAAACAAACCCTGTGTATAGCACATCTACTGAAATGGGAGACTTTTAAACATCTTTCTTGTTGGCTCCATAAACTGCAAGTGTTGATTTTCTTTTGAGAGAGCTCTGCCCATCAGTTTACATGAAAAATGCCTTCCTATCATTAAAGCAGTTTCTCAGGAGCTAGATTTCTCTCTTTGAGGTGATTTACATCACGATTAAATGTAATAGTGTCCTTAGAGTTTTGACATCCATTTAGAACTTAAGTCTTGAATTTCAGAAATGTTAACTGCTGTTTGTATTTGTGTCTCTTTTGTTTATTGTTTGTAACAAATATTTGCTCTGTCTCTCCAGTCTTAGATGAATAGGAATAGTAAAATCAAAGTATCTTGGTTGTCATTTGTTTTCAACCCAGTCTTGTACCTCACCCGAGCCAAGTTTTGAATCCAGATCATGGTAAATACCTAATGCCATGTGACAGAGTAATGAGTACATGTTCAAGATGACTTTATAGTTTAGCAAACCTTACCATGGGGGAATTAAAAAAAAGAGTCCAAAGAATTTAGAAAATCTCTTAAAAGAACAGAATAACAGGCTTTGACCTTTACCTCCCATTTCTGTCCAAAATGTAGATATAAACAATTCTGGAACTTTCTGCAATTAGCAGATTCTTGAATTGTGTTCTGGTTTGCTTTTCTCCTATCTACCCGAACAAATAAGACATTCTGCTTTTGGAAGCCATTTGTAAAAAATACTGAAGATACACTAGAATTTAAATCTTACCTTGTCTGCTTGGTTTGAAATCTGCCTGTACTTTCATGTTAAGATTTTTTGATTGCTGGTATTTAAAGGAATCAAGCCTGAAACCAAAGCCAAAGGAATCTGCTTTCTTGCTCAAAGGTTTGGTTGATTTAGTTGATTAGGTGATATTTTATACACTTTATTGACACAAAATGTCTTGTTTACTCTGAACTTTAGAGTCTAACTGAGGCATATTTGTATTGCTTATTGATGAATGTACAAAATTCTGAATATCTTAAAATGGTCATTTAATTGAAATGTATGTACACTCTTGATGGTTAAAACTCATACAACCAGAGGGGTAGAGTTCACCTAGAGTCAAAGGGTAATATTCAAGAGAGAGGTGAAGGGGAATAGACTATTAAAAAGATGATCTCTGAGCAAGCAAGGGAGAAGAGGGCCTCAGATGAATAGGATTCAACCCCTGGTTAGCTTCATACATGACTGTCCATAGTAGGGAGACCAGGATTAAGAGCCACAGCTTAGTCTGAGAGCAGACTCAGAACTGGATTCTGCTTCTAGAAGGGGAGTGCACAGATTCACCAAAGTGAAAGAGCTGGTAGCCAAGGTTGAGGCCAAAGCCGAGGTTGACCTACTGCAGAGCTCTAGACTGAGTGACTGTTGCCTCTGATAGCAGTAAAACTGACAGATGTCTAATTGACTTTTTTAAGGAGCAAAGGAAAACAAAATTTGGATAAACTGACATAGCTTTTAAACATCAGTAGACACTGAAGCCAAAATTTACTGGTAAATTTATAGCGTGGTAAATGGTGATCTTTAAATGGTGTCAAAATATTAGATGAATTCATTAGACTATTCTAATGCTCATGACCACATTTTAACAAGAAAAGTAATTCTCTGCAGGGGTATTCGGTTAGTAATTTGTCACTTAAGAACACGTGGGGTGTTAGCCCTGAGCTTAATATAAAAGTGAGAATAGGGTTGTAGTGAATTTTGGGGGGACTTAAACCTAGAAGTTATAATGATAAATTCAAGCTTTGTGCTCCGTATTCATGTTCTTGTTTTCCTCTATGTATTCCTAGAGATGAGCCGTGTAGACAG EMBV3_36342 GAAATGTGTGTGGCATAGCAGAAGCGACATATCTGCCTCCAACAAGACGGGTGTTCTCTG Gene BVV0102_183195 + 0 NULL GK000005.2:49333348-49348466 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32340 TTCATCGCTGTGAGAAGCAGTCTCCTGGAGTGGCCAATGAGCTGCTAAAGGATATTTAGT Gene BVV0102_176021 + 0 NULL GK000001.2:44774073-44855021 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15413 TTCAGCAGTCAGAGACACTGAAGGATTTGGGAAGGGGTGTTGGCTTTCATTACACAGGAG Gene BVV0102_117554 + 0 NULL GK000018.2:2917648-2944864 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085251 1 XLOC_051823 Coding TCONS_00085251 XLOC_051823 NonCoding Coding - 18:2926941-2933902 - TSS63707 6961 4 TCONS_00085251_3 94 0.544031030024422 1 0 1.41724148907217e-97 5.66404678146871e-111 0 0 2.72136509731611e-172 4.37601488390191e-05 3.73723778945334e-06 5.08127770084042e-05 1.86351880149906e-06 7.93674481849383e-05 0.000107189782689385 1.51669428594778e-05 7.7353733572567e-06 8.2896795863177e-167 9.13067494179776e-90 0.000912174784748943 4.49262573693303e-116 5.26384757612101e-05 0.000238153164675287 1.84762952871576e-05 1.99148325231288e-141 0.000576954165418398 6.88362733710597e-05 0.000540353467911846 6.86049929829059e-06 5.85155344537129e-281 2.43363927811397e-06 3.92890228895882e-05 2.40106586956091e-05 0.000158246681118577 XM_005218364.1 ADAT1 PREDICTED: Bos taurus adenosine deaminase, tRNA-specific 1 (ADAT1), 0.0 3131 100.00 0.249245798017526 0 noncoding 0 0 0 0 -0.0229222013835042 0.868870043303965 0.0429468242157328 0.460845839538633 CTTTGACCTACATTTTTCATATTTATGAATGGCTGGAAGTTTTGGCAGGAGTGATGTTTCAGTAGGCCAATGAGTACTTAGTACTGACCACATGCTCTTCAGTCCCTATAGCTGCAGACATGTGTGTGATCTGAGATGTGATGGGGACATAGTTGGTGGGACAGAGTCACAGAGCCTGTGGGTGGAATTGGGCCCGGCCCATCTCAGGCCCTCCTTTAGTCCAACTCCAGGTGGAGAGCACTGTGAGAATGTGAGCGCTGAGGTGTCAGTGTATGCTGTTGGGAATATCATTCTCTTTTTCTTTTGTTCAATCAGTGGTTGTGAACTAAAGCTCGAGGACTTAAATTAGTTTCCAAACAGGAATGTAGAGACTATAAAACCACTTGATGAGCAGGTGGGTGGGGGGAGTTCATACGCTAACAAAGTCAGGCCAAATCTCACTGGGTAAGGGCACAGTGCCCACAAACTGACCTCACTTGGTAACACCAGCCACAATCTAGGGGGCCCCAAAGCCACTCAGGTTCCAACTACCCACTCAGGTTCAATAATTCACTAGAAAAACTCACAGAACTCAGGAAAGCACCATACTTTGAATGCCTTTTATTGTAAAAGATACAAATAAGGGCCAGATAAAAGACAGGATGCACAGGGCAAGGTCTGCAAAGGTATCCGGCCTGCTACTTCTGTGTCCCCAGGAGGCATCACCTGCCCAGCACATCACTGTCTGTCACCGACCAGGAACCTGCCCCACGTTTCAGTGCCCAGTGTTTACTGGGGCTTCCTCATCCAGCATGAGTTATGGAATCACTGGCCACACGATGTGACTGAACTCAATCTCCACCTTCTCCTCTCCCCACCCCAGGATGTCAGATAGCAGATGACTCAGGGCCCCAGCTTTGTAATCTCATGGCTGATCTCTCAGCCACAGCCAGCCCATCCTGAAACTATCTAGGGCCCACCATGAGTCACCTCGTTAAGTAAAAAGTTGAGATCCAAAGGGTCCACCATGAATAACAAAGACACTCCTATCACCAAGGAAGTTCGGAAAGTTTATAGGTTCCCTCCTAGGAAGTGGCAACAAAGACCAGCCAAATCCTTCTTTATACAACAGTGGGGAAGCCAGGGAGTAGCTGGACACTCGTATGAAGAGGCTGCTGCCTGTTTGCGGCATCGTGTATCCTGCAGTCGGTGTCGATGCCCTCCAGCCATCCATGGTCAGTTTGCTTGTTTCTTGTCTGGAAAAATCAGTCAGATTGGAACTGGGTGGGTTGCTATACATTCTATGCCTTAAAAACAAATCTGGACTTAGGTAAGGAGAGACGTCATTTGAAGGCTTTGTTGCAGTAAGAGACAGGGCCTGTTTCAGCAGGTGGAGAAGGACTAATGCAGTAGCAAGAGCATCGCAATCTTAAGGTCTGTAAGCCTCTCGAAGAGCAGGCGCAAAGGAGAAGTTTTGTCTAAGCAAAGTTAGAGCTGGAAATGTGGGAGTGAGGTGAGCAGGTAGTGTGACAGGACCATTGAACAGGAAGTGTCAGTCCTCAGGAGGGGCTTTTAAAAGAAAGGGTTGGTACACCTGCCTATGCCGGCTCAGAAAGAGTGGCTCTAAGTTTTGGGGTCTGCAGGAAGGAGAGAAGCATAACTGGTAATTAATATTTGGTCAAATTATCAGGCATTTTGATGAGATTTTGTCAGTGGGTACAAACAGTTCAGCTAATCAGTAAGAGACAAAAAACAGGTGTTTGGAGGGTTGTGTCTGGCCTTGTCACAGGTAAACCAGGGGGGCACCCATGAGTCTTAAGTCATGAAGAAAGGTGATTCTTTCCAGTCTGCCATTTCCCACACACAGGAATACAGGAGGGAGGTTTCTTAACCATCGCTTGTTTTAGGAACTGAGGGCTCAGGTAAAGTTTAACTTTGTCATGCGTGTAGCTCCCATCCATTAACCACCAAAAAGCTATGGGAAATTGATCAAAGAACTAGAATCAGTGTCTGCTACAATTAGCAACTCGGCTCTGCGCTGTAGCGAGTGAAGAAACAACAGGGGTCTCCTAAGATCTTTGCAAAGAACAAAAGAGTAGAAGCAGGGTAAAACCTGACTCAGTGAGCTGCGAGTCTCAGTTTCTTCAGCTGTGAGATGACAAGGACGTAGTTCAAGGTCGGGGCTGGGTCAGGAAGAGGACTTTGAGAAGCCTGACTCAAATTTGATCAAAGGAAAGAATCTTTGTCTCAAAAAAATCTTTCTATCTGAGTGTTAAGTGTTACATTACTCAGCACATTAGCCATTCTTCAGCAGTCAGAGACACTGAAGGATTTGGGAAGGGGTGTTGGCTTTCATTACACAGGAGAATATGACTAAGATGAAAAGTACTTTGGGAAAATGCAGTTGAGAAGTGTCTAACGGCTGGATCCTACCAGTGAAGATTATAGCCATGTAGAAAACTTTAAACCAAGTAGTAGATAACAGTTACTCTTTTTTATCTGATTCCACCAGGACCAAAAAAAGAAAAGAAAAAAAAACAGACTGTTTATTTTTACCTATTTTAATCCCATGTTGTTTTCTAGTGAATTTCCTACAAAGGAGCTAAGAGTCACTCTAGGACAGCATAACAGAATCCTTCTGTTCCTAAGACTCTCCTAATAAATCTGTCTGGCCAGTTGCGGAGGTATCTCTCTGGCCGCGGTGGTGAGCTGTCCATTGAGAACGTGTGTGCTTGGTGGTGTGTGTGCATTAGGGCGCAGAAGCTAGCGACGTACCAAGAGTACAAGGAGGCTGCGTCCACGTACCAGCAGGCCTGGAGTGCGCTCCGGAAGCAGGCGTTTGGATCCTGGATCAGAAACCCCCCAGACTATCACCAGTTTAAATGAGCAACAGCTGTGTTCCATTCATTCATCCTGGACTACTGTCTTCCTACATGCTGAACAGGCCTTAGATTTTCTTGTGGCTGATCAGGAAGAAAGACTGCCGTCTACCAGAGCGGTAGATCTCTTCTATGTCAGATGGATGGAATTTTGGACATGAAACAAACTATACTTGATTGAACTATGCTTTCAAACTGTGATGCTGGAGAAGACTCTTGAGAGCCCTTGGACAGCAAAGAGATCAAACCAGTCCATTGTAAATCCTGAATAGTCATTGGAAGGACTGATGCTGAGGCCGAAGCTCCAATATTTTGGCCACCTGATGCAAAGAACGGACTCATTAGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTAGAAGGGGAAGAGGGCGACAGGATGAGGTGGTTGGATGGCATCACCAGTTCAGTGGACATGAACTTGGGCAAATTCTGAGCGATGGTGAGGGACAGGGAGGCCTGGGGTGCTGCAGTCCATGGGATTGCAAAGAGTCGGACACTACTTGGCAACTGAACAATAATAGTACTTGATTGAAGTAGCTCTCTGCTAAAACAGCATCTTGCTAATGACCTTGGTGTGCGTCCTGTATTTTATTGCTTCTCTAAGAACAAGAATTTGGAATGTGATGCTGTAGAAGTACTCTGCAGTAGCTCCATTTTGTGTGTTCCTCGTTGATTCAGCAAGTATTGGGCTGACATGATGTTTGAATCTCTGCAAACTTTAGAGCCTCACCTGTCATAATGGACATATATTTTGTATACCCAGCCTTGCTTCCTTTGAAGAACCACTCTTTTCTGCTTTATCCCTGAGACTCGGGTGAAGTGAACTTTCCTCATTGACTCCAGCAGTGTGAGCCAACCCTGAACAGTCCTGGAACTAATACCAGAGCGATCAGGAAAGATTCCCTCTCTTCTCGTATTGGGAGCTGTGAGCACCAGGTAACCCGGGACTGCCTGGGGCTGCTTTTGCCCACTTCCCAGAGACAGCCAGCTGGAGAACAAGGTGTTGAAGGAAACAGCCCAGAGGATGAAGGCTTTCATGACCTTGTCTGGGTGCCTGAAACTAGTGCCCATTCTGGACTTCAACGATGTGAGATAAATTGCTCTTGTTATTTTGAGTAAGCCCCTTTGACTCCGTTTTCTGTGACTTTCATTGGAAAGAGTTCTGTCTAAAAGGCCAAACAAAAGTCCCTATAGCAACTCAGTAGCACACCTAGAAACCAGGCCTGTTTTTTCCTAACATCTAGTATTTAACTCGGAGAAGGCAATGGCAACCCACTCCAGTACTATTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTGGGTTGAAGTCCATGATGTCGCTAAGAGTCGGACATGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTAGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTTGGACACGACAGAAGCGACTTAGCAGCAGCAGCAGTATTTAACTCTCAACCTCTTCACACTCTAATATACTGACTGAAAGTGGAAGTTCTCTGTGTTGGGATTACTCAAGGACCTTGTTCGTTCTTCAGTATTTCTTTATAGCTTTAAATATTTTTAATAACAGCTTTATTGAGCTGTAATTCACATACCAAAAAATTCATCCATTTAAAATGTACAGTTTAGTGGTTTTCAGTATATCCACAAAGATGTGCAAAATCACCACAATCGATTTTAGAACATTTTTGTTCTAAATTGGGGGTGGTGGGTGCTATCTGACCCAGTACAGAACCCATTAGCAGCCGCTCTTCATATCCCCTCAACACCACCACTAACCCCAGGGCGAGCACAATCTATGTTGTGTCTCTGTGGATTTGCCTATTCTGAACATTTTATATAAATGAAATCATACAATATGTGGTCTTTTGTGACTGGCTTCTTTCATTTAACATGATGTTCTAAGACTCATAATGTTGTAATGTGAATTGGTAACATCATTCAGTACTTTGTTCCTGCTTATTGGATAAAAATTACATTCAGTTCTATGGATATACCACATTTTGTCATCTAATCATCAGCTGATGGACTTTTACGTTATTTCCACTTTTTGGCTGTTGTGAATATTGCTGCTATAAACATTCATGTACAGGTTTGCATGTGAACATATGTTCTTAATATTTTTTTATTGCAGAAATAATACATAGAGTTTCTTTTTTTTTTTTTTTGCCTTTTTATCATTGTAGCTTTTGGTGGGGATGGGGCAGGGAGGGGAGGGCAGTGGTGCGGCTTGTGGGATCCTACTTCCCCAATCAGGGATTGAACCTGAGCCATGGCAGTGAAATTGTCAAGTCCTAGCTACTGGACTGCCAGGTAATTCCCCCATAACTTTCTCATATTGAGTTATCTTTGAACCTTTTTCTATGAGGAATCCTTTTAGGTGGGAGCAAAGACAAAAACCTCACTACCGAAGGCCACACTTCCCACATGCTGCTTTAATCAACCCTTTGCCTGACCTGACCCCAAATCCTATGATATAAGACACCTCAACTGGCAGAAGCTCTTATCCACAGAAGGTTATGCATCACTCTCATGAGATTCTGTTTTCAAAGACAAAGATTTATTTGAGAATGTAAGGAATTAGTGTCTTTTCTTTCCTAAAATTTATGGTGTTTGTCACATGTGTACACAATGTGAAAAAACACCCATCAATTTAGACTTGAGAACAGAGACTAGGAAACCCTGAAAGCTAGAGACCAGAGGCGTCTTCACTTTGAACTCTGCCTGTTTTGTCAAGAGACAAAAGGAGAGCTTAGACAGCTCACTCCCTATGTTTTGCTTTAATCTCTTAAAAACCCAAGATTAGAATCTCACCTGTGCCTTAAAATCACATCTCTGCAATATTGGCAGGTTCTCAAACTTCATACATTTAGATCATGTGTTTTTACTGATAACCACTTCCAATTTTTAACTACCTTTTAAAAAGAAACTTCTTACAGAAATTTTTAAATAGACTCAAAAATAGAAAAAGCACAATCACCTCCATGTACCAGTCACCCAGACCAAACATCCATCAGCTTTATGCTGTTGTTGTCTGATCTTTTCCCCCCTCCCCTCCAATTCTGTTTTTCTTAGAACATTTTAAACTGAATTCTAGCCATCCTATTCCACCCAATAAAATTAACAATCATTCTTTAATATCTACTATGCAGGCTGTGTTTAGTTTCCCTTATTGTCTCAAAAATGTGTTTTGACTACTGATTTGTTCAAATTAGAATTCAAACAACATCCGCACAGTGCATTGGGTTGATGTATCTTTTGTGTCACTAAATCTCTAGCAGTTCACTCCTTTTTATGTCCTTGACAGATGGGTCATTTGTCTGGTAGACTCTCTCCCATCCAGGATTTGGCTGCTTATTTCCTCCAGTGTTGATAACCGGTTCCTCTCCCCCTCATATTTCCTATAAATCTGTGGTTACATGAAGAGGCTTGATTACAGCCAAGTTCAGTTCTTTCCAGGAGATTCTGCATACTTCTGTTACATTATATTAACCTATGGGAACATGACATCAGGCTGTCCCACTTTCAGTAACTAATCAGAGAGTTCAGTGGTACCAGCCTGATCCAACCCCTCACCCTCACCCTTTCACAGAATGGTTTTAGCAGCTGTGTCTTGAGGTCCCCAAGACCACCCTCAGATTGAGACAGTAGACAGACTCACAGAACTCAGAAAAGCTACTGTCCTCAGAGTTACCATTTATTACAGTGCAAGTCAGCAAAGAGAAAGGCGCGAGGGGAAGAGGGTCTGCTCAAGCTTCTGGTTGTCCTCGCTGTGCCAACGCTCCTGGTGTCTCTGGCATGACATCTTTGCCTTGCTCACCCTGGAGAGCCTGCCCGTCCTGGAGCTAGCCAGTCCCGAGCCCGCTTTCCCAGCCCGGCCCCTGACGGTCCCTTCACACTGATGGCTCTTGCCCACATTTCCTCCTCACCCCCAGTGCCTCGTGACCCACCCTGGTGCTCCCACGTGTGGCTCCTCCTGGCATGGCCTGCCCC TCONS_00085255 s 5' 0 TCONS_00085255 s 5' 0 EMBV3_36383 GGTAATAACTTTGACCAAATCACAGCTGCTCCCAGGTGTAGCCTCTTAGGTGGCCCTTTG Gene BVV0102_200420 + 0 NULL GK000018.2:55371101-55373994 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084163 1 XLOC_051475 Coding TCONS_00084163 XLOC_051475 Coding Coding LOC510613 18:55366538-55372422 = TSS63106 2738 1 TCONS_00084163_3 419 0.222425127830533 5 0.535441101478837 3.97537309926238e-05 2.20198888935623e-05 3.71782273459773e-05 3.94280936929818e-05 0.000108192448574243 4.04999145721618e-05 3.41340675977529e-05 7.88481936918139e-05 0.000179137811459942 2.43233332399302e-11 0 0 0.000167671675314232 2.23478300102429e-05 1.7235835471337e-11 0.000106109500593035 0 0 3.98165844966044e-11 3.55019455415261e-11 1.66306626806895e-06 0 0 0 0.00031884110252037 0.000447739976028831 8.98773628562475e-05 0 0 0 XM_002695190.3 LOC510613 PREDICTED: Bos taurus zinc finger protein 470-like (LOC510613), 0.0 4938 100.00 0.99963476990504 NM_018083.4 ZNF358 Homo sapiens zinc finger protein 358 (ZNF358), mRNA. 2e-34 152 67.91 0.210007304601899 TCONS_00084163_3 sp|P17020|ZNF16_HUMAN ZNF16_HUMAN Zinc finger protein 16; 5e-96 306 44.88 0.720763723150358 7 coding 0 0 0 0 -0.0404831035788776 0.858900377574682 -0.0193833230884233 0.777811659540155 GGATGCAGACTCCTGTGAATCCGCAATATACCTGAACCGAAAGGAGTTGAATTCTGACAGAGAACAGAGGCTCTGAGATGTGGGTGAACAACAGGTGCAAACGCCCTATTGACGGAAGAGTCAAGGACCTACTTGCAGAAGGAGGGTCTGCCAGTTATGGAATCACCCAGAGCCCAAGAGCTGATCAGGGATAGACTCCACCTCATGAAGCCGGGAGATGGAGAAGTGGATCCCGGAGAACCCCCAGACTGTCTGGGGTTTGATCCATCTCACCTGAGGACACACCCTGAGGATGCTGAGGACCCAGAAGAAGAGGCGCCCGGAGGAGCCGAGGCGGAGTCGGGGACCCTGGTGCAGCTCATCGACGAGCACGGGGCGTACTCGACCGCGCGCCTGGTGCCCGACGGTTCCGTGGAGGAGCGCTCCGAGAAGAGGGGGCCAGGCTTGCTCGGCGCCGGCTCTGAGGGCTGGGAGGGGCTGGCACGGCCCAGGCGATTCAGCTGCGCCGCCTGCGGGAAGGCCTTCAAGCGCGCGTGGGAGCTGCTGAGCCACGAGGTGGTGCACACGGTCGCGCGGCCCTTCCGCTGTGGTCTGTGCGCGGCCGCCTTCAAACGCCACTCGGACTGCAAGAGTCACCGGCTGGTGCACAGCGACGAGCGGCCGCACGGCTGCGACGCCTGCGGCAAGCGCTTCAAGCGAGCCAGCAACCTACAGGAGCACCGCCGCATCCACACGGGCGAGCGTCCCTTCCCCTGCCAGTCCTGCCCAAAGCGCTTCAAGACCCCCTACGAGCTGCATCGCCACGAGCCGCTGCACGCTCCCTCGAGGCCCTTCCCCTGCCCGGACTGCGGCAAGGCCTTCGCGGCAGGGCCGGCCCTGCTTCTCCACCGGCGGCAGCACTGCGTAGACAAGCCGCACGCGTGCGGGGTGTGCGGCAAGCGCTTCACCCACAGTCACAGCCTGCGGGTGCACGAGCGTGTGCACACGGGCGATCGGCCCTTCGTGTGCCCGCTGTGCGCCAAGGCCTTCAAGCAGTCCAACGCGCTGGCCTCTCACCGCCGCGTGCATTCGGGGGAGCGGCCCTACCGGTGCGCCACGTGCGGCAAGGCTTTCAAGCAATCGTCCTACCTTGCCATCCACCGGCGCACGCACACAGGCGAGCGGCCCTACCCCTGCGACGCCTGCGGCAAAGCCTTCTCCAGGCCCTCGCTGCTCCTGCAGCATCGCCGGGTGCACAGCCCCGTGCGCCCCCACGCCTGTCGCTTCTGCCCCAGGCACTTCAAGGACCTGAACTACCGCGCAGTCCACGAGAGGCTGCACACGGGAGACACGCCCTACAAGTGTGGTCTCTGTGGCAAGGGCTTCGCGCATCCCAGCAACCTGCTGCAGCATCAGAGCGTGCACCCGGATGGGTGAGGGTGGGGTGTGGGGCCGCGAGGAGGCCAACGAGGGCTCCAGAGCTGGAATGGGAGGGAACCCGGTCCAGTGGACGCCGGGTTTCGGACAGCGCCGTCCAATAGCATCTCTGCAGAAACACTGTGCATCTAGGTGGTCCAGTATCTTAGCACCAGGCCCCTGTGGTTCCTTTGAGTGTTTGAAACCTGGTTAGTGCCCCTGTGGACATGATTTTTTTTGGAGGGGTGTAACTTTTTAGTTTGCAGTCCTTTAGACTCACAAGAAGTTGCAAAGATTAGCACAGAACTTTCCCATGTACCCTTCACCCAGCTCCCTGCCATGGATACCATCTTAGCCTTCCTGGCACCATGTACCTGCGTGCATGCTCAGTCCTGTCCGATTCTTTGCGACCCCCTGGACTGTAGCCTGCCAGGCTCCTTTGTCCATAGGGTTTCCCAGGCAAGAATACTGAGTGGGTTTCCATTTTCTTCTCCAGGGGATCTCCCCGACCCAGAGATTGAACCTGTGTCTCCTGCACTGGCAGGCAGGGTTTTTGTTTTTGTTTTTACCACTGAGCCACCTGGGAAGGCTCAGCATACTCCCAATAACCAGGAAATTGATTCTCATAAGATTCTGTTAACTCAGGTACAGATCTTACTCAGAGATCACCAAAACATGAGTGACTATTTAAGCTCACTGAATTTAAGTCAATTTCCATTTAAATAGCCACCGGTGTCTACTTGCTGCCATCCTGTACAGTGCAAGTCTAAGGCCTGAAGGCATGAGGGGTGCTGGGCAGTGGCTGTGACATTTGAAGAATTGTTGTACATGCCCATGTGAGCCACTTAATATTCTTGAGAAGGACTTTTCAGAGGACCTTTAACAGAGCCTTTTTTTTTTTTTTCCCTTTCAAAGCCAAGAGGAAAGTTTATAAATCTCATTCCAGGGCAGAAAGTGCCCACATTGAAACCCAACACACTGGTATTATGTGGTGTAAATTTACATGGTAATAACTTTGACCAAATCACAGCTGCTCCCAGGTGTAGCCTCTTAGGTGGCCCTTTGGCTGTTTCGGCTTTCCTTATAACTAAAACATCAGTGTGGTAATGAGGTCATGTGGTCATCTTGTGTCTTCCCATGCATAAAAAAGCGCTGAATTCCTTCACTTGGAATATCTGGTTTTCCTTAAATAACAATAATCATTTGATGTTCTGACTACCTGCCCTTTGTTGCAAAACCTCTGTATGACCTGGGTCGTCCCCTTGCCTCCTCAGAGCAGTTCTCTCAGTGTCATTTGAGATGCTGCCTCCCAGGCTTGAAGTCCTAAGAATTCCCACCGAATA EMBV3_14116 CTACCAGTGTGATTCTGTTTTTAGTTCCTTTTACTCATGTTTAGCATAGGCTTTTAAGTT Gene BVT0102_227139 + 0 NULL GK000004.2:19915668-19966016 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186180 1 XLOC_112233 NonCoding TCONS_00186180 XLOC_112233 NonCoding NonCoding - 4:19919688-19920729 - TSS138548 1041 1 0 6.53490919479167e-05 2.89580047720497e-05 7.11162449519292e-05 7.97709125070944e-06 0 0 5.60202191757004e-06 2.84087601084382e-05 0 3.95244183835841e-06 2.19902580654942e-06 0 2.75627428199468e-06 0 0 0.000938740119338455 1.59483928931113e-05 0.000385642897223094 0 6.90820313728635e-06 0 4.98987324454689e-05 0.000396572374719038 0.000966260076130801 1.33112056886715e-05 0 1.68851566709225e-05 6.45881016117381e-05 9.3268078892052e-06 5.77544884399479e-05 XM_005249789.1 TMEM106B PREDICTED: Homo sapiens transmembrane protein 106B (TMEM106B), 0.0 737 77.73 0.939481268011527 0 noncoding 0 0 0 0 -0.176003306103471 0.463961325851377 0.0486881412679753 0.377289509842341 ATATTTATATACTATAGGGATAAAAATGGTAATTTTCATTTTTAAAAAACTACCAGTGTGATTCTGTTTTTAGTTCCTTTTACTCATGTTTAGCATAGGCTTTTAAGTTTAAAAATACACTGTGGTCTGTATTGACCCAAAAAGTATTCCATAAATTAAACAAATATATGGCAAGTTTTTCATAGCTAAATCTAATTCTTCTAGAAGGAAGTTATTGCCTTCTATTTAATTACATTAATTGAAATGTGTTTAAGAGAAATGTTTTCAGCATATTTTGTATACTAAAAAACAAAAGGGGTTAGTATTGGGCCAATGGCCAAGAGGTAATGTTACTACCTTGTAGACTGTTACAGTTCAAATTGTCCCACTCCCCCCAGAATTTTAGAAACTAGAAATCTGGGAGATACTATGTCAGCTGTAGTCAGTTGACTCTTAAATGCTGTAAGCTGTATTCATCTTTTGTTACTGTGTGAGACGGGAAAAATGCCACATTGCAAAAGATGCATAATTTCATTGTATAATGATTTATTTTAGGCATATAATATCAGGAAGCTTTGTCTTGTGTGTTTTGTCTTGTATTTCCTCATAGAACTAAAGTAAGTAAGATTTGGGGAAATGATTTTAAAATGCTTTCTGACTTGACATGCTTGGTCAGAAATTGTTGGCATCGGTGGGTAGGTTCTAACCAGTGATTTTAATTGTGCAATAAATAATAATAGAGTGTGAGACTATGTTTGGGCACTTACTATTTGTTTATATTAGGTATTAGCCTCCATTGTAATATACTTACTAAATTTCCAAGTTGAACAGTTCTGTAGTTAATAACTATTGTTGCTGTACCTGTAACAAAACATACTTATGACAGTAAAATGAATAGAAGTGCCCCCAAATACTATTTTTTAATTCACTTGTAACTGTTCCTCTTGTAATTGTGTATGACAAAATCAAATTTGTAAAAATTTTAGCATGAAAAATAAAATTTGTATCAGTCAAGTGTCTTGGTTATGCTTTTGAAATTGATTTTTTTCATCTGCTTCGCTT TCONS_00180979 . 3' 2400 TCONS_00180979 . 3' 3440 EMBV3_14842 CCAACTTCGATTATCTGCTTCAGAACTATGGGACTTCTTGGCAGAAGGCGTGTTCACCCT Variant GeneID:506151|JMJD4:XM_002688513:47_cdna 695^857 1 EMBV3_21512 GeneID:506151 7 GENE JMJD4 NULL jumonji domain containing 4 EMBV3_08080 GACTCAGATCGCCACTGAAGTCCCTGGCAGCTTTAGCTTTTGCTTCTAAGCTTCTTCAGG Gene BVV0102_120978 + 0 NULL GK000010.2:6433553-6470641 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22601 AGTCACTTAAAGACCTGGTTAAAGAAAAAGGGATGTGCTGTTGTTGAATTCAAGATGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38793 GAAATTTTGACTTACTGTTTCTGTGGATATGCATTCCTAAAGAGTTGGTAAACTATTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39849 TTGCGGACTACGAGAGTGGCCGGGCCATTCCCACGCGGCCGAGCGGAACATGGGCGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35817 TCAGCCAGAAGTCACACCACATTAGACACCAGAAAATTCATACCCATTAAAACCCTGTGG Gene GeneID:100138954|LOC100138954:XM_002695025:293_cdna Constitutive 0 NULL GeneID:100138954 18 GENE LOC100138954 NULL similar to ozf EMBV3_21335 GAGATTAATTTTTCAGGTGCCTTGAGTGTTTGGGGTGAAGGCCCATGTGTCTGACCGAGG Gene GeneID:539227|RAB3GAP2:XM_002694004:311_cdna UTR3_Alt 2 NULL GeneID:539227 16 GENE RAB3GAP2 NULL RAB3 GTPase activating protein subunit 2 (non-catalytic) EMBV3_38304 AAGGTGCTCAAACAGGCTTTCGGAGAGATCATCACCATGACCATTCGGGACAGGCCCTTT Gene GeneID:789095|LOC789095:XR_084056:80_cdna Constitutive 0 NULL GeneID:789095 23 PSEUDO LOC789095 NULL similar to Syntenin EMBV3_41813 ATCTTATAAAAGTTACAGTTGCACCATTTGATCCAGAGTTACTGAAAAACCCTCCTCCCT Variant GeneID:539983|S100PBP:NM_001034687:163_cdna 665^722 1 EMBV3_31850 GeneID:539983 2 GENE S100PBP MGC128690 S100P binding protein EMBV3_15652 GAGGCAGTGTACTGGCGTTTGGAACCAGAAAGATGAATTACCTATTGAAGTGGACCTTGG Gene GeneID:516731|RMND5A:XM_002691358:198_cdna Constitutive 0 NULL GeneID:516731 11 GENE RMND5A NULL required for meiotic nuclear division 5 homolog A (S. cerevisiae) EMBV3_11015 GCCACCAAAGCACCTAAAAAGAGAGACTGAATGATCAGGACAGAACAGTTCACTGAAGCA Gene BVT0101_012101 - 1 EMBV3_02423 GK000008.2:61021658-61157468 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31198 GAAGAGACTAAGAAACCGGAAAAGTGTGGTCTTCACCTCAGCACGAGCCACCGAGGCATA Gene GeneID:509027|CA14:XM_002686050:265_cdna Constitutive 0 NULL GeneID:509027 3 GENE CA14 NULL carbonic anhydrase XIV EMBV3_02774 GTTGCTTTGTATGCATTAACGTTTGGGTGTAAAGATTGTGTGTCTATCCAACAGGGAGCC Gene GeneID:327708|RAP1B:NM_175824:16_cdna UTR3_Alt 2 NULL GeneID:327708 5 GENE RAP1B NULL RAP1B, member of RAS oncogene family EMBV3_39582 AAGGCCGCCCTGGCTGATTACAAACTGAAACAAGAACCCAAAACAGGAGAGGCCGAGAAG Gene GeneID:514789|ISCU:NM_001075683:5_cdna Constitutive 3 NULL GeneID:514789 17 GENE ISCU MGC140639 iron-sulfur cluster scaffold homolog (E. coli) EMBV3_03761 TAAAAACTGTAGGGAAGTGATGGGGAAGAGGTAGCGGGGAGGTGCGTGTGTTCACAGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15540 TGAGTTTCTAGATCTGGGGCCTTCCTGACTGCTGCTCTCTGTCAATGGGGGGTGTAAACA Gene BVT0102_432764 + 0 NULL GK000016.2:36979968-37106631 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29412 ACGGACATCAAGGGCAAGGAGGTGATGGTGCTGGGAGAGGTGAACATCAACAACAGTGTA Gene GeneID:281350|NGF:NM_001099362:2_cdna Constitutive 0 NULL GeneID:281350 3 GENE NGF NGFB nerve growth factor (beta polypeptide) EMBV3_40866 GGAAGAGCTTTTACTTTGCGTGCCCTTTAAACCCACTCACTGCTCTGTCAGGGTGTCCAT Gene GeneID:785309|LOC785309:XM_002690599:48_cdna Constitutive 0 NULL GeneID:785309 10 GENE LOC785309 NULL similar to hCG1793330 EMBV3_42098 GGGAAGAACACCTAAAGAAGAAATGGGCCCGGTGGAGAAGCATGTTCCAAAGGCAGCCAA Gene GeneID:100336679|LOC100336679:XM_002699415:71_cdna Constitutive 0 NULL GeneID:100336679 29 GENE LOC100336679 NULL Anoctamin 9-like EMBV3_21957 GGCCTGTATAATCAGTTGTTCAGTGGAATTTGTACAGAGGCTCAGAAAAAAAATATTGAA Gene GeneID:536190|LOC536190:NM_001102374:23_cdna Constitutive 0 NULL GeneID:536190 6 GENE LOC536190 MGC142425 gamma-aminobutyric-acid receptor beta 1-like EMBV3_34432 TGTCTCCTGTGGACCTGTTGGTTTCACCCAGAATCCAGTTCTCTTCTGAATGTGCAGCTG Gene GeneID:511516|FAM127A:NM_001075522:8_cdna Constitutive 0 NULL GeneID:511516 X GENE FAM127A MGC140692 family with sequence similarity 127, member A EMBV3_30898 TTTCCTGATGCTCTCATCACCAACTACTATGTTGGCTGTGGTCCAGTGTGTTGCTGTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28125 CCACACTTGTGGCTAAAATGTCATGTTGCATATGAGGGATGATTGACAGTTCTTCTGGCC Gene GeneID:100336989|LOC100336989:XM_002688073:97_cdna Constitutive 0 NULL GeneID:100336989 6 GENE LOC100336989 NULL hypothetical protein LOC100336989 EMBV3_13694 GGTTCACTGGGCACTTGAACTTCCAAATTGAGCACCATCTATTTCCCACAATGCCACGCC Gene GeneID:615051|LOC615051:XM_002693733:468_cdna Constitutive 0 NULL GeneID:615051 15 GENE LOC615051 NULL similar to rCG26407 EMBV3_11170 TCAGGTAGTGTATCCAAGGCCCTCTCCACCTTGTCAGCTCACGTCACTGTAGTGGTCTTA Gene GeneID:504344|LOC504344:XM_002690772:548_cdna Constitutive 0 NULL GeneID:504344 10 GENE LOC504344 NULL similar to olfactory receptor MOR245-21 EMBV3_07343 GAAGAGTTTCTGGATCCCTACCCCCGTCTGTCCTCTTGACATGAAAGAGACTCTGAGACT Gene GeneID:509439|NECAP2:NM_001015562:108_cdna Constitutive 4 NULL GeneID:509439 2 GENE NECAP2 FLJ10420 MGC134076 NECAP endocytosis associated 2 EMBV3_32105 TAGACAACAGCGTACAGTGGCTCAGTGGTAAAGAATCCGCCTGCCAATGTAGCAGACATG Gene BVT0102_104017 - 0 NULL GK000004.2:75021706-75086127 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34927 CCCACCTCGCGAGCACAGTGTTGTGTATGTGGTTCTTTGTCGTACTTTGTTCTAATTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37309 GAAGCCCCTGGCAGTCTCAACTTTTCGCCTATGAAGCCAAATCCCGATCCTTTCCAGGAT Gene GeneID:790258|BOSTAUV1R434:XM_002695493:252_cdna Constitutive 0 NULL GeneID:790258 18 GENE BOSTAUV1R434 NULL vomeronasal 1 receptor bosTauV1R434 EMBV3_35481 GGGTTCGTTATTGGAATTAACCTGGTGCTGGATATTTTCAAATTGTATCTAGTGCAGCTG Gene GeneID:280795|FOS:NM_182786:2_cdna Constitutive 1 NULL GeneID:280795 10 GENE FOS MGC139881 FBJ murine osteosarcoma viral oncogene homolog EMBV3_35906 TAAGGAAGCTACACTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGCCAGATCACTAAGCG Gene GeneID:281685|CHRM3:NM_174270:2_cdna Constitutive 0 NULL GeneID:281685 28 GENE CHRM3 NULL cholinergic receptor, muscarinic 3 EMBV3_19392 GTATCCTCCCCATTTTATAGACGAGAGACTGAGGCTTACCAAGTGTAAGGGGCTTGACCG Gene GeneID:100294994|LOC100294994:XM_002686395:245_cdna Constitutive 0 NULL GeneID:100294994 3 GENE LOC100294994 NULL hypothetical protein LOC100294994 EMBV3_05982 CGATGATAGTGAAGAAAAATCTGTGGCAAGTGTGCGTCGGAGAGGAAGAAAGCCCAAGCG Gene GeneID:508527|BOD1L:XM_002688464:32_cdna UTR3_Alt 2 NULL GeneID:508527 6 GENE BOD1L NULL biorientation of chromosomes in cell division 1-like EMBV3_00344 CTTAGATATCAAAATGGTTGGGTTTCCCCCCTCCCTAATTTTAAGAGGCAGGCATATTCC Gene BVV0101_042571 + 0 NULL GK000013.2:78002014-78054501 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16141 AGAGACTCCAGAAAATTCCCTTACTTCTTCCGCCGTGTGGGGACTTAGGAAAAGACAGCC Gene BVT0102_258352 + 0 NULL GK000028.2:12925585-12963716 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159041 TCONS_00159033 TCONS_00159038 TCONS_00159036 TCONS_00159042 TCONS_00159044 1 XLOC_097339 Coding TCONS_00159041 XLOC_097339 Coding Coding ZNF33B 28:12885923-12931296 j TSS119274 1980 1 TCONS_00159041_1 164 0.513636363636364 6 0.95649299127215 1.16155216439487e-50 8.95328218432175e-33 6.60633654209059e-15 2.30956623178063e-16 2.54119978521312e-18 6.18238483230051e-19 2.09308018934015e-12 4.74979895519741e-35 2.00509489953962e-10 1.87633663500778e-16 6.99112427152097e-94 2.2993350620067e-11 3.56934042146531e-32 6.8563657157387e-18 2.56039911244675e-10 0.000596932605143807 2.25753478039509e-18 0.00117414090123623 5.61093924883126e-07 2.81471577762047e-12 8.51645729016759e-15 0.000449703071779055 5.30639915219727e-08 0.0010439521237257 1.91200418755329e-12 4.04087253089254e-77 8.64347670050299e-18 3.33384577200422e-33 4.19265443911292e-53 1.11975408821284e-18 NM_001075810.1 ZNF33B Bos taurus zinc finger protein 33B (ZNF33B), mRNA. 2e-164 583 100.00 0.162626262626263 NM_006954.1 ZNF33A Homo sapiens zinc finger protein 33A (ZNF33A), transcript variant 2e-133 480 86.21 0.204545454545455 TCONS_00159041_1 sp|Q06732|ZN33B_HUMAN ZN33B_HUMAN Zinc finger protein 33B; 1e-61 206 79.03 0.75 1 coding 1 0 0 0 -1.05262264198316 0.0027476306563885 0.00073232759533734 0.987510962521203 ACTCTTCTGGGCTCAGTGCCCCTTGGAGACGGAGAGGCGAGTGAGCTCAGGATGGCTGGTTGAGGACCGTAGGGGTTCCGTGCAGTTTAGGGAGTAGGAGGGAAAAGCTTTAATAGGAAAGGAGAATTCAGGAACTGCCACACAGGCCAGATCTTTCATGACTCCAGGCCTCTTCTTCTAACCCAGTGTATCTTCAGAGTTGTCTACGTTTTTCCAGGAACAGCCAAAAATGAATAAATCGCAGATTGAACAGAAATTCCAGGGATTAGTATCCTTTAAGGATGTGACTGTGGGCTTCACCCAGGAGGAGTGGCAGCACCTGGACTCAACTCAAAGGTCCTTGTATAGAGATGTGATGCTGGAGAACTACAGGAACCTTGTCTCAGTGGGGTTTTGTATTACCAAACCAGAGGTGATCTTCAGGCTGGAGCAAGGAGAAGAGCCATGGATATTGGAGGAAGAATTCCTAAGCCAAAGCTTCTCAGAAGTCTGGAAAACTGATCACATGAAAGAAAGGAGCCATGAAAACCAGCCTAAACATGTATGGGAAGTTGTATTGATCAATAACAAAAGGCTGACTAAAGAACAAGGTTCCGTGATGTGGCAGAGGCTGCTTGGGATGGAACCACCAACTGCTGGCAGGCTTGCACTTCGGCCTGCTCTGCTCTGTGTTCTTTTTTGGATGTTGCTATCTCTTCCCACTCTAAGAGGCTCTTGTCCCTAAGAGAATGGTTCATTGGCTGTGCCCCCTGCATGACTTGCCATGGGGTTCAGTGTGTTTGGCAGGTGGTATCTGAGCTACCTGTGAGGCCGGCTTCTGGACCATGGTACTTGCCCTTGTAACTACCCAGAATGTCCACATCAGGGGTGATGTACATGGCTAGAAGTCCAGAATAACTGAGGAAATTTGTATGAGAGAAATAAGAGAGAAAGAAACCTGCATGGCAGAAAAAGACAGCCGTAGCAGACAGAGGATGTTAAGTCAGCCAGCCTCTCTGGGTTATGGGCCCAGCATGCTTTTGCTTCACCACCTGTTGTGTCTTTTTTTTTTTTTTTTTTAAAGAAAAAAGGTTCTGCACTCATGGTTAGAGGACAAAACTCCTATCCTGTGGTGCAGCAAAGAGGTTAATTCAAATGCAGCTTAAGCCTGGGATCCTTGCACCATGTGAAGCAGCCATTGCCATGGAGCAGGCCCCTAACCCTTTCCTGAAGAAAGAAATTTATAAATTTGATCAGAGTAAAGAGAACCCTCCTGAAGTGTAGCAAGTAACCACAGAAAGAAAAGAAATGGAAAGAATGAAGGGAGGGAGGGAGGCAGAGACTTAGATATGAGGAGAGTAAATAACAAAATAACTGAAATATAGGTCCATAGTTTGTTTTTGAAATTGAGATGTGGTTTCTGTACAATATTATATAAATTATATCCACAGTTTGACTCAATTAGAAATCCAGAATATACTAAAATTATTTGTACAACAAAAGATAAAAGGGTGCTGATTGGCTTTTGTATCTTCCAAATTAACTTGAATATTAACGTTAATGCTGAAGTGTGTACCATTGGTAAATTTTCATAGCCTTAATACAGGGCTCAAGTTATAGTTATACCTGGGAACCCCCCTAAATTTAATTATGTTACCCCCTAAAATCTTAGAGGTGTTATTGAATATAAAACACAGTGTTATACTGAAATTCCCTCCAAAATTCATGTTGAAATCTAACTGCCAATATGATGGTATTTCGTGGCAGGGCTTTTAGGAGTCATTCAGTTAGGAGAACAGAGTCCTCATGAATGGGGTTAGTGCTCTTAAAATAGAGACTCCAGAAAATTCCCTTACTTCTTCCGCCGTGTGGGGACTTAGGAAAAGACAGCCTTCTGTGAACAGGAAGCAGTTCTCACCAAAAAAGGAATCTTTTGGTGCTATGATCTTGGACTTCCCAGCCTCTTTAACTGTGAGAAATAAACTTTTGTTGTTTATAAGC EMBV3_29570 ACTGTCAAATGGGATACAGAAAGGCAAATGTCCCAGGAGAAGGGGGAGCAGAGAGTCCCA Gene BVV0102_313408 + 1 EMBV3_33865 GK000011.2:427686-483847 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25044 TCTTGCTAACTACTTGCGTCTTCTCAGAGGTCAGCCAGATCTTTTTCCTGGGCTCTGGCT Gene GeneID:507731|CDC25C:NM_001097996:7_cdna Constitutive 0 NULL GeneID:507731 7 GENE CDC25C NULL cell division cycle 25 homolog C (S. pombe) EMBV3_03265 AGAATCGGGTTACTATTCATCCCCGGAGCGCAGCGAGTCTTCGGAGCTGCTTGACAGTAA Gene GeneID:519892|NUAK1:XM_002687657:22_cdna Constitutive 0 NULL GeneID:519892 5 GENE NUAK1 NULL NUAK family, SNF1-like kinase, 1 EMBV3_09522 CTCCTCAAAAGGCAACTACGCTGGTCGTCCCAGAAACATCGCAACATTGGAGTAAACTGG Gene GeneID:519172|BLOC1S2:XM_002698428:393_cdna Constitutive 0 NULL GeneID:519172 26 GENE BLOC1S2 NULL biogenesis of lysosomal organelles complex-1, subunit 2 EMBV3_32763 GCGGTTGAAATGAGGTATTGTGTGTTAAGTGCCTGGCTAGGAGACAGCAGTGGGCGTTTA Gene BVT0102_162291 - 0 NULL GK000010.2:46570990-46705795 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017136 TCONS_00017127 TCONS_00017130 TCONS_00017137 TCONS_00017128 TCONS_00017135 TCONS_00017138 TCONS_00017134 TCONS_00017129 1 XLOC_008973 Coding TCONS_00017137 XLOC_008973 Coding Coding USP3 10:46521309-46573276 j TSS11780 2858 2 TCONS_00017137_4 131 0.0885234429671099 5 0.945098718392795 0.00152516033028754 0.000258553902222536 0.000726461662504317 0.000885782243356127 0.000485633414904536 0.000122539591403808 0.000755242839735044 0.000425397268722094 0.00162467763502515 0.000122961079886793 8.68955930305956e-18 0.000572908539343114 0.000366345898901948 0.000328205418270683 9.56091843040338e-21 5.21326182170132e-05 1.41726940514677e-92 0 0.000297648696649589 0.000534174542006426 4.38955317031579e-13 5.53331594899806e-85 9.6506030095982e-54 4.90359827470638e-20 0.00175373807910519 0.000645477157717822 0.00111365185319458 7.90870423385893e-15 2.85199866060748e-15 5.55957897757293e-89 XM_005211684.1 USP3 PREDICTED: Bos taurus ubiquitin specific peptidase 3 (USP3), 0.0 2973 100.00 0.576277116864941 NM_006537.3 USP3 Homo sapiens ubiquitin specific peptidase 3 (USP3), transcript 0.0 859 91.96 0.207487753673898 TCONS_00017137_4 sp|Q91W36|UBP3_MOUSE UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3; 3e-84 259 95.24 0.954198473282443 1 noncoding GGGGCAGACAAGGGCATCGCACACCTGGAGGGAACCAGGATGTGGAGCAGGGTCAGGAAAGGCCCCCTTGAGGAAGTGATGTTTAAGCTGAAATCTAGACAAGGAAACTGAGTCTTCATGAGGGTGAAAAAGGAAACATTACATGCTAGAGGGCAGACCAGCATGAGTTCAGGGCATGTTTCAGGGTTAAATGAGGGGGCATGAATGATAAATGGGGGTAGGTGTCCAGAGGGATAGAACTTGATCCAACTAGTCCTTGGATAAGAATCGGTTGATAGGAGGAGAGGGTTGGGACAGCCTGAGCTGAGGTCACATTTATTGTTTATCCTCCCTCTTCTTAGGAATTATTCTCTCACCTGCTGCCATTTTTTAAAGCTATATTTTAAAAACATTTTTAATGTAAAAACTTTTAATTTCGTTGTTGGTTTAGCCACTTTTATTCAAGCATTATTTGCAGCATTGGAAAACTGTAAATTATTGACTACCTACTATGGGGGTGGCAATTCTCATGACTTCTCACATCCTTTTTGTGAGATAAATATTACCTTCCCCATTTTACAGATGGAAAAAAAAAAGGCTCGGGAGGACTAGAAATACTTGCTAAAGTTGGTCATCAAGTAGGCAACTGAACTAGGATTTGAGCAGCTGCAATTTCCACAACTCTGTCACTGTCATAAAACCTCCAAATGGCTTGCTCTAAAGCAGTCAAGTAAAACTTGGGAAGCAACCAAAGACGGTTGCCTGAGGAGTCGGAAATACTAGAGGGATATGCTGTGGGGGAGGAGGGGGGAAGTGTCCGCAGAGATGCTGCAGGTGAGTGTACACCTAGGCAGGGGATCGCGCGGCAGAAGCAGAGCGGCGGCTGGTGGTGCGGAGGATGGCGAGGCGTGAGAGGTGACTGAGGGCATCCCTCGACTGCTCCAGGACTGAGTACGGGGAGGTGCCCCGCTCTAACCTCTTCCCGGCCCGGCCCGGTTAATCATTTCCTGACCCTCCTTCCTCCTCTCTCCCAGCCCGCAGGATTGCCACATCAACCTCCCCCCTCCCCGCCTCCTGGCCTGTTGCTCCTTCGCCGGGTTTTACAAGGAGCCCCAACTTTGAGGCATTTTCTAACAGCCCGGGACGCCCTCAAGGCCGTTTCCCGGAGAGGTCGCAGGCTCGCTTGGGTGTAGCGCTTGCCCTAGCGGCCTCTTGAGGCTTGCCCTATGCTCTTTTTTTGGACTGAGAGGTCGGAGAGGCGGGATCCAATCCCGGCGCGGATTAACTAATTAAAGGCTCGGTTTCCCCTGCGGTAAAAAGGGAGGATGGTAACAGCAGCTGGCGGGGTGGTGCGCGGTTGAAATGAGGTATTGTGTGTTAAGTGCCTGGCTAGGAGACAGCAGTGGGTGTTTAACAAACGTTAGATCCCTTCCCTTTTTATCACCTCATCAACGGGACCGCCCGCTCAGCAAACCTAGGTTACAGCTATCTCGCTTAAACTTAAACTGGACGTTGAGATCTGAATGTCCGATCATATGCTCGAGGTAATGCCAATAGTGATTCATAGTGACAGGGTTTGAACCCCGGTTCACGATCGCCCCCGCCATCTCGCACCTAAGTGGCTGGCTAAGGCCACATGTCTAGAACCTAGTCCAGAACTAGAACTTAGTCAGTATGGTACCTGCCGCAGGGAGCAGACCACTAAACCAGTACTGTTCTGGGACCCATGCAGCCTGCTGGGCCACCGGGGGCCAGGCCTTTAACCTCTCTGAGTCTGAGCCACAGTGTGTAAAGTGGGGGCTCTCTGTCTGCCCGTGTGGTTTTTATTTTCTTCTTCACACTTTCTTTCGTGACCAGATTTTCTACCCCGGGGTAGTCAGACCATCTCATTACGCTGGATCAGTGTTTTCTGACTGCGAGAGCTCGCCCAGGGCGGGGAAAAAGCAGCGGACCGGCCCAGTGTGCCCAGGCTTGGCGCCCCACCCTTCTCGGGGCCGGGGAAAGTCGCGGCTGCTCGGGGCAGCGGAGTTGGGAAAGTCACTTCAGAGCGCAGTCTGACTCTGGGCCACCCGCCTGCGAGCGCGCGGACCCCACCCAGCTGGGGAAGACGGGGGCGGGGCCGGGCCTGGAGGCGGGGCCTGCCCAGGGGCGGGGCCGGGCCGGCCTGGGAAGACGGAAGCCCCCAACCTAGGGGTGGCGGCAGGACCCGGATCCCGGAGCACCACGTTTTCTGGAGCCGGACATCTAGAGACGGCGGGAGAGAAAACCCGGCTCCCGGAAGCTTTTGCTTTCTTTGACGCAAGGGCTCGGGACGCAGCCGCCGTCGGCCGAGCGTCGGGCGAGGAGCGACCCCAGACGGAGTCGTCGGAGTTCCTCCGCCCCCGCCTCGCCGGGTCCCGGAGCCTCAGTCCTCGCAGCTCTTCTGGTGGCCATGGAGTGTCCGCACCTGAGCTCCAGCGTCTGCATCGCTCCGGACTCAGCCAAGTTCCCCAACGGCTCCCCGTCGTCCTGGTGCTGCAGCGTGTGCCGGTCCAACAAGAGCCCCTGGGTCTGTCTGACTTGTTCAAGTGTCCACTGTGGAAGGTATGTGAATGGCCATGCAAAAAAACATTATGAAGATGCACAAATACCCTTAACCAACCATAAGAAATCAGAAAAGCAAGAAAAAGCACAGCACACAGTGTGTATGGATTGCAGTAGCTACAGTACATACTGTTATCGCTGTGATGATTTTGTGGTTAATGACACCAAGCTGGGACTGGTACAGAAAGTCAGAGAACACTTACAGAACTTGGAAAAGACCAGTATTTATCACTTGAAAATATAGGAAGCTGTGAAATGCTTTGTCATCATAAAGAAATTAAACTACTGTGAATAGT EMBV3_10119 GCATGTGGACCTTATCGACCTCGACTTGTGTAACTCGACCAGATGGTACAATGGGCGCAT Gene GeneID:280711|ACR:NM_173886:10_cdna Constitutive 0 NULL GeneID:280711 5 GENE ACR NULL acrosin EMBV3_12224 TGTGGACCTTGGTTAGTGAGCAGACACGAGTAAATGCTGCCAAGAACAAGACAGGAGCTG Gene GeneID:781777|RPL27A:XM_002687905:56_cdna Constitutive 0 NULL GeneID:781777 5 GENE RPL27A NULL ribosomal protein L27a EMBV3_12854 AGACGTCCAAGTTCTACTCTCAGCTCGTAGTGCTGCTGGCCCTGGCGGCCTGGCTGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04853 GGGAATGGGGGGAAAGGCTGTTAGATTAAACAACAATATTACACCACCTGTCAGGCCAGG Gene BVT0102_313761 + 0 NULL GK000012.2:11329121-11363089 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01179 AAAGTAGAGGCTAAATCTCCAAATGAGAAGCCACTGGCCCCAGAGAAGCCGGATCCTGGA Gene GeneID:517383|GPRIN1:XM_002689010:56_cdna Constitutive 0 NULL GeneID:517383 7 GENE GPRIN1 NULL G protein regulated inducer of neurite outgrowth 1 EMBV3_01596 TCGTTGCTCGGATCAGACAGAGTCCTAAGAATGTCCCCAGCTTCCTACCCAGTTCGTTCA Gene GeneID:518356|SH3PXD2B:XM_002696270:70_cdna Constitutive 0 NULL GeneID:518356 20 GENE SH3PXD2B NULL SH3 and PX domains 2B EMBV3_25189 AGAGATCGCTGAGTTGGTGCCACAGCTGCACAATGTTGTATGCACAGTGAATCTTGGTTG Gene GeneID:538929|LOC538929:XM_002691357:195_cdna Constitutive 0 NULL GeneID:538929 11 GENE LOC538929 NULL similar to TBP0 EMBV3_03087 CACAAAGCGGTGAGCGAGATCAGTAAACTTCGACCATCCCCAGAAAGAGACGCCCTCATA Gene GeneID:509696|PDSS1:NM_001100331:85_cdna Constitutive 0 NULL GeneID:509696 13 GENE PDSS1 NULL prenyl (decaprenyl) diphosphate synthase, subunit 1 EMBV3_06927 CAAAGGACCCTGGACAAGTCTCTCCTCCTGTCATCAGTGCGAGGGCTTAGAGTTACAGAT Gene GeneID:514398|SLA2:NM_001035294:1051_cdna UTR3_Alt 2 NULL GeneID:514398 13 GENE SLA2 NULL Src-like-adaptor 2 EMBV3_26009 TAAGCTGTACTTGTCACCCCGAATTGAACAGGGTGTCGTGGAATATGATGCAGAAGGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36834 GGACTGGAAAGTCCTATCAAAGTTTTACCTGCTCAGGAATGGAAACCTCCTCTGCCTGCT Gene GeneID:536075|TXNDC16:XM_002690464:363_cdna Constitutive 0 NULL GeneID:536075 10 GENE TXNDC16 NULL thioredoxin domain containing 16 EMBV3_03436 CATCTTGACAGTGAGTTGTCTTAAGCTTGGCTCGCTCCCCGAGGCCGTGAAGTGGGTGCT Gene GeneID:533516|RBM38:XM_002692420:391_cdna Constitutive 0 NULL GeneID:533516 13 GENE RBM38 NULL RNA binding motif protein 38 EMBV3_41876 GCTCTGGGAGTTCTTGAGCTTTGCCGAAAGGTACCCTACCATCGTCTATAACATCCTCCT Gene GeneID:353217|SLC35B1:NM_181338:44_cdna Constitutive 1 NULL GeneID:353217 19 GENE SLC35B1 ERNST MGC128601 UGALT2 solute carrier family 35, member B1 EMBV3_14759 AGCCGCGAGGCCAATATTCCCTATCAGCTTTTCCGCTGGCAGGTTGTATTTCGAACAACA Gene BVV0102_093489 - 0 NULL GK000006.2:62298884-62464239 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21367 TTAGGGTCTGAAAAGCCAGGCCTGGCCCGGGGCGCAGCCAAGAAGGCCCCCAAGAAAGGC Variant GeneID:527400|H1FOO:NM_001035372:128_cdna 133^561 3 EMBV3_01755 GeneID:527400 22 GENE H1FOO NULL H1 histone family, member O, oocyte-specific EMBV3_28663 AGTGTCAGCCTCTAGTTAGCACTGTGAGGAAGGGTGGGTCTAGTCTCTGATGTGGACCAA Gene BVV0101_045098 + 0 NULL GK000024.2:51331232-51769684 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32955 AGTTCGACTTGTCCAGGATCATCCCCTCGGAGAAGCCAAGCAGCACCCTCCAGTACTTCC Gene GeneID:539340|BCL9L:XM_002693127:559_cdna Constitutive 0 NULL GeneID:539340 15 GENE BCL9L NULL B-cell CLL/lymphoma 9-like EMBV3_27948 CGAGAGAGCCCAGACCCTTGCCCGCGCGGTGTACGTGGCCCGACCTGTCCTGTGCCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40307 GCTAGATGAACTTGCAATCCTTTGGGTCCTGATGTGTGCTTTGGCCATGTGGTTCCCCAG Gene GeneID:540732|ACER2:XM_002689563:17_cdna Constitutive 0 NULL GeneID:540732 8 GENE ACER2 ASAH3L alkaline ceramidase 2 EMBV3_35209 ATTTCTATCTCCAGGCTATCACTCTTCCTTGCGTTCCACAATATGTAGGACCATGCGCAG Gene BVV0102_294451 - 1 EMBV3_32942 GK000009.2:101510192-101942118 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236484 TCONS_00236482 TCONS_00236483 1 XLOC_144483 NonCoding TCONS_00236483 XLOC_144483 NonCoding NonCoding - 9:101797036-101805128 - TSS177021 1432 1 TCONS_00236483_3 101 0.337290502793296 4 0.823507601038191 1.9002132897945e-05 5.44339399898712e-12 9.69343417412179e-05 8.40813037361975e-05 0 1.20419863117229e-12 0.000117656530520462 0 7.89954394760158e-12 8.31496740475004e-12 8.95523202627585e-13 0 6.70796110314038e-12 1.88952390735857e-12 0 0 0 0 2.94881010604331e-05 2.72773881855617e-05 1.12817232612588e-12 0 0 0 6.96241030930597e-05 0.000290339071092176 0.000102892102970125 1.47408584153717e-11 1.06960068601642e-11 0 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 3e-28 131 72.20 0.125 0 noncoding GGTGTTGGGTAGCTCCTCCCGGCCGACACCCCTGACCTCGGACGTGGGGTAGCTCCTCTCGGCCATGCTTCTGCGCATGGTCCTACATATTGTGGAACGCAAGGAAGAGTGATAGCCTGGAAATAGAAATTGAGGTGGATAAAAATGTCAGCCTCTCCTTCTGAACTTGATGGAGTCTCTGTGTCCATTCGTGAGAGTGGGAAGAAGGATGTCCAAGATGCTGAGAGAAGTCAGCTCAAGTCTGAACGGATCGGGCTTCCTCGCAAGGAATCTTCCTGATTCAGAGATCAAACCTGGGCCTCCTGCATTGCAGGCAGATGCTTTACCATCTGAGCCACCAGGAAAGCCGCTCTTCTGCAGAAGAACTTCCCAACCCAGGAATCAAACCAAGGTCTCCAGCATTGCAGGCAGATTCTCTACCAGCTGTGCTACCTGGGAATCCCCAACCAATCAGCTAAGCCTACACATCAACTAAGTGCTTCTCTGCTCAGCACAACCACTTGTCCAGCTCCAAGACTTCCCTCTGCTCCATGAAGAGAGAGTAACCCAGTTTTAACCAATCAGCCCATGCCCAGCGTAACTTCCTTGTTCTTGCTCCCCTTGGTCTATAAAAATCTCTCTTTGTACAGCTCTTTCATGGCAACTTTCTATCTGCTAGACTAGGTGCTGCCCAGTTTATTAATCACTGGATAAAAGCCTACTAGATCAGTAACTTGCGGAAATTTTTCTTCTAACACAAGAGGACGCAGCATCAAACAACACCAAGAATCTCCAGTGTTTTCTGGGACTTTTCAGAAGTGGGGCTGACACTTTCTCAAGTGTAACATGATGCTTTTTACCCTCTGTAGGACTAAAACAAAAAGCAAAAAAACCCCCAGAAAACCTTAACCTCCACCCCCACCCCGGGCAAAAAAAAAAAATACAAAAGCCCAAAACAAAACAATCTACAAGAAAGCCTGAAAGCCTCTGATTCCTGGAGAGTTTCTGAGATGTCTTCAGGTATTACTGCTCTTCAATCAGCATCACTTTTAATCTTTGAGGCTTTAACTGCTCTCACACCCCAAGCACTTTTAAACTAAGACCTGAGGTGTGAATGGCACCCTGTGGTCAGGGATCAGGGCTCTTGACTTCCTAGGTCTTAGCTTTTCCACAGAACCACATTAGTGATCTCACTAACAGCACAGTGGTGTCAGTTATTTTGAAATAAGAAATCATACTATTCCAGCATGTCTAGTGAATCATTAAAATATCAACTTTGTTGATTCGGAATTACATGCATAACTACATTTCAACCTTACTCCTTGTCCTAAATTATACATTTTTTTTCCTTCTTAACTCTGATTGCCATCTTTAAGTATTTCGTTTTCAACATAAATTAATATATATCCTGGTTTCCCAGGTGACTCTAGACGTAAAGAACCCGCCTGCCAAT TCONS_00238195 r 3' 136991 TCONS_00238195 r 3' 145082 EMBV3_22690 AACGGCCCTTCAAATGTGAGAAATGTGAGGCAGCTTTTGCTACGAAGGATCGTCTGCGGG Gene GeneID:100296937|LOC100296937:XM_002698088:106_cdna Constitutive 0 NULL GeneID:100296937 25 GENE LOC100296937 NULL similar to POZ (BTB) and AT hook containing zinc finger 1 long C EMBV3_42149 GAGAGCAGTGCCTACCTGGCTAACTCCGCACGCATCCACCAGAGAAATCAGTCATAAGAA Gene BVT0102_068387 + 0 NULL GJ060117.1:1-5428 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41858 ACTGGAACCTTAGACTGTTCTGTTCCTGGGTTGTTGAAGATTATTCAGAGTGATAACAAT Gene GeneID:789410|XRCC2:NM_001102354:766_cdna Constitutive 1 NULL GeneID:789410 4 GENE XRCC2 MGC160004 X-ray repair complementing defective repair in Chinese hamster cells 2 EMBV3_31039 GGATGAGCTGGACCAGACTCTGGAGGAGTTCAGATGTTTGTCTTCTTCCCAGAGGAGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04501 TACTACTTGCTGCGCTCCCCGTTCTACGACCGCTTCTCTGAGGCTAAGATCCTGTTTCTA Gene GeneID:510447|PEX16:NM_001075449:54_cdna Constitutive 1 NULL GeneID:510447 15 GENE PEX16 MGC137296 peroxisomal biogenesis factor 16 EMBV3_17320 AAGGAGATATGTGGATCTGGGGAAGGAAATGTTAGGTGGCGGAGGTTCCCTTCTCCCTTT Gene BVT0102_088655 + 0 NULL GK000015.2:28351208-28353685 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063926 1 XLOC_038652 NonCoding TCONS_00063926 XLOC_038652 NonCoding NonCoding - 15:28351856-28352433 - TSS47669 577 1 0 0 0 0 0 0 0 0 0 0 0 3.9673793333632e-06 0 0 0 0 0 0 0 0 0 0 0.000167190218969925 1.58995696702334e-05 0.00087164590136906 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.00885210282698701 0.931150820935548 0.000199057111297057 0.996763727255556 ATTGGAAAGCACCACTGCAGGGCTTCCCTTAGTCACTAGCTCAGCAAGTTGTCTGTGAAGTGTTCTAAACCTGGGACTGCCACCCATGGCTTGACAGAAGGGCCAAATTAGTGGGCAAATGTGGGGACAGGGACAGGTGACTGGGCCGTGGGACAAGTGTGTCCCTACTGGTGGCTGAGCTCCTTCAGAAGCATCTGCTTTCTAGTGGGCTGGGGGGCAGGGGGTCACCTTGAGGCAGGGCTTAGTACCCGCACACATACCCAAGTGGATCAGTCTGAAAATATGGGTATTGTACACAAGTCTCTTTGGAAAGGGAGAAGGGAACCTCCGCCACCTAACATTTCCTTCCCCAGATCCACATATCTCCTTCTCTCTTAGGTTCCCAGGAAAATACCTCCCTGCCCGATGGCACCCTACACTGTCCCAAGACACTCAGGTGTCCTTCCCAATCTGCAGGCCTTACTGAAGCAAAAGAAAATTCTTGTGAGATAAGTTGATAGCGACCCAACTGAGCAAGGCTCCTTCCGTCTCAGAGGAGCCCACAGATTTCAGGAAGACAGGAGAAACCTGACCACCA TCONS_00060832 . 3' 511 TCONS_00060832 . 3' 1087 EMBV3_22715 TGATTGAGTATGACCCTGAAAGACGATTAGGTGAACGCCATCTGCTACGGGGCAAAGATC Variant GeneID:525619|DKC1:NM_001105395:8_cdna 662^936 1 EMBV3_04503 GeneID:525619 X GENE DKC1 NULL dyskeratosis congenita 1, dyskerin EMBV3_23086 TTGCCATCTTGGATGAAGCAATGAAAGGAACAGTGGTCACTTACCTGGGTGGCCTTCCAG Gene GeneID:282006|PROS1:NM_174438:84_cdna Constitutive 0 NULL GeneID:282006 1 GENE PROS1 NULL protein S (alpha) EMBV3_35565 TCAGCCTCTGGGCTCCTGCCTGCTAAAATCAAAGCTGCCTTGTTGGTCTCCACCCTGAAT Gene BVV0102_047595 + 0 NULL GK000002.2:127431039-127433088 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106713 TCONS_00106711 TCONS_00106710 TCONS_00106712 1 XLOC_062875 Coding TCONS_00106713 XLOC_062875 Coding Coding CEP85 2:127432245-127468531 = TSS78485 3929 1 TCONS_00106713_3 764 14 0.892104175279041 0.0204117025746274 0.012005060656969 0.0155915197363188 0.00920461508606774 0.0111570217875693 0.00381984541457964 0.00680004378986265 0.00755082983442269 0.0116209455594357 0.0024364839690136 0.000647951342248823 0.000534206461503169 0.00157330224122541 0.0027500333116192 0.000491158662200285 0.00342891711128297 0.00295245206894669 0.00309952874743141 0.0191283645402675 0.0219263589594244 0.00915283152265802 0.00206589014044796 0.0022996825400301 0.00183353112052976 0.0228847141761237 0.0152686616162993 0.0158622401155307 0.000731084839921186 0.000702775600469824 0.00216265301248102 XM_595692.6 CEP85 PREDICTED: Bos taurus centrosomal protein 85kDa (CEP85), partial 0.0 6942 100.00 0.97938406719267 XM_005245969.1 CEP85 PREDICTED: Homo sapiens centrosomal protein 85kDa (CEP85), 0.0 4149 83.42 0.995164163909392 TCONS_00106713_3 sp|Q6P2H3|CEP85_HUMAN CEP85_HUMAN Centrosomal protein of 85 kDa; 0.0 1368 88.14 0.99869109947644 0 coding 1 1 1 1 0.214347603867128 0.266338990834099 -0.125497044370042 0.0368034673489032 AGCCGCTGTCCGTGGCAGACGTGGTCGCAGCGGTTGGTGTTTCTGAGTGAGGGGTTTTGCTGCTCGCTTTCAAGCCCACCTGGCTCAAGTAACTGTGTTCGTGGCCATGCAGGATAAATACCCAAGTGAGAGGATCTCTCATGCCACCTCACCAGGTTCCAGCGTGATTCAGAAGGGCAGTTCCCTGGGGACTGAATGGCAGACCCCAGTTATCTCAGAGGCCTTTCGGAGCCGCTTCAGTCGTTGTTCAAGTTTAGCTGACAGTGGGGACACAGCCATTGGCACATCGTGCTCGGACATCGCAGAGGATTTTTGCAGTTCAAGTAGCAGTCCTTCTTTCCAGCCCATCAAAAGCCACGTAACCATTCCAACAGCCCATGTGATACCTTCTACTTTGGGGACCTCTCCTTCCAAGCCAAATTCTGCTGCCGGATCCTCTACCAAACTTCCTTTGTCAGGGTTGGCTGAAAGTGTGGGGATGACAAGAAATGGAGACCTCAGTTCAATGAAACGTTCTCCAGGCCTTTCTAGAGATTTCATGTATCTTTGTGGTGCTGCTGGAGAAAATGGAGTTGAGCAATCCTGGTTTCCAGCAGTGGGCCATGAAAGAGAAGAAGAAGCGAGAAAGTTTGATGTTCCCAATATGGAGTCTACCCTCAATCAGTCGGCAATGCTGGAGACACTTTATTCAGATCCCCACTACCGAGTCTACTTCCACAACCCAAGAACCGACACAAACAAGGAGCTATACAAAGGGTTGCCTGAGACCAAGAAGGCACCGGGCAGCGGGGCAGTATGTGAGCGGAATGGACCACACCCTGGCAGCAGTGGGGTTCTTCCTTTGGGACTCCAGCCTGCTCCTGGGCTCTCCAAGCCTCTACCTTCTCAGGTGTGGCAGCCGAATCCTGACCCTTGGCATTCCCGCGAGCGATCTTGTGAGCTCAGCACTTGTCGGCAGCAGCTGGAGTTGATCCGTTTACAGATGGAGCAAATGCAGCTTCAGAATGGAGCCGTCTGCCACCATCCTGCTGGTTTTTCTCCTTCATTGCCCACGTTAGACCCAGCACAATGGATGAGCATCTTGAACAGTAATGAACACCTTCTGAAGGAAAAGGAGCTCCTTATTGACAAGCAGAGGAAACATATCTCTCAGCTGGAGCAGAAGGTGCGAGAGAGTGAACTGCAAGTCCACAGTGCTCTTTTAGGCCGCCCTGCCCCCTTTGGGGACGTCTGCTTGCTGAGGCTGCAGGAATTGCAGCGAGAGAACACTTTCTTACGTGCACAGTTTGCACAGAAGACAGAAGCCTTGAGCAAAGAAAAGATCGAGCTTGAAAAGAAACTCTCTGCTTCAGAAGTTGAAGTCCAGCTCATCAGAGAGTCACTCAGAGTGGCACTGCAGAAGCATTCGGAGGAAGGGAAGAAACAAGAAGAAAGGGTCAAGGGTCGTGATAAACATATTAATAATTTGAAAAAGAAATGTCAGAAGGAATCCGAGCAGAACCGGGAGAAGCAGCAGCGTATTGAGACCTTGGAGCGCTACCTGGCTGACCTGCCCACTCTGGAAGATCATCAGAAACAGAGCCAGCAGCTTAAGGATTCTGAGTTGAAGAGCACAGAGCTGCAGGAGAGAGTGACTGAGCTGGAGAGCTTGCTGGAGGAGACCCAGGCAGCCTGCAGAGAAAAGGAGGTTCAACTGGAAAGCCTGAGACAGAGGGAAGCTGACTTCTCCTCCACCCAACATAGCCTGCAAGATGAGCAGTGTGTGGAAGATGCCAGTGGAGATGGTCCAGCTCAACAAGGACGAGGTCCCCAAGTGGAAATGGAGTCTTGGCAGAAGGAATGTGATTCCCTTCGAAAGATTGTGGAGAGGCAACAGCAGAAGATTGATCAGTTGCACTCACAAGTACAGAGCCTAGAACAGGAAGTGGCTCAAGAAGAAGGAACAAGCCAGGCCCTGAAAGAGGAGGCCCAAAGGAGGGAGACAGCCCTGCAGCAGCTGCGCACAGCTGTGAAAGAGCTTTCAGTACAGAATCAGGACCTCATTGAGAAGAATCTGACGCTCCAAGAACACCTGCGACAGGCCCAATCAGGGTCCCCGTCTTCATCAGACACAGCTCAGCTGGCATTTGAGCTGCACCAGGAATTGGCCAGTTGTCTTCAAGATCTGCAGGCTGTCTGTAGCATTGTGACCCAGAGGGCCCAGGGCCACGACCCCAATCTCTCCCTGCTCCTGGGCATTCACTCTGTGCACCCAGGGACTCAACTAGATTTTCAGAAGCCAGATGTAATCAGGAGAAAACTGGAAGAGGTTCAGCAGCTACGCCGTGACATCGAGGACTTAAGGACCACCATGTCAGATAGATATGCCCAGGACATGGGAGAAAACTGTGTCACACAATGAGGAATGCTGGGGGTGGACAAGCTGTGCTCCCCCAGGGAGAATCTGGTCTGCTGAGAGCACCGTCCAGCAGGTCCTGCCCTGACAATCTCTTGCCTCCTATCTGCTGCTATTCCCGGAGAGAAGGGGTGGGAGCGGGGAGGTGTGAGCCTGCATACAGGGCCAAGGGCCGGTGAGAGAATCTTGTTTGTCCTGCCCAACTCTGGCTTTGCCTTGTTGGGTTGCATTTATCCTGTCATCCTGATTCACTCTTTTAGGGTGAGTTACTAATTAACTGCAGGTAAATCCTCACAGACTGTTACCGGTAACAAGCTGATGTCAAAGGCAAACAAACAGGCTGCTTAACTCCCTTCCGCATCCTTTGGGATGGATCCACATTCATTCCCACTCTGTACCTTGGTCGTGCTGATGCCCAAAGTTCCTTAGAAGGGCCAGGAAAGGCTGAGTACCAGTAACAGTAGCCGTTTGAGAATCCTCCGGCCCTCTGTGCCAGCCTTCCTGGGACCTGCCTGAGCTGGCTCTGGACTTTCCTAGGCCCAGGCCCACTCCTCCTTCCTCAGGGCTCTTATTCTCACTGATGCCTCAGGGTGATCTGTTCATTAGCAAAGTATTTGCTAGGATTGGGGGCCTGGGGATTATACCCAGGGCTCCTTCATCTGTGCTATCATGCCTATTTACAGGAGACCCACTTGAGCTGCCCCGTGCCCTTGGGGCCCTGGTCATGTAGTTAGCACAGCCCCTTTGTCCTTTGTTCTCAGGCTGGCCAGGTAGCCCCTTCTTGGGCTTTGAGTGCAAACTCTTCTCTATGGTTCTGGATTGATACCACAAGGCACTGTCAAGCTGCTCACCCCCTTCCCCCAAGGCTGGGGCCAGGGCCTGGCCTTTGATTTGTGCCTCTCTTGTGTTTGGGGACGGGGGTCCTTTCCCTTTCCTGTTCTGGGCTCCTTGAGAGTTCAGAGTAGCCAGTACAGGTCAGCTTCAAGGTATAGCGCTTGTGTTTTTAGTTGTTTCTCTGGGGCCTTTGGAGCTCTGCTTTCTGGTTTCTCTTGCCTCTTTGTTGAGAGAGCATCTTGTAGTTGTTTGTGTCTGGTCCTTGGGCCAGCTCAAGGTTTCCTCTAGATCTGGAGCCAGGGCCGTGTGAGGGGGAGTCCTGAGCAGTTCAGGAGTCCAGAGCCAGCCACTGGGAGGTGGTTGCTAAGCTTTGGGCTAGCAGGGCAGCATCCCGGACCTCACTCCCAGGCCTGAATGAGACTCCTTCTTAAGTGTTTTTACAAGTTGGTGTTTTATTTATGGAGTGACTTAACCCTCCATTCAGAGCATCCCCACCCAGCTGTCCCCTCAGCCTCTGGGCTCCTGCCTGCTAAAATCAAAGCTGCCTTGTTGGTCTCCACCCTGAATTGGGAGCCCAGCCACCATGCTCACGGGTATTTTTCCTCATAAAGTTTATAAGCAGTTATTTATATGAATCCTTGTTATGTCAACTGGTTTGTATTGCCTATTTTGTTTACAAAATAAAAATTTAACAGACGAC EMBV3_42321 TGACTAGAGAACTAACGTTGGGGTAACAGGGATGGGGTCAAAGAAAAACTGTCCTTTTGG Gene GeneID:531241|ADAM23:NM_001083458:35_cdna Constitutive 2 NULL GeneID:531241 2 GENE ADAM23 MGC139293 ADAM metallopeptidase domain 23 EMBV3_06500 GATGCAAACACCATCAACCATTATTTCTGTGACATCCTCCCTCTGCTCCAGCTCTCCTGC Gene GeneID:782297|LOC782297:XM_002699168:59_cdna Constitutive 0 NULL GeneID:782297 29 GENE LOC782297 NULL similar to olfactory receptor MOR167-2 EMBV3_14178 GGCATCTGAATCACACAGGTCAGTTGATCTCTATAAAGCAAGCCAATATGAGTAAGTCGC Gene BVT0102_187264 + 0 NULL GK000023.2:19384107-19388343 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27504 AACCCCTGCGCCACGACCAACGCATCATCAGTCGGGTCCTGTGTCACCAATCCCTGCACC Gene GeneID:618455|KRT33A:NM_001083524:225_cdna Constitutive 0 NULL GeneID:618455 19 GENE KRT33A KRT33B MGC151730 keratin 33A EMBV3_30752 GCAGAAGCATATCTCGGTTTGATCAGGAGCAGTTTGAAAAGCCAAGGCCTAGATCAGGGA Gene GeneID:616477|CHCHD3:NM_001035475:24_cdna Constitutive 1 NULL GeneID:616477 4 GENE CHCHD3 MGC127388 coiled-coil-helix-coiled-coil-helix domain containing 3 EMBV3_31633 TTATTCCTAGAGCTCCAAGGCCTAAGCCTGCAACCGTCGCTGAAGAGGATAACGGAGGAA Gene GeneID:280987|AGRP:NM_173983:20_cdna Constitutive 0 NULL GeneID:280987 18 GENE AGRP NULL agouti related protein homolog (mouse) EMBV3_42504 CCTTTTCCCCAAGAGTCTGTCAACTCATCATTTGTACACACACAATCCGGATATCAGATC Gene BVV0102_113834 + 0 NULL GK000004.2:99580190-99591041 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182509 TCONS_00182507 TCONS_00182510 TCONS_00182511 1 XLOC_110880 Coding TCONS_00182509 XLOC_110880 Coding Coding CALD1 4:99503293-99582215 j TSS136365 3988 1 TCONS_00182509_4 529 12 0.949620506582532 1.82486189625349e-18 5.09204004831223e-21 0 4.67752862999332e-17 1.85849589096867e-10 9.28849958837582e-10 1.57007919874658e-08 1.10241927273388e-05 3.75783612702067e-05 7.44054113577648e-07 2.88365601657677e-05 0.000130105404640271 9.82550715210173e-06 6.18968185274185e-05 4.01911825326692e-06 0.0322473923735479 0.0144100021750482 0.0257578695777854 1.55085460562291e-18 1.88486989490772e-12 7.03988488819938e-13 0.00742861414708733 0.00473309428523803 0.0107081464755452 8.86959555537831e-06 4.68554624004e-05 1.36453551735787e-09 0.000136370340770257 0.000409303119602474 0.000177620640810327 XM_005205760.1 CALD1 PREDICTED: Bos taurus caldesmon 1 (CALD1), transcript variant X9, 0.0 7182 99.92 0.99974924774323 NM_033140.3 CALD1 Homo sapiens caldesmon 1 (CALD1), transcript variant 5, mRNA. 0.0 4259 83.68 0.998996990972919 TCONS_00182509_4 sp|Q05682|CALD1_HUMAN CALD1_HUMAN Caldesmon; 3e-177 524 92.74 0.593572778827977 1 coding 0 0 0 0 -0.142397242783027 0.286396364346915 -0.142397242783027 0.286396364346915 CATCCCGCACACTGCATTTCAGCCCAGATAACATGGCACTTCCGCGGGCCGGGTCCACGCCCTGACCGCCGGAGGGTCTCAGCACCTCTGCGCCCGCCCGCCGCCCTTCCAGCTGCAGACATGCTCGCGGGATCCGGATCTCAGGGAAGACGCAGCCTGGCCGCGCTCTCCCAAATCGCCTACCAGCGGAATGACGATGACGAGGAAGAGGCCGCCCGGGAACGGCGCCGCCGCGCCCGACAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGAAGCCTTGGGGCAGGTGACCGACCAGGTGGAGGTCAACACCCAGAACAGTGTGCCTGACGAGGAGGTCAAGACAACCACGACCAACACTCAGGCGGAGGGCGATGATGAGGCTGCTCTCCTGGAGCGACTGGCTCGGCGGGAGGAAAGACGCCAAAAGCGCCTCCAGGAAGCCCTGGAGCGACAGAAGGAGTTTGACCCAACAATAACAGATGCAAGTTTGTCGCTCTCCAGCAGAAGAATGCAAAACGACACAACAGACAATGAAACGGCGGAGAAGGAAGGAAGAAGTGAAAGTCGCCAGGAAAGGCAGGAGCTGGAGGAAACGGAAATAGTCACCAAGTCACACCAGAAGAATGATTGGATGGAAGCGGAAGAGAAAAAGAAAGAGGAGAAAGAAAAGGAGGAAGAAGAAGAAGAGAAGCCAAAGCCAGGGAGCATTGAAGAAAATCAGCTCAAAGATGAGAAGACTAAAAAGGACAAAGAAAGCAAAGACGTTAAGAGGTTCTTGGATGCAAAGAAGGGATTTACAGAAGTGAAGTCTCAGAATGGAGAATTCATGACCCACAAACTTAAACACGCCGAGAATACTTTCAGCCGCGCTGGAGGGAGGGTCAGCGAGGCCAAGGAGGCTGAAGGCACTTCCCAGGTGGAAGCCGGCAAACGGCTGGAGGAGCTGCGCCGCCGCCGTGGGGAGACGGAGAGTGAGGAGTTCGAGAAACTCAAGCAGAAGCAGCAGGAGGCGGCCTTGGAGCTGGAGGAGCTGAAGAAGAAGAGGGAGGAGCGAAGGAAAGTCCTGGAGGAGGAGGAGCAGCGGAAGAAGCAGGAAGAAGCAGAGCGAAAAGTGAGAGAGGAGGAAGAGAAGAGGAGGCTAAAGGAAGAGATTGAAAGGCGAAGGGCAGAAGCTGCTGAGAAACGCCAGAAGATGCCGGAAGATGGTTTATCAGAGGACAAGAAGCCCTTCAAATGTTTCACTCCTAAAGGTTCATCTCTCAAGATAGAAGAGCGAGCAGAATTTTTGAATAAGTCTGTGCAGAAAAGTGGTGTCAAATCAACTCATCAAGCAGCAGTAGTCTCCAAGATTGACAGCAGACTGGAGCAATACACCAGTGCAATTGAGGGAACAAAAGCTGCAAAACCTACAAAGCCAGCAGCCTCGGACCTTCCTGTTCCTGCCGAAGGTGTCCGCAACATCAAGAGCATGTGGGAGAAAGGCAATGTGTTCTCATCCCCCACTGCTTCGGGCACACCAAACAAGGAAACCGCCGGCTTGAAGGTGGGGGTCTCCAGCCGCATCAACGAATGGCTAACCAAAACGCCCGAGGGAAGCAAGTCGCCTGCTCCCAAGCCTTCTGATTTGAGGCCAGGAGATGTATCTGGCAAGAGGAACCTCTGGGAAAAGCAATCTGTGGACAAGGTCACTTCCCCCACTAAGGTTTGAGACAGTTCAAGAAAGAACCCAAAGTAGCCGCTCAAGATGCTGGACCAGCTCAGTTGAAGAGGGCTAATTTGCTCTGTTTTATATTTATGTTGATTTACTAAATTGGGTTCATTTCCTTTTGTTTTGTTTTTCATTATCCCAGTAAACCCATGTATATTATCACTATATTTAATAATCACAGTCTAGAAATGTTCATGGTAAAAGTACTGCCTTTGCACAGGAGCCTGTTTCTAAAGAAACCCATGCTGTGAAATAGAGACTTTTCTACTGATCATCCTAACTCTGTGTCTGAACAGTGATACCAGCCACATTGAAAGTCAACAAAAGGAGATCCGAGTTGGAAATTGCCTGAGGAATGTGCAGTATCCAGAAAAATGAAACCTAGTGGTTTAAAAACAAAACAGAAGTCATGTCATTTCTGCACTTTAGAATAAAGCATGGAAGAAATTATCTTATAGGCAATTGTAACACTTTGTGAAAGTAACCCACTTCAGATTTGAGATACTGCAATGTTTCTCTTCAAAATAGAAAGATGTACGGTTAAGGTATTACTTTTTTCATGTTGATGAATATCTAAATTGGGTTATGATGTTAGCTGACAGTGGTACTGATTTCTTTAGGTTGGTTGCTTTGTGGATTTCTTTGGTAGTGATAGTAAACCACATTTTAGATGACCCTGATCATGTATGTATGTGCATACATGTACACAAACACACTAATGGTAGAAAGCTTTTTTATGTGCTAGGCTATTATATTTAGCAGTATGTCCCTGTAACTAGCCAATATCACTGCTTTTTAAAAACTAAAAATCACAATATTATATTAATATTTCATATTTGCCAATAGCAACATGGCAGAATAGGTATCGATATGTTTCCAATGCTGGATAACCTATAAGAAAGAGAGATTCAAAGTGTCAAAATGCATTGACATTTTCTATAAAACATAGTACTTAGTTTATAATTAAGAGCAATCTTGAAGTCCAGTGTGAATTGTACCAAATCTACCAAACTTAAAGCTTGCTCAGAACTTCACTCTTAAGAATCAAGTTCACAATAGATTGGCTTAAATGCTATCTGAGTTCTCTTCCTTCTCTGAAAATTAAAGACAAGAATCTTAGTGACAAAATTGTACAGCTTAGAATTCCATAAATAAGTGTACTAAGACCAACTTTGACTAATCTCTGGAAGCAGAAAAGTAAGCAAAAGCCACTATTTAGGAGTCATGACCTACTTACATCTTTAACATCTTTTTAGTTAAACTTTTCTACCTTTATTAGTCATTGGTACTTGCCATAAGTTGATAATGTGCTGAGCTTTCAAAAAATATATATGTAATTTTCATTAGTTTTACCTTTTTCCCCAAGAGTCTGTCAACTCATCATTTGTACACACACAATCCGGATATCAGATCTTCTTTTAGCTCATATGCATTCATCTATTCTTCACAATAAATAAGAGTACTCCAGTGTCTTGGCAATATGTTCTAGCATAGAGCTATACGTATAGTGTAGTTCTATAAACCTATACCTCATGACTTACCAAAGTTATCTTAGTATCAATTCCTACCATAATGAGGGAGCCTCCCAAATGACCCTTTTCTAATCCACAATGTTCCCTGGGGGAGCTTGCCAGGGTAGGGCTGGCATGAGGAGTGACTAGCGCCTTCCAGAGGCTCTTTTCCTCGAAAATCAATATAGAGTTGTTGACTCCTCTAGCTTTTAGCACACCTAGGCCAAAGAAAGTAAAGCCAGCAATATTGCACAAGTCACCCACCCATGACAGAGTAGACATGAGTCTATGATAAGATGAACTAGAATTCACATGCAGTGCCTGAGTTAGCACTGACTCCCACGACTGGAGTGAAATGGATCAAAGTTTGAATTATGGCCTATATCGAGATAAAGTTTCTTTGTTGTACTTTTGAATAAGAGCTTCTCCTGATCACTGTTATATATTTTTTTCTAGAAAGTCTAAAATTAAGAAGAGAATATATCGATTGATCCTGACTTTTATTCCAGTATTTGGATGGAATAACTTTTAGGGTAGATTTTTGTTTGGTTTGAATTTAATTTTTTGAAAAAGAAACTCCTCGTTTACTTGTTTCATTACAATTCTCTTTGTTATCTTTTTAAGAGATAAACCTGCAAGGTGACTAGCATGTTCTGTGAATCTGCCATTCCTGAAAATTTTATAAACACAATATTTTTCACTGATAATTGATCGCTGCAATAAATATATATTGTGAAAATGCATCCACAATAAATGGAATTCCTCCA EMBV3_15236 TAATTATGTTCTGCATTGGTGGCGCTATCCTGTTGGCCATGCTCGTTCTGATGGCCGTTG Gene GeneID:100295742|LOC100295742:XM_002698554:57_cdna Constitutive 0 NULL GeneID:100295742 26 GENE LOC100295742 NULL hypothetical protein LOC100295742 EMBV3_28912 CCTGCAGAAATTCTCTCACAAATAACCTGCAATAACTTGAAATGCATACCCTTTTGAACA Gene GeneID:782101|COPS2:XM_002691476:354_cdna Constitutive 1 NULL GeneID:782101 11 GENE COPS2 NULL COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) EMBV3_37315 CTCATATTTATCACCTTCGCTGCAGGGCCTTTCGGCCCCCACTTCTTTTGGTAGCTGCAT Gene BVV0102_167952 + 0 NULL GK000007.2:4266114-4267726 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36044 AAAGGCGTGTGTGCTAGGTTAGTCTGTGGGTCCTTTGGCACTGGCCTTGTTATGGCAGTT Gene GeneID:508986|LOC508986:XM_002685900:131_cdna Constitutive 0 NULL GeneID:508986 3 GENE LOC508986 NULL similar to Olfactory receptor 10J5 EMBV3_39740 AGGCTCTGTTGCAGGGCTGGCTTAGAGCAGGTTCAGGAGCCCCCCTTCTGTACTATGTCA Gene GeneID:506740|ESPL1:XM_002687240:114_cdna Constitutive 0 NULL GeneID:506740 5 GENE ESPL1 MGC137029 extra spindle pole bodies homolog 1 (S. cerevisiae) EMBV3_11935 GTGAATCCACAGCCTTCCAACCTGCCCTGGGACCCCTTACACTATGGAGTTGACAAAGTA Gene GeneID:281445|RCN1:NM_001103221:5_cdna Constitutive 1 NULL GeneID:281445 15 GENE RCN1 MGC140230 reticulocalbin 1, EF-hand calcium binding domain EMBV3_21452 AACCACTGCTACTGCTAAGTCACTTCAGTCAAATGCTTATCCATATGGTTTTCTGACGGC Gene GeneID:518825|TCHHL1:XM_002686073:330_cdna UTR3_Alt 1 NULL GeneID:518825 3 GENE TCHHL1 NULL trichohyalin-like 1 EMBV3_27010 CATATCATAGCTCGCTGGCCTTCACCAGCCTCAACTGCGTGGCTGATCCCATCCTCTACT Gene GeneID:512876|GPR4:NM_001075583:199_cdna Constitutive 0 NULL GeneID:512876 18 GENE GPR4 MGC138964 G protein-coupled receptor 4 EMBV3_18300 GAGGGAATCCAGTCATTCCATTGTTGCACTCTAGGGGGATGGTTGGTGGAGGAGTCGTAA Gene GeneID:513767|LOC513767:NM_001083681:23_cdna UTR3_Alt 2 NULL GeneID:513767 19 GENE LOC513767 MGC157333 phosphatidylcholine transfer protein-like EMBV3_22203 CTGCCGAGCTACACCTGGTTCACTGGAACACCAAATAAGAAGGCCCCGGGGCGGTGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22278 ATAACTTCTACTTACTCTAAGGTATTCAAGGTGTGAAGTTTTTCAACATGAGTGGCCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17629 AACTGACCAGAATAGGCCTTCACCGGCCCCCACCCTTCAAAGACTCTGCTAAGAACCTGA Gene GeneID:100336471|LOC100336471:XM_002687995:120_cdna Constitutive 0 NULL GeneID:100336471 5 GENE LOC100336471 NULL hypothetical protein LOC100336471 EMBV3_23038 TCCTTAAAATGTGAGTGACCTCAGCTCCACCAGTGTGACCACTATGACTCAGAACTACTG Gene GeneID:281417|PON2:NM_001013588:6_cdna Constitutive 0 NULL GeneID:281417 4 GENE PON2 NULL paraoxonase 2 EMBV3_03789 CTTTAGATCCCGCTCCCATTTTCATTCCCGCGCCTAGCCTCCAAGCAGCGACTTCGACCT Gene GeneID:617781|LOC617781:XM_002694599:702_cdna Constitutive 0 NULL GeneID:617781 17 GENE LOC617781 NULL similar to Uncharacterized protein C12orf34 EMBV3_25748 TCTCCATTCCCTGGCGTTGCAAGTGTTTTCCAAATGCCCTTAGCTGGTGTCTTGTCCTGT Gene GeneID:516989|RALYL:NM_001077932:48_cdna UTR3_Alt 2 NULL GeneID:516989 14 GENE RALYL MGC133552 MGC143116 RALY RNA binding protein-like EMBV3_40990 CCACCTAAAACTCTTCAACAGGATGTTTGTTTCCCATGCTGATTCTGGAGGGCTTAGTTC Gene GeneID:781723|LOC781723:XR_083999:47_cdna Constitutive 0 NULL GeneID:781723 20 PSEUDO LOC781723 NULL similar to erythropoietin 4 immediate early response EMBV3_09539 ACGAGGAGAGGGCAGACACCTACATCCCAGTTCACTACAGGCACCTGCGGCGATGCGGCC Variant GeneID:532761|OVOL2:XM_002692131:96_cdna 101^321 1 EMBV3_43106 GeneID:532761 13 GENE OVOL2 NULL ovo-like 2 (Drosophila) EMBV3_10988 AAGCCCACAGGGACAAAGAAAGCAGAAGCAAATCTGGCAGGCTTGAGGTAGCACTAAGAT Gene BVT0102_119963 + 0 NULL GK000012.2:19276926-19298707 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038573 1 XLOC_022397 NonCoding TCONS_00038573 XLOC_022397 NonCoding NonCoding - 12:19280993-19283249 - TSS28074 2256 3 TCONS_00038573_2 89 0.333776595744681 1 0 7.53861281246717e-05 0 0.000196893532454132 4.41710438077356e-05 2.91795994396252e-05 1.10990528320682e-05 0.000190211221077506 0 4.54661476731645e-05 0 9.56364546526211e-05 0 0 0 0 0 0 0 1.27144076183612e-05 0.000372960690283978 8.07374457634492e-06 0 0 7.43112302909883e-06 0.000202694782920569 4.05988287421584e-05 5.19427546883793e-06 8.51523032875194e-06 6.45559694553196e-06 0 XM_003581785.2 RIPPLY3 PREDICTED: Bos taurus ripply transcriptional repressor 3 (RIPPLY3), 5e-72 277 86.19 0.104166666666667 0 noncoding 0 0 0 0 0.0451162889703344 0.716380026976635 -0.00648706344979394 0.898066544359428 TTGCTGCGCAGGCTTCTCTCCAGTTGTGGTGAGCAGGGGTTACTCTCTGGTTGCGGTGCACGGGCTTCTCATTGCAGTGGCTTCTCTAGTTATGGATCGTGGGCTCTAGAGCACAGGCTCAACAGTTGTGGCTTCGTTGCTCCGAGACAGGAGGGATCTTCCCAGGCCAGGGATCGAACCCATGTCTCCTGCACTGACAGGTGGATTCTTTACCAATGAGTCGTCAGGGGAGCCCCTCTGACTCAGATTCTGAAGATGTTTCTGCCTCCCCTCTTGGACAGAAGCGATCCTTCAGTGAAAGTTACAAACCATGGGAGTTGGGTTTTGGTTTGGTTCTGCTGAGTTTTAAGGTTGGGGCTGTCCATCCTCAAGGATCTCTGCACTCACCTCCTCCTGTGGGGGCTTGGGGCAGCTGTGTCCTCTAAAGTGGGCCAGGCCCCCCTTCTGAGCACATGGGTGAGCCGGGATCTTGCCTTCCTTCTCATCCTCCATTACCCGCAGCGTCCCAGCTGCAACCTCAGGTCATGCGGTGCAGTTACTTCTATAAAGACTTGTCTTGCTTCAGAGCCCACCTGATGCAACTCAAGACCAGTGGGGCCCCACACAGAAGCCCCCGCCCCCGCAGACAGACAAATGCAAGTCAGACAGCAGGAATGATGAGACTGTTCAGGCCACGCCTCTCGTGGCAGAGGCTGAGCCAAGATGGGAGAGTCCCTGAGTGAGTGGGAGGGAGACCCCCTGGAGGAGGGCATGGCAACCCATTCCAGTGCTCTTGCCTGGAGAATCCCAAGGACAGAGGAGCCTGGTGGGCTACAGTTCAGAGGGTTGCAAAGAGTTGGACATGACTGAAGCAACTTAGCACATCGTACACTTTGAGCAGGGCTTCTGTGTGTAAAAGGACAACGTCATGACCCAAGCAGAAAAAGATCAAAATTCTGTGGGCCTAATCCTTTGGCCACCTGATGAGAAGAGCAAACTCATTTGAAAAGTCCGAGGCTGGGAAAGATTAAAGGCAGGAGAAGAAGGGGGTGACAGAGGATGAGATGGTTAGTTAACATCACCGACTCAATGGACACGAGTTTGCACAAACTCTGGGAGACAGTGAAGGACAGGGAAGCCTGGCGTGCTGCAGTCCATGGGGTTGCAAAGAGTCGGATATGACTTAGTGACTTAACAACAACTATCCTGCCTGGGGAGAAATTCTATTAAACCAGCATTCCAAACTCTTCAAGGAAGTCATGTGCAGAGGTGCCCCTTTCTACCACTTTGAAGACAAGATTGAGTTCTCTGGGTCGATCAGGTGATCCCCAGGAATCAGGAGCTCTGGGCGGTGGAGCGGAGCAGCTGGCTGGCTGTCAGGTTCTGTCACAGCCACGGGTCACGAGGTTTTTACACAAGCTCCGGGGTGGACCCATCACACACCCTTCCTTCCCCTCAGTCAGTGTTGGTGACTCAGGGGATTTCAGAAAGGAGCTCATGGGACATGCAACCAGCAGGTTCATCCCGAGGCGCTTCTCAGCGTTTTCGAGACAGAACTTTAGGAGCTGGATCGACACCTGAGTAAGAAGCCTGGCATTTGCTCCCCCGGCTCTGCCTGCTACACTCTGAGCTCAGGCCAGACTATGACGAATGTACTACCTGGGGGCGCTGCTTCAGGAGAGACAGAGAAAGCAAGCAAGCTGTTGAGACTTGTGGTTCCACGCTGTGAAATGCATAGACACGTGACTCTACCGTCTCCCCATACCTGACAGGAGGGAAAATAAAGGGATTTTTCTTTTAAACGCCAAAGCCCACAGGGACAAAGAAAGCAGAAGCAAATCTGGCAGGCTTGAGGTAGCACTAAGATTACAGAAGATAGAAAGTGATTCACAGACCAAAGAAAGTGGAAATATAAGTTGCTGGGGGTTGGGATGTATGTACATATGTGTATGTGTGTGTTCAGTAGAAGGACTCACTCTGTACTGCCCTGGTCTAAGTGTTGAAGGTGTATTAACCTACATAATCCCCCAACAATGTGAGAGTTTCCAGCCTGATTTGGGGGATGAGGCACAGAGAGGTTAAACAACTTGTCCCAGGTCACACAGCAGAAGTTGAACCTCTGCAGAAGTGTGGCCCAGAAACCTTGGTCTACACAGCCTCACACAAGCAAGTCCTTCTGACACAAACCCCAGGACATCTCAGGACTTGGGCTCTCATGAAGCAACAAAGGAAACATAATTTGTGGAAAGTCTGTATGGAGAGACATATCCTCAGCCT TCONS_00034740 . 3' 4069 TCONS_00034740 . 3' 6324 EMBV3_05318 CTCCATCGCAAAATGCTTACAGTTCAGAAGGCATGAAGCATCACCAAGGATTTCCCCGCG Gene BVV0102_131499 + 0 NULL GK000028.2:8408742-8423714 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22785 ACATTCGGTACATTCAGCAGGGACTTGTGAAACAGCAAGATGTTGACCAAATGTTTTGGG Gene GeneID:533284|RAB3IP:NM_001046347:37_cdna Constitutive 1 NULL GeneID:533284 5 GENE RAB3IP MGC137223 RAB3A interacting protein (rabin3) EMBV3_13379 ATGGCTCTGGGAAGAGATTCATCAAAGCCTTCAGGTGGCCAGTGTTGGTCACGGTGTGAG Gene GeneID:520669|ESYT1:NM_001077943:1049_cdna Constitutive 0 NULL GeneID:520669 5 GENE ESYT1 FAM62A MGC139353 extended synaptotagmin-like protein 1 EMBV3_25226 GGGCTAAATTTATTGATTGGTTTGAAAGCCAGTCTTGGAGCAGAACACATTCCAGTATTA Gene GeneID:520468|TMEM136:NM_001075806:131_cdna Constitutive 1 NULL GeneID:520468 15 GENE TMEM136 MGC139257 transmembrane protein 136 EMBV3_20611 TGTGTGTTAACGGTCCATGCATCCTACTTATCCACATTGCCTGACTTGGTACCCCAGCTG Gene GeneID:538915|WDR43:XM_002691448:273_cdna UTR3_Alt 2 NULL GeneID:538915 11 GENE WDR43 NULL WD repeat domain 43 EMBV3_09967 GACCTTGAGTATGTTTGTACTTAGTCTTCACTCCTGACCTGGGACTGGCAACTGATCTGG Gene GeneID:281942|CALCOCO2:NM_174400:29_cdna Constitutive 2 NULL GeneID:281942 19 GENE CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 EMBV3_18534 AATGCAACTAGAGAGTAGTCCTTGGCTCACTGCAACTAGAGAAAGCCCGCATGGCAGCAA Gene BVV0102_085606 + 0 NULL GK000007.2:44951964-44968575 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220767 1 XLOC_134084 NonCoding TCONS_00220767 XLOC_134084 NonCoding NonCoding - 7:44966536-44967053 - TSS164765 517 0.945841392649903 1 0 0.000157899641795327 0 0 0 0 0 0.000214318705113011 1.14404651880084e-05 4.57841909899288e-05 0 0 0 0 0 0 0 0 0 2.77406105244135e-05 0.000111279502595445 0 0 0 0 0.000380150016930897 0 1.13329827295576e-05 0 0 0 XM_005208942.1 EBI3 PREDICTED: Bos taurus Epstein-Barr virus induced 3 (EBI3), 8e-56 221 88.51 0.334622823984526 NM_021731.2 MFSD12 Homo sapiens major facilitator superfamily domain containing 12 (MFSD12), transcript variant 1, mRNA. 5e-14 82.4 76.23 0.2321083172147 0 noncoding 0 0 0 0 -0.671776224705867 0.0893818796950329 0.0032228250445762 0.949616263375325 GCCCATATGCCCTAGAGCCCGTGCTCCACAAGAGAAGCAACTGCAGTGAGAAGCCCCCACAATGCAACTAGAGAGTAGTCCTTGGCTCACTGCAACTAGAGAAAGCCCGCATGGCAGCAAAGACCCAGCACAGCCATAAATAAATAAATAATAAAAGCTGAGGTGTCAAAAATAAGTAAAATTTTTAAATTGATGTGAAATTCACGTGACATAAGATCAGCCATCGTAAATTATACCATCCACTGGCTTTTGGAACATTTAGAGTTGTGCAACCACTTAATTCTAGAACATGTCCCCCAAAGAAACCCTGTTTCCTTCAGCTATTATTCCCCTAACCCCCTAAATCCACAGTCCCTGACAACCAGGAACCCACTCTCTGTGTCTGTGGATCGAACTGTTCTGGACATTTCCCATCAGTGGAATCACACCCTGTGTGTCTTTCTGTGTCTGCTTCTCTCACTGAGCATCGTGTTCTCAGGGTCTGTCCACGTGGTAGCAAGTGTCAGGGCTTCACCCC TCONS_00213113 . 3' 1059 TCONS_00213113 . 3' 1575 EMBV3_29656 TCCTCGTGCCCTGCTTTTGGCTTTCCCACCAGCTTCTCTGAGGCTGAGGGGTTTAGCAAG Gene GeneID:540142|FOXS1:NM_001099716:1246_cdna Constitutive 0 NULL GeneID:540142 13 GENE FOXS1 FKHL18 forkhead box S1 EMBV3_32942 CTGCGCATGGTCCTACATATTGTGGAACGCAAGGAAGAGTGATAGCCTGGAGATAGAAAT Gene BVV0102_294451 + 1 EMBV3_35209 GK000009.2:101510192-101942118 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236484 TCONS_00236482 TCONS_00236483 1 XLOC_144483 NonCoding TCONS_00236483 XLOC_144483 NonCoding NonCoding - 9:101797036-101805128 - TSS177021 1432 1 TCONS_00236483_3 101 0.337290502793296 4 0.823507601038191 1.9002132897945e-05 5.44339399898712e-12 9.69343417412179e-05 8.40813037361975e-05 0 1.20419863117229e-12 0.000117656530520462 0 7.89954394760158e-12 8.31496740475004e-12 8.95523202627585e-13 0 6.70796110314038e-12 1.88952390735857e-12 0 0 0 0 2.94881010604331e-05 2.72773881855617e-05 1.12817232612588e-12 0 0 0 6.96241030930597e-05 0.000290339071092176 0.000102892102970125 1.47408584153717e-11 1.06960068601642e-11 0 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 3e-28 131 72.20 0.125 0 noncoding GGTGTTGGGTAGCTCCTCCCGGCCGACACCCCTGACCTCGGACGTGGGGTAGCTCCTCTCGGCCATGCTTCTGCGCATGGTCCTACATATTGTGGAACGCAAGGAAGAGTGATAGCCTGGAAATAGAAATTGAGGTGGATAAAAATGTCAGCCTCTCCTTCTGAACTTGATGGAGTCTCTGTGTCCATTCGTGAGAGTGGGAAGAAGGATGTCCAAGATGCTGAGAGAAGTCAGCTCAAGTCTGAACGGATCGGGCTTCCTCGCAAGGAATCTTCCTGATTCAGAGATCAAACCTGGGCCTCCTGCATTGCAGGCAGATGCTTTACCATCTGAGCCACCAGGAAAGCCGCTCTTCTGCAGAAGAACTTCCCAACCCAGGAATCAAACCAAGGTCTCCAGCATTGCAGGCAGATTCTCTACCAGCTGTGCTACCTGGGAATCCCCAACCAATCAGCTAAGCCTACACATCAACTAAGTGCTTCTCTGCTCAGCACAACCACTTGTCCAGCTCCAAGACTTCCCTCTGCTCCATGAAGAGAGAGTAACCCAGTTTTAACCAATCAGCCCATGCCCAGCGTAACTTCCTTGTTCTTGCTCCCCTTGGTCTATAAAAATCTCTCTTTGTACAGCTCTTTCATGGCAACTTTCTATCTGCTAGACTAGGTGCTGCCCAGTTTATTAATCACTGGATAAAAGCCTACTAGATCAGTAACTTGCGGAAATTTTTCTTCTAACACAAGAGGACGCAGCATCAAACAACACCAAGAATCTCCAGTGTTTTCTGGGACTTTTCAGAAGTGGGGCTGACACTTTCTCAAGTGTAACATGATGCTTTTTACCCTCTGTAGGACTAAAACAAAAAGCAAAAAAACCCCCAGAAAACCTTAACCTCCACCCCCACCCCGGGCAAAAAAAAAAAATACAAAAGCCCAAAACAAAACAATCTACAAGAAAGCCTGAAAGCCTCTGATTCCTGGAGAGTTTCTGAGATGTCTTCAGGTATTACTGCTCTTCAATCAGCATCACTTTTAATCTTTGAGGCTTTAACTGCTCTCACACCCCAAGCACTTTTAAACTAAGACCTGAGGTGTGAATGGCACCCTGTGGTCAGGGATCAGGGCTCTTGACTTCCTAGGTCTTAGCTTTTCCACAGAACCACATTAGTGATCTCACTAACAGCACAGTGGTGTCAGTTATTTTGAAATAAGAAATCATACTATTCCAGCATGTCTAGTGAATCATTAAAATATCAACTTTGTTGATTCGGAATTACATGCATAACTACATTTCAACCTTACTCCTTGTCCTAAATTATACATTTTTTTTCCTTCTTAACTCTGATTGCCATCTTTAAGTATTTCGTTTTCAACATAAATTAATATATATCCTGGTTTCCCAGGTGACTCTAGACGTAAAGAACCCGCCTGCCAAT TCONS_00238195 r 3' 136991 TCONS_00238195 r 3' 145082 EMBV3_09014 TGCGGGCCACAGGGCAAAATCGCCATAGGCCAAGGTGCATATAGAAAACAAAAGGAGCAT Gene GeneID:523683|CUX1:XM_002698198:743_cdna Constitutive 0 NULL GeneID:523683 25 GENE CUX1 CUTL1 cut-like homeobox 1 EMBV3_04121 GACTCGAAACCGAAGAAACACTGCATACAAGTGGAAGGAAACGCTGTACTCGGTGATGCC Gene GeneID:513700|ITIH4:NM_001015590:154_cdna Constitutive 0 NULL GeneID:513700 22 GENE ITIH4 NULL inter-alpha (globulin) inhibitor H4 (plasma Kallikrein-sensitive glycoprotein) EMBV3_19212 CCACATGGATGGGGACAAGGGTCCCCGCAGGATGAATCTGAGGATACAGACAGTGACGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34859 ATAAATGAGCGAGGCTTTCCTTTGAGGCCTGGCCCACTGCAGGCGAAGAACTGCCGAGGA Gene BVV0102_063559 + 1 EMBV3_09537 GK000011.2:60296936-60336074 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025065 1 XLOC_014661 NonCoding TCONS_00025065 XLOC_014661 NonCoding NonCoding - 11:60317246-60318296 - TSS18276 1050 2 TCONS_00025065_1 52 1 0 2.33424708254617e-11 0 1.76266689988516e-05 0 0.000235079127229261 0 7.91261324106512e-11 0 0 0 0 3.40541383270375e-06 2.73265187193709e-06 0 0.000132919573899518 0 0 7.16883590788722e-05 0 6.84898811397277e-06 0 0 0 0 0 0 0.00101558641792311 0 1.38702969659086e-05 0 XR_227070.1 LOC101902014 PREDICTED: Bos taurus uncharacterized LOC101902014 (LOC101902014), 2e-117 426 100.00 0.223809523809524 0 noncoding 0 0 0 0 0.0395517144119811 0.722213145821616 -0.000432797147407127 0.994291508999415 GGGGTGCGGGGGAGGTCGGCAGAGTTAAAGTTTTTCCTGAAAATGAAAGGCTCCCCCTCTCCCATCCACCCGCCTCTTCCCGTCATTCTGGAGGCGCTTAGAGGCCGCCGCGGGGGAAGGCCGTTTCTCTGGGTGACGATTTACAAGAACGCTGCCAGCGTCAACAACGCTGGCCGACTATTGTGTGTTACTGCTGCCTAGAAAGGTGGACGGGGCACAGCGCAGCGTGGGACGTGAAGGCGAGGTACACACTGATTGGCCCGCGGCTGCCCAGGCCGCTGCTGGGGGCGGGGCGGCGTGCAGGCGGGGTGGCGCGCGTGCGCAAAGGCTTCCCCTCGAGCCGGACAGTTTCCCGGGTGCCAATGTGGGTGTTCCAGTCGCGGAACTGGGCGGAGCGAGGGGTTTGATTTTGGCCTGGCCGCGGGAATGGGGGCCGTTAATCTTTCACACACGCACAACTAGCAGGGCGCATAAATGAGCGAGGCTTTCCTTTGAGGCCTGGCCCACTGCAGGCGAAGAACTGCCGAGGAGTGAGAGGCGAGGCCCGGGCCAAAAGATGGGATCACATGCGGGCCACTGCCTGCGTAGCGTAGGGCGGGGAAGCCCTGCGGAAAAGCCAGAGTGGAAGGACCGACAGCCCAAACACTACCGCTCCCTTTGGCTAGGTACCTAACTTTATGGTGATAAATTAGTAGCTTTGTTATAGAAGTCTAGTTTTAAGTCCCAGAGAGTGGACAAGAATCACATACTGTTTTGAGAGAGTAATACCTCCATGGGAGACCTCGAAGCCCAGTAAGGCTTCCAGATTTCCTGACCATTTGGTAAATGATGTTCAAAGGAAAAATTAAGATATGTCCATCTATGTAACTCTTCAGGCTTAAATACCTGTTTATCTTAAATTACAAAATTAAGTGAAGGAAACTTTGTAGTAGGTTATAGTGACCAATTGGCTACTATTCATTATCGTTTAAAATTTTTCTTAATTTGTAGGTATCAGAGAGCCTTTTGCTATTTTATTCTTGGAGTATTGTTGTAAATGAAAAATTTTAC TCONS_00027979 TCONS_00027980 TCONS_00027981 TCONS_00027982 TCONS_00027983 TCONS_00027984 TCONS_00027985 TCONS_00027986 TCONS_00027987 TCONS_00027988 TCONS_00027989 r 3' 34239 TCONS_00027979 TCONS_00027980 TCONS_00027981 TCONS_00027982 TCONS_00027983 TCONS_00027984 TCONS_00027985 TCONS_00027986 TCONS_00027987 TCONS_00027988 TCONS_00027989 r 3' 35288 EMBV3_33118 TGGCTCAAGGTTTGTGCGAGGTGCTGCTGGTGGTAACCAAGGAGGTGGAGGAGCAGGGCT Gene GeneID:540860|ASPDH:XM_002695130:645_cdna Constitutive 1 NULL GeneID:540860 18 GENE ASPDH JOSD2 aspartate dehydrogenase domain containing EMBV3_10211 CAGACCTTGCCCACCGAGTTTTAAGGTGGGGTAAATTAGCAGGCTTTTCTGGAAGCTCTG Gene BVV0101_063663 - 1 EMBV3_20094 GK000004.2:62683823-63052080 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00175509 TCONS_00253103 TCONS_00118459 TCONS_00118040 TCONS_00087263 TCONS_00210913 TCONS_00174805 TCONS_00087262 TCONS_00171428 TCONS_00004713 TCONS_00174806 TCONS_00232824 TCONS_00176420 TCONS_00004714 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00238380 TCONS_00174807 TCONS_00232829 14 XLOC_151107 XLOC_105290 XLOC_156044 XLOC_072622 XLOC_072206 XLOC_052424 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_001092 XLOC_142307 XLOC_106198 XLOC_145047 XLOC_142312 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_10506 TGTCAACTTGGGACGATCGCCGGGCAGAAGGCACGTTTCCTGGGAAGATCTGAACTGGCT Gene GeneID:100270792|COX6B1:NM_176675:483_cdna Constitutive 0 NULL GeneID:100270792 18 GENE COX6B1 COX6B MGC127294 cytochrome c oxidase subunit VIb polypeptide 1 EMBV3_15409 TTGCTCTACGACCTACCCATGAGTCCCTCTACACTGAACCCCAGAAGGTTATTAGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_20393 TGACCACAGCACATCCCGTCCGTCTCTGGACCTTGGTCTCCTCTTCTGTGAGACCTGGAA Gene GeneID:787995|VASN:NM_001083796:339_cdna Constitutive 0 NULL GeneID:787995 25 GENE VASN SLITL2 vasorin EMBV3_29219 TGGATCAACATGGGTTTATTGCTGAAGAGATCTGGTGGGTAGCTTTAACTGTGTCTCACC Gene GeneID:533700|DDX5:XM_002696101:171_cdna UTR3_Alt 2 NULL GeneID:533700 19 GENE DDX5 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 EMBV3_13856 CAAGCGGTTTGAGAAACAGAAGGAGGTGATCGAAGGCTACCGCACGAACGAAGAGTCACT Gene GeneID:506194|TACC3:NM_001100305:48_cdna Constitutive 0 NULL GeneID:506194 6 GENE TACC3 NULL transforming, acidic coiled-coil containing protein 3 EMBV3_14850 AAGAAGGTGGAGGAGAAGAAGACCAGGACTACGATTTGAGCCAGCTCCAGCAGCCTGATA Gene GeneID:281062|CDH2:NM_001166492:49_cdna UTR3_Alt 2 NULL GeneID:281062 24 GENE CDH2 NULL cadherin 2, type 1, N-cadherin (neuronal) EMBV3_28352 TCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTT Gene GeneID:100300443|LOC100300443:XM_002686237:257_cdna Constitutive 0 NULL GeneID:100300443 3 GENE LOC100300443 NULL hypothetical protein LOC100300443 EMBV3_16634 ACTGGCTCAAGTGCCCATGGTTTGCTTAGGGCACGGGAACTGGCCGTGTTAATTTATTGA Gene GeneID:509419|HMGXB3:XM_002689290:123_cdna Constitutive 0 NULL GeneID:509419 7 GENE HMGXB3 HMGX3 HMG box domain containing 3 EMBV3_23941 GTGGGCTTGGCAGCACCTTTTTTCTGTGTATCTGCGAGGGCGGCTGCTTTCTGTGAAATT Gene GeneID:618738|SULT4A1:NM_001076518:216_cdna UTR3_Alt 2 NULL GeneID:618738 5 GENE SULT4A1 NULL sulfotransferase family 4A, member 1 EMBV3_39549 CTCTAGGGCACAGAAGCAGTGCCGCAAGTCGTCGTTCGCCTTCTACCAGGCCGTGCGCGA Gene GeneID:532402|ANKRD9:NM_001102144:265_cdna Constitutive 0 NULL GeneID:532402 21 GENE ANKRD9 MGC179282 ankyrin repeat domain 9 EMBV3_39439 TGGTGGAATGTTGTCACTGGGGAATCCTCACAGACCTTCTACACAAACGGAACCAATCTT Gene GeneID:537782|APAF1:XM_002687626:766_cdna Constitutive 0 NULL GeneID:537782 5 GENE APAF1 NULL apoptotic peptidase activating factor 1 EMBV3_37659 GCTGGTATGATGAGGTCCATGATTTTGTTTTTGAAGTAGGGCCGAAGAGTCCTCAAGCAG Gene GeneID:618612|CRISP3:NM_001079635:368_cdna Constitutive 0 NULL GeneID:618612 23 GENE CRISP3 NULL cysteine-rich secretory protein 3 EMBV3_33317 TAAACAGCTTCTCTGTACTCATTTGGCGCTCCCCCCAAAAAAGGAGCCATTGAGATGGGG Gene GeneID:514739|MAP1B:XM_002696266:56_cdna UTR3_Alt 2 NULL GeneID:514739 20 GENE MAP1B NULL microtubule-associated protein 1B EMBV3_24267 CACAGGATCCACATCGACTCCGAGGCCCAGCACTGACCCAGCCAGAGGCCTTCCGAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03328 CACAGCTGGCATCTGAAAGTAACTGTGATCAGTGACCTCGGCCAAGTTGAGAATTAGTCT Gene BVT0102_419783 + 1 EMBV3_30332 GK000011.2:103672323-103734903 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32232 CGGCGTCTGTCTTGTCCTTCGATTTCTCTGCTGTCCTCGTTCATGTCTCTGTCCACATGT Gene GeneID:513668|COL27A1:XM_002689949:124_cdna Constitutive 0 NULL GeneID:513668 8 GENE COL27A1 NULL collagen, type XXVII, alpha 1 EMBV3_23348 TCACGGAGCAGCAGCCTTCTACCAGCCAGGATGAAGCAGATTAGATCTAGGGCTTGAAAA Gene GeneID:504683|MAK16:NM_001075170:21_cdna Constitutive 0 NULL GeneID:504683 27 GENE MAK16 RBM13 MAK16 homolog (S. cerevisiae) EMBV3_33511 CAGTAGAAAGGTTTGACAGTTTCTCTTGCCTGAGACTTGCATCTGGTGGTGAACCCTCGG Gene GeneID:513466|TEAD3:XM_002697210:105_cdna Constitutive 0 NULL GeneID:513466 23 GENE TEAD3 NULL TEA domain family member 3 EMBV3_32432 TCAGCCTGCAGACCCCACCTTAAAGCAGAAGATGCTGCCCAAAGTGCTGGCCATGATCCA Gene GeneID:517724|GSTT1:NM_001046232:64_cdna Constitutive 1 NULL GeneID:517724 17 GENE GSTT1 MGC134566 glutathione S-transferase theta 1 EMBV3_25803 GGGTTCCATGCTGCAGTGAAAACATCCTGCATTCTACAGCTAAGACCCAGCACAGCCAAA Gene GeneID:538021|DAGLB:NM_001083487:263_cdna Constitutive 2 NULL GeneID:538021 25 GENE DAGLB MGC143054 diacylglycerol lipase, beta EMBV3_28032 TGGAGCGTAAAGCTCTTTCTAGCTGCCTGTGGCCTCTGAGAGGGTCAGGGAATGAACTGA Gene GeneID:100141141|LOC100141141:XM_002695512:325_cdna Constitutive 2 NULL GeneID:100141141 18 GENE LOC100141141 NULL similar to zinc finger protein 132 EMBV3_30834 CCTTCGGAAGTGAAAACTGCTTTTCTGCCCCCATAATGAAATCTTGATTCCCGAGTCTGG Gene GeneID:281110|CYB5A:NM_174033:52_cdna UTR3_Alt 2 NULL GeneID:281110 24 GENE CYB5A CYB5 MGC128769 CYB5 protein EMBV3_03526 CTGTTGGTGTACAGATCAGGGTGCTTCTCAGGATAGTGTTCTCCAGGTAGGGGACAATAG Gene GeneID:539058|ZNF672:XM_002689109:53_cdna Constitutive 0 NULL GeneID:539058 7 GENE ZNF672 NULL zinc finger protein 672 EMBV3_41941 CCTGGTGGAGAAAAAGGAGGGTCCAAAGGGAGAGAGAGCAGTCAAGCCAGTAATCTCACT Gene BVV0102_123727 + 0 NULL GK000027.2:6225129-6265764 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00010779 TCONS_00253025 TCONS_00200933 TCONS_00238445 TCONS_00062753 TCONS_00250197 TCONS_00124927 TCONS_00064414 TCONS_00152859 TCONS_00210177 TCONS_00231502 TCONS_00199063 TCONS_00186108 TCONS_00165813 TCONS_00248863 TCONS_00109859 TCONS_00249283 TCONS_00023615 TCONS_00252354 TCONS_00008225 TCONS_00009883 TCONS_00135547 TCONS_00010052 TCONS_00006222 TCONS_00223827 TCONS_00239219 TCONS_00161793 TCONS_00175545 TCONS_00040583 TCONS_00055867 TCONS_00208127 TCONS_00137302 TCONS_00117484 TCONS_00040195 TCONS_00065249 TCONS_00244654 TCONS_00123618 TCONS_00238457 TCONS_00249989 TCONS_00207068 TCONS_00190323 TCONS_00152628 TCONS_00066192 TCONS_00072815 TCONS_00177280 TCONS_00089138 TCONS_00206861 TCONS_00250580 TCONS_00064927 TCONS_00253665 TCONS_00062743 TCONS_00156997 TCONS_00187057 TCONS_00133066 TCONS_00125001 TCONS_00063180 TCONS_00245928 TCONS_00107574 TCONS_00153219 TCONS_00250099 TCONS_00010466 TCONS_00252056 TCONS_00244651 TCONS_00223462 TCONS_00124845 TCONS_00088087 TCONS_00030942 TCONS_00142124 TCONS_00135701 TCONS_00006827 TCONS_00157440 TCONS_00241788 TCONS_00022065 TCONS_00250881 TCONS_00020016 TCONS_00201733 TCONS_00167497 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00179470 TCONS_00222115 TCONS_00244653 TCONS_00056147 TCONS_00054954 TCONS_00110327 TCONS_00070840 TCONS_00154085 TCONS_00063487 TCONS_00207359 TCONS_00070810 TCONS_00224114 TCONS_00175199 TCONS_00047158 TCONS_00030941 TCONS_00250938 TCONS_00050046 TCONS_00156870 TCONS_00116696 TCONS_00008097 TCONS_00124110 TCONS_00240475 TCONS_00020010 TCONS_00249570 103 XLOC_006139 XLOC_131641 XLOC_006330 XLOC_155966 XLOC_122583 XLOC_145112 XLOC_037480 XLOC_153140 XLOC_076470 XLOC_039138 XLOC_092624 XLOC_128687 XLOC_140991 XLOC_120716 XLOC_112161 XLOC_100653 XLOC_151806 XLOC_065763 XLOC_152226 XLOC_014282 XLOC_155295 XLOC_003783 XLOC_005436 XLOC_081770 XLOC_005604 XLOC_001785 XLOC_137126 XLOC_145885 XLOC_098678 XLOC_105326 XLOC_024399 XLOC_033675 XLOC_126640 XLOC_083512 XLOC_071650 XLOC_024012 XLOC_039971 XLOC_150512 XLOC_075170 XLOC_145124 XLOC_152932 XLOC_125587 XLOC_116358 XLOC_092393 XLOC_040909 XLOC_044583 XLOC_107054 XLOC_053924 XLOC_125381 XLOC_153523 XLOC_039651 XLOC_156604 XLOC_037470 XLOC_095457 XLOC_113105 XLOC_080989 XLOC_076544 XLOC_037907 XLOC_150855 XLOC_063484 XLOC_092984 XLOC_153042 XLOC_006017 XLOC_154997 XLOC_136762 XLOC_076388 XLOC_052874 XLOC_017192 XLOC_086549 XLOC_081924 XLOC_002389 XLOC_095895 XLOC_148452 XLOC_012736 XLOC_153824 XLOC_010694 XLOC_123378 XLOC_102333 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_109243 XLOC_135424 XLOC_033950 XLOC_032763 XLOC_066231 XLOC_042617 XLOC_093846 XLOC_038214 XLOC_125876 XLOC_042587 XLOC_137410 XLOC_104982 XLOC_027294 XLOC_153881 XLOC_030177 XLOC_095330 XLOC_070862 XLOC_003657 XLOC_075662 XLOC_147139 XLOC_010688 XLOC_152513 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_32079 TTGGACTGCCAAGGAAACCTGGCTTATGCAACCTCAACAGGGGGCATCGTCAACAAGATG Gene GeneID:767970|ASRGL1:NM_001077035:127_cdna Constitutive 0 NULL GeneID:767970 29 GENE ASRGL1 MGC133821 asparaginase like 1 EMBV3_41249 CAGCTGGATGTGGAGACTGATCTTCCTGCCAAACCACATGATGTCGCTCTGTACCGTAAA Gene GeneID:787538|PCDHA2:XM_002689243:125_cdna Constitutive 0 NULL GeneID:787538 7 GENE PCDHA2 NULL protocadherin alpha 2 EMBV3_29159 GGTTTCAACCATCCACGTGCTGGCAGACCCCTTGGTTTTACGTTTGTAGTTACTGTACAG Gene GeneID:533720|SWAP70:NM_001080297:164_cdna Constitutive 0 NULL GeneID:533720 15 GENE SWAP70 HSPC321 SWAP switching B-cell complex 70kDa subunit EMBV3_43071 AAGGCTTACCCGGACGAGAGCGGGTCGCAAAGATTCTGCTTGCCATCTTCACTGTGCTCA Variant GeneID:512373|DAK:NM_001024524:76_cdna 62^273 2 EMBV3_38261 GeneID:512373 29 GENE DAK DKFZp586B1621 dihydroxyacetone kinase 2 homolog (S. cerevisiae) EMBV3_03828 CTTGGAATGTGACCATCATGGAGGAGACTACAAACACTGGAGAGAGTGGGGTTCTCATGC Gene GeneID:282202|CRYBA1:NM_174523:34_cdna Constitutive 1 NULL GeneID:282202 19 GENE CRYBA1 NULL crystallin, beta A1 EMBV3_15595 TCAGTGCCACCCACAGACTCAAGCCTGAAGAATGGAGCTGGAAACTTGGCACGGTTTTGT Gene GeneID:100297090|LOC100297090:XM_002697733:214_cdna Constitutive 0 NULL GeneID:100297090 24 GENE LOC100297090 NULL hypothetical protein LOC100297090 EMBV3_28273 CTGGTTTTGGAATAGCAGCCTCACACTGGCACATGGACTGTTCTGTAGATTAATGCAAGT Gene GeneID:286862|YWHAG:NM_174793:59_cdna Constitutive 0 NULL GeneID:286862 25 GENE YWHAG MGC166400 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide EMBV3_16513 TACAGCACGTCGGTCACCGGCTCCCGCGAAGACTATGAGCTCTTCGTGGAGGCTGTGGAA Variant GeneID:614672|SH3BGRL3:NM_001034763:275_cdna 146^313 1 EMBV3_09782 GeneID:614672 2 GENE SH3BGRL3 MGC126914 SH3 domain binding glutamic acid-rich protein like 3 EMBV3_27753 TGTGACTCCAATATCATCCACCACTTCCTCTGCGACATCAACCCTCTACTGAAGCTGTCC Gene GeneID:508785|LOC508785:XM_002691543:23_cdna Constitutive 0 NULL GeneID:508785 11 GENE LOC508785 NULL similar to olfactory receptor 355 EMBV3_38671 ATCCTCAGGTTGTGTGATTGGGTCTCTCATCACTGGGAAGCAGGTTGCAGGATTCTCCCT Gene BVV0102_099144 + 0 NULL GK000023.2:30505477-30517602 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31655 GGTCTACAATAATCGACAAACCTTCTCAGAGGTGCCTGTGCTGATAGAGCTGCAACCACC Gene BVV0102_369944 + 1 EMBV3_21742 GK000019.2:27735193-27747546 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35869 ATACTGGGAGGCATTCCTACCTGAGGCCAAAGCCATTGCCTAGCAAGAAGATTATTCCTG Gene GeneID:509769|SNX2:NM_001038519:11_cdna Constitutive 0 NULL GeneID:509769 7 GENE SNX2 MGC134133 sorting nexin 2 EMBV3_20619 CACATCATCATATGGGCAACGGCTGTACAAAAGTCACCCTGACACAAGCATGATCGCTGG Gene BVT0102_421921 - 1 EMBV3_37730 GK000017.2:47352600-47582026 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075352 TCONS_00075350 TCONS_00075345 TCONS_00075348 TCONS_00075349 TCONS_00075353 TCONS_00075351 1 XLOC_046558 Coding TCONS_00075348 XLOC_046558 Coding Coding STX2 17:47313603-47354740 = TSS56843 3100 1 TCONS_00075348_2 287 10 0.924883313885648 0.000567920510747031 0.00129822632018758 0.000829650864815023 3.47780498287754e-05 0.000573869496969502 0.000188463573126243 0.000159356360401237 8.94570964411805e-05 0.00206353579253284 1.76690191429377e-30 1.57411470219332e-06 6.55870317873757e-06 0.000147225570855151 0.000647367149545437 0.000141695331894091 0.000158312202604891 1.04270238844714e-11 8.6568173275308e-33 0.00073961939280105 0.000226513682871803 0.000234699702097894 0.000242450602668057 0.000397563523709733 0.000384548424285065 0.000395409236278757 0.00131763394056694 0.00111862729485563 7.36940533273217e-05 1.75306146595469e-05 6.94311977661271e-30 XM_003583301.2 STX2 PREDICTED: Bos taurus syntaxin 2 (STX2), transcript variant X1, 0.0 5588 100.00 0.999032258064516 NM_001980.3 STX2 Homo sapiens syntaxin 2 (STX2), transcript variant 1, mRNA. 0.0 1415 84.09 0.41741935483871 TCONS_00075348_2 sp|P32856|STX2_HUMAN STX2_HUMAN Syntaxin-2; 0.0 526 88.85 0.996515679442509 2 coding 0 0 0 0 0.0786667891319416 0.485799217947598 -0.0614389274070805 0.368057398580515 CGCCGGCCGAGGGGAGGGCGACCGGCGGGCTGAGGCGGCGGCGGGGACATCGAGAGCCCGCGGCCAGCCGGAGGCGGCGCCGGGCAGGCCTGAGCGGCGGGGCGCGGCGCCCGGCCCGTGGGGATGCGGGACCGGCTGCCGGACCTGACGGCGTGTAGGAAAAATGATGATGGGGGCACAACTGTTGTTGTTGAAAAGGACCATTTTATGGATGATTTCTTCCATCAGGTCGAGGAGATCAGAAACAGTATAGCGAAAATAGCTCAGTATGTCGAAGAAGTGAAGAAAAACCACAGCATCATTCTTTCTGCACCAAACCCAGAAGGAAAAATAAAGGAAGAGCTTGAAGATCTGAACAAAGAAATCAAGAAAACTGCTAATAAAATAAGGACTAAGTTGAAGTCTATTGAACAGAGTTTTGATCAGGATGAGGGTGGAAACCGAACTTCTGTGGAGCTTCGGATACGAAGAACCCAGCATTCAGTGCTATCTCGAAAGTTTGTGGAAGTCATGACAGAATATAACGAAGCACAGACTCTGTTTCGGGAGCGAAGCAAAGGCCGTATACAGCGTCAGCTAGAAATAACTGGAAAAACTACCACCGATGATGAGCTGGAAGAGATGCTGGAAAGTGGGAATCCCTCCATCTTCACGTCAGATATTATATCAGATTCACAAATTACTAGACAGGCTCTCAATGAAATTGAGTCCCGTCATAAAGACATCATGAAGCTGGAGACAAGCATCCGTGAGCTACATGAGATGTTCATGGACATGGCCATGTTCGTCGAGACTCAGGGTGAAATGATCAACAACATAGAAAAAAATGTTATGAATGCCGCAGACTATGTAGAACATGCAAAAGAAGAAACGAAGAAAGCTATTAAATATCAAAGCAAAGCAAGAAGGAAAATGATGTTCATTATTATTTGTGTAGTTATTTTGCTTGTGATCCTTGGAATTATCCTAGCAACAACATTGTCATAGCAACCGTATCCCAAGAGCCATTTGTCCTTGGAGTCAGACCACATCTGCAGCAAATCAGCATCCTCCCATTTCATGAATGAATCCTAGACATTGTGACATGTGGCATTGAGTGCTGATATTTTATTAGTGAATTCAAGGAGAGAGCACAACAGAATGTATTGTTCAGTGGAAAAAACAGAATGGATGTGATGCGTTAACCCAGACATCCTTGGACTCTAAATAACACAGCACAAACATTTAACAATGTGAGACTTGTTTCAATGGCCTTAAAATAAGGAATCATTGAAATTTTCAATTTTTTTAATATATTTCAGTGTTAAAAATATGTATGTGAATTAGGAATATCTTATGTTATGAAGTTATTAGATTTCATGTCTGAGACTTTCTTCCCTCTCCCAGCTAACATGCTCATTAAGAGACATTTTTGTACTATGTTTCACTCATGTCTGTTTATGTTTGCAAAAATTATTTTTATTATCACAGAGCTGTTTTGTAAGATATCTATAAGTTTACATGTTTATAAATTAATTGTTTAATATATTAACATCTTAATTTACTCCGATTTTATGTATTAACTATTGCCTTTAAAAGAAGTAGGAAAGAAACGTCATGATGTCAGAGCCATCTTTGCACAGTTGTTTACACAGTTTGCCATCGGCATAGAAAACATTGGTTGCAAAGTACCCCAAAAAGCCTTTCTAGTTCCTTCTGTTGAAATTGATTTATAAGGTTCAAATCTGCCCAGTACCCTCCAGGAAAAGCTCGATTATTGTACTCAGCTTCCTCTCTACCTGTTCCATTACCCAAGATAATAAATTAGTTACTGCAATGTAAAGACAATGGTCTCTGCTTTCATTCTTTACAAAATAAGGTTTGTGTTTCCCTGTTCACACTAATAATGTCTGAATTTAAGGTGGTGATAAAATCAAATTTTAAACTCAAGGGGATCATTCCCAGACATTAAGTCATTCTTACATGTACAGATCACCTGAATGTTCTTGTTACATACCTACTATTCTGCTGAACTTTAAAAGTTAATTCTCAAAGTTTACAGGAATCCGTAATTAACATTTGTATTACTTCTTAATTTTTTAAAATTATAATGTGCTTTATATTTAGACTGTAAAATGTACGAAATCTTATTAGCAAATGGGCATCTATATGATAGCAAGTAGTCAAAACTTTAAATGAATATGTGAAGGATATTAAAAATATAGTTATCTCTTGTTATTTCTGTATGTGATTGTGTAAGCTCGTGACTGTAATTTAACATTGTCTGGCTTGAAAACTAATATATAGACACGCCTGATTGCAAGCTGTAAGTGTGAATTACAGAACCGTGTAGAAGCTGTGCTCCCTCTTGAATACAGTTACGAATTTCACGCGTTCATACTTTATACATCTGACTGCTTAGCTCAGAGTCAAGTCTGTATGTGTGCATTTTATTTTCTTGCTGGTCATTACTGTGCAGTCAGGATTCCTTTAGGAGTCTTCTGGCTCCAACATATATGTTTCTTAAATCTTTAGCCCATCAGTGAGACAGGCTCCCTTGTTGCTGCTTATGTTGATGGCATGACTTGTCCTGAGGGAATTTAACTATCCAGCGATCATGCTTGTGTCAGGGTGACTTTTGTACAGCCGTTGTCCATATGATGATGTGCACGCGTGGAGACACTTCATGCTCCCCACGTGTCCTGCTGTCGCTTCAAGTAAAGTCTTTTTAGCCCCCACTCCTCATAGCAATTCTTCTTGTATCTCTTCAAGACATTCTTCCTGGATTTGAAACACCTACTGAATCTGTGTTTTATATAGTTGAAGTTATGAAACCGCTTCTTGATTTCTACTTAAGGTGTTTAAGTTCACCAGGTAACCCATTTTGTATGTCTAAGCCTCATGTACCTATTTGACATCGGATTTTTAAAAATACATATACAGGTTCACTTGTTACTTTTTAAATCATTTCTTGAAATGTCATGTTTACATTAAAAAAACAAAACAAAACAAACTCAAGAGAACCCAAAAAAAATATTTTACTTTCTGCCTTGTTCATTTCTGGAAAGATTTGGGGGGAGATATTTTATTGCATATCCATAAATAAATTGTTAAAAGAATA EMBV3_40123 AACTCGCTGATGGCCCCGGTGGGCCGCTGGCTGAGCAAGGAGGATTTTGTCGAAGTTTGT Variant GeneID:506656|C1orf35:NM_001034272:14_cdna 184^336 2 EMBV3_04061 GeneID:506656 7 GENE C1orf35 MMTAG2 chromosome 1 open reading frame 35 EMBV3_35100 AAAACAAACATCATACACAGATTCTGGGCTGCATGGGAATTAGCACTCCTATACCCTGTG Gene BVV0102_229815 + 0 NULL GK000017.2:41784197-42806001 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07005 CCCACTGACTATAAAAATCTTCCCCAACAGTTTGCCAGACGCGGGCGGGCGTCAGCACTA Variant GeneID:506074|LOC506074:XM_002695749:452_cdna 195^823 2 EMBV3_07531 GeneID:506074 19 GENE LOC506074 NULL similar to Chromosome 17 open reading frame 63 EMBV3_37169 CGTGCCAGACATCACAGAGTGCCAGGAGAAGGACGTCTTGTGCATGTTTGAAGCAGAAAT Gene GeneID:327701|NDUFB10:NM_175818:45_cdna Constitutive 0 NULL GeneID:327701 25 GENE NDUFB10 PDSW NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa EMBV3_03020 CATGAAGAGCTGGTGTCCGTGTTCATGTTTCAGGAAGAAGCTGTTGAAAGAACTGCTGTG Gene BVT0102_054618 + 0 NULL GK000002.2:104638007-104656344 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103234 TCONS_00103227 TCONS_00103230 TCONS_00103233 TCONS_00103232 1 XLOC_062046 Coding TCONS_00103234 XLOC_062046 Coding Coding TMEM169 2:104638518-104652533 j TSS76689 3874 1 TCONS_00103234_4 351 0.162364481156427 3 0.723776223776224 5.31605251836326e-08 2.69279911040004e-08 1.04509561784502e-14 0.00035196127956239 1.37621366589154e-07 0.000331586993421595 7.1737890933473e-06 0.000402580472633272 0.000618498872794577 0.00033096927154478 0.000162171821557307 1.77450312865218e-08 1.48051877020729e-05 6.28021278080822e-07 2.19460577763325e-09 0.000480853888648723 0 8.00022584697438e-05 4.96181580403111e-05 2.18849733178943e-10 2.89981459098483e-08 0.000499614391333404 0.000474114059323689 0.00021350715198157 0.000890944097758553 0.000505315850729492 0.00053124995466599 7.34093289519086e-05 0.00013994151431178 0.000154353349505881 XM_005202790.1 TMEM169 PREDICTED: Bos taurus transmembrane protein 169 (TMEM169), 0.0 5665 100.00 0.810531750129066 NM_001142311.1 TMEM169 Homo sapiens transmembrane protein 169 (TMEM169), transcript 0.0 1660 79.25 0.498451213216314 TCONS_00103234_4 sp|Q2TBG9|TM169_BOVIN TM169_BOVIN Transmembrane protein 169; 0.0 615 100.00 0.843304843304843 1 coding 0 0 0 0 -0.198173750428675 0.170305933735262 -0.0307100270430094 0.580488785185016 GGGGGAGAAAATCTTGCTTCATCCTCTGGAAGGGATGGAAACAAAAGGTGGAGGGGGCGGAATACAATGTGCAACTCGTCACTGGAACGCCTTTGCATTAGCTGCATCCTGGAAGAAGCTCTGTGATGTTGTGGGTCATGAGTTTGCTCTGGCAGATTGGACTCTTGACAAGGAACAGCTAGATTTGAAGACGAGGATGGAAGAGCCAGCACTGGTGGAAGGCCAGAGTCAGCTCCCCAGCCCCCACCACAACTCCCTGAGGAAAGCCATGGCAGCTGCTCTGGTCCTCGATGGAGAATCCACCATGGGGCGCAGGAAGAAGAAGAAGAAAGAGTCCCGCCCAGAATCTATCATCATCTACCGGTCAGAGAGTGAGACACTGGATGAGGAGCCTGGGGAATCGGAAGGTGGAGATCAGCCTAAAGAGGAGGAGGGAGATGATTTCATAGACTATCCTATGGATGATGGTGTGTGGAACGTGCCCGTGGACAGCCGCTATGTCACATTAACTGGGACCATCACCCGAGGAAAGAAAAAGGGGCAGATGGTAGACATCCATGTCACGTTGACAGAGAAGGAACTGCAGGAACTCACCAAGCCCAAGGCATCGTCAAGGGAAACAACACCTGGAGGCAGAAAGGCCTGCCAGCTGGGAGCAGACCGTGGGCCACACGTGGTCCTCTGGACGTTGGTCTGCCTGCCTGTGGTTTTCCTCCTCTCCTTTGTGGTCTCTTTCTACTATGGCACCATCACTTGGTACAACATCTTTCTCGTATACAACGAGGAGAGGACCTTCTGGCACAAGATCTCATGTTGCCCCTGCCTCATCCTCTGCTATCCAGTGCTCATCATGGCCATGGCCTCTTCCCTGGGCCTCTATGCGGCCGTGGTCCAGCTCTCATGGTCCTGGGAAGCCTGGTGGCAAGCTGCCCGGGACATGGAGAAAGGCTTTTGTGGTTGGCTATGCAGTAAGCTGGGTCTGGAAGACTGTTCTCCCTATAGCATTGTGGAGTTGCTTGAATCAGACAACATCTCAGGCAACCTGTCCAACAAGGATGCCACCCAGGAGATAGAAACATCCGCTGTCTAAATTCCCAATGACTTACTTCATTCTCTGGTCTTAGTAGCCTGTTTATCATCTTCCAGTTTCAGAATACTCCTTGTTTAAATTATTCCTTCTCTCCCCACTATACACTGTTCTTCTGGAAAATTTTAGCCCACACTTATCTGTCGTACCATCTTGTTGGTTTTCGGGAGGGCAGGAAACGGAAAAGCAATTTGTGCCCAAATAGTCCATCTAATGGATAAACTCTTCTTTGTTCCTTACCCTAAGATAACCCTTTATCTGAGACAAGGAAGTTCAGGTGTGCAACAGTTCAGGAACTTGAAGGTATTCCTGGTGCCTGGAACCCAGGTTAGTATGTGACTAAATGTGACAGGGAGACTAAGGAGGCTCAGGGAAGACCAAATCCACTAATAAGATAATAGATAGTGATGGAGTGAAACATATAAGAAGCAGGGTTGCTACAGTGTAGCAGAATGTAAGAATTTGTGTGTATCACTTAGATTTTGATTTATATCTTAAATATAATCGAAGTCCAAATAGCAGTAGTTTAAACAAGACAAAAGTCTGTTCTTTCTTGTACAGAAGAAGTCTGGAGGCAGACCATCAGGGAAACTGATAAAGTCATCAGAGTTCCAGGCTTTCTTTTTATTTCCCAACCCTCATCGCCTTTATCCTCAGCAACCAGCGCTGACTACATCTCCAGTCGTCCCATCCATGTTTCAGACAGAACAGAGGACAGGGCAGAGAAGAGCACATACACTCTCCCTAAGCTAAGGAGGTTTCCCAGGAGTCCCTTTCAACACTTCTTCTATCTCATTGGCCAGGCCTTACTCACATGACCTCATGAGCAAAAGAGGCTGGAAAATGTAGTCTTTTGACTGGGCAGCTGTATTCTAAATATTTGGATTCTGCTAATTTAAGAGACAAGGAAAGAATGGCTATTTTGGTAGGCAAGTAAGAGTCTCTGGCTTACAGTAATTATTTAAATACATTCAGATCCCAAACTGTGAATACAGTTCTATTTATGTATTTATTTATTTAAGCCTAAATCTTACACAGAGAACTTATACATAGATACTAGCTACATATACTATGCATAAACCACACAGATATTAGCAACTCGTGTGTTGCAATTAAATATCTGTAATGCCATATGGTTTCAGGTGTTTTCAAAAGGAAGAGTGGATAGCTGAGTACAATTGTATCATGTACAAATTATAGTAGCATAGCTTTTTTCCAGGTAGTGAAGATGGACTGGGTGATGATATTTAATGTAATGTACAGATGAAGGACTGGGAAGAGAGGCATTGCATCTGTCAGACATTCCCCCGCCCCCGCCCCCGCTCCACAACCCCCAGCAGGGTCAGTAACCCTAAGCAAAAGAAGATGGAGTCAGCTTTGGGTGTGTGTGTGTGCTCAGTCATGTCCAACTCCACAACCCTATGGACCGTAGCCCACCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGCAAGTTGCCATTTCCTCCAGGGGATCTTACTGACCCAGGGACTGAACCTATGCCTTCTGTGTCTCCTGCACTGGCAGGCGGATTCTTTACCACTGAACCACCTGGGAAGCCCCAGCTTGGGATGGTTTGACCAAACCTCACTCAGAATTTTCTGGAGTTCATCAACAAATACAATCTTTGCTGAGAAGCTTGGATCTTTGTGGCCACTGAGGGTATAAACCCTAGATGAATCCAGACTAATACATTCTGAACTTAAAAAAATTCCTGAGGGATCCCTTTCTAATAAAAAAAAAAATCGTATGCGGTCACACAGATTTTTAAAGTTTGGGTCCTTACATGAAGAGCTGGTGTCCATGTTCATGTTTCAGGAAGAAGCTGTTGAAAGAACTGCTGTGAATCAAACCCAATGGGTCAGGTAACACTGTGCCACAGAAGGCCAGGGGCATTCGCCTAATGCATGGTGCTGAATTCCCCCTTTAGAGGGAAACCCATCCTTTTAAAAATAACTATCATTAGTTTGAAAAAACCCAACTCTGTCCAACATTATTGAAGATAACTTTGGTGCTGTCTGGTGGTTTTGCAGAGATACAAACAATTGAAATGAAGACAACAATAAAATCTAATTAACGTTTGCTCACTTTGTCTCTGAGTCTCTCCAACATTGAACACTACAGTTTTCAGAAAAAGAGTGAGTGTAGTGACTGTTTTATAGGTGTGTAATGGTCTTAATATGGGTCCTTAACATCTTGACTCTTCCCATCTGCCACCAATTTGTGAGGCTTCTGTTTCGGTGGACTCTTCCCACAGATCACAGATTTACCTGAGCCTACATTAGGAAGTTGCAGCTTTATTTGCCACGTTTTTTTCAGAGGTTAAGGAAACCAGTGGGCAAGGTCCAAAGCAGTCACGATTAGGACAAAGGTAAGATGTCCCTGCGGGATGGAGGAGGGTGGGGTTAGGGTAAGGAACAAGGGATACCTAGATGAAGTAGATGTAGCCCTCACCCTAGTTGAGCTCGCCAGCTAGTGGAACCCATAGGTTCATAAAATCATGTCAAAAGGGCTCTGAGAGAGAGATGGAAAAGTCTTAAACTAGAGGAAGGAAAACCTCACCAAACAGACCCAAAGCAATCTCATCTCAGCTGTTAGCAAATGCCTAGAGAATTTTAGAGGAGAAATTAGAGATTTAAATGCCATATTTGAACATTCTGTTAGCTCATAGTTACATAATCTCTTTGGTAAATATCAGGAAGGAGGATTATGCTTTCCAGTTGCTTTGTGGGCATAATATACTGAGCTGAGTAAAC EMBV3_40087 TGACAAGAATTGAAGCTGGAAAAACCCTTGGCTATAGCCGTTTGCATGGAAAATGGCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10125 GCAGACAGAGCCAGAACTCTATACTTTTGAATGCCCGGTTTACCAGACACCTGAGAGGTC Gene GeneID:516576|LOC516576:XR_084592:186_cdna Constitutive 0 NULL GeneID:516576 16 PSEUDO LOC516576 NULL similar to hCG22803 EMBV3_21293 CCAAGGACACAGGCCCCAGCTGGCTCGGAGCTGGAGGGAGCTCCTAAATTCATATTGAAT Gene BVV0102_243590 + 0 NULL GK000022.2:59688331-59689937 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21870 CCATTAAGGAGAAGATCAGCATGTGGACTGCACTGTTTACATTTGGTTGGACTGGGACAG Gene GeneID:511543|TMEM22:NM_001075524:24_cdna Constitutive 0 NULL GeneID:511543 1 GENE TMEM22 MGC140693 transmembrane protein 22 EMBV3_39143 CAGTCTGGCCACAACACCGGTCTCATCACGCAGGTCAGGATTGTCAGGTGTCAGAGTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19664 ATGCCCAGTACAAGGAGCTGCAGAAATATGCCTGCGTGTCATCTCGGAATACCAGAAGCT Variant GeneID:540602|NANS:NM_001046482:38_cdna 385^667 3 EMBV3_31351 GeneID:540602 8 GENE NANS MGC137759 N-acetylneuraminic acid synthase EMBV3_24766 ATAAAAATTCCTCAGCTTTGCCTAGCCCCCTGAATGTCTATTTTTAAACAAATGTGTAAT Gene GeneID:509328|CSGALNACT2:XM_002698829:69_cdna Constitutive 3 NULL GeneID:509328 28 GENE CSGALNACT2 NULL chondroitin sulfate N-acetylgalactosaminyltransferase 2 EMBV3_09772 CTTTGGTCCGCACTACGTGGGCGAGGAGCGAGGCGCATTCTCCTCTGGGCCGCCTCGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17502 CGGCACTACCACGGGCTGCGGGCTGCCCAGGTCAGGGCCCCAGCAAGAAAGCAGCCAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16770 CAGATCTCGGCTCCGGTGTCGGAGCAGATGGGGCTATCTTCACTTTGGTGTCTCTGAAAG Variant GeneID:618247|LOC618247:XM_002686553:822_cdna 295^475 2 EMBV3_15585 GeneID:618247 3 GENE LOC618247 NULL similar to ZMYM6 protein EMBV3_28401 TGCCGGCCATGCCCTACTGGCCTTTCTCCACGTCTGACTTCTGGAACTACGTGCAGCACT Gene GeneID:617392|OTOS:NM_001114525:38_cdna Constitutive 0 NULL GeneID:617392 3 GENE OTOS MGC148549 otospiralin EMBV3_32347 CTTCAAGTATCCATTTTTCACTTAGGGATTTGATTACTGGCTTGATTGCTGTCTCCCCTT Gene BVT0102_022658 + 0 NULL GK000002.2:98555235-98617455 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14414 GTGTACCCATCTCTGCCCATCACCGCTGGAATTTTGATGACCTGTTGGAAAAGATCTGGG Gene GeneID:540161|DRG1:NM_001034691:74_cdna Constitutive 0 NULL GeneID:540161 17 GENE DRG1 MGC127808 developmentally regulated GTP binding protein 1 EMBV3_40005 CCTCAAATTTTTCAATAATGGCCCTTAAAAATAACTAAATGAGTAAAACGAGCACATGAC Gene GeneID:618177|SYT11:NM_001099171:236_cdna Constitutive 2 NULL GeneID:618177 3 GENE SYT11 MGC152070 synaptotagmin XI EMBV3_29781 CGTGGAGCTGGCTAAACATGTCATTTACAGCATTTACAAGGTTTCTTCTCAGACTCCACA Variant GeneID:514705|PTCD2:NM_001035298:115_cdna 373^490 1 EMBV3_20403 GeneID:514705 20 GENE PTCD2 MGC128066 pentatricopeptide repeat domain 2 EMBV3_34379 GTACTCCTGCCATGATCTGAAAGTGTCACAGGTGACTGATAAATCTTGTCCAAGGATGAG Gene GeneID:281058|CD69:NM_174014:4_cdna UTR3_Alt 2 NULL GeneID:281058 5 GENE CD69 NULL CD69 molecule EMBV3_13720 TGTCAGCCAGACCCACAGCTTGCAAAGATGTAGGCGCTGCTTGTAGAGTCCACTTGTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35522 TCAACGGGGGCATCACCGACATGCTCACAGAAAAGCAGCATCTGTGATAGCAAAGTACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13380 TTCCAGGTCTCCTTCCAGCACCCACACAAGCTGGCAGCGGACCCCAGTCTCCATCACCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20298 AATGCAGTTCTCCACTGTCCATCTACACTGCCTGCTAGACTCAGATCACCTGCCTGCTCA Gene GeneID:511197|METTL1:NM_001046077:995_cdna Constitutive 0 NULL GeneID:511197 5 GENE METTL1 MGC134433 methyltransferase like 1 EMBV3_25650 GATGGTGCCAAGGTTTTCAGTAAGCAACCAGGAAGGATCCAGAGAGTAGCAAGAGGATCC Gene GeneID:614017|SRP54:NM_001038201:50_cdna Constitutive 0 NULL GeneID:614017 21 GENE SRP54 MGC133589 signal recognition particle 54kDa EMBV3_36577 CAGGGAGAAGTGATTGCTGGGAACTTAATGCCTGCAGTGCCCTGGAGCCCTTCGAAAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05481 GCTGGCCTGCTCTAGCATTATCGTCAATCACATCTATGGGCTCTTTGTCATGGCCTGCAC Gene GeneID:784379|LOC784379:XM_002707868:476_cdna Constitutive 0 NULL GeneID:784379 15 GENE LOC784379 NULL similar to Olfactory receptor 51G1 EMBV3_18040 CATTTGTAACCCCCTGCTCTACATGGCGGTTGTATCTCGGCGGATCTGTCTTCTGCTAGT Gene GeneID:100336916|LOC100336916:XM_002693681:325_cdna Constitutive 0 NULL GeneID:100336916 15 GENE LOC100336916 NULL olfactory receptor, family 5, subfamily I, member 1-like EMBV3_20374 TCCCTGGTTTCGCAGCTTCCCTTTTGTGTAGGAGAGGCCATGCGACCTGGTGAAACTTTA Gene BVT0102_315546 + 0 NULL GK000003.2:118771402-118937211 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180561 1 XLOC_110328 NonCoding TCONS_00180561 XLOC_110328 NonCoding NonCoding - 3:118894365-118895557 - TSS135320 1192 1 TCONS_00180561_7 87 0.223993288590604 1 0 0 0.0010790259970531 0.000372644116460236 0 0 0 0 0 0 0 0 0 0 0 0.000304579569523267 2.21573964311474e-05 0 0 0.000204540550583503 0.000699837909458784 2.54675599063846e-06 0 0 0 0.00012787454416044 0.000159586995715079 4.91539691795914e-06 0 0 0 0 noncoding 0 0 0 0 -0.0831874893834637 0.643243914782351 0.061705658558566 0.307823769095009 AGCAAATTATATCTGCAGGGCCCTACTTCGTGTTTGGAGGTTCTGGGTGGACATGGATTTGGGGGCAGTATTCAACCATGCCAGCATTACGCAGAGGTCTGTCTTCCCAATGACCCACCCCACCCCCACTCCCCTTCATCCCTGATGGGGAGCACTGTCACCTTCATCCCTGACGGGGAGCACTGTCAGCCTGGGGCAACTGTAGGAGTCCTGGTCCCTGGTTTCGCAGCTTCCCTTTTGTGTAGGAGAGGCCATGCGACCTGGTGAAACTTTATGTGCTGAAGTTTATGTGCTCTCCTACAAAAGGAAGCAGATGCAGTTGCTGCCATTCCCCACAGCTTCCCCTTTGTTCCTGGCTGGAATGCAAATGTGATGTCTGGTTCTTCAGCAGCCACTTGCAGCCAGGAAGAAACCAGCATGAGGGCAACAGCTGATTTGGGGGATGATGTCTGGAAGTGACACACAGAGCCTCGTCTGTGGAGGCATCACTGAGCAGCCAAACCTTCCTCTGGACTTCTAATGTGGGAAGAGTCCTGCAGCTGAGATGGTGACATTCACCCACGTTTGCCCTTTCTTCCTGGACACACAGCTGGATATATTTCCATCTGCCATTGCAGTCAGATGTGGCTGTGGGGCTGGGTTCTAGCCCAAGGAGAGCAGCAGAGGCTTGGGTGCTCCTCCCAGGCCTGGCCCCTGGTCCCCCAGTCTCTTTCTCCTCTCTGTGCTGGGGTGTGCATTATGCTGAGGCCCACGGTGGGGATGAAGGTGGCTGGTCCCTGAATCCCTGGAGGACCAGCGTGTCGGCAGACCAGAAACACCTGCCTTAGACATGATGGGAACAAGAAGTCAGTCTCCAGCCCTCCCGGAGCCACTGTGTGTGGTGAGGTCTGTTCCCGTGGCAGAGGACCTGCTCACAAGAATGCGTTTCCATGCTGAGGCACTCTCTGCAGGCAGGAGCTTGCCCAGGAAGCAGACCCCCTTCCCTGTTGCTGCCATCTAGCCCTACGTGGCTGCCCCTGGCCTGCCCGTGGCCTCCCCACTCTGCCCCACCCGTGGGCCAGTCTGCCCCTCTGCTCTCCGGGAGTTGCTGTGATGCTTGGCAGTGGAGAGCTGTGGTCACCTGCCAGGCCTTAGCACTCGTCTGTCTGGAGCACTGTGATGCCTTGGCCAAGCCCTTCAACCCCCTCACCCC TCONS_00174890 TCONS_00174891 TCONS_00174892 . 3' 41655 TCONS_00174890 TCONS_00174891 TCONS_00174892 . 3' 42846 EMBV3_02194 CCGGCCTGGTGTGGGAGTTAGTGCAGACTCCTGACTGATTTATAGCCTCCTTTGAGAACA Gene GeneID:767894|UBE2L3:NM_001078094:130_cdna Constitutive 0 NULL GeneID:767894 17 GENE UBE2L3 MGC127956 ubiquitin-conjugating enzyme E2L 3 EMBV3_41072 CTCAGCGTGGTTTACCTTTGGCAGCGGGACCAAGGTCACCATACCAGATCAGCCCAAGTT Gene GeneID:100336952|LOC100336952:XM_002694699:308_cdna Constitutive 0 NULL GeneID:100336952 17 GENE LOC100336952 NULL IGL@ protein-like EMBV3_02377 GAAAGACCAAAATCAAGAGCGAGGAGCAGAACGTGGTAAAACAGAAAAAGGGCAGGTGGC Gene GeneID:282077|SPARC:NM_174464:5_cdna Constitutive 0 NULL GeneID:282077 7 GENE SPARC MGC128090 secreted protein, acidic, cysteine-rich (osteonectin) EMBV3_27965 TGCCTCCTGGTAACCCTGTAATGGATGGGGCCCAGAAATGAAATATTTGAGAACAAGCAA Gene GeneID:506730|MACF1:NM_001143860:86_cdna Constitutive 2 NULL GeneID:506730 3 GENE MACF1 ACF7 microtubule-actin crosslinking factor 1 EMBV3_30453 TCCGCCGGATGTTCTGTCTCAGCGCTTGGTCCCTGGTGGCTTTCTCGGCCTCCCGGCGCC Variant GeneID:515997|E4F1:XM_002697924:569_cdna 139^428 1 EMBV3_23719 GeneID:515997 25 GENE E4F1 NULL E4F transcription factor 1 EMBV3_16324 CCGAGTATTAGTTGAAAGAAGTGCGGCCGATACTGTAACCAAAGCAGGGATTATGCTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00682 ATGTAAACAGATGAAACAGCGCTTTGAAAGGAAGAAGACACCCGTTATCAGAGAAAAAAG Variant GeneID:616277|RAGE:XM_002696774:463_cdna 168^328 2 EMBV3_19260 GeneID:616277 21 GENE RAGE NULL renal tumor antigen EMBV3_41665 ATACCCCAAGAGTGATGAGCTGAAGTCGCGCCGTGTGGACTTTGAGACTTTCCTGCCCAT Gene GeneID:515421|MYL6B:NM_001075713:1016_cdna Constitutive 0 NULL GeneID:515421 5 GENE MYL6B MGC140008 myosin, light chain 6B, alkali, smooth muscle and non-muscle EMBV3_05129 TGCGAGCCCTGGGATGGGGCTCACTTTATGCCTGGAAGAGTCCCGCCCTTCAGGCAGTGG Variant GeneID:517251|C9H6ORF35:NM_001046228:7_cdna 312^950 1 EMBV3_19628 GeneID:517251 9 GENE C9H6ORF35 MGC137528 chromosome 6 open reading frame 35 ortholog EMBV3_05903 AATGCCATGTTCGACTTCAGCGAGAAGCTCAACTCCCTGGCGCTTACCGAGGAGGAGCTG Gene GeneID:768225|NR1D1:NM_001078100:243_cdna Constitutive 0 NULL GeneID:768225 19 GENE NR1D1 MGC139653 nuclear receptor subfamily 1, group D, member 1 EMBV3_08796 GCAGTCCATAGGGTCGGAGAGTTGGACACAACTGAAGCAACTTAATACACACAAGGAGCA Gene BVT0102_183891 - 1 EMBV3_28862 GK000022.2:21498564-21614842 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130348 1 XLOC_079057 NonCoding TCONS_00130348 XLOC_079057 NonCoding NonCoding - 22:21520250-21520480 - TSS97215 230 0.747826086956522 1 0 0 0 8.04695410880491e-05 0 2.14659562868146e-05 1.55524262781678e-05 2.53552275936206e-05 0 0 0 0 0 0 0 0 0 0 0 0.000218244872426985 0 2.6397646014893e-05 0 0 0 0.000391609862113043 9.18973419959074e-05 0.000254745976897101 0 0 0 XM_005218130.1 SLC5A1 PREDICTED: Bos taurus solute carrier family 5 (sodium/glucose cotransporter), member 1 (SLC5A1), transcript variant X1, mRNA. 2e-14 82.4 96.00 0.21304347826087 0 noncoding GAGCCTGGCGGGCTGCAGTCCATAGGGTCGCAGAGTTGGACACAACTGAAGCAACTTAATACACACAAGGAGCATTTACAAGCATACTTCTTTATAACCTCGAAAGGTTGTACTAACCCTCCTAAGCTTCATTTCTTCATCTGTCAAATAAGGGTAATAGTACTAATTTCAAGGGGTTCTTGAGAGAATTAAATGAGAATTACAAAAAAACAGCTCTTATGTTCCCTGAC TCONS_00126472 . 3' 21700 TCONS_00126472 . 3' 21929 EMBV3_05547 CTGAGGCATCTGGGAGAGGTTATTTTCCTGTGGGCAGTCCTGGGGTCTGAGAATGAGCCA Gene GeneID:533668|DNAJB2:NM_001034592:101_cdna Constitutive 1 NULL GeneID:533668 2 GENE DNAJB2 NULL DnaJ (Hsp40) homolog, subfamily B, member 2 EMBV3_12227 GAAGGACCCACTCCTAAGCTCCCTCGGGATGTTGTCAGAAGTCAAGTGCTTGTGCTTGTA Gene BVV0102_306554 + 0 NULL GK000025.2:22832551-22843669 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29203 TGTGCCAAACTCGGTTGCAGCACTGATTGTCAGGGGGTGAAATAGGGGAAATCCTGACCA Gene BVV0102_012088 + 0 NULL GK000027.2:38084142-38386791 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21761 AGAGAGTCTGTGTCTGCTGCATTGTGTTGGCATACTTCAGTGGGGGTGTGACTTCAATGG Gene GeneID:787386|LOC787386:XM_002698775:7_cdna Constitutive 0 NULL GeneID:787386 28 GENE LOC787386 NULL similar to Olfactory receptor 5AS1 (Olfactory receptor OR11-168) EMBV3_42482 TCAGATGTGAAGCAGCGTGGATTTATGGGATCAGGTGGCAGTGGCTGATGTTTGCCCCTA Gene GeneID:506599|C16H1ORF26:NM_001101873:39_cdna UTR3_Alt 2 NULL GeneID:506599 16 GENE C16H1ORF26 MGC152609 chromosome 1 open reading frame 26 ortholog EMBV3_16796 CTGCTGCTTTTGGAAGGAATGCTCTATGAATATCAGTGAAACCCACCCAGTCTCATGTCA Gene BVT0101_000843 - 1 EMBV3_28609 GK000007.2:64223082-64233813 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36554 CAAGAGCTTCCCCCATGGCTTGATCCAGACACATTCATATAAGGGGCTCTCATTACTTTG Gene BVV0101_088444 + 0 NULL GK000014.2:37760223-37990750 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10448 TAATAAGTGTTGCACTGGTTCAAGGTCGGGCATTGGGTGGAGGAGCAGAAGTTACTACAG Gene GeneID:536284|ECHDC1:NM_001035415:59_cdna UTR3_Alt 2 NULL GeneID:536284 9 GENE ECHDC1 MGC129066 enoyl Coenzyme A hydratase domain containing 1 EMBV3_38245 ACTCGGCCAAGAAAAGTAATGATTCTCCTTGTAAGTACCAGAGTGTGTTCCTTCGAGAAC Gene GeneID:535653|ESD:NM_001076065:163_cdna UTR3_Alt 3 NULL GeneID:535653 12 GENE ESD MGC139609 esterase D/formylglutathione hydrolase EMBV3_07635 TCTGAAGCATCTGGCCCCAAGGGTTTCAAGACTAGATTGGGTGCCTTCAAGATGGTATGG Gene GeneID:281073|CHUK:NM_174021:21_cdna Constitutive 0 NULL GeneID:281073 26 GENE CHUK NULL conserved helix-loop-helix ubiquitous kinase EMBV3_02942 GGACTCCACAGCAGGTTCAGGCTTTGCTAAGTTCTAAGGGAACAGAACGATATTGCCCCC Gene BVV0102_378907 + 0 NULL GK000017.2:69478075-69527038 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29764 GAGGACGCCATGAGCAGCACACACCTGCCCTCTCAGCTCCAGGAAAGCCTCAGCAATAAA Gene GeneID:513873|NDOR1:NM_001046158:68_cdna Constitutive 0 NULL GeneID:513873 11 GENE NDOR1 MGC137408 NADPH dependent diflavin oxidoreductase 1 EMBV3_26477 TTGTGCAAATGTACAGGTCTGGTAGTAGGCTCTTGGGTGATTGGGGTCATGCACTCGTTG Gene GeneID:784778|LOC784778:XM_002690684:287_cdna Constitutive 0 NULL GeneID:784778 10 GENE LOC784778 NULL similar to olfactory receptor 727 EMBV3_13333 CCACAAAGTGAGACTTAGCTCTGGGGTTTCCGTCATCTGTAAGTTAGGGACGATAACATT Gene GeneID:518121|CDC42BPG:NM_001102502:30_cdna Constitutive 2 NULL GeneID:518121 29 GENE CDC42BPG MGC155045 CDC42 binding protein kinase gamma (DMPK-like) EMBV3_01393 CAAATTCAGTAGGTCCACAGCCAAAATCCAATGCCACCAGAAAATCCTGTTACCTCCAAC Gene BVT0101_021194 + 0 NULL GK000007.2:82984874-83024152 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217820 TCONS_00217826 TCONS_00214354 TCONS_00217821 TCONS_00217825 TCONS_00214353 TCONS_00217824 TCONS_00217822 TCONS_00217823 TCONS_00214355 2 XLOC_131587 XLOC_130670 Coding TCONS_00214353 XLOC_130670 NonCoding NonCoding DHFR 7:83021961-83024240 x TSS160352 1479 2 TCONS_00214353_1 66 0.548343475321163 3 0.35206321334504 0.000308322286909191 0.000901434599603977 0.00129112080012349 0.00124899550215149 6.89745123334489e-05 0.000140045350178123 0.000347641701645079 0.000489023939855975 0.00021790129161061 2.2539978959374e-37 1.92365373865364e-05 1.26276198768656e-23 8.08456422204329e-105 1.33268110181202e-170 1.77898341131033e-78 0.000178632111107865 1.13227364911341e-47 1.20089021774775e-26 0.000266207083479543 0.000869592862768359 3.99500852066998e-30 7.01568831888837e-42 1.39675014713911e-24 1.82778818113944e-58 7.59490780880649e-15 0.00102033230655667 0.00129509798442811 7.23686798766612e-48 2.37849143695865e-20 8.40413998685995e-05 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 1e-84 318 90.60 0.155510480054091 0 noncoding 0 0 0 0 -0.690198589814884 0.0214244426638944 NA NA GGCTTGCTTGGCAACAAAACCATGCAACAGAAGCAGAAGACATGCCCCCAAACAACAAAACAACAGGGGCTTGAGACCCACATCCTGCCATTAGACTACATTTCCCAGGCTTCTTGCAGTTGGATGCGGTTATCTGACAAAGTTTTGGTCAGTGGATTGTGGAAGAAAGTCACGTGTAACCAGTTCCCGGACTGCCCTCGCGGCCAGACCTCCCACAAGTGATCCTCCGTGCTTTTTCCTTTTTGGCAACAGTCCTGGAAATGCCTAGTCGAAGACAGACACCGCAAGGTGGAATGAACCTGGCTCCCTTTATCACCACCTGGAGAGCTACCTGCTGACCGGAAACACCTGTGTTGGACTTCATCTGCGCAATAAACTTCCATGTGTTAAGTCATTGTGATTAGGGTTTCATCTGCTAAAGCAGTGAATTCTCAATCAACATGGTATTTCAAATTCAGTAGGTCCACAGCCAAAATCCAATGCCACCAGAAAATCCTGTTACCTCCAACTTTTTAATCTACCCTGAATCAAATTTTTAACTGCACCTGATTCTCTAGTCTGAATTACCATCATTCCTCTCCTGAACCTGTAATTGGTCTTTATGCTTCTATGTATTTTAAAATTGTAAAATACTTTAAACTATCTGTGTCTTTATACTTTTTACTATATAAAGAAGTATGAAATTGTACATAATCATAAACATGGAATTGTTTTAAGTGTTTACATTTGCTGGTCCTGAGCATGTCATATTTTGGCCACCTGATGTGAAGAACTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCGGGAGAAGGGGACAACAGAGGATGAGATGGTTGGATGGCATCACTGACGCAATGGACATGAGTTTAAGTAAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGAGTGCTGCAGTCCATGGGGTCACAAAGAATTGGACACGAATGAGCGACTGAACTGAGTGTGTCAGCAGCCTCTTACTGCAAACACCTGGGGCTCTGTCTAGTCATTGGTGTGTTCAGTCACACATAGGTTGGGGGGTGACAACCCTGGGAGTAGCCCCCATCAATGGGTGGGGGATAAATACTCCAGCTTTCCTCCCCTCCATTTCCCAGATATTTCAGCAGTACTGAGTTTGTAACCCAATGGGAACTTGCTCACTGACCTTGAACTGGCCTTCTTACCTTCCCAGTTTGACTTTTCCACGTACCAACTGATGCTTTCTGGTATCATCTATCAAATAAATTGGTATTACTGAGAACACCACATCTGATGTGTGTGGATGGTACCCTGCTGTAGCTTTAATTTGCATTTCTCCAATTAGGCAGGGACATTTTGGTCATTTGAGTTTCCTCTTCTCTAATTGGCTTCCTTCTTTTTCGTGTCAGTATCTAAGACCTATAAACTCTGGACACTAATAGTTTTCTGGTTATGTTCCTTGCAGAGAGTACCACTGTTTTCGT TCONS_00217826 TCONS_00217827 r 5' 0 TCONS_00217820 TCONS_00217821 TCONS_00217823 TCONS_00217824 TCONS_00217825 TCONS_00217826 TCONS_00217822 r 3' 662 EMBV3_19580 ATTTTCTGGAGAAACAGACATTTCTGAGAACGAGGAGAATGCCCCCTCACTGGGGTTGCC Gene GeneID:511926|MRPL54:NM_001035105:15_cdna Constitutive 1 NULL GeneID:511926 7 GENE MRPL54 MGC128589 mitochondrial ribosomal protein L54 EMBV3_24611 CCTTACGGATTCAGACTTGACCCATCTGTCCCAATGCTGAGCGCCTCTCAGTTCTGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05365 TGCAGTCCAGAACCTTGCAGGATCAGCAAAGCCAAGAATCATTATTAGTGCCGACGGGGA Gene GeneID:515385|FABP9:XM_002692714:140_cdna Constitutive 0 NULL GeneID:515385 14 GENE FABP9 NULL fatty acid binding protein 9, testis EMBV3_08645 AAGCTTCTAACCAAGGAAGAACTTGAAGGACTGGGAGACTTGGTCCCCTTGTCTATGGGG Gene BVT0102_380566 + 0 NULL GK000012.2:15614507-15631719 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034608 TCONS_00034607 TCONS_00034605 1 XLOC_020717 Coding TCONS_00034607 XLOC_020717 Coding Coding COG3 12:15610784-15692464 j TSS25535 7890 1 TCONS_00034607_11 570 0.0732572877059569 25 0.903708419544803 0.00097061766824514 0.00106495529712798 0.00111947806780149 9.88045070926312e-05 0.000410704167771099 0.000393601286082848 0.000670296811754111 0.000682238714223346 0.000827387780996114 0.000248065473802308 0.000548274448263954 0.000143993125107965 8.9666077988821e-05 0.000282586295754867 0.000145240182891406 0.00611123789313518 0.00237307809680878 0.00417978703771168 0.00124289511229489 0.000405286231911527 0.000187878832845175 0.00173679903451573 0.000873338896221327 0.00156990915509262 0.000890041117737219 0.000804804759963256 0.000408938797692214 0.000384437814384766 5.16538960020032e-05 0.00039987496091051 NM_001206537.1 COG3 Bos taurus component of oligomeric golgi complex 3 (COG3), mRNA. 0.0 4848 99.85 0.341951837769328 NM_031431.3 COG3 Homo sapiens component of oligomeric golgi complex 3 (COG3), mRNA. 0.0 2302 79.25 0.34233206590621 TCONS_00034607_11 sp|Q96JB2|COG3_HUMAN COG3_HUMAN Conserved oligomeric Golgi complex subunit 3; 0.0 1090 88.94 0.998245614035088 0 coding 1 1 1 1 -0.0433797962025642 0.874719227889841 -0.00931092676607915 0.892250585439998 GGCTGAAGAAACTGGATTTGTGACAATCAAGCCTGCATGAGACATCCTCTGAAAACGCTCACTTCTGAAATAGCGAAGCCTCCTGTCTTTCCCACTGCTTCTCACTGCTTGGCCTGCCACAGATTAAGGTGTGAGCGAGCAACAGGTGAGGGCTGGGTTAGCTTGGATCGCTGTGCCCCGGCATCGGATACTCTGCACCAAATGTTAACGGCCTCGACTGTAACATCTAGACACTAGTCCTTACCATTCAAGTGCCCTTCGACGTCAAAGATAACAGGAAGTGCATGTTTCTTGCTAAAGAAAACTTGCATGAAGGTCAGGAACTGTGAACCATTTCCTTCAGGCGAAGAATAACTCCTGGAGCACCTCAGCTCATAGCCAAGACTCCCAGACTGTTCTGAAGAAGCTCTTTGGAACCGTGGGACGGAACGTCTCAGACGGTGTTACTGTTCCTGAGCTTTTGGGGGGCTTTGGCTTCGTGTCTGCTGAAGAAATTCACACATGGAGATGTGATGTACCCCAAGTATAAACAGGGCGGGTTAGAGATCGCTGGAACATTGCACTGCTTTGTAATTTCCTATTTTGGCAGGATCTTTCACTTATAATAAGTGACTTTTAAGCCTTTCACCACCCTTTGTGAGGAATTGTTACAAAGTATTACCATCTGAACTCATGATGGTGTGAGAGGTTGGCTTGGGAGGTAGCAAAGTCTGTGTTGTGGGAGGTGTGTTTAAGCAACTTGGGTTCTGTCCTAGCTAATGGTAGTACTGGGTTGGCCAGAACCTTTGCTCAGGTCGTAAGAGCGTGGGGAAAATCCGAACAAACTTTTTGGCCAAGTCAATAATTTGTGATATTAGCAAAGTTTCTGTGTCCCAGTCTGTACAATGGGGATAATAACATGTATTGATACTGAGTGTCAGGTGAAGAAAACAGTAGCTCCTACTACTGGCCTTGTAGCATAAGTGTCTTTACATCATGATGTCGTATAGCCATAATTCCAAAATAAATAGTTCCTGTGTGTGAAGAGAGTCGTTTTATCGTGAACTTCTCCCAAGGGAGGTCCTGTGATAAAACTCTTGTGAAAGAAAGAGGCTAACGTTCTGTTGTTTCCCTTAGTGAAATGTAGCAAGTTAATCGAAAAGTTGATTTTTTCAGATTTCCCAGGTTTTACTTTAGTTTTGGTCATGTTTGTTAAAATATTTCCTGTCTTGGATTTCCTTATCAGTTTGGATGGAAAATCCTTGCTTGAAATTTGAAAAGCAATATTTTTGTATACCTAGAGTCTGATAAGAGGTATATAATAGCTTCCTTCTTTTCTTCTAAAGACAGGATATCATTCTTCTTTCTCGTCTTTTATCTTACTCTTTTCAAAATAAAAAGTGACTCTGAGAGAGTCCCAGGACCTTTATACTTCTAGAAGACATCCCTAGAAAAGGAAATATATTCAGCATTCACTTGGGTAGCGTTGGTTCTACCCTTAGAGTGTGCTCAGTCATGTCCAACTCTTAACTACCCCATGGACTGTATCCTGCCAGGCTCCTCTGTCCGTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCAGGGGATCCCCCCGACCCAGGGGTCGAACCTGTGTCTCTTGTGTTGGCAGGCAGATTCTTGACTGCTGCGCCACCTGGGAAGCCCTGTGAGAGTACCAGTAAATACGTCCTCCCTGGGGCTCCAGGACAGTCACCTCTGCCATATATGCAGGTTCCCAGTCCGTCCAGCCCCTGGACTGCTTCCTCCTTCAAAGCAGAATAGAAGGCACGCAGATTTTTCTTGGGGATTGGGCAGTTTTTCCTCCCTGTCTCTCTCACCTTGCCTTCTATATTAATGCTGACTTTGAAAATAAGATTTTGTGAAGCAGGATTTCTGTTCCAAAAGGAAGAGCTAAGGCAAGAAAGGAGGCGGTCAGAGGGGCAGGTAGGTGTTGATTGCTTCAAGATTCAGATGGAAGTCTAGTTCTCGCTGACCAGCTCCAGATGTGATACTAGAGAGCTGAGCCCCTTCAGACCTCGTCCCTCGTACTAAACCATATCTTTAGAGAGGAGACTTCTCTTCTTACCAGAACATTCCATTGATGTAAGGGCTTTCTATAGAAAGGCTTTCACTTTTGGGCTCCTTGAGTTTAAAGGATGACTTTTTATGAGCCACTCTTTGTTTTTCTCCCTTAATGTAGAAAACATTGTAAGTATACATATAATTCCTAAAACAGTAGAAGCGAGTTCATTTTGAAGACCATGAACAGATTGAATGTCACGTAATATTTATTATATCAGTTTATTCAAATATGTACATGTTCATACCAGGATGAAAAGAAAACCAAACCCCTCTGTAAAAGGTAAGCACATTTTAAAGACATGTATTTCTTCAGTGCAGACTTATTATAAATACCTTATAGAACAGAGTCTTAACCTGTTTTGATTTTTTTTTTCCCTGTTCCCTGAAAGAGTTATGCAGTTACTGAAGCTTCTAACCAAGGAAGAACTTGAAGGACTGGGAGACTTGGTCCCCTTGTCTATGGGGCTATGAATATAAGTTCCCTCCCTCCACTCCCTTGGATATTGTTAAATGTAGCGAAGGGATTTTTAGCTTTTATAACCCAAATGAAGAAAGTGGATTTTTTTGTTTGTTTGTTTGCTTGTGGATTGGTGTAATCATTGATGGCTAAGTTTGGCTGATTGTGATATAAAGAACGGCTTCTGTTTTCTGTATTTATTCATGCACCAGAAATAGTGTATATTATTATATAAAGACTATAAATGTTTTCATAAGCCTTTATATTTTGAGCTCTTTATTTAAACATTGTTGGAAAATGTGGCATAAACCTTGTGTCATTATTTAATAAACTGTGGTAATATATAATAATAAAAATGATTTGTGGTTATTTCAGATGCATAGAAACATTTGAACAAAAACAAGCTCTGAAACGTCCAGGAAGCTGGAGTAGATCTGGCGTCCATGAAGCGGCTGCAGACATTTCTCTCTGCTTAGAGAAGTTGTCGAGATCATCTTACTAATTGCCTGGAGACATGTGTGGCCTCCCAGTCTGCAGCTCCGCAGAGGCCAGTGAATTTGGCTCATTGGGTTTGCTGGGCAAGGCAGCTTTGAGATAATGGAACACAGAGACCCTTCACAGAGACTCAAGCAAGAAGCAACCTGAAGTTCTTCTCTAAGAGTGATGAAAGAGGACTTCCTTGGTCCAGTGGTTAAGAATCTGCCTGCCAATGCAGGCGGCACGGGTTTGATCCCCGGTCAGGGAAGATTCCACGTGCCACGGGGCAACTGAGCCTGTGTGCCACAACTCCTGTGCCTGAGCTCTAGAGCCCGCAAGCTGCAGCTCCTGAAGCCCTTGTGCCAAGAGCCTGTGCTCTGCAACTAAAGAAGCCGTTGCAGTGAGAAACCTGCCTGCCGCAACTAAAGAAAGCCCAGCTGAAGCAAGAAAGACCCAGCATAGCCAAAAATAATAAATACTTTTTTAAAAAGAGCGATAGAAGAGACTGTGGAGTTTGAATCAGGCCTGGAAAGGGTCCAGCAATTTGGTTATGACTACAAATGGCTGAGTGCTCCTCCGTTCTCAACCAGGGAGGTCTTTTCTGCATCCTGGGTGAGATCCAGCCTACCTTGTACTTCCCCTTGTTAAAGGATGATTTTCAGGAAAATGTAAAAGCATGATTCGTACAAATATAAATTAATGAAACGAAAGGAGTGAAACAGGGAAGAAGTCTCAAAAAATGTCCAAGCAAATTAAAAATATAGCCAGATTTTTAGAAAACTACAATATTTTGGAAATCTTTATGACTGAAGAACATCATTGGACTTAAATAGCTCCCTATTGAAGATTTATGCAGTTTACCCTCCCAGTCACTGCCCATTGCACAGACTTCAGTGGTGCCCGAATCTACAGAAGACATTCTCTTGAAGGGATTCACGTCCTTAGAAATGGAAGAAGAAAGAATCGAAACTGCACAGCAGTTTTTCTCATGGTTTGCAAAGCTACAAACTCAGATGGATCAGGACGAAGGAACTAAATATAGACAGGAACCCTACATGAAGCCTGTGAACAGCTCCTGAAAGAGCAGTCGGAACTTGTTGATCTGGCTGAAAACATTCAACAAAAACTTTCCTATTTTAATGAATTGGAAACTATTAACACAAAATTGAATTCTCCCACGTTGTCTGTGAATAGTGAAGGATTTATACCTATGCTGGCCAAGTTAGATGATTGTATAACGTACATATCATCTCATCCGAATTTTAAAGATTATCCTGTATATTTACTGAAGTTTAAGCAGTGTCTTTCTAAAGCTTTGCACCTCATGAAGACATACACTGTGAACACACTACAGAACCTCACAAATCAGTTATTAAAAAGGGATCCTTCATCTGTACCTAATGCAGACAATGCCTTTACACTATTTTATGTGAAATTTCGAGCTGCTGCCCCCAAAGTCAGAACTCTCATTGAACAGATAGAACAACGATCTGAAAAAATACCTGAATACCAACAACTGCTAACTGACATCCACCAGTGTTACCTGGATCAGCGGGAACTCCTTTTGGGCCCCAGTATTACTTGCACTGTAACAGAGTTGACCAGCCAGAATAACAGAGACCACTGCGCCTTGATTCGCAGTGGCTGTGCCTTTATGGTTCATGTGTGCCAGGATGAGCACCAGCTTTACAATGAGTTTTTCACAAAACCAACGTCAAAATTAGATGAACTTTTGGAGAAACTGTGTGTGTCGTTGTATGATGTCTTCAGGCCATTGATCATTCATGTTATTCACTTAGAAACTCTCTCGGAACTTTGTGGGATTCTTAAAAATGAGGTGCTTGAAGATCATGTACAGAATAATGCTGAACAGCTGGGGGCATTTGCAGCTGGCGTAAAGCAGATGCTAGAAGATGTACAGGAGCGGCTTGTCTACCGGACCCACATCTACATTCAGACGGACATCACGGGCTACAAACCAGCTCCTGGAGATCTAGCGTATCCTGATAAGTTAGTTATGATGGAGCAAATTGCTCAGAGTTTAAAAGATGAACAGAAGAAGTTATCACCTTCAGAAGCTTCGTTTTCAGATGTTCGGTTAGAAGAAGCAGAGCCTCCTAATAGTCTAACAAAATCTGGTCCAGTTCTAACTCTTAGGGCAGTGTTCCAAGGACTATCACAGGAAGCCTTGTCGGCCTGCATTCAGTCACTGCTTGGAGCATCAGAGTCCATCAGCAAAAACAAGACTCAGATTGATGGACAGCTTTTCTTAATAAAGCACCTTTTGATTCTTCGTGAACAAATCGCTCCATTTCACACTGAATTCACCATTAAGGAAATTTCCCTGGACCTCAAGAAAACTAGAGATGCAGCATTTAAAATCCTGAATCCTATGACTGTTCCAAGATTTTTTAGGCTGAATAGCAACAATGCCTTGATAGAGTTCTTGTTGGAGGGTACTCCTGAGATAAGAGAACATTACCTCGACTCTAAAAAAGACGTAGACCGCCACCTGAAGTCAGCCTGTGAGCAGTTTATTCAGCAGCAGACCAGGCTGTTCATAGAGCCGCTGGAGGAGTTCCTGACAAAGGTTTCAGCATTAAAAACAATGGCCAGTCAGGGAGGACCTAAATATACGCTGTCTCAGCAGCCTTGGGCACAACCAGCAAAGGTCAGTGACCTTGTGGCAAGTGCCTACAAGACGATAAAAGCAAAGCTGCCCCTGACATTGAGAAGTATGTCCTTGTACCTATCCAACAAGGATACGGAGTTCATCCTGTTTAAACCAGTCAGGAATAATATTCAGCAAGTCTTCCAGAAGTTCCACGTCTTGTTAAAGGAAGAGTTTAGCCCTGAAGATGTTCAAATCATTGCTTGTCCTTCAATGGAACAGCTGAACCTCCTACTGTCCGTTTCTAAATAACTTGGCCCATTGGGCTGTGCGTATGGATGGCCAGCTGGCAGGAACGGGCTGCCAGGTCCAGAGGCTGCAGGACACCGGGGAATTGGACGAGGGACGTCCCCAGAACCACACGGCCGCCGCTCAGGGCTGAGCACAGAACGAAATGGAAGCAAAGTGGCAATGATTTGTGTTTCCCTTTTAAAAACATCAAAATGCCAAAGATAAGCTATATAGTCTATGAGCGCTGATAACTGCCTCACTTAAATGGTCACAAGCAGTGTAAGTTTTTAAGGGGAGAAACTTGTGGCGGGCACACAGGGAAATGGTTCTTAAGAAAGATGCGGTGAAAATAGGTTACAGTAAATACCGCAAAGAGCTTTACGGAAATACAGCTAATTAGGAAACTTCTGAGAGTAAGGTTTGTTAGAGCAAGAAACACTGCAGTCCTTTTAACCACTGAGCATTCCACAGTACTATTTTTTTTTTTTTTTTTTACTTCCAGAAATGTTATTTCTACACTCTATTTATAATGTTTCTCCTCTCGCTTTGAAGTTTAGTTTGGAGTAGATTGGCTGCTTCTGAGACGTCCTGCTTTCCAGGGGATTCAGGGTGTTCTCTTTCTGCGTGTTTGATGTGAGGTAGTTTCAAAATGCAAGGGCCTCGTGTAAGGTCCCAGAACCTGTACTGTGAATGGCTTTGGTACAGAGCATTCAGAGCAGGCCGGGGCTGCAGCCTCCTTGTGGTGGATACATGCGTATCTTTAATGAGAATCTTCATGGTACAGTGGGCAGTGTTTGTGAGGGGGAGGTACCAATTAGGGCATCTTTAGGCTGCCACACTGAGGCGGCCAGGAAGCCTGATGAATAGCAGGTTGCATGCACGATGCTTAGGGTTACCAGCTTTCTGCACATTGCCTTCCATTTCCGTAGTTCTTTGAAAAGCGAGCACTTTTTATGTCCCGAACATTCACAGCGGCTGTGCCGCGGGCCAGCCTTGTGAATCTGCAGCCTGCAACAGCAGAATACAGTTTACTTACAAACTGGTGAAGACCTCCCATGCCTTGAAATGGACTGCCTGATATCAGGGATCATCAGATTAATCACGCACATCTCTTGAGTTTGCCTACAAATACCTGTTTCCTGATTGAATTGGTTTTGCCTCTGATGTTACAGTAAATGTCACCTGCTTTTTGGTTCACAGTGAATTTTGAGTTACTCAGACACTAGTTTAGAGATAGAACGCTAACAAGGGCTCTGGAACATAGCCAGCAGACCGCACTCTGTGAGACTGTATTCTTCATCCACTTCAAGTAGACTCCCGCCTTCATGCGGACAGTTTACACACCCCGATGTCTGTCATTTTAAAGGGTCACTTGCTTTTCACCTCAGTGTAACTTGGTGATGGATGTTGCTTGATAGACCTTAGTACTCTGTATATTTTGGGAAGGTAGAAGGTAAAGAGGGGCCATATTCATTCTTTGATAGGAAATGAATGAATTAGGAAGATTCTACTCACTTCTACTTACTATTTTAAATATGTGTTTAATGAAATAAACTGTAAAATATCCAGTTTTGTATATTATATGTACATTTGATTTTTAAATAGCCTTTCCAAAGAAATGAGGGCATGATTATTGTACAGTACTATGGCTGATTTCATTTGATGTACAGAGCAGAGGATGTTCTTCAGGATAAAAATATTTGATGGCACTCATTCTTGTGCTTTGAATCTTTTATTTCTGAAACACTCAAACACCTTACTGAGTAGGTAATAGCGATCCAACCTGTTTGCTAAATGACTGTTTGTTTAAATCTGTACAGTTTAAAGTGTTCACTTATACAAAGAGTGTACATACTTTCAAATAATTAATTTAAAATGCTTTATATTATTTGGCTAGAAATTGCTGTTTTAATAAATGTGAATTTTTTCACAAATAAAGATTTTTGCTTCCTACT EMBV3_14774 GCCCGCAACAGCCTCCTTCCCCTCGGCCTGAAACAAAGTAATGATAACCTAACACCAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23523 CCAAATTCAGAGGCAAAAATTGCTCTCCATAACTTTGAATCAGTGGATCTACAATACACT Gene BVV0101_033762 - 1 EMBV3_08414 GK000002.2:120279664-120311156 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28822 GTTATCAGAGCCTTGACCAGTTATCAGCTGAGGTTAGCCTTTCTCAGACTTCACTGGATC Gene GeneID:525116|RUNDC3B:NM_001076874:26_cdna UTR3_Alt 4 NULL GeneID:525116 4 GENE RUNDC3B MGC139450 RUN domain containing 3B EMBV3_06359 GGGAGGGAGGCAGGCTTGGGAGAAGAGACTGTTGGACTTGGAATATTTAATTCAGGTTTT Gene GeneID:515025|BIN2:NM_001083435:74_cdna Constitutive 0 NULL GeneID:515025 5 GENE BIN2 MGC140312 bridging integrator 2 EMBV3_18969 AGTCACTTAAACCCTTGACAAACTTAGAGAAAAATCTTCCATCTGTATATAGTATATACT Gene GeneID:281662|CAPN2:NM_001103086:2_cdna Constitutive 2 NULL GeneID:281662 16 GENE CAPN2 MGC138930 calpain 2, (m/II) large subunit EMBV3_22664 TACAGCTCACTGACCCAGACTGATGAGACTGGAGGAAAAGATAGCTGATCTCTCGTGGAG Gene GeneID:525558|KLF8:XM_002700142:4_cdna Constitutive 0 NULL GeneID:525558 X GENE KLF8 NULL Kruppel-like factor 8 EMBV3_11470 CACACTCTGGGGCCTACTGGTGTGAAGCAGCCACTGAGGACAATCAAGTTTGGAAACAGA Gene GeneID:782871|FCRLA:XM_002685849:385_cdna Constitutive 0 NULL GeneID:782871 3 GENE FCRLA NULL Fc receptor-like A EMBV3_42262 TGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTACCGACC Gene BVV0102_137796 - 1 EMBV3_23729 GK000027.2:5104397-5124192 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16738 GCACATGTATACATTTTTTCATTGCAGCATAATTGAGGAAGTATTAAGCCAAAGGTTCAG Gene GeneID:540274|RNF14:NM_001081540:29_cdna Constitutive 3 NULL GeneID:540274 7 GENE RNF14 MGC155209 ring finger protein 14 EMBV3_38631 TTAAAGTGCCTAATGTACCCCCCAGAGCATGGCTTACCTTCAGGGACAATCACCCAGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15177 GAGAGGTGATGTGGGAGAGACATCCCAAGGATTTATTAGCATCTGCCCGGCCTTGGTGTT Gene GeneID:789634|TOR3A:NM_001080376:260_cdna Constitutive 0 NULL GeneID:789634 16 GENE TOR3A MGC155214 torsin family 3, member A EMBV3_13350 ATTGGACTAGGTGGGCAGCACAGGGATTAAGAGCACCCCTGTTGTAGCCTCAGTTCTGAA Gene BVV0101_065865 - 1 EMBV3_21688 GK000010.2:70098698-70145553 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26728 GCCAGGCTCTTCTGTCCATAGGATTTTCCAGGCAGGAATCACTGGAATGGGTTTGCCATT Gene GeneID:506176|TIPIN:NM_001105336:71_cdna Constitutive 1 NULL GeneID:506176 10 GENE TIPIN MGC127806 TIMELESS interacting protein EMBV3_27051 TAGACCCTCACCTTGCCAAACAGTGTCCCCTATTATTAACATCTTGCATTAGTGTGGTTC Gene BVV0102_124024 + 1 EMBV3_23745 GK000004.2:58083704-58723589 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14869 CCCATCATAGGCTCTGCATATCACTTGTACCCAGTGTGGACTGAGAAGCGTTACTTTGTA Gene GeneID:282354|SLC1A3:NM_174600:12_cdna UTR3_Alt 2 NULL GeneID:282354 20 GENE SLC1A3 MGC140731 solute carrier family 1 (glial high affinity glutamate transporter), member 3 EMBV3_37897 GACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACAGTGGGGGCTTTCACTCTCTGTA Gene GeneID:541239|C26H10ORF6:NM_001102259:216_cdna Constitutive 0 NULL GeneID:541239 26 GENE C26H10ORF6 MGC152405 chromosome 10 open reading frame 6 ortholog EMBV3_27482 TGCGGCCTTACTGGGCTTCCCATCAGATGGGCCCCAGCTTCTGGAAGCCATTGCCCACTT Variant GeneID:509781|FASTK:NM_001035077:610_cdna 595^834 2 EMBV3_19163 GeneID:509781 4 GENE FASTK MGC137976 Fas-activated serine/threonine kinase EMBV3_17788 TCCTCCGCTGGTTTCTGCTTCTCATTCCTGTGACTTCAAGAGCACAGTCCCTGGAGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42442 CAGACTACTCTTGGAAGTCAGGAGAAAAATATAAGAAATCCACTTATTCTGGATCACGTG Gene GeneID:512635|TTC14:NM_001101960:19_cdna Constitutive 3 NULL GeneID:512635 1 GENE TTC14 MGC143168 tetratricopeptide repeat domain 14 EMBV3_20522 TGTGTGGGATGAGAGCCTCCTGGACAAGCTTCGCGCTGCACTGGATCAGCAGCTTACTGA Gene GeneID:781424|LOC781424:XM_002689510:119_cdna Constitutive 0 NULL GeneID:781424 8 GENE LOC781424 NULL similar to interferon alpha F EMBV3_17752 ATTGCTTGGTGGTCCACACCTGTGCTATGGGCATGTCTGTGATCTAGGAACCAAAAGCTG Gene BVT0102_038323 + 0 NULL GK000009.2:46187169-47224236 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00240518 1 XLOC_147182 NonCoding TCONS_00240518 XLOC_147182 NonCoding NonCoding - 9:46784898-46785427 - TSS180196 529 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.71888005420702e-05 0 0 0 0 0 0.000279686961790771 2.21517243591011e-05 0 0 0 0 noncoding 0 0 0 0 -0.38493442666221 0.213704447838147 0.0366360439554628 0.450952902968275 TTTTTGACCTGGTACAGCGCATAAGTGGAAAAAAGACTTTGCACTACCTCGGGAAAACCAGCCTATCTTTATGTGCAATTACTCTAAGTGATGGCTTCTCAGGTGCTATGAATTTTTCAGCCTGCCTACAATAGTCATGGGTTGTTTAAAGCCTTACTGCCAATGATTAGGGCCATTCTCCAGAAACAATATTGACTATGATTCTTCCAGAAGCAATGGGGAATGACAGTTAACAACTAATTGTATTTAATAAGAGCTCCATTTTAAGAGGGAAAATAAATCAGGAATCATTAAATTATCATTACTAATACTATTGCTTGGTGGTCCACACCTGTGCTATGGGCATGTCTGTGATCTAGGAACCAAAAGCTGTATGTTAAATTACTGTTACCATTATAAAATCCTCCTGAGGAAATAAACAGTTCTGATTCTGCTGAGAAATATGCATTTACAGTTAGGTAGTTAAAGTTGAGATGAAGAGAGGTAATATGGCTCATCTACAAAATGTGGAAGAACATGTATGTCACAG TCONS_00237329 . 3' 438825 TCONS_00237329 . 3' 439353 EMBV3_39078 AGCCAATCAAGATGCAGCTCTGTTCTAACCTGGAAAATTATACGGAGGGACTTGGGCGGG Gene BVT0102_348860 + 1 EMBV3_01077 GK000013.2:32644377-32666583 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042478 TCONS_00042481 TCONS_00042472 TCONS_00042473 TCONS_00042479 TCONS_00042474 TCONS_00042477 TCONS_00042480 TCONS_00042476 TCONS_00042475 TCONS_00042482 1 XLOC_025674 Coding TCONS_00042480 XLOC_025674 Coding Coding SLC39A12 13:32664940-32704448 j TSS31603 2243 1 TCONS_00042480_7 353 11 0.943503682891639 0.00253182393857012 5.12659647694552e-07 0.00145138160585931 0.000228057604063758 0.000275414644864259 1.20584746873216e-152 0.000506408969391313 0.000707998864726593 0.00059072644248934 0.000438795913787964 9.18590160478102e-22 2.45416946549254e-05 0.000401378219929224 1.84731062890019e-17 7.7752907369418e-27 2.44451272525994e-40 0 2.68260770791396e-53 0.00364529907677249 0.00049723617914455 0.000363276777067377 0 8.17689242058858e-06 0 0.00202066583148765 0.00217554921732875 0.00114368034083484 4.68020865921491e-59 6.03837739389882e-08 5.35901020947222e-06 XM_005214202.1 zinc transporter PREDICTED: Bos taurus solute carrier family 39 (zinc transporter), 0.0 2659 100.00 0.656709763709318 NM_001282734.1 zinc transporter Homo sapiens solute carrier family 39 (zinc transporter), member 12 0.0 994 86.29 0.373606776638431 TCONS_00042480_7 sp|Q08E40|S39AC_BOVIN S39AC_BOVIN Zinc transporter ZIP12; 0.0 570 100.00 0.787535410764873 0 coding 1 1 1 1 0.0576630263598018 0.686706954852279 -0.0237948908345476 0.751674328231674 ACACAGGACTTCAGGCTGGATATCCATCTGGGAATCCGGAGAAAGATCTCAAAGTTCCAGCAGAGGGCGCTCTCCCAGGACCACTTCATAGCCAATCAAGATGCAGCTCTGTTCTAACCTGGAAAATTATACGGAGGGACTTGGGCGGGGAGGGCCGATCTGGGAACCTGATGATTGGAAGTGGGCCAGGAAGCAAGGGCTTAATTCCAGAAATAAGGCAGAGCTGAAGTTATGAAAAGCAGCAGGTGACAAGAGGACTGGATAATTCGCTCAGTAGACTTTGGGCTACTTAGTTACCAGCTCCCTGGGTCCCTGAGACTGAGATGGGACAGAGCCTACAAATGATGCTCAGGTGGTTCCAGCTGCTGAGTGGGCAGCAGGTCGGGAGCAGGAGCTTGCTGAGAACTTTGCCCAAGGTGCCTTCTCTGGTCCTGAGTCCATTTCCTGTTCTGCATCCACCTCCACGGCTGTCATTTATTCCCTAATAAGTTAGCGAGAGCTCGTTTCACAGCACCGGAGGGCATGATGTAATTACTTCTAACACAGAATCTGAGATCAGAATATACACAGCTAATTAAAGTTTCCCACTTAAGTCCCAGATCTTTGGTTTGAGTGTGGATAAAGCAGTTATCACAAAATCATCTGAGAAATAAAAGAAATCTTGATTTAACATGAAAACCTTTCCATTGTCAACTGAAAACTTTTCTGGGCTGAAATAATCCTCTCTAGCTCCCAGCGCACAGTCAAGGAATTTTAAAAACAGAGGACTTTGTAACCACGAAATACCCTCCAAGATTTAAAAGGCCACAGAGCTCCAGATAAATAATCATTTATCTTTCTTCTGAAGCTACAAGTTGACACCGTGAACACCAACCCATCCTCCTCCATCAGAGCAGACTCGGGGTAGAGGAAGAGTGGAGATGTGCTTCTGGACAAAGCCTTCTGTATCCTGGGTGTCCTTGTTCCTTCTACTCAGCCTTGATCCCTCAACTGAGACAGAAAAACCCTCAACTCAGGACAGCAGCAGCACTTGGAGTCCAGGGCAACTGACGGAAGTTCTACGGGTTCTCTCTGCTGATGACCCCCGTCCCCTGAACCACTCAAGAAGCCTCATCAGAACATTGCTGGAGAAAACTGGGTGCCCTCGGAGGACAGATGGAAGGCAAGGAGACTGCAATCTGAAATGTCCAGTACCAACCCTGTTTTGGTATATTGGAGCTGCGTTTGTGAAGGACCGTCAGACTGGAAAAATCAGACTTTTCCTCAGTGTACCCTTCCTGCCTGCCCTTCAGCCTCACCTCAGCTGTCCCAGAGGTTTGGGGTTTTTAACCAAGATCTCCAGTGCTTTGAACCGGATGCCCTGTTACTAATAGCTGGAGGAGATTTCGAGGATCAGCTCAAAGAGGAAGTGATCCAGCGAGTTTCTCTTCTCCTCCTCTATTACATCATTCATCAGGAAGAGATTTGTTCTTCTAAGCTCAACATGAGTAATAAGGAGTATACATTTTACCTGCACAGCCTTCTCAGCCTCAGGCAGGATGAGGACTCCTATTTCCTTTCACAGAATGAGACAGAAGATATCCTGGCTTTCACCAGGCAGTACTTTGACACTTCCAGAAACCAGTGTATGGAAACCAAAGTGCTGCAGAAAAAATCTGGAATCCTAAGCAGTGATGGTGCCGATGAAAACACTCTTCCTCAGTTGGCAGCGACAATCATTGCTTTGTCCCTCCAAGGTGTTTGTCTGGGACAAAGAAACTTGCCTCCCCCAGACTATTTTACAGAATACATTTTCAGTGCCTTGAATAGTACGAATACTCTTCACCTATCAGAACTAGACAAGCTCCTCAACACTCTCTGGACTAAAAGTACCTGTATCAGAAAGGATAAAATCCATCAGCTTAGAAGGAAACAAAACAGCCTAACACTTCATGATGGAGACTACTCTAATCTATCTGTATCCATGGACCCAGAATCAGAAGATGGTCCAATTTCCTGGGATCAGACTTGCTTCTCTGCCGGGCAGTTGGTGAACATATTTCTACAGAACAAGCTTTCACCCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGCATCATTCAGCAATTGCTCAGCTGTTCTTGCCAGCTGCCCCAGAACCAACAAGCAAAAATCGCACCCACCACTCTGGAGAAACTGCTTTTCTTCTTTGAGATAGTCTGCAACGCCCATCATAGCCAAATTGTTCAGCCCTTATTTC EMBV3_00832 TTTAAAAAATTGAGGGAGGAAAAACGTACCAAAGACGGGAGCTGGCGAGGCTCATGCTGG Gene GeneID:507787|MCFD2:XM_002694196:696_cdna Constitutive 0 NULL GeneID:507787 16 GENE MCFD2 NULL multiple coagulation factor deficiency 2 EMBV3_07933 ATCTTCGACACCAATGACAACCTGTTCAACCTGGCCCTGTATGGGAACCCCTGGCAGTGT Gene GeneID:614562|CPN2:NM_001101232:126_cdna Constitutive 0 NULL GeneID:614562 1 GENE CPN2 NULL carboxypeptidase N, polypeptide 2 EMBV3_39309 TCTGGGGATAAACGAGGTCTGAAGTGCAGCGGTGACAGCCAGCCTCCCCTCTGCCCCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33296 GATTCTGAGTGTCAAGACGGAGGCGGAGGAACTGTTTGGGGAGACCATGGAGATGATGGA Gene GeneID:529939|LAMB3:NM_001081596:84_cdna Constitutive 0 NULL GeneID:529939 16 GENE LAMB3 MGC143240 laminin, beta 3 EMBV3_10052 CGAAAGTATTATCCCCAGAGAGTAAACAAGACCTTTGGGCACTTGGATGCATCATATACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25773 GTACTACCCAAGTCTTGAGTTGGAATAAGAGTTGGGAACAATTTGAAAATATGTACATGC Gene GeneID:533375|ESF1:XM_002692035:33_cdna Constitutive 0 NULL GeneID:533375 13 GENE ESF1 NULL ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) EMBV3_00138 ATTCCATCCCTGATCCGGAAAATCCCACAAGCCAGGGAGCAACTAAGCCCGTGTGCCACA Gene BVV0101_082205 + 0 NULL GK000001.2:128005703-128034608 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43771 ACAGCCTATAACCATCTTTTCGAAAGTAAGGGTCCACCAAAATATACAAAATCTGTTCTT Variant GeneID:515069|FKBP3:NM_001038112:244_cdna 228^335 2 EMBV3_33241 GeneID:515069 21 GENE FKBP3 MGC134043 FK506 binding protein 3, 25kDa EMBV3_30174 GATAAAGGTGAAAAGGAAAAGCACAGGTGAAAGCGTCTTGGCTCAAGGGTCAGCCCTCAC Gene BVV0102_009362 + 1 EMBV3_09993 GK000005.2:107709873-107729512 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20312 CGTCAAGCCAAAGAAGAGGAGAAAGAGCTACCGGAGCTTCCTGCCCGAGAAGAGCGGCTA Gene GeneID:789422|UBE2O:XM_002696167:127_cdna Constitutive 0 NULL GeneID:789422 19 GENE UBE2O NULL ubiquitin-conjugating enzyme E2O EMBV3_23807 GGCTCAGCTACAAACCAGCATCTTAGTGCCTTCATCTTTGTCTCTGTCTCTTGGGGTTGG Gene GeneID:510532|PARP9:NM_001076828:50_cdna Constitutive 1 NULL GeneID:510532 1 GENE PARP9 MGC143374 poly (ADP-ribose) polymerase family, member 9 EMBV3_17433 AGCGAGTTGGGGCAGCGTGCAGAGGGCGGAAAGCTGGGACCCTAGGCTAAAGTGAATATA Gene BVT0102_416437 + 0 NULL GK000011.2:5561244-5754341 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39870 GAACTCTGAGCCAGAAATTATATTTGAGGGGCCTGCGTGTCCTGGCTGTTGCTGGAGTGA Gene GeneID:615952|BRMS1L:NM_001076404:116_cdna Constitutive 1 NULL GeneID:615952 29 GENE BRMS1L BRMS1L MGC139052 breast cancer metastasis-suppressor 1-like EMBV3_27374 GTCAGTCCCAGTCTCCCAATTTATCTCTCTCCCCCCTTACCCCTGTAACCATAAGTTCAT Gene BVT0102_068518 - 0 NULL GK000011.2:62377282-62471604 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17345 CCAGAATTTGCCGCAGACTATTTCACGGATCCAAGACTTCCCAACAAGATTCACATGCAG Gene GeneID:767988|C3H1orf230:NM_001077049:172_cdna Constitutive 1 NULL GeneID:767988 3 GENE C3H1orf230 MGC133677 NCRNA00166 chromosome 1 open reading frame 230 ortholog EMBV3_31364 CGGCTATCGATGGATCTGCAACCCGCGCGGATTGCTTCATGGAGGTGCCATGGCAACAAT Variant GeneID:787270|THEM4:NM_001080368:178_cdna 113^445 2 EMBV3_04492 GeneID:787270 3 GENE THEM4 MGC152209 thioesterase superfamily member 4 EMBV3_00627 GACCTTCTTGATCCTGGCCTCTGTTGACTATGTTTTCTCCCACTGCGATTAGAAGGGAGG Gene BVV0102_064973 - 0 NULL GK000020.2:68137503-69472638 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43719 TCCAAGGCCAGAGGACAGATGTCTACAGCGACCTCAACACACAGAGGCCGTATTACAAAT Gene GeneID:282390|TYROBP:NM_174627:526_cdna Constitutive 0 NULL GeneID:282390 18 GENE TYROBP dap12 TYRO protein tyrosine kinase binding protein EMBV3_03630 GAAAGCGGAGACCTCCAAACCAGAGCCGTGTGATGCGGAACCAAAAAAGGCAAAGCAGAA Gene GeneID:100337477|LOC100337477:XM_002699846:64_cdna Constitutive 0 NULL GeneID:100337477 X GENE LOC100337477 NULL histone cluster 1, H2bk-like EMBV3_08963 GGAAGACTTGGAAAAGACCAAAGAAGAGTTAAAGACTGTGATGTCTGCCCCACCTCCGCC Gene GeneID:517111|RDX:NM_001075749:8_cdna UTR3_Alt 3 NULL GeneID:517111 15 GENE RDX NULL radixin EMBV3_18507 GTACTGGACAGTGCAGATGTAAAATGCAGAAACCTCCAGTGGACAGCGCAGTACTTGATC Gene BVT0102_080862 + 0 NULL GK000003.2:86641226-86650084 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173936 TCONS_00173937 TCONS_00173940 TCONS_00173939 TCONS_00173935 TCONS_00173934 TCONS_00173938 TCONS_00173941 1 XLOC_104477 Coding TCONS_00173938 XLOC_104477 Coding Coding HOOK1 3:86647446-86719011 j TSS129186 5288 1 TCONS_00173938_2 595 0.0329046898638427 17 0.926345648650159 0.000260441418441049 0.00038811529328928 0.000618767280889563 0.000385801807828928 0.000908519064436925 2.28973855934589e-08 0.000288326868509226 1.23088980189903e-10 0.000704273455857807 0.00031205814223197 3.22367511378851e-37 2.08104460794326e-14 1.27137532401153e-06 8.1081098164067e-22 3.01844741038913e-06 1.14843309225203e-18 7.04098852856799e-07 0.000996284423821252 0.00114530502520326 1.31739668943236e-13 0.000367291381968152 0.000581947814795609 8.18242290182769e-09 0.000306378299536733 0.000446776226353128 0.000699870823338819 0.000869239015432508 0.000136577294218338 3.40784886600277e-05 0.000115315249016949 XM_005204526.1 LOC785042 PREDICTED: Bos taurus protein Hook homolog 1-like (LOC785042), 0.0 8841 100.00 0.926815431164902 XM_005270922.1 HOOK1 PREDICTED: Homo sapiens hook homolog 1 (Drosophila) (HOOK1), 0.0 3602 79.02 0.764561270801815 TCONS_00173938_2 sp|Q9UJC3|HOOK1_HUMAN HOOK1_HUMAN Protein Hook homolog 1; 0.0 971 97.13 0.877310924369748 1 coding 1 1 1 0 -0.106734533087957 0.388703386561564 -0.0090175312596497 0.904886666290959 GCGAGGCTTCGCGCGTGAGCGGCGAGGGCACTGGGCCTGGCTACCGAGCTTTCCTGGTGGGCGAGCAGGTCCTCGACGTCGGCTCCTGGGGGAGCGCGGGGAGGAGGGAGGTGTCGGCGTCAGCGGTGTAGTCGACGGCGGTCCTGGCCATGGAAGAGACGCAGCCGCTTTCGCAGTCCGAGCTCCCGCTGTGCGACAGCCTCATCATCTGGCTGCAGACATTCAATACTGCTGCACCCTGTCAGGATGTCAAACAGCTGACTAGTGGAGTTGCCATGGCACAAGTTCTTCATCAAATTGATGTAGCTTGGTTCGATGAACCTTGGTTAAGCCGAATTAAAGAAGATACTGGTGACAACTGGAGAATAAAGGTGACAGCGCTTCAAGATGAAAAGAATTCACTAGTTTCTGAGAACGAGATGATGAATGAAAAACTTGACCAGTTGGATGGATCTTTTGATGATCCAAATACAATGGTTGCAAAAAAATATTTTCATGCACAGTTGCAACTAGAACAATTACAGGAAGAAAACTTCAGGCTTGAAGCTGCAAAAGATGATTACCGTGTTCACTGTGAAGAACTTGAAAAGCAATTAATTGAATTTCAACATAGGAATGATGAATTGACTAGTCTTGCTGAGGAAACAAGAGCCCTGAAAGATGAAATAGATGTTCTTAGGGCTACCTCTGATAAAGCAAATAAACTGGAGTCTACAGTTGAGATATATCGTCAGAAGCTACAAGATCTGAATGACCTTCGCAAGCAAGTGAAAACTTTACAGGAAACAAACATGATGTACATGCATAATACAGTCAGCTTAGAAGAGGAATTAAAGAAGGCAAATGCTGCACGCACACAATTAGAAACATACAAGAGACAGGTTCAGGATCTTCATGTTAAACTTTCCTCTGAATCCAAAAGGGCGGACACACTAGCATTTGAAATGAAGCGGCTTGAAGAGAAACACGAAGCTTTACTTAAGGAAAAAGAGAGACTAATAGAACAGCGTGACACTCTGAAAGAAACAAATGAAGAGCTTCGATGTTCACAAGTACAACAGGATCACCTAAACCAAGCAGATGCGTCCGCTACAAAAAGTTATGAGAATCTTGCTGCTGAGATTATGCCAGTGGAATATAGGGAGGTGTTCATTCGACTGCAACATGAAAATAAGATGCTTCGATTACAGCAGGAAGGCACTGAGAACGAGCGTATTGAGGAGCTGCAGGAGCAGCTGGAGCAGAAGCACCGCAAGATGAATGAGCTGGAAACCGAGCAGAGGCTGAGCAAAGAGCGAATCCGAGAGTTGCAGCAGCAGATTGAGGACCTCCAGAAGTCTTTACAAGAACAAGGCTCCAAGTCTGAAGGTGAAAGTTCCAGCAAACTAAAGCAGAAGTTGGAAGCTCATATGGAAAAACTAACAGAGGTCCATGAAGAACTACAGAAGAAACAAGAGCTCATTGAAGACCTCCAGCCAGATGTAAACCAGAACGTACAAAAGATCAATGAGCTTGAAGCTGCTCTTCAGAAGAAAGATGAAGATATGAAAGCAATGGAGGAAAGATACAAAATGTACTTAGAGAAAGCAAGAAATGTAATAAAAACTTTAGATCCCAAATTAAATCCAGCATCAGCTGAAATAATGCTACTTAGAAAGCAGTTGGCAGAGAAAGAGAGAAGAATTGAGATTCTGGAGAGTGAATGTAAAGTAGCAAAATTCCGTGATTATGAAGAAAAGCTCATTGTTTCTGCCTGGTATAATAAGAGTCTAGCATTCCAGAAATTGGGGATGGAATCTAGACTTGTGAGCAGCAGTGGTGCTTGCAAAGACACGGGGGCCTGTGCTCCTGCCCGGTCTTTCCTAGCACAGCAGCGCCACATCACCAGCACCAGAAGAAGTCTCTCTGTTAAAGTTCCTGCTGCGACAACTGATTAAACCGCAAAAGAACACATAAACAGAAGTGCCCTTAAAATGTTTTGTATCTTTCAACTAACTGCATGGTTGAAAAGAAGTGTATGTTTCTGGATAGCAGCTTTTTTAAAATCAAAATGTATGCAATTAATCTTGCCAGATTAATATGGAGACAGAATTTAGAAGTAGCTATCTGGGGGAGCACGTGTGAGTAATTGGAAGATATAATAAGGTAAACATCTCAAACGTTTGTCTTTGGAGAGTATTATATTATTTCACATTGACTTAGTATATTTTAATGTTCTCAGTTGTAGCAGTAACTAATTTGCAATGTGTAATCAGTTATATGCAATTTAAAACTACTGTTCTGGTCCATATAAAAATAGTGAACAGGTAGGCACATGGAGAACTATGCAAGAGTTATATTTTTTGATTAAAAATACACAGATATTACCTCTGACCTCTCATTCTGTCGTTGAATGGGTATATTTTATCATGTAATGGAAAATAACATTTGGAAGATTTGACTATATTGAAATGACTTCTCCATAGTAGAGTGACTATTTGGAAATGTTGCAGATTTAGACAAGGTCATAGTTCTCATATGTACCTACTATAAACAAAGGCTTCTGTATAGCATGCTTGAAATGTTAAGGGTATGGACTTTTGACTTTAAGAGATGACTTTCGGACGGGAAGCAAGCTGAAAAGTCTACTTTGTGTGAAATGCCCACACTATATTTAATATAATTAATGAAGATTACAATTATTGCTTTAAAGCATAAAATTATTATTGTTTTTAAGCGAAAAATTAAGAGGGCTTCTCGTTAAAAAAAAAAAAAGATAGTAGTTTACCTCTTCACTGAAAAGAGAGTGTACAGAGGTAGAGTGAAGGGTCAATTTGGAATAAGTTTTACCTTGTTTACTAATTAAGAAACCTGTCTTGGGCTGAGTTTATGGTATTCAGTTCATATCTGCCCAAAGCTCTTTTTCTCAAAGGTGTTACTCCATTATTTTTAGTTATTTTTAAGAGTCACACTTTGGAATTTTAATTTGAGTAAAATCTGTGCTGTCCAATAATGTAACCAAAAGCCACGATGTGGCAAATTGATTAAAACTGAAAATTCAGGTTGTTGGTTTCACTAGCCACATTTCAAGGGCTCAACAGCCACGTGTGGCTAGTGGCTCCAGTACTGGACAGTGCAGATGTAAAATGCAGAAACCTCCAGTGGACAGCGCAGTACTTGATCTTTTTATAAAAACCTGGAATACTCGATGTTAGAACACAAAGATGAAAAAAAAAAGAAAAATGTTAGGACGATATCAGACATGAAAAGGAATTGAATTGTGATGTAACCAGCATCTTACATTCCTTTCAGTTGAATACCTTGTGTTGTGACATTCACAGTTAATTTTTCCAGAGCTGTTCACAGTTACAGTACCGATCAGCACAGGTCTAGAGCGGGGGCCAGCAAACTTTCCATAAAGGGACAGATGGTCGATATTTCAGTAAATGTTTTAGACTTTGTGGGCCATATAATCTATTGCAAATACTCATCTCAGCTGAAAGTATAAAAGCAGCCACCATACACAATATGTAAATAAAATAGGTGTGGTTGTATTTCAGTAAAACTTCGCAGAAACCAGCAGTAGGCCAGACTTAGTAGGCTTATAGGCCTCTGTTAAAGATTTTATTCTTAGCCTCTTAGCCTTTTTGTTTTTTTGAAAATACGAGTATTGTTCCATTTATAGTATTATTCAGATACTTGGTTTTTAGATTCTATACCAGTAAATGTTTCTAATCATTGAAGATGTAAGAATTTAATACTCTATTTGGGTCTCTGAGATTAGGGAGCATCTGCCAGGATATTTTGTTTTATCAGGGTTACTTCTTTTGACTACCTCTTAGATTTTGGTGTTCTTTACTGGTGGTGCAATTATGTTGTGGGGTTGCATTTTCCTATATTTTTATAGTCTGTGCTTGCCTGTGACTTTTAGTGAAATGAAACTATTTTAGCATGCTAATTAAATTTTCCAAGTATTATAGCATTTTGGTACATTTTGGTCAATGTAAGACATCTGCTCCTTTAGTGTTTACTACTTGCTGTAATTGAGATTTCAGAAGCTCTTCAAGCTCCCTTTTAATGAAATCAGTTCTAAAACATCAATTTCAATAAATTAGAATTTTCACAGTCCAATTGCTTATAATTTTCCAGTTATTATATTTGAAATTTCTAAATAATTCATGCAATTTCTAAATAAGGATGTGAGGCTAGATTCTTTTTTCCTAAATAGAGAGAAAGCAAATTTTGTGATTTATCACTTTTCTAGTTGATAGAATTTAACATGCTCAATATGTATTTATACTTATAAATTACTAACATAATTTAAAGTTCTATATTATTGTGATTATTATATGGAAATTCAGGAACTGATCAGAAGTGAGAGTCTTTTCCACATCTGGTTAATATAGTGAGATTGACACCCTGTGGGTGGTAAAGATAAAGGAATTATTAATCTTAGAGAAAATGCTGAAAATTAAAGATCATTCCCAAAGTGGTTTTACTTTATAATCACTGGGACATTCCATTCCTTATCAAATACATAAATGCTGAATTTCTCTTCCCTTTATCTTTTTAAAATAAAAGTGTGTATACATATGACAGTGATGTTTATCCTCTGCTTAACTTAATGTAACGCAAAATATTTCAAGTTCATTGTATTTTTTCAATGAAGAAGACTGTTGAACTAATGATTTAAGATACATTAAGAATTAATGTCTTGTCTAGAAACATTAAACTGAGAATCCCTTGCTAAGATGCCCTCATCTTTAATAACTGGAGTGCTAAGTTGAATGTCAAATAATACTTCTACTTCTATACCTGTTTCTACACCTCTGGCCCTATGGGATGGCTTTTAGGCCACAATATTATCTGTGTTAGGTTCTCTGTATGTGTATTTAATGAATAACATTCCTATGTAAAAATGTGTGTATGTGGTTTTATGCATACATTCATATTGTGAATCTGTACATTGCAAAGAAGTAAATTTGTAAAGCACAACCATAAAAGAAAATAGTGTGCAGTTATTGAACTTGATGTATCTTAAATGTAATTTTTAGTTTATAAAAGGTTCTTTCTATTTTCTATGGCAAAGACTTTGACACTTAAAAAATAGAAGTGATACTGGATTTATTTTTGTAAGTATTTAGGATATTATTTTAAATAAATGATTGTCCAATATGATGGTTGTCAGATGTTTTAAGTAAATAAACTTTCTGATTTTGTGTCTGATATGTATTTTTAGTGGGTACAAGTGCACATTTATTTGCTGCTTTAAATAAAAAACTTAAATATTTAGACTGGTAAAGAGAAAA EMBV3_35773 CCTTCAGAACTTGATCCCAAACAGGGGCTTGTCCTGGTGTCACTCCTCCTTTCTGCAAGT Gene GeneID:520159|B4GALNT1:NM_001017943:1046_cdna Constitutive 0 NULL GeneID:520159 5 GENE B4GALNT1 GALGT beta-1,4-N-acetyl-galactosaminyl transferase 1 EMBV3_19328 GTATCTGCATTCTTCCTGATACCATCTGGTGACTTTCCACCCCCACACCTGGAGGACAAT Gene GeneID:100140233|DPPA4:XM_002694369:161_cdna Constitutive 0 NULL GeneID:100140233 17 GENE DPPA4 NULL developmental pluripotency associated 4 EMBV3_30005 CCGCCTGCCCCTGAGCCATGTGCTGGACGTCCTGTGGTTCCACCACGTCCAGCAGTCCCA Variant GeneID:100137087|JMJD7:NM_001114658:106_cdna 345^818 1 EMBV3_10745 GeneID:100137087 10 GENE JMJD7 NULL jumonji domain containing 7 EMBV3_21770 CAGTGCTGATTATGAAAGTGGTGGCGGTGCGGGGGAGTGGAATGGGGGCAATCTATTTTT Gene GeneID:614275|MOBKL2C:NM_001034755:295_cdna Constitutive 0 NULL GeneID:614275 3 GENE MOBKL2C NULL MOB1, Mps One Binder kinase activator-like 2C (yeast) EMBV3_30692 TCGAGGGACCATGGCCGATCCTCGCGTAAGGCAAATCAAGATCAAAACCGGCGTGGTGAA Gene GeneID:327683|TBCA:NM_175803:213_cdna Constitutive 0 NULL GeneID:327683 10 GENE TBCA MGC133522 tubulin folding cofactor A EMBV3_09994 ACTTCCAGGTTGAGTAACAAGAGGCTGGAGGTTGTTTGATAATCTTATTTAAACTGGTGC Gene GeneID:517825|TDG:NM_001083696:1031_cdna Constitutive 4 NULL GeneID:517825 5 GENE TDG MGC140185 thymine-DNA glycosylase EMBV3_01923 ATTTTTCAACAGGTTGGAAGCATGCAATCGGATAGAGGTCCGGTCAAGGCCAACCCTTCA Variant GeneID:535449|MTFR1:NM_001035412:31_cdna 180^394 2 EMBV3_09632 GeneID:535449 14 GENE MTFR1 MGC127123 mitochondrial fission regulator 1 EMBV3_24642 CTTTGAGGTGCTGAGCTGGCTGGAGGGCTGCTGTCCTGCCTGTTGGCTATGGCATATGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07512 CACTGAAACGGGAGAGAGAAATCTGGGTGTCCTACCTCAGTGGTTGTCAGTCTCAGAATC Gene BVT0101_074436 + 0 NULL GK000011.2:30887993-30962340 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11254 GTGTGGCTTTGAGGTATTTCTCTTGTAACTGGCATAAAATTGCGTCTCACCCCCATCTGC Gene GeneID:507187|TCEAL1:NM_001045960:39_cdna Constitutive 0 NULL GeneID:507187 X GENE TCEAL1 MGC137136 transcription elongation factor A (SII)-like 1 EMBV3_31733 GCTATCAGCCTTGCCCACTGTGACTTCTCCAAACCCAAGGAGGAACCCTAGATAAAATGC Gene GeneID:506790|TXNIP:NM_001101875:59_cdna UTR3_Alt 3 NULL GeneID:506790 3 GENE TXNIP MGC154995 thioredoxin interacting protein EMBV3_10295 TAAGACAGATGGTGTAATACAGTCAACACACTGAAATGCCTTGCATTTCTTTCTCTTTTC Gene BVV0102_075048 + 1 EMBV3_02996 GK000005.2:57059974-57063070 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191985 TCONS_00191982 TCONS_00191987 TCONS_00191986 TCONS_00191981 TCONS_00191988 1 XLOC_117072 Coding TCONS_00191981 XLOC_117072 Coding Coding PRIM1 5:57042166-57061075 = TSS143768 2746 1 TCONS_00191981_1 418 13 0.855458007192723 0.00022316240068387 0.000841072809903719 0.000630861077796299 8.23803164576557e-05 0.00034416222133741 7.32739091508978e-05 0.000231138433283835 0.000160832417571495 0.000553795960080329 1.10269593312439e-09 5.51236546442342e-52 2.10418459631178e-06 1.465178549263e-05 6.97472843769063e-07 4.6654829046605e-08 0.00300789357633728 0.000403571342915023 0.00330266993636967 0.000403631247465529 0.000471541288408631 0.00017489701793866 0.000722442835541238 0.000920337142672892 0.00101922440982731 0.000488203578116712 0.000407188525089348 0.000508332954169409 0.000109086251712404 2.40566926210448e-05 0.000173831741540467 NM_001145865.1 PRIM1 Bos taurus primase, DNA, polypeptide 1 (49kDa) (PRIM1), mRNA. 0.0 2937 100.00 0.592498179169701 NM_000946.2 PRIM1 Homo sapiens primase, DNA, polypeptide 1 (49kDa) (PRIM1), mRNA. 0.0 1896 89.15 0.527676620538966 TCONS_00191981_1 sp|P20664|PRI1_MOUSE PRI1_MOUSE DNA primase small subunit; 0.0 777 87.80 0.997607655502392 1 coding 0 0 0 0 -1.50899701406805 0.00354178250638726 -0.0345341355036925 0.825302228514818 CTGCGGACGGCGGGCCGTGGCCACGATGCGCCTGCGCAGTGGCTCAGGCTGGCCTGTGTGGTTCCCGCCAATTCTTGCGGTAGTCCTCCCACGGTTGAATTCTGTGTTCCATGGAGGCGTTTGATCCTGCCGAGCTGCCCGAGCTGCTTAAGCTTTATTACCGAAGGCTCTTTCCCTACGGCCAATACTATCGCTGGCTCAACTATGGCGGAGTGGTAAAGAATTACTTTCAGCACCGTGAATTTTCATTCACATTGAAAGATGATATTTATATTCGCTACCAATCCTTCAACAACCAAAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCATACAAGATTGATATTGGCGCAGTATATTCCCACAGACCCAATCAACACAATACAGTGAAGCTGGGAGCTTTCCAGGCTCAGGAAAAAGAACTGGTGTTTGACATTGACATGACAGACTATGACGATGTGAGGAGATGTTGCAGTTCTGCAGACATATGTTCCAAGTGCTGGACCCTCATGACGATGGCCATACATATCATCGACCGAGCACTAAAAGAGGACTTTGGATTTAAACATCGTCTCTGGGTATATTCTGGAAGGAGAGGTGTTCATTGTTGGGTCTGTGATGAATCAGTTAGAAAACTGTCCTCTGCAGTACGTTCTGGGATAGTTGAATATTTGAGTCTTGTAAAGGGTGGTCAAGATGTTAAAAAGAAAGTTCACCTAAGTGAAAAAATTCACCCTTTTGTCAGAAAATCTATAAACATAATAAAAAAATACTTTGAACAATATGCCTTAGTTGATCAAGATATTCTTGAGAATAAACAAAGTTGGGATAAAATTTTAGCCCTTGTTCCTGAAACAGTGCGTGATGAACTTCAACAAGGCTTCCAAAGGCAGAGCAATTCACCTCAGCGTTGGGAGACTTTGAAGAACACCATCAACAAATATCAGAAAAACAACAAAAACGACAAATGTGGACTCTGGCTTGAGTGGGAGATCATGCTCCAGTATTGTTTTCCACGACTGGATATCAATGTTAGCAAAGGAATCAATCATTTACTGAAGAGCCCTTTTAGTGTTCATCCTAAAACAGGTCGCATTTCTGTGCCTATTGACTTACAGAAAGTGGATCAATTTGATCCATTTACTGTTCCAACCATAAGTTCCATTTGCCATGAGTTGGATGTTATTTCTACTAAAGAAGAAAAAGAGAATGGAACTGAATCTGATACTAAACACAGAACCAGAGATTATAAGAGGACCAGTCTAGCTCCTTTTGTAAAAGTTTTTGAGCAGTTTCTTGAAAACCTGGATAAATCCCGAAAAGGAGAACTTCTCAAGAAGAGTGATTTACAAAAAGACTTCTGAAGATAACAGCTCCTTTTATATGAATATGGATTATCGTCTACCTTCAACCAAGAATCAAATACTTCAAGAGCCATTTAATAAACGTAGCAGAACTGTGTATGTGTCTTAATGCTCAAAGCAAAATTTCCTTTTCTTGAGAAAGAATTATGTTGAAAAGATTCGGGAAACCACCAAAGGAAAATGTTCAGATTCCTGGAAGGAGCAATAATGGGAGGATATAAGTGAATGCAGATTAATCTGTAAAATTTAATATTATAATTCTAAGATTACTGATACAGGTACTAACTTTTAGTAGTTGCCATGTATAGAAGTAAGTGAGTAGTAATATGACCAAGACTTTAATGTCAGTTCACCAGATTCAACCTCCATATTTCTAGGTGTATGAGGGTTTTGTTCTTAAGTTCTTAATTAACACTTAAGTTAATTATACCTGGAGTGTATATTCAGTAACTTCCTCATTTTGTTTACTGATACTTTTATTGGTCAGGCCACACCCCACTCCTTGTCTTTTAAAAAATCATTTTAAAATGGGCATCTAAACCTACTATAACTTTAATTCAAAAGATATGACTTAATACTGTTGCAATATTAGAGCCTAGTATTTTTTACAACTGTTGGCAATTGTAGCTCCTTCTTCCCTCAGAGAATAATTTTCTAAGCAATTTAGAAAAAATAAACCACTTCACCAGCATAAAACTTTTTGTACTTGTCAAAACACTTGGACTTTGTAGATCTCCACTTTAAATTTAAGTGTTTTTTTTAAATTTAAATTTTAAAGGTTTCATTTCTTCCATATTTGACTTCATGTGATAGATTCTGAAATGTCAGATTTCTTTTGCCTGATTTTACAGCCAGTCTAAACAAAACAGTCGTTCTGGTTTACATTGTCTTTTGAGAAACATTGAGAAGCTGGCTTTCAGGCTGGTGCTTTCCATGGGGTATGAAAATTTTCCTTTCTTTGCATTACCTATAACATTGTTTTCACCATAGCCACAGTCTTTTTTCTTTTGTCTTTTGACTTATATAAAACAGATGGTGTAATACAGTCAACACACTGAAATGCCTTGCATTTCTTTCTCTTTTCTAATTTTTTAAGAAAAAAATTAAAGACTATTGTGTAAAATTCCTCTGTTGAACTTCTGTTTGCTATATATTGTTCAATCTTTTTGGAAAACAGTGACTGGTCAATTAAAACTCCTGAATACAAAATTACTAAAGATTTGTTAGTCCATCTTAAGTAAATGAGAGGAGAAAAACTGGGATTACCCATTCAATAAAAGATGTTTTAGCATTAAAGCATTTTAATGCTTTAATATTAGAGCCCTTGATAAAAACTGGTATAACAGCCCATAAAATAAATATATTGTGCTTGTATATAA EMBV3_18173 TATGTCTGAGTACACTTATCCCACTTCCACCTCTACCATCCCCTAAACTCTCACGTTCCC Gene BVT0102_086253 + 0 NULL GK000010.2:46466077-46471345 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017123 TCONS_00017121 TCONS_00017126 TCONS_00017127 TCONS_00017130 TCONS_00017125 TCONS_00017128 TCONS_00017122 TCONS_00017129 TCONS_00017124 1 XLOC_008973 Coding TCONS_00017123 XLOC_008973 Coding Coding USP3 10:46468592-46570054 j TSS11778 5007 1 TCONS_00017123_6 435 16 0.950808685110535 1.22580611015814e-62 3.06942988832392e-05 2.31303864019967e-05 2.9790073815587e-05 1.15319633507259e-05 0 0 2.17307433403568e-05 2.01960974447592e-14 0.000208134687506233 2.80507643783926e-05 0.000258311302503383 3.31672026428906e-29 4.04954952487413e-15 2.64047597625663e-08 0.000606905585618542 3.29010762764125e-25 4.51090703256003e-05 1.91483058737116e-17 4.98359184120123e-24 1.93998767063314e-155 3.84513290610473e-119 0.000242365207243303 0.000163027316095643 2.34436473792026e-19 3.97762316432156e-161 3.48381831808369e-44 2.38010625266425e-05 1.46857936215454e-05 4.73299111704016e-06 XM_005211688.1 USP3 PREDICTED: Bos taurus ubiquitin specific peptidase 3 (USP3), 0.0 8956 100.00 0.991611743559017 NR_046342.1 USP3 Homo sapiens ubiquitin specific peptidase 3 (USP3), transcript 0.0 3094 86.71 0.51467944877172 TCONS_00017123_6 sp|Q9Y6I4|UBP3_HUMAN UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3; 0.0 867 97.47 0.997701149425287 2 coding 0 0 0 0 0.0173235680932562 0.907285049593688 0.07021271115251 0.190214499744659 GCGGCTAGCGCTGCTTTTCAGGTCTTCTTGTGTGCCGGTCCAACAAGAGCCCCTGGGTCTGTCTGACTTGTTCAAGTGTCCACTGTGGAAGGATTTGGGGAACCTGAAAATACTTTGTACAGATAACTTTAAAAAAAAAAAAAAAAGAAGAAAAGTAGAAGCACTTAAATTCTGCACTTGAAGAGACAGATTCCTCTCCTAGATTTTGAGAGGTATGTGAATGGCCATGCAAAAAAACATTATGAAGATGCACAAATACCCTTAACCAACCATAAGAAATCAGAAAAGCAAGAAAAAGCACAGCACACAGTGTGTATGGATTGCAGTAGCTACAGTACATACTGTTATCGCTGTGATGATTTTGTGGTTAATGACACCAAGCTGGGACTGGTACAGAAAGTCAGAGAACACTTACAGAACTTGGAAAACTCAGCTTTCACAGCTGACAGGCATAGGAAAAGAAAACTTTTGGAAAACTCATCACTGAACAGCAAGTTACTAAAAGTAAATGGCAGCACCACTGCCATTTGTGCCACGGGCCTTCGGAATTTGGGGAACACGTGTTTCATGAACGCCATCCTTCAGTCGCTCAGTAACATTGAGCAGTTTTGCTGTTATTTCAAAGAACTGCCTGCTGTGGAATTACGGAATGGGAAGACAGCAGGACGGCGAACGTACCACACCAGGAGCCAGGGGGAAAACAACGTGTCTTTGGTGGAAGAGTTTAGGAAGACACTCTGTGCTTTATGGCAAGGTAGCCAGACTGCATTTAGCCCGGAGTCCTTATTTTATGTTGTTTGGAAGATTATGCCCAATTTTAGGGGCTATCAGCAGCAAGATGCCCATGAGTTCATGCGCTACCTGCTAGACCACCTGCACTTGGAACTCCAGGGTGGTTTCAACGGTATTTCCCGCTCATCAATTCTGCAAGAGAATTCTACTCTGTCTGCAAGTAACAAATGTTGCATAAATGGAGCATCTACGGTTGTCACAGCTATATTCGGAGGCATTCTCCAAAATGAAGTTAACTGTCTCATATGTGGGACAGAATCTAGAAAGTTTGATCCATTCCTAGACCTTTCATTAGATATTCCAAGTCAGTTCAGAAATAAGCGCTCTAAGAATCAAGAAAATGGACCAACTTGTTCATTACGAGATTGTCTTCGCAGTTTTACTGACTTAGAAGAACTTGATGAGACAGAGTTATATATGTGCCACAAGTGCAAGAAGAAACAGAAGTCCACTAAAAAGTTTTGGATTCAGAAACTACCCAAGGTGCTATGCTTACATTTGAAAAGATTTCATTGGACAGCATATTTAAGAAACAAAGTTGATACATATGTAGAATTTCCCCTGCGAGGCCTAGACATGAAATGCTATTTACTAGAGCCCGAGAACAGTGGCCCAGAGAACTGCCTGTACGACCTCGCTGCTGTGGTGGTGCACCATGGCTCTGGGGTCGGTTCTGGACATTACACAGCATACGCAACTCACGAAGGTCGCTGGTTCCATTTCAATGACAGTACTGTAACACTGACCGATGAAGACACCGTGCTGAAGGCCAAGGCCTACATCCTTTTTTATGTGGAACGCCAGGCCAAAGCTGGATCGGACAAACTTTAATACCTCCTCCAAATCATTATTTGTCAACTATACCGGACAGACATTTCCAATTTTCCATAAATACTTGATCTAAGATTTAATTTCATTATGCACTTTTCAGTCTCCTGTTTTGGGTTTAGTTTTATTTTGTCAATGGTAGTGACTTATTGAACATGGGCACCAACTAATTTTTTTTTTTTTAGTTCTACCAGAAAACCTCAGCAGATATTTTGATTTGCTGCTTTAGTTGTAATAATTCAGTTTTTATATGTAGTTTCAAGAACTTAGTTCTATTTGACTTTTTTATATTAATGTTCAGTTCTCACTTTGAGGCACATTTACATCAATGCTTTGTTACTCTCATATGCTGAAAGCGAGAGATGTTCACGATTGTGAAGAGCAGTGTAACCACCTGCTGCCTTCTCACAGATCAAGGGAGATCAGGTTGGCTCTAAACCAAGTTATCATGTGTGCTCGTAAATTTGTGGCTCACAAGAGTTCAGTGACTGCTCAGTAATCATTCTTTCTGCTTGTAAAAGAGAACAGGAAGGGCATCATTAAATAGACCAGGTGACTGCTGCTCTTGATATCTCTCAAAGGTGCTGTTTATCAGCACACACTAAATAAATCAGTTGATTTAGTTGTACCTACATTGCAAATTCAAGAATTACTTTTTTTGTTTGTTTGGGGGCACTTTCATAGATGAGATAGGGGTACTGTACAGTCCAAATAAGACCAAATACACTTAAAAGTGTTTCAAAAATTCCGTGACACAGCTCCATGTTATCCAAGTGTTATTTGTCCAGTGTGAAGAAACTGTAGTGTCGTGTTTGCCTTTTTGAGTCAGCACCTAATTCCCCCATTGGTTGTAGCACTGGGATTAACTGCATGTCCACTCTGGTCTTACTTCTTACTTGGCCACCAGAGGTTGAGATGCTACCTTCCAAAGTTGATTCTGACCATCACCTAAACTTCGGGTAACACTGTGGAGTCCACAGGAGGAAACTAAAGTCTTTAAGTTTTAACAACTCTTTAAACCTCTCACTGGCCTATGCTCATAGCAGAGCAAATGAAAATATTTTCACTTTGAATAAGCAGAGTTTTTGTTGTTTAGCTTAGCAGTCTTTTGAAATTGTTTTCAAGAAAAGTAGGCACCGGCACTACTTAGCTTTAATTCAAATTGAAATCTGGAACCAGAATCCCATCTAATGAAGCTTCCTGTGCTTTCCTCAAGTGTCTGAGTCAGCCTGCTGATCTTGGGGTGCTGGTGCACAGCGTGCAAATTAGTGAGAGGAGGAGGGGGCTCCAGCTGGGCCTGTGCGATAGGACCAGCACATTGTCACGTTCGCTCCTTGTTCCAGTCGGTATTTTCCTCTTGTCCCAGTTCTCTACAAGTTGTTACGGGGGGCAGAATGTAGTTAGTTTATGTTAAGCCAGCCAATCATACTTTCTCATATTTTTTTCTGTTAAAAAAAAATGGTCCAGATTTTAAGTGTATGGATGTAAAAGAAAGTTGAGTGGCACTCCCCCTAGCTTGGATATTTGAAGCTGCGGAAACAGAGCTGCTTCATTCCCACTTTAATATTAGCTGGAAAAATCCCACATTTTCTCAGAGCAGAACACACCTGCTAAACCGTTTAAAATAACTAGGAGCAAATTATGTCTGAACGTCTACCGTCCAATACAGTGGTCACTGGCCACGTACAGTTAAGTGTTGATTTTAATTAAAAATATATTGAAAACTCAGTTCTTCACACTGGTCATGGTTCAAGTTCTCAGCAGCCACTCGGCACAGGCCCACCTAGGGCTGGACAGTTCCACCTGTGGGCAGAGCTCTCAGATGGTGCTGGTCTACAGTTTCACTCCAGAGAAAAAAGCTTTGCCAGCATGTAGAGATCTTAGAACTTAGAGAGCCCAGAAGATAAAATTAAGAGGAAAACATGTATTTAAAACAGTTTACAATGGTAAATTACATACGTCGAGCCACAACTTTTTGAACTACAAAAATGACAATTTCACATAACTTGATCTACTGTATCAGTACATTAACATCACATGACATTGAACTAGAAATGTGCATCTCCTCTGACCTCACTCCTATGAATCCAGTCTCTCTTGCTTAGAAGATACACAGCAGTAACTTGTAACATTTGCACTTAGATCACTAGTCTCTGCGTGGGCAGCAGTTACAATTCCAACAAGAAAGCCTCCGGCAGTGTTCATGGAGGAAAATGGCCTCTACCAAATGGAACTTACAACAGACTAGACTACTTTGTTGGGGAAAGTGGTGCTTACACAGGCAACATGTTGGCTTAAGAGATGAACACACTTCCTCTATTGAATTTTGCAGTGTTTCTATCTCTTCATTTGATTAAAGCAGACATGCCTGAAGGATACCATGAAGGTTCTTTGGAAAAGCGACTGGATCCATGTGAACTGTGCACTTGAACACCAGTGATGTAAATGTGCCTATTTCTGTTTTGAAAATTTAACTGTGCAGCCTTATCACGCCTATTTTGAAAGCTGACCTTCGTGCTCTTCAGGGCTGTTCCCTGGTGCCGTGTTGCCTCTAGCACGTGTGTGGCTTCCCACTCAGAGAGCAGTGCTGAGGCAGGGCCTCGCGCCAAGTCACAGGGCTCCTCGGAACAAAACTTCCTCAGAAGTCCTCCCACACAGGTGGGTGACAGAAACAGTTTGTGGCAACACAAATCTCTCTCCATGGTGGAGAAAACCTTTGCTTATCCACTGGATTCTACTCAGTGTCTAGTGATGACAAATGTAATAGAATTAAACCAGTAAAGTGTATGGGCCCTGGTTAAGTGTTAAATGTGTATCTCACCTGTGGAACCTGCTCAGCAGCTTGGTTTCTAGGGTTGGGGACATATTTATTTCTTCAAGCCAAACCTCTCCATTGGTTTAGTGTGTGTACATATGTCTAAGTACACTTATCCCACTTCCACCTCTACCATCCCCTAAACTCTCACGTTCCCTTTATAGCTGAAGTGGCCTCTTCACGTGGGCCCTGGAGAAGCTCCTGAGCAAAGTCTGTTTCTGCAGCCAGGAACAGATAAGGGGGACCAGAGCGTGGCTGCAGGAGGGTGCCCACAGCGCAGGAAGGAGTGGGAGTGGGTGGCATCATGCTGTAGTCCAAGGTCTGTGCATCACCTCGCTGGGTGAGGACCTTCCCCCTCAGGTCTGACTGCGATGGACTTCAGACTTCCCTCTGTGAGTGTTGGTTGTGTGAGAGGTAATCATTTCCACTGAAACCTAATTTGTATGATGCTGAGAGGATTACTTGTGCAAGTGACTGATTTAAGTTGTAATCATAGCCCTTTTCTGCTTCACCAACCTGAACTGTTTTATGGAAAGTATCATTAAAGATCTGGTCTCTTCCCTTTTGACTAT EMBV3_18138 AAGCAGGTGGTGTTCCGGGACGAAGACAGCACGGGCAACGACGAAGACATCATGGTGGAT Gene GeneID:540889|PHF13:XM_002694107:421_cdna UTR3_Alt 2 NULL GeneID:540889 16 GENE PHF13 NULL PHD finger protein 13 EMBV3_29020 AATGTGGCTTTGTCACCTCCGAGTGGCTAGTGGGGCATCTATGCTTTCCATCCAGAGTGT Gene GeneID:528990|RRP12:XM_002698417:364_cdna Constitutive 0 NULL GeneID:528990 26 GENE RRP12 NULL ribosomal RNA processing 12 homolog (S. cerevisiae) EMBV3_22315 CGTCAAAGAGAAGCTGTGTTATGTGGCCCTAGACTTTGAGCAAGAGATGGTCAGCACTGC Gene GeneID:780991|ACTBL2:XM_002696317:44_cdna Constitutive 0 NULL GeneID:780991 20 GENE ACTBL2 NULL actin, beta-like 2 EMBV3_29378 AACACAGGAGTCCACCATGGAACAGCAAAGAGAATATCAACACAGAAGGTCTCCAGACAC Gene BVT0102_148042 + 0 NULL GK000030.2:138747778-138878611 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245949 TCONS_00245951 TCONS_00245945 TCONS_00245950 TCONS_00245944 TCONS_00245948 TCONS_00248514 TCONS_00245947 2 XLOC_150859 XLOC_151612 Coding TCONS_00248514 XLOC_151612 NonCoding NonCoding - X:138747984-138752987 - TSS185836 4386 4 TCONS_00248514_7 93 0.0383036935704514 2 0.123550579768093 0.000149549498224751 0.00164539436371629 0.000221077726886858 4.78118791879859e-29 0.00110246839852015 0.000186980339338759 0.000656446337138599 0.000829405070385263 1.30312959883238e-12 2.39693029846511e-05 0.000757510803480918 5.28246274421779e-05 1.36540973075254e-84 3.65050800557896e-09 2.77317037253449e-05 0.0259741711920099 0.00811775844433285 0.00443124587916084 0.000554380731343573 0.000253427772236582 0.000309917785586022 0.0114941130011901 0.00694511327558783 0.00991312521680578 0.000689090343571779 0.000858169932451186 0.000621708499260211 0.00187482396303003 0.00106219100493516 0.002894207441033 XM_002700423.2 PRKX PREDICTED: Bos taurus protein kinase, X-linked (PRKX), mRNA. 0.0 5029 100.00 0.635430916552668 NM_005044.4 PRKX Homo sapiens protein kinase, X-linked (PRKX), mRNA. 3e-27 129 89.69 0.0218878248974008 0 noncoding 0 0 0 0 -0.198598346914593 0.189017765095895 0.0167491594552961 0.721711647612197 ATGTTGTAAACCAGAAACAAAGATAATTTTGTGGTCACTTACATCTCAGCAAAACATAAAAATTTTAAAAGAAAGATTGCCACTGGGGGCTAGATGAAAGCAGAGAAGCTATAGCTTTTCCCATGACCAAAGAAACAAACCAGAGTCAGACTTTTATCTGAAAAGATACAAAGTTTTATTAAACAAACCTGGAATCAATGGTATCATTCCATAAATTAGACAGCAGTAAAATCTTCCCAGGGTGTGTGTGTGTGTGTATATATACACACACATACATACACAAATCACAGTGATTTTTCATTGTGCAAGGAATGGAGAGGTGTAGAAACAGGCTTTTTTATTTTTCTTTCTTTTTTAAACCACGAGAAGCTGAGACGATCAGGGCGGGGCTCCCAGTATGACTCGAGCAGGAAGGTGGCACACCAGCCCTGGATGCTTCATCCCTTGAGAAAGAAGGAATTTCCGACCGCCCTGTAGAGCCGGAGAAAGCATCTCAGGGAGCCAGGAAAGGCAGCTGGTGAGCAGAAACGCTTCTGATCCCAGTTGCACAACAACACACGTGCCGTGAGTTTTATTTAAATAACACAGGAGTCCACCATGGAACAGCAAAGAGAATATCAACACAGAAGGTCTCCAGACACAATAACTTAGAGGGAACGGTTCCAGAATATTTCCTTTTTGATTATCAAGGATTGCATGTGTGGTGGTGACCACACGGGGTCAGCAGGAACAAGCTCGGTATGAAAACATGATGCTTGGTGGAAGCATCGGCCCACCACTCGACCTCCACCAAGACACAGACACACACACACACACAGACTCAAATATATTAATTAAGACAATCGTACACGTGCTTTTTCTCTTTGTTCTTGGTGAGTCAGCAATGCCCACGCGAGTTAAACCGATTAGTCAGAAACAGATAAGAAAGGGTACAGCGTACAAGATGTTTCAGGAGGTTTAGAACACACGCCAGGCAGATGGACCACCGGAAAAAAAAAGAACACGGGCACCTCACTTCAAATCTCCACTGGGAGCGATCAAGAGACTTGCATGATGCTGTCAATTTGTGATGCAAAATCAGAGGACTGGGGACAAAAAGAAAAATTTCCAATCTTTCCAGCACCTGAAGCTACAGCGAGGATTCTGTTGTTACGATGGGGAGCGAGTGCAGTCTGCAGGGTTCACCCAGGTGGGGTGGCCCTCAGTGCCTGCAGAGCACAGTGTCGGGGTCCTGCATGAACAGGATGGAGCCAAATCTCACAGCTAACAGTGGTTTCCCATCGAGAGGCAACGTGGGTCGTAGGCAGAAACAGCGAACGCAAGTCGAATGACTCAACTGCGTGGGGCTGCCGGTGACTCGGATGGGTGGCAGGCTGGTCCTCAAATGCAGATGCAGAGAAGGAAACCAAACGTCGCCGGAGATGGTGAAAAACAGGTGATGTCAGACCTGCCCGAGGAGCAAGAATGGGAGGAGTTTTAAAGTATCATGATGGTGTGACGTGCGTGCCGGTTATCGGGGTTTTTTCCTTTGCGTATTTTGACAAATCGACAGCAGAAATCATGGGTTTTTTTTTTTTTTTCTTCCCATTGCTGGCCAATGATACAGGTCTGCTGAGCAGGATATCCCAACGGCCACGACCATAAACAATATGCCGTTATGACCAGCTAGCATTTTATCTCCTTGAGAGTTTTACAGATGGCTCTCAAACCAGGCTGGCTTTATTCTTCCCTGAGGAAAACAAGACCCACCCCGATCCACCTCTTGAAATCAATGCATTTCCTAAAGACTTTACAAGATATTTTGGGGGGGAGGGTGGGTGGAATAAGGACCATTTTTAAAGTCTTTACTGAATTTGTGACATTGCTTCTGTTTCGTATTTTTGGCTTTCTGACAGTAAGGTTTGTGGCATCTCAGCTCCGCCAACCAGGGGTTAAACTCACATCACCTCCCCACCAACTCTTGAAGGTGAAGTCTTAACCACTAGGCCACCAGGGCGGGGGGTGGTGGGGGAGTCCCGAGACTTTTTAGAGTATTGTCACTTAAGGAGATATTGCCGACTTGTCAAACGGCAGCAAACAAAAAACAGATCTCTCCTTTTCCGGTTCGGAATGTTGTCACGGCGGCCGTGAACTGTCTTCTAAACCTTGCACACTCTGATTACTTTGGATCCGAGACTCGAACAACACAGAATGCCTCCAGGCAGTGAACGCTTTTCTGGTTGCATGCGGTGAGCCATCCATGTGTTCAAGACTCATTTTGATCGCGCCCAGCACTGCATGACGTCAGACCATTTAATCTACGGCCCAGCCACCAGCACATAATGCGTTCAATAACTAAATGGGTGGCAGGGGTGTGAAAGGTGAGGTAAAGCCCGCCTGGCAGTGTTGGAATTCCTCTTCCTTCACAATGTGCTTTGCATGGCGGATGGTCAACGACCATGCTTTTATAAAGAAGCGAGCCATCCGTGGTATTTGAACCTTTGTTTTCCCTGCATACGTCTTCAAAATTAAGGCAACACATGTGCGTCCTTGTGCTGTTTTCATCTCATAAATTACTAGAGAGGAAGAACGAAGCCAAAAAAATATGCATCAGGATCAACATGTGTATTTACAATTTTTTGTATTGTGTTCAAGAAAGGTGTTTCATTTATTTCGTGTTTTCTCAAGCATAAGGCTCCAAAGAATACTCATTTATTTTTATAGTCAGAGGACACAGGACTGAATGCGTTTCCCCGTGGAGGCTGTATCTCTGCGCAGGTTCGCGCTGCTCATTTAACCTTCTAACATTCAGTGATGTAACAGTTCAGAAACGGCATGATAAAACTTTAGTCCCAGTTGGCTCACCGTTTAATCCAAAGAGCATGTGGTGATTGAAAAGTTACAGACTCAAAATAACAGTTCTCTGGGAACGTTTATCCAAGTGCACCCTTTGAAAGTAACCATTCTTCAGGGTGCAAATGGTCAAATGTGATAAATACATGTATGTCCTTTGACATTTGTGCTACGTTTAAAGAAAAAAAAAACGGATACTTTTCCCAAACATCAGCTCTCCACACCCCTAGATGTGCCTGCAGAAGCGGGGGAAGCAAAAGCTGGGAAAGACACACTTTTCTGGCCCAGCACAGGAAGGAAACAGTGTCGGCAGCAAAGAACTCACCAGGTGACCCAAGAATACCTGAGTTGCAGAGACCTGAGAAGAGTTGAAAGCTGAGGGCGCACCCAAGCCTTTCTAGCAACATATCCCGAGGACACACTGCCTGGAGCCCTGAGGTCCAAGGAGCTGAACCTTTCTGGGCTGGAAAAGGGACGATGAAGGGCTTGGGGGGAGGGAGGGGCCTGGGAGGTCTACTGACTGATCCCCCGCAGCCACGGAAGGCTCTAGAACCGACTGCTTAAATGCACAGACCTGCGCCGGGAAAGGGCATGGCTGGACCCTACGACTGGATTTTACACAACGGGTTTGAGCCACTCTGGCCTTTCCAGCTGAGTCCCGTTTAGCTTTTTTCCCACAGCAAAGGTTAGAATCAGAAAGCAGAAGGGAAAGAGGGTAAAGAAGGCAGTGAAGGAGGATGCCCAGCACCTCTGACCACGTCCTGCTTCTGGGAAGATGCAAACTTCAACAGCAACACTTGCGCACGGCCACACGCTTGACACCTGGCTTTCGTGATCGACAGGGTTCACGGTCCTCACCCAACCCTCGGACCCAAAGGGAAAGCAAAGCTCAGCCCAGGCTTGTCCGGCACAGGCCTGGCAGGTCTGTGAAACCAGAAGCATAGCGAACACTGCTGAAGAGAAATAAAACCAAGCAGAAACAAGCAGGGTTCAAACGGTTCCATCGTGCCCCTTCCGTTCCTTGCTTTTCCCAAAACCAAAGGGGAAAAGAAAATCATGTGCGTTAAGTTCCTCGAGCCAATGCTGAAAAAAGACTCTTCTGTATTGGGAGATGCAATTTTGGTCTAGGGATTGAACCTGGAATATGAATAGCTAGCCATCTCCCTACAGAGTCTGAAATTTTTTTTAATGCCACAGACAAAATACCTTGAGAAAAGCATTTGCGGTCAGCGGCTAGTCTTGGACTAAAATTCAAACTCACATCTCCTTCCTTTGCCTTCTGGTTTCAAGACCTCAGGCTAGCAGACACAAAGCATTAAAAATCCTGCATACAGACTGTCGTAGGATATACCCATAAAATGCATAGAAGATGATAAAAAATGCATATATCATAACTTTTAAAATGTTGTCCAGCAAGAGAACAGATTCATAAAAAAAAAAAAGAAAAGAAAAATCTGAAACATAAATATAATCTCTGGAAAGTAGGAACATGTACATCACAATTTCTGTGCTCCAAGCATACCGCCTTTTTTTATACACAGACGCGAGCAAACG TCONS_00245947 TCONS_00245947 r 5' 0 TCONS_00245947 TCONS_00245947 r 5' 0 EMBV3_38487 GCTCACGCTCACCAGTCATTAAGGGAAATGCAACTTAAAACCATGATGAGATACCACTGC Gene BVV0102_051505 + 0 NULL GK000018.2:19166135-19181971 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32877 TGCCATTCAGGTACTGAGTTCTTTTCGGCGGAAGGTCAGGATGTTAGCAGAGCCGGTCAA Gene GeneID:538481|TET2:XM_002688092:151_cdna UTR3_Alt 2 NULL GeneID:538481 6 GENE TET2 NULL tet oncogene family member 2 EMBV3_35754 TCTGTGGTTTGTGACTTTTTCTTCCATACATTAGTTCCCATCACCGCATGCCCAGGGGCC Gene GeneID:777786|LOC777786:NM_001078161:26_cdna UTR3_Alt 1 NULL GeneID:777786 5 GENE LOC777786 MGC148371 hypothetical protein LOC777786 EMBV3_08286 TTGTGGAGTGGTTGGGAAAAGTGGAAAAGGGCAGTGAGCTATGAGTGAGGAAGACACCAG Gene GeneID:515608|PEX11A:NM_001075721:114_cdna UTR3_Alt 1 NULL GeneID:515608 21 GENE PEX11A MGC140644 peroxisomal biogenesis factor 11A EMBV3_10061 GTCTTTTGCAGGGAACAGTGAAGTGCTGGAGGCACGTCTGACTAAAGGCAGTGTTGTAAC Gene BVT0102_175911 - 1 EMBV3_02500 GK000022.2:17735890-17817625 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13845 AAGTTAGAGGTCAAGGTTTCTAGAGTGATGCAGAGCATGGAGATTCCCCCGAGGGCTAGC Gene BVT0102_059875 - 1 EMBV3_04835 GK000005.2:115060314-115084015 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31892 GGCAGCTCCGCGGCGGCGGCGGACGGAAAGCTCTTGAGCCTAGTGGGCCTCTAGGCAAGA Variant GeneID:508617|MGC127874:NM_001034325:224_cdna 201^400 4 EMBV3_19211 GeneID:508617 10 GENE MGC127874 NULL hypothetical LOC508617 EMBV3_01080 CTGATAATAATCATAGTAAATCTTTAACATACTACCTAAAGGGAACCTGCAATAATCTTG Gene GeneID:100295249|LOC100295249:XM_002687232:91_cdna Constitutive 0 NULL GeneID:100295249 5 GENE LOC100295249 NULL similar to homeobox C8 EMBV3_18421 ACTCAAATGTTGTTATCTTTGGTGTGCCCCAGATGATGGCGCAGCTGGAGAAGAAGCTCG Gene GeneID:525138|LOC525138:XM_002696439:71_cdna Constitutive 0 NULL GeneID:525138 20 GENE LOC525138 NULL similar to CG3337-PA EMBV3_36129 TATACAAATGAGAACCCAAATAACTACCAAAAAATGTTTAAAGTGGAGAAGGTGAACTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35441 GTCGAAGCGGTGCTGGGCGCGCTCCCCTTCCTCTCCGACGCAAGACTGTCCCGGCCCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01434 ACCTGAAATCTTGAGACTTATGACCCTGTTTGTGCGGTTCCGGAGCAGTAGCATCCTCTC Gene GeneID:516011|MEI1:XM_002707822:33_cdna Constitutive 0 NULL GeneID:516011 5 GENE MEI1 NULL meiosis inhibitor 1 EMBV3_37782 ACCTTAAAAGATTCAGGTGGTCTGGCCGTAATCACCGAGAGAAGATTGGGGTCCATGTCG Gene GeneID:517349|USP49:XM_002697238:418_cdna Constitutive 0 NULL GeneID:517349 23 GENE USP49 NULL ubiquitin specific peptidase 49 EMBV3_36507 TGTTCTCAAGCCATGGCGCGTCTGCTCCCCGCTTCCAGGAATGTCATCAGACCCCGGAGA Gene GeneID:786474|PNPLA3:XM_002707823:110_cdna Constitutive 1 NULL GeneID:786474 5 GENE PNPLA3 NULL patatin-like phospholipase domain containing 3 EMBV3_17276 CTACCAACAGAGAAGCTGATAGTTTCCTCACACACAACTAGACCCCAGCTGCTTGCCAGC Gene BVT0102_142713 - 1 EMBV3_30835 GK000025.2:36411893-36421450 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147070 TCONS_00147068 TCONS_00147069 TCONS_00147067 1 XLOC_089286 Coding TCONS_00147067 XLOC_089286 Coding Coding POP7 25:36418271-36422331 j TSS109824 3889 3 TCONS_00147067_2 140 0.101311391103111 2 0.0423749692042374 8.29917434456088e-09 1.99109986137465e-08 2.40770139574941e-07 5.60177377432841e-11 0.000174617818367369 5.47162064137115e-05 5.3229506009673e-05 5.28106282824695e-11 0.000747953254454642 9.54735320628888e-05 1.08705949437395e-11 1.13116448618032e-06 0.000148228232179215 0.000318837230805321 0.000109448045698357 1.4040413033626e-05 5.21158145948436e-06 0.000251904901926035 0.000132738922426506 0.000891296835423756 0.000203243869746998 1.32528296251125e-09 3.21474945940455e-11 8.57538115180924e-11 4.22130586834134e-08 2.62838230714513e-05 0.000123401503454568 1.54575708829379e-05 7.08846897786954e-06 1.46867075940781e-05 XM_005225219.1 POP7 PREDICTED: Bos taurus processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae) (POP7), transcript variant X2, mRNA. 0.0 1281 100.00 0.182309076883518 NM_005837.2 POP7 Homo sapiens processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae) (POP7), mRNA. 0.0 641 80.99 0.173566469529442 TCONS_00147067_2 sp|Q0II25|POP7_BOVIN POP7_BOVIN Ribonuclease P protein subunit p20; 3e-100 288 100.00 0.992857142857143 2 coding 0 0 0 0 -1.39465390123737 0.0236883338404923 -0.0201080092875089 0.839789131499877 GTTGTAATGAATGTCCGCGAACTGAGGGGCACACAGCATGGCCGAAAACCGAGAGTCCCGCGGGACCGTCGAGGCGGAGCTGGACCCGGTGGAGTACACCCTGCGGAAGCGGCTTCCCCACCGCCTGCCCCGGAGGCCCAATGACATCTATGTCAACATGAAGACTGACTTTAAGGCGCAGCTGGCCCGCTGCCAGAAGCTGTTGGACGGAGGGGCGCGGGGTCAGAACGCATGCAGTGAGATCTACATTCACGGCTTGGGCCTGGCCATCAACCGAGCCATCAACATTGCCCTACAACTGCAGGCGGGCAGCTTCGGGTCCTTGCAAGTGGCTGCCAATACCTCCACCGTGGAGCTTGTCGATGAGCTGGAACCGGAGACTGACTCACGAGAGCCGCTGACCCGGATCCGCAACAACTCTGCCATCCATATCCGTGTCTTCAGGGTCACGCCCAAGTAACTGAGATGAAGCTGGCCCACCTTATCCACCCATCCCCATACAGCTGGGGCTCAGATGTGGCTCTTCTTGTCCTGAGTACTGTCATGGATCTTTCAACCAGAGCCATGTAGGAAAAAGCCCATCCGCTGGCAGCCCGGAGGACTCTGAATTGAGAGGGCAATTACCGTCTTTTGTTGGGCCCAAGCAGTGGGTCTTCCTGGATCTTTGTGGTCTGTAGCCATTGTCCTGTACAATAAAAAGTTTCAAGTTATGTTGCTGCCTGGCCACCCACCCCGCTGCACTGCCTCTCCCCTGTGTAAATTCTGGAGAGGAGAGTAGGAAGAAACTTGACAAAGATTTAGATACAGGAGGGGAACCCTGGTGTTTCCTGCTTTCATAGAAAGAACATAAATTGTCCTACAGACACTGCAACATAAGACAAACGTTAGTGCAGTGCAGAAGCCTGACAGCCCCAGTGTTTGTTTTAAAATATTTCATCCTTGCAGAAGAAGGCAGAGAGAATAAGTAGATATTCTTGCCTGCTGGCAAGCAGCTGGGGTCTAGTTGTGTGTGAGGAAACTATCAGCTTCTCTGTTGGTAGTTCCTGGGCACAGGAAGGATGAGGGCTTAAGGAGAGAGAAACACAAAGATGGAGCCTCCTTTGTATTAGGTTGTGGGAGGGATTGACACGGCTTCATTTGATCCCTGGTCCTGGGGGATCCAAAGTGTTCTAAACAGCTGTGGTTCAGACCCCTTCACACCCTGTGGCTGGGCTGTTCTAAGTGGGAAAGAAAAGCCTTCCCTCTGACTTACTGGGCACACAGGTCATAAGCACTTATTTGCTTGGATATTTCTAGGAGGATCTGATTTTTCGTATTTATCAAACGAGTCGTCTAAAGCAATGTTTATCAGAGCAGTTGATGACCCATATGTGGGTCTTGATTTACTAGGTCAAAACCTTTTTAAAAATCAAGTAAAAAGTAACTTCCATGGTAATATTTTGTTGGCATTTTTATAGATATGTATATAGATGTGTGCTAGTTATGACATCGATTTTACTGTTGGGGGAGGTCACAAGAGCTTGAAAGACTTTGATTTAAAGGTTAGTAACTGAATTTGGTTCTAGTTTGCTTGAAGGCAGTTTGGTTTGGGATTCTGAAAAACAGCCTTCTCATTTGGCAAAACCTCTCCCTCTGGCTTGAAGGTTCCTGCTGAGGAGGGACTCATGCTGTGGAAGTGACTGCCAGTCGCACAGGAAAGCAAACTCTTCACAGAAGGACTGGGGCTTCGTTCTAATGACTAAACACAGCCCAAGTGCCTTCTGTGAGCCACAGACCTGGGCTGGGCCCTGGGGATACAAAGGTGGGTATAAAATGGCCCCTGCCTTCAAGGAGTTCACCATTTAGTTGGGAAGGTGGATATACCAGTTTTCGTGCAGTGAATAAGATGTGTGATGTAAGAGGTAAGAACAGCCACAATAGAGAAGTGCAGAGAAGGAAATGGCTAACTTCCTGCTGAGGTCTGAGATGGTTTCACCTTTGACCTGGGTTTTGAAGTATGAAGAGGAGTTTGCCAGGCAGAAGAGAGGGGAGAGGCCACATCAGGCAAAGGCATCAGCGTGTACAAAGGGGATTCACTAACAGGGTGTGTTGTAGGACTGGAGGGTCACTCGGCAGCTACAAAGTAGGAAGCATTGGGGAGATTTGACGGAGACGATTCTATCGGATGCCCCCAAATCCCCCCATCCCAATTTCCCTATCAGCCTTGACTGCAAGGCTCCCTTGCCCAGGAGGCCCCAGTAACGGGGGAGCCAGCAGGGAGCTGGCGGGAGTTGTGTGTGTCCTTGCACGTATGTGCTCTGGTCTCTGTGCTCCTGGCCCAGGCCCAGCAGAGGTGGTAGCAGCAGCCCTTTTGCATTTGGTTTGTTTTGGCTGCCACATCTTCCAGCTTATTTGTTGTTTCTGCTCCATATTCTCTCACTGCTTGCCAGTGGGGCTTCCCTCAGTGGCAGAAACAGCCCCTAGACATTGCCACCGATGGGGCAGGTAGGGGGTGTGGGGAAAGTGCCTGCATCTGTCCGAGTGCACGCCTGGTGGATGGGGCAGGGAGCTCTGCAGGGAGGCCACCAGCCACCTCAGCTCCCCCGCCCTCTGGGTTCTCTGCAGTGTCTTCCATCACAGCTTGGGAAGCTGGAAGGTGACGGGGGCAGAAAGGATGTCCAGGTGCAGTTCCCCTCCCTTCTTTTTGCTCAACAGCTATGGAGCCCACAATGAGCGCAAAATGACCTCCTACTTCAAAAACAGTTCCCCCAAGGTCAGATTTGAAATGCTTGTCTTGGAGGTGGGAGTAGACCTCATCTCTAGTGTTATTGAGAATTCACTGCTTGTGCAGAATCTCTGTTAGGCACCAGGTCTGCCCAGAGAGGTACGAACCCCTGGGCCTCTAAAAACTAATAGAAAAAAGGACAGACAGATTTGGAAAGAATTAATTTACATAGTGCTTGGAGCCTGGCATTAGCAAGGGCTCCAGAAAGAGGGGAAACTGTTGGTAGTGTGAGTCATTTTGCTAAGGAATAGTTTGGTCCTCTACATGGGGATGGGGAGAGGGGAAGGAAGGTGGTTTGTGTGTGTTTGATCTACAAGGCTGGGTTCTTAGTCCTGCTGGCTTTTACTTTTGTGGCACTGGCGGCGGGAAAGAAGACGGGCCCTCAGGACCCAGGAACTGGTGTGGATGGGTGGATGATCCTTCTAGGAAGTTCCTTGCACTCTGTCCTGGTGAGTTCTTGGTGCTTGGTCAGGAGCCGGGAGAACAAACCCTGGAGCCTATGGAGAAGATGGACTAGAGGCGTGTGTAAATGTAGTTCTGAAGGGAAGAGATGACCCACTGCAGGTTTGGGGATGAGGCAAAGGTTATCCCACCAAGAGAGAAGTCTATGAAAATGACCACTTAAGACTCCATCTTCCTAAATGACACTTATGGGTGCTTTTGAATTGATGTTTTATTTTTGTTTGGACAGGAAAGCTACTGCGGCCAATTTAGCAGCTCTGTCTTCTGGTAAAGGATGGGAAGGACATGGGTAAAGGACATCCTTCCAGTAAAGGGTGTGTGAAGGAGCTTGGGAACATTCAGCCGTACCTGAGAACAGGAGATCCTAGGATGTGGCTGACGCTTCACAGAAACCTGAGCTGGGGAGGTGCATCTGGAGGTGGAGGTCTTGGTGCTTTGCGTGCCCTCCTGCAAGGACTCAAGCACTGGGGGAGAGTCGAGACTAGTAACCAAAGAAGGTGGCCTGGTAATGCTTCAGGGCCTGTCCAGGGTGCGCCCAAAGGCCTCATTCAGTTCAGGGTCCTTGGGATGTCTCTGGGCCTCCCTTGGGAGGACACCCATGTTAAGGGGACAAGAAAGCCCTGGTTGTCTCCAGGCTTTGAATAAACTGAGTGTGAGCATTGC EMBV3_19301 TGCAGACCAGCTTCACATTCAGCCTCCCGTTCTGCAGTTCCAACCACATCAACCACTTCT Gene GeneID:530175|LOC530175:XM_002686612:120_cdna Constitutive 0 NULL GeneID:530175 3 GENE LOC530175 NULL similar to olfactory receptor Olr1347 EMBV3_40689 TGTTATTTCTATACTCTGTCGTGAAGAAGGGTCTCAGTCTTGGGAGGAGCTCGGAGGGAG Gene GeneID:538990|DBC1:NM_001015669:3_cdna Constitutive 0 NULL GeneID:538990 8 GENE DBC1 NULL deleted in bladder cancer 1 EMBV3_06119 CCTCAGCCTTACTTGAACCTTTGTGTATACCAGCGTAGTATGACAGGTATTGAAAACTTC Gene GeneID:281998|PRDX3:NM_174432:5_cdna Constitutive 2 NULL GeneID:281998 26 GENE PRDX3 NULL peroxiredoxin 3 EMBV3_32428 TCCGTAAGGCTCCCTAGTGTGAATGTTCCATGATTCTGTTTCCCTGTGCATAGACACCCC Gene GeneID:537330|WNT10A:NM_001099078:110_cdna Constitutive 0 NULL GeneID:537330 2 GENE WNT10A MGC159761 wingless-type MMTV integration site family, member 10A EMBV3_35221 CCCCTGCCCTGAATCTGAGCCAGCACCATGCGCCAGGCTGGAGAACTGGATGAGTCAGTG Variant GeneID:516619|RABGGTA:NM_001015614:161_cdna 129^239 1 EMBV3_12176 GeneID:516619 10 GENE RABGGTA MGC134349 Rab geranylgeranyltransferase, alpha subunit EMBV3_43395 CTTGGCAGTCCAGTGGTTAGAACTTGGCACTTTCACTGTCATGGCCCTGGTTCAATCCTC Gene BVV0102_096597 + 0 NULL GK000013.2:72924661-72939568 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043829 TCONS_00043828 1 XLOC_026041 NonCoding TCONS_00043829 XLOC_026041 NonCoding NonCoding LOC100847391 13:72931355-72935570 = TSS32336 786 2 TCONS_00043829_1 46 0.418575063613232 3 0.814190792596108 1.73098790842886e-05 0 0.000341491791392441 0.000306387035948932 3.14062132743895e-06 0 0 0.000203177421831309 0.000186405638834856 0.00126058646970723 0.000183232492291122 0.000330131743206461 6.98423809979779e-06 0.000393766740650015 0 0.000980865687697922 0.00109836934960557 0.000145005435235867 0.000255647506032991 0 0.000121788039934548 8.73767347053578e-05 0.000128389796643488 0.00157592571096697 4.88717933825067e-08 8.96358415482259e-06 0.000318073532913039 0.000414033246689087 0.000384899202741976 0.00465695498427864 NM_001105398.1 CYB561D1 Bos taurus cytochrome b-561 domain containing 1 (CYB561D1), mRNA. 2e-20 104 79.03 0.148854961832061 0 noncoding 1 1 1 1 -0.231290717826549 0.539332736700427 0.0784994947786447 0.13315395704663 CGCGGCGCCGTATCTGGGGCGCGTCCCTGAAAGCCGGCGGGCTGAGACTCAGGCGCCGGCTGCGAGGTTTACCCTGCCTGCCGCCTTCCGCCTTTGTTTACTAGGTGGGGCGCTTCAAAACTGGTCACGTTTCTAATTCCCTGTCACTCGGGGACGCCAGGGACTGCCAGGTGGACTCCAAGGCCTGATTTTCCCTGTCTTCACAGAGAAGAGCGATGTTGCCTCCCAGTGCGGCCCCGGATCCTGGCAGGGCTAGCCGGTGCCTCTGGACTAGGCCTTGGTGTTCGTCGTCCCTTCCCTCCCTGACTGTGTGCTCTAGCTCCGTAGTCGGTGACTTCTTCCTGCTTGATTGCTGAACTGCAAGTGGCCACGTTACAAAAGGAAGAACTAAGTGTTTGCGAAAGCTGATGCCCCAGAAGGCACAGGTTACCTGTTGGTGGACATTGAGGTTGCCTCCAGTTTGGGCTCTTACAAATAAAACTATGTGAAAGGCTCTGTGTGGACATGTGCGTTCACTTTTCTTGGCTCCATATGGCATTAACAGGAAATTCCTTGGCAGTCCAGTGGTTAGAACTTGGCACTTTCACTGTCATGGCCCTGGTTCAATCCTCGGTGGAGAAATAAGATTCCACAAGCCACGAAGAGTAGCCAAAAACAAAAAGCGAACAGTTTCTTGGCTCCTCCCTTACTTCTTCAGAACAGTCCCCTCGGAGCTATCTGAGAGGCTGTATGCCAGTCTTAAGTCCTCAGTAAGTCTGCTGAATAAAATGTGATTCTCGACTTTTA EMBV3_14390 CTGGGGACTGCCTTCTAATCCAGTTTAAAAGTGACAGAGGAAACCTGTCACACTGCTTCG Gene GeneID:509050|C21H15orf40:NM_001075386:99_cdna Constitutive 1 NULL GeneID:509050 21 GENE C21H15orf40 C15orf40 MGC128518 chromosome 15 open reading frame 40 ortholog EMBV3_29484 CGTACTCTTCATTACTATAAATATTTCATTTCCCATTTGATAAGCAAAACCTACTTCTAG Gene GeneID:781239|PLCXD3:NM_001103304:5_cdna Constitutive 2 NULL GeneID:781239 20 GENE PLCXD3 MGC152172 phosphatidylinositol-specific phospholipase C, X domain containing 3 EMBV3_06727 GAAGGTGCGCTGACCGGCCGTCCCGCTGTGGCCCAGCGGCGGTGAGCTGCCAGGCGCGCA Variant GeneID:280977|ACP1:NM_173978:8_cdna 497^863 5 EMBV3_01787 GeneID:280977 Un GENE ACP1 MGC128334 acid phosphatase 1, soluble EMBV3_09514 CATGTCCATGAAGGAGGTGGACGAGCAGATGCTCAACGTGCAGAACAAGAACAGCAGCTA Gene GeneID:281555|TUBB2B:NM_001003900:184_cdna Constitutive 0 NULL GeneID:281555 23 GENE TUBB2B TUBB TUBB2A tubulin, beta 2A EMBV3_27280 GCCTCTCCAGCGCCTTCCTGTACCTCACCAGCACTTGGCCATTGAACAGGATTGACTGCT Gene GeneID:100125945|ELOF1:NM_001105508:264_cdna Constitutive 0 NULL GeneID:100125945 7 GENE ELOF1 MGC148784 elongation factor 1 homolog (S. cerevisiae) EMBV3_21308 ACAGACTACAGTTTTAGGAGTAACAGCTAAGGATGATTTTTCAGAATTGTCACCATACGA Variant GeneID:515302|WDR76:XM_002696812:579_cdna 147^473 3 EMBV3_34579 GeneID:515302 21 GENE WDR76 NULL WD repeat domain 76 EMBV3_36540 CATGATCCCCATGAAGCAGAGCAATACTGAATGTAAAGCCTATATTTTATTTGTATCTCC Gene GeneID:504291|MITD1:NM_001110063:26_cdna Constitutive 1 NULL GeneID:504291 11 GENE MITD1 MGC128843 MIT, microtubule interacting and transport, domain containing 1 EMBV3_31307 CATGGTACTGAGGCCAACCAGGTTAAATGTAGCACCTTATGTTTTCACAGGCCTTCCTAC Gene GeneID:513303|TOM1L1:NM_001075611:20_cdna Constitutive 1 NULL GeneID:513303 19 GENE TOM1L1 MGC142395 target of myb1 (chicken)-like 1 EMBV3_36306 AGTTGCCCAGCTTGGAGTTGTCTGTCATGCACCAGTGTCCCGTATTATAGCTTAAAGAGC Gene GeneID:506494|MGC159500:NM_001098890:81_cdna Constitutive 1 NULL GeneID:506494 2 GENE MGC159500 NULL hypothetical LOC506494 EMBV3_29566 TTTTTCACGGATGAATTCCTGGCGCGGCTCTTTCTGGACACAGGTTACGAAGAAGAGGTG Gene GeneID:535332|METTL6:XM_002685190:75_cdna Constitutive 1 NULL GeneID:535332 1 GENE METTL6 MGC134616 methyltransferase like 6 EMBV3_41082 GCGAAGCAGCGCCCCGGTGGGGCCCAGGAGGAGCAGCACTATGGATTCCTTCAAGGTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10373 ACACCATGGCTGGTTTCAGATGGGGGCAGCCACATGAGGAGAAATGCCTCTAAAGGAGCT Gene BVT0102_079537 + 0 NULL GK000011.2:3802386-3809670 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026681 TCONS_00026682 1 XLOC_015094 Coding TCONS_00026681 XLOC_015094 Coding Coding MGAT4A 11:3802199-3862610 j TSS19094 8162 1 TCONS_00026681_2 290 0.230213183043372 13 0.865105115047178 0.0010056945637386 0.00102277749153166 0.00110854205998355 0.000185865549416989 0.00061864425307716 0.000329401023626061 0.000644443574292915 0.000277900689209092 0.000607922285068593 5.87125736040537e-05 4.92876341481799e-06 9.03208763134991e-06 8.46887309886693e-05 0.000300094271807101 0.00012009432026513 0.00675652957157815 0.00221356999760582 0.00564750729323463 0.0010982057724401 0.00118895802874003 8.77710083683931e-05 0.00202646044974221 0.00247618080012371 0.00399456012503475 0.00103950374248365 0.00119629543976632 0.000783801783196892 3.85569522977169e-05 6.13136268525361e-05 0.000330767738086596 NM_177520.3 MGAT4A Bos taurus mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A (MGAT4A), mRNA. 0.0 2536 99.72 0.173364371477579 NM_012214.2 MGAT4A Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A (MGAT4A), 0.0 2937 88.33 0.285101690762068 TCONS_00026681_2 sp|O77836|MGT4A_BOVIN MGT4A_BOVIN Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A; 0.0 604 99.66 0.996551724137931 1 coding 0 0 0 0 -1.17473612852282 0.00699138746621456 -0.0260441395840642 0.603832614906154 GGATACTGATTATGTAAATGGTGTTGTAGCCAACCTGGAGAAAGAATTTTCTAAAGAAATCAGTTCTGGCTTGGTGGAAATAATATCACCTCCTGAAAGCTATTATCCTGACCTGACGAACTTAAAGGAGACATTTGGAGATTCTAAAGAAAGAGTAAGATGGAGAACAAAGCAAAACCTAGATTATTGTTTTCTAATGATGTATGCTCAGGAAAAAGGCACATACTACATCCAGCTTGAAGATGATATTATTGTCAAACAGAATTACTTTAACACCATAAAGAATTTTGCACTTCAACTTTCTTCTGAGGAATGGATGATACTTGAGTTCTCCCAGCTGGGATTCATTGGTAAAATGTTTCAAGCACCCGACCTCACTCTGATTGTGGAATTCATATTTATGTTCTATAAGGAGAAGCCCATCGACTGGCTCTTGGACCATATTCTGTGGGTCAAAGTCTGCAACCCGGAAAAAGATGCAAAACACTGTGATCGACAGAAGGCAAATCTGCGAATTCGTTTCAGACCGTCCCTTTTCCAACACGTTGGTCTGCATTCTTCACTCACAGGAAAAATTCAGAAACTCACGGATAAAGATTACATGAAACCATTACTGCTCAAAATCCATGTAAACCCCCCTGCAGAGGTATCTACTTCTTTGAAGGTCTACCAAGGTCATACACTGGAGAAAACTTACATGGGTGAGGACTTCTTCTGGGCTATAACCCCAGTAGCTGGAGACTACATCCTATTTAAATTCGACAAGCCAGTCAATGTGGAAAGTTATTTGTTCCATAGTGGCAACCAGGATCATCCAGGGGATATTCTGCTCAACACAACGGTGGAAGTTCTGCCTTTGAAGAGTGAAGGTTTGGACATCAGCAAAGAAACCAAAGACAAACGATTAGAAGATGGCTATTTCAGAATAGGGAAATTTGAAAACGGTGTTGCAGAAGGGATGGTGGATCCCAACCTAAACCCCATTTCGGCCTTCCGACTTTCAGTTATTCAGAATTCTGCTGTTTGGGCCATTCTTAATGAGATCCATATTAAAAAAGTCACAAACTGACCATCTCTACTAAGAAACCAACACATTTTTTCCCTGTGAATTTGTTGATTAAAGACAGCTGAGCACGTACCTTTTTTTGGTAACTTGAATTCTACCTCTCGCGAAATCTACTGTAGATAAAATGATTGTCATATTTCCACTTGGAAAATGAATCTCCCACGGATAATTGTATTCATTTGAATCTAAGCTGTCCTCCAGTTTTAACTCAACTCAAACGTTTTACAGTTATGACAGCCTGTTAATATGACTTGTACTATTTTGGTATTATACTAATACATAAGAGTTGTACATATTGTTACATTCATTAAATTTGAGAAAAATTAATGTTAAATACATTTTATGAAGGGGGTACTTTTGAAGTTCATTTATTTTAGTATTATAGACCCTCTTTTATAGATGATCAGGGATTATATATATATAAATATATAAATATACATAAAACGTTATGGAGTTAATTTATTAGAAATACTTAAGAAGTACATATTTTTGTGCAGTAAATTTTTGAATCAATACTTTTTTTGAAAACCAGTTACCTTGCTTTTTTAAGTTCTTTCTATATTTTTCTTTGGAAATGCAAACATTACAAGTTAATGCCATTTTTCAAATGCACTGCCATTTAAGAATGATTCTAGATTGATTTCCTAACTGAAGTACTTTTATAATCACAATGATTCTGAGCAAAATATTTTCAAAGCCGTTTGTCATTCCTTAAAGCCAGGATTTTAAAGACCAATGTCCTTCTTGAGGGTTATTTTACTATACTATGTATGGTGTATAGCCACAAAAAATCAGTCTGATAAATTTTAATGTGCAAGGGTGATGCATTTCAACCCAAATTACCATAAACTGAAGTCATTACATTTCCTCTGATATGTAAAATGACAAACTCTTCTTTCTGTATTAATCTTTGTCTAAAATCCACGAATTAGATGCATTTTCTCTTGAGGCTTTTATATCTGCACTCATTCTGAGTTCTGACAAAATGTTTTCTAGGTAATGCTGTTGTACGAGTCACAATTGGTTTAATTTTAAAGAAAAATGTAATGGTGGGTTTTTGGTGAAAGGTATTGTAACAGGTGTATGTTTTTCAAAATAATTTATTCTGTTGCAGTATGAACTGTAAGTAAATTCACATCCAGAGAGTATTTATTACTCTTAAACTTGCAATTCCACATGATGTCACTGTACACAAAAATATTATCAGCCTTAGCAGTCAGTGATCTTAAATGAAGTCTTTTACAAAATTATGAATTATCAACATCAGTTCCCAGCCACTGTGGTGTCCTCAGGTGGGTTGCAGACAGCTACAGGTGTGCAGAGCTTAAACCCTCTGGGCTTTCCAAATAGCCCATGGCTGAGGCCTTGGGCACTGGAGGTTCTAGCTGGTTGCCTTTAGCTTGGAGAAGTGTCACCCATACCCAGCAGGCTGAACAAATAGCTTTCAAACAGCCTTATTTTCTGTACAGGGTCATGCAGTGAAAAGGATGGAAAACACAGATAGGGTACAATTTTTTCCATTACTTGAATGGTTCTTGATTTAAAAGTTACACGTTGCCAACAATGATTATTTTTATGTCAAAGTCTAGTTAAACATTTTCCTCAAGGTTTTTAAAATTTACTTCGTATTTTCTTTAATTTACCTTTTCTTCCCAACTCTCCTTGGCCCAGTGCCTGGCAGGGAAATTTCACTGGAAAAGCATAGCCTCTCATTATAAAATATTGGAACCAGCTTCACATACTAAATTGCTGCTCTAACAACCAAGTGGCAGGAGGTAAAAATCTGGGGGTGGGTTTAGAACCCCCTTGTTTCTCTGCTTCCCGAGTAGCCGACTGTGACCTGAGGAAGAAAGGCCATGCTCTGAGAGTCCGAGGAGTGGCAGTAACTGCAGCTCCTGGCCCTTTGTCAGGGTGCATGTCTTGAGACTGAGCCTTATCCAGGCAGCTCTGCAGAGCTGAGGGTGAAAACTTATTAGCTCATCCCTCCTGTTCCTAAGAAGAGTTTTAGCCACATCTTGTCTTTCAAGGACTCCCTTGTGCACCCCTTCCTTCCTGTGAATTTGTTACCAGCACCTCATTGAGCCCAGAACACTGCCTGACACACGGCAGGTACCCAGGCAGGGTCTGCGGGAAGGGACCAGCTCTTCCAGCCCACACTCCTCTTCCTTTTCCTGAACTCTCTTCAGCTGCTGTCCTTGCCACACACTTGCACGCGTGCGGGCACACACACGGTCTCAACTGTCTAGTTTCTGTTTGTGGGGTGTGTGTGTGCACAGACATGTACTCACTCTGACCAAATGTCAAGCTCCCGTGGGCAAGCGTGTACGTCATGCTTCCTGTCCATCCCCTGTTGTACAGGTGTCCATGGAGCCTCTTCTCTGCTGAGCGCTCCTCCCCTGGTTTCCACTAGACAATTAGAAGCTTGCCAAGAACAGGCAATTCTGGTGGTTGCCCTTAAGAATCAGGTTAGGGACTGAAGTATTGGGACAGAAGATTAGGGAACTTGGAACAGAGAGAAAGTAAATGCTTGACCTTGAATGGATGCTGAACCACTTTTGCCCAAAGAGTGAGTGGGGAAAAGTGTGTCAAGCGGTGGGACTAATTTTACTTTTCTGTGTGTCTATGGCATGCTGTCTCTGGAGCCCTGCTGTCCTCTACAGTAGCCACTGGACAACCGGGCAGCTACTTAAATTAATAAAACATTCAGCTCTGTAGTCACACTGGCCCTCCCTATGGCTAGTGGCCACTGGATCGAACAGCACAGATGTAGAACATCTCCATCATCCCAGAAAATTCTGTAGGACAGCACTGTGTCAAGAGTGCTAATATTAACATTTTAGAATTCAGAATAATGAGTTGCAATCATGAAGCTAAAAGCAGACATGCAGAATATGTCATAGTGTAAATGATGATGAGTATTTGCAGGGAGAAGAGAAAGTTGAGGACCTATTTCCAGGTTCCTGACATCCAGTTCTAAATTCCTTGCTCTCAGTCTCATGCGTTCTTTACGGCATTCACTGTCTCTGCTATTGGAGTCCAGTTAAGATCTACAACTTTAAGTTGAGGTTCCAAAGCTTGTGATTGACAAGCTTTGGAAAACACGAATGCACGTGGCTTATTTAGCACGCAGGCTCTAGACATGTATGTATAGGTTAATTCAACTGTTGGAGATATCTTTTATAGCTTTTTTAGATCAACAACTGCATCAGTAAATAATTAGGAAAAACGTCAGCAGTGCTGTGAAGTCTTCTCTTAAATGTGTCCTGGTAATGAAAACATTGTCTGCTCACAGTGCTGTCCGTGGAGCCAAGGGTGATTATATGCAAACAGCATGTTTGGAAAGATTGCTCTAATTGATAGCAGTGTGTATTTGTAGCAGCCAGACTTCTGTGGATGACCCCCAGTGACTTTAGATTTTGAGTGTATGTGAAACCTGTGATTATGACCCGTAATTATGTTGTACAGCAAAAGGGAGATTATCTGGGAACAGCTAGCCAAATCATGTGGGCCCTGAGTTTTCTCAGGCTGTCAGCAGAAGTCAGAGATTCAAAGCAGGAGGACTTGAGACACCATGGCTGGTTTCAGATGGGGGCAGCCACATGAGGAGAAATGCCTCTAAAGGAGCTGAGAGGCCCTAGCCGGCAGCCAAGGGAATGGAAACTGCAGTCCTGCAGCCGCAGGAACTGAACTCAACCAGCAATCTGAAGGAGTCTGCAGATGGACTCTGCTTCAGCAGCCAAGAGCCTGGTCCCCACCAGCACCTGGATTCCAGCCTTCTGAGACCTTGAGCAGAGAGCACAGTCCTGTCTGCCTGGACTTCTGGCCTCCAGACCTGTGAGATAATAGATGGGTATTGTGTTAAGCTTTTAAATTTGCCGTGATTTAATGCAGCAATAGAAAATGAATATGATATTTAAAAGAGGTGAAGCAGAAAAGTCTTCCTACTTGATTCCTTTGGTGTGTTATTTTTATTTTTTAAATTGGAGGATAACTGCTTTACAATATTGTGTCGGTTTCTGCCATACATCAGCATGAATCAGCCACAGGTATACCTATGTCCCCTCCCTTCTGAAAACCCCTCCCACTCTATCCCACCCCGCTAGATTGTCACAGAGCACTGGCTTGAGTTTCCTGAGTCATAGAGCAAATTCTCACTTGCTGTTTTACGTATGGTAATGTACGTTTCCATGCTGTTCTCTCAATCCGTCCCACCTCCCCTTCCCCAACTGTGTCCACAGATCTGTTCTCTGTCTGCATCTCCATTGCTGCCCTGCAAATAGGATCATCAGTACCATCTTTCTAGATTCCATATGCATGCATTAATATACAATATCTGTCTTTCTCTTTTTGACTTACTTCACTCTGTATGATAGACTCTAGGTTCATCCATCTCTAGGACTGACTCCGATGTACACTTTTTTATTTAATAGCTGAGTAGTATTCCACTGTATATATGTACCACAATTTATTTATCCATTCATCTGTTGATGGACATCTAAGTTGCTTCCATGTCTAACTATTGTAAAAAGTGCTGCAATGAACATTGGGATTACATGTGTCTCTTTCATTTATGGTTTTCTCAGGCTATATACCCAGTAGTGGGATTGTTGGGTCATGTGGTAGTTCTGTTCCTAGTTTTTCAAGGAATTGTCATACCAGCTGCATCAGTTTACATTCCCACCAACAGTGCGAGAGCGTTCCCTTTTCTCCAGATCTTCTCCAGCATTCATGGTTTGTAGGTTTTTTACTGAAGACCCTTCTGACTGGCATGAGGTGATACTTCCTTGTAGTTCTGATTTGCATTAATAATGAGCTATGTTGAGCATCTTTTCATGTTTGTTGGCCATCTGTATGTTTTCTGAGAAATGTCTGTTTAGGTCATCCGTCCATTTTTTGATTGGGTTTTCTGTTTTGGAGCTGCACAAGCTGCTTGTGTATCTTGGAGATTAATCCTTTATCAGTTGTTTTGTTTGCCTGTTGTTTTATTTCTCCCATTCTGAGGGTTGTCTTTTAATCTTTATTGTTTCCTTTGCCATGCAAAAGCTTTTCATTAAGTCCCATTTGTTTACTTTTATTTCTATTACTCTAGGAGGTGGGTCATGGAGAAGCTTGCTGTGATGTATGTCAGAGTGTACTACGTATGTTTTCCTGTAAAAGCTTTATGGTTTCTGGCCTTACATTTAAATCTTTAATCCATTTTGAGTTTATTTCTTGTGTTAGTGTTCTAGTTTCATTTTTTTATACATAGTTGGGTTATTTCTTGATAAACACATGAATAAAGTCTTGTCCTACCAGATTATATATCCAAGTCTCATCTGGGATTCTCTCCCAAAGACCTCAGTTAATTTTCATTGGAAGGTTATTGGCAAAAACCTGCAGCAGCTTAGCAGCGCATTTCATAAAGGAACTGCTAGCATGACATTGCAGGAGCAGGATCCAGTAAGGCATATTTTTCCTGGAATCAGTGTCACTTTATGTTGATTTTGATTGTTCTGAGCCTGTCAGTTGTTACTAAGAATGAATAATGCTATTTTAAATAAGCTATTAAGAGGAAGAAAAGTATGCCTTTGTGTAGAGATCAAATCATCTGCTCTGTATTACTTTATAATCTAAGCACAGATCAAATCCTATATGTGCTAAACAAAGTTTTGTAATTCATTTATTTTCCAAAATACTTTTGCTTCCAAACTGTTAATTGCTGGTTTAATTTTGGTTTATCCATATTTTTTGTGCTTCTTTGACTATATTGCCATAGCCCTGATATAAGAAAAGTTGAAAAGAAAGAAAATGAGAGGCTAAAGTTATCAAAAAGTCAAAGACTTGAGTCATAATCGTATCTGAAGTCCTAAAGGAAAGGAAACATTTCCAAGCTATGGAGCAGTGTTTATAGTGTGTGAGATTTAGTTTGAGAATTGTATATCTTTAATTAGTAATCTTAACATATATATGGCATAACTAATATGCTTCATTTCTTCAATGCATGTGAACCTACAGTGCTGAAGAGACCACTACAAGAGTATTACTAAAAAAAAAAAAAAAACAACAGGCATTTTTTTATATTTATATACCCGTATCATCACTATCTATACAGAAACTTGACTCTTCTTGCCCGAAACACTCGCTTCACCTGTTAGGGTGCTAGCTAGAGCATTTCCAGAGGAACAAACCAGAAAGGGCTGGAGCTTCGGAGTATGAGTGGGCAATTTAGATGTCATTCAAAAAACGTAAACTGAGTGTTGGCCTGGAAACGCTTGTGTGGAAAAACGTTAGGAACTGTGGTGCTAAAACTGTTCTAGAATAAGGATTGTCTGCTGTGGGGAACATTCCATATTCTTGGACTCAAGGAAGGCTGTTTAATTCAGAGCATTAGTGATTAGCAAATTGCCCTGGAATCAAAGATTTGGTACTTGAGTTTGATAAGCATTCCATTATTTGTTCGAAATGCTCAGTTTGCTGAAATTTGGGTGAAAATACCTTTTGAAGACACAGTCTCTGAGCCTTAATGATGGCCGGTGTGGACAGTACTGTAAGATGCACTGCCAGCAGATTTGACGTTTTCAGTGTAGTCGGTCGTGTTTTCTAAGAAAGATTTTAGAGATCAGCTGATTAAATGTAACCATTGTTTCATTTATGGGGTGAAAAACTAAAGCATTTCTCCTTGAAAACAAACTTCGTTTGGAAAGGCTGTCTTTGCGATTGGGGGTGTTTTTGGAAGCACCCCTGGGAGAAGCTGCCTGAAGAACTGCTTTTCCAGGTTGTACCAATGTTTTTTTTTTTTCCCCTGAAATATATTGTACATATTTCCCTTATAACATCTTCATTGGTTGGATTGGTAATAACTGTAGTACTATTTTAGGTCCTGTTGGATTTTCAAAGGCAGATTATTTATTTTCTAATTTGCTGCTAAAACTGAAAACCTGATAACTGGTCCCGTTGACTGTGCCTTCATCACTGTTTCTCTGTGCCACAACCGTTCATGTGTATTTGAAATAAAGAAGTTTAAAAAGCCATGTTGAATTCAAGACTCCTTCTAATAAAAAACAGGTTTCACAAGAAATCACCACCTCACCAATACTGCTGCTCAGATGTAAGGGGC EMBV3_36261 GGAGGGCACGCCTTTTGGGCGATTTCAGTGTAGTGGAAGCTTCATAGAAGTCTTGCCTTT Gene BVT0102_305322 + 0 NULL GK000004.2:119165991-119247414 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185519 TCONS_00185520 TCONS_00185521 1 XLOC_111610 NonCoding TCONS_00185519 XLOC_111610 NonCoding NonCoding - 4:119177874-119180248 - TSS137910 2374 4 TCONS_00185519_4 52 0.0922493681550126 1 0 0.000799459231789159 0.000503690711226156 0.000869141670884982 0.000255350248900508 7.06602105559982e-14 1.8822380766448e-06 0.000596551474311666 0.000519263938547703 0.000120626338515833 7.15542739982e-44 4.32611385244174e-30 0 1.44095936253027e-31 1.5408599102165e-20 0 0 0 0 0.000139394196693482 1.55790319326474e-05 0.00018448386566318 0 0 0 2.16723663414044e-05 1.63242588006469e-05 7.78246841723441e-05 0 3.00555661070668e-31 0 XM_005216675.1 CD55 PREDICTED: Bos taurus CD55 molecule, decay accelerating factor for complement (Cromer blood group) (CD55), transcript variant X5, 5e-22 111 81.42 0.044229149115417 0 noncoding GGGAGGTAGTCGTGGGGAGGGCACGCCTTTTGGGTGATTTCAGTGTAGTGGAAGCTTCATAGAAGTCTTGCCTTTTCTCTCCACAAGGCTGCCTTGACTGAAGTTGTCAGAGTCTCTGGTTGGAAATGGAACTGCCTCAGCTCAGTGCTGCACGTGTGTCCTCTCTCTCGTGAGCACCAGATGCTCAGTATGTCTTAAACGGATTTTTTAAAAAGTAATGCATTATTTTAAATTCAGCTTGGTATGCAAGAATAAGGTCTATAGAGAAAAATGAGAGCAGTCTTTCATGTTGCAAAGTTTTCTAGTTTTTTAAACATTTGTTTGTTTGATTGCACGAGGCCTTAGCTGCAGCACGTGGGATCTAGTTCCCTGACTGGGGCTCAGACTCTGGGGGTGTGGAGTCTTAACCACTGGACCACCAGGGAAGTCCCACAAAGTTTTCTTAAACAGACTAAGTCAGAGAAAATTTATATACAAAGATAAATCTATCAAAGTAGATCTATAATGAACACCAAAATGCTTAGATGACAAATTCTCATTACTAGATATTACTAGATATATTTTGGGAATCAGTGATGCTATCTAAGCATCTCACATGAACTTGAGCAAACTCTGGGAGGTAGTGGAGGACAGACGCCTGCTGCAGTCCATGGGGTCGCAAAGAGTTGGGCATGAGTTACTGACTGAACAGCGAGAACAGCATCTTGGGAATCGGAGGAAAACACAGACAAACTCAAAAAGCTCAAGTTAGATGGCCCACTAACAGTCCGTTCTAGGATTCTCCGCCCTAACAATTCACCCCTCGCTGTTTGGAAAATGCCAGCCTGCATTATGACAGAAGAAGAACATTACTCTATTTAATTTTACTCTAGGGAAATGGATCCTTGTTATCTGAGAACTACTGTGACTTGTGCCCCTAACCTCCCAGGACACCAAGTACCCCCGAAGACACACCGACTGAAATCTGCCTCCTGACATAGAAAGCCTTCAAAGTCTATCCCTCCTCCCCTAAAACACCGAGCAGGAAGAGAGCATGCCTGGGGGTAAGGGCAGCCCTGGCTTTAAGAATGTCCTGTGTACGTGACCAGCGAAGGGAACAGCGTCACAACACCTGGCACCTCGGCCCCCTTTCCAGATCCTTCTCCTTCAACCAGAAGACCCAAGAGAGCACACACGTCAGAAAGCGCCACGGGACTACGGCATGGCTGAGTGGGTTTTCATAGCATTCTGGGCTTCTGAGCCCCTGAAGCCAAAGGCCAAGCCCAGAGTGGCTCCTAGCTTCCTTCGCCGGGCAGTTCTCCTGGCTCTGAAAACGCTTGGTGCCGGGTTTTTGAGGCCTGGCGGCTTTAGGTGAAATGCAAGGTCGGCCTGGGTTGATTTAGTGCTTTATTAGCTGTTTATACAGTACTGAAGCGGCACAGGACGTATGAAAAATGACTTTCCGATCTCAGGGAGTAAATCAGGGCTGCGCGCGATTCCACTTAATACTTAACTTGGGCCAGTAAAATATTACACCTGTTATTATTCAAGGCAAACACAGCCCTTCCATTTGCTTATTGAGGAAACAATTTATTTGAGGACATTTAATTGCAATAGTGAAGCCTGCCTTGGGGGGTTAATCCCAGTTTATCGATGCAATTAAAAGCAGTGTGTGCTGGGTCTCATATTTATTATCTAGAGGGAGAGTGTTGACACAAGCCGGTGTTGAGCCCGGCCGCCCCAGAGCATCTGGGCTGCGTGAGGTGTGAGTTGCGGGCTGCTGGCGTGTGTCCGGGAACATCACTGTTTGTGCTCCGCGTAACCTGAGTTTGCATAATCTAATTGGGGAAAGGCTTCTAATATGATTTTACTTGGGGCGATATGGGTTCGAATGGTCATACGGATCCAGCGCTGTTTGGTTTCTTGTCAATGATTCATGGCATCTCAATGCCCCCCCCAGACAAACACTAAAGCTCGTCACCTCACATTTGGCAGCAGGCCTCTGTCACCTTGGCCTGTAGCCCACCCCCGACTCCTTCCCCAGCCTCAGGATGTCTGTCCTTCTCCACCTCCAACGTTATTAGGTCTTGCCTAAGTCGGTTCCCGGCCGCCTGCCCTCTCGAGGGGTGACAACCTCCTCACAGCTTGGAGGGACCTGTCTCCCGGCGAGCTGTTCTCAGATGGGGTTGGGGGGTACGGACAGGAAGCCACCTGCTGCCCCCACACCACCCCCGACCCGGGGTCAGCATGAGATGTAGTCAGTTCCGAAGACCTTGAACATCTCTCTCCTTTCCCCCTTTTGGTTACTATCTTCATTTTCTTGATCGTATTTCTGGGGCTTTTCTTTGGGCTTCCACATTTTTCTCTTTAACTGTCTGTTTAATACTTCCCTCCC TCONS_00185515 TCONS_00185516 s 5' 11885 TCONS_00185515 TCONS_00185516 s 5' 14258 EMBV3_12037 TGAGCTGGGAGAAGTGGTGAAGGGAGTGAAACCAGCCCACTGTGAGAAAACTACCGTGTT Gene GeneID:505167|CRYM:NM_001045914:320_cdna Constitutive 0 NULL GeneID:505167 25 GENE CRYM MGC137343 crystallin, mu EMBV3_20622 GAGAAACTGTTGGTCTGTCACGTCTTAGGGAGAGGGGAGTGGGACCTTTGGGTAATAGAG Gene GeneID:516885|ZKSCAN5:XM_002698214:790_cdna UTR3_Alt 2 NULL GeneID:516885 25 GENE ZKSCAN5 NULL zinc finger with KRAB and SCAN domains 5 EMBV3_17846 CTCCTCCAGGCGTATAAATGGTCAAACAAGATATGTTGACGACGTGATTAGCCGCATCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19864 CCAGAGGAGATACTCTTGGAATGTAAAGCGAAGTGCCGGTCAAGGAGGCCCGAACAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43638 GCATTGGCATCACGCCCTTTGCCTCCATCCTGCAGAGCATCTTATACAGACACCAGAAGA Gene GeneID:531303|NOX5:NM_001101137:188_cdna Constitutive 0 NULL GeneID:531303 10 GENE NOX5 NULL NADPH oxidase, EF-hand calcium binding domain 5 EMBV3_22325 CAGCGACAGAAGCAGCAGATTCAGGGGCCAGCAGGCTGCAGCAAAGTGTTACTCACCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14948 GAGGCAAGAATATACAATGGAGAAGACAGCCTCCCCAATAAGTGGTGCTGGGAAAGCTAG Gene BVT0102_385061 + 1 EMBV3_17378 GK000017.2:21940787-23530458 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13959 CAGTATGCAGGATCTTCCCTGACCAGGGCCTAAACCTGTACTCCTGCACTGTGAGCACAG Gene BVV0102_106092 - 0 NULL GK000019.2:63243063-63283191 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12083 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17758 CCGGCCTCCTCTACGCGCTGGTGCAGCTCGGTTGGTGCAGAAGGCGGAGCTGGTGCGGCT Variant GeneID:404162|B3GAT3:NM_205805:34_cdna 129^303 1 EMBV3_05932 GeneID:404162 29 GENE B3GAT3 NULL beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) EMBV3_28486 GTCCTGATAAGAAACTGAAACTGTCCATCCTCTACCCAGCTACCACTGGCAGGAACTTTG Gene GeneID:282438|PRDX6:NM_174643:22_cdna UTR3_Alt 4 NULL GeneID:282438 16 GENE PRDX6 AOP2 KIAA0106 peroxiredoxin 6 EMBV3_06211 AGGATTCAGTATTTTCTGTAGCTGGAAACAGCTATTCTATCTCTTGCCACTATGTGGTGG Gene GeneID:781335|MAP4K5:XM_002690833:148_cdna Constitutive 2 NULL GeneID:781335 10 GENE MAP4K5 NULL mitogen-activated protein kinase kinase kinase kinase 5 EMBV3_14089 GGCGACTTGTCTGTGTGAAGGCAAAATTTACTGAAATGCCCGATTTGCATTGTGTGGGAC Gene GeneID:512443|CRISP2:NM_001038089:267_cdna Constitutive 1 NULL GeneID:512443 23 GENE CRISP2 MGC133685 cysteine-rich secretory protein 2 EMBV3_07021 TCTGCAGAGAACTTTTCTCCTGATTTGAGGCCAAAGATGTAACTTATATATGTCCATTCA Variant GeneID:536810|MTMR2:NM_001102194:17_cdna 109^184 1 EMBV3_28133 GeneID:536810 15 GENE MTMR2 MGC142907 myotubularin related protein 2 EMBV3_36897 GCACAAGGTAACTGTCCATAATCCACACACTGCCAGGTAATCCCATGTCAAGAAAGGATT Gene GeneID:537305|EML5:XM_002691108:23_cdna Constitutive 2 NULL GeneID:537305 10 GENE EML5 NULL echinoderm microtubule associated protein like 5 EMBV3_02215 CATCTTCTGTGAGATGTACGTCCTGCTGAGGCTCGCCTGTTCCAATACCCAGATGATTCA Gene GeneID:540255|LOC540255:XM_002695719:367_cdna Constitutive 0 NULL GeneID:540255 19 GENE LOC540255 NULL similar to olfactory receptor EMBV3_32929 TGAGTGTCATGTAGGGTCCCCCAGGAGATTCTGGAGCAGAAAAGGGGCATGAGTGAAAAA Gene BVV0102_414960 + 1 EMBV3_35889 GK000013.2:58092014-58207118 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39263 GGATCAGATTCTCTCAGAACTTGGCCACACCAATAGGATTTATGGCAACGTGGGGGACGT Gene GeneID:540797|LHX4:XM_002694165:588_cdna Constitutive 0 NULL GeneID:540797 16 GENE LHX4 NULL LIM homeobox 4 EMBV3_05760 GGCCTGCGTTCTATTTGGAGGCTCTAAGGGAGAGTTCATTTCCTTGCTTTTTCCATCTTC Gene BVV0102_100067 + 1 EMBV3_09555 GK000011.2:13248621-13394049 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024106 1 XLOC_014442 NonCoding TCONS_00024106 XLOC_014442 NonCoding NonCoding - 11:13352240-13354653 - TSS17772 1217 2 TCONS_00024106_3 63 0.582580115036976 2 0.496268656716418 0 0.000148621087118712 0 0.000177409360131049 2.43410471141538e-05 5.87848030947473e-06 0 0 0 0 0 0 0 0 0 0 0 2.06170106550738e-06 8.24922042267587e-05 4.13639420315491e-05 0 0 0 0 0.000119554554824629 1.73676364600547e-05 1.92577420505958e-05 0 0 0 XM_005195889.1 LOC101902386 PREDICTED: Bos taurus protein kintoun-like (LOC101902386), 9e-66 255 81.21 0.221857025472473 NM_019018.2 FAM105A Homo sapiens family with sequence similarity 105, member A (FAM105A), mRNA. 3e-28 131 72.27 0.207888249794577 0 noncoding 0 0 0 0 0.0303318016177079 0.807316204962729 0.0152983816538274 0.747465336139684 GAGGGAGAGAAGATGCCTCACTGCTTACTTTAAAGATGGAGGAAGAGGCCATGGGCCAGGGAACGTAGGTGGCCTCCAGAAGATGGAAAAAGCAAGGAAATGAACTCTCCCTTAGAGCCTCCAAATAGAACGCAGGCCTGCAGACATCTTGATTTTTGCTCATTGAAACCTATTTTTGACCTCAAGGCTCCAGAACTTCAAGATAATAAATGTATATCGCTTTAAACAATTAAGTTTGTGGTACTTTGTTAGAGTAACAAGAGGAAATGAATACACTGTGTGACCTTCAACAAGGTCCTTTTGCCAAAGATTTCTTATCTGCAAAATTACTTCCCTGATGGACCAGTGGTTAGGAATCCACCTACCATTTCAGGTGGCAGAGGTTCATTCCTTTGTACAGGAAGCCTCCACGTGCCACTGGACAACTAAGCTCATCCTCCACAAGGGAAGCCATCGCAGTGAGAAGCCCGCACACTGCGACTAGAGAGTAGCTCTTGCTCCCCACAACTAGAGAAAGCCTGCACATAGCAATGAAGATGCAGTGCAGTGACAAATGAATCAAATAATTTTTTAAAGCCAAGAGGTTATTACAGAATATTGAGTAGAATTCCCTGTACAATACCATGTCTGAAAGATTGCAGAGTAGAAGAATGTACACTTATCTTCCCCTGTGAGAACACCGCTAAACAACCATTGACAGGATGATGTTGGAACCCACGAAAAAAAGATACCCCGTCCAAGGACAAAGGAGAAGCCGCAGTAAGATGGTAGGAGGGGTGCAATCATGTTTAAATCAAGCCCCATACCCACCAGAGACTCTTGGAGGGCACAAAGAAAAACCTTGTGTGCACCAAGACACAGGGAAAGGAGCATTGCAGCCCACAAAAGACTGAGCCAGACCTGCCTGTGAGTGTTTGAGGGTCTTCTGCAGAGGCCTGGGTCAGCACTGCAGTACGTGAACACTGGCAGCAGCAGTCCTGGGAGGTGCGGTGTGTGGCATGAGTCCTCTTGAAGGAGGTCACCATTAGCCCCACCATAGAGCTTCCAGTCATCTGAGTTAAATTCACCCATTCCAGTCATTTTAGTTCACTGGTTCCTAAAATGTTGATGTTTACTCTTGCCATCTCCTGTTTGACCACTTCTAATTTACCTTGATTCATGGACCTAACATTCCAGGTTTCTATGCAGTATTGTTCTTTACAGCATCAGCCTTTACT TCONS_00024107 s 5' 2888 TCONS_00024107 s 5' 5300 EMBV3_13088 ATAGACACCTAACCCTACACTCCCGCTGACCGTTTCGGGACCACATCTAGCTTCAGCAGA Gene BVT0102_423294 - 1 EMBV3_30498 GK000002.2:135422029-135557007 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112957 1 XLOC_068852 NonCoding TCONS_00112957 XLOC_068852 NonCoding NonCoding - 2:135453045-135453827 - TSS84578 782 1 TCONS_00112957_1 67 0.471867007672634 1 0 0.00102651769493961 6.42483288365635e-05 0.000958533386645346 0.000138048508770639 0.000404065516679806 9.1484563982469e-06 0.000246094589497967 0.000105890074747434 0.000655829944114017 0.000168368345812878 0 0 0.000286194583390091 5.41380593323355e-05 1.88217645452665e-05 0 0 0 0.000155889722139207 5.51771269372676e-05 0 0 0 0 0.000132899227924724 0.00012613372665385 0.000104895276332186 0 0 0 0 noncoding 0 0 0 0 -0.0649250614063863 0.573697446218086 -0.0138245327941441 0.78970610899137 TTTTGGTAGAAGATAAAGGCTCAGGGAAGCCCAGGTTTGCATGGGATAAAGACTTCCTTTCCCAGCCTCTGCTGAAGCTAGATGTGGTCCCGAAACGGTCAGCGGGAGTGTAGGGTTAGGTGTCTATCCGCAACGTCGAGGGAGGGCCCCTAATGGGGGAAGTGTGCCTTCCTCTGTCCTTGCTCCCATCTGCCAGCTGGAGTCCCACGTCTTGGAACACGAGTATCTTGGAGAAGGAAATGACTACACTGCAGAAACAGAGGGAGACAGAGCTCGACACAGCGGGGCGCCACGCCAGCACAGACCCACCTCTAAACTACTTGAACTTAAGGGTGAATCAACTTCTGTGTTGCTGAAGCCTCTTATTGGGGGTTTTTCTGCATTAATCGTAAATGGATACAAGGACCCATGTATGAGGTCATCTTCTGCAGACCTTATCAACAGTCGGCCTACTGCTGCAGCCTTTAAAGGGTTAAAGGGAACTTCTGGTGTCACTGATCACCCTCTCCAACAAGAGCAGTTCTGCTTTTAAAGACACTTTCTCTGAGGGGGAAGAACTGGAATCTTTACATTACCCCCAACTTCCCCTCCAATGACAACCAGAGCTTCACAGAGGAATTTAGAAAATGTTACATTACTTCATATGGTAGGAAATAAGACATAATGGGGAAAAAAATTCACTGTAAAGAAAAAAGTAGAAAAAAATAAAACGCGATCAGGAAGGCCTATACACACTCGCAGCACTCCGAGCTTCCCAGCAGACAGAGCAAAAAGGGAAACAC TCONS_00107001 . 5' 17914 TCONS_00107001 . 5' 17914 EMBV3_11787 TAATCACCATCAAGCCAAAAAACGTGATGCCTGTCCTGACTGCCTGGAATGTATTCATGA Gene GeneID:516522|FRRS1:NM_001083695:110_cdna Constitutive 0 NULL GeneID:516522 3 GENE FRRS1 NULL ferric-chelate reductase 1 EMBV3_29863 CAGGCCTCGACTGGTGGAGTCGCGGGGAAGGTGCTGAGGCCAAGACTGTTCTGCCCAAGA Variant GeneID:512069|C1H21ORF70:NM_001046108:23_cdna 206^314 1 EMBV3_16096 GeneID:512069 1 GENE C1H21ORF70 MGC137476 chromosome 21 open reading frame 70 ortholog EMBV3_43335 AGTTCCAGATCATCCGTGGGAATTTTCCTTATCTCAGCGCCTTTGGGGACCTCGACCAGA Gene GeneID:512056|RASGRP2:NM_001099946:607_cdna Constitutive 0 NULL GeneID:512056 29 GENE RASGRP2 CalDAG-GEFI RAS guanyl releasing protein 2 (calcium and DAG-regulated) EMBV3_24352 GCAGGGCGTGTTTTCCATTTCTGCTGAGAACTGACCTGTCTGTCAGGGTTAAATGAGATG Gene BVV0102_281108 + 1 EMBV3_38618 GK000019.2:43321168-43360442 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29408 GGCGCTGAAATGGATTAATAAGGAACTTAGTGATTTGGCCCGTGACCCTCCAGCACAATG Gene GeneID:100295980|LOC100295980:XM_002692207:1407_cdna Constitutive 0 NULL GeneID:100295980 13 GENE LOC100295980 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_32146 TGTTGGGATGGAGTGATGACTTCTAAGACCCTTACATGCTGGATTGGAAGCTTGAAGTAC Gene BVV0102_153170 + 0 NULL GK000007.2:41517899-41551824 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212974 TCONS_00212975 TCONS_00212971 TCONS_00212970 TCONS_00212976 TCONS_00212973 TCONS_00212978 TCONS_00212977 TCONS_00212972 1 XLOC_130297 Coding TCONS_00212973 XLOC_130297 Coding Coding LOC511586 7:41529089-41633426 o TSS159646 1382 1 TCONS_00212973_2 279 0.867583212735166 2 0.98677350099678 9.46253119710649e-05 0.000374439985075322 0.000115162221219233 8.83182875574606e-05 3.21462417886871e-05 1.80966042335433e-09 0.000132915163155528 0.000104855329428724 8.99363723538659e-05 0.000952205403663963 0.000634213466805498 0.000685257506710329 2.36612005414788e-06 1.09753583410714e-107 2.80872375975609e-12 0.000346170653938046 4.620822347608e-34 0.00116550593371602 3.76356712161377e-09 1.55125017175606e-09 5.4915100544933e-05 5.52516865670526e-45 0.000705552770691451 7.17873437338013e-05 9.14851351082887e-05 0.000360250941164311 6.39640883956227e-05 0.000163349445799358 5.60642482744278e-10 0.000780551971695847 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 872 90.19 0.458755426917511 TCONS_00212973_2 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-09 59.3 23.29 0.724014336917563 1 coding 0 0 1 1 -0.186814170249326 0.214503391340981 0.0413058057293092 0.400680456441929 TGAGACATGTAGTTTTTCAATGCAGAAGCTCAGTGTGTCTCTCTAAGCCTGGCAAAGCAATAAAGCTATCCTTTTCTGCTTCACCCAAAACTCTTTCCCTGGGATTTGATTCATCACCAGAGTACAGAGATGCTGAGCTTTCAGTAACAACCTCACTTCTCTGATAGATCTAAGAAGACTTGTTGATTTTTCAGTTTGTTCTGCTTTTTCATTTGTTGGGATGGAGTGATGACTTCTAAGACCCTTACATGCTGGATTGGAAGCTTGAAGTACAGCCCCATTCTCTCTGGTCAAGCTTCTGAACCTGGAAAGAATACTTAAAAGTGACAATCTGATTTTCATTGTGGGTGTGACCTATCTGCCATGGTCTTCTATTACCTCTTGGGGAACACCTAGCTATCTTCTTGTGTCCCCAAGACCTCTCCTGTACAATGTCACAACCTCCGTCCATAGCTGTGAAAAGAAGAGAGTCGAAAGGCAAAGGAGAAAAGGAAAGATATAGCCATTTGAATGCAGAGTCCCAAAGAATAGCAAGGAGAGATAAGAAAGCCTTCCTCAGCGATCAGTGCAAAGAAATAGAGGAAAACAATAGAATGGGAAAGACTAGAGATCTCTTCAAGGAAATTAGAGATGCTAAGGGAACATTTCATACAAAGATGGGCTCAATAAAGGACAGAAATGGGATGGACCTAACAGGAGCAGAAGATATTAAGAAGTGGTGGCAAGAATACACAGAAGAACTGTACAAAAAAGATCTTCATGACCCAGATAATCACAAAAGTGTGATCACTCACTCTCACCTAGAGCCAGACATCCTGGAATGTGAAGTCAAGTGGGCCTTAAGAAGCATCACTATGAACAAAGCTAGTGGAGGTGATGGAATTCCAGTGGAGCTATTTCAAATCCTAAAAGATAATGTTGTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATGCCAATCCCAAAGAAAGGCAATGCCAAAGAATACTCAAACTACTGCACAATTGCACTCATCTCACATGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCTATATGTGAACTGTGAACTTCCAGATGTTCAACCTGGATTCAGAAAAGGCAGAGGAACCGGAGATCAAATTGCCAACATCCACTGGATCATTGAAAAAGCAAGAGCGTTCCAGAAAAACATCTACTTTTGCTTTATTGACTATGCCAAAGCCTTTGTGTAGATCACAATAAACTGTGGGAAATTCTGAAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAACTTGTATGCAGATCAGGAAGCAACAGTTAGAAGTGGACATG TCONS_00216681 r 3' 10164 TCONS_00212969 s 3' 11192 EMBV3_38781 CTAGGAGTGTAATTGCTGGGCCATACCCTAACTTTGAGGAACTGCCAGATTATTCCAGGC Gene GeneID:539067|LOC539067:NM_001102224:161_cdna UTR3_Alt 2 NULL GeneID:539067 3 GENE LOC539067 MGC148531 chromosome 1 open reading frame 103 ortholog EMBV3_39852 TCATCGTGTCCGCTGTGTGTCTCTTCTTTCCTTGACACCTGGCTTAGTAGTTCCAAAGCG Gene GeneID:785433|FHOD3:XM_002697676:165_cdna Constitutive 0 NULL GeneID:785433 24 GENE FHOD3 NULL formin homology 2 domain containing 3 EMBV3_32786 CGTGTGCTCAGGATTCATAACAAAAATCCCATTGACTGGGTGGCTTAACCAGCAGAAATT Gene BVT0101_010873 - 1 EMBV3_40102 GK000015.2:34332244-34577487 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061051 TCONS_00061049 TCONS_00061050 1 XLOC_036909 NonCoding TCONS_00061051 XLOC_036909 NonCoding NonCoding - 15:34480825-34488580 - TSS45541 2399 3 TCONS_00061051_7 97 0.86494372655273 4 0.691127160175393 0.000150816807128379 2.54265112539268e-08 0.000148736905012692 4.04694179178679e-05 8.40141424503161e-05 9.2566028617809e-14 7.23395584509193e-05 2.68388346314817e-05 4.45548512557182e-05 7.3769532540612e-06 0 1.81619834609585e-09 3.92843548376432e-06 0.000304252580721194 6.13475146282388e-06 0 0 0 3.53698226265574e-09 4.82977147841159e-05 2.63349627797711e-06 0 0 0 0.000223274040510578 0.000154280089592958 8.51406017247853e-05 0 0 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 1e-124 452 95.71 0.116298457690704 0 noncoding 0 0 0 0 -0.0317200193442584 0.873841704420205 0.0365839467477067 0.434312682361079 ATTTGAGCTGAGACTGAGGTGATGAAAAGGAACCGGACATACAGACATCTGGGAGAAAGTTGTTTCAGGAAGAGAAAACAGAAGGTGCAAAGTTCCAGACTTTTGAGTGAGGTTGGCATGCTTCAGGAACCAAAAGAGGTCCACCTACGTGTCTGACCTACGGCAAGGGAAGTGGATATCTCAGGAGCAAAAGCAAATCTTCTCTGCAAGAAAAATTCTCCAGTCTCCATGTTAAGCCTGCAGATGTTCCATCTATTATAACAAACAGCGAGCTCACAAAGATCAACTAGAAAGAGAAGGCATGTGGGATCTCAACTCCCCAACCAGAGACTGAGTCCACCACACCCCCTGCATTGGAAGGTGAAGTCAACCACTGGACCACTGGGATCCAGCTTTGCCCAGGGATCAAACCCAAGCCGCCTCCATTGGGAAGTGGGAGCCTTAGCCGCTGGACCACCGGGGACATCCCTCTCACTGTCATTTTGATTCAATTTCCCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGCGTCTGACTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGTTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGGGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCCTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTGCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCCTCTCCCTAATGACTAGCAATTTGGCACAGTTTTTCATGTGTATATTTGTCAGATACATATCTTCTTTGATGTCATGTCTGTTCAAATCTTTAGCTCATTTTTCTACTGGGTTGTTTGTTTTTTATTATTGAGTTTTAAGATACTACTGTTGACTGAATTGTGTCCCCACAAATTCATACGTTGAAGCACTAACCCCCTATCCCACTACTTCATGTATTTGGAAACAGAAGTTTTAGAGGTTAATTAAGATTAATGAGGTCATAAGGTTGGAGTCTAAGAATTGGTGGCCTTACACGAAGGTAGTGCCTGGGCCCTGAGGACAGGCTTTGTGAGGACACGGGAAACAGGCTGATGCTACGGGCCAGAAATAGAGTCCTCACCAGCGCTCAGCCCTGCTGGCACTCTGATCTCAGATTTCTAGACTCCAGAACTGAGAGAAAATAAATTTCTGCTGGTTAAGCCACCCAGTCAATGGGATTTTTGTTATGAATCCTGAGCACACGAGATGGATTACATATATCTGATACGTATGGATATGTAGACATACACCCACATGTATGTAACATATGCATTTTTCTTATTACAAGCCCTTATGAGATATATGCTTTGCAAATACTTTCTCACAGTCTCAGGCTTTTCCTTCCATTTTAAAAACTGTTTATAGAAGAACAGATGTTTTTAGTTTTGATAAAGTTCAATTTATTAATTCTTTCCTTTTGGAAACATGCTTTGTGTGTCAAATATAAGAAAACATCGCCTAACTCAAGGTCCCAAAGATTTTCTCCTGTGTTTTCCCTTAGGAATTTTATAGGTTTATGTTTTAGGTTTCAGTCTGTAATTAATTTTGAGTTAATTTGTGTTTCATGCAAAGTATGAAGCAAAGTACAGTGGGGGTTTTCTTCATGTAGAAATACAGTCACTACATATTGTAGCTTTATAATAAATTTTGAAGTCATGTAGTGTTAGTCTTCCAACTGTATTCTTCTTTTTTCAAAGTTGTTTTGGCTACTGTAGGTCTGCATTTCTAAATAAATTTTGGGATCACTGTGATTTTCTTTTTTAAAATATTTATTTTGCTGCACAGGGTCTTAGTTGCAGACTATGGGATCTTAGTTCCCTGACCAGGGACTGAACTCGGGCCCCTTGCATTTGGAGCATGGAGTCTTAACCACTGGACACCCAGGGAAATTCCTCAATTAAAAAAATATATATATCTGCTGGGATTTTGATTGAGATTTCATTGAATATATACACCACTTGGGGGGAATTAACATTTTAGCAATGGTGGGTGTTTCTGATCTTTGAACACAGTGCATGCGTGCTAGGTCACTTCAGTTGTGTCCACCTCTTCAGGACACTATGGACTGTAGCATGCCAGGCTCCTCTGTCCATGGGATTATCCAGGCAAGAATACTGGAGTGGATTGCCGTGCCCTCCTCCAGTGGATCTTCTCCACCCAGGGATCAAACCTGTACCTCCTGCATTGCAGGTACATTCTTTACCCCTGAGCCACCAGGAAAGCCCCTTGAACACAGTATGTCTCTCTATTCACTTAGGCATTTTTGCCAGATTTATCCCTATGTATTTCATTTTTTGAATGTCATGTAAATGATTTTAAAAATTGTTTC TCONS_00058912 TCONS_00058913 r 5' 94649 TCONS_00058912 TCONS_00058913 r 5' 88908 EMBV3_28768 CTGTCCACAGACAGGGACTTTAGAAAGCATCGGAACCGTTTGGCCTACCTAAGCTTGTAC Gene GeneID:617486|C3H1orf88:NM_001076464:350_cdna Constitutive 0 NULL GeneID:617486 3 GENE C3H1orf88 C1orf88 MGC133681 chromosome 1 open reading frame 88 ortholog EMBV3_03323 CTGCAGCAGGATGTGCTCAGACCGACACGGATTTTCCTGTCTTTACATTGGCAAAATGAA Gene BVT0102_033536 + 0 NULL GK000025.2:30090142-30845515 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39480 CTTCTCCGCAAAGTGCAACCCAGACACAAGGAAATGTCATTGCACAAAAGTTAACTGAAG Variant GeneID:539837|ALG10:NM_001076189:23_cdna 488^710 2 EMBV3_12969 GeneID:539837 5 GENE ALG10 ALG10B MGC139886 asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe) EMBV3_03759 TGTGCCCCATCCTAACTTTGTACTTGCTGAGATGCTTTAAACAGGCAGCTTGAGAGGAGG Gene BVT0102_043423 + 0 NULL GK000007.2:62978143-63064801 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213864 TCONS_00213859 1 XLOC_130558 Coding TCONS_00213864 XLOC_130558 NonCoding Coding - 7:62978294-62980475 - TSS160110 1846 5 TCONS_00213864_5 60 2 0.154128440366972 0.00291128668000192 0.00368515161321908 0.00128332821967614 0.00170491572185193 0.00423378380133171 4.50948432428339e-05 0.00169327886457652 0.00145144079276346 0.00268845449280104 8.93487612106169e-26 0 0 3.57487590767638e-05 0.000563154104531756 0.000180726942213994 0.00189140915761614 0 6.79600568042602e-05 0.00298723507311828 0.00356066400292887 0.000244318925668389 7.23575675340376e-05 0.000641089047605163 0.000154384041974497 0.00122730758474355 0.00248844012249417 0.000812536717166216 0.00017690925356339 3.50788225895416e-06 3.25690448789388e-06 NM_001001669.2 ARHGEF37 Homo sapiens Rho guanine nucleotide exchange factor (GEF) 37 (ARHGEF37), mRNA. 0.0 677 72.47 0.698808234019502 0 noncoding 1 1 1 1 0.18323512054949 0.403007001124109 -0.0431668322533732 0.563451153001563 CGGGCACGGAGAAGGTAGCCAAAAGAGGGAGATGAGCCTTGCGGAACGCCTGGTGTGGGTGGGCACGAAAGGCCCCAACCAGGGCAGCTCATTATGTTTGCCTGGAGAGGGCGTTCCAACCTGAGTCACAGCACCCTGGATGGCAGGTCCCAGCTGATGCACCAGGACTTGCTTGTGGCCAGTCTTACCCGTGCTCCTGCCCCAGCCTGTCCACGGGAGTGGGTCACCTAGATGAGCATTACCTGTGTGCTATGTGGTTGCATGGAGGGCCCCTGGAAAGCCCAGAACTGCCTGGTCTGACAGCTCACTTCCTTCCTGTGATATAGAGACACCATAGCTGACCAGTCAGCTTTTATTTCTCTACAGTGGGAGCTGAATTACCTTGGGCAGTGAACACACAGGACCCCTCTCTAGCAGGGAGCGAGGGCTTGTCAGGGCAGTAGAAAGGTTCCCAGGAGTCTTTTGGCTGGGCCTGGAGTGGGTGTGAGCAAGTCACGATTCTGGAATGTATGTAGGCAAATGCAGAGGCTGCCCCAGGGGAGAGGGGTTTTTGAGGGTGTGTTAGGTGGGGTGTGTGAAGTTGTACAGTTGAGGTGTGTGTTAGGTTGGCAGCAGTTGTACACTGCTGCTGTGTTCTCTGAACTAGGGGACAAAGGGCCATGCAAATCACAGAGGAAACTGTGAAGCAGGTAACTAAAGACCTGGTGGGTGGGTAATGACTTGGTTTCCTATTTCTGGAAGAAGGAGCCAGGGGAACCCCCGGTGGTTTCAGGAGGGTGGTGAGGGCCTGGAGGCCACAGTGGAGGTGATGTCAGTTGGCTGTGGAACCTCAGACATAGGACACAACCTCAGTTTTCACATCTATTAAGACCTAACTCAGGCTTGTGATGAGAATGAGGAGATGCCAAAGTTGTGGAAGCTCCTTGTGAATCGTGAAGTGTGACATAAAAGTAAAATTGCAGGATGTGCAGGAAGTGGTCTCAGGATGGCCCCAGGCATCAACTGGCCACTCTCCATGCCCATGGCCATGACCAACATTAATAATCAGTGTGGCATCCTTTGCTTTAAACCCAGGATCCCTCCCAGTGCTGCATTCTAAGTAACCAAACTTTTGAATTTGGTGAGATCACATTAATTGTCATCCCTTTCTAGAACCTAGAAATTGAAGCCTCTCAAAAGAGTTCCTGTTCAAGGAAAACTGACTACCAGGGCAAATTTGGGTGCAGCAGCTGTTGGATCATCATTTCTAAGTTGTTGCTTTGGGCTCAGATAAGTTGCAAGACTCACAGGAGAGAGAAAAGATTTCTGATGCAAACAAGAAGCACAGGAGAACAGGTAATAAAATAGGAAATCCAGCTGTGGTAGAACCAGTGTGGTTCTACAGTACTTTTGAGAGCCTACTGTTTGCACTGGGGCAGCTTTCAACTATGACTGAAGCGAGGTTCCCACTCAGAGATGCTGATGCAATTTGTCTGGAGTGTGGCCCAGCCTCAGGAAATCAGAGAGCTCCTCAAGTACTTCCAGTGTGTGGCCAGGGTTGGAGACCTCTGCCCTGGACACTCAGTGCTGGTCGAGATAGATCTAGGGTCAGAAATGGTCACAAGCTCTGACCTAGAATGTGCCCCATCCTAACTTTGTACTTGCTGAGATGCTTTAAACAGGCAGCTTGAGAGGAGGTTTGAAACAGGACAGCCTGTTCTTTCAGGTCCTAGAATGTATATTTATTAAGTGCCATTAAAAGGGACCTGAACAAAACTGGATGTTCTTGTAGGCATAAGGAAGAAAACCGAAATATACTTGGAACCAAATCTGTCTCACGAAAGGAAAATAAAAATGTATTCAGTAG TCONS_00213859 s 5' 0 TCONS_00213857 TCONS_00213858 TCONS_00213861 TCONS_00213863 s 3' 153 EMBV3_17551 AAACCATCCTTGTGGTTTTCCCAGCTGATTTCTTAAATTGCCCGAAGGATGATCCATTTG Gene GeneID:523432|WDFY2:NM_001075842:127_cdna Constitutive 0 NULL GeneID:523432 12 GENE WDFY2 MGC139044 WD repeat and FYVE domain containing 2 EMBV3_13833 TACGTGGACGTGATGCCCGTGGATAAAAAGAAGACCTACGTGGCCTCGCTCAGGAATGGA Gene GeneID:505329|CRISPLD2:NM_001100299:14_cdna UTR3_Alt 2 NULL GeneID:505329 18 GENE CRISPLD2 NULL cysteine-rich secretory protein LCCL domain containing 2 EMBV3_26683 AAACCACTCCCACCCCGAAGACCTCGCCAGGTGAATCTGGGAAATCCGGGGACCGCAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28863 GTTGAAGAAATGGCCCTCCGACAGGCACCTCGTTTTCAGCAAAGTCTGTTTTCCCTGATC Gene GeneID:617609|POMT1:NM_001080330:217_cdna Constitutive 1 NULL GeneID:617609 11 GENE POMT1 NULL protein-O-mannosyltransferase 1 EMBV3_18575 ACCGAATGCATAAAAATCGGGGAAAAAGTCAGGGAGTAAGGACTGTGTTGTTCCTGGGAC Gene BVT0102_182649 + 0 NULL GK000019.2:14122128-14125751 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25626 GGCCACTGTTGAAACACGAAGCCCTGTCAAGCCAGGAGTCAAAGAAGAGCAAGAAGAGAG Gene GeneID:534728|LRRC42:NM_001046386:88_cdna Constitutive 0 NULL GeneID:534728 3 GENE LRRC42 MGC137941 leucine rich repeat containing 42 EMBV3_16691 GGGCCCCGGAATTGGTCCTCCGGAGCCGTGGCCCGCTGCCCCCTGTCCACTGGGCGAGCC Variant GeneID:540350|MYCL1:XM_002686460:490_cdna 282^512 1 EMBV3_16676 GeneID:540350 3 GENE MYCL1 NULL v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) EMBV3_30784 GCATAAGAGCATGCTGGGAAGAGTATCCTTGCTTATAGGTTCTTCCCTTTCACCACATCA Gene BVV0101_041414 - 1 EMBV3_29385 GK000019.2:1924250-2362213 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42346 TGCAAATCCATTTCAGTTTTATTACTCGCCCCCCTTCCAGTTCGTGGCCTTCTCCTCCCC Gene BVT0102_144116 - 0 NULL GK000023.2:35731139-36292281 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135059 TCONS_00135061 TCONS_00135060 1 XLOC_081630 Coding TCONS_00135061 XLOC_081630 Coding Coding SOX4 23:36289633-36294779 = TSS100561 4697 1 TCONS_00135061_2 377 2 0.0874635568513119 0.00278508435939042 0.00162994382741142 0.00120116718672245 0.00300692226887597 0.00121184371140731 0.000512597676773934 0.00125266021604413 0.000615051907870535 0.000388675292183124 0.000143892189776285 9.40084457955558e-05 0.000104553385589841 0.000367646948563582 0.00148608046865197 0.00072003166454872 0.000594818797580461 0.000339890524091242 8.05752195742619e-05 0.00148793445088755 0.00195379824014149 0.00144024850144351 0.000259049566431993 0.000281252081210842 0.000590106566389061 0.00283405423252777 0.00155338983482742 0.00234362567928599 0.000100645165179499 0.000181367729836891 0.000282883748800609 NM_001078128.1 SOX4 Bos taurus SRY (sex determining region Y)-box 4 (SOX4), mRNA. 0.0 1613 99.78 0.191185863317011 NM_003107.2 SOX4 Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA. 0.0 2758 90.08 0.425377900787737 TCONS_00135061_2 sp|Q06831|SOX4_MOUSE SOX4_MOUSE Transcription factor SOX-4; 5e-102 313 96.20 0.416445623342175 2 coding 1 1 1 1 0.299523571592922 0.205070747920515 -0.0229814982962774 0.819441856872364 GGCCAAGACTGGGAAAGGATAAAGAGGCGCGAGGCGGAATTGGGGTCCGCTCTAAGCTGCAGCAAGGGAAACCGTGTGTGAGAGGAAGAGGCCTGTTTCGCTCTGGGTCTCTAGTTCTTGCACGCTCTTTAAGAGTCTGCACTGGAGGAACTCTGCCATTACCAGCTCCCTTCTTGCAGGAGGGAGGGGGAAACATACATTTATTCATGCCAGTCTGTTGCATGAAGCCTTTCTGGCGTCCTACCTTGCAACAAAATAATTGCACAAACTCCTTAGTGCCGATTCCGCCCACAGAGAGTCCTGGAGCCAGAGCCTTTTCTGCTTTGCATTGTAAGAGAGGGACTAACTGATAGAGACTATGTCGCTTTCCTGAGCTTCTGAGAGCGCTCGCGAACTGGAATCAACTGCTTCAGGGGAAGGAAAAAAAAAAAAAAAAAGACTTGCCTGGGAGGCGGCGAGAAACTTGTATTGGAAGCTTCAGCAACCAGCATTCGAGAAACTCCTCTCCACTTTAGCACCGTCTCCAGGACGCAGAGCCGAGAGACAGCGCAAACTGCGGCGCGGTGAGAGAGAAGAGCTAGAGAGAGGGAGATTCTCCAGCCTGGGAACTATAACTCCTCTGCTTGAGGCGGAGTGCTCCCGCCCCGCATCTTTTTGGAGACTTTTCTCTCTTCGCCCACCTCCGCCCCGGCCAGGAGTTGAGCCGCCCGCTCGACCGCCGCGCACGTCCCCTCGCTCGGCGTGCGCTTGGTCCCGGGAGCCAGGAGGGCCCGGCGATCGCGCCGCGGCCGCCGCGAGGGTGTGAGCGCGCGTGGGCGCCCGCCGAGCCGGGGCCATGGTGCAGCAAACCAACAACGCCGAGAACACGGAAGCGCTGCTCGCCGGCGAGAGCTCGGACTCGGGCGCCGGCCTCGAGCTGGGCATCGCCTCCTCCCCCACGCCGGGCTCCACCGCCTCCACGGGCGGCAAGGCCGACGACCCGAGCTGGTGCAAGACGCCGAGTGGGCACATCAAAAGGCCCATGAACGCCTTTATGGTGTGGTCGCAGATCGAGCGGCGCAAGATCATGGAGCAGTCACCCGACATGCACAACGCCGAGATCTCCAAGCGGCTGGGCAAACGCTGGAAGCTGCTCAAAGATAGCGACAAGATCCCTTTCATTCGGGAGGCGGAGCGGCTGCGCCTCAAGCACATGGCTGACTACCCCGACTACAAGTACCGGCCCAGGAAGAAGGTGAAGTCCGGCAACGCCAACTCGGGCTCCGCGGCCGCCGCCGCCTCCAAGCCTGGGGAGAAGGGCGACAAGGTCGGTGGCAGCGGCCACGGGGGCGGCGGCGGCGGGGGCAGCCACGCGGGGGGAGGAGGCGGCGGCGGCCCGGGCAAACACCCGGCGGAGAAGAAGGTGAAGCGCGTCTACCTGTTCGGCGGCCTGGGCGCGTCGTCCTCGCCCGTCGGCGGCGTGGGCGCGGGGGCCGACCCCAGCGACCCCCTGGGCCTGTACGAGGAAGGGGGCGCCGGTTGCTCGCCCGACGGGCCGAGCCTGAGCGGCCGCAGCAGCGCCGCCTCATCGCCGGCCGCCGGCCGCTCGCCCGCCGACCACCGTAGCTACGCCAGCCTGCGCGCCGCCTCGCCCGCCCCGTCCAGCGCGCCCTCGCACGCGTCCTCGTCGGCCTCGTCCTCCTCCTCCTCCTCGTCGTCGTCCTCCTCCTCCTCGTCATCGGGCTCGTCGTCCTCCGACGACGAGTTCGAAGACGACCTGCTCGACCTGAACCCCAGCTCAAACTTTGAGAGCATGTCCCTGGGCAGCTTCAGCTCGTCGTCGGCGCTGGACCGGGATCTGGATTTTAACTTCGAACCCGGCTCCGGCTCGCATTTCGAGTTCCCGGACTACTGCACGCCCGAGGTGAGCGAGATGATCTCGGGAGACTGGCTGGAGTCCAGCATCTCCAACCTGGTCTTCACCTACTGAAGGGCGCGCGGGCTGGGAGAGAGAGGGACGGGGCGGGTGGTGGGGTGGGGGGAGGACCTGAGAGGAAAATGAAAAAGAAAAAAAAAAAAAAAAAAGCGAACAGAGAAAAGAGTTGCAAGAGAAAAGGGAAAACAAGAGGGGGGAAAAAAAAAAAGGAAAAGGAGAAAAAAAAAAAAGTGAGCAGGGCCGGCTTCGGCCGCGTCCGGGTGCTCGGAGAGCAACGCCACGGCGTCTGGGGACCCGCGCTCCCAACCCCCATCTCGCCGGCCGGAGAGACGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCCGCCTGCCCCCCCCCTCTTTTTTTGCCTTTTTTTTTTTTCTTCCCCTGCCCCTGCAGCCAGAGGAGGAGACGTTGAGTGACCGGCGCTCGGAAATGACCCGAGAACCTAGTTGGAAAGCCACACCAGCCAGGACGAGGGGCGGGGAGGAGAAGGCCACGAACTGGAAGGGGGGCGAGTAATAAAACTGAAATGGATTTGCACGTTCGGGAGAAGGTGGCGGCGTCTCCTGGGCCTCCGCCTCCTGCATCTCTGAAACCAGTGAGGTGAGACTTCACGGCCCCGCAGGCGCGGAGGAGAGGAGACTGTTCGATGTGGTACCCGGGGCAGTGGAGGGCGAGTGGTGTCGGGGGGGAAAAAAAGGTTTTTTGCTTCTCTTAATCGGAATCGTGATGGTGTTGGATTATTTCACTGGTGGGGTTAATATAGCATGTTATCCTGTCTATCTTTTAAAGATTTCTGTATTAAGACTGTTGAGCAGTTTTTAAAATAGTGTAGGATAATATAAAAAGCAGATAGATGGCGCTATGTTTGATTCCTACGACAGAAATTATCACCAGCTTTTTTTCATTCTTAACTCTTTAAAGGATTCAAACGCAACTCAAATCTGTGCTGGACTTTAAAAAAAACCAATTCAGGACCAAATTTTTTCTCAGTGTGTATGTGTTTATTCCTTATAGGTGTAAATGAGAAGACGTGTTTTTTTCCCTCACCGATGCTCCATCCTCGTATTTTTTTTTCCTTGTAAATGTAATCAGATGCCATTTTATATGTGGACGTATTTATACTGGCCAAACATTTTTTTTCTTATTTTGTCCCTTTTTTTTTTTTTTTTGCTTTCTTTTGCTTTGCTTTCTATTTACTTCCTTATTTCTTCTTTCCTTACTTTCTTTTTTCTTTCGTTTCTTTTTTTTTTTTTTTTTTGGTAGTTGTTGTTACCCACGCCATTTTACGTCTCCTTCACTGAAGGGCTAGAGTTTTAACTTTTAATTTTTTATATTTAAATGTAGACTTTTGACACTTTTAAAAAACAAAAAAAGACAAGAGAGATGAAAACGTTTGATTATTTTCTCAGTGTATTTTTGTAAAAAATATATAAAGGGGGTGTTAATCGGTGTAAATCGCTGTTTGGATTTCCTGATTTTATAATAAGGCGGCTGGTTAATATCTCACACAGTTTTAAAAAATCAGCCCCTAATTTCTCCATGTTTACACTTCAATCTGCAGGCTTCTTAAAGTGACAGTATCCCTTAACCTGCCACCAGTGTCCATCCTTTGACCTCAGCCCTATAAAAAGGGGAGGAGAATTAGCCAAACACTGTATGCTTTTAAAGAAAAACGAGTTTTTTTTTAAACAAAATACTGTTTTATGCAGAGGCTTTAAAACTGGTGCATTTACAGCAAAAAGGGATCCTGTAGCTTTAACTTGTAAACCACATCTTTTTTGCACTTTTTTTATAAACAAAAACGTGCCGTTTAAACCACTGGATCTATCTAAATGCCGATTTGAGTTCGCGACACTATGTACTGCGTTTTTCATTCTTGTATTTGACTATTTAATCCTTTCTACTTGTCGCTAAATATAATTGTTTTAGTCTTATGGCATGATGATAGCATATGTGTTCAGGTTTATAGCTGTTGTGTTTAAAGATTGAAAAAAGTGGAAAACATCTTTGTACATTTAAGTCTGTATTATAATAAAGCAAAAAGATTGTGTGTATGTATGTTTAATATAACATGACAGGCACTAGGACGTCTGCCTTTTAAGGCAGTTCCGTTAAGGGTTTTTGTTTTTAAACTTTTTTTTGCCATCCATCCTGTGCAATATGCCGTGTAGAATATTTGTCTGAAAATTCAAGGCCACAAAAAAACAATGTTTGGGGGAAAAAAGAAAAAGAAAAAAAAATCATGCCAGCTAATCATGTCAAGTTCACTGCCTGTCAGATTGTTGATATATACCTTCTGTAAATAACTTTTTTTGAGAAGGAAATAAAATCAGCTGGAACTGAACCCTAAATCTTGACTTTTGTCATTATTATGCCCAAAGCATAAGATTGGAAGGGCCCTAGGGCTTGTAGAGACTACATCATCTGCCCTAGCTTTGAAACAAGTGAGTTCTCAGGCCTGTTACATGCCATCTAATTGAGGAATAAATCTAAATTCCTCTCACTCAGATTGGGCAGGCACTAACCCTGAAACCATGTGTCAACTCTACACGCTTTCTAGGAATTTTCTGAGTTTACCCCCATTTAAATCAACGCCCATTGTCTTGAAATTTTAAAAAGAAGGGGAGGGGTAATGTGGACAGAATTCTTCACAGATAAAACCAGGTCCTAAAACTGCTTTCTCCTTGATTTGCCTAGATTTACCATCCAGCAGCAGCTAGAATTGTTTCTCAC EMBV3_10619 CGTCAGGACGGTCAGGATGAGAAGAAGGAACCGAAAGACTAGGAGATACGGGGTTTTGGA Gene GeneID:614659|TMEM157:XM_002689406:35_cdna Constitutive 0 NULL GeneID:614659 7 GENE TMEM157 NULL similar to transmembrane protein 157 EMBV3_33076 GTACATGTACTGGACAATGCTGCAGCAGCTCACCCACCACTCTGTCAATGGCTGCAACCT Gene GeneID:508724|FAH:NM_001098912:18_cdna Constitutive 1 NULL GeneID:508724 21 GENE FAH FAA MGC159789 fumarylacetoacetate hydrolase (fumarylacetoacetase) EMBV3_05234 AGAGCGCAGTTCTGTAGTTATCTCGAGTAGGCTCAGCAGTTGTGGCTTGTAGCCTCTAGA Gene BVT0102_165561 - 1 EMBV3_03990 GK000011.2:56642387-56969006 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00031924 1 XLOC_018169 NonCoding TCONS_00031924 XLOC_018169 NonCoding NonCoding - 11:56738063-56738678 - TSS22923 615 1 TCONS_00031924_1 75 0.99349593495935 1 0 0.000707938637857071 0.00182995958333618 0.00164013922041093 0.00221443768665989 0.000144502807963861 0.000221021274777911 0 0 0 0 0 0 4.66549293247635e-06 0 0 0 0 2.44789402447361e-05 0.000151580567131523 3.50802594102602e-05 0.000404763725695881 0 0 0 0.0017799999385611 2.29121027810883e-05 0.000352501020448467 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 7e-45 185 74.47 0.523577235772358 NM_001167912.1 VEPH1 Homo sapiens ventricular zone expressed PH domain-containing 1 (VEPH1), transcript variant 2, mRNA. 8e-06 55.4 75.00 0.128455284552846 0 noncoding 0 0 0 0 -0.0295424536160747 0.838426846136644 -0.0153398537314604 0.790516114145427 TTATCTCTTAGTTTCCACAGGTCAGGAATTTGGGGCAAGAGTTAGCTGGGTCTTTTGCTCAGAGTTTCATCATGCTGAAATCAAGGTATTGTCCAGAGCTGTTGTCTCATCTGAGTTTTTTTTCTTTTTTTTTTTTTAAGATTTATTTAATTTATTTTTTGGCTGTATTGGGTCTTTGTTGCTGCATGAGGGCTTTCTCTAGTTGTGGCAAGCAGGGCCTACTTTTTGTTGCAGTGCCCTGGCTTTTCATTTTGGTGGCTTCTTGTTGCAGAGCGCAGTTCTGTAGTTATCTCGAGTAGGCTCAGCAGTTGTGGCTTGTAGCCTCTAGAGAGCTGGCTTAGAGTTGTGGCACTCAGGTTTAGTTGTTCCATGTCATGTGGGATCTTCCCCAACCAGGGATTAAACCAGTGTCCCTTGCATTGCAAGGTGAATTCTTAACCACTGTGGACCACCAGGTAAGCCCTCATCTGAGGTTTTAAAGCTCATAAGTTCGTTGGCAAAATTTTATTTCTTTAGGTTGTAGGACTGAGACCTTCAGTTCCTAGAGGTCACCCCTCTTCACAAGCAATTCACATTGTGGCAGTTTTGCTTCTTTCTCCAGGCCAGCAAGCATCA TCONS_00027942 . 5' 95678 TCONS_00027942 . 5' 95678 EMBV3_37965 TTCTGAATGATCCGGCCACAGAAGGCATCATATTGATTGGTGAAATTGGTGGTAATGCCG Gene GeneID:509983|SUCLG1:NM_001035082:68_cdna Constitutive 0 NULL GeneID:509983 11 GENE SUCLG1 NULL succinate-CoA ligase, alpha subunit EMBV3_39032 AAAACCCAGGAGAAGCCGCCCAAAGAGCTGATATCCAAAGAGAAGAAGAAAAAGTGAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18627 AGAACGGCAAGCCTTTTCAGCCATCACCTTCATCTTAAGTTCTTGAAACCCCTCCCAGAG Gene GeneID:783681|JAG1:XM_002692032:25_cdna UTR3_Alt 2 NULL GeneID:783681 13 GENE JAG1 NULL jagged 1 (Alagille syndrome) EMBV3_20737 AGGACTCTTCCAGTCGTGGGCACACGAAGGGCAAACAGCTGACCTATACCTATCCACTGG Variant GeneID:282218|DNASE2:NM_001075127:8_cdna 494^658 3 EMBV3_25117 GeneID:282218 7 GENE DNASE2 MGC140819 deoxyribonuclease II, lysosomal EMBV3_03387 CGCCTGTGTCGTGCGGTTATGCAATGGTCTCTGCAAGATGGTTTATTCTTGAATTGGAGC Gene BVT0102_012306 + 0 NULL GK000030.2:107862519-108187915 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247895 TCONS_00247887 TCONS_00247892 TCONS_00247894 TCONS_00247893 TCONS_00247888 TCONS_00247899 1 XLOC_151452 Coding TCONS_00247888 XLOC_151452 Coding Coding USP9X X:107774523-107896701 j TSS185519 9974 1 TCONS_00247888_14 2570 0.00882293964307199 47 0.918749028049469 0.00506085400845499 0.00535727526353147 0.002463531225385 0.00286611481723607 0.00216930475826324 0.000816008988364553 0.00131027800918538 0.0025411096233794 0.00319839897332292 0.00186366333221161 0.000446906562664361 0.000991280870926787 0.000486874129625934 0.00102295716100187 0.00075258062706497 0.0123920948829385 1.11678270215746e-82 0.008383885564088 0.00443486703957151 0.00480174109525635 0.000992139813291835 0.00252096905200111 0.0041039857781681 0.00603426577645123 0.00438338506710738 0.00725462733083706 0.00255868279963854 0.000996438372593866 0.00071512866674441 0.00190684070841716 XM_001787392.4 USP9X PREDICTED: Bos taurus ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 1, mRNA. 0.0 1.746e+04 100.00 0.970423100060156 XM_005272675.1 USP9X PREDICTED: Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant X1, mRNA. 0.0 1.428e+04 92.58 0.96921997192701 TCONS_00247888_14 sp|Q93008|USP9X_HUMAN USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X; 0.0 5315 98.83 0.999610894941634 0 coding 0 0 1 1 1.30555076876891 0.127635590673963 -0.0705319746794489 0.515564169153704 GCTGCCTCCACCGCCGCCACTGCTGCTGCCACCGCTACCGCCGCCGCCACTGGCCGAGCGGTTTTTTTTTTTTTTTTTTTTTGGTTTGCCGGATCCGCCATATTGAAGAGGACGGGCATCCGCGGCTGCGGAAGCTAGTCTCCGCCGCCGCCGGAGCCGCAACCTCCCTGCACCCGGCCCATTCGGGCCTCTGCCGCGCGGAGCCCCTCCCCGTATCGCTCAGCTCACAGGCCTAGCGGGAGGCGGCCGCTTCTGCGCCCGGTGCTTCGCTGGGCGCCGGGTGCTAGGAGCAAGCCGCAGCAGAGCGAGCAGGCCCGGAGCGGGGACAGAGGCGGCGACCAGTGGAAGGTGAAGCCGCCACTGCGGGAGGAGGAGCAGGAGGAGGTGACGCAGGAGAAACGCACAGCCCGGAGCCCGTCTGCGCTCAGAAAGAGCCTCAGCCCGAGGCGAGAAGGGGGAAGAGGGCCGCCGCCGGCTGAGGAGTGGGGGGGGAGGAGGCGGCCGCGGCCACCTCTGCTGCAAGGCGGGCGCGGCGAGCAGCGAATTTCGGTGCCTCTGTGCAGCTCCCCGGTCCCTACGCCTACGATCTCTCGACACACTTTGTCGCCCGTCACCCTTGGGCCTGGGATGCACCCAGGGTCGGCCTTGTCCCGGGACTGAGCCTTGGTTGTCGCCTCCGCGTGTCTTGCTTCTTAAGAGAAGACGCCTGTGTCGTGCGGTTATGCAATGGTCTCTGCAAGATGGTTTATTCTTGAATTGGAGCTTTTTAAGACTGACAAATGCTGGTACTTCACCTTCTATAAGTGGACTATAATTTCTTTTTTCAAGACAACTACATAAGCAGACAAAATTGCAAAGATCTGCCCTGTGTCGAGTATGACAGCCACGACTCGTGGCTCTCCAGTAGGAGGGAATGACAGCCAGGGCCAGGCTCCTGATGGACAGTCTCAGCCCGCCCTCCAACAGAATCAGACCTCATCGCCTGATTCCTCCAATGAAAATTCCCCGGCAACTCCTCCAGATGAGCAAGGTCAAGGTGATGCCCCATCACAGCTTGAAGATGAGGAGCCTGCATTTCCACATACTGACCTGGCAAAGTTGGATGACATGATCAATAGGCCTCGATGGGTGGTTCCAGTTTTGCCAAAAGGGGAATTAGAAGTGCTTTTAGAAGCTGCTATTGACCTTAGTAAAAAAGGCCTTGATGTTAAAAGTGAAGCATGTCAGCGATTTTTTCGAGATGGGCTAACAATATCTTTCACGAAAATCCTTACAGACGAGGCAGTGAGTGGCTGGAAGTTTGAGATTCATAGGTGTATTATCAACAATACTCATCGCCTGGTGGAACTATGTGTGGCCAAGTTGTCCCAAGATTGGTTTCCACTTCTAGAACTTCTCTCCATGGCCTTAAATCCTCATTGCAAATTCCATATCTACAATGGTACACGTCCATGTGAATCCGTTTCCTCAAATGTTCAGTTGCCTGAAGATGAACTCTTTGCTCGTTCTCCAGACCCTCGATCGCCAAAAGGTTGGCTAGTGGATCTTCTCAACAAATTCGGCACTTTAAATGGATTCCAGATTTTGCATGATCGTTTTATTAATGGATCAGCATTAAATGTTCAAATAATTGCAGCCCTTATTAAACCATTTGGACAATGCTATGAGTTTCTCACTCTTCATACGGTGAAAAAGTACTTTCTTCCAGTAATAGAAATGGTTCCACAGTTTTTAGAAAACTTAACTGATGAAGAACTGAAAAAAGAAGCAAAGAATGAAGCCAAAAATGATGCTCTTTCAATGATTATTAAATCTTTGAAAAATTTAGCTTCAAGAGTTCCAGGACAAGAAGAAACTGTAAAAAACTTAGAAATATTTAGGTTAAAAATGATACTTAGATTATTGCAAATTTCTTCTTTCAATGGAAAAATGAATGCACTTAATGAGGTTAATAAGGTGATATCTAGTGTATCATACTACACCCATCGGCATGGTAACCCTGAGGAGGAAGAATGGCTCACAGCTGAACGAATGGCAGAATGGATACAGCAGAACAATATTTTGTCCATAGTCTTGCGAGATAGTCTTCATCAACCACAGTATGTGGAAAAGCTAGAGAAGATTCTTCGTTTTGTCATCAAAGAAAAAGCCCTGACCTTACAAGATCTTGATAATATCTGGGCAGCACAGGCAGGGAAGCATGAAGCCATTGTGAAGAATGTACATGATCTACTGGCGAAATTGGCATGGGATTTTTCTCCTGAGCAACTTGATCATCTTTTTGATTGCTTTAAGGCCAGTTGGACAAATGCAAGTAAAAAGCAGCGAGAAAAGTTACTTGAGCTGATACGTCGTCTTGCAGAAGATGACAAAGATGGTGTGATGGCACACAAAGTGTTGAACCTCCTCTGGAATCTGGCCCATAGTGATGATGTGCCTGTAGACATCATGGACCTGGCTCTCAGCGCCCACATAAAAATACTAGATTATAGTTGTTCCCAGGACCGTGACACACAGAAGATACAGTGGATAGATCGCTTTATAGAAGAGCTTCGTACAAATGACAAATGGGTGATTCCTGCACTGAAACAAATTAGAGAAATTTGTAGTTTGTTTGGTGAAGCACCTCAGAATTTGAGTCAAACTCAGCGAAGTCCCCATGTATTCTATCGCCATGACTTAATCAATCAACTTCAGCACAATCATGCCCTAGTTACTTTGGTAGCAGAAAACCTTGCAACTTACATGGAAAGCATGAGGCTGTATGCTAGAGACCATGAAGACTATGACCCACAAACTGTGAGGCTGGGAAGTAGATACAGTCATGTTCAAGAAGTTCAAGAACGGCTTAACTTCCTTAGATTTTTATTAAAGGATGGCCAACTGTGGCTATGCGCTCCTCAGGCAAAACAAATATGGAAATGCTTAGCAGAGAATGCAGTTTACCTTTGTGATCGTGAAGCCTGTTTTAAGTGGTATTCCAAGTTGATGGGGGATGAACCAGACTTGGATCCTGATATTAATAAGGACTTCTTTGAAAGCAATGTACTTCAGCTTGATCCATCCTTGTTGACTGAAAATGGGATGAAATGTTTTGAACGATTCTTCAAAGCTGTGAATTGTCGGGAAGGAAAACTGGTAGCCAAAAGGAGAGCATATATGATGGATGATTTGGAACTAATTGGATTAGACTACCTTTGGAGGGTGGTGATTCAGAGTAATGATGATATTGCCAGCAGAGCTATAGATCTCCTTAAAGAGATATACACAAACCTTGGTCCAAGGCTACAGGTCAATCAGGTGGTGATCCATGAAGACTTCATTCAGTCTTGCTTTGATCGTTTGAAAGCCTCCTATGACACTTTATGTGTTTTGGATGGTGACAAAGACAGTATTAATTGTGCGAGACAGGAAGCTGTTCGAATGGTTCGAGTATTAACTGTATTAAGGGAATATATAAATGAATGTGATAGTGATTATCATGAGGAAAGAACAATTCTGCCTATGTCAAGAGCTTTCCGTGGTAAACATCTCTCTTTTATAGTTCGATTTCCAAACCAAGGCAGACAGGTTGATGACTTGGATGTATGGTCTCATACAAATGATACAATCGGTTCAGTACGACGATGTATTCTCAATCGTATCAAAGCCAATGTAGCTCATACAAAAATTGAGCTCTTTGTGGGTGGTGAACTGATAGATCCTGCAGATGATAGAAAATTGATCGGACAATTAAACTTAAAAGATAAGTCGCTAATTACAGCCAAACTTACACAGATCAGTTCCAATATGCCTTCAAGCCCTGATAGCTCTTCTGATTCCTCAACTGGGTCTCCTGGAAACCATGGTAATCATTACAGTGATGGTCCCAATCCAGAAGTGGAAAGCTGTTTGCCTGGGGTGATAATGTCACTGAATCCCAGATACATCTCTTTCCTTTGGCAAGTCGCAGACTTGGGTAGCAGCTTAAATATGCCACCTCTTAGAGATGGAGCAAGAGTACTTATGAAACTTATGCCACCAGATAGCACAACAATAGAAAAATTAAGAGCTATTTGTTTAGACCATGCCAAACTTGGAGACAGCAGCCTTAGTCCATCTCTTGACTCACTTTTCTTTGGTCCTTCAGCCTCACAAGTACTATACCTAACAGAGGTAGTCTATGCCTTGTTAATGCCTGCTGGTGCACTTCTGGCTGATGATTCCTCTGATTTTCAATTTCACTTCTTGAAAAGTGGTGGCCTCCCCCTTGTCTTGAGCATGCTAACCAGAAATAACTTCTTACCAAATGCAGATATGGAAACTCGAAGGGGTGCCTACCTCAATGCTCTTAAAATAGCCAAGCTGTTGCTAACTGCCATTGGCTATGGTCACGTTCGAGCCGTGGCAGAAGCTTGTCAGCCGGGTGTGGAAGGCGTGAATCCGATGGCATCGGTCAACCAAGTGACTCATGATCAAGCAGTGGTGCTACAAAGTGCCCTTCAGAGCATTCCCAATCCATCGTCTGAATGCATGCTTAGAAATGTGTCAATTCGTCTTGCTCAGCAAATATCTGATGAGGCTTCAAGATATATGCCTGATATTTGTGTAATTAGAGCTATCCAAAAAATCATCTGGGCATCAGGATGTGGGGCATTACAGCTAGTATTTAGCCCAAATGAAGAAATCACTAAAATTTATGAGAAGACCAATGCAGGCAATGAGCCAGATTTGGAGGATGAACAGGTTTGCTGTGAAGCAATGGAAGTGATGACATTATGTTTTGCCTTGATTCCAACAGCCTTAGATACTCTTAGTAAAGAAAAGGCTTGGCAGACATTCATTATTGATTTACTATTGCACTGTCACAGCAAAACTGTTCGCCAGGTGGCACAGGAGCAGTTCTTTTTAATGTGCACCAGATGTTGCATGGGACACAGGCCTCTACTTTTCTTCATTACTCTGCTCTTCACCGTTTTGGGGAGCACAGCCAGAGAGAGAGCTAAACATTCAGGCGACTACTTTACTCTTTTAAGGCACCTTCTTAATTATGCCTACAATAGTAATATTAACATACCCAATGCAGAAGTTCTTCTCAATAACGAAATTGATTGGCTTAAGAGAATCAGGGATGATGTTAAGAGAACAGGTGAAACGGGTATTGAAGAGACGATCTTGGAAGGTCATCTTGGGGTAACAAAAGAATTACTGGCTTTTCAAACCCCTGAGAAAAAGTATCATATTGGTTGTGAAAAAGGAGGTGCTAATCTCATTAAAGAATTAATTGATGATTTCATCTTCCCTGCGTCCAATGTTTACCTGCAGTATATGAGAAATGGAGAACTGCCAGCCGAACAGGCTATTCCAGTCTGTGGTTCACCAGCTACCATTAATGCGGGCTTTGAGTTACTTGTAGCATTAGCTGTTGGCTGTGTGAGGAACCTCAAACAGATAGTAGATTCTTTGACTGAAATGTACTACATTGGCACAGCAATAACTACTTGTGAAGCACTTACCGAGTGGGAATATCTACCACCTGTTGGACCCCGCCCACCAAAAGGATTTGTCGGGCTGAAAAACGCTGGTGCTACTTGTTACATGAACTCTGTGATTCAGCAGCTCTACATGATTCCGTCCATTAGGAATGGTATTCTTGCAATTGAAGGCACAGGTAGTGATGTAGACGATGATTTGTCTGGGGATGAGAAGCAGGACAATGAGAGCAATGTTGATCCCAGAGATGATGTATTTGGATACCCTCAACAATTTGAAGACAAACCAGCATTAAGTAAAACAGAAGACAGAAAAGAGTACAATATTGGTGTTTTGAGACACCTTCAGGTCATCTTTGGTCATTTAGCTGCTTCTCGACTACAGTACTATGTGCCCAGAGGATTTTGGAAACAGTTCAGGCTTTGGGGTGAGCCTGTTAATCTTCGTGAACAACATGATGCTTTAGAATTTTTTAATTCATTGGTGGATAGTTTAGATGAAGCTTTGAAAGCCTTAGGACATCCAGCTATGCTAAGTAAAGTCTTAGGAGGTTCCTTTGCGGATCAGAAGATTTGCCAAGGCTGCCCACATAGATACGAGTGTGAAGAATCTTTTACGACTTTGAATGTAGACATTAGAAATCACCAAAATCTTCTTGATTCTTTGGAACAATATGTCAAAGGAGATTTATTAGAAGGTGCAAATGCTTATCATTGTGAAAAATGCAATAAAAAGGTTGATACTGTAAAGCGCTTGCTTATTAAAAAATTGCCTCCTGTTCTTGCTATCCAACTAAAACGATTCGACTATGATTGGGAAAGAGAATGTGCAATCAAGTTTAATGATTATTTTGAATTTCCTCGTGAGCTGGACATGGAACCGTACACAGTTGCAGGTGTTGCAAAGCTGGAAGGAGATAATGTAAACCCAGAGAGTCAGTTGATACAACAGAATGAGCAGTCTGACAGTGAGACAGCAGGAAGCACGAAATACAGACTTGTCGGGGTGCTTGTACACAGCGGTCAAGCAAGCGGAGGACATTACTATTCTTACATCATTCAAAGGAATGGAGGAGATGGTGAGAGAAACCGTTGGTACAAATTTGATGATGGAGATGTAACTGAATGTAAAATGGATGACGATGAAGAAATGAAAAACCAGTGTTTCGGTGGAGAGTACATGGGAGAAGTATTCGATCACATGATGAAGCGCATGTCATACAGGCGCCAGAAAAGGTGGTGGAATGCTTATATACTTTTTTATGAACGATTGGACACAATAGACCAGGGTGATGAATTGATACGATACATATCAGAGCTTGCTATCACCGCAAGACCCCATCAGATTATTATGCCATCAGCCATTGAGAGAAGTGTACGGAAACAGAACGTGCAATTCATGCATAACCGAATGCAATACAGTATGGAATATTTTCAGTTTATGAAAAAACTGCTTACATGTAATGGTGTTTACTTAAATCCTCCTCCAGGGCAAGATCACCTGTTGCCTGAAGCAGAAGAAATCACAATGATTAGTATTCAGCTTGCCGCTAGGTTCCTCTTTACCACAGGATTTCACACCAAGAAAATAGTCCGTGGCTCCGCCAGTGATTGGTATGATGCATTATGTATTCTCCTTCGTCACAGCAAGAATGTACGATTTTGGTTTGCTCATAATGTCCTTTTTAATGTTTCAAATCGCTTCTCTGAATACCTTCTGGAGTGCCCTAGTGCAGAAGTGAGAGGTGCATTTGCAAAACTGATAGTTTTTATTGCACATTTTTCCTTGCAAGATGGGCCATGTCCATCGCCTTTTGCATCTCCAGGACCTTCTAGTCAGGCTTATGACAACTTAAGCCTGAGTGATCACTTACTAAGAGCAGTATTAAATCTGCTGAGAAGAGAAGTTTCAGAGCATGGGCGTCATTTACAGCAGTATTTCAACCTGTTCGTAATGTATGCCAATTTAGGTGTGGCAGAGAAGACACAGCTTCTGAAATTGAGTGTACCTGCTACCTTTATGCTTGTGTCTTTAGACGAAGGTCCGGGTCCTCCAATCAAGTATCAGTATGCTGAATTAGGCAAATTATACTCGGTAGTGTCACAGCTAATCCGCTGTTGCAATGTCTCATCAAGAATGCAGTCTTCAATCAATGGTAACCCTCCTCTTCCCAATCCTTTTGGTGATCCTAATTTATCACAACCTATAATGCCAATTCAGCAGAACGTGGCAGACATTTTATTTGTGAGGACAAGTTATGTGAAGAAAATCATTGAGGACTGCAGCAACTCAGAGGAAACCGTCAAATTGCTTCGTTTTTGCTGCTGGGAGAATCCTCAGTTCTCATCTACTGTCCTCAGTGAACTTCTCTGGCAGGTGGCATATTCCTACACTTATGAACTCCGGCCCTACTTGGATCTGCTTCTGCAGATCTTGCTGATTGAGGACTCCTGGCAGACTCACAGAATTCACAACGCACTTAAAGGAATCCCAGATGACCGAGATGGGCTGTTTGACACAATCCAGCGCTCTAAGAATCACTATCAAAAAAGAGCATACCAGTGTATAAAATGTATGGTAGCGCTCTTTAGCAATTGTCCTGTTGCTTACCAGATTCTACAGGGAAATGGAGATCTTAAAAGGAAGTGGACCTGGGCAGTGGAATGGCTTGGGGATGAACTTGAAAGACGACCATACACTGGCAATCCTCAATACACTTACAACAATTGGTCTCCTCCAGTGCAAAGCAATGAAACATCAAATGGTTATTTCTTGGAGAGATCACATAGTGCTAGGATGACACTTGCAAAAGCTTGTGAACTCTGTCCAGAGGAGGTAAAAAAAGCCACCAGTGTGCAGCAGATAGAAATGGAAGAAAGCAAAGAACCAGATGACCAAGATGCCCCAGATGAGCATGAGTCACCTCCACCTGAAGATGCCCCGTTATACCCCCACTCACCTGGATCTCAGTATCAGCAGAATAACCATGTGCATGGACAGCCGTATACAGGCCCAGCAGCACATCACATGAACAACCCTCAGAGAACTGGCCAGCGAGCACAAGAAAATTACGAAGGCAGTGAAGAAGTGTCCCCGCCCCAGACGAAGGATCAGTGAAATGCACACGACTAGCTGGTTCCATCAAGACTGCACCCAGGCCTTACAGTCCAACCTTTTTCTGTGTCTGGCTAATATTTAAAACTAGAAAAAACTATTCCTAATCAATATGGAGTGGAAAGTTTATTCACTGTCTTATCTGCAGAAATTTGCTGTCAATATATAACTCGCCTGCAGTGGAAAGTGTATAGTGTTTTGTAATAAATGGCCTGATGCTAATGTGTAAATGGCAAAGGTGTATATAGTATATTAATGTCTGACTGTTAATTCTTAAGCAAGACTTTTTTCTTGATGAGACTCACAGATCTACAAAACCTACAAAAATTAATTTTCTTGTTATACCCATTGCACTCTCAACCAGTGTTGCCTGCCTGACGGCAGTTGGATCAACTCCTTTACAAAAACAAAAAATAAACCAACAGCAACAAACCAGAGCCCGTCCATGTCAGCCACACCAATAGTTTCATGTTCATTCTTGGCCACTGGAGTCAGTTTTATTATGAGCAATGTAAGGCTGGTAACCTTTAAATTATTTGGTTGATGTGGAAAATTGGTGATGTAACATTGTTTCTAGGTCTTTTTCATTGCCTTTTTATTCTGATGTTAGGTTAATCACTTTGAAGCTATAGTTATGCTGTAACATTTAGCATGGCTTCACACCAGGTTAGTGTAGCCAATGAGGAAAAAATTACCATAATGACAGCAGTTGTCCCAGTGTGACAGCTGTATTGCTCAGAGCTTTTCCTTACACCTAGAATATAAAATATAAAAACGGGGAGAAGTGTGATAAACAGGTGGATTTCAGTTACACATATGTTGCTTACATCTTAATGTTTGACAATTCAATCTCTGGGTGGGATAAAGAAACTTTAAGTGTCAGTAATGGGAATTTTAAAAGATTAAAACAAATATGCAAAAATTTGCTATGCCAGGATGCTCGGAGCATAATAGAAGACTGTATTTGGTGTGCTTGTTTTGTTTCTTTTGTAGAGCTTACTAGGAGAACCTTCTAAAACTTGCCTTCTGCTGGATCCCAGTGAAGCGGAGGTCATCAGAAACCCACAGTACTTGGAATACCATTGCACCAAGATGTTGGCTGAGCTGCCGCTCAGTCACAGTTCACTTGAAAGCAAGAGTTGTCCTAGCTCCTTCTCCATTATTCCAAAAATTTTCATGTTTGAAGCAGGGTCTTGGCTGCTTTGAGGGCTTGTGAATCCTTTCCCCCTCCACTTGAGGAAGAGTGGTCTGTGCTGTGATCAGGATCTTTAAAACAATCATTTTGAGTGAACATGGCAGAATTCCCTAGTAGTCCAGTGGTCAGAATTCCATGCTTCCATGACTGAAGGCCTGGGTTCGATCCCTAGTCAGGGAACTAAGGTCTCACT EMBV3_23430 TTTGGTGCTCTTCTTCTATCCTTTGGATTTAATGGTGGTTTGGGCCATATGAACATCGCA Variant GeneID:281998|PRDX3:NM_174432:5_cdna 360^495 2 EMBV3_04854 GeneID:281998 26 GENE PRDX3 NULL peroxiredoxin 3 EMBV3_34485 ATTGGCCACGTTTTGGTACTATGCCAAGGTTGAGCTGGTTCCTCCAACCCCTGCTGAGAT Gene GeneID:515696|ATP5L:NM_001024550:86_cdna Constitutive 0 NULL GeneID:515696 15 GENE ATP5L MGC127420 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G EMBV3_33186 GCCCCTTTTAATTTGTTTTCCTTTTGACTCTTGTTCCCGTTGGGAGCAGGAACGGCAGTA Gene GeneID:527885|ZDHHC9:NM_001034561:8_cdna Constitutive 2 NULL GeneID:527885 X GENE ZDHHC9 MGC127273 zinc finger, DHHC-type containing 9 EMBV3_12098 TTCTATACGGCGTGCAGGAGAAGCTGGGCGTGATGAACAAAGGCGTGGTGTATGCCCTGT Gene GeneID:511414|PPP1R13B:XM_002696847:685_cdna UTR3_Alt 2 NULL GeneID:511414 21 GENE PPP1R13B NULL protein phosphatase 1, regulatory (inhibitor) subunit 13B EMBV3_15192 TTTGCTCAAGAAGACAACAGAACTGCTGGTGAGCCTATGGAAGAGGAGCCAGCCTTGTGA Gene GeneID:535415|LOC535415:XM_002686702:172_cdna Constitutive 0 NULL GeneID:535415 4 GENE LOC535415 NULL similar to histone deacetylase 9 EMBV3_28556 CCGTCAGCCTGCTGGCCTTGAATGGACTTTTCATCTTGATTCATAAACACAACCTGTGAG Gene GeneID:514530|NOC4L:XM_002694435:158_cdna Constitutive 0 NULL GeneID:514530 17 GENE NOC4L NULL nucleolar complex associated 4 homolog (S. cerevisiae) EMBV3_37347 GTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCC Gene GeneID:535030|TNKS:XM_002698686:30_cdna Constitutive 0 NULL GeneID:535030 27 GENE TNKS NULL tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase EMBV3_23985 TTGAGGAGGCCTGAAGCTATTTTGTGGTACATCTGTCTGCCTGTGAGCGTCTGGATGATG Gene BVV0101_021534 + 0 NULL GK000030.2:91752688-91768032 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245020 TCONS_00245019 1 XLOC_150606 Coding TCONS_00245020 XLOC_150606 Coding Coding TBC1D25 X:91741513-91758939 j TSS184015 6328 2 TCONS_00245020_5 366 0.25094816687737 7 0.637245337159254 0.000450540270984018 0.000262045856569544 0.000443891137589034 0.000680827900423878 0.000208799643735816 0.000107993820056844 0.000231707134270011 1.34114482894171e-08 0.000651255253439948 3.27040784857683e-10 1.13618986248482e-06 1.25193748281829e-05 4.05834917535232e-05 8.71103168861271e-05 3.40272998717783e-05 3.1066445921862e-05 5.94139810938474e-06 1.11805177795714e-05 0.000203127553564611 0.000614664022128173 6.46478194421473e-08 4.05144706346291e-11 5.04191201999753e-12 0.000210439941263216 0.000651953861428559 0.00041937251667724 0.000324678913360412 1.29062705595634e-06 8.498736902236e-06 9.1351781206833e-06 NM_001205813.1 TBC1D25 Bos taurus TBC1 domain family, member 25 (TBC1D25), mRNA. 0.0 2385 100.00 0.208754740834387 NM_002536.2 TBC1D25 Homo sapiens TBC1 domain family, member 25 (TBC1D25), mRNA. 0.0 1894 83.75 0.282869785082174 TCONS_00245020_5 sp|A1A5B6|TBC25_MOUSE TBC25_MOUSE TBC1 domain family member 25; 0.0 608 90.61 0.986338797814208 1 coding 1 1 1 1 -0.0795920195653912 0.455087842093552 0.0464656046469853 0.465598394364377 ATAACATGCAGGCAGAAACTGCAAACATCTAAATGTACAGGTCCGTGAATTTTCATAACGTGTAAGCTATTTTTTAAAAGATTGTGGAAAAAGGATTATTCTTCCATTCAGCAGATTCATTTGAAATGATTTTAAATAGATGACGTCATCTCTAAGCAGAGATGCGAGGCGACTTGAAGCAGGACGTGGGGCCTTGACGTTATCGCGCAGCAGCGTCCTTTCCCCGCCCACTTTTCTCGCCCCAATAGGTCGCCGCGTTAACACTCACCTAGACGAATCCGGAAGCAAAGTGAGCAAATCAAGGACGAGGGAGGCGGGGCCTCAGTAGGCGCCTGCATACTGGCTAAATTGAGGCAAACTGCCCGGCTTTTGGGGGCGGGGCTCTTGGCAACTGCACACTCTGCGCAAGCGCAGAGGTGACCTCCTCCCTGTGCCAAACGGGGGGTGGGTAGGGTCGCGTGGCGCCCTCTGCGCCTGCGCCAGGGCACAAGGTGGGGCCGCGGGCGCCCGCATTCTGGCGTGCGCACAAGGGTAGGGGGCAACGGTTAGCTGTCACCCTGAGGTGGGTGGCAGCAGGATGGCGACGGCCTCTGGGTCCTCGGACTTGGCTGGCTCCGGAGCGCCCTCGCCTGGTGGGGGAGCCCAGGCGGCGGCAGCTGAGGAGGAGGAGCGAGAGGTGGTGCGGGTCCGAGTCAAGAAATGTGAGAGCTTCTTGCCACTTGAGTTTCGCTCTTTTGCTGTGGACCCCCAAATCACTTCGCTCGATGTGTTGCAACACATCCTCATCCGAGCCTTTGACTTGAATGGGAAGAAGAACTTTGGTATCAGCTACCTGGGCCGAGATCGGATGGGGCAGGAAGCTTACCTCTCACTCTTGTCTGACTGGGACCTCAGCACAGCCTTTGCCACTGCCTCCAAACCTTACCTGCACCTGCGTGTAGATATCCGGCCCACTGAGGACAGCCCGCTGCTGGAAGACTGGGACATAATCAGCCCCAAGGATGTCATTGGCTCCGATGTGCTACTGGCTGAGAAGCGGTCATCACTGACAACAGCTGCCCTGCCCTTCACACAGTCCATCATCTCTCAGGTGGGCCGCACCTTGTCTAAGGTCCAGCAGGTGCTGAGCTGGTCATATGGGGAAGATGTCAAGCCCTTCAAGCCGCCCCTGAGCGATGCGGAGTTTCATACCTACCTGAACCACGAGGGCCAGCTCTCCCGCCCCGAGGAATTGCGTCTGCGGATCTATCATGGTGGTGTCGAGCCCTCCCTGCGAAAAGTGGTGTGGCGGTACCTGCTGAACGTGTACCCAGACGGGCTGACAGGCCGAGAGCGGATGGACTACATGAAACGCAAGAGCCGGGAGTATGAGCAGCTCAAGAGTGTCCTACTGCCAGGGCATGAGTGACCTGGCCTCGCCCATCCTTGCTGTCATGGACCACGAGGGCCACGCCTTCGTCTGTTTTTGTGGCATCATGAAGCGCCTGGCTGCGAATTTCCACCCTGATGGTCGTGCCATGGCCACCAAGTTCGCTCACCTCAAGCTGCTGCTGCGACACGCGGACCCTGACTTCTACCAGTACCTGCAGGAAGCCGGTGCTGACGACCTCTTTTTCTGTTACCGCTGGCTGCTGCTTGAGCTCAAGCGCGAGTTTGCCTTTGACGACGCTCTGCGCATGCTGGAGGTCACCTGGAGCTCACTACCCCCTGACCCTCCTGAGCACGAGGTAGAGCTCGTGGGCCCCCCCAGCCTAGTGGTGGACATGGGCTTCGGGAGCCACCGGGGACGGCCCATGCGGCAGAGACACATGCTTAGGCCTGCCGGTGGAGGAGGTGGTGCCTTTGAAGATGCTGTTGACCACTTGACCACCAGCAGCCAGGGCCCTGGTGGCGGGGGGCGTCTTCTAAGGCAAGCCAGTCTGGATGACCTCCAGCAACTCAGGGATAGAACGGGCCCCAGGAGGGACTCCCTGATCCAGCTGCCCTACCCAGCCGCCCTCATCGGTTCCAAGTCTCTCTCTGAGCCCTTGCTGAACTCCTCAGACCCACTGCTTTCTCCCTCTTCCCACCCTGATTCACCATCCTCCTCATCTCCACCATCCACCCAGGATGCCTCTCCTGCTGGTGACGTGGCTGCTGGATCCCCCTTGATGCCAGAGGTGGGCTCCCCACAAGACTCTGGGAAGTCCTTGCCACCCCCACCCCCACTGGGCCTGCCCCCACCCCAGGAGTTTGGCCGAGGGAACCCATTCATGCTCTTCCTGTGCCTCGCCATCCTGCTGGAGCACCGTGACCACATCATGCGCAATGGGCTGGATTACAACGAGCTGGCCATGCACTTTGACCGCCTCGTGCGAAAACACCACCTGGGGCGCGTCCTACGCCGGGCCAAGGCTCTCTTCGCTGATTACCTGCAGTCAGAGATGTGGGACTCAGAGGAGGGAGCTGAGGCCACAGCCCCATCTTGATCAGACTCCCTTCAGCCCTCCATCAGCCCCATCAGATCTCCATTCTTTGCCAAGAGGGCCTACACGTGAGACCCCACATCCCTGCCTGCCAGCCCTAGACCTGTGGGAGCATAGTGCCCTGTCTCCCCAGGTCCGAGAGTATGGGGCTTTGCTTTGACAGTGCCCCATGGAGGCCCTGGCCTCCTTTCTCTGTTTTCTTGTTTTGTTTTTAACAACTGTACTTTGCACACGTGAAAGTCACTGTGGTCTGTGTATTTCTCTGCCTTCTCCCTGGTTTTTGTTATAAATGGAATCCCCAGGGCCTCTTTACCTGCTGGAGCTGAAACACTGCCCATTTCAAGTGAAGGGTGGCTCCCACTTCCCTGGTGACAGGAGAATGGATACTGATAAATCAATTCTAGAAGGTGAGCCCAGGTCAAACACCACTTGAGGAGGCCTGAAGCTATTTTGTGGTACATCTGTCTGCCTGTGAGCGTCTGGATGATGTCTGTAAATACATGTTTTTAGGACAGTCCCCTGAATGAGGGATGGGTGGGAGAGTTCCTGACTCAGAAAGGGCAAGATTCCTTACAAAGACTGGGAAGTATGGGCTACTTAGAATCATTGGATGAGCTACCTCTAGCATTGCACATGTCACCATTTCTAAGATCCAGACCCTTCCCTGTAAGTCTTATGCATGAATGCTAGTGGTCCTGGCAGGGGTCTAAGGTTCCTATTCTTGCCACATGCTTTGGGGACAGCCTTGCCATGCCTAGGGCTCTAAGCACTAAACTGGGTTTCCAGCTCATGGATACCTTAACCATTTCAGCAATGGAAACCATATATTTGTCTTCTCTATCCCATTACTGTGGACAAAAATATCAAGCTCTAATAAAGCTGAGGCCCTAAAAGAAGTCACCTACATATGTGGAGGATAATGATCCAAAAAAGGGCCTTTTTTTCCACCTACCTTCTCAGAGGCTGAGTGCCGTCCCTGCACTGAGGACATGGCAGGTGGTGAGTGAAATAACGGGTCCTTCAAGTTGTAGCCTCACTGTGCTGGATTCTGGCCAGAAGTTGCTGTGCTAGGCAATGCAGGCAGGTGGGCATCAGGGCAGCCATTCTCTTATCTGTCTCCCAACAATGACATATAAAGCTAGGGATAACTTAAAAGGCTCCTATCACCCCCCCACCCCCCCAGTATTGGAGAGTAAGCTAACCACCCTTCTCAGATGAGAGCTCAGTCACTGGAGGTGCAGGGTCAAGACCATTCTGTGCCTAGGATCTCCAAGACTGTAGGTCTAACAAGTGAAAATAAGGGGCTCAGGCACCCTGGCCCGAGGGGCCATCCAAGATATGGGGGAATCTGGCCGCCTTTGTCAGTAACTGGCTGACACCCTCTGGGTGTATTCCATGATCAGTGAGCTTAGCTATTTGAAAGGTCAACCAAGTCAATTCTGTATATGGCAGCTTGGGACCTCTGAAGACCAGAGAAGTCCTTTCTGTGAACATGAGGCTCAGATACCCTAAAGGACAGAAATCTCTTAATAGTTTCCAAAGTTATTTGGGACTCCTGATTTCCTGCCAAGGTGGCAGACAGCACAAGCCACTGATCCCCTTGCCCAGAAACTTCTCTGGAGAAACTACAGAGGGAAATATGAGTTCTAGAAACTGCATCACAGTGGTGAAGACCCATGGGGAGTTGGAAGGTGGTTGTTAACTGGCCTGAGTTTTGAGTGGTGGATGGCTGGAGGCAGCAAATACAGGAGAGGTTGGAGATTTAAGTTCTGGCTGTTACCTCTCCCCCACGTTGCCTTGTCTGCCCCCTCACTGCAGAAATCATCCAAACCACTGGTCCAGGTGTCTGGGGGGAGGGCTAGTATCAGGGTGTCAAGAACCCTGCTGAGAAGAGGAAATGAGCAGCCAGAGCAGTGATTACTCCTCCACTGTCCCCCTCCAGACACAAAGGCTGGTGGTACCACTTGGGAAATGACCCCCCCTCTTAGGGTTTAAAGATGAAACTCTACCAGCAGAATTGTCAGGTAATGTGATCATAGATGCAAGTGAGAGCTCTGCTTGCATGGTGCTGGGACTGTCCACCATCTGGCCCATCTCCCTGCACATCCTTTTATCCCTTGGACTCCAAGTGATTAACCAGAGTCAAGTCTGGCTTTCAGCATTCCCTCAGTACAGTTACCAGCCAGAACAGCTGCCACGTCAGGGTAATGTATACACCAGAGCAGTATAACTACATCCAGTGAAAAATAAACTGGACATATTAGTTATCTATGGGCTTCCCAGGTGGCACAGTGGTAAAGAACCTGCCTGCCAATGCAGGAGACGAGGGTTTGATTCCTGGGTCAGGAAGATCACCTGGAGAAGGAAATGGCAACCCAGTCCAGTATTCTTGCCTGGAAAATTCTATGGGAGAGCCTAGTAGACTACAGTCCATAGGGTCACAAAGAGTCGAATGTGACTGAGCATACATGCACCTTAGTTACCTATTGCTGTATAACAAATCACTGCCAAACTTAGCTTAAAACAACAAATATTTATTTTCTCAGTTTCCGAGGGTCAGGAATCTGGGAACAGCTTAGCCATGTAGTTTTGGCTCAGGGTCTCTTCTGAGGTTTCGGTCACGTTCAGCCAGGATTGCAGTTAGCTGAAGGGATGACTTGGCTGAAGGACCCACTTCTAATATGGCCTACACAGAGCTGTTAGTGGGAGGTTTCCCCACATGAGCCTCTCCAATCAGGCTTCTCAGGACATGTGGTCCCAGAAGACAGGCAAGAGATTGTGACCGTGACAGAACTGCAATGTCTATTATAACTTAAGCTCTGAAATGGCATACAACTTGTATTTTCTTGGTCACATAGGCCAACCCTAGTACAACATGGAGGAGAACCACACAGGATGTAAGTAACAGGAGGCAGAGATCATTGGGGGCTATGTCAGAAGACTGGCTACCACATGGGGTGATACACAATATCTGAAGCAGAAGTACTGGGACATACAGATGAAGACTTTTAAATAACTAAAGTAAGAAAAAAATAGAAAACAGGAACAAGAAATATAAAAAGGACTCAAAATATTAGGTATGGGTATGATAGAAAAAAAGAAATAGAAAAATAACTATAAATGGAGAAGATGAAATGAACTATCTTTTAACAATACAAAAAATATTTAGAACACAGGGACCCTCAATGGATTTTTTAAAAGTTTCAACAGTATACACACACAAAGTTTAGGGATGTTGATGAGAATGAAAGTATGAAGAAAAAGTAGAGTAATAAAAGCTCAAAGAAAGCTGGGATAGACATCCTAAAGCTAACAAAATTTCAGATCATGAAAGACAAAGAAGGATATATACTTATTGGCAAAGAATATATATGTCTACCATAAACACATTCTCGTAAGGAGACCTGAACAATACTTTTTTTTTTGCAGGACAAACAGGATAATTCTCATTTTTCCTTAAAGATACAGTAGAAGTTTTATAATTCAGTATGATTAGACATGATTTATAATTTTAACATTAAAAAAATGACAACAGAAACAAATAACTAGTACAAATTATAAAACAAATAGAGCAAAGAGAAACTACCTTTCTGATCGAAACGTACCACAGGTATACTTCCTTAGAAAACTTTCTAAGATTTCTAAGCTAAAACTTCTTAGAAAGGGATCGGAGGAAAGCCTTTAATCTCAAGTATTTAAACTATTCCTGTATCCACTAAATGCTTTCACCAACTTGTTAATCAAGTGCTTCCTAAATTTAGGAACCAGTGACCAAGTGGCCTGAAATAAGTCTTGATCTTATCTTTCCAGCTACAAATTATTACTACTTCAAGAAAACAAAATATTTTCTAAGCAACGTTAAG EMBV3_11218 ATAAAGCCAGTATGATAGCCATGATGGCAGGTAGGCTTTAAACCGGCCGGAGGCATCCGC Variant GeneID:534558|DERA:NM_001076028:41_cdna 681^793 1 EMBV3_04496 GeneID:534558 5 GENE DERA MGC126989 2-deoxyribose-5-phosphate aldolase homolog (C. elegans) EMBV3_18829 TTCTACGGAAGAGTCAAGATAGAAATGTGAGAGACGTGGTGTATGACGTGGCCAGCCAGG Gene GeneID:523017|C14H8ORF38:NM_001105389:51_cdna UTR3_Alt 2 NULL GeneID:523017 14 GENE C14H8ORF38 NULL chromosome 8 open reading frame 38 ortholog EMBV3_41053 TCCTGTGACTTTGCCCCTTTAAGAGCTGCCTGGTGCTAACCACCCTCCCTGGATTTGAGT Gene GeneID:517425|SLC25A45:XM_002699342:213_cdna Constitutive 0 NULL GeneID:517425 29 GENE SLC25A45 NULL solute carrier family 25, member 45 EMBV3_08063 CTGCCACTGCCATGATGCTTTTGAATACTCCCCCTGAGATACACGCAGGTTTTCCTCCAG Gene GeneID:505469|FOXN3:XM_002691110:28_cdna UTR3_Alt 2 NULL GeneID:505469 10 GENE FOXN3 NULL forkhead box N3 EMBV3_16914 TGTACATGGGGGCCTCTTAAAATCATTCTGGGGGCATGGAACCCCAAGGAGTAGACAGAG Gene GeneID:506441|DCTN5:NM_001024484:329_cdna UTR3_Alt 3 NULL GeneID:506441 25 GENE DCTN5 MGC3248 dynactin 5 (p25) EMBV3_02608 CGTATGTGGAGAGAGTGAAGATACCCTTGGATCATGGGACCCTGTTAATCATGGAAGGGG Gene GeneID:514579|ALKBH3:NM_001037602:63_cdna Constitutive 1 NULL GeneID:514579 15 GENE ALKBH3 MGC134125 alkB, alkylation repair homolog 3 (E. coli) EMBV3_29158 ATGAATCTCCTGGACCCCTTCATGAAGATGACCGACGAGCAGGAGAAGGGCCTGTCCGCC Gene AF278703.1 NULL 0 NULL NULL NULL GENE SOX9 SOX10 Bos taurus transcription activator Sox9 mRNA, partial cds. EMBV3_38884 GAAAATACAAAACAGAAATCACAGCTGCCTCTTCATCCTTCATGGGAAGCAAGCCGGCGG Gene GeneID:617136|SRFBP1:NM_001105449:32_cdna Constitutive 0 NULL GeneID:617136 7 GENE SRFBP1 MGC151955 serum response factor binding protein 1 EMBV3_35579 GATAGAGCCCAGAACAAAGGTGAAAATGCAAGACAAATCCAGAGGAGGCAGAGCCAAGCG Gene BVT0102_072111 + 0 NULL GK000028.2:13325277-13411015 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33002 ACAGTGTTTCTTTGTTTCTTTCTCTCATGCATGGGGCCTTGCTCTGTCCAGGCTGAAGTC Gene GeneID:531606|SRXN1:XM_002692428:414_cdna Constitutive 1 NULL GeneID:531606 13 GENE SRXN1 NULL sulfiredoxin 1 homolog (S. cerevisiae) EMBV3_08290 GACTCGACTGAGCGACTGAGCATCGGTATCTGAAAACAAGTCCACCCCAAAGTTAAAGCC Gene BVT0102_178542 + 0 NULL GK000004.2:9620568-9660516 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180786 TCONS_00180789 TCONS_00180787 TCONS_00180784 1 XLOC_110477 Coding TCONS_00180789 XLOC_110477 Coding Coding GATAD1 4:9613747-9625313 j TSS135497 5438 1 TCONS_00180789_9 221 0.59139389481427 5 0.530220492866407 6.24709038023393e-22 5.29966104276282e-05 2.79091158741718e-20 4.03456862909814e-05 7.96160943906543e-05 4.49080709882352e-06 3.65170606742888e-05 6.82414742373305e-15 5.97879815889846e-05 1.54880725993625e-22 8.91675528705142e-07 1.58520102664126e-06 1.96948544368771e-05 5.21777002645335e-05 8.20510237805384e-07 0.00174296578230833 0.000675879275727318 0.00139418468129279 4.0721913260566e-05 0.000199515479986942 3.89002084680877e-17 0.000647901976757953 3.00777933209155e-05 0.000825651271079221 0.000202092643837988 2.86187591132788e-10 1.58717200596913e-05 0.000151005217235637 2.62006430967568e-05 0.000192191886128731 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1662 87.99 0.241632953291651 NM_021167.4 GATAD1 Homo sapiens GATA zinc finger domain containing 1 (GATAD1), 0.0 843 91.82 0.107760205958073 1 coding 0 0 0 0 0.0874515366754864 0.572386618338379 0.00676910353185473 0.905851707718216 TTTTGGTAGCACCCGGACATCTGAGGGTACTTACAGTAAGCAGGAAATTCACAGGAGGTCCGCTCGGCTCAGAAACACTAAATACAAATCTGCTCCAGCTGCTGAAAAGAAAGTTTCCACTAAAGGGAAAGGGAGAAGACATATTTTTAAATTAAAAAATCCCATCAAAGCTCCTGAGTCCGTTTCCACCATAATCACTGCAGAATCAATCTTCTACAAGGGAGTCTATTACCAGATTGGAGATGTTGTTTCTGTAATTGATGAACAAGATGGAAAACCCTACTATGCTCAGATCAGAGGTTTTGTCCAGGACCAGTACTGTGAGAAGAGTGCAGCGCTGACGTGGCTCATCCCCACTCTCGCTAGCCCCAGGGACCAGTTCGACCCTGCGTCCTACATCGTGGGACCAGAGGAGGATCTTCCAAGGAAGATGGAATACTTGGAATTTGTCTGTCATGCACCTTCTGAATATTTCAAGTCACGTTCATCACCATTTCCCACAGTTCCCACCAGACCAGAGAAGGGCTATATATGGACTCATGTTGGACCTACTCCTGCAATAACTATAAAGGAAACAGTTGCCAACCATTTATAGTTTAAAAAGTAAACCTGGATTTCCAGTTCCCTTGTATCTGTACCACTGTAAGACATGCCACATGTTTCTTTAATGAAATTCTTGGATGGAAAAATGACTAAAGTAATCACTAGCTTGTTTATTACTAGTCACTTAGAAAATTAGGTAGAAAAGAATTAAATATATTTTGAAATGAAGTATTACATACACATTAAGTGTGTATATCCTCCCAGGCAAATACTGTCATTTCCAGGGAGACTATTAGGAACAGGTAGTGTCTATTTTTCTCCTTAATTTATTTCTAGAAACTCATAAAATAGATTGTATTTTTCTATAAGAATAAAATATTAATTTAGATATAAATTTCTAACCAAGGGCTAAATCAAGTAAAATATAGCTGTGATCCACAATATCTCTCACAGTATCTCTTAAAAAAGCTTTATTTTATTATCTAGAAAATATATTAACAAACTGTTGACTGCTTTATTAAGGAAAGTGACTGGTGGATGATTTTTATTAGCCCAGGCATTTAAAAACTTTCCTCTAATTCTTCTGTAGTAGGGAGAAATTCAGAATCATTTGGTTGATTTTAATAGAGCTGCTCTTCACTGCTCTGACCTACCTTCTCAGTCGGAATGAGGCTTCATCAAAATGTTAGCCTTATATTGTGGACAGTTAGCTTCACTGAACACACAGGAAATATGCTGTGTAGGCACCCCAGAGCAGTAGTTTCTTGACCGCACCGAGGACTAACATTGGGCAGCCATAAAAATGATTAACAGGTCATTAGCATTGATATCTTTTAGGATTTGAAATAGCTCAACTGGAATCCCATCACCTCCACTAGCTTTGTTCATAGTGATGTTTCCTAAGGCTCATTTGACTTCACATTCCAGGATGTCTGGCTCTAGGTGAGTGATAACACCATCATAATTATCTGAGTCGTGAAGATCTTTTTTGTATAGCTCTTCTGTGTATTCTTGCCACCTCTTCTTGATATCTTCTGCTTCTGTTTGGTCCATACCATTTCTGTCCTTTATTGTGCCCATCTTTGCATGAAAATTTCCCTTGGTATCTCTGATTTTCTTGAAGAGATCTCTAGTCTTTCCCATTCTATTGTTTTCCTCTATTTCTTTGCATTGGTCACTGAGGAAGGCTTTCTTATCTCTCCTTGCTATTCTTTGGAACTCTGCATTCAAATGGGTTTATCTTTCCTTTTCTCCTTTGCCTTTCACTTCTCTTCTTTTCATAGCTGTTTGTAAGGCCTCCTCAGACAGCCATTATGCCTTTTTGCATTTCTTTTTTTTTTAAATTTTTTTTATTTTGCATTTCTTTTTCTTGAGGATGGTCTTGATCCCTTTCTCATGTACAATGTCACGAACCTCTGTCCATAGTTCTTCAGGCACTCTATCAGATCTAATCCCTTGAATCTATTTGTCACTTTCACTATATAGTTGTAAGGTGTTTGATTTACGTCATACCTGAATAGTCTAGCAGTTTTCCCTAGTTTCTTCAATTTAAATCTGAATTTGGTATTAAGGAGTTCATGATCTGAGCAGCTCCTGGTCTTGTTTTTGCTGACTGTATAGAGCTGCTCCATCTTTGGCTGCAAAGAACGTAATCAGTCTGATTTTTCAGTATTGACCATCTGGTGATGTCCATGTGTAGAGTCTTCTTTTGTGTTGTTGGAAGAGGCTGTTTGCTATGACCAGTGCGTTCTCTTGGCAAAACTCTGTTAGCCTTTGCCCTGCTTCATTCTGTACTTCAAGGCCAAATTTGCCCATTAACTCCAGGTATTTCTTGACTTCCTGCTTTTGCATTCCAATCTCCTATAATGAAAAGGATGTCTTTTGGGTGTTAGTTCTAGAAGGTCTTGTAGGTCTTCATAGAACTGTTCAACTTCAGCTTCTTCAGCATTATTGGTTGGGGCATAGACTTGGATTACTGTGATATTGAATGGTTTGCTTTGGAAACGAACAGAGATCATTCTGTCGTTTTTGAGATTGCATCCAAGTACTGCATTTCAGACTCTTGTTGACTATGATGGCTACTCCATTTCTTCTAAGGGATTCTTGCCCACAGTAGTAGACATAATGATCATCTGAGTTAAATTCACCATTTCCAGTCCATTTTAGTTTGCTGACATTCCTAAAATTTCGATGTTCACTCTTGCCATCCCTGTTTGACCACTTCCAATTTGCCTTGATTCATGGACCTAACATTCCAGGTTCCTATGCAGTATTGCTATTTACAGCATCGGACCTTGCTTCTGTCACCAGTCATATCCACAGCTGCGTGGTGTTTTGCTTTGGCTCCGTCTCTTCATTCTTTCTGGAGTTATTTCTCCACTGATCTCCAGTAGCATATTGGGCACCAACCAACCCAGGGAGTTCATCTTTCAGTGTCCTATCTTTTTGCCTTTTCATTCTGTTCGTGAGGTTTTCAAGGCAAGAATACTGAAGTGGTTTGCCATTCCCTTCTCCAGTGGACCACGTTTTGTCAGAACCCTCGACCATGATCAGTAAATTTGGAAAACTCAGCAGTGGCCACAGGGCTGGAAAAGGTCAGTTTTCATTCCAAACCCAATAAAAGGAAATGCCAAAGAATACTCAAACTACCGTGCAATTGCACTCATCTCACATACTAGCAAAGTAATGCTCAAAATTCTCCAAGCCTAGCTTCAACAGTACATGAACCGTGAACTTCCACATGTTCAAGCTGGATTTAGAAAAGGTGGAGGAACCAGAGATCAAATTACCAACATCTGCTGGATCATCAAAAAAGCAAGAGAGTTCCAGAAAAACATCTACTTACGCTGTATTGACTCTGCCAAGGCCTTTGACTGTGTGGATCACAACAAACTGGAAAATTCTTCTAGAGATGGAAATACCAGACCACCTGACCTGCCTCTTGAGAAACCTATATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGAAACAACATACTGGTTCCAAATAGGAAAAGGAGTATGTCAAGGCTGTCTATTGTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAAACGCTGGGCTGGAAGAAGCACAAGCTGGAATCAAGATTGCCTGGAGAAATATCAATATCCTCAGATATGCAGATGCCACCACCCTTATGGCAGAAAGTGAAGAAGAGGTAAAGAGCCTCTTGATGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACTAAGATCATGGTATCCGGTCCTATCACTTCATGGGAAATAGATGGGGAACCAATAAAAACAGTGACAGATTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTCAGCCATGAAATTAAAAGACACTTGCTCCTTGGAATAAAAGTTATGAGCAACCTAGACAGCATATTAAAAAACATAGACATTATTTTGCCAACAAAGGTCCATCTAGTCAAAGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCGCAGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAGGGAGATCCAACCAGTCCGTCCTAAAGGAGATCAGTCCTGGGTATTCATTGGAAGGACTGATTGCTGAAGCTGAAACTCCAATACTTTGGCCACTTGATGCAAAGAACTGACTCATTTGAAAAGAGCCTGATGCTGGGAAAGATTGAAGGTGGGAAGACAATGGGATTCCAGAGGATGAGATGGTTGGATGGCATCACCGACTCAATGGACATGAGTTTGAGTAAACTCTGGGATTTGGTGGTGGACAGGGAGGTCTGGTGGAGAAGGCAATGGCACCCTACTCTAGTACTCTTGCCTAGAAAATCCCAGGACGGGGGAGCTTGGTGGGCTGCCGTCTGCAGTCGCACAGAGTCGGACACAACTGAAGTGACTTAGCAGCAGCAGCAGGGAGGTCTGGTGTGCTGCAGTCCATGTGGTCACAAAGAGTTGGACATGTTACAAAGAGTCAGACACGTTGCAAAGAGTCAGACTCGACTGAGCGACTGAGCATCGGTATCTGAAAACAAGTCCACCCCAAAGTTAAAGCCATCTGCTGTGGATTCATCATAACAGGCCTAAAACAGTGTTTGAGATTTAGAAGGTCAGGCACAGGAATTCTAGTCAGGATTCAGGGACAGGTTTTACTTCAAGGGCAGGTCAGCTGCGTCAGGGAGCAACAGCTTCAAAGTGGGAGAAAGTGGGGCTTACATGTACTTGCCTCCTCTCCTCTTCTGAGCTGACCATTATTTCCCAACCCCAGGAAAATTTACCAGAATCTAATTTAATTACAGTGATTTTGAATTGTAGCAGTTTTAACTGTTACCATTTTTATACACAGTTATGGTTTATTAGTTGGACGAAAGTTATGATTTGTATATTGTAGATACATAGCTGTATGTTATAATCTCTTTTCACAAAAGTTGTTGTAAAATTGATTGTAAATACCATTGTAAATAACTAAATGCTAGTATTCAGAGTTGTGGATTAAAATGTATTTTTCCCAATATATTTACTTTGAATTTATCTCATTCATTTGTTTCATGTAAATAAGGGTTTTCCACCCCAAAATGGTGTAAGTAGAACACACTAGTGTTGTAGTACTCGTGATTTGGTTGACAGATTCGTCATCAATATGTTATAGATATTAGGATACTCAAAGAATGACTGATCAATAAAATGAATACAAAATAAGATATTTATTAAATGAAATATTTTTAAACCAGTGAATAAACTGACCATTTGTTTATAAATTGGTGGATACTTGTGTAGTATCTTTTAGAATTAAGATTGAATTTTCATTTGCCTCCTT EMBV3_00029 CCCCTGTACTGCTATGCAGGTTCTTCTGGCTGCTCCCTTCTTGACAATGTGGTTGAAAAA Gene GeneID:786072|SCGB2A2:NM_001101297:133_cdna Constitutive 0 NULL GeneID:786072 29 GENE SCGB2A2 NULL secretoglobin, family 2A, member 2 EMBV3_32511 TTCGAATCTCCTGTGTGGACACCAGTTGGGTTGAAGGCTTGGGTTTCTTCCTGGCCATTC Gene GeneID:522955|LOC522955:XM_002707830:70_cdna Constitutive 0 NULL GeneID:522955 7 GENE LOC522955 NULL similar to olfactory receptor 225 EMBV3_13325 TAGCTGATATAGACTTCTAAGATGAGAAGAAAATGACAAATTGAATAGGACTCAAGCTGC Gene GeneID:538466|TECTB:NM_001083733:69_cdna Constitutive 2 NULL GeneID:538466 26 GENE TECTB MGC139051 tectorin beta EMBV3_20545 AAAGGTGTGAATGTGTTTGGCAGTTCTTGGTACTGTTCGTTTCAAAGTTTATTTTTATGT Gene GeneID:281212|CXCL2:NM_175700:17_cdna Constitutive 0 NULL GeneID:281212 6 GENE CXCL2 CXCL1 GRO1 MGSA chemokine (C-X-C motif) ligand 2 EMBV3_17692 CATCCACAGCTTACTCCCTTCTGTACAGAGGCTCCCAGGACAGTGCCAGTACTTGGGCTT Variant GeneID:540516|ERI3:NM_001046479:275_cdna 207^358 5 EMBV3_19661 GeneID:540516 3 GENE ERI3 MGC134375 PRNPIP ERI1 exoribonuclease family member 3 EMBV3_28219 TGGGCCCTTGGTGTCAGCCACTCACTGTTCCAGCTAGCATTCATTGTTAATTTGCCCTTC Gene GeneID:784925|LOC784925:XM_002690766:530_cdna Constitutive 0 NULL GeneID:784925 10 GENE LOC784925 NULL similar to olfactory receptor, family 4, subfamily F, member 29 EMBV3_08233 TGGTCATCCACGCAACCGCAGACGAAAAAATCCATTTCCAGCACACGGCAGAGCTCATCA Gene GeneID:281123|DPP6:NM_174040:559_cdna Constitutive 0 NULL GeneID:281123 4 GENE DPP6 MGC152462 dipeptidyl-peptidase 6 EMBV3_17138 ATCCTGGCCTCTTTGTCCACCTTCCAGCAGATGTGGATCAGCAAACAGGAGTACGACGAA Gene GeneID:515610|ACTA2:NM_001034502:34_cdna Constitutive 0 NULL GeneID:515610 26 GENE ACTA2 MGC127800 actin, alpha 2, smooth muscle, aorta EMBV3_30448 TCACTTTCTCCCCATATTTGAACAAGGGTGTCTTGTGATCTCACTCTGCAGGAGGGCCCC Gene BVV0102_186435 - 1 EMBV3_27977 GK000029.2:49957636-50027264 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16123 TGTTGCAGCCCTTGGTTCCAGAGAAGTGTGAGACTGAGCTGGCGGTTAAGGGGTTAAATT Gene GeneID:614788|HSF4:XM_002694813:674_cdna Constitutive 0 NULL GeneID:614788 18 GENE HSF4 NULL heat shock transcription factor 4 EMBV3_19283 GAAACTGAAGGAAATACAGTTACAGGAGCGGGAGGCAGCCCTCAAGGCCAGGGAAGAAAG Gene GeneID:523998|NEK2:NM_001046270:75_cdna Constitutive 0 NULL GeneID:523998 16 GENE NEK2 MGC137163 NIMA (never in mitosis gene a)-related kinase 2 EMBV3_30158 CAGCAGGTAAAGCAACATGATAAATGCCCACCAACCCAAACAAAAGAGGAGGAAATAGGG Gene BVV0102_072970 + 1 EMBV3_38207 GK000012.2:76587391-76639695 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15289 CTTAAGGACCTGGGCTTTGTTCTTCAAGGAGCTGTGTCCCACAGTTTCAGGGGACTTGAT Gene GeneID:517246|LOC517246:XM_002698141:528_cdna Constitutive 0 NULL GeneID:517246 25 GENE LOC517246 NULL similar to cytochrome P450 CYP3A24 EMBV3_04514 CTATGAGAACCGAGTGACCTTCTCGGATACTGGCTATGCATCCCCCGTGAAGTCAGACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13420 GCAGGGGTTCCCACCAGTTTGGAAGGATTGGCGCTTGCACCTTTTCATGTACAGCATTAA Gene GeneID:540633|KDM5B:XM_002694202:713_cdna Constitutive 2 NULL GeneID:540633 16 GENE KDM5B JARID1B lysine (K)-specific demethylase 5B EMBV3_42247 ACGTGCAGCTGTTTGACCTGATGAGGAGGATGTTAGAATTTGACCCTGCCCAGCGCATCA Gene GeneID:505499|CLK3:NM_001034248:43_cdna Constitutive 3 NULL GeneID:505499 21 GENE CLK3 MGC128892 CDC-like kinase 3 EMBV3_12248 GATCATCGGCTATGGCTGGTTCAGAGGGAACAGGATAGATCAAAGAGCTGCGATTGAAGC Gene GeneID:522128|LOC522128:XR_084613:738_cdna Constitutive 0 NULL GeneID:522128 18 PSEUDO LOC522128 NULL similar to carcinoembryonic antigen-related cell adhesion molecule 1 EMBV3_41541 CTGGGATCAGTGGATGGCTTTATGCTCACACCAGTCACCATGACCTTCCCCTTCTGCAAA Gene GeneID:788323|LOC788323:XM_002689127:106_cdna Constitutive 0 NULL GeneID:788323 7 GENE LOC788323 NULL similar to Olfactory receptor 2T29 EMBV3_34182 ACAGACATGAGAAGAATTGTGGTTCTAGTTTCATTACATTCATAGCCTTTCACCTCAGGG Gene GeneID:515307|RBM7:NM_001034487:80_cdna Constitutive 0 NULL GeneID:515307 15 GENE RBM7 MGC129092 RNA binding motif protein 7 EMBV3_20132 AAGCGGCCAAGCAAGTCGGAATCAACGACATCGATGTTCTCGAAGCCACCGATTACTACA Gene GeneID:100299343|LOC100299343:XM_002683930:3_cdna Constitutive 0 NULL GeneID:100299343 Un GENE LOC100299343 NULL hypothetical protein LOC100299343 EMBV3_00083 CAAAGGCTATGAAGCTGTTTGGTGGGACAAGCGCAGGGATGTTGATGCCATTGCTCTCAC Gene GeneID:781671|LOC781671:XM_002688408:88_cdna Constitutive 0 NULL GeneID:781671 6 GENE LOC781671 NULL similar to KIAA0063 gene product EMBV3_26760 CAAAAGCCCAACATCAACGCAGTGGCCACGCTGGAGAAAGTCATCGAGATCCAGAGTAAA Gene GeneID:504242|HDAC5:XM_002696040:322_cdna Constitutive 0 NULL GeneID:504242 19 GENE HDAC5 MGC134463 histone deacetylase 5 EMBV3_37946 CAGTGAACGGCGGAGGCTGTATCCCCCGAGTATTTGCTGAGCTGTTTGACCCTGTGATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34895 TGTCAAAGTAAGTTTTGGTGAATGCTATGGATGGAAGTGGTATGTTCCAGTGCTGTGCGG Gene GeneID:512018|BOC:XM_002684774:291_cdna UTR3_Alt 2 NULL GeneID:512018 1 GENE BOC NULL Boc homolog (mouse) EMBV3_15520 CCTGATCACCCACACCGAGGTTTTGAAACATGGATGACCGCGGGCCAGGGCATCATGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38643 TCGTATGTGCAGACACAAGTCTGATCGAGCTTCTAGGTTTCATCCTGGCCAACGTCAGCC Gene GeneID:615014|LOC615014:XM_002690447:311_cdna Constitutive 0 NULL GeneID:615014 10 GENE LOC615014 NULL similar to olfactory receptor C6 EMBV3_10016 GAGGTCAGTACCAGAACATGAATTCCATCCTTGTCAAGAACCCATCAGGGCATTCTTTGT Gene BVV0102_235983 - 1 EMBV3_04140 GK000006.2:7208211-7225023 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42798 GCTTTGCCAAGTGCTTTGAGATTTCGGATGCGGATCAAGAACAATGAATACAGTATTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06197 GCTGTATGACATAGTGCTGGCACTGATATTATCCATCATCTTGTTCTGGACACTTGTGTA Gene BVT0102_007646 + 0 NULL GK000004.2:21345066-22042158 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183351 TCONS_00183350 TCONS_00183352 1 XLOC_111136 Coding TCONS_00183352 XLOC_111136 Coding Coding ETV1 4:22039196-22145015 = TSS136846 5277 1 TCONS_00183352_5 477 0.0735266249763123 14 0.950263660246839 0.000613692134207745 0.0015548557137752 0.000669462045965547 0.000705924057979166 0.000212579835600491 0.000604714415157087 0.000378309638690434 0.000847111591888078 0.000815364911229882 8.71841010075034e-05 6.50031681819985e-05 2.57464799385069e-05 0.000261224452674473 8.09520504411506e-05 0.000260802572173891 0.000170060179101207 3.16109487791692e-11 6.56977907279698e-09 0.00067669729446594 0.00251899859092525 0.000130331665955462 1.17572980050302e-11 2.59123649805889e-12 4.24048421547117e-07 0.000427258141740089 0.000334927505634582 0.000493420390395514 8.11343565544519e-10 1.21497182897777e-07 1.00706689670432e-11 XM_005205203.1 ETV1 PREDICTED: Bos taurus ets variant 1 (ETV1), transcript variant X2, 0.0 7319 100.00 0.768808034868296 NM_004956.4 ETV1 Homo sapiens ets variant 1 (ETV1), transcript variant 1, mRNA. 0.0 5779 87.17 0.882129998104984 TCONS_00183352_5 sp|Q2KIC2|ETV1_BOVIN ETV1_BOVIN ETS translocation variant 1; 0.0 995 100.00 0.9979035639413 2 coding 0 0 0 0 -0.10414356416967 0.4045003136168 -0.0133308038226884 0.804937306867818 GCTCTGTCAGAGGCGCTTTCGGCTTCCAAGGGGGAAGTGCTGGGCAATAATTAATGTTTTTATTAAAATTGGAGGGAATTTTTTGCAGCCGTTCGCCTAGCGTGGCTTTCAGTCCCGTTAGGTGCAAAGCAAGTCTCGCTGATCGCCATTGCTAGTTTTGCACACGTTTGCGAATCAGAGCTGCCCGGGGTACACCGACCGCGCAGGGAAACATCGAGAGTGAAAATAAATACATCGCCTCTTGTTCGAATTTTTGCTACTGAGGAAAATATGTAAATTGTGAACTCTCTTGGCTCTCTTTGGATCCAGGTTGATAGAAGTCCAGATTCCGAGGAAATCTCCAGCTAGATGCTTAAAATATAAAACACTGAGCTGAGATTTGCGAAGAGCAGCAGAATGGATGGATTTTATGACCAGCAAGTGCCTTACATGGTCACCAATAATCAGCGTGGGAGAAATTGTAACGAGAAACCAACAAATGTCAGGAAAAGAAAATTCATTAACAGAGATCTGGCTCATGATTCAGAAGAACTCTTTCAAGATCTAAGTCAATTACAGGAAACATGGCTTGCAGAAGCTCAGGTACCTGACAATGATGAGCAGTTTGTGCCAGACTACCAGGCTGAAAGTCTGGCTTTTCATGGCCTCCCACTGAAAATCAAGAAAGAACCCCACAGTCCATGTTCAGAACTCGGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAATTCAGCTATGGAGAAAAGTGCCTGTACAATGTCAGTGCCTATGATCAGAAGCCACAAGTGGGAATGAGGCCCTCCAACCCCCCAACACCATCCAGCACTCCAGTGTCCCCCCTGCACCATGCATCTCCCAACTCAGCTCACACTTCAAAGCCTGACCGCGCCTTCCCAGCTCACCTCCCTCCATCGCAGCCCATCCAAGACAGTAGCTACCCCATGGATCACAGATTTCGCCGCCAACTTTCTGAACCCTGTAATTCCTTTCCTCCTTTGCCAACAATGCCAAGGGAAGGACGTCCCATGTACCAACGGCAGATGTCTGAGCCAAACATCCCCTTCCCACCTCAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGTGGTGCAGCCAGCCAAAGCTTCCCCCCTCCTCTGATGATTAAACAGGAGCCCAGAGATTTTGCATATGATTCAGAAGTGCCTAGCTGCCACTCCATTTATATGAGGCAAGAAGGCTTCCTGACTCATCCCAGCAGAACAGAAGGCTGCATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATGATACCTGTGTCGTCCCAGAGAAATTCGATGGAGACATAAAACAAGAGCCAGGGATGTATCGGGAAGGACCCACATACCAGCGGCGGGGATCACTTCAGCTCTGGCAGTTTTTGGTAGCTCTTCTAGACGACCCTTCAAATTCCCATTTTATTGCCTGGACTGGGAGAGGCATGGAATTTAAACTGATTGAGCCTGAGGAGGTGGCCAGGCGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTATGATAAACTTAGCCGTTCACTCCGCTATTATTATGAGAAAGGAATCATGCAAAAGGTGGCTGGAGAGAGATATGTCTACAAATTTGTGTGTGATCCAGAAGCCCTCTTCTCCATGGCCTTTCCAGATAATCAGCGCCCACTGCTGAAGACAGACATGGAGCGCCACATCAACGAAGAGGACACGGTGCCTCTGTCCCACTTTGACGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCACCCCTATAACGAAGGCTATGTGTATTAACACAGTGACAGTCAAGGGCCTCCTCGCGCTTCTGCTCTTTTGCAAGATGAAGAGAATCTCTGAATTCTCTTCAATATTTGATTTTTGTCATTTGTATTTTATTTTTAAATAATAATACACAAAAAGGGGCTTTCCTGTTGCATTGTTCTATGGTCTGCAATGGACTGCGCACTTTATTTGAGGGTGGGTGGGGGTAACCTAAACATTTATTCTGTGTAACAGGAAGATAATGGGCGAATGGGAGGGGGGATTGGGGTATTACTTTTTACTTAGGCTTGGGATGGGGTCCTACAAGTTTTAAGTATGATGACGCTATATCATGTTGATTTGATTTCATAACAACCTAGAAAATGTTCATTTCCTCTGGGTATCTATGGTACAGTTAATTCACATTGTGTAAATATCCACTTGGAGACTATCTGCCTTGGGCATTTTCCCCCTAGCATTTCTGTGTCTCCGCAAGGTGTACAAAAAAAAAAAAAAAAAAAAAACTACTGTAAAAGGCAGTTTAATTGTTAGAAATGACTGTTTTTGCACCTCTTGTAAAAAGTTATTTAGAGATTGCATTTACTGTTTTTTTGTTTTGTTTTGCTTTATGTATGACTCCCAGAGGAAAACCATACAATGGGTATTCTCTCTGAAGCTGAGTAATCACCATGACTGTAAATGAGGGGCACAATTTTGGACTCTGGCTCCAAACTGAGTCACAAGGCCAGTAGCAGTACACGTATCTGGTGCCACCTTGCTATTTAGATACAGATAATACTGTCCTTTAAATATTTTGAAACCCATTTCAGTTACATAATGATATTTTTCATGGTCCTTTGAGATCTTCATTTAAATGTTAAATCTGGGATCGCAATGAAGCAAAAAATATCTGTCTCCATTCACTTCCTTCAGTACATAAAAACATTATTTAATCAATAAGAATTAACTGTACTAAATCACATATTATGCTGTTCTAGATACAGCAAGCACTTCTTAAGAAAAATATCCAATACACTAAATAGGTACTATAGTAATTTTTAGACATGGTACCCATTGATATGCATTTAAACCTTTTACTGCTGTGTTATGTTGATAACATATATAAATATTAGATAATGCTAATGCTTCTGCTGCTGTCTTTTCTGTAATATTCTCTTTCATGCTGAATTTACTATGACCATTTATAAGCAATGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAAACCATTTATTGCTTAAAAAATAGCTTCTGCCATGCTATGCTATAAGCAGCTTTTATGCACATTGACAAAATGAAGAGTAAGCTTCAGCTTGCTAAGGGAAATTGTGGAAACTTTTGGTGAAATGGAAAATTATTTACAAACTGTTCAAGAATATGAGCAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCATCATCTTGTTCTGGACACTTGTGTAAATGTGATTGGATTGTTTGAAAGATTTAAAGATTTGAAGTTTCAAAGGTTTTTGTTTTGGTTTTGTTTTGCATTTGGAGGAAATAGTGAAAGCAGGGTATGTTGTTCTGTTTACCTTGACAAACCATAAGTAAATGGTGTTATAGTATCTCTGATTAGCTTGCTAAAATGATTCAAGCAAAAAACATAAATTTTGTTCACTATCTCAGAGGAAAAAAATTTTAGAGAGTCAATAGCAAAATGGATTTTTTTTAAAAATCCTTAACACAAAGCCAAAATCAACTTACAAAAGATTTTCATGATGAACACAGGAAAAATTGTTGAAAGATGATCTCCTGGCTACCCATTTTCCAACATGACATTGATCACAGTTCATGTCTCTAAACTCAACAGTTATTGGGAAACCCACATAACATAACCTATACTTACTCACATTTATTCCTACCAAAATAATTCTAATTTCAACATATTTATGTAACCTGTGATTTCAATGGTTGTTCTACATTTACATTATATATCATTAGGCCCATTATGGGTTAACAAATATGCCTTAAAAATCAGAATCCCCCCCTACCCACTATGCTCATGTGGCCATTTACAGTTCTTAGAACAAAAATGGATTTTAAAATATTCAGCTAAAATTTTATTGGAAAGAGAATTGACACATTTGGAGAAATTGAAAGTAGGTCTTTAAAATATGATCCAAGTGAAAATTATATTGAGAATACTTTTTCTTTTTTCTCTCATTTTCTTTTATTCTTTTAAAAATTCTAGTTTGATAGTGAAAAAGAATCGGACTATGAGCTATTTTAAAGAATCAAGGAAGAATTGGTATTGATTATATAGTATTTAAGGACAAATTATATATTTTGCTGTTTATGGTAGTAACTCACTGAATAAAATAAGTAATTGGCCAACATTAAGTATATTTCCAACACAGAAGGGTTCAAAACATTACATTATAAACTCTTTTGGGAAATGTATCTAAAGGGTTTTTTTTTTTTAAGTTCTGTTCTTATTCTACTTTTTGTTTGGTTGTATTTTTATTTTCAGATAGATTAATAAATCTGGCAGCTGATTTCTGCAAGATTCTTGTGTTTTGAATTTCTAATTGAATTGGCTATTCAAACATAGAAATCAATAATGTAACATTTTCCTTCAACTTGGTAAAAGAAACTAAAGAAGTATCTCCCCTCATGTTTGCTGCCTCTCGATGCCAATACCCAAGGGGTTAATTACAATAAAGAGTGGCACCTCTCAAATAAGTAATGAAAAATGACTTTCCTTAAGTTATGCCTATAAAAATGCATAAAAATAAAAATTCACACAGCTGACAGTGCAGAGCAGTTTCCTCAAATTATAGAAAGATCTTGGAGGTCATATACTTGAAGCTCCTTTTTACAGATTTTATCAGTTTCATGTTGATGTCATAACAAATTGCCACAAATTTAGTTACTCAAAGCAAGCAGATTTACCCTCTTATCATTCTAGAGATCAGAAGTCCACAGTGAGTCTAAAGGGGCTATAGAAGGATTCAGGGGACAGCCCCACCCTGTTGTCATTTCTGTCTCCTGGCTTTGCCACTCCAGTTTCTGCTTTTGTGGTGACATGTCTGTCTTTCTCCTCTGCTGTAGTCAAATCTCCCTCAGCCTATCTCTTGTAAGGACACCTGTGATTACATTTAGGGCCCACCCAGATAACCCAGGGTTATCTCCCTATCTCAAAATCTTTAACTTAATCACATTTTTCAAGTCCCTTTTGCCAGGTAAGTTATTCACAGGGATCAGGGGGTGGATAAAGGATATGAGGGGGAAAGGATGGCTGTTATTCACTTTACTACACAGAAGAAGACATGGCGTATTAAAAATACTGATTGACTTAACGTATGGACAAAAATGTTTTATTGATCTAGGATTAGAAATTACTAAAGATCGTTGGTTTTTTTACCATTAAGATAGTCTCACTATACTCTTTATAAAAGATAATAAGAACATCTTAGG EMBV3_15561 ACATTGTCAGCTTCTTATTACTGTCTACGTAGAATACTTTGTATAGAAATCAGAACTTTT Gene GeneID:505302|DUSP12:XM_002685847:379_cdna Constitutive 2 NULL GeneID:505302 3 GENE DUSP12 NULL dual specificity phosphatase 12 EMBV3_31920 ATGATGCTCAACTCAGACACCATGGAGCTGGACCTGCCTCTCACCCACTCTGAGACCGAG Gene GeneID:530196|NHLH1:XM_002685866:6_cdna Constitutive 0 NULL GeneID:530196 3 GENE NHLH1 NULL nescient helix loop helix 1 EMBV3_39625 GACATGGTCTCTGATGACATGAGGAACTTTGCGGAGCAGCTGAAACCTCTGGTTCACCTA Gene GeneID:540695|MED18:NM_001076235:254_cdna Constitutive 1 NULL GeneID:540695 2 GENE MED18 MGC142376 mediator complex subunit 18 EMBV3_30552 TGACCCTCAGAGCTCACGGGAGGCTGCTCTGACAAGAGGGCACAGGCCTTTTCTCATTAA Gene GeneID:317663|CYB561:NM_174837:200_cdna Constitutive 2 NULL GeneID:317663 19 GENE CYB561 MGC140653 cytochrome b-561 EMBV3_00764 GGAATTTCACTCCAAGAAAGAAATTCCCATTTTAAAGGGCATAGCACAGCAATCTGCAAC Gene GeneID:100124519|NKRF:NM_001102553:2_cdna Constitutive 1 NULL GeneID:100124519 X GENE NKRF MGC137773 NFKB repressing factor EMBV3_37109 ACATTTGGACGCTGGAAACGACCCACAGGATAGCCCTGTTCGCCAGGAAGTGGAACCAGA Gene GeneID:510471|MBOAT4:XM_002698699:33_cdna Constitutive 0 NULL GeneID:510471 27 GENE MBOAT4 NULL membrane bound O-acyltransferase domain containing 4 EMBV3_26750 CAGGATTCTGGGCAAGTCAGGAGTTTGTGCTCCATCCTGCAACCACAGAAAAGTTTGCAC Gene BVT0102_151248 + 0 NULL GK000021.2:31030193-31063698 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120967 1 XLOC_073308 NonCoding TCONS_00120967 XLOC_073308 NonCoding NonCoding - 21:31032560-31033251 - TSS90233 691 2 TCONS_00120967_2 78 0.160636758321274 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000547690281556623 0 0 0 6.14748704532932e-50 0 0 0 0.000317578754564383 0 noncoding 0 0 0 0 CCTTCAGCTCGACGCGTGACCTTGGGCCGGTGACTTCTCCAAGCCTCAGTTTCCCCACTCAAGGTATGAGAGAGCTTTCCAGTTAGAAGATTCTCGCAGGCGTGTCTCTTTCTGCTCCCCTTTCCTCTCTCTCATTCAGACTTCTTGCTCTTGGCCCCAGTCTGGACCCAGACCCCTTCCCAACCACTCATCCCAGAGCCCACATTGGCGCTGAGATGGAGTCCTTAAACGTGGGCTGGAGGGAGGACTCTCTCACCCCTCAAAACCCGGGAAGCCGCCGAGGAGAGTGAGTCTGTCAGCAGAAATGAGCTGGGTTGGAAGTGAAGCGCCTCAGTACCCAAATACAATTCTGGGTTGGGGATGTCTTGTTACCTATTGGGGTCTTTCCTTCTGGCCCCAGCATGGAAATAATTGCACAAGAAGTCAAGCCAGGTACCAGTCTTATATGGTCACCTCTCCGAGCTCCCTTAGGCCCCAGCAACCACCCCTTTAGACCCCTCCTAGGTCCCTCTGCTTCCAGAGTTGGGGAGCTGTCCAGATCATATCCCAGTGCCCTCCCACCTATGTGCAAACTTTTCTGTGGTTGCAGGATGGAGCACAAACTCCTGACTTGCCCAGAATCCTGGCCAGCCTGCTGAGGCTCTTTTGCTGCCCTGCGCACTGCAGCCACAGCAGAGCTATCCTCCTTCTC TCONS_00119105 TCONS_00119106 TCONS_00119107 r 3' 2369 TCONS_00119105 TCONS_00119106 TCONS_00119107 r 3' 3059 EMBV3_39713 ACAGACTCAGTAGCTGTGGTTCATGGGCTTCGTTGCTCCTTGCTGTGTAGGATCTTCCCA Gene BVT0102_055984 + 0 NULL GK000029.2:45288013-45299518 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00167817 1 XLOC_102653 NonCoding TCONS_00167817 XLOC_102653 NonCoding NonCoding - 29:45292411-45293241 - TSS125795 830 1 TCONS_00167817_2 87 0.950602409638554 1 0 0 0 0 0 0 0 7.02615341103964e-06 0 0 4.95722207894971e-06 0 0 5.5311634056639e-05 0.000255035735609493 7.68441768579238e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005206931.1 SLCO1B3 PREDICTED: Bos taurus solute carrier organic anion transporter family, member 1B3 (SLCO1B3), transcript variant X1, mRNA. 5e-23 113 76.79 0.197590361445783 XR_248953.1 LOC101927700 PREDICTED: Homo sapiens uncharacterized LOC101927700 (LOC101927700), misc_RNA. 3e-07 60.8 78.67 0.0879518072289157 0 noncoding 0 0 0 0 -0.359268288751642 0.0885388443042397 -0.192473427636137 0.0186126874654505 CTCTCACCCCCTGCAATGGAAGCATGGAGCCTTAACCATTAGACCACTAGGGAAGTCCTGAGAGAAATTTAATGATGTTGACCCTGGAGACTAGAGGGATTCCTAAGGATGCCAGCAACCACCGGAAGCTACAACAGCTGGAAGAAGCGAGCAATGGTTTCTCTCTTAGTCTTAAAGGAACAAGGCCCTGCTGACACTTGATTTCAGCCCAGTGCTACTAATTTTGGACTTTCAGCCTGCAGAACTGTGAAAGAATAGCTTTTTTTGACATATAATTTATTTACTGGCTGTACTGGGTCTTCGTTGCCACATGGGCTTTTCTCTATCGCAGCGAGCGGGGGCTTCTCCTGCATGTTGCTGAGTGCTGTAGGGTGCATGGGCTCAGTGGTCACAGTCCCCAGCTTCTAGAGCACAGACTCAGTAGCTGTGGTTCATGGGCTTCGTTGCTCCTTGCTGTGTAGGATCTTCCCAGACTAGGGTCAAACCGGTGTCTCCCGCATTGTCAGGTGGATTCTTCAGCGCTGAGCCACCAGGAAGCCCTTGCCACATCACATTCTATTGTTTTAACCGACCCAGGTTTTGTTACAGCATCCACGGGAAACTAATACAGTTACTATTCAATCACATTAAAGTAACACACTTAAAGCCTAGTTTCCTTAAGGCTTTAACTCTACAAGGTTTATTGATCTGTTTATAAATCTAGTAAAATAAGAGTTATTATCTTCACCTTTTCTTTGATAAATGCTGGCAGACTACATTGGACTCCTAAAATCATACCCATTTGCAACTTAAATTCCCTCAAACTTTAAAAAAGTTGCATTTGTATATTT TCONS_00164011 TCONS_00164010 TCONS_00164012 TCONS_00164013 TCONS_00164014 TCONS_00164016 . 3' 4398 TCONS_00164011 TCONS_00164010 TCONS_00164012 TCONS_00164013 TCONS_00164014 TCONS_00164016 . 3' 5227 EMBV3_41270 AAGGCAATAGCAGGACAATTAAGGGAGGAGGCTGGGCCCTGTTCAAACCATTTCTCACTC Gene GeneID:510399|MGC128008:NM_001034380:260_cdna UTR3_Alt 2 NULL GeneID:510399 3 GENE MGC128008 NULL hypothetical LOC510399 EMBV3_25536 TGATCCTGGAAGGGTGCGCAGAGGAGTCCGGGAGAGGGAAGCAGACTTCCACTGCCATGA Gene BVT0102_310999 + 1 EMBV3_34596 GK000011.2:105614898-105673813 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42771 AAGAGACGCCCATGGCACCGAGAGGGAGCAAGTGCACTCCTCCAAACCACAAAAGAGTAA Gene BVT0102_027872 + 0 NULL GK000006.2:107664680-107672979 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14811 TCTAAAATTATAATGCAGAATTTTGTATAGTTTGGAGAAGAGTTGAAAAATCTCTTTGAA Gene GeneID:538628|RUNX1T1:NM_001099385:70_cdna Constitutive 3 NULL GeneID:538628 14 GENE RUNX1T1 NULL runt-related transcription factor 1; translocated to, 1 (cyclin D-related) EMBV3_02105 GGCGGGCTAAAGGGGGAAGTAGTTGAAGTCCCTAGAATCATGCTCCCCAACTCCATACTT Gene BVV0102_163747 + 0 NULL GK000011.2:2537852-2563172 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026629 TCONS_00026627 TCONS_00026625 TCONS_00026628 TCONS_00026626 1 XLOC_015084 Coding TCONS_00026625 XLOC_015084 NonCoding Coding - 11:2549865-2557799 - TSS19066 2829 1 TCONS_00026625_2 83 3 0.643766544812807 3.8697849989502e-133 9.7158435146003e-67 6.92089923908108e-70 2.36290130153935e-86 3.75574185726068e-05 9.23039426475934e-107 0.000141638265931533 3.60725345162878e-164 0.000453277624131984 0.000190605525335513 0.000210369663141144 0.000236356642147294 1.42289921712429e-05 0.000382438382233065 5.95648481747332e-73 0.00255026584630534 0.000443737940128466 0.00132817250141588 0.0004461241688191 3.63562794064093e-120 0.000115425286871604 0.00160773768576301 0.000306193467191137 3.15963896801818e-38 1.6217109698593e-62 0.000389759415930322 1.56727941346442e-41 0.000260484680499396 0.000415707933518891 0.000455830748919746 XM_005212359.1 KIAA1310 PREDICTED: Bos taurus KIAA1310 ortholog (KIAA1310), transcript 0.0 5075 99.82 0.998939554612937 NM_001115016.2 KANSL3 Homo sapiens KAT8 regulatory NSL complex subunit 3 (KANSL3), 0.0 1029 68.46 0.99858607281725 0 noncoding 0 0 0 0 -0.487344035373501 0.0367537872346778 -0.0226988560731022 0.661132150298375 AGAGCCTGGGCGCCGTCACCACGGGCGCCGGCAGCATTGTCCGTGCCGTCCCTGTGGCCACCGCCCTCTCCTCCTTGGGTGCTGCTCCTGGCGGGAAGCCCACAGCCATCCACCAGCTGCTGACCAACGGGGGCCTCGCTAAGTTAGCAAGCAGCCTCCCTGGCCTGGCTCAGATCTCTAACCAAGCGTCAGCTCAGGCTTGAAGGTCCCCACCACCATCACTCTGACCCTGCGTGGCCAGCCCAGCCGGATCACCACACTGAGCCCCGTGGGCACAGGAGCAGCCCCTTCAGAGGAGCCCGCCTCCCAGGCACTGCCCTCCAGCTCACAGCGCCTGCCTCCAGCCCCCTGAGGACACTGTGCCACATGTCTTCCTTTGCCAGGCTGGTGACGGCTGCTGCACGGTGAGGCCTGGGCGGCGTGCGGTCCTGCTGAGCTGTCCACTTGTCCACAGACCTCTTTAACACAGTCATTCTTGCCTCTCTGTCAGCTGTCTTCAGGGCTGGACCTCCGGGTCTTTTGTAATCATGAGGCAAGGTGATACAGCACCAGCAACGGGACCCTGTTCCCCAGTCGCTACTGGTCTGATTCCCAGGATCTCCAGGTCCTCAGCAGACCTGGTTGGGCACGAATCTGAGGCACTGCTTCCCCATCAGGAGCTGTAACTTGACCCAGGAAGCAGTGTCAGACTGCTCACTGCATCGTGATAAAGGAGCACCTCTTGGAAGTCTGTGCCTCCCTGCGCCAAGTTAGGAGGAGGCATCTGTGTGGTCCGGGGCTGTAAGAGTTGAGGTCAAGAGCCCTGTGCTGAGGGCAAGGATCATCCCGGCCCCCCAGCTGGCGGCTCAGTGCCAGGGGGCTTGTTCTGTCCGTCATAGTCCACCGAACAGTCGTGGGAGAGGTCTTTCCAGGCAGCACTCACCATGGGAGCCACGCTGGATACCAAGTGCCTGTTGAGGCCTGGGGACTCCACTCCAAACCCACGAGAGGGTACAGAGACCCGGACTGTCCTCTTTGAGTCCCTTTGGCTGCTTACAGACCCGGAGACAGCAGCTGCCGGGAGGAGAGAGCCAGCTTTTCTTTTTTCCATCATGTTTGGGCAGTTCTTGTATTCAGAAAGGCTGAAGAGGACGAAGGGGACAGCAAACAGAGTGACCTGGAGGGCACGTCAGTGATGAAGACGCTCGGGGCTTGAGGCTTTGCATCTGGCACCTAAGGAATTGTGGATGCGACTGGAGACGAGAATTTGCCGGGCCAGAGGAAAGAAGCCCCAGCCCTGAAATTTCTGCGCTCAGTAGTGGAGCAGGGACAGCTGCTAAGTGAACATCTTGGCCGTTCGTCCCATGAAACTCTGACATCAGGACAACAGATGCCATGCTTCAGTGTTTCTGTTTCAGCTCTGTGTGTGATTCTCATCTTCTTGCTCAGAAGTGGGAGGATGATTGGCATTGACTTTCCTATTCAGGGTGCTCAGTACCAACCTGAGTCCTGGAGGTGGAGGTCCCTGGAGAAGTGATTACTGAGGATGGAGCCCTGAGCCCTTCCTTACCTCCTCACGACACTTGTGTGCAAAAGTATTTTTAGATTTGGTTTAGAATCCAGAGCTGACTTCTTTCCCTATTGTACTCTAGAAAGTTTCCAACCCAGGTGTAAGGCATCCCACGTATGACTCTTCAGTATCTGTGGGCAGGGAGGAGCCACAGCATACCATGGCTGGACCTGTGGTGAGGGTCCTGACCTGGGGGCGGTGTGCATCCAAAGCAAGCCACCTGTGTTCAGTCCAGGAGCCTCAGTCCAGTCTGAGAGTGGCAGCCGGGAGGGAGCCTGTGGTATAGAGGAATCTCAGACAAGGCAGACGGGGGTGGGGGGTGGGCGTCCAGGAAGGGCCCGGGGCAGTGCACAGCCCAGGCATGGAGTGGGCAGGTTATACACTGTAACCCCCCTGCCGACCTCCTGCCGAGCTGGTCTCTGAAGTGATTCACACAGAATTAGCCTGCATCTTTGCATTAGTGGGCAGGTAACTGCTTTCTGAAATTCAGGCAGCATTCAGTAAGTTGGAGGAAGATATGAAATGTGAAAAAGACGTCCAGGGTCAGGGGTTTGGTGACTTGACAGGTAAGATCATAACACACCAAGAGGAACTGAGGACAGTGAGACCTGTGTGAAGCTTTTAGCAGTCACTCCCAGCAGGTTCCTGAACAACCCATTCGTGACTTAGGAGTGCATTCTAGACAGCACTGGGGGGCTGCTCTGAAAGATGCTGACCCCGCTGTGGGCTGGGCCAAAGGAGAAGCTGAAAAAACATCCCGCGTTTGTCTGAATCCTAGTAAGCTTCCCACGAATGATTTCCTGAGGTTTGGCTTATACACCGGGAAGGATGCCAAAGCTGGAGAAGGGGAGTAGTGAGAACCTTGGTTCTGCTGCACTGTGGAGGGACGGGCTAAAGGGGGAAGTAGTTGAAGTCCCTAGAATCATGCTCCCCAATTCCATACTTCTGTAGCCACATTTCTTGAAGTGGAGAAGGAGCTTTCCTCTGCCAATCACGTAGCAGACCTAGAGTCCCTGACCTCGGAAGGTGACAGTACTGGCCAAAAGTGTAGAAGGATCCACAGGGCTTTAGCTGAGTTCTTGGGTGACAGGTACGTGCTGATGCCCTGTGAAAGCAGTCTTTGTGTGAAGACGAGGTCGCTGATGGAGGAAGACCTGTCCTCGGCTCCAGCGCTGGGACAGTCCTGGGCTGGATGGGGTATCGAGCTGAGCTGCTGTGACAGTTCTATTTTCCATTAGCCAAAACAATTAAATAAAAACAGATTTTGGACTGCTTCAACA TCONS_00026628 TCONS_00026630 TCONS_00026630 s 5' 0 TCONS_00026628 TCONS_00026630 TCONS_00026630 s 5' 0 EMBV3_33432 GCTGGGTTGACTTCCTATCCATTTGACACTCTGATATCATGTACACAGGCACGCTTGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03164 AAATCTGGGTGTTTGGGGACCGGGAACCATGGTGAAAGAGTTGGGGAAAGGGGAAATGAA Gene GeneID:516565|ASAM:NM_001098043:125_cdna Constitutive 0 NULL GeneID:516565 15 GENE ASAM MGC154969 adipocyte-specific adhesion molecule EMBV3_02529 GCAAAGGAGGCAGCATGATACCCTTGGTGTTTTCTAGATCCACCCCCTCCCCAGTATTAA Gene GeneID:614408|PLDN:NM_001076325:125_cdna Constitutive 1 NULL GeneID:614408 10 GENE PLDN MGC142343 pallidin homolog (mouse) EMBV3_13056 GCTTTGCCAGAGACACCTCTTTTCTCGTGTCTGGAGGGTTCGACAAGACCGTGGCTATTT Gene GeneID:518737|WDR88:XM_002695000:213_cdna Constitutive 0 NULL GeneID:518737 18 GENE WDR88 NULL WD repeat domain 88 EMBV3_20879 CTGATAGAAGAGACAATCCTAAACCAAATGCATTCTAAGGGAAGTAAATCGCCAGACTGG Variant GeneID:613835|MRPS36:NM_001035438:3_cdna 107^162 1 EMBV3_08809 GeneID:613835 20 GENE MRPS36 MGC128564 mitochondrial ribosomal protein S36 EMBV3_40970 GGAAGGATAGTGGCTCAGTGCAGGTTGTGAAGATGTGGACTTTGGGAGTCATCCCCTCAT Gene BVV0102_100734 + 0 NULL GK000028.2:33931778-34461259 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39300 GTCGAAGCGGTGCTGGGCGCGCTCCCCTTCCTCTCCGACGCAAGACTGTCCCGGCCCGGA Variant GeneID:614279|MGC133632:XM_002692797:93_cdna 190^238 3 EMBV3_35441 GeneID:614279 14 GENE MGC133632 NULL hypothetical protein LOC614279 EMBV3_37334 TGTTCCCTCAAGGACAATGCCACCCTCTTGACTCAGGTGCAGACGACGATGTGTGAAAAC Gene GeneID:527201|DCTN2:NM_001034558:1061_cdna Constitutive 0 NULL GeneID:527201 5 GENE DCTN2 MGC127636 dynactin 2 (p50) EMBV3_18417 GTCACGGGGAACGCCAAAAAGCTGGAGGAGAAAGTGGTTTCTGGAGAAGTTAAAGCCTGA Variant GeneID:613653|ITPA:NM_001076282:1270_cdna 81^277 5 EMBV3_17002 GeneID:613653 13 GENE ITPA MGC137583 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) EMBV3_04602 ATCACCCAGGGACCCATGACCGTTCTCTTGAGGCAAAGGAGAGCAACCTGACAACAAACA Gene GeneID:529593|GABRB3:NM_001099380:32_cdna Constitutive 0 NULL GeneID:529593 21 GENE GABRB3 NULL gamma-aminobutyric acid (GABA) A receptor, beta 3 EMBV3_16707 GGATAAGGTCACACAGCGCTGTGATTCAGTTGTAAGCAAGCCAGCTCTTGCATAGACATC Gene BVT0102_410089 + 0 NULL GK000001.2:57591093-57672615 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24731 TCACCATGTATGCCTGAACCAAGCTGGCCACATCGAAGGCATGGAGGATCACTCAGGATT Gene GeneID:281663|CAPN3:NM_174260:112_cdna Constitutive 0 NULL GeneID:281663 10 GENE CAPN3 MGC160055 SKM-CALP calpain 3, (p94) EMBV3_26619 CTGGGGACATGTGCGGCTCCGTTCAGTCCTCTCCAGTGTGTCCACAGCCCCCACTTCTGA Gene GeneID:507398|SFTPB:NM_001075311:50_cdna Constitutive 0 NULL GeneID:507398 11 GENE SFTPB MGC140803 surfactant protein B EMBV3_39497 CATATGCATCAGCATCTCCTGGATCCTGCCCCTTACTTACAGTGGCGCCGTGTTCTACAC Gene GeneID:616737|LOC616737:XM_002690228:17_cdna Constitutive 0 NULL GeneID:616737 9 GENE LOC616737 NULL similar to trace amine associated receptor 6 EMBV3_07189 GCAAGCAGAATGAACAAAGCAATAAAGATCAGAGCAGAAATCAAAGACGCTGACAAATAG Gene BVV0102_080600 + 0 NULL GK000027.2:36865782-36877979 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33952 TGCTCCATTGCATTAGGCCAAAATGCTGGGAGTTTTCCCTTCTTTACCTTTTCTATCATG Gene GeneID:539524|HSPB8:NM_001014955:249_cdna Constitutive 2 NULL GeneID:539524 17 GENE HSPB8 NULL heat shock 22kDa protein 8 EMBV3_31203 ACGACGTTCGACCTATCCGTAGCATGAAAAACTTCTTACAGAGCAGGCTTCTGCCTCGAG Gene GeneID:538292|TRIO:NM_001102212:29_cdna Constitutive 0 NULL GeneID:538292 20 GENE TRIO MGC154976 triple functional domain (PTPRF interacting) EMBV3_31030 CTGGTTTCAGAACAAAAGATCCAAGATCAAGAAGATCATGAAAAACGGGGAGATGCCCCC Gene GeneID:507415|DLX5:NM_001075313:30_cdna Constitutive 0 NULL GeneID:507415 4 GENE DLX5 NULL distal-less homeobox 5 EMBV3_07795 ATGAATAATTACCTAGATCCCCAAAAGCAGTCGGCTGTGTCGGCTGAAGCAGAGGTTGCC Gene BVV0102_127531 + 1 EMBV3_11044 GK000027.2:17503112-18071594 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155118 TCONS_00155123 TCONS_00155116 TCONS_00155117 TCONS_00155119 TCONS_00155121 TCONS_00155122 TCONS_00155120 1 XLOC_094647 NonCoding TCONS_00155123 XLOC_094647 NonCoding NonCoding LOC100848092 27:17784027-17786392 = TSS116134 802 1 TCONS_00155123_2 80 2 0.661590524534687 0.00420638325055325 0.0013893701615233 0.0017163193428904 0.00110318000216031 0.00460194837578356 0.001642191808485 0.00332111180092319 0.000941146102507834 7.68397162095506e-05 0.000741151033860397 1.63293678071003e-05 5.7973349403106e-05 0.000273692112045924 0.00219098014055622 0.00163749783391312 0 0 0 0.00390861797102222 0.00407245897964519 0.000692218969479338 0 0 0 0.00612871971695073 0.00358024184438591 0.00141845958037581 0 0 0.000313791028691633 0 noncoding 1 0 1 0 -0.472276755352929 0.0996951930517754 -0.00336663004412109 0.95104158403725 GTACAAAGAATGACAAAACTCTCTTAAGGCCACTTGGTTTCTCAGATTCTCAAAGGGAAGAAATAATGGATATTATTTAATAACAGAATTTCTAGGCTTAGGGCTGTGCGTTTGTGAGGAGCCCCAATTCATATTTCCATGGACCAAAAGGGCCCCTTTCCCACCAACGTGTGAAGCAATGGGAGGTGAGACCTCACCTTAAACACCAAGTATGTTCTCTGATCCAGCATAAAAAAGGCCCTTGAAATCCTTTTCCCCAGACCGCCACACATGTTGGTGGAAGGTCTCTCCTTTACTCGATGCTCAAACTGTCGAGTCCCTCGCTGCATGACCTGCTCCTCCTCTTCTGCTGAGGCCAAAATGTGTCAAATGGACAGATGGCTCTGCCAGAGATAGTCAGATTTTGTCAAATCAAGAAAATTAAAGCCAGGCCCTGTCATAAAAACACAGCTTATGGGTCTGCCGGATGCACCAGCGAAACCGGTCTCGTTCACAGCTGCACTCCCTCCTGGCATTTCAACGTTGGCCAAATGTTGATTCGAAGCATAACTGACTCAGAAATCTCGCAGGCAACCTCTGCTTCAGCCGACACAGCCGACTGCTTTTGGGGATCTAGGTAATTATTCATTTGACCTTGAAGTTTTGACGACTTTTATTTGTTATGAGCCCATGAATTCAAGATCCAGAAAAATGGTCATTACCCTTACACTGCATTCAAGCACATTATAGAAACAGAAGCGGTGGTAAATATAACACACCAAAAGTTACGGGCTTGCTACTGAAGGGGCCCAGACAGCATCAG EMBV3_13460 TGGCCTATTCCTGAGGCTGAGTGGCCAGCATGGACAGCTGAACTGGATTCTTTGAAGCTT Gene GeneID:615433|LOC615433:XM_002688415:129_cdna Constitutive 0 NULL GeneID:615433 6 GENE LOC615433 NULL hypothetical LOC615433 EMBV3_17368 CATCTCAGCACCTGGCCCTTCCACCCCCAGGTTTCTTGGCGGCCTGCTTGCTTTGTCCTC Variant GeneID:531059|ZNF415:XM_002695317:5_cdna 107^288 1 EMBV3_35317 GeneID:531059 18 GENE ZNF415 NULL zinc finger protein 415 EMBV3_30370 AACCTTGGCCTCCCCTTCAGCAGCTTCGACCACTCAAAAGCCCACTACTATCGCTATGAT Gene GeneID:539040|PCGF1:NM_001046447:48_cdna Constitutive 1 NULL GeneID:539040 11 GENE PCGF1 MGC134112 polycomb group ring finger 1 EMBV3_14996 ATCTAAGAAGGGCAGAGGCAAAGCCTTATCTACTTGTGCATCCCACTTTCTCTCTGTCTC Gene GeneID:100300844|LOC100300844:XM_002684696:13_cdna Constitutive 0 NULL GeneID:100300844 1 GENE LOC100300844 NULL similar to olfactory receptor 160 EMBV3_42610 CACGTGGTCTCCAGCAATAACCCTAAGCACCCATTCTGTGGGGATTCATTTCCAGAGTTG Gene GeneID:538685|ITPRIP:NM_001101178:201_cdna Constitutive 0 NULL GeneID:538685 26 GENE ITPRIP KIAA1754 inositol 1,4,5-triphosphate receptor interacting protein EMBV3_10412 TGCAGAATTCCATTAGTGATCCAGCATTTCCAAGGGAGAGGTATCAGAGTGCTGGCCCTG Gene GeneID:337919|MUC15:NM_176631:14_cdna UTR3_Alt 3 NULL GeneID:337919 15 GENE MUC15 NULL mucin 15, cell surface associated EMBV3_08854 CTGACTTCCAGCTACTTCTTTCCCACTGGGCGTTACAGCTCTCTGCTCAGAACCTCGCTA Gene BVV0102_155735 + 0 NULL GK000008.2:67867781-68113366 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33269 GTGACCAAGCGGAAGAAGAAAAAGGACAGAGACAAGGCAAAACTCCTGGAAACGATGGGG Gene GeneID:530319|LOC530319:XM_002695522:359_cdna Constitutive 0 NULL GeneID:530319 18 GENE LOC530319 NULL similar to mCG125076 EMBV3_23229 TCCTGGTTCATAGAAAGGATCATGTCAACTTTAATTCCACTGCAATCTATTCATAAGCAG Gene GeneID:782774|P2RY13:NM_001098152:71_cdna Constitutive 1 NULL GeneID:782774 1 GENE P2RY13 NULL purinergic receptor P2Y, G-protein coupled, 13 EMBV3_29364 TGATGGGCAAGAACACGATGATGCGCAAGGCCTGCTGCCACCACCGCAGCCCCAGCCAAG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 251^924 11 EMBV3_14209 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_32893 TTGCTCTGAGAACCAAGCAGGAACTCTACAACCCCAGTTTGCCTTTGTGAGGCATTAGTA Gene GeneID:532730|SEC22A:NM_001083462:71_cdna Constitutive 1 NULL GeneID:532730 1 GENE SEC22A MGC140086 SEC22 vesicle trafficking protein homolog A (S. cerevisiae) EMBV3_31447 CTCAAGTGTGCTTGGAGTGTGAAAAGTCTGAGGCCAGTTCCAAGGTCCCCTGTTGGCTCT Gene GeneID:519958|MAP3K7IP1:NM_001102057:70_cdna Constitutive 0 NULL GeneID:519958 5 GENE MAP3K7IP1 MAP3K7IP1 MGC159828 mitogen-activated protein kinase kinase kinase 7 interacting protein 1 EMBV3_17063 ACAAACAGCAAAGAATGAGGCCTTGGGACATATAGTTAACTGAAGCTCTCCCCCGACCCC Gene GeneID:784906|LOC784906:XM_002684928:73_cdna Constitutive 0 NULL GeneID:784906 1 GENE LOC784906 NULL similar to Probable G-protein coupled receptor 160 EMBV3_28349 TCAGAAGAAGGTGACATTTCAGAAGGCCCAAGAACACTCTGTTAAGACTGCCCGCTTACC Gene GeneID:516258|RG9MTD3:NM_001076859:29_cdna Constitutive 0 NULL GeneID:516258 8 GENE RG9MTD3 MGC143366 RNA (guanine-9-) methyltransferase domain containing 3 EMBV3_09069 GCACTGCACTCATGAAGCTGTCTACCCATTACTATGCCTTCCCATACATTATATTAGTAT Variant GeneID:509181|JKAMP:NM_001080247:76_cdna 461^642 1 EMBV3_10274 GeneID:509181 10 GENE JKAMP JAMP MGC139345 JNK1/MAPK8-associated membrane protein EMBV3_25840 GGAAGAGAAGTGCAAGTATGTGATATCCAGCTGCAACACCATTTTGAATTTGAATACCAG Variant GeneID:514209|ASNS:NM_001075653:42_cdna 113^386 1 EMBV3_22737 GeneID:514209 4 GENE ASNS MGC138980 asparagine synthetase EMBV3_39864 AGGCCTTCAGCCGCAGTTCATCACTCATTCGACATCAGATCATTCACACAGGAGAGAGAC Gene GeneID:529157|ZNF215:NM_001076882:2_cdna Constitutive 1 NULL GeneID:529157 15 GENE ZNF215 MGC142562 zinc finger protein 215 EMBV3_24029 TCCCGGTCATCATCTTGATATCCTGAAGGAAGATTCGGCCGCCTCGCTATGTTAAAGTGC Gene BVV0102_032476 + 0 NULL GK000029.2:19478930-20257013 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164613 1 XLOC_100272 NonCoding TCONS_00164613 XLOC_100272 NonCoding NonCoding - 29:19871160-19942535 - TSS123128 612 2 TCONS_00164613_1 40 0.245098039215686 4 0.991481491859781 1.00589844064266e-84 9.14936419618142e-05 0.000304192586084682 2.96203191849571e-39 1.94215128823709e-38 2.66259185279761e-05 0.000408258202974391 2.75740591834019e-58 5.01003197309032e-81 4.52934987225686e-264 0 0 4.06875451225218e-28 0 0 0 0 0 0.000897313358589003 0.000114786767935492 6.36795118488086e-147 0 0 1.66226223539283e-13 4.76021348917499e-72 0.000477753814023374 1.86499553080424e-54 6.71011700086513e-26 0 0 NM_174062.3 FTH1 Bos taurus ferritin, heavy polypeptide 1 (FTH1), mRNA. 7e-26 122 88.04 0.132352941176471 NM_002032.2 FTH1 Homo sapiens ferritin, heavy polypeptide 1 (FTH1), mRNA. 6e-14 82.4 80.72 0.117647058823529 0 noncoding 0 0 0 0 -0.449156903886505 0.137968142345844 -0.0831769501689356 0.304486292936767 AGGAGGAGGAGGAGTTGGCTCCACCCTCACTACCAGGACAGGCAGCAACACAAAACCCTTTGGCGTCTGCAGCCTCCGAGTTGCAGGAGGAGTCAGAGCAGCCAGGCTGTGAGGATGGGTGAGGGCAGCCCAGTAAAGGAGCGGTGACCACTCATGAGGACCAAACCTAACAGGGGAAAGGTGCACGGTGGACTTCCGGAGAAGCTGTCAGTCCCGAGCCGCCCGCACAGCGCACATTCCATTGCAGTCAGCCCATTCTCCCGGTCATCATCTTGATATCCTGAAGGAAGATTCGGCCGCCTCGCTATGTTAAAGTGCTGCATCGAGTGAAAAATGGAGAGCTGATATCAGTTTTGGACAGTAAATCTTCTCCCATGCTCCTGCCAGTTTTACGACTCTGGGATGACTTTCTCAAGAATCTGAGACCCATTCATCTGAAATCATCAAGAGAAGAGTATGCCTGTCTCCGAGCTTCTGTAGAAAGTTAGGAACTTAACTTTTGATAAGGACGGTTAGCAATACAGATGAACTAATCATAGAAATAAACAACTGAAAACTCAGAAATGACTCATTGTGTTAGCCCACCCCATTGACCATGTACCCCTTAACCCC TCONS_00164621 TCONS_00164622 TCONS_00164623 TCONS_00164624 TCONS_00164625 s 3' 385565 TCONS_00164621 TCONS_00164622 TCONS_00164623 TCONS_00164624 TCONS_00164625 s 3' 314441 EMBV3_26457 AGATCATCTCCTGAAGTTGAGGTCCTGGTGCTGTCCACACGCAGAAGGTTCTGTGTACAT Gene BVT0102_085385 + 1 EMBV3_22063 GK000018.2:2838861-2845658 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085232 TCONS_00085231 TCONS_00085233 1 XLOC_051820 Coding TCONS_00085232 XLOC_051820 Coding Coding TMEM170A 18:2844724-2858888 j TSS63699 3637 1 TCONS_00085232_2 144 3 0.74341594294994 6.41419393159806e-05 1.2524133316142e-11 9.17556851226561e-05 2.25502682173703e-05 5.71722932427925e-05 0 5.23650125384562e-06 2.04596563505394e-05 6.2412272490072e-08 0.00034484033190403 0.000125863979478446 8.5562418009495e-05 6.39006275888352e-05 0.000161667074452455 4.30219428530978e-06 0.00677535243500955 0.000482633243822726 0.00772467019837351 4.86976691982925e-12 0.000143888927353275 2.12674234215978e-11 0.0025577234099287 0.00255302195710474 0.00463079361979384 5.62410247667408e-05 1.91463768392302e-05 2.33298367745411e-08 0.000401289271201966 0.000413854703742267 0.00145556391368333 XM_005218378.1 TMEM170A PREDICTED: Bos taurus transmembrane protein 170A (TMEM170A), 0.0 6421 100.00 0.978553753093209 XM_005255795.1 TMEM170A PREDICTED: Homo sapiens transmembrane protein 170A (TMEM170A), 0.0 1036 75.14 0.406378883695353 TCONS_00085232_2 sp|Q9D342|T170A_MOUSE T170A_MOUSE Transmembrane protein 170A; 9e-90 262 96.53 0.993055555555556 1 coding 1 1 1 1 -0.0878447465821641 0.505622766003361 0.0322154119939385 0.533856357737789 TTGGCAGGGCCGTTGGGGTAGGAGGAAGAGGGCCCCGGCCGAAGGTGACGCTGTGGCTGCGGAGGTGTGGGGAGCGGAGCAGGCCGTACGCGAGCTCGCGCTGCGGCAGCATCTCGGGCGCTCTTCCCTCAGCGGCCCCTCGGGCGCTCTCCCTCAGCCCTCTGCGGTGAATGGCGGCGGGATGGAACGCGAGGGGAGCGGCGGCAGCGGGGCGTCGGCCGGGCTCCTGCAGCAGATCCTCAGCCTGAAGCTGGTGCCGCGGGTGGGCAACGGGACGCTGTGCCCCAACTCCACATCGCTCTGCTCCTTCCCAGAGATGTGGTATGGTGTGTTCCTGTGGGCACTGGTGTCTTCTCTCTTCTTTCACGTCCCTGCCGGATTACTGGCCCTCTTCACCCTCAGACATCACAAATATGGTAGGTTCATGTCTGTAAGCATCCTGTTGATGGGCATCGTGGGACCAATTACTGCTGGAATCTTGACAAGTGCAGCAATTGCTGGAGTGTATCGAGCAGCAGGAAAGGAAATGATTCCGTTTGAAGCCCTTACCTTGGGCACTGGACAGACGTTTTGTGTCGTAGTGGTCTCCTTTTTACGGATTTTAGCTACTCTATAGCACATGCCCTTGTGCTATGATGGTGAATCGGTTTTATAGAATCCTCAAAAATAATACATTATGGGATGTAGCGTTTTCTTAGTTCTTCAAACGGTATGAAGAACAACACTTCGGTCCTTTCTTCAGTTTGAAGTTCCAGGAATTAAAGATCTTTTTGGACTCATTGTTCTCAACCAAAAAAAAAAAATCAAGTTTCTTTTCTTTCTGTTTTTACATATTCAAATCAGGCAGTTTTACAGGTGCATCTTTACCCAAGCCCAGTCAGCAGTGCTTCTGGGTTGGCATCCTTCACACTGAAATTTACAATGTCCTGTGAGAAAAACGCAGCCTTGCGTGTTTCAGAGAAACTGTAGAACATATTGGTTTACTTCTGAGCACAGTAAACTGTACTGAAATCTTATTTGATCAAATCTTGATTAAAATTTGGCAAACCCTTGCCACATCTTCATGACAGTAAGTGCCAAGTAGGTTTTGGTCGAGCATAACGTTGAGAACAAATTTGGAGAAATAAAACACACACAAAACCTATAACTCAAGTAGTGGCTTCAGTTCCACTATTTAAATAAATAAAAGCTAACTCCTGAATGCTGTGACATTTTATGAATAATATTTTGACCTCTGATTATTTTATATATTTTAAGATATGTGAATTTCCTGTTTTGTACATTTTCTCAAAATAAGCTAGGTAATTGAGAATTTTTCCACAGAACTCCTGTATCACCTTTTCCTATCACTTTATAGTCTATTGATTTTATTTAGTTTAATTGGAAACACGCCCTATTAAATAGTTTGAATGGAAAATTCTCAGCCATATTGATCAGGATACTCACTGGACATTGAGACATACACACAGAAAGATACTTTAAACATTCTGTTACCTTTTTTTTAGTGACTTTGGTTTGCTCATGGCTCTTAAAAAATTGTAAAAGTGCAGCTTTAACTGGAATTAGGGGTTATTGATTTCCTAGTCTTAATGTGGTTACCTAGTGGTGGGTCTTAAGCCCATTTTACAGTGGTGGGTATGACTCCCAGAAAGTGCCTAAAGTGTAATTTTCAAATATACCTTCCACTGTGCCCTTTATATTTCCTTTCAAGAGAATCTATATCCTTAAACAAAATTAAATATCAGAGTTTTTTTTTTAAACCCAATTTTAGCTCTTTTAATTTTTCTTCGAATGCCTAGCTTTCTTTTTCATCTAAAGGCCTAAAAACTGTGACCTTCAAAAGAAAAAGGATTGCAAAAATTAAATATCTGACTTTATCCTTAACTGCATAAACTGGTTTGTATGAAATACAGTTGTTGTTATCTGTTTTCAAAATAGTTTCTGGTCATTAAATATGACATTTTAAAAGGAAAGTTTTCATTATGAGTGTGAAGCTACCTGCCCATAAGGTCATGTGCAGTGCTGTTTGATTTAAGCAATATGCACTCTGGCTTCTGATTAAAAATAGCCAGGAGATGGTCACAGAGAAAAATTAAAAAGGATCCGAAAAAGTAAGTGGACATTTTCTTTTAACTAATAGGCCATTAGACTACTTATCAAAATTACAGTAATAGATATACTCTAACGAGGTGAAAAATTGTAGGAGTTGTACACAGGCAAATATCCTTACAAATTCCCCAACAAGATTACTCTCCAATGCTCAAATCTTTCTTTCAAACAAATTTTTATGTCTTTAGCTCAAGACTCCATTTTTCAATTCAATAGTTGGATTTTGAAACGTAGCCCTTCAGCTTAAGAAGTTTTCCTTCATCTCTATTGAAAGATGTCCCAGCATTCTCACTGAAAACATTCCTTTGGATAGAGTTTCACAAATTGAGTATGGGCTAGTGGTCAGTGGGCTTCTCTCCCCAAAAACTAATTTTTCAACATATTGATCCATGGCTTAAATGTTTGGTTGCTTCACTTCTAGAGCCAAAACACAAGAACTAATGCATTTTGAAAGCTGTCTTTGTTTTCATCTGTTTCTTGTTTGATTATCCACTGTTTTTAAGAACTTCAAATGTAAAATGGATCTTCAGATTATTGAATGTTTCATCCATCCCAGTATGTGAACATTCTGTGAATAAATGAATATAGACTTTATATAACTTGAGCTTTGTGGCTTGAAATGTTTTCAGGAAGAAACTATTTGAATTATAAGGAATGTTTATTGTCCTTAAGGGTTTCTTTTTCTTTTTAATTTCTCACCTCAAATGCACAATTATTTGGGGGTGGTTGCTCAGATGAAAAAGTACTGGCATTTGTGTTGAACATTTTATTTTTTCACATAAAGCTTCTGAGACGTTTTGCCAACTCCTGACTTGCCTGGAGACACGTGAAACCACCCCTGCCCCAGCTATGCATCCACTTTTCTTTTAGTGGGAAGGAGAAACCCCCAACCATGAAAAGCTGATTTCTGGATTCTTTGAGATAAAGGTTTTAGGAGAAAAACATTTCATGTAAACTTAAATCCAATACAAATGAGTAATGAATATTCCAAGACAAAGGTGTCTCATTGTACTATTTACTAATCCAGAACATTACCTAGGAAATGTCTCAACTAGGGAGATAAAGTTCATGCAAGTAGCTATCTTTAAGCTCTTAGGTTTCCTAAGTCTTTAAATTGTATGTTAGCTTTTGATTCCAAAAGCTACTCTGGTTTGAATGAAGTTCTTAATACAACTGCAGTGCACACCAACCTTCCCTAGGAGATCATCTCCTGAAGTTGAGGTCCTGGTGCTGTCCACACGCAGAAGGTTCTGTGTACATGTGTTTCTGTTCTGTGCATTGTTACCCTGCTTGTGGTAAAGTCAGCTTAACTTTTTGTATTAGATTATTTCACTAAATGCTGCAGTCAAACTGATCAAATCTTTGTACCACAGAAAGTTATTTAAATTTTATTTTTCTACTGAAATTTCTAATTCTGGTATAAATGTTTATCAATAAAGATTACTTTCAACTCTGTGCACTTGAACTGATTTTTCTTTTTCAGTGGCCAATGAATTTAAGCTTTTGTAATGAAGATTTCCACCTTAAG EMBV3_24465 GTAGCCGCAGTGAAGCCAGCCGAATTCTGGACATGCTGGTGTCTACACGGCAGAAGAAGT Variant GeneID:540194|C5H12orf41:NM_001024571:107_cdna 470^584 1 EMBV3_14538 GeneID:540194 5 GENE C5H12orf41 C12orf41 FLJ20436 MGC133943 chromosome 12 open reading frame 41 ortholog EMBV3_27709 AGGTAATACACAACAGGTGGGGATTGCATATTGACCTTGGGGCATTTGGTCTCAGTCAGC Gene BVT0102_351553 + 0 NULL GK000006.2:34207340-35008570 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17839 TGTAGGATCATTAATGGAGAATCATTACATGAAAACATACCTTACAGCAGCCAAATACTT Gene GeneID:534742|SLC25A24:NM_001099066:152_cdna Constitutive 2 NULL GeneID:534742 3 GENE SLC25A24 MGC157062 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 EMBV3_07843 CGCATGGCAATGAATGCCTTTGGTGACATGGGTCAGTGTGGTTCTTGTTGGGCGTTTAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29776 CGACAGCATTTCAGTCCCTTGTGCATAGAGTAGAAAATTGGTAGTTAAAAAGCACCTGTC Gene GeneID:782059|SCYL2:NM_001102529:91_cdna Constitutive 0 NULL GeneID:782059 5 GENE SCYL2 MGC138084 SCY1-like 2 (S. cerevisiae) EMBV3_07582 CATGCACAAGTAGGACTGTTCTCGGACTTGTTTTCCTGTCCTTTGTGGACCCTACACGTG Gene GeneID:533137|SLC9A6:NM_001101146:30_cdna Constitutive 0 NULL GeneID:533137 X GENE SLC9A6 NULL solute carrier family 9 (sodium/hydrogen exchanger), member 6 EMBV3_08637 GATGAGGTTCTGTACAGCATTGCTGAAAAGGAACAAGCACATCATGATCGACCTGGGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07904 GCTAGGAAAAAAATATCAGTGTTTTGGTGCACCTTTTTGAAATGCAAAACTAGGAAGAGG Gene GeneID:615534|FNDC3B:XM_002684918:46_cdna Constitutive 2 NULL GeneID:615534 1 GENE FNDC3B NULL fibronectin type III domain containing 3B EMBV3_00040 GTCCAGAAAGGCAGACTCTGGGAGTCCTCAGGCTGCGAGACCTGGAATCATTGGAATAAA Gene GeneID:504509|ZAP70:XM_002691140:154_cdna Constitutive 2 NULL GeneID:504509 11 GENE ZAP70 NULL zeta-chain (TCR) associated protein kinase 70kDa EMBV3_19653 AAGATTCCCCAGCAGTTTCTACGACCTGGTCCACAAGTGTGAACACCACCACTACGCCCT Gene GeneID:787466|CRB3:XM_002688883:121_cdna Constitutive 1 NULL GeneID:787466 7 GENE CRB3 NULL crumbs homolog 3 (Drosophila) EMBV3_24184 CTGCAGAGTTTGTTTTTGCTGCCTGGGTTTCCAGCACTCTGGGCTTCTTATCACTTCCAC Gene BVV0102_076391 + 0 NULL GK000004.2:20622384-21343686 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183342 1 XLOC_111135 NonCoding TCONS_00183342 XLOC_111135 NonCoding NonCoding - 4:21193114-21312481 - TSS136843 308 1 TCONS_00183342_1 41 0.626623376623377 2 0.997436455942228 1.30565538058254e-17 1.27312903305233e-17 6.98350783384793e-51 2.97191037630855e-84 1.50744321299635e-23 0 0 0 4.4583638164433e-46 0 0 0 0 2.40930781871484e-10 0 0 0 0 1.73870546514558e-161 0.000547335176012992 0 0 0 0 8.84668958116624e-15 2.53927255661411e-14 5.61448163887197e-05 0 0 0 XM_002703511.1 LOC100296410 PREDICTED: Bos taurus uncharacterized LOC100296410 (LOC100296410), 5e-36 154 76.92 0.626623376623377 0 noncoding GCCTTAGGTGGACCAGGTGAAGATGGGATGATGCTTCCCAGGTGCTTCTCATCATGATCTTTTCCCCTTCCCTTCCCATCAGGAGATTCTTGAATCCTCATAGACCAAAGACTGGAGGCCAAGCATAGCAGAAGCCCAAGTCGGCGAAAGCTCCTGTGGTGGAAGCTCCTGTGGTGGAAGCTGAATGAGAAGAAAACCCAGCGCAGTGGAAGTGATAAGAAGCCCAGAGTGCTGGAAACCCAGACAGCAAAAACAAACTCTGCAGAAAGCTCATGCGGCTCAGTCTCAGATTCCAGGAGACCTCCGGT TCONS_00183349 s 3' 845707 TCONS_00183349 s 3' 726533 EMBV3_26144 CGACACCCACTTAGCCCCCAGCACCTCTGGGGCAGCCAGTAGCACCATGTCTGTGACCCA Variant GeneID:528055|ANXA9:NM_001035373:118_cdna 108^193 1 EMBV3_21808 GeneID:528055 3 GENE ANXA9 MGC128219 annexin A9 EMBV3_05325 CCAATGGCATCCTCAACGTCACCGCCGCCGACAAGAGCACCGGTAAAGAAAACAAAATCA Gene GeneID:281827|HSPA2:NM_174344:23_cdna Constitutive 1 NULL GeneID:281827 10 GENE HSPA2 HSPA3 MGC127701 heat shock 70kDa protein 2 EMBV3_14082 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29132 TAGAGATCAGCCCCAAGGAGATGAGCGTCACTTACATTGAAGCCTCGGGCAAGTCCCTCT Gene GeneID:517002|ACP5:XM_002688849:183_cdna Constitutive 0 NULL GeneID:517002 7 GENE ACP5 NULL acid phosphatase 5, tartrate resistant EMBV3_41229 CTTCTTTCCACCAAAGTAGGGAGTAGGCATCTGGTTGTCATGGAAACGGGGCTCTTCACA Gene GeneID:788113|LOC788113:XR_084650:34_cdna Constitutive 0 NULL GeneID:788113 25 PSEUDO LOC788113 NULL similar to Snf2-related CBP activator protein EMBV3_38714 ATTCCTGGGGGAAGGGGGACTTGGATTATGCCATTTCTCTGAGCCCAAGATAGAAACTTG Gene GeneID:100125237|PTPLAD1:NM_001103316:5_cdna Constitutive 0 NULL GeneID:100125237 10 GENE PTPLAD1 MGC166273 protein tyrosine phosphatase-like A domain containing 1 EMBV3_11297 TTCAAGACCATCGAGGACCTGCGGAACAAGGTTTGAGACAGAGCAGGCCCTGCGTGTGAG Variant GeneID:281889|KRT17:NM_001105322:30_cdna 521^603 1 EMBV3_08752 GeneID:281889 19 GENE KRT17 MGC159887 keratin 17 EMBV3_08841 GGGTCCCCAATGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTTT Gene BVV0102_163816 + 0 NULL GK000007.2:10557199-10604337 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00118490 TCONS_00012285 TCONS_00059696 TCONS_00165977 TCONS_00118456 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00233473 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00173459 TCONS_00072261 TCONS_00055707 TCONS_00082022 TCONS_00205117 TCONS_00204211 TCONS_00174806 TCONS_00031972 TCONS_00059695 TCONS_00118487 TCONS_00232824 TCONS_00251680 TCONS_00036106 TCONS_00229794 TCONS_00031759 TCONS_00000529 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00220566 TCONS_00061487 TCONS_00118040 TCONS_00239997 TCONS_00019195 TCONS_00010963 TCONS_00124524 TCONS_00216950 TCONS_00061490 TCONS_00123823 TCONS_00110449 TCONS_00174809 TCONS_00061485 TCONS_00242064 TCONS_00162767 TCONS_00018601 TCONS_00022895 TCONS_00107436 TCONS_00065412 TCONS_00010280 TCONS_00061489 TCONS_00125692 TCONS_00027918 TCONS_00118489 TCONS_00173458 TCONS_00092545 TCONS_00006385 TCONS_00006741 TCONS_00007850 TCONS_00197281 TCONS_00001865 TCONS_00166913 TCONS_00238581 TCONS_00036105 TCONS_00129710 TCONS_00198907 TCONS_00040981 TCONS_00061482 TCONS_00125637 TCONS_00219592 TCONS_00031886 TCONS_00246739 TCONS_00234240 TCONS_00087729 TCONS_00196823 TCONS_00174808 TCONS_00223565 TCONS_00118491 TCONS_00251851 TCONS_00132067 TCONS_00082029 TCONS_00145750 TCONS_00174805 TCONS_00056184 TCONS_00023655 TCONS_00171428 TCONS_00207933 TCONS_00188145 TCONS_00238985 TCONS_00188520 TCONS_00160961 TCONS_00089291 TCONS_00002600 TCONS_00207485 TCONS_00099018 TCONS_00070976 TCONS_00209974 TCONS_00246740 TCONS_00251625 TCONS_00118459 TCONS_00210913 TCONS_00204210 TCONS_00205113 TCONS_00037569 TCONS_00241019 TCONS_00001867 TCONS_00090382 TCONS_00132066 TCONS_00080713 TCONS_00092544 TCONS_00118488 TCONS_00198905 TCONS_00078426 TCONS_00087730 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00092546 TCONS_00205125 TCONS_00004603 TCONS_00228562 TCONS_00221350 TCONS_00056149 TCONS_00168038 TCONS_00001866 TCONS_00218901 TCONS_00009619 99 XLOC_105290 XLOC_072622 XLOC_072644 XLOC_007831 XLOC_036486 XLOC_100817 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_142955 XLOC_104695 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_104361 XLOC_044030 XLOC_033515 XLOC_050894 XLOC_124587 XLOC_124371 XLOC_018217 XLOC_142307 XLOC_154621 XLOC_021081 XLOC_139288 XLOC_018004 XLOC_000141 XLOC_120473 XLOC_151107 XLOC_103679 XLOC_133883 XLOC_036985 XLOC_072206 XLOC_146662 XLOC_009875 XLOC_006514 XLOC_076070 XLOC_131385 XLOC_075375 XLOC_066353 XLOC_148728 XLOC_099648 XLOC_009288 XLOC_013565 XLOC_063346 XLOC_040131 XLOC_005831 XLOC_077234 XLOC_015372 XLOC_056919 XLOC_001948 XLOC_002303 XLOC_003410 XLOC_118943 XLOC_000454 XLOC_101749 XLOC_145248 XLOC_078423 XLOC_120560 XLOC_024793 XLOC_077179 XLOC_132911 XLOC_018131 XLOC_143719 XLOC_052579 XLOC_118488 XLOC_136865 XLOC_154792 XLOC_080699 XLOC_033987 XLOC_014322 XLOC_103815 XLOC_126448 XLOC_114188 XLOC_145651 XLOC_114563 XLOC_097854 XLOC_054076 XLOC_000643 XLOC_126001 XLOC_059261 XLOC_042752 XLOC_128485 XLOC_154566 XLOC_129423 XLOC_021418 XLOC_147683 XLOC_055163 XLOC_049597 XLOC_120558 XLOC_047314 XLOC_148229 XLOC_001070 XLOC_138526 XLOC_134666 XLOC_033952 XLOC_102874 XLOC_132220 XLOC_005172 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_04201 AGTGGAGGCCTGTTTACCACTGGAATTAGCCACGAATGAGAGTTGCCTGGCTTCCAGAGA Gene GeneID:281856|IL12A:NM_174355:103_cdna Constitutive 0 NULL GeneID:281856 1 GENE IL12A IL12p35 Il-12_p35 interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) EMBV3_13595 ACATCTGAAGCCCCCCAGGATGTGACCTATGCTGAACTGGACCACTCAACTAGCAGACAG Gene GeneID:509574|LOC509574:XM_002695438:10_cdna Constitutive 0 NULL GeneID:509574 18 GENE LOC509574 NULL similar to leukocyte immunoglobulin-like receptor EMBV3_24336 GTGTCAGCGTAAGCTCTTCAAGGAGGGTGGGTATTTCAATGTGTCGCACAGGAAGGTGTT Gene GeneID:617157|MCEMP1:XM_002688834:138_cdna Constitutive 0 NULL GeneID:617157 7 GENE MCEMP1 NULL mast cell-expressed membrane protein 1 EMBV3_05376 TGACTTTAATGGGGGTGCATGGGGGCCTTGGGCCAGTGATGAGGAAGAAGATGAAGAAGA Gene GeneID:540390|ARSI:XM_002689292:129_cdna Constitutive 0 NULL GeneID:540390 7 GENE ARSI NULL arylsulfatase family, member I EMBV3_22759 CCAGTACACCACCATCCTCACCAGTAAAACCATCGGCATTTTAGCCTCTGTTGTTGTGGG Gene GeneID:507029|LOC507029:XM_002693160:93_cdna Constitutive 0 NULL GeneID:507029 15 GENE LOC507029 NULL similar to olfactory receptor, family 52, subfamily E, member 4 EMBV3_23141 TACAACTTCGTGGACATCGCTGATGCAAAGGTGGAACCTTCAGGAGGTCTTCTTAGAGCT Variant GeneID:505736|FLJ10803:NM_001034256:25_cdna 358^434 2 EMBV3_10048 GeneID:505736 4 GENE FLJ10803 MGC127762 hypothetical protein LOC505736 EMBV3_01459 CTCTGACCCCACAGATCCCCCCAAGTCGAAAGGCAGCAATGTCTACCATTATGCAGGTAA Gene GeneID:514011|LOC514011:NM_001100361:235_cdna Constitutive 1 NULL GeneID:514011 21 GENE LOC514011 NULL similar to putative ISG12(b) protein EMBV3_32401 GGATGGATGTCGCATGTACTTCAGTTTGAGGATAAAAGCAGAAAAGTGAAAGATGCAAGC Gene GeneID:504397|CWC27:NM_001075160:2_cdna Constitutive 0 NULL GeneID:504397 20 GENE CWC27 SDCCAG10 CWC27 spliceosome-associated protein homolog (S. cerevisiae) EMBV3_04943 CCTGGAGCTTCGGATGAAATGAAAATGGAAACATGATGAAGATATATTCACTGAATCAAC Gene GeneID:511190|RPS6KA3:NM_001098937:67_cdna Constitutive 0 NULL GeneID:511190 X GENE RPS6KA3 MGC160087 ribosomal protein S6 kinase, 90kDa, polypeptide 3 EMBV3_26925 GTCAGGTCCACTCTGAAGGTGACCCTGTGTCTCTTCCTGGACTTCTCTGGCCAGCCTTAT Gene GeneID:100336452|LOC100336452:XM_002696216:284_cdna Constitutive 0 NULL GeneID:100336452 19 GENE LOC100336452 NULL leukocyte membrane antigen-like EMBV3_43021 TGCCAGACAGGTTTGGAAGATGGTCTTTTTACCTCTTGGGGTGCTCAGTGCCTCAGTCAG Gene GeneID:617515|MGC139026:NM_001083778:63_cdna Constitutive 0 NULL GeneID:617515 17 GENE MGC139026 NULL hypothetical LOC617515 EMBV3_34165 CGCTCGGATGTTAAACGATGGGCTGGATTTGTTACCGATCTGAGTTCTTGGGCTCTACTC Gene GeneID:525522|ZNF677:NM_001102092:2_cdna UTR3_Alt 2 NULL GeneID:525522 18 GENE ZNF677 MGC152083 zinc finger protein 677 EMBV3_08873 AGGGCCTTTATGTCCAGCCTAAGAGGGTAGTTTCTTTAGAAAGAAGAACCTTTTTGACTC Gene BVV0102_047279 + 1 EMBV3_01649 GK000009.2:27540769-27991076 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35224 GGTCCACTCCTCTCTGGCCATGTGGTTTGCCCAGGACTTACAGTGGAATCAGTTTCAGTA Gene GeneID:531747|LOC531747:XM_002697288:82_cdna Constitutive 1 NULL GeneID:531747 23 GENE LOC531747 NULL similar to soluble adenylyl cyclase EMBV3_03503 TCCTGGAAGGACACTGGATTCTCCATTAGACAAGCTGCAAAATCATTCAGATCATGCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22723 GTGGGCGAAGACTTCCGGTGGTACTTGAAGGACTGGACTGACTATGACGAAAAGGCTCAG Variant GeneID:517857|C3H1orf123:NM_001038130:55_cdna 134^448 5 EMBV3_40760 GeneID:517857 3 GENE C3H1orf123 C1orf123 MGC133492 chromosome 1 open reading frame 123 ortholog EMBV3_39720 ACCTGTATCAGACTTAACGCTTAAAAGAAGAATTTGGAGGTGTCTGCTTACTATTTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00398 TCCTTGGAACAGCCCAGTTGGAAATCAGCTTGACCCAATTCAGAGAGAACCTGTGTGCTC Gene GeneID:614026|RANBP9:XM_002697582:445_cdna UTR3_Alt 2 NULL GeneID:614026 23 GENE RANBP9 NULL RAN binding protein 9 EMBV3_28783 AGGGCGTGGACCCGGCCCACAAGGAGGCCTATCTCTCAGACTCTGATTTCCAAGATATCT Gene GeneID:781105|VILL:XM_002696943:516_cdna Constitutive 0 NULL GeneID:781105 22 GENE VILL NULL villin-like EMBV3_34053 CTTCCTGACTCCGTTAGTCCAACACTTGTGAAACTCCGAGAAGTGCTGTGGTCTCAGCAA Gene GeneID:520488|PACSIN1:NM_001101101:134_cdna Constitutive 0 NULL GeneID:520488 23 GENE PACSIN1 NULL protein kinase C and casein kinase substrate in neurons 1 EMBV3_30514 TACTTGCCACCTCATACGTGTGCTCCTTGGCCACATCAAGGGCAATAGCCAACATGCCTA Gene BVT0102_108483 - 1 EMBV3_05742 GK000006.2:61357186-61362543 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205288 TCONS_00205272 TCONS_00205256 TCONS_00205285 TCONS_00205255 TCONS_00205268 TCONS_00205279 TCONS_00205273 TCONS_00205280 TCONS_00205265 TCONS_00205261 TCONS_00205266 TCONS_00205271 TCONS_00205282 TCONS_00205267 TCONS_00205287 TCONS_00205274 TCONS_00205284 TCONS_00205283 TCONS_00205270 TCONS_00205277 TCONS_00205269 TCONS_00205254 TCONS_00205278 TCONS_00205260 TCONS_00205264 TCONS_00205276 TCONS_00205281 TCONS_00205257 TCONS_00205263 TCONS_00205253 TCONS_00205275 TCONS_00205258 TCONS_00205286 TCONS_00205262 TCONS_00205259 1 XLOC_124617 Coding TCONS_00205267 XLOC_124617 Coding Coding APBB2 6:61359370-61707627 j TSS153333 6847 1 TCONS_00205267_6 757 0.0289177742076822 18 0.980390861894698 0.000960391102057574 0.000655563491708208 0.00130415842509569 0.000443403683168352 0.0012287628678411 0.00112705607389511 0.000541142778626678 0.000226632831673469 0.000613360583004105 0.00024091529598019 9.00061778315863e-05 4.2280426556727e-16 0.000203758301800921 0.000607840170625319 0.000389767656882182 0.000261004726056346 1.07639009720727e-14 5.26046037891695e-85 0.000886963689915547 0.000728635604778607 0.000186876080949036 0.000146091935922947 7.9872945108149e-05 2.14850879527921e-06 0.000479491535429866 0.000314560972709714 0.00036909550979924 5.48452778904008e-17 1.27952725876222e-42 0.000248912729054024 XM_005207864.1 APBB2 PREDICTED: Bos taurus amyloid beta (A4) precursor protein-binding, family B, member 2 (APBB2), transcript variant X9, mRNA. 0.0 1.164e+04 100.00 0.942456550314006 NM_004307.1 APBB2 Homo sapiens amyloid beta (A4) precursor protein-binding, family B, member 2 (APBB2), transcript variant 1, mRNA. 0.0 7164 83.53 0.985395063531474 TCONS_00205267_6 sp|Q92870|APBB2_HUMAN APBB2_HUMAN Amyloid beta A4 precursor protein-binding family B member 2; 0.0 1482 94.07 0.998678996036988 3 coding 0 0 0 0 -0.0180114133346195 0.900958424732234 0.0111261739362709 0.813993992562704 CTGGGCCCTGGAGTGCTTCTGCCTGCAGCTGCTCTGCAGCTCTTAGCAGTGGCTCTCCCAGTCTGTCACAGTTGGAGCTGCTGTGGGTGAGCTGCTGCCGTCTGTAGCCAAGCATGCTGTGGTTGGATCTGCCCAGCCGGGGAACAGAAATGTTTGCTGGATGGAAAATCCATAAAAGAAAGCTCCTGTGAAAGCCTGAGACAGACGATAACTTAAGCAAGATCAGATATATTTGGGCTGCCTGACCTCACTGAGTCATTGCTAGTAATTAACAGGACTTTGTGGGAAAAGGGAACTTGCCTTCTGAGCTTTGTACCAAAGACCTGGGAAAACTTAACCATCTCAGTCTTTCCTGAGTACTTGGAAACTGCCGGGGTCCCTGACAATGTGCTGACTGGTCGTCGCTATGGGCAGACGGTACCCAGAGGCTCACTGTCATCCAGGCAGCTCATATTTCAAATTATAACCTATTTCCTGCACCATTGCTGACGTCCAGAGACCCATGTCAGAAGTACTTCCAGCTGACTCAGGTGTAGACACTTTGGCAGTGTTTATGGCCAGCAGCGGAACCACGGACGTCACGAATCGGAACAGCCCAGTCACACCACCAAACACCCTCAATCTCCGGTCCTCCCACAATGAACTATTGAACGCCGAAATAAAACACACAGAAACCAAGAATAGCACACCCCCTAAATGCAGGAAAAAATATGCACTAACTAATATCCAGGCGGCCATGGGCCTCTCGGATCCAGCCGCACAGCCCCTGTTGGGAAATGGCTCTGCCAACATCAAGCTGGTGAAAAACGGGGAGAACCAGCTCCGGAAGGCCGCAGAACAAGGGCAGCAGGACCCCAACAGGAACGTCAGCCCCACCGCGGTCATCAACATCACTTCTGAGAAGTTAGAGGGTAAAGAGCCCCACCCTCGGGACTCCCCGGACTGTGAGATTTTACCCTCCCAGCCCCGGAGAACCAAGAGCTTCCTGAACTACTATGCAGACCTGGAGACCTCCACCAGGGATCTCGAGCAGAACGTGGGCAACCAGCTTGGGGCTGTGGGAGAGAAGGCCCAGCCAGGCCAGGCCTCCCCCACTGTCGGGAACGGTGATGTGCTGCTGCAGAAACCAAACAAGCCCCAGTCTAGCCCCGAGGAGGGCCACATAGCCACCGTATCATCCAGCCCAGAGACCAAGAAGGATCATCCTAAAACAGGGGCCAAAACCGATTGTGCACTCCACCGGATCCAGAACCTGGCACCAAGCGATGAGGAGTCCAGCTGGACCACTCTGTCCCAAGACAGCGCCTCCCCCAGCTCCCCCGACGAGACAGCAGATATATGGAGTGACCACTCCTTTCAGACTGATCCAGATTTGCCACCTGGCTGGAAGAGAATCAGCGACATCGCTGGGACCTATTACTGGCACATACCAACAGGGACGACTCAGTGGGAACGCCCTGTCTCCATCCCAGCAGATCTTCAGGGTTCTAGGAAAGGGTCCCTTAGTTCTGTAACGTCATCTCCCACCCCAGAGAATGAGAAACAGCCATGGAGTGATTTTGCTGTTCTGAATGGGGGAAAGATTAATAGTGACATTTGGAAGGATTTGCACGCGGCCACAGTCAACCCGGACCCCAGTTTAAAAGAGTTTGAAGGAGCCACCCTGCGCTATGCATCCTTGAAACTCAGAAATGCTCCACATGCCGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAAGCTAAGTGTTTCGCTGTGCGCTCTCTGGGGTGGGTGGAAATGGCAGAGGAGGACCTCGCTCCTGGCAAGAGTAGTGTTGCCGTCAACAACTGCATCAGGCAGCTTTCCTACTGCAAAAACGACATCCGAGATACAGTTGGCATTTGGGGAGAGGGGAAGGACATGTACCTGGTCCTGGAGAACGACACGCTGAGCCTGGTGGACCCCATGGACCGCAGCGTGCTCCACGCTCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGCGACAACGGCCGAGATTTTGCTTATGTAGCAAGGGACAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAAGCCATTGCCACAAGTCTCCACGAAATCTGTTCCAAGATTATGGCCGAACGGAAGAATGCCAAGGCCCTGGCCTGCAGCTCCTTACAGGAAAGGACCCACGGGAACCTCGACGTCCCCCTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTATTTGGGCATGCTACCAGTGGACAGACCGGTCGGAATGGATACCTTGAACAATGCCATAGAAAGTCTTATGACCTCCTCTAGCAAGGAGGAGTGGCCGTCAGTGAACATGAACGTGGCCGATGCTACTGTGACTGTCATCAGTGAGAAGAATGAAGAGGAGATCCTGGTGGAGTGTCGGGTGCGATTCCTGTCCTTCATGGGCGTCGGGAAGGACGTGCACACGTTTGCCTTCATCATGGATACTGGGAACCAGCACTTCGAGTGCCACGTTTTCTGGTGTGAGCCTAATGCCGGTAACGTGTCGGAGGCGGTGCAGGCTGCCTGCATGTTACGATACCAGAAGTGCTTGGTAGCCAGGCCACCTTCACAGAAAGTTCGACCGCCTCCCCCGCCAGCAGACTCGGTGACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAACGCCCTGTCACAGAAACACCATAGCTGCATATGCGAAAGGACTCTGTACCATTTACTGAAGGTTGAATAGCTACACTAAAGAAGAGGAGCTGATCTCTGGCCTTCCATTCAGTTGCTGATGCTTTGTCTTCAGAGAATTTATCCTTAACCAAACAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCGTGTGATATGAAAAGAAGCATGACTAATTTTTTTTGCTGTTGGTAAGTTACATCATGAGCAGTGGAAGGTCCCTTTCTTATTGTAAATATCGTAAACATTACGTAATTTCACACACACACACACACACACACACACACGGGGAAGAACGTGGCCACATCCCTCCCAGTGAAGATGCTGAATCCTTGGAGTGAATGACACCTGAGTTAGTTTCACTGTCTTCTTGACTGGATCTGTCACAAGCAACTTTTAAGTCCTACAGCACTTTGCTCTGTTTTCAGCATTGGATTAGACACTGCATACTGGATACCATTGAATTGCTATAAAAATTGGATGACGAATTTTTGTTTTAGTTTTTCATAAAATCGAACCTTTGGTTGACAAAACTGGCTGTTGGCATCAGAATAGAAACCAACTGGCAGCTTTCCTTGACGAGCTTCTTGACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATATTGGGGGGAAAAGTGAAGCTTCACAATTGAAAAGCTAAATTTCAGAAATTAAAATCGAACAAAATAGCCTTTCTGTTTAGGTGGTTTTCAAACTGATTAAGAAAAGAAAGAGATTTGCAAATCAGGATGCATTTGGGTGGGACATTATTTCAAACTTCTGCCTATATTGTACAATGCAGCTATAGAATTACAGTTCACTATGGCCATTCTCTACATAAACAACATTAAAACGAAATAGTCCTTGTAAGCCTTTCATCCTTAATTTGATAATTAGCCAATATGCAATTTGGAGTTGAGGAAATACCATTTTCTATTTTAGATCTCCACCACCATGTCATGTTGTAGTCCCCATTCTAGGTAAACGTTCTGCTAGGATTCTACATCTAGCTCAGTCTTACCCTAATGCTTTTTGCCCAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGCAACAAACTGCATTAAATTGAACCTTTCTGCATTTATGTGTTTAATATTAAAATTTGTTGAACTTTAGATATATTTTCAAATTTATATTTTTTCCATTTATCTTCAAGATTTAAGAATTTCTTATCAGAGCAAAATATACATAGGAACAATGTACTATTTAACAGGTTTCCCAAAAATAGCACTTTCCTCCTTCTTTATCAATAGACAAGAGACTTAGATGTAAAGATACACAGATTTAGACTCTTGTTGATACTGTTTAAAAGAAGTCACTAAGAAGCTAAATCTAAACATGTTTTGTTTACTCTTCAGTGATAAAAATGATCATTTTATAGCATCATCCAGTTATAAAAGCAATGCTTTATGTTTATCTACTGCTATGTACTTGTCAGAATGGTTTCCACATTTTTATCATCACATTTGAGCCTTATGAGGTAGAGAAGGTAATAAACACATTTGAGAAATAAAAAAATATGAATTACAGGGGCTCAACCACCTAGCCTAAGACCTCAGGAAAGTGAGTGAGAAAGCCAGGACTAAAACTCATCACACATCTCAACTCCCAGTTATTAAAGTTACGCTGCTTCCATGCAAGTCAGGAGGAGTCTTTTCAAACTTACTCTGAGCATATTCAGTTATTGTTGAGCAATCTTAAGATTCCCTGTATAAGCAGGGAAGTATGGCCAAATTACTTGTGCAGTAGAATTAAGTATAAAGCCAATGCCCTCTCTCAGTCCAGGACTGTTTTCCTGCATTGTGCCTCAGATGTGTTGTAAAGACAGGATTCTATGTGCAGCACAACCTGTTCAACCCACAGACTATCCAGAGATGATGTTACGTGTGGTACAAATATTCCTAATTCATGATACTTAGCCACCAGAGAACATGATGGAATGAGTAGGTGGCCTCCTGCCTCTGTTCCGTCTCAGAACTCTGGAGTTGTTTGCTAGCACCCTAGAGTTATGGCAAAAAAGATGCCACTCTAGAAATGAATTATACTTCTCACCAGCCTATATACTATTCTATGGAAGTTATCAATAACATCCTAAGAAATTACTTCATTAAAGAAATCCTTACTGTGCCCTTCAGAATTCAATCATGATGATTTTTCATCTTGACCTCCACAGTGAAACATTTTAGTGTGATAAACTTCAAAATTCTTAACTAGTGAGCCACTTTTATATTGGAAATCTCTACCAGAACCGCATTCATTTTTAAGGCATACGTTTGTTTTCAGGATCAAGAATACTGAGCTAGCTTTAAATAGCAAACTGATTTATATATGCAATTATAGGATGCATTAAGATGAATGATAGCCTTTACATACTGAAAACTTTACTGCAGATATTTTGTTTTAAAAATAGCTTTGCATAGTAAATGCAATTACTTTTGTAAAACTAATTATGTTAAGCCGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTGTGTGTGTATTTTCTGTGAAAGGATGCCAGTGTTTTACCTGATATTGTAGTGACACTTCAGTTATCTATGCATTCTTTGTATCTGTGATTCGGTAAACAGGCAGCCATGTTCACTATGCCTTGTATGTCTTATCATTTTTTTAATTAACCTGTTAAATACAGCTTAAAATATTTTTATTTTATTTATTCTATTTTTACTGAAATATACTGCATTATTGTGTTTAATGTATTATTATCTTTACTGGATATTATCTCTCAGTGTATCCAGGTCTAAGTAATCTCAGTGAACTATACATTGCCTCAAAGGTGGTTTTGTAATGATTTGTAGTCACATTTTTATTGGAATATGTAGAAGAAACGGCAAAATACTTACAAGTTTCTTTTTATTTTTTAAAAGCAGCTAGATAGACGCATACTTGCCACCTCATACGTGTGCTCCTTGGCCACATCAAGGGCAATAGCCAACATGCCTATGGCTAAAAACTTTACTTTGCAAACTTAAAGCACTGCTCGGTGCTTCATTTTTATATCCTTCACAACACGTGTGAACTCATCCAGAGACACACACATGTCCTCATGCCCTTTGTTTCCACCTGAATATATGATCAGCCATAGCTAATTGGGACCATTGTCTTTCGTTTATGTCTGTCTTACTGCATGAAGCAACACTAGACCCATTCTCATTAAAATAAGTTCTTGGTGATAAACTGTTGGCACTGCTACTTTTTAAAAAATGCCGCTTTTATGATTTTATGATGAACATTTGTACAAGTCGACACAAGGTCATTTACTAGAAGCCCTAAGTCTTTCCTCCTCTTCTTAGATGACACGCTCACTTCATAAGCATTGCAACACAAATTAAAGATTTCATTAACAATGTGAAAAACATTTCCCTAACTGATATTAGCACCACTTAACTAGTAAAAGCATTAGCTCTCTAGTTTGCCAGACTTCCTCTACCCAATACACAGCTAACATGTGTTACACAGCCTGTAAAATGAAGTTTAATTTATTTCAGCTTCAGAGAAAAGATACTGCACACATTTATCAGTGAGAGCACTCCCTGCCATCCAGAGCAGCTTGTTTATCCCAAAAGAACCTTTGGTTTTGCTTTTGGCCCCTTCTGCTGTTGACCACTTTTACACATTTTAAATGTAATATGTTGTGAGAATAAACTTAGCTGCGTAAAATGTTTGGCTCATTTATCTGACATCAGTTATACATATCCAGGCATAGCGATAAAAATCTCACGCCAGTCATTTTATTTTCAAATTATTCTTAAATTTAAAACCATTTTAGTAATGTAAGATTTTGCTTTGATTAGCTGTTGTATATTTCTACCTGGTAAGAACTAGAAAGTAACTTTAAATTTTGAATAACTCATCACACTGTCCTTATTTGTTACTCAGGAAGGACATCGGGCATTTTGGACTTGGAAGCCTAGTCACCAACTTGATGCTCGTGTATGCACTCTTTCTAGTATTAAGAGAGTCCATTTTTATTTTAAGACCCT EMBV3_15610 TACTCTGTAGGGGTGTGGGTTCATTCCCTGGACGGGGAGCTAAGATACCACAAGTCTCAT Gene BVT0102_175617 - 1 EMBV3_28824 GK000022.2:36738158-36876903 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05675 ATGTCTATGTGCTCATTGTCACAGAAGTGCTGGAAGACTGGGAAGACTCGGTCAGCATCG Gene GeneID:618855|NUDT3:NM_001082466:173_cdna UTR3_Alt 3 NULL GeneID:618855 23 GENE NUDT3 MGC148951 nudix (nucleoside diphosphate linked moiety X)-type motif 3 EMBV3_01356 AGGCCCCTGGAGGCGAGTTAATGGGTTATAAAAGGGTGGATTTTTTGTTGATCTCTTTGT Variant GeneID:540212|NAA20:XM_002692139:118_cdna 250^385 2 EMBV3_03858 GeneID:540212 13 GENE NAA20 NAT5 N(alpha)-acetyltransferase 20, NatB catalytic subunit EMBV3_07857 AAAACGTTGTGCCAGAAACTACCTCTGAAGGCTACACATTCCGAGTGCAGGACGGCTCCG Gene GeneID:513592|KPNA2:NM_001034449:87_cdna Constitutive 1 NULL GeneID:513592 19 GENE KPNA2 MGC127507 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) EMBV3_30914 CACCCAGTGTAGAGAGTGCATTGCCGGCTACAGCAAGGAGAGCGGCCAGTGTGAAGACAT Gene GeneID:515222|CRELD2:NM_001046191:40_cdna Constitutive 0 NULL GeneID:515222 5 GENE CRELD2 MGC137165 cysteine-rich with EGF-like domains 2 EMBV3_33279 TCCAAGTCAGGAGCAGGAAAAGGTAAATTGACTCGCAGCCTTGCTGTCTGTGAAGAGTCC Gene GeneID:618648|ARPP21:NM_001076950:232_cdna UTR3_Alt 2 NULL GeneID:618648 22 GENE ARPP21 ARPP-21 cyclic AMP-regulated phosphoprotein, 21 kDa EMBV3_36200 TACCGCCAAATGAACTGCTTCAGCCACCTCAGCCAGACCTACTGTGGCAGCTTTGCTTAT Gene GeneID:539477|TSSK4:XM_002690496:455_cdna Constitutive 0 NULL GeneID:539477 10 GENE TSSK4 NULL testis-specific serine kinase 4 EMBV3_25553 ACTCGAGGAACACATGGACAAAATAAACAGGTAATTAAAAAAATGTCTCCAACTTCACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35948 TCTGAACCAGGTTGTCCTTTGGGACAAGATTGTTCTGAGAGGTGATAATCCGAAGCTGCT Gene GeneID:767917|SPCS3:NM_001076993:50_cdna Constitutive 0 NULL GeneID:767917 5 GENE SPCS3 MGC127785 SPC22/23 signal peptidase complex subunit 3 homolog (S. cerevisiae) EMBV3_05946 GTTTCAAGAGTCAAGGATACACCGAAAACGAGAACGCTGTGAGCAGGACTTGAACCTGCG Gene GeneID:100300305|LOC100300305:XM_002697497:203_cdna Constitutive 0 NULL GeneID:100300305 23 GENE LOC100300305 NULL similar to eukaryotic translation elongation factor 1 alpha 1 EMBV3_28429 ACGGTTCTCGGCGACAGTGGCTAGAATCCCAATCCAGGACTACAAGGAAACAGTGGAATA Gene BVV0102_120603 + 0 NULL GK000023.2:25027198-25030302 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132780 1 XLOC_080868 Coding TCONS_00132780 XLOC_080868 NonCoding Coding - 23:25029637-25030138 - TSS99260 501 0.491017964071856 1 0 0.00168373880666342 0.00892453559307689 0.00579286472998265 0.00248765088271427 0.00106528822195641 0.000157608710264574 0.00075505818184511 0.000500682734532304 0.00275067583525199 9.03378006240921e-05 4.56922729700561e-06 0 4.58167641355134e-05 4.22408374837539e-05 0.000338775721765036 0.00548264836884367 0 4.70350494840867e-321 0.00435935818924967 0.00232475452313839 0.000289432868375034 0 0.000152349359542628 0.0029279549618501 0.000802100007760764 0.00147291271475878 0.000188930700050637 0 0.000116278025888536 0 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 2e-95 352 89.66 0.493013972055888 0 noncoding 0 0 0 0 -0.17570651684122 0.273292447898661 0.0121164833090691 0.825454043830813 GTTGCAGGGGGTCGGGGGCTAAGTTTTCTCTCCTGCTTTTTCCTGAGCGCCTCTTTTTCTCAGCCTCCAGAAAAAGGTGTTTTTGAGAAGCTTAGTAATTATGACAGCCTTACGATAGTGGAATTCCACTGTTTCCTTGTAGTCCTGGATTGGGATTCTAGCCACTGTCGCCGAGAACCGTGTAGCGACCATCCCGAGCACCCAATTCGATACCTTAGGACCGCTTGCCTGAGGGTCTTAATTCGAAGTTTGAGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCAATGGATGGAGGAGCCTGATGGGTTACAGTCCATGGGGTCGCTAAGAGTCGGACACGACTGAGCGACTTCACTTTCACGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTTGAGAATCCCAGGGACGGGCGAGCCTGGTGGGCTGCCGCCTATGGGGTCGCATACCGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCA TCONS_00134455 r 5' 0 TCONS_00134455 r 5' 0 EMBV3_25931 TTCCCACCCCTTGTCTCCTGGTTGCTTCATCTCTACCAGCCTGTGCCTTGTCTGAGTCCT Gene BVT0102_358160 + 0 NULL GK000008.2:67824443-67861050 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228031 1 XLOC_138392 Coding TCONS_00228031 XLOC_138392 Coding Coding LZTS1 8:67857968-67867782 = TSS170110 5045 1 TCONS_00228031_3 595 3 0.486191786405788 2.15749335772322e-05 2.98764835786311e-05 9.17144926265782e-06 0.000131681276383583 2.93588165950516e-06 1.41805790280258e-06 0.000125996723070715 1.87583238127998e-05 3.28429147866281e-05 5.79046604332861e-05 0.000167434889815505 2.12627344474475e-05 1.08060188803385e-05 0.000155712255693096 0.000127606615878481 0.00120409857370648 0.000174414565039721 0.00225793428042947 0 0 0 0.0029535536557043 0.000349140365033033 0.000799429190229533 6.18001812626399e-05 8.79811717898054e-05 0.000114976432435339 0.000104714414583117 0.00024537647302736 0.000371817862600932 NM_001192287.1 LZTS1 Bos taurus leucine zipper, putative tumor suppressor 1 (LZTS1), 0.0 3534 99.95 0.388899900891972 XM_005273394.1 LZTS1 PREDICTED: Homo sapiens leucine zipper, putative tumor suppressor 1 (LZTS1), transcript variant X1, mRNA. 0.0 2396 86.93 0.390089197224975 TCONS_00228031_3 sp|Q9Y250|LZTS1_HUMAN LZTS1_HUMAN Leucine zipper putative tumor suppressor 1; 0.0 1048 90.35 0.998319327731092 1 coding 0 0 0 0 0.0189376024047935 0.853116427642536 0.00482739364827232 0.929075491869833 AGGTCTCAGCTCTCCCAGGCTCTGTGAGGCTTCTGCTATGACTGCAGTCTCTTCTCGGAGCCAGGACTGCCCCTCGCCGCCCCTGCCACGCCAGGTCCCCACTCTGCCCCACCTGTCCTCGGCCCCCGTGTCGCCATGGGCAGCGTCAGCAGCCTCATCTCTGGCCACGGCTTCCACAGCAAGCACTGCCGGGCCTCGCAGTACAAGCTGCGCAAGTCTTCCCACCTCAAGAAGCTCAACCGCTATTCAGACGGGCTGCTGAGGTTCGGCTTCTCCCAAGACTCGGGACATGGCAAGTCCAGCTCCAAAATGGGCAAGAGCGAAGACTTCTTCTACATCAAGGTCAGCCAGAAGGCCCGGGGCTCCCACCGCCCTGATTACACGGCACTGTCCAGTGGGGACCTAGGGGGCCAGGCAGGAGTGGACTTTGACCCATCCACCCCACCGAAGCTCATGCCCTTCTCCAATCAGCTAGAGATGGGTTCTGAGAAGGGTGCTGTGAGACCCACGGCCTTCAAGCCGGTGCTGCCACGGTCAGGCGCCATCCTCCACTCATCCCCTGAGAGCGCCGGCCACCAGCTGCATCCTGCGCCTCTGGACAAGCCCAAGGAGCAGGAGCTGAAGCCCAGCCTGTGCTCCGGGGCACTGTCCGACTCCGGCCGGAACTCCATGTCCAGCCTGCCCACCCACAGTACCAGCAGCAGCTACCAGCTGGACCCGCTGGTCACTCCTGTGGGGCCCGCCAGCCGGTTTGGGGGCTCAGCCCACAACATCACACAGGGCATTGTCCTCCAAGACAGCAACATGATGAGCCTAAAGGCCCTGTCTTTCTCTGACGGGGGCAGCAAGCTGGCCCACGCAAGCAAAGACAAGGGCTCTGTGCGCTCCCCCATCTCCACGGACCAGTGCACCATCCAGGAGCTGGAGAAGCAGCTGCTGGAGAGGGAGGGCGAGCTGCAGAGGCTGCACCGCAGCTTCGAGGAGAAGGAGCTGGCCGCCAGCCAACCTTACGAGGAGCGGCCGCGGCGCTGCAAGGACGAGCTGGAGGGGCTGGAGGCCAAGGGCAAGATGAAGGTGGCCGCACAGAAGAGCCAGCGCGCTCAGCAGGTCCTGCATCTCCAGGTGCTCCAGCTTCAGCAGGAGAAACGGCAGCTCCGGCAGGAACTCGAGAGCCTCATGAAGGAGCAGGACCTGCTGGAGACCAAACTCAGGTCTTACGAGAAAGAGAAGACCAGCTTTGCCCCTGCACTGGAGGAGACGCAGTGGGAGGTGTGCCAGAAGTCCGGAGAGATCTCCCTCCTGAAGCAGCAGCTGAAGGAGTCCCAAACAGAGATCAACGCCAAGGCCAGCGAGATCCTCAACCTGAAGGCTCAGCTGAAGGACACGCGGGGCCGGCTGGAGAGTTTGGAGCTGAAGACGCAGGACTTGGAGAACGCGCTGCGCACCAAGGGCCTGGAGCTGGAGGTGTGCGAAAACGAGCTGCAGCGCAAGAAGAACGAGGCGGAGCTCCTGCGGGAGAAGGTGAACCTGCTGGAGCAGGAGCTGCTGGAGCTGCGGGCCCAGGCCGCCCTGCAGCGGAGCAGGGACGCGGCTGCCCTGGGTCCCGCCTCCGCGGACGACGTGCCCGCCCTTCAGCGCGAGCTGGAGAGGCTGCGCGCAGAGCTCAAGGAGGAGCGGCAGGGGCATGACCAGATGTCCTCTGGCTTCCAGCACGAGCGGCTGGTGTGGAAGGAGGAGAAGGAGAAAGTGATCCAGTACCAGAAGCAGCTGCAGCAGAGCTACCTGGCCATGTACCAACGGAACCAGCGCCTGGAGAAGGCACTGCAGCAGCTGGCCCGGGGGGACGGCGCAGGGGAGCCTTTTGAGATCGACCTTGAAGGGGCTGACATCCCCTACGAGGACATCATCGCCACCGAGATCTGAGGGGCCTCCTGGGAGAGGGCCGGGGACCTGGCATTGGGAGGCAGGGGTGCTGAGTCTGTCAATGGGGGCTCCCTTGCCCTGCTTCCCTGCTCAGGCCTCAGAGAGAAGTACAGACTTCAAGGCGAGGAGATTGGTTGCGGGGTGGGGGTGGGGAACGGTTGCTGCTACAGGGCCTCTCCTGGCCTTTCCCAAGATCCAGCGCTTAGCAACCCTGCAGCCGGCCAGACCTCCAGCTTTGCCAAGAGAGGAGTCCTGGGATCATCAAGATTTGGTTACTGGCTTCCTAAAACTTGGTCTTTGTTCAAAATGCTTAGAGATTTTGAACCCTCTAAGCATTTAGAGGGTTCCCTAAATGCTCTCCCAGAGAGGGTGGTGACTGATGGAAGCTCCCTTCCACCTCTTTTCCTACAACTTTTCTTGACTCCCACCCCCGCTCCCAACACACTGGGTTTGCCCCTTGGGAACAGAACACAAGCATTTATGACCAGAAGCTTTGGAATCTGACCTGGTCATACCTCATCTATTCCCACCAGCCATGGAGAGACAGGGGTTGGAGTGGGATGTGGAGAACTTGGCTGAACAGCAATCAGAGCTTCCCAACACTGTAGGTCTCAGAAAGGAGGGGAGAGCTGGGGCTACCCGGCGGATGTCGAGACTCAGCCAGACCAGAGGGTGTCTGAAGGAGAAGCTAGGTGGTGACAGCCAGACCCTCTAGCCCTGCTGACTGGACGTGAGCAGCCTCGGGATGACTGGTGGCCTTTGATCTCTTCTTAAAGCCATAGCCCCAAGGCCCTGGGATGGGTGCTGAGGAAGAAAGATGATGCAGGGAGTGTGTGACTCCAAGCTGTCCCCAGGGGAGCCCCCAGATCTTTTCATCATGAGACCAGAGATAGGGATTTCCCCTCCTGTTCAAGTTGCTCAGCATTGGTTTTGATTCCTAAGAACCAAGTCTTTGCTTGAACTCAGAATAACCTTTGTCCACTGAGATGGCACAGGGTCATCTGGGCTAGGCCTTCCCCCTTCACCTTCAGCTCCATCCTGCTGCCGGTCATGTCCCTTGTCACCTCCAGGGCTAAGTACAGACAGAGCCTTTACAGGTCAGGGAGGGGCCCCAAAGTGCCAGTGTCCAAAGACAGTAAGAGGCTCAAACACAGCCTCTGAACAGCCCTGGGGCCCCCGGCTGCACCCCCCTCTGCTTGCATTAGCCCCACCTGAGCCCCATAATCAAGGACTCCTGGCCTGCAGAAGGCTGGTTTTCCTTTTCAAAGATGTGCGGAGAAAAGATTGTTTCTCAGTTGCTTGGTTCAGGGAATTTTCTTCTTCTTTTCCCTTTCTTGTCTTTTCAGACACAAGCCAGATCTCGCAGGCAGCCAGGCTGTTCCATGTTCTATTTTTGCCTCGAGCTGCAGCTGCTGTTCCTGGGACAGCCAGCCCCGGCTGGATTCCTGGGCTCACGCCCGCATGCTGAGGGGGGTTAACTGAATGTCTGAGTATGCAGCAGCCCCAGGCCATTGCTCCCCAGTTCTGTCCCCGACTGTGGACCCCTCCAGGCCCCAGGTGGTAGTGGGGAGCTGCTTCTCCTCCAGCCTCCCATCCTGCCAGGGTCCCCCCACAGTCCCTCCTTGAGCCTGGACTGAGAGCAGGGCCGCCTTCCCGGATGCTGGCTCTGCCTTCCATTCCCCAAGCTAGGCTGTGCCTGTCCTGCCTTCACGTGACAGAGGAGCCTCTCTGGAATTTCAAGCCATTACTCTTAGTCATAGGCTAGACTTAAACCCGGAATCCACAGGCCCAGAGCTCCCTCTCTGCCTGGAGGCCAGTCCCCTCCACAGGACACAGGCAGATCACCCCCACTCCCCAAGTCAAAGACTTCCCACCCCTTGTCTCCTGGTTGCTTCATCTCTACCAGCCTGTGCCTTGTCTGAGTCCTTTCCTCCCAGAGGCTGTCCTGATGGATAGAAAGAGGCTGCTGCCCCCTCCTCGGGCTGGAGACCACCCCCCCAAAGGGCAGCCAAAAGCCCATTGCTCTGCCCTCAAGACCTCGCTGCAAAGAGGTGGGTGCTAAGCCCCAGGGGAGGGCGCTCAGGGGCACAGCAGCTCCACCTCAGTGTGATAGTGCCCTGCACCCCTGTCCCCATCTCTGCCCCAGGCCAACCCATGGAGCCCTCCCTGGGTTGCCACCAGCCCAAGGCTCCAGGGTGGCCCAGTTGCACCAGAATGAGAGTGTCCTATAACATAGCGACCTCGCCGCGGTGTGGTTTCCCTTCCCTTCGCTGTGCTAAAACCTCCATGCTATTCCTGGACCTTGCCAGACCCAGCCTCTCTCCGGAAGGAGCCTCTGAGCAGCAGAGGCTGAGCAGGACTGGAGAAGTCGGCCACGCAGGCCTCGGAACAGGCGGCCTGGCCCAGGGCCAGCGGGAGCTCGCCGCCTCTTCCCCCGAGAGTGGCTGCTAAGACGCATGCTCGCTGGATCAGAGCTGCGGCTCTGCTAGCCAAAGGATGGTGAAGCTCTCTGCTGTGAGCAAGGAGGCAGCCACACCGAGGGGGGCTCTGCCTCTGGGCTTTAGAGTGACCAGACTCTCATGTGGCGCCCACCCTGGATTTATCCTCTGGTCTCTGCATTTGGATTAACCCCTGCTGGGCACAGTCGGTCCCCATGAATACCGAGTTCCATGGGGACTGCGTTGGGGGGTACCTCTCCCCTGAGAAGCACCCACCGAGCCTCTGCCCCTGCTCGACTCCCGGCCTAGCCTGGGCCACTTCTTGGGAGAGAGATCCTAGGGGTCAGGCAGGCTGGGTGGTCAGAGCTGCAGCTGTCCCTGCCAGGAGGACACGCACCTGTGTATGCACCTGTGTGCTTTCATGCTCCGCCTTCCTCATTTATCTGTGCTCCCCCTTGCGCTTCCTCTGCAGGCTAAGCGGGAACTCCGGCCCAGGCTGGCTATGGATGGACTAGCATTTGGAAGACTATGTACAGAGTTATTTTTCTCTTGGTTGTGTCTTGTTTGGTTTGCTCTGCTTTTGACAGCTTTGATTTATTTTTGATGCCCCCTTTTGGCCATGTAAACTATTTCTGGTAATTTTATGTTTTTATTTATGAATAAAGAATGCCATTTCTCATGCCC EMBV3_08087 GATAACCAGTCTCCTCTCTCCTGTGACCTGATACATCCTGAAGGCAAAAGACATCTCTGT Gene BVV0101_024842 - 1 EMBV3_39684 GK000007.2:41354611-41402839 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07366 AGTTATGGCCTTGGAGGCTATGGAGGTTATGGCTGTGGCTACTTCCGTCCCTCTTCCTAT Gene GeneID:100296833|LOC100296833:XM_002684628:130_cdna Constitutive 0 NULL GeneID:100296833 1 GENE LOC100296833 NULL hypothetical protein LOC100296833 EMBV3_27902 CTGCCTCCCTCATCCCCAGACTCCCAGACCAGGTCCTTGGAGTCTCGAGGCTGAAACCAC Variant GeneID:616283|LIN7B:NM_001046577:385_cdna 682^959 4 EMBV3_28775 GeneID:616283 18 GENE LIN7B MGC137426 lin-7 homolog B (C. elegans) EMBV3_09477 ATGATCCTGAAGAAGACAGTTTGAATCTAGTGGGTCCCATATCCGTGTCCTTTAGCCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39961 TCAGGCTCTGTCACACGACGATTCCCACTTCCACGAGCGGCACAAGTGTATCAACTTCTT Gene GeneID:783970|EXTL3:NM_001082473:67_cdna Constitutive 0 NULL GeneID:783970 8 GENE EXTL3 MGC155111 exostoses (multiple)-like 3 EMBV3_36294 GTGTAACATTTTGTATATTCTGGAGGTAGGGCAGCACCCCCGTATCTCAGCAGAGGTTGG Gene GeneID:508805|GOLGA2:XM_002691631:319_cdna Constitutive 1 NULL GeneID:508805 11 GENE GOLGA2 NULL golgi autoantigen, golgin subfamily a, 2 EMBV3_36909 ACAGGTGAGTGGTTCACCTTTCCTACCCCACCCTCATTCTATGCACCACACTCTCCTCCC Gene BVV0101_013104 + 0 NULL GK000007.2:40297055-40310285 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37757 TACCCATATCCGCAGCAGGTCTCCAAGGTGAACAGCCTCTGGCATGTTGGAACAATGTAG Gene GeneID:100336997|LOC100336997:XM_002685421:9_cdna Constitutive 3 NULL GeneID:100336997 2 GENE LOC100336997 NULL hypothetical protein LOC100336997 EMBV3_39784 TCTTTGCTTGCTGGATTAGATCCTTCCAAGGAGCTGAAAGAGAAGATGGACGAGCTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42717 CCGCTGGCTCACTTCCGGCCTGATATGTTGTCTGGACTTGAGTTCCGGCTCTTTCTTTAA Gene GeneID:613919|GGT6:NM_001105434:174_cdna Constitutive 1 NULL GeneID:613919 19 GENE GGT6 MGC151749 gamma-glutamyltransferase 6 EMBV3_27276 AAGAAAACTTCATTATAAAGAATTTCGAAGAACATTAGTTTGGAAGAGTTCAAGTCATTT Variant GeneID:512525|EFHA1:NM_001083416:40_cdna 759^930 2 EMBV3_42564 GeneID:512525 12 GENE EFHA1 MGC142737 EF-hand domain family, member A1 EMBV3_26197 CAGCTGACTCAAGGCATCTTCACCAAAGTCATCCAGGAGATTGCCCGGGTAGAGAATTCA Gene GeneID:353300|RHEBL1:NM_181668:20_cdna Constitutive 2 NULL GeneID:353300 5 GENE RHEBL1 NULL Ras homolog enriched in brain like 1 EMBV3_02455 GCGGAATCAAGACTGCAGGAAACTCTACAGGACAAACAACTTAGTACCTTCAGTGAATGG Gene GeneID:616931|NUDT10:NM_001035488:114_cdna Constitutive 0 NULL GeneID:616931 X GENE NUDT10 NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 10 EMBV3_33589 AGGGCATTTCATTGGATGGGTCCATGCCCTCTATCATTATAAGCCTAGGGTCTTGAGTTG Gene BVT0102_344079 + 1 EMBV3_22414 GK000017.2:64413469-64419025 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077764 TCONS_00077763 1 XLOC_047139 Coding TCONS_00077763 XLOC_047139 Coding Coding ERP29 17:64416482-64426516 = TSS58027 3791 1 TCONS_00077763_2 258 3 0.622445928436161 1.66199948789355e-05 7.25150415567256e-09 0.00017317045402119 7.20103731095129e-05 1.24604108032783e-05 2.10146147046768e-06 1.81198103455961e-05 1.81085206731851e-10 5.83458615114427e-06 8.2114779889036e-07 1.74576752820357e-06 2.92783846709023e-06 3.70197403751501e-05 3.65045157071471e-06 4.56433805241374e-06 0.000820984285711634 0.000262711707090099 0.000535907075385774 1.25625930418196e-05 0.000265988873706388 3.66948737598261e-06 0.00112966555913524 0.00103381177361855 0.000330110771059103 4.16337798545373e-06 7.28625201412255e-05 1.25932801447768e-05 7.46117284852618e-06 1.42435333414221e-05 2.41287994629883e-05 NM_001076271.1 ERP29 Bos taurus endoplasmic reticulum protein 29 (ERP29), mRNA. 0.0 2228 100.00 0.325507781587972 NM_006817.3 ERP29 Homo sapiens endoplasmic reticulum protein 29 (ERP29), transcript 0.0 1350 81.91 0.354260089686099 TCONS_00077763_2 sp|P81623|ERP29_BOVIN ERP29_BOVIN Endoplasmic reticulum resident protein 29; 0.0 523 100.00 0.996124031007752 2 coding 0 0 0 0 0.0334796494668183 0.851691911186046 0.0382613891461652 0.513472807493774 CCGCCCCTCACGTGGCTCCTCCCTCTCAGCCTAGGCCGGCGTGTGCTTGGTGGGCTGTACACGTGCGCGCACCCGAGCCTGGCCGCCTAAACTTCGTGGTCCCTGGGTCAGCGTTTTCTCCACTACAGCCTTCCCAGCACCTACTGCCAGAATCCGGCGTTATGGCTGCCGCCATTCCCCGCGCCGCTTCTCTCTCCCCATTATTTCCCCTTCTGTTCCTCCTCTCCGCGCCGCAAGACAGCAGTGGCCTGCACACCAAGGGCGCCCTTCCCCTGGATACAATCACTTTCTACAAGGTCATTCCCAAAAGCAAGTTCGTCCTGGTGAAGTTTGACACCCAGTACCCCTATGGTGAGAAGCAGGATGAGTTCAAGCGTCTGGCTGAAAACTCAGCTTCCAGTGATGATCTCCTGGTGGCAGAGGTGGGGATCTCAGATTATGGCGACAAGCTGAATATGGAGCTGAGTGAGAAATACAAGCTGGACAAAGAGAACTACCCAATCTTCTATCTCTTCCAGGATGGGGACTTTGAGAACCCAGTCCTGTATAGTGGGGCAGTTAAGGTTGGAGCCATCCAGCGCTGGCTAAAGGGACATGGGATCTACCTAGGTATGCCTGGTTGCCTGCCTGCATATGACACCCTTGCTGGGGAGTTCATCAGGGCCTCTGGTGTGGAGGCCCGCCAGTCCCTCTTGAAGCAGGGGCAGGACAACCTTGCGAGTGTGAAGGAGACTGACAAGAAGTGGGCCGAGCAATACCTTAAGATCATGGGAAAGATCTTGGACCAAGGTGAGGATTTCCCAGCATCGGAGATGACCAGGATCACCAAGCTGATTGAGAAGAACAAGATGAGTGATGGGAAGAAGGAAGAACTCCAGAAGAGCTTAAACATTTTGACTGCCTTCCAGAAGAAGGGGGGTGAGAAGGAGGAGCTGTGAGAAGGCACTCCAGGGTTTGGTGGGGTGGGGAGGGGTAAGTTACCTTCTGGCTGTGAAACTCTCCTGGGATATAACGGAATTTTAGGAAAAGTGGCATGAAACCAGAAATCTGAGCATGCGTGGATACTGACGCTGACGTGACTATGCTTGGAACATCTCTGTAGCCGGTCGCGGACAGCTGGTGAACACTTAGATGGCTTTTGAAATTCCCCCTCAGAAGGAATTGGTGCTATAAAGAGGAGTATACTGCCCAGGTTCTTGAAAGGTATGATTCTGATCCCAATTAAAGTTTCTGTGTTTTCGTTAAGTAGACCTGTAGCCATTCAGTTTTCTTTTACAAATTATACTTTGGCCTGTGGCCTACTTTTTCCTTGAAACTTATTTTTTTTAAAGCTAAGGTGGTGTGGAATCTGCTCTACCAGGGTAACAGACTATCCTGGTAACTCTGTGGAAACTAGGCTGAGCTCAAGACCTACCTTTAATTTCCTTTCCACAGGTGTTCAGATTCAGGTGGACTGATTGCAGCTGATTGAATGCATTGTCCGTTTTCTGGTCCTTGAAGTTGAATAGCAGTAAATTCTTTCCCATGCTCCGTGAGATACATATAACAGATTCTTAGTTTTACCAATATAACCTGGTAGGTTTCTTTAAGAGTTGCATTTAGACAGCTAAATGATATAACTCAGTTCAATTTGAAAGTTTCTTTAGAAAGGGATTGTTTTCCATCTAAATCACCTTGTCGCTGTTGATTACTCAGTAACCACCAGCTTTTTAATAAGCAGAGTGGGAGAGCACTGTACTGACTTTCAAATCTCTTCTCACACTTCCATACTTAACTATTTGAAAATATCAAATGGCAGCTTATAAAATGTCTAACTGTACCCACACAAAGAAATTTAAGTTGAGCAGTGTTGGCAAGTAAAACTTTCAATTCTTTGTTCCTCCATTTCAGCCAGATTGGGTATTTAAAATCACTGGAAACAAAAAATACAGCAAAACTCATGTGTTTAATTGGATGGCACAACAACAACAAAAATCCCACAGCTTAGGCTAACAATTCAAACCAACTAGATAAAAAATGTTTAAGCCTAAACACCTGCCCATAGCCAGCATGGATACTCTCAATATTTGACAAAAGAAGAACTATTTAGATATTAGGCCCAATAATTTCAATATATCCCCTACTCATCATTTCAGTTCTAACTGAAAAATCTGGAAGATCTTTTTCCATGCTTCTCACTGGTAAACTTGTTGAGCTGTTCTAATTTTTTCTCATCTACCTTAAAACAGTCATTTCCAAAGAATGAAGTATTCATTGTCTTATAGAAATTAGAGTAAGACAAATGACAGGTAGAGAAAGGACTCTAAAACTAAATTCAGTCCTTGAACGTGGTCCCATTTCTCAACTGTAAGGGGAAAGATAGAAAAGTGGCAACCCACCCAAGGGCATTTCATTGGATGGGTCCATGCCCTCTATCATTATAAGCCTAGGGTCTTGAGTTGAAGAAATGAGGGCTGTTGGATAGGACTGGATTGTCATACATCAAAGACTCTTTGCATAAATATTTTTCATTAAAGGTAGGCTGTGTTTCTCATTTAGAATCTGCAGTGATTTGTATATGCCACACAAAAATCTTCCCTAACATGTCCAATGGATTCCTTCCCTCTACTTCTTAGCATATAATTACTAATATTCTGTGGCTCAGATGCTACTAACTAGACTGTAATAAAGGCTATGGCTTCCTACCATCAAATGCTACACAATTTTTAAGGGAATTTCCAGATAAACTGAAGCACAATGAGCCCCTGGAGCCAACATGAGTCCTGTTCTAAAGAACCTGCAAGTTATCTCAAATAGTGCCAAGGGTAATTTTACTAATAGTCCTTGGTAATTGGTGGTATACACACACACACGAGGCATTAGAATTGCTTTAAGAAAGAATGGTTCTTCAATAGAGAACTAAGATAGAATCAAGATGAAGAATGTGAGGTGGGGTGGACACTCTGATTTTTAGCTCATTTCATCAATGCTTAAGAGTTTGAATCTTACCCATCCCTTACCTTACTGCCTGGCCTTAGTAGCCTTATCGGCAATAACTGCTTTTCTCACCCGTAAACAGTACATTATCTGGGACCCACTTTTACTAGGTATGTGGAAGCTGAGGTTGCAAAAAACCTGTACACTCAAGCATAAACACGGGTACTCCACAAATAATTTTTATAAGCATTTGGCTCATGGTTGCTTACCCTCCGCTTGTTACTATGGAATAACATGCCTGCATCGAGGCGGTGACAGCATCTCAAAAACAGGGAACGTGAAAAAAAATATAAACCTGAGTCCACCTTTTGAGGAACTCAAAAATGGCAGTGAGAAACAGCCAAGTGCCCATTTTTTTGTTAAAGGGGAAAAAAAGAAATGTTGAGGTGGCATTAATTCATACCTGAAGAAGCAAAAACTGACTTTTCCAGGGCTCAGTTAAGGGCATTTAATATCACAGGACAGAAAGGAAACTAGGAAGAAAAACAGCTCTTCCCACTGTGTTGCATGTATGAATAAACGTTTGATCTCAGCCTGTATGTTCATACACTCTTGGATAAAAAAACCATGTCATCAGCCTGCCTGAAATCCTCCAGTAACTTCCCACTAAATTTAGAAATCTCATTCCTTCCCCAGGCTACAGTTTCCTGATTGCTCTAATCCCCACTCCACCTTCTATCTCAGTCTGTACCCCTCTTCCACTCCGGTAAGTCCCAGGCACTTGAACCATTTTTCCCAGTCACTGGAACATGCCTTTCCCAAGGCTGATGCTTCATCATTCAGGTCAGATGGCGCCACCTGAGAGGTCCTCTGGT EMBV3_03505 AGAACAGCTCAGCAACAAGAAGATCAGGAGCATGAGGAGGAAGAGGATGATCAGGCAGTC Gene GeneID:100296883|LOC100296883:XM_002700030:125_cdna Constitutive 0 NULL GeneID:100296883 X GENE LOC100296883 NULL similar to immunoglobulin binding protein 1 EMBV3_12575 GAGAATGTAGGGTTTGTGATGGCCAGGAAGGGCCGTGTTTTAGGCTCTGGCTGTTGTCTT Gene BVT0102_248695 + 0 NULL GK000019.2:54024939-54035258 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094500 TCONS_00094501 TCONS_00094502 1 XLOC_057466 Coding TCONS_00094501 XLOC_057466 Coding Coding CANT1 19:54020559-54026223 = TSS70669 3145 1 TCONS_00094501_2 401 0.0213036565977742 3 0.445170404379304 0.00133315107564357 0.000536740213286825 0.000785092981800345 0.00054919063981023 0.000505479422194079 0.000244537010457142 0.0007202824564016 0.000809365152476021 0.000760182488205034 0.000329932796188212 1.07299334516343e-05 7.38149973680262e-06 4.56086573975161e-05 0.000501050358168757 3.966698136796e-05 0.0021508509585789 0.000987117041193654 0.00331082306316086 0.00128702648823845 0.000290603263639116 0.000674546254222813 0.000533688839352327 2.14996048439848e-09 0.000675123116787517 0.00161056659617828 0.000290410137796188 0.000521540657017652 0.000213760038065976 0.000190623085302559 0.000644223175204621 XM_002696154.3 CANT1 PREDICTED: Bos taurus calcium activated nucleotidase 1 (CANT1), 0.0 5672 100.00 0.999682034976153 NM_138793.3 CANT1 Homo sapiens calcium activated nucleotidase 1 (CANT1), transcript 0.0 1449 86.80 0.382511923688394 TCONS_00094501_2 sp|Q8WVQ1|CANT1_HUMAN CANT1_HUMAN Soluble calcium-activated nucleotidase 1; 0.0 726 88.03 0.997506234413965 1 coding 0 0 1 1 -1.43471864544642 0.0166802900799991 0.0344536716317551 0.519652178976801 ATGCCCGTCCAGCTCTCCAACCCCCCGGAATGGAATGAGTCTATGCACTCTCTCCGGATCAGCGTGGGGGGCCTTCCCGTGCTGGCGTCCATGACCAAGGCCGCGGACCCCCGCTTCCGCCCCCGCTGGAAGGTGATCCTGCCATCCTTCGTGGGCGCCGCTGTCCTCTGGCTGCTCTACACCCACCGCCCCCCTCCTGGCCGGCCCCCCCTGCCCAACACCCACAACTGGAAGCTTGTCCAGCCACCTGCTGCCCGGTACAATGACACCTACCCACTGTCTGCCCCCCAGAGGACGCCAGGCGGGACGCGATACCGGATCGCTGTTATTGCTGACCTGGACACAAAGTCCAGGGCCCAGGAGGAGAACACCTGGGTCAGTTACCTGAAGAAGGGTCATCTGACCCTGTCAGACAGCGGGGACCGGGTGGCCGTGGAGTGGGACCAAGGCCATGAGGTCTTGGAGTCCCACCTGGCAGAAAAGGGGCGGGGCATGGAACTGTCGGATCTGATCGTCTTCAACGGGAAGCTCTACTCCGTGGACGACCGCACAGGCGTGGTCTACCAGATCGAAGGCTCCAGGGCCGTGCCCTGGGTCATCCTGTCCGACGGCGACGGCAGCGTGGGGAAAGGCTTCAAAGCTGAGTGGCTGGCCGTGAAGGATGAGCATCTGTATGTGGGCGGCCTGGGCAAGGAGTGGACCACTGCCACGGGGGAGGTGCTGAATGAGAACCCAGAGTGGGTGAAGGTGGTGGGCTGCAGAGGCAGCGTGGGCCACGAGAACTGGGTGTCCAGCTACAACGCCCTGCGGGCCGCTGCCGGGATCCGGCCGCCAGGCTACCTCATCCACGAGTCTGCCTGCTGGAGCGACACGCTGCAGCGCTGGTTCTTCCTGCCGCGCCGCGCCAGCCACGAGCGCTACAGCGAGAAGGACGACGAGCGCCGGGGCACCAACCTGCTGCTGAGCGCCACCCAGGACTTCGGGGACATAACCGTCCAGCACGTGGGGGCAGTGGTCCCCACCCACGGCTTCTCCTCCTTCAAGTTCATCCCCAACACCGACGACCAGATCATTGTGGCCCTCAAGTCTGAGGAGGACAGCGGCCAGATTGCCACCTACATCATGGCCTTCACGCTGGACGGACGCTTCCTCCTGCCCGAGACCAAGATCGGGAGTGTGAAGTACGAGGGCATAGAGTTCATTTGAACCAAGAGAAGTCAAGATGACAAGCCAGGCCGAGGGGTGGACAGTTTTAAGCTACGTCAGGACTCAAGTTTCATAAAAACCCAACGACTGCACTTTGACGTGATGTTTAGTTGATCCTTTGTTCTTGTTTTGATTTTTTTTTTTTTTGGAACTCTTGAGGTGCGTGCCTGGTTTAGAAATTTCCAGAACTGGGAGCTCAGTCCCAGCCTGAGATGTGGCTTCTCAGAGGGGAACAGAAGTGGCGGGGTGGGGGTGTCTCCCAGAGCTGCAGGCCGGACATTTCCCTGCGCCTCCACCTGGTGGTGGAAGCTAGTCATTGCAGGCATCTTAATTTGGGGCCCATCCTCCGATTCAGCCCTTTCTTCCATCTGACCTCCTTTACTTTTCTCTCCATTTCTTCTCCTGCTCAATAAATATTTCTTGAGCTCCTACTGTGTGTCAAGAACTGTGCCCTCTCTGGGAACCCAACAGTGAGTCTGCCAAGTGGGGCTGCCAGCCTGGTGCTCCTGGACCACCCGTCTTCTCTTCCTTGTGAACCTCAGGCATTAAATCCACCCCTCCAGGCCCCTGGAAAAGAACCTATTTACACTGCAGGACCTCACAGGGCTGTGAGGGCAAGGGCAGGCCTCCGGGAACACGTCTGCTCAAAGTGCCCCAAGAGGGGTCACAGGCCCACCATCTGCCCCACGTCAAACTTCTCCATTCAAGGGTCTGGCCCCGTATATTCTGTCTTCAGGAAAATTCTGTGCCTGCGTAGCACTTTGAAGTTTTAATTATTAGCTTATATATTAATTAGTTTCCTTTCTTATAAAATGGAATCGGCTAATCTTATCAAGAGCAAAGTCCTGTAGTTAAGAAATTCATTCCCGGCAGTGAAGAAAATGGTAATTAAGCAGTTACAGTCCATAAGGCAAGTTTTCAAGCACTTCTAAGTCCTTGGCCAAAGGATACAGTGATAAGGACACAATACCTTTTTCTAGCAATTATCAGAAATTGCCATTTCTTTAAAGACTTCCACGAATGACTTGAATGTGTAATTCCTGAGTCAAAGAGGGGCCCCAGGCTCTGGCAAGCCTGCACCTGGCCCCCGACGCTGGGCTCCCTTACCCTGGGACTTGTGGATGAGGCCTACCTGGTCCGGCAATTTCTGTCCTGGCCTTTTATTTCTCCGCTTCCCTGTTAGAGTTTTGCAGCCTCTTCTTTATAAAAACTTCACAGAAACTTTGGCACGTCTTAGTCCCTGTGGTCTCTTCTCCGTACCCCAGGGTAAAGGTGGAGGGTTTGGGACACAGGTCAGCCAGAACCGAAGTCTAGAAGGGCCATCACCATCAGCCCACGGCACCCCTCTCCCAGAAGCTACCTCACCTCTCAGGAGAATGTAGGGTTTGTGATGGCCAGGAAGGGCCGTGTTTTAGGCTCTGGCTGTTGTCTTGTGAACCTCTGTCTTGTAGACTTTTCCCACTTTGGAATTTTAATACAAATGCTCGGAGGGGACCCAGGAAGGATCCCTCGTTCCTGCGCGGTTGTTTCTTCCACTATAACACTAACAGCAGGAGAGTAGAAAACAAGGTTTGGAACAGACATGTCTCTCTAGAGCTCAGCTCCCACTGTACACAGTCTGAAGGCCCAAGTCTTCTCTGACTTGGCTTACCTGGGCTCCCTGACCCACCTCCTTGATAAATATCCACGACATTCAGGGCCGTGTGATATTAAAAATACCAGAGATGAAATTAGGAAGGTTGGAGGACTAGGGACATTCTCTGGGTTGAGGTCTAAGCCCCAGGTGCCCAGAAGCTCCATTTTCACACAGTGATTTTCAAGTATTTTAAAGCTAGACTTTCCCCCACCCCCACCCCTATTCGCTGCTGTAAGCATAATGATTGTGTTCCCTTCCTACTGGAGCCATTGTTTTGTAAACAATAAAGTGAATTCTCTTTGT EMBV3_36521 GGGGACCGCTGTTGAGTGCCTGCTGTTTGCGGCTTAGAAACCAGAGAGACACTGATAAAA Gene GeneID:517045|ARVCF:NM_001105380:55_cdna Constitutive 0 NULL GeneID:517045 17 GENE ARVCF MGC155194 armadillo repeat gene deletes in velocardiofacial syndrome EMBV3_28898 TTCGGGGTTCTGCCACTCCCTGAGGCCGGGGGCCAGAAAGGGGAGCCCGGGTACCTTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40708 ACAAAACACGAAGAGAGAACTTGCAGCTGGAGCCTTTGGAACTAAGAAAACAAATGCGAG Gene GeneID:539633|HLTF:XM_002685027:203_cdna Constitutive 0 NULL GeneID:539633 1 GENE HLTF NULL helicase-like transcription factor EMBV3_17319 TCGCAATGTCTGGATCCGCCTGGATGGTCCTGGAGTGACGAAACCCTTGAGGAAGATGTT Gene GeneID:617881|F13A1:NM_001167894:14_cdna UTR3_Alt 2 NULL GeneID:617881 23 GENE F13A1 NULL coagulation factor XIII, A1 polypeptide EMBV3_34318 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33521 CCTGAGAGTTGGCCTGGTTGGGAGTGGAAGGCATAGAAGGCTGCAGTTAGGAAGGTTAAT Gene BVT0101_015704 + 0 NULL GK000030.2:93977810-94042283 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245163 TCONS_00245164 TCONS_00245161 TCONS_00245162 1 XLOC_150638 Coding TCONS_00245162 XLOC_150638 Coding Coding BMP15 X:93968650-93981832 j TSS184087 6499 1 TCONS_00245162_3 377 0.240652408062779 4 0.507245277293073 0.0456543313159096 0.0243450342317255 0.0381146567592418 0.0227664759732739 0.0250708168840818 0 0.020993336344471 0.0163667971801061 0.0305531416380153 0.00584913639894331 0.00134735768893666 0.00145566853054033 0.00837059622204432 0.012098506197737 0.00710469327190838 0.000273767254891614 4.00052528013783e-28 1.06829337395944e-05 0.0122146303784189 0.0165144369136954 0.00606935595209518 5.40378315580368e-05 0.000298205717228926 4.0599274037496e-27 0.0129085680401713 0.00982842646115049 0.00926257821511904 0.000441638658205803 0.000377477109230645 0.000679030827091005 NM_001031752.1 BMP15 Bos taurus bone morphogenetic protein 15 (BMP15), mRNA. 0.0 1361 100.00 0.115863979073704 NM_005448.2 BMP15 Homo sapiens bone morphogenetic protein 15 (BMP15), mRNA. 0.0 798 83.01 0.118479766117864 TCONS_00245162_3 sp|Q6PX77|BMP15_BOVIN BMP15_BOVIN Bone morphogenetic protein 15; 0.0 725 93.19 0.941644562334218 1 coding 1 1 1 1 -1.21963426240756 0.0018189747361331 -1.05358185539195 0.00152103756862168 GTTAGGAGGCAGAGAAGGGGTAAGAAAGAAGGGAGAAGTGGTGTGGACATGGAAGACAGAGAAACTTCTGGGCTGCCTCTCCACAGCTCATAACAGGTCATTTCAAGGTGAGGAGACTGAGGCTCAGGGAAATGAAGAGATTTGCTTTGGAGAGCTTAAATGACTGCTAATAAGAAACAGTATCAATAACAATCCAAACACAGGTCCGTTGCTTACAAAGTCCGTACCTGTTCCAAAGAGCCATGTCTTGACCTAATGTCCCACCTTCTTAGAGATCCAGGAAACTGCTTCTTCTTGGACAGGGCCAGGACTACACCTACCATTTTTCTGCAGAATCCTGGTCTGGGGTAGCCTTAACTAACTGGTTCAGCCCTGATGCCTCCAGTAACCAGCCAAGCTAGGTTAGCTCCTAACCAACTTTCATAGATTCAGCTCCCACTGCCCTGTGCTTCTCTGATGAAACCCACACAAAATCTCAACACCTTCCATGGAAAAACCAGAAAATTCTAAGTCAGAGTTCTCAAACTTGGCTGCACATTAAAATCACCTGCAGAACTTTAAGAACTCCTGATGCCCTGGTAATACCCCATACTGACTCCATCAGAATCTCTAGGGATGGTACGCAGGCATCCATAATAGTTAAAACTCCCCACGTGATCCCAGTATAGAGTCAAGATTGAAAACCACTGTTCGGGCATCTTCTTCAAGCTCCAGCAGCCATACTCACAGAGAGGTTCCCACGTTTTAGTACTCATACGAACATCTTGGAGGACTTAAGATTCAGATTTCTGGCACTTACGCTCAGAAAGTCCATGTTTTTGTCTGGACCCAGAAGCCCAAATTCTTAACAATCCCCTCAAATAGCTCCACTGCAAGTCCTTAGCAGACCACATTTTGGGAAATGCCACATTAGGAAAAGCATTGCATGGAAGCGGGGTGGGAACAGGAGGCCTCTGGTCCTTTAAGGACTGATTAAGAGACTACCTTTAAAGCTGTGAAGCAGAGCAGGCTAGGGCTGCTTCTTTTCATCCTAGTGGATAAGGTAAGGGAGCAGGTCCTGGAATGGGCCTCTCCTTTTAAATACGATCTTGTTCCCAGCTCTGGAGCGCAGGATGGGCACGCTGCCTTGTCCCACCTGCTGTTTCTGTTTATTTGATGCAAAGAGGACAATTTAGAAAACCTCTTTTTGGTTCAGGAGATCCTACCAGAGGAAGAAACATAGGACCTGCCTGCCAGCCTTTCATTTTTCCTTGCTCTATCTTTTGTGGTAGTGGAGCCTGGATGCTGTTACCCATGTAAAAGGAAAGGTTTAAAGTGGTATCCTTTGGGCTTTTACCAGAACATGTTGCTGAACACCAAGCTTTTCAAGATGGTCCTTCTGAGCATCCTTAGAATCCTTCTTCTTTGGGGACTGGTGCTTTTTATGGAACATAGGGTCCAAATGACACAGGTAGGGCAGCCCTCTATTGCCCACCTGCCTGAGGCCCCTACCTTGCCCCTGATTCAGGAGCTGCTGGAAGAAGCCCCTGGCAAGCAGCAGAGGAAGCCTCGGATCTTAGGGCATCCCTTACGGTATATGCTGGAGTTGTACCAGCGTTCAGCTGACGCAAGTGGACACCCTAGGGAAAACCGCACCATTGGGGCCACCATGGTGAGGCTGGTGAGGCCGCTGGCTAGTGTAGCAAGGCCTCTCAGAGGCTCCTGGCACATACAGACCCTGGACTTTCCTCTGAGACCAAACCGGGTAGCATACCAACTAGTCAGAGCCACTGTGGTTTACCGCCATCAACTTCACCTAACTCATTCCCACCTCTCCTGCCATGTGGAGCCCTGGGTCCAGAAAAGCCCAACCAATCACTTTCCTTCTTCAGGAAGAGGCTCCTCAAAGCCTTCCCTGTTGCCCAAAGCTTGGACAGAGATGGATATCATGGAACATGTTGGGCAAAAGCTCTGGAATCACAAGGGGCGCCGGGTACTACGACTCCGCTTCGTGTGTCAGCAGCCAAGAGGTAGTGAGGTTCGTGAGTTCTGGTGGCATGGCACTTCATCATTGGACACTGTCTTCTTGTTACTGTATTTCAATGACACTCAGAGTGTTCAGAAGACCAAACCTCTCCCTAAAGTTCCTGGCCCCTCCAGGGAGCATGACGGGCCTGAAAGTAATCTGTGTTCCCTCCACCCTTTTCAAGTCAGCTTCCAGCAGCTGGGCTGGGATCACTGGATCATCGCTCCCCATCTCTATACCCCAAACTACTGTAAGGGAGTATGTCCTCGGGTACTACACTATGGTCTCAATTCTCCCAATCATGCCATCATCCAGAACCTTGTCAATGAGCTGGTGGATCAGAGTGTCCCTCAGCCTTCCTGTGTCCCTTATAAGTATGTTCCCATTAGCATCCTTCTGATTGAGGCAAATGGGAGTATCTTGTACAAGGAGTATGAGGGTATGATTGCCCAGTCCTGTACATGCAGGTGACAGCAAAGGTACAGATAGATCAGGTTTGCCCAAGAAATTAGAAAAGGATTTATAGTAAACAAATATTGTTAAATCTGAAAGTGCTCAACCCAAGTGCTCTACCCATTCTGTAGATTCTATTCCTTGCCTTCAGCATTGTACTTTAAGTCTTCTTCCCCTATTTATGAGTGACTCACTTTATAAAAACAGTTCTGATGCCAAATATCAGTATGTTTTGACCACTAGTCCGTCTTCTGAGGATCTAGAAGGTTTGGGGTGAAGACAGTAACTTGAGATTTTATACTCCTCTTCCTTGCCTCCTGAATCCTAGAAACTATTACCTAATTGAAGAGACCGCTTGCTTCTGTGTTTGGATTTCCCTCTAAATCTAAAACTGTTTCTTAGATGGACTAGGAAACTTTTAAGCAGTAATCTCCCTAGAAATCTTTTGAAGGAAACAGAAGGGAATCTTTTTCTAAGCCATCAGGGTTTTTCCTCTCAGGCTCTGAACCTGGCAGAAATGCCTGGGATGATCCCTTTATTATCCTGCTGTGAAGAGAGCAGCCGTTAATAAAGCCAGTAGGGAAATGTGAATGGAGCAGAGATGACAATCATTTCAAAACCTCTTATATCTATAGTGAAAAAATGAAGAGTTGTCATTGTTGATTAGAATTATGTATGGGGGAGTCATTTTAAATTTTCTCTGGAACAATAGATTTCACAGGGTATTTTCTCATTTTAGGTAATCCTTAAACCCTTGTTAATAATCCTACAGAGAAAGCTTGCTGGTGGCTCAGAGCCTGAGAGTTGGCCTGGTTGGGAGTGGAAGGCATAGAAGGCTGCAGTTAGGAAGGTTAATAGGGCAGTGGGGGAAGGGTGAAATGTGCTGAGACCTGGGGCTGACTTCATACTGGGCTTGCTTGTTTGTGTGTTCAGCTGGGCTCTGAGCATGGGTCTCTGGGGGAGACAGGCTTGCTGTATTGGGAGGCATGGAGTTCTGCCTTGGACTAAATAATGCTTGCACTGTGACTCTCTTCTATTCCTGTGCTGTATTGAAGTAATGGGGACTGGGTTGTGTTGCAAATAAATCATTTTTGTTGTTATAGAGAGTCTTGAATGTTTGGGAAATTGGGAGACAGTGGGTGGAAGGAATTTATTTCCTTTATTCCCTAGGCTATGGCCAGGAACTCAACCCCAATGCCCCAGCGTGTAGTTGGAGTTCTCCCTGAAGGCAGCACTGCTAACAATCAGCTCTCACCAAAGGGATCCATTGAAGTAGCCCAGTAAGGCATTTCCCCTGCCCAATTAACTAATCTTATGGTTGTTGTCAATGAAATGAGACAGATTTAGGGTGGTTTCATATATTGAAATATTTGCCAAACATATATCCCTATCTCTTTTTTACCTATCATACATTAACTTATTTTTACCACTCCATTCTCAATAATTGGTTCCAATTAAATGAAATATCTTACATGTCTATAAATACATAAATTTTATTCTGCCTGATAGGTTATTCCTTAACATCCTTTTGTCCATCTACCTTCTTTACTGTATCTTTAGGAATCAGCTCAGGTATTTCTCTTCATCTCAAAGCCCCTCCTGATACCCGTGACTCAGGTAGGATCTCACTATCTGTGCTCACAGCGTTGTTTGCTTTCCTTGAAGACACTCTAGTGTAACTGTGCTTGTTGCCAAAAGATGAAGCTTCTTTTGAGAGTTTCAACTGTGTTTTACCCATTTCCTTATTATTGGAGACTGGTCCTTGATGGATACAAGCATCGGACAGTCACACTTTTTTTGTGAGGGATGCATTCTTCCTAACATGGAATATTTCAATGTTCACATATCTCATTTTCCACTGGAATAGATGCAATAAAAGATAAACTTTGTATATAAAGCAGGGTGAATTTTTGTGCCTCGTTATTTCAAAATCATGATTCAAATTAGAATGTGACAGCTGTGTTCTTGAGTAAGGCAGTTCTTGGGATTATTAGTCTGTGAGTTAAAATGGGAGAGTAAATGTTGGCTTCCAGGCCAGTGATTTCTGCAACCCAGCTGGGGTAGGCACAAATACCTAACAGGCCTGAATGCAGACCTCGGTCCCAGGACCAGATTCTGAATTCAACATCTCAGTGTTCTTTGGAATTTTCAGGAAATCATGATCTCCTAGCCTTGATTTCTGAATATGTCTGAAACTTAATCTGTTTATGGAGGGCTCAGGGTTAATTCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGGGGAGCCTGGTGGGCTGCAATCCATGGGGTCGCTAAGAGTCAGACACGACTTAACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGCTGCCGTCTATGGGGTCGCTCGGAGTTGGACACGACTGAAGCGACGCAGCAGCAGCAGCAGGGTTAATTGGCCCTATTATCCATTAAGCCCTGAGCTGTCAGAATATACAAGGAAAATACTAGCAAGATGGAATCGGTTATGATTGATGTTACAGATTCTTTTCTTTTGAAACATTGCTTTCAAATCACTTTTTCTCAAGTCCAAAGTAAGAGATCTATACCTCAAACCTTTGGGAGAAAGGAGATATGCTTGCTAGTGAAGGAGGATGTATGGATGGCAGTCTGTCTGCCAAAGTGGGTGGAGAGAAATACTTACTTGGTCCAGAAATAGAAAGCAGAGAGTAAAGTCCACCTTGTCCCAGCTCCCCCACTGAATAGGCTTGAACTCTATTCAATGTGTCAGTGCCTAAGGAGCAGGTATTTGAGCTTGTTTCTGACCCTGGAGCTCTGTTGCATTTACCTTGGTAGTATATTTTGTCCAATTCTGGACAAAGTCGGGGAGCAGGTGAAACTTATCTTCAGTTTCACCAAATATTTGGTGCCTAATTCTGTAAAACTTTTCAAATGTCTTCAGTTAAGTCTCCCAACAGAACTATAAAGCAGGATGGATAAGCCCCATTAAAGAAAAACTGGTTTGCTGAGACATAATTTGCATACTAAAGAAGCCACAATTTTAAGTGTTCAATTCAGTGGTTTTTAGTATATTCAGAGTTGTGCAGAAAACACTGCAATTGATTTGACCACAAAAAGAAACCCCATGCCTGTTAGCAGTTAATCTCGATTTCCCTCACCCCAGCCCCTGGCAACTATTAATCCATTTATTTTCTTTTTCTGTAGATTATGGATATTTAGATAAGTCAAATCATGCAATATTTGGCTTTTTGTGACTGTCTTCACATTAGCATTGCACTTTCAAGGTTCATCTATATCATTCATTCTTTTTTTTTTTATTGAATAAAACTCCATTTTAGAATATGCCACATTTTATTTATCCATTCATCAGTTGATGGGCATTTGAGCTGTTTCTACTCTGGCTATTATGAATAATGCTGACTTGAATGTTCATGTGGAAGTTTTTGTGTGGACATATATATTCAATCCTCTTGCATAAATATTTAGGAGTATTCATGCTGAATCATATGGTATGTCTATGTTTAACATTTTGAGGAACTGTTAAACTGTTCTCCAAAGCAGCTGTACCATCTTACAATCCAAAACTGTCTGAGGGTTTCAATTTCCCTACATCCTCACCAACACTTCTTATTGTCTGCCTTGCTTATTTTAGCCATACTGGTAAAGAGCTATTTTGTTGTGTTTTTGAGTACATTTCCCTGATGACTGACTATGTTGAACAAGTTTATTTGCAACTTGCATATCTTCTTAAATGTTCATTGAAGTTTGCCCAAGTTTTAATTGGATTTTCTAATATTTTTGAGCTGTGTAAGTTCTTTATATGTTCTGGATGTTAGTCTCTTATCAGATGTATGATTTGCAAATATTTCCTCTGATTCTGTGAGTTGTCTTTTGACTTTTTTTTTTTAATTTTAAATTTTATTTTATTTTTAAACTTTACATAATTGTATTAGTTTTGCCAAATATCAAAATGAA EMBV3_05698 CTGCTCGTGGCTGGGGTTTACCTGGTGGCAATGGCAGATGCTCTGATACACACAACATTA Gene GeneID:785332|LOC785332:XM_002688483:52_cdna Constitutive 0 NULL GeneID:785332 7 GENE LOC785332 NULL similar to olfactory receptor, family 5, subfamily W, member 2 EMBV3_11809 GGGTTGAGAGGGGCCTTAAGAAGGACAGTTTGTTGTAGGAAAGCAATTCTGTACATGAGT Gene GeneID:513579|PICALM:NM_001101977:17_cdna Constitutive 0 NULL GeneID:513579 29 GENE PICALM MGC159850 phosphatidylinositol binding clathrin assembly protein EMBV3_30941 CCGCGTCGTCTACAGCCCGGGGGAACCGCTGCCATCCGCGTGACCTGCACGGGGTCCTGC Variant GeneID:786098|ARRDC1:NM_001080365:86_cdna 120^165 1 EMBV3_43302 GeneID:786098 11 GENE ARRDC1 MGC142598 arrestin domain containing 1 EMBV3_38066 CTACCCCTCGCCCTTTGAATTGTCACTGTTCTGTACGAGGCTGCTTGTTTTTGGGTGTTG Gene GeneID:538904|LOC538904:XM_002699034:50_cdna Constitutive 1 NULL GeneID:538904 29 GENE LOC538904 NULL similar to Density-regulated protein EMBV3_36500 TCAAGGATTATGTGGAGGCTGAAGCAGGAAACGACCCTCTTCTTAAAGGCATCCCTGAGG Gene GeneID:281797|GNGT2:NM_174328:23_cdna Constitutive 0 NULL GeneID:281797 19 GENE GNGT2 NULL guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 EMBV3_08072 CACAAGACACATCAGGCCCCTGCCTCTGCCTCATCACTGCCAGGGGCTGGAGCCCAGTTA Gene GeneID:507571|DYRK1B:NM_001081515:559_cdna Constitutive 0 NULL GeneID:507571 18 GENE DYRK1B DYRK1A MGC155217 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B EMBV3_04694 TGTCGGTGCAGAAATGAAGGCTGTGCAATCGAACAAGAGCAGAAACGAGAGACTGTGTCG Gene GeneID:615296|LASS1:NM_001083514:65_cdna Constitutive 0 NULL GeneID:615296 7 GENE LASS1 MGC140134 LAG1 homolog, ceramide synthase 1 EMBV3_10031 TGCTCCTTGGTTACTATCGGAATCTGGTTCACCCTCTTTTGGTGGGCAGCAGCATATCAG Gene GeneID:614093|PXK:NM_001099132:277_cdna Constitutive 0 NULL GeneID:614093 22 GENE PXK MGC139332 PX domain containing serine/threonine kinase EMBV3_27301 CATGGCCTGGTCCAAACCAAGAAACGTACAGTGGTCTTCGAGGGGCAGCACGAGGTGGTC Variant GeneID:509841|TIMM23:NM_001083658:8_cdna 445^614 1 EMBV3_30132 GeneID:509841 28 GENE TIMM23 MGC151644 TIM23 translocase of inner mitochondrial membrane 23 homolog (yeast) EMBV3_06955 TGGTCAGCACTCCGGAGAGAGGTATGGAGAGAGGGTGGGAAGGCCACTCCTCAGGGACCT Gene GeneID:100297454|LOC100297454:XM_002696682:337_cdna Constitutive 0 NULL GeneID:100297454 21 GENE LOC100297454 NULL similar to ubiquitin-like 7 EMBV3_43407 AACGCTAACCAGTGTCCAGGTGGCTCAGTGTTGCCTGTATAGCTTCATGCCACTGGTGAT Gene GeneID:782215|LOC782215:XM_002698714:142_cdna Constitutive 0 NULL GeneID:782215 27 GENE LOC782215 NULL similar to solute carrier family 35, member F2 EMBV3_28149 GAGCAAGCGCTTCGGCGCCTACAACTACCGGTCCACATTGGCCAAATGTATTCAACCGAC Variant GeneID:614011|LYRM4:NM_001076306:247_cdna 391^511 1 EMBV3_42178 GeneID:614011 23 GENE LYRM4 MGC142651 LYR motif containing 4 EMBV3_32116 CTGCTGTGTCCAAGTTTGGTGCATCCTCCATGACACAATTACCTCAACAATCTGGAAATG Gene GeneID:505814|HFM1:XM_002686256:60_cdna Constitutive 0 NULL GeneID:505814 3 GENE HFM1 NULL HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) EMBV3_29229 TCACTAGCTGATGAATTCCTAGAGGATAGGGGAGATGCCTAATCAACTCTTGGGCCACCC Gene BVV0102_187623 + 0 NULL GK000015.2:47005491-47042651 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02205 TCACACTGTGGTGGCTTTGCAGACCAGAATCTTAGGTTGCCAAGAAGAGGCAAGGGTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34633 GGTGTTTGAGCAAGTCAGTACCCCCAGACCCGAATTCTCAGGGCTCCATCCCTTCTTCCT Gene GeneID:352959|RHOT2:NM_178316:48_cdna Constitutive 0 NULL GeneID:352959 25 GENE RHOT2 MIRO-2 MIRO2 ras homolog gene family, member T2 EMBV3_29545 GAGATTACTCAGGTTTGAGATATTTTTCTTGGCACGGGATTAATTGATTTCTGCACAGGG Gene GeneID:512060|SEPHS2:NM_001114732:296_cdna Constitutive 0 NULL GeneID:512060 25 GENE SEPHS2 SPS2 selenophosphate synthetase 2 EMBV3_09831 CCATCTTCCATAGTGGCTATATCAGTTTATGTTCCCACCAGCAATGCAAGAGGGTTCCCT Gene GeneID:517675|FTSJ1:NM_001077934:69_cdna Constitutive 1 NULL GeneID:517675 X GENE FTSJ1 MGC143353 FtsJ homolog 1 (E. coli) EMBV3_15207 CTGGGATACTGTATACTTCCCCTGACAATGGCAATGCTGGTTTGCCGGCTGGTACTTTTG Gene GeneID:540347|YIPF6:NM_001101206:74_cdna UTR3_Alt 2 NULL GeneID:540347 X GENE YIPF6 NULL Yip1 domain family, member 6 EMBV3_19439 GGCTGGGGGTATAGAAGATTCTCATGTTTTAAATTGGAGACTGGTTTTAAAGTCAGAGAT Gene GeneID:510907|ADAM19:NM_001075475:8_cdna Constitutive 0 NULL GeneID:510907 7 GENE ADAM19 NULL ADAM metallopeptidase domain 19 (meltrin beta) EMBV3_39767 CTTTCAGAGTGGACTGACGTGGGAGTTGGGGTCTAGCTAAATCCTTTTTACAAGAGACAC Gene GeneID:509250|ZNF266:NM_001104968:2_cdna UTR3_Alt 1 NULL GeneID:509250 7 GENE ZNF266 ZNF426 zinc finger protein 266 EMBV3_04798 GTAGGTAACAAGTTTTGGAGGTATGACGAGAGGAGACAATTCCTGGACCCTGGTTATCCC Gene GeneID:526981|MMP12:XM_002683746:2_cdna Constitutive 0 NULL GeneID:526981 15 GENE MMP12 NULL matrix metallopeptidase 12 (macrophage elastase) EMBV3_24575 CTCAAGCCAGTGTTTGGCGGCATTAGAGGTGTGGGGGAGTACTGTCGTGACTGAATGTAA Gene GeneID:532406|GIGYF1:XM_002698205:764_cdna Constitutive 0 NULL GeneID:532406 25 GENE GIGYF1 NULL GRB10 interacting GYF protein 1 EMBV3_23442 TCACCTGCTCTAAGTGTGATTGGCTAGATGGGAAGCACGTGGTGTTCGGAAAAATCATTG Gene GeneID:513428|PPIH:NM_001075618:155_cdna Constitutive 1 NULL GeneID:513428 3 GENE PPIH MGC142309 peptidylprolyl isomerase H (cyclophilin H) EMBV3_24511 TTCTATTATGTAAAGGTTAATTCTGTGTATATCTCAACTCTGTTGATTGGTTTTATACCG Gene GeneID:513309|GFM1:XM_002684956:221_cdna Constitutive 2 NULL GeneID:513309 1 GENE GFM1 NULL G elongation factor, mitochondrial 1 EMBV3_11373 GGAGCACGTGACCTCAGTCAATCCAATGGGAGTCGGTTTTGGAACGTAAGCCATAAAGAC Gene BVV0102_112246 + 0 NULL GK000005.2:27175687-27213668 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191230 1 XLOC_116848 NonCoding TCONS_00191230 XLOC_116848 NonCoding NonCoding - 5:27200180-27205223 - TSS143339 441 0.63265306122449 2 0.912931376437921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.68953716276672e-05 0 0 0 0.000740385187107385 0 0.000380149513118559 0 0 0 0 0 0 0 noncoding CTGGGAGCAGGAGGTCAGCTAGCCAGGGAGCCCGCTCTCAGCTGTCCCGGGGTTCCTAAGCCCCAGATCAGCAGGGCAACTTCTGCAGGCCTTCTGGAAGTCATCTTCCTTTGTCAGAGGTGCTGGCTGATGACAGCGAACGCTTTCATGCTGGCCTGGAGGGAGGAGCACGTGACCTCAGTCAATCCAATGGGAGTCAGTTTTGGAACGTAAGCCATAAAGACTGGGAAAGTGGCTCTCCCTTGGTTGCCATCCTTGCTGCAGCGTGGACATGGTCATGGTCAGCTAAGAAGGAAGCCCACACAGAAGGAAACAGTCAAGGGAAGGAGAGAAAATCCGATGCCATCATCAAGTCCCTCATCTGGCTGTACCAAAGCCAAATAAACATCCCAAACCTCCCAATTATGTAAGCAAATAAATGCTATTTCATGCTTAAGCCCA TCONS_00191231 s 5' 8413 TCONS_00191231 s 5' 13455 EMBV3_17143 AATACTGAATTCTACCAACCGCCCTATTGATTTTTTGTGTGTGTATAAATGCTTAAGAGC Gene BVT0102_320257 + 0 NULL GK000020.2:10148632-10154908 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114462 TCONS_00114463 TCONS_00114464 TCONS_00114467 TCONS_00114459 TCONS_00114456 TCONS_00114468 TCONS_00114466 TCONS_00114469 TCONS_00114457 TCONS_00114460 TCONS_00114470 TCONS_00114465 TCONS_00114458 TCONS_00114461 1 XLOC_069297 Coding TCONS_00114465 XLOC_069297 Coding Coding OCLN 20:10152126-10200802 j TSS85381 4947 1 TCONS_00114465_7 522 0.17242773398019 9 0.898551617873652 0.000856733539836921 0.000458329598894092 0.000551819476584423 0.000352487461567805 0.000907068851028314 0.00017172535183613 8.64413037411992e-05 0.000276945497697689 0.000592361747002474 7.26218989573982e-12 2.04474095310576e-34 3.5656083043716e-05 1.20493036202119e-26 2.16403249287724e-05 2.95033272215146e-257 0.00118028137717796 0.000597966247481393 0.00194154620806864 0.00073146016104684 8.80259172974598e-05 0.000148513401457022 0.000589184258118588 0.000197923127532293 0.0015567725570841 0.00050595227909301 0.000752533225087071 0.000941560286214984 9.64140563949072e-05 9.58228808031001e-23 1.16313457938866e-05 XM_005221439.1 OCLN PREDICTED: Bos taurus occludin (OCLN), transcript variant X1, mRNA. 0.0 4794 100.00 0.53709318779058 NM_002538.3 OCLN Homo sapiens occludin (OCLN), transcript variant 1, mRNA. 0.0 2875 82.27 0.579543157469173 TCONS_00114465_7 sp|Q16625|OCLN_HUMAN OCLN_HUMAN Occludin; 0.0 931 90.25 0.998084291187739 2 coding 0 0 0 0 0.757185456258895 0.113108899099451 -0.137074462003508 0.0229108631592614 TGAGCGCACGCCCGGGCTCCCGCCGTGTTTGGTTCGCTGGGAGAAGATTGGCTGATCTCAGGAGGCTCCGGCAGTGCTCATCCTGAAGATCAAGTGACCACTGACACCAGCCATGTCATCCAGGCCTTTTGAAAGTCCACCTCCTTATAGACCTGATGAATTCAAACCTAATCACTACACACCAAGCAATGACATATATAGTGGAGAGATGCACGTTCGACCAATGCTCTCTCAGCCAGCATATTCCTTCTACCCGGAAGATGAAATTCTCCACTTCTACAAATGGACCTCTCCTCCCGGAGTAATTCGGATCCTGTCTATGCTTGTTATCGTGATGTGCATCGCCATTTTCGCCTGTGTTGCCTCCACTCTTGCCTGGGACAGAGGCTATGGAACCTTAATGGGAGCTGGTGTTAACTACCCTTATGCAGGAAGTGCCTTTGGTAGCTACGGAAGTGGCTATGGCTACGGCTATGGCTATGGTTATGGCTATGGAACAGGCTATACAGATCCCAGAGCGGCAAAGGGATTCCTGCTGGCCATGGCTGCCTTTTGTTTCATTGCTGCATTGGTGATATTTGTTACCAGCGTTGTAAGGTCAGGCATATCTAGAACAAGAAGGTATTATTTGACTGTGATAATAGTGACCGCCGTCCTGGGCATTATGATGTTTATTGCCACAATTGTCTATATAATGGGAGTCAATCCAACTGCCCAGGCCTCTGGGTCTCTCTACAGTTCACAGATATATGCCCTCTGCAACCAGTTTTATACACCTGCAGCTACTGGACTCTACGTGGATCAATATTTATATCACTACTGTGTGGTGGATCCCCAGGAGGCCATTGCCATTGTACTGGGGTTCATGGTTATTGTGGCTTTTGCTCTAATGATTTTCTTTGCTGTGAAAACTCGAAGAAAGATGAACTGCTATGACAAGTCAAATATTCTGTGGGACAAGGAACGTATTTATGATGAGCAGCCTCCCAATGTTGAAGAGTGGGTTAAAAACGTTTCTGCAGGTACACAAGACATGCCTCCTCCCCTCTCAGACTATGTGGAGAGAGTGGACAGCCCAGTGGCCTACTCCTCCAATGGTAAAGTGAACGAGAAGCGACTGTATCCAGAGTCTTCCTATAAATCAACCCCGGTGCCGGAAGTGGCTCAGGAGCTGCCATTGACTTCACCTGTGGAGGACTTCCGGCAGCCTCATTACAGCAGCAGTGGTAACTTGGAGACGCTTTCAAAAAGGGCTCCCGCGAAGGGCAGGGCAGGGAAGTCAAGGCGGGCAGAGCAAGACCACTATGAAACAGACTACACGACCGGAGGCGAGTCCTGCGATGAGCTGGAGGACGACTGGATCAGGGAATATCCACCTATCACTTCAGATCAACAAAGACAACTCTACAAGAGAAGTTTTGACACTGGCCTACAGGAATATAAGAGCCTACAAGCAGAACTTGATGAGGTCAATAAAGAACTCTCTCGTCTGGATAAAGAACTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCTGCCGACGAGTACAATAGACTGAAACAAGTTAAGGGATCAGCAGATTACAAAAGTAAGAGGAATTACTGTAAACAGTTGAAGAGCAAATTGTCACACATTAAGAAGATGGTTGGAGATTACGACCGACGGAAAACATAGACGGCAGACGCCACATTGTTGGAGAGGTTAAGAAGTATCTGACTGACATCTCTGCAATGTTATCAGGAGTCAAAATGACTTTGGGCTCTAACCCGGGAGGCCAAATCTCTCTGATCATTACAGAGTTTTGGTAGCTTTAATATCATCAGTGTTGAAGCAGTTTATAAATAGCTTTTGATAATCAACTGGGCTGAACACTCCAACTAAGGATTTTATGCTTCAAACATTGGTTCTTGTGTTAAGAACTGTTATTTGAGGTTTTTAAACTTTTCAGGAAGGTCCTGGAGTGGACTGTGCTATGAACTTTGACATCCTGGGCAATCAGGTCTTAATACCTAAGTGTGTGCTCATTGGGCTGGTCTTGTAGGGGGTAGTTTAATCCTCCCAGAATTCTCCCTTCAGGTAACTGTTACTTATAAATAAATAATCATTCATTTTCAGATAAGGAAACTGGGCCCTTGCAATAAAGTCTGAAGTGAAACTGCTTGTTGGCTAGCTTGCAGTTTTGGTTAAGTCTATTTTATGACTCCATTGATAAAGTCCCCTGCCTTTTCCTATTTTAGCTACTATGAATACTGAATTCTACCAACCGCCCTATTGATTTTTTTTGTGTGTATAAATGCTTAAGAGCTTTTTATTTCATGTTATCCTGGTAATAAAGATCATGTAAAAGTAACAAATGTATGAAATTTGAAGATTGTAAATACATGTTTACTTTTGAAAAATCAAAGTTTAAACCTTCTGGTTAGAATTTTGTTGTGTATTTTTAAATGCCTTTTATCTTTTATGGTTTACATACTTTTTTAAAGCCAACTAGGCGTTTCCTTTTTATCAAAGTATCTAATTACATTTATAATTCACTTCTGGGAATGTTCAAGTTTTGTACATATTTTATAATTATTAAACCTGGTGTTTTCTTTCCATAATATACCTTTTTGACATCATTAGTGCTGTTAATATTAAGCTGTGGAAAACTACGCTCGGAAGTTGTATTTGTTGTTGTTTTAAATTATTTTGGGTGCTGTGCTGGTTGGTAGTATCCTAAATCCTTTGGCTAACAGAAGGCTGACTTGTCTGGAAATGGAATCCAGTATCGTAAAGCACCAAATTATTTCAAATGGTGCCCTTTAATTCTCAGCATTTTTTTTTAATTCAATATTTTCCTGGTAAAGTAAAATTAGCTGATAATACTGGATATATAGCTAACCAAATTGACTGTGATTATCCCCTCAGTTTAGAACTCTCATTAAAATATATTGTTTTTAATATATTAGTCTGAATCATTTTCCAAAGATAACTTTTAAATAAGGTTTCCATTATAACACTGACTTAGTTCTTCAAGTTGGAAAAATTCTTAATTTTCCGTGTATTGCACATGCTGACTACAGAAGGTAATAGTTTGTTTTTCATGCCTTTTGGAGTCATGCCAAATAGTGAGGACTCTCTTGAGCAATGTAATTGATTTTTTGTGTGTGTTAAAGTTTAAACTCTATTCTAGGAAGTCAGCATAGTTTACGAAGGCACGTTTGCCAGTGTTGTGATGAAACAAAGCTATTCAGCTGAATGCAGAAAATCAAGTAGCATGAGTTTGCATTATAAAATTGTGCCATAAAATTGGACTTTGAAAGTTTAAAAAATCATTTTCCAAATGTGGTACTTACACTCTTGACCACTCCAGGAGCCAGGATCAGGATGGAGGGGAGTGTTGGCTTTCCCAACCAGGAGTAGAACCTGTGCCCCCTGCAGTGGAAGTGCAGAGTCCTAACCATTGGTGATGGTGGTGGTGGTCTAGTTGTTAAGTCGTGTCCAACTCTTTTCGACTCTATGGACTGTAGCCTGCCAGGTTCCTCAGTCCATGGGATTTCCCAGGCAAGAATACTGAAGGGGGTTGCCATGCCCTTGTCCAGGGCATCTTCCCCATCCAGGAATTGAACCCAGGTCTCCTGCATTGCAGGTGAATTCTTTACCAACTGAGCCATCAGGGAAGCCCTCCTAACCACGGGACTGCCAGGGAATTCCCCTGGGGGATTGGCATTAACCAGTGGGATATAATTTTGAAAAACTACTCAGGCAGTTTTCTAGTCTGAAAGTTGGAGGTTTAGCTTAGATTTCAGAGATCTCTTCCATCTTTGATCTTCTCTGGTTATGTTTGCATTATGCTTTCCGCTATAAACCACTGTTCCAAAGATTTTGTTGAAAAAGCACGTGATTTGTCTGATGAGAATTCACAACATAAAGTGATTCCCTTACATGTGTAAGGATTACACTGGATTACAAGTAGATAAGATCAATATTTTAATTTCTTTTTATTTGGAAAAATTTAAAGAAACACAGAAAACTATGAACATTTAAACCCACCACCCAGAAATAACAAGTGTTAATATTTTGTCATATGTGCTTTGTATTTTTTGAAATAAATTTAAAACTATAAGTATTTGTAGTAACAGTTACATAGTATACACATATATGGAATCTAATTTAATCTTTATGATAGCCTCTTGACATAACCATTTCTCATTCTCATTTTACAGATAAACTAATGATTTGATAGGTTAATTGGTCCATTGTCTCATTAGCAAGTGACTAAACTAGGATTGGGATGATCTGTTGGAATATTACCTTCTATATTCCCATTCTAGGTTGACTTTGTTAATAAATCAGCAGGTTGGATCAGGTTGGATAAGGTTGGATTGTTCTGTCTGCTGTTATTAATCCTGTTATAAATTTGAGTGCATTTGACCCTGGACCCTTGAACAACTTGGGTTTGAACTGCGTGGGTCTATTTATGTGTGGATTTTTTTTTTTTTTTTCATTGAACACATACTGTATGATCCATGAATGCAGAGGGCCAACCGTAAGGTTATATGTGGATTTTTGACTGCTTGGAGGATCAGCACCCCCAGCTCCCTCATTGTTCAATAGTTATCTGTACTTTTCATTAGCATAAGGTGCTTCATGTAGAAGATCTGCAGTATCTGTGAATGCCTGAATGGGTATGCCTGTGTAAAGAAGAGTCAGGGCAGAAAACTGCTTTAGCCATGACTCCAGGGATCTTAAGTTGAGGTTGAAGCAGACAATCTCCCTGCTTCAGAGATGGGATAGAAGTATCTCCCATCTGTTGTTCAGTCACTTAATCGTGTCTGATTCTTTGTGAGCCCTTGGACTGCAGCATACCAGGCTTTCCTGTCCTTCACTGTCTCCCAGAATTTGCTCAAACTCGTGCATTGAGTTAGTGATGCCATCCAACCATCTCATCCTCTATTGCC EMBV3_40725 AGAATAAGAAAGTGAGACCTCGCTACAGTGGCCCTGCACCCCCTCCCAACAGATTCAATA Gene GeneID:510313|BUD13:NM_001098006:56_cdna Constitutive 0 NULL GeneID:510313 15 GENE BUD13 MGC151573 BUD13 homolog (S. cerevisiae) EMBV3_02855 CGCACCAGGTCTTGTAGCAGCGCCTCCTCGAGGGAAGTCTCAGGTTGCCCTGAAGATCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38891 CCCCAGGCACTGAAAAACACCCCAAGTAAAACGCAAGTAAAGATAAATCCTGGGATCATC Gene BVT0102_084939 - 0 NULL GK000008.2:56034219-56443049 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05594 TGTCAACCACTTCTGGTGCCAGGAAAAGCCGTCCAGTGAGCACGAGAATGCCTATGAGAA Variant GeneID:613915|PDZK1IP1:NM_001046521:289_cdna 303^398 1 EMBV3_17183 GeneID:613915 3 GENE PDZK1IP1 MGC137241 PDZK1 interacting protein 1 EMBV3_32855 TGTCGGCCTTGGATTCGGTGCCTGGTCCTGCTTATTCTTTCACTGCCACTTAAGACTCCA Gene GeneID:522886|PPL:XM_002697888:465_cdna Constitutive 0 NULL GeneID:522886 25 GENE PPL NULL periplakin EMBV3_07475 TGGGAAAGTGGTAGCTTGAGCACATCACTCCTGCCCTCTTTTTAAAACTCAGTTCAAGTG Gene BVV0102_087394 + 0 NULL GK000005.2:29428301-29570395 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03146 CAGTTTGAGAAGGTCACCGAGGAGCCCATGAAAGAAACCAAAGGAATGATCTCATTGAAA Variant GeneID:510998|MPP1:NM_001075484:2_cdna 381^545 1 EMBV3_29394 GeneID:510998 X GENE MPP1 MGC139660 membrane protein, palmitoylated 1, 55kDa EMBV3_05198 CCTGGGTATCCTGGGGAGGAGCATTAAGAAATGTGAGACTCTAGCTGTGGGTGTGGTTGT Gene GeneID:539436|ITPRIPL1:XM_002691135:140_cdna Constitutive 1 NULL GeneID:539436 11 GENE ITPRIPL1 NULL inositol 1,4,5-triphosphate receptor interacting protein-like 1 EMBV3_17792 ACCACGCTGAGCTTTCTGGCACCACCCTTGAGAATGTGGGCGAACATGGGTTCTTTCTGT Gene GeneID:768242|ABHD12:NM_001078116:53_cdna Constitutive 1 NULL GeneID:768242 13 GENE ABHD12 MGC140778 abhydrolase domain containing 12 EMBV3_22809 AATGGTTATGGTGGGCCGGACTGCTATCAATGCCATTCTTTCTTCATACTTTCTAAATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22143 AGGTGGTTAAAGCAGTATTGGAACACCAAGGCCAAAGAATGCTAAGCAGCCAGAGCGTGA Variant GeneID:780877|SNRPN:NM_001079797:5_cdna 319^616 2 EMBV3_04073 GeneID:780877 21 GENE SNRPN MGC139729 small nuclear ribonucleoprotein polypeptide N EMBV3_02281 AGGAAGCCCGTTTCGTAACCGTGTGTCGTGGTGCTTTATTGTACACCCAGTGGCGTTCTT Gene GeneID:532990|H2AFY:NM_001046340:37_cdna Constitutive 1 NULL GeneID:532990 7 GENE H2AFY MGC137823 H2A histone family, member Y EMBV3_29939 GGATTAAAAGCTGCAGAGGTGTCATCACTTCCACCATCAATTGTCTTGGATGCCAAAGAC Gene GeneID:616664|MSH4:XM_002686300:178_cdna Constitutive 0 NULL GeneID:616664 3 GENE MSH4 NULL mutS homolog 4 (E. coli) EMBV3_02833 TAGACTAACCTCAGTGGATCTTAGAGAATGGAGTGGGGGAGTTAGGGCAGCCAGGATCTC Gene BVT0102_014924 + 0 NULL GK000002.2:63111816-63118921 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105466 TCONS_00105462 TCONS_00105467 TCONS_00105470 TCONS_00105471 TCONS_00105474 TCONS_00105463 TCONS_00105475 TCONS_00102548 TCONS_00105464 TCONS_00105461 TCONS_00105468 TCONS_00105472 TCONS_00105465 TCONS_00105473 TCONS_00105469 2 XLOC_062568 XLOC_061891 Coding TCONS_00105468 XLOC_062568 Coding Coding MGAT5 2:63113106-63463244 j TSS77812 8396 1 TCONS_00105468_3 739 18 0.976072223158364 0.00572128932766625 0.00332189556511649 0.00296653959375292 0.00263397822732651 0.00350760459193309 0.00200055837193469 0.00113274360889534 0.000906237946443946 0.00142358547029239 8.8007905219207e-05 1.95809576425107e-20 7.2075025304491e-17 2.79393624588408e-05 0.000143398168313928 3.23979392784942e-09 1.36419330147833e-20 3.30721515771418e-14 4.62883874366484e-26 6.5217489640904e-05 0.00324991376158057 0.0016040522954908 9.94983494126603e-23 0.000146330027138306 1.7469480405908e-12 0.00373467964773025 0.00177750460815566 0.00190520884232412 1.28374313073594e-15 4.45166947443348e-65 2.52478682872886e-35 XM_005202537.1 MGAT5 PREDICTED: Bos taurus mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase (MGAT5), transcript 0.0 1.466e+04 100.00 0.967722725107194 XM_005263667.1 MGAT5 PREDICTED: Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase (MGAT5), transcript 0.0 3413 85.20 0.3532634587899 TCONS_00105468_3 sp|Q09328|MGT5A_HUMAN MGT5A_HUMAN Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A; 0.0 1468 95.95 0.998646820027064 2 coding 0 0 1 1 -0.0180585479998775 0.884148834381226 0.011178086500788 0.805607602871894 AGAGAGCTGCTCAGTGGGTTCTGGGGCCGTCGGTGGGTCCGCAGCTCTAGAGACCTGGGCTTTTGTGAAGCACAGCTCCCTTGCTCTGGGTGCCGGCAAGCCTTCCTTGGCCTGCATCGGGGGAATGACTGTCCTTGTACCAGCTGACTGAACGGGACTGGGATAAGAGCCTGAGTGATTACTGTTCTAACGTGGACTTTGGAGGCAGAGCCATCAGGCCATGATGGAAACAAGGCAAGGAAATCAGCTGATGCAGGAGCCAGAGTGAGTCGAGGAAACCCGCAAACCCAGCCAGTACCATGAGCTCGCGTCTCCCCTCTGCGCTGTAGGAACCCGGGGCAGGCGAAGTCGGCAGAAAGCAATGGCTTTCTTCACTCCGTGGAAGCTGTCCTCTCAGAAGCTGGGCTTCTTCCTCGTGACTTTTGGCTTTATTTGGGGTATGATGCTCTTGCATTTTACCATCCAGCAGCGAACTCAGCCCGAGAGCAGCTCCATGCTCCGGGAGCAGATCCTGGACCTCAGCAAGAGGTACATAAAGGCGCTGGCTGAAGAAAATAGAAACGTGGTGGATGGACCCTATGCGGGGGTCATGACGGCCTATGATCTGAAGAAGACTCTTGCTGTGTTGCTGGATAACATTTTGCAGCGCATTGGCAAGTTGGAGTCAAAGGTGGACAACCTCGTAAGCAATGGCACAGGGACAAACTTGACCAACTCCACCACACCTGTTCCCAGCTTACTTGAGAAAATTAATGTGGCAGATATCATTAATGGAGCTCAAGAAAAATGTGTATTGCCTCCTATGGATGGCTACCCCCATTGCGAGGGGAAAATCAAGTGGATGAAAAATATGTGGCGCTCGGATCCCTGCTACGCAGAATACGGAGTGGATGGGTCCACCTGCTCTTTTTTTATTTACCTCAGTGAGGTTGAAAATTGGTGTCCCCATTTACCTTGGAGAGTGAAAAATCCCTATGAAGAAGCTGATCGTAATTCATTGGCAGAAATTCGTACAGATGTTAATATTCTCTACAGTATGATGAAAAAGCATGAAGAATTCCGATGGATGAGACTGCGGATCCGGCGAATGGCTGATGCGTGGATCCAAGCAATCAAGTCCTTGGCAATGAAGCAGAATCTTGAGAAGAGAAAGCGGAAGAAAGTCCTTGTTCACCTGGGCCTCCTGACTAAGGAATCTGGATTTAAGATTGCAGAGACAGCTTTCAGTGGTGGCCCTCTTGGTGAATTAGTTCAGTGGAGTGATTTAATTACATCTCTGTACTTACTGGGCCATGACATTAGGATTTCAGCTTCACTGGCGGAGCTCAAGGAAATAATGAAGAAGGTCGTTGGAAACCGATCTGGCTGCCCAACTGTAGGAGATCGAATCGTTGAGCTCATTTATATTGATATTGTAGGACTCGCTCAATTCAAGAAAACTCTTGGACCATCTTGGGTTCATTACCAGTGCATGCTCCGAATTCTGGACTCGTTCGGCACAGAGCCAGAGTTCAACCATGCCAACTATGCCCAGTTGAAAGGCCACAAGACGCCCTGGGGCAAGTGGAATCTGAACCCACAGCAGTTTTACACCATGTTCCCTCACACTCCAGACAACAGCTTCCTGGGCTTTGTGGTCGAGCAGCACTTGAACTCCAGCGACGTCCACCACATCAACGAAATCAAGAGGCAGAACCAGTCACTCGTGTACGGCAAAGTGGACAGCTTCTGGAAAAATAAGAAGGTCTACTTGGACATCATCCACACATACACGGAAGTACACGCGACTGTTTACGGCTCCAGCACAAAGAACATTCCCAGTTACGTGAAAAACCACGGGATCCTCAGCGGACGAGACTTGCAGTTTCTTCTCCGAGAAACCAAGCTGTTTGTTGGTCTTGGGTTCCCGTACGAAGGCCCAGCTCCCCTGGAGGCCATCGCAAATGGATGTGCTTTTCTGAATCCCAAGTTCAACCCACCCAAAAGCAGCAAAAACACAGACTTTTTCATTGGCAAGCCAACTCTGAGAGAGCTGACGTCGCAGCATCCTTACGCTGAAGTTTTCATCGGCCGGCCACACGTTTGGACCATTGACCTTGGCAATCAGGAGGAGGTCGAAGATGCCGTGAAAGCGATTTTAAGTCAGAAGATTGAGCCATACATGCCATATGAATTCACATGTGAGGGGATGCTGCAAAGAATCAATGCTTTCATCGAAAAACAGGACTTCTGCCATGGGCAAGTGATGTGGCCGCCCCTGAGTGCCCTACAGGTAAAATTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTATGTCAGGAGAACCAGCTCATCTGTGAGCCGTCCTTCTTCCAGCATCTCAACAAGGACAAGGACCTGCTGAAGTACGATGTGAACTGCCAAAGCTCAGAGCTGGCCAAGGACATCGTGGCACCCTCCTTCGACCCCAAGAACAAGCACTGTGTGTTTCAAGGCGACCTCCTGCTGTTCAGCTGTGCTGGTGCCCACGCCCGCCACCGGAGGATCTGCCCCTGCCGGGACTTCATCAAGGGCCAGGTGGCTCTCTGTAAAGACTGTCTATAGCGGCCACCACTCCACCCGCGCCTATGCTCTGCAGGGGGGAGACAGTGGCTCCCGCCCCATCAGGGTGGGGCAGGGACACAGACGCAATTCAGGGACTCTCCCCAGAGCCTGAACGTTTAGGTGAAAGGTCTTGATTTGGTACTGGTCCCGCTGCAGTCAGAGCATCACAGTGGAGCCAACCTCAGGCCAGGAACCTGGCTTCTCCCTGGCACAACTTCGTCTTTAATTTTGGAGGAGCTACTGTAGGGAGACTGTGCAGCTGCTCCAGGATAAAAAAAGAGAATCTCAATATTCGTTTAAACAAAACAAAACCAGAGGAGGAGTTGAGCTAGTCGGAAAGAACTTCCTACGGGAACATTCCTAAACCCATTAATTTATTTATTTGGGAGGGAGGGAGAGGGAGCTGGGGAGGGCAAAGAGGGATTGATTGCGCGTCTTGCTACTTCTCTGATTTTCCTCTGTTGGCCATCCCTCTTCACTATAACATGACTGTTGTCTGCTTTGGGCAGGGTGCACCATGGGGCTAGTGGCATGATTAAGGGCAGCTGTGGGTACCTAGCTCCTCAAAGTGGATGGTGGCAGAAGAAAATAAATTCCTTGTGCTTAGCAGGTGGCAGAGGCTAGGGGATAGGCACCCCTTGGTTGTCCGGGGAAATGCCTGTGTGGTCCAGAGAACCCAGCAGGGACCAGAGATGGGCTGCTTTGCAGTGACAGGCTCCTTTCCTCTGTTCCATCACACCCCCCAAGGTGGAACACACCCCCACACAGCTGGGCTGTCATTTCCGGTTAGGATTAAAAGCTACCCTTGCACGTGGAGGGGTGCTCTTTACCCCCTCGAGAAGGGGTGTCTTTGAACTGCGATTTGGACAGGGATGAAGCTGGTCCCTAAGAACTAGTGGCACCACCTGAGCTGGGCTTGTGTTATATTCACTCCGTCCGATGTCACCGAAGTCCAGGGGATGGGGCTCTCAGTGAACTTTTGATGTTGGCTGGGGGAGCAAGGGCAGGCCAGGATGAATGTGCACTGTCTTGGCTGCTGACTATGAGTGTGGGTGTGGTTTGCAAGGGGTAGGAATCTGATACTGGTTTTTACTCCAGGCAGAAATACTGGGGAGGAGGGTGTTGAACTGGTCAGCAGGTTGGACCAAACCCTGGAGTCCCTGTGCTGTGCTCTTGGGCAAGTTCCCCCAGCCCCTTCCACTCCCCTCCCCCCACGCCGTGCTTCAGTGCTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCCTGTGATGCCCCTGGCATCTCCGTGCTGGTAAGAGTGAGCTCCCTTCTCCCTGGCAGAATGTCCCCCTGAAAGCTGTCCCATGAGCCACCCAGCCCTCACTAAAGATTCTGAGTGGCTTGGTTGCTGAACAGAAAAGCTGGACACAGCTAATGGCTGGGTGAGCCTCCGGGACGCAAGGTTCAGGTTAGAATTCTCAAGTCTGAGGCCCACCCAGGAGGAGTGTGGGGCTGTGAGGGATGGGAGGTCAGATTCCACCCACTCCTCGATTCTTCTTCTTGGGTATAAAATTAATATCAAATGCACAGCCGGCCTTCTTTCCTTAGACTAACCTCAGTGGATCTTAGAGAATGGAGTGGGGGAGTTAGGGCAGCCAGGATCTCCCCCACCCCATAGGTGGCCCCCGAGTACCCGTGCCAGGGAGAATTCTGATGGGGAAGCCTCCGCGCTGAGCATGGATGCCAGGGCCCACTCCTCACAAACTGGCTGAGAATAGAAACAAGGGCAGAAGTTAAAAGGAAATTGGGCAAGACGGTGTGAGTGCCCGTGTGCTTTTGAGTGCTTCGCGAGGACAGTTTCCTGCAGGGGGAGGAAACAGCTGCCATCCCTGCTGTCGGGAACCACTATTTCCTACGAATGGGCCTCCTGGCTGCAGCCTTCCTAGAAGGAATTCGCTTTAGCGCCCAGACCAGCAGTTCCTGGGCCAGTGCTGCCCTCTCCTGGGCCCTTCTGGCCGTTTCTGGTGCTGAGGATGTGCGTTCCCGTATTTGACCAGCAGGGGGAGCCTGCGGGCCGAGACCAGTTTCCCACGCTTTGCCAGACTAACCCATCTGTCAGAGATCCGTTAGAACAAGCACAGGAACTCCGAAAGCAAGGAGGTTGGAAAGCCCGGTTCTCAGAAACACGCTGTGCCGGGCTTGTGTTCCAAAAGCTGCAGGGATTGTTTGCCGGCTGCCCCTGAGCTCAGGGACTCTCTGCCTTCTCAAGAATTCCTCTTCTCTACGCCAGGACCCTCAGTCAGGCAGCCCAGGGAGCACTTCCCTACCTTAAGATCCTTCTTGCTCCCCCCATCCCAGTACTGACCGGAAGTAAGCCAGAGTTCTGCCCCGGGGTGGGGTGACGTGGCTGCTGCTCCTGGTGCAAAGAAACCCACACTCCAGTTGTTGAGGGCAGAGGGGGTGACACCAAATGTATACTGGTTCCCAGGCCTCCACAGACTTGGCCCCAGTCTGGTCAGTGACCCCAGAGGACATTAGGGTGGGGCCTCCATCTGCCCTGTGCAGGAAGGGCTGCAATTGCTGCCTGCTATGCGAGAGGAAGGCGCCTTTCAGGGTGTGGGCTAGAAGCCTTGGGTGGTTTTGCCAGTGCCAATCTTGATAGACTCCTGAACCACCTTGTAATTGATGACAGTTCCACAGGAAGAGATATCCCCAGTCAGGACTAGCGTCTTCCTGTGCTCTGAGCATCTCTCACCTCTTGCCTGGTTTTTTAGTTTTCTGTACATTTTTTCCTAAAAGTTTGGATTTATTTTTCCTCCACTGTGATCCTAAGTTCTTAAAAAACTTGAGGGAAAAGGTTTAATTTATTAAAGGAGAGAAAGCTTTCCTTTGAAATGTAAACACTTTCAGGAGTAAAAATTCCTGAAAGGGAAAACACACTTCTCATGCCAGTAAACACCTCATTTATTTCTGGTATGCAGTTTGATTTGCACATGCACAATTGGAGAAGCTTTTCACATTTTTGCTTAGATTGGGTTTTTTACTTTGTGTTTGCTGTATGTTTGTAAGTATTAAGCGATCTTTTCTTTGGTGATATTTATTGTTTCTCTGAGGTGCCTTTTCACTTTTCTTTTGGGTTGGTTTTTGGAATCTGGTGTCAGTGTTTGGAATCGGGTTTTGTTGAAGGAAGCTAGCAGACTCCTCCAGCTTGGAGATAGATAGGACCTGTCCTTGTGAGACAGGTCCTAGGGCAGAGGGCAACCCAGGCTGGACGCCAGACATGCCCTCCAAGCTCCCCAGGTCGCAGCATATGTGCACAGATACCCCCATGCAGCCACGAGGGCCCCAAGAAGAGGGTTGACTTCCTCCAGACCAAGCTTCACCCTCCCAGGCTGCTCGGCTAGGTCTCTGGGTTTGTCTGGAGACGGATGGTTGACAGGTGCCACCCTGGGTGCTTGGTGGAGGGTGGCAAGGGCAGAGAACCAACCCTGTGTGAGGGGTTGCAGTGAAGGGAAGCAGGCCCCGCTGGGCTCGTTGGAAGCACTGGCCCCAAATCATTCTATCTCCCTATCAGGATGAAGGGGAAATAATATGCACCCCCTGTTTTTATTTCCTTGGCAAACATCAGCCTCCCAGCAAGCTCCCTTGGCGTCCCAGTGCAGCTCACTGGTAGTAAAACTGTGATTGTGAGCAGTTAGGCAGAGACTGTGCTGTTATGGGCGGGTTTGTGCTTTTTAGACCAGCCCAATCAGGCCACCCCCTCTCTGGGGTGGATTCCCTACTAGATATGTATATAATTGGGACATTGCCACCCTCGCCCACCCCCCCCACACACACCAATTCTTGATTTTAAAAAAGTTCTATTAACGACAGGCTGTGGTTGTGTTACTCTCCCAAGCCTGGAATATTTTATTTATTGAAGAATATTTTCATTTCCACAGTGGTTTTATTCTAATCCCGCCCATCCCCTAGGCTGCAGAGCATCTTCATGTGAAGAGACGGACAGATGTCAAGAGATTCAGGCTGCTCTAAGAAGGTGGGAGTTGTCTAAAGCAGAGGGTGGGTTCTTTTCCTTCTTGTTGGCTTCAACAACAAAAAAAAATGGAAACCCAAGTTTATATGGCAAAAGGCCAAATTAGCTGTCTAGTGTCAGATGCAGAAAAAAAAAAATTTTACCCTAGCTTTCTTAGCACTTAGGGGTTTTGTGAGGATTCAGTGTTTAGCAATGTCTGGCAAATAGTTAAGTCCTAGTAAATGTTAAATATTGTTGTTTTTCACATTTCATACAAGTTGAGGAAAAGAGCTGAGCTCACTTCCTATCATTGATTCCTGTAGGTACGGGAAGATACTCCAAGTTGATAGAATGTTGTAGGAATTACAGGTTTAAGATTCCCAGGTCCTGTGTCCACCCTGCTGGCTAAAATGGTACTGTGTCCCTGAATGCACTGACTGATTTGAAAATATGCCCGACTTCAGCCTCAAGTGGAACTGGGCTGCAAAATTAGTCAGCTTGACATAGAGTGGCCACATGCCAGATCCTACCCCACTGACATCTTCTGGACCCTTCCAGGGTGTGTGCAGAACTTTTTGAGCTGGGAATTAAAATAAATCCTCTGACAGACTGTTCCCTTAAAGTTACCCATCTTCCTCTGAAATGCAATAATAGAGGTGTGTTTTTTTTTTTATTTAAGAGAAAAGGAATGACCTCTTGAACGTACTCATTCCCCCAGGAAGTCCCTTTGCTGCCCCCTGCTGGCCAGGGTGGCTTCTCCAGTGTCCAGTCCAAGAGGATCAGATTCCCAGGCTGGTTAGTTGTTATGTTTCTATCAAATTAAAGGTTAGTTCCATGGAGAGACTGAGGGGTCTTCAGAACTCCAAGAGGCTGCTCCTAGCTTAGTGATGTTTTTCCAAATCACCCGAATGTCAGTTGGCTTTTTTTTTGGGGGGGGGGGGGTGGCGTGGTTGGTGTCAGCCTCTTACTTCCCTAAATAGGCTCAGTTTTTATCTCCTATTTTGGCGCTATTCTGGAAAGACTGCATTTGTGGAAAATGGAGGAATTTGTTGGTGTCTTTTTAAGATCCTTTGCATTCTCTTCAGCTGCATCAGCAGTCTTACATGTCTGTGGATGTAAGATTGGAGTGCACCTTCTTCCAAGCATTTCCTCGATTCTCCCCAGATCTTGTGGAGCCCTAGCCCCCTGCAGCTGGTGAGACAGGGCAGAGGGATGGAGGGCATCTGTGTGCTAATGCGGGGACCAGGGCCCTGTGTCTGGGGAGTCGGGGGGTGCAGCCCTAGGTGCTCAGACCACTTGCAGGAGGTCTCCCTGGGACAGCTGGACAGGAACCTAGCTTAGTCGGCCACCTCTGCCCACCTCTGAGATGGTGCAAACTTGGGAAGCATTTGTTCCCTGTCCTGCCCAGGTGTGAACAGGACAAATGGGAGTGGGACAACCGATGCCAAAGGAGATGGTGACATCTTTTCTGCCATAGTTGCTGTCGCGAGCTCGGTGTCTGTAAGCTAACGGCCATCCGCGTCTGTGTCTTCAGCCAGCTCCTGGTATGGCTGTTTTCTGCTGTTCCCCCGGGGTTAAGTCATGCAAGGTTCTGCCAGTGAGGTATTGCTGTCACATGTACTGTACCGGCGTAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAGAAAACTAGGGAGAACTTTATTTTTCAATAAACTTTTCTTGTGTGACAGGTGGACCTGATTTGTGGGGGGTGGGGGTGGGTGGGAGGTTCTGGGTGGGTACACGGGGTGCGATACAGCCACTCCCCCAGCACTGGCGGCCGCGG EMBV3_33386 ATACCCATTGCCAAGATCCTTCAGGACACCACCCAGAAGAGTGTGATAATGCTGCCGCTG Gene GeneID:614200|CNDP1:NM_001102275:32_cdna UTR3_Alt 2 NULL GeneID:614200 24 GENE CNDP1 MGC179482 carnosine dipeptidase 1 (metallopeptidase M20 family) EMBV3_00984 CTGCAGCCAGGACATAAGCTCTCATGATTCCGGGAACTGGCCTCAAGATGTGGGAAGAAA Gene BVT0102_017711 + 0 NULL GK000030.2:147944866-148319906 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246057 1 XLOC_150891 NonCoding TCONS_00246057 XLOC_150891 NonCoding NonCoding - X:148253052-148268907 - TSS184576 577 2 TCONS_00246057_1 51 0.674176776429809 2 0.963731550397376 6.00613808362165e-287 1.31607946632913e-70 0.000760743417492588 2.15156825631257e-40 4.71415727821402e-74 1.70793650612342e-05 5.81917053316805e-05 9.54873569086002e-05 3.44558487502186e-40 0 0 0 0 0 0.000323111996247834 2.01240879804098e-83 0 0 0.000812846457015346 0 1.56504839438269e-197 0 0 0 0.000595829652558249 0 8.65659572000263e-05 0 0 0 XR_228052.1 LOC100848532 PREDICTED: Bos taurus uncharacterized LOC100848532 (LOC100848532), 1e-29 134 71.97 0.474870017331023 0 noncoding 0 0 0 0 0.00506447265219179 0.971987044931311 0.0129983381820554 0.778360823269083 ACCTACGTTTACGACGTAGCTTTACGGCAGATCAGGCGTAGATGGCTAGAGCGGAGACCTTTGCTCAGTTTGCAGCTCTGCACCTCGGCCCTCCCGGGATTGCTCGCTGGACACGCTGTGTCCTCTGGGATTTTCCTGTGACCAGGACACCTCAGTTTCCTCCCCGAGGCTTGCAGCTGAGGAGGTGCAGAAGTTAATGACGTGATGACCAGGCTGCAGCCAGGACATAAGCTCTCATGATTCCGGGAACTGGCCTCAAGATGTGGGAAGAAACCGACCCTGGAAGTGAAGATCAGCTGCAGTTGAAACAACCAAGGATCAGACCACTGCTGACCAGCTTCAAGATAACTTGTCAGAGCTGACTGTGTGTTTCAAGAAGCCTCCTCCCTTTGTCTATAAAAGCTCTTAGCCCCCAATTGTCAGGGGCAGGTAGTCAGCCTTTGTACAGGCTCCCGCCCCCACCCCTGCCCCACAAGTGCCAGCAACAAAATAAAGCAAACTTTGCTGTCCAGCAACCTGGCTTCCTTATTGCCTTTTGGGCTGCAAGCAGACGGACCCGGCTTTTGGTAACAGGAGC TCONS_00248732 r 3' 51000 TCONS_00248732 r 3' 66854 EMBV3_10851 ACATGGTTAACAGTGCTTCGCTCCTGCGCCTGGGGTGATGGCTTGGAGAATTAGAAGTCA Gene GeneID:783538|ARID5B:XM_002698842:35_cdna Constitutive 0 NULL GeneID:783538 28 GENE ARID5B NULL AT rich interactive domain 5B (MRF1-like) EMBV3_38601 TTCTGGATGGTGGGGGAGCTGGGGGCAAGGGGGAGCTAAAGACAAGAAAACAGAGATTTA Gene GeneID:506578|ELL:XM_002688531:121_cdna Constitutive 0 NULL GeneID:506578 7 GENE ELL NULL elongation factor RNA polymerase II EMBV3_33553 GCAACTACAACAGCAACAGCAATCCTCTGGAATCAGGTCCAAAAAGGCAGACCTTGGCAG Gene BVT0102_277888 + 1 EMBV3_24997 GK000010.2:65971533-66751292 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24920 CAGGGGTCCAAGACTCCAGCAGAAGATGTTTTTCATTGACAGAGGGGTGATGGGGAAAAC Gene GeneID:529618|GRIA1:XM_002689318:29_cdna UTR3_Alt 2 NULL GeneID:529618 7 GENE GRIA1 NULL glutamate receptor, ionotropic, AMPA 1 EMBV3_23514 CCTGTGTAGTTACCAAGCGAGTAAGAAATGTAATAACAAAACTGACGTGGGAGGAAGGGG Gene GeneID:613448|AK5:NM_001083757:89_cdna UTR3_Alt 2 NULL GeneID:613448 3 GENE AK5 MGC139240 adenylate kinase 5 EMBV3_35328 CCTCAGACGAGGATGAACGGGGGGAAATGGCAGATTTTGGTGCTATGGGCTGTGTAGATA Gene GeneID:613522|KCMF1:NM_001076275:140_cdna Constitutive 0 NULL GeneID:613522 11 GENE KCMF1 MGC139067 potassium channel modulatory factor 1 EMBV3_38315 GCAGAGTCGTGTGTTGTCTCTCCCTGGCCCTGTTTCGGCATGAATCAAACCTTTCGTAGA Gene GeneID:614893|CDCA7:NM_001037488:46_cdna UTR3_Alt 2 NULL GeneID:614893 2 GENE CDCA7 MGC128588 cell division cycle associated 7 EMBV3_10437 AAAGGGTTAAGGCCGGGCAGGAAAGCCCCTGGGGGGAGCTACCACTAAAGGCTGCAATCT Gene BVV0102_437868 + 0 NULL GK000010.2:86039768-86073365 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41387 CAGCCTCTGAGCAGGTTTCTCTTTGGGTAACCTTGTGTTCTTACAATCTATTCTCAGCAG Gene BVT0101_003298 + 1 EMBV3_21766 GK000011.2:69702230-70321847 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21552 TCTTAATAACATGGTGATGTATTTTGCAAGTGTCCTGTGGGGTGGTGGTCCCCTGGCTGG Gene GeneID:788626|LOC788626:XM_002689040:116_cdna Constitutive 0 NULL GeneID:788626 7 GENE LOC788626 NULL similar to hCG1811267 EMBV3_30368 ATTTAATCCTGGCTGGGCTTAGAGCTTGTGCTTTCATAGTTCGTGGTAAGCGGCGGCTCA Gene GeneID:511119|GJC1:NM_001046076:236_cdna Constitutive 0 NULL GeneID:511119 19 GENE GJC1 GJA7 GJD3 MGC138040 gap junction protein, gamma 1, 45kDa EMBV3_42138 CAACCACTGGACTCTGGGTAAATGGAGACCCACCTCTACAGAAAGAACTAATGGATGCTA Gene GeneID:534262|USP38:NM_001102167:41_cdna UTR3_Alt 2 NULL GeneID:534262 17 GENE USP38 MGC139596 ubiquitin specific peptidase 38 EMBV3_17450 AAAACGATTGAACACCAGATTGCAATTCAGTATCTTCAGATGAAATGGCCACTGCTTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33921 GGTGTGTAAAACTTGCGACTCGTCTCAACAACTCAACTACCCAGATGCTGCAGCTTCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18347 ATCACAAATCCACATCTCACTTCCGCACAGGTAGATGATCATGATGGGGAAGGTGATGTG Variant GeneID:616182|SMAP:NM_001035474:234_cdna 331^440 3 EMBV3_36839 GeneID:616182 15 GENE SMAP MGC128249 small acidic protein EMBV3_01629 GCGGTGCCTGCCCTGAAGGACCCCGGTCAGGTTCTTGGCCTGGAGTTGGGGATGAAGAGA Variant GeneID:509810|LOC509810:NM_001077894:28_cdna 224^350 1 EMBV3_15612 GeneID:509810 18 GENE LOC509810 MGC140413 zinc finger protein LOC509810 EMBV3_35272 TCAAGAACTACGAGATCATCTTCTACCTGGCAGGCTCCGAGGTGGCCCTGGCGGGGATCT Gene GeneID:540734|SLC16A8:XM_002687932:163_cdna Constitutive 0 NULL GeneID:540734 5 GENE SLC16A8 MCT3 solute carrier family 16, member 8 (monocarboxylic acid transporter 3) EMBV3_27807 GGAGAAAAGGCTGCCACGTCATCCCAGAGAAAGTTCCAGATTCTGAGTCATCTCCACAAG Gene GeneID:338036|P2RX4:NM_001034049:33_cdna Constitutive 0 NULL GeneID:338036 17 GENE P2RX4 MGC143034 purinergic receptor P2X, ligand-gated ion channel, 4 EMBV3_23895 TCCTTTGAAGACCTAACGGTGAAGACTGTGTGCCGGCTACCAATGATGAAGGAAATGCTG Gene GeneID:527577|TRIM4:XM_002698138:519_cdna Constitutive 0 NULL GeneID:527577 25 GENE TRIM4 NULL tripartite motif-containing 4 EMBV3_39897 TTTTCCACACTATGTGTGTTGTTTCCATAGCTCTTCACTTCCTCCAGAAGCCTCCTTACA Gene GeneID:613877|MEIS1:NM_001083507:71_cdna Constitutive 2 NULL GeneID:613877 11 GENE MEIS1 MGC138090 Meis homeobox 1 EMBV3_14708 CTTGCCTGTTGCTGCCTGGAATATATATCGAAATACACAACCGAGGGCAGCTGAAGTCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41566 GCTCAACGTGCATATGGATTCAATCCCACACCATCGATCATAGCCCCAACTATCAGCACT Gene GeneID:783831|SELT:NM_001103103:74_cdna UTR3_Alt 2 NULL GeneID:783831 1 GENE SELT MGC151598 selenoprotein T EMBV3_10186 GAATACTAGAGTGAGTTGCCATTTCCTTCTCCAGAGGATCTTCCCGACCCAGGGATTAAA Gene GeneID:508710|MPP3:NM_001103235:218_cdna Constitutive 3 NULL GeneID:508710 19 GENE MPP3 MGC157331 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) EMBV3_30234 TAATTTCATCATTCATATGTATTTATATTTATAGATCACAAGAAAGGGGTCTTGAATTTA Gene GeneID:768227|DNAJC24:NM_001078102:71_cdna Constitutive 2 NULL GeneID:768227 15 GENE DNAJC24 DPH4 MGC142938 ZCSL3 DnaJ (Hsp40) homolog, subfamily C, member 24 EMBV3_13050 CACATGTGTGTTCACATGCTTCAGGAATGTTTAGGGTGATTTTGGTACCTGAATGTAAGG Gene GeneID:525136|WDR51B:NM_001099031:38_cdna UTR3_Alt 4 NULL GeneID:525136 5 GENE WDR51B MGC139093 WD repeat domain 51B EMBV3_23055 CCCCAAAATAGTACCAGGTGGCCCAAAGATTGAACATCCAGAGAGAAAGCATGAGCCAGC Gene GeneID:515555|TIMM22:NM_001034498:121_cdna Constitutive 0 NULL GeneID:515555 19 GENE TIMM22 NULL translocase of inner mitochondrial membrane 22 homolog (yeast) EMBV3_13289 TTTTTCCCCTTCCCACAGACAAGTCAGCTGAGCAACCCTGCACATGGTGAGACTCAAGAA Gene BVV0102_383907 - 1 EMBV3_38252 GK000014.2:47461082-47779595 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01808 AGGAAGAGATGCAGAAAGAATTTGGGGGAATCCATCATTGTGCCTCATGCCAATCGGATG Gene GeneID:528593|CD5L:NM_001102119:5_cdna Constitutive 0 NULL GeneID:528593 3 GENE CD5L MGC152031 CD5 molecule-like EMBV3_14443 GAGGTGCACTCAGGATCTGAACCACGATTATATGTACTGGTACCGACAAGACCTGGGACG Gene GeneID:617284|LOC617284:XM_002687094:354_cdna Constitutive 0 NULL GeneID:617284 4 GENE LOC617284 NULL similar to T-cell receptor beta chain V region C5 EMBV3_27841 AGCATGATCTGACGGGGAACACCACGGTCAGTGCCACCCTCACAGGTCTGTTTGTACTGA Gene GeneID:513482|DHRSX:XM_002683875:2_cdna Constitutive 0 NULL GeneID:513482 X GENE DHRSX MGC137901 dehydrogenase/reductase (SDR family) X-linked EMBV3_28542 GATCGCCGGCTCCGTGGAGGCGGTGGCGAGACGCTACTACAAGGAGACCTCTGGCCTGAT Variant GeneID:534183|LHPP:NM_001080912:48_cdna 182^523 3 EMBV3_15247 GeneID:534183 26 GENE LHPP NULL phospholysine phosphohistidine inorganic pyrophosphate phosphatase EMBV3_32032 CTCCGGTGGACGCTTGAGCCTGCTGTGTAGGAAATGAGGCGTCGCCGAATAGAAGTTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00213 GGTGCTGTCCTTCCACCTGGATTTGGGCCCCTCCATGCTGGACGCGGTGCTGGGCGTCAT Gene GeneID:618745|CDC42EP5:XM_002695391:253_cdna Constitutive 0 NULL GeneID:618745 18 GENE CDC42EP5 NULL CDC42 effector protein (Rho GTPase binding) 5 EMBV3_08173 GAGTCTTATGGGGCTGAGGCCTTCACCTGTGAAATCTGATGCTACCTTCAGGCAGATGGT Gene BVV0102_361615 + 0 NULL GK000010.2:33679719-33950023 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31016 GGCTTTATCTGGGGGATAAGGAACTGAACATCGTTAGCTACTCCCTGCTGGTTTCAGTGC Gene GeneID:281706|COPB2:NM_174281:3_cdna Constitutive 1 NULL GeneID:281706 1 GENE COPB2 NULL coatomer protein complex, subunit beta 2 (beta prime) EMBV3_10071 TCCAGGGCCAAAGGGTCACTCTCACCAATACAAAGGGTACAACAGGTGGGAGGGTAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43678 ACCGAATGGCAGCATCGGCACACTGCTCAATGTAGGTTTATTTTTTCCCTTCTTCTACCC Gene GeneID:100295410|LOC100295410:XM_002698751:15_cdna Constitutive 0 NULL GeneID:100295410 27 GENE LOC100295410 NULL similar to retinoic acid receptor, beta EMBV3_34705 CTCGCTCACGGTCCTTCAGTGGCCTCATTAAGCGGAAGGTCCTGGGAAATCAGATGATGT Gene GeneID:526945|ARHGAP19:XM_002698482:542_cdna Constitutive 0 NULL GeneID:526945 26 GENE ARHGAP19 NULL Rho GTPase activating protein 19 EMBV3_26772 GTGTAAGCTCTTGGAGTAGAGAGAAGTCATTCTTGTAGGCAGGCCTTTGTTTAACCCATG Gene BVV0102_236063 + 1 EMBV3_16483 GK000006.2:90996783-91054195 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17053 GGCATGTTTGTTAATTCTAGCTTTTTGGTTTAATATCCTGTAAGGCACGTGAGTGTACAC Gene GeneID:534001|HNRNPH2:NM_001076008:26_cdna Constitutive 0 NULL GeneID:534001 X GENE HNRNPH2 HNRPH2 heterogeneous nuclear ribonucleoprotein H2 (H') EMBV3_17916 TTAAAAATTAGCCTAAGATTATACTTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCG Gene GeneID:536628|ACSL4:XM_002699866:73_cdna Constitutive 0 NULL GeneID:536628 X GENE ACSL4 FACL4 acyl-CoA synthetase long-chain family member 4 EMBV3_25004 AACAAGTCAACTGAATTGCTGCCTGTGGAGGCGAGGAGTTGTTTTTGGTCTCTGGAGTGC Variant GeneID:506910|SLC37A3:NM_001075284:589_cdna 369^691 2 EMBV3_19076 GeneID:506910 4 GENE SLC37A3 MGC137963 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 EMBV3_28176 TGGCTGAGACTTTCCAAAATAATGACACCAAACCACAGGAATCTCAAAAAAGCACCAAGC Gene BVT0102_016564 + 0 NULL GK000017.2:45304228-45375499 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34693 GTGAAGAGTGGGAGGCAGGATGCTATAGGGGTTCAGCTTGTGGACTTCAGACTCAGATTA Gene BVT0102_015556 + 1 EMBV3_17535 GK000010.2:36478925-36490426 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33794 TGGTTTTGATCCCTGCCTCCTGTACAATGTCACGAACTCCATCCATAGTCCTTCAGCGAC Gene BVT0102_408016 + 0 NULL GK000004.2:40560785-40581476 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40710 CACGTGCTCAAACTCCACCTACAGAACAACCATCCTGACGACGTCTTCCTCTTCCCAAAA Gene GeneID:281992|PPARA:NM_001034036:47_cdna Constitutive 0 NULL GeneID:281992 5 GENE PPARA PPARalpha peroxisome proliferator-activated receptor alpha EMBV3_40696 GAGCCCCCGCAGCTCAGTCCTCTTTATAGCGTGAGCTTATGTGTCTGTGAGATGTTTCCT Gene BVV0102_162195 + 0 NULL GK000018.2:2626608-2662462 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085213 TCONS_00085214 TCONS_00085216 TCONS_00085217 TCONS_00085215 TCONS_00085218 TCONS_00085212 1 XLOC_051819 Coding TCONS_00085217 XLOC_051819 Coding Coding BCNT2 18:2661783-2838943 j TSS63695 3797 2 TCONS_00085217_5 329 0.249407426915986 15 0.978651945427554 0.00779894599995915 0.00165801663890359 0.00390980776122068 0.00270524936489926 0.00280475625419925 0.00283985269072994 0.00246314366373103 0.00263984913447247 0.00219841806722166 0.000305268477577354 4.43929195938661e-05 3.28979589468589e-05 0.000548651991977367 2.65542966751618e-09 0.000360373031844051 0.00157450115459733 5.90046559706345e-05 4.37247562232022e-05 0.00484483053502541 0.00453152641199049 0.000869903008158925 0.00016844687014913 0.000281100264078788 0.000103191901197699 0.00417627116854316 0.00456595676978813 0.00528500770859421 7.1832343677528e-05 0.000853505675196425 0.00014926901982601 NM_174800.2 CFDP2 Bos taurus craniofacial development protein 2 (CFDP2), mRNA. 0.0 3002 99.76 0.440611008691072 NM_006324.2 CFDP1 Homo sapiens craniofacial development protein 1 (CFDP1), mRNA. 4e-171 607 88.58 0.122728469844614 TCONS_00085217_5 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 0.0 686 99.69 0.987841945288754 2 coding 1 1 1 1 0.522310017133859 0.0862974841260836 -0.0101142575927075 0.826699669393567 CCGCCGACCGCCATAAGAGCGTCAGGTCCGCGGCTTTGGCCCGGAAGTGGTGGTTCTCGACCTAGCGCCGTTTCTGCGTGTGCGCACGCGCCGCCGGAGCCGCCGCCATCCCCGTCGCCTCTGCGCACTCCGCGCTTCTACCGTCTCTCCCTAGAGCTTTGCCGTTGGAGGCGGTTGCTGCGGCACCGTAGGCCCCGCGCGGCAGCAGTATGGAGGAGTTTAAATCCGAGGATTTCTCCGTGTCGAAGGAGGACGAGGACTACGCGCCGTCGGGTGGAGAATGTCATGAAGATGCTGTAAATGAATTAGTGAAGGAAGGTGAAATGGGTGCTGAAGAGGAGACACAGAAAACCAAAGGGACAAAAAGAAAGGCTGAGAGCATTCTGGCCAGGAAGAGAAAACACAGTGGCCTCTCACCACAACACGAGGAAGAGGAGGATGCCAACAGGGAATCTGGAGGGAGTATTAGTGAGAAGGAAGATGTAGCTGCAGAGCAGGAAAAAGGCGCCGAGTCAGAGGATGCCAGGGAAGAGGAGGAGGAGGAAATGTTGGCCAGCTCCATCGGTGATGTAGAACCAAAATCAGAAGTGCCTCCGAGTACACAAGTTAAAACAGGAGAGGAGAATAAAGAGATGGCTTCAAGTAAAGTGGTCAAAACAGAAGAACAAGAGAAACCTAAAGAACCAGAAGAAGTTAAAGTCACCAAGGTGTTTGATATTGCTGGTGAAAAAGTCAGGTGGAGAATGTCATGAAGATGATATAAATGAATTAGTGAAGGAAGATGAAGTGGATGGTGAAGAGGAGACACAGAAAACCAAAGGGACAAAAAGAAAGGCTGAGAGCATTCTGGCCAGGAAGAGAAAACAAGGTCGCCTCTCACTGGACCAAGAGGAGGAGGAGGATGCCAGCAGGGAATCTGGAGGGAGGATTATTGAGAAGGAAGATGCAGCTGCAGAGCAGGAAAAAGGCGCCGAGTCAGAGGATGCCAGGCAAGAGGAGGCTGACGTGCTGGCCAGCTCCGTCAGTGACGCAGAACCAAAATCAGAACTGCCTCCGAGTACACAAACCAAAACAGGAGAGGAGACTGAAGAGACAAGTTCAAGTAATTTGGTCAAAGTGGAAGAGCTAGAGAAACCTAAAAAAGCAGAAGAAGTTAAACTCACCAAATCACCTCTTGCTGGTGAAGAAGTCAGGTTTCTTACACAGCAGGGAAGGCTCTCTGGCAGGACATCGGAAGATGAGCCCCGCAGGTCCGAAGGTGTTCAACATGCTACTGGAGAAGAGCGGAGGGCCGATACTAATACCTCCAGTAAGAATGAAGCGGCTGGGCCAAAGTGGAAAGGACAGTCAGCTGTCGATGTGTCTGGTGACGAAAGTAAACTCCGATGCTGTAAAGAAGAATACTGCATAGGAACCTGGAATGTTAGATCTATGAATCCTGGTAAATTGGATGTGGTGAAGCAGGAGATGGAAAGAATAAACATCGACATCTTAGGAATCAGTGAACTAAAATGGACAGGAATGGGCGAATTGAATTCAGATGACCATTATATCTATTACTGTGGGCAACAATCCCTTAGAAGAAATGGAGTCGCTCTCATAGTTAACAAAAGAGTCCGAAATGCAATAATTGGGTGCAATCTGAAAAACGACAGGATGATTTCAGTTCGTTTCCAAGGCAAACCATTCAACCTCACAGTAATCCAAGTCTATGCCCCAACTCCTTATGCTGAAGAAGGTGAAGTTTACCGGTTCTATGAAGACCTACAACACCTTCTGGAAATAACACCGAAAATAGATGTCCTTTTCATCATAGGGGATTGGAATGCAAAAGTGGGAAGTCAAGAGATACCTGGAATAACAGGCAGGTTTGGCCTTGGAATGCAAAATGAAGCAGGGCGAAGGCTAATCGAGTTTTGTCACCACAACAGGCTGGTCATAACAAACACCCTTTTCCAACAACCTAGTAGACGTCTCTACACATGGACATCACCAGATGGTCGATACCGAGATCAGATTGATTATATTATTTGTCGCCAAAGATGGAGAAGCTCTGTACAGTCAGCAAAAACAAGACCTGGAGCTGACTGTGGCTCAGATCATAAGCTCCTTATTGCAAAGTTCAGGCTTAAGTTGAAGATAATACCAAAAACGACTCGGCCATTCAGAGTGACTAATGAAGAGGATGCCACAAATGAAGAAGCAAAATCCGTCTTAAAGCAGAATGAGAAAGAAAAACCTGAGGCTAACGTTCCTTCAACTGTGTCCTCAGTTCCTGGTGGGTCAGGCATGACTAAGGAAGTGGGTGAAACATCTCAAGAAGCGAAATCTGTGTTCAAGCAAGATGAGAAAGACAAACCTCAAGCTAATGTCCCCTCAGCGGTGCCATCACTTCCTGCTGGGTCAGGGTGGAGAGTATAGTGAAGATGATATAAATGAATTAGTGAAGGAAGATGAAGTGGATGGTGAAGAGGAGACACAGAAAACCAAAGGGACAAAAAGAAAGGCTGAGAGCGTTCTGGCCAGGAAGAGAAAACAAGGTGGCCTCTCACTAGAAGAGGATGAAGAGGATGCCAACGAGGAATCCGGAGGAAGTAGTAGTGAGGAGGAAGATGCAGCAACAGAGCAGCAAAAAGGTGTTGAGTCAGAGGATGCCAGGAAAAAGAAGGAGGATGAACTGTGGGCCAGCTTCCTGAATGATGTAGGCCCGAAATCAAAAGTGCCCCCAAGTACACACGTTAAAACAGGAGAGGAGACTGAAGAGACAAGTTCAAGTCATTTGGTCAAAGCAGAAAGGCTAGAGAAACCTAAAGAAACAGAAAAAGTTAAAATTACAAAGGTGTTTGATTTTGCTGGTGAAGAAGTCAGGTTAAAAAGATCAAGTGGCATGAGCAGCCTTTTGGGGAAAATCGGAGCCAAGAAGCAGAAGATGAGCACCCTAGAGAAGTCCAAGCTGGACTGGGAGAGCTTCAAAGAGGAAGAGGGCATTGGCGAAGAGCTAGCCATCCACAACCGAGGGAAGGAGGGGTACATCGAACGAAAAGCTTTTCTAGACCGAGTGGATCACAGGCAGTTTGAAATCGAGCGAGATCTCAGGCTGAGCAAAATGAAACCCTGATGTGATGGGGAGCCCCCGCAGCTCAGTCCTCTTTATAGCGTGAGCTTATGTGTCTGTGAGATGTTTCCTGTGCTTCTCATCGACTGGCTCCCAGCAAGGTCCTTTTTTCTACACTGAATTTCTGTCTTTGTATCTTGATCTCACATGATTTCATTTGTTTTACTTTTAATAGTTTGTCCTTTCAAAAATAAAGATTAAAAAAAAAAGTACAAGTTGATCCTGTGAGAGGCTGGTGAGGATGACGCCACTTGCCTTCCCTTTGTTCTGCTGCGAAGTCCACGAGGCCAAGCCCGTTCCTCGCAGGCCTGTCTCGGCCGCTGTGGAGAAGAGAGCGCGCGGCCCGCTCACCGTGGGCCCGAGAGCAGGGGCTGAGACGAGGCTCGCCATGCTGGCATGACGCCAGGCCCCGCGCTTCTCTCCTGACTGGACTCCTCCATCCGGATACAATGTAAAGATGTAAGGCTGAAAAATAAGGATATGCCATCACTGAATTAGAGATCTTTCTTTTCCTTCAGCCTTTCTCCTCTCCTCAAAGTTAAAGTCAACTTCCCATATTTCTCATCTCAATAATTCTTTGATTGGGGGTTTGTCAAAGAAAACTACAAAGGACTCTTTTTTTTTAACTCTTTAGAAGATTTAAATTCCAAACTTCATATTAATAAAGCAGTAAACCTCACAA EMBV3_27237 TTTCTCGCCTGAGCAGGGGAACAAGGATGCCAGTGGGTCAAACTAACTCTCTGAATCCCT Gene GeneID:510668|CCR7:NM_001024930:106_cdna Constitutive 0 NULL GeneID:510668 19 GENE CCR7 NULL chemokine (C-C motif) receptor 7 EMBV3_33497 GGACACCTTCTTCCAAATTGTCATTTATCTTGGTGAGACCATAGCCCAGTGGCGGAAGGC Gene GeneID:535071|SEC23B:NM_001034626:64_cdna Constitutive 0 NULL GeneID:535071 13 GENE SEC23B MGC127059 Sec23 homolog B (S. cerevisiae) EMBV3_29032 TGATCGAAGAACAACTTGATGTCCAAGATGAGGATGGAGGAGCTCTGGGCCATACAGGAG Gene GeneID:530241|SLC26A4:XM_002686803:165_cdna Constitutive 0 NULL GeneID:530241 4 GENE SLC26A4 NULL solute carrier family 26, member 4 EMBV3_20248 GTTTGGCCAATTGACTTTCTATAAATCCATTTTCCTACCTCTAAAATGAGGAAGGACACG Gene BVV0102_020015 + 0 NULL GK000024.2:14628176-14995735 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36195 CAGCTACGGCCAGGGATTAACACCAGAGTGCAGGGGAGATTAACCACCTCCCTTCAAATA Gene GeneID:540997|CNTNAP1:XM_002695997:386_cdna Constitutive 0 NULL GeneID:540997 19 GENE CNTNAP1 NULL contactin associated protein 1 EMBV3_13896 CTACACCGGCGAGCGGCTGCGATCACTCCAGCTTGTACCTCGCCACGGTGGCAGATGACA Variant GeneID:508388|WSB2:NM_001075357:90_cdna 892^971 3 EMBV3_31825 GeneID:508388 17 GENE WSB2 NULL WD repeat and SOCS box-containing 2 EMBV3_16245 CCAGTACTATGGCTACCTATGGAGTGAGGTATACTCTGCTGACATGTTCCACACGCGCTT Gene GeneID:510889|THOP1:NM_001033991:17_cdna Constitutive 0 NULL GeneID:510889 7 GENE THOP1 NULL thimet oligopeptidase 1 EMBV3_06763 CCCGTGCTGGAGTCAAGGGCAAGGAACATCCGTCTAACAAGTCCAGGGCATAATTTGCAC Gene GeneID:281794|GNAT1:NM_181022:37_cdna Constitutive 0 NULL GeneID:281794 22 GENE GNAT1 NULL guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 EMBV3_10839 CTAGTATGGCTGCGGATCCCTGGCCTGGGTTTTTCTATCAGATGATCCATCGTAATAATG Variant GeneID:507308|PHOSPHO2:NM_001045965:211_cdna 90^206 2 EMBV3_23751 GeneID:507308 2 GENE PHOSPHO2 MGC137346 phosphatase, orphan 2 EMBV3_05174 ATACCATGCAATTTGTACAGGTTAGAGACCCTTGGTGTTGTAGCAGTCAGGGTTCTTCCC Gene BVV0101_027947 + 0 NULL GK000011.2:19846494-20108544 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027123 TCONS_00027126 TCONS_00027128 TCONS_00027124 TCONS_00027127 TCONS_00027125 1 XLOC_015189 Coding TCONS_00027126 XLOC_015189 Coding Coding CDC42EP3 11:20106629-20133740 j TSS19308 3992 1 TCONS_00027126_3 254 2 0.852821836960531 2.61755291822764e-07 1.64398426776681e-07 5.53145235074695e-08 0.000122340900605164 3.56814672726577e-12 6.89608669014878e-12 7.36521022010854e-11 0.000257701117861515 1.50838372627089e-07 9.14043187446181e-12 1.24665016800828e-10 1.96088663999098e-06 4.38408977719915e-06 3.14202047288323e-09 2.34224826643896e-09 6.90786539356659e-07 1.196098861769e-11 0.000603522210559254 0.000631687411434974 0.000252620192961319 0.000208533723247526 2.10716899187636e-10 2.82611928950811e-08 4.42164238210272e-07 2.43260531722024e-06 0.000336895658520702 0.000102398381362149 5.66372769050512e-12 3.21440923841594e-10 3.12034453217189e-12 NM_001046444.1 CDC42EP3 Bos taurus CDC42 effector protein (Rho GTPase binding) 3 (CDC42EP3), mRNA. 0.0 3615 99.90 0.503006012024048 NM_001270438.1 CDC42EP3 Homo sapiens CDC42 effector protein (Rho GTPase binding) 3 (CDC42EP3), transcript variant 4, mRNA. 0.0 2387 79.84 0.660320641282565 TCONS_00027126_3 sp|Q9UKI2|BORG2_HUMAN BORG2_HUMAN Cdc42 effector protein 3; 3e-155 437 94.09 0.996062992125984 2 coding 0 0 0 0 -1.55148504638474 0.0893855642535134 -0.126116412458447 0.0401611044502255 GCCCGAAGTGGGGGCGAGCCTAGAGACCCCGGCCTTCGGCGCCTTCACGCCGTCTCGGAGCGGATAATACTGTTTCTCCCTGCTGTGGAAGAGGTTGAGGATGTGAGTGGCTCTCCAGAAAGGCCTGCTTGCGTCCAGGAAGGCCTCTTAGCTTTCTTGTTTCAGAGCCACTTCTGGAGCTATTTGAGAAAAATAATGTGACAGTACCTATCCAAAAGGATATTGGGAAACTTGTAACATCGGTGAAGAAAGTGGCCCTCTTTCCCTTTTGCAAAATCGACATTCTCAAACTCCAAAATGCCAGCCAAAACCCCGATTTACCTGAAAGCTGCCAATAACAAGAAAGGAAAGAAATTTAAACTGAGGGACATCTTGTCTCCCGATATGATAAGTCCGCCCCTCGGAGACTTCCGCCACACCATTCACATCGGCAAGGAGGGCCAGCACGACGTCTTCGGAGACATTTCCTTTCTCCAAGGCAACTATGAGCTTCTACCCGGAAACCAGGAGAAAGCACACATGGGCCAGTTCCCTGGGCATAATGAGTTCTTCCGGGCCAACAGCACCTCCGACTCCATGTTCACAGAAACGCCCTCGCCGGTGCTCAAAAACGCCATCTCTCTCCCGACCATCGGAGGGTCCCAAGCCCTCATGTTGCCCTTGTTGTCCCCGGTGACATTCAGTTCCAAGCAGGAGTCCTTTGGGCCGGGAAAGCTGCCCCGGCTTAGCTGTGAGCCGGTCGTGGAGGAGAAGGTTCCAGAGAAAAGCAGTGTGTTGGAGAACGGGACGGTCCACCAGGCGGACGTCTCATGGGGGTCGAGCGGGTCTGCATCGCAGTCCAGCCAGGGGCGGGACAGCCACTCCTCCAGCCTGTCCGAACAGTACCCCGACTGGGCCGCGGAGGACATGTTTGACCATCCCGCCCCTTGCGAGCTCGTCAAGGAAAAGACTAAATCAGAGGAGTCCCTCTCTGACCTCACGGGTTCCCTCCTGTCCCTGCAGCTTGATCTCGGGCCCTCCTTTCTGGATGAGGTGCTGAATGTCATGGATAAAAATAAGTAACAGGACACGGCCAGGCCCTTTTCCTTTGGTGTAAAAGATACCAACAGACAGAATGGAAGAAAACGAACCACAAAGAGGAGAGCCTCACTGGCTATACTTGCTGTCATGTGATGCGTTTTCTAAAATAACCTTCCTACAAAATATTTTTTTACCTGGTATACCCTGTTTGCAAAAACAATATAAAGGGGGAAAAAAAAAAAAACTTGTCCTGGCAAAAGAGAGGAAGTGAGTCAGAACCCATTTTCAGTGGGCCATGCTGATGTATAGCTCACATTTTTTGTTTCCAGACACGTGAGAAATCTGGCTTGGCCAGGACTGGCATTACTTAGCTATGAAGGGCTGTGCCAGTCACATTAAGGACCTTTACAGAACTCTGGCATTTTCTGAGCAAAAGGAAGTCAAATTTATTTAACACCCACGCCTTTTTTTTCTAGACTCTTTTCTATATTACATGGTTTGGGCTCACCATAGCAAACAAATTCTTAAGTGTTAAAACTTTTCTCATTTCCACATTTGAACAACATTATGGGTTTTGGGGATTTGCTTGTAGCTCTTATATATCCCTATATGTTATATCTATATTGCGAAATCTTGACTGTCAGCTACATGTTGGTAAGACACAAGCGAAGTATTACTGTAACTAAGTTATTTTTAAAGTTAAAATATATTTTTATGTGCCTTTGGCTTTTTATTGCAAAGTCTACATTTTATAGATAATACATCAAATGTGGTCATTTGACTTTTTCCACTGGGTTCCATTGTAAGCTGTGTATGTGTATGTTTGGAAAAGTGTACTCATACTTAGCTTTATTATTATTTTTTCTTCATCTATTATACTTTTCACAGCAGCCAACAGTGGATTGTAAAGTGTAAAGGCACAGGTTACTCACAATGCTTCTGCAGAGACTGTGGGCTATACCACCTAATGTTCTTTGGAAATATGGGTATTTTAGTGCAGTACATACTTGCATTACATAGGTACTTCATACAACACAATAAAGAGTAAATGTTAAAATCAGCTTGCTTGGTTATAGTACTAAACAAAAACATAAGACAAGAGTTATATTTTCTTGACATCCAGGGCTAGAAAAAATTGCTTCTGTAAAGTGTACACAAGGCTTTAAATGAGGTAAGAGGTGTATTCCACTCACTCAGTAATTTTGATTATTTTGATTATTATCCAGAAACAATGCTCTTCAATTTTAGGAAAACTGAACATGTGAGATGATTTTTTTTTTTTTTAAGACAACACTGACGCCAACCTCTCAAAAAGCTCATTTCCATGAATCTCCAACCTAAATTTAACACAGTAAACTCATGCAGGCCTAACCCTGTCCCTATCAGATGGATGTCTCCTTTCTGTGGGTGCCATACAGACAAGATTAAGGAGGCCAAAAAGAGGGCAGTAGAAAGCACTTGGCCCCGAAAGAGACAGAGATGCTCTGAGAATGTTGATTAAGGAAACAGGAACAGGAAATGTACACATCGATTCCTGTCCTTGTCAACCACCCGTTCCCCCTCCAAGACAAATGCTCACACACAAAAACTTTCATTTCTCCTTGAAATGTATCCCTGAAATAACTACTGCTTCCAAACCCTTCAGCGATTCTCTCACCACGTCTGAAATTGTTGCAATTCTGTCATCTGGTTAGCTGAAATAATCTTTGAGTTAGAGCTGAAACACAGTAGAAGAGGCAACAAGCCCCCCCAGTGCACTGAGTTCTTGCCTTAATTTCCCTGCTGTGTTTCTACCTCACAATTTTCCAGTGTTCTTTTTCTGCTAGACCACACGCACTCATGGTTCAAGTTCCACACAGAGACTTCCCAGCCTCTTCTAAATCTTATGCATGAGCAAGAGTCCAATATATCTCATCATTTTTAAGCAGACTCAACACATCTTAATTTTTTTACTGATCATATTCTCATTTTACTCTTCATCTGCAGATTAAACTGTTAGGTGAAATGGCAAGGAATGTCTTTGCATTTCCTCTGCTCCCTCTGTTTCAGGTGGAGAGGACAACTCTGCCGGAGTTGGGTTTCTGTACAGAATCTAAGCAATAATGCACCCGCTAGACTTTCTCTGAGCCCTTTCACATATGGTCCCTCCCATGAGGTTAGATACCATTGAGATGGCAACAAACATACCCCTGTAACAAAGGAAACAGCCACATCCGGCTTTTGAACCATATTGTTGAGTCATTTCGCCTCTGTGGCAGCCCTTCTAATACTCGGTTCCATCTCTAGGGAGCAGGTGCAGGGCTGGTGGAAGTTTTCTCCTGCAAAAAGGCTCTTGCTACATGCACCTGCTGAGAGCTGAATTGATGTTCTCAGCCAGTGACCATTCTGCCACTTTTACCCTAATTTACCAAGATACACTTTATTTGAAGATCCAGACTGTGAGCCCCCGGTGACCCAACAACCAGAAAAAAATACCATGCAATTTGTACAGGTTAGAGACCCTTGGTGTTGTAGCAGTCAAGGTTCTTCCCTTTGAGTAGGTCTAACAAAGAACAAGAGAGATTGTTTGTACCTAAAATTACCTGCTGAAAAAGATAAAATATCAAGGTACTTAGGTCTTCACAAATGTAATGTCATTAAGTATCACATTTCAGTGAGTCAGAGTCACAAACAAAAGACTAAACTGGTTGAACATAAAAAAGGGTTTTCAGAGTCATGGTCTATTCATTTTTTATGTCACTGAAAGTTATCATTTTTTCTCAAGTCTCCCCATGAAAACACTTGAAATCCTGGCAAGGAGGAATTTCATGAGTCCCTGAGTTAACTTGATAAATATTTTGAAACAGAAAAGACAATTGTACTTTAGATGATGGTTCTGATCCTCTTAATGTGGCACTTGAGACTCAATTTTACTGCAAAATATATCAATACAGCAGAACAAGTTAACATGATGGTTTCTCTCCAATAAGAGC EMBV3_32681 ACTTAATCCCCAAGTTCCTTATGGCAAATGGCCTAATGGGGCTGTTTGAAAAACGTCGAT Variant GeneID:509832|GDI2:NM_001033762:29_cdna 493^627 1 EMBV3_36191 GeneID:509832 13 GENE GDI2 NULL GDP dissociation inhibitor 2 EMBV3_37594 TTCCTCTGGGGGCTGGCCTTTTCTCCCACTACAATGGACTTCCTCTTCACAACTGGAGAA Gene BVV0102_381010 - 1 EMBV3_33318 GK000028.2:298077-368839 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10161 AAAGACTTCTGAATATAAAGGGTCTGAAATGTATTATATTTTTGTCCTGGTTTTAAATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17035 TTTCTTCACCGACGAGTGCAGGTTCAGAGAGATCCTCCTCCCCAACAACTACAACGCCTA Gene GeneID:618474|FGF4:NM_001040605:22_cdna Constitutive 0 NULL GeneID:618474 29 GENE FGF4 HST fibroblast growth factor 4 EMBV3_35429 AGTTTGCTCTGAAACACCTGCCTCAGGACCCCATGTTTAAGCTGGTTGCTCAGCTGTACA Gene GeneID:280682|CS:NM_001044721:884_cdna UTR3_Alt 3 NULL GeneID:280682 5 GENE CS MGC137617 citrate synthase EMBV3_09290 GAGCTTCGAGAGTCCCAAGTCCCAGAACTGCACAGGCTTTTCCCACAGTTGCATCACAAC Gene GeneID:535067|SUFU:NM_001098083:186_cdna Constitutive 0 NULL GeneID:535067 26 GENE SUFU MGC151923 suppressor of fused homolog (Drosophila) EMBV3_25762 AGAAGCTGGTGGTGGTGTTTGGAGCCACAGGGAAAGCTGCTGGCTGATCTGGCCAAGCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11951 ACGAAGCAGATGAGAAGGATGACTCGGGCGCCACCACGATGAGCATTGGTTCTGACAAAT Gene GeneID:513649|CCDC43:NM_001098962:239_cdna UTR3_Alt 3 NULL GeneID:513649 19 GENE CCDC43 MGC159622 coiled-coil domain containing 43 EMBV3_35143 CTGTGCTTTTAGAAACTTGCCAACAAACGATTATTCTGCCATCTTTGCTGAGAGTGAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28257 CCTCATGCTGTACTATCCTTCCATGGCCAGTGGCCTCCTTACTGAAGGGAAGACAAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05804 GATTCGGAAGGAGCTCGACGTTAATGGCCGCATGCTGGTTCTCCGATTGACTGCTGAAGA Gene GeneID:618023|LOC618023:XM_002699749:6_cdna Constitutive 1 NULL GeneID:618023 X GENE LOC618023 NULL similar to mCG1035526 EMBV3_17411 ACCATCAGCAAAAGGCAGGGAGGAACTGTTACGAATAAGTCTCCGTGAGCTGGAATTGGC Gene GeneID:506715|KATNA1:XM_002690319:14_cdna Constitutive 0 NULL GeneID:506715 9 GENE KATNA1 NULL katanin p60 (ATPase-containing) subunit A 1 EMBV3_16981 CATCCCTCCCCTTTTGTGTCTTTCTTCTAAGTCTGATGTTTTAACATACAACCCAGTTTC Gene BVT0102_035761 - 0 NULL GK000008.2:15183305-15958453 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13942 GAAGATGGAAAGCAACGTGTAACACATTCTGCATGTATAAGGAAATTACATGTGGAATTC Gene GeneID:525095|PIGN:XM_002697784:358_cdna Constitutive 2 NULL GeneID:525095 24 GENE PIGN NULL phosphatidylinositol glycan anchor biosynthesis, class N EMBV3_41554 AGTGGGTCCTGCTCTGTGTGGTGAGTTGGGAGGGTCTTCAGGGCCATTTTTTTTCTTCCT Gene GeneID:512391|LOC512391:NM_001109794:84_cdna Constitutive 0 NULL GeneID:512391 19 GENE LOC512391 MGC148975 hypothetical protein LOC512391 EMBV3_41784 GGGAAGAAACCCGTCCTCATCTTTCCTATAGTTCCACTAGGCTTTGTCCTTGCCTACCAG Gene GeneID:512609|C8H9ORF46:NM_001034426:53_cdna Constitutive 2 NULL GeneID:512609 8 GENE C8H9ORF46 MGC126999 chromosome 9 open reading frame 46 ortholog EMBV3_41409 AAGTTGGTGTCGGTGCCTCCAGGAAAAGTCCTTAATGTACAGGGGTCTGTGTGGCTCTGA Gene GeneID:517400|SNX30:XM_002689930:73_cdna Constitutive 1 NULL GeneID:517400 8 GENE SNX30 NULL sorting nexin family member 30 EMBV3_10168 GAGATCAGAAAGACTTCCCCACCAACTATATCTACTCACTCTTAATTGCAGTACCAGCAC Gene BVV0102_264895 - 1 EMBV3_43146 GK000021.2:58441798-58454562 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121742 TCONS_00121740 TCONS_00121743 TCONS_00121744 TCONS_00121747 TCONS_00121746 TCONS_00121745 TCONS_00121741 1 XLOC_073465 Coding TCONS_00121740 XLOC_073465 Coding Coding BTBD7 21:58451278-58476912 j TSS90609 6534 1 TCONS_00121740_2 650 8 0.745406312175711 0.00135489542841108 0.00219674389726945 0.00118468418938412 0.000649404655157695 0.000862401345429974 4.95831374844155e-24 0.000258473465346462 3.97557529842592e-10 0.000775000809588627 0.000772715700993087 0.000275672476564126 0.000104280536500187 0.000350852275748221 0.000912751158096087 0.000610069720333 0.00272875051164966 0.00152144013780739 0.000372216715404232 0.00078010846281146 0.00107634434254412 0.000170729527098564 3.29688421462692e-06 5.11684461874703e-09 0.000471546439111906 0.00119840536598474 0.00105584986596194 0.00100498569971903 1.62506382805595e-06 0.000230941896197025 0.000654017520886109 XM_003585089.2 BTBD7 PREDICTED: Bos taurus BTB (POZ) domain containing 7 (BTBD7), 0.0 1.168e+04 100.00 0.991276400367309 XM_005267846.1 BTBD7 PREDICTED: Homo sapiens BTB (POZ) domain containing 7 (BTBD7), 0.0 3743 89.07 0.434496479951025 TCONS_00121740_2 sp|Q9P203|BTBD7_HUMAN BTBD7_HUMAN BTB/POZ domain-containing protein 7; 0.0 1204 93.15 0.998461538461539 0 coding 0 0 0 0 -0.00175154296576165 0.992936912538881 0.0157291405836126 0.785100013590503 ACCAGCCCCAGTCCTAACCAGCGATTCCCCAAAGGGGTTGTGGCAGTAGGCAAGGCAAGTGAACAAGATATCCTTAAATATCTGATTAAATGGGGTGAGCATCAGTTAATGAAGAGAATAGCAGACAGAGAGCCAAACTTACTGAGTGGCACTGCTCACAGTGTGAACAAGAGAGGTGTGAAAAGACGGGACCTGGACATCGAAGAGCTTAGAGAGATCCTTTCCTCTCTCTTACCTTTTGTGCGAATTGAACACATCTTGCCTATAAACAGTGAAGTCCTAAGTGATGCAATGAAAAGAGGCTTGATTAGTACTCCTCCATCAGATATGCTTCCTACAACAGAAGGTGGAAAGTCAAATGCCTGGTTACGGCAAAAAAATGCTGGAATCTATGTTCGTCCTCGGCTGTTCTCTCCCTACGTAGAAGAAGCGAAGTCAGTGCTAGACGAGATGATGGTGGAACAAACAGACCTTGTGCGTTTGCGAATGGTTAGAATGTCCAACGTGCCAGACACGCTTTACATGGTCAGCAATGCCGTGCCTCAGTGCTGCCACATGATCAGCCACCAGCAGATCAGCAGCAACCAGTCGAGCCCTCCTTCAGTGGTAGCAAACGAAATCCCAGTTCCTCGCCTCCTCATTATGAAGGACATGGTCAGACGTCTGCAGGAGCTACGGCACACTGAGCAGGTGCAGAGGGCCTACGCGCTCAACTGCGGGGAAGGCGCCACGGTCAGCTATGAAATTCAGATCCGCGTGTTAAGGGAGTTTGGGCTTGCCGATGCCGCAGCAGAACTCTTGCAGAATCCTCACAAATTCTTTCCTGATGAACGATTTGGAGATGAAAGTCCACTCTTGACAATGAGACAGTCTGGGAGATGTCGAGTTAACAGCACCCCCACTGCAGAAACCATGTTTACAGATCTGGACTCTTTCGTGGCCTTCCATCCACCCTTACCCCCTCCACCGCCTCCCTACCACCCGCCAGCAACCCCAATCCATAACCAGCTCAAAGCAGGCTGGAAGCAAAGACCTCCCAGTCAGCATCCTTCACGTTCGTTTTCTTATCCCTGTAATCACTCACTGTTTCACTCCAGAACAGCCCCTAAAGCTGGCCCCCCTCCAGTCTACTTGCCAGGTGTGAAAGCGGCAGCCCCTGATTGTACCAACACCACAGGACTGGGGAGACAGACGGTGGCTGCTGCTGCCGCTGCCGCCTCAACAACAATAGCATCTGAAAAACAAGTGTGCACACAACCTGTGCTAAACGATCTAATGCCAGATATTGCCATGGGTGTATCCACGCTGTCACTCAAGGACAGGAGGCTTCCAGAACTTGCTGTGGACACAGAATTAAGCCAGGCAGTTTCTGAAGTAGGACCAGGGCCTCCCCAGCATCTATCGTGTATTCCACAGAGGCATACACACACATCTCGAAAGAAACACACACTAGAGCAAAAAACAGATGCTCGAGAAAATCAGCAGGAATATCCGGATTTCTACGACTTCTCAAATGCTGCTTGCAGACCATCTGCTCCTGCCCCTGGCAGACGGACCCCCTCCCCTTCACAAGGTGGATATTTTGGTCCCGATTTGTATAGCCACAATAAGGCATCACCAAGTGGCTTAAAGTCAGCCTACCTACCAGGCCAGACCTCGCCTAAAAAGCAGGAAGAAACTAGGAAAGAATATCCACTTCCCCCCGACGGGCATCCACACAGACAGAAGAGTGAGCCGATACACCTCGACGTTGTTGAGCAGCCTCCCCAGCGGCCAGATTTTCCCTTGGCAGCCCCAGAAAATGCCGGCAGTGGTTCAGCCCATGTCAGGGGGCGAGCAGCAGTGGAAACTGACTTGACTTTTGGGCTGACTCCTAACAGACCTTCACATTCTGCATGTAGCTCTGAAGCTCCAGAAGAGAGATCCGGCAGAAGACTGGCAGATGAGTCCCTGGGCCATGGAGCTCAGCGAAATACAGATTTGGAAAGGGAAGATTCAGTCAGCAGAGGAAGGAGGTCCCCCAGCAAGCCAGACTTCCTCTACAAAAAGTCTGCCCTTTGAGAGCAACCTCCAAGTCGTCCGTGCCTGAGATGTGAAACATCCCATTTTATGATGTAACCCAACAACTTAGAGACCAGTTTATTGATGCCAGCTGATAACTCAGTTTCACGTTATTTTATTCTAGTTTTTGTATATACATGTTTATTAGACATGGCATGCTAAGAGGGTTATTTTGAATGCTGCATCTGCTGTCTGTTTTGTGTTTGAACAATTGTGTGGGGAAGCATTTTTAAGAACAAGCAAGCTGGCACTTTTTTTTTTTTCCCCTCTCTTCACAAACAATGGGATTTTTTTGCACTTGTACCTTTGTTTTATCTGTATTGGTTTTATATCAGTATGTTAAACTTTATTGCCACATTTAAAGGACTGTATTTTCATACTTTTTTGCATTTTACCTTTCATCTACCTATTTCCACGTGCATTGGATTGCACACTAAGATGTATTTTCTTATGAAATAGTTCTGTGTTTATTTTTTAATTATAGAAATTCCAAAGAACAGCACATCAAAAATGCTCCTCTCTTTTCTGTAGTTGTTTCAGTTCAGAAACCTTCCTGCTCAGTCTTCATAAATCTTATGTCATCCTGTTTAAATAAGTCCTGGGAGCTGGTCTGCATTCCTCCAGCAGGAGTCCAATCAGGAATCCTGAAGTTTTCCTGGTTCAGGAAAGAACAAGAAGGAGAAAAAGCCTTCTGCATCCAGGCAAAAGCTTGTTGTTTTATCCACAGTACAGACTCTGTTAGAATCACTGCAGGTTCTGGTCATGTGGATTAGAGTTTCACTAGATGAGGTTTGAAAGAGATCAGCTTTCTTGGAATCCTAAAGCAGTGGAATTAGTAACTTAAGCTTGCACTACGGGATCGCTGCTTCTGAGCATCGACTCAGCAGCTGAGTGGGGAGTGACTGCTTGCTGCCTTCAGTTGTCCTGCTCTCTTGTGGGGGGGAAAAAAAACAAAAGGGCTTCAGTCTTACGGATGTCATTTGTTGTTTGTAAGTAGATGTTTTAAGTGTTTTTCAAAGTGTGTCCGAAGTTTGGTGTCCTTTAAAAAGTTATTGTATAATGCATAATGCTTTGTCACCAAAAAAGAAAAACCATTTTTTTTTCCAGTGAAACACTACATGTCCTACTTGAACTCCACTGGGGATGCTGGTTTGGGATTTTACTGAACCACTGAGCACATGGGGTCTTTTAAGATCCTTTCCCTTAGAAGGGCAATGTGTGAGCTAAGGACTGTTTTTTTCTTACTCTCCAATGTAAATATATTAGCATTTGAGTTTTTAAATCACTTCAACATTATTTGAGCATTCACTTTGTATTTTTACACATAACACACATACAGCCGTAGCACTTAGATTAAAAGAGACTTTTCTGAGCACTCCCCTCACTTGAGGGATGTTCGGGAGCCTCCTCTCTGTGTATGTGTATATACATATATACAACTCTGAATCACTCACACTCACTCTAAAACTATGCAGGGCTAGGGAGCCTTTACAAGCTACCATATAAATGAATTACATGCACTTTTAAGTAAATAGGTTTCTATTGGATGTCAGCAGCTCTGATTTTTCCCGAAACTGTAGTTTCTCTTACAGTCTCTTCCTACTTTACCCTGTGGATACACACTCAGGAATAATCTGACATTTTAAAAAATCCTAACAGTAGATAGTCTCAAAGATGGGAACACGTCAGTTGATCTGTCTACACCGGCAAACCGCCGCCACTCGCTCTGCTGCCTGGCTAGTTAGCTGCTGCCCACGCATCCGTCCATGTTGGCCACGCTGCACACCAAGCCCTGGGTCTCCCAGAGTCAGCACCAGGCCGCTGCGAGGTTGGCTGCATATCATCGCCTCTGAGGCTCCTTTTTGTTTTGTTTTGTTTTAAGATGAAAAACTTTAGGACTCTGTTCTCATTTTTAGGAGGTTTCACCTTTTGTAATAAGATGACAGTGTCTTTTGAAACTAATCTCGGTCTGTCTCCCCTCAGAAACAAAAAATATTCATTCCATCACATTCCTTAAGGTGTATTTATGTACATGTGTTGACATGAATTCTCTTGATACAGTTTTAAACTTCTCTTCTGAATTCAGACTGTGCTGTGCTGGTACTGCAATTAAGAGTGAGTAGATATAGTTGGTGGGGAAGTCTTTCTGATCTCCAACCTGTTTTTTTTTTTAAAGACATAAGAGCTATTGATGCCCCACATGGCGTATTTCTGAAAATTTATTAAATATTCTTTCGAGTCCCCAAAATATAAAAGAAGTGACCCACTGTTTGTAGTTTTATTTAATTTATGAAGTTTGTTTTTAATAATTTGGTAGCATACCTGGCTGAACTGTGTATAGAGAGAAACGTGCTGTGGGACTGTGGACTGCTGTGACTTGCAGAAGGTGAACAGATGTGGGTTTTGTGTTAGGGTAGGGTTAATGGATTTTTAATGTGTCTCGTGAAGTATGGTCAGTAGGGTAGGTTGAATAGCTGTGTGCCTCTGGCTTTTGACCCCATCTCTTCAATCTTTTTTAATGCTTCTTAAGCATTAAAATCTTTCAGTGCTGTACTAAGATAAATGTGAAGTCTGAGTAAGATTGCTCTGAGAAATTAACGTGTATAATATGAGACTTAGGCCCTAGGACCTAGTGTTTTACTCAGTGTAGAAACTTCCTGAGAACCAAATCTCAACACACCAGATCTCCTCTTGAGGCCGTGGACAATCAGGCCATTAGACAATCGCCACTTTTGGTGCCCGCCATGTTGAGGTTGGCGAATGCCAGTTAGATCCTGGAGCGGAAGCAGAGGATCCATGTTTCTTCAAGATGCTGTTGGTCTTGTTCTTATATTTTTGTTTTAATTCTGTGATCTTGATTAATAATTTCAGCTCAGAGTCATAGGTATGACTCCTAAGGGGAAAAGATAGCAGCAAGAAAGGCAAAACTTACTCGTGAAAAAATAATCATTGGCCTTGTCCACGTACCATGCATAACCCTTCTCAGTGCCCCTGTAGCTTTTTCTAGGCACATCCCTAGACCTAAGCTTTCCTGACATTTCGGTAACCAGGTAGATTTTAAGGATTTTAAATGACTTCTTTTTATTTGAGTTTTTTTGTTATTGTTGAACTCTCTGTGAAACTTTACCTAATTCTTGTTTATGCTTCCTTAAAAAAAAAACTTGTTCATTGGGTTTTCTTTGGATTTGTTCTTCAAACTTGAGTAGCAGTGGACAGCACTAGTCCATTGATGGAGGGAAACCAGCACATACGGCCTCAGCAGGGGCACAAAGCTGACCCCTCCCCGTGTGTCAGTCTCTGGAAGTCTCAGTAACGACTTGGCAAAATATGTATTTTCATGTTTAAATCTACCTTTTAGGGAAAATAAGTTTCATGAAACACTTATAAGATACTTGTTTGCAATTCTAAAGCATTTATGTTTTTATCTTAGGACTGAACTCAAAGGGAAATGTTTGACTTTTCATTTTTAATTATTTGGTTGACCTTTAACTTCCTGTTGAAAGTTCCTATTAAAGCAGCAGTGATGGGTGCTACTCCCGTTCTGCAGTGGTTTACTTTGTCTACTAAGGAGTTTACTTTCAAACCTCATTACAGATAACCTTACTAAAAGAGTTACCGTCACACACTAAAGGGTATCGTGCTGTTTTTCCATTAACACTATTGTGTAAACAATGTTCTATGAAATGTTAAGTTGTTTCTTTGTCCTATTGATTGCAATAGCTGTTATGTAATTGTATTGGCAAGTCTGATTTTTTTTTTTCCTCTAGAAAACCCTCAGACCATGAATCAATCTTCCATATTCTGAATATTATAATGCTGTGGCCATTTCTGTAGAAAGATGACTCGCAAGTGTGTATCTTGAAAGTGACCTCTTGTGTTTGCGTGTTTACGTGGGTTCTGTCTTAAGAGCTGAGAGGAGCTCTGGAAGCTTCATGGTGAACCTGCACATGACTGTGTGGGTTCCACGGGCAGGTGGGACGGAACCTCGCTCTTAGGTGGGGTGGCTGAGAGGGAGACTCCTGAACTCCACTTGCTGTTGATGCGCCACGTCTGCACTCGAGAGAGGTGGTGTCTTCTGCAACACTGCATTGCTTGTGGTTGTGCTGTTACTGGTATAAAGTCAAGTGCCTTCAATGCTAAAGGCTCAGAAATTTTTCTTAAAACTGATTTCATGTCCTATGCAAGTGTTTTCTACAACCTGCATAACCAGTACTTTGTAAAACTTGTTTACGCTTCGACTGTACATAGTGTTTTTTAAAGAAATACATAGTATTTTTATTTAGGTACCTCCGAACTTGAACTCGTCTGTGGGAAGCATTGTAAAACGATCGATCCATTTCTCTTTTGAGTACCATTACGGTTGTACAAAGGTTTTCACTGGTTCTATTTTTCTACTGTTACTGACAAGCATGTAACACTGACTTTATCCTACATATAGTTGGCGTTTCAAATAAATGGCTTGGATAGAACTCG EMBV3_01225 CATCAACAGGCACCGTTTCGGGGTGGAAGCGCTATGGCGGGCGTCTGACTACGTGCGGTA Gene GeneID:768023|MGC137027:NM_001077082:75_cdna Constitutive 0 NULL GeneID:768023 7 GENE MGC137027 NULL hypothetical protein MGC137027 EMBV3_15685 CAAGGATACCAAGGCTCTGTTGCAGTGTGTCCACTCCATCTACATCCCTAACAAGGTGCT Gene GeneID:511363|SPATA20:NM_001083407:91_cdna Constitutive 0 NULL GeneID:511363 19 GENE SPATA20 MGC142822 spermatogenesis associated 20 EMBV3_43235 GAAATCCAACATGCTTTGCTGTCTGGCTCAGTGTTTTCTTTCCCCAAATTGTTGGCCCCA Gene BVT0102_125148 + 0 NULL GK000011.2:60687733-60934733 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39803 TGCTTAGCACCTCCCCTGTGACCCTCCTCCCAAACCCTGTCATTTCACCTCCGACTCTGT Gene GeneID:511887|DGKZ:XM_002693565:240_cdna Constitutive 0 NULL GeneID:511887 15 GENE DGKZ NULL diacylglycerol kinase, zeta 104kDa EMBV3_36887 GGAGGGACACAAGGGAATTTCCTGGGAGTGACAATAAGTTGATTTGAAATAGATTTGCAT Gene BVV0101_050884 + 0 NULL GK000022.2:52480018-52512151 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26557 CGTCAGGACTCCTGCCCTGGTGATACCCTCCCAGACTCAGTGGTTCTCCATCCTTCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12875 CTCTGGATGACTTTAGAGAAGCATGCCATAGGGACATTGTGAATTTGCAAGTGGAGATGA Gene GeneID:519463|NEDD1:NM_001035333:1040_cdna UTR3_Alt 3 NULL GeneID:519463 5 GENE NEDD1 MGC128761 neural precursor cell expressed, developmentally down-regulated 1 EMBV3_18782 TTAAGCTGCAGGTGCTTCGTACTGTACACCCAGAGCCAAATGAGTGACACTGTGATACAG Gene BVV0102_159352 + 0 NULL GK000001.2:150923435-150961577 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016741 1 XLOC_008897 NonCoding TCONS_00016741 XLOC_008897 NonCoding NonCoding - 10:34643250-34662342 - TSS11610 6371 2 TCONS_00016741_5 112 0.246586093234971 3 0.666439683620554 0.000273184983444161 0.000426460220052949 0.000598011061992092 0.000392646475114631 0.00040043609727026 3.99577422216884e-05 0.000448067272006705 0.000659750776926307 0.000352630961000211 1.82067055578893e-05 2.29646585835319e-06 1.40196348021596e-05 2.81286860335372e-05 4.80590838716291e-06 0.000188998055566067 0 0 0 0.000542579193656207 0.000521801353719784 0.000154757443084728 0 1.01071605020079e-13 0 0.000364339865468754 0.00028943494469113 0.000335787267284061 1.6239637070951e-06 9.79367716112064e-07 1.26718674156089e-05 XM_592211.6 EGFR PREDICTED: Bos taurus epidermal growth factor receptor (EGFR), 2e-133 482 91.47 0.0532098571652802 0 noncoding CTCAAGAGAATTAGTAATGAGGCCAGTGACTTTCTCCAGTTCCTCAAATAGTGAAATTTTACCCAGTCAATCATTGACTTCTCTCCTAGTCAAAACAGAATAGAATGCAGCTATTCAAATTCTTGTTACAAGTGCTCCATTAGGTCTTACAAGGCAATCCAGAAAAGGATAATATACCCCTGCCATGCATGTAACAGCAGAGTCATGAGAGCAGAACTAATGGGTGAACAAACGACCTCCTTTCACACATTTGGAAAATCTGCTTTATGACACTTAGTGAAGTTTGATACCACATGAAGGATACAGAGATGATACCTCTGCATCCATCTGAATCCATATCAATGTATTATGGGAAAAAAACAGTAGTCAGAATGGGCCTGAAAACATGGGCCTGATAAGAAGGAAGTCAGAGAAATGAGAACAGTGTAAACAAAAAAGCTATGGTGGATAAGGCAGGAATTTAGAAGTGAGCTTTGCCTTCAACTCCTGATTCTGTCACTCAGCATCTGTGCAAGACTGAGCAAGTCACCTGGCCACTTTGAGCCTACTTTGTATAAGCTGCAAAGCAGACAATAACGCTATCTCAATAGGGTTACCTGAGGGTTAAATGAGATAACTTGCATGATGCTCTGATTTGGAGATGACATATACCACGCTCAGCTCCTCCTCATAACACTCATGTCAGGCATAGCTTCTTCCCCCATCTCTGACCCCTTCTACACTAAACTCCTGTCTTCATGACTCAGTCTAGAGCTTCCTACTGTCCCTCAGATCACTCTCTCAAGTCATCCTACCTTGGGATATTTGCATTCTCTTCTGCCTCGGATCCTCCTACCCAGATCTTTAGGTTTCTTGCTCCCTCACTTCAAGTAAGCTTCAATTTAAACTTGATCTCTTTAGAGGCAACTTGCCTGATGCTTTGCTGAAAACACCTCACTGATTACTGTCTGAAATTGCATCCTGTATTAATCTGTTTTCTCATTGTCCTCTCTCCATAGAATGTGGGTATTTGTCGATCTTGTTCATCACTGTATCCCCAAACCCTTAGAACAGTGTCTGATGTATCTTGGGTACTGGGTAAATATTTACTGAATGTTATTATTAGTAATGAATGAATAAAATGAATAAAAGCATTTTGAAAAAGCACTATAAAATTTGCCAAGCACTTGCTAAGTCCTAGGTGGAGAGAGATTCTAAACCAGTATGAAAAAACAGTTTGCCCTAGATGGGTAAAGAAAACAAAAGTGGAAGAAATCTTCATATGCTGTTTCTGTTTTGTTTTCTGATTGGAAGTTAATCTTCTAGAGTGTAACTACAGGAGGAGTACAGAAAAGCCATAAAACAGGCAGAGGAGCCTCTGAGAGCTTCAGCATGGAACGGGTGAGAAGGCCCTGGAGGAGGCCCCACAAGCTGGTGATCAAGCTGTCCACAGCACTGCTGGAGGTCCTCATGACAGATCCCACTGAAGCCACACGTGCCACATCTCTGCTGACTGCCTGGTGATGGCACATCCGTGGGTGACAGGATGGGATGTGAGCCTTTCACGCCTTCTGTTTTCCTCATGCCTCCAGCTGGGCTCTTTGGGAGGGGGTGTGTGTGTGTGTGTGTGTGTTTCTTTTCCTTGGCTCACAAGTCACATCAGTCCGCTCTTGGTACTTGGCAACCCAGCACGCTTCCTCCCACTAACGACAAGCCCGTCTGCAAAACAGAACAACATCTTTGAGATGGGGTGTTTATCTGGGCAGCACACAGCCTCTGCAGCCCACAGGGGCCCCTCCTTCAAAGGCATTGCTGAATGGGACTCACCTGATGAAAGCCCGAACTGTGTATGCTTGACTTGATTTACGGGCAACAGCCAGCTCATTAGGCGCACTGGCCTGAGGAAGCCAGTCGGCTGTGGGGACAAATGTTTGTGCAGCTCTGTGGTGCCCACAGGGATGTTTGCTTGGGGGCTGGAGCACAAAGGGGGCAGTGATAAGGGGCCCTGGAATCCATGCCTGGCTCAGGGAGCGCAAACTGCCCAGGAGATTGATATCTAGGGTGCAAAGGCTAAAAAAATTAGATTAATTTAGCTCAGCTGTACTTGCTGAAGGATTGGGTTGCAGCTGGTGCTGAAACATTAGTGATCAACCCTCAGAGATCAGGGGTCAAGTCTCAAGTTGGAAGGAAGGGGGTAAGATGGATTGCCTCTCAGTATGCCTGCTCCCCAGGAAAAGGATAGCCTACAAAGGCAGCCCGGCATTACAGATAGTCCTGTGGAACACCACTGAGAAAGTAATATATCAGAGAAGGCAATGGTACCCCACTGCAGTACTCTTGCCTGGAAACTCCCATGGATGGAGGAACCTGGTAGGCTGCAGTCCATGGGGTCGCTAAGGATTGGACACGGCTGAAGTGACTTAGCAGCAGTAGCAGCAGAATCCCAAAATCCCACTGGACCAAAATAATATTAAAGATAGCCAAGGACAACATCTCTGAATGGGAGGCAAGAATCCTCAGAAAGGTACACCGTGATGATTCTCTTTCATTCCTGCACCTCATCATGAGGTATGGGTAGACTGTTTACATGGTTGAAGAGAATTGTGAATGGCAGTGGGAAGAGGCATTAACTTCTGGTGACATGAATATCGACTCATAGGCATCATGACTTCACTATTACCTCTGTGTTTCTGGCACAGCCCTGTGAATAGTCAATGAGCCATGGTGACTCAAATCATTCCTATCTATCCTATCTAATAGAAAGCTTGGTGATGTTTTAGAAGCAACCTTAGTGTCCAGTTGACCCACTCAGTGAAGTACTGGATCAGGCTGGGTTCAAATGAGAGTGCCACATCCTAGGAGTCAATATTAGGCTTGGGGACAGAGCATTGTTGTGCCAGAAATTCATGCTTGAAGATTAGGAAATGATTCAGGAGTTAGGGAACCCAGCAGGATCCAGGTACATAGCCAAGAAGATGGAATCTGGTAGCAGAGAAGGGTGCAAATTTCCCAAAGAATGATACTTCTTTTTCACTGTCTTGATAATTTCCATTCCCACATTCATGAGATGAAAGTTGCTAAGATGCTTGAACAAGGATTGTGAAATTACAATGAGAGGATGTTTCCTTTGGTTTTTAATTTTATTAAATGTTGCTAACAATGTGCTCTCTTGAACAAGATTTAAAGTATGCATGATCTGTCCTGATGGACTGAGCATGGTAAAAGGGTCATGGAGTAACTCTGCCCTAAGTGAATGCATATTAAGCTGCAGGTGCTTTATATTGTACACCCAGAGCCAAATGAGTGACACTGTGATACAGTGATTATAGCCTCAGAGGTTGATTCCACAGTTTATTTTTTTGACGGTATAGTAGTAACTTGGGTCCTCCTATAATAATTTGAATTTTGGTCTTCTCACCCAACAATCTTGCTGTATAACAGATCACTACTGAATCCCAAGCTGATACTCTTACCCTGCCACCCTCTGAGCTATTTACTTAACAACTAGAATGAATCTGCTCTGATCTAGCCATAGCAAACACCCTAGTATCAGCATGCCCCTGCCTGGTGCCTCCGTGGTTCATTGCTCATCTTCCGACACCTTCTTCAGAAGGCGTCTTTATGTTATCCTTCCTACACACAGGTTTTGCTACCACCAGGTTACGCTCAAGGTTTCAATTTTGACTTCTAAGGCTTCTCCCATCAAATTGTATTTATTTAGTTTTCACTTCTGTTGTGTTCTTCTTCAAAAACAAGTAATGAAGAGTGAAGCTCCATGTAGGAACTGAACATGACTTGGACTCATCTGCACAACTTCCTAAGCTGCTAAGCTAGAAGGCTCTGAGTCCAGTACAAACACCTTGTCCTTATGTACTCCAGCCCCCATTGCCGGAGGTGATGATTGTTGTGCTGTGTTTAAATTAAAGGAAGGAAACCTTAAGCCAAATAAATTGAAAATAAATATTATTTTTCTCTAAGACTCACCAGTGTGAAAAATCTCCTTTCAAGGAACAAACTTTGTTATTAGTTCTTAATGTGCCAAAAAGTCAGCAATGATTGCCCCTACTTTATACCTCCTCTAAAAGAAATAAGTGGATGCCTTGTCTCATATTGTAAGCGCAGCATTATTTAGGTTTATTTTAAACTTCCAGCATTCTAGGGTTCAAAGATATGTTTCCTGCTCAAAAATAGATTTGGTTTTGTAAATCTTTTTGACAGCTTTGTTTGTCTAAATAAAAGTTTTAGAAATCTTAATTTGATAATTCAATCCTTTATGGTGTTTCCCTAGAAATATATCTCAAGGCCTAAAAGGCATTTTAAAATGACTGAAATGATGACTATGGCCATTAGGTCCAGAAACACATAAGTATCAAAACACCATGTGCAGCTGTCTCTGGTTTTCCTGAGTGAGCTCAGAAAATGTAGAGGAAGAAAATAACTGAATGAAAGGACATAAGTCACCCAGAGTTGATGTAGTTCTTTATTTTTTTTGAAGTATTTGGGAGAAGAGAATGGACAAACCAAAAGTAGGCTGGCAATGGAATACTTTCCATGGAAGAGATATTCTTTCTCTCTTTTTATTTAGTGAGGCTTTCTTCCTTATTATCATTTTTTCTTAGCACTTAAAGTTGGATACTAGAAGATTCCCTGGAGAAGGAAATGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCATGAACAGAAGAGCCTGGCGGGCTACCATCCATGGGGCTGCCAAAGAGTTGGACACAACTGAGCAACTAAACAATAGCAGCAACAACTAGCTTTCTGTTGTAATTACTTTGACTATCATGTGAGGGAAGTAACCTTAGCTAGCCACCTCTCCAGATGTATCTTATAGATTTCATAAACATTTCTTTAAAAAGTACTATAGGAAGATTATTCCCTAACCACAAACCTGTCCAGCTTGCATGCTTAGGACTATCTGAGGCATTCATCATGGTGTTCTCCATCTCGCTGTCTGTTAGCACCTTGGGAGACAGAGGTCAAAATGTTTCCTTAGGGAGGTTTGTCACCTCAAATCATCAGAAATCTATGAATTTCCTCTTTTCCAGACATACTACTAAATTTCTCCATATGTCCTAATCGTTCCAGTTCTTTTTCCTTCCAGGTGACTTTAGAAAGTCAGGAATTTGTTAACTTTGAAAGTTCTTTGAGAGTGGAGATTATGAGACAGGTTCAGTTCAGTTCAGTTGTTCAGTCGTGTCTGACTCTTTGTGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCTGGAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTATTGTCCCCTTCTCCTCCTGCCCCTAATCCCTCCCAGCACCAGGGTCTTTTCCAATGAGTCAACTCTTCGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTTAGCATCAATCCTTCCAATGAACACCCAGGACTGATCAGGATCCTTTAGGATGGACTAGTTGGATCTTCTCGCAGTCCAAGGGACAGGTACTTCTGCTTTATTTGAGAAAAGGGTAGTTTCTATGTTTTTGTTTAGTATACCCCATTCCTGACAGTAAAAGTTACATCTTGTATTTGTACATTAAAAAAGGAAGAAACCTCTCACCACCCCAAACGACTACATGTCATCAGGACTGTGTGTGTGTGTGTGTGCATGCGCACACACGCATGTACATATGTATTCAAAGACATCCTGAAAATGATTTTTCAAAATTTATTTATTTATTTTTATTTTTGGCTGTGCTGAGTCTCCATTGATGCTTTCAGTCTCTCTAGCTGTGATGAGCCAGGGCTTCTCTCTAGTTGCAGTGTGCGGACTTCTCATTGCTGTGGCTTCTCTTGTCGCATAGCACAGGCTCTAGAGCACACAGGCTTCTGTAGTTGTGGCACTTGGTCTCAGTAGTGTGGCTCTCAGGCTGTAGAGCACAGGCTTAGTAGTTGTGGACGTGGGCTTAGTAGCTTGCCCTGCAGCATGTGGAATCTTCCCAGACCAAGGATCAAACCTGTGTCCACTGTATTGGCAGGCAGACTCTTTAACTACTGGCACACCAGGGAAGTCTTAAAAATATAACTTTTGAATCCACATATTGTGCCAATATATGATCATTGTACACATCATTAAAAACAGTCTCTATGAGTGCTATTTAGTATCCCCATAAAATTCCATTGTATATTTCTCCTACTAGATTGAGCTGAATGAAATTGATGGCCTTTAATCTTTTAAACCTACAAAAATGGTAGTTTTACATGGTTCAACCTAGTAAAATTTGTTTCCCAATCATTGGACATCATGTCTAGCTTTTAAAATGTTAAATAATTGACCTATGACTATTTTGAAC TCONS_00016729 s 5' 227637 TCONS_00016729 s 5' 231589 EMBV3_16967 AGCGGAAGCAGGAGCAGAGAAAGCCCATGGAGTCTGCGCCGAGGGATGGAATTTTATTCT Gene GeneID:100125941|CLRN3:NM_001105504:2_cdna Constitutive 0 NULL GeneID:100125941 26 GENE CLRN3 MGC166110 clarin 3 EMBV3_32735 GAAGAGGACTCAGAGGATGATGAGGACATGCAGGACCTGATCTTCTTGGTCCCTCCCAGG Variant GeneID:505356|C15H11ORF51:NM_001034243:137_cdna 300^544 3 EMBV3_05024 GeneID:505356 15 GENE C15H11ORF51 MGC128633 protein HSPC020 homolog EMBV3_31751 GGTGCAGCTGTCGTGGGAGTGGAAACATGGAGGAAGAGTGTGAGAAGTTTCTGAAGGATT Gene GeneID:514036|GFRA2:NM_001015595:79_cdna Constitutive 0 NULL GeneID:514036 8 GENE GFRA2 MGC142640 GDNF family receptor alpha 2 EMBV3_03947 GGGATGCAGTTATTTTTAGGTTGGCTTAGAAACTGTTAGGTTTGGAGGAGCCTGGTAGGC Gene BVV0102_044149 + 0 NULL GK000001.2:70698146-70730928 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003832 TCONS_00003834 TCONS_00003831 TCONS_00003833 1 XLOC_000925 Coding TCONS_00003831 XLOC_000925 Coding Coding LMLN 1:70727640-70783612 j TSS1952 5321 1 TCONS_00003831_3 365 0.0717910167261793 16 0.905218774007968 0.000518509306999037 0.000152829386346495 4.13156736389213e-15 0.000567152514916072 0.000121602648127073 2.4095564887513e-20 2.22781247676226e-05 2.30910725085254e-18 9.97650206986046e-05 5.74981344009848e-11 5.04281946323326e-06 7.2873817106581e-05 7.76333770017508e-07 0.000100994892479243 3.54140855586675e-05 0.00123065135972037 8.01049893927007e-05 1.2552141819205e-07 0.000613786857729335 0.000379383294437105 0.000361252387364948 0.00115438664097421 0.000249290237281136 0.000338923627264864 6.96682233827097e-09 4.53375960472032e-14 3.82376605763565e-09 1.97018593344861e-08 0.000168609910407829 0.00033864709968372 XM_002684816.2 LMLN PREDICTED: Bos taurus leishmanolysin-like (metallopeptidase M8 family) (LMLN), transcript variant X1, mRNA. 0.0 1507 100.00 0.156737455365533 NM_033029.3 LMLN Homo sapiens leishmanolysin-like (metallopeptidase M8 family) (LMLN), transcript variant 2, mRNA. 0.0 1079 88.56 0.156925389964292 TCONS_00003831_3 sp|Q96KR4|LMLN_HUMAN LMLN_HUMAN Leishmanolysin-like peptidase; 3e-147 436 95.69 0.56986301369863 1 coding 0 0 0 0 0.0444759528409452 0.708021544511103 0.0032526195407705 0.945907723467271 ATCTCGGATGGAGCCTCAGAATTTGCAGTTGAAGTTCCCAGATCGTTGATGATGCTTCTTGTCCAAGGACCTTACTTTGGAAACCACTGACCTAAAGGTCATAAATAAGGTCCATCTTAAAAATCATGTTGTAAAGAGAGATGTTAATGAACATTTAAGAATTAAGATTATCTACGATAAAAGTATTGAAGAGTTGCTCCCTGAGAAAAGACACCTTGTAAAGAACAAACTTTTCCCACAAGCTGTTTCTTATTTAGAGAAGACTTTCCAGGTTCGTAGACCTGCGGGCACTATATTACTTAGTAGACAATGTGCAACGAACCAATACCAATACCTACGGAAGGAAAATGATCACCATAGATGCTGTACTGAGGAATGTGCAGAGCATACAAAATGTGGTCCCATTATAGTGCCTGAGGAGCACCTCCAGCAATGTAGAGTCTGTTGTGGTGGTAAGTGGCCCTGTGGAGCAGTGGGTGTGCCAGACCAAGAGGGAGTCCGGGATGCAGACTTTGTTCTTTATGTTGGTGCTCTGGCCACTGAGAGGTGTAGCCATGAAAACATCATCTCTTATGCAGCCTATTGTCAGCAGGAAGCAAAAATGGACAGGCCAATAGCAGGATATGCTAACCTGTGTCCAAATATGATCTCTACCCAGCCTCAGGAGTTTGTTGGGATGCTGTCCACAGTGAAACATGAGATTATTCATGCGCTGGGTTTCTCTGCTGGGCTATTTGCATTCTACCATGATAAAGATGGAAATCCTTTAACTTCAAGATTTGCAGATGGTCTCCCACCTTTTAACTATAGTCTTGGATTATATCAATGGAGTGATAAAGTAGTTCGAAAAGTGGAGAGATTATGGGACATTCGTGATAATAAGAGAGTTCCTCACACTGTTAATCTTCTAGTAACACCTCGTGTTGTCGAGACAGATGCTGAACCCTTACTGTAACACACTCAGAAGTAATCCATTGCAATTAACTTGCAGACAGGACCAGAGAGCAGTTGCAGTGTGCAATTTGCAGAAGTTTCCAAAACCTTTACCTCAGGAATACCAGTACTTTGATGAACTCACTGGAGTACCTGCAGAAGATCTGCCTTATTATGGTGGTTCAGTAGAAATTGCTGACTACTGCCCTTTCAGTCAGGAATTCAGTTGGCACTTAAGTGGTGAATATCAGCGCAGCTCAGATTGTAGAGTACTGGAAAATCAACCAGACCTTTTTAAAAACTATGGTGCTGAAAAGTATGGGCCTCATTCAGTTTGTCTAATTCAGAAATCAGCATTTGTCATGGAAAAATGTGAAAGGAAGCTGAGTTACCCGGACTGGGGGAGTGGATGCTATCAGGTTTCTTGTTCTCCAGAAGGTCTGAAGGTTTGGGTTCAGGATACTTCATATTTGTGTAGTCGGGCCGGGCAGGTCCTCCCTGTGAGTATTCAGATGAATGGGTGGATTCATGATGGAAACCTGCTCTGCCCATCATGTTGGGACTTCTGCGAGCTCTGTCCTCCAGAAACAGATCCTCCAGCTGTTAACCTGACTCGAGCACTACCCCTGGGTTATTACAGAGTATTGAGGAAACAATCATTTAATTGTCCCCCTCCTTCACCACCTCTAGGACAAAGACCATGTCTGTCGGTTTCTTGTGTTCCCAGCAGAGTGCCTGCCAGAGTTGGTGCTAAATATGCACTGAACATTCTGGAAGCCACATCCAGATCAGTGCCTGCCCTCTCTGAAGCTGACCTGCTCCGATTCCTGAGCTCAGTAGATGCTAGTCTGCTCATTTTCACCACCATGGCTCCTGGGCCATGGTGCACGGCAGCCACACCAGGCACTGTCATTCCAGACCTGGAATTAAATGATGCGTCCAAGGACAAGGACAGTGCTAAGGCACTGAGCACGGGACACTGCAATGACCACGACGGGGATGTAAGCTGGCGTACTCCAGGAAGCAGGCCAGAGCCAGCAGTGACCGAGCAATTCTGCACGAGTATCAGTCACAGAATATTAGAGCTGGAAAGATTCTGAGACAGCATGTGGTCATTTTACAGATGGTCTCAATCAGTGAGTCTTCTAATATTGAAGAGAATATTGATAAAATTTTATGGAATACTCTGGAATACTTATTTATGTATCTTATAACTATTTAAACTTCATTATGTTTCACTTTCAAATACTGATAAATTCTTAGCCAATATATTAGGCTGAAACTAACTTTAAGCATAATTTATAACATTTTTAGGAAAAGATGTTTTTCAGGAGAATACAGAGAGATCTATACTAAGACTACCTAACTGCTTGTCAGTTTCTTTAAAGCTGTCAGCTCAAGTCTAACGACATGGCTTTTGCTTCCTTCCTATAAATTCTGTTCTTGAAAACCTGAGAGATAAATTCACTTGTTAATTTTGACATTGGGACCTTAATACTATCAAAATGAACTTAAGTCTGAAATGAAAACTGAGGTAGTCAGTTTTTATAAGCACTTGGCCCCTTCTGAATCAGAAAGGGACTTCAGTCTGCTATCATCAAATTAGCTATTGCCCCACCTCCCTCCACCATGGCTGCAGTCTCTCTGTGAACTGGTTTTGCAAACATAAAGGGAATCACCTGCCACAGGATACTGACATTTAGGTCATTTCAAGTTCTTCAGTTCAAAGCTGAATTACAGTCCACTAATTCTGCACTGAAATTTCAGACTTAAAAATTTTTGTTTTTAGAATATTGTTTTAGAATTTCATCATCTACTAAGTGACTAAACTATGCCTTTTAAAATTTCTTAAAGGTTCAGTCGTTTTCTAAATCTTCATTGAGTATACTATGCACAATCAGTGACAAGCAACCATTTTCAAAACTTGGTGAGGAGGAAGGAAGACACCAGCACAGTTAGTTACCCTCAAAAATTCAAGATTTCTTAACATTATACTGTATCAGATTCTACATTTGTGCAGAGGAAACACTGGGCTACCAGATACCAAGCTTAATAAATATAGATAGAAAAAATGTCATCTATAATATCTTCTTCAGAAATTCATTAGTGCAAATATAATTATATCAATAAAAATAAAGCAAAAATATATTTCAAGTATAAAAAGCACCATGCTCAGAAACAATACTACCTAAATGGGATTACTGCACAACAGTCAAAATATAACTGAACCTATCACTGTGAGTCTCAAATATATTATTAATCCGTATTATTTTTGGTAAAATTATTTATATAACTTTGCAATGATTCATAATCACATTAGGTATATATGCTTAGATTTATAACTTTCTTTAAAAATATACTCTACATTTTTCTGACTTGCATGATTTAAAGTATGCAGGACAAAGGCAGGAACACCATTATTATTAGCTCTTCTTCAGTTGAGGTTGGCTATGCTAGAGACTCCCAGCATTTCACAAAGACAAAAACCTCCAATTTAAAATTGTAGGCAGATAAGTATTTTAAATATATGCACTTAAAAAAAAGGAGGTGACTTTCCTTTATGCTGGAGTTGCTGTTTGACTCCAGTGCCAAATAGTAGGTTGGAATTATTTCTTAGTAATTATGCTGTTTGTTCACTTAGCACAATTTCTTAAACTGAATGCTTGATAACTGTATGCTGAATTAAAGGGCCAACCAATTAATGAATTAATGTTTGTTCAAGGGCTACGTTTATAATGCCATAGGACTTCACAGCTTTAGAGCTCATGAAGTTTCTTTTTTCTTTTTAAGAAAAACTGGACATCATTCATTATTAAAGAATTTCACATTGGGATTACTAAATAGGGTTGGGCAGCTCTGGTATCATGGCAGAACTGCTTCTGGGAACCAGAATCAATGGGTGACATAAAGAGTGTCAAATACAAGAGGTAAAGGACATTACAAAGCAATCTTCTGATTTCTATGGACTAAGTCATACGCTGTGTGGTAAAGTGGACCCTATCGGATAGGCTCTACACCAAACCTACACTTTACTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCATGTCCAACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATCTCCCTCTCTAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGTTCAGTAGTGTCCGACTCTTTGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCAAACCTAACAGTTTCTAAGCCAACCTAAAAATAACTGCATCCCTGTCTATACCATAATTTCTTTTTATCTTCATTTGTCAAAAAGGAAAGTTCTATTCTTGTTGGATAGCAGTTGTCATAACTATTATCTGAAAAACATATAATTAGGTTTTATTCAATTTGCATGTCTTCAATGATTCACAGGGCAGAATATTTTTCTCCCTCTGCTTCCCAGTTTTTCAAGTCATTATTAAACTAATGGAGAATACAACTGGAAGCTACTCTCTGAAGATCAGTGAGTATGGATATAGCTAGAAGAGGGCTACCAACACATAATGGTTTAGCAGGAAACTGCCACACAGCTGTTTTGAAAAAGGTTAAATCATAAGATTTAGCAAAACAAAAATTAAAAAAAAAAACTCATTAGAACAATGATTTAGGTATACGATGTACAGTCATTAAATTTAAACTAGGTATAACAGTTTATGTAGAAATCAAATTATTTTCTGTAAGTCAAAGGACAATTTATACTTTTGAGGACAGGGTCCACAACTTATAATCTTGGAACAATTAGCTGTTCTTTAAATTATTGCAGCAGAGATGAACTCTCCCATTGTTTTAGGTTAATGGAAATGCTGAGGTATGTAATCACTGAAATCTTCACCTTTTATCCCACTTTCAAAGGAAAATTTCAAGAAGGTTATATATCCTGAAATGTAAAGAGACTCGGAGACTTGGAAATCCTTCTCCTCCAAACTTTGAGGCTGCTGGGTTGCTGATGAGGAGTGACCGCTGTGAAGCTCTGCTTCAGGATCTGATTGTGGTCCACACTTCCAAGCCAAAGTCAGGAATGCCACTTCCACCATCCACACAGGCTGGCACTTGCCAGATTTTGTGCTTTGTTCAGAGGAACATGACACAAAGGAATGTCTTTAGAATTCACTTTTCCACTCCTAATGCCATACGCACAGAAGAAATCCAGCCAGCAGAGGAAACAGATTGCCTAGCAGAAGCCAGAGGGTGACCACCAGGCTAGAGGAACAGGAACAGAGATCTAGGGTTGAAAACAAAAAATTGATTTTCCATAGACATTTTTGGAAAAAACTATTGACAAATAGTTTTTTTCAATATTGACAAAATATTGACAAATGAGT EMBV3_28019 GTGGGCTGGAAGCACCACCTCTAATCACATCCCAGGATGGAGAAAGCATTTAGATTTATG Gene GeneID:614408|PLDN:NM_001076325:125_cdna UTR3_Alt 1 NULL GeneID:614408 10 GENE PLDN MGC142343 pallidin homolog (mouse) EMBV3_05683 CTGCACCTGTTCCCTGTCCTGCATGGCCAACGAGAATTATGTGGAAGGCTGGCTTAGTTT Gene GeneID:615788|CRADD:NM_001083773:49_cdna Constitutive 0 NULL GeneID:615788 5 GENE CRADD NULL CASP2 and RIPK1 domain containing adaptor with death domain EMBV3_03493 CAGAGGCAGCTCAATACTGCGCTTCCACAGGTGAGAGAGCGATTGCGAGTAGCGCTCGAA Variant GeneID:100139635|PPFIA1:XM_002699424:95_cdna 265^531 1 EMBV3_42973 GeneID:100139635 29 GENE PPFIA1 NULL protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 EMBV3_06740 AAAGGTCATTTCTGCAGCTGACCAGGAACACCCCTGCAATCCAGTCACACGGCTACAGGT Gene BVV0102_302798 + 0 NULL GK000018.2:65967277-65971422 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087812 TCONS_00087813 1 XLOC_052604 Coding TCONS_00087812 XLOC_052604 Coding Coding MZF1 18:65969084-65978219 j TSS65160 4153 1 TCONS_00087812_1 473 4 0.545763082986643 9.32704115086562e-08 0.000193564012197088 8.89351989227636e-10 8.19764323406925e-05 1.18877552577259e-05 0.000296355150854047 4.35300954450497e-05 4.13013893056401e-05 3.09795694002418e-05 1.96038522017688e-05 6.5594060962945e-05 4.30490260415192e-05 3.34568306049085e-24 2.87071926881605e-14 3.35670121361192e-05 0.000401386896385269 8.59237469149388e-11 1.4493196645144e-05 4.83466550832829e-05 0.000322257686755367 2.92362882435681e-06 4.13189013202797e-11 5.39965824760185e-06 6.72059213521168e-05 3.51042055888754e-09 0.000137085500557173 7.41715418193665e-06 7.6322362117956e-05 1.56042055125935e-05 7.51353157997735e-05 XM_005219787.1 MZF1 PREDICTED: Bos taurus myeloid zinc finger 1 (MZF1), transcript 0.0 3227 100.00 0.430532145437033 NM_003422.2 MZF1 Homo sapiens myeloid zinc finger 1 (MZF1), transcript variant 1, 0.0 1806 85.86 0.372020226342403 TCONS_00087812_1 sp|P28698|MZF1_HUMAN MZF1_HUMAN Myeloid zinc finger 1; 0.0 737 87.34 0.997885835095137 9 coding 0 0 0 0 -0.167326890763531 0.267945988161249 -0.112407793034229 0.0839552984421589 CCCGAGAGCCCCCTGCCACGCCAGCTCCAGAGCCACTGCATCCTCGGCCTCTAAGCAGCCTGCAGGGGACCCCTTTCACTCTGCTCCCCGACCAGGCCCGGGACTGTGTCGTGGTGCTGGACCAGGCCTCCCCGCATAGTGAGCCTGGGCCTGAGGTTTCCTCCTGGAGGCAGCACCGTGGGGCCCTGTGGCAGGAGGAAGCTGGGGGCATCTTCTCCCCAGGGTTTACACTCCAGATGGACAACGTCTCTGTGGACCCTGACATCATGAGTGCCCACGTCCACCTGCCCTGGGACCTCGGCGAGGCCAGCCTCACAGGCCGACTCGAGTCAGCCTCCCGTGAAGGTGGCTTTTCACAAGCGCTAGTGCCCTCCAGCGACCTGAGAGGTGAGCCGGACCCCACGGAGGATACCTGCCAGGGCCTGAGCCACGGGCTGGGCGCGGCGAGCTGGCGTGCCCCCAGGGGTCGCAGCCGGGCTCGGGGGCGCCCCGGCACAGGGGCCGGAGCTGAGCGAGGGGGCCGCTGTGACGTGTGCGGGAAGGTGTTCAGCCAGCGCAGCAACCTGCTGCGGCACCAGAAGATCCATACCGGGGAGCGGCCCTTCGTGTGCGGCGAGTGCGGCCGCAGCTTCAGCCGCAGCTCACACCTGCTGCGCCACCAGCTCACGCACACAGAGGAGCGACCCTTCGTGTGCGCCGACTGCGGCCAGGGCTTCGTCCGCAGCGGGCGCCTGGAGGAGCACCGGCGCGTGCACACAGGCGAGCAGCCCTTCCGCTGCGCCGAGTGCGGCCAGAGCTTCCGCCAGCGCTCCAACCTGCTACAGCACCAGCGCATCCACGGCGACCCGCCCGGCCCCAGCGCCGCGCCCCCCGCCCCTCCCGGCGCGCCCGAGCCCCCCGGCCCCTTCCCGTGCAGCGAGTGCCGCCAGAGCTTCGCGCGGCGCGCCGTGCTGTTGGAGCACCAGGCGGTGCACACGGGCGACAAGTGCTTCGGCTGCGCCGAGTGCGGGGAGCGCTTCGGCCGCCGAACGGTGCTGCTGCAGCACCGGCGCGTGCACAGCGGCGAGCGGCCCTTCCGGTGCGCCGAGTGCGGCCAGAGCTTCCGCCAGCGTTCCAACCTCACGCAGCACCGGCGTATCCACACGGGCGAGCGGCCCTTCACCTGCGCCGAGTGCGGCAAGGCCTTCCGCCAGCGGCCCACGCTCACGCAGCACCTGCGCGTGCACACGGGCGAGAAGCCCTTCGCCTGCCCCGAGTGCGGCCAGCGCTTCAGCCAGCGCCTGAAGCTCACGCGCCACCAGCGGACGCACACGGGCGAGAAGCCCTACCGCTGCCGCGAGTGCGGCCTGGGCTTCACGCAAGTCTCCCGGCTCACCGAGCACCAGCGCATCCACACGGGCGAGCGGCCCTTCGCCTGCCCCGAGTGTGGCCAGCGCTTCCGGCAGCACGCCAACCTCACGCAGCACCGGCGCATCCACACGGGCGAGCGGCCGTACGCCTGCCCTGAGTGCGGCAAGGCCTTCCGCCAGCGGCCCACGCTCACACAGCACCTGCGCACCCACCGGCGCGAGAAGCCCTTCGCCTGCCAGGACTGCGGCCGCCGCTTCCACCAGAGCACCAAGCTCATTCAGCACCAGCGCGTGCACAGTGCAGAGTAGCCAGAGCAGGCGGCCCCACCATTATCCACAGTTGGGGGCGGGGTGTGTGTGGAACACCTACCTCATGGGGTTGCATGAGATCGCGTGGGTACAAGCCAGCTCTCTTAGGGGCCGGCTCCCAGTAGGTGCTCAATAAACAATGCACATTATCTCCGTCTGGGTCTGCACCCACTCAGTGTCTGCCTACCTGCCTGGACCCCTCTCAGCCCTCACTACAGGTCTACCACCTTCTCTGTAACCACGTGGCTCCTGCAAGACCCAGGGCTCCCGGCAGATGTGGCCCCTAGCAGGGCCTGCCCACGTCTGCAGGACGTCCCCTCACAGCGTGGCTCCTGTACTATTTGCTTTCGACCCACCACTCTGCCCGCCAAGTCAACGACCAGGAGAGGACCCCGGAGGGCACAGCCCTGCCAACCAGCCAAGATAATTGGGTGCTAAAGCATCAAATGGGTGCCCATTCGGCCACCGCCAGCCTGAGTTTGTGTGTTTATAAAACCGAGGAGGCCATATCTTAGCTGTAAAAGCTGTAAGGTTTTAAGTGGGAATCTAGTCTTAGGAGACTTTCCTCTGTTCCCGCAGACTCCAGCTGGTCTGAGAACCAAAGCTGGCAGCAAGGCCAGGCCAGTTCCCCAGCCCTCCAGGTGCTGTCGTAGGCTGTTCTCTTCCCTCCCTGGCCCCAGGCACAACCCCTAAGTACCCCCCAACTGGAAGGTCTCTATCATGTGTGTTTGGTAACTAGTCACAGGACACACCACCTGCTGACATACAGGTGGACAGACATTGGCAGCTCCAAGTCAGAGTTCTGCAGACTTTAGGGCAGGACCTCTGGACCCCTCCCTCCTTTTCCTGTGCCACTGCTGCTTTTGCCCTGTCCTCCCCTTCCATCCTACCGCTGGGGCCTTAACACAGCCCCCAACTCCCCCACTGAATGGCGGAAGTACCAGAGACCGTGGGTGAAAGGCAGTTCCAAAAAGGGGATCTTCATGCAGCAGGGTCTGGCTTGGGACTTAAACCTCACCCTAGGCTGGTGTCAGCCTGATCTTGGTCTAGAGGTCTCAAGGGTTCTAGGAACAGCCCTTCCAGAAGGAAACCTGCAATTTCACCTGCCACTTTGAGTCACCCCAGTCCCTACAAGACTTGGGCCCTGGTATCAGGAAAAAACAAGCAGCCTGGGCCAGAGGCTTCCTATCAATATGGGAAAGGAGGCCTGCTCCAAGCCTCAGCCCCCCTCCTCCCCAACTCTACCCCTCTCCTTCCCCATCCCTGCTAGTCTTGCCCCAGCCACAACCAGAGCCATTCTTGGCATCTACTACATCCGGCAAGGTCAGCCACTCCCCCAGGCAGGGGCACTCCTGTGTGGCATGATCAGGACTGAACGGGGGGGTGTGGGGGGGGGGTGTCCCTGGGCCCTTTGACAGCACTCAGTTCTCTGGTCACAAAGGGTTCTGAGTAACCTGGTGTGGGACATGTACAATCAGAGGGAAGAGGAAGACAGGGAGGGGCTGAAGAATCAGATCAGGGAAGACACACAAATGAACACAAGTAGCCAGTAGCTAGTGGTCTCAGGTTGGAGTGTCGCAGGAACTTTATAAAATCCTGTAATGTGGATTTTTTTTTTTTAACGACTTGTGTGACTTATAATCTGAAACAAAGAAAACTCATCTTTGGTCATCTTTGTGTTCATCATGAAATCTGTGCAAATACAACTACATAAAAACATGAAATTCCACACAGGAAAAATTACAACAAACGTGAAAAGCACAGAGACATCCGGATGGGACCTCACACCCAAATCTTTGAGAAGTCCAGGGATCCACCTCCCAAAACAGCCCTCTGGGAAGACGTCAACGTGAACAGCTATGTGAGGGCCACCCATGAAAGGTCATTTCTGCAGCTGACCAGGAACACCTCTGCAATCCAGTCACACGGCTACAGGTCAAGACCCAAGTGTTACTGCGCAATCAAGACTGAGGGCTTGGACAGAATGACCATTTGGCCAGAGCCATAGAAGAACCCAGGAGAGAAATACACAAGCACTGGTCATCTAAGAAAGTTACAACAGTGCCTAGCCAACCTGTCCCCAGACTGTCTGTATCCGAGTTCATACTGTCCACTCCCAAGCCCAGCCGGCTGCCCCATGCCACATCTATCTAGTTATTCTCATCAGCACCCCAGCCTCCCAAATTTATCCACTGTCTCCACCCATCAGCACTGCTCTGATTCCAACCATCCACCTCTAGCCTGGAGGCCCACAGCACTCAGCCTCCCTGCCCTGCCCACCCCTGCTCCCTCATTCCCTGGACAGACCCTTTCTTCCCAGCGTCAGGACCAGAGGCTAGGCTAACAATTGTAGGTGCACTTTCACCCTCACAACCCACTCACCAGGTTCTGCCCGGTCCTCTGCCTGGTCCCTCCACAGCACTGGCCCCAGCTTCCCTCAGGGCCTTTGCACGTATTAAGCCCTGTGCTGCCTACCAACAGGTGGCAGGACCAAG EMBV3_31441 CTATGTGGCTGTCTGCAAGCCCCTTCACTACTCTACCCTCATGACCCAGAGGATTTGTGT Gene GeneID:100140912|LOC100140912:XM_002693145:52_cdna Constitutive 0 NULL GeneID:100140912 15 GENE LOC100140912 NULL similar to olfactory receptor 710 EMBV3_37694 GCGTTCCCTCAGACCCCAAGGTACATGGACGTGTTTAATGACACCTCTCTCCACTGGTTT Gene GeneID:615429|SRRD:XM_002694603:113_cdna Constitutive 0 NULL GeneID:615429 17 GENE SRRD NULL SRR1 domain containing EMBV3_36279 TCTCAATAACATGGACTCAATAGCTGAATGTGGCTCAGACAAAGCATCTGTCTCTCCGTC Gene BVV0102_078966 + 0 NULL GK000019.2:37479633-37502275 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41506 TATCAAATACAAGTTGGCAGGAAGGTGAGCTGACAGGATCAGGGCCTGGCTTCAGTATGC Gene BVT0102_331965 + 0 NULL GK000015.2:76578094-76725254 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060079 TCONS_00060080 TCONS_00060082 TCONS_00060081 1 XLOC_036577 NonCoding TCONS_00060080 XLOC_036577 NonCoding NonCoding LOC100847913 15:76649782-76651854 j TSS44961 539 2 TCONS_00060080_2 45 3 0.741187831965234 0.00068051090176406 2.46944313968911e-06 0.00204802691664649 0.000338942934578271 5.557488239603e-09 3.68989685440243e-09 0.000183893202352599 0.00024141646715139 0 1.07600530914444e-06 5.86770273172521e-07 8.00800895796587e-06 0 0 1.26768831740932e-08 0 1.19190516265387e-08 0 1.55416844319817e-06 0.000730396172339914 2.87591042470736e-09 0 0.000450894713384121 2.45558466651152e-06 0.000922310651866717 1.26962443385639e-10 0.00272545336570219 0 0 0 XR_227931.1 LOC101907451 PREDICTED: Bos taurus uncharacterized LOC101907451 (LOC101907451), 1e-34 150 100.00 0.152133580705009 NR_047569.1 LOC100507384 Homo sapiens uncharacterized LOC100507384 (LOC100507384), 1e-59 233 72.21 0.844155844155844 0 noncoding 1 1 1 1 -0.0217329573663333 0.847559229613868 0.0380805050893634 0.528176690160712 TCCCTGACTTTCTGATGCCAGAGGTGGCCCTGCTGTTCTCGTCTGCAACTTGTAACTGTTCGTGCCTGCGCATCATAGGCAGAAGCTGACAATGACCCTTGGGCTTTTCCAGTGGTTACCACAACACCATTTCCTGCCGCCTGGAGGGAAGACAGAGTAATTGTTGGCAGCAAGAGAGTGGAACCTGGAGACGATGTGGGCATGCTGATTTTCAAAGGAAAAGATCTGAGCCTCCGCCTTAAGAGGCAGACTCACCCTCTCCAACCTAGCGAGGGTGAATGTTGCCCCCCAGCTCCTCAGACACCCGCTTGGTACTAGGCTTGTTCTCCAGGCTTACTAGAAGAGTACCCCTTACTCTAACCCAACATCCTCAATGATTATCACCCCTGCCTCCTACCTCCCATGTCCACCCCTATGGCAGGGCCCCCACAGAAGCAAAACATAGTCACCTTAGACTCTGGCATACTGAAGCCAGGCCCTGATCCTGTCAGCTCACCTTCCTGCCAACTTGTATTTAATAAAAATATTGTTAAATGGTA EMBV3_37612 TGGCTGTTGGGGAACTTCTACGGCACTTCTGGTCCTGTTTTCCTGTTAATACACCATTCC Gene GeneID:513510|GTF2H1:NM_001046150:22_cdna UTR3_Alt 2 NULL GeneID:513510 29 GENE GTF2H1 MGC128582 general transcription factor IIH, polypeptide 1, 62kDa EMBV3_12681 TTGTCCCAAGGCCTTCCCGTACCGTCCAGGAGGGCAAGTGTCCAGAGGATGGTTGGGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38278 GAGAGACCCACCTTCGAGTACCTGCAGTCCTTCCTTGAGGACTATTTCACCTCCACAGAA Gene GeneID:516133|FGR:NM_001098991:176_cdna Constitutive 0 NULL GeneID:516133 2 GENE FGR MGC159776 Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog EMBV3_29758 AATGGTGTCATCAGCAAGATCTGTGTGGCCATTGCTTTCCGATGCCTGGGTCTCCACCTG Gene GeneID:788872|LOC788872:XM_002693230:470_cdna Constitutive 0 NULL GeneID:788872 15 GENE LOC788872 NULL similar to olfactory receptor 49 (predicted) EMBV3_21243 GCAGCCGCCCAACGTGTACCTGGAGACCAGGTCGAGGTGGTGCGTCTATCTATGGCAAGC Variant GeneID:508179|PPIL1:NM_001014869:20_cdna 59^213 1 EMBV3_15710 GeneID:508179 23 GENE PPIL1 NULL peptidylprolyl isomerase (cyclophilin)-like 1 EMBV3_26665 TATGGACCAACCGTTAGTTGAACATTTCAGTAATCTTGCTCAGAACACAAATTTACTGCG Variant GeneID:519018|SKP2:NM_001102052:27_cdna 721^855 3 EMBV3_01563 GeneID:519018 20 GENE SKP2 MGC152600 S-phase kinase-associated protein 2 (p45) EMBV3_38495 AGCAATGCTGGCCTCAGGTTCGAGGTGGTCCCGTCCAGGTTCAAGGAGAAGCTGCACAAG Gene GeneID:508458|ASMTL:NM_001035058:19_cdna Constitutive 0 NULL GeneID:508458 X GENE ASMTL MGC128225 acetylserotonin O-methyltransferase-like EMBV3_23109 TGGCAGTCATCTCCACAATAAGTCAGTCCTGGATTTGCTGGAAGAAAGAGCCCCTGGACT Gene BVT0101_041054 - 0 NULL GK000026.2:33942738-34304684 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152177 TCONS_00152178 1 XLOC_092272 NonCoding TCONS_00152177 XLOC_092272 NonCoding NonCoding - 26:34259190-34261353 - TSS113554 2032 1 TCONS_00152177_3 101 2 0.061054579093432 0.000352382351175333 0.00023736413419194 0.00024621914694446 0.000148863627902655 1.19574525452308e-09 1.5629540034789e-12 6.28510883716066e-05 8.38546253149394e-05 8.67999866248586e-05 1.02489308046245e-09 0 0 6.74181670298001e-10 1.07689007960266e-09 1.03413902363038e-09 0 0 0 0.000300690430259722 0.000304750441857291 2.53973223072022e-05 0 0 0 8.00520364229772e-05 0.000550958441381415 0.000375315576387183 0 0 0 0 noncoding 0 0 0 0 -0.0443416041269943 0.725045977668297 -0.0132426694217824 0.790409493143142 CAGGAATCTGTGCCCCAGAGGGGGCCGTGTCAGCCAAGTGACTCGCAAGGAAGGGGCAGTTCCAGCCTGGGAGAGGGGCTCCCAACTGGTAGAAGACCGATCCAGCATCTTCTGACGGATTCAGAAATTACTTCCAAGTCTTTCTCCTATATTGCCTTTCTACTCATTGTCAGGGGTTAGCATTGTGGAAACAGGTGGTCCAGTGAGTTTTCGAGCTATTTGGGTTGTAAATGGAGTTCAGTATCGTAAAACCAAACGAACACTAGAAAGTGGCATAATGTAGTGGGCTGGGCACTCTACTCGGAAGAGACACATCTTTTCTGACTTAAGTTCTGTTAATAATTCACTTAGGGAAGGGGTTGGAGGTCTTGTTCCCCATCTGCCACTAACTGGCTCTCTGATTCCAATTTCTCTCCATTTTCTCATCTGTGTAAGAGGGAAGGGATACATTGGATGAGTTGGTCAGGAAGGGCACTTCTGCCTTGAGAAAAATGTTGGTTTTAGGGCACATACGTAGTACGTCTCTCCCCATCCTGCCAGGGGAAGATCATCTTGGAATTAGTGAATAAATTAGAAGGACATGTCTGATCTCAACTGGACCTCTGCAGGAACTTGCATTTCACTTACAGTGTACTTGTGTTCCAGGGGGTATCAAACCAAGTCCAGGGGCTCTTTCTTCCAGCAAATCCAGGACTGACTTATTGTGGAGATGACTGCCAGGTGACAACACTGGGACACCTTCAGAGGAGGGGGTCGGTGGTGACTCCAAACCTCACCAGGGATCCCGGCTTGCCACGGCCTCCACATCCAGTGACAACAGAAAAGGACGCGCACAGAAAGGAGCGGTCAGCGTTTTGCTGACTGCCCTTCCTTCTTCAAGCCCGTTAGAGAAGTCCGACCGCAGGTCCGTAGACAGGGCACCTCCACCGCTAATGCCCCGCCACTCAGGGAGCAGGACAGGGAGGCAGTGGGGAGGCCGCCCCCTCTTCTTCCACCATCGGAGCCCAAAGCCATCCTCCATCATGCCTTCTTTTCCAGTCTGCATCTGCACATCAACCCCCATCCCTGGTCCCTGACACACAATACTGAATAAATATGCCTGGCCCGGGTCCATGTGGGAATTCTGGAGAGTTACGATTGTTATTTCCAGGAATGCACAGACACCAGCAAAAATTCATTTCCCAGACGCATGGCTATTTTGAGAACCAAATCTCCTGCTCTGTAGCAATCAAATTGGGGGCTTTTCAAGTCTTGCTTTACAATAGAAACCTGTTCTGCCTTCAGCTGCCTTTTACCTACAAGAATTCAATAAGAGAGAGAGAAGCCATTAGAGTTTCCTTCCCCGTCTCCGCTTTGGCGCGACATATATTCCTGGCCAACTTTCTCGACTCTACATCTTAGTAAATTCTTCCTGACAATAGTTAGTGACAAGCATGTCAGAAGCAACAAACTCCGTCATCTATAGGGCTTATCAATAATTTAGTCTCTTCCCCCTCGTGAGAGCCTGTGTGTTTTGCAATAATGAAATATATGATTTTAAAAATAAATAATAGGCTGTTGTCAGCCCGATTGTAGCTGCAAGTTATGAATGTGATTGATTGATTGAACATTTGACTTCATCCGCTCGAGCAGGATCAAAGAGAGACTCTTCCACCCGCCTAAGGCCACTAGCAATTTATTTAGAGACTGTGTTCGTATCCCAGCAGGTAGCAATATCGGACTGAGGTACACAGAAAATCAGCTCTTTGAAATTTTTTCCAAGTCCGAGGGAAGCAACAAATGAGATTTTTTTTTTCTTAGTTCATTAAATCATTAACCACTTAATCACTAAAACAAGACATGATAAGCATTCCCTTTAGCTGGGTTACCCAGGACAAAAAGAAATGAGGCTTTGCTGAGATCTAGTGTTGGAAGGTGGGCCCTTTTTACACAACGTGACAGTCTCTGATTTTTTATTTATATGGCGCTGTATTTTTTTTCTTCATCTTAACTAATCAGCATGGCAACAGCCACAATGACATCCAGAAGTGAC TCONS_00150882 r 5' 44124 TCONS_00150882 r 5' 43332 EMBV3_00932 TCCAGCAGAGACCACGACAGCTTTGAGGCAAGCAAAGGTCCTGGGTCAGAATCGAGTGGA Gene GeneID:617306|LOC617306:XR_083930:878_cdna Constitutive 0 NULL GeneID:617306 18 PSEUDO LOC617306 NULL similar to Coiled-coil domain-containing protein 114 EMBV3_03714 CCTGTGTGTACTTTCACCCACGTTCAGAAGCGTCTCCTTTGGTGTGAAGTCTGACTCGTT Gene GeneID:281509|SVIL:NM_174190:7_cdna Constitutive 1 NULL GeneID:281509 13 GENE SVIL NULL supervillin EMBV3_19607 GTTACGCCTTCAACACAGAACACGGGGGTCAACAACCAATCACTAGGCTGGCTTAGGACA Gene GeneID:513967|ALDH3A2:NM_001101984:30_cdna UTR3_Alt 3 NULL GeneID:513967 19 GENE ALDH3A2 MGC166026 aldehyde dehydrogenase 3 family, member A2 EMBV3_22087 GCCTCATTGGCAACCTGGGTGCTTTCATGGGTGGACCACGCTAAGTCTCTGCACTATGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25953 AGCTGAACGCCTCACAGGACTTGGGGCTAGCTTGAGAAAACAGGCTCACGAAAGCAGAGA Gene BVV0102_224065 + 0 NULL GK000023.2:10848750-10854190 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21009 AATGATGTGCTGGTAAATCACTCTCCTGGTGGGGAGGAAGTTCTGATTTGTAGCATTTGC Gene GeneID:281863|IL8RB:NM_174360:23_cdna Constitutive 0 NULL GeneID:281863 2 GENE IL8RB IL8RA IL8RB interleukin 8 receptor, beta EMBV3_25163 AGAACAGGAGAAGGAAGCTCCTGGTAAATCCCAGGTTAGTCTGAGAGAAGCCCTTCACAG Gene GeneID:100295889|LOC100295889:XM_002700154:42_cdna Constitutive 0 NULL GeneID:100295889 X GENE LOC100295889 NULL hypothetical protein LOC100295889 EMBV3_19844 ATCAGTGGCTTTGTGGGGTCCACTGTTCAGACCATCCTTGTTTTCCAGTTGCCTCTCTGC Gene GeneID:618064|LOC618064:XM_002697417:124_cdna Constitutive 0 NULL GeneID:618064 23 GENE LOC618064 NULL similar to olfactory receptor Olr1750 EMBV3_27213 ACAAATATAGTGCCTTCCCATGAAACCTCCGACCTTCTTCGTGGCTCAGCAAGGTTTAGC Gene GeneID:513129|LOC513129:XM_002692069:175_cdna UTR3_Alt 2 NULL GeneID:513129 13 GENE LOC513129 NULL hypothetical LOC513129 EMBV3_33999 GAGGAGCCTTCCACCAAAAGGGAGCATCAGGTTGGGTCCCAGTGGAGAAAAACAGCAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17262 CGGAGAACCTGAATGAAGAAGAGAAACTCAACAACGCAAAGTATGCCATCTCTATGGCCC Gene GeneID:540990|LCP1:NM_001034720:184_cdna Constitutive 0 NULL GeneID:540990 12 GENE LCP1 MGC128288 lymphocyte cytosolic protein 1 (L-plastin) EMBV3_14847 GAAGCCTGCATGCCCCCTCGACACAGACAGGCCAAGTACTTGACCAAGAAAACCCAGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02026 AACTGGGTGGTTGTCGAGGGACTGAATACAGAAACCCACTGAAGTGGAGTGGAGATTCAC Variant GeneID:532203|MRPL24:NM_001034576:165_cdna 372^475 1 EMBV3_41664 GeneID:532203 3 GENE MRPL24 MGC127920 mitochondrial ribosomal protein L24 EMBV3_14424 AATGCATGAAACCACCTTTAATCATCCAAGATGATGAGGTTTTTTTTCCTCACCACCCTC Gene GeneID:535254|POGZ:NM_001163190:130_cdna Constitutive 3 NULL GeneID:535254 3 GENE POGZ NULL pogo transposable element with ZNF domain EMBV3_30519 TTAGTTGCTGTGGGACTGTGTTTCTTTTTGCTTCTTCTGTCTGCCCTCTGATGGAGGAGG Gene BVT0101_022675 - 1 EMBV3_11318 GK000010.2:38447566-38473474 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20497 TCAAACCTGTGACCTGCATTAGCAGGTGGATTCTTTACCACTGAGCCGCCATGGAAGTCC Gene BVV0102_118780 + 0 NULL GK000005.2:116210372-116316366 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07485 GAGGGTGTTAGTGATTTCTAATCCTTCTGTCCTTAAATGCCTCCTTGGGGCAAGAGTTGT Gene GeneID:506063|ULK3:XM_002696634:179_cdna Constitutive 0 NULL GeneID:506063 21 GENE ULK3 MGC137117 unc-51-like kinase 3 (C. elegans) EMBV3_16629 AGGAAGACCCCACCAACTGGCTACGCTGCTATTACTATGAGGACACCATCAGCACCATCA Gene GeneID:507859|NCF4:NM_001045983:182_cdna Constitutive 0 NULL GeneID:507859 5 GENE NCF4 MGC138034 neutrophil cytosolic factor 4, 40kDa EMBV3_27591 GCCAATATACTGTCCCATGCCTACTGCCTTCATCCAGATCTCATCCATCTTCCCTGTGGT Gene GeneID:615276|LOC615276:XM_002693214:423_cdna Constitutive 0 NULL GeneID:615276 15 GENE LOC615276 NULL similar to olfactory receptor Olr145 EMBV3_41598 ATCCACTGCACTACACCACCATCCTCACCAACAGTGTAATAGGCAAGGTTGGTTTGGCCT Gene GeneID:788739|LOC788739:XM_002693240:500_cdna Constitutive 0 NULL GeneID:788739 15 GENE LOC788739 NULL similar to Olfactory receptor 51L1 EMBV3_23586 GAGGCAGTATTTATGCAGTATTTAACAAAACACTATGCTGCCAATAGAGCTTAGAGGTGG Gene GeneID:526026|ZNF711:XM_002699948:34_cdna UTR3_Alt 2 NULL GeneID:526026 X GENE ZNF711 NULL zinc finger protein 711 EMBV3_01236 TCAGTTCTGACTGTAGGGAAAGAAGTTCTGGGCTACAACACACAGTGATCTTATTCTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13432 CAGCAGTGCTTGGGACATGGTAGACTCTTCACAAGGGAGACCAGTGCATGTGTTTGCTTG Gene BVT0102_277111 - 1 EMBV3_07075 GK000021.2:25816372-25913770 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43448 GGAGTCCATTGCTGCAGTCTCCTTGGTTAGTTAAGACAAAGCCCTCATTAACGTTTGCTG Gene GeneID:527053|NPAS3:XM_002696720:138_cdna Constitutive 0 NULL GeneID:527053 21 GENE NPAS3 NULL neuronal PAS domain protein 3 EMBV3_43792 AATGGATCCAAGTTCGAAATATGGCAACTTTGAAATGATTGACAAGTTGACTCTGACATT Variant GeneID:327668|ATP5C1:NM_001075136:2_cdna 114^825 2 EMBV3_21617 GeneID:327668 13 GENE ATP5C1 NULL ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 EMBV3_37458 GCCCCAGCGGCCTGCGATTTTGGTCTTAGTTTTTCTTTTATATTACCCACCGCCCCTTTC Gene GeneID:523720|NTNG2:NM_001099025:115_cdna Constitutive 0 NULL GeneID:523720 11 GENE NTNG2 MGC151681 netrin G2 EMBV3_33135 TAATATGGGCGGCAGCTTTCCATAAGTGTGAGCCATTCTCATTAGGTGCCCTGGCCCAAA Gene BVT0102_251674 - 0 NULL GK000005.2:26686846-26695586 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40320 GCAGGTGGGCAATATGACCAAGCCTACCACAATCATCGAAGTGAATGGGGACACAGTCAT Gene GeneID:281758|FABP3:NM_174313:37_cdna Constitutive 0 NULL GeneID:281758 2 GENE FABP3 FABP FABP-3 H-FABP fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) EMBV3_39559 AGCAACCATTTTTTATACCACGAGGAAGGAACCGGTGCTCAAGGTCATTGTGAAGCTGCC Gene BVT0102_078149 + 0 NULL GK000006.2:116999128-117727459 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25657 GTGATCCTTTGAGGCACACAACCACCCTTACACCTTTCCTCCTGGTTAGTATGGTGCTGG Gene GeneID:519176|LOC519176:XM_002693360:301_cdna Constitutive 0 NULL GeneID:519176 15 GENE LOC519176 NULL similar to olfactory receptor 598 EMBV3_27629 GAGGACCACGAGGACTTCTCCAAGATAACACTACTTCCCTTCACTTAACCCGCACCACCA Gene BVT0102_273919 + 0 NULL GK000027.2:24743395-24801706 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155280 TCONS_00155278 TCONS_00155283 TCONS_00155281 1 XLOC_094685 Coding TCONS_00155280 XLOC_094685 Coding Coding TNKS 27:24632929-24794642 = TSS116213 9534 1 TCONS_00155280_5 1327 0.0195091252359975 27 0.941210299792223 0.000562423385333878 1.03014267080429e-07 0.000413500673735106 0.000170712367904086 3.75381445680336e-08 7.72325593273954e-05 2.66843112529465e-06 8.76000676870822e-08 0.00052456684282808 2.13375568618884e-07 3.26409859279512e-08 6.1553561843178e-06 8.43574434241369e-09 5.59437868720948e-06 1.12028026010013e-08 0.00313412597279604 1.50508596685693e-07 6.11990203569409e-07 0.000438231210230761 0.000105167626313049 2.23798934624263e-12 0.000418670126978424 0.00033295665875608 0.00104439411958453 0.000785338869744508 0.000574005768307638 1.04854910118341e-05 4.59059781619564e-05 3.6673280182738e-08 0.000346348104920044 NM_001206160.1 TNKS Bos taurus tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase (TNKS), mRNA. 0.0 8064 99.96 0.469372771134886 NM_003747.2 TNKS Homo sapiens tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase (TNKS), mRNA. 0.0 9268 81.69 0.998846234529054 TCONS_00155280_5 sp|O95271|TNKS1_HUMAN TNKS1_HUMAN Tankyrase-1; 0.0 2700 98.87 0.999246420497362 8 coding 0 0 0 0 -0.00242049853094151 0.987701966447493 -0.0152618459969125 0.749801543395302 ATGGCGGCGTCGCGTCGCTCTCAGCATCATCACCACCATCATCAACAACAGCTCCAGCCCGCCCCAGGGGCTTCGGCGCCGCCGCCGCCACCTCCCCTCCCACTCAGCCCGGGCCTGGCCCCTGGGACCACCCCGGCCTCCCCTACGGTGGGCGGCCTGGCTCCGTTCGCCTCCCCGAGGCACGGCCTAGCGCTGCCGGAGGGGGATGGCAGTCGGGATCCGCCCGACAGGCCCCGATCCCCGGACCCGGTTGACAGTGCCAGCTGTTGCAGTCCCACGAGCACAATCTGTACGGTCGCCGCCGCTCCGGTGGTCCCGGCGGTTTCTGCCTCATCTGCCGTCGGGGTCGCTCCCAACCCAGCCGGCGGCGGCAGTAACAATTCACCGTCGTCCTCTTCTTCCCCGACTTCTTCCTCCTCTTCCTCTCCATCCTCCCCCGGATCGAGCTTGGCGGAGAGCCCCGAGGCGGCCGGAGTTAGCACCACAGCACCATTGGGGCCTGGGGCTGCGGGCCCGGGGCCAGGGGTCCCAGCAGTGAGCGGGGCCCTGCGGGAACTGCTGGAGGCCTGTCGCAATGGGGACGTGTCCCGGGTAAAGAGGCTGGTGGACGCGGCAAACGTGAATGCTAAGGACATGGCCGGCCGGAAGTCTTCTCCCCTGCACTTCGCTGCAGGTTTTGGAAGAAAGGACGTGGTAGAACACTTACTACAGATGGGTGCTAATGTCCATGCTCGTGATGATGGCGGTCTCATTCCACTTCATAATGCGTGTTCTTTTGGCCATGCTGAGGTTGTAAGTCTGTTACTGTGCCAAGGAGCTGATCCAAATGCCAGGGATAACTGGAACTATACCCCTCTGCATGAAGCTGCTATAAAAGGAAAGATCGATGTATGTATTGTGCTGCTGCAGCACGGAGCTGATCCAAACATTCGGAACACCGATGGGAAGTCAGCCCTGGACCTGGCAGATCCTTCAGCCAAAGCCGTCCTTACAGGTGAATACAAGAAAGACGAACTCCTAGAAGCTGCTAGGAGTGGTAATGAAGAAAAACTAATGGCTTTACTGACTCCTCTAAATGTGAATTGCCATGCAAGTGATGGGCGAAAGTCAACTCCTTTACATCTAGCAGCAGGCTACAACCGAGTTCGGATCGTTCAGCTTCTTCTCCAGCATGGTGCTGATGTGCATGCAAAAGACAAAGGCGGACTTGTGCCTCTTCATAATGCGTGTTCATATGGACATTATGAAGTCACAGAACTGCTACTAAAGCACGGAGCTTGTGTTAATGCTATGGATCTGTGGCAGTTTACCCCGCTTCACGAGGCCGCTTCCAAGAATCGCGTAGAGGTCTGCTCTCTGTTACTTAGCCATGGTGCTGATCCCACTCTAGTCAACTGCCACGGCAAAAGCGCAGTAGACATGGCTCCAACCCCTGAGCTCCGGGAGAGATTGACTTATGAATTTAAAGGTCACTCTTTGCTACAAGCAGCCAGAGAAGCAGACCTAGCCAAAGTTAAAAAAACACTTGCTCTGGAAATCATTAATTTCAAACAGCCACAGTCTCATGAAACTGCACTGCACTGTGCTGTGGCCTCGCTGCATCCCAAACGCAAACAAGTGACAGAATTGTTACTTCGAAAAGGAGCAAATGTTAATGAGAAAAATAAAGATTTCATGACTCCCCTGCACGTTGCGGCAGAGAGAGCCCACAATGATGTCATGGAAGTTCTGCATAAACACGGAGCAAAGATGAATGCACTGGACACCCTTGGTCAGACCGCTTTGCATAGAGCTGCCCTTGCTGGTCATCTGCAGACATGCCGCCTGCTGCTGAGTTACGGCTCTGATCCCTCCATCATCTCCTTACAAGGCTTTACAGCAGCACAGATGGGGAACGAGGCCGTGCAGCAGATTCTGAGTGAAAGTACACCTATACGCACTTCTGACGTTGACTATCGACTCTTAGAAGCATCTAAAGCCGGAGACTTGGAAACTGTGAAGCAACTTTGCAGCCCTCAGAATGTGAATTGCAGAGATTTAGAGGGCCGGCATTCCACGCCCTTACACTTCGCGGCAGGCTATAACCGTGTGTCTGTCGTGGAGTACCTCCTCCACCATGGTGCCGATGTCCATGCCAAAGACAAAGGTGGCTTGGTGCCCCTTCATAATGCTTGTTCATACGGACACTACGAAGTAGCTGAGCTCTTGGTAAGACACGGGGCTTCTGTCAATGTGGCGGACTTATGGAAATTTACCCCTCTACATGAAGCAGCAGCTAAAGGAAAATATGAAATCTGCAAGCTCCTTTTAAAACATGGAGCAGACCCCACTAAAAAGAACAGAGACGGAAATACGCCTTTAGATTTGGTGAAAGAAGGAGACACAGATATTCAAGACTTGCTGAGAGGAGATGCTGCTTTGTTGGATGCTGCCAAGAAGGGCTGCCTGGCGAGAGTGCAAAAGCTCTGTACCCCGGAGAATATCAACTGCAGAGACACCCAGGGCAGGAACTCCACCCCTCTGCACCTGGCAGCAGGCTACAATAACCTGGAAGTAGCGGAGTATCTTCTAGAGCACGGAGCAGATGTTAATGCCCAAGACAAAGGTGGTTTAATACCTCTTCACAATGCGGCATCCTATGGGCATGTGGACATTGCAGCGTTATTGATAAAATACAACACATGCGTAAATGCAACAGACAAGTGGGCATTTACCCCTCTTCACGAAGCAGCCCAAAAAGGCAGGACGCAGCTTTGTGCCCTGCTCCTAGCACACGGTGCGGATCCGACGATGAAGAACCAGGAAGGCCAGACCCCTTTAGATCTGGCAACAGCTGATGACATCAGAGCTTTGCTGATAGATGCCATGCCCCCAGAGGCCTTACCTACGTGTTTCAAACCTCAGGCTACTGTCGTGAGTGCCTCTCTGATCTCACCAGCATCCACCCCTTCCTGCCTGTCTGCTGCTAGCAGCATAGACAACCTCACTGGCCCCTTAGCCGAACTGGCAGTGGGAGGAGCGTCCAACACTGGGGACGGCGCGGCGGGCGCAGAAAGGAAGGAAGGAGAAGTTGCGGGTCTTGACATGAATATTAGCCAGTTCCTAAAAAGCCTTGGTCTTGAACATCTTCGGGACATCTTTGAAACAGAACAGATTACACTAGATGTGTTGGCTGATATGGGTCATGAAGAGTTAAAAGAAATAGGCATCAATGCATATGGACACCGCCATAAATTAATCAAGGGAGTAGAAAGACTCTTAGGTGGACAACAAGGCACCAATCCTTACTTGACTTTTCACTGTGTTAATCAGGGAACCATTTTGCTGGATCTTGCTCCAGAAGATAAAGAGTATCAGTCAGTAGAAGAGGAGATGCAAAGTACAATTCGAGAACACCGAGATGGTGGTAATGCGGGTGGCGTCTTCAACAGATACAACGTCATTCGAATTCAGAAAGTTGTGAACAAGAAGTTGAGAGAGCGGTTCTGCCACAGACAGAAGGAAGTGTCCGAGGAGAACCACAACCACCACAACGAGCGCATGTTGTTTCACGGTTCTCCTTTCATTAATGCCATTATTCATAAAGGGTTTGATGAGCGACATGCATATATAGGAGGAATGTTTGGTGCCGGGATTTATTTTGCTGAAAACTCTTCTAAAAGCAACCAGTATGTGTATGGAATCGGAGGAGGAACAGGCTGTCCCACGCACAAAGACCGGTCATGTTATATATGTCACAGGCAAATGCTTTTCTGTAGAGTGACCCTTGGCAAGTCCTTTCTGCAGTTCAGCACCATGAAAATGGCCCACGCCCCGCCAGGCCATCACTCTGTCATTGGGAGGCCAAGTGTGAATGGGCTGGCCTACGCCGAATACGTCATCTACAGAGGAGAGCAGGCATACCCAGAGTATCTGATCACATACCAGATCATGAAGCCGGAAGCTCCTTCACAGACCGCGACAGCCGCAGAACAGAAGACCTAGTGAACGCCCATTGGTAAAGGCCGGATCGGATTTCAGCCCAGGCCTGGATGACAGTGGATTGTTTTCAACAAAATCAATATTCTGTAAATCCCTGACAGCCTAGAAATAAGCTGTTTGTCTTTTATAAAGCATTGCGATAGTGATGAATATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAATATATCTCAGGCTCATTTTCATTGCAGTTATCCATCGCTAAGACAGGACTACTTCGATCTAGACTTAATGGGAAAAAAGACAACATAACCAATACTTTTCCCAAATGTTCACAATTCACACACTACATTTGCTTTTCTACATATGGCCCGTGTATATAATAAATATACACATATGACAGGCTCATTTTTTAGTTTTTTCTGAGCATTATCATCCACTTTTTGTTGCTATCATTGTTGTTGCTTACTTTGAAAATGAGCCCGAGCCTTCCTGAGGATATTTTGCACAGTCACACTGACTAAAATCACTAGTGACATAACCCGAGCTTCCGGCTGAGCAAGGCTTTTAGTGTCCACTTTTTTTCCCCCACTGATTTATTTTTTATCTGTACCTCTTATCAGCATAAACGGAGATGGAAAGGAAAAACGCCACATTTCAGTTTCCTTTTATGATTGGCCAGTCTTACAAGGGAAAAGCACCCAGCATCCACCTGATTTAGGAACTCCCGGGTTCAGAGCAAGTCGAAGCCCATGAGAGCCACTCGCACTTCCCAATGCAGGCCTGCCTCCAAGGCGTTCAGGATGGTGCTGGAGGGCCAGGAAGAGCCCAGCCGGTGAGAGGCTGTGGTGAGGCTGTGGTGACGTTCAGAGGGGAGACCGCCGGGGAGGCCTGTGAATCCAGAAGCATTGTTAAGACGCGTGAGGGGCCTGAGGTGCGAAAATACAGCAGCAGAAGAGGACCACGAGGACTTCTCCAAGATAACACTACTTCCCTTCACTTAACCCGCACCACCAGAACTGTCGCCCCAGAAGCAGCTGCCTTACTTCCCAATTCGGTGGAATTACCATACTCCAGTAGAAACACAAAAATACTACTTGATTGCTCCTCTAGTTTAGAAAGCTGGGGTTCAAATCCTGTTTAGTCACTGGGTAGGCACAAATGGGAGAACTCTTTTGTTTGCTCCAGATTTGGGGTTTATTTTGAGTGAGGTGCTTCAGATAGTTTACATAGGTCCCTGCACTAAATTTTTGAACCATTGTCTCAAACTGCTTAATAGATGAGGAGAACAAAAATGGAAACCAAAGCTCTTTCGGTTGTTTTTTAAATGAGAGAAATAGTCATACTGTTTCTTCTTGAAATCACTGTTTTGCTTTTTTTCCCTCAACATTTGTCAAGTGCACGTTGACACTTGTAAAAAAAAAAAAATTATCTGTGACGTTTCTCACACTGGTCCTTTTCATCTTAACTGAATATTGAATTGAGTGCATTAACATATTTACATGGACATGCTGTGTGTCTACTCAGCTTCGAAGCAAAGTAATATAAATGTGGCAGAAAAAAAGGAAAAACAGTGTGATGCAAACTTGCCATTTCAATTTACAGTCCTGAAAACTGATTTGCTTGTTTGTTTTTTTTAATGCAGGTTGATTAAGCTGTGACTTCATTTAATCTCCTAAAGAAAAATAAAATGGTTACATGCAAAGATTCTAGAATAGGGTCTTAAAAACACACATTTTGCTTTCCTTTTGGCTTGAGTCCAATGCTAGAACTAGGCATCAGGAACTAGTTTTGAGTTTTATAGCTGAATCTTGCATGGGTCCTCAAAATTAAATCAAGAATTAGCCTCAGTTGTTGCTTCTATTGAAGTTTTAGTGACCCAAGCTGGGTGTTTGTGTCTTGGCTACTTGTTTAATAGCACTAGAATTCCACACAGAGCTCCCAAGTTTGATATTCATGAAGAGGGCTGTTTTCCTCCCTTCCTTCTTTTTTGCTGTGTTTGTAACAGTGGGTTGAAGGAATTGGCATTTGTGTCGTTTTCAGTAGCTGTGAAAGTGTATACTACTTGCCTCCAATTAGATATAGTTTAAAATGGTAAACACAGCTGTGATTTTTAGTTAAGTAAAAAGGATGAATATGGTATGGATCTCAAAAGCTTTATAGCTTCATTAAAAACAGAAGCCACTACCCACTCAACTGTGGTTATATGTCGTTTCCGTCACACTAACTAGGTTAACGGATGTGCCAGTTTGAAACTTCAGCCTTATATTTGAGAAGCTAAGCCGTGGTTCGGTATTTAAACTGCCAATGTTATATCTGACATTCTGTGTGCCGAGTAAAGGTACTGTGTAAGGAAGACATTTGCTGTGCTTCTTGTCTTGTAATGATTTGAGTATGTAGTAGTTCTTGAAGGAATGTGTACATACTACTCATCTGCTGAAGAGAATGAGGTAATCAGTATCTCATAGGAGCCAAATACATTTTTTCAAAACTTGAAAACCAAAGGTTACCCTGAGCGCGTTTCAACTTAGCAGACATTGATTGCATTTGGAGTTTCCACCCATAGTAGTGGGTCTTAAAAGCATGGCATTCGGCTAGGCTGAGATGCAGTTAATTTCTTGTACACGCTCTACAGAAACACTAGCAAGTGAGGGCTTCCAGTACGCCCGCCCCTGAGTGGGCCCTCTGTTTCCCAAACCACAGAGAAGAGAGAATCCAGACCCTCCAGCCCACTGCACGTCTGACATCAAAGGGCTTCTAGCCCTGATGGCCCGGTTTGCTAGCTGTTGGCATCAGTTAAGTGGTCTGGACTGGGCACTTTTCTCCTTGTTCTTGGCCTCCTTCCCTTTTCCCCAGATTGCTAATCCGGATTTAGGATTAGCTCCAGCAGTTACCTTTGACCCCACTCATTTGCCTCCTTTCTCTGTCTTGAGTCTTGCATACATACAGCGACTGTACCTCAGTTTCCAGTTCACAACCAGAGTCAGGTAGTAGGCCTCATGTTCTCTGCCTAGAAGATTCGGCCACTTTGTTGACAGATGACAGCATGGAACCCACAGTTCTGATTCTGTGCAGAATAATAGCAGTACAACCAGAATCCTTCCTTCATCTTTTTCTTCTTGGAATTTGGAATTCCTGGCTTTTCAGTGACATAAGTAAACAACACTAGGACGTTTGTGTGAGATGACATCCTGCTCCTTTGAGCTTGATATTAGTGGCTACACTAATTTCTCTTTGCTCTCCAAATAGCGAAGTGCATTGATACGTGCAGAGAAATGCCTAAATGTGGCAAATAAAGTAATATAGAGTAATATCATAGCCTCTATTCAAAAAATAAAATTTTGGTGTACGCTAGAAAACAGCATTAGAATGCAATAAGTTGTCTATGTTTATCTCACAGCTGCACTTGGCCACTGCTCACCCTCGTTCTTAAACACCTGTACCTTCTGGATTTCCGTGAACACTTTCAAACAGAAATGGTGTGTATTTTTAAGCACCTTTCCCCTAGGATATCCAGATCCTATTTGTATGATAATCTATGATAAACAGCCTTTTTTCTGTATTTTTCTTTTGGGCAGTTATCTGACATAGAGCTATAGATTTTAATCATTCAGGCAGCGCTCAAAACTAACATTAAGATAGGGTTTCATGTGTCAGAAATTTAAAGACTAAACTTTGATGTCAAATCAGTGACAGAGAAATTAAAAGAAAGTAATTGTGAAGATGATATTTGTGCTTTGGCTGGATACGTCTAGCATATGAAAAGGAAATGCATTAAAAAAAAACTTAAAAAGTAAGACTACTTCAGATACCTTGTGCATTTTGAAATTAATAGACAATTAAAATTTCTTAAGAAAGCCTTAGCTATGGCAGAGAACTTTTCATCTTTTATATCCTAATAAACACAGAGTTGTAATTCCATTTCTCAGCATGTGAAAGATGTCAGCATGTTGGGTGTATCTCCATGTATCTCCCACCTGGTAAACTTAGTTGACAAGAATCTATTTTCTAAGGAATCCTCCTTTATCTGCAGAGGAGCTGAGAGAATCAAACCATCCCCCATTCCTCTGCAGCTGAACTTCCTCAGCTATCAAACATTCTGGTTGAGGGAAATGATTTCAAAACCCATGAAGTTTTGTGCATGTAGGGATTACCAGCAACTCATGAAGTGATAGATACCATGTAGAATTTGAGTGTTGCACAAGCTAATTTTGAATCATTTAAAAATATAAACCACAGTGATAAGTGACAAGCAGTAGGAAGCTAAGATTTTACATACTCCCCAAGACCAAATATGCTCACAAAGTGACCAGTTTTAAACATCTGCAGAGGTTGTTAACTCCTTTGAGAGAATATTCACACGGTAGAGGTGACTGCATTCTGACTCTTCATTTTTTCACATTTGCTTTTATGCTTTACACTTTCACATCTCCATACACACCCCACCACCCATCTTTTTCAAACAGATTTCTCATGCTCTAGGATCTAGAGTGTTTGGTTATTCTTCATAAGCCTGCCCTTTTCCGCAGGCAGCTCTTGAAGCCCCTTGATGTCTCTTTGTGTTTGCAGAGAAGTACAGTTAAACCCTGGTGGAGCGGGGGGAGGTCCCTTACATGCCTCCAGCCCCTCCCAAGGCTCAGGAGGAACAGCTAGAAAACACAATAAAAATTGGAAAGGAACCAAAATCTTTGAGGCTGATAGCCTAGACCTAGAAGCCGACCTTGACTATATAACCATTCTATTCATGACACAGAATATTTAAACTCTTCATGTGCATAGAATACCTGCTTCTGCTTCCATTGTTTCAAGCTCACCCTGTCTATTGTCTTTGATACCTACAGACTAAAAGGTACTTATATCAAGGTTTCTCAAAAACATTTACAAAACCAGCTTTGAGGAAATCAAGAGTATTTCCTGGCAACAGCATTTGAAGTAGTAAGTGTATCTTCTCATTGTGATGTTGGTCTGTGTACATAACCAACGTAGTGACTCTTCGGTTATCATTATTGGTAATGTTTTTATTTGTAGTCTCTGTGACCCACCAATGGCAGGGAGTTCAATTCACTCTCCTGTCCTGTTTTACGTTTGTCTATTTGTAGAATTGCCAGATAAAAGACACCCAGTTAAATTTGAATTTCAGATAAATAATTGTTTTGCTTAAGTATGGTTTGCATTATTTGGCATATATTTACTGTAAAAAATTATTATTTATCTGAAATTCAAACTTAACATCCTGGGCTTTTTGGCTTTGTTTTGTTTCGTTTTACTAAATCTGGCAACCCTGTTGATTTGGTTGTAGGAAATTGCTTACAGCATGTAAATTCTTCTAGACTTCACTCTCACATGGATTGGAGGACCTTTTCTTCCCCCTCACCCTCTTCTTTCCAAAAGAGAGCGTCAAGGAACTCAACCTGCCTGCATGGTGGGTTTCTATTTAAGACATCTTTATGATTATATTTAACCTGTAATTGTGCTTTGGCTAAATGTCTAACTTACAGTACTTGTAATTGTTTAATATTCAATAAAAACATTTTTAAAGTATACGGTATGT EMBV3_28809 CAAAAACCCTGACGAGTTTTGCCAGGAGGAGATGCTCCACAGCCAAGAGGAGGAGAGGCC Gene GeneID:510677|ADIG:NM_001113720:979_cdna Constitutive 0 NULL GeneID:510677 13 GENE ADIG NULL adipogenin EMBV3_07831 CACGTTTCTGCCTTTCTGATTCCTCTTGGAAAGCTAATGGTGAGGGTAAAGGGACAGAGG Gene BVT0102_144553 - 1 EMBV3_20595 GK000002.2:107556746-107564020 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16166 CCAGACCTGGGTTGCTGTATTCTCAGGATTGAATGGGACTCTGGAGGAGGGGTTTCTTGT Gene GeneID:768056|C23H6orf130:NM_001077113:386_cdna Constitutive 0 NULL GeneID:768056 23 GENE C23H6orf130 C6orf130 MGC140824 chromosome 6 open reading frame 130 ortholog EMBV3_24673 CGCAGCCCCTGCAAAGTAGCCTTTGTTACATGAAGTCCGCTGGGAAATAGATGTTCTGTC Gene GeneID:538474|NFIB:NM_001076104:6_cdna Constitutive 0 NULL GeneID:538474 8 GENE NFIB MGC140625 nuclear factor I/B EMBV3_14566 GATGGAGCAGTCTAAGAAGTCCTCGCTCATGGTGGCTCGCAGCATCCTAAACAACAAGCT Gene GeneID:539700|AKAP8L:XM_002688560:215_cdna Constitutive 1 NULL GeneID:539700 7 GENE AKAP8L NULL A kinase (PRKA) anchor protein 8-like EMBV3_06881 AAGAACCCTGACAACAAGGAGGAGGCCGAGAAGAAGTTCAAGCAGGTGTCCGAGGCCTAC Gene GeneID:518674|DNAJB8:XM_002697148:79_cdna Constitutive 0 NULL GeneID:518674 22 GENE DNAJB8 NULL DnaJ (Hsp40) homolog, subfamily B, member 8 EMBV3_41202 AGCCCACGGGCCCAGCTCCTAGGTATTGGTGAAATGCATCGTGACTACAGTAGCGGCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13903 TCCTCTGTCTCAGTCATATGCTGGGGTTTTACATTTAATGTGTGGTGCATGTGAGTGTGC Gene BVT0102_236755 + 1 EMBV3_28643 GK000010.2:50283149-50628366 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20783 AGAGCCAGCCCTCAGCACAGCCCTCACTATTTTGCTGCCTCATCGCCAACACCTTTCAAT Gene GeneID:100125264|NUP210:XM_002697140:100_cdna Constitutive 0 NULL GeneID:100125264 22 GENE NUP210 MGC157262 nucleoporin 210 EMBV3_39779 CTCGGAATTCTTTACCTGCTGAGCCAATCGGGACAAATACTCCAAAGGATATGCCTACCA Gene GeneID:617565|CLEC2D:XM_002687810:90_cdna UTR3_Alt 2 NULL GeneID:617565 5 GENE CLEC2D NULL C-type lectin domain family 2, member D EMBV3_05869 ATTCTCCTGTTGTTTCTGTGAGCTGCTAGGGGCATTAGCTTCAGAGTGGCCAGAGAAGAC Gene BVT0102_070969 + 0 NULL GK000002.2:130084460-130103589 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106857 TCONS_00104004 TCONS_00104005 TCONS_00104006 2 XLOC_062911 XLOC_062267 Coding TCONS_00104006 XLOC_062267 Coding Coding ZNF436 2:130079323-130091057 j TSS77111 7997 1 TCONS_00104006_3 358 0.188820807802926 4 0.31875905565499 0.00249783942056261 0.00317606461205748 0.00173556583681027 0.000511365752434566 0.000710303025309073 0.000986638475237309 0.000860123989735374 0.00121972361313072 0.00179127406553177 0.000588357489362835 0.000310077475934318 0.000119098627634244 0.000909973490333624 0.000876446609924596 0.000152300889411468 7.3202743313485e-05 0.000738128712218391 5.63462640245862e-09 0.00181987602154174 0.00260767571688484 7.10508624467478e-05 3.03360766817673e-05 0.000459420329757037 2.04204792879085e-08 0.000934906651657985 0.000152289234843057 0.000341360557036532 6.99895866066638e-05 5.97960723586901e-05 6.04880343486089e-09 XM_001789087.3 ZNF436 PREDICTED: Bos taurus zinc finger protein 436 (ZNF436), transcript 0.0 5290 98.03 0.386144804301613 NM_030634.2 ZNF436 Homo sapiens zinc finger protein 436 (ZNF436), transcript variant 0.0 2904 80.46 0.389646117293985 TCONS_00104006_3 sp|Q9C0F3|ZN436_HUMAN ZN436_HUMAN Zinc finger protein 436; 0.0 639 84.03 0.994413407821229 6 coding 1 1 1 1 0.115531000294235 0.520739052981856 -0.120777962567821 0.037488930726374 GAGCCTCCTCCCTGAGAGAACATCGGCTTGACCCCCGGGTCCGGGAGGGACCGAGCCAGGGGGTTGTCTTATTAAATTGTGGCAGCCTCCACCCCTTGGCGTCGGAGACACAGAGGGCGGGTCGCGCTCGAGGGTCAGGGAGGAGAGTGACCCGGCCCGGGTTCAGGGCCCTCCCCACCCGCCTGGGCGGCCAGAACTCCAGCCCTGGGGAGTGGGCAGGGCCTGTTTCTGTGCCTCACGCCCTGCTTTTCGCCTCCTATAGCGCTGTCTGCTAGCTGCTTTTCCTGCTCTCTCTCCTGGGAGGCGAATCCTTGAGCCCGAGATGGCAGCCACCCTGCTCATGGCTGGGTCCCAGGCACCTGTGACATTTGAAGATATGGCCATGTACCTCACCCGTGAAGAATGGAGACCTCTGGACCCTACACAAAGGGACATTTACAGGGATGTTATGCAGGAGAATTATGGAAATGTTGTCTCATTAGATTTTGAAATCAGGAGTGAAAACGAGGTGAATCCAAAGCAAGAGATTAGTGAAGATGTAGAATTTGAGACTGCATCTGAAAGACCTGTTGGAAATACTGAGGAAAATCCTGAAAGTGAAGAGGCCTTTGACAACAGGGATAGATCAGAAAGACAATGGGGAGATTTAACCGCAGAAGAGTGGGTAAGCTATCCTCTCCAACAAGTCACAGATCTGCTTGTCCACAAAGAAGTCCACACAAGCATCCGATATCATATATGTTCTCATTGTGGAAAGGCCTTTAGTCAGATCTCAGACCTTAATCGGCATCAGAAAACCCACACGGGTGACAGACCCTATAAGTGTTATGAATGTGGGAAGGGCTTCAGTCGAAGTTCCCACCTTATTCAACATCAAAGAACACACACTGGGGAGAGGCCCTATGACTGTAATGAATGTGGGAAAAGTTTTGGAAGAAGCTCTCACCTCATTCAGCATCAGACAATCCACACTGGAGAAAAGCCGTACCACTGTAATGAATGTGGGGAGAATTTCAGCCGCATCTCACACTTGGTTCAGCACCAGAGAACCCACACTGGGGAAAAGCCATATGAATGTAATGCCTGTGGGAAAAGCTTCAGCCGGAGCTCTCACCTAATCACACACCAGAAAATTCACACTGGAGAGAAGCCCTATGAGTGCAACGAGTGTTGGCGAAGCTTTGGTGAAAGGTCGGACCTGATTAAACATCAGAGAACCCACACAGGAGAGAAACCCTATGAGTGTGTGCAGTGTGGAAAAGGATTCACCCAGAGCTCCAACCTCATCACACATCAAAGAGTTCATACAGGAGAAAAGCCTTATGAATGCACAGAATGTGAGAAGAGTTTCAGCCGGAGCTCAGCTCTTATTAAACATAAGAGAGTGCACACTGACTAAGTCCTGTAATTACGACTGGGAAATGATTCATTTGAAGGTACAATTGTATTTGATATCAAAGAGCTCTCTCAAGACTGAAGCTTCTCTTACTGTACTGAATTTCTTTGCTGTGGGTCACCATTTAAAACATCACAGAAGACAAGCCACTTGAAATTCTGACCCATGGCTTTGGGAATATTATTCCCTTTTCCAAAATAGTGATTTGTATTCATCCAATACTAACGAATTATTTCATCAAAATCAGCCTCACAAATAACTGGAAATCTGAAGACCAGGTGATAAATGCTGGTAAATGCTCAGGCCTGGAAATGGAGTAAATCTTTCAAAGTAATTTCTCCCATCCTTGACCCAAAGAGCTATACTAGGAGAAATGTTGAACTGTGATAGGGTGGTCACAGCTGCTTTGGAACAAAACAACCAGAGACTTTACCTGAATTGCCACACCTATTCACTCACCATCATATCACACATCTTCCCTTCAAAGGGCTTTCTCCTTGAGTTGCTCATGCATTTGTATCTTTCTATCTTCCTGAGAGCAGGATTCTGCACGGTGAAGGCAATGATCATTGCTTTTCTCCTCATTGTTTCTAATTAACTTTTTTTAAAGCTTTCCTCTTTGTGAAAGCTAACTGAAGATTCAGATTGAAAGGAAAAATGAGACACAGATTTGGGGACCAAGGACTCATCAACAGTGGTGATTTTAGCAAGAGATGCCCACTGTTGTTATTGCCATTGATCAGAATTTATGTATTTTCTTTGGGGATCACTGTAGGGAATATTGTAGGGAAAATATCTTCAAGGAAAGCTAGGACCACAAGTGATGGTGGAGTGTAAGGAGCAAGTGGAATTGACTGGGGTAGGAAGCATAGAGTTCCTTCCCAAGGAATCAGGTCGTTTCTGTGTTCTTTCACCTCTACCCTATAAGATCAAGTCTCCCTATACTGCTAACTCTAGGATTTGATAAGGGCCACATCCCAGTGTTTATCTTAGCTTGCATAAGGGCATGTGTATGTACAGTGAAATGTGTATTCTTGATGTTTTTCCAATAGCAGAAACTGAATTCACACTGAATTAGCATGCTCTTGGGTGATATTGATCATGTGACAGAAAAACTGACATAACTCTAATGTGAGAAATGTCCTTTTGTTCATTCTTTATGAAAAAAATTTAAACACTAGTGCTCTTGTGTGCACTCTCCTGAAAGATCTGTACAGAACCAAGCACTTGTTTATACGTATTAGTCTGTTGGAGATAATTACCAAATAGGTTGATTGTCCTAGTCTCAGACTGAATGACTTTCTCTTTGCCCTAGTCACAAGGAATTAATAAACCTAGATAGGAATGTATTTCCATTCTCTCAGCTTACAAATTTAAGTGGTTTATGTCAGCGTTGACCCAATTTAAGCCCAGTAATGTCAGTTCTCCTTATCTGAGCTCAAATAGGAATTAAGAAATATCCCGAATGTTGATGCTTATCCAAGCATTTGGGGGTGGGGGTGGGAGGGAATTGATGTCCAGGAATGGGGGCTAGAGTAAGGAATATTTTTTTTTTGAGTCTGCCCCAAATACTGTGCTTTATTGTGAGTGTTGTAACATTTGAAAAACTTGTGCCATAACTCTTTGGGACTTGGTGTTAAAAGAGCCAGTGGTCTTTCTTGGGTAGTGTACTATAGTGATTTCCTGTGACCCACCGCCCTGTGGGTCTGCATCCTTTGCAATAACACAACCTCAGAAGTAACAGTGAAATACTCCACAAAGTAGATGTCTTTCTGTTGGCACTCCTATTTAAATACAGAATCGGGCAGGGAGCATGTTCTTTGTTCTATACGAAATCTAGCTGTGGGTATTCATATTTTAATTGTTGAATGACTTACATGTTCTTGATGACTAAACTCAAACATGTCTTTTTCCCATATCAGTGTTGCTGATGGTTTTAATGAATATCAAAATTCTCCTGTTGTTTCTGTGAGCTGCTAGGGGCATTAGCTTCAGAGTGGCCAGAGAAGACATCATCTCCATGACCTAACTGTATTTTACCCGCTTTTCTTTCCCTATTCTCCTGCCTTACCCCCAGCCTGTTCCTTCTGCTGCTCTTGGCTTCTAAGTGCCCCAGCCTTCTCTCCAGACATGTACACTCCAGTTGGGAAGTTAAAAGGGCAGAGGGCCAGACCAGCTCTATCCTCTCTTCCTGCCAGTTGTTGCCCATTTGCTGTGTTGAACTCTGTGTAAAGTTATGCATCAGTCTCTCTTTGCTAAAGCTTTCTGCATGCCTTCTGCTCCCAAGTCTCTGGCTGCTTCTGCACATACCCTGAACACATTGTGCCTGTTTTCTATGATTGTGGAGAGTGAGTGAACAAGTTAAGTATGTAGCACAGTTTTCCTTCTGGTATTGGTCACAGTTATATTAGTGTCTATCTACATCTGTATTCTAACAATATTCTGTAATTAAAAGTAAAATTTTTAAAATCAAAAAGTGAAGAATTATTTTAGTAATTCAGCACCAATTCACAAAACAGCTTTTCATCAGATTCATTAAAATTGGGCACAATTGGTTTTTTATATTGATGCCTCTGTACAGATGTTCTTGTGGGAATCTGGGAAGTGTCTTCACATATTGGTCAGCCTTTTGGATATTGCCATATTTGGGGGAGATGCAAAAACCTAGACATTTCCTGTGAAGATTAGGCTGATGACAAAGCAACATGGAAATATTTGGTATGGGTAACTCATTAACTTTGGGGAAGGAAAACAAAAGCAAAAAAAAAAAAAAGGAAAAAAATGAGGGGAGGCCATATTGCTTGAAGGAGATATTTTTGGGTATCTGTTAATACTAAAACAGTTTCTACTAAATTAGTATTAGGATCCCAGAACAGAGAGATGTCTTAAAAATAGTCACAGACTCTCAATTCATGACAAAATTTCACAGTCTGCCTAAGGCAGTGATTATTTTCTGGTATTTTGTGGCCACAATCTTCAAATTTCTTACAAGTAATTTTATCTTGGGAAGCCTTTTTTTTTTTTTTAATGGAAGACCAATTTAGACAGAGGTAGGGAGTAGAAGTGCTTTAAACTGGGGGAAAATACAAATATGAAAGAAAATTTTTAATTTACCCTATAGCCAAGACTGGAAAGAGATTTTATAAATTATCAGACTTTTTGGGGGTGGGGGGTGATGAGGGGCTGTGCCACATGGCTTGTGGGATCTTACTTCCCCAACCAGGGATGAAACCTGTGCCCTTGGCAGTGAAAGCTCAGAATCTAACCACTGGATCTCCATGGAGGCAGATGGCATAAACATTTCTTAAAACTTTTTTTCTCCTTCCTACATGTTCAGCATTTTTTATTTCTGGAAAGGAAAGTTCAAGGAAAATGGTGGAGAAATTGACCTGGCACTTCTCCTTCAGGGTATTTAATATATTAATATTTTACCATTATTCTAATAGAGGCAGATTTCCTTCCCTGAATTTTCTCTAGGTGGCTAGCCCTTGGTTAGGGCTGTGCTTCCAGGCCATTAGGACTCCACTGAGTCCATTGAAATGATAATTTGTTAAATGGTTTCATAGTGTTTCAAAGGTTAGTGTTCCTGCAAAAAAGGAGTTCCTGTGCCTCAGGAGAAACTTACTCTTTGAAGCATTGGTTAGATACCCATCTCTGTACAGCAGAGGAGCAGCCGACTGGGACCTCCTTATTTCTAGGTGACTTCAAGATAAAAAGGTTGTTAGTGAAAAACAACTGAGGGGTAAAACGGATTGAAGAAAATTACCCTGTAATGACCTAAAATGGTGTCATGGTGAATCTCATTGTATTTATCTGTTTTCCTAAATGGTTCATATGCAAAGTCTGTATCATTTTTACCTTCTTCAAAGGTGCTTTTGTTTTTCCCTTTGGGAGAGACCGAGGCTGATATCAAAATCTCACTTTGAATTTCATAGCATCCCCTGTGGGCTGCCTTGTAGACATCACTTGGAAATTACCCAGGCAGACCTGAAACTGAATCTACCACTTTGTTCTATCACCATCATCACCTTTCACCTGCTACTTCTGTACTTCCAAACTCAGTCATGGTCTAGTCATCCATGCTAGAAACTTATATTTCATATTTGAAAACTCCTCCTTAAGCCACCCTTCCAACAGCAATCATGAAAATCAGTTGCATAATTAGTCTTCCAGTCATTACCTTGCCACCTCTTAAATATTTCTCAAATCTATCTACCTGCTTTCTCTATTGCCCTCACTTATGAAACCTTGGGCAAGTTACTTAGCTTCTCTGTTCCTTGGATTTCCCATCTGTAAAGTGGTGGGTAATTATACCTACCTCATAGAATTGCAAAGATTAAATGAAATAATAGAGCTCAGAATATTAGTTGCAATTATTTAGACCATCCCCAAGCTACATCCTGCTTACTGAAACAACCTCTTAATTGGTCCTCTCTATTTTCAACTCCCTTCCAACTATTCTCCCTAGCTGCAGCTAGAATGATCTTTCTGAAGGGCAAACCCATTCTTGCCATTCTTCTGTGCAAAACTTTCTCATGCTTTCCATTGCCAGTGGCACAGTGTGTGATGTGTGAGGAAGTGAACAAGATCTGGCCTCTGCTGCCCTCCTGAGCTTCTATTCTCTGCACTTTCCCTGCACTTGCAGCACTCTCCAAGCTGCATCTCTTTCTCTCCACTCTTCTGGTCAACTTCTCATCCTTCAGGTCTCCATGCCTAGCTTGTTCCAGAGAACCTTTCCTGATCCCACAAGACTGAATCAGGTGTTCCTGTTCAGTGTTCCCTGGGTTTATTCCAGTCAAAGCACTTTATTCCTGTTTTGTAAATGACTGTTTACTTCTTTGTCTCCTCCACTAGATTTTTATATCCTCCAAGAAATCACTGTGTTTTGCTCACCATTGTATCTTCAGTCCCTAGCAAATGTTTGACTGAGAATAGGGAGGCAAAAAAACATGTCTTGGATAAATGAAAGGAGTTGATGTATCAATTTCATTCCCTTTAGCAGGACTGGTGACTTCACTTCTGATTTTTCACCACACAAGCCACTCATAAAAGAAAGTCTGTAGAAACGGGAGGTATTCTGTCATTGCATATCCGGGGGGGGCTCATGCAAGAGGAAAAAAGGTTCCCAGAGGCTATGTGATCCTCCCAAGGTAAAACGAGGATAAAATCACCTACTCTTGAAGCATCAGTATTTGATGAATCATTGTCATCTTTGGAGGGTTATCTAGGATTAGACATTATGGCAACTTTGGTAAAATGTTGCAAGGCAAGCTCTCAATACAGGGAGCTGGGGCAGGATTCTAAACTCCCAGCTGTACATTTGGCTATTGGTCAACCTCTGAATTCTCCAAGCTGATAATTCTCCAAGTTGAGCATTATAAACTAATAGTTGTTAATATTTTGAGGAGGATCCAGATTCCTTTAAGAATCTAATGAAAGTTTTGACTCTTTTGAGAGTTCTTTATATATTTTGGTTACTGGACTTCCCTGGTAGCTCAGGTGGTAAAGCGTTTGTCTACAATGTGGGAGACCTGGGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAGAAGAAAATGGCAATCCACTCCAGTACTATTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTAGGCTACAGTCTATGGAGTCGCAAAGAGTTGGACACGACTGAGCGACTTCACTTTCCTTTATCAAATACATGATTTGCAAATATTTCTCCCAGTCTTTGACTTTTTATTACCTTAACAACGTCTTTCAAAGAACCAAAGTTTCACATTTTGATGAAGCCCTGTGTTCTAATAGGATTTTTACCCAAGATTTCCTTTTCTAAGTCTCCGTATTGATAGTTCTCAAGTTACAAGACTCAACCTTTGTTTTTTAGACGAGGGAGGAAAGAAGCACACTTTCTAGATTTCACTTTCACTTGGTTATATCCACTCTATTGGAATGTGGGTTTTAGCCCAAGAGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCGAAGAGTTGGACACCACTGAGCGACTTCACTTTCACTTTTCACTTTCCTGCATTGGAGAAGGAAATGGCAACCCACTCCAATGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTTGCAGAGAGTCAGATACGACTGAAGTGACTTAGCAGCAGCAGCAATACTGCCACTATACCAGAGCAACAGGGCCATCTTTCTGAGCCCTGTATGTTAAAGGGCCCTCCTCCAGTTGTACCTTTCCCCGTGGGAGCAGAGGAACATGACATCTAGAGCTCATACTCCTGCCTCCCTTTCTAGATCACCAACTTCAGTTGTCTAGGACCTTGGACTCCTTTTCCCCGACAGCCCACTTCAGGCCTCTTCCCCAAGTGTGTTCTCTTGAAGGCAAACCAAGCTCCATGTGTGTACCCATAGCCCTTGGTTTGGGAAGATGGACAGAGACTGGACTTGCAGCCACACAGGTGACCATGAGGGCCCTCCTGGAAGAGGACAAAGCCAGAATAGGAAGAGCAGGGGGGCAAGC EMBV3_17501 CTGCTGACTGCCCGCAGCTTCGGCGACAAGAGTACTCGGGTGGAGTTTGACCTGCCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33724 CGCACGAGTAAAAGACACTGGGCGCAGCCTAAAGGTAAAAGGCCCACTGAAACTCGAACT Gene GeneID:100137903|LOC100137903:XM_002707807:123_cdna Constitutive 0 NULL GeneID:100137903 3 GENE LOC100137903 NULL similar to NBPF5 protein EMBV3_10928 CCATCTGCGATTGTGTGGGGTTTGGGATTTGCAGGGGGATCGACATGGAGAAGAAGCTTT Gene GeneID:523474|NOL9:XM_002694109:427_cdna Constitutive 0 NULL GeneID:523474 16 GENE NOL9 NULL nucleolar protein 9 EMBV3_17195 GTCATGATGCAGCTCTTCAACGAAATCAATGCCCGCAAGATCCACGGCGAGCGCAATGTT Gene GeneID:613800|ATP2B4:XM_002697120:49_cdna UTR3_Alt 2 NULL GeneID:613800 22 GENE ATP2B4 ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 EMBV3_30614 AGAGTTCCGCAAGATAGCCAACAGTGATAACATGTAGATGAGTGGAATATTGGCCGGCTG Variant GeneID:512622|JMJD2A:XM_002686436:424_cdna 539^653 1 EMBV3_19066 GeneID:512622 3 GENE JMJD2A NULL similar to JmjC domain-containing histone demethylation protein 3A (Jumonji domain-containing protein 2A) EMBV3_01867 GGCCCCCAAAAAGAAGAGAATCAAACTGAGCCACCCCAAGGACACGGACAGTCTCAAGTT Gene GeneID:540633|KDM5B:XM_002694202:713_cdna UTR3_Alt 2 NULL GeneID:540633 16 GENE KDM5B JARID1B lysine (K)-specific demethylase 5B EMBV3_06577 CTTCAAGAAGGAGGCGCTCAGAGCCATCCGCTACCTGGAAGACGCCTTCTGCGAGATGAA Gene GeneID:781808|LOC781808:XM_002695571:82_cdna Constitutive 0 NULL GeneID:781808 19 GENE LOC781808 NULL similar to hCG1645429 EMBV3_13996 TTCCATGCCAGCATCCCTCCCCTGCTCAGCGCATGGGTCAGCTTCAACACAGCAGGGCCG Gene GeneID:100337453|LOC100337453:XM_002693562:231_cdna Constitutive 0 NULL GeneID:100337453 15 GENE LOC100337453 NULL p53-induced protein-like EMBV3_23862 AGATCTGCTGCCTTGGGTGTCAGTCACAAAGCTCTGCAAACAGGAGTGACTAAACTGCAA Gene BVT0101_064240 + 0 NULL GK000008.2:24032952-24371504 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20040 TATTGTGAGGACCTTCTCATGGAAACCAACAGAAGACAAACTGGGGGGACAAATATCACC Gene BVV0102_260233 + 0 NULL GK000023.2:24977292-24982761 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134451 TCONS_00134452 TCONS_00134454 TCONS_00134450 TCONS_00134453 TCONS_00134455 TCONS_00134449 1 XLOC_081410 Coding TCONS_00134450 XLOC_081410 Coding Coding ICK 23:24980405-25004344 j TSS100221 5680 1 TCONS_00134450_4 523 0.0147887323943662 11 0.76317988136018 0.000293064240089347 0.000127990717667217 1.62238845401855e-13 1.35785352651979e-05 2.99883304540949e-19 2.70994733153683e-05 0.000100177698298328 0.000440326912045329 0.000134839961401303 8.98998087495395e-45 7.28515832136796e-35 6.16366839019115e-05 1.00403850100669e-05 1.22768403687644e-36 8.0445168029405e-05 0.0005491840200486 2.27870417173672e-38 0.000894177125569788 4.57558366153549e-05 1.0035167987597e-08 6.49546705156564e-05 3.67891441194029e-87 0.000247388185498117 0.000707809762919493 0.000307657866408051 0.000216935062147878 0.000490625335891394 5.29788845573083e-05 8.53165682546666e-05 1.93262024293522e-05 NM_001098887.1 ICK Bos taurus intestinal cell (MAK-like) kinase (ICK), mRNA. 0.0 5981 99.94 0.585035211267606 XM_005248952.1 ICK PREDICTED: Homo sapiens intestinal cell (MAK-like) kinase (ICK), 0.0 2960 81.62 0.525176056338028 TCONS_00134450_4 sp|Q9UPZ9|ICK_HUMAN ICK_HUMAN Serine/threonine-protein kinase ICK; 0.0 884 89.94 0.998087954110899 2 coding 0 0 0 0 0.191992120595644 0.440698077065193 -4.66299932067316e-05 0.999270626405958 AAAGAAAAAATAAGTTGTTTCCCGAGTCTGCTATAAGAAATATCATGTATCAGATACTGCAAGGACTTGCATTTATTCACAAACACGGCTTTTTCCATCGGGACTTAAAGCCAGAGAACCTCCTCTGTATGGGACCCGAACTTGTGAAAATTGCAGACTTTGGATTGGCCCGAGAAATCCGATCAAGACCTCCATACACAGACTATGTATCTACCAGATGGTACCGGGCTCCGGAGGTGCTCCTGCGGTCCACCAGCTACAGCTCGCCCATCGACATCTGGGCTGTGGGCTGCATCATGGCAGAGGTGTACACCCTCCGGCCGCTCTTCCCCGGGGCCAGTGAGATCGATACTATCTTCAAAATCTGCCAAGTACTGGGGACACCCAAAAAGACTGACTGGCCTGAAGGCTACCAACTGTCAAATGCGATGAACTTCCGCTGGCCCCAGTGTGTGCCCAATAACTTGAAGACCCTCATTCCAAATGCCAGCAGCGAAGCAGTTCAGCTCCTGAGAGACATGCTACAGTGGGATCCCAAGAAACGGCCAACAGCTAGTCAGGCTCTTCGATATCCTTACTTCCAGGTGGGGCACCCCCTGGGCAGCACTGCGCACAGCCTCCAGGAGTCAGGAAAATCTCAGAAGGACGTTCTGGAAAAGGCAGCCGCACCGCCTCACGTAAAGCCGGTCCCTCCTGCCCAGCCCCCAGCCAAGCCACACACACGCATTTCTTCCAGACAGCATCAAGCCGGCCAGCCCCCTCAGCATCTCATGTACCCCTATAAAGCTGAGGCTCCCAGGACGGACCACCTACCAGAGGACAAGCCCAGCCCTTTGCTCTTGCCATCACTCCACCCAAAGCATCCTCAGGCAAAAATTCTCACTGGCCTGGAGCACAAAAATGGTGAGATCAAGCCAAAGAGTAGGAGAAGATGGGGTCTCGTTTCCAGGTCAACGAAGGATTCCGATGACTGGGCTGACTTGGATGACTCGGACTTCAGTCCATCCTTCACCAGGATTGACCTGAAAAACAAAAGACAGAGCGATGAGACGCTGTGCAGATTCGAGAGCATTCTGGACCTGAAGCCCTCGGAGCCCGTGGGCACCGGAAATAGCGCCCCCACCCAGACGTCCTATCCCCGGCGCGACACGCCCACCCTGCGGTCGGCGGCCAAGCAACACTATCTGAAGCACTCTCGGTACCTGCCTGGAATAAATATAAGAAATGGTGTACTCCCGAATCCAGGCAAGGATTTTATTCCACCTAATCCGTGGTCCAGTTCTGGTTTGTCTGGAAAATCTTCAGGGACTGTATCAGTGATCAGCAAAATAACTTCAGTTGGTTCCAGCTCTACAAGTTCTAGTGGACTGGCTGGAAACTATATCCCTTCCTTTCTGAAAAAAGAAATCAGTTCTGCTCTGCAGAGGGTCCACTTGGCACCTATTCCCGACCCTTCCCCGGGCTATTCTTCCTTGAAGGCTGTGAGACCTCATCCTGGACGACCGTTTTTCCACACCCAGCCTAGAAGCACTCCTGGGTTGCTGCCCCGGCCTCCAGCCGCCCAGCCTGTACACGGCAGGACGGACTGGATCGCTAAGTACGCGTCTCGGCGATGACTGTCACGAAACCTTTTGTAGGGCACAGTAGGACCCTGTCCCTTGGCCAGCTGGTATTCCACCTGCAAGAGACTTTCGGTTGGTGGAAAAGCAAACACTTTATAGTTATTCTTCTGAACTGAGACATTTCAATATTCTTTTTTAAAGTTTTTTTTTTTAATATTGATTTGAATGCAGTACTTTTTTTTTGTACAAAGTTATTTTATTCTAAAACTGGGTCCCATTATTTTCTTAAACAGCAGCATTTTGTATATATGGATTATGTTTTAGCATTTTATACAGTCAACTTTGTAAGGAACTTTTTAAAGATTAATTGATTTTCCTTTGGGGTTCCAGATAATATTTTATACAGATTTTTAAAAATATAATAATATTGATGCAGTATTGCAACAGGGGTGCAATTTACAGCTACGCGATAAAGGGTTATTTCTTCAATGTGTGTGGATATTTGTGAAGTGGTTAAATTTTAAATGTGGCATGTTCGGTACTTTAAGCTTTTCTGGACTGATGTCAGCGCTAGAAAACTGACCATCTGCCGTTTCTCAATACCGTGTTATTGGTTTGACTTTTTAATACCGCTGTGCTGTTCTGAAAGTACTGTTACATAATTCACTTTGTTTTCTTTTTACTCCCCAGATGAAAAAACTCTAAGTAAATATTTTTAGAAATGTTTACAACGCGTTTTTTGGTGGCTGGTGATAATCCAGCTGAAACCAAGCTATGCCATCACATTCTATTTTCTTCCATTTTTGAAGTCACTTTCTATAAGTACCCATAAAAGGGAAGCTTTTGAAGCCAAAAGGTTCTCCACATAAAGGTTAACACAGTGACTTAAACTTATATCCCTGCCAAGATACATGACCCAAAAGCAAAGTTTCAAAGTAGCACAACCCTTAGAATGTTGCATTTAGCTCAGTCCTCCAGGCCTGGCCAGAGATAGACGATGAATAGTCATTGTCTGCCCTCTGGTCCGATTATCAGGGCAATTTGGGGAGCAAGAAAAAAATAGATGGCAGAGGTCCCACTGGTCTGTGAAGCCACAGTTACCATGATGTCAAGTGTCCGTCACGTGCCACATTTGAAGAACTCTAAACCCTTGTGTAGTTTCTTTCAACAGTGAGAACTCCATTGGGCAGAGGCTGTTCCATTGAGAGGAATGTTTACAGCAGTTTTGAAAATGACAAAGCTAGTTTGGAGACAGAAAAAGGAAGTCCACTCTGATCCACTCTGTCAGGCACACTCACCTCCACTCGTAATTACCTGAAAGACAAGAAAGAAGGTCACTGCCAGTGAACGCGACATCATCTCTAGAGTGTATAGACTCACTTTCTCCCAGGGCTCAAGTCACTTTTGTTTGGTTCTAGGATATAGCAAGTGGAGTCAATGAAATTGTCATTTTTGTAAGTTAAAATGATAGGTGAAAATGAATATTGGTACTTTGATATGGTTCAGCCTAATAAGTGGATACATTTCTGTGTTGATGTATTAATAATATGTTGCAGCCCATGGTTCCCAAAGGGCCCTCACCTAAAATCAGGGAGCAATTTGTGTCTTCGAGAATCTGACTCAAAAAGGTACTTAACCAAGCACCATGATTGCTGGGGGCATGAGAAAAGCAAATGATAGATGTGGATTTGAGAGGTCATATTTTCCTGTTAACAAACTGGCAGCAAAGCTTCAGGAAATAAATATGTATATGTAAGCACAACTTGAAGCTGAATTTATTTCTGTATTATATTCTCATTATCTCAATCAACAAAGAATGTGTTTTCAGAGATGAGTCCTTTACTATGCGGTTAATATTTATTTCCCCTTTCTGTATTAGGAATAAAAAGTAAGTTAATCTGAACGCTTACCCACCTTGCTAGAGAGCTGGTTTAAAATCGTAAATACCCTCTAGAGAACCAGATGGATTATGAATGCCATATTCCTGGTCCTCTAGCTTATATTAAGGTCATTACATTTTAATTGGAAAACCTACTTACCTGGTTACTATACATTATAAAATTGTTTTTCTATTACTTTTGTAGGGCCTCAATACAGAAAATATTTGTCTTTTCATCCTCTTCCTCTTTCCTTTGTTTATCAGCAGACAATTTCCCTTATTCATTTGAAAGTCAAGAAGCTGACACTGCATTGAGTAAAATAGAAGGCTGAAAAAAACAAGATCAGTTCTAAAGAACTAGCAAAATCCTCTAAAGTTCTCTTTTATTCTCACCCTGAAATGGGTAAAGGATGCACTGAGCATACAAGCTGATTACTGTAGAAAGGGAAAAGTCACCAATACTTTGTTAAGTAAAAAGAAAATACTGCCTGTTTCTTGTATTTTTAGTTACTATAAGATTATAAAATCTACAAGACACCAAGAGGAATGATAAGTTTAACTATACCTACCCACGACTGTACCTCATGTCAGGCATAAAGTTTTAGGGGACTTCAGGAGATGGTATAGTGCCCAAGGGTTCAGTGACAGTGGTTATGCCAAAGGGTATGCGTGTGAACTGCAGGGAAAGTCGCATGAGCCTAAAAGCTATTCTTCGTGTGATTGTTCATTTCACAGTAAGCTGCCATTAATTACTAAGCCCTCAGCCAGCTCATATATGATTTAAATAGGAAGAAAACCGATTTTCTCAAGCAGTTTCTTACAGATCTCTTGCTTCAAGGACCATAAACGTCTAGTAAACGGATGCTGTGTCATATTCTGGAATGATAAAAAATTAAACACTTGACTCCAGACAAGCCATGTAAAACAGAATTGTTTTTAAGTACAAATCACCAGTACTGTTGGAGTTCACAGGCACCATGTTTTCTTACGAAGTGGCATCAAGCCATTGTTTTGTGCCATTTAGGAGAGAAAAAGAATACAGGCTGTATGTTTTAGCTCAGTGTGTGATCCAAAGCAATATGTTTATAAGAAAATGTTTGATGTACTAATTATTTTCTATCATTTAAAGCATACTGTAGCAACTTGTTTAAGATATGTGGTTAATTTTTAGAATTATTTTTACAATTTCCAACCAAAGTACTGTATTTTATATAATTTATTGTGAGGACCTTCTCATGGAAACCAACAGAAGACAAACTGGGGGGGCAAATATCACCTTAATCTGTATTATCAGTTTCTTACAGACACTGCTAATGTGAATTTAAAATGGCCTGAATAGTCTTCTGATCTTGGATAGTTCAGTACTGACAGCAATTTCGTCACCTGATTTGATTACAAGGGAGCAACTAAGAATATATTTAATTATAAAGCAAATATTCATAATGATGAGAAGATAGGAGGACTGAAAACTATTTACTCAAGCCCCTTCTGAAATAAAATGTTCCTTTTTGAATAGTTTGTCCTAAGGTGTTTAAAAATGTTAACTTTACTTAAGGAAAATTCTGCTCCAAATAAAGTTACAGTTTAAGAAAAATTGATTTGAGTGTTCTGTTTTTGTTGTTATGTTCTTCCATCAAACAATAACATTACTATTTCCTAATTTGAAATTTTCATATTTTATAATTTCTTAACACCTATTAGAGTGTTTACTGCTGTGAAATTGATAGCATATACTTAGACCAGCAGTAGGAAGCGGTATTTTGCAATGTGGAGACTATTTAAATTTAGCTTTTAGCAAATTAGGTGACTAGGAATATTTTGACAAAACAAAAAGCACATCAAAACAATTTCTTGTTGCTGATTTCATCATGACAAATACCTACCTTGTATTTTTCTAGCTTTCACAGTATAGTCACATGTACAATATAAACATGTACAGTATAAACCTTCAAAAGAAGCTCATACCTTCATGAATTCCATACAGGATTCCACAGAAAATTCATTTACCAAACATTCTTTGAGTCCTTGAAAGAATTTTGAGGGACAATGATTTACCAATCAACCTTGTATTGGTGAATCCATAAATGTGCCCTAGCCTATCAGAACACCCCCAACCTGAGTGTGTCATCACCCCATGAATCCACAGATGTGCCCTAGCCCACGAGAACACCCCCAACCTGAGTGTGTCATCACCCCGTTCGTCTAATGACCCCCCATCTCCCCTCAGCCCTTCAGATGC EMBV3_24522 AGGCCCAGGATGGCAGTCCACTGACAAGCAGGCGGTCCTCGGAACCTCAAGCCCACGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42879 TGGGGTAGACTGCTGGATCGACAACACCAGGTTATATGCACACACTGGTACAGAACCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14193 TAGTTGATTTTAAACAAAATTTTGTCCAGATTTTGCTACCTTCAAGAAATCTGGTTTGGC Gene BVV0101_049739 - 1 EMBV3_21082 GK000006.2:29354862-29447013 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36957 AGGCCACATACAACACACAGGTCAACTTCATGGCCTCGCAGATGCTCAAGGTGTCGGGCA Gene GeneID:528991|XAB2:NM_001075919:72_cdna Constitutive 0 NULL GeneID:528991 7 GENE XAB2 NULL XPA binding protein 2 EMBV3_06276 AAGTGTCCCAAGACTTAGTGTCCTTGCAGCGAAGCCAGAACCCAGACTCACCTCTGCCCA Gene GeneID:540504|SYNE2:XM_002691063:493_cdna UTR3_Alt 2 NULL GeneID:540504 10 GENE SYNE2 NULL spectrin repeat containing, nuclear envelope 2 EMBV3_22702 TTCCTGGAGAAGAAGGGACCCCGAGATCGGCATGTGGAAAAGCTAGATCTAGGAGGCTTT Variant GeneID:505456|STAP2:NM_001034246:182_cdna 204^275 3 EMBV3_03300 GeneID:505456 7 GENE STAP2 MGC127502 signal transducing adaptor family member 2 EMBV3_04411 TCTACTGGAAGGAGTTTGTGAATGAAGTGGATGTGCTGGTGTTCATGGTGGACTCGGCTG Gene GeneID:614282|ARL10:NM_001076320:17_cdna Constitutive 0 NULL GeneID:614282 7 GENE ARL10 MGC140327 ADP-ribosylation factor-like 10 EMBV3_36809 TGGAGAGGCGAAGGATGAACGAGATATGGCAAGGCGGGGAAAGGACAGCTTTTGGAGAAT Gene BVV0102_111948 + 0 NULL GK000003.2:48882624-49110155 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169748 TCONS_00169746 TCONS_00169747 TCONS_00169749 1 XLOC_103439 NonCoding TCONS_00169749 XLOC_103439 NonCoding NonCoding - 3:48882839-48897104 - TSS127011 623 1 TCONS_00169749_3 77 4 0.95660403813797 0.000122445196479538 0 0.000165335081369181 1.66059886684542e-97 0.000178135324201974 1.41859071493983e-39 0 1.8987842687397e-05 0 0 0 0 0 0 3.66110434258781e-96 0 0 0 0 8.79015366666992e-299 5.59032833103835e-06 0 0 3.17467284076769e-32 5.10554048163758e-80 0 0.000281311226872254 0 0 0 0 noncoding 1 0 1 1 -0.0966473450849626 0.401953728893901 0.0248626125253434 0.670472282126436 GCTCTTCGCCGCTCGCCTAAACCACCGCGCGGTGCGACTCCCGACTTGCCCGTGTAGCCCGCTGAAGTGTGAGGGCCCCGCTGGCCCCGCCACGACCCTGCGCGCGCCCCCGCTGGGGCCTGATTAGCTTGCGGCTACGCAGAGAGCAAGAAAAGTCTCAGGAAACCATTGCAGAGGGCGGGCCACGGTGGAATGCCGAATTACATCTACATAGCTAACAGGACTTGGTCAACTCCAGGTGTGCAGACACCAAGCAGGAAGATTTGCCCCTTCAAGGTCATGCTCACTTGGGGTTGGTGATGAGATATGAGACAAATGATAAGGGTTCTTCACCCAGTTGACGTTACCTGAAGCCTTCCTGAAAAAGGCTGCCTGCGTGGAGAGGCGAAGGATGAACGAGATATGGCAAGGCGGGGAAAGGACAGCTTTTGGAGAATGCTCCCCTGCCTGCTCTGCTCTGAGGACTGGAAGGAAGAGAGGCTGGTTTTATCCTTGTATCTCTGAAGAGCTGGGAGCAAGAGTGACAAGTTTGCGGCCGGGCTTGGTGGAGACAGCAAGAATCAAGAGAACATGGAGTGAAACTGAAGTGGGGTGGAAGAAGGAGACCAGATGTGACAGCGATC TCONS_00173238 TCONS_00173241 r 5' 28 TCONS_00173238 TCONS_00173241 r 5' 28 EMBV3_43400 TGTCCCTCATCGTCTTGGTTCTGGGGGGCATATGGATGCACAGACGGTATAAACGCAGAA Gene GeneID:515700|IL1R2:NM_001046210:2_cdna Constitutive 0 NULL GeneID:515700 11 GENE IL1R2 IL-1R2 MGC137383 interleukin 1 receptor, type II EMBV3_02251 GAAGGCACATCCTTGGCAGAAATATGATCAATTGCATGCTTATGGAAAACAAACCACTGA Gene BVV0102_281774 - 1 EMBV3_06240 GK000030.2:79356208-79402955 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42644 CCAAGGTGGCCCTAGGAAGTAGGGAGGTGGAATCGGAAACTAAATGTCCAGAGTAGATGA Gene GeneID:768241|PDRG1:NM_001078115:1384_cdna UTR3_Alt 1 NULL GeneID:768241 13 GENE PDRG1 MGC139440 p53 and DNA-damage regulated 1 EMBV3_21415 ATCTAGGGAGACCTGTGCATAGTGTAGATCGGAGTGCACCAGCCTCCTGGCCTCCAAGGC Gene GeneID:539361|SREBF1:NM_001113302:90_cdna Constitutive 0 NULL GeneID:539361 19 GENE SREBF1 SREBP-1 SREBP1 sterol regulatory element binding transcription factor 1 EMBV3_19076 AACAAGTCAACTGAATTGCTGCCTGTGGAGGCGAGGAGTTGTTTTTGGTCTCTGGAGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40677 GAAGGAATATGCAATGGCGTTCCCATGGTGATGATGCCCTTGTTTGGTGATCAGATGGAC Gene GeneID:286792|UGT1A6:NM_174762:14_cdna Constitutive 0 NULL GeneID:286792 3 GENE UGT1A6 MGC179466 UDP glucuronosyltransferase 1 family, polypeptide A6 EMBV3_35764 GCCTCATGAGTGAAGGAGCTGGTATGGACACCGCGGAAAATGCTAACTTTATAAATCGTT Gene GeneID:100300664|LOC100300664:XM_002689230:90_cdna Constitutive 0 NULL GeneID:100300664 7 GENE LOC100300664 NULL similar to protocadherin beta 5 EMBV3_06245 TTCCAGAACCAAGTGAAGACTCAGACCCCACAGCAACAGCGCCCCTCCTGCCTCCTGGCT Gene GeneID:100294983|LOC100294983:XM_002692231:1478_cdna Constitutive 0 NULL GeneID:100294983 13 GENE LOC100294983 NULL hypothetical protein LOC100294983 EMBV3_04176 CTGTGCCAAGGGGTGTTGTGCACTTGAGACGTCCCTCACCCAGGGAGTTTTTATAGTAGA Gene GeneID:537395|DDX23:NM_001102202:95_cdna Constitutive 0 NULL GeneID:537395 5 GENE DDX23 MGC152630 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 EMBV3_03568 CGGTCAAAGTGCCCCTGGTTCCGCAGTTTTAAGAGTTTGTCACTTTTCAGATGGATGGCC Gene GeneID:521239|MKX:XM_002692129:90_cdna Constitutive 0 NULL GeneID:521239 13 GENE MKX NULL mohawk homeobox EMBV3_23162 ACGCGTTGTCATTTGGGAGGGCCCGGGTGTTGTTACAGCTTCTTCACTGTAGTTTTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43224 GTAGGGTTTTAACCCTTTCGTTACTTGAATAATTCTGCGGGCCTTTTAAGTTTCATGGCC Gene BVT0102_040826 + 0 NULL GK000019.2:21433104-21443360 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095687 TCONS_00095688 TCONS_00095686 TCONS_00095689 1 XLOC_057771 Coding TCONS_00095688 XLOC_057771 Coding Coding SSH2 19:21442217-21541977 j TSS71264 5787 1 TCONS_00095688_8 1409 14 0.942130534588358 0.00691228282720657 0.00499218346819851 0.00478124901319739 0.00466594402344358 0.00146183065943184 0.00190334895754238 0.00228745810808131 0.00228936207775253 0.00436541331601491 0.000627722206738008 6.69609776609874e-05 0.000153636774899692 0.001125207119009 0.00345140580450789 0.000350071001422163 0.00168789008390807 1.9456535206783e-06 1.48397403140216e-09 1.01006352373752e-06 0.00181649410391491 0.00152357133837379 2.85869262605931e-05 8.55793173388233e-05 7.94365781887499e-09 0.00376371216993517 0.00267104207030365 0.00215838451234172 9.28958477775226e-08 0.00011888517587423 2.58879564110757e-08 XM_005220147.1 SSH2 PREDICTED: Bos taurus slingshot protein phosphatase 2 (SSH2), 0.0 1.044e+04 100.00 0.999827198894073 XM_005258059.1 SSH2 PREDICTED: Homo sapiens slingshot protein phosphatase 2 (SSH2), 0.0 5975 82.44 0.998963193364438 TCONS_00095688_8 sp|Q76I76|SSH2_HUMAN SSH2_HUMAN Protein phosphatase Slingshot homolog 2; 0.0 2330 83.45 0.968772178850248 2 coding 1 1 0 0 -0.386877452222602 0.0296807215702304 0.0109418136960484 0.834753124017718 CCGCGGCCGAGCCCCACGGCTGCGGCGCCTGCCTCCGCGAGACCCGGCGGGCCCAGCTCGGCCGCCGGGAGCCCGCACTGCCTGCGCTTCCAGTCCCGTGGAGCCCAACGCGAGCGCCTCGTGCCCCAGCCGGGCGGGGGCCAAGATGGGGAGCCGTGCGCCCTGAGCCGGCCCCATGACCCTGAGCACGTTGGCCCGCGAGAAGAAGGCGCCCCTCGCCTGCACCTGCAGCCTCGGTGGCCCCGACATGATCCCCTACTTCTCCGCCAACGCGGTCATCTCGCAGAACGCCATCAACCAGCTCATCAGCGAGAGCTTTCTAACTGTCAAAGGTGCTGCCCTTTTTCTACCCCGGGGAAATGGCTCATCCACACCAAGAGTCAGCCACAGACGCAACAAGCATGCAGGTGATCTCCAACAGCATCTCCAAGCAATGTTCATACTACTTCGCCCAGAAGACAACATCAGGCTGGCTGTAAGACTAGAAAGTACTTACCAGAATCGAACACGCTATATGGTAGTGGTTTCAACTAATGGTAGACAAGACACTGAAGAAAGCATCGTCCTAGGAATGGATTTCTCCTCTAATGACAGTAGCACTTGTACCATGGGCTTAGTCCTGCCTCTCTGGAGTGACACCCTAATCCATTTGGATGGTGATGGTGGGTTCAGCGTCTCGACAGATAACAGAGTTCACATATTCAAACCTGTATCTGTGCAGGCAATGTGGTCTGCACTGCAGAGTTTACACAAGGCTTGTGAAGTGGCCAGAATGCATAACTACTACCCCGGCAGCCTGTTTCTCACCTGGGTGAGTTACTATGAGAGCCATATCAACTCAGACCAGTCCTCGGTCAACGAATGGAATGCTATGCAGGATGTACAGTCCCACCGACCTGACTCTCCTGCTCTCTTCACAGACATACCAACTGAACGTGAGCGGACAGAGAGGCTAATTAAAACCAGATTAAGGGAGATTATGATGCAAAAGGATTTGGAGAATATCACATCGAAAGAGATACGAACTGAACTAGAAATGCAGATGGTGTGCAACTTGCGAGAATTCAAGGAATTTATAGATAATGAAATGATAGTGATCCTTGGTCAGATGGATAGCCCTACACAGATATTCGAGCACGTGTTCTTGGGCTCAGAATGGAATGCCTCCAACTTAGAGGATTTACAGAACCGAGGGGTTCGCTATATCTTGAATGTCACTCGAGAGATAGACAACTTCTTCCCGGGAGTCTTTGAGTATCACAACATTCGGGTGTATGATGAAGAGGCAACCGACCTCCTGGCTTACTGGAATGACACTTACAAATTCATCTCTAAAGCAAAGAAACATGGATCTAAATGCCTCGTGCACTGCAAAATGGGGGTGAGTCGCTCGGCCTCCACTGTGATCGCCTATGCGATGAAGGAGTATGGCTGGAACTTGGACCGAGCCTATGACTATGTGAAGGAAAGACGGACAGTGACCAAGCCCAACCCCAGCTTCATGAGACAGCTGGAAGAGTACCAGGGGATCTTGCTGGCAAGCAAACAGCGGCACAACAAACTCTGGAGATCGCATTCAGATAGCGACCTCTCGGACCACCACGAACCCATCTGCAAACCAGGACTGGAACTCAACAAAAAGGAGATTACCACCTCAGCAGACCAGATTGCCGAGGTGAAGACCATGGAGAGCCACCCACCCATCCCTCCCGTCTTTGTGGAACATGTGGTCCCGCAGGATGAGAATCAGAAAGCCCTGTGCACCAAAGAAAGAATGATCTGCTTGGAGTTTACATCTCAGGAATTTCACGCCGGACAGATTGAGGATGAATTAAACCTAAATGACATCAATGGATGCTCATCAGGGTGTTGTCTCAATGAACCGAAATTCCCTCTTGACAACTGCCATGCATCCAAAGCCTTAATCCAACCTGGAAAGGACCCAGAAATGGCCCACAAGTTCCCAGACTTAACTGTGGAAGATCTGGAGACGGACGCGCTGAAAGCAGACATGAATGTCCACCTGCTGCCCATGGAAGAGCTGACATCCCGCCTGAAAGATCTCCCCATGTCCCCGGATCCTGAGTCACCAAGCCCCCAACCCAGCTGCCAGGCCACAGTCTCAGATTTCAGTGGAGATCGCATTGACTTTTTCAGCGCTCTGGAGAAGTTTGTAGAGCTTTCCCAAGAAACCCGGTCCCGATCTTTTTCTCATTCAAGGATGGAGGAAGTGGGTGGAGGAAGGAATGAGAGCTGTCGACTGTCAGTGGTGGAAGCAGCCCCTTCTGAAGCGACCACTGATGACCAGAGAAGCAGCTCTTTGAGTAATACTCCCCACGCATCTGAGGAATCTTCAGTAGATGAGGAGCAGTCAAAGGCAATCTCAGAACAGGTCAGCCCGGACATCTTCATGCAGCCGCACTCAGAAAATGCGATGTCAGTCAAAGAAATCGTCACTGAGATTGAATCCATCAGTCAAGGAGTTGGACAGATTCAAGTGAAAGGAGACGTGCTGTCCAACCCATGCCACACACCAAAGAAGCACATCGTCCACGAGCTGCCCCTGGAGAGGGCCCAGGCCGCCGAGAACAGACCTGGAAACCTGGAGCAGAGTGAAGGTTCCTGCCCAGCCCAGCCTGAACCAGCCAAAGACTCAGGGAAGGGGGACCCCGAGGGGTGCCCAGGGGCACACTCCTCCACCGCAGAGGTAGAAGAAGAGGAACCAGTGGAGGGGGAACAAGAGCTCTGGGGCCCCGGGATGCCCCCGGGTGCCAAGTGGTACCCCGGGTCCGTGAGGCGAGCCACCTTGGAGTTTGAGGAGCGCCTGCGGCAAGAACAGGAGCACCATGGTGCTGCCCCTGCGGGGACCTCGCTGTCCACTCGCAAGAATTCCAAGAACGATTCTTCAGTGGCAGACCTGGCAGCGAAAGGGAAGAGTGACGAAGCCGCCCCAGAACTGTCATATGTCCCCAAGGAGCCAGAGACGGGCAGGGGCCAAGGGCGATGCGGTGGGTCTGAGTCTGGCTCTTTACTGCGTCCTGAGCAGCTTGCCATCGTCCCGGCCCCTGAGCTGCGGGAGTCTCACCCAGCGCCAGCAACTCAGGATGGCCCACGGCATGAAGGTATCCTGCGGGAGCCGAGGACTGTGGTCTCCGGCCAGGGGCCCGAGACACCAGCGGCCCCTGCTGCCTTTCCCAAGAAGATAGAAATCATTGAATACACCTACACAGCCACATCCCCTGATCCCGGGCCAGGGTGGGAAAGAGCCAGCAGTGAGAAGAGTGGGGCGCAGGGACTGAGGACAGTGAAGGTGGAAGAGACCCTCACTGTCCTCTGTGCTCTGGATGAAAATCTGAACCGGACGCTGAGCCCCGACCAGGCTCCTCTGCACCCCAGAGTGCTACCTCCGCCTCATTCTTCCTCTCCCCAGCATGAGCACAGCAGGCCAGTCGACCTGCCCCCCACCCTGAGCAGCCCAGCAGCGCCTATTGTCAGTCCCACGACCCAGCCATGTGGCGCCAGCCCGGATCACCTGCACCCCCAGACGGTGGTTCACCTGGAAGGCTTCACAGGGCAGAGCAGCACCACAGACAGCGAGCCCTCCACGGAGCAGGGCAGCTGGGAAGAAAGTCAGGAGGGCCCCCTCTCCAGGGCCAGTGAAGTGCCATATCAGGGCTCCCAGTTCAGTAGCGAAGACCTGCATTTAATCAGCCAACTGGGTAATAATATCGGGGAGCAACCAGAAAAACTGGACCCAACATCTGTAGCCCATCAGCTCCCACACAGCTCCAGTAGCGACAGTATAGAGAGTCCCAGTCAGAGCCCCAGGGTGGTGAAGGGACGCGCTAAAGAAATCGAGTCCCGAGCAACTTCCCAGGTAGGGCTCCCCAAGCCACCCCAAATGAGGCGTTCAGCTTCCCTTGCCAAGTTAGGTTACTTGGACCTCTGTAAAGACTGTTCACCAGAGAGGGAGCCTGTCTCCTCTGAGTCCCCTCATCTCAAACTGCTTCAGCCCTTCCTCAGAACGGACTCGGGCATGGAGGCCCAGGAGCCCCCAGAAAACCCAGACACTCCCCAGAACCGAGAGCCCACCAAGTATTTGATAGAGCAGCTCAGAACCACAGAGTGCATCGCGCAGAGCAGGCCAGTGGAGAGGCCCCTTGCACAGTATGCCAAAGAGTTCGGTTCCAGTCAGCAGTGTTTGCTCCCCAGGGCAGGACCTGGATTGACTAGTTCGGAAGGAGGCCTTCCTTCGGTACCGACCCAGGGACTGCAGGACACCAGCCCGGCCCCGGGGCTGGCTGTGGCGCCCCGAGAGCAGCACGGCAGAACTCACCCCCTTAGGAGACTGAGAAAAGCAAATGATAAAAAACGGACAACCAACCCCTTCTATAATACCATGTGATTCTGAGCCTGTACACGTGACTTTCTAAAAGAAATGTTTGTAAAAGGGGCAGGTGTAATACGTAAGGAACCATGCACTTTATTGGTTAATTTTATAATATTTTGGTCATTTTACTGTTCCTGGCGCATGCAGGGTTTGTTCCCCACCCCCACCCCGAGTGTGTGTGAGAGAGAGTTTGATTTGGACGGCAAGACCATTTTGTCTTTTTTTTTTTTTTGGGAAAATTCAAACCTCAAAAAAACACTCATTTTCAAAGAACACCTTTATCCAAGGCAACGTGCTGTTTTTCAATCAACTGCCACCTGCTCCTCATTTTGCCCTCCGAGGAAAGGCCTGCTGGCTTGATTGAGGAAGGAAGCAGATGGGGAGGGTGGGATGAAGCTGGAAATTGGAAGCGCTGCCCTGGGCCTGTGTGATGAGGGTTTGGTCTCCAGACCTGATGCATTGGATTCAGATTTGCTGAAGGGGGCAGCCTGACGTCAGCGTGTTCTCAGTGCAGCCCATTGGGAGTTCCTGAGGTGGGCAGGCTCTGCTTTGCTTTCAAAGAGGGTCTTCCAGAATTCATCTCTTCTGGTCTGCAGAGTGTATCATTATAAAAAGGCATGATAACGGCTGGCTTTGTAAACCTATCAAGCAAATACTTTTATTTTTTTTTTTACCCCAAGCAAATCATTTTATTAAATTTAAAATGACCTCCAAATGAAATCCAAGAGGTCCTCTGTAAAGGGAATCTGAATAAGAAGAGGTGAAATTGGGAGTGGAGAGGTGGTCACGCCCAGTGTCTTCTGGGTGGATGGACTCCACTAAGGTGGTCATCCTACCCTTTCTTCCCCACCCCCTCTTCCCCCCTACCCGCCGGAAATGTGCTCTGCAGCATCCTCCCAATGAGAAAACACGATAGGGCCAAGTTTGAAAAACAGCAACTGAAAATGTGTGTGTGTTCTAAAATGAGTACAGATGTAGGGTTTTAACCCTTTCGTTACTTGAATAATTCTGCGGGCCTTTTAAGTTTCATGGCCATATTTTTCCAATTTATTTTCCTCCCTCATGCTGTTTTTCCCAACGCTGCCTAACTTTTTAATTTCATAGATATTTGAATTGTTACATGACCTATGTATAACCTCCAGTGAATGCAAAGTTTTTCTGTTTAATATTATCACTGTTAACACTTGACATAAGTTTTCTTTTTTTCTTTTCCTGGAAGATTTGTCATTTCTCTAGTTTATATACAGTATTTATGTACATAATGTCCTCACTTTGTTACATTGTTTTGTTAATGTTGTAGGGTCTTTTTGATTTATCCATTTTAAGAAGGAGTAAAGCTGCAACTGGAAGACATACAGATACCACAGAAATAAAACTCATGGGTGTTGGTAGGAATC EMBV3_31642 GGCGGATTCTCCCCCAGGAAACTGCGAGATAAGCAAAAAGGACTGATCTGTAAGCGAACA Gene GeneID:512796|NFASC:XM_002693905:251_cdna Constitutive 0 NULL GeneID:512796 16 GENE NFASC NULL neurofascin homolog (chicken) EMBV3_38151 CAGTAGTTGGATGCTTGGCACGTCGTCCTGTAATAGGAAACCTTTGCCTCATCAGTTTTC Gene GeneID:527349|RGS3:NM_001077973:38_cdna Constitutive 0 NULL GeneID:527349 8 GENE RGS3 NULL regulator of G-protein signaling 3 EMBV3_39345 CCCAACAAATCTCATTTATAGAATGTAATGCAGTTCTGAGTGGCTTGAAATGTACAGAAT Gene GeneID:539494|SLC25A12:NM_001101194:31_cdna Constitutive 1 NULL GeneID:539494 2 GENE SLC25A12 NULL solute carrier family 25 (mitochondrial carrier, Aralar), member 12 EMBV3_14729 GGAGATGACAGCAGAGGAGAGATCCCAGTTCGAAATCCTCAAGGCACAGATGTTTGCGGA Gene GeneID:514567|DDX27:NM_001080271:1066_cdna Constitutive 0 NULL GeneID:514567 13 GENE DDX27 MGC139525 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 EMBV3_31512 GAGAACTCCTCTAGATGTAAAATCACCTCAGTACCCAGACCACCTCCTTGACGTGCCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21733 GTCTCAGATAACCATTGCTGTTTTTACTGCCCGTCTAAGCTCCTTGTCTTCAACTGGGTC Gene GeneID:530205|LOC530205:NM_001083456:159_cdna UTR3_Alt 2 NULL GeneID:530205 3 GENE LOC530205 MGC137767 hypothetical protein LOC530205 EMBV3_26303 TGGCTGGGTGATGCAATCCCTGTCTGCCTCTGTGTCTCTCTCCTGCTTTTTTCACTACCA Gene GeneID:514347|PLBD2:NM_001046170:156_cdna Constitutive 1 NULL GeneID:514347 17 GENE PLBD2 MGC134065 P76 phospholipase B domain containing 2 EMBV3_03676 GCCAGTGGAGGTTCCTAAATCATGCCTTAGGTTTTGGGGTTCCCTGTATTTCATACGAGG Gene GeneID:506205|MGC138976:NM_001075245:19_cdna Constitutive 0 NULL GeneID:506205 13 GENE MGC138976 NULL hypothetical LOC506205 EMBV3_30699 CCCCCGCCCCACTAAGATTGCCCCCTCCTGAATCTGGTATTTATCAGTCTCTTGTGCTTT Gene BVT0102_205780 + 0 NULL GK000007.2:13751841-13755276 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211868 TCONS_00211866 TCONS_00211869 TCONS_00211867 1 XLOC_130028 Coding TCONS_00211866 XLOC_130028 Coding Coding FARSA 7:13741742-13753746 j TSS159118 3302 1 TCONS_00211866_3 364 0.2595396729255 9 0.725651920353245 8.52006616061324e-09 0.000531396373272254 1.3996270338454e-08 1.97341191845721e-34 0.000146445130231171 2.49264638150646e-13 0.000418117574852257 1.27765324917873e-14 0.000196019772685135 1.88993493869425e-15 0.000146466975506606 6.38817249770342e-09 5.89955823781716e-06 8.01510516012407e-60 0 0.00130358995551704 0.000402670450964393 0.00449923789965702 3.30614092024328e-27 8.76952795775601e-07 0.000308290899325829 1.68977130717737e-12 9.86327712344409e-12 0.000249100447070935 0.000207781417972393 0.000368180800887021 1.42276378082936e-10 0.000371293002745572 3.39576023845578e-08 0.000175806568877468 NM_001101107.2 FARSA Bos taurus phenylalanyl-tRNA synthetase, alpha subunit (FARSA), 0.0 1600 99.89 0.269230769230769 NM_004461.2 FARSA Homo sapiens phenylalanyl-tRNA synthetase, alpha subunit (FARSA), 0.0 1177 89.91 0.263779527559055 TCONS_00211866_3 sp|Q9Y285|SYFA_HUMAN SYFA_HUMAN Phenylalanine--tRNA ligase alpha subunit; 0.0 538 93.93 0.766483516483517 1 coding 0 0 0 0 -0.0784232887123314 0.528215382961343 -0.0574486092189983 0.381068724134132 GGTTCTGGTAGCCGGCAGGGACACGCGGAGCGCACTGGGAGCAACCATGGCGGACGGTCCGGTGGCGGAGGTGCTCCTGCGGCGGCTGGAGGCGGCCGATGGCGGCCTGGACAGCGCGGAACTGGCGACCGAGCTGGGCGTGGAGCACCAGACTGTGGTGGGCGCCGTGAAGAGCCTGCAGGCGCTGGGTCAGATCATTGAGACTGAGCTGCGCTCCACCAAGCGCTGGGAACTTACTGCTGAGGGTGAGGAGATTGCCCAGGAGGGCAGCCACGAGGCCCGGGTGTTTCGCAGCATCCCCCCAGAGGGCCTGCCCCAGAGCGAGCTCATGCGACTGCCCAGTGGCAAGGTGGGCTTCAGCAAGGCGATGTCCAACAAGTGGATCCGGGTGGACAAGAGTGCTGCTGACGGGCCCCGGGTGTTCCGAGTGGTGGACAGTGTGGAGGATGAGGTGCAGCGCCGGCTCCAGCTGGTCCGGGGTGGGCAGGCTGAGAAGCTGGGAGAAAAGGAGCGGAGTGAGCTCCGGAAGCGGAAGCTGCTGACTGAAGCGACCCTGAAGACCTACTGGGTGAGCAAAGGTAGTGCCTTCAGCACCAGTATCTCCAAGCAGGAAACAGAGCTGAGCCCAGAGATGATCTCCAGCGGCTCCTGGCGGGATCGGCCCTTCAAGCCCTACAATTTCTCGGCCCATGGCGTCCTCCCTGACAGCGGCCACCTGCACCCGCTGCTCAAGGTCCGCTCCCAGTTCCGGCAGATCTTCCTGGAGATGGGGTTCACCGAGATGCCGACCGACAACTACATTGAGAGCTCCTTCTGGAACTTCGACGCACTCTTCCAGCCCCAGCAGCACCCGGCACGTGACCAGCATGACACCTTCTTCCTGCGAGGTCTAAAGAAGTGGGTGGAGGTTGGAAACTCTGGGATCTTCCGCCCTGAGATGCTGCTGCCCATGGGGCTCCCTGAGAATGTGTCAGTCATTGCATGGGGTCTCTCCTTGGAGCGCCCGACGATGATCAAATATGGCATCAACAATATCCGGGAGCTGGTGGGCCACAAGGTGAACCTTCAGATGGTGTACGACAGTCCCCTGTGCCGCCTGGACGCTGAACGGGGGCCCCCTTCGACACAAGAGGCTGCGTGACATGAGCTGCCCCCCATAGGCCACCTTCCCCAAGGCCCTGCTACCCCCTTGCATCCCTGCCAGTGACCCCCTTGTATTTATGAGGCCTCTGTGAGGCCCATCCCCCTGCCCCGGTGTCTCCTCTTCCTGATCAGCCCCAGGGTCCTGGGAACAGGGGAGCGGGTAGCAGGTTCATTCTGTTGTCCACCCGTGAGGGTGGGCCTTGGGGAGCCCTGCAGGCCAGCTGTTGGCTAATAAAGTGGGCATGTGCCCTCATCTGGTGCCTTTCCTTAGGGGTAAAAGGTGCTGGAGCCCTGGGTGTAAGACATGATGGGTTGGAGGTCTTGGATCCTGGGGACCTCCTTGGCCAGCCTGAGTCATATCCCCACCAGGGAAGACTGGCTCCGTCAAGCATTCATCAGTTTACTTCCTGGTGCCAGGTCTCTTCTAGGTGAAGGGGATAGAAACCCTTACCCCTGTGGAAGGGGTGAGTCCAGGGTGGTGGTGGGGCCCTGGGAACCAGGATTCCCACTGATTGGGAGTCAAGCATTGGTGGGATGGGGTGGATAGCCTTATTTATTTACTTTTGGCTGTGCTGGGTCTTTATTGTGGCCTGAGGGTTTAGTTGTCCCAGGGCATGTAGGATCCCTGACCAGGGATTGAACCTAGGTCCCCTGCATTGGAAGGCAGGTTCTTAACCACTAGACCACAAGGGAAGTCCCAAGCTGAGCCTTTAAAACTGCTTTTTGTTGTTGTTGTTAAAGAGCAGTTTAGTTTCAGGTTCATAGCAAAATTAAGTGACAGGTACAGAGATTTCTCAAACCCCCTGCGTTGATGGCATCGTAATCACCCACGGTCCATAGTTTACATTTCGGTTGACTCCCCATGTTGTATGTGGCTTTGGATAAATGTATGCTGACATGTGGGCTTCCCTGGTGGCTTATTGGTAAAGAATCCATTTTCTTGCCAATGCAGGAATGCAGGTTCGATCCTTGGGTCAGGAAGAGCCCCTGGAGGAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAAATCTCCTCCAGAGGAGCCTTGTGGGCTACAGTCCAAAGGGTCATAGTCAGACATGATAGCGACTGAGCACAAACGCATGATGACCTGTATTATGATATCCTAATGTTTCATAAATTTCACTTCCCTAAAAGTCCCCTGTGTTACACGAATTCATCCCTTTGTCCTCCCCCTAAAAAGCTACTCTTAAAAAAAAAAATCTCATAAGGATTTCACATGAGCCCAGAATAGAAACATGAGTGAATAGGATAAAGTTCCATGAGCCTACCGCTCACACTGACTAGTGAGCACACCTGTTTCTGTGAAAATATTTCAAAGCAAACCCCAGGAATTCCCTGGTGGTGCAGTGGTTAAGACTTCAAGCTTCCAGTGCAGGGGGTGCAGGTTAGATCCCTAGTTAGGGAACTAAGACCCGATGTGCCACTAGGCCTGGAAATCCCAGCAATCTTGTCACCCACCCCAGAGCAGCGCACTTTGGGAAACATGGACAGCTTTTATGTAACCATGAGGTCACTTTTATGCCCAGTGCAGTTAGCAGTCAGCTGGGTTCTTTTTGGTCTCAGGGCCTGTGGGTACCAATCTTACAAGGGCTCCTCACTCACATCTTTTATTTCAAAGAAAATAATCCAGTCATACAGAAAAATACTTCTTCATTCAATAAAGGTGCATCTCTTTTAAGTGCCAGCAGTGGGTAAAGTTGTTCCAGGTCCCTGCCTTTTAAGAGCTGACACTGTGTTATCTGTGGATGAAGAGATAAATACCGAAACGGAGGGAAGAGTAGAAGCCATGTAAAAAGTAAAGGTTAGTGAGGATGAAACATTTATAATACAAAGCATAATAAACACCCAAGAATCCACCCCTAGTTCTTTTGAATCTGAACAGATATTTGCACTGGATCTTTCACTTAGATCTCTGTGACTAATGTTTTGAAGACCCTTAGGAGCTTGTTCTAGTTTCTTTTGCCCCCCGCCCCACTAAGATTGCCCCCTCCTGAATCTGGTATTTATCAGTCTCTTGTGCTTTTAAACTTTTGCTATTTACATGTTACTTTAACAAGACATGGTTTCATTTTGCATGTTTTCAAAAAAGTTACACAAACTGCACCATAAAAATCATCCTGCACCTTCTG EMBV3_14106 ATTGACCGTTTGGGTGTTTAAAGCTTCTGACCTTACCACACTCTGCCCTGTTCTGGGTCC Gene GeneID:510325|KIAA1539:NM_001014893:41_cdna UTR3_Alt 2 NULL GeneID:510325 8 GENE KIAA1539 NULL btKIAA1539 EMBV3_11031 CAGATAAGAAAAATGAGGATTCTTGAGGGAGCCACTCCACCATGCTGTTAAGACTCTGGC Gene GeneID:782935|FAM19A1:NM_001099727:71_cdna Constitutive 0 NULL GeneID:782935 22 GENE FAM19A1 NULL family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 EMBV3_13673 AGCGGGAGGAGGTCGCGGCGGCGGGAAGATGGCGCCTTCTCCCACCAAACGCAAAGACCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27312 ATTGGTATGCCCTGTGATGCAGCTTTGACCACACCCAAGGTGAAGGCAGCGCAAGAAACA Gene GeneID:514529|IL27RA:NM_001098028:25_cdna Constitutive 0 NULL GeneID:514529 7 GENE IL27RA MGC148948 interleukin 27 receptor, alpha EMBV3_08590 GGCCCTTTTCTACAACATTGCCACAGCCTTCCTCAACCCCGTCATTTATAGCCTGAGGAA Gene GeneID:100298641|LOC100298641:XM_002686445:448_cdna Constitutive 0 NULL GeneID:100298641 3 GENE LOC100298641 NULL similar to olfactory receptor Olr1654 EMBV3_37603 TGTCTCACCCATGCCCTTCTCCCTTGGGCTCTGAGGAAATATTGTTGACAGTAGCTTTCG Gene GeneID:407143|HDGFL1:NM_001001136:41_cdna Constitutive 1 NULL GeneID:407143 23 GENE HDGFL1 MGC134197 hrp-4 hepatoma derived growth factor-like 1 EMBV3_07212 ATTTTAATGAAAACACAGCAGCACCTAGAAGATGTGGAGAATGAGCTGGCAGTACAAGTT Variant GeneID:539779|RUFY2:XM_002698900:69_cdna 673^789 1 EMBV3_14927 GeneID:539779 28 GENE RUFY2 NULL RUN and FYVE domain containing 2 EMBV3_16653 CATTTAACTGCATCCCCGTGGACAGTGCTGTGGCAGTGGAGTGTGATGAACAAGTTCTGG Gene GeneID:614285|UVRAG:XM_002693472:83_cdna Constitutive 0 NULL GeneID:614285 15 GENE UVRAG NULL UV radiation resistance associated gene EMBV3_36335 TGCTGATGGCGGGGAGCGGCGGCCGCGGAGTATTGGACCAAGTACGGACCTTTCTCCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29223 GAGAGGATAATCCTGTCTGTCATTTACCAGATCACTGATGGGATGCCAGTGGCGCCCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31669 GGTCCAGCACGTTTTTATCTGCATTGTTAACCTGCCTTTCTCACCCAGGAAACCAACCCC Gene BVT0102_205971 + 0 NULL GK000001.2:118539348-118612163 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001923 TCONS_00001920 TCONS_00001921 1 XLOC_000476 Coding TCONS_00001921 XLOC_000476 Coding Coding SERP1 1:118536946-118541652 = TSS992 3242 1 TCONS_00001921_6 99 3 0.311583421891605 0.0133403202522901 0.0071000449226435 0.00735701979221582 0.00937065633415263 0.00669170123452621 0.00264750030901816 0.00588135379438557 0.010965844171585 0.0145099372886087 3.24350376285296e-05 3.50241007922959e-05 6.34374133447005e-16 0.00115979338772653 0.00181382594277902 0.00174290563784653 0.00105586852418423 0.00397161512381274 0.006145329868226 0.0061615027502641 0.00360990173104115 0.00217321966771355 0.000209406695581562 0.000210623931918311 0.00353734998697677 0.00925042452184424 0.00763945353306386 0.00509190736213617 0.000653133100629625 0.00052250340250438 0.000557727380599953 NM_001114083.2 SERP1 Bos taurus stress-associated endoplasmic reticulum protein 1 (SERP1), mRNA. 0.0 1481 100.00 0.252930289944479 NM_014445.3 SERP1 Homo sapiens stress-associated endoplasmic reticulum protein 1 (SERP1), mRNA. 0.0 3005 80.97 0.98673658235657 0 coding 0 0 0 0 0.58302513123808 0.136888597668401 -0.103935478786432 0.37605993047401 GCAGGGCTAGGGTCGGTGCGCCGGACTTCACCCTCCCTCTCCGTCTTCCTCAGCAGGCGGAGCCTGCACTTCCGCGGGGCGGGGCCAGTCCAGTGCTGACGTTGGCAGCGGATCCCGAAGCAGTTTGAGGCGACGGGCTGCTGCACTGTCTCGTTGTTGCGTTGTGTTCGTTTCCTTCCTCTTACATTCCACGCTCCCGGCGGCGGCCAGAGCGGCAGCGCGAGAGTATTCTGGCGGCCTGCTCTGCACCTCCCGCGCGCCCGCCTCGCTCGGCCGGACAGTCCGGCGTCGTCAGTCGGCCCGCGCCCCGCTAGGGTTCAGACCCGGAGCCCGCCTCGCCCAGGCCCAGTGGTCGGAGCTAGCGCCCCGCCTGAGAGCCCCCTCGCTCTGGCGGCGCGGCCACCGGGAGCGGAGCGTCGGTCGCAGCGGCCCGAGAAGAAGCGAGCGAGCGAGACCGAGGGGGTGGCCGGGGCAGGTGGTGGCGCCGCGAAGATGGTTGCCAAGCAGCGGATCCGTATGGCCAACGAGAAGCACAGCAAGAATATCACCCAGCGCGGCAACGTCGCCAAGACCTCGAGAAATGCTCCTGAAGAGAAGGCGTCTGTAGGACCCTGGTTATTGGCTCTCTTCATTTTTGTTGTTTGTGGTTCTGCAATTTTCCAGATTATTCAAAGTATCAGGATGGGCATGTGAAGTGACTGACCTTAAGATGTTTCCATTCTCCTGTGAATTTTAACTTGAACTCATTCCTGATGTTTGGTATCCTGGTTAAAAACAATTCAGTAAAGCATCCTGCCTCAGAATGACTGTTCATATCATCCTTCATGTGTCATTCCAAGGTTTCTTCACAAGTCATTCCGAGTTTTCTAGTCCATACCACAGTGCCTTGCAAAAGCACCACATGAATAAAGCAATAAAATTTGATTGTTAAGCTACAGTAGTGGACCCTACTTATTCAGTCAGTAAAGAGTAAGTTTTTGGTTTTTTTTAAATGTGGTTATTAGAACAAGATATAGAATAGAAAATTAGATCAAATCTATGTAGACAGGGTCTAGATTTTGTTAGCCCAAATGTGTAAATGCAGTTAGCTTAATTTAAAATTTGGAATCCTACAGTTTTTATATAGCTAGGCACTTTATTACTATTTCTTGAATTGAAAGCACACTCCCACAGAGGGTCGTGTAACTGTCCTGTAATAAGGTACTTACAAATGGAACAACTACACGGCTAGCCTAGTTTTCCCACAATCTTTTAGCACCTAAAATTTTTTAAAAGCTTCTAAATGCCCGATATAAAGGGAGATGCTTACACCCACAATGTCTATTTTAACATTATTATTTCTATTACACTACCTTGGATTGTGCATGAGTGAATATACTAACCGAGGATGCCCTAAGAAAACAACTTGGTTGAGCATTTTATAACTTAATCACTTCAGTTTCACTAAAAGTAGCCATGGTGGAGTAAAGTCAGGGAAGGTTTTTTAATATCACTGTTGATTTCACCAGAATTACTTTAATATATCAAAGGGGTCTATTATGGTGAACAACATTTTAGGGGAAAATACTACTAAAAATGGATGCCTCACCAGGACATACTATTGAGTCCAGTGTGCCATAAGACATCTTAGCATGTTGATAGCACTTTTAATACCAAAAAGGCACATCAACTGAAAAGTTACACTTAGTTTGGAAATGCTTTTCTTGATTTATGGTTAAAATTCTGTTAGGATACTAGATATATCAGACTCAAGTGTCATTGGGAATTAAATGGATTTACTGATAAGAATCAGTCCTTAGTCTTCCCTTTGTTATATGGTTTTACAGGTTATGATTGATCAGACTTTGTTTTTACTAATGGTAAGGGTGAGTGATAAGGCAGGTTTGAGGTTTACTGGTACTGTTGAAAATTTCAAGTATTGGCTATTTAAATACTTAGCCCTAAGGTTGATGAAAAAAGCCTGAGAGGTGTCTGTGTGTTAATGAATTGGAGAGAAAGCTGCTTGTTTGCTTTGTTGATTGCCTCAGGATATCTCTTTAAAATAAGCTGTTTTAAGAGGAGCAGAAGGGAAATCTACTACCTAGTCTATACAGTAAGAACCTCAAAGCTTCTGATAGCCCTAAGTATGGGGGAGAGTGAGCGAGAGGAGTGGTTAGGATGGTCCTTGACTGCTCTGGAATAGGAAAGGAATCCGCTGACCTTGGTCCAGCACGTTTTTATCTGCATTGTTAACCTGCCTTTCTCACCCAGGAAATCAACCCCTGTGTTTGTTTCCCTCTTGGTTAACTAATTCTATTTTATTGTACCTTTAAAAATGAAATTTATTGTTCTAAATTCATAGCAGGTGCCTTAGTCTTTGCTTTTGAGTCAAACTATTCCATATCTCCATATCAGAATTTCCCTTTGGTTTACTATAGATAGTTGGCTTTAAAACATTTGAGTTTTTTTTTTTAACAATGTCTATTAATTTGATTGTTAAATTGCCATAGTGAGCAATCATTTTACATATGTAAAGTTGCATTCCCTTTGTATTTCATATGTAATTACCAATTGGGTGCATTTTATATTAAGGATGGATTATGCATGTTTGGGTCAATGAAAGCTATGTCTTATTTGATTTACCCTTTAAAAATAAAGATCCCTGAATAGTTGATGTTTTCTAAAAGGAAATGATTTTGTAGAGTTCTTAATCTGAGTATACTTTTTATAGTTAATAGAAGATGATTTTAAGGAACGCCTGGTATGTTGTACTTGAGTTAGAAGAAATAGTACCCAGAGGCACAAATTTTAAGGTTAATAACTGGTAATAGGTACTAAGAAAAATATATAAAAGCACAATGAGTTAAATACTTTCCCACGTGGAATTTACCTTCACCTCATTATTTGAGTCTGGTACAAGGAAAAAGCACAGTTTTTTTGATCTCCCTTTCCCAGTTGAATTTTATATGTCACCTAATGTTGAGTACAATGTAGAGAATAAATACTTTATTGGGGTGGTCTGCATTATCCAATTACTCTTTTGTAATTTAGCTATAACATATCAAGGAGTTGTCAATGACTTCATTTTATCTGTTGGATTGTATATAATGTTGCTCAAAGTAATTAAGTGGGTTTCCAAAATAAGTGAAGATTTTCATTGTAACAGGATGCATTGTAATAGACTTTTATTTACATTAAAGAAGTGTATATATTCAACCGCAAGGCCATGGCTCTTCTCACTGAGGTTCCTGGAGTTTTGGCAC EMBV3_14586 TCTCCTGCATTGCAAGTGGATTCTTTACCACTTAAGCCACCTGGGAAGTCTTAATATAGC Gene GeneID:407209|Sgce:NM_001075145:21_cdna Constitutive 0 NULL GeneID:407209 4 GENE Sgce NULL sarcoglycan, epsilon EMBV3_06046 GTGCTGCAGAAGTTCGTACAAAACAAGTGGCTGATTGAGAAGGAAGGGGAGTTCACCCTG Gene GeneID:534249|NSMCE1:NM_001035406:8_cdna Constitutive 0 NULL GeneID:534249 25 GENE NSMCE1 MGC127220 non-SMC element 1 homolog (S. cerevisiae) EMBV3_36819 ATTGCCAGGTAATTGCGCATCCCAGGCATGGATCCACGAAATTTGGAAGGACCAGCAAGA Gene BVT0102_443943 - 1 EMBV3_02322 GK000018.2:52446107-52462833 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083956 1 XLOC_051412 Coding TCONS_00083956 XLOC_051412 Coding Coding ZNF234 18:52457551-52486897 j TSS62983 1857 1 TCONS_00083956_6 516 6 0.936922814789572 0.00113720271785327 0.00137183171490696 0.00175560818575144 0.000941054293739693 0.00287164015877859 0.00121807334723288 0.000761091850076929 0.00218415455556796 0.00244478891789072 0.000275096055374423 2.21398134864082e-05 0.000148873470915134 4.50233571968988e-05 0.00290435444790856 0.000298496072188681 0.000576039226734956 0.000526058119240885 1.32227591586064e-42 0.00767970682367191 0.00191129406775925 0.00225870988766598 0.00172595810092276 0.000111083727997421 0.000196462649090545 0.0014587310770973 0.00481526271561362 0.000120848646233518 4.34922474201223e-25 5.95051897583405e-06 4.04715223991393e-41 NM_001102350.1 ZNF226 Bos taurus zinc finger protein 226 (ZNF226), mRNA. 0.0 2167 90.73 0.845988152934841 NM_001032372.1 ZNF226 Homo sapiens zinc finger protein 226 (ZNF226), transcript variant 0.0 1148 79.34 0.72428648357566 TCONS_00083956_6 sp|Q9NYT6|ZN226_HUMAN ZN226_HUMAN Zinc finger protein 226; 0.0 683 65.15 0.998062015503876 7 coding 0 0 0 0 0.0276524984440965 0.789719599922837 0.0131838370043483 0.793071051508323 GCGGGCATGTCAGTTCCGCGTCTTGCTGGTCCTTCCAAATTTCGTGGATCCATGCCTGGGATGCGCAATTACCTGGCAATCGACTTAGGGGAAACGAATCCTCGGCGCAGAGTGCAGACTCTCAGTACTCTCTCAAGACAGTTCTGACCTCCTAGAACCTGTATAATTCAGGACTGTGCCCATCCCCAGGCATAGGAAGAAACATGACCACATTTAAGGAGGCAGTGACCTTCACGGATGTGGCTGTGACCTTCACGGAGGAGGAGTTCAGGCTGCTGGACTCGGCCCAGAAGAAGCTGTACCAGGATGTGATGCTGGAGAACTTCCGGAATCTGGTCTCAGTGGAAGAAAAGATCCAAAGTGAGATGGAGACTATTTCAGAAGTAGGACCACATGAAGAGCTTTCCTGCTGGCAAATCTGGCAACAAATTGCTAACGACTTAACCAGATGTCAAGACTCCATGATAAATAATTGTCAGCTCCACAAACAAGGTTATTCCCTGCACCAGGTTGGGTCAGGACTATCTATTCAAATTTCTGAAGATGAGAACTATATATTAAATGAGAAAGCAGGTGGTCCTGGTGATACTGGAAATCCAAGGTTTGCATCTTTGAGAGCCCGGGATTCTTGGAGAAAAAGTTCCTTGACTGAGTCACAGAATTACCAGAATAGATACCAGGAAATTTCCACGCAAAGTAAACTGTGTCGGTGTAAAGCGGATGTTGACAGCATTGGTCGGATCTCATACCACCTTGATGATCGAGGAGTACACAAGAATGAAAAGTCTTATTGCCACAATGATTATAGAAAAGACAGCACGGTTTCCACATTGGATCAGAATAGTATGATTCACACAGGACAAAAACCTTACCAGTGTAATGAATGTAAAAGAACCTTTACCAGCCTTTCTACCTTTGATCTTCACCAGCAGTTACACTCAAAAGAGACCTCTCACGTGTGCGATGAGTGTGGAAAAGGCTTCCGTTATAGCTCAGTTCTTCATATTCATCAGAGAGTTCACATAGGAGAAGAATGCAGTGTGTTTGCTGAGTGTGGAAAGGAATTCCATCAGAGCTCACAACTACAAACTCATCAGAAAGTCCACAGCATAAAGAAACCATTCACATGTGAGGAATGTGGGAAAGGCTTCAGTCGTCGATCAGCACTTAGCATTCATTGTAAAGTCCACACGGGAGAGAAACCTTACACTTGTGAGGAGTGTGGCAGGGCCTTCAGTCAGGCCTCCCACCTTCAAGACCATCAGAGAGTCCACACCGGGGAGAAACCATTCATATGTGATGCATGTGGTAAGAGCTTCAGTCGGAATTCACACCTTCAAGCCCACCAAAAAGTCCACACTGGAGAAAAGCCATACAAATGTGAGGAGTGTGGGAAGGGCTTTAAGTGGAGCCTGAACCTCGACATGCATCAGAGGGTCCACACAGGAGAGAAACCATATAAGTGTGGGGAGTGTGGGAAGCACTTCAGTCAGGCCTCAAGTCTTCAGCTTCATCAGAGTGTCCACACTGGAGAGAAGCCCTACAGATGTGATGTGTGTGGTAAAGTCTTCAGTCGGTCTTCACAACTGCAGTCTCATCAGAGAGTCCACACAGGGGAGAAACCTTACAAGTGTGAGATGTGTGGTAAGAGCTTCAGTTGGCGCTCCAATCTAACAATTCATCAAAGAATCCATGCTGCTGATAAATCCTATAAAAGTCATAGGGGTGGTAAGACCATCAGAGATTCAACTTAGAAAAGTTCATTAAAATGATTTTTTAAAAACTCAAGTGTCATGTGAATGCTTCCAGTTGTCAAGTTCAAAAGAAAAAAAAAATCATTTGTTTCATTAAAAAGTC EMBV3_25088 GAGCTCAGGGCTGTGTTCCTGTGTTGCTGGAGAATTTGTGTGGTATGTCTTGCTCTGGAA Gene BVV0102_342040 + 1 EMBV3_40477 GK000023.2:27604059-27613928 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00156845 TCONS_00222010 TCONS_00036105 TCONS_00177050 TCONS_00218903 TCONS_00011813 TCONS_00207277 TCONS_00238305 TCONS_00116428 TCONS_00142231 TCONS_00064414 TCONS_00115687 TCONS_00251705 TCONS_00218448 TCONS_00152743 TCONS_00030297 TCONS_00230670 TCONS_00177841 TCONS_00223441 TCONS_00098386 TCONS_00186108 TCONS_00110373 TCONS_00156835 TCONS_00252934 TCONS_00251760 TCONS_00124583 TCONS_00175194 TCONS_00153777 TCONS_00148196 TCONS_00009883 TCONS_00148453 TCONS_00252675 TCONS_00199628 TCONS_00252489 TCONS_00135547 TCONS_00009945 TCONS_00175255 TCONS_00252954 TCONS_00251662 TCONS_00251930 TCONS_00117502 TCONS_00011804 TCONS_00161191 TCONS_00208127 TCONS_00199603 TCONS_00021596 TCONS_00251524 TCONS_00123618 TCONS_00019980 TCONS_00039853 TCONS_00011198 TCONS_00107584 TCONS_00030295 TCONS_00251846 TCONS_00066192 TCONS_00063903 TCONS_00089138 TCONS_00199596 TCONS_00089951 TCONS_00199595 TCONS_00040147 TCONS_00036106 TCONS_00130259 TCONS_00115736 TCONS_00175572 TCONS_00007555 TCONS_00231613 TCONS_00250654 TCONS_00110387 TCONS_00251673 TCONS_00239592 TCONS_00238304 TCONS_00078479 TCONS_00125001 TCONS_00039908 TCONS_00229751 TCONS_00218881 TCONS_00122013 TCONS_00030202 TCONS_00080733 TCONS_00070957 TCONS_00229410 TCONS_00007501 TCONS_00088868 TCONS_00199062 TCONS_00056728 TCONS_00110644 TCONS_00178022 TCONS_00209870 TCONS_00047865 TCONS_00160965 TCONS_00249137 TCONS_00251627 TCONS_00066279 TCONS_00179810 TCONS_00218865 TCONS_00117681 TCONS_00219970 TCONS_00116955 TCONS_00197184 TCONS_00007719 TCONS_00238326 TCONS_00123643 TCONS_00056819 TCONS_00019198 TCONS_00031911 TCONS_00119942 TCONS_00124043 TCONS_00071185 TCONS_00142493 TCONS_00040860 TCONS_00185942 TCONS_00056147 TCONS_00188225 TCONS_00190322 TCONS_00239418 TCONS_00070840 TCONS_00071079 TCONS_00037791 TCONS_00063487 TCONS_00030941 TCONS_00010780 TCONS_00223365 TCONS_00156829 TCONS_00210172 TCONS_00209529 126 XLOC_131641 XLOC_095305 XLOC_135319 XLOC_021081 XLOC_106824 XLOC_132222 XLOC_007363 XLOC_125795 XLOC_144972 XLOC_070595 XLOC_086656 XLOC_039138 XLOC_069856 XLOC_154646 XLOC_131768 XLOC_092508 XLOC_016551 XLOC_140160 XLOC_107614 XLOC_136741 XLOC_058632 XLOC_112161 XLOC_066277 XLOC_095295 XLOC_155875 XLOC_154701 XLOC_076127 XLOC_104977 XLOC_093539 XLOC_090079 XLOC_005436 XLOC_090333 XLOC_155616 XLOC_121281 XLOC_155430 XLOC_081770 XLOC_005497 XLOC_105038 XLOC_155895 XLOC_154603 XLOC_154871 XLOC_071668 XLOC_007354 XLOC_098083 XLOC_126640 XLOC_121256 XLOC_012269 XLOC_154465 XLOC_075170 XLOC_010658 XLOC_023670 XLOC_006749 XLOC_063494 XLOC_016549 XLOC_154787 XLOC_040909 XLOC_038629 XLOC_053924 XLOC_121249 XLOC_054732 XLOC_121248 XLOC_023964 XLOC_078970 XLOC_069905 XLOC_105353 XLOC_003116 XLOC_141101 XLOC_153597 XLOC_066291 XLOC_154614 XLOC_146258 XLOC_144971 XLOC_047367 XLOC_076544 XLOC_023725 XLOC_139245 XLOC_132200 XLOC_073569 XLOC_016457 XLOC_049617 XLOC_042734 XLOC_138905 XLOC_003062 XLOC_053654 XLOC_120715 XLOC_034531 XLOC_066546 XLOC_107795 XLOC_128381 XLOC_027997 XLOC_097858 XLOC_152080 XLOC_154568 XLOC_040993 XLOC_109580 XLOC_132184 XLOC_071847 XLOC_133287 XLOC_071121 XLOC_118846 XLOC_003279 XLOC_144993 XLOC_075195 XLOC_034622 XLOC_009878 XLOC_018156 XLOC_073015 XLOC_075595 XLOC_042957 XLOC_086918 XLOC_024674 XLOC_111995 XLOC_033950 XLOC_114268 XLOC_116357 XLOC_146084 XLOC_042617 XLOC_042852 XLOC_021620 XLOC_038214 XLOC_017192 XLOC_006331 XLOC_136665 XLOC_095289 XLOC_128682 XLOC_128040 Coding TCONS_00223365 XLOC_136665 NonCoding NonCoding - 7:99197616-99198194 - TSS167363 578 1 TCONS_00223365_1 46 0.998269896193772 1 0 0.000120648814424882 6.20409940898881e-05 5.51405551987913e-05 7.67844353482926e-05 2.53681650352793e-05 0.000349004910194905 6.67386467464298e-05 9.48956839952509e-05 0.000136259884344415 0.000309839721293351 0.000106745086248943 9.34329214631254e-05 5.07325207223975e-05 7.83485220371222e-05 0.000264162962598948 0.00439530801700214 0.00120968757694069 0.0042704637380745 3.04795312933588e-05 4.11579086485804e-05 7.71600047162288e-06 0.00131452670583257 0.00344702967144713 0.00588780578812554 6.32849547407575e-05 8.55096297502652e-05 7.47435494178299e-05 0.000452121394965465 0.000429115516678603 0.00059472107130323 XM_001250798.4 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant 2, mRNA. 2e-13 80.6 94.23 0.0882352941176471 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 ACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATGGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATTGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATGGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAG TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 EMBV3_37228 CCACTACCCGGAAAACCTCTCTGAAGGATGGCTTGCAGGTCTCACGTGACCGTGAGTCTT Gene BVV0102_341223 + 1 EMBV3_08983 GK000006.2:119356881-119388903 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34280 GTCCGGAAGGACGACTTGCACAGAAAGAGACTGCAGCTGTGGAAGTCCCACTGGGCAGCA Variant GeneID:508598|TMEM11:NM_001097998:493_cdna 517^728 2 EMBV3_36910 GeneID:508598 19 GENE TMEM11 NULL transmembrane protein 11 EMBV3_08458 GGTATCCTGCAAAGCACTGAAACTCTGTCCCCATTCTGCATGTCCACTGTATCTCTCAGG Gene BVT0102_325564 + 0 NULL GK000019.2:24913054-24933749 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13204 CCGCCTGTGCACTGATGGTCATAATAGTAATTGTGGTGGTCCTCTTCCAGCATTTCCGGA Gene GeneID:540423|MPZL2:NM_001015673:122_cdna UTR3_Alt 4 NULL GeneID:540423 15 GENE MPZL2 EVA1 myelin protein zero-like 2 EMBV3_04101 ACAGGAGAGAGGCCCTTTCAATGCGACATCTGTGCCAGAGGGTTCATGCAGCTCTTAGAT Gene GeneID:532036|LOC532036:XR_083964:368_cdna Constitutive 0 NULL GeneID:532036 18 PSEUDO LOC532036 NULL similar to zinc finger protein 371 EMBV3_16954 CAGAAAATTTGGTGTCATCCTCAGAGCTGATTCCCCAGGCTCCCAATGAAGTCAGAGGTC Gene GeneID:540613|ZNF507:XM_002707747:205_cdna Constitutive 0 NULL GeneID:540613 18 GENE ZNF507 NULL zinc finger protein 507 EMBV3_15846 GAAGCTTTGCGTCGAGAGAGGATGGGTCTGCAATCCAAAGTGAAGGAGATAAAAGCACTT Gene GeneID:613606|AKAP7:NM_001102266:7_cdna UTR3_Alt 2 NULL GeneID:613606 9 GENE AKAP7 MGC139521 A kinase (PRKA) anchor protein 7 EMBV3_01840 TACGAACAGCCACACCTGTCTCTGGGTGGTAATTGTGTCCTGGGTGTTTGGCTTCCTGTT Gene GeneID:787774|LOC787774:XM_002687079:245_cdna Constitutive 0 NULL GeneID:787774 4 GENE LOC787774 NULL similar to Olfactory receptor 9A4 EMBV3_17072 AGTTTTGTAGGAATATGGCTTGGAGCCTTTCCTATTCCACTGGATTGGGGAAGACCATGG Gene GeneID:768015|PIGF:NM_001077074:188_cdna Constitutive 1 NULL GeneID:768015 11 GENE PIGF MGC133893 phosphatidylinositol glycan anchor biosynthesis, class F EMBV3_36922 AGATCAACACAAAAGCCAGCGACCCGTCAGAGGAAATAAGGCATCGTTTTAGACAGCTGG Gene GeneID:541151|TRPM8:XM_002686563:2_cdna Constitutive 0 NULL GeneID:541151 3 GENE TRPM8 NULL transient receptor potential cation channel, subfamily M, member 8 EMBV3_24976 CACAGAGGATGAATTCCCCCGACCGGACCTGCCTGGGAGGGCCTTGGGTCAGTGCTCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20796 CTCTTCCCAGATGGCCACTCGGGCCCACAGGTGCTGTCCTGGGCTGGCTGATGACCCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04459 TTATTTGGAAAAGACTGGAGAACTGAAACTGCTGGCGGGGGCGCGTCTCCACGCTACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00936 CGAGAAAGTGCGAAAGGAAGTGTTCTTCTCCTTCTGCTTGGGTGAAATGATCTGTGGGGC Gene BVV0101_062345 + 0 NULL GK000015.2:43301815-43499316 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059138 TCONS_00059152 TCONS_00059141 TCONS_00059150 TCONS_00059139 TCONS_00059151 TCONS_00059153 TCONS_00059137 1 XLOC_036271 Coding TCONS_00059138 XLOC_036271 Coding Coding SBF2 15:42970762-43482361 j TSS44418 7200 1 TCONS_00059138_11 1605 40 0.98600463645284 0.000162150852794785 1.66393541074306e-08 0.000176997156921392 1.85173053753186e-05 0.00016581861353763 1.46886946026992e-11 2.55540463646841e-06 9.95276805459062e-05 0.000291450109225703 8.36849096053923e-41 7.70962393662156e-09 2.2268287711329e-48 4.28569813563132e-05 6.54039631661831e-42 7.30759990139273e-09 0.00192732945533106 1.32767303250975e-12 0.000963275948532653 0.000315712512734303 9.8507669913092e-05 5.50713140017575e-09 0.00126872336090338 0.000795558641837734 0.000984243594713761 3.44588606267928e-06 0.000129092075615875 0.000300124328961254 8.56255731464214e-09 1.53301606434701e-08 2.9105411288114e-09 NM_001103237.2 SBF2 Bos taurus SET binding factor 2 (SBF2), mRNA. 0.0 1.290e+04 100.00 0.993194444444444 NM_030962.3 SBF2 Homo sapiens SET binding factor 2 (SBF2), mRNA. 0.0 9387 89.20 0.993472222222222 TCONS_00059138_11 sp|Q86WG5|MTMRD_HUMAN MTMRD_HUMAN Myotubularin-related protein 13; 0.0 3124 94.83 0.999376947040498 0 coding 1 1 1 1 -0.0231213880166618 0.850231946513212 0.0214808596771335 0.812770157394617 TAGGCCTCAAAGTGAAGCACCCCGAGAGGCTGCTTTGACAACGCGCGGGTCAGGAGCAGGTCTGGGGAAAATAATCCAGAGATTTCCACAGAAGGACTGGGATGATACACCTTTTCCACAGGGAATTGAATTGTTTTGTCAGCCTGGCGGATGGCAGCTGTCCAGAGAGAGGAAGCAACCAACGTTTTTTGTGGTGGTCCTGACAGATATTGACTCAGATCGACATTACTGCTCGTGTCTAACCTTTTATGAAGCAGAGATCAATCTTCAGGGAACAAAGAAGGAAGAGACTGAAGGTGAAGTGGAAGTGTCTGGTTTGATTCAGCCTGCGGAAGTGTTTGCTCCCAAAAGCCTGGTGTTGGTATCCAGATTAGATTATCCAGAAATTTTTAGGGCTTGCCTGGGTTTGATCTACACTGTATATGTGGACAGTCTGAATGTCTCCTTGGAAAGTCTCATTGCAAACTTGTGTGCGTGTCTTGTCCCAGCGGCTGGAGGGTCTCAGAAGCTGTTTTCCTTGGGTGCAGGAGACAGACAGCTGATCCAGACTCCCTTGCATGACAGTCTTCCTGTCACAGGAACTAGTGTGGCTCTCCTGTTCCAGCAGTTAGGAATTCAGAATGTCCTCAGCCTCTTTTGTGCGGTCCTTACAGAAAATAAGGTTCTCTTCCACTCTGCAAGTTTCCAGAGACTTAGTGATGCTTGTAGAGCCCTGGAGTCATTAATGTTTCCTCTTAAATATAGTTACCCTTATATTCCTATTCTCCCGGCTCAGCTCCTGGAAGTTCTGAGTTCCCCGACGCCTTTCATTATTGGAGTACATTCTGTCTTTAAAACTGATGTTCATGAACTTTTAGATGTAATCATAGCTGACTTGGATGGAGGCACTATTAAAATTCCTGAATGTATTCACCTCTCTTCCCTTCCGGAACCACTTCTACAACAGACTCAAGCAGCTCTTTCTTTGATTCTACACCCAGATTTGGAAGTAGCAGATCATGCTTTTCCCCCTCCACGAACAGCTTTATCCCACTCAAAAATGCTGGATAAGGAAGTGCGTGCAGTTTTTCTTAGATTATTTGCACAACTTTTCCAAGGATATAGATCATGCTTACAGCTTATAAGAATTCACGCAGAACCAGTAATACATTTTCACAAGACAGCTTTCTTGGGACAGCGTGGTCTAGTTGAGAATGATTTCCTCACTAAAGTTCTCAATGGAATGGCATTTGCAGGTTTTGTTTCAGAAAGAGGTCCTCCCTATAGATCCTGTGATCTCTTTGATGAGGTGGTAGCTTTTGAAGTAGAGCGAATTAAAGTTGAAGAAAATAACCCAATGAAGATGATAAAGCATGTCAGAGAACTTGCTGAGCAACTATTTAAAAATGAGAATCCAAACCCTCATATGGCATTTCAGAAAGTTCCACGCCCAACAGAAGGATCCCACTTGCGAGTTCATATTCTTCCTTTCCCCAAAATTAATGAAACTCGGGTACAGGAATTAATACAGGAAAATCTTGCTAAGAATCAGAATGCACCTCCTGCTTCAAGAGTGGAAAAGAAATGTGTTGTGCCTGCAGGTCCACCTGTTGTTTCAATAATGGATAAAGTGACAACAGTTTTCAACAGTGCACAGAGATTGGAAGTCGTTAGAAACTGCATTTCATTCATATTTGAAAATAAAACATTGGAGACTGAAAAGACCCTTCCTGCTGCATTGAGAGCCCTTAAAGGAAAGGCAGCAAGACAGTGTCTCACTGATGAGCTGGGTTTACATGTTCAGCAGAACCGGGCAATATTAGATCATCAGCAGTTTGACTACATAATAAGGATGATGAACTGTACTCTACAGGATTGTTCCAGTTTAGAAGAATATAACATTGCTGCAGCATTACTCCCTCTGACTAGTGCTTTCTATAGGAAACTGGCCCCTGGAGTCAGCCAGTTTGCTTACACCTGTGTACAGGACCACCCCATTTGGACGAATCAGCAGTTTTGGGAGACAACCTTTTATAATGCGGTGCAGGAACAGGTTCGCTCCCTGTATCTCTCGGCCAAGGAGGACAATCATGCCCTGCATCTGAAGCAAAAGGATAAACTTCCTGATGACCAATATCAGGAGAAGACAGCGATGGACCTGGCAGCTGAGCAGCTACGCCTTTGGCCCACTCTGAGCAAATCGACTCAGCAGGAGCTGGTGCAGCGTGAGGAAAGCACTGTCTTTAGTCAGGCCATTCACTTTGCAAACCTCATGGTCAATCTGCTGGTTCCGCTGGATTCAAGTAAAAACAAGCTCCTAAGAGCGTCAGCCCCAGGAGATTGGGAGAGTGGGAGCAACAGCATCGTCACAAACAGTATTGCAGGAAGTGTAGCTGAGAGCTATGATACAGAAAGTGGGTTTGAAGATTCAGAGAATAATGACATTGCCAATTCTGTTGTGCGTTTCATTACCCGATTTATTGACAAAGTTTGTACGGAGAGTGGAGTTACTCAGGATCATATCAAGAGCCTGCATTGCATGATACCAGGAATTGTAGCTATGCACATTGAAACCCTAGAAGCAGTGCATCGAGAGAGTAGAAGACTTCCACCTATACAGAAGCCCAAGATTCTTAGACCTGCTCTACTGCCAGGAGAAGAAATTGTTTGTGAAGGCCTTCGAGTCCTACTGGATCCTGATGGAAGAGAAGAAGCCACTGGAGGCCTTCTTGGAGGCCCTCAGCTTCTGCCAGCAGAAGGAGCCTTGTTCCTTACCACATACAGAATTCTGTTCAGAGGGACTCCCCATGATCAACTAGTTGGTGAGCAGACAGTTGTACGAAGTTTCCCCATTGCCTCCATCACCAAGGAGAAGAAGATCACAATGCAGAACCAGCTACAACAGAACATGCAAGAAGGACTGCAGGTCACATCGGCGTCTTTTCAGTTGGTTAAAGTGGCATTTGATGAAGAAGTGAGCCCAGAAGTCGTAGAGGTCTTCAGGAAGCAGCTGATGAAGCTCCGTTACCCTCAGTCCGTTTTTACCACCTTTGCCTTTGCTGCTGGACAAACTGCCCCACAGATCATTTCACCCAAGCAGAAGGAGAAGAACACTTCCTTTCGCACTTTCTCGAAAACCATTGTGAAAGGTGCTAAAAGGGCAGGCAAAATGACGATTGGGCGGCAGTATTTACTGAAGAGGAGGACAGGGACGATTGTGGAAGAGAGAGTGAGCCGTCCTGGATGGAATGAAGACGATGACGTATCTGTTTCAGATGATAGTGAACTCCCCACGAGTACCACTCTAAAGGCCTCAGAGAAATCTACAATGGAACAGCTAGTAGAAAAAGCTTGTTTCAGAGACTATCAGCGTTTGGGTTTGGGAACCATAAGTGGCAGCTCCTCTCGCTCTAAACCAGAGTACTTTCGAATCACTGCCTCCAACAGGATGTACTCACTCTGCCGGAGCTATCCTGGCCTTTTAGTTGTACCTCAAGCTGTACAGGACAGTAGTTTACCAAGAGTAGCCCGCTGCTATCGACACAATCGCCTGCCTGTTGTATGTTGGAGAAACTCAAGAAGCAGTACCCTGCTCCTCCGATCTGGAGGATTCCATGGAAAGGGAGTGGTTGGCCTTTTTAAGTCTCAGAACTCCCCTCAGGCAGCTCCTACCTCCTCTTTAGAATCTTCCAGTAGCATAGAACAAGAAAAGTACTTGCAAGCATTACTGAGTGCAGTTTCTGTCCATCAGAAACTCAGTGGCAATAACCCTCTTACTGTCAGGCCAGCACTTGCTCTGTCTCCAGGTGTTTGGGCAAGTCTTCGCTCTAGCACTCGCCTGATCAGCTCTCCAACATCCTTCATTGATGTTGGCGCCCGGCTGGCAGGCAAGGATCACTCGACCTCCTTCAGTAACAGCACTTACCTGCAAAACCAGCTCTTGAAACGTCAAGCAACCCTTTACATATTTGGTGAGAAGTCACAGCTAAGGAACTTCAAGTTAGAATTTGCTTTAAATTGTGAGTTTGTTCCTGTTGAGTATCATGACATCCGACAAGTGAAAGCCAGTTTCAAAAAGCTGATGAGGGCTTGTGTTCCAAGTGCCATTCCTACTGACTCAGAAGTGACCTTCCTAAGAGCCCTGGGAGACTCTGAGTGGTTCCCACAGCTTCATAGGATACTGCAGCTGGCTGTGGTTGTTTCAGAAGTACTTGAGAATGGTTCCTCAGTTTTGGTGTGTTTGGAAGAAGGCTGGGACATCACTGCACAAGTGACCTCCCTGGTTCAGTTACTCAGTGATCCCTTTTATAGGACGCTTGAAGGCTTCCGGATGCTGGTCGAAAAAGAGTGGCTCTCTTTTGGTCATAAATTCAGTCAGCGGAGCAGCTTGACCCTCAGCTGTCAGGGCAGTGGTTTCACTCCGGTCTTCCTACAGTTCTTAGATTGTGTACACCAGGTTCACAACCAGTATCCAACTGAGTTTGAATTCAATCTCTATTACTTAAAGTTCTTGGCTTTCCACTATGTGTCTAATCGCTTTAAAACATTTCTCCTGGATTCAGACTATGAAAGATTAGAGCACGGAACTTTATTTGATGATAAAGGAGACAAGCATGCTAAAAAAGGAATTTGTATTTGGGAGTGTATTGATAGAATGCACAAGAGGAGTCCCATTTTCTTTAATTATTTATATTCACCAGTGGAAATAGAGGCCCTGAAGCCCAATGTAAACGTTTCCAGCCTCAAGAAGTGGGATTACTACATAGAGGAGACGCTTTCCACGGGGCCCTCGTATGACTGGATGATGCTGACCCCCAAGCAGCTGCCCTCCGAAGACTCTGAGCTGGCCGGAGGAGCCAGGCCCCAGAGCCAGAGGAGAACCGTGTGGCCGTGCTACGATGATGTCAGCTGCGCTCAGCCCGACGCTCTCACCAGCCTTTTCAGTGAAATTGAAAGACTGGAGCATAAATTGAACCAAACCCCTGAGAAGTGGCAGCAGCTGTGGGAGCGGGTAAACGTGGACCTTAAAGAAGAGCCCAGAGCAGACCATCCCCAGAGATACCCTTCAGGCTCCCCAGGAACTGTGTCCACCAACCTCCCTTTTTATCAGAAGAGGCCTCAGCTGCACCTTCCAGACAGCAACCTGGCAGAGGAGCAGAACACTGGTGTCTCCCCATCCAACGGGGTGGACCGCAGAGCAGCCACGCTGTATAGCCAGTACACGCCCAAGAACGACGAGAACAGGTCCTTTGAGGGAACGCTGTACAAAAGAGGGGCTTTGCTGAAAGGCTGGAAGCCCCGTTGGTTTGTTTTGGATGTAACAAAGCATCAGCTGCGATACTATGACTCGGGTGAGGACACCAGCTGTAAGGGCCACATCGACCTGGCTGAAGTAGAAATGGTCATCCCTGCCGGCCCCAGCATGGGCGCCCCGAAGCACACGAGTGACAAGGCTTTCTTTGATCTCAAGACCAGCAAACGTGTGTATAACTTCTGTGCCCAGGATGGACAGAGTGCCCAGCAGTGGATGGACAGGATCCAGAGCTGTATCTCTGATGCCTGATACCCATGGTCAACCCACACAGAAGAGGGAGGAAGGGCTTGTGCTGCCAGATAGGAAAAAAGTGCATGAATCCTTGAAGAGCTGACAGCTTCCTGCTCAGTTCTGATGAGTCATCCTAGGGCCTGAGGTTCTCCTGCCCAGACTTAGCCATTCCCCTCTCTCGGCAGTTGCTACATCTTCTTAGCCGGAGTAGATGTGTCACACAAGTCTGGTCAAGAGCCCCAGGCCCTCCCTGCATCGTGCACTAGGTTGTTCTAACCTAGTGGTTAGGACAATCCCTTGTGGTTAGGGATCAGAAGAATGTTTCCTGAGCCATCTGTCACCCATCCCCTAGCCAAGCGGCTACCACCCACCTGGGTCCTTCTTCATGAAAGCAGGATCCTTTCTGTTCTCCAAGGTCATAACTTCCTTGGAGAACTTCCTGACAAGCAAAACTCAAAATCCTCCAAGACTATCTTCCATTCTGCCTAGGTTTCCCATTGGAGGCTCCTGCTCTTATTGCCCAACCTTAGAGATACTTGGTTCTCTGGTGCTGCCGAAGGTGCTTCCAGGATCCCTGCTCAGCGCTGGGGTTCACAGCAAGACCACCAGTGCTCAGGCAGGCCAAGGGGCACACAGAATAGCCTGATGGGAAAGATTGGCCAGGGAATGGTGCAGTAATCACCAGGCCAATGCAGGAAAACACCGCTTCCAAAACACTGAGTTTTCCTAGGCCAAAGGTGCCCTGAGGATCCAGGACTTCATGGTCCCATGTATTCTTCTGCTCCCTGACAGCTTCTTACACAAAATAACATGCAGAAAGCTGAATGCACTAATTCACAAAACAGCCACTTGCACTGAACTCTAATAAAGTGAAGATGTTGGAGAGGCAGAAGCCAGCTGTTTATGAGCACACCACCCCTGTGACAAGGGCTGTATAGCCACGGTCGCACCGTGGCGTGACTGGATACCCAAACAGCACCTCTGCACGTGAACTTAAGGACTTGTTTAGTCGGTTAGATTTTCTGTACTTTTGATAACCTGTGTTTGTCCAGCTTGAGATACAGGAATGCTGTTTGCTCACAGTGAACAGAGACAGCTTTTCTGCAACAGCCACTGGTCAGCTGGAGTCGTAGGTAGCTAGATCATCACATTTGTTTTGAAATGTTAATATGTTAAATACCAAACTAATGTTTCAAAAATATGTATATATGATTTCTATACCCTTGTTTTTCAGGTAGTCTGCTTATAATTTAATATAAAATTAACTGATTCATTCATAAGATTTCAGTAATTTTAAAATGGTTCCCTTTTTAAAAAGCCACTTTGTAGATGAAAAATAAATCAGATTTTCAAATTTAAAATTATCTACACACTAGGAAACAGAACTGTGTTAATATATAAGAAATTCGGGGAAAATAAGAATGAAGGATTTTTCTATCATTTTCATTTTATAAATTGCCACCTGTGAAAATGTTTTTGCACATTATTTGTATTTTTCTTTGTATATGAAATAATTTTTTGTACTCTGTAAAATATGGAGCCCACTGTACCTTCAGCTATTTGAGACTTTACACAGTGCTTCTTTTGTAACTGGATTCTTTTAACTTTCATGAAGGCACTACATGCCTTGTATTCACTAACCACCTTGAATTAAACATTTCTTAAGAAAAAGCATC EMBV3_12992 ACCATTGGTAATTATGAGGCAGGACCCGAGCTGAAAGGACTGAGGAGTGCAACTCCTGAT Variant GeneID:504775|KRTDAP:XM_002695018:266_cdna 129^263 1 EMBV3_28595 GeneID:504775 18 GENE KRTDAP NULL keratinocyte differentiation-associated protein EMBV3_40401 AGGGTGACTACCAGCGCTGGATCTTGGAGAAGGTGCTGGAGCCATTGGGAATGGCAGACA Gene GeneID:523647|LOC523647:XM_002685780:613_cdna Constitutive 0 NULL GeneID:523647 2 GENE LOC523647 NULL hypothetical LOC523647 EMBV3_14909 CTTCACCATCGTCATGGGTGTGGCCTCTGGCCTCTTGACAGGTTTGCTCTTAAACCTCAA Gene GeneID:282685|LOC282685:NM_174712:36_cdna Constitutive 0 NULL GeneID:282685 2 GENE LOC282685 MGC140490 rhesus-like protein EMBV3_40150 ATAAGATGTGGCTCCTCCTGGTGTCTGGCTGCTGGTTTCTGGGATCAGTGGATGGCTTTA Gene GeneID:788361|LOC788361:XM_002689108:50_cdna Constitutive 0 NULL GeneID:788361 7 GENE LOC788361 NULL similar to Olfactory receptor 2T4 (Olfactory receptor OR1-60) EMBV3_31070 GTGAGAAAGTAGGTATGGCCTGAAAGATAGAAGGGGATTGAGTGCAGAAGTTCCCATTTG Gene GeneID:618104|LIN52:NM_001102316:226_cdna Constitutive 1 NULL GeneID:618104 10 GENE LIN52 MGC165675 lin-52 homolog (C. elegans) EMBV3_36132 GGCGTCCCAGTCTGCCATCAGACCCAGCAGAAGCAGGCGCCTACCTGGCCAGGCAAGTAA Gene GeneID:505154|LOR:NM_001113757:76_cdna Constitutive 0 NULL GeneID:505154 3 GENE LOR NULL loricrin EMBV3_01422 TGCTTCCTAAGGCCTACTTGACTTCACACTCCAGGATTTCTGGCTCTAGGTGAGTGATCA Gene BVV0101_075031 - 1 EMBV3_13081 GK000003.2:49225715-49392813 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166765 TCONS_00197742 TCONS_00218274 TCONS_00139137 TCONS_00135762 TCONS_00009527 TCONS_00210080 TCONS_00153865 TCONS_00178988 TCONS_00174045 TCONS_00177366 TCONS_00142407 TCONS_00218276 TCONS_00022599 TCONS_00188922 TCONS_00020502 TCONS_00108328 TCONS_00168787 TCONS_00199862 TCONS_00229762 TCONS_00189172 TCONS_00137108 TCONS_00116491 TCONS_00254894 TCONS_00130890 TCONS_00098773 TCONS_00233768 TCONS_00029762 TCONS_00229954 TCONS_00254888 TCONS_00251157 TCONS_00072967 TCONS_00090494 TCONS_00100004 TCONS_00174047 TCONS_00007111 TCONS_00124450 TCONS_00010491 TCONS_00154504 TCONS_00141382 TCONS_00233467 TCONS_00110405 TCONS_00254319 TCONS_00152757 TCONS_00079500 TCONS_00208891 TCONS_00032442 TCONS_00107767 TCONS_00108677 TCONS_00093622 TCONS_00107618 TCONS_00129690 TCONS_00031148 TCONS_00067021 TCONS_00109794 TCONS_00029718 TCONS_00221660 TCONS_00148150 TCONS_00049295 TCONS_00197267 TCONS_00116868 TCONS_00176068 TCONS_00193505 TCONS_00142520 TCONS_00040840 TCONS_00247351 TCONS_00199772 TCONS_00197087 TCONS_00180497 TCONS_00048090 TCONS_00067030 TCONS_00139138 TCONS_00219110 TCONS_00189178 TCONS_00032866 TCONS_00253648 TCONS_00232810 TCONS_00187311 TCONS_00197959 TCONS_00099649 TCONS_00197502 TCONS_00070832 TCONS_00029961 TCONS_00179385 TCONS_00250433 TCONS_00198856 TCONS_00020727 TCONS_00020118 TCONS_00139133 TCONS_00187671 TCONS_00040676 TCONS_00111243 TCONS_00174046 TCONS_00243312 TCONS_00154276 TCONS_00072626 TCONS_00096681 TCONS_00078522 TCONS_00169278 TCONS_00049620 TCONS_00056972 TCONS_00206548 TCONS_00040374 TCONS_00083376 TCONS_00044803 TCONS_00056666 TCONS_00178327 TCONS_00070115 TCONS_00165087 TCONS_00154456 TCONS_00088346 TCONS_00139140 TCONS_00079056 TCONS_00188448 TCONS_00019107 TCONS_00029761 TCONS_00176171 TCONS_00251060 TCONS_00137316 TCONS_00006522 TCONS_00247350 TCONS_00122302 TCONS_00006772 TCONS_00232255 TCONS_00231796 TCONS_00235438 TCONS_00092010 TCONS_00162507 TCONS_00108256 TCONS_00008734 TCONS_00091823 TCONS_00179444 TCONS_00141391 TCONS_00180081 TCONS_00129756 TCONS_00064321 TCONS_00108035 TCONS_00025135 TCONS_00039827 TCONS_00081014 TCONS_00175103 TCONS_00148962 TCONS_00021829 TCONS_00067031 TCONS_00099433 TCONS_00152030 TCONS_00122054 TCONS_00019021 TCONS_00109954 TCONS_00086569 TCONS_00188029 TCONS_00054167 TCONS_00251933 TCONS_00222321 TCONS_00239619 TCONS_00109902 TCONS_00062813 TCONS_00218275 TCONS_00240553 TCONS_00124533 TCONS_00186091 150 XLOC_101601 XLOC_119403 XLOC_131667 XLOC_084810 XLOC_081985 XLOC_005082 XLOC_128591 XLOC_093627 XLOC_108761 XLOC_104507 XLOC_107140 XLOC_086832 XLOC_013269 XLOC_114963 XLOC_011177 XLOC_064236 XLOC_103183 XLOC_121514 XLOC_139256 XLOC_115211 XLOC_083318 XLOC_070658 XLOC_157826 XLOC_079596 XLOC_059017 XLOC_143249 XLOC_016019 XLOC_139448 XLOC_157820 XLOC_154100 XLOC_044735 XLOC_055275 XLOC_060247 XLOC_002673 XLOC_075997 XLOC_006042 XLOC_094264 XLOC_085810 XLOC_142949 XLOC_066309 XLOC_157253 XLOC_092522 XLOC_048385 XLOC_127403 XLOC_018682 XLOC_063677 XLOC_064582 XLOC_057197 XLOC_063528 XLOC_078403 XLOC_017397 XLOC_041343 XLOC_065698 XLOC_015977 XLOC_134973 XLOC_090033 XLOC_029426 XLOC_118929 XLOC_071034 XLOC_105847 XLOC_117497 XLOC_086945 XLOC_024654 XLOC_151307 XLOC_121424 XLOC_118751 XLOC_110264 XLOC_028222 XLOC_132429 XLOC_115217 XLOC_019102 XLOC_156587 XLOC_142293 XLOC_113359 XLOC_119618 XLOC_059892 XLOC_119163 XLOC_042609 XLOC_016216 XLOC_109158 XLOC_153376 XLOC_120509 XLOC_011402 XLOC_010796 XLOC_113716 XLOC_024492 XLOC_067143 XLOC_149975 XLOC_094036 XLOC_044394 XLOC_058032 XLOC_047410 XLOC_103329 XLOC_029751 XLOC_034775 XLOC_125070 XLOC_024190 XLOC_051245 XLOC_026271 XLOC_034469 XLOC_108100 XLOC_042140 XLOC_100409 XLOC_094216 XLOC_053133 XLOC_047941 XLOC_114491 XLOC_009787 XLOC_105950 XLOC_154003 XLOC_083526 XLOC_002085 XLOC_073857 XLOC_002334 XLOC_141741 XLOC_141284 XLOC_144232 XLOC_056778 XLOC_099388 XLOC_064164 XLOC_004291 XLOC_056594 XLOC_109217 XLOC_085819 XLOC_109851 XLOC_078469 XLOC_039045 XLOC_063945 XLOC_014679 XLOC_023644 XLOC_049896 XLOC_104886 XLOC_090840 XLOC_012502 XLOC_059676 XLOC_092240 XLOC_073610 XLOC_009702 XLOC_065858 XLOC_052184 XLOC_114072 XLOC_031976 XLOC_154874 XLOC_135630 XLOC_146284 XLOC_065806 XLOC_037540 XLOC_147217 XLOC_076079 XLOC_112144 Coding TCONS_00174046 XLOC_104507 Coding Coding ACOT11 3:92272943-92301505 j TSS129250 2521 3 TCONS_00174046_1 173 0.621975406584689 6 0.911942859143587 0.00313852133306947 0.00241231307203616 0.00230883940516261 0.00159272568936213 0.00165674058503331 0.00100103160310711 0.00134173782270352 0.0012934930535564 0.00180587561802444 0.0026758852678101 0.00171937966131285 0.00160249265132579 0.000709789345247976 0.00254066937106549 0.00190086311249893 0.0184614017106363 0.00807425195500976 0.0153722935871053 0.00358905129998192 0.00352117986384747 0.0015838623582098 0.00702937393908806 0.00496394307860696 0.00695674420836092 0.00286775024648844 0.00389072437791536 0.00373749856577436 0.00284008752174211 0.00233302416593925 0.00532492302341169 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 4475 100.00 0.983736612455375 XM_005270732.1 ACOT11 PREDICTED: Homo sapiens acyl-CoA thioesterase 11 (ACOT11), 0.0 774 90.05 0.225704085680286 TCONS_00174046_1 sp|Q8VHQ9|ACO11_MOUSE ACO11_MOUSE Acyl-coenzyme A thioesterase 11; 1e-108 327 92.26 0.965317919075145 1 coding 0 0 0 0 -0.00915018249092775 0.944016596621234 -0.0217543626755451 0.647572856388768 GCCTCAGATTTACAGCATACTTCAGGGCTGAGCCAAACCAGGGCCTGGCCTCCGTGTTCTCCAACCGCACGTCCCGGAAGTCGGCCTCACGCACTGACAGCGACAACATGGCAGATGGCGAGGGCTACCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGTGCTGCCCTGCCACACCAACCAGCGTGGCGAGCTGAGCGTCGGGCAGCTGCTCAAGTGGATCGACGCCACCGCCTGCCTGTCCGCGGAGAGGCATGCAGGGTGCCCCTGTGTCACAGCCTCCATGGATGACATCTATTTTGAGCACACCATTAGTGTTGGACAAGTTGTGAATATCAAGGCCAAGGTGAACCGAGCCTTCAACTCTAGCATGGAGGTGGGCATCCAGGTGGTCTCCGAGGACCTGTGCTCTGAGAAGCAGTGGTGTGTGTGCAAGGCCTTAGCCACCTTCGTGGCCCACAGGGAGCTCTCCAAGGTGAAGCTGAAGCCAACTGTGCCTCGGACCGAAGAGGAAAAGACGGAGCACAGTGTGGCGGCCGAGCGCCGGCGCATGCGACTGGTCTACGCAGACACCATTAAGGACCTCCTCGCCAACTGCGTCATTCAGGATGGTGAGCGTCATGGGTAGGGAGGGCAGCTCGTGTCCTACATGCTCCCCTCTGTCTGGGGCTCCTACTGGGCAGAGAAAGGAAGGAAGTCTCCCTGGAATATCCACCCAGTGATGGCCTCAGGCCTGGATAACACTCTTGCCTCAAGGTCCCTTAGTGGGGAAAAGGGAGCATTTGGACCTCTCGCCCAGCTCCCAGGAGCCATGAAGATGAAGCTGGGACACATAGAAAACAGTTTGTCATCCACTAAATGCATTTGGGTCTCTAGGAGTCAAGGTATTTGGGAAGGTAGTATTGAGCTTGGCCTTGAGGACCCTCAGTTCAGTCGCTCAGTCATGTGCAACTCTTTGCGACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAGCTCCTGGAGTTCACCCAAACTCATGTCCATCGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTTGTTCCCTTCTCCTCCTGCCCCTAATCTCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCCCATGAGATGGCCAAAGTATTAGAGTTTCAGCTTTAGCATCAGTCCTTCCAAAGAACACCCAGGACTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACTACAGTTCAAAAGCATCAATTCTTCGGCACTCAGCCTTCTTCACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCCTTCCAAGGAATAAGCATCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCCAAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCTATGAAGTGATGGGACCAGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTCACCTTCATCAAGAGGCTTTTTAGTTCCTTTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATAGTCCTCCCGGCAATCTTTATTCCAGCTTATGCTTCCTCCAGCCCAGCGTTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAACATACAGCCTTGACGTACTCCTTTTCCTATTTGGAACCAGTCTCTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATATAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGATATTCCCATCTCTTTCAGAATTTTCCACAGTTTCTTGTAATCCACACAGTCAAAGGCTTTGGCATAGTCGAGAAAGCAGAAATAGATGTTTTTCTTGAACTCTCTTGCTTTTTCCATGATCCAGTGGATGTTGGCAATTTCGTCTCTGGTTCCTCTGCCTTTTCTAAAACCAGTTTGAACATCAGGAAGTTCACGGTTCACGTATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCAGTCGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGAAATGAAAACTGACCTTTTCCAGTCCTGTGACTACTGCTGAGTTTTCCAAATGTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCGTCATCTTCTAGGATTTGAAATAGTTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTTGTAGTGATGCTTTCTAAGGCCTACTTGACTTCACATTCCAGGTTGTCTGGCTCTAGGTGAGTGATCACACCATCATGATTATCTTGGTCATGAAGATCTTTTTAGGACTTAAAAAAAAAAAAAAAA EMBV3_20009 GGATTTCTCTGGGAATCTATAGCCATCCAGCCTCCCATTACCCCAAGGTACTCCCACACA Gene GeneID:538825|LCMT2:XM_002696804:554_cdna Constitutive 0 NULL GeneID:538825 21 GENE LCMT2 NULL leucine carboxyl methyltransferase 2 EMBV3_41626 GGAGAGTTGACCATTTTAGGGCACCGTCTATCAGAAAATCTTCCCATCGCTGAAGATGCC Gene GeneID:100337026|LOC100337026:XM_002686920:160_cdna Constitutive 0 NULL GeneID:100337026 4 GENE LOC100337026 NULL D-dopachrome decarboxylase-like EMBV3_28568 CTTCAGAGCCCCTTCCTGAGAAGATCCCAGGCCACGGCCAGGCTCGACGCTCCTGGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17248 CAACAAGAGGCAGATGACCACTGAAGAGGGCAAGCAGCACGCCGAAGAACTGAGTACCAT Gene GeneID:100296242|LOC100296242:XM_002687706:125_cdna Constitutive 0 NULL GeneID:100296242 5 GENE LOC100296242 NULL similar to Rab-protein 6 EMBV3_28309 GCTAAAACTCCCTCCAGTGAATCTTCCACAATCTCTCCTTCTAAACACCTTCACTGTCCC Gene BVV0101_044046 - 1 EMBV3_00785 GK000018.2:39486289-39498923 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12998 TGGCAAGCGGCTGAGCAAACCCAGGCCTTCATTTCCTCCAGCTCCCCAGAGAGCAATCTT Gene GeneID:613954|RAB37:XM_002696189:193_cdna Constitutive 0 NULL GeneID:613954 19 GENE RAB37 NULL RAB37, member RAS oncogene family EMBV3_03017 GAGGTAAAAATAGCTGTGGTATTTTGCCATTTTTCCTGTCAGGTATTTTAAGACAGGATC Gene GeneID:512259|HPGD:NM_001034419:29_cdna Constitutive 4 NULL GeneID:512259 8 GENE HPGD MGC127443 PGDH hydroxyprostaglandin dehydrogenase 15-(NAD) EMBV3_43645 GGCTGATCCCCAACCTGACAAACTCTTGGTAGGTTTATGCGGTGAGCAAGTCACAGGAAA Gene GeneID:533605|IL17RB:NM_001083467:229_cdna Constitutive 2 NULL GeneID:533605 22 GENE IL17RB MGC148783 interleukin 17 receptor B EMBV3_40277 AGAAGACTATGAGAGCGATGGGACATAGAAAGCAGCCTGCCCATGAGACTGTTAACTGAC Gene GeneID:513600|RAD17:NM_001103244:81_cdna Constitutive 0 NULL GeneID:513600 20 GENE RAD17 MGC140462 RAD17 homolog (S. pombe) EMBV3_37668 CTGTGAAGAGGGGAGAAAAAAGGAGGGGCTTGACAGGGAGAGTTTAGGACCCGGAATAAA Gene BVT0102_415911 + 0 NULL GK000004.2:87503584-87522148 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32626 TGAAAAGTGTCAGTGGCTTTGTCTTCAATGGGGGTCTGATGTGGTGTCGCCCCAGGAGCA Gene GeneID:512355|TRAF2:XM_002691706:66_cdna Constitutive 0 NULL GeneID:512355 11 GENE TRAF2 TANK similar to TNF receptor-associated factor 2 EMBV3_42941 AGCAGCAGCTCCGTATTTTCCTCTAGCCTTCGCCCCTGGAAGAAAAGCACTGGAATGGAG Gene BVV0102_018734 + 1 EMBV3_33944 GK000009.2:71913827-71927083 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35837 TCAAGCCGGATTCATCAAGTGGCCAACGAGGAGGCTTAACGGGTGAAGTTACCTTTTTCT Gene GeneID:513665|STK17A:NM_001083422:34_cdna Constitutive 0 NULL GeneID:513665 4 GENE STK17A MGC140096 serine/threonine kinase 17a EMBV3_03401 TCTACCCAGCTACCACTGGCAGGAACTTTGATGAGCCAGAGGATGCCAGCTGTCCATCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23917 CCTCGCGACTCCCCACTGCCCCGTGGCCAGGCGGCCAACATGTCCGGGACGTTTGGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42976 AAGCTTTGGGCAAGTATGGCCCTGCTAATGTGGAAGACACCGCAGAAAGTGGAGCTACAG Gene GeneID:785416|LOC785416:XR_083800:335_cdna Constitutive 0 NULL GeneID:785416 11 PSEUDO LOC785416 NULL similar to eukaryotic translation elongation factor 1 beta 2 EMBV3_40468 CTGGTGAGGTGTGAATAGACGCTGTCTGGCAATCAACACCGAAAGCCTTAAACGTTGCCT Gene BVT0102_027672 - 1 EMBV3_23668 GK000024.2:22089005-22094897 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06400 GGGTCAGAAATTAACTGCCTTTCTTTGATGGCTTGTCCAACTAATTCCATCAGTAGCAGG Gene GeneID:613655|FBXO47:NM_001083759:165_cdna UTR3_Alt 2 NULL GeneID:613655 19 GENE FBXO47 MGC155051 F-box protein 47 EMBV3_05291 TGCATTCTTTGGTGATCATGAGGCAGAGAGTATGTGCTGTGTTGCTAGTGGTGTCCTGGG Gene GeneID:789201|LOC789201:XM_002693601:95_cdna Constitutive 0 NULL GeneID:789201 15 GENE LOC789201 NULL similar to olfactory receptor, family 4, subfamily A, member 47 EMBV3_09614 AAATCTCTCCAAACCCTGACCTCACCCCCAACCTCAGCAAGCATCACCTCAAACGTCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12651 AAGCAACCGGAGACGACGACAAGGAGAACCAAGTCCACGGCGAGCTGCCTGTAGAGAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40675 AAGGCGTGCTGGCCACCTGCTACAACAAGACGTCGCCTGGGAGCCCGCGGGAGACGGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03572 GCCCTCTATCTGGGCTCTCTGATCAAAGAGGTTGGGAAGCTGGTTAAGGAGGCGGCCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11135 GAGGTATATGAAATTGAGATGGAGAACAGTGAGCTTTCGGGTGACCCCGATTCCCAGCAG Gene GeneID:785805|LOC785805:XR_084628:1_cdna Constitutive 0 NULL GeneID:785805 1 PSEUDO LOC785805 NULL similar to collagen, type XXIX, alpha 1 EMBV3_08919 TGATGACACGGCCGCAAACTGCATATACCTGAATATCCCCAGCAAAGGCCACGTCTTGCT Gene GeneID:537391|DDAH1:NM_001102201:77_cdna UTR3_Alt 2 NULL GeneID:537391 3 GENE DDAH1 MGC165853 dimethylarginine dimethylaminohydrolase 1 EMBV3_14133 GGATCTATCAGGAAAGAAGACTAAAAGGCCTGTGATAAGCCAGCCACACAGGGCATCCTC Gene GeneID:505831|CCDC34:XM_002693510:216_cdna Constitutive 1 NULL GeneID:505831 15 GENE CCDC34 NULL coiled-coil domain containing 34 EMBV3_15103 TGTAGGGACAGTTCTGCCGCTCTCATTAATGTGCAAGTCCTTCTGGTAAAGAGCAATAGC Gene GeneID:538583|ENPP4:NM_001081535:320_cdna UTR3_Alt 2 NULL GeneID:538583 23 GENE ENPP4 MGC152041 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) EMBV3_17878 GCCTATCCCCATCTCCGCATCAGGTCCAAGACGAATAAAGAGAACCTGGACCACCACCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07941 CAGACCTCATAGATGTTGATCTTGTAAGAGCCCACATAGCATACCTCTGACGGAAGTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30577 ATCCTAGAGTCCTTCAGGAAACTCTCGCTCACCCCAAAGTCAGGTCTTCCAGGGAACTCA Gene GeneID:511422|COL6A1:NM_001143865:30_cdna Constitutive 0 NULL GeneID:511422 1 GENE COL6A1 NULL collagen, type VI, alpha 1 EMBV3_40575 ATGAAAGTGAAAGTCAGACATGTCTGACACTTTGGGACCCTGTGGACTGTATAGTACTGG Gene BVV0102_102389 + 1 EMBV3_43656 GK000009.2:42417662-42435612 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10515 AACACCACCTGAAAAATATGATGAGGACGGTATGGACTGCATGGACAATGAGAGGCGGCC Gene GeneID:100137872|AKT3:XM_002693954:132_cdna Constitutive 1 NULL GeneID:100137872 16 GENE AKT3 NULL v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) EMBV3_30258 GTTCCTGGGAGCAGTGTATGTTACTTCACATAGCAGCAATTCCTGTCACATGTTCATGTC Gene GeneID:783375|ACBD3:XM_002694001:302_cdna UTR3_Alt 2 NULL GeneID:783375 16 GENE ACBD3 NULL acyl-Coenzyme A binding domain containing 3 EMBV3_14187 CCACCTGCTCATTACCAACAGCATCAAGAATGACCTGAGCCAGGGGATTGAGGCTGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16881 GTCAGTGTGATTCTTGCTGCTCTTCCTTTTCGTGAACAGTGGATGTGGGACAGTATTTTC Gene GeneID:539881|KCTD8:XM_002688234:32_cdna Constitutive 2 NULL GeneID:539881 6 GENE KCTD8 NULL potassium channel tetramerisation domain containing 8 EMBV3_07970 AGGAGTAGCTCTTGGAGCCGCTGCGGCCAGATCTTGAGTGAATGCTATGTGTTGGTGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17991 GGCGCTGTCTCTCAGGGTCCCCACCCTCAGGGGAACTTTTGGAAGAGTCCCAGATGGAAG Variant GeneID:526103|TNIP1:NM_001024554:61_cdna 153^324 1 EMBV3_32892 GeneID:526103 7 GENE TNIP1 MGC128140 TNFAIP3 interacting protein 1 EMBV3_27435 TAAATGGGCTTTTTCAACGTGATTGAGCAGGTTGTTCCTGTGTGCAGTGGAGAGTCCCGG Gene BVT0101_025886 - 0 NULL GK000022.2:51891302-51898003 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129048 1 XLOC_078009 NonCoding TCONS_00129048 XLOC_078009 NonCoding NonCoding - 22:51896154-51897607 - TSS96078 568 1 TCONS_00129048_1 63 0.184859154929577 2 0.610192837465565 0 0.00068994441483706 0 1.46199741891588e-05 0 0 4.10683678694317e-05 0 0 0 0 0 0 4.14084232360787e-05 0 0 0 0 0 0.000240557956251579 0 0 0 0 0.000914851351082887 0 0.000247570270776842 0 0 0 NM_138768.2 MYEOV Homo sapiens myeloma overexpressed (MYEOV), mRNA. 2e-06 57.2 92.31 0.0669014084507042 0 noncoding 0 0 0 0 0.00073606282106101 0.995585629835806 0.0214984300263 0.807802877908714 CGTTCTGCGTGACCTCAGGACCCTCAGAAGGGGTTTGCATGGGTTGGGGCAGGTCTCCGTGACCCCCAGAACTTGGTCAGGAACAACCTGAAGGCCCCTGCGTGACTGGTCACCTGCCCACTGGCACAGTTGTCAACTCTCCTGCTGGCCTTGCACCCCGACCCTCCGAGTCCCGGGACTCTCCACTGCACACAGGAACAACCTGCTCAATCACGTTGAAAAAGCCCATTTATCTCATGGACGGGGACACAGAACAAATCTCAAAACTGACCGTGTTTCCCTCTTTGCTTTAGCTGCTGGGGAGCTCGGGGTAAACCCCAGCCCACCTGGAGCAGCCTCCCTCTTCAGTGTCCACCGGCCACCTCCCTCCCTGCCTCATGCCCAGCAGCTGGCACACCCACGGGCAGGTCCTGATGAGCAGCATGCCCCTGGTGACCTCCTACCCACTTCCTACTTCTCCAAAGCCACTCATGCTGTTCCTGACACAGCCCTCCTGTTTGTCTCCTGGCCACTACAAAGGCCATTCTGGGGCCACGCTAGCCTCAGAGACCTTGTCACCACACACCCA TCONS_00127304 r 5' 1553 TCONS_00127304 r 5' 333 EMBV3_39188 ACACTATCAAGAGCTGCCCTGACGGATTCGCATTCTTGGGCAAGTCACCAGGCCTCATTT Gene GeneID:520788|CATSPER4:XM_002685765:561_cdna Constitutive 0 NULL GeneID:520788 2 GENE CATSPER4 NULL cation channel, sperm associated 4 EMBV3_37983 TGAGGAAGCTCTGATTTCTGTGGACCTAGCCCATATCACACTGGCTTTGTCTTGCCCAAG Gene BVV0102_201549 + 0 NULL GK000012.2:22006593-22718819 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034857 TCONS_00034859 TCONS_00034839 TCONS_00034858 TCONS_00034860 1 XLOC_020763 Coding TCONS_00034839 XLOC_020763 Coding Coding FOXO1 12:21733909-22009079 j TSS25638 4842 1 TCONS_00034839_2 417 0.046881453944651 3 0.982414443487457 0.00668202777556037 0.00414523828446224 0.00591834187216149 0.00665172910458944 0.00831733917185716 0.00228454004092568 0.00397277289311038 0.0059929124793238 0.00852978649183087 0.00258000932082998 0.000736661602127364 0.00119177276757082 0.00139869915784909 0.00482179480144906 0.00258059106739665 0.0023118742809467 0.000338170354094918 0.00111885325560542 0.00860316937330931 0.0114975352237167 0.00457114569306769 0.000466844425507427 0.000430644476784293 0.000610672904310385 0.0180641267569147 0.019024319775089 0.00878703669360573 0.000143680154402228 0.000257411133487092 0.00118907369591376 XM_002691748.3 FOXO1 PREDICTED: Bos taurus forkhead box O1 (FOXO1), mRNA. 0.0 8313 100.00 0.951672862453532 NM_002015.3 FOXO1 Homo sapiens forkhead box O1 (FOXO1), mRNA. 0.0 4066 81.24 0.88517141676993 TCONS_00034839_2 sp|E1BPQ1|FOXO1_BOVIN FOXO1_BOVIN Forkhead box protein O1; 0.0 857 100.00 0.997601918465228 0 coding 0 0 0 0 -1.49392923696353 0.00457434323309296 -0.170507536934098 0.0284636851437484 GGGCATGCTCCGTGACCTTTTGACTTCAGAGGGCTGAACACTCCATCCGCAGAGCATGTTCTGAGTATACCTATTGTGAAGAAGCCTGTAGCTTAGTTCTGTCTAGGCCAGAATGAAGGTCACCTCATATTTTATTGTCTCCAATTAGCTTCAGTTTTATCCCAAAGAATACCTCCAGCCCCTCGCCTTTGAGGAAGTGGATTTGAGACTTCATCTTCTCGCTCGGCCACCTTAATTCAATTCGTCATAATCTGTCCCTGCACAGCAAGTTCATCCGCGTGCAGAATGAAGGAACTGGAAAAAGCTCCTGGTGGATGCTCAATCCAGAGGGAGGCAAGAGTGGGAAATCCCCCAGGAGAAGAGCCGCATCCATGGACAACAACAGTAAATTTGCTAAGAGCCGAGGCCGAGCTGCCAAGAAAAAAGCATCCCTGCAGTCGGGCCAGGAGGGTGCCGGGGACAGCCCGGGATCGCAGTTTTCCAAGTGGCCCGCAAGTCCCGGCTCCCACAGCAATGACGACTTCGACAACTGGAGTACCTTTCGCCCTCGAACCAGCTCGAACGCTAGTACCATTAGCGGGAGGCTCTCTCCCATCATGACGGAGCAGGACGACCTGGGAGACGGGGACGTGCACTCAATGGTGTACCCGCCGTCCGCCGCAAAGATGGCTTCTACTCTGCCCAGTCTGTCCGAGATCAGTAACCCTGAGAACATGGAGAACCTTTTGGATAATCTCAACCTTCTCTCGTCACCAACGTCATTGACTGTGTCCACCCAGTCTTCCCCAGGCACCATGATGCAGCAGACGCCCTGCTACTCCTTTGCACCGCCCAACACCAGTCTGAATTCACCCACCCCCAACTACCAAAAATATACATACGGCCAGTCCAGCATGAGCCCCCTGCCTCAGATGCCCATGCAGACGCTGCAGGACAACAAATCGAGTTATGGAGGCATGAGCCAGTACTGTGCGCCGGGACTCCTGAAGGAGCTGCTGACGTCTGACTCTCCTCCGCACAACGACATCATGACGCCAGTCGATCCGGGGGTGGCTCAAGCCAACAGCCGAGTGCTTGGCCAGAGCGTGTTGATGGGCCCCAATTCGGTCATGCCGGCCTACGGCGGCCAGGCCTCTCACAACAAAATGATGACCCCCAGCTCCCACACCCACCCCGGACACGCTCAGTCGACATCCGCAGTCAACGGGCGTGCCTTGCCCCACGCGGTAAACACCATGCCCCACACCTCGGGTATGAACCGCCTGGCCCCGGTGAAGACAGCTTTACAAGTGCCTCTGGCCCACCCCATGCAGATGAGCGCCCTGGGGGGCTACTCCTCTGTGAGCAGCTGCAATGGCTACGGCCGGATGGGCGTTCTCCACCAGGAGAAGCTCCCCAGTGACTTGGACGGCATGTTTATCGAGCGCTTGGACTGTGACATGGAGTCCATCATTCGGAACGACCTCATGGACGGAGACACGTTGGATTTTAACTTTGACAACGTTTTGCCCAACCAAAGCTTCCCACACAGTGTCAAGACAACAACACACAGCTGGGTGTCAGGCTGAGAGTGAGCAAGCGAGCAAGCAGGCTACACTTAAAAGTACTTCAGATTGTCTGACAGCAGGAACTGAGAGAAGCAGTCCAAAGATGTCCTTCACCCTACCTTTTCGTTTTCTTGATTTAAAAAAAAAAACACACACAAAACGCATTTCTTTTTTCCTTTCGTCAGACTTGGCAGCGAAGACGCTTCCTGTACAGGATGTTTGCCCAGTGTTTGCAGGTTATGTGCTGCTGCAGATAAGGACTGTGCCATTGGAAATTCATTACAATGAAGTGCCAAACTCACTACACCATATAATTGCAGAAAAGACTTTTGGATCCTGGTGTGCTTTCAACTTTTGTACATAAGCCGTAGCTACAGAATTGTATCTGTGTGCTTTTTTTTTTTTTTTTTTTAATATTCATTTTGGTCCAAGGAAAGTTTATACTCTTTTTGTAATACTGTGATGGTCTCATGTCCTTGGTAAGTTAAACTTTGGTTTTGTACTACCTGTGTTCTGCTGAACTGATGAATCACAGAGAACCAAGCTCTCCGTTCTACAGCTCCACTGGACAGCTCTGCATCTGTTCATGGCACCGCATAATTCACAGGAGAACCAGTAGCCTGTTGTCCATCTGCTGAATTAACGGACTTATCAAAACTGTTTTGGGGGGAAAAAAAAGATTAAACTCCAGCCTTGTACAGGTCTTTTCTATTTTTTTTTTCTTCTTCGTTTGTTTATTTTGTTATTTGCAAATTTGTACAAACACTTTAAATGGTTCTAATTTCCATATAAATGATTTTTGATGTTACTGTTGGGACTTGAGATCATTTTTGGAATAGATACTGAACTGTAATGTTTTCTTAAAACTCGAGTCTACCTTTGTTACATAGTCTGCTTGTAAATTTGTGGAATCCCAGACATTTGAAGCAGCATTCGTGATTTTCCTTTTGTATTTCTAACTGGATTAGTACTAATTTTATACATGCTTCACTGGTTTGTATACTTGGGGATGCTCCTTGGTGACGTTTTCTGACTAATCTTAAAATCCTTGTAATTAGTACTTGCACACCCAACATTTCTGGCCCTACCTTGGCACGAGAGTGATGTATAGTTACGGACATTTTGCGTTTCACGTTGAGAACTTGATTTGTTTTTGTGTATGTGTTTTACAGAAATCCCATCTGCTTCTGCTGTCCTTGTGAACTAGGCATCCCTGCCCGGCATTGAATCTTCTGATCAGTACCTGTATGTGCTTTGTTTCAAGTACTCCTGGGGGGAGGCTGTGTAGTATTTGGAGATCAGAAGGGGAGACCCACCTCCAAAACAGTGCTCCTTTCTCAAGCTGGGGTTTTGATCAACTTAACCTTTTTGAGTTGAACTTCAGCAAAAGTTTTGCCTCGTAACGCTGTGCTCTTCCTGGTCCAGGCGGGTGTTGGCTTTGTACTTCTGGAGAATTGTGTCCATACTCACTCTTAAACCCCCTTCCCCTTCTGTCCTGCACATTACTTGGTGCACTGTGGAAAGTGAGGTTGAACGGGGGAATTTTTAAATTGAGTGATTTTTAAAGTGCTTGGTGTTCATGATTGCAGATGGCTACCAAAGAGACTAGCACTTGCTTAAAAATTCGGGCACTAAATTTAAAAACCGACAAGCCAGCAGTAAGTTATACCTTTGAATCTATTTAGAAAGCCATTGCATTAAGAATTGGAGAGTTTCTTTCCCCTTTAGCAACCCAAACTATAATTATGGTCATTATGTTGTAATATTTTCCAGTTACCTATAACTGATTAGACCCAAGTTAACTGGCTTTGCATCCCATTTAGTCCATCAGTGTTTTCAAGTCGTGCGGAATGCCCAGAGTCAGCACAAGGAAAGGAACAGGTGCGCAAAAGTGTTCCTCTGGCCTTCTTGAGGAAGCTCTGATTTCTGTGGACCTAGCCCACATCACACTGGCTTTGTCTTGCCCAAGAATTGCATCTCTCCTGGCTTGGTTTTTTCTCCAAGTTTAACAAGAACACAAGTTTTCTGGATGGATTTCCTCCAGGAGGCAGGCTGTATTGTTTACTTTCCACAGTGACTTCTACACTTTTGAAAATTCATTAAACAGCCACCCCTCTAACCATCTTCATTGTTGGCCACTCCAAAATAAGTCTGGTTTCAGAAACCCTGGTTCCTCTGACCGGTGCCCCCTGTACCTGCGCTCGGACTCATTGGGGCCACAGTTCTTGTGTTCCCCTCTGTGACCACCACTTCGTGCCCCCCAGGCCAGCACACACTGAGCCTCATCAGGCCCATTGTTCACTGATGAGGCAACTAGCTACAAAAGAAAAAAAAAAAATCACTGTTCAAATCTTACTACTTCATAGAGTGACTTTTAAAAAGATGTTGCTTCCTCTTGAGTCTGTGTAAATATCTTTTTTTTTTTTTCCCTTCAAATTTTGTGTGTGTGTGTTAAAATTCTAACAGGAATCCTGGGTAGCTCTCCAGGGTACAGTGAAGTTCAGTGAAAGGCACCTTGTCGGTTTTGAAAACAAACATTATGTGACCTCTGGTAATTCTTTTTCTGTACGAATACTGACTTTCTGGAGTAATGAGTATATCAGTTATTGTACATGATTGCTTTGTGAAATGTGCAAATGATATCACCTATGCAGCCTTGTTTGATTTATTTCCTCTGGTTTGTACTGTTATTAAAAGCATATTGTATTATAGAGCTATTCAGATATTTTAAATATAAAGTATTGTTTCCGTAATATAGACGTATGGAGTATATTTAGGTGATCGATGTGTTACTTGGAAAGGTCTGCTTTGAAAAACTGACAAAGTCTAAATTAAAATCCCAGTGAGCAGTAAATCAATGGAAGGTCCCAAGAAGGAGGAGAAAGACACTCAAAATGGAAACAGTTCCCCCAAAGTATATGATTTGGACTTAATTCAGCTGCTGGATAAGTGTTACCAATCTCCCCACCCCCACCCCTCTCCCCAGCTGAATGATTACCGAGTAATCGTTCAGTAAAAGACGCAGTGTGGCTTATGTAGACAGAACAGCCTAGCATTACTGTCGGCCTCCTCCCTGAGGGGGGTGACAGCCTGGCGGCCTGGCCACGTTCATCCCATCCAGACGCAGACAGACCCCGCCCCCTTGGCCAGTCGAGTTGAGTACCCGTGCAGATCCTGCGTTCCCGCTCCAATACAATGAAAAGTGCCTGATGATGCTGATGTACTTACAGACACAAGAACAATCTTTGCTATTATTGTATAAAGCCATAAATGTACATAAATCATGTTTAAATGG EMBV3_16401 CACGCTCGCCGCCTCTGCCAGCACGACAGATTCATCCATGAGCTCGGATTTCCCACATTA Variant GeneID:767991|RNF24:NM_001077052:1372_cdna 70^220 1 EMBV3_06167 GeneID:767991 13 GENE RNF24 MGC134203 ring finger protein 24 EMBV3_00918 TCGCGAGGAGGGTCTGGAACCCGCCGTGTGACAAGTGCATTTATACTTTTGTACGTCTCT Gene BVT0102_073878 + 0 NULL GK000007.2:22680623-22684431 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212506 TCONS_00212500 TCONS_00212502 TCONS_00212504 TCONS_00212503 TCONS_00212501 1 XLOC_130206 Coding TCONS_00212501 XLOC_130206 Coding Coding LOC510442 7:22629668-22684525 j TSS159450 6029 1 TCONS_00212501_3 966 26 0.890568032667347 5.25383230764294e-07 0.000230922880448442 0.000584397541929087 0.000291408770525023 0.000106379137789157 1.03290672920998e-21 1.86956484158615e-05 8.62230908954291e-05 2.13047402605031e-25 0.000129826642050357 3.57552733516649e-05 2.7362104384134e-18 0.000323591440718031 0.000649866273450605 0.000116503199893502 0.000167852257220704 5.98550100801313e-21 0.000653013455340859 0.000463974188931216 0.000172494682778867 1.26939396760632e-17 2.85219310074708e-05 7.0429919494392e-05 0.000535882394156142 9.50817388236428e-05 0.000189889640898428 6.55363830053528e-05 0.000257478409358844 0.000231278111150676 4.91655736100948e-06 XM_003582398.2 DOT1L PREDICTED: Bos taurus DOT1-like histone H3K79 methyltransferase (DOT1L), mRNA. 0.0 5093 100.00 0.468236855199867 XM_005259659.1 DOT1L PREDICTED: Homo sapiens DOT1-like histone H3K79 methyltransferase (DOT1L), transcript variant X1, mRNA. 0.0 3306 86.17 0.461602255763808 TCONS_00212501_3 sp|Q8TEK3|DOT1L_HUMAN DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 specific; 0.0 1650 87.35 0.96583850931677 1 coding 0 0 0 0 0.0151420388568074 0.934870991678211 -0.0152648037157312 0.762313473200887 GTGCGGCGGCCGCGCGCGCCGACATGGGGGAGAAGCTGGAGCTGAGGCTCAAGTCGCCCGTGGGGGCCGAGCCCGCCGTCTACCCGTGGCCGCTGCCGGTCTACGACAAACACCACGATGCTGCTCATGAAATCATCGAGACCATCAGATGGGTCTGTGAAGAAATCCCGGATCTCAAGCTTGCTATGGAGAATTACGTTTTAATTGACTACGATACCAAAAGCTTTGAGAGTATGCAGAGGCTCTGTGACAAGTACAACCGGGCCATCGACAGCATCCACCAGCTGTGGAAGGGCACCACACAGCCCATGAAGCTGAACACACGGCCATCCACGGGGCTCCTGCGGCACATCCTGCAGCAGGTCTACAACCACTCAGTGACCGACCCTGAGAAGCTCAACAACTACGAGCCCTTCTCCCCAGAGGTGTATGGGGAGACCTCCTTCGACCTGGTCGCCCAGATGATCGATGAGATCAAGATGACCGAAGATGACCTGTTCGTGGACCTGGGCAGTGGAGTGGGCCAGGTTGTGCTGCAGGTTGCCGCGGCCACCAACTGCAAACATCACTACGGTGTAGAGAAAGCTGACATCCCAGCCAAGTACGCGGAGACCATGGACCGAGAGTTCAGGAAGTGGATGAAATGGTATGGAAAAAAGCATGCAGAATACACACTGGAGAGGGGGGACTTCCTCTCGGAGGAGTGGAGAGAACGGATTGCTAACACAAGTGTTGTATTTGTGAATAACTTTGCCTTTGGTCCTGAGGTGGATCACCAGCTGAAGGAGCGGTTTGCAAACATGAAGGAAGGTGGCAGAATCGTGTCCTCGAAGCCCTTTGCGCCTCTGAACTTCAGAATAAACAGTAGAAACTTGAGTGACATCGGCACCATCATGCGCGTCGTGGAGCTGTCGCCGCTAAAAGGCTCGGTGTCATGGACGGGGAAGCCAGTCTCCTACTACCTGCACACCATCGACCGCACCATACTTGAAAACTATTTTTCTAGTCTAAAAAATCCAAAACTCAGGGAGGAACAAGAGGCAGCTCGGCGCCGGCAGCAGCGGGAGAACAAGAGCAACACAACCACGCCCACCAAGGTGCCCGAGAGCAAGGCAGCTGTGCCGGCGGACACCCCCGTGGACTCTGGTGCTGAGGAGGAGAAAGCCGGGACGGCCACTGTCAAGAAGCCATCTCCCTCCAAGGCCCGGAAGAAGAAGCTGAACAAGAAGGGCCGGAAGATGGTGGGTCGGAAGCGTGGGCGCCCCAAGAAGATGAGTGCCACCAACCCCGAGCGCAAGCCCAAGAAGACCCAGAGCTCACTGGACCTGCTGCACGCCCAGACCGCGTCACGAGCGGCCTCCCCCTTGCCGCAGGACGCGCACAGGCCACCTCACAGCCCATTCTACCAGCTACCTCCCAGCGTGCAGCGGCCTACCCCCGAGCAGCTGCTGCTGGCACCCACCCCGCCCGCACTGCACAGGCTGCTAGAGTCCTTCAGGATTCAGTACCTACAGTTCCTGGCATACACGAAGACCCCTCAGTACAAGGCCAGCCTGCAGCAGCTCCTGGACCAGGAGAAGGAGAAGAATGCCCGGTTGCTAGGCGCAGCGCAGCAGCTATTTGGCCACTGCCAAGCTCAGAAGGAGGAGATCAAGAGGCTCTTCCAGCAGAAACTGGACGAGCTGGGAGTGAAGGCGCTGACCTACAACGACCTGATCCAAGCGCAGAAGGAGATCTCGGCTCACAACCAGCAGTTGAGGGAGCAGACGGAGCAGCTGGAGAAGGGCAACTGGGAGCTGAGGAGCCAGAGCCTGAGGCTGCTCAAGGCACGATGCGAGGAGCTGAAGCTGGACTGGTCCACGCTGTCGCTGGAGAATCTGCTGAAGGAGAAGCAGGCCCTGAAGAGCCAGATCTCAGAGAAGCAGAGGCACTGCCTGGAGCTGCAGATCAGCATCGTGGAGCTGGAGAAGAGCCAGCGGCAGCAGGAGTTGCTGCAGCTCAAGTCCTGCGTGCCGCCTGATGAGGCACTGGCTCTGCAGCTTCGTGGGAAGCCAGAGGCTGAGCCTAGCCGGCTGCACTTGGAGCTGGACTGCGCCCGCTTCTCCCTGCCACCCTTCAGCAGCTTGAGCCCCGAGCTCTCTATGAATGGCCACGCAGCCGGCTATGAGCTCTGCAGCGCACTGGGTCGGCCCTCGCCCAAGCAGAACACCCCCCAGTACCTGGCCTCCCCGCTAGACCAGGAGGTCGTGCCCTGCACCCCTAGCCACAGCGGCCGGCCACGGCTAGAGAAGCTGTCCAGCCTGGCCCTGCCTGACTACACCAGGCTATCCCCTGCCAAGCTGGTGCTGCGGCGCCACCTGAGCCAGGACCACGCGGCCAGTGGCAAGGCAGCTGCCAGTGAGCTGCACCCACGAGCCGAGCATGCCAAGGAGAATGGGCTCCCTTACCAGAGCCCTGGCATCACTAATGGCATCAAGCTGAGCCCACAAGACCCCCGACCTTCATCCCCCACGGCTTTACAGATGGGAGAGAAGGGCCCCGAGAAGGGTGTGAAGGAGCGTGCCTACGCCAGCAGTGGGGAGGCCATCACCAGCCTGCCCGTCAGCATCCCGCTGAGCACCGTGCAGCCCAGCAAGCTGCCCGTCAGCATCCCCCTGGCCAGCGTGGTGCTGCCCAGCCGCGCCGAGAAGGCGAGAAGCACACCCAGCCCTGGGCCACCGGCCCGAGAGTCCTCATCCACGCTGGAGAAGCAGGTGGCTGCTAACACCCATGGTGCCGGGGGCAACGCTGCTGGGAGCAAGAGCCTCGCCCTGGCTCCCACAGGACAACGACCAACCACCCGTGCTCAAGAAGGAGAAGCCCCTGAGCCAGACCAATGGTGCCCACTACTCCCCACTGACTTCGGACGAGGAACCAGGCTCTGAGGATGAGCCCGGCAGTGCCAGAATTGAGAGAAAAATTGCAACGATCTCCTTAGAAAGCAAGTCTCCGCCAAAAACCTTGGAAAATGGTAACTAGGATTTCTACCTCAACCGCGAGACTATGCAAGGGTGGGCTGGGCCGGCGGCGCGGGGCCCCCCATGGGACGGCGAGGACGGACGAGGCCGGAGAACAGGCTCTACTGTGAATCAGCGCCGCGCAGACCTGCGGAGACGGCTCGCTGGGGCCCAGCTCCAGCCTGTACTGTCCATAGTTTTAGATAAAGTATTTATCATTTTTTAAAAAGTATAAACAACTTTGACTTATTTTATTCCACCGAAGCCGTAAAGGCAACCTATTGAGAGATGTAGATACTATATGTGAAAGGATCTATGTAAAAGACGTCCATCCGCCCGAGGACTGGCCACCGCAGGGACCGCCAGCCGCCCGGTGCTATCTCGTCGCAGGCCGGCCTCCACGCTCTTGGTGCTGACTCTCGGGGTTGACCAACGCCGACGCCAGGCCCGGTGCCTGCCCTGTTTATCTAACGCTCTTCCTATACCAAAGGCCCCAGCTCCGAGTGGAGGCCCGCCCGCCTCGCACTGTGAACGGCCTCGCTCGGCCCCTGGGTCCGCATCACGCCTTTGGCATAGGAATGGTGGCAGCGTGGCCAGGCTGCAGCAGGGTGCCTCGAGGAGGAGGGGACCTGTTTGAGTGGTGCTCGCGAGGAGGGTCTGGAACCCGCCGTGTGACAAGTGCATTTATACTTTTGTACGTCTCTGCTCGTCCGGGCCCGCACCACGGCTGCCCAGGGAGGGTCAGCGCCAGTGGTGGCTGGGGACGCGGGTGGTTAGTCGTGGGTGCCTGGTGTGTCTACAGGGGAGTCACGCTGACGGGTGACAGTATTTTATAGAGATGTGATGAAAATTTATAAATTTCATAGACTTGACTTCATTTATTTTTAGACTGTATGATGAATACACAGTAAACTAAAGAGAAAAAGGAAGAAAGAAAAGTGAGGGGAAACCTTGCTGTTTATTCAAGTGCACAGAGGTGCTGGCCCAGGGCCCACCCACCCACCACCCACCACCCCCCACCCCCCACCCCACAGCTGGAGTGACACTCTCCCCCCGCCCCCTGCAGCCACATCCCTCCACGCGGGAGGGATGTGGTGGGGTGGCAGGGCAGGAGGGCTGGTCCCTGAGGCTCCGAGGTGGTGGGTGGGGTTCTCTGTCAGCCGCACAGCATCTGTGACTATGCTGGGTCCTTGGTGCAGCGGTGTTGTCTGTGTGCCTCCCTGGAAGGGCCAACGTTGGCCAAAGGTGCTGGCAGGGGGCCCAGACCCCAAGGTGGACACCCAGCCAAAGGCTAGGTGTGGGCAGTCAGAGCCCTGTCCTCAGGTGCTCACCACCCCCCACCAAGTGGCACCCACCAAGGAGCGCAGGAGGTGGGCCTCCATGTAGGGATCTAACCTGAGCCTTCCCCAGCCTGGCCAACACCACCCACCCCTGCAGAGTGGGGCCCTCTGCTGCCCCGAGGATCAGTATGGTAGCCGAGCCCCAGCCCGCCGCCTCATTCCTGGGGTGGGCCTGGAGCCAGCCTTTCTGGCAGGTGGAGGCCACAGTGTCAGAGCAGGACAGTGTCCCACCTCTGGCCACCTCTACACTGCTCAGAGCAGCAGTTGAAGCTGGAGATGGAGCCCTTCTCCTGTGACAAGCCCTACCCCGTCCCCTCCACCCCAGGTCGGTGCTCCTGGTGGGTGTGTGATGGTGCTGTCCTACCCCCTGCCCCCACCCCTCTTCAAGAGGCTCCCCACCCCCAACAGAAAGCTGCAGGGCTGCCTGAGGAGCCCCATCTGAACAAATGACACTGTACACAAACACTGCATGGCTTGTGGCCCACTGTGCCTTGTCTGCCCTCCAAGCTACAGGGACAGACACGTGCACAGGGCCTGCCCCACAGTGGGGCCAGTTTGGCCTCTCCACACCCACCATCCGGCCCCAGCCCCTCGCCTTGGCCTGGGTGCCGCTGCCACAGGAAGGAGGGGGCACCAGGGTATTGGGCGTGGGGGGGAGCCCCGCTGCTGCTGTTGACCCGGGTGCTCCACTCCACTCCAGAAGTCCGATGGCTACGGTCGCTTTGCTCAGGAAACCCTAACAATGAAGACACCCTCTGGTCAGGGGACACAGCCCTCCATTTAGCTACAAGTCAAATGGTGACCTATTTAAGATTCCCCCATTATTTATCCCGCCCGTCCACTGTAGGACTGTTTGTTCTCACTCACACATCCATCCACGCTCGCTCTGTCGCACCTTGGTTTGTAATGCAGACGGGCTTTGCTTTGTCGTTTCGGTAGCCTGTGTTTCAGTTGGGGTGCTAACTCCCTTCGCTTCCCAAGGGGACCCCACTGCACTGCATATCCATCTCTAGACGCTGTAATAAAATACCTGTTTTCACTTGAACTTAGTCTGGCAGCAGTGTTTCTTCCCGATGATGACACGGCAAGATCCTGGAGTGCACAGGGCCCAGGGCAGTGCTCACCGTCCCCAAGCAGAGAGGACGGTCGCTTCCAGTAGAGGCTCCACCTGCTCCTCAAGACAGGCACTGTGGCCACGACAGACAAGTTACGATGACTTCCCCCACCCCGGTCTCAGAGGCCCAGCCCCTGCTCAAGGGCTGACAACTATGACCAGGTCAGGACTACCCAGGGCAGCTTCCTTTTAGCCTTCCTAAACCGACTACTTAGCGATCTTAAGGCCACCAACAAACCCTGAGGTCCTGTTGGCACTCAGACGGGGGCCTGTGAGCGCCAGAAGCCCTGTAGGCTGGGTCCCAGCCCCCCCTTGCCCTTCCTGGCTCTGGGTTCCAGGCCTCCCCACTCTGTTGCTCCCAGGCACGTCAACCTTGAACCTGGGGAGGGCCTCGCTTCCCTCAGGAACGGCTGTGTAGATGCAGGACAGGCGCACGGCAGAGGACAAATTTCCCTCTCTGCAGTCACAGCACCACTGGCCCGTATGGAAAAGAGGTACCTTTATTTGAACAGAATATACTGGCCACCCCAAAGGCAAGCCTTCCAGCTCTGCCCCAGAGGCGTCCGGCCAGGGCCTGCC EMBV3_15860 CCGGAGACTTCAGCCCCAACATGCACGCCTCGCTGGTCAAGTTTCTGAACCACGTGATCT Gene GeneID:618325|HBQ1:NM_001080333:23_cdna Constitutive 0 NULL GeneID:618325 25 GENE HBQ1 MGC148736 hemoglobin, theta 1 EMBV3_32317 TGAATGGGTCTCCCCTCACCTGCCCACCCAGTTTAATTGTGCTTAGAGCCCTGGAAGATT Gene GeneID:514938|ARFIP2:NM_001034477:34_cdna Constitutive 1 NULL GeneID:514938 15 GENE ARFIP2 MGC126954 ADP-ribosylation factor interacting protein 2 EMBV3_36285 GATCCCTTTATGAATCTTGTGATAGATGAATGTGTGGAGATGGCAACTAGTGGGCAACAG Gene GeneID:100297108|LOC100297108:XM_002690160:26_cdna Constitutive 0 NULL GeneID:100297108 9 GENE LOC100297108 NULL similar to small nuclear ribonucleoprotein polypeptide G EMBV3_07467 ACACAGATTGAAGACGCGGTCTCCTTGTGGGCCAAGCTGAAACTGCAGAAGGCATCGGAA Gene GeneID:523250|SF3A3:NM_001034548:194_cdna Constitutive 0 NULL GeneID:523250 3 GENE SF3A3 MGC129027 splicing factor 3a, subunit 3, 60kDa EMBV3_09784 CTGGCAAGGTTTTTTTGTAGTGGCGATCTGGCAGTATCCTGCATAACTGTTTGGGTGAGG Gene GeneID:613824|LOC613824:XM_002684666:8_cdna UTR3_Alt 1 NULL GeneID:613824 1 GENE LOC613824 NULL similar to CGG triplet repeat-binding protein 1 (CGG-binding protein 1) (p20-CGGBP DNA-binding protein) (20 kDa CGG-binding protein) EMBV3_20193 AAGTCCGGCGGGGAGACTGTTAAAACCTTCAGCCCTATAACCGGAGCTACCTCATCTGTT Gene BVT0102_057694 + 0 NULL GK000012.2:1752050-1790001 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036088 TCONS_00034450 TCONS_00034449 2 XLOC_021070 XLOC_020682 Coding TCONS_00036088 XLOC_021070 Coding Coding TDRD3 12:1527000-1755790 j TSS26339 6275 1 TCONS_00036088_10 744 0.22804780876494 14 0.972634173845771 8.47551528157807e-05 8.31040753885425e-05 6.04155942596324e-05 6.72971013803506e-05 9.60809127972915e-05 3.43373661917279e-05 3.39011494249286e-05 2.19699505859983e-05 9.19259639423266e-05 1.86246162165327e-05 5.98824791274777e-07 1.20062172575169e-05 6.76626159371168e-06 0.00013950980616716 1.40223965790958e-06 0.00093436066644675 0.000379262955229739 0.00105255960441156 1.43960489948208e-05 0.000205665386318312 4.46893694598591e-06 0.000180043487987903 0.000173354994815233 0.00050796148568576 6.08725121673048e-05 3.24212225929611e-05 3.09180733681112e-05 3.15906813895607e-05 2.39067720526271e-05 6.73156801155756e-06 XM_005213542.1 TDRD3 PREDICTED: Bos taurus tudor domain containing 3 (TDRD3), transcript 0.0 4830 100.00 0.426613545816733 XM_005266558.1 TDRD3 PREDICTED: Homo sapiens tudor domain containing 3 (TDRD3), 0.0 3678 89.87 0.436653386454183 TCONS_00036088_10 sp|Q2HJG4|TDRD3_BOVIN TDRD3_BOVIN Tudor domain-containing protein 3; 0.0 1466 96.77 0.998655913978495 0 noncoding 0 0 0 0 -0.0909284232803858 0.560340455873721 0.000794237851633794 0.987217520775046 CTTTTCCCTTAAATTTTTATTTTGAAAAGCTTTAAACTTAGCAAAAATTAAAAAAAAATATATAATGAGCACTGGACCCTCCAATTAGATTCCATCTTAAACATTTTGCCACATTTACCTTCTTTCATAGCATGCACACACACACACACACACACACACACACACACGTGGTTATAAACACCACAGCTTTTCAGCCATAAATATTTGACATAAAGTTTCTTATATTAAGGACTTTATCATATCTAAGAAAATTATAATTACATTATACTATCCAGTATCTAGTCCATATTGAAATTTGTCCATTTGGCTACAAATCTCTCCTGTTCCTTCCCCTGATTCTTTTTAAATCCATGATTGCATGTTGTTGTCATGCCTTTTTATTGTTTTTAATCTGGAAGAATTCTTTTTTAAAAAATTACATTTTCACAAATGTAAAAGTTAAATTACATTTGTACAGTCCCTGCCAGGTTTCTTGTACAAGATGCCAGATTCCAGTTTTATCTGCCTGTTTCCTTATGTTTTACTTGTTAAATTCCCTATGTATCTCAGCCTTGGCACTACTGACATCTTGGATCAGGTAGCTATCTCGTGTATTGCAGGATGTTTAATATTTTCCTGTTCCCACCAGGTTATAACAACCAAAATGTCTCTATACATGCCCAAATATGCCTGGAGGGCTGGTGGTGGAGGTTTAGATAGGGATCTAGAAGTTCACTCAAATTCGGGGTTAACAACTTTTTCGAGAATATTTGTCATATGATGTGTATTTCTGATTGCACTGTATCAGTAAGCACATAACATCTGATTGTCCCATTATTGATTAGCCTTGATTACTTATTTAAAGCAGTCACTTTTTTTTTAACATACAGGTATGTTTTTCCCTTTTATAATAAGGGAAAAACAGACTTTTGATACTTTAACAACTTGATACTTTGACACCGAGTGAACATCCTGTATTCCTACTATCTTTCACCCAGTGACTTTTGGCATTCTCTAGTCTGAATCAATTGTGACTGATTTGCAAAATGGTGATTTTCTAATTCTATTATTTGTTGTACATTTACTCTCTGGAATTTCTATGAAAGAAAAGTTTTCATCCTTCCCTTTATTTATTTCTACTGGCGCTTTTAAATTCATGCATTTTCTTTACCCAATTTTTAAATTCAATTATTCCAATTACTTTTTTTGAGGCTTATATTATCTCAAATTCCTCCAGTGGGAATCTTCAATCCATTCTTTAAGCATTTCTTACCATAAGAGAATTTAATGTTTTATGGAGAATTTTAATAAAGTTATTGTTAAGTACCACACAATGGTAAATTCTTATTGTATACACTGCACATGAAACCATATATTTAGCCAGTGAAGAATTCTGATTGGGACAACATATTAGTTTCACATTTTGACTACCTGATGGAAGAGCAGACTCAGTGGAAAAGACTCCGATGCTGTGAAAGACTGAAGGCAAGAGAAGAGGGTAGCAGAGCATGACATCATTAGGCAGCTTCACAAACTCACAGGACATTAATTTGAGTAAACTCCCTGAGACAGTAAGGAACAGGGAAGCCCAATGTGCTGCAGTCCACAGGACCACAAAGAGTTGAGGACAGGACTTAGCGACTGAAGAAGAGAAAATTCTGTTTCACAACCAACAAAAATTACCAGCCATTTAATTTTGATTCATCTATGTGAAAGAGAAAGTCGCTCAGTTCTGTCTCACTCTTTGCGACCCCATGGACTATACAGTCCATGGAATTCGCCAGGCCAGAATACCGGAGTAGGTAGCCTTTCCATCATCCAGGGTTTCTTTCCAAACCAGGGATCGAACCCAGGTCTCCCACATTGCGGGCGGATTCTTTACCAGTTGAGCCATAACGGAAGCCCAAGAATTCTGGAGTGGGTAGCCTATCCCTTCGCCAGGGCATCTTCCCTACACGGGAATCTAACTGGGGGTCTCCTGCATTGCAGGCAGATTCTTTACCAACTGAGCTATCAGGGAAGCCCTTTGAGTCATCTATTCACCTTCAAAATGGTAAATCTTCTCCTGACTCCAGGATATTTTGAAGTGGATGTCGCTCAGTCCTGTGTGACTCTTCGCGACCCCATAGACTATACAGTCCATGGAATTCTCCGGGCCAGAATACTGAAATGGGTAACCTTTTCCTTCTCCAGGGAAATCTCCCCAATCCAGGGATCGAATCCACGTCTCCGGCATTGCCGTCAGATTCTTTACCAGCTGAGCCACAAGGGACGCCACGAGGGATATTTTGAATGGTGCCTAAAAATAGAAATACACAGATATAATACGTCTCGCCCAAACATTGTATACAATTCTAAAACTGCTTCAAAATATGTTTCATTAAAATCAGTAACTAAGCAATGTGCTTGGGCACACATTTCAACAGCATCCCACTTAAGCAACATATCGTGATTTTAAAACTATGACTTTTGGGAAGCCCAAACGAAATAGGTCAGTTAAAATGAAAACAAAATTAAGGAATTTTAGCTTCACTCTGTAATTATCCCCCTCTTTCTGTGAGAGTCGGTTTCCTCCTCAGTCTCAGGTGTGGCTCTGCCGGGTTTCACAGACTCTGCTCTAAGTTCATGTTGGTGATGATGAAACAGATGAGGTAGCTCCGGTTATAGGGCTGAAGGTTTTAACAGTCTCCCCGCCGGACTTCACAGCTTGGACCAGCGCCACTCAGAAGAACCTTTCTCCTCAGCGGCCGCAGGAAACGACGGTGGAAGGCAGGGACAACTCTAGAGTATCTCCCGGTCCCACAGCCCCTTCCGCCTGCTCCTTTGATTGGCTGGTGTGAGTCTCGGCCGCCCAATCCCGTTGGAACGTCTCCCGCGCCGCTCGGCGCCGTCGCCGCGCATGCACATTCCGGACCCGCCCCTCGTTTCAGCCCGGAGAGCCGGAGCAGGGCACCGGCACGGGGTGGGCGGGAACTAGGCCTGGCAGTACCCGCGCCGACGTCACAGCGCCGCGCCGGGGCCTGCACGGGCCCGGTGGGAGAACAGCGTGAGAGACAAGCACAACACAGCTCCCCGAGTTCCCACATCCCTTAGGTGCAGGTCTTCTTGGGTGCACGCATTCACTTTCATTGTAGCGCGGGACCTGGACAGTCCGATTTGACTCTGCGGAATAGAAAAAATTCGATTATATTGTTTTCTCTGCACCCGGGCAGATGGAAAAGGGGAAGGAATCGTTATAAGAAAGTAGCTTTTCTCCCGTGTAGAGTGGGTCGGGAACACTGTCCCTTTGAGCTTCACTGTAGGAAACGCGGCCGCCTCAGAGCCTAGCTGGCAGCGCCTTCCCGCCGCCTAGCGCCTCAGCTCTGCCCTCGGGAGGCGGCCGCCTGTGCGCGCTGGGAACGCAGGCTTCTTTTCTGCCGCACAGAGGACCGCCCCACGGGTCTCCACGGCGTGAAGCTCGGGAAAGTGAGCCTGGCGACGTGCAGCCGGCCCTCCGCCGCGAGGCCGCGCTGACAGACCGGCCTCGGCCCGTCCTCCGCGCACCGCCGCCCCCGGAGCGCGACGGGCTCGCAGCCGCACGCCGGGCCGGCCCCCGCGGCCGCTCGGAAAACGCGGCGAGCGGAACCCGCACGCGGAAGCGCCCGCCGCACTGAGCATGCCCAGTCGCAGAGCCGACCGGAGGAGTTTTTTTCTTTTCTTTTTTCTTTTTCTTTCTTTTTTTGGGGGGGTCTCAAGTAGCAGGCCTCCCCCAGCCCCCTAGCCGAGCCCCCCAGCATCCCGGCATAAGCAGCTACCATGGCCGAGGCTCCCGGAGCGGCGCTGTCCCGGGCGGGTTGGTATCTTTCAGATGAAGGCATTGAAGCTTGTACAAGTTCTCCTGACAAAGTCAATGTAAATGACATCATCCTGATTGCTCTCAATACAGACTTGAGAACAATTGGCAAGAAATTCCTCCCCAGTGACATCAATGGTGGAAAGGTAGAAAAGCTTGAAGGTCCATGTGTTTTGCAAATTCAAAAAATTCGCAATGTTGCTGCACCAAAGGATAATGAAGAATCTCAGGCTGCACCAAGGATGTTGCGTTTACAGATGACTGATGGTCATATAAGTTGCACAGCAGTAGAATTTAGTTACTTGTCAAAAATAAGCCTAAACACACCACCTGGAACTAAAGTTAAACTCTCAGGTGCTGTGGACATAAAGAATGGATTCCTGCTCCTGAATGACTCTAACACCACAGTTCTTGGCGGTGAAGTAGAACACCTTATCGAGAAATGGGAGTTACAGAGAAGCTTGTCAAAACACAATAGAAGCAATATTGGAACCGAAGGTGGACCACCTCCTTTTGTGCCTTTTGGACAGAAGTGTGTGTCTCATATCCAAGTGGATAGCAGAGAACTTGATCGAAGAAAGACATTACAAGTGACAATGCCTGTCAAACCTCCAAATGACAATGATGAATTTGAAAAGCAAAGGACTGCTGCTATTGCAGAAGTTGCAAAGAGCAAAGAAACCAAGACATTTGGAGGCGGTGGTGGTGGTGCTAGAAGTAATCTCAACATGCATGCTGCTGGTAACCGAAATAGGGAAATTTTACAGAAAGAAAAGGCAAACAAATCAGAGGGAAAACATGAAGGTGTCTATAGAGAACTGGTTGATGAGAAGGCTCTGAGACACATAACAGAAATGGGCTTTAGTAAAGAAGCATCAAGGCAAGCTCTCATGGATAATGGCAACAACTTAGAAGCAGCACTGAATGTACTTCTTAACAGCAATAAACAGAAACCTGTTACAGGTCCACCTTTGAGAGGTAAAGGGAAAGGCAGGGGGCGAATAAGATCTGAAGATGAAGAAGAACTAGGAAATGCAAGGCCATCAGCACCAAGCACATTATTTGACTTCTTGGAGTCTAAAATGGGGACTTTGAGTGTGGAAGAACCTAAATCACAGCCGCAGCAGCTTCATCAAGGACAAAACAGAGTGTCAAATACTGAGCAAAATGGAGTAAAAGATAATAATCAACCACGATATCTTCCTCGAAATGATACGAGACAGCCAAGAAATGAAAAACCTCCTCGTTTTCAAAGAGATACCCAAAACTCAAAAGCAGTTTTGGAAGGCAGTGGATTACCTAGAAACAGAGGTTCTGAAAGACCAAGTACTTCTTCAGGATCTGAAGTATGGGCTGAAGAGAGAACCAAATGTGATAGATCGTATTCTAGATATGATAGAACTAAAGATACTTCTTACCTTTTAAGTTCCCAGCACAGTGATACTGTATTTAAAAAAAGGGATAACTCTATGCAAAGCCGATCAGGAAAAGGTCCATCCTACGCAGAGGCAAAAGAAAATCCTTTTCCTCAAGAATCCGTAGATTATAATAATCACAAACGTGGGAAAAGAGAAAACCAAACAGCAAATTCGGATCATTTTTATGACAGGAAGCCACGAACAATAAATAATGAAGCTTTTAGTGGTGTAAAAATTGAAAAACATTTTAATGTAAATACTGATTACCAGCATCCTGTCCGAATGAATAGTTTCATTGGTGTTCCAAATGGAGAGACAGAAATGCCACTGAAGGGAAGGCGAGTGGGACCTATTAAGCCAGCAGGACCCATCATGGCTTCGTCCTGTGATGATAAAATATTTTACAGTAGTGGTCCCAAAAGAAGATCTGGGCCAATTAAACCTGAAAAAGTACTAGAATCATCTATTCCTATGGAGTATGCAAAACTGTGGAAATCTGGAGATGAATGTTTAGCACTTTATTGGGAAGACAACAAGTTTTACCGAGCAGAAGTTGAAGCTCTTCATTCTTCAGGTATGACAGCAGTTGTTAAATTCATTGATTATGGAAACTATGAAGAGGTGCTACTAAGCAACATCAGGCCCATTCAGTCAGAGGCATGGGAGGAAGAAGGCACCTATGACCAAACTCTTGAGTTCCGTAGAGGAGGTGACGGCCAGCCAAGACGATCCACTCGACCAACTCAGCAGTTCTACCAGCCTCCCCGGGCTCGGAACTAATGCAACAAGAGTCTTTATGAAGAAAGGAGCTGTTGACTGAATCATCCTGGTCAGAACCTGTTGATAGACCTCCTGCTTTCCCTTCGGAGTAAGATGCAGACATGGTGGATATTATTATTTGGAGAACTAAAAGGCAGATTTTAGGGGGAAAAAAAATTCAACCCACATAAAGAATGGGGAAAAAATACAAAGTTAAATAAAGCAACTTTTACAAGTAGAAGAATTTTTTCTTCTGCCATCAATAAAACCAATGCACTATTAAATAC EMBV3_34591 GTGCAACTCAGTACTTAAAGGAGACAATACAAGGTCAGATTAAAGGTTATTGGGCTACCC Gene BVT0102_018745 + 1 EMBV3_20858 GK000020.2:37393798-37458000 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113882 1 XLOC_069128 NonCoding TCONS_00113882 XLOC_069128 NonCoding NonCoding - 20:37394254-37403400 - TSS85058 9146 1 TCONS_00113882_14 95 0.153181718784168 1 0 2.52892938993224e-05 7.69069155075455e-06 3.03542704471803e-06 1.81591575144119e-06 0 3.91105709234586e-07 2.55049930724502e-06 2.58679506881052e-06 3.70955735963398e-05 0.000166600566333637 4.90574607974624e-05 7.10510957289701e-05 1.35602580008513e-05 0.000120351110335638 7.3358550659728e-05 0.00104328857712425 0.000931224072298487 0.000842214658039304 9.68958332606079e-07 1.33669805781731e-05 1.23099261696495e-06 0.000530862461267608 0.000211298216866247 0.000524237156324375 7.19663646876391e-05 2.31099051072559e-06 2.56249006753529e-06 0.000109221316067994 0.000143285315038619 0.000201372545121417 NM_001101133.1 FAM26D Bos taurus family with sequence similarity 26, member D (FAM26D), 7e-90 338 83.43 0.0359720096216925 NR_046262.1 LOC646719 Homo sapiens uncharacterized LOC646719 (LOC646719), non-coding RNA. 0.0 1031 68.31 0.291930898753553 0 noncoding 0 0 0 0 -0.0924710286033134 0.436417172717213 0.0552576972544287 0.343322438581841 GGCCACGTAGAGGACGCCCGCGATCCGACGGCGACCGAGCATTTTTTAAATGGTGTCCCTGCAGCCGGGTGGATGGATGTATCGTATTGTACACTCTTCTCTCTTTTTGAGAGGCCGGACTTTACGCCCGTCTCTGCATTATTTCTGCGGAGTAAGGACGCAGCCCTTGGAGGAGGCGAAGATTCTCAGCTGGATTGAATTGGAATCGTGTTTGTAATGCATTTATTTCTGGAAATATGCGGTCTTTTCTGGGCTAGCTTTTTGTTGGCGGTGGTTTTGGCTCTTGCCTCGCAGTCGGGATAAAGGCCTGTAGGCGACGCTGTTCGAGCGAGGAGCCGGCCCGCGGTGGGCCCGGAGCGCGCCCCATTCTAGGTGTGGGTGGAGCCGAGCGCGCGGGGAGAGCCGGCGGACTGCGGGCCTGGGGCCCGCCGATTTCAGACATCGTTTTCCTCTTTACGCTCGAAACAGAGGTCCTGACCAAGGCTGGAGTACAGATGCGATTTTGTGTACAGTACCGAGCCTTCTGTAGTCTCTTACTGAAACACCTGAAATAACTTTGTCATACAGTTCACTATTAAGTTTACTTCTGTAAATTTAGAGGGTGCTATTCTTCGGGTAAAAGTGCCTAGGTAAGCGGATTTTATTCAAATGGGACGAAATTTGTGTTATATTATCATGAGTTTACTTAAGTTGTATGTGAACTGTATTTGTCTGTGTACCAGTAGTACGCTGAAAGTTAAACAGGCAAATTTGCCCGCGGGCCATTCCTTTTGCCTCAGAGATCGCTACAAGGACTAAATCAGATCTTACACGTCTCTCGAGCCGGCATTTGCTTAGCCGGGAGTAAGAGCCGAAGCCTTGACCACGGCCTGAAGGCGGTGCGCGCGGTGGGGCGCGGGGAGCCGCCTCGGTCGCGGAGCCAGCAGGGTGTCTGCTCCGCCTTCTGCCTGGCTCCTTCCCCGAGTGCCACAGAGTTTCTCTCTTACTTTCAGGGTTTTGCTCGGCTGTCTCCTCGGGGCTCTGTGGCTTCTCTTTAAACTGGACGTTCCCGATTCCCTCGTCATTTTTGTCCCGCAGGCATTCTACTTATCATGCTTGTTTATCTCATCTGTTTGTACCGATAGAATAATTAATGTAAGCCCCGGGAGGGCGAGGTTCTCCTCCCCGGCCCGCCCCAAACTGGTGTTTTGTGTAGAAAAGACTGCCTGACACAGTATTTGCTTAATAGCTGGTTAATGAATGAACGATGATTATAAGGGCCTTGACCTCACCCCACACATACACCCGTTTCTGAACTCTATTTCTTACGTGTATATATACTTATATGCTACAGAGAACTTTTATGAAAGGTGTGTGAAAACAAAAGAAAACCTGGGGGCAAAGAGCAAGTTTATTACAAAGTTCTAGAAAACGGCACTACTTCTAGACATTGAAAGCCCCCTACAAGCACCCGAAGCCCACAAACTAGTGATAGTTACATGTTTTTAGATAAATGGGCTTGCTCGGGGACACTACATTATGTGATCCATCGGATTATGTGAGTATATTCATATTGCTTTCCTCTCTTCCTGAATCAAACTGCATTCTTCATCCATTCTGTACCCTTTCTTGAAAAATCATGCTATTTTCACTAAGTTAAAGTATGTGAAAATTTGGTTGGCTTAGTCCAAATCCAGCACTGCTGTAGAAATTCATTCAGCAAGTACATATCGGGCACAAAATATATGCCGCCCGGCACAATGATTCAAAAGATGCTGTGTTTCTGAGGCTTAAAGGACCACATATGGCTACTTTGGTTACTACTCAATTATGCTGTCAAGCAAAGCAAACGCTAGTTAGATTTATTTTTACAGTTTCATTTTGAAGAAAAGGTTCAGTGAAAGCTGAGGTCAGGCTTAGTTTGGATATTTTAATTCACCTTTTAGTTTGCTGTTCATTTACTTACTTTATTATGATAAGCTCCAGGTATACCAATAAGTTAACTGATAAATTAATTTTTGAAAACTGAAACATTTAGGATTTTTACTTCCTAGTGGTTGGATGAACAAGACTTTTAAAATATATGCTATAAGCCTTTGGGAATCATTTCATGTATGGAAATTTTGGACAAGAAAAGACAATCTTGATAAGTATTTCATAACCATTAATACAATTAATTAGACATTGTCTAGTAAATCAGTTTGTTCATTATTAAGCACAGCTTTGAGTAATATACAGATGGTTCAGAATGTGTTTTTCATTCCTTTTTAGAATACTAATGTTTCAGTTTTCTTAGAGAAGCAAAATTATCTTCTTATATACTTCCTTAAATGTTACTGTTAAGGTGAAAATTTTGCATGTTCAGGTAACAGAAGTCTTGGCATTGTTGTACCATTTAATTTAAAGTTTTAAGTATTTTTAGTTTCTTCGCTCACTACTTAATAGGAACTTACTAGGTGCTATAATTAGCTTTTACAGTAGGCACCTCCTAAACATTAGTGAATTAAAAACAGGGTCTCTGCCTTTAAGTGGTTTAACTTGTAAATAGTTTATAACAATTTTTTTCCAAGTCTTGGAACTAATGAAATTGTTTCAATGCATAACCATTAAATCAATTAGTGTTTTGTTTTCCTAAGTTTAAATATCCAAGTTGAGATCTTAGGTAGACTCTACTAATATAATCTTAGTGTTTAAAACTTTTATGTCCAAAATCAGTTGATTTATGGTGGTGTTATGTTTCACTGCTAGATCCTTGGTTTATCAATTCTTAGTTTTATAGGGTAGCCCAATAACCTTTAATCTGACCTTGTATTGTCTCCTTTAAGTACTGAGTTGCACTACTCACTTTTTTGCCAAAGATATTCCCGTATATTCCTATATGTATTCTTGATCAGTAAGCTCCAAAAGATTTAATAAAATATTTTAAAATGTATTATAAGTATTAACTATTGAATGTCATTAACAGGAATTGGTATAGTTGGCAAATTATGAGTTATTTTATTTAAAATATCTTTAAGATACAATTTTCCATAAAATGATAGGAGTAAAACATTTTAGAAAATAATTTTCTTCTCATTATGCCTACCATTTATCAGTGATAAAATTAACTTACAGAGACAAATTTTGAAAAAACAGACGTAGTGTATATATGTTTTGTACATTATTTCAGACCACCCAAATTATTTCATATATAGGATAATTAAAGTTACTTTAGGATGATTTTTATCTTAAATTTTGATAAAGAGGTAGTTATAGATGTTGATTTGAGTGTGAGCTACAAAATTATCAGTCTGTAAATGTTTCTATTTCAAGTTTTCAAAGTAAATACCTTAATCAAATCGGTGATAGTGTTTATGACAGTTATTCAGCATATCTTATCCATTTTTGTTAAGATGGTAGAAATGAATGGTTTTTCACTTGAATGACTTTCTTTATGTTGGCCTTTGAGAGAACAGGCTTTGTCTTTTCATTAATCTTTCTCACCTCCAATTAAGGATTTTCTCTAAATTCATAGATTTTATTATTCATTGTTCAGTCGCTGAATTGTGTCCAGCTTATTATTCATACCATCCATTTATAATCCTGTGACATTCCTATATTGTTCTTTATATTTTTGTGTAGCTATGCCTTGTTTTCCTGGATCAAAGTGACTGGTTATGTGTTAAACTACACTGTAAGTTTCACTGTGCATTACATTACTGTGGGGCCCTCAAAAAATGTACTTCTGAAATATAAATTCAATATAAAATTATTTCAAGTCATTAAATCTTCACGAAAGCCTAAACTTACGGAACCTACACATGTGCTGAATGTGAACCAGAGAATTAAACTCTACATGCATTTTAATACTAATGTGGAACAACTGTTTAAAATTGATTTTATCAATGAAGGAAAACATACAAACTCCATTGAAAACTTAACATCTAAAATAGGTATAAAGGGAGTGCTTATGATGCACATTGGGTCATGTACCATTATGGGTCATGAAATAAACTCAATGGGTTAAGAATAGTGTTTTTTATTTGAAATAGATGAAGCAATCAAAAATCTTAAGAGTACATCACATAATAAAATCTGTATAAACATTAATTCTGTTTATGTGTGTGCTAGGTTGCTATTTTTTATTAGGGATATTGGCCAGAAAAAGTAGTGTTTTATCTACAGTTCAGATTTTCCTTTACTTCCTTAGAAAATGAAAAAAATGCTAGAAATTTATGACTGCCTGTGAAATAGGAATTTTAGAGGAGGCACTAGTATATTTCAGAGAAGATTTTATATTACTTAGTCATAGAAATTCAAAGCAAACTGCTACCTTCACAAAGTAATTATCATATGAACAAGTTACTCCCTGAAGATAATAGATACCCCTCTGAAAGATAACAAACTTTCAATAAGGGTTTTCTCTCTAGCCAAAGTAAGGAATAATTTCTTAACTTTACGTAAATAGTTAACTTTCACTTGCCATCCAACTCATCTATATATTTAAGTAAGTGTACTTAAAATTGTGTACAGAATTCAAAAGGAGAGAATTGTCTAAAGAATTGCAAGGGAGGCCAGTATGCTGTGATCAGTGGGATGAAGACTACCTACCAAACAGAAAACAAGAATTAAAATTTAGACATTTAAAAAATATAAGCATTTCATTACTTAACCATTTCACCTTATTTCAGTCTAGATTTCAGTATTGTGATGTTGGTGAGTGTTAATAAAAGGCTTTTTTCATACATAGGATACCAGTACCCTTTCAGTTAGTTATTTAAGACCTAGTTTGATTAAAATCTTAGCTAAACACAAAATTCTAGAGGACTGACATGAGAATCTCTAATTCAATTACTCAACCAAAGTTATTCACCCCAAGTATTACATTTCACCAATAAGATATAAACCCTATTGAACTAAGAAAGGAATTATATTACTAACCAGCAGAGGGAGCCAAGTCAGTCCTGAAAGATAGGAGTACAAAGAAAGACCACATGACTTCCTGTTTTGAGTTTGTTGTGGCAGCTGTTCAGTTTAGCCTACCAAAAAGCCAAGTAAAAAGATAGGAAGGTTACCAATGTATCAGATGTGGATAGGGTAACAGTGTAACTGTCAGAATTACCTTGCAGGAAGCAAATTGAAAGAAAACATTTATGCTTAAGTTGAGGACAGCCCTGCAAAGAATGGGCAGCATAAAAGAGAATTCCTTAAAAAAAAAAAAAACACATTAAAAATTAAATGAGTAAAATATGCAAACTAATATTGGCTTTCTTTCTACTATAGGTGGTGAAACTCAGATGGATCAGAACAAAGTAATGATAAGCTTATTAGCCATTGAACAGAACCAATTCAAGTAGAAATATTAATATAAAAGTGGAAAATGTCTCAGTAGTATAACCTAAAAAATAGTACCTTAGGACATGATGAATTACTAGATGTAACAATAAGCCATTTCTTAATCCATTTTTATTGAAAGCTGAAAATAGTCTCTAATAGGCACATTTTAAATAAAGTTGGTACATAGATTGATCTTACATTAAAGTTATATGTAATTGTTCCCATTACCCTCTATAAACAAAGCAAAAAGTTAATACCTTCTTGGGTTTCCCTGGTGGCTCAGTGGTGAAGAATCTGCCTGCCAATGCAAGAGACAGGTTCAGTCCCTGAGCCGGGAAGATCCCACATACCTCAGCGCAACTAAGCCTGTGTGCGACAAATACTGAGCCTGTGCCCTAGAACTGAGGAGCCTCAACAACAAGTCTGGGTGTCCTAGAGCTCCACAGTAAGAGAAGCTATTGCAAAGAGAAACCCACACACCACAACCAGAGAATAGCCCCTGCTTGCTACAACCTGAGAAAGCCCGTGCTGCAACAAAGACCCAGCACAGCCAAAAATAATTAACTTAAAAATTTTTTATTTTAATTTAAAGTTATACCTTGTTTCATTTCAGCTGTTTGGGGGAATATAGCAGCTAAAGGCAGTTCTACGGTCAGGTTATTTAATACCTTCTAAGAACCTCAAAATCCTTGATAGAATGATTTTTGGAAGCAAATATTAAGAGCTGGGTGTTAGCTAACTATCAAAATTTAAAGGCCCAAACAATTACAGTTTAATAAACTAAAATAATGGTAGTCTAGGTGACTTAGCATAGCATAGCATAGCCACTTACTCATTGAAAGGTATGTGGAAACCTTGTGCAAAGCACAGACAACAGATTCAGGCAAACTTTAGCTATAGATATATTTACTTAGGAGCTTCCCTAGTGGCTCAGTGGTAGTGAATCCTCCTGCAATGCAGGAGAGGTGCGTTTCATTCCCAGGTCAGGAAGATCCTCTGGAGAAGGAAATAGCAACACCCTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGAATCCCAGCAGGCTACAGTCCATGGGGTTGTAAAAGAACTGGACACGACTTAGTGACTAAACAACAATATTTACTTAAGTGTTCATTATAAATACTCCTTGAACATGTACTATCTCCATAGGACATAGAGCATGTCTTCATTATAAACTCGATAAAATTCTTAATATCTTGTTGAAAGATTTAATTTCATTATATGAAGAGTCGTAGAAATTGAATATGCAATCCATTGAATCCAAGGAGATGGCACTTGGAAGCAAATCATTTAGTATTGAGTACTAAAACGTAGATTGTCAACCTCTATAAGTCAGTTCTTTTATAATACTGCATTATACTGACATTCAATATATTGTCATCTGGTGTCAAATCAGTTAATCACAGCAATGATATGTAGTAAGTAAAATTCATCTAATACCAGTCCTAGAGACATTTTAGTGCCGAAAAAGAATTTAACCAGTATTACTACTAATTATGTGCTTTTTTTACATGTAACTTGCTATAAATATGGGCTGTTAGAATTCCATATTATACTTTTTATTTAGTTAGTGTTTTCATCTGTGGGAAATGCTATAATGATCTTTTAAAATGTTCATTAATGAAGTGGCAATAGTTGGCCATGAAACATTTCTTTATTGATAAGCATAATAGTAGGTTAACTCATCAAAACTCAGTAAAAACTATTAACTCTGTCACAAAAGTCAACATTTCACAGTCTAAAATATGGAGTATGTTTTTCTGCCTAGATTTAACAATCTACAACTCTGTGAAAATAAACTCAAAACCAAAGGAAAGAAAATAGCTCATACCTTGTTTTATTCCAGAGTAGGGGATGGTGACAGATTAAGAAAAGCACCAAAAAAAAAATGACTTCTAGTGAACAAAATTAGATCTGAGTAAAGAATTTTTATTTCCCTAAAAAAAATTAAATACAACATTTTAGTCAAGAATTTATACCCAAACATGGATACTGTTTTTAACACTGCTTTTGAGATACTTGAAATACTTTTTTCTTTGAAAAACAGCACCAAAATCCATATTGCTTTAGAAATCATGTTTCTAGTTTATCATCTCGGCCCTGCCCTGTTGAATTCTACATCTCTTCTAAAGCATCTCTCTAGCCTTCTCACTACTGCCTTCTTCCTAATTCTACCATCAACATTCATTAGCTTTCTGCAATATATTCAGCTGATTTCTCATGCTCTTACCCAGACAAACTTTGTAACTTTTGCTTTATGTAAGGAGAAATAGCTTATTATGAACTTAGAAGAGCTATAGAAGTACTTGATAATATATATGCAAAAGTATTTTTAATTTGAAGAACTTACTGTGCATCTTACAGGCTTTGTGTTAAAATTTTTTAATGTCTATTTTGTGCTAGAAGCTTAGAATTGGTAATGATTTAATGTTTAATCCTGTGCTTACGTTAAATTCTTTGGGAAATGCTCACCAGAAAGCTGGCTCGAAATTATCCTGACTACAATGTAACTGTTCAGTATGGTAAGAGTTAAGTGTGACTTCTGAATAAATGTGTCTATAATTCTTAGTAACAGAAGACAGTGTGCTTCTTAAAGAAATTTTGAGTTTGTATATCCGGAGTTGAGATAAATGTGTTTTAACTTACATTTATATTTTTACTACAGGTCCTTCATCCAATAAGCATGTACCAGCACCTGTGTACTGGAAACAGTGAATCCAAATGAATAACCTTGTCTCTTCATACAACTCACAGCCAAGAGAAAGACCAGATCAAATATATTTAACACAGTGAGATAAATACAAAAGTGTTGAAGGTGTTCGTTGCTCAGTCACGTCTGACTCTTTGCAACCCCAGGGACTATAGCCCACCAGGCTCCTCTGTTCATGGGATTTTCCAGGCAAGAATACTGGAGTGGGTAGACATTCCCTTCTCCAGGGGATCTTACCAACCCAAGGATCAAACCCAGGTCTCCTGCAGGCAAATTATTTACCAATTGAGCCACCAGGGAAGCCCAAATGACTATGAGTTGTATCGAAAGTGCTATGAAAGTGCCAGCAATACTGGAGGTTTGGAGAAAAGCTTCACAGAAGAGGTAAAATTTGAATGTTAGTGAAGGGGAAATAATTTTTGGGAGAGGAACATAAAAAGGTATGAAATTGGGAGACTGGGACTGACACACACGTTGTTCAGTCACTTGGTCGTGTCCGACTCTGCGACCCCACGGACTGCAACACGCCAGGCTTCCCTGTCCTTCACATCTCCTGGAGCTTGCTCAAACGTGTGCCCATTGAGTCAGTGATGCCATCCGACCGTCTTGTCCTCTGCCATCCCCTTTTGCCTTCAGTCTTTCCCACCTTAAGGTCTTTCCTAATGAGTTGACTCTGAATCAGGTGGCCAAAGTATTGGAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGATTGATTTCCTTTAGGATTGACTGGTTTGATCTCCTTGCCGTCCAAGGGACTCTCAAGAGTCCTCCAACAGACCTACTATTAATATGGAGTGATATTGGGTGACTTAGTTGGATGGCATCACTGCCTTAATGGACATGAGTTTGAGCAAACTCCAGGACATAGTGAAGGACAGGGAAGCCTGGTATGCTGTAGCCCATGGAATCGCAAAGAGTCAGACACAACTTAGTGACTGAACAACAATTAATATATAGCACAGGGAACTCAATACTCTGCAGTGATCCATATAGGAAAAGAATCTAAAAGAGTTTATATATGTATACCTGATTTACTTTGCTGTACAGCAGAAAATAACACTGTAAATCAACTACTTCAATAAAAA TCONS_00115018 r 5' 104 TCONS_00115018 r 5' 104 EMBV3_41179 GTGTGCCTCCTAACATAATTGATTCATATTTGCGAGACTTGCACTCAAGCAACCCTGAGG Gene GeneID:510763|MYBPC1:NM_001110773:992_cdna Constitutive 2 NULL GeneID:510763 5 GENE MYBPC1 MGC155210 myosin binding protein C, slow type EMBV3_36361 CTCCCATCCATCATCCTTCCGAACTTAAGACAGACTAGTCTCCTCCCCCAAGGCCCATGT Gene GeneID:100139577|LOC100139577:XM_002707756:216_cdna Constitutive 0 NULL GeneID:100139577 18 GENE LOC100139577 NULL similar to zinc finger protein 471 EMBV3_23968 GCATCCCTGCCTGAAACTCTGGTTTAAGAGATCTTCCTGAGCTACACTGAGTCCGGCTCC Variant GeneID:511439|SLC28A1:NM_001037458:108_cdna 557^812 2 EMBV3_00639 GeneID:511439 21 GENE SLC28A1 MGC128078 solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 EMBV3_29957 GACCACTTTCTGGATGCCAACGGGGTAGTGAAGAAAAATGATGCTTTTATGCCCTTCTCC Gene GeneID:504769|CYP2B:NM_001075173:541_cdna UTR3_Alt 2 NULL GeneID:504769 18 GENE CYP2B NULL cytochrome P450 subfamily 2B EMBV3_07925 AGGCAGGCCTTGGTAGACCCCCTTCCTCAAGCTCCTTGGTCCTGTTGAGATATGAGTTAA Gene GeneID:514383|ZFYVE27:NM_001017939:135_cdna Constitutive 0 NULL GeneID:514383 26 GENE ZFYVE27 NULL zinc finger, FYVE domain containing 27 EMBV3_36750 GGCAACTATGTCATACAGAAATTTTTTGAGAGTGAAATGGTAAAGGAGCTCGATGGTCAT Variant GeneID:540170|PUM2:XM_002691516:522_cdna 250^378 1 EMBV3_42278 GeneID:540170 11 GENE PUM2 KIAA0235 pumilio homolog 2 (Drosophila) EMBV3_17057 GGAGTGGGGATCCTCGAAGGCAGGGACTGTCTTTTCTATGTTTGTTCTAAGCTCTCAGTG Gene BVV0102_102949 + 1 EMBV3_30604 GK000021.2:26119770-26158249 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123277 1 XLOC_074831 NonCoding TCONS_00123277 XLOC_074831 NonCoding NonCoding - 21:26122567-26123542 - TSS92036 975 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.001083550682004 0 5.14687000507368e-05 0 0 0 0.000136996948759806 9.40927883411755e-05 0.000464252004053846 0 0 0 0 0 0 NM_015206.2 KIAA1024 Homo sapiens KIAA1024 (KIAA1024), mRNA. 0.0 847 78.25 0.97025641025641 0 noncoding 0 0 0 0 0.020462027972458 0.848687307384164 0.0158497752411863 0.794033159218036 CCATCGGACATTATCAAGGGATTATTTTAAAATTAGATCTCTTTATCCAAATAAAGTCATAATCATCACATCCTCATTTTCAGTCTGAATTTGCTCTGAACATAGCCTTGCAGAGAAGCAAAGAGTATTTCCCAGCTCACAGTTTTCAGATATTTTACGCCAGTACCTTCTTTAAATGGAAAATATAGTAAAGCAAATCATACTTGTATCACCCATTACTAGCTGATCATAAATTGTTAGTATTTTAGGGCATGCAGCTATGTGGTTTGTATCTGCAAGGCTGGCTTAATAGATGTGCTGAAAGTCACTGTTTGGAACCTGCATAAGCTCTGATACCCTTATTGTAATCAAGGCAGTGCTGTCTTTGTTTATAGTTTATCAGTTTAAGAGCACGGCACCTCCTTTTTCTTAAAAAAAGCTCTGCCGAGAATACACAATTCTGTTAAGTCGTATAAAAATGTGTGAACGTTGAAATCCAACCTGTTTCATATTATAACCAGCCTGCAAGAAGATTGTGCTCAATTGTGTGAATACCAAATCAGAGTATACTGTATATTGTACATTGGAAATTTGTATTTAAAGGCAACAATGTTAATAATAGTTGGTATAACAGGGGAAAAGGGTATTCGATATTTATTAATAAGGAGAAATGCAACAAACTTCCTTATTTATGCCTTATGAATAAAGGGGTATGAAATATTAGGTGAAGTTTTATGTGCACGACTCTGAACTTTAGAGTCTAAAGGAGTGGGGATCCTCGAAGGCAGGGACTGTCTTTTCTATGTTTGTTCTAAGCTCTCAGTGCACTCTTGGTGCTTGATCAATGTTATATAATACCAATAACTAAGCACATTTTTAGATCTTTTTTCAAATGGCTTGTGTAAAATTTGGTTAACGTATAATGGTTGGTTTGAAGCTATCATGTAAAATCTGCCTCTCCAAATATAATCGAGAATAAACTGGAAATGATGAAGT TCONS_00118932 TCONS_00118933 TCONS_00118934 . 3' 2799 TCONS_00118932 TCONS_00118933 TCONS_00118934 . 3' 3773 EMBV3_29169 AACGTGACAACTCATGGAAGGCCCGGTTCCAGCTCAAGCAATCAACATGGATCTTCCCAT Gene GeneID:788551|FLG:XM_002686068:315_cdna Constitutive 0 NULL GeneID:788551 3 GENE FLG NULL filaggrin EMBV3_41632 GCAGTCACTGTCCTGGCATCGAAAGCTTATTCTGGAAACGTAAAGCAGGAAACGTAAAGC Gene GeneID:783001|LOC783001:XM_002696978:159_cdna Constitutive 0 NULL GeneID:783001 22 GENE LOC783001 NULL similar to chromosome 12 open reading frame 2 EMBV3_23814 TCAGTGGGACAGAGGGGTTGCGGCGTCTGGGCAGTGGACAGCGCGCTGCAGGGGACTGGT Variant GeneID:768256|DECR2:NM_001078122:330_cdna 777^991 3 EMBV3_20219 GeneID:768256 25 GENE DECR2 MGC128381 2,4-dienoyl CoA reductase 2, peroxisomal EMBV3_26323 TCTGAAAATGCCTCGGCTGGGCCTGTGCACCCAGTTAGTAGGCCTGAAGAGAAGGCTGAA Gene GeneID:504657|ARHGAP29:NM_001102485:117_cdna Constitutive 0 NULL GeneID:504657 3 GENE ARHGAP29 MGC166097 Rho GTPase activating protein 29 EMBV3_26947 AACAGATCACAAGAAAGACTTATCCAAAAGGTTATATATCAATTGATGCCATGAAGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19525 TTCATAGACACACGCAAAGTGAACGTCCTTCCTCCCTGGACACAAACATGCAAGCACTGC Gene BVV0102_184093 + 0 NULL GK000013.2:67004792-67114711 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08721 CTATGCTACCATCATGAATCGACGTCTCTGCTGTATTCTGGTGGCTTTCTCCTGGATGGG Gene GeneID:509309|LOC509309:XM_002690754:499_cdna Constitutive 0 NULL GeneID:509309 10 GENE LOC509309 NULL similar to Olfactory receptor 4M1 EMBV3_43134 ATGATGAGAACTACATCCCCAGTGAGCATGCCAGGACATCACAGGTGATATTTACTATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29471 GCCGCAGCCCCGACCGCCGGGCACACCCAGCAGGGGAAAGATGAGGCTGCTGTTCTCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40743 CATCTACAGTGTTATCGGGGTGTCTCTTGGCCATCTGTACCCATTCCTAGGGTGATGGCA Gene GeneID:504625|SORBS1:NM_001075169:69_cdna Constitutive 0 NULL GeneID:504625 26 GENE SORBS1 MGC142406 sorbin and SH3 domain containing 1 EMBV3_40499 CTACGTCTCCATCCACCACCCCCATGACCGACTGATGTTCCCAAGGATGCTGATGAAACT Gene GeneID:507176|NR1H3:NM_001014861:48_cdna Constitutive 1 NULL GeneID:507176 15 GENE NR1H3 LXRalpha nuclear receptor subfamily 1, group H, member 3 EMBV3_00257 GTTTCAGCATCAAGCAGGTGGCTGGAAGGTATTCGAAAATGGTATTACAACGCTGCCGGG Gene GeneID:616871|UQCRB:NM_001034797:91_cdna Constitutive 0 NULL GeneID:616871 14 GENE UQCRB MGC128237 ubiquinol-cytochrome c reductase binding protein EMBV3_07494 TCCCTGTGTATTACGGATCCCCCAGCATCGCAGACTGGCTTCCAAGCAATAGAAGTGCTA Gene GeneID:360195|FUT10:NM_182987:18_cdna Constitutive 0 NULL GeneID:360195 27 GENE FUT10 NULL fucosyltransferase 10 (alpha (1,3) fucosyltransferase) EMBV3_20371 ACTCTGTTAGAGCAAGGGAAAGAACCCTGGATGGTTGTGAGGGATGAGAAAAGAAGATGG Gene GeneID:100124429|ZFP30:NM_001102539:471_cdna UTR3_Alt 2 NULL GeneID:100124429 18 GENE ZFP30 MGC159771 zinc finger protein 30 homolog (mouse) EMBV3_03725 AGGCGTCATTGTGACTTTAACAAAAACATTATCTTCCCACATACCAGGAACTATTGGACA Gene GeneID:505177|ZNF207:NM_001035268:209_cdna Constitutive 1 NULL GeneID:505177 19 GENE ZNF207 MGC128666 zinc finger protein 207 EMBV3_12214 CTGCCACACACCTGCTTTGTGACCTTACACCAGTCTCTTTCCCTCCCCGAGTCTCTATTT Gene BVT0102_042102 + 0 NULL GK000007.2:64339419-64359560 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217472 TCONS_00217475 TCONS_00217473 TCONS_00217474 1 XLOC_131514 Coding TCONS_00217474 XLOC_131514 Coding Coding ANXA6 7:64358818-64406333 j TSS161944 3240 1 TCONS_00217474_5 667 0.0533950617283951 25 0.932335732626173 2.02554976281346e-10 3.36659903613306e-12 1.14412557783331e-12 4.02407366375852e-17 7.39075694555371e-14 1.32437656877855e-10 6.86128676857315e-28 2.15597640598156e-09 7.17047213062201e-05 1.05998777236026e-05 3.34245677759662e-05 4.68059194494822e-07 2.59895476924836e-06 5.9294324762568e-14 3.95165750551954e-17 0.0124115451751509 0.0015698371834339 0.00912973684702188 5.30565803595995e-08 5.39198982594348e-10 1.57899698802315e-07 0.00218747245796112 0.00628219292439331 0.00462023984112369 1.13363540916333e-10 7.46717599808729e-11 2.29622595848308e-10 0.000760864351871432 0.000683331258928831 0.000934985112205243 NM_001103224.1 ANXA6 Bos taurus annexin A6 (ANXA6), mRNA. 0.0 4406 99.27 0.760185185185185 NM_001155.4 ANXA6 Homo sapiens annexin A6 (ANXA6), transcript variant 1, mRNA. 0.0 3344 86.09 0.874074074074074 TCONS_00217474_5 sp|P79134|ANXA6_BOVIN ANXA6_BOVIN Annexin A6; 0.0 1364 99.11 0.998500749625187 1 coding 0 0 0 0 -0.080874629855438 0.596868574602617 -0.0306706264420636 0.563473395353057 CTGCAGCTGCTACAGCTCTGCTAACGGGCTCTGACCCAGCGAGCTCCGCGTCCGCGTGTCGGTCTGCCCTTCTGTCCGTCCGCTACGGGAGGCTTCCGCCGCGGGTGTTTTCTGCTGCAGAACCTGAGACCATGGCCAAACCAGCACAGGGTGCCAAGTACCGGGGCTCCATTCGTGACTTCCCCGACTTCAACCCCAGCCAGGATGCCGAGACTCTGTACAATGCCATGAAGGGCTTTGGCAGTGACAAGGAGGCCATCCTGGAGTTGATTACTTCCCGGAGCAACAGGCAGAGGCAGGAGATCTGCCAGAACTACAAGTCCCTCTATGGCAAGGACCTCATTGCAGACTTGAAGTATGAGTTGACAGGGAAGTTTGAACGCCTGATTGTGGGTCTTATGAGGCCACCTGCCTATGCTGATGCCAAAGAAATTAAAGATGCCATCTCGGGCATTGGGACCGATGAGAAGTGCCTCATTGAGATCTTGGCTTCTCGGACCAACGAGCAGATCCACCAGCTGGTGGCAGCATACAAAGATGCCTACGAGCGAGACCTGGAGGCTGACATCACTGGGGACACCTCTGGCCACTTCCGGAAGATGCTCGTGGTCCTGCTGCAGGGTACCAGGGAGGAGGATGACGTAGTGAGCGAGGACTTGGTGCAGCAGGACGTCCAGGACCTGTATGAGGCAGGGGAACTGAAATGGGGAACAGATGAAGCCCAGTTCATTTACATTTTGGGAAATCGCAGCAAGCAGCATCTCCGGTTGGTATTTGATGAGTATCTGAAGACCACGGGGAAGCCGATTGAAGCCAGCATCCGAGGGGAGCTGTCCGGGGACTTTGAGAAGCTGATGCTGGCTGTGGTGAAGTGTATCCGGAGCACCGCAGAGTATTTTGCTGAGAGGCTATTCAAGGCCATGAAGGGCCTGGGGACGCGGGACAACACCCTGATCCGCATCATGGTCTCCCGCAGTGAGCTGGACATGCTCGACATCCGGGAGATATTCCGGACCAAGTACGAGAAGTCCCTGTACAGTATGATCAAGAACGATACCTCTGGCGAATACAAGAAGACTCTGCTGAAGCTGTGTGGGGGAGATGATGATGCTGCTGGCCAGTTCTTCCCGGAGGCAGCGCAGGTGGCCTATCAGATGTGGGAACTTAGTGCAGTGGCCCGAGTAGAGCTGAAAGGAACCGTGCGCCCAGCTGGTGACTTCAACCCTGATGCAGACGCCAAAGCCTTGCGGAAAGCCATGAAGGGGCTTGGAACTGACGAGGACACCATCATCGACATCATCGCCCACCGCAGCAACGCCCAGCGGCAGCAGATCCGCCAGACCTTCAAGTCTCACTTTGGCCGGGACTTGATGGCTGACCTGAAGTCTGAGCTCTCCGGAGACCTGGCAAGGCTCATTCTGGGGCTCATGATGCCACCGGCCCATTATGATGCCAAGCAGTTGAAGAAAGCCATGGAGGGAGCTGGCACAGATGAAAAGGCTCTCATCGAGATCCTGGCCACTCGGACCAACGCCGAAATCCAGGCCATCAATAAGGCCTACAAGGAGGACTATCACAAGTCCCTGGAGGATGCTCTGAGCTCAGACACGTCTGGCCACTTCAAGAGGATCCTCATCTCTCTGGCCACGGGGAACCGTGAAGAGGGAGGAGAAGATCGGGAACGGGCCCGGGAAGATGCCCAGGAAATAGCAGACACAACCAGCGGAGACAAGTCTTCCCTGGAGACACGATTCATGATGATCCTCTGCACGCGGAGCTATCCGCACCTCCGGAGAGTCTTCCAGGAGTTCATCAAGATGACCAACTATGACGTGGAGCACACCATCAAGAAGGAGATGTCTGGGGATGTCCGAGACGTGTTTGTGGCCATTGTTCAAAGTGTCAAGAACAAGCCTCTCTTCTTTGCTGACAAACTTTACAAATCCATGAAGGGTGCCGGCACGGATGAGAAGACCCTCACCAGGATCATGGTCTCACGAAGTGAGATCGACCTGCTCAACATCCGGCGGGAGTTCATCGAGAAATATGACAAGTCTCTCCACCAAGCCATTGAGGGTGACACCTCCGGGCACTTCCTGAAGGCCTTGCTGGCCATCTGTGGAGGCGAGGACTGAGGCCACTGGTGCTCACGGGCACCTCTGCTGAGAGATGGTCAGCGGCACCACCTGCCACGACCCAGCCTGATGCTCCAGCTTCAGAGACTAAAGAAGGGACAGGGTGGGGGGAGGGGTCAGGGTGGGCGCTTGTCTTCAGCTGGGGTTTAGGGGAAACTCCCACTCCCATGAGCCACTGAGGGCCCGGCACGGTCACCCCTGCTCACGTCTGAGCGGCCGAAGAACCGGAGCCATTGATCCCGTCCACCTCCACTCCCCATCCTCCTCCTCCTCACGCCTTCCCAGCTTCCATCTCTTGTCACAGCCCCTGCCCTGGTCTGGGCTTTATTGAAGCCAAAAACATACTGAGCCTCTGTCTGTGAAGTGAGTGATGTGTGTGTGCTTTTATGGTGGGGTGTGGTGGCAGGTGCCAGTTCTGGGGGGCGGGAGAGAGGAGGAAATGTGCTGAGCCAGCTGGCAGTCCTCCCACTGTTTCACTGCCACCTCATCCCGATTGTGGTGCTAGAGCACTGAGCCAGGAGCCCGGAGACCTGCGTGCAAGTTTGCACCTGCCACACACCTGTTTTGTGACCTTACACCAGTCTCTTTCCCTCCCCGAGTCTCTATTTTCTTATCCACAAAATATGGGTTCGACAAAAAGATCTTGGCTTATTCTTCTAACATTGACATTCTAGGATGTGCCTCCAAATCGTTCCCTTTCCATTTCTCTCTTTAAATAAACAGACACATACAGGCGCATAATCGCATTTCCAAGGGGGGTCTGTGATTTTGATGTAGAACCTGCAGCCTGAGTTGTCGCCATTAGAGCCAAGGTGTTAAGCTACCCAGGAGTGGCTTCTGTCTTCCCACCCCAAATGAGGGTCAGAGCTTGGGTCCAGACTGGGAAGGCTGGCCCAGCTGGCTCTAGGTTTCAGGTCCCTTCTCTCCCCTCTGCTGCCTGGATGTTTCTCTGTGAGATCTTCATCTGTTAACCTCTGAGCCCAGACTTCCTCTTTTGAACTCTTCGGGGGCACCAGATGTGATCGTGATCTGGGGAGGCCTGTGGAAAGCTTCCTCTTTGTGAAGATCAGTGATGAACAGGTCAGCTGCACTTTCTCTATCTCCC EMBV3_31706 GTCTTCTAGTCTGTAATGGAAATTGTATATTTTGATAGAAGTTTTTTCTCCATTGGTTAC Gene GeneID:100139547|CDC73:XM_002693926:20_cdna Constitutive 0 NULL GeneID:100139547 16 GENE CDC73 NULL cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) EMBV3_21790 CAACAGCCTATGGAGTGAAACTCTGCGGCCGTGAATTCATCCGAGCGGTCATCTTCACCT Gene GeneID:100300034|LOC100300034:XM_002688750:102_cdna Constitutive 0 NULL GeneID:100300034 7 GENE LOC100300034 NULL hypothetical LOC100300034 EMBV3_28286 TGGAGAGAGACAAAGAGAAGCCTTGAGAGATAGCGTCAGAAAGTCAGCGATAGAGCTGGG Gene BVV0102_121783 + 0 NULL GK000005.2:25827511-25838390 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198071 1 XLOC_119728 NonCoding TCONS_00198071 XLOC_119728 NonCoding NonCoding - 5:25830862-25831129 - TSS147639 267 1 0 5.09576478202662e-05 0.000150538333456896 3.46590862508872e-05 0 0 0 4.36832595353505e-05 0 0 0 0 0 0 0 0 0 0 0 0 0.000269342229201176 0 0 0 0 0.00225759407293348 0 0.000131666332837018 0 0.000145456410959224 0 0 noncoding CGGTCTCTCTTTTTTTTCTTTATCTCTGTCAGTCTCCCGCCGGAGCCCCAGCTCTATCGCTGACTTTCTGACGCTATCTCGCAAGGCTTCTCTTTGTCTCTCTCCATCTGTCCGTCTCTCCTCTACGCTGTCTTCAGCGCTTGTACCTCCGTTATCGCCCTTTTTTCTCCGCAGCTCTTTCTCTCGCGCCTGCACCCCGCCCGCTCTCCCCCGCCCCCTCCCCTATCCCCCGCCCCTGCAGCTCTCGCTCGTACGCACACTCTCTCT TCONS_00191135 TCONS_00191134 . 3' 3295 TCONS_00191135 TCONS_00191134 . 3' 3561 EMBV3_07577 GGAGGCCGATGGTCCTTTGATGACGTACCGATGAAGCCCCTGCGAACTGTGATGTTAATT Gene GeneID:512466|BCCIP:NM_001046122:33_cdna Constitutive 3 NULL GeneID:512466 26 GENE BCCIP MGC134343 BRCA2 and CDKN1A interacting protein EMBV3_15696 GCGCCCCAGGCGAGCCGAGACAGCCGTTTTAACTCTGTAATTTTTATCTTCTCAGGTGGT Gene BVV0102_127381 + 0 NULL GK000022.2:23703906-25053484 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126505 TCONS_00126506 1 XLOC_077450 Coding TCONS_00126505 XLOC_077450 Coding Coding - 22:24499747-24501209 - TSS94851 596 1 TCONS_00126505_1 86 0.130872483221477 2 0.593429158110883 0 0 0 0 0 0 0 0 0 1.20800372678937e-08 5.8473955638012e-09 1.20636944837802e-08 0 0 0 0.00247948560551548 0.0013412586086851 0.000800137081504336 0 0 0 0.000485576332085095 0.000332960996388424 0.00278804372849409 0 2.61389259582706e-08 1.74941666320773e-08 0.000572092308818279 0.000163915853157661 0.00168463449759851 NM_001075822.1 ETFA Bos taurus electron-transfer-flavoprotein, alpha polypeptide (ETFA), mRNA. 4e-79 298 97.71 0.291946308724832 NM_000126.3 ETFA Homo sapiens electron-transfer-flavoprotein, alpha polypeptide (ETFA), transcript variant 1, mRNA. 7e-13 78.8 92.45 0.087248322147651 0 coding 0 0 0 0 0.0343958006671077 0.751268308400565 -0.0231040512415703 0.643553107971317 TAGGTTGATACAGAGCCCCTGTTTGAATTTCCTGAGCCATACAGCAAATTCCTGTTGGCTATCATTTTACATATGGTAAGCAATGAGGTCGCCCGCCGGAGCTGCCCAGGAGCCGCGGCTCGGAACATAGTGCCTGCACCTATTCGCCTCAAGGCAGCCGAGAGCAGACCCAACTGCAAATGCTCCGCGAGTCACCGTAACGCTCGCGAGACGCGGGAACGAGAGCAGGCGCCCCAGGCGAGCCGAGACAGCCGTTTTAACTCTGTAATTTTTATCTTCTCAGGTGGTCAATCTGTGTTTTCCTGCAAGGAAGCTTATAATGTCTTGGTTTGATTGGCAGGTCTCTTTTCTTCAAAATTACCTGGGCTATTTTTGTCCCTTTATAATTTTATATAAATGTACCATTTCATGAAAAAATTATTGTCATTTTAACTGGTATTTTCTTGATCTATGGTTTAATTTAGGCATATTGAATGTTAAGATCAGTGAAGATGTTATATCACAATTTTTATTGGTTTTCTTTAAAGTCTTTAAGAAAACATTTTATGATTTTCTCCTCACATTTTCTGGTAATTAAAAACAATTAGTAACCTGGG TCONS_00126504 s 3' 167377 TCONS_00126504 s 3' 167377 EMBV3_14318 TGAGCTCCGTAGTGAGATGGAGTGCCAGAACCAGGAGTACAAGATGCTGCTGGACATCAA Gene GeneID:507464|KRT13:NM_001130747:79_cdna Constitutive 0 NULL GeneID:507464 19 GENE KRT13 KRT15 keratin 13 EMBV3_25446 ACACAGTGCCCGCCAGAAGTATGTCCGGAAAGCCTGGGAGAAGGCAGATATCAATGCAAA Gene GeneID:539373|RPL14:NM_001034674:187_cdna Constitutive 1 NULL GeneID:539373 22 GENE RPL14 MGC127119 ribosomal protein L14 EMBV3_31332 CGCCCGGAACAGGCTTCTGCAGGGCTTGAGCCAAGGCCGCCGCGATGCCGCACTTCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04450 TCAAGTGAAGCAAAAGCCTTCCATGATTACCCTTTTATGTCACCTCGATACCCTGGAGGT Variant GeneID:616564|SSBP2:NM_001035478:11_cdna 325^414 2 EMBV3_06379 GeneID:616564 7 GENE SSBP2 MGC129033 single-stranded DNA binding protein 2 EMBV3_12381 GGTTTGATTTGGGACCCAAGATGTGGTCTATCCTGGAGAATGTTCCATGTGCACTTGAGA Gene BVV0101_049910 - 1 EMBV3_21561 GK000030.2:143387644-143414329 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00255180 TCONS_00064131 TCONS_00197118 TCONS_00110709 TCONS_00089664 TCONS_00056852 TCONS_00238555 TCONS_00200093 TCONS_00175170 TCONS_00148299 TCONS_00039848 TCONS_00030151 TCONS_00125060 TCONS_00098305 TCONS_00240900 TCONS_00047307 TCONS_00150015 TCONS_00091705 TCONS_00198315 TCONS_00234388 TCONS_00188671 21 XLOC_158112 XLOC_038857 XLOC_118781 XLOC_066611 XLOC_054447 XLOC_034655 XLOC_145222 XLOC_121745 XLOC_104953 XLOC_090181 XLOC_023665 XLOC_016406 XLOC_076602 XLOC_058551 XLOC_147564 XLOC_027443 XLOC_091796 XLOC_056478 XLOC_119970 XLOC_143866 XLOC_114712 Coding TCONS_00150015 XLOC_091796 Coding Coding - 26:11532247-11538792 - TSS112494 4178 1 TCONS_00150015_12 124 0.804451890856869 2 0.361858190709046 0.00219104243493564 0.00239427836847623 0.00133228330166534 0.00108337864064317 0.00191634899179236 0.000599557657688176 0.000422547098469683 0.000972850273330613 0.00268063347121649 0.00045951830552785 0.000209851295959926 0.000276757690138394 0.000146966585080107 0.00257225408342361 0.00223750057224574 2.52863210193486e-05 9.93435840833436e-07 0 0.000194377467486132 0.00121598844531343 0.000449104245415371 1.7761303169157e-07 1.97621878965974e-05 8.02520154466831e-06 0.000963712857351226 0.00152854017732444 0.00180612813561353 7.12686678386746e-05 4.76397700842662e-05 0.000115121990512847 NM_001191412.1 RPL21 Bos taurus ribosomal protein L21 (RPL21), mRNA. 0.0 951 91.78 0.159406414552417 NM_000982.3 RPL21 Homo sapiens ribosomal protein L21 (RPL21), mRNA. 0.0 677 88.13 0.128291048348492 TCONS_00150015_12 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-37 136 52.46 0.975806451612903 0 noncoding CTGGTTTCCCTGGTAACTAATGAGCCCACCTGACATCAATTCCACTATAACTGGTAACTTCCCTCCCCTCTTCCCCTGGCGAAGACTGCCACCACATTCTGCCGCTTTCTGCAGCACACTATGAAGTGTCGCTCCAGGACCTTTCTTCAGATGTGCTCTGTGAAATACGTTGCAAGGTATATCTGTCTGCAACAGGACAGTCTGAACATTGCTTGCCATTCAGTGCTCACGAAAGGAAAGTATTAAGACTGAGGAGAGTCAAGATTATGTAATTTTTTCAAATTGAAGATTTGTGACAATCTTGAATCAACCAAGTTCATTGATACCATTTTTTCAAACACCATTTGCTCACCTTGTGTCTCTGTGTCTCATTTTGAGGTTAAGCCCTGAGCCTTTGGAGTGGGAGCACTGACTCCAAGACCCTGGACTACCAGAGAACTAACTCTAGGGAGTATCACATATTGAGAACTCACACAAAGGAAACCACTTGAATACAAGACCCGGCATCACCCAACCACCAGGAGCACCCTGTACAGGAAGCCTCATCTAAACAACAAACAAAACAAAAATACAAACCCAGCAGACAGGATTACCACCTCACTCAGCCTTGCCCATCAGAGGGAAAACAAACAAACAAACAAACAAACAAAAACAACACAAATCGCACCCTATATGAAGCTTACACAAACCACTGGACCAGCCTTAGGAGGGCAGAAACCAAAAGGAAGAAAGAATTCAACCTTCAAGGCTGGCAAAAAGAGACCTCAAACACAATAAGGTAAAAAAAAATAATGAAAAGGCAGAGAAATACTACACAAATGAAGGAACAAATTAAAAACACAGAAGATCAAATAAATGAAGAGGGAATAGGCAAACTACCTGAAAACTAATTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAAATGCAAGAATCAATTAACAAAGACCTAGAAGAATTAGAGAATAGACAGTGGGTGATGTGTTTTCAAATCTAGTGTTTCTTCTTCCTGAAAGATGTAAGATAGTTTGTTATTCAGTATGTTCCATTGGTTAATAAACTGCCAGATATTGCCAAAATAAAATTACTACAATTACTACAATTAAAAATACTCTAGAAGAGATCAATAGCAGAATATCTGAAGCTGAAGAGTGAATCAGTGAGCTGGAAGTTAAAATGATGGAAATAACTTCTGAAGAGCAGAATAAAGTATAAAGAATGGAAAGAACTGAGGATAGTCTCAGAGACCGATGGGACAATATCAAAGGCACCAACTTTCGAATTATATGGGTCCCAGAAGAAGAAGAGAGAAAGGAAGGGTATGAGAAAATTTTTGAAGAGATTATAGTTGAAAATTTCCCCAACATGGAAAAGGAAATAGTCAATCAAGTCCAAGAGGTGCAAAGAGTTCCATACAGGATAACCCAAGGAGAAACACACCAAGACACATATTAATCAAACTAACAAAGACTAAACACAAGGAAGGAATATTAAAAGCAGCAAGGGAGCCTGTCGGCTGGAACCACCATCTTCCAGTAATTTGCCAAAATGACCAACACAAAGGAAAAGAGGAGGGGCACCTGCTGCATGTTCTCTAGGCCTTTCAAAAACATGGAGTTGTTCCTTTGGCCACATCTATGCAAATCTACAAGAAGGGTGATATTGTAGATATCAAGGGCATGGGTACTGTTCAAAAAGGAATGCCCCACAAATGTTGCCATGGCAAAACTTGGAGAGTCTACATTGTCACCTAGCATGCTGCTGGCATCACTGTAAACAAACAAGTTAATGGCAAGATTCTTGCCAAGAGAATTAATGTGCCTATTGAACATATTAAGCACTCTAAGAGCCTAGATAGCTTCCTGAAACATGTGAAGGAAAATGATCAGAAAAAGAAGGAAGCCAAAGAGAAAGGGATTTGGGTTCAGCTGAAGCACCAGCCTGCTCCACCCAGAGAACACACTTCATGAGGACCAGTGGAAAGGAACCTGAACTGTTGGAGCCCATTCCCTATGAATGTAGGGCCTGTTGGGTGTAAGAATAAAGACCTGGACTGTACAAATGTTTCTCTTAATTGAGTAGAGATGTTGTGTCTAAATTCAGTGGGTGATGTGTTTTCAAATCTAGTGTTTCTTCTTCCTGAAAGATGTAAGATAGTTTGTTATTCAGTATGTTCCATTGGTTAATAAACTGCCAGATATTGCCAAAATAAAAAAAATAAATTGCCAAAAAAACCAGCAAGGGAAAAGCAACAAGTAATATACAGGGAAACCCCATGCATTTAATAGCTGATGTTTCAGCAGAAACTCTGCAGGCCAGAAGGGAATGGAAGGATATATTTAAAGTACTGAAAGGGAAAAATCTACAACCAAGATTACTGTACCCAGCAAGGATCTCATTCAAAATTGATGGAGAGAGAAAAAGCTTTTCAGACAAGCAAAAGTTAAGAGAATTCAGTGCCACCAAACCAGCTTTACAATAAATGTTAAAGGGACTTATATAGTCAAGAAATACAAGAGGAAAAAAACATCTACCAAATCAACCCCAAACAATTAAGAAAATGGCAATAGGAACATATATCAATAATTACTTTAAATGTAAGTGGATTAAATGCCCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAAACCCACTTCAGACCTAAAGACACATATAAACTGAAAGTGAGAGGATGGAAAAATGTATTTCATGCAAATGGGAAGCAAAAGCTGGAGTAGCAATCCTCATATCAGACAAAACAGACCTTAAAATAAAGATTGAAAGAGATAAGGAAGGACACTATGTAATGATCGAGGATCAATCCAAGAGGAAGACGTAACAATTGTAAATATCTATGCACCCAACGTAGGAGCACCTCAATACATGACAAACACTAACAGACATAAAAGGAGAAATTGACAGGAACACAATAATAGCAGGAGACTTTAACACCCCACTCACACCAATGGACAGATCATCATAACAGAAAATTAATAGGGAAACACAAGTCTTAAATGATACATTAGATGAGATGACTCTCATTGATATCTTCAGGACATTCCATCCAAATGCAGAAGAATACACCTTCTTCTCAAGTGCGCATGGAACATTCTCCAGGATAGACCACATCTTGGGTCACAAATCAAACCTCAGTAAATTTAAGAAAATTGAAATTGTATCAAGCATCTTCTCTGACCACAATGCCATGAGACTAGATATCAATTACAAGAAAAAAACTGTAAGAAACACAAACACATGGAGAGTAAACAATGTATTTCTAAACAACCAACAGCTTACTGAAGAAATCAAAAGTGAAATCAAAAATTTTCTAGAAACAAATGACAATGAAAACATGACAACTCAAAACCTATGGAATGCAGCAAAAGCAGTTCTAAAGGAGAGTTGATAGCAATACAATCCTACCTCAAGAAACAAGAAAAACATTGAATAGACCACCTAAATTTACACCTAAAACAACTGTAAAAAGAACAAAAAACCCCCAAAATTAGTAGATGGAAAGAAATCATAAAGATCTGAGCAGAAATAAATGAAAAAGAAACAAAACAATAGTAAAGACTAATAAAACTAAAAGCTGATTCTTTGAGAAGATAAACAAAATTGACAAACCTTTAGCCAGACTGATCAAGAAAAAAAGAAGAATCAAATCAACAAAATTAGAAATGAAAAAGGAGAGGTTACAACAGACAATGCAGAAATACAAAGGATTATAAAAGACTATTATGAACAACTATATGGCAATAAAATAGATAACCACAGATTCTTAGAAAAGTTCAATCTTTCAAGACTGAACCAGGAAGAAATAGAAAGTATAAACAACCCAATTACAAGCACTGAAATTGAACCTGTGTTCAAAAATCTCCCCAAAAACAAAACCCAAGGACCAGATGGCTTCACAGGAGAATTCTATTAAACATTTAGAGAGGGGCGAATGCCTATCCTTCTAAAACTCTTTCAAAAAACTGCAGAGGAAGGAAAACTTCCAAACTCATTCTATGAGGCCACCATCACCCTGATACCAAAATCAGACAAAGACAACACAAAAAAAGAAAACTACAGGCCTATCACTGACGAACTATCACTGATGAACATAGATGCAAAAATC TCONS_00149999 TCONS_00150000 TCONS_00150001 TCONS_00150002 TCONS_00150003 TCONS_00150004 TCONS_00150005 TCONS_00150006 TCONS_00150007 TCONS_00150008 TCONS_00150009 TCONS_00150010 TCONS_00150011 s 3' 64536 TCONS_00149999 TCONS_00150000 TCONS_00150001 TCONS_00150002 TCONS_00150003 TCONS_00150004 TCONS_00150005 TCONS_00150006 TCONS_00150007 TCONS_00150008 TCONS_00150009 TCONS_00150010 TCONS_00150011 s 3' 64536 EMBV3_00612 GGTGGCCCTCCATCCACTGACACCATTTCTCTCACAATCCAAAGGGATTAAACATGGCCA Gene BVT0101_029107 + 0 NULL GK000016.2:40061832-40118744 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067187 TCONS_00067192 TCONS_00067190 TCONS_00067185 TCONS_00067194 TCONS_00067183 TCONS_00067191 1 XLOC_041379 Coding TCONS_00067185 XLOC_041379 NonCoding Coding - 16:40065860-40107032 - TSS50585 1751 3 TCONS_00067185_2 62 3 0.957542930703651 0.00201311578866466 0.00152672843505751 0.00179707063265308 0.00193004133081739 0.00160356609338425 0.000860729207073587 0.000975156792200092 0.00102563688536937 0.00229365764713821 6.327013995646e-05 3.82870275240849e-06 1.60966053109909e-26 0.000168359116138095 0.000159436956733542 0.000341475385524913 0 0 0 0.00252454171642289 0.000830397304646816 0.000836477645177945 0 0 0 0.00162076455535592 0.00245116958438993 0.00181297815978118 1.41904711663424e-88 1.29985126382561e-122 0 0 noncoding 0 0 0 1 0.0752891870094649 0.877419904688675 0.0296862221896951 0.556671837932014 AAGGCAGTAAAGCCAAATCAGTGTGATGTGAGAAATGCTTGGCTGGTTTTGAAGATGGAAGGAACTCAGAAAGCCTCTAGAAGCTGGAAAAGGGAGAAGAAGCAGATAATACAAGAGCCCTCAGCCAACAAGACTAGACTTAATTGTCCCTCAATTCTCTAACCAATTGCCCTAAAAGAGACTTCTCTGATTTTCTTCTTCTGTTTGGATCAAGACATCTGGATAGGACAGAAGAATCTTTGAAGAGCCCACCTCAATTGCATGAAAGACTTGGCAATGGGAAACTTTTCCCTTCTATGGCCATGTTTAATCCCTTTGGATTGTGAGAGAAATGGTGTCAGTGGATGGAGGGCCACCACCAACACTACAGCCAGATCCTTCTCCAGTGAGCCACTGCTGAAGACTGATTTTAAAAAGAAAAGGAAGAAAGAAAAAATTTTATTAGGATAGATGATAAATGTCTCATCTGAAACATATGCATGCTCATTCACAGAAAACGCAATTGTTTTCTTGCTGCTTCCATGGCCTCCTTGGTGGAGCTGTCATTTTGCAGATGTCAATGGCATGAAGGGTCCCAGTGTGTGTGTGTGTATGTGTGACAAATTCCTGTCCTGCAGCAGAATATAAGTAGAGCATGCCCTAATGGAATCAGAGGCATTGCACACTGAGGTTGGGATTCAGTCTTCCCAGTTGAAAATTTTCAGAATATATTTCTTCAGCAATAAGGTTCAGCTCTGAGACCTCAAAGTATTGACTTCTCACAATGAATTGTTCTTTGAAAGCATGGATACAGGACTAATTCTTAGATCTGCAAATATTTTTTGAAGACAAGTGACGATGCTAGCTGGAGGAGGGTCTTCAGGCTGAGAGAAACAGGGTTGAGTGGAATTCCTTCTTGAATGGTCATTACAGAAACTATAAAAGAAGCCTCCACAGAGAGTGGGAATTTCTGAAGATCTTTGGTTTCAGAGATACCGTGTTTGCCTACTTTTGACTGAGACTCTGAAAATTCTCAGTCTCACACAAAAATATCCTTGTGTCATTGGCTATCTTGATTCTACTTTAAGCCCTTTTCAGCTCTACATGGAGAACAACAAAAGCTGTAAAGCAATTAAACTTAGTTGTAATTTCTACATCAAGGTCAATCTTGGCCCATTTTTGCAGTCAAACTTGCTGCTTCCTGGATGTTCTTATCTATTTGTGAAAACTCATCTTGGTTTCCATTACTTCGTCATGCTTGATCTCTAGCAAAATGTTACTTTCCCCTACACTTCCCATTTGGTTATTTCTGGGCTCTTCCTAAAAGTGAACTCTTTCACAATTCTTATTTACCAGATGAAAGAATCCTGAAATTGAGACCCATGAATTAGTAAGATTCTTGAAGGTATTTTCTCATATAGATATTTTTTACATAAGTCATTTAAAAATTAGTTAATGAAAAGCCTTTTGGTAATTAATAAAACATATATATAATCCCTGTGTAGGTTTGGATAATTACAAGTAAAACATCTAATAGTGATTTGGTACTATGCAGTTTATAGACTATCTTAATGTTCATAATTTATTTGATTTCATAGAACAATAGTTCTATGAATTTAAAGGAATGGATATTAATATACCAATTTTACAATGAAATTAAGGGCAAGGAGGGTGGATAACATAACTAGTAGGAACTTGAATCCCCGTATGCTGACTTAAGTTTGTGGCAATTGAAATAATTTATGTAAAGATAAAAGCTGTTCTTGTTCACA TCONS_00067199 TCONS_00067194 s 5' 0 TCONS_00067199 TCONS_00067194 s 5' 0 EMBV3_25580 CCCTCCTTGTAACTTCATACCCAATGACCATTTGTTCCTCTCCGAATCAGCCCTTGCTCC Gene BVV0102_266312 + 0 NULL GK000004.2:92126900-92423261 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189393 1 XLOC_115432 NonCoding TCONS_00189393 XLOC_115432 NonCoding NonCoding - 4:92394290-92395241 - TSS141761 951 2 TCONS_00189393_1 78 0.438485804416404 1 0 0.000300441563617714 0.000100378658556822 6.81155915725895e-05 7.8588221672579e-05 0.000301111245154886 7.52273136486857e-06 0 0 0 0 4.81428748135167e-06 3.75991263969286e-06 1.50855962295581e-06 0 0.000211518285431366 0.000138861910392447 0.000331697743634296 0.000316604662153879 0.000640935059049679 6.80576808184514e-05 0.000995952968484327 0.000124848328982544 0.000279755598052024 0.00188624288516407 0.000473554727542766 0.00021484649067996 4.92883703234165e-05 4.04003629057855e-05 0.000158247150311516 0 XM_005223069.1 CCR9 PREDICTED: Bos taurus chemokine (C-C motif) receptor 9 (CCR9), 5e-17 93.3 85.06 0.0862250262881178 0 noncoding 0 0 0 0 -0.245325505976501 0.321389845040472 NA NA AACTCTGGGAGACAGTGAAGGACACAGAAGCCTGACATGCTGCAGTCCCTGGGGTCACAGAGAGTCAGACACGACCTGAATAACAACAACCACTTCTAGAAGCAGACACGGAGGCAGGGTTTAACTTAGAAGACTTTTATTGAGGGGACATCTGTGAAGCAAAGAGGGAAAGAATCAGGAGCAGGGCGCAGTCTTCATACCATAACGCAAGTCTGACACCTAGAAAAGGAGAGGGAGGTTGGGCAAGAAGAGCCTTAGGCTCATGTGGCACCGTTCTAAGAAAGTTTCAGTCAGGTTGCTGTGGAGTACGCAGACTGAAGTTGCTCGTTGGAGGAGTCTGGTATCTCACCCCGACTCCGACTCCGCTCAGTCACAGACTAAGCAGCCCAGGAGACGCACTAATCTCGGTGCAAACCCAGTAGAGGATGCCCTGGGATGGCAAATTAGAACCCGGGAGCAAGGGCTGATTCGGAGAGGAACAAATGGTCATTGGGTATGAAGTTACAAGGAGGGAACTGGAGGTTGGAATTCAAGTTTAACCACAGTATGGGTCACAAGACTCTGGACAGCGCGGGTCACCAGCCTGTGATGATGGGATTTGAGGTGAAGAAGATTAAAATGGGAACTAGGCTTTGAAGAACTAATGATGAAGGGAAATGACTAGGAACTCGACAAATTAGGAGGGAAGAGGATGGTACTCTCCGGTGGCAAGATTCTCAAAGAAGCCGGGATTATGGCAGACGGGATGAGGAAGTCCTCGCACCCGCCAGCCCTAAGGCACACGGTCCTCCTGAGGGGCTGCGTGGGACAGAGGTCGGTAAAGCGCGGGGTGACGGCAGGGCGCCGGCAGCTGAGGCCCCCGGGGAGATCGCCGACGCCCGAGTGGACTTGAGAGCTCCGGCGGGTGCGGCGGGAGGAGAGGCGCGACGGGCGAGGCCTGAGGTACTGGGC TCONS_00184828 . 3' 186 TCONS_00184828 . 3' 1136 EMBV3_25278 GGCCATGCCCAATGAGACGTTCTAAATCAGGACGAGTGGGAACCCTTATTTCCAAAGGAA Gene GeneID:534403|SP2:NM_001015654:138_cdna Constitutive 0 NULL GeneID:534403 19 GENE SP2 NULL Sp2 transcription factor EMBV3_16649 TGGAGCAACTAAGTCTGTGTGCCTCAACTACTGAGCCTGTGCTCTAGATACACTGTGCAG Gene BVV0102_055927 + 0 NULL GK000006.2:73997819-74016233 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17537 TTACCTGCAACTTTTTCTGGGTCTGTTTCCTTACGAAGCTTCTCTCTGGATGTGCCCCCG Gene BVV0102_049116 - 1 EMBV3_19261 GK000007.2:57242535-57253500 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24439 AAGTCAGAAACCTGCAGTTACTCACGCAAGCCTCAGCCGAGGGTTCTCCATAAATGCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20967 GATCCTTTGAAGGTCTTATGGGGACAATCAAGTCCAGAGTCACAGGTGGCAGAGAGCTTG Gene GeneID:767900|TPD52L3:XM_002689606:17_cdna Constitutive 0 NULL GeneID:767900 8 GENE TPD52L3 TRPD52L3 tumor protein D52-like 3 EMBV3_00401 TCCCTAAGGCATCTCTGGGAAAACCTAGAGCACAGACCCCAAACTTCCTTACATTGTGGG Gene GeneID:514216|TCF19:NM_001083684:117_cdna Constitutive 0 NULL GeneID:514216 23 GENE TCF19 MGC143310 transcription factor 19 EMBV3_23510 GTGGAGAAGCTGATGGCGGGGCAGGAAGACTCCAATGGCTGCATCAACTATGAAGCGTTT Gene GeneID:618352|MYL3:XM_002697091:193_cdna Constitutive 0 NULL GeneID:618352 22 GENE MYL3 NULL myosin, light chain 3, alkali; ventricular, skeletal, slow EMBV3_08910 GTCATTTCCTCCAGCTTTTGCCATTAATACACAGTGCCCTGGTGCGCATTCTCCCTAGAC Gene GeneID:767945|ZNF566:NM_001077017:787_cdna UTR3_Alt 2 NULL GeneID:767945 18 GENE ZNF566 MGC128759 ZNF420 zinc finger protein 566 EMBV3_10683 AAGCTGGTTGTTGACAGTGTATCAGCAGAATGCGTGTCCATCCTTTCATGGGTCTGCAGG Gene GeneID:100337465|LOC100337465:XM_002697258:475_cdna UTR3_Alt 2 NULL GeneID:100337465 23 GENE LOC100337465 NULL alanyl-tRNA synthetase 2, mitochondrial-like EMBV3_14271 GTGTCCCACACTGAGATGATGGAGTGTCTGGATATCTTGTTAGTTTAACTGGGCATGAGC Gene GeneID:534101|BMPER:NM_001077997:54_cdna UTR3_Alt 2 NULL GeneID:534101 4 GENE BMPER MGC142820 BMP binding endothelial regulator EMBV3_32983 TGTGTGACTGCGTTGGGCTGAATGGAAACACCTGGTTTGTGCTGTGTTATGACTGCATGC Gene GeneID:535402|FAM76A:NM_001015660:233_cdna Constitutive 1 NULL GeneID:535402 2 GENE FAM76A NULL family with sequence similarity 76, member A EMBV3_35292 TTTCCACCCAATTCGATTCAGTGCGGTTCAGGTCAGTCACATCAGCATAATCAGAGCGCG Gene GeneID:100336975|LOC100336975:XM_002697622:145_cdna Constitutive 0 NULL GeneID:100336975 23 GENE LOC100336975 NULL hypothetical protein LOC100336975 EMBV3_40094 GGCACTGCTCACCGAGCCTGCCGCTTCCAGGATTAAGGTAAAGAAGGGGCTGCACGTGAT Variant GeneID:540137|TMEM132A:NM_001102237:167_cdna 670^1001 1 EMBV3_07520 GeneID:540137 29 GENE TMEM132A MGC179422 transmembrane protein 132A EMBV3_33910 TGACCTGCTGCTCACAAGGAAGGCACACCACCAGGCCCCAAAATAGAGAGCCCACTTGTG Gene BVT0102_144024 + 0 NULL GK000008.2:39188275-39195273 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225038 TCONS_00225039 TCONS_00225030 TCONS_00225037 TCONS_00225029 TCONS_00225031 TCONS_00225036 TCONS_00225032 TCONS_00225028 TCONS_00225027 TCONS_00225035 1 XLOC_137673 Coding TCONS_00225035 XLOC_137673 Coding Coding ERMP1 8:39130841-39190957 = TSS168583 5814 1 TCONS_00225035_6 925 0.0349157206742346 16 0.903551526241371 0.00675003708355644 0.00507582091893618 0.00393794263596899 0.00427464812993412 0.00432676532984522 0.00137258886703579 0.00441846680143972 0.00322824710549695 0.00679202833009052 0.000920004304294784 0.00045676622709062 0.000269472395797821 0.00139441078186941 0.00107457625016844 0.00174392973333131 0.00225793422864012 0.000326034994230337 0.00128513601412314 0.00533877697571501 0.00507980786510441 0.00162851404578226 0.000795750157654351 0.00155549664686326 0.000599036686802267 0.00411255964146827 0.00553686613185444 0.00280523779897625 0.000326941789593044 0.000132869127525915 0.000571210886796907 XM_002689609.3 ERMP1 PREDICTED: Bos taurus endoplasmic reticulum metallopeptidase 1 (ERMP1), mRNA. 0.0 1.049e+04 100.00 0.999828001375989 NM_024896.2 ERMP1 Homo sapiens endoplasmic reticulum metallopeptidase 1 (ERMP1), 0.0 3961 88.36 0.536119711042312 TCONS_00225035_6 sp|Q7Z2K6|ERMP1_HUMAN ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1; 0.0 1654 90.55 0.96 2 coding 1 1 1 1 -0.966428907197216 0.212488428597181 -0.0460282775671991 0.449700696823201 ATGGAGGGAGGAATACCTTTTCTAAACCTTCCTTTCCAGAGTGCTATAAGCAATAGGCTGTTTTGGGAGCCGACTAAATTAGATCTAAGTCCTTCATCTGTTACCTGGGAGCGCCGGGACGGCCCGGCGGCCGCACAGCAACCGGAGAGGGAGGCCCTGGCGCCGGAGCCCCTGGCGGACGCGTGCGGCGGCGGCGCAAGGACGCGGAAGCGGAGCGGGGAGGGGAGCGGTGGCGGCGCGAGACGGGGCACGGGGACCGGACTGTCTGAGGCGCGCGCCGCGCTGGGGCTAGCGCTCTACCTGCTCGCGCTGCGGGCGCTTGTGCAGCTCTCGCTGCGGCAGCTCGTGCTCCGAGGGGCAGCTGTTGGCCACCAGGGAGAGTTCGACGCGCACCAAGCCAGGGATTATCTTGAACATATAACATCCATTGGCCCCAGGACTACAGGAAGTCCAGAAAATGAAATTCTGACAGTACATTACCTTTTGGAACAGATTAAACTGATTGAAGCTCAAAGCAACAGCCTTCACAAGATTTCAGTAGATGTACAACGGCCCACAGGCTCCTTTAGCATTGACTTCTTGGGAGGGTTTACAAGCTACTATGACAACATTACCAATGTTGTGGTAAAGCTGGAACCCAGAGATGGAGCCCAGCATGCTGTCCTGGCTAACTGTCATTTTGACTCAGTGGCGAACTCACCAGGTGCCAGCGATGACGCAGTTAGCTGTTCAGTGATGCTGGAAGTCCTTCGTGTCTTGTCGACATCTTCAGAAGCCTTACATCATGCGGTGATATTTCTCTTTAATGGTGCTGAGGAGAACGTCTTGCAAGCCAGTCATGGTTTTATTACCCAGCACCCCTGGGCCAGCCTAGTCCGTGCATTTATTAACTTGGAGGCAGCAGGTGTAGGAGGGAAAGAACTTGTATTCCAAACAGGTCCTGAAAATCCTTGGTTGGTCCAAGCTTATGTCTCAGCAGCTAAACACCCATTTGCTTCGGTGGTGGCTCAGGAGGTTTTCCAGAGTGGAATCATTCCTTCAGATACTGACTTCCGGATCTACAGGGATTTTGGGAACATTCCAGGAATAGACTTAGCTTTTATTGAGAATGGATACATTTATCACACCAAGTATGACACAGCGGACAGAATTCTAACAGATTCCATTCAGAGAGCAGGTGACAACATTTTAGCAGTTCTTAAATATCTAGCTACATCTGATATGTTGGCTTCTTCTTCTAAGTATCAACATGGAAACATGGTCTTCTTTGATGTGCTTGGCCTGTTTGTCATTGCCTACCCGTCTCGTGTTGGCTCAATAATTAACTATATGGTGGTAATGGCTGTTGTTTTATACCTGGGAAGGAAATTACTGCATCCCAAATATAAGACTGCTACCTACACAAAGGACTTCTTCTGTGGACTTGGCATCACTCTGATAAGCTGGTTTACCAGCTTGGTTACAGTTCTCATTATAGCAGTGTTCATCTCACTTATTGGACAGTCCCTCTCATGGTATAACCACTTCTATGTCTCCGTTTGTCTGTATGGAACTGCAGCTGTAGCCAAAATAATATTCATACATACCCTTGCAAAAAGATTTTATTATGTGAATGCCAGTGGCCAGTATCTGGGAGAAGTATTTTTTGATGTCTCGTTGTTTGTACACTGTGGGTTCCTTACAGCTCTCACTTACCGAGGGCTCTGCTCTGCATTTATTAGTGCTGTCTGGGTGGCATTCCCGTTGCTCACAAAGCTTTGCGTGCAAAAGGACTTGAAGCAGCATGGTGCTGGAGGAAAATATATTGCCTTTTACCTTTTGGGGATGTTTATTCCATATCTGTATGCACTGTACCTCATCTGGGCCGTATTTGAGATGTTTACCCCTATCCTTGGCAGGAGTGGTTCAGAAATTCCACCTGACGTTGTGCTGGCCTCTATTTTGGCTGGTTGTACCATAATTCTCTCATCCTATTTTATTAACTTCATCTACCTTGCCAAAAGCACAAAAAGAACAATGCTAAGTTTAACTTTGGTATGTACAGTTACATTCCTCCTTGTTTGCAGTGGAACTTTTTTCCCGTACAGCTCCAGCTCTGCCAGTCCAAAGCCAAAGAGAGTGTTTCTTCAGCATACAACTAGAACATTTCACGATCTGGATGGAAACGTAGCTAAACGGGACTCTGGAGTATGGATCAATGGATTTGATTATACCGGCATGTCTCACATAACACCTCACATTCCCGAGATCAACGATACCGTCCGAGCTGACTGTGAGGAGAACGCCCCGCTCTGCGGTTTCCCTTGGTACCTCCCTGTGCACTTCCTCATCAGGAAAAACTGGTATCTTCCTGCCCCAGAAGTTTCTCCAAGAGAACCTGCTCATTTCAGACTTGTATCCAAAGAACAGACACCCTGGGATTCCATAAAGCTGACCTTTGAAGCAACAGGACCAAGCCATATGTCATTCTATGTTCGAACCCACAAAGGGGCTACGCTTTCTCAGTGGTCTCTCGGCAACGGCACCCCAGTCACAAGTAAAGGAGGGGACTACTTTGTCTTTTATTCCCATGGACTCCAGGCCTCCACATGGCACTTCTGGATAGAAGTACAGGTCTTGGAAGAACAGCCTGAAGGAATGGTCACTGTGGCCATTGCTGCCCACTATTTTTCTGGGGAAGACAAGAGATCCTCCCAGCTGGATGCTCTGAGAGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGCACCTACAATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGTCCAGTGGGATACTCCATGTGGCACAGTTTCTCCTTATGTTGCATGGACGGTTGTATGTAAGTCAGTGAATTTTAACGAGCATATGTTCAAAGAGCTTTGTGGGCTAACACTCTTCAGGGCTGAGCATGATCTATAATGGTTATACTGTGGAGTAGAGTACATGGCCCTTTTGACACTTGAAAATACCAGTTTTCTGGCACTTAAGCACACGTGGGTACTACACACACATGTCATTTTATATGACCTTAAGAACAAAAGCCAGCAAACCACTTTTAACAGTTGAACGCTTAGGATCATGAACGATGCAGAAGGTACTGTAAATCCCTTGTTAATGAGACAAATGACATTTCCAGTTAAAGCCCAAGACCATTGTTTTTTGTGTTAGTAGATGGTAGGTAAAGTATCACAGGAGTTAATGATTGGTCACAAGAAATTGAGATGAAGACTGGCTTCTGAGGCCCCAGCCTGTGCTGGGAGCGGTGCTTCTCTGGGCAGTCTTTAGAGTGTGCTTGGAGGCTCTAAGGCCTTAGTACTCTGATGTGGAAACCTGTATTGAAGTGGCGGCTCCTGTCCTTCAGACATGTTCCATCATTGGGATGCTTTTCTGAGGTGGTTTTCAATACCTGTTTCCTTCTGGAATTTCCAGGCTCTTTTGGTTTAGAATACTGTTTGTGGAAGTACAGGACATTCCCTTCTCAGAGTCCTGAGTTGCCATGGTGGCTGTTCTTGGGGTGGGAGGAGAGTGGGAGTAGCTGGGCATTTTATATTGATTCTTAAAGAAATGAACAGAATATTGTTATCCAAGGTTAATCCTTCAGGGCATAATATTATTGATGCACTGGGTCCTTGTTTTCTAGCCAGCTGAACAGGTTAGTTTCTCAGTAACTTACTGTGGCTGGCAGAGCTGGCTTTCCTGAGACTCGAGGCTGTGGCTTGCTCTGGAGTGTCCTTCTAGCTGTTGGTGTTTAGGTCCTGCACAACATTAGCTCTAGGACTTAGAGGTGCTTTTCATGTTGAGGAAGACGGCTGTTGGCTCCAGCAGTGGAAGAGTTTGGTGAGAGCAATGCTCAATTCTGCTAGCTTTCTTTTTTCCCCATTAAAAATGTAAAAAGTTAGACAGTTTTTGTCTTTACCAAGTCTAGGCTAAAAAAACCCCCTTTTTTTTAAGCCATAGTGAAACAAACAAAACAGTGGCACTCGAATCTGCCTGAACAGAGAGCATAGTAGTGTGTGTCTTTGAAATTACTTCTTAAAGCTGCTTGTCCGATATATACAGTGTGCATTCTGAATCATGCTCCTCCTAGTTCCTTAAAAACCGAGCCTACACAGACAGCAGGGTTACAGCCAGAGCTGAACGGTAGGTACCATGCTGTCATATGCACGGACACTGGAACCAGTGCTTCTCCTGGACTTCGTAAGAGCCACAGAGTTGACCCTTGAACAACACAGGGATTAGGAGTGCTGACCTCTGCACCGTTGAAAATGTGCATCGTCACACCCCTGTATACAAGGTTTTGCATCTATCTGTGGATTCAACTATGGATCATGTAGTACTGTGATATCTGTTTAATGAAAAATCCCTGTATAATTGGACCTGTAACAGTTCAAACCATGTTGTCAAGGGTCAGCTGTATCACTAGTCTTAGATGATTCAAGTGACACACAGAGTTTGCACTGTTGATAGCTTTTATAGACTCACAATTGTGGAGAAAAATAGTATCTAAATGAATTTCAAAATACAGGCATATTTTCTGTTTCTGTGGTTAATCTGAAATAGATTACTGGAAATTATTTATAGGGAAAAGAAAAGCAAACTTCCAAATGTGGAGGAAGGGCATTACCTGAGTTCCCTGTGATTCCCATCTGCCTACCCCCTCCTTGGGAAGCATGTTATTAACTCCTTTTTGATAATAATCATGGTTTTCTTTTTGCCTTTTTTTTCCTGTGTGGACTATTTGCTCTTGTTTTGGTTTTCTTTGGCATTATAAAGCTCTAATGATGTAGAAGGTCAGTAACAAGATGCACATTAGACTCAGGGCATGCTTAGTATTCTGGGGCACTGCTTTAATGCCAAAAATGGTTAAATAATTGCACACAATACTTATGGCTCTTAATATGCACACCGTCAGATCAGCAGTCTGAAGAACTTGTTAGTTTTTGCACAGTACTGCACATTTGGGAGAAGTGTGAAGGATTGTGATTTTGAAGAAATTCTTAAAAATTTACCTAAGCATGACGGTTGCATGCAGTATTTGTTTCATACTTTAGCAGATGTACATAGGCCTGATCAGATTTCTAAACCGTCACCACCACTTAAGAAGCCAGTCTGCGGACTCAGGAAGCTGTAGGAAGAATGAATATGTCTGTCTGTTTCTTTTCACTGGTTTGCTAGGGATGAATTGTTGCCTTACAGTAATAAAAATACTAGTCAGTATCATTAACAGAGAAACAGACCATCATTGTTTATATTTTCCTGTAACCTCATCTGAAGAGTTATTTTAAATCCATAAAGCCTTTTAGAGCTTAAAAAAAAAAAAAAAAAAACTCCGCTGTTAGAAAGACCTAGTTGGCTCTTGTGGGTATAATTGCTATTTTAAAGGGTCATGTGAGCAAAGAACTCAGCATGGCTTTAACTGGAATCTGTTTTACTGTGGAATGAAATTGTGCATTTGAATTTCACAGAAATTAAATGTTGAGCCTACAGCCTATTTAGCAGTTTTATCATTACTGTTGGCAAAGAAAATCACTGAAGAGCTAATAAAGGATGTTCTTTCATTGGGGGATGGGGTGGGGGGAGAAAATACTATCTTTCAGCCACAGAGTGACCTGCTGCTCACAAGGAAGGCACACCACCAGGCCCCAAAATAGAGAGCCCACTTGTGAGCTCCATGCAAGTTACCTCCCTTTCCAAGTGAGTTCCCTCAGAACAGTTCAGTACAAGGTGAAGCAGCCAAATAACTTATGTTCTTAATAATACCTTGTCTTTTAGGGCCAATAAAGCCAAAATGC EMBV3_08158 ACTATGGGCCTCTTCTTTTCATGTATGTGCGACCTGGATCCACACAAGCAGATGACCAAG Gene GeneID:783812|LOC783812:XM_002684688:71_cdna Constitutive 0 NULL GeneID:783812 1 GENE LOC783812 NULL similar to olfactory receptor Olr1535 EMBV3_36983 AAACGAAGGTCTAGGTCACGATCTGGTTCTCGAAAGCGTAAGCACAGAAAGCGATCACGC Gene GeneID:100298738|LOC100298738:XM_002690355:16_cdna Constitutive 0 NULL GeneID:100298738 9 GENE LOC100298738 NULL similar to RNA binding motif protein 16 EMBV3_16769 AACTACACAGAATTCACACAGTTTCTTCAGGCAGCCGGAGGAAGTATCTCACACCAGGTT Variant GeneID:539494|SLC25A12:NM_001101194:31_cdna 525^671 1 EMBV3_07092 GeneID:539494 2 GENE SLC25A12 NULL solute carrier family 25 (mitochondrial carrier, Aralar), member 12 EMBV3_35636 AATATTCCAGGGGAGCAGGTGACAGAGGAGCATTTCACAGATGAGCAGGGCAACGTCATC Gene GeneID:353108|ANK1:XM_002698725:172_cdna Constitutive 0 NULL GeneID:353108 27 GENE ANK1 MGC155206 ankyrin 1, erythrocytic EMBV3_31924 CTACTTCAGGCTGTCAATTCTCATTGTTTCCCAGCATTCCTGGCTATTCCACCGGCACAG Gene GeneID:510568|XPO1:XM_002691374:244_cdna UTR3_Alt 2 NULL GeneID:510568 11 GENE XPO1 NULL exportin 1 (CRM1 homolog, yeast) EMBV3_41806 AGTGCAAGGCTAAAGTAGACCCAGCTCTTGGTGGTGGCTGCAGACTGTGTGGCTCTGTGG Variant GeneID:506049|ZCCHC9:NM_001101055:2_cdna 621^713 1 EMBV3_24234 GeneID:506049 7 GENE ZCCHC9 NULL zinc finger, CCHC domain containing 9 EMBV3_15968 CGCAGGTGCCCACCTTGCTCGCAGGTGCCCTTGCTGACCTGGGTGATGGCCTTCTCCCCG Gene GeneID:100139447|LOC100139447:XM_002688283:60_cdna Constitutive 0 NULL GeneID:100139447 6 GENE LOC100139447 NULL hypothetical protein LOC100139447 EMBV3_22740 AAGAGGGAGGTGACCAAGGAGGAGTATAAGGACATCCTGCGCAAGGCGGTGCAGAAGATT Gene GeneID:100126170|LOC100126170:NM_001109963:192_cdna Constitutive 1 NULL GeneID:100126170 29 GENE LOC100126170 MGC157123 hypothetical protein LOC100126170 EMBV3_13026 GCAGTTCCGAAGCCAGACCTTCAACAAACTGCCCCAGAAGACTGCCAAGCTCAACCTTCT Gene GeneID:508501|UBIAD1:XM_002694056:158_cdna Constitutive 0 NULL GeneID:508501 16 GENE UBIAD1 NULL UbiA prenyltransferase domain containing 1 EMBV3_27556 TATAAGCCCACCGACGAGCACAAGACCGACCTGGCCCGACGCCCGCGGCATCTGGCATAA Variant GeneID:516210|CKB:NM_001015613:247_cdna 370^671 1 EMBV3_11364 GeneID:516210 21 GENE CKB NULL creatine kinase, brain EMBV3_40412 CAGGACAGAATTTGTTTCTGGAGTCCTGTCTGTTTTGTTCCTCGGCTCATTCTTTGGTCC Gene BVV0102_252759 + 0 NULL GK000009.2:93439134-93666771 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35628 CATATCCAGGAATTGGAATCATTGTTGGGGCCTTTGTGGGGACCCTGATAGGTGTCATCA Gene GeneID:505937|VSIG1:NM_001045930:16_cdna UTR3_Alt 3 NULL GeneID:505937 X GENE VSIG1 MGC137313 V-set and immunoglobulin domain containing 1 EMBV3_06916 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:613752|LOC613752:XM_002690945:287_cdna Constitutive 0 NULL GeneID:613752 10 GENE LOC613752 NULL similar to histone cluster 1, H2bd EMBV3_06839 GGGAGATCCAGCTCAGCGTCGTGCAGACCGAAAAGAAGAAGAAAAGCTCAACCAGGAAAA Variant GeneID:540423|MPZL2:NM_001015673:122_cdna 678^825 4 EMBV3_13204 GeneID:540423 15 GENE MPZL2 EVA1 myelin protein zero-like 2 EMBV3_13154 CTCTTATGTCTTCTGCATTGGTAGGTGGGTTCTTTACCATCAGTGCCACCTGGGAAGCCA Gene BVV0102_083795 + 0 NULL GK000008.2:84748798-84801815 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219154 TCONS_00197089 2 XLOC_132473 XLOC_118753 NonCoding TCONS_00197089 XLOC_118753 NonCoding NonCoding - 5:6056328-6056981 - TSS146657 653 2 TCONS_00197089_2 49 0.398162327718224 1 0 0 0 0 0 0 0 0.000275361165746709 0 0 0 0 0 4.39399780020307e-06 0 0 0 0 0 0 0 0 0.000159095563677902 0 0 0 0 0.00041274300754246 0 0 0 XM_005221151.1 EXOC7 PREDICTED: Bos taurus exocyst complex component 7 (EXOC7), 4e-48 196 87.34 0.240428790199081 0 noncoding GGGTGAAGGTGGCAGTAAACAAAGCTGCGGAGGTGCCCCAGCTAGTGGACATCGCTCAGAGGGGAACGGAAGTGACATTCGTCAAGCATCGTGCTGGCCAGCTTACGGGCATCACTGGCTTTATTTTCACAGCAAGCCAGTATGGTGGACATTAACATGACTGGGGAAAGTCAGTTAGCTGGTGAGCATGTTTTGGGGTACAGTGGGAGGAGTTCAGATGTTTGGGGGTGGGAGTGGGGCTGGCAAGAGCCAAGCAAGACCTTAATTCTAAAGTGACTTGAGGAATTAGGCAAGGTGCCAAGAAGCACGGGAGCACAGCAAACAGCCAGAAACCACTGATCAGAACTGGTACGGCAGCACTGAATTGTATACATTACCACGTGGGAAGCTGCTATATCGCACAGGGAGGTCAGCCCGGGGCTCTGTGACAACCTGGAAGGGGGTTTGGGGGTGGTGGTGGGAGGGATACTCAAGAGGTAGGGGATATACTATACTTGGCTTCCCAGATGGCACTAGTGGTAAAGAACCCACCTGCCAATGCAGGAGACATAAGAGACTCAGGTTCAATCCCTGGGTCAGGAGGACCCTCCGGAAGAGGGCATGGCAATCCACTCCAGTATTCTGGCCTGGAGAATCCCATGGACAGAGGAGAC TCONS_00190781 TCONS_00190782 . 3' 20343 TCONS_00190781 TCONS_00190782 . 3' 20995 EMBV3_12486 CAAAGTTTTCAAGGAGGGTCTTGAGGAATTAACACACTATATACATACTGCCATACAAAG Gene BVT0102_095330 - 0 NULL GK000003.2:20465223-20519703 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15743 AGGTCAGTAATAAAGGGCTTCACCTCCAAACATCCTTTTAACTTCTGGTGCGAGCTCAGC Gene BVV0102_457384 + 0 NULL GK000003.2:32030446-32047398 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24253 CCAGCCTTGGTCAGGAAAGGGGACTCTACAGGCCTAGTCTCACCATCCCCATCAAATATA Gene BVT0102_366878 + 0 NULL GK000008.2:59728621-59732256 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25694 TCAAAGGAAAAAGACGTACTTCAAGATCACCCTTTACGGGAGGACCAAGGAGCTGACCCC Gene GeneID:526639|LCN2:XM_002691670:433_cdna Constitutive 0 NULL GeneID:526639 11 GENE LCN2 NULL lipocalin 2 EMBV3_32614 ATAAAGAGTGGAGCGGAAGCTAAGAAACTGTCCATCTGCTGCAAGGAAGTTTGTAGATGA Variant GeneID:614688|POLB:NM_001034764:97_cdna 336^469 3 EMBV3_12199 GeneID:614688 27 GENE POLB MGC128623 polymerase (DNA directed), beta EMBV3_37836 CCAGTCTGCGAGACGTGAAAAGTAATCAGGAAAGTGACTGCATGGCTAAGAAGAAAATGG Gene GeneID:538173|PGP:NM_001038172:249_cdna Constitutive 0 NULL GeneID:538173 25 GENE PGP MGC134478 phosphoglycolate phosphatase EMBV3_31256 AATGGTTATGGTGGGCCGGACTGCTATCAATGCCATTCTTTCTTCATACTTTCTAAATGA Variant GeneID:507430|NIPA2:NM_001034298:7_cdna 471^561 1 EMBV3_22809 GeneID:507430 2 GENE NIPA2 MGC128994 non imprinted in Prader-Willi/Angelman syndrome 2 EMBV3_32325 AGGGTAAGGCCCTAGAAGCTGCAGGCACCACTTGTTCTGAAAATCTTCCCCTTCAAAGTC Gene BVT0102_061891 + 0 NULL GK000023.2:31299498-31322594 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133157 1 XLOC_081037 NonCoding TCONS_00133157 XLOC_081037 NonCoding NonCoding - 23:31305516-31308425 - TSS99508 1179 0.336726039016115 2 0.59525447042641 0 0 0 0 0 0 0 0 0 0.00289820962709335 0.000642550093637457 0.000454800667009829 0.000231197404735352 7.97963584794347e-06 0.000528488176470485 0.000396376250139831 0.000249125817015115 0.000106384231059128 0 0 0 0.000390227838041681 0.00033988819524243 0.000127401247163684 0 0 0 0.000396942159563582 0.000383222445340703 0.00032072580561479 XR_232272.1 LOC101901971 PREDICTED: Bos taurus uncharacterized LOC101901971 (LOC101901971), 2e-16 91.5 82.47 0.0814249363867685 NR_040093.1 STARD4-AS1 Homo sapiens STARD4 antisense RNA 1 (STARD4-AS1), non-coding RNA. 3e-21 107 75.60 0.141645462256149 0 noncoding 0 0 0 0 0.0352308901822432 0.81623934358903 0.0723320396650328 0.203631168112078 GACACTAGCATCCAAGCCAGACCAGAGGGTTCTTGAGGCCGTTTGACCACCATCTTCTGCAGTTGGTTGGCCTTGCAGATAAAGTTGCTATTCCTTTCCCCAACACCTCATCTCTCTATGGATTGACCCATGTGCGACGAAAAGTAGGAGCTTGGACTTGATCACAAACTTCTGCGACGCCAGTCAGGGCCTTGCTACTAGAGGCCAGTGGGCGGGTGGCACAATTTTAGGGTAAGGCCCTAGAAGCTGCAGGCACCACTTGTTCTGAAAATCTTCCCCTTCAAAGTCCCCTGAAGTGGCCAGACGCTTGCAGCAAGGAATCCACAGACTTCTAGAAACTGAAGAACTCGATCATCCAGTAGTTGTGGCTGTATTTGGAATAAGGAAGTAATTAAAGTCAGATTGGTGTTCTTGAAAGAAGAGACATCCGGGAAGCGCATTCCCTGTTTCTGCCTTTGAGGACACAGCAAGAAGACAGCCCTTTATAAGCCCAGAAGAGAGTGCCCACCAGTAACTGAATCAGCTAGTGCCTTAATCTTATACTTCTCAGCCTCCAGAACTGCAAGAAAATAAATTTTTTTTAGTTTAAGCTACCCAATCTGTGGTATTTTGTTTTGGCAGCCCAAGTAGAGTAAGAAACCAGCAGGAAGCTATGCTCTTTTTAACCACCTTCCTTTGCAGTTGAAGTGTTAGGTCTAAGGAGTTAGGTTAGCTTGTGTTCTGGACCAAGCTCAGGGATGGTCTTGGCCTTGGAGATGTTTGCATGGGTCTTGGGTTCAGAAATTCACTTTTTAAGTAGGTTAACTCAATTTTAACAAGATAGCCCAATGGCCATAAGACTGAGGAAAGGCAATCTGTTCTAAGAAACACAAAAAATTGTTTATATACCAGAAATCCATTAAGGTAATTGACAACAGGACATATGACTTATTAATACCAGTAATATTTGTTCCTCTGTGTAGGACATCCCTTTATAGTTTTTATCATACCAGGAAACCAAAACATTAAGCAGAGGCTGCTGAGTGAGCAAAGGGAAATCAGGCTTTACAATAAGACTTAGGGTGTGATATCCACAACATGTGGTCTGTAAATGTTCAATGAGTGTTTTCTCTAGTAAATAAAATGTTCGTATGAATCAGAAACAGGATCTCGGTTCCCTTGATTTTAGTGGATAAATAC TCONS_00134892 TCONS_00134893 TCONS_00134894 r 3' 14170 TCONS_00134892 TCONS_00134893 TCONS_00134894 r 3' 17078 EMBV3_30530 GCTGAAGTTTCTAGCCCTTGCCTGTAGCTCTCTCGGAGTTACCATTGCCAAAACTCTCAA Gene GeneID:527583|ROPN1:NM_001075900:68_cdna Constitutive 0 NULL GeneID:527583 1 GENE ROPN1 MGC127741 ropporin, rhophilin associated protein 1 EMBV3_42616 TATTATCCAAGATACCCTGAGGAGACAAGAGCACAGCATGGCTACAGGTAGTTGGGAGGG Gene BVV0102_229440 + 1 EMBV3_12144 GK000018.2:45715964-45731749 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083374 TCONS_00083373 TCONS_00083376 1 XLOC_051245 Coding TCONS_00083373 XLOC_051245 Coding Coding ZNF181 18:45704340-45721278 j TSS62669 8645 1 TCONS_00083373_6 415 0.251012145748988 5 0.489874239829958 1.08464526558585e-06 0.000359402996223449 6.96845057678647e-05 0.000182228155008981 1.84264146785203e-08 3.24617234653226e-05 2.36330378741293e-05 5.48082066446743e-08 0.000153424685618487 3.89170011322867e-05 7.60072102292385e-07 9.51266731890689e-08 8.27511195402205e-13 1.17211450721242e-05 1.81039106259354e-06 5.17856501010945e-07 5.8745060973014e-10 0.000147715670069145 6.31327845481061e-05 0.000331523596334697 2.76459147430013e-05 3.34212914963492e-11 0.000140621052328225 3.25068410138919e-05 0.000307184659156364 0.000143709904408679 7.58155476196015e-05 5.01801114791753e-06 3.90929485072786e-05 1.8502125638636e-06 NM_001076549.1 ZNF181 Bos taurus zinc finger protein 181 (ZNF181), mRNA. 0.0 3469 99.95 0.222672064777328 NM_001029997.3 ZNF181 Homo sapiens zinc finger protein 181 (ZNF181), transcript variant 0.0 2006 82.86 0.223713128976287 TCONS_00083373_6 sp|Q2KI58|ZN181_BOVIN ZN181_BOVIN Zinc finger protein 181; 0.0 810 100.00 0.956626506024096 6 noncoding 0 0 0 0 -0.855449921830564 0.00220314559987921 -0.0640259938426421 0.286211925775862 ACGGGAAGATGCCACTTAACAGATTCAATCTGCTCAACAATCCCAAGCAGGAGAAAAGGCAAAGAATTTCATAAAAAGCATGAGAAAATTCTCTCGTGCTATTTATAATTAAAAGAAAACAGGTAAAATGAATTTAATTAAAAAAGAAAATAAAGGCAACAACCCAAGTTAATACCAAGAGTAGAATGCTCTGGCCTTGATACATCTGTCCAGAGCCCGTGTGGGTGGGCTGGGCAAAGTCTCAAAGACAAAGGAGGGTCAGAGGAGTGGTTTTTCCCACGATTGAGGGTGTTTATCCTCAAAACCCTCACTTGAATCCGATAATCCTGAGTCCTTCGAGGACATGTAATGCACATCACCGCGGTAGTCAGTGTCCGAGCGACGACGTGACCCCACGAACTTCCGGGAAGTGCAATTGGTCCCCGTTCAGCTCATGTTGTGACAGCTCGGATACAGGGTATTTTAGGAAATACAGTCCTGGACAAGTGGAAGCTAAATACTCAAGAGCAGTACAAGCCGAGCAGAGTGGCAGCAAAGTTTTGAATGACAGATCTTCGGCTGGCAGAGGCCACTTCTTGTCCCGCACCAGCAAGTCTGCCCTTGTTCAAGGAGGAAAACGTCTGTACGAGCACAGAAATGACCCAAAAGACGTTTCACGGCCTCGTAATCTTCTGGGAAACATAGGTTCCCGGTTTGGGCTCTCATTATCTTCACAGCGCTTGTAGACGCTGCCGTTGGTTTCGGGAAGCGGAGTTCGCCACAGACGACTGTTGTCTGCATCCTTCCGAGGGGGTCGATCCCAGTGGAGTCTTTAGGCGGTGTAATTTCTCACAAAGCCCAGCCCGTGGTCTCGCGGTGCTCCGAGATCGCGCGACCGCTGAGCCTCCTGGGAAGTGTAGTTTTCCGGAAGGCAACCGTGCGACTCACCGGCAACTTTTCTCCTTGAAGCGGAGGAGTCTGAGAAGTGCCGCCGGGACCAGTGCTACGCCTGGGGCTGCCCGGCGTTTGTCTCCGACCCAGCAGCAGTATTCAAGGTCCTGGAATCGCGCAGGACTCTGGGCAGCACCGTTCCGGCGAGGCAAGCGGCCTTTGTTCGCTACAGCTACGCGGCGCGTCAGGCACTGCCCTTCTATAAGAAGAGAACCTGGAAAGAGGACTGTGTTGACTATTGGAAATTGCAAAGTCATGTTTCAGGTGACATTTAGTGATGTGGCCATAGACTTCTCACATGAAGAGTGGAGATGGCTCAATTCTACTCAGAGGAATTTATACAAGGATGTGATGGTCCAGAATTATGAGAACCTGGTATCCCTAGGTCTTTCCATACCTAAGCCATATGTGATTGCTTTATTGGAGGATGGCAAAGAACCTTGTATGGTGGAGGAAAAGCTGTCAAAAGATACATTTCCAGAGAATTTCTGCTGAAGGGAAGTCACATAAATGTGATATACTTAAGAAGAGTTTACCAACAAATTCAGTTATAAAAAATGAGAATATCAATGATGGAAAGAAACTTCTGAATTCTAATGAAAGTGTAGCAGCCTTCAGCCAAAGCAAATCTCTTACCCTTCACCAGACTTTGAATAAAGAGAAAATCTATACATGCAATGAATGTGGGAAAGCCTTTGGCAAACAATCAATCCTTAATCGGCACTGGAGAATTCATACAGGAGAGAAACCCTATGAATGTCATGAATGTGGGAAGACTTTTAGCCATGGCTCATCCCTTACTCGACATCAAATAAGTCACAGTGGAGAGAAACCTTACAAATGTATTGAATGTGGAAAAGCCTTTAGCCATGTCTCATCACTTACTAATCATCAAAGCACTCACACTGGAGAGAAACCATATGAATGTATGAACTGTGGAAAGGCGTTTAGTCGCGTTTCACATCTCATTGAACATCTGAGAATTCATACTCAAGAAAAACTCTATGAATGTCGAATATGTGGGAAGGCATTCATTCACAGGTCATCTCTCATTCACCATCAGAAAATTCATACTGGAGAGAAACCTTATGAATGTAGAGAATGTGGAAAAGCCTTTTGCTGTAGCTCACACCTTACTCGACATCAAAGAATTCATGCTATTGAGAAACAATTTGAATGTAACAAATGTCTGAAAGTCTTTAGCAGCCTCTCATTTCTTATTCAGCATCAGAGTATTCATACTGAAGAAAAGCCCTTTGAATGTCAAAAATGTGGGAAATCCTTTAACCAACCTGAATCATTGAATATGCATTTGAGAAACCACACTAGATTGAAACCATATGAATGCAGTATATGTGGGAAAGCCTTCAGTCACAGGTCATCTCTGTTTCAACATCACAGAATTCATACTGGAGAGAAACCCTATGAATGCATTAAATGTGGGAAGACCTTCAGCTGTAGTTCAAACCTTACTGTACATCAGAGAATTCATACTGGAGAAAAGCCATATAAATGTAATGAATGTGGGAAGGCATTTAGCAAAGGCTCAAATCTTACTGCCCATCAGCGAGTACATAATGGAGAGAAACCCAGTAGTACAATAAGTGTGGAAAAGTCTTTAGGCCATATGAGTCACTGTGTGTATGAAAGATCACATAATAGAGAAACTGCATAAAGGCAGTGTTCATCATACTATACTGTAGCTGTAGATCTTCTTGGATTCAAAATCAGAAAATCTATACTGGAGAAAATGTAATGAATATGGGAAAGTCTCTAGCAATGATATAAGCCTTATTGTTTATCACAATTCACACTGTAGAGAGACTATGATGGCAATAAGTGTGGGAAAGACTAGCCAGCATTAATCCCTTAGTTGACATAAGTAAATCCACACTGGAGAAAAACCCTTTACATGTAACAAGTTGGGAAAGACATTAGGCAAACATGAATCTCTTAAGAAACATTACACACATACAGAAGAAAAGCAGTACGAATATAGAAATTTTGGGAAGTCCTTCAGTTAAAATACATCCTTCATTCTCTACATCAGAGAACTCACACTGAAGAGAAAGTTTATGTAAGGAATGTAGCAAAGTGTTAGTTCACTAAGCTTGCAGGCATCAGAAGATTAATGCTAGAACCACCTGAAGGATGTAGGAAGTATGTGTAAGTCTTTCTTTGCAATGATGCTAATTTGTAAACAGTTCTACAGGAGAGCAAACAAGCATAAATCAACATGCATATCATAAAGTAGCAGCATGCATTTTACTCCAGGTCCTACATAAAAAATAGCTAATGGGCATGTGAAGATATATAGTCACTCAGTGAATCCAGTAAATGTAATAAATGAACATTGCAATAGAAGTAAAAAGTGGTATGAATAAAATTTTTCATCTCTAATAAAGTGGTTTTGTGTATGTTGAACTCCTTTGACACACTGATATTTCTTAAGAGTTTTCCACTATTTTTCTCTTGACAAATGAGGATCAGCTTTCCTGTATAGCCTTCGGTGGAAGACCAGCAAACCTAGAAAAAAGTGGCCTGATCTCTGTACTAAGAATGCGACTATTTTGGTGAGGTTAATATACAGTGCATTTCCTGTTGACTTAAATGATGCATTTTAATTTTTACGTGTGCTGTGAGAACCCAACCAAGAAATTACATACAGTGAGGGATTAGAGCAGAGTGGATGTGCTTTTTAGTCCAAATCCTAAAGGATGAGTCCTAATTACAGTGACCATCCATAACTGCAGATTCTGCATCTGTAGATTCAACCACTCACAGTTGGAAGTGTTTTTTGAAAAGGTTTCATCTAAAAAGAAAACTTGGGACTTACCAGCTGTAGGCAATTATTTACATATCATTCACATTACGTTTACAACTATTGACATTGTATTGGCTTTTGTAGTGGCTCAGGGAATACATCATATTAGGTGATGATTTAAAAGTATACAGGAAGATGTGCCTAGGTTATAGCAACTATGCCATTTTATTTAAGGGACCTGGAGCACCTACAGGTTTTGGTATCTGTGGAGGTGAGGGAGTATGTTGGTCCTGGAGCCAGTTCCTTGCCGATAAAGGACAACTGTAGGTAAGGCACATGTGCTCTCAAGGATCATTCTAGGCAAAGCAGACCAGCAAGTTCTATCATGTTTGATGCAGCTGAAATGCATTATGTAGTGTCTAGTTTCTAGTTTTGTGGCTTAGGTATTACTGCTGGCAGCAATACTAATAAAGCATCAGTTGTTTCCCCATCCCTTGATCATTGTTATGGAGGGTTGGAATTGAATAATCCAGAGCCATTCCCACAACTTCTGCAGCCTGCTCACCAATTTTGATAGCACTAGTATCCTGCATCATAGCTTCTGGAAATATTTAAGAGCATTTTTGTTTTTTACACTGAAGCTTGACAGATAAATATAGTTTCTAAGCAGGGTGGCTTCAAATATTCTAAATGGAATAGACTTACTGGCTTCACAATTTCTTGTGACTGGAGAGGTTATAGAGATCAGTGATGGATTTTACAGACACTGTTGGAAGTAAACGGCATTTAAATGCAATTTATGTTTCTGGTTTTATTCTCTATGGCATTTGATAGTTGTAAGTAACAAATTTTAAGAAAGGATATTATATCATTGATACAAGTCTGGTTTGGGATGAATGATAGGGTTTTCAACTTTAAATAAAATACTCACCTACTCTGGTATGTGCTACTTTAATGGAAAGCCAATAGGTGAAGGCACATTCCATATCAATTCTCAGCAGATATAGTGGGTTTGGAATGGGATTTTTAATATTAAGCAGAGATTTATATTTCCTCTGATTAGTTAATACGATTTTGACATTCTATGGAATGTTGAAGGATCTTTGAGAGGTTTATAATTAAAGGAGCACAGGATGGTATCAAACAAGGATAAGAACATTTATGATTATGGATGGACTGGCCCCTACATGTATATTTAGTTGTAAGATAGTGGCAGTAGCTTTTTGTTTCTCCCATGCTCTGCCCTCTATTCTCCCAAGCACTGATGCCAAAAAGATGAACCAGTCCTTTAATCTCCCAGATTTTATTTGCTTTCACTACATACAGGTTCATGCCATCTTACTTTGTTATAAGATTCATCCAGATACTCATACTTTTTCATTTAAAAAGCATGAGCATACATATCATAATATTTTGCAATTCTTAAAGTGCCTTCACAGTGATACTGAACAAGGAAAAGAAAGCCAGAGACTTAAAGATAGCGAAGGTTTTAAGGAAGCAATAAGAGTATATACCTTGTTACAATAAGATTTGAGCCGAGATCGTCCTGATGTTATAATATCACTAGTGGAGAATCATGCTCAGTCTTACTCAACCATTTCTTGAGCATCTACTGCAGTCAAGGTAAATAAGACATGTTCCATACAATTTAAGAGCTCAAAAGTGTGTGTGTATGAACAGCATAGGCTCTGGAGTCATGTTACCTGGGTATAAATCCAAGTTGTGTGTATATTGACTTTGTACAGCCTTGGACAATTTACCTTGCTGTGCCATCTGTAAAATTATTTTGTCTGTAAAATGATATCTCAGGATTATGATGAAGATTAAGTAGGTTAATTGGTATAAAATGCTTTGTACCTCAAAAGCATTTAAATATTAGCTATTGATTTCATCATTTTCTTCACATGACTGCATTATTCTGGTCTCAAATGTCACATCTTCTAGTGGGTTTTCATAATCACTTGTCACAACTTACTTATTGATTCACCTTTTGGTAGCTTTTACAAGACACTCCCATTTCCTTCCAACAAATCTTCCTTTGGTAACTGAACCATCTTGCAGGAGAATATATTTATTATCCAAAATACCCTGAGGAGACAAGAACACAGCATGGCTACAGGTAGTTGGGAGGGTATACTACACATGTGTTTTGGAGAAAGAGCAGAATGAAAGAGTCTTCAGATCCCTGTATGGAGTAGAGTAAGGCTTTACCCAGTATCAGAAGCCTAAAGGACTTGAGCATGACCTCTCAGTACAAGGTCCTCTGGGTTGAGTGCAACTGCCCTCACTGTTCCTGAATGGAGGTTCAGTTCAGTTCAGCTCAGTCATGTCTGACTGTGACCCCATGGACTGCAGCACACTAGGCTTTCTTGTCCATCACCAACTCCCAGAGCTTGCTCAAACTCATGTCCATCGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCTGCCTTCAGTCTTTCCCAGCACCAGGGTCTTTTCCAATGAGTCAATTCTTTGCATCAGGTGGCCACAGTATTGGAGATTCAGCTTCAGCATCAGTCCTTCCAGTGGATATTTTGGACTGATTTCCCTTAGGATGGGCAGGTTTGATCTTGTAGTCCAAGGGACTCTCGAGAGTCTTCTCCAACACTACAGTTCAAAAGCATCAATTCTTTGGTGCTCAACTTTATGGTCCACTTGTCACATCCATACACGACTAGTGGAAAAACCATAGCTTTGACTAGATGGACCTTCATGTTATTGAAGATCATTGATGCCTGGAAAGTGAGAGTAGCTTCAATAACCTTGGGCTTGTCAGATGTTGCTAGAGACACTTGTGCAGTCATTCATAAAGATCCTGAAAGAACTAAGGCACATATCACAGCACTTTGTGGGAGGCTAGCTTTGTGTTTGACACCAAAGAAGAGTCACACACTGTCTTTTAAACAGGATGCAATTATGTCAGAGAAAAGAAATGTCTATGATTTCACTGATGAAAGACAATGACAAAGTTGTGTGGCTTGAGAGACACAGAAAGTAAGCTCTGGCATTAGAGATTAACCAGGAAAAAATATAATGGCAACAAACAACATTGTTATCAGCAGTGGTTAGTTTCATGGCTATGTATGGTGCACTGTATACCTGCACTGTATGCTAAGGACTTTGCAGCATTCAAGCAATTAAATTTCCCAGTTCTAGACCCAAATTTCCAAGTTTGAATCAGCCTATTGATACTGGCACTTGCTTTCCATTAATCTAAGGAAATTTACTTCTCAAGTTTTGACTTCTGCACCCAAACAGAAATAGTTTCCATTTTATCAGATGGTTTTGAGAATTTACGCATAAAGCAAACAATGGAGTGCCTGGCACATGTAAGTCATTCAGTGTGTTTTTCTTACTTTTATTAATCCTCCCACAGACTATTATATAAATATTATAATCATTTTTATGACACAGTCAGCAACCTGAGACTCAGGCAGTATTAGCAAATATCCCAGAGTCACACATCTCAGGAACATAGGCTGAATTTGTAGATCTAGTGAAAGGCATGCAGTTACCTCCTTGGCAGTATTGTGTCTCAGAAGACCAAAATTCTTCTGGCAATCACACAGATCTTCTCATGCCTCCTTGAACAAAAAAATATTCCCTTAACCAAGTATTCCCTTTGATTCATTCAGCCTAGAATGTCTCCAATATATTCCAGCCAGAGAGACTAATGTCTACCTTACAAAGTTCATTGTAGTGTCTGACAACAATTCCTCAGACAATAATGAAGAAAATGAGGGGTAAAGAAGTTATAAGGCATTTGAAAATGATGAACAAATTGACAGAAGTTCCTCCGATCCAGTAATTAAATGTAAATGGATTAAACTCACCAGTCAAAAGACAGAGAGTGGGAGATTTCAATACCCTACTTTCAGTAATGGATCGATCAACCACACAGAAGATAAGTAAAGAAACAGAGGACTTGAACAAATCAATTTTAAAAATCTAACAGAGAAGTGACACTCTACCTGAAAACTGCAAAATATACATTCTTCTCAAATGAACATGAAACATTCTCCCTAAATTATTGTATCATCACACAAAGTAACTTAAGTGACTGCAACAGGATGAAATTAGAAATGAATAAGGAAAACTGGAAAAATCACAAATGGAAATTAAAGTGCACACTCTTAAACAACTGCTATGTCCTGAAAATTCATATGATGAAATCCTACTAGCCAATTGGATGGTGTTAGGAGGTGGGGCTTTGGGGAGGTGCTTAGGTCAGAGGGGTGGAACCCTCATGAATCAGATTAGTTCTCTTATAAATGAGATCTTACAGAAGATATTAAGAAGAGGTGGCAAGAGTACACTGAAGAACTGTACAAAAAAGGGTCTTAATGACCCAGATAACCATGATGATGTGATCACTCACCTAGAGGCAGACATCCTGGAATGTGAAGTCAAGTGGGCCTTAGGAAGCATCACTAAGAACAAAGCTAGTGGAGGTGATGGAATTCCAGCTGAGCTATTTCAAATCCTAAAAGATGATGCTGTTAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAAGTCATCAGTGGCCACAGGACTGGAAAAGGTTTCTTAATTCCAATCCAAAGAAGGGCAATGCCAAAGAATGTTCACACTTACCACACAGTTGCACTCATTTCACATGCTAGCAAGGCAATGCTCAAAATCCTTCAAGCTACGCTTCAATGGTATGTGAACCGAGAACTTCCAGATGTACAAGCTGGATTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCTGTTGCATCATAGAAAAAGCAAGAAAATTCCAGAAAAACATCTACTTCTGCTTCATTCAGTTTGTTGTGACTATGTAGATCACAACAGACTGAAGAAAATTCTTTAAGAGACAGGAATACCAGACCACCTTACCTGCCTCCTGAG EMBV3_01960 CCTCATGCTGTACTATCCTTCCATGGCCAGTGGCCTCCTTACTGAAGGGAAGACAAGGCA Variant GeneID:613505|GPR143:XM_002700459:23_cdna 567^676 1 EMBV3_28257 GeneID:613505 X GENE GPR143 NULL G protein-coupled receptor 143 EMBV3_17572 ACAAACCCATCAGTCTGGGAGAGCGTTGGAGTGGAAATCATGTTGCCTGGGATGCTGGTT Gene GeneID:532578|SETD5:XM_002696886:336_cdna Constitutive 0 NULL GeneID:532578 22 GENE SETD5 NULL SET domain containing 5 EMBV3_18844 GCGAACATGAAGGGTTTAGAAGGAAGTTGTTCACAGGCGCAAAGACCAGATGAGCCTCTG Gene BVT0102_147294 + 1 EMBV3_10430 GK000029.2:51335169-51367008 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38285 CCAGGGACGGTGCTGCTTTGGGCCAACAAGTTCAGATTCAGCACCGACTACGAATTTTTA Gene GeneID:519447|LOC519447:NM_001100383:17_cdna Constitutive 0 NULL GeneID:519447 12 GENE LOC519447 NULL similar to OTTHUMP00000018663 EMBV3_20695 CCTTTGGGGAGGCGGGTTTGAGATTCCTTCATCCATCTCGCTTGACAGCCATGGGAATAA Gene BVV0102_367782 + 0 NULL GK000010.2:71916531-71986325 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017776 1 XLOC_009106 NonCoding TCONS_00017776 XLOC_009106 NonCoding NonCoding DAAM1 10:71906923-71980683 x TSS12082 733 1 TCONS_00017776_1 41 0.487039563437926 3 0.99010290269662 0.00114244059238843 0.00271888285950854 0.00420827339056911 0.00231474202752872 0.00338799695871486 0.000319869446500474 0.000397797276866127 0.000702019365865208 0.00118782415622073 5.61322164196411e-06 0.000193628082728007 0 0.000322941107161789 0.000699153662142617 0.000575624947319927 0 0 0 0.00129993782138357 0.00129177114760927 0.000165660908545524 0 0 0 0.00228609395122708 0.0021393644205358 0.00105665292441745 9.17274321788017e-05 7.94751707292791e-05 0 XR_247167.1 LOC101927827 PREDICTED: Homo sapiens uncharacterized LOC101927827 (LOC101927827), misc_RNA. 7e-08 62.6 85.19 0.0723055934515689 0 noncoding 0 0 0 0 -0.0387961595753402 0.714942234816318 -0.0469570490917449 0.34640227282273 GCTTCTTTATTCCTTATCCCATGAGCACCCGCGCCCCTGCCTTTGGGGAGGCGGGTTTGAGATTCCTTCATCCATCTCGCTTGACAGCCATGGGAATAAACCTCTTTGCTACACAACTCAGTGTCTCAGCATTTCACTTGCTGTAAGTTGGGCAAGATGAACCTGGTTCATTAACAACAGCATGTAGCAAATGAAGAAGCGTTTATGCAAGAAAGTCCACTATAACTCAGTAAGAACAGCTACAGTGGGTAGAACTTGAATTATAACCCACTCCTTCTCCCAGCTCACTGCGACAGAGACTCCGTTTCAGCAATGGATGAGAGTTCCTGTCGCTCCACATCCTCGTCAGTGTTTGGGGTTCTGACCCTTCTAACAGGAGGTAAACTGGACTGACTGCTCCTGGCCACTGTAACACGTGGAGGGCAAGCATTCTGAGCCATCGTGATCTCCTCGCCTTAAGAATGGACTGTACCCTTAAAGTGTTCAATGCATTCTCCCCAAAGGGTCAATGCAAAGACGACAGAGAAGTTCCACTGCTCTACTGACAGTGAACATTTATCAAGAGAACAGGAGCACTGAGCAGACCTTGAAGAGTCTCTAGCCCAATCCACTGTCACAAGTCCTACGTCACAGGTAGCAAAGTGGTAGAACTCTGGGTCCAGTGTCCCAGCTCCCGTGATGCCCGCTGCTGTGTCGCCAGGCTAAACACAGTCTGCCTTTGCTTCTCTGTTTT TCONS_00014612 TCONS_00014613 TCONS_00014614 TCONS_00014616 TCONS_00014618 TCONS_00014619 TCONS_00014620 TCONS_00014621 r 3' 126 TCONS_00014614 r 5' 0 EMBV3_20726 CAGGCCTGATGAGAGCCATTTATAAGATTAGGTCAGTGTGGTCTTCAGCGCTGCCATGTC Gene BVV0102_278342 + 0 NULL GK000015.2:54192908-54196169 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37424 TTGCCACCTCTGCAAGGCCTCACCAGCCTTAGCTATACTAGCACTTCTCTGAGTGCCAAA Gene GeneID:541266|SLC22A5:NM_001046502:66_cdna Constitutive 0 NULL GeneID:541266 7 GENE SLC22A5 MGC128277 solute carrier family 22 (organic cation/carnitine transporter), member 5 EMBV3_34009 AAGAAGGCAGCGGAGGACAGGAGCAAGCAGCTGGAAGATGAGCTGGTGTCGCTGCAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40735 CTGTACGGAGGTGTGTGCTATGCTGGGATTGATACCGACCCTGAGCTGAAATACCCCAAA Gene GeneID:538794|CPEB4:NM_001105420:136_cdna UTR3_Alt 2 NULL GeneID:538794 20 GENE CPEB4 MGC159945 cytoplasmic polyadenylation element binding protein 4 EMBV3_39674 AAATCTTTGGCAGCCTTGAGTTTTCTCAGGCAAGCAGTCTGGGGCAGTGTTGGTGTCATC Gene BVT0101_057852 + 1 EMBV3_05682 GK000021.2:31140269-31178543 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20955 ATCGCGAAAGGCTCCGAAAAAAGAGAATAAACTCTGCCATCAAGACGAGCAGGAGGGTCG Gene GeneID:515465|ICT1:NM_001034493:407_cdna Constitutive 1 NULL GeneID:515465 19 GENE ICT1 MGC127253 immature colon carcinoma transcript 1 EMBV3_35348 GCTCTCCTGCGCAAGTATCTACGTCAGTGAGCTGGAAGTGTTCATCATAGGAGGCATCAA Gene GeneID:510984|LOC510984:XM_002699172:69_cdna Constitutive 0 NULL GeneID:510984 29 GENE LOC510984 NULL similar to olfactory receptor Olr1242 EMBV3_17796 TTACTTTCAAGGGATTTTCTATCTGACAAAAATATGTCTTGCCAAGAAAAAACACTGAGG Gene GeneID:100296421|LOC100296421:XM_002688329:200_cdna Constitutive 2 NULL GeneID:100296421 6 GENE LOC100296421 NULL similar to UDP glucuronosyltransferase 2 family, polypeptide B17 EMBV3_23599 GATCTTACCACTGGGGGAAACTCAGACTCCCTGTACTATTTTTGCACCTTCCTGTTAATC Gene GeneID:519513|BRCC3:NM_001075790:5_cdna Constitutive 1 NULL GeneID:519513 X GENE BRCC3 CXorf53 BRCA1/BRCA2-containing complex, subunit 3 EMBV3_31390 GGCCTGAGCAGGATGAGCTTGGGCCCTGGTTGCAGACTCAGTAGCGTTTTAGATGTTTTA Gene GeneID:538479|KCNJ12:NM_001024690:150_cdna Constitutive 0 NULL GeneID:538479 19 GENE KCNJ12 IRK2 KIR2.2 potassium inwardly-rectifying channel, subfamily J, member 12 EMBV3_34073 AGCTTCTGCACAGCAAAGGAAACCATTAACAAAATGAAAAAGTAAATTATAGAAAGGGAG Gene BVT0102_211217 + 0 NULL GK000008.2:75364424-75636005 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28631 AGACTCCAGACTCCGAAACTCCTATGTATCCTGGCTCCTGGCTTGCCTCTTTGGAGCAGT Gene BVT0101_000572 + 0 NULL GK000016.2:45126492-45197389 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33475 GGATGTATTGTACAGAAAACACGAACGACTCTCCCTTATTCCACGTCTTCAGCATCGTTG Gene GeneID:522091|ASXL1:XM_002692288:1653_cdna Constitutive 2 NULL GeneID:522091 13 GENE ASXL1 NULL additional sex combs like 1 (Drosophila) EMBV3_42604 TGTGCCTGTCACCTATGCACAGTATGTGTGTTTTACCTGCCCCTCATCAGCTTGGCAGTG Gene GeneID:783558|LOC783558:XM_002693235:485_cdna Constitutive 0 NULL GeneID:783558 15 GENE LOC783558 NULL similar to olfactory receptor MOR20-1 EMBV3_39909 GACAGACCCACCTCAGACACCACGGGTGGCAAGACCGCTGTTATTGCATCAAGAGTTTTA Gene BVT0102_074848 + 1 EMBV3_37615 GK000007.2:111466023-112060683 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214898 TCONS_00214896 TCONS_00214899 TCONS_00214903 TCONS_00214905 TCONS_00214897 TCONS_00214904 TCONS_00214895 TCONS_00214900 1 XLOC_130789 Coding TCONS_00214903 XLOC_130789 Coding Coding MAN2A1 7:111403726-111607153 j TSS160624 6041 1 TCONS_00214903_5 828 22 0.970411845093547 1.32250668765263e-13 0.000495903915281935 0.000205766516087441 1.51409947362104e-08 0.000645567239626516 0.00012526989359902 0.000278415384588801 0.000179002889236991 0.000410222119941011 0.000118812806663369 0.000188490598271444 4.69721635669494e-05 1.24561446420136e-05 3.44539549146535e-13 9.59077759995961e-12 0.00264275512291942 0.00114107853385737 0.00440785990635195 0.000436480026855215 3.32082861760779e-05 1.68581929315622e-06 0.000628224892731712 0.000818175056881431 0.00388724834134878 0.000821659240830471 0.000938925397110537 0.000490972424169531 1.56787932266503e-07 1.90093668176506e-06 4.23632732207152e-05 NM_001205886.1 MAN2A1 Bos taurus mannosidase, alpha, class 2A, member 1 (MAN2A1), mRNA. 0.0 7038 99.80 0.649561330905479 NM_002372.2 MAN2A1 Homo sapiens mannosidase, alpha, class 2A, member 1 (MAN2A1), mRNA. 0.0 4442 84.54 0.661645422943221 TCONS_00214903_5 sp|Q16706|MA2A1_HUMAN MA2A1_HUMAN Alpha-mannosidase 2; 0.0 1368 79.85 0.981884057971015 3 coding 0 1 1 1 -0.149725617875932 0.58448546261357 0.06165325457376 0.29572177240865 CTTCTGTTCGTAGTTGTGATTGGGTCAGCTTTCAATGTTGCAAGAAAAAATAGACCATTTGGAACGCTTGCTAGCTGAGAATAATGAAATCATCTCAAATATTAGAGACTCAGTCATCAATTTGAGTGAATCTGTGGAGGATGGTACGAAAAACTCAAAAGGCAATTTCAGCCATGGTGCTGGCTCTCCTCTTCTGCCATCGAAACGTTTGTCCCTCACAGTTGACCCTGCAGACTGTCTGTTTGCTTCACAAAGTGGAAGTCAGAGTTCAGAGGTGCAGATGTTGGATGTTTACAGTCTAATTCCTTTTGACAATCCCGATGGTGGAGTTTGGAAGCAAGGATTTGACATCACTTATAAGCCTGATGAATGGGACACTAAGCCCCTTCAAGTCTTCGTGGTGCCTCACTCCCATAATGACCCAGGTTGGTTGAAGACCTTTGATGACTACTTTAGAGAGAAGACTCAGTATATTTTTAATAATATGGTTGTCAAGTTGAAAGAAGACCCACGGAGAAAATTTATATGGTCTGAGATCTCTTACCTTTCGAAGTGGTGGGAAGCTATAGATGTTCAGAAGAAGGATGCTGTTAAAAGTTTGCTAGAAAACGGTCAGTTTGAAATTGTGACAGGTGGCTGGGTAATGCCTGATGAAGCTGGTGCACATTATTTTGCCATAATTGACCAACTAATTGAAGGACATCAGTGGCTGGAGAAGAATCTAGGAGTGAAACCTCGGTCTGGTTGGGCTATCGACCCATTTGGACATTCACCAACAATGGCGTATCTTCTAAAACGTGCTGGATTTTCTCACATGCTTATTCAGAGAGTTCATTATGCAGTTAAAAAACACTTTGCATTGCATAAAACACTGGAGTTTTTTGGAGACAAATTGGGATCTGGGATCTGTCACAGACATTTTTTGCCATATGATGCCCTTCTACAGCTACGACATCCCCCACACTTGTGGGCCTGATCCTAAAATATGTTGTTTTTTTGATTTTAAACGGCTTCCTGGAGGCAGATACGGTTGTCCCTGGGGAGTCCCCCCAGAAACAATATATCCTGGAAATCTCCAGAACAGGGCCGAGATGCTCCTGGACCAGTACCGAAAGAAGTCAGAGCTCTTCCGTACCACAGTGGTCCTGGCCCCGCTGGGAGACGATTTCCGCTACACCGAACGCACCGAATGGGATCACCAGTTCAAGAATTACCAGCTGCTTTTTGATTATATGAACTCTCATTCTCAGTATAATGTTAAGATACAGTTTGGGACTTTATCAGATTATTTTGATGCACTAGAAAAAGAAGCTTCAGCCAGTAGTAGGAATAGCCAATCAATATTCCCTGTTGTAAGTGGAGATTTTTTCACTTATGCTGACCGAGATGATCATTACTGGAGTGGCTATTTTACATCCAGGCCCTTTTACAAACGAATGGATAGGATATTGGAATCCCATTTAAGGGCTGCTGAAATTCTTTACTATTTCGCCATGAAACAAGCTAAGCAGTACAAGATAAGTAAATTTCTTTCATCATCCCATTATGTGATGCTGACAGAAGCAAGACGAAATTTGGGACTATTTCAACATCATGATGCTATCACAGGAACTGCAAAAGATTGGGTGGTTGTGGATTATGGTACCAGACTCTTTCATTCACTGATGAATTTAAAGAAGATAATTGGACATTCTGCACTGCTGCTTATTTTGAAGGACAAACACTCATACGACTCTTATTCTTCGGATACCTTCCTAGAAATGGATTTGAAACAAAGAACGCAAAGTTCTCTACCACAAAAAAATGTAATAAGTCTGAGCGCAGAGCCAAGGTATCTCGTGGTCTATAACCCTTCAGAACAAGCTCGAAGCTCTGTAGTCTCAGTCTGTGTGAGCTCATCCGCAGCACAAGTGTCCTCTGCTTCAGGAAAGCCTGTGGAAATCCAAATGAGTGCAGTGTGGGACACAGCAACAACCGTCTCACAGACAGCCTACGAGATATCTTTTCTAGCAGAGATGCCACCACTGGGACTGAAAGTGTATAAGATTTTGGAAACATCAAGTTCAAATCCACATTTAGCCAAATATGACCTATATAATGGTAATATAGCAAATGAAGGAATTTTTAACATGAATAATATAAAAAGTGCTCAAGAAGCTATAACTCTAGAGAACTCCTTTATTAGGCTGCGCTTTGGTCAATCTGGGCTTATGGAGGAAATGCTAAATAAAGGAGATGGTAAGAGTCTTGAGGTGACAGTACAGTTTTCCTGGTATGGAACCACAAGTAAAAGGGATAAAAGTGGTGCCTACCTCTTCTTACCCGACGGGGAGGCCAAGCCTTACGTTTACACAACACCACCCTTTGTCAGAGTGCAGCGTGGAAGGTTTTATTCAGACGTGACTTGCTTTTTTGAACATGTTACCCACAGAGTTCGACTGTACAACATACATGGAGTAGAAGGACAGTCTGTGGAGATTTCCAATATTGTAGACATCCGAAAAGAGCATAACTATGAGATTGCAATGAGAATTTCTTCCAGCATCAACAGCCAAAACAGATTTTATACTGACCTAAATGGATACCAGATTCAGCCTAGAGTGACGATGAGCAAATTGCCTCTCCAGGCGAACGTCTACCCCATGACTACGATGGCGTACATTCAGGACGCCGAGCGCCGCTTGACTCTGCTCTCGGCTCAGTCTTTGGGTGTTTCGAGTCTGAAGAGCGGTCAGATTGAAGTTATCATGGATCGAAGACTCATGCAAGATGATAATCGTGGCCTTGAGCAAGGTGTCCATGATAACAAGATTACAGCTAATTTATTTCGAATACTACTAGAAAAGAGAAGTGTCGTGAATATGGAAGAAGACCAGAAGGCAGTCAGTTACCCTTCCCTCCTTAGCCACATAACGTCTTCTTTCCTGAATCACCCTGTCTTCCCAATGACAGAAAAGGTCCCCGTGCCCACCCTTCAGCTGCTGGGTGAATTCTCTCCCTTGATGGCACCCTTGCCCTGTGACATTCACCTGGTTAATCTGAGGACAGTGCAGTCGAAGGTGGATGGCAAGCATTCCAACGAGGCCGCCTTGATCCTCCACAGGAAGGGGTTTGACTGCCGCTTCTCTAGCAGAGACACCGGGCTGCTGTGTTCCACAACCCAGGGAAAGATCCTGGTCCAGAAGCTCTTCAGCAAGTTCACTGTTGTGAGCATCACACCTTCGTCATTATCCCTGATGCATCCCCCTCCAGACGCCCGAAATATAAGTGAGATCAACTTGAGTCCCATGGAAATCAGCACATTCCGAATCCACTTGAGGTGAACCTGGTTTCAGATTTGGATTGGAAAGCAATGGCTTTTATATACTTCTTGGTTTTATGTGCAATAGAGAAGCACATTATTTTAGCTTCTGGCTACTGTGAGGACATGAATTCTGTGATTCTTCTTCTTAAACCAGTACAGTAGGAGAGAAAAAAAAGCCATGCTACAAACTAATTTTTTTTTTAAGTTCCTTCCATGAACTGCTATCATCAGTATGAATTGATGCAACAAACGAAGAAATGTCTAAAGACAGCCTCTCAACAGATTGTATCTCAGGTTAAATGTTAACTAATTATATCTATGTTGGGGGTTGTAAAGAGATTGTTCTCAGTATTCATGTTGCTGACCCTTTGTTAGTTTTACAAAAATACCCATTTTTACCAAAATGGGATAAAAAGCTGGTGGGTAATAGCTAATGGCCAAAATGGTTGCAATCATTCATACGTGTTAGAAGAACTTTATGTGTTGAAATATGTGGAAAAGTGCAATCCGTCAACCCGATGATACATCGTTGCTTTTACATGTTTCTCTACCACTTGGCCCTCCCTTCCTGCCCTCTGTAAGCATTTCCAGAAATACCAGATTTTAATCATTCAATAGTAGACAAAGAGGCATATTTTCATTACTTGACAATGTGGGATAGGTGCAATTTATTCCATTGTCACTAAGCTGGGAGAAGCGATTCCGTAGGTACCATGGCCTCTTCTGGGTACCACAAGGTGTCTTTTTACACAGCTCATTTGAGTACAGATGTTCTGAGAAGGGGTTTTCTATTTTAAAAGTCTCATATCAGAATAAATGTGCCTTATTTTCTATAAGTCTTGTTAAGTCTTTTGGTGTCCATATTACTGTTGCGGGAAGGTGGGGAGTGGCTGGGGGGAGGGGCGGGTACTTTCTATGACACATAAATTGTATAATTTTTGCCTGACAATGCTGGCCACGTTCTGATCTGTTTCATTAAATTTGTGGTGATGTTACTCTAAACATTTTGACTATTTGAATGTACTGAGATGTCAGAAAACAAAACAAGGAAGAAAAATATTGTTAATTAAAATATGCTGCTGCCGAGGAGACTGCAACTTGAAGCTAGGATTTTGTAACAAGCAGAATCCACATACTGTTTTCATTTCACAAGAGTTCACCATTTTGAAGAGAGAATGCTTTAAAATAGGCCGTTTTGAAACCCACTTATATGTAACTCATCATAATTTATCATATTAAAGAATATGTTTGTTCAGTGAACTTCAAACTTTTGTACGTGCTAACCTCAAAATGAAGTTCTAAACCTATGTGCCATTACAGTACTTTAGATCAAATTTATTTGGGATCATTGTTAACTTGACATTAAAATAAAACCAACATTTAGAGTATTCCATTTTAGCATAGAAAGGATTCTTGACTATGTGCACTGCTGAAAATTCTGTGTTAACTAATAGGTTTAGTATTATCTGACTTTAAACTTCCATTTTACCTCCTGCCATTCCAACATCTTCATACAGAAATAAAACATCATTTCTGTTTTATCATGTAGCCTAGTTATCATCTGTATTACCAGTCAAGATGCAGCTCCTTAGATTATTGTTCCATTAAGTTCACAAACTTCTTTCGCCTTTAATTATTAAGGAAATAATAGTAGTGTTGATGAAGATATTACAAGAGAGTAATTTCTTGCAATAAACATGTACTGTAAGTTTCCTTCCTTGTTTTGGGGGGAGGAACAACTAAAACAAAAAACAAGCTTAATTTCTGTGAACATCTACAGACGTTAGGATTGCCAGACACAAAGCCCAGGAATAAGATCAGTATTTTCATTGCATCTTAAGTGTAAAACCTTGCTACAGGAGTTCACTGTGTTCTGTGGTTCAAGTGGTTGTACGTAATCGCTCTGGAATCTCTGATCAGCTGAAATAAAACTCTTGATGCAATAACAGCGGTCTTGCCACCCGTGGTGTCTGAGGTGGGTCTGTCCTGTGCTCCTCGGGGTCTTACTCAGTGCGTGTGGTCACCAGCTGCTCACAGGTAAAGCGGAAATTCTCTTTCACCAGCAAGTTTCTGCTCTTTATTTTTAGAATAAATCATCAGGGAAATGAAGAGAGGATGCTTTGCTTTGGGTTGTGGTCAAGAACTGATTAGATGATTTGGTGTCCCTGGCACACGCTGCAAACCGTGCCCTTCAGTCGTGATCTCAGTGGCATATTTGTTAGCTTAGATTCTATTACATTCATTATCGCAGAGGTTCAGTTGACCAAGTAGTTCATGACTTTCTCTTTTTTTAAAATTTAATTTGGAGTTATAACTGCAGTGTTTGAGAACTTAGCGTCCTTGTTTTCTGCAAATACTGATTAAAACAAAATGCTGTAAAACGTGTTGTAAAACATTGTACTTGCCTTCCCATGTCTTTGTTGTATTTGTGCTGAAATGTTTTCATATTCCTTTGTCGGGAAGAAAATCTTTGCTTTCATTTTGATTATGTTGCTTTCCTTGAAATCAATAGGTTTTGATATTTTCTCTTGGAAGATTTTATATCTTTTTGGGAATATGTAATATAAGATATCTAATAAAAGATCAATCTTACCATGTCTGTGGTCCTCTAGAGCAGTTCTTAAATCTGATTTTGTGAGCAAGATATAGTAAATGTTTCCGTGGGTAGAGTGGAGGAGTAAGGGCTTGTTTTGTCTTCTGTCATGAGTGAATTGCTCCTTCTTCAGTCCATTTCCGT EMBV3_31716 TGCTAAAGCAGTGGACGGGTACGTGAAGCCACAGATCAAGCAGGTGGTCCCTGAGTTTGT Gene GeneID:282376|STAT5B:NM_174617:39_cdna Constitutive 0 NULL GeneID:282376 19 GENE STAT5B MGC137362 signal transducer and activator of transcription 5B EMBV3_39833 ACAAGTATACAGCGTCGGTCCTCATAGCAGACCTCTTTTATATGGGATTTTAGCTCATTT Variant GeneID:782821|LOC782821:NM_001101286:19_cdna 250^334 2 EMBV3_22977 GeneID:782821 25 GENE LOC782821 NULL hypothetical protein LOC782821 EMBV3_29726 GGAGTGAAGAACAAGGCCAGCCTACCCAACTTCCTTGACCACATCATTGCCTCAGTGGTA Gene BVT0102_085788 + 1 EMBV3_29603 GK000007.2:51349771-51411291 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213412 TCONS_00213414 TCONS_00213409 TCONS_00213410 TCONS_00213413 TCONS_00213411 1 XLOC_130448 Coding TCONS_00213409 XLOC_130448 Coding Coding LOC100848816 7:51359809-51419436 j TSS159873 6471 1 TCONS_00213409_10 1599 24 0.89187602723644 0.000461894452640948 0.000700825756112483 0.000750097356855773 0.000201671081917532 0.000504338525471763 7.60726129042711e-05 6.00484800654301e-05 0.00012619744627987 0.000827465817796847 0.000256524093054723 1.34428107665344e-05 8.44382201209727e-06 3.7441921617896e-06 0.00038353509976164 4.91873061339667e-06 0.00928952230354128 0.000685362183681507 0.00315337087087513 0.000160621804452684 0.000520477013190821 4.85948857462826e-05 0.00179235395597851 0.00167646453768387 0.00236993067990848 0.000524814274424724 0.000442094121210073 0.000288237702202486 0.000795073756839295 0.000739149417285338 0.000735014776630893 XM_003582422.2 KDM3B PREDICTED: Bos taurus lysine (K)-specific demethylase 3B (KDM3B), 0.0 1.161e+04 100.00 0.995054860145263 NM_016604.3 KDM3B Homo sapiens lysine (K)-specific demethylase 3B (KDM3B), mRNA. 0.0 9355 92.21 0.994745788904342 TCONS_00213409_10 sp|Q7LBC6|KDM3B_HUMAN KDM3B_HUMAN Lysine-specific demethylase 3B; 0.0 3148 96.51 0.999374609130707 0 coding 0 0 0 0 -0.0419130026303577 0.785037199213295 0.00662784414745146 0.903062477140028 GGAGTTGTCACCTATCCTGGAAACAAAATCTTTGTAGAATTTGATGGCTGTAACTGGAAGCAGCACTCCTGGGTTAAAGTTCACGCTGAAGAAGTTATTGTACTTTTGCTGGAAGGGTCTCTAGTATGGGCACCTCGGAAGGACCCAGTCCTCATCCAGGGCACTCGAGTCTCAATTGCACAGTGGCCAGCCCTGACTTTCACTCCCCTGGTAGATAAACTCGGTTTGGGTTCTGTGGTTCCAGTTGAATACCTTCTGGATCGAGAGCTTCGTTTCCTGTCAGATGCTAATGGGTTGCATTTGTTCCAGATGGGAACAGATGGCCAAAACCAGATTCTTTTGGAACATGCTGCTCTGAGAGACACAGTTAATGCTTTGATCAGTGACCAAAAGCTACAAGAGATATTCAGCCGAGGTCCCTACAGTGTTCAAGGTCACAGGGTCAAAGTGTACCAGCCAGAGGGAGAAGAAAGTTGGCTCTGTGGTGTTGTAAGCCATCAAGATTCCATCACCCGTCTTATGGAAGTGTCTGTAACTGAGAGTGGTGAGATCAAGTCCGTAGATCCCAGACTGATCCATGTGATGCTCGTGGATAATTCGGCGCCTCAGAGCGAGGGGGGTACGTTAAAAGCAGTAAAATCTTCCAAAGGAAAGAAGAAGAGAGAGAGCATAGAGGGGAAAGATGGCCGGAGGAGGAAAAGTGCTTCGGACTCTGGGTGTGACCCTGCATCAAAGAAATTGAAAGGAGACAGGGGTGAAGTAGACAGTAATGGGAGCGATGGAGGCGAGGCAAGCCGAGGGCCCTGGAAAGGAGGGAATGCCAGTGGAGAGCCAGGGCTGGATCAGAGAACCAAGCAGCCACCGACTACATTTGTCCCCCAGATTAACCGCAGCATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGCCTGTGGGTGGGGACACACCTCTACCTTTCACTCCGTATTCTGCAGCCACAGGTCAGACACCTTTGGCCCCAGAGGTGGGTGGAGCCGAAAATAAAGAGGCAGGAAAAACACTGGAACAAGTTGGCCAGTGTATGGTGGCTTCAGCAGCTGTGGTCACTACCGCCAGCTCCACCCCAACCACGGTGAGGATCTCAGACACTGGCCTTGCAACAGGGACTGGGCCGGAAAAACAGAAAGGCAGCTGGTCGCAGGCCCCAGGAGAGAATTCAAGGAATTCTGTCCTGGCCTCTTCTGGATTTGGAGCATCACTCCCGGGTTCATCACAAGCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGGGTTCTTGCCACAGAGAACAAACCTTTGGGCTTCTCTTTTGGCTGTAGCCCAGCACCAGAGTCTCAGAAAGACTCTGATCTCTCCAAAAACTTGTTTTTTCAATGCATGTCCCAAACTTTACCCACCAGTAACTACTTCACTACCGTTTCAGAGAATTTGGCTGATGATTCCTCCAGTCGAGACTCATTTAAACAAAGCCTTGAGAGCCTCTGTAAAGGAAGATCCACTCTTGGAGCAGACACTAAATCAGGCTCTAAGGCTGGCAGCTCTGTGGATCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACGCCAGCCTTCCCACGGAGCCTCCTAAATGCCCGCACCCCAGACAGTCATGAAAATCTATTTTTACAGCCCCCTAAACTGTCCCGAGAAGAGCCTTCTAACCCTTTCTTGGCATTTGTGGAGAAAGTTGAACACAGTCCTTTCAGCAGCTTTGCATCTCAGGCATCAGGTAGCTCTTCCTCTGCTACCACTGTCACCTCCAAGGCAGCACCCAGCTGGCCCGAGTCTCACTCCTCTACAGATTCAGCATCTTTAGCAAAGAAGAAAACCCTCTTCATCACAACTGACTCCTCCAAACTGGTGTCTGGTGTTCTGGGCTCAGCTCTTACCACTGGGGGGCCAAGCCTCTCTGCCATGGGGAATGGCCGCTCCAGTTCACCCACCAGCGGCCTCACCCAGCCCATTGAGATGCCTACTCTCTCCTCCAGCCCCACAGAGGAGAGGCCAACTGTGGGGCCTGGGCAGCAGGACAATCCTCTCCTTAAAACCTTTAGTAACGTCTTTGGCAGGCACTCAGGCAGCTTTCTGTCCTCCCCAGCAGATTTTTCACAGGAGAACAAAGCTCCTTTTGAAGCTGTGAAAAGGTTCTCACTGGATGAGCGAAGCTTGGCTTGCAGACAGGACTCAGACTCCAGTACCAATAGTGACCTGTCAGATTTAAGCGACTCTGAGGAGCAGCTCCAAGCCAAGACCGGTCTAAAGGGGATTCCGGAACACCTGATGGGGAAGCTGGGCCCCAATGGGGAACGCAGTGCTGAGCTGTTGCTGGGAAAAGGCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGACTGCTCCCTTGAAAGTGGGCCAGTCAGTGCTGAAAGATGTGAGCAAAGTAAAGAAGCTGAAGCAGTCCGGAGAGCCCTTCCTGCAGGATGGGTCTTGCATCAATGTAGCCCCTCACCTGCACAAGTGTCGTGAGTGCCGCCTGGAGCGGTATCGGAAGTTTAAGGAGCAGGAGCAAGATGATTCCACTGTGGCCTGCCGCTTCTTTCACTTCCGGAGGTTGATCTTCACTCGAAAAGGGGTACTCCGAGTGGAAGGGTTTCTGAGTCCCCAGCAAAGTGACCCTGATGCCATGAACCTGTGGATTCCCTCTTCCTCCCTAGCAGAAGGAATAGACCTAGAAACCTCAAAATACATTCTGGCCAATGTTGGAGACCAGTTCTGCCAACTTGTGATGTCTGAGAAGGAGGCCATGATGATGGTGGAGCCACACCAGAAAGTGGCATGGAAGCGAGCGGTCCGAGGTGTACGGGAGATGTGTGATGTATGTGAAACAACCCTCTTCAACATCCACTGGGTTTGTCGCAAATGCGGATTTGGGGTCTGCCTTGACTGTTACAGGCTCAGGAAAAGCCGACCGCGCAGTGAGACAGAAGAGATGGGTGATGAAGAGGTTTTCTCCTGGTTGAAGTGTGCAAAGGGGCAGTCCCATGAGCCAGAGAATCTCATGCCCACACAGATAATCCCTGGCACAGCTCTTTACAATATTGGAGACATGGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATTAGTCGGCAGAACAAATCTGTGTTGAGACCTGCTGTCACTAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAATGAAACCACCTTCTCAAGCGGAGGAGGAACTGCACCGGGAGCACAACCAGAGACAGACCATGTTCCCAAAGCCGACAGTACTGACAGCAGATCAGATGAGCCTCTGAAAGCAGACAGTTCGACATCAAATAGCAATAGTGAGCTAAAAGCCATCAGGCCCCCTTGCCCTGACACAGCCCCACCCTCCTCTGCCCTGCACTGGTTGGCGGATTTAGCAACTCAGAAGGCTAAAGAAGAAACAAAAGAAGCAGGGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGATTCGTTCAACTCCACTGCAAAGGTCTCTCCGTTGACTCCAAAGCTTTTTAACAGTCTGTTACTGGGTCCCACTGCCTCCAACAACAAAACTGAAGGCTCTAGCCTTCGAGACCTCCTCCACTCCGGGCCAGGAAAGCTTCCTCAAACCCCCTTGGACACAGGCATACCCTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAACAAGGCCAGCCTACCCAACTTCCTTGACCACATCATTGCCTCAGTGGTAGAAAATAAGAAAACCTCAGATGCTGCAAAGCGGGCCTGTAACTTGACTGATACCCAAAAGGAAGTGAAGGAGATGGTGATGGGGTTAAATGTGCTGGACCCCCATACCTCTCATTCCTGGCTCTGTGATGGAAGACTTTTGTGTCTTCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCCGGGAGTGTTGGAAGCAAGGCCAGCCAGTGCTGGTTTCAGGAGTACATAAAAAGCTCAAGTCTGAACTCTGGAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCAGGATGTGGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTCTGGGATGGCTTCGAGATCATATGCAAACGATTAAGGTCAGAAGATGGGCAGCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGGGGAAGATTTTCGGGACATGATGCCAACAAGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAGCGAGATGGCAGGCTCAATCTGGCCTCCAGGCTACCCAGCTATTTTGTAAGGCCCGATCTGGGCCCCAAGATGTACAATGCCTACGGCTTGATAACAGCAGAAGACAGAAGAGTTGGCACAACAAATCTTCACTTAGATGTGTCTGATGCAGTTAATGTGATGGTGTATGTTGGGATCCCCATCGGGGAGGGTGCTCATGATGAAGAGGTTCTCAAAACAATTGACGAGGGAGATGCTGATGAGGTGACAAAGCAAAGGATTCATGATGGAAAGGAGAAACCCGGTGCTTTGTGGCATATCTATGCAGCCAAGGATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAGCAAGGCCAAGAGAATCCCCCTGATCATGATCCAATTCATGACCAAAGTTGGTACTTGGACCAGACCCTACGTAAGCGGCTCTATGAGGAATATGGTGTGCAAGGCTGGGCCATTGTTCAGTTCCTGGGAGATGCTGTCTTCATACCTGCTGGAGCCCCACACCAGGTGCACAACCTATATAGTTGCATCAAAGTCGCAGAAGACTTCGTGTCTCCAGAACACGTAAAGCACTGTTTTCGCCTGACGCAGGAATTCAGGCATCTCTCTAACACTCACACAAACCATGAGGATAAACTGCAGGTGAAGAACATCATTTATCACGCAGTGAAAGATGCTGTTGGCACCCTCAAGGCTCATGAGTCCAAGCTGGCAAGATCGTAGGCGTGGAGAAATTTCAAACTCCCCTGTGAAGCAGGTCTTTCACTCACAACACATACAGGGAACGACAGGGTTCTCTGCTGGAGCAGAGGTCCTTCACTTGGAGCCAGTGTGGTCAGTATTACAAACTCTCCAGCCACTCTTTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGCACTGTTCACACACACAGTTTCAGACTCCAAGCCGAGGGTGCCACATCCCTATCCTGTGGCCTTTTGGGACTTCAGATTGCCTGAACATCACTGGGCTGTCCTGCACATTCTCATGATTTGAGATTTGTGGAAACCAGGAATGTGGGCACACCTTTCTTTTTTTTTTCTCTTGTGCCTAGTTAAGTGGGAATGTGTTTGGAGGTAGGGGGAAATCACATACCTGGTACATGTGGGGGCTAATTGTTTAAACACGCCTGGTGGAAGCCTGATGGTGTCTCTACACATGACCTCTGACACAGCCCATCCCAGGAGATGGGTGAAGCCATTCCCCACCATCTCTCTCCCATGAACACTGAAGTCTTGAAGGACCCAGGGAGAATCCACTGCTTTTCCCAAGAGGCTCCAGGATTAGGAAACGTGTGTATTTAGTGAAAAATAGGTTTGTAGTGAAATAGTTACTATTTCATGAAAGTAGATATTTTTAGAACTTTTGAAATACCACAGTTTTTTTCCTGGATTATGAGGAAAGGCACATTACATTTAGTCTTCCTTCGAGAAAACTCTTTGAAGAAATAAGATTTTTAGAAATCAACTGCCCATTATAGCACAAAAATCAGCCAAAGCAGAATTTAAAAGAATTGGCTTTTTAGGGTTCTTTTAATTTCACCCCCCTCCCATCTCAGCCCTATCTTGAGGGAACAGCCATCTTGAGAAAGAACTTTGTCGTGTCTGAGCTGTGGTGTGTTCCATGCATACACACACTGGTGACTCCAGGAACCATTTCCACCTATTACCAGCGTTCCCTTGGGACTCCTCTTGTAGTTCCAAATTCAAAGGAAAGTTTGCTTTCCTACATGAGGCGTTTTGTTTTGGGAGTTTTTTTGTCCAGAAATATTTTCAGCAAAACTTTCCAACTCAGTGGAGTTTTATTAAGAATTTATTTGAAAATGATGGAATTCATTGGCCCATAGATACATTGGAAAATGTATCTATCTTCTTCCCAGCTGTACTGTAGTGCCCTGCAGGCTTGTTTATATGTTCACAGTTACTTTTTTTTTTTTTTAATAAAAGTCATTTACTGTAGAATACTTTTAATTTCACTTTCTGTATTTTAATTTTGTTGAAGGGCTGATTGGGATTTCCATGTTCTTATTAAAAATCTAACAAATCTGTTCATA EMBV3_28724 GAGGGCGAGTACAGCAGCCTGGAACACGAGGCTACAAGGAACACAGGGAAGAGTATTGCC Variant GeneID:614145|IDH3G:NM_001076313:76_cdna 558^941 2 EMBV3_11793 GeneID:614145 X GENE IDH3G MGC139826 isocitrate dehydrogenase 3 (NAD+) gamma EMBV3_38462 CTCTGAGGATGACCTCAAGATTCTTTTCTCCAGTAACGGCGGGATCGTCAAAGGGTTCAA Gene GeneID:282018|PTBP1:NM_174442:2_cdna Constitutive 0 NULL GeneID:282018 7 GENE PTBP1 NULL polypyrimidine tract binding protein 1 EMBV3_23324 GAGAGTCCCTTGGACTGCAAGGAGATCAAACCAGCCAATCATAAATCAACTCAGTCTGAA Gene BVV0101_029260 + 1 EMBV3_31505 GK000012.2:38344526-38816157 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41453 TCAAGCAGGGAGTGAGGTCGGTTGCCGGAAAGCTCTCTGTCTTTGCTAACGGAGTCATGA Gene GeneID:532778|ARFGAP3:NM_001075974:183_cdna UTR3_Alt 2 NULL GeneID:532778 5 GENE ARFGAP3 MGC137888 ADP-ribosylation factor GTPase activating protein 3 EMBV3_15580 CTCCAGTCCTGCAGTTTGACCACCTCCTAGCCCAAGAATCCAACATCTCATGGCAGGATA Gene GeneID:538609|HEYL:NM_001024565:236_cdna Constitutive 0 NULL GeneID:538609 3 GENE HEYL MGC134303 hairy/enhancer-of-split related with YRPW motif-like EMBV3_31960 CCTGCATGTAGCCTGTGTTGTACAGCAGAAAGATGCCAGACAGTGGTTTGCTGAGCTTTC Gene GeneID:509717|CCNC:NM_001034358:2_cdna UTR3_Alt 2 NULL GeneID:509717 9 GENE CCNC MGC126915 cyclin C EMBV3_10703 CCTAAAGTACAGCTTTCAACTGTCCCCAAACCAGCAAGAAATAGTATAATTGATGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15722 TCCCACAGATGAGTCTGCCACCCTGCTCCCTCTGACGAAGGATGTCCACTCTTTTCTAGA Gene GeneID:515049|NECAB2:NM_001098977:41_cdna Constitutive 0 NULL GeneID:515049 18 GENE NECAB2 MGC166237 N-terminal EF-hand calcium binding protein 2 EMBV3_25180 GCAGAGCCTAACTCTTCCCAAAATAAGCAGACACTTCTGGTGGAATTTCTGTGGAGCCAC Gene GeneID:532606|TASP1:NM_001034577:14_cdna UTR3_Alt 3 NULL GeneID:532606 13 GENE TASP1 C20orf13 MGC139584 taspase, threonine aspartase, 1 EMBV3_10115 CCACATGCCTGCCGGATCCAACCTCCTTCAACTGTGAGAATGGCTACATCACCAACTACA Gene GeneID:100139771|LOC100139771:XM_002688909:199_cdna Constitutive 0 NULL GeneID:100139771 7 GENE LOC100139771 NULL similar to MGC81990 protein EMBV3_14597 ATACATCATGGGTGATGATTCCTCCAACAGCTACTTCCTGGGAGGGGTCCTGATCGTCCT Gene GeneID:787155|RNFT2:XM_002694512:415_cdna Constitutive 0 NULL GeneID:787155 17 GENE RNFT2 TMEM118 ring finger protein, transmembrane 2 EMBV3_19372 TTCAGCATAGTCATGGCACTTCAGCAGGGAATCTGAGTATACTTTACAGACAGAGTGAAC Gene GeneID:613265|ZNF148:NM_001033121:89_cdna Constitutive 2 NULL GeneID:613265 1 GENE ZNF148 NULL zinc finger protein 148 EMBV3_31591 CCAGTGGGCCCTGAAAACCGTGGAGGAATGTTGATAAGAGATGTTGGACAGAAAGAGGAG Gene GeneID:616474|SLC47A1:XM_002695865:347_cdna Constitutive 0 NULL GeneID:616474 19 GENE SLC47A1 NULL solute carrier family 47, member 1 EMBV3_34919 CTGGCATCATGGGTTCAATGCCTATGTGGTATCTACTCCTTTCTACAGAACATTCAGAAC Gene GeneID:617724|C14H8orf46:NM_001076475:34_cdna Constitutive 2 NULL GeneID:617724 14 GENE C14H8orf46 C8orf46 MGC139854 chromosome 8 open reading frame 46 ortholog EMBV3_00492 AGCGCGTTCAAACTGGCTGTTGTGTGGTTTTGACTTCATTTCTCCTTTCCAGGTGTTCAG Gene BVT0102_213898 + 0 NULL GK000002.2:129942091-129969268 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103990 TCONS_00103987 TCONS_00103984 TCONS_00103985 TCONS_00103988 1 XLOC_062264 Coding TCONS_00103990 XLOC_062264 Coding Coding E2F2 2:129928671-129945275 j TSS77104 4121 1 TCONS_00103990_1 220 6 0.752153225320725 8.52580491791269e-07 0.000115171553546194 8.6279082780036e-11 0.000598383639232049 0.000442001109874401 0.000160629179069668 0.000282082486366195 0.000190678058624945 6.50714198288201e-06 0.000240665466679904 1.46155497141456e-06 0 0.000202810345005411 1.80107166345871e-05 0.000103801948182271 0 0 7.30112742685713e-05 0.000519477567017203 0.000786125853518151 0.000518971321027242 8.68096282362135e-24 4.32242894303204e-28 0 0.00059171023484067 0.000426358768496675 0.000324272193175458 0 4.66638292781954e-06 0 XM_869196.3 E2F2 PREDICTED: Bos taurus E2F transcription factor 2 (E2F2), mRNA. 0.0 6964 100.00 0.936665857801504 NM_004091.3 E2F2 Homo sapiens E2F transcription factor 2 (E2F2), mRNA. 0.0 1308 80.11 0.358650812909488 TCONS_00103990_1 sp|Q14209|E2F2_HUMAN E2F2_HUMAN Transcription factor E2F2; 2e-120 353 83.64 0.995454545454545 0 coding 0 0 1 0 -0.0932552226439467 0.399484837550779 0.0161139701504498 0.810204016850663 ACAGGTCTGGGCAGGGCTCTGACATGAGTGGTCACTCCTTAGCCGTATCATCTCCTGAGTGAGTCTGAGGATGGGGTTCTGGATCTGAACTGGGCTGCCGAAGTGCTGGACGTGCAGAAGCGGCGCATCTACGACATCACCAACGTGCTGGAGGGCATCCAGCTCATCCGCAAGAAGGCCAAGAACAACATCCAGTGGGTGGGCAGGGGACTGTTTGAAGACCCCACGCGGCCTGGGAAGCAGCAGCAGCTGGGGCAGGAGCTGAAGGAGCTGATGAACATGGAGCAGGCCCTGGACCAGCTCATCCACAGCTGCTCTCTGAACTTCAAGCACCTGACGGAGGACAAGGCCAACAAGAGACTGGCCTACGTGACGTACCAGGACATCCGTGCTGTGGGCAACTTTAAGGAGCAGACGGTGATTGCGGTCAAGGCCCCTCCGCAGACTAGACTGGAGGTGCCTGACAGGAGTGAGGAGAACCTGCAGATACATCTGAAGAGCACACAGGGGCCCATCGAGGTTTACCTGTGCCCAGAAGAGGTGCAGGAGCCCCACAGTCCTGCCAAGGAGCCCCTCCCCTCCACTTCCGCCCTCAGCCCCAGCCCTGACTCCACCCAGCTCAACAGCAACAGCGACCCTGGGATCACGGAACCCACGGCATCCTCAGAGCCAGCACTGACGTCCCCGCAGGTCCCGCCGCCACCCCCGCCGCCCCTTGTCCCCCTGGAGGCCACGGAGAACATGCTGGAGCTGCCGCATCCGCTGCTGCAGCAGACGGAGGACCAGTTCCTGTCCCCAACGCTGCCCTGCAGCTCCCCTCTGATCAGCTTCTCCCCGCCCTTAGACCAGGATGACTACCTGTGGGGCCTGGACGGCGGGGAGGGCATCAGCGACCTCTTTGATACCTACGATCTCGGGGACCTGCTGATTAACTGAATTGGCACTGCCTGCACCCCCCACCCCACCCGGGGCAGCCCGGCCCGTTTCTACCTCCTCACAGGATGTGAGACATGAGGTGCTGCCCTCGGGGTGGAAGGGTTCCCCCGTCCCCTTTCCTTTCCCACCCACCTGCCAGTCGACACTGTCCTGGAGGTGGAGGATACAGGGTAGGAGCCCAGCAGGGGTGGGGCCCTGTCCTTCCTGGTGGAAGCCGGGCCTGGGAAGGCCTAGTAAGTCTCCTGATCTCTGACCTCTTGCCTGAAGGGCTCCAGAGGAGGGGACTGGGTCTAAGGAGAGGCCTGGTGACTACCTTTTTGAGGGGCCACTATGACCCTGTTTATCGAGAAGCACTTAATGCCTTTGTATTTATTGCAGGTTGAGTTTTGTTTGTCTGCCCTCCCTGAGTTTTAGCAGGGAGGTGGTTCTAGTTTCTAGTAAGACTGCTCCTCAGACAGGCCCAGTGCCGTCTGCTGTCCAAGGGTAGGCTGGGCCTTCCAGGGGCCCAGGTCAAATCCCCAACTGCCCCCAACACGGTGGGCTGGGCCCGAGGGCCTGTCCAGTCTTCTGGAATGCCAATTGCACTTCAGCCTCCTCACTCCAGCAAGAGGGTGCTGCTGGATTCCTGTTCTCTGTCCCAGAGCTGGGGTTCCCACGGGCTTAAGCCCAGAAGAGCTTCTGGGGAAACGGGCAGGAACATGGAAGCGGGGGATGTTGCTTTAGGCACCTTTGCTCTGTGGTTGCCTCTCACTGGGACGGGGGGCTGTTTAACACTGAAGACCTGGGAGGCAGAGGCAGCCTCACTGTAGACAAGGGTGAGATTAAAGGAAGAAACTGCCAGAAAGTACCTCTTGCCGTAGCTGCTGGTATGGCAGCTGCTGGTATGGGCCTCTCCGTCCCAGGAAGCATTTTTTTTTTTTTTGCCCATTCGTGGAAGGGGATGATTCTTTAAGGACCTCCCCTTGCCCCCAGCTCTCACACAGACCCACCTAGGGACAGAAGTGACCATGGCTTGATGGCACATTGGTTCCTTTTGTCACAGGATGTTGAAAGGGTGACAGGGAAGGGTCTTCATTGCAGACCAGACATTGGCAGCTAACCAATGGGGAGATGTGCTCAGATTACCTCTTCAGGCTTGGGGTCCTATTAATAAGCTGGTCTTTTGACCTCCTCCCCATCCTCCAGAGGCTGGACCATCCCACGTTGTCCATATAGCCCAGCTGGGTAGCAAGGAATCAGCTCTCCTCCCCACTCAACTCGGGGTGGGGGTGCTCTGGGTCGAAGCCAGGCTGTGCCTTCTGGAGAGAGGCAGCCCGGGGTGGTGGTGGTCTGAGACCCACTGCCCACCCTCGGGCAGCTAGGTTTCCTCAGGGGCTCAGCAGGACAGCACTTTTTTGTTTTTTAAGTTTGTAGCATTAAGTTGGTTTCAAATATGAAGTTGGCTCCGTGGGGTTGCTCCCGAGCTGACCTACTGGCATCTGAAGTTTGGAAGGTGGGCTTCTTTGGGGGTGGGGTCCGATGTGAGCTAATGCCCAGCTGGGGACAGTCAGGCCTTGTCATTGGCTCAGCTTCCTGGTCCTCAAGTCAGCACCCTCTCAGGAATGGTCCCAGCTGCCCCAGTCTATAACAGGGCTAATTGTTTGCCTTTTACAGAGGTGTGTTTCGTCTCCCCTCTCCTGATACTCACAGGGGTCTCAGCAAAAGGCAGTTTGGAAGCTTAACATGCCCAGGGCCAAGGGACTCCCCCTGGGCCCTTGGGTGGAGGAAAGAGGGTCATTCCTGGGACCTGGTTTGGAGCGTGTGGGGCTGCAGGTGGCATGGCTGTTGTGAGGTGGTTTAGCCACGTGCCATCTCTGAGGATGGAGACCTTTGCCTTCCAAGCCTGGGGTGCTGGCTGGAGCTTTCTCCTAGAATTAAATGAGAGAAAAAAGGAGAAGAGGCTGGCAGGACCCACCGGGAATGAATCTTATGGCGAAGTCCAGCCAGAATTGAAGCTCATTCCCCAAAAGCCTAGCCACAGGGCCAGACAGAGGGGCTGCCCCTTGGGCCCATGGCCTGTATCTAGAGCAGCTGCCCCTGCGCCTTCCCATCTCCACCCCTCCACACCCGGCCTGGCCCAGGGCCTGGACCACCCGGGCTAAGCTTCGGGTTCCATGCAGGAAACAAGTTTGTGCCTCTTTCTTGCCAGTGATGCCTGAAACCTCCCAAGTTCCATCAAGTGCATTAAAAAGCATTTTGAGTGGAATTCCCTTTAGGGGCCCAATAAACTTTAAAACCAGGGTAGAAGAAAAGCCAGTTTCTTTCTGAGGTACTTTATTTCTGCCAGGAAATTTCCCAGTCCCTCTGGCAGCACCCCTCCCCCGACACTTGTGCCCCCAGGGGCATCTAAGGCACAGGGGCTGCTGGGAACCCAGTAGCATTAAGTCACCTGGTAGAGTTGTTCGGAGATTTGAAGATATTTCTTAAAACCAGCATAGCCTCCCTTCTCCACGGCCACGCTGTGGTCTGAGCAGCGCGGCCACAGGGAAGAAGAGGAAGAAGGTGCAGCGCGTTCAAACTGGCTGTTGTGTGGTTTTGACTTCATTTCTCCTTTCCAGGTGTTCAGTCTCAGTTCTGTGCTGTGTTTAGTTCTTAGTGAAAGAGTTTGGGTGTTCCTGTGTCCGAGCATTGTGTGGCTTAAAGCATTTGAAATGAAAGCCTTCTGGGGTTGTTTGCAAGCAGCTTTCTGGTTCTCGTCACTGTGTCCTGAAGTCCCTGCCTCATCCTTGGGGCCCTCGATGAGCAGAAACCTGGCCAGCCTGCTGGCTCCTGGGTGGAGCCTTGGACGGGACACCAGTGTCTAGAGGGAACCTAGTCCCTGTGCTGGGATTCCATGCGGGTCACTTACCTCCAGCCTGGTTTCTGGTCCTGCCTTGACGAGCACCGTGTTAAAACCTCCTCATATTGTGATGATTGGGCATTAAATGACAAACCTCAGCCGCTTGTCTCTTGTGCTTTCTGAAGGTCATTACCAAGGGTGGGTCTGGTCCTCCCAGGTCGGGGGTGGGGACTTTTTCTGACCAACTGGCTGATCCAGCTCCCCAAAACAGCCTCCCTTTTCTCCACTGGCTTATTACCATGCCTGAAATGTCCCCACTAAGACACAAAGTTTGCAGCACCCAGATCTAAAATGTGAACCCCTGCTC EMBV3_40547 ATCTCTCTGGCACTGGGATGCCTCCACAGACGGACCTGAGAAGTCATCACTCTTTCACCA Gene GeneID:520174|NUP43:NM_001103096:2_cdna UTR3_Alt 2 NULL GeneID:520174 9 GENE NUP43 MGC142987 nucleoporin 43kDa EMBV3_14794 TCTTCTAAAAGAAGTTCATTATCATACAAGGTTGGCTTTGGAAACATTTTCACTTGCGGT Variant GeneID:768015|PIGF:NM_001077074:188_cdna 278^369 1 EMBV3_43058 GeneID:768015 11 GENE PIGF MGC133893 phosphatidylinositol glycan anchor biosynthesis, class F EMBV3_42648 GGCATGCGGAATCTTCTAGTTTGCATAGGAACTCTCTAGTGGAGGCATGTGGGATCTAGC Gene BVV0102_070677 + 0 NULL GK000019.2:62575987-62614365 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094902 TCONS_00094903 1 XLOC_057582 Coding TCONS_00094903 XLOC_057582 NonCoding Coding LOC100848908 19:62603239-62605238 j TSS70891 887 1 TCONS_00094903_1 59 0.171364148816234 3 0.557557557557558 0 2.83213434249004e-06 2.08657989355818e-05 0 5.56616154166093e-06 0 0 4.00094245585019e-05 0 9.27736363018834e-06 3.87122565667041e-06 0 0 1.06065565032031e-05 5.45138365048026e-07 0.000538680862253881 0.000352509289392745 4.24310854262649e-05 2.02111050894899e-06 0 1.7112343322458e-06 0.000802316051358851 2.58570601681978e-05 0.000472508606967875 2.60371431619962e-06 0 5.50465189870188e-07 2.16576783417232e-05 2.09800829432472e-05 1.69454970318238e-05 XR_238888.1 LOC100848908 PREDICTED: Bos taurus uncharacterized LOC100848908 (LOC100848908), 0.0 1600 100.00 0.998872604284104 NM_003835.3 RGS9 Homo sapiens regulator of G-protein signaling 9 (RGS9), transcript 1e-17 95.1 93.55 0.068771138669673 0 noncoding 0 1 1 1 0.125076471608231 0.282181421694941 0.0203386971404269 0.795011065428953 CCCAGGGGCCAGGATGACTATCCGACACAAAGGCCAGCAGTGCAGGCCGAGGATGGCGTTTCTGCGGAAGGGAAGGCGACTGAGGCGAGTGAGGACCAACACTGGAAGAACTGTCGGTGTGACACAACAGTCTCCTTACAACGGTCTTAGTTGTGGCATGCGGAATCTTCTAGTTTGCATAGGAACTCTCTAGTGGAGGCATGTGGGATCTAGCTCCCTGATCAGGAGTGTCACACAGGATCAGGCCCCTGCATTGGGAGTGCAGAGTCTTAGCCACTGGACCACCTGGGAAGTCTCTGACTAGAACTTTTTAAAGGGAACCATTTAAGTAGTTCCTTTAGAGTTTGGTTGGCATGGGTGTGTCCTCTGGAGCCAGGTTATCTCTGTGGGAACTGTGTAGGTTTCTGGCCGTACAAGATGGAGGGGCAGACAAAGGAACAAGGACACAGTCATGTCTTGTTACTGTCGTCCTTTGACAGGTCTTGCTTGAAAGTGCAAGTTTAGTAACATACTATTAATAGTAAGTCACTTCAAAGCTCCCCTTGATAGAGGTTTGGGCCAAAACTGCCTCATTGATTCTGTTGTTATTTCAGTATCTACATCATCGTGAATAAAGCTGAAGAGGTTCCTTGTACCCAATTTTATTCTATAATGTTAGGGCAAGTTTCCAGTGAAAGTTACTTCATGCACACATACAACAGTTCTTGAGTGTTTCTTAGCAACCTTCTATTTATCAGAGGAAATGTTAATCATGTTTTACTAAAGTAGGTCCTTGAACAAATTTCCGAGGTTTGTCATTAAGAAGCCCTGAATTGTTGAATTTCCACTTGGAACAATTTGTATTTTTTCCATGTAATTGTTTCTATATTTTATAAATAATTCATTGA EMBV3_17492 GGTCCCAAATCCACACCCTTTGACTGCATGTACTTTCCTGGCAGAAGCCAAGATCCTGCA Gene BVT0102_299086 - 1 EMBV3_00927 GK000007.2:74474260-74662602 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04316 GGCACTAAGCCTATTCTGACACCGCTGGTCTGTAGTACCAGAATTCTGTTTTGTTAACGG Gene GeneID:508410|ARIH1:NM_001081714:95_cdna Constitutive 0 NULL GeneID:508410 10 GENE ARIH1 MGC148912 ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) EMBV3_22842 GCACTACCGAGTAAGAGGACAGACTTTTGCTTAGAGCAGGAGGCCCTTTATTATTGCTGC Gene GeneID:530070|LOC530070:NM_001083455:35_cdna Constitutive 0 NULL GeneID:530070 11 GENE LOC530070 MGC142520 hypothetical protein LOC530070 EMBV3_37035 CCTGAAGGCCTGGGGTGGAAAGAAGGAGAACCTGAAGGCTGCCCAGGAAGAATACGTCAA Gene GeneID:509566|ALDOA:NM_001101915:281_cdna Constitutive 0 NULL GeneID:509566 25 GENE ALDOA MGC166216 aldolase A, fructose-bisphosphate EMBV3_10408 GACGATGCTGATGGAGGGAAAATTCAATATCGTTATATACGTCCAGTAAACAGAACTGGG Gene BVT0102_012044 - 1 EMBV3_38994 GK000009.2:529555-636458 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38499 GGAGATGCTATACAAGTTTGAGAAGGCAGAATCTGAGGACTCTGGGGTCACTGAGCAGAG Gene BVV0101_044399 - 1 EMBV3_07918 GK000001.2:143204867-143211535 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31281 AGATACCACCCCTCTCCCCTGAGAACTGCTGCAGGATGACCTCTGAGCCCTTGTCTATAA Gene BVV0102_330446 + 0 NULL GK000018.2:26473033-26514590 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13664 GACTAAAGAATTTTTTTAAAGAATTTGAGTCAGAAGTGATAGTAGAACATATCCTAAATT Gene GeneID:785293|IPP:XM_002686420:380_cdna Constitutive 2 NULL GeneID:785293 3 GENE IPP NULL intracisternal A particle-promoted polypeptide EMBV3_38984 CTGCCCTCGGATACCCTCTTGCAACACCTACCAACTTACTTGTGTTTCTCTTACGTTGGG Gene BVT0101_048622 + 0 NULL GK000030.2:37055125-37571434 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34617 GAACCTCAAGTACTACATCCCAGAAGTTGTTTACACTGGCGTCTACCCGCCTTATGCAGG Gene GeneID:786446|LOC786446:XM_002700173:41_cdna Constitutive 0 NULL GeneID:786446 X GENE LOC786446 NULL similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 EMBV3_16473 AAACACAGGAGCCGGAGCAGAAGCAAAGAGAACCAACTTCTTCTTAAAACAGGCAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13654 GCCATTGGCTTGGTGCCGAAAGCCTACGTAATGGAGATGTATGATATTTGAGAGTCCTCG Gene GeneID:616545|SKAP2:NM_001038214:22_cdna UTR3_Alt 2 NULL GeneID:616545 4 GENE SKAP2 MGC128629 SCAP2 src kinase associated phosphoprotein 2 EMBV3_21054 GTACGTGAGTCCATTGGGAGAGGAAGTGAAAAGTATGAATGCCAGGGAAGCACAGTCTCC Gene GeneID:785375|LOC785375:XM_002695639:66_cdna Constitutive 0 NULL GeneID:785375 19 GENE LOC785375 NULL similar to ULBP27 EMBV3_09267 TTTCTATGTACTGCCCCTGGATGTGGCCAGATCAGACCCCAACACCAACAAGATTCTTGA Variant GeneID:509827|ATF2:XM_002685316:163_cdna 466^562 5 EMBV3_09265 GeneID:509827 2 GENE ATF2 CREB2 MGC142504 activating transcription factor 2 EMBV3_39153 GTAGAGATCCTAGAAGGCAAGGATGCCGGGAAGCAAGGCAAAGTGGTTCAAGTTATCCGG Gene GeneID:532203|MRPL24:NM_001034576:165_cdna Constitutive 1 NULL GeneID:532203 3 GENE MRPL24 MGC127920 mitochondrial ribosomal protein L24 EMBV3_07256 ACAATGATTCTGTGAAAATAGCTGAGGCCGAAGCCCATGATGGAGAGCAAGCCTTCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21312 GGGGGAAGATCAGGGAGCAGATGTGGTATTTATAAGCGCTGAGTTTGAGGCCTTGCAGTA Gene BVT0101_056762 - 1 EMBV3_32303 GK000012.2:19385305-19400263 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32588 ACGGAATGAAATGGAGGCTTTCAGCTGGACCTGGTTTTGTGTTCCAGCATTAGGGGATGC Gene BVT0102_060346 + 0 NULL GK000008.2:41577365-41745382 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225088 TCONS_00225101 TCONS_00225099 TCONS_00225096 TCONS_00225098 TCONS_00225100 1 XLOC_137686 Coding TCONS_00225088 XLOC_137686 NonCoding Coding - 8:41615857-41624165 - TSS168618 548 2 TCONS_00225088_1 37 2 0.934272300469484 0.00812779189521031 0.00587481477117137 0.00525350298400817 0.00251269829316279 0.00140551792461881 0.000977220660703189 0.000876393142847869 0.000751311341531528 0.000436047098530183 3.70741147431496e-69 5.5528652861666e-20 0.000104397951067456 6.40505868559215e-05 0 0.000190674240766155 9.63360424706723e-09 0 0 0.0105561761469873 0.0153536032247022 0.00481073594656576 0 0 0 0.00777589243738628 0.00977299443202087 0.00725853330980459 0 0 0 XR_231864.1 LOC101905543 PREDICTED: Bos taurus uncharacterized LOC101905543 (LOC101905543), 5e-135 484 100.00 0.487226277372263 0 noncoding 0 0 0 0 -3.73775322768772 0.0115286233483642 -0.00383588486480413 0.949462651137795 GGCAGGTGCCGGCGCTTCCAGGCCCCGCCCCTTCCCGCGGCTGGGTTTTGGGAGCGCCGGGCGGCGCGGCTCGGGGCGGAGGCGCTCGCACCTTGGCCGCGGCTCCCGCTCCCGTCCGGATCCTTGCTCGCGGGCACTTCAGCGTGCAGCTCTGCTTTGTCACCGAGGAGCAGCTCTGCGCCGCGGGGCCGCTCTCGCTGCGCTATCCGAAGTCTCTGCGGCTGGAGGTGCACCCGGCGGGGGAGGAGGCGGATGCGACGGTGACCGACGAAGCAGTGCTTTCATGATTTCTTGTGGCTTTCCAAGGAAGATATTTAACGGAATGAAATGGAGGCTTTCAGCTGGACCTGGTTTTGTGTTCCAGCATTAGGGGATGCACAAGCAGTGAAGCAAAAGCCTTTCCTCCCTCTGTCAGGCAGTAATGGAACCTCGAATGGGTGACAAATGGAAAATGGTTCAAGGCCCTTGTGTTTCACCAGAAGTGAAAACAGATGAAAAGACTTGTTTTTCTGGCCAAATAAAGACCTTTTAAAGATCCCTTTCTTTCC TCONS_00225078 TCONS_00225079 TCONS_00225080 TCONS_00225081 TCONS_00225083 TCONS_00225085 TCONS_00225086 s 3' 38361 TCONS_00225078 TCONS_00225079 TCONS_00225080 TCONS_00225081 TCONS_00225083 TCONS_00225085 TCONS_00225086 s 3' 38361 EMBV3_22414 CAACTCAAGACCCTAGGCTTATAATGATAGAGGGCATGGACCCATCCAATGAAATGCCCT Gene BVT0102_344079 - 1 EMBV3_33589 GK000017.2:64413469-64419025 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077764 TCONS_00077763 1 XLOC_047139 Coding TCONS_00077763 XLOC_047139 Coding Coding ERP29 17:64416482-64426516 = TSS58027 3791 1 TCONS_00077763_2 258 3 0.622445928436161 1.66199948789355e-05 7.25150415567256e-09 0.00017317045402119 7.20103731095129e-05 1.24604108032783e-05 2.10146147046768e-06 1.81198103455961e-05 1.81085206731851e-10 5.83458615114427e-06 8.2114779889036e-07 1.74576752820357e-06 2.92783846709023e-06 3.70197403751501e-05 3.65045157071471e-06 4.56433805241374e-06 0.000820984285711634 0.000262711707090099 0.000535907075385774 1.25625930418196e-05 0.000265988873706388 3.66948737598261e-06 0.00112966555913524 0.00103381177361855 0.000330110771059103 4.16337798545373e-06 7.28625201412255e-05 1.25932801447768e-05 7.46117284852618e-06 1.42435333414221e-05 2.41287994629883e-05 NM_001076271.1 ERP29 Bos taurus endoplasmic reticulum protein 29 (ERP29), mRNA. 0.0 2228 100.00 0.325507781587972 NM_006817.3 ERP29 Homo sapiens endoplasmic reticulum protein 29 (ERP29), transcript 0.0 1350 81.91 0.354260089686099 TCONS_00077763_2 sp|P81623|ERP29_BOVIN ERP29_BOVIN Endoplasmic reticulum resident protein 29; 0.0 523 100.00 0.996124031007752 2 coding 0 0 0 0 0.0334796494668183 0.851691911186046 0.0382613891461652 0.513472807493774 CCGCCCCTCACGTGGCTCCTCCCTCTCAGCCTAGGCCGGCGTGTGCTTGGTGGGCTGTACACGTGCGCGCACCCGAGCCTGGCCGCCTAAACTTCGTGGTCCCTGGGTCAGCGTTTTCTCCACTACAGCCTTCCCAGCACCTACTGCCAGAATCCGGCGTTATGGCTGCCGCCATTCCCCGCGCCGCTTCTCTCTCCCCATTATTTCCCCTTCTGTTCCTCCTCTCCGCGCCGCAAGACAGCAGTGGCCTGCACACCAAGGGCGCCCTTCCCCTGGATACAATCACTTTCTACAAGGTCATTCCCAAAAGCAAGTTCGTCCTGGTGAAGTTTGACACCCAGTACCCCTATGGTGAGAAGCAGGATGAGTTCAAGCGTCTGGCTGAAAACTCAGCTTCCAGTGATGATCTCCTGGTGGCAGAGGTGGGGATCTCAGATTATGGCGACAAGCTGAATATGGAGCTGAGTGAGAAATACAAGCTGGACAAAGAGAACTACCCAATCTTCTATCTCTTCCAGGATGGGGACTTTGAGAACCCAGTCCTGTATAGTGGGGCAGTTAAGGTTGGAGCCATCCAGCGCTGGCTAAAGGGACATGGGATCTACCTAGGTATGCCTGGTTGCCTGCCTGCATATGACACCCTTGCTGGGGAGTTCATCAGGGCCTCTGGTGTGGAGGCCCGCCAGTCCCTCTTGAAGCAGGGGCAGGACAACCTTGCGAGTGTGAAGGAGACTGACAAGAAGTGGGCCGAGCAATACCTTAAGATCATGGGAAAGATCTTGGACCAAGGTGAGGATTTCCCAGCATCGGAGATGACCAGGATCACCAAGCTGATTGAGAAGAACAAGATGAGTGATGGGAAGAAGGAAGAACTCCAGAAGAGCTTAAACATTTTGACTGCCTTCCAGAAGAAGGGGGGTGAGAAGGAGGAGCTGTGAGAAGGCACTCCAGGGTTTGGTGGGGTGGGGAGGGGTAAGTTACCTTCTGGCTGTGAAACTCTCCTGGGATATAACGGAATTTTAGGAAAAGTGGCATGAAACCAGAAATCTGAGCATGCGTGGATACTGACGCTGACGTGACTATGCTTGGAACATCTCTGTAGCCGGTCGCGGACAGCTGGTGAACACTTAGATGGCTTTTGAAATTCCCCCTCAGAAGGAATTGGTGCTATAAAGAGGAGTATACTGCCCAGGTTCTTGAAAGGTATGATTCTGATCCCAATTAAAGTTTCTGTGTTTTCGTTAAGTAGACCTGTAGCCATTCAGTTTTCTTTTACAAATTATACTTTGGCCTGTGGCCTACTTTTTCCTTGAAACTTATTTTTTTTAAAGCTAAGGTGGTGTGGAATCTGCTCTACCAGGGTAACAGACTATCCTGGTAACTCTGTGGAAACTAGGCTGAGCTCAAGACCTACCTTTAATTTCCTTTCCACAGGTGTTCAGATTCAGGTGGACTGATTGCAGCTGATTGAATGCATTGTCCGTTTTCTGGTCCTTGAAGTTGAATAGCAGTAAATTCTTTCCCATGCTCCGTGAGATACATATAACAGATTCTTAGTTTTACCAATATAACCTGGTAGGTTTCTTTAAGAGTTGCATTTAGACAGCTAAATGATATAACTCAGTTCAATTTGAAAGTTTCTTTAGAAAGGGATTGTTTTCCATCTAAATCACCTTGTCGCTGTTGATTACTCAGTAACCACCAGCTTTTTAATAAGCAGAGTGGGAGAGCACTGTACTGACTTTCAAATCTCTTCTCACACTTCCATACTTAACTATTTGAAAATATCAAATGGCAGCTTATAAAATGTCTAACTGTACCCACACAAAGAAATTTAAGTTGAGCAGTGTTGGCAAGTAAAACTTTCAATTCTTTGTTCCTCCATTTCAGCCAGATTGGGTATTTAAAATCACTGGAAACAAAAAATACAGCAAAACTCATGTGTTTAATTGGATGGCACAACAACAACAAAAATCCCACAGCTTAGGCTAACAATTCAAACCAACTAGATAAAAAATGTTTAAGCCTAAACACCTGCCCATAGCCAGCATGGATACTCTCAATATTTGACAAAAGAAGAACTATTTAGATATTAGGCCCAATAATTTCAATATATCCCCTACTCATCATTTCAGTTCTAACTGAAAAATCTGGAAGATCTTTTTCCATGCTTCTCACTGGTAAACTTGTTGAGCTGTTCTAATTTTTTCTCATCTACCTTAAAACAGTCATTTCCAAAGAATGAAGTATTCATTGTCTTATAGAAATTAGAGTAAGACAAATGACAGGTAGAGAAAGGACTCTAAAACTAAATTCAGTCCTTGAACGTGGTCCCATTTCTCAACTGTAAGGGGAAAGATAGAAAAGTGGCAACCCACCCAAGGGCATTTCATTGGATGGGTCCATGCCCTCTATCATTATAAGCCTAGGGTCTTGAGTTGAAGAAATGAGGGCTGTTGGATAGGACTGGATTGTCATACATCAAAGACTCTTTGCATAAATATTTTTCATTAAAGGTAGGCTGTGTTTCTCATTTAGAATCTGCAGTGATTTGTATATGCCACACAAAAATCTTCCCTAACATGTCCAATGGATTCCTTCCCTCTACTTCTTAGCATATAATTACTAATATTCTGTGGCTCAGATGCTACTAACTAGACTGTAATAAAGGCTATGGCTTCCTACCATCAAATGCTACACAATTTTTAAGGGAATTTCCAGATAAACTGAAGCACAATGAGCCCCTGGAGCCAACATGAGTCCTGTTCTAAAGAACCTGCAAGTTATCTCAAATAGTGCCAAGGGTAATTTTACTAATAGTCCTTGGTAATTGGTGGTATACACACACACACGAGGCATTAGAATTGCTTTAAGAAAGAATGGTTCTTCAATAGAGAACTAAGATAGAATCAAGATGAAGAATGTGAGGTGGGGTGGACACTCTGATTTTTAGCTCATTTCATCAATGCTTAAGAGTTTGAATCTTACCCATCCCTTACCTTACTGCCTGGCCTTAGTAGCCTTATCGGCAATAACTGCTTTTCTCACCCGTAAACAGTACATTATCTGGGACCCACTTTTACTAGGTATGTGGAAGCTGAGGTTGCAAAAAACCTGTACACTCAAGCATAAACACGGGTACTCCACAAATAATTTTTATAAGCATTTGGCTCATGGTTGCTTACCCTCCGCTTGTTACTATGGAATAACATGCCTGCATCGAGGCGGTGACAGCATCTCAAAAACAGGGAACGTGAAAAAAAATATAAACCTGAGTCCACCTTTTGAGGAACTCAAAAATGGCAGTGAGAAACAGCCAAGTGCCCATTTTTTTGTTAAAGGGGAAAAAAAGAAATGTTGAGGTGGCATTAATTCATACCTGAAGAAGCAAAAACTGACTTTTCCAGGGCTCAGTTAAGGGCATTTAATATCACAGGACAGAAAGGAAACTAGGAAGAAAAACAGCTCTTCCCACTGTGTTGCATGTATGAATAAACGTTTGATCTCAGCCTGTATGTTCATACACTCTTGGATAAAAAAACCATGTCATCAGCCTGCCTGAAATCCTCCAGTAACTTCCCACTAAATTTAGAAATCTCATTCCTTCCCCAGGCTACAGTTTCCTGATTGCTCTAATCCCCACTCCACCTTCTATCTCAGTCTGTACCCCTCTTCCACTCCGGTAAGTCCCAGGCACTTGAACCATTTTTCCCAGTCACTGGAACATGCCTTTCCCAAGGCTGATGCTTCATCATTCAGGTCAGATGGCGCCACCTGAGAGGTCCTCTGGT EMBV3_06235 TCCAGCAGTACATGGTGACCCTGGAGAACCTGCTCTTCACTGCTGAATTAGACCCTCACA Gene GeneID:100124428|NCBP1:NM_001102538:2_cdna UTR3_Alt 2 NULL GeneID:100124428 8 GENE NCBP1 MGC139394 nuclear cap binding protein subunit 1, 80kDa EMBV3_13883 CTTAACCAATTCAAGTTTTCTGTGATTCTACCAGGCAAACTGAAGTTTATGTTTCTATCA Gene GeneID:768246|FBXO16:NM_001078119:64_cdna Constitutive 1 NULL GeneID:768246 8 GENE FBXO16 MGC152102 F-box protein 16 EMBV3_37484 CTCGAGGCTGAGAAGGAACGCCCTCCTCTTGTTAGGAAAAGCGAGAACAGCACTTGCAAT Gene BVV0102_097280 + 0 NULL GK000012.2:79652129-79691578 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20773 CCCTCCCCGCCGCAGCAGCACCGGCGACAGTGAGTGTGTCCGCTTGAAACCCACCGACAT Variant GeneID:513775|ZBTB2:XM_002690337:11_cdna 147^331 1 EMBV3_14931 GeneID:513775 9 GENE ZBTB2 NULL zinc finger and BTB domain containing 2 EMBV3_21832 GCATGCTGTTGGCCAGGTAACTGTTGCAGAGAGGAAAATATAGACAGAAAGGTACTATTG Gene GeneID:531254|COL24A1:XM_002686308:205_cdna Constitutive 2 NULL GeneID:531254 3 GENE COL24A1 NULL collagen, type XXIV, alpha 1 EMBV3_19456 TTCTATCACTACTTCTACATGGTGACCAACACGCTCTTCTACGTCAGCTCGGCAGTGACC Gene GeneID:539336|NTSR2:XM_002691479:362_cdna Constitutive 1 NULL GeneID:539336 11 GENE NTSR2 NULL neurotensin receptor 2 EMBV3_19155 GGATTCTCTGTTGATGATCTTGGCTGCTGTAAAGTGATTCGTCACAGTCTCTGGGGTACC Gene GeneID:521533|MMADHC:NM_001034541:94_cdna Constitutive 3 NULL GeneID:521533 2 GENE MMADHC C2H2ORF25 MGC127500 methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria EMBV3_34525 CCAGGAAGCACCCAATAACCTCACCGTATGAGCTGACACTTCAAATCCTGGCTCCCCATA Gene GeneID:505805|LY6G6C:NM_001077856:69_cdna Constitutive 1 NULL GeneID:505805 23 GENE LY6G6C MGC155145 lymphocyte antigen 6 complex, locus G6C EMBV3_20300 AAAACACCACCACCAACCGATTGTTAGAACTGATAAAAATACAAAGGTCCAAGAGACCTG Gene BVT0101_075641 - 0 NULL GK000004.2:84733520-85436726 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03041 ATGATGGCCAGAAAGATGAAGGACACGGACAGCGAGGAGGAGATCCGAGAGGCCTTCCGT Gene GeneID:520277|CALM3:NM_001046249:250_cdna UTR3_Alt 2 NULL GeneID:520277 18 GENE CALM3 CALM1 MGC128137 MGC140648 calmodulin 3 (phosphorylase kinase, delta) EMBV3_11350 AAGCTTAAAACACTGAACACAGCAGAGGCTCCCATGCATCCTGGCTCTCATCTCTCCAGG Gene BVV0101_049227 - 1 EMBV3_00589 GK000010.2:82386495-82412751 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022651 1 XLOC_013321 NonCoding TCONS_00022651 XLOC_013321 NonCoding NonCoding - 10:82404611-82405145 - TSS16541 534 1 TCONS_00022651_1 110 0.316479400749064 1 0 0 0 0 4.66525582899507e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000174573157824502 0 0 0 0 0 0 0 0 0 0 0 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 2e-64 250 91.57 0.331460674157303 0 noncoding 0 0 0 0 -0.0107981341233313 0.934025667736878 -0.007401043877338 0.900311049231524 GAGCCTATGAAGCTTAAAACACTGAACACAGCAGAGGCTCCCATGCATCCTGGCTCTCATCTCTCCAGGCCTCCAGCCTCCCTCTCTCCCAGCAGCAGCAGAACCCAACACTCAGGAGATCCTACACATGGCAGAAGAGCCCACCATCCTGGTGCCCCAGGCAGAAACTCCAGTGATACTGGCAATACCAAGGCACCACTGACTCTAGAGGCACAAGAAGCCATAACAAGGCCTCAGGGTGACACCTCTGACAGAGGAAGTGAAGGGTATAAATTGGCAACACTCAATTCTAGCCAGAGGCAGCTCAAGCAAGAGAAACCAAAACCTTGTGCTATATAGTGCCACCTACTAGAAAACAGACTTTATTTTCTTGGGCTCCAAAATCACTGCAGATGGTGACTGAAGCCATGAAATTAAAAGACGTTTGCTCCTTGGAAGAAAAGCTATGACCAACCTAGACAGCATATTAAAAAGCAGAGACATTAATTTGCCAACAAAGGTCCATATAGTCAAAGCTATGGTTTTTTCCAGTAG TCONS_00018096 . 5' 255 TCONS_00018096 . 5' 255 EMBV3_29623 TGGTCATCTCACTGTGGAAAAACATCACACCTGAAGAATTGTTTTTCCCTCAGCAAGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21708 GCTCTAGTTATTGCTGCCAGTTTTCGGGCTAGAAAGGATATGTCACAGTGCTCACAAGAG Gene GeneID:783232|LOC783232:XM_002683976:2_cdna Constitutive 0 NULL GeneID:783232 Un GENE LOC783232 NULL similar to fertilin alpha EMBV3_02551 TGGGGGCCAAGGAGCTGAGCATAGATAAATATGTCGTGAACTGTAACCAGATGCCCACAC Gene GeneID:280909|REN:XM_002693902:242_cdna Constitutive 0 NULL GeneID:280909 16 GENE REN NULL renin EMBV3_39893 CAGATTCAAGGGTCCATTACTACAAGTGCTGACAAGGATGTGAGAAACGGGCTGCCATGC Gene BVV0102_402273 + 0 NULL GK000024.2:787216-795303 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138415 TCONS_00138416 TCONS_00138420 TCONS_00138422 TCONS_00138418 TCONS_00138419 1 XLOC_084623 Coding TCONS_00138419 XLOC_084623 Coding Coding TXNL4A 24:776291-790017 j TSS103706 3459 1 TCONS_00138419_2 130 0.495229835212489 3 0.748196721311475 1.1676609205202e-94 1.98466667684974e-09 5.22812760656993e-17 1.87352336173435e-11 2.38391458176475e-12 1.24917805578593e-14 1.56134476726567e-19 0.000271937565059331 6.98765791877199e-06 2.23035898429638e-09 1.22712551313398e-21 1.71229950012546e-220 1.95832648496091e-99 8.16931342668493e-10 4.97963344849152e-137 0.00137034210353258 7.46895929006227e-05 0.00231629902774566 1.9613253806118e-08 0.000166457748063565 8.08008484618149e-189 0.00190331046503227 0.000234861103287493 0.000416546519045113 1.82104781011319e-19 5.60309635184371e-12 5.20844951438125e-07 0.000218308657009071 2.08045280083794e-06 1.85783964508196e-06 NM_001076060.1 TXNL4A Bos taurus thioredoxin-like 4A (TXNL4A), mRNA. 0.0 742 99.76 0.119398670135877 NM_006701.2 TXNL4A Homo sapiens thioredoxin-like 4A (TXNL4A), mRNA. 1e-62 246 82.17 0.0734316276380457 TCONS_00138419_2 sp|P83876|TXN4A_HUMAN TXN4A_HUMAN Thioredoxin-like protein 4A; 9e-32 113 100.00 0.384615384615385 1 coding 0 1 1 1 -1.74332328744232 0.0315870365450313 0.0271942744656704 0.586194867985092 GTGGCCGGCGCTCACACCGTCTGGGAGACCTACGCGCCCGGAAGGACCGCTGAGCGGGAGGGCCCGGTGTGGGAGAGACCTGTCGGCTCAAGATGTCGTACATGCTCCCGCACCTGCACAATGGCTGGCAGGTGGATCAGGCCATCCTTTCGGAAGAAGACCGCGTGGTCGTCATTCGGTTTGGGCACGACTGGGACCCTACTTGCATGAAGATGGATGAGGTTCTGTACAGCATTGCTGAAAAGGAACAAGCACATCATGATCGACCTGGGCACCGGCAACAACAACAAGATCAACTGGGCCATGGAGGACAAGCAGGAGATGATCGACATCATCGAGACGGTGTACCGGGGGGCCCGCAAGGGCCGAGGGCTGGTCGTGTCTCCGAAGGACTACTCCACCAAGTACAGATACTGAGCGCGGCCCACCTGGTGCACGTGGTGCCCTGGGGTCGTTCTCATGTTGAAGTATTTTCAACTATTTAAAGCCTTTGAGAAAGCGTTTGGCAAAGTACGCGGAGCTTAAGGAGCTGGAGGGTTTTGCAGTGTGGGTGGCATTGCCTCGCCTTTCAGTCTGCCTGGTCACTGTATTTTTGTATCAGTAAATATCTGTAAATATCTAACTGAAATAAATACACAGTGATGGGGATGGTCAAAATTGTTTATTTACTAAGAAACTTAGTGTACAGATTAATGATTTTGGTAGTCAAGAATGGACTCTCTACCATTGAGTGAGGCTCAGTGTGTCTCATGGTTCCGGAGGCTGGAGTCAGATCCAGCTGTCAGGCTGGTCCTCCGGGGCCTGACAGGGAGTCTGTTCCCACCCCTCTCCTGGCTCTGGTGGTTTCTGGCGTCCCTTGGCTGGTGATGCTTCACCACAGTCCCAGCCTTCATCCTACACATTGTTCTCCCTGTGCGTGTGTCTGTTCAGATGTTCCACTGGGCAAGGGCTGCCCTGCTCCAGCACGACCATCTCCACTCATGACGTCTGCAACAGCCCCATCTCCACAGGATGCATTCTGAGGTCCAGGGGTGAGGACTTCCGGCACAGGAATTGTCAGGGACACAGCTGATCCCTCAATAGAACCAAAGGCTTGAGTTCAGGAAGAATACACACTTAACGAAAAGTTACATTTTATTCTGGTTATAAAAACAGTACGATAAAATAATGATTTTTGCAGGCTTCCCTTTAAAGACTAAGAGCTGATTCTTACACTTCTTAAGATCAAATCTGATGTGCGTACTGTATTTTATGTGGAAACCAGACCCTTCAATCCATGTAGCTACTTTCCTCCTCATAATCTCAAGTTCCTCTCCTATCTTGCTTACCCCAGCAGCATTTGTTAGTTGGGATCTTCCTGGGCACATCTCAGTGCACACAGACTACGCAGTCAAGAGTGGACGCCTGGCGTGGAGGAGCACAGGGAACTCTGGGGAGCACACCTGGAGCCCACACCTGGCTTCACAGCCCTTGGGCAAGTGCTCTCCCACGTGAAGAGGATGGTAGCGTCTGCTGTCTGACACCTGCTGTACTCAGATCAGTCACAGCATTCCCTGGGGGCCCTCTGCTGTGAAAAGGCTCACTGCCTCATCAGATTGACTCATTGTTGAAACATGAGTGTACTTACCAAAGAATGAAATTTTTAAAAAGCCACACACACACAAGTATGTGCTTTTAGAAACGGACATAGGGACTTCTTTGCCAATAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAATAGTCATCTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCAGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAAGAGATCCAACCAGTACATCCTAAAGGAAATCTATCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTTCAATACTTTGGCCACCTGATGTGAAGAACTGACTCACTGGAAAAGACTCTGATGCTGGGAAAGATTGAAGGTGGAGGAGAAGGGAACAACAGAGGATGAGATGGTTGGATGGCATCACCAACTCAATGGACATGAGTTTAAGTAAACTCCAGGAGTTGGTGATGGACAAGGAGGCCTGGTCACAAAGAGTTGGACACGACTGAGTAACTGAACTGAATTGATAGGGACTTCCCTGCTGGTCTGGAGGTTAAGACGCTGCACTCCCAATGCAGGGGGCTCAGGTTTGATCCCTGGTCAAGGAACTAGATCCCACATGCTGCATCTAAGAATTTGCATGCTATAACTAAAGATCCCAGTACAACCAAATAAATATTTTTTTTTAATGGATATAAAACTCAAATGCAAATATGCAGTTTAATGTCTCCAGTTTTAATTTTCCCGAAAATAGTATAATACTGTGTCATATGAGGTGCTAAAGAAAAAAAATGTGATCCTAAGTACCTGGCATATGAAAGACATTTGATAGTATACTTCTGACATTTATTCAAGCAAGACCATTAGCCAGTAATTACCTGAAAAGATGCTCACCATCATCAGTCACCAAGGGAATGCATATCAAAACCAGGAGATGACACTTGACACCCATGAGAATGGGTGTGAACAGATTCAAGGGTCCATTACTACAAGTGCTGACAAGGATGTGAGAAACGGGCTGCCATGCACTCTGGTGGGAAGGGACAGTGGTGCAGTCACTGTGGAAACCAGTGTGGCAGTTCCTCAAAAATACGGCGTGGAATTACCATCTGACCCATCAGAGGCACTCCTAGGTATATCTCAGAGATAAAACATGTATGTCCACACAGAAAGTTGGACACGAATTTTTATAGCAGCATTTTTCATGAGAGCCAAAGACAGGCATCTCAGACGTCCATCAGCTCCCCAGTGGATCGAACAGTGTGCTGTATCCATGCAGTAGACTATCACTTGGTCATAAGAGGGAATGAAGTACTGATGTAGGCTCCAAACTTGAAAACATTAACGTAAGTAGAAGAAACTAGTTGTTATGTCGTGTGTGATCCCATTTATAGGAGATGTCTAGAATGGGCAATGTCTAGAGACAGCTGATTAGTGTTTGCGTAAGACTGGAGGATGTGGAAATGGCAGTGACAGCTGATGGGTACAGGATTTCTTCTTAAGATGATGGAAATCTTGCAGAATTGTGTTTATACATGTCTGTGAATATATGAAAAATCACTGAATTGTATGCTTTAGTTGGATGAATTGCATGGCATATGAATTCTCTCATTGATAAAGCTTTATTAACAGAAAAACAAAAAACCGTACTTCACGTTTGTAAATTTATTATAAATTTGTTTTATTTACAAGTTGTAATAACTTCATTCGCATTTGACTTTAAAAATTATCTTTTCACTGGTGCTTTGTAAGTATAATATCACTGAATTATGATTTGGTCTCTATTCTATGTTTATGTCTTATTGTAAAAAGCTTATATCTTATTACCATCCACCT EMBV3_33021 AGCCTCAAGGCCCTGTTCTTTGGAGTCGTGGCCCCAGTGTTCTAATGGCTTGTTAAGGTT Gene GeneID:317696|FGFR4:XM_002689008:49_cdna Constitutive 1 NULL GeneID:317696 7 GENE FGFR4 NULL fibroblast growth factor receptor 4 EMBV3_15884 CTCCTGTGCCCCCCAATGGTTTTCTTTGCAAGTGCTTTTGGAACTAAGAAGCTAGTGTCT Gene GeneID:281597|ACTR3:NM_174226:11_cdna Constitutive 0 NULL GeneID:281597 2 GENE ACTR3 MGC142370 ARP3 actin-related protein 3 homolog (yeast) EMBV3_23701 AGGTTCTTCCCGCAGACCGGCTCTGGACAGGTGTGGGGCACCCACTGACAATGCCACGCT Variant GeneID:537773|GFI1B:XM_002691653:383_cdna 89^243 1 EMBV3_18471 GeneID:537773 11 GENE GFI1B NULL growth factor independent 1B transcription repressor EMBV3_21970 GGAGGCTGACGAGCTAGACCGGCTGGTGACAGCCGACCAGAGCCTTACCCAGGAAGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11340 CTGCATCGACGAGTTCGACAAGATGAATGAAAGCACGCGCTCCGTACTACACGAGGTCAT Gene GeneID:100336521|LOC100336521:XR_084099:14_cdna Constitutive 0 NULL GeneID:100336521 27 PSEUDO LOC100336521 NULL minichromosome maintenance complex component 4-like EMBV3_42344 TCAACTCGGGCGGCGTGCAGAGCCGGGTCTCTGGCCTGGATGGTGTGGAGAAGTGGGCTA Gene BVT0102_397996 + 0 NULL GK000017.2:71014257-71015441 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078105 TCONS_00078108 TCONS_00078106 TCONS_00078109 TCONS_00078107 1 XLOC_047223 Coding TCONS_00078108 XLOC_047223 Coding Coding ZMAT5 17:71015048-71038221 j TSS58200 1428 2 TCONS_00078108_1 170 6 0.938632832729156 0.00064839147987887 2.3068282119524e-17 5.69590239334118e-20 9.23813589066341e-12 9.90111832344975e-20 2.27044931994458e-25 2.41239106576155e-17 1.74617195640348e-20 1.11420597256054e-55 1.18456246491124e-05 0.000117773176258199 0.00012635186593423 4.20811716786322e-11 5.425685472158e-05 4.5879909565622e-23 0.000488575654657063 5.16280145630392e-21 4.83186066509591e-05 4.57189082200881e-26 5.99176843949105e-25 3.37493912394368e-22 0.000134700373530644 0.000774664266834763 0.000108599585225697 2.39001666456846e-13 1.00034084790298e-14 1.15268475876414e-19 0.000322832129805616 0.000241319767077772 0.000243719273442874 XM_005218099.1 ZMAT5 PREDICTED: Bos taurus zinc finger, matrin-type 5 (ZMAT5), 0.0 1867 100.00 0.724089635854342 NM_001003692.1 ZMAT5 Homo sapiens zinc finger, matrin-type 5 (ZMAT5), transcript variant 0.0 746 91.75 0.364145658263305 TCONS_00078108_1 sp|Q2TA39|ZMAT5_BOVIN ZMAT5_BOVIN Zinc finger matrin-type protein 5; 3e-124 352 100.00 0.994117647058824 2 noncoding 1 1 1 1 0.00771786420075088 0.946117083788313 0.0199574482175003 0.778739015769319 CTGGGAAGGGCGGGCCTCTCCCCAACGGGAGGACTACGAATCCCAGCAAGCAGTTCACGGCGTGAGGGCGCCGGAGGAGGAGCTCGCAGCCGTCGGGCCCCGCAGAACCAGGCTGTCTGGGAGCCTTCCTCCCCTGGCACAGGCCAGGCCCCCGGGGTGCCCCTCTGAACTCCAGGTGGGTTGGTGGTGTGCCCTCCACGCTCTGACCCAGCGCCCTGACCTGCAGGCAGTGGCAGCTCCCAGCGCGGGTCACCATGGGGAAGCGTTACTTCTGCGACTACTGCGACCGGTCCTTCCAGGACAACCTCCACAACCGCAAGAAGCACCTGAACGGGCTGCAGCACCTCAAGGCCAAGAAGCTCTGGTATGACATGTTCCGAGACGCAGCTGCCATCTTGCTGGATGAGCAGAACAAGAGGCCCTGCCGGAAGTTTCTACTGACAGGCCAGTGCGACTTTGGCTCCAACTGCCGCTTCTCCCACATGTCAGAGCGAGACCTGCAGGAGCTGAGCGTCCAGGTGGAGGAGGAGAGGCGGGCCAGGGAGTGGCCGCTAGATGTCGCCGAGCTTCCTGAGGTCTGCCTGGAGGACTGGCTGGAGAAGCGAGCCAAGCGGCTGAGCTCCGCCCCAAGCAGCAGGGCCGAGCCGGTGAGAGCCACCGTGTTCCAGTACCCCGTGGGCTGGCCGCCAGTCCAGGAGCTGCCTCCGTCCCTGCGGGCACCGCCTCCTGGGGGGTGGCCCCTGCAGCCCAGCGTCCAGTGGGGCTGAGCCCCTCCTCCCTGCGTGGCGAGCTCACGCGTCGGCCACAACCAAGAGAAGAGCTCCTACGGCCGGACACCGAGGCCCCCTCCTGCTGCACCCCATGGAGCGCCAGAAACTCAAGCCCGGGCCTCTCTGAGGCCTGAGTGCTCCCTGCCCGCCCCTAGCCAGGTGCAGCCCTGGTCCTGACTCCGTGCCAGGCCGCTCCACGCCCACCCCCTCAGGAGACATCTCAGAGGACTTCCTTCCGGATGTTTATAAAGCAAGTCTGTCACCACAGCGGCGTGGCTGCCCTTGCCGCTCGCCTGGCGCCCTCCGCTCGGCGCTCTGGCCCTGGGTCGGGAGTTGGGCGAGGTGTGGTCCTCTGGGCTGACCGGTGCTTGGCGCCCTTCTCTTCCCTCAGGGGCCGGCAGAGGCTCAGCGCTGCCGGGCGGGACCAGTCCAGGCCAGGCGTGGCTCTGCATCTGGGGAGGAGAGCTGAGGACCGGGTCTGCCGGCCCGGCCCCCACGTCTGCCAGCGCAGAGCACAGGTGGCTCAGCTCGGGCGGCGTGCAGAGCCGGGTCTCTGGCCTGGATGGTGTGGAGAAGTGGGCTACCCCCAGAGGGTGGGCCCTGGGCTGGGAGAGCGGCCTGGCTAAGCGTCCCAGCACCAGCACCGACATGGGGGTGG EMBV3_19251 TTACCTCCCTCAATCTCTGCTCAGCCTGCACAACACATCCCTGTTGCCACTGAAACTCAG Gene BVV0102_421685 - 1 EMBV3_19357 GK000003.2:101813922-101816843 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174308 1 XLOC_104578 Coding TCONS_00174308 XLOC_104578 Coding Coding RPS8 3:101816373-101819403 j TSS129385 1082 2 TCONS_00174308_3 75 5 0.644437107956421 1.97011538089986e-26 2.12956765246567e-20 1.35588900148082e-05 1.15311997930644e-05 0.000126454878778371 5.35314194247288e-06 6.29905447289736e-05 5.0911298190009e-05 8.72472242006139e-05 0.00168672726447721 0.00161271358979624 0.000538504207409888 0.000271493984625827 0.00387691527513592 0.00031587176455544 0.0226459124800703 0.0134408370539439 0.0187299601563883 0.000356069417961653 9.26693862771349e-05 2.68145749647136e-05 0.00608403629094672 0.00801715910950608 0.0104776170708042 0.000175937313164339 3.16110621672205e-05 5.26704168538665e-22 0.00134445673703099 0.000512229688102051 0.00150680616549962 NM_001025317.1 RPS8 Bos taurus ribosomal protein S8 (RPS8), mRNA. 0.0 850 100.00 0.434380776340111 XM_005271099.1 RPS8 PREDICTED: Homo sapiens ribosomal protein S8 (RPS8), transcript 0.0 747 84.65 0.55822550831793 0 coding 0 0 0 0 -1.30135710051721 0.00870206078179431 0.0224573174592879 0.673528709487343 GCGTTTTCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACAACTGGCACAAGCGCCGTAAGACCGGGGGCAAGAGAAAGCCCTACCACAAGAAGCGAAAGTATGAGCTGGGACGCCCCGCTGCCAACACAAAGGTTGTACACGCAAGACAAGAATAATCGATGTTGTCTATAATGCATCCAACAACGAACTGGTCCGTACCAAGACCCTGGTGAAGAACTGTATTGTGCTTATCGACAGCACACCGTACCGACAGTGGTACGAGTCCCACTATGCACTGCCCCTGGGCCGCAAGAAGGGGGCCAAGCTGACTCCTGAGGAGGAAGAGATTTTAAACAAGAAACGATCAAAGAAAATTCAGAAGAAATACGATGAGAGGAAAAAGAACGCGAAAATCAGCAGTCTTCTAGAGGAGCAGTTCCAGCAGGGCAAGCTTCTTGCATGCATCGCTTCAAGACCAGGCCAGTGTGGCCGAGCAGACGGCTATGTGCTAGAGGGAAAAGAGCTCGAGTTCTATCTGAGGAAGATCAAGGCCCGGAAAGGCAAATAAACCCTCTTCTCTCCTGTCTTAGCTCATCTAATAAAGGCGTTTACTGTTCTATGCCATGTTCATGTTCTGAGAGTACTTCATTGTTTGGCACACTATAGAATGCCCCAGTTCCCCCTGCCTGAAGGCCAGGCCTGTTACGGGGCTGTGACTCTAGCCGGAGGAACAGTTCTCGCTCCTGAGGCTGAGTTTCAGTGGCAACAGGGATGTGTTGTGCAGGCTGAGCAGAGATTGAGGGAGGTAACCCAGCTTGGGGCCCCTGCAGTATTGGGCTGTTGCCTGGACCATCATTGGAACCAAAGCCATGTTGCCTCCCTAAAGTTCTTTTAGAGACCCTGTATGCAGACTTTGGTTTGGGGTTTTTTTCAGGCTCCTGGTCTAGAAACCTTGAAATTGTGTTCTACACTTAAGCATTGTTGAGCAAGTTATACATATTAATTATCTCTTGAGCTCTAATCCTTTCCCCTCTCCTTACTCAAAAGTTAGTTTGTTTAAATTGTTGAATTGGTTTCTTCAGCTTTCCCTTTT EMBV3_31119 CCGACATAATCTGTCACTGAACAAATGTTTCCTTAAAGTGCCTCGATCCAAGGATGACCC Gene GeneID:539458|FOXJ3:NM_001076162:257_cdna UTR3_Alt 2 NULL GeneID:539458 3 GENE FOXJ3 NULL forkhead box J3 EMBV3_01288 CATCTTGAACCTGGAGGAGCTGGTCACCAAGGCCGAGGAGGAGTTCTTCGATATCATCTT Gene GeneID:534479|DNAI2:XM_002696221:298_cdna Constitutive 0 NULL GeneID:534479 19 GENE DNAI2 NULL dynein, axonemal, intermediate chain 2 EMBV3_08148 ATGTGTGGCTACAAAACTATCGACAAGGAGTTCCTGGGAGTGCTGCTGACATTCCTGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26913 CTGACAGGGATGGTACCTGGGAGTGATTTTTCCGGGAGCCCCTACAGCCACCCTCAGTAT Gene GeneID:538371|PAX5:XM_002689717:22_cdna Constitutive 0 NULL GeneID:538371 8 GENE PAX5 NULL paired box 5 EMBV3_39971 CACCAGTCGGTGAGTGAGCAGATCAAGAAGAACTTCGCCAAAAGCAAGTGGAAGCAAGCC Gene GeneID:520498|CAMK1:NM_001076868:125_cdna Constitutive 0 NULL GeneID:520498 22 GENE CAMK1 MGC142688 calcium/calmodulin-dependent protein kinase I EMBV3_03549 TTTGCTGCTCTGCGAGGAAGTCATAGGGTACTCAGCAACGCCAGTGCCGTTCTCCTCTTT Gene GeneID:100296950|LOC100296950:XM_002696821:604_cdna Constitutive 0 NULL GeneID:100296950 21 GENE LOC100296950 NULL hypothetical protein LOC100296950 EMBV3_07641 GCTTGTCTTACTCTAAATCCAGATTTGTTTTAAAGTGCCGCCACTCTTCTAAAGATTCTG Gene BVT0102_173088 + 0 NULL GK000029.2:13581887-16686223 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164548 TCONS_00164546 TCONS_00164547 TCONS_00164549 TCONS_00164545 TCONS_00163173 2 XLOC_100256 XLOC_099814 Coding TCONS_00164549 XLOC_100256 Coding Coding - 29:13808595-13907481 - TSS123104 5440 3 TCONS_00164549_3 172 0.953676470588235 4 0.945027051625626 2.41313989342066e-06 0.000704553735103395 0.000335096956321717 4.06291363794572e-06 4.47581245069377e-08 9.8588965817955e-07 0.000178986740258719 0.000181131601748119 0.000302694345135734 2.52635136320203e-10 0 2.54723262425493e-10 1.82731105181881e-42 9.35598812887363e-39 4.60035413337846e-15 0 0 0 0.000693526924708842 1.00050123958227e-05 0.000362138226483959 0 0 0 0.00100543967843834 0.000718962103741688 0.000239899161123029 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1687 83.96 0.283823529411765 TCONS_00164549_3 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 3e-51 176 65.65 0.738372093023256 1 noncoding GTTTATCAAAGAAGCCGTGAGGGATGCGCCCCCTCTTCTGGTTTCTCTGGTAACAAACGAGCCAACCTGATGTCCATTCCGCCTCTAATTAGTAACCTCCCCCCTCGACCCTAGGAGCTAAGGTGGCCGCCATGTCCTGTCCGCTGTGGGTCCTACTCGGTGAGATGTCGCTCCAGGACCGTACTTCAGACAGAGAGGAAGACTAAAGCATAAGTTCTCCAATAAAAAAATAAGTTTTCCTCCAAGATGGATAACTAGGAAAATATGAAGGAAGCCTAGTACCAAGGATCATGATCTGGATCCAGGGCATGCAGCATTCACTCTGGCTTCAAGTTCTATAAAGGCTTCCCTGGTGGCTCAGTGGCAAAGAATCTGCCTGCCAGTGCAAGAGACACAGGTTGGATCTCTGGGTCAGGAAGATCCTTTGGAGAAGGAAATGGCAACTCACTCCACTATTCTTGCCTGGGAAATCCCATGGACAAAGGAGCCAGGTAGGCTACAGGCCATGAGTTAGACATTACTGAGCAAGTAAACAACATCAAAGTTTTGTAAATACTGTGGTTCACGTTCTTTATCAGATATGCTTTCCAAAAGTTTTTCCGTCTGTGAGTTATCTTTCATTTCTACAACAGAATCTTTAGAAGAGTGGTGGCACTTTAAAACAAATCTGGATTTAAAGTAAGACAAGCTTTATTTCCTATTGCAGTAGGGAAAACACTGGAAATCTGCAAAGAACTCAACATCAAGAAGAAAAATGGCTTTTTCTTTATACAGTGAGGATAAGAAGTGACGGAGGGGAAATGAGACAAAGTAGAGAAAACAATCAGTAGTACCTGATGGGGAATGTGTCTTTGCTGTGATCAGCCAATCCTTGGGATAAGCTCTTAATAATAAGGGGCTACATTCTCTTTTTAATATTTTCTCAGACTTGGGACCATCAGAGTTCAGGGAAATAAAAGGAAGAAAAAAGTCTAAGTGAAGTTTGGTTTTGAAAAGAAATGGGTAAAATATGGCCATTTGTGAACACTCAACCAGGATAAGCTTCCATAAGCCTCTTATCCTTATTGGTCAGAGGGCAGACAGAATGAAAACCACAATCACAGAAAACTAAGCAAACTGATCAGATGGACACAGCCTTGTCTAACTCAATGAAACTATGAGCAGTGCCTTGTAGGGCCACCCAAGATGGACAGGTCATGGTGAAGAGTTCTGACAGAACGTGGTCCACTGGAGAAGGGAATGGCAAACCACTTCAGTAGTCTTGCCTTGAGAACCCCATGAACAGTATGAAAAGGCAAAAAGATATAACACTGAAAGATAAACTCCCCAGGTCGGTAGGTGCCCAATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAGTGAAGAGACAGAGCCAAAGCAAAAACAACACCCAGATGTGGATGTGACTGGTGATAGAAGCAAGGTCCAATGCTGTAAAGAGCAATATTACATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGTAAATTGGAAGTGGTCAGACAGGAGATGGCAAGAGTAAACATTAACATCTTAGGAATCAGTGAACTAAAATGGACAGGAATGGGTGATTGTAATTCAGATGACCATTATATATACTACTGTGGGCAAGAATCCCTTAGAAGAAATGGAGTAGCTCTCACAGTCAATAAGAGTATAAAATGCAATACTTGGATGAAATCTCAAAAAAGACAGAAAGATATCTGTTCATTTCGAAGACAAACCATACAATATCACAGAAATCCAAGTCTATGCACCAATCAGTAATGATGAAGAAGCTGAAGTTGAATGGTTCTATAAAGAACTACAAGATCTTCTAGAGCTAACATCCACAAAAGATATCCTTTTCATTCTAGGGGACTAGAATTCAAAAGTAGGAAGTCAAGAGCTACCTAGAGTAACAGGCAAATTTGGCCTTAGAGTACAAAATGAAGCAAGGCAAAGGCTAACAGAATTTTGCCAAGAGAACACACTGGTCATAGCAAACAGCCTCTTCCAAGACAAGAGACAACTTTACACATGGACATCACCAGATGGTCAACACCGAAATCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAGCTCTATACAGTCAGCAAAAACAAGACCAGGAGCTGAGTGTGGCTCAGATCATGAACTCCTTACTGTAAAATTCAAACTTAAATTGAATAAAGTAGGGAAAACCACTAGACCATTCAGGTAGGACCTAAATCAAATCTCTTACAATTATATAGTGGAGTGACAAAGAGATTCAAGGGATTAGATCTGATAGAGTGCCTAAAGAATTATGGATGGAGGTTCATGACATTGCACAGGAGGCAGAGATCAAGACCATCTCCAAGAAAAAGGAATGCAAAAAGGCAAAATGGTTGTCTAAGGAGGCATTACAAATAATTGAGGAAAAAAGAGAATATAAAGGCAAAGGAGAAAAGGAAAGATATACCCTTTTGAATGCAGAGTTCCAAAGAACAGCAAGGAGATATAAGCAAGGCTTCCTCTGTGATCAATGCAAAGAAATAGAGGAAAACAACAGAATGGGAAAGACTAGAGATCTCTTCAAAAAAATAAGAGATACTGAGGGAATATTTCATGTGAAGATGGTCACAATAAAGGACAGAAACAGTAAGGACCTAACAGAAGCAGAAGCTATTAAGAAGAGGTAGCAAGAATACACAGAAGAACTATACATAAAAGGTCTTAGTGACCGAGATACCATGATGGTGCGATCACTCACCTAGAGCCAGACATCCTAGAATGTGAAGTCAAGGGGCCTGTGGAAGCATCACTACGAACAAAGGTAGTGGAGGTGATGGAATTCCAGTGAAGCTATTCCAAATCCTAAAAGATGATGCTATGAAAGTGCCGCACTCAATATGCCAGCAAATCTGGAACACTCAGCAGTGGCCACAGGACTGGAAAATGTCAGTTTTCATTCCAATCCCAAAGAAGGGTATTGCCAAAGAATGCTCAAACTACCACACAATTTCACTCATCTCACACACTAGCAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAACAGTACGTGAACCGTGAACTTCCAGATGTTCAAGCTGGATTTCAAAAAGGCAGAGAAACCAGAGATCAAATTGCAAACATTCATTGGATTATAGAAAAAGCAAGAGAATTCCAGAAAAACATCTACTTCTGCTTTATTGGCTATGCCAAAGCCTTTGAGTGTGTGGATCACAATAAACTGTGGAAAATTCTGAAAGAGATGGAAATACCAGACTACCTGACCTGTCTGTCTCCTAATAAATCTGTATGTAGGTCAATAAGCAACAGTTAGAACTGGACGTGGAACAACAGACTGGTTCCAAATCAGGAAAGGAGTTCGTCAAGGCTGTATATTGCCACCTTGCTTATTTACCTTATACACAGAGAACATCATGAGAAATCCTGGACTGGATGAAGCACAAGCTGGAATCAAGATTGCTGGGAGAAATATCAATAATCGCAGATACGCAGATGACACCACCCTGATGGCAGAAAGAGGAACTAAAGAACCTCTTGATGAAGGTGAAAGAGAGTGAAAAACTCAGCATTCAAAATATGAAGATCATGATATACAGTCCCATCAGTTCATGGCAAATACATGGGGAAACAATGGAAACAGTGACATACTTTATGTTGGGGCCTCCAAAATTACTGCAGATGGTGACTACAGCCATGAAATTAAAAGATAGTTGCTCCTTGGAAGAAAAGTCATGACCAACCTAGACAGTATATTAAAAAAACAGAGACATTACTTTGCCAGCAAAGGTCCATCTAGTCAAATCTATAGTGTTTCCAGTAGTCTTTTATGTACGTGAGAGTTGGACCATAAAGAAAGCTGAGCACTGAAGAAATGATGCTTTTGAACTGTGGTGTTGGAGAATATCCTTGAGAGTCCCTTGGACTGTAAGATCAAATCAGTCAATCCTAAAGGAAATCAGTCCTGAATATTCACTGGAAGGACTGATGCTGAAGCTGGTGCTCCAATACTTCGGTCACCTGATGTGAAGAGATGACTTATTGGTAAAGACCCTGATGCTGGGAAGGACTGAGGGCAGGAGAAGGGGACGACAGAGGATGAGGTAGTTGGATGGCATCACTGACTCAATGGACATGAATTTGAGCAAGTTCTGGGAGTTGGTGATGGACAGGGAAGCCTTGCGTGCTGTGGTCCATGCGGTCACAAATAGTTGGACATGACTGAACGATTGAACTGAAGATGTAAGAGTTCCAATTTATTAATTTTCCTTCTTCAATAATGTATCTTCTATTTTCTCTAAGAAATATTTGTCTACCCTAACATAGTGATAGACCCTACTAAAATTTCTTCTATGGACATTGTTTGATTTTTCACACTTATGTCTATGATCTGTCTTGGAATGATGACATGAACAGTTAGTTACCGGTCAACTTTCCTTTAGTCCACATAAATATCCAGCTTTGGTGCCACCAGTTGTTGGAAGTTCTGTTTTTTGCATTATTTTGGGAATCTTGTCAAAAATACCGACCATATTTGTGCTGATAAATTATAGACTCTTTATTATGTTTTACTGATTTTTTCCCCGTGCTTTTACCAATATGACAAAGTATTGCTATAGCTTTAAAATAAATCTTGATGTAAGTAGTTAGTGTAACTCTTAATGTTATGCTAGATTTTGAAGAAATGGTGTTTCTTTCTTTTTAAAGATATTTTAGCTAGTCTAAGTTCTTTGCCTCTCCAAATGAATTTTCCAGTGAGCTTGTAAATGTCTATGTTACTTGCTGATATTTTTATTGAGATTGTACCAAATATAGATGAATTTGAGGAAATTTGACCTTTCATCACACTGAGTGTTCTAATCAGTGGTATGTTCTATAACTTACAATATTTTTAGATCTTGTTTTGATTTTGCCCACAATCGAGGAAGAAATTTAACTTTTTATGATAGTCTGTGATATCAACTTTAGGTTTTTCCATTATTTATCAGATTGAAAAAGTGTCTTTCCATTAAGGTTTACTGGAAGTTTTAAACCAAGAATGTGCGGTGTTTCTTGCCAAATGCTTTCTCTGCAAATTTTAAAAGTGTGTGTGTGTTTTCCCCTTTTATCTCTTAATGTGGTAAATAAGATGGATTTTATTTCTTATATAAGCCAACCTTGAATTCCTGGAGTAAAACCCACGAGATCAGTGATTATTCTTTTTATTCACTGTTGGATTTGATTTGATAATATTGTACATCATGAAAAATATTAGGTTTTATAATTTTCTTCTATTGTATTATAATATTTTTATTTGCTTTTGGCATCAGGATAAGTGACTCAATAAAATGAGTTGTGGTATATTCTTTTCTCAGCTGGCATTGTATTCTCCTTACATGCTTGATGGAATTAAAGAGCAAAGTCATTTGGG TCONS_00163141 r 3' 803683 TCONS_00163141 r 3' 808789 EMBV3_07314 CAACATCAGCGAATTCACACTGGAGAGAAACCGTATAAATGTACAGAATGTGGCAAAGCC Gene GeneID:618456|ZNF208:XM_002683771:4_cdna Constitutive 0 NULL GeneID:618456 18 GENE ZNF208 NULL zinc finger protein 208 EMBV3_17945 TATAAGCGCACATTTGACCAAAACGAAGAGCTGGGGCTCAACGACATGAAGACAGAGGGC Gene GeneID:504523|ZNF259:NM_001038504:38_cdna Constitutive 0 NULL GeneID:504523 15 GENE ZNF259 MGC134199 zinc finger protein 259 EMBV3_27766 GATTATGGAGAAGGAACAAACTTACGACAAGGGACCATCAGTAGTATGAACCACATCTGG Gene BVV0102_054264 + 0 NULL GK000015.2:22698466-22701519 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058524 TCONS_00058523 TCONS_00058522 1 XLOC_036122 Coding TCONS_00058524 XLOC_036122 Coding Coding DLAT 15:22665149-22699818 = TSS44064 3855 1 TCONS_00058524_4 647 14 0.889206184377524 0.00041849887606211 2.23955110191618e-21 0.000594139767215068 0.000871882149234867 0.000390380973432849 0.000626831878984234 0.000598415046268358 0.000317130404582429 0.000631567435690629 3.83665070127002e-28 1.42349048296754e-05 1.70065495700959e-06 0.000107804645970697 0.000175189808507627 5.55922830812744e-05 0.00427158533566757 1.81159954282606e-07 0.00257555796416474 0.000367981740834819 0.000536380284846894 0.000201899372810023 0.000952317772156237 0.00104748615958426 0.00125222538324826 0.000761536773587216 7.30561769096591e-05 0.00038326802631931 6.65750725590548e-05 5.87626026375965e-05 0.000455965689587455 XM_005215823.1 DLAT PREDICTED: Bos taurus dihydrolipoamide S-acetyltransferase (DLAT), 0.0 6947 99.97 0.999740596627756 NM_001931.4 DLAT Homo sapiens dihydrolipoamide S-acetyltransferase (DLAT), mRNA. 0.0 3957 83.86 0.968612191958495 TCONS_00058524_4 sp|P10515|ODP2_HUMAN ODP2_HUMAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial; 0.0 1090 89.64 0.998454404945904 3 coding 0 0 0 0 -0.829410578139006 0.0901342200170969 -0.0709049562977298 0.301991373299554 ACTCCGGAGACGGCGTTGGTTTTGGGGTGTGGGGGCCGTGGCACTATGTGGCGCGTCTGTGCGCGACGGGCTCAGAATGCAGCCCCCCGGGCGGGATTCGGGGCTCGGTGGACGGCCTTTCGGGAGGAGCCGGGAGCTCCGTGCGTGACCCCGCAGGCTGGCTCGGCTCTGGCTCGCTGCAGCAGCAAGACCCCAGGGTATGGCAGGGTCCGGGCACTCTGCGGCTGGAGCCCAGTCTCTCGGGCCACACCGCGGAATCGCGTCTTGCTGCAGCTCTGGGGATCGCCTAGCCGCCGCTGGTATAGCCTACCCCCGCATCAGAAGGTTCCATTGCCTTCACTGTCCCCTACAATGCAGGCAGGCACCATAGCCCGCTGGGAAAAGAAGGAAGGAGAAAAAATCAATGAGGGTGAACTAATTGCAGAGGTTGAAACCGATAAAGCTACTGTTGGATTTGAGAGTGTGGAGGAGTGTTACATGGCAAAGATCCTTGTTGCTGAAGGTACCAGAGATGTTCCAGTTGGAGCAATCATCTGTATCACAGTTGACAAGCCTGAAGATGTTGAAGCCTTTAAAAATTACACACTGGATTCTTCAGCAGCACCTGCCCCACCAGCAGCCCCGGCACCAACCCCTGCCGCCCCCGCTCCATCACCTACACCTTCTGCTCAGGCTCCTGGTAGCTCATATCCTACTCACATGCAGGTGCTTCTTCCTGCCCTGTCTCCCACCATGACCATGGGCACAGTTCAGAGATGGGAAAAAAAAGTGGGTGAGAAGCTAAATGAAGGAGATCTATTGGCAGAGATAGAGACTGACAAGGCCACTATAGGTTTTGAGGTACAGGAAGAAGGTTACCTGGCAAAAATCCTGATCCCTGAAGGCACACGAGATGTCCCTCTAGGAACCCCGCTCTGTATCATTGTGGAAAAAGAGGCAGATATACCAGCATTTGCTGACTATCGGCCAGCTGAAGTAACTGATTTAAAACCACCAGCACCACCACCTATCCCATCTCCGGCAGCCCCTGTTCCTCCAGCTCCCCAACCTGTAGCCCCTCCACCTTCAGCCCCCCGGCCAGCCGCTCCAGCTGGACCAAAGGGAAGGGTGTTTGTTAGCCCGCTTGCGAAGAAGTTGGCAGCAGAGAAAGGGATTGACCTTACACAAGTAAAAGGGACAGGACCAGATGGCAGAATCATCAAGAAGGACATTGACTCTTTTGTGCCTACTAAAGCTGCTCCTACTCCAGCAGCCGCCGTGCCTCCCCCAAGTCCAGGAGTGGCTCCAGTTCCTACAGGTGTCTTCACAGATATCCCAATCAGCAACATTCGCCGAGTCATTGCACAGCGGTTAATGCAATCTAAGCAAACCATACCTCATTATTACCTTTCTATTGATGTAAATATGGGAGAAGTTTTGTTGGTACGGAAAGAACTTAATAAGATGTTAGAAGGAAAAAGTAAAATTTCCGTCAATGACTTCATTATAAAAGCTTCAGCTTTGGCATGTTTAAAAGTTCCTGAAGCAAATTCTTCTTGGATGGACACAGTTATAAGACAAAATCATGTTGTTGATATCAGTGTTGCAGTCAGTACTCCTGCAGGACTCATCACACCTATTGTATTTAATGCACATATAAAAGGACTGGAAACCATTGCTAATGACGTTGTTTCTTTAGCAACCAAAGCACGAGAGGGTAAACTACAACCACATGAGTTCCAGGGTGGCACTTTTACGATCTCAAATTTAGGAATGTTTGGGATTAAGAACTTCTCTGCTATTATAAACCCACCTCAAGCATGTATTTTGGCAATTGGTGCTTCAGAGGATAGACTGGTTCCAGCAGATAATGAAAAAGGATTTGATGTGGCCAGCATGATGTCTGTTACACTCAGTTGTGATCATCGGGTTGTCGACGGAGCAGTTGGAGCCCAGTGGCTTGCTGAGTTTAGAAAGTACCTTGAAAAACCTATCACCATGTTGTTATAATTAATCCAAGAATGTCTAGACTCGCCTAGGTCACACTGTTTCATTCTTACCAAGGTATTAATATGTCATTAAACGGTGGTTCTCTTTTTATTTTAAGGTTAATCAGTTATTTTTGAGTCTGTCCAGATAAGTTATTTGTAATGGGCATTACGAATTTTTTAAAATGCCAATACATCCCAATATTGTGCACATTTAATAAACACCAGATTTTAAGCTGTGTACTCCAGGTCAAGGGGCCTATGGCATAGCCCTTTGGTGGTAAGTCCTTCCACTGGAAATGCAGAGGTAGAATTGTGGTTCCCTATTGAGACAGGCACATAAAAGTAACCTTGATGAGACCTTGAGGTTTTGAAATTTAATTAACTCAAATGTTTTGATTAGATTTGAGAAAAGAGAAGTCAGGAAAACTACTTCATTTGGAGAAAGGATTTGAACTGAAACTTGATTTTGGAATTTAAACCTAGTTAAAAATTTTCTGTTACATAAATCTTGGTTTATCATGGATAAGAAGCATGGAGAACTTGAAGGAAAATATGAGAAAACTTTAAAAGTCAACATTTTCATAGGACTGTTCAACCAGCTGTTCTTTGTTGTTTTTCTATGAATTCAGAAATGGTTGTTTTCTCCTCTTGAGATGAAGATATAAATATGAACCAGCTCCTTGGTATAAGTGAGAATTTGTGTGTGTATCTATTTAAATGTGTCATTGTGAGAGCAGAATTCTATAATTGCCTCAAATAAAAGAATATGCTTATAGAATTTAACAGAGTGAACTTGTGAAAGTAGAATTTTTCCTGTAAAATTAACTAGTGGTTACTTGCAAATGAACTAAATTACTAGGATTTATTACTTAAATACTTGAAAAACTTGTATCAAGTAACTGTGGAATGGAATAAGTGTATATATGTAAATATGGTTCCTAGTGAGATATGTGCCAAAGTCCATTTATCATCAAGTTGTACCTGAAGAGAAAAAGGGGAGAGATACACTAGTGGACAGTTTGGAGTGATAAAAGATGATGACTGGAACAAACTGGTCATTTCTACTTGGATAAAGTGGAAAATGTTAAATGTGTACAAAAAGAAGTGTTCTATGTTTTTCCACCCCAATGTTGTCTCATGTAAAATAAGAAAACCCTAAAATCCTGTCAGAGAGAAAAAGATTATTTAGGTTGTTTGCTACCTTATCAGCCTAAATATTTATTTTCCATTTTCTTACAATTTGCCTTTCTGTAGGGGGGTGGGGGGTGGTGATATTCAGGATAATAAAAATGAATTAGAAACATTATTGCAGTTCTAGACTTTCTATGGAATTGATGTGACTTAATAATAAATTTGGAATTGTTTATGACTATTAGCAAATCTGATCCTCCTTATAAAATGTAATATGCAGAACTGTTCCCTGAAATTTAGGCCTTTCAATGTGGAATCTGTTTCTAAATGTTCATTATTACATGGCGCACAAGTGACACTCGATATATTCCAGGAATATTTTCCTTGCCGTATTATTATGAAAATAAATACGTTAATCTGACTTTTCAGTAGTGATTTTAGCTTGAATTGAAGATTATGGAGAAGGAACAAACTTACGACAAGGGACCATCAGTAGTATGAGCCACATCTGGTTCAAATACATGAAACTTCAAAGATAATTCATTATTTGGTAGTGTTTATGGCTCTGTTGTTCCCTTGAGAGAAAAATTTAAAAGTTGCATTCTAATAAAAATTGTTCTGAGTTAAAAATTAACCTGAGCTATAATCTAAATTTGGATTCAGTTTATTTCCCTTACCAGATGGAATGAACAAGTCTTAGAAATAGTGTTTTGGTTCAAATTAGATTGTTTGAAAAATTAAACTATATGTTTTC EMBV3_09509 TCAGGATTGCATATATAAGAATTCCACTGAGAAACTCTAAGGTTCTTAAAATTGCCAGCG Gene GeneID:537312|RAPGEF4:XM_002685322:180_cdna Constitutive 0 NULL GeneID:537312 2 GENE RAPGEF4 NULL Rap guanine nucleotide exchange factor (GEF) 4 EMBV3_12564 CCATTGGAAGACGCTACGCCAGGACTGATGAGATTGGTGTGGCTTTCGGCATAACCATTG Gene GeneID:408010|GARS:NM_001097566:13_cdna Constitutive 0 NULL GeneID:408010 4 GENE GARS NULL glycyl-tRNA synthetase EMBV3_25757 AAGCTCCCACAATGTCTCAGGCTCCCTCTCCAGCTTCACCACCCTCTCCTCCAATTATTT Gene GeneID:614456|KRT6A:NM_001083510:54_cdna Constitutive 0 NULL GeneID:614456 5 GENE KRT6A MGC151786 keratin 6A EMBV3_17187 TCTACTGCCACTGGAATCTTGCCTGTCTCCCACTCCTGACATCTTCTCATGGGTTTGGAC Gene BVV0101_022133 + 0 NULL GK000003.2:81353430-81515075 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31671 GGCTTTCTCCAGCAGCCAGGCAGAACCAGGCTGCATGCTACACAACCTCATTACCTTCTT Gene BVT0102_351775 + 0 NULL GK000007.2:52908810-52937519 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217149 TCONS_00217146 TCONS_00217145 1 XLOC_131431 Coding TCONS_00217149 XLOC_131431 Coding Coding LOC783452 7:52863544-52909686 j TSS161776 2566 1 TCONS_00217149_3 259 0.410756040530008 3 0.944452872716239 0.000428680136270996 0.00116756348078262 0.0014298275323048 0.000479483710869383 0.000369740690632266 0.000399306696049848 0.000508227226528389 0.000287691402200977 0.000153998342811429 0.00017488367259661 8.23757213127737e-14 1.50434152798172e-136 2.87360593201516e-05 0.00043472434337885 0.000159708307776378 0 0 0 0.000630010084849962 0.000601230466593679 0.00104624344923059 0 6.24870640269454e-21 8.96039863292409e-42 0.00112977202628724 1.92051845368004e-19 0.000652458685875285 0 1.10887253541798e-13 2.84592214993522e-173 XM_003582427.2 NRG2 PREDICTED: Bos taurus neuregulin 2 (NRG2), mRNA. 0.0 1258 100.00 0.271239282930631 XR_245860.1 NRG2 PREDICTED: Homo sapiens neuregulin 2 (NRG2), transcript variant X5, 0.0 1133 91.90 0.303975058456742 TCONS_00217149_3 sp|O14511|NRG2_HUMAN NRG2_HUMAN Pro-neuregulin-2, membrane-bound isoform; 2e-90 289 96.58 0.55984555984556 0 coding 0 0 0 0 AGGGGGGAAAAAAGAAGAAGGTAATGAGGTTGTGTAGCATGCAGCCTGGTTCTGCCTGGCTGCTGGAGAAAGCCCAGAGACTTAGAGGCTGGACCCTCTCTTAACCACCACCCCTGGTTGGGTGACCCCAACGCCTAGCCAAGACTCCATATAGCCTCAACTCTTCCCCCAAATGACGGGGCTGGGATCCTCCCCAGCTGACTCGAATCTCCAGCCACTCAGCAGGCGGTGGAGGGCCAAGCCCGTGGGCTCAATTAGGGACTGGCCCCTAGGGTCCTGCCGGGGAAGGGAATATACAACCCAGGAGGCAGGTCAGTCACCCGGGCCGTGGCATCTCCCTGGCTCCCACAGTCGAAGTCCAAAGCGGGCTCTGGTTTCCCCTCCCAAGGCGGCGGCGGCGGCGGCGGAGCGGCGGAGCCCCCCAAATGGCCTGGCCAGATGCGGCAGGTTTGCTGCTTAGCGCTGCCGCCGCCGCCGCCAGTGGAGAAGGCTCGGTGCAGCAGCTACAGCGACAGCAGCAGCGAGAGGAGCAGCAGCGGCAGCGGCAGCAGCGGCGAGAGCGGCAGGAGCAGCAGCAGCCACATCAACAGCAGCAGCATCTCTCGTCCCGCTGCGCCCCCAAAGCCGCGGCCGCCGCAACAGCCGCAGCTCCGCAGCCCCGCAGCCCGGAGAGCCGCCGCCCGCTCGCGAGCCGCAGCCGCCGGAGGCATGAGGCGCGACCCGGCCCCCGGCTTCTCTATGCTGCTCTTCGGTGTGTCACTCGCCTGCTACTCGCCTAGCCTCAAGTCGGTGCAGGACCAGGCGTACAAGGCGCCCGTGGTGGTGGAGGGCAAGGTACAGGGGCTGGCCCCGGCCGGCGGCGGTTCCAGCTCCAACAGCACCCGCGAGCCGCCCGCCTCGGGTCGGGTGGCGCTGGTGAAGGTGCTGGACAAGTGGCCGCTCCGGAGCGGGGGACTGCAGCGCGAGCAGGTGATCAGCGTGGGCTCCTGTGCGCCGCTCGAAAGGAACCAGCGCTATATCTTTTTTCTGGAGCCCACGGAGCAGCCCTTGGTCTTTAAGACAGCCTTTGCCCCTCTCAACACCAACGGCAAAAACCTCAAGAAAGAGGTGGGCAAGATCCTGTGCACTGACTGCGGTACCTGGAATCAGTGGAGTCAAACAGTATCTGTCTGCACCTACTGTATATATCTGGGGGCTTTCCAGGTGGCTCAGTGGTGAAGAATCTGCTGGCCAAGCAGGAGACACGGTTGGAAAGATCATCTGGAGGAGGAAATGGCAACCCAATCCACTATTCTTGCTTGGGAAATCTCATGGACAGAGGAGCCTGGTGATCAATAGTCCATGGGGTCACAAAGATTGGACACAACTTAGTGACTAAACAACAACTATATATTGGAATGCATTTTTAATGTTAACTTATCATATGTCCTACAAACAGTTTGTGCCATCTTTTTCCCCCTGTGCTATACAGTACGTTCTCATTAGTTATGTTTTCCACAAAGTAGTGTATATATGTCAATCCCAACCTCCCAATTTTCCCATCCCCTTAGTGTCCATATGTTTGTTCTCTTCATCTATGTAGAGACATAATCTTGATGAAATATATTATTCCTTATTTTCTATTATTCTCTTTTTATTTGAGAGCAGTAACTCTTTATAAAATATGATATATGTATCTCCTTAGGCCTCTATTAGTCCTATTTGTGCTCACAGAAAACTTGCAAAAATAATACAAAAGGTTTCCATACACCCTTTACCCAGCCTCCCCTAATAGTAACATGTTACATAACCATGGTATTATTATCAAAAGTAGGAAATTACCTAGTTTATATGCCAGCTATAAAAATAACTAGGCAAGAGATAATGGTAGCTTGGGTCAAGTGGATAATTGGGGAGGTGATGAGAAGTGGTTGGGTTTTGGATATATTTTGAAAGTAGCATGTACTGAATTTGTAAAAGGATTGGATGTGGATTGAGAGAGGAGAAGGGGAGTGCAGGATGGCTCCACAATTTTTGACCTGAACAGCTGGCCTTGCCATTGTGGAGGTTGGGAATGATTACCAGAGATAGCCAGGCAGTTTTATCCATTAACTGAGAAACTCCTCTTTTTTCATCACCTTCACAATTATCCACTTGATCCAAGCCACCATTATCTCTTGTTTTAATAGCCTTCAGATTGGTCTCTCTGCTTCCACACTCACCCCTCTTCAATCCATTGTGAACACAGCAGCCAGATTAACCCAAAGTGAAAGCTAAGTTAGCCCGTGTGGTTCTTCTGCACAAAGAAGGCATCTGGCCTTCTTCCTCACCCAGCGTGAGATGACTAAAGGCCTCCCTGTGTGTTCTCTTCCGTTACCTCTCTGACCCCAGCTCCTACCATCTCCCCCCATTTTACCCCTCCTGGTCCTTGCCATCTTCTGAAACTGCCAGCTGTGTTCCTGCCTTTGGACCTTTGTAGCTATAGTTTGTTCTGTTTAATGTTTGGAATACGCGTCACCTGTAACTGCACAGCTCGTTCCCTCAGTGCCTTTACCTCATCAATGTTCCCTCCTCGCTGTGACCTCAG EMBV3_10381 GCGTCATCTAGAACTGCCTCTCTGTGACTTCCAGGTAAGCTATTAAGGAGACTCAGCCTG Gene GeneID:784720|ELP3:NM_001130762:70_cdna Constitutive 0 NULL GeneID:784720 8 GENE ELP3 NULL elongation protein 3 homolog (S. cerevisiae) EMBV3_09934 GGTCCGAAACCCAAGCGGCTTCTGCTGCAGGAGTCACCGGCCCAGGACGTCCTGCAGGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07131 CCTGACACACTGGATGTTTTTTAGTTTCGACATGAACACTGGCCATAGAGACATTTTTCC Gene GeneID:513223|RASEF:NM_001105362:22_cdna UTR3_Alt 2 NULL GeneID:513223 8 GENE RASEF NULL RAS and EF-hand domain containing EMBV3_40080 AGGGACCTCAAAGCCAGAAACGCAGCCAAGGGGACCCGGCGCCCGAGAGTGGTGAGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23784 CAAAGCTGTGGATGGGAGGTGCAAGTTGGAGGATGAAGTACCTACCGCCATTGTGCTTGA Gene GeneID:514759|ALDH18A1:NM_001046181:138_cdna Constitutive 0 NULL GeneID:514759 26 GENE ALDH18A1 MGC127306 aldehyde dehydrogenase 18 family, member A1 EMBV3_34216 GGAGGGAGATGGATGCTGAGTTGTCACATCAAAGGAAGCAGCATTATTCTAACAGCATCC Gene GeneID:783114|LOC783114:XM_002683684:2_cdna UTR3_Alt 1 NULL GeneID:783114 9 GENE LOC783114 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_22754 TGAAGTGACCGACTTCACCTCTTTGGAGGAAGTCCTACAGGACAATTTTGCTTCTCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39574 AGAGAAGGAAGCCCTGCTGCGAAAACTGGTCGCCTTGCTGGAAGAGGAGGCAGAAGTCAT Gene GeneID:533338|BCL2L12:NM_001101148:307_cdna Constitutive 1 NULL GeneID:533338 18 GENE BCL2L12 NULL BCL2-like 12 (proline rich) EMBV3_08633 GATGTGGATATGTCCCGCACAAAGAAACTACAGGAGGTAGAGCTTGAAGTCCAAAGGGCC Gene GeneID:505326|LOC505326:XM_002696687:368_cdna Constitutive 0 NULL GeneID:505326 21 GENE LOC505326 NULL similar to mast cell proteinase-3 EMBV3_23545 GGTGGCAGAGGCACCAGAAACAGATTGAACCGACTTGCTGGACTCTGAAGCTTAGCAAAA Gene BVT0102_058168 + 0 NULL GK000003.2:118032857-118043315 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174866 1 XLOC_104714 NonCoding TCONS_00174866 XLOC_104714 NonCoding NonCoding - 3:118032918-118042923 - TSS129671 4487 3 TCONS_00174866_3 118 0.0494762647648763 3 0.551779288284686 5.15481357423934e-05 1.56761920028792e-05 0 4.07157341808934e-05 5.28159019026921e-05 1.99301260004497e-05 6.49845100791095e-06 0.000152909786264055 4.88324818416644e-131 2.54400544002289e-06 3.14254187051319e-06 1.27503646927444e-05 0 0 2.95224518962304e-05 0.000782867987263054 0 0.000217444225469948 0 1.60272719863437e-06 0 0.000117420790461125 0.00062883957386458 0.000178850767841953 2.74275037923136e-05 1.42816438013235e-05 5.22321987899274e-06 1.66766356150051e-05 3.78674638897019e-05 6.19794220760763e-06 XR_234153.1 LOC101904947 PREDICTED: Bos taurus uncharacterized LOC101904947 (LOC101904947), 0.0 1882 99.71 0.233563628259416 NM_080678.2 UBE2F Homo sapiens ubiquitin-conjugating enzyme E2F (putative) (UBE2F), 1e-26 127 81.34 0.0296411856474259 0 noncoding 0 0 0 0 CTATGTCTGCTCGGCTGGAGCTGGATCCGCGGTCAGCCGAGGCCGGTAGGCCGCACCCTGCGCCTCCGCCGTGACCCGACCCTCTGCGCGGCTGTCCTCATGGGTGTGAAGTGGCCCTGATTTGCATCTCCCTAATGACTGAGACACTGATTTATGGATTTTTCCAGAGGCCCATTTACTCAAGCAGAGCCAACTGTTGAGACACAGCACCTGTCACTGAAGGGTGGGGGTCTGTTGGCCCGGGTGGCCTGGGCTGGCCGGCATTTCCCGCCCCCAGGCAGGGGCCTGTCCTGAGCAGGCTTGCCTCTGGCGGACTCATGCTCTCAAGCTCCCGCTGCACCTACCTACCGTCAATCATCACGTGGTAAGAACTGACTCAGTCACGCCTGCAGCGAAGATGAGGCCCTGTGCTCCAGGAGCTGACCGATGCCCGGACAAGCAGAAATAGACACACGGGCAGGTGCAGACCTCCCCTGGTGCTTCTGGAAGCCTGGGCGAGGTGAGCACACTGCAAGACTGTCCACCAGCCTGTGAGACCGGCCGGCCACACAGGGGCACCACCTGAACTGAATCCAGAAGGAAGCCCCAGGAGGGACGCTGACGCTGGGGGTGGGACGGGCCTCCCCAGGGCAGGAAAGCCAGGGTCCTGGGTGTAGCAGCAGGCAGAAAGATGGGCCCAGCTGCCTCGGGCTCTGGATGCCAGGCTGGTGCCTCCTCTGGAGGCGCGGGAAGGCTGTAGGAAGCCCCGGTGGCCACGCGTTGGGAGGGTGTGGGGCCGCTGCCCTGTGTCTGCTCCGGTCTCAGCGGGTGTGTGGCAGCTCCCCGCCCCCGCCTGCTGTTCTGTGGGGACTGCGGTCTGTGTCACACCCTGGTCACTGGTCCCGCCACACACGTGGCAGTGACACTGTGCTCACCCAGGACACAGGCGTCATTTCTCAGACTCTTGAGGCTGAAGCGTGTAGGAGCAGGAAGCAAGGCTGTTTCTCCCAAGCGCTGCACCCAGCTCGTGGCACCCACCCTCATCCAGGTGAGGGGACGGGAGGACGCAGATGAACAGGGTTACTGACGCTGGAGTAAATTCTATTTTTCTTTGGCTCACTGGGCCCCAGCTGCAGTCTGTGGGATCTCTGATCTTCATTGTGGCGTGCAGGACCTTTAGTTGCAGCATGTGGGATCTAGTTCCCTGACCAGGGATCTAACCCAGGCCCCCTGAACTGGGAGCGTGGAGTTGTCATTACTGGAGCACCAAGGAAGTCCCGGAATACATTTCAGAAAGAGCTGTCGGATAACGAATGATTTAAGCAAAATGATCTTTCACCATCGAGCACCATGCGTGGCCTGTGGAACGACTGCAGGGCCTCCCCGGGGTCATGTAGGGGTGAGCATCCCGGGCCATGAGCTGTGGGGATGCCAACCCTCTCCCCAGGCCCCCGACCACCATCTAGCCTGGTCTGCAGAGCACAGGCCTATCCATAGTCTCTCCTCCAGCACTGGGAACTCTTGCAAAACCAATGATTTAACTGCCCGTAAGTTTAAAAAAGACAAAAAACCAAAACACCAGTGAATTTACCAGAACTCTGGCCCAGTGTGACTGGTGATCAAAGTGAAAAAGCCCTAAGATGGATTTTTAAAAAGAGATGATAATTCAGTTCTTTATACAGCTTGACACGAGGAAACAGATATCCTTAACAGTGCAAGGTCCCCAAATGCCTCCATCTCTGGGTTTCTTGAAGAACATTTGCCCAACCATGATTCTTTCGGTAAGTCACTTTGGTAACCTGGGGAACCCCAGGGCATGAGCGAGAACTCCAGCAGGAGATGTGGATTCCTCTGAACTGGCCTCTCCAATCTGCTGGATTTGTTTGAGGCAGGGCTGTAGGAGCAGGGAAGGAGAGGTGAGACTGGTTTCCCCATTTCCCAAGTTCTTCAGCAAAGGAAAAGGAAAACATTATTTTACTATGTATCAATAGCATTTTACTACACACACTTTATGAACTTGTAGCAAACCTGACTTTCCAAGATTAAACATTTTTAAGTGGATGGAAGTGAAATGACCCTGGAACAGACTGTACCAGCCGTGAAAGGATCTTGTTAAAGCTGCAGTTAACGCCTTGTTGGACTTCTTATATGGAAAAAGTTCTGCTTGACTTGATCATCCCAGCAAAAGATCCCATGGCAACCGGAATTTTTTTCCCACAGCAGTTCAAGAAAGAAAGAAGGGTGGGGTAACAGAGCAGCCCAGGCTTGTCCCCTGAAGACACGTGACACATCATGGTGGTCACCGCCACCTGGGAGTTTGGCCTCTGAGAGAATTTTGCTAAGCTTCAGAGTCCAGCAAGTCGGTTCAATCTGTTTCTGGTGCCTCTGCCACCAGATGTCCTGAGAGCAGACTTGGGACTCTGCTGAGACTGGCCTGGCTGCGGCCACACCGTAGGGAAGGCTTGCTCCCTCCTGGAACCGTGACATCTTCCTGTGAGTCCCCAGGAATGGAACAAGGGCAGAGGAAAATATGCATGGAACACTGAGACTGGCAAATATGAAGGGACGCGTTCCTTTCAAAGACGACATTCAAAGTGTTAGCTACTGCAAATAGTCTGAATAGCACAGAGTCTTCCCACAAATCTCGTACTGCAGACTTCTCCCGCATGTGCACCACCCAGCTTAGTCTGAGTGCCAGAGGTCAGACAGGCAGGCCTCTGGGGCTTTCAGGGCTTAGAGAGAAGGGCAGGTAAAGCAGGGCATCTCGTGAAGTTACCCAAGATCCTGCTCCCTGAGGCTGGCATTGGGCAACACAGACACAGCAGCTGAAAAGCACACCAGGACCCGACGTCCCGGGCTGCAGGGAGAGACACGGCCAGGAGGTCAGTGCTCAGCACCTGAGTAACGCTGGCCCTGGCTCCTCCCAGAGGCAGCATGCAGGCGGTCTGTCCGAGGGAAGGGAAGAGGGGAGATGTGAGCTTCTCCTCCTGCCAGGGGTACCCTGGAGCCATCTCCACGTAGTGTGCCTGAAAACCACACAGCTGATGCGTGCGATTCTAAGCAGCAGTGGCATGGGGACACAGCACCACCCCAGCTGGCTCCAGGGCCGTTGGGGTACCCAGAGGCCCAGCAGCCCCACCCCTGGCAGATCAGACATCACCAACTGTCCTGGGTTGGCAGGCACAGGCACCACGGGCAGAAATGTTACTGTGGCTTAAGAGTGCGAAAAGACCCTAAGAAGCCAAAGTCCCAGAGGTCAGTGTCCCACAGGCACCAAAAGCTGCTGCGGGGCCCGCTGGGCAGGCACCCAAGACAGCACCACGGGCCATGGGCCAAGCTGGGTGAGCTCCTTAACAAGATGGGGTGGGGTTGGGGGCAGGATGCCTCTGAGGGAGGGCCACCGGACAGAAAGGTATGATCCAGAATGTGGGAGTGTCACTTTTGAACTGCTTGACTCCTGATGAGCAGAGACCTGTGTGTGAGGTCAGAACCGACAGGGAGCTTTATCCCTTTCACTCTGTCCAGCAAGCAGTCTTTGCCCTGCATTACCCATGTTTCATTTCTTCTACCTCCATCTGCACTATTGGGCGGGCTGCCTGGACAGCTATGGGGTGTGACCTAGGGGGTTGGGCAGGAGCTGGCAGGGAGCAGTGTGCCCTAGGGCATGTGGACTGCCGGCTACTGCTCTCCTGACCCACCTAGCAGAGGGGAGTTCTGTGGTCTGTGGGGGAGTTCCCGTGATACTTTGACAATGGGTTCCAGTTAGAAGTATGTGACTGGGGTCCCTCTCCCAGGATGCTTGTCCTGACAGGCCTGGTCAGAAATGCCAACCCCCCCACCCTCTGCTCCATGCACCAGACACAGCGGCCTAGCAGCTGGGTCACCCTCCTGTCTAATGGGCAGGGTTCCTAATGACCAGTGGGAAGTGTGGCCCCAATTCCTTTCTGGACAGACTGATCTCATAATCAGAGACAATGCTATCAACTAAGAGAAACCAACCAGACCGTGCACATGGCAGACGGGGCAGTCCAGAGGCCTGAGGAAGCTGTCAGTTAAACTTGAGCGTGTCAGGCAGGCAGCAGAGGACTATTTGATTCCAGCTGTTCCGAAGTCTAAGGCCAGAGTAAACCCACTCACCTCTTTTCCCTGTTCTTACTCTAAGGTGTGCCACCTCTGACTCCTGGCCTGCCAAGGGTTAGGAGAACCGTCCCGGAGACCCAGGGGCCTGGGAGCACGGGAATACCCCCAAATCCCGCCAATACCTCAGAGGGCCACAGGTGCAGTGTCAGGGCCTCAGGCTGCTGCCTGAGGTCTCCCTCCCGGCCCCAGAACATAAGGCTCCCTGCACACTGGCTCGCAGGCGTGTCACCACACAGGAGCACCAAGCCCCCAGGCGGGCTGGGCTGCAGCCAGGGTCCTCCAGGCAGCACACGACCTTGCTTTTCTTTTAAATCTTCCAGATCTAGCTGCAAGGGCTCCCGAAGCTTCTTTGCCCCATCTGGACCTGG TCONS_00171558 r 5' 0 TCONS_00171558 r 5' 0 EMBV3_27076 CACAGCTGAGATACACACCTTTGGATCCTAGACAAGAAATGGCTCACAGTAATGGGCGAA Gene GeneID:100295556|LOC100295556:XM_002690618:14_cdna Constitutive 0 NULL GeneID:100295556 10 GENE LOC100295556 NULL hypothetical protein LOC100295556 EMBV3_27981 TATTCCCTCTCCCCATTGCGCATCCCCCTCCTCCATCAGTCAGTAAGTCTCCTTTAAGAG Gene BVV0102_101619 - 0 NULL GK000022.2:34590217-35067534 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130898 1 XLOC_079604 NonCoding TCONS_00130898 XLOC_079604 NonCoding NonCoding - 22:35066794-35067392 - TSS97765 598 1 TCONS_00130898_1 38 1 0 0.000204767921639974 0 1.54749209767897e-05 5.55461811722183e-05 0 0 0 0.000108799178723378 2.63884042904626e-05 0 0 0 4.79812272303453e-06 0.000125859153086357 4.92260490233909e-05 0 0 0 9.59321965041198e-05 0 0 0 0 8.41033929676516e-05 0.000139032862596221 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0398043136315647 0.894726214888785 -0.137228800716253 0.308322667185962 AACAAAGCAACCCCTTTATATCGAAGGCTGGAGTGTTTCCAGGATAACCCTTCAGCTCACCAGGGCAGAGGGTGGGGATGGAGGTGGGACTGCGTACACCTTTCAGATTCGGTTTCTGCACGCATTACACTTTCATTTTGGTAATCAAGGACATATTGCTAAATTTAAGGGGTCAGGAACAAGTCAGGAGCTGAAAAGAGCTCCCGGTTGTGAGAGAGGAAGACGGTCACCCCTAATAAAATAACTAAAGATGCCCCCAGCAGTAGATTAGTGAAGTTTTAAATCTGCATACATCTGGAAAATGGGTGTAAACGTTAAGTCGCCGGCCCTGTTTGCAGACTGGAAGGAGGGAAAAAAACTTTGAGGCCAGAACTCTCCAAAGCGGGGGCATTGCCTTCTTTACCGAAGTTTTCTCCTCCCGTACACCCAGAGGGCATACTTTTATTCCCTCTCCCCATTGCGCATCCCCCTCCTCCATCAGTCAGTAAGTCTCCTTTAAGAGCCAGAGGCCGACTCTCCCTTTCTCCTCCCAGTCCCCCGCCCTTCACACCTTGGGTGGGAAAAGAGACTGGGGTGGGGTGGCTGGAGAGGCGGGAGG TCONS_00126710 . 3' 107 TCONS_00126710 . 3' 704 EMBV3_13605 TTTCCTGTATGTGATCGCTCCATCCATCAGGAGCCCGAGTATACATTGCCTGTCGAGATG Variant GeneID:369021|RDH12:NM_183363:44_cdna 69^187 1 EMBV3_00214 GeneID:369021 10 GENE RDH12 DSSDR2 retinol dehydrogenase 12 (all-trans/9-cis/11-cis) EMBV3_21935 TAGCTAGAGAACTTTCTGGAACCATTAAAGAGATCCTGGGGACCACCCAGTCCATAGGCC Gene GeneID:615482|LOC615482:XM_002686137:236_cdna Constitutive 0 NULL GeneID:615482 3 GENE LOC615482 NULL similar to 60S ribosomal protein L12 EMBV3_37157 CCAAAGCATCCTACTCTTGGCGAGCACCTTCATGTGTTTCCACACCCTGTCCTGCATCTT Gene GeneID:100140544|BOSTAUV1R418:XM_002695273:28_cdna Constitutive 0 NULL GeneID:100140544 18 GENE BOSTAUV1R418 NULL vomeronasal 1 receptor bosTauV1R418 EMBV3_11659 ATGAACTTCGTCAGGTTTGTCCGCTTGATGCTGCGTGTGGAGAACATGGAGGATGTCTTC Gene GeneID:515741|CAPN14:XM_002691433:107_cdna Constitutive 0 NULL GeneID:515741 11 GENE CAPN14 NULL calpain 14 EMBV3_22364 GTTGATCGGCATCCCTAGCCTTGGGGACAGGTGCACTCCCTGTACCGCAGGACAGGGGCC Variant GeneID:534312|SCAMP2:NM_001102170:118_cdna 829^946 2 EMBV3_14034 GeneID:534312 21 GENE SCAMP2 MGC166390 secretory carrier membrane protein 2 EMBV3_34482 GCATCCTGTGGCCGACTCTTCCCCCGCGGGGGCTCAGATAAAGGCCACCGTGAAACGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26318 GCATCGGTGGTGACAGCTTATCTCTTCACCGTCAGCAATGCTTTTCAGGGGATGTTCATC Gene GeneID:535066|ELTD1:NM_001076908:71_cdna UTR3_Alt 2 NULL GeneID:535066 3 GENE ELTD1 MGC140518 EGF, latrophilin and seven transmembrane domain containing 1 EMBV3_04777 CCTATGCCAGCATGATTTTCAAAGCCCCCGAAGAAAACAGCGATCACCTGACCAAGAGTG Gene GeneID:100296588|LOC100296588:XM_002686143:252_cdna Constitutive 0 NULL GeneID:100296588 3 GENE LOC100296588 NULL hypothetical protein LOC100296588 EMBV3_24342 CAAGAAAATGTTTTGTGATTCAGTTTCAGTATCGAGGTCCAGCTCTCGGCAGCCATGGTT Gene BVV0102_332367 + 0 NULL GK000018.2:44854331-44857021 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34688 CCTGAAGACCCCTCTGGAGACCCTGTGGATCACCAACTGCCTGATTTCAGAGTCAGATCT Gene GeneID:100300040|LOC100300040:XM_002694402:75_cdna Constitutive 0 NULL GeneID:100300040 17 GENE LOC100300040 NULL similar to preferentially expressed antigen in melanoma EMBV3_02487 AGGATTGATAGAATATGTGCTTCTTGGCAAATCTAGGTAAGCCAACACACATTAAGCAGC Gene BVV0101_015565 + 0 NULL GK000028.2:11517390-12498191 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22883 CTGTCTTGGGGACAGAAGTCCTTGTTTTAGAGTGGTTTTGATCAGTTGGGGTCAGATATA Gene GeneID:614181|HOMEZ:XM_002690504:478_cdna Constitutive 0 NULL GeneID:614181 10 GENE HOMEZ NULL homeobox and leucine zipper encoding EMBV3_27133 GGCGGCTGCCATTCTAGTTCCGTTCTTCGCTCTCATCTTATCAGGGTTTGCATTTTACCT Gene GeneID:526825|CSMD1:XM_002698611:2_cdna Constitutive 0 NULL GeneID:526825 27 GENE CSMD1 NULL CUB and Sushi multiple domains 1 EMBV3_37495 AGGGCTTGGGAGGGGGCTGGAGCCACCGAACCTGCACATCTCTTATTGTAACTCAATAAA Gene GeneID:768306|ABHD8:NM_001078123:131_cdna Constitutive 0 NULL GeneID:768306 7 GENE ABHD8 MGC139643 abhydrolase domain containing 8 EMBV3_02356 ACGTGTGCTCAGGGAAAGAAAAGGGCTTGGTGTCTGTCTCCCACCTGAAGGAATAGGGTT Gene BVV0102_224558 + 0 NULL GK000005.2:113010231-113017855 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32640 TGTAGGATGTTGGAGAACCAAGAGCAGGAGACCAACAGCAAGGCCTTTACCGCCAAGACG Variant GeneID:534567|SNX11:NM_001076904:141_cdna 146^232 2 EMBV3_22299 GeneID:534567 19 GENE SNX11 MGC143176 sorting nexin 11 EMBV3_28843 TGAATGTACAAACCATTAGGGGCCCTGAATCTGAATGACCAGTCACTGTCGTCTGCCAGG Gene BVT0102_063613 + 0 NULL GK000014.2:45039372-45126100 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053418 TCONS_00053419 TCONS_00053420 TCONS_00053421 TCONS_00053422 1 XLOC_031715 Coding TCONS_00053418 XLOC_031715 Coding Coding HEY1 14:45125142-45128692 j TSS39400 2087 1 TCONS_00053418_2 266 5 0.413355874894336 0.0022733936021827 0.00482926594476448 0.00257221142741559 0.00207454782761798 0.00266672951177198 0.00150243662491676 0.00332241460198714 0.00189448590693838 0.00470955560724652 0.000414632044376729 0.000441318274348432 0.000549440535675553 0.00103968060538023 0.00226735532350676 0.00243978410748936 0.00062009351116736 0.000293851492518085 0.00218807691612091 0.00377592841602939 0.00247052146379245 0.00124753127828333 0.000611571003401757 0.000249489768368979 0.000505868770599029 0.0060520235657716 0.00570448484956798 0.00310651654049254 0.000322727563852901 0.000118872763444159 4.81252397319102e-06 XM_005215510.1 HEY1 PREDICTED: Bos taurus hairy/enhancer-of-split related with YRPW motif 1 (HEY1), transcript variant X1, mRNA. 0.0 3570 99.40 0.95495927168184 NM_012258.3 HEY1 Homo sapiens hes-related family bHLH transcription factor with YRPW motif 1 (HEY1), transcript variant 1, mRNA. 0.0 2381 86.85 0.947292764734068 TCONS_00053418_2 sp|Q2KIN4|HEY1_BOVIN HEY1_BOVIN Hairy/enhancer-of-split related with YRPW motif protein 1; 0.0 537 100.00 0.996240601503759 2 coding 0 0 0 0 0.127667608757841 0.372800584449045 0.00910471730605771 0.932065090544217 ATCTCCGGCAGGCCTCCGCCCCGGGTGAACGACCTGGAGGAACTTGAGTTCAGCTTTAGGTTCCATGTCCCCAACTACATCTTCACAGATCTTGGCCAGGAAAAGACGGAGAGGCATTATTGAGAAGCGCCGACGAGACCGGATCAATAACAGTTTGTCTGAGCTGAGGAGGCTGGTACCCAGTGCTTTTGAGAAGCAGGGATCTGCCAAGCTAGAAAAAGCCGAGATCTTGCAGATGACGGTGGATCATCTGAAAATGCTACACACTGCAGGAGGGAAAGGCTATTTTGACGCGCACGCCCTTGCTATGGACTATCGGAGTTTGGGGTTTCGGGAATGCCTGGCCGAAGTCGCCCGTTACCTGAGCATCATTGAAGGACTGGATGCCTCGGACCCTCTTCGAGTTCGCCTGGTCTCACATCTGAACAACTATGCCTCCCAGCGGGAAGCGGCGAGCGGCGCCCACGCAGGCCTTGGACACATTCCCTGGGGGAGCGCCTTCGGACATCACCCGCACGTCGCGCACCCCCTACTACTGTCCCAGAGCACCCACGGGAACACTGGCACCTCGGCCTCACCCACGGAATCCCACCACCAGGGCAGGTTGGCCACAGCACATCCGGAGGCGTCCGCTTTGCGAGCGCCCCCTAGCGGCGGCCTTGGACCGGTGCTCCCGGTGGTCACCTCCGCCTCCAAACTCTCTCCACCCCTGCTCTCCTCCGTGGCCTCCCTGTCGGCCTTCCCCTTCTCTTTTGGCTCCTTTCACTTACTGTCTCCCAATGCACTGAGCCCTTCGGCACCCACGCAGGCAGCAAACCTTGGCAAACCCTATAGACCTTGGGGGACGGAGATTGGAGCTTTTTAAAGAACTGATGCTGTAGAATGAGGGAGGGGAAAGCTTAAATTCCCAGCTGAGCTGGGCTGTTGCCAACATCACCTTAAAGTCATCGGTAAAATAAAAAGGAAAAAGGTACACTTTCAGATAAACTTTGTTGAAAGACGAAAGGTTTGTTGGTTTACTTTTTCTTTTTTAATGTTTTTTTAATCATGTCATGTATTAGCAGTTTAAAAAAAAAAAACTAGTTGTTAAATTTTGTTCCGAACATTAAATTGAAATAGTATAAACCCACAAATTGGTGATAGGTTTGTACTGTGCCTAATTTACTTTGTTAACCTGTCTAAGAAAGATCCCATTTTTGTCCCAAAGTTTTGGGGATTTTAACATTTAGTATTTTGAGTCTGTTTGTCTCCTTGTATAGTTACAGTCTCTTTTTAGAATTAATTTTCCAAACCACTGTGCTCAATGTTAACATGATGCTATTTTGTTAATATTTTGACAAGTAAGGTATTGTATAAATGATATTCTTTGGGGGGCGGGCTGTATTGAATTTTATATTTCTGAATAAAGCGTTGACAAATCAGATGATCAGCTTTATCCAAGAAAGACTAGCTAATTCTCTGCCTCCTACTGCAGTGAGGTGAATGTACAAACCATTAGGGGCCCTGAATCTGAATGACCAGTCACTGTCGTCTGCCAGGATTCACAGTTCTGGCTTGGCTAGGAGAGGTCTGGGTTTGGAGTTGGTAGGAAGGGACAGACGACAGTTGCATAGAATATGTCTGCATTTATCAGCCTCAAGCAATGCAATGAATTTTTAATTTCACAGATCTCAAGTTCACAGATGTTAACATGGATAAGTGATCATGGTGTGCAAGTGGTCAATGGAATAGTCCAGTGGAACCTGTTAAATTCATAACCTAATTCTTCCCGGAGCTGCCATGTTTTCTTTTCACTGGGAATGTTTATGTTGTGTTCTTCTTTTTGGCGCATGGAAATATGGTTGTTGAGATAACTTAAAAGGTCTTTGCTGCCTTCTATTTGGTTTATTTAATTTGATTTGAGCTATAAAAGCATCATTTTACAGGTCTATTCCTTTAGCAGGTATAGTTTAAGTGACCTCCACTGAACTGGGTTTGACCTCTGTTGTACTGATGTGTTGTGACTAAATAAAAAAGAACAAACTCTTCTCCTGTATGTCTTACCTACTTTAGCCTTTCTTTCTGTTGACTGAGATAAAATTCCTCAT EMBV3_25730 GGCCCTGCAGATATTCACATCTAAGGTGACTAACAATGACAAAGGCCTTACGAACTGTAC Gene GeneID:513934|GMCL1:NM_001101983:41_cdna Constitutive 0 NULL GeneID:513934 11 GENE GMCL1 MGC166354 germ cell-less homolog 1 (Drosophila) EMBV3_09754 ACACAGGAAGACCATAACTCAGGCACAGGAGCAATCATGCAGGGCTAAGCCAGAGACTAA Gene BVT0102_133685 + 1 EMBV3_02947 GK000002.2:98269170-98416819 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103194 1 XLOC_062032 NonCoding TCONS_00103194 XLOC_062032 NonCoding NonCoding C2H2orf67 2:98280077-98282188 x TSS76669 2111 3 TCONS_00103194_6 83 0.0459497868308858 1 0 1.10224160430533e-05 3.33202243445328e-05 2.19186071484448e-05 3.93374814239293e-06 0 0 1.10501320503157e-05 2.80184961480648e-06 0.000134554693540847 6.63009014205344e-06 1.41566153533368e-05 1.35506847479321e-05 1.89622345583136e-05 4.77098461200339e-05 0.000256814152108168 0.000898289785824382 0.0028076815575772 0.000326286321317151 0 0 1.15043971352355e-05 0.00084093330140058 0.00188349756066587 0.001552277429132 1.64104160039196e-05 3.32149981952767e-05 6.93882983810523e-05 0.000273003185650975 0.000197771565681466 0.00201927561954692 XM_005197522.1 KANSL1L PREDICTED: Bos taurus KAT8 regulatory NSL complex subunit 1-like (KANSL1L), transcript variant X1, mRNA. 6e-20 104 98.33 0.0279488394126007 NM_152519.2 KANSL1L Homo sapiens KAT8 regulatory NSL complex subunit 1-like (KANSL1L), 4e-16 91.5 93.33 0.0279488394126007 0 noncoding ATATCCTTCATGCTTTATTCATTCAAACCTTTGTATTGATTGCTTCCTATGGAGTATACTGTTGATGGAACATAGTAATATCAAGGAAAGTAAAACTGAGATATGGGAATTAGTTTAATAGATTTCTAAAGCTTTGGTTGTGGTGTTTCTGGCTAGAATCATTCTGAACTAGGGTGCATTAAAAGAGGGAAAGGCATTAAAAAGCAAATTTTGGTAGCTGAAAAATGATATCAGTTGGCATAGAATGTAATAGAAACAATGTCTTTTACATAATACTGCCTCTTCAGACTGTCACTTTGGAATTAGTTTGGCTATATAGTATTTTTCTCTATAATTTTTCTTGTCTTAATGTAAATTTTATCCTTACAGGTCCATAGTCCCTTTCCTGTGGTTCCAAAAATCTGGAAAAAAAAAAAAAGTTTTCATAATTCATTTGGTGACACAGCCTGATCTGAAAATGATGTGAGGTTATTGTATTTCCTATGAGTATTTCACTGTAAAACTCAGTATTGATTGAGAACTGCCCTAGACTCCCATACAAGACTAAATTTCATGCAGAAAAATATGACTAATAGTGGAAGTGAATACAGATACTCATGTAAGTTCAGTATTTCAACAACTCATGTATGGAAATGGTATGTTTTATTTTTGCTTTTGTTTATTTTTTATGCATGTTGTCTTTGTAGGCAAATTTGTACAAAACACTTTCCTAATCAAATTAATACCTTTAGTGAGGAACTTTTCATAAGTTTTGAAAATAAAAAATCAAAGAGGGCTTATAGTTCCATTTAGTTCCTCAAATATCAAATTAAGCACATGGAAAAGAAATTAAGCAGTCTTCATAATAAGTGCGATTATCCCATGAGTGAAAGGCAACTTACCTCTTCTTCACCTAAATCATATTCATCCAAAGGCTGAAGAACAACCATCCTCCAGCTGTTGAAGATAGAACCAATTTCAAATAGCTTTTCTTAATCTATCTAAATGTAGCAATTTTATTCTATAAGCACAACCAATATAGTAGTGTTTTCTTTCTTTGGGATTTCCATAATTCAACTGGTTGTAGTATTTTAGTACTTCATTTTTTAAAAGAGACAAAATACTTGTACCATGAGAAGGGGACAAGGAGAAGACGAGGCTTTGCTTTGGGCCTTACAATAAACAGTCTCTTCTACATAGTTGCATTTTATACCTAAGAATGTACTAATTTTGAAATGAGTTAGTGGTATGCTGATAAACTGGCACAGAAAATAAAAAGGAAAAAAGCTGTGATTTGTAGCATTTGCCAGTTTGTTTGTGTGAAGACTCCCATCATGGCCTCACATCACAGGACTTGTATATTAAAAACCAGGTCAACCAGCGAGCTCCAGCCTACCACTGGAAACTGGAAAGACTGTTGCTATAGAACTTGTAACCACCAAGTGTTGTTTTTACTTAATATACAATGTATCAACAGATTCTCTGTAGGAATTCGTCTAATACTTGCTAGAGTATTAGGAGTTCTCTCACTGCCTCAAATCAATTATGAATAAAAGGATCAATTTAGCTAGAATAGAGATGGGTAGGAATAACTGCAGTTGTCATCAGCTGTCTTGTTTCTATCCTTTTCTATATCTACTTCTTGGTGCCAGATTTATAATCTTGAAAGTGCTTTCATTATCACTAAAAAATTTGACTAAGTTGGCTGCCAGGAGACAGATCTGTGTATGGTATTCGAGGACATCCACAACCTGGTTCCAGTTTATTTTTGAGCCTTCATTTCGTTTATCACTCTAAACAAAACCTTAGTCTCTGGCTTAGCCTTGCATGATTGCTCCTGTGCCTGAGTTATGGTCTTCCTGTGTGAACACACACTTTCTCCTTCTGCCCCACCCCCTTTTCCTAATATACTCCTAGGTCTTCCCACTCTTCTTGATATTTGACGTGTGTATTGCGGACCTGGAGATACATGAGAATCTTTTGTTGTCACAGGAGTGGTAGTTGCTTTCTTTGAACTCTGTGCAAATCTCCATTTTAAAGAGCAAAGATTGTTAATGGAATTATTTACATCCCTAAAGTACCTTTTAGTTCCATGTACACCATAGAAGACTAAATGTTGAATGAAAAAATAC TCONS_00106000 r 5' 0 TCONS_00106000 r 5' 0 EMBV3_34720 CCTCCACCCCCGACCCCTTCCTTCTTATCTACTGGGAGACTGTGCCCTCAACAAATTTTT Gene GeneID:408017|INSR:XM_002688832:132_cdna Constitutive 0 NULL GeneID:408017 7 GENE INSR ir-A insulin receptor EMBV3_38258 TATTGGCTGAGAAGTGGGGAACAGCCAGGAGCCCCAAACCTCCCTTGTTTTTTCCTCCAT Gene GeneID:534600|ACIN1:NM_001105410:206_cdna Constitutive 0 NULL GeneID:534600 10 GENE ACIN1 NULL apoptotic chromatin condensation inducer 1 EMBV3_42216 GGAAGAGAAGTTGTCCAAATACAAAGACAGGCAGCAGGAAGCCCCTGACCTCTTCCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32052 GGAAACTTGGAGCCATCCTTTAAGCCAACAAGACGCCCCTGGGTTTGAGCGGAAAGAACT Gene BVV0102_183841 + 0 NULL GK000003.2:102713310-102718080 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174360 TCONS_00174362 TCONS_00174363 TCONS_00174359 TCONS_00174361 1 XLOC_104593 Coding TCONS_00174359 XLOC_104593 Coding Coding ST3GAL3 3:102717698-102745550 j TSS129418 1795 1 TCONS_00174359_3 268 8 0.935837133316577 7.20596624900454e-12 4.3894128391484e-13 4.2059938058347e-05 7.47929726629466e-12 2.72539087730357e-06 1.34928193611305e-10 1.16880514234544e-09 0.000203232004203389 0.000712052857815303 0.000199400939783883 3.10803113645287e-05 2.35622335171037e-13 0.000354850296922503 0.000245625221995944 9.84618454616369e-05 0.00106593875612003 0 1.82290366262101e-08 3.54042243421481e-06 3.59735181487986e-12 2.87910304285202e-10 0.000342094733687192 0.000597931774594563 0.000220059214403259 6.28672979055734e-10 1.60818423769604e-13 4.13155843820421e-12 0.000583219868953016 2.70216443952945e-05 1.14016533095029e-12 NM_001002882.1 ST3GAL3 Bos taurus ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (ST3GAL3), mRNA. 0.0 2477 99.43 0.776044568245125 NM_174963.3 ST3GAL3 Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (ST3GAL3), transcript variant 1, mRNA. 0.0 1867 83.35 0.988857938718663 TCONS_00174359_3 sp|Q11203|SIAT6_HUMAN SIAT6_HUMAN CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase; 0.0 550 98.51 0.996268656716418 1 coding 0 0 0 0 0.0287522331126269 0.858694667745252 0.0372226701571235 0.464125471728662 GTCCACACCCAGAAAGTGACCAGGTTCTCGAAGCCAGCACCCATGTTCCTGGATGACTCCTTCCGCAAGTGGGCTAGGATCCGGGAATTTGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCTGTCACCAAAGAATACCGCCTGACCCCCGCCTTGGACAGCCTCAGCTGCCGTCGCTGCATCATCGTGGGCAACGGAGGTGTCCTGGCCAACAAGTCTCTGGGGTCGCGAATTGATGACTATGACATTGTGGTCAGACTGAACTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACCACACTACGCATCACCTACCCCGAGGGCGCCATGCAACGGCCTGAGCAGTACGAACGCGATTCCCTCTTTGTCCTCGCTGGCTTCAAGTGGCAGGACTTCAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTGAGTGCCTCGGATGGCTTCTGGAAATCTGTGGCTACTCGGGTGCCCAAGGAACCCCCCGAGATTCGCATCCTCAACCCATATTTCATCCAGGAAGCTGCCTTCACCCTCATCGGATTGCCTTTCAACAACGGTCTCATGGGCCGCGGGAACATCCCGACCCTCGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTTGCAGGCTTCGGCTACGACATGAGCACACCCAATGCCCCCCTGCACTACTATGAGGCCGTGCGCATGGCAGCCATCAGAGAGTCCTGGACGCACAACATTCAGCGAGAGAAAGAATTTCTGCGGAAACTGGTGAAAGCGCGTGTCATCACTGACCTCACCAGTGGTATCTGAGGTGCACCCAGCACACCGCCACAGAGGTCCAGCCACCACCCCCTGCCCACTTCACTGGCCTCGGCCTGGCTCTGCTTGAGAGGCGCGGGAGCCTTCAGACCGGGAGAAGGACCGTGCCACGTGGCCCCAGGGGTGGCGAGGCCCTGGCAGGGCAGCCAGAGCTACGTCTGCTCAGAGGCCAGCCTCAGAGCCCAGCACTCGGCCTTCAGCTCAGCCTGGGCCCTTGAAGCCAGAAGGCCAGGAGGCCACTGGTTGTGCCCAGCAGGCCCAGCATGCAGGAAGCGGACGCTAGGCAGCAAAGCTGCTGCCAGAATCATTTCTCCAATCAGTGTTCGGTGTATTATCACTTTGTGAATTTGGGGGGGGGATAATTTATTTTTTAATCAGGTTGGAGATGTCACGTTTGGTCCACTGGCCGTGCAGAAAGAGACCCACTAAAGGGCCCCTCAGGCAATGGTCCCAACAGGCTCCCCATAGAGTGGGGGTGCCAGGACTAGCCTGTGCCCTGCTCCATGGCCGAGGGGAGGTGGGCGGGATCTCAGGCCAACCCCCTCCAGTTCATGACAGTGTTTGGCCTTTCTTGGGGAACAGAGGGGATATTCCCACCCAGCTGCCTCACAGGGGAAACTTGGAGCCATCCTTTAAGCCAACAAGACGCCCCTGGGTTTGAGCGGAAAGAACTTCAGAGTTCCGGAGGCATGGCCTGGCCCAGCCTGATGGGAACGGCCGCCACCCCCACCCCAGCTGCAACCGACCCCCAGGACAGTGCTGCAGGCCTGGAGCAGCCTACCCGGCAACTCTTCTGGGTTTCAGCAACGAGACTGCCAGGCCCTCGGGTTCTGCCTTTAGCCTGGACCAGAGGGAAGTGAGGCACCAGGACTTCACCCAGGCTGCGGGAGGCCTGCTGGGAAGCCATCATGGAAGCAATAAAGCTCTTCCCTGAGCC EMBV3_21502 GACCGTCTTAGTCGTCATGGAAACCGCGAGGTGGAGCCCTGAAGGTAACAGATGGGAAAA Gene GeneID:540147|CDH22:XM_002692487:581_cdna Constitutive 0 NULL GeneID:540147 13 GENE CDH22 NULL cadherin 22, type 2 EMBV3_01857 CAGGTACCAATTTTTTGACAGCCTTGTAGTGAATCCTCTCCTGCTGTTTCTACGTCTGGC Gene GeneID:508731|ZMYM2:NM_001101907:31_cdna UTR3_Alt 2 NULL GeneID:508731 12 GENE ZMYM2 MGC165807 zinc finger, MYM-type 2 EMBV3_15893 CTCTGTGTTCTTCACTTGCCCTGGGATCTATTCCTGGCTTCTCACATCTGTGCAGTGACT Gene BVT0102_127826 - 0 NULL GK000029.2:35575691-36619710 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37102 CCCCCACCCCTTGTATACCCTTCCCTAACCCACAAAACTGCTAACGTTGTCTTAAGGTGA Gene GeneID:327716|GATA4:XM_002689464:26_cdna Constitutive 0 NULL GeneID:327716 8 GENE GATA4 NULL GATA binding protein 4 EMBV3_29462 GTGACACAAAAGCAACGAGTTTCATCAGCCTCACCATCTCAGACTCACAGCTCAAGGACT Gene GeneID:100296136|LOC100296136:XM_002690567:221_cdna Constitutive 0 NULL GeneID:100296136 10 GENE LOC100296136 NULL hypothetical protein LOC100296136 EMBV3_26193 CCTAGCTATAGACAGAAAATTAACCAAGACCATCCCTCACTAGCTCCTCCAGGGCCAGGC Gene GeneID:787681|PPIE:NM_001098161:337_cdna UTR3_Alt 3 NULL GeneID:787681 3 GENE PPIE NULL peptidylprolyl isomerase E (cyclophilin E) EMBV3_25766 GTCAACTCTTCAGTATGGAGGAAAACATGTTTCTGTAACAGAGAACACAGAGGCCTGCGG Gene GeneID:789854|TAF4:XM_002692259:1568_cdna Constitutive 0 NULL GeneID:789854 13 GENE TAF4 NULL TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa EMBV3_42737 AGGACTTCCCTGGTGGTTCCGTGGTTAAGAATTTCGCACTTCCAATCTTCCAATGCAGGG Gene BVT0102_226161 + 0 NULL GK000019.2:57839030-58426799 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18875 CCTGTGTTCCAACAAACCTATAACTCACCCCACTATTGTTCAGTCTAATCGCCTGTGGCC Gene BVT0101_010764 + 0 NULL GK000014.2:26117187-26180763 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051557 TCONS_00051559 TCONS_00051556 TCONS_00051558 1 XLOC_031228 Coding TCONS_00051559 XLOC_031228 Coding Coding FAM110B 14:26045711-26119954 j TSS38422 4770 1 TCONS_00051559_2 328 4 0.935804531127933 0.00168458451826544 0.00047218444722179 0.000711750342424481 0.000336669025421353 0.00118073950934974 0.000263796729185977 0.00040451066739218 0.00115814241639054 0.000847183116115332 0.000300176229086391 7.62278407378865e-17 7.5651510297983e-05 0.000122080997726801 0.000496884524606098 0.000194971123327293 1.95558257334159e-14 0 1.23917508755422e-07 0.000928043614250226 0.0012360750223566 0.000606398695763783 0 3.11591650643742e-08 2.10192784395214e-11 0.000777013165345271 0.000619423314396855 0.000678360339759197 1.08387838286563e-18 4.05809290373043e-12 3.32255605622732e-14 NM_001077018.1 FAM110B Bos taurus family with sequence similarity 110, member B (FAM110B), 0.0 1658 100.00 0.192452830188679 NM_147189.2 FAM110B Homo sapiens family with sequence similarity 110, member B (FAM110B), mRNA. 0.0 1914 74.92 0.605870020964361 TCONS_00051559_2 sp|Q2KJ38|F110B_BOVIN F110B_BOVIN Protein FAM110B; 0.0 584 86.05 0.996951219512195 2 coding 0 0 0 0 0.0100618829906768 0.976856838211391 -0.0272621862611237 0.603279247277739 CGCTCCTCATTGGTTGCCAGCCGTGCTGCTCGCCGGTTTGATAGGTTTCCACAGAACTCTTTATGCTGCGTTGGAGACACGGATACAGAAATACTCCGCTGCGTCCTGGCCACGGCCGAGGTGCTTAGCTGGTAACGTTACAGGAGGAATCGGGCACCCAGGAGAAGGCGGTCGTCTTTGTTGTGAGAGCAGGGCAGTCACCGGCTGCTGAAAGGGCTCAGGGAAAAAGTTTCAGCTCATGCTATTTCGTGCAGTGGAGAGTACTTGAAGGGAGCAAGGATTCCCTGCGATTCCTGCCTGCAACTGGGCAAACACTTATTCCCCTCTCAGCTCTGCCTGCAGTTGAACACAAAGACCTGGAGGAGACTCCCACATCCTTCGGGGAGGAGAAAGGAGCGGCGAGGCCCGATTAAAGGAACTTGGAGGCTGGTGGCCTCTCCGCACCGGCCGGCCGGCGAGGGGGCGAGGGGATTAGAGTCCCGGGGCAGTGACCGAGCAGGAGATGAGGCGCTGCCGCCGCCGCTGACCCTCGGTTCCGGACCATCCGCTGCGCTTTGTGCCGCCCGCACATGTGTCTGCCCGGCGCATCCGGAGGCGCGCACACGAGCATCCACCACGGCCGCCGGGGAGAGAGTGCCCGCCATGCCCACGGAGAGCCTACAGACAGGTAGCATGGTGAAGCCGGTCAGCCCCGCCGGCACCTTCACGTCGGCCGTGCCCCTGCGCATCCTCAACAAGGGGCCCGACTACTTTCGCCGCCAGGCGGAGCCCAACCCCAAGAGACTCAGCGCCGTGGAGCGGCTGGAGGCCGACAAGGCCAAGTACGTCAAGAGCCAGGAGGTCATCAACGCCAAGCAGGAGCCCGTGAAGCCGGCGGTGCTGGCCAAGCCCCCCGTCTGCCCCGCCGCCAAGCGCGCGCTCGGCAGCCCCACGCTCAAGGGCTTCGGCGGCGGCGGCGGCGGAGCCAAGAGCGAGGGGGGCGCGCCTCGCGAGACCCTGAAGCTGGAGATCCTCAAGAACATCCTCAACAGCTCCGAAGGCTCGAGCACGGGCTCGGGCCACAAGCACAGTGCGCGGAACTGGGACGCCTTTCTGCACGTGTCGCACAGCTCCTCGGACATCCGCCAGGGGCCCGGGGCCAGGCCCCTGAAGGCCATCCTCCCCTGCAGCAGTTCCGCCCCGCCGCTGCCCCCCAAGCCCAAGGTGGCCGCCCCGGCCGCAGTGAAGTCCCCCGAGGCCGAGGCGGCCGAGCCGGCTGGCGGGGTGGGCCGGAGACCCTCGCTGCAGCGCTCCAAGTCAGACTTGAGCGATAGGTATTTCCGCGTGGACGCCGACGTGGAGCGCTTCTTCAACTACTGCGGACTGGATCCAGAGGAGCTGGAGAACCTGGGCATGGAGAACTTCGCGCGGGCCAACTCGGACATCATCTCGCTCAACTTCCGCAGCGCCAGCATGATCAGCTCGGACTGCGAACAGTCTCAGGACAGTAACAGTGACCTTAGGAACGATGACAGTGCCAATGACCGGGTGCCCTACGGCATCTCCGCCATCGAGAGGAACGCGCGCATCATCAAGTGGTTGTACAGCATCAAACAGGCCAGGGAGTCGCAGAAGGTGTCCCACGTGTAAGAGGCAGCAGCGCGCCCGGAGGGAGGCAGGGGGGTCTCTGTCCGCGCCTCGGCACTTGTGAAGGTTGTGAGGTCTCCTTGAAGTGTTGTGAGCTTCTCCACTCTCTTTGTGTTGCTTGTTGTGCAATGTCTTTCCAGTTGCATGCCCGCCAACACGGGGACTGACCTGGCGTCCTCGGCTACCATCGCTGCAGAGCCTGGCCGGTCGCGCGTCACCCGCCCCAAAGTGTCAGGTCACATCCTAATTTAGGGCTTCAATCTTTGGCAAAACTGTTTACACGGAAAACGGTATACAACTTCTTCAATATTTATGTGGTTCTAGTGTTTTTATATCCCGCGCTATGGTGTCTTAATTAAAGGTTTTATCAACTGGCTTTTAAGTTGGGAGTAACATCTTTTTGAATTAAAAAAAAAAAAAGCCTATTTGCCTACATGTGAGATCCTAACGGGAAAATAAATGGGCTCTGCTATCAAACAGATAGTGAGGGATCCCAGAGAGACCCGGGCTGGGCTTTCTGAGAAAGAAAGTGGGGAATCCGATGTCAGTCATTTATTATTGACAGTCCTCTTGCCATTTACACAAGTAATGGTTGGGGACACGTATGTTCTGTGTCTGATTTGGTGTATAAACTTTGATGGTTCTGTGTAATACTGACCCCAAGGAAAGACAATCAGATACAATGAAGGGGATTAAATCAGGAGGTTGGGTGTTAAGAGGGGCTTGTTGCTATTGATCTGATTTGGGTTGATTTAGAAATTTTGACTATCAATCATTTGACAGAACTGGCCACCCTAGAGCTGATACTGAATTTTTTTTTTTTAAGTTAGTTTTTTGGTTGAGAACTCTAAGTGGATTCTCCTCCCTCCCTTTGTTGTAATTGTTTTATTTGGGAGAGGGGAATGGGGCTTGGGTGGTGGGAACTACCTGAAGACCACCGAACACAAATGGAAATGCCAGCCATATCAGTTTAGAGCCTTCTCTTCAGAAGTCAGTACCTTTGGTAGCTGAACCAGATCTGGGCAGCATGACTATGTCCTCATGCATATGTTAACCTGTGAGGCTGCAGGGAACTTGAAACATGACTCTGTGTAGCTTTTCAACCCGAAGATCCGTAGGGCTGCATATCAGCTTGTTCCCCCATAACCTGTCCTACAGGTGGTCTAGTTGGCTGTCCCTCAGCTGACAGTCATCCTGCAGTAGCCAAGGGGTCCACCTGGGATGCTCGGCTTCCTCGCTCTTATAGAAATGCCCTGAAGCTCCCAGCAGCACTGCCTTAGCCTTCATCAGCTCATAGGACACTTTTTATGCTGTAAATGCTGTAAGACTTTGTACATACTTCAGTTGTTTATGAAATCTTTAAGAAGAAGAAAAAACAAAGAAACGTTACTCTAATAAATAGCTCTGGTGCAGGCTTTCATGGTGGTGGTTTCTCTTTGTCTTTTCCTTCACTCCCTCCACACAAGTTTCACTTTGGACTGTGAGCCAGAAGGAGACTTTTGAGGGTCTTGAAGAAACAGCATTTCATTAAGTTATTTTCACCATATCACAATTATTCTGAACAGCTGTATTCTTCATTGTAGCTAGATCAGTGTGCTTTTTTGCTAAAATAGTTTCACCGGGGTTCCTAAAATCTGCTGCTGCTGCTTAGTTCACAACTTTCAGTTTTTTATCTTTTCTTAAAATCAGGATTTTTTACATCTTCCACCAAACTCTTAAGTTGTAATTACTTGTTACAACTTCTGACAGTTGAGTTCTGACAGTGGAGACATACCTTTGAAATTTATAGCCTCGTTCTTAATTGAACAAACTCAGGATCCTTAATGTTACATTTGTTTATATAGTAGTCCACTCATTCATTCATTCATTCCTCTATCAAAAGGGTATATGATGAGTGATTCCGTTTTCAGGCCTTACCATCGACCCAAGACTGCTGTGGTCAACAACACAGTATCTGCCTCAAGGAACTTAGATTTTCACTTGAATTTTCATTCTAGTGAAGTATCATTCCTCCCAGTGGACCTGTCTTATCTCCTGTTACTAATAGGACAGTGAGTATTCAACAGCTATTTAATGAATCAAGTTATTTGAAGATTAACATTTTTTAAAAGTTCCGTATAACATGTAAAAGAGGATTATTTTTAAAGTTTCAGAAACAATATGATTTCCAACTTTTACACTCACCAACATTTTCCTTTGAAAATCAGACTTGGTTCTTTAACTCTCTACTGGTTTTGAATTTTTCTGGTTCTCTTCTTAATTTTAGTTCAACTAGAACTCTACTTGCCCGAAGAGTCTGAAATACTGCTATGAGTGGTGATGGTAGAATGGATTAAAGATAATAGGATGAAAGCTTAATATTTTTATATACACACACATTTTCTTCCTTCATCATTTGGATAGAAATGAAGCTATTTAAAATATTCATGGCTTTAGTATTTATATACCCATCTCTTTCTGGGGCTATTGAAATACCAAAGATAGATGTTACTTTCCTAAAGTAACTGGTGTTGGGAGATGAGGGCTTGGCAAATTTAATATCACTGACTATGCTGTTTTAGTTATAGATTTTGTTTCAGTTCTTCCAGTGCTTCAAAACCACCTTAACCTGTGTTCCAACAAACCTATAACTCACCCCACTATTGTTCAGTCTAATCGTCTGTGGCCTTTATACCATGAACAAATGTGAGGCTTTGGGTTCTTATGGAACTTGGGAAGTCCTTATTTTCTTTTTGTCCTTGAAATTAGAGCTTCTATAAAAGATGATTTCAAATGCTTCACATTAAATCCAAGAGTAAGCCATTTCCTAATTGTGAAGTCCTTTTTGCAAAATGCTCACTTTTTTTTAGCTCATGGGTGTAAGTATATTGATAGTGTGTGTGCATGGGTGATGATACTGTTGGTGTGAATATAGAGCTGTAATATAGTTCAGCCCACTTTTATTCCCCCACACAGTGTAGAGTGACGCAGGATTGCACTAGCTGGCCCTAGAGACTACTTGTTTCTTTCTGCAAAGCAGCATCTTTTCCGACAATCCTCCCATACCCACCTCCTCTATCATTGACTCTGTTCAGGCTCTCTTCTTCTCTTGACTGCCCTGTTATTCCTACAACTTTCTAACTGGAGGTCCCCCTCTATCCAGTC EMBV3_28041 ACAGCTGCTGTGAGTCCACATCCTCGTGTGTGTCCACACTTTTTAGGCACCACGCCAAGG Gene GeneID:532839|RAP1GAP:NM_001076888:215_cdna Constitutive 1 NULL GeneID:532839 2 GENE RAP1GAP MGC139675 RAP1 GTPase activating protein EMBV3_26183 ACACAAGCACAAAGCGCGAGCATAAGTTAGACATGGTCACTGCCACCCCATGGCTCTTCT Gene GeneID:508443|ABCG4:NM_001105343:89_cdna Constitutive 0 NULL GeneID:508443 15 GENE ABCG4 NULL ATP-binding cassette, sub-family G (WHITE), member 4 EMBV3_38972 ACAGTAACCAGTCAGATGATGGCTCAGATACAGAGATGGCTTCTGGCTCCAACAGAACGC Gene GeneID:538649|FAM60A:NM_001076116:20_cdna UTR3_Alt 2 NULL GeneID:538649 5 GENE FAM60A NULL family with sequence similarity 60, member A EMBV3_24706 CTTACCATGGCTTGTTAACAGAGCTTGACAGCTTGTGTACTGTTTCACCCTCTTACATGC Gene BVV0101_032354 + 1 EMBV3_24470 GK000006.2:8432158-8683325 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202423 TCONS_00202419 TCONS_00202428 1 XLOC_123972 NonCoding TCONS_00202423 XLOC_123972 NonCoding NonCoding - 6:8321769-8467752 - TSS151921 1499 1 TCONS_00202423_2 70 0.348899266177452 3 0.989752161225357 0.000219898860019632 0.000198198971358084 0.000228506373630991 6.92544410909585e-05 0.000132428265840848 4.30686450868349e-122 2.23613907486663e-25 6.20856743141264e-42 0.000188056550708136 0 0 4.17187003571239e-164 7.09601896164118e-11 0 0.000166635141573429 0 0 0 0.000395275712136479 1.03251359257121e-39 8.6069118065027e-06 0 0 0 6.40777483392351e-05 1.4509412587683e-06 0.00032778588860788 0 0 0 XM_005201865.1 CLDN18 PREDICTED: Bos taurus claudin 18 (CLDN18), transcript variant X1, 4e-40 170 85.43 0.0993995997331554 0 noncoding 0 0 1 1 -0.0658927382855274 0.576353006528557 0.0206578642495912 0.692400585351426 CCTCATGGGAAGTAAGTGTGCAGTAGAGGGCCGCTCAGTGGGTGAGGGGTGCTTACTGTGCCTTAAGGGGTCGACTCAGGGGGCTTGAGGGGCTCAACCCTGCACATAGCAAAGAAAGGACTGGCCCTTGCCTGGCTTCTGGGCAGCGACACCCTCTGAGCCCTTGGAATATCCCACCTGATAAGAATGCTCCTGAGACCCTGGGCCACAGCACATAATTTCTGGTAACAACGTGGTTTACAGTGAACACCTGCTTTTATTCTCCCGCACCTGAACTGCACCATCAGTTTGGCCTCCGTGGGGGCTGGAGGCTGCATCGCTCAGGTCAGTTCGTGCGTGCTCCTGGCCTTGGTGACTGATTCCCAAGCAAGACCATGGATATTCAGTATTTTTAGGTATCTTTGGGCTTTCTTGGTGGCTCAACTGGGAAGAAGACTGCAATGAAGAAACACAGGAGACATGAGTTGGATCCCTGGGTTGGGAAGATTTCATGGAGGAAGAAATGGGAACCCACTCCAATATTCTTGCCTGGAGAATCCCATGAACAGAGGAGACTGGCAAGCTACAGTCCATGGGATTGCAAAGAGTTGGATGTAACTGAGCAGGAGCAAGTCTTCCTAATTAAATCCATCCTGCTTGGCCCTCCCACGTGATTGGACTTCTGCTCAGCACCCCGAGGGATGGATTACCTGATTTACATCCTGGCATCATGTGACTGCAGAGGACCACAGTGGCAGAGAGGCATCTCTCACCATTTATAACCACGCTCCCTTGGCATTTCTCTTGATTCCTTTAGGAGTAAACCAATATTTTGTGAATATAATGTTGTATGCAAACTTGGGAAGATTCCCACCCCCCGACCCGCCGTACATAACATCATCAGCTGTATTTAGTGAATTCCGGTGACCTTAGACAGTATATTTTTTCCCCTCTGCACCCATCAAAAATAGAAAGATTCCAAGAAAATGTATCCATAAGGGGAAGTTTGACTGTAACTAAACAGACAGATGTTTAAGAACATGCTTTTCTTAATCAAATATGGTCTGTGATGCACAGAGTATCAGAGGGCTTGAAAAAAGCCAAAACTACAGAAGCCTCCAAAACTAAAGAAGCCTCATGGAGCTGAGATATAAGCTTACCATGGCTTGTTAACAGAGCTTGACAGCTTGTGTACTGTTTCACCCTCTTACATGCCTAATAAAGTAATAAAAATGTATGCGGGATAAATAAAAAAGGTTCTGATTCGTGAGGCATAAAATCTCTGCTGTGAACTGGAATAGTTTTTTGAGTTACAGTTACATTTTTATTTGTAATTTTAAAAGTGCAGCCAACAGTTTGTAGAGCGCTAATGTACACACATGTGTTTTATTTGAATGTGTTCATTTACCTTTCACCATATATGCATGCACTTTTTATCAAGGATAAGATTTTGTTTTTAAATCGATTTTTCAGTAAAATGACTATTCTATTAATCTGTCTTTAAACACACTGTCTCTCTC TCONS_00204400 TCONS_00204401 r 5' 70032 TCONS_00204400 TCONS_00204401 r 5' 70032 EMBV3_40543 GAGCTGAAGCATGTCAGTGGCATGATGCTTGCCAAGCCAGACCTAGGCATCTAGGATAAT Gene GeneID:541180|FEM1C:NM_001101219:42_cdna UTR3_Alt 2 NULL GeneID:541180 10 GENE FEM1C NULL fem-1 homolog c (C. elegans) EMBV3_05465 GAGAGGGAAGTGGCGTGTCGGACTAGACGGCGTACCTCCTACTCTATGACATTTCCTAAA Gene BVT0101_031439 + 0 NULL GK000005.2:111723964-111824689 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196491 TCONS_00196492 1 XLOC_118353 Coding TCONS_00196492 XLOC_118353 Coding Coding ENTHD1 5:111750302-111766560 = TSS146205 592 1 TCONS_00196492_1 197 2 0.963707941194562 0.000423001786943123 8.61711853765204e-05 5.81510067932175e-05 1.40241268332171e-05 9.38735729671004e-06 0 2.44097338823409e-17 0 9.64633703671566e-05 0 3.86687412068669e-06 0 1.35902498542686e-11 0 1.10788623703433e-14 1.96515713654036e-43 0 7.97203100827578e-15 6.48645319261435e-15 0.000106270945145624 7.17834558948148e-11 0 0.00018806629179288 0 0 1.19011066244214e-05 0 0 5.45677409446145e-30 1.57469892231415e-09 NM_001205542.1 ENTHD1 Bos taurus ENTH domain containing 1 (ENTHD1), mRNA. 0.0 1068 100.00 0.998310810810811 NM_152512.3 ENTHD1 Homo sapiens ENTH domain containing 1 (ENTHD1), mRNA. 0.0 792 89.70 0.998310810810811 TCONS_00196492_1 sp|Q8IYW4|ENTD1_HUMAN ENTD1_HUMAN ENTH domain-containing protein 1; 3e-123 365 88.32 0.99492385786802 1 coding 0 0 0 0 -0.328108579733627 0.231995891382994 0.0160058821206287 0.761300166164877 ATGGCATTCAGGAGGCAAGTGAAAAACTTCGTGAAGAATTACTCAGATGCTGAAATAAAAGTCAGGGAAGCAACTTCTAATGACCCTTGGGGTCCTTCCAGTTCTCTAATGTTAGATATCAGCGACCTGACTTTCAACACAATTTCTCTCTCTGAAATTATGAACATGCTATGGCAGAGACTCAACGACCACGGGAAGAACTGGCGCCATGTGTATAAATCCCTTACCCTAATGGATTATCTCATCAAGAATGGATCAAAGAAAGTTATTCAGCATTGCAGAGAGGGGTACTGTAACCTTCAAACGCTAAAAGATTTTCAACACATAGATGAAGCTGGAAAAGATCAAGGTTATTATATCCGGGAAAAGTCAAAACAAGTTATAACGTTGCTGATGGACGAACAGTTGCTGCATAGAGAGAGGGAAGTGGCGTGTCGGACTAGACGGCGTACCTCCTACTCTATGACATTTCCTAAAAGATTACCTGGTGCGGGTAACTCACCAACAGCGTGCGCTTCTGCCCCCACACCAGAAATTCCTGTTTCAGAGAAGAAGAATAAGCTTCTTAAGATTGCACGGCTACATAATAAAA EMBV3_01192 AATTGAATGAGCCAAGAATAAGTTGCTGTCCCAGAAGGAGGGTACCTATAAGCTGAGCGC Gene GeneID:513156|XPNPEP1:NM_001075602:36_cdna Constitutive 0 NULL GeneID:513156 26 GENE XPNPEP1 NULL X-prolyl aminopeptidase (aminopeptidase P) 1, soluble EMBV3_17871 AGGGAAGGAAGACCCCTGGAACTCCATCACGGTCGGGTCGGCTGCCGTGGGTGGCGTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10670 CCACCCCCAACCTGGTACATTCTTCTCTCACTCCCTTTTCAGTCCAAGTGACTAACATTC Gene GeneID:506097|NFIL3:NM_001075240:81_cdna Constitutive 0 NULL GeneID:506097 8 GENE NFIL3 MGC151767 nuclear factor, interleukin 3 regulated EMBV3_10364 TCCATGGGAGCCCGAGCATCCACAACACAGCTCGCCGCCTGCAGCTCAGCCCGTGGGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01511 TCCCCGTGACCCAACTAAAGAGCCCGTGTGCTTCAGCCAAAGATCCCACATGACAGAAAA Gene GeneID:504301|ACADSB:NM_001017933:21_cdna Constitutive 0 NULL GeneID:504301 26 GENE ACADSB MGC142742 acyl-Coenzyme A dehydrogenase, short/branched chain EMBV3_37740 CAATCAGTAGACCATAATTACTGACCATTGGCCAAGATACTAACCTTGGAGGTAGCCTCC Gene BVT0102_355499 + 0 NULL GK000008.2:30876-71099 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34248 CACAACTGTACAGCAAGCTTACAGTAAGAGGTTCGTGTTTTATTCGAACTGATCAACTCG Variant GeneID:510301|ATP9B:NM_001080255:5_cdna 677^787 1 EMBV3_05835 GeneID:510301 24 GENE ATP9B MGC142821 ATPase, class II, type 9B EMBV3_21411 TTTTAAAAATTTGTTCATAAGCTACAAAGTATCCTATCTTTGTTTACAATATACAAAAAG Gene GeneID:780785|C3orf57:NM_001110774:176_cdna Constitutive 1 NULL GeneID:780785 1 GENE C3orf57 MGC139700 small subunit of serine palmitoyltransferase B EMBV3_35912 GTGTGGATGATTTCCTGCTTTTACTGTATGTTTGCTTTTACCGATGAGCCCTCCCATTTC Gene GeneID:781977|SECTM1:NM_001102326:165_cdna Constitutive 0 NULL GeneID:781977 19 GENE SECTM1 MGC160020 secreted and transmembrane 1 EMBV3_12829 AAACACCAGTCCCGTGTGGCCCCTGCCCATGGCTTGTTCTTGAAATCAGTGCTCTACGAA Gene GeneID:617640|PUSL1:XM_002694135:503_cdna Constitutive 3 NULL GeneID:617640 16 GENE PUSL1 NULL pseudouridylate synthase-like 1 EMBV3_38623 CCTCAGCCTGCTCTTGTTTGTAAAGCTACTTATTCCTGCCTGAGGGATTCTGGGAGAGTC Gene BVT0102_171650 + 0 NULL GK000018.2:51682972-51689624 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08663 GAAGTGACGTCTTGCCTAACGCTGATGGGACATGGTATCTTCGGGTTTCCTTGGATGTGG Gene GeneID:782023|CD1A:NM_001075382:15_cdna Constitutive 1 NULL GeneID:782023 3 GENE CD1A NULL CD1a molecule EMBV3_30868 GGACTCTGTCTACCTAGGATGACTCGCTTTACCTGGGAGCACTCACTCTATCTGGGAGGA Gene BVV0102_153635 - 1 EMBV3_18073 GK000003.2:120199805-120269770 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32674 TGTAAGGCCTAAGCCAAAGCCAGGGGATGGAGAATTTGTGGAAGTAATTTCCTTACCAAA Variant GeneID:614149|NUDT5:NM_001076314:14_cdna 690^821 4 EMBV3_05089 GeneID:614149 13 GENE NUDT5 MGC140268 nudix (nucleoside diphosphate linked moiety X)-type motif 5 EMBV3_14980 ACTATTCCCTCCCATAACTGGTGTCCCAGGACCCCTGACCTCACGAAATCTCTAACATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02889 AGCCAAGTCCAGGAAGCACAGAGAGTCCCAAATAGGATAAACCCAAGAACACACCAAGAC Gene BVT0102_202327 + 0 NULL GK000011.2:43864840-43885445 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024839 TCONS_00024842 TCONS_00024840 TCONS_00024833 TCONS_00024835 TCONS_00024841 TCONS_00024832 1 XLOC_014588 Coding TCONS_00024835 XLOC_014588 Coding Coding C11H2orf3 11:43787561-43871231 = TSS18134 8750 1 TCONS_00024835_1 782 0.339085714285714 17 0.895624424816838 6.39680146978263e-21 1.60290992781336e-06 3.74415793718729e-05 1.79559967782611e-13 4.15664115238278e-39 1.80093382456584e-11 7.60668156513523e-11 4.83653034443284e-13 3.29126276619494e-51 1.07181513417128e-11 8.42556612004752e-11 2.88990051579918e-12 1.27706382988289e-06 7.96959044210712e-08 1.77737323708426e-15 0.00173763891195725 9.12816997739279e-11 7.13343731175462e-26 2.27990081577916e-08 9.54905447924639e-06 8.95541080854106e-16 8.59104509491805e-06 0.000325619553645528 0.000349865279851954 3.67805479930381e-08 8.42229275926197e-13 3.58086542386952e-09 3.33063254741558e-07 2.86540948179243e-12 1.58437944847591e-15 XM_003586634.2 GCFC2 PREDICTED: Bos taurus GC-rich sequence DNA-binding factor 2 (GCFC2), transcript variant X1, mRNA. 0.0 1.123e+04 100.00 0.7112 NM_003203.4 GCFC2 Homo sapiens GC-rich sequence DNA-binding factor 2 (GCFC2), 0.0 3003 81.62 0.354514285714286 TCONS_00024835_1 sp|P16383|GCFC2_HUMAN GCFC2_HUMAN GC-rich sequence DNA-binding factor 2; 0.0 1173 77.14 0.99616368286445 1 coding 0 0 0 0 -0.175321780242145 0.321969943848597 0.0172671456785688 0.735593154639349 TCCTCGGCCATGGCTCACAGGCCGAAAAGAACGTTCCGGCCGCGCCGAGCAGATTCTAGTGACAGCGACGGCGCCCAGGAGACATTTGCTGAACCCGGGGCGACGGGGGAGCAGGCGGCCCGGGACCCTGCGGTGGAAGGACCACCGTCTGGAAGAGGCCACGCGGAGGTGGCTGAACTGCTCCGCCGAGGCCGGGGCCGCCGCCGCGGCCGGGCCTGGGCTAGTTCCCGGCACGCCGCGAGAGCGGCTCCGCGCTTGGACGAATCCTCGGACGTCCCAGAATCCAGAATGGTTGATCTTTCAGCCGACGAAGAGGATGGAGAACACCATTCTTCAGAAAGTAAAGATGATCAGAGTTCATCTCCCAACAGCTCTAGGACTCTGGAGGACGAGTTTTCATCAGTAGTAAATATCCCTGATGCAGCTGTTATGCAAGCAACCTACAGAAAATGCAAATTGGCCAGGGCCCAAGAAGACTATATTTCTTTGGATGTAAAACATACCTTCACCAACTCTGGTATGAAGAAAAACAGTGAAGATTCTGAAAGTGAGCCTGATGATTTTAAAGATATAATGCCATTTACCCCAAAGCCTCAAACACTTAGACAAAGAATGGCTGAAGAAACAACAACTAGAAATGAAGAAACAAGTGACGATAGTCAAGATGAAAAAACTCAAGATATTTGGGAGCAGCAGCAGATGAGGAAAGCTGTTAAAATCACAAAGGGACAAGACATAGATCTTTCTTACAGCCATGAATCTCAAACAGTGAAGAAGTTTGATGCTTCCATTTCATTTCCACCAGTAAGTTTAGAAATTATAAAGAAGAAACTAAATACTAGATTAACATTACTACAGGACACTCACCGCTCACATCTAAGAGAATATGAAAAATATATACAAGATATCAAGAGCTCAAAGAGTACCATCCAGAACCTAGAGAATTCATCAAATCAAACTCTAAGTTTTAGATTCTATAAAAGCATGAAAATTTATGTGGAAAATTTAATTGACTGTCTTAATGAAAAGATTATCAGCATCCAAGAAATAGAATCAGCCATGCACGCACTCCTTTTAAAACAAGCCATGATCTTTATGAAACGCAGGCAAGATGAATTAAAACATGAATCAGCGTATTTACAACAGTTATCATGCAAACCTGAGACATCAATAAATAAAAGCTTGGCTATGGATGAAAAAACTCAGTGGATTTTAGAAGAGGCTGAATCTCGAAGGGCACGAAGAAGACAAGCAAGGGTTCTTTCTGGGAATTGTACTCATGAAGAAGGAACATCTAGTGATGATGAACTGTCTTCAGCAGACATGATTGACTTCCAAAAAAGCCAAGGTGACATTTTACAGGATCATAAGAAGATTTTTGAAGATGTACACAGTGATTTTTGTAATATCCAGAATATTTTATTGAAATTTCGACAATGGCGAGAAAAGTTTCCTGATTCTTATTATGAAGCTTTCATTAGTTTATGCATTCCGAAGCTTTTAAATCCCCTAATACGATTTCAGTTGATTGACTGGAACCCTCTTAAGTTTGATTCCATAGGTTTAAAACAGATGCCATGGTTTACATCTATAGAAGAATTTATAGATTGCAGTATGGAAGATTCAAAGAAGGAAGATAGTTCTGATAAGAAAATCTTGTCTACTGTCATCAACAAAACAGTTATTCCTCGACTTATAGGCTTTGTAGAATTCATTTGGGATCCCTTGTCAACCACACAGACAACAAGTTTAGTAACGCAGTGCAGAATGATTCTTGAAGAACATTCCACTTGTGAAAATGAAGTTAATAAAGGCAAACAGGATTTACTTAAATCAATTGTTTCAAGAATGAAGAAGGCAATAGAAGATGATGTTTTTATTCCTCTGTATCCAAAGAGTGCTGTAGAAAACAGAACATCACCACATTCAAAGTTTCAAGAAAGACAGTTCTGGTCAGGTCTAAAGCTCTTTGGCAATATTCTTCTTTGGAATGAACTCCTCCCAGAAGACACCTTGCAAGAGCTAGGACTAGGGAAGCTGCTGAATCGTTACCTTATTATAGCTCTTCTCAATGCCATACCTGGCTCAGATGTTGTTAAAAAGTGCAGCCAGATAGCAGCATATTTACCAGAAAAGTGGTTCCAAAACTCTGCCATGAGAACATCCATTCCCCAGCTAGAAAATTTCATCCAGTTTTTACTGCAGTCTGCACGTAAATTATCTAGAAATGAAATCAGGGATGAACTCAAAGAAATAATTCTTATTCTGGTGAAAATAAAAGCTTTGAATCAAGCAGAATCCTTCATAGAAGAATGTCACCTAGACCATCTTAGATCAGTAATTAAAGAATTTGAGTAAACTTTATAGGAAAGTACTAAAATGAGATTTTAATATAGTCACACTTGGCTGTTTTGCTTGTAGAAAAAGAAAAAAAGGTGTTCCCTTTTCTTTATTCCCAATAATGGAGGAGAGAATTTCCTAAACCAAAAGAATAGCACTCTGTCCCTCCATTCCCTCTATCTTCTGCCTTCTGGTATCTTGAAAGACTGAGCCTCCCCTTTATGAGTGTTTGCAGGAATTAAATACACAGGAACAGTAGGAGTTTAACATATTTCCATTTGATTCTTCTGATGACTTTTCCAGTTTAAGAAAGGACTTGAAGCTTATTGTAGCTGTTTTGGCTTTGCTGAGTCTTCTGTCCTGAACCATAAAAACATCTTTTAGTTCTCTCTATTTTAGCAATCTCTGTTTTTAACTCATTTGTATGAGTTAAAATGAAAATCTTAATTGGAATGAATTACTTATAAAGTATTCTGATTAAGGCATTTCAGAGCTACTAATGCTTGTCAGATTGTGCTTCAGAATCTATACCAGTATATTGTTCTAACACAAGTCTGAGAACAGCCAATGAATCTCTGCCAGCAGTATTTTTTTAACTCATTTGTACTTAATAGGTGAAGAAAAAAATCTTATTTTGATTATTTATATTGACTATTAGAGAGTGACTTCTTGTTTTCTTGGCCATTTGTAATTCTTTTTGAAGTATCTATTTTTTTCCTTACGGATTTGTAAGAGCTTTATATTTTAAAGATACTGATGGTTTGGCAGTCCAGTGGTTAGGACTCTGCACTTTCACTGCAGAGGGCATGGGTTTGACCCCTGGTCAGGGAATTAAGATCCCACAAGCCACATGGTATGGCCAAAAATGAAAACAAAACAAAAAGATGACTGACGTAGTGCCCACACTGTGTTACAGTTTTCCTCATTTGCTGTTTTCTTTAAATGTGTGTATGAGTTTTGGTGTACTAAGTTATTGCTTGTTTGGTAGTTACTACTATTTTTTGCTATGCTTTTTTGTGTGTTTGTCACGGTGGTGGTAGGCTTAGAGAGGAAACAAGTATTTTAAATATTCAGAACATATGATTCATTTTTTTAAAATGTGTGTGATTAAGAATGTGAGACAGGGTCATTGAATCAAAAAGAAATTGAGAACATTTTTCACAGTAAGTTTACTGATAATTTTTCTTAAATCTATTTGTTTAAATAACTTTCAGGAAGTCCTAAATGTATTCTGCAAATTGTTGCCCAAAAGATAAATCAGGAAAAGTTGATTATATGTCCAGTTTAATAGTTTGAATAAAGAACCAGCCTTGAACTCCATATGTAGGGTTTGAGCATGTGGCTTCTAACATCATCAACACTAGTTTTGAAGCTGCATGTAATAAATTTTCTCAGAGTGGTATGTGATTTCTACCATAGTGAAGATTCATGATTCACTAGTATGAACAGTTTCTTAAAGTTTATTTTAGTTATACAAATTATACAGAACAGAATCTCATCTAGAAAATTCAAGCCATTGCTAAAAAAAGTCGTTTTCTTACACAATTATTATTCCCAGAAGTAACTGCTATTTTCACTTTGTTATCCTTTCAGAACTTTTCTCTACTTAAAAAGTATGTACACATATGTCTATACACAGCTTTATTTTTTATATGTGGCAAATATTTTATTGTGTATTAAATTTATAATTTTTTATTGTTAAAAGTGTACACCTGAAATTTCCCTATGATTTTTGCCTTTGTAATTAAAGGTGTGTTAGATGATCCCTTACATTTTTTACTTGGGTAGAGAGATTTCTCTTGCTTTTTGTAGAATTTGAAAATATTAGAACTACTTTTTGATGAGGAACACAGGTATACGATAGGGAACACAGGTATACCTGTGGCGAATTCATTTCAATATTTGGCAAAACTAATACAATATTGTAAAGTTTAAAAATAAAATTAAAAAAAAGAAAAAGAAAATATTAGAACTACTTTTAAAACTGCAAATTGATTTAAACTCCCAGTAGTTTTGAAATTTCATTATGCTTGCGGTTTGAATCTCAGGATTTTTATCCATCATATACTGTAACTAAGGATATTCAAAAACATTTGTGAAGACTGCCTAATCCTCAATGCAGAGTTCTTTTTTTTTTCCTGTTACTGTGAAATGGATGAAGAAATGGAATGAAGAAGAGAAACGCCAACTAACAAAAACAAACCTTTGAGTTAACAACTTACCTCACACCTCAGTTCTTTCTCTGGATTTTTTCAGGTTTTTGTTCACTTAAAGAATGTAAAATTTTTACAGAACCAGATAAATTACCTTTTTGTTTTTACTTTTTTATATGGCTTTTAGGAACTTTTCAGTGGCCATGAAAATATACCTCAGAACAGTTAGGTTATTTTATGTAGATGACTCTATAAAATCTGAAAAAAATATTATGAAAAATAGACCAATATTCCTCATGAATATAAAAATAAAAGTCCTTCAAATACTAACAAACTGAACCCAGCAATGTATAAAAAGGAAAATAATAATACATTATGACCAAATAGGTTTTATTCCAGGAAGAGAAGTTCGGCTTAACATTAGAAATTTAATCAGTGTAATTCACCTATGAACAGAATAAAAGAGGAAAACCATACGATCATCCAATGATTACAGAAAAAGCATTGGACAAAATTCAACACCCTTTCCCAGTACACAAACAGGAATATAAATTATTTAATAAAGAGCATCTGCAAATGAACATCCATATTTAGCATCATACTTAATGGTAAAGTATTAATGCAAGGAGGTCTACTCTCACCTTTTCTGTTCAGCATTGTTCTGTAGGTCCTAACCATGCAGTTGGTCAAGAAAGAGACATAAAAGTTAAAACACAAGAGTTGAATCATTATTCTCAAGTGACAAGATTGTTTACATTGAAAACCTTATGCACTCTACCAAAAAAAAAAATCTGGATTTAGCAACATTTTACAAAACTCAAAGCCTACGGATGTACTAGTGATCTAATTGGAAACAAGTTTTAAAACAATAATACTTCAGTAGCCTTGGAAAACATCACATATCTAGGAATAAATCTATAGAAAGACCGTGCACTGAGTAGTACACAAATTGCTGAGGAAAAAAAATGTGTAAACCTAAATAAAGAAATAGACATCATGTTTATAAATTGGAAAACTCAGTTATTGTTTCAGGTATCTTCTTCTTATATTGATTAATATCAATTGTTATGCAGTCCCTATCAAAATTCTATCAGACTTTTAAAAAAAAGAACAAAATGATTGATTAAAATACATAAAAATTAAAGTTTAGATGTACAGAGACCTTAAAATAGCCAAAACAATCTTGAAACAGAATAACAAATTGGAAGACTTGTTCTTTCTGAATTCAGGACTTACTATAAAGCTACAGTAATCAAGTCTTTGGTATTAGGATAAGAATAAACTAATACATCAGTGGAACAGAATCAAGAGTCCAGGAACAGACCTAAATATAAATAATCAATTTTTGACCACAGTATCAAGTTAATACATCATAAAAGGAGAGTATAACAATATTGGTAGAACAGTTGAATAAGAAATAGAATGAACCTTAACCCTTATTTTCTACACACCCACACAGATGAATCAGATCTAAATGTAAAGCCTAGAGACAAAAGCTTGCGAGGACAAACATAGACTGTCTTTGACACTGAAATAGAGAAAAGATTTCAGGGGGTAGGGCACAGAAGACACTAACCAAAAAAGAAAAAAAGGATAAGTTGGACTTTTTCAAAATTTAAAATTTATTCAAAAGTATTCTGTATCTTAGAGCCACAGCAAGACGGAAGGAGGGGCACAATCATGATAAAAGTCAAATCCCATACTCGCCAGGTGGGTGACCCATAAACTGGAGACCAGTAATATCAAAGAAGTTCTCCCACTGTTTTGAAGGTTCTGAACCACATGTCAGGCTTCCCACCCTGGGGACCTAACAAATGGACTGGGAATCCCCAGGGAATCTGACTTCGAGGGCCAGAGGGATTTGATTACATGACTTCTACAGGACTGGGGAAAAGAGAACCTCCAGGCTTGGCAGGCACAAACAAAACCTTGAACACACCAAGACTCAGAGGAAAGAAGCAGTGACCTCCCAGGAGACTGAACCAAAACAACTTGCTGGTGTTGGGGGGTCTCTTGTGGAGGTGTTGGTCGGCAGGGGCTCACCACGGGATGGGGGCACTGGCAGCAGCAGTCTGGGAAGGTCACTCCCTGGTGTAAACCCTCTTCAAGGTCACCATTAATGCGGCCATGGAGCTGGGTCACCTCAGGCCAAAACTACCAGAGAGGGAGTGCAACCCCACCAAAAGCTTTACTGAGCAAGACCCTGCCTACCAGAGAAAGACCTAGTTTTTCCCACTATCAGCCTCTCCCATCAGAAGGATTACATAAGCCTCTTAACCTCCTCCATTAGAGGGCAGACAGAAGAAGCAAGAAGAACCACAGTCCCCTAGTGACTAACAAACCACATTACAGAAAGTTAATCAGCCCGAAAAAGCAGAAAGTTATGTCCTGGATGAAGGGATAAGATAAAACCCCAGAAAAACAACTAAATGAAGTGGACATAGGTAGCCTTCCAGAAAGAGAATTCAGAATAATGATAGTGAAGATGTTTTAGGATCTCAGAAAAAAAATGGAGGCAAAGCTTGAGAAAATGCAAAGAAATGTTTACCAAAGACCTAGAAGAATTAAAGAACAAACAGGTGAATAATACACTAGAAGGAATCAATAGCAGAATAACTGAGGCAAAAGAATGGATAAATGACCTGGAGGACAGATTGGTGGAAATCACTGCCGCAGAACAGAATATAGGGGGGAAAAAGACAAGAGACTTCTGGGACAACAGTAAATGCACCAACATTTGCATTATAGGGGTCCCAGAAGGAGAAGAGAGAAAGGACCTGAGAAAATATTTGAAGAGGTAATGGCTGAAAACTTCCATAACATGGGAAAGGAAATAGCCAAGTCCAGGAAGCACAGAGAGTCCCAAATAGGATAAACCCAAGAACACACCAAGACACATAATAATCAAGCTGACAAAAACTAAAGACAGAGATGAAATATTAAAAGCAGCAAGGGGAAAATGACAACATACAGGGGAACTCCCATCAAGCTATTAGCTGATTTCTCAACAGAAACTACAAGCCAGAGAGAATAACATGATACATTGAAAGTGATGAAAGGAAAGACCCTACAGCAAAGAATACTCTACCCAGCAAGACTCTCCTTCAGATTTGATGGAGAAATCAAAAGCTTTCCAGACAAGCAATAGTTAAGCAAATTCAGCCACCAAACCAACAAAGGCTAAAGGAACACCAACAACAAATGCTAAAGGAACTTCTCTAGGCAGGAAACAAGAGAAGGAAAAGACCTACCTACAGAAAATAAACCCAAAACAATTAAGAAGACGGTAATAGGATCATACATATTGATAATTACCTTAAATGTAAATGGATTAAATGCACCGACCAAAAGACATAGACTGACTAGGTAGATGAAAATATGTGTATGTATGCACTTCCATTTACCACATCACTCTGCTTGCCCCCCCCCCCAAATTTTTATTATTTTATATTGTTAGGTTAATCGTATTCCTATTATGACTTGCAGATGTAATTATCTTTTATTTTTTGTCTGGCTACTGATTGTGAAAATTGATACACATCTTTGACTGTAGTGATTATGTAACAATTACTTAATACCATTGTATCATGATTGGTCAACCGAAGAATAATAGAATTCCGTATCACCAAAGCAACCGTTTAATAGAAAATCTGTAATCACTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCTCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTAAAGGAGATCAGTCCTGGGTGTTCTTCGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCACTGGAAAAGACTGTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACAACAGAGGATGAGATGGCTGGATGGCATCACCTACTCGATGGACGTGAGTTTGGGTGAACTCCGGGAATTGGTGATGGACAGGGAGGCCTGGCGTGCTGCAATTCATGGGGTCGCAAAGAGTTGGACATGACTGAGCGATTGAACTGAACTGAATCAGTTTTTAAAATCCATATGCATATCAAAATTATCTTGGAATTTTTTGAAAAATACAAATATTCAGGTATTATTTTTTCACCAGAGCTCCAGATATGTTTCTAATGAGCAGCCATGTTTAAAAACAACTGGACTGTATGAAGACCTTTTACTTTTATCTAGTTTGTTTCACTTTTTCTATTTCATATTCAGTGCTCCCATTTCCTTTAGTTTTCTAGTTACTCTCTC EMBV3_16962 ACAGCAGTAGCCACGTCCAAGAGCACTGAACACTGAAGCCAGCCCCACTCTATCACATTT Gene BVV0102_037404 + 0 NULL GK000006.2:70003064-70027864 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21247 GACAGCGGATGTTACAGGTGGCATCTCAAGAGTTCTATCCGGGACCCCCCATGATGGACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34556 AAACAGAACCCGCGTGCCTTTTCTCCGTCAGGCCTCAAGAACTTTACCGAGCATCGCTTT Gene GeneID:100297608|LOC100297608:XM_002694589:672_cdna Constitutive 0 NULL GeneID:100297608 17 GENE LOC100297608 NULL hypothetical protein LOC100297608 EMBV3_01142 AGCTTCAGGATACGTGGACAGGGAGACGTTCTTTAAAATCTGTGGCTCTTACCAACTCCC Gene GeneID:510124|EFHC1:XM_002697283:63_cdna Constitutive 0 NULL GeneID:510124 23 GENE EFHC1 NULL EF-hand domain (C-terminal) containing 1 EMBV3_11584 GGGCACCGGAGGCAGAGAAACCCAAAAGAGAATCAGGGAATCCTGGGCGCAGCCCACAAT Variant GeneID:282656|RPGRIP1:NM_181034:28_cdna 431^792 1 EMBV3_22088 GeneID:282656 10 GENE RPGRIP1 NULL retinitis pigmentosa GTPase regulator interacting protein 1 EMBV3_21992 CCTTCAGTAGCAACTCAGGCACAGTCAAGAGATATCCATGTTCAGTCTGGAAGGTTGGGG Gene GeneID:517877|LOC517877:XM_002707806:312_cdna Constitutive 0 NULL GeneID:517877 3 GENE LOC517877 NULL hypothetical LOC517877 EMBV3_00082 TGAGCAGGTGCCTGGCTTCATACCCTGAGCCTCCTGGCTACATCTTTGAGGAAATAGATG Gene GeneID:539526|LOC539526:NM_001076170:11_cdna Constitutive 1 NULL GeneID:539526 8 GENE LOC539526 NULL hypothetical LOC539526 EMBV3_25900 CAGTAAGCAGATACTATTTATTTAGGTTGGTGTAAAGGTAATTACAGTTTTGCATTGTTG Gene GeneID:100125239|CCDC127:NM_001103318:2_cdna Constitutive 1 NULL GeneID:100125239 20 GENE CCDC127 MGC137900 coiled-coil domain containing 127 EMBV3_13067 GTCATGAAGACTTTTCTGCTGACTTTGGCTGCACTGCTCCTCTCATCCCAGGTCATTCCA Gene GeneID:768232|DEFB122:NM_001078107:1381_cdna Constitutive 0 NULL GeneID:768232 13 GENE DEFB122 MGC151929 beta-defensin 122 EMBV3_21826 AACAAAGCATAGTTACCATAGGAGGGCGCATCCTGTCGCTCGACTTCCTCAGCAGCTATT Gene BVT0102_041178 + 1 EMBV3_17205 GK000002.2:42444577-42762912 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105147 1 XLOC_062512 NonCoding TCONS_00105147 XLOC_062512 NonCoding NonCoding - 2:42597365-42598015 - TSS77675 289 2 0.557781201848998 0.000753257201530986 0.00125170727498713 6.40415337323478e-05 0 5.12509770797666e-05 0 0.000221967846664126 0 0.00032761756513866 0 0 0 0 0 0 0 0 0 0.000818826913448815 0.000174187019958191 0 0 0 0 0.000479480105303014 0.000146272648718368 0.000263560795943191 0 0 0 0 noncoding 0 0 0 0 -0.047879725149317 0.657161769152911 0.00956534483812257 0.850240706216039 CTCTAGGACTATGGCATTCATTTCCCAGCAACTGGGAATGTTGGTGGCTAACTTCTCTCAGGGAACCCAGCCTGTGACAGTGGCACACTGGTCTGAACAATGACTACTTATGTCTTTCTGACAATCAGGAAGTCAAGACTATAACATTGCTCTGTTGACTTATTAACAAAGCATAGTTACCATAGGAGGGCGCATCCTGTCGCTCGACTTCCTCAGCAGCTATTTGTCTACTGATTTTACTGTTTTCTCTAATGAAAGCCCACTGCCACAAATGATTTGTTCACTTTGT TCONS_00105132 s 5' 109049 TCONS_00105132 s 5' 109276 EMBV3_31846 CTATATTCTGCGGCCTGTTTTCCAGCAAAGAAATGGGATTTGACCGATATAAAATGGTGG Variant GeneID:504554|TCTEX1D2:NM_001166555:29_cdna 263^396 1 EMBV3_00325 GeneID:504554 1 GENE TCTEX1D2 NULL Tctex1 domain containing 2 EMBV3_13669 ACCTTGGGCAGAGGGAGCAGGAAGGAGGCAGAGGAGAAAGAAGCTGGCAGGAATGTGATA Gene GeneID:528708|LOC528708:XM_002691058:478_cdna Constitutive 0 NULL GeneID:528708 10 GENE LOC528708 NULL hypothetical LOC528708 EMBV3_16058 ATGCCTGAACTGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:523702|LOC523702:XM_002690003:19_cdna Constitutive 0 NULL GeneID:523702 9 GENE LOC523702 NULL similar to histone cluster 1, H2bd EMBV3_41290 TTTCAGAACGGAAGTTCTGATAATATGTGTATTCACAACATTTTATTGGATTTATCTTAA Gene GeneID:767875|HMGN5:XM_002699936:91_cdna Constitutive 1 NULL GeneID:767875 X GENE HMGN5 NSBP1 high-mobility group nucleosome binding domain 5 EMBV3_27758 TGTTCCGCTAGGCTGTTACACTGGTCAGCCCCTTCTCCACCCTGAGTTACACGGTCTTCT Gene GeneID:282149|BCKDHA:NM_174506:520_cdna Constitutive 0 NULL GeneID:282149 18 GENE BCKDHA NULL branched chain keto acid dehydrogenase E1, alpha polypeptide EMBV3_41865 CTGTGCATAACCATTCACCAAATACTGCTGCTCTGGTTTCTTGAAGGAAACGGTCTGTGC Gene GeneID:100140337|LOC100140337:NM_001135578:176_cdna UTR3_Alt 1 NULL GeneID:100140337 23 GENE LOC100140337 NULL hypothetical protein LOC100140337 EMBV3_00444 GCACTTTGAGAGCAAGCATCCTAAGACTCCACTTCCTCCAGAATTAGCTGATGTTCAGGC Gene GeneID:614279|MGC133632:XM_002692797:93_cdna UTR3_Alt 3 NULL GeneID:614279 14 GENE MGC133632 NULL hypothetical protein LOC614279 EMBV3_19011 AAGCTTCTGGCTGGCTTCACCTTCTGGATGGTCAAAAGAGAACCCCAGGTTCTTGGGTAC Gene GeneID:614824|HKDC1:XM_002698865:457_cdna Constitutive 0 NULL GeneID:614824 28 GENE HKDC1 NULL hexokinase domain containing 1 EMBV3_24742 ACTTCTTGATCCCGTTTCCACCACCCCCACTCCCTAGCACACATACCCGCACACTGTTTC Gene GeneID:507477|ALDH7A1:NM_001045969:31_cdna UTR3_Alt 2 NULL GeneID:507477 7 GENE ALDH7A1 MGC128050 aldehyde dehydrogenase 7 family, member A1 EMBV3_40967 AGCTGCCCAAGTCTGGTCTCCTCATGGCACTCCTGGGCATCATCTTTATGAAGGGTAACT Gene GeneID:782877|LOC782877:XM_002700300:22_cdna Constitutive 0 NULL GeneID:782877 X GENE LOC782877 NULL similar to melanoma antigen family B, 4 EMBV3_04980 ACGCCGTGAAGTATAACCCTACTCCTTCTAAGCAGCTCCTAACCTGGGGGACATTGGATG Gene GeneID:506812|CPT1A:XM_002699420:83_cdna Constitutive 0 NULL GeneID:506812 29 GENE CPT1A NULL carnitine palmitoyltransferase 1A (liver) EMBV3_18514 GCTAGCTGTTGCCCTGGATCTACTTATTTAGGAATGTACTTCTACTGCAGAAAACTTGCC Gene GeneID:615932|CCNB1IP1:NM_001046565:97_cdna Constitutive 0 NULL GeneID:615932 10 GENE CCNB1IP1 MGC134598 cyclin B1 interacting protein 1 EMBV3_18574 GCAGGACATGGAACAGGCAATGACTCCCTCAGAAATGGCAAATTCACTTGGGTTACCTGC Gene GeneID:517345|ARL1:NM_001046229:1025_cdna Constitutive 0 NULL GeneID:517345 5 GENE ARL1 MGC134037 ADP-ribosylation factor-like 1 EMBV3_26224 GAAAACCCGATTTCCTAATTCCAGGGGAAAGGGAGAGAGAGGAGGTAGATGGGGGAAGAA Gene BVT0102_102113 + 0 NULL GK000019.2:41196949-41222311 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093865 TCONS_00093872 TCONS_00093852 TCONS_00093869 TCONS_00093866 TCONS_00093870 TCONS_00093868 TCONS_00093863 TCONS_00093867 TCONS_00093864 1 XLOC_057274 Coding TCONS_00093867 XLOC_057274 Coding Coding CDC6 19:41185702-41199784 j TSS70321 5407 1 TCONS_00093867_3 418 11 0.616788580356509 0.000247193446875301 0.0011656268683198 0.000196974317737702 0.00078588221672579 1.72172817625949e-11 4.87802471948897e-05 6.03222948629574e-05 1.76105929838835e-06 0.00193182701440717 6.48109384480042e-05 0.000125338741450938 0.000104532884633651 8.44817718981243e-05 4.75012252385261e-05 0.000516852354218419 6.83150731091322e-77 0 1.47306343984485e-18 0.000698041906930145 0.00285623564285281 0.000978640884178791 7.5391518487002e-76 0.000107386547068673 2.89330188516248e-06 0.000779907273464281 0.00017584153018279 0.000205364641959981 1.05080940031956e-08 1.929571618267e-91 1.47013750579595e-06 XM_005220728.1 CDC6 PREDICTED: Bos taurus cell division cycle 6 homolog (S. cerevisiae) (CDC6), transcript variant X2, mRNA. 0.0 3067 99.71 0.316811540595524 NM_001254.3 CDC6 Homo sapiens cell division cycle 6 (CDC6), mRNA. 0.0 1712 85.46 0.274828925466987 TCONS_00093867_3 sp|Q99741|CDC6_HUMAN CDC6_HUMAN Cell division control protein 6 homolog; 0.0 753 87.26 0.992822966507177 3 coding 1 0 1 1 -0.016128013105496 0.908167827297993 0.0123629241717416 0.858594927427907 NNCAGCCGGACTCACACGGCCCCGGCGCAACCGCGCGTCTTTCTGGAGAGGCCCCGGATGTAAACGGATCTGTGGGCGTGGCCTCACGGTGGCGCTAAGACCTGGGGCTCTCTTATTGGTTGTATACCTTCCGGCTTGATTGGCTGTGAAGGAGGGGGCTGCCTCCAAGGCGCGCGCGGCGCTCTGGCGACACCCAATCAGAAGCGTGGCCGGGCGTTGGCGGGAGGCGGGAAAGCTGCGGCTGTGCAGATTTGGCGCGAGCGTGGCTGGGCTTTGCTGCTGTCGGTGTGGGGTTTATCCAGCAGCTTGTCGTGGACAGTCCCTGAAGTTGTCTGCCGGAGACGTGAGGAAGAGCCGGCACCGAGGTGACGCAGCCCTGTATGGTGGAAAGGAGAGGAGGCCCGGGTCCTTGGGGACGGCGGAGTTTGTGAGAGCCTGGGGCAAGGACCGCGGGAGGAGAGCTCAGATCGCCAGAAGCTGTGCTGCCATCATGCCTCGAACCCGCTCCCAGTCACAGGCTACAATCAGTTTTCCAAAAAAGAAACCGTCTCGGACAGTGGACAAAGCTAAAAGCTCCAGTGACACCAAACTAGAATTGACAAATGCCCAGGCTATCCTGTGTTCTCCTCGTGCAGAAATTCTGCCTCTTAGCCCCAGAAAACGTCTGGGTGACGACAACCTGTGCAACACTCCCCGTTTATCTCCCTGTTCTCCACCAAAGCAAGGCAAGAAAGAGAATGGTCCCCCTCGCTCACAGACGTCAAAGGGACGCAGATTGGTATTTGACAGTCAGCTGACAACTAAGTCTCCTAGCAAAAGAGAACACACCAGAGTTCACCAAAACAAAATACATCCCTCAGTTCCAAAAGGTCAGGACATCACAACCAATTCTGAACAGAGGTGTCCGCCGGAGAAAGAATCTGCATGTCTGAGACTGTTCAAGCAAGAAGGCACTTGCTACCAGCAAGCGAAACAGGTCCTGACTACAGCTGTCCCGGATCAGCTGCCTGCCAGGGAAAAGGAGATGGATGTCATCAGGAATTTCCTAAGGGAGCACATCTATGGGAAAAAAGCTGGAAGTCTTTATCTTTCTGGTGCTCCTGGAACTGGAAAAACTGCCTGCTTAAGCCGAATTCTACAAGACCTCAAGAAGGAACTAAAAGGCTTTAAAACTATCGTGCTGAATTGCATGTCCTTGAGGAGTGCCCAGGCTGTATTCCCAGCCATTGCTCAGGAGATTTGTCAGGAAGAAGTATCCAGGCCAGCTGGGAAGGACATGATGAGGAGACTGGAAAACCATATGACTGCAGAGAAGGGCCCCATGATTGTGTTGGTGTTGGACGAGATGGATCAGCTGGACAGCAGAGGGCAGGATGTCTTGTACACACTCTTTGAATGGCCGTGGCTAAGCAATTCTCGGTTGGTGCTGATTGGTATTGCTAATACTCTGGATCTCACAGACAGAATTCTGCCGAGGCTTCAAGCTAGAGAAAAATGCAAGCCACAGCTGTTGAACTTCCCACCTTATACCAAAAATCAGATAGCCACCATCTTGCAGGATCGACTGAATCAGGCATCTAATGACCAGGTCCTAGACAATGCTGCCATTCAGTTCTGCGCCCGCAAAGTCTCTGCTGTTTCGGGAGATGTTCGCAAAGCGCTTGATATTTGCAGGAGGGCTATTGAAGTTGTAGAGTCAGATGTCAAAAGTCAGACTATCCTCAAACCACTGTCTGAATTTACATGAAGCCTACAGTAACGTCTGTCGCAAACAGCAGGTGGCAGCTGTGGCCCAGTCGGAGTGTTTGTCACTTTCCGGTCTCTTGGAGGCCAGAGGCATTTTTGGATTAAAGAAAAACAAGGAAACCCGCTTCACAAAGGTGTCTCTGAAGATTGAAGAGACGGAAATAGAGCATGCTCTGAAAGACAAAGCTTTAGTTGGAAATATCTTAGCTACTGGATTGCCTTAAATTCTTTTCTACTAATACCCCACCCGAAAGTATCCAGCTGGCATTTAGAGACCGATGGAGTCTTCATTTTAGTACTTTATACACTCAGGTCTGAAAGCAAGTGACCTTTTTTTTACTTAAACCTGATAAAAAATAATCTATAGATTCGTGACTATTAGCACAGAATTATATCTTTGAGTTTTATTATATTTATGAATTACAAACTACCAAGGAAACCCTTTTTAATTACACTCATCGCCTCTACCCTGAGTGTGCCCCTAACCAACATGCTTACAGGTATACAGATGGGTGCTGCAGAAAGTTCATATATTGATTTCTTAGTCTCCTCAAACATTGGTATATTTTCAAGAACGTTTGGATCAGAGGAAGCAGAACGAAAAAGGAGACTCCAGACAAATAAGCCAGCTGACGTGGAGATTGGAGGACACTTTGATCAAAGGATATCTTTTTTTTGGAGTGTGCTGTGTTCGTGTTATGTTGCAGAGACTTCCGCACTGCGACATTTTAAAGACTCGTTGAATTTCCTGGGCACTCCCAAGGTTGTGGGGGTGGTCAGGAGAATGTGACTACAGATTGTGAATATATTTATTTTCAAGTTGCAGTCTTTGTTTTCTTCAGCTATCACATTTCAAGAGAGCTCAAACTTTTCAGAAGGCAATGTGAAAATTCCTCCCCAAACTGTCCCACGGTCCTCAGCTGAAGCCACTTACTTGTTTCAAGATGCCCTCGTTTGGGTTTGGATTGTCATTGGAACCTCATTTTCCCAGTCTCTAGATAAATTAATCCACATAGTTACTCAAGTCCACGCTTTTCTGGGTTTGGCTTCCAGTGGCATTAAATGGCAATTTGTGATGGGGACACCAGAGGGCACCATGATAACACTGACTGCCTTAGGAGTGCAGGTGTGGGACTGGGGTAGTTGAGGGAAGGGGAAAAAAAAACTGAAGTTTGATTCCTCTGGGAGACTGCTGTACTTTTATAACTCAAGCATATGCTTGGAATGCAAACCGTGTGTGATAGGAATGGTCTGACAGCCAGTGACCAAGTCTGTGCTGCTCCCTGAGTTCTGCCTCCTGCCTTCCTGACATGGCTTGGGTTTGAGAATTTGATACGTGTACAAATGATCAGTTGGCCACTGTTTCATTCATGCTGCCCACTGTCTCCTTGCAATGTGATCTGGGCTGCGGCAGGTGGTACAGGATAGAAGGAGGGCACAGAGAGAGCCCTCTGAAATGAACACTACCTGCTGGTGTGTGTAGCAGAGCGTGGTCTGTAGACAGGAGTCTGAATGTCTCACACTCTCCTTCACTAGAGCATTTGTTCCCTCTGCGGTCAGTTTGCGGGGGGAGAACACAGGTCTATACCTCGCAGCTTGGAAAGTGTCCGGGGCTATAAGGGTTAATGAGCATAATTGCAGAGATTGTCCGAAGGCTGATGGAAAGCAGAGACTGAATGGGATTGAGAACAGATGCGAGGCTTGATTTAAATTACGCTTTATTGGATGCTGCAGCCTTAAGAGACGTGACTGCTTTACAGTCTGTTTCCACACTGTGGGCAGCTGCTGTCTGTTCTGTGTCCACAGTAGGATCCTGCCCAAAGAGGAGCGACCTGCCCACCTCGCTGTGTTTGAGGCTTGGCGCCTTCCTCTTAACTGTAGGGCTGGAGTCAGGAACATGGCTTGACTCGCATTGGGGCTGCTGTGTATCCTCTATGGCACTGAGCCAAGGTCGCATTTGCAGATTCAAAGAGGCCAAATTTCTTCCCCCATCTACCTCCTCTCTCTCCCTTTCCCCTGGAATTAGGAAATCGGGTTTTCTGTGTACTGGTTAGTTTTCCTTCCCTTCGGTTCTCCCCCCACTGTCAATTTCTAGGTCATTGCTGCTCTTAAGACTTCAGCAATTGGAACAGGGTTGGTTCCGTCAACGATGCGTGAAGCTGACTTCGAGTCCCTGCTTGGCTTCCGCTGCCCTTATGGGAGCACAGGCTGATGTATGTTTGACAGCGGAGTCTTAAATGTAATTCAGACAGCCGGGGAGCAGACTGAGAGCAGGAAGAAAGTCCTTTTCTCGCTGAAGCTGAGAGCTCTGGGAAGGCGGTGGGATTTTTAGGAGGCTGGGCTGGGCTTGTGGTTACTGGTTTCTGCCAGGAGCATAGGCCGCTTCACATGGAGTAGTGGCAGAGATGCTGACCTACATTCTTCCTCTCGAAGGTGGTGGGGTGTGTGTGTCTGTCTCCTGGTTTATTTATTTCTTCACAGAGGCAGAGGAAGCTGCCATAGAGTGTCGGTGGGTATTGCCATGGAACACACTCAGACACAATAAAACTGGTTTGAGTTTCAACCCCGGAGCTGCAACTGACAATTCTGGCTCAGTGAAGACCTGCCTGTGTCTGGATGACTGGCAAGAGGGTGTGAGGTCCAAGCTGCCCAGAGATCCAAAGTTGGCAGAGCTCTCTCCTTCTTCCCCCTCATTGCGCCCTTTTAAGATACACCAATAAAAACTGAGAAGTAGGAAGGAGATGCGACTTGGGGCTTTTTAAAAATATCTGTGGAGAGGTTACCTTGACTACTGAGAGAGAGGCCAAAACAGAGCCGAGGTGGAGAGCTTTTTTAACATTTGTATCTGTCCCCAGCACCTAGTTCAGTGCCTGAGACCTGCGGGGGCCAGGGGCGTATTCCATTAACAGTTGTTGAGCGAACTGATCCATGATGGAGTAAGACGCCGCCTCCCCTTCATCTTGAGGACAGTTCTGATCTGGAGGCAGCCCGGGCTGATGCTTCTGCACGGAGGTGGAGCAGGGAGAGGGGGCGCTCCATCCTGCGGCATGTGTCATGAGGCTTCTCAGCCTCACAGATGCGTCCCAATGGCTCCCTCTGATGTGATATTTTGCTTGAGGCAACTTCCATGTTGCTCCCAGGAGCCCCTGGCTTTGAGGGAAAGAGTCCCACCCACTGGCTGGGAGGAGGGGGTGTCTGTCTGGATGTTACCTAGTGTCCCCAGAGATGGGCCAGAAGCTGCGTGGCCTCTAGTTGGCAAGGGATTAGGGAGGAGCCCACCTTTGGAGTCCTGCTGTTTTAACTTTTGAGGAAAAGGTGTGATCTCAGGTTCCTCCTGAAAAGATCAGGTGCCCTCGGAGACCTTTTAAGTTACGCACAGCAGTAGGTCTCCACCTTCTCAGAAGGGGTGGGTCTGCAGGGGGAGAAGCTGTGCCCTTTGGCCTCCCCTTGGTTTTCAACCCCGGCCCCAGGGTGCTGGCAGTAGAAGCTAATTGGGTGCGAGGGGCCTGGGTAAAGGCTGTCTGAAGCCTGGCAAAAGGAGGGAGCCAGCTCCTTTTTTAAAAAGCTCTAATTGAGTTCTGAATCAGCCTCGCTGCCTTTGATCCCGCCTCTGTTTCCCACACTGCCTGAAAGAGCTTCATCAGCACTTTACAACAAGGGT EMBV3_19709 CTAAGACTAAGCAGGCCTACAGTGGGAGAAGGAAAGGGTGCGATGAATGGAGAAAGTAGC Gene GeneID:614187|C12H13orf30:NM_001076315:199_cdna Constitutive 0 NULL GeneID:614187 12 GENE C12H13orf30 C13orf30 chromosome 13 open reading frame 30 ortholog EMBV3_00518 AGACTCCCACCGGCGCCCCAAACTAGTCAAACTCGGCGCCCCCCGGGCCGCAACGCGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17957 GTTCCAATTTCAACTCGGCTCTGGTTGCGCAGGCCGGCTTATCATCTGGACTTCAAGCTG Gene GeneID:525806|LOC525806:XM_002691797:429_cdna Constitutive 0 NULL GeneID:525806 12 GENE LOC525806 NULL similar to KIAA2032 protein EMBV3_35079 TTGATCGCTTAGATGGAGTTCGTTTGTTGTGGTCCCTGCTAAAAAACCCTCACCCGGACG Gene GeneID:526515|ARMC4:XM_002692147:140_cdna Constitutive 0 NULL GeneID:526515 13 GENE ARMC4 NULL armadillo repeat containing 4 EMBV3_10268 GACCGGTGCAGCAGCGGCAGCTCGAGCAGCGCTTCCCTCCCGACACCCCCTGAAAAGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23100 GGACTCCTCACTGCAGACATGCTGAAACAGCTGGAAAGAGAGTGGATGACACAAAAAACC Gene GeneID:505988|SUPV3L1:NM_001101862:284_cdna UTR3_Alt 2 NULL GeneID:505988 28 GENE SUPV3L1 MGC151854 suppressor of var1, 3-like 1 (S. cerevisiae) EMBV3_32572 TATCGATGAGGAGCCTGACTGGTTTGAGAAGCAGTTCTCTCCTTTGCATCCGCCTCCTCT Gene GeneID:782214|IL17RD:XM_002697001:387_cdna Constitutive 0 NULL GeneID:782214 22 GENE IL17RD NULL interleukin 17 receptor D EMBV3_24413 AACAGGTAGCCCATCTGTCCTCCACAAAATGGTGTGGTTCTGCCACTGGTACCAAAGCTA Gene GeneID:618018|STRA13:NM_001114527:144_cdna Constitutive 0 NULL GeneID:618018 19 GENE STRA13 BHLHB2 MGC137017 stimulated by retinoic acid 13 homolog (mouse) EMBV3_19052 GGCTATGAAAAGTTCTCATATGTGAGCTTAGATATGAGCTGCTGTCTAGAAGTGGTGCTA Gene BVV0102_114378 + 0 NULL GK000014.2:56314331-56652420 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28953 ACTTGATTCTGACTGTGTGTAATCCCTGCCCCTTCCATAACCTGTGGAGGTTCTCTTCCC Gene GeneID:281799|GPR68:NM_174329:127_cdna Constitutive 0 NULL GeneID:281799 21 GENE GPR68 NULL G protein-coupled receptor 68 EMBV3_05669 CAGGTGTGGCATTGCTCTGGATGCATGGATGTTTCCCGTGGGTGATGAAGTATATTCCAG Gene GeneID:282311|PLA2G7:NM_174578:213_cdna Constitutive 2 NULL GeneID:282311 23 GENE PLA2G7 NULL phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) EMBV3_08598 GCATGGGGAAACTAAAAAACCTTGCAACTCGATTGCTGTTCGTTCATCCTCAGCATTATG Gene BVV0101_013001 + 0 NULL GK000006.2:12803722-12965128 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15631 GGATGCGACTAAAATCAGCACCGTGCGCGTGCAGGGCAACGACATCTCGCACCGGCTGCG Gene GeneID:790185|VSTM2B:XM_002694719:17_cdna Constitutive 0 NULL GeneID:790185 18 GENE VSTM2B NULL V-set and transmembrane domain containing 2B EMBV3_32379 TGTCCTGCCTTGCATCCAGCAAATCCAGAGGTAAAGATCCAGGGCCAGAACAAGGAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32306 AATCCCAACCAGAACAAAAACGTGGCGCTGCTCTCCCAGCTGTACCACTCACCAGCTAGA Gene GeneID:617316|ELAVL1:NM_001076454:105_cdna UTR3_Alt 2 NULL GeneID:617316 7 GENE ELAVL1 NULL ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) EMBV3_00262 TGAGGGCCCTCTTTGGGGAGCACCAAAGACCTCCCTTAGGGATTCTGGGGAAATGAAAAA Gene GeneID:541153|DTNA:XM_002697679:174_cdna Constitutive 2 NULL GeneID:541153 24 GENE DTNA NULL dystrobrevin, alpha EMBV3_22490 GGAACAGCTGCAGGGTCCTCAAGAGATGGAACGAATACGAATGGACAGCATTGGATCAAC Gene GeneID:614509|MXI1:NM_001076331:75_cdna UTR3_Alt 2 NULL GeneID:614509 26 GENE MXI1 MGC140538 MAX interactor 1 EMBV3_21404 CGCGAGCTTTTTGGCCCCTGAAGGAACACCTGAATACCTGAACCAATCTTGAAAAATATG Gene BVT0102_033871 + 0 NULL GK000030.2:38633978-38644390 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26127 AGCTGGGGGCTAGGAGGTTGGGGGTATAGTGTCTCCACAGGGTTTCTTAGAGGACTACTA Gene GeneID:521261|PCMTD1:NM_001081526:32_cdna UTR3_Alt 3 NULL GeneID:521261 14 GENE PCMTD1 MGC143031 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 EMBV3_33149 AAACTAGCATGATCTGAGCAGCATCCAGCCTGACCTCCAGGAAGCACAGCCACAAACAGA Gene GeneID:281511|SYT1:NM_174192:2_cdna Constitutive 0 NULL GeneID:281511 5 GENE SYT1 NULL synaptotagmin I EMBV3_15574 GTGTCACTGCAGCGTCTCCTCAAACAGAGCAGGATGAAATTAAGTTGTGGGAGCTGATGA Gene BVV0102_255392 + 0 NULL GK000004.2:77413144-77431853 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184614 TCONS_00184617 TCONS_00184613 TCONS_00184615 TCONS_00184616 1 XLOC_111388 Coding TCONS_00184616 XLOC_111388 Coding Coding ZMIZ2 4:77430060-77448101 j TSS137435 5663 1 TCONS_00184616_5 934 0.0995938548472541 20 0.68719512195122 0.000534114699655426 0.000329710289098321 9.93980929265335e-08 8.42301257856855e-05 0.000267590020749631 1.01532392868068e-05 0.000105760030926775 2.36063301009625e-08 0.000355858216248294 0.000452897038471212 2.71664101181232e-10 5.2220408351563e-05 4.46182376462754e-10 1.01651418066675e-09 0.000284879920716048 1.23360027499129e-08 1.87520188674125e-16 1.21744931844535e-11 1.09440409132737e-10 0.000451121389171518 1.81006160208141e-05 5.18456149043108e-13 1.99954223877558e-16 7.07142258969415e-05 0.000198496497327708 0.000194751393082917 0.000729168253390159 0.000109091697855774 2.06165606434411e-10 0.000251450787004072 XM_005205600.1 ZMIZ2 PREDICTED: Bos taurus zinc finger, MIZ-type containing 2 (ZMIZ2), 0.0 6819 100.00 0.667490729295426 NM_031449.3 ZMIZ2 Homo sapiens zinc finger, MIZ-type containing 2 (ZMIZ2), transcript 0.0 3285 82.34 0.569132968391312 TCONS_00184616_5 sp|Q8NF64|ZMIZ2_HUMAN ZMIZ2_HUMAN Zinc finger MIZ domain-containing protein 2; 0.0 1543 87.07 0.998929336188437 1 coding 1 0 1 1 -1.01366275257386 0.106525712813784 0.0107406835474162 0.858522698006149 CCTCTTTCAGGCCCCGCCTCCTCTGCTCCGCCCCGGCAGAGAGCGGAGAGCAAGCGCTGGTGACTCCGCAGACGCTGCGCCTGGAAAGCCAGAGCAGCCAAGTCTCACGTGAGCACCGGTGAGGGCCGCTTCCTGCCTCCCGCAGACCTGGCCTTCAGGCTGTTCCCAAGCCAATGAACCCCATGAACCCCATGAAACCTGCCCTGCCCCCCGCACCACACAGTGATGGTCCATTCGCATATGAGGCGGTGCCTTGGCAACAGAGTGCCACTCAGCCAGCAGGATCACTGTCTGTGGTCACAACCGTGTGGGGAGTTGGCAACGCAGCACAGAGCCAGGTTTTGGGGAACCCCATGGGCCCTGCAGGGAGCCCCCCCGGCAGCTCCGTGATGCCCGGCATGGCAGGCGGCAGCTCCGCCCTGAGCTCCCCACAGTGCCTCGGACAGCAGGCATTCGGTGAGGGTGGTGCCAACAAGGGCTACGTGCCACAAGGGGTGTATGGCCGCGGGGTCTACCCCGGGGGCCCTGGCTTCACTACCGGGTATGCAGGTGGCCCAGGGGGTCCGGGGGGCCTGGGCCTCCCCTCACACGCCACACGGCCATCCACCGACTTCACTCAAGCAGCGGCGGCTGCTGCAGTGGCTGCTGCCGCCGCCACGGCCACCGCCACAGCCACGGCCACCGTGGCCGCCCTCCAGGAGAAGCAGAGTCAGGAGCTGAGCCAGTACGGAGCGATGGGGGCTGGACAGTCTTTTAACAGCCAGTTCTTGCAGCACGGTGGTCCCCGAGGGCCCAGCGTGCCCAGCAGCATGAACCCAGCCAGCGTGGGAGGGCTGATGGGCCCCTCCAGCATGAGCTCCATGGGCATGAACTCCACCCGGGCAGTGGGCATGGCGCCCCTCTATGCAGGGCAGCGCCTGCCCCAGCAAGGGTACCCGGGCCCCCCCCAGGCCCAGCCGCTGCCCCGACAGGGTGTCAAGAGAGCCTACTCGGGCGAGGTGTACCCTGGGCAGCAGTACCTGCCAGGAGGCCAGTATACGCCTGGTGCCACCCAGTACGTACCTGGCCCTGGGCAGCCCCCTGCCCCATCCTCCTACCCCGGGCACAGGCTGCCCCTGCAGCAGGGCGCGAGCCCATCCCTGTCCACCGCCAGCCCTGCGGGACCACACTACAAGCCTGCAGAACAGTTCAACGGGCAGGGTGCCAGCTTCAACGGGGGCAGCATCAGCTACAGCCAGCCTGGCCTGAATGGGCCTGCTCGTTCCATCCCTGGCTACCCCAGCTCCCCACTGCCTGGGAGCCCCACACCACCCATGACCCCCGGCAGCACCATCCCCTACATGTCTACCAGCCAGGAGGTCAAGTCTCCCTTCCTGCCTGACCTCAAGCCCAGTGTGAGCAACTTACATCCATCGCCACCTGGCAGCGGCCCCTGTGACGAGCTGCGGCTGACCTTCCCTGTGCGGGATGGGGTTGTCCTGGAGCCCTTCCGCCTGCAGCACAATCTGGCAGTGAGCAACCATGCCTTCCAGCTCCGAGACTCCGTCTACAAGACCCTGATGCTGAGGCCTGACTTGGAGCTGCAGTTCAAGTGCTACCACCACGAGGACCGGCAGATGAACACCAACTGGCCAGCCTCTGTGCAGGTCAGCGTCAACGCCACCCCGCTCACCATCGAGCGCGGCGACAACAAGACCTCCCACAAGCCCCTTTACCTGAAGCACGTGTGCCAGCCGGGCCGCAACACCATCCAGATCACTGTCACCGCCTGCTGCTGCTCCCACCTCTTCGTGCTGCAGCTGGTGCATCGGCCGTCCGTCCGCTCAGTGCTGCAGGGCCTACTCAAGAAGCGCCTCCTGCCCGCGGAGCACTGCATCACCAAGATAAAGCGGAATTTCAGCAGCGGAACCATCCCTGGCACCCCAGGGCCCAACGGAGAGGATGGGGTGGAGCAGACAGCCATCAAGGTGGCCCTCAAGTGCCCCATCACCTTCCGCAGGATCCAGCTCCCTGCCCGGGGCCACGACTGTCGCCACATACAGTGCTTTGACCTGGAGTCCTATTTACAGCTTAACTGTGAGCGAGGGACCTGGAGGTGCCCCGTGTGCAACAAGACGGCGTTGCTGGAGGGCCTGGAGGTGGACCAGTACATGCTGGGCATTCTCATTTACATTCAGAACTCTGACTTCGAGGAGATCACCATCGACCCCACGTGCAGCTGGAAGCCAGTGCCGGTGAAGCCTGACTTACACGTCAAGGAAGAGCCAGATGGGCCAGTGCTGAAGCGCTGCCGCACTGTGAGCCCTGCCCACATGCTCATGCCCAGCGTGATGGAGATGATCGCTGCCCTGGGCCCGGGTGCCACGCCCTTCACCCCCCTGCAACCCCCCTCAGCCCCGGCCCCTGGCGACTACCCTGGCCAGGGTTCCAGCTTCTTGGGACCTGGGACCTTCCCCGAATCCTTCCCACCCACCACACCCAGCACCCCAACCCTGACTGAGTTCACCCCAGGGCCTCCGCCTGTCTCCTATCAACCCGACATCCCCAGCAACCTCCTGACGCCAGAGAAGTCCGGCCCCTGCCTCCCAGGCCAGATGGCACCAGCAGGTCACCTGGACCCAGCCCATAACCCCGGGCCCCCAGGGCTGCATGCCCCTAACCTTGGAGGCCCCCCAGGGCCCCAGCTGCATCATCCAAACCCTCCCCCAGCATCCCGGCCAGCTCTGGGCCCAGTGAACTCGGGGCCTCTCAGCGAGCTGGCCTTCAGTGCTGCCACAGGCATGATGGGGCCCCCCGTGTCTGGGGCAGGGGAGGCCCCGGAACCGGCTCTGGAGGTGGTGTGCGAGCCAGAACCAGTGCATAAAAGACAGCTGCTTCCAGAACTGACTAACCCTGATGAGCTGCTGTCCTACCTGGGCCCACCTGACCTCCCCACGAACAGCAACGATGACCTGCTTTCTCTCTTCGAGAACAACTGACCCTATCCGTCGACCACCTGGCTGGCAGAGACATGCCCACCAATGTCTCGCACCCTTCTTTCCAGCCCAGCCCCACCTGACACCAGCGGCCCTCCCCACGTGTACACCTGGAGCTGGGACCCGCCCCTGACACCTGGCTGCTGGAGGCCGCACTGCACTGGCTGGGAGCGGAGCCCTGGGGCAGGGTTCTCACTGGCCCAGTTTGCAGCTGCAGAACTGTTTTTGAGGAGATGCCCAGCCCTGCCCCCATCTGTACCAGCCCATGCTTGTCCAGCCCTGCCTGGTTCATGCATACCCACCACCCCTGAACTCCAGCCTCACCCAGGCCCCCCACCCCACTTGCTCCCACCAGCCTGCATCTTGTCCAGCGTTGACCTTTCTGTTTCAATGACCCGTTTGGCCCTAGGCCAGCAAGGAGGGGGTTACTCTGTCCTGGGGCCTAGTCTCGCCCAACCTGCTATGGCAGGGGCTTCAGGCTGAGGCTGGGGGTGGGGGGCTCTAAAGCACAATAGTGTACATAGTGTAGAAACACTAATAGATGTAGGGTGGCTTGTCCCTCTGTGCAGCGTGGGTCTCCATGGGCTCCTGCCCTCACCCATGTGCAGGCTGGGAGGGGTGGGGGGCAGCAGGCTCCCTCCTACTGGCGGTCGGGCTCAGACTCAGCTCCATGTGCAGATTCTCCAGCAGCCTGTTCCCCCCAAGTTGCCCTTTTCTGTACGAGTGAAGAATTGGTCCCACAGTGTTTTTTAAATCCACCTGTCCTCCCACGTCCACCCTGGGGCCACGCCAGGTGGGGGAGGAGGGGCCACCACACTCTAGGTGCAGGGCCAAGTCGTGTCCCCTGTCTGCCTGTCTCTATTAAAGGACTCCCTCGTGGTGGGCCTGCCAAGTCCCTCCTTCCTGCTCAACCTGCTTACCACACATGGGCGGGGCTCCCTGCTTAAGGCAAGGCCCAGCTATTTGCAACCCGAGGTAAATTTCCTTGTCCCTGGAATTTTCCAAGTTGGCTCTGGCTAGAGAGCTATTTATGAAGTGTCACCAGGGCTGGGAGACACATCTGCCACCACGTCACCGTGTGGGCTTGCCTCAGGCGTGGAGCAGCTGTGGGGCCAAGGAGCAGGGTCTGAGTGCCTGACCAGCTGGACACTGGTTCATCTGTGTGCTCACTGCCCAAGTGGCCCCATGGGCCTTCCAGTCCAGCAGAAAAGGCTTATGAGCCCTGTCAGGGAGAGGGGGTAGCACACCCAGAGACCGGCCCCAATGGACGAGGGGCAGTGTCCAGGACGGGGGAGCTCCAAGTTGCCCACTGACATCATGAAACCCCAGGTGTGCGCCTTCCTATCCCTCTGCAGCCATGTTCCTGCCCAAGGGTACAAAAGGAGAGAAAGGCTTAGGGAGGAACAGTGCCCCCAGGGTTTGCCCAGAAGCCCACCCTAAGGACAGGTAGGCAGCGGGATCAGGGACAGGCCCAGCAGAGCCCACCCCTAGGGGTGGGGGGGGGCGTGCTCCCCTACCTGTTCTGGGGGACATTAGGCATAGTTGGGAATGTTGTCCCACCTTGTGGTCTCACCGGGCCTCTGCACCGTCAGCCTGTAACATTCTGGATGTTGGGTGGAGTGGAGAGACCAGGAGGTGGGGATGAGCCAAGATGCTTCTAGCTACTCAAACTCCACCTAGGGCGGGGGGTGGCAGTGGAGGATCTGAGGGGCAAGTGCACACCATCAGGGCCGAGCTCCGGTGTCACTGCAGCGTCTCCTCAAACAGAGCAGGATGAAATTAAGTTGTGGGAGCTGATGAAATGTGATGGCGTTCTACAAAACATGACACCAAATATATACATTTCATGGATTCACACAGATGAGGCAGTGATGAAGGGAAGCAAGATGGTCGACGTGTTGGCCACAGTGCTCCCTGTCGGAACAGCATGGGTGTGTCCAGGGAGGGTGGTAGTATCAATGGGGTCCTGATCCTCAAGGGGAGTGGCGGTTGCATGAGTTTCACATGCTTCATGTATTGTATATCCCAGTAAGTCCTTGATGGCTCAGCAGGTGAAGAATGTGCCTAGTGTTGAAGACAGGAGATGTAGGTTTCTGTTCCTAGGTCAGGAAGATCCCCTGCCTGGAGAATCCCACAGACAGGAGCTTGGAGGGCTACAGTCCAAAGGGTCACAGAGTTGGACACAAATGAGCGACTAAGCACAATGTACATACCAAATACACATCTTAAAAAAAAAAAAAAAAAGCCAACTAGGCCTAACAGAACGGTTCACCCAACAGAAGCGGAGTACCTGTTATTTTTAAGTGCATGTGGAACATTCTCCAGGAGAGACCACGTGTTAGACTGTAAAACAAGTCTCAATAAAAAAAAGGTTGAAATCATACAAAGAATGTAGTCTGACCACAGTGAAATGTAGGTAACAGAACAGAAGACTGTTATCTGCTGGAAAACTCAAATATGTGGAAATGGACACTTCAAAAACTGAAGGATCAAAGGAGAAACCACAAATGAACTACAGGATAAAACACTACACAAATTGGTTTTTGTAAGCAAATTTTGTTTTTTGGCTGTGCTGGGTCCTTGTTGCAGCACAGGCTTTCCTCTAGTTGCGGCAAGAGGGGTCTATTCCTTGTTGCAGTGTGCAGGCTTTTTATCGTGGCTTCTCATTTTGTGGAGCACGGGCTCTAC EMBV3_09961 CTTCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAACCTTCAGGATGG Gene GeneID:541127|NFATC3:XM_002694826:712_cdna Constitutive 0 NULL GeneID:541127 18 GENE NFATC3 NFATx nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 EMBV3_33877 GAAGCCCTGAGAAACTTCGAGGATCTCTGATTCACTTATTTGGACACATCTGGCTGAGGG Gene BVV0102_318016 + 1 EMBV3_38842 GK000026.2:28630478-29338555 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24898 CTCTGAACAATCCGGAGAATCAAAGAAAAGTCAGGACCGGCGAAGAGAAAAGTCTCCAAC Gene GeneID:781016|CWC22:XM_002685271:92_cdna UTR3_Alt 2 NULL GeneID:781016 2 GENE CWC22 NULL CWC22 spliceosome-associated protein homolog (S. cerevisiae) EMBV3_05106 GTTCAACCAGGCCAGCCTCTTCCTGTTTCCTGTTTGTTGATTAGGACCCAGAGTTGCAGC Gene GeneID:539308|SMO:XM_002686937:54_cdna Constitutive 0 NULL GeneID:539308 4 GENE SMO NULL smoothened homolog (Drosophila) EMBV3_19120 AGTGAGGAGGCCTGAGGGTTCAAAAGACTAGCCTTCCATCCTAGGCAACTGTGGAGAGGT Gene BVV0102_052129 + 0 NULL GK000030.2:86413226-86604024 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09324 ACAACGAAAAGCCTTCCTCAGTGTCATCGCTCAATATCTCGAGGCACACACCCCATCGAG Gene GeneID:617184|KCNK4:XM_002699381:339_cdna Constitutive 0 NULL GeneID:617184 29 GENE KCNK4 NULL potassium channel, subfamily K, member 4 EMBV3_23462 CCCTCTGCGCTCCTGCTTCTGCCTCCCCATCTTTATCACCAGGAAGAACCGCCAGGTGTG Variant GeneID:327712|CCL5:NM_175827:191_cdna 131^242 1 EMBV3_38448 GeneID:327712 19 GENE CCL5 MGC127014 RANTES chemokine (C-C motif) ligand 5 EMBV3_18018 ACACGAGCTCTATTCTTTGTATTTTGCCTAGGGAATTAGCAATGTCCTGGTTCAGATGGC Gene BVV0102_362434 + 0 NULL GK000007.2:3514226-3534585 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241380 TCONS_00052465 TCONS_00240353 3 XLOC_148044 XLOC_031472 XLOC_147017 NonCoding TCONS_00240353 XLOC_147017 NonCoding NonCoding - 9:44686462-44687167 - TSS180031 705 1 TCONS_00240353_1 48 0.260992907801418 1 0 3.43993194123117e-05 9.90044706300851e-06 1.75606410269832e-05 7.00120284796819e-05 6.30954746320674e-05 9.20670572514371e-05 1.6400905950527e-05 2.96203523126883e-05 0.000123497225707236 0.00146380204991478 0.000312405547685606 0.000650286602896945 0.00042207795447524 0.000792024755913193 0.00111912044111737 0.000632165868343477 0.000304793405972807 0.0023999580279857 1.8493701477614e-06 8.15462680708717e-05 5.35587324644337e-06 0.000904257901889773 0.00202539886518054 0.00159092951597098 1.04418552244237e-05 0.000115450821780707 1.75492114691387e-05 0.000507407374777412 0.000725452570537894 0.0015974980281715 XM_005199987.1 LOC787624 PREDICTED: Bos taurus uncharacterized LOC787624-like (LOC787624), 1e-55 221 83.33 0.30354609929078 0 noncoding 0 0 1 1 -0.136100451165874 0.299299378054393 0.0352489394230892 0.578878670718135 GAGAGAGCAGACAAGCCACAGGCAGGCACACAGACAGACACACAGACACTCGCACGCACCCACGCCAGGGGAGACATCTGGCCTGCGCAAGCTCCTCAGCCAGAGCTAGAGCGCCTGGGAGAGGCGGGGGCAAGACGAACGGGCCGGCGGCTGGCTGTCAGGAGATACAGAGGCAGAAATACATGAAGATTCCGAGACAGACTCCAAGACGGCAAGAGGAGATACACACACACACACACACACGCACACACACACACACTTGAGTGTGGTCTTTGGAAATACTTGTGTTCGTAGTTGCTGGCTTGAGCCCAACTTTAATATAACCCATGGACTGCGGCCCATCAGGCTCCTCTGTCCGTGGCATTTCCCAGGCGAGGATACTGGGAGTGGGTTACCATTTCCTTCTCCGGCGGGATCTTCCCGACCCAGGGATCAAACTCCAGTCTCCTGTGCGCGGATGCCTTGCCATCTGAACCAGGACATTGCTAATTCCCTAGGCAAAATACAAAGAATAGAGCTCGTGTTCTACTAAATGGAAAGATGATTTCAAAAACAGAAGCTGTCCTTTGTTGGTATCTGTGAATCTTTATGTAGTTTTCGTTGATTTTTACTGTTAAGGCTAAGTGAACAAGGCAAGAGAGAAACCCCAGAATTGAAAAGCAATTGACGGTTTTGAAAGAAACATGTGCAGGTGAAGCTCTCTTC TCONS_00237305 . 5' 228010 TCONS_00237305 . 5' 228010 EMBV3_20751 CACCTGAAAGGGAACCGTGCTGTGAGACGTGCCCCTAATGCTGGTGTCATTGAGGGATTG Gene GeneID:510704|ARHGAP10:NM_001076830:4_cdna Constitutive 0 NULL GeneID:510704 17 GENE ARHGAP10 MGC143451 Rho GTPase activating protein 10 EMBV3_21180 CTCTCACCTCTGACTCCCATCTTCTCCCAACACCCTCTGCTGATACATAGATCTGTTCAC Gene GeneID:281069|CHAD:NM_174019:20_cdna Constitutive 0 NULL GeneID:281069 19 GENE CHAD NULL chondroadherin EMBV3_01551 ATACGTGCGACAGCGACTGTGAGAAGAATCACTCCTCCCTGATGAATATGGATGATGGGG Gene GeneID:785168|LOC785168:XM_002687832:150_cdna Constitutive 0 NULL GeneID:785168 5 GENE LOC785168 NULL hypothetical LOC785168 EMBV3_30643 ATTGAGGAACAGCTCCGGAGGGCCGCATACCTCAACATGACCCAGGACCCCAACCATCCT Gene GeneID:530880|CHD5:XM_002694171:604_cdna Constitutive 0 NULL GeneID:530880 16 GENE CHD5 NULL chromodomain helicase DNA binding protein 5 EMBV3_34451 TGGACAGGATGTGTGAAGATCTATGGCGCTGGCAGAAGCAGAATCCTTCAGGCTTTGGCA Gene GeneID:523154|GALE:XM_002685712:403_cdna Constitutive 2 NULL GeneID:523154 2 GENE GALE NULL UDP-galactose-4-epimerase EMBV3_22739 CCTGTTTCTCAAGCCTCAGATCCCTGATTACATGGCAACAGTATATCTAGCCGAGGGACG Gene BVT0102_008074 + 1 EMBV3_20799 GK000018.2:15499378-15539799 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27154 ACTGTGCAGGATGCTGGGTGGGAATAGGAAATGGAGACTTGCTCCTGCTCTGGGGAGTCA Gene BVV0102_284711 + 0 NULL GK000008.2:23054574-23073253 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01887 CCAGTTCCATACTAGCCTGTAAGACTGTGCTGGGGTTGTGCTTTATTACTGTTTGCCAGG Gene GeneID:100126230|LOC100126230:NM_001110098:2_cdna Constitutive 0 NULL GeneID:100126230 29 GENE LOC100126230 NULL JY-1 EMBV3_21277 GAGATCCAAGCAAAGTTTCAGCCCCCAAAGAAGAGGTCTGGCTCTCCCGAAGTTCAAGGG Gene GeneID:100336979|LOC100336979:XM_002699403:430_cdna Constitutive 0 NULL GeneID:100336979 29 GENE LOC100336979 NULL choline kinase alpha-like EMBV3_11400 CCACATCTGAAGCCCCCCAGGACGTGACCTACGCCCAAGTAAACCACTCAACCGTCAGAA Gene GeneID:510212|LOC510212:XM_002695437:7_cdna Constitutive 0 NULL GeneID:510212 18 GENE LOC510212 NULL similar to Leukocyte immunoglobulin-like receptor subfamily B member 3 precursor (Leukocyte immunoglobulin-like receptor 3) (LIR-3) (Immunoglobulin-like transcript 5) (ILT-5) (Monocyte inhibitory receptor HL9) (CD85a antigen) EMBV3_20555 AGATACATTTACGCTCCTGTCATATGCCTCCTATTGCCTTGAGCACGGCGACCTGGAGCT Gene GeneID:508853|IMMT:NM_001046015:62_cdna Constitutive 2 NULL GeneID:508853 11 GENE IMMT MGC133830 inner membrane protein, mitochondrial (mitofilin) EMBV3_22335 ATTTTTTATAGGTCTGGGATGGCAGGGCAAAAGATTCTAATATGCTCTTACTGAGTACTG Gene GeneID:784133|RAP2B:NM_001102531:77_cdna Constitutive 0 NULL GeneID:784133 1 GENE RAP2B MGC157137 MGC159663 RAP2B, member of RAS oncogene family EMBV3_16740 AGGGGTTTTACCTGATTTCCCCCTCGGAGTTTGAGCGCTTCTCCTTGAGTGCCCGGAACA Gene GeneID:281901|LLGL1:NM_174382:427_cdna Constitutive 0 NULL GeneID:281901 19 GENE LLGL1 LLGLH lethal giant larvae homolog EMBV3_42558 TCTTGTACAGACAAAAGCAGCCTTGGAAACCTGACACTTGTAGGATCGGGGTCAGTCAGC Gene GeneID:615692|SAP18:NM_001035467:73_cdna UTR3_Alt 2 NULL GeneID:615692 12 GENE SAP18 MGC127945 Sin3A-associated protein, 18kDa EMBV3_05114 CTCTGATTGCTGTGGCCAAAACTTCCAAAGCTATGTTGAATAGTAGTGGTGAGAGTAGGC Gene BVV0102_029561 + 0 NULL GK000013.2:74757238-74797634 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251068 TCONS_00020842 TCONS_00231833 TCONS_00238584 TCONS_00251756 TCONS_00251666 TCONS_00011536 TCONS_00110459 TCONS_00089141 TCONS_00232226 TCONS_00152670 TCONS_00032435 12 XLOC_154011 XLOC_011517 XLOC_141321 XLOC_145251 XLOC_154697 XLOC_154607 XLOC_007087 XLOC_066363 XLOC_053927 XLOC_141712 XLOC_092435 XLOC_018675 Coding TCONS_00152670 XLOC_092435 Coding Coding - 26:845808-846169 - TSS113840 361 1 TCONS_00152670_1 50 0.997229916897507 1 0 0 0 0 0 0 0 0 0 0 0.000754513739029507 0 7.61919900520802e-07 0 1.44782703650174e-06 8.15432945130844e-05 0.000329230076849789 0 0 0 0 1.05115378586998e-06 0 0 5.67591838559401e-05 0 0 0 0.000319285601242705 0 0 XM_005192617.1 CYB5R2 PREDICTED: Bos taurus cytochrome b5 reductase 2 (CYB5R2), 4e-32 141 71.28 0.817174515235457 NM_001202515.1 CFLAR Homo sapiens CASP8 and FADD-like apoptosis regulator (CFLAR), 3e-46 188 72.52 0.975069252077562 TCONS_00152670_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-13 65.9 60.42 0.94 0 noncoding TATGACAAACCGAAAGCAAACATTATCGTCAATAGTGAAAAATTGAAAAGCATTTCCCCTAAAGTCAGGAACAAGACAAGTGTGCCCACTCTCACCACTACTATTCAACATAGTTTTGGAAGTTTTGGCCACAGCAATCAGAGCAGAAAAATAAATAAAATAAATCCAAATTGGAAAAGAAGAAGTAAAACTCTCACTGTTTGCAGATGACATGATCCTCTACATGGAAAACCCTAAAGACTCCACTCGAAAATTACTAGAGCTAATCAATGAATATAGTAAAGTTGCAGGATATAAAATCAACACACAGAAATCCCTTGCATTCCTATACACTAACAATGAGAAAACAGAGAAATTAAGG TCONS_00149889 TCONS_00149890 TCONS_00149891 TCONS_00149893 TCONS_00149894 TCONS_00149895 . 3' 28179 TCONS_00149889 TCONS_00149890 TCONS_00149891 TCONS_00149893 TCONS_00149894 TCONS_00149895 . 3' 28539 EMBV3_39538 AGAGAACGCAGAGCAGGCCCCACTGATGATGGTGAAGAGGAGATGGAAGAAGACACTGTT Gene GeneID:512584|SNRPA1:NM_001098948:67_cdna Constitutive 2 NULL GeneID:512584 21 GENE SNRPA1 MGC165803 small nuclear ribonucleoprotein polypeptide A' EMBV3_39516 CAGAGCACGTTTAAAGTGCTTTCAACAAAGATGTAAAAAACCTATATCCATCATCATCTC Variant GeneID:515509|SUGT1:NM_001046203:109_cdna 766^856 1 EMBV3_32154 GeneID:515509 12 GENE SUGT1 MGC137150 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) EMBV3_26121 GTGTTTTCTGTTGACTACTTCTGGATACTTTTCATGAGGTGCCTTCAGTTGGTCTGAGGG Gene BVT0102_360111 + 0 NULL GK000017.2:41237354-41249492 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10531 AGGCTTGTGTTGTTTAAATGTCACTTCTCCTGAGGTGACTGGTTTCCTTCACGCAATCAC Gene GeneID:524289|OCA2:XM_002685200:45_cdna Constitutive 0 NULL GeneID:524289 2 GENE OCA2 NULL oculocutaneous albinism II EMBV3_14300 CATCTACATGGTCGCCATCGTGTATGAGGAGCCCTTCACTGCCGAAATCTATCAGCAGAA Gene GeneID:360197|PEMT:NM_182989:454_cdna Constitutive 0 NULL GeneID:360197 19 GENE PEMT MGC128753 phosphatidylethanolamine N-methyltransferase EMBV3_29289 TTGGGGTGGCCTTTCTGAATTCTGGCAGTTTGTGGTTCCTCTTTACTGTGGAGGTTCCTC Gene BVT0102_187942 - 1 EMBV3_43794 GK000018.2:50453117-50535167 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213731 TCONS_00251170 TCONS_00253035 TCONS_00249258 4 XLOC_130524 XLOC_154113 XLOC_155976 XLOC_152201 NonCoding TCONS_00249258 XLOC_152201 NonCoding NonCoding - X:12429412-12429655 - TSS186479 243 0.995884773662551 1 0 0 0 0 0 0 0 0 0 4.63852477706841e-06 0 0 0 0 0 0 0 0 0 0 0 0 4.36253173800198e-06 0 0 0 0.00139556252966669 0 0 0 0 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 2e-26 122 72.22 0.934156378600823 0 noncoding TCATTGCACTCCAGAGAGAAAAGATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAACTATGAAACCTTGACAAGTCACTCATCCAACACCACATACACCGAGAAACCTCCACAATAAACAGGAACCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACACAGCAATCTAAGTGAGATGAAAAGTCAGAGAAATATTCAGCAGGTAAAGGAACATGATAAATGCCCACCAAA TCONS_00246270 . 5' 269904 TCONS_00246270 . 5' 269904 EMBV3_29665 ATTCCAAGAATGGGTGACTGGGGTGAAGGAGGCTGCACCTGCCTGTGACTCTCAGCTGAT Gene BVT0102_278163 + 1 EMBV3_36533 GK000011.2:100843338-100903349 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21481 GGGTTGGCCTGTGATAAAGCTTAGGATCCTACCTGCTCTATTTCACGGAAGAAAATTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17250 GCTATGTGAGGGGGAAAGTACCCTTTTGTGAGGCCTGTTAATCTAAAACAACAACTTAGG Gene GeneID:514704|LOC514704:XM_002688475:4_cdna Constitutive 0 NULL GeneID:514704 6 GENE LOC514704 NULL similar to KIAA0232 gene product EMBV3_18465 AGGGAAGAAAGATCTATGAACCTCCTCGGTATATGAGTGTCAACCAAGCAGCCCAGCAAC Gene GeneID:508904|DPH5:NM_001076821:65_cdna UTR3_Alt 3 NULL GeneID:508904 3 GENE DPH5 CGI-30 DPH5 homolog (S. cerevisiae) EMBV3_21744 CACAGTGGACACCTTCATGGGTACCTGGAAGTTAGTGGATAGCAGGAATTTCGATGACTA Gene GeneID:100299715|LOC100299715:XM_002688370:210_cdna Constitutive 0 NULL GeneID:100299715 6 GENE LOC100299715 NULL similar to fatty acid binding protein 3 EMBV3_04279 CTCACCATGCCACAGAGAAAGAGGCAGTAAGGGACTGATTAGAGGAAGTGTTATCTTCTC Gene BVT0102_189118 + 0 NULL GK000001.2:66538295-66552010 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003604 TCONS_00003608 TCONS_00003602 TCONS_00003605 TCONS_00003603 TCONS_00003607 TCONS_00003606 1 XLOC_000889 Coding TCONS_00003607 XLOC_000889 Coding Coding POLQ 1:66551147-66658823 j TSS1848 8609 1 TCONS_00003607_13 2416 29 0.920315765033666 0.000419080302788501 0.000377695914778424 0.000356659028419158 4.48664069484072e-10 1.48891063585716e-07 2.93217319375477e-08 4.12657139088576e-07 5.91189859356377e-13 0.000320358408519383 1.65876377602428e-07 0.000222886436513249 0.000106607208655411 3.90200133744885e-05 7.94237943172831e-11 1.79998353799822e-05 0.000897806665662976 0.000173310580025656 0.00251817598110776 0.000500389473863774 3.39838754689687e-05 0.00010103512266522 0.00100559099406399 0.0010237983493515 0.000283725260077778 0.00023519543421502 9.85252991826134e-05 0.000299919439845525 0.000335686117388822 0.000227032520395667 5.54717617011476e-05 XM_615375.4 POLQ PREDICTED: Bos taurus polymerase (DNA directed), theta (POLQ), 0.0 1.477e+04 100.00 0.950865373446393 NM_199420.3 POLQ Homo sapiens polymerase (DNA directed), theta (POLQ), mRNA. 0.0 9025 84.36 0.950168428388895 TCONS_00003607_13 sp|O75417|DPOLQ_HUMAN DPOLQ_HUMAN DNA polymerase theta; 0.0 3813 79.38 0.999586092715232 0 coding 0 0 0 0 0.190583841762111 0.407321327511063 0.0221676632075126 0.639036604025872 GTTTTTCCCGAGTGGGAGGACGCTGGGATTCTGTGTTTCCCTGAATGGCGGAGAAGATTTCGCGATGAATATAACGCGCTGGAGTGGGAAACAGCGACGTTCAGCATCAGACTTAAACTCCTCGTCGGGAAGCGGCTTTGACGGCAGTGACAGCCCTTTGCTCCTTTCCGGGCCGGTGCTGAGCCCACCTCCGGGCCTGGGACGCAGCTTGAAGGATCGTGGGCGCCGGCCGGCCGGAGCTACAGGGGAATGCAAGCAGACGTTTCCTGATGATCAAATAGACAAGCTGCTGTTGGCAAATTGGGGACTTCCTACAGCGGTTCTGGAGAAATATCACAGTTTTGGTGTAAAAAAGATGTTTGAATGGCAGGCAGAGTGCCTTTTGCTTGGACAAGTCCTGGAAGGAAAGAATTTAGTCTATTCAGAGTCTATTTCAGGAAGTAGGAATAAAAGTAGATGGTTACATGGGCAGTACCTCCCCAACAAGGCATTTCTCTTCTTTGGATATTGCTGTCTGCACAATTGAGAGAGCCAATGGTCTGATCAATCGCCTCATAGAGGAAAATAAGATGGATCTTTTAGGAATGGTGGTTGTGGATGAATTACATATGTTGGGAGACTCTCACCGAGGGTATCTACTGGAGCTTTTGCTGACCAAGATTTGCTATATTACTCAGAAATCAGCATCATGCCAGGCAGATTTAGCCATTCCTTTGTCTAATGCTGTGCAGATTGTTGGCATGAGTGCTACTCTTCCAAATTTGGAGCTTGTGGCTTCCTGGTTGAATGCTGAACTCTACCACACTGACTTTCGCCCTGTACCACTGCTGGAATCCATAAAAATTGGAAATTCAATTTATGACTCTTCAATGAAGCTTGTGAGGGAATTTCAACCCATGCTGCAAGTGAAGGGAGATGAGGATCATGTTGTTAGTTTATGTTATGAGACTGTTCGTGATAACCATTCAGTATTACTTTTCTGTCCATCGAAGAAATGGTGTGAGAAGCTGGCAGATATCATTGCCCGTGAGTTTTACAGTCTGCACCATCAGGCTGAGGGATTGGTAAGATCATCTGAACTTCCACCAGTGATGCTGGAACAAAAGGGCCTCCTAGAAGTGATGGATCAGTTAAAACGTTCACCTTCAGGGTTGGACTCTGTATTGCAAAAAACTGTGCCATGGGGAGTAGCATTTCATCATGCAGGTCTTACTTTTGAGGAGAGAGATATCATTGAAGGAGCCTTCCGTCAAGGTCAGATTCGAGTCTTGGCAGCAACTTCTACTCTGTCATCTGGTGTGAATTTACCTGCACGTCGTGTAATCATTCGCACTCCTATTTTCAGTGGTAGACTTCTAGATATTCTTACTTATAAGCAGATGGTTGGTCGTGCTGGCAGGAAAGGTGTAGACACAGTAGGTGAGAGTATCTTAGTTTGTAAAAACTCTGAGAAATCAAAAGGCATAACTCTACTTCAGGGATCTCTGAAACCTGTTCATAGCTGTTTGCAAAGACACGAAGGAGAAGAAGTAACCTCAAGCATGATAAGAGCTATTTTGGAGATAATAGTTGGTGGAGTGGCAAGTACGTCACAAGATATACAGACTTATGCTTCTTGCACATTTTTGGCTGCAAGTATGAAAGAAGGGAAGCAGGGGATTCAGAAAAATAAAGATTCTGTTCAACTTGGAGCAATTGAGGCCTGTGTAATGTGGCTACTAGAAAATGAATTCATCCAGATTACTGAAGCTAGTGATGGAACAGAAGGAAATGTGTATCATCCAACACACCTTGGTTCCGCAACTCTTTCTTCTTCACTGTCTCCAATTGATACTTTAGATATTTTTGCTGACCTACAAAGAGCAATGAAGGGCTTTGTTTTAGAGAATGATCTGCATATTGTTTATTTGGTTACACCTGTGTTTGAGGATTGGACTACTATTGATTGGTATCGATTTTTCTGTTTATGGGAGAAGTTGCCAGCTTCTATGAAGCGGGTGGCAGAGCTAGTAGGAGTTGAAGAAGGGTTCTTGGCTCGCTGTGTGAAAGGAAATTTAGTAGCCAGAACTGAGAGACAGCACCGACAAATGGCCATCCATAAAAGGTTTTTTACCAGTCTTGTGCTATTAGATTTAATCAGTGAAGTTCCCTTAAAGGAAATTAATCAGAAATATGGATGCAATCGTGGACAGATTCAGTCATTACAACAGTCAGCTGCTGTTTATGCAGGGATGATTACAGTGTTTTCCAACCGCCTGGGCTGGCACAACATGGAACTACTGCTTTCCCAATTCCAGAAGCGTCTTACATTTGGCATCCAAAGGGAGCTGTGTGACCTGGTCCGGGTGTCATTACTTAATGCACAGCGGGCCAGATTCCTCTATGCATCTGGTTTTCTTACTGTGTCTGATCTTGCTAGAGCAGATGTTGCTGAGGTGGAAAGTGTTCTGAAAAATGCTGCACCTTTTAAAAGTACTCGAAAGGCAGTGGATGAGGAAGAGGAAGCAGTTGAAGAGCGTCGAAATATGCGAACTATTTGGGTGACAGGCAGAAAAGGTTTAAGTGAAAGGGAAGCAGCAACCCTTATAGTAGAAGAAGCCAGAATGATTCTGCAGCAGGACTTAGTTGAAATGGGAGTGCAATGGAATCTACATTCCTTTCTAAATTCTGATACACACTTACTGACCAGCAGTGAGTCAGAAGTAAAAGAACACAAATTTATACCTCAAACTAAGAGTTCTTATAAAAGATTAACATCAAAGAAAAAAAGTGACACAATATTTAGTGATTCTGTTAATCACTTACCAGATACCATGCAAGATTTAGATAAAAGTAGAGAACATACAGATTCCTTTTATTATAAATTTCAGGATGGGAATCAAGAGTGTCATCATTCCATCTCCAGAGGGAAAAAACAGGCTTCTTTGAGTATTAAAAAAGGAAAGCTAGGAACTTCTCTGAATGAGGGGAAAGCAAGCACTTCGAAAGTTGTTCGGACTCTCTCATCACGGAAAACAAAAAGAGAAGCTTTAAATTTTAGTTCAGAAAAAGTGAGTACAATCTCTCAATCTTGGAAACATGGTAAGCATCGAAAACGATCCAGCGACAGTAGCCCTGTGAAAGACACAAAGATGCGTAGAATCAATTTACAAGAACGGACTATGTCTAATTCTATTCATTGTGAAGACTCTTTTACTTTAGATAAGATGAGTATGGAATTTAGAAGTCCAGAGCCATTTGCTAAAAATGTATCTTTCCGTGCTGAGAGAAGATGTAACATAATACCATTTGCATCACAAACAGAACAAAGTTGTTCTAGGAACAATAAAATACCTAATGATATTCTTGGGGAACACTTGATCACAGGATCTCAGAGTAAACATGTGATTCAAGCCACTAGTGTGGTCAGTGAAAATGGAAGAGAATTAGCTATTGAATCAGAAAAAAAAAATAAAGTGGTGATACAAAATGATTCAAAAATCCAGAATGTTTATGTGAAACACCATGACACCCATCCAATTAACCAGTGCCTGGAAAAGCAGTTTAATAAAGAGACAAATACTCACATCAAACTGAATACAACAGTAGCAAAACAAATACCCTATGAGACAGACAGTAGTTATTTGAATAGAGACTCAAATGTTATTATGAAATGTGAAAGTACAAAGTTTAATGTTGAGGAAAATAAATCAAGTAATCTTAAGGCATCAGGAGATATCATAAGCAGCATTGAGATACCCAGTGAAGTACATCTACCAAGTGGAGCATTTGGTAAATTAAGAGGCCAGCCTGAGAATATTCTAAATACTCCTAGAGTACAAGGAAGAACAGATGCTTATGCAGCAGACAGAACTAAAAATAATTGTGTTTCTGACTTAGGTTTAGATCTCTGTGATCTTGAAGATAGTTTCTACCTGGATACTCAGTCAGAGAAAATAATTCAGCAGATAGCAACTGCAAATGCCAACCAAGAAGGACCCAAGGATACCAGCCTGGCAACAGGGATGATTCAGAAGAACCTAGACAAACAGAGCTCAATGAGCTCCTTTCAGAAAGAGCCTCATGTTGCTTTTCCAGGCGAACAGCATTCACTAGAAATGACAAATCATTTGAAACATAAGACTGTAGATGTTGTGAAGCAAAGCACTGATTCACATGAGGTTGATACCCTGACTCCAGAAAGGCCAATTTTTTATTCTCCAGTACTAGTAGGGGAAAATGGCCCATGTTTTAAAGGCAGTGAACTTTCTGTTACTGACTCCCAATTAAATAGTTTTCTTCAAGGTTATCAAACACAAGAAACTATGAAGCCAGTTATACCTGTGATTCCTCAAAAGAGAATTCCTACTGATACAGAAGTAGAGTGTCTGCCAGTTCCTGAAACAAGTTTGAATTTGAGTGGTAGTTTACTGTTTGACAGTTTCAGTGAAGACTACCTTGTAGAAGAACAACGACCTGATGGACAAGAAAAAGAACACCTTCCTTCTGAAATAACATCAGTCCATTTCGATGATTCTCTGTGTCTACAACCAGAGGGCATAATTAAAAAACCAGATATGAATGAGAATCAAGATAATCAGCAGCCATTGTCTTGTTTCAGTGATGAGTCTATTATATTTTCAGAAATCGATTCTGTCCAGATGGTTGCAGCTTTGGACAATGTAGACATAGTTCCTGTGCAGGAGAAACATAATACTGCAGAATCTCTAAAAATACTGAAACGGAGTGATCAAGTGACTGTAGGTAATGATGATTCCCAAAGAGAAGTAATTGGAGAAGAAAAAGATAAAAGGTCTCAAAAATCCAAGTTAACTGGCACAAGGCAAGATAATTCATTTCTATGGTCAGGAGCATCATTTGATTTAAGTCCAGGACTGCAAAGGATTTTAGACCAAGTGTCCAGTCCTCTAGAAAATGAAAAGCCAAAATTAACTGCTACAGACTTGCCTGGTTTGAATGGAGAAAATGCAGAGGTAAATGACAGACAAGTGATTTCAAATACGGAGCCAAATCAAGTACAAGGAATTCCATTTTCACCTAAAATTGTAGTAAGAGGCAATCTTGAGGCACTACAGAACGATGTCATTCATGGTGAAACCTCCCTCTTGCCTTGTAAAGAAAACTGTATAGTTCGTGATAATGGACTCATTCCTCCTACACCTATTCCTTCTGATTCTAAGTTGGCATTTCCAGATATTCTTGGAACATCTGTGAAACTTAAGAAAATTAGTCATGGTTTTAAACTTGGTGAAAGTTCTTCATTTTGCTCACCTTCCAATAATAAAAACCATGATTTACATCCAGAGAGTAGAAATGGTTTTAAAGATAACAGTTCTATTAGAGACACAAATTTTTCACCGCAGTTACTGCAGAATGGATCACAGTTAACTCTAGCTTCATGCAGTCCTGAAAGTTTGGCCATAATTGATGTAGCAAGTAACCAAACTCTCTTTCAAACATTCATGAAGGAATGGCAAAGCAAAACTCGATTCTCCATCTCACTGGCTTGTGAAAAGATCAGTAATTTGACATCTTCTAAAAGTGCTACTATTGGTGGTATGTTTAAGCAAGTTAGTTTCCCTCAAGAAGCCTCTATTAGAGATGATGGATTTCCTGTTAAAGACTGTGATGACATCTTACTGGTTGGGCTTGCAGTATGTTGGGGTGGAAAAGATGCTTACTATTTTTCACTGCAGAAGGAACAAAAGCATTCTGAAATTAGTGCCAGTTTGATCCCACCTTCTCTGGATCCAAGCCTGACTGTGAAGGATAGATTACGGCACCTTCAATCTTGCTTTCACAAAGAATCTGATAAAGAACGTTCTGTTATCATCTATGACTTCATCCAGAGTTATAAAATTCTTCTTCTGTCTTGTGGCATCTCCCTGGAACAAAGTTACGAAGATCCTAAGGTGGCATGCTGGTTACTAGATCCAGATTCCAAGGAGCCGACTCTTCACAGCATAGTTTCCCATTTTCTTCCTCATGAGCTTCCACTCCTGGAAGAAATAGAGACTGGCCAAGGAATTCAAAGTCTAGGGCTGAATGTCAGCACTACGCATTCTGGACGATACAGAGCATCTGTAGAGTCCATTCTCATCTTCAACTCTATGAATCAACTTAATTCTTTGTTGAAGAAGGAAAACCTTCAAGATGTTTTCTATAAAGTGGAAATGCCCTCCCAGTACTGCCTAGCCTTGCTGGAACTAAATGGAATCGGCTTTAGTACTGCAGAATGTGAAAGTCAGAAACACATAATGCAAGCCAAACTGGATGCAATTGAGATGCAGGCCTATCAACTAGCTGGCCATAGTTTTTCCTTCACCAGTTCAGATGACATTGCTGAGGTTTTATTTTTGGAACTAAAGTTGCCACCAAATGGAGAGGGAAAAAACCAAGGCATCAAGAAAACTTTGGGTTCTACCAGAAGAGGAAATGACAATGGACGGAAGCTAAGGCTGGGAAAACAGTTCAGCACTAGTAAGGGTGTTTTAAATAAATTAAGGGCATTACATCCTTTACCAGGCTTGATCTTAGAGTGGAGAAGAATCACTAATGCTATTACCAAAGTGGTCTTTCCCCTGCAGCGGGAAAAACGTCTGAATCCTTTTCTTGGAATGGAAAGAATCTATCCTGTATCACAATCACACACTGCTACAGGACGAATAACCTTTATAGAGCCAAATATTCAGAATGTACCAAGAGATTTTGAGATAAAAATGCCAGCAGTAGTAGAGGAAAGCCCACCTTCCCAAGCTCTAGGAAAAGGCCTACTTCCTATGGGCAGAGGAGGAAGAAAGAAGGACTGTGCCATGAACGCTGGGCGCCAGACAAAGGTGGAAGAGAGAGCCTCAGACAGAGGAATGCCCTTCTCGGTCAGCATGCGACATGCCTTTGTGCCTTTCACAGGTGGTTTAATATTAGCGGCTGATTATTCTCAACTTGAGCTGAGGATCTTGGCTCATTTATCCCACGATCGTCGTCTCATTCAAGTGCTAAACACTGGAGCTGATGTTTTCAGGAGTATTGCAGCTGAATGGAAGATGATTGAGCCAGAGTCTGTTGGGGATAATCTGAGGCAACAAGCAAAGCAGATTTGCTATGGAATCATTTATGGAATGGGAGCTAAGTCTTTGGGAGAGCAGATGGGTATTAAAGAAAACGATGCTGCTTGCTACATTGACTCCTTCAAATCCAGATACACGGGGATTAGTCATTTCATGAGAGAGACCGTGAAGAACTGTAAAAGAGATGGATTTGTTCAGACCATTTTGGGAAGGCGTAGATATTTACCAGGAATCAAAGACAACAACCCTTATCATAAAGCTCATGCTGAGCGTCAGGCTATCAACACAAGAGTCCAAGGTTCGGCGGCTGATATTGTCAAAATAGCCACAGTTAATATTCAGAAGCAGTTAGAGACCTTCCACTCAACTTTCAAATCCCATGGTCATCGAGAGGGTTTGCTCCAAAGTGAAAGAACAGGATTGTTGCCAAAGAAAAAACTGCAAGGGATGTTCTGCCCCATCAGAGGAGGCTTCTTTATCCTTCAGCTTCATGATGAACTCTTATATGAAGTGGCAGAAGAAGACGTTGTTCAGGTAGCTCAGATTGTCAAGAATGAAATGGAAAGTGCCATAAAACTGTCTGTGAAACTGAGAGTGAAAGTGAGGATAGGTGCCAGCTGGGGGGAGCTGAAGGACTTTGACGTGTGATTGTAGGGAAGCCTGGTATAGGTAAAATCACAAGGAAAGAACAGAGATTGCCCTTTCACCTACTTTATGAAAATAGAAACCCCCTCAAGTCTTGATGAATTTAGGATAGTAATTTTATAGTGAGAGTTGCAAAATGTGCATCAGATTTTAATCCTCTATAATGTAAAAAAACTACTCGAGGCAAAATATCGAGTTTAATGTTTATATTCACTTTCAAAAAGAGTATCTGTGAAATTGCCTTTTATAGTTTACTGTGGCTTTAAACAGTTTCAGAACACATGCTTGAAATTATGTACTTAGCACTTTGGGTCTAATCTGCCTGGTTGAACATGAAGAAACATTTCTGCCTCAGGGGCATTTTCATCCCAACCAGGATTCAGACACTTGAAATACAGCAGGAGCTAGAGGCAGATAAGGATTTGGTTTAACATAAACCACCAGGGTTAGGTGATGTGTGTGATTTTCATCCAATATGAGTGTAAGACTACTGAAGTAGTATTTTAAAACAGCATTGGCAAGTAAATTAAGAATTCTATAATGTGGTAAGACTTGATATGGATGTAGTCTAGGTATGGATTTTCATGAATTGCCATTTCTTCTTCCTTTTCCTCTTGTAATTCATACAATGACTATATTTCTAATACTTAGGTATTATAAAACAAGCTACAAGCTACACCTCTCCAAGAAGTATTCTGATCTGTAAGATCGTATGTTTATATTGCATTATAAGATAACACTGCCAGAGAAGATAACACTTCCTCTAATCAGTCCCTTACTGCCTCTTTCTCTGTGGCATGGTGAGAATACTCATGATAAAAGATTGTACTTTATAATCCCAGTCAGAGCTGAATAACCAACTTTTTTTTTCTGTTAATAAAATTAATTTATTTCAGA EMBV3_01367 GGAGGTTTTCCGGTATTGGGCCCCCCAAATGGCATCACCCAATAGTTTCAAAAGCTTCAG Gene GeneID:531455|ATG4C:NM_001082442:69_cdna UTR3_Alt 2 NULL GeneID:531455 3 GENE ATG4C MGC148409 ATG4 autophagy related 4 homolog C (S. cerevisiae) EMBV3_08178 AGCATAAACAGGCCATGCATATAATATACAGTGTATTATATAAATATGTAAAGATTCCTC Gene GeneID:100300021|LOC100300021:XM_002692936:59_cdna Constitutive 2 NULL GeneID:100300021 15 GENE LOC100300021 NULL similar to transmembrane protein 123 EMBV3_25810 AAACATGTCCCGAACGGAAGCAGCCTCAGTCCTCGTAGAGAACAAGGACGGGACCTTTAA Gene GeneID:536097|SIRPB1:XM_002692241:1506_cdna Constitutive 0 NULL GeneID:536097 13 GENE SIRPB1 NULL signal-regulatory protein beta 1 EMBV3_10048 TACAACTTCGTGGACATCGCTGATGCAAAGGTGGAACCTTCAGGAGGTCTTCTTAGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28936 TCCTCAGCTCCTGAATTCTAGCCTGTTTGCTAGGTTTTCCTCTATAGCTGCCTCCTCAGG Gene BVV0102_266969 + 1 EMBV3_23242 GK000001.2:107688264-107774352 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12790 TTTTCACCCCTCTCCTCCGGCCACCCAGCCCGCTGCACTGAAAGGAGACTTTATTCTGAA Gene GeneID:509773|TMEM54:NM_001034364:85_cdna Constitutive 1 NULL GeneID:509773 2 GENE TMEM54 MGC127939 transmembrane protein 54 EMBV3_13870 CCTCAACTGATTCTCCCGGGGTTCTGGAGTCATAAACCGTGTTTCCTGAGAAGTGCTAGG Gene BVT0102_281613 - 0 NULL GK000008.2:112138178-112143051 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226631 1 XLOC_138052 Coding TCONS_00226631 XLOC_138052 Coding Coding LOC616903 8:112118002-112141021 j TSS169398 4251 1 TCONS_00226631_2 233 0.254293107504117 8 0.815666000521331 0 6.6335028765243e-05 0.00026775922304885 0.000282209904730077 2.32282842210943e-06 0 9.32854275218429e-05 1.25390991732385e-12 2.49792330843411e-05 0.000304239908211301 1.23856165507013e-05 1.5876499590443e-05 0 0 4.68798215907611e-06 0.00129852033096618 0.000480376305451637 0.00276046076590423 8.60390794121464e-19 0.000177628963096471 1.92812552039989e-05 0.000214712505258979 0.000328306716882884 0.000183695583674209 6.11276325986488e-13 7.12668752286374e-05 2.52620634577229e-05 0.000390894761964907 0.000103159706316556 3.3735401606793e-06 XM_005199316.1 LOC616903 PREDICTED: Bos taurus protein CutA homolog-like (LOC616903), 0.0 5836 100.00 0.760997412373559 NM_030021.2 Cutal Mus musculus cutA divalent cation tolerance homolog-like (Cutal), 2e-99 369 80.40 0.0945659844742414 TCONS_00226631_2 sp|O60888|CUTA_HUMAN CUTA_HUMAN Protein CutA; 2e-35 127 46.73 0.454935622317597 1 coding 0 0 0 0 -0.027686043229075 0.790772248768496 0.0162062498583233 0.747587208815445 ATGCGTGCCACTCAGTGGGCCCGAGTGTCTGGTCTGGTTGCTTCTGTCGCACTGAGAGCGAAGGCTGGGTCAGTGTGCGGCAAGCGGAGTGGCTGTGGTGGAGGCTTAGGCCGCCAGGGCGGAGCGGAGGCGGTGAACATCCTGCTTCCCGGCCAAACACGTATTAAGAGGAGGCGAAGGGTCAGGCCTCTGGAAGATGAAAATTCTCGAGAAGCTTCATTCAACAAATATTTATTGAACATAATCTGTGCAGGAACCTGTGCTAAATTCTGGGACATCATCTCAGGATCTAAGATCCTGACAGCCTCTCTCCTGACATACCCCGTGCTCAGGACCCTCAGCCTGCAGTTCCTTTCCGTTCTCACTGGCAGCTATGTGTCCGGCACGTACTCCATTGTTTTTGTCAACTGTCCCAACGAGCAGATCGCCAGAGATGTTGCCAGGGCTATCCTGGATAAGAAGCTGGCTGCCTCTGTGAACATCCTGCCTAAGGCCTCCTCACTATACTATTGGAATGGAGAAATAGAAGAAGCCACTGAGGTCCTGTTGTTAATAAAGACAAAGACTTCCAAGATCCATATGCTTTCCAGCTACATCAGGTTGGTGCATCCTTTTGAAATCCCAGAGCTCTTCAGTCTTCCCATGGACCAAGGAGATGTGCACTATTTAAAGTGGCTGGAGGAGGGCATGGAGGAGGAGTGAGTGGGGGCTTTCATGCCTCCTGCTGGGTGCCCCTAAGAGCCATCATTATCTGTTCTCCAGCTGAAGGGCGGCTTCTGTCTCGCATCTCTGGATTCCATGCATTTCTCAGCACAGAGGAGCTAAGTAACTTGTGGAGGGTGAAGGTCCAAGACCCCTGAGGCTAGAAGAGGATGCTGTGCCAGTCAGGCCAAGCAAGGACCCGGTGGCACTTGTCTCTGAGTGCCTCATGCATAAAGGTGGCCAGGAGTGGCAAGGTCACAGTGAGGGTGCGGCTGGTCTTCCCTGTTCATTGAGCCTAAACTGAGTACCACGTATGTTATCACTCTCCTGCTTCTGGTGAGGAATCACCTGGCGGCCTGTCACCCAGGAGTGTGTGGGGTGAAGGTCACCTTCTAGGGGAGCTGGAAGCACTCTATCCACAGGATGAATCGCTAATGGTGGAATGTCAGGGACAAGCAGGATTATTTCCTCTAGCTGAAGGTGGTGGTTGTTATTCCCGAGTCCTGAGGAAGTGGGCCTGGGAAAGGGCTTCATGAATGCAGGTAGGACTGGGAGGGGAGGGCTTAGACACAGCCCCAAGGATTGAGAGTTGGTCTTGACTCTTTCCTAGCCCGAAGGTGACAGACCTCAGAAAGCTAGGGTCCCTTGCTCAACAGAGACATGGGTTCTGAGCCTACCACACTGACCTTCTGATGTGAGCATGGAAGCCGAGCATCCTAAAGTGGGAAGAACCCGCGGGAGCTGCCAGACCAGAACCCCAGGGGTTCACAGGAGGGACCCTGAGGTCTGCTCATACTTCAGCCAGCACACCCATGCTTTTATTATTAATTTTTATGTATTGAGCTAAGTTTTTGCTGTTACAAGTTTGTAAACCAGTAGCCTAAGCCAGTCTTATAGATTTTGTAATGTTCAAGACCCCTGAGGCTGGAAGAGGATGCGGGGCCAGTCAGGCCAAGCAAGGACCCAGTGGCATCTGTAAAGCCAGTTTTATAGATGACTGAAGGGAATTGAACTGGCCTGAGGCCCAGAAAAGGGGCCGCTTGTGTTACAGAGGGGAGAGCCAAGGCTGCTCATTCCGTCGGCTGCTCCGTCGTCAGCCCCCGGGGGTGAGAAGAGAGCCTGACCTAGGCCCCCTCCCGGCTCTGCCACAGGGTGACCCCCCTCTCAGGGCCCTTCAGAGCCTTGCCCCAGCTCACTTTGCCACCGCCACCTCCACCTCTCCTCTCCTGCCTGGCACCCGTGGGTGCCAGGCTGGTGCCCTGTGTTGGGGGCGTCGCCTCTGCCCGAGCACCCTCTGCGCCAGTGCTGGAGAAGTGTGGCTGCTCCTCTGCGGGCCTGGTGTCCAGTTGGAGGGAGTCGCCCCTGCCCTGGGGTCCTGTTCCCTCTGCGCATCTGGGTCCGTCTCCTCCTGGATTGTGCGTTGCACCAGGTGAGGGGCATGCGCACGGCGACTTGGTCTCCTGCACATGGTTTGGTATATATTTCCCAAATTGATGTTTCCAGGATTTGAATAACTAAAGCTTTCTCTACTTTCCACAGTTACTTTCTCATTTACCAGGCTGGCAAAATCCAATTATTTTTTCCTTGAACTTTCTTAAAGTGGGATTAATTCCCAAGGAGATTTTCCTGTCTCTGACTATCATTGGTTCATTTTCTGTGCCGAGTGTGCTTTGAAAACTGTTTCTTGGCCTGCCTTTGCCTCAGTGTCACAGCTGACTATAGGAAATAGAGAACACCAGCTCTCTCTGCAGGTACTGTCCTAGGTCTTAACATTTATCCTTGTAACCCAGCTTACCCTCATTTTGCAGTTGAAACCTGAGATTGGAGAGTAGAGACGCTTAAAATAAGTGGCAAAATGGGCTCTGAAACCAAGTGTCTGACTCTAAACCTGATGCTCTTACGGTCTCTTTTATTTTTTTTTTTAAATTTTATTTTTAAACTTTACATAATTGTATTAGTTTTGCCAAATATCAAAATGAATCCATCACAGGTATACATGTGCTCCCCATCCTGTACCCTCCTCCCTCCTCCCTCCCCATACCATCCCTCTGGGTCGTCCCAGTGCACTAGCCCCATGCATCAAGTATCGTGTATCAAACCTGGAATGGCATCTCGTTTCATACATGATATTTTACATGTTTCAATGCCATTTAAAGAGGCTGGCTATATCTCTTTGTAGGCCAGAGAACCTGCTATAGCCGTCTCTAAGGAAGAGCTGTTCATTCCTAAAACATCTGCCTTAACAGTGTGGTGGGTTGGTATGTTGTGTGGTTTCCTTCTCCCCACAGATCTGGAGGCCAGTGATGTCGTCTTCATTCTGTAGATGAGGGAACAGCCTGAGAGGCTTGCCCAGCTCTACCACACTGCCCTCGATGTGCTGTGGGGGCGGGGGCTAGACTTGAGGGTTTCCACCCGGGAATTCCTTCCTAGCACTTCTCAGGAAACACGGTTTATGACTCCAGAACCCTGGGAGAATCAGTTGAGGGAACGAGAAGAAGTAGTAAAGTATCCGTGAATACTGAAGCTTAAAAGCATAAAGCTGTTACTGGTTTGAAGGAACCCATCTCCGTCAGATAAAAACTAGAGCAAGAAACGGTTGCTTATAGAGTTGAGTGTACAGTTACCTAGCCAGAACAGGAGTATAGAAGAGGAGTGGTTTCCATCTCGTTTTGCCTGGGATTGTCTAGCCCTGTCCACTGCAAACCCTGAGCTACTCCTGCAAATAAGATAAATGTGTACACGTAGTATGCTTTATACAAATCCTGTGAGTGGTGTTCTAAGAAATAAGCTTTGGAAGCAAAATAAATTCTTAATTTGGCAATTCTGATACTCGTCTGTACTCTTAACCTTGTTAGGCTATTTGAATGTTAACATTTGAATACTATCCAGTACGTTCTCTGGTGTTTTCCAAGGTTTAAATATTCCCTAGAGACTGAAGTTCTTTGTAAACACTATTAAGTTTAATAATCCTATTTGTTAAACAGATTTTTTTTTCAGATTTCTGTAATAAGAGGAAAAGTATGAAGAATGTTTGACATATTTTAAGAGTAAGTTATGATTTAGGGAATTTGTGAGAATTCTAATTTCTTGCTCCAAAATGCTAAAGGCACACAGAAGTGTGTTGCGAGTTTGTAAGCACTCACATAAACCACGCAGAAACGGGCACCCTCCAGCCTGGGGCGAACCCGTGACCTCAGAGGGGTCTCCAGGGCCCTTCATGTGCAGCCTGGGCGAGAGCCCGAGTCTCTGGGTGCCTGGGGCCGCCCACCTGTCCCTCCACTCCACTGATCTCCGAGACTCAGCCCCCCGCCCTGGCCTCAAGCGCGGGTTGTTCCCAGGGCAGTCAAAGGCCGCAGGAGGGGCAGGAAAGAGTGGGAGCTACAGTTAACAAGGGTGTCCCTGGCAGGTCAGACCGTAAAGAACTGGCCAGCAGTTTTTAAGGTCAGCCATTAACACTCAGGGTTTAACAGGCTACAGTAACTTTGGAAATAGAGTTCAGTTAGGCCCATGGCCTTCACCTGCCTGTAGCTTTTTCCTATCCCCCGCTTT EMBV3_36664 AACACACTGCCCTCTCGGCCTGGGAAACCCCTGTCTGTTTTTACCTTAAATATCTCCTGG Gene BVT0102_389261 + 1 EMBV3_26411 GK000009.2:71629901-71635912 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05744 GGTCAACGTCTCGCCGAAGGCCAAAGACACTTGTGTAAATGCGGTGTCAGAGAATGTTTA Gene GeneID:613714|C23H6ORF105:NM_001037621:232_cdna Constitutive 1 NULL GeneID:613714 23 GENE C23H6ORF105 MGC128787 chromosome 6 open reading frame 105 ortholog EMBV3_21385 TCTGAGCCGTCTCCACAGGCCCCATGACTTGCTTTGTTTCCCTTTTTGTAGGGTAAGGTT Gene GeneID:615668|CCDC117:NM_001105634:98_cdna UTR3_Alt 2 NULL GeneID:615668 17 GENE CCDC117 MGC166149 coiled-coil domain containing 117 EMBV3_41678 GAAGTGATTTCCGCGTAACAACGGGTACACTCGGAAGAGAAAGTCTTGGTTTCGCTGGTG Gene BVV0102_054676 + 0 NULL GK000018.2:60376334-60384420 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087368 1 XLOC_052454 Coding TCONS_00087368 XLOC_052454 Coding Coding LOC100139758 18:60363527-60379559 j TSS64881 2327 1 TCONS_00087368_4 546 0.136656639449936 5 0.855155635955337 2.6742609015419e-24 3.65321768062917e-97 5.99330821575168e-35 2.66519071304284e-08 1.44209345700683e-11 1.42708690847979e-24 1.2383520617505e-44 8.57603688361193e-05 2.18742354907397e-17 0.000539115818036786 4.05399016798644e-06 6.79192951124699e-23 6.34955080382118e-128 3.24931255563161e-06 9.70361318078262e-05 0.00030355380884302 1.37744809753113e-127 2.4480514575831e-10 3.30161233282372e-23 9.58701741636885e-51 8.20600890043922e-11 3.32336291457849e-05 1.32616602481488e-28 3.97985699748573e-05 2.3332775148735e-05 1.25793001289613e-20 5.63940471787479e-10 3.39705371196299e-07 2.81847430599947e-12 1.01352879459194e-21 XM_002701979.3 LOC100139758 PREDICTED: Bos taurus zinc finger protein 677-like (LOC100139758), 0.0 2978 99.46 0.718951439621831 XM_005258860.1 ZNF677 PREDICTED: Homo sapiens zinc finger protein 677 (ZNF677), 0.0 1106 77.12 0.584443489471422 TCONS_00087368_4 sp|Q86XU0|ZN677_HUMAN ZN677_HUMAN Zinc finger protein 677; 0.0 561 60.87 0.857142857142857 9 coding 0 0 0 0 -0.255645112468282 0.0948628037083008 -0.0109542992621648 0.902837730198811 GAGCCGGAAGTGATTTCCGCGTAACAACGGGTACACTCGGAAGAGAAAGTCTTGGTTTCGCTGGTGACCGCGCTATGCGTTCTTCGGGCATCGCGGCCCCCGACCGGGGTTTCGGAGCGGCTCCCAAATAATCTTACCTGAGAAAGAAGCTCAGAGGAAGAGGAAAGAAAGGAGAAGGGATGGCCCTTTCCCAGATTATCTTATAGGAATCCTTTCTGCTGGATTTGCAATTAACAAATTATCACCAAGAGAGAACATTAATTTAGTAGAATTATATGGAGATGAAAACCATGGCATCAAGGATTTTGACCTCAAGGAAGTCTGTGAAAATATGCAGAAGAATGAGAGTGAGTGGGGATATGATGCAAGAAATGACAAAAAAGTGCTTTTGACCCATAACAAAAATCTCAGTCAGAGAGAAGATCAGGATAATAAATCCTTAATTAATTTTCCTCAGAGTGTTTCTGTAAGAAGTAATACATATGAATATTTCATGCATGACAAGCCATTCATAAGAAGTTGGTTAACAGTGAAAAATAACATGAGCATTGCTGGAAGCAAAGATACGAAGTATTTGGACAATAGAACTGGAGCAAGGCTGCAGGCGCAGGTGGCTGAACTGCAGAGATTTCCAACTGAGGAGAAAATGTATAGAGGCCCTCAAGTTGAGAAGTCAGTTAACAATGGTTCCTCAGTTTCCCCACTTCATAGAATTCCTCCTACTGTGGAACCTACTGTGTTACCCACACAACACAGGAGAACACACACTGAAGAAAAATCTTACAACTGTAATGACTGTGGGAAGGCTTTTAGCAAAAGCTCAAACCTCAGAAATCACAAGAGAATCCATTCTGGACAGAAACCTTACAAATGTAATGTGTGTGGCAAAGCCTTTAACCAGGGTTCTAATCTCACTACACATCAGAGAGTGCACACAGGAGAGAAACCATATAAATGTGATGTCTGTGGCAAGGTCTTTAGTAGAAACTCACACCTTGAAAATCATCAGAGGATGCACACTGGAGAGAAACCTTACAAATGTAGTGAATGTGGTAAGGCCTTTATCCAGCATTCACTCCTTTGGAGTCATGAGAAAATGCACAGTGGTGAGAAACCTTACAAATGTAATGAATGTGGCAAAGCATTTGCCGAGCGGTCAAGCCTTAACAAACACAAGAAAATCCATACTGGAGAGAAACCGTACAAGTGTACTGTGTGTGGCAAAGCCTTTACCATGAGATCAAATCTTACTCAGCACGAGACAATCCATACTGGAGAGAAACCTTACAAATGTAGTGAGTGTGGCAGAGCTTTTACCCAATTTTCACGCCTTACTCGACATCAGAAAATGCACACTGGAGAGAAACCACACAAGTGTAATGTGTGTGGTAAGGCCTTTATTGAACTTTCACAACTTTGGGGTCATGAGAGAATTCATACTGGAGAGAAACCACACAAATGTAATGTGTGTGGCAAAAGGTTTACCCAGCGTTCAAGCCTTATGGCACATCAGAGAATTCATACAGGAGAAAAATCTTACAAATGTAAAGACTGTGATAAGGCCTTTATCCAACGTTCCCAACTTTGGGGTCATGAGAGAACTCACACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAAGCTTTCACAATGCGTTCATACCTTACTCAACATAAAACCATCCATACTGGAGAGAAACCTTACAAATGTCATGAATGTGGCAAAGCTTATACCCAATTTGCAAGCCTTACTAGGCATCAAAAAAGGCATACTGAAAACAGACATAAATCCAACACATGTGGCAGTGCTTTTATTCCGAACTTGAGCTTTGGGGATCATCCAATAATTCATAATGGCCAAAAGGTACATGATACGATGCACAGCATCACTAATCATCGGGGAAATGAAATGTTTCTGGATCTAACCACCACCACATACAGATCCTTCTTCGAGATCCCAGACCGCTGAATTGCTTCAGTCTCACAGGACTGGGTGCAACCTACTGACTGGCACAAACAAGCTTTTGACTTAAGCCATTTTCATTGTAAGAGGAAAACATCTTCAGTTCAGTTCAGTGGCTTAGTCATGTCCGACTCTTTGCGACCCCATGGACTGCAGCACGCCAGGCCTCCCTGTCCATTACCAACTCCCGGAGTTTACTCAAACTCATGTTCATCGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCCGCCTTCAATTTTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGGTCTTCACATTAGGTGGTCTAAGTATTGGAGTTGCAGCTTCAGCCTCAG EMBV3_30295 AAAGGGCACAGTTTGCATATTTTTACATGAATACCAATTTATTGTTTAGTATTCCTCTGC Gene GeneID:540637|LIMA1:XM_002687274:147_cdna Constitutive 2 NULL GeneID:540637 5 GENE LIMA1 NULL LIM domain and actin binding 1 EMBV3_12152 GAGAAGCCATATCTCTGTAGTGAATGTGGGAAAGCCTTCAGCCAGAGCTCCTCCCTTATC Gene GeneID:100125579|ZNF554:NM_001105037:2_cdna Constitutive 0 NULL GeneID:100125579 7 GENE ZNF554 MGC151533 zinc finger protein 554 EMBV3_28743 GATCATTGTCAGCTCCTACGTCTTCATTATTTCCAGCGTCCTCCACATTCCTTCCATGCG Gene GeneID:516022|LOC516022:XM_002699179:87_cdna Constitutive 0 NULL GeneID:516022 29 GENE LOC516022 NULL similar to olfactory receptor, family 8, subfamily G, member 1 EMBV3_18129 AGTGTCTTTACGTAAACGTAGGTGCACAGCCGCCGTCGTGAACTATAAGGAACCCACGCT Gene GeneID:614056|SGOL1:NM_001081617:10_cdna UTR3_Alt 2 NULL GeneID:614056 1 GENE SGOL1 MGC155146 shugoshin-like 1 (S. pombe) EMBV3_11154 GGGTTAGGGGACTGCAATTTCTACTTTCATAGAGTCATAGAATTTTAGATGGGGCAGAGG Gene GeneID:100125225|SLC17A6:NM_001103110:10_cdna UTR3_Alt 2 NULL GeneID:100125225 29 GENE SLC17A6 MGC166269 VGluT2 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 EMBV3_32453 CTCTTGATCAGAACAGCCAGTGCCAATCTGAGGTTCTCCGCTCCATGACCCAGTGACTTG Gene BVT0101_018921 + 0 NULL GK000021.2:30283930-30495826 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119087 TCONS_00119082 TCONS_00119083 TCONS_00119081 TCONS_00119086 1 XLOC_072811 NonCoding TCONS_00119083 XLOC_072811 NonCoding NonCoding - 21:30391647-30433602 - TSS89263 373 1 TCONS_00119083_1 38 2 0.99115698145588 0.0018013078213376 0.000905261426522679 0.000848759383869382 0.00157739902549867 0.00268886352992698 0.000763973403014338 0.00101664817391064 0.000871505818530018 0.00373423433017682 0 0 0 2.64450489662581e-08 4.22129022259506e-08 0.000414318803817297 0 0 0 7.68969692639146e-05 0.000147552339600283 3.69190764931959e-05 0 0 0 0.000213478650400668 3.36933165947819e-09 0.000394813680892947 0 0 0 0 noncoding 1 1 1 0 -0.328230105033155 0.366167061840653 -0.418605933736301 0.000607685380873381 TGCAGTTACCCTCTTAGGATGCTGCCTGAATTTGTGTCCATGCAATATAGATACGTCATATGTCTTTCATCCTCCTGGGTCAGATGTTTCTACTTCAAGATTTTGAAGTGATTCTGAAGTCTGATGTAGAAAGATGTTTTTAGTCCTGATCCCTGAGCAGCAGGCCCTGTGCCACAGAGGCGGATATTTCCGGCCTCTTGATCAGAACAGCCAGTGCCAATCTGAGGTTCTCCGCTCCATGACCCAGTGACTTGGCCCATTCTGAGCCTCTGTCATCTTCTCTAGAACATGATTACTGGTTGTGGAGATGAGTGGCTTTCAGCTGTTAAGATTTTTTAAAATTTATGCTATTAAAGTATGGTTGATTTAACAG TCONS_00119088 s 5' 125553 TCONS_00119088 s 5' 167507 EMBV3_07447 TGTGGCGGAGTTCATCACCGAAAATACAGGAGAGTGGATAAAGCAAAATGGAGGCTGGGA Gene GeneID:282151|BCL2A1:NM_001037100:6_cdna Constitutive 0 NULL GeneID:282151 21 GENE BCL2A1 NULL BCL2-related protein A1 EMBV3_06206 AAATGTGTCTTCCTTAGACCTGGACCCTGGTGCTGAAAAGTCGGGGACCACTGCTCTAGA Gene BVT0102_246989 - 0 NULL GK000007.2:105660399-106008939 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214841 TCONS_00214842 1 XLOC_130775 NonCoding TCONS_00214841 XLOC_130775 NonCoding NonCoding - 7:105767334-105788567 - TSS160590 1187 1 TCONS_00214841_2 53 0.590564448188711 2 0.944188018085908 0.000443200702437884 0.000668766750634356 0.00127072651529349 0.00152511058479704 0.000203429346493854 8.88989850839963e-05 0.000206345562601644 0.000156504035465536 7.06779304236893e-05 7.48768455721974e-05 1.32911559203651e-13 9.16620115929763e-12 2.42218263218741e-05 8.50194051656953e-05 2.89329183749922e-05 4.4501390181778e-05 0 0 0.00206503586331896 0.00367211441703853 0.000941156849173349 0.000100025863702966 5.87445548401978e-12 0 0.000516017648799171 0.00083017557329566 0.000823094622719251 3.23679549714076e-05 6.15408282899149e-05 0.000106366570633012 XM_005218128.1 TCN2 PREDICTED: Bos taurus transcobalamin II (TCN2), transcript variant 2e-42 178 79.43 0.171861836562763 0 noncoding 0 0 0 0 -0.0281171009215267 0.78839883382227 0.0120697691828296 0.807802991358624 AAAAAAAAACAACAAACAGGCAGTTTATTCCTGATAACGGGGGAAGTGTAGGGCCTTAGTAGAGGCAAGTGTTACTGGCCCTCCAGATTCTGTCCCCAGGAAAGGTCCTTCTGCTGGTGTCCTCAGAGCCAACAGAAGCAAAGGAAACCTTTGTTGTTTGCTCAAAGGACAGAGAGACGTGCTCAGGCTCTAAGTTGGGGGTCCCCAAACTCGGGGATTGAATGCCTGATCTGAGGTGGAGCTGAGGTAACAGTAATAGAGCCAATGGGCACGGTTAATGCAATGCACGTGTGAATCATCCTGAAACCACTCCCCACCCACATGTCCTTGGAAAATGTGTCTTCCTTAGACCTGGACCCTGGTGCTGAAAAGTCGGGGACCACTGCTCTAGAGCGCATGCGTCCCCTGAAGGCCGCAGTGGGGGCCGCTTGACAAAGCGCGGGTTTGCAGCCTAAGGAAGGGTCGGAGTTCTCGGCGCAGCTGCAGTCAGCTCCCGTCTCGCGAGACTGAAGCGCCTGGTGCGGCATCTCTGCAAATGGCCGCGCCCTGCAGAGCGGAGGCCTGGCCATAGCCGTTTCACGCCAGGAGCTCAGGTGTGAAGCCCGGGCGTGAGGCTCTGCATGTGGCATCCTATGAGCAAGCAAAGCTAGACCCTGCACAAAGGAAAAGGAAAAAAAAAAGAGAGACTTTATGACCCAGATTCTACTTGTATTTCCTGAGAATTGTTGATGAGCTTTGGAGGTGCCACAAATAAGGTGACTCAGTGATAAAGAATCTGTCTGCCAGTGAAGGAGACACGAGAGACGTGGATTCGATCCCTGGCTTGGGAAGATCGGCTGGAGGTGGAAACCGCAACCCACTCCAGCATTCTTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGCAGTCTGCAGTCCACGGGATCGCTGAGTGGAACACTTCTGAGCGACGGAGCATGTGCATCCACTTATCCGCTTTCATTATTTGCAGGGTTAGGACAGTCTTAAGGAGGTCAGCATATTCTAAACAACCCCTTAGGGCGCTGTGATTTTACCACCATCAAAATAAAAAACTGAAAGACATAGCAGATGGCAGATTTAATTTTTACTGTACCGTTAATACAAGCAATACAAAGTATCAGTCTGCAATTCCAGTTTTTCTTTGTAACCCTAAAAATGTGGTCATTG TCONS_00218258 TCONS_00218259 r 5' 106937 TCONS_00218258 TCONS_00218259 r 5' 106937 EMBV3_01834 ATAAGGGACTTGAGCAACTTCAGATTTGGGTGTGTAGAGGTGGGGGTGGAACCAGTTACC Gene BVV0101_029051 + 0 NULL GK000014.2:72003343-72100483 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33530 AGCAACGGTATCACGAGACACTGGTTAACAATACACCACAAAGGTCCAGTGACGCCCTGG Gene BVV0102_211187 - 0 NULL GK000012.2:86287859-86311456 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035896 TCONS_00035897 1 XLOC_021022 Coding TCONS_00035897 XLOC_021022 Coding Coding LOC100848832 12:86297040-86298668 = TSS26236 1508 1 TCONS_00035897_1 36 2 0.0743700061462815 0.00579068298501087 0.00367004200139985 0.00338982248548864 0.00155463125916081 0.00300254795435545 0.00144295606997306 0.0025876008158053 0.00200914982508585 0.00497951091324816 0.0025880892431367 0.00214514310308791 0.00260765826076301 0.000654415355679768 0.00402140733923521 0.00290781425178338 0.0268848213248209 0.0134012857000138 0.0291310409230024 0.0012663368688903 0.00190115122999182 0.00234400225522635 0.021302125553865 0.0107160339541912 0.020102843624457 0.00307513846809711 0.00257689842823842 0.00326882235866121 0.00440994924059403 0.00417918425413199 0.00545952340595912 NM_001038190.2 ARGLU1 Bos taurus arginine and glutamate rich 1 (ARGLU1), mRNA. 8e-106 389 100.00 0.141909814323607 NM_018011.3 ARGLU1 Homo sapiens arginine and glutamate rich 1 (ARGLU1), mRNA. 3e-149 533 92.27 0.244031830238727 TCONS_00035897_1 sp|Q2TA42|ARGL1_BOVIN ARGL1_BOVIN Arginine and glutamate-rich protein 1; 2e-17 73.6 100.00 0.972222222222222 1 noncoding 1 1 1 1 0.771781286680937 0.0245062701136095 -0.0637789153064364 0.377190398848438 GCTGAAGAACAGTTGAGAATTGTTGAAGAACAAAGAAAGATTCATGAGGAAAGGATGAAACTAGAACAAGAGCGACAGCGTCAACAAAAAGAAGAACAAAAAATTATCCTGGGCAAGGGGAAGTCCAGGCCGAAACTGTCCTTCTCGTTAAAAACCCAGGATTAGACTGCGAACTCTGAACTTTTTACGAAGAAATATGGAAAAACTTTGTATGGTAGCTTCATGTTGAAGTGGTTTTTTTTTTTGTTTGTTTTTTGTTTTTTTAATTTGGAAAATCTGGAAAGTTAGCTTGTTTTAATAGGGGCTATGCTCTACACTTCCCTCCCCTCCCCCTGCCCGCCCACCTCCCAACCCACTCTTAACGTCCATAAGTTTTTACTGACCCACTGACTTTAGAGTTACACTCTGTTTACTACATCATAATGCTGGTTTTGCTGACTTTTTGTTTTTTTATATATTTATAAAAAAAGAAAAAGTTGGTGATTGCATTGGAAGCCCAGGGCGTCACTGGACCTTTGTGGTGTATTGTTAACCAGTGTCTCGTGATACCGTTGCTCTTGGTGTTCCTGACACAGGTAAGGAAACAGTTGGTCACCTCTGGTACAAAATACATACACAATTCAGTATTGTCTCTGTTCACCTTGTTTTTATTTCATTGACAGAATCAAACCAGCATTCCCCACTGTGTAAATAAATGATTTTGCTGAATAAAGTAAAGTCTTAAATTCATATGTTGAAGCAATTTTTTTTAAAGTTCTGATAAGTCTTAAAGAGGGTGGTTTACTTTTTGATGTCAACAATCTAGAAATCCTAGGACTATGCTATATATTTCTTCTAGCTTATACTTTGAACATAGGATTTATATGTACTTTAAATATACTTGAGAATTAGTATTTAATGGCTATTTTTACAAATACGTAATTTATGCTGACACAAATTATGGCAGCAATATTACCTTTAAGAAAGATTAAGCACCCAGAAAAAGATGTAAATTCTCGATTCTACACCTCTATTTTAGGATAATAAGTATTATCACCACAAATTATACTTAATAAAGACTAGAAAAATGCTTCTAAAAATTTACAGTATCTTAAATTATTTTCACAGTGGGCCATCAGAAAGAACTTAGCTCTGTTCTTTTACAAAAGGCTAAGGTGGTCAGATCACCCTCAGGGGAGGGTACCTGCACGTTTCTTTTGGGGAAAACACATTTCAACTTAAAAGTTTTTCTTTTGTTTTTGCATGTGGTATCTTATAAATGACTTTTATACACTAGAATCTGCCTCGTTTATCTTTACATAGGTTTAAGTCAACTGGCATTAAAACATTTATTCAAGAAAAGGAGATGGATATAAAAAAGCTGCCTGAGATGCATAGATATGTCATCAAAGTAGAGAAACCTTCCAATATTTTTGAGACAGTTTGACCAGTCTTTTAAAAAGTGAAAACATAAGTTAATGAGATGACTAAATGCTAGATTATTTTGTGTGTGCATGCTTTAGTTTGAG EMBV3_02972 GCAGGGACCCTTGTCACATAGTGTTTCAAAATGTCCCATCAGGCATTCACGAAGGACTGG Gene GeneID:539701|FKRP:NM_001099714:358_cdna UTR3_Alt 1 NULL GeneID:539701 18 GENE FKRP NULL fukutin related protein EMBV3_24456 TATAGGGGCTGCCGGGTTCTATTTCTCCTCAGATAACTTGCTGCTTCTCCTAGAGTTAAC Gene GeneID:538608|NRIP3:NM_001102218:184_cdna Constitutive 2 NULL GeneID:538608 15 GENE NRIP3 MGC148622 nuclear receptor interacting protein 3 EMBV3_26599 GTCCATTCAGAGAAGCGTCCGGAAGAGCAGCACCAGCAGTGACAACTTCAAAGCTCTGCT Gene GeneID:517882|NHSL1:XM_002690276:26_cdna Constitutive 0 NULL GeneID:517882 9 GENE NHSL1 NULL NHS-like 1 EMBV3_37645 TTCATTGGGCTATTGGTTGAATTCATGGACGTGGAATCGGCAGATGTGGACAGCTGACTG Gene BVT0102_444822 + 0 NULL GK000004.2:113605803-113609545 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190316 1 XLOC_116351 NonCoding TCONS_00190316 XLOC_116351 NonCoding NonCoding - 4:113607999-113609187 - TSS142684 1188 1 TCONS_00190316_1 45 0.367845117845118 1 0 0 1.6916551939217e-05 0.000101264352955147 8.38802936076982e-05 0 0 0 0 7.96982909279491e-05 0 0 0 0 0 0 0.000266783972558566 0 0 0 0 2.55532659653102e-05 0 0 0.000112893259282956 0 2.37220657993177e-05 0 0 0 0 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 1e-25 122 96.00 0.0622895622895623 NM_014752.2 SPCS2 Homo sapiens signal peptidase complex subunit 2 homolog (S. cerevisiae) (SPCS2), mRNA. 6e-17 93.3 73.81 0.134680134680135 0 noncoding 0 0 0 0 -0.0760576716863634 0.584761935915513 0.0566850257009285 0.266502302045861 ATAGGGAGGCCTGGTGTGCTGCAGTCCATGGGGTCGCAAAGAGTTGGACATGACTGAGAGACTGAACTGAACTGAACCTAGGGATGTCTGGCCACTGGGTAGGGTTTTACACTTTACAAATGCTTCTGTAGACCATAGAACCAATTAGGGTCCTGCAAAAACCCAGGGTCTCTCAGGATCTTCAGGGGATTATTTCCAGGACTCCCCTGGATAGCAAAATCTTTGGATGTTGGAGTCCCTTCTTTAAATGGTATTGCATTTTCATATAACCTTACTCACTCATGTCCTCTTGTATACCTTAAATTACCTCTAGATAATTATAATACTTAATGTAAATGCTATATACAGTTGCCTGCACCCGGGAAAATTCAAATTTTGCTTTTTTTGGAACTTTCTTTTATTTTCACCTGCATATTTTCATTGGGCTATTGGTTGAATTCATGGACGTGGAATCGGCAGATGTGGACAGCTGACTGTAACTAGGAAATTATTAACTCTTACAGATGAATAAGTCAAAGTCCAGGGACAGAAAGTATCTTTTGTTAAAAAGAAAACAGAACAAAACTGCACACGAAGACTGTGGCAAAACATAGAATCTTGGGCTCCCGGTTCCTCTTGTGATATGAGGCTAAACAACAGCTGAGCTCGCGGGCAAACGCTTAGTAGACAGTTGCTGACTGATTAGAGTAAGATCCAACGGTTTAACAGTAAGGTTTGTAGGAAGTCTCAGAGTGAGGCCCTGGCTTTTCTCTGTATCAACCTCATGTCCCAAAGGCGGTTTCTAAGCAGTTCCAGACAGAGTGTGCCCGTGGGAGTTGCCCTAGCTGGCCGGCCCATTTTGAGCTGGCAATGAGGAATTTTATTGACTTTATAAAGGAGCATTTCCTTCCGATCAGGGTGGGTAGATGAGAAAATCCTCTCTTCTGAAGGACTAAGACCCTGCTTGGCCATCTGAACGCTGCCTCTAAATCAGCAGTCGCACTCCACTCAGGAAAGTTAATTCATTGTTTCCTCAACTGCAGGGCGAAGGGTTGGATTTAATGATGTCTAAGTCTCTCCTGGAAACCCCGGAGTCGTTTATCACGCACTTACGACGTGCCTAGGGCCGCGCGGGTGCGGAGGCTGATATCTCTCTGGTCACACGAGACGCGAACATCTCTCTAACACCTGGTGTGCTGTCGTGCAAAG TCONS_00182870 TCONS_00182871 . 5' 353 TCONS_00182870 TCONS_00182871 . 5' 353 EMBV3_38447 CAGCTGTTGAATCTGTTGTGGACTGTGTGTGGAAACCGTGGACTGTGTAGAGCACAGAAG Gene BVT0101_028517 + 0 NULL GK000001.2:127699863-127736165 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002066 TCONS_00002063 TCONS_00002073 TCONS_00002064 TCONS_00002067 TCONS_00002071 TCONS_00002061 TCONS_00002060 TCONS_00002072 TCONS_00002074 TCONS_00002068 TCONS_00002065 1 XLOC_000513 Coding TCONS_00002073 XLOC_000513 Coding Coding XRN1 1:127615538-127704353 j TSS1062 8420 1 TCONS_00002073_8 1207 0.00855106888361045 32 0.905555430450154 8.35938095622875e-05 0.000141102592692776 0.000401624837123151 9.78334360510295e-05 0.000238714764059637 0.000148023851925262 3.14127993927864e-05 0.00017194402396772 0.00042938448989873 4.99977211990353e-08 2.42698521790684e-13 1.97204288760487e-07 2.68878496082284e-05 0.000151095883797514 2.10633614994514e-07 0.00336306218642432 0.000922519635437524 0.00267691626247108 0.00045888001398415 1.34389692238184e-08 0.000188133342967693 1.62030419755507e-15 6.49846727308505e-05 0.00071947905494766 0.000612533639940244 7.42747734759595e-05 0.000150160939382687 0.000260508643530226 3.91232780103206e-06 0.000433738028122927 XM_005201893.1 XRN1 PREDICTED: Bos taurus 5'-3' exoribonuclease 1 (XRN1), transcript 0.0 1.508e+04 100.00 0.993230403800475 NM_011916.2 Xrn1 Mus musculus 5'-3' exoribonuclease 1 (Xrn1), mRNA. 0.0 4545 84.33 0.489311163895487 TCONS_00002073_8 sp|Q8IZH2|XRN1_HUMAN XRN1_HUMAN 5'-3' exoribonuclease 1; 0.0 2121 87.04 0.99917149958575 0 coding 1 1 1 1 -0.0353192919411162 0.748203242655207 0.0473740642202166 0.402903826906174 TTGTTCAAGTCTCAACTGTATGCCTATGATAAAAATGGCCAGATAGAAAATGTGACTTTCTGGCTGATCAAGCTGCATGTTATGTTCAGGCAATACAGTGGATTTTGCACTATTACTATCATGGAGTTCAGTCCTGGAGCTGGTTTTATCCGTACCATTATGCACCTTTCCTGTCTGATATCCGCAACATCAGTACACTCAAAATCCATTTTGAACTGGGAAAACCTTTTAAGCCATTTGAACAGCTTCTTGCTGTACTTCCAGCAGCTAGCAAAAATTTACTTCCTGCATGCTACCAGCATTTGATGACCAGTGACGATTCGCCAATTATAGAATATTATCCACCTGATTTTAAAACTGACCTAAATGGGAAACAACAGGAATGGGAAGCTGTGGTACTAATACCTTTTATTGATGAGAAGCGGTTGTTAGAAGCCATGGAGACATGTAACCACTCCCTCAAAAAAGAAGAGAGAAAAAGAAATCAACATAGTGAGTGCTTAATGTGCTGGTTTGACAGCAACACAGAGTTCACCTACCCCTCTCCATGGCCAGAAAAGTTCCCTCCCGTAGAGCGATGCTGTGCAAGGTATAAAATAATATCATTAGATGCTTGGCGTATAGATATAAGCAAGAACAACATAACCAAGGTTGACCAGAAGGCATTATATTTCTGTGGATTTCCTACTTTGAAACACATCAAACACAAATTTTTTTTAAAGAAAAGTGGGGTTCAAGTATTCCAGCAAAGCAGTCGTGGAGAAAACATGATGTTGGAAATCTTAGTGAATGCTGAGTCAGATGAACTTAGTGTAGAAAATATAGCTTCATCAGTGCTTGGGAAGTCTGTCTTTGTTAATTGGCCTCATCTTGAAGAAGCTAGAGTTGTTGGTGTATCAGATGGAGAAACTAAGTTTTACTTGGAAGAACCTCCAGGAACACAGAAGCTTTATTTGGGAAGAACTGCACCACCATCTAAAGTGGTCCATCTTGGAGACAAAGAACAATGTAATTGGACAAAAGAAGTACAAGGAATTTCAGAATACTACCTGAGAAGAAAAGGAATAATAATAAACGAAACATCTGCAGTTGTATATGGTCAGTTACTCACAGGTCGTAAATATCAAATAAATCAAAATGGAGAAGTCCGTCTAGAGAAACAGTGGTCAAAACAAGTTCTTCCATTTGTTTATCAAACCATTGTCAAAGACATCCGAGCTTTTGACTCCCGTTTCTCCAGTATAAAAACATTGGATGACTTGTTTCCTCCTAGAAGTATGGTCTTTATGCTGGGAACACCCTACTATGGATGCACTGGAGAGGTTCAGGATTCAGGGGATGTGATTACAGAAGGCAGAATTCGTGTGGTTTTCAGCATTCCATGTGAACCCAATCTTGATGCTTTAATACAAAACCAGCATAAATATTCTATAAAGTACAACCCAGGATATGTGTTGGCCAGTCGCCTTGGAGTGAGTGGATACCTTGTTTCAAGGTTTACAGGAAGTATTTTTATTGGAAGAGGATCTAGGAGAAACCCTCATGGAGACCATAAAGCAAATGTGGGTTTGAATCTCAAATTCAACAAAAAAAATGAGGAGGTACCTGGATATACTAAGAAAGTTGGAAACGAATGGATGTATTCATCTGCAGCAGAACAACTTCTTGCAGAGTACTTGGAGAGAGCTCCAGAGCTATTCAGTTACATAGCCAAAAATAGCCAAGAGGATGTGTTCTATGAAGATGACATTTGGCCTGGAGAAAATGAGAACGGTGCTGAGAAAGTTCAAGAAATTATTACTTGGCTAAAGGGACATCCTGTCAGTACTTTGTCTCGGTCTTCTTGTGATTTACAAATTCTGGATGCAGCTATTGTTGAGAAAATTGAAGAAGAAATTGAAAAGTGCAAGCAAAGAAAGAATAATAAGAAAGTTCGAGTGACAGTGAAGCCCCATTTGCTATACAGACCTTTGGAACAGCAACATGGGGTTATTCCTGATCGGGATGCAGAATTTCGTCTCTTTGACCGTGTTGTAAATGTGAGAGAGAACTTTTCTGTTCCAGTTGGCCTTCGGGGCACCATCATAGGAATTAAAGGGGCTAATAGAGAAGCTGATGTACTATTTGAAGTATTATTTGATGAAGAATTTCCTGGAGGCTTAACAATAAGGTGCTCACCTGGTAGAGGTTATCGACTGCCAACAAGTGCCTTGGTAAACCTTTCTCATGGGAGTCGCTCTGAAACTGGAAATCAGAAGTTGACAGCCATTGTGAAACCACAGCCAGCTGTGAATCACTATAGCTCAAATTCATCAGTTTCATCTGGGCATTTGGGAGGCCTGAACCATTCCCCTCAATCACTTTTTGTTCCTACTCAAGTACCTGCTAGAGATGATGATGAATTTTGTAACATTTGGCAGTCCTTACAGGGATCTGGAAAGGTTCAACACTTTCAGCCACTGCTACAAGAGAAGGGTGCAGTTCTACCTCAAGAAATAAGTCAAGTAACTCAACATCATAAAACTGGCTTTAATGACAACAGCGTTAAGCCGAGAAAACATGAGCCTCACAGAAAATTTAAAGAAGAGTGTAAGAGTCCTAAAACTGAAAGTCGGTCACAAAAAATGTCAAATAGGCAGGCATTTGGAGGGCCTGCCAAATGTAATATTAAGCTACTGAAGAGAAATGAAAATTCAGAAGTCTCAGAAAATCAAAAGGTTGTGACTGGTTATCCAAGTGGTGTTGATAAGCCTAATCCTGGAATTGAGAACTTCTTAGCATCCTTGAATATCTCCAAAGAAAGTGAAATACAGTCATCTCATCATGAAGAGCCTCCAAGTGAAGAACATTTGTCACCACAGTCATTTGCTATGAAAGGAACTCGGATGCTTAAAGAAATTCTAAAAATTGACAGCTCTGACAGTATGGATCATAAGAATGAAATGAAACAGTTTGGTAATGAAGTCACTGTTTCCTCTAGTAGAAGAGATGAATATGGATCTTCCTCACAACCTAAACAAAATAAGAAATTGACATCTTATATGAACAAGCCTCACAGTGCTAGTGAGTACCATAATGTTCAGTCTATGGACAGTGTGTGCTGGCCTACTGGCCAGATTCCTCCTATGTCCACACCAGTAACTGAACTTTCTCGAATTTGTTCCCTTGTTGGAATGCCACAACCAGATTTCTCCTTTCTGAGAACACCACAGACAATGACAGTTTGCCAGGTAAAATTATCTAACGGCTTACTGGTACATGGGCCACAGTGCCATTCTGAAAATGAAGCCAAGGAAAAAGCTGCATTTTTTGCTATACAACAATTGGGCTCCTTAGGAGTGAATTTCCCTTTGCCTCCACCAGTATTTCCAAGTTATCCTCCAGCTGTACCACCTGGAACCATTCCTCCAGTTTTTCCCCAGCCTACTGGCTGGGATCACTATGGAAGCAACTTAGCATTGGGGGCAGCTAATATCATGCCTTCATCATCTCATCTCTTTGGCTCAGTGCCATGGGGACCACCAATGCCAGTTCCTGGGAAGCCCTTCCATCATACATCGTATGCTGGGACCATGCCCATGGCTGGGGGGATGCCAGCTGGTGTACACAATCAGTTCATACCTCTACAGGTAACTAAAAAAAGAGTTGCGAACAAAAAGAACTTTGAGAATAAGGAGGCCCAGAGTTATCAAGTCACCCCGCTTCACACTAGCCAGTCAGCATCTTCTGATGTCACCAAAGGAATTCCACAGGAGACTTCATCAGCTTCCTTACCATCCTCTCAGATCCCTCAACCTGCATCTTCTTTTCAAGTTGCAGCTGCTTCCCCAGGCCATAGTATGCCTCACCAGAAGTCGGCACCAAGCTCTTCAAGAAGAAAATCAAGAAAACTGGCTGTCAATTTTGGCGTTTCTAAACCTTCTGAATAAATTTGGTACTTGGAATTAAATTTCTTTACTTTCCTCCCACCTTTTTATAAATCCATATCTGTGTCTCACAAGAAATTACAATGTACTATTTTAAAACAATACATTTCAATTAAATTTTTTAATTTTCTAGTTGCCAGGCACTTTCATGCTATTTAAAAGACTGTAAATCAAATTGTGCATCTTAAGTATGTACAATTTGTTTTACATCAATTATACCTCAACAAAGCTGTAAAAAAAAACAAAACTAAACTAAAACCTTGTGTTAAAATACTATCAGTGGACTGAGCATTCACATGTACCACTCTAACCATTGGCCTTGTCATTAAAAGCATCCTGAACTATGAATTAGACATGGTACTGCAATAATAATAAACGTTTTTTTTTACACTGTCATTGAGGGATAATTAAATGGAGCATGAAAATTGGGCCTCAAGTATAATTTACTGAATGTAGATTTTATTTCTCTTTTTAATGATGTAATAGAATTGTCAGGAGAGTGGCGCTTATTTATAGGTATTTTAACTTATGTTCTGTTATCTCTGAGGGTCCTTTAGACCTGTTGTGACGTGATCACATTGTGCTGGTGCTGCCAGTTTTGCTTTATTCTCCATTTTGTACCAAAGCAATTTCAGAATACTGATCAGAATATTTCATTTAACTGCTTAGAACTATACATAGTGATCTAGATTTGAGGAAATAATTACAATTTTTTAGATTATTCAAGAACCAGCATTAGTTAACCTCTAATAAAAAAATTAAGTTTCAAAATCTACAGGGTATAATGATTACAAATTAATCTTCTGATAGAAGTACAAAATATTAATCATGTAGTTAAAATGTATTAGCCTTTTGTTTAGCTTTTTATTTGCTTACTTAAACATACATGACAGCTCCATTGTTGATCCATGAGTAGTGTTTCCTGGGATGATGAAATTCTAAATTTTTAAAAATTCCAAGGTTTGCACAGGCACAATTAGTATATAATACACGTTATTTACATGACAAATGCCCGTCCTCGTTCCCTTTCCATACTTTTAGCTTTATGCTGAACTGTGCCGTGACTCTGGCATTTTATCTGTACATGTCATGTGTGGGTGTGTGTTATTCAATCTGTGGCTGTTGAAATTATATCAGAGTTTATGAAAATTTCTCAGTGGTACCAGGGCCTGGATTTATATACATATATATATATACATATATATATTTATGCTTTAGTTTTTGTGATATGCTTATATTTTTAAGGAAGTAAGTTATCATACTTTTTTAAAAGTATTTTAAAAGTAGGAACCACAATCTTTGTATGGAGCTGCTTATTATTATATCTAGTTTCATTTGGCTCATTGAAAACTCTGCCATGAGTCTTAGTCTGTTTGTTTTTTAAAACGCTACTATTGAGTTAAATGGATTTCTTTCTCTAATTGCTAAATGTTAAGAGTTTCTCTAAGTGTTAATAGGATATTTGTATATTAGTAGTGCCTTTAGTATGAAATTAGTGTTCATTATTTGTCATTTATGATAGTCATGTGAGTTTCTATGATTTTATTTTCTATTAATTTTCCTAGATTCAGATGTTCATTGGTTCCCAACATTTCATTTTTGGGAATACATGTTTCTCTGTAGTAGGATCTGAAGTAATGAGGCTCAAGTAATTCTGAGAGTGTGTCCTTTTTGCCTCACAAAGTAATTTTTTTTTTTATGGAAATACAAAAAAGTTGAATTGTGACATAAGATTATGTTAACCTCTACTACTTTAAAGTGTATGATATTTTTCACCTTATGTATCTGTACAAACTCCAGCATTCAAGAATTGCCTCACTCATCATTTCTCTGTGACCACCCTATATGAACAGTGTACAGCCCACATCTTTATTTAAGCACTGAAGAAGGAGCACATGCCATCTTCCAAAAACTTCAAGAGAAACTTTGATAAGCATAGTGCCACTGAACCCATATAAGGAGGTTTCCTCAATATTCAAACAAAGCAAACTGACAATTCTAGATGGATAGGCAGTAAGTGTTTTCTTTTCCTTCTTCTCCTAAAGCAACTCAAGACTAAAGAGAAATTAAAATGGGAGAGAAACCCATAATGACCAGATAGTGTCATGCATTCGTCTATATTTTCTTCACCTTGTATACCTGTTCCAGAGATGGGCCTGAGAGCAATAGGTGTGCTCTCTCTGGAGAGGATGTGAGAAGCAGAGACTGTATCTCATGACAGTCTTGAGGAGTCCAGGTCCACTGATAGATTTGGGAAACTTACAGTTTTTCCTTTGTGGATGGCACAGACTCAGACTACCCCAAAATTTAGAAATATGCCCATTCAGCTGTTGAATCTGTTGTGGACTGTGTGTGGAAACCGTGGACTGTGTAGAGCACAGAAGAGCAGATTCCCCAAAATGCTTCATGTTTCCACGTCACAAGAGCAGCTGAATCTATTTAAACTTTCCTCTCCTTACTAAAACATTATTTCTAGATAACTTTGTTCAATAAAGTTTTCTTTTCTTTTTTTTTTTTTGAGCAGATTAAGTGAATTGTGAAGCTTGGTCCTTTCAGTCCTTTTTACCATTTCCAATACATTACCTGAGTCTTATCATTTTACAGATAGACTGTATTAATTGATTTAAATATCATGCAGACTCATGTCTTAAACATCTGAGACTCAGTTGCCTGAAAAATTAATTTCACCTCTGTGTGTACTTTGGTTTCAATTTAAGACTTTCCTTGCTGTTCAGAGGGATAAGTAGTTCTTTTAGAACAGGCAAACAAAAGTTTGATCTTTTTTTTCCTATTGGTGGAAGAGATGAAGAACTCTTGCGGCAGGTTTTGTTGTTTATTTCCTTTTTCATGATCAGGTACTTGCTTTGGTTTTAAACTGATATTTTTCAAACTAGTCTGGATTTGGGAGGAGGGGCAGATAGGGAGGCAGAAGGCAGAAGGAGACCCGTTAAATAAGACCTGTCCTTCACTGCATTTTCAGACTATACTCTTCCTAGCTCAAGGACATAGATGAACTGCAGTGATTTATTTACTCACTTTTAAATCATCTGTTCTATTTGTATTAGTAAATCATACATTATCATAGTGATTGTCTAGTTTAAGATAGCTAGAGTTGTCCCCCTCCCCACTAAAGTTCATTCTAATATGCTTCAGCTCATTGTCCAGAGCCTCTTTTTTTAAAAAGCTACTATGTATGATTTCCCAGCTTTCTGAGCTTGCTATATTTCTTAGAACCATCTTGCTTCCAAATCGTGTTTTTACTGGGGAGGGGAATTCATTTATTGGAGAGAAATGACAGACATTCTCTACCTCTGAAAAAAAAAAAAGAATCACAGAAGTCCCCTTATCATTTTTATAGAGAGTGACAGACCTTAAACTGGCAGTGTTCTTTCTGTACATCTTATAAGCTTTGTCAGTGAAGCAGTCTTTTGCAGGAGCTTCCTTTCCTAGTTAGGATATGTTTCAGACAGAGCTGGCTGATATTTCCCTCAGACTGCTCCATCTTCCGCCAGGGAGCAGTAAGAGACCATGACGATCAGAACGAGGACAGGCTGGAGTTTCACTGGCTTATCTCCAACACCACTGATGCGTCTTTCAGAGAGGAAAACAGGTACTAGTCTTCATAGTTAAGAATATCGGAAATCCATAGCTGCTTTTGTGTTTGTTTGTGTGTTTCAGTGAATCAACAATAATGCCTTGCTCAATCAATGCATTCAGCCATCTCAAGTGCAATTCGTGATGGAGACTCTGGTTTCCAGTAGATAAAGTTTTACATATTTAAACCTATAAAAATTAATTTTTTTCCAACAATACACCTATTGCTGTTATTTCAGCAGTTGACATACTAGTAAATTGCCAAGGCCAAATAATTAAATGCCTGTAGATGTTTTAGTGATTGGAACCAAATCTTCATACTGTTTTCTCATGAAGTAATAGGAGTGAATTTTTTGTTTGTTTTGGAACTTAGGGGCTTTTTTTACCTTAAGTCTCATATTTTCTTTTGCCTGCATCCAATTGCTTCTTTGAGTGTTTGCATCTATTTTAATATATGAGTAATAGTGTACTGTATCATCAACATGTTCAACATTTTTTTCATTTAAACAATATAAGTATAATTCATACGTATAGATCTTAATTCTTTTTTTCCCTCACAAAAGTATTTTATAAGTAACTGGAATTTTTCATTAGATCTTATACAAAGCAGTATTTTATTAAAAATTCAAAAGGGAAGACTTTTATGTGCTCATTTTTTAGCTTTTGTTTTTTTAAATATCTATACATTGTCTGCAATTAAAGTGTTTTCAACTTGCATTGGAATGGACTCCAAATGTATTTTTGTTTTAAACTGTACATTTGTAGATTTTTGGCATGAAGTTAGCCTCAAAATGTTGTGTAAAAGGATTTTAAAATATGAGTCACTGAAAGAGTTTAAACATCTATACATGTTAAATGCTATATGGATTTTAATTAAACATTTGAGAATGATTTCATAAG EMBV3_39096 CTGAGATCCAGTTACCTCGTACTTTAAGTCACCTGTTGAGTCCTACGCTCCTGGTACCTA Gene BVV0102_197193 - 0 NULL GK000008.2:98847741-99849480 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228755 1 XLOC_138582 NonCoding TCONS_00228755 XLOC_138582 NonCoding NonCoding - 8:98849165-98850726 - TSS170472 1404 2 TCONS_00228755_1 92 0.0498575498575499 2 0.101282051282051 0 0 6.59115930688522e-06 0 0 0 0 0 0 0.00313715237843995 0.00142123073796547 1.27339266533267e-05 0.00012670639950828 0.00052266585175726 0.000185205817647428 0.00041385704340857 0.002424121316353 0.000196580998973041 0 0 2.16220288679184e-06 9.51368017577161e-05 0.00162048739227939 0.000131346736728064 0 0 0 0.000930415865741189 0.000200546553308548 0.000188418241021307 0 noncoding 0 0 0 0 -0.140232434859555 0.430574221270696 0.0616818393427689 0.314257075353423 CCTTTTTTAATTGAGTTTCAGAATCTTGTCTTGATTATATGACATAATAATAGTGGCTTTCCTATTCATCTGTGTAATATTGTTTTTTCACTGTGGTGGTGACTTTTGTTGAAGGCGAAGGCCTACTGCCTTAGATAAATAAGAGAAAAGCAGAAAGCTCCTCACGGCACTGGTTCCCTAACTAGAAAATGCGAAGTCCTGACTTACATATCAGGAGGGTGAGGGTTGCCAATCAAGGACTTATCCAAGTTCAATGCAGTTTAACAATCTTGGCTTTGACGGTAAAGTGGATTAACTTTTCCATGTTATCTTCAAGCCCCAGTATCCCAAGAAATGTTTGCCATCACAACGAAAGCAACAGGGGGAGGAGGTTGCAGGCCCTGGCAGCCATTGGCCGAAGACCGGCTGCAGGATCCGCAAGGGCTTCCAAGTCTCCGAACCGAGCGGGATTCCTGGGCTTGGCATAAAGGGCTGAGTGGATTCATTCGGGGCGCGATGCATTCCAAGAATGCTTCTGTGGTTGGCAAGGAGTAGGAAAATCAAGGATAACAAATATTCTAAGGAAACCTAATAGGTACCAGGAGCGTAGGACTCAACAGGTGACTTAAAGTACGAGGTAACTGGATCTCAGTGAGGGTGAGTGCACACTGCCCAGGGCTGGGGCTTCGACCTTTCCGCATCTCCTTTTTCTCTCCTGGGCTGACTCCCGGCCGCCTTTACAGACAAGGGGGCTTGGTGCAGAGGGCGGGCGGAGCCCAAGGCGCGCCTGAATCCAAACAAAACACCTCGCAAGCCTACGTTTAGAAAGCGATACCGAACACCACACTCACGTTTAAAAAAAAAAAAAAAAAAAGGCACTGTTTGCAGAGAAGATGACGGCGAAAACATTTCCCGGCTGGAAAATTACTGATCACAAACTAAGGGGGAGTGGGGGTGGGGAGGCCGAGTTATAAGACTGAAATAACGATTGCCGTTTCCTCTTCTCTTCCTGGTGGGCAGGGACGCCTGCTGCGAGCTCCGTGGGCCTTTTTCCAGTACCTGGGTCCCATCGCTTAGTTCTACTTTCTGGCACGGGGCCACTTTCCAGCTGAGACCCTTTGGGTGGGTTTGACCGCTCTAGAGCCTAAGCCAAGGGAACCAGTTGCCGTTTGACCTTTACCTCGCCACTTCACCTCTTTATGACTCAGTTTTCTCATCCATAAAGTGGAGAGTTGCGTGCTTTGCAAAGTGCTTTGAGATTCCCGGTTGAAAGGTGTCCCCGCGCCTCACGCCCCTCCCTTCTCTTCCCACCTCACATAGCGAAATTTCTTTCAGTCCCTTCCTCGCTCCTTCAGCTATCAAAACCGTAGCTCCATTTCCCACCCCGGCCTCTTTCCGCCCCTTTAAGGAGAGCACCCCTCCCGC TCONS_00228753 s 5' 812 TCONS_00228753 s 5' 1838 EMBV3_22356 CCCCTTCAACTTATAACCGGTAAAACACCCACAGCTCAACAAGGTGCCTCTGCCAAACAC Gene BVT0102_104339 - 1 EMBV3_22069 GK000023.2:29123281-29143550 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24474 ATGGAGGTTCCTGCTCGCCGCACCTTGTCACCACGCCACGCAAAACTGAGGAAATCAAGA Gene GeneID:100336389|LOC100336389:XM_002687983:74_cdna Constitutive 0 NULL GeneID:100336389 5 GENE LOC100336389 NULL ribosomal protein L38-like EMBV3_26754 ACTCGGACCTTACACCCTACTTTCCTTTGAATCTGTCAAAGGGCAGACGACTTCACAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01323 TTCTCGCTGCGCGCCTCTCGCCCCTCTGCGTTTGTATTTATTCATATTTATCTGGCCCCC Gene GeneID:100337469|LOC100337469:XM_002689427:41_cdna Constitutive 0 NULL GeneID:100337469 7 GENE LOC100337469 NULL ephrin-A5-like EMBV3_18750 ACGATGGCAACGATGTGCATCAAAAGGGGAGAGGCGAGGTGGAGAGCAAAACCTCCAAAA Gene GeneID:617773|C26H10orf120:NM_001076476:8_cdna Constitutive 0 NULL GeneID:617773 26 GENE C26H10orf120 C10orf120 MGC133749 chromosome 10 open reading frame 120 ortholog EMBV3_20787 TCTAGCCACAAACCCCAAATACAACCAAGTGGGCAAGGGGAAAAGCTCCTAGAATGTGGC Gene GeneID:508124|LOC508124:XR_084703:102_cdna Constitutive 0 NULL GeneID:508124 7 PSEUDO LOC508124 NULL similar to Homer, neuronal immediate early gene, 3 EMBV3_31170 CATGTCTTCTCTCAGAATGGGAATGTATGTGTGCTTCCCAATGTTTACTTTTATGTCTGG Gene BVT0102_084690 + 0 NULL GK000026.2:42633526-42658570 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151077 TCONS_00151078 TCONS_00151084 TCONS_00151086 TCONS_00151081 TCONS_00151085 TCONS_00151088 TCONS_00151082 TCONS_00151075 TCONS_00151076 TCONS_00151087 TCONS_00151080 TCONS_00151079 1 XLOC_092018 Coding TCONS_00151088 XLOC_092018 Coding Coding PLEKHA1 26:42598759-42635556 j TSS113020 3488 1 TCONS_00151088_2 404 12 0.905533210131536 0.00136091105558024 0.00692498322522393 0.00215968657591767 0.00281222058948793 0.00579477610558214 0.00181552855702812 0.00575065452590924 0.00727802713876589 0.00387941746256236 0.000155216730590529 0.000278707863769609 1.53167489375273e-13 0.00111009642755516 0.00150966083609741 0.000345949942483411 0.00101379315012725 0.000235588895283091 0.000939737313314566 0.00191512795813305 0.00374070272889325 1.36475882058082e-08 0.000525390501752984 0.000488918398515124 1.51766945406263e-23 0.00179794980977 0.00146284295761526 0.00216101443233466 4.74758834499553e-44 0.000151962143328824 0.0015487433782295 XM_005225799.1 PLEKHA1 PREDICTED: Bos taurus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 (PLEKHA1), 0.0 6080 99.91 0.968463302752294 NM_001001974.2 PLEKHA1 Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 (PLEKHA1), transcript 0.0 2756 85.25 0.694094036697248 TCONS_00151088_2 sp|Q9HB21|PKHA1_HUMAN PKHA1_HUMAN Pleckstrin homology domain-containing family A member 1; 0.0 786 93.56 0.997524752475248 5 coding 1 1 1 1 -0.0348544906380052 0.818587740301799 -0.0254471940543108 0.603274466841398 GGTGCCTACTCTTGGGGACAAAATGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGAAGTTTCTTCGGAGGTACTTCATACTGGATACCAGAGAAGATAGTTTTGTATGGTACATGGATAATCCACAGAACCTACCTTCTGGATCATCACGTGTTGGCGCCATTAAACTTACCTACATTTCAAAGGTTAGCGATGCAACTAAACTAAGGCCAAAGGCTGAGTTCTGTTTTGTTATGAATGCAGGGATGAGGAAATATTTCCTACAAGCCAATGATCAGCAGGACCTAGTAGAATGGGTGAATGTGTTGAACAAAGCTATTAAAATTACAGTCCCAAAGCCATTAGACTCACAGCCTCATCCTGATAACCCAAGTCGCCAAGGCGAATGTGGAAAGAAGCAGGTCTCTTACAGAACTGACATTGTTGGTGGTGTGCCCATCATTACCCCAACTCAGAAAGAAGAAGTAAATGAATGTGGTGAAGCTATTGACAGAAATAATTTGAAGCGGTCACAAAGCCATCTTCCTTACTTCACTCCTAAACCACCTTCAGATAGTGCAGTTATCAAAGCTGGGTATTGTGTAAAACAAGGAGCAGTGATGAAAAACTGGAAGAGAAGATATTTTCAATTGGATGAAAACACAATAGGCTACTTCAAATCTGAACTGGAAAAGGAACCTCTCCGCGTAATACCACTTAAGGAGGTTCATAAAGTCCAGGAATGTAAGCAAAGTGACATAATGATGAGAGACAACCTCTTTGAAATTGTAACATCATCTCGAACTTTCTATGTGCAGGCTGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGCAGTCTCGGGTGCCATTGTAGCTCAGCGGGGACCCGGCAGATCAGCGTCTTCTGAGCATTCCAACAGTCCTTCCGAGCCCAAACACGCTCTCCTCTCTGCCAGTGCCGCAGCAGCCACCCCACATTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAAGCTTTCCCATGGAGAAGCGAGGATTTTATGAATCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACCGAACAAGCTCTGCTAAAACCTCGAAGTAAAAATGGCCCTCAGGAACAAGATTGTGACCCCGTGGACTTGGATGACGCAAGCCTTCCGGTCAGTGACGTGTGAGGTGGAAGCTCGTGGAGCCTGACCCGCCTCATCAGCCCTCAGTGTCCTTTTCACAAGGCTTCTCGCCAAAGATGATAAAGGGGAAGTGGGTTTTAATGCGTAGAATATCCTGCCTCGTCGCTGTCTTCTTTATAAGCTGGTAAGCCAGGAAGCTAGCAAGTGGCCAAACTAAATGTAATTTCTTTAAAAGAAAGAAAAAGAAAGAAAAATGCCCTGTTAGTATCAACTGTCTGAAGCTTTGTTCTCATTGGGATGATAACAGTGTGTGTGTGTGTGTGAGAGAGACACTTTTTCCTAGTGAATTTGACAGTTTAGCCGCTTCACAATTTAAAACATGAAAAATGCTTATAATTACTTTGGTTGTTTTAAAAATGCTACTGTGACTTCCTATTAGATGTTCAGTCTCTACACATTCTTACTGGTTAATATTATTGACTGAAATATTGCCAGACAAAGATGTCTAAACTCGTGATGTCTGTGGTGCTGTAAAATTTATACTACAGTGTGGACAGTTTTGAAACGATAACCATTTTTGTTGCTCTGGATCTCAAGGTGAGCAGTGCATTTTGCATAGAGAGGGTATTATTGAACTGTTAGTGAGGGTTGTGGGTTGTACTGTTGGAGAAAAGGGGAGAGTTAGAATTCAGATAGGTAGATCTTGGACATTTGTTTGTAAAATCTTAGTCAAGATGTGCAGCACAGTCATTGCTTTTTATTCAGTGAAAATTATTTGGTATGAAATTTCTTGGAGGCCTGATTTTCTTGTCAAAATGTTGTAAATAGTTCTTCTATATTTGAATCAGTGGAAGACCTCGTTTATATGTAAAGATACTGCCCTCAGTCATGTGGTTGTAGCCTCTGCTTTTTGTCACTAGTAACCTGTATTCAAGTGTTCATCTTGTTTAGGAATGTTTTGAGATTAATGTGCGTAAAAGTCCTATGTGATTGGTTTTAAACAATTGGGATAAAATTAATTTTTAGTAGCATAAGTTAATGTGCTAAATAGCATACCATTTTGTGTTAGAGATACCAGAATGTTGTTATTCTACTGTCTGTGCAATACATGTTTTAAGCACAAATTTGAGTATACATTTAATCATGGGGATGTCAAAAACATAAGCTCCTCTCTAAAAAACATCGTTAGTTTCAGGTGTTGAATAACAGACCAGTTTGACCAAGTACTGTTTCTACGGTTCAGTCTTAAACATTCGCTTTAAGAAAATAGTCTTGAATTTCATATGCTGCTATTTTTTATGATATTTTGCCATATTACAGTACTGTTTTGTTTTGAATTCATACATGTCGCTGTTTCTCCTTTTCATTTTCTCAGAAGACTTTTTGTTTGAGAGCGAGAAAGTGGGAGTGGATTTCTTAAATCAGAGTGTGGTCCAGAGGTTACTATCTGTTACACTAGAATTATCATAGCATCAGTTTAAAAATCCAAATGCATAAAGAATGCACCACTCAACATTTTTATTCATAAGCTATTATTTTTGAAACTTATATTTAGATTTTTCTTCTTTTTTTGCAGCTACATTTGAAAATGGTAGAATGAAAAGGTGTTAAGTTGTTATTTTCTCTGCAGATGCATCCATTTCGTCGGCTCTTTTAGAAAGCTCTTTTCTCATGAGCACGCCTAAGAAGTCTTATGCAGACAGTGGGCGATATTCAGGAGCCTGATGCTGTTTTCTTTGGTACAGCTTCCACACTGCATGTTCATTTTAATATTTTGGTATTGGTAATTTGATATATTTCATAGTGGCAAAATATTAGCTCTATTTTGGGACTTTTTATAGAACTACCCTTGCATTCAGTAGCATAGGAAAATGTTCTTGTGATTGTCAGGGTCTTCTAATATTTATCTCAATACTTTTATAATTCTATGAAAATTATTTAATTATTTTAAAACATATACTTTTCTTGTAAATATGTCACATCCGAATTGTCAAAGAATTACTTTGAATACCTTAATATTTGCTGCATTTTTTTCTGTATATGTAACATGTCTTCTCTCAGAATGGGAATGTATGTGTGCTTCCCAATGTTTACTTTTATGTCTGGTATGGTATCTTTATACGTCAAACTGGTTAAACACTGTAATGCTTCAAAATAAACTCAGAATTAATTCTAACTTATTTCTCAGGACTGATTCAGTTCTTGTGTAAACAATGAAATAAAATGAATACAAAATATGTTTGGTTAATTGACGTGAATTTACATGTTTAAGAAC EMBV3_42544 GGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAA Gene BVV0102_427146 + 0 NULL GK000008.2:23090001-23102226 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00054120 TCONS_00192189 TCONS_00022348 TCONS_00238722 TCONS_00167945 TCONS_00192192 TCONS_00230914 TCONS_00184695 TCONS_00192191 TCONS_00048510 TCONS_00037838 TCONS_00184696 TCONS_00184697 TCONS_00192190 TCONS_00220090 TCONS_00034471 TCONS_00000529 TCONS_00179493 14 XLOC_006328 XLOC_031929 XLOC_117131 XLOC_013018 XLOC_145389 XLOC_102781 XLOC_140404 XLOC_111408 XLOC_028642 XLOC_021667 XLOC_133407 XLOC_020687 XLOC_000141 XLOC_109265 Coding TCONS_00000529 XLOC_000141 Coding Coding - 1:45088092-45096984 - TSS270 8451 4 TCONS_00000529_10 143 0.745473908413206 2 0.0497131931166348 2.01012307707297e-05 1.49871009079085e-05 1.36625311347943e-05 4.53987540290904e-06 1.24531364209072e-05 5.00814608360259e-06 8.46442312822931e-06 1.24185267133133e-05 4.13121620626016e-05 0.001823279532659 0.000814409045036406 0.000443886703423644 0.000426802436486759 0.000631969837416122 0.000420788496196143 0.0164351832051245 0.0118459757916584 0.0133511864103435 1.34853947675417e-05 9.74488686084332e-06 4.71379726774531e-06 0.0113995265993752 0.0116294525732748 0.0115848317310599 2.19528616543606e-05 1.81962347473363e-05 1.11450810621553e-05 0.00508280936174051 0.0025318551055437 0.00742716955264329 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1225 90.86 0.102828067684298 TCONS_00000529_10 sp|Q08DI6|RNF11_BOVIN RNF11_BOVIN RING finger protein 11; 6e-28 104 42.47 0.895104895104895 0 noncoding 1 1 1 1 0.0450297516627036 0.769473730118356 0.00899590186576138 0.845664037517258 TATTTCGAGAAACTGATCCCAATTCTTTATTTTCCATGGTCTACTTTTATACACTGAGATGTTATGCAAAAGTCACATGGGGTCAGCAGTCCTGACTTTTATCAAAGTCAGGTGCTTCATACAAATGTATACAGAGGTCTTAGGGGTATTACATCATCTTCTGGCCAGGGGGCCTGCTGACAATTTATGACCCTCTCCTTATGACAGCGGTCAGTCAACCAGGACACTTATTTCTCCAGGGGTGATTATTCTTAAAAAAGACTCCACCTTCCGAAGGTACCAGATAAAGTTACATTCCTATAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAACCTAAAGTCTAACGTGATGGTCCAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTGGCTCAACAAATGAAAAACCCTTCACCAATACAATTTCTAATCAGCCCACTACTTATACTAATGGTTTTCTAACTTTTCTAAGGAATCTGTTTTTAGAAGGTTTAAAGCATCTCGTGCCTCTCACGGTTGGGAGGCTGTGAGCAATCACTTGTGGCCGGACAAGCCTGTCAGGCAGGCTAGAGAACCTTCAAAGGAGTTTGTAGGTTAAAACACTCTTGTCATGCCCAGGAGTTTTTATTAACTGGAGCTGTAAGTTAATTCCTTCTCCGAAAGAGGTGGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAGAGCACAAAGTAGTAAAGTAGGCAGGCTCTGGTTATGGGGGTAGATGCTCGAGGATTTCCAGGGGGACTCCTGAGACTTGATCCCGCCTTTGCGTATGTCGAGCCTCCTTCCTCATGACCTTTGCCATGGGTGGAGGTCCTCACACCGGCTCCCAACAAGAGTGAAATAGTTGGCTTAAAGCTCAACATTCAGAAAATGAAGATCATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAACTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCTGTCTAGTTAAGGCTATGGTTTTTCCAATGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCATTTGACTGATGCTTTTGAACTATGGTATTGGAGAAGACTCTTGAGAGTCCCTTGGACTGTGAGGAGATCCAATTGGAAGGATCTATGTTGGAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGCGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGAAGGGGACAACAGAGGATGAGATGATTGGATGGCATCACTGACTCAGTGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATAGACAGGGAAATCTGGCATGCTGGAGTGAGGTTGGACACGACTGAGCAACTGAACTGAACTGAAAATGAAAAGATCTAGCTTGATTTTTCTTCAAAGGTAATTTATGATTTATTATTTAACCTGTGTCCTATGATTGCCAAATTTTTTAATATTATTGGAAAATAAATGAGTTGAAAAATGACATTACAGGAAGATCAATTATACAACTAGATAATTTATTTCAGGATTCTGCAGTATTTTGAAGCTTGGAGAATATTCTGGTCCTTAGGTACAGCAGCTAAGTGTGATCTGAAGAGACCCACGCCGGATGGTTTTCTCAGACTTAGAGTACGACATGGGGTGCTCCAGAGCCCTGAAAACTGTATCTTTTTACAGCGCCAGCATTTCTCCTTTTGCCATCCTGGCTTGAGAGGATGCTGGTAGCTTAGGTGTTGTCTTGGGAATGAGGAGTAGGATGGTTCTGCTGCTAAGAACTAGTAACAGTCTCTAGCTGCATCAGGACAACACAACCTCACAAAGCAGTGAGGCCACTGGCCACTCACAAAACAGAGATGGCCACTCTGTCTGGCAGACTGAAGGAGCAGAATTCCAGGAAATGCCAGTTTTCCATAATTGTATCATTGCCATGTTCTGTGCCTGGGGGACATACTTTATTAAAGAGGTTGGGTCGATTAGATTTGTTCTGACTGGTATCCAGGTGGGTTACTCAGGTGGCTGCCCTGGATTACCTGCATGATGAGATTATGTGACCCAAGGGGTTCCATACCTGATGAGGTTATATCAATGATGGGGTTAAGCTGCATATAAGAGCTCACCATCTGAAAGGGGCTTAGTTTCTAGAGAGACACTCCGTGGTGACAGTGACCCCAGCAGAGAACTGGCTTTGTCATCTTCTCTATAGATTTGGATCCTGACCTGGGAACCAGGAGGTGTCCTGCAGAGCCGGCTGTCAGCAGCGGACAGGGACCTCACCCCCAGGCCTGAAAGATGGGGAACTGCATCGGCTCCAGCACCGGGGACGACCGGCCGGTCGCTCGGTTTCCGGCCCCCCTCCGAGAGCGCAGAGGCGGAGACGGCCCGGGGGCGGGGGGACCGCGGGGTCCGGAGCGGCGCGGGGCGGGGGCAGCCCCGCCGGGAGCGCCGCTGACCTTCCGTCGAAGGATCCGCCTCATTCAGAGCCCACCTCGAGACGTGTACGGAAGGGATGGATGCGAGACGAAGACCACCGAGTGCGCGGTCTGTCTGATGGACTTGGTGCCCGGGGACCTCATCCGGCCTCTGCCCTGCAAGCATGTGTATCACCTGGACTGCATCAACCAGTGGCTGACCCGGTCCTTCACCTGCCCGCTCTGCCGGGGGCCCGCGGACGCCGCGCAGCCTTTGTTTGAGGACGCTCTTGAGCCCAGACCCCTGGTGTGATTGCAAGGGACCCATCATTTTTACTGATTTCCATGTTCCGTACTGTGCCCAGATAGCCAGGGGTTAGGAATTTAAATCGTGCACAAAGGTTTATTAAAAGTTCCTGGAATGTGGCAGATGTCCGGGAACCGTTTCTAATGTTTTAGAAAGATAGGGAGAAATAGCGGGTGAACCTTGACCAAGTGCTGAGAGGTATAATGACGTCTTAGCATTGTCCTCTTGCTAGAACTGTGCACCCTGTTTCAGCAGCTCTACGTGTTGCATTGCATCTGTTGAACGTCAGGGAAAGATAGTGGTTACTCTTCCTAAATGAAATCAGATTCTTCTCCCCCATCCAACTTAAAAGTTGCTGGCATTTAGGCCACAGTTTTATGAAAAGTTACAATTTATACAACTGAACTAAAATAAAATCAAAGTATGTATGAGTGAATACCTGAAGAATGTTATTCTCAATTGAGCCTTCTAAATGGTCTTATCCGTTTGTTCTCCATCATTTTGAGACCCTTAACCCTTTCCTCTTATAAATCCAAACCAGGTGAACAAAGTGTTCCAGGGAAGAACAGTCCTGAGCAGGTTTATTATCTGTGTAATCAGGGCGTGTCCAGGCACTTTAGCTGTGTTTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTATCAGGTTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTGCATTGCCGGTTCCTTCTCCGGGGGATCTTCCTGACCCAGAAATCAAACCCGGGTCTCTCACATTGCAGGCAGACGCTTTACCATCTGAGCCACCAGGGAAGCCCAAGGGAAGATAGTTCTCCATTAAACTGGAAGTCAGCCAGCTTCACTCCAGTTCCACTTTACAAGCCTTATCAATTTACATTTTCCTACCAAAGCAAATACTTAAAGTTTGAACTTTCAAAATTTTCTACTTTTTATTTGTCTTTATCTCTTATGGTTGTGAAGAGCTAATTCATTGGAGAAGACCCTGATGCTGGGAAAGATTGAGAGCAAGAGGAGAAGGGGGTGACAGAGGATGAGATGGTTGTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTATACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGATAAGGGGCGCTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAATCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACGGGAAGCCTTCCACTGACGAAGAGGGGAGCGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCCAATGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCACTGCCCTGTGCTTAACTCTAGAGCTCGGGTCAGGGCCACCAGCTCCGCTAACTGAGCACTAGTTTCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGATAGTGGCAGGATTTAAATTTCCACAAACTTTAAGTTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAATGCCGTTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGACCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCGATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATACGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAATTTTGTAGATCCCGTGACAAACTTTGTTCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAATCCTTTCTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGTTCCACATTCATGAAAACAGATGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTCTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCTGGGGGCGGCTTAGATCCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGATTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCTTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTGCCTAAGTCCCTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGTGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATCTCTTACCCCTTGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCAGGTACGGGGGCAAAGTAAGAGGATAGGAGGGAGCTGAAGAT TCONS_00000526 s 3' 6565 TCONS_00000526 s 3' 6565 EMBV3_21447 GACAACCTAACGTAAACCGAATGTACTGAGCAGAAGTCAGCAGTCAAGGCTAAGGTGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36314 ACCTACTTTTCTCTGGGCTTCTATTTTGACCACAACAATGTGGCTCTGGAGGGTGTGGGC Gene GeneID:615291|LOC615291:XR_084139:13_cdna Constitutive 0 NULL GeneID:615291 X PSEUDO LOC615291 NULL similar to ferritin L subunit EMBV3_23753 GAAGGCAGCTTTGGCTTCAAGTCCTTCGTGTCTGTTGTTCTCGTCTTTTTAAACCAGGGA Gene GeneID:533574|ZFAND1:XM_002692835:198_cdna UTR3_Alt 6 NULL GeneID:533574 14 GENE ZFAND1 NULL zinc finger, AN1-type domain 1 EMBV3_04163 ACGGGTAGCGGAGGCCCTAGGGAATGTTCATTGATGGGAGCTCTCTCAGGATCAATGGAA Gene BVV0102_315314 + 0 NULL GK000019.2:27298440-27331076 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096079 TCONS_00096081 TCONS_00096078 TCONS_00096080 1 XLOC_057873 NonCoding TCONS_00096081 XLOC_057873 NonCoding NonCoding PELP1 19:27300106-27322727 x TSS71471 1544 1 TCONS_00096081_4 145 0.272668393782383 3 0.931874447391689 6.44855096543027e-36 0.00136015757290458 0.000207868133241704 0 1.04285265889114e-28 2.37259084668848e-18 2.4055711854094e-05 0.000119604305100373 9.15985562094743e-06 3.82734535043341e-23 0 0 3.08149844248803e-05 1.53789707984341e-101 1.66157641630526e-23 1.76032673667989e-56 0 2.72105001082992e-61 0.000728229898260872 0.000535838915914446 9.87193503490253e-06 0 0 5.43742102829584e-13 3.23250845459999e-17 0.000251655095208127 0.000272936766522656 1.15724011252447e-25 0 2.18603881689363e-48 XM_001254201.5 PELP1 PREDICTED: Bos taurus proline, glutamate and leucine rich protein 1 (PELP1), mRNA. 5e-77 293 100.00 0.104274611398964 NM_001278241.1 PELP1 Homo sapiens proline, glutamate and leucine rich protein 1 (PELP1), 4e-53 214 88.96 0.104922279792746 0 noncoding 0 0 1 1 -0.0768407056304171 0.500218343240918 -0.0175328052034857 0.846234473400461 GTTTTACAATGTTGTGTTAGTTTCTGCTGTACAGCAAGGTGAAGCAGCTATACATATACTTATATCCCCTCTTTTATGGATTTCCTTTCCATTTAGGTCACCAAAGAGCTTTGACTAGAGTTCCCTGAGCTATACAGTAGGCTTGCTTTGGTTCTGCAAAAACTTGCGTGTCCTCCAAGCATCACGTAGCCTAAACAATAAAGTGTTTGCCCAAGTTGTTTTTCAGAAACTTGGAGTCAGCTGTTTCCAGTTCAAGCTAGAGCTGGTAACGACTGGTAGGAAGTACCTACAGACCAACTGGGCACATGCGCATATCCAGCAACCTTTTGAGGTCAGAAGGCCCAGAGCTTCAGCCTCAGAACATGCTACGCTGCCACTCTCTGGAGCTGCTGCCACTCTTGGGACATGCATCCCATGAAGAAGCCTGAGGCTTTCTATCCTGTTCCATTGATCCTGAGAGAGCTCCCATCAATGAACATTCCCTAGGGCCTCCGCTACCCGTGTCCTTGTTCCCCCAGTGAGCCACAGCCGACCCCCATCTCCCCAGGAGATCCTCCAAGACCCACAGGACACACGAGCACGCGCTGTGGACAGAGGATGTGCAAAGACGACGCCTGAGACCTGGAGGGGCGGGTCAACACCAGCACCCCGTCCAACAGCAGGACCCAAGGCCCCACCTGCAGCCCTGGGGGAGTGCAGCCCCTCGGCAGGCTCTTAGCCGGCTCTGCTTGTTTCCTACTCCCTCCACCAGGACACCCGGCCCCTCCAAGTGTCTCCAGACCCTCCCAGCCCCAAGGTGCAGGGCACAGGCCTCACCCACCTCTCAGCGCAGCTGCACACACATCGCTGTTGGCATTGCTGTCCCCTTTCCGGTGGCTGGGCGGAGCGATGGCCTCCCCCACATCCAGCTTTAGCTTCTTGGGGGCACTGGGCTTCCCGGTCTGCAAACCTGCATCAGGGCTCCCCCGGGGGCTGCGCAGCTGGCGGGGGAGGGAACACGGATCATACACCAGCCAGCAGGAAGGCAGGGTGGTCGGGAGGCTGGATCGGGTGAGGACCAGGGGTGCTGGGAGGCCCCTCTCACCCTGAGGGCATCCGCCGGCGGGGAGATGTCGCTGAGCAGGTGGGAGAGCAGGGCCTCCCCCGAGGCGCCCCCCTGCAGCACCCCCGCCGAGGCCCCGCACACTTGCACCCAGAGCTCCAGGACGGCGTACACCTTGGTCCGCACGGTGCTGCAGGGAGCGCAGAGGGTGCCTGTGAGAGGGAGGCCATGTCCCCACTCCCAGCCTGGCAGCACCGAGTCACCACCACCACCCCCTCCTTTTTACTCCCTTCCTGGACGGTCACCTGTAGGGCCTCTCCTGGCCCGGTCCGAGGTTCTCCCTCCCAATGCTCCAGGCATTGAGGACCTGGGGAAGCAGGCGGCTGATCAGGGCCCCGAAGCGCAAGAGCCGTGCTCCACACCTGGGGGCGAAGACAGAATGGTGACCCCTGCTCCCAGCACATCCCAAACCCTGCACCACTTCCTGTCACCCACTCACGCG TCONS_00092986 r 5' 0 TCONS_00092986 r 5' 0 EMBV3_31987 TGAGAAGTAGTGGTTGGGGCATTTTTAAGATGGCTGGCTACACTTGTTTTCCTTCATTAT Gene GeneID:538649|FAM60A:NM_001076116:20_cdna Constitutive 2 NULL GeneID:538649 5 GENE FAM60A NULL family with sequence similarity 60, member A EMBV3_42105 TCAGTAACCAACCCCTGTCATTCAAATTATGCACCGGACCCTCCTGGCATCTCGGTGCTA Gene BVV0102_164816 + 0 NULL GK000013.2:41053450-41104462 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07915 CCGAGATGGCACTGGTGTCGTGGAGTTTGTACGGAAAGAAGATATGACCTATGCAGTTCG Gene GeneID:615796|SFRS1:NM_001076394:48_cdna UTR3_Alt 2 NULL GeneID:615796 19 GENE SFRS1 MGC139904 splicing factor, arginine/serine-rich 1 EMBV3_16460 CTCAGCAGACTCCTGTGGGTAATGCTGCTGTGTCCTCAGTTGACTCATTCACTCAGTTCA Gene GeneID:504867|C29H11orf73:NM_001034226:11_cdna Constitutive 2 NULL GeneID:504867 29 GENE C29H11orf73 C11orf73 MGC128621 chromosome 11 open reading frame 73 ortholog EMBV3_00087 CAGCCTTCCTCTGCTATCCAGTCCCTATCTATTTCATCACACAACTCCCCTTTTGTGGCC Gene GeneID:780976|LOC780976:XM_002690662:224_cdna Constitutive 0 NULL GeneID:780976 10 GENE LOC780976 NULL hypothetical LOC780976 EMBV3_10797 CTAGGCGATGCCAAGAAGACGTGTGATGCTCTGCAGGCGAAAGTTAGAGAATCCTACCAG Gene GeneID:280878|NNT:NM_173943:2_cdna Constitutive 0 NULL GeneID:280878 20 GENE NNT NULL nicotinamide nucleotide transhydrogenase EMBV3_28805 CCCTACCGGCACATCTACATCCTTGTCAACAAAATGGAAGTAAGCTGCGATGCAAGGCTG Gene GeneID:520085|LOC520085:XM_002700276:14_cdna Constitutive 0 NULL GeneID:520085 X GENE LOC520085 NULL similar to melanoma antigen EMBV3_12909 AGCCATGCTTGGTCTTTCTTCCACCAACTGGGGCTTTACCTCCAACCCTGATTCTGGAAA Gene GeneID:616149|LOC616149:XM_002686112:126_cdna Constitutive 0 NULL GeneID:616149 3 GENE LOC616149 NULL similar to Neuroblastoma breakpoint family member 6 EMBV3_22118 AGCGCCGCGTCTTCCTGCTTCCCTACTCGGACAGCGGTGATCAGTTATGACTATCTTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30636 CACGTGTATTTGTCTCTTAAGCGCCTTGCCTGCTGGTTGGGTGGGAAGGGTTCGTTGTTT Gene GeneID:505059|WTIP:XM_002695003:221_cdna Constitutive 0 NULL GeneID:505059 18 GENE WTIP NULL Wilms tumor 1 interacting protein EMBV3_02621 ACGCACCTTGCTCCTCTCCGACGTGGCAAAACTATCCAACCCTACAGAGACCGAAGTGAA Gene GeneID:100294942|LOC100294942:XM_002689782:5_cdna Constitutive 0 NULL GeneID:100294942 8 GENE LOC100294942 NULL similar to S100 calcium binding protein A11 EMBV3_22054 GAGGCCACCCAGCCGGGATCTTACTTTAGGTGATGATGAAGGAATCCAAACTGACGAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17136 AGGTTCCAGGTGTGGGACTACGAGGAAGCAGAAGTGGAGGCCCTGCTAGATCGGTACTTT Gene GeneID:613560|LOC613560:XR_084039:462_cdna Constitutive 0 NULL GeneID:613560 23 PSEUDO LOC613560 NULL similar to putative c-Myc-responsive EMBV3_39230 CTTGAAACCTTTTATTCCGGGCGTCTTGGTAGTTTCTGGTGGGATTAAGCGGGTGAGAGG Gene GeneID:533197|HNRNPUL1:NM_001083466:673_cdna Constitutive 0 NULL GeneID:533197 18 GENE HNRNPUL1 HNRPUL1 MGC138009 heterogeneous nuclear ribonucleoprotein U-like 1 EMBV3_32960 ACATGCATCCGCAGCAAAGTGGCCAATCTAAAGAACCCCCGCAATTCTCACTTACAGCAG Gene GeneID:504389|LOC504389:NM_001024472:8_cdna Constitutive 0 NULL GeneID:504389 X GENE LOC504389 MGC17403 TFIIS central domain-containing protein 1 EMBV3_27216 GAGAGTCCAGTGATACAATTTTTCCCCCCACTGCAGTCCTCGCTGTGGTAATTTCATATC Gene GeneID:509643|PROSC:NM_001034357:50_cdna Constitutive 0 NULL GeneID:509643 27 GENE PROSC MGC127452 proline synthetase co-transcribed homolog (bacterial) EMBV3_17459 TTATTGTTAATATTCTACTCCACCAATAAAGTTGAGTGGGATACGTGACTGTGGATTGGG Gene BVT0102_286617 + 0 NULL GK000026.2:16989931-17000252 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09102 TGGAGTTCCAGGCATTGGAGCAACCCAAGGATTCAGGACTGGTTTTACAAATATCCCGAG Gene GeneID:518111|SLC30A6:NM_001075766:20_cdna Constitutive 2 NULL GeneID:518111 11 GENE SLC30A6 MGC143281 solute carrier family 30 (zinc transporter), member 6 EMBV3_09426 ATTCAGAAGTGAAATATCTGAAGGTCCCAGGAGAGTCTGGCCGCCGCTCCCACTGCCGAT Gene BVV0102_456457 - 1 EMBV3_32216 GK000017.2:54581332-54584644 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075455 1 XLOC_046591 NonCoding TCONS_00075455 XLOC_046591 NonCoding NonCoding - 17:54581645-54593178 - TSS56895 544 1 TCONS_00075455_1 113 4 0.953173777315297 0.0103125468671047 0.0127021402783487 0.0109542644921779 0.0051666054847271 0.00793981737905608 0.00353986703678205 0.00591581571470324 0.00830873336194221 0.0134938981430678 0.000771400934770378 8.61676650375303e-07 0.00106232600274123 0.00126321555062646 0.00136190495568238 0.00189843859728496 0.00320431643053172 5.13282404122199e-06 0.00276735919851982 0.00694038091443325 0.00978965046554694 0.00162110357437043 0.00165052241312642 0.000489015995242873 0.0034360517523906 0.0113160541863436 0.011500665488063 0.00693434979997773 4.40384956001899e-06 0.00066034667646336 0.000925779811873235 XM_005217865.1 MPHOSPH9 PREDICTED: Bos taurus M-phase phosphoprotein 9 (MPHOSPH9), 0.0 982 100.00 0.998161764705882 NM_022782.3 MPHOSPH9 Homo sapiens M-phase phosphoprotein 9 (MPHOSPH9), transcript 0.0 728 89.74 0.998161764705882 0 noncoding 0 0 0 0 0.0766815458323286 0.540576554441063 0.0251409032936949 0.664097600148209 GAGAGGCCGAGCGCCCGACCCTGACATCGGCAGTGGGAGCGGCGGCCAGACTCTCCTGGGACCTTCAGATATTTCACTTCTGAATGTCAGCAACTGAAAATGCCTGTAGACGATGAAGCATCTGAAGATGACTCAGATTCAGTTTCTTCAAACAGTGCAAGAACCTGAATTTTCAAATGAGAGCGTGTAACAATTTCTGTACACTATGGAAGATTTTGACTTGGGGAAGCCCTCACAGAAAGCTTCATCTTCTATAGAATCTGATATAAAAAATTCTCCTCATTCTCTTGGACTGAACTTAAATACTAATAGAAGTAGTCCCCACCTTAGTACAAATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTCCTCACCTCTTTAATGCAAGAGCTACAAAACAGTGGAAAGACTGATTCGGAACTTTGGAAAAACTGTGAGACCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACAGTGCCAAGAGCAGATAGTGGCTCAGCAGGAGCAATTTCAC TCONS_00077325 r 5' 192 TCONS_00077325 r 5' 192 EMBV3_15927 GGCCAGCCGTTTCATCGGATCCTTGATGGTAATCCTGAAATCAGACATGTTCCTGTAGAA Gene GeneID:512631|SRPK1:XM_002697203:86_cdna UTR3_Alt 2 NULL GeneID:512631 23 GENE SRPK1 NULL SFRS protein kinase 1 EMBV3_30146 CCCAGAAACCTTAGCTAAAAATATTGAACCAAATTAGAATTCTTCCCAAGGTGTCTGTAG Gene BVV0102_258820 + 0 NULL GK000003.2:77113853-77153675 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170314 TCONS_00170313 TCONS_00170315 TCONS_00170319 TCONS_00170316 TCONS_00170318 TCONS_00170312 TCONS_00170321 TCONS_00170311 TCONS_00170317 1 XLOC_103557 Coding TCONS_00170321 XLOC_103557 Coding Coding DEPDC1 3:77093221-77116135 j TSS127288 5729 1 TCONS_00170321_1 600 0.119741665212079 11 0.750447344302361 3.08596639780085e-05 6.36627052970279e-05 1.1423279053103e-05 3.22705846808981e-06 9.32706385821055e-06 2.98040709250406e-185 7.43083740761685e-05 4.16595861224163e-05 0.000132594755936665 1.25443560908625e-45 2.41952271540845e-21 1.76194908857081e-219 1.28082046254306e-06 3.11833664151999e-123 4.31672903809376e-05 0.000189399416419406 7.104333474783e-53 0.00131782485249249 4.8566670575083e-06 1.22283385412868e-05 0.000104812304695519 0.000327708812520764 5.88690448884821e-05 0.000364252696073232 0.000231823546793583 6.11331580515006e-240 5.71184983954066e-06 1.64920113547429e-42 1.41921566743473e-75 1.54271211708145e-05 XM_002686319.3 DEPDC1 PREDICTED: Bos taurus DEP domain containing 1 (DEPDC1), mRNA. 0.0 6350 99.97 0.615116076104032 NM_001114120.1 DEPDC1 Homo sapiens DEP domain containing 1 (DEPDC1), transcript variant 0.0 2417 90.41 0.307558038052016 TCONS_00170321_1 sp|Q5TB30|DEP1A_HUMAN DEP1A_HUMAN DEP domain-containing protein 1A; 0.0 1063 86.73 0.978333333333333 1 coding 0 0 0 0 -0.132271733461109 0.409994860700751 0.0138010592833321 0.787722318969482 ATGGAGAATCGGGATGTGCCTCCAGGCCCTTATCGGGCCACTAAGCTGTGGAATGAAATTACCACATCTTTTCGGGTGGGAATGCCCCTAAGAAAACATAGGCAACACTTCAAAAAATATGGCAACTGTTTTACAGCAGGAGAAGCAGTGGACTGGCTTTATGACCTATTAAGAACTAATAGCAATTTTGGTCCTGAAGTTACAAGGCAACAGACTATCCAGCTATTGAGAAAATTTCTTAAGAATCATGTAATTGAAGATATCAAAGGCAAATGGGGGACAGAAAATCTTGATGACAACAGTCAGCTATTCAGATTTCCTACAAGTTCTCCACTTAAAACTCTTCCACGAAGGCATCCAGAATTGAGAAAAAACAACATAGAGAATTTTTCCAAAGATAAAGATAGTATTTTTAAATTGCGAAACTTATCTCGAAGAACCCCTAAAAAACATGGACTACATTTCTCTCAGGAAAATTCAGAGAAAATGAACTGTGAAATAATCGAGGAAGATCAAGAAAATTTAGCTGAAAACAGAGAAATAAGCCAGAAAGATGTTGAAGAAGTTTGGAGATATGTTATTCTGATCTACCTGCAAACCGTTCTAGGTGTATCCTCCCTAGAAGAAGTCATAAATCCCAAACAAGTAATTCCTCAGTATATAATGTACAACATGACCAATACAAGTAAACACGGAGTAGTTATACTGCAAGACAAATCAGATGATCTTCCTCACTGGGTACTATCTGCCATGAAGTGCCTAGCAAATTGGCCAAGAAGTAATGATATGAATAATCCAACTTATATTGGATTTGAGCGAGATGTATTCAGAACAATTGCAGATTATTTTCTAGATCTCCCTGAACCTCTACTTACCTTTGAATATTATGAATTATTTGTGAACATTTTGGTTGTTTGTGGCTACGTCACAGTTTCAGATAGACCCAGAGGGATACATAAAATCCAAGATGATCCACAGTCTTCAAAAATTCTTCATTTAAACAATCTGAATTCCTTCAAATCAACTGAGTGTCTTCTTCTCAGTCTTCTTCATAAAGACAAAACAAAAGAAGAATCAGATACTACTGAGAGACTCCAGATAAGTGATCAAGGATTTCAAGAAAAATATGATAAGAAAATGCAGCTAGTTAATTTTAAAAACAGAAGAGCCAGTGCTAATGACATAATAGGAGGAAGTTGCTATAATTTAATAGGCTTAAGTAGAATGCATGTTCTATCCTCTAACATCAAACCAAGGTGCTATTCATTAGAAGGAATTGTAGATTTACCAGGGAGTTCAAGTAAAGAGGTCTCCAGTGTCTTCCATCAATCTGTTCTGAACATAGAAGGACAAAATAATATGCAATCTTTAGGGTCTGAGACCAAACAGGAATCCCTGATGAATCTTCATTCAGAGGAAGGTATTCAAAAGCCATTCTCTGTTGGTTATAAGAGAACCTCTACTTTGACCACTCAAGACCAAGAGGAGTTATATAATGGAAAGTGCAAACCGAAACAGCTTTGTAGATCTCAGAGTTTACTTTTAAGAAGTAGTACAAGAAGGAATAGTTATATTAATATGCCAGTGGCTGAAATTATCATGAAACCAAATCTTGAACAAGGCAGCACCAGTGTGCAAACAGCTATGGAAGGTGAACTCGGAGAGTCTAGTACCACAATCAATAAAAGACTCTGCAAAAGCACAATAGAACTTTCAGAAAACTCTTTACCTCCAGCTTCTTCTATGTTGACTGGCACACAAAGTAAGGTTGATGCTTTCAATGCATGTAATATTAATTTTTAGTGTTTACTAACCCAGTTTTGCTTACCTGGCTTTTCTTCTCTGAAATTGCTTAATTTTTTCCTCCAAAAGAAAAAATTCTTGTTGTATAAGACTTGTCATGGCATAACTAAGATTTATTCTACTTACCTAAAGCACTCCTTTTCTTTGCCTTAAATTTCATTTATTCTGAGTCACTGTTTATAATTGGTGAAAGATTTTCAGTCCTTCATAATCCAATGGGTTATGAAGAAAATAATGAGTATCTTACCATGTTTTTGAAGAATGTGTAAATTTCATGGAATAGTTAAACATAATATTAAAATATTATTTTGCCTTCCTTATATAACTATATGATGGTAGTATTAAAACAACTAGTGTCATTGATGATTTTTTTTTTCTGGGGGGTGACTTTGCTTTCCTAGGTTTGCTGCAACCTCATTTAGAGAGGGTTGCCATCGATGCACTGCAGTTATGTTGTTTGTTACTTCCCCCACCAAATCGTAGAAAGCTTCAGCTTTTAATGCGCATGATTTCTCGAATGAGTCAAATGTTGATATGCCCCAACTTCATGATGCAATGGGTACAGATCACTGGTAAATGATACACACTTTTTCTCGGAGTGTGTTACGCTGTGCTGAAGAAGTAGATCTTGATGAGCTTCTTGCTGCAAGATTAGTATCTTTCTTGATGGACCATCAACAGGAAATTCTTCAAGTGCCTTCTTACCTACTGGCTGCAGTAGAGAAACATCTTGACTACTTAAGAAAGGGCCATATTAAAAATCCTGGAGATGGAGTGATTGCTCCTTTGCCAACATATTCATACTGTAAGCAGATCAGTGCTCAGGAGTTTGATGAACAGAAAGTTTCTACCTCTCAAGCTGCAATTGCAGAACTTTTAGAGAATATTATTAAAAATAAGAGTTTGCCTCTAAAGGAGAAAAGGAGAAAAATAAAACAGTTTCAGAAGGAATATCCCTTAATATATCAGAAAAGATTTCCAACCTCTGAAAGTGAAGCAGCACTTTTCGGTGACAAACCTACAATCAAGCAACCAATGCTATTTTTAAGAAAACCAAAGTTTCGTAGTTTAAGATACTAATTGAATTGAAAATTATGTACTACTTCTAGAACTTTGGTAAGTGAAGCCATATGTAAGAATTCAGGTACTATAAAAGAAGTATTTATTAATAAGGTATTTTTTTTTTCAATAAAACATTATATAAGGAGGTGCCAAATAGTTTTTATCATTGTGAAGCTGCTAAGAAACTAGTAGACCTTAACTGAGAGCAAATAACAGTAGATGATACCAGATATTTTAACCAGAAATGATCTTTTGTTTTTTATACAGCTATCTGGAAAAGTTATCATGATGTGTGCTAAAACTGTATTTACTTGAATTTTGAAAACTGACATTTGCTCATCAAGATTAAGCTGTAATTCTGTTTAAAAAAAAAAACTTATCTGCACATGCTTATTGATGTTACTTAAAGAACTAGATGTTTTAGTTGTTTATAATTACTTTTGTTTCTAAGTGTAAGAATGTGAAGACTATTTGGAAACTTGGTGAATTAATTTTCATCTACTAAATATTGCACTCTTATATATTCTTTTTCTACTTTTGATCTATTTATGTATCTATGTGTTTTAAAAATATGTATATATAAGACTTTGGTTTGCCTTTAATGTTTACCCCAACTGCTTCAGTCATTCATTTTTTTCCAGTAAACATCTTTTGCATTCTAATTGTCATGAATCTACAAGAAGGTAGAAATATGAAAGAAGTAGAAGGCAGTCATATGTTCATTTAAAAGATATTTATTTAGCAACTGCTATATGCCTTTCATTCTTCAAGATGTGAGGAGAAAATGATGAATAAAACAGAAAACCTCTTCCCCTAAAATATTTTCTAATCAAGGAAAATATACCTATTATATACTTAAAATAACAGTACACTCCCTGAAATCAAGTCATGAGGATTCATTCCTACTGAAGACTAGCCTTTTTAATGATGAAACAGTTCTCTAAGCTAGTGTTTTTTAAATTGGTGCATATTAGAAGCATCAGGAGGGTTTTAAAATAAAAAATGCTCAGGCCCTACCTTATATTGATTAAATCAAAATTTTAACGAATAGCATATAGGCCTCAGTATTTTTTAAACTCTCCAGGTGAATCCAATATTCAGCCAACTTTGAGAATCAGTGCCCTAAATACTTTGTATAAATAAAATGTCAAACTGGTATCATATTGGCTTTATTATTTCACGGAAGAAAATCCCAAGTGTAAGTTCCTGTCATCTTAATAGAAGGTTCTCCAAATTTCTACTTGACTAACAGTACAAACTTGAAGCAATTTTTCTTCCAAATTTTTCTGAAGATTATTTAATATCTATTTGGTAAGTGTAAAGATATACATACTGACTGGGATGTAATAGACACTTATTGTTCAATGACTGTTTTGATTTCTCAGTGTAATGTCATACAGTAAAATGACAATGTTCCATTTGAGATTAATATTTTTATTAAAAATAGGAACAGAAAATAATATATCTTTTTCCCAGAAACCTTAGCTAAAAATATTGAACCAAATTAGAATTCTTCCCAAGGTGTTTGTAGACTCAAAAATTTGTTTAAAGATGTGTACTAGTATGAATTATGTTGTGTATTGTGATAAAAACTATTGTGGGTTTTGTAACAATTTAATTTTGTATTTATTGATATTAAGTATATAAATACTATAAAGACATAGTAAACTTTCATCTCCATTAGTGTGCATTCAATTGAGGTTAAAGAGTACATGATGTAACACTTTAATAATGTGAACTCTGAAGTCAGATTTGGATCCTACTGTGCTATTTACTAGGTAACTGCAGACAAGTTATTTAAATTCTCTAAATCCCAGTTTTCTCTTATCTGTATGATAAAGATTATAATAGTACATGTCTGTTAGGATGTTGTGAGCATTAAATATAATAATGCATGAGAGAAATGTTTAGCACAGTATCTAGCATAGAATAGGCACTCTATAAATATTAGAAATTAATACTAGAAACACCTAGAATTATAGCACTAGAAGAGATTATAGGAAAAAATATAGTCCTCTCAGTTGCTTTGAGCAGAAGGGAAGGAACCAAAACAAAATTGTGAGCAATTTCTTGTTAAACTTATTTGTAGTGTGTGTCTTATTAAACTATTTTTAGTTATGAAAGAAAGCTTCTGATTGTACATACTGGTTGAAAATATTTGGTCGAGTATAAAGAAAAAAATTAATGAGAAAAGAAAACATTAATGTCTTCAGAAGCAATCATTGAATATGTGAAAGCATACAGGATACATTACACAAGTAGAATGCTTAGCCTTTGACTGGAATGTGGACAGATAACATTGTATCAGGGGGAAAAAAAGAGTCTTTAATTTCAAATATTGATGGGTTGCTTTGATGTTAAATGCTTACAGAAAGTTTCTTCTAATGCTTTTACTTTCTTGGGAAAAAAGAATCAAAATCAGCCCTTGAAAGTAAAGCATTTTGGGGAAGATGTTGCAAATTTCAGGGAAGAGGATATGAAATGGTCTAGCAAATCTGTTGGAACATGTAGGAAATTTTATTTCTGGTGCCAAAAGTTATCACCACCAAGCATTCCCACTAGCTTCTGCTAATTGCTGTCATTTACTGATCCACTCTTCTCATATACTATCTAGTTAATCTATATTCAGTAGTGGAAAGTACAAAGAATTTCCTACTGACTAGCTTTCTGTCCTTGTAAAGTGTAAACTCTGAGTTTCCTCATCCATAAAATATGAATAATAACATTTACTTAACCAAGTTGTAAGGATAATTAAAAGAGGCAATGTAATGTATTTAAATCTTGAACTTAGCAAGCCTAAGCTCAATTTCTAGATCCTTTCCTCTTATATTGAATTTAATAAAATTTCTGCTGATTAAAACTCC EMBV3_05767 CCCAAAAGGCTCCGAAGCGACCTGAACCAAACAGTAAGTTTTCCTCCTACCTTGTTCTCC Gene BVV0102_295890 - 0 NULL GK000010.2:67765184-67843327 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177299 1 XLOC_107073 NonCoding TCONS_00177299 XLOC_107073 NonCoding NonCoding - 3:47218939-47219100 - TSS132058 161 1 TCONS_00177299_1 48 1 0 0.00048412206918104 2.35060372283053e-05 6.15125944221712e-05 2.17558337508834e-05 3.18543338807159e-05 2.66257025230555e-05 1.44613183839298e-05 9.65469372066069e-05 2.28103302693077e-05 1.27778990506871e-05 0 1.23384445711907e-06 3.14655857655273e-05 2.9217363860973e-06 1.8396826611582e-05 0.000510538171708817 0.000135189666729376 0.000606150866417618 2.10239185053094e-05 8.12279341903458e-05 3.06094737773927e-06 4.68178659048635e-05 5.63258910449609e-05 8.44091819393766e-05 0 0.000169133228139048 4.56962359981819e-05 1.09375986539718e-05 2.21441530155181e-05 0.000559455794543745 XR_233643.1 LOC101906753 PREDICTED: Bos taurus uncharacterized LOC101906753 (LOC101906753), 6e-76 286 99.38 0.993788819875776 0 noncoding 0 0 0 0 -2.0448662141511 0.0063196790153044 -0.154695617100503 0.0363343375272233 GAACACATGACTGAGGCTAGGGGTGAGGCAGTACATGTATGTGCCAGGATACTCCTAAAGTATACTCTTAACGTAGATGAGGAGAACAAGGTAGGAGGAAAACTTACTGTTTGGTTCAGGTCGCTTCGGAGCCTTTTGGGGGAACCGACCTGAAGCCAGAG TCONS_00173199 . 5' 306617 TCONS_00173199 . 5' 306617 EMBV3_28252 GGCGATGTTGAGATAAAAACAGGTGCTGAGTAACATAGCATGTTCCAGCTGCTAGCCCTC Gene BVT0102_228697 - 0 NULL GK000004.2:71614457-71625583 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182011 TCONS_00182002 TCONS_00182012 TCONS_00182013 1 XLOC_110743 Coding TCONS_00182013 XLOC_110743 Coding Coding DFNA5 4:71591763-71615861 j TSS136101 2873 1 TCONS_00182013_3 301 0.192481726418378 7 0.881064032867162 1.5631191894248e-06 1.607081713827e-12 0.000376883344211936 0.000252299253512159 0.000178236357290462 0.000151238005142411 0.000125628540161338 8.83441618744654e-05 0.000456399096161295 5.10362521131368e-08 1.15622983083088e-13 6.62915191909921e-09 2.34419616231953e-06 2.69974984757319e-05 5.72482948341624e-12 6.58034756986027e-05 3.88089812948104e-10 2.85385676543088e-05 0.000835347511331327 2.32768507397106e-05 0.000504871640105569 1.41625571979517e-10 6.39928730953036e-05 3.00954078248711e-05 0.0003343426405575 0.000176047426216914 0.000143767634460326 6.9663362618767e-11 7.62943506059759e-13 0.000144251573781438 NM_001193112.1 DFNA5 Bos taurus deafness, autosomal dominant 5 (DFNA5), mRNA. 0.0 2484 99.93 0.479986077271145 NM_004403.2 DFNA5 Homo sapiens deafness, autosomal dominant 5 (DFNA5), transcript 0.0 825 80.02 0.318482422554821 TCONS_00182013_3 sp|O60443|DFNA5_HUMAN DFNA5_HUMAN Non-syndromic hearing impairment protein 5; 2e-149 433 71.81 0.98671096345515 1 coding 0 0 0 0 -0.0985642147664067 0.422977035737922 0.0402592823077719 0.508106709898979 GGTCTGATGGGAGCTGGCTTTAGCTGGCCCTGCCAGTATTTCTGTCCACAGTGAACCCCACCAAAGGCTTGGAGCCTGCTGGGGTGTCTGGAGGTGTCGGCGATGGAGGATGGGAACATCATCAAGGACACCAACGTGGTGCTGGAGATCCCAGCTCCCACCACCATTGCCTATGGCGTCATCGAGCTGTACGTGAGGGCAGACGGCCAGTTCGAATTCTGCCTCCTACAAGGGAAGCATGGTGGCTTTGAGCAGGAAAGGAGAAGCAACTCTGTCTTGCTGGACCCCCTGCCCTTCCGAGAGTTTGTGTTCTGGGACATGCCAGATGCCGGACAAGGGCTGCCTGCCCAGGATAAGCCACTGAGTGTTTTAAAACAAGCCACTCTGCTCTTAGAGAGGAATTTCCATCCCTTCATGGAGTTGCCCGAGCAGCAACAGATAGCCCTGAATGACGTCCTCCAGGCGGTCCTGTTGGATGAAGAATTACTGGTGGTCCTGGAACAAGTGTGTGATGACATAGTCAGCAGCCTGTCACCCTCACTGGTGGCTCTGGGGGAGCTGAAGCCATCACAGAAGCACAACCTCACGACCTTCCTGCGGCTGGTGGGGTGCAGTGTGCAGGGCGAGCGTCTGGGCTCACAGGATGTGGTTGACAACCAGAAACTCTTCTCTACAGCCTTCTTCTTGGTCAGTGCGCTAGCAGAAATGCCAGATAATGCAGCAGCTTTGCTGGGCACTTGCTGTAAACTCCAGATTATCCCTCTGCTGTACCACCTGCTCCGTGCTCTGTCTCATGATGGTGTGTCTGATCTTGAAGACCCAGCTTTGGCTCCTCTGAAAGATAGAGAAAAGTTTGGGATCGTGCAGCGTCTGTTTGCCGCAACTGACATTAACCTGGAGAGAATGCAATCATCCGTGAAAGCTGCCAGCAGGGAGGACCCTAACGTCTTACCACTGATACTTTACATCAGCCTGAGTGGACTCTGTGCTTTGGGCAGAGCACAGTAACAGTGTCACGTGCGGATTACAGGTACAGGCACACCTCATTTTATTGTACTTCATAAAGTGAAGTTGCTCAGTCGTGTCCGACTCTTTGCGACCACATGGACTGTAGCCTACCAGGCTTTTCCGTCCATGGGATTTTCCAGGAAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAATTGTACTTCATAGACAATGCATTTTTTTTTTTTTTAACAAATTGAAGGTCTGTGACAACCCTGTGTTGAGCAAGTCTATTGGCACCATTTTCCCAACAGCATTTGATCACTTGTGTCTGTCACATTGTGGTAACTCTCCCAGTATTTCAGACTTTTTCATTATATGTATCATGGTGATCTGTGATCTTTGATGTTACTATTGCAAAAAGATTACAGCTCGACTTGCTGAAGGCTCTGATAATGTTAACATTTTTTAGCAATAAAATATTTTTAAGGTATATACATAGTTTAGGCATAATGCTATTGTACACCTTAACAGACTATAAGATAGTATAAAAATAAGTTTTATATGCACTGAGAAACCAACAAGTTTGTGTGATTTGCTTTACTGTGGTGGTCTGGAACCAAATCTGCAGTATCTGAGATCTGCCTCTGCGTGGTATCAGCTAAGGCTGGCTACTTTTCAGCATCACCAAATACTGCCTCTGGGGCTTAGGTCACCATGGTAAACGATCAAGCAGATGAATTTATCTAATAGTTTAAGAAGTGGTGGCTTTTTGCATTACAAATCACCTTGAATTCAGCTACCAGTTACTCTGTACAGGGTTTTTTCATGGGAGGCCCTCCTGTGCTGCTAACCCAGTGTCCGAATTATAGACCCCAGCACCCCAGCTGGAGGAGGGTGGAGAATTCTAAGCCAGAGTAGTCAGACCTTTTCTCTGCAGGAAAAAAAATAGGTCCATTTATCACTTTATTTTCCCCACTTTCTGTTAAACAAAATAGATGAGGCTGACACTTTGATCCAAAAATTCATTTTAAATTATGAATGCTGTGGGGAGGCAATTTCTCTTCATAGAAGGCTACATTTTGAATGTGCTATATGCTATGCAGTGACTGAAAAATGAACTGTAAATGCCACTAGAGAACATAGTCTTCTGCTAAACAAAATTATGCTAAAAAATAACCTAACTGCAGGACATACTTCTCCTTAGGGCCTAGTATATATACATATATATGCATTTTATTTATTTGACTTTGCTGTGCTTTGATCAATGTACCAATCCTATGTCTAGAGCAGTGTGCTGATTTTGCATGCATGTTGGATGTTTAATTTGTAAAATGCTACATATTGTATCAAAGGAACTTTGAACTGTATTTTTCTTGTTTGTTCTGTTTTCATATCCTGCTATAAATAGCCTGAACTGTCTTCTGAGTGCCCCTAATGCCAATGCTAATATCCACTGGGGACCTGAAGCCACTTCTGCTTTCCCTCAGCAAAAAGTCGCTGCTCGAATTCGACTTACTTGGGGGGCAGCAGGCAGTGGGGATGAGGGCTAGCAGCTGGAACATGCTATGTTACTCAGCACCTGTTTTTATCTCAACATCGCCTACTTATTCCATTCCTGTGCTTCAGATTTTAATGAACGTTAGTTAATAAGCAAGAAATGAAGAAAATAACCCTTTCATTACGTCTATTAAAAATCAGACTAAATCATGTAGCTATTATGCAAATATTTAAGATATGTAAGAAAGAAAGAGTTGTAACTGTGGTGGCAACAACATAAAAAAATAAGCACCTCATACACAAATTGGAAAGGAACGCAAAAGTCAAAATAGTTGTGCTGAGATGGTGGCACTATACCTGTTTTTTTCTGCTTTTCTGAAATAAAATGAGTATAAAGAACAT EMBV3_15393 CTGCGCGAGATCCGCCGCTACCAAAAGTCCACAGAGCTTCTTATCCGTAAACTGCCATTT Gene GeneID:517139|LOC517139:XM_002697529:270_cdna Constitutive 0 NULL GeneID:517139 23 GENE LOC517139 NULL similar to histone cluster 1, H3f EMBV3_39562 GTTAGGTCTGACTCCCTGAATAATGGACGCTGAGAGCACGTCATTTCTAGGTGGGTACTG Gene BVT0102_273088 + 0 NULL GK000007.2:50819391-50847131 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217015 TCONS_00217012 TCONS_00217013 TCONS_00217014 TCONS_00217010 TCONS_00217011 1 XLOC_131406 NonCoding TCONS_00217015 XLOC_131406 NonCoding NonCoding PKD2L2 7:50821457-50960473 x TSS161720 5979 4 TCONS_00217015_4 136 0.220270948319117 4 0.957019026723735 0.000106129506757402 0.000359616830516218 0.000370758459965023 0.000100604995818519 0.000266228405587849 9.03195774445328e-05 0.000139332874483589 6.28269029269754e-32 0.000120160198692789 5.21094903256009e-05 4.99285314215709e-65 1.91525151151227e-204 9.69612902932474e-06 0.000143854350133275 3.35056280995315e-05 0 0 0 1.4419547115809e-05 9.23550791076768e-05 5.49459475315137e-49 0 0 0 3.42597478170253e-05 0.000396899645608451 0.00013903224944979 8.57756688577142e-46 0 4.29942088470404e-28 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 6e-114 417 93.48 0.0449908011373139 XR_249822.1 LOC101928005 PREDICTED: Homo sapiens uncharacterized LOC101928005 (LOC101928005), misc_RNA. 1e-65 257 87.14 0.034955678207058 0 noncoding 1 1 1 1 0.0269444995939261 0.834602518533752 0.0109194195722211 0.848772345561404 CCAGTCTTATTTTAAACTGAAAAAGCAAAATACAAACCAAACAAAATCCCCTCATCTGTCCCTAATCGTTTTTCGCCATCCGTCAACACTGCTTTGGGATGGCTGGCTCCTGTTAGAGGAGGAAAAAGGACTCTGCCTGGGATTCTGCTAAGGTCACTACTCCTTCGATCAACAAAGGCCTTCTAAGGCTGGCTCAGCGAAGGCCAATGTACAGCAAGTGGCTGCACCCAGATCCAGCTTCGTGCAAGGGCAAGGGGTGAGATGTCTCCTAGAGGCTTCACTTTTCCTGTCACACACAATGAGCCTCTCCGATTCTCAAGAAGAAGCTATGAAGGGTAACCGATCTGGAGATTATATCTCTCATCAGAAATCATGCGGGGTTACAAACTTTCTTGCAGGGTATTTCGAATTGCCAGTTCCGCCCTGCCCCACCCTAGGAGCGCCCCTCACCGCCCAGATGCCACCGGGAAGCCTCAGCCATTGCCGACTTGGACCACGACGCCCGTTTCGCCTTCCTAGGCCTTCAGAGCCTGCGCGATACTCTTGTGCACGTGCGCCCTTAGCCTGTGTGCCTGAGAGTCCTCTGACAACGCGCGCATGCGGGGCTTGAAGATGCGAATGCGCGTGCGCACTGAGGGCTGCGTGGAAGGGCTTGGCATGAGAATTCGGAAGTCATCTGAGTCGGCTATCTGCTCTTTCTCTCTGTACCAATGAACTTGAACTGCGGCTGTGGCCTGGACTCGGCATTCAAACACGACAAACTGACCTCTGGTTGTAGAGATATCTTGAAGATGCTGAAGAACAAACACAGAATTCACAGAATGGAAGAAATTGTTTCACCATATACTGTGATTTGGGGTGTCAGTTGCACTCCAGGGTCCTCTGGAATCTGGAATCACATTTCAGGTTATAACTTGGCCCTCAGACCAAAGAGAGAGGACCTGAGGTCCTTCTGCCTGGTGAGACCTAGGCTGCGGAACGTTATTTTAGGCAGAGGGAGTCACATATGCAAAGGCCTGGAGCTCAGAGAACATGACTTTTATGAGAATTGCAAGCAGTTCAGCACATCTGGAGAGTATGAAATTGATGATGGGGCAGCTGTCAAAAGAGAAGACATCTAACACCCTCAGATGATTGATGGTAACATTCACTGACGTAGGAGATGTACTCACTTCTATGACCCTAAAACTGACAACCAAGAGCAAAGTGTCAAGGAGGATGCTCCCTAACTGGTACAGATAACCATTTGTCTAAAAACTGCACAAGGATGCTTCTTGTGCTCAGAATTCAGTCACAAATTGCCCTAGACTTGTGCCTGCAGGAGGCCCTCCTCAGAAACATGAAGAGGGATGGAAAATGCAGCCTCTGTTGTATCAAATCTGCTTTCAAATAATGTGTTAATAAGAAAAAGGATACCTTACAATAGACATATGTTATAGGATGATTCATTGAAATATCAGTTTGCTTTTTATTCTGTTTTCCTGCCCTATTCCAAAAATATTTTTCTACTTTCTTTTTTTGAGCTTTTGTTCAGCAGGACCAATGCAGAAGTTGAAACCCCTTTTGTTTTTTAAAGCCTACAGGAACCTACTGTGTAGCACAGGGAACTCTGCAACCTAGATGGGAGGGGAATTTGAGAAAGAATGGATACATATATGCATGTGGCTGAATCACTTTGTTGTACACCTGAGGCTAGCACAGTATTGTTAATCAACCATATTCCAATATAAGATAAAAAGTTAAATTTAAATAAAAATCTCATCCTTTAGTTCTGCCTTAAAAGAAAGAAGACAGTCAAGTTTTGATGTTTAGTCTCAAACTTAGTGATACTATGATTCATGCATTCTTATTGTTTATTTGTTGGAATAAAGAGATAAAATTTTTTTTAAAAAGAAGAAAAAAAGAAAGCCTGAACTTATTAAAGGGCTTTTGCCAGGTATTCCCAGAGGAGAGGAGAGACAGGCAAGAGCCTCAGAGTGAGAGTCTACTATGGAGACCCCAAAGAGAGATTTATTTGGGGAAGGAGGGCTCCATGGAGTGGCAGGGTCCAGCATCCAGTCCCTCTGTGCTGCTCTTTTGTAACCCCCTGGGGATGCAACCTCTTCTCAGCATGGAGAGGCTTTGTGATATAGTGGGAAGCTGAACCTTTGGGATTGGGATTGCTAGTTTTGGTGAAAAAAAAAAAAAAAAAAAAGAGTCCCGGCTCAAGCTGAGAGGCGAGTTTCAGGAAACAGCAGTCACCTTCCTGCAAGGGACCCTGTAGTCTTGGGTAAAAAGCCTGTCAGCAGGGACCAATCTGGACCAAAGATCAGAGGACTGTCCCTAAGTAGTGTACTGTGTATAACCTGAAGTCTTTGTCCTAGGAATAGCACTTGACCCTAGTATTGATTGAGGTTAAATTTCTATCAACTTGAGGAGTGGTGGCTTAAAATGAGATTTGATAAAAGAAAAGGACTATGATACTTCTATCTCCTAGACTATGAAGTAACTTTAATACTCACTGTACACATTTCTAGCTTGCAAGATCTAGGGGAGATACTTACACATGAAAAGAATTCTTTCCCCCAGAAATATTCTGTTTAAGTCTTTCATTGTATCTTTTCTGCAAAATAGCTATTTCAGTTTGATATGTGCCTCCAGAAATTAACGCTAGATGGACTCAGGATGCCTCAACAAGCTTAGTTTTCTATTACTTTTTTCTGCCCCAGAAGCTGAAGTGGTAGGAAGGAAGGAAACAGCTAGCCCCACATTTGATAGATGCAGGTCCCTTTCTGTTCTCTACATTTCCCCAGTACTCCTGCGACTGACTTGGGCCAGAGAGCAGCAATGGGGTGAAGACTGGTTTAATTCCAGTTTTATTATAGCTTTATCTTTCAGATGCAAATTGTCATTCAAATACCCAAACTTAATATTTCTTTTAATTTGAGCCAGGTGAAATTGAGCTCTGAATTGAGCCTACTTCATTAGACTTTGGATAAATGATGACTAAAAGGATAGAATGACAATCCAACTCCTTCATTAATGATGTTTTTATTTTCCAAAGAAGAAAGCCTATCCAGAAACCATACAAGGAAAAGTGTTACAGTCTTAGCCATATATGAAGAAGTCAGTTGACTGCAGATTAGACTTTGTAACTTTGCCACTACCCATCTGTGTGGCCCTGGGCATGTCATTTTAAGTCTCTGGACCACATCTGCACATGGAAGTTTTGGAATGGATAACCTAAAATAAATTTCATGCTCTATGCTTCTTGTGATTCTAGAATGTATAGTAAGATTATTTTAAAGTAGAGATACAGGGTTATAAAGGAGCTTTATTGACATTAAATGCTTAGATATAATGGGACTTATTTTTCGTAGAACTTTTGAATGTGCCTGTAAGATCAGTTCAGTGTTTTTACAAAACCATTATTAAAACCTTGTGATGAAACTTAGAAATTGTATTAGTATATATTTTGGCTGTATGCAGTGGATAATCATATCAGAGCTTGGTGAAAAATAAATCCTCCCAAAACCAATGATGGGAATTAGAAAATTATTAGAATTTGAACTGAATTATATACAATTTTAATCCTTGAAAGAAATTCCTTTATTTGATTCCTATGGATGAAAAGTGCTTTCTATGTTATTTCAGAGGCTGGAAAATTGACCATATTTAGAATCCTGGGCAGCAAAGTAAAACAGATTTCAGGTAAATTATGCTGTACAAATAGTCTATCCCAAGAAAATAAATCACTGCTAAATTTACTGAGAGATCTCTTTCAGTGATTATCATATGGAATAGGTTCCTCAGGAAGCATTTGAGTCTTGATTTCATAGATGCTGCTGCTGCTGCTAAGTCACTTCAGTCATGTCCGACTCTGCGTGACCCCATAGACGGCAGCCCGCCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATACATAAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTAGCGACGCCATGGACTGACCAGACTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCTTCATAGATGCTAATCATTTATATAATGTTGCTTGTATAAATCTTGGCTAATTATTTTATTTTTTTCACTGCTTTTCTAGTTTTATTTGAAAAAAAAAAGGATGCGTGTAATTTCCTTTCTCTAATATTAATGTATTGAAATTATGATAGCAAATACCATTTAACTAAAAATGTTTAGATCCTGAATGATCCAGAAAGGCTTTATACATAATCTGAACTCACTGACCAACTACAACTGAATACCACTCTTACAGCTTACTGAGTAGACTAAGCTGTTCTTTATTCTCTTTAGTGTATAATTAGAAATTAGGTAGGATCAGATTCCTAAGGACTCAAAATATATATGGTGGTATGAATGTTACTTAATTCACAGGTCTTGAGTATTGAACATTTCACAAATTAAATCTTACTCTGAGTTGCCACTCTTTAGGTTAATGGAAGTTTGATCTCAATGAACACATTTTACTTTTTATATAAGTGAGGAAGAGAAGCTTTATTAAGCAGTTACACACATTTTGAACCATACTGTAGGCTAAAACTAGAAGTTGAAATGGACTTAACAGGTAAGATTTTAAAACTTCATTTTTACATGTCTCATGGAGAGGAAAATATCCAGTATAAATTTTGCTGAAGAAAATGAATATTTAAAAATTGAAGTTCTTATTGCAACTTTAAGAGTAATAGAAATAAAAGTCATAAAATTCAAAACCAAATGATGAATAATTTATGTAATTTTAAAGGAATGCGATTCTGTGACCTTGTTATGGAATTCGTAGGTTAAACAGTAAATCTGGTGTAATCTTACCTAGGCAAGATGTGATAGGAAGCTTTGCAGGAACAGATGAGTTAGGTCTGACTCCCTGAATAATGGACGCTGAGAGCACGTCATTTCTAGGTGGGTACTGCAGTATTTGCTAGGGCTGCCATCACAAAGTGCCACACACTGGGTGGCTTCAACAACAGTTTCATTTTCTCACAACTCTGGAGGCTAGAAGTCCAAGATCAAGGTGCTGTCAGAATTAGTTTTTGGTGAAACCTCTCTTTCTGGCTTGCAGACTGCTGCCTTCTTTGCTCCTAGTGAGGAAGAAAAGCTTTATTAAACTGTTATACACATTTCGAACTATACTATAAGCTAAAACTAGAAGTTGAAATGGAACACAGCCCTGCCAGCACATTGATTTTAGCATAGTGAGACATCTGTCTGATTTCCTTACTGTAAGATAATAAATTTGTGTTTTTTAAGGCAATGAGTTTGTGGTAATTTGTTACAGCAGCAACAAGCCAATATACCGTACACTGTCATGTGCTATGTTGTGCTCTGCTTAGTCACTCAGTTGTGCCCGACTCTTTGCAACCCCATGGACTGTAGTCCGCCAGGCTCCTCTGTCCATGGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGTTATGCCTTCCTCCAGGGGATCTTCCTAACCCAGGGATCAAACCCAGGTCTCCCTCGTTGCAGGGGGATTCTTTACTGTTTGAGCCACCAGGGAAGACCAAGAATACTAGAGTGGGTAGCCTATCCCTTCCCCAGGGAATCTTCCCAACCCAAGAATCAAACTGGGGTCTCCTGCATTGCAGGCAGATTCTTTACCAGTTGAGCTACCAGGAAGCCCACACTGTCAGAGCCTTGATCATTTACTTGTGTGACTCCAAACATAACATGTATGCACATTGTTTCTTGTACTTGAAATGCTATTACCTTCTTGTATGCCTAACTAACTCTTAAACCTACTTCTGAAGTTACCTTCTATTAGGAGAATTTGCTGAACTTTGGGTTTCTGTCCATTTCTATCTCAACACACTATGTTTGCAACATCTGTTGTACTTCTCTGTTATTGTTATTACTGTCATTGATTTCCC TCONS_00217009 s 5' 4949 TCONS_00213391 r 5' 0 EMBV3_40327 TAGGTCTACTTGTTAAGGATCAGGGAAAATGTCAGTGGAGAAGAACTCTAAAGGAGTTGG Gene BVV0102_130884 + 0 NULL GK000025.2:24307766-24618748 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33096 CTTCCTGGGCATGTGGATTTATTCTGGCTCTGGCCCATGCAGTTCTCCTCCTAAGATTGC Gene GeneID:787719|LOC787719:XM_002687025:91_cdna Constitutive 0 NULL GeneID:787719 4 GENE LOC787719 NULL similar to olfactory receptor 437 EMBV3_20582 AGGCTGTGTCTGGGACAGGCCACCAGGCTATAACGGTTTCCAATAAACTGCTTCCTCAAA Gene BVT0102_349740 + 0 NULL GK000006.2:104453233-104598184 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20775 GTGGCTAGGACTTCATTTAGAAGTATGCTCGCTCTTTCCATGGTTGAGAGGCCGTGAGTC Gene BVT0102_061183 + 0 NULL GK000016.2:12848627-13041912 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04857 AAATCGCGGGGGACAGAGATGGAGGGATGTGTCATAGGGTAGCATTTAAGTTAGGGCTCG Gene BVT0102_149953 - 1 EMBV3_18496 GK000019.2:43270820-43279034 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24490 GGCCACTGTTTGCATTGGCATGTGTCTCTGCCCCCAAAACCCAACTGCTTTGCTACAGTT Gene GeneID:784332|LOC784332:XM_002690675:262_cdna Constitutive 0 NULL GeneID:784332 10 GENE LOC784332 NULL similar to olfactory receptor, family 11, subfamily H, member 1 EMBV3_37732 AGCGACTTAGCAGTAGCAGCATTGTGTATATCCCTTGATGTGGAAAGAGGACCTTGCCCC Gene BVT0102_042132 + 1 EMBV3_27723 GK000016.2:40029768-40045560 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067169 TCONS_00067170 1 XLOC_041377 NonCoding TCONS_00067169 XLOC_041377 NonCoding NonCoding - 16:40037864-40039393 - TSS50578 1088 1 TCONS_00067169_1 73 0.920036764705882 2 0.289267015706806 0.000337617636123337 2.77066706984226e-05 1.75093503704591e-06 1.50334643536324e-06 2.7226862992425e-05 6.67270160152412e-07 1.04720055816597e-06 1.49522950076479e-06 0.000108861337022244 0 5.59328876517321e-07 0 7.25347619208176e-07 0 7.49502171360723e-07 0.00153082583714868 2.63939996359372e-06 0.000325383227752744 8.95264804451571e-07 0.000125583275132923 6.16685221492964e-07 1.29420653497086e-06 1.50712337095852e-06 0.000947630101019614 0.000242924485992566 1.63610753014756e-06 0.000150783098943806 0 1.1700820057921e-06 1.1135796726173e-06 XR_228040.1 LOC101902468 PREDICTED: Bos taurus uncharacterized LOC101902468 (LOC101902468), 0.0 641 100.00 0.325367647058824 0 noncoding 0 0 0 0 -0.00968307219614538 0.947469295941043 0.0210281423492412 0.654713225078773 GGAACCTCCATACTGTTTTCCATAGTGGCTGCACCAATTTACATTCCCACCAACAGTGCACAGCGTTCCAAATTCTCCACCTCCTCAGCAATACTTGTGAGGGCCCAGGCTGCCCAATCCCTGCTGAAGAGGTGCATATTGCACAGGAAACAGCCTTCATTCAGCCTCCCCGACCTTCCCTGAGTTCCAATGGGCGGATTCAAGCAGTTGTTAATTAGGGAAGGGAGGGGATGAGAGACCACGGACTGTCAAGAACATCCCTGGGGCAAGGTCCTCTTTCCACATCAAGGGATATACACAATGCTGCTACTGCTAAGTCACTAAAGTTGTGTCGGACTCTGTGTGACCCCATGGACCACAGCCTACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAGTACTGGAGCGGGGTGCCATTGCCTTCTCCGGATATACACAATATCTTTGAGCTATACTGCAGATACTGAAAACCCCTCCAGGTGGGAGATTAACAATTAATGTTGCTATGCTGTCCACAAGCATGTAGACCCCAGGCCAGTTGGACCTGAAGGTTGATTATGCTCCTACTTAACTCACCACCAACCCATCAGAAGAATGTCCGTGAGCTGACCACGCCCTCTTTGAACAATTACTATAAAATTTCTCACCGTTTTCTCCAAGTTGGGACTCAAGAGTTTTGAGGGCGGTAGTCTGCTGTGGCTCCCTTTGCTTGGCAAAGTAATAAAGCTATCCTTTTCTACTTCACTCATAACCCTGTCTCAGAGATTCAATTCGACACTGGCGTACAGAGAAGCTGAACTTTCAGCCTCTGGGACTGGCCAGATAGAGCACCACAGACCTGGAAGCCCTGGAAGAATCCACACAAGGACTAAAATGGAATGTTGTTCCAATTCTGAGCAAACCACATTCCTGTTCTCAGATGAGTCATGAATAGTCCTCCCTCTCTTTACTCAATTCCCTCTCTTTTACCCTGGCCCACCATAAATGTGGTGTCTCAACCCAAGTTGAGTTGAGAAGTTGATTTCTGAATTAGCTTCCCACCTCTCCATTCTCTGGCCACTGAATAAAGCTGTGCTGTTTCACT TCONS_00069160 r 5' 5682 TCONS_00069160 r 5' 5682 EMBV3_16619 GGTACTCCTCAAGAGGTAGATCATTTGGGTCATGAGTTGAATATAATGGGGAGGGGGCAC Gene GeneID:514533|MAGEH1:NM_001080728:2_cdna Constitutive 0 NULL GeneID:514533 X GENE MAGEH1 NULL melanoma antigen family H, 1 EMBV3_14005 CTGCAGGAGGCTAGCGAAGCGTACCTGGTTGTATTCCTTGAGTCCAAGCAGCACAGTAAT Gene GeneID:539855|LOC539855:NM_001076191:86_cdna Constitutive 0 NULL GeneID:539855 16 GENE LOC539855 NULL histone H3-like EMBV3_34713 GACAATGCACCTGGATATGGACCCATCATTTCTAGTCTCCCCCAGCTTTTGAGCAGGTTC Gene GeneID:518859|NUDT21:NM_001035331:264_cdna Constitutive 0 NULL GeneID:518859 18 GENE NUDT21 MGC128028 nudix (nucleoside diphosphate linked moiety X)-type motif 21 EMBV3_35188 CAGCAGCCCTGTGAGAGAAGAGTACTTATTCCTATTGTATAGATGAGGACCCTAACACCC Gene BVV0101_014822 + 0 NULL GK000007.2:70625539-70711503 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00222055 1 XLOC_135364 NonCoding TCONS_00222055 XLOC_135364 NonCoding NonCoding - 7:70673650-70675620 - TSS166053 1970 2 TCONS_00222055_3 66 0.485786802030457 1 0 0 0 0 0 0 0 0 0 1.60205736771941e-05 3.1328594255901e-06 0 0 0 0 0 0.00086027387598077 0 0.000258126372170848 0 0 0 4.89688883840753e-05 0 1.70199375429523e-05 0 0 0 0 0 0 XR_226772.1 LOC101906312 PREDICTED: Bos taurus hepatitis A virus cellular receptor 2-like (LOC101906312), misc_RNA. 7e-127 459 93.18 0.154822335025381 NM_032782.4 HAVCR2 Homo sapiens hepatitis A virus cellular receptor 2 (HAVCR2), mRNA. 1e-47 196 74.92 0.154822335025381 0 noncoding 0 0 0 0 -0.164003998007652 0.295197680930379 -0.020118340979926 0.690934643068045 GGAAAAACTCTGCTCGGTGGTCAAGGGCAGAATTTCTCAAATCAGTCAGCTGAGCCATCTCATGTCTTCAAAGAAGACAACACCAAGCCCCTAAATGAGGTGGTTGAATCTGGTGGCGTTTAAAGGTGACAGCAGCCCAGAGGTTGTTAGGATTGCTGCCCACCTTTGATGGAGAAGTAACACTCGTATGGATCCTCCACTTCATATACATTTTCTTCAATGGTATAGATGTTTTCCTCTGGGTGTATCCCCTGCCTCTGTATTTGCCAACCCTGAAGGAGAAAGGTTGGCCAAAGTGATGAGACTATGGAAATAAAGTATTGTAGTTGAGTTAAGCATTTTCTGGACAATATGTAATGGAATTGAGAGAACGGGCTTTGCTGAAGAGTTAGCAACCAAGGCAGTATACAATCCTTGATCAGGTCCTGAATAGGAAGGGAAAACAAAATAGCAATGAAATAATCTGGGGAATATTCTATACAAATTCAAATTATTCTGAAATTTCTTAGGTATAAAAGTGGAATTGTGTTATCTAAGAGAATATACTCATTCTGAGGAAGTGCAGACTAAAGTGTTTATGTGAAGTGTCAAGACGTTTGAAACACCTGTACAAATGGTTCAGAAAAAAACAAATTTGTATACATACAGAGAGAAACAAAGTAAATATGACAAAATATCAAATAATATGCTCAAATTGCACTGTTATTTCAATTATTATGTGGGTTTAAACAATTCTGAAAAGTAAAAGGAATGTGTTATGGATCCAGTGAGACTTGAGTTTGAATTCTACCTCTGTTGCTTACCACCCATATGATCTAGGCTAAGTTGGATTTGCCTTTTCCATTTATTCATTCAAGTACTATTTAGTGTGTTACACACTGAGCCCATGCATCAAGAGATACAACAGTGAACAAAACACAAAAAGCTCCTGGAGGCTGTATATTAGTAAACTCAGGGTGTTAGGGTCCTCATCTATACAATAGGAATAAGTACTCTTCTCTCACAGGGCTGCTGTAAGGAACATTTATCCATGCAATCCTCAAATATTTATGAAGTGTGTACTAAGAATCAGGTGTGCACTAAGGGATACAGTTGTTAATGTGGCTGATAAGTTCCTAATTTTCTATGGAGTTTACATTTATAGGTAGAGATAAAACATTAACCCAATAATTTCATGAAGAATGAACTAGTAGTACATGTAAATGTAAATATTACCTATTGATATTACAACATTTCAGGTTTCAGCTCTAATAAATACTGGTTATAGATCATATAAAACCATGATGATTAACTGTTCTATTTGGTCTTACTTGACTTTTTTACTGCAGACTATTTTGTCTTCATAACTATACCATCTACTGTGTGTGAATGCTAAGTCACTTCAGTCGTGTCCAACTCTTTTTGATCCTAGAGACTGTAGCCTTCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAGCGGGTTCCATGCCCTCTTCCAGGGGATCTTCCCAACCCACGGAGTGAACCTGCGTCTCTTATGTCTCCTGCACTGGCAGGCAGGTTCTTCACCACTAGCACCACCTAGACTTAGTCTAAAATTATTAGTGGTTCAGATAGTATTCAGTGGACAGAATCATTTTTTTCTTAAAATATATTTCATTCTTCCCATGTCCCAAATGTCACAGAAACCCAGTAAAAGTTACATAAGCTTTGTGTGTGTGGTGCTAAGTTACTTCAGTCATGTCCGACTCTGTGCAACCCCATAGACGGCAGCCCACTAGGCTCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTACCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTTGTCCGACTCTTAGTGACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATAGGATTTCCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTC TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 35884 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 37853 EMBV3_18589 CCTGCAAACTCGTGAGAGACAAAATTACAGGTCTCATATGCCCGTCCGAGCTCTGCCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01836 GGTCGGTCTCCTGTGATTGTAAGGTGTGCTCCTCGCTAGTACTCCCAGCTGTAGATTTAC Gene GeneID:529061|LOC529061:XR_084632:49_cdna Constitutive 0 NULL GeneID:529061 20 PSEUDO LOC529061 NULL similar to microtubule associated serine/threonine kinase family member 4 EMBV3_07658 GCTCCGGGGGCAGATTCACTGGATCATTATCACAATCCTCTGTTTCCTTTTGACTAGCGG Gene GeneID:505040|CD53:NM_001034232:53_cdna Constitutive 1 NULL GeneID:505040 3 GENE CD53 MGC137765 CD53 molecule EMBV3_19546 GCAGATGTGCTTCGAGACAAGCGCCAAGACTGGCAAGAATGTGGACCTACTGTTCGAAAC Gene GeneID:615760|RAB20:XM_002691990:84_cdna Constitutive 0 NULL GeneID:615760 12 GENE RAB20 NULL RAB20, member RAS oncogene family EMBV3_43300 TGCTGTATCACAATCATGTTGCCTTATTTCTACTTGAATTTGCGTCATTACCCACTCCAG Gene GeneID:509223|HEBP2:XM_002690275:23_cdna Constitutive 2 NULL GeneID:509223 9 GENE HEBP2 NULL heme binding protein 2 EMBV3_22487 AGAACCATAAGGGTATCATGCCTTCAGCTCCTACACCTAAGCCTAAGCCAGGACCTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06136 GGATCCACGAACTTCAGGAGACAACTGGAGATATTGTAGAAGGAAAGGTCAACAAAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22657 CACGTCGTAATTAGGTTCTATAATGATGCCAGCGGTCGGCGCTTAGCCTCTTTCCGGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21120 CAGGGAGTAAGAGGCAGCTTTGAGGATGTGGGATGTGGGATGCGTCTGGACCAAAATCAA Gene BVV0102_087309 + 0 NULL GK000005.2:117725433-117743263 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11879 CCACAGGGATGCTCTTTGCCCAGGGTAGCAAGACCTTCACTTGAACTCTGTGTCCTCATT Gene GeneID:533836|SPR:NM_001076003:16_cdna Constitutive 0 NULL GeneID:533836 11 GENE SPR MGC139718 sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) EMBV3_38324 GTGCCACTGAAATAGAGACTTTCAACTGCAAGGACAACACATCCTCGCCAGCGTCATCCC Gene GeneID:540061|LOC540061:NM_001046467:21_cdna Constitutive 0 NULL GeneID:540061 4 GENE LOC540061 MGC137300 hypothetical LOC540061 EMBV3_37611 TCCTCTGCCTGAGAAGAATTTGGAACTCTACTTGATGCGGGAGCAACAAACAGCTCAGGG Gene GeneID:407168|USP37:XM_002685571:150_cdna Constitutive 0 NULL GeneID:407168 2 GENE USP37 NULL ubiquitin specific peptidase 37 EMBV3_06413 GCCCATGTTATACTAGTGCTGTGAGCCAGGGACCACACCGTGAGCACCATTGTATTCCAA Gene BVT0102_034978 - 0 NULL GK000013.2:3876682-5424636 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044326 1 XLOC_026180 NonCoding TCONS_00044326 XLOC_026180 NonCoding NonCoding - 13:5036476-5041020 - TSS32611 657 0.269406392694064 2 0.855822143957737 6.21265783643725e-05 0 0 0.00026542943009416 0 0 7.98864017967521e-05 0.000243070313025419 2.40186867748768e-05 0 0 0 1.3101734588786e-05 0.00128160754966652 0 0 0 0 0.000305609681229209 4.3783547970951e-05 3.23441895912602e-05 0 0 0 0 4.28948755042903e-05 0.000267540843467383 0 0 0 0 noncoding GTTGAACCTGCAATCTCCTGTATTGATCATCACTGGAAGCCATAATGACACAGTTGGATCATCTGAGCTTTCTGCATTCAGGGGTTAATATTGGAATACAGTGGTGCTCACGGTGTGGTCCCTGGCTCACAGCACTAGCATAACATGGGCACTTAGACGTGTGAATCCTTGGGTCTCACCCCAGACGCTGAAGCAGATGTCGGCAGTGGAAGCCCAGGAACTGATGCTTTAACAAGCCCTCCAGGATATCCTCCCACCTGTTAAAGTGGGAGAACCTGTGCTGTGTAAATAAACACTGCTGATTCTGGACCAGATTCCTTTACCAGCTGGTGCTATCACTCGTGAGTGTGGGGTGGGCAGCTAACAGCCCACAGTTACAGCCTTCACTAAACAATTGTCCTTGGTTGAAAGCCCTTGCCCAGACATGGAAACACGTCAGGGGTGACGCCACAACCTCCCCCAGAGTCAGGCCAACCAGTGACTGAGGTGGGCTGTAAAAGTCCAGCCCGTTATCTCAAGACCTGGCAGTTCCGCAGCAGGGCTCTTCCGTGGACTCAGGCCGAGGTCAGACTTCACCTGATGCCGAGTCCCTGGTTGTCTCCTTGCCTTTCCCTCTGCTCTCTTACTCCTTATACAGCATCCTACCTCAATACCACC TCONS_00044327 s 3' 387529 TCONS_00044327 s 3' 383617 EMBV3_30903 GCAGTGAAAACCCAAAGACAGAAATCTCAGGTGAAGAGAACTGGTCTTGTGGTGGTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21879 GGTGATGCTGGAAGTCCAAGAACTCCTGATAACGAGGATTAGGGAAGGCCTCACGGTCAG Gene BVV0102_265322 + 0 NULL GK000026.2:25119773-25130960 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42590 CTGCCTCACTTATCCTATCTTCTGCCTCCGTTATTCTACTGTTAGTTCCCTCCAGAGTGT Gene BVV0102_167458 - 1 EMBV3_16358 GK000003.2:66445669-66701406 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089138 TCONS_00161953 TCONS_00238406 TCONS_00219680 TCONS_00037923 5 XLOC_053924 XLOC_098837 XLOC_145073 XLOC_132999 XLOC_021752 Coding TCONS_00219680 XLOC_132999 NonCoding NonCoding - 7:23927258-23928925 - TSS163678 1667 2 TCONS_00219680_1 73 0.997600479904019 1 0 0.000432573933438646 0.000550544628998304 0.000577704761134305 0.000528065937718158 0.00114813690887213 0.000197414097015665 0.000104949801952048 0.000388046551507619 0.000629665071903876 4.68958848802276e-05 1.23591256211162e-05 2.1756248374637e-05 1.26223239930908e-05 0.000750701267147809 0.000122998186196972 0 0 0 0.00017529423333208 0.00033631090838196 0.00040180673176359 2.22575557747623e-06 0 0.000530494254162719 0.00079423150843562 0.000692612149154003 0.000362198085910791 2.88097716616831e-06 1.35901538159244e-05 9.01657114075221e-07 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 7e-88 329 89.37 0.151169766046791 0 noncoding GAATCCAGCCTCTACTCTAGATTTTTAATCCTTGCTTTTTGGTATTTGTTATCAATTTTGTACCTTTAATAACCCAATCTTCAATACCCATTTTTACGTGGGAGCAAGATCACTGGCTTGACTGCTCTCTCCCTCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTCTATCTCTTCCCTCCTCTTTCTCTTCTCTGCCCGACTCTGTGAATCTCTTTGTGTGTTCTGGACTGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCTCTTCTTTTCATTCCCCCCTTTATCCTCCTGACCACTTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCGTGAACATCTCTGAGCAGTCCAGACTGTGGAGAGCACATAAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCTCTTTTGATTCCCCCTCTTCTCCTCCTGGTCACCTATATCTCCCTCCTCCCTCTTCTCTTCTCCATGTAACTCTGTGAACCCCTCTGGGTGTCCCTCACTGTGGAGAAACTTTTCATCTTTAACTTAGATGTTTTATCATTGGTGCTGTATAGATGGAGAAGTCTTGAAGCTACTGTAAGAATATGAATGAAAACCAGAGGCAGGAGGCTAAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATTGATAGGAGCTCATCAAACGCCTCCATACCTACACTGAAACCAAGCACCACCCAAGGGCCAAGTTCCAGAGCAAGACATACCATACAAATTCTCCAGCAACGCAGAAACACAGCCCAGAGCTTCAATATACAGGCTGCCCAAAGTCACACCAAACTCACTGACATCTCATAACTCATTACTGGACACTTCACTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAATACTGACACAAGCTTCCCTAAGCAGGAAACCTTGACAAGCCACCCATCCAGCCTCTCCCACAGTGAGGAAACTCCACAATAAAGAGAACTCCTGGAAAGGCCTCCCCAAACACAGCAATATAAACAAGATGAAAAGGCAGAGGAATACCCAGCAGGTAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTATCTGATAAAGAATTCCAAATAATGATAGTGAAAATTATCCAAAATCTTGAAAACAAAATGGAGTTACAGATAAGTAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGCAAAATAAAAATGAGTTGATATATAATGAATAATGCAATAAATGAGATCAAAAACACTCTGGAGGGAACCAACAGTAGAATAATGGAGGCAGAAGATAGGATAAGTGAGGTAGAAGATACAATGGTAGAAATAAATGAAACAGAGAGTAAAAAAGAAAAACGAATTAAAATAAATGAGGACAACCTCAGAGACTCTCTGAGGCAATGTTAACAATCTCTGGGACAATGTTAAACACCCCAACATTCGAATCATAGGAGTCCTAGAAGAAGAAGACAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAATCACCCAAATCCAAGAAACCCAGAGAGACCCAAACAGGATAAACCCAAGGCGAAACAC TCONS_00212582 TCONS_00212583 TCONS_00212584 TCONS_00212585 TCONS_00212586 . 3' 10109 TCONS_00212582 TCONS_00212583 TCONS_00212584 TCONS_00212585 TCONS_00212586 . 3' 11775 EMBV3_36848 CCCTGTGCTGCCCAGAGACTCTTTCTTCCGAGTGTCTCTACGTGTTCCCCTGCCAGTGGA Variant GeneID:507299|LOC507299:XM_002696971:137_cdna 334^709 1 EMBV3_37429 GeneID:507299 22 GENE LOC507299 NULL similar to glycosyltransferase 8 domain containing 4 EMBV3_29430 GAAGATCAGCAATATCAGTGGCTGGAAAAGAACATTCCCCAGAGCACAGAGATACTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19738 CATGCGTGCAGGTGTGTATGCTTGTGCGCATTGTGTGTTGAGAAATCTTTGTACTAGCAG Gene GeneID:100139934|LOC100139934:XM_002694906:981_cdna Constitutive 0 NULL GeneID:100139934 18 GENE LOC100139934 MGC134475 similar to zinc finger protein 90 EMBV3_40255 TCAATACGATTGGAACCAGCACAAGTACAAATGTTCCAGCCTGGTTAAAAAGCCTCCGCC Variant GeneID:540852|SAMD4A:XM_002690948:295_cdna 713^976 1 EMBV3_03443 GeneID:540852 10 GENE SAMD4A NULL sterile alpha motif domain containing 4A EMBV3_42306 ATGGTGACAGGCTTGAGTGGGCCCAGGGAAGCCAGCATTCACTCCACTTTCCAACTAGTT Gene BVV0102_259595 + 0 NULL GK000012.2:30039902-30136994 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27254 GAAAAGGTCAGATTTGAAAGGCAAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCTGCA Gene GeneID:535035|ESCO1:XM_002697722:45_cdna Constitutive 0 NULL GeneID:535035 24 GENE ESCO1 NULL establishment of cohesion 1 homolog 1 (S. cerevisiae) EMBV3_34652 TGTACAGAGCTACTACTTAGACAGAGAAGCTGGGCGTGCACCTGGAGATGCTGTTCATAA Gene GeneID:540248|SMAD4:NM_001076209:167_cdna UTR3_Alt 2 NULL GeneID:540248 24 GENE SMAD4 NULL SMAD family member 4 EMBV3_42812 CGCGCCTACGCTACGGAGCCGCACGCCAAGGACTTGTGCCGACAGCTCCACGCTCGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33120 TACAGCCTTGTCCACCAGGACCTCATTCTGTTTTCACCTCAGTTGTGGACTCTCATTCAC Gene BVV0102_116321 + 0 NULL GK000023.2:15921070-15930027 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134232 TCONS_00134226 TCONS_00134227 TCONS_00134231 TCONS_00134228 TCONS_00134229 TCONS_00134234 TCONS_00134233 TCONS_00134225 TCONS_00134230 1 XLOC_081342 Coding TCONS_00134225 XLOC_081342 NonCoding Coding MRPS10 23:15926787-15932516 j TSS100106 3702 2 TCONS_00134225_8 82 0.254186925985954 3 0.354224860335196 0.00192838605753691 0.00416141706774531 0.00222299504319069 0.00118390377723089 0.000239880530465273 0.000878045601534258 0.00143586803175004 0.00104817258224198 0.00486644425974198 0.00238448626939389 0.000539258371076643 0.000567048993319384 0.000471510955732606 0.00117736294958759 0.0019940743093636 0.0100719259935064 0.00570817068105099 0.00296423168728043 0.00418072193614595 0.0033108065811724 1.97448593317654e-09 0.000869986637259283 0.00236008407042586 0.00657440275659548 5.54086829293541e-07 1.70427036967094e-06 0.000412009076381641 0.00089122868573263 0.000562056420430579 0.000906125410272071 XM_005223435.1 MRPS10 PREDICTED: Bos taurus mitochondrial ribosomal protein S10 (MRPS10), 0.0 5323 100.00 0.796866558616964 XM_005249206.1 MRPS10 PREDICTED: Homo sapiens mitochondrial ribosomal protein S10 (MRPS10), transcript variant X1, mRNA. 4e-120 437 70.36 0.252566180443004 0 noncoding 0 0 0 0 -0.666923820942303 0.13042472541068 0.056026933012032 0.270975461312525 GGAACATCTCACTGGAAGTACAGCAGATGTCTACTTGGAATATATTCAGCGAAACTTACCTGAGGGAGTTGCCATGGAAGTTACAAAGACAAGATTAGAACAGTTGCCAGAACACATCAAGAAGCCAGTCTGGGAAACAACACCAGAGGAAAAAGGAGACAGCAAGTCATAAAGTCCCACAGTGACCACTTGTGCCGGGGTGTGGAGTGAACGTGTCAAGCGGAGGGACCCTCCCGTGAGGACTACTTCAGGTCTACCCGACTGCGCTCCTGAGGCTGCACAGCCTGATCAGTGGAACTCGGGGGTCAGAACTTTACGATCCACTGGACTGTTGTGCAAGAACCGCTTTATCTGTTCTTTTGTAAGCCTCATGTATTTCAGTTCTGATTTTAACAAATATGAGCAAACCATTTGGACCACTCTGTGCCAAAACAGTCAAATTGACATTTTGTTATTCCACTATTGTTTAGTTATTAGTTTATACTGATTGTGATTTCTGTTTTTTCATTCATCTAAAAATGAGTATTCCACATACTCCTCACACACATTTTTTTCTTTTGAGGGACCTAAAAGGAACCTTTGGTTAATTAAACATTGAGCAGTTCGAGTTTTTGATACTTACCTTAGTGTAGGCTGGCATATGATAGTTTGGGATGATGACCTCCAAGTTTTGCCTCATGTGAGCATTACTTTCTTAAAAATGGATGTACTTTGCAGCAGATCAAGCATGTTTGTGGCTTATGCTGAACCCCTCTGGTGCTGCCTAGAAGGGTCACTGTAATGGAATTTGAGCTCTCGAGAAATCACTGATTATTGGTTCATTCATCCCATAATTTGTTTATTCAGTAAGCTTTTCTTTTGTTAGCTCTGCACCCAGTACTGTAGTAAATACCAAAAATTGAATAGCAATAATGGCTTTCAAAAATTGTGCAAGGCACAAATGAAAACTTTTCCTTATTAAGTTCCGTGCTGATAAGACCTCTTTCTTTTGCTGACTAGCACTCTTTTTGTTTGGAGATGTCTACTTTTCCATGAAATTAGATAGTGGTAAAGAGCTCTGACAGAGGCAGGATGACAGTGGGCCGAGACTGCTGGTGTGTCAGCCCCAAGGGACTGGCTCGTTTCCTTTTTACAGAAGAATCGGGTGCTTGTCTTGTGGTTTCCTTCTCATCTTTGGGGTAGTTATGACTTCTCAGTTTTCCCCCCTTAAACTGGAATCCCTGTTCTCTTTTCCTGACCTGCTATCAGGTATGCGTGTTCTGAATGCACACTGCTTAGGTATCAGGCTTACATTACCGTCATTAACTTAGAAAGAATTACAGCCTTGTCCACCAGGACCTCATTCTGTTTTCACCTCAGTTGTGGACTCTCATTCACAAATGAATAAAGCGTGATTACCCCAGGTATAAGCCTCAGGATTGAGAACTGATCAATAAAACAGAACCAATATCATAGTAAATATACATAACAAAGCAGCCATTGTGGCTCATTTTCACTATAAAAAGATTCTTTAAAAATAAATACAGACCCACATCTAACCCTTTTGGTGCTTTTATTACAGACGGTGTCAGTCACGTGATTATAGTAGGGTGCCTTGTGCACTCTCGCATCTGGTGGCTTTCCTTTAAAGGTATACTTCCATTTCCAACTGTTTTCAGACTAAAGTAGCCTGTAAACCAGATGACTTAGCTCTTCACATTACATATTAAAGTCTCATTTTAAGATAAATAAACTACACACACAACTAAAATGAGTGGTGTTTCCTTGACATAAGTAATTGGCATATTTGTAGCCTACTTGATATAAACTAGGTAACTTCTTTATTCTCAGACTGAGAAAGTTTTGTTTGTTCTTTTGAATTGGGTCTCCTGAGTAAAATGCGCATTCTTAAAATTAGAATTAATGCCCAAGTCTCACTGTCTGTTCGTGGTGGTGATGAGAGGTAGTGAGAAGCGTAGACCTGCTCTCAGGATGGACCAGAAGGCAGGTATGAACTAAGGTGGTCTTTTATTGAAGTGAAGGCCTGAATTCATTGTTGCTTTCTCTGAAGTATAGTTTCTTTTTATAGTATATAAGATGGTGTTAAGGTCTGTCTTAAACTATTGGTAGACTCAAACTTGTTCAGCACCTGGTAGTTTTGATTTCAAGGAGAATTACTTCATATGTCCTTTGGCCACTTAGATATGCCGCAGTAAACACGTGAAGCAGTGGTTTTAATGTGGTCTGTTTTCTTCACATTTCTGTTGGTCAGCTACCATTCCTCCTTCCTTAAACTGTATTATTAAATGAGCTTTACTACAACATTTATGAATAGCCAAGTAAAGAAAATATGGACTCTGGAGCCTAAAAGGCCTGAGGCAGATAAGAGTTGATAACCCACTAACTGGTATAAAGTTAGGCAAGATGTTTAACCCTGTCAGAGCCTCAATTTACTCAGTAAAACGTAGGAAATCTACTTAGGAAGGTTGGAGCATTTAATCAGATAACTTACAAAGCCCCTCACAGAGTACCACAGTACCAGGCAGATAATAAGACATTCAGTAAGTATCAGGTGTGTAAATGAGAAATCCTGCCTGCCATATCAGTGAAAAAAGAATGTCACAGCCATTAAGCCATCACATGACAGCCACCCCGACTGTGCACCCTGAGAAGACGCAGAATGAGAAGCACAGGATACTGGCTCCAGATAGCAAAGGATTTCAGTGAACCCAGACTCTTGCATCTTCCCATACCTAGAAAAACACTAAATTCGTTAACTCTAAATACCTGGTTTTTCTTTTACAGTAATGTTTTGATGTTCTGAATACCTAGTCTTTGTTGCAAAAACGCCTATACATCCTGGCCCTCCCCCCTCACCTCTTCGAAGCAGCCTCTCGGAGTTATCTGAGATGCTGTGTCCTGAGCCCAAGTCCTCAGTTTTGTTCAGCAAATAAAACATAATTCTCACTTGTAGATTGGGCGTTTTGCTCAGTTGACAGTTATTACAGGCGGCAGAACAAACAGTACTCCAGATGCTCGTGTGCTGTACAGTTTAAAAACCAGCAGGAACGGCCTTCAGAATATCTCCAAGCTAAGCATACTACCTTACAATGGTTGCAAAGTTTAATTTCGATGAGAAAACATGTAGCATGCTCATTATAATAACCCCCATGTGTTCTACCAAGCATTTATAGATACTATCTTTTTTACAGATCCTATCTTATTTAATCCTTGTAACAACTCAATAGTTACTCTTATGATCCCCGTTTTATGGAAGAGAAAATCAAGTTTGACTTGCCCACTCAATTGCCCTTTCAGTTTACAGATAAAACAGACGAAAAAGGTGAAACTGATGAGTTCCAATTACTAACGACAGAGACAGCCGCCTCAGAACCTAATTTTGAAAGGCTAGGATGGGACTTCCCTGGTGGTCCAGTGGTTGAGAATCCATCTGCCAATGCAGGAGACATGAGTTCGCTCCCTGGTCCAGGAAGACTCCACATGCCACAGAACGATTAAGCCCCACACACCCCGACTACTGGGCGCACATGCCCCAGAGCTCATGCTCCAGGGCAGTGAGAGTCCCGCGCGCAGCGACAAGACTCAGTGCAGCCAGAAATCCTTTTTTAAAAAGATGTTTAAAAAAGAAAGTCTGGAAATATGTACTGGAATGCCCGCATATTAAAGGCAGACTACTCAAACCTAAAATCCAGATTATGTCCC EMBV3_32536 CCATGAGCCACAACTACCAACACCACACTCTGCAACTACTGAAGCCCAAGTGCTCTAAAG Gene BVV0102_339671 + 1 EMBV3_30965 GK000003.2:16515183-16519219 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06535 AAGCACGGCTAGATTGGGTCGGCTACAGCCATCTTGTCTCAGTTGACCAGAGTTTCTAGG Gene GeneID:508541|STAT3:NM_001012671:91_cdna UTR3_Alt 2 NULL GeneID:508541 19 GENE STAT3 MGC128731 signal transducer and activator of transcription 3 (acute-phase response factor) EMBV3_02549 GCCACTGCAGCTCACCTGATGGAAGGCTTTTGTCACCGAAGTAGGGAGGTCATCTGATTT Gene BVV0102_048971 + 0 NULL GK000030.2:18549243-18627967 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246468 1 XLOC_150989 NonCoding TCONS_00246468 XLOC_150989 NonCoding NonCoding LOC100847415 X:18596148-18600022 = TSS184770 790 1 TCONS_00246468_1 35 0.216455696202532 2 0.796540149754712 8.61120668772418e-05 8.90367666300869e-05 0.000257707054224419 0 0.000299981228919023 0.000253563136068741 7.3819087311369e-05 8.23568850250589e-05 9.98751392951942e-06 0 0 9.05236494074501e-07 0 0 1.09594873846175e-06 0 0 0 0 3.64122059490175e-05 0.000349685217061685 5.63595810049572e-05 0.000243868196850637 0 3.50808881300966e-05 6.24281513246142e-05 0.000140916311900543 2.43169212267024e-05 1.38264217239635e-05 3.80522122366749e-06 XR_139074.2 LOC100847415 PREDICTED: Bos taurus uncharacterized LOC100847415 (LOC100847415), 0.0 1424 100.00 0.99746835443038 0 noncoding CGCACGCGCCCCCGCAGCGCACGCGCCCCCGCAGCGCACGCGCCCCCGCAGCGCACGCGCCCCCGCACGCGCAGTGCAATGGAGCGGAGAGAAAGACCCTTAACTGGGTCTGCTGCATTAGTATCTGCTTTCCTGGTGAACTAGGGAACAGACAGGCCACCTCTTAGTGCAAGGCCAGGCTCATTGCTGCTCATATCTGCCTGTTGGAGCACTTTTGTGGCCACTGCAGCTCACCTGATGGAACGCTTTTGTCACCGAAGTAGGGAGGTCATCTGATTTGGCACCTATAGGAAGCCACCCTGATTGCAGGATTTCCAGCCTTCTCCTACATGTAAATCATCAATAAACATGACGTGACAATTAAGACTGAGTGAGAGATAGCAGAAACAAATGGCAAAACCAAATCTCCAAAGGCCTCAGATATTGGAAATGTCTGCTTTAGTTCGAAGAAGAAATGTATTCTTCCACTCATTTTGTAGACCTAGAAAGCAAAATTGATCTCTTCGGTATATATTTTTTGACTTAGTTTTTAAAAAAATACTGATTTATATATTTGCCTGCGCTGGGTCTTAGTTACAGCACACAGGATCTTTGATTTTTATTGCAGCATGTGGGTCTTTGTTATGGCATGTGGGACCTAGTTCCCTGACCAGGAACTGAACCTGGGCTCCCTGCATTGTGAGCTTGGAGTCTTGGCCCTGGAGCACCAGCAAAGTCCTTCTTTGGTGTATTTAAAGAAACTAGAATAACTGGAAACATGAACAAGGAATAAAGGGCTACCCAAAATGAC EMBV3_05565 TGGAAGAGGTTCCAGAGCCTGGTGTTCTTATCCCTGCCCGAAACTTCTAAGACAGAGGTG Gene GeneID:613775|LOC613775:XM_002685449:74_cdna Constitutive 0 NULL GeneID:613775 2 GENE LOC613775 NULL similar to primary ciliary dyskinesia protein 1 EMBV3_40452 TCGAGCTTGTGGGAAATAAAGCAAGAATTCTTACACCTATGAAGCCAAAGTAATCCAAGG Gene BVV0102_370611 + 0 NULL GK000014.2:45491348-45499599 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053431 1 XLOC_031718 Coding TCONS_00053431 XLOC_031718 Coding Coding TPD52 14:45498476-45550008 = TSS39407 3442 1 TCONS_00053431_1 224 6 0.933321689856591 0.000206745527609349 5.88701946429638e-05 6.18797275425542e-05 4.83955541046197e-05 8.66114700020726e-05 5.41165767543831e-05 0.000246728996972586 8.33073005789052e-05 0.000262264345751639 3.45835696109917e-06 1.90659877130694e-05 4.11245453722749e-11 8.41937123876244e-05 0.000202896505110756 0.00057204925007307 0.00552917221295827 0.00568167755191052 0.00391645869394743 8.96394035906835e-05 4.19093376750644e-05 1.77043716392546e-05 0.0032229635570266 0.00227116260736568 0.00488516674671549 0.000123376332038974 9.53772416023781e-05 9.77396004165235e-05 0.000279049494020976 0.000388735183304657 0.000150247633016181 XM_005215524.1 TPD52 PREDICTED: Bos taurus tumor protein D52 (TPD52), transcript variant 0.0 6123 98.79 0.999128413712958 NM_001025252.1 TPD52 Homo sapiens tumor protein D52 (TPD52), transcript variant 1, mRNA. 0.0 2924 79.59 0.97588611272516 TCONS_00053431_1 sp|P55327|TPD52_HUMAN TPD52_HUMAN Tumor protein D52; 3e-138 391 93.75 0.995535714285714 1 coding 0 0 0 0 -0.119819174338107 0.67518573227791 -0.0380575844374688 0.531052218227783 AGGGCTGGATCTCTTCCTCGGAATTGCCTGGTGCAGTGATCCAGAGCGCGCTCAACCAAGGAAGAGGTGGTGGCAGTAGAACCATGCGTTCTGCATTCGCCTGGAATGGACGGTAGAGAGATGGATTTTTATGAGGACTACGAGTCCCCATTTGATTTTAATACAGGAGTAAACAAAAACTATCTCTACCTGTCTCCCAGTGGAAATACGTCCCCACCAGGATCGCCTACTCTTCAGAAGTTTGGTCTGCTGAGAACAGACCCAGTACCTGAGGAAGGAGAAGATGTTGCTGCCACGATTGGTGCCACCGAGACTCTGTCAGAGGAGGAGCGAGAGGAGCTGAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCACCTAGCGGAGATCAAGCGGAAACTTGGGATCAATTCACTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGATGTGACAGCTACATCTGCGTACAAGAAGACCTCTGAAACCTTATCTCAGGCCGGACAGAAGGCTTCAGCTGCTTTTTCGTCTGTTGGCTCTGTCATCACCAAAAAGCTGGAAGATGTAAAAAACTCCCCAACTTTCAAATCATTTGAAGAAAAGGTTGAAAACTTAAAGTCTAAAGTCGGGGGAAACAAGCCTGCTGGTGGTGATTTCGGAGAAGTCTTGAATTCGACTGCAAGCGCCAGTGCCACCACCACGGAGCCTCTTCCAGAGCAGACGCAGGAGGGCCTGTGAGCCTCCCACCTTTGTTCTGCTGCTCACTGCCAGATGCTGCAAGCGAGATCCAAGCACATCTTGTCAACATTCATTGCCATGAACTTCCACCAGATGTGCTTTTGTTGAGCTTTACATATTCCTTTGACCAAATAGCTTGTGGGTTGAACAATGTAAAAGTATCTTCACTTCTATTCCTGGGAAACACCCTTTAGTGTGCATTTCAGCCCCTTTATTTAGCAAATGTCACGATGAAAACACATCTAGTACCTGGGGATCCTCACTAGAATGAAATGAGAAGCTGTGGGTTATCATAATTGCTTACACAATTGCTCTGGGTGTGGGCTACCAGTTTGATCTTTTTCTTCTATACAGGTTTCTGTTTTTCCTCTTTGAATCTCTGTATATTTGATTCCTAGATTAGACTCTTCTTTAAAATGCTCTGCATCCTGCTTATTAAAAAAGTTTTGGCGAAATGTTCTTTACCTCCGAGGGAAGAACTAAACAGCTACACAAAATATTTTTGAGTATTGTTTGGGGATAAAGTATCTTATATCTTGGGTGTCTGAAGACACCAGACTAAGTAAATCTTCTCTATATTCAGTTTCTTATAGTTTTGTAAGTGACATTATGTACAGTAATTTCAAATCCTAGGTGACCTGAGAGTGGAGCCCTTTGTTTATCACCATCTGTGACAGTAACCATTTCAGTGTCATGGTTATTATGCTACTTATAGCTACTTATTTTTCACCAGATTAAAATTTTAGTTTTGGAGGAAATTATAAGGTAACATTCTAAATCAAGTATATTGTATTATCAATAGGTTGAAATTTGAACACTGTCCTCAAACGTTCAGTTCCAAAGCCTGAAAGTTTTTTTAGATCTAGGTAGCTGAAAAGTGCTAAAATCAATCGCATTAGGGGAAACACTGTCTTCATTTAATTCATTTAGCAGCATTTAAAATAAGCACACCAAGTTATATGACTAATATAACTTGAAAAATTTTTATACTAAGGGGTTGGTAATAACTCCTGAGGATTTCATGCATTAATAAAAATCAACTCATCATTTTCTACTTACTTGTTTTCAGTTTGTTAGAAATTACAAAATGATACTGTAGGCATTGCCCCCTGCTTTGAAAACAGAGTGTCAGGGCTGAATGAACCAAAGCCTCTGGAAGTATCTGCATGGAGGCCAAGGTACTCTCATTAACTCTAGTAGTTACTTACTCATCATCACTATCTTTTCCTTATGCTGTGTATGGTTATGGCCTACAACGTTGTATTTGTTATTTATCAAGTTGTGATTGTTTTATTATTGTTTATGCCAAATGTTAATTGCCAAGTTTGGAGTGACCTAAAGCATTTTTTTAAAGCATGACTAGATTTACTTGGGGATAAATTATCTTATGAAAACCAAATCTGAAAAGCTATAAGTGTTGATTGTTGTGAAGTAACATGCTGCCCTTTTTGATTGCTGGCGCTTTTGTGAGCACTTCAGATGCAATTGAAACTCTGCTCTATTACATGTGAAAAGCTTAATAAATTCTGTGTGTCAGTAGCACAGGTCCCAATATTTATTATGAGACCAATGGTCTGGAAACAGCTTGTTGTATTACATAATCAACTGGTACCCAGGCTTTAAAAAAAAAAAAGGCAATTTTTTACCATCTGCTTTATATCATTGCTTCATGGTATCAGACTACCGTATTTACTTGCAAAGGCTTTAAGGCAAAGGTTGTTGAAGCATTGTCCCAGAGGAATCCATGTGTATACATTTGTCTTTTTAAAGAGATACTATGGTTACTCAATAAGGCTGGTAAGTTATTTTTTCAACCAGTTAGTCTTTCAGTTGCTTTTATCACATCTTTCATCACACTGATTCTTGGATGTCCTGCTCTGTTACTGTGTTTTTAATAAGGCAAAATGGAGAAGATGGCGATTTCCTCAGTTTAACAAAATATCCTCAAATCTCTTTATTTTATGGGAGAAATGATAGAGGTAGGGTTGGAAGGTGGGATGGGTGTACGTGGGTACTGGTGATGGTCGTAAAAGAAGAAAATGGAGAAACACTTTTATAGACATCTACCTAAACTTAATTTAGAAATGATTTAATCTATGGCAAAGCACTCTGCCTCTAAAGAAGCAACAAAAAAGTAGAGGGAGGATAAATGTAGAAAAATACACATCAACCTAGAAATCTTATTCCAAGTAGTCTCTATGGAAGATCCAATATTACAGATTCACAGATACTTAAGCAATTTAGAACACAGTAATTACTAAGAGCACCAGAGAGGGATCCTGGTTATTCTACTGTGTTTCATGTTTGACACTAGAAGAGCATAGCAACAAGACTGAGAGCTCAGATACTTAAGGATTCAAGAAGAGTGATAGAAGAAAACAATTCCTAAAATTATCCCCTTCTTACAAAGGAATATCCTTAATTTATCGAGCTTGTGGGAAATAAAGCAAGAATTCTTACACCTATGAAGCCAAAGTAATCCAAGGAAGAGAGTAGAAACCATTGGATTATTTTAATAGTAATTGAAACTACTGAAATAGAGGGGAAAAAATAATGTTGAATTTGGACTATTTCTGGATCTGTTAATGAAGAAATACTACTGTTTATTATTTTTTTTTGTATAGCATTTGAAAACAATAAAAAGTCTATAATTTGGGCATGA EMBV3_11964 TTTGCCTGGGTAAATATTAGTACAATTAGTGTAAACTGTATCAATTCCCTCTTGGTGTGA Gene GeneID:513608|ARG1:NM_001046154:4_cdna Constitutive 3 NULL GeneID:513608 9 GENE ARG1 MGC128755 arginase, liver EMBV3_28295 GGTTAAAAGGAATGACTTCTCTACAGCAGAAGATGGTGTTAGTGATTGCGAGCTGCTGGC Gene GeneID:538195|DCUN1D4:NM_001076100:125_cdna Constitutive 0 NULL GeneID:538195 6 GENE DCUN1D4 MGC134196 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) EMBV3_02167 GAGCCTGCCGCTACAGCTATGCCCAAGAATAAAGGTAAAGGAGGTAGAAACAGACGCAAG Gene GeneID:100271756|EIF1AY:NM_001145757:2_cdna Constitutive 0 NULL GeneID:100271756 X GENE EIF1AY NULL eukaryotic translation initiation factor 1A, Y-linked EMBV3_30976 ACAGAAAGGGTAGGGAAAAGTGGCAATGTACCAGCAGGCACTACTGTGGATAGCACCATC Gene GeneID:528046|EIF2C4:XM_002686552:819_cdna Constitutive 0 NULL GeneID:528046 3 GENE EIF2C4 NULL eukaryotic translation initiation factor 2C, 4 EMBV3_05260 CATTCCTCCACCACTCGAAGCACATACTCTGTTTCTGGTAGCAGCCCATTCTGGGGGAAA Gene GeneID:525161|DCAF12:NM_001167896:37_cdna UTR3_Alt 2 NULL GeneID:525161 8 GENE DCAF12 WDR40A DDB1 and CUL4 associated factor 12 EMBV3_34425 ACTCCAGGAAGTGGCTTCTGCATTCTTCTGACAAACGATTCCTGCTCCCAGACCTTAACC Gene GeneID:514683|TMEM214:NM_001083432:126_cdna Constitutive 0 NULL GeneID:514683 11 GENE TMEM214 MGC142711 transmembrane protein 214 EMBV3_17090 GAAGTGCTTGACATCACAGAGGAAACTCTGCCCCGCTGCTGCCCCTGCTGCCACCACCGC Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 694^911 11 EMBV3_14664 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_25486 GCGAGGCCAAGGGAACACTCAGACCACAAAGAATCCCAGGAACAAAGGGTCTTCCAGAAA Gene BVT0102_080178 + 1 EMBV3_14085 GK000003.2:107244781-107558700 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03850 CCTGATCACTTGGGCAGTACAAGAAAATCTAGCTTCTGAATAGTGGCCGTCTCTATGGAG Gene GeneID:529404|CCDC50:NM_001038147:90_cdna Constitutive 0 NULL GeneID:529404 1 GENE CCDC50 MGC133563 coiled-coil domain containing 50 EMBV3_41628 AGGACCGAGACCTGCGGGCAGCAATGGAGATCATCTGTGATAACGTGGGGAAGGACTGGA Gene GeneID:493720|FADD:NM_001007816:227_cdna Constitutive 1 NULL GeneID:493720 29 GENE FADD MGC142515 Fas (TNFRSF6)-associated via death domain EMBV3_24210 TGATAAGATGGCCTCCGTGTTCTACACCCTTGTCATCCCAGCTCTCAACCCGCTCATCTA Gene GeneID:507721|LOC507721:XM_002691597:155_cdna Constitutive 0 NULL GeneID:507721 11 GENE LOC507721 NULL similar to olfactory receptor Olr434 EMBV3_29983 CTTGGAACCAAGCAGTTTTAGTTTTTAAAAGTACAGTGCCTTATTTATCCTTTTTGTTTT Gene GeneID:507668|LCOR:XM_002698412:349_cdna Constitutive 0 NULL GeneID:507668 26 GENE LCOR NULL ligand dependent nuclear receptor corepressor EMBV3_39318 TCTCCCAGAAGCTGTTCTATGACGACCAGCAGAAAGTGAATATGACGGACAACGTCAGGC Gene GeneID:280741|CA4:NM_173897:164_cdna Constitutive 0 NULL GeneID:280741 19 GENE CA4 NULL carbonic anhydrase IV EMBV3_16950 TAGAGGCAGGGTGGTACCCATTAAGCCATTATCCCTCCATCCTTTCTACCCCCACCTTCT Gene BVV0102_012964 - 1 EMBV3_41770 GK000026.2:41930656-42041589 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27441 CCATGGGGTCAAAAGGTACCTAAGTATATGATTGCAAGTGGAAAATAGGGGACAGAAATC Gene GeneID:326601|H3F3B:NM_001014389:11_cdna Constitutive 0 NULL GeneID:326601 16 GENE H3F3B H3F3A H3 histone, family 3B (H3.3B) EMBV3_24817 ACAGAACACGGGCACCCCTGCCGGAGACTGTGAACACCTTTTCTCTTTCTGAAGCATGTA Gene GeneID:281276|LDLR:NM_001166530:276_cdna UTR3_Alt 3 NULL GeneID:281276 7 GENE LDLR NULL low density lipoprotein receptor EMBV3_33459 GCTGCAGTAAGTACAAGCTCAGTTTTGTGCCACTTAGTTCATCTGTTAGCACAGTAGAAG Gene GeneID:514761|AP3M1:NM_001075680:311_cdna Constitutive 2 NULL GeneID:514761 28 GENE AP3M1 MGC137644 adaptor-related protein complex 3, mu 1 subunit EMBV3_02732 AAGCTCATAGACTTCTCACACAGGATAATGAGGGTGCTGGATCTTTACCCTGGACAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18693 ATTCTGATTCTGAAGATGAAGACAAAGCAGCTACCATGGTTTTGGAATACAGCGACCACG Variant GeneID:520143|EAPP:NM_001075800:26_cdna 383^500 3 EMBV3_42880 GeneID:520143 21 GENE EAPP MGC139672 E2F-associated phosphoprotein EMBV3_37266 CCGAGTATTAGTTGAAAGAAGTGCGGCCGAAACTGTAACCAAAGGAGGGATTATGCTTCC Gene GeneID:281833|HSPE1:NM_174346:61_cdna Constitutive 0 NULL GeneID:281833 2 GENE HSPE1 NULL heat shock 10kDa protein 1 (chaperonin 10) EMBV3_35539 AGGGGATGTCAGCCGTTTCCCTCCTGCCAGGCAATCTCGCTGCCAATGATCTCTCCACGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37008 TGGAGACAGAGGCACGGCCGCTCCTACAACAATCAAAGCTAGAGATTCCATGGATTTTGG Variant GeneID:618126|RNF175:XM_002694312:31_cdna 426^688 1 EMBV3_42386 GeneID:618126 17 GENE RNF175 NULL ring finger protein 175 EMBV3_05246 CCGAACTCCCTCACGAATTTCCGCAGGTGTCCAAGTCCCTTCCTCAAGCTGTAACTTGTA Gene BVV0102_021554 + 1 EMBV3_12343 GK000008.2:60409621-60427216 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21163 CACTGAATACAACCCAACCCAAGGAGTGAGCACCACCCTTGAACAAGCTGAAGCTGGTGC Variant GeneID:516107|RABL5:NM_001015612:191_cdna 155^447 2 EMBV3_14865 GeneID:516107 25 GENE RABL5 NULL RAB, member RAS oncogene family-like 5 EMBV3_33776 AGACTAGCCTGCGCTTTATACTAGGTACACAGACCTGGATTGCGCCACAGCTCCTGTTAT Gene BVT0102_095151 + 0 NULL GK000029.2:43189304-43190200 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35014 AGTGCTGAACATCCTCTTGGCCCACAAACAGTCTAACCAGCCCGCTGAAACCAACTCCAT Gene GeneID:533550|ZC3HC1:NM_001034591:179_cdna Constitutive 0 NULL GeneID:533550 4 GENE ZC3HC1 MGC127760 zinc finger, C3HC-type containing 1 EMBV3_18674 TTTTGGGGACGCCGTCAACAACACAGAGTGGCTCCGGCCATTGGATGTTGAATTTATGAA Variant GeneID:538801|SEPT4:NM_001034651:39_cdna 504^638 1 EMBV3_22878 GeneID:538801 19 GENE SEPT4 MGC127947 septin 4 EMBV3_20663 GCACATGAGTGTGTGGCTCAATTATGGCTTTCTAAAAACTGTTCTTCTGCATTGATACCA Gene BVT0102_086199 - 1 EMBV3_06492 GK000024.2:47102844-47150588 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23386 AGGTCCGGCTGATGCGGAACAAATCCTCAGCACTCCCTCAACATCCTGGGCCAGAAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30400 ACAAAGCAGAGAACCCAACTGAGTGAACTGGTGATCTGAATATATTGTATGTTATCTCTG Gene BVT0102_019649 + 0 NULL GK000019.2:48555129-48562411 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094240 TCONS_00094237 TCONS_00094238 1 XLOC_057389 Coding TCONS_00094240 XLOC_057389 Coding Coding TACO1 19:48552695-48558194 j TSS70527 3955 1 TCONS_00094240_2 175 0.184070796460177 4 0.28137504547108 5.56259255234604e-10 7.72070904392813e-11 3.7108640022506e-153 0 0 3.6172471994718e-06 1.35223953214943e-60 3.4074956154083e-05 9.96878509734355e-05 0.000127116468501682 0.000199552660798467 3.31018130003181e-11 0 0 1.59035242611381e-12 0.000971222107333236 0.000209887421020492 1.04877166838335e-08 5.17679737247636e-06 1.53591735083459e-05 7.67150166998974e-07 0.000426091944086717 7.28767778998675e-98 1.53522901743406e-13 1.05099787804636e-05 1.0072915663704e-10 2.27699084597661e-35 0.000119082103254737 0.00011996289860688 0.000235340044676671 NM_001205611.1 TACO1 Bos taurus translational activator of mitochondrially encoded cytochrome c oxidase I (TACO1), mRNA. 0.0 1564 100.00 0.218963337547408 NM_016360.3 TACO1 Homo sapiens translational activator of mitochondrially encoded cytochrome c oxidase I (TACO1), mRNA. 0.0 706 78.15 0.217699115044248 TCONS_00094240_2 sp|Q9BSH4|TACO1_HUMAN TACO1_HUMAN Translational activator of cytochrome c oxidase 1; 2e-103 303 86.98 0.96 1 coding 0 0 0 0 -0.231407286615663 0.0744857393622518 -0.0332933388171372 0.536159027385494 GCCATGCTATTCGATGAGGCCCAGAAAACCAAGGACATGTATTTGTTGTATGAGGGCCGAGGCCCCGGTGGCTCTTCTCTTCTCATCGAGGCATTATCTAACAGTAGCTCCAAGTGCCACTCGGACATCAAACATATCCTGAATAAGAATGGGGGAATGATGGCCGAAGGAGCTCGCCACTCCTTTGACAAAAAGGGGGTGATTGTGGTTGGAGAGGAGGACAGAGAGAAGAAACCTGTGAACCTAGAGCGTGCCCTGGAGCTGGCGATAGAAGCAGGAGCTGAGGATGTCGCGGAGACTGAAGACGAAGAGGAAAAGAACATTTTTAAATTTATTTGTGATGCCTCTTCACTGCATCAAGTGAGGAAGAAACTGGACTCCCTGGGCCTGTGTTCTGTGTCCTGTACACTAGAGTTCATCCCCAACACAAAGGTGCGGCTGGCTGACCCCGACCTGGAGCAGGCTGCCCATCTCATCCAGGCACTCGGCAACCATGATGACGTGATCCATGTCTATGACAACATTGAGTAGCCAGACTGTAGGTGCCTCCAGGCGGCCTATTCTGTAGCACAAGCTTCTGCAGCGTCCCCTAAGACTCAAGCAGATCGGGGGAGGGTGTGGGGCGGGGACCGTGCCTAGCAGGTTAGCAAGCATAGACCTGCAGTTTTGTGGTCAGCTGAATCCCTACATGTCCATGAAGCCTCTTTGTCAGCTCTGCTGGTGTCTGAGCCCTCCTGAGTGAGTCCCCCACATCCTTCTCGATGTGGGGGGTGTGGGCAGTCAGCTGGTCAAGTTCTGATCTCAGGAATCTGGCCCTTGGGACAGTAGGGGCCCTGAGGGCCCATGTACTAGAAACTACTCTTCAATAATAACAGTAATTATTGACCTGAGTAGCTGCCCTGCTGTTGTGTGACTTGAGTTTTCCTGGGTTTGTGTCCAGTTGGTGGGACCCTCTTGACTTTCTTTTAAGTCTGTGGGCTTAGTTCCACTACTCCAGTCCCAAGACTGTATTTTTTTTGATTGGCCATAGAAACGTGACTCGCTGCAGGTGCTTTGTGTTCTAGTGCTGGTCTAATGGCCTAAATCTGTCATTTTTTCACATACCTAATATCAATCAAACGCCTACTGTGTACCAGGAACTGTACTTACAAGCTGTTCAATTGATGCCTTGTGCTGGATTTGCTCTAAGACATTGGACCTCAGGGAGAAGACGCAGGATCTCTCTCTCCTGGAGCTGTCTGAGGGCAATGTGAACTGCTGTGCATGCATCCTTGTTCTCTTCCTGTGGCCTCTGTATCCTTCTTCTGCCAGAGAACTTAAGGCTCTAGCCCAGAGGGTGCAAATGTAAGGGACTCCCACGCCTTGCTTTGTCCAGGTCCCTCTGTGTTCTGAGTGCTTTCACTGCTGAGTGAACCTATCGGTGGGCTGCACTCGGGAAAAGAAACACCACGCTGGTTTTGAAAGCTGTCTGATGCCCAGAATGCCCGACTCTGGCCCCTCTTAATCCCTGATGCCAGTTGGATGATGGGGCACTGGGAACTGGAAAGGAAATGAGAACAGAAAGAAGGGTGAAGAGCTGAGTCAGGAGCCTGGCCAGATGGGAAATAGGAGCCATGGTACGTTTTGCTCCAAAGAGTCACTTCGAGGTTTAGAGACACCAGGAGTGCCAACCACCTGTGCTGGAGCCCATCAAGTATGTGGGGCCTGGAGTGGCTTTTTGATCCCGGTTATTCACCTTCTTATAAGTTGGTTAAGGCAGTTCTGAGCTCAGTGTAATTTTCCTGAAGGAGCCTTAGGTAAATTAGGATGGAAAAGAACTAAAACCAAATTGGCTCTAAGTGATAGCTTCACTTTCTAGGAAAAACAGATCGCTAATTCCACGATGACTTCAACAGCTGGAGAGTGAAGCCTGGGGGAAGAAAATCAATTAAATAATCCATTATGGTGCCAAGGCATGCGCTCTTATACCTCATTTCATAATGGAGGTACTACCTGGGATTTTTAGTTTTTATAGGAGATAACTCATCTAAATATCTGAATAGCACATCATTAAAACAGGGCAACATAAAGTTTAAATGCCACTTCCTAATTTATAAGATACTTTCATATTTTATTTATTTGACTTTCAAAACAAACCTATAAAATAGTCAGGCCAAGTATTTTATGCACAGATGATCTCATACCAAGCAGGTGAAAACTCTGTCTTGCATTCATAGACCTTGGTTTATAAAATAGCTTGGTTTTGTGAATGTTGAATATAGGTTAATTTGGAGAAATGTGATCATTTCTGATATGAGTAGTCTTGTACTAAGGAAGCCTGCTCGAGAGGGGAACTTGGTTACTCATGTGAAGTCCTCTGATCTAACAGATAGGATTTGTTACTGTGAATTCTGTAAACCAGTTTGTTTGCATCAAGACATTCTAGACAGCTCTACACTGACCCCTGGCGGTGCCCTGCAGTCTTCCTGCAGTTAATATGGGAAAGGCAGAAATGAAAGCTTTCTCAGACCTGTTCTGACTCTAGATCTGATAAAGACATCCTTAGCTACATAAGTTAAATTGTTAAATAGCTATTTAACTGAAAATTTAAGTAAAGATGGTATGAGCTGTTTTGCTACTAGAAATTACTTTTTAAAGAATATTTTATGTCAGAGAAAACATTTACAATATAATGTCAAATGAAAAAGATTAAAAACTGTATGTATAGTGTGGTCCAAATTTTAAAATATATATGATGTTGTATATATGAAATTTTAAGAAAAGACTAGAAGGAAGTATACCAGAATAGCAAAACTGATTATCTCTGGGTGGTGATGTTATAACTGAGTTTTATTTTCATGTATTACATTTATTATGGAAGCATTTTTTAAAAAGAAGAAAACTAGTCACGTTATCTTCCTACTAAGGAAGCAACATGTGAGCACCTGGGATTCAGGTGACCTTGAAGTCAAAAGAATGGGGTCTGGTCCTGGCTTGCCTTATCTTTGATTAGTGTCTTAACAACAAAATCATTTAGCACCTTGAGCTGGCTTGGGCTCACTTTCAAGTGTCCTTTCAGTGGGCTGGAAGTATCAGTGACAGGCTTTGTCCACAGCCTTGACTCTCACTGGGAAACGCTCATGTAGTATGTAGCTGCTGCACCTCTGCCAGGGGCCCCGGCTGAATCAGACTGGAACAGTGAGGGCTCTGCCTCCAGCTAACCATGGAAATTCAGTTGTGTGGTTACTTTTTTTTTTTTCTCTTGAAAACATATGACATAGATGTCATAGAGTTGTCTTGAGAATAAAATAAGTTAATATATGCTAAGCATTTAAAACAGTGCCTGGCAGTAGTAAGCATTCAATATATGTTGGCCTTTTTTCCCACTAAGTATGAATGAACATTTTTTTTAAACATTTTTTATTTTATATTGGAGTAGAGTCAGTTAACAATATTGTGATAATTTCAGGTGTACAACAAAGCAATTCAACCATCCATATACATGTATCCTGAGTGAACATTTTTAAAAACTGAAATGTGACCAGCCTGTATTTATCTGCTTTGTAACCTGTCCCCCACCTTCTCCTTCCCCTTCACAATATATCCTAGATGCCTTTTGGTATTGGGATGGAGAAGTCCACTTCTTTCTTTTTAGTAGCTACATGGTATTTTATTATTATTAATATGTGTCATAATTTATTTAATTAGTCTCTATCAATGGATATTTGGATTGTTTATCTTATAGAAGATGCTACAATGAATACTTTTTACCATTGCTGTCTTGCAAAGTATTCTTCACAATAAATTTATAGAAGTGGAATTACAAAACACAAAGCAGTTTTTCTTTAGACGTAAATGTCAATATGTAAAAATGTAAAGATGTAAAAACAAAGCAGAGAACCCAACTGAGTGAACTGGTGATCTGAATATATTGTATGTTATCTCTGAATTAAAAGAATGTTCATCGAATCACGTG EMBV3_31243 GTGCAGCGATGCCGTGCTTCCAACAATGGAGAATATCAAAGTCCAGGACCAGAAGATGAC Gene GeneID:533664|AP1AR:NM_001081532:65_cdna UTR3_Alt 3 NULL GeneID:533664 6 GENE AP1AR MGC155012 adaptor-related protein complex 1 associated regulatory protein EMBV3_07094 ATGCTTGGAGGAGGGGAGTTGTACGGAGTGAGTTGCCATTTTAGACTAGAGCCAGGCAGT Gene BVV0102_089896 + 0 NULL GK000011.2:29053250-29114908 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00030766 1 XLOC_017019 NonCoding TCONS_00030766 XLOC_017019 NonCoding NonCoding - 11:29074476-29075463 - TSS21765 987 1 TCONS_00030766_2 75 0.589665653495441 1 0 0.000634104994601828 0.000447954601085509 0 0 0.000155068382051419 3.62416655709205e-06 0 0 0.000399702759202231 0 0 0 2.90707515721256e-06 0 4.97081759037254e-06 0 0 0 2.90614809151141e-05 0 0 0 0 0 0.000175493367037394 0.000157041820673882 0 0 0 0 NR_036580.1 DPP10-AS1 Homo sapiens DPP10 antisense RNA 1 (DPP10-AS1), non-coding RNA. 7e-09 66.2 77.91 0.0861195542046606 0 noncoding AGCTGAAGTTGGTAGGGTCTCCCTCATCTACATGGTTCATGGATGTGATTAATGTTTGACTCTTGTCAAGTAGGGCTATAAGGAGGTTCCAAGAGGGGCCTTTGATTAGACTAAGAAAAGAGGAGGTGTGGGAAAATGTGTCTGAGAAGCTCATCCAGCACAAACATATTTGCTTGCAAAACTGTGAAATTGTTAAATTTATACCACACAAGACTGTTACTTAAAACATCATGGTAAAATTGCCTGCTGAATCAGAACAGAGAGCCTGACGCACCCCTTGCAGGAACATACGTGCTCAGCTGTAGGTCCCTGCCTCCTCCCTCCCCTGTACTCAGTATCTGTGTTTGCTAAGACCCTGTGCTGCTCTCTGTCCTGCGAGTTTCAGCTAGGATATGAGCTTCTATAATAACCATAAACTCTCAACAGAATGCAGGTGATAACTAAAGTAAAACAGCTATCTGAAGGCACTGGAGAGTGAACAAAAGCAGGCAGCTTCTGGTGAGGGGCCCATGCTTGGAGGAGGGGAGTTGTACAGAGTGAGTTGCCATTTTAGACTAGAGCCAGGCAGTCACTGTGGCACACAGGACAGTGGAGTGCTGATGGAACAACTGCTGTCTTTCTGGGGAACCAGAAGACTAAATATGGGGGAGCCACAGCTGCTGGAAGGGGCTCCAGAAGAGAGAGAGCTGGAGAAGAGATCCCCCAATTCTGTCTGTTCACATTGCTATTGGCTTTGAATCACACATACACAGAAAACCTGAAACCACTCTGCTGAGGGCAGACTGATTTGAGATTGGAGGTAGTGGCCAAAAAAGGATGCGTTGCAGTTTGAGTTCAACAAAGATGATTGCCTACTTTAAAAAGAAAAGAGAAAGAAGAAAGAAAACAAGTTTTAAAGAAAAGAAAGAATGTTTATCAGGGTAAAATAACATAATCCTGAGTCTCCGTAAATTAAAATTCATAATGCCCAGGATACAGTCCAAAATT TCONS_00024523 TCONS_00024526 TCONS_00024527 TCONS_00024528 TCONS_00024529 TCONS_00024530 TCONS_00024531 TCONS_00024532 TCONS_00024533 TCONS_00024536 . 3' 20179 TCONS_00024523 TCONS_00024526 TCONS_00024527 TCONS_00024528 TCONS_00024529 TCONS_00024530 TCONS_00024531 TCONS_00024532 TCONS_00024533 TCONS_00024536 . 3' 21165 EMBV3_06684 TAGCAGAAGGAACAGGAGCGCGCATTACCGCAGAAGAGCCTTCAGCGAAACTGACAAAGA Gene GeneID:510708|ADCY2:XM_002696432:52_cdna Constitutive 0 NULL GeneID:510708 20 GENE ADCY2 NULL adenylate cyclase 2 (brain) EMBV3_09607 GTTCGTAGACCGGTCAGGCCAACGGATTCCGGGAGGACGACATGCTGGATATGGCCCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01618 GGCCCCCAAGAGAGGTTCATTGAAGCCGAGCTGAGCGGCAGCCAGATGAGCCTGTCCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27699 ACAGTTCACCCTGGAGGTTTTCAGGGTTTAACGTGGGCATCTGTAGATTTCTCCATCTCT Gene GeneID:512888|TLE1:NM_001098020:44_cdna Constitutive 0 NULL GeneID:512888 8 GENE TLE1 MGC152075 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) EMBV3_37047 CCACCTAAATGGGCATGACAACCAGTTCTCCAGAGCCTCCAGGGATAGCATCATCACACA Gene BVT0102_398117 + 1 EMBV3_21625 GK000007.2:49101626-49155493 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213353 TCONS_00213351 TCONS_00213350 TCONS_00213352 1 XLOC_130433 Coding TCONS_00213352 XLOC_130433 Coding Coding SMAD5 7:49103649-49202775 j TSS159847 1269 1 TCONS_00213352_4 265 0.134751773049645 6 0.987258511979824 0.00684558235859459 0.00520274972743629 0.00286559798200491 0.0035539938432802 0.00295075683884107 0.00122301265974848 0.00316509287698664 0.00100821555676067 0.0028731069048461 0.00080630034870246 0.000367552486864489 0.000192828639220247 2.26264433436685e-130 0.001809894313903 0.000812588920923113 0.00323117038236052 0 4.91892594534117e-68 0.00261523008079913 0.00168544031809022 0.00319088243958155 3.39824476958414e-05 1.97591081776329e-21 0.000174913997923768 0.00464033431874775 0.00796071451670185 0.00263660182454552 4.81593744429611e-05 2.7073182963631e-05 0.000182638086854899 XM_005209390.1 SMAD5 PREDICTED: Bos taurus SMAD family member 5 (SMAD5), transcript 0.0 1707 100.00 0.74468085106383 NM_001001419.1 SMAD5 Homo sapiens SMAD family member 5 (SMAD5), transcript variant 2, 0.0 1442 93.86 0.743104806934594 TCONS_00213352_4 sp|Q99717|SMAD5_HUMAN SMAD5_HUMAN Mothers against decapentaplegic homolog 5; 2e-171 487 97.74 0.99622641509434 1 noncoding 0 0 1 1 -0.00598023016783673 0.953372942307192 0.00368147817898309 0.947564491246144 CACTCAATGCAGAGATGCCGGTTTGAGGATGGAGGGGGCCAAGTGAGAAGTCACACAGATGGCTCCCGGGAGCACGGAAGAGCCTCGCTGCCAGCCAACAGGCAACGGGGCCCTCAGACCTTCAACAGCCCCCACCTAAATGGGCATGACAACCAGTTCTCCAGAGCCTCCAGGGATAGCATCATCACACAGAGGCCCTTCCTGTCTCATGTCATTTCAGCTGCAGCAGAAATCGTCCTCCAGGTCGAGAGGGCTTGAACCAATGAAAGAAGCTTCTGGCACTTATGAAGATAAAGGTCACTCCTTCCTTTTAAATTGCAGCTTTTGCTTAGGGCCTGTATATGACTTTTCACCTGTCATCTGTATGTTCAGTAGACACTGACTTTGAGTTGCAGAAAGGTTTCTGAAGATTTAAATCAAATGACGTCAATGGCCAGCTTGTTTTCTTTTACTAGTCCAGCAGTAAAACGATTGTTGGGCTGGAAGCAAGGTGATGAAGAGGAGAAATGGGCAGAAAAGGCAGTTGATGCTTTGGTGAAAAAACTAAAAAAGAAAAAAGGTGCCATGGAGGAACTGGAGAAAGCCTTGAGCAGTCCAGGACAGCCCAGCAAATGTGTCACTATCCCCAGATCTTTAGATGGACGCCTGCAGGTTTCTCACAGAAAAGGCTTACCCCACGTTATATACTGTCGTGTTTGGCGCTGGCCTGATCTGCAGAGTCATCATGAGCTAAAGCCATTGGATATTTGTGAATTTCCTTTTGGATCTAAGCAAAAAGAAGTTTGTATCAACCCATACCACTATAAGAGAGTGGAGAGTCCAGTCTTACCTCCAGTATTAGTGCCTCGTCATAATGAATTCAATCCACAACACAGCCTTCTGGTTCAGTTTAGAAACTTAAGCCACAATGAACCGCACATGCCACAAAATGCAACGTTTCCTGATTCTTTCCATCAGCCCAACAACACTCCTTTTCCCTTATCTCCAAATAGTCCCTACCCGCCTTCCCCTGCTAGCAGCACATATCCCAACTCCCCAGCAAGTTCTGGACCAGGAAGTCCATTTCAGCTCCCAGCTGATACTCCTCCTCCTGCCTATATGCCACCAGATGATCAGATGGGTCAAGATAATTCCCAGCCCATGGATACAAGCAATAATATGATTCCTCAGATTATGCCAAGTATATCCAGCAGAGCTCCAAGACAGACACTCTACTAGTGCTGGATGAAGAATTTCCACGTGTCTCTTCCATCCATTGTGTCCATTAGG EMBV3_03189 CCTTGCTGTATAAGGTCTCCATGTCCCATCAGGTCTGTTTGGTGCTCTCTTTGGCTGCAT Gene GeneID:511657|LOC511657:XM_002699206:101_cdna Constitutive 0 NULL GeneID:511657 29 GENE LOC511657 NULL similar to seven transmembrane helix receptor EMBV3_09887 CAGAAAAATCTAGGGGTGGTGGGCGGGCAATGGGATTACTGCCTGCCAAATCGTCAAACA Gene GeneID:100138267|SENP3:XM_002695843:280_cdna Constitutive 0 NULL GeneID:100138267 19 GENE SENP3 NULL SUMO1/sentrin/SMT3 specific peptidase 3 EMBV3_18353 CAAGATTGTCTGGCACTGGGACCTGGCCACTTCTTAAATGCTGTCACTCCTGCTGAGATA Gene GeneID:527014|SV2B:NM_001083448:29_cdna UTR3_Alt 2 NULL GeneID:527014 21 GENE SV2B MGC139563 synaptic vesicle glycoprotein 2B EMBV3_31451 ATGTTGTGGGGACTGCATAACTTACCCAAGAAGTGACTGTGGGTTTGGAAGTGGCCTGCA Gene GeneID:618586|NKD1:NM_001105453:459_cdna Constitutive 0 NULL GeneID:618586 18 GENE NKD1 MGC165994 naked cuticle homolog 1 (Drosophila) EMBV3_10942 TTCTACCACGTGTGTTTCCAGCAGGAGCCAGATTCATGGACTTGGGCATATCTGAAGAGG Gene GeneID:529507|RAD51L3:NM_001046304:265_cdna Constitutive 0 NULL GeneID:529507 19 GENE RAD51L3 MGC138099 RAD51-like 3 (S. cerevisiae) EMBV3_21438 TGCAACTCTCCGGGCGGCCGCACCTGCCAGGCCACAGACCTCCACCAGCACGAAGTGGAC Variant GeneID:505844|KLHDC10:NM_001075227:155_cdna 420^506 1 EMBV3_39296 GeneID:505844 4 GENE KLHDC10 MGC151950 kelch domain containing 10 EMBV3_22162 CTGTTTATAAGATTATTTTCTGTTTAAAATTCCAGCCTTCCACCCATCCGCCGAGGCCTC Gene BVV0102_129587 + 0 NULL GK000004.2:71493057-71512353 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181995 TCONS_00181981 TCONS_00181986 TCONS_00181992 TCONS_00181994 TCONS_00181993 TCONS_00182001 TCONS_00181997 TCONS_00181979 TCONS_00181983 TCONS_00182000 TCONS_00181988 TCONS_00181982 TCONS_00181999 1 XLOC_110742 Coding TCONS_00182000 XLOC_110742 Coding Coding OSBPL3 4:71371823-71497119 j TSS136096 7055 1 TCONS_00182000_8 850 0.0148830616583983 22 0.943868470409833 1.57095964073523e-10 3.85073197878947e-09 0.000203668898204643 4.00662506701218e-06 4.58820787574913e-14 0.00014594516457358 9.28527842815629e-05 0.000346477981490646 1.72464624506611e-07 3.6865238473733e-06 6.48275798879187e-06 1.55340217986744e-25 1.17871809421315e-05 2.5156593203924e-28 5.69885694130225e-07 0.00147495957848429 0.000130434087268734 0.000807584144652985 0.00029188786698797 2.58512613490521e-07 0.000238765568754794 0.000729207834422556 2.48513801091489e-28 0.000878765943503226 0.00143678066149008 2.75101185306864e-06 1.45561943246204e-12 0.000145132096224821 1.40958793906695e-05 0.00011694650567999 XM_005205542.1 OSBPL3 PREDICTED: Bos taurus oxysterol binding protein-like 3 (OSBPL3), 0.0 1.132e+04 100.00 0.889440113394755 NM_145321.2 OSBPL3 Homo sapiens oxysterol binding protein-like 3 (OSBPL3), transcript 0.0 6114 81.48 0.888731396172927 TCONS_00182000_8 sp|Q9H4L5|OSBL3_HUMAN OSBL3_HUMAN Oxysterol-binding protein-related protein 3; 0.0 1613 89.73 0.998823529411765 3 coding 0 1 0 0 0.661267494063875 0.151466605490178 -0.0371594528360299 0.452231051483378 CCACTGCTTAAGCTATTGAAGAGAAATGCCAAGTGGGATTTCTTCTAGGGCATCCAAAATGCTTTTAAAACATATTGGATAAAAGCTGAGCCACCTGCCTGTCTGGGACTTCCATACTCCCTGCTCCACTGTCTTCTGATGGCATTCTGACTACACTGAGGCCAAGTGACACGCTATTCAGGATGAGTGATGAGAAGAGCCTTGCGGTATCCCAAAAATTGGTCTCACCTTCAAGGAGCACAAGCAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGACAGCTGGGAAGTGGTTGAAGGATTGAGGGGAGAGATGAATTACACCCAAGAGCCACCAATACAGAAAGGATTTTTGCTGAAAAAGAGAAAATGGCCCTTGAAAGGCTGGCATAAGAGATTCTTCTATCTGGACAGAGGAATCTTGAAATATGCCAAGAACCAAACTGACATAGAGAGAGAGAAGCTGCATGGCTGCATCGACGTCGGGCTCTCGGTGATGTCTGTGAAGAAATCATCCAAGTGCATAGACCTGGATACCGAGGAGCACATTTACCATCTGAAGGTGAAGTCAGAGGACGTCTTTGATGAGTGGGTATCCAAACTCCGCCACCACAGAATGTACCGTCAGAATGAAATCGCCATGTTTCCACACGAAGTTAATCATTTTTTCCCAGGATCTACAGTCCCAGACTCCGGTCCTGGAGTCATGGACACCATTTCAAGTAGGAAGCGTAGCAGTATATCAAAGCAGAATTCGTTTCAAACCGGAAGCAATTTATCATTTTCTTGTGGTGGTGAGACTCGAGTTCCATTATGGTTACAGTCTTCAGAGGACATGGAAAAATGCTCCAAAGACCTGGCACACTGTCATGCCTACCTGGTGGAGATGAGCCAGCTTCTGCAAAATATGGACATCCTGCATCGGACATATTCGGCACCAGCTATCAATGCCATCCAGGGTGGAGCTTTTGAAAGTCCCAAAAAGGAAAAAAGATCACACAGGAGGTGGCGGTCCAGAGCTCTTGGCAAAGACGCTAAAGGAACGCTGCAGGTACCTAAGCCTTTTTCTGGCCCAATAAGACTGCATTCCTCCAATCCTAATTTGTCTACACTAGATTTTGGAGAAGAGAAAAATTATTCTGATGGCTCTGAAACCTCATCAGAGTTTTCTAAAATGCAAGAGGATCTGTGTCATATTGCCCATAAAGTCTACTTCACTTTAAGGTCAGCTTTTAATACCATATCAACGGAGAGAGAGAAACTGAAGCAACTGATGGAGCAAGATGTTTCTGCCTCCCCCTCTGCCCAGGTCCTTGGTCTGAAGCATGCTCTGTCATCCGAAAACTCCAGAGATGATAGTCGGGCTCTGGTCCATCAGCTTTCCAATGAAAGCAGACTGTCCATCACTGACTCTCTCTCAGAGTTTTTTGATGCCCAGGAAGTTCTGTTGTCTCCAAGCTCTTCAGAAAATGAGATTTCTGAAGATGATTCATATGTCAGTGACATAAGTGACAACTTTTCCTTAGACAATCTCAGTAATGATCTGGATAATGAGAGACAGACTTTGGGGCCAGTGATCGACAGTGGGGGGGAGGCCAGGTCCAAAAGAAGGACGTGTTTGCCCGCGCCGTGCCCAAAGTCCAGTAACATCAGCTTGTGGAACATCCTGAGAAACAACATCGGGAAGGACCTGTCTAAGGTGGCCATGCCGGTGGAGCTCAATGAGCCCCTCAACACGCTGCAGAGGCTCTGCGAGGAGCTGGAGTACAGCGAACTCCTGGACAAGGCCGCCCAGCTGCCCAACGCCCTGGAAAGGATGGTGTATGTGGCAGCCTTTGCGGTGTCTGCATATGCATCTAGCTACTTTCGTGCCGGGAGTAAGCCTTTTAATCCGGTCCTTGGAGAAACATATGAATGTATTCGTGAGGACAAGGGCTTCCGGTTTTTTTCAGAACAGGTCAGCCACCATCCACCTATCTCTGCATGTCACGCTGAGTCTGCAAATTTTGTTTTCTGGCAAGATGTGAGATGGAAAAACAAATTCTGGGGCAAATCCATGGAAATCGTTCCCATTGGCACAACCCATGTGACTCTGCCAGCTTTTGGAGATCATTTTGAGTGGAACAAAGTGACCTCTTGCATCCACAACATCTTAAGTGGGCAGAGGTGGATCGAGCACTATGGAGAGATTGTCATCAAGAACCTGAATGATGATTCCTGCCACTGCAAAGTGAACTTTATAAAGGCGAAATACTGGAGCACTAACGCCCATGAGATTGAAGGTACAGTGTTTGACCAGAGTGGAAAAGCAGTACATCGGCTCTTCGGGAAATGGCACGAGAGCATCTACTGTGGCGGCTCCTCCTCATCCGCTTGCATCTGGAGAGCAAATCCCATGCCAAAAGGCTATGAGCAATATTATGGCTTCACACAGTTTGCACTAGAATTAAATGAAATGGATCCATTGTTAAAGTCTTTATTACCACCTACCGATACTCGATTCAGGCCAGATCAAAGGTTTCTAGAAGAAGGGAACTTAGAAGAAGCTGAAATACAAAAGCAGAGGATTGAACAGCTGCAGAGAGAAAGGCGGCGGGTCTTGGAAGAAAATAAGGTGGAGCACCAGCCGAGGTTTTTCAGGAAATCCATTGATGACTCTTGGGTGAGCAACGGCACCTACTTGGAACTTAGGAAAGATTTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAAGAGGAAAGAACAAGACATCTTTGTGCTTCTCCTGCATTTGCTTTCTGAAGCCACCGTCTTGTGTCTGTATATTTAAACAATATTATCTAGAATGATCACTTGTGCTTCTTAGCTTAGCGTTGTAAGTATTTAAGTATATATTTTCTTCAGTAGGTTTCTTTACAATTTCAAATGTTATCATGATTGTTTATATGAATGTAGAACACCTTGATATTTCTTTTTATATATAAACTATTTAATAAAAATAAAAGATTGAATGTTAATGTGTGGGTTAAAAAAGAAACTTTAACACTAATTTTCCAAAGGTTAGGAAAATTCTAATTAAATTTATGCCTTATAAAATTAGGTTGTAAAGAAAATCCATCTCTCCCAGGTGCATTAAGAAAAAAGAATACCTAGGGTTACTCACCCATGCATAAGCTACCCAGGTTTATTTTGGTAGCTCAGGTATCTTTTTGCCTCAGACAGCTTTTGAATTGCTCACACAGAACAATTCTGCTGGTGCTGGAGTCTGAAGAATACTCGTATTTGCATTTCAGTGACTGGAGAGAATGGTATAAGATGAGTGAGATATGTTTTTATATAAGATGGGTGTGGTACCTTCTCAAAGAGGGAAACATTTGAAGTCATCCCTCCCTATAGTTTCATTGCCTATGTGCAAAATCATACAGAGAAAGTGTTGATAATTTGAGAAATCCCTATTTTTTAAATATCATAATGAATTCCCAAACAGTAGGAAATTTCTCCTTAGAGTTAAATCATTACAAGTTAAAAAAACTGTTTTCCTACTCCACCCCAACCTCCCCCACTATTTGCCCACATCTCTGTTGAACGTGGAATGATCCAATTTAGTGTTAAAATACACAGGGGATTCCACATGGCAGTTTGACTTTCCAGAAGTTTAATAAAGTAGCTGATTGTTTTAAGTAACTCAACACATTTTCCTTAAATACTGTTTTGGTATTTTCTACCTCTTAATAAGCAATGTATTTTAGATCTTGTATTAAAAAGTTTGACCATCTGCCTTATAGAAAAATGTAGAGAGTTGAGTTCTTCCTTTGTGCTGTGTTCTGATAAAGCTTTAAATGTCTTCTTATCCCCTTCCTACACTTTCTTCTTAACTCATATCACTCATTTGTGAGTTTTGCAGCAGTCTTGAATGATACAGATTATAACTACCAAAAGGAGAAACTTTGCCTTTTTAAATGTGTTATTGCCAATTACAATAATAGAATATGTGCAGTAGTTGAATTCTGTGATCAAAGCAGTTCCAATTTCTGCCCGTATTACTTTAAAACCAAAGCTTGAGTTTTAAGCATTTTCCTCTAAAGTCCATAACAACCCTATGGGATATCAAGTAAAATGATGTGGTAAAAAAAAATTTCTCCAGAAAACATTTTTAGATATTTAAATAACATCAAAGAATGCTATGAGTGAAAAATCAAATAAGTAATGGGAAAAAGCATGCACTGTTTTTCAGTGTCACACAAACAACTAGTTAGAGAGTGTTCCATTTTCAAAATAGAGTTAAAGTGGATCACTAGCCTTTTGGAATCTGCAAGTGACTAGCATTTTAAAATAATATGCGATTCATTAAATATTGCTTTCATCCATTTCATTTTATCAAGACGTCGAGATGAACACAGTGAGAATATCATTTCCATTTCTAATGAAAATGATCAAATTCTTTGGTATGGGCTTTGTTCTTTTCTTTTCAAGCTTGTATCAGAATTCTGCTCACAGACAGGAAGAAGAGGCCTGTGGATTTTAAGGGTACTCCAGGGGAAAACAAATCTCATTTTCACAGTGTGAAGGTAAATGTAGAACTTGAGTAATACTGACTGCGGCAGAGGTTGGCTCAAAACAAGAACAAAACATGCAGCCTGAATGGATGTAGCTTTGTCATGAGGTCTTTGGCAAGTCTTTAATTGTCCCAGTTGCTATTTCAATTGATCTTATGTTTCATTTTGTAATCACAAGGATCAAGGGACCAAACATCACCTTTGTAGTCATTTAAGATGGGAGTGTGGATAAATTTGAATATGCATACCAATTTTAAAACCTATTAGTACCCACCTCTATAAAGGGTTTTTCTGACATTTAAATGGCTTGGTGATACATCCTATTATAATCCTCAAATTCCCTTGAGGGGGAAACAGCTTCTTTTTTCCTTCAGTCTCGACTCTCAAAAGCACCTTCTCAACCTAATTTGTATCTCAAGGACATTTTATAGTCTTAAGATGAAGGAAGCAAAAACATGGCATTGTTTGAGGACTGAGGCAGAACTGACTTTTCCAGATTTTGGATCTCCCAATTACATAATGCCAATCACTTCATCGCTGAAGGTACACGTTGTAACCTCTGTTTTATTCCTGGTCATCCCATCCCAAATGTATGGTGAACCACACCGCTGTTCTTGGAAATGGGACCGTGTGCAGTCCAGTTTCCCACATTACACCCCAGGTAACGTGGTGCTGCTGCCCCTGCTGGTCGTCCCAAGCTGCAAGAGATGCTTTTCAGGAAGGGGCCACAGTCTCCTGTGTAGCCAGGCAGATCACTCCCTCCCCAGGTCCCAAAGCCTAAGATGGTATTTCCTGGAGTGAAATGTAATAATCAAAGTCTCAGTGCAGCTTCTTTCTCCATGCCATTCACCTCCTAGAGGCCAGGCTGGTTCTGGTACTAACTAAACAGACGGAGTTCACTTTAAGACAACTGTCATTATCCCCACAGAATGCCCAGACAGCCCCCACAGCCTCATGTGCTTCCTATAGACTCTCTGGGAGAGTAAAATAGACAAACCATTCATTAAAAAAAATATTTACTTCATTTGGGCTGCTGCTTTTCTCACATCCTATTTTTAATTACTTCCAGTAAATCATTGACTTGGGCTTCAAGCACTGTCCTTCTGTGTTTTCCACATTTATGACGAGTGACCTTGTCCTACCATTAATAATGTCAACACTAAAAGAAAAATGATAAAGGTTCTGTTTGGTTGTTGAAACTTGTTGTAGGTCTAATACTTATTCTGTAAATTATATTATGCCTTCTGCTATCATAGAATTTTCTCAGACCTTTTAGTTATGAATAGGAGCAATAAGCAGTTGTATTGACATAATTTATTTAAATGTCTTTAATTTTGATATTAACATTGGCATAACTCTATTTTTGCTACCAAATGATAGCTATTTTCATGTGCTCAACTTTCCCTACATTGTATTAATCTGTTGCTTGGTGTTTGTCTCTATTTTTCTTTTTTGGAAATATAGACCATATAAGTATCTGCAAATTGCAGCAGTCTGAAATGCAAACCATTTTCAGGAACTTTGGTTTTGAGGAATGCAATGATCAGAGGTTGTTAATTTATTTGTGATGATTTTATCTTTGTCTCTTACCCTCAGAAGATACTATTTTTTTTAATGGATTTTGTAAATCTTTCATCTGTTTATAAGATTATTTTCTGTTTAAAATTCCAGCCTTCCACCCATCCGCCGAGGCCTCCCCCAAAAGCTCCAACTAATTTGCTTTTTCCCCACGTGTAGCTAGTTGACTGAATAAATAACATGGAAAAAGGCTGCCCCTGTCGTTGTGTTTCCAGGTTAATGGGCATATGTGGCTGTTGATGGGACAGAGCAAGACTCCAGCTGAGATTCTTGAGGGAGAAACACACAAGATTAACTAAAGTGATGGGGTTGGAAATAAAAAAAATACCCCAGGACCCAAAGAACCCTGGAAACTTTGGCAAAAGTTGCCATATTTTTGGTCTGAACATTTCCGAGATATACTGCAAATGTAGGTCCCCCACCATTGGGACAAGAACCTGAGGGGGGCAGCTGGAGCTCCACACAGCCCCCAAGAAGCCCTCTCTGTTCAACCCAGCATGTTATGGAAATATCATTATTTTTTGTGTGTCCTAACATGAAAAAGGGAAATGCTGACCACCCACACTAATTTAATGGCCCTGGTGAATGGCTGACTCATCTCCTCCTACACCCAAGTTGTGTCCTCTGCAATACCCTGAACACTGAGCCTTCCCTGAAGTTCCATTTGGTTTAGTTCACATGTTTACAGTGTCACACATACACTGGGCCGCAGAGTTACACACATGAAGTCTTTGCCTCCCCCAAAACACTAAAGAGACAACCAGAAGCCACTCATGAACCTTGATTGGATCCTGGCTTAAAAGAAAAACAAGCTATCAAATACATTTTGAGGACAGTAAGTGCAATTTGCATATAAGCATCATGAAATTATTGCTAACTTTCATATATGTATATGGCATTTGCCTGTTGATCTGTATCAAACCTGCCATTAAAGAAGG EMBV3_12123 CTCTGGGAGAAAAAATTTTTTTCAGTAAAAGGGTGATGGGATTTTATACCAATCACTATT Gene GeneID:519463|NEDD1:NM_001035333:1040_cdna Constitutive 3 NULL GeneID:519463 5 GENE NEDD1 MGC128761 neural precursor cell expressed, developmentally down-regulated 1 EMBV3_36608 CCAGGAGGCCCTTAATGGTCACAACACATCATGACATCCATGCACTCTCTCCTCCATTTC Gene GeneID:282653|AQP1:NM_174702:7_cdna Constitutive 0 NULL GeneID:282653 4 GENE AQP1 CHIP29 MGC129064 aquaporin 1 (Colton blood group) EMBV3_17696 AACCCCCGACTCTGTGGACTGCTGCTTCTGGTGACCTGGATTATAAGTGTCTTGCATTCA Gene GeneID:783313|LOC783313:XM_002698105:156_cdna Constitutive 0 NULL GeneID:783313 25 GENE LOC783313 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_12491 GTCTTTTGGACAACTACTCTGTGCTGGGCAATGTGTTAGATAATGTTCAGAGACACAGAG Gene BVT0102_159456 + 1 EMBV3_33516 GK000007.2:34649602-35557617 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220178 1 XLOC_133495 NonCoding TCONS_00220178 XLOC_133495 NonCoding NonCoding - 7:35379029-35379909 - TSS164176 880 1 TCONS_00220178_2 70 0.760227272727273 1 0 6.95746295594563e-05 1.14186705416668e-05 0 0 0.000126234626645466 0 1.65673246255653e-05 0.000174753651570548 3.88529623488423e-05 4.2505134927696e-07 0 0 0 0 0 0 0 0 0.000146678225479869 0.000122581138325714 3.99014315048333e-05 1.68651696739075e-06 0 0 9.27296473199703e-05 0.000268207715017667 0.000153691301168553 0 0 6.21100211744768e-07 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 850 88.44 0.75 0 noncoding 0 0 0 0 -0.381776280379304 0.0842310007136355 0.00575540927154883 0.92110738475309 TTGCCTGTGAATTCATATTTATTCCGAGCTCCCCCAAACAATGTTTAATATTCCTTTTTCTATGGTTCAGTTCAGTTCAGTCGCTTGGTCGTGTCCGACTCTTTGTGACCCCATGAACCGCAGCATGCCAGGCCTCCCTGTCCGTCACCTACTGCCAGAGTTGACTCAAACTCGTGTCCATTGAGTCGGTAATGCCATCCAATTATCCCATCTTCTGTCATCCCCTTCTCCTCCTGCCCTCAAACTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAGCTCTTTGATTCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAACAACCAGGACTGATCTCCCCTAGGATGGACTGGTTGGATCTCCTTGTAGTCCAAGGGATTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGTGCCCAGCTTTCTTTATAGTCCAACTCTCACATCCCTACATGACCACGGGAAAAACCATAGCCTTGACTAGACAGACCTTTGTTGACAAAGTAATGTCTCTGCTTTTTAATATGCTGTCTAGGTCATAACTTTCCTTCTAAGGAGTAAGTGTATTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGTCCAGAAAAATAAAGTCAGCCACTGTTTTCATTGTTTCCCCATCTATTTGCCATGAAGTGATGGGGCTGGATGCCATGATTAAAGCACTTCTAAAATGATACTGTAATTTGTCTCTTTCCATGTCAATTACACACATTGCAAAGGCTGACTTTTTATTCATCTCTGTGTCTCTGAACATTATCTAACACATTGCCCAGCACAGAGTAGTTGTCCAAAAGACATTAGCTGTTACA TCONS_00216430 . 3' 194065 TCONS_00216430 . 3' 194944 EMBV3_36562 GAGGCCACCCAGCCGGGATCTTACTTTAGGTGATGATGAAGGAATCCAAACTGACGAACT Variant GeneID:520712|C5H22ORF23:NM_001046253:73_cdna 170^281 1 EMBV3_22054 GeneID:520712 5 GENE C5H22ORF23 MGC133941 chromosome 22 open reading frame 23 ortholog EMBV3_27476 ATAGAAGGCGCTAAATGTACACAAAGCTTCCTGCGTGTCACGGCTTCTCCTGGAGCTGAT Gene BVT0102_420521 + 0 NULL GK000018.2:10825732-10845487 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31808 TTCCTACCCAGGAACATGAAATATCTCTCCATCTGTTTACACTTCTCCATCTGTATACAC Gene BVT0102_329433 + 1 EMBV3_03000 GK000016.2:894203-925080 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08738 TTCCTGTCCCCTCTGTCTCCCCCACGCCAACATATGGAGAAGAGTAATGGTCAGACTTAA Gene GeneID:538968|API5:NM_001144083:84_cdna Constitutive 0 NULL GeneID:538968 15 GENE API5 NULL apoptosis inhibitor 5 EMBV3_28104 GGAACCTACAGGACGGAGTATGCTCTCAACTCCATTAAAACAGATGTGCACAGTCCAGGC Gene GeneID:536741|MME:XM_002684999:113_cdna UTR3_Alt 2 NULL GeneID:536741 1 GENE MME NULL membrane metallo-endopeptidase EMBV3_07165 GTAGAGCCCTTGAAAACCCCTCCTGAACATTAAGCAGTTGGGGTGCTGATTTTCTTGTAC Gene GeneID:538981|CTTNBP2NL:XM_002686139:242_cdna Constitutive 0 NULL GeneID:538981 3 GENE CTTNBP2NL NULL CTTNBP2 N-terminal like EMBV3_19397 TACTGACACAGGGATAGATTGAAGGCAGAAGAAGAGGTCAGCAGACGACCAGATCGTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42876 TGAACCAGAACACGACCATCGCAAACGCATGGGGCTTAAGATGCTGCTGATGATGGGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31707 CTTGCCCTCCCTTCCTGATAGCCTAACTTAAAAACTAGCCCTGAATGCAGACTGACCTCT Gene GeneID:100124497|LOC100124497:NM_001102541:2_cdna UTR3_Alt 1 NULL GeneID:100124497 18 GENE LOC100124497 MGC148601 hypothetical protein LOC100124497 EMBV3_05895 TAGTTCACTAAGCTTGCAGGCATCAGAAGATTAATGCTAGAACCACCTGAAGGATGTAGG Gene GeneID:767826|ZNF181:NM_001076549:775_cdna Constitutive 0 NULL GeneID:767826 18 GENE ZNF181 MGC137353 zinc finger protein 181 EMBV3_10894 AGACCCCCCAGAGCGACCCTTAAGGCCGGAGACTGCGACTGTCAGTGCGGAATCAGTCGG Gene GeneID:531092|MMP25:XM_002697869:396_cdna Constitutive 0 NULL GeneID:531092 25 GENE MMP25 NULL similar to matrix metalloproteinase 25 preproprotein EMBV3_43527 GCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTTGGTATCTGCC Gene GeneID:536187|CAPRIN2:XM_002687720:25_cdna Constitutive 0 NULL GeneID:536187 5 GENE CAPRIN2 NULL caprin family member 2 EMBV3_03953 GGCCAGAGCACTGAGGAATTATGGAAGAACTGGGGAAATCATCAAAATCCGGAGAAAGCT Gene GeneID:616438|SPIC:NM_001076421:79_cdna Constitutive 1 NULL GeneID:616438 5 GENE SPIC NULL Spi-C transcription factor (Spi-1/PU.1 related) EMBV3_27541 TTTGCTCAAAGGAAGAACAGGCTGAGACTGGAGGCTGAATTGCAGAGGTTCCCCCACTGC Gene BVT0102_057983 + 0 NULL GK000021.2:25668497-25675906 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118918 TCONS_00118919 TCONS_00118920 TCONS_00118922 TCONS_00118923 TCONS_00118924 TCONS_00118921 1 XLOC_072765 Coding TCONS_00118923 XLOC_072765 Coding Coding MORF4L1 21:25651049-25671435 j TSS89190 4249 1 TCONS_00118923_2 323 0.0550717815956696 12 0.79215109148884 2.22863129524702e-07 0.000932317516471876 0.000562961446882758 0.000296325059616493 0.00106761975476768 0.000175272872647262 0.0004212601575926 0.000407693476337884 0.000822530423688279 1.90899628182685e-05 0.00017635401172739 1.71863615931142e-07 0.00024394164714278 0.000304840443890456 1.82073689468978e-05 0.00121985331039856 0.00196404176125945 0.00443767201244798 1.25840115110744e-07 0.000680874337391189 8.16925332196819e-12 0.00242807618847179 0.00142460425323867 0.00338529739798827 0.000742706782610688 0.000699177922974699 0.000454156602314937 3.36443131317331e-18 0.000605850711744806 0.000605126756879297 XM_005221886.1 MORF4L1 PREDICTED: Bos taurus mortality factor 4 like 1 (MORF4L1), 0.0 3268 100.00 0.426217933631443 NM_006791.3 MORF4L1 Homo sapiens mortality factor 4 like 1 (MORF4L1), transcript 0.0 2426 89.69 0.426923982113438 TCONS_00118923_2 sp|Q9UBU8|MO4L1_HUMAN MO4L1_HUMAN Mortality factor 4-like protein 1; 0.0 643 87.85 0.996904024767802 2 coding 0 0 1 1 -0.0186424893807825 0.887303944004786 0.0263479511054303 0.613937308187666 AGTTGCGCCGGTCGCGGTGCTGGGCGGTCTGTGGGCGCTGGCAAATCGGGCCCAGGATGTAGAGTTGGCGGTGCCTGACGGCGCGTCTGACGCGGAGCTGGGTGGGGTAGAGAGTAGGGGGCGGTAGTCAGGGGTGGTGGGAGAAGGAGGAGGCGGCGGCGGCGGTGGTAAATCTTTTATAAATGGCGCCGAAGCAGGACCCGAAGCCTAAATTCCAGGAGGGTGAGAGAGTGCTGTGCTTTCATGGGCCTCTTCTTTATGAAGCAAAGTGTGTAAAAGTTGCCATAAAGGATAAACAAGTCAAATACTTCATCCATTACAGTGGTTGGAATAAAAATTGGGATGAGTGGGTTCCAGAAAGCAGAGTACTCAAGTATGTGGATACCAACTTACAGAAACAGAGGGAACTTCAGAAAGCCAATCAGGAGCAGTATGCAGAGGGGAAGATGCGAGGGGCTGCCCCTGGAAAGAAAACTGCTGGGCTGCAGCAGAAAAATCTTGACGTGAAGACAAAAAAGAACAAACAGAAGACACCTGGAAATGGAGATGGTGGCAGCACCAGCGAGACACCTCAGCCTCCTCGCAAGAAAAGGGCTCGAGTAGATCCTACTGTTGAAAATGAAGAGACATTCATGAGCAGGGTTGAAGTAAAAGTCAAGATTCCCGAAGAACTGAAGCCATGGCTTGTCGATGACTGGGACTTAATTACCCGGCAAAAACAGCTCTTCTATCTTCCTGCCAAGAAGAACGTGGATTCTATTCTAGAGGATTATGCAAATTACAAGAAATCTCGAGGAAACACAGATAATAAGGAGTATGCAGTCAATGAGGTTGTGGCTGGGATAAAGGAGTACTTCAATGTGATGCTGGGCACTCAACTGCTCTACAAATTTGAGAGGCCGCAGTACGCTGAGATCCTTGCGGACCACCCTGATGCACCCATGTCCCAGGTGTACGGGGCGCCACATCTCCTGAGACTGTTTGTACGAATTGGAGCAATGTTGGCCTATACACCTCTGGATGAGAAGAGTCTTGCTTTATTACTGAATTATCTTCACGATTTCCTAAAGTACCTGGCAAAGAACTCTGCAACTTTGTTTAGTGCCAGTGATTATGAAGTGGCTCCCCCTGAGTACCATCGGAAAGCTGTGTGAGGCGCGTGTACCCACCCATGTTTGATCTCTGTAAACACCTTTTTGTTTCTTAGTCCTTCTCTTGTACAATGTACTTTGGAAATGTTCGTGTATAACAAAATTGATGTTTGTTTTCTGTTTGATTTTAAACAGAGAAAATAAAAGGAGTTACAGCTCCTTTTTTCTTTCCTTTTTTTCATTTCAAAGTTGCTACCAGTGTATTCAGTGATGGACAACAGAGAGACATACTGTAGAGTGTTTTATTGCTTAGTTGACAAAGCTGCTTTTGAACGCTGGTGGTTTCTATTCCTTTGACACTACGCACTTTTATAATATGTGTTAATGCTATATGACAGAATGCTCTGATTACTAGTGCCAAAGGTTCAATTCAGTGTATATAACTGAACACTCATACATTTGTGCTCCCCCCCTTTTTTTTATGGTGCTTAAAGTAAAGAGCCCATCCTTTGCGAGTCATCCATCCATGTTGTTCCTTAGGCATTTTATCTTTGCTCAGATTGTTGAAGAACGGTGGCTTGTTTCATGGTTTTTGTATTTGTGTCTAATGCACGTTTTAACATGATAGACGCAATGCATTGTGTAGCTACAGTTTTCTGGAAAAGTTAATCTTTTAGAAATTGTTTTTCAGATCTTCAATAAATTTTTCTTTAAATTTCAAGGAGCAGTGTACTTGTGTGGATGCATTACAGAACCTTTGTGTATTGTGTGTGTCTTCTTGTGTTCAGACAGTGATTTTTCTTTGAGGTGAGTGATTGTCTTGTTTTCTGTGGGATGCGAAGTTTGGCTTCCTGATCTGTCTTCAGTATCTACCTTCATCCGCCAGAGCAGCTTTGGTTGTCTGCTGTCTTGAATTCTGGCTGAAAAGTCAGAAGTTTGTATGACTATTTCTCTACTTTTCATGGAATGTAAATTTTGAGCGTTGAGGGAGTTTTTAGCTGTGTGACAGGTAGCCTTTTGCTAATTGTTTGAGGTGTTTACCAACATTATTCACAGTGCCTAAAATTTGAGCTCCTTCCCCCAACTTAAATACAGACCTCCTTGAGAGGGTTTGACGTGTGTTTCCTTGACCTCCCTCACCTTTGTTCTGTGGAAGTTCTTGAAGTCTCATCTCTGCTTCTAGGAGCATCCCATGATTTCCTTTCTGTTCCCCTGTACAGTCCAACCTGCCCCAGTGCCCAGGTATTCTTGGGAATGGTTACAAACCATAGAATCTACTGGCCAGAAGCTGGGCTTAAGCAGAGAGCTAGGCTCAGAGCTGTTTTTGTTCTTCCCCAGCTGTGTGACCGTCACTCACTGTCTGAGGCTTAGTCTGTTTTTGTCTGAGAAATGAGGTTAACACAACAATACCAGATAGTGGTTATGTACTGTTGACAGGTGAGTTGTCATTGTGATGAAGGAGCATGCTGTACTAAGTTGATCAGGCATGTTTGACTCTGTGACCTCATGGACTGTAGCCTGCCAAACTCCTCTGTCCATGGATTCTCCATACAGAAACACTGGAGAGGGCTGCCATGCTCTCCTTGATGAAGAATAGCTCTCATTTTACCCTGGTTGTCCTGGGACAGAATCAGTCAGCTCTGGGATCTTTTTCCCTCTTTGTGGCTTGGCAAAAAGATGGCTCAGCAGATGTGACTTTGCTCAAAGGAAGAACAGGCTGAGACTGGAGGCTGAATTGCAGAGGTTCCCCCACTGCTGACAAGGCCACCTCGTCAGCCTGGAAGCACCACTGTCAGCACAGACACCTCGAGGTTCCCTGCGCCGCCCCATCTGCATGGAACCTCTCGGCGTTCACCCTCAGCGTCCCCTGGTGAGTCAGGAAACCTTAGAAGGTTTGCACCTTTGCTGGTTTGAGGTTTTCCTGTCACCTATGCAGGTTAGAGGTGTGTGTGGGTGTCCAGAATGCCTCTGCATGGGAGCTTTCAACTGTCACTTGCACAGTAACCTCACGTGTTCTTTTACTCGTCGGAGACTTCATTGTCCAGGGGATTGGTGAGGTTCTCTGCCAGCAGGCTCAGCGTGGGGTTCACACATCCGTCTTCAAAGTTTTAGCAACTTCTTCAAATTCAATCCCACAAGAAAGGTCCCAGAGTAGTAGATGAGTACTTCCTTGTGTGCTCTTCACCTCTCAGATTTACCTCTTGTGTCTTTGTCACATTTTTGTGCACACATGCACTCTCCACAGAAAATCACTTTTATTTCTCTGAATCATTTGAAAGTAAAAATAATTGCATTTTTAAGTCTCAGTGCAAGATCCTGTGTGAGAAAAGCTGGACTAGAGATTTCATTATACACTAATTTATTGGAGGGGGCAGCAGATGGAGAGGGTTAACAGTATTCTCTGTCCAGAAATAGGGCACTGTTTTGAAAAAGGTAGGCCAGGTCAAGTTCACACTGATCTAGGAGCCAAATATTAAGCTAATTGGTTGAACTCAAGAGGGTTTTAAATGGCTCATGTGCAGTGAAGAGTATTGGGGAGCCTCCCTTCTCTCTTTCTCTGGCAAACCCTCAGAATAAGGAGAGGGGAGCAGGACCTCTTCAGGGGGCTCACAGGAGGGCGACAGATACACAGGTCATGTAGACTTCCTAAACAGCTTTGGGGAAAAAACACAACTCCTTAAATTCAATTCTAAGGGGAAGCTTCTTTATCCATAGAACGTAAGAGGTGTTGCCAACTGGTATGACCCACTTGGGCAGTTTTGGGCAGAAGAGCTGTGCCTCCCTCACCCCTCAGTCTCCTGTGACACATGATCATGTCTTTCATGTTTGTCTTGATTTGTCCAAAGTGGCAAGAAGGTCATTATTCCAGCTGGCTCTGGCCCTCTCTTAAACCCCTCCATCATGCTCAGGTAGCTCGGAAGTCCACTGTGCGCCCTGACCTCCCGCACCCCTGCGTTTGTAGTGCAGCCTGGGGGGAAGGCAGGTGGGTAAAGTGCCCCCTTGGCTGTGAGGTCTGGCAATAAAGCAGATACTGTATCTTAGTCCCTACAATGCCTTTGCTTATTTCTTAGCTCAACACCGGAATTGGAGAGGGATGCAATTAACAGCCCCAGGACTTTAGTTACAAAGATGTATGTGCCTTGCTGAAAGAAAGTCGA EMBV3_16264 TGATCGGCCTGGGCCTCGCCTTCACGGTGTACGCAATGCTGCTTAGCTCCTTCATCTGGT Gene GeneID:530507|TSPAN32:XM_002699447:162_cdna Constitutive 0 NULL GeneID:530507 29 GENE TSPAN32 NULL tetraspanin 32 EMBV3_01491 TATTGTTTAGAAAGCTGCCCAACTGCGAGAGAGGGTTGGTGAGACTGCTGGAAGTCAGAG Gene BVT0102_132620 + 0 NULL GK000014.2:4741653-5014129 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054443 1 XLOC_032252 NonCoding TCONS_00054443 XLOC_032252 NonCoding NonCoding - 14:4992372-4993474 - TSS40120 1102 2 TCONS_00054443_2 51 0.134301270417423 1 0 0 9.11835822372995e-06 0.000100769443111494 0 7.61634051682027e-05 0 0 0 0.00159664334789968 0 0 6.81392144606888e-05 0 0 4.45208855033201e-06 0 0 0 0 1.95773994286452e-05 0 0 0 0 1.25743739912629e-05 0.000342044046411373 0 0 0 0 XM_001254573.4 CCDC170 PREDICTED: Bos taurus coiled-coil domain containing 170 (CCDC170), 5e-31 140 82.76 0.127041742286751 0 noncoding CAGACCTTGTTTATTAAATCATTGATTCTGCCATTTTCTAACCTCAGACCTTAGATTTAAAACAGCAGTTCACCTTTGAGTTGTTTATTCGAATGGGGATCTATAAAAACTCTGACACAATTTCTGTGAGATATAGCATAGAGCCCTTAGCACATCTGCTCAAATAAGGGAGCTGTTATCACATTGTTAGAGAACAATAACATTCCAGTTTTCTTCTGTGCAGGGACTTGCACGGATGTGATCTTGTGACTCAGAGCAAAGGATGCTGACTGGGGAGCCGGGTTTCAGTGTGAGGCTGCCGGGGTCCTGGGCCTCGGGGCACCCAGGTCCTGGCAGAACCTGCTGGCATGGCCACCGTCTGCCTCCATGACTGCTTTCTCTGGGTGCTCCATGGACCAGCCTCTCCTGCTTTGCAAGTTCTCTCCCGTGCACGATGATGATAATGACTTTAGTTAGAATGGATGGCCATCCTTTCCCCTTCAGGTAGGAGGGAGGTCTCTGCTCTCATCCCTTCTTCATTCTTGGGGACAGCTCTCTGAGGAGCTCAGATCTTACTTATTACATTCAAACCCAGAAACAACTATGGCACTACCTCTGAAACCCCTGCCCAGGAAGTGCATTTTTTTCCTTTTCCTTTTGTACTGGGGTATAGCCGATTAACAATGTTGTGATAGTTTCAGGTGAACAGCAAAGGGACTCAGCCATACATAACACATGTGTCCATTTTCTCCCAAGCCCCGTCCCCCCCAGGCTTCCACAGAACACAGCAGAGTTCCAGGAAGCATGTATTCTGATGTAGGGCCCGGCAGTAGGACTCTCCGACTTCCAGCAGTCTCACCGATCCTCTCTCGCAGTTGGGGAGCTTTCTAAACAATATTTAAATTCAAGCTCTGCCTAGTCTTAGCTGATGATTTGGGGTGAGTCACTTCCCCAGGCTGGGCCTTTGCCAAGTCTCATCTCCCCACCTGGCAGGGCCTTTATGCATCATCTTGTCCAAACTCCTCATCTCGACAGATGAACAGTCACTCCGCCCCCGGCCCCATCACTCAGCAGCCCCACTGATCAGGCTGGGCCCCCCCTCACCCCTCTGCTGGAGAAGCGG TCONS_00051231 TCONS_00051232 TCONS_00051233 TCONS_00051234 TCONS_00051235 . 5' 161363 TCONS_00051231 TCONS_00051232 TCONS_00051233 TCONS_00051234 TCONS_00051235 . 5' 161363 EMBV3_01718 CATTTCATAACCACTAGTGTGCAGGTTGTCACAGTGCCTGCTGACAGGCTGCTGTGGTTT Gene BVV0102_104143 + 0 NULL GK000005.2:109656756-109664102 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196378 TCONS_00196382 TCONS_00196385 TCONS_00196379 TCONS_00196380 TCONS_00196384 TCONS_00193334 TCONS_00196383 TCONS_00196381 TCONS_00196386 2 XLOC_118324 XLOC_117439 Coding TCONS_00193334 XLOC_117439 NonCoding NonCoding - 5:109661900-109664083 - TSS144503 1815 3 TCONS_00193334_11 181 2 0.169110907424381 0.00144089876093949 0.00179357144208181 0.000933122015763932 4.79986953059848e-05 0.000516849530537046 0 0.000170229651368002 0.000341292656143028 0 6.24366904363277e-05 5.23226396399798e-05 0.000516728464489637 3.21987029579868e-05 4.29384664639807e-05 3.59590154030687e-81 0.00109082885586414 2.44711132557395e-05 0.00134169743673069 1.98801100519144e-05 0.00129227001236934 2.07715333807628e-172 0.000476351125559184 0.000195260255036066 6.48086200034806e-05 0.000261567022888716 1.95653545408851e-142 0.000548144132574097 6.165742294117e-05 0.000100151580872495 0.000403703755682127 XM_005207355.1 MICAL3 PREDICTED: Bos taurus microtubule associated monoxygenase, calponin and LIM domain containing 3 (MICAL3), transcript variant X2, mRNA. 0.0 2709 100.00 0.826997245179063 XM_005261257.1 MICAL3 PREDICTED: Homo sapiens microtubule associated monooxygenase, calponin and LIM domain containing 3 (MICAL3), transcript variant 9e-24 116 69.97 0.15702479338843 0 noncoding 0 0 0 0 -0.0794892771613948 0.690638601143315 0.0133230574132867 0.783013160651373 GAAACTTTTATTGCGCATAAAATGGCCCATTCCCCTTTGTAGGTCAGTTGTTTTCTGTAAACTCCACTTTCTGCCCTACTGAAAAAAATCCTGCTCTTTGGAAAGATCGGGAATAGCCTCTCATTGCTGGTCAGGGCAGCTGGAGGATGGCTCCTGGGGCAAAGGCCGGAAGATGCCATCTGAGCAGGCTGGGCCCTTGGCCTTGGCATGGGCTCACTCACACCCAGCGCTGCAGAGGGAGACTTCCTGCGGCCCTGCCCACGTGGGGACGCGACAGGAGCCATGCGTTCCCAGAGCTGGAAACCACAGCAGCCTGTCAGCAGGCACTGTGACAACCTGCACACTAGTGGTTATGAAATGGAGCGTTCAGGAAAAGTGCTCTACTGGAGCCTGAAGGCGCAGCACCGCGCAAGGGAGCTGGGGAGCGTTTCCGAGCTTCTCTGCAGCTCTGGGCCTTCCCCATGTTGGCAGGCACAGTGCGCTTCCGCGGGGCGGTGCCGCGTCCCTTCTGGCTACTTCATAAACCCGTCCTTGTCCCGGGTGGGCAGGGGCTTGCGGGACAGGCCTGGCAGTCATGGTGCACCGGGTGGTGGGTGGGAAGGGCTGGCAAAGGCCACACAGGCGATGAATCCTGTCCCAAGCCCAGCTTTATTGGAAGGCTGGGGTTTAAAGATGGAATCTAGAACACCCTCTGCTCCCCTGTTAAGAAAGGAGAACAGAAATAGAGGCTCTGCTTCAACAAGCAGGAAGTGAGGGTCCAAGCCACAAGCCCCCTGGATTCCAGGGGGTGACGGATGACCGCTTTGGGACAGACTCAAGAAGACAGTTCTCCGCTCCTTTGCAGTGAGAATGAATGTGTTCAAGTTGAGGCACGATGTGGTTCCCCAAGGACTTTCCGAGGCTGGTGTGGATGCCCCTCATCCTGCCTTTGCAGCTTCCCTTTCCAGCGTGTGGTCCTGCTCCACCAGGTGGGCTGGAGGGCCTCAGGACAGGCCGAGCTCCCCTGCAGACGGGCACGGCTGCTGCAGATTCTGACGGCTCTGGGAGCTGGACACGGTCAGCCCCTGGCCAAACCGCAGCTCGAGCTGGCTCCATGGTGCTTCTCATTCCGTGCCTCCCCACAAAGAGGTGTGAGCGGGGGGCTGAGCAGAAGCTGCCGCGCGCGCGCGCGTGTGTGTGTGTGTGTGTGTGACTCCCCGACCACAGTCCCGTCTGCGTGCTGTCACCACAGCTCCGGTTGGTGGGTCCGGGCCTCACCAAGCAGGGTACCTCATGCTGGTGCCGTGGCCTAAACCGTCTTCAGTCAATGTGGGAGATGAGACCTTGGCTCCAAAACGGAGAGAAACACGGGTCCTGTGGACCCGGGATTTCAACAGGGAGGATTCTGAGCAGTACCTGGCCAGCAGCCTGGCCTCTAGCAGCTCAAGTACATCCTTGATGAGTGAGCGGTGCAGACACGGACACCTGGGGCCAGGCACAGGGGATGGGAGCAGCGCACTGGGAATTAAAAGCAAATGCAGCAGCCGCAGGGCACAGCCAGGAGGCCTGGGGTGTGGGCTGGGCTTCTCGTCCACTTCTGCGTGGTGCCAGGGGAGCGTGGTCACTGCGTCCTCCCAGGCACCTTCCCTGGGCACGCCCCCACACTCTCACGCTCTGGAGTGGGCGGGCAGAGGGCTTCCTCCAAGGAGGCTGAACCGCTGGACAACCAGCTTCACCCAGGGCTCCCCACAGCTCGGATGCCTGAACCCTTCTCAGAGCCACGTGGACCTGAGTGCAAACTCCCCGGAGGCCCAGGCCCTCTCAGACCGGGGGTCT TCONS_00196386 TCONS_00196386 r 5' 0 TCONS_00196386 TCONS_00196386 r 5' 0 EMBV3_12359 GGAAGGGGGAATCAGCTCCAATCCTTGAGTTACAGCTTGCTCTCTTACGATGGAAGGGTT Gene GeneID:537539|ALDH9A1:NM_001046423:32_cdna Constitutive 0 NULL GeneID:537539 3 GENE ALDH9A1 MGC127331 aldehyde dehydrogenase 9 family, member A1 EMBV3_13946 TTGCAGGAGCAGATATGAGAATCCAAGTGTCATAGTCAACCAGGCATTAAGGAGACTTGC Gene BVV0102_004112 + 0 NULL GK000012.2:24745367-24794298 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26037 GTTTCTTAAAATGGGATCAAATCCGAATGCTCCAAGGTAGGCAGTGGGGGAGGTTGTGCG Gene GeneID:539971|KCNH2:NM_001099101:706_cdna Constitutive 0 NULL GeneID:539971 4 GENE KCNH2 MGC143108 potassium voltage-gated channel, subfamily H (eag-related), member 2 EMBV3_39589 GCTGCCTTTTTGCTTAATACTGAATATATGCTTGCCTAAATGGCTCCCAAATTGTGGGGG Gene BVV0102_178760 + 0 NULL GK000008.2:62420589-62434128 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227901 TCONS_00227902 TCONS_00227897 TCONS_00227898 TCONS_00227900 TCONS_00227899 TCONS_00227895 TCONS_00227903 TCONS_00227896 1 XLOC_138359 Coding TCONS_00227897 XLOC_138359 Coding Coding MCART1 8:62432809-62452126 j TSS170038 4907 1 TCONS_00227897_3 297 3 0.746117208531787 0.00154077830793801 0.000605015889124177 0.00197016310088073 0.000460452266891498 2.15567306309334e-10 0.000187634114231495 0.000976700894678494 0.000220336755054019 0.000473369499093986 3.82309192753613e-48 1.62113801077524e-12 1.01155818032188e-10 4.6483929854387e-06 3.15604453664915e-07 0.000192171517718902 9.33331683245834e-11 2.84740241730985e-16 4.41505889308565e-10 0.00162017114713843 0.0019975753006335 2.64698621379961e-05 0.000688432467349337 7.46072763236656e-05 0.00203481964277289 0.000827115983389773 0.00034281393570484 0.0024069731126042 3.04016793688991e-09 1.34187543467759e-15 4.55747437724899e-05 XM_005210177.1 MCART1 PREDICTED: Bos taurus mitochondrial carrier triple repeat 1 (MCART1), transcript variant X1, mRNA. 0.0 8585 100.00 0.969839005502344 NR_026541.1 LOC494141 Homo sapiens solute carrier family 25, member 51 pseudogene (LOC494141), transcript variant 1, non-coding RNA. 0.0 1582 78.76 0.373547992663542 TCONS_00227897_3 sp|Q9H1U9|S2551_HUMAN S2551_HUMAN Solute carrier family 25 member 51; 0.0 587 93.60 0.996632996632997 1 coding 0 0 0 0 -0.949389111720212 0.274996602854796 -0.0160823252075755 0.77798828530871 CCCGGGAGAGCGACGCTGGGACCGCTGAAGGGCCCTTGCTATCTCGGGGCCTGGGATTCCAGGACCTCTGGTTCCGTTGAATGTCAGGGACTGGAGAGGCCTGGACGATCCCGTCCACTCCCCTCCCCTCCCCCTTAACCACAGACCGGGGAAATGGACGCCAGGGAAGCGGGAAATCCAGTTATCACAGTTGACTCTGGAAAGTGAACCTAACAGGCCAGTAACAATGGAAGAAATCGAGAAGGTTTTTGTAAAGCTGCCCTCCCCCAAAACACCGGGCCCAGATGGCGTTTCAGGTTAGAAAAGTCCTTTGTGACGGAGAAAGATCTTAAGCAACATGATGGATTCAGAAGCTCATGAAAAGAGGCCCCCAATCCTAACATCTTCAAAGCAAGATATAGCACCTCATATTGCAACTGTTAGTGAAATGAAGCATTACCTGTGTGGCTGCTGTGCAGCATTCAACAACATAGCAATCACATTTCCCATTCAGAAGGTTCTCTTTCGGCAACAGCTGTATGGAATCAAAACCCGGGATGCGATACTTCAGTTGAGGAGGGACGGATTTCGAAACTTGTATCGCGGAATCCTCCCCCCATTAATGCAGAAGACAACCACACTGGCACTTATGTTTGGTCTATATGAGGATTTATCTTGCCTTCTCCGTAAGCATGTCAGTACCCCAGAGTTTGCAACCCGCAGCATGGCCGCAGTCCTTGCAGGGACAACAGAAGCAATTTTCACTCCACTGGAAAGAGTCCAAACATTGCTTCAGGACCACAGGCATCATGACAAATTTACAAACACTTACCAGGCTTTCAAGGCACTGAAATGCCATGGAATTCGAGAGTATTATCGAGGCTTGGTGCCCGTTCTCTTCCGTAACGGATTCAGCAATGTCCTTTTTTTTGGCCTTCGAGGTCCCATAAAGGAGCACCTGCCTACAGCAACGACTCACAGTGCTCATTTGGTCAATGATTTTATCTGTGGAGGCCTGTTGGGTGCCATGTTGGGAATCTTGTTTTTTCCAGTTAATGTTGTAAAAACTCGCATGCAGTCTCAAATCGGTGGGGAATTTCAGTCTTTCCCCAAGGTTTTCCAAAAAATCTGGCTAGAACGGGACAGGAAACTGACAAACCTTTTCCGAGGTGCCCATCTGAATTACCATCGGTCCCTCATCTCTTGGGGCATAATTAATGCAACTTATGAGTTCTTGTTAAAGATTATATGAAAGAAATTGGTTCAGTGCCATTTGTCGACTGAATAGACCTAAGATGGATGCAATTCGGCCTTGTTTCTAATGGGCCAAATACAAATTGGTGTCCATATCCAGGGCACAGTGAATTCTGGGCAAAGCTATTTTCCTTAAGCCCCAGCAAGTTCAGAATAAATGGTTTCAGTAGGAAAATTTAAAGGTTTTTTTTTTTTTTTTGAGCAGGGTGGGATTTTTAAAATCATTATCTGAGACCTTTAGGCTAGTTGCCTTATTACTAGCTGCTCTCATAGCTTTTGACAAGGAAACAAACAGCCAAGGTATGATTCTCTTTTCCAGAAGTCTTCTGTACTGAAACATAAGTGGCCATGACCAGCCAGAGAAAAGGCTCTTAGGGTCCCATGAATTCTCAAACTTCTGTTACTCCATTTCTTGCTTCTCTGCTCTTAGGAATTGCAAAGGGTAGTTTTTGTGAACTTAAGCATGTACATGGTAGAACAATGGAGCAGAACAGAGAAGAAAAATAGTTTATTATGTGTAGGCTTTTCATGATAAATTGCTTGTATTCATTTTGAAACTAAGCACCTCTTGTGATGTTCATTATCTGAGTTATTTGTCTAGACATGGTAGACTCAAGCATCTAAGGTTTGCTTTCTAGGGTTGAAAGTTTTCTCTGTAGTTCTGAACGTGACTTTAAACCTTTCCAAAATATTTTTATATTTCACTTATTTCATTGCCAAAAGATCTGGAGACTTAAATTTTGTTAATTTTGTTTCATCCCATTAAGTTTCATATTGCAGGTATCCCCCACTTTTCCAGAGTTTCTTTTATGCCACTTTGCTTTTACATAAGACCTACATTAGTACCTATTTTCACTAACCAAAAGTTGATTTTTGCTTTTACAAAAAGTAATTGCTTCTTCACTTTATACCATTTCGACTTACAAAAGGTTTCATGGGAATGCAGGGGAAACCTATAATTGTATTTCAGATCTAGCTCTGTTAAGCTCAACTTCTTTGAATTGTTTTTGCCAACTTAGTGAAGAACTTCGAAGTTTTTTTTCATTTTTCCTTTGAGTATTAGTTTGTCATTTTCAAGTATCCTATTCTCTTGAAACTCTCTTTAAAAAAACAACAAAGTGCTTCCATTGTATTTTGGAAGTCTATTAATCAGACCTCAGATTTTTTTTTTTTTTCTGGTTTCTAAGTGTTCCAGAGAAGGAGGAGAAAAAACTCAGGATAACTTTCACCCACAGTGTTAAGCTGTCTTTTTTATTTTACTCTTGGAAATAGAAACTTCTGTTAGGATCTTTACATTTTGGGAACTCAGTTTTACCATTTTATCATTTAAATAGTAAGACAGTTTAAGAGGATAAGGCTTAAATAAAGATATTTGAAATACTTTAAATTCAAGAAGTTGGTGATCGCTGGGTAGCATAGTTATCCCTTATCCTAACAGACAAAAATTTGCTTGTCAGAGGAATCAGATTTTAAAATATTTTCTTCCAGATAAAAAAGCAAAGTGGTTCTTTCAGTTGGTATTGAATAACTAGTAAAACATACCAGATACCCTAGAAAAATGGTTAATCAGTTTTTTAAAAATCCACATCTGTAAGTATTATGTAGTTAAGATTGCTTTCTAGCATTTGACATGGGCAGAGCACCTAGCTGTTATCACCAGTTTTTCATCTTTCTGGATAATTGCATGTGAATATGTGCACATGCTGACCAAAATAAATCCAGGGCCTCAAATGATAGTTTACTCAGTTTCTGGACAGATAGTCCAACAAAGATGTTTACCTCTCAGTGCAGGATGGCTGGTCAGGTGACAGGACCGTCGTCCTTCCGGCTGTGAAGGGTCGGGGGCGGTGTCAGGTGTTTGCCAGGTGGTAATGAAGCTCGCCAGCTTTACAGAGGCTCTTTGGGAATGTTGTGCTGGAAATGGCAGTTTATTCTAGAAACGAGGTGCAGGTGCAAGGATTTGAGAAAATAAGAATTTAACGCCAAATGAGAGTAGCATCTTTTGGCCTATGGAACAGTCAGGATTTAAAACAGATTGAATTTCAGGGATGGGTGGCAAAGGCATTGTGGTGCCTGAACCTCTCGTTCTCTTGTGTGTCCCATGCTCGGGGGCATATCTGGGTGCTCAGCGTGTGGTGGGCGAGTCAGCCTGGGGTCACGCCCTGGCCCTGACTCTCCTGGCGTTCAGTTCTACAGGGCTTCCTTTTGCCTATACACTCCATGTAGGTGATAGAAATCTAAATTCTAAAGCACTTTTGTGAAATAGAAGTGAAGTGAGAATTGGAAGGCTGCTTTGGTTTCTGCTGTCTCAAACGTGGCATTTAAAAACAATAAATATTTTTTAATGAATTTAACTCACTTTATTGATTTCTTTGTCACTTTTTACAGCTTTTGAAGACCAAACTGCAAATACATTACCAGGGATGGTTTTGTGTTGTCCTGTAGTTTCTTAAATTTGACAGAAAACTCAACAGAACTTTTGGTAGCCAACAGCTTTGTCTGAAATTTAAAAGAAGTCAAAATGTGTTATTAGTAAGTAAGAGATTCTAACTATTGTTTTTACCTTCAGTGTGAACTAGTATGGTAATAATTTTGAAAAGGCAAATAATGATCGAATGACTTTATCTGAAAAGCTTTAAAAGTGGCCTTTCTGTTACATATGTGGTGCAGACGGCTCAGAGCACAGGGCAGTTCGGGTCTTGCCTCCTATACTTCATTCTGATGCCACCAGAAATATGTTATAGAGTCTATACTAAACACCCTTAGAGTGGTATGAGCCCTCAGGACTGCACTACAGAGTAAACACAACCTCTATATGGTGGCAAGTGTGTCTTCATTTCTTTAGTGGTCAGAGATAGTTGGTGCTTTTGTCTCAACAGTTAATATTACATATAATTACCTGCTATATATTGTGAACTGTGCAATGAAACAGAACTGTGTGTATATAATCAGCTTTGGAGACCTGAAATTCCCTAGCTTGATAACATGGTGAGACTCAGTTATCAGGCAATACAGACCTTAAGATGACGACGACGGTGGTCCTGGAGGCCTTCACGGTAAGCCAGTCATACTGACCAAGACTATTCAGTGTAGGTGAAGTACTGTCGTGTGAGGGGTATGCAGTCAAAATGAAGGTGCAGTGGCGATCACATTTAAAGACAGGGTAAGCACTCAGACTTGACTCTTTGAAAATAATCTGTTTTCTCATGTGCTTATAAATGAGTATCAAAGACTTGAATAGGCATTCTCCTTAAATTTGAGGATTTTTAGTTTTTAATGCTGCCTTTTTGCCTAATACTGAATATATGCTTGCCTAAATGGCTCCCAAATTGTGGGGGAGTCTCTGTATGTTTCCTTTTTTAAAGTTTCATTATTAAAAGTGGTTAAGCACGCAAAGCTGGTTTTGTTTGATATTTTCAGTTTTGTGACTATATCAGTTTAAATGAAATTCTGTTAAATGTTTCAGAGGTAATGTGCTTCTTTTGGTATTTCTGTTTGGAATAAAGTTTTTTGTTTTTTTTTTTAAAGTCCTTTCTATTTGGTCTTCTCTTGTGGTTGGGTTATGGTTACTAGCACTTTCCTTTCTGTAGTAGGTTAGTCTCTTAGTCTTTTTCTTGGTAGAACATTTAGCATGCTACCTTGACTCTTAGTGACTCCACCTCATAACTTTGTAG EMBV3_35693 TTTGCGGGGCAAGGGTCTTGGGGGCAAAAGTTGGAGATGTTGTGATGGTGGATGGTTTCA Gene GeneID:785299|LOC785299:XM_002685023:191_cdna Constitutive 0 NULL GeneID:785299 1 GENE LOC785299 NULL similar to hCG2038415 EMBV3_27618 CGGTGCTGGTGGAAGATGTGAAATCCAGATAGCTCATGATTGCTGAGAGCTAGGCAGCTT Gene BVV0102_088258 - 0 NULL GK000003.2:16162187-16179332 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172186 TCONS_00172184 TCONS_00172183 TCONS_00172181 TCONS_00172182 TCONS_00172185 1 XLOC_104053 Coding TCONS_00172183 XLOC_104053 Coding Coding IL6R 3:16176998-16231747 j TSS128307 4863 1 TCONS_00172183_2 361 9 0.911339227003726 2.18511993672266e-05 0.000938803150917646 3.06880096508401e-06 2.99344512759285e-06 4.83763525589896e-16 6.18356565919929e-20 1.44604120875375e-36 3.62948212265844e-12 1.02580415053931e-08 3.71859054490372e-15 4.47074516684785e-07 1.95629069835787e-11 3.54629948611683e-09 6.85955428556878e-09 2.23505138003214e-12 0.0078699019435453 0.00442177858945668 0.00662449900509359 0 9.61661374271711e-11 1.23800738359265e-09 2.29568268871394e-13 2.2555037546024e-07 0.000802787757401773 4.34875178274482e-09 1.79499688771825e-11 2.10624481945852e-07 1.33341195827549e-93 0.000197048406712136 0.00109888287380807 NM_001110785.1 IL6R Bos taurus interleukin 6 receptor (IL6R), mRNA. 0.0 2619 100.00 0.298375488381657 NM_181359.2 IL6R Homo sapiens interleukin 6 receptor (IL6R), transcript variant 2, 0.0 1618 74.41 0.505038042360683 TCONS_00172183_2 sp|P08887|IL6RA_HUMAN IL6RA_HUMAN Interleukin-6 receptor subunit alpha; 2e-165 476 70.57 0.908587257617729 5 coding 0 0 1 1 0.0395666681897817 0.824870076524178 0.034394050355044 0.465105629527624 ATGGGGCATTAGGCGAGGAGGAAGCATGCTGGCCGTCCGCTGCGCGCTGCTGACCGCCCTCCTCGCCGCGTCCGGGACGGCGCTGGTCTTGAAGGGCTGCCCCGCGCTGGAGGTGGCGAGCGATGTGCTGACCAGCGTGCCAGGGGCCAATGTCACCCTGACCTGCCCAGGTGGGGGACCAGAGGACAATGCCACAGTTCACTGGGTGCTCAGGGATCAGATGACAGGCTCGCACCACGGCAGACCGGCTGGCGTGGGAAGGCGGCTGCTTTTGCAGTCCGTGCAGCTCAGCGACTCCGGAAACTATTCATGCTACCGGGAAGACCACCCAGCTGGGAGCGTGCGCTTGGTGGTGGATGTTCCCCCGGAGAAGCCCCAGATCTCCTGCATCCAGAAGAGCCCCCTCAGTAGAGTGAATTGTGAGTGGAGTCCTCGGAGCCCTCCATCCCTGACCACCAAGGCCGTGTTACTGGTGAAAAAGTTTCCGAAGCAAGTCTTCCAGGAGCCCTGCCAGTATTCCCCCGAGTCCCAGCGCTTCTCCTGCCAGTTGGCTGTCCCTGAGGGAGATAGCTCTTTCTACGTATTGTCCCTGTGTGTCGCCAACAGTGCCGGGAACAAGTCCAGCAACCCCCTAGGATTTGACGGCTACAAACTCCTACAGCCCGACCCACCCGTCAACATCACAGTCAGTGCCGTGGACAGAAACCCCCGCTGGCTCAGTGTCACCTGGCAGGACCCCCCCTCCTGGAACTCATATTACTACAGGCTACAGTTTGAGCTCCGATACCGGACTGAACGGTCAGAGACATTCACAACACTGATGCTGAAGGATCCGCAGTACCACTGCATCATCAATGATGCCTGGAGTGGCATGAGGCATGTGGTGCAGCTTCGGGCGCAGGAGGAATTTGGGAATGGCTTGTGGAGCGAGTGGAGCCCCGAGGTCACCGGCACCCCTTGGACAGAGTCCAGGAGTTCTACTACGACCAAGCTGCCCACCTCCACGCAGGCACCTACTACTACTGAAGATAATGAAAATATTTTCTCCAAAGATTCTGCAAAAACAACCAGCCTCCCAGGTTCAAGAAGACGGGGAAACTGCAGGCTCTGAAAGAAGGCAAGACAAGTGCACACCCGTCGTATTCTTTGGGCCAGCTGGTTCCTGAGAGGCCCAAGCCTACCCCAGCGCTTGTCCCCCTCATCTCCCCACCGGTGTCCCCCAGCAGCCTTGAATCTGACAACACATCGAGGAACAGCCGGCCGGATGCTAAGGGCCCTGGAAGCCCTTATGACGTCAGCAACAGAGACTACTTCTTCCCCAGATAATGGGTAGGCCTAGCAGCCTGGGGCGTCAGGCCCCTGGACTGTGTGGATGCTGAAACATAGACTGGCTTAGCACAAGTCGCTCCTCACTGCCATGCCAGCTTATCTCAGGTACTCGGGGCCTCTGGCTTCACCTTTACAGAAGCGCCTCACAGAAAATTCTATGCTGGGTGAAAAAAAAGATTTGCTGTGTTGGTTGAGTTTTGAATCACCCTGACCCCAATGCCCTGATTACAGGGTGAGAGTGAACTCAGGCCCCCGTGAAGAGATGGGTGTCAAGACTCTACTGGCCACTCAGGTGGGCAGAGCTGGGTGACTGGGGAGGTTTGGGACTGCCCCGGGGCTTTGGTGTGGATGAGCCACTGGCCATCCGCGCATCCCCGCCCACCACCAGGAGCGGCAACCTCAGACGGCTGGGATAGATTTCTAGCCAGACTCCCCAAGTCGCTTATGTCTTGACCCTCCTCTTCTAGCTCAAACTCTAGAAACCCAAGTGCCTTCAAAATTCCGTTTTTTCTAGGCCTGAGTGTGGGAGAAGGTTTCTTGTGCTTTTCTTTCCCCCGCAGCTGAGGTGGGGGCAGACAGTATCTCAGGGCCTGATGGTTTGAAATGGAATTATAATTAGTTCCTCATCAGCATTTTCTGAATGTGAATGGTCGTCCTAGGCACTTGCTGAATCCAGAAGCGAGTGCACTGGCTCGAGTTCCCTTTTTGGATCCCAGGACTTCAGGAGAGGAAGGAGGGGAGTGGGGCAGGGTCTCCAAGCTATCTGTAGTGGCATTGCTGAGGGGGCTGGAGGCCTCTGCACACCGTCCCCCCACTTCCCCGGTTCCCCAGAAGGAGAACTGGCATCAGGAAGGCTTCTGCCAGTTGTGAAATCAGCATTGCCTCGCTCCAGCTTTGTTTATTTTGTTTTCAACTGAGCCTGAGTAACCAGGGAAGATAATATTTATGCAAAAAGACAAAAGAACCTGGCAAGAATGGATTTTAATGTGGTTTTTAAAAAACTGCTGACTCTCTTATCTTCAGAGGGTAGAGCATCCAGTATTAGTTGAGAGTCGGTATATAAATAACAGGCGAAAGGCACAATGACTTTGTTTAGCATAAAACTGAATCAAGTGACAAAGGACGAGAAAAGATTTTCCCCTATAAGAGAAGAGACTCTGTTTTCATTCTAAATTTTGTTTTTGCCTTAAAAAGTAAAAAAAAAAAAAAGAGAGAGAGAGAAAAAACAACTCTGCCTCTTTTCTAATTTAGCGGAAAAGGCAGCTTGTTACTACTCCCCCAGGCGGTCGAGAAGGAAATGGTGTCCAGCTCCCAGGTCACAGTGCTGGGAAGCCAGCCTCCCACGATTACTCAGCAGGTCAGCTGAAAATCCCCACCACTGAAAGCCATGAATTCTCCGGTATCAGACGAGGTTCATTTAAAAAAAAAAATCCTAACCTTGATGCCTTCCTCTTTTTAGTTAGTTCCTTGAATGTGATTGTGTTCAGCGAGTATTGGAGCATCGACTGAACGTCGAGGCGTGACACTGTGCCAACCACTGCGGTGTACTTTTCTGTCTAGGCTTTGAAAATTCAGTAAGTTAGTGGTTACCTAGACAAGCACCCTCAAGTATCCTGGGAAGTCCCAGAAAGAAGCTGTGATTAAAATCTGTCGTGCAACCCACCACTAAAAATGTACCAGACCACAACACTTTTCTAGTAGTCTCCTGTTTTAGAAGAACAACCACCAGCACCAGACAGGTGGGAAAAGGACAGAAATGATCATGTTTTGTTTACTGTTTGCCGGGCTCAAGCTGTTATGACGTTGGGCGACATGGTGACTTTTCATTGCTGGCTTTGGCTGTAGCTTTCAGACTCTGTTGCTGCCTTTGGCAACTAATCTGAAGTTGACAAAAGTGAGGCAGGTGGTTTTGTTTTGTTTTTCTCTCAAGTTTTCGTGACTGAGACCAGCAAAAATGCTGTTAAAGGGAAATATAGAAAATGAGAATCTGCATGAGACAGGATGATTCTCTGCCCACAGTTAACTCTTGACAAAGTTTTACCCACGTGTAATATTAGCAGAGCCAGGCAGCGGTGCTGGTGGAAGATGTGAAATCCAGATAGCTCATGATTGCTGAGAGCTAGGCAGCTTTGATCTCCAAATTGTTATTGCTTTCATTATTATTTGAACGGAACTGCCTCCCCCCCCTTTATTTTTTTATAAGCTAGTATAGATGAAGGAAAAATATATGTCTTCTCTTGCTCAGTGTACATAGGTATACACCCTATGCTCTCTCTGTCTTTGAATCTATGGTCAGTGAATGTGTGTTTCAGTTCACAGGTCATTCTTACCTGTGTTTCTACAGCACACGTGTGATGCTACTCACCTAATACCTGTAGCAATCTGCTACACAGCCAGAAGGAAATGTTAGCCCAGCGACAATTTTTTATTACAGATGGACAGCTTATGCCGCTGGGTGGGAAACATTGAAAATATGCTAGTTCAGGGTTTCAGTTAAAGTGGTCATTAATTCTTGTAGCATTAATGAAAAAAAATTTTTGTTTTTAAGTGTCAAGGAAGTAGCGTTGACTGTTTCTGCAAAGCCTTCGGTAACTCTGAAAGCTCTTTGCCCTGATGGAGCCTTGCCCTTGGTAGTTTGTTTGTCAGGCTCTGGGCTCACCCCAGTCTCTGTCATTTGTCTGCTGTCCCCGAGGGAAGGACACACCATTACAAGGGGTGGGATCTGCTCCTGGAACGGATTGGGAGCCCACCTGGTGGGGAGCAGACCTCGGCTCAACAGAGCTCAGTGGGGCAGACTGGGGGTGGTCATGGTTTGTGGGTTTCCTGTAGAATGTTCAGGAATGTCTTGCCTGGCTGCTTTGGTTCTAGGCTATATCGCTTCATCAGAGGCACTTAAGATTGCCCCAGTTGGGGAGGAGTGTGACACCCAGCTCCAGATTGAGTTGGTAAGAAATCTGTCTTAATTTGGAGAAGCAGGGGCAACTGGTGGTTCCTGGGAGCATGAGCCTGGATCCCAGGCTCCCATGCAGCAGTTGGCAGCGGGGCTTTTGCCAAGCTGGCTCCACTTCTGTGCCAGACACTCCCGAGCATCCCCGAAAGGTCCTTCTAGCATCGCGTCCTCTGTGTAGCCTGGCTCCAGCACCAGCAAGTTTCTATGGCAACCTTAATGATGATTAAGGAACATTGTCAGATGTATGAACATATGCTCAAATGCAGATCTACTTCAGAAGGAAAGGATTGGAACAGCGTGTAGCAAGGCTGTTAATTAATAGAGAAACCGTATTTGGATGGAGAGCACACATCTGTTAAATAGAATACCTCAACTTTATGTTTTTCTGGAGAGAAATAATAGTTTTAAGTTTGGTGTTTTTTTTTTTAACCTAATTATCTGAAAGCAAATACCAAAGGCTGGTGATGTCTGTATATGGAGCAAAGGGTCAGTATAATTTTTTTCAGTGTTTTTTCTTTTAACCAGCTATTTTGCATTTAAAATGAAAATTGTAAATGTTTGAAATAAATAAGTTCCAAAAAATA EMBV3_32350 CTTGAACTCCTGCCCCCTGAATTGGCACTGCAGAGTCTTAACCACTGGACCATCAGGGAA Gene BVT0102_194439 + 0 NULL GK000027.2:32973440-32989773 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41695 CTCACCTCCCCAGGACAACCTCCAAGACCAGAAGGTAGGTTTTTCCCAGGTTTGCATGAA Gene BVT0101_002616 + 0 NULL GK000010.2:31109122-32328991 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016688 TCONS_00016689 1 XLOC_008890 NonCoding TCONS_00016689 XLOC_008890 NonCoding NonCoding LOC100847476 10:31761556-31867228 x TSS11583 3571 4 TCONS_00016689_7 56 0.636236348361803 5 0.966253749846221 0.0023953371607983 0.00268545612147855 0.00189532273434164 0.00123485740745012 0.00198778715712972 0.00089088349397641 0.00215731394614527 0.00214475972851908 0.00220528530568614 0.000109200703394759 2.61842989836934e-18 2.77256422490796e-05 0.000360021978891226 0.00198083551771373 0.00104824809817069 0 0 0 0.0022945166859058 0.0020444999069435 0.000148747227011279 0 0 0 0.00234550775060549 0.0029651002989058 0.00118394563914529 2.06189898780892e-08 1.0506420482608e-08 1.27495463043252e-08 XM_005228560.1 ZFP41 PREDICTED: Bos taurus ZFP41 zinc finger protein (ZFP41), partial 4e-107 394 77.80 0.142257070848502 XR_242265.1 C7orf63 PREDICTED: Homo sapiens chromosome 7 open reading frame 63 (C7orf63), transcript variant X7, misc_RNA. 1e-43 183 68.38 0.161299355922711 0 noncoding CCTCACCCTGTCTTTAAAAACCTGAAAGCCATTGGGGAGTTCGAGTCTTTTGAGCCTGAGCTGCACTTACTGCTTGCCTGGCCTTGTACTGAACGCGGCACTTTCCTTCACCACAACCTTCAGGAGATTGGCTTCACTGTGTGCCACCCATCCTCCAGTGTTCTGCGCCCCTGTCCTCACCCAGCCCACTCATTTGAGGTCTCCTTCAGCCACCAAAGCTACTTGGTGGAAGGGCTGGTGCCAATGAATATTAACCCCAATGGCAAAGGTTGGATCTGCTGGGGTGCCATCAAGGCAAAGTGAGAGCTGAGAAATGAGGATTTGCTTGTAGAACAGACCACTTTCAATCAGTTTGAAATCATCCAAGAATAAAGAACCGAGAATCAATCCCCAGACAAGATGGCAAAGTAGAAGGACTTGAGTTCATCCTCTCATGCAAAATCACAATCAACTGAACAACTGAGCAACTATTGACAGAAAACCTACTGAAAGACAATACTTCCAAAGACAAGCCACAAGATGGTAGAAAGGACACATTTACGATACAGTCAAATCCCATAGATACCGAGTGGGTGTCTCACAAACTAGAAAGTAATTTTATCACAGAGGTTCTCCTACAGGAGTGAGAGCTCTGAGCCCTATGTCAGGATCCCCCAGTGTGTGGGTTTGGCATCAGGGAGAGGGGCCTCCAGAGCATTTGACTTTGAAGGCCACTGGAGCTTGATCTCAGTAACTCCTCAGGACTGGGGGAAACAGAAATGCCACTCTTGGATGGTGAGTATAAGATCTGAAGCAGTTACTTCATGCGAACCTGGGAAAAACCTACCTTCTGGTCTTGGAGGTTGTCCTGGGGAGGTGAGGGTGGCTGTGGCTCACTGCAGGGACAAGTACACTGGAGGTAGAGGTTCTGGGAAGTTCTCATTAGTGTGAGCTGTCCTGAAAACTGCCATTTTCACATTGCACCAACACCTGGCCCCAGCCAACAGCCCAAATGTTCTAGTGCTGTGAAACCTCAGGCAAAACAACCAACAGGGTGGGAACACCCGCCCCCCACCAGCAAGCAGACAGACTGCTGCAAGTACTTCTGAGCCCACAGCCATCTCTAAACACAGTCCTGACCACCAGGGGGCAGGCACAAGAAGCAAGAAGAACGATAATCTTGAGCCTGTTCAGGGCCACAGACACAGAAAGTTAGAAAAAATGAGTTGGCAGTGAAGTGTGTTCCAGACGAAGGAACAACATAAAACCCCAGAAGAACAACTGAGTGAAGTGGATGGAGACAGGCAATCTACCTGAAAAATAATTCACACAAATGATACTAAGGATGAGCTAATTCAGAAAAACAATGAAGATAAAGACCAAGAAGATACAAGAAATATTTAACAAAGAGAAGATTTAAAGAACAGAGATGAACTGTACAATAACTGAAATGAAAAATAAACTAGAAGGAACCAATAGCAGAATAACTGAGGCAGAAGAACAAATAAGTAAGCTGAAAACAGAATGGTAGACATCATTGCCACAGAACAAAGAAAAAAGACACAGTAATCAAAGCATTACAGTTACTGGCACAAAACAGAAATATAGGTCAATGAAACTGTATAGAAAGCCTAGAAATAAACCCATACACCTACGGTCAATTTATGACAAAGGCGGCAAGAATATATGATGGAGAAAAGACAATGTCTTCAGTAAATGGTGCTGGGAAAACTGGACAGCTACATGTAAAAGAATGAAATTAGAACATTCTCTAATACTGTATGCAAAAATTAACTCAAAATGTATTAAAGTCCAAAATGTAAGACTGGATATTATAAGATGGAGGAAAACAGGCAGAACTCTCTGACGTAAATGTTGGCCATATCTTTTTGGTTCCACCTCCTAGAACAATGAAAATATAAACAAAAATAAACAGATGGGACCTAACTAAACTTAAAAGCTTTGCACAGCAAAGGAAATAAACAAAATGAAAAGACATCCCACAGAATGGAAGAAAATGCAAATAAAGCAACTGACAAAGGATTAATCTCCAAACTACGTAAACAGCTCAGGCAGCTCAATATCAAAATAACAGCCCAATTAAAAAATGGGCAGAAGACCTAAATAGACATTTCCCCCAATAAGGCATGCTGTGCTTACTAAGTCGCTTCAGTTCTGTCCGATTCTTTGTGACCCCATGGACTGTAGCCCACCAGGCTCCTCTATCTATAGAATTCAGATGGCCAGAAAGCACATAAAAATACATTCAACATTGCTAATTATTAGAAAATGCAAATAAAAACTACAGTGAGGTATCACCTCACTGGTCAGAATGGCCATCAAAACATGTGAACACTGTAAATGCTAGAGAGAATGTGGATCAAATGGAACCCTCCTACACTGTTGGTGGGAATGTAAATTGGCACATCCACTGTGGAGAACAGTATGGAGATTCCTTAAAAAATTAAAAATATGATCCAGCAGTCCCACTCCTTGGCATATATCTGGAGACAACCATTATTTGAAAAGATGCATGCTCCCCAATTTTCACTGAAGCACTATTTACAATATGTACAACTAAATCACTTTTCTGTACACCTGGCTGCCTCAGTTATTCTGAGCTGCCTAAATATCTATGGATGAATGAATGGATAAAGATGGGATACATATATACCATTTGCATCAAAATGGATGGATCAAGAGATTATCATAGTAAGATAGAGACAATTATATGATATCATGTATATGTGGAATCTAAAAAAAGATACAAATGAACTTATTTACAAAACAGATTCACATTCTTGGAAAACAAACTTATGATTAACTTATGGTTACCAAAGGGTAGTGATGAGGGGATAAATTAAGAGATTGAGATTAATATATACACTCTTCTAAATATGTAAAATTGGTAATCAACATGGACCTACTGTATAGCACAGTGAGCTCTATTTAATGTTCTATAATAACTTATCTGAAAAAGAATAGATTTATGTATGTGTATAATTTGGAGAAGGAAATGGCATCCCACTCCAATATTCTTGCCTGAGAAATCCATGGACAGAGGAGCCCGATGGGCTACAGTGCGTGGGGTCACAAAAGAGTCAGACAAGACTTAGCAACTAAACAACAGCAACAATATGTATAACTAAATCACTTTTCTATACACCTAAAACTAACAACATTGTAAATCAAATACACTCCACTATAAAATAACCTTTTTCCTTTAATCTGCCTATATGGTAAGTTATAGTTGTAAATTTAATAGCATTAAATCACACTGAAATTCCTGTAATAAATGTAATCACACCTTTTTTTATGTTTTTGTGGAAATTTTCATATAAATCCATGAATGAAACGGGCTTGTGATTTTCCTACTTTGAACTCCCTTTTTTATTTCAGAATTATACTAGTCTTATGATTTATAGTACCTTTTATTTTTATGTCCTCTGAAAAAATTTATATAAGATTGAAATGGTATGTTCCTTGAATGGTAGAATTTTCCAGGAAGATCATCTGGTTCTGGTTTTCAAATCTTTTAATGAACATAGAATATGTAGTTTTTCAATGTCTTTTCAAGTCATTTGTAATAAGT TCONS_00013381 r 5' 4281 TCONS_00013381 r 5' 4281 EMBV3_21760 GAGGAAAGCAAGAGTAGAGATGTCACTGCTGAAACCCTAAAGATTCAGGAATCCGAGGAG Gene GeneID:767960|MGC133619:NM_001077028:134_cdna Constitutive 0 NULL GeneID:767960 15 GENE MGC133619 NULL hypothetical protein MGC133619 EMBV3_17641 AATCTAAGTCCAGCTCTCGCCCCCGTAAGCCACCACCCCGGAAACACACTCGATCCTGGG Gene GeneID:532659|LRRC59:NM_001034578:129_cdna Constitutive 0 NULL GeneID:532659 19 GENE LRRC59 MGC139399 PRO1855 leucine rich repeat containing 59 EMBV3_19579 GTCGTCCAAGTGGCCCTGATGGGGCAGCAAGAGAACATATCCTTAGGCAGCTTCCAATTA Gene GeneID:534916|PHC3:XM_002684927:70_cdna Constitutive 0 NULL GeneID:534916 1 GENE PHC3 NULL polyhomeotic homolog 3 (Drosophila) EMBV3_35172 CCTTCCTGAGCTCTTTGGTCCTAACAACAAACAAGAATCAAACCTATAGTAAAGACAAGA Gene GeneID:614509|MXI1:NM_001076331:75_cdna Constitutive 2 NULL GeneID:614509 26 GENE MXI1 MGC140538 MAX interactor 1 EMBV3_05085 CTGCAGACCAAGGGTGCCCTGCAAAAGAAGCCGCTCTACGTGGCCTTTAGCTTTATGTAT Gene GeneID:539586|KCNK9:XM_002692575:262_cdna Constitutive 0 NULL GeneID:539586 14 GENE KCNK9 NULL potassium channel, subfamily K, member 9 EMBV3_16771 TGTCCTGTGAGGATCCGGGGGCAGAAAAAGGACATTAGGGGAAACTGAGGAGATGGGAAT Gene GeneID:100298356|LOC100298356:XM_002688576:275_cdna UTR3_Alt 3 NULL GeneID:100298356 7 GENE LOC100298356 NULL similar to bone marrow stromal cell antigen 2 EMBV3_00016 GAAAGCCCCATTGCCTCATGGCACAGATGAGGGTATTACAGCCCAGAGAGATAGAATGAC Gene GeneID:531678|MGC139528:NM_001099049:45_cdna Constitutive 0 NULL GeneID:531678 X GENE MGC139528 NULL hypothetical LOC531678 EMBV3_02193 TACCGCCATGTGGCTGCTGGTGATTGTCATTGTGGTACCTCTGGTTGTTTCTCAGTATGG Gene GeneID:538837|GPR141:XM_002686815:20_cdna Constitutive 0 NULL GeneID:538837 4 GENE GPR141 NULL G protein-coupled receptor 141 EMBV3_07490 GTCACCTCCAACAACATCCGCGAGATCGAGGGCAATGTATTTATGTATTATGGACTGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30730 GGCCAGCTGTGAGTGTTTCTTTGGCAGTGTCTTAGCTGGTTGTTGTGAGTAATAATGCAG Gene GeneID:100170930|MIR34A:NR_030786:2_cdna Constitutive 0 NULL GeneID:100170930 16 GENE MIR34A MIRN34A bta-mir-34a microRNA mir-34a EMBV3_14238 TTTTCATTCTCCCCGTATACCTCTTCCCTAATGGCCTACTGACCTGCCCTGGAGGGATGT Gene GeneID:616423|MGC134282:NM_001038581:118_cdna Constitutive 0 NULL GeneID:616423 29 GENE MGC134282 NULL hypothetical protein LOC616423 EMBV3_43681 CTGTTTGACCGAACGGGGGATGGCAAGATCCTGCAGACTGTGGCCAAGAACAAGGACCAG Variant GeneID:281341|MYL6:NM_175780:893_cdna 112^249 10 EMBV3_03199 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_36763 CCATGGAAATGGAGTTAAGCAAGCATTACCAGGCCCACGTGCAGGGAGAACTTTGTAGGA Gene GeneID:533051|MICB:NM_001127317:159_cdna Constitutive 0 NULL GeneID:533051 23 GENE MICB Bota-MIC1 MHC class I polypeptide-related sequence B EMBV3_34042 CAATTTACATTCCCACCGACAGCATAGGAGGGTTCCTTTTTCTCCACACCCTCTGCAGCA Gene BVV0102_176659 - 1 EMBV3_05029 GK000003.2:3319167-3425058 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175128 1 XLOC_104911 NonCoding TCONS_00175128 XLOC_104911 NonCoding NonCoding - 3:3416236-3417286 - TSS129887 1050 4 TCONS_00175128_1 37 0.54952380952381 1 0 0.000738595683430427 0.000344517305220234 0.000370160568881175 7.90871626477413e-06 2.82124796295098e-05 0.000173742837793668 6.10941195280603e-05 9.57620426960938e-05 0.00101444546065487 0 0 0 2.73265187193709e-06 0 0.000182230388416649 0 0 0 0.000266348966261357 0.00038696693361478 5.49322777298803e-05 0 0 0 0.00316070439771365 0.000543508281910788 6.13815681234901e-05 0 0 0 XR_232761.1 LOC786451 PREDICTED: Bos taurus F-box only protein 16-like (LOC786451), 1e-63 248 80.59 0.257142857142857 XR_246212.1 PGBD2 PREDICTED: Homo sapiens piggyBac transposable element derived 2 (PGBD2), transcript variant X2, misc_RNA. 2e-29 134 78.98 0.148571428571429 0 noncoding 0 0 0 0 -0.160932666395094 0.193560358266344 0.00138496089861244 0.979546935338089 ACTGATGCTGAAGCTGAAGCTCCAATCCTTTGGCCACCTGATGCGAAGAGCTGACTCATTGGAAAAGACACTGATGCTGGGAAAGACTGAGGCAAAAGGACAAGGGGGAAGCAGATGATAAGAAGGTTAGATAGCATCACCGACTCAATGGACATGAGTCTGAGCAAACTCTGGGAGACAATGGAGGTCAGAGGAGAGAGTTGAGTCCTGGTGACCTACCATCCATGGGGTTGCAAACAGTTGGAGACGACTGAATGACTGAGCAACAACATCAAGTATTCCATTGTATATATGTACTACATCTTCTTTATCCGTTTCTTTCAGTGGACATTTGGGTTGCTTCCATGTTTTGGATGCTGTAAAACATGGCTGTGAACATTGGGGTGCGTGTATCTTTCCGAACTACAGTTTTCTCCAGGCACATGCTCAGGAGTGGCATTGCTGGATCACACGGTAGCTCTATTTTTAATTTTTGAGGAGCCTCCACACTTCTCTCCATAGCGGCTGCACCAATTTACATTCCCACCGACAGCATAGGAGGGTTCCTTTTTCTCCACACCCTCTGCAGCATTTATAATTTGTAGACTTTTTGTTGACCTTTTGGACCAAGTGCTAACCTCTTTCAATGTTAGTTTTCTTATTCATCCAACGGGGGACTAATTTCCTTCAAAGTTGTGGCAAGGCTTTGTGAGTTGGTTATTAGATGCTGCTCTGTGTCCAGACGTCTCCTGCTCAGGTGGGCCCTGTGTTTGAGGAAGTGTGAGGTGCTGGGTGGAGTCGTGTACACTGTTCCCAGAACGTGCCCTCAGCCCTGTTGTGGTCTTGACATCTCAGAGACAGCCGCTCTTGTAGATGAAGCAGAGGGTTCTTCCCACAGCCAGGGTTTGGTCTGCTCATTCTCAAAGACCTGGCAGGAAGAGGAACTCCAACAGGAGTGGGTGGGCACTGGGAGGGTGATGAGACACTGATCCACAGTTTTACCCCTTTGTAAATCTCAGGCACACAGGTTAAATTACTCATATCTCTCAATAAATTGAACCTCACCATCAT TCONS_00171774 . 3' 7618 TCONS_00171774 . 3' 8667 EMBV3_27402 TGGTGCAGTCTTATAGATGTCTGGGGCAAATACTTCGAAAGCGGTGTAGGAACGAAGCCC Gene BVT0102_323795 + 0 NULL GK000001.2:6174156-6199820 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33422 CCGGGGTGGTCCAGAAAAGCATGAAGTTACTGGCTGGGTGCTGGTATCTCCTCTTAGTAA Gene GeneID:616368|IGFBP7:NM_001102300:143_cdna Constitutive 0 NULL GeneID:616368 6 GENE IGFBP7 MGC148810 insulin-like growth factor binding protein 7 EMBV3_33659 CTGCAGCTCCAAAGGTCTGGTGTCAGATGGGGTTTGTTTGGTTCTGTTTTTGTTTGGGGT Gene GeneID:540026|LOC540026:XR_083863:44_cdna Constitutive 0 NULL GeneID:540026 15 PSEUDO LOC540026 NULL similar to Rho guanine nucleotide exchange factor (GEF) 17 EMBV3_06420 TTCGCAAACCCATTAACCTGCCAGTTGTGAAAAAAAGGTGGCAGGAGAGAGAACCAGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27866 ACCCATGCTGCAGACTGTGGCCAAGAACAAGGACACTGCACCTTCCTTGTGGGAGATTGT Variant GeneID:281341|MYL6:NM_175780:893_cdna 273^550 10 EMBV3_26511 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_06708 TCAGGCTGGTGGAAAGGCGATAAGAAATGTAGAATGGGAACCGCTATGAAGGCAATTGGC Variant GeneID:531482|MORN3:NM_001040550:219_cdna 491^650 1 EMBV3_23377 GeneID:531482 17 GENE MORN3 MGC134003 MORN repeat containing 3 EMBV3_11235 AACTGAAACTAATTTGGATACAGGAAAAAGGTCTCACAGAAATCTCTTCTTATCTAAGTT Variant GeneID:519474|TERF1:NM_001076865:31_cdna 915^974 5 EMBV3_04957 GeneID:519474 14 GENE TERF1 NULL telomeric repeat binding factor (NIMA-interacting) 1 EMBV3_00727 TCAGATTCTTAACTGGGAACCCCCCGAAATCTCCTAGAGTAACTGTGATGCCTGGACAAG Gene GeneID:522351|CDSN:NM_001077950:144_cdna Constitutive 0 NULL GeneID:522351 23 GENE CDSN NULL corneodesmosin EMBV3_26254 GCGATTATGCAAGACGAGGAAGAAGTGGAGAGCTCGGGGTAGGACATGTGGTCAGATCTT Gene GeneID:100294868|LOC100294868:XM_002686697:154_cdna Constitutive 0 NULL GeneID:100294868 4 GENE LOC100294868 NULL hypothetical protein LOC100294868 EMBV3_27266 AGGGCGGCTTAACCATTCATCGTCAGGAGACAAGGAGGCCATGGATTTGCTCTGGATTCT Gene GeneID:352960|TRIB2:NM_178317:45_cdna UTR3_Alt 2 NULL GeneID:352960 11 GENE TRIB2 TRB-2 TRB2 tribbles homolog 2 (Drosophila) EMBV3_40184 CAGGTGTGTGACCTGAATAGCTATAGGTGGTCTGTTTTCTAGTTGAGAATTGATTTGTGC Gene BVT0102_107143 + 1 EMBV3_36649 GK000004.2:87919209-88193846 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33797 CTTCCGGGAGAATGGCCGAAACTGTAAGAGGGAGCGAGATGCCCGTGTGAAGAGGAAACT Gene GeneID:526448|TBX6:XM_002698057:17_cdna Constitutive 0 NULL GeneID:526448 25 GENE TBX6 NULL T-box 6 EMBV3_13296 ATCATCCACTCCTATAGTTGGTGCCAAGTGGTAATTCTCTATTTCAATCATTTCCTCTCC Gene BVT0102_343153 + 1 EMBV3_05647 GK000028.2:29546126-29552048 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160539 TCONS_00160540 TCONS_00160543 TCONS_00160545 TCONS_00160537 TCONS_00160541 TCONS_00160542 TCONS_00160546 TCONS_00160538 TCONS_00160544 1 XLOC_097680 Coding TCONS_00160542 XLOC_097680 Coding Coding ANXA7 28:29548403-29573976 j TSS120027 5425 1 TCONS_00160542_2 463 0.393917050691244 13 0.788362271234162 0.00074671048761175 0.000354815645452165 4.06871881283745e-11 7.22337495575884e-33 0.000421991895288068 1.45130826023267e-08 0.000174965050017834 4.98293391194493e-13 2.97516169869332e-07 1.30268586920167e-08 1.55251734202151e-05 5.61599466419451e-05 4.14530259731331e-10 0.00020283160501687 0.000134790090471718 0.00353853519361961 5.60285735372128e-15 1.11980739566291e-17 0.00064148704137893 0.000101618080506791 0.000311414269133264 0.00156294130954417 0.000414853326234508 8.89743677384915e-05 0.000301000960529254 0.000843587439602877 0.000271101938620608 6.40134245632762e-06 9.27402807786162e-05 0.000204093653020707 XM_005226417.1 ANXA7 PREDICTED: Bos taurus annexin A7 (ANXA7), transcript variant X2, 0.0 9459 100.00 0.966635944700461 NM_001156.3 ANXA7 Homo sapiens annexin A7 (ANXA7), transcript variant 1, mRNA. 0.0 2401 86.34 0.372534562211982 TCONS_00160542_2 sp|P20072|ANXA7_BOVIN ANXA7_BOVIN Annexin A7; 0.0 938 100.00 0.997840172786177 1 coding 0 0 1 1 0.0279967701459548 0.825006797477289 0.0133824507731377 0.819812619659936 GGTTGGGCCGTGACGCTGCTCCGCGGGGTCAGAATGTCATACCCAGGCTATCCGCCCACAGGCTACCCACCTTTCCCTGGATATCCCCCTACGGGTCAGGAGTCATCTTTCCCCCCTCCTGGTCAGTATCCTTATCCTAGTGGTTTCCCTCCGATGGGAGGAGGTGCCTACCCACCAGCACCAAGTAGTGGCTACCCAGGAGCTGGAGGCTACCCTGCCCCTGGTGGCTATCCAGCCCCTGGAGGCTATCCTGGTGCCCCACAGCCAGGCGGAGCTCCATCCTATCCTGGAGGCCAAGGGTTTGGAGCCCCACCAGGTGGAGCAGGCTTTCCTGGCTATCCACAGCCACCTACACAGTCTTATGGGGGTGGCCCAGCACAGGTCCCACTGCCTGGTGGTTTTCCTGGGGGAGCGATGCCTTCTCAGTATCCTGGAGGACAATCTCCTTACCCTAGTCAGCCTGCTCCGATGACTCAGGGAACTCATGGAACAATCCGACCCGCTGCCAATTTTGATGCCATGAGAGATGCTGAAGTTCTTCGTAAAGCAATGAAGGGTTTTGGTACAGACGAGCAGGCAATTATAGATGTTGTGGCCAATCGTTCCAATGACCAAAGGCAAAAAATTAAAGCAGCTTTTAAGACCATGTATGGCAAGGATTTAATCAAAGATCTTAAATCAGAGTTAAGTGGAAATATGGAAGAACTGATCCTTGCCCTGTTCATGCCATCTACGTATTATGATGCCTGGAGTTTACGGAATGCGATGAAGGGAGCAGGAACTCAGGAACGTGTGTTGATTGAAATTTTGTGCACAAGAACAAACCAGGAAATCCGAGAAATAGTCAGATGTTATCAATCAGAATTTGGACGAGACCTTGAAAAGGACATTAGGTCAGATACTTCAGGGCACTTTGAACGTTTACTTGTATCCATGTGCCAGGGAAATCGTGATGAGAACCAGAATGTTAACCACCAACTGGCTCAGGAAGATGCTCAGCGTCTCTACCAGGCTGGTGAGGGGAGACTAGGGACAGATGAATCTTGCTTTAACATGATTCTTGCCACAAGAAGCTTTCCTCAACTGAAAGCTACCATGGAGGCCTATTCCAGGATGGCTAATCGAGATTTGTTAAACAGTGTCAGCCGTGAGTTTTCCGGAAATGTTGAAAGCGGTTTAAAGACCATCTTGCAGTGTGCCCTGAACCGCCCTGCCTTCTTTGCTGAGAGGCTCTACTATTCTATGAAAGGCGCCGGCACAGATGACTCCACCCTGGTCAGGATTGTGGTCACTCGAAGTGAGATTGATCTTGTCCAGATAAAACAGATGTTCAGTCAGATGTATCAGAAGACGCTGGGCACAATGATTGCAAGTGACACGAGTGGAGATTACCGAAAGCTTCTTCTGGCCATTGTGGGCCAGTAGGAGAGATTTTTATAAATGAATGAAGCTATTCAAAGCTTATCTTCAAAGCAATGACTGACCTGCATGCAGCAACATCAACCCTCACCTAACCAAAAGAGCTTTTACTAAGGACCGTGTCAGGGTATTGTGCTTGGTTTGCACATGTGGTTATTGCCTTAATTCCAATGTTCTTTTTTTCTCTATGTACAATCAAGTAAAGCCATATCACAATGATGAAGTAATAATGCAATGTTTGTAAAGCATAATTCTCACTGCTCTTATTCTAAATAGGACACCGAATTGAGTAAAAGTCACAACAGTTTCAAATTCTGTGTGATAATATTGAATAAATTTTAATAAATAATATTGAACATTAGATAAACCCTTTGCTTTCCATTGGACAGTTATAGTTGGTAGTATGTCAAAATTGTATTACTTTTTAAAACAAATTCCGCTGTTTTGACCTAAAAGAGTAATTTGCATCTTACTTCACATAAATCAGTATTCTATATTCATAAACGTTGAACTTCCCACATAGAAAATAGTTTAGTATTGGCTGTAGCAGCTTTTTAAAAAGAGATTATATGTTTATATGCCTAAAATATATAGCCTACTTTTATGTCTACTAAGACTGCCTATAGATCTTTATTGGCCCTTGATTTAAAAAAAAATTATAAAATACTTTTAGTTGCAGTTTAATCATGATTCAAGAAAATGAAGCTTGACACATAAAAGGTGCCAAATTAATAAATAAATGAAACTTAAATCATCTTCCTGGGAGATTGAATATTAGTTCTTTGGAGAAGTCGTTCAGGAACTCAGTGCTATAGCAGTGTGATTTCAAACCTGGGTTTATTCCCAGTACTGAGCAATTGCTTATTATGTTGAGCATTACAATAGGTAGTTAGGGAAAGTACAAAGGAAGGAGGTTTGTAATCTAGTGGGTGATCTAAACAAAACTTAGGATACAAGGATATTGTTACATTATAAATTCTTCTGAGAATAATAACCCTATTTGTTCTTTTTGTTGAACTCCCTGGCACAAAGCAGGTATTTAATATATATATGGTGAATGATTGTAGTAAAAATTGAGGGAAAGAAGAGTAAATATCAGTTATAATTCAATGAACAGTTGTTTGGGGGTAAGTGCCAAGGGACATACATGCAAGGTGGTATAAGACACAACCTGACTCTTAGAGAGAGAGGCCTATGTACAAGTGTAGTGTGAGGCGAAAGCAAGATACACTGGTAGAAGGGTAACAGGCCAAGGTAGATTTCTGACATAGATTTTGGAAAAATAACTAACAGCAATAGGATTTGGTAAAGGAAAAGGGGTATAAGTTATTAAAGGAAGAAAATTTGTGAGGAATATATTTTTAAACTTTTAAAGATTGATATATATCATACCATTCATCCTTTTAAACTGTACAATTTAGTGGGTTTTTAGGATATTCACACACTTGTGCAACAGTCACCACAATCAATTTTTGAATATTTTCATCACCCAAAAAGAGAACTTAACACCCATCAGCAGTCAAGCCGTCTTTCCTTTCTTCCTGCCTGTCCCCTGGCAGTCACTAATCTACTTTCTGTCTCTATGGATTTCCCTCTTGGGGGCTTTACGTATGAATGGAATTACACAGTGTGTGGCCCTTTGTGTCTGGCTTCTTTTAATCAACGTACTGTTTTTAAGGTTCACCTGTGTTGTAGCATGAATCAATACTTCATTCTGTTTATGGCTGAATAATCCATTGTTTGGATCTACATTTTGCTTGTCCATTTATCAATTGATGGACATTTGGGTTGTTTTCACCTGTTTACCATTATGAATAAGGCTGCTATGAATATTCACGCACAAACTTTTCTATGGACACAAGTTTTCAATGCTCTTGGCTATAATAATAGGAGTGGAATTGCTGGCAGTAGTATCTTTATGTTTAACTTTTTGAGGATCTGCCAAACTATTTTCCAAAGCAGCTGTACCACTTTACAGTCCTACCATCAGTGAATGAGGCTCCCAGTGTCTTCATTCTTCCCGACACTATCATTGTCTCTTTGATTCTAACCATCCTAGTGGATGTAAAGTGGCATCTCATTGCAGTTTTGATTTGCATTTCCCTAATAACTAATGAATATATTTTCTTGATTGGCCATATTTTCTTGATTGTCCATTTGCATATCTTCTTTGGGAAAATATTAAAATGCCTGTTTTTAAACTGGGTTACTGAGAATTCCCTGGCAATCCAGTGGTTAGGACTCCATGCTGCTGCTGCTAGAGGCCCAGGTTTGATCCCCTGTTTGGGGAACTAAGATCCCACAAGCCACATGGTCCCAAAAAAGATTACGATGTGTGTAAGGCAGGATAGTTATCTCAACACAAATACAGTCGCAATCTTCACTTGGGAAAAAATCCAGGGAGAAACGTCTTACTCAACAGTTACATGTTTTTATATTTGAGAACTTTTATGACTTATAACACTAACTTTAAAAGCATTTTTCTCAATTTTTATAATTTTAACATGTTTATTAGCAGAAATGCAATTTATTTTTAAAATTAGACTCTGGTGACTATCCATGGAAAGTAATGTGTGAGTGTGTGTATAGTTTAATAATTTGTTTTGAAATAATTTCAAATGTATAGAAAAGTTGCCAGGACAGTACAAAGAACTCCCATGTCCTCTTTACCTAGATTCTCATACAGTTAACATTTTATTGGTTCATTACTTACTCTGAGTGTGTGTGTGCGTGCATATGTCTTTTGTTATTGGTCTTTATTTGAACTGTTGGTGGGTTGAGAGAGCAAACTGCAGTCATGCTGTCTCATCACTCCTAAACACTCCAGTGGGTGTTTTCCCCTGAACAGGGTCACTCTTCTACATAATGGCAAACAATCTTCCACATCAGTAAATCAATATTGGTACAATACTACCACCCAATCTAGTAAGCCTATTCAAATTTTGCCCACTATCCCAACAATGTCTCTTCATTTCTGGGTCAACATCCTATACAGAAATACGTACTGCATTTAGTTGTGTATTTTCAGACTCCTTTAATCTGGAAGAGTTGCCAGTCTTTTGTAGCTTTACAGTTTTATTAAAAGGTACAAGCTTTTATTATAGGATGGCTTACAACCTGGGTCCTTTGTCTGTAGGAATACCACAAAATGATGCTTTGCTTTTCTCAGTGAGTCTCATCAGGAGGCATAAAATGTAGACTCGTCCCCACACTGGTGATGTTAACCTTGATCACTTGATCATGCTGGCTTCTTAAATTCACTGTTTTTCCCTTTGTAATTGATTAGTATTCCAAAATCATGCCAGTAAACTACTCCTTATCAAATCTCCACATACCAGCCTTAGCACTGAAGACTCCTGTCTAAATCATCCACTCCTATAGTTGGTGCCAAGTGGTAATTCTCTATTTCAATCATTTCCTCTCCATTATTGGATTGGCATTCAACTGCTATAAAGAGCTTTCCTTTCTCTTCATTATATCAATGTGAACTTGTGTATTCCTATCTTATTCAACAGATTGTAATCCATTATTATTGTTTACTTTGATGTTCAAATTGTCTGATCTGGCCAGTAGCCCCCCTCAAGTGGCTCCTAACAGTGTAACATTTTAAAGTATGTATACTGCTAAGATTCATACACACGGTGAATAGCTATAGTTCATTCATTTCGACTGCTTTGTAATATGCGATTTTTTAAATATATTATCAGTGTATTCATCCTCTCTTCCTTTGGGTTGTTTCCAGGTTTTTGCTATTGTATTTTGCCTTTCCAACTCTGAGGTAATGCTGAATTTCAAATGTATTAAATTTTTCCATTAACATCATATACTTGGGAGTCTGTTTATTGTGTAAATATTGCGCACTAGAAGCAGAGTGGTTTTGCATTCTTCCCAACAATGTGTGAGGCACTTATTTTGCAAATATTGTCTTAGCTGCATTTTTCACGGAGAAAGACTTAAATCATCTGTTTTCAAAATCGTTTAATAAAGATTTTTATCTTTAAATAAA EMBV3_06756 AGCAAGTTCCCAACTTTATTTCTACTTTTCCCGAGACATCAGGGGGAACCTGGCCCCACT Gene BVV0101_027448 + 0 NULL GK000011.2:2222400-2230722 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026598 TCONS_00023729 TCONS_00023730 TCONS_00026599 2 XLOC_015074 XLOC_014347 Coding TCONS_00026598 XLOC_015074 Coding Coding ASTL 11:2230286-2244016 j TSS19052 2099 1 TCONS_00026598_3 232 0.0328727965697951 8 0.847694660936703 0.0201675285195312 0.00803530770390257 0.0133541673085728 0.00551295367831892 0.00999200147243312 0.00254806604394462 0.0034386924291208 0.00498601781596747 0.00303181641602532 0.000205015774247912 0.000195774458766291 1.71578466267774e-05 0.00021107570195609 0.00341156279034797 0.00011690975346246 0.000129072766550558 7.28244012732213e-07 4.23214070266573e-07 0.0072659921806988 0.0169597464165591 0.00159000477565431 3.10487359008614e-09 4.36710655617935e-05 6.43067893311021e-09 0.00523678119815603 0.0095022697712361 0.00931188921498658 5.49115029937868e-05 2.56329093387461e-08 0.000380953932503419 XM_002691130.3 ASTL PREDICTED: Bos taurus astacin-like metallo-endopeptidase (M12 family) (ASTL), mRNA. 0.0 3600 100.00 0.950452596474512 NM_001002036.3 ASTL Homo sapiens astacin-like metallo-endopeptidase (M12 family) (ASTL), mRNA. 0.0 910 81.40 0.453072891853263 TCONS_00026598_3 sp|Q6HA08|ASTL_HUMAN ASTL_HUMAN Astacin-like metalloendopeptidase; 5e-102 307 72.17 0.90948275862069 1 coding 1 0 0 0 -1.52289235181715 0.00853473317745784 -0.0901720487903567 0.119680699927142 GAATACAGAAGAGCCTGGCAGGCTACAGTCCCTGGAATCGCAGAGTCGGATGTGACTGAGCAATTGACTACACACACTTGGCTTTTATCAGGCCGAGTCTGATGGCTGATTCCAGAGGAGTCCCCAGAGAGCAGCTTCCTCCTTGAGGGGGACATCCTCCGGCCGAGTCCCTTCCGGCTGTTCTCGGCGACCAGCAGCAAGTGGCCTAAGAATGGCGGTGTTGTGGAGGTCCCCTTCCTGCTCTCCAGCAAATACGATAAGCCTAGCCGCCAAGTCATCCTGGAGGCATTTGCCGAGTTTGAACGCTTCACGTGCATCAGGTTTGTTGCCTACGATGGCCAGAGGGACTTCATTTCCATCATCCCCATGTCTGGGTGCTTCTCGAGCATTGGCCGCAGCGGAGGGATGCAGGTGGTATCTCTAGGGCCCAGCTGTCTCCAGAGGGGCCCGGGCATCGTCCTGCATGAGCTTATGCACGTGCTGGGCTTCTGGCATGAGCACTCGCGGGCCGACCGGGACCACTACATCCGTGTGAACTGGAATGAGATCCTCCCAGGTTTTGAAATGAACTTCATCAAATCTCGGAGCAGCAACATGCTGGTGCCCTATGACTACTCTTCAGTGATGCACTATGGGAGGCTCGCCTTCAGCCGGCGCGGGCTGCCCACCATCACTCCACTCTGGGCCCCCAGTGTCCACATTGGCCAGCGATGGAACCTCAGCAACTCGGACATTGCACGGGTCCTCAGGTTTTATGACTGCAGCCCAAGTGGCCACGAGCCCAGTGGGAAAGGGCTCCAGACCCCCGGGAGTGGTAGGAGCCCCACTCCTGGCTCTAGGTCACAGCTGCAGCAGCTTCTGAAGGCACTGTTGGAGGAATCCAGGACATCTGACCCCAGAGGCTTCGGGGCAGAAGACCAACATGCTGCTGCCAGGTCTGAAGAGAGCCTTCGTGCATGGAAGCCCTCCGCCCTGAGGAATTCCGAAGTGAAGGCCTCTGCCGACCCTGCCCCGTCAGCCCCCAGCTTCCTCCCTGAGGCCAAGGCCTGGGGCAGTCTTTCCTGACATTGCCCTGGCGCCACCCCGGCAGCACCAAGTGCCCCATTTCTAGAAGAAGACCAATCCACATCCGTCTAGGCTCTTCTGGGGAACCCTGCTCTGCCAGGGGCCCATGCACCCAGAAATTGCTTTATGAAGACACCCAGAGGTCAAGCCTGTGGCTTCCGTCCCCTTGGCCCCTCTGGGCAACACCTCTGCCTTCCAGCTTCTCTGGTTCCCCCGTCTGAGGCTTGGGCCCCTCTCTCTGCTCCTTCCTTCCTTGTCATGTTTCCCCAAGGGCTCCTAGGACAGAGAGACCCTCTAGGTCAGTCGGGGGAGTGCTGACTCTGCCGGCTCTCATCTCCTGCCTCAGCCCCTGGGGAGGATGGGAGGTGACTTCTCGACGGCTCCAGGGACAAGGGACCTGGAGGGCTGGGCCTCCCTGAAGGCCCCGGGAGCCCCTCTGAGGTTGAGGCGCAGCCCCCCGCAGGGACTAACGAACCCTCAGGCCGCCCCGTGCTCGGGACCCTGGGAGCAGCCCCTCTCCCGGTTGTCTGAGCGCTGGGAACCTGGGAATGCAGCCCTGCGCTCCAGGAGGCTTCCAGAGCCCCACTTCCTCCCTTGCCTCCCGGGGAGGTGAAGAGGTGGGGGCCCTAGGTGCAGGGAAATTTGCTGCGGGAAACTCAGCAAGAACATGAGGACCTGAAGTCAGGACTCAAGAGCTGTCACCCGCGCTGCGCTTTCCAGGAACTTTGCCTCTGCTCAGAGCCCGCGCCCCGAGACTTGGCCCGAGGAGGCCCTGGAAGGTGGGGAGGGGCTGCGGGGCCACCCTGACTATCTTTCTTCAGCCAATCCCCACTCCTCTCCTTCAGCTGCCGGCCTCCCTGGTGAGGGCTGTTCAGGGTCCAGAAAGTCTCTAGGGACTGCAGTGAGCGACCCCGTGCAGGTCTAGGGGCCTGCTTTGGGTGGGAGGGCAGCAGGAGCCCCTGCCTGTCCCAGTGGGGCCAGGTTCCCCCTGATGTCTCGGGAAAAGTAGAAATAAAGTTGGGAACTTGCTCCAG EMBV3_12738 TAACCCTCGGGTGCGGCTGTAGCGGGAGGCGTTTACCATTCTGAGGAGCATCCATTTGAA Gene BVT0101_030705 + 0 NULL GK000030.2:77826624-78003732 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247284 1 XLOC_151289 NonCoding TCONS_00247284 XLOC_151289 NonCoding NonCoding - X:77846433-77848232 - TSS185231 388 3 0.78587319243604 0.00275269058463433 0.00262864882256941 0.00636807994463069 0.0008346952754625 0.00516622594676749 0.000248919030277834 0.00112726278146283 0.000609764240575267 0.00697368066068519 0 0 6.45071905131551e-05 0.000229246786615778 3.63710472531978e-05 0.0004552141445345 0 0 0 0.00057293433456551 0.000852591193815461 0.00063765937370978 0 0 0 0.00138390946672195 0.00217900384877379 0.00482474112936545 0 0 0 XR_233004.1 LOC101904093 PREDICTED: Bos taurus uncharacterized LOC101904093 (LOC101904093), 2e-175 618 100.00 0.878865979381443 0 noncoding 0 0 0 0 -0.0713902869682499 0.551343654464524 -0.0594980943694872 0.442432736209066 AGAGTTACGTCACCCGCAGCCGGCGGTTCCTTGGGATGCGCTGGGCGCTGAGGGCCGCGGTGACCCTTGTGCTGGGCGCAGCGCAACGGGGACCTGTCCTTCCCCTACCCAACCGCCCTGTTGGTAGCTGAGGGAATCCTGCCCTCGCGGCGTCTGGCCGGAGAGGGTAGGGGAAGAGGCAAGTAGGAAGGCGGCTTGCTGTAACCCTCGGGTGCGGCTGTAGCGGGAGGCGTTTACCATTCTGAGGAGCATCCATTTGAAAGCCCTCTGAGATGAAAACTCTTGGTGAATATTTTGCATAAACAGCCACGTGGAGATGCAAGAGTGCAAAACAGAGTAACTGAAAGCTATTGGAGGTTAGTTCACCACTGGAGACTACCAAAAGTNN TCONS_00244744 r 3' 19811 TCONS_00244744 r 3' 19863 EMBV3_09303 ATCAACACCCATATCCGGGAGAGCCCCCAGGCCATGCATCAGACCACACTCAAGGACCTA Gene GeneID:618158|LOC618158:XM_002691166:228_cdna Constitutive 0 NULL GeneID:618158 11 GENE LOC618158 NULL hypothetical LOC618158 EMBV3_12529 GTGGAGTGGTTTGATTGGGTGGGGGCTGGGTGCCATGTATGTCAATGCCTGTAATTTTCA Gene BVV0101_052456 - 1 EMBV3_00924 GK000013.2:44952167-45166173 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06253 CCCTGCGGCCCCGGCCCTCCCGCCGCGATTCAGGCGTAATGGTTATGAAAGCTTCTGTAG Variant GeneID:506175|NAA35:XM_002689817:13_cdna 119^429 1 EMBV3_16978 GeneID:506175 8 GENE NAA35 MAK10 N(alpha)-acetyltransferase 35, NatC auxiliary subunit EMBV3_23218 TGCTGTTTTCTTTAATCATAATTGCTTTAAACTAAGCCATTTGGATTGAGTGACAGTGGC Gene GeneID:514510|DNAJC16:NM_001101091:115_cdna Constitutive 2 NULL GeneID:514510 16 GENE DNAJC16 NULL DnaJ (Hsp40) homolog, subfamily C, member 16 EMBV3_13102 GCCAAGACATCAAGAAATGGCCCCTAAAGTCCCTATAAGACAAAGATAGAGGGGCATAAG Gene BVT0102_159933 - 1 EMBV3_07028 GK000002.2:89513282-89517708 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102848 TCONS_00102847 TCONS_00102845 TCONS_00102846 TCONS_00102849 1 XLOC_061963 Coding TCONS_00102847 XLOC_061963 Coding Coding SGOL2 2:89485765-89514823 = TSS76499 5874 1 TCONS_00102847_4 1310 0.0820565202587674 8 0.798120934714527 0.00295480558952272 0.00343020465170853 0.00166651441571513 0.00148506627032496 0.00155086101700785 0.000589920958167942 0.00179740099134829 0.00152791069604781 0.00387875848513395 0.00114307182668648 0.000737604434923836 0.000668442995188033 0.000404599283778373 0.00161574897507514 0.00192120312944663 0.0130550988758704 0.000213236730119174 0.00159341389599538 0.000684601914652784 0.00130764086333978 0.000597727365017083 0.00592601086038008 0.0017492955535625 0.00231661154681508 0.00153568783516866 0.000846398522561587 0.00116403164031506 0.00124300597832412 0.00121692004082798 0.00263987361732839 NM_001191290.2 SGOL2 Bos taurus shugoshin-like 2 (S. pombe) (SGOL2), mRNA. 0.0 9764 100.00 0.921518556350017 XM_005246344.1 SGOL2 PREDICTED: Homo sapiens shugoshin-like 2 (S. pombe) (SGOL2), 0.0 1929 78.13 0.38661899897855 TCONS_00102847_4 sp|Q562F6|SGOL2_HUMAN SGOL2_HUMAN Shugoshin-like 2; 0.0 1046 64.88 0.670992366412214 0 coding 0 0 0 0 0.0448359758983565 0.868801166194648 -0.0104964420567128 0.833115426654682 AAACCCAAGCTCTGGCCGCGAACGCCGGGCTCCCGGAGCTGGGTGCTGGTTCCCCCGACCCTGAAAAAGCGTGATGGAGTACCCAGCAATGGAAACCAGTTCACTTTTTACCTCAGGAATTAAGAAACATGTGAAAGACAGAAGAATTTCAAAGACTACTAAGTTAAATGTTTCTCTTGCTTCAAAAATAAAAACAAAAATAATAAACAATTCTTCTATTTTCAAAATTTCTTTAAAGCATAACAACAGGGCATTAGCTTTGGCTCTTAGTAGAGAGAGAGAGAATTCTCGCAGAATTACAACTGAAAAGATGCTGTTGCAAAAAGAAGTGGATAAACTGAATTTTGAGAACACGTTTCTTCGTCTAAAGCTAAATAATTTGAATAAGAAGCTTATAGAAATAGAAGCACTCATGAACAATAACTTGATAACTGCAATTGAAATGAGTGCTCTTTCTGAGAGGGTTCCATTAACTTCAAATGATGATGATGATGAAGATAAAGAGAAAATACAGTGTGATGACATCACCATATCAAAGACATCACCTGATAGTCCCTCTTTGGTATCAGCAAGACCAGTATCAACTCAGAATAATTTGAGATTGCTATTTGTTAAAGAAAATGATCAGAATGTTTGTAGTGTAAATGATTCAGAACATGTTTCTTCTATTGTTGATACACTTCCCAAAGGAAACCATTCCCACTCAGACCAAAGTTCTAGGAGCTCTCTAACAAGTGAGAAGAAAAATGCCCAGGCGATCAGCCACAAAAAAGAGAAGTCATCTCCTAGTAATGTGACTAAAAGGAAAAAACGTGTTTCATCTTGGGAGTCAGATAACCCTGCAGACACTCCCTGTGTAACAGATTTAGATCAACAACAGGTTTCAAGTCCAATATTAAATTGGAATAATGAAATAAAAGATTACACTAATGAAACAAATACAATGCAGAGAAACATATTGTGCCTTCCTGCCTCATCTGAGTCTGCAAGTGAACCTCCTACAAAAGGCATGAATCCACTTCAGGGTAATGACTTTCAGTTGCAGAAAACTGTGTATGATGATGACATGGATTTAACTGCTAGTGAAGTCAGCAAAATTATTACAGTTTCAACAGGCACTAAGAAGAAAAGAAAGAAAAATTCAGATGATTGTGGAATGAAAACTTTCAGAAAAGTGAAAGATCCAAGCTCTGAAAAAAAGAGAGAAAGATCAAAGAGACAATTTAAAAATTGTTCAGGTGCGAATATTGAGGAAAAAATTGAAAGTGGACCAGAAGATAGATCTGTTGACCTAGATGGTGAAGGGGATTCAAGAGATCCAAATTTTATCTTCAGTACTGAACAGTTGACTCAGTTGAACACGTGGAAGAAAATAACCCTTCCTAATGGCTTTGATCAGGGTGACAAACAAAGTATGCAGTGTAACCAAAAGAAGAAAAGAATTCATGTAACAGATGAGCAAGAGGAAACATATTCTTTCTCCCAAAGTTCAGATAAATTCCCACAGGATAGTAAATTTGATTTGTGTCCGAGTTCTCTAACTTGTAAGAAGAGTAAAGCTTCTAGACAGACATTTGTGATTCATACGTTAGAAAAAGATAACTTATTCCCAAACCAAAAGGTTCAAGAAACCACCTCTGAAAACCTAGGTGTCACAAATGAATTTCAAACAGCTTATCTTTCCAACAAAGGTAATCCAAAGTTATGTGATGATGAGACCCAAAATATGTTTGATTTGAAAAAGCATGTCACTGATACACAACCCACTCAGCAAAATGAATCAAAAATAAATAAAGATTGGCAGAAAATAAATCGGAAAACAGAAATAATTTCTAAAATGAACCAAATACTTGGGGATAATACTAAAGATGTGCAAGGCCCAGAAAAAGGTAACTTTTCCTTCCAAACCCAAGAGGATAAAGAAACCATCTCTAGAAACCTAGATGTTTCAAATGAGTTTCAGAAATCTGTTCTTTCCACTGTCAATAATGGAAACCTGTGTGATTGTGAAACCCAGAATGTGTTGGGTTTGCAAAAGCAGATCACCTACGCATACCCTGTGCAGCAAAATGAATCAAGAATTAATAAGACTCTTAAGCAGAAAGTAAATCGGAAGACAGAAATCATTTCCACAGTGAATCATTTAGATAACACAAGTGAGTATTGCCCAGAAAAGGGTAAAGAAATCATCCCTGAAAATCCACTGGATACACATGAGTTTCAGACACCCACTCTTTCTTCCAAAGACAGTAGAGACCTATATGATTATGACACTCAGAATGTTTTGGGGCTGAAAATGAATGTTCATGATATACAGCCTGCTTGTCAGAATGAATCAAAAATAGATAAGCTTAGGCAAAAGGTATGTCGGAAGACAAAAATCATTTCTGAAGTCAACCAAATATATATGAGTGATGACAAAGGCAGGCATGACCCAGAAAAAGGTAACTTACTTTCTCTAATCCAAAAAGATAAGGAAATCATCCCTGAAAACCTGGAAGACACAAATGAGTTTCAGATAGTTGACCCTTCCCCCGGAGTTAATAGGAACCTATGTGATTATGAGACTCAAAACCTTTTAGGGGTGAAAAAGTGTGTTACTGATACTGGGAAGCAAAAGGAATCAAAAATAAATAAGAGACCCAGGCAGAAAGTAAGTCGGAAGACAGAAATAATTTTGGAAATAAACAGAAAAAATGAGTTTAACAATAAAGGTATATGTGACCCAGAAAAAGGTGACTTCTCCCTAACCCCAAATAATGAAGAAACCATTGCTGAAAACCTAAAAGTCACACATGAATTTCAGACAATTTATCTTTCCACCAAAGATGATGGACATTTATATGATTATAAGACCCAGAATATGTTGGATTTGACAAAGCATGTCACTGATAAGCAACCTACTCGGCAGAATGAATCAAAAATAAATAAGAACCTTAAGCAGAAGCAGAAAGTAAATCGGAAGACAGAAATAATTTCTGAAATGTGCCAGATATATGAGGTTAATGATAAAGATGTGCATGGCCAAGAAAGCTACACAAAAAATCTTGATTTTAAAATAAATAAACAAAGACCTGAAGGCCAAGCTGTTAGTGGATACTGTATGGAAATCAACAGTGATGAGAAAGAAAATTGTGATGAAATTTCAAATCCTTATAAACCAATTAAAAAGCATGGGAAAGAATCAGACAAGGCAAAGAACATTTTGGCAAAAAGTGACAACATGCCTGTTTTGCAGTTGACAGGTTCTTCACAGATGTCTGTCTTAAATCTAGGTTTAAAACATATTACTGATGAGGCAGATTCTGACACTGGAAACCACATGGAACCACATAGGAGTCCGAAGCTAAGCACTAAAACTCTGAATAGAAAGAGAAAGAGCCACTTTGTGGAGGTGACGAAGGAAGGAGAGTGCCAGGTCAAAAAAGTAAATAAGATGACATCCAAATCAAAGAAAAGGAAGACGTTCGAAGACCCTTCTCTGGATAGTCACGAACTAGTGGAGATGATGTCCGACACCATTCAGGAAGTGCCAGTTGAACCTGAGTACACTGTTAAGGGAAAAAAGTTGGAAAATGTGGAAACTGTCAAAATTAAACCAGACTTTTACACAAAAATGTTGATACCTTTATCTCAAATGTATTCACCTAGCAGACAAGATTCCTCCCGTAACAGTGTTCTTGAGGGTTCAGTACCTTTGAGTATTTCTTCTAATAAAAATCTGAAAGAAAATTTTGCCCCAGAGAGCTCACCCATCTTTCAACTAAGTGATGAGGTACATGAGAAGATGAAAGACATGAAATTTAAAGTCGACCAAAGACCACAAAGATCAGAAATAGGTGTTAGAATGCTACAAGACTTGACAAATACCAGTTTTGTTTCAAATACCGCTGCTAAATTTGAAAACAAGGTAGAAGACCTATCTTCAGAGCTGCCAAGCCGAAGAAGAAGGTGTACTCCTCTCTCTTTAAAGGAGCCAAGTCTCAAAGGGAAGATGAGAAGATGAGGTGAATTTATACATTCTGGTTTTCCTGAATTCTCAAACCATAGCAGTTCAAAACAGGGATCTAACTAGGATCAAGAAGATGAAAAGCATGATGAAAAGTTCTGGGTTTTTTTTTTTTTTTTTTTTTCATCTCCTGCTTTTCTGTGGAGTGTTTATTTTTATGTATAGATAATATGCATTAAATAGCTATTTTGTAATATTAAGGACTTTAAGTTATTTTGGTCATCTTATAACTTATCTTCCTGCTCATTTAATCTCCTTTCAACCAAACAACCTTTAACTAAACAATAGCTATTAACCTTTTAACCGAATAAAATGTATTATAAATACTTTTGCACTGATTATCTTGTTATACACCAAACTACCTTGTTTTGTTTTATTTTGTTTTTAAAACCATTCAGTAAATGTGAACACCTATAAAATTTTAAAAGTCACTTTCTGCCCTGGCCAGTTTTCTCTCACTCTTCATTCTTCAGCTTTCAAAATTACTTGTTTACTGTCACCTGCTGCATTACTTCCATTATATGTAATCTGATGACTTGAGTAGGTTTATCTCTCAGGTGCTTTTGAATTTGGTTTTTGTAACTTTAAAGATCACTTATTATTCCAGTATTAAAACGTAGTAAATCCTATTCGTATCTGAGATTAACAAACATAGCTTACTGTATTGAAGTGATTAATAAAAATGTATTCTGCCTAGATGGAAAAGCTTTCTTATATCCAGCAACTAAATATCCAGCAACTAAAAGAATGAGCCCAAGAAATCTACATTTTGTTTAACAAACACCTCAGATAATGCTGGGGCAGACTGTCCTAGGACCAAACTTTGAGAAACAGTTGTAAGACCACAGAGTCCCATAGAACTTACTCATTTATCAACAGTGTGTGTTGAATGGAGGCTACATGCTTTATTAAAGGAACAATTTACACTAGTTTAGAGCGTGGCACCCTGATAGTTTTTCCTTTCCTGTATTATTATTACTTGAAGGCTTTGAATCTCTGTCATTATCTGGTATTTGGTTTCCTAGTGTTTCTATTTTTTCCTCCTTTCCATGAGGTTTGTCTTTTTGTTGTTGTTCCCATGCAAATTAGTTTTCATTGTATCAGACTTATAATCTTTTATTGTTGGAACTCAGTCACATTAAGAAAGTTTTCCTGTTCCCAGATTAAGAGAGACATTTACCCATGGTTTCATTTTGTTTTGACATTTAAATTTCTGATTCATGTGGATTTTGTTTTATGGTGAGATATGAACACAATTTTTGACCTTTTCCCAAAGGATTGCCCGTTAATTAAAAAGTCCATGTTTTCCACTACTGATTTGAAGTCCCACATTTTTCAATGTTGTATTTCCATATACACTTAAACTTATTTCTCAATTTTCTGTTCCCTCTACTAGTTTCTGTCTTTTTATGCCCCTCTATCTTTGTCTTATAGGGACTTTAGGGGCCATTTCTTGATATCTTGGCATTCTTTTTTCCTGGTAATACATATAAATGGAGTCTTTGAGTCTCTTTTCTAATTGATTATCACTTGTATATATGAAGATTACTGATTTCTGTATGTTAATTACTAAACTGTTATTGTTTATACTATTTTCCAGATATATATTTATATATATATTTGAAAACCGGGCTATTTTTCCTGCTTTCTCTCCAATTCTTAGGCCTCTCACTGCTTTCTCTTATGTAACTGCATGGCTGCTACCTTATATTTAGTGTTAAATAGCAGTGAGAATGGTGGATATCATTGTCTTGTTCCTGATTTTCATAGGAATGCCTCTGGCTTTACTGCATAAGTAAGATGCTGTGAAATGAGCTGTTTGTGTATGCTTATAATCACATTAAAGTATTACCTATCAATTATTA EMBV3_04296 CAACCTCTGCCATAGCTTCCAGTCTTTCAACACTTCCTACACAGATACAGGATTGTGGGG Gene GeneID:534546|PMPCB:NM_001034613:6_cdna Constitutive 0 NULL GeneID:534546 4 GENE PMPCB MGC128129 peptidase (mitochondrial processing) beta EMBV3_11662 TCCAAGTCGGCTCCGCCTCTTGGCCCAGAACCTACTTGACAAACCAGTATGGATATTGTT Gene BVT0102_239523 + 0 NULL GK000025.2:32463916-33119169 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229354 TCONS_00040888 TCONS_00188848 TCONS_00196835 TCONS_00049674 TCONS_00091551 TCONS_00135546 TCONS_00166151 8 XLOC_138849 XLOC_024702 XLOC_114889 XLOC_118500 XLOC_029805 XLOC_056325 XLOC_081769 XLOC_100989 Coding TCONS_00229354 XLOC_138849 NonCoding NonCoding - 8:2557529-2558613 - TSS170858 1084 1 TCONS_00229354_2 118 0.997232472324723 1 0 2.51027591171023e-06 0 2.13423121305016e-06 0 0 0 1.84450574633871e-06 0 0 6.46362951175192e-05 3.99413746252622e-05 1.55532181485613e-05 1.35645042964244e-05 0.00014489275163546 5.78133364332646e-06 0.002164817523245 0.00318171808389475 0.00462562329167112 0 3.31707035394452e-06 0 0.00320644011591593 0.00184796150768437 0.00222080368255703 0 6.49950411920376e-07 0 0.000293836862500732 0.00101979446118106 0.000306281287184322 XR_229156.1 LOC101907943 PREDICTED: Bos taurus uncharacterized LOC101907943 (LOC101907943), 2e-79 300 80.47 0.310885608856089 0 noncoding 0 0 0 0 0.044186773713356 0.68151882467206 -0.00421894400467007 0.937197478317913 GGGGTGTTTCACCTTGGGTTTATCCTGTCTGGGACTCTCTGGGTTTCTTGGACTTGGGTGGCTATTTCCTTCCCCATTTTAGGAAAGTTTTCAACTATTATCTCCTAAAGTATTTTCTCATGCCCTTTGTTTTTGTCTTCTTATTCTGGGACTCCTATGATTCAAACATTGGGGCCTTTAACATTGTCCCAGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCCTTTTTCTTCTTTCCTCTCTGCTTCACTTACTTTCATCATTCTATCTTTCACATCACTTATCCTATCTTCTGCCTCAGTTATTCTACTATTGGTTCTGAAAGGTTGTTGTTGAATCACGCGAAGACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGCGGCAGAAAGAGTACCCGCCTGCTAGTCTTCAGCTGGATGTTATATAGTCACTAGTAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGAATGGCACCAGGCCCCTCACTCATAAGATGCATTTTGGGATAGTCTTGGCGCCAAATGGTTTATCCTGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGACAGATCACCATACAAATAGTTTCATTTACATAGATTAGGAGAACAATATCCATACTGGTTTGTCAAGTAGGTTCTGGGCCAAGAGGCGGAACCAACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAAAAAGGCATTGGTTATCTCTAGGCTCAAGAATAGCTAACTTCAGGCGAAACCAGGTGTCATTATGGCCACACAGTATTTTAAGAGAAACCTCCCTTTAAATTTGTATAGAGAAGGAAAAAATATTGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGGCTATTTCCTCCATTTGGAGACCCCTGGCCTTCCTGCCTGTTACCCTCTCA TCONS_00226773 . 5' 692321 TCONS_00226773 . 5' 692321 EMBV3_35155 TTAAAGGGGAAAAGCAAAGGAAGGGGTACCAGAATGAGTTAACTCAATGTTGAAAGAAAG Gene BVV0101_060704 + 0 NULL GK000023.2:45258403-45265655 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11293 AGAAGCTGTGTCTGGGAAGCTCCAAGCAAGGTTACGTTCCGGGGAACCCCGTCTACAGAG Variant GeneID:618833|IQCE:XM_002698166:644_cdna 494^628 4 EMBV3_38513 GeneID:618833 25 GENE IQCE NULL IQ motif containing E EMBV3_06168 CCATCCGTGGGGCCATCATCCTGGCTAAGTTGCCCCCAGAGGCACTGGCATCGTCTCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29321 GCTGTGTGCACTGCTGGTTCTGGTGTCCTGGATGATAGGTGCCCTGAATTCCTTGTTACA Gene GeneID:788246|LOC788246:XM_002688702:67_cdna Constitutive 0 NULL GeneID:788246 7 GENE LOC788246 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_25204 CCTGGATGAGCGCTACCATTCTGACTTCGACCACCAGGACTGCTTCCACAACTTTGATCA Gene GeneID:787645|LOC787645:XM_002688915:216_cdna Constitutive 0 NULL GeneID:787645 7 GENE LOC787645 NULL similar to scaffold attachment factor B EMBV3_28990 AGGCCTTGGTGACATGGCGGTCTCTAACACCATAGGAAGCAACGTGTTTGACATCCTCGT Gene GeneID:615739|SLC24A4:XM_002696817:593_cdna Constitutive 0 NULL GeneID:615739 21 GENE SLC24A4 NULL solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 EMBV3_33597 TCTTTGCATTGATCACTGAGGCTTTCTTATCACTCCTTGCTATTTTTGGGAACTCTGCCT Gene BVV0101_057785 + 1 EMBV3_11595 GK000012.2:62670238-63213642 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16434 CAAAGGCTGTGGGTTTGGTCTTTGGGGGATGGGAGAGTACTTCTTGGAGGGCTTCATTGA Gene GeneID:507541|AMFR:NM_001045974:135_cdna Constitutive 0 NULL GeneID:507541 18 GENE AMFR MGC134057 autocrine motility factor receptor EMBV3_09799 TACAGCTCTTTCCCGCAAAGCCCAGGGTGTGTTTGTTAACTTCCTTCTCCAGTGGAAACG Gene BVT0101_019216 + 1 EMBV3_06766 GK000021.2:55946436-55947479 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121622 TCONS_00121624 TCONS_00121623 1 XLOC_073442 Coding TCONS_00121622 XLOC_073442 Coding Coding ELL3 21:55946521-55950835 = TSS90548 2720 1 TCONS_00121622_1 395 0.0797794117647059 11 0.371898910271273 9.41800548805947e-05 1.70267169460859e-29 8.41112776830467e-05 4.05839736187744e-05 0.000152396290014181 5.02119278080123e-05 1.16698122085591e-05 0.000267107025130234 2.87433815214655e-05 3.98032626690618e-15 2.53596829147794e-24 1.53155188801559e-21 2.49825253081012e-26 0.000125471633685179 0.000395742575418381 0.000156751159797647 0 3.6526341973533e-05 0.000237781937122868 0.000150526065723847 3.8044856604036e-29 2.96623230719365e-05 0.00015169394329539 0.000221489236379192 9.04491084103935e-05 5.75663991401259e-05 1.17397182047441e-05 5.78987126325413e-35 4.76586585648084e-49 3.23456300690963e-39 NM_001046126.2 ELL3 Bos taurus elongation factor RNA polymerase II-like 3 (ELL3), mRNA. 0.0 3173 99.94 0.647426470588235 NM_025165.2 ELL3 Homo sapiens elongation factor RNA polymerase II-like 3 (ELL3), 0.0 1662 80.50 0.640808823529412 TCONS_00121622_1 sp|F1MGG3|ELL3_BOVIN 0.0 811 100.00 0.99746835443038 2 coding 0 0 0 0 -1.36545144422109 0.0106820183338346 0.0558309558793452 0.330476749402339 AGTCCCGCACAGCCGAGGTGGTAGTGGCTCGGGTCTGTGGCTCGCGCTCTACCTGCCCCTGAACCTCGCAGCCATGGAGGGACCCCAGGAGCTTCTGAGTGGGAAGCTCCGGCTCTGCTTCACCCCGGCTGCCCGGACCAGCCTCCTACTGCTCAAGCTCAACGACGCAGCGCTGCGAGCGCTGCAAGAGTGTCATCGGCAACAGGTTCGGCCAGTGATTGCTTTCCAAGGCAACCGAGGGTACCTGAGGCTCCCAGGTCCCCACTGGTCCTGCCTCTTTTCCTTCATAGTGTCTCAGTGTGGCCAGGAGGGCCCTGGTGGTCCAGGCTTGGACCTTGTGTGCCAGTGCCCAGGCAGGTCTGGGCCTAACCGCCTCCACTGCCTGGGTCCACTCAGGGAGCGCCTCACGATTTGGGCAGCTATGGATTCTATCCCAGCTCCATCTTCACTTCAGAGACACAACCGGACTGAAGATGCCAGGGACCGTGAGAGCTGGCAGAATGTGGGAGACTATCCTGAAGCAGACACAATTTCACAGTCACAGATGGGACTAGAAGAGGTGCCAGACCCACTGGCAAGCAGCCAAGGACAGTCACTCCCAGGATCCTCGAGGGAACACATGGCACAGTGGGAAGTGAGGAACCAGACCCTTCTTCCAAACAGAGATCCTGATCAGGCACTGCCTCCCTCTGCTAGCCAGAAACATGTGGACAAGAAACGTCCAGCGCCTGCAGCTATGGTAGAATTAAAACAAAAGAGGCTCAGAACTCTAGCTCCAAGTCCCCTACAAGGACTGCCCAGTCAGGACTTACAAGAGGAAGACTGGGAGCAAGAAGATAAAGATGAAGACATGGGTCCCAGGCTGGAGCACAGTCCCTCAGTTCAAGCAGATTCTGAATCTCTAAGCCCTGAAGAAGTACCAGATTACCTCCTGCAATACAGGGCCATCCACAGTGCAGAACAGCAACATGCCTATGAGCAGGACTTTGAGACAGATTATGCCGAATACCGCATCCTGCATGCTCGCGTTGCGGCTGCAAGCCAGAGGTTTATAGAGCTGGCAGCTGAGATGAACAATGTTCAGCGTGGAACTCCAGAACACAAGGCGCTGGAAGAAAAGATAGTCCAGGAATATAAAAAGTTCAGGAAGCGGTACCCAGGTTACAGGGAAGAGAAGCGCCGCTGTGAGTACTTGCATCAGAAACTGTCCCACATCAAAGGTCTCATCTTGGAGTTTGAGGAAAAGAACAGGGGCAGCTGAAGCTGACACATGGCTCTTTACTCTTGTATGATATGAAAGAAAAAAGCAGCTATTAACTAAGAGGACAGTTGTCTGCTGTTCATATTGCTGAGTCCATAATGGCAAGTAGGAGAGCTGCTCTAGGTTCTTGAGGTTTGGTTTTCATTATTACCATATTTAAATTTTTAGGGCATGGGCACAGAGCCAAGACTCCACAGCTGTGCCCAGGAGTTATCCAGTAATGAAAACTAGGCAAAGTAGCAGACGCTTGGCTTCTCCACCGTTAGTTCAGCCAAGTCATTTTCAAATCCTGAGAAATGACACCGTTTCCAAGACAAGATACCTTGAGAACATTAGAATTTACCTGGTAGCCTCCCTGAAAAAACCTTTGGTAACAAAGCTAAAGGAACTTGTAATACAACAGGACATAATGGGAAAGGGCTTGGGCGTTACCCATGTATTAGAAGTGAATTCTTTTACAAACATGGCTAAAAAAATTAAAACGGATTGCTTCTGTGTCAAGTTTTGTTTTCCTTAAATCCTCCAAGGTAGCGGTTCTCACCCTTGCTTGTGTATATGAACCACTTCTGGGGCTCTCTAAAAAATTAGATCCTTAGATCCCAGCCCAGGTCTTTTTTAAAAAATATGTATTTTATTATTTTATTTGGCTGTGCCGAGTCTTGGTTGTGACATGTGAATTCTCAGTTGCAGCATGTGGGACCTAGTTCCCTGAACAGGGAGATCAAACCTGGGCCCTCTGCATTAGGAACGTTAGTATACTCTCCTTCTCCAAACATGGAGGATGAGGATCACCTGCAACTAGGGCTCCTATCTACAATTATCCAGTAACTCAAAACTATAACTGTAGATAGGATTTGGATTTACCCAAAAAAGGAAGAGGGAAATGGTTCAATTCTTTTGCCAGTCCTATCCTTTTTGTTCCTCACTGCTGCATAAGAAAGTGGATATTTCACTCACAACCAAGGACACTGCCTTTCCCGTTTCCACTGGAGAAGGAAGTTAACAAACACACCCTGGGCTTTGCGGGAGAGAGCTGTACCCGGCACTGTCAATTCCTGAAACAGCTTGAATGAACCCCAACCTGGTGCCACACCCACACAGGGCATTTCTGGGCAAGGAATAGCCCTTGGGAGGTATAAACATGCTCAGCTGCATGGCAAGGATAAATAGCAACCCAACCTTAGGGCATGGGAGGCCAGCAACAGCCCAACAAGAAAGGTCCTTCACCTGTTCTAATCATCAGGCTAGGGTCCTGTGCAATAAACACATAAGGATAGAAGGAGATGAAATTTGGAAATCATTTGCAGGTGATCAACTATGGACCCAGTGCAGACAGCTGAACGGACCATCATGGTAGTTACTCGCCCTACACATAACTATTTAATGAAAATCTAAAATATGGTTCTAGCTGCATTTCAAATGCTCAACAGCAATAGGTATTAGGCAATGAAGATTATAG EMBV3_31945 AACTTATCAACAGGAAACAGGTCAGGAGCCCTGTAGCAGCAGGAAATGTGAGAAGTCTGC Gene GeneID:536944|CLEC1A:NM_001076081:46_cdna UTR3_Alt 2 NULL GeneID:536944 5 GENE CLEC1A NULL C-type lectin domain family 1, member A EMBV3_42206 GGTCTTCAGCATGCCCCTATGTAGACCGGATATGGTTGAGAAAAGAATCTTTGAGCTTGG Gene BVT0101_021532 + 0 NULL GK000001.2:52364913-52548840 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11106 AAAACTTTGATGATTACATGAAAGAAGTGGAGCATCGTAAACTTAGATGAAGGTGCTCTG Variant GeneID:281759|FABP4:NM_174314:257_cdna 134^306 1 EMBV3_34699 GeneID:281759 14 GENE FABP4 NULL fatty acid binding protein 4, adipocyte EMBV3_34499 ATTAATCTGGGCACCAGCTAGTTCCATAGCAATGACTTCCCTCACCACTCATCTCTCGGC Gene BVT0102_123595 + 0 NULL GK000029.2:42859650-42867834 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163769 TCONS_00163773 TCONS_00163771 TCONS_00163778 TCONS_00163772 TCONS_00163780 TCONS_00163781 TCONS_00163779 TCONS_00163775 TCONS_00163782 TCONS_00163777 TCONS_00163774 1 XLOC_100023 Coding TCONS_00163782 XLOC_100023 Coding Coding MARK2 29:42854517-42866794 j TSS122692 3166 1 TCONS_00163782_2 517 15 0.743320299771913 0.0159399773089392 0.0135121486139662 0.0042096131465095 0.00444560710084892 0.00269088419169675 0.00226476119037122 0.00429084894069726 0.0054722239408648 0.00719936308840442 0.00394792751777412 4.32126608867041e-09 3.33808123768297e-18 0.000514761962714172 0.000857419595442989 5.16995480816292e-23 2.40526078071767e-28 9.81190616096828e-05 0.00099962391402244 0.0039195604376197 0.00765336839099824 0.00732164468107858 0.00211724325611031 0.000284535668895552 0.002011598322924 0.00784646204057256 0.00329674491763004 0.00583262738619297 0.000562964572529213 0.000667017008449113 5.11804137885639e-20 XM_005227123.1 MARK2 PREDICTED: Bos taurus MAP/microtubule affinity-regulating kinase 2 (MARK2), transcript variant X2, mRNA. 0.0 2583 99.93 0.452937460518004 XM_005273813.1 MARK2 PREDICTED: Homo sapiens MAP/microtubule affinity-regulating kinase 2 (MARK2), transcript variant X1, mRNA. 0.0 2246 94.70 0.452937460518004 TCONS_00163782_2 sp|Q7KZI7|MARK2_HUMAN MARK2_HUMAN Serine/threonine-protein kinase MARK2; 0.0 950 97.73 0.934235976789168 3 coding 0 0 0 0 -0.0535940318192693 0.719268327540299 -0.450542977032872 0.00345760451963306 GTCCCTGATTTTGTTTCACAAAGAGAGCGTGAGTGTGTGTAGGTGGATTTGATTAAAATTGGCATCAGCTATATATAGGAGTGGCTTCTTCTGTCACCACCCGGAGGCCCAAGAGAGAAAGATGCACCCACGAGTGCCGAGCCCTCTGGCTTCCCTGTTCCGTGAAGTAAGAATAATGAAGGTTCTGAACCATCCCAACATAGTTAAGTTATTTGAAGTGATCGAGACTGAGAAAACGCTCTACCTGGTCATGGAGTACGCCAGTGGAGGAGAGGTGTTTGATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGTGCAGTACTGTCACCAGAAGTTTATTGTTCATAGAGACCTAAAGGCAGAAAACCTGCTCTTGGATGCTGATATGAACATCAAGATTGCAGACTTTGGCTTCAGCAATGAATTCACCTTTGGGAACAAGCTGGATACCTTCTGTGGCAGTCCTCCTTATGCTGCCCCAGAGCTCTTCCAGGGCAAAAAGTACGACGGACCCGAGGTGGATGTGTGGAGCCTGGGAGTTATCCTGTACACACTGGTCAGCGGATCCCTGCCTTTTGATGGACAGAACCTCAAGGAGCTACGGGAGCGGGTACTGAGGGGGAAATACCGTATTCCATTCTACATGTCCACAGACTGTGAAAACCTGCTCAAGAAATTTCTCATTCTCAATCCCAGCAAGAGAGGCACTTTAGAGCAAATCATGAAAGATCGGTGGATGAATGTGGGTCATGAAGATGATGAATTAAAGCCTTATGTGGAGCCACTCCCTGACTACAAGGACCCCCGGCGGACAGAGTTGATGGTGTCCATGGGTTACACGCGGGAAGAGATCCAGGACTCACTGGTGAGCCAGAGGTACAACGAGGTGATGGCCACCTATCTGCTCCTGGGCTACAAGAGCTCCGAGCTGGAGGGCGACACCATCACCTTGAAGCCCCGGCCTTCAGCTGATCTGGCCAATAGCAGTGCCCCCTCCCCCTCCCACAAGGTACAGCGCAGCGTCTCCGCCAACCCCAAGCAGCGGCGCTTCAGTGACCAGGCTGGCCCTGCCATCCCCACTTCCAATTCCTACTCTAAGAAGACTCAGAGCAGCAACGCAGAAAACAAGCGGCCTGAGGAGGACCGGGAGTCAGGACGGAAGGCCAGCAGCACAGCCAAAGTGCCTGCCAGCCCCCTGCCTGGCCTGGAGAGGAAGAAGACCACCCCGACGCCCTCCACGAACAGCGTCCTCTCCACCAGCACAAACCGAAGCAGGAATTCCCCACTCCTGGAGAGGGCCAGCCTTGGCCAGGCCTCCATCCAGAATGGCAAAGACAGCCTAACCATGCCAGGGTCCCGGGCCTCCACGGCTTCTGCTTCCGCCGCGGTCTCTGCGGCCCGGCCCCGCCAGCACCAGAAATCCATGTCGGCCTCCGTGCACCCCAACAAGGCCACTGGGCTGCCCCCCACGGACAGTAACTGTGAGGTGCCGCGGCCCAGCACAGCCCCACAGCGTGTCCCTGTCGCCTCCCCCTCCGCCCACAACCTCACGTGGTGGGCAGCGGTGGCAACGACAAAGAGAAGGAAGACTTTCGGGAGGCCAAGCCCCGCTCACTGCGCTTCACGTGGAGCATGAAGACCACGAGCTCCATGGAGCCCAACGAGATGATGCGGGAGATCCGCAAGGTGCTGGACGCCAACAGCTGCCAGAGCGAGCTGCACGAGAAGTACATGCTGCTGTGCATGCACGGCACGCCTGGCCACGAGAGCTTCGTGCAGTGGGAGATGGAGGTGTGCAAACTGCCGCGCCTGTCTCTCAACGGCGTTCGGTTTAAGCGGATATCAGGCACCTCCATGGCCTTCAAAAACATTGCCTCCAAAATAGCCAACGAGCTTAAGCTTTAATAGGCTGCCAGGAGTGGGGGGCGCGGAGGCGGCCAGCTGGACTTCACTGCTGGGCCGGCGCTCCGCCCGCCCGGGCCAGACTGCAGAGATGGGTCGGTGTGTCTCCCCTGCTGGCACTTCCCCTCCCCGCCCTTCTCAGTTTTTTCTTCCATGTTTGTGGGGGATGGGAGATGGTTCTCTCCCCCTCCCCACAGTTACCCTGCCCATATAGCCCCCCTTCCCTCCTCTCTCCCACAGGAGGCAAAGGAAGGGGAGGGAGGGGGTGGGGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTTTTTATTACCAAAAAGAAAAAAGAAAAAAAAAATTTCCCAGCGGCCACCTTTCCTCCCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAGGGCTGGAACACTCTCAGGCAAGAGTGGTGGAGTTCCCTGTCAGGCCCTCCGCCAGGCCCACTTTGGGCTTCTCCCCTCTCCTCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCCCTGACCTCAGGCCCCTGGGCTGGAGGCCTGGGCGGCTGGGGGCTGGGGCGGGGGTGCCGCGCAGCCCAGAAGCGGGGGGCTGGCGGCGGCCTGGGGCTGGCAGGCTAGGCACGGGGCTCGGCCTCCCTCCACACTGTATCCTCTGCCCCTCCTTTCCCAGAGGCTGGGCATTTCCTTCCACAAGCTGCTGTGGGGACATTTGTTCCCCTCCTCAAAAAGTCTGTGCCATCTTCTCCCATCTCCTCCTGGGTAGAAGGCGGGGCTGACCCCAGGGCTGGGAGGGGAGGGGACCGCAGGGCAGATGGGCTCGCTGGCCCCCGGGGGCTGCCCGGGCTGCTAGTCTCCGGAATAGGGACGATGGCATCCTCCTTTCTGGGAGAGCCTTTGTCTGAAAGCACAGCCCCCTCACCGGTCCTCTCCCTGCTGCCCCTCGTCATTGGCATTAATCTGGGCACCAGCTAGTTCCATAGCAGTGACTTCCCTCACCACTCATCTCTCGGCCTTGCCTTCTCTTCCTCACACTGTCGCCCCTCCTCTCAGGAGACACTGCCCCGGGCCTCCAGGGCCGCCTGGCCAAGGCTGCGGAGGGCAGCGGGGCCGGGAGCCTCTGCCTCCACGGGGTTGGGGGGCAAATAGGCCAAGGGCCTCCCAGCTCNN EMBV3_13211 GACTTTCAGCCAGAGCACTTACCTCATTCAGCATCAGAGGATTCATTCAGCAGAGAAGCC Gene GeneID:515674|ZNF184:NM_001100372:19_cdna Constitutive 0 NULL GeneID:515674 23 GENE ZNF184 NULL zinc finger protein 184 EMBV3_40308 AGATGAAAGCCTGATTGCCAGATACTGTCTCTATCCTTGCTGTAGTAAGACTGGCAGCTA Gene BVT0102_148430 + 0 NULL GK000030.2:114170385-114437599 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253649 1 XLOC_156588 NonCoding TCONS_00253649 XLOC_156588 NonCoding NonCoding - X:114346813-114347663 - TSS190870 850 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000559304446286882 0 0.00144641907873966 0 0 0 0 0 0.000216954118325577 0 0 0 0 2.85565223241521e-05 0 0 noncoding CGCCATAAAATAGCCCTGTATGTAAGGTGAAGTAACAGTGCTGTGCTGCAAGTGAAAGTTTGTCGGTGATTCTGCTTCTTCTGAATAAAGGAATGAGTGAAAAGCTATTCATTGAGGATACTTCATAGATCTCTAAACTCTTCCAATTTAAGTTTGAATTCTTCAACCCTATCCATGATGGTACGTATTTTTCTCCTAGAATACCACATTACTCAGACCCAGGGAATAAGCAGTTGATACCTGTATGCATGATGCTGAGGTGGTAGTCAGGACCTTCTGGAAATATGAGATGAAAGCCTGATTGCCAGATACTGTCTCTATCTTTGCTGTAGTAAGACTGGCAGCTATTATTCAAAATTGCAATATGAGGTGGCTTGACAAAATAAAAGTTTATTTTTCATGGCAAGTTTGGATGCAGGCAGGATAATAATCCCCCAAATAGTGATTCAGTGATATTACTGGAATAGAATTGCTCTACATAAATATAATATGCTACTATTTTTATCCATAAATTTTAACATGTCATGTCTATCTAATAGAAGAAATTCAGACCGGGATTAATGTTGGAGCATATAAAAGATCTTTTAATTAATTAATGGAGAGTTTTGAGGAATATTAAATCTACCCTGTTCCCCTTTCTCTCATCAAGCTAAATATTGACTCTGTGCAACTGAAAATCTCTTCTTTCCTGGTTTTTCCTCTAGCTGTTAATACTAACATTGATGTATGTAAAATATTTGAAGATTATGAGAAGGATAGACTGGTAAAGTATGACTTAGCTTTACAACTGAAGTTTTAAAGGGCAAAAATCAAACTCTGAACTGAAAAACTAAATAAATGTTTTTACTTT TCONS_00248071 . 3' 89937 TCONS_00248071 . 3' 90786 EMBV3_38048 TCACACTGCGAGAGCCCCTTCACTCCCAAAAGATGTGTCTTACGAGAAACCAACATGGCT Variant GeneID:520049|WEE2:XM_002687075:235_cdna 346^594 2 EMBV3_23426 GeneID:520049 4 GENE WEE2 NULL WEE1 homolog 2 (S. pombe) EMBV3_33786 TGCCACTGGTCAGGACAACCTTTCACCTCAAGTAGGATTAGCAAAGGCTTATGTCCTCGG Gene BVV0102_368022 + 0 NULL GK000025.2:26960486-26993373 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146711 1 XLOC_089183 Coding TCONS_00146711 XLOC_089183 Coding Coding LOC100847190 25:26973763-26979747 j TSS109620 1936 1 TCONS_00146711_3 215 0.138429752066116 5 0.677252214608056 0 0 0 0 0 0 1.23599569113049e-10 0 0 2.1252567463848e-06 3.5472919740511e-06 7.01837189098085e-05 0 0 2.51314265814908e-11 0.000777616408365694 8.27574413030914e-12 3.88805394443619e-05 0 0 0 4.78431431372147e-05 2.36932322731943e-06 0 0 0 0 1.98453107508668e-05 5.01509126217183e-06 1.86329594164586e-05 XM_005196971.1 ZNF764 PREDICTED: Bos taurus zinc finger protein 764 (ZNF764), transcript 0.0 832 100.00 0.237603305785124 XM_005255509.1 ZNF747 PREDICTED: Homo sapiens zinc finger protein 747 (ZNF747), 9e-94 349 78.24 0.222107438016529 TCONS_00146711_3 sp|Q96H86|ZN764_HUMAN ZN764_HUMAN Zinc finger protein 764; 2e-46 161 62.14 0.646511627906977 1 coding 0 0 0 0 -0.00862895290582316 0.94799876758358 -0.0131102848405841 0.798912354911227 ATGGCGCCGCCCCCGGCCCTGCTCCCCGCGCGGGAACCTAACGGGGTCAGGCCCCAGGGGGAGACATCCGAGCCCGTGAGCTTCGCGGACGTGGCCGTGTACTTCTCCCCGGAGGAGTGGGGGTATCTGCGGCCTGCGCAAAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTATGGCCACCTGGGCGCGCTCGGCTTCCGAGGCACCAAGCCAGCCCTCATCTCCTGGGTGGAGGAAGAGGCACAACTGTGGGGTCCAGATGCCGGGCCTCCTGAGATGGGAGAATGTGTTACAGAAGCAGACACAGCAGGTTCCGGAAACCAGGCAGAAAAAGGACAAAGAGGAGGGAGGGAGGCACTGGGGAAGATTCCTTCTGTGGATGCTCAGCTTCCCGGGCTGACGGCTTTCAAACCCCTCTCTGCTGGCTTTCCTTATGGTTGGCAGCAGCCACGGAAGGTGATGGAAGCAGCCAGCCATGGACAGACAGACTTTCCTGCCACTGGTCAGGACAACCTTTCACCTCAAGTAGGATTAGCAAAGGCTTATGTCCTCGGTTGCCTTCTGACAACTCAGCCCTGTGTCTGGCCTAACTTAGGAAGAAACCAGATCTGTCAACCTAAAGGAACTTCTAAAGGAAGAGCTTGAAAATTTGGGGAAAAGACACTGTTGAGCACTGCCTGAGGAACTCACAGCCTGCAATACCAGTTCTCAGCTCAGCCTCAAAACCAGATCTAGACCCTGCCCTGAGCTTGCAAATTAAAAGTATTGTAATTACTATTTTCTCTTGAGTACTTTGAAGTTTTCAAGGCTTGCTTAGGGCCCCCAAACCAAATCCAACTCCTCTGCTTCCTGCCCTCCTGACCCAAATCTCCTCCACTTAATGAATTTTCGAGTGTCATGGAACACCTAAGCCTCAATCTTGCCCCCTTCTTAGCTCCTCACTCCTTGGCACGGATTCTTCCCCCCGGCCCCGCCAAAGATAGCGCTTCTCTTTAATTATTGGGTACACTGGGTCTTCACTGCTGTGCATAGGATTTCTCTAGTTGCAGCAAGTGGGGGCTACTCTCTAGCTGTGGTTTATGGGCTTCTCAGTTCAGTAGTTTTTCTTGTTGCAGACCATGGGCTCTAGAGCATGCAGGCTCAGTACTTGTGGCTCACAGGCTTAGTTGCATCCGAGGCACGAGGATCCTTCCCAGACCAGGGACTGAACCCGTGTCCTCTGAATTGGCAGGCAGATTCTTAACCACTGGACCACCAGGGACCTACCATAGGTCTTTGAGGCTCAGTCCGTGAAGCAAGTTAAGCCAGGAAGAGGGTTTTTCTAGGGCTTCTTTGGTGCATCAGGAGAAATGCTAATCTGTACTAGTGAAAACCTGAGCCCTATCCACATGGTCTATCCCTAATGTGTTCAGGCCATGTAAAGGGTATTGATTTGAGCTCCAAAGACCCCCTAAGTCTGGGCAGGGTCGGGCGGGGGGGCGATATTTGTTTATGTGTATCTTTCTAGGAACATGTGCAAAGACATTTATGATTCAGAGGCTAAAATCTGCCCCAGACCAGTACTTTTCAAAGTGAGGCCTTTTTGCTGCAGAATTATATGCAGTATCTTTTCAGAAAGCAGCTGTCTCCCTGGGCCCTGTCCCTAGTCTGTTGAATCAGTATTTCCAGGGATGGAATCTTATGCCTGCTAAAGTTTGAGAGGACGACTGCTCTGAACAGAAAACTTATTTTTCTGGCTGATCTTAGCTTTACAAGTGTAGGGGTTGGTCTCTGGGCATGTTCCGAACGTGTCAGGCCAGCCAATGACCTTGCCATACACACAGACTCCCATTTCCTTTGTTCTTCCCAAAAGGGCCTGTGCCATGACTGGTCTTTTCCTGGATACCTTAAATCTTGAATATACCAGGACATCACTTGTAGCATCTGACAGGAC EMBV3_21907 AGGCCCTCGAGTAGTCTTCTAGGGACAGCATTCAGTGAAGGAGAGCGAGGGCCCTAGAGA Gene BVV0102_201727 + 0 NULL GK000005.2:27067632-27068593 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194362 TCONS_00194366 TCONS_00191224 TCONS_00194363 TCONS_00194361 TCONS_00194368 TCONS_00194364 TCONS_00194367 TCONS_00191223 TCONS_00194365 TCONS_00191225 2 XLOC_117730 XLOC_116844 Coding TCONS_00191223 XLOC_116844 Coding Coding SPRYD3 5:27054211-27068648 = TSS143333 2574 1 TCONS_00191223_4 435 11 0.82245774452757 0.000697933567565273 0.000669137934689728 2.14336954834509e-18 0.000278433437693935 0.000375005291720117 0.000143358145642304 0.00045432298285464 0.00029534385076662 0.000362574583564696 0.000224810002701292 5.50427313434844e-05 7.94352413213219e-06 0.000216501396560897 3.2121125742807e-05 3.36825004944028e-05 0.00188884924818947 1.31684977311682e-216 3.23158650208724e-23 0.000508208575661579 4.15681857651543e-16 3.12240752534656e-05 0.000170331732489676 9.41172959639213e-05 0.000219300605184319 4.92453299280408e-13 0.000387167455308983 3.0503096457598e-101 4.12386332933828e-05 3.3136169349322e-05 0.000118474386057595 XM_005206225.1 SPRYD3 PREDICTED: Bos taurus SPRY domain containing 3 (SPRYD3), transcript 0.0 4529 99.03 0.98989898989899 NM_032840.2 SPRYD3 Homo sapiens SPRY domain containing 3 (SPRYD3), mRNA. 0.0 2498 81.55 0.999222999222999 TCONS_00191223_4 sp|Q8NCJ5|SPRY3_HUMAN SPRY3_HUMAN SPRY domain-containing protein 3; 0.0 808 97.06 0.997701149425287 1 coding 0 0 1 1 -0.0770142166294121 0.529259862212777 0.0098119048560167 0.854465808705594 GGGCGGGGACCCGGATGTGTGTGGTGGCGGCGGCCGAAGAGCTAGTGTGCGGAGCTGAGAGGCCTATGGATGAGGAGGACGCGGCGGCCCCGGTTTGTTCTCATGAACAAGATGGATGACCTCAACCTGCACTACCGGTTTCTGAATTGGCGCCGGCGGATCCGGGAGATTCGAGAGGTCCGGGCTTTCCGATATCAGGAGAGGTTCAAGCATATTCTTGTAGATGGAGACACTTTGAGTTACCATGGAAACTCTGGTGAAGTTGGCTGCTATGTGGCTTCTCGACCCCTGACAAAGGACAGCAATTATTTTGAGGTGTCGATTGTGGACAGTGGGGTCAGGGGCACCATTGCTGTGGGACTGGTCCCTCAGTACTATAGCTTGGATCACCAGCCTGGCTGGTTGCCTGACTCTGTGGCCTACCATGCTGATGATGGCAAGCTTTACAATGGCCGAGCCAAGGGTCGGCAGTTTGGGTCAAAGTGCAACTCTGGGGACCGGATTGGTTGTGGCATTGAGCCAGTGTCCTTTGATGTGCAGACTGCCCAGATCTTCTTCACTAAAAATGGGAAGCGGGTGGGCTCCACCATCATGCCCATGTCCCCGGACGGGCTGTTTCCGGCAGTGGGCATGCACTCGCTGGGGGAGGAGGTACGGCTGCACCTCAACGCCGAGCTGGGCCGCGAGGATGACAGCGTCATGATGGTGGACAGTTACGAGGATGAGTGGGGCCGGCTGCACGACGTCCGAGTCTGTGGAACCCTGCTGGAGTACTTGGGCAAGGGCAAGAGCATCGTGGACGTGGGGCTGGCCCAGGCCCGGCGCCCACTCAGCACCCGTAGCCACTACTTTGAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATCGCCTTGGGGCTGGCCCGGAAGGATTATCCCAAGAACAGGCACCCTGGCTGGAGCAGAGGGTCTGTGGCTTATCATGCAGATGACGGGAAGATCTTTCATGGCAGTGGCGTGGGGGACCCTTTCGGGCCACGCTGTTACAAAGGGGACATAATGGGCTGTGGAATCATGTTCCCCCGGGACTACATTCTGGACAGTGAGGGTGACAGCGACGACAGCTGTGACACAGTGATCCTGTCCCCGACTGCCCGAGCTGTGCGGAATGTCCGGAATGTCATGTATCTGCACCAGGAAGGGGAGGAAGAAGAGGAAGAGGAGGAAGAGGAAGATGACGGGGAGGAGATAGAGCAAGAGCACGAGGGCAAGAAGGTGGTGGTGAGCNNNGGCAAGAAGGATGCTGTTGTACCTTCTGGAGGCTTCTTCCCCACCATTGGGATGCTGAGCTGTGGGGAAAAAGTCAAAGTGGATCTGCACCCCCTGAGTGGCTAGGCCTTCTCCCCGGACCTGCCCCTCCCATTTGTCCCCTCCCTTTGCAGAACCAGGTACCGAGTTCCTGACTCCCTGAGCATCTGCCTACCCAGCAGGCCCCAGAGGGTGTGTTGGCACTCTGCCCCTACCAGATCAGGCCCCTGCCAAGCTCCTCCATGCCCACGTTTCTGCCCCAGGGCTGCCCCAGTCATCAGTCCCTGGGCGAGAGACCCTGGTTGGACAGAAACAGGCCTGAAGGGTGGTGCTCTATGGCCAGGTCCCCTTGGTTTGGGGCATGGGCGTGCCCCCTTCCGCACTGGCGCGTGTGAGGGGAAAGGAGTGAGTGCTTCTGTCTCAGCTGCTGCTGGGCCTGAGACTTTAGAGAGTGGAGCGGGACAGCCCTCCCTGTTGACCGGTGTTCCGGGGCAGCTGTCTTCTGTTCCCTGTCCTCGTCATTGTGTGAACCAGCTGCTGCTGTCACCCCCCTGGCTGGGCTGGGGGGCTCTCTAGGGCCCTCGCTCTCCTTCACTGAATGCTGTCCCTAGAAGACTACTCGAGGGCCTCTCTTCTCTCCCCCCAGAGCCAGCTTCCTCCCTCACGACCTGCTGGGGCACCACGGTCCCCCGAGAACCCCGTCTGGCTCCCCCAGCTGTACACACGTAGATGGTGCCCGTGACATGTAGAGAGAGGGGCTGAAGGTCCCGGAATGGAGCCTTTGCTGCTGTCTCCCTCTGGGCCTCCTCAGCTCACCTGTGGCACCTTTGTCTCTAGTTCTGAGGATGCAGGTTGAGACCACAGAGCCTCTCTCTCCCACACGGTGAGGGCAGGGCCCCAGAGCCCAGTAAGAGCCCGTGCTCCCCTGCCCCACCCGCACCCTGCTTGTTGCCTGCGCCGTTGCCTGTTTTGCTTCAGTGTTTGATCTAGCACTTACACATGTCCTCCCCCACCAAGCCCTCCTGTCTCCTAGCCTCTTGACCCCGACCCCTCCCCACACAGTAGCTTCCGGGAGGGAGAGGGAGCAGGAGTTTGGGGAGAGTGGGCAGGGCTTTAGGGGAAGCAGTGAGCTGTTGTACTGCGGGGGCCTCCACTTTGGCCCTCCCTTCAGGCCCTGCACTATGATGTATGAAATGTATGTACAGACCAGAGATGTTTATACAGCCAATAAAGATGGAGTTTCCATATTTATCAGTACAGCCGGGACAGGGGAATCCTTTCCAG EMBV3_28960 CGAGTGAGTTGTGGTATAGGGTTTTGTGGGTAATTTGTTTTTTTAAGTTGTGGGGGGAGT Gene GeneID:781149|AFF1:XM_002688397:56_cdna Constitutive 2 NULL GeneID:781149 6 GENE AFF1 NULL AF4/FMR2 family, member 1 EMBV3_09684 ACCTGCATCATGGCCCTGGCTGCTTCTCCTGCATCGCTTTTCCTGTGGAACTACAATCAT Gene GeneID:534848|POLA1:XM_002700323:35_cdna Constitutive 0 NULL GeneID:534848 X GENE POLA1 MGC157406 polymerase (DNA directed), alpha 1, catalytic subunit EMBV3_08845 TTTAGCTTGGAGACCTCTGCTGTCAAATCTCTGATGGACTGTCCCAGGAGGGAGAGGAAT Gene BVV0102_169455 + 0 NULL GK000005.2:109737011-109855400 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196386 1 XLOC_118324 Coding TCONS_00196386 XLOC_118324 Coding Coding MICAL3 5:109661889-109819117 j TSS146153 9941 1 TCONS_00196386_15 1960 0.0288703349763605 32 0.936976473506459 0.000413651136343367 7.13141400993175e-05 0.000471082184271868 7.84389695015606e-05 0.000251253747518656 0.000218443616059857 0.000139702190263456 1.323985495719e-05 0.000135260493049697 0.000106526106803403 4.2156840840129e-169 9.20302833150785e-107 3.97166353779684e-05 2.20159930084577e-06 1.00411945357654e-05 3.41120479679402e-116 2.35232619198086e-94 1.46741016000427e-105 0.000339467188889604 0.000110649546019506 9.62156182603701e-263 8.87956451608438e-164 5.37003221868961e-06 5.92677358629226e-05 0.000173955786373219 0.000194459229966421 7.21807535456443e-05 3.67271570480747e-109 3.82520873206279e-92 4.91496154093917e-05 XM_002687919.3 MICAL3 PREDICTED: Bos taurus microtubule associated monoxygenase, calponin and LIM domain containing 3 (MICAL3), transcript variant X1, mRNA. 0.0 1.479e+04 100.00 0.824766120108641 XM_005261262.1 MICAL3 PREDICTED: Homo sapiens microtubule associated monooxygenase, calponin and LIM domain containing 3 (MICAL3), transcript variant 0.0 6011 80.95 0.620762498742581 TCONS_00196386_15 sp|G3MWR8|MICA3_BOVIN MICA3_BOVIN Protein-methionine sulfoxide oxidase MICAL3; 0.0 3994 100.00 0.999489795918367 0 coding 0 0 0 0 0.0348124442012937 0.813600768847507 0.0103843820431311 0.823450303527644 AGGGAACTGGAAGTCACAGAGTCAACGTTTCCCAAAGCAGGTGTCTGGTGCCACCCACATCAATTTGGGCCATACATGTGGAGGATGGCCTTGGAGAATGAAGGGTATCCTCCTCCAAGCTCTTGGCTGCACGGACCCTGCATTTTCCTGAGCTCACTTGCGGATCACCCTGTTGTGAGCCAGCAGTGATGGGAAATCCTCAGACTGAGCAGAGAGCTGGCTCCACTGACCTGCGTCTCTAGTGGCCCTGCTCCTGCCCTATGGAGGGCCACATTCCTCTCCTTCCTGGGACAGTCCATCAGAGATTTGACAGCAGAGGTCTCCAAGCTAAACTGGCACAGCTGCTGGGCCCCTCATCCCTGGGAGCAGAGCTCAGGCCCTCTCCATCTTCTGGTGGATGGACTCCAGTGTCCACGGTGTACCACATGGACGGCCCCAGTTGTGTGGGCAGCACCAGGAACCGCAGATGGGTCCCTATCTCTCTGCTCCTGTGGCTCCTGAGGCTGCAGAGCTGTTGGAGCAGCTGTTGCCTAGCCGGGGGCCTTTACTTTCATAAATAAGTGAATGAAAGGTGGGATTCTAGATATTCTAGGAAGTTTTCCCCAACTTGGGCCAACCCCAGATGGCCTCCTGCCTTCAACTGTGTGTCAGTTCTGTGTGTCAGAGAGGACTGGGTGGGAATTCCAGCTTTACCTTGATCTGCCTGTGTAGGTTACACAAGTAAGTAAATTCTTTGTGTTCTTATGTTCTTAGCTCATAAAACAGTGATGTAAAATCTCACAGGCTGACCCAAGGATTAAACGAAATAACCCACGAATAGCCTAGGCACAATGTCAGAGCTCCATAAAAGTGTGTTTCCTTCCCTTATTTTGGAACTGGAGCAAAACACCTGCAGATTGAGGTAGAGCAGACACGGAGGCAGAGTGCTGAGACGAAGAAAGGACTCTGGGTGCTAAGTTGGAACACCTCTGAGCCACACAGGGATCCTGGAGCTCAGGCAACTCACATTAATGGTTGTGGACAACAGAAGAGCCAAGGTGGCAGGGAGGGAGACTGCACCCACGGTCCAGTGGTCGAGAATCCGCCCTCCAAAGCAGGTGACACAGGTTCCATCCCTGGTTGGGGAACAAAGATCCCACAGGCTGAGGGGCAACTAAGCCAGGGCTGGCAGTTCCGAAGACCCAGTGAAGCCAAAAGATAAAATAAATATTAAATAGGACACTTGTGCCCCAGAATACTATGCAGACCTTAAAAGGCCTGAGGTGTTAACATAATCTGATAGAAGGTGGTATTACCAAAAAAAAAGGAAAAAGAGGTAGGGACGGTGGGATTATCAGGCAGCAACAGAGACACTCAGGAGTCGCGGGGCTCTTGGAGGCATCAGCCCTGTCCTGAGGGTGCTGCTGGAGTCGCTCTGCTCTCCGCCACTCAGCTTGATGTATGTCTTACTGAAGCCAACGATCCTTGAAGACGCGATCATCGCTAAGGCTTCTTTCTGCTCCGATTATAATAGGCAAATGCTGAGGAATTTATTCCGAGCTCTCCAGCCTTCCATCTGCCTTCCTTAGGGCTTGGCAGATTGCTTTCCAGTCCGCGGGCCGCTGCAGTCCAGTGCTCGTGCAGAGTGAGGCCGGGTCCGGACCCCAGCAGAGGCGCAGGTCGCTGAGCAGCCCAGCGTCCGGGGTCTCCGACTGGAAGAGCCGGAGAAGAGCCAGCATTTCCACGGAACCGAGAGGACTGAGGTTAACGTGACGGCATCAGGCGGGTCCACAGCCCTCCCCCTGCCCCACCTGTCCAGGGCGCTGAGAGTGGGGACATGGAGGAGAGTAAGAACGAGGCCACGAATCGGGCCCACGTCCTCTTTGACCGCTTCGTGCAGGCCACCACCTGCAAGGGGACCCTCAAGGCCTTCCAAGAGCTCTGTGACCACCTGGAACTGAAGCCTAAGGACCATCGCTCCTTTTATCACAAGCTCAAGTCCAAGCTTAACTACTGGAAAGCCAAGGCCCTCTGGGCAAAGCTGGACAAGCGGGGCAGCCACAAAGACTACAAGAAGGGAAAGGTGTGCACGAACACCAAGTGTCTCATCATTGGAGCCGGCCCCTGCGGTCTCCGCACAGCCATCGATTTGTCCTTGCTGGGAGCTAAGGTGGTCGTCATTGAGAAGCGAGACGCCTTCTCCCGCAACAACGTCTTGCACCTCTGGCCGTTCACCATACATGACCTGCGAGGTCTGGGTGCCAAGAAGTTCTACGGCAAGTTCTGTGCTGGGGCCATCGACCACATCAGTATCCGTCAGCTTCAGCTAATACTTTTGAAAGTAGCCTTGATCTTAGGCATTGAGATCCACGTCAATGTGGAATTCCGAGGACTTGTGGAGCCTCCCGAGGATCAAGAAAATGAACGAATAGGTTGGCGGGCCCTGGTGCACCCCAAAACGCACCCTGTGTCAGAATATGAGTTTGAAGTGATCATCGGCGGGGATGGCCGCAGGAATACCTTGGAAGGATTTCGTCGGAAAGAATTCCGTGGCAAATTGGCCATTGCCATTACAGCAAATTTTATTAACCGAAATACAACAGCAGAAGCCAAAGTGGAAGAAATCAGTGGTGTGGCTTTTATATTCAACCAAAAATTTTTCCAGGAACTGAGGGAAGCCACAGGGATCGACCTGGAGAACATTGTCTACTACAAAGATGACACACACTACTTCGTTATGACTGCCAAGAAGCAGAGCTTACTGGACAAAGGGGTGATACTGCATGACTACGCTGACACGGAGCTCTTGCTCTCCCGGGAGAATGTGGACCAGGAGGCCCTGCTGAGCTACGCCCGGGAGGCAGCCGACTTCTCCACCCAGCAGCAGCTGCCGTCGCTGGACTTCGCCATCAACCACTACGGGCAGCCTGACGTGGCCATGTTCGACTTCACGTGCATGTATGCCTCCGAGAATGCGGCCCTGGTGCGGGAGCACAACGGGCACCAGCTGCTGGTGGCTCTGGTGGGGGACAGCCTCCTGGAGCCTTTTTGGCCAATGGGAACAGGAATAGCCCGGGGCTTTCTGGCTGCTATGGACTCAGCCTGGATGGTGCGTAGCTGGTCTCTGGGGACAAGCCCCTTGGAAGTCCTGGCAGAGAGGGAAAGCATTTATAGGTTGCTGCCTCAGACCACCCCTGAGAACGTGAGCAAGAACTTCAGCCAGTACAGCATCGACCCGGTCACCAGATACCCCAACGTGAATGTCAACTTTCTCCGGCCGAGTCAGGTGCGCCATCTGTATGATACTGGAGACACAAAAGACGTTCATTTGGAGATGGAGAACCTTGTGAATTCCCGAACCACCCCAAAGCTGGCCCGCAATGAGTCTGTGGCTCGTTCCAGCAAGCTGCTGGGTTGGTGCCAGCGGCAGACCGATGGCTATGCTGGGGTGAATGTGACGGACCTCACCATGTCGTGGAAGAGTGGCCTGGCCCTGTGTGCCATCATACACAGATACCGCCCTGACCTGATAGATTTTGACTCTTTGGATGAGCAGAATGTGGAGAAGAATAACCAGCTGGCCTTCGACATTGCTGAGAAAGAGCTGGGCATTTCTCCCATCATGACAGGCAGAGAGATGGCCTCAGTAGGGGAGCCGGACAAGCTATCCATGGTTATGTACCTGACCCAGTTCTACGAGATGTTCAAGGACTCCCTCCCCTCCCGAGACGCCTCAGACCTGAATGCGGAGGAGAGGGCTGTCCTAATAGCCAGCACCAAGTCCCCCATCTCCTTCCTGAGCAAACTCGGGCAGACTATTTCTCGGAAGCGCTCCCCCAAGGACAAGAAGGAAAAAGACTTGGATGGTGCTGGGAAGAGGAGAAAGACCAGCCAGTCAGAGGAGGAGGACACGCCCCGGGGCCACAGAGGAGCAAGGCCCACCCTGGTGAGCACGCTGACCGACCGGAGGATGGACGTGGCCCTCGGCAACCAGAACAAAGTGAAGTACATGGCAACCCAGCTGCTGGCCAAGTTTGAGGAGAACGCGCCTCCACAGTCTGTGGGTGTGAGGAGACAGGGCTCCATAAAGAAGGAGTTCCCGCAGAACTTGGGAGGCAGCGACACCTGCTATTTCTGCCAGAAGCGGGTCTATGTGATGGAGCGGCTGAGCGCCGAGGGCAAGTTCTTCCACCGGAGCTGCTTCAAGTGCGAGCACTGCGCCACCACCCTGCGCCTGTCGGCCTATGCCTACGCCCTCGAGGACGGTAAATTCTACTGCAAGCCACACTACTGTTACCGGCTGTCTGGCCCTGCACAGAGGAAGAGACCGGCAGGGGTGCCTCTGTCTGGAAAGGAGGCCCGGGGACCCCTGCAGGACAGCCCCGCCGCAGACGCCAGTGGACGGCCCAGCACCAGTGCCAGCCCTGCCGAGAGAAGCCCAGGCCCAAGCGTGAATGGCCTGGAGGAGCCGAGCGTCGCCAAGAGACTGCGGGGCACCCCGGAGAGGATCGAGCTGGAGAACTACCGGCTGTCGGTGCGGCAGGCGGAGGGGCTGGAGGAGGTGCCCGAGGAGACGCAGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGGGCACAGAGGAGGACGCGGCCAGCAGCAGTTCGGAGTCGGAGATGGAGGAAGAGGAGCCTCCGCTGCCCACCTCGGACCTGGGCGGCGTACCCTGGAAGGAGGCTGTGAGGATCCATGCGCTCCTGAGAGGGAAGAGTGAAGAGGAGCTGGAGGCCTCCAGGAGCTTCGGGGCCGGGGAGGAGGAGGAGGAAGACGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGAAGACGAGGAGGACGAGGAGGAGGACGAGGATGAGTCTAGTGAAGTCGGGAGCCCAAGGAGGCTGCAGCAGCTGCTGAACCCGGCCGACCCCCTGGAGATCCAGGCCGACGTGCACTGGACGCATATCCGTGAGAGCCAGGAGGAGCGAGCGGCACTGGCGCCCAAGTCCCCCCTTCCCGGAGTCCCATTCGATGAGGATGACCTGGAGCGAGACGTGGACTCGGAACCAGCAGAGATCAAAGGGGAGGCAGCGGAGAATGGGGACGCAGGGGACACTGGTGCCGAGCTGGACGACGATCAGCACTGGTCGGATGACGTCCCGTCCGAGGCCAACACGGAGCTGCACCTGCCGGCAGTGGGAGCAGAGCTGGAGCTGAGGGTGTCGGATGGCGAGGAGGAGCCACCGCCGGCCTCAGTAGGGCACCCAGAGAGAGGTCCCTCCCGAGTCTCCAGCCCCACCCGGTCCCCTGAGGAGCCCACGGGCCTGTCCTCCCCAGCCCGCAGCCCCGGGGCACAGAGCGCCCATCCCCCACTTGCCGCTGTGGCCACCGGGGTAAGGTCACCCGCCGAGAGCCCTCTGCCGGAGCCCTCGACCCCGCCAGCGGAGCCCGAAGCTCACCCTCCCATCCGATCGCAGCCTGAAGCCAGGACGCCACCCTCGCCTGCCAGCCCCCAGCGCCCATCCCCGCCCACCCAACTGCCCATCTGCTCCCAGCCTCAGCCGTCCCCTGAGGCCACCGTACCGTCCCCCACCCTGTCCCCCATCCGCTCCCAGCCCGTGCCGGCCAGAACCTCCACTCCTCTGGCCCCCCTCCCCGTGAAGAACCAAGGGGTCACGAAGGACACACTGGGCAGCTCCCTCCCTGGGGACGAGGCCCTGAAACGCAGCGACCTGGTGGCAGAGTTCTGGATGAAGAGTGCCGAGATCCGCCGCAGCCTGGGGCTCACGCCTGTGCACCGGAGCCCGGGGTCTGAGCTCGCCTTCCAGTCCCCGCCCCTGAAGGCCTGTCCAGCAGAGAAGGCCCCCCAGAGCGAGGGGCTCCGGCTCCTAAAACCCCCACCTGTCCCCAGGAAGCTGGGGCTGCCAGCAGCCGAGGGGGCCCAGCCCTGCCCACCCACCCCTGTGTCCCCGCCCGACAGGGAGCCAAAGGGCCCCCGGGAGGAGCACAGAGACCTGTCCAGCAGCTCGGGGCTGGGCCTGCAGGGCAGCTCCTCCCGCACCAGGACACCGGGCAGCCAGAGCTTCAACACCTCTGACTCCACCATGCTCACGCCTCCTTCCAGCCCGCCGCCCCCGCCGCCTGACGAGGAGCCCGCTACCCTTCACAGGAAGCCAGCCCTGGCAGGGCAGCTTGTGGCCTCAGCACCCCCACCCCCGGCTGTATGTGTGAGGCCCCCGCGGGAGCCCACCCAGCCCCCCCAGGAGGAGGCGCGGAAGTCTTTCGTGGAGAGCGTGGATGAGATTCCCTTTGCGGATGATGTGGAGGACACGTATGATGACAACACATGTGACGACCGCACGGAGGACTCGAGTCTGCAGGAGACCTTCTTCACACCCCCCTCCCACTGGCCCCACCCCAAGCAGCCCTTGGCTCCGGAGAACGGCCGGGGGCCAGAGAGTGCGGTCCCACTGCAGAAGCGGGGGCTGCCGCTGGTCTCGGCCGAGGCCAAGGAGCTGGCGGCCGAGCGCATGCGGGCCCGGGAGAAGTCGGTGCGGAGCCAGGCACTGAGGGACGCCATGGCCCGGCAGCTGAGCAGGATGAAGGAGATGGACATAGCAGCTGCAGCCCCCAGGACCCCCAGGACCCCTGCACCCCGCAGAGCCACTGCCGTGCCCCCCAAGGGCCCCGAGGAACCTGCCCCGAGGCACGAAGCCACAAGTGAGGAGCTGCTGTCCCCTCCCTCGGACTCAGGGGGCCCGGACGGCTCGGTCACCTCGTCAGAGGGCTCCAGTGGGAAGAGCAAGAAGAGGTCGTCCCTCTTCTCTCCTCGGAGAAGCAAGAAAGAGAAGAAGCCCAAAGGCGAGGGCCGGCCCCTGGAGAGGCCCAGCCCCGGCACTCTGGAGGAAGCGGCCGCCAAGCCCAGGTCTCTGTGGAAGTCTGTCTTCTCGGGGTACAGGAAGGACAAGAAGAAGAGTGATGGCCGGTCTTGCCCCAGCACCCCGTCCAGCGGGACCACAGTGGACGCCGGCAAGCCCAGGGCATCTCCCGTCTCAAGAGCAGAGCTGCGGACGCGGCGCCAGCTGAGCTGCTCGGAGGACTCGGACCTCTCCAGTGACGACGTCCTCGAGCGGACCTCCCAGAAGTCCAGAAAAGAGCCGAGAACTTACACGGAGGAGGAGCTGAACGCCAAGCTGACCCGGCGTGTGCAGAAGGCAGCTCGGAGGCAGGCCAAGCAGGAGGAGCTGAAACGGCTGCACCGCGCGCAGATCATCCAGCGGCAGCTGGAGCAGGTGGAGGAGAAGCAGCGGCAGCTGGAGGAGAGGGGGGTCGCCGTGGAGAAGGCGCTGCGCGGGGAAGCAGGCATGGGCAAGAAGGATGACCCCAAGCTGATGCAGGAGTGGTTCAAGCTGGTGCAGGAGAAGAACGCCATGGTGCGCTACGAGTCAGAGCTGATGATCTTTGCTCGGGAGCTGGAGCTGGAGGACCGGCAGAGCCGGCTGCAGCAGGAGCTCCGCGAGCGGATGGCGGTGGAAGACCACCTGAAGACGGAGGAGGAGCTGGCGGAGGAGAAGAGGATCCTGAACGAGATGCTGGAGGTGGTGGAGCAGAGAGACGCCCTGGTGGCCCTGCTGGAGGAGCAGCGGTTGCGGGAGAAGGAGGAGGACAAGGACCTGGAGGCCGCCATGCTGTCCAAGGGCTTCAGCCTGCACTGGTCCTGAGCCCAGCCCAGCCCTGGCCGGTCTGCGCACTGCCCAGATCCCCCTCCCAGACCCCCGGTCTGAGAGGGCCTGGGCCTCCGGGGAGTTTGCACTCAGGTCCACGTGGCTCTGAGAAGGGTTCAGGCATCCGAGCTGTGGGGAGCCCTGGGTGAAGCTGGTTGTCCAGCGGTTCAGCCTCCTTGGAGGAAGCCCTCTGCCCGCCCACTCCAGAGCGTGAGAGTGTGGGGGCGTGCCCAGGGAAGGTGCCTGGGAGGACGCAGTGACCACGCTCCCCTGGCACCACGCAGAAGTGGACGAGAAGCCCAGCCCACACCCCAGGCCTCCTGGCTGTGCCCTGCGGCTGCTGCATTTGCTTTTAATTCTCAACACTGGAAAATACTGACTTTGGGGTTGGGCGGGGCCCCAAGTTCTGGCCCCGCCAGCAGGCTGGCCTTGTCATGGACGCCTCGCGGCGGGTGGGAGGCCGTCCTCCACGCCTGGTTCCTGTGCTTGCACCAAACGAGGCTGACAGCCTGGGAGATGCAGCCTCTGGGGACCCTCTTTGTCAATTAACTTATTTTTTTATACTTGAAGCAGCTTCACTTTTGTATCTTTACTGGGACCCTGATGCCCCGGCACCCGGTTCGGGGCATGGAGCTGGGTCCCAGCTGACCGCGCTGCCCTCCATTCATCACCCCCTTCTTCCTGGGGCTGACCGGAGCCCTCCTGTCAGAGAGAACCCGTGTGGGCCCCAGTGCGCTGCTCCCATCCCCTGTGCCTGGCCCCAGGTGTCCGTGTCTGCACCGCTCACTCATCAAGGATGTACTTGAGCTGCTAGAGGCCAGGCTGCTGGCCAGGTACTGCTCAGAATCCTCCCTGTTGAAATCCCGGGTCCACAGGACCCGTGTTTCTCTCCGTTTTGGAGCCAAGGTCTCATCTCCCACATTGACTGAAGACGGTTTAGGCCACGGCACCAGCATGAGGTACCCTGCTTGGTGAGGCCCGGACCCACCAACCGGAGCTGTGGTGACAGCACGCAGACGGGACTGTGGTCGGGGAGTCACACACACACACACACACACGCGCGCGCGCGCGGCAGCTTCTGCTCAGCCCCCCGCTCACACCTCTTTGTGGGGAGGCACGGAATGAGAAGCACCATGGAGCCAGCTCGAGCTGCGGTTTGGCCAGGGGCTGACCGTGTCCAGCTCCCAGAGCCGTCAGAATCTGCAGCAGCCGTGCCCGTCTGCAGGGGAGCTCGGCCTGTCCTGAGGCCCTCCAGCCCACCTGGTGGAGCAGGACCACACGCTGGAAAGGGAAGCTGCAAAGGCAGGATGAGGGGCATCCACACCAGCCTCGGAAAGTCCTTGGGGAACCACATCGTGCCTCAACTTGAACACATTCATTCTCACTGCAAAGGAGCGGAGAACTGTCTTCTTGAGTCTGTCCCAAAGCGGTCATCCGTCACCCCCTGGAATCCAGGGGGCTTGTGGCTTGGACCCTCACTTCCTGCTTGTTGAAGCAGAGCCTCTATTTCTGTTCTCCTTTCTTAACAGGGGAGCAGAGGGTGTTCTAGATTCCATCTTTAAACCCCAGCCTTCCAATAAAGCTGGGCTTGGGACAGGATTCATCGCCTGTGTGGCCTTTGCCAGCCCTTCCCACCCACCACCCGGTGCACCATGACTGCCAGGCCTGTCCCGCAAGCCCCTGCCCACCCGGGACAAGGACGGGTTTATGAAGTAGCCAGAAGGGACGCGGCACCGCCCCGCGGAAGCGCACTGTGCCTGCCAACATGGGGAAGGCCCAGAGCTGCAGAGAAGCTCGGAAACGCTCCCCAGCTCCCTTGCGCGGTGCTGCGCCTTCAGGCTCCAGTAGAGCACTTTTCCTGAACGCTCCATTTCATAACCACTAGTGTGCAGGTTGTCACAGTGCCTGCTGACAGGCTGCTGTGGTTTCCAGCTCTGGGAACGCATGGCTCCTGTCGCGTCCCCACGTGGGCAGGGCCGCAGGAAGTCTCCCTCTGCAGCGCTGGGTGTGAGTGAGCCCATGCCAAGGCCAAGGGCCCAGCCTGCTCAGATGGCATCTTCCGGCCTTTGCCCCAGGAGCCATCCTCCAGCTGCCCTGACCAGCAATGAGAGGCTATTCCCGATCTTTCCAAAGAGCAGGATTTTTTTCAGTAGGGCAGAAAGTGGAGTTTACAGAAAACAACTGACCTACAAAGGGGAATGGGCCATTTTATGCGCAATAAAAGTTTCTAAAAGAAATG EMBV3_41167 TGGCATCTTGCTGGTGATCATCTCGTACATTGTCCCACGGGATGTGACTGTGGATCCCAA Gene GeneID:539995|TMEM74:XM_002692747:70_cdna Constitutive 0 NULL GeneID:539995 14 GENE TMEM74 NULL transmembrane protein 74 EMBV3_41719 GGTAGAAATCATCAGACGAATGCACGTCAGTCAAAACCCTCTCCATCACCTGTAGCTGGG Gene GeneID:504290|C11H2orf56:NM_001101049:50_cdna Constitutive 0 NULL GeneID:504290 11 GENE C11H2orf56 MGC137573 protein midA homolog, mitochondrial EMBV3_26791 CGTGTAAACTCACCTTCTGGAACCTCTCCTCTTGGACTTAGAGCTTACCTGTGTCACGCT Gene GeneID:616799|GINS4:NM_001082460:106_cdna Constitutive 2 NULL GeneID:616799 27 GENE GINS4 MGC148462 GINS complex subunit 4 (Sld5 homolog) EMBV3_03288 ATCAAGGACGTGAAGCTGCCAGTGCAGTTGCAAGGTCATTGCGGCTGAGGGAGAAATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28812 ACAGGATGCCTAGAAGGACTCTATTTAACTCTTGCTATTATGACCTGGGGACAGCCTCCC Gene GeneID:282091|PPP1R16B:NM_174824:742_cdna UTR3_Alt 2 NULL GeneID:282091 13 GENE PPP1R16B TIMAP protein phosphatase 1, regulatory (inhibitor) subunit 16B EMBV3_20016 CTGGTTGTCATCCTGCGGGGCCCTATAGCCACTGTACCCATTGTTTTTCTCCTGAAGACT Gene GeneID:617886|LOC617886:XM_002707695:54_cdna Constitutive 0 NULL GeneID:617886 15 GENE LOC617886 NULL similar to olfactory receptor, family 51, subfamily M, member 1 (predicted) EMBV3_15120 TTCAGCTGGAGGGCACAGTGCTGAGGAAAGCAGTGAAACCTGATGAATTAAGCAGTGTCC Gene BVV0102_066639 + 0 NULL GK000019.2:35432082-35473575 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099792 1 XLOC_060035 NonCoding TCONS_00099792 XLOC_060035 NonCoding NonCoding - 19:35465422-35465649 - TSS74168 227 1 0 0.000599370410947285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.31800140220526e-05 0.000126721268421915 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0257301480912874 0.813873435374444 -0.000232852590458354 0.995979735007937 CCACGGCTGTAAAAATAGAGCTGCACAGACGCAGACGAGGCTAAGCCGGGAGCCAGCCTGAATATTCAGCTGGAGGGCACAGTGCTGAGGAAAGCAGTGAAACCTGATGAATTAAGCAGTGTCCCCAAGCTGGGCTGGCTGCCCGTTTCCACTTCCTATGGCCTGGGAGCCAGGGCAGGGGAACCCCTGATGGAAAGGAAATACACTTGGTTTCTGGGTTCCAAGCT TCONS_00096526 . 3' 5076 TCONS_00096526 . 3' 5302 EMBV3_06692 AGTGAGCCGAACTGTGACCCAGAAGTTTGGGGGCGTGATTGAACTTCGCATGGCCGTCAA Gene GeneID:613376|RPIA:NM_001035433:137_cdna Constitutive 0 NULL GeneID:613376 11 GENE RPIA MGC127056 ribose 5-phosphate isomerase A EMBV3_06305 CCCGCCCTCCAAGTCCAACCTCCGATCTACTCTGGCGCTGAAATGGATTAATAAGGAACT Gene GeneID:100297179|LOC100297179:XM_002707844:1413_cdna Constitutive 0 NULL GeneID:100297179 13 GENE LOC100297179 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_11009 GTGCCTGATGAACTATGATCGGAGGTTCGTGACATTGTATAGGAGACAGGGATCAAGACC Gene GeneID:506980|PGM2:XM_002688226:138_cdna Constitutive 0 NULL GeneID:506980 6 GENE PGM2 NULL phosphoglucomutase 2 EMBV3_05189 AATTAGGAGCACAAATCCACAACACATGAAGAACGACCAAACGCAGGGTGAAGCGTGGGG Gene BVT0102_121897 + 0 NULL GK000014.2:83456675-83551315 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14297 TGGGGGCATTGGGTTAATGGACTTACTTGCCTAGGTACAAGCAGGACTTTGGGACATATC Gene BVT0102_140366 + 0 NULL GK000019.2:21152190-21159781 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095664 TCONS_00095666 TCONS_00095665 TCONS_00095667 1 XLOC_057766 Coding TCONS_00095667 XLOC_057766 Coding Coding NUFIP2 19:21152801-21181951 j TSS71254 10599 1 TCONS_00095667_5 697 5 0.636557000240145 0.00108746933825689 0.00167977326954049 0.0010478431173407 7.25612154159995e-05 0.0016777554674389 2.16843739615299e-08 0.000846493291994999 3.07578489468395e-05 0.00151961929142529 3.06139717732149e-06 6.06680458866431e-09 2.05272346882856e-09 0.000223992474030498 4.22399909607902e-09 0.00047265029555036 0.00532916674042406 0.00153268716170671 0.00151292264074617 0.000952124815163675 0.000548048798696673 0.000120157556358136 0.00154121595961848 0.00044799500616189 0.00310154808371409 0.000511036399516926 5.32627179896455e-14 2.64686157056447e-07 3.17585315282415e-07 7.3649423659198e-09 0.000595382867273562 XM_002695672.3 NUFIP2 PREDICTED: Bos taurus nuclear fragile X mental retardation protein interacting protein 2 (NUFIP2), transcript variant 1, mRNA. 0.0 9892 100.00 0.517407302575715 NM_020772.2 NUFIP2 Homo sapiens nuclear fragile X mental retardation protein interacting protein 2 (NUFIP2), mRNA. 0.0 8843 87.18 0.676667610151901 TCONS_00095667_5 sp|Q7Z417|NUFP2_HUMAN NUFP2_HUMAN Nuclear fragile X mental retardation-interacting protein 2; 0.0 1230 95.12 0.998565279770445 1 coding 0 0 0 0 -1.20382696781614 0.0186377012546712 0.12007004568779 0.161095317152407 GCCTCCCAGAGCCAGCGGAATCGCCAGTGGAATCTGCTACCCTCGACATGAGCTAGCTTGCTGGCGAGGAGTGTAGAAAGTGCTGTTCGCAGACTGCGCGGTGAAGGAGAGAAAGCGACACAAGAGAGAGCCATAGTGCTGACGTTGAAGGCCCGGCCCTGTGAGGTTGCATAGGGTAAGTGGCGTTGGCCAGGAGGCTGTGGCGAAGGGGGAAGGAAAGAGGATTTGGGCTAGGGGCGGGGCCAGAGGCGCAGCGTTGCTCCTGATTGCTGGGATGCAGCTGCCAATCTCGCAGAATCGCTCTGTTAACCAGTGCGCTGGCGAGACGCGCTCAGATATACTGAGTGAGCCCTGAGAAGCAGTCTCAGATCCTGACGGTGCAGCAGCCCGCAGCCTCAGCCAGAGAGTCCCAGCCGCTTTCAATGGAGGAGAAGCCCGGCCAGCCACAGTCTCAGCACCATCACAGCCACCACCATCCGCACCATCACCCCCAGCAGCAGCAGCAGCAGCAGCAGCCGCACCACCATCACCATTATTATTTCTACAACCACAGCCACAACCACCATCACCACCACCATCACCAGCAGCCTCACCAATACCTGCAGCATGGAGCCGAGGGCAGCCCCAAGGCCCAGCCAAAGCCGCTGAAACATGAGCAGAAACACGCCCTCCAGCAGCACCAGGAAACGCCGAAGAAGAAAACAGGCTACGGTGAACTAAATGGTAATGCTGGAGAAAGAGAAATATCTTTAAAGAGCCTGGGTTCTGAGGAAGCTACCAACCCTATTTCCAGGGTCCTCAATGGCAACCAACAAGTTGTAGACACTAATCTGAAGCAGACTGTAAAGTCCAGCACCTTTGGGAAAGCAGGAATTAAAACCAGGAATTTTATTCAGAAAAACAGTATGGACAAAAAGAATGGGAAGTCTTATGAAAATAAATCTGGAGAGAACCAATCTATAGACAAGACTGATACTGTAGCAATTCCAAATGGTGTTGTAACAAATAATTCTGGCTATATTACTAATGGTTATATGGGCAAAGGAGCAGATAATGATGGTAGTGGATCTGAGAGCGGATATACCACTCCTAAAAAAAGGAAAGCTAGGCGCAATAGTGCCAAGGGTTGTGAAAACCTTAATTTAGTGCAGGACAAAATAATGCAACAAGAGACCAATGTCCCAACCTTAAAACAGGGACTTGAAACTTTCAAGCCTGACTACAGTGAACAAAAGGGAAATCGAGTAGATGGTTCAAAGCCTATTTGGAAATATGAAACTGGGCCTGGAGGAACAAGTCGAGGAAAACCTGCTGTGGGTGATATGCTGCGGAAAAGCTCTGATATTAAGCCTGGTGTGAGCAGCAAAAAGTTTGATGATCGGCCCAAAGGAAAGCATACTTCTGCTGTTGCCTCCAAAGAGGACTCGTGGACCCTGTTTAAGCCACCCCCAGTTTTTCCAGTGGACAATAGCAGTGCTAAAATCGTTCCTAAAATAAGTTATGCAAGCAAAGTTAAGGAAAACCTCAACAAAACTGTACAGAACTCTTCTGTGTCACCATCTTCATCTTCATCTTCCTCATCATCTACTGGGGAAACTCAGACCCAAGCTTCAAGTCGATTATCCCAGGTCCCTATGTCAGCGCTGAAATCTGTTACTTCGGCCAGCTTTTCTAATGGGCCAGTTTTAGCAGGGACTGATGCAAGTGTGTATTCTCCAGGGGGTCAGCCACTGCTAACTACTGCTGCTAATACTCTAACACCCATCTCTTCTGGGACTGATTCAGTTCTCCAGGACATGAGTCTGACTTCAGCAGCTGTTGAACAAATTAAGTCCAGCCTTTTTATCTACCCTTCAAATATGCAAACTGTGCTGTTGAGCACAGCTCAAGTGGATCTACCCTCTCAGACAGATCAGCAAAACCTGGGGGATATCTTCCAGAATCAGTGGGGTTTATCATTTATCAATGAACCCAGTGCTGGCCCTGAAACTGTTACTGGGAAGTCATCAGATCATAAAGTGATGGAGGTGACATTTCAAGGGGAATATCCTGCCACTTTGGTTTCACAGGGTGCTGAAATAATCCCCTCAGGAACTGAGCATCCTGTGTTTCCCAAGGCATATGAGCTGGAAAAACGGACTAGTCCTCAAGTTCTGGGTAGCATTCTAAAATCTGGGACTACTAATGAGAGTGGAGCCTTATCCTTGGAACCCAGTCATATAGGTGACCTGCAAAAAGCAGACACCAGTAGTCAAGGTGCTTTAGTGTTTCTCTCAAAGGACTATGAGGTAGAAAATCAAAATCCTCTGGCGTCTCCTACGAACACTTTGTTAGGCTCCGCCAAAGAACAGAGATACCAGAGAGGCCTAGAAAGGAATGATAGCTGGGGTTCTTTTGACCTGAGGGCTGCTATTGTATATCACACTAAAGAAATGGAATCTGTTTGGAATTTGCAGAAGCAAGATCCCAAAAGGATAATCACTTACAATGAAGCCATGGATAGTCCAGATCAATGAAGGACCAGACTGCCTATTTGTAACCTTTCTGCAGCATTAGAGCCACCGTTCATGGGGGACACAAGGCTTTTATGCTCCTAGATCTTCAACGCAGCAGAGGAACCATAAGTAGAATCACAGGATAATATATACAAATATATATATATATACATTATATATATATAGTTATTTAAAAAAAGGCAACTGAAAGTAATTAGACTTCTTAAGGAAACAAATTTATTTCAAGAGACTACACATGGTTATTTAATCTCCGGTACTGAATAGTTTTGTTTTGTTTTGTTTTTAGTTTTTGTTTTTAAGTGTGAATGCAAGTGATTAATGAATATGGACTTATTAACAAGCGTGGTTCTAAAGTTCCTGCTGTCATCACCTTGGGCAACAAATGACCCACTGGAAAGGCAAATCCACTTTAAAAGATCTCTGTATCTTGTTCTGTGACTAAAGTGATACACTAATCACGGGGAACCCAGAATGATTCAACATTTTCCCCCACTCCTCCCTTGATCTTTTGGTTATACTTTGAACCCTGCGAGAATGCTGGATAAAATGCCTTGAAGTTTGCAGGGGTCTTTTTTTTTTTTTTTTTTTTAGTGAATATGATTTGCATGTCTTGCCAGGAATAAGCAGCCTCTGTGGGGTGTTGGGAAATATTTTCTTTGTTTTCTTTTATTTTTTGTGGGGTGGGGGGATAGGGGAGGGCATTGAAGTTCTACAGTTCTGAAGTAGTTGGTGGTACATAGTTTCACTTGGCTTTGGTTACCTATTGGACTTTAATAAGTAAAAACTTTATGAGTGTCATTTAAACAAAAGTTACAGAACAAACAATTGGCTTTAGATATTTAATCTGGAAAAATCCTCCTGTGCCCATGTTCTAACGTAACTGTGTAAGTGGGAGCAAAAATGTATTCTGCTTTTCAACTGTAGGTGCTCCAGACTTGCTCTCTGTCACTAACACTAAATGTGCTATTTTTCTTGTTTTTCATCAAACATCTGAAGAGAAACTTCTGTACCTTTCTGTAAATTCTTTTTAATTTCTCAGAAATCTAAAAGGGGAAGAAAAAAGTCCATGAAAACTAAAACTTCATGTTTTTAGCCAGTGAGGAGGTAATAAACCCTGCCTATAGAAGGTGTGTTTTCATGCAAACTATACTTCTGAGCTTATTAGCTTCTAATTATATCTTAATAAATATATTTTATTACTAGAGCAAATGGGTTTTTTTTAAGGAAAATAATGTGAAATTCTGGAAATTTTCTTTTGGGCAGAGAAGAGCATCAGCCCTGTCTTATCACATTACCATCCTGTTGCACTGCAGCTTGTATATAGCATGCTAAAATAAATTTTTTTGTGTGTGCAGAAACTAAGGGTCCAATATAAGGTTGGGTGATGTCAGTGGCATAAAAACAAGTTCTCTGGCCTGACATAGCATCGCGTCTCACACACACACAAACACAGAAATTAGTATATCCATGTATGTCAAATACAGGTTAAAATAGCAGGGTATTTATACAGAGAGATGTAGTCTTCTAATAAAAGTAGACTGGATCCCCAGGGTTATTTGGGGAGGAAGTAGCTACTTTTTGCTCAGCCCTTTTGCTTAAGAAATGTCCAGTTTTGAGCGACTGTAGTATGGATGAGTTTTCATGTTTTGTTTGATTATTTGAGGCTTTTAACAAGTAGTTTGTGAAAGAAGCTGTTGGACTCAGCATAGAGTAGAGAAAATATCTTTATAGTCTGGATTTCTGCCCTGCTTAGATTTTAAAAGTATAAGCATGGATTGCCAATTCCACTTGATGTAAACAAAACTTTTATACATAATATATATATATATAAGATAACTTATTGTATCAGTCCAGGTTCAGAAACTTGTGGTAGGCCAGTTCCAGATAGTTTCATTTCACCTGTAAACTGTATCACTTTTACGGATATTGTAATTTTCAAATGTATAATATGTTTACAGATGTGCCCTGCATTTAGTCTGCCTTGTTCTATTTTGATTTTTGTTGAGTCTCCTGCCTGCTTGCCAAAAGCTAGGATGCTTCAGGCCCATGTACAATTGAAAGCAGAGGCATCCTTGAGCTTTAAAGCATTGAACAAACTGGAAAATGCATCATACCACATAACTGAAGTGAAAGAAGTCTGTGTTTTGTGTTTTTTTTTTTTTTTTTTTTAATAAAAATTTTCAAAAGGTTAAAAAAAAAAGATACAAGGTTGATTAAAGAAAAAAAAAAAAGGCTCCAGTTTGTTTTACAGGTTTTAAAGTTCTGCTGTGTGTTCAATTGCCTTGTGTAACCACTTGTCGCCTTAGGGCCAGATTCTCTCCCTCTCTTCTCGTCCTCATTCCCCGCCGCCCCCCACCCCTTTTTTTAAAACATCCATTTTGCTTGCCTGGTATTTGAAAGCTCTTCTGTCTCACAACTCACAAGAAACTTTCTGGGTTTGTGGTATACAGAGGTTGAACGAATATATATTTTGAAAGGAATTAGAAAAACAGCCCTCATCTGAATTTTTAATTTAGAAGCAATGTTTATCTTCAAAATATCTTTGACAAGCTGTTGTTGCTTTCCTACTTCCCTTCCGTATCCCTCAGGCCTCTCTGTTTAGAGAAGCCAAAAAGAGAATGTCTCCCTTGTCTGTTTGTCCAAAGGTTTTTGAGTCTCCCTTCTAAATGAAACAACGCAACATTTCACTTTGATTTCCCCCACTGAAATTTCCTTCACTATATGGTTAGAGGTATAGAGTTAGGGATGTCTCTTTACCTTCTGGAACCCTAGTGCCCCATCATATTAACTGTCAGTATTTTGGGGGCATTGGGTTAATGGACTTACTTGCCTAGGTACAAGCAGGACTTTGGGATATATCTCCTTTGTGCTGTTTGGTAACACTTAACTCTACTTGTCGCAATCTTTCTTCTTAGGTCCTCACACAATTCCTTACAGAGCACTTATTAAAAAAAAAATCTTAAAGAGTTGATCTGTTTCCTGATTATTTTATGTAAGCTTCTAAACTTCAGCTGTGATTAATTTAGCACATTTAAATAACGTTGATGTGTTATTGTTCGGTATAAAGAATTTTTCTTCAACTCAGAGTATTAGTACTGTAGCATAAACCAAATACAGTCTAGAGGGGATTTTTAACATCCCTCCATTATAAAGACTGAAAAGGTGTGTGTCTGTGTGTTTGTTGAGTGCTTGTGTGTGTGTGAGAGAAGGAAATATTAAAAATTAGTAAGTGAATGTGTGTAAGACATTATATTAGTATTCAGAGAATGAACTTGTATTTATTTTGTGCCATTTGTTTTCATTACACAGAATAAAGTCAGGTGGTTTTAATCCTTAAAAGGGTAGTATTTGAAAAATGGCACTAAGAATGAAATCATGACCTATTTTTTTAATAGCTATGAAGATACTAATTATGGGTGAAGATTTCTTTTTAAATCTGCCTTGATTGTAGGTGTCTGCGTCACATACCACTCTCGTAGATGTCTTGAATAATTCCCCTTCCCCTCAAAAGACAGGGTGTATTTATCTTTCTCTTCGTTCACCCCACTTTAATGAACTGAAGTTAATTCCATAGCCTTTACTCTGACTTTAGTAATGAGCTTTCACATACAGTGTATTTACAGCATCTATAGTTAGCACTTCCTCCTCTACTTTCTAGGAGGGGATAGACAATAACTAGGAATTTGTTAATGCCAGTTTGTTTTTTCTTGAAATAAATGGCTGGAGAGTTTTAGAATTTTGCTGTTTTCCTTAATCATCTGCTTTCCTAATCACAGAATCTTGGCAAAAACTTTATAAAGGAAAAAAAAGTGCTGCATTGTTTTTTCAAATAACAGTTTCTAGGGGAAATACAGCAAACCTCAATTATGAGTGTTGTCCACAAGACAAAATGTGTTTCTTCAACAAAACATTACATAGCAGCAGTAGTTTCGTGCTTGGTTGTTAGGCTTGTTGCTAACCCAACTGAAGGCATCTAATGGTTTATTTTATGCTGTAAACTTTTTAAAATACAAAAAAGCCATTTAGTGTGAAATTTGTGATGTACCAAATGGCCACAGTCAAGGAAATTGGGAAGAGAACATTGTTTGATTTTAAACTCCTCTAAGGAGGAAGTCATCGTTTCAAGACTTTCTTCCTCAAGTTCTAGAAATAGATTAAAAGTCCACAGTTTCCAAGGATTATGAGTATAGTTCTATCGCTGGGCCATATTCTCAAATAACACATGATCCCTCTTGTGTACCTGTGCTAACTGTGTACAACAGACTACAGTGGAACAAATACATGTTATGATCAGGTTCGTTAATGCTGCAGCAGTTGTAGATTCTGATCACGCAGTGTCTTTCAGTAGTCCTACCCATAATTTTACTGTTGAATTTTTAAAAGGGTAGAATTTGCTCATCTTCCCCCCCACCCAAAGTGTTAACTTGTTTAAGGGGAGGGGCCAGAGGATAAGACTAGGAGAAAAGCTGCTTTATGTTTGCAGAGACGCATTAGGTTATTAGTTCTTAATAAAGATGTTACTTTCATTAACTAATTGACAGAGCACCAGGATTCTTTTATAGTGAGAAAGTTGGGCTTCTGCTTCTAATTATCTTAAAATGTTTTTTTAAAATATATACATCAATCTGTTCAGATGTGTGAGAACAAGGACCACCATGGGTTGGTTTAAAGAAGGATGAGTCAGTCATTGGCTTCATTCAAAAGCAAAATTCACATCACTCAAGTTAACTGGGTTTTAATTAAATTCCACACCATTCTGCTACTCAAGAAGGAGCTTACAAATAGAAGTTTTAAATTGTCTGCACAACAAAAACACCCAGTGAAGTATGAATGGTATGTTGCTTTTGCATTACTGGGAGAGTCAAATAGCAATTCCGGGCTAGAAATGTATGAAACAGCCGTCCCTCACAAATGGGATTGCTGATTCGTACTTCCCTATCAAGTTTTATGTCCAGAGTTCTAAAGCCATTTTATAATACCGCAGTATCCCTTTTCTACAGCCTTATTAAAATAGCTGCAAACATTTATTTTCCAATCCAGTTTCACTTTGATTGCACATTGAAATTTTATTCTAAAGACCAACAAACCAACTTGAGGTAAATTATAGCTTTCCATATGTCCTCTCCTCAGGTGCTAAACTAGGCTCCAAAAATGGATTCTGCTTTAGTAATGTCTGCTTTATCCTTAAATATTACTTTTGCTAGGTGTAAAGATTTGGTGTTAACAAAAGTGGTTTTAATATGTAAATATGAATGAATGCCTTTAGTTTGCCCCTGTTTGTCTTATTAATCTGTTTCATTTATCCTCCATGGAGGAAAATCCTTTCATGATACTGAATACATTTCATTAGGTATTGTTGCATTTTAGGATGAAAATACAACTATTTTCTGTCTTGGAATAATCCTGCTGCTGCTATGAGAAACTGAAAAATCAAGAATGTGATGCACTTTTTACGTGACTATATACCATACCTTTATAGGTTGCTTTGATTACCTTTCCTGTAGCACAGCCACTAGCAAAAGTGATTGGATTTTAAAATTCCCTTTGGGAGATCCGTACAAAAAGTTTTTTATGGTATTGCCCTGTGAAGGATATTAACTTAGGAAAATACAAATTCTGTTAGTATTACACATTTTGGCCTTAAAATGTCTTCTACTACTGAAAATCTTTTAATTTTGCTTCTATTATTCCCTCTGCCTCAAAAAGAGAAGTTGGGAAGAATGGCTTAAAGGAAATAGTAGTACTGGTTTGTTGCTGATATTTTAGAAAGAAATCAATTGTCTACTATATATACTGGGGAGTTTGTTTGTATACAAAGGAGAAGTAACATTGCCCCAAGCCAATCTGATTTAGTTTAGTCAAATCAAAACCAACTATTCTGCTTCTCTAGGTATTTTTACTTAGCGAAGATAAACTTACGCTACTTGACATGAGGAAAAGTCATTTCTCAAGCACATACTTGAAGGAGATTGAACCCAATTATGATGGAAGAAAAACACCAAATGGGGTGGAGGAATATGAGAAAGATACGTGGTCCAAAGCTATCTGATTATATTTTGATGTTGCCAATATTGCAAAGCCAAAATTTTAATTTGCTTATTTAATATATTTGTTGGCCAGAGATCTATTTTTATATCAATGTGCCTTGCATGTATATTTTAAAAAAACAATAAAATTGGAAAGGCCATGTTACAATGCCTGAGATAGTTGATGGTTCTTAACCACCTCACTAATTTTTATGCAGTATGAGATGTTCATTCTATTGCCCAACTGGTGCTCTCTGTTTCAAGTTATAGATCTTGTCACAAACTGGAACTGTTTTATAAACTGGTGATTTAAGTTACTGTTTTGGTTGTTCCTTTTTCTTTTTTCGTTTTGTTCTTAGTCTGTTAGTGGCTGTTCTGTAGTGGGAAATAGTAAAAAGATTCTTCCCTTCCCTCCCCGCTCAGCACCTTCTTCAAGTAATGTGATGACACCACTTGTGTGCTTTGAAAAAAGTTTCAGCTTGCTGTTTCCTTTAGTGTTATAAAGTGTTATAAAAAGCATTGTTTGCAAAATCTAGGGAGATGAGTCCACTTTAATTTGGAATTCTTTGTGAGCTATGATCCAAGTTATTGGCTCTTCCCAACTTAAAAATTTTTTATTGTTAAAGCACCTTGCTTAGAAAATTTTAAATATTTATGTCTGCAACAATTGTCTCAAAATAATGAACTGTGCAATTCTTGTCATTAAAAAAAAGAAAAGATCTGAACTCTCCCTACTGTGGCTTGTTAGTTTCTCTGTATTTTCTGCCAGTGTAAATGTGAAAAGCTTTGCTTGCATTACGTTTTAGAAATGCATTTTGCACACTCGAATTTTGCTGAAGCTCCATGAAAAGGTTAGATCTAAGTAGATGAATAAAGCTATGCACATGTTTTGAAAGTTTAATTTGTGTGTCATTACCAAAAGTGACCTATCCTTATTATTTTGCTGCTCTTAGCTTTACCATCTGTAGAAACATGGCTCAAAGTTAGAGTTCTGGGCTAGTTCATCATTGGAACTAGAAGAGAAAAATTGGCACCTATTTTAATAACATAGTTTTAAAATGAGAGCTTGACTCGTGTCTGCTAAAGGGCTTTTTTTTTTTTTTTTTTTTAAACAGGGCAGTTTTATCAGCTTTACAAACTGTTGAATACTCCAATGAAATTTTGGTTTATTTGATCAAATAGAAATGAAAAGTGGTTGAAACTGAAATGAAGGAAGGACCTTTACCACATGGAGTTTTGTGACAATTTTATGTGTTAAACCTGGTTTAAAGATATAAAAGAAATATTTCCGTTTTATGTTTTTCCTATGTATAGAAGAGGATTACCTTCTCTATCATCAAATGTGCTCTTAATGTATGTTGTTGACTGAAAACACAGCAAGCCCGCCCTTCTGTGTCTTCCCTGGAAGTGACAGTTAAAAATGAAGTCTACTAGTCAGAATGCAAAAGGTGGCCCTTAATGCATGGCCTTAAAAGGCATGAATGCAGGAGTATAGCATCATCTTTGATGGTTATGGCTACTCCTCAGCATCTGTCAGGAGTTCACATGTTCAGTCTTGGAATGTATTGGAGGAGCGAAGTAATTTCTGTGTCTTGTGTGCGTTAGCACTTAGGAGCTGTTACCTCTTAATCTGGGGGAAGGGACAATTAGTGGGCTATAATTATGTGAGAGGATTTTTCCCTTCTGTCTCCCAATTTAAAAAATGTCCTTTCAGTGTTTGTTTTGCCCAGTCAAAAAGATAGGCCTTTTCTAGATATAAGAGCAGTGGCCAGAGATTTCCTCTTTTGCTAAATGCTTAGGTATTTGCCATAGCTGTTTTTGATGTCATGGATTCTGAGGAAGTGTCAGTTACGTGATGATCTTCCTTTATTGATGTCTTACTTCATGTTCAGTGTTTCAAAAATATAAATTACAAGCACTCTACATCCATACCCAGATTGACTTATTTTATCAGAAAAAAAAAAAAACTTGAGAAATTTGTAGATCAAATTAAGAGACAATAAGTGTACATTGTTGAATAAAAAATTTTAAAGTTTCCAAGGTGTTTGTGTTATCAT EMBV3_32528 GGTAGTTTACTTTAAAAAGTATTTCTTGTCAACATGTCTTAATGTGGCACCCAAAGGGGT Gene GeneID:505213|HSDL1:NM_001098871:11_cdna Constitutive 3 NULL GeneID:505213 18 GENE HSDL1 MGC152451 hydroxysteroid dehydrogenase like 1 EMBV3_35072 TGCGGCAACTGGGAATCTGAATGCCTATCTCCTACAGGGATGCAAGCTGTCTTCAAGTGA Gene GeneID:767849|CTPS2:NM_001076966:41_cdna Constitutive 1 NULL GeneID:767849 X GENE CTPS2 MGC137978 CTP synthase II EMBV3_14166 AGGTGTGTCACACACTCCCACAAGGTGCAGTCGCCCCTCACCAGGACGCCTCCTTCCTGT Variant GeneID:540828|PHYHD1:NM_001076243:184_cdna 443^527 1 EMBV3_11147 GeneID:540828 11 GENE PHYHD1 MGC152146 phytanoyl-CoA dioxygenase domain containing 1 EMBV3_13742 ACGGCACTGCTGGAGGCGAACTCCACGCCGGTGCGTGTCTACAGCCCGTACCAGGACTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29374 TCAGGAGCCAGGCATTCTCACGGTCACTCGCTAACTTGTTTGCCTTCTGTTTCACCCAAG Gene GeneID:100295509|LOC100295509:XM_002683682:9_cdna Constitutive 0 NULL GeneID:100295509 8 GENE LOC100295509 NULL hypothetical protein LOC100295509 EMBV3_43537 ATCTCTTTTATATGTAGCAGCGTCTGTGCATCAGGCCCGTCTCCCAGTTTCTCTCGTCCC Gene BVV0102_029097 - 1 EMBV3_36149 GK000010.2:101070358-101186185 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07320 CTTCCACTGAGGGGCCCACCCTCACGGCAGCACCTGAGACATCATTTCTTGTGCAAAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28344 TTCCAATCAAGTGGACAGCTCCTGAGGCTGCACTGTATGGTCGATTTACAATCAAGTCTG Gene GeneID:507632|YES1:NM_001101060:59_cdna UTR3_Alt 2 NULL GeneID:507632 24 GENE YES1 NULL v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 EMBV3_30228 TGTGTGCTATTGAGCCGCCGAGAGAGTGCAGCGGCAGAGAGAACGGGATACTGAGAACTT Gene BVV0102_413276 + 1 EMBV3_10534 GK000011.2:1943564-1953346 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023709 1 XLOC_014342 Coding TCONS_00023709 XLOC_014342 Coding Coding ZNF2 11:1948581-1959336 j TSS17576 2823 1 TCONS_00023709_2 425 0.133545873184555 5 0.737957969127766 0.000736541812396942 0.000425651280888796 0.000178824823980379 0.000613205627166611 0.000404332865775498 0.000697312124496571 0.000716616487494697 0.000135793573115288 0.000830954929865166 1.10679914220188e-13 1.27690479450558e-11 6.81846893089646e-23 1.43300234019508e-11 2.2869100039691e-05 2.33155078709794e-11 1.32686128900606e-11 0 1.34253707998128e-10 0.00129323628944253 0.000315653880604189 0.000425763958455288 3.93596606090835e-11 5.00562772543663e-11 8.43433335767337e-11 0.00147714043940566 0.000475536927673212 0.000156516936137707 6.24475494213715e-11 1.56094403200581e-08 2.97720181865989e-11 NM_001046446.2 ZNF2 Bos taurus zinc finger protein 2 (ZNF2), mRNA. 0.0 3916 99.82 0.772228126106978 NM_021088.3 ZNF2 Homo sapiens zinc finger protein 2 (ZNF2), transcript variant 1, 0.0 2161 77.61 0.975912150194828 TCONS_00023709_2 sp|Q29RZ4|ZNF2_BOVIN ZNF2_BOVIN Zinc finger protein 2; 0.0 875 99.76 0.997647058823529 9 coding 0 0 0 0 -0.00691660913384087 0.963000182344021 0.0233128677595563 0.644824954643503 GGTGTGTGCTATTGAGCCGCCGAGAGAGTGCAGCGGCAGAGAGAACGGGATACTGAGAACTTGGGAAAGGACTCGGCTCTTCTCTGCAAGGAGAGCACCCTGGAGGGAATGGCTGCTGTGTCTCCAACCAGATGCCAGGACCCAGTGACATTCGAGGATGTGGCCGTAGTTTTCACAGATGAAGAGTGGAGGCGTCTGGTCCCTACTCAGAGGGACCTCTACAAGGAGGTGATGCTGGAGAACTACAAGAGCATCGTCTCATTGGGACTTCCAGTACCCGGACCTGATGTGATTTTTCAGTTGAAGAGAGGGGACGAGCCTTGGCTAGTGGAGTTTCATGGATTTGAGGGGAAAGAAGGTGCAGAGAATGTCTCTCTAGATTGGGAGACTAAGCCTGAGATTCAAGGTGCTTCAGAAGAAGAAAAATCAGAAGGATCATTGAAGGAAAATCTTGGAAGAAAAGGTCCTCCATCTCCTAAAGTTGAAGTTTATGTACTGGATGGCAGGTTGGGAACAGAGAAGGAAAGCCTTACAGTTGAGGCCTGCAAGAAACCCCCTTCTCTGGAGGAAAGCTTGCGGCACAGGGCAACGCCTCCCAAGAAATTTCTCACTAAAGAGAGAGACCAGGAATGCAGTAACTGTGGGAAGACCTTTTTTGACCACTCCTCCCTCATCCGTCATCAGAGAACTCACACTGGTGAGAAGCCCTATGACTGTCCCGAATGTGGGAAAGCCTTCAGCCACAGGAGCAGTCTCAGCAGACACCTGATGTCACACACAGGAGAGAGCCCCTATGAGTGCAACGCCTGTGGGAAAGCTTTCTTCGACCGTTCGTCTCTGACTGTACATCAGCGAATTCATACTGGAGAGAAACCCTTCAAGTGCAGCGAGTGTGGAAAAGCCTTCTTTGACCGCTCGTCCCTTACCCGCCACCAGAGAATCCATACTGGAGAAAGTCCTTATGAATGTAACCAGTGCGGGAAAGCCTTTAGCCAGAAAAGTATTCTTACGCGACACCAGCTAATCCACACAGGCCGGAAGCCATATGAATGTAATGAGTGTGGGAAAGCCTTCTATGGGGTCTCGTCACTGAACAGACATCAGAAAGCCCATGCTGGAGAACCTCGCTACCAGTGCAGCGAGTGTGGGAAGGCTTTCTTTGACCGCTCCTCCCTGACTCAGCACCAGAAGATTCACACTGGAGACAAGCCATACGAATGCAGCGAATGTGGGAAAGCCTTCAGCCAGAGGTGCCGGCTCACACGACACCAGAGAGTTCACACAGGAGAGAAGCCGTTTGAATGCAGCGTGTGTGGCAAAGTCTTCAGTTCTAAATCATCAGTTATTCAGCATCAACGGCGTTACGCCAAACAGGGAATAGACTGAGTTGGGTGAAAGCTTTAGTCCAAGGATCTCCACGAAAACTCAAGATAGGTCTTCCCCCTCTTAAATCCATCACCTGGTCATCACACCTATGCTGGCTACCCCTCTCCTTTTTCTGCCTCTCTGCACCCACAGTGTTTGAAGAAACACTGTCCACCCACTGTGTTACAGAGCTGATGTGGGATGCCAGAAATTAGGATGTGACTTTAAAGAGTCAGCATTCTGAAGACATTTGTCAGACACTAGGGACAAAGGTTAGGAGGCAGTCCTCAGACAAACCTCTTGTCCGAAGCCCCAGGCATCACTGCACTTTATATAACTGGAGGCCACAGCTGGACAGGAAAAGCACCCTTTATGTCAGGGCAGCACTGTTGTTTCCAGAAGTTCTTTTTTTATAGCCGTTAGTCCCTCTCTCTTGGAGGACTTTGTGCACTGACCTTGTCCTGTTGTGTCCCAGCATCTAGATCTCTTAATACCACTACTAGTAGCCAGCACTTATTGAGCGCTTATTATGGATTAAGCACTCAGCTGAGAGTTTTGCAAGAAGGAAATTATTTGGTCCTTTCAACAACCCTCTGAAGTAGGTACTGTTATTCCCCACAATTTACAGATGAGCAAACTGAAGTTTACAGAGATTAAATAACTTGTCCAACATAATGGCTAGTACAAGGAAAGTCAGGTCTTGAATACAGGTCTTCCTTCAAAATCTCTTTACCATAAGGCTATAAGGTTTGCTTTATAATTTATGTATGTGTATTATCTCCTCAACTAGATTGTAAGCAGAGACATGACTTATATGTCTTTGTATCTCACACAGTGCCTTGCAAATAATAGGTGCTCAATAAATATTTATCTGAATTAATAACTTTTTGACTACCAAGTTCTATTTAAAACACCTCTTAGAGTCACAGCCTTTCTCTGAATTTCAGTCTCACCTGTACTTTTGTCATCTTGGGCTTCTATTACTGTAGTAGTCACTCCCTGATCTGAATTATTTCCTCCTCTTTATTGAGGAGGGGGATATCCAGCTATGGCCCAATAACAGGCAAACCCCAAATAAACAAAGATTCATTTCTCACATAAAATCGGATGTGAGTCAGTCCTCCTCACCCTCATCATTTAGAATATGTTGCCTCCAATGTCATCATGGGGGGTATTCTGGGATACTTTTAATGGCCATAACTTATATCTCATAAATTAGAACCCAGCATCAAAAGGCTAGAAAGTCAACAGGCACCTCATTGGTTAATATCAACAGCTCCTCTCACAAGTTACATTTTTCCATATCACTGTTAGGTCAGCCTTTCCAAGTGATCCCCTTCCTGCCCACCATTGCCTTATTCAAGACCTAAAATAGCTCCCTATTTAATGAAGGTGTCTCTGAATATTTAAAGTCTGCCCTGACATGACCCTGCATTACTCAACTTGAAGCCCTGACTC EMBV3_15364 ACCGGAAGGCTGTGTCCTTCAGTATTAGAGGAAATACATATAACTCTGCTATTAATTTAA Gene GeneID:514807|HABP4:NM_001081523:8_cdna Constitutive 2 NULL GeneID:514807 8 GENE HABP4 MGC143277 hyaluronan binding protein 4 EMBV3_27233 GAATCCCGAAGATTCTAGTAGCCATGGGCCTGGTTTGTGCTTTTCTCTCACTCGTGGCCA Gene BVV0102_085321 + 0 NULL GK000019.2:23946815-23961073 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095854 TCONS_00095849 TCONS_00095853 TCONS_00095855 TCONS_00095848 TCONS_00095852 TCONS_00095851 TCONS_00095847 TCONS_00095850 1 XLOC_057809 Coding TCONS_00095855 XLOC_057809 Coding Coding METTL16 19:23952630-24023455 = TSS71360 10600 1 TCONS_00095855_2 561 0.0734905660377358 10 0.850474415452389 1.41317150198743e-09 3.82353871212416e-05 1.02095801492485e-08 2.78900836423541e-05 9.10382736330735e-05 8.6288925627866e-10 1.55053718278734e-05 1.95178375202956e-08 2.90981888421306e-10 8.97219239629433e-06 0.00011344988708701 0.000130650357330264 7.55863564961931e-05 0.000178449862499087 7.92754782467892e-11 0.00457430089965911 7.33649364435992e-05 0.00140523362315844 4.91287596230385e-06 0.000408802892910732 0.000142812554578436 0.00102987953707056 0.00107742883565765 0.00188745160853313 0.000160356450046854 3.33279152916518e-05 2.84560401282131e-09 3.16547280355985e-05 0.000187437408141402 0.000699558236142394 NM_001192216.1 METTL16 Bos taurus methyltransferase like 16 (METTL16), mRNA. 0.0 3802 100.00 0.19877358490566 NM_024086.3 METTL16 Homo sapiens methyltransferase like 16 (METTL16), mRNA. 0.0 2430 85.51 0.200094339622642 TCONS_00095855_2 sp|Q86W50|MET16_HUMAN MET16_HUMAN Methyltransferase-like protein 16; 0.0 1056 91.25 0.996434937611408 1 coding 0 0 1 1 -0.0440249281287542 0.760802296020239 -0.00767503455216575 0.88094523840636 CGAGGCTGAATGGAGGCCCAAGATGGCGGCGCACTGGGAGCGTAACATCTGCGTTTCTAGGATCTTCGCGCAGCGGGTGGTTAAGACTCTGGGGTTGTAGAGGTCCGCACTATACTAGTCGTCTGGCAGGAACTTTGACTTCAGAGATGGCTCTGAGTAAATCAATGCATGCAAGAAATAGATACAAGGACAAACCTCCTGACTTTGCATATCTGGCAACCAAATATCCAGATTTTAAGCAGCATGTTCAGATAAATCTGAATGGAAGAGTGAGTCTTAATTTTAAAGACCCTGAAGCAGTCAGAGCTCTAACTTGTACTCTGCTAAGGGAAGATTTTGGACTTTCTATCGATATTCCGCTGGAGAGACTGATTCCTACAGTTCCCTTGAGACTCAACTATATTCACTGGGTAGAAGATCTTATCGGTCATCAGAACTCTGACAAAAGTACCCTCCGAAGAGGAATTGACATAGGTACTGGGGCATCCTGCATCTATCCTTTACTTGGAACAACCTTAAATGGCTGGTATTTCCTTGCAACAGAAGTAGATGATATGTGCTTCAACTATGCAAAGAAGAATGTGGAGCAGAATAACTTGTCTGATCTTATTAAAGTGGTTAAAGTACCACAGAAGACACTCCTGATGGATGCTCTTAAAGAAGAATCTGAGATAATCTATGACTTTTGCATGTGCAACCCTCCCTTTTTTGCCAATCAGTTGGAAGCCAAGGGAGTAAATTCTCGAAATCCTCGAAGACCCCCACCCAGTTCTGTAAATACAGGAGGAATCACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCATGACAGTTTACAGCTTAAAAAAAGATTAAGATGGTATAGCTGTATGCTGGGAAAGAAATGCAGCCTGGCTCCTCTGAAGGAAGAACTTCGCATACAAGGGGTTCCTAAAGTCACCTATACTGAGTTCTGCCAGGGTCGGACAATGAGATGGGCTTTGGCTTGGAGTTTTTATGATGACGTAACAGTACCATCACCACCCAGTAAGCGAAGAAAACTAGAGAAGCCAAGGAAGCCCATTACGTTCGTAGTCCTGGGGCCTGTGATGAAAGAACTAGCCCTCAAAGCATCATCTCTGGGCCCTGAGACAGTGGAAGGCATCGTGGTTGTGACAACATGGATTGAAAAAATCCTCACTGATCTAAAGGTCCAGCATAAACGAGTTCCCTGTGGAAAGGAGGAAATCAGCCTTTTCCTAACGGCCATAGAAAACTCCTGGATTCACTTGAGGAGGAAGAAAAGAGACCGAGTGAGACAACTGAGAGAGGTGCCCCTAGCGCCCAAGGACGTGATCGAAGCCCTGGAAGAGAAAAAACCTCCCCCGAGGGAGTCTGGCAGTAGCCAGGATGTTGCCCAGGGCCCCCAGGAGAGTGCCCTGGGGGGCCCTGCTCCACCGGAAGGCGAGTCTGCCACTGTGGGGGGCCATGGCCCCAGCCAGGACTTGCTTTCCCAGGAGGAAAACCCAGAACCCACGGAGGATGAAAGGAGTGAGGAAAAGGGGGACATGGAGGTTCTGGAAGGTTGTAAAGGCTCTAGTAATGGAGCCCAGGACCACGAGGCTCCTGAGCCCTTCAGCAGCCCAGCGTCTGAAAAAGGGAACCATCTCCAAGGAGTGGCTGGACGTTACTTATTCAAGTGTCTGATAAACGTTAAGAAGGAGGTAGATGACGCCTTAGTTGAAATGCACTGGGTTGAGGGCCAGAACAGGGATTTGATGAACCAGCTTTGTACTTATATACGTAACCAAATTTTCAGGCTTGTTGCTAGTTAACTCCAAAATTCTCGCACATTTGGGAAAGTTCTATAAAGCAGCTTGCTTTGAAGAGTGGCCTGGGAGGGGTGGCAAGCTGAATTCCATCATTAGCCCACTAGTAACATTATGTGGAATTGTCTTAAAAAACCAACAAATGAGTCAATTTTTAAACACCTGCCTCCTTTAAAAAAAAAAAAAAAGAATTACAGGGCATTGTAGTATGGTAGTTCAGAGAAAGAATTGTGGTGATCAGCATCAACAAAATGTCATCGGTAAACTCATAAGGGATTTAAACCTGACTTAAGCTGATCACCTTTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAACCTTGTGGGCTGCAGTCCATGGAGTCGCAAGAGTCGGACATGACTGAGTGACTTTGACTACTTCACTAAGCTGATCGCCTTGGCCTCAGACTGGTTTTCTGAGGCCAAAAGGATTATTTTTGCAGTCTGATCCCGGTCAGAACTCAACAGTGCATCCTGCCTTCTGTGTCAGCCTTGGTTGCTTCTGAGAAGGGGTGACTTTCTCACCCCTGCCCGCCTGCCCCTCCACCCCATGGAGGTGGTATACCAGGGCGGATAGCTCTATACCCTCTTCTACAGTCACTTGCAAGACTAAAAACTTTGGGTACATACGATTGATGACCCCTGTGTCAGTCCTGAGAAAGGAACTAGCCTTTTGAGAGTCAGGGAGAGAAAGCTCAGTAATGCCAGGAAGAAGGCCTGATCAGGGAGCGCCTGGAAACGTTGAAGACAATCGGCACATTCCTGACTCTTGTCTGTTTTGGATGTTGCTTGTTTCAGAAACAGAATTAGGTAAGCAAAACTGCCAGATACAACTGCGATGCAGCAGAATGAAGCCATACCCGTGCCTCCAACCTGTTTAAAGAACTGTTTTGTAGCAGTTTGACTGGTGTGGATTTTTTTTAAAATTTGTTTTGACGTTTGAAGTGGAGCTAATATAAGAGTATTCAGAATTGAAAACTGTCAGTCCTGTTTGAATCCTGGGGTTGGGGAAGATACTCTCTTGGCTTTCAATGGATAAGTGATGGGTGATGGAAATGAGAAATGGAGCAAGATATATTTACATATAGTAAGTTGCTTAAGAAAGCCTCATCTATTGGCAGATAAGTTACTGCTAATCAAAGATGGTTTTGGCACAGGAGTTCGTTTGTAATCCCTTCTGTGTTTACCTGTTGCCATTGGAGAATTCTGAGGCCAGGGTAACTGTTCTTAAAACATGTTTCCTAATTGTGCTGTCAGGGCTCAGCAGGAATACCTCTGGGAAAGGCGTCTCTTTTTTGTCCTCTTGGTGTCTCGGTTACCCTCTGCTGTGCTTGGCTTTTACTGCTTGATTTTATACCAGCAGCTGAGGGTTCTATTTATCCTGAAAATTTTGAGTACAGTGCCATTGCCTGCAAAGAAGACTGTAGTTAAGCCACACTTTTGAAAGGTGGCTGTTGGTTGGGGCATAAAACTGATGACCTTGGCATACTTTGGCAGCAGCTAGACCAGTCCTTCAGCAAAGATACTGGAAATGGAAATAGGACCATATCATACCTCTCCATGGCAGTGGAGACAGAGCTGTCGAAAAGAACATACGAACCAACCAGTGTTCTAAGCTGGTCCATGGACCTCTGGAGAACCCAGAGCTTCCTGGGTTATTTCCAAAGGCTCTGTGGACATGTTTGGGTTTTTTTCTGGAGAGAAGGGTCCCCAAGTTAGAGAGAGGAGCTACTAACTCACTGGGGATTAGGAACCGCTATGCTGGTTAGCCTTTGACAGGAAAAGGAAACTTAATGCCCAGGGTCCCACAGAGTCCAAGATTCAGCACAGGGCCTCGGATTCCGGTGATCCAGTCATCTCCTCCATCCACCCCCACCATCCTCTCCTCACCTCTCATAACATTGGAGTCATATGCTGGACCCAAACCTAGTTTCTGTCTTGATCAAATTTTAGGATACGTGAGTTAGGTAACGACTCTTCACTCAATAAAGCCGTCACTGTTGGCATGTTTGTTTCACTGTAAAGGAGTAGCACATGCTCATTAAGGATTTGGAAAGATCAAAGGAGGAAACAGCTTCAGTCACCCCTCGCCTCAGCCTCCGGGAGCATAGCCCCTGTTGGTATTTCAGTGTTTCCTTCTAGTCACTAATCTGTCTCTATAGATGGGGGGTGTGAGTGTGTGGGTTCAACTTTGGTTGTGTTCATTCTGCATATTCACTATGCTTTTTTCCTCCGCGCTGTCACAGGAGTGTATTATTGGTCCTCCTCACTTGTTCACAATGTATTTCAGCCACAGTATTAGCCTTTGTTAAGTCTAGTACTTAGAGATTCCCAGGGAATCCTCTGTGGGCCTGGAAGCACAAAAGAGCTGTCTTACGTCTGTGTGTGTTTGGTGCCCCAGGTTTGAGGCTTGGTGCAGTGGAAGATGCTTTATAGTTTAAGCTGATGCTCTTAGAGTTTAAGAAGCATATGGCTAGAGAGCCTTCCACTGCTGGAACTGTGAGTACAGTTTTTGCATTGGTGTGTCTTCAGTTCCTTCTCTGAGAAGAATAGTTTATTTCCATCTAATGAGAGAACATTGAAACATTTTTAAAAGACATTTAAAAATCCTTTCACTTACACATATACTTGATAATTGTGTGATATGGGGTAGCCTATACCTCTGATAAAAGGGGAAGATGAAATTTTTTTTTTTTTAAGAAATAGATTACTGACCTGTGTGTCATAATGTTGAGTGATAACTGCCTAAGTGTCTGGAGGTCAAGTTCATGTTGATGGATTAGTATGAAATTCAGTCTTTGTGGTGGTATCTTAAATTCTGTTCTGGTCCCTGGCCTGGGCGTCTGATCTCTTGATAACGAAAGTGGGAACAGAAGCAGGACTTGTTTTCCAAGGAGGGGAATAAGCTGCTTTTGTTCTTCGGAATCTGCTTTGCTTCCAGCAGTGGGTTCCTTCACCCCACATCCTTGCCCAGCTATTCACACACCAGAGCATACTGCTTGTTCTCACAGGGTCTGTATCTCTGTGGTGGAGTTTCAGCTAGTCTTAAGGGAGTGTGTGGATGATATATACTTAAAATTTTAGTGTGTATTTTTAAAAACATGAAACCTGTCAAAGCTTACCATATGATTACACCTGCTTCTAAGCTCTGACGTGTAGTAAAATTGCAAGGGGTGGAAAAGATGCAAAGGCCTTTAGAAAATTCTAGGCCTCCTAAAAGAAGCCCCTCCTTCTTACTTAAATCCAGGTGTTTCTGCTGCGGCCACACGAGGGCGTATGTGGCTTTTTTTAATCAGCTTCCCGGTGGGCGTGGATAAAATTGTGTCCTTGGTATTTTCTTGAAATAGCCAGATAAATATTTTTATGTAAGCAAGTACGTTTTTACGTTAAAAAACTTAGAGAGATGAAAGAAAGAAGGGAAAACTCACCACCCTGTGGTCTGGGCATAAGTTTTCAACCTTTTTATGTTTCTTTATGGTCCCAGATGATTTAAAGATTTTTTTTCTTTCCACCTGTCTTACTACTCTAAAATAGACCCAGGCTGTGTTAGTCCTTTGGATCAACTTTTTATTGGTCTCTAGTTAATGGGGTGCTAGAAGGGGACATTTCATGATTTTACATAGTAAGTTTTCCAAAACTACTATTTGTGTCGCAGGAAGAATAATAGAGCCTAAAGAAAGAAGCTGCTTTCAGCATTCCTAAGGAGTCATCTGCAGAAGGGAAGTCTCAAAGGTGCAACACTTTCACAGCCACATCTCTTGGAAAAGTTGGCACTCAGGAGAATCAGTTTGCTGAATGGGCATTAAGCCCAATAAAAACCCAGAGGACGCTTACTAGTGAGGATGGATTGGCCTCTGCCTCCTGGAGCAAGGTGTTGATGGTCTTGAACCTTCTCATGCTTCCGGGTGCAAACCTCTTGGTGCTTGTGCCAGCACCGTATTAAGGAAGCCTGGGGGGCTCACCCTGCGAGCAGTGGGACCTCACACACATACCAGAGGGTTCCTGCTCTGCTCTGCAAAGACATTCAGATCCTCTGTATGACTCACCCAAATGACTAAAACAGCAGTTTATTTTTTTTAATTGCTGGTTGGAACGGCTAATGCTGCCTTTTGGAGGGTTTGCTTTTACTCCAGGGGACCATGTTGTGACTGAAGGCCTTGCACCTCTGAATGCTCTCTGAGGTGCAGCCTTTTCTCCTCCCCTCTCTCAGCCTGGCAGAACCATTGGGGACTCCAGGCTCTCTTCAGGGAAGCAAGGGATCTCAGGTGCTGACTAGAAGCCAGGGAACTGAGATCAGGCGGAGTGGGTCAGAAAGTGCAGGGGCGTGGAAAACAGTGAAGGTCACAGACTTCACAATTCATCAGACCCGAGTCTACATTCCAGTTCCACTTACAGGGTCAGTCATTCTCACTGAGGCTTGACTTCGTCATACAAAAGGTGCTGGATTCTCAATTCCAAGAGTCATAAAATAGCAGTCAAGTGAGAGGAATACTAAAGCCCCTTGGAAGAGTCCATAAACGAGGGGTAGGCTCATTGCTTCTTAGTCTCTCTTGAGTTTTCACTTTCTGCTCAGAATATCTTCTTTCAAGAGACTCAGGTGAAAAAGCCAAGACCTCAGATGTGTCAGTGCAAGTATAGGCTGCCACTCTGACTGAGAGCAGAAATCCAGACTTCTGTGTAGTGGGAGGATAAACGGAACCAATACTGACTATCAGTCCTCTATGTCAGTTGTCTGGCTTAACCCCGCAAAGAGGCGTGGAGTCCCTGTGTGCTTGCGTAAAGAAGTGGCAGCTCAGAAATGCCTTAAATGACTTGCCCTAAGGTTGTTTACAGGGACTTGACCTCAGGTCCAGAGATAGGAGACAGGGATTTCATATCAATCTCGATTCGTCACAAGTGCTACACTTAGGATGGAAACGGACTCCTGGGCTCCATGGACCCATCTCTAGGGAAGGAAGCTTCGACGATACGACACGGGGAAGAGAAAATCAAGTCTTAACCAACTCTGCCATTGAGCATTTGAAGGTCATATTATTTTCCAGCCTTTGATCAAGGAGCAAGCTTTAATAAAATGAAATTGCTTATAATTAGTTCTTAACTTACACTACCAAATCTTTATAGAATTTTGGATTTGGCAGTAGTACAGATAATTAAGTCGATAGTGAAACCACAGTCTAGTGCAAGCACACACTGGATCGGAATCAATGTAAAATAACTGATAATTAGGTAATGACTCTTTGACAATGCATAATTGTATAATAAGGGGAAGAAGGATTTTTTTTTTTAGGCAACATCAAATATTTCACTTACGGAAAGCAAAACTGATAGACTTTAGATCTTGCTACAGAAGGGTAACAGTCATAAAAAATAGCAAGTCGTCTTCCCCAGGTAAGGGAATGGACTGTGTGAATCGAGAAAAGGAAAGGCTGCCTGCCATCTGGTGGGAGTTCAAGGAGTGTGGCTGAGAGTGGAGGAAACGGAGCCAGGAAATTCCCAGCTGGGGGAGCCTTGGCCGGCTCCAACAGCCAGCCTGCCCCCAGGGGAAGCTGCCCTGCGAGCACCGCTGAGCCTGGGACAGTGGGTAACCTGCCCCGCTACGTGTGTGATGCCAGTGGCTCCATGTCTCTTGCTGGGAAGTGGGCATTCCCAGTCTGGTCAGGATCCCTAATTGAAGTCTCTTTGTCCCAGGATTTGCCTTCAGGGGGGCAGATGTGGGGCTTCTGGAGCAAATGCTGGCCTCTGTTTTATTAATGGACACTTTCATTCACAAAGGGAAGTATTTCCTCATCTTCTACCCCAGGGGCCAGACAAAAAGGGCTGGAGCTCCCACTCGCACTGGTGGAGCACTGCTGCTATCAAGTAACTTGTGTTCCATGCCTGCTGGTTACTGCTGTGCAGAAGTCGCTGCCCCGTGATGCCGGATCTTCTTATTTCTTGAGGAAAGCTGGAAATCCAGGTTTATGACAAGTTTACTTGATGGTAAATCTTCACAACGAATTCAGTATTTTACAGAAACCTGGTCGACCATCAGTTTGTGGCCTCTTCTACCACCAGGTGGTAGAACTTACCTAAATATTTGCTGCCTCCACTCTCCTAACTCGTTTATTTCAGCCACTGAAGTCTGGTTGCTGCCTCCCCACCTCTTTAAAGAGTTCTCACCTCTTAACAGGGAGAATCCCGAAGATTCTAGTAGCCATGGGCCTGGTTTGTGCTTTTCTCTCACTCGTGGCCAACCTTATCCACTCCATGACTTTATACTGGTCACTCCTGCATTCTTCACACACAAATCTAGGCCTTTCCTGAACTTTAACCTTCCACATGCCTCACCTCCTGTCGGACATGACCCCCAGGACCATGGCTGTGCTAACTCAACTGATTTGCACCTGCGTCTCCCGTACTCTCCACCACATCCAGCCAGCTGTCCAGAATAGAAATCTCTGCTCCTCCCTCTCCTTCACCGCTAGGGTCTAAAAATCTTCCACCTGAGAAAGATCCTCCCAATTCCAGCCCAGCCTCTTCCTCCATCCCTGGTGCCACCACCTTAGCGCCCTTCTGCGTCTCTCACCTGGACTGTAAGGGTAGCCTGAACCGTTTCTGGGGGATTTCAGAATTAAGCAGCAGGAAAAGTGGGTTGGGGAGGGGTTGGGGAGAGGAGTAAAGAAACAGGAAGGAAAACTAGGATGGGAAGTAGACCCAGCGCCCCAGGTCAAGTTAGTTGAGATCAAGACTCGGGTGAGGCTCTTCCTGGTCAAGCACGCCAGAACTTTCCCCCTTTAACATAATTTCATTTTACAAAAGTGATGTTTTCATTAGAAGATATTTATAAAAGAAGGAATAAAAGTTTACAATTCCACTACTCAAATGGAGTTGTTTTACATTTTGTTAGTATTTTTATATACATATATATATTTAAGCAGCAAATGTGGAATCAATGGTCTGTGTTACTGTTCTATAAATGTTTTCATTCAGCAATATGTTGTGATAAATTTTTTCTGGTTATAAAATTAACCTGTGTGTCATAAAACTTGTGAAAATAAAAGTTACCAGAGGTTGCACTGCCCGAAGACAAGCACCAGTAATATTTTGGTTTATATCCTGTTTTCTTCACATGCGTTTTTGTGAGCGGCACTTCATGAAACCAGTTGTTCCTTATTGGAAATCGAGATTTTCTCGTTTTCACTTTTGTACATAATGCTTTAGTGAATATCTTTGTACAGAAATGTTTGTGTGTTTTCTTCCTGCTTTAGGATAAATTTGTGTAAGAATTACTGAAGCAGAAGAGATAATGTGCTTTTAATGGCTTTTCCGTATATTACCAATTTGCTCACTGAAAACACTGTTCTCCTTTACCATTTCTTGTCTTTGCCACACATTTGGTGTGTGGATTTTAAAAATCCTTTATCAAGTGATTGGCAAGAATATTTTCATTGTTTTAGTTTTATTATGGTATTTGCAAGGCCAAACATCTTTGTGTATATATTTATGTTCCTATAGTTTTTGTTTTACGAATTTTAAGTCATGTCCTGTGTTCTCTTCTCTACCCAAGTGTTCATTTTGTTGCTGACATCCCAGTGGCACAGCTTGCCAGCATCTTCCTCCATTTTGTCATTTACCTTTTCCTTTTGTTTATGGTGGTTTTGTTTTTACAGTCAAGGAGCTTTTAGAAAAGTTTATATATATAATCAACTGTGTCAAACTGTTCCTTTCAATTCTCTTTGCCTTTATGGGTAGATAATCTCTTTCACCATCCTTGGAGCCAAAAAACGTTTGCCTATATTTTATTTTGGCTCCTTTGACATTTTGTTTTGCATTTAACACTTTGCGTTTATGTAGGTGTGTGGTGGAAGTTTTAAGGACCTAATTGTGTTTAGTGAACAGTTTAGAGTTACCACAGAGTAACTCTTCTGAGAGATGGCTGGTGAGCTCTAGCCCTGCCTGCCCTGTGAGGTGTCTGATGGGAACCCGGACTCACGAGGGCTGGGGGCTGGGGAACAAGTTGAGTCTGTCCTATCCCAGCCTCCAGCCTTGAAGTGGGAGGAGTCACTGGCTGGAACATGGCTCCTGGAGAGTGTAGGGTGTCCCCAGCACTGCCCCATATAGACTCTCCTGATGGGCCCTGGGCCCTTGGTAAGAAATCCTATTGTGGGCATGGAGCTGCACCCTAGATCAGGGTGGTCCGGCCAGTAAGAGGCCACTGCTGCAGGCCTCACACCCTCTTCTGGCTTGAGGGGCACCAGTCACTAGTGCAGGCAACTGATACCTTGGGTTTTAAAGACTTGATCTGCAGCCTTGCTTTTACCTGTGAGCTGAGATTGGCTAGGACCTAGATGGAGAGTCCTTTGTGTGGGGCGCTGATTGCATTCCAGCCCCTCTGCCCTGGGAGGAGCCTTCGGGTCCAGCTGGCTCTTGACTCACATGGCAAAAACTCTGCCTGTCTTTACTAATAACTTTGCCCAGTCTCACTCCCATGACCTGAATTAACTTACTCTCATGAAGCCGCCTTTTTTTTTCTTGCTTCAAAGGAGTAACCAAAGTCCTCGACCTTTCCCATCTGTCTTTCCACCCTGACCAGCTTCCTCCTTCCCTAGTCATTCACAGCCCCCATCTCTCTAGCTGCATAGCTTGCTTGCCAGCCACTTTGGTTTCTCAGAAAAGCTCAGTGTGTGTGGCTCCTCCCTATTTGCTTCTGAACTGCATTTCTTTCCTTATTACTCAGTGTCCACACC EMBV3_32518 TCATCACGGACCACCGCTGGAGCAATGCAGAAGGGACAACGGAGAACATCGCAGCCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30469 AGTTCCATTCCCGCTACATCACCACGGTTATCCAGAGGATCTTCTACACCGTCAACCGGT Gene GeneID:100298746|LOC100298746:XM_002684002:2_cdna Constitutive 0 NULL GeneID:100298746 Un GENE LOC100298746 NULL similar to protein phosphatase 2, regulatory subunit B, alpha EMBV3_32603 AGAGTTGGGACAGGAGAGTCAGGCCTCGTCTTTTGTTGAGACATGGAACTCTGCTTGCCT Gene BVV0102_082090 + 0 NULL GK000015.2:1-161261 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162568 TCONS_00054136 TCONS_00066112 TCONS_00066108 4 XLOC_099449 XLOC_031945 XLOC_040830 XLOC_040826 NonCoding TCONS_00162568 XLOC_099449 NonCoding NonCoding - 28:39290917-39292435 - TSS121900 1518 1 TCONS_00162568_4 115 1 0 1.55079092922625e-05 1.03705799114025e-05 3.66497236220272e-06 2.41025768202674e-05 0.000117391122692313 2.67938983544906e-05 7.98068742883267e-06 4.51457622271782e-05 7.64705154345281e-05 3.69763967003794e-05 2.75626670922192e-05 3.64540175330926e-05 5.76038685678148e-05 6.7804984465664e-05 0.000123845841134374 0.000133455356586169 5.71758767008196e-05 6.71747995369523e-05 3.93660580743495e-07 2.69850042208059e-05 1.23004832145737e-06 4.68844631536613e-05 5.43557384341348e-05 7.3742047868692e-05 3.80351187163498e-07 7.98888456854229e-06 1.88027047308879e-05 3.78843535914522e-05 5.51451887783326e-05 1.13101518028248e-05 XM_002698950.2 FRMPD2 PREDICTED: Bos taurus FERM and PDZ domain containing 2 (FRMPD2), 4e-08 64.4 78.63 0.0856389986824769 0 noncoding 1 1 1 1 0.0652229929338008 0.594942803938088 -1.43158459034692 0.00152500914305855 CTGCAGACTTGGGACAGGAGAGTCAGGCCTCGTCTTGGGTTGAGGCATGGAACTCCGCTTGCCTCTCGAGGTGTCCCCGGGGAGAGAGGACACTTGTCGAGCTGTATTTGGAACCTGGGGGTTTTTCCGGACGATGCACGGGCGAGTCACTGCCCCTTCGTGTTGACTTCATTCACAGGATGGAGTTCGAAGAGGTGTTCGGGCATCGGATTCCTATCAAGAGGGGACGGGGAAATCGGGGTCCTTCGCAATGTGGAAGCACCCACGAGGCCACGTCTGGAATGTCGTCGTGAGACCGGCCTCATCCTGAGGTGCGACCGGAAGGTCAGGAACCCCTTCCAGACAAAGCAGGGGAGTCGAACCTCCTGTCCAGATCAGGAGGGTAGAAGTGGCTCAGAGGAAGTGGTGCCGGAAACCCTCGGTGTTCCTCTCAAGGGAGACCGCGATGTCGGGGAACATTGTGGGTCACATCAAGGGTGCCAAGTACCGTTTCGACCTCCAATACCTCACGTGGGACTTCTCCTGAGACGCTGTAGCAGGAAAGGGCTTCATCTTGCGATGAGGGGGGAGTCTCGGTGTTGTTCTGGAGCAGAGGCCCCAGTGTGCGGTTTCAAACAGGAACGACGGCGATGTCAGTGAGCCTCTCGAGGGGTGCCAGGGAATTCGGGTCTCCATGCGAGTGGCGAGGGGGAGCGCGTCATTGCTCTTGAGCCATGGTAGGGGAATCTGCCCTCCAGGCGTGTTGAAGAAGGTCTCTCGAGGTCTTTCTCGGGTTGAGGCAGCAAACCCAGGGTTCCCTCGACTTGTGCAGGTGACCTCAGGGGGCTTCTCATGGTGGCTCTGGGAGGTCAGGGAAAGTGGAGGTGGGAGGGGCCTCTCGGGACTCCACAGGGTTTGGTGCATCGGAAGAGGGCCTCATCTCCAGTTGAGGCAGGAACCTCAGGGTTCCTCTGATTTCGGACTCCGCTCTCAGGGTCCCTGCAGACTTGGGACAGGAGAGTCAGGCCTCGTCTTGGGTTGAGGCATGGAACTCCGCTTGCCTCTCGAGGTGTCCCCGGGGAGAGAGGCCACTTGTCGAGCTGTATTTGGAACCTGGGGGTTTTTCCGGACGATGCACGGGCGAGTCACTGCCCCTTCGTGTTGACTTCATTCACAGGGTGGAGTTCGAAGAGGTGTCCGGGCATCGGGTTCTTATCAAGAGGGGACCGGGAAATCGGCGTGCTTCGCAATGTGGAAGCACCCACCAGGCCACGTCTGGAATGTCGTCGTGAGACCGGCCTCATCCTGAGGTGCGACCGGAAGGTCGGGAACCCCTTCCAGACAAAGCAGGGGAGTCGACCCTCCTGTCCAGATCAGGAGGGTAGAAGGGGCTCAGAGGAAGTGGTGCCGGAAAACCTCGGTGATCCTCTCGAGGGAGACCGGGATGCCGGGGAACTTTGTGGGGCGCATCAAGGGTGCCAAGTACCGTTTCGACCTCCAATACCTAACGTGGGACTTCTCCTGAGACGCTGTAGCGGG TCONS_00159686 TCONS_00159687 . 5' 142692 TCONS_00159686 TCONS_00159687 . 5' 142692 EMBV3_24622 AGGGACTGCAGATACACATGGAGTTTCATTAAAAGAATAGGCAACACAATCAGGATTCTG Gene BVV0102_425605 + 0 NULL GK000008.2:80687988-80779897 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28911 CCGTTCCTGTGCACGTAAGAAACTGAATCAAAGCCGTAAAAGGTCCCAACGTATGAGGCG Gene GeneID:781841|LOC781841:XM_002699611:9_cdna Constitutive 0 NULL GeneID:781841 X GENE LOC781841 NULL hypothetical LOC781841 EMBV3_12087 TGCGCACCTTACCAGGAGAGTTCAGCTTTCCACGGTTCTTCTGTTAGTCCTGGCAGTCCT Gene BVT0102_095317 + 1 EMBV3_35987 GK000007.2:83658728-83706300 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214396 1 XLOC_130677 Coding TCONS_00214396 XLOC_130677 NonCoding Coding - 7:83671577-83698042 - TSS160375 650 2 TCONS_00214396_1 80 2 0.975513905683192 0.00124621645355341 8.63424545412003e-05 8.4350434116586e-05 0.000143368825352916 0.000266963615601003 1.31093386255898e-05 0.000377384083499785 9.30630808526584e-05 7.17642026898898e-05 0 0 3.73881529205017e-134 6.41573180689752e-05 5.97674370411902e-128 2.44282554769415e-145 0 0 0 0 0 0 0 0 0 0.000559207526123385 7.81968659073959e-05 7.36564138858664e-97 0 4.153922260584e-22 0 XR_235368.1 LOC101907457 PREDICTED: Bos taurus uncharacterized LOC101907457 (LOC101907457), 0.0 719 100.00 0.610769230769231 0 noncoding TCTTTTTCCATGCTCTCATTTGGGTGCTCTCGGTTTGCAAACCATTGTTCAGAATGTGGGCAATAATTTTTATTAGTTGCTGACTATTGGTTTTATTATGATATGGCCACTTCTGAACCAAGGATATTTAATCGTGCCTGAAGTGGGGCTCAGAGAAGACAAACCCTGCAACCTCAAGCCAGTGGGCAACCTGGCTGCTGCCTCCCGTGAGCCCTTTCTGCCTCTGTCTTCCCGCCAAGCGCAGAGTCCCTGGAACCGGCAGTGGATGTGCGCACCTTACCAGGAGAGTTCAGCTTTCCACGGCTCTTCTGTTAGTCCTGGCAGTCCTCCAGCTGGCTGAGGGGACCTGTCTCCTCCAAGTAGGACCCCAGCACCAAAGGGCCCGATCTGTGGCTCCAACCATTCACTCCCCAGAGTAGGTTCCCCACTTCCCCACATATTCCCTTTTCCTCTGAGTCCCCGCGCAGTGGCACAGGTTCCAATGCTATTGCTTTCCTTCTCTTCCTACCTGATTACCTGTGTATCTTTCTTAGAGCTTTGGTGTACAGGAGTCCTTCCGCCAGTTTGCAGTGAAAACTGTCCCACATGTAGATTATCTTTGATGTGTTCATCAGGGGAGGTGTGCTTCACATCCTTATACTCTGCCATCT TCONS_00217831 TCONS_00217832 TCONS_00217833 TCONS_00217834 TCONS_00217835 TCONS_00217836 TCONS_00217837 r 3' 8259 TCONS_00217830 r 5' 12851 EMBV3_07981 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18452 AAAACAGGCGCACACACTCCTCCCAGTAAGAAGGCCAGCAATGATGCTAGTCACAGTGAC Variant GeneID:506246|FGFR1OP:NM_001077859:2_cdna 423^482 1 EMBV3_16973 GeneID:506246 9 GENE FGFR1OP NULL FGFR1 oncogene partner EMBV3_41826 GTCATGTCCCCACTGACAATGACTCTCTCCAGATGTGGTCAGCGACGAGTTAACCATTTC Gene GeneID:522315|LOC522315:XM_002697458:74_cdna Constitutive 0 NULL GeneID:522315 23 GENE LOC522315 NULL similar to olfactory receptor MOR256-8 EMBV3_28586 AGCCGTACTGGACGGCCGCGAGCTGCGGGTGCAGCCCTAGGCGGCGTCGCCGCAGCAGAT Variant GeneID:508312|SFRS2:NM_001034318:362_cdna 476^573 3 EMBV3_24960 GeneID:508312 19 GENE SFRS2 MGC127100 splicing factor, arginine/serine-rich 2 EMBV3_42569 TGGTCCACCTACCCAATGGCAGCTCTTCTACTGAAGGGGACAAAGGAGAAATCATAGTCC Gene BVT0102_269425 + 0 NULL GK000004.2:95233878-95289059 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27194 AGTCAAAATTTCAGGTGCATCCATCCTATCACCATGTCTTCTCGGCTTCCTGCTGCCTGC Gene GeneID:281705|CNTN1:NM_174280:15_cdna Constitutive 0 NULL GeneID:281705 5 GENE CNTN1 MGC179417 contactin 1 EMBV3_42674 GCGGCGGTGGTGTCCAGAGGAGCATGACCGACATGAACAGGACCTTCCCCGACAACGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13624 AAAAGAAATGCCCCAGGAAGCAGAAATGCCCCCAGGAGTCTTGGTCTCTGTCAGGAAGAG Gene BVV0102_031817 + 0 NULL GK000030.2:37660713-37921910 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09906 CAAGTATGGTGAAGGCCACCAAGCATGGATTATTGGGATCGTGGAGAAGGGTAACCGCAC Gene GeneID:507470|SEPHS1:NM_001075316:76_cdna Constitutive 0 NULL GeneID:507470 13 GENE SEPHS1 MGC142727 selenophosphate synthetase 1 EMBV3_21099 TGTCATTCCTGCACAGCATCCATCAGCTAATCCTCCTTAGATGTAACTGGGGCCTTCCTG Gene BVT0102_350860 + 1 EMBV3_00922 GK000021.2:23387740-23429311 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118867 1 XLOC_072753 NonCoding TCONS_00118867 XLOC_072753 NonCoding NonCoding - 21:23419642-23421599 - TSS89161 1024 4 TCONS_00118867_3 40 0.12109375 2 0.477505112474438 0 0 0 1.62190226650165e-05 2.89287265091324e-05 0 0 0 6.16416157290576e-05 0 0 0 0 0 0 0 0 0 0.00203782546680659 0.000323051843660404 0.000127477195535422 0 0 0 0.000162386211973291 0 6.86618594341665e-05 0 0 0 NR_046096.1 LOC283692 Homo sapiens uncharacterized LOC283692 (LOC283692), non-coding RNA. 7e-35 152 80.92 0.166015625 0 noncoding 0 0 0 0 -0.140540579189404 0.398766973671834 0.001436517434551 0.980840802248255 GTGGAGGAGGGACCCGGCGGTGGGGTCAGACTGTGGTCAGGGAGGGCGTCTTTGGGGTAGGAGCGGACCCCGGGCTGAAACCCCGGGCAGGGAGTGCCACACCCGGATACCTACAGCACAGGAGCCAACTGAGGGTGTATGGCAGCACCAGGAAGGCCCCAGTTACATCTAAGGAGGATTAGCTGATGGATGCTGTGCAGGAATGACATCTCAGCCCGGCCGAATCTTTCAAGACAAGCTGGAGAAGCAGTTTTTGTGTTTTTGGGGGGTTTTTTTAATGTGCAATCTTCCTAATTTTAAATTTGGTCATTAATTCAAAGAATCAAGCCCAGCCTATCCAGGGGCCTCATGCAGCTCATGCTTTTTCTTCCCTGACCCAAAGCTGAGCAAGAGAAGAACCGGAAACTGGAATAGTGCCCAAGGCAACAGTACCTGGGAGCTCTTTCATATTTTAAAACTCCCAGCTGTAAGAAAAGGAAGGCATCTTTCAGGTGTCTTGGAACAGAAATTTGTGCTGCATAAAATCCCTCTTCTTAAAACTTTATGTTGCAGTAATAATGAGAATACAGTTGACCTTGTACTTGACTGAGTACTTGGCCTGTGCTTGGCACAGTTCCAAGTGTTTCACCTGCATTAACCCATTTGCAGACAAGGAAACTCAAGCTCAGAGAAGTAACTAGCTTAAGGACTCCCAGTTTAAGTAGAAAAGTGAGGACTCAAACCCAGGCAGTCTTCTGGCTTCAGAGCCTAAAGCTTTAACCAGATAAGAACAAAATGTCCAGCACCCTTACATGTGTACTACCTTCTGACTGACCCCAGAGCGCAATGTAGGCAATGAAGGAAGGGGTGGGTGCATGCACATACACTCATGCGTTTGGTGAGTCCTGGCTGCCTGCTCTGACTTGGCCAGGCTTGCAGGTTATACAGGAAGAACAGTACCCCTGACTAGATGCCTGTAGTACACAGGGCCGGGTGCGGAAAGAGGCAGAGGTGGAGGTATTACATGACTTGGTCAAGTCCCCGC TCONS_00120773 TCONS_00120774 r 3' 7712 TCONS_00120773 TCONS_00120774 r 3' 9668 EMBV3_34827 TGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGGAGATTGGACTT Gene BVT0102_270821 - 1 EMBV3_26999 GK000011.2:79494240-80245327 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00178735 TCONS_00240375 TCONS_00149039 TCONS_00033207 TCONS_00148450 TCONS_00178732 TCONS_00149040 TCONS_00218950 TCONS_00149037 TCONS_00218953 TCONS_00206816 TCONS_00098202 TCONS_00117596 TCONS_00098200 TCONS_00167122 TCONS_00230834 TCONS_00162301 TCONS_00088420 TCONS_00206815 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00201119 TCONS_00050935 TCONS_00154285 TCONS_00098198 TCONS_00131536 TCONS_00185573 TCONS_00222139 TCONS_00178730 TCONS_00178729 TCONS_00161424 TCONS_00253351 TCONS_00233533 TCONS_00088422 TCONS_00218954 TCONS_00238290 TCONS_00106013 TCONS_00178733 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00106012 TCONS_00230355 TCONS_00222176 TCONS_00240373 TCONS_00223049 TCONS_00231769 TCONS_00157045 TCONS_00033186 TCONS_00054136 TCONS_00130054 TCONS_00207410 TCONS_00056187 TCONS_00011614 TCONS_00157046 TCONS_00063809 TCONS_00178734 TCONS_00158779 TCONS_00220551 TCONS_00162571 TCONS_00186835 TCONS_00142474 TCONS_00222177 TCONS_00218948 TCONS_00230354 TCONS_00142473 TCONS_00148446 TCONS_00207147 TCONS_00142472 TCONS_00129561 TCONS_00021875 TCONS_00207544 TCONS_00157807 TCONS_00231774 TCONS_00066112 TCONS_00011613 TCONS_00185570 TCONS_00176791 TCONS_00167922 TCONS_00186489 TCONS_00238284 TCONS_00230829 TCONS_00104289 TCONS_00157808 TCONS_00071703 TCONS_00185581 TCONS_00131535 TCONS_00238280 TCONS_00232767 TCONS_00178886 TCONS_00222184 TCONS_00031770 TCONS_00156869 TCONS_00249554 TCONS_00231772 TCONS_00162567 TCONS_00106011 TCONS_00106016 TCONS_00231775 TCONS_00033206 TCONS_00098201 TCONS_00107076 TCONS_00071451 TCONS_00158314 TCONS_00136035 TCONS_00186834 TCONS_00071397 TCONS_00154284 TCONS_00012044 TCONS_00072307 TCONS_00178731 TCONS_00131538 TCONS_00207543 TCONS_00063811 TCONS_00111146 TCONS_00212984 TCONS_00222175 116 XLOC_090921 XLOC_108508 XLOC_147039 XLOC_090916 XLOC_019441 XLOC_090330 XLOC_108505 XLOC_090917 XLOC_132269 XLOC_090914 XLOC_132272 XLOC_125336 XLOC_058448 XLOC_071762 XLOC_058446 XLOC_101958 XLOC_140324 XLOC_099183 XLOC_053207 XLOC_125335 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_122767 XLOC_031050 XLOC_094045 XLOC_058444 XLOC_080241 XLOC_111626 XLOC_135448 XLOC_108503 XLOC_108502 XLOC_098315 XLOC_156291 XLOC_143015 XLOC_053209 XLOC_132273 XLOC_144957 XLOC_062697 XLOC_108506 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_139845 XLOC_135485 XLOC_147037 XLOC_136355 XLOC_141257 XLOC_095505 XLOC_019420 XLOC_031945 XLOC_078765 XLOC_125926 XLOC_033990 XLOC_007165 XLOC_095506 XLOC_038535 XLOC_108507 XLOC_097231 XLOC_133868 XLOC_099452 XLOC_112886 XLOC_086899 XLOC_135486 XLOC_132267 XLOC_139844 XLOC_086898 XLOC_090326 XLOC_125665 XLOC_086897 XLOC_078274 XLOC_012548 XLOC_126059 XLOC_096262 XLOC_141262 XLOC_040830 XLOC_007164 XLOC_111623 XLOC_106565 XLOC_102758 XLOC_112541 XLOC_144951 XLOC_140319 XLOC_062346 XLOC_096263 XLOC_043473 XLOC_111634 XLOC_080240 XLOC_144947 XLOC_142251 XLOC_108659 XLOC_135493 XLOC_018015 XLOC_095329 XLOC_152497 XLOC_141260 XLOC_099448 XLOC_141263 XLOC_019440 XLOC_058447 XLOC_062987 XLOC_043222 XLOC_096768 XLOC_082254 XLOC_112885 XLOC_043168 XLOC_094044 XLOC_007594 XLOC_044076 XLOC_108504 XLOC_080243 XLOC_126058 XLOC_038537 XLOC_067046 XLOC_130301 XLOC_135484 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_30230 TTCCAGCTCTTCCAGTAGTAGCAGCACCAGCACAGACAGTAGTTCTGATGATGAACCACC Gene GeneID:515542|ZCCHC10:NM_001038545:65_cdna Constitutive 0 NULL GeneID:515542 7 GENE ZCCHC10 MGC133689 zinc finger, CCHC domain containing 10 EMBV3_40332 GGGCAGGGACCATGGCGGTGGAGTTAGAGGTGCCCCCACACCCCCCTCCTGCCGCTATCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32012 GGACCAACAGGAATTCCCTCCAAGTATTTTTAACAGTGTTCTTGCTTACCTTTGGAATCC Gene BVT0102_164082 + 0 NULL GK000020.2:16831259-16996170 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18740 CAACGTGGTTCCTATTCATGTTCCACCAACCACTGAAAACAAGCCAAAGGTGCAGTGCTG Gene GeneID:534708|RAB11A:NM_001038162:212_cdna Constitutive 0 NULL GeneID:534708 10 GENE RAB11A MGC133992 RAB11A, member RAS oncogene family EMBV3_23774 CTCAGCTTCATGGGAAAGGGCCCAGTGTACCAAGGAAATTGTGATTTTCAGGGCAAAGGC Gene GeneID:525895|UBN1:XM_002697953:653_cdna Constitutive 0 NULL GeneID:525895 25 GENE UBN1 NULL ubinuclein 1 EMBV3_11744 CTCTCAGTAGTCACTCGAAGCCCATGTATCAGCACCTTTGTCTAGAGTTCAGTATGAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35500 CCGTTTCGTAGAGCAGCTGGGCTCCTATGATCCAATGCCCAACAGTCATGGAGAGAAACT Gene GeneID:510899|MRPS16:NM_001075474:302_cdna Constitutive 0 NULL GeneID:510899 28 GENE MRPS16 MGC142647 MRP-S16 S16mt mitochondrial ribosomal protein S16 EMBV3_27644 TCTGTGACACTGCAGCCTCGGCTCATCTGTGGTGGGTGATGTTGATATGCTTCCTAGAAG Gene BVT0102_265254 - 1 EMBV3_04383 GK000004.2:104356480-104369614 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41143 TCTCCCACCTTGTCAAATATTGATGATCCGCTCGGTATGCTGGGATGCTCCAGTATCAGG Gene BVV0102_354965 + 0 NULL GK000005.2:115014123-115040172 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196654 1 XLOC_118400 Coding TCONS_00196654 XLOC_118400 Coding Coding PNPLA3 5:114959864-115014122 = TSS146286 8151 1 TCONS_00196654_3 531 0.568151147098516 13 0.850010136940856 5.89876291415044e-05 3.15153418752854e-05 3.29130043297627e-05 2.59624223173378e-05 2.20213274024594e-05 1.4496162216887e-06 9.48251118053323e-05 5.15896206190356e-06 5.54760148107161e-05 0.000235938474950753 0.00019441326777349 8.9349876479414e-05 7.67343864975346e-06 3.61392880773479e-05 3.63228777626609e-05 0.00744770511677906 0.00251913245768283 0.00257607319979578 4.42586817272491e-06 1.86109887723752e-05 3.89347427037933e-06 0.00220176912508276 0.00197643567127696 0.00261654031494228 1.4581504266532e-05 3.01650521480806e-05 2.37076584200379e-05 0.000388194564081781 0.000566336010450564 0.00064585302379113 XM_002687974.3 PNPLA3 PREDICTED: Bos taurus patatin-like phospholipase domain containing 3 (PNPLA3), mRNA. 0.0 3041 100.00 0.206723101459944 XM_005261754.1 PNPLA3 PREDICTED: Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), transcript variant X1, mRNA. 0.0 686 73.55 0.133480554533186 TCONS_00196654_3 sp|Q9NST1|PLPL3_HUMAN PLPL3_HUMAN Patatin-like phospholipase domain-containing protein 3; 2e-148 439 57.81 0.704331450094162 1 coding 0 0 1 1 -0.0266304558446969 0.849327696487349 0.0012879508776763 0.980163879338 ATGGCTGGCACCAAGGTGGGCTTGGCTGAAGGCTGTGGGGACTGGAGCCAGCTAGGGTGGCAATTGGAGGTGGAGTCATCGCTTCACAAGCCAGACCCTCCTGTTGTGAACATCAGCCTGAGGGAAGTGGTCACCTCCAGCACGGACCTGTCCTCACGTTGCTGCTCCACCCTCTGCCTTGTCCCGGAGGAGCTTGCCCTGCCATGGGGCTGGCACCTGATGTTCCAGAGCAAGGCTGGGCCTGCGCTGGGCACTGGGGACAAGATGTCCCAGCTCTGGAGCCTCGCCTCCTGGATGACATTTGGGGCCCGTGGGAGCCCCTCCACGCCCGAACCTGGGAACAGCCACTTGCATTACATCGCTTCAGGCACCTGGCCCTTCGGGAGAGACATGCTGATCGACTTCAGCGGTATTCTGCTCCATCTCATTGCTGTCATCGTACTCAACAACTGCCTCCAGCATGACCAGACGTTGCAGATCCTCATGGACCTCACCCGGAGCGCCAGAAGCCAGAAATTCGGGATCGTCCACCCAGGCTTCAGTTTGAGCAAGCACATCCGAGACGGTCTCCAGAGACACCTCCCTGACAACGTCCACCAGCTTGTCTCGGGCAAGATGGTCATCTCGCTTACCAGAGTGTCGGACGGAAAAAACGTGCTGGTGTCGGATTTTCATTCCAAAGACGAAGTCGTGGACGCCTTGTGTTGTTCCTCCTACGTCCCTTTCATCTGTGGCTGGATCCCCCCTTCCTTCAGAGGCGTGCGATATGTGGATGGAGGAATAAGTGATAACATACCCTTTGTTGATACCAAAAGGACCATCACTGTGTCCCCCTTCTATGGGGAGAGCGACATCTGCCCCAAAGTCAAGTCCACGTTCTTTCTTAACGAAGGATTCACCAAGCTCAATATGCAGTTCTGCACAGAGAACCTCTACCTGATGTTCCAGTCGCTGTTCCCACCAGATGTCAAGGTGCTTGGAGAGCTATGCCTTCAAGGATATGTGGACGCGCTCAGGTTCTTGGAGAAGAATGGCATCCGTGATGGGCCCCATCCGTGCCTGAGCGCGCCCCCCGCAGAGTCGGAGCCCAGGAGCCTGGAGCCTTTTCTGGGTGTGGCCCCCAGGGAGGCGGGGCCCAAGCCAGTGGAGCTGCTGGACCACTTGCATCTCAGCATGCTGACCTGGGACGAGAGCGTCCTGGAGACCCAGTCGCCCGAGCTCAGCATGGCACTGAGGAAGGCAGTCAGAAACCCAGATGGGTACAGAAACAGGATTTGCAACTTCTTACCAGTTAAGATCATGTCCTACGTGATGCTGCCCTGTACGCTGCCCGTGGAGTCTGCCATCGCTGTGGTCCAGAGACTGGTGACGTGGCTTCCAGACATGCCCAGCGACATCCAGTGGCTGTGGTCGGCCACCTCCCACGTGTGTTCTCAAGCCATGGTGCGTCTGCTCCCCGCTTCCAGATCCCAAATCCCAGCAAGCAGCCAACGGCCTTCCTCCACAAACCCGGACACTGTGGGCGTCGCTGGGCTCTCTGCTCCTCCGAGGACCTGGACACGCACCCTGTGGATGTCCTGCAGAGGCCAGAGCTGACAACTATGATGTCCGCAGAATGACCTGTGTGCTGAGTTTGTAGTGTCCTGAAACCAAAGGCAATCTTTCTAACAAAAAGCTAGGAAGCTACTCTTGGTGTGCGCGGTGGGTGCAGAGCTCAAGCATATCCAGGATATGAGTCTCTAAATATCGTTGGCTCGGTTGGGAAACTGCACAAGGGAGCCCGGCGTGGGGGCATCTGTGGCTGACTCCTCACCCTCTCAGCTGCCCCAGGGCACGTTCCTAGGGTGACTGGTGTTTGGATCAGGGACGTTGTGGCGGGGAGCTGGGCTGCCCTTTGTGCAGTCACAGTGGTTGGGGGGAAGGACTGTGGTCCCATCTCTCCATAGAGAAAGCAGCCAGTGTCGGGGAGGTGGGGTGCCATCCTCCCAAGGACACCCCTGGTTTCAGGGGGCATTCCGAGGTGGTAACTTACGTGAACTCTGGTACATCTTTCTGCTGCTGCTACTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACTAGGCTCTTCTGTCCCTGGATTCTCCAGGCAAGAATACTGGAATGTGCCGGGGTCCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACAGCGTAGGCGAAGATCAGGAAACAACTGCTTAATTAAACGTTAATTAAGGATATAAGGAGTAATAGAATAAGGATAGTTCAGTAGGAAATTCAGTGAAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTGAGAGAAAGAACGACATGGGGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAATAGTTTTTATACCTTAAGTTATGGATAATGGGGGAAGGGGTGGAGTCATGCAAGGACAGCAGCTCCTGGTCCTAAATGAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAAAAACTTATTTTTCTCTAAAGGTGATTGGTCAGGAGCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGTCACAGGAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTGTAACTACTCAAAAGAATCTGTGTTTAGACAGTTTAGAACATCTCCTGCCTCTCACAGTTGGGAGGCTTTGAACAATCACATGTGGCCAGAAAAACCTATTCAGGCAGGCTAGAGGATTTCCAAAGGAGTTTGTAGCTTAAACACTGTCACACCCAGGAATTATTAACTGGAGCTGCAAGCCAACTCCTCTCCCAGAGAGGTAGTGGGGGACAGCCCCCCGCAAAGTCAGAGGTGCAGGTGAAGGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATGGGGGACTCCTGAGGCTCAATCCCGCCTTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCATGGGCGGAGTTCCTCACGCTGGCTCCTGGCAGTGATAGAATTCCAGTTGAGCTATTCCAGATCCTGAAAGATGATGCTGTGGAAAGTGCTGCACTCAATATGCAATATGCCGGCTCCCGGCAGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAATCAGTCGTGCCCGACTCTTAGCGACCTCATGGACTGCAGCCTACCAGGATCCTCTGTCCATGGGATTTTCCAGGCAATAGTACTTACCTATCCTAAATATTTGGTGGAGTTATATTAAACATAACTCTCAGCAGGCACTGAGAGAGAGCATCAGAGGGCAGACAGATGGAAACCACAATCACAGACAACAGGCCAATCTGATCAAACGGACCACCCAAGACGGACGGGTCATGGTGGAGAGGTCTGACGGAATGTGGACGACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCTTGAACAGCATGAAAAGCCAAAAAGATAGGACACTGAAAGATGAACCCCCCAGGTTGGTAGGTCGCTGATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAAATGAAGTGATGGGGCCAAAGCAAAAACACCACCCAGTTGTGGATGGGACTGGTGACAGAAGCAAGGTCCGATGCTGGAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAGGAGATGACAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTCAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATAGCTTGGTAATCCAAGCCTATGTCCCAACCAGTAACAGTGAAGAAGCTGAAGTCGAACAATTCTATGAAGACCTACAAGACCTTCTAGAACTAACACCCCAAAATGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGCCAAAAGCTAATAGAGTTCTGCTAAGAGAACACACTGGTCATAGCAAACACTCTCTTCCAACAACACAAGAGAAGATTCTACACATAGACATCACCAGATGGTCAACACTGAAATCAGATTGATTCTATTCTTTGAAGCCAAAGATGGAGAAGGTATATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTCAAGAAAGTGGAGAAAACCATTCAGATATGACCTAAATCAAATCCCTTATGACTATACAGTGGAAGTGAGAAATAGATTTAAGGGACTAGATGTGATAGAGTGCCTGATGAACTATGGACGCAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATACAAAAAAGCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAACTGAAGTGAAAAGCAGAGGAGAAAAGGAAAGATATAAGCATCTGAATGCAGAGTTCCAAAGAATAGCACAGAGAGATAAGAAAACCTTCCTCAGAGATCATGCAAAGAAATAGAGGAAAACGATAGAATGGGAAAGACGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAATCTTCATGACCCAGATAATCACGATGGTGTGATCACTGACCTATAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTACGAACAAAGCTAGTGGAGGTGATAGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACCCAATATGCCAGCAAATTTGGAACACTCAGCAGTGGCCACAGGACTGGAAAGGTTCAGTTTTCACTCCAATCCCAAAGAAGAGCAATGCAAAGAATGCTCAAGCAAACCACACAGTTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCATGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAATATTCACTGGATCATGGAAAAAGCAAGAGAATTCCAGAAAAACATCTATTTCTGCTTTCTTGACTACGCCAAAGCCATTGACTGTGTGGATCACAATCAACTGTGGAAAATTCTGGAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCCGTATGCAGTTCAGGAAGCAATAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTACTTATTTAACTTATATGCAGAATACATCATGAAAAACGCTGGGCTGGAGGAAGCACAAGGTGGAATCAAGATTGCCAGGAGAAATATCAATAACTTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGGTCCCATCACTTCATTGCAAATACATGGGGAAATAGTGACTGACTTTATTCTTCTGGGCTTCAAAATCACTGCAGAATGGTGACTGCAGCCACCATCTGAAATTAAAAGATGAAATTCAAAGGTGCATACTCCTCGGAAGGAAAGTTATAACCAACCTAGACAGGATATTATAAAGCACAGAGACATTACTTTGCCAACAGAGGTTCATCTAGTCAAGACTATGGTTTTTCCAGTGGTCATGTGTGGATGTGAGAGTTAGAATATAAAGAATGCTGAGCACAGAAGAATTGATGCTTTTGAACTGTCCTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATCTATCCAGTCCATCCTAAAGGAGATCAGTCCTGAATTTTCATTGTAAGGACTAATGTTGAAGCTGAAACTCCCAATACTTTGGCCACCTGATGTGAAGAGTTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAAAAGTGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTAATTGACAGAGGCCTACATGCTACAGTTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTTATATTAAACAAAGGATTCTTAAAATCTCTTGAATTATCTATTATGAGGATCAAGAAAACATTCAGAGAATAAGTCTTGAAAATAGAAATCCAGTGCATAAGACAGTCACCCTGGCACCTGCCCCCGCACCCCTCCCCCGCGAGCTCTAATGGAGACGAGCAGGAGGCAGGCACGCACCGTCTCTCCAGGGTGGTAATCTGTTGGCAGGCACAGATTACATGGGCCCACTGCCCGTGTAATATGACCCAAGGAGCAATGTGGCGTGCGTTTTGCTTATTTATGCATTTGAGGATACCAAAAAGGAAAGGAACAATCAGCTCAAATCCTACTTCTGGGCGTGCAAAGTCACAGCTCTCACCCACATCGTGTAGGTGTCCTGGAGCCGAAGAACCAGCAGGGCCAGACAGAGCACCGCACCGTGAGGGCAGCAGGCAGGGACTGCCTGTGAAAACACAGGGTCGGCTCGCAGTGCAGGGAAGTGCCCCATGGGGGCTCCTGGCTGGCTCCTCACATTTCTGGGGTCTCCTGTGCTGGTAACCCTCACTTCCCGAGTGAGGCAAGGCTGAGTGGTGGGCTCTCTGGCCACCTGGGCCCCAGGTCAAAGCACTGTCCCCTTGCTGAGCTGACCTGGACTCCTGGTGACACCCTCACACCTTCCCTGAGCCCGGTGCTCGGGGTCCCAGTGGCCTTCTCTGCCAGAACCATCGCCCGGGTCTTAACACATGCAACCCCACCTTAGCAGCATCTTACAGTAACCAAGACACTTTCATTTATATAGTATTCTCTGCACTGGTTCTGACGTCATCGTAGGGAAAAAGATGTGTTAAGATAGGATTACATGGGACTTATTTTCTTACTGTCTGTGATTATTCCATCTTCTTACGATCAGCATGTGTTTTATTAATTCGTTTCAAACGTGCAGTAACACGAGGAAGTGTATTACTGTTTCTTAGGAATATCCCGGGTTCCGCCTCACTGGTGCCTTGTCTCCTCATTGGCTGACCCAGGCCTCCCCCCGACATCCTCACCGCCCCCCAGGCCCTCACCTCTCCAGCACTGCGGGTTTCTCATCAGCGTGTAAAACATTCTCAAGTTTCTCCCACCTTGTCAAATATTGATGATCCGCTCGGTATGCGGGGATGCTCCAGTATCAGGAATCATTGGTGTGCAGTGTGATTCATGCCAGGGAGCAACCGTCTGTTTGGTAAACAGATAGCAGAGCCTGCTGAGAAGCATGAGCCCAGTCTTGCTAAGGAAATAAAATGTGTGTGTAGAGTGGACACTGAAAGACTGTTTGCCCGGTTACCGACGGTGGTTACCATGATGCCGTCCCCTGTAATTACATTTTATATTAAATTTCTGCGTTCATCACGATATAATTCATAACAA EMBV3_35735 TGTGCCTACTTCCTTTAGCTACCTCACTTCTCTTGCCCCACGACAGGTACCCACCCAAAA Gene GeneID:100336255|LOC100336255:XM_002690384:2_cdna Constitutive 0 NULL GeneID:100336255 9 GENE LOC100336255 NULL hypothetical protein LOC100336255 EMBV3_19571 GACAAAGCTGCTGAGGAAGTTAAGCATCTTAAGACCAAGCCAGCAGATGAGGAGATGCTG Gene GeneID:768330|DBI:NM_001113321:29_cdna Constitutive 1 NULL GeneID:768330 2 GENE DBI MGC140115 diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein) EMBV3_30196 CCTGGAGGGGGCCTCGGAGCGCACGGGAAGGTCCCACACCAGCCAGCAGCTTCCTGCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38081 GATAAGTGGAACATAGCTTGATATTCATGTACTATCCACAACTAGTCTGGCCTTGTCAGT Gene GeneID:517797|SLC33A1:NM_001075758:130_cdna Constitutive 0 NULL GeneID:517797 1 GENE SLC33A1 MGC140665 solute carrier family 33 (acetyl-CoA transporter), member 1 EMBV3_01343 CGGTCTCCGTTCCGCCCTTTCGGGAAGCAGAGGGATGGATTCGTTCAATCCGCTCCCAGA Variant GeneID:504824|NARS2:NM_001098867:10_cdna 108^424 1 EMBV3_37592 GeneID:504824 29 GENE NARS2 MGC152259 asparaginyl-tRNA synthetase 2, mitochondrial (putative) EMBV3_38722 CCTCGGCAGTGTCCACGCAGAACTACATTTCCCAGAGTCCCACTCGCTTTAGAACTACAT Gene GeneID:784914|ZNF26:XM_002694427:132_cdna Constitutive 0 NULL GeneID:784914 17 GENE ZNF26 NULL zinc finger protein 26 EMBV3_15839 TGGAAGAGGAGGAGCAGGCCATGTATGAAATGGTGAAGAAGATCATAGACGTGGTCCAGG Gene GeneID:518023|LEMD2:XM_002697182:229_cdna UTR3_Alt 2 NULL GeneID:518023 23 GENE LEMD2 NULL LEM domain containing 2 EMBV3_18312 CTGTAAGATAGTCAGCATACTTGGCTCTCACATACTAAATGCCAGTAGCGCCCTCTCCCC Gene GeneID:614589|ZC3HAV1:XM_002686998:862_cdna UTR3_Alt 2 NULL GeneID:614589 4 GENE ZC3HAV1 NULL zinc finger CCCH-type, antiviral 1 EMBV3_11388 ATTATGACCCATCGCCTGTGTGTGTTGTTAGTGGTCTTCTGCTGGGTAGGTGGCTTTCTC Gene GeneID:614591|LOC614591:XM_002690670:247_cdna Constitutive 0 NULL GeneID:614591 10 GENE LOC614591 NULL similar to Olfr736 protein EMBV3_36871 CTACCAGCAGCCCTTTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGA Gene GeneID:281987|PLCG1:NM_174425:730_cdna Constitutive 0 NULL GeneID:281987 13 GENE PLCG1 NULL phospholipase C, gamma 1 EMBV3_22647 TGACGGTAACTCAGGTCACTCAGTCAGTAATCAACGTGAGCTGGACTATTGGGACTGGGG Gene GeneID:100299981|FNDC7:XM_002686193:417_cdna Constitutive 0 NULL GeneID:100299981 3 GENE FNDC7 NULL fibronectin type III domain containing 7 EMBV3_29015 GGCAAACGACCGGGCCGCCACGGGCATGGTGGACCCAGCTCGGCTGAACGAATCTACCAC Variant GeneID:505524|DNTTIP1:NM_001098876:877_cdna 598^645 2 EMBV3_30116 GeneID:505524 13 GENE DNTTIP1 MGC166131 deoxynucleotidyltransferase, terminal, interacting protein 1 EMBV3_14504 CCATCTTCTCTGACCATGGACTCAATCCACATCCCAGCATGTCTCAATCTGGAGTTCCTC Gene GeneID:514078|LOC514078:XM_002697821:473_cdna Constitutive 0 NULL GeneID:514078 24 GENE LOC514078 NULL similar to Myosin-Vb EMBV3_04829 CAGTAGCACAACTGGTTGAATGATTACATCTGCTAGGTGGTTAGCATGCCTGTGTGGCCC Gene BVT0102_078034 + 0 NULL GK000003.2:27035617-27300170 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172675 TCONS_00172674 TCONS_00172679 TCONS_00172680 TCONS_00172677 TCONS_00172676 TCONS_00172678 1 XLOC_104191 Coding TCONS_00172676 XLOC_104191 Coding Coding MAB21L3 3:27296832-27365628 j TSS128556 4737 1 TCONS_00172676_1 349 0.132151150517205 8 0.931259539210698 5.05891591936702e-14 5.99004321270866e-11 0 0 5.24302663757077e-11 2.58631331520245e-210 0 3.7072483572797e-14 8.23718317210545e-11 1.74531065419624e-11 4.2827511780777e-06 4.16758347214541e-11 0 8.84342788014126e-18 4.45676484176251e-12 0.00994267566461077 8.5510341096479e-10 0.00402853675579959 0 1.48474456434808e-17 0 0.00165483178149365 0.000674946436869371 0.00174580847303639 1.38087819708071e-12 1.05575116220637e-10 6.07967167297123e-24 1.67193333790303e-06 1.77860948506517e-13 5.32203646651982e-05 XM_596791.6 MAB21L3 PREDICTED: Bos taurus mab-21-like 3 (C. elegans) (MAB21L3), 0.0 7310 99.98 0.85623812539582 NM_152367.2 MAB21L3 Homo sapiens mab-21-like 3 (C. elegans) (MAB21L3), mRNA. 0.0 1876 74.92 0.602279924002533 TCONS_00172676_1 sp|Q8N8X9|MB213_HUMAN MB213_HUMAN Protein mab-21-like 3; 0.0 552 78.74 0.948424068767908 1 coding 1 0 1 1 -0.0434116820074331 0.691590449943987 0.0192339235242122 0.8137478707507 CAGATCTTCTCTCTTTCCCTTTTGGAAGCAGCTTGGAAGGCCTCAGCCAGCCAGGTTGGGAATTTGCTGCTTGAGCTGTTTTCCAACACGGATTTGCTGGCAAAACCAGATATAAAAGACGGATGCTCACAATTTGGAAATAAGAACTTGAATGAAGAATTGAGAGGGTAAGTCTCTGGTCCACACACACATTTCCAGAGAAACTCAGCCCCCAGATATTAACATCTCTGGGAAAGCCACACAACAAGCACGGTCTCCAATGACAGACAAACTGAGACGCTGCTGTTCTGCTCAGGATTGACCAGGAAGCCGTGAAATCCCGGATGGAAGGAGACTTAGAAAATTGCCTGCTGAATAAGGTGGACTTGAGGCGCCAGTGGATTTCCCAGATGGTGGAAGAGGTGCAGAAAGTTGTCCATCACCTGACCACAGAAATAAGCTACCAAGACTTTCGATTTCAAGCCATCCCTTACTGTGACACGTACAATGAGAACATTAAGGTCTTGGCTCCCACCCAGTTCCTCATCACAGTCCCGATGAGAGGCCTGGCCGGGTACAGGGAGGCCCGGCAGCAGCGCTGGCGCTTCTACAGCCTGAAGGGCACCCGTCTGCCCCGCCCCCTGCAGGACCCAGAGGGCCTGCAGCAGTGGCTGGGGGTGGAGCAGTTTCTGAAGAGCCCCGGGCAGTGGCACGAGGCAGACGTGAACATCGAGGGAGACATTGTGCCCGCCAAGGTCCTCCAGGTGTTCCGGAAACTGGTTGAAAACGCGATTGAGACCTGTCACCTGTCAGGTGAGGTCCGCATGCTAATGGACCACCTTGTAGTTCGAGTTGTCGTGGAAACCTCTGCAGGTCAGGTGGAACTACAGCTGACCCCCTCAGTGGACATCCCCACCGCCTGGTCCAAGAAAGCCCAGTGGCCTTCGTGTCTGAAGCGCTGGCCTTCTCCAGAGACAGTGCAGTGCATCAAGTCATTCGGGTTCAGCTTGCTGGCCTGTTCAAGCTATCACTGGCAGCTGAGCTTCTTGCGGGCAGAGCAGGTGCTGCTGGAGCAGCTGGATGAGGACGGGGGCTGCCGCCGGAAGTGCTTTCAGGCCCTGAGGCAGATGAAGGAGGACGTCTGGTGTCCGGGGACGCGGCCTGTGATCACGTCCTACCATCTGCAGACCGTGCTCTTCTGGACTTGTGAGAAGTACCCCTATCCCAAGGACTGGCAAGTCTTCAGCAGGGGGTTCCTGCGCCTGGTGAGGAAGCTGCACAAGTGTGTGAGTCAGCGCTTCCTCAAGCATTACTTCGTGCGGAAGAGCACCTCCTGCAGTATGCCAGTTCCTGCGAGCTGGACGCCCTGGCCCAGACGTTGGCCTTCTTCCTGAAGGACCCCCAGATCAGCCTGCCCTGATGCTGCCTGGCCTAGGACATTCTTGGACATTTTATTCAAGTTTGACCTCACTCTCCGTGGATGGTTCCTCAGTCAAATGCCAGGATCCTGTCTGGGAGAGAAGCCACAGATGGCAGTGGAAATTACATCTACCCAGCAGCATTTCAGCAGGGGAACTTCTGCCCCATGATGTCTGGTCCACGCTCCCTGCAACCAAGCAAGCCTTTCTGCCCCACTAGCTACCTCTTCTGGGGATGGCTCTCATCGGGCTTCCCTGAGCCATAGATTCTGAACTGATGATGGTTCTGAATTTATTTTCCCTGTCTCAGGCTCTGATTGTCTGACAGGGAGGATGTAGAATGAGAACCCCTGAAAGGCCAGGCATCATCCTGCTTCCCAGGAGTGGTTCTCCAGCCCACTGAGCACAGGCTCATGATTTTCCATTTGTTAAATGGGACTATCCCTTTGCCTCCCCCAGGGCAGGGCTGCGAGCCTTCGGGACTGTGCTGCTGCCCTTTCAAGGGGAAGGCGCTGGATCAACACAACGTTTATTGTTGCTTTAGTGGCTGGGGTTCGCATTCAGGATCAGTAGCACAACTGGTTGAATGATTACATCTGCTAGGTGGTTAGCATGCCTGTGTGGCCCCTGTGCCCTCCAGTTCTCCTTATGCTGGCTGGAGCTTGTGGGTCTCCCTGGTCCCCTGGTGTTCTCTAAGAAAGGGAGCATGGTTTTGATGAGTAATGGAGTCGAAGGTGGAAGTGCAGTGATCCTGGTGCTGGCTTCCCATGCTGTGGGTCAGGGGTGGGACTTCTACTTATGGAAGGAACTCAATGCTGTGATCTGCATGGAATGACTTTGGTGTCACCCCCTCTCTCAGTTTCTTCCTTTGCTTTACTTGGTTTGCTTACTTGTTCACTGATAAATATACGTTCATTAGGTACTGGGGATGCAGTGAAAGCAAGGTAGACAAGGACTCACCTGATGCAGATGACACCTAATGGTAGAGACAGGAAATGAACACCTGAAATAAATATGATTATTGCAAATGCCCCAAAGGAAATAAACAGAATACTGAAATAGAGCCATGAAATAGAGGGTGAAATTGCGAACAACTGAAAGGGAAGAAAGGGGGCCAGGGGTTGGCATAAATCAGATCACTTGGCCTTGTAAAGCTGGTAAGGAATTTGTTTTTTACTCTAAAATCAGAGGTGTGACATTTGACCTCTCCAGAAGCAAAAGGTATCATGACTTGATTTGCATTTTAAATGTTCATTCTAGAAACTGTATAAAGGGGGTCTGGGGACCCACACTAGGATGGGGACCCTGAAGACACTTGAGCCCACGTATTTGAATTTCACTGAGATCATCAAGGCCACACGTCCTGTGAAGCACACAGAGAAGGAATTCTAGGAGTTCTTGGGGGATTCAGTTTCTTCTGAAACTCATTTATGCTTCTCAATTCAAGGGAATCCCTTATTACTTAGAACATTTCCCCCAGATATATAATCTCTAAAAGCATGAACTGCTGATTTTTTTTAAAAGAAAAGTCATGTTTGAAAATGGTACAATTATTTTTACAAAAATGCTGTAAGCAAGCATGGGGTCCTTGCATTGTCACATTGGAAATCATGGTTTTAAAATATTGAACAAGCATACCATTAATTTATAGTTTTGAAAAACATGAAATTATGAGCAAACCAATATTTTGTTGGTTATTTTGCATTCAAATTCTCATATTCTTGAGAAACATCATTTTTGAGAAGGTGGCAGATATATTTTTCTAATGATGAAAACAGCTGATGGCAAGTTTTAAAACAGTCACAGAATTCCAAAAAGTGAAAGTTGATTGTACCATTGAACTGAAGTGTATGTATGTGTATGGAAAGGAATGGGACTGACATACTCCACAGCCTGATTCCAGGAGATAATTCCCACCTTTCTCTACAGTTTGTGGTTTTTTTTGAAGAAAGTACAACTATGTGCACATTCCTGGGAGTTCCTACTACTGGCCAGCAGAGGGCAGTGGGGGACTGCATATGAAAAGAGCCAGGTTCCCACCCATACAGCGCAGAGCCCAGCAGGTGTCGCTCCTCTCAGCCCATAGTTTAAACTGGCCTCTGCAAAAAGGGAACCAAGGGGCGAGGACTTCAGCTGATGCTGAATTGTTCTTTTCCTGCCATTTTGGCCAAAAAATTACCATCTTTCTGGTTAAAGCTCAAACTTAGCAACGGACTCTATGAGAGGATCGTTCATCTATTCCATTTCCTTGGATAGATTACACAGCTCTGAGAAATCTCACAATATTACTCTTTTATTCAGGTCAGATTTTTTTTTTTTTTAATTCTCCCAAACCCCTTTTTCATTCATCTCCACTCTTCAGGCGTCCCCCAACTATTTTTTTAGTGGAATGGTTGGCATTCAGAGATTGCAGTTGATTTGCTTGCATTCATATCCCACTTCTGAAACTAACTGCATGCCCTTGGCAAGCTGTTCAACCTCTCTAAATCTCCATTACTTTATGGGCAATGTTATGGGCTGGATTGTGTCCTCCCAAAATTCCTATGTTGGAGCCCTAACCCCCAATACATCCGAATGCGACTGTATTTAGAGCTAGGGGCTGTTAGGGTGGGGTCCTAATCCAATAAGACTGATGTTCTTAGAAGAAGAGACGCAGTGGACGGGGTGCAAAAAATGACCGCCCGAAAATTGAGGAGCAGCCTCAGGAGAAACCAGCAATGCTGGCACCTGGATCTTGTACTTATAGCCTCCAGACTGCGAGAAAACAGTTTTCTGTTGTTTAAGCTATGCTGTGTAAGTCTGTGATGTCTTGTTATGGTGATCCTGGGAAACTAATACATCATAAGAGAACATATACCTCACCACTTTGATGGGGGGATAAAGAGAACGATGGATGTAAAAAGCTGTTTGTTTAAAGCTGGCATGTAACCATTGAATAAACGTTTAGCATTTTAGATGCCTATTCCTCAAGTCTATTTGTGCACCTCTGCCATTCCTGATAACTGCTGCCACCCCACAGATAAATTCTTCATTGAGAAATTAGAAATCATCACAAGGAAAACATACCCATAACACTCCACATGTTCCCTAAGCCCATCTTTTCCTTCGTTACTCTTGCTACAGTATAGGAAGAAAGATCTCTCCTGATGTCTCCATGTGTGATGGGCTGAAGCCTCCTAGCATCTTGGGGTCATTGTCCCATGTCTTTCTTGTGGCGTCCTCTGCACCTCCCGTGATCATCACCTGCATCTCTTCTCCCCTTTCTCTCTCCAGCTTCCTCAATTATACATGTGTCTCCATTTCCTTACTTCTTCATACTTTTTAAATTGTGAAAAATATC EMBV3_42992 GATACAGTAGTGAAGCATCAGTAGATGAAGGATGTGTCAGCTCAAGGATCGTCTTCACAG Variant GeneID:787880|SYT14:XM_002694296:387_cdna 500^771 1 EMBV3_30851 GeneID:787880 16 GENE SYT14 NULL synaptotagmin XIV EMBV3_39826 TTACCTGATAACGTGCAGAAGGCAGAGCTAAGCGATGGCAAAAGTACTGAGCCAGTGGGC Gene BVV0102_273959 + 1 EMBV3_08272 GK000009.2:25692871-25873434 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236847 TCONS_00236848 1 XLOC_144586 Coding TCONS_00236847 XLOC_144586 Coding Coding NCOA7 9:25681082-25781387 j TSS177209 4929 1 TCONS_00236847_10 895 0.00730371272063299 15 0.951008932844154 7.70642112349966e-05 0.00012735990650355 3.35848819356924e-08 4.36771209170936e-05 1.85995698486374e-08 4.05448435956273e-09 1.39865323614072e-05 2.63672429367088e-09 5.13665968841273e-09 0.000102222876165876 0.000157833645552489 6.65677229825687e-05 1.74833760514205e-05 6.41361539408255e-06 2.897881759431e-06 0.000240891241622336 2.4830653896942e-22 0.000533951088267935 6.56880351405929e-09 9.11830824807789e-27 2.08885360907966e-07 1.22759784334679e-07 3.2928919060889e-05 0.000193798947516787 6.24809596179647e-09 1.31853806696799e-08 6.09760711571375e-12 4.10094595803495e-05 3.37462672708344e-05 2.18558119202053e-08 XM_005199357.1 NCOA7 PREDICTED: Bos taurus nuclear receptor coactivator 7 (NCOA7), 0.0 8561 100.00 0.962872793670116 NM_001122842.2 NCOA7 Homo sapiens nuclear receptor coactivator 7 (NCOA7), transcript 0.0 4672 85.75 0.804828565631974 TCONS_00236847_10 sp|Q8NI08|NCOA7_HUMAN NCOA7_HUMAN Nuclear receptor coactivator 7; 0.0 1552 87.03 0.998882681564246 0 coding 0 0 0 0 0.0520217605303459 0.754272469957629 0.00804082183726768 0.859586993292803 AGGAGAGTTGACTACAGAGGGAGATTTGACTGCAGAGAAGAATGTGGTGTGACAGTGAAACCATATACCGCACTGTTGGCTTTGAAGATGGAAGAAAGCAGCTCTTGCTGCTGGAAAAGGCAAGGGAAGAGAGTCTGCAGGGAGTGTGTGACTGATTTTGGACTTCTGACCTCCGGAACTATTGAAAAAGAAAAAGCAAGCCAAACAAAATGCAGAGACAGCCTCAGCTATGGCTGCAAGGACTCATTCTGGAAAAGAAGATGCCAGTAAAGTCATTTTAGAGCAAGACAAGTGCAACATTGCTGTGGAAGAGGAGTACATTACTGATGAGAAAAAGAAGAGAAAAAGTAATCAGTTAAAGGAGATCAGGCGTACAGAACTAAAGAGATATTATAGTATTGATGACAATCCAAACAAAACACATGATAAAAAAGAGAAGAAGATGGTGGTTCAGAAGCCCCATGGTACTATGGAATACACTGCTGGAAGCCAGGACACCCTAAACTCCATAGCACTGAAATTTAACATCACTCCCAATAAATTAGTGGAACTGAATAAGCTTTTCACGCATACTATTGTTCCAGGCCAGGTTCTCTTTGTGCCAGATGCCAACTTTCCCTCGAGTACCTTAAGGTTATCATCATCCAGCCCTGGTGCTACTGTCTCTCCTTCATCATCAGATGCAGAATACGATAAACTGCCTGATGCTGACTTAGCAAGAAAGGCCTTAAAACCCATCGAGAGAGTCTTATCATCCACTTCGGAAGAGGATGAGCCAGGAGTGGTAAAATTTTTGAAAATGAATTGCCGGTACTTCACTGATGGAAAGGGTGTGGTCGGAGGCGTCATGATTGTCACTCCTAACAACATCATGTTCGACCCTCACAAGTCCGATCCCCTGGTCATTGAAAATGGGTGTGAGGAATACGGCCTCATCTGCCCCATGGAAGAGGTTGTTTCCATCGCCCTCTACAATGATATCTCCCACATGAAGATCAAAGATGCCTTGCCATCGCCTGGAGAATGGGAAGACCTGGCTTCAGAAAAGGATATCAACCCATTCAGTAAGTTCAAATCTCTCAACAAAGAAAAACGGCAGCAGATCGGAGAGAGAACCATCACTTCGGATTCCACATCGACAGGACCTTCAGAGAAGTCGACGGAATACATAGAAACAAAGCCCTCAGACAGCTCTGTGTCCGACAGGGTAAAGAAACTGGAATCCTCTGCAGAGGCAACCCAGCAATCTACCCCAGTAGCTAACGTCAGCAAGGAGCCTTCTGACACTGCGTTTGAATCTATAGCCAAAGAAAATTCTCTTTTAGGGGAAGATGATGACTTCGTTGACTTGGAAGAGCTTTCTTCTCAAACTAAAGGTGGAATGGACAAAAGAGACACCTCAAAGGAGTGCCTTTCTCTTGACCCAGAGGAACTAAGGAAGACTAAATCACGAGTAAGCAGTTCTACTACGGAAATTCAGTCAGCCCTGAACTTTTCGGGAACAGAGTGTGATGCTGAACTGAAGGGAGCCCTAGACTTAAAAACCTGTGAGAAACAAGATATAATGCCAGAGGTGGACAAGCAGTCTGGGTCCCCAGAAAGCCAGGTGGAAAACACGCTGAACATACATGAAGATCTAGATAAAGTCAAACTCATTGAATATTACCTTAATAAGAACAAAGAAGGGTCACAGTTACCTGATAACGTGCAGAAGGCAGAGCTAAGCGATGGCAAAAGTACTGAGCCAGTGGGCATAGACATTACCCTTAGTAGTTCTCTTCCCCAGACAGGTGATCCCCCGACTGAGGGCAAGGAAGAGCCAGATAAAACCTGGGCGAAAGCGAGAGCACCCCTTCCGTTGCAACTGAGCTCCTCTACAGAAGAAAGTATGAATAAAGAGTATCCACACTCCTCTTTGGAATCTACTCTGGACAACAGCTGCCAAGGTGCACAAATGGATAATAAATCTGAAATTCAGTTATGGCTATTAAAGAAAATTCAGGTACCCATTGAAGATATACTTCCTTCAAAAGAAGAGAAAAGCAAAACTCCACCCATGTTTCTATGCATTAAAGTGGGAAAACCGATGAGGAAATCCTTTGCCACTCACACAACAGCCATGGTTCAGCAGTATGGCAAACGAAGAAAGCAACCGGAGTACTGGTTTGCGGTTCCTCGGGAGAGGGTGGATCACTTGTATACGTTCTTTGTCCAATGGTCTCCTGACGTCTATGGGAAAGATGCCAAAGAGCAAGGCTTTGTGGTGGTGGAGAAAGAAGAACTGAATATGATTGACAACTTCTTCAGTGAGCCAACCACCAAGAGCTGGGAGATCATCACGGTCGAGGAGGCAAAACGCAGGAAGAGCACGTGCAGCTACTACGAAGATGAGGACGAGGCCGCCCTGCCGACCCTGCAGCCCCACAGCGCACTTCTGGAGAACATGCACATCGAGCAGCTGGCCCGACGCCTTCCAGCAAGGGTGCAGGGCTATCCATGGAGACTCGCGTACAGCACACTAGAGCATGGGACCAGCTTGAAAACTCTCTACCGGAAGTCAGCAGCACTAGACAGTCCTGTACTATTGGTCATCAAAGACATGGATAATCAGATCTTTGGAGCATATGCGACTCATCCTTTCAAGTTCAGTGATCACTATTATGGCACAGGCGAAACTTTTCTCTACACATTTAGCCCCCATTTCAAGGTCTTTAAGTGGAGTGGAGAAAACTCATACTTTATCAATGGAGACATAAGTTCTTTGGAACTTGGTGGTGGAGGGGGACGATTTGGCTTATGGTTAGATGCCGACTTATACCATGGACGAAGCAACTCCTGCAGCACTTTTAATAATGATATTCTTTCCAAAAAGGAAGACTTCATAGTTCAAGACCTCGAGGTATGGACATTCGAGTGAAATTTAGACTGCCTTAAAATAGAACATTTAAAAAGACTGGGTTCGGTCAGCCCTGCTAAAGCTAGCTGGAAGACGAAGCCCCAGCTCAGACTGCCTCATCCCATCATAGTGCTTTCTTTCTGCCATCATCTCAGAGCGCAATTACATTGCAGAGAGATTCTGAAAGGTACATGTGGAAGGCAGACGATGAAGAAAGAAATTGAAGTTCGGATCGTTGAAAGACTTTATACTCTCACTTTCTTCAAACCCATAGAGTGAGGAGTCAGAATATTTATAGATGTGAGTTGAATGCAATTTTTATTTTTGGTAACTGTGAAAAAGAAAATACTGTAGAAGTATATACATTCCTTGTATATTTATCAACATAATTTTCATTACCAAAATGTACAGCATACTATTGTTTGCCATTGAAAAGTTTAGTCTCATTTAGAAAAATTGAAAGTGCACAGCACTTAAAGGGAATAAATGATTTTTTAAAACTGTTTTATTTATTATTTCTAGTATATTATTTGAAATGTGTTGGCAATTTTTTTCTTTTAATGTGTCAAATCTTGAAGTAAAGAAATGTATACATTTTGTGCTGTTTTGGCAACAAATCCATTTGATTTATATAGTTTTATATTAAATTTTTTTTGCCCTGATTGTTTAGGGTGATCTGTATATGTATGTGCTGCTTAATGTCCATATATATACACACACATATATATATACACAAACACAATTCTGAATTTTTAAAAACTCATAATCAATGTTTATTGATTTGACTGTTGTAGGCCATCTTTCCATTTTGTCATTGAAAAGGTACATTTTTAGTTATTTACCCTGAACATAATTGTGTAAAGAAGAATAAGCCATTTCTCACAGTCATAAATTGATATTTACAGTAATGTATACTTTTATGATCCTGGATTTAGAACCCTGCTGTTGAAAAGAAATGTTTTGCTTCTTATAAAATCTCTTGTGTTAGTAACAGAAATTGTATTTTTATTGGATTTTTTGCATAATTTTCCCCAAGTTTTTACATTAACAGGCCTCTGTTTTAAATGAGACTGAATGTTTTAATTTCTGTATATTTTATATCAAATGAAAAGTGTCCATTATCCCAATTGTCTTGGTTTCTACACTCTTTTATTTGAAAAAAATTAAATGCAAAGAAATGCATTTATACCACAATTGGAATAAAAAGTAAAAAGCAGTTTTTAAATATCAACTCACTTTCATATCATTAAACATTCTTTTATGAAAGTTAATAATAAAACCTTGTTAAAATTTTAACAAATATTATTGATTGTCAAACTTTTACAAAAGCCAAAGACTGCTAATGGAAAAAAATGTCAAGTAATAGCCAAAGCTGAGAAAGTTGTCTGTCATCAATTACATTTCCAGTGATCTTTGAAAGGAAAAATTAATAGAAAGTAGTAGTTGATAGACCTGCATTTTAAACATGTAAACAGTGCTTAGAATGTTGGCTTTAAGCTGGCGGAATACTTCCTCTAGCTTATTCTCTTACTTTAGACTATTTATAAAAGAGAACAAACAAATTGCTATGTGGCCTCCTGTCAGATCAACCATTATTTTACTCCACTCACATCCCATACAAGTTTCTTTGAATGCTATAAAATCTTAAATCTGTAGCCTGGGTGTACTTTCACCCAAGTTCTATTGCAAACTCGTCATTAACAACTTATCGGCAGTTGAACCTTATTAATCTGCTTGTTATATAATGTGCCTGTGTGAGATTCCAGGAATGTCTCAGTATGATCACATTTACCATTTATGCCATTTGCAACCATATGCTATTAACAAAATGGTCATTTTGCATATAGTTCACTCTTACCTAGTTTAGTCCATGATATTATACTTGTGAGAGCATATTCAGATGCTGTGTTCTCTATTTAAAACAGTATTGTCCAATCAGACATGCGTGGCCCTTCATTTATGGATACTGAGTGTATGTAATGCAGTGCTAGCCCAATATTTTCAATAAAGGAATTCATGCATTCAATGTGATT EMBV3_36442 CTGGTTTTTCGTGGCTTTCTTCTGGTGGCTATTGGGAGGCAGTTCAGCAATGTGTGTTGG Gene GeneID:614730|NICN1:NM_001034767:280_cdna Constitutive 0 NULL GeneID:614730 22 GENE NICN1 MGC128436 nicolin 1 EMBV3_23581 CCAGAGACCTGGCAGAACCTGTGTTCACTGATCTTTTTCATCCCCACTACACTGCATTAA Gene BVV0102_024981 + 0 NULL GK000017.2:19171816-19435288 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25783 TAACGATGGTGGTATGTGTAGAAGCACCACTTTCCTGGGGTCTGATGGTGGTCGAGGACA Gene GeneID:507486|SHQ1:NM_001035049:17_cdna Constitutive 0 NULL GeneID:507486 22 GENE SHQ1 MGC128743 SHQ1 homolog (S. cerevisiae) EMBV3_31521 CCCCACCCTTCAGCCTGTCGCAGAGAGTATCTGTTTGAGTTCTCTGAGTCATACAGCAAA Gene BVV0102_346231 + 0 NULL GK000023.2:28311313-28330033 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136959 1 XLOC_083169 NonCoding TCONS_00136959 XLOC_083169 NonCoding NonCoding - 23:28314683-28316614 - TSS102249 1931 2 TCONS_00136959_2 90 0.847229414810979 1 0 0 0 9.58467398666192e-06 0 0 0 0 0.000122521323520269 3.26882285060645e-05 4.26151863156703e-06 2.37098400350589e-06 0.000116658641102988 0 0 0 0.00250472706537698 0.000490072665157195 0.000578223186935112 0 0 0 0.000643688728131259 0.000237546097708676 0.0010591844435955 3.58803112021486e-06 0 6.37194446753497e-05 4.47677341975085e-05 5.55601956793879e-05 2.49082871635049e-05 XM_001788594.4 LOC538808 PREDICTED: Bos taurus kinesin family member 7-like (LOC538808), 3e-131 473 89.34 0.179181771103055 NM_007211.4 RASSF8 Homo sapiens Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 (RASSF8), transcript variant 4, mRNA. 5e-14 84.2 75.56 0.0688762299326774 0 noncoding 0 0 0 0 0.718919004291311 0.00328867009437952 -0.162386666804317 0.127744428226392 GTGTACTAGACAGCAAAAGAGACACTGATGTATAGATCAGTCTTATGGACTCTGTGGGAGAGGGAGAGGGTGGGGAGATTTGGGAGAATGGCATTGAAACATGTATAGTATCATGTATGAAACGAGTCGCCACTCCAGGTTCGATGCACCATACTGGATGCTTGGGGCTAGTGCACTGGGACGACCCAGAGGGAGGGTATGGGGAGGGAGGAGGGTGGAGGGTGGAGGGAGGAGGGTTCAGGATGGGGAACACATTTATACCTGTGGCGGATTCATTTCGATATTTGGCAAAACTAATACAATATTGTAAAGTTTAAAAAAAAAAAGAAAACAGCTCCCATGCTGAAATCAATAAAAAGCTTTCGGATAGCAAAGGAAACCATCAATGAAATGAAAAAGGTAGCCTGCAGAATGGGAGAAAATATTTGCAAAGGATGTGATTGACAAGAAGTTAATATACAAAATATACAAACAACTCATACAACTCAATATCATAAAACAAATTCCCAACCAGAAAATAGGCAGAAGACATTTCTCCAAAGAAGACATACAGGCTTCCCTGGTTGTCCAGCAGTTAAGAATCTGCCTCGCAACATGGGGGCTGCCTGTTTGATCTGCGGTCCAAGAAGATCCCGCATGCCACGGAGCAACTAAGCCGGTGTGCTGCAAGTACTGAGCTCACGCAGCCTAGAGCCTGTGCTCCACAGCAAGAGGAGCCACTGCAATGAGAAGCCCAAGCACCGCAACTAGAGAGTAGCCCTCACTCTGCAGCTAGAGAAAGGCTTCATGCAGCAACCCAGGAAAGGTCTGGGGTTCTCCAGGAGGAAACAACAGATTTTTTTTTTTTTTCTCTACATTCCTTAGTCTTAGTCACATAAAACAGTTTTTTCTTTAAGTCCTGAACTGATGATTACACAACAAACAACTCAATTTAAACACTGTACTTGGGATTATATAACAACAATGTATCCTGCTTGAGGACAGTTTCTCCTTCCTGAAAACCTGACTAATCCTGATATCTTAGAATGTATATTATGGGAGTGGATCTGGTAGGATCTTTCTATTGTTAAGTTCTAATCCTGTTATCCTAAAACGTAAGTTGTAGGAGTGGGTCTCCTAATATCTTTACAACCTTGAGACTTATTGTAATAAGTTGTAATTTTTACAACCTTGAGATTTATTGTAACATAAAACAGATAGCCAATGGGAATTTGCTGTATGACTCAGAGAACTCAAACAGATACTCTCTGCGACAGGCTGAAGGGTGGGGTGGGGAGAGAGATGGGAGGGAGGTCTGAAAGTATGTAATTCCCTTGCTAATACTAGTGAGGGGGGCACTCTCTGCCTGCCTTCTGATATCTGTGTCAGAAGCTTTCTCTGCCCCTTTGCACTGTAATAAAACTTCTGCCACACAAGAGCCCCGAGTGGTCAAGCTTGGTCTCTGGTCCCGAAGTTGAATCTTTGGCGGTCATGAATCCGACATCGTTCACCATAAGCTATCACAAGCACAAGGTTGAAAAATCTCAAATAATAAAAAGTGTATACAGTGAAAAGTAAATTTTTCTCCCCTGTCCATCTACAGTTCTTCCAATTTTTTTTCCTGGACCCAACCACTATTGCTGGTTTCTGTATGTTATAGATGGAGATTTCCCTTTTTAATCAGGTGTCATTTTACCACACGTTCTATCTGTACCTTTGTTTTTCAATTTAAAATATATTCTGAAAATATTCCATTTTTTTACAGACAAATCTGATGTAGTTTAAGATAATAAAAATTATGACATTCTTGGTTTTTAAAAAATTACCAAGTGTAACAAAAATCATCCTTATTCCATAATAATAGTTTTATTGGGGAACAAAGTCACCCAGATTAAAAACTATCCATTCTCCAGCCTTCCTTGAATTTAACCATGTCTGTGTGACTAAATTAT TCONS_00132995 TCONS_00132996 TCONS_00132998 TCONS_00132999 . 3' 2592 TCONS_00132995 TCONS_00132996 TCONS_00132998 TCONS_00132999 . 3' 4522 EMBV3_04682 AGCCTGTGCCCCACAATTAGAGAGTAACCCCCGCTCACCACAACTAGAGAAAGCTCTTGT Gene BVV0102_200585 + 0 NULL GK000017.2:45696518-45824030 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16053 ATTCAAGGGCTTCCCTGGTGGCTCAGTGATAAACAATTCGACTGCCAATGCAGGGACATG Gene BVV0102_415833 + 1 EMBV3_30952 GK000011.2:47384704-47409404 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03031 CATTGATAGATCCACTCCAGAGAAAGAAGCTGAGGAGGCCCCTTATATGGAAGACTGGGA Gene GeneID:516280|RIC3:XM_002693062:368_cdna UTR3_Alt 2 NULL GeneID:516280 15 GENE RIC3 NULL resistance to inhibitors of cholinesterase 3 homolog (C. elegans) EMBV3_11191 TGGAGCAGTGCGTGAACCTGTGCAAGGCCCACGTCATGATGGTCACCTGCTTCGACATCA Gene GeneID:100337486|LOC100337486:XM_002696786:498_cdna Constitutive 0 NULL GeneID:100337486 21 GENE LOC100337486 NULL hCG22909-like EMBV3_18108 AATCAGGAACTGGCCTACTTCTACCCTGAGAAGAGTCAAGTGAATTCTGAGGGACTCCAC Variant GeneID:282208|CSN1S1:NM_181029:14_cdna 590^744 5 EMBV3_26469 GeneID:282208 6 GENE CSN1S1 CSN1 MGC133694 casein alpha s1 EMBV3_02446 GGAATTTGCGACGTGTTGCCAGAGAATTGGGTGAAAACATGAGTGATGAAGAACTTCGGG Gene GeneID:532953|CETN3:NM_001075976:12_cdna Constitutive 1 NULL GeneID:532953 7 GENE CETN3 MGC142353 centrin, EF-hand protein, 3 (CDC31 homolog, yeast) EMBV3_30568 AAACCCACGTGCTGAAGCATTCCTACAGAGTTTTGAGTGCCTACATCAGTGGCACACGTG Gene GeneID:534265|CTR9:XR_082707:480_cdna Constitutive 0 NULL GeneID:534265 15 GENE CTR9 NULL Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) EMBV3_04068 ACAAAAACTCTTAGTGCCGTCCCTTACGGTCACACACATTGCCTGCCACCATCCCTAATC Gene BVT0102_107132 + 0 NULL GK000014.2:78593627-78599362 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07359 ACCATACTCACTAACCCTATCATTGCCAAAGCTGGACTTGTCACCTTCCTGAGGGGTGCA Gene GeneID:788304|LOC788304:XM_002693163:101_cdna Constitutive 0 NULL GeneID:788304 15 GENE LOC788304 NULL similar to olfactory receptor 669 EMBV3_29417 TATTTGTGGCGGATTGTCTGTGTCCTTCAAAAAGGCGCAGACCCCAGCCATACCCTTCCA Gene GeneID:509037|TMX1:NM_001075385:40_cdna UTR3_Alt 3 NULL GeneID:509037 10 GENE TMX1 TXNDC1 thioredoxin-related transmembrane protein 1 EMBV3_05416 GGGAGATAGAGGTGACCAGGAGGAGAAGAGGGGGAATCAAAAGAGGAGAGAGCAAGTTAG Gene BVV0102_217921 + 0 NULL GK000009.2:70804300-70873215 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089138 TCONS_00187689 TCONS_00206887 TCONS_00219680 TCONS_00047409 TCONS_00253081 TCONS_00251891 TCONS_00249414 TCONS_00091267 TCONS_00010728 TCONS_00218369 11 XLOC_053924 XLOC_113734 XLOC_125407 XLOC_132999 XLOC_027543 XLOC_156022 XLOC_154832 XLOC_152357 XLOC_056042 XLOC_006279 XLOC_131689 NonCoding TCONS_00219680 XLOC_132999 NonCoding NonCoding - 7:23927258-23928925 - TSS163678 1667 2 TCONS_00219680_1 73 0.997600479904019 1 0 0.000432573933438646 0.000550544628998304 0.000577704761134305 0.000528065937718158 0.00114813690887213 0.000197414097015665 0.000104949801952048 0.000388046551507619 0.000629665071903876 4.68958848802276e-05 1.23591256211162e-05 2.1756248374637e-05 1.26223239930908e-05 0.000750701267147809 0.000122998186196972 0 0 0 0.00017529423333208 0.00033631090838196 0.00040180673176359 2.22575557747623e-06 0 0.000530494254162719 0.00079423150843562 0.000692612149154003 0.000362198085910791 2.88097716616831e-06 1.35901538159244e-05 9.01657114075221e-07 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 7e-88 329 89.37 0.151169766046791 0 noncoding GAATCCAGCCTCTACTCTAGATTTTTAATCCTTGCTTTTTGGTATTTGTTATCAATTTTGTACCTTTAATAACCCAATCTTCAATACCCATTTTTACGTGGGAGCAAGATCACTGGCTTGACTGCTCTCTCCCTCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTCTATCTCTTCCCTCCTCTTTCTCTTCTCTGCCCGACTCTGTGAATCTCTTTGTGTGTTCTGGACTGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCTCTTCTTTTCATTCCCCCCTTTATCCTCCTGACCACTTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCGTGAACATCTCTGAGCAGTCCAGACTGTGGAGAGCACATAAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCTCTTTTGATTCCCCCTCTTCTCCTCCTGGTCACCTATATCTCCCTCCTCCCTCTTCTCTTCTCCATGTAACTCTGTGAACCCCTCTGGGTGTCCCTCACTGTGGAGAAACTTTTCATCTTTAACTTAGATGTTTTATCATTGGTGCTGTATAGATGGAGAAGTCTTGAAGCTACTGTAAGAATATGAATGAAAACCAGAGGCAGGAGGCTAAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATTGATAGGAGCTCATCAAACGCCTCCATACCTACACTGAAACCAAGCACCACCCAAGGGCCAAGTTCCAGAGCAAGACATACCATACAAATTCTCCAGCAACGCAGAAACACAGCCCAGAGCTTCAATATACAGGCTGCCCAAAGTCACACCAAACTCACTGACATCTCATAACTCATTACTGGACACTTCACTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAATACTGACACAAGCTTCCCTAAGCAGGAAACCTTGACAAGCCACCCATCCAGCCTCTCCCACAGTGAGGAAACTCCACAATAAAGAGAACTCCTGGAAAGGCCTCCCCAAACACAGCAATATAAACAAGATGAAAAGGCAGAGGAATACCCAGCAGGTAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTATCTGATAAAGAATTCCAAATAATGATAGTGAAAATTATCCAAAATCTTGAAAACAAAATGGAGTTACAGATAAGTAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGCAAAATAAAAATGAGTTGATATATAATGAATAATGCAATAAATGAGATCAAAAACACTCTGGAGGGAACCAACAGTAGAATAATGGAGGCAGAAGATAGGATAAGTGAGGTAGAAGATACAATGGTAGAAATAAATGAAACAGAGAGTAAAAAAGAAAAACGAATTAAAATAAATGAGGACAACCTCAGAGACTCTCTGAGGCAATGTTAACAATCTCTGGGACAATGTTAAACACCCCAACATTCGAATCATAGGAGTCCTAGAAGAAGAAGACAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAATCACCCAAATCCAAGAAACCCAGAGAGACCCAAACAGGATAAACCCAAGGCGAAACAC TCONS_00212582 TCONS_00212583 TCONS_00212584 TCONS_00212585 TCONS_00212586 . 3' 10109 TCONS_00212582 TCONS_00212583 TCONS_00212584 TCONS_00212585 TCONS_00212586 . 3' 11775 EMBV3_42171 AAATGATTATGGCATTAAGAGAAGCTTTGACATCCACGAATCCAAAAGCTGCTCTCAAGT Variant GeneID:614766|RPRD2:XM_002686048:259_cdna 437^514 3 EMBV3_11814 GeneID:614766 3 GENE RPRD2 NULL Regulation of nuclear pre-mRNA domain containing 2 EMBV3_41649 GGCAGGAGAATGATTGGATGGGTGTCCTGAGCACCTTGGTCTCCACCAGCTTGCTATATT Gene BVT0102_086008 + 1 EMBV3_02803 GK000018.2:26823808-28446206 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19514 CTCTCTCCAGGGGTATTTGAGAATGTCCCCAGTCTTGTCGATGAAGAAGTGAAAGTGGCC Gene GeneID:613902|TTLL11:NM_001102272:207_cdna UTR3_Alt 2 NULL GeneID:613902 11 GENE TTLL11 MGC159457 tubulin tyrosine ligase-like family, member 11 EMBV3_12778 ATTTACGGGACAAGATCACTGGAGGGGGCTGTGCTTGAAAGCCAGGAGAACTGTATAGCA Gene BVT0101_023505 + 0 NULL GK000008.2:5574438-5583682 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229450 1 XLOC_138945 NonCoding TCONS_00229450 XLOC_138945 NonCoding NonCoding - 8:5578633-5579254 - TSS170954 621 1 TCONS_00229450_1 37 0.457326892109501 1 0 0 1.61810628373249e-05 0 0 0 1.15203344286977e-05 9.39083930045085e-06 0 1.27055356990426e-05 0 0 0 0 0 0 0.000680490433059684 0 0.000363636133867294 0 0 0 0.000203142434777116 0.000635239750388741 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.128162060749943 0.252767549115708 -0.0170430134022803 0.775948240098022 GTAAAAAATAGAGATGAATAGGCTTCCCTGTCTGGCCATGGCACAGTAATTGTTACCATCCTCAACAGTATGCTGTTGTCCTAAACGGCTATAAAACTGGACAAAAAAATACACAGCAGCTGTTTTCAGGAACTGGGTAACAGGCAAAGCAGACTGTGATAACGTGAGAGAAAGGAAGCACACAGGGTGAACCCGGGTTCAGCATGTCCGGCTGCCTGAAGAACTTTCCCAGCTACCATCCAGGAAAGCGGAGCTCAAGCCTTGGCAGCTGAGGAGGCTGCCCCAGTCAGCTGGGATTTACGGGACAAGATCACTGGAGGGGGCTGTGCTTGAAAGCCAGGAGAACTGTATAGCAATTTTTATACCAGTGTCATTTTTAACAGCAAAAACTCCAGGACAACCTAAATATCCATCAACAGGAGAGTGGATCAATTGTGGTATTGTCGCACAATAGACTGTTACAAGGCAATGAACATGAATGAACTGGTTATAAACAAGACAGTAGGGCAGTGTCGAGTGAAAAAGGCAATTCCCAAAAGACTTCATTCAACAAATATGTTTTGTAAAATCAAAGACAACTAAAACTACAGTAAGTCACACATGAATATGTGATCAAATATA TCONS_00226791 . 3' 2029 TCONS_00226791 . 3' 2649 EMBV3_13650 TGTCCGGAGTTACAGAGGATGAGTGCAGATAGTCCCTTCTGTTAAAGCTCTGTTGTACCC Gene GeneID:515186|AGXT2L1:NM_001015605:41_cdna Constitutive 0 NULL GeneID:515186 6 GENE AGXT2L1 NULL alanine-glyoxylate aminotransferase 2-like 1 EMBV3_05714 TGACATTCTCATATCACGGGGTCAAGAAGCACACATGCCCAGCCAAAGCCAAGGGTCTCT Gene BVT0102_053090 - 1 EMBV3_38026 GK000018.2:34275151-34348845 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085970 1 XLOC_052008 NonCoding TCONS_00085970 XLOC_052008 NonCoding NonCoding BEAN1 18:34341824-34347227 x TSS64072 1053 2 TCONS_00085970_2 41 0.110161443494777 2 0.8054424287301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000334644297412236 0 0 0 0 0 0 0 0 0 0 XM_005195238.1 TK2 PREDICTED: Bos taurus thymidine kinase 2, mitochondrial (TK2), 0.0 1900 100.00 0.999050332383666 0 noncoding 0 0 0 0 -0.018913427419131 0.86511970312033 0.00623538516323674 0.898900930441671 GAGAGAGGAAAACATGAAATGACTGGATGTGTGAACTGATACTCAGGACTGGTAAGTGACAAGCCAACGGTCATTCTGTTACTCCGTGGTCAAGTCAAGCAAGAACTCAAGCCCAAACTTCCAAGTCCAGAGCTCACTGCACTCTGTGTCCCCATCCCTGGCATGCTGGTCCCACCTCCCCAGAGCGAGTGAGCCGCAGACACTCGGTGAGCCACAGGGGCAGGGCAAGCATTCCTGGGCCCTGTTCTGAAAGGGGTCCTTCTGTCTGCCCTCCCAGAGCCGAGGTCCTAGGCCCTGTTCTGCATCTGTCATGTATGATTATGCATGGTTTCCAGGGCTTGTGTCTGAGTGCCCTCTGTGTCCTCAAGCTCAGCCCTGGGTCCAAGTTCACCAAAGGTGCCCAAGGCATATATTGAATGGGTGGCTCCAGCCTTGAGACCAGATGAAGAAGTGGCAGGGAGGCCCTGAACTCCCTCGCGGGAATGAGGTCTCTGTCTTGGGTGTCTGAGGATACTGTACTGAGAATGCTGTAGGAGGGCCCTGTTCCCAGGTGAAGGCCTGGACTTAGGCAAATCAGAAGCTGGAAGCTCAGCTGTGGCCACCTGTTCCTTCTTATCCCTTTCTAGCACCATGTCCAAAAGCCTCTCCCACATTCAGCCCATGGCAGGGACAGGGAGGTGAAGCAGGAACTTGGGGTTGCTGCCTGAGCTGTGAAGATGCCCGGCCAGCAGTTCTGCCCATGCTGGTAGCTCTTGAAACCTACTGACATTCATTAGAAGCGGCTGGCTTGAAATCCTTACTTTCTGGGCCAGTATATCATCCTACCTGAGAGCCAAGCCTTTGCCTGCTGAAGTTCATTGTAAGCTGCTCTCCTGCAGGTGCCTTCACTGGGGAGAGGGAGAGACCCTTGGCTTTGGCTGGGCATGTGTGCTTCTTGACCCCGTGATATGAGAATGTCAGGGTATGTGAATTTCTGGGATTCTTTGGGGGCCAAACGCACACCACTGTTTTGAGAGCCCCTGCTATGTGTAGGCTCTGTTTAAAGAGCTCACT TCONS_00082847 r 5' 1149 TCONS_00082847 r 5' 1149 EMBV3_25271 TCTAGAGAAGATACAGAAAGACCAAGAGGAGCGAGAACGGAACAACCAGAACCCCTGGAC Gene GeneID:538054|MRPL16:NM_001034641:11_cdna Constitutive 0 NULL GeneID:538054 15 GENE MRPL16 MGC127303 mitochondrial ribosomal protein L16 EMBV3_35999 CCATGTAACTCCCACCCAGGTAAAGAAATAGAACATTTACCAGCATCTTGTAAGCCATCC Gene BVV0102_272496 - 0 NULL GK000011.2:94932216-95125307 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20479 AGTTTGAGACTTGAGGTGATTGTGTGGGGGTTATTTGGGTTTACCCATTGCTGGCAGTGG Gene GeneID:539676|DMTF1:XM_002686719:74_cdna Constitutive 2 NULL GeneID:539676 4 GENE DMTF1 NULL cyclin D binding myb-like transcription factor 1 EMBV3_27347 TTGAGAAATCCAAGTACTGCCGTTTCAATCAGGACCCGGAAGCAGTGGACGAAGGTCGCA Gene GeneID:534601|ATE1:XM_002698547:1_cdna Constitutive 0 NULL GeneID:534601 26 GENE ATE1 NULL arginyltransferase 1 EMBV3_23579 TGGTAAACCAAGGTGCCAACGATCCAGTCCTCACTTGAAGAAAATGGGCTTTGCCGGGGG Gene GeneID:616392|TMEM206:NM_001046580:126_cdna Constitutive 0 NULL GeneID:616392 16 GENE TMEM206 C16H1orf75 C1orf75 MGC137693 transmembrane protein 206 EMBV3_30154 CAGCAGTGTGACTTGGCTTAGAGACATCCATTGACTTTGGAGATAAATGCTCAGGCCAGC Gene BVV0102_288212 + 0 NULL GK000003.2:78644548-78663145 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170373 TCONS_00170362 TCONS_00170370 TCONS_00170366 TCONS_00170369 TCONS_00170372 TCONS_00170365 TCONS_00170371 1 XLOC_103566 Coding TCONS_00170371 XLOC_103566 NonCoding Coding SLC35D1 3:78631900-78651143 j TSS127316 7160 1 TCONS_00170371_14 96 0.254888268156425 3 0.628053216921318 0.00583684474328799 0.0010125356358299 0.0044944012674515 0.00275244803415887 0.00316805569685158 0.000918157715272469 0.00243772204992667 0.0037418945179576 0.00526294057350966 0.00116445753103061 0.000181176964109341 2.371375422058e-10 0.000672903956134562 0.00183602365605036 0.000136072677527656 7.22151704121177e-23 1.69915441580356e-09 2.76885719841007e-10 0.00702358641976858 0.00536118548627488 0.00235358910295087 1.6818276971919e-05 6.83699778940368e-16 6.94898673002218e-26 0.00390789179005046 0.00435315147277341 0.00211774307431136 2.11785266479809e-05 1.7745187798506e-10 3.49402457598721e-05 NM_001082459.2 SLC35D1 Bos taurus solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 (SLC35D1), mRNA. 0.0 738 100.00 0.0569832402234637 NM_015139.2 SLC35D1 Homo sapiens solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 (SLC35D1), mRNA. 0.0 1709 69.58 0.577234636871508 0 noncoding 0 1 1 1 1.76548408028484 0.0354170159625277 -0.0803025491535325 0.155587668127699 GGCTCATTTGTCTTCAGCCAGGAGAGCCACATTGACTTGAATATTGAGCTGCAGTTAGCAGCTTGAAGCCTGAGGCCTCTTTCATCTGAATTTGTGATTCTAGTGCTTTAAGATCCAAGAGGCCGCAGCATCCCTGAATTCCAAAAGCATTAGTGAGAATATATTAATAACTTATATTGGAATGGTCTTTGGTGGAGATTATATTTTCACTTGGACAAACTTCATTGGCTTAAATATCAGCATTGCTGGGAGCCTGGTATATTCCTACATCACCTTCTCTGAAGAGCAGCTGAGCAAACAATCAGAAGCCAGTAGCAAGCTGGACATTAAGGGGAAAGGAGCAGTATGACAAGGGTTGCATCGACTGCATTGGCCCAAGTTTTCGATCAAATGGGAACACTGGCAATTCTTACACAGATACTGAGGTGTCTTGATCATGAAGAAAATACCATTGCACTTGTACAATCTGAGGATTGATTGCTGCCTTTTAAAATTTTATGAGAGAAACTTATAATTGACTCTTTTAAATATGCCCTTAGAATTAATTTATATCAGACTGGAAAATGTACTGGGCTTTTTTATTTATTTTTCTTCTATGCCGACAGTGAAACATCCATGTTTTGAAAATATTTTATTCCATAGTCTGATATCCAGGTGTCCCTGAGAGCCACATATCTAAAGCGTTCCATCAGAAGCCTCACTGTTCACGTCGTTGCTGAGTCTGGAGACAGTTTGGCCTTCCTTCTGCTGGAAATGCACCTGAGGATCTGAAGTTAGTCTTCTTTGAATTTTCTTTCTTAACGATTGCCTTTTCTTCATGAGGCTACCATTACTGCTTTGGCCAAAGAGGACATCTTTGGCACTAAAGAAATGTGTGTGGCTTCAAAGTGTATTGGTTTCTACATGGGCTTTCCTGAGAGCTCATGGGATGAAGTAGGGTGTGTTCCTTGAAAATGTCCTATTCCCTGTATGTGGTGTAGGCTGAGGAGAATGAAGGGGTGAAGGAAGTAGACCTTTTACTCATTTTATTCATCTGTCAGAGTCGTTCATTCAACTAAAAGGTATCGTGCGTGTAATAGGTGCCAGGCATTGTGCTGAGTGCTGGGGGTGGAGAGATGTTCTTAGAGGTAGTTGCCTGATCTTGCTCCTGCTATAGTGACCAAGGGTAAGACTGAGAACTTAGCTCCGTGGATTTATTCAGAAGATGTTGGGACTGTGAACAAGTCTTAGAGGTTTTCTCAGCTCTCAGAAACTGCAAATCTATATGCAGGGTTAGAAGCACCACCTCCACAGCGATGTGAAGCCAAATGCTGCAGTGTACATCAAATGCATGTGAACCCTGCCATCCTAAACCATGAGCTCGGCTGTTCTTGCCCAAGTGAGAATGGCATGCTGGGAACATGGCCTCCATCTGTTTCCCCTTGCTTCCTGCTTCTGGGTTTTGTTGCTACTCTTTTTACTTCTGCTTGAATCAGTATGACTACCCTTACATTTCTGAGTGTATGATTTCGAGGGGAAAGGCTGGTTAGATGTTTCTGTATGGTCCAGGCTTGGACTGTGTTGCTGGCACCGTCAGTGTTAGAGCCATCACCTTCCTTCCACTTCCTTCAATGGCATGAGCATAACCTCTTTCCTTTGGACACTCCTGCCACATCCCACATTAATGAGCAGGCCTGCCTCTCTCAAGGTCAGTGCTGCATCCTGGGAGAGCAGCCGTGGATGGGCCTTGCCTGAATTGCCTCTTTGGGCAGGTCAGGTGTTAACTCAAACACAGCAGTGTGACTTGGCTTAGAGACATCCATTGACTTTGGAGATAAATGCTCAGGCCAGCTGTGCAGTCATGTGCAGGAAGCTGGCTACCTTTGCGTTGGTGTACATGATGGTTTTCATTTCATCAGGTTTGCAATCTACTGGCCTTTGTTGACCTAAACAGCTAGTATTCTGGTGCCTCAACAGGGAACCTGGAAGGTTTTGATTTCGTCCTATTTTTGAAAAAGAGTTATATTGAGGTCCTTTTCATATTCATATCTTTCCCTTATTTTTGGTTTGTCTTTGTCAAAGCCTAGCCAGTGGTGCTGGGTCCCTGGAATTAGCCTCATAGCCAACTCTCAAGTTAGTAGCTCCATATAGGGAGTCCTGAGACACTGTTTCCTAACATTATGTGAGCTGAGAAAATTTAAGTGGGAGAATAGGATATTATGTTGTGCAAGATATCACCTTATCCCTGTTTTATTGATAAAAAAGAAAGACTCGGAGAAAAATGACTTGCTAATAAGTCAGAATTCCTGTTTTTTTCCCACTGAACTGTGCTGCCATTGATAACCCCACCTTCTCCTCTGAGGAAGTAGTGGTGCCAGCTGAGCTAGCCTGAGCTCTTTGGAGGAGGCGAGTGATTGATGGAATTTAGAGTCCGCAAGGAATAGGCTTTGTGTGTCAGGGAGAGTGATGGGCTCTCTGCGTGCCTGAGCTTCTGTCTTACTCCAGGCTGGCCATGGGTGACACGCACCCTGCCTATGAATTTTGCTGCCCCTGCCCACTTTTGCCTGGGGACAAGGGGAATGCATTTTGGGAGCTAATTTTGGTAGTTCTGTTCCTTCTTCTTTGAGCTATTGGGAGGAGGGAACTTTGACATTAGAAATAGTTTGTGTGCATTCAGAGATGTTGGACTAAGACCACTCCACCCGCCCCCCGCCCCGCCCCCAGCCCCGCCAAGTGTTGAACTGCTTCTTGGAGAGTCGGTTTCCTTGAAGATGTGTCATCTCTCTAGGTCTTATTTGAGAAAATCGTGCTTAGTAATAACTTCACTAAATGCACATGACATTAGGGCCCGTGGCCTAGACTGAGCTTTCTGACTGATGCAGCGGAGCAGCTTCAGGCTCTCTGCCCTGTTCATGTTGATTGTTGGATTCCCCTTCACCTGCCACCAACATCTTAAGAGCAAGAAGCCTGGGGAGGTTGGAGATTGAATAGACTGACCAACCATTTTTGTAGTTTGTTTTCAGTTATGTGCAGGCTTGGTTATGGCACAGGAAGAGATGTGCCTGGTATTCCAGCATCTTACAAAGCAAAAGTTCTTTGATCTGGAAACTACCTCCTGGGAGAAAAAGAGGCAGTATAGAATTAAATCCTGAATTTGCCCTTTGAGACAGATGAGCTGTGTTGAGGATGCTGAAAACACATTTGTGACTAGTGGCTCCTTTTTTTGAGTTAATGACAGCGATGCCCTCTTTGACCAGTCTGCTTTTAAGGCAGTGCCAGATTGATTTGAGTAACCTGATTGGTCAGGTTACACGTTGCCAGCACGTCAGGTGACTTTTAACTCCTTCGCGTGACTGTTGACTGTAGGAGTCAGTCATTTGTAGGATCCAGCTTGCACATAGGTTAAGAAAGAGAAGTATGTTTTGCGTTTGTTCTTTGTAGTTCTTATTGTATCAGCCATGTATGGAAAGTTCACAGCAGTAATGCTGATATGGGATCTTCATGGAGAGAAGAGTAGAGTTTCACTTTTGACTAGTTTGAAGTAGTACCCAGGATTTTGGGCAGGCCTACCTTTATTTTGGTTGTTATGGCATCTTTCAGTGAGCAGAGATTGACTATTTTATGCCAGGCATTATGCGAAGCTCTGCGGCAGCTGAGGTGAAGAGGACGTGGTTCTCATTCTCAAGGAATGTATAATTCTTTAGCCAGACCCCGATTGAGAGAAAGAAGCAGATGAAAGGAATCAGCGATTGATAAGTAGAAGCTGTCTGCACAGTTGTCAGCACTGGTGATTAGGGTGTCCCACCCATAGAGTTGACTGAAGCACTTCTTTAAGAGGACTTATACTAGTCCTCTAGCTCTGAGATGAGAGCCAGGCCATTCAAATTCTGTAACTCCCCGGGTCCCTCTGCTCTCTCCTGCATGTATTCTTGCTTCCCCATAGCTGTGTACTACTGGTCCCTCCCTATGAACAAGGCTGTGATTGATTTTTCTCTCCCTGAGGGAAAAATAATAATCTTCAAAATAAATAAGGCAAGGGATGCAGACTCCTCAGCACAATGCCTCGTGCATATTAGGCACTCAGCAAACGTTACTGTCATGATTTCAGGGTTAGACTGTAGGCAAAGATTAAGAGTCTTAATTTGTGCTCCTTAAATGCTAGAGGCCTGGGCAATGTATTTCTTTTTGAATGTGACCCTATAATTTGGTTGCTTCTAGAATGGTTAAAGAAGAGTTTCTGCTCATGGTCAACTTTTTAAAATATCTAGTGTGTATAGTTGGGCTATTGTATGATGCAGGTGATTCCACCTTTAAACAAGATTCTATTCTTTAAAGAAGAAAAGAGAAATGACTCTCATATTTTGGTAAGTTAAAAAAATATTAGTATCTATCTCAGAGAAATATAATTACACTTCAGAATGGTGATTCTGTTAAAAGTTCCCCAGTTTGTTACCTTAGGGTAGCTCCTGTGTAGGTTGGATGTTCTTCTCATCTCCGAATTAAATGCATTAGCTTCATGCTGCCTCTGTGTCCAGGCTTTTGTCAGTTGTTGGTCTTTGTGAACCTCTGGCACCATCGCTGTTTTCTAAGCCTACCTTCTAGTTCTTACTGTTAGGATGCCACTTCATCATGGTATGAGGAGATATTCTATGATGGGCTTTTTTTAAGCTTTCTTTTTTGAAAATACTTTTTAAAAAGAAATCTACTGGTTAGATTTTTTTTGTCTCACAAGATGTTTTTAGAGATTATTTTGTTCATAAACATTTCTTTCTCATGCTGATAATCAACTGACTTTTGTCTACAAATGTTGGTCTGTCACAGTATTTTTTCAATATAGATTCTATTTACCAAATGACCATTTTAGTGTTTTTAAAAGGTACTGAGGATTGAGATATGTAAATCAGGTGACATAAATATGAAAATTATGTGCCTAAATATTTTTGTAAAGGTGTCAAATAAATACTTTTTCTTCAACCCATGTATTAAAATTTCTTTCTAAGTGCCTGCAGAGACAGTCAAGAGCTGTAAGTCTGCCTCAGTTTAAGAGGATGACATCCCAATTAGTTGACTGAGACACAATAGAGAAAATACTGTTTGCCAATGTGATATTATGATTTATAATAAGAAATATGTATTTAGTCTTTGTCCTTATTCCTGGCACACTGCTCCTAAAACCCATGTAATTTCCTATATAAGAGCTACAGGAAAATCTTTTATTAGAGTATGTAGTTTTGTTTCCAGTTCATGAAATAGCTCCAGAGCCATAAAGGTGAAAAGGGTGCCTTTTGTTAGCATCTTTCAACCATTCCTAAGGTTATGTTAATGAGATGGCTTTTGGAAACTCCCTAAGGCTGGGAGCTGGTTGCCAGGGGAACCAACTGAGAGATTTATATTGGAACTTTCAGCCTCCATACATCTGCTCTTTCCAAGTGAAGAGAAGAGAGGCTAGGGGAGAGGAGCTGGAGGTTAAATCTGTGGCCATTGATTGAGTCAATCATGTCAACATAATGAAGCCTACGTAAACGTCCATGAACTATGAGATCTGGACAGCTCCCAAGTTACTGAACGTGCTTAGGTGATGGTCTCCTGGAACAGTGTGCAGGTTCTGCATGCGCCCCACACTCCTTGCCCTCTGCAGCTCTTCATCTGCTATTCCCGAGTTACATATTTTTGTAATAAACCAATAGTTTAGTAAGTAAACTGTTTTCCTGAGTTCTGTGAGCCACTCCCACAAATTAATCGAACCTGAGAAGAGTGTGATTTATAGCTGTTTGGTCAGAAGCACAGGTGGCAATCTGGATTTGTGATTTGTGTTGGAAATGGGTTGAAGGAACAGTCTTGTGGGACTCAGCCTTTTGCTGCGGGATCTGATACTAACTCCAAGTTCAGTATCAGAACTGAATTGTAGCTCATGTAGCCCATGTAGCAGATTGGCTTGGTATGGGGCAAAAACACACGTTTGGTAACCAGAAATGTGAGTACAGTGCAGAGAAGATGACCTGGGAGCAGTTTTTCCTTTACAGCCATTCAATCCTTTGCACGAATAGCACATATGATTCAATATTCAGTGACTGGTGTACTTGTGGTAAACTGAAAGGAAAGAAATGCATATAAAAATTGCCTTTAAAACATTTCATCTCCTTAATCAGGTGCTTAAGACTCTGAATAACTTTATTAGGAAATAACCCCCAAATATAAAACATGCTATTCAAGAAGCTATTGGTACTGGCAAAAACAGGTAGAAGTACATTAAGGCATTAAAAAAGAACTGTGGTAAGATACATAATGTAAAACTTACTGTCTTAATGTTTTTGAAGTGTCCAGTTCAGGACCAATACTGTATATTCACACTGTTCTGCAGCCAGGCTCCAGAACCGTTTCCATCTTGTAAAACTGCAGTCCGTAACCATTACAGAGCTCAGTCCCCGCTGCCCCCAGACCCCAGCAACTACCATTCTACTTTGTGCCTCCCTGGATAACTCCTGTAAGTAAAATCGTACAGTATCTGTCATTCTGTGACTGTCTCATCTCACTTAACATAATGTCCTTGAGGGTCATCTGTGTCATAGCACGTGTCAGCATTTCTTTCCAAGGCTGAATAATTTTCCATTGTATGTATATGCTAGCTTTTGTATATCCGTCCATCCGCTGCTGGACACTGGTTTCTTCCAGCATGTGGCTATTGTGAATAAGAATTGCTAAACATGCCAAGCTGTCACTTTGAGTTGCTCTAACAAATGGCCATAGATGGCAAATAACAAACATTGATTTCTCACAGCTCTGAGGCTGGAATGTCCAAGATCAAAATGCCAGCAGATGTGGCAGCTGCTAAGAGTCCGCTTCCTGGTTTGCAGATGTCCATCTTCCCAAAGCCTCACGTGGGAGAGAGCAGAGAGGAAGCAAGCTGTCTTGATTCTTCTTAAAAGGACTCTTAATCTTGAGGGCTCCACCTTCATGATTTAGCTACCTACCAAAGACCACATCTGCAAATACTATCTTGTCAGGGATTGGGGTTTTAACAGATGAATTGGGAGCAGGGGATGGGACACAAAATCTATAGGAGTGGCTGTACAAATAGGCTTTTGATTCTTCTTTGGAATTGCTAGGTCATATAATAATTCTATTTTAAATTTTTTGAGGAATGGCTATACTGTTTTCCATTGTGACTGTACCATTTAACG EMBV3_28060 AGAACCATGACCGTGCAGCCACTCCTGAGTGATAACCAGTATAACATAAACGTGGCAGCC Gene GeneID:511940|MAL2:NM_001081719:19_cdna UTR3_Alt 2 NULL GeneID:511940 14 GENE MAL2 MGC151721 mal, T-cell differentiation protein 2 EMBV3_38932 AGCCCGACACTCTGGTGGTCATCAAACTGGCCAACACTGGCTACAAGTCTGTGTACGGCA Gene GeneID:617981|LOC617981:XM_002698136:513_cdna Constitutive 0 NULL GeneID:617981 25 GENE LOC617981 NULL similar to mCG56186 EMBV3_04351 CAAGCTGCTGGAGAACTTTGTGGCTTGCATCATCTTCGCTTTCATCAGCAACACCTCCCT Gene GeneID:100298625|LOC100298625:XM_002696557:41_cdna Constitutive 0 NULL GeneID:100298625 21 GENE LOC100298625 NULL similar to myeloid-associated differentiation marker EMBV3_16423 ACGGCTCTGATGAATCCCAGGAGACATGCACCCCCAAGACGTGCTCCCAGGATGAGTTCC Variant GeneID:281276|LDLR:NM_001166530:276_cdna 284^406 3 EMBV3_27633 GeneID:281276 7 GENE LDLR NULL low density lipoprotein receptor EMBV3_41355 ACTCAGGCGTGCAGAGGATACTCTTTTAGCGTTAAGTATGCCCCGTGACTTATTTGGCAC Gene GeneID:540152|CDC42EP4:NM_001046471:14_cdna UTR3_Alt 1 NULL GeneID:540152 19 GENE CDC42EP4 MGC138126 CDC42 effector protein (Rho GTPase binding) 4 EMBV3_41325 AATCTTGCACTTTGAAACCGCGGGACTGTAGCAGGGTGCGCGCGTGTGTCCTGTTTTGTT Gene GeneID:100336902|LOC100336902:XM_002683763:1_cdna Constitutive 0 NULL GeneID:100336902 16 GENE LOC100336902 NULL dehydrogenase/reductase (SDR family) member 3-like EMBV3_36177 TGGCCACCTCATTCTGTACTCAGCATTTGGGACGTGAAGAATCACCTTGAGACTGAAAAC Gene BVT0102_186574 + 0 NULL GK000008.2:104334928-104342904 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228997 TCONS_00228991 TCONS_00228994 TCONS_00228992 TCONS_00228996 TCONS_00228993 TCONS_00228995 1 XLOC_138630 Coding TCONS_00228996 XLOC_138630 Coding Coding ALAD 8:104336314-104352855 j TSS170589 7904 1 TCONS_00228996_4 329 0.26745951417004 13 0.522914147521161 0.00050756539614904 6.19548551813859e-05 0.000607063412950556 3.91949678235525e-11 0.0007979515611056 5.41455214137311e-08 0.000231494154617817 0.000211809623975791 0.000216928432828141 5.06622987617589e-26 2.26602037501449e-17 1.33776939521552e-38 6.57892727459906e-06 3.4586576845639e-23 4.47040505330979e-14 0.000188435685811718 4.55958052894324e-15 0.000549952017031913 0.000594570486992347 0.00136183368312714 0.000585545952969369 9.66170457619232e-41 1.82172100081693e-23 8.34166456604542e-27 0.00214402890457947 0.000315022906285794 0.000264224392034431 7.4943616462264e-24 6.88490512471209e-13 6.82005388766166e-42 NM_001014895.1 ALAD Bos taurus aminolevulinate dehydratase (ALAD), mRNA. 0.0 2076 99.91 0.145875506072875 NM_000031.5 ALAD Homo sapiens aminolevulinate dehydratase (ALAD), mRNA. 0.0 1918 81.96 0.247722672064777 TCONS_00228996_4 sp|Q58DK5|HEM2_BOVIN HEM2_BOVIN Delta-aminolevulinic acid dehydratase; 0.0 679 100.00 0.996960486322188 1 coding 0 0 0 0 -1.24884558129369 0.0426981932760231 0.00102200691382387 0.984787497821917 CCGCCCCGCCCCCACGTGGCCTCCGGGAGACTAAAGCGCGCGACAGCGGTGGCGGGAGCGGTGTCTCGGACTCCTTAGGGAGGCAGAGTGCCGTGGGGAGGCAAAAATGAACTAAGCGTGGACCCTGCCCTGCAGAAGCTCTGCCTACGGGGACGAGATAAGAGCTGAGCACACGGCAGACCCCCTGGGAGACCTCAATTCCAACCAGCTGACTCTCCTGTGCCCCCCGTGCCCACCATGCATCCTCAGTCAGTTCTGCACAGCGGCTACTTCCACCCACTGCTCCGGAACTGGCAGACAGCCGCCACCAGCCTCAGCGCCTCCAACCTTATCTACCCCATCTTTGTCACGGATGTTCCTGATGACAAACAGCCCATCGCCAGCCTCCCAGGAGTGGCCAGGTACGGTGTGAACCGGCTGGAAGAGATGCTGAAACCCCTGGTGGAAGAGGGCCTGCGCTGTGTCCTGATCTTTGGTGTCCCCAGCAGAGTTCCCAAGGATGAGCGGGGCTCCGCAGCCGACTCCGAGGACTCCCCGGCTATCGAGGCCATCCGTCTGTTGCGCAAGAATTTCCCCAGCCTCCTGGTGGCCTGTGACGTGTGCCTATGTCCCTATACCTCCCACGGTCACTGCGGGCTTCTGAGTGAGAACGGGTCATTCCAAGCTGAGGAGAGCCGCCAGCGGCTGGCAGAGGTGGCTCTGGCCTATGCCAAGGCGGGATGTCAGGTGGTGGCCCCGTCGGACATGATGGACGGACGCGTGGAGGCCATCAAGGAAGCTCTGATGGCACATGGATTCGGCAACAGGGTATCAGTGATGAGCTATAGTGCCAAATTCGCTTCTTGTTTCTATGGACCTTTCCGGGACGCGGCTCAGTCGAGCCCGGCTTTTGGAGATCGCCGCTGCTACCAGCTGCCACCCGGAGCACGAGGCCTGGCCCTCCGCGCGGTGGACCGGGATGTTCGGGAGGGAGCAGACTTGCTCATGGTGAAGCCAGGAACGCCCTACCTGGACATCGTACGGGAGGTAAAGAACAAGCACCCTGAGCTCCCCCTGGCTGTGTACCACGTTTCTGGAGAGTTTGCCATGCTGTGGCACGGGGCCCAGGCCGGGGCATTTGATCTCAAGGCTGCTGTACTAGAGGTCATGACTGCTTTCCGCAGAGCAGGTGCCGATGTCATCATTACCTACTACACACCTCAGCTACTGCAGTGGCTGAAGGAGTGATGGAGAAAGTGTACCAGATTCAAGAACTAGAACTTTTCCATTCCTGAGCCTTGGAGAAGTGAAAACCAAAGTAAACGATGCTTTTAGAACTGTGCACTCCTGCCCTTTTCCTGCTTATGTGCTGGAGGGTGCCTGGAAGCCCTGGGTGGTTTTTGCCAGCCTGCCAAATCTTCCCACTTGGAGCCACATCCTCACTGGCTCTCCCAGGCTTCCCAGCCCCTCCTCTGGGTCAGTCCTGAAGCTCACCTCTGCCAACCCTGCTCCTTCTTCTGGGGCTGCTTTAGCTGGAAAGCCACCAGGACTCATGGCATCAGCTCAGTGGGGTCTGGGAGAAGGGCTTGGAACATTAAGGGAGAGAGGGCAGTTGATTCTTGGACCCTAAGAAGCTCTGGAAAGCTGGAGGCCTCTGGCAGCAGAGGTGGGCACACAGGCCTAGATTGACCCCCTGGGTTTAGAGTTGACATTTGCTGCAATTCCACTGGAAAGCGATCCCCACACAGGCCAGTGGTTGCCAGGCTGCCTGAGGTCTGCTGTTGTTCTCTGAGCCATAAACCTGGAGAAGAATTACTCATTAACAAGCAGAAAAGAATTAATTCATTAACAAGCAGGAACGCTGCCGAAGGATCGAAATTCAGAAGCAAAGAGAATTCCTGACTGTTGGCGATGGCACCACCAAAAAGGCTCTTTATTGCAGAGATATTTCTTGAGAAGGTCTGCTTTGTGCCCACGCACAATACCGGGTCCTGGGGATATATAGCAGGACAGACTTCAGCTTGTCTCTGTGTGGAATCTACACAAGGGAACCAGGGTGACAGATGCCAAGAAGAAAACAGACAAATAAGGCAGTTACAGATGGTAATAGTGCTTCCAGGGAGAGAAAGGGTCTGAGACAGAATAATAGATGATGGGCCTCGCTTGAGAAGCTCTTCCTGAGATTGAGGGGCAAGGAAAGGCCTTTAACAAGAGGAGAGGGAAGCGGATGTCAGAAGCTGTGAGAATGACGGCAGAGTGTGCAGGTTCCTGCAACAGCAGGAACCCCATCGTGGGAACCAGATGAGGAAGAAGGTGGGTGACAGCACCGGAGGTTGGAAAGGTAGATCCCACACTTTGTAGGAAGCTTGGTTTCTGTTTTGCATCTGATAGAAAGCCATCTGAAGGGTCTTAACCAGGCGTTATACGTGTTCATGTTCCCCCATTCTGCTGCTTTGAAAAAAAACGGAGGGGTGAGCCAGAACCAGCCTGGTTGGGAGGCTGCTGCAGACCCCAGGGAACCATGCCAGTGGCCTGGACCAGGGTGGTGGCAGTGGAGAGCAAAGGAAGCGGAATGTGCTCAGGATACATTCTGAAGACCAAATAAGCAGGCTTTGCCAATGCTTTCCTGTTGGGGAATTGAGGCAGGGAACGAGATGCCTTCATGGGTTTCTGGCTTGAGAAACAGGTCTCTCTTGGTTCTTCTAAGGGGATGCGATGTCATGTTCCCCACTCCCAAGTGAAAGTTCAGGCCCAGCTAAGGAGGGGCTAGTTCCTAAGTCCACCTGCCTGTCTGCAGAGTTACAGAGAATCCCAACTCTAGAGCCAAAGCAAGACTATTTTGGATGTTAAAGCAGTACAACCTATTTTAAAATTTAGAAATACCTGAGTTAGAGGCAGCTCCCCTCTGACTCCTGGTGCTCTTCCCCAGAGCTGTGGCCACCTCATTCTGTACTCAGCATTTGGGACGTGAAGAATCACCTTGAGACTGAAAACATGAGAGATGAGCCTCTGATGGGTCTCAGAGCTTGGACCATGCCAGAACCTTGCACCACCTTCATTTCTGTGCCCCCCGGCCCTGAACTCGTTGCTGATTAGTGTGGAAGGGAACATTCTTCAAGGCCATCCCACACTCATCATTGCCAAGCTGAGAGGGAGCCCAGCTCTGTTCTAGGCACAAGGAGATGGGAGGCAGACACGCTCTTTAGGTACAAACCATTCTCAGAAAGCAAATAACTGTGTCCTGAGCCCCCAGGAGTTAACATTGAGCAGAGTGATGATGGGGCTCGCTGAGGAGAATGAATAGGCAGACCTGTTACCACTGATGTAGTGACAGGTGCTGTGAAGGCCACCAGGTATGAAGGATCAGAAAACACTTCCCTGAGGTCTGACATTTAAACCTAGACCTAGAAAGCAAGCAGCCAAGCTGACACATGTTTAGGGACAATCATTCCCAGCAGAAGGGATCCTGGGGCCAAAGTGAGCTGGATGGTTGGGGGCTGGAACACAGAAAAGGTTTTTAATGGGTTTTTAAAAAATCTTTTTCATTTCCTAAATTATGAAAATATGATAACACATTTACAGGAGACTTGGAAAATACAGTACAAAGTTAAGATTTTTATTTGGAATTTCAGTTTATAGAAGCATTTTGACAGCACTGTGGCAAAGCACAAATAAGATATGTGGCCTAGACTGAATGGTGACTGTGGGGATGGAGAAGAGGAGATTTAGGACTTAGGTGAGAGGTCAAGGGCGAACTTGGCTTGAGCTCCTGGGTGGCTGATAGGCAGGCCATTGACTGAGGTGAGAAAGCTTGGAAAGGGAGTCCCTAAATTTAGCGTGGGTTTGCAGTGAAGAAGCTCTGTGTGTTTATGTTCATATGACTCTCTCAAGGAGGCTCAACAAGTTTATGGCAGAAGTGGGTCTACAACCCCAGTCACCAACAACAGCAGAGCTGGGATTTGAAATCACATAGCCCAACTCGAAGGCCTCTACCCTTACCCACTCTGCCATACCACCTCCCAATAAACAGTAACAAAATTATAGCTCTAACACTGATGCTCTTAGTAGTTCTAGTAACCGGCACATCCAGGGGCTGAGCTGCCTTCAGGCATGTGGTCTATGTGAGTGGCGCCCTCTGGAGTCAAGACTTAGCACCTGAGGTACCTAATTTTATCCTTGGGCCGAGAACGCAGCTCTCACAAGCAGCCAGGCTTATTATTCTCAGATTTCCAGGTATCTGGTGAGCATTAAGGGCCTCTCTGAACACAATATGATTTTCTTATTTCCCTCTCAAGACGTGCCAGCTTGGATGGTAGCTTGTCCCTTAATGAGGCATCCCGCAGACCACCACAAATAACCAACACATTCCTTCATCCTCACTTTTCATTTCACTAAGGTCCCTCAAACTACCTCAGTGGGCATACAGTTGAGGTCTCCCAAAACAACAAGCATTTAAACCAGACATTTTACAACCGACTTCCCAACTAGGGAAAGGGGAGTCCTGACCTTGCCCCGTGTGGACTCTGCCAGTTCCACACATTAGGGCCACTCACTTGCAGCACCCCATATTCTGCCTTGTTCTGGGTGGTCTTGGTGGCAAGTGACAGATACAGTCTCTCCTGGAAGCCTGTATCCCTTCCTATCTCTCATCTGTGTTTTTCTCAGCTTGCCTTTATTCTAATGTGGGTTTTTGCCACTTGACGGCAGCAAGGTCCTTGTCTGTGAAAGTCATTCAGTCATGTCTGACTCTGCGATCCCGTGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGAAGTCTCCAGGCAAGTGTACTGGAGTGGATTGCCATGCCCTTCTCCAGGGGATCTTACCTGATCCAGGGATCGAACCTGGGTCTCCTGCACTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGCAGATGGTCCTTAATCCTTTCTATCCCAGTATTCACGTAGCAGATCTCTGGAGGTCTCTTATTGGTCCTACTTGGGTCACACGACCAGCCTCAGTTTAGCCCCTGTGAACAATGGCATGGGAGATGTGGCATGGAGATGTAAGGCTGGTAGGATCTCAGAGCTTTTGCACCTGTGGTTGTCTCCTTTGCCTGGAATGCCTTTTACCTAAACTTTTTTAACGGCTGTCTCCTTTTTCATTGTTAAGATCTTGGTTTAAATGCACGGCCTCAGAAAAGTCTGCTTTGACATCAGATTTAGTCATTCCCCAGTTACTGTGTATTAGTCAGGATTCATGTTCAGTAATTATAACAAAAGCCAAAATAATGATAGCTTAAGATGGAAATGTGTTTCTGAGTAGTCTGGGCTATATGGTCAGCTATATGGTGTGGGGGGTTATGGCCCCTGCCTTGTTCTGTCATCAACACATCTTGGCTTCCATCTCATGATCACAGTTGGTGGATCCATTTCCAACCATCAAGCCCTCTTTCAGTCAGCAGAAAGAGGAGATGAGCAAGTAGAGGGCATGACACCTTCACAAGGGCACAACCCGAACGTTTCACACGTCATTGGCCCTTGTCTGAACTTAGTCCCATGGCTACACCTAGTTGTATAAGAAAGGCTGGAAAAGAGTCTGGTGGGGCAGCCCTGTGCTCAGCTAAAACTTGGAGATTCAATTACTAAGGAAGATGGAGAGATGGATATAGGGACAAATGGCCATCCCCACCACATGGAGTTTTTGTAATGACAGACACAGTGGCCAGAATATCAAAGAAGTCTTTAGAGACCATCAGGTTAAACACTAATTCAGTAGATGAGAGACAGACTCAGAGAGGGGACTTGTCCAAGTTCACACAAGCCGGTGTTAGACCAAGGCTGGATCCATATCTCCTAACTCCAGGCCCACAGTGCTCAAAACTAGAGGAGGGATTACAAGGTGTAGAGGAGAGAGATTGCATAGGACTTTATCTTTTATGTATTGTCTTAGCTTCAAGTACCTTTTTGTCTTCATGTATTATGTCTAACAAGAATATATTCATGTGTTATTCATGTAAGTGAACACTTGGCCAATATACATGAAAAAGTATTATCTTCACTACTTAACAGAGAAAATCAAATTAAAACCATAATGAGATGCCACCATATATTCATCAAAATGCCAAAAATTTAAAAAAACATAGACTGCCAATTTTTGAGAATGTGGAGCAAGTGGAACTCTCCAGCATGATTGGTACAACCATTTCAGAAAACTGGCCCCATCTACTGAAACGACATACACATACCTATGGCCTAGTGATTCTACATCTAGGGATTTACCCAACAGAAATATGTATGCATGTGACCAAAAACATGTGTTCAAGGATATCCATAGAGGGCACTACCCTGGTGGTCCACTGGCTAAGACTCTGCGCTCCCCACCCAGGGAGTCCAAGTTTGATCCCTGGTCAGGGAGCTATATCCTGCATGCCACAACTAAAGATCACCCACGCCACCGCAAAGATCTTGAGTGCCACAACTAAGACCTGGCAAAGCCAAATAAAGGTCTCTCCTGGCAGTCCAGCGATAAGACTCCAGGCTTCCACTACAGGGGTCCCGGATGCAATCCCTGGTTGGGGAACTAGATTCCATATGCTGCTGCATGGTGTGACCAAAAAAAAAACTTAAAAAAAAAAACAGCCAGTATTGTGACATGCCAGGTGTCTCCAGGAGCAATCACTAGGCCAGAATCCACACAGGGGAGATGAAAGAATGAAACCATCTAGGAATTCCTGTCATCTGCCTTAGGGAGGAAACTGTATCAATGACATGGACCTATTTTTGAACTGGGTAGTTAAAAAATTTTATTTCAAAATGGCAGGACTTATCATTGGCTTTCCTGTGACTCTCAAGGCTCCCTTCTCTGCTGAAAAACTTACCTGAGCCAAGCTCTCCCTTGCCGGCCAAGGTCTGTGACTCTGAACTTTGTATTTCCTCCCAGGCCTGAGACCAATGAGGGTGAGGCAGTTCTGAATAAAATCAACAGAGCAGCCTTGGAATACAGAGGGATGTTTTGTTTGAAAAACAAAAACAAAAGAAGTAGAGGGAAGAAAGGAATAAAATCGCATGAATGTTTGTGTGCTAGAAAATGGTCTGTTAGCATAAAAACCCAAACTGCAGCAATCCCTGGGAAGTGGTTGCCCAATGGAGAGGCCATTGCTCTTGCTCAGCTGTACTTATCCTTAATCTTCGCTTGGTTGCCCTTCGGATCTTTGCTCCCTGCCTAACTGGTTCATCCAAAGAAGTCTCCTGTCACTGTTCATGGAACCACTGTTTTCTGCCTCCGTACCTCTTACCACCTGTGAGATCTTATTTACTTGATTTTTTTCTGCCTGCCCCTGTTCCTTGAAGGCAGAAACCCTGTCTTGTTTCTCATTGTATATATCCTCAGTGAAGAACAGGGTGTCAGACATAGAGCAGATAACGTCAGCGCAAAGTTAGTGCCCTCAATAAGCAGTTAGTGAATGAATGAGGTTGGGCTGTTGCTTTGTATTTTAAAGATTTTTGAGATGAGCATGACTACTTTTGAAGTAGGAGATACATGGGCTCCTGGGCCAAACAGCTGATGTTCGTCAAGTGGAATGACACTGAAATTTTATCCTCAGCCAGATGAGAACAATGCCTGATTCCCTTCATCCACCAAAATGGAAGAAATGAACTAGCACTGGGGAATTTGTTAAACAGAAATGGAAAAGTGGGGTTTTTTTTACTGCTAACAACCAAGGGAAGTGAAGGAATGAGTAAACGGCTATAAAACCCCCAAGAATAGGCCTGGAATAGTCCAGCGATTCTAGTTTTACTCTAGCCGTTTCTAGTGCACACAACTAGACTTCCTTCACAAATTTAATTCCTTAATCACTCTCTGACTATCTGTGAATTCTATCCTGCACCTGGCATTCTTTTCCCCTACACACCCTTGTAACTCCCTTGGC EMBV3_19084 CTGCAGTAGGCTCCTTCCCCAGCATCCATTACCCACTCTCCACCAAGTGATAAAAGAAAC Gene BVT0102_093087 + 1 EMBV3_11912 GK000007.2:51880522-51888628 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40105 CCTCAGGGCTTCCCAAGGATATTCAGCCCCCATACCCACACTTCAACAAACACGTCAAGT Gene GeneID:539203|DVL3:XM_002684877:84_cdna Constitutive 0 NULL GeneID:539203 1 GENE DVL3 NULL dishevelled, dsh homolog 3 (Drosophila) EMBV3_15263 CAGGTTCTGACCACAAGCAGGGATGTGTATAAATTAGTCATCTGTGTAGCACTGCATCCC Gene BVV0102_060855 + 1 EMBV3_11685 GK000016.2:55527456-55553538 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073239 1 XLOC_045005 NonCoding TCONS_00073239 XLOC_045005 NonCoding NonCoding - 16:55545378-55546303 - TSS55083 925 1 TCONS_00073239_1 39 1 0 0 5.43159276679186e-05 0 0 0 0 0 0 0 0 2.47479485667529e-06 0 0 0.000122049799749538 0.000786758271557014 5.71061206786132e-05 0 0 0 0 0 8.02233663009822e-06 4.9589548014109e-05 0 0 0 0 0.000259599137587342 0 0.00117644794300459 0 noncoding 0 0 0 0 -0.0260993369434305 0.82270906822249 0.032108949090163 0.561817251267206 GCAGAAACACTGGGCAATCTCTTTCAGTAGGCTGACCACAAAACACATTCCTCAAACTGAAGTACTCCCGAACAACTTTAGGAAGAAACAATTTACACTGCAGTGAAAAATACAGATAGCTTTGGGCATCCCAGAAAAGTATGAAAAGGGGAATATACTTAGCTAGAATACAGTACTTGAGAGGCGGCCACTAGGGTTAAAAAATAGATATTTTCTCAGGTTCTGGGATGCAGTGCTACACAGATGACTAATTTATACACATCCCTGCTTGTGGTCAGAACCTGTATTTCAGAATAGATGGAAGAATGACGGAGGCAGCATTCCCGCCAGCAAGCATGTGACGCTAGCTAAGGCATTAGGCGCTTGCGCCTCTGGGCCGCTCTCTGTCCCCCTCCCCAGAGCAGCCAACACACCCCCGGAACACTTAACAAACGCACTTGGTGCCAGCACCCTAAGGCACTTTAAGGTTCTGTGCAAAACCCCACGTCCCACAAGTCGCTGTCCGGAAGGAGCTTGTAATCCGGTGGCATGAGGTCGCCCGCGGCATGCGCAGAACCAGTGACGGCGTGACTGCTCCAACAGGACAGCGCGGGGAGAGCCCTGGACGGGGACGGCGCACACCCAGTGCAGGTGAGTGCTGTGGCCTGTCTCGCCAGTGGGAGTGAGAATGATACACATTTTACGTTGGGCAGTCAGGGCCAGAGAGCAGGCGCAGACTCCACCCTGGCACGCTTCCTAAGTTCCTCACTGGGTCTGACGCTCTCACACCCTCAAGTCCAGCGTCCTCCTAGGAGGACCTCAGTCTTGCGGCAATCTTCAAAGGCTTTCCTCGTTCAGTCGAAACCACCTCCTGTCGCTTCTGAGCCCCTCTGGCTCCCACACCCCACCCCCAGCATTATCTCTAGACCCAGAGTCACTAACTCTG TCONS_00067648 . 5' 7197 TCONS_00067648 . 5' 7197 EMBV3_22199 GGTCTGAGTGACAGGGATCTATTGAAACTACCCACACAGGCATATGGTAGGATTGTATCC Gene BVV0102_099853 + 0 NULL GK000003.2:3865787-4227488 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171786 TCONS_00171782 TCONS_00171780 TCONS_00171783 TCONS_00171784 TCONS_00171781 TCONS_00171785 1 XLOC_103914 Coding TCONS_00171780 XLOC_103914 Coding Coding PBX1 3:4223303-4279010 j TSS128067 5786 1 TCONS_00171780_3 208 0.00708606982371241 6 0.89624097942771 1.00014961534795e-16 1.38499261043549e-07 6.18965244827025e-09 2.53364521168899e-05 9.51537399160092e-07 2.62297655037656e-40 2.25338136373037e-21 5.24947328040553e-27 4.42822426984917e-15 1.02222085566825e-05 2.46401907941035e-36 5.5003319968177e-21 0.000159306855584364 6.5555396718585e-23 5.35868450135797e-16 0.000346213946523938 1.82006855496125e-11 3.0999485690567e-08 0.000257239314228965 5.41189967511201e-38 2.25791847809773e-05 0.000507633523972151 1.61559888062726e-05 0.000162412130022734 0.000287447116107761 1.44746293842192e-31 0.000144093316412939 5.61080206922998e-07 0.000116357357506814 1.81457649361719e-44 XM_005203440.1 PBX1 PREDICTED: Bos taurus pre-B-cell leukemia homeobox 1 (PBX1), 0.0 1.019e+04 100.00 0.976494987901832 NM_002585.3 PBX1 Homo sapiens pre-B-cell leukemia homeobox 1 (PBX1), transcript 0.0 4917 79.04 0.975803664016592 TCONS_00171780_3 sp|P40424|PBX1_HUMAN PBX1_HUMAN Pre-B-cell leukemia transcription factor 1; 1e-142 409 100.00 0.942307692307692 2 coding 0 0 0 0 0.00861156375215755 0.945014226581755 -0.0361418510433932 0.531798828315117 ATGACCTCGTTTCTCCATTCCTCTCACCGCATGAGGCGGAAGAGACGAAATTTCAACAAGCAAGCGACGGAAATCCTGAATGAATATTTCTATTCCCATCTCAGCAACCCTTACCCCAGTGAGGAAGCCAAAGAGGAGCTAGCCAAGAAGTGCGGCATCACAGTGTCCCAGGTATCAAACTGGTTTGGAAATAAACGAATCCGGTACAAGAAGAACATAGGTAAATTTCAAGAGGAAGCCAATATTTATGCTGCCAAAACAGCTGTCACTGCTACCAATGTGTCAGCCCATGGAAGCCAAGCTAACTCACCCTCAACTCCCAACTCAGCTGGTTCTTCCAGTTCTTTTAACATGTCAAACTCTGGAGATTTGTTCATGAGCGTGCAGTCACTCAATGGGGATTCTTACCAAGGGGCCCAGGTTGGAGCCAACGTGCAATCACAGGTGGATACCCTTCGCCATGTTATCAGCCAGACAGGAGGATACAGTGACGGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCCTTCATCAGTGACCTCCCCTACAGAAGGCCCTGGCAGTGTTCACTCTGATACCTCCAACTGATCTCCCAGCAGTCGCATCCCGGCTGACCCTGTGCTCCAGTCGAGGCAGGGCCAGGAGGGAGGGTTTCTCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACACTTCTTTATACTCTCTTCCCCCCTTTTTTTTTTCTGGGTAGAAGCCACCCTTCCCTGCCTCCAGCTGTTAGCCTGGTGTCCGTCATCTTCCCCGCCCCTTTCCCTCTGTCCTAGACTCCCTGGGTCCCTGCCCTCTCTTACATCCCTGAAGGATATTTTCAACAATTCTAGGAATTTAAAGAGGAAAACACAAAGAGCGTAATAAAAGCATTTGTATATTTTCCTGCTGGTGGTCTGAGGAGCCAGATTTCCCTCCCTTGGTCCCTCCCTCCCTCTGCTAACGGGCAGCCCTTCTCTGTTTCTCTCGTTTACTCTCACTACCTCTTGGCAGGAATACGCCACGTTGCCCTGCTCGTTCCAGGCCACCCTGCCTCTTCTTGCTCTTCCTTCCCTGAGGACAGTACTGCTTAGGACACAATTCCTCCTCTTCCTTCTCGCCCCAGGTATTCACTGGGGGCTGTCACTGCTGGGCTTCTGCAAGTGCCACAGTTTCTGGTTTTACCCCCACCAGGTTGATTCCCAGGCAGGAAGTCAGGTAGCAAAAGAGGGCTTGAGGAGCAAGAAGGGCAGGATTCTTAGAGGCTTTTGCATCTTTCCAATGACAGCTCTTGGTCTCAAGAGGCACAGTCTTTGGAGACCATGCTATAAGCAATGTTCAGCGCCTACTACAGAACCAGGTCTGAGTTAGGCATGGTGGTGAACGCATCCCTAAGGAGCGGAAGGCTCTTATCCTGCAACCCTTCACCTTATCCCACCCCTCCCCCCACACACACAGGTATACGAACATGTAGACCCGTGCACAGACACACATTCACTTGCCCCAAATCAGTCACATGCCACATATGAATACCTATGTTAGTAACCATAACATTACACCTTGTGAGCGCAGGAGAGCAATACAACCACTCTGAGTGAAGGTCACTGACATAGAGAAGCAGTATGTGCCTGGGGCTTCCGGGCCCCCAGCATGCACACACCAGAATGACATACACAGGACTTGAACACGGTGAAGCTTAGTTTCCTAAACCGTTGGCGTTCCCACCGCCTCTGGAGCTCTTGGGGAGCCACACACAGTACTTCCAGTGTCTGCAGTGGATTTGGTTCTGTTTCGTTTTTGTGTTTGTGTTAGGGACAGTGCATTAATTATCCAAAGTGTCATATGGCACCACCTTCTTGTCCTGGAGGAGAAAGTTGTTTAAGAAGATGGCTGAGACAAACTTTTTGTTTACTTATGCAGAAGACCTGAGAGTGATGGGGAACAGGGAGGTCGTGCTTTTGGTTAAATCATTTGTGATTTTTATTCCCTGGGAATATCTAAGAGTGAGGAGTATGTACTATTACACTGTTTTCTAATTTTACCTGAACTTCGTAGCCAACTGTGCCAGAAGAAAAGATGGCAGCTCTGTTACCTGGTTAAATGGGAAGTGTTCAGGTCTCTTGGTGCCTCATTTTCTTCATCTGTAAAATGGGGGTTATGCCTGGCTCACCAAGAGACTGAAGAAATTGATTTCATTCATACCCAATATATAATTGTGAAGTCAGGGGAAGTAGCTTCCCTAAGATAAACTGGCCCATGCCCTGTTGGGAGGATACATGGTTTTCCTGTTGTAACTTTCGATTAGCAGTAATGCCTGAGGTCGTCACCTTGAGGACAAAGAGCAGAGTCAGTGTTGTTGCTTCTCTTTGTTTGTTTAGGCCTGGCTGGTTTCTTAGAATAGAGATAAGTCTCTAAATTGGAAAAATGTGATCTGGTTCTCTTAGCTTGTACTAGAATCCAACATGTGGCCTCATAAGCACTTAGTCCCCTGTTGCATCTGCTGTGTTTGAGAAAGCCTCTGGGAGAGGTATAAAGCCCTGAGGGGTGGGGATGACCAGCTAACAAGGTCATGGACATTCTGCATGGCACTACGGTAATGATTAGAAAATGCTCCTGTGTGTGGGTGTTGGGAGGTAGGGGAAAGCAAGCAGAAGGTATGTGTATTTGAAGGAAATGCAAAAAGTAAATATTTGGCAAGATGGCATCATACCTGGATGGCTAAGAGGAGTAGGAAGACTGTGTCTTCTAACCTGTGCCATAATCAGAACAGAGCTTGATAAAGAGGCTTCCTGGAAGGAACCATCTTGTGACCATTCTGCAGTGATTAGAACCAGGGAAGAACTTGGTCTGAGTGACAGGGATCTATTGAAACTACCCACACAGGCATATGGTAGGATTGTATCCCCTTGACTTGAGGCAAAGTACTTAAGAGACACAAAAGGGTTCTCTTGGAAACAGGAAGGATGATTGCAGATTTGGTTTGAATGATCACCATTTTAAGCTGATGAAAGAGATCAGAGTGGTGCCACCTCTGCACAGGCAGTTTCTCTCCCTGCAGTAGTTTGCACTGACGCTCACCCCTCACTGTGTCGTCCCTGCCCAGCTCGTCACACGGTGCTCTTTACCTTCCCCTCCTCACCCATGATCACATCGGACATGGCGGCCACCAGCTCTTTTTGTATTAAGGGAGGCATGAGAATGCTGACCGCGGAAGGTTGGGTATGGAAAGAGCGCGTCTCTGGAAATACAGTTCCCTGGGAATTCTTACTAGGTCAGTCATACAGATACCAAAATGTGCCCCAAGATTCCTTCATTTTCTGATGGAAGTGGGAGTACCCCGTTTTCCCCGCAGCCGACTTCCCCTGAGAAGTAAAACTCGCCCTAAGGCTTGCCCACCTTGTGACTCTTCATCACACCCTTCTTTTCATCCCTAACTCCTCCCCCTGGTGTGGAATTGACTCCTGTGCAGTAGTTTTGCCAAGTGGCACCTTCTTTACTTTTTTTTTTTTTGCTGTGGTAGTGTTTTTTATTTGCCAGTTGCCTTTTCTCACGTATCTTTCCTTGCCCCCCTTGCCTTCTGAGTTTTATTTTTCTGCCCAGAAAAACCTGACTTCGATACCAAAAAAAGATGAAACTACAGAAACTCAAATTTAAAAAAAAAAACTTAAAAAAAAACAAAAAAATACTCAACGATTCTTTCAGCTTTATTAACATTTTCCATTGTTTCTTGCGACTTGTGTCTCGTTCTTTGTAGTATTGATGATGAACATTTGATAATGAATGTTCTTGTATATTCAGATAAAGAAAAAAAAAACCAAAAAAGCGGTCTGAATTTAATAGTGTTTATAATAAAAATTTTAAAAATGACCCTCTTAGCACGCAAAACAGGATGGGGAATTTCCCCTCTTCTTTCTGTGACAATGCACATCATTCCTGCATTAGTTTTTAACACCCAACTACCTACATTCACCATTTCCCCCATTTTTCTTTTATTTTCTTGCATTTGTGAATTAGTTCAAGAATGCTAGAAAAGTGTCGAGTTGTGCACATCCATTTCCTGTTTCACAATGTTTAAAAGTGACAGTAATTCATTTTGTAAACTAAAAAAAAAAAAGTTTGGAATAGTGAGCATAATAGGTACAGCCTAACATGTTATTATGTTTATTAACTTTGAGACCCAGAAATAAATTCTTTACTTTTCTTTATCCTGCTCTTTAAACTATAAAAAAAAAAAAAATTGTGTTATTTTTGGTTTGTTTATGGGAGGGTGCTTTTTTAATTTTCAGGATTATGATCTTGGTGTTTTTATTTCTTAAATATGTATCCGAGGTGATGTGAAAAGATGACCTTTGTAGAATAGGCTGTTTCCATGTACTTCTGTTTGCTTCGGAATTCAGTTGACTTCAAAGACAAGCCCCACAATGACGTCACATGACTCACCTGTAATTCTGGACTGTGGCATTCCAAAGTCCCTGGGGAAAAAACAAATGCAGAGACTTGAAGTTGCTTTTTTCGACCTTTAACACTTCAAGGAATTGGTCCAGGGTAACTTTTTATATTGTAGGGAGAAGTTTTTGCCTTCGTTGATTGTGAATGTCACATTAAAATGCTTTCTTTTCTTTCTTCCTGATTGATAACAACTTTCCACAAAGCCTTTCCAAGTAGAGAGGATTTTTTTCTTCCAGAGGAATTTCACAGGAGTGAAATTGTGTACCATTTCACTGGTGGGGTGTGTACCATTAGCTGAGGAGACTAGATCCAGGAAGCTGTCCCGAGAGCCGTTCAGCCCGGAGGTATTTTCAGCCAGACTCAGTGCTGTGCCCCAGTGCTGAGCGGTTATGCTGGTCTCATGGGCAGTGCACCTCTCGCTAACTTCTGATTTAGGCAGCTGCTTAAAGCAGATTGTCAAACTGGCTTGATTCGGAATGTTTTTGTTAAGTTAGGGGAGAAAAGAAAGCAATGTTATCTGGAGAAACTTAATTTAAATGGTTTTCATTCCTCAAATGAGTAAGCATTCAGAAAGCAGCCAGAACCTAAGCAAAAAAAGTGAGCAACACTTTAGGAAGTGTCTCTACCCTAATGCATGCGCTCTTGTTTTTAAGTCATAACAAAACAATGATGACGACCTTTTCACATCATCTATATGATTTCAATCCCTAGCTCAAAGCTTTCTGGACTCTTTTATTTTTTTGTAAACATTTTTTTTTCCTTTTGTTAAAATTAATAAAACATTCAATGTTTTCCCCTTTTCTCTCTTATTCCTTTCTTTCCTTGGGCGTTTTCAGTTATTTTGAAGTGCTTTCCTTTGGATGTTGGTTTTATTCTCCCACTCCTCCTCCCCCGTTCTTATTATTCAGAGTATAAACCTGCAAAGCTCTGCTCTGTTTTGGTTTTGAAATTTTAAGCTTTTCTGCTTCTGTGAGAGCACAGGCTTCTGTCCCTTTTGATTCCAACTGAAATTTTGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTACTGGTAATGCATATTCCAAATAAATAGTTTCTTTTGTTGCAAAAAAAAAAATATATACTTGTATTTGGTGTAAATTTATTTTCTTACCTGCTGATAACTTCTCTTTCCCCAAACTATGATTTAGTTTAATGTGGATTATAATTTAAACTGTGGCCC EMBV3_24196 CAACCCCTGGACGAGAATGTGGGAAATGTACCAGGCCGGAGATTCTTGAGGAACAAGCTA Gene GeneID:539800|TNFSF4:XM_002694025:18_cdna Constitutive 0 NULL GeneID:539800 16 GENE TNFSF4 NULL tumor necrosis factor (ligand) superfamily, member 4 EMBV3_26427 CCACAGCTATACCTAAACCTCAGAAGTGTTCCCGATTTGCATACTCCAACAATCGAATAT Gene GeneID:613578|UBXN2A:XM_002691467:329_cdna Constitutive 2 NULL GeneID:613578 11 GENE UBXN2A UBXD4 UBX domain protein 2A EMBV3_19994 TTCCACAGGCATTGCTGAATTCTGGATCAACGGGAAGCCACTGGTGAAAAGGGGCCTGAA Gene GeneID:514488|APCS:NM_001034466:272_cdna Constitutive 0 NULL GeneID:514488 3 GENE APCS MGC127839 amyloid P component, serum EMBV3_08952 GAACTGTTGTGAAGCAGGTAAGTTCTGTGCCCATGTGGCTAGGCAGTTCACTTTCACATC Gene BVV0102_111697 + 0 NULL GK000013.2:35368127-35533548 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045064 TCONS_00045069 TCONS_00045067 TCONS_00045068 TCONS_00045065 TCONS_00045066 TCONS_00045070 TCONS_00045063 1 XLOC_026340 Coding TCONS_00045069 XLOC_026340 Coding Coding MTPAP 13:35528589-35564598 j TSS32976 7163 1 TCONS_00045069_3 334 0.111824654474382 9 0.801321928460342 3.04327809788918e-07 0.000157377197946664 0.000157607089155977 0.000128811505533339 0.000161767963866848 5.91128425673578e-11 4.87449248864142e-05 0.000213786870404396 6.15715560235108e-05 8.92056627822884e-09 6.5187917604465e-13 9.03506958861389e-06 2.70485202515352e-08 1.141442158493e-08 6.22070145254647e-07 9.06283228494916e-05 7.67402992119342e-09 2.53291267429557e-05 1.57877052884486e-10 2.41244734194808e-08 4.46679654283541e-07 8.76747059010098e-13 1.12151219317378e-08 1.86216764134301e-08 3.09555267465537e-11 0.00015649855520321 4.8691286743625e-05 1.50896294368226e-11 4.22248204824339e-06 5.06004035968353e-09 XM_588743.7 MTPAP PREDICTED: Bos taurus mitochondrial poly(A) polymerase (MTPAP), 0.0 3887 99.54 0.303364512075946 XM_005252486.1 MTPAP PREDICTED: Homo sapiens mitochondrial poly(A) polymerase (MTPAP), 0.0 1887 81.75 0.268462934524641 TCONS_00045069_3 sp|Q9NVV4|PAPD1_HUMAN PAPD1_HUMAN Poly(A) RNA polymerase, mitochondrial; 0.0 575 83.38 0.997005988023952 1 noncoding 0 0 0 0 0.0561534201116981 0.670665844391909 0.00990947201815606 0.840305542577782 CGCCTCAGCGCGCATGCGCGGAAGCCCGGCGCCCCTTCGTTCGTGCTTCTGCCGCTTTGACAATGGCGGCTTGCAGCGTGGGGCTGTTGACCCGTTTGTCCCTGCGCGTTCAGAGAAGCCAAGTCCAGCGCCCTCTCCGCAGGCTTCTCAGTTGCCCAGGAACGGTGGCCGCAGACCTCAGGAGGGAAGAGCAGTCCTCGGGGAGCGCGGAGACAGGCTCTGAAGACAGGACTCCAAAAAAGAGATTCTCTGAGGTGCAAAACGAGAGACGAGAGCAGGCCCAGCGGACTGTGTTGATCCACTGCCCAGACAAAATCAATGAGAAGAAGTTTCTCAAGTTCTTATCCCAGCACGGACCTATTAACAGCCACTTCTTCTATGAAAGTTTTGGTCTTTACGCTGCTGTAGAATTTTGTCAGAAGGAAAGTGTAACTTCGTTGCAGAATATAACCCGGACTCCAAGCCTGGGCCCAGAGGCTGCAATTCCATTCAAGTCACGTTATTTAAATTTAAAATTGAGAAATTCATTAAACCAGACTTCTGAACTGTCAAGCATTCAATGTAGTAACCAGTCTTCTCCTTCAAGCAAGAAGCTTTATCAGTTACTTTGTTGTGCAGAAAGTCTAGGTAGATGATCAGCTGAACACTCTCTTGAGGGAATTCCAGCTCACAGAGGAGAACACCAGGCTTCGATATCTCACCTGCTCTCTCATTGAAGATGTAGCGGCTGCATACTTTCCAGACTGTGCAGTCAGACCCTTTGGCTCCTCAGTGAATAGTTTTGGGAAACTAGGATGTGATTTGGACATGTTTTTGGATCTAGATGAAATTGGAAAATTTACTGCTCAAAAGACCTCAGGAAATTTTCTGATGGAATTTCAAGTGAAAAACGTTCCTTCGGAAAGAGTTGCAACTCAGAAGATCCTGTCTGTGATAGGAGAGTGCCTAGACCAGTTTGGCCCAGGCTGTGTGGGAGTCCAGAGGATCCTGAATGCCCGCTGCCCGCTTGTCAGGTTTTCACACCAGGCCTCTGGGTTTCAGTGTGATCTGACTACTAACAATAGGATTGCCTTGAAAAGTTCTGAACTGCTTTACATGTATGGTGCCCTGGACTCGCGGGTTAGAGCCTTGGTGTTCAGTGTCCGATGCTGGGCTCGAGCACATTCGTTAACGAGTAGTATTCCTGGTGCTTGGATTACAAATTTCTCCCTCACCATGATGGTCATCTTTTTTCTCCAGAGGAGGTCACCTCCTATTCTTCCAACACTAGACTACCTAAAAACCCTTGCAGAAGATAAGTGTATAATAGAAGGCCACAACTGTACATTTGTTGGCGACTTGAATAGAATTAAACCTTCACGAAACACAGAAACACTAGAATTACTACTGAAAGAATTTTTTGAGTATTTTGGAAATTTTGCCTTCAATAAAAATTCCATAAATATTCGACAGGGAAGGGAACAGAACAAACCAGAATCTTCTCCACTGCACATTCAGAATCCTTTTGAAACTTCTCTCAACGTTAGCAAAAATGTAAGTCAAAGCCAACTGCAAAAATTTGTGGATCTGGCCAGAGAAAGTGCCTGGATTTTACATCAGGAAGGTAAAGACCGCCCTTCGCCATCAAGTAATCAGCCTTGGGGGTTGGCAGCCCTGCTGCTACCTTCTGTAGCAAATAATATGTCTCTTTCCAAGAAGAAAAAGAAGCCTGCAAGTGAAAGAATTAAAAACTTGTTGGATTCCATAAAAAGTAGCGGTGCAGAAAATTCCACAGCCACTAATGGGAGAAGAGCAATTAGCACTCAGGCATGATGGCTGCTCATTTGCTTTCAGAACTGGTTTTATCCTGTAAGCTGGTCGCTGACTGCCTGGAAGAACTGTGTGAAGCCCTGGCAGGTCATACTTCCATCCAGTGTCTCTCTTCTCATGATCTTCCTGTCGGGCCCTTTAAACTGGTCTGAGATTCTGCTATATGTTCAGTCTGAAGGCAGTGGCACCATATGAAAATGCTAGCCATAGGAACAGGTGAAAGAAGATTAGAATGTACTTCAGATAAAATATACAAAGCAGGTGGGAAAAATCAGTCCTAGAATCAAACCATTGTTGATATCCGCATCAGTCTCTGGGTGTAAATCATTTAAAGGGACTTCTAGGTATGTATATATGTAGGCAATGAATACAATAAAGTTGAGAAATTTGATAGAACTCCTTAGTTTTGTATTCTTCCAAGTATTCTTTCACATATAAATACAAACATATTGGTACTGATTTCCAAAAACGTTAATATTTTTAAAAGAGATGAATATAGGTACTTCGGTTAGTACATTCTAGATATTCTAAGCTAAAAATATAAAAATATTGGTACTGTGTATTTAAAAATATTAATCAGCTTTTCTATCTTCAAAAATAAAATCCTTTTTCTACTAGTATGTGATATTCCAATATTGCTTCAATCTTGTTTCAGAATTCTTTCTCCCTGTGGGAAGTAGATAGTATTGAAGTATAATTTCCTTTATAGTCCCTGTAGAGTGACTGTCAGTTTATGAAGCAAGTAGTATAGTGTCTGAGAACACAAACTTGAGCCAAACTGCCTTCGTGGTGAATCACTGTCTCTTTGGGTCTCGTCTGTAAAATGGGGGTGATGGCAGTGCCTCCTTTGCGGTGGCTGTGGAGATTAGATCAGCCCACAGGAAAGTGCAGGGCCACAGGCAGGCCTGGCATGTAGTACCGTATTTGTAATGTTGGTGGTAGATAGTCATTATTCATGCTACTCAGAACTCAGATTGAGAGATTGTACTGGTTTTCAAAATAGTTTCCCATCTAAATTTTAGGTCAGAAAGTATGAGCCCTGCTTGAGGTCTTATGGGAAGCTCACTAATAGAACTGTTGTGAAGCAGGTAAGTTCTGTGCCCATGTGGCTAGGCAGTTCACTTTCACATCTGAAACCAACAAGCAGGCATCAGTGTTCTATTCAAGTGGCGTCCTTAAACTAAAAGCTGTTTTTCTTTCCTTTTTGGGGTGGGGAGGGGGGCTGCATGCAGCACAGCTTCTGGGATCTTAGTTCCCTAACCAGGGATGGAACTTGGGCCCCAGCAGTGCAAGCACTATGTCCTAACCACTGGACTGCCAGGGAATTCCGTGTTTGTTTTTTTAATTAGGTTAATTCTGTTGGACTAGATATGTGTACTGAGAGCTAGAAAGAGGTTTAAAAAGCATATTCAAGCATTTTTAAATGATTTTTTCCATTCATAAATATTTAACTGGACATATTTCTTTTTTAGGTTGGTGTTAAGTCTAAAATGATCATTTAAAGCACATAAAGCATTAATGTGTATACGTGTTCACATTTCTTTTTGTTTTTATAATTTATAGAATAACTTTGACACCCTAGGTCTGTTTTACTTTGCAGAATGAGGTTTACTTACGGGATGAGTTTTAATTTACATCAGTCTTTTACATGAAGTTTTCTTTCTAGTAAACTGCATAAGGACTACAAACAAATTTATAATGTTTTCTCCTAAGTTCATTGTGTATGTGTGAGTCGTTTAGTTGTGTCCAACCCTTTGTGACCCCATGGATTGTAGCCTGTCAGGTTCCTCGTCCATGGGATTCTCCAGGCAAGAATACTAGAGTGGGTTGCCATTCTGTTCTCCAGGAAATCTTCCCAACCCAGGGATCAAACCCAGGTCTCCTGCATTGCAGGCATATTCTTTGTTATTTGAGCTACCAGTGATGCTAATAAATTCATTGTATCACTTTCCAAATTTTTAAAAAATAGTTTTTATTAATCTTCGGGATAATCAGTAGTTATTTGTCATTGTCATTTCTTAAACTAATTGCAGCAATAAAGGTAAAGAAAAATTTTTAAAGTTTTTCTTTTCTAGCTGTTATGAGGCTTTTAGTCACTAGCTCTCATGAACAATGGGTTTTATTCTCTATGTGAAAATAATTTGATATGAGTTTACCTGGATCACATTGCTTTCAGTGTACATCATTCCTGATTTTATAGCCCACTAGTCTGATTCCTGAGTTATTACCCATTTTTAGGAAATTAGAGAATTGACCAAGCATTCTAGGAAAACAACATATGATCTGTCTCCCTCACAACTTCCAGTTGTCATAGAGAAGAGGGAATAAGACATTTGAAGTAGGACTTTCTTCCTGCTCTCGTTTACTGCTTCCCTCTTTGTTTTGCTCTAGGTTGAGAACAGAATTAGACTCTTAAGTCACCTCTGTTTCCTAGAAATCCCCTGGCCTTAGAAGTACAGCTCTATTCGCTTCCCTACAGCCTGCTGCTGCCGACAGTAGGAAAATGCAGCATTTACATGTGAGTTAACACCTGCGCAGGGAACACCCGCTGCGAAACCAGCAGACGAGCTGCCAAGCAGCCGCGGCTGGTCCGGGTAGCAGCTCTCTGGTCCACCCTCCAGAGCTTGGTGTTCAGTGGTGAGTAGCTGTCTGCTCTCGGTTCATCCCCTTCAGGAAACACTGTAGGAGTGGAATATTCAAAATACTGTAGCAGGGAAGAACTCTTTACTACCAGAGATGATCAGAGAAGGTTTCATCAAGTAGGACGGTAGGCTTTGAAGGGACCATGGTCTCCGTCGACCAGAGGAGAGACATCAGGATTATCGTTCTGGGAACAGAAGACAGTGTGAATAGGTGTCAGGGAGATGAAGTATGTTTGGAGAAGGGGCAGTCCAGACAGGTGGGGTGGAGTTTTTGCTGTGATGCTCAGAGTCAAGGTTTAGAGAGATTGTGAAGGACGGCCTGTGGCAAGTTAGGAGGTTGAGTATATTTTCAGTGGTAAAGCATTGAAGATTTTTGTGTATGAGGGAAATAAACATTAATCAGTTGCTTTTTTAGGTGACTAATCTATTAATAAGTGTAGTTATCAGGTGCCACTCCTTTTTTCTTAGCAAATTTGAGTACTTTAGGTCCCATCGTTAAGTTAGATAAAATTTGGTTGTTAAATTTTTCACACAGGTCCAGAAGCTGACCCTCATACACCTAGCAAGAGTATTTCACAAGAAAGTTAAGACTAAGTGGTTTAAAGCTATTGCACCAGGAAATATCATCAGGTCATGACATATGATTTTATGTAAAGCCTTACTAATGAGAAATTCTTTGTAGTATATACTTGGGAAGGAATGAAAACATAACCAGAAATCACTTTTCACCTTGGGATGATGTTGGAAAATTTATTTTAAATACTTGAAAGGCTTATTTTAGTTTCCATGCTGAGCTCAATTACTTGTGGATACATACTCCAGCAAGTATAAACATTACAGTGTTCCTCTGGAATTCCCGTGGAGCAACTCCCAGAAAATGTCTATTTTAGATGGAATCTTTAAACTGAAATATCTATGACACAGGATATATAAATCAACACAAATTATTTTTAAAATACACTATATTTTAAATGTGATCCCTTATGTTATCTGTGTGTATGTGTATTCCCCCATCTTTTAAGTACTCAGTGGAGTCAAAACTAGGCTAAAGACAGTAGATGAATACATTTAAACCTTTTTATTCACAGCAAAATTTCTAATCTTTTAGGATATGGTGCCAAGATATTTCTAAAAGAGTATTGGAAAGATGGGACTTGAAACAGTAATTGTTACACCGTGAAGAATACATAGGTAAAATACTTAATTTGGAATAGGCCAACTCTAAATTAATGAAAAATATAAGTTATAAATTATCTTTTCTGGGTGTGTTTTGAAGTATGACACATTGAAAACTTGCTGTAATGGATGATGTGAAATAAAATGGAGCAAATTAATGAAAGATTACAAATTAAGTCAGTGTTACATTCTGTGTCACCAGAACTCATTAACGTGTCAGGTACAGTGGAAGTCATCCATTTTGAAACGTCCTATTGCACAGTTCAGTTACTTGGCTTAGGTTAATGTAGCTTAATGATTAGGATTTTAATTAATCTTCACTTAACTTACACATGGACTTGGAGAGTATATGAGATAACATTAATATCATCTCTTTTTATCTCAAAAACTGAGTAAAAGATGGATTATGAAGCTGGCTGATGCCTTACAATGAATTTCTAAATTTAAAAACTGATTTTTTTATTCATTCCATGAAAAATGTGTAAAGAATCCACCTGCAATGCAGAAGACCTGGTTTGATCCCTGGGTTGGGACGATCCCCTGGGGAAGGGAAAGGCTAAAGGGCTTCCCTCATAGCTCAGTTGGTAAAGAATCCGCCTGCAATGCAGGAGATCTTGGTTCAATTCCTGGGTCAGGAAGATCTACTGGAGAAGGGATAGACTACACTCCCGTGTTCTTGGGCTTCCCTTGTGACTCAGCTGGTAAAGAATCCACCTGCAATGCAGGAGACCTGGGTTCAATCCCTGAGTTGGGAAGATCCCCTGGAGAAGGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTATATAGTCCATGGGGTCGCAAAGAGTCAGACACTACTGAGAGACTTTGAAAATGTGTATTACAGTTCTACAGATAAACATATCAGTATAAAACTGACACAAGCTTCCCCTTGCTTTTCTTTTTTAGCAGTTAATTTGGTGATTTTAGAAGGGTTGTTTGTGTATGATTTATGTGAAAATGTTCCCTTTCCCCATGTTCTCTGGTTAAACCTACAGTAAGCATCTTTGAAATTTCCCTGCTTCATTTCTTGGCATCACTGGTTATAAAGCTTGGTTACCAGGACTGAGTGGTCTCCTTCAGCTTTATATCACTGAATTTTTACACAAGAGACTTACAGCATTTCTTGCATATTTTATATTTTTATTTGATCAAAATATTTTTATATTTTGGTTTCTTCACTAAAGAAGTGATGTCTAAGAATAACAGTGAGCAGTGGCACTTCACTTACCTGTTATTAAGTGATAAGATGGGTTTTAATAAATATATTTTTTCCATATATCACTGATTTCCAGAGTTTCACGCTCACTTCTGTATATAGGACTATCAAATCATTATTGTAGTCCCACCTCTAAAACTTTGTCACGCTCACTTCTGTATATAGGACTATCAAATCATTATTGTAGTCCCACCTCTAAAACTTTATCATGATTGTGTACTGGACTTTGTGCTTTACCTCCAATTTGACCTGTTTTAAATTAAAATTATTTTCTTCCTTAA EMBV3_36088 CAGTGTTCTTTGTGGTGGAAAACTGTCACTGAAATAGAGCCAGTGTCCCGGACTATGCGC Gene BVT0102_137882 + 0 NULL GK000008.2:103683905-103709671 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28594 CCCGTCCGGACCCTCCAAGTGGAGACTCTGGGCAGCCTGGTAGATGGACGCATCTTTGAC Variant GeneID:506043|FKBP11:NM_001045932:38_cdna 224^289 1 EMBV3_38044 GeneID:506043 5 GENE FKBP11 MGC134495 FK506 binding protein 11, 19 kDa EMBV3_14461 AAGGTTCTCAAGAAGATCTCCCGCTACATCCAGGAGCAGAATGAGAAGGTCTTTGCCCCC Gene GeneID:767832|GOLGA7B:NM_001076954:255_cdna UTR3_Alt 3 NULL GeneID:767832 26 GENE GOLGA7B C10orf132 MGC142751 golgi autoantigen, golgin subfamily a, 7B EMBV3_22445 GAGTGCAGCCCAGGGGCGACCCCTGAACAGGGAAGCCCTCGCTTCCTCCACGCCTGGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37786 GGTGATGGGAGCAACTGGAGCGGTGGGCAGTTTTGTATTCAGAGATTTATCAACTTTGTG Variant GeneID:507597|NPL:NM_001045978:17_cdna 687^771 2 EMBV3_35584 GeneID:507597 16 GENE NPL MGC137867 N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) EMBV3_36675 TCCGCGGTCATCGGAGGTGTGATAGCGGTTGTGATATTTATTTTGCTCTGCATCACTGCC Gene GeneID:100337183|LOC100337183:XM_002689752:15_cdna Constitutive 0 NULL GeneID:100337183 8 GENE LOC100337183 NULL cell recognition molecule CASPR3-like EMBV3_35124 CATGTATATGAATCCATCAGCAAAGGACAGAGTGTCTTCGAGCAAGGGGGTGGCTGTGCT Gene GeneID:788160|LOC788160:XM_002687609:718_cdna Constitutive 0 NULL GeneID:788160 5 GENE LOC788160 NULL similar to olfactory receptor, family 6, subfamily C, member 1 EMBV3_16462 ATGTGGGCAGGCCTTTATTCTTGGCTCACAGCTCATCGAACACTACAGAATCCACACTGG Gene GeneID:538504|ZNF565:NM_001102216:700_cdna Constitutive 1 NULL GeneID:538504 18 GENE ZNF565 MGC152155 zinc finger protein 565 EMBV3_07597 GCAAAATCTGCATCCGGCAGCTCAAAGGCCATGAACAGATCCTTCAAGTGCAGACGTCAA Gene GeneID:520004|UNC5D:XM_002698730:187_cdna Constitutive 0 NULL GeneID:520004 27 GENE UNC5D NULL unc-5 homolog D (C. elegans) EMBV3_42424 AAATACGTCCCACCACGCTTGGTTCCAGTGCATTCGTGAGCTAAAGGAGCAGTACTCGGA Variant GeneID:539602|NGDN:NM_001046459:234_cdna 573^649 1 EMBV3_26563 GeneID:539602 10 GENE NGDN MGC137193 neuroguidin, EIF4E binding protein EMBV3_39430 CCTTCGAGAAGCAGTTCAAGCGTCGAAGCTGCCAGATGGAGTTCGGTGAGAGCATCAGGT Gene GeneID:618644|DUSP16:XM_002687776:23_cdna Constitutive 0 NULL GeneID:618644 5 GENE DUSP16 NULL dual specificity phosphatase 16 EMBV3_37238 TATCTAGAGACCGGGTCTTGGCAGATGGTCAAGCTCAGAAGAGGTCATTAGGGTGACTGG Gene BVT0102_251317 - 1 EMBV3_39711 GK000004.2:118082233-118124483 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190528 1 XLOC_116563 NonCoding TCONS_00190528 XLOC_116563 NonCoding NonCoding - 4:118085564-118090025 - TSS142896 4461 3 TCONS_00190528_7 107 0.145707240529029 1 0 0.000298891092347338 0.000314225458614423 0.000230260054167897 0.000169396196021331 0.000524596436891298 0.000145135146121678 0.000186938358230768 9.01592986579922e-05 0.000361697103094234 0 1.02630976175919e-06 0 0.000155652746096588 0.000120210023175015 4.28921418350269e-05 3.55233235251483e-05 0 0 0.00030059713747168 0.000396568402449758 0.000223886169542581 0 0 1.50321889557581e-05 9.1634183962443e-05 0.00044537503404531 1.31341568298356e-05 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 3e-40 172 73.55 0.0647836807890607 0 noncoding 0 0 0 0 0.0298120067084226 0.863606475378989 -0.0103436630412612 0.873445462736399 GAGGGACAGGGGAGTCTCGGGAGTAGATCCCAGCCAGGCCTTCAAGGTGCTTGCGTTTTCCTGGAGGGCAGCGAGCTCAGCAAGGGGCACAGAAACCAGCGGTGCAGGGTGGGGGCTGCAGACACCCCGCCTGGACCAGTGGGGTGAGCGAGGCCGCCTGAACCCCCAGAGCCACCCCCAGCACTTGGTCCCGGGTGTCAGCGTGGGCGACCAGCAGATTCTCCTGGGCAGATACTGAGACACAGAGCCGAGAGGGGCCCAGGGTCTGCCTGCATCCCACCACCAAGCTACCTGTCTCCTTTAAGCGGAGCCCCAGCTGATCCGGGGAGTCGAGCCCTTACCCCTGGGTGCGAGGCTGTCCTGAAGAGGGTGGCGCCCCACCCCACCCGTCAAGGAAAGCTCAGTCTCCTGAAGGTGGAAGTGGTGGCCGTTGCTTAAGTCTTTCTTGAAAGTTTTGTCCACAAGACCCCAGAAATGTGGGTGCCGGGCTGGGGAGTGGTGCTGTTCCTCGAGGGGTGGTTGGGAAACGAGCTGAGAGGCCAGAGACGAGCCGCCCCGGTGACCCTAAGCTGGGGCCTGGAGGAGCACAGCCCCCCGGGAGTCCTCTAAGGCTGGAGACCCCGGCAGCCCAGAGCCCCCAGGGGAGGTGTGAGTGCCAGCCAGGTGCGTGGAAAGCTGGCTGGGCTTGGGAGCGAGTCTCAGCTTCAGGCGCCTGCATCTTGCAGCCAGCTTCCTCCTCCCCTCCCTCTCCCACTGTCATGGGCAGAGCTGTGTCTGCCAGGATTTGTGCCCGGCCCCAGCACCAGTGGAGGTGACCTTATCTAGAGACCGGGTCTTGGCAGATGGTCAAGCTCAGAAGAGGTCATTAGGGTGACTGGGGTCCGGGAAGGAGAGGAGAGACCGTCGCCCAGAGGAAGACACGGACGGAGAGCCTCGGGGTGGCAGGCGCAGAGGCTGAGGCTATGTGACTGTAAGCTGATGGTCATCAGCCTCAGCTCTATGTCAGTAGAGGCGGGAAAGGCCCTCCTCAGAGGTTTCGGGAGGAATGCGGCCTTGCTGACACCTCGACTTCAGACCTCTGGTGTCCAGAACCATGAGGAAATGCACTTCTGTTAAGCCCCCTGGCACCCCTGGGCACAACATCTCAGCTGTGCCAGGTGCAGAGACACGGCGTGAGGAAGGCATGGGCGAGGGCAGGGAGAGTCACAGCACGCGTGTGGCTGGACCTCAGAGCTTCCCGAGCGCCGACGCTTGAGCCAGGCTCTGAGGACAAGCAGGAGCGGCCAGGCGGGACCGACAGAGACCACCAGCTCCCAGGAGCGGGCGTTTCCCCCGGCGGGAGCAGCTGTGTCGACGGGGAACGACGTGTCAGCATTTGAGCGATGGAATGACGCAACAGTCGTGTCTTCCATGGCCCGCTTTTCTCAATCGGTTCTCTACCATCAGTATATTCTCCACGTGCTGCGCAGCGGTGACTGTTATAAAAGCTGCGTATAATATCCCACGGAGAAGATGCACCGGAATCTCCTTAACTCTTCTACCCGCTCCTGTCAAGTCGTTTCAGGTGTTTAAAGGGGGGATGATTTAGCCTCACAAAGGATCCTCATTAGCAAAATAGCTGCTTTTTAGATGAACCTGGAGACATCATTGTGTCTCATTCATCTGATCATTCAAGAAATATTAAAGCCCTTTCCCTCTTCTGGGCACTGTACCAGTGCAGGAGTTACAATGGAAGATAAGAGAAGACCACCGTCCTGACCACAACCACTCAGGGTTTGCAGAGGACAGAGGAGTGTGGGTCAGCTCCAGAAAGGAGAGCCTCACGTGCTCTGAGATGTTCCGAGATTAGGAAAGGATGAATTTTGATGTCCTTCCATCTTCCCACACTGCTGGGCTGCCCAATAGCAATGAAGGGAGTGATGTGTGCAGGGCCAGGCCTCAAGGGACATGGAAACGTTCACCTTTGCCCTCTTGGAATGTCTGATCGTCCCGTTCAGAGCCCAGAAGGACTGCTGACCGAGAGGTCACGTGGGGATGGGCGGAAGCCAAGAGCCAGCACCCAGGCCCCAGACCCTCCCTGGGGGGCCACTGCAGGACTCAGGCGCACAAGCGAGCACAGGGAACCTGAAGGCCGCCAACCCACTCCTGCCCACCCCAGGAGGATGGTCGGTTCACAGGCAGGCCTCTGAGGGTGGGAGGGCTGCGCATGGGCGGGTGCAGGCGGCTGGGTGCAGGTGAGGCGTGTCCAGACTCCTTGGGAGAGGGACTAGCAGATGCTAAACGCCAGCGTGAGGTCACAGTGCGTCTGAGGGACAGTGGAAAAAGAAGCCCGTCTACATGCCTGAGCAGGAGCGCATGAGAGGAGTGGGGCTTGTGAGGAGGCCACAGGCTGGGCAGGTCTGTGAATAGGTCACTAGTCTCGGTGCTGCCGGAACGCGTCATCGGTCTACATGATTGTCTGGAGGCTAAGAGAGCCTGAGGCCACCTGGACCTGATGATGGCCACACAGTCCCTGTCCACCACAAAGCCCCTGATGACAGAGAGGAGCTGTACTGCAGAGTATAGTCCTGGTGGGGTCAGCAGAAGGACGTGGGAGCGTATGGGCCCAAGACGGCATCTGCTATGCTAACAGCCGTGCAGTAACTCATAATCCAACTTGACCAGTCTCTTATAAGAGGAACTTCGGGCTTCCCTGGTGGTCCAGTGGTGAAGAGTCCGTCTTGCAGTGCAGGGGACACCAGTTCAATCCCAGGTCCAGGAAGGACCTATATGCCGCGGAGCGATGAAGCCCAAGTGCCACAACTACTGAGCCCGCCTGCTGCAACTCCTGGAGCCTGAGCGCCTAGAGCCCGTGCTCCGCAACGAGAGAAGCCACGGCAGTGAGAAGCCCCACACGCAGCTAGAGAGTAGCCTCCACTCGCCACAGCTAGAGAAATTCCTCATAGCAACGGAGACCCAGCACAGCCAAAATAAATAAGCAAAATTTTAAAAAAGACCTTACTTCCAAATACAATTACATTCATAGGTACAAGGGGGAGGGCTTCAACATACGAATTTAGGGGAGCGCAATTCGGAAATAAAGTTTGTCTCCCAATAAAAAGACATGCCCAGATTGGTTAGCTCAGCGTCTCGGTGATACCCCGACTCTGGTTCAGCTTCTCTGCCATCCTCTTGACTTTCCTGCACAAGTATCCGATGTCACCTGTGGTTCTCAGCTTCCAATCCTCAGATGCGACACCTAGAGTCCGAACAAGTATTTCCTCGCCTGTAAACTCCTGTTTGCAAGGAAAGTTCCAGATGCCCCTGGCAGACTCCCGCTGTCATTATCCAGAACTGTCCTGTGACCTGGCCCAACTCAGTCACTGGCATGGAACGAAAATGATGATGTTTAGCTCAGACCAACTGAGATCTACCCACTGGAGCTAGAAAGGGTTAGCTCCTCAGAGGCTCTCGGTCCCTCTGTAGGTAGAGAAAATCAGAGTTCTGCCAGCAAGCCTGCGCCAGGCCCGGGGACCCCAGGAACATCTCTGTAGTGGGCAGTGATTCAGGGAGGCAGCAGGTGGGGGCGGGGCCTGGAAAGAGGAGGCCCACCAGCTGGTGCAAAGACAGAGCCCAACCCAGAGGCTCCTGCACGCATCTCCCCGCCCCAGCATGTCACCACGGCAACCCAGCGCCCCAGCGACTCCCCATCGAGTTTTAACCCAAATTACATTTTCCAGATCTAAAATCAGAGGCGCTGCGAGGATTCATGTTAACAACCTGAAGCTGCGCAAAGATGACGGCGGAATAGGCAGACCTGACCCACGATATTTTCTAGTTGAACAGGCAAACCCTGGTTGTTCACAGCCCAAACGGACAGGCCTTTTCCTCCCACACTCCTTTTAGAGGAAGAAGCAATCTTAGGGTTTTCAGTGGCAGTGCTTGTTTTCCAGGGAACATTCCGGCCTCACTGTAATTCTATTTGCCTCTCATCTCACTCCATCTTCCCCGACGTTCAGGACAGCAGGCTTCAGTCACCAGGGAAGAGATAATTACAGCCGGCGGGTGCTGTTTACTCTGGGAGAAATGTGGGCAGGTACACCGCTGGAAGACTTCCGGGGCTAACAATGCGAGGGTCTCGGTCAGCGTTCAGGTGACCGGAAGTGTCACCGACCCAAATGCCTCTTAAATCTCGCTTATAATCTCTTTCTTTGGTTCAGGTCCTTCTCACCTGATTACTCTGAAAGTTTTTATTCTGCGTGTCTTGAGAACAAAATTTCTCTGAGACTTGGGAATGTTAAGAAAAGTCTGGGCGAAGCATAAAACAGGCTGTGGGTCACTATTTTCACAAGGCATAGTCAGAGCCATTTGAGTGGGACTTCCGGCCCTCTAGTCCCTGTCAGTTAAAAACACCCTGATGTGATTAAAGGTCGTGAGGGATGCAAGCTATGATATCAGTTCAGTCGCTCAGTCGTGTCCTAC TCONS_00185495 . 5' 2567 TCONS_00185495 . 5' 2567 EMBV3_11805 ATTTTCCAGGTCCCGCTTGACGCCACGTGCCAGGAGGTTGGTCCCCGAAGACCCACAGTC Gene BVV0102_362011 - 1 EMBV3_15744 GK000022.2:11307087-11345920 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129922 1 XLOC_078634 NonCoding TCONS_00129922 XLOC_078634 NonCoding NonCoding - 22:11344389-11344763 - TSS96789 374 1 0 7.27576262615965e-05 0 0.000321663403474587 2.22035902639385e-05 0.000211216666083501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000230741729492984 0 0 0 0 9.26267761782994e-05 0.00111145166555115 3.13322857669986e-05 0 0 0 0 noncoding 0 0 0 0 -0.0222399651659566 0.849534968135458 0.0191323449968268 0.712147323383389 CCAAGTTGCAAGGCGAAGGCGCGGGAGCGAGACGGCCCCCGGGCCCTCCAAGTGTGAGGGGGCACTTTGGCTTCATGCCAGCGCTCTGGCCCTCGCCCCAGGTTTGACAGTGGCTGCCTGCTCTTCAGAAGTACAGTCCCTGCTCAGCTCGGCAGCCACAGGCCCCTTACTCTCCTCAGCCTTCCACTCGCTACCCAGGCTGGGCCCCTTATTGCAGAGCACCCGGAAATGCCCATTTTCCAGGTCCCGCTTGACGCCACGTGCCAGGAGGTTGGTCCCCGAAGACCCACAGTCCAGCACGCGGGCTCTCGAGGCCGATGCTGAAGTGGGTTCCTCAGGCATTCCATGCCTGGAGCCTCCAGCCCTGTCCGCGG TCONS_00126034 . 5' 1146 TCONS_00126034 . 5' 1146 EMBV3_07811 CATCCAGGCTGTGTCCCTCAAGATCCAGACACTCAAGTCTAACAACTCAATGGCACAAGC Gene GeneID:523847|CHMP2A:NM_001034550:46_cdna Constitutive 1 NULL GeneID:523847 18 GENE CHMP2A MGC127087 chromatin modifying protein 2A EMBV3_14296 TATACTCAGTTGTGTCTCAGTCGTACCCGACTCTGCGACCTCGTGGACTGTAGCCTGCCA Gene BVT0102_358938 - 1 EMBV3_03349 GK000007.2:21654930-21661196 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19184 GCCCTGATAAACTGATGTGTCTGTACTTGTTTATTTAGAGGGTTTTGGGGGAGCAGGTAG Gene GeneID:539458|FOXJ3:NM_001076162:257_cdna UTR3_Alt 2 NULL GeneID:539458 3 GENE FOXJ3 NULL forkhead box J3 EMBV3_23497 TCCCCATGGCCACATGCTCCTACGAAGCTTTTCTGCTGCTTGGCTTTTCTCTGAACAGAT Gene GeneID:532836|AHCYL2:NM_001101143:176_cdna UTR3_Alt 2 NULL GeneID:532836 4 GENE AHCYL2 NULL adenosylhomocysteinase-like 2 EMBV3_35109 CCACCAGGTCAGTGCCAGTGGTCTTCAACTCCAGAGAGAAAAGACAAAGAGCTAGGGCTT Gene BVV0101_016674 + 0 NULL GK000019.2:38394138-38413083 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093644 TCONS_00093645 1 XLOC_057204 Coding TCONS_00093644 XLOC_057204 Coding Coding TTLL6 19:38354790-38402143 j TSS70189 3432 1 TCONS_00093644_5 545 0.0501165501165501 15 0.927838317283325 0.000918347153842685 0.000596962808966319 0.000148299984605265 8.55769796709368e-05 0.000418281649407732 6.00497999108784e-05 0.000323145643031371 2.40031439459855e-13 0.000659575710549191 0.000203116755326116 1.64830457357883e-29 3.62233258642576e-28 6.5083852112044e-33 3.78008245389505e-53 1.4378794146299e-34 1.22048701346742e-09 0 0 0.000200777741465792 0.000343829672770209 0.00011692986438034 0 0 0 0.000176838235762839 0.000431189330294403 0.000442161414905298 1.58367313843966e-26 5.59088230631093e-06 6.77889111702472e-21 XM_002695940.2 TTLL6 PREDICTED: Bos taurus tubulin tyrosine ligase-like family, member 6 (TTLL6), mRNA. 0.0 3501 100.00 0.565268065268065 NM_001130918.1 TTLL6 Homo sapiens tubulin tyrosine ligase-like family, member 6 (TTLL6), 0.0 2302 85.58 0.585081585081585 TCONS_00093644_5 sp|Q8N841|TTLL6_HUMAN TTLL6_HUMAN Tubulin polyglutamylase TTLL6; 0.0 892 82.93 0.976146788990826 2 coding ATGCCAACTACCGAAGGGGCCAATCGAAGCCCTGGAAAGCCCTATATGGGACCCACGAGTGTGGTTGCGAACTATACGGGCGGCAAGCGGGGGCGAGACGGGGGAATAGGAATTGCGGGTAAGAGCTATTTCCCCCGAGCCTCCTCGCAGGCAGGGGAGATGCTCCAGTGCCTACCTTTGGAAGAAGAGGAAGGGACAGACTCAGAAGAGAAAGAGGATGGTTCTATAGAAGATTCTAAAGAAATCATCACCATGGCTTTTGTGAGAGAGAACATTGGGGCGCAAAGGGGGCTTCAGAGTGCCCATCAGCAAGGCAAGAAGAAGAGGAAGAAAAAGAGATGATTGGTGATCAATCTATCCAGCTGCCGATATGAGAGTGTGCGTAGGGCCGCCCAACAGTATGGCCTTCGAGAGGGAGGAGAAAATGACGACTGGACTCTCTACTGGACTGACTTCTCAGTGTCACTGGAACGGGTGATGGAAATGAAAAGTTACCAGAAAATCAATCACTTCCCAGGGATGAGTGAAATCTGCCGCAAGGACTTGCTGGCCAGGAATATGAGCCGCATGTTGAAGATGTTCCCGAAAGATTTCCACTTTTTCCCGAGGACCTGGTGTCTTCCTGCTGACTGGGGAGATTTGCAGAACTACAGCAGGTCAAGAAAAAATAAGACTTACATCTGTAAGCCGGATTCGGGCTGCCAAGGGAAAGGTATATTCATCACCCGAACAGTGAAAGAAATCAAACCAGGGGAGGATATGATCTGTCAGCTCTATATCTCAAAGCCCTTTATCATTGACGGGTTCAAGTTCGATTTACGGATTTATGTGCTCATGACATCCTGTGACCCCCTCAGGATTTTTGTGTACAATGAAGGACTGGCACGCTTCGCCACCACCTCTTACTCCCATCCCTGCACAGACAACCTGAACGATATCTGCATGCACCTGACTAATTATTCCATTAATAAGCACAGTGCCAATTTCCTTCAAGATGCTCACTCTGGCAGCAAGAGGAAGCTCTCCACCTTCAACACGTACATGGAGAGCCATGGCTACAACGTGGCGCAGATCTGGAGAGACATTGAGGACGTTATTATCAAGACGATCATCTCGGCCTACCCCATCATCAAGCATAACTACCACACCTGCTTTCCCCACCACACACTCAACAGCGCCTGCTTTGAAATCCTGGGCTTTGACATTTTGTTAGATCACAAACTCAAGCCCTGGCTGCTGGAGGTAAACCACTCTCCGAGCTTCTCCACTGACTCCTGGTTGGATAAAGAGGTAAAGGATAGTTTGCTGTATGACACTCTGGTCCTGATCAACCTGAGAAGCTGTGACAAAAAGAAGGTCTTGGAGGAGGAAAGACAGCGGGGACAGTTCCTACAGCAGTGTCGTTCTCGGGAGACCAGGAAAGAGGAAGTCAAGGGCTTTCAGGCCGTGCGTGTAGAGAAAACTGAGAAGTATGAAAAGGAAAACTGTGGAGGGTTCCGCCTGATTTATCCCAGTGTGAATTCGGAGAAGTATGAGAAGTTTTTCCAGGACAACAACTCCCTCTTCCAGAATACAGTTACCTCCAGGGCTCGGGAGGTCTATGCCCGGCAGCTGATCCAGGAGCTGAGACTGAAACAAGAGAAAAAATCCTTCCAAATGAAACAGAAGAGGGTAGACATGCAGGGGGAATCGGCAGGCGAGCAAGCGAGAGGCAAGAGCTGGCAGAGCTTGCGACAGAAACGACAGCAGAAATGCAAGACTACCACCAGCCAGACCTCCAAACAATATCTCCAGCCATTGCTATTGGTGTCCGGTACACCTGACTTGCTCTCGAGTGTCAGACACACAGAGAAAAATGAAGCAGATAGCAGCCTTGACCAGGAGGCCCTCAAAGAGGAGGCTGATCCAGCACTCCGTAAGCCTTCATCTTCAAGGCCTTACAGCTCTGTACCTGACCTGAGGAATTCAAGCCTTCTCAGCTGCTCCAGGCCAGAGCTCAGTAAACCCATCTCCAAAATGAAGGAAGCCAAGTCTACCTCTGCAGTGAACACGATCACCAGCACTGTGAGTCAGACTGGATTTCTGCCATTTCTTCCTCTTACTCCCAGGAAATGATTTGTCTCTTCCTACAGTGTCTACGATGCCTGCAGAAGCAACTGAAAGTTTTATTTCCTCATCTAGAGAGCCTGGTCTTATGACTACCTCCCTTTAGCACTACGGAAGCTAACAGCCTTGCTTTTTGTCCCGCCCCCCAGTTAGCTTACAGTCCTGGAGAACCACGACTTCCGGGAGTTATGGGTGCTGCCCCAGGACACGTCCTAGCTGCCCCACCAGTGGCGTTCTTATGGGTCCCTCACACAGCACTGCCATCCAGGACACTCCCAAGGATAGAGCAACATGAAGGGAGGAGTGTTGCAAGGAAGGACTCCCCATTTCCAGAAGTCCAGAGCCCTCAGGGCACCACCAGGTCAGTGTCAGTGGTCTTCAACTCCAGAGAGAAAAGACAAAGAGCTAGGGCTTGATGGAGAACTCTGAGCCCCGAGTAAGGGAATCAGGACAGCTGTAGCTTCATCAGGTAAAGACCAGACCTCCTCCTACACCAGCAGCTCTGTGCCCAAGTATCTTCCGGCTGCCTTCCCTACCATCCTAACTCAAATTGCCTTTTCTGATGCCACCATCACTATTAGGCTGCCATAGGTCATAGTCTGGCCCAGAGAAAAGGTGTAAGACTTGCTGAAATGGGACTTCCTAGAAGCTCTGTATCTTTCCCTTTTTCTCCCTAGTCACCAACCCCAGCCAGTCAAGGTTCCTGAGTTGATAAAATGGAAGTCTCTTAAGGTGAAGTCAGAATTATTTGTCTTCCTAAGGGACAATTTGGTGCCAGCACTTTTGAACCTAACGACAGGGTCACCTTCATGGTCGTGCAGTCTATGCAGTCACACAGGGCTCCACGCTAGGAAGGCCTTGCATCTGGTTTAATGCTGTTACCATCTTGAAATTCTGAATAATTTGTGAACAAGGAGTCTTGTATTTTCATTTTTGCATTGGGCCCACCAAATTAAGTAGCTGATCCTGCCTAGAGGCTGTAATGGCTCTGGGTTGTCCAAAGGCAAAATATTATTAAGAGTAGGATGCTTTCCTAGCCCCACCTCCTCCTGCTTGTTCAGCCATGGAGCTATGCAGAGCAATTGTCTGCTGAATGCTTATGGGGGACTAAAAATGCTCGTGGCAGTCCTTGCCCCCATGGAGTGTGCGGTGGGGTAAGACGGGTCCCCGGATAACTAGTCGGATTTAAGTTCCACTAAAGAAGAGCATCGGTGGATGAGAAGGAAATGCCCTCACACCCAGTTGCGAAGATTAAGTCTGCTTCATTAGAAGAGGTGATATTTGAGGTGACGGAAAAAGATAAATGGATTTTTTAATTAAAAATTT EMBV3_15426 GGAAATCCTCTCCAGTGTACCCACTCTCTCAGGATCTGCCTTATGTTCACATCACTTGCC Gene GeneID:785211|LOC785211:XM_002691506:474_cdna Constitutive 0 NULL GeneID:785211 11 GENE LOC785211 NULL similar to WD repeat-containing protein C2orf44 homolog EMBV3_02884 CGCCTGCGACTGTGCTTCTGGGCCTCTTCTGCGCACATTACTTTCACAGGACATTTGTTT Gene GeneID:527024|SRD5A2:XM_002691224:65_cdna Constitutive 0 NULL GeneID:527024 11 GENE SRD5A2 NULL steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) EMBV3_08803 AAGAGACTTAGATAGCAGCCTTGGGGAGGGCACGGCTGAGACTGTCACCATATCTGAGGA Gene GeneID:513917|LOC513917:XM_002696058:373_cdna Constitutive 0 NULL GeneID:513917 19 GENE LOC513917 NULL similar to Signal peptide peptidase-like 2C precursor (Protein SPP-like 2C) (Protein SPPL2c) (Intramembrane protease 5) (IMP5) EMBV3_12989 CATCGAGCGGCAGCGAGTGCTCAGGGGAGATGCAGACAACGACATGGTCAAAATCGAGAA Gene GeneID:100299651|ABCA2:XM_002691713:87_cdna Constitutive 0 NULL GeneID:100299651 11 GENE ABCA2 NULL ATP-binding cassette, sub-family A (ABC1), member 2 EMBV3_01131 CCTGGGTGGGGTCCTGTGTGCATTCTTCAGCTCAGATTTTTCTGGCCCTGAGTTTACCTT Gene GeneID:532486|LOC532486:XM_002692864:21_cdna Constitutive 0 NULL GeneID:532486 15 GENE LOC532486 NULL similar to Olfactory receptor 1209 EMBV3_06223 GTCGGAAGATAGAAATGGTAGAATAACATACCCCTTATGGCCAACAGAAAGTGCCCGGGG Gene BVT0102_079736 + 0 NULL GK000013.2:65807439-65879887 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046035 1 XLOC_026599 NonCoding TCONS_00046035 XLOC_026599 NonCoding NonCoding LOC100848870 13:65836197-65842861 j TSS33463 4427 3 TCONS_00046035_5 104 0.0404337022814547 3 0.336034819150533 4.19135676762443e-05 4.91849132937923e-05 9.62194719670516e-05 1.01575493364747e-05 3.92322363087035e-05 1.50880877007173e-12 7.97683566916534e-05 1.82451130593157e-06 8.42381251643574e-05 0.00148923562140279 0.000472504282231723 0.000614659668485484 4.36676030067107e-06 0.000111542568607413 8.29252064925461e-06 0.0181098533646159 0.00708612729598979 0.0122331250909858 5.77204423218201e-12 2.75382295802864e-12 1.41197359595955e-06 0.00731574210891866 0.00813169429155994 0.00885870951764643 0.000109553422431378 0.00018010217649584 9.46216162016431e-05 0.00167602883771769 0.00150695535790753 0.0019770215895972 XM_005192486.1 EPB41L1 PREDICTED: Bos taurus erythrocyte membrane protein band 4.1-like 1 (EPB41L1), transcript variant X5, mRNA. 0.0 4080 89.05 0.705669753783601 NR_027451.1 LINC00657 Homo sapiens long intergenic non-protein coding RNA 657 (LINC00657), non-coding RNA. 0.0 1656 72.82 0.705669753783601 0 noncoding 0 0 0 0 -0.160942591250276 0.188316995282331 0.0527065170778635 0.585480030409736 GGCAGAGAGCGCGGCTAGAAGCGGATCGTGGCCTTCTACCCTGGGGCCCTCCAGGCCCTCCGGCCTTTGGTCGGTAGGTGAACTGGGGGGCCCCGGGACATTCTCGGGTGTGTTTTGCAGAGCGGTCGCCGAGGCTGGCAGTTGGCAGGGCCCAAGACTGGAAGCAGCCGCGAACCTCTCCCCCCACCCCCACCCCCACCCCCACCGCCGCGACCTAATGGCGTCGGCCCCTCCGAGCCAGGATCCTGCCGACCGCTGGGTCTCTTCACCCAGAGCTGCAGGGCTTGGGCTTAGGCGAAGCCTCCGCCTGGCCACCGAGAACGTGGCGCCTTTCGGCGTCGGGCGTGGCAGGACTAGAAGAATGGCGGCCGCTCTAACTCCGCGGAGGGCCGTTAGAGCCTCGGAGGCCCGGGAAGGATTGTGGACGCCAGTTCGTTCACCCTTAGGCCTTGGGGCCACGCGGATCCGCGACCTGAGGTGACCGCTCTGTCCCAGTTGGACGAGACCTCACCTCGTCCGGACAACGACGGACAAAGGCCTTAACGTGCCCGCAAGGTGAGCGGAGCCGCGGTCGACGACGGGTGGAACGTTAGCGGGCCAGTGGGCTTCGATCGTCGTTCTACCGAGACATTGATGTCGGAAGATAGAAATGGTAGAATAACATACCCCTTATGGCCAACAGAAAGTGCCCGGGGCCCTCTGGGAAGATTTACTGGCCGCTGATAAAGGCCTGTGTATATAATATGAAAAAGCTGCTCTCAACTTTACCCCCAACCTTTCAAAAGAAAACTTTGGCTACATCTAGGCCTCCTAGATGTAAAGAGGTTGCCGACGTATGATAAAATAGTTAGAAAAATCACGTCTTGTAAATGCCCATTTGTTTAAAAAAAAAAAAACAACTATAGAAAAGAAATGTCTTCTGGAAATGACTTTTCGAAATGGAGTTGTTTGATTACGTTTAGAAGCAACTTCCGGAGCCACCGAAGTCCCCGTTTGTTCAGTGGGTTGGAGGACGTCGAATGGAAGACCTTGAGGAGGAAGAATAGAAAGTTCTGTGCCAGACTGGTCATACTTAGAAGACATTTCTATATAACCCTTGTTGTGTGTGTGCATTTTGTTCCTCACTACTGTATATATAGTTAACAATAAGTACTTTTTTGAAATACCTAGTCTTTCTAGATGTTCTGAAGTGCCTGATATATGTTAAAAGTCGAGGTAGTAAAAGGACATTTTGTAAATACCTTTTTGTTAAAATTCATACGAAATGATGGGGAGTGGGGGGTTGGCCAGACCCCTTCCTGGAGCAGTACACTCTGTTTTGTGCACTGGTCGGGAGAGGGGAGGGAAGTGCAGATCTCTGCCAGTGTGTTTATAGTGAGGCAAGAGGAACCATTGTCTTTTCCGTTAGTGCATTTTGTTTCACTCTGCTGTACATATAGTGTACATAATGGACAAATGAGTCCTAATTTACAACATCTAGTCTTTCTAGATGTTAAAGAGGTTGCCAGTGTATGACAAAAGTAGAGTTAGTAAATGATACATTTTGTACATTTTGTGTTAAAAGTTTCTAGGAAAGATTGTCTTATCAAAATTTGAGCATCATAGCCCCCTGGGTATGGTGGAAAGAAGACAGAAGAGAAGGGAAGGTCTTAGGCTAGAATACTCATATTTTGAAGACAATTTCAAGATTCTAACTGTTACATGTGGCAGTTTATTCAAGACTGCTTTGTATATAGTGGACAAATTAAGTCCTTATTTGAAACATCTAGCCCACCTAGATGTTTAGAAGTGCCCGACGTATGTTAAATGTAGAGGTAGTGAAATACCACTTTGTAAATACTTTTTGCTCAAATTCATAGGAAGTATTGTCTTTGAGAATGTTAAATGTTAAACCACTCTGTGAGCAGTATACTGTTGTCTACACTTGTTCAGTGGTTTGGAGGAGGTGGGAGGGAAAGAATTAACAAAAGGTAATATGCTAGTTGTTTGCACCTGACATTTTCAGATGAAACATTTTTTGTGTGTTATGTGCATTTTGTTTTGCTGTGTATATAGTGTATATAATGGACAAATGAGTCCTAATTTTGTGACATCTAATCTCTAGATGTTGAAAGAGGTTGCCAATGTATGACAAAAGTAGGGTTAGTAAACTAACACATTTTGTACACTTTGTGTTACAATTCATTGGAAAGGCTGTCTTCTGAAAAGGACCTTTGAAAGTGAAACTATCATAAATCACATCTAAGTGATACATGTGCCTGTACTTGCCACTCACTGTTGGATGGATGGCAAAAAGGAGGAATTGGAAGAAATGAAAAGTTCTAGACCAGAATGTTCCTTCGTAGAAGATACCTTCAGGTATAACCATTGTTACATGTGTGTAGTTTATTCAACACTACTGTGTATATAGCGGACAAACTTAAGTCCTTATTTGAAACATCTAGTCTTTCTAGATGTTTAGAAGTGCACAAAGTATGTTAAAAGTAGAGGTAGTGAAATAACATTTTGTAGATATATCCTTTCATTAAGATTCATACGAAATACTCATTAAGAAATGGAATAATCAGAGTGATCAAACCACCTCTCAGAGCAGTACGTATTACTTTATTTGTGCTGGTTCAGGGAGAAAGTACAAGGGGGGTTATACCAGTATGTTTATGTTAGGCAAGGTTAACCGTTGTCCTGTATGTGTCTGCGTTTTGGTTTAGTTGTGTATATAGTGTACATAAGGGACAAACGTCCAAATTTACAACATCTAGTCTTCCTAGATGTTAAAGAGGTTGCCAGTGTATGACAAAAATAACCAATAAATACATTGTGTACACTTGATGTTAAAATTCATAGGCAAGATTTCTGAAAACTGGCAGAAGTGAAATTGTTAAAATCCCCTCTAAGCATTATAGATGCTTATTAGACTTGTCCACTGGGTAGATAAAGGGGAAGGGTCCTTGGCTAGAGTGTTCTGTTTAGATGATACTTTGAGACTGTAGCCATTGTACGCTGTGTTCAGTGCTACTGTGTGTGTGTGTAGTGGACAAACTTAAATCCTTATTTGAAACATCTAGCCTTTTAGATGTGTAAAAGTACACAGACTGTTTTGAAAGTAGAGAGTTAAAACACCTTTTAAGTTTTTTTTTTTTTTTTTTCTGTTAATAGTAATGGTTTTATTTGGGAATTGGGGTTGTCTTGGAGAGTAAGCTGAAGTTTACTGGGTGGTGGTGGGGGCGGGGGGGGGGGGGGCAGGGAAGGAAGTGCAGAGAGAAGGGCTGTGTGCCCATCAGTCTTTATAGACAAGTTCAGATTGTCTACCCATTGTTCTGTTTGTGCATTTTAGTTAATATTGCTATGTATTAACAAGCAAGTCCTAATGCCCAAAGTATATCAAAAGTAGAGGTAGTAAAATAACCCCTTAATGAATGCCCTTTTGTTGGCTTTTAGGAAGGGCTGTGTCTTCTGGGAGTATCTATGTTAATCCACCTCTTGGAACTAGATGTAGTCTGGTACTTAGTCGCTGAAATGCTGGAGGAGTAAGAGGAAGGGTGAGGGGAAGGGCTCTTGGCTAATAGCTCCCATTATCTGGAAGACAGTTTTAGGTTTTAACTATAGGTCTGTATGTGCATTTTTGTGAAGTACCTATGTTTATTGTGGACAAGCTTCATTACTTTGCAACATCTAGGCTTTTTAGATGTCCTGAGGTGACAATGTATGATATAAAGTAGAGCTAGTGAATTAACCAATTTGTAAATATCTTTGTTAGAATTGATTTTTTTTAAAAGGCAGCATCTTGGACCTGGAATTATTATACCTTCTCTGAGAACTGTACATCAGGACTTGCTCATCTAGGTTGGCAGCTGAGGGGAGGAAGGAAGTCTAGAGGGAGGGCTGTGTGTGGATGTGCTCATGTTTATATTTTGATGATAACCATTGATGTGCGTGCATCTCCTGGCTGTACTATATATAGGAATGCATTGTTTAATAATTCAGCAGAAGCATACCTCCTTGCTAACACCGTAATAGTTTAGATCAGATGATGAACCCTCCTAGAACTATTATGCTTTGTGTGCTCTGTTGCTTTATGTCTCATTTTAATTGAACATTAAGGGAATGTAGTATTTTAATCATGATCTAGAGGCCTGTTGCCATTTTTGTCTTTGAAATTTTTGTTGCCAAGTAAGGCAAGATTACATTTTTTTCCTTCCAGATTGAGTTGGTGTAGTATATTCTTGGTTATCAAAATACTCATAGCTTTGGGACTTTGAAATGGTAAATATTCATGATGTGTGAAACAGCATGATACATAACTGTAGGTCTTCATTACATAAAAATGGATGCTTGGTTGTGAAGATACACAAACGAGACCTAGAAGGACATGTCACGGTAAACTGCTTGTGATTCTGAATGACTTCCTCTTTTTTTTTTTTTTTTTT EMBV3_31397 AGCTTTTCTGTGTGGGTTTAGGGAGGGCGGGCACTTTAATGTTATTAGGGCTGGTTTGGG Gene GeneID:783833|INPPL1:XM_002693435:70_cdna Constitutive 0 NULL GeneID:783833 15 GENE INPPL1 NULL inositol polyphosphate phosphatase-like 1 EMBV3_32194 CACCTTCCACTCCAGCACCTATTCCTGTGTCAAAGCTCCCGGCAAACATAACCCGTCAAA Gene BVT0102_248859 + 0 NULL GK000005.2:94702904-94763645 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192838 TCONS_00192841 TCONS_00192839 TCONS_00192840 1 XLOC_117289 Coding TCONS_00192841 XLOC_117289 Coding Coding EPS8 5:94700639-94750054 j TSS144231 2904 1 TCONS_00192841_4 579 14 0.941514550532238 8.25052075745636e-08 0.00182409931333153 0.00147724089514468 5.30126219848354e-10 0.00138405538791345 0.000172934979390971 0.000179011663409508 0.000526556143457617 7.72644098206497e-05 0.00101946957096889 3.26406423856367e-05 0.000188452989680007 0.00159527968993486 4.7684732605443e-05 0.000141213513476252 0.000239656461781236 0.000283288455922043 0.000569077754484145 0.00178023241742296 0.00372779488285927 0.000521293388646821 0.00047832386880536 0.000145930531199387 0.000384927277878352 0.00229066600196801 0.00276281682223513 0.00139463586909096 1.74314710861653e-05 1.33718569479441e-124 4.57072203062673e-05 XM_005198398.1 EPS8 PREDICTED: Bos taurus epidermal growth factor receptor pathway substrate 8 (EPS8), transcript variant X2, mRNA. 0.0 5167 100.00 0.986225895316804 NM_004447.5 EPS8 Homo sapiens epidermal growth factor receptor pathway substrate 8 (EPS8), mRNA. 0.0 3458 86.55 0.986914600550964 TCONS_00192841_4 sp|Q12929|EPS8_HUMAN EPS8_HUMAN Epidermal growth factor receptor kinase substrate 8; 0.0 981 89.97 0.991364421416235 3 coding 0 0 0 0 -0.126430804221526 0.418587687609283 0.0360987473559675 0.633232017857117 GACATTACAGAGTAAATCAATACCATGCAGATGGAAGTTGAGAAACAGAGAAATTATTACCAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGATAGAGATGTGCAAATCTTAAACCACATTTTGGATGACATTGAATTTTTTATCACAAAACTCCAAAAAGCAGCTGAAGCATTTTCTGAGCTTTCTAAAAGGAAGAAAGCTAAGAAAGGTAAAAAGAAAGGACCAGGAGAGGGTGTTTTAACACTGCGGGCAAAACCTCCACCTCCTGATGCATTTGTGGACTGTTTCCAAAAGTTTAAACATGGATTTAACCTTCTGGCCAAATTGAAATCTCACATCCAGAATCCTAGTGCTGCAGATTTGGTTCATTTTTTATTTACTCCACTAAATATGGTGGTGCAGGCAACAGGAGGTCCTGAGCTGGCCGGTTCAGTGCTTAGCCCCCTACTGACGAAGGACACCATCGATTTCTTAAATTACACGGTCAGTGCCGATGAGAGGCAGCTGTGGATGTCACTGGGAGACTCTTGGATGAAAACCAGAGCAGAGTGGCCAAAAGAACAGTTTATTCCACCGTACGTCCCTCGGTTCCGCAGTGGTTGGGAACCCCCGATGCTGAACTTCATGGGATCATCAGTGGAGCCAGATCTCTATCAACTGAATGAGTCTGTGGCAAATGCAGCAGAACATCATCGCAAGCAAGAAACAAAGAGATTATCCACAGAGCACTCCAGTGTATCAGAGTATCCTTCAGCTGATGGGTACACGGCATTCAATAACATTTATGGAAGAGGGCCCCATTCGGACCAAGGGGAGGCTGCTGTTGCTTTTAAGCCAACTCCTCTTCGCCATGTAGATAGAAATTATGATCTACAACCCAAGAAATATGCCAAGTCCAAGTATGACTTTGTGGCAAGAAACAACAGTGAGCTCTCAGTTCAAAAGGATGATATCTTAGAGATCCTTGATGATAGGAAGCAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTGAGACCCCCAGAATCTGGATTAGGACGTGCTGATCCACCTTACATGCATACCATACAGAAACAAAGAATGGAGTATGGCCCAAGAGCAACCGACATTCCTTCTGCCCCGTCACCTCCTCCAACACCAGCTCCTGTCCCTGTTCCCCTCCCACCTTCCACTCCAGCACCTATTCCTGTGTCAAAGCTCCCGGCAAACATAACCCGTCAAAACAGCAGCTCCAGCGACAGTGGTGGCAGTATTGTGCGAGACAGCCAGCGACAAAAACAAGTTCCTGTGGACCGGAGGAAATCTCAGATGGAGGAAGTGCAGGATGAACTTATCCACAGACTGACCATTGGTCGGAGCGCCGCCCAGAAGAAATTCCACGTGCCACGGCAGAATGTGCCAGTTGTCAATATCACTTATGACTCCACCCCAGAGGAAGTGAAGACGTGGTTGCAGTCAAAGGGCTTCAACCCTGTGACTGTTAATAGTCTTGGAGTATTAAATGGTGCACAGCTTTTCTCTCTCAATAAAGATGAACTGAGAACCGTCTGCCCGGAAGGGGCCAGAGTCTTTAGCCAAATCACTGTTCAGAAAGCTGCATTGGAGGATAACAGTGGCAGCTCTGAGTTGCAAGAAATCATGCGAAGACGACAGGAAAAAATCAGTGCTGCTGCAAGCGACTCAGGAGTGGAGTCTTTTGATGAGGGAAGCATCACTAATTAGTTTCAAAATTCCATCATTCTTGGCATGTGTCCACCATGCTTTGTTTTAAGAAGCCATGAAAGGAATGTCAGATTCTTCTTTCTTGGTATACAGAATTTATCGCCATAAAGAAACAATGCAAACCTAAGTAAGCAGAGGACTTTCTTCTGGGCCCATTATTTTTAAAATTATAAATTTTAAGCAGAAGTTTTGACCTTGGGAAATATTTTGCATATTCGACCAAGGTGAGGTTTCCTTTAATGGATTAATTATTTCATCTCAGACTCAATGCATAAGCAGATATTTTTGACAGTGGTGAATTTATTTATTGCAGCAAAGCAAAAAGATAGATATGCCCATGATTCAAAATCTAAATATTTTTAGGTTTGCCTGTGACTGTGTTGTGTATCATCCAGGGTGTAGCTTGCTTTAGGCTAGTCTCTGCTTACTTAGGTCTCTTCTTAGACATATAGACTATTTAGATTTATTTAAAGTTCTTAATGCCAACAGTTTAAAAAAATTTGAAACATTTAATGAACTGTAAAGTACAACAAAGCCTTGGACATACAAATAGAAACCTTTAGAACATTCCTGAGACATTTTATTTGTCACGGCTCTGTTGCTCACAATTCCTTGTATAGCTTGTATTTTGATTTAGTTTATACTCTACTTATTATCTATACTGTGTTCTTATATATTAAGAAAGCACAAGTGTAAAAGAGGTCACATACATTCAAAATCTGTCACAGGAAATAGCCTGCATTGGTGTGTGTTACAGTATTTTGCTTAATGAAGGCCCCAGTTCTGAATATTGATACAAGTAGTTAAAAGTAAACTGGGGCCATCTTATGTGTTTATCCATGTCAAGTTTTTCTGGTATTAAGAAATAATCTACACATATTTTGATCCTGTGAAAGATTCTAGGTAGAGAAAAGAAAGAGACCTAACCTTCAACAAAGTTATTTTTGGAAACATGATTTTTGTCATTAAATGTTATATTATTTCACATATATAAAACAGATGTTATGTAAGAATGTTGTATATTTTAACATAAACCCATTTAGAGAGATTATCTAGATTCATTAATTTTCATAGTGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTATGTTAATAAATG EMBV3_01782 GGACTTTGTACTCAGGGCTCTCCTGGAAATAGGATTACACAATAAAGAATCCCCACAGAG Gene BVT0102_231258 + 0 NULL GK000013.2:7704940-7797014 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046906 1 XLOC_027045 Coding TCONS_00046906 XLOC_027045 Coding Coding - 13:7740216-7743783 - TSS34082 3567 3 TCONS_00046906_5 79 0.0754135127558172 1 0 0.000198344792362581 0.000321144813559677 0.000132311097256296 0.000237461494454819 0.000473371106672455 6.63293509565872e-05 0.000355592186746638 0.000275441753346879 0.000413640131813108 7.03627621676258e-05 2.63659565253293e-05 8.01948949343221e-06 4.74594301887492e-05 0.000212978593608871 0.000116912221162423 0 0 0 8.24245669554279e-05 0.000128022343509153 1.53190811871209e-05 0 0.000298342352647774 0 0.000223373939819267 0.000179741512972978 0.000220109013176189 3.50062846658438e-05 4.08293395399776e-06 3.3710408248339e-06 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 3e-115 421 92.98 0.0790580319596299 0 coding 0 0 0 0 -0.169797787389954 0.626436663454429 0.00957041855566472 0.892887311536856 CCCTGACCCTAAATGTCATATTTATCTCAAATTTTGGAAATTAGTTTGTGTTATATAACAAGCATCTTATGGATTTGGCTTGTGTGTGTTTTAAATTTTACTTGTTTTAAGCATTTTTTAAAAATAATGTACTCATTCTATTAGGCAGCTTTTCTTTGGAAGTCAGGAGGACTTTATGTTTTTGAAACTGTAATTGGTTGTTTAAGTTCTCCAGACCAGTAATACGAATTCTGCACCTTGTTTCTAATTCCATCTTTTCTTATTTTAAGGACTTTTAGTATACATTGTGATCTTTTTGAGCATAATATCTCAGTAGTCAAGAATATGTTCTCCTCATTTTCTCCAAGGAGGATTTCTTGACTGAAAGTTCCTCTTGTACACTGGGTTCTCTTCTGAGCACCCTCTTACTAATGCAGAGTGGCTGTGTGTGTATACGAAAGGGCATGATGTTGTTTCAGTCTGACATAAGAAATTGTACAAACGTGTTTATTAACTGCATTTCTTGTTGTGGCAAAAAGCTAGAAATAACTTTAACACACATCAAGAGGAAGAATGTTTGTGATGGAGTGTTACGAAACTCTTAAAAATGGGTTCTCTGTTCATTCTAAGGAGTGTGTGTGATTTTTTTTTTAATAAGTGAAGAAATTTAGGTATAATTCACAGTGTATCCTATTTTAAAAAACTTTGTTTCTATGAAACATGTTTTATATATTTTATTTTTTTTTGTTTTATATATTTTAGATAAATGATAATTATCTTGACATATGGGATGGAGGATAAGGAAGAAAGAGGGATGATCTTTTTTTTCTTTTCATATATTATCACATTCATTTCTGTGAAAGTGCTCCTTTTTATAATTTTTCAGGAAGAGTTTAAAGATTATCAAGAAAGTACTGAAATTAGTTTTATAGTATTTTATAAATTTATAAAAATACAGAAAAATAAAAATACTTGTAGTGGTCAGTGATATATACACACACAAACAGACACACACACACACACACATATATATATAGGTTGCTATTACTGTGATAAGGAGGATGCAGTATGGATTATGATTCCATGGGAACACTAAGATAGAAGCCAGCTTTATCTACAGGAGATAATGAGAGTCAGGGATAGTATGGACGTCTGAAATGTGGTCAAATGTGAAACACTAAATTGCCCAACAAAATTTAATTGAATTTACTTGTGGCCCTTCTTTCCTCCTCCTCAGAAAGGAGCAGGCAGAAGAGGAGCATCCAACAATGTAAAGATGAAAAAGTGGAATGTTATTTGAATTCTGTGCTGGAGAACAACACACTAACTAGAACTGGGCATGGTGAACCAGGCTCGGACCAAAACATTTCTGGGCCTCTGTTTTCTGAGCTATAAGGACTTTGTACTCAGGGCTCTCCTGGAAATAGGATTACACAATAAAGAATCCCCACAGAGAGTTGATTTTAAGTTTTAATATTTCCTCTGCCAGTAAATATTAATAGCTTTACTGTCTTTTGGAGGAGGTGGGGTTAATATAACAATACATGTAGATGTGAAGTTGGCCATTACTTTGCTCAACTAGAGTATAAGAATATTTATCTTTTATGACCTGATAACTATTACATAAGGAAAATTACTGCATTAGTAAATATTTGTGGCTTCCTTAGACTTGTACAGGTAACCTCATGAGTTCATAGGGTGTAAGTGTTAAAGTATAACTTAAAAATACAGAAAAGTGACAGTTAATAGATCTGGAAGTCTTAGGAAATGCTTTTATAGTATTGAGGGAGACGAAACTTTAAACTTAATTTGTATTATGCCCAGGGAATTGTGTGTATAACTTAAAAAACAATTAACCTTGAATTTACTTGAGGAAAAAACATAATGTCTGTGGGATAAAGATGAATTTTTACTATTAAGCTTCCTATTATGTCAGGTCACTGAACTCAGGTTTCACAGGCAGAGGCTCTATTTGCTTTTCATTTTTGTCTCTACCCTTTCTCTTTCCCTCAGCTTGAATACTCATAAGTCCCTTTGATTATTTTAATACATGATTATAAACTTAAATAAATTGTATTAGCTATGTTTTTCTCCTTTCAGCTGGGTTATCAAAGGATTATATAAACCAGTATTTTCTAAACTTCAAATAGTTTTGTACAATATTGTAATCTAATATATGTGTGTTACAGCATAAACTGTAATCTGATTTGTGAGTTGTGGTTCTCTATTTGCTATCCATGTTTTAAAAGACTTACCTGTTATTTGGGTTTTATTATAACTCACAGGATAATTATAAAGATTTGACAGTGGATAGGATAGCTTTGACGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAAGTCAGACACGACTGAGCAACTTCACTTTCACTTTTTACTTTCATGCATTGGAGAAGGCAATGGCAACCCACTCCAGTGTTAGTGCCTGGAGAATCCCAGGGACGGGGGAGTCTGGTGGGCTGCCGTTTATGGGGTTGCACAGAGTCGGACACAACTGAAGTGACTTAGCAGCAGCAGCAGCAGGATAGCTTTGAAAACTATCAAGATTATACAAACAAATTGTTATTATTTTATTCACTGGTTTAAAAATATTAGAGGTCCTAGACCTATATTCTTAAGAGCTGAAAATACTTTGGAAATCATTTACTGATTTTAGGTGTAATTGAAATGGTACAGTTTTATGAATAGCAATATTTCCATTATATTGAGAGAAAATTGAGATGATTTTACTAGATGACTACTAATTATAACCAGTATTATTCAATGAGATATGGAAATATATAAGATACACCAAAATTTAGGAACAATCTGGCACTTTTCAGAGTCAATCAGTAGACTTTGTCAAATAGTTAAGTGGCTCTGAAAATATCCAACATTATCCCATAGTTTGGGACCACAGTGTATGACTACAAAGTATTGAAATTTATTACTTTTTGTTTCTAACTCACTTTGGCCAAAACCAAACTCATTGTCTTCTTTTCAAACCTGTTCACCCTGTGGAGAAGGATCCTTTCGTCTCTTCAGTTACAGATAGCTGGATAACTTGTCTGAAGTTGTCATTTATTGCTCTTCAGTAACACCTATTTCCAGCAGGTGCTAAATTGTTAAAATTTCTTTTTTAAAATGTTTTTTTTTTTGGTGCTTCTGTTTCTGTCACCTTAGCTATGACCTGAAATCAGACTCTAAATATTTTTCATTTGGGTTATAATAGTACCCTTATAACTCATCTGCCTATCTTTAAAATCTTGCTTCATCCCATCCATACCATTCTCAAAACCATCTTTCTAAAGGTAAATTTGATGAAGTCACTCTTTTGTTGTCCTACCTTTTAAAAGTCCTGTGATAAAGGACAGAACTCATACAAAGGGCCTCTTTATAACCCTGCAAGATCTTTTTCATTATATTCCTTGCGCTTTGTATTACCCCTGGTACTTTGTATGTCATTAAATATTGGCAGAAGTAATTCTGGTAGGTCCTGAGAGATTGGAAAAGTATAAAATGTATATTGAG TCONS_00041843 TCONS_00041846 . 3' 66 TCONS_00041843 TCONS_00041846 . 3' 3632 EMBV3_34390 GCTCGCTCCGGAACTTGTGATCTCCAACGACCAAATTCTGCCTTGGCCAAGGCAGCGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30936 TCTGTTTCCACAGAGATCACCCCCTCAACCCTGTAGTGATCTAAGACAGTGAAGGACAGG Gene BVV0102_219910 + 1 EMBV3_06913 GK000001.2:57145887-57156325 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23504 GGGAAATTGCTCCTGCTCCTCCCGTCTTTGAGATTTATCAGTTCTGAACGTGTTGAGCTC Gene GeneID:281944|NR2E3:NM_001167900:32_cdna Constitutive 0 NULL GeneID:281944 10 GENE NR2E3 NULL nuclear receptor subfamily 2, group E, member 3 EMBV3_24204 TGAAAAGAATTTTGAAGCAGAAACTGGGACACGGTGCTGGGTGACTGGATGGGGCCGACA Gene GeneID:517392|LOC517392:XM_002697114:31_cdna Constitutive 0 NULL GeneID:517392 22 GENE LOC517392 NULL similar to testis specific serine protease 4 EMBV3_29029 CAACAGTGTTTTAAATTCCTACAAACCAAGGTGGAGCTGTCCATGGAGGACATAGAGACC Variant GeneID:529410|POLR3F:NM_001038148:58_cdna 692^799 1 EMBV3_26373 GeneID:529410 13 GENE POLR3F MGC134486 polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa EMBV3_34201 CCTGCTCTGGATGGAAATAGGAATGCCGTGTCTTGCTGGGATGGCGGTTCTCATTATTCT Gene GeneID:100337160|LOC100337160:XM_002691942:2_cdna Constitutive 0 NULL GeneID:100337160 12 GENE LOC100337160 NULL ABCC4 protein-like EMBV3_37979 ACAGAATATGCCCAATTATTATTGCAGTATTTTGAAGAATGATCCGTCGTCTTGGGGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03803 CCTGTTGCCAAAAACTCTTCTCTAAGATCTGCAACCAGATTGGCCTGAGGAATGTGGGGC Gene BVT0102_213428 + 0 NULL GK000019.2:57722505-57726114 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18007 TCGGACATTACGCTCTGGTGATTAACGCCTTCTAATAGATTTCCTTCAGAAACCTGGCAC Gene GeneID:617253|HDHD1A:NM_001046595:17_cdna Constitutive 1 NULL GeneID:617253 X GENE HDHD1A MGC128764 haloacid dehalogenase-like hydrolase domain containing 1A EMBV3_37242 ACCAACACATACCCACACCTACATGCACACACAGGTCATTCGTGTCTACCCCTGTACTCC Gene BVT0102_110564 - 0 NULL GK000015.2:30515400-30743499 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060987 1 XLOC_036888 Coding TCONS_00060987 XLOC_036888 Coding Coding PVRL1 15:30740585-30811461 = TSS45506 4636 1 TCONS_00060987_5 515 6 0.934673721340388 0.000170217833998612 0.00011487642187608 3.12287111527549e-06 1.08591205645671e-11 0 4.1151025404211e-06 2.94240452469063e-05 1.27582337515474e-06 0 5.85756418483272e-05 4.34531405068568e-05 9.94959860701229e-05 5.81654507210868e-06 0.000107554504867138 4.6426258337502e-12 0.00412467288658551 0.00014682780957312 0.0030578853046226 1.7014719247179e-05 0 6.54816773417885e-07 0.00370553042580691 0.000718329266761879 0.0015079485519428 3.88569448370323e-05 0 2.4462995906381e-05 0.000822531033256332 0.000225661756379177 0.000990801265958327 NM_001206022.1 PVRL1 Bos taurus poliovirus receptor-related 1 (herpesvirus entry mediator C) (PVRL1), mRNA. 0.0 3101 99.94 0.371225194132873 NM_002855.4 PVRL1 Homo sapiens poliovirus receptor-related 1 (herpesvirus entry mediator C) (PVRL1), transcript variant 1, mRNA. 0.0 4037 80.41 0.95923209663503 TCONS_00060987_5 sp|Q15223|PVRL1_HUMAN PVRL1_HUMAN Poliovirus receptor-related protein 1; 0.0 977 95.36 0.998058252427184 7 coding 0 0 0 0 -0.0703529572039748 0.637715801997032 -0.00267581286387904 0.965081544689192 ATGGCTCGGATGGGGCTTGCGGGCGCCGCTGGACGCTGGTGGGGACTCGCTCTCGGCTTGACCGCCTTCTTCCTCCCAGGCGCCCAGGCCCAGATGGTCCAGGTGAACGACTCCATGTACGGTTTCATCGGCACGGACGTGGTGCTTCACTGCAGCTTCGCCAACCCGCTGCCGGGCGTGAAGATCACCCAGGTCACATGGCAGAAAGCCACCAATGGCTCCAAGCAGAACGTGGCCATCTACAACCCAGCCATGGGCGTCTCGGTGCTGGCCCCATACCGCGAGCGCGTGGAGTTCCTGCGGCCCTCCTTCACAGATGGTACCATCCGCCTCTCCCGCCTGGAGCTGGAGGACGAGGGCGTCTACATCTGCGAGTTTGCCACCTTCCCTGCGGGCAACAGAGAGAGCCAGCTCAATCTCACTGTGATGGCCAAACCCACCAACTGGATAGAGGGCACCCATGCAGTGCTTCGAGCCAGGAAGGGGCAGGATGAAAAGGTCCTGGTGGCCACCTGCACGTCAGCCAATGGGAAGCCTCCCAGTGTGGTGTCCTGGGAAACGCGGCTGAAGGGCGAGGCGGAGTACCAGGAGATCCGGAACCCCAACGGCACGGTGACCGTCATCAGCCGCTACCGCCTGGTGCCCAGCCGAGAAGCCCACCGGCAGTCCCTGGCCTGCATAGTCAACTACCACATGGACCGCTTCTGGGAAAGCCTCACCCTCAACGTGCAGTACGAGCCCGAGGTGACCATCGAGGGGTTTGATGGCAACTGGTACCTGCAGCGGATGGACGTGAAGCTCACGTGCAAAGCCGATGCCAACCCCCCAGCCACTGAGTACCACTGGACCACGCTGAATGGCTCCCTCCCCAAGGGCGTGGAGGCCCAGAACAGAACTCTCTTCTTCAGGGGACCCATCAACTACAGCCTGGCGGGAACCTATGTCTGTGAGGCCACCAACCCCATCGGCACCCGCTCAGCCCAGGTGGAGGTCAATATCACAGAGTTCCCCTACACCCCGTCTCCTCCCGAACACGGGCGGCGCGCGGGGCCAGTGCCCACGGCCATCATTGGGGGCGTGGTGGGGAGCATCCTGCTGGTGCTGATTGTGGTCGGCGGGATCGTGGTGGCCCTGCGCCGGCGCCGGCACACCTTCAAGGGCGACTACAGCACCAAGAAGCATGTGTACGGCAACGGCTACAGCAAGGCGGGCATCCCCCAGCACCACCCGCCCATGGCCCAGAACCTGCAGTACCCGGAGGACTCGGACGACGACAAGAAAGCCGGCCCCCTGGGTGGGAGCAGCTACGAGGAGGAAGAGGACGAGGAGGGTGGAGGGGGCGAGCGCAAGGTGGGCGGCCCCCACTCCAAGTACGACGAGGACGCCAAGCGGCCCTACTTCACCGTGGACGAGGCCGAGGCCCGTCAGGACGGCTACGGGGACCGGACTCTGGGCTACCAGTACGACCCTGAGCAGCTGGACTTGGCCGAGAACATGGTCTCTCAGAACGACGGGTCTTTCATTTCCAAGAAGGAGTGGTACGTGTAGACCCCTGTCCAGAGCCTCCGTCCCAGCCCCCACCCGCACGCCCCCTGCCCGGCCCCACCGCCCACTGCTCCAGGAGCTCGCCAGAGACTCACGCAGCTGCCCGGGGAACCTGGGAGCCCAGGGCACACGACCTGGCTTTGTTTTGATTTCCTCCCTGCCCCCTGCCCTGCCCCATGGTGTTGTGTTCACTGTGGCTTCGGTGTTGCTGTACCTTTCCTTCCCAAACCACCCCCTTCCTGCCGCCCTCTGCAGGGAGCCCTGCTCTTGTCTTGTGTACCTGGGCGTCCCTCCAGGGTTTGGGGAGCCAGCCCTCCCCTGCCCCCAACACTGGAATTTGTTCGTGTCCTTCCCCTTGCTGGTGGACGGCTGAAGGGGCTCCAAGAGGAACAGCCCCCTCCCTGGACCCCAGATGCTGCTCGTTTTTCCCTGGGAGAGGGAACCCAGCAACCTCCCCATCCCACCATGAGCTGACACAGTGGGAGTTTGGACCCCTGGTCTAGGCAGCAATGGCACGCAAGAGGTAGGGGGTGGGGACGGCTTTTCCAAAGCACCCAGGGCTGTCTTTGTTCATTAAGTGAATCAAGTTGAGGTCCCCACCTGGAGCCTTGGGCAGTGTGTTTTCTTGAAGGCTGGTTTTACTTTTTTTTTTCCCTCATCAGCCTCCCAAGAGTTAAGTTGGCACAGTTCTGGTGGTTCCTGTTCGCCTGTCTGCACCCCACATAGCAGGACTCCAGGTCACTCTGGCCCACACTTCCCATCACCTCTACCAACACATACCCACACCTACATGCACACACAGGTCATTCGTGTCTACCCCTGTACTCCCCCTGGGGTCACATGCCTTACCCAGGCTGGACACTGCCCAAGGCCCGCCTCTCTGCTCCATCTTGCCCCTCCTTCCAGCGGAGAATGGGACAGGGGCAGGGGTCGGCCTTCAGAAGCTTCCAGGGAGAGCTGAGGCAAGCCCCCTAGGTGCCTCCACCCTAGCATCTCAGGCCGGCCCTTAACCACTTCCTACAGCATGGAAGTTTCTTGAGTTTCTCCCTACCTATCAAGTGCTAGCAACTCTTGATTCTCTTGGGGAGTCCGAGCTGGGATCCCAGAAAAGAGTGACCTCCGGGAGTGGAGGAGGATCCACGCAGAGGGCACTGGAGAAGTCAGCAAGCACAGTTGGAGCTCTGCCATCACGGGCTGATGAGACTCTAGAGTGCAGGGAGCTCCTCGCCCACCCAAGAGAAGGACAGCATGAGGGGAGGCAGGGTCAAGGATCCTGAGTCAGCCGTTCCTGCAAACCACCCGCCCCGTCCTGCTCAGTTCTCCCTGGTCATCATTCTGGATGGGGTGGCGGGGGAACCCTGGAGATGCTTTCCCTTTGAGTTGTAGATTCCCTTCTTGAATGGGGCTCTGGGTTCCTGTCAATCACCCAAGACCGATGGTCTTCCCATGGACACCCTGGAGGAAGGCCCCTCCCGGGCCCCCTCTTCGTTCCCCCGGCTCAAAGTGCCTCAGTCCCTCCATCTGCCCAGCCCATCCCCCTCAGCACTCTGGATGGGAGAGACCCTGGGATGGGAGAGGCAGGTTCGTGTCTGCCCGCGAGGATTCTGGTGAACTCAGCCCAGGGTGCAGAGGCTCTGTGGGATGGCAAGTGTTGAGGGGAGGGAGGCAGACCACTCTGTGCCCCACGGGCACCAACCTACCCTTGCCATAGGCTTCCCAAGGGAGCCTCCAATCCCCTCTCCTACTCCTCCCCTCCTGGGTGCTGCTATTGAACCCCTAGCCAGCTCCATCTCTGCCCTGGCAACCCTGGACCCACCAGCTGGGTCACCCTTCTCACCCAGCCCCTGCTGCCCTAGCCCTAGTCCAGTCCACCCAGTAGCCACGTAGCAGAAGTCTGAAGCCATGCCAGCCCTGGGGCGGTGCTCCCCTCTCTTGGCATTGGGGGTACTGGATGGGGTGGAGTTGGGAAAAAATTCTGGGGTCTTTCTAGCCACAGGGCAGAGAGGGTGGAGGAGCTGGGCTGCATTTCCCAGCAGTATTAGTGTCCCCTCACCCCAGGGCAGAGGAGCTTTTCCATGTTACATCACTGCCCCATCCCACCTCATACCACTCTGGCCCCTCTGCTTGGCCCCTGTGCCCCCTAGCAGGAGGAAATCCCAGGGGCCTGCCAGATAGAGGCATTCTCCACCCCCTTGAAATCACAAGACTGAAAGGACTCCTCTTGTGTCTCCCTTATCCTGCAGTGCCACCCTCTCTTCCTCTTTCTGTGATGGACTTAGGAGGCCCCCAGGCCTAGCCAAAGCACTGAGTCCCCCTTAAGGCAACTCCCAGCCTTCCCCTCCAGCAAAGCACAAATTTGGGGGTCCGTGCCACATGTGTGGGCCACGTGGGAGGCTCCAGATTTGCCAGAGGCCCATCAGCAGCGTGCCCAGCTGGGGTGCTGCTACCTGGGGCCAAGAGCGGGTGTGAGGCCGGGGTCAGCACTTGGGCCTGCAGAGATGGGGTTTTGTGTGCCCTGCAAGTTTGTGGGGAGGTGGCTACTACTGCTGGACCCGCAGGCAGCTGGCATGGGGAGTGGGGGAGGGGGTCTGGCCCAACAGAGACCAGGACGTCTTGCTTCTCCTCCATGCCCCCAGCATGAACTGAGCTTCTGCCTTTTGCTGGAAATGAAATAAACTTGGTCTGCATTGTGCCAAGGCCTCCCCACTTGTCATCCTGCCTCTGTGACCCTCACGGTCCTTGCCCGCCCTCTCCCCTACTCCACCGATACCCCTCCTTTCCTTAAGATTTTGATATTGTTCTAATGTGTAACAACCCTCCGAGTCCCCTTTGATCAGAAGGATCTGAAGAGCAGCAGCACAGAATCGGGGAACGCAGGCACGTGCAGCCACGTCAGGCCCAGTCCATGCGTGCACGAGTTTGCACAGGTGCCCGGCACATACACGGGCGCTCACCCCCAGCCCCGCAGACACACCAGGGGGCTGGCCTGGACCTGCTGAAAGCCCTTCAGGAAAAATGGATATCCCAGCACTCGGGCCATAAGAAAGACTCACCCGGGCCCTGTGTCCCAGGCACGTGCCCCCCGCCCTCC EMBV3_23991 AAGACCCTGGCTCAGCAGACAGGCCGGAGGCCAGAGCTGGTGGAGCGCCTGATTGCCGTG Variant GeneID:510109|ABHD11:NM_001034372:128_cdna 257^430 1 EMBV3_42706 GeneID:510109 25 GENE ABHD11 MGC128235 abhydrolase domain containing 11 EMBV3_06313 CCTGAGGAACTCTGTGAGCTGTGTGGATGACACGAAAGATGAGGCACTAGCTGCATGGAA Gene BVT0102_068668 + 0 NULL GK000023.2:11373692-11530877 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134080 TCONS_00134082 TCONS_00134081 1 XLOC_081293 Coding TCONS_00134081 XLOC_081293 Coding Coding MDGA1 23:11530361-11537167 j TSS100025 1166 3 TCONS_00134081_5 81 4 0.829243203526818 0.00818022098053815 0.00531785713069465 0.00406026035369137 0.00577393708552808 0.0071398218408526 0.00328282118137833 0.00225785620216741 0.00278050790732313 0.00672588780609166 0.000809130693306969 3.58924230778885e-05 3.04304265853771e-05 0.00060756456118983 0.00149880653054016 0.000933277956879404 0 0 0 0.00399265922425044 0.0106592410912536 0.00885714112271945 3.17076138365621e-06 1.5722355700803e-05 0 0.0051027286704319 0.00562637069740775 0.00461122832249713 8.2209098487199e-06 4.34383244066381e-05 1.34808073835995e-12 NM_001192882.1 MDGA1 Bos taurus MAM domain containing glycosylphosphatidylinositol anchor 1 (MDGA1), mRNA. 0.0 1077 100.00 0.51114922813036 NM_153487.3 MDGA1 Homo sapiens MAM domain containing glycosylphosphatidylinositol anchor 1 (MDGA1), mRNA. 0.0 935 79.37 0.926243567753002 0 coding 0 0 1 1 -0.112631169488076 0.841712879970398 0.0455846367014727 0.582168937673552 GCCCTCCAGGCTCTCTGCACAAGCCAGTTCATCCGTGACTGAGTCTGGACTTTGCTCCCTCAACCTCCTGGTGCGGTCCCGGAGCAAAGGGGCCCTGGACACGCATGCTTGGTCCCTCAGCGGCAATAAGGGCAACGTGTGGCAGCAGGCGCATGTGCCCATCAACCCGAGCGGGCCCTTCCAGATTATTTTTGAGGGTGTCCGAGGCTCAGGCTACCTGGGGGATATCGCCATAGATGACGTCACCCTGAAGAAGGGGGAGTGTCCCAGGAAGCAGATGGATCCCAATAAAGTGGTGGTGATGCCAGGCAGTGGAGCCCCCCGCCAGCCCCTCCCACAGCTCTGGGGGCCTGTGGCCACCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGCGTGGCCTGCCCCCACCCCGCCCCCCCGGCACACCAAAGTGTCCGCATCGTACCAAAGACTGACCCCATGCCAGCCGGGGTGCCCAGGGGCAGGGCCGCCTGCCCAGGAGGGGGCCGGCATCGGCCGTGAGGAGGAGCAGAGAACAAGGACAAAGGCCCAACACTGAGGCCCCGGAGACGGTTGTTCGACACACGCACACACCCACACACCCACACACACACACAGAGATATATTAAAGCACAAGTTTCTATCCAACCTGCCAGCACCTTCTTTACTGCAGAGACAGGGGACTCTCCTGAATGACGCCCGCCCCCCAGGGACCTCAGCGCCACGTGGTCCTTGTTGGGGCTGCAGCCGCAGCGTGTTTCTGCCCTTCGTCTGGCCCCGACTCCAGGCTCAGCTCAGCCCAGTGGCTTCCCCAGCAGGAGCCAGAAGGGGAGTGGGCATAGGAGCTCTGACCTGGGCGGGACTCTGGGACTCCCTGGGATGGAGGAGGCCAGGGTCGGAGGGGCCCTGAGGAACTCTGTGAGCTGTGTGGATGACACGAAAGATGAGGCACTAGCTGCATGGAACCCTGTTCCCAGAGTGAAGGCCAGATGCTGGAGAGACCAGGTCACCCCCAGCGCCTGGCCCATTCACTCCTGGGGTGTCATATCCACGCCCTCCCCCACCACCACCACTGTGCCCCCTTTGAAAGGAGCCAGTGCAGGGTCTTGGGCCTGGGCAGTCTGAGGACTGACCCCTCCCCACCTTCCCCTCCCACTGCACCCC EMBV3_26264 CACCTATAAATATCGAGAGGACTTGTCTGCACATCTCATGGTAGCTGGCTGGGACCAACG Gene GeneID:510593|PSMB9:NM_001034388:104_cdna Constitutive 0 NULL GeneID:510593 23 GENE PSMB9 LMP2 MGC128062 proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) EMBV3_30747 AGATTGTGGAGTGCCAGGTGCTCACGAGAAGCAAGAGAGGCGAGAAGTATGGCTTCATCA Gene GeneID:514750|LOC514750:XR_084711:119_cdna Constitutive 0 NULL GeneID:514750 7 PSEUDO LOC514750 NULL similar to Peroxisome proliferator-activated receptor gamma coactivator 1-beta (PPAR-gamma coactivator 1-beta) (PGC-1-related estrogen receptor alpha coactivator) (PPARGC-1-beta) (PGC-1-beta) EMBV3_42445 TTAGGGAGACATTACTGGGAGGTGGAAGTCAAAAACGTGATGGTGTGGGCTGTGGGGGTT Gene GeneID:100336788|LOC100336788:XM_002697556:351_cdna Constitutive 0 NULL GeneID:100336788 23 GENE LOC100336788 NULL butyrophilin, subfamily 2, member A2-like EMBV3_08877 AGATAACCATAGAGGAGGGCGAGCAGCGTGCCAAAGAACTGAGCGTGATGTTCATCGAGA Gene GeneID:526526|RAB6B:NM_001101129:31_cdna UTR3_Alt 2 NULL GeneID:526526 1 GENE RAB6B NULL RAB6B, member RAS oncogene family EMBV3_23483 ATATTCCTGGCATGAGAGAACCAACTACAAGGCGCTCACCAGGTATAAGGCGCCCACAGA Gene GeneID:100337154|LOC100337154:XM_002697848:586_cdna Constitutive 0 NULL GeneID:100337154 24 GENE LOC100337154 NULL serpin peptidase inhibitor, clade B like-like EMBV3_23899 ATCTGCAGGTGACCATCTTTGCCCTCCCAGAGGTCATCAAGCTTGCCGGGGACTTTGAGA Gene GeneID:100337417|LOC100337417:XM_002698499:592_cdna Constitutive 0 NULL GeneID:100337417 26 GENE LOC100337417 NULL hypothetical protein LOC100337417 EMBV3_04061 AACTCGCTGATGGCCCCGGTGGGCCGCTGGCTGAGCAAGGAGGATTTTGTCGAAGTTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08558 AGAAGTAGCAGAAGTGGCGTATAATGCAGAAGACTAACGCAGCTCCAGCAGTCCCTTCCA Gene GeneID:507462|SNX16:XM_002692833:192_cdna UTR3_Alt 3 NULL GeneID:507462 14 GENE SNX16 NULL sorting nexin 16 EMBV3_23111 TGTCTGTACTTGATCACACAACATCTTTATCCATATGGGGTATGGTCCACATCAGCCTCA Gene GeneID:281040|CAV1:NM_174004:15_cdna Constitutive 1 NULL GeneID:281040 4 GENE CAV1 NULL caveolin 1, caveolae protein, 22kDa EMBV3_08151 CCATGAGAGCGAAGTGGAGGAAGAAGCGAATGCGCAGGCTGAAGCGCAAAAGAAGAAAGA Gene BVT0102_039630 + 0 NULL GK000005.2:9511534-9793169 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195158 TCONS_00061936 TCONS_00190859 TCONS_00195157 TCONS_00123322 4 XLOC_117941 XLOC_037171 XLOC_116756 XLOC_074876 NonCoding TCONS_00195157 XLOC_117941 NonCoding NonCoding LOC100848780 5:57527832-57529326 j TSS145466 400 1 TCONS_00195157_2 91 4 0.73476222371065 0.0384481637069998 0.0256911816238444 0.0291630874416674 0.00895554604524822 0.0153649100311438 0.00064679001362271 0.0118222965765657 0.0160267490020465 0.0202354626753511 0.274541054840243 0.12625828971276 0.125952283660856 0.021433922876097 0.0657411614800719 0.0308289139493134 1.72946351494021 1.21924895980347 1.73878190445308 0.082077245679945 0.0595089732215297 0.0430140093636106 0.885045396609441 0.915045231212725 1.13782963872271 0.0262202537941705 0.0453494404978719 0.0201257685505897 0.333149303806813 0.30423405773854 0.593749498495722 XR_234605.1 LOC100848780 PREDICTED: Bos taurus uncharacterized LOC100848780 (LOC100848780), 0.0 708 100.00 0.9775 NM_001035267.1 RPL41 Homo sapiens ribosomal protein L41 (RPL41), transcript variant 2, 7e-93 343 80.40 0.975 0 noncoding 0 0 0 0 -0.908875689564482 0.0525145541847411 0.136834104173891 0.102797302810718 GAGCCGTAGAAACCTCTGCGCCATGAGAGCGAAGTGGAGGAAGAAGCGAATGCGCAGGCTGAAGCGCAAAAGAAGAAAGATGAGGCAGAGGTCCAAGTAAACTTGTACACCCATGGAAGCCACAGAAGCAGAAACAAGGGAAGCCAGAGGCCAGGGACGCTGGTACAAAGTGTGGACTGCATGCCTACTATCTAGAACTTATCAATGGATCTGGAACATCTATGGCCATTCTGATCACCTTGACCACCTTTGCGAGACCTACCTTGCTCATATCAAAGCCGTCCCTTTTGGTCCATTGCCCTGGACCTGTGATAACTATGGACTAGTTCTCTTCTCAGTTGTGGCTGAATGTAACGTGTACAATAAATCATCTCTTTTGCTGTCTTAGCGGAAGAAAAAT EMBV3_09065 AGCTCTAGGAGACAGGACTACACGGCCCGAGCATCAGGGAGTTTACCTTCCAGTGAGAAT Gene BVT0101_041952 + 0 NULL GK000003.2:15725511-15780761 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24120 GCATGCAGCTTGTCCTCAGTTGTTGGGTTGCTGGATTCTTTGTCATCTTTCCACCACTCC Gene GeneID:788285|LOC788285:XM_002687617:740_cdna Constitutive 0 NULL GeneID:788285 5 GENE LOC788285 NULL similar to olfactory receptor 810 EMBV3_13360 AGGAAAGATTCTGTTTCCCTACTAAGGGTGGGATGGGTTACTATGCTCTGGGTAGCTTTC Gene GeneID:510567|TMEM209:XM_002686941:66_cdna UTR3_Alt 2 NULL GeneID:510567 4 GENE TMEM209 NULL transmembrane protein 209 EMBV3_20223 AGAGAGGCCACATCGTGTCCAGTAGTCACACATCCAGTTAGTGGCGGCTGAGGTTCTGAT Gene BVT0102_427675 + 0 NULL GK000019.2:25815846-25839346 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09292 GAACAAGTTCTACAGCGGGACTGGCTTCAAGTTCCTGCCTTTCTCCTTTGAGCACATCCG Gene GeneID:286768|ATP6V0A1:NM_174754:46_cdna Constitutive 0 NULL GeneID:286768 19 GENE ATP6V0A1 NULL ATPase, H+ transporting, lysosomal V0 subunit a1 EMBV3_25927 GCCATGGAGGATACTAGCCCAGCCTAGCAGAAGAGTGCAATATGTACAGCATACTTTGAC Gene GeneID:509717|CCNC:NM_001034358:2_cdna UTR3_Alt 2 NULL GeneID:509717 9 GENE CCNC MGC126915 cyclin C EMBV3_33017 ATGGCAAATTTTAAATGTTTGTCTTTAAAAACTTATTTGGGTAGTTAAATTGTGAGATTA Gene GeneID:614573|SLC16A7:NM_001076336:61_cdna Constitutive 0 NULL GeneID:614573 5 GENE SLC16A7 MCT2 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) EMBV3_39686 CAACAGCTGCAGAGTGGACGTCTTCACTAAACTGGGCTACCGAGGTTTCTCTCTGTCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36852 CATTGTACGGAAGGAAACAGGTGAAATTACATTTGGCAAAGTCTCCTTGGAGGCACCAGG Gene BVV0102_161354 - 1 EMBV3_25082 GK000002.2:28310678-28400754 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104929 TCONS_00104930 TCONS_00104932 TCONS_00104927 TCONS_00104928 TCONS_00104931 1 XLOC_062476 Coding TCONS_00104928 XLOC_062476 Coding Coding B3GALT1 2:28397753-28449972 o TSS77572 4329 1 TCONS_00104928_4 326 0.0161700161700162 2 0.917135853537094 0.000739919624807405 4.31749592842003e-09 3.71274365983862e-07 1.39883980714325e-17 0.000508152913151003 1.42143477972651e-07 6.43536145030112e-05 1.23259823014514e-05 9.46777149512775e-07 5.06881513507442e-09 1.75525693035753e-13 1.56349610520602e-07 1.13242964697479e-07 1.76147320037721e-169 4.18774236101079e-05 0.000300686459313637 6.42954343078693e-07 1.01602558161056e-06 1.65192179266887e-19 1.06769586199519e-22 1.18634092939249e-07 2.91730278213188e-07 1.71543816429829e-39 1.19577018429931e-07 0.000494542726469014 9.02446463125983e-07 4.57255932446146e-36 4.26026743619743e-07 2.89936557309854e-22 2.39770792165984e-07 XM_005202397.1 B3GALT1 PREDICTED: Bos taurus UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (B3GALT1), transcript 0.0 7808 100.00 0.999768999769 NM_020981.3 B3GALT1 Homo sapiens UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (B3GALT1), mRNA. 0.0 2268 83.26 0.489027489027489 TCONS_00104928_4 sp|Q9Y5Z6|B3GT1_HUMAN B3GT1_HUMAN Beta-1,3-galactosyltransferase 1; 0.0 681 99.08 0.996932515337423 1 coding 1 1 1 1 0.0398688209856982 0.730681073829778 -0.00486667951360926 0.934869670410157 GTGACTTCAGTTTGCTAAGCAGCAGCTTCTCCTGGCATGAGCCACTGCAGATCTCCTCATCAGACGGGCTGAGACTATCCTGTGTGCCCTGCACTTGGAGTAAGGAGAACACAGCAAGAGTTTAGAGGAAGATTGATGAGGCATGGACCCTTGCTTCAGGTTTGGAGGAAAGTAGACTAAATACAGAGATGCCAGACAGCCACTGAGGCCCATGGACAGTCCTGCACTCACGCTGATCTGTCGAACTTTAAAAGTTCCTAGTACTATGCAACCTTTGCCAAACGAAAAGAAACTGATGCCGAGAAGGCATACTCTTCAATACTGGGAATAGACCTGCTCTCGGGACAATGGCTTCGAAGGTCTCCTGTTTGTACGTGTTGACCGTGGTGTGCTGGGCCAGCGCTCTCTGGTACTTGAGCGTAACTCGCCCCACTTCCTCCTACACGGGCTCCAAGCCATTCAGCCATCTGACGGTTGCAAGGAAAAACTTCACCTTTGGCAACATAAGAACTCGACCTATAAACCCCCATTCTTTTGAATTTCTGATAAACGAGCCCACCAAATGTGAGAAAAACATTCCTTTCCTTGTCATCCTCATCAGCACCACCCATAAAGAGTTCGATGCCCGCCAGGCGATCCGAGAGACCTGGGGCGACGAGAACAACTTCAAAGGGATCAAGATAGCCACCCTGTTCCTCCTGGGCAAGAACGCCGATCCCGTTCTCAACCAGATGGTGGAGCAAGAGAGCCAAATCTTTCACGACATCATCGTGGAGGACTTCATTGATTCCTACCATAACCTTACCCTCAAAACCTTGATGGGGATGAGATGGGTGGCCACTTTTTGTGCGAAAGCCAAGTATGTCATGAAAACAGACAGCGACATTTTTGTCAACATGGACAACCTTATTTACAAACTCTTAAAACCCTCCACCAAGCCACGAAGAAGGTATTTTACTGGCTATGTCATCAACGGAGGGCCCATCCGAGATGTCCGCAGTAAGTGGTATATGCCCAGGGATTTGTACCCTGACAGCAACTACCCGCCCTTCTGCTCGGGGACCGGCTATATCTTTTCAGCTGATGTGGCTGAGCTCATTTACAAGACCTCACTCCACACCAGGCTGCTTCACCTGGAGGATGTGTATGTGGGACTGTGTCTTCGAAAGCTGGGCATCCATCCTTTCCAGAACAGTGGCTTCAATCACTGGAAAATGGCCTATAGTTTGTGTAGGTACCGCCGAGTGATCACCGTGCATCAGATCTCTCCAGAAGAAATGCACAGAATCTGGAATGACATGTCAAGCAAGAAACATCTCAGATGTTAGTGTTTTTACCAATGTAAATATGTGTTTCTTTTCTTTTTTAAGAGATGAGGCTTAGGGTGTAGGTATTTTACAGGTGTCACCAAGGGAAATGAACTGGTGAAGGGGTTTATAAAAAGTATTTTTCTTCCCAATCCTAGTTCCTTTTTTGAATCGCCAATTTCCACACGTTAAGCTATGCTCATAGAAATAATACATGGGTTTACAAGGCCAGATTTCATTCTCAGGTCCTAAGGTACTGCATTTATCTCAAAAAGCAACTTCCTAACGAAGGCTAGGATTTACATACTGTGCATCTGAGATTAAAAAAAAAAATCTGGTTCTGGGAAACTGGAACTCATTGTAATGTCTTCATATTCTTTCTGCAAAAGTAAATAACACTTTATCAAAAACAATTCAGAAACAGCACAGTCAGGGAGACACACTGGATGTGATGATTCATACTGCATGTGATGTTACATTGAACTTTTACATATATTGCCATGGAATGTGTACAGTATTTCCAGTACCACCAAGAAATGAACTTAGTACTGGTAGGGAGGCTGCAGTTAAGTAAAATGGAAATTTATACTTGAGCATCAAATATTCTCTCTGTTTGGAAGACAACTCTGCTTGCTCATCCAAGGGTTAAACCTGGTCAGCAGGTGGAATGTATATAAAATGCTTCTTAAAAAATAAACAGGAGATTTGTTTTTGCTCTTTCAGAACAAACATTACCTGGTGCCTCCAAGGAGACTTTGCCAAATGTAATTTCACCTGTTTCCTTCCGTACAATGTCACTAAATACCTTTTACAGTTTCTGGTTCAGACAGGCACATGTGTAGAAATGTCGGTAGGAGGCCAGAAGGATGATAAATGACATGGAGAAAAAATAGAAATTTACATGTGCATTATAATTAGCATGAGCTTAGCACTGGTGTCAAATGCCCCTTCCATACATTTACAAAGCTCATGAAAAAATATTTGAGGAGGGAGCAATGTTACTGAAGGATTTAGGTCTACTGTTGATAGATGCAATCTCTTTAACATCCGATACATTCAAGTATCTCTAACAGCAATGCTGTTCAGGGGTATTCTGGAAGCTCTGTGATTGAGGATTATGGGAAGGAAGGGTGGGGAAGCTTGAGTTCAGGTTCTATGGCTGCCATCATGTGAATCATGTAAGCCTGCAGCCTCACTTTGCTGTGCTTCCATACACTCATTTATAAAACAGCTGGAAAAAACACCTACCTTACAGGTGCTGTGAGAGCAAATTGCATTTGCTAAATATTTGGGGATCCTTAGTTTTAAAGGTGCTACTTTAAAGCAGTGTATCATGCATTATGCTAAATGTTAAAATAACTACATAATTGCCATGATGGTCATCAGTAGTAGTAACATCATTGTAGTATAATATCTGCCAAAATACAGATCAAATATAACAATTAGTGCACCTGATTCTTCTAAGACTGACTTTTCCTTGAATATGTTAGGTGTTTGGGAAGGCTTCGATTTCTCTGTCATTTCTTCTGGTTTCAATGAATAAGTTATTACTTCAGTGCATTGCCTTGATATCCCAGGATGCTGACAGGAAAGGCAGCTGCCTTTCTTGAGGGAGGAGCCTCTGGCTGCAGGTACATTATAGTCACTGAAGCATACGCTTTGCAAAATGTATCACATCCAGTTAGATCTCAGGAAACATTTGGTCTGGGTTCTCAGTAAGAACTTTGAAGCCTGGCAGAGGTAGTCCACCTCTGGCAGAAGAATAGACACTCAGCAAACCCACACATTGCACATTTCCAGCACTCATTAGAAAACTTCTGTTTGCTTCTGTTCAAAGAAAGCACCACAACTGAAAGAGTATACCTTTTTTTTAAACCTGCCCTTTGCAAGCCCCTCTGGGAGTTCATAGCAAATAAGCAGATGAAATGTACAAATGGAAATCAAGGCTTATTTCTTGAAAACACTGAATCTCTCATCTCCAGCCCAAGAGAACCTAATAGGAGACAGACCTTCCTGTCCCTTAATACATCTTCATCTCAAGTCAGCAGGACCACTGAGTTTGATTAGATAATAACATTAGGTAGCCTGGAGAAAGATGGATCAGCACAAGGCGAGCCACCCTCAAACCCCCAAGTCGCAACTGCTGTGAGTTCCAATCACTGGAAAAGTCTCACAACTCTGAACTTAGTTTGCCTGTCCATCATGTAGTCGAATCAAGGCCCAGTCTTATGCCAACGTCTTGCGTTTACCTTGTGCTCAGTCGAGCCACCTTCAGTGTTAAGGAACTGCACATTATAAACATCACATGTATACATCTGTGGGTCACTTATAAGTGTGTGTGAGTACATTATGAATAGAGCCCTAGTCTTGAAAAGGAGCAAAAATCGAGAATCATGTCTTAAAGAACTATTTCCTAACTTTTTTATGCTAAGTAGTACCCATGTGACAAACATGTAAATATTCATCAAAAACCATATGTATATATTTTTAAAGGCATTTTTTTCTTCTTCCCAGCTGTATGTATTGCTAGAATCTGCTTGCTATGTACATTTCCTTCTGCATGGAACTTGGTGAGGCAAGGTCATTTGTCCAGTTTCAATAGCCTAAAGCATGGTTGCCCTTTGTTTTTTGAATGTTCCAAAAATGTTTAAATCAAGTGATCAGGAAAAAGCTCTAATTTTCTACTTTTGCTAATTTTATGACACTGGCCAAATTAGTATTAGTTAACAAATCAGTGATTTGTTAAGCCATTTTTAAACTTATTATTATTTCTTTGACATAAAATAGTGTTTCAGACAGCATTTTACCAGAAGTCAATTCAGACAATTTTAGGAAAACCTTCTCACTGTCCCCCAACTTGTTTTGTTCATTATGCATCAGATAACAAAAGATATCAATACTTCATGTCTATACTCTTAAATTTTCATTAAAAATTTTTTTTGGGGGGGGAATCTGTCTTTGGTGGCTAGTTTGTGTGGCTTTGTGTCTTCTTATATTGGAGCAAATGTCAGTTTCAATATAT TCONS_00104933 s 5' 0 TCONS_00104933 s 5' 0 EMBV3_14053 GGTCTTCCAGGACGAGACGGGCAAGAACCGGGAAGAGCATCACCCCTCAGTGCCTTACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23631 TGTGTCTATGAGGGAATCTTCCACCCGAGGCAGCAGAATCCACAGACCCCTTAAGGCGCA Gene BVV0102_278114 + 0 NULL GK000009.2:103566014-103842590 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24277 CAGAAGAGGACCAACATCTGCTGCAACCAAGGCATGGAAGAGTTTCCACTGGGCTAAGGA Gene BVT0102_303171 + 1 EMBV3_32236 GK000013.2:47256121-47400412 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32279 CCGTGGTGGCCGACACGGGCGACTTCCACGGTCACAAGAGGAACAGATTACAAATGCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07293 AGTGTTCCCACTGATGTAAAGGAAGTGGAGAAGCAGTTTAACGCGAAGAAAGCGGGGAGG Gene GeneID:784682|LOC784682:XM_002697594:56_cdna Constitutive 0 NULL GeneID:784682 23 GENE LOC784682 NULL similar to predicted protein EMBV3_12397 AGAAACTGGCAGCTCTCTTGCAAAACAAGATGACGTCCTCGCTCCAGGGAAACGCCAACC Gene GeneID:532761|OVOL2:XM_002692131:96_cdna Constitutive 1 NULL GeneID:532761 13 GENE OVOL2 NULL ovo-like 2 (Drosophila) EMBV3_31551 ACTTCTCTCGGTGTCTCTGCGGTTACCTCAAGCAGCTGAACCACTGATCCAACACTAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41981 CAGCTCGGAGGGCATCGAAACAGTCTCCGTTTACACATCTCTTCACACCGTGCATCTGAA Gene GeneID:537096|WDFY3:XM_002707826:48_cdna Constitutive 0 NULL GeneID:537096 6 GENE WDFY3 NULL WD repeat and FYVE domain containing 3 EMBV3_22297 TCCCACTAGGTGAGTTGGAACCTGGGAAACTGATAGAATCAATGGGAGAATTTGATGCAG Gene GeneID:515030|ACMSD:NM_001075694:2_cdna Constitutive 0 NULL GeneID:515030 2 GENE ACMSD MGC151926 aminocarboxymuconate semialdehyde decarboxylase EMBV3_38755 TGTCTTCTGGCCGACAGAGGTCCTCATTCCCGCTGAGCCCTGGGACTCCTCCGTTTCAGT Gene BVT0102_249749 - 1 EMBV3_26165 GK000014.2:2267665-2281658 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054265 1 XLOC_032074 NonCoding TCONS_00054265 XLOC_032074 NonCoding NonCoding - 14:2269873-2270684 - TSS39942 811 2 TCONS_00054265_3 95 0.150431565967941 1 0 0 0 0 0 6.08777206219859e-06 8.82135294695863e-06 0 0 0 0 2.82266962147868e-06 8.81798309979579e-06 0 0 0 9.77000726406675e-05 0 3.09382298988767e-05 0 0 0 0 0.000395921729867378 0.000413431500611416 0 0 0 4.73744762603954e-05 0 1.48266938693628e-05 XR_246084.1 C10orf40 PREDICTED: Homo sapiens chromosome 10 open reading frame 40 (C10orf40), transcript variant X1, misc_RNA. 4e-11 73.4 77.19 0.13193588162762 0 noncoding GGCACCCACTTTTTATAGAGCTAGAATTCACACATCATAAAATCCACCATTTTAAAGCACACAATTCAGTGCTTCTTAGCATATTTCTAAGGTTGTAGAACCTTCCACACTAATTTGAGCATCGTCAAGACCCCCCCTCCCCCAGATGTCTGCTGACGCTGAGCACCACGCCAGGGAGGCCGCCTGTGTTGCATGGACCTCAGCTCAGGCAGCCTTCACCGCGTGAACAGAACGCCGTGTCCTTTCCACGATTCTGCCCTCCACCTCAAGGGGCTGGCAGCTCAGGGCTGGGCACGGTCCTGTGCTTGTCTTCTGGCCGACAGAGGTCCTCATTCCCGCTGAGCCCTGGGACTCCTTCGTTTCAGTGGCTACAGCTCAGGCCACCCTTGGAGACTCCCGGGAACTGCTGATGCTGTGGACCAGTGACTGCCTGCGTTCAAGGCTCCTCCCCTTCCTGAATGGACACATTCACGTGGTCATCTGCTCTTGCTGGGGGAGGAGGCAGCATCTGGGGAGGCCGGAACCTGTCAAGTTTAGACTGTGGCCGTGTGGACACGCACTGGTGCCGACAGAAGGCCACAGGCCAGGGATCCTGGCTCCATCTGGAGGCAGCAACTGAGCACAGCCTAGCTTGGGGGTCAGAGGGCCAGCTGGTCAGCTACGGCAGACATGAGGCTGCCCAGTGTCCCTGCTTTGAGTGCCAGAAATCCCTCCAGAAATTTCAGTGGACACAGAGCCAGCAGTGAACCACCACATTTCCTGAAGTCCCCTGATGTCGGGGGTGACCTGTGACTGATTCCAGCACGCCACC TCONS_00052606 TCONS_00052607 . 5' 1295 TCONS_00052606 TCONS_00052607 . 5' 1295 EMBV3_14472 CAGGTAAATTATTCTTCTTAACCCCCACTCTACACCTCAACCTAGTGATTAATGGTCAAG Gene GeneID:100140861|KLHL23:XM_002685284:76_cdna Constitutive 2 NULL GeneID:100140861 2 GENE KLHL23 NULL kelch-like 23 (Drosophila) EMBV3_09730 AGACGCATCGGCGGCCTGCCCTGAAAGGAAGCGGCCGCTGGGAGACTCGCTGAGCTGGGT Variant GeneID:510809|MIS18A:NM_001098010:28_cdna 222^290 2 EMBV3_12864 GeneID:510809 1 GENE MIS18A NULL Protein Mis18-alpha EMBV3_10311 CAGCAGAGCCCACCAGCACTCCATGGAGATCCGCACCCCCGACATCAACCCTGCCTGGTA Gene GeneID:286856|PRLH:NM_174790:2_cdna Constitutive 0 NULL GeneID:286856 3 GENE PRLH PRH prolactin releasing hormone EMBV3_11627 GACCATTCAAAAAATAAAGCAAAAAGCAGACCACGACCTTACGAACACCAAAGAAACGTC Gene GeneID:533297|CSDA:NM_001098074:101_cdna Constitutive 1 NULL GeneID:533297 5 GENE CSDA MGC148333 cold shock domain protein A EMBV3_38432 ACACTGGGGAACTTTGAAGTGTGGTGAGTCAGGGGCATGCAGGATATACGATTCCAACAG Gene GeneID:282472|SLCO1A2:NM_174654:10_cdna UTR3_Alt 3 NULL GeneID:282472 5 GENE SLCO1A2 SLC21A3 solute carrier organic anion transporter family, member 1A2 EMBV3_26899 GGTTCCCCGACACTGGATTCCGAAGATGAACCCAGTCATTCATAAGTTCCTTTACACGGC Gene GeneID:530397|TDO2:NM_001046313:114_cdna Constitutive 0 NULL GeneID:530397 17 GENE TDO2 MGC137308 TRPO tryptophan 2,3-dioxygenase EMBV3_30852 TGACATCAAGACTGCGTTCAGCGACTGTGCCTCCACACCACCAATCCTGGGGGCTGGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29677 CACAGAAAGCAATTATGCTCCCTGCTCCCAGGGTTTCTAGTATGGAAAGTCCAGTAGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28555 TGGAACGAGGTACCAAAGGCGAAAAATCCAACAGGAGACACAGACACACCCAACCTCTCT Gene GeneID:530050|MYH11:NM_001102127:350_cdna Constitutive 0 NULL GeneID:530050 25 GENE MYH11 MGC137876 myosin, heavy chain 11, smooth muscle EMBV3_15196 TCGTACCACTGAAGGAGAAGAAGCTCCTGGAAGTCAAACTAGGGGAGTTGCCAAGCTGGA Gene GeneID:506492|ATP5J2:NM_001113719:104_cdna Constitutive 2 NULL GeneID:506492 25 GENE ATP5J2 MGC133672 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 EMBV3_15766 GAGCTCCAAAATGTGTGTTTCCTTTGTAGTGGTTGCCTGGATAGTGGGGATAATCCATGC Gene GeneID:785723|LOC785723:XM_002690706:350_cdna Constitutive 0 NULL GeneID:785723 10 GENE LOC785723 NULL similar to olfactory receptor Olfr1279 EMBV3_22236 TGAAAATGCATGATTTGAACACTGATCAAGGTGTATACCCTGTCGGTGTCGGGAGACCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32847 GGGTGGCTGGTGGTGAGGAATGTTGTTACGAAAATAGAGTCAGAATAGGAGGAGAGAGGG Gene GeneID:613943|ZDHHC22:XM_002691097:236_cdna Constitutive 0 NULL GeneID:613943 10 GENE ZDHHC22 NULL zinc finger, DHHC-type containing 22 EMBV3_04673 AAGACTAATTATCCTGATTCAGCAGGCAAGTTGTTACCACTGACTGAAGAAGAGAAAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16075 TCCCTAGAGGAAGCCAAGAAGAAGAAAGAGCTTGAGGAGTTCCTAAACCAGAGCTCCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07460 TGGGGCGGCACAATGTCACCGACGTGGCTTTTGGCTTTTTTCTTGGCTACATGCAGTACA Gene GeneID:541021|PPAPDC2:NM_001024573:59_cdna Constitutive 1 NULL GeneID:541021 8 GENE PPAPDC2 NULL phosphatidic acid phosphatase type 2 domain containing 2 EMBV3_13724 CGGCAGCTCTCCACACTTCCGTTTTGGTGGGAACTTCTCTTCCGGAGAATTGGAACACGT Gene GeneID:510159|MAPRE2:NM_001034374:82_cdna UTR3_Alt 2 NULL GeneID:510159 24 GENE MAPRE2 MGC127154 microtubule-associated protein, RP/EB family, member 2 EMBV3_07557 CCAACAACTTGCTCATCTCTTGTGCCGTCTCTTACCGAGGGGCCTGGTGGTACAGGAACT Gene GeneID:282654|TNXB:NM_174703:51_cdna Constitutive 0 NULL GeneID:282654 23 GENE TNXB TNX tenascin XB EMBV3_13239 CTGCAAGACTCACAGAACAAAAGCAAGGAATTGCTGATTCGGGGGAGGGCTGGTGATGAG Gene GeneID:615264|EYA2:NM_001035464:1294_cdna Constitutive 0 NULL GeneID:615264 13 GENE EYA2 NULL eyes absent homolog 2 (Drosophila) EMBV3_04421 CTAAGGAAGAGATCCCTCCGACGAAAGAGCCCAGCAGGCGGCACTGACCTTTGTAAAATT Gene GeneID:512628|C21H14orf79:NM_001075573:223_cdna Constitutive 0 NULL GeneID:512628 21 GENE C21H14orf79 C14orf79 MGC139827 chromosome 14 open reading frame 79 ortholog EMBV3_18133 CTAGACAGCTCAGAAGTTTTAAATGGATTATTCTCCAGGGGCGGAGGATGGCCAGTGACC Gene BVT0102_192003 + 0 NULL GK000018.2:12435115-12952031 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37885 GATGCCGGCTGGGCCACGCGAGAATACAAGATCTATCCGTATGACGCCCTTATTGTCACA Gene GeneID:618227|LOC618227:XM_002688480:10_cdna Constitutive 0 NULL GeneID:618227 6 GENE LOC618227 NULL similar to actin binding LIM protein family, member 2 EMBV3_15024 CAGAAATCTGTATCTGGATTTTGGTGGTCCTGAAGGAGAACTGACCATGGACCTGCACTC Gene GeneID:786534|SNTB2:NM_001105466:489_cdna Constitutive 0 NULL GeneID:786534 18 GENE SNTB2 NULL syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) EMBV3_30395 TAAGAGATCCCCAGACCTCTTCCAGCCTTTGCCTCTGTCGCTGACTCCACCCTAAGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08370 TCATAGACATCACCCTCCAGACCCGAACTCTGCTCGATGACGAGAATGACAGCCTGAGAT Gene GeneID:524917|MRO:NM_001034552:125_cdna Constitutive 0 NULL GeneID:524917 24 GENE MRO MGC165702 maestro EMBV3_06031 CCACTCACAACAGCCGAAAGGTGGAAGCAACCCAAATGCCCATCAACAAAGAAAGGGGTA Gene BVT0102_083045 - 0 NULL GK000030.2:142912798-142955745 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27287 AGCTGTGCCTAGCTCCCAGCAGAGGTCCCCAAGGACAAAAGAGGAAGAAGAGGCTTCAGA Gene GeneID:615670|BSND:XM_002686389:228_cdna Constitutive 0 NULL GeneID:615670 3 GENE BSND NULL Bartter syndrome, infantile, with sensorineural deafness (Barttin) EMBV3_02411 TGGACTTCGACGAGACCTTCCTGGCCACGTCCTTCCTGCAGCACCCTTGGGATGAGAGCA Gene GeneID:505891|FOXJ1:XM_002696170:136_cdna Constitutive 0 NULL GeneID:505891 19 GENE FOXJ1 NULL forkhead box J1 EMBV3_05607 CAACAAGTCAAGCTCTCCATCTTGGTACACAAACACTTCTACAACTGGTATGGAGGTCAC Gene GeneID:523902|VRK2:NM_001075851:122_cdna Constitutive 0 NULL GeneID:523902 11 GENE VRK2 NULL vaccinia related kinase 2 EMBV3_14142 TTGTATAAGGTCCTTTGTTTTTGTGTGTGTGTGCATTTAAGCAGTGTTGAGTTGGCATAG Gene GeneID:539983|S100PBP:NM_001034687:163_cdna Constitutive 1 NULL GeneID:539983 2 GENE S100PBP MGC128690 S100P binding protein EMBV3_15417 ATGAGTGACACGCGTTCTACCAGCTTAGAGATGCGGAGACAGACTGCAAAGAGCCTAGAA Gene BVT0102_227852 + 0 NULL GK000016.2:51947504-51963930 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067493 TCONS_00067491 TCONS_00067492 TCONS_00067490 1 XLOC_041465 Coding TCONS_00067491 XLOC_041465 NonCoding Coding - 16:51948638-51955568 - TSS50737 751 1 TCONS_00067491_1 54 0.428761651131824 3 0.892047914561986 0.000634799686274919 0 0.000455918946516615 0.000243024399580192 0 1.4353094957871e-18 6.98825889313609e-05 0 2.00884066597479e-09 0 5.18409169723089e-10 0 7.86938032475751e-10 0 2.82286984979584e-16 0.00591367939284705 1.85061726737773e-18 1.8890351100051e-06 0.000243472797193456 0.000880970558596575 4.77021217935499e-29 0.000620780189970912 0.000156656411579 0.00086221064283147 0.000350566562611697 8.85929376668449e-05 9.86244461722862e-05 0.00031196707378134 0.000354668459469653 0.00014405326966976 XR_228085.1 LOC101902612 PREDICTED: Bos taurus uncharacterized LOC101902612 (LOC101902612), 0.0 1000 100.00 0.736351531291611 0 noncoding 0 0 0 0 -0.234732474368372 0.191033311502251 -0.00137018703026082 0.97888650688186 NNAAATACAGGTTCCAGCCCAGACTCGCTGAATTGAAACTCCAGCAGTCTGAGCTCACAGTCCGGGTAATTCAGGTGAGCGCGAGTCTGCGAGCTCCCGGGCTAGGGGACAGCGGCAACGGGTCGCCCCTTCGACCCTGGATTCCGAACGGCGCTCGGAATGAGTGACACGCGTTCTACCAGCTTAGAGATGCGGAGACAGACTGCAAAGAGCCTAGAACCCGGCGAAGGTCACAGCCGTCAGGTCCGGACTCAGCGGCCCTCCTCTCCGTGCAGAAGGCACCGTTTTCTACCTGTAACCCTAGACGGGCTTCCTTCCAGGTGATCCTGAGGGTCTCTCCCCCAGCACCGCTGGCACTTGGATCAGGGAGAAGACCCTCTGGAGTCTCATCGTCACCCAGGGTCAGCAGCCTCCTCTGGGCGTGGACCTGGCTTACAGGGAATGATGTTGGATTCATGATCTCCAAAGAAAATTTAGCTTCAGGACCAGGGACCAGGCTTGATCACTCAAGAGCTTTTGTGTAGCAGAGTTTTATTAAAGTGAAAAAGGGACAGAGAAAGCTTCTGACATAGACATCAGAAGGGGGACAGAGAGTGCCCCCACTTACTACCCTTATCAAGGCCTTATATACTTTTACCAGACCCACTCTCACAACATCTTAAATTAACAAGACTAGAACTAACAATAGACAGGTTTTACCAGACCCACTCCCACAACATACATTTTAAGACGATAGGATTAGTCAGAAGGT TCONS_00069513 TCONS_00069514 TCONS_00069515 r 5' 1136 TCONS_00069513 TCONS_00069514 TCONS_00069515 r 5' 1136 EMBV3_05033 CTCAGAGTTCGGACGACTCCTGGGCCACTTTGTTTGTAAGCCTCATCTGTGCCTCAAAAT Gene BVV0102_368898 + 0 NULL GK000016.2:42040600-42081244 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069182 TCONS_00069185 TCONS_00069186 TCONS_00069189 TCONS_00069188 TCONS_00069187 TCONS_00069181 TCONS_00069183 TCONS_00069184 1 XLOC_041886 Coding TCONS_00069189 XLOC_041886 Coding Coding VPS13D 16:42079660-42349474 = TSS51639 15236 1 TCONS_00069189_17 4095 62 0.943761049319343 0.000205370994556179 0.000167411876461001 0.000184065869233777 0.000240829346037164 0.000222613198464996 3.63757326249154e-05 8.4336317083005e-05 9.22777769743547e-47 2.55789025441944e-05 1.12127501083556e-98 1.78384346806107e-05 7.89730379454042e-06 6.29369862781456e-06 2.64871391867053e-05 4.61169938395984e-05 6.29900850443899e-09 2.699988871019e-05 0.00136951539010659 1.79147031118257e-09 3.76770406366449e-09 8.36440772686697e-09 6.81349357898161e-09 0.000426131170329946 0.000747682600225733 3.79667665577729e-05 0.000121871895895733 5.50076817964254e-10 0.000328147565735287 3.22293064149482e-05 0.000225854302435249 NM_001192767.2 VPS13D Bos taurus vacuolar protein sorting 13 homolog D (S. cerevisiae) (VPS13D), mRNA. 0.0 1.442e+04 99.95 0.525203465476503 NM_015378.2 VPS13D Homo sapiens vacuolar protein sorting 13 homolog D (S. cerevisiae) (VPS13D), transcript variant 1, mRNA. 0.0 1.052e+04 89.16 0.525269099501181 TCONS_00069189_17 sp|Q5THJ4|VP13D_HUMAN VP13D_HUMAN Vacuolar protein sorting-associated protein 13D; 0.0 5112 93.03 0.651282051282051 0 coding 0 0 0 0 0.353261920614534 0.442915372739487 0.00539264908399002 0.906075214614412 ATGTTGGAAGGTCTTGTAGCCTGGGTTCTTAATACCTACCTGGGGAAATATGTCAATAACCTGAACACTGACCAGCTCTCCGTCGCGCTTTTGAAAGGTGCTGTTGAATTAGAAAACTTGCCTTTAAAGAAAGATGCCTTGAAAGAACTGGAATTACCATTCGAGGTCAAAGCTGGCTTAATTGGGAAGGTGACCCTTCAGATTCCCTTCTACCGCCCCCATGTGGACCCTTGGGTGATCTCCATCTCCAGCCTTCATTTAATTGGAGCCCCTGAAAAAATACAGGATTTCAATGATGAAAAGGAGAAGCTGTTGGAAAGGGAGCGCAAGAAAGCTCTCCTTCAGGCTCTGGAGGAAAAATGGAAGAACGAACGCCAGCAGAAAGGGGAGTCTTATTGGTATTCAGTCACTGCCTCAGTAGTTACGAGGATTGTGGAGAACATTGAATTAAAAATTCAAGATGTCCATTTGCGCTTTGAAGACGGTGTTACCAACCCTTCCCATCCTTTTGCATTTGGCATCTGCATTAAGAATGTATCCATGCAAAATGCCATGAATGAGCCTGTACAGAAATTAATGCGGAAAAAGCAATTAGATGTGGCAGAGTTTAGCATCTATTGGGATGTCGATTGCACTTTATTGGGGGATTTGCCTCAGGTGGAGTTACAGGAGGCCATGGACAGGAGCATGGAGAGTCGTGACCATCACTACATCTTGGAGCCCGTGTGTGCATCTGCTCTTCTGAAGAGAAACTGCTCCAAAGAGCCTCTGCGCTCTCGGCACACTCCCCGAATTGAATGTGATATTCACCTGGAAACCATTCCCTTGAAACTCTCTCAGCTGCAGTACCGGCAAATCATGGAATTCCTCAAGGAGCTGGAGCGAAAGGAGAGGCAGGTGAAGTTCCGAAAATGGAAACCCAAAGTGGCCGTGTCTGAGAACTGCCGAGAGTGGTGGTATTTCGCTTTGAATGCCAACTTGCACGAGATCCGGGAGCAGAGAAAGCGCTGCACATGGGGCTTCCTGTTGGGCCGGGCCCGTGATGCCGTGTCTTATACTGACAAGTACTTCACCACGTTGAGAGGAGGCTTGCTATCTGCAGACGACAAGGAGGAAATGTATCGGATTGAAGAGGAGCAGAGCTTTGAGGAACTGAAGATTTTGCGTGAACTGGTGCATGAACGGTTTCACAAGCAGGAAGAACTGGCAGAGAGCCTACGGGAGCCTCAGCTGGATCCTCTGGGAGACTCTCCTGGAGACCCAGGCCCCGGGGGAGGCAGCGGGATGCTGCAGTACCTTCAGTCCTGGTTTCCTGGCTGGGGTGGCTGGTACGGGCAGCAGAGCCCTGAAGGGAAGCCAGTGGAGGGCCTGATGGCAGAGCCGCAGGAGCAGTGGACTCCCGAGGAGATCCTGGGCTCCGAGGAGTTTTTTGACCCTACTGCGGACGCCTCTTGTATGAACACATACACAAAGCGAGACCATGTCTTTGCGAAACTGAACTTGCAGCTGCAGCGAGGGACTGTGACTCTGCTGCACCAGGAGCAGGGGGCTCCCCAGATGAACCAGAGTGCTTTCATGCAGCTTGAGTTTTCAGGTGTAAAACTTCTAGCAGAATCCCTTCCTCGAAGAAACTCCTCCTTGCTCTTAGTCCGGTTGGGTGGACTCTTTCTTCGAGACCTGGCTACGGAAGGAACCATGTTTCCTCTTCTGGTCTTCCCTAATCCACAAAAGGAAGTTGGCAGAGTCTCCCAGTCTTTTGGACTCCAAACAACGTCTGCAGACAGAAGCCATCATTATCCTGCTGCAGACCCAGATGACCCGGTTTTTGAGATGCTGTATGAGAGAAATCCAGTGCACAGCCATTTTGAGAGGCGGCTGAATGTCAGCACGAGGCCCTTGAACATCATATATAATCCCCAGGCTATTAAAAAAGTGGCAGACTTTTTCTACAAGGGAAAGGTTCATACCTCAGGTTTTGGTTATCAATCTGAACTTGAGTTGAGAGTGGCTGAAGCTGCGCGAAGACAGTACAACAGACTGAAGATGCAGACCAAGGCAGAAATCCGACAGACTCTTGACCGATTGCTAGTGGGTGATTTCATTGAGGAGAGTAAACGGTGGACTGTGAGACTGGACATTTCTGCCCCTCAAGTGATATTTCCTGATGACTTTAAGTTCAAGAATCCCGTGTTGGTTGTTGTGGATCTAGGAAGAATGCTGTTGACCAACACCCAAGATGACTCCAAGAGGAAGAGTGGGGACGGGTCAGCATTGGAAGAGAATCAGTTCAGTGATGATGAATATAAGACCCCTCTTGCCACACCTCCCAATACCCCACCTCCTGAGACTAGCAGCAGTAATGGGGAGAAAACACCTCCATTTTCTGGAGTCAAGTTCAGTGAAGAGCAGCTTCAAGCACATCTCATGAGCACGAAGATGTACGAGAGGTACTCGCTGTCCTTTCTCGACCTGCAGATCATGGTTGGACGCGTGAAGGACAACTGGAAGCATGTCCAGGATATTGACGTGGGACCGACCCACGTGGTCGAGAAATTCAACGTTCACCTCCAGTTAGAACGTCGATTGATTTATACATCAGATCCCAAGTACCCTGGAGCCGTCCTCTCAGGCAACCTACCAGACCTGAAGATCCACATCAATGAAGATAAAATATCTGCTCTGAAGAATTGTTTTGCTCTCCTGACCACCCCAGAAATGAAGACTTTTGACTCTCAGATGAAGGAGAAGATTTTTCCCCAAGGGGGACAGCGGGGAAGTTTGCAAGACTCTGTGATGAACTTGACCCAGAGCATTGTGATGTTGGAGCAGCATACTCGGGAGGTCTTGGTGGAGTCACAGCTCCTCCTGGCGGAGTTTAAGGTGAATTGCATGCAGCTTGGTGTTGAGAGCAACGGCCGGTACATCTCTGTGCTCAAGGTGTTTGGCACCAATGCTCACTTTGTGAAGAGGCCTTATGATGCTGAGGTCTCCCTCACCGTTCATGGTTTGCTCCTGGTGGACACCATGCAGACGTATGGCGCTGATTTTGACCTTTTGATGGCCTCCCACAAGAACTTGAGCTTTGATATCCCGACAGGAAGCCTCCGGGACAGCAGGGCCCAATCTCCCGTCTCTGGGTCCAACGTGGCCCACTTCACGAGTGCTGCCACACGGAACAACCAGTCAGCCACTAGTATTTCTCTGGACAGAGTTCTCACCAAAGAACAAGAGTCCCTCATAAAACTGGAATATCAGTTTGTGAGTTCAGAGTGCCCGTCCATGAATTTGGATAGCACCCTTCAGGTGATTTCATTGCAGGTGAATAATTTGGATATCATCCTAAATCCAGAGACAATTGTGGAGCTGATTGGTTTTCTTCAAAAATCTTTTCCCAAGGAAAAAGATGAGTTGAGTCCTCAACCTTTAATGACTGATTTTGAAAGAAGCTTTAGGGAACAGGGAACTTACCAATCTACATATGAACAAAACACGGAGGTTGCGGTGGAAATCCACAGACTTAACCTGCTGCTCCTTCGGACGGTGGGAATGGCAAATGGAGAGAAGTATGGCAGAAAGATTGCAACAGCGAGTATAGGTGGCACCAAAGTTAATGTCTCCATGGGCAACACATTTGACATGAATGGTTCTCTCGGCTGTTTGCAGCTTATGGATTTGACACAAGAGAATGTTAAGAACCAATATGTTGTCAGCATTGGAAATTCCGTAGGCTATGAAAATATCATCAGTGATATTGGCTTCTATGAATCTGTATTTGTCAGAATGGAAGACGCAGCCCTCACTGATGCTCTGAGTTTCACCTTTGTTGAGAAATCTAAACAGGAATGTTTTCTCAACCTCAAGATGGCCTCCTTGCATTACAACCACTCCGCTAAATTCTTGAAGGAGCTGACGTTGTCCATGGATGAGCTGGAAGAAAATTTTCGAAGTATGCTGAAAAGCGCAGCCACCAAAGTCACCACGGTCCTAGCCACTAAGACAGCTGAGTACAGTGAGATGGTATCACTCTTTGAAACTCCCAGGAAGGCCCGGGACTCCTTTTTCTTAGAAGAAAATGAACCATATGGGTTTGGCCTAGGTGCGTCTCATTCTGACACCGTAAAGCTCATCTTGAACATAAACATTGAATCGCCAGTGGTTTCCATCCCTCGGAAGCCTGGGAGTCCCGAGTTGTTGGTAGGACACTTGGGACAGATCTTCATCCAGAATTTTGTGGCAGGAGATGATGAATCCAGAAGTGACCGTCTGCAAGTAGAAATCAAAGACATTAAATTATATTCTTTGAACTGCACCCAGTTGACAGGCAGAGAGGGCCCCGGGCCGGAAATGAGCCGGGCGTTCTGCCCTCTGTCTGGGTCTGCCAATGCCAATAGTCAGGAAGAAGCTCACTTCACCCGACATGATTTCTTTGAATCTTTGCATAGAGGTCAAGCTTTTCACATCCTCAACAACACGACCATTCAGTTTAAACTGGAGAAGATCCCTATAGAGAGAGAATCTGAACTGACTTTCTCACTTAGTCCAGATGACCTGGGAGCTTCTAGCATCATGAAGATTGAAGGAAAATTTGTTAATCCGGTTCAAGTGGTGTTAGCAAAGCATGTATATGAGCAGGTTTTACAAACGCTGGACAATCTGGTGTATAGTGAAGATCTGAATAAGTTTCCAGTCAGTGCAGCCTCCTCACCCTGCCCTAATTCTCCTCTGCCTCCCCTCAGTACCTGTGGAGAACCTTCCGCTGAAAGGAAGGAGAATGGATTGTTCAGCCACTCCAGTCTTTCTAACTCTTCTCAAAAGTCCTTGTCTGTGAAGGAAGTCAAATCCTTTACCCAGATTCAAGCCAACTTTTGTATATCAGAGCTTCAAGTTCAGCTAAGTGGAGATCTGACCTTGGGGGCCCAGGGTCTTGTGAGCTTAAAATTTCAGGATTTTGAGGTGGAATTCAGTAAAGACCACCCCCAGACTCTGTCCATTCAGATTGCCCTGCGCTCTCTGCTGATGGAGGACTTACTGGAGAAAAATCCAGATTCCAAATATAAGAACCTGATGGTGTCTCGGGGAGCCCCAAAGCCATCTAGTTTAGCACAAAAAGAGTATCTCTCTCAGTCTTGCCCTTCTGTGTCCAACGTGGAGTATCCAGACATGCCTCGGTCTCTCCCTTCTCATATGGAGGAAGCTCCCAATGTATTTCAGCTGTATCAGAGACCCACCTCGGCCTCCCGGAAGAAGCAAAAGGAAGTCCAAGACAAGGACTATCCCTTGACCCCACCTCCTTCTCCAACGGTAGATGAGCCCAAGATACTTGCGGGAAAGAGTAAATTTGATGATTCCTTGGTCCATATCAATGTATTCCTGGTGGATAAGAAGCATCCAGAATTCTCTTCCAGTTACAATCGAGTTAACCGGAGCATTGATGTTGATTTTAACTGCTTGGATGTGCTGATCACACTGCAGACCTGGGTCGTGATCCTAGATTTTTTTGGAATTGGCTCCACTGCAGACAACCATGCGATGAAGGTGCCGCCTGAGGACGTCCTACAAAACGTAAAGTCAGAATCAAGTGCGTTAGCAGAGTCTGAACTTCAGGAGCCAGTTAACACCAAACTGGATCTCAAGGTTCATTCGCTTTCTCTCGTGCTGAATAAGACCACCAGTGAGCTTGCCAAGGCGAATGTGTCCAAATTAGTGGCACACCTGGAAATGATTGAGGGAGACCTGGCCTTACAGGGAAGCATTGGGAGCCTATCTCTAAGTGACCTTACCTCGCATGGAGAGTTCTACCGAGAACGGTTCACTACAAGTGGAGAAGAAGCCCTCATCTTCCAGACTTTCAAGTATGGCCGGCCTGACCCTCTCCTCCGGCGGGAGCATGACGTCCGAGTGAGCCTCCAGATGGCGTCTGTGCAGTACGTGCACACCCAGCGCTTCCAGGCGGAGGTGGTGGCCTTCATCCAGCACTTCACGCAGCTGCAGGATGTGTTAGGGCGCCAGCGAGCTGCCATCGAGGGGCAGACGGTGAGAGATCAAGCACAGCGCTATTCACGGGTTCTCCTGGATATTGAGGCTGGTGCTCCTGTTCTTCTTATCCCAGAAAGTTCCAGATCAAATAATCTGATTGTAGCAAATTTGGGAAAGTTGAAAGTCAAGAACAAATTTCTCTTTGCTGGTTTTCCTGGGACCTTTACCTTACAAGATAAGGAGTCTGTGCCTTCATCTTCCCCAACTGGTACTCCCAAGCGCAGTGTGAGGAAAATGACAAGCATGGAGGACCTGAAGGGGACCCACTCCGAGGGGCTGATCATGATGCCTCCTGCTGGAATGAGTCGAGGCAGCTTGAAGAGTGAGTCTGTGCCCAGCACCTCGACCAAGCAGCAAGGGCAGCCAGCCACAACCTCTGTCGGCCGAGCTTCCAGCAGTCCAGAAGACCACGTGTGTCTGCTGGATTGCATTGTTGTCGATCTCCAAGACATGGACATCTTTGCTGCAGAGAGACACCCACGAGAGTATTCCAGGGTCTCAGAAGACAGCAGCGGAGACCTGATCTTCCCCTCCTATTTCGTGCGACAGACAGGAGGAAGCCTCTTGACCGAGCCCTGTAGGCTGAAATTGCAGGTGGAAAGGAATTTGGACAAAGAAATAAGTCATACGGTGCCAGACATATCTATCCATGGCAATCTCTCCTCAGTCCACTGTTCTCTGGATTTGTGCAAGTACAAGCTGATCCGGGGTTTATTGGAGAACAACCTTGGAGAGCCCATAGAGGAATTCATGAGGCCTTATGATTTGCAAGACCCAAGGATTCACACTGTTCTGAGTGGAGAAGTATACACGTGCATGTGTTTCCTCATTGATATGGTAAATGTAAGTCTGGAACTGAAAGATCCAAAAGGAAAAGAAGCTGCTGGGTCCCTAGCCAGATTTGACTTCAAGAAGTGTAAACTGCTCTATGAGAGCTTTTCCAACCAAACCAAGTCCGTTAACTTGGTTTCCCATTCCATGATGGCTTTTGACACCCGCTCTGCTGGGCAGAAGACCAGTCCTGGTGTGACCAACGTGTTCACCTGCATCTTTCAGCCCTCTAAAAGCAGCAGCACCACCCAAGGCTCCATTCAGATTGAACTGCATTTCAGGTCTACAAAGGATTCCTCCTGTTTCACAGTTGTTCTCAACAATCTCCGTGTGTTTCTCATATTTGACTGGCTGCTGTTGGTGCACGATTTTCTCCATACCCCCAGTGATATTAAGAAGCCAGCTAAAGTTACTCCTTTTCGCCACCGTAACTCTAGCAGCGAATCTGCTGTAATTCCCAAAACTGTGAAAAGTGGAGTAGTTACCAAACGGTCTTCCCTTCCTGTGTCCACCGAAAGGCACCTGGAGGTCAAGGTCAACGTAACAGGCACGGAGTTTGTGGTCGTTGAAGATGTATCCTGCTTCGATACCAACGCCATCATTCTCAAAGGCACCACTGTGCTCACCTACAAGCCCCGATTTGTTGATCGGCCCTTTTCAGGAAGTTTGTTTGGCATTGAGGTGTTTTCGTGCCGACTGGGGAATGAGCACGACACAGCTCTTTCAATCGTCGATCCAGTACAAATTCATGTGGAGCTGGTGGGAAATTCTTCTTACCAGAATAGTTCAGGATTGATGGATGCATTCAATAGCGAAGATTTTCCTCCCATCTTAGAGATTCAGTTACAGGCCCTGGATATCAGACTCTCCTATAATGATGTTCAGCTGTTTCTTGCCATTGCAAAATCCATCCCAGAGCAAGCTAACGCTGCGGTGCCAGACGTGGCGGCCTTGGAGGCCAGCTCCGTTCACAGCTACCTTCCCGGTGCTTCTCGAGGGGGAGAGGAAGTCAGAGAAGGGACAAGACACACCTTAGACCCTGTTTTGGAATTACAGCTGGCTAGACTGCAGGAGCTGGGGTTTAGCACGGATGACTGCCGCAAAGCTCTCTTGGTGTGTCAAGGTAATTTGAATAAGCACACCCATGACCTCCGGATCCATCAACTGCAAGTGAGAGTGAATGGCTGGGAGCAAGTGAGCCCAGTGTCTGTGGACAAAGTCGGGACCTTTTTCCGATACGCTGCACCAGATAAGAATTCCTCATCCTCTACGATCGGCAGCCCGAGCAGCAGGACAAATATTATCCATCCCCAAGTTTATTTCTCTTCACTCCCACCTGTCCGGGTTGTCTTTGCGGTAACAATGGAAGGCAGTGCTCGGAAGGTGATCACGGTCCGATCAGCCCTCATTGTGAAGAACAGACTTGAGACGCCGATGGAACTGAGACTGGACAGCCCGTCAGCTCCAGACAAGCCTGTGGTCCTTCCCGCCATCATGCCAGGAGACTCTTTTGCTGTGCCTTTACACCTTACTTCTTGGCGACTGCAGGCCCGGCCCAAAGGACTGGGTGTGTTTTTCTGTAAAGCTCCTATTCACTGGACCAATGTAGTGAAGACTGCCGAAGTTAGTAGCAGCAAACGAGAATGCCACTCCATGGACACGGAGAAAAGCCGGTTCTTCAGGTTTTGTGTGGCCATAAAGAAGGAGAATTACCCAGATTACATGCCCTCCAACATATTTTCTGACAGTGCAAAACAGATTTTCAGACAGCCTGGGCATACCATATACCTCCTGCCGACAGTGGTCATCTGCAACTTGCTCCCTTGTGAACTTGATTTTTATGTTAAAGGAATGCCCATTAATGGGACACTGAAACCTGGCAAGGAGGTGGCTCTCCACACAGCTGATACCTCCCAGAACATTGAACTGGGGGTGTCCCTGGAGAATTTTCCACTCTGCAAAGAGTTGCTCATTCCACCCGGAACCCAAAACTATATGGTAAGAATGAGGCTCTATGACACCAATCGGCGGCAGCTGAACCTCACCATCCGGATTGTGTGCCGAGCAGAAGGATCTTTGAAGATCTTCATTTCAGCTCCGTATTGGTTGATTAACAAAACTGGGCTACCACTGATCTTCAGACAGGACAATGCAAAGACAGATGCTGCAGGCCAGTTTGAAGAACACGAGCTGGCCCGGAGCCTGAGCCCTCTCTTATTCTGCTATGCTGACAAAGAGCAGCCGAACCTCTGCACGATGAGAATCGGAAGGGGGATTCACCCTGAAGGCATGCCAGGCTGGTGTCAGGGCTTCTCCCTGGATGGTGGTAGTGGCGTCCGAGCTCTCAGAGTCATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAACATTGGTATTGATGTCAAGAAAGGCCGAGGCCGATATATTGACACCTGTATGGTCATCTTTGCCCCCCGTTACCTGTTAGATAATAAGTCATCCCACAAGCTTGCATTTGCACAGAGGGAATTTGCCAGGGGACAGGGAACAGCCAATCCTGAAGGTTACATTTCCACGCTTCCTGGTTCCAGTGTGGTGTTCCATTGGCCTCGGAATGACTACGATCAGCTGTTATGTGTCCGACTGATGGATGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAACAAAAATAATTCCTTCCATATCAACATGAGAGATACTCTGGGAAAATGCTTCTTTCTGCGTGTGGAAATTACTCTCCGAGGAGCTACCTACAGGATCTCCTTCAGTGATACAGATCAGTTACCCACTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCAGTTGTCTTCACTCAGCATGGCGTCGCTGAGCCCAGGCTCCGCACTGAAGTGAAGCCCATGACATCCTTGGATTATGCCTGGGATGAACCCACCCTGCCACCTTTTATCACTCTTACTGTTAAAGGGGCAGGTTCCTCTGAGATCAGCTGCAACATGAATGATTTCCAGGATAACCAGCAGCTTTATTATGAAAATTTCATTTACATTGCTGCTACATACACGTTCTCTGGTTTACAGGAGGGGACAGGACGGCCTGTGACTTCCAACAAAGCCGTTACTTGTGCCGAGCTCGTTTTGGATGTCTCACCAAAGACGCAGAGAGTCATTTTAAAGAAGAAGGAACCAGGGAAGCGCTCTCAGCTGTGGAGGATGACTGGAACAGGCATGCTGGCCCACGAGGGCTCTTCCGTGCCTCACAACCCCAGTGAGCCCTCGGCCGCCCGCTCCGCCGAGGGCTCTGCCATCTTGGATATAGCTGGTCTCGCTGCAGTCACTGACAACAGATACGAGCCGCTAATGCTTAGGAAGCCTGACCGTAGGCGGAGCACAACCCAGACTTGGAGTTTCCGAGAAGGGAAGCTGACCTGCGGGCTACATGGGCTGGTGGTCCAGGCCAAAGGAGGGCTCTCTGGCTTGTTTGATGGAGCTGAAGTTGTTCTTGGTCCGGACACTTCGATGCAGCTTCTGGGGCCAGTTCCACCTGAACAACAATTTATTAACCAAAAAATGAGGCCTGGTTCTGGAATGCTGTCCATCAGAGTTGTTCCAGATGGACCAACTAGAGCGCTCCAGATAACAGATTTCTCCCAACGGAAAAGTGACCGTTCATCATATGAAGTGGATGAACTTCCTGTTACTGAACGAGAGCTGCAGAAATTAAAGAATCCAGACACAGAGCAGGAATTGGAAGTGCTTGTGAAGTTAGAAGGTGGAATTGGGTTGTCTTTAATTAATAAAGTCCCAGAAGAACTGGTCTTTGCAAGTCTTACGGGAATCAATGTGCACTACACACAGCTGGCCACCAGTCACATGCTTGAACTTAGCATACAGGATGTACAGGTGGACAACCAGCTCATTGGCACGACTCAGCCCTTCATGCTCTACGTGACCCCTCTGAGCAACGAGAATGAGGTCATTGAGACGGGCCCAGCCGTGCAGGTGAACGCAGTGAAGTTCCCCAGTAAGAGCACGCTGACCAACATCTACAAGCACCTGATGGTCACGGCTCAGAGATTCACAGTACAAATTGAGGAGAAACTGCTCCTCAAGCTGCTGAGTTTCTTTGGCTACGATCAAGCCGAATCAGAGGTGGAAAAATATGATGAAAACCTCCATGAAAAGACAGCTGAGCAAGGCGGGACGCCAATCCGATACTACTTTGAGAATCTCAAAATCAGTATTCCCCAGATCAAGCTGAGCGTGTTCACCTCCAACAAGCTTCCGCTGGACCTCAAGGCCCTGAAAAGCACCTTGGGATTTCCATTGATTCGATTTGAAGACGCTGTGATCAATCTGGATCCATTCACTCGAGTGCATCCCTATGAGACCAAGGACTTCATCATCAATGATATCCTCAAACATTTCCAGGAGGAACTCCTCAGTCAGGCAGCCCGGATCTTGGGGTCGGTGGACTTCCTTGGCAACCCCATGGGGCTTTTGAATGACGTTTCTGAAGGGGTGACTGGACTGATAAAGTATGGAAACGTTGGGGGCCTTATAAGAAATGTTACCCATGGAGTATCAAATTCTGCTGCCAAGTTTGCGGGGACATTATCAGATGGCTTAGGGAAGACGATGGATAATCGCCACCAGTCGGAGCGGGAATACATCAGATACCATGCGGCCACGAGTGGCGAACACCTTGTAGCTGGCATCCACGGCCTGGCTCATGGTATCATTGGTGGACTGACCAGTGTTATAACCTCAACCGTGGAAGGTGTGAAAACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGGGAAAGGGCTTGTTGGCACTGTCACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACACAGCCACCCTTAGTGGCCCCAGGACTCAAGCACAGAGGGTACGGAAGCCACGCTGCTGCACAGGGCCCCAGGGCCTGCTTCCTCGCTACTCGGAGAGCCAGGCAGAGGGCCAGGAGCAGCTCTTCAAACTAACAGACAACATACAGGATGAATTCTTCATCGCAGTGGAGAACATCGACAGCTACTGCGTGCTCATCTCCTCCAAGGCTGTCTACTTCCTGAGAAGCGGGGACTACGTTGACCGAGAGGCCATTTTCCTGGAGGTCAAATATGACGATCTCTACCACTGCCTCGTCTCCAAAGACCACGGGAAAGTGTACGTGCAGGTCACCAAGAAGGCTGTAAACACGAGCAGCGGCGTGTCCATCCCGGGCCCTTCTCACCAGAAGCCTATGGTCCACGTGAAATCAGAGGTCCTCGCTATCAAGTTATCACAAGAAATAAACTATGCAAAGAGCCTTTACTATGAACAGCAGCTGATGTTAAGACTCAGTGAAAACCAAGAACAGTTGGAGCTGGACTCCTGAGAAACCCCAGCTGCTGGAGGGACATTCCCAAAGACAGACCCCCCACCAATCAGGAGGAGAGAGGCCCATGGGCTTGGCTTCAATTTGAGGAAACCAGAATAAGGTTTGGGGGATGATATCAAGAGGGGAAGTGAATACTGATGAGGGGGTGCAGATGGAACTGTATTCATTTGTGGGGCAAGGAATTGCTTTAGATTATGGGGAGGTAATTTGTAAAAGACATCGGTTGAATAACGTTTGAAAAAAAAAGCGTACCAAGATCAATCTAATTTTTAGATTGCCCTGTATTTTGTTAACATGTATATATTGATAAATATACAACTGTGTGTTTGTAAATATATAGAAGTGTTTCTGAACAGGGACTATGATGTGTGTAAAGGATTGTTAACTGTAAAGTAATATAAAATTATATTGGATCTTCTATTGCACTAATTCTACATGTCTAATTCAGGGTACTATCCATGAAGAGGGATTCTTGCAAGTTGCAGAATGTTATGTCTTAGTCTGGGAAACGAGGGTATTCACAGTCGGGTGGGCTGAGGTGAGGTGACGGGTACGTCGAGTAACACCTTTGACACCTGCATGCATCCAGGCAGCAGCAGCGAACCAAAGTGTCCAGACCTAGAGCTGGCCCTCAACAAGGCCTAGGGGAGTGACTCAGATGCATCTTTTATTGATTTCTTCTCCAGTTTAAAGATGGTTCTTAGAGTGTCACAGATTATTTTTTATCTGCCTAAATCTCTGGCTCTCTCCTGACTGGTCTTGCCAAAGTTTGCGGTGTGTTCTGTTAGCACACGTGCACACACACCAGCATTGCAAGTTTTTCTTGGGTTATTATCATAGAGGCCAGTCTGAAACATTGGTAGACTCTGGTAATTTAGAAGGGGAAAAAGCCCTGCAGAACTGGGTGGACAAATCAAAAGTCCAGAAACTTAGCAAAACCCACAGTAAGAATGTCTTCCCTCCTGAGCAGCAGTCCGAGGAGAAGGACCTAGGACTCTCTTCTTCCTAATAAAGCCGCAGGCAGACTCTCAGCTCTGCAGTCCTGGGGACCTGGTGACAGTAACACTGAGATGAGAAGGAGAGAGTCCAAAAAGGGAATGAAATCTTGAGTATTAAAAAGCTGTTTTTGTAAGTTTGAGGCCAAGATTTGGCCAAAATAACTCTTGCCCTTGGTTTTAAATTCCAAACAGTGGCAAGGCCTTGAAGTGAGTTCCCTCTTCTTCCTGGGTCTTGTTTGCAGGGTTTTCTCTTTTCTGTATGGAATAACCAAGTTGGGGAAGGGTAGGCTTCACTCTGGAATGAATGACTAGACTTGTGATTTTTTAAATTTTTATTTTAATAAATCTACTCAGTCTGTACAACCATGTCTAACGTAGCTGACATCTAAAAAGACCAAGGGGATCAGTGGATGTGTGGAAGGTTTTGGGGTTTATAACTCATGACCCAGATCCTTCCAAGACACAAATGAAGCTAATCTGTCTTTCTTCCCCCCACTTAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAAAAAACAGGAAGGGAGCTTTCATCCAGTGCTTAGTGCTTTGGCAAAGCAGTGTCTTCAAGGCTCGTCTTGAGCACCAGGATTTATATGTGGTCTTCACTGAACTCTGTCTTCGTGGCCAGCAGGGTTGAAACCTGGCTCTTGAAGGAGGTGCGTTTTTGGTTGTTCGGTTGGTTGGTTTTGCCAGGCGGCCATTGTGGCACCAGGTGCTGCCTCCTGCAGGTTTCTCATCCTCTTCAACAGCCTCGTGCCCTGCACCCCACAAGTGTGGCTTGTGGTTTTTGTCACCAGTCACCCACTGCCTGAGATGATGATCTCCTAAGAATGAGACTCTCAGAGGATTGATTATTTGCATCAGTGAGCCTTCTGTCACTTTCTGGAGTGAAGTCACTTGGAAGTTCTGTTGGATTGAGGAGCTTGGTGTTAGGATTATAAAGGAAATTTGCCTTGGGGCCCAGTGGCACCCAGCATCCTCTGCCCATGGGAAGTTGGTTGAGGGCTGCGCTGTGGAACGGTGCTTCCCAGAGACTCCAAGAGGGTGCTCAGATGCCCTCCTCCCGGCCGCTTTCTGATCTCATCAACCCTTGAAACAGTGGCTCAGCTCCTAATTGCACAACCTCCTCTGACATTGTGCCTTAGAAGAGGCAGATGTTAAAATGGGATCCGAAGACCAAACGGGGTGAGGTTGGGGTTGGTGGGTGCCAACTTAGCTTCTCAAACTCCCTCTGCCCTCTCAGCCCTCATGCCAGGCGTGGGGTAAGGTTTCAGGGGCTCTGGAGAGTTTCCTGGTTTGCCTGGAAAACATCCAAAGCTTTAGAGGAAGCAGGCCCTGGCTATGGCTGCTAAAGGCCCCCATTTCCTTTAAAATCAGTGTTTAGCCAGAGATGGCTGAGACTTTGTTGCAATAATTTTCTACCGATTTTCTTGCTGCCTCAAGTACCCAATTCCACTCCCAGGAAGAAAAATAAATTGAATCAGGAGAAACCAGACCAGCAGAAAGCAAACTCCCCTTGATGCCCTAACCCAGCACATCCAGCTACATCGCTGCCTGATCAGAGCTGCTTTTGTTCGCCCACCAGAAAGGTTGACCAGTCAGTGCTTCCTGCACCCGGGCCCGCTCACTGCCAACCCAGAAATGGAAACACGGCCTCTCATCAGTTTGAGCGCCTCACCCGCCTGGTGGTGAGGATGCAGCTCAGAGTTCGGACGACTCCTGGGCCACTTTGTTTGTAAGCCTCATCTGTGCCTCAAAATAGCATAGCAGCTGCTTATAAAATCCCCAAAATAAAGTTCTGGGTCACCGCTGTGTGAGCACCCTCACAGCCACCAATCTGTTGCGACTCTAAAATCTGTTCATGTCAAGTCGTTCTTTCTCTTCCTGTGGAATAAAATGCTCTGTTGACTTCCAAA EMBV3_42939 GCTCGAGAGCCTGGACCAGCTGGAGCTCAGGAGAACGAGAAGAATTAAATCTGACTGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02291 GCCAAGAAAACAACATGGGTGAACCTGAAAGCCGTTTTTGGCCACCGCTTCTCTCTAGGC Gene GeneID:539973|LOC539973:XR_084147:64_cdna Constitutive 0 NULL GeneID:539973 X PSEUDO LOC539973 NULL similar to Zinc finger, DHHC-type containing 3 EMBV3_14379 TGCCTGTACATGGGATACGGGACTGCATTGACTCTGGACACCATTCAAACACTGTAGACG Gene GeneID:282301|PDGFRA:XM_002688255:168_cdna UTR3_Alt 2 NULL GeneID:282301 6 GENE PDGFRA NULL platelet-derived growth factor receptor, alpha polypeptide EMBV3_23818 GGAGAGAGAGTGAGAGTGCAAACTTGGCATAATGCTTTTTATTTCTGGGTGGGGAGGCGG Gene GeneID:506458|CBX8:NM_001077862:356_cdna Constitutive 0 NULL GeneID:506458 19 GENE CBX8 NULL chromobox homolog 8 (Pc class homolog, Drosophila) EMBV3_32994 TGTCAGCCAGACCCACAGCTTGCAAAGATGAAGAGGAGGGGATGTTTGTCTCAGGTGCTT Gene GeneID:505592|CCDC97:NM_001082603:547_cdna Constitutive 0 NULL GeneID:505592 18 GENE CCDC97 MGC143003 coiled-coil domain containing 97 EMBV3_40608 CCAAAAATACTGAGCACCTACATTGAGTTGGAGACGTAGCAATGCATGAAACCCCTTCTC Gene BVV0102_231613 - 1 EMBV3_11175 GK000018.2:52564227-52582658 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086790 TCONS_00086793 TCONS_00086791 TCONS_00086792 TCONS_00086794 1 XLOC_052251 Coding TCONS_00086791 XLOC_052251 Coding Coding ZFP112 18:52580418-52618003 j TSS64529 5448 1 TCONS_00086791_6 903 0.191813509544787 6 0.855204342273308 3.02075095849004e-11 2.71022862256535e-11 3.42149671548247e-07 1.8971370337485e-11 1.33834024690524e-11 1.17926446318173e-11 1.83898866705051e-11 3.38230585069329e-05 2.58652108953274e-11 4.05116394192407e-09 8.383921157256e-06 4.93148637424676e-12 2.5178313963445e-07 1.29585735288943e-11 5.32609235409236e-06 0.000780358272138868 3.08059531668382e-11 3.92131526684002e-08 1.93503236318185e-11 2.18118661413969e-11 1.08844896177391e-11 0.000298438062963236 0.00032552195691778 0.00047873563706072 1.65451086187474e-11 2.17803655196918e-10 1.86062252430436e-11 1.25604404555325e-05 2.70341107924524e-05 1.56774067744878e-09 XM_002695086.3 ZFP112 PREDICTED: Bos taurus zinc finger protein 112 homolog (mouse) (ZFP112), transcript variant X1, mRNA. 0.0 5182 100.00 0.527165932452276 NM_001083335.1 ZFP112 Homo sapiens zinc finger protein 112 homolog (mouse) (ZFP112), 0.0 3301 83.86 0.556534508076358 TCONS_00086791_6 sp|Q9UJU3|ZN112_HUMAN ZN112_HUMAN Zinc finger protein 112; 0.0 1463 79.47 0.996677740863787 8 coding 1 1 1 1 -0.00780137576771123 0.943930797572485 0.00819975509174573 0.929155374171626 ATGGGGGAGATACCCTACACCTGTGATGTGTGTGGGAAGGGGTTCGGATTTGGGTTGCTCCTGTGTTTCCATCAGAGGGTCCACAGTGGGAAAAGGCCGTATAAGTGCACCAAGTGTGGGAAGGACTTTGATCAGAGCTCCAACCTTCTTGTCCACACAGGGGAGAAACCCTACAAATGCAGCGAGTACAGCAAATGCGTCAGTTCCAGCTCCATTCTCCAAGTTCACCAGAAGCTGCACATGGGGAAGAAGCCTTACGAGTGTGACGAGGGCGGTGGTTGTGTCCATGCTCCTGTCGGGAATTCTGGGAAGCGTAGTCCGGGAGGTCTCTGTAGGCAGAGTCACTTCCGGCTCAGGTACGCGAGGCCGCGGCCTTCGTTCTTCTCGGAAAGGTCTCTGCCTTTCCCCAGGAAAAGGACAAGAAGATGATGAAGTTCCAGGAGCCAGTGTCCTTCAAGGACGTGGCTGTGGTCTTCACCGAGGAGGAGCTGGGGCTGCTGGACTCGGCTCAGAGGAGGCTGTACCAGGAAGTGATGCTGGAGAACTTCCAGAACCTGCTCTCAGTGGGAAATCAGCCCTTCAAACCAGAGCTTATATTCCAGCTGGAGAGAGAAGAGCGTTTGATGATGGAGTCCCAGAGAGGAACCAAGAGTCCACATAATATGGAAAGTATTCAAGAAGTGGGATTAAGCTGCTTTTCCCCCAAAGACCTTTCCACCTGGCAGTCCTGGCAACGAGGTGCAGGCAGGTTAACTGGGTGTCAAGATTCCATGAGAAACTTCCAAGAGAATATTTCTCAGTTGCAAAAACAAGGTGATTCCCCCTGCCAGGTTTGGGCAGGAATACCAATTCAGATTTCTGAAGATGAGAACTGTGTCTTGACTCACATAGGAGACGGTTCCAATGACATAAAAAATCAAGAATTTCCCTCTTGGCGAGCCCACCATTCTTGGAGGAAAATGTACCTTACAGAGTCACGTAATTATCAATGTCGATGTCAGCAAGTTTCCAAGGAAAATGATTTCTGTAAATCTGACAGCATCAGTTGGATCTCACATCATGGTGATAATCTGGGTGTACACAGAACAGGAAAAAACTCCAGCTGCCATGACTGTGGAGAAGATGTCATGAAGGTTTCATTGCTTAATCATATTCAAACAGGGCAAAAGCCCTATCCTGGTAATGAGTTCAGAAAAGCCTTCAGCGATGACTCCAGCTCTGAAGTTCATCAGCAATTAGATTTAGAAGGAAAGCCCTGTACATACAGTGCATGTGAAAAGGACTGTAGTTACAGGTCAGTTCTTCATATTCATCAGAGTGTTTGTAGAGGAGATCATTGTATTTTTGAGAATTCACATCTGCAATCGCATCAGAAAGGACACGCAAAAGAGAAGCCATTTAAATGTGAATACAGTGAGAGCATCAATCAGTGCTCCTCTCATAACACATATCAACTTATACCCAGAGGAGAGACGTCTGATAGATACAGCGTGTATGAGAAAGGCTTCAGTCATAGCTTAGACCTTAGTAGTATTGTTAGGGTCTACATCGAGGAGGAATCCCATGAATCTGAGGAGAATGGGAATGCCTTTAATGAGAATTCTTGTCTTCAAGCCCATCAGAAAATCCACACTGAAGAGAAACGATACACAGACATGGAGTGTGAGAAAGGTTTCATTTGTAACTCAGATCTGAACATTCAGCACAGAGTTCACATGGAAGAGGTTCCCTATAATTCTGAGGCATGTGCTAATGGCTTCAGTCTGGCCTCACATTTTCAAAACCTTCAGATAGTCCACACTAGGGAACAACCCTATAAACGTTACACATGTGGTAACAGCTTCAGCCAAAGTTCGTATCTTCAAGCCCATCAGAAAATTCACATCGGAGAGAAACCTTACAAGGTGTGTGGGAATGGCTTCAACTGGAATTCAAAACTTAAAGATCATCAGAGAGTCCACACTGGCGAGAAGCCGTACAAATGCAGTGCATGTGGTAAAGGCTTCAGTCATAGATCTGTTCTTAATGTTCATCAGAGAGTCCACACAGGAGAGAAGCCTTATAAGTGTGAGGAGTGTGATAAGGGTTTCAGTCGGAGTTCATACCTTCAAGCCCATCAGAGAGTCCACACAGGAGAAAAACCATACAAATGTGAGGCATGTGGGAAGGGCTTCAGTCGTAATTCATACCTTCAAGGGCATCAGAGAGTCCACACTGGCGAGAAACCATACAAGTGCGAGGAGTGTGGGAAGGGCTTCAGTCGGAGTTCACACCTTCAAGGCCACCAAAGGGTTCACACGGGAGAAAAACCATTCAAGTGTGAGGAGTGTGGGAAGGGCTTCAGTTGGAGCTTTAATCTTCAAATTCATCAGAGGGTTCACACAGGAGAGAAACCCTATAAATGTGGAGAATGTGAGAAGGGCTTCAGCAAGGCCTCAACTCTTTTGGCCCATCAGAGAGTCCACACAGGAGAGAAACCCTACCAGTGTGATGAGTGTGGTAAGAGCTTCAGTCAGAGGTCTTACCTTCAGAGCCATCAGAGTGTCCACACTGGAGAGAGACCATACATCTGTGAGGTTTGTGGGAAGGGTTTCAGTCAGAGAGCATATCTTCAAGGCCACCAGAGAGTCCACACCAGAGTGAAGCCGTATAAATGTGAGATGTGTGGGAAGGGCTTTAGTCAGAGCTCACGCCTTGAAGCACATCAGAGGGTCCACACCGGAGGGAAACCCTACAAATGTGCAGTGTGCACGAAGGGTTTCAGTGAGAGTTCCCGCCTCCAAGCCCATCAGAGGGTCCACACAGAAGGGAGGCCCTATAAATGTGAACAGTGCGGCAAGGGCTTCAGTGGGTTTTCAAGTCTTCAAGCCCATCACAGAGTCCACACTGGGGAAAAACCATACAAATGTGAAGTGTGTGGAAAGGGCTTCAGTCAGAGATCAAACCTCCAGGCTCATCAGAGAGTCCACACAGGAGAGAAACCCTACAAATGTGACGCGTGCGGTAAGGGTTTCCGTTGGAGTTCAGGTCTTCTAATTCATCAAAGAGTCCACAGTGGTGATAAATTCTATACAAGTGAAGAGTATAGTAAGGGTTATCCTTCATCAGAGAATCCGTACAGAAGCGAAGTTCTGTAATGTGGTGTTCCATTTTGTTCTGAAGTCTTCAAACAAGAGCTGAAATTTTCCACTCACTTGAGTTCTCATAGTAGAAAAAGAATTTCTTTCATGAAAATGTAATGTTTCTGCTCAACATCAACATTTACAATAGTCCATACAGCAGAGACTTACCTAATGAGAAGCGTTCCATATGGGATTTCATGAGAACTTGAATATCAGTCACTGCAAGTGACTTTCATCAGCTCTTGTACTAGAGCTTAGAAAAGACATGAGTATGGCTAGCCACCTGCTGCTGCTGCTACGTCGCTTTAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTTCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCCGACTCTAGCGACCCCATGGACTGCAGCCCACCAGGCCCCTCTGCCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGTGTGCCATTGCCTTCTCCGAATTTATACAATGATGCGCATACCTAAATTTACGTCCACTGGAACGTAAGCTTATTAAGAGAAGGGGTTTCATGCATTGCTACGTCTCCAACTCAATGTAGGTGCTCAGTATTTTTGGTAAATGACTAAAAGTATGTAAAGTTGTCATGTTTGAAATGCTGATTTTCCCCAAAAAATAATTTAAAATATATTTGGAGGAGGGATCCTGCAAGTCTTAATGTAAGCAAATAAGTAAGCATAAACATTATTTGAAATGTAGAACATAGGCAGTATCGCAGTCTTAAATGACATGAATTTGGTTTAACCCCCCCAGGATTGGTCCTCCCCATTTGTCCCTCATCAGCAGGGATGGGCTGAATTTCTTAGCATTTGGTCTCTTTCTCTACAGTGTACTATCGGGTTAAGTTTAGCTCTGTGTGTGTGTGTATACCTATGTGCACTTTAAAAGGACAATACAAACTGATAAAACAGTGTTTCTGGTTAACTTGGCAAAAATGAAATGCTGCATTTTACATAACTGAATTTTTACTCCTGCCCTGTGTGTTAAGACAGTTTTACTATAATATTTGGAAAGTGTCAGAAATGGTTACTAACAGTAACAGTAACTTTCTTAATAAATGTTCAAATTACAATATTTGTTTTTCTAGCTTCCATATTTCCATTAAAATCCTTTTGATCTGACTGGTTTCTATATAGCCTTTGTCCAATTCAGACCTCTTTAGCAGGATCTGTGACAAGTTTGGAGGACTTTAATTTTGTCAAATTTTATATCACCATACTTTTCCCACTCATGCAAAGAAAGGAAAAAAAGTTGAACTATAGTTGATTTACAGTATTGTGTTAATTGCTACTGTACAGCAAAGCAAATCAATTAAAAATTTCTTTTAAAATATTCTTTTCCATTGTGGTTTATCATAGGATATTGAATATAGCTCTCTGTGCTATCCAGTAGGACCTTGCTGCTTATCCATTGTATATATAAAAGCTTATGTCTGCTAAGCCAGCCTCCTACTCCATCCCTCCCCCAACCCCTGGGCAACCACCGGTCTGTTCTCTGTGTCCGTGATTCTCTTTTTGTTTTGTAGATGTGTGCATTTGTGTCATATTTTAGATTCCACGTGTAAGTGATACCATATGGTATTCGTCTTTCTCTTTCTGACATTTCATTTAGTGTAAGAATCTCTGGTTGCATCCATGTTGTTGCAAATGGCATGATTTCATTCTTTTCTATGGCTGAGTAATATTCCACTATATATATGTGCTGCATCTTCTTTATCTATTCATCTGTCAATGGGCATTTAGGTTGCTTTCCATTTCTTGGTTGTTGTGAATACTGCTGCTCTGAACATAGGAGTGCATGTATCTCTTTGAATTATAGTTTGGTCCAGATGTATGACCAGGAGTGGGATTGGTGGATCATATGATAATTTTATTTTTAGTAAGGAAAGGAGAAATATTGAATTTTTCTAGGCATTTTTTCAAATGTATTGATTATTAGGATAAGATTTCCTTTTGCTTGCTAATCTGTATCTTCAAGAACAATGCATTTTATTGGAGGAAGTGAAAAATACAAATTTGTCAGAGTCGTACAATATGTATCAAGATGTAAAGTGTACATTTTTGTTGTTCAGTCGCTAAGTCATGTCCAACTCTCTGCGACCCCATAGACTGCAGCACGCCAGGCTCCTCTTTCCTCCGCTATCTTCCAGAGTTTGTTCAAATTCATGTCCATTGAGTTGGTGATGCTATCTATCTCATCCTCTGCTGTCC EMBV3_04247 CACCTGAACTAAGTACTTTCATAGGCAACACCATCCCCTTTACCTGCTACAACTACAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24395 CAAGGATCGCGGGGCTTCGTGCACTGGCCGACCTCACAGCTGCCAGCAACATCATCTTCT Variant GeneID:100125760|DPP7:NM_001105043:4_cdna 490^765 1 EMBV3_23717 GeneID:100125760 Un GENE DPP7 DPPII MGC151556 dipeptidyl-peptidase 7 EMBV3_37461 GCTCTGTGGTCTACTTGGAAATCCGTATAGATAACATTTCAAGGGAGGTAACCCTGTTGG Gene GeneID:497013|NCL:XM_002685596:208_cdna Constitutive 0 NULL GeneID:497013 2 GENE NCL NULL nucleolin EMBV3_07145 TGAACATTAGGCTACACGCATGGTCACCCTCTCAATGGACTCTGAACTTTGTGCCCGGTG Gene BVV0102_260892 + 0 NULL GK000006.2:69187081-69282678 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131867 TCONS_00093074 TCONS_00234998 TCONS_00052625 TCONS_00200313 TCONS_00052628 TCONS_00235004 TCONS_00123063 TCONS_00033549 TCONS_00052627 TCONS_00052626 TCONS_00234999 TCONS_00235000 7 XLOC_080572 XLOC_057071 XLOC_144146 XLOC_031526 XLOC_121965 XLOC_074617 XLOC_019782 Coding TCONS_00234998 XLOC_144146 NonCoding NonCoding - 9:32310222-32320356 - TSS176287 2792 3 TCONS_00234998_3 72 0.679441260744986 3 0.724760682917201 0.00983733749072953 0.0101371979365872 0.0127103245956048 0.00834543299188456 0.00568979495486662 0.00131430353931889 0.00409189422517492 0.00849438165497996 0.00740773868787225 0.00212169905065288 0.000308569706887329 0.000614950409318723 0.0012540190690429 0.00234053253081652 0.00230872456243719 5.95866603644809e-07 3.75442796679508e-07 1.0951381044767e-06 0.00853683431381165 0.0134597738976686 0.00317772525550934 3.65147451458339e-07 1.54985121836703e-07 0 0.00975026396909662 0.00648610014919699 0.00750077646357248 0.000196085124371147 0.000121905713748361 3.0037792632131e-07 XR_240300.1 LOC101902865 PREDICTED: Bos taurus uncharacterized LOC101902865 (LOC101902865), 0.0 825 93.78 0.193767908309456 NM_020066.4 FMN2 Homo sapiens formin 2 (FMN2), mRNA. 2e-52 212 80.60 0.080945558739255 0 noncoding 0 0 0 0 -0.938087904037599 0.00257931357272917 -0.156044335757595 0.0270594298825993 GTCAAAGACAGGAAGGCGGGCGAGAGCCAGAGTGGTGGGGTGTGAGGAAGACAAGACTGGCCATTGTAGGCAAGTAGATGGGAGGGCCGGAGCCAGGAGTGCAGGCAGTTTCTGGAAGCTGGGAAAGGCAAGGAAACAGATTCTTCCCAAGGAGCCTCCAGAAGGGACTCATCCCTGCCCTGGTTTGAGCCCACTGAGATGCATTTCAGGTTTCTGACCTCCAGAACTGAGGGTAACGAATGCGTGGTGTTTTAAGCCTCTGATTTGTGGTAATGTGTTACAGCAACCATAGTAAACTAATACTGGGAAAAAGCTGAAAACCAGTATTCTCTAGAAGCTGTGAACTGGAGATTCCAAGATCATTTTCTCTGAGAGAAGCCAGCTGCCATGTTGTAAGGATGCTCAAGCAGTTTCTCCCCACGGCAACAGCCAACATCAGTTTGCTAGCCATGTGTGTGAGCCACCTTGGAAGCAGACCTTCTAGTCCCAGTCGAGCCTTTAGAAGACTACAGCTCAGCTACTTTCTTTCTTTTCTTTTTTCTTTTATTATGCATTTTATTTTCATATAAATTCACATCCTAGAAAAATTAAAATAGAAACACTAAATACAGCATTGCACAGAGCAATCTCTGTTAAATGCCCCATTGTATCATTGAAGTTCATACCCACGTGGAGGGACTGAAGGAGACAGGAAGATGGCAGAACAGCAACCCGAGAGCCACCACTGTGTCTGTGCACATCAGCTACAGACTGAAAGGTTATTTTCTTCATAGACAATCATATCACCTGCAAATCATATTGAAGGAGGAAACAGACAGAGTTGGACTCCATCTTAGGCCAGGCTGCGAACATTAGGCTACACGCATGGTCACCCTCCCAATGGACTCTGAACTTTGTGCCCGGTGTCTATAGAAGTGGCATACCAATGGAAAACCAGACCCCCCGATAAAAGAGCCTCGGGACTTGTACTTGGACTCTCCATTGCCTAAAAGAATACGCTAATTATCTCTGCAACAGAACAAAGTTGTAAATTCCATTATATTTATCGGGATATGACCACAGGCCTATTGATAAACGTTCACTGTTTATCTAGTCTTGTGACACATGAATCATGGGTTAACTTTGATCGTATCTCTCTTTTACCTTGTCCAGACTAGTTTCAAGAAATTTGGGGAGGTGGGTTTGGGCAAGTACACTTAGGGTATATAAGGTTTTCACAAAAACGGTCGGGGTCCTTGGCTAAGAGGAGACTCTGCCTTGGGCCCACCGGTGTTATAAACTGCACTCCATCTGCATGGTCCTTCTGAGTGAGTTTGTTTCCCGGAATGTGTGGCTACAACAATATTCATTTTATTTCCGTTTTAATCCTTAAACCTTCTGTTTATCCTGTCTCATCACACAGTGCTAAACAGAAGTGGTAATAATGGTTTTCCTTGTCTTGTTTCTCATCTTGAAGGCAATGCTTTCCACATTTTAACATTAACTGTGGCATCTGCTGTAGGCTTTTTGTACATGCCTGTAACAGACTCTGTGATGTACCTCTGAGGTCCCTCTTTTCTGAGCTGAAGTAATTCTTCCAGCAGCTGGCGGTACTACTGGCAAACAGCCCTGGACCGTCAACCTTCTTCAGCTAAAGAGAGTAAACTGCCCACATCACATCCACTTCCTGGGGTAGCTCACCTTGGGTGGCTGGTTGACACAAGGTATAAAGGCCCACCTATCACCCCAAGTCAAATCGACTCCAAAGGGCTACCCTCATTCCAGCACTCTCTTTAGGGTTGGGTGAAGCTTTCCCTGAGTCTACACTGCAGCCTGACTTCTCCCTTCTCTGCCCAGTCTTACTTCCTACTTTCTCTTCCAAAGATCCTAACCTTGGGAACACTCCCTAATCAGTTTCCTCCATGTTAACCTCTATCTCAGACACTTCTTCCTGAGAAACTCAAGCTATGACAGTGACTATTTTCAGTTTTCCAATTTTTCTAATCTAAGTGAATATCAAGTTTTTCTAATGTTTCTTCTGCATCAATTGGAGTAATCATCTGATTTTTCTCTATTGTTTATGAGGCCGTAGACAATTTACAAGTAAACTGATAATTACATTTATGGGATGAAGACATTTTGATCGTAATGTACTATCTTTGTGCATTTTCAGATTCAATTTGCTAATATAAATTTTGTTCAGAATTTGTATTTGTGGTCATGATTGAGATTGGCTTATTTCAGGGTTTTCTGGGTTTCCATTTTGCTTGTAATCTTTTTGTCTAGATTTGACATCAAGATAATCTTGGCTTCATAAAATAAGTTGGGGAGTATTTCCCTCCATTTCTGGTCTCTGAAAGGGTTGGGGAAGACTGGAATTATCTGAAGATCAAAATTGCTCTGTGCAAAGGTTTTTAACTATTTCGTTTCTTTAATGGTTATAAGACTATTCAGGTTCTCTAATTCTTCTTGAAATATATTTTACAATTTGTATTTCTATAAGAAATATTTTCATCCAGTTTGTAAAATAATTTACTTTTCTCATGACTTTGACATTTTTAGTCATAGCATTTTTTTTGTTCATCCCATTTATTTTGAGACTACTCTCCCTTTTTCCCTTAATTTTCACAGAAGTTTGTTTTTGTATTCTTTTTCAAAAAATCAGTTTAGAGACTATGTCGATTTCCCTGTTGTATGTTTGTTTATTTTTCTATTTCATCATTTTCTTCTAAAATTGCATTACTTTTTTCTTTCACTTTATTCTCTTGTTCTTTTTTTAAACTTCCTAAGATAGATATTTAACTTACTAATTT TCONS_00235005 s 5' 40379 TCONS_00234991 TCONS_00234992 TCONS_00234993 TCONS_00234994 TCONS_00234995 TCONS_00234997 s 3' 45100 EMBV3_14955 AGGACCTGAAGCCTATGCACCTGAAATTTACCAAGAAACACCTGGGCCTGAAGACCTCTC Gene GeneID:767995|HEMGN:NM_001077055:47_cdna Constitutive 0 NULL GeneID:767995 8 GENE HEMGN MGC134079 hemogen EMBV3_02471 CATCTGTAAGCAACAGTTTATTTAGATGTTTCTTGGGGCAGAAGTATTCTGCAATGAAGA Gene GeneID:618565|KLRD1:XM_002687831:147_cdna Constitutive 0 NULL GeneID:618565 5 GENE KLRD1 NULL killer cell lectin-like receptor subfamily D, member 1 EMBV3_08266 CATGATTGTCGCCTACTGGTCCTTCACATCTCAGCTCGGTGGTCTTCTGTTGGAGGGAAA Gene BVV0102_209186 + 0 NULL GK000018.2:63440392-63443724 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084798 1 XLOC_051713 NonCoding TCONS_00084798 XLOC_051713 NonCoding NonCoding - 18:63441175-63442788 - TSS63475 1613 1 TCONS_00084798_2 91 0.419714817110973 1 0 2.1963784724246e-53 0 3.41457797584998e-174 2.57634194226466e-13 1.4926628493281e-05 0 1.0603769748397e-05 0 6.67603096117905e-20 2.08615371729569e-26 1.45731794953568e-60 0 4.98289396283726e-63 2.18148027174094e-23 1.15983749051222e-17 2.05555080102574e-24 0 2.90654915010534e-28 0.000164808901396013 6.66100781895803e-50 0 0 7.1133917223888e-23 4.36328088808914e-25 4.29539595059814e-06 8.20648686807784e-22 3.48921577016222e-05 0 0 0 XR_226260.1 LOC101905303 PREDICTED: Bos taurus uncharacterized LOC101905303 (LOC101905303), 0.0 1112 99.52 0.384996900185989 0 noncoding 0 0 0 0 -0.0779139974288864 0.638317292724669 -0.0288919085384689 0.601572401654754 TGCCTTGTGTCTTGGCCAGGCGGACCGGTCTCTCAGTTGCACGGCCCATCTTTGAAACTCAGAGGAAGGAAGAAAAGGAAGCAGAAGATAATGCCCCAAGTCACTGACATCACGCATAGCTGCACTGGTTGGGAAGTGGCATGGAGTTTTTGGCCTTCCTCTGAATGGTGACGTGATTGTGGGACAGTAAGTCTCCTCCGCACCTCCGTTCGCTTGTTGTCGTGAGGACGCCGCAGAAGGTACAGATGGGATTCCGTCCCCCGCCCCCCCGCGCACCTCCCCCCACCATGATTGTCGCCTACTGGTCCTTCACATCTCAGCTCGGTGGTCTTCTGTTGGAGGGAAAACTTCCCTGACCTCCCGTTCTGAGCGGTCCCATGAGCCCTGTTCATTAGAACCTACTTTTGCGAGTATGCCATCCTTTTCCTAATGATTTGAGTCTTCTCTCTCAGTAGACCATTTGCAGAATGAATACATGGATGAATACGGGGAATGACTTGTGGTTAAGACTTGCTAGGTACCGGTGCTTCTGCAAACCAGGAGGCATTTGCCCTGGGCCACACAGTGGAGATGGGAAGTCAGGTCTGCCCAGCTCCTCTAGGAGGAGGAAACTAAGGAACTCCAGGGGAGATGCAGGTGAGAACACTGGAATCACCTTTGGCAAGGCAGGCACTGCTTTCAGGATCACCCAGGCCTGGGGAGTGAAGCCTAGGGATCTCTATTTCTACAAACTTCTTGGTTGATCACTAGAGTTGAAGAGTTATTGATCCATAACAGTCTTGTTATTCAACATGTGGTCCCTGGATAGAGTAATATTTTTAAGATGGCTTAAAAATCCCTTGGGGGTTTGTCAAATGCAAATTCTGATTCAGGAGGTCCCAGGCCCTGCTTTCTAAGATTCCCAGGTGATGGTGATGGCCCACCGTTCACACTTTGAGTAGCAAGGGTCTAGGGCAATGGTTCTCAAATTTGGCTGCACATTAGAAGCACCTGGGGGCTTAAAACAATTCAGATACTCAGGCCTTGCCCTAGACCGATTAAATCAAGAGTTTCTTGGGATGGGAACCAGACATGGTAATTGACTCTGAAGATGATTCGAACATGCTGCTAATCTGGTAGAGAACTTTCTAGAGTAGTAGTTTTCAAAATGTTAGTCCCTGCATTGGCAGCAATAAACACCACCTGGGAAGTTGTTAAAAAGGCATGTGTTTGAGCCCCACCATAGACTGTGTGCTTCCCTGGCGGCTCAGCAGGAAAGAATCATCTGTCAGTGCAGGAGACGCAGGTTCGATCCCTGAGGGGGGAAGATCCCCTGGTGAAGGTAATGGTCACCCACTCCAGTATTCTGGGATATCCCACAGATAAAGGAGCCTAGCGGGCTACAGCCCATGGGGTCACAAAGAGTCGGACATGACTGAGAGACTAAAAACACACACATACACATAGACCAGCTGAATCAAACTCCTTCCAGGTGATCCTGAAGCATACTAAACCTGGAAAAACTGTTCTAAGAGGATGCGGGACTGTCAGGCCAGGTGACTGGGATTCCTTGAGACTCCATCTCCGTGCCCCTGTCCACTGGTTCAACGGTTCAGTGTGGCCGGGGCGGGGAC TCONS_00087601 r 5' 0 TCONS_00087601 r 5' 0 EMBV3_09212 TGGCTGGTTGGTTTTAGTACTGTAAACTGGTTCTGAGCAAACACGGAAATTTAGCAAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20074 ACTCATATCTCGAGTGACAGCTCCTTCCACCTGCAGAAATCCTCCGTGCAAACATCAGAC Gene GeneID:100335290|LOC100335290:XM_002690633:20_cdna Constitutive 0 NULL GeneID:100335290 10 GENE LOC100335290 NULL hCG2039694-like EMBV3_30375 GGGGTACGTTTGGCAGTTCACCCCATTAGGGGGTAAATAATTTATGACCATTCATCTGTT Gene GeneID:613800|ATP2B4:XM_002697120:49_cdna Constitutive 2 NULL GeneID:613800 22 GENE ATP2B4 ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 EMBV3_00117 AGGCCTTAGCGGGGCCTACCAACCAGCTACCTGAAATGGACAAACCAATCTACTTAATAC Gene GeneID:538953|OTX2:XM_002690954:312_cdna Constitutive 0 NULL GeneID:538953 10 GENE OTX2 NULL orthodenticle homeobox 2 EMBV3_13078 GGTTCATCACATGTTGTTAAGGGAGCAGTGGTCGCCACATATTCTGCCCTGACTCACAAG Gene GeneID:526227|RPS6KA6:XM_002699935:88_cdna Constitutive 1 NULL GeneID:526227 X GENE RPS6KA6 NULL ribosomal protein S6 kinase, 90kDa, polypeptide 6 EMBV3_38318 TACCTCATTGCTCTTTGGCGACTCTTATTGTTGGAAATCTACATTTCTGAAGGAACCCAC Variant GeneID:512871|FAM96A:NM_001035110:49_cdna 320^369 2 EMBV3_03888 GeneID:512871 10 GENE FAM96A MGC127083 family with sequence similarity 96, member A EMBV3_15557 AGACAGGGACCGATATGGAAGGAAGCTCACTGGGGATTTGTGGGGCCTCCTTGGATATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16375 TGAGGAAGGAGAAATAGAGGAGGAGATGGAGAACCCGGAGATGGTGGACCTGCCCGAGAA Gene GeneID:511438|MGC137676:NM_001075514:220_cdna Constitutive 0 NULL GeneID:511438 21 GENE MGC137676 NULL similar to metastasis associated 1 EMBV3_38074 GGCGCCGCTTTATCTGAATCTGTTCACACCACTTGTTTTGCTTGTGTAACGCCACGGCTG Gene BVV0102_108875 + 0 NULL GK000017.2:55438833-55472096 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080870 1 XLOC_049752 NonCoding TCONS_00080870 XLOC_049752 NonCoding NonCoding - 17:55467634-55469427 - TSS60810 1793 2 TCONS_00080870_1 140 1 0 2.27646937473529e-05 0 0 0 0 0 6.5049763419356e-05 0 0 0.000348802814350343 3.57485551908479e-05 0.00112675118942962 1.92032405232737e-05 7.87059428440336e-06 0 0.00341744771316544 0.000212968659831426 0.00130142318490437 0 0 0 0.000755311209672998 0.00060887345218331 0.000411401927790232 0 2.35765764636036e-05 0 8.03556669753286e-05 0.000262630830167205 1.00595334284644e-05 NM_133917.3 Mlxip Mus musculus MLX interacting protein (Mlxip), transcript variant 2, 2e-25 122 73.11 0.112102621305075 0 noncoding 0 0 0 0 -0.0590306740088131 0.716269739850356 0.0104006338693008 0.852434260498594 GCAGAAATCATCAAAGTTCTCAGCACAACAAAGGGACATCTCTGCTGGTCAACTTTCCAGCATCTTCCGTGTATGGTATTGGGTCGACAGTCAACAGGGAGGCCCCTGCCCCTTGGGGTGTGATGATGACGTAGATCCCCGCTGGGTGCTGGCCTGGGGCTGGCCATGCTGGTGGCAATCTGCGCTTTCTGGGAGCTGGACATTCGTGATTTCATGTGACCCTGACGACCACCCTATGAAGACTCCAGGGTGGCTGCTGTTCGCCGAAGCGCCATGTGAGCAAACGGGCACTTTGTTCAAGCACCTCTGGGCTCTGTCCACCTGGGAAAGCCAGCACGAGCGAGCCAGGGGCGGGCACCCCTCTGCCCCCATCTCATTTTATCACCTCCTCCACTGCTCCAACCGGGTTAGCAAAGACCACACGTCACAGGCTTTTCCAAAAATACGGCTTTTTATTGTCTTGGATGCAAATATAGTTTTGGAGCTGCATTGTAGTGTTGGATACAGCTGGTGGAACCGTGCTTCTCGACAGCAGAGCATCAACGACCGAGCTCAGCGTGGCGCAGGCCTGAGGGAGGCTGCGATGAACAACACTCTTCTTGGGTTTTGCTTTTTCTGCCCACGAGGGGTGACTTGTCTCCTGGGTGGGGAGCTCTGACACAGTCACCGGAGAGCACAACAGGGGGAAAAAAAAAATGGACCATTTACACCGTGAGATGAAACCCGAGAAAGGAAAAGAAGGTGCTGTTTCAGCCGTGGCGTTACACAAGCAAAACAAGTGGTGTGAACAGATTCAGATAAAGCGGCGCCGGGTGCCGCGGCCCGCCTCCCTCGTGAGAAACAGCCTGGGCTTCGGGGCTCCCGGGTGGAGCCCTTCCTACTTGTAGCTTCCGGATGTCGACTCAATGGAACACCATCAGACTTCAGTTTCTCCCGACCCTTTCCCCCACCTCGGCCCTTGAGGGAGGCCCATCTCTATTTTAGAAACCCAGGAGAGAATTCTTCAAAAGAGCGATGCCCAGGGTTGATTCTGGAACCAAAAGTTTGACTGAGGGATGGAGGTGAATTTTGCTACATAATCGTAAAGAAATTTCACAAAAATAGAATTCCATTGAGTAAACACACACACACAGGCTTGTGCAAGCACACATGTGTAGACACACACACAAAGCCAACAATCAACAGGAAAAGTTCCCTTTTCTTTCTCAAAGGCTGACTTCTCATAAGCCTCAACAGAAAACAGCAAACCCCCTGCCGAGTGGTGAGTAGGGAAGGCCAAGTCCCTTAGAAGGAAAAGAAAATCGGGCAGGTGATCTGTGTGGAGGCACCTGGGGGGTTGTAAGGCTTCTCTCTGTTCCTGGAGCCCCTCCGATACCCAAACCCGTCTGCTAGGTGGGTTAAGGCCATGGCAACCACTGACACGTATGACGTATCTAAGGCTGAAGCTCCTCCACCCTTGCTCTCCTGCCTCATGTTCAGGCGAGGTGAAAATCCTCTTTTAAGATATGAGGCGTTGGAGCACAGAGCCAAACACCACGGCCCACTGCTGCTCCCTCGCCCACATCGGGGCGCCTCGGCCCCCTTTCTGGGCAGGCTCACAACTTGGGAGGCACTTTGCAGAGCTGCTCCGGTGGGCGCTGTTCTAAGCCCGCCTACCAGACGAGATAAAAGAACCCAGGTGGGCAGCTCAGCCAGCGCTGGGCCAGGTCCATGCTGCGCAAGTGTGCAGGAGGCCCCATGCAGACGGCCCCCCGGGAACCCCCACCACCCCGGCTCCACCCCGACAAGCCCTC TCONS_00077420 TCONS_00077421 . 3' 420 TCONS_00077420 TCONS_00077421 . 3' 2212 EMBV3_00031 ACCATATTGTGAGGAAGCCCAAGTAGAAGCCAAGTCACCCTGGGGAAGAGGACCTGAAGT Gene GeneID:614871|GIMAP7:NM_001034771:718_cdna Constitutive 0 NULL GeneID:614871 4 GENE GIMAP7 MGC128896 GTPase, IMAP family member 7 EMBV3_25365 TGTGACAAATCCACACAGACCCCAAGCCCTCCTTGCCAGGCCTTCAACCATTATCTCAGT Gene GeneID:507390|BCL2L11:NM_001075310:38_cdna Constitutive 0 NULL GeneID:507390 11 GENE BCL2L11 MGC134444 BCL2-like 11 (apoptosis facilitator) EMBV3_43484 GACTTTCAGCATGGGATTGGTGTTCCTGAAAACAGTGAACCTAGGCGTGCTTCTGTTGGG Gene GeneID:784975|SLC10A5:XM_002692810:127_cdna Constitutive 0 NULL GeneID:784975 14 GENE SLC10A5 NULL solute carrier family 10 (sodium/bile acid cotransporter family), member 5 EMBV3_20243 CCACACGTAAGCGAGATCTTGTTTTAATTGTAGTCATTTTGGTGCCATCATTTCATGGTA Gene BVV0102_098916 + 0 NULL GK000011.2:49062855-49070189 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05237 CATGTGTTTCCTGCCGACCATCATCAACAGGTGGTATTTTGGTGCCTTAATGAAGAGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26361 CTGGATACCAGTGTCCCAAACTCGCTACTGGCAGATAAGCATGAACCGCATCAGCATGAA Gene GeneID:337906|PAG12:NM_176622:131_cdna Constitutive 0 NULL GeneID:337906 29 GENE PAG12 NULL pregnancy-associated glycoprotein 12 EMBV3_02542 GGTACATCCAGATCAGGCAGAGTGCGTAAAATGACAGAAAAAGCCAGGGTTAGCCATCTC Gene GeneID:534539|BRWD3:XM_002699937:94_cdna Constitutive 0 NULL GeneID:534539 X GENE BRWD3 NULL bromodomain and WD repeat domain containing 3 EMBV3_35051 TCGCTGGAGGAACGGGGAGAGACAACCAGAACTCTTGCTCCTGTTTCCATGTATATGCGT Gene GeneID:281861|IL2RA:NM_174358:7_cdna UTR3_Alt 2 NULL GeneID:281861 13 GENE IL2RA CD25 MGC155054 interleukin 2 receptor, alpha EMBV3_12170 GGTATTTTTATAGGAATGTTTGCACTGCAGCAGGTCTAATGAGGGGGGAAAGGAAGGGCG Gene GeneID:445416|FZD4:XM_002699037:57_cdna Constitutive 0 NULL GeneID:445416 29 GENE FZD4 NULL frizzled homolog 4 (Drosophila) EMBV3_20397 TACAAGTTGGCCCGCTGGACCTGCTGTGCTTTACTGGCCGGATCTGAGTACCTCAAGCTT Gene GeneID:515226|EIF3D:NM_001034484:5_cdna Constitutive 0 NULL GeneID:515226 5 GENE EIF3D EIF3S7 MGC127237 eukaryotic translation initiation factor 3, subunit D EMBV3_22151 ACCAGCCTGTCCAGTAGTGGCGGATATGGGCGAGCATCAGGATTTAAAGGATGACTGTCT Gene GeneID:616024|PCDHA6:XM_002689244:128_cdna Constitutive 0 NULL GeneID:616024 7 GENE PCDHA6 NULL protocadherin alpha 6 EMBV3_34985 AGCCACAGCAGCCAAGAAGAGTTCCAATGCCGTGTGCTTCAAGGATGAAAGGACGAAAGA Gene GeneID:100336658|LOC100336658:XM_002699680:2_cdna Constitutive 0 NULL GeneID:100336658 X GENE LOC100336658 NULL hypothetical protein LOC100336658 EMBV3_16222 AGGCACAGACTGCGAGAACAGCACCAAGTGTGGATCCAAGAGGAGCTGAAGCATATGCAA Gene GeneID:509618|LOC509618:XM_002689242:122_cdna Constitutive 0 NULL GeneID:509618 7 GENE LOC509618 NULL similar to rCG62907 EMBV3_14677 GTAGATTGCTGCCATGAAAGAAAACAGAAGCTGCCAAGGCTGGGCAGGAGTGGCGGGGAA Gene BVT0101_027928 + 0 NULL GK000004.2:116238191-116891030 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25644 TTGGAAGGACCTTTGAGTAGGTCTGGACTCCCGAGTGAGGACAGAGTGGCAGCATGAGGT Gene BVT0102_169692 + 0 NULL GK000004.2:61319129-61354647 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01538 TAGCATCACATTAATAGGGGGGAGTGGGGCTTCCCAGATAGCTCAGTGTAAAGAAGGCAG Gene BVT0102_283546 + 0 NULL GK000009.2:63334396-63346327 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19050 TCTGGTGACGTACTCCAACCTTGACCTACAGACCCAGGAGGCCTATGAGATGGCCGTTAG Gene GeneID:511988|TRUB2:NM_001110073:67_cdna UTR3_Alt 3 NULL GeneID:511988 11 GENE TRUB2 MGC140821 TruB pseudouridine (psi) synthase homolog 2 (E. coli) EMBV3_05951 GCAAACACACTCAGCTTGACACCCTGGCGGACTGATTTTAAGGGGTGTGGCAGAAGGTTC Variant GeneID:505359|BAT2L2:XM_002694019:5_cdna 156^237 1 EMBV3_06928 GeneID:505359 16 GENE BAT2L2 BAT2D1 HLA-B associated transcript 2-like 2 EMBV3_02061 GGGCTTGTGCCTTCACCAATGCACTGACCCACACTATTGCCCTAACCACCCTTAACTTCT Gene GeneID:509525|LOC509525:XM_002695727:389_cdna Constitutive 0 NULL GeneID:509525 19 GENE LOC509525 NULL similar to olfactory receptor EMBV3_35281 ACCCATAACTAGGGTCAAGTCACCATGACAGCCCAGAAGAGAAACGCTGGACATGGTAAG Gene BVT0102_138685 + 0 NULL GK000019.2:33715392-33727235 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099691 1 XLOC_059934 NonCoding TCONS_00099691 XLOC_059934 NonCoding NonCoding - 19:33721490-33722731 - TSS74067 1241 2 TCONS_00099691_2 82 0.533440773569702 1 0 0.000186379483393236 0 7.45688160066859e-06 0.000307809304475831 0.000127308375222817 2.88239845990586e-06 2.819522062598e-05 1.90643944642394e-05 0.000279746323266911 0 0 0 2.08086462892283e-05 9.8552203438325e-05 3.95342191099331e-06 0 0 0 0.000132901990445605 0 0 0 0 0 1.11659537605188e-05 2.83862130651496e-05 4.24918619695801e-05 0 0 0 0 noncoding 0 0 0 0 -0.0197783294594882 0.856574040077733 0.0174682059411734 0.732891334469087 CGAAAGCTTCTGCAAGATAAGTTGGGAAGCTCACACTAAGCGTTTTCCTCCCCCTTGGACTAGGTGCGCCATCCACGGGCGGCACATGCCTGCGCTCCAGGAGGGTCATGAAGGGCGGGTTCGCGCGCTCTCTTGTGGCCATAGGTGGGCAGCGCAGGGGGGCCGGCTGCCTGCCGAATCCGGGGAATTGAATTTTCCGTCTCGTCTAAACTACGTAAACTCGTGGGCAGTTCACAGCACTGTTATATTATCTTTCCTTTGCTAAGAGACCATAGCAGTGACTCCACTTTCCAACATAGCTTGATTAATTTCTGTTTTTCCTCTTCTTCTTGGTCAGTAAAGGTAAAGGCTAACCGCGACCTCCCATCATCCAGCCTTTATCTCATTGGTTGTGTAGACTGGACACCACCCTTGTGCCTGTGAAGACACTGTGTTCAAGTAATTGTCCCCATCGCTCTCTGAAGATAAAGCGCTCCCCTCACCTGCTCACCCGCCTTCCACGTTGGCCTTTCTGCTCTTTCTGTAAGCCTGATCTCTGAGATTTGGTGAGCCGGGTTCTGTAAGGAACCCCCTACATCAGCCCCAACAGAGCTTCTCAATGACGCTAGTGCCCTCTCCCACCAGCCCTTTCTGTATCTCTACGGAGGGGCTCCCCCATCTTCCAAAGAAATGGAGCGGGGACGTTTTCCACCCCTACGTTCTCTGCCTGTTCTGGACTGTCCACTTCTTTGAGCCTTTTAACCGTCTTTTCCACCATTTGCCATGTGATTCTGGCCTCTCTGCTCAGTGTGGAGCCATCATTTCTCCAAGCTTTTCTCACCACCAGTGTGTTAGCACCACTTCCTGACACCCTCAGCAGAGTGTGTAAACCCTTATCACAGGCGTGTGCTCCTTTCCAATGAACTCTCCACACCCAGCTGTATGTTCTACGCTCCATGGTCCAGCATCCTCAGTATCCAGACCGTACTCTCCTGATTCCAGCAGATGTAGGTTGACCAGGGCCCACAGCAGCTGAATAGTCATCTTCATCTCTTACCATGTCCAGCGTTTCTCTTCTGGGCTGTCATGGTGACTTGACCCTAGTTATGGGTCTAGGGATCAGGAGAGGAGGAAAGTAGATTGTGAGGGGACACAGGTTTTATCACAAAATAGAAGCTTCCTCTGCATCATCTTCAAACAAGACCAAGAGGAGTGGGTCACGTTTGCAGGCCCCCAAAATCCACAGGGATTGGTGTTTAAAG TCONS_00093314 TCONS_00093315 . 5' 3378 TCONS_00093314 TCONS_00093315 . 5' 3378 EMBV3_06566 CGTTGGAGCACCTCAATACATAAGGCAAACTCTGACAGGCATAAGAGGGGAAATTGACAG Gene BVT0102_063437 + 0 NULL GK000012.2:28700360-28768137 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035007 TCONS_00035013 TCONS_00035014 1 XLOC_020806 Coding TCONS_00035013 XLOC_020806 Coding Coding ZAR1L 12:28692571-28708818 j TSS25730 4513 4 TCONS_00035013_5 145 0.948371371593175 4 0.7224547580943 0.00408201833907709 0.00632667083944759 0.00260884475402462 0.00226203780268112 0.00285378061744426 0.00187175463783617 0.00216536865533195 0.00283683691530989 0.00585936717075475 0.000477961400202149 0.000280324421216191 0.000427888502702365 0.000922811839832132 0.00464580267728802 0.00409517893538649 4.38525033364197e-05 0 0.000557322748975963 0.00203512386315286 0.00365956450087724 0.00111649903499415 5.83714587169214e-05 0.000156903005977779 3.1592781550722e-43 0.00410014652370664 0.00335727006054721 0.00280360174409692 1.09238743726779e-13 6.37604945890575e-05 0.00020013109097849 XM_005213678.1 ZAR1L PREDICTED: Bos taurus zygote arrest 1-like (ZAR1L), transcript 0.0 1025 100.00 0.125637048526479 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 760 68.63 0.483935298027919 TCONS_00035013_17 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-27 108 41.13 0.796610169491525 1 noncoding CTGACCTTGAGAATAGCTATGAGTGAGTTTTTAGAACCCAAATATGGCTATTTTCACTGTAAAGATTGTAAGACCAGATGGGAGAGTGCTTATGTGTGGTGCATCTCTGGAACTAATAAGGTTTATTTCAAACAACTCTGTTGCAAATGCCAAAAGAGTTTTAACCCTTATCGAGTGGAAGCAATCCAGTGCCAGAACACAGGCAAAAGTCACCTGTAACAAGAAATCAGCACAAACCACTCAATCAATCTTTCCCTCCAAGGACAAAAACCAAATGGAAGAAAGAAACAACCCTAAAGTGTGGGAAAAGACCTCAAGTGGAGCATGTTAGAAAAAAATGATGAAAAGACAGAGAAATACAGCACAAATGAAAGAATAAGGTAGAAACACACAAGACCAAATAAACGAAGATGAAATAAGCAATCTACTTGAAAGAGAATTCAGAATAATGATAGTAAAGATGCTTCAAAGACTTGAAAATACAATAGAGAAAATGCAAGAAACATTTAACACAGTTAATAGAATCACCAAGGACATACAAGAAATAAAGAATAAGCAAACACAGATGAATAGCACAATTACTGAAATTAAGAAATACTCTAGAAGGAATCAATAGCAGAATAACTGAGGCAGAGGAATGGATAAGTGAGCTAGAGGATGGAATGGTGCAAATAACTGCTGAAGAGCAGAACAAAGGAAAAAGAATGAAAAGAATTGAGGATAGCCTCAGAGACCTTTAGAACAATATTAAATGCATCAACATTCAAGTTATAGGGATCCCAGAGGAAGGAAAAACAAAGTCACTGAGAAAATTTTTGAAGAAAATAAGTTGAAAACTTCCCCTACATGGGAAAGGAAACAGTTAATCAAGTCCAAGAAATACAGAGTCCCTTACAGGATAAACACAAGGAGAAATACATCAAGACACATATTCATCAAGCTAACAGAGATTAAGCACAAAAAAAGAATATTAAAAGAAGCAAGGGAAAAGCAACAGGAAACATACAAGGGAAAGCCCATACAGTTAACAGTGAATCTTTCAGCAAAAACTTTACAGGCCAGAAGGGAATGGCAGGATATATTTAAAATACTGAAAGAGAAAACTCTACAACCAAGATTACCATACCTGGCAAAGATCTCAATCAGAATTGATAGAGAAGTCAAAGTTTTACAGACAAGCAGAAGTTAAGAGAATTTAGCACCACCAAACCAGCCTTGCAACAAATACTAAAGGGACTTATATAGCCAGTAAACACAAGAGAAAGGAAAGACCTACAAATATAAACCCAAAACAATCAAGAAAATACCAATAGAAACGTGTGTCAATAATTACCTTAAATGTAAACAAATTAAATGCACCAACCAAAAGATAAAGGATGACTGAACGAATTCAAAAGCAAGACCCATATATATGCTGCCTACAAGAGACCCACTTCAGACCTAGAGACACATACAGACTAGAAGGAAAAGGATGGAAAAAGATATTCCTTGCAAATGGAAACTAAAAGAAAGCCAGAGTGGCAATCCTTATTTCAGACAAAATAGAGTTTAAAGAATATTATAAGAGACCAGGAGGGACACTACATAATGATCAAGGGGTCAATCCAAGAAAAAGACGTAACAGTTGTAAATATTTATGCACCCAACGTTGGAGCACCTCAATACATAAGGCAAACACTGACAGGCATAAGAGGGGAAATTGACAGAAACACAATAATAGTAAGGGTCTTTAACACCCCATTTATACCAGTGACAGATCATCAAAACAGAGAATCAATAAGGAAACACAAACCTAAAATGAAACATTAGATCAAATGGATCTAATTGATATCTCAGGACTTTCCATCCAAATGCAGAAAATACATTTTTTTCTAAAGTGCACATGAAACACTTTTCAGGATAGACCACATCTTGGGCCACAAACCAAGCCTCAGTAAATTTAAGAAAACTGAAATCATATCAAGTATCTTCTCTGACCACAACACTATGAGACTAGATACCAACTACAGGAAAAAAACTGCAAAAAAAAAAAACAACACGCAAACTCATGGAGATTAAATAGTACGTTACTAAATAACAAAGAAGTTGTTAAAGAATAAGAAAGGAAATCAAAAGATTCCTAGAAACAAATGAAAATGAAAACACAGCAACCCAAAACCTATGGGATTCAGCAAAAGCGGTTCTAAGAGGGAAGTTTATAGCAATACAATCATACCTCAAGAAGCAAGAAAAGCACTGAACAGACAACCTAACTCTATATCTAAAGCAGCTGGAAAAAGAAGAACAAAAAAACCCCCAAAGTCAGCAGAAGGAAAGAAATCATAAAGATCAGAGCAGAAATAATGAAAAGGAAATGAAAGAAACAATAGCAAAGATTAATAAAACTAAAACTTTGTTTTTTGAGAAGAAGATAAACAAAATTGACAAACCACTAGCCAGACTCATCAAGAAAAGGAGAAAGAACAAATCAACAAAATTAGAAATGAAAAATAAATTGCAACAGACAATACAGAAATACAAAGGATCGTAAGAGAATATTATGAGCAACTATATGCTAATAAAATGGACAACCTAGAGGAAACGGACAGATTCTTAGAAAAGTTCAACCTCCCAAGACTGAACCAGTAAGAAATAGAAATTATGAACAACTCAATTACAAACACTAAAATTGAAACTGTGATCAAAAATCTCCCCAAAAACAAAAGCCCAGGGTCAGATGGCTTCACAGGAATTATATCAAAGATTTAGAGAGGAGCTAATGCCTATTTTTCTGAAACTATTCCATAAAGTTGCAGAGAAAGGAACACTTCCAAACTCATTCTATGAGGCCACAATCACCCTGATACCAAAATCTGGCAAAGACAACACATAAAAAGAAAATTATATACCAATATCACTGATGAACATAGATGAAAAAATCCTCAACAAAATTCTAGCAAACAGAATTCAACACGTTAAAAAGCTCATACACAATGATCAAGTTGGGTTTATTCCAGGGATGCAAGGATTCTTTAATATATGCAAATCAATCAATGTGATACACCATATCAACAAATTGAAACATAAAAGCCATATGATCATCTCAAAAGGCAGAAAAAGCCTTTTGACAAATTCAGCACACATTTATGATGAAAATGCTTCAAAAAATGGGCATAGAAGGAACCTACTTCAACATAGTAAAGGCCATATATGATAAGCCCTTGGCAAACATTATTCACAATGGTGAAAAACTAAAAACATTCCCTCTAAAATCAGGAAAAGACAAGGGTGTCCACTCTCACCACTGTTATTCAACATATTTCTGGAAGTCCTAGCTACAGCAATTAGAGAAGAAAAAGAAATAAAAGGAATCCAGATCGGAAAAGAAGTTAAACTCACTGTTTGCAGATGACATGATACTATACCTAGAAAACCTTTCAAAAGAAGCTATCAGAAAATTACTAGAGCTAGTCAGTGAATTCAGCAAAGTCATGGGATACAAAGTCAATACACAGAAATCACTTGCATTTCCTATAGTCAGATCAGTTGCTGAGTTGTGTCTGACTCTTTGCATCCCCACAGACTGCAGCATGCCAGACTTCCTTGTCCATCACCAGCACTTGGAGCTTGCTCAAACTCAAGTCGGTGATGCCATACAACCATCTCATCCTCTGTCATTCCTATATACTAACAATGAAAAATCAGAGAAATTAAGGAATCAGTCCCAGTCACCACTGCATCAAAAAAGAATAAAATATCTAGGAATAAACCTACCTAATGAGACAAAATACTGTATATGGAAAATTATAAGACACTGATGAAAGAAATCAAAGACAGTGTAAACAGGTGGAGAGCTATTTCATGTTCCTGTGTAGAAAGAATCAATATTGGGAAAATGACTATTCTACCAAAGGCAATCTACAGATTCATGCAATGCCTATCAAACTACCAATCTTTTGCAGAACTAGAACAAAAAATTTCACAATTCATATGGAAACACAAAAGACTCCAAATAGTCAAAGCAGTCTTGAGAAAGAAGAATGGAGCTGGAGGAATCAACCTTCCTGATTTCAGATTATACTACAAAGCTGCAGTCATCAAGACAGTATGCTACTAGCACAGAAACAGAATAAAGACCAGTGGAACAAAATAGAAAACCAAGAGAGAAAACCACACACTTATGGGTACTGTTTTTGACAAAGGAGGCAAGAATATACAATGGGGCAAAGATAGACTCTTCGATAAGAGGTGTTGGGAAAACTGGACAGCTACATGGAAAAGAATGGAATTAGAACACTTTCTAACACCGTACACAGACATAAACTCAAAATGGATTAAAGACCTAAATGTAAGACCAGAAACTATAAAACTCTTAGAGGAAAGCATAGGCAGAACACTTGAACTTAAAAGCTTTTGCACAGCAAAGGAAACTACAAACAAGGTGAAAAGACAGCCCTTAGAATGGGAGAAAATAATAGCAAATGAAACTGACACTTTCCAAAATATACAAGCAGCTCATACAACTCAATACCAG EMBV3_12553 GAAGATGTCAACCAGTTTCCACAGATTCATCCAAGGCTTCAGAACCAGGAGCTTGCTAAG Gene GeneID:767878|LOC767878:XM_002687726:33_cdna Constitutive 0 NULL GeneID:767878 5 GENE LOC767878 NULL hypothetical protein LOC767878 EMBV3_15702 ATCGTAGCAGACCCAAGGCAGTTCGCTCCTCAGAGAGTCATTCGGTCCCAGTGTCGTTAA Gene BVV0102_069578 + 1 EMBV3_01951 GK000007.2:6590077-6615481 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20162 AAGGGGCTGGTATACGCCAGCAACTTCCAGGTGCTAGTATATGACTTATTGCTGGGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42094 GCCTGGGTCCAGACCTAACCATTTGAGATACTCTGATCCGCACAACTGTAGAGACAGGGT Gene GeneID:618860|WDR48:NM_001076524:235_cdna UTR3_Alt 2 NULL GeneID:618860 22 GENE WDR48 NULL WD repeat domain 48 EMBV3_16696 GGTCAACCCCACCCTGTTCATTGAGCCCTGGGAAGAAAAGATTTGGAATAAAGGTCCCTG Gene GeneID:100296156|LOC100296156:XM_002697306:157_cdna Constitutive 0 NULL GeneID:100296156 23 GENE LOC100296156 NULL hypothetical LOC100296156 EMBV3_26297 GAATTAGCAGAATCTGGCTTGAACATGAGTGTTGGTCAGAAACAACTGGTGTGCCTTGCC Gene GeneID:100299180|LOC100299180:XM_002691941:5_cdna Constitutive 0 NULL GeneID:100299180 12 GENE LOC100299180 NULL similar to CG14709 EMBV3_41224 CCCCCTGCACGAGTATGTGGGTAAGAGAAAAGAATGGAAACCCTAAACCCTCAGCTATCT Gene GeneID:525988|GPX5:NM_001025335:25_cdna Constitutive 1 NULL GeneID:525988 1 GENE GPX5 NULL glutathione peroxidase 5 (epididymal androgen-related protein) EMBV3_41330 GGAAATGGAGTGGAACCAAAGCGGAAGGAGTTTTGTGCAGCTGGGCAGGCTGGAGGGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43705 AAGCGTGCTTCATTACCTCTTCCATACAAGGCACCATAACAAAAGCAAATGAGTTACTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32639 TCGGAGTGAGGATGCCACAGCTTTCTACATATCTTTCCTGACCGAGACCCAGGAGTGGAT Gene GeneID:614049|NPAS2:NM_001083763:95_cdna Constitutive 0 NULL GeneID:614049 11 GENE NPAS2 MGC142974 neuronal PAS domain protein 2 EMBV3_15221 ACACTAGGGAGGTTGTAGGTAAAGGAGGAGCGAGGATGGTGCAGTCCCATTAGAGAAAAC Gene BVV0101_005493 + 0 NULL GK000029.2:45308723-45315573 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34327 ATAGTACATGCAGAGGCAAGATACAAAATGGTTATAAGCATCACCCTCCATAAGAGGAAG Gene GeneID:532421|ZNF567:NM_001081599:670_cdna Constitutive 0 NULL GeneID:532421 18 GENE ZNF567 MGC142920 zinc finger protein 567 EMBV3_13748 TCCTCACCGCTCTCTTGGTCCTCTTCCAGACAGCACTAGGGAGCTCAATTTTGAAAGACC Gene BVT0102_094637 + 0 NULL GK000027.2:5274933-5327173 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155852 TCONS_00155851 TCONS_00154870 2 XLOC_094856 XLOC_094575 Coding TCONS_00155852 XLOC_094856 NonCoding NonCoding LOC100297617 27:5768683-5810036 x TSS116544 421 1 TCONS_00155852_1 35 3 0.989891661830141 0 0 0 0 0 0 0 0 7.67608123332541e-15 6.21927115690228e-06 0 4.65997916536093e-14 0.000136907837710805 0.000550733731491584 6.41336712718303e-11 9.57299462681813e-13 0 0 0 0 0 0 1.31518530853503e-09 0 0 0 0 0 7.72080133933448e-14 0 XR_232343.1 LOC101909358 PREDICTED: Bos taurus uncharacterized LOC101909358 (LOC101909358), 3e-180 634 93.56 0.992874109263658 NM_001025353.2 Gm6040 Mus musculus predicted gene 6040 (Gm6040), mRNA. 2e-29 132 76.40 0.39667458432304 0 noncoding CAAGTGACAGCTGGGGCTCAAGAAGCCAGAAAGGACGGAGCAGTCACACTCTTCCTGCCGAGGCAGGCGCAGGGCCCCAGGGTAGGAGGTCGTGTCTGCTCTGGTCCTGGAGGCCCTGAGCTCCTCGGACTTCTGACTGTGTCCTTGATCCTTCCCACCAGGACTTCCGGGACCTCCGTTCCAGGACAATGAGGCTCCTCCATGTCTTCCTCACCGCTCTCTTGATCCTCTTCCAGACAGCACTAGGGCGCTCAATTTTGAAAGACCCTGCCGTCTTCGGGGTGGAATCTGCCTGAAGCAAGGGACGCCGAGCTGTGAGCCCTTCAGAGGACCCTGCCGGGCATTCACCGTTTGCTGCAAAATAAAGCCGAGCTGATGGAGGCAGCCCAGTTGAGGAACCCGGCGAGAGACACTGAGCAAA TCONS_00154890 r 5' 19752 TCONS_00154891 r 3' 8863 EMBV3_21464 TCTCTACTCCCTGCCAAGGTCGCTGTGTTCCCTTGGGTAGGTTTACTCTGTACTAAGCTG Gene GeneID:338445|MAOB:NM_177944:16_cdna Constitutive 0 NULL GeneID:338445 X GENE MAOB MGC139719 monoamine oxidase B EMBV3_37581 ATCCACTTGATAACCTACCTGGGGTCTGCTACTGGTGTTCCTCACTTTGGAAGATGGAGC Gene GeneID:511318|CLDN6:XM_002697936:607_cdna Constitutive 0 NULL GeneID:511318 25 GENE CLDN6 NULL claudin 6 EMBV3_02688 TAATTTGAAAGGGTTGAAAAAAGGCAAAAGCAACCCAAAGGTCCAGGTGGAGGCCATTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19291 GGTATACACCTAAGGGATGTAATTATTTTGCATTTTTGGCCATGGGTGGGAAAGGGGTGG Gene BVT0101_041993 + 1 EMBV3_31799 GK000030.2:130300296-130307326 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245707 TCONS_00245710 TCONS_00245700 TCONS_00245701 TCONS_00245708 TCONS_00245709 TCONS_00245706 TCONS_00245711 TCONS_00245703 1 XLOC_150806 Coding TCONS_00245700 XLOC_150806 Coding Coding RPS6KA3 X:130193299-130305115 j TSS184384 7710 1 TCONS_00245700_3 712 0.04189364461738 22 0.93124357197156 8.48160641871169e-09 9.63640205753205e-08 0.000109076329869093 1.34043217080371e-05 0.000214213462923589 4.37210519484072e-63 2.94906580317412e-09 3.05231447468947e-05 2.70983657620182e-09 0.000259741040595435 2.01869662852954e-05 7.16415232672392e-11 2.60025161086934e-07 1.95208195437878e-09 1.46451823573399e-10 0.000345159238742999 6.07446016439239e-08 0.00275230763911304 1.2983460131876e-16 5.09204459262709e-09 6.6058237198842e-06 0.000277779184444409 0.000419848109879084 0.000871573738779863 0.000105566365582748 9.65115451614194e-55 0.000208849285950621 6.51027621602564e-07 1.14442605250709e-06 6.06314234755141e-05 XM_005228376.1 RPS6KA3 PREDICTED: Bos taurus ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3), transcript variant X5, mRNA. 0.0 1.380e+04 100.00 0.992088197146563 XM_005274575.1 RPS6KA3 PREDICTED: Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3), transcript variant X3, mRNA. 0.0 4976 94.14 0.419325551232166 TCONS_00245700_3 sp|P18654|KS6A3_MOUSE KS6A3_MOUSE Ribosomal protein S6 kinase alpha-3; 0.0 1481 99.86 0.998595505617977 6 coding 0 0 0 0 -0.185065950555382 0.626277587758895 0.0031334062998509 0.953994419232213 GCCCCGCCCCCGGGTGCGCGCGGCGGTGGCGGCGGCGGCCGAGCCTCGCTCTGAGAGACAGAATGGACAGCAAATTATGGATGAACCTATGGGAGAGGAAGAGATTAATCCACAAACTGAAGAAGGCAGTATCAAAGAAATTGCAATCACACATCATGTAAAGGAAGGACATGAAAAGGCAGATCCTTCCCAATTTGAACTTTTAAAAGTATTAGGGCAGGGATCATTTGGAAAGGTTTTCTTAGTCAAAAAAATCTCAGGCTCTGATGCTAGACAGCTTTACGCCATGAAAGTACTGAAGAAGGCCACACTGAAAGTTCGAGACCGTGTTCGGACAAAAATGGAGCGTGATATCTTGGTAGAAGTTAACCATCCTTTTATCGTCAAGTTGCATTATGCTTTTCAAACTGAAGGGAAGTTGTATCTTATATTGGACTTTCTCAGGGGAGGAGATTTGTTTACACGCTTATCCAAAGAGGTGATGTTCACAGAAGAAGATGTCAAATTCTACTTGGCCGAACTTGCACTTGCTTTAGACCATCTACACAGCCTGGGAATAATCTATAGAGACTTAACACCAGAAAACATTCTTCTTGATGAAGAAGGTCATATCAAGTTAACAGACTTTGGCCTAAGTAAAGAGTCTATTGACCATGAAAAGAAAGCATATTCTTTTTGTGGAACTGTGGAATACATGGCTCCAGAAGTAGTTAATCGTCGAGGTCATACTCAGAGTGCAGACTGGTGGTCTTTTGGTGTGTTGATGTTTGAGATGCTCACTGGTACACTACCTTTCCAAGGAAAAGATCGAAAAGAAACAATGACTATGATTCTTAAAGCCAAACTTGGGATGCCACAGTTTTTGAGCCCAGAAGCCCAGAGTCTTTTACGAATGCTTTTCAAACGAAATCCTGCAAACAGATTAGGTGCAGGACCAGATGGAGTTGAAGAAATTAAAAGACATTCATTTTTCTCAACTATAGACTGGAATAAACTGTATAGAAGAGAAATTCATCCACCTTTTAAACCTGCAACTGGCAGGCCTGAAGATACTTTCTATTTTGATCCTGAGTTTACTGCAAAAACTCCCAAAGATTCACCTGGCATTCCACCTAGTGCTAATGCACATCAGCTTTTTCGAGGGTTTAGTTTTGTTGCTATTACCTCAGATGATGAAAGCCAAGCTATGCAGACAGTTGGTGTGCATTCAATTGTTCAGCAGTTGCACAGGAACAGTATCCAGTTTACTGATGGGTATGAAGTAAAAGAAGATATTGGAGTTGGCTCCTACTCTGTTTGCAAGAGATGTATACATAAAGCCACAAACATGGAGTTTGCAGTGAAGATTATTGATAAAAGCAAGAGAGACCCTACAGAAGAAATTGAAATTCTTCTTCGTTATGGACAGCATCCAAACATTATTACTCTAAAGGATGTATATGATGATGGAAAATATGTGTATGTAGTGACAGAACTTATGAAAGGGGGTGAATTGCTGGATAAAATTCTTAGGCAGAAATTTTTCTCTGAGCGAGAGGCCAGTGCTGTCCTGTTTACTATTACCAAAACTGTTGAATATCTTCATGCACAAGGGGTGGTTCACAGAGACTTGAAACCTAGCAACATTCTTTATGTGGATGAATCTGGCAATCCAGAATCTATTCGCATTTGTGATTTTGGCTTTGCTAAACAACTAAGAGCAGAAAATGGTCTTCTCATGACTCCTTGTTATACGGCAAATTTTGTTGCACCAGAGGTTTTAAAACGACAAGGCTATGATGCTGCTTGTGACATATGGAGTCTTGGTGTCCTCCTCTACACAATGCTTACTGGTTACACTCCATTTGCAAATGGCCCTGATGATACACCAGAGGAAATACTGGCTCGAATAGGCAGTGGAAAATTCTCACTCAGTGGTGGCTACTGGAATTCTGTTTCAGACACAGCAAAGGACCTGGTGTCAAAGATGCTTCATGTGGACCCTCACCAGAGACTGACCGCTGCCCTTGTGCTCAGACATCCTTGGATTGTCCACTGGGACCAACTGCCGCAATACCAACTCAACAGACAGGATGCACCACATCTGGTCAAGGGTGCCATGGCAGCTACATACTCTGCTTTAAACCGTAATCAGTCACCAGTTTTGGAACCAGTAGGCCGCTCTACTCTTGCTCAGCGGAGAGGTATTAAAAAAATCACCTCTACAGCCCTGTGAAGTGACCTCAGTGAGATATTTGGTACCATGGTGTAAGTTGATAGCACAAGTTCTGGTGACAGGTAGCACATATCTGAGAGGCACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAATGCTGCTGCTCCTGCTGCTGCTCCCGCTTTTGTCTCTTCTCGCTTTAAATGATTGTTAGCAAGTTAGATTTTCCTGGAGCTTCGGATGAAATGAAAATGGAAACATGATGAAGATATATTCACTGAATCAACAAGAATAATAATGAACACATGAATACCACCTAAAAATACACTGAATAAAGTACTCTACACCACATAGCATTATTTTTATAGGAAATATTTCATGTCCCTTAAATATTCTTCGTTAGTTATAGGGATGGACAGTTTATGTTAAGCACTTAGCTTAAACAATCCGTTTCTATTAGCACTGTATCCCTTGTGCCATCCAACATTTTGTATGTTTTTGTAAACAGTTCATATACAGTACATTTCTGTACTGCTTTCTTTAACGTATACATGCCTTGTTTAACTTGGAATCTATTATTAATCAATTGACTATTAAATCTGGTTAAATAGTTCACCTGGATTAACAGTATTGTTGGACAGCCCTCAAAATGGCCAGATTGTAGAACAGCCTTTGAATGTAATACTTCCAAAATGTACATATCTTTCCCCATGTCTGTTTCACTGGTTCATTTGTTTGTTTGTTTCTTAAAGTCAGGTGCTCTGTCAGGCTAACCTAGAGAGCTTTTGTGATAGAGAAAGTTACTGTGTGTGTGTGTGTGTGTGTGTGGTATGACAGACATCAAGAGTACACCTATGAAGTTAGTCCATATACTTTGCAAATCCTTAGGGTCTTTTTTCCTTAATTAAGGAAGTAGTTCTTACATTTTTTATCTTAAATCGTCTCCATACTTAGAATTTGGCATACATTTGGGATTTTTCCCAATATACATCAAAGACCTTTAAAAGGCATGGTGAAGAGATGGCAAAGGAACATTTAGCAACAGGTCATTGAAATCCTATTGGATCTTTTGTGTCTAAATAGATCAAATTGCAGAATTTAGCATATGAATAACAGGATACTGTTCTTATATACCTGCAGGAAAAGTATGCTTTTTTGGGGGGGAAGAAAAAGATAAATCATAATGAATTATATCCCATTAAGATGCTCTACAGTAAACACTAATTTGAATGTAATAAAGGCCATGGGCCTCTCTATGAAATTTGGACTTAAACTTTCTTATTCTAGGGAATAAAACATTCTGGATCAAATATTATCTGTTCTAACCTTAAATCATAGCTGAAGTAGACTAAGTGAATGTTTAGCATTGAGTGTTTTCTGAATTCCTCCTAATGATTTATAGCCATATAATGCTTTCTTTTCTTTTTTAAAAAATTTTTATTGGAGTATAGTTGATTTACAATATTGTGTTAGTTTCACATAATGCTGTCTTTAATTTCAGAAATGATCAGTTTTCATAATGGGCACTGTATCTGCTTATTCATTATCTACATCAAATTTGGTAGTTTCCACAATTTCATTAAAGAAATGTCTGCATCCATTATTACCTGTATCTTTGCCAAGCTACCTAGCATACATCAGTATGTAATACAAAAAACATACGAGCAAGGAAAAGGTGTTTTAACTTATCTCGTCGAGAATGTGCCCGAACAGATCTTTCCTAGTCATGTACTAAGCCATTTACATCAGAAATCTCTTTTCCTGCCAGAAGCTTTAAATCTTCCCCCTGAGAGTACAAAGCCAAGAAAGTATGGTTTATCTAAATGTCTTGGAAGCCACTTGTTATTCCTTAACTTCTCCTCTGTGTAATTCAAGAGAAAGAGAAAAGTGATCATGCCATTTGCCCAGATGACACAAAATGATTATTGCCTAGAAATCAAATATAAATTTATCTTCTAAATAAAAAAATACATAAGAGGAAGGATTTCAGAAAATCTAGATGGACAAAGTTTTAAAATATTCTTGAGTATATGGATGCTAACAATTAACACCTGCTTTCCATTGCCTGGAAATAAAGGTTTTTTTTTTTTTTTTTTTTTTTCCTCCTCTATTAAGTGTTTCAAACCAGAAAAGTGAAGTTGCTCAGTCATGTCCGACTCTTTGTGACCCCATGGACTGTAGCCCACCAGGCTCCTCAGTCCATGGAATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCAGTCATCCCAAATTCTTGTCACTTATGTAATTCTAGGCAGAAAATGGATCTTTTCAGATTTTTGACACTGATGCTATTTCATAAGTGCTTAGGTGTATTGTTAATCATAGTCTTTTAAAACCAGAAGTAAATGTGTAAATCCTTATAAATTGTCTAGTCCAACTTTCTCATATTGCATGTAAAGAACCTGAGACCCAGAGCAAAGACTAGAATCCTTAACTTCCCATTCAGTTTCTTTCCCTCATAACACCGTGCTGCCTTCCCCTCATATTATCACATGACCATGTGCTGAGTTGTTCAAAAACTATAGTTCTTGGAGCAGTCCTCTGCTGGTACATGAATGCCTTCTTTGCCTTCTCTGCCTAGAAGAGCTGCCAGTTTTATTGGAGATAACTGGTTATATGTTCACAAAACTGAAGGCCTTCTGCCTAAAAAGCAGTTCATACTTTATTTCATCTGTGATTCTGGTGTTCCTATTGCCTTTGACTTAGAGCAGACAAACTTGGCCAACAATGTGCTCTAAATGTAGTGCCTCTGCTGGGATAACCTTTCCATTAATTTCTTCAAGTCCAGTTTCTCTTGGGCCCTACAATTGGAGTGAGGCCCTTTCCCATTAGTGCTGCTGGTTACTTCCCAGGAGGTTTTAGTTCAGTCTGAAGGATATTTCAGTATGAAAGAAGGAACTAAACTAACAGGCCACTTTCACAAACCTCCTCTTAGCTTATAATCCAAAATAATCCAGAATGGTAGGTTGAATTTAACATTACCAAGCACATACTGGAAAATCTGGATTACATTGTACCATGTGTTTTCTATCTTCCCTTTCAAGCGATGATGCTAAATTAAGGTAAGTTTTTTGTCCTCTGAACTTTTTGTATAAGTAATTTCAGTTCCTAATTCATAGACATGTCTTCTAAGTACAATAGACTCTTCACTTTAGCAGATTTGATATAGATTCATTTATTTGCAAGCAACCCCAAAAGTCCAAAAATATAATAATTTTGACAAGGCACAAAGTTGGGATGCTGTGAGGCTGGAGACTGACATGTGGGAAAAGTCACTTGGTGAGTGTCTGGAGAGGGTGTGGTGTGTATGCAGTAGAGATTCCGCATTTCACACACAGTGGGCTACAAGGAGCTGGTTTGGGTCAACCTTTTCCCAACTATTTTTAAGAAATGGTTACTGTTGGGACAAGAGAACATCATGGGAAGTGGGGCTAGTCTGTTAGCTGTACCTTGTACCCTCAGCTCAGGAAAGGCTTCATGATTGGGCACAATGGGTTGGGTAGGAAAAGCACTAGGGTACATCCAGCCTCAGGTGACAGCAGAAAAGCATTCACGATTTGGGGGCTTAGTACAAATGTGCATCACCACAAAAGCCAGCAGTACACACTTCAACATGGCTGTAATTTTTCTCAACTTCCTGGCCTTTATACATGAGCTGAAAATTTTCAGGTTGCTTGACTATATTTTATAGAGAAAATTCTCTCTTATGGTGGTATCGAGCATTTGAAATTTACAAAGGCATTAGGACAGATATCTCAGGAATGTAAATGGTCAGAAAAGGTCTGCTTTCTGTGATTAACAAATACGATGAGTTCCATAGCTGACCTTGGTGCTTAAACCAGGGGGTTCCAACTAGTGCTAGAGCTCTGTCTTCTGAAAGGTCCACTTCCATGTGACTAACAAACTGGATGTATACTTTGAGCCTTATTTAATTCACAGATAAGTTGACTTAACTCAGCATTTTTATTTCACTTAATGAAAACAGCCCTCTCTTCACCTCCAGATTGCTTACATTTTGCTGGTCTCCCCAAGTGACCATTAGTGGAGACCAATTAATGAAGGAATGAAATTTGCTGGTTTTTTTTTTTTTTTTTTTAATTTGTTTTCTTGGGACTGTGGTGTTCTGCAGAGCCATGCTTAACCACTTTTTCTAGTGAAGAGTCTACAGAATGATAATAACTAAATATGGATGGCCAAGAAGATTTTGTATCTACAGTGCGCTTTATATATTTTTGACACTGCTGTATTCTGTGTGATCGAATGACCTGTAACTGGTTCCAATGTGACTGAGTGTTCTCAATGAATTCTAGTAGCAAAGTCAACTTAATTTTCTTAAGCCTTGTATTACTATCTGTCTCACATTTACCACTTTGATTCCAGTCTTTTAACTGTTCATAACAGGGCATACCAAGGGTTGGGATGAGAGCCTACTTCCTACCTCTAAAGGCACTTTGCTCATTATTTTGCCATATAACCTTGAAGTGCATGATAAGCTGTTTAAATGTCCATGACTTCTCCCAGAGCAACTAGCAAAGTATATGACATTGAATAGAGATTAGTGGAAAGGAAAATTTTTAGAGACTAAACAGAGGTGTAAACCTCAAGAAAACCTCTTTAGAGCACATACCATTGGAGTACAATGTATGTAAATGTATGTGAGAAGAGAGTTGCTGTAATAGTCCTCTCTAAGTAGATTAGTTTAATATCTAATGGAAGTGAAAATCTTTACTCCTATTATCACTATAGTACTGAGTGAACTGTATACTGAGTTTTTCAAACAAGTACTTAAAGTAGAACTTTAAAATATAAAGCAAGGGCATAAGGACAAAGGTTTTGGTTTGCGTTTCTCTAAGTGTAGTTTACCATCTAAGGCTTTCTTTTTTAATTAAAAAAAAAAAGCTTCAAGGTATTGCCATTCCTTAGCATCCTTAATAATTATGGGTGATGAGTTTTTAACTCTTAAGATTATGTACCTGTATTACATTTATCTTAACTCTTACCCTAAGCAAAAGGGAAGGTATACACCTAAGGGATGTAATTATTTTGCATTTTTGGCCATGGGTGGGAAAGGGGTGGGTATCTACTTAAACAGTTTTTAAAAAAGAAAAAAGTCACAAATATTTTTATACTCTTATATATGATTTTACTTTATACTAGTTTCTCTCTAGTAAGGCATGCCAGAAGCCCATGACACCATATCATGAGTTTATATGTATTGTACCTTTTATTGGTGGTTAAATCTCATCAGATGCTTGGCACTGCTGCCATGATTATGAAATGCTTGTAAAGGATTAAATATCACTGAGTATTTTAAATTGTTTTACTTAAGAGTCTAATCTGGGAAGTTTTCAAATCATACTATTAATGTATAATCTAAGCTCTTTCAGATGTATCCACGAATAATCCTGGAACAATATTGCTTGTATTCCTGTCACAGAACAGGTTTTGTAATCTTTAAAAGAAATGAAAATTTATATAATAAAGTTTCAAATAAATGCATG EMBV3_40786 GCAAAGACCCTCTTGGCCACAAGAGCAAAGACAGAATATGCTAAGCCCTTCCAGGAATTA Variant GeneID:768032|C3H1orf141:NM_001077091:67_cdna 117^455 1 EMBV3_15329 GeneID:768032 3 GENE C3H1orf141 C1orf141 MGC137116 chromosome 1 open reading frame 141 ortholog EMBV3_39026 CCATGGACCCACCCAGAAACTGTGCCTTCGTCACCTATGAAAAGATGGAGTCAGCAGATC Gene GeneID:540158|RDBP:NM_001076204:183_cdna Constitutive 0 NULL GeneID:540158 23 GENE RDBP MGC140563 RD RNA binding protein EMBV3_38389 CTCTCAGGATGGCCCTGCGCTCTGCTGGCCTCCTCCTTCCTCTACCGGACTCTACGGACC Gene BVT0102_196239 + 0 NULL GK000003.2:121274331-121284543 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171665 1 XLOC_103890 NonCoding TCONS_00171665 XLOC_103890 NonCoding NonCoding - 3:121278564-121280156 - TSS128009 914 1 TCONS_00171665_3 120 0.454048140043764 2 0.426775612822124 0 0 0 0 6.75216565209852e-07 0 9.57063717598069e-06 0 0 0 3.07109270337005e-06 1.30404345855985e-06 1.5696297693784e-06 0 6.70979958527738e-07 5.77934061653716e-05 2.01826792309614e-06 0.000320478470787257 0 0 6.64273218429455e-06 6.76575410785025e-07 5.21379070164435e-06 0.000975950910505133 2.27411746431121e-05 3.85420398835347e-06 0 5.2544718007807e-06 1.01460822409505e-05 0 XM_866575.4 NEK11 PREDICTED: Bos taurus NIMA-related kinase 11 (NEK11), transcript 7e-47 192 95.04 0.131291028446389 0 noncoding 0 0 0 0 -0.28880448221677 0.0616165878831449 0.00646027184546463 0.909350673553969 GTAGGCAGACTCTGGTTTTTTGGGGGTAGATGCTCGAGAATATCCAGGGAGACTCCTGAGGCTCGATCCCGCCTTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCACGAGTGGAATGCCTCACCGGCTCCCGGCACCTGCCCGCTTCCCTGCACCCCCAGGCTGCTCTGACCCAGGCCTCTCAGGATGGCCCTGCGCTCTGCTGGCCTCCTCCTTCCTCTACCGGACTCTACGGACCGGCCCTTGGGCCATCCCCAGCTCCGTCATGGCCGCAGTGTGGCCCCCAGCTCACTAGTTGTGTCTCTGCTGGGATTAACTGGCTGGAAGCTACTGCCTCCTGCCCCTTTGGTTGGGCTTCCCTGGTGGCTCAGATGATAATGAATCCGCCCGCCGTGCAGGAGACCCAGGTTCGATCGCTGGCTTGGGAAGATTCTCTGGAGAAGGGAAAGGCTACCCACTCCTGTATTCTTGCCACGGACAGAGGAGCCTGGCGGGTCGCAGAGTCGGGCCCAGCAGAACAACTAACAGCCGTGTGTCTGTCTTCTCTCCTCCCTCCCCTCCCCTGTCTGTCTCTCTCTCCTTCTCTGTCTCCTTCTCTCTCCTCTCTCTCTCTCCCTCTGTCTTCCTGGACTCCAGTGCTGTGCTCCTTTTCCGTATGTGCACAGAGGGGAAAGAAGAAAAGATCTGCAAGGTTTCCCGTGTGTTACATGCTTTGTATGTTCCGTTCCACTTAATAAAATTAACGCCCCCTGTGAAGTGGGTATTATTTCCATTTTCCAGATGTGGAAATTGAGGCTCAGCGGCTTGTGATGACCTCACAGGTTGGGGTAGAAACCAGCTTGCCATCCATTTGGTGGTTCCCACATGGTTCTTTTTTGAATGTTTTCCACTGCGTGTGATTAAAGCAAT TCONS_00171664 s 3' 4235 TCONS_00171664 s 3' 4235 EMBV3_21686 CATAACCCTGGTAGGTGCAACTGACAATAGAGGAGAAGCTGGGGAGGGTCTTACCTGTGT Gene GeneID:286764|PARP1:NM_174751:8_cdna Constitutive 0 NULL GeneID:286764 16 GENE PARP1 ADPRT poly (ADP-ribose) polymerase 1 EMBV3_42240 GAAATGCACTCTACCAGAGAGGGCTCAAGAACAGGGTTAGAATGACACTACCCAACTCCC Gene GeneID:281422|PRLR:NM_001039726:9_cdna Constitutive 0 NULL GeneID:281422 20 GENE PRLR NULL prolactin receptor EMBV3_39287 AACCTGCCTGTTTACCCACTGGATATTGTTCGGAAAATGCGAGACCAGCGCGCCATGATG Gene GeneID:511010|PTPN3:XM_002689912:25_cdna UTR3_Alt 2 NULL GeneID:511010 8 GENE PTPN3 NULL protein tyrosine phosphatase, non-receptor type 3 EMBV3_40974 CTCCAAAAAGTCAGCCATGTATGAGAAGTATGACATCAGCAACGGTGGACAGCCAGGTGG Gene GeneID:522889|TREH:XM_002693077:409_cdna Constitutive 0 NULL GeneID:522889 15 GENE TREH NULL trehalase (brush-border membrane glycoprotein) EMBV3_17586 TTGACAGAAGTCCTACCGGCTCAGGAGTGACAGCCCGAATTGCCCTTCAGTATCACAAAG Gene GeneID:510525|MGC128929:NM_001034386:82_cdna UTR3_Alt 2 NULL GeneID:510525 10 GENE MGC128929 NULL proline racemase-like EMBV3_08897 AACGTGTTGAACTTGACCCACTGATGATATTGTTTTATCCTTTTAGGTAATTAGGGTGCC Gene GeneID:513626|FANCM:NM_001104976:232_cdna Constitutive 0 NULL GeneID:513626 21 GENE FANCM MGC148519 Fanconi anemia, complementation group M EMBV3_14809 ATCTCGAAGAGAAGGCCCAGGGGACATGGGGGGAAGAGGCCTTGGTGGTCTGAATGAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01943 GAATGGTTCTTCCTTGCCCAACAACCTCCGAGTTTCCATCTGATACAGTAGAGTCACAAC Gene GeneID:511223|VPS36:NM_001098939:94_cdna UTR3_Alt 2 NULL GeneID:511223 12 GENE VPS36 MGC157100 vacuolar protein sorting 36 homolog (S. cerevisiae) EMBV3_32101 ATCAAATCTGCTCTAGAGTGGTGGTAGACCTTTCAGAACCTCGATGTGGTTAGCTTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43708 GAGCAGTGTTGCCCCCTTTTAAAAATCTTGAAAAAGGTTTCTGCACTTACATGGTTTGCC Gene GeneID:514991|ABCE1:NM_001083685:10_cdna Constitutive 0 NULL GeneID:514991 17 GENE ABCE1 MGC139587 ATP-binding cassette, sub-family E (OABP), member 1 EMBV3_06409 TTCTACCGCCAGGCTCCTCTTTCTGCTTTGGAAAGCGTGGAATAGTTTAGGGAGTTTGGC Gene BVT0102_257848 + 0 NULL GK000014.2:26180920-26271676 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34402 AAACATGTCTATTTGAATCGGAAGGTTTGGGTATGGTGTGGAGCCTCCTGGTTTGATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04262 TGGAGACGGCAGACAAGCAGGCTCTGCACTCCGTGTCGACCAGTTAAAGTACGACGTCCA Variant GeneID:506198|GOSR2:NM_001098885:209_cdna 144^252 2 EMBV3_43688 GeneID:506198 19 GENE GOSR2 MGC148480 golgi SNAP receptor complex member 2 EMBV3_10468 GCCGTAGCTTGAGGCCATGGGAGGGATTGATATCTGAAGCCTATTTGCGAGGAGAAAGTT Gene BVV0102_345383 - 1 EMBV3_04560 GK000030.2:68288392-68301539 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060244 TCONS_00251852 TCONS_00060243 TCONS_00060246 TCONS_00060247 TCONS_00060245 2 XLOC_036632 XLOC_154793 Coding TCONS_00060247 XLOC_036632 Coding Coding LOC100847168 15:80106906-80121324 = TSS45065 13415 1 TCONS_00060247_16 318 0.813268729034663 2 0.0696400083235069 9.74881464238676e-08 4.39784517258023e-07 3.42331638399853e-07 5.38543698196566e-08 3.94503123443177e-08 0 0 2.62868703938207e-07 1.30796614632668e-08 6.95690797797859e-05 2.88953059015478e-05 1.22349706541304e-09 4.70489549500157e-06 5.62135455232058e-05 9.9319988123883e-06 0.000315872745530088 0.000701779134558836 0.000937633434487817 4.84601613087345e-07 8.50884315735058e-07 2.4430993237784e-07 0.00104995025431993 0.000777186600043031 0.000896388649140197 1.79367265630186e-07 5.74888179882457e-07 5.0405168906463e-07 0.000195133138509972 8.78589577356441e-05 0.000483238958627208 XR_238500.1 LOC788150 PREDICTED: Bos taurus zinc finger protein 480-like (LOC788150), 0.0 1945 85.44 0.125307491613865 TCONS_00060247_16 sp|P61570|ENK17_HUMAN ENK17_HUMAN HERV-K_11q22.1 provirus ancestral Env polyprotein; 6e-25 106 30.41 0.60377358490566 0 coding 0 0 1 1 0.460273172145464 0.29580616187116 -0.159039202182455 0.0248932149049435 GTGGGACGGTTAGGATTGTACCTGTGGGTGGCTGGCACCCCTCTGCAGTTTAGGCAGGGTGAGGAGGGTACAGAATCAGTAAGAATATTCTCTAGAAGAATGGGTTTCTCTGCATCTTAGAATAAACAAATGTTTATTGAAATATTACTTCATATGTTAGCCCATAGAGGCATTAAAGTAAGCAGAGGAAGACTGTCTAAATTTCTACGTTTGTTTTATACTTTGCATGGGCCAGAAAAGGTTTCTGTAGATGCTTTTGTTCTGTGGAATATCATTATAAATATCCTGGATCCCCGTCATGAGGCTGTTAGATAGCCTATGGGGGAGGCTATAGCGGTGGATGGTGGTGGGTCTCCACCTTCTGTGCAGATCATGTTTTCTGCCATTGATGAAGAAAGGAGGGAGACTGTGCTCTACCTCCCAAGGAAGGAGAGGGCTTACAGGATGCTGCAGCCAGGTGCCCTGGCGAGCCCACTCCCCCTCTACACAAACCTTTACAAATTTATCCACCACTTTTTTATTTAAGGCGACCACCGCCACCTCTGCTTGCACCTCCCAGGGCCCAGGAGTTCCCCACTTAGCCTCCAAAGCGTCCCAGAGCATTGTCTAAGGCTGAGAAAGACAAAGAGTTTTTTTTTTTTTTTTTAAACAAAGGAGCTTTTTAAAGCAAGCGCAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTTAGGGGGGCCTCACCAGGCTAAAAAAAAAAAAAAAAAAGGATTAATCATAATGGAAACGATTCTACAAATAAAAAATGTTTCTCCTGTGGCCAAATGGGGGCATTTTTGCCAGCAATGTCCTGCCAAGCAGGGACAACAAGCCCTGCCGATCAACCCGAGGTAGCACAGGACTGGACCTCAGTTTCACCACTGCAACAATATTAACCCCTGACATGCCAGTTACTCTGATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGGCTTGTGCTGGGGCGTAGCTCGCTTTCCCTTCAAGGAATTTCGGTGGTGCCTGGTGTAGTAGATTCTCATTATACTGGGGAAATTAAAGTTTTGATCTTGCAGCCTACTAAAACTGTGCAAATTAATAAAGGTCAAAGAATAGCACAGCTTTTGCTTTTACCTTATTATCAGACAGGAAAAACCTTTACTTCTTAAGCTAGGGGCCCCAGAGGATTTGGATCCAGTGATCTAGCTTTTTGGGTGCAGGAAATTACAGCTTCTAGACCTTCAAAAGATCTTTTAATTCAAGGAAATAAAATGTCAGGGCTGTTAGATACTGGAGCAGACGTCTCTTGCATTGCTGGAAAAGATTGGCCCTCGTCCTGGCCGACACGTTTGACCAGTGCAGGCTTGGTAGGAATAGGGTCAGTGCCCTCAGTTGCTAAGAGCTCACAGATTTTGACATGGTCAGATGAGAGGGGGGCACAAGGCACTTTTTGTCCATATGTAGTTCCTTCACTACCTTTTTCTTTATGGGGGAGAGATATATTATCTCAGATGGGAATGCTTTTATATAGCCCAGATGAAAAGGTTACTAATCAAATGCTGCAAATGAGGTATAATCCTGATAAGGGGCTTGGTAAAGATCAGCAGAAAATTGTTTCTCCATTAGAGGCGGTTCCTAACAAAAATACAGAAGGTCTGGGATATTCAAATTTATCCTAAGGCTGTTGCTCTTGCTGTCGACCCTATTACCTGCAAATCTGATGATCTGGTGTGGGTGGAACAATGGCCCTTAACAGCTGAAAAGTTACAGGCAGCTGAGGATTTAGTTATGGAACAACTGGCAGCCGGCCATATAGAGCCTTCTAATAGCCACTGGAATACTCTTATTTTTGTTATTAAGAAAAAAATCAGGAAAATGGAGATTGTTACAAGATTTGAGAGCTATAAACACAACTATGGAAGACATGGGGGCCCTCCAGCCGGGCCTCCCTTCCCCAGTGGCTGTGCTTTTCAGTATAATATGATGGTTATAGATCTAAAGGATTGTTTCTTTGCCATTCCCCTGGCTGATCAAGATTATAAACGGTTTGGTTTCAGTCTCCCTTCAGCTAATTTTAAACAGCCCTATAGAAGTTTTCAATGGAAGGTTTTGCCTCAGAAAATGAAAAACAGCCCTACCTTGTGTCAGAAATTTGTAGACCAAGCTGTGAAAAGTGTTAGAGGAAAGTATAAAGATCTATATTTGATACATCTATATTTGGCAGCTCATAAGGACAGAGCCTTGTTGCAACAAATTTTATCTGAATTGATTGAGGCCTTGGAAAGCAGGGGTTTAAAGATAGCTCCAGAAAAGATACAAGTAGATCCTCCTTTTTCTTATTTAGGGAGGGTATTAAATACCCATACCATGAGTCATGCTCCTTTGTAGCTGCGGAGAGATCCTTTACTAACTTTAAATTGTCACACGACTGTATGTTCCTCGGTTCTTTGTCTCATCACAACAAAGATTTGGAGCAAAGGACATTAAAGCCCTTGGTGCATCACAGCTCTCGGGTCTTGGACAAATCGTGTTATAGCTCTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAGAGAGAGAGAGTGAGAGAAAGAGCGCACGCACATGGGAGAGAGAGAGTCCAAGAGAAAGTGTTTTGGCTCCTCCTTTTATATGTTTTTTCTTCCACCTAGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGGCTGCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTCGGACCTTCCTTTGACCTTCCTTGTCTTTTAGCCACCACCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACAAAATGATTTCCAGAAATTATTAGGGGATATTAATTGGATACACCCACATTTAAAACTGACTACTGCAGATTTAAAGCCTTTGTTTGATTGCTTAAAAAGCGATCCTAATCCCAGTTCTAAGAGAAAGTTGGTTAGTGAGGCAGAGTTGGCTCTTGTTAAAGTGGATGAGGCTTTAAATGATCAGTTAATTAGGGTTAATATTACCAGAGGATGGGATTTAATTATTCTTGCCTCAGAACATACACCTATAGGATGCTGTGGCAAGAAGGCCCATTGGAATGGCTCCATCTACCAGTGACCCCAAGAAAAATAGTTTTATCTTATCCCAGCTTGGTGGCACAATTAATTATAAAAGATAGAAAAAGAGTGTGGAATTTTTTGGAAAAGAAGTAGCAAATATAGTGATTCCAATCAATAAGGATCAACTGCAATTTCTTTTACAAAATAGTGATGATTGGCAAGTTGCCCTGATAGATTTCAGGGCAAATTTTGTTTCATTTGCCCTCAAGCCCCCTACTGCATTTTTTTGAAAACACATCCAGTGATTTTTCCAAAGAAATTTTCTATTCAACCTCTGGAAGAGGCAATTTTAGTTTTCACAGATGGTTCCTCTAATGGTAAAGCAGTCACAATTATTGATGGAAAATCCCATGTTCAGGTAACTGAAGAGACATCGGCCCAGAGAGCTGAATTGAGGGCGATTATTTGGGTTTTTCAACATTTAAGAGACCACACCTGTTGGGGGCCAGAGTGAGGTACTCTGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAAATCCTCGAGCGTCTACCCCCATAACCAGAGCCTGCCGACTTTACTACTTTGTGCTCTTACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACCACCTCTTTCGGAGAAGGAGTTAACCTAGAGCTTCAGTCAATAAAAACTCTTGGGTGTGACAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTGGCCTGCCTGACAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCATGAGAGGCACGAGATGCTTTAAACCTTCTAAAAACAGGTTCCTTAGAAAAGTTAGGAAACTATTAGTATAAGTATAATGGGCTAATTAGAAATTGTGTTGGTGAAGAGTTTTTCATTTGCTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACATATTAATGAATATATAGAATTGACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAACTAAAACCCACTACACCCTCACCCTGTAGGAGTGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTTAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCTCTCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTTTGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAGCTTCTTGTCTTGAAGTTTCATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATATCTAATTGAAGCTATTGTATCCTGATCCTCGCCTATGCCGTCTCTCCTTCGAATACCCTGGATCAGCCGGGGCTGGTCCCCGGCACACACCTTCAATCTTCTGACTGACTCCCGATATATTGTAGGGTTGTTTCCTCATATTGAGACTGCTAATATTACGGAAAATAAAACTGCCATCTTCTCCTTGTTATCTGATTTATAGAAGGAGATTAAACATAGAGATAAGAAATATTTTGTGGGACATATTAGAGCCCATTCCAGCTTATCTGGCCCTTTGCATGAAGGAAATGCTTTGGCAGATGCATTAACTAAAGTAATTGCTTTAAACTTACATGAAAAGATTGACAAGGCCAAAAATTCTCACAAAATTCATCATCAAAATGCAGCTGGCTTAAGGTATGAATTTCATATCCCTAGGGAAGCAGCTAGACAAATAGTTAAGTTATGTCCAAATTGCCCAACATTTAATCCATCTATACAATTAGGAGTAAATCCCTGAGGCCTTAGGCCTAATGCTCTCTGGCAAATGGATGTAACTCATATTGCAGCCTTTGGAAAACTGTCCTTTGTGCATGTTACCATGGATACCTTTTCTCATGTTATTATAGCCTCTGCTAGATTAGATGAGGGACAGCGGAGCCTGGTGGGCTGCCATCTCTGGGGTCGCACAGAGTCAGACAGGACTGAAGCGACTTAGCAGCAGTAGCAGCAGCAGATTAGATGAAGCAACAAGAGATGTAACTGAGCACTTGTTTCAATGCTTTTCCCAAATAGGACTCCCCGAACAGATAAAAACAGATAATGCTCCAGCTTATACTTCTTCTGATTTTAAGAGATTCTGTCAACAATTTTCCATAGTACATTCAACAGAAATACCTTATAATCCCCAAGACCAAGCCATAGTGGAAAGGGTGCATCAGACTTTAAAAAGTCAGATAGCTAAATTAAGACGGGGAGAATTTAAATATTCCTCTGCACATCATGTTTTACACCATGCTTTGTTTGTAATTAATCATTTTAATGTGGACACACAAGGGCAGACTGCAATGATGAGACACTGGACTCATGAAGGGGCTACGATTTGGCCTCTGGTTAAGTGAAAAGACCTCCTTACAGGAGAGTGGAAAAGGCCAGATATACTGCTAACTTGTGGGAGAGGGTATGCTTGTGTGTTTCCACAGAATTCCACTTCTCCTGTTTGGACCCATGAGGTTACTAAAATCCCTGAAGTCCTGGAGTCCAGGACCGAAAAAAGATGGGGACACCAGAAGCTCGTTGAGTCCAGACCTGAGGAAGCCAAGGAAACACCAAAGGGCGAGTGACCCTTCACCTGAGGCTTCACGACTAGTACATTGCTTCAGGCACCTGGAACTTCAGGAGAGACATGCTGATCGAGTTCAACCGTATTCTGCCCCACCTCGTCACTGTCATCGTACTCAAGCAACCACCTCCAGCACGGAGAAATGTTTACAATGTTATACGTGTGAATTGTTTTATATCAAATTGTGTTGATGGGAATGATTATAATAAGTATAAGGCTGTGATGATTGTAAAGCAACCACCATATTTGATGGTTCCTGTAAAATTAGAGGGACAATGGTTTGATGATTATGCATTGAAAGTTTTATATGAACTTAATGGCTTAATTTCTCAACCTAAGAGATTCATTGCAGCTCTGGTTGTGGGAATAACTGCTTTGATTGCCATAATTACATCAGTTACGGTTTATGCTGTTGCCTTGTCAAAAGAAGTGCATACGGCCTCGTTTGTCGATCAGCTGTCCAAAAATGTCTCTGTAGCTCTTACTATGCAGGAAATTATAGATAAGAAAATAGAAAATAAGGTCAATGCTTTAGAAGAAGCAGTTCTGCTTATGGGGCAAGAAATTACAAATTTAAAAATTAAATTGTCTTTAAGGTGCCATGCTGATTTTAAATGGATGTGTGTTACCCTTCTACAAATGAATGAGTCCATGCACTCTTGGGAACGCATTAGAAATCATATTTTAGGCGTCTGGAATCATTCGGATTTTAGTATTGATATTTTTAAGTTACATCAGGATATTCAGAATATGAAGCAGGCGGAGTCTGACTTTTCCTCTCAATGGCTTTCTAATTCCCTCTTTGAAAATCTGGAGGGATATCTTTCCCATGGATCCTTTTCTACAATAATGATTAATGTGGCCATGTGCTTATGCCTGTTAGTTCTGATTTGTGTAATAGCCCCGTGCCTTTTCAGAATACTCAGCCGAAGTGTCTCTGCTCTATCTACTGAGTTTCATACCTATGCTCTAAAAAATAAAAAAAGGGAAGATGTTGGGAGCCGCCTTAGGCATTACTGACAAAATGGAGGCAGGGTCCCCAGCCCCCCTCTCCTCATTCCACAGGCACAGAGCCTGGGATGAAGGAGTTAGGCCTTTTAATTCTGACTTGTCTTTTCCTCTCCTTGGCGAAGTTGACTGAAAAGGAATATTAAGGTGCTTATTGGTCTTGAGAGGAGCATGAGAAGGCACAAAGCCTTCTGCAGCATTGCTCAGAAAATATTTCATAAAGTTAATCATTGACATTTGTTCAAGGACTTTTTACAAAAGACTGTTCCAGGATGAGCACATAGGCTGTAGCTTGAGGCCATGGGAGGGATTGATATATGAAGCCTATTTGTGAGGAGAATGTTTATGGCAAAGGAGTTTACTGAATTTAGGGCTTAGAAACAATTAAAATAGTTAGAAGTTAAAGATTTAAGGAATGCTGTAAAGTTAACGTATTTTACCATAGCTTATAGAAGTTAGGAATTTTTAGAGACACTATAGCTAGAAGCCTTTTTAGGAGATAGTGAGCTCAGGATGTTAGGGGCAAACAGGACTTAGGAGGATAAGTAGTAAACTGAGGAATGTAGCATGAGTTACAATGTAATCACAAGTTAACTATAGGACACATTAGAAGAGGTAGATAATAGATGATAAGGCTGATTCTGAGAGAATCACTGAAGCAGGAACTCTGTTTGAAGAGCAACAATGATTTATGGAGGTAATAAATCTGGGAGAGGGGCAAGTGAAAATGTCAAACCTCTGGCCTAATGTTTTTGTGAAAGTATAAAAGAGAATCTTAAACTTGAAATAAACAGGCAGTCCATAGAAAAATGAGAGGCTGTCTCATTGGCCGACACCGTCATTTCTTCAGGTTGAATCCCTGGTTGCTGGAGTTGGATTCTGGCACTAGTTGTTGATATGACTGGTGATGGAAGCAAGGTCCAGTGCTGTAAATAACAATATTGCATAGGAATCTGGAATGTTAGGTCCATGAATCAAGGCAAATTAGAAGTGGCCAAACAGGAGATGGCAAGAGTGAACATCGACATTTGAAAAATTAGTGAACTAAAATGTACTGGAATGGGTGAATTTAACTCAGATGACGATTATATGTACTACTGTGGGCAAGAATCCCTTAGAAGAGATGGAGTAGCCATCATAGTAAACACTAGAGTCTGAAATGCAGTGCTTGAATGCAACCTCAAAAACGACAGAATGATCTCTTTGTGTTTCCAAGGCAAACCATTCAGTATCACAGTAATCCAAGACTATGCCCCTATCAGTAAGGCTGAAGAAGCAGAAGTTGAATGGTTCTATGAAGACCTACAAGACCGTTTAGAACTAACTCTCAAAAAACATGTCCTTTTCATTATATGGGACTAGAATGCAAAGCTAGGAAGACAAGAAACCCCTGGAGTAACAGGCAAATTGGCCTTGGAGTACAGAATGAAGCAGGGAAAATGCTAATAGAGTTTTGCCAAGAGAACACACTGGTCATAGGAAATACCCTCTTCCAACAACACAAGAGAGGACTATACACATGAACATCACCAGATGGTCAACACTGAAATCAGATTGATTATATTCTTTGCAGCTAAAGATGGAGAAGCTCCATCAGTCAGCAGAAACAAGATGGGAGCTGACCGTGACTCAGATCATGAACTCCTTATTGCAAAATTCAGACTTAAATTGAACAAAATAGGTAAAACCAATATATCATGCATGTATGACCTAAATCAAACTTCTTATGATTATACAGTGAAAATGGGAAATAGATTTAAGGGATCAGATCTGACAGAGTGCCTGATGAACTATGGGCAGAGGTTTGTGACATTGTACAGGAGGCAAGGATCAAGAAAATCCCCAAGAAAAAGAAATGCAAAAAATCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAACAAAAGGCAAAGGAGAAAGGGAAAATATACCCATTTAAATGAAGAATTCCAAAGAATAGCTAGGAGAGATAAGAAAGCCTTCCTCGGTGATCATTGCAAAGAAATAGAGGAAAACAATAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAGTTACAGATACCAATGGAACATTTCATGCAAAGATGAGCTCAATAAAGGACAGAAATCATATGGACCGAATAGTAGCAGAAGATATTAAGAAGAGGTAGCAAAAATACACAGAAAAACTGTACAAAAAAGATATTCACGGCCCAGAGAATCATGATGATGTGATCACTTACCTAGAGCCAGACATCCTGGAATGTGAATTCAAGTGAGTCTTAGGAAGCATCACTATGATCAAAGCTAGTGGAGCGGATGGAATTCCAGTGGAGCTAATTCAAATTCAAAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCACATTTGGAAAACTCAGCAGTGGCCATGGGACTGGAAAAGGTCAAATTTCATTCCAATCCCAAAGAAAGACAATTCCAAAGAATGCTTAAAAATACCACACAATTGCACTCATCTCACATGCTAGTAAAGTAATGCTCAAAACTCTCCAAGCCAGGCTTCAACATTGCATGAACCATAAACTTTCACATGTTCAGGCTGGTTTTAGAAAAGACAGAGGAATGAGAGATCAATTTCCAACATCTGCTGGATCATCAAAAAAGCAAGGAAGTTCCAGAAAAAGCATCTATTTCTTCTTTATTGACTATGCCAAAATCTTTGACTGTGTGGATCTCAATAAACTGTGGAAAGTTCTGGAAGAGATCGGAATACCAGGCCACCTGACATGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTATGTCAAAGCTGTATATTGTCACCCTGTTTAACTTATATGCAGAGTACATCATGAAAAATGCTGGGCTGGAAGAAGCACAAGCTGGAATTAAGATTTCTGGGAGAGGTATACAGATGATATCACCCTTATGGAAGAAAGTGAAGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGAGAAAAAGTTAGCTGAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGTTCCTATCACTTCATGGCAAATAGATGGGGAAACAGTGGCAGACTTTATTTTTCGGGCTCTAAAATTACTGTAGATGGTGACTGCAGCCATGAAATAGAAAGACACTTACTCCTTGGAAGAAAAGTTATGATCAACCTAGACAGTGTATTAAAAATCAGACATTACTTTGCCACCTAAGGTCCGTCTTGTCAAGGCTATGGTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGTAGTATAAAGGATGCTAAGCACCGAAGAGTTGACGCTTTTGAACTGTGGTGTTGGGGAAGACTCTTGAGAGTCCCTTGGACTGTAAGGAGATCCAACCAGTCCATCCTAAAGAGATCAGTCCTGAATGTTCATTGGAAGGACTGAACTGAAGCTAAAACTTCAATACTTTGGCCACCTGACGTGAAGAGATGACTCATTTGAAAAGACCCTGATGCTAGCTAAGATTGAAGGCTAGAGGAGAAGGGAAAACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGACGTGAGTCTGAGTGAACTCCAGGAGTTGGTAATTGACAGGGAGGCCTGGCATGCTGCAGCCCATGGGGTCACAAAGAGTCAGGCACGACTGAGTGACTGAACTGAAACTGGCAGGATTAATGGCATGATCTTCATTTTTTGAATGCTGAGTTTTACGACAGCTTTTTGACTCTCCTCTTTCACCTTCATCAAGAGGTTCTTTGGTTCCTCTTCACCTTCTGCCATATAAGTGGTATCGTTTGCATATCTGAAGCTGTTAATATTTCATCTGGCCATCTTGGTTTCAGCTTGTGTGTCATCCAGCCTGGCATACTGCTTAATATGCTTAATACATATTGCTTAATGTACTCTGCATAGAAGTCAAAGAAGGAGGGTGAAAAGCACAGGCTAGAATTTCACATGATGTAGTCTGCATAGAAGTTAGATAAACAGGGTGTTATTAATTAAGCAGAACTTAAATAAGGTTGCCATGGTAATCTCTTCAATCTGGAGACATGGCATATTACCCCATCCATCATTCATTCATTCATTAGTGCCCTCAGAACTAAACTACTGCACAATTGGACGCATCTCACATGCTAGTAAAGTAATGCTCAAAATTCTCCAAGAGAGGCTTCAACAGTATGTGAACTGTGAACATCCAGATATGCCATCTGGATTTAGAAATGGGAGAAGAACCAGAGATCCAATTGCAAATATCCACTGAATCATTGAAAAAGCAAGAGAGTTCCAGAAAAAACAACTACTTTTGCTTTATTGACTATGTCAAAGTCTTTTACTGTGTGGATCACAGTAAACTGGAAAATTCTTGAAGAGACCACCTTACCTGCCTCCTGGGAAATCTGTATGCAGGTCAACAAGCAAGTTAGAACTGAACATGGAACAACAGACTGGTTGCAATTTGAGATAGGAGTATAGCAAGGCTGCTTATTTGTATATTGATACCATGATTATTTAACTTATATGCAGAGTACATCATGTGAAATGCCAGGCTGGATGAAGAACAAGCTGGGATTAAGATTGCTGGAAGAAATATCAATAACCTCAGAAATGCAGAGCACACCACCCTTATGGTAGAAAGCAAAGAAGAGCTAAAGAGCCTCTTGATGAACGTGAAAGAGGAAAGTGAAAAACTTGGCTTAAAACTCAACATTCAAAAAACTAAGATGATGGCATGAAGGTCCATTGCTTCATGGCAAATAGATGGGGAAATAATGGAAACAATGAGAGACTTTACTTTTTTGGTCTCCAAAATCACTGCAGATGGTGACTGCAGCCACGAAATTAAAAGATGCTTGCTACTTGAAAGAAAAGCAATGACCAACCTAGAGAGAATATTAAAAACCAGAGACACTACTTTGCCAACAAAGTCCTATATAGTCATACTATGTTTTTTCCAGGAGTCATGTATGGATGTGAGAGTTAGAGGACAAAGAAAGCTGAGCACCAAAGAATTGATGATTTTGAACTGTAGTGTTGGAGGATACTCATGAGAGTCGTTGGACTGCAAGGAGATCCAATCAGTAAATCCTAAAGGAAATCAGTCCTGAATATTTATTGGAAGGATTGATGTTGAAGCTGAAACTCCAATACTGTGGCCACCTGATGCAAAGAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGTTTGAAGGTAGGGAGAGAAGGGGACAACAGAGGATGAGATGGTTAGATTGCATCACTGACTTGATGGACATGAATTTGAGCAAGCTCCAGGAGTTGGTGATGGACAGGGGAGCCTGGCGTGCTGTAGTCCTTTGGGTCACAAATAGTTGGACACAACTGAACAACTGAACTGAACTGGTCTGTGACTTGGAGCAATTTCTTAAATTATCAAAGTCTGTTTCCTTATTTGCAAAATAAGGATCATATACAAAGCTTTGATCTACTGGCATTTGTGTTAAGTAATGAATATTAAAGACATTGGTGATTTCAAAGTGTTTTTTTAAGCTAAATCCATTGCTATTATGGATACTGAAAAATACCATCAGTTGATTAGTACCGCTATATGATACTGCAAGGTACAAATTTGAACAAGGCACATTCCCTGTCTTGTACTTTTAACTATCTAATGCAGTAATATTCCAGGTTCACCTGATTTACTCTCTGCTTACTGCTCTGGCTTATCAGATATCAGTTTTCTTCATGCTGGGTAAAAAAAAAAAAAAAAAAATTCCAATTGAGAACAATCAGAGGGTTTGATTTCAGTCCCTTACCTTGAAATGAATCATTTGATCATTTACAATTCTCCGACCCCATGAAAGCAGCACCCGCACAAAACTCTATTTCCTCAAATACCAGGTAGATGAGAAATATAACACATGCGGGGGGCGGGGGGGGGCGGGGGGTGGGGCCGGGGAACCGGGTGAGGAATGGATCTCACAGAAAGCAAATGTCTCTCCAAATTCACATTTCGGACATCTCTGGTAAGTTCTTAAGTGCAAAGCAGAATCTTTAAAGACTCCCTTGTACAATGTTTGTAATATTGTATATAAATCTCCCAGTTTGTACACCTCATTAATTCAGTCTACATCTATGTAGCAGGAAACTGAAGTAATCAACCAGACAGTGAACACTGGCAACTTTGCCATTGAGAGGCCTGAACTAGTCATCTAAGTTGGTGACATTAGGCAAAGTGATTGGGAAAAAACGCTTCT EMBV3_05781 CGACCAGATGCCCAGCTCCTGGTTAGACCCCAGTCTGGTGGCAGTTCCTGGCAGATTAAA Gene GeneID:282091|PPP1R16B:NM_174824:742_cdna Constitutive 2 NULL GeneID:282091 13 GENE PPP1R16B TIMAP protein phosphatase 1, regulatory (inhibitor) subunit 16B EMBV3_15719 CAGCCACCCCCTCGTTCTGCTGGCCAAGTGAGCTGTGACTGTGTACGACAAGCCAGCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08888 CTCCTGTATGGGAGATTCTGGAGGACCGCTGCAGTGTGGTGAGGGTGGACAGTACAAGCT Gene GeneID:100295004|LOC100295004:XM_002687715:11_cdna Constitutive 0 NULL GeneID:100295004 5 GENE LOC100295004 NULL similar to chymotrypsinogen B1 EMBV3_09253 ACAGAGTTTCGGTCAGGCAAGATGAACACCTTCTATAGATCTGCTGGACAACCACGTGCG Gene BVT0102_243423 + 0 NULL GK000013.2:71326746-71397828 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046153 TCONS_00046151 TCONS_00046152 1 XLOC_026629 NonCoding TCONS_00046152 XLOC_026629 NonCoding NonCoding - 13:71340845-71345102 - TSS33523 1594 1 TCONS_00046152_2 92 0.991217063989962 3 0.626174812030075 0.000196308288620922 0.00029475645144922 0.000290275121390423 0.000135450001232179 0.000644236711568884 1.07720213824201e-05 0.000120708483621573 0.000582565844567707 0.000361341602113118 0 0 0 1.23286792649902e-05 8.66310908305445e-13 1.53895640512767e-05 0 0 0 0.00108756067660451 0.000600035875643567 7.04512797658906e-05 0 2.48119076548149e-12 0 0.000847527903922664 0.000395428959650417 0.000665305539236125 0 0 0 XM_005226715.1 RAB30 PREDICTED: Bos taurus RAB30, member RAS oncogene family (RAB30), 4e-34 150 69.44 0.257214554579674 NR_026655.1 FLJ12825 Homo sapiens uncharacterized LOC440101 (FLJ12825), non-coding RNA. 4e-71 273 75.99 0.259723964868256 0 noncoding 0 0 0 0 -0.0567758496432673 0.668431618439053 -0.0201926855993063 0.77716032606266 GATTACCTCACCATAACCAATCAGAAGAACATCCATGAGCTGAGCCTGCACCCTGAACCCCCTCCCTCATCCTGTCTTTAAAAACCTTTCCCCGAAAGCCACTGGAGAAGTCAGGCCTTTTGAGCACTAGCTGCCTGGACTCCTTACAATAAATGCTCCACGTTCCTTCAGCACCATCAACAGATGTCAGGCGTCACTGGCTTTACTGCACAGCCGCCATCCTGATAGGTGTGAGATGATGTCCGACTGTGGTTTTGACTTGCATTTCCCTGATGATTAGTTACGTTGAGCATCTTTTCACATACCTGTGGGCCATTGTGCCGCATTATTGGCAATGGCAAAGATGCGGAAGCAGCCTGTATGTCCACTGATGAATGAATGAAGAAAATGTGGTATGCAGACCCAAAGGAACGTTACTCAGCTTTTTAAAAAAGGAAAGCCTCCTATATCCAACAACATGCAAGAACTTGGAGGACACCATGCTCAGTGAAAGAAGCTAATTACAGAAGACAAATATTGTGAGATTCTATTTATATGAAGAATCTAAAATAGACAACCGAAGCAGAGTAGAAGGGCGGTTGCCAGCAGCTGGGGTAAGGGAGAAAGAAAGAGCTCCAAGTCAATGAACAGAGTTTCGGTCAGGCAAGATGAACACCTTCTATAGATCTGCTGGACAACCACGTGCGCGTAGATGACAATACTGTATATTCAAAATTGTGTTAAGAGAGCAGATCGCATATAAAGTGTTCTTACCACAGTTTAAAATGGGGAGATCAAAGTATCTAAATAAATATTTCTCTTAAAAAGATAGGAAAATGGCCAATAAGCAGGTGAAAAATGCTCTCATTAGCCGTTAAGGAAATGCAAATCACAAGCACAATGAGCTTCAAAAGCACACTTCACACCCACCAGGATGGCTATACTCAAAACAGGCACATAATACCAAGCACTGGCAATGATGTGGAGAAACTAGAACACTTGTACGTGGTGGGGACCACTGTGAAGTGGCGCAGCCACTCTGTAAAACAGTCTGGTTGTTATTCAAAGGATTGGCCACAGAGTTACAGTATAACTCAGCAATTCCAATCTGGGAAAATATATACTCAAGAAAAATGAAAAGAGAAATGAAAACATATATCCATGTAAGAATTTGCACATGAATATTCGGAGAAACATTATTCATAATAACTAAGAAGTAGAAACAATCCAGATGTCTGTCAACTGATGAATGAATAAATTGTGATATAGTCATAAAAGAGAATATCATTCAATAAAAAGTAATGAAGTACTGATAATACTATGAGATGGTTAAACCTTGAAAACATTATACTCAGTGAAAGAAGGCATTCAAAAGACTGCCTATTATATGATTCCATTTATATGAGATGTCCAGAATAGACAAATCTACAGAGATAAAAGTAAATTAGTGGTTGCTTAGGGCAAGGAGAGTAGGGAGGAATGGGGAGATAACTGCTAATGTGTATAGGATTTCTTTTTGAAGTGATGAAAATGTTCCAAAGTTGATTATGCTGATGATTGCCCAACTCTACGGATATACTAAAAATCACTGAATTGTATATTTTAAATGGTGAAT TCONS_00046149 s 5' 14101 TCONS_00046149 s 5' 15376 EMBV3_31133 CTTGATTCAAGGGACCCTCATGCTACTACAGTCACCTTAAGAGGCCTCTCATTCCTGTGC Gene GeneID:533136|UBE3A:NM_001098462:2_cdna UTR3_Alt 2 NULL GeneID:533136 21 GENE UBE3A NULL ubiquitin protein ligase E3A EMBV3_17412 CCCTGGGAAAAAATCCAACTGATGAGTATCTGGATGCCATGATGAACGAGGCTCCAGGTC Gene GeneID:531505|MYL12A:NM_001015640:140_cdna UTR3_Alt 3 NULL GeneID:531505 24 GENE MYL12A MGC139901 MRCL3 MRLC2 MYL9 myosin, light chain 12A, regulatory, non-sarcomeric EMBV3_33866 ACAGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCAGGCCTGCTGCTCCG Gene BVT0102_290044 + 0 NULL GK000007.2:40311314-40312120 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216611 TCONS_00216612 TCONS_00216609 TCONS_00216610 TCONS_00212931 TCONS_00216608 2 XLOC_131272 XLOC_130288 Coding TCONS_00216608 XLOC_131272 Coding Coding DBN1 7:40311378-40325975 = TSS161511 3310 1 TCONS_00216608_7 660 14 0.774184708139216 0.00330741195359264 0.000794360103456985 0.00106861733295976 0.00166247706419445 0.0013627405149528 4.00121034600161e-05 0.000423250611044216 0.00126756369769971 0.000716537372630747 7.85244324162824e-09 6.05302472471588e-06 5.38217194023229e-06 0.00013897972391116 9.02369024236381e-09 2.22857983687832e-18 0.0345016812409701 0.00632413593356691 0.0172600119838311 0.00052039494609962 8.64689223512471e-08 3.97431495911827e-06 0.00914579331170809 0.00943829759450158 0.00744260890787946 0.00106766300299705 0.000189927740548079 0.000279380070505348 0.00142989583422841 0.0013714440017892 0.00297494889620769 XM_005209175.1 DBN1 PREDICTED: Bos taurus drebrin 1 (DBN1), transcript variant X3, 0.0 4888 100.00 0.818429003021148 NM_004395.3 DBN1 Homo sapiens drebrin 1 (DBN1), transcript variant 1, mRNA. 0.0 3627 87.15 0.883383685800604 TCONS_00216608_7 sp|Q16643|DREB_HUMAN DREB_HUMAN Drebrin; 0.0 992 89.85 0.983333333333333 1 coding 0 0 0 0 -0.0324809838294376 0.808882174270376 -0.0969069309190745 0.307776615130926 CCGGCCGCTGGCTCGCTCGGCTCGCAACGCTGCAGAGGCTCCGAGGCGGCGGCGCGGCGACTCGGTCTTTCCCTCCCTCCTTCTCCGTCCGTCCGTCCGTGCGTCTGTCCGTTCGGCCTCGGTCCGGCCCGCAGCATGGCCGGCGTGAGCTTCAGTGGCCACCGCCTGGAGCTGCTGGCGGCGTACGAAGAAGTGATTCGGGAGGAGAGCGCGGCCGACTGGGCTCTGTACACTTATGAGGATGGCTCAGATGACCTCAAGCTTGCAGCATCAGGAGATGGCGGCTTGCAGGAGCTCTCCGGCCACTTTGAGAACCAGAGGGTGATGTATGGCTTCTGCAGTGTCAAGGACTCCCAGGCTGCTCTGCCAAAATACGTGCTCATCAACTGGGTTGGTGAGGATGTACCTGATGCCCGCAAATGTGCTTGTGCCAGCCACGTGGCTAAGGTGGCCGAGTTCTTCCAGGGCGTTGACGTGATCGTGAATGCCAGTAGCGTGGAAGACATCGACGCGGGCGCCATCGGGCAGCGGCTCTCTAATGGGCTGGCGCGGCTCTCCAGCCCTGTGCTGCACCGACTACGGCTCCGTGAGGACGAGAATGCCGAGCCGGTGGGCACCACCTATCAGAAGACTGATGCGGCTGTGGAGATGAAGCGGATTAACCGCGAGCAGTTCTGGGAGCAGGCCAAGAAGGAGGAAGAACTGAGGAAAGAGGAGGAGCGGAAGAAGGCCCTGGATGAGAGACTCAGATTTGAGCAAGAGCGGATGGAGCAGGAGCGGCAGGAGCAGGAGGAGCGGGAGCGCCGATATCGGGAGCGCGAGCAGCAGATTGAGGAACACAGGAGGAAACAACAGACTTTAGAGGCTGAGGAGGCCAAGAGGCGGTTGAAGGAGCAATCTATCTTTGGTGACCAGCGGGATGAGGAGGAAGAGACCCAGATGAAGAAGTCAGAATCAGAGGTAGAGGAGGCAGCAGCCATTATTGCCCAGCGACCTGATAATCCACGGGAGTTCTTTAAGCAGCAGGAAAGAGTCGCATCGGCCTCTGCAGGCAGCTGCGATGTGCCCTCACCCTTCAACCACCGACCAGGCAGCCACCTGGACAGCCACCGGAGGATGATACCTACCCCTCTCCCTGCCCGGAGCCCCTCTGACTCCAGCACGGCCTCCACCCCTGTTGCTGAGCAGATTGAGCGGGCCCTGGATGAGGTCACGTCCTCACAGCCTCCACCACTGCCGCCGCCACCCCCAGCAGCCCAAGAGACCCAGGAGCCCAGCCTCAGCCTGGATAGTGAAGAGACCAGCAAGGAAGCCAGAGCAGCAGCCCCTCAGGCCAGGGCTGGCCCCCTGGAGGAGTCCCCTCAGGCCTCGGAGCCTCCCGAGGGCCAAGGCAGCCCCATGGAGGAGGACTTGATGTTCGTGGCATCTACAGAGCAGGCAGACCTGGCTGCCTCTCTAGAGCCTGCCATGGCTGGAGCCTCTGCAGCCGACAGCCCAGTAGCTGATGCCATTGAAACCGACACTGCCGTGGCTGACACTGCTGTAGCTAACACCGTCACCCCTGCCGCTGCCAGCCTCATTGACCTTTGGCCAGGCAATGGGGAAGGGGCCTCTGCACCCCAGGCTGAGCCTCGGGCCCCCACACCACCTTCAGGTGCCGAAGTCATGCTGGCGGAGGTGCCCCTGCTGGATGAGGTGGCTCAGGAGCCACTGCTGCCAGCAGGAGAAGGCAGTGCCAATCTTCTCAGTTTTGATGAGCTGCCTGAGCCGCCAGCCACCTTCTGTGACCCAGGGGAGGAAGTAGGAGGGGAGCCCCTGGCTGCCCCCCAGGCTCCAACTCTGCCCTCAGCTCTAGAAGAGCTAGATCAGAAGCTGGAGCCAGAGCTGGAACCAGAGCCCCACCTGCTGACCAATGGCGAGACCACCCAGAAGGAGGGGACCCAGGCCAGTGAGGGGTACTTCAGCCAATCACAGGAGGAGGAGTTTGTCCAATCAGAAGAGCTATGTGCAAAGGCTCCGCCTCCTGTGTTCTACAACAAGCCTCCAGAAATCGACATCACCTGCTGGGATGCAGACCCAGTACCGGAAGAGGAGGAGGGCTTCGAGGGTGGTGACTAGCAGTGGTGCCTGCCCTTAGGCTGCCCTCGCCAGGGCCGCCCACCTGCCCCGTCTCTGGCCAGATGGTCCACAGTGCCTGCACTCGCAGCAGCTCCGCCTGGCACCTACTCTGGATTCTGGCCCTGGCTGGGGACTTGGCCGCATCCCTACCCACAGGGCCCTACTTTTACAGCTTTTCTCTCTTTTTTTTTTTAAAGTTGATAGGAGACTTGTACAGTTGACTGGTTTTCCTCCCGTTGGTAGTTGAGACGCTGTTGCAAATTCCACCCCCTTACCACCCGGTCCAGATTGTAGCTCTTAGTCCTCCCTGCTCACTCACCTGGCCGGGGTGGAGGCCTCACCTTGCTTGGGGCCTGGCGTGGGGGGGAAGTTTTGGTGGGAAAATGTTCCCCCCACCTCTTTTCCTAGTTTTCTGTTTCTTGGAAAAAATATCACTTTGTATTCTCTGTCCAGGGCTTCAGATATTTTGCACGAATTTTAAAACATGGCAATAAATGGCTCGTGGGCTCTGGCTCCCTGGGACACCCCTCCCTACCCTTCTCTTGACCCTTCCCCACCTGGCCCAAAGGAAGAGAAGCAGGCCTAGCTGGGGCCTCTCAGCTTCCCAGCCCTTTCCTGCCCCCTCCTGCTGGGCAGGTCCCAGGCTGGAGGCCCTAGGCGTGATTCAGGTCAGGGCTATGGGTGGCCCCTCTCCATCTCCTCCCTCTTTGCTTGGGTTCCTTTTTCACGTTCAGTAACTGTTTTTTGGAAAGCACAAACTTCTGTAACAGGTCGTGCTCATGTCTGTTAATAAAGAAATCCAGATCCCTTCAGGCCTGCTGCTCCGGGCCTCCAGGGGCTGATCCGTGGTGGGCCGCCTGCCCCGACCCCATTCCCAACTCTTGCTACCTTCAAAGCTGCGAGGGCGCCCTCACCAAGGCCCCAAGGAAAGTGGGGTATGAGGCTCTTGGGGGAACCAACCAAAGGTTTGGAGCAGGCTGACCTCAGCTTTAGCTCTACAGCTTGTTAGTTTTGGGCCGATGAGGCCGGCCACACCTGGCCACCAGAACCTTGGCCGCAAGCAGTGGGTGCCCCCTCCGCTTGTACTAAACCAGATCACACACCTTTATTATCCTCAAAATGTAACAAACGGGGTAAGAAATCCCTCCCTCTCCACCCCACCCCCCCCCCCCCCCCCCGCAGTCCAAGGGAA EMBV3_13579 AGTCACCTGAAGACAACAGAAAAAGTATTAGGTGGACAAGTTACTTTCAAAGAAGAAATG Gene GeneID:509009|SLC35E3:NM_001083654:28_cdna Constitutive 2 NULL GeneID:509009 5 GENE SLC35E3 MGC151827 solute carrier family 35, member E3 EMBV3_43160 TGGAAGCCAGGAGTGGAGCTTGTCCAGGAGGCAACTGGAAGCAAGAGTTGCTGAAATTCA Variant GeneID:619125|LOC619125:XM_002694624:83_cdna 520^664 3 EMBV3_06658 GeneID:619125 17 GENE LOC619125 NULL similar to SEC14p-like protein TAP3 EMBV3_23027 GATCTGTGGAGTGAATGCCTCAGCCCCTCTGACTGGCAAACCACTCTGAGCCTTAATAAA Gene GeneID:514445|UBOX5:NM_001075669:1057_cdna Constitutive 2 NULL GeneID:514445 13 GENE UBOX5 NULL U-box domain containing 5 EMBV3_17036 AGCCTGTCTGCGAGCAAACAACCATTGACGTTTATGAGCCACCCTCATCACAGTACTCTT Variant GeneID:767864|IL10RB:NM_001076975:61_cdna 686^843 2 EMBV3_42979 GeneID:767864 1 GENE IL10RB NULL interleukin 10 receptor, beta EMBV3_17271 TCAGCTTCAGAGAAGGGTGAAGAAAAACTGTAAGAGGATCTGGAGTGCTCTGGGAAGGAG Gene GeneID:513257|TCAP:NM_001014915:124_cdna Constitutive 0 NULL GeneID:513257 19 GENE TCAP NULL titin-cap (telethonin) EMBV3_08115 CCACCCGGAGAAACACACTTTGTAGAAACCTGCAAAAAAGGAGCTTGAGCTGCAGGAACC Gene BVV0102_400059 + 1 EMBV3_04254 GK000001.2:179714-264297 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33086 GACTTTGCAAGTTACTTAACCTCAAGCCTTAGTTATTAAGTCATCTGAGAAACACAGAAC Gene BVT0102_081199 + 0 NULL GK000008.2:48516660-48658280 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09019 GCATGCCTAAAACACAGTACTACAGCAGTCAAATTCTCCTCCACCTGGGATCTCTCATCC Gene GeneID:100139927|LOC100139927:XM_002687792:71_cdna Constitutive 0 NULL GeneID:100139927 5 GENE LOC100139927 NULL similar to bitter taste receptor EMBV3_05008 TAAGCTATGAGTTGAATGGCTCTGCCAAATGTTTTTCGCGCCTCCATGTGGCTTGGACCC Gene GeneID:539596|LOC539596:XR_082696:95_cdna Constitutive 0 NULL GeneID:539596 7 GENE LOC539596 NULL similar to Transforming growth factor-beta induced protein IG-H3 precursor (Beta IG-H3) (Kerato-epithelin) (RGD-containing collagen associated protein) (RGD-CAP) EMBV3_20118 GCAGTGCCTTGAATTTAGACGACAGAGCCTCTGGCACCATGCCAAAAATAGCTTAAAAGG Gene GeneID:540693|AP1S3:NM_001103296:166_cdna Constitutive 2 NULL GeneID:540693 2 GENE AP1S3 MGC157206 adaptor-related protein complex 1, sigma 3 subunit EMBV3_31859 GACGAGAAGATGAGGAAGCAGAATGACTATGCAGAGAAGTGTATCCATCTGAACCGCGGC Gene GeneID:531084|PADI6:XM_002685797:684_cdna Constitutive 0 NULL GeneID:531084 2 GENE PADI6 NULL peptidyl arginine deiminase, type VI EMBV3_34823 CAGATGCCACCACATCTGAGAAAAGTCCAGGTCCATCCAAAGCCACTACAATAGATGCCT Gene GeneID:781903|LOC781903:XM_002687773:112_cdna Constitutive 0 NULL GeneID:781903 5 GENE LOC781903 NULL similar to Uncharacterized protein C12orf60 EMBV3_01488 GGCGGCTCTCGTGCGGGTTAGAGTTCTGGAGACACATATTGACTTTGCCACTCGTAAGAT Gene GeneID:614690|RBP7:XM_002694059:167_cdna Constitutive 0 NULL GeneID:614690 16 GENE RBP7 NULL retinol binding protein 7, cellular EMBV3_38142 AATACAAGACCCAGCATCACCCAACCACCAGTAGCACCCTGTGCAAGACCCCTCATCTAA Gene BVV0102_057156 + 0 NULL GK000028.2:17514824-17675517 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241704 TCONS_00197105 TCONS_00152677 TCONS_00230692 TCONS_00124447 TCONS_00229521 TCONS_00161781 TCONS_00055226 TCONS_00214408 TCONS_00070770 TCONS_00038205 TCONS_00214975 TCONS_00161700 TCONS_00056173 TCONS_00089003 TCONS_00089451 TCONS_00079733 TCONS_00209281 TCONS_00221057 TCONS_00252759 TCONS_00108313 21 XLOC_148368 XLOC_118768 XLOC_092442 XLOC_140182 XLOC_075994 XLOC_139016 XLOC_098667 XLOC_033034 XLOC_130677 XLOC_042548 XLOC_022031 XLOC_130807 XLOC_098587 XLOC_033976 XLOC_053789 XLOC_054235 XLOC_048617 XLOC_127792 XLOC_134373 XLOC_155700 XLOC_064221 Coding TCONS_00161700 XLOC_098587 NonCoding NonCoding - 28:17589350-17590357 - TSS121032 1007 2 TCONS_00161700_2 76 0.999006951340616 1 0 0.000190281586656978 0.000114753769753435 0.00017644165811506 4.1232166764955e-05 0.000544217062675751 6.12752678265567e-05 9.6519546197809e-07 0.00116590948793756 0.000477952860523692 1.02146978656929e-05 2.27327293498735e-06 0 9.61652055105777e-05 0.000234342952051465 2.6796507131744e-05 3.49706842548025e-05 0 0 8.5156296405295e-05 1.0712169971178e-05 2.73469777651748e-05 0 0 0 6.5018904984256e-05 8.11593604271546e-05 0.0001591988429212 0 0 0 XM_005213678.1 ZAR1L PREDICTED: Bos taurus zygote arrest 1-like (ZAR1L), transcript 1e-49 201 73.27 0.304865938430983 NR_033805.1 WAC-AS1 Homo sapiens WAC antisense RNA 1 (head to head) (WAC-AS1), 8e-15 86.0 68.40 0.259185700099305 0 noncoding 0 0 0 0 -1.9082451997144 0.03726510386681 -0.398592333815349 0.00344198761235357 GTGTTTCTCCTTGAGTTTATCCTGTATGGGACTCTTTGCATCTAAAAGATTGACTATGTCCTTTTACATGTTGGGGAAGTTTTCAAATGTAATCTCTTCAAAGTTTTTCACATACTCTTTTTCTCTTCTTCTGGGACCCCTATAATTTAAATGTTGGTGCATTTGATATTGTCCCAGAGGTCTCTGAGACTATCCTCAGCTCTTTTCATTCTTTTTACTTTATTCTGCTCTTCAGAAGTTATTTCCACCATTTTATCTTGCAGCTCATTGATTCATTCTTCTGCTTCAGATATTCTGCTAGTGATTCCTTCTAGAGTATTTTTAATTTCAGTAATTGTGCTGTTTGTATGTTTATTCTTTAATTTTCTAGGTCTTTGTTAATTGATTCTTACATATTCTCCACTCTGTTTTCAAGGGTTTTGATCATCTTTACTATCATTATGCTGAATTCTTTTTCAGGTAGTTTGCCTATTTCCACATCATTCATTTGGACTTCTGTGTTTCTAGTTCACTCCTTCATTTGTGTAATATTTCTCTGCCTTTTCTTTTCTTTTTTTTTTAACTTATTGTGTTTGAGGTCTCCTTTTCCCAGGCTTCAAGGTTGAATTCTTTCTTCCTTTTGGTTTCTGAACTCCTAAGGTTGGTCCAGTGGTTTGTGTAAGCTTCGTATAGGATGAGGTTTGTGCTGAGTTTTTGTTTGTTTGTTTTTCCTCTGATGGACAAGGCTGAGTGAGGTGGTAATCCTGTCTGCTGATGATTGGGTTTGTATTTTTGTTTCATTTGTTGTTTAGATGAGGGGTCTTGCACAGGGTGCTACTGGTGGTTGGGTGATGCTGGGTCTTGTATTCAAGTTGTTTCCTTTCTGTGAGTTCTCATTATTTCATACTCCCTAGTGTTAGTTCTCTGGTAGTCTAGGGTCTTGGAGTCAATGCTCCCACTCCAAAGGCTCAGGGCTTGATCTCTGGTCAGGAACGAAGATTCCACAAGTGGTTTGTTATGGCATTAAG TCONS_00159158 TCONS_00159159 TCONS_00159160 TCONS_00159161 TCONS_00159162 . 5' 85150 TCONS_00159158 TCONS_00159159 TCONS_00159160 TCONS_00159161 TCONS_00159162 . 5' 85150 EMBV3_33265 GTACCGACCAAAATCTAGTTATTGGCATGATCTTGACAGGCTGGACCTGCAAGATGTGGC Gene BVT0102_286335 + 0 NULL GK000004.2:88755271-88777978 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184776 TCONS_00184774 TCONS_00184777 1 XLOC_111427 Coding TCONS_00184774 XLOC_111427 Coding Coding WASL 4:88775409-88856596 j TSS137512 3887 1 TCONS_00184774_2 277 10 0.952245461040081 0.00119284097667093 0.00100873503387163 0.000974620456108752 0.000952810948901562 0.00107163465426869 0.000549824684790568 0.000817224450005276 0.000824309805951577 0.00110255767943783 0.000184159771268316 0.000200911179795488 7.46365265942541e-05 3.02965155608955e-05 0.000152753187644298 1.37379941583227e-13 0.00320868333484781 0.0022723539821335 0.00263500566044617 0.000963127533353428 0.00117962948143298 0.00049005069728192 0.000839917178429232 0.00127307123610326 0.00179351696481967 0.00124475224434557 0.000527145173311948 0.000898824086329782 2.32643995589071e-06 0.000190926920003852 0.000367517362190886 NM_174219.2 WASL Bos taurus Wiskott-Aldrich syndrome-like (WASL), mRNA. 0.0 1984 99.64 0.286853614612812 NM_003941.3 WASL Homo sapiens Wiskott-Aldrich syndrome-like (WASL), mRNA. 0.0 3047 84.65 0.711602778492411 TCONS_00184774_2 sp|Q95107|WASL_BOVIN WASL_BOVIN Neural Wiskott-Aldrich syndrome protein; 0.0 588 99.64 0.992779783393502 2 noncoding 0 0 0 0 -0.0319516362808334 0.878729683577 0.0116414360421886 0.896082600698975 GCCGCCGAAGGAAGGTTGGGGGAGGAGTTGGGAGTTTAGCGCAGTCGCCGGAGTGCGAGGACAACGACCATCCGGCCAGAGCCTACCCCGGCGGGAACGGGGAGCTTCCCTTTCTCACAGCGGCCCGCCGTCGGCTCCTCCTTCCGTGGCCTCCTCCCTGCGCCGGAGGAGCTGCGAGATGCTACGCCTCTGATTCCCCTCCTCCCGCCCCTGTCACCCAGAAGGGGAACGAGCGCTCGCCCACTCGCCGGAGGAGACGGCCCTGGCCTCCCTACCCCGCCGGCGAAACCATGAGCTCCGGCCAGCAGCAGCCGCCGCCGCCGCGGAGGGTCACCAACGTGGGGTCCCTGCTGCTCACCCCGCAGGAGAACGAGTCCCTCTTCACCTTCCTCGGCAAGAAATGTGTGACCATGTCTTCGGCAGTGGTACAGTTATATGCAGCAGATCGGAACTGTATGTGGTCAAAGAAGTGCAGTGGTGTTGCTTGTCTTGTTAAGGACAATCCACAGAGATCTTATTTTTTAAGAATATTTGATATCAAGGATGGGAAACTATTGTGGGAACAAGAGCTATACAATAACTTTGTATATAATAGTCCTAGAGGATATTTTCATACCTTTGCTGGAGATACCTGTCAAGTTGCTCTTAATTTTGCCAATGAAGAAGAAGCAAAAAAATTCCGAAAAGCAGTTACAGACTTGTTGGGACGACGACAAAGGAAATCTGAGAAAAGACGAGACCCCCCAAATGGTCCTAATCTACCCATGGCAACAGTTGACATAAAAAATCCAGAAATTACAACAAATAGATTTTATGGTCCGCAAATCAACAACATCTCCCATACCAAAGAAAAGAAAAAAGGAAAAGCTAAAAAGAAGAGGTTAACTAAGGCAGATATTGGAACACCAAGCAATTTCCAACACATTGGACATGTGGGTTGGGATCCGAATACTGGCTTTGATCTGAATAATTTGGATCCAGAATTGAAGAATCTTTTTGATATGTGTGGAATCTCAGAGGCACAACTTAAAGACAGAGAAACATCAAAAGTTATATATGACTTCATTGAAAAAACAGGAGGTGTTGAAGCTGTTAAAAATGAACTGCGAAGGCAAGGTAACTGATGCCCCAGAGTCTACACCACCAGCACCTGCACCCACTTCAGGAATTGTAGGTGCATTAATGGAAGTGATGCAGAAGAGGAGCAAAGCCATTCATTCTTCAGACGAAGATGAGGATGAAGATGATGATGAAGATTTTGAGGATGATGATGAATGGGAAGACTGATCTATATATTATATATATATATTTTTAAGGTGAAATACTAAACACTACTTTCTGTCTATGGATTCTGTAAAATTATCATGTAAATGTTCTACCAATTTGCTGTATATTTTTGTTGCCTTTTTGCTTTTTTTTTATTAATCTGTGCAATACCTCATTTAATCTGTAAGGGTTTGTCATAATCCTCTGCAAAGCTACTCCCTGTGACTGTGTGCACGTTTACACCAGGATGCTCACTTGATTTGTGAGTGTTTTTCATTCCATCAACAAGGGAGTTTAAATATTATATGTGAGACTGACAAAAACCTTAATGTAATTTAGTTATAATGCCAGAAGGAAAACACTATTTTCATACCCTACTTTTTCTGTACCTAAATTTTCTTATTAAAATCTAGTATAGCACTACATTCTTTTTTAAGTGATGCAAACCTTAGTTTATTTAGCCCCTTCTTTTTGAACACATGCCACATGAATGTTGAAACTGATACATTGCACAGTTCTCTAGACTTCACTACACTGATGCAAGTTCTCAAATTTTAGCAATATGCTCTACGTAAAATCACTACAGAGATGCTAGTTGGGAAAATGAGTAACACATCTCTTACAGCAGTATTGCCTGTTGTTGTACAGATCTGGTATTTGGAGGCTGGAATCATAAGGAGCCCTTGCATCCCTAATACTTGACTGAGGTTATTTTTGTGTTATAGCAAATGTGGCAGGCTCTTTTTGGCAAAAATTTTTAAAAAGTATTTTTGGTATTATTCTGAAAGAAAAGATGTTAAAGTTTAGGGGATCTTAGATATAATTCCATACTACATGAACTGAAGGAGGCTATACATTGTGGTGTTTGATTAATTTACTATAAAAAATTCAGAACATAAAAATGAGGTAGGATTAAGTATTTTTATTTTGCAGTCTGTATGGATTGAGATAATTCAGAAATACCAACCATAGAAATCTTAACTAGTTGGCTAAGGTATACCCTGTAATAGTGAAACTATAATATGCTGGGTGTTTTTTTTTTAATTTTGATAATTTCTCAAGGTTTTTGTCAAATGTCAGGTGAAGGGTTACCTTTTTCTTAAAAGATTGATGGTCCCAATGTCAAATTTCTTGAAACACAAAACCCAATGATAGATTTTTAAGAAGCAAAAATAAAACTTTACAACCTGCATATCTGTTATATATGCTACATGATGTGTTAAAATTAGGGTTTCCTTGCCTCTCTACAGTACACTAGTCTGCCTAAGGGTGATTGTTTCATATATATAGCATTAATTATCATACCTGCCTACTTTAAATTTTAGGTAGAAAAATGATCTGATTTAAATAAATACAGACACCTATTTTTCTCACATTGAGTCATATACAGAATGTAGTTCCAAATGTATTTCATTACTATAGTCACAATATCTGACTAAAAATTAAGCTCTCTATAATTGTACCGACCAAAATCTAGTTATTGGCATGATCTTGACAGGCTGGACCTGCAAGATGTGGCTTGAATTTTAACCAGTTATCACATAATCTCTAGTGATCATGCATCTAGTTATCATGAGAAATAATTTAAAAGGTTTTGTTGCTGAAAGCAGTAAGTGGTGCAGTACAATAGTTAAGTTATTCAGAGACTGTTACCTACCTTGCAGGAATAATTTAAGCTCATGGGAAAGATTCTAGACTTTTTGTTTCTTGCAAAAAAAACAGTGCCCTCTGCTGCTAAAAACCTTTTTCTGCTTACTTTTTTTTTTTTTATTGTGGCTTAATTTCTGTGGGTCTGGTGTGGATGAGGCTGGACAACAACAACCAATAAAATTAGGAATTTGTGCAAATGGTAAATAGAACGTTTTAATTATTTTAAATAATATTGATCATTTTCCTTTTTGTTTCTTTTAGACATTATATAAATTTTTTGCAATATCTTGGAAATGTCTTTAATGCCAATTTAAGATATCTGTTCACTTTGGGGCAAGGAATGCAGGGTTTTCTAGCTAACTTCGTTATGATAAAGATTTATCAGGAGCTGCTCTGAGCAGAGGATATCAAATCTTCGAATTGGAAACACAATTCTAAACATGTGAGATGGGTATAAAATTTGCCAATGGTAATTGAGTTTATTCTTTCTTCTTAAAGGACAAAAAAAAAAAGACTTTTGTTGTTGCACAAAGTCTAAATTAATATTGGTTGAAACACAGCAGCTGTGGGATTCAGTCCAGGCATGAAGACTAAATCCACTGTAGATGTAAAGGTTGCATGTTTTCAGTCCTCCACCGCCTCGCACCGTGGACAGCACTATACCTGTGCATCGTCTGAGAGCTTCCCACATGCACTCCAGCTAAATGATTGTCTGGTAGCCTTCGCGTTTAACAAACTAGCATGAGGCTTTTTATATCTAAATGCTACGTGATAGACAATTTCAGCTAGCCACATATTGTATGTATGAGATTCATAAAGACTTTCAATCATTCATTTCCATTTATCAACTGAAATTTTGTTTAGTATGTGAATTTTTTTTTTTTTTTTTTGAAATGTATAGTGAATAGGATGTTGCACTGGTGGCAATTCATCATGGAGCATAATAAAATTAATTTGACCCAAATAGTATA EMBV3_14867 GGAAGAAACTGCCTCCATTCCGTGGTTTGAGCTCCTACTATTTCAAGCTTCCATCGGAGG Gene BVV0102_425120 - 1 EMBV3_09017 GK000023.2:24547782-24588031 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21112 GCAGGTGATAAGGCAAACTGTTGGTGGCTTAGACATCACCCCCAAGTGCTTTCCATGAAG Gene GeneID:506343|ATIC:NM_001075254:19_cdna Constitutive 0 NULL GeneID:506343 2 GENE ATIC MGC140811 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase EMBV3_02227 TTTGAAATGACGACAGCGCCCCTAAGCCAAGACGAGAGCTGTTAAGGACTCGGTTTCGTT Gene BVT0101_003484 + 0 NULL GK000027.2:41056081-41677651 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35684 AGCCATGCAGGGAGGATCGGGAACAACATTACTTTGGCACCTCTAGAAGACCTGAGACTC Gene GeneID:100337217|LOC100337217:XM_002696928:471_cdna Constitutive 0 NULL GeneID:100337217 22 GENE LOC100337217 NULL hypothetical protein LOC100337217 EMBV3_34779 GAACGTCATATGATTTCTTCATGGGAACAACCAGTGAGAACCATCCAGAGAAGCCTCACT Variant GeneID:540456|C24H18ORF10:NM_001102244:115_cdna 202^418 3 EMBV3_02546 GeneID:540456 24 GENE C24H18ORF10 MGC152138 chromosome 18 open reading frame 10 ortholog EMBV3_13467 CCAGTGAAGCCACTGACACGAGTGAGGGAGGGCTGTGGAGAACACCTTTCAGTTTTATCT Gene GeneID:520730|WWC1:XM_002689365:22_cdna UTR3_Alt 2 NULL GeneID:520730 7 GENE WWC1 NULL WW and C2 domain containing 1 EMBV3_15012 CTCCCTAGACATTGCCCTGTGGGGGAGGGGTCAGTTTGCTCTCAGTCTGTGACTGTCTGA Gene GeneID:519777|SUV420H2:XM_002695387:241_cdna Constitutive 0 NULL GeneID:519777 18 GENE SUV420H2 NULL suppressor of variegation 4-20 homolog 2 (Drosophila) EMBV3_04489 TGGCCCAGAATGTGAAGCCGAGATTCTTGAAAGGAGTTCCCTTTAGGGCTCCTGGGATGT Gene BVV0102_094286 + 0 NULL GK000016.2:64650152-64774599 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20855 TTCCTCCCTCACCTGCTCCCTTTTGGTCGTAGCGCTGCTCTTCCTTGCGTCGTTGCCTCT Gene GeneID:100139472|LOC100139472:XM_002686072:327_cdna Constitutive 0 NULL GeneID:100139472 3 GENE LOC100139472 NULL hypothetical protein LOC100139472 EMBV3_14541 TGAAGATATCGAGCCCGGGTCAAATGAAAGCCCAGGAAGTTGAAAGAACCCCTCCGGCAA Gene GeneID:514005|PPM1D:XM_002695613:312_cdna Constitutive 0 NULL GeneID:514005 19 GENE PPM1D NULL protein phosphatase 1D magnesium-dependent, delta isoform EMBV3_12013 GCCGCGGTGCAGCCGCTGCAGAGCCTTCAGCAGCCTCTCATGATTCAGATTCTGGCCATG Variant GeneID:510412|GOLGA5:NM_001098007:202_cdna 113^689 1 EMBV3_06588 GeneID:510412 21 GENE GOLGA5 NULL golgi autoantigen, golgin subfamily a, 5 EMBV3_30811 CAGTCTGCCAAGAGTACAGGTCAGTGGCTTGGGATGGTGGAGAACTTCAACCAGGTACAA Gene GeneID:529311|LOC529311:XM_002685503:20_cdna Constitutive 0 NULL GeneID:529311 2 GENE LOC529311 NULL similar to Biogenesis of lysosome-related organelles complex-1 subunit 1 (BLOC-1 subunit 1) (GCN5-like protein 1) (RT14 protein) EMBV3_00840 CAGGTATTGTTGCAGAAGGGCGGAGCGACCTCTATGTCTCAGATGCATTCCACAAGGCAT Gene GeneID:540261|SERPINC1:NM_001034698:181_cdna Constitutive 0 NULL GeneID:540261 16 GENE SERPINC1 AT3 MGC127984 serpin peptidase inhibitor, clade C (antithrombin), member 1 EMBV3_37059 AATGGAGAGGGGTAGACTTCTTTCCCATCCCCTTCCACCTGGGCAGGAGCCAGCACAGTC Gene BVT0101_044615 + 1 EMBV3_17857 GK000018.2:35124821-35136593 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33845 CAGTTGCATCTAGAACGCCAGTGGAACATGTGGATCCCAGGGTTTGGCTCTGAAGAAATC Gene GeneID:614227|TAF12:NM_001034754:266_cdna Constitutive 0 NULL GeneID:614227 2 GENE TAF12 MGC127146 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa EMBV3_26108 TCTTTGAAATCAAGAAGCCCCCAGCTTCAGGGTGGAGTTCACAGTGGGAGACAAGCCTGT Variant GeneID:538501|UNC119:NM_001034645:145_cdna 375^477 1 EMBV3_06573 GeneID:538501 19 GENE UNC119 MGC128474 unc-119 homolog (C. elegans) EMBV3_36415 CATGAGATTGATCACTTCTTTTGTGAGGCCCCCTCTCTGGTGCGTTTGGCTTGTGCTGAC Gene GeneID:787816|LOC787816:XM_002689087:8_cdna Constitutive 0 NULL GeneID:787816 7 GENE LOC787816 NULL similar to olfactory receptor Olfr314 EMBV3_16844 CTCCACACCTGTGCTGACTCAGTGCTCACTATTCATGTTCCCCAGTAATGAGCCAGCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17110 GGCAGAAGGACAGGATCAGACAGATGCAAGAAATACATCGACATGCCCTAAACATGCGGC Gene GeneID:538695|KLHL11:XM_002695991:369_cdna Constitutive 0 NULL GeneID:538695 19 GENE KLHL11 NULL kelch-like 11 (Drosophila) EMBV3_43321 TGGAAGACTATGATCCTACTGTGGAGAATAGATGAGTACAGCATTCTGCCCTATTCATTC Variant GeneID:353300|RHEBL1:NM_181668:20_cdna 144^211 2 EMBV3_38512 GeneID:353300 5 GENE RHEBL1 NULL Ras homolog enriched in brain like 1 EMBV3_31081 CAGATGACAAAGATGTGCTTCGAGATGTGTGGTTTGGACGAATTCCAACTTGCTTCACCC Gene GeneID:532686|ATG5:NM_001034579:21_cdna Constitutive 1 NULL GeneID:532686 9 GENE ATG5 MGC127005 ATG5 autophagy related 5 homolog (S. cerevisiae) EMBV3_25079 TCACATCCACTCCCGGAGAAACCGAGTAGCCAAGCTGTAGCCCTTCTTAGAGAGAACATT Gene GeneID:537445|AQR:NM_001098091:76_cdna Constitutive 0 NULL GeneID:537445 10 GENE AQR MGC139034 aquarius homolog (mouse) EMBV3_00420 TGGAGTGCATCGGATCCTTTCTATACCAACGACAGGAGCATCTTGACCCTCTCCACAATG Gene GeneID:614392|ATP11B:XM_002684898:157_cdna Constitutive 0 NULL GeneID:614392 1 GENE ATP11B NULL ATPase, class VI, type 11B EMBV3_24992 AGTTCCCTGCGGACATGTAACTTTGCCATCAGTTTTGATGTGGAAACACTGTGATGTATA Gene GeneID:506433|WNK1:XM_002687906:59_cdna Constitutive 0 NULL GeneID:506433 5 GENE WNK1 NULL WNK lysine deficient protein kinase 1 EMBV3_05833 TCTGCCCCAGACTTCTTTAGTTGGGTCTGTGTCCACTTTTTCTCAAGTATCCCCAACCCC Gene GeneID:513782|PRPF40B:XM_002687284:175_cdna Constitutive 0 NULL GeneID:513782 5 GENE PRPF40B NULL PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) EMBV3_42395 TGGGGTAAAAAAGCCCTACTGTGCTTTGAAAGAATATCAAGTATAAGCCCAGTTCTGGAG Gene BVT0102_146115 + 1 EMBV3_00609 GK000002.2:39361502-39765200 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105108 TCONS_00105104 TCONS_00105107 TCONS_00105102 TCONS_00105106 TCONS_00105105 TCONS_00105103 TCONS_00105101 TCONS_00105109 1 XLOC_062505 Coding TCONS_00105101 XLOC_062505 Coding Coding GPD2 2:39762688-39780629 j TSS77653 4710 1 TCONS_00105101_2 285 9 0.737959866220736 0.000335090569312528 4.01334690652618e-07 2.12573276118944e-08 0.000469867627190034 1.05738277137099e-09 4.1217842926288e-05 1.42990913297059e-05 0.000568322574573381 4.79005490258021e-05 1.44251912344736e-05 2.35164257119933e-06 1.57255752784196e-05 3.27700401146024e-05 3.23600333347951e-05 6.23680319480717e-05 0.00111449546948522 0.00167961102456795 2.20447858370903e-05 4.70203426132799e-09 0.000867481076519473 5.42216279107512e-05 7.79812589247892e-09 1.82778934846675e-10 0.00179875777286015 2.2362677422524e-08 2.24584603204762e-05 1.30216207185099e-09 1.83409770290495e-05 6.91674570619748e-06 0.000127317106682453 XM_005202413.1 GPD2 PREDICTED: Bos taurus glycerol-3-phosphate dehydrogenase 2 (mitochondrial) (GPD2), transcript variant X1, mRNA. 0.0 8010 99.82 0.947983014861996 XM_005246469.1 GPD2 PREDICTED: Homo sapiens glycerol-3-phosphate dehydrogenase 2 (mitochondrial) (GPD2), transcript variant X1, mRNA. 0.0 4015 79.10 0.964968152866242 TCONS_00105101_2 sp|A6QLU1|GPDM_BOVIN GPDM_BOVIN Glycerol-3-phosphate dehydrogenase, mitochondrial; 0.0 588 100.00 0.996491228070175 4 coding 0 0 0 0 0.0291221650863961 0.84535301224798 -0.033137220680762 0.638199267942174 TTATACCCACAGCCCTGACTGGTCACTACTTAATTTAGATGGTAGAGAGTGAGAAGAGGGGATGTCCTGGCTGCGTGGAGCGGTATTCGCCCCCTTGTGACAGATCCCAAGTCTGCAGACACGAAGTCCATCTCCCGAAACCATGTCGTGGACATCAGCGAGAGTGGCCTTATCACCATAGCAGGTGGAAAGTGGACAACCTATCGATCTATGGCAGAAGATACCATAAATGCCGCAGTCAAGGCACACAATTTGAAAGCAGGACCAAGTAGAACAGTTGGGCTTTTCCTTCAGGGGGGCAAAGACTGGAGCCCCACACTCTACATCAGGCTCGTCCAGGACTATGGACTTGAAAGTGAGGTGGCCCAGCATCTTGCCGCCACCTATGGTGATAAGGCTTTTGAGGTGGCCAAGATGGCAAGTGTGACGGGAAAGCGGTGGCCCATTGTTGGGGTGCGTCTTGTGTCGGAATTTCCATACATTGAAGCAGAGGTGAAATACGGGATTAAGGAGTATGCTTGTACCGCTGTGGATATGATTTCACGTCGTACTCGCCTGGCCTTCCTAAATGTGCAGGCGGCAGAGGAGGCCCTACCTAGGATTGTTGAATTGATGGGCCGAGAATTGAATTGGGATGATTCTAAAAAAGAGGAAGAACTTGAAACAGCCAGGAAGTTTCTATATTATGAAATGGGCTATAAATCTCGATCAGAACAGTTAACAGATCGCTCTGAAATTAGCCTACTGCCTTCAGACATTGACAGGTACAAGAAGAGATTTCATAAATTCGATGCAGACCAGAAAGGCTTTATTACCATTGTTGATGTTCAACGTGTATTAGAGAGTATCGGCGTCCAAATGGATGAAAATACGCTACATGAAATTCTGAATGAAGTAGATTTGAATAAAAATGGACAGGTTGAACTCAATGAATTTTTGCAGCTGATGAGTGCTATTCAAAAAGGAAGGGTGTCTGGAAGCCGGCTCGCTATACTCATGAAAACTGCCGAAGAAAATCTTGATAGAAGAGTTCCCATCCCTGTGGACCGAAGTTGTGGAGGATTGTGAGTCTGAGCAGTGAATCCACAGCCGACAAACATAGGAACAACAAATCATCATGTAACAAACCAGAGAGGACCGACACCACTCCAAAACAGTAGACATGGATAGCTGCCTTTTTGTAACACTGGGAAACATTCCAAAGCTTTAGGATGTCGATGTAGACCCTTTATTGGTATTTGCCATTCAGTCTAGCTTCTTAAAAGTGTATTTTATCATCTTTTCTCATTTTCAGTGCACACTGATTTAATGTTTTGCTTTCATTTTGTGATCTGTTAGACTGGACATACTCCCTTTTTGTTTATTCATTTATTCTAAGTCAATTTGAGAGAATATTTTGGCAAAAATTGAAACGAGAAGCTGGAAGCATTTTGTGAGATGCACAAACCTCTGGACATTAAGCTTGTTGATAGTATTTGTTCTTAAAAGAAATGGAGTGGGACCTATTAAAACAATAGCATTTCTGGAGACCTCTCAGCCCCCTTCTTCCTCCAGCTTGTCTGCTTTCTTTATCCAGACTTTATGTCTAAGCATGACTGGTAAAACTGGAGAGGGAAAAAAAGTTTAGATCTGGTTATAAGAGCAAGTCTCAAAGAGAATCTCTGAAAGCTTCCAGAATCACAGGTACGAGATATAAGGATAGCATTGACATTTGCTGGGAGTTACCGTGATAGTTTCATCTCAGCAGTTCAATTTCCCCCCCAGTCACTGCTAGTTTTTCTTTTGACTATTACAGTTGCCAGGAAGATCCCTGCTTTTCTTATTTTAAAACCAGGATTTAAGTGGCAAGTTGGATACAGTGGGATGGGACTAGATTTCTCAAATTTTTACAGTTGTAATAAATTGAAGGATTAAAAAACCTGTGTTCATATAGCCACATATATAGCACAGTTTTCAATTCTCAAATCCTAGGAGTTGGAGCATGTGATACCATCGAACATGGCCTATTTTGCTTAGGTTACTGTATCAGTTGGAGGGAATATTTATAAACAGATAGTAAAAGAGAATAGAAATAGTCTATTAGTTAACTTTAATTATAATTATTTGTAAAAAGGCACACAATTACAATGTTCATGGTCATTTTAATTGCTTAAAGCCTTTCTCCTTCTGTACTAAATGGAAAAGTTCTCAACCAAAAAGAAAAAGAAAACCATACTCGACTCACACTCACACATGTCCACCATCACACACATACACAGTCACAGAAAGACAAAACAAAAAGATCAATCTGCTCAGAATTTAGTAAATACATAATATACTGAATTTAAAGGGCCCATTTGGCATGCTTTTGTAATACTTTGGTGGCATTTTAGCCAGTTGTCTAAATTTGTCTTCTTCGTGCTTCCTCTTGTGAAGTTAACTACCTGCTTCTTTTGATTTTTAAGAGCACGTTGTGTATAAAATAGGAAACGTGACCCTTTTTTAATGTCAGGTTTTCATTGTGCAGACTTAATTTTTCAAACTGGTACATAAAACACTTTTGTGCTGTTATTTCTATATATGTCAACATTGTAGAATATCTTTATGTCTCATTCGAGTTGGGCATGAGCCTGTCTGTCATAATATACACACTGGAGGTTAGCTCACCTAAGCCCCCACCCTCACCTCGGAAACAGATAAGGTAGCACGGTAACTCATTTTGCTTTTAAAATGAAGTTTAGACTTGCCATTTCCTTAAGGAAAACCTAAAACAGAGCAAGTGAGGCTCCCAAGTATCACTGTGAACTTTTTCTTTTTAAGGTGTGATTTTTTTTTTTTTTTTGCACTGGTTTCATTTCCTTTTTTTTTTTTTTTTAAATAATAGACGCATGTGGTTTTGTAGTTTTGTTTTTCTATCAAGATAGTAATTTCACTGTTTAGAGCCCAGCGACCCTTAATAGAAGAGCTGTCCTTTAAAACATCAGAGATGATGTACCACAGTATTATACATTTGTGCTCTCTCTCTTTCTCTTCATTTCTAGTTAAATCAAGATAACGATGGCTTGTATCCCCCCTGAATCCATTACAGTAGGGATCGGGCTTATGACCTGAGTGGCCTGGGCAGAACTGTATTTGAAAAGAGGCCTTGTTTGTGCACGCTTTGCTTTGAGTGAAGTTCCTTTAAGGACAAAGAAAAGCACACTTTTCTTCCTTTGAGCGTATCTGCCTTTGCTTAAAACCTGCTAATTCTAAAACATACGCTCCTTCACCAATCCCAGAGTCTCGTCTTGGAAATGAGCTGGTTCCAAGTCTTTACTGTGAATAAAGCACCCCCGCATTTTGTATAAAGTTCTTAATTAAACCTGTGCAGCTTCTTTACCTGATTTCAGAAAAGGAGAGAAGAAATGGGGGGTGGGGTGTAAGTGTGATTCAAAATCTATTCCAAGCGCCAAAAGAATTTTTTTTCTTTTTTGTATAAATATGGTATTAGCTGATTCTGTTGGGCTGGGTGTGGGGTGTGTGGAAGACTGTCTTTTGTCATCAAGTGATTTGTTTAAAGAGCCTTTAATGGGATTCAGGTGAAGGTACCCCCATCTGTGGTGGAGAGCTGAATGCTCCCTTCAGTAGCCCTTCGCACAGTTATAACAAGAGTGGAAATGCCAGATTATTTGTTAAGCCAAGGTTGTCTGCCTCATTGCCGTCATGCTGTTTGCAATATTCTTGCTTTCAATCAGTTTAACTTTAGGATTTCCACTACTAAATGCATGCTCCCTATTCTGCTTTAGTTTCTAGCTTTGTATTGTCTTTTTTCAAAGTATGTAGTTTGCTCTTTTATACAACAACAAAATTTCATTCTTTTACTGAACTGTAAGAATGATCATTGATCTTATTTCCCTTTTTTATGTATTTGTAAAGATTTTTGGCATATGAATGTAATAACATTGAAGTCAGTGACACTAATACCTTGCACTGTTTTGCATTATGTCTACCCTTTATATGGGGTAAAAAAGCCCTACTGTGCTTTGAAAGAATATCAAGTATAAGCCCAGTTCTGGAGTCGATATACACACTGCATGTTTTCATATATGGCATTTTTTATGTATTGTGTTGGGTTATTGTTCTAGATTGGACTGTTAAATGCTATGTTTGAGGCTGGGTTGTCATTTTTATAACTGTCTTGGTGTTTTATCGCCATTATTTATTACTTTTGATATACAGAATGAGCTGCATGCATTTATAGAGCAATAAGAGGATGTATTTAATGTGCCTTGTTTTTAACTGAATAAGAACTGAAAGCATGAATCAATAAAGCTGATTAAAATGGTCCATTTACTGGCATGTTGATGTACCTTGAAGTCAGAGAAATAACTTTGATGACTTGTAGTTTAAAAAAAAGTTTGGAAATATTTTCACAAACTGTATTTTTAACTGCATTCACACATTAATACTTTTTGCTTGCAATTTTGTAATTTTATCTCAAAAGTAAATCCCTGCATAGACTGATGTAATTTTATGAGACTGCCAGATTTATTTGTATTAATTTGTTGCTGGAACCTTTAGGGCATGACTTCTGTATTTGTGCAATCCTATTCTAAAATTACATGCATCCTGTTAGGTCTGTTGAATTCTTTTTTTCCTTTCTTTTTTTTTCCTTTTGTCAACCAGAGCCTTTTAGCCTGAGCATTCCCAGGCACACTGATGAATTTTATCATAACCAAAATCAATAGAAAT EMBV3_23476 CTCTTAGTAGTCACAGTGTGAAGGGGGTCTAGAAAATAAGCCTTTGGGAGGAAACAGAGC Gene BVT0102_310055 + 0 NULL GK000011.2:70953342-70961029 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028260 TCONS_00028259 TCONS_00028261 TCONS_00028263 TCONS_00028262 1 XLOC_015438 Coding TCONS_00028263 XLOC_015438 Coding Coding PPP1CB 11:70959336-70997615 j TSS19868 3268 1 TCONS_00028263_4 299 9 0.914859710538691 0.00131535337701884 0.00206329919475384 0.00057068803935095 0.000438143296852633 0.000624700020965636 0.000319848566024825 0.000780433347959362 0.000674599911250723 0.000755332067501709 6.27190133576322e-05 2.09892521037666e-05 3.36648438062242e-05 9.74268526096862e-05 0.000303856596090379 0.000450149807284768 1.31847256620346e-14 2.46034533415881e-08 0.00728953462515872 0.000177342981829487 2.89466836293317e-28 0.000200045855628012 0.00341824682987599 0.00143088948250571 0.00159582755171277 9.29239594764599e-11 2.82128892703639e-17 0.000113623552662228 0.000298039106725459 0.000113229425129028 2.16335705074733e-32 NM_001034653.1 PPP1CB Bos taurus protein phosphatase 1, catalytic subunit, beta isozyme (PPP1CB), mRNA. 0.0 1914 100.00 0.324357405140759 NM_002709.2 PPP1CB Homo sapiens protein phosphatase 1, catalytic subunit, beta isozyme (PPP1CB), transcript variant 1, mRNA. 0.0 1739 96.00 0.327723378212974 TCONS_00028263_4 sp|Q3SWW9|PP1B_BOVIN PP1B_BOVIN Serine/threonine-protein phosphatase PP1-beta catalytic subunit; 0.0 622 100.00 0.996655518394649 1 coding 0 1 1 1 1.87420198778544 0.0285826213905477 -0.33236958622333 0.000577265676086173 GTGCGCCTGCGCGGGGGGCTGCGTGGCGCGGTGGCGGGGCAGGGCGGTGTGGAGTGAGTGGCGCTGCGGGTGGGGCCGTCGGCGGCGCTGGTGACGAGGATGTCGTCCAGGAAAGATTGTACAGATGACTGAAGCAGAAGTTCGGGGCTTATGTATCAAGTCTCGGGAGATCTTTCTCAGCCAGCCTATTCTTTTGGAATTGGAAGCACCACTGAAAATCTGTGGAGATATTCATGGACAGTATACAGATTTACTGCGATTATTTGAATATGGGGGTTTCCCCCCAGAAGCCAACTATCTTTTCTTAGGAGATTATGTGGACAGAGGAAAGCAGTCTTTGGAAACAATCTGCTTGCTATTGGCTTATAAAATCAAATACCCAGAAAACTTCTTTCTCTTAAGAGGAAACCATGAGTGTGCTAGCATCAATCGCATTTATGGATTCTATGATGAATGCAAACGAAGATTTAATATTAAGTTGTGGAAGACCTTCACTGATTGTTTCAACTGTCTGCCTATAGCTGCCATTGTGGATGAGAAGATCTTCTGTTGTCATGGAGGACTGTCACCAGACCTGCAATCTATGGAGCAGATACGGAGAATTATGAGACCCACTGATGTCCCTGATACAGGTTTGCTCTGTGATTTGCTGTGGTCTGACCCAGATAAGGATGTGCAAGGGTGGGGAGAAAATGATCGTGGTGTTTCCTTCACTTTTGGAGCTGATGTAGTCAGTAAATTTCTGAATCGTCATGATTTAGACTTGATTTGTCGAGCTCATCAGGTTGTGGAAGATGGATATGAATTCTTTGCTAAGCGACAACTGGTAACCCTGTTTTCAGCCCCAAATTACTGTGGCGAGTTTGATAATGCTGGTGGAATGATGAGTGTGGATGAAACTTTGATGTGTTCATTTCAGATTTTGAAACCATCTGAAAAGAAAGCTAAGTACCAATATGGTGGACTGAATTCAGGACGTCCTGTCACTCCACCTCGAACAGCTAATCCACCGAAGAAAAGGTGAAGAAAGGAACTCTGTAAAGAAACCATCAGATTTGTTAAGGACATACTTCATAATCTTTAAGTGTGCACTGTAAAACCATCCAGCCATTTGACACCCTTTATGATGTCACACCTTTAACTTAAGGAGACGGTATTAACAAATGACAGGAGTAGAAGAGTCAACATAAAGAATTTAGGAGAACTTACAGGACACCGATTTGTAATTCTTTGGGTGCAACACTTTTGGATGTGATTCTAAAAGCTATTATTGAGCATTGTCAAATTTGTAAGCTTCATAGGGATGGACATCGTATTTATAAATGCCCTCCTATAAGTGCTACCATAGATGTGAAATTCTTGACCTTAATATCGTCTTTGAAAATGTAAATTGAGAATTCTATTAACTTAAATCTTAAGAATTGGCGTATTGTATTACTGCAGGAGATTTGATTTTCAGCGCAGTGCAAAGTTCAATCAAATGCATATGTCTTTTTCTTTTCTAATTCCATTTTGTTTTAAAGCACATTTTAAATGTAGTTTTCTCATTAGTAAAAGTTGTCTAATTGATATGAAGCCTGACTGGTTATTTTAGTCCTTGTTTTTCCTTTACAGTAAAACATGTAAACATTTTATTCAAATAGATTTTTAATATCTTTCATGATGAATTGGTTCTTTTTAAAAATTGTTCATATACTGCTTATGATATATTAGGTCAAACAGGCTTTTACCTAATGTGATTTTAATATCTTTCCAACTGAAGAGTAAGTTGAACAATTTTTAATAGAATTTTAGCTGTACTCTTAGTAGTCACAGTGTGAAGGGGGTCTAGAAAATAAGCCTTTGGGAGGAAACAGAGCAGTCTTTTATTAATCTTAGTCAAACACATTAATTTGAATCCTCTGTACTGAGTTTTTATAATAATTTAGTCAGGTTAATACTGAATAGTCACTAATTAAGCAATTTAATATTGGTCATTGAATTTGAAGAATGGAAATTATCACATTTTAAAATTATTCAGTCTTCAAACCACTTTTAACAGCTTCTTTTCATATACTGTGTTCATTACAAATATTATTTGCTTGGTAACACTGTTACTTGAAATAAATAAAACTTTGTTTTTTAGGAGAAGAGTATCTAAAATTCTAGTGTCACTAATTTCTATTGTTCTTCCCTGTCACTAATTTATGTCATTTTTCCTCTCTGAATTTTAATAATTTTCTATGTTCAAATTTATCTTTATTCTAAATGTCATGACATTCATAGTCACTGAACACACTAGGTAACTGTGATAATGTGATTGATCACATGGATTATGTTGGTCAGTTTCTATTCTTGAATGGAAAGAATCAACTACAAATATTTGAAGCTTTAGCATTCACTATTTTAATTTTGCCTAGGGACCAGTTTTAATCATGATCAACAAGACTGGTTTATTCAAAATGTTGGGTCAAAATACCTGCAAGCAGAATTTAAAGTTTAAAAAAAGTGACTAATTGGAAGTATAAGAGGTTATAGGCCTTTTAAAGAAATTCATCTGAGGGAAAATCAGGAGCATCATGAGATGTCTCTTAAGATGTCTCTTAAGAATATGTAAATGTATATTATTAATATATTGAGCCCAAGAACTTAAATATATCTCCATTTATAAGTTCAGATACATTCCTTTTTCTCTTTGGCAACTGTAACTTTTGAACCAAAAAAACCCCCAATTTTTTTTTTTCACATTCTAAAAAATGTGTTTAGATAAGAAGGAAAATAGGCAAGCTTACTCTACTCTTGTTACCGTGACTTAATCCACCTCTTCTGTTCCTTGTAAATCCATCTATGAATAAAAACTGTGCCTGAAAAGATACTTAACAGCCTCACTGTACCAGTTGCCTGACCTAGAAATACTGTGTCCCTCTTTGCTAATAGAGTTTAGTGTTTTATAACTTCCTTAAACAGCTAAAAAGTGGTTAAAAGGACTGTAAAGTGACAGCATACCTAGCAAAGTGAACAGTAGTTAAGATGTAAGTTGATTCCATGTAAGTACATACTTTAAAGCTTTATTATCTTTATTCTCTTTATAATGTTTCAACAAAAGTGAAATTTAGATGCAATGTAGAAATTTTGATCTCTTGTTGAAGTTTTACCTATACATTTGAATGCCAGAATTTCTAAATAAATCCATTGATCAGAAAATTTTTTTAAGTCAAAACTTACTTTCTTCAGCTACCACCTCTTCTTACATTGGTTGACTTATTAAATCATAACATTCTTTAATTTC EMBV3_31474 TTTCAAATGTATGACCAAGGAACCAGAGTCCAAGGCTAGAGCCAGAGACACCCCAAGGAG Gene BVT0101_002371 + 0 NULL GK000014.2:49588331-49706787 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053479 TCONS_00053482 TCONS_00053481 TCONS_00053483 TCONS_00053480 1 XLOC_031742 NonCoding TCONS_00053481 XLOC_031742 NonCoding NonCoding LOC100847974 14:49626303-49697517 = TSS39439 578 1 TCONS_00053481_3 158 3 0.991925631556036 0.00741127784238867 0.00568393740530551 0.0110749425086001 0.00210161680925897 0.00644536702123934 0.00272847335355234 0.00111958531814946 0.0046828809670271 0.00234977477762072 3.06814098723112e-84 1.53469131303559e-100 0.000245820256269208 0.000382215185321692 0.0015786242402099 4.29373624368548e-05 0 5.7447399884546e-05 0 0.00604173813361464 0.00819487154714805 0.00483855219423175 0.000420702372921121 1.03860702617528e-192 0.000147722232281736 0.00456439255594087 0.00950169728945378 0.00408070312485245 3.86229595553682e-06 0.000193499531053697 0 XR_232406.1 LOC101909605 PREDICTED: Bos taurus uncharacterized LOC101909605 (LOC101909605), 1e-123 446 82.73 0.666089965397924 TCONS_00053481_3 sp|P61568|ENK13_HUMAN ENK13_HUMAN HERV-K_1p13.3 provirus ancestral Env polyprotein; 5e-07 48.1 48.72 0.240506329113924 1 noncoding 1 0 1 0 -0.0499443812766364 0.876338175867187 -0.0642105500519905 0.300204408087594 TAATGTGGGAACCATGCATTAGATGAGAAGAGAACGCCAAACCAGGACAGAAGGCAGCACCAGGAATCTGGGACCGCCACCGAAATTTCAAATGTATGACCAAGGAACCAGAGTCCAAGGCTAGAGCCAGAGACACCCCAAGGAGCATCTTTTATTTATTCATCATGAGGCTTGCCATCTCCAAGAAATTAAGGTGGTCGAATGGACAGAGAGAGGACCAATCGTTTCAACTAATGACTCTATACATATGCCCCCTCCCTTCACACCCTGGGGAGGAAGGAAAACTAATTAACATTTCTTTAGGCTATGAAGTCTTTCCACTGTGCCTGGGCCCAGAGAAATTATGCATAAACGTCAACCGACAAACTTGGGCTTTCGGCCTGCCTCCAAAAGAAGACTTTCGGACATTGCTTGGATTATTTACTGCCCTTTCTTTGTCTGTAAACCATGTTTATACTACTGAGACTTTAGGGAAAGAGTTAGGAAAAAATAAAAAAACATTATACAAAGGGTTTACTTATAAAAACTTTACTTATACTCCTGTTCATTGGGACAAATGTCAAGCCAAATAAAAAAAA EMBV3_08724 AGGTCATGAGAAGTCAGACCGCAGCCATGAGAAGTCAGAGCGGAACCATGAGAAGTCTGA Gene GeneID:534894|PQBP1:NM_001046389:96_cdna Constitutive 3 NULL GeneID:534894 X GENE PQBP1 MGC129091 polyglutamine binding protein 1 EMBV3_18520 CAGGAACATGCAGGGAATTGTGTGAACTTGAAAACCAAAGAGGACCCATGATGAGGGGCC Gene BVV0102_025172 + 0 NULL GK000007.2:22068535-22076901 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25772 TCCCAAGCTCCCCGTGGGCCCCAGCCACAAACTCTCCAACAATTACTACTGTACTCGCGA Gene GeneID:338063|NDUFA7:NM_176658:15_cdna Constitutive 1 NULL GeneID:338063 7 GENE NDUFA7 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa EMBV3_17334 AAGACCCCAAAGAGAAAGTGCTCTGACGATGATGAGGAGGAAGAGTCTGAGGAGAACAGC Gene GeneID:541248|RSF1:XM_002699063:78_cdna UTR3_Alt 2 NULL GeneID:541248 29 GENE RSF1 NULL remodeling and spacing factor 1 EMBV3_08025 CAGCAGCTAGTTTATGCTGACATGTGCTCGCCTTCATTTCAGTCCCTGACCCCAACTCCA Gene GeneID:781492|NIPAL2:XM_002692793:81_cdna Constitutive 0 NULL GeneID:781492 14 GENE NIPAL2 NPAL2 NIPA-like domain containing 2 EMBV3_13807 ACAGGTATATTGGAGGCATCTTTATTTCTGCATCCCTTCCACTGCCCTACAGATTAGGCC Gene GeneID:533131|MARVELD3:NM_001099055:336_cdna Constitutive 0 NULL GeneID:533131 18 GENE MARVELD3 MGC160006 MARVEL domain containing 3 EMBV3_14860 GACAGTAGCCCAAGCTCAGACCATCTTCCTGCCTTCTCACGGAACCATCTGCTAAATTAC Gene BVT0102_123317 - 1 EMBV3_37783 GK000025.2:37330863-37348779 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147162 TCONS_00147161 TCONS_00147163 1 XLOC_089313 Coding TCONS_00147161 XLOC_089313 Coding Coding - 25:37338149-37344910 - TSS109877 5001 1 TCONS_00147161_3 310 0.533293341331734 2 0.260502958579882 3.09482623363158e-92 0 1.39390407638061e-06 1.73617121972129e-05 5.58172063728815e-06 1.91244996485975e-177 2.23832551491308e-73 8.5668943362885e-127 9.32107965126138e-112 5.89929990876346e-22 1.49372961773625e-20 3.69750027415766e-05 2.26624794736673e-11 1.91073401050555e-11 8.93708387967496e-07 6.13758362765133e-45 0.000667614298354467 4.61424994218594e-22 1.34391954014632e-11 5.27071871095182e-12 2.10396233720085e-24 4.53076416958711e-39 8.27589887884949e-25 6.85544597377475e-22 9.48881124747643e-35 2.61614304145412e-144 6.944441353439e-06 1.04432413279389e-42 1.23316953080298e-70 5.92910519561702e-54 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 2008 89.52 0.296540691861628 NM_145115.2 ZSCAN25 Homo sapiens zinc finger and SCAN domain containing 25 (ZSCAN25), 0.0 818 82.62 0.162767446510698 TCONS_00147161_3 sp|Q6NSZ9|ZSC25_HUMAN ZN498_HUMAN Zinc finger protein 498; 2e-158 458 82.12 0.880645161290323 5 coding 0 0 0 0 -0.172178165340361 0.293228050382057 -0.0126845140690875 0.806491360009784 ATGTCGAGGTGGCTTGGTACAGACAGCTGCGTTCACTGGCCCATCCAGCAGTCATGAAGCATCTGTCCTGAGTCAGTCCCTGTGCCAGGCTCCCAGAGACCCAGGGCAATAAACCAGGCTGAGGTGGAGGGCACAGTGGGAGCAGGGACAGTGACCTGAGGGAGGATGTGGAAACATTGCTGGAACAGGTTCATGATCCTAGGGAAGCTGAACATCTCGACGACTGTAGAATAGCATGTGTAACAAGGTCATGTGTAAGTAAGTGTGGAATAAACAGTGCTAATTGAATGCATGTGCTGTAGAGACCCACAGCGGGGGAGAAATCAAGGTGTGTTCCTTAGAGGATGGCATTGAGTCAGATTTTGAAGGAAAGCACAGGGTGACTTAGTAGGAAATTAAGAGGGAAGGCATTGTAATTTAGCAGATGGTTCCGTGAGAAGGCAGGAAGATGGTCTGAGCTTGGGCTACTGTCACAAAATACCACCAAGTGGGTGGCTTTAACAACAGACACTTAATATCTCCCAGTTCCGGAGGCTGGGAAGTCCCGGATCCAGTTGCTGGCACATTTGTTGTCTGGTGAGGGCCTCTCTTCCTGGTTCACGGGCAGTTGCCTTCTTGCCAGTCCTCATGTGGCAGAGGGAGGGAGAGAGAGATCTCATGTTTCTTCCTCCTTTTTTGTAAGGCCGTTAATCCATCACGAGGGCTCCCACTCACATGACCCCTGTGTGCAGAGAGCCAGCCCTGGCTTCTGCTCTTCTGGGACGTGGTCCCATCCTGGGGGCTCCACCCCCAGACCCTCACCTAATTAGGGTCCAAAGGCCCCACCTCCTAACAGCAGCCCCAGGGGCCTGAGAGCTTCAGCCTGTGAATTTTGGAGGGAACCCAAACATTCAGTCCATAACAGGTGGAAAGAAGTAAAGGAATGTCTGGTTTTAGAGTCAGAGCAAGTGAAATGCACAGAGGTCATTGGTAGTTGTTAATGGGACACGTTAGAAGCCAGGTTCTGGCTAGAAGTTTCCCTTCAGATCTCTTCAGCGTTGGTCTGTATCTCCTTTGTCCTGTAGGCCTGGGGAGCAAGGACAAGGAGGCAAAGACCCAGCTGGCAGACCCCAAGGGGCAGCTCGCTTGCGGGCGGGCAGAGAGGTGTGGGGAGGCCGCTCTCCAGGGCCCGGAGTCGGGAAGACCAAGCGAGCAGCAGGCCGGGAGCTCGGTGGGAAACGCGCCCGGGCCGCTCCTGCCCCAGCACAGCGTTGCCCCGCTGCCCGATGACCTCCAGACCCACAGCTCCTTCTGGAAGCCTTTCCAGTGCCCTGAGTGTGGGAAAGGCTTCAGTCGGAGCTCCAACCTGGTCCGACACCAGCGGACGCACGAGGAGGAGAAGTCGTACAGCTGCGGGGAGTGCGGCAAGGGCTTTGCGCTGCGCGAGTACCTGCTGAAGCACCAGCGGACGCACCTGGGCCGGCGGCCGCACGTGTGCAGTGAGTGCTGGAAGACCTTCAGCCAGCGCCACCACCTCGCGGTCCACCAGCGCAGCCACACAGGCGAGAAGCCCTTCCAGTGCGCGGACTGCTGGAGGAGCTTCAGCCGCCGGCAGCACCTGCAGGTGCACCGCCGGACACACACCGGCGAGAAGCCGTACACCTGCGAGTGTGGCAAGCGCTTCAGCAGGAACGCCAACCTGGCGGTGCACCGGCGGACCCACACGGGCGAGAAGCCCTATGGCTGCCAGGTGTGCGGGAAGCGCTTCAGCAAGGGGGAGCGGCTGGTCCGGCACCAGAGGATCCACACCGGGGAGAAGCCGTATCGCTGCCCGGCCTGCGGCCGCAGCTTCAACCAGCGCTCCATCCTCAACCGGCACCAGAAGACGCAGCACCGCCAGGAGCCCCCGGGTAACCATGGTGTTTACATTTGACTCAGCAGAAGACGTCCTGGCCCTTCAGTTGTCCCCGTGAGGCTGTGAGTACTGTGAGACGTCCACTTTCTGAGATGCTGGACTGCCATTTCCCAGCACTGTTGAGTCCAGGTGCAGAGTCAGCTCTTTTCTGCCTCACGCCTCAGACAAGCCAGGCAAGGCTCATAGCCACCTGAAGTCCAAACCCAATGACAGGCTTCCCTCAGCCTCTGGCTCTAGTCTGTAGGACATAGGGGCTGACCTGACCCGAGTTTGGTCTTTTCTGAGAGGTGTGTAGGGGGCATGGGCCAGCATGGGTTTGGCGTTGCTCATCAGTGGCCTTCTGTTTACCTGAATTAAATGGCAGATTCTCTGAGCATACACTGGGTTTTCAGCCAGTTGGGATCTCAGAAGGGAGCTTCTGTAAGAGTAAGAACTTGCTGTCTTCCCGTGTGGACTCCCTTGTTTGCTTTGAGACCAAAGCTTACTGACGGTTCCTCCAAAGAGTCCCAAAAGGAACATTTTCCCATAGAGCTGTAGTAACCTTATTTTTGATAGCTATTCAAATGCCAAATATTGTTTTCTGTATTTTTCTATTTAGGAATTTTTTTAGAATAGAGAATTTCAAACATACATAAATGAATCCTCATGTATTCATCATTTAGCTTTAACCATTTGTTTATGCATAGCCAATCTTGTTTCATTTCTGCCCCGTCCTCCTCTTCATCTTCCTCCCCAGCTGAAGTATTTTGAAGCAAATCTCAAATGTTTATAGATATTTCAGTGTATACTGCTAAATGTTAAGGATTCTTAAAAAAATTATAATAATAACTACATTGCTATTATCATACCTAAAAAATTAAATAGTTCCTTAATTCCCAATTAATGTACTTAAAAAAGAAACCACATGATTTTTAAAAAGCTCCTTTAAGATCAAAGTAAGATCCATAAATTGTAATTTGTTGCTTGTCTTCTAAGTCTGATATATCTTTTCCCCCTTGATATATGCTTTTCTTTTTTATTTGGCCATGCTGCATGGCTTGTGCGATCTTAATTCCCCAACTAGAGATTGAACCCATGCCCCCTACAGTGGAAGCACAGAGCCCTCACCACTGGACCACCAGGGAAGTCCCTTCCCTTGAAAATTTATTTGTTAAAACAACTGGATTATTTTTCCTGTGGACTTTCTCACATTCTGAATTTTATTGCTTGCATACTCATGGCATAGTTAAATATAGTTCTCTGCCATCTGATTAACTAAAAACTGCAGGTGTAGAGGGCTAGTCAGGTTCATGTTTCACATTTTGGCAAGAACATACTACAGATGGTGGCTTGTCTGGGTTGTTTCTCATTATATAATGTTAAGAGCCTAAATGTGAAGTCAAGTGGGCCTTAGGAAGCATCACTATGAACAAAGCTAGTGGAGGTAATAGAATTTCAGTTAAGCTATTTCAAATCCTAAAACACGATGCTGTGAAAGTGCAACACTCAGTATGCCAGCAAATTTGGAAAAAGCAGCAGTGGCCATAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGCTCAAACTACCGCACAGTTGCACTCATCTCACATGCTGGTAAAGTAATATTCAAAATTCTCCAAGCCAGGCTTCAGCAATACGTGAACCGTGAACTTCCAGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCACTGGACCATGGAAGAAGCAAGAGAGTCCCAGAAAAACATCTATTTCTGCTTTATTAACTATGCCAAAGCCTTTGACTGTGTGGATCACCATGAACTGTGGAAAATTCTGAAAGAGATGGGAATACAAGACCACCTGACCTGCCTCTTGATAAAATTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTATGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTCTATGCAGAGTACATCATGAGAAACGCTGGGCTGGAGGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGATATCACCCTTATGGCAGAAAGTGAAAGAAGAACTAAAGAGCCTCTTGATGAAAGTGACAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACTAAAATCAAGGCATCTGGTTCCATCACTTCATGGCAAATAGATGGAGAAACAGTGGCTGACTTTATTTTTTTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGAAAAGTTATGACCAACCTAGACAGCCTATTAAAAAGCAGAGACATTACCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAGTAGTCTTGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGATTCTTGAGAGTCCCTTGGAGAGCAGAGAGATCCAACCAGTCAATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATGTTGAAGTTGAAACTCCAATACTTTGGCCACCTGATTCGAAGAGCTGACTCATTTGCAAAGACCCTGATGCTGGGAAATATTAAAGGCAGGAGGAGAAGGGGAGGATGAGGTGGTTGGATGGCGTCACCAACTCAATGGACATGGGTTTGGGTAAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCATGGAGTCACAAAGAGTTGGACATGGCTGACTGACTGAACTGAACTGAAGAGCCTAAATGCATTTATTTCACTAATTCTATAAAAGAATCTTCATTTATTAGCTGGGATGCCTCACAGCTGTATCTGTGCACTCATACAGTTCACAGAGGAAAGGAAATACTGGATTCTTCGTTCCCTTATTTACCCATCTTCACAATAATGATCTCGTGGCTTTTCTCCTAAACTAATCACCATGAAAGTGGTCAGTGATTATTATTTTTTAATAAAAAATGGATTCTTGAATTTAACCAATCCAT TCONS_00147167 TCONS_00147168 s 3' 5502 TCONS_00147167 TCONS_00147168 s 3' 1853 EMBV3_29904 CTGGGACAGCAGCGGACACAGACATGACAACCCAGAGTTGTGACGGCCAACCGGATGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32859 CTCATCACTGTTCGGAAACACTCTTCAGGTAGCTCATCTAAGGCCCTCTCCACTTTGTCA Gene GeneID:785050|LOC785050:XM_002690768:536_cdna Constitutive 0 NULL GeneID:785050 10 GENE LOC785050 NULL similar to olfactory receptor 1306 EMBV3_08416 CTCTCTGTGGTTGGATTCAGCCTCTGTGTCTCAGAATGTATCCCAGTGCATGGTCCTCTT Gene GeneID:282661|CD47:NM_174708:38_cdna UTR3_Alt 2 NULL GeneID:282661 1 GENE CD47 IAP CD47 molecule EMBV3_38034 CACTCGACACAGAATGACACTTAAGTGTGCCTTTCTCCCCATTCCAAGTCTCCTCTTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06596 CCTAATTCCAGTTCTAAGAGAAAGTTGACTAATGAGACAGAGGTAGCTCTTGTTGAAGTG Gene BVV0101_006459 + 0 NULL GK000030.2:22745632-22939074 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138406 TCONS_00034472 TCONS_00122072 TCONS_00058128 TCONS_00233183 5 XLOC_084614 XLOC_020687 XLOC_073628 XLOC_035925 XLOC_142665 Coding TCONS_00034472 XLOC_020687 NonCoding NonCoding - 12:6364895-6366558 - TSS25460 1663 1 TCONS_00034472_1 48 0.506915213469633 1 0 8.34717351197335e-10 7.55294998933707e-07 0 0 1.3430468344736e-06 0 0 0 0 0.000411407190845502 0.000767496433422496 0.00016884960262657 0.000210214201268645 0.000191650917828039 0.00126996477062549 0.0135641318459335 0.00252741940803008 0.00766436854674063 0 3.60363795826903e-07 0 0.00424968258548582 0.00400432867505553 0.0054478244682385 0 0 0 0.000974975121570472 0.000467746776754344 0.0027204390629365 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 8e-68 262 85.84 0.137702946482261 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 1e-09 69.8 87.50 0.0330727600721588 0 noncoding 0 0 0 0 -0.0644343619631274 0.597147675601465 -0.0141406486926897 0.771811902889454 GAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAATGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAATAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCGTGCTCCTTGGAGAAAATCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAACCAAACGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTTGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACAGCTTTTGCTTTTTACCTTATTATCAGACAAGAAAAAACCTTGACTTCTCAGGCTAGGAGCCACAGAACATTTGGATTTAGTGATCTAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTTTAAAAGATCTTTTAATTCAAGAAAATAAAATGTCAGGGCTATTAGACACAAGAACAGACGTCTCTTAACATTGCTGGAAAAGACTGGCCCAGTTCCTGGCCCACACATACTACTAAAAATGAGTTGGTGGGATTAGAGAAAGTGATATGCGGGGTGAGAATGCTGTAGAAAAAAAAAAAAAAAAAAGGGTGAGGGAGAGTTTAAAACCTTGAAGAGTAGTGAGTTTCCTGTTGTTGGAAGTATTCAAGCAAAGATTAGATGGTTACTTGTCATCTAAAAAGCTATAGACCAGATTTGGTTTACAAAACTAACTGGAGAAGCTTATAAACATGTTGTGCAACACCTCTTTACTTGCTTCTCATATTTAGGTGTGCCAAAAGTTTTAAAAACTGATAATGCCCCTTTGAAGCTGTGGAGAGATTGTTTACTAACTTTAAATGATTTCCAAAAATTATTAGGGGACATTAATTGGATACGCCCTCATTTAAAACTGACTACTGCAGATTTAAAGCCTTTATTTGATTGCTTAAAAATTGATCCTAATTCCAGTTCTAAGAGAAAGTTGACTAATGAGACAGAGTTAGCTCTTGTTGAAGTGTATGAGACTTTAAATGGTCAGTTAATTAGGATTAATATTACCAAAAGATGAGATTAAATTATTCTTGCCACAAAACATACACCTACCGGGTGCTTATGACAAAAAGGCCCATTGGT TCONS_00036102 r 5' 1163746 TCONS_00036102 r 5' 1163746 EMBV3_30548 ATGACTCTAGAAACCCGACTACTGGCCTTCCAACCTTCACGATTTCTCTTGGCCATGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36770 TGTGAGTTGGAAATAGACAAGCTACGGTGCCCCAAAAGCAAGACGAGAAGGAGGTGTGAG Gene BVV0101_024855 - 0 NULL GK000001.2:119583581-119603869 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001948 TCONS_00001943 TCONS_00001949 1 XLOC_000482 Coding TCONS_00001949 XLOC_000482 Coding Coding WWTR1 1:119437287-119586286 j TSS1004 4727 1 TCONS_00001949_2 400 7 0.968321722439227 1.05969929032496e-15 4.09528982135889e-34 8.46705757972686e-21 2.86257348330316e-82 2.98753288305086e-26 3.42489481776002e-15 7.28853754531893e-117 6.21015032020296e-33 1.98487469739419e-81 0.000178061090184745 5.03472713315828e-06 1.16442076456691e-09 1.27927113848261e-48 1.93600742387847e-20 2.63796509154394e-12 0.000941406691657903 0.00524017771617508 0.00296068705696688 5.61560388823338e-20 1.18886630921015e-168 2.65945091449959e-140 0.00333775799000592 0.000234052134855262 0.000650154860925138 1.52574362480714e-21 1.23533080102021e-27 4.10105442433266e-09 0.000351118309243653 1.31168624606246e-08 0.000651866683982531 XM_005201826.1 WWTR1 PREDICTED: Bos taurus WW domain containing transcription regulator 1 (WWTR1), transcript variant X3, mRNA. 0.0 8480 100.00 0.994499682674 NM_015472.4 WWTR1 Homo sapiens WW domain containing transcription regulator 1 (WWTR1), transcript variant 1, mRNA. 0.0 2845 87.62 0.484662576687117 TCONS_00001949_2 sp|Q9GZV5|WWTR1_HUMAN WWTR1_HUMAN WW domain-containing transcription regulator protein 1; 0.0 742 97.42 0.965 1 coding 0 0 1 1 -0.0400681235532799 0.761209964882389 -0.00880201077619461 0.888740891109745 GGACAGTCCGGGATCCGCGGCGGCCGCGCAGTCTGCTTCTCCGCCTCTCCGCGGAGCGCGAGCGCCTGAGGCCAGTTCGGGGGATGTGAGAGCCGAAGCCTCTCGGCTGCCAGACACCGAGTAGGGTCGGGATTTGCCAGCCGGGCCCCAGCTCCAGCCCTGCAAGCTCGGGACGCAGCCGAGCGACCCAGGCCCAACGGCGAGTTCGGGCGGGACGGCGGCCACCGCACGCCCAGACTCGGCTTCGCTGCGCGCCCAGCAGAAGATGAATCCGGCTTCGGCGCCCCCACCGCTCCCGCCACCCGGGCAGCAAGTGATCCACGTCACTCAAGACCTAGACACGGACCTCGAAGCCCTCTTCAACTCGGTGATGAATCCCAAGCCCAGCTCGTGGCGGAAGAAGATCCTGCCCGAATCGTTCTTCAAGGAGCCTGACTCCGGCTCGCACTCGCGCCAGTCGAGCACCGACTCGTCCGGCGGCCACCCGGGGCCCCGACTGGCCGGCGGCGCCCAGCACGTCCGCTCGCACTCGTCCCCCGCGTCCCTGCAGCTGGGCACGGGCGCGGGCGCCGCGGTCAGCCCCGCGCAGCAGCACGCACATCTCCGTCAGCAGTCCTACGACGTGACCGACGAGCTGCCGCTGCCCCCGGGCTGGGAGATGACCTTTACGGCCACTGGTCAGAGGTACTTCCTCAATCACATAGAAAAAATCACCACATGGCAAGACCCTAGGAAGGCGATGAATCAGCCCCTGAATCATATGAACCTCCACCCAGCTGCCACTTCCACACCAGCGCCCCAGAGGTCCATGGCCGTGTCTCAGCCGAATCTTGTGATGAATCACCAACACCAGCAGCAGATGGCACCCAGTTCCCTGAGCCAGCAGAACCATCCCCCTCAGAACCCATCAGCAGGGCTCATGAGTATGCCCAACGCGCTGACCACCCAACAGCAGCAGCAGCAGAAGCTTCGGCTTCAGAGGATCCAGATGGAGAGAGAGAGGATTAGGATGCGCCAGGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTAGACAGCTCCCCATGGAGGCTGAGACTCTAGCCACGGTTCAGGCTGCTGTCAACCCTCCTGCCATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAGATCCTTTCCTCAATGGGGGACCATATCATTCGAGGGAGCAGAGCACCGACAGTGGCCTGGGGCTGGGGTGCTACAGTGTCCCCACGACTCCAGAGGACTTCCTCAGCAACGTGGATGAGATGGACACGGGAGAAAACACGGGACAGACACCCATGAATATCAACCCTCAGCAGACCCGTTTCCCTGATTTTCTTGACTGTCTTCCAGGAACAAACGTTGATCTAGGAACTTTGGAATCTGAAGATCTGATCCCCCTCTTCAATGATGTAGAGTCCGCTCTGAACAAAAGCGAGCCTTTTCTAACCTGGCTGTAATTAATACCATTGTAGCTTGGATGCAGCCGTGACCTGACATTTCCTGGGCCTCTTGGAAAAAGCGATGGAGCAGAGCAAGGCGGCAGGTGAGCTGCCTCCTGCCTCCATCACACATGCTCCCTCCTTTCCTTGTGGCCAGGTTAATAATTGCCTGGATTTGATTGGCAGTCACTTAAGTTAAACATGAATAAACATTTTATTTCTGTTTTCTGCAAGCCTGCATTCCTGTGATGGGTTGTGCAGCAGAATTGATTATGCAGAATTGCTTCTTTGCTTTCCTCTCTGCTACCCCATGACCAAGCTTTATGGGTGTTAGCTGAAATTTGTACATCAATTGATTATAAACCATGAAAAACTGATGACCACAGGCAGTGACTTTTGACAGGTGGCTGGGTCCAGGAAATGTACACAAAACTCGACCTGATTTACAGTTTCAAAAACTGTATTGATGACATTAGTACCAAATGCTTTAAAGAATATTTAACTAGAGCTTTAAAAATCATTGTACTGATAGTAAAATTCTGCTGTTTGGAATACAATGTAGTTTTCAATCCATGCAGGTTCTGATGGCTCTTATTACCCGTATTCACAAAGGCACACAGAGTCCTCTTGTAGTTTATCCTTCATCATTTTACTGCACAGCATCTAGACAACTAGTCCTTCCAACAGGAGAGCGGCAGTGGCATTAGTCACAGTTCCTACACCAAGGTCTCATGAAAGAGACCAGTTTGGTACTAATTATGAACATTTATTAAACAAAAGGTTTTTAAATGACAAGTTAGATTTTTTAAAAAAATTACAGCTTAGAACTTGATGTTTATTTTATGAAGCACTATCATTTGGTGACTGATGACAAAGCGCAGCCAAATGTTTTTGATAAATCGGTGGCAACTGTATTTTTGTCCTTTGAAACTGTTCTGAAAACATCAGGACCACATAGCTTTCAACCTGATGGCATACAATGAGCTGTTGCTTTTAAAATTCTGAAGCCTTGTTGGTTTTTCTTCTTTCAAGATTTCTAGGGTTTAAAATAATCTTATCTATGAAGCTGTTTGAAGGATGAAGCAGATCTCTGACTGACAGGTCAAAAAAGCCCCCTGAGGGTGTATGGTGGAGACCCTTAGTGTTTCCGAAGTCACTAAAGTTGATTCCCAGATGTATTATCCTAATCCTGTTTGCTACAGTTGGTATAGAAAGGCATGAAATATGTACTCAGTACCTCTTATGTAACCAAAACCATTTTTTTTTTTGTTTTGTTTTTGTTTTTTATTAGCTTTTAAGGACTGAGAGAGAGCATCGGGTTCGCCTGGCATGCACTCTGCCTGCATTGCCAATGAAGTCCTCAATTGTTTAATATTTTGAACTGACATTATTTATAATCTATGAATTTAATATCTTTTTTGAGAGACATTAATAGTGCAGGTCTCTGAGAGGAACCTTTCCATTCCCAAAGGGGCTTATTTGCTGGGGATCTGAGATCCTTTTTGATCTCCCAAAAGACAGACAGGCAGAATACATCTTATCTTGTTGGAATGAAGGCAAGTGTAAAGGTCAGAGATGAAGTAGTACCGTTAGGGAATACAGTGGAAAGGCTACTAGGTGTGAGTTGGAAATAGACAAGCTACGGTGCCCCAAAAGCAAGACGAGAAGGAGGTGTGAGGTGCCCCCAAAGAACAAAGCAATGATTTTCTCCTACAACTTTTGTACCAAAAGACTGTTGTAGAAGAAAAGAAGGCTTCGGTGCACTTTATGTGGGAGAAGGAGGCACAGCGCTCGTGTTGCCCTGTCCACGCTGATGTTAAGTGAGTAGGCAGATGAGAGCTTAAACCTACCGTTGCTTCCAACACAATGAAGTGACTTTTTCCCCCTGAAGGACCCATGGTTTCTCTTCCTCTGATTCCATCTCTTTCTCAAAACACTCTGAGAGATGAGGGTAGATGTTTCTATTGCTACTATATTGAAGGGAGCACTATTTCTTTTTCTCTTCTGTTAGCAATAATTGCAAAAAGCATTGTACATTCTTTCTAAGAAAAAGCAAAAAAAAAAAAAAAAAAAAAGACTCAAAAACAAGGGACCTAGTAAAACTGAGCAGTGTTACTGTATTTTTAAAAAATATTTTTATAGATTCATTTTCAGGTTATTAAACATTAAAGAAACAATTATCCCTCCTTTTTTTAAGTAGTTAAAACATTGATGATTTGTATTATCAATTTTTAGAAATACTTTCCTAGTAAGCTTGTGGCATTAGAAAATACTAGAAGAATTTTTTTTTAGTGAAATTAGTTGGAACACTTATTAATGAACATAACAATTATTTTTCCAGAATTAGATACAGATCTTGACTACATGTTTACTAATAAATGAAGCCAGATCTAATTTTTGTTGTTATTTTTAAGGCCATGTTATATGGCCTTTGTTAAAGAACACTAAAGCTAGAAATCTAAAAACAACTTTTTAAAGGTTCTTTCCTATTATTGTAAGTGTTAAAACCCCTGCAGAATTCATGATAAGGTGCTATTTATACTATATTTCTTATTATAAAATGACTGCCAAATATCATGTCTTTTTAGTCCTAAGTCAATCAGTAGATTTCAACATTTCATCCAGATTAAAAATGGAAAAATAATTGCAGAAATCTTTCTTTTAAGGTATTTTCTTTCCCTGATAAAACACATTTCCTTGAAGTAAATACATTGTCAAGACCTATTTGCAATTCTGTTAAATCTAAGTAATTGTTAGTGTTTCACCATAGAATTTAGGATGTGATATGCCTTTCTTTCGCTGATTATACAATATAAGTAAAAACAGACTGAAACAGTTAGTATGCTGGGGGTGCTACTGACTCCAGCTTGGCAGAAAATCTTTCTGGAGAAGAAGGTGATCTGGAGTGAGAGAGTTTTGCTAATGACATGTGATGTTCTCATAACAGAAAGCAACTTCCAGAAGTGCAACTTTTATGACAAACAAAAGCTGTTAAAAGGAAATTATAGATTAATTGGGAAAGTAGGTGATCAACAGAGACTGTTTCCCTAACACACTACATCATTTATGTGTTCGTATTTTAACTTTTTAAAAAATTATTTCTACATTTTGTAATATGATATATGTGTGTTTATTTTTAATTCAAATTGCTATGCATACAGAGAGTATGCAGAAAAATCAATCAGATCAAACTGTTTTACCTGGAGTTTGGTACTGGTTTTTACTTCTCTGATTCTGTATAAGAAAAATAAATACAATTGAATTTCCACTTGGAACC EMBV3_28833 TCCCCTCCAGGAACGCACTGCTGTCCACTTTTCTAAACGTCCGTTTCTAGAACCTAAGCA Gene GeneID:785549|FBRSL1:XR_084599:151_cdna Constitutive 0 NULL GeneID:785549 17 PSEUDO FBRSL1 NULL fibrosin-like 1 EMBV3_38815 GGATAAGGACGATGATGTAATAGAGGTCACTGGGAAATAGCTGAGGATCCCCTCTCCACC Gene GeneID:784245|LOC784245:XR_084033:582_cdna Constitutive 0 NULL GeneID:784245 22 PSEUDO LOC784245 NULL similar to hCG1997495 EMBV3_02389 CCAGATGATAAACAGCTCAATCTTAGTGTAAGGTCAGGGAGAAAACCCCTGTCTCCTCAC Gene BVV0102_069201 + 0 NULL GK000011.2:44785036-44876745 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04444 TTGCAACACGAACCGGACCGAGCATTTTATGGACTCAAGCAGGTGGAAAAGGCCAATGAG Gene GeneID:528728|PELO:NM_001034566:73_cdna Constitutive 0 NULL GeneID:528728 20 GENE PELO MGC140805 pelota homolog (Drosophila) EMBV3_01018 ATAAGTTTGGACAGTTCTGTACAGTCGGGAACGAGGAAATTGAGATGGCGCGCATGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09860 CCCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATT Gene GeneID:282411|CACNA1G:XM_002695887:206_cdna Constitutive 0 NULL GeneID:282411 19 GENE CACNA1G NULL calcium channel, voltage-dependent, T type, alpha 1G subunit EMBV3_17639 ACCGCTGTGTTTGACCAGTTATTATCCATTTGCAGGTATGTTCAGGTTAAGCCAACGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01294 CTATTCTTCCCCATGATCCCACTGCAGATGTTTTTGTTACGCCAGCTGAGGAAAAGCCGG Gene GeneID:518501|BRIX1:NM_001034529:24_cdna Constitutive 0 NULL GeneID:518501 20 GENE BRIX1 BXDC2 MGC127790 BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) EMBV3_24170 CCTCTGCTCATCCTGCTCTCTTCTCACAGGAGTCTTTCCTTTTCTCACCATCCAATCCTG Gene BVT0101_020132 - 0 NULL GK000010.2:12369942-12383330 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016023 TCONS_00016018 TCONS_00016027 TCONS_00016019 TCONS_00016025 TCONS_00016026 TCONS_00016024 TCONS_00016033 TCONS_00016032 TCONS_00016031 TCONS_00016030 TCONS_00016017 TCONS_00016021 1 XLOC_008612 Coding TCONS_00016033 XLOC_008612 Coding Coding DPP8 10:12367162-12374968 j TSS11179 690 1 TCONS_00016033_3 123 0.191304347826087 4 0.912107623318386 0.0134377784464281 0.0133430581383069 0.0167790634047996 0.0115101811876165 0.0124524680481679 0.00478653223532609 0.0134217964219477 0.0102660845159239 0.0161520743571845 0.00158680345035321 0.000394852267743377 0 0.000690332895441834 0.00480998110319956 0.00369923030702117 3.77706479331009e-37 1.40087442724385e-21 2.35018054118686e-15 0.020543460646891 0.0177972128361915 0.00601754560524625 1.4144637732038e-163 0.00127078096622542 0.00150278291326607 0.0162969834250371 0.0186057368884563 0.0112728003743704 0.000209226668324318 6.99931534971044e-05 0.000108147200748222 XM_005211354.1 DPP8 PREDICTED: Bos taurus dipeptidyl-peptidase 8 (DPP8), transcript 0.0 742 99.76 0.598550724637681 XM_005254500.1 DPP8 PREDICTED: Homo sapiens dipeptidyl-peptidase 8 (DPP8), transcript 1e-175 619 93.92 0.592753623188406 TCONS_00016033_3 sp|Q6V1X1|DPP8_HUMAN DPP8_HUMAN Dipeptidyl peptidase 8; 3e-66 217 98.04 0.821138211382114 0 coding 0 0 0 0 -0.40102660019932 0.120112828469449 NA NA CTGGGATAACTGCCTGCTGAGGAGCCAGTTCTAGGCTGCAGCTAAGAGGTTTTTATATTCTCAGCTCTATTCTGGGGGGGTAGGAGGGGATGGGGCAGAAAGTCTCCAGCTCATCAGACCTGCAAGGGGACAAGGTCTTCAGAGGCTTCTGGTCCTCTCCAGTTTCAGAAAAGTCACAACGCATTCTGCTACAACTCAGGATTGGATGGTGAGAAAAGGAAAGACTCCTGTGAGAAGAGAGCAGGATGAGCAGAGGGATCTATGCTTGAAGTTGAGTCACTTGAAAAAAGATCTCTTTGAATGTGGAAGAGATCTGAACAGATGAAAATACAATCAGGAAAATGCAACATGGCAGCAGCGATGGAAACAGAACAGCTGGGTGTTGAGATCTTTGAAACTGCAGAGTGTGAGGAGAATATTGAATCACAGGATCGGCCTAAATTGGAGCCATTTTATGTCGAGCGATATTCCTGGAGTCAGCTTAAAAAGCTGCTTGCTGATACCAGAAAATACCATGGCTACATGATGGCTAAGGCACCACATGATTTTATGTTTGTGAAGAGGAATGACCCAGATGGGCCTCATTCGGACAGGATCTATTACCTTGATAACAAATCAGTTGATCATGATCTTACTTTCAAAGTAAAGATGCCAGATATTACTTCTTCCTAAAGCTAATTGTAAATGATT EMBV3_33584 CAAGAAGGCTGTGATAAAAGGCAAAGGATATCTAAAATGATGGGGCTACCACAACTGACC Gene BVT0102_036434 + 0 NULL GK000006.2:93867385-93941974 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04043 CAGGTGTCACTGCTGCCTCTTTTTTAATCCCTCTGAATGTGAGAACACTGAGCCCAGCCA Gene GeneID:618168|VPS4A:NM_001046615:447_cdna Constitutive 0 NULL GeneID:618168 18 GENE VPS4A MGC137836 vacuolar protein sorting 4 homolog A (S. cerevisiae) EMBV3_13046 TCCTCTCGTGACACTACCATCCTCCCGGTGAAAGCCTGAGAAGAAGCCAGAATTGAGAGT Gene BVV0102_166278 + 0 NULL GK000019.2:30936321-30963510 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099561 1 XLOC_059804 NonCoding TCONS_00099561 XLOC_059804 NonCoding NonCoding - 19:30940307-30941508 - TSS73937 1201 2 TCONS_00099561_1 52 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0014954074824586 0 0 0 0 0 0 0.000572901467151208 1.39588907124254e-05 0 0 0 0 0 0 XM_001789045.3 SHISA6 PREDICTED: Bos taurus shisa family member 6 (SHISA6), partial mRNA. 0.0 2167 100.00 0.999167360532889 NM_001173462.1 SHISA6 Homo sapiens shisa family member 6 (SHISA6), transcript variant 3, 4e-172 609 72.58 0.999167360532889 0 noncoding 0 0 0 0 -0.163954860676812 0.45495224593096 0.0184050857454309 0.737346486143988 ATTTTTTTATATATAAATGCAGCATTTTAGTGACAGATTTGATATGAGAGCTGTGTCTTCCTGCACTCTGTATTTGATTTCTGAAGGCAGCATACTACAGGAGGAAAAAACCATGGGGCTGAGGCTCTTGGAGAGTCGGCTTCTGTGCTGGCTTTGTCTCCGTCTTGCCACGTGACCGAGGACCAGCTGCATTCTCCCTCAGCGCCTCCTTTTCCCATGTGTAAAGCAGGGGCTTGGACCAGATGAGCTCTGAAGTTCTATCCCACTCGTACATGTAGGGCTCCCATTCCCCATTAGTACCCCCTCTTCTCAGCATCCCTTCCCTCACAGCTGGGCTACACACACCCCATTCCACGTGCCCACGGCAACATGGTCAGGTGCCCTGGGCAGTCTCTGCACTCCTTCCCAGAGCCCGGGGTGGGCCCCGTGGTCACGGCTGCCCCAGGACACTCTCCCATCTGAAGATGGAGGGCCCCACCTGTTCAGTGGGCTACCAACTGTGTGTCCTGGAATCCACCCCCACCCCATATAGACACATCCGTATCACCCCAGGTGTCTGAGTCACTGGGGAATTCTGAAGTGCTCATCTTGATGTGGTCCTTAGAGCTGGAGGGAGGCTGTTCTGATTTCCGAGATGGCATGGGCTAGAGGAGACAGATCCAGAGGTGGGCCCACGATGGCACAAAGTCTGTATCTGCTATCAGCTCGGTGATGCATTCCAAGCCACGGGGGGGACAGAATGCACTGCAGGGACTCTGCAGCGAGGGGTGTCATGTCTCCCACCAGAACCTGTGTCCTGAAGACTGAGTCCGGACACGGTGCTCTGCACCACCTGGAGGAGGGGGAGGCACCCCCCTGGGCTGCTAAGAGGTGGGCACCTACCCCATCCTAGTACTTCTCTAGCCCCTCCTCTCGTGACACTACCATCCTCCCGGTGAAAGCCTGAGAAGAAGCCAGAATTGAGAGTACAAGTCAGTACCACCGAACCCATCTTGTAAATCGGCAAACACATCCACCATCCATCAGTCAGAGAAAGGACATCCTGCGTTTCCTTAACGCCCTCCCTCCTGGGGGAGAGGAAGACCCCTGCTCCTCTCTGCTGCCCACTCCTGCCATGACCTTTGAATGCCACTCCCTGGGAGGACTCAGTCATTTGCTTTGTAGTGGCAAATATTCCTCTAGTTCTATAACTCAACTAGAC TCONS_00093240 . 3' 3988 TCONS_00093240 . 3' 5188 EMBV3_36844 GTGGTCGCTGTCTTCCCGGCTCTTGCGCGGGAGCGAACTGATGAATCCATAGAAACCAAA Variant GeneID:767983|SDHAF2:NM_001077045:130_cdna 125^256 2 EMBV3_24446 GeneID:767983 29 GENE SDHAF2 MGC128747 succinate dehydrogenase complex assembly factor 2 EMBV3_26405 TGCCTGGAAGTGTTCTTTGAGGGCTGGTTGAAGGAGATCTACCCTGAGAAACGGTTCGCT Gene GeneID:520781|TRIM66:XM_002693107:502_cdna Constitutive 0 NULL GeneID:520781 15 GENE TRIM66 NULL tripartite motif-containing 66 EMBV3_40758 GAACCCTGAATATCTGGAACATGATGCCTAGGGAAAGAAACCCTGATGCCTCCTATCCCC Variant GeneID:614554|TBC1D5:XM_002685181:48_cdna 844^913 1 EMBV3_37019 GeneID:614554 1 GENE TBC1D5 NULL TBC1 domain family, member 5 EMBV3_01592 AAGGCTCAGCCCTGACTTTATGATTGGGGAGGAAGATGACGATCTTATGGATGTGGCCCT Gene GeneID:520734|MED1:XM_002695956:264_cdna Constitutive 0 NULL GeneID:520734 19 GENE MED1 NULL mediator complex subunit 1 EMBV3_31726 TAGCTTGAAAGACAGTGGCCGTGGTGACAGTGAAGCAGGAGACAGTGATTATGATCTGGG Gene GeneID:539464|PCDH18:NM_001102229:47_cdna UTR3_Alt 2 NULL GeneID:539464 17 GENE PCDH18 MGC165815 protocadherin 18 EMBV3_21211 ACACCAAGTGTTGTCTGGATGGTGGGATTGTTGAAGGAAAGCAAAATACACTTCCAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08604 TCACCCAAATCCAAGAAACCCAGAGAATCCCAAACAGGATAGACCCAAGGCGAAACACCC Gene BVT0102_167807 + 0 NULL GK000011.2:16367941-17295395 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141532 TCONS_00210178 TCONS_00017462 TCONS_00040584 TCONS_00020011 TCONS_00219680 TCONS_00253720 TCONS_00214738 TCONS_00233559 TCONS_00199627 TCONS_00220662 TCONS_00190337 TCONS_00189806 TCONS_00170310 TCONS_00207366 TCONS_00022065 TCONS_00175849 TCONS_00224114 TCONS_00032588 TCONS_00252354 TCONS_00006357 TCONS_00175821 22 XLOC_085960 XLOC_128688 XLOC_009039 XLOC_024400 XLOC_010689 XLOC_132999 XLOC_156659 XLOC_130757 XLOC_143041 XLOC_121280 XLOC_133979 XLOC_116372 XLOC_115843 XLOC_103556 XLOC_125883 XLOC_012736 XLOC_105628 XLOC_137410 XLOC_018828 XLOC_155295 XLOC_001920 XLOC_105600 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_38989 GATGAAAGTGCTCATGTGCAGCTCCAGAATGTGGAAACAGCAAAAGAATACCCCTAGTAC Gene GeneID:541056|GRM3:NM_001098123:35_cdna Constitutive 0 NULL GeneID:541056 4 GENE GRM3 NULL glutamate receptor, metabotropic 3 EMBV3_06495 TCCATTGTTCGGGATATAGGACGCCATGCGGTTCAGGCCCTTTGTGCCACATATTCCGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13143 GTACACGTAGACCGCATCACCATGAAAGGAGAGGTTATTGGTTGTTCTGATGGCTGCACG Gene GeneID:337914|PAG20:NM_176629:146_cdna Constitutive 0 NULL GeneID:337914 29 GENE PAG20 NULL pregnancy-associated glycoprotein 20 EMBV3_40392 GTGAGGACAGAGACCCAAACCCTGAGCTGTTTAATAGAACCCACAGCAGAACATCATTGC Gene BVV0102_105964 - 0 NULL GK000020.2:6848941-7603232 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01189 CGTCTACGTCGTCAATAAGGAGATCTGCGTCCGGACGGTCTGCGCTCACGAGGAGCTCCT Gene GeneID:281912|MFAP2:NM_174388:27_cdna Constitutive 0 NULL GeneID:281912 2 GENE MFAP2 NULL microfibrillar-associated protein 2 EMBV3_25140 CTACGGCCGCTGTGTGGTGGGGAGAGGCCGGCACAATACAACGGCATTGGGAATATATAT Variant GeneID:540507|ANGEL2:NM_001099110:99_cdna 115^440 3 EMBV3_15170 GeneID:540507 16 GENE ANGEL2 MGC155123 angel homolog 2 (Drosophila) EMBV3_25243 CAGTGTTGGGCATCAACTTCTCGCACTACAAGGGTGGCTCCCACTTGGACAAGATACCAA Gene GeneID:537141|KLHL29:NM_001164494:180_cdna Constitutive 0 NULL GeneID:537141 11 GENE KLHL29 NULL kelch-like 29 (Drosophila) EMBV3_29943 TCCAGGCTCAGATAAACAGTCATACATGATATCCACCCAGTCATTCAAAAGTTGCTCGGG Gene BVT0101_050183 + 0 NULL GK000002.2:107842358-107844324 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106155 TCONS_00106156 TCONS_00106157 TCONS_00106158 1 XLOC_062734 Coding TCONS_00106155 XLOC_062734 Coding Coding CNPPD1 2:107842860-107846859 j TSS78179 2731 1 TCONS_00106155_1 175 0.329549615525449 3 0.317658829414707 8.40639849410316e-27 0.000127417399686039 1.69989633462403e-09 6.91463372130067e-135 0.000106148626911883 5.97208244169458e-14 3.96855861488613e-69 4.62300410485513e-06 1.69053028993687e-30 4.43382969484993e-18 1.89588406823125e-07 3.5899634403252e-26 1.13811050186313e-05 5.19346541158338e-05 3.37170482938893e-14 0.00141645811893951 0.0022141004879879 8.75557082348022e-125 1.52034592033329e-19 2.46893314998238e-26 7.56167560581352e-06 2.27654341752163e-05 0.00129891268079502 0.000916515997977236 6.44736879333998e-25 8.25277892944143e-11 0.00012119497000003 6.10438604290423e-05 2.11568251540347e-05 9.94531495372662e-05 NM_001015538.1 CNPPD1 Bos taurus cyclin Pas1/PHO80 domain containing 1 (CNPPD1), mRNA. 0.0 2156 99.75 0.44013181984621 NM_015680.4 CNPPD1 Homo sapiens cyclin Pas1/PHO80 domain containing 1 (CNPPD1), mRNA. 0.0 1002 77.67 0.440497986085683 TCONS_00106155_1 sp|Q5E9J2|CNPD1_BOVIN CNPD1_BOVIN Protein CNPPD1; 1e-117 344 99.43 0.994285714285714 0 noncoding 0 0 0 0 0.0862465266500815 0.534682205167306 -0.00295025088402664 0.968905280307652 GAGGATTGGCGGCTCTACACTGATCCTCGGGAAATCTTTGAGGTGCTGAGCTGGCTGGAGGGCTGCTGTCCTGCCTGTTGGCTATGGCATATGTGAGCAGCGTGGCCCTCGCCGTGGCATCGATGGCCGTAATACACCAGTCCTTAGGGCTGTCCTGCAGCCCCCCGCCTGGCCCTCCAGACCTTGGACTGGCCTCCAGGTGCCTTTTGGAACCCTGCATACCTTCTCCCATGCCACAGTGCCTGCCGTCTCCTGCTAATGTCTCCGGCTGCCTGGAAGGCAATGTAGTGTTGCGTTCACTGTGGGGCAGTCTGCTAGTCTCGCTGACTCCCCCACCATTGCCTCCTCCGGACCCTCCTGCTCCCCCCATTCTTCTTCACAACTGCCCCCTTTGCCAGAAGCTCCAGAAGGACTCCCCAACCTGCCGTGCCTGCCACCACCTCAACCATACTGTCCCCACGGGGCCCCCCAGTCCTTGGTCCCACTCCCATGGCCTGGCTCCCCCCTGGCCTTGGAGCCCAATGCCCCCTCTGCTTCCACAGCCCCAGCAATGTTCCCTTTTCAGCATCATGGAGCTGGCCCGCCTGAAGTCTTTCATTTTCCCAGGCTAGGTAGGGTTCTGAGGAATGTGTTAAGAGGATTTGGGAGTCCCTGAGAGCCTGGAGGGGCAAAGCTTGATCTGGGTCCTTGGCTGGTCTCCTGTCCTCCTGGGTGATGGAGCTTAAGGGGGTCGTGTGGCAGAAGGACTGAAGATCACTTGCTCTTCTGTCCCTCAGTGGCTGATTGCCTGGCCAGGGCAGTGGTGGTTCCAGGGAAAGCCTCAGCTCAGTGACCAGGGGCGTGTCACAGGTGGACAGGGGCAAGGCTCCTGTCTCTCCATGTCCCCTGGGCTCTTCTAGACTTTTGCTTTTGAGTTTCCTAGGATTGGGCAAGGGAGGGAGGAAACATTGACCAGGGTCTGTTTGATGTCCCTGAGGTAGGAGAGGCAGGGACTGACAGGGCCACCCATGGTGGGAGTTGCTGAGGGAAGTGGGAGGGGGGAAGCCTCCCATACCCGTGCCCAGTCTAGAAGAACCAGGGGCTTCTGGGACCTTCACCCGGCCCTTTTGTCTTCCAACATTCTCTTCTTAGTCCCCCGCTCCTGGGCTTTTCTCTCTTCCAGTTCCTCTCCTGGGTGTTCTCTTCACGGGCCTCTCTGGCCACTGCTTTATATCTGGATTTTTCACGCTTTTGTAGAACTAAGGTTTCAATAAACAGTTTTAGTTGCATGGCCTGGACTCTTCCTTCTGCAGCAGCCCTCAAAGAACTCTCCTCCCCAGATCTTCCTTCTCAGCCTCCTACTCCCTGATCCTACCGTCCTGCTGCTCATTCTCTCTGACCCCCATTCCAGAATGTCCTTGTTTGATGGTCATAGGTTCTCATACCAAGCTGCTCCCTCGTTCCTGCTCCCAGCACCCTGGGGTCCCTAACACTCCTCGACTCTAGTGCAGTGGGGCACAGATGGTGACTGTGCGGTGCCTAGGGGTAGCCCTGTCTGTCACAAGTTCTGAGTGAGCACCATCTTTGTGGATCCCAAGGCCATCTCATGGAGAGCATATCCAGCAGAGCCCCGTGAGCTCCTTGAGGGCAAGCCCAAGGACACTTTGTCTCCTGACTTCCTTTCTGGGCTGACAAATGGTGGTAATTAGCGTAAGGGCTTCCGTGGTGGCTTAGCAGGTAAAGAATCCGCCTGCGATGCAGGAGACCCGGGTTCAATCCCTGGATTGGGAGGATACCCTGGAGAAGGAAATGACAACCCACTCCAGTATTCTTGCCTGGGAAATCCCATGGGCAGAGAAGCCTGGTGGGCTACAGTCCATGGGGTCACAAGAGTCAGACACAATTTAGTGACTAAACCACCACCAAAGAGAAGACCAAGGCTGGGTTATCACTGGAAGAAGAAGAGCAGCCAGCTGAACCGAGATGATTTGGTACCACAGAGGAAGAGACACAGTAGGGGTGGTACTGCCACCTAGGGGGCATCTTGGAAACTTATGGGTCATTTTTTGGTTGACAAAAATTTGAAGGGATGGGACGTACTGGCACTTAGTCAGCCTATATGGGAAGCTACACATCCAGAAAGGCTCGAGAATTCCCTTATGAAGAATTCCCGAGCAACTTTTGAATGACTGGGTGGATATCATGTATGACTGTTTATCTGAGCCTGGAACTACTTATTTTCTCTAAGCATGTAAACACAGAATAGATTTTGCCCATTTGGAAAGACTCTGTTTCCCAGGAATGCATCTCTGTGTACATTAAATCTATGCTTTGTTCAGTACTTTACAAAGAACTTGTTCACTCTTTTGGAACATCGGGTCACGAATGGCAGCGCTGCCGGGGGTACACCTGTCATCAGGGAAGCACCAGTATCAGCTGGGATTGTAGCTGTCACATCTGTGGCAATTCCACTTGAGGGGTGGGCACTGGGCTGCTTCACTGTCTTCTAGTTTAGTTGGACCCAAGCTTTCCCACGGTGAAATAAGTCATTATAAATTACTTTGAGGACTTCCCTGCTGGTCCCGGGGCTAGGACTCCGTCCTCCTGATGCGGGGGGCCCAGGTTTCATCCCTGGTCAGGGGAACTGGATCCCACATGCCACAACTTAAGAGTTTGCACGCCACAACTAAAGATCTCACATGCTGCAGCAAGGATTGAGGATTCTGCTTCCCCCAGTTAGGATTGGAGCAGC EMBV3_00092 GCTGTGAGGTGTTTTGCTTAGAGGGTGGCCTGTATGCCCCTCACGGTTTCTTTTATGTAC Gene GeneID:782442|GPR17:NM_001082470:60_cdna Constitutive 0 NULL GeneID:782442 2 GENE GPR17 NULL G protein-coupled receptor 17 EMBV3_00988 CCAGCAGCGGCTACTGGTCCAGACAAGTGTGCAGGCTCTTCCCACGCAGCGTCTGGTAGT Variant GeneID:789747|LOC789747:XM_002688751:105_cdna 447^503 3 EMBV3_00890 GeneID:789747 7 GENE LOC789747 NULL similar to MHC class II regulatory factor RFX1 (Transcription factor RFX1) (Regulatory factor X 1) (RFX) (Enhancer factor C) (EF-C) EMBV3_04553 TTCTGTTTGAGACCTTACCTACCATGACCATGACCCCCTTGAGGCTTTCCAGCCGCTAGT Gene BVV0101_043409 + 0 NULL GK000025.2:25953612-26060381 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22375 CCTGCCACCTGCTGTGCCCCAGTGAAGACCAAGCCCTTGAGTATGCTATATGTGGACAAT Gene GeneID:530748|NODAL:XM_002698868:466_cdna Constitutive 0 NULL GeneID:530748 28 GENE NODAL NULL nodal homolog (mouse) EMBV3_26214 TCTCACAGTTCTACATCCTGTCGGGCGGCGGATCCAGACTTCAAATCCCAGAAGAGTTTC Variant GeneID:512588|TM2D3:NM_001040518:70_cdna 109^266 1 EMBV3_25922 GeneID:512588 21 GENE TM2D3 MGC133994 TM2 domain containing 3 EMBV3_41922 TGGTGGCCTTCTCCTGCTCATTGCCTCACTTCCACTCACTCCTACATACACTTCTGCTGA Gene GeneID:100301469|LOC100301469:XM_002683981:2_cdna Constitutive 0 NULL GeneID:100301469 Un GENE LOC100301469 NULL similar to olfactory receptor, family 1, subfamily F, member 1 EMBV3_05560 GTGGAATACTCTATCTCTACTACATTCCAAAGACTGTGAACACAACAATACAATTCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27447 GTTAAACTTGTCTCCAGCGCTAACCACAAGGGTGTGGTGTCTTCCTGAAGAACATTGTAC Variant GeneID:520151|ARMC2:NM_001075801:35_cdna 98^214 1 EMBV3_11717 GeneID:520151 9 GENE ARMC2 NULL armadillo repeat containing 2 EMBV3_06486 GGGCGTGTCTACGAAGGTGATGGGAGAAACTCACTAAAATCTGTGGAGTGCTATGACAGC Gene GeneID:530516|KBTBD8:XM_002696961:109_cdna Constitutive 0 NULL GeneID:530516 22 GENE KBTBD8 NULL kelch repeat and BTB (POZ) domain containing 8 EMBV3_19614 TGGTACTGCTGGGTCTGTTTTCCTGTAAGCCTTTGAGCTGTCACACTTAGGAAGGCACTG Gene GeneID:522905|AKAP8:NM_001102072:74_cdna UTR3_Alt 2 NULL GeneID:522905 7 GENE AKAP8 MGC165917 A kinase (PRKA) anchor protein 8 EMBV3_34489 CACCACTTTTCTCACAAAGCCCTAAAAATGGGGGCGGGGATGGAAGTTAAGCTTGTCCTG Gene GeneID:507449|RASD1:XM_002695827:203_cdna Constitutive 0 NULL GeneID:507449 19 GENE RASD1 NULL RAS, dexamethasone-induced 1 EMBV3_31304 GAATGGGTGGATGGAACAAATCTCTGGTAAAGGATTCAGTGGCACCTTCCAGCTCTGTTT Gene GeneID:510194|HP1BP3:NM_001075436:120_cdna UTR3_Alt 2 NULL GeneID:510194 2 GENE HP1BP3 MGC142335 heterochromatin protein 1, binding protein 3 EMBV3_41735 TGTGGTATCTAGTGTGTGTTTCTTAGTAAACATCACTTAAGAATAAAGCTTTCTGAAAGG Gene BVT0101_057598 + 0 NULL GK000028.2:19806785-19821096 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159189 TCONS_00159185 TCONS_00159188 TCONS_00159186 TCONS_00159190 TCONS_00159191 1 XLOC_097370 Coding TCONS_00159189 XLOC_097370 Coding Coding REEP3 28:19782785-19809081 j TSS119343 4460 1 TCONS_00159189_1 217 0.0399103139013453 7 0.830652215250048 6.660759135569e-05 2.61860264541857e-09 5.99668760013865e-05 0.000163728627990249 0.000201834578050945 3.48971069424025e-12 3.36054702269368e-05 1.52230235731657e-27 0.000209088335581187 4.33802490178444e-09 1.42097880693483e-09 2.83344088245221e-11 2.76563143422154e-44 2.95727153895286e-11 4.05101327529289e-05 0.00204431355155719 0.00743816573593099 0.00239723395812159 1.11387701723147e-08 0.000112498030105793 6.87812257110656e-10 0.00133099750994246 0.00163196693627885 0.00597788875364058 0.00026556299523629 0.00055226922725542 7.71702622206137e-05 0.000557906194566633 0.000216105804237451 0.00156311749283334 XM_005226300.1 REEP3 PREDICTED: Bos taurus receptor accessory protein 3 (REEP3), 0.0 7699 100.00 0.95695067264574 NM_001001330.2 REEP3 Homo sapiens receptor accessory protein 3 (REEP3), mRNA. 0.0 2104 77.85 0.57219730941704 TCONS_00159189_1 sp|Q6NUK4|REEP3_HUMAN REEP3_HUMAN Receptor expression-enhancing protein 3; 5e-144 407 94.93 0.995391705069124 1 coding 0 0 0 0 -0.0141501982865291 0.934049213032935 -0.00367997616582769 0.935233719241647 CTCCAGGGTCCCTTCTAGCCTTATAAAAGTGCACTGTTTTGTTTCCAGGTTTTTCCCTTTCATTTCTTTTTGAGAGGATAACCTTGTGAATACAGTTAAAAGGTTCGATGGATGATGTACTGGATTGTCTTTGCCCTGTATACTGTAATTGAAACAGTAGCAGATCAAACAGTCGCTTGGTTCCCCCTCTACTATGAGCTTAAGATTGCTTTTGTCATATGGCTACTCTCTCCTTATACCAGAGGAGCAAGTTTAATATACAGAAAATTCCTTCATCCACTACTTTCTTCAAAGGAAAGGGAAATTGATGATTATATTGTCCAAGCAAAAGAACGAGGCTATGAAACTATGGTAAACTTTGGGCGGCAAGGTTTAAATTTAGCAGCTACTGCTGCCGTCACTGCAGCAGTGAAGAGCCAAGGAGCAATAACTGAACGTTTGCGAAGTTTCAGTATGCATGACCTAACAGCCATTCAAGGTGATGAGCCTGTGGGACAAAGATCGTACCAACCTCTCCCAGAAACAAAAAAGAAAAGTAAACCAGGCTCCGGTGAAACAGCAGGTTACGGAATTCCACTGAGAGACGGGGATGAGAAAACAGACGAAGAAGCAGAGGGGCCATATTCAGATGACGAGATGCTAACACACAAAGGGCTGCGAAGATCACAAAGCATGAAATCTGTGAAAACCGTGAAAGGCCGAAAAGAGGTGCGGTATGGGTCACTAAAATACAAAGTAAAGAAGAGACCACAAGTGTATTTTTAGCCATGTACATATCAAGTATCCCAAGTCAAATTATGCTAATACATCAACTTGTTTTTCTAACATCATATATTCAGGATTTATCCATTAAAACCATGCTTTAAATTGTGGTGGTGATAGGGTTTACTTTCGTCAATTTAAATAGTTTTTCTTTAACAACTACTTCCAAATCTTGACTACTAAAGGTAGTTATGCAAAAGTAGATAGATAGATATATCAGAAATAAAGAAAATTGTGTTATCTGTTGTCAGATTCTTCAAAACACTAAGTGCCTGGGATACAAGGTGAAACCCAGATTCACAGTGTACTTGAAAGATGGTTCAAGCAGCATCAGCCTTTGTGATCTTGTCTTGTGTTTACCTCCATTTCTGTTGTAACTATCACATGAGGATAGTATTTAATAGGCCTCTGATCCAGCAGTGACAGAACGAGGGTATAAGATAAAATATGTTTTATATACTCCTCAAATTTTTACTTTGTTAATACTTCTACTTTTCCCACCATCAACTGAAAGTTTTCAAGACAACTATTTGAAAACCAGGTATCTACACAGCACTTTCATTCCTGACTAGTTTTGCACACTTGAAAATTGTTTACTTATTTTACAACTATACATTTAAGTTTTATTAACACTGTCTTGACTGTCTTGTCTTTATTAACACTGTCTTGACTGTTATTTGTCATATTCTGACTTGTCAAATTTATGCCTTGAATTATATCATCTCTTTTCCTATGGGTTTCATTAGTTATATTCATTTAATTTTAATAATAAAAAATAGAGCTCATTGTTCATTTTCAACTATTTCTACATATCTTTCATACAGATAAGTTCTTTAAAATTTACCAGCTTCCCATATTTAGTTCTACATTGTAGCTGAACTTAGCATGTTTTTGTTAACAGTGGTTTCATTTTCAGCTTTTAAAAATGGTAGCTTTTGCGAAATGGAATCAGAGACCAGTATAGCACGTAGATATCTTCTAATTCATGAAATTAACCAACAGCCAATCTATTAACAAGCTTGGCACTGACACGGGCTGCTGATTTATTAAATCTGGCATTGACTTTACCCATTTGAATCATTTCACTTCTGGCTGAGATAATTTCCTGAAGATCCATGCCAATGCAAAATACAAATGTTGTTAATCTTACATATTAGAAGTTATTAGAATAGATTTTAGAAAAATATCATGTTTTTAATCCAAGAGATTTTGAGTTACCAAACTTTGAAGCTTTTTAGGCATAGATAACTATGCATTATGAACCCCAAGTCAGTATATTTCTGATGATGGTTTTAGTAACCAGTAATCAAAATTGTATCATTATACAAATCTGTATGATTATACTCTTTCATATAATTTAGTTGATTATTCTGTGCACCCAAAAGAAAAAAAAAAAAAAAAGAGAGAGATTTGTGAGATCTTTGACCTTTCTGCCTTTCAAGAAATGAAGCCAGCTGGGAGTGTATATTCAGGACCCACTCTGAGTGTTGGTAAAGAACAGAATGTTTACTCAGGAGTACCTTACCATAATTCATACATTTCTCTTCATGCAAGTCTTAAAATGTCTTCCAGATTATCTCACATTCTCAATAAGTAATACCATGTAAAACTTCATTAAATTTATTTTCCCCCAAAGTTTAATTCTGAGTATCTTCATCTATTTTAACCTTGACTAATTCAAAATTCCTATGAATTCTGGTTATAAACTCTGGAAGAGAGTTTAACGTAGATTGCCTAGAACACTTGACTTCCCAATATAAATGCTACGTGTGCCTTGCTTACCTTTCCTACACTAGGGCAGTGTCATCTCAAATTGCCTAACAAGGTCATGTAAGTGACTTTGTATCAAAAACATTACTTTTGGGGGCCGATTTGCACCACTTTATTTTATTTAAGTCTAATTTCAGTCTGTCTGCAGTGCAGGAGACCCGGGTTCGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAATGGCAACCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTGGGATACAGTCCACGGCGTCAGACACAACTAAGCGACTTCACTTTCACTTTCACTTTGCAGTATTACACCTATGCTTTAATTATCGTAAACTCACAAATACTGTCCTAAATTGGAGGAATTATTTATCCCTCTACACTTCTAGAGTCAAAACGTTTAACCAAGAGCAACACTAGTTTCAAAGAGATGATGCAAATCCTTCTATTTAATCATATCTCAAGGCTTCCTCTCATACGTTTGTTATAACCTTACATACAGTCAATGTCGTTTCACTGTTCTGTCATTTCCTTTCTGTCCTTTCATTTCTTATATTTTGCTTCTTTTCTCTTCTGTGTGTTTTAGCATGCTTTCATTTGAATTTTGTATAATAAACTTGTACTTTTTTTTTCTTTTAAGGTGGAACAGGTCATTTTTTTGTTTCTCTGCTTTTAAATCTAATGCTTATAAAAGAGGTGTGTTTATCCCTAGACCACAGTGCCTTGCACCCCACCACCACCATTTGGTAAATGGGCATTAGATGCTGCACAAGCCTTTAGGGCACTATTTTGGTAGCTATAAAAGTTTATCCAGAAACTGTACCTGGTGTCTCAGTTTATTGTCATTCAACTTGTTCATGAATATTAACTATTTCCAGGGTTTGTTTAGAAGGAAGAATTGATCTGTTCTTTAGTTTACTATATTTTTTTTTTCTGGTGTAAAAATGAGCCAGAAATAAGCCTTATTGCTAAGTAATTATATAAACCCACATAATCCCTGCATAAGATTCCCTCCACACACTTCACTATATGTATGTGGATTTGGATAGAAAATGATGTTGCCAGCATTACCAGTTTTAAATACTTGACTATACAGATTGATGGAATAAAATTATTAAAGTGTTTTCAGGGAACTTAATCCATATGTCACCACCAAAGATTTCTACAGTGTTATAAGGTATGTAAATATTCCAAATTTCTGTAAACATTGGTTAGATAAAGAGTTTTTCTCTTTTTTTTGGAATAACACAGTTTGTACTCTGGAATGCTTGAACTTTTGTGTTATTAAAAATAATACAACACTATCTTAAATATTAGTAATTTGTATTTTTAATTGGAATGGGCTAAATTTTTATTTTGATTTTCTTTTATCAGGAAAATAAGTTAATATGTACTGAAAAGCAATTTCCTATGTTTTCTTCTGTGTAAGTTGATTCATTTACAAAGCAATTTGGTAAATTTTGAAAAGGTTATTGTGGTATCTAGTGTGTGTTTCTTAGTAAACATCACTTAAGAATAAAGCTTTCTGAAAGGAAAGTACAACTTTTACTCTCTTAATGTTTTTAAGATTATTTTGGTAGTTTCCTACAGATTTAATGTATATTAACCCTTTAAACATTGACCATGAATTAACATTTTCTTTTATAACACCTTTTAAATCTATGTACTTCAATAGTTAAGAGAAAGCAGTTTTGCAAGTTTTAATCTCTTTGTAAAAGCTATCTTTAGGCCCAGTATGAGGATAATTTTACAAATGTGTTTTTTGAAAACTTTAATATAAAATAAACTCATTTTACTAGTGATAGTGATAACTTGTATTTTTTTTCTGTGTCTGTCAAGTGTATATGTTAGGTTGCATGAAATGATATTATTTATTACTGAGTGTGTCTTGATTAAATAATAGACAATATATGCAC EMBV3_15660 CCTTGTTTGTCTTAAATGAAAATAGCGATCTGACGTGCAACTGCTTGGGCCACTTGAAAC Gene BVV0101_011617 - 1 EMBV3_35403 GK000020.2:63677448-63975011 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118060 1 XLOC_072226 NonCoding TCONS_00118060 XLOC_072226 NonCoding NonCoding - 20:63775552-63776094 - TSS88528 542 1 TCONS_00118060_1 53 1 0 0 0 0 0 0 0 0 0 0 0.000136643977671777 8.44717111449298e-06 0 6.88205922163773e-05 8.67895787409776e-06 0.000108624450835598 0.000389839069670107 0 0 0 0 0 0 0 0 0 0 0 0 8.95686350601478e-06 0 0 noncoding 0 0 0 0 -0.0639880900633468 0.583806762440272 0.00770192077677595 0.891553652010555 CACTTTCAGTTCAAGCAGATAATAGCTTAACTTGTGTACCATTTAAATAACTTTTCCTCTATGTCTGTGTTTACCCCAGAGGAAACAGGGATTTTGTACACCCAAAGATTTTTTTCCTTGTTTGTCTTAAATGAAAATAGCGATCTGACGTGCAACTGCTTGGGCCACTTGAAACAGATTTCTTTTTCCTTAAGTTTCTTTCTTGCAGAAACTTTGCCATGATATAGCAGCTCATCCATGGTGCTACATTAGTCATGCTAATTCTCTACATACTCATGGAACCCTTGGGGTGATGAGCTGGTACCCGCTTTTACATGCTTTTACATACTTTGCTTAACAGGGAGAAGATGGATGATACTAATCATTTTATGTCTTTTACAAATTGCACTAACTTAATCGGTTGTTTTAATGTCAAGCAGCTGTGAGATTCCTGCTGCGAGCAAAGCCTTTGGTCTCCTGGGTGGTAAAGCTTGTTTTTGTCCAAAAGAAGTTTTGGGGATGTTCAAAACTTGATAAAAATAAACCTGTGCTTTTCACTGCCG TCONS_00115230 . 5' 2648 TCONS_00115230 . 5' 2648 EMBV3_29709 CAATGAAGTCACTCCAACTGAGGCTGCCCAGCCCCCCTTTCCTGCCCGAGGCTCCGGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05846 ACCGCTACGACATGGGCGCGCTGCAGTACAGCCCGATCTCCAACTCGCAGGGCTACATGA Gene GeneID:618135|SOX1:XM_002691994:96_cdna Constitutive 0 NULL GeneID:618135 12 GENE SOX1 NULL SRY (sex determining region Y)-box 1 EMBV3_00496 GAAGAATTCTCATTGTCTAAGCACCCTCAGGGAACTGAAGTCAAAGCAATAACGTACTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25125 GGCGAGACCATGACTGAGGAGCAGTCCCATAGCTTCCTGGCCGAATTCATCAACTACATT Gene GeneID:511144|DDRGK1:NM_001075498:988_cdna Constitutive 1 NULL GeneID:511144 13 GENE DDRGK1 C13H20ORF116 MGC139255 DDRGK domain containing 1 EMBV3_26931 CCTTCCACTTGACCTTCTGTAGATCCAACATCATCAACCATTTCTACTGTGCTGACCCGC Gene GeneID:511623|LOC511623:XM_002693692:353_cdna Constitutive 0 NULL GeneID:511623 15 GENE LOC511623 NULL similar to olfactory receptor 1029 EMBV3_16681 CCCTAACTGGGGAGTTGCTCTAGGCTGGTGTATGATTACTTTCTGCATTATCTGGATTCC Gene GeneID:511661|SLC6A14:NM_001098461:2_cdna UTR3_Alt 2 NULL GeneID:511661 X GENE SLC6A14 MGC151531 solute carrier family 6 (amino acid transporter), member 14 EMBV3_39064 AAATGGAATCCTCTCCATGGAGATCTTTGGTACACCAAAATTTGACACAACTGAATTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02037 ACCTTTGGCTGGAGGTGAGCTGCACTGAAACTTTACAACGAAATGTCTCTGGACAAGGAG Gene BVT0102_115666 + 0 NULL GK000010.2:69318966-69458817 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017730 TCONS_00017732 TCONS_00017728 TCONS_00017729 TCONS_00017731 TCONS_00017733 1 XLOC_009093 Coding TCONS_00017728 XLOC_009093 Coding Coding OTX2 10:69456442-69465442 j TSS12053 3926 1 TCONS_00017728_1 289 4 0.564173797088565 9.23315709504574e-06 2.36535021981298e-10 3.22165312043302e-09 9.07543525313061e-11 4.21876873002712e-05 2.39310411397266e-06 4.08538021985517e-06 0.000123016522090966 7.82275573568051e-14 6.58350804593677e-12 9.86977983885329e-09 9.68025331714284e-11 1.66493041380832e-48 0.000529723972112689 0.000194955700202523 0.000681011198947953 0.000196102832476954 0.00266372527617639 6.46035064795998e-12 5.63553873369375e-06 2.65585359828026e-09 0.00178665771706931 0.00121075247221128 0.00235290932918149 2.0861833186052e-11 1.01994736190993e-05 2.9922526328925e-12 1.93365320371887e-08 1.54326981092705e-10 0.000913855750436159 XM_005211840.1 OTX2 PREDICTED: Bos taurus orthodenticle homeobox 2 (OTX2), transcript 0.0 3653 100.00 0.515537442689761 NM_172337.2 OTX2 Homo sapiens orthodenticle homeobox 2 (OTX2), transcript variant 2, 0.0 3144 94.59 0.515792154865003 TCONS_00017728_1 sp|P32243|OTX2_HUMAN OTX2_HUMAN Homeobox protein OTX2; 0.0 592 98.96 0.996539792387543 2 coding 0 0 0 0 0.0229251110529372 0.910362089901209 -0.000326593904540193 0.995681516787277 GGCTGCGGGACTGCGGGGCAGGGACGCCGCCGGACCGAGTCACTCGCGCCTGGAGGTGTGGGCGCCGAGCGGCTGCGGGGACTCGCCGCGCGGCCGCCGCCCGCTCCTTCTATAGTTCCACCACTCCAAACCCACCCACCAAGGACTCTGAATCTGTCCAACCCGGGTGAAGCAAGACCTTCCGGCTGGGTCCCCCGGATTTGGGCCGACTTTGCGCCTCCAAACAACCTTAGCATGATGTCTTATCTTAAGCAACCGCCTTATGCAGTCAATGGGCTGAGTCTGACCACTTCGGGCATGGACTTGCTGCACCCCTCGGTGGGCTACCCGGCCACCCCTCGGAAACAGCGGCGGGAGAGGACGACATTCACCCGAGCGCAGCTAGATGTGCTGGAAGCACTGTTTGCTAAGACCCGATACCCAGACATCTTCATGCGGGAGGAGGTGGCGCTGAAAATCAACTTGCCTGAGTCCAGGGTACAGGTATGGTTTAAGAATCGAAGAGCTAAGTGCCGCCAACAGCAGCAGCAACAGCAGAACGGAGGTCAAAACAAAGTGAGACCTGCCAAAAAGAAGACATCTCCTGCCCGGGAAGTGAGTTCAGAGAGTGGAACAAGTGGCCAATTCACTCCCCCCTCTAGCACCTCAGTCCCAGCCATTTCCAGCAGCAGTGCTCCTGTGTCTATCTGGAGCCCAGCTTCCATCTCCCCACTGTCAGATCCCCTGTCCACCTCCTCTTCCTGCATGCAGAGGTCCTATCCCATGACCTATACTCAGGCTTCAGGTTATAGTCAAGGATATGCTGGCTCAACTTCCTACTTTGGGGGCATGGACTGTGGATCTTATTTGACCCCTATGCATCACCAGCTTCCTGGACCAGGGACCACACTCAGTCCCATGGGTACCAATGCAGTCACCAGCCATCTCAATCAGTCCCCAGCTTCTCTTTCCACCCAGGGATATGGAGCTTCAAGCTTGGGTTTTAACTCAACCACTGATTGCTTGGATTATAAGGACCAAACTGCCTCCTGGAAGCTTAACTTCAATGCTGACTGCTTGGATTATAAAGATCAGACATCTTCATGGAAATTCCAGGTTTTGTGAAGACCTGTAGAACCTCTTTTTGTGGGTGATTTTTAAGTATACTGGGCTGGACATTCCAGTTTTAGCCAGGCATTGGTTAAAAGAGTTAGATGGTATGATGTTCAGACTCATCTTCTGATCAATGTCCTGGGAGGCATAGAAGGAAAATGAAAGGCCTTAGCGGGGCCTACCAACCAGCTACCTGAAATGGACAAACCAATCTACTTAATACTTAAGATCCTGTTATAGTTTTAGATCATTGGTTTTCCTGATTCACAAAGTGATCGAAAGCATTCTAGCCATGTGCAACCAAATACCACCAAAAATAAACAAGAAGAACTAAATTGTGAGGGGAAGGAAGGAAGGACATAGCCTTCTTAAGCAGAGGTGTTCCAATGTTTTAGCCAATCCTTGGTTGAATCTTAGGAATGGACAGTGTCTCAAGCTCACTCACGTTTCAAGACCAACTGGTAGTTGGCACTGAAAAACTTTTCAGGGCTGTGTGAATTGTGCGACTGATTGTCCTAGATGCACTACTTTATTTAAAAAATAATGTTCATAAGGAGTCAATATGTAGTTTAAGAGACAATCAGTGTGTGTCTTATATAAATGGTACATCTGTGGTTTTTAATCTGTGCTAGACTTCAAAACTGTGATCTCCTGTTATTGTATGCAACCTTGAACTCCACCTCTGCAGGGGTTCTTCTGTGATTAAATAGGTTATAATTATAAATAAATTCAGAGCAACTGAGTACTTATCTAAAAAGATTACCTTTGGCTGGAGGTGAGCTGCACTGAAACTTTACAACAAAATGTCTCTGGACAAGGAGAGTAAGAGAAGAGAAACAAAAGGACACTAATTCATCATGTAATTTACTGTTGGTAAACCTAGCAGTAAAGAGACATTGGTCAATTGCTCTGACCCTGATGAATTTATAAGCTGAGATCATCGTTGTTTATGCTTGCAGATGTTAACTGGAAAAGTTATATATGCATAAACCTTTCTTCCTGATTTGGCAGATATGTATAATTATATTAAATTGGTTCTAGCACAACATTGGGTCCCGTTTAATTTTATACCACTATTAGTGAATGAGAAGCCCACATTCAGCCACTCCTCCCCAAAATATGTTTTTCTTGGATCAGAGAGGGAATTAACAAACTTTTTTTAATTGGGGGGGTGCTAAATATGAATGACTAAGATATGAATGATTGGTATGTAAACTTTTTGTGACTTTCATTAATACTGCTCTGAAATTGAATATAGAGAGCCTAACAATCAAAACCCCTCCTTGGTTTTCCCTCCCTGCCAGATACCCTAATGATTTCTTAGGCACCTTACTAGTATGTCTTAACATAGATCAATTTTTTAAGCAAGAAGTGACAAACTGTAGTACCTCAGAGAAAATGTGAATGACAAGAATCCCTTGTTTCTATTCTCTTATTTGATTAAGGGATTTTTTTTTTTAAGTTCCAAAAAAAATCTGAGGTAAACATGAGAGGGAATGTAATCAGAATCTGAAAGCAATTCAGGCAGAAATGATTTCTGAACAAAAGAGTTTCAGAAAAGTTCTAAAACGTATAATTTCAGTACTTGAACATAAGGCACTCTGGTCTTTTTTTTTTTTTTTTTTAAAGAAAGTGCTAAAGGGGAAAAAAAAAGTCCCTTCTGGCTATACCTGCATTTTGTAAACCAACCATGAGAAAAGACTAATGGGCCAATGATTATGGTGCTCCTCAGATAAAAGCAATATTTAATTTCATTTTACACTCGTTATGCTCTTAAGTTTGACCAAAATGAAGTGACTCTTGACTGTAACTTTTTGAAAATGAACATTAGCAGTTGCAACCATTTTGTTTTCTGGCTAATTTTCCCTGACTGCGCATGCTCTCTGGAGCCCTTACATGATCTTGTCTAATAATTGTTTTTGTTTTGCTGGTAAAGGAAATGGAATAGTTTACAGTCAACAAGTGAGGCACAACTCAATGGCAAGATTTTCCAGTTCTTACTGATAATATTCACCCTACCATAGTTTACACTGGAGTGAGATTGGGGTAGGGGGAGAAGACACCAACATGAATCCTTAATATAGTCCAGATACTGGGTCCTATTCTCCCAGATTTTCTCATGCAGCAGTAAAGCAGACCCAAAATCACTTCTCACACTGCCTTAGGTTTTCAGAATGCCCCACAAAGGGACAGAAAAGAGCACCGCCCTCTCGCCCCAAAAAAACAATAACGACGACAAATAGCCGAGTACTCGGCAAATAAATGCAATTGGGTTTCTCTCCCGGTAGTTTTAAAAAGGAGGAAGTCAGAAAAAGGCGCTGAGCCCCCTCTGAAACTAATTTTTCCATCACCTTTGCACAACTCCGTTTAACAGACCACGGAGTTAAATCCCTTTGAATTGACGGTGAAGTAGCAATGAATTCCCCATGACCACAGGCAAGAGAAGGAGGGTCTGGGAGGCGGGCAGCTAGCGCGGGCTCCTTCGTCCAGAGTTCTGGTCACCGCGCCCAGCCAAGACCCGGCTTAATAAAGTTGGTACCGAAATGATGCCACCCTCCACAGGCGTCAGGGAGCTATTTCAACTGTCTGGAGACCAACAAAGACTTGGACGTTGATGTAATCTTCGTTTTGAGGGGTGCAGGTGAGGGTGGGCTAGTTTGCTTTACAAAGATCCGAAGTCCCAAATCTTTATCTTTCCCGCAAAGATTCTGGGCCCTTTGTATTTCACCTTGGGAGTGTTTCGCCCCTTCAAAGATAAGAGAAATCCAATCAAGTCAATTAAGTTCCGGCTTTCGAAACGTCGGAGTTTGAGATAATGGTCAGTTTCCTCCACC EMBV3_01910 GTCTCTCGAGGCTGCCTCTGGCGCGAGTCAAAGCCATCTTCATTCTGGCACGCGCCGCGG Variant GeneID:613730|POLE4:NM_001101225:57_cdna 172^216 2 EMBV3_13818 GeneID:613730 11 GENE POLE4 NULL polymerase (DNA-directed), epsilon 4 (p12 subunit) EMBV3_14397 ACAGACAGGTCAGATGGTGCCACAGTCGCCTTTACTATGGTTTCTATCACTCAGACAGGC Gene GeneID:508269|TMEM106A:NM_001014870:82_cdna Constitutive 1 NULL GeneID:508269 19 GENE TMEM106A MGC137678 MGC20235 transmembrane protein 106A EMBV3_20809 ACAAGCGAGGTGTGTGTTGATACTGTCATGATGTACCTTGGTGTGGGGGGTTGGAGGACA Gene BVT0102_127533 + 0 NULL GK000003.2:111431174-111481701 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180207 1 XLOC_109977 NonCoding TCONS_00180207 XLOC_109977 NonCoding NonCoding - 3:111477342-111479139 - TSS134966 1797 1 TCONS_00180207_2 95 0.114079020589872 1 0 0.00427401500872698 0.00377911766375841 0.00419185638120993 0.00487528417224658 0.00283194192677868 0.000662860059692054 0.00138734718864663 0.00211146448155017 0.00266736721509191 0.000147682321629363 7.64335844129061e-06 0.000115906442383148 0.000390793084928517 0.000643516410641502 0.000287582669100879 0 0.000840739363696214 4.88691454641264e-05 0.00506395197094005 0.00741353300567716 0.0017791516624668 0.000158270078191944 5.9102626390228e-05 0.000186584793339209 0.00520310804444906 0.00377103620390792 0.0026335437780421 3.47432359410455e-05 9.59032917631225e-05 2.67656574497426e-05 NM_001083738.1 GJA4 Bos taurus gap junction protein, alpha 4, 37kDa (GJA4), mRNA. 2e-132 477 95.93 0.160267111853088 0 noncoding 0 0 0 0 -3.00871983823848 0.0183721741880818 -0.272419668738338 0.00977283114882779 NNTGGTCTTTTTCACCTGGTTCAGAGGGATTCGGAGCCTAAAAAAACCCCACCCCCACCCCCACCCCCGTGGCAGATTCACCTCCACCCAGGTTGTCTGCACGCCCTGTCCTCTCAGGAAAGGCTGGTGGAGGCTGCTGGGTCAGCCTTGATCACACACACACACACACAGACTCACACACACACAGCCTGTGCTGCATCTGGCCCTGTCAAGGGGAGTGGGGTCTTGTTCTCATCACTCCTTCCTACTTCCACTGTTTATCCTTCTAAAATAAACAGGACTTGATCACAAGCGAGGTGTGTGTTGATACTGTCATGATGTACCTTGGTGTGGGGGGTTGGAGGACAGTTGCTTTGCCCAGGGTTCCTTGCCTCTGCCTTTGGCCTCTGCAATCCCAACACCAGCCAGTGCCTTAAACCCTCAAACTCCTATGTACCAGCTCTCAGCAGCTCTGAGTCCTGAACACTCTGCCTTCTGAAATGCCTCAGCACCAGCCTCTTCTTTCCATCCTCACTGTCCCAGCCCCTTCAACCTGTCCATTAATCAGTGGGCTAAACAGTGTCTATCCTCATCCTGCCCCCCGGCCATCCAGCGCCCCGGCCATGCTCCCCACTGCAGTGTGCTTCCTTACTGGACACTGCTCCTCACCTGCCCTGGGCTTCCCTGGTGGCTCAGAGGGTAAAGAATCTGCCTGCAATGTGGGAGACCCGGGTTCAGTCCCTGGATCAGGAAGATCCCCTGGAGAAGGGAGTGGCAACCCATTCTAGTATTCTTGCCTGGAGAATCCCGTAGACTGAGGAGTCTGGCAGGCCACAGTACAGGGGCTTTGCAAAGAGTCGGACGTGACTGAGCAATTAACACTCTTCACCTGTCTGCCTGCCAGCCAAGCCCTTCAGAGTCTGGCTCAAGTGGGCCTGCAGTCCTTGGTGTTTGGGGAGGCTGGTTTAGACCACTTACCCCTGCTGCCTTGGCCCTTTCTTGTCTGCCCACCAGAAGGAGCAACTTAAGGACCTGCATCATACCTCCTCCCCATGCACCTAAAACTCAGAACAGACAGTGGTCGTGTAGAGAGGTGCACGGGACTGTCAAGGTCCAGTGGAGGAATGGAATCTTGCCTCTGAGTCACAAAGGTTTCGGGGGTGGGGGGGGGAACAATTGAACTGGATCTTGACAGATAAAATAGAAGTCTACCGTGAAGGGAAGAGGACGTCTTATTTAGACAGAAAATTGCGCACAGGCAAGAGGAGGGGAACCACTGAGGATTAAGGGGGTGCTCAGGGCCTGATGAGCCATCTGGGATGTGGGAGGTACAGCTGATGAGTCCAGTGCTGGCAGAGATGACCTTCCATGTGGAAGCTGACCCAGATGGAGGGAACACTCAGTGGCCCTTGAAGGAAGCTGGTTGTCTCCCCTACCCAGGGAGGTATGGGGCTGGGCTTTTAGGAGGGAGTGGGGTCCATCTCATGTGGCCACACACTTCTCCTTGAGAGCCTTTACAGCAGGGGAGCAACTTGGCCCTTCCCACCAAGGTAGGTCTTCAAAGCACCAGCTCTGTATCCTTGACCCCAGGGTTCACTCACTCACTGCTTACCCAGCAAGTCTGAATGCTCAGCCTGATAAGTTACAGTCCTCACTCTTCTAACTTTGGTTCCCCTTGTTCCCTCTGAATTCCCTGAGATCCAATCAGACCAGCCCTGTCATAGTTCCCCAGACTCACTGGGTAGGTTCTCATCCTGGTCCTTTGCCAGCCTCTTCCCCAACACTTCCAAACCCCACCAGTCCTTTAAACACAGCTGT TCONS_00174761 . 3' 2561 TCONS_00174761 . 3' 4357 EMBV3_40074 GTGCTGGGATGCCTGACCTTACTTGCTGGGTCAGTTCCTCTGAAAGAGATGGACCTTGTA Gene GeneID:506470|LOC506470:XR_084575:316_cdna Constitutive 0 NULL GeneID:506470 13 PSEUDO LOC506470 NULL similar to Transcription factor COE4 (Early B-cell factor 4) (EBF-4) (Olf-1/EBF-like 4) (OE-4) (O/E-4) EMBV3_17514 CTACTGTAGCTACCTCCAGCTACTATTTGGGGCCCCCGGATCAGATATCCTCAATATGAG Gene BVT0102_071925 + 0 NULL GK000019.2:3973006-4279462 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251625 TCONS_00246740 TCONS_00218428 TCONS_00175509 TCONS_00061487 TCONS_00118459 TCONS_00210913 TCONS_00061482 TCONS_00165977 TCONS_00250203 TCONS_00176420 TCONS_00061490 TCONS_00123823 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00061485 TCONS_00196823 TCONS_00118491 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00174805 TCONS_00170890 TCONS_00171428 TCONS_00061483 TCONS_00010280 TCONS_00231489 TCONS_00061489 TCONS_00174806 TCONS_00118487 TCONS_00125692 TCONS_00061488 TCONS_00207485 TCONS_00006385 TCONS_00000529 TCONS_00170891 25 XLOC_154566 XLOC_151107 XLOC_131748 XLOC_105290 XLOC_036985 XLOC_072622 XLOC_129423 XLOC_100817 XLOC_153146 XLOC_106198 XLOC_075375 XLOC_104695 XLOC_118488 XLOC_072644 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_103679 XLOC_103815 XLOC_005831 XLOC_140978 XLOC_077234 XLOC_126001 XLOC_001948 XLOC_000141 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_37224 ATGCCGGGCTCTTCTGCCGTCTTGATGCCAAGGCTGAAGGCTGCATTGACTCACCACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19770 TCTGGTTCAGCCCTCATAATGAATATGCACCCGATCCTGAAGAACCACAGAACTACCACC Gene GeneID:515749|CTNNAL1:XM_002689910:19_cdna UTR3_Alt 2 NULL GeneID:515749 8 GENE CTNNAL1 NULL catenin (cadherin-associated protein), alpha-like 1 EMBV3_12199 ATAAAGAGTGGAGCGGAAGCTAAGAAACTGTCCATCTGCTGCAAGGAAGTTTGTAGATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10712 TAAAGACCTTAAAGAACAGGGTCTGCGAGAGGGTAAGGACTGATGCAGTGAGTAGGCTGG Gene GeneID:525399|P11:NM_001102090:78_cdna Constitutive 0 NULL GeneID:525399 5 GENE P11 MGC143247 P11 26 serine protease EMBV3_16170 CGTCACTGCCTGGGAAGTTCAAGGTTACGCCAGCGATGTTGCCGATCTTTACTGGGAATT Gene BVT0102_113424 + 0 NULL GK000017.2:10672727-10752465 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074827 TCONS_00074831 TCONS_00074830 TCONS_00074829 TCONS_00074828 TCONS_00074826 1 XLOC_046438 NonCoding TCONS_00074831 XLOC_046438 NonCoding NonCoding EDNRA 17:10735751-10919595 x TSS56593 475 1 TCONS_00074831_2 73 2 0.997427152516006 0.000117709463208087 0.000116216719084718 7.50557273074118e-05 8.62839560929268e-13 0.000913255184754221 0 1.38569319773066e-07 8.86172101907966e-06 0.000691640164894732 0 1.44524052861245e-05 0 0 0 3.49153633960797e-05 0 1.74286807888534e-05 0 7.20525468848368e-05 0.00137035017703552 0.000232651929840039 0 0 0 0.000182266174402474 0.000326367915951319 0.000434436789437675 0 0 0 0 noncoding 0 0 0 0 -0.0459552413767227 0.673191190636727 0.0309703451584631 0.532992457686791 GTGGTGTATACAGGGGTGTGGAGGTGAACACAGGGCTTGGAGGGAGGCGTCACTGCCTGGGAAGTTCAAGGTTACGCCAGCGATGTTGCCGATCTTTACTGGGAATTTCGTTTTGCCGGCCTCAAGTGTCCTGCCCATAAATGATACATCCGCTGTGGTGTGGAAGCAATACCTACCTGTCTCTGTTCTCCTTGACTCTACAGCACATAGAGGAAGCTACTCTCTTATTGGTACCCTACATCTGCCTCCAGGACAACTAAAGATTAAGGAGATCCTTGGACACCTGATGAGATTTGTGAGTTGAACTCAGCATGCTTGAGCATCTCAGTTTGGAACACTAAAAGCAGACACTTGTGCTGTATGTACAGAGTACAATAAAGCCGAAATCAATCTAAGGTGACTATAAGTGAGACTGTGAAGGAGGGTCATCCCGGCTACCAGGTGCAGGGTGGTGGCAGACCCCACGGGCACAAAG TCONS_00076653 r 3' 15292 TCONS_00076653 r 3' 15698 EMBV3_27062 GCGAATCGTAGCTCTGGATCGCAGTTTTCACATTGGCTGTTACAAGTGTGAGGAGTGTGG Gene GeneID:615869|TRIP6:NM_001035469:302_cdna Constitutive 2 NULL GeneID:615869 25 GENE TRIP6 MGC128885 thyroid hormone receptor interactor 6 EMBV3_28603 CCAGTGGACCACCAGGAAAGTCCCCAGAATAGAACATTTTAGCTGGCCTCAATTTCCTTG Gene BVV0102_284290 + 0 NULL GK000011.2:49497941-49507022 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27975 CCAAGCCCAGGAGCCAGGGAACCGACGACCGACTTACATCAGAGGATTGACAGGGTCCGT Variant GeneID:535293|EPHX1:NM_001034629:74_cdna 65^252 2 EMBV3_03173 GeneID:535293 16 GENE EPHX1 MGC126963 epoxide hydrolase 1, microsomal (xenobiotic) EMBV3_38483 ATGTCTGGTAGAGGTAAAGGAGGAAAAGGGCTTGGAAAAGGAGGCGCTAAACGCCATCGT Gene GeneID:518961|LOC518961:XM_002697510:217_cdna Constitutive 0 NULL GeneID:518961 23 GENE LOC518961 NULL similar to Histone H4 replacement CG3379-PC EMBV3_00630 ATTGCTTATGAAATGGAAAGCCGTCGAACTCAGCTTCAGTCAGAGGAGATCGTGGCCGAG Gene GeneID:100300968|LOC100300968:XM_002684766:267_cdna Constitutive 0 NULL GeneID:100300968 1 GENE LOC100300968 NULL hypothetical protein LOC100300968 EMBV3_02242 GAGCCTCGAGTCCAAAGCCGAAAGAATCGCCAGCAGGTCCAGAAAGGACCCCGAGGCTGC Variant GeneID:281509|SVIL:NM_174190:7_cdna 517^606 1 EMBV3_30663 GeneID:281509 13 GENE SVIL NULL supervillin EMBV3_10543 GAGTCTCCTGGAAGTATCTGGAAGTAGCCTCATCTGCATCCCACCGTCTGTGCACGTGGA Gene GeneID:512879|LRRC24:NM_001083678:77_cdna Constitutive 0 NULL GeneID:512879 14 GENE LRRC24 LRRC14 leucine rich repeat containing 24 EMBV3_34806 CTTGTCAGGTGTTGAGCCAAATGACACGACCAAGCCGAAAATGAACGAAAGGAAGGGCTG Gene GeneID:618720|TMEM161A:NM_001098144:68_cdna UTR3_Alt 2 NULL GeneID:618720 7 GENE TMEM161A MGC138998 transmembrane protein 161A EMBV3_08516 TCAGCCTGGAGGAGACCATTAAACAGCTAGAGGAGGTGGAGGAGGAATTTTGCCGCCTGA Gene GeneID:513377|ARHGEF1:XM_002695075:488_cdna Constitutive 0 NULL GeneID:513377 18 GENE ARHGEF1 NULL Rho guanine nucleotide exchange factor (GEF) 1 EMBV3_05756 TTACCATAAGTGTCTGTATAGCAACCATCAAAGCCGCTCCTCCCTTAGTGGTCCCCCTCT Gene GeneID:540889|PHF13:XM_002694107:421_cdna UTR3_Alt 2 NULL GeneID:540889 16 GENE PHF13 NULL PHD finger protein 13 EMBV3_03009 TAACAAGCCAGCCTTTGGTGAGCTTCTCGGTGCCTGCTGATGAACTCTGAGATCCCAATA Gene GeneID:506661|GPR6:NM_001100307:8_cdna Constitutive 0 NULL GeneID:506661 9 GENE GPR6 NULL G protein-coupled receptor 6 EMBV3_39045 AGTTTGTGCCAGACTACCAGGCTGAAAGTCTGCCTATGATCAGAAGCCACAAGTGGGAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38423 GCCAGCTTGATATTTGGGAACCCTTTTCCTTGGCTGTTGTTTTCTTCGGGTCTGTGTCAG Gene GeneID:509625|TERF2IP:NM_001075412:88_cdna UTR3_Alt 2 NULL GeneID:509625 18 GENE TERF2IP MGC140687 telomeric repeat binding factor 2, interacting protein EMBV3_31563 CTCTTTCCTTGTCCAAATACTGGCATATGGTGCTACTCTGTGATGGAGGGGCAGAAGACC Gene BVT0102_106186 + 1 EMBV3_08291 GK000002.2:104560644-104589104 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19117 TCTTCCTTAACCTCCACTAACCTGTGTGTGCTGTAGTGACCAGCGGCTCCTCCCGTATCT Gene GeneID:617416|FAM125B:XM_002691585:121_cdna Constitutive 1 NULL GeneID:617416 11 GENE FAM125B NULL hypothetical protein LOC617416 EMBV3_36135 CTTTTTGTTTGGGAAGGTCTCGGGTAAAACATTGCGACTGTGCCTTCAGCTGCCTGTGTG Gene GeneID:534400|CEP120:NM_001078000:20_cdna UTR3_Alt 2 NULL GeneID:534400 7 GENE CEP120 CCDC100 MGC142331 centrosomal protein 120kDa EMBV3_14974 GACTTTCCCATTGACCAGCTCTCCAAGGAGTTAGAGGGAATTGTATCCTGAGCTGAGACC Gene BVV0102_253914 + 0 NULL GK000009.2:45301787-45374226 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237308 TCONS_00237307 1 XLOC_144679 NonCoding TCONS_00237308 XLOC_144679 NonCoding NonCoding PREP 9:45285995-45330196 x TSS177432 893 3 TCONS_00237308_5 51 5 0.979909502262443 1.52303850028604e-05 0.00020253940404036 6.96313154573952e-09 0 0.000120129585696912 0 3.3275238478988e-10 1.32444671676308e-05 1.01826059313514e-11 5.06808778394701e-05 0 0 0 0 1.09862002367205e-05 0 0 0 0 0 0 0 2.05680332335399e-11 1.41155436664752e-09 0.000302587462136357 5.40330020981348e-05 2.32637829700674e-05 1.0752582271387e-05 0 0 0 noncoding 0 0 0 0 GGGGGTAAACTCCTCCATGACAGGTGAGGTCAGGTAACAGCATTCCCAGGCTGAGACCGGACATCAAGAGTAAGAGACTTTCCCATTGACCAGCTCTCCAAGGAGTTAGAGGGAATTGTATCCTGAGCTGAGACCAGAGCAGTGGCGGAGCTGGGGAGTTGCCGGTGTGCCTAGAGACACCAGAACTTAAAAGGCAAATGCCCCAAAGGGAACAGATGGGAACAGATGATCTGTTATGATGTCAGACAACCATGAGAATAAAAACGAGAAAGCATGTCATCAACACGAACTTGTGTTCTGGGAGGAGCTGGACTCACTGACACACGACTTGGAGCAGAACTGAGTCCTCCATGGGCTCCACAGAGTATGTGACGATGGAGGTGAGCTCACTGCCTCTTCCCTGGGAAGATGAAAGTGCTCTGCACAGACAGGCTCATGTCTTACCTCTCCTCTCTGCAGGACTTTGAGATGGAGATAAGAAAGTTGATGAAGACCAGGGGAGGCACTCTTCCCTAACAGAGCTCCATGGACCACCTAAGGAACAGAAGAATTTTACGGTGAAGAACTTGGGTCCTTTGAGAAGGCAACAGTGTCAGGAGTCCATGCAGCACACCAGAGCCTCTGGCCTCAGGAGGCAGAGAAGAACAGTGGGTTTATGGATCTGAAGGGTGGTCTTGGATGTTCTTCCTGTGGAAGAAGGGTCCCCTTGCCTGGTGCTGCCCCATCAAGCCCAGGCACTGGGGTCCGCCCTCAGGCCTGCAGACTGTCTTCTACATGATGGCTGATGTCGAGAGGGGAGTGAAGGTGCCTCCCCCAAACACAGGCATCAGGTAAGGGAAGAGCATCTTCTGCAAGTTATTGATTTGTCTATACATTTCAGATACACACAAGCC TCONS_00235395 TCONS_00235396 TCONS_00235397 r 3' 729 TCONS_00235395 TCONS_00235396 TCONS_00235397 r 5' 266 EMBV3_32088 GTCAGTACTACCTGTCGTCATTGTGGTTAAATGTAGAGAGAACTGCTGGGCAAGATGGTG Gene GeneID:515561|ZNF462:XM_002689904:5_cdna UTR3_Alt 2 NULL GeneID:515561 8 GENE ZNF462 NULL zinc finger protein 462 EMBV3_03532 TCTCTGGAACTCCAACTGCGTGGCCTGCGGGGTGACTCTGGAGGACCCCTCAACTGCCCA Variant GeneID:281752|CELA3B:NM_001166518:21_cdna 381^660 1 EMBV3_34743 GeneID:281752 2 GENE CELA3B ELA3B chymotrypsin-like elastase family, member 3B EMBV3_10965 GCACTAAAAGCTGTGGCTATTGTTGTGCCTTTCCCTCTGCTGGTTGCACGATTTGAGCGC Gene GeneID:510584|LOC510584:XM_002693175:135_cdna Constitutive 0 NULL GeneID:510584 15 GENE LOC510584 NULL similar to olfactory receptor, family 52, subfamily W, member 1 EMBV3_10286 TGCAGAAGCGAATCACCTGGGTCCCCTGCAGGTGACCGCTGACCTGCGGCTCAATGAGCC Variant GeneID:617210|ETFB:NM_001038582:41_cdna 337^567 3 EMBV3_03002 GeneID:617210 18 GENE ETFB MGC134248 electron-transfer-flavoprotein, beta polypeptide EMBV3_22131 CCAGCGATGGGTGGAGGCAGTAACAGAGAAGAATTTCGAGACAAAGGATTTTCGAGCCTC Gene BVT0102_083320 + 0 NULL GK000012.2:51006780-51102450 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035330 TCONS_00035322 TCONS_00035326 TCONS_00035331 TCONS_00035324 TCONS_00035328 1 XLOC_020890 Coding TCONS_00035326 XLOC_020890 Coding Coding LMO7 12:51025355-51222763 j TSS25929 2390 1 TCONS_00035326_4 487 17 0.987979149675543 0.0082111045560049 0.00456360709556901 0.00343819367384412 0.00440226518797779 0.000977398761102715 0.0032336728617989 0.00250527511726864 0.00439370355974624 0.0055626539128574 0.000157860493818875 0.000784028453023785 0.000133908891130484 0.000225220456804342 0.0036054541722867 1.62726921756514e-29 0.00033578357046782 0 0 0.00812980565398157 0.00799700343940017 0.0038131012327489 0.000296339448628267 0.000115064806963111 0.000818161395675418 0.0112081766491113 0.00967036226697639 0.00550818394241332 0.000227440750212834 0.000143134207194281 4.33734507931595e-05 XM_005194179.1 LMO7 PREDICTED: Bos taurus LIM domain 7 (LMO7), transcript variant X19, 0.0 4143 99.70 0.967782426778243 XM_005266394.1 LMO7 PREDICTED: Homo sapiens LIM domain 7 (LMO7), transcript variant 0.0 2648 86.20 0.938912133891213 TCONS_00035326_4 sp|Q8WWI1|LMO7_HUMAN LMO7_HUMAN LIM domain only protein 7; 0.0 616 77.35 0.895277207392197 2 coding 0 0 0 0 0.172772344636701 0.246466425429168 -0.0314834428225611 0.543232020449258 GCGGCTGGCCGGGCAGAGCTCCATCGCGGGGGACGTTCTTGGCCGGGAAAGGTGCAATTGTGTGCAGCTATTCCTGTTCTGGAAGGGATGGAGGAGGCGGAGGCCGATTGCGCCCTGGCGTTCGCCGAGGCCCAGCGATGGGTGGAGGCAGTAACAGAGAAGAATTTCGAGACAAAGGATTTTCGAGCCTCTCTAGAGAATGGTGTTCTGTTGTGTGATTTAATTAATAAACTGAAACCTGGGATCATTAAGAAGATCAATAGATTGTCCACACCTATAGCAGGCTTGGATAATATAAACGTTTTTTTGAAAGCGTGTGAACAGATTGGATTGAAAGAAGCCCAGCTTTTCCATCCTGGGGATCTACAGGATTTATCAAATCGAGTCACTGTCAAGCAAGAAGAGACTGATAGGAGAGTGAAAAATGTTTTGATAACTTTGTACTGGCTGGGAAGAAAAGCACAAAGTAACCCCTACTATAATGGTCCCTATCTTAATTTGAAAGCGTTTGAGAATCTTTTAGGACAAGCTCTGACTAAGGCACTTGAAGAGTCCAGCTGCCTGAAGAGGAGTGGCAGGGACAGTGGTTGCAGCGACATCTGGGGCCCTGAGCGCGGGGAGCTTCTGGCTTCTCCAGGCAGCTGTAAGAGGGAGGACTCGTTTGAGAGCTTGGACTCTTTGGGATCAAGATCATTCACAAGCTGCTCCTCTGATATCACGTTGAGGGGGGCACGTGAAGGTTGTGAAAGTGACACAGATTCTGAATTTACATTCAAAATGCAGGACCATAATAAAGATGACATGTCTTATAGAAGGATTTCGGCTATTGAACCCAAGTCTGCATTACCCTTCAATCGCTTTTTACCCAACAAGAGTAGACAGCCATCGTACGTGCCGGCACCCTTGAGGAAGAAAAAGCTGGACAAAAATGAGGATAACAGACGAAGCTGGGCAAGTGCCGTCTACACAGAAGCAGATGGAGCATTTCCAAGACTCTTTCAAAAGATTTATGGTGAGAACGGGTAAGTCGAGTAAGTCCTTGAGTGATGTCAGCGCAGAGGATATTCAGAGCTTGCGTCAGCTACGTTACGAGGAGATGCAGAGAATCAAGTCCCAGTTAAAAGAGCAGGACCAGAAATGGCAGGATGACCTTGCAAAATGGAAAGATCGTCGGAAAAGCTACACTTCGGATCTGCAGAAGAAAAAGGAGGAGAGGGAGGAGATTGAGAAGCAAGCTCTTGAGAAGTCGGAGAGAAGATCTAAGACGTTTAACGAAATGCTGCAGGACAGGGAATCCCAAAATCAGATGTCTACAGTTACGTCGAGAAGGAGGCTGTATTCTTTTGATGACGGATTGAATGAAGAAAAGCGTCCCCCTGTGCCGCCTATGCCAGAAACCTATTCCCAGAGTGAGAGAGTAGAAGAGAAAGGAACAACTTATCCGACAGAAATTCCTAAGCAGGATTCTACAACTTTTGCGAAAAGGGAGACTACTGTCACAGCTGAAGTCCAGTTTCCTTCTAGAAGCCCCGTGGAAGAACAGCGCCCAGCCTCCTTGTCGTCTCAGCATTCGCTGAATACACAAATGGAGTCGACTCGAGTTTCAGCAACTCTCCCCAGAAGTTACCAGAAAACCGATGCGGCCAGGTTAACCTCTGTGGTCACACCGAGACCCTTTGGCTCTCAGTCAAGGGGAATCTCATCTCTCCCGAGATCCTACACGATGGATGATGCTTGGAAGTATAATGGAGACATAGAAGGCGTGAAGAGAACCCAGAGCAGTTCGATCAGCATCTCTGTGCAAAGACCTGACACACGCCAGCTTGCGTCCGGCTCATCCAGCGAAAGAGAGGCCGAAGCACCCAGAGAAAGTGTGATGCGGTTGCCCTCTCCTACATCCCCCTGCTCATCTCTTTCCCAGGATCAGGCTGCCACTTCTAAAGACACATTGTCTTCAATATCTAGCCCTGATTTAACATCTGAGCTTGGAGAAGGGAGAAGCTCGCCACAGGCAGAGGTCCCCAGGTCACAGGATCAGTTCAGTGATATGAGAATCAGCATAAACCAGACGCCTGGGAGCCGTCTTGACTTTGGGTTTACAGTAAAATGGGCTTTTTCCAGGATCTTCGTAGCATCAGTTGAAGCAGGTAGCCCAGCCGAATTTTCTCAGCTACAGGTAGATGATGAAATTATTGCTATCAACAACACCAGGTTTTCATATAAGGACACAAAAGAGTGGGAGGAAACCATGGCTAAGGCCCAGGAAACTGGGAGCCTAGTTATGGATATCAGGCGCTATGGAAAGTCTGATTGGGGCAAAGACCAGGCTTCCCTGCCATTTACACGGCATAAAACCCTCAATCTCACCAGTATGGCTACCAAAATTATAG EMBV3_37661 GCCTATCGGCAGAACTTTGGGTCACATTAGTACAACCAGCCACTTCCTCATACCATAGTG Gene BVV0102_086484 + 0 NULL GK000013.2:66618268-66628905 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12466 GAATCCAATTCACAGCGAGCACATCGTCACAAGTACTCAGACTATCAGACAGTGCAGCGC Gene GeneID:538070|RFX3:XM_002689615:13_cdna Constitutive 0 NULL GeneID:538070 8 GENE RFX3 NULL regulatory factor X, 3 (influences HLA class II expression) EMBV3_23365 AAGGTACTTGGAAATACAAAAAAATGTATACAGAATATAAATCGGCCATATTCCCATGAG Gene BVV0102_305123 + 0 NULL GK000014.2:19733799-19775098 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051491 TCONS_00051496 TCONS_00051493 TCONS_00051494 TCONS_00051492 1 XLOC_031200 Coding TCONS_00051493 XLOC_031200 Coding Coding HAS2 14:19703427-19735704 j TSS38378 2895 1 TCONS_00051493_3 421 0.0884283246977547 5 0.910459784359896 0.00122086524148323 0.00035767416613946 0.000437148365900953 0.000487463898995111 0.000677798349209534 0.00065070690284791 0.000598672207869677 0.000716370436044393 0.00241830843017539 1.8729054351241e-05 0.000134381156882362 5.01114190766096e-05 0.000305029008277145 0.000746698154110401 8.09732558215564e-18 7.50524033600103e-30 1.57041161976479e-11 4.51967080898801e-13 0.00139103045450799 0.000848103648036578 5.56263798944004e-09 5.96491646964341e-09 2.21358053799378e-20 3.17232755661877e-09 0.000771524418430782 0.00220628556681408 0.000721665336294034 1.20858635222216e-06 3.98896106494605e-05 1.26219980384119e-09 NM_174079.2 HAS2 Bos taurus hyaluronan synthase 2 (HAS2), mRNA. 0.0 3086 99.77 0.59447322970639 NM_005328.2 HAS2 Homo sapiens hyaluronan synthase 2 (HAS2), mRNA. 0.0 2304 89.75 0.584110535405872 TCONS_00051493_3 sp|O97711|HAS2_BOVIN HAS2_BOVIN Hyaluronan synthase 2; 0.0 830 99.49 0.933491686460808 4 coding 0 0 0 0 -0.098256081567974 0.646210130916859 0.0286057556198266 0.536260928565972 TGGCCAATTTCTCTCGCCCTCTCCCCCTCCCCGCCTCCCGCCTGCCCGCCCGCGCTCCCAGTTCCCTCCCCTCCGGTTTCCCAGTCCGCACCTCCCTTCTCCACTCCCCTCACCCCTATTCCCTCCTCCGCCCTATTAAAACACCCACCAGCTCACTTGTTAAGACCCCCTTAAGTTGGAGGAGGCAGAAAGGCAACAACCGCGAGGAAGGAGAAGTCAAGACGTCTGGAAAGAATTACCCAGTCCTGGCTTCCAGCAGCCCATTGAACCAGGGACTTGAACCAGCCCCAGCCAAAGACATTCTCCTGATTCTACGCTTCCTGGGTTCTGCTGAGTTTTCACCAGGCTTTTTTTTTTTTTTTCTCTTTAATACAAAAAGAGAGCAGAGACTTTCCGATATTAGGGGAAAGGAACTAGAGCATAAAATAAAATAAAGTTAATTTATTTTCAAAGCACAGATAACATTTTCTTTTAAGAGTTAGAAGATTGAAGTGCAACGGAAATATTAAAAAATACTAGTGATTTTATTTTAAGTGGGGGAGACCTAAACATTTGAGACTCCCCCATCCTTTTTAAATGTTGTTTTTAAATTTTTTATTTTTCTTGGCCGGTCGTCTCAAATTCATCTGATCTCCTATTACCTCAATTTTGGAAACTGCCCGCCACCGACCCTTCAGGACCACACAGACAGGCTGAGGACAACTTTATGACCAAGAGCTGAACAAGATGCATTGTGAGAGATTTCTATGTATCCTGAGAATAATTGGAACCACACTTTTTGGAGTCTCTCTCCTCCTTGGAATCACAGCTGCTTATATTGTTGGCTATCAATTTATCCAAACAGATAATTACTATTTCTCTTTTGGACTGTATGGTGCCTTTTTAGCATCACACCTCATCATCCAAAGCCTGTTTGCCTTTTTGGAGCACCGGAAAATGAAAAAATCTCTAGAAACCCCCATTAAGTTGAACAAAACTGTTGCTCTTTGCATTGCTGCATATCAAGAAGATCCAGACTATTTGCGGAAATGTTTGCAATCTGTGAAAAGGCTAACCTACCCCGGAATTAAAGTTGTCATGGTCATAGATGGAAACTCGGAAGATGACCTTTACATGATGGACATCTTCAGTGAAGTCATGGGCAGGGACAAGTCAGCCACTTATATCTGGAAGAACAACTACCATGTGAAGGGTCCTGGAGAGACGGATGAGTCGCACAAAGAAAGCTCACAGCATGTCACCCAGTTGGTCTTGTCCAACAAGAGTATTTGCATCATGCAAAAATGGGGTGGAAAAAGAGAAGTCATGTACACAGCCTTCAGAGCACTGGGGCGAAGTGTGGATTATGTACAGGTTTGTGATTCAGACACCATGCTTGACCCAGCATCATCTGTGGAGATGGTAAAAGTTTTAGAAGAAGATCCCATGGTTGGAGGTGTCGGGGGAGATGTCCAGATTTTAAACAAGTATGATTCCTGGATCTCCTTCCTCAGCAGTGTGAGATACTGGATGGCTTTTAACATAGAAAGGGCCTGTCAGTCTTATTTCGGATGTGTCCAGTGCATTAGCGGACCTCTGGGAATGTACAGAAACTCCTTACTGCATGAATTTGTGGAAGACTGGTACAATCAAGAATTTATGGGCAGCCAATGTAGTTTTGGAGATGACAGGCATCTAACGAACCGAGTGCTGAGTCTGGGCTATGCAACGAAATACACAGCTCGATCCAAGTGCCTTACTGAAACACCTATAGAATATCTCAGATGGTTAAACCAGCAGACCCGCTGGAGCAAGTCCTACTTCCGAGAGTGGCTGTACAACGCGATGTGGTTTCATAAACATCACTTGTGGATGACCTATGAAGCCGTCATCACTGGGTTCTTCCCTTTCTTTCTCATTGCCACGACATCTATAGTCCATCCATCCTGCCTAAGAAAAAACTGCACGTTCTACCTTCAGAGTACAAAAAGGTACATAACTTCTACAACGTAGACTCTCACTGATTGGAGAGCTTGTGGGAAACAGACAGACCATGCCATTAAATAAGACTAAAACTTGAGTTTGCCTTTTTAATTATTTATGTTCTAAGTTAAGCTTGATAACATTCAGATTCTCTCATTCTTATAAAAGATTGAATTAATTGCCTGTATTTATTTTAGCAATTATTCAATGTATTTCCAGTATAGGATGTATAGTATAATTGAATTTTTTTGTAAATAAAATATTTTTGATAAGATTATTGCCTTTTTTTCTAAGGGAAGGGGGAATTCAAACAGAACAATGTTTTATTTTGATTGTAAGGGTATGGATTTAAGAATGGGGTATATAGAAATATAAACATTGTTAGTCAACAATAGAGGTCATTTAATGTTATTAATCAGAAGGCAGAAATCTCTAGAGTTGGTATGGTTGGGAATCTAGAAAAATGAGAGAGACAGTCCCAATTAATACAACTTTGTCTTTCTTGAATCTTCTGCCTTGTCCCTGAAAAGAGCCCTAATTTAGACAGAAGTTGTTTTACTATAGTAATCTATAATAGTGGGAAAAAAAAATTTCAGAAACATAGGCAAGTTTGTTATAGCATTATTTACAAATAATAACAAAATCTTAACCTAATTTAAGATTTAATAATGTGGGTAATAATTAAATGAATTATGGCATTTCCCAAACAATGGACTATAATTACCCATTAAACATAATGTTCCTAGAGAATATGAGGCTGTTGAAATGTTACATTTAAAAATACAACCATTTTGTACGATAATACCCTGATTTTGTAAAAACAAAAATGTTAAAACATGGTTATCTCATGGGAATATGGCCGATTTATATTCTGTATACATTTTTTTGTATTTCCAAGTACCTTAATTATGTATTGCTTTTATGATCAGAAAA EMBV3_27168 TGCTTCCTCCACATTCCAACCCTGGCACCCACCACGCTATTCTGTGCTTCTATGAGTTCA Gene GeneID:280801|GAT:NM_177486:2_cdna Constitutive 0 NULL GeneID:280801 15 GENE GAT NULL glycine-N-acyltransferase-like EMBV3_24895 CACTCTCTTCTTCATGTACGCCCGCACCAGAGTGGCCTCTTGCATCAGCTTCAACAAGGT Gene GeneID:511777|LOC511777:XM_002693758:3_cdna Constitutive 0 NULL GeneID:511777 15 GENE LOC511777 NULL similar to Olfactory receptor 6Q1 EMBV3_39991 AAGCCAGGTTTCTCTTGGCCTCTGCTTCTTGAGCACAGAATGGCTCCTGCTTCACCAAAC Gene GeneID:100296999|LOC100296999:XM_002691836:94_cdna Constitutive 0 NULL GeneID:100296999 12 GENE LOC100296999 NULL hypothetical protein LOC100296999 EMBV3_29524 TAGAGATGAGGAAACTAAGATTCACAGAGATGAAATCAACTGTCCTCAGTCATGTGGTGA Gene GeneID:526888|EPM2A:NM_001099709:17_cdna Constitutive 2 NULL GeneID:526888 9 GENE EPM2A NULL epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) EMBV3_21544 AGCGGCTGTTTGGGAAGAACAGGTGCTCGAGTTTGGCTCTTCATTGGTTTCATGTTGATG Gene GeneID:615627|TMEM50B:NM_001034786:58_cdna UTR3_Alt 2 NULL GeneID:615627 1 GENE TMEM50B MGC127178 transmembrane protein 50B EMBV3_34775 GGTGCTGCTGTAATCGACGTTGGTATCAACTATGTCTATGATCCAATCACAGGAAAGACA Gene GeneID:536269|MTHFD2L:XM_002688352:145_cdna UTR3_Alt 3 NULL GeneID:536269 6 GENE MTHFD2L NULL methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like EMBV3_04012 CAGTCCCGCTGTGAACGGGCTCGAGAAACCTGCCTTAGACACGGACATTAAATACACGCA Gene GeneID:537696|PAX1:XM_002692159:187_cdna Constitutive 0 NULL GeneID:537696 13 GENE PAX1 NULL paired box 1 EMBV3_20712 CTCCTGTCGGAGTCAAGTTCTGCCTCAGGAAGGTCAAGTGAAAGAAAGCCATTCTACAGC Gene BVT0102_193314 + 0 NULL GK000003.2:51349675-51413201 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173364 TCONS_00173369 TCONS_00173365 TCONS_00173366 TCONS_00173363 TCONS_00173368 TCONS_00173362 TCONS_00173367 1 XLOC_104346 Coding TCONS_00173369 XLOC_104346 Coding Coding LOC100848965 3:51382442-51400598 = TSS128884 4439 1 TCONS_00173369_5 1348 8 0.755935004131093 0.000842789366398793 0.00100461771508351 0.00074264871375432 0.000687543531250487 0.00048579351349091 0.000151942181183265 3.60323053914508e-46 0.000147908676422208 0.000677231103177204 8.31465116512943e-05 1.9351318690949e-05 6.60507261419253e-05 0.00023756110985775 0.000122255787004047 0.000255015198834904 0.000847650008906113 0.0010734080506808 0.00023740006477219 0.00120642346296955 0.000691936607519095 9.67489203898861e-05 0.000334338786052285 7.73881324196599e-22 7.06177084338897e-05 0.00132335722670904 0.000961708197971825 0.000880273976240076 5.19312644185466e-05 4.27157590752688e-05 1.80490770142653e-10 NM_015237.2 KIAA1107 Homo sapiens KIAA1107 (KIAA1107), mRNA. 0.0 5185 85.83 0.999324172110836 TCONS_00173369_5 sp|Q9UPP5|K1107_HUMAN K1107_HUMAN Uncharacterized protein KIAA1107; 0.0 2062 77.79 0.999258160237389 1 coding 0 0 0 0 -0.271467323109661 0.301077850339756 -0.0393757939708871 0.439777682458055 ATGAGTAGCACATCTGATCTGTTGGACAAAATTTTTAAAGCTGTTGAAGAAAACATTACCACTGAGAATAGTTGCTCGCTTCTTATGGCTCTGGACACATTACTGAACTCTGACAGTACAAAAGAAATGGGTTTTACGTGCAAGATCCAGGCTCTGCGTGATAAGCTGTGGATCTTCCTGGTTCAGTCTTTCTATGCTGTTCGTCACACAGAAAGCTGGAAGCTGATGAGCACAGATGATCAACAGAAAATCCAAGCAGCTGCATTTGACAAAGGTGATGACCGAAGACTTGGCAAAAAGCCTATATTCAGTAGCTCTCAGCAAAGAAAACAGGTTTCTGACTGTGGTGCTATAAAAAACAAATCCGCTGGAGGAAGTAACAAGAAACAGTGTCTGAGTTATCTCTCTGCTCATCAGAAGATGAAATCTGATGGATTAGGAGCCTCTGGACATTCATCAAGTACTAATAGAAATTCTATAAATAAAACTTTGAAGCATGATGATTTAAAGGAAAAGGATCCAAAACCAGCATCCAAGAGTACAAAAGAATTAAAAACTGTGGAAAAAAATGTTTCTGGAAAGCCCAAAGCTATCATAAAGCCCAAAACAGAAAATAGTGATAATGCAAAGTCAACAAACCTGTCACCTAGACAAGCTGTGGAAAGATCAGCAACAGCAGCAGCAAATGAACAGAAAAATTCAGGAAATGGAAAAGGAGTGAGAAATCAGGAAGAGCAAATTACAGGTGCCAGACCCAAGGTACTCACTGGAAATTTAAATGTGCAAGCCAAAGCAAAGCCTTTGAAGAAAGTGACAGGCAAAGATTCTCCACACCTCCGAATGGCAGGGCCCTCCAGCAGATCTACAAATTCAAGTATGGAATTACTGACTTCCACTGACTCTCTAGATGAACCAAAAGAAAATGGGTCAATGAAAGAGAAGCTTCCTGGTCATAAACCTTCCTCTTGTGACTCTCGAGGACAGACTGTGAAAAACAGTGTAGAAGGTATCAAAACTTCCACTGTAGCAATGAAATATCGACCTGTTTCAAAAGATACCAATGGAATTTCCAATAAAAAAAGCACTCATGAACAGGAATCTAATACACATAACAGTGTGCTAAAGAAGATCACCAGCAAAGGATACAGTGATCCAGTACCACAGGCAATTTTAAAAAAAAGGGGAAATGGCAATGGATGTGCTACAGCTCCGCAGAGGACAAAGAATGCCACAGCTAATCTTGCTAAAACTCAAGGATCCCAAGGATCACCAAATTCAGTAAAATCTTCAGTCTCTTCAAGGCAATCTGATGAAAATGTGACAAAATTGGACCACAGTGTAACTACAGATAAACAGACGCCTAAGAGAAAAATTGTCAAGCAAGGACAAACAACTTTGCCTAAGATTGGTGCAAAAAAGGTCACAATGCCTAAAAACCCAAATCAACCCAAAAGAGGTGAAAATTTGAATAATAAAGATGCAAAACCGAAAACACTTCCTGAACAGGTTATACTGAAGACTCTGCCTTCTTCTCAGAGACCTTTAAAAAGTGAACCATCTGTTGTCCAAAAAAGTGTGTCTCTTGATGTGTGTGACAATAATAACAAAGGCAGTGTTTCTGAACAGAAGCCTCATGAACCTCTAACTAATCTCACAGCCAAAACCAGTGATGCAGAAGCATTTCAGTCACCATGCATACTCGACTCACAGAAGACACTGAACAATCAAGAAAAACAGAAGTTGGTGTTAGAATGCCAAAATATTTCAAATCTGGATAAATTAATAAAACGTGAACTGGAATCAAAACAGATCTGTTCAGTTAAAAGTGAAACAAATGTTTCTGGCCACAAAAAAATAGATCACTGCACCACAGCTAAAATACCTTGTCATTCTGATGAGACTGATAATGTCGATCCAAAATTTTATAGTACCACTGCTCTAAAATCCATGATTTCAAATCCTAAAGAAAACTCTTTGAACTCTAATCCAGTTTGTGACTTAGACTCAGCACACGTAGAACAACTCCATTCAGAATTAGATAGGAAGAAGCAAGTAGGGAGAAAAGATACAAACCAAAAATTAAGCATTAAATGTGTGAAAGATGTTTTACCTTGGGTTCCTGAAAAGACAAATGGTACCTTAAATTCTGGTCAAGATGACAGAAAATCTAAAATTCATGTAGAAGAACAGACAGTTCCTAGTCAGTTGTCTGATGACTCTGCCATGAATGAAGACAATCATGCTACAGTAGAGTCACATATTTCCTCCAAGTGTTTTTTGGAACAAATATCAGGGAAAAATTCTAAAGATACGGAAACAACAGAAACTTCAGAGAGCCACGAAACTCCAGAAGCACCATTCATGAGTCACTGGAATTTGAGTACCAATGTTCTGCATCAGAGAGAGAGTCCTGAATCAGACAGTGGCAGTGTCACAACATCCTCTGATGACATAAAGCCCAGATCTGAAGACTATGATGCTGGAGGGTCTCAGGATGATGATGGGTCAAATGACAGAGGGGTTTCTAAATGTGGCACTATGCTGTGCCATGATTTTCTTGGAAGGAGCAGCAGTGATACCAGTACTCCTGAAGAATTAAAAATATATGATAGCAACTTAAGAATTGAAGTGAAAATGAAAAAGCAAGGTAGTAGTGATCTTTTCCAAGTTAATTCAACAAGTGATGATGAGATTCCCAGGAAAAGGCCAGAAATTTGGTCTCGATCTACAATAGTTCATCCTAGGGAAAAAGAAAATATTCCACGAGGCAGTGTCCAGTTTGTACAGGAGGTAGATCAGGTTTCTTCCTCAGCAGATGAAACAGAAGATGAAAGGTCTGAAGCTGAAAATGTTGCAGAAAATTTCTCTACATCTAACCCAGCTCTTCAGCAGTTTCAGGGGATAATTAATCTAGCTTTTGAAGATGCAACTGAAAATGAAAGTCATGAGTTTCGTGTAACTAAAAGTTTTAAAAGGTCTGTTTTACTTTCCGTAGATGAATGTGAAGAGATAGGATCTGATGAAGGGGAGGTCCATGCTCTCTTTCAACCTTCTGTAGATTCTCTCTCACCTTCTGATGTTTTTGATGGCATTTCTCATGAACATCATGGAAGGACCTGCTACTCCAGATACTCACATGGAAGTGAAGGTGGTGTTTTAGAATGCAGACAAAAGAAAAGCAATACTATATATAAAAACAAAAGCTTTCCCTTGGGTCTTAGTAGCGTTGACTCATCAAGAAAAGATAAACAGAGTGCTTCAGCCACAGAAAAAAAGGGTACAACAGATGTCCTGTCCAAAGGAGGCATACAGCTTCCTCCAGGAGATAAAGTATGTAGTGGAAGCAATGTGGATAATGACTTTGAGACACACAGCAAATTTTCAGATAGTGATATAAAATCTCAAGAAAGACCATGTCATTTGGAACTTCGTCAAAGAGAATCCAATTCCGACATACCAAAGAACAGCTTCACAAAGTCTCTGGACTCCTGTCGGAGTCAAGTTCTGCCTCAGGAAGGTCAAGTGAAAGAAAGCCATTCTACAGCTACCGAAAAAGCTAATATTGCTTTATCTGCAGGAGACATAGATGGTTGTGACACAGTGGCACAAATCTACATGTATGACCATCGGCCTTCAAAAACCCTGTCTCCAATATATGAGATGGATGTAACAGAAGCATTTGAGCAGAAAATGGAATCAGAAACACAAGGTACAGACATGGATTTTGAAGATGAGCAACACTTTGCAAAACAAGACTGGACACTATTAAAGCAACTGCTCTCTGAACAGGACTCTAACTTAAATATCACAAATTCTGTTCCTGAAGACTTAAATTTAGCACAGTATCTAATTAATCAGACACTACTTTTAGCACGAGACAGCTCAAAACCTCAGGGTAAAGCACATGTAGACACTTTGAGCAGATGGAGTGAACTAACATCTCCATTTGATGATTCCTCAGCAAGCATTACCATGGCTAGTTTTTCCTCTGAAGAATGTTCACCCCAAGGGGAATGGACAATTCTGGAACTGGAAACTCAGCATTAAGAGTGTTAACACTTCAGAAAATGTTAAAATATGCCGCCTCTTTATTTTTTTGATGTTTCTATTGTATCCAAATGATAACCGCATTAGCCAGATTTAGTCTATCCTTACTATTGAGGAGGTCTTTCCAATTTAGTTGGTTTATTAATATGATATCATATGTAGAAAAAAGTGTTTTTTCCCCTAAAAATCTTGAGCATGTTTTCTATAATTATTGGAGAATTTAGAAGACCTATAAGGAAACCCTTGCTTTAGTTTTCCTTTCCTAACTGGTCAGTTACTTATTTATCATTCAATAATTTAAAATGTGAATGCACAAGTAGAACAGTCCCTTTTTTCTCTGCATATGGTAACAATAATTTAACAATAAAAAAAACTTATCATGCTTGTGTCAA EMBV3_12618 GATCCCCTTCACCAGTGTGACTCCTGCTTTGAAACTTCCATACCACGCCTGGGCATCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18209 CATGCCTTAGGAATTGTCTCCATCACTTGTGGGGCCACTGATTTTTATCTCTCTGACAGG Gene GeneID:618486|KRTAP4-7:NM_001101273:228_cdna Constitutive 0 NULL GeneID:618486 19 GENE KRTAP4-7 NULL keratin associated protein 4-7 EMBV3_26382 CAAGTTCACTGACGACCACCTGCACATCATCGAGCACATCAAGAAGAAGTGCTGCTACTC Gene GeneID:515059|ACTL7B:NM_001075697:10_cdna Constitutive 0 NULL GeneID:515059 8 GENE ACTL7B NULL actin-like 7B EMBV3_37625 AGTCCACCGGGCACTGCGACCACTTTAACAGACCTGACCAATCCCTCTATCACTGTAGTG Gene GeneID:515012|LHX9:NM_001024544:69_cdna Constitutive 0 NULL GeneID:515012 16 GENE LHX9 NULL LIM homeobox 9 EMBV3_03859 CACCTATTGCTGGACTTCTGTTGTAACAAGTTGGCAAACACTGGCTGGAACTGGTCTGCA Gene GeneID:613676|UBE2G1:NM_001082458:171_cdna Constitutive 3 NULL GeneID:613676 19 GENE UBE2G1 NULL ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) EMBV3_06086 ATGACGGCATCCCCCATGCTTTCCGCAGGGAGTCAGGCTCAGTGTACATCTTACTTCATT Gene GeneID:505302|DUSP12:XM_002685847:379_cdna UTR3_Alt 2 NULL GeneID:505302 3 GENE DUSP12 NULL dual specificity phosphatase 12 EMBV3_13572 CTCTTGGATTTTTTTTTTGGTTGCTGTTCTTTTTATAAGTAAATAAGGGAAGTTCTGAAT Gene GeneID:538827|APOLD1:NM_001101180:113_cdna Constitutive 1 NULL GeneID:538827 5 GENE APOLD1 NULL apolipoprotein L domain containing 1 EMBV3_10933 TTATGACCTCTTCCTTTAGGAGGTAGTTACCCAAAAAGACATGTGTCTTTATTAAGGTGG Gene GeneID:533294|RBL2:NM_001098073:345_cdna Constitutive 0 NULL GeneID:533294 18 GENE RBL2 MGC154964 retinoblastoma-like 2 (p130) EMBV3_16215 TCTCCAGAAAATGCTCTGTTGCTGTAGGCATGAGACCAAAAACATACCTGTTGCAGTTTC Gene GeneID:518609|CD55:NM_001030303:64_cdna UTR3_Alt 3 NULL GeneID:518609 16 GENE CD55 DAF CD55 molecule, decay accelerating factor for complement (Cromer blood group) EMBV3_41504 TCGCTCCCGATCCAGGTCTCGGAGCAAAGGTCGTTCTCGATCTCGTTCCCCCAAAGAAAA Variant GeneID:507828|SFRS6:NM_001035272:934_cdna 838^969 3 EMBV3_32856 GeneID:507828 13 GENE SFRS6 MGC128807 splicing factor, arginine/serine-rich 6 EMBV3_20463 CGTCCTGTGAGCTGACCCTCTCTGTGACTGGGAGGACGCCATGGCACCGGGGGTTTCTGA Variant GeneID:616943|VSIG2:XM_002699212:118_cdna 713^857 1 EMBV3_19715 GeneID:616943 29 GENE VSIG2 NULL V-set and immunoglobulin domain containing 2 EMBV3_37825 CCAGGAGCTTCAGCTGGGATGAGGGAGACAGACTGCTTCTAAATATTACAGTGTGAGTGC Gene GeneID:535092|MYO7A:XM_002693507:207_cdna Constitutive 0 NULL GeneID:535092 15 GENE MYO7A NULL myosin VIIA EMBV3_18499 CCTTCATGAAGATGCCCCAGATATGATAAGGATTCAGTAAGACAAAAGCTGTTTTCAGCC Gene BVT0102_053787 + 1 EMBV3_06458 GK000024.2:12960190-13064116 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00207 CTTTGGTTTGAAAGATGTCAACATTCCAACAAGGCCAGTATCAAGCCAAAGTCAACAAAA Variant GeneID:509161|DLGAP5:NM_001076822:56_cdna 255^312 1 EMBV3_01513 GeneID:509161 10 GENE DLGAP5 DLG7 MGC142311 discs, large (Drosophila) homolog-associated protein 5 EMBV3_12106 CCACAGCGCGACTGAACAAAGAGAAGAAATACAGCTCCACCCACCAGAACACCGACACAA Gene BVV0102_247852 + 0 NULL GK000001.2:91626868-91934597 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252468 TCONS_00007677 TCONS_00252235 TCONS_00178427 TCONS_00240534 TCONS_00037672 TCONS_00107735 TCONS_00220662 TCONS_00222766 TCONS_00230724 TCONS_00209558 TCONS_00089010 TCONS_00137812 TCONS_00040740 TCONS_00251804 TCONS_00157613 TCONS_00153137 TCONS_00109898 TCONS_00178306 TCONS_00010107 TCONS_00064912 TCONS_00241274 TCONS_00223554 TCONS_00229819 TCONS_00211316 TCONS_00175849 TCONS_00107832 TCONS_00233560 TCONS_00074566 TCONS_00111731 TCONS_00166449 TCONS_00161123 TCONS_00222455 33 XLOC_155409 XLOC_003238 XLOC_155176 XLOC_108200 XLOC_147198 XLOC_021501 XLOC_063645 XLOC_133979 XLOC_136073 XLOC_140214 XLOC_128069 XLOC_053796 XLOC_084022 XLOC_024554 XLOC_154745 XLOC_096068 XLOC_092902 XLOC_065802 XLOC_108079 XLOC_005659 XLOC_039636 XLOC_147938 XLOC_136854 XLOC_139313 XLOC_129826 XLOC_105628 XLOC_063742 XLOC_143042 XLOC_046320 XLOC_067631 XLOC_101287 XLOC_098015 XLOC_135764 NonCoding TCONS_00233560 XLOC_143042 NonCoding NonCoding - 8:92837961-92838349 - TSS175064 388 1 TCONS_00233560_1 87 1.00257731958763 1 0 0 6.47449892410887e-06 1.45753048573501e-05 2.14024172268101e-05 1.06039044869753e-06 1.02436013452191e-06 0 6.24283151548598e-06 1.17319659146115e-05 8.83699995848118e-06 5.89995753792029e-06 9.61796768479136e-06 5.54631235203282e-06 4.45978395891205e-06 1.502533153669e-05 0.000192867842721031 0.0856848692931864 0.000875165884924454 9.24088388757177e-06 1.15841318822913e-06 1.30400914292684e-06 9.09073043177422e-05 6.33333360973377e-06 0.000103798968979324 0 4.8422483223872e-05 5.37684084509171e-06 1.48533757374075e-05 3.22925558412209e-05 5.89741173966195e-05 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-25 120 81.45 0.31701030927835 0 noncoding AAGCTTGTGTCGGTGTTCTGATGGGTGGAGCTGTATTTCTTCTCTTTGTTCAGTCGCGCTGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCGCAGTGCCTCAGCCACACTGGGTCTGCCCCCGCTCACGGCGCATGTAGCCTCCCTGCCCACACTGCTCGGGCTCTAGGTTGTTCTGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGTACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGAGTTTTGTGCTCTTCCCAGGTCTGAGCAGCTCAAGTGATGAGGTGTTTGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCAC TCONS_00228645 . 5' 8495 TCONS_00228645 . 5' 8495 EMBV3_29890 CTGTTGTGGGTCGAAATACATTTATAGGGTGGTCTGTCACGAGGTGTGGCATGTACCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21559 AGTCACTTCAGTCGTGTCTGACTCTTTGTGACTCTGTAGACTGTAGCCCGCCTGTTCAGA Gene GeneID:534581|IL20RB:NM_001102175:54_cdna UTR3_Alt 3 NULL GeneID:534581 1 GENE IL20RB MGC140349 interleukin 20 receptor beta EMBV3_18079 CTGCAGTCGGAAGGCGCTGCATGTCAACTTCAAGGACATGGGCTGGGATGACTGGATTAT Gene GeneID:539559|GDF5:XM_002692449:472_cdna Constitutive 0 NULL GeneID:539559 13 GENE GDF5 NULL growth differentiation factor 5 EMBV3_14711 CCCACCAGCAATGTATAAAGGCTCTAGTTCTCCACATCCTCACCAACTTTTGATGTTGTC Gene GeneID:526205|GSTCD:NM_001099035:50_cdna Constitutive 0 NULL GeneID:526205 6 GENE GSTCD MGC157107 glutathione S-transferase, C-terminal domain containing EMBV3_20177 GGCCATAAACTACTCACTCTGCCTTCTCCTTACAATTACCTGAACCCTTTAGACTCAGCC Gene GeneID:768067|MGC134427:NM_001077124:67_cdna Constitutive 0 NULL GeneID:768067 1 GENE MGC134427 NULL hypothetical protein MGC134427 EMBV3_14125 CAGCTCACCACCTTCAGCTTCTGTGGCAACCCTATCTCTATGGCTGTGCTGGAGAGCCTG Gene GeneID:528601|PRAME:NM_001077979:29_cdna Constitutive 0 NULL GeneID:528601 17 GENE PRAME NULL preferentially expressed antigen in melanoma EMBV3_27792 ATCTACCCATCCTACCCCAGCTCCATTCCCCATAAAAGCAGGTCTCAGCTTGCCACTTCT Gene BVV0102_221081 + 0 NULL GK000019.2:25496727-25530010 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29741 AGACTCCAGAACTGAGGACCACTACATGCCAGTTCACTGTGGGCAAACAATCCCCCAGTT Gene GeneID:783426|RNASE11:XM_002690659:216_cdna Constitutive 0 NULL GeneID:783426 10 GENE RNASE11 NULL ribonuclease, RNase A family, 11 (non-active) EMBV3_37781 CAGTTTCTGACAGAATGGCTGGTAAAAGGGAAGAACTCTCCAAGTCCGTTCTCTCCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06647 CCCAAGACATCTCAGAAGGAAGCTGAGGAGGTGAACTGCCCTCACCTCAGCCGTGGATTC Variant GeneID:533569|MGC142908:NM_001083721:18_cdna 516^587 3 EMBV3_01483 GeneID:533569 X GENE MGC142908 NULL hypothetical LOC533569 EMBV3_41817 GCATCAGGTGGTCACAGTATTGGAGCTTCACCGTCAGCATCTGTCCTTCCAATGAACGTT Gene BVT0102_081119 - 1 EMBV3_42502 GK000007.2:74185134-74334262 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01755 GTGAGTCAAAGAAGGACCCTGCCAACACAGTCGAGGTGAAAAAAGGATCCAGGAAGCCCA Gene GeneID:527400|H1FOO:NM_001035372:128_cdna Constitutive 3 NULL GeneID:527400 22 GENE H1FOO NULL H1 histone family, member O, oocyte-specific EMBV3_30494 CCGCAGCCCCTTGAAGCTCTGACCGTAAAACAAATTCAAGACGATGTAGAGATCGACTCT Gene GeneID:528191|BBS5:NM_001101132:19_cdna Constitutive 0 NULL GeneID:528191 2 GENE BBS5 NULL Bardet-Biedl syndrome 5 EMBV3_00139 TTGTCAAAACAGTGGTTGGGGAACTTGATCAGCTTGGCAGTGTCCTCTCACTAAGGGTCC Gene GeneID:539216|KRT26:NM_001099096:189_cdna Constitutive 0 NULL GeneID:539216 19 GENE KRT26 NULL keratin 26 EMBV3_41713 AGTTCTGCTCTGCTCTGCCCAGCTTCAGATTCCTCATCTCTGGCAGGGATCCAGTTATTA Gene GeneID:533725|CGN:XM_002686041:239_cdna Constitutive 2 NULL GeneID:533725 3 GENE CGN NULL cingulin EMBV3_03605 GAGCCCTATGCCAGCTACACAGAGAAGAACAATCCACTTTATGATATTACAAACAGGGTG Gene GeneID:516008|CD200R1L:NM_001099374:80_cdna UTR3_Alt 2 NULL GeneID:516008 1 GENE CD200R1L CD200R1 CD200R2 CD200 receptor 1-like EMBV3_32153 ATGAGATAGAAGGTTGGGAACCTCCAAAACTTGCCCTTGAAGACGTGGCGGCAGACTCAG Gene GeneID:614166|LOC614166:XM_002685163:158_cdna Constitutive 0 NULL GeneID:614166 1 GENE LOC614166 NULL similar to Uncharacterized protein C8orf42 homolog EMBV3_30982 ACGGAGGCACATTGCGACTGAACCGCCAACTGCCTGGATGTGCCTTTTCTCCTGAAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38613 TTCTCCGTGTAGGTGGAACGATTGGGAAGACAGGGGAGTTTGAGTTTGTCAGTGGAACAC Gene GeneID:531271|LOC531271:XM_002698533:195_cdna Constitutive 0 NULL GeneID:531271 26 GENE LOC531271 NULL similar to Pancreatic lipase-related protein 3 precursor (PL-RP3) EMBV3_30583 GCAGACGTCGCCACCATCAATGTGACTTGGGATCAGGGTCAGACTCAGGATCTTGCTCCA Gene GeneID:509780|PRICKLE3:NM_001014886:54_cdna Constitutive 0 NULL GeneID:509780 X GENE PRICKLE3 LMO6 prickle homolog 3 (Drosophila) EMBV3_40640 TCACACATGCCAGAGATTGCCCAGGAAGCGATGGAGGCTCTGCTGGTTCTTCATCAGTTA Gene GeneID:280877|NF1:NM_001122728:167_cdna Constitutive 0 NULL GeneID:280877 19 GENE NF1 NULL neurofibromin 1 EMBV3_16946 ACTTTCCCTTGTCCTGGGGTGGTGGTTCCAGAGGCTTGGGGGCCAATCTGGTTCCATTTT Gene GeneID:788119|NFATC4:NM_001102536:293_cdna Constitutive 0 NULL GeneID:788119 10 GENE NFATC4 MGC143267 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 EMBV3_18925 CGTGTTCACACTGGCGAAATGCGTTATGACTGCACCGAATGTGGAAAAGCCTACAGCAGA Gene GeneID:527186|ZNF772:XM_002695488:235_cdna Constitutive 0 NULL GeneID:527186 18 GENE ZNF772 NULL zinc finger protein 772 EMBV3_31722 GAGTACTTTGGTGAACGATGTGGGGAAAAGTCCATGAAGACTCAGAGCATGGTCGACAGC Gene GeneID:538751|AREG:NM_001099092:92_cdna Constitutive 0 NULL GeneID:538751 6 GENE AREG AREGB MGC152310 amphiregulin EMBV3_04389 TTGTGTGGTCAGCTCTTCCCTTCATCACATCCTTGGAGAACAAAGGACACCGCTACCCGT Gene GeneID:507410|POP5:NM_001075312:87_cdna Constitutive 0 NULL GeneID:507410 17 GENE POP5 MGC140734 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) EMBV3_27656 CCAGCTATCCATGACCTCACCTGGTTCCAGTACCACTCTCTGGATGTCATTGGGTTCCTA Gene GeneID:100138908|LOC100138908:XM_002688327:195_cdna Constitutive 0 NULL GeneID:100138908 6 GENE LOC100138908 NULL similar to UDP glucuronosyltransferase 2 family, polypeptide B4 EMBV3_00602 GTCACATCGCCACTGGAGGTTTATCACAAGGGGTGCACCTGGAGGGCCCATTCATCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42729 CCCAGAAGATTGTATGGTTCTTGGGGGGCCAGGAATGCCTCTGCCTCTTTCATTATGGTC Gene GeneID:615773|FAM119A:NM_001083518:47_cdna UTR3_Alt 2 NULL GeneID:615773 2 GENE FAM119A MGC142783 family with sequence similarity 119, member A EMBV3_29457 TGTGCCAGTATGTCAGCTTTGCACCTGAAAGATAATGTGTATTTGGAAAGCTTATGCTTC Gene BVV0102_204003 + 0 NULL GK000010.2:65202412-65243377 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014386 TCONS_00014383 TCONS_00014384 1 XLOC_008288 Coding TCONS_00014383 XLOC_008288 Coding Coding SLC30A4 10:65175743-65206180 j TSS10398 5869 1 TCONS_00014383_2 393 9 0.807464844263372 0.000934229416368783 0.00199242119591958 0.00137626328995349 0.00155904717353868 0.00132213298515649 5.00122672598234e-05 0.000717631539454087 0.00123243175391029 1.81754645511181e-15 0.00021255650800149 8.05793767216016e-05 0.000143161904520629 0.00037611123107264 7.6030930278623e-05 0.000183042261704583 0.0011286314399222 0.000464053524464617 0.000157278061725232 0.00108575312883619 0.00116735248679962 0.000434595369773749 0.000118430276593246 1.10597696293232e-07 6.98082847250563e-05 0.000527754103051143 0.00215341983532935 0.00024936075700459 0.000142956906562617 6.58382274486973e-05 2.67707030573178e-05 XM_002690940.3 zinc transporter PREDICTED: Bos taurus solute carrier family 30 (zinc transporter), 0.0 8239 100.00 0.778156415062191 NM_013309.4 zinc transporter Homo sapiens solute carrier family 30 (zinc transporter), member 4 0.0 2554 83.85 0.393593457147725 TCONS_00014383_2 sp|O14863|ZNT4_HUMAN ZNT4_HUMAN Zinc transporter 4; 0.0 691 85.05 0.994910941475827 1 coding 0 0 0 0 -0.0722177519809262 0.51248967951139 -0.0320211309613794 0.521269148553474 CGGGCGCGCCAGGCCTGCGTGTCCTCGCGCCCACCCCTCCCTGGCGCGGCTCGTCCGCGGCCGCTCCAGCGCACGCGCGCGGCTTCGCGCAGGGCGGGGAGAGGCGGCGGCCGTGGGCGCCCGGCCCCGAACCTGTCAGACTCGGGAAGCCGGCCTGGAGCGGCGGGCGCTGCAGGCTCGAGGACCGCCCCGCTCCTTCGCGGCCCCGGGCCGAGATGCGCGAGCCGGCCCCGCGGAGCCGGCCGGGGGCGGGGAGATGAGCGGCGGCCCGACAGCGGCACCCCAGAATGAGAAGGGACGCGCCGCAGTGCCACTGGGAACTGGCTTTCGAGTGAAGTAGGAGTCTCCGGCCGTCCGCCTGCACCCAGCCGCTCGGCGCCGCGGCCGCTCAGCCAGTGCTATGGCCGGATCCGGCGCGTGGAAGCGCCTCAAATCAATGCTGAGGAAGGATGATGCGCCGCTGTTCTTAAATGACACCAGCGCCTTTGACTTCTCGGACGAGGCCGACGATGACTCCTTGCTGGACCAGGACTTACCTTTGACCAACAGTCAGCTGAGTTTGAAGGCGGACCCCTGTGACAACTGCAGCAAGCAGAGAGAGTTGTTGAAGCAGAGAAAGGTGAAAACCAGATTGACCATTGCTGCCGTTCTTTACTTGCTTTTCATGATTGGAGAGCTTGTAGGTGGATACATTGCAAATAGCCTAGCAATCATGACAGATGCACTTCATATGTTAACTGACCTAAGTGCCATCATATTGACCCTGCTTGCTTTGTGGCTGTCTTCAAAATCACCAACCAAAAGGTTCACTTTTGGATTTCATCGCTTGGAGGTTCTATCAGCTATGATTAGTGTGCTGTTGGTGTATATACTAATGGGGTTCCTCCTCTATGAAGCTGTCCAAAGAACTATCCACATGAAATATGAAATAAATGGAGATATAATGCTCATTACTGCAGCTATTGGAGTTGCAGTTAACGTGATAATGGGGTTTCTGTTGAACCAATCTGGTCACCATCATGCCCATTCCCACTCCCTGCCCTCAAATTCTCCTACCACAGGTCCCAGATGTGGACACAACCAAGGGCAGGATAGCCTGGCAGTGAGAGCTGCATTTGTCCATGCCTTGGGGGATCTGGTACAGAGTGTTGGTGTGCTAATAGCTGCATACATCATACGATTCAAGCCAGAATACAGGATTGCTGATCCCATCTGTACATATGTGTTTTCATTACTTGTGGCTTTTACAACCTTTCGAATCATATGGGACACAGTAGTGATAATTCTAGAAGGTGTACCAAGCCATTTGAATGTAGACTATATCAAAGAAGCTTTGATGAAAATAGAAGATGTACATTCAGTGGAAGATTTAAATATCTGGTCTCTCACTTCAGGAAAACCTACTGCCATAGTACACATACAGCTAATTCCTGGAAGTTCATCTAAATGGGAGGAAGTACAGTCCAAAGCAAAGCATTTATTATTGAACACGTTTGGCATGTATAAATGTACTATTCAGCTTCAGAGTTACAGGCAAGAAGTGAACAGAACTTGTGCAAACTGTCAGAGTTCCAGTTCCTAACTGTGTATATATGAGAGACTGCTGCCTTATTTATCCTGCAGTCACAGATGTGAGAGCAATAAATGCACACCTGAGTGAGAAATGGAATCCCTGACAGCTGTGTCACTATCAAGCACCGGTCTCTCAAAACAGACACTCCAGCCTGCCAGTGCTAGTTTCTGTTTAATGGTAAAATGAGACTTCACCATGATTCTCATATGAAGATGTTTCTAAAACACTGTTTACAGAATGAGACATGACTCTACAGATACCTCACAGAAGACAATCCAAGACCGTACTTCACTAATTATGACAGTACATGTCTTAAAGAAAGCATCAAGAATTCAGTATTTGCATTTAAAAATCCTTTTTAAAGACCATTTTTATATCAAGCCAGTGCTGGAAAACTGATTTTTTTTTATTATGTAATCTTGAACCCAGCTTCTTGAATTTGACACCCACCTCTCTTTTTACCAAAATTATTTCTCAAAGTACTACTAATTATCCAGAGAGTGGAATAAGCATGTATTCCTAGAGTTTCAGAAATGTTTTATTTCACAAATAAGTTTGAATCTTATTGTTATAATTTGTAATCAACTTTTTCCAGATAGTACAGGGTTTTGTATCTCAAAGTTAGCATTTTTGGTTATTTGTAATCTTATCAGAATCAAATATTTACCTATTGTGGCCACTGATACTAAATTGTTTAGGAGATATTTTCTGTGTTATTCTGAATAGCAGAAGTGAATCATAAACTCAAATTATAATATGATACTTTGAAAAAAAAAAACGGAGTGAGAATGGGGTGTGGGGTTTCAGATTTAAGTCTTCCTGAAATCACTTGTTCATGGAATTATTTTAAGAACAGCAAGAGACCACAGAAGGTAAACAATGACCCTCTGTCCTTTTAAAAACTGCCTTGCCTTTTGTACAGGAAGTTGCTTGGTACCTTCCTTCCTGCTTCCATGCCAGTTAACCTGTGGGAGCCCTTTCAGGGTAGAACTCTGGGCAACTAAGTTTCAGTGTGCCCTCCACCTCTCCTGTAGACCAACCACCTTCCTCCAGGAATAATTTCAGATCAATGACACGGGTTAGGGATTCTCCACGGACTCCAGAAATCCTAGGGTATAACTTTGAAGTTTTTCCAATAATAATATCATAACAGAAATGCCCAGAGGGATTGGGGGAAGATATTACTCTGAGAAGACAAAATTTTCAAGGGTTTTTGACCTTGTGTGTTCTTATGTTTTGAAGCAGGGGAATGGGGATGGACATTAAATCTGTTGTGGGGAGGCTAAGCATAAAAGTTTTCAGAGCAGAGGCAACTAATTGGTAACAATTGTGTTAAAGAGGCAGCTGTGAATATTCATGTTTCATTTTGCAACTGTTGGTTTTGAGATTATCTTTATGCATGTTAGAAATCCATTTTCAAGAAGAACAGTTTCTTATACCAAGAACAGATACGGTCCTTTGACTCCTCAGAATCAGAGTAGAGCAGCAGTGTACCAAGCAAGTTGTGAACTGAAATCCTAGATGGGCATGCAGATGACTCCTGATACAAATGAACAGGACACATGCTTTATCTTTCTGCCAAATACCTCACTATGTAATAAACCTAAGATAAAACCTGGATTTACCCCAAAAAAGGGTTGATGAGGATTAATGGTTTGTAATAAAACCTCGTGTTTGTTAAATATTAACTTTATGAGATTCTTACTGTGAATCTATTTAAAATAATGATTTGACTTTTTCAAAAATTTCAGTAGCACATAAGCTGTTGAAATCAAAATAAATATAAAATTAAAATACAGAGGGCAAGTAAGAATAAATGGGAGGCATTTCAGTGGACATTTGGGCACTTGTAGACTTTGAGCACTTAGCAAGAGAAGGAAAAAGAATATGCATTAATTATGCTAATGGTTTCCCCGTATTTGCAAATTGTTCCTCATAGCTACCCAGCTTGTTTCTTATAAATTTTCCTTTATCTTAAATAGCTATGTCTGACTTTTCATAAATAACCCATTCCTTGGAAAGTTACTTGATGAAACAGTCTGAAATACATTGAGGATTGAAAGGATCCTTTTGTAAAACACAGAAAGACCAAAAACTTTTGTAAATCTTATAGTGTTCTCCTTAAAATGAGAAACACATGAAGTTTTCCTATGCTTTCCTTTTTGTAGCAAGGACTATAGACTTTGTACTGGTACTTCACTGGGAGTGTAAGATTTGAGGATTGATAGATTTAACTTCTAACTTATAAGACCTGCAGAGAAGGATGTGAACTTAGCAGATATGACCAGGAATTGCACAGCTGGTCTGTCCTTCCCCCGCCTAGTTACAGCCCCTAGTTAGACTCCTCAGCCGGCTCTCAAAAAGGGCTCTCCATTGTCCAGCAAAGGCAGTGGCTGTTTGTATAAACACCTAGCATTATTAATTTTGCATAAGGAAAACAGATCACAACGTAAAAACTGGGCAATTCTTCAGTGAGGTGTATTTTGGTTATCATTTGCAAATAATCAGAATTACTTATGTGTATAACCTGTGTTTCACAGCTCTGACCGGATGCAGCATTTTGACTTTTATGGCCTATTGTTTCATTAACGACCATGCTGCTTTAGAAATATAAAACGGGGAATATAGTTGCATAAAGCATATTTCAGAGGGCTTTGAAATGCAGAACCAGAAGCGACGGAATTCCTCCATACATTTTCCATTAGCTATTCCCTGTGTAATGTGAGCCAGGATTTTCACAACTTGCAGCTCCCATCAGTATTGTTTGCCAAATCACTAGATTTCTTATTTTACTGTTTTCCACTTCAGGTGCTTCATTCCCATTTTCTAAAACTAGTTTCCTGCTCTTAGGAGTCTCAGTGTTCTGGTTCTACCTCTTGAGCTCAGGTGTCCTCACTGAGTGTTTGTCTTCAGTAGAATTTTCCCAGAATAGACACAGGCAGGATCAGATATGTGAGCTTCCCTTTCATTTTAATATGAGGAAAAACCATCCTTCAGAGACAAAGCAGCACTTATAAGTGTGTTTCTGGGTAAGGTAGAACCTTTGTTTAAGCTGCTGATTGTTCCTGATCCAAATTTCTCTGCACGCCGAGCTTTATGGTAAGTGTGGTAGAACTAGATGCACTGCACAATCACAAGCCAGGATCACTGCTAAGATTCAAATAACCGCTCTTACCACAGAGAAGTGTTCACTTCTGAAACAAGCACAATTAGCTAAATGTGTTTTCTTCAGTTGGTTCAACGAAATAAGGTGTTCTTACATAGAATTTGAGCCCCTTTGGAATAAGGTTTTAGACACTTTTGCTGTTGCCTCTGCCTTACATATAGTAAATTTAAAGTTACAGAATGTGTTCACAAGACTAGTTCATCGGGTTCAGTTTGTCTTTGAATCAAGCTTCACTTAGGAGCCAGTTGGGTATTGTTAGTCACAAATGCAGAGTGACACTTTGCAGGATGCTCTGTTGAGGGGAGGCCAGCTTGATCCCCAAACTGTTGATTATGCCTAATGTCTCTCTAACCACGATATCATTTGCAAACCCTAGCTACAGATCTGTCCTGTGAATCCCACCAGACAGGGCTTCACATTTATGTTACAGATCGCTAGCCAGGGATATTGCTTGTGATGCCAGTAAGAGCACACAGATTGTGGAGAAGAACCATCGTGGGAAGTCCTCAGTGTTAAATTGTGTGTGTGCCCCTCCGTTACACATTCCAGCCAGCCAGTCATTGAATTCTCACTTTCAAAAGATTTAACCCATTCTTCTAGTCATATTGTGATGACCAACAAACATTTTCTAATTTTTGGTAAGATTGGAAAACACTTAAGAAGACTTTCCCAGTTAAACCTATGACAGTGTCAATTTAAATGTTGCAATTAAGTATATTCTGAAATAACTGCAACAAAATTGAAATGTGCCAGTATGTCAGCTTTGCACCTGAAAGATAATGTGTATTTGGAAAGCTTATGCTTCTCTAAATAAATACATGTTAATAAGTAAGCCATATCACACTTTAAGAAATTGTATATACTTTCCCATATACGCTTTCAGAAACCAGGTATTTTGCATAATGATTGATTTTAGAAAGATTTTGAAGCTGGAGTCTGTCCTTGTAATTTAAAATCAAACTATAGTATATGTATATGTACTGAATTTGCAATCTTCAAATTGTAATTTCCTATACATTTATTAAAGTATTGTTTTGCCATGTGGTTTATTAAAAAAATGAAAGTGTACAGTGCCTTAAATTTCTATGTATTTAAAATTGAATAAATAATCATAATAGGCCTCAAAATGT EMBV3_29385 TGATGTGGTGAAAGGGAAGAACCTATAAGCAAGGATACTCTTCCCAGCATGCTCTTATGC Gene BVV0101_041414 + 1 EMBV3_30784 GK000019.2:1924250-2362213 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06350 TGTCCCTCAGGAGTATTTAGTAACAGATGACCTTCAGACCCTCTACCATTTTTCCACTGG Gene BVT0101_007653 - 0 NULL GK000028.2:29836854-29850370 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160581 TCONS_00160579 TCONS_00160580 TCONS_00160577 TCONS_00160578 TCONS_00160582 1 XLOC_097686 Coding TCONS_00160580 XLOC_097686 Coding Coding LOC100847783 28:29841367-29850272 j TSS120040 2801 1 TCONS_00160580_5 161 0.0489111031774366 4 0.685871518418688 0.00023038794918366 5.0591781555839e-08 4.29625736277419e-06 9.64318133575851e-09 2.36938136057449e-05 3.01142539908891e-21 1.61123638366246e-09 3.24299799155162e-09 1.37267079319206e-07 0.000224955472926775 4.41524399737134e-08 7.6627355812622e-05 2.45329152912479e-05 0.000662054322966284 0.000986191613342989 0.0015114131906631 2.30538250166146e-09 0.000269057954809423 8.91490333735355e-25 2.29618724517411e-20 1.67959593609678e-10 7.98075339949148e-16 0.000179427896979009 2.8669054113889e-08 4.22713523303603e-07 2.07808912907628e-08 1.29444814954613e-08 1.86013026821625e-07 4.40167436479269e-08 2.67682389233858e-08 XR_226243.1 LOC101903915 PREDICTED: Bos taurus uncharacterized LOC101903915 (LOC101903915), 5e-10 71.6 83.58 0.023563013209568 TCONS_00160580_5 sp|P61570|ENK17_HUMAN ENK17_HUMAN HERV-K_11q22.1 provirus ancestral Env polyprotein; 5e-19 85.5 32.68 0.919254658385093 0 noncoding 0 0 0 0 -0.128017902277857 0.386157602044381 -0.0299630128604114 0.539586344321055 ATGCTCTTCTTTCTTTTCTTGGCGGGGTCGCCTTGATTCCGGTTTCGGACCCTGGCTGGTGTAGACACTTGTGCAGAGCCACTTCGAAGCCGTGAAGAAAAATAGATTCATTTATTTGAACAGCTGCTGCGGCTTAAAGAATCGTTTTTGTAGGAGACAGGCCTACTAAAAGGCCTGACAAAAGAATTAAACAATCTTGCTGAGAGGACATGACTCAGTATGTGATTCCTGAAGGAATCCAAGAAGGAACAGAAAACATCTTGAAAGCAGGATGGACACCTGGGGTTGGAAAGCCATCAACAGACTGTTCCTATCCTTGGTGCCTGGGAGGCACATAAAGATTACCTGGGTCTCTGTCCTTGAGGCAGAAAAACAGGGATACAAAAATATTAAATGTTAACTGCACAGGATTATCATTGAAGGCCACCTGACCTGCTATGCTCATGTAAACACGTACAAGGAAGTCTCAAAAAGTATAATAAAGCAGACTTGAAATCAGTTTGGGCGCCTTCACCTCGTGGGGGTGTTGGTTCCCTTTCTTGAGTGTTTCTCATTCTTTTGCCACGGTGGCGCTTTGGGGAACCCGTGCTGTCGAGCTGGACTAGACAAGTGGCGCCCCAACAGGGACCTGAAAGGGAAACCAGCTTTCGGAGCTTCTCCTTAGGAGGCAAGGAACGCAGGGAATTCCGACCGAAGAGGTGGACGTGGAAAGTACCTGATGCAAATAAAGAATGTAAGGATGGATATTATGGTCCAACCACCAAAATTTGGCAATCATCATATTCATCAATACAACAAGCTGAAGTAGATGCCATAATTACTGTCCTGTCAGACATTGTAATACCCATTAATATCATCTCAGATTCTCAATATGCTGTTAAGTTTCTCCCTTACAGGAGGTTTGGCAAAAAATATTGTGGAAAGAGGACAGGGAATGGAAGCTGGATATCATGCTTAAACAAGGAAGAGGGTATGCTCTTACCTTAATAGAGGAAAATGAACACCGATGGATCCTGAGGAGGAGAATCTGGTATTGGAAAGAAAAAAACATGATTTGATATAGACCCACCCTCCAGACTTCTGACGCATGCCATGCCGCACCTTACGTTAGAACTTGGGCCTGCCAAGACCAAGCGAACGTGAACTGCCACAATACCCACTTGGGGGCAGAAAAGTTATCACAGGAAGCTGAGAGCCTAGTTCATCATCATGGCCTTTCAAAAACATCTGCCAATCTACTACTGGCTATGGTAACCCTTATCACAATGTCAGTAAGTGTTCAGGCTGATTCCAGTCATCATTATTGGGCATATATTCTCAATCCTCCTTTATTAAGACCCATTACATAGGAAGATTCAGTATTCCCATATTTGTCAATGATTCAGCCTGGCTTCCTGGTCCTTATGATCCAAGCCTTCCTTTAAAAGAGGAAGAAGAAGGACAATCTCTAAAAAATTATACAGTAAGAACAGACAGCACATCCATTTGTATAGGATTTGGAGAATTCTGTTTAAAGACGGGATTCTGGGGATGGCTTTCTATTGTAGAAAAGCCTGGAGAGAATAAGAACACTTTTTTCTTATTAACAGCACTTACTTTTAAAGAAAGAGAAAATTCCACCATACATTATCGTCCTCCTAATCTCCCAGGCTATGCTTTTAAGAATAGGACATGGTATGGATGGAGGACTGGATCCAGTGGAAAAATGGTAGAGGGTCTGAAGGTCATCTGTTACTAAATACTCCTGAGGGACAGATTATAGATTAGGGCCCTAGAGGAACCCCTAAGATTAAAGGAACAAGTATTTCTAGTCCATGGATATATCATAATAACACACTTGGTACATATGGAAATGCATCTTTGATATGGCATGGAGAGGGATTTGCTCCCCCCATTCCTCAACTTATCCATCACCCAGTACATAATGAGATTTGGAAGATACCTATGGCTTTAAAAACCCTTAAGGCTTGGAATGGCCATTATACTGAATATATCTTAAACGATCCTAAGGCAACTTTTAATTTTACTAAAAATTCTACTCATACTATTCAGGCCTGTGTAAGATTACCTTTTGTGCTTATGTTAGGGCCAGCGATATGTAACATCTCTACTGGTCTCATAAATTGTATAAATCATTCTTTTTATACTTGTTTAAACAATACCATTCCTTTCAATGAATCTTGGCAAAGTATTTATGTTTTAAAAACTTGGACAGGTATTTGGATACCAGTGGATTTACAAAGAGGCTGGCAAGAAAGCCCTACTCTTTATGCCATAGAAGAAATTATAAAAGCAACTTTAAAAAGAACAAAAAGATTTATTGGTATGTTAAATAGCAGCTATTCTGGGAATTATAGCAATAACCACCACTACAGCAGTGTAGCATTGCATCAATCTGTTCAAACTTCATTTTGTACAAGATTGGCATAAGGATGCAGACGTTCTTTGGTCCACTCAACAAAAAATAGATGAAAAATTGGCTTCACAAGTGGCTGGCTTACAACATACTGTTATTTATTAGGAGATCAATTGGTAAGTCTACAAAAACAATTAAGACTAGAGAGTGACTTGAATTACACATCATTCTGTGTGACTGCACATAAATATGTATAATCAATTGACTTTTAACTGGGATAAAGTTAAACGACATTTACTAAATCAAGGAAATATTACATAAGATATACAAGAGTTACAATGTGACATTCTAGACATGTTTAATAAAAAACTTGATGTGATTACTGGCTCTTTGCTTAATGCTATAGCTGATGGACTGTCTTCCTTAAATCCTCTCAAACAAATCA EMBV3_38271 TAGGTTTAACGCGTCTCAGGTCGGGGTCCCTCTGATTCCGCGCGCCAATTTCCGGAAGGA Gene GeneID:508878|UNC93B1:XM_002699368:287_cdna Constitutive 0 NULL GeneID:508878 29 GENE UNC93B1 NULL unc-93 homolog B1 (C. elegans) EMBV3_06367 AGGTTGAAGTTCCGACTAATTGGACGCTTCTCTACTAGTGTGGAGCGGGTGTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_38698 ACGACTTCATCGAGCACTTCCTCTCCAAGATGCCGGTGGCCGAGGAGAACAAGCAGATCA Gene GeneID:524530|CCND1:NM_001046273:1_cdna Constitutive 0 NULL GeneID:524530 29 GENE CCND1 MGC137744 cyclin D1 EMBV3_32408 AAGAGCTGTTTTCCATCGGACTCCGAACTGTGACCCAGGAGGCTCTGGACCTTGACCAGT Gene GeneID:515395|STK11IP:XM_002685595:228_cdna Constitutive 0 NULL GeneID:515395 2 GENE STK11IP NULL serine/threonine kinase 11 interacting protein EMBV3_35394 TTCCTGCTGCAATATGAGGAGGCTTGGAGAGAGGAAGTAGAGACCACCGGAGCCAGAAGT Gene GeneID:788454|MGC133764:NM_001080372:17_cdna Constitutive 0 NULL GeneID:788454 X GENE MGC133764 NULL melanoma antigen family B-like EMBV3_43631 AAGGTGCTGCCACTATTCTGTCTGGGGTGGGAAGGAGGGGTCACTGGGTAAGCTGTCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25793 TGACAGCTCTTACCTGCTTCGCCACTAGCGCACCCACTCTGGTCAGAAGCCCTACAAGTG Gene GeneID:507011|ZNF768:XM_002698679:183_cdna Constitutive 0 NULL GeneID:507011 27 GENE ZNF768 NULL zinc finger protein 768 EMBV3_06029 AGGCCATGACAATCCTTTTCCTAACCTGCAAGAGACAGGCAACTCGTGGTTCTCAGTGCC Gene GeneID:781463|LOC781463:XM_002707881:2_cdna Constitutive 0 NULL GeneID:781463 Un GENE LOC781463 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_00670 ACAGAATATGGACTGTGAGCCCAGGCAAGTCAAAATGAGCAGCCAGAGGAAATCTGGGAG Gene BVV0102_221972 + 1 EMBV3_40423 GK000014.2:79733783-79754127 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053988 TCONS_00053987 TCONS_00053990 TCONS_00053989 1 XLOC_031878 Coding TCONS_00053987 XLOC_031878 NonCoding Coding - 14:79751521-79753357 - TSS39715 686 2 TCONS_00053987_2 89 0.578717201166181 2 0.62724795640327 6.32534387340927e-06 4.30997138208015e-11 5.93767834968928e-06 3.13978680958944e-09 0 5.21429397957077e-06 0 3.70155814499034e-05 5.33131815246286e-09 3.72712901466034e-17 0 0 7.2033622533361e-05 0.000104069651999752 0.000251544995761479 0 0 0 4.12047034386855e-05 0 0 0.00042811503576841 0 0 4.10551868332724e-05 0 0.000149702996918801 5.01660604292793e-05 3.35313703293516e-17 6.10201699382284e-08 XR_227355.1 LOC101903470 PREDICTED: Bos taurus uncharacterized LOC101903470 (LOC101903470), 5e-53 212 79.30 0.362973760932945 0 noncoding 0 0 0 0 -0.371223068218788 0.306988870310118 0.0198377175488171 0.750044735476884 GGGCGGCGCAGAGCGCCTAGGGGCTGAGCGGATCCAGGGCTAGCGCTGGGACTTCTAGGGGAGGACTGTAATGAGACGGAGCTGAAGTGCTTTCCTCAGTCAGATGAGAACTTCTGACAGCGCGGCAGACGCACAGCAAAGTAAACAAGCCGCGCAGCAAGAATGAAGTGAGAGCCGCCCCGTCGTGTCCGTGGGATTCTCCAGGCCGGAACACTGGAGTGGATATTTCCCTCTCCAGTACTGAAAGCTACCCTTCAATGAAATATGCGTTTCTTCGTCTATATGAGGCAGGAAGCAGATGGGCCCCCCAGGGTAAAGCGACCAAAGGGAAGAGATTGGACCCTGCACAGACCACATATTTCTCGTCCCAAAGTCAGGAGACCCTCCCTGGCTGCATATGCACAAAAGAGGCTCCTTTGCTGTTCTACCCAGATGCCTTTTCGGTGGAATTCATCTTGGCTAAGATGCGTGCACACGCGGGAAGATCCTGAGATATACAGAATATGGACTGTGAGCCCAGGCAAGTCAAAATGAGCAGCCAGAGGAAATCTGGAAGAAATGCCCCACATAAGTGATTTAAACTGCCACCAGGGCGCAACTCGGGGCCTCTGTCTCTGAGTCTGCCCATGTGTCTATCCATACGTACTGTACTTTTCCTCCTAATAAATACTGTACTTGCTTCACCA TCONS_00052393 r 5' 2195 TCONS_00052393 r 5' 770 EMBV3_11435 TAATGAAATCATGATGGGAGAGGGTCGGGCACAGGTCTGAGATGGTGTAGAGATCCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12179 GACCCGGTCGCCTTCCAGAGGGCCTTGCAGGGAGCTGTATTTGATGAAAATACTAGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20413 GAGCTCAGCGTTGCTGGCGGAATAAAGACCTAGGCGGTGGACTAAAGGGAGGCTTTAATT Gene BVT0102_332387 + 0 NULL GK000004.2:56442209-56459730 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181661 1 XLOC_110666 Coding TCONS_00181661 XLOC_110666 Coding Coding TMEM168 4:56459104-56518438 j TSS135913 5004 1 TCONS_00181661_5 697 5 0.915746717678189 0.000215049106701837 1.05243388717312e-17 4.41555563054135e-05 1.86082043920579e-59 3.71940103250899e-24 1.45580836274324e-05 0.000126341115699793 2.50711845116646e-05 0.000150653338701796 1.84080711363162e-05 1.27456870676696e-05 6.71551685635738e-67 3.36449682772377e-16 2.13717890330535e-19 2.42135655801323e-14 0.000317665936986319 2.3446858748804e-20 3.49857397297193e-26 0.000280043570106084 9.13873262143842e-15 5.78020367438526e-22 4.3120917598747e-27 5.97029547066928e-30 3.1437631983947e-05 5.95633054376389e-05 7.06253008174149e-05 1.4651758277852e-27 9.25828034565826e-05 1.32737987503865e-18 7.63300687377022e-32 XM_005205440.1 TMEM168 PREDICTED: Bos taurus transmembrane protein 168 (TMEM168), 0.0 8260 100.00 0.915067945643485 XM_005250526.1 TMEM168 PREDICTED: Homo sapiens transmembrane protein 168 (TMEM168), 0.0 4747 85.73 0.823541167066347 TCONS_00181661_5 sp|A0JNG0|TM168_BOVIN TM168_BOVIN Transmembrane protein 168; 0.0 1429 100.00 0.998565279770445 0 coding 0 0 0 0 0.0560105539742608 0.719071596508247 -0.0162453152006768 0.749531838034115 ACTATCCCCTTACGTTTATTTAGCGAGTTCAGTTACAAAAGAGAATCAGCCGTGCACTCAGGACCCTCGGGCTGTGGGGCGGGTGAACGTGTAAGAGACTGGGGGAGAAAGGGAATGGAGCAGGCCAGGACTGGGGAGCTCAGCGTTGCTGGCGGAATAAAGACCTAGGCGGTGGACTAAAGGGAGGCTTTAATTAGAAAATGAAGCCACAAAGGCTTTGAAGGCGAGACTAAGGAGCCTGGGCTTTTAGCTGGTCAGTGGACACAAATTCATATATTATGCGATATATACTAAAGAGCAGCAACGCCTCCTACAGTAGTTACTGTCCTTGGGTAGCCAGTCTGCCGGTCCTGCCCCAGTTTCGGTCTAACCCGAGGCGGCGGCCTAGATGCTTGATGGACACGGCGGATCCTTCGTGCTCTTCCAGGTCACTGTAAACAGAGTCCACCAGAGAAAGTGCTGAAATAGGAGTTACAGATACATTGGATTTACTGGATGAAATACAAGCAGTTAATTTTCATAACGTGGGGAGAAAGCCCAGATTGACAGATTAATGTGTAAATCACTGCGTTACTGCTTTAGTCATTGTCTCTATTTAGCAATGACAAGACTGGAAGAAGTAAACAGAGAAGTGAACATGCATTCTTCAGTCCGTTACCTTGGCTATTTAGCCAGAATCAATTTGTTGGTTGCTATATGCTTAGGTCTTTATGTAAGATGGGAAAAAACAGCAAATTCCTTAATTTTGGTCATTTTTATTCTTGGTCTTTTTGTTCTCGGAATTGCCAGCATACTCTATTATTATTTTTCAATGGAAACAGCAAGTTTAAGTCTCTCCAATCTTTGGTTTGGATTCTTGCTTGGCTTCCTGTGTTTTCTTGATAATTCATCCTTTAAAAATGATGTCAAAGAAGAATCAACCAAATATTTGCTTCTAACTTCCATAGTGTTAAGGATATTATGCTCTTTGGTGGAGAGAATGTCTGGTTATGTCCGCCATCGGCCCACCTTACTAACCACAGTTGAATTTCTGGAACTTGTTGGATTTGCCATCGCCAGCACAACTATGTTGGTGGAAAAGTCTCTGAGTGTCATTTTACTTGTTGTAGCTTTGGCCATGCTGATTATCGACCTGAGAATGAAGTCTTTTCTAGCTCTTCCAAACTTAGTTATTTTTGCAGTCTTGCTGTTTTTCTCCTCATTGGAAACTCCCAAAAATCCAGTTGCCTTTGCATGTTTTTTTATTTGCCTGATAACTGATCCTTTCCTTGACATTTATTTTAGTGGACTTTCAGTGACTGAAAGATGGAAACCCTTTTTGTACCGCGGAAGAATTTGCAGAAGACTTTCAGTTGTTTTCACTGGGATGATTGAGCTGACATTTTTCATTCTTTCAGCATTTAAACTTAGAGACACTCATCTCTGGTATTTTGTAATACCAGGCTTTTCCATTTTTGGAATTTTCTGGATGATTTGCCATATTATTTTTCTTTTAACTCTTTGGGGATTCCATACCAAATTAAATGACTGCCATAAAGTATGTTTTACCCACAGAGTAGATAACAATAGCCTTGACAGAATCATGGCATCCAAAGGAATGCGTCATTTTTGCTTAATTTCAGAGCAGTTAGTTTTTTTCAGTCTTCTTGCAACAGCAATTTTGGGAGCAGTTTCCTGGCAGCCAACAAATGGGATCTTCTTGAGCATGTTTCTGATTGTTTTGCCTTTGGAATCTATGGCTCATGGCCTCTTCCATGAACTGGGTAGCTGTTTAGGAGGAACATCTGTTGGATATGCTATTGTGATTCCCACCAACTTTTGCAGTCCTGATGGTCAGCCAACACTTCTTCCACCAGAACATGTACAGGAGTTAAATTTGAGGTCTACTGGCATGCTCAATGCTATCCAAAGATTTTTTGCATATCATATGATTGAGACCTATGGGTGTGACTATTCTACAAGTGGACTGTCTTTTGATACTCTACATTCCAAACTGAAAGCTTTCCTTGAACTTCGGACTGTGGATGGGCCTAGGCATGATACATATGTTTTATATTACAGTGGGCACACCCATGGTACAGGAGAGTGGGCTCTTGCAGGTGGCGACATACTACGCCTTGACACACTTTTAGAATGGTGGCGAGAAAAGAATGGTTCCTTCTGTTCCCGACTTATTATCATATTAGACAGTGAGAATTCCACTCCTTGGGTGAAAGAAGTAAGAAAAATCAACGACCAGTATATTGCAGTGCAAGGAGCAGAGATGACAAAGACGATAGATATCGAAGAAGCTGACCCACCTCAGCTGGGTGACTTCACAAAAGACTGGGTAGAGTATAACTGCAACACCACTAATAACATCTGCTGGACTGAAAAGGGACGCACAGTGAAAGCAATATATGGCGTGTCAAAACGGTGGAGTGACTACACACTACACCTGCCAACAGGAAGCGATGTGGCCAAGCACTGGATGCTCTACTTTCCTCGTATTACATATCCACTAGTGCATCTGGCAAACTGGTTGTGTGGTCTGAACCTTTTTTGGATCTGCAAGACTTGTTTTAGATGCTTGAAAAGATTAAAAATGAGTTGGTTTCTTCCTGCTGTGCTGGATACAGGACAAGGCTTCAAACTCGTCAAATCTTAATTTGGAACCCAAAGTGGAATATTATTGAGAGTTTATTCTACCACTTATCACTAACTTGCCATTTTTTGTATATTGTACTTTTATTTGTAAAAAATATCTTGCTACTTCTGTAGCTGATCTTATTTTGTCTTTTCTCAAGTAATTATGGTATGTGTAAGGAGTTGGGAGTAAGCATTTTATACTAAAAGTAGTCAAAATGTTGACTTTGTCAATGCATAAGAGATGTTAAAAAATAATAACAATGCACTTTGAGGAATGTTTGTTTGCATATGCCTCTGATTAGAAAGAAGACTTGTCCCAGCCCTGCAGCGGCCAATGAAGAATTATCAATGCCTTATTTTCTAGGCATAGATTAGAGAATGTAAACCAGACAATTTGTTTACTGTTATAAGAAAACTACCAGTTTGCTTACAGAAGATTATTTTTGTGAACAATAGGTTTGAGTTCAAAACCATTTGAAGAATTTCAGACTCACACTCAGAAAAGGGAAAAGGAAGAAGTCTGCTTAAAATGAGTATGTAAAATTTGCTTATCGTACATCACATTTAGACACTTGGCTGTGACCTGTTACCAGTATCGCAGAGAAGCCCAAAGCACTGTTTAGGTACAAACATTCTTCATATAGGTAACTGTAAGAAGCTAGAGCCTACAACTTGCTCCTCCATGCCTTGCTGGGAGCCTCTGAAAGCACTGGCAATTTTAAGAGTCTTTCTCAGGGTAACAATGTTTTCTTAATAAAAATGTTTTCAGCTACAAATTCCTCCCAAATAAATTGTCTTCCCTTTCAAAATGTAATTTTATGAAAGAAATGTAGCCATTTGTCATTGATTTAGGCTATTTTCAGTATTGAGAAATGATTTTGATCTCTGTAGAGTTAATGCTCTGTCATGAAAACAATTTTTCAGATCTCCTTTAGTGGTAACACTTTTTTCTATTTGAGGTCAAAGGATTGGAAACAGGGTCATTTTTTTTTTTCTTGTATACCTGTAATGTATTATGTAAAAAAATATTCATACTGGTAATTTCAGTTAAGCATAATGGTGTGGTTATAATTTTTAAAACTTCAGTGTTTTATCTAATTAAAGTAGGCATAGATCAGGCTATCTCCTAAAAGGTCATTTACCTCCTATTCCTTTCTAATAATCCTAACATTCTAAGTTTTCATCTCTGAGAAATAACATGAAGGGAATAGATTTAAATTGGAGGATACTCTAATCTTTGCTGTTTAAATGGTGTAATCTCTCACCATAAAAGCCATTTTTTCCAGCCTCAGAGAGAGGAAATAATGCCTCTACCATTTTCTACCTGTGACTTGAAAGTAGCAGTTCTAGTTAGGAAGAAGTCACTTAGCGTCAGGGAACTTGTATACCACTATCTATGCAGCGTTGTTATATAGTCTGATTATTTCTGTGTTTTGAGTATGATTTTCCTAATGCTATGAATAAAATTTTGTCAAAAATTAATTTTTCACATAATTTGCAAACAATAGTTATTGAATATTTTAGTATATTAAAAGGGATAGTCAAAAAATATGCAAGTATTATTAGAGTTTATGGTTAGTAGGTCAGTTTGAAATTTTCTAATATTTGGTTACATATATATATCAACATCATCCAAATGAAATAGTATAGTGTTTCACTCCTACTCAGAAATAGCGTAGCAGACAAGCCAAGTGCTAAAACTATGAGCTTACAGCTACAAAAGTTTAATCAACATTAAGTAAAAACATCTTTTAAATTCCAAGCCAGTGTTGAGCAAATGAGCTTTAACTAAAGCGTATCCCTTTACTCTGAGAAAGCCAAATATAAAAGTATATCCTGTGTTGTTTATAAAGTGAAACTAAGATTTTACTAAAAATCACATTCAAAAGGTAGCAGACATTTTTACGTCACAAAGCTAATGCTTTGATATATTTTCTATAAAGTACAACTGAAAAAGGTCTGGGCTAAAAATGGGATTTGAGCCTACTTACTCACTTTGATGAAACAAAGTAACAGTTTGGAGAAGGAATATTACAGGAAAGATAATTGCTTACTTTTACCTAAGGATTCAAAAACAGATGTGACAGTGAGACTAATTTTCTTGTGGCCTCTGTTTAGGAAGGAGTTATTTAAAGTGATAGAAATTATGAAAGGGCAAAATTTTACCATGCCACTAAAAGAAATAGATAACGTGGAGATGTTTTTCAGCATACTGTTGACTTGTTTCCTTGTGTGGTACCTTGTTAAAAACCACAAAAAAAAGGTCTAAAAACATCTTTTAAAAAAAAAAAAAGCTATTATTTCATTCAAAATTTTGTTTAATTTGCTGTGACTAAACTCTTCTGGGACATTTGGATTTATCTTTTTTTGTATAGC EMBV3_25863 GAAGACGTGTATAAACCTTTAGAATAGTCTTTGGGAATCCTGCTAGTGCATTAAGTGGGG Gene GeneID:535231|ERG:NM_001102183:66_cdna Constitutive 2 NULL GeneID:535231 1 GENE ERG MGC143243 v-ets erythroblastosis virus E26 oncogene homolog (avian) EMBV3_43129 AAAAGTGGATAAGGTGGTGCTGCAGGAACTGAGTGGAAAGCTAGAACTGGCAGAGAAGGC Gene GeneID:534150|OPTN:NM_001034602:118_cdna Constitutive 0 NULL GeneID:534150 13 GENE OPTN MGC128158 optineurin EMBV3_06466 GGGGCAGGGGAAATGGAGAGTAACTGGTAACAGATACAGAGTCTGAGAGCTATGAAAATG Gene BVV0102_355587 - 1 EMBV3_39196 GK000008.2:44619119-44631682 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225152 TCONS_00225153 1 XLOC_137694 Coding TCONS_00225152 XLOC_137694 Coding Coding CBWD2 8:44573002-44625301 j TSS168645 1908 1 TCONS_00225152_1 398 0.293501048218029 16 0.963822708325366 0.00268787786513401 0.00121110296701685 0.00166336498943734 0.00062601751381618 0.000916508450203549 0.000604692094648635 0.00054663266902311 0.000248654089689223 0.000588626385474065 0.000278014156473653 0.00138094085874782 2.14926060780349e-05 4.59120188740453e-05 0.000733690858482038 2.04394652562239e-05 0.00341764849037537 0.00041699996927319 0.000258176464523866 0.00372216844691995 0.00233945201853583 0.000385898500112648 0.000452435618688491 0.000737150253504227 0.00228472470271338 0.000873353132532818 0.00104082123213845 0.000389760259046057 0.000470290818478342 0.000231117828901504 0.000424406000902983 XM_005210001.1 CBWD2 PREDICTED: Bos taurus COBW domain containing 5 (CBWD2), transcript 0.0 2760 100.00 0.801362683438155 NM_201453.2 CBWD3 Homo sapiens COBW domain containing 3 (CBWD3), mRNA. 0.0 1636 89.50 0.640985324947589 TCONS_00225152_1 sp|Q8IUF1|CBWD2_HUMAN CBWD2_HUMAN COBW domain-containing protein 2; 0.0 699 88.16 0.994974874371859 2 coding 0 0 0 0 -0.0290997299641351 0.875703810019422 -0.0365972222098855 0.745679462621281 GCGTTTTGCGTGCGCAGCTGCGGGTTGTGGGGGTCTTGATCCCAGGTCCTGAGTGTGGTGGGGAGAGGTGAGCTGTGGTGTTTGCAAGATGTCTCGTGCTGTTGACTCGGCGGATGAGGAAGAGGAGCAGGCGGAAGAGGATTGTCCTGAATTGGTCCCCATTGAGGCGAAGCAAAGAGAGGTGAAGGAGGAGGAGGAAAAGTCTGGCCCCGGCGCTAAGATCCCAGTCACAATTATCACCGGGTATTTAGGTGCTGGGAAGACAACACTTCTTAACTATATTTTGACAGAGCAACATAGTAAAAGAATAGCAGTGATTTTAAATGAATTTGGGGAAGGAAGTGCAGTGGAGAAATCCTTAGCTGTCAGCCAAGATGGAGAACTCTACGAAGAATGGCTGGAACTTAGAAACGGTTGCCTCTGCTGTTCTGTAAAGGACAATGGCCTTAGAGCTATTGAGAATTTGATGAAGAAGAAAGGGAAATTTGATTACATACTGTTAGAGACCACTGGATTAGCAGATCCTGGTGCTGTAGCTTCTATGTTTTGGGTTGATGCTGAATTAGGGGTTGATATTTATCTTGATGGTATCATAACTGTTGTAGATTCAAAATATGGATTAAAACATTTAGCAGAAGAAAAACCTGATGGACTTATCAATGAAGCTTCTAGGCAAGTTGCTTTGGCAGATATCATCATCATCAATAAAACAGACTTGGTTTCAGAAGAGGATTTAAACAAGTTAAGAACAACTGTTAGATCAATAAATGGACTGGGAAAAATTTTAGAAACACAGAGATCAAGAGTTGACCTTGCAAAAGTATTAGATCTTCATGCCTTTGACAGTCTCTCTGGAATAAGTTTGCAGAAAAAACTTCAACATGTGCCAACAACACAACCTCATCTTGATCAGAGTATTATTACAGTCACATTTGAAGTACCAGGAAATGCAGAGGAAGAAAGTCTAAATGTTTATATTCAGAATCTTCTGTGGGAAAAGAATGTGAGGAACAGGGATGACGCCTGCATGGAGGTCATACGACTGAAGGGGCTAGTGTCAATCAAAGACAAACCGCAACAAGTGATTGTCCAGGGTGTCCATGAGCTATATGATCTGGAGGAGACACCAGTGAACTGGGAAGACGACAGTGAGAGAACAAACCGATTGGTCCTTATTGGCAGGAATTTAGATAAGGATATTCTTAAACAACTATTTATAGCTACTGTGACTGAAACAGAAAAGCGATGGACAACACATTTCCAAGAAGATCAAGTTTGTCCATAACACTAGAAGTATCGCCAAAAGGACTGGATGATAAAAGCTTCCTAGGTGGTTCAGTGGTAAAGAATCCACCTGTGGAGGAGACATGGAGGTGATATTGAAAGAAGTGAATCCGCAATGCAGGAGACATGGGTTCAGTCTCTGGGTTAAGAAGATCCCCGAAGGAGGAAATGGCTTCCCCACTCTAGTGGGATTGCCTGAGAAATCCCGTGGACAGAGGAATCTGGCGGGCTACAATCCACTGGGTCACAAAGAGCCACTGACACAACTGAACAACTAAACAACATTATTTTGTACATCAATTTTATTTAGATATAATTCACAGAAAACTTACCCTTTGAAGTATACAATTCTTGGCTTTAGTATATCCCCAGGTAAAGGAGAAACCATTACAACTATCTAGTTCCAGAACATTTTCATAGCTCTCAGACTCTGTATCTGTTACCAGTTACTCTCCATTTCCCCTGCCCCTATTTCCCAGCAACCACTCATCTACTTTCTGTCCCAATAGGTTTGCCCATTCAGACTCCTTTCACTTACCATAATGTTTTCAAGGTTCATCCATGTTGTAGCATGGATCAACATTTTGTTTCTTTTTATTGCTGAATAAAATTCTATAGACCACA EMBV3_28302 TCCATGCCCAAGATCTCCAGGCCTAGAGAGGTGGAGCTTGGAGAGGCTGAAGAGAGATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01803 TGATCAGCATGAACAGGCCTAAGATGGGGTCCAGCTCTGTTTCCTCATTCACAGGAGCCT Gene BVV0101_010364 - 1 EMBV3_25378 GK000003.2:26222382-26244066 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176308 1 XLOC_106086 NonCoding TCONS_00176308 XLOC_106086 NonCoding NonCoding - 3:26240704-26241689 - TSS131067 985 2 TCONS_00176308_2 84 0.170558375634518 1 0 0.000124316081699134 0 2.81848656416055e-05 0 0 2.54206830731853e-05 8.45788646549976e-07 0 0 0.000397989934341835 2.78885360632102e-06 0.000108904061237995 0 6.82232608678575e-07 0 0.000144198819604029 2.40787387127823e-06 0 1.21335628328096e-06 2.92037220191591e-05 4.40280028729349e-07 0 0 0 0 1.02182273326582e-06 0 9.75145041243634e-06 0 0 XM_003587167.2 LOC100847983 PREDICTED: Bos taurus uncharacterized LOC100847983 (LOC100847983), 2e-93 347 80.98 0.352284263959391 0 noncoding 0 0 0 0 0.0377144455935331 0.805810928224858 0.0176082664623843 0.729531870580303 AATGCAGGAGATGTGTGAGTTTTATCCCTGGATTGAGAAGATCCCCTGGAGGAGGAAATGGCAACCGACTCCAGCATTCCTGCCTGGAGAATTCCATGGACACAGGTGTTAAAGCCACGCGTTCTGGGAAACAAACTCACTCCGAAGGACAATGCAGATAGTGGAGTGCAGTTTATTACACTGGCGGGCCCAAGGCAGAGTCTCCTCTTAGCCAAGGACCCTGATCAGCCCACCACCCCAATTTCCTTGAGACGTACACAAAACAGAGGAAGGGTAAATACAATCACAATAACCCCATCATTCATGCGTTAGGTGTTCAAACAGTTAATAATCAATAAGCCTGCGGTTACATCCCAATAGATACAGAAAGGGTTTATGACCTGTCCGGAGGCAGGCGTGATTAGAGTATGTTTTCTCTTAGGCAATGAGTAACCTGGATGTGATCTTCAAGATTCCCCTGTCCAGAGGGGGTCTTATCCTTCTATTGTAGTTTCCATAGGCACTAACCACAGAGTTCAGAGTCCATTGGAGAGGTGCCCGAGCATGATCAGCATGAACAGGCCTAAGATGGGGTCCAGCTCTGTTTCCTCATTCACAGGAGCCTGGTGGGTTACTGTCCAGAGTCGGACATGACTCTGTGGGGTTACTCGGTGGGTTACTCTGTGGGGTCACAGAGTCGGACATGACTGAGCACACACACACACTCTCCTAAACAGTGCCCGGAAAGGACACTGATAGTGTTGATTTAATGTGCCTTCAACTGACATGACCCACCTGTCGTGTCAAATGGGTATAGTGTGTGTATGTATGTTGTTAAAATCCCTGTGGAGCAGTGAGTGTATGCCAATCCTCACACCTCACAGACGGAAAGAACTGAGGTGCCTGGGGAATCTGCAACTAGCTAAACACCAGACAGTCAGCAAATGTTCCTACCAGCCTGGGAGCCAGGGCTTCTCAGGTGACATTCCCTTTAACCTGGTGTGTG TCONS_00172647 TCONS_00172648 TCONS_00172649 TCONS_00172650 . 3' 2241 TCONS_00172647 TCONS_00172648 TCONS_00172649 TCONS_00172650 . 3' 3225 EMBV3_26072 ATTCGGAACAGCTCGGTGTACTGAGGCTGCGGCCACCAAGGGCCGTCCAGCCGAGCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31696 GCTGCCTCAGAAATCCCTGGGTATTCAAGTGGTAACGTAGAAGTAAAGAGGTCAGTTTGA Gene GeneID:538366|SNX18:NM_001083731:79_cdna Constitutive 2 NULL GeneID:538366 20 GENE SNX18 MGC155086 SNAG1 sorting nexin 18 EMBV3_10157 GAGTCATCCTCATCAACTCCCCTATCGAAGGAGACCGGCCGGTACCCTGCCTACAAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19201 GCATTGATTACCAAAACTTAATTTCCACTTTCCATAGCTCAGAATCTTAAAATCCAGGGC Gene GeneID:616337|PPAPDC1B:XM_002698735:202_cdna Constitutive 2 NULL GeneID:616337 27 GENE PPAPDC1B NULL phosphatidic acid phosphatase type 2 domain containing 1B EMBV3_04210 CAGTGGAGGATGGTTCTACAAAACGGCAGGCCCTCATGTGGTTCGTTGCCACTTAACCTT Gene BVT0102_102685 + 0 NULL GK000023.2:42826345-42877589 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11425 CTCACTCACAGGACCTTTAGGATCAAGCCACCCAAGGTTCAGGGACAACCCAAGAGGGTT Gene BVV0102_084614 + 0 NULL GK000013.2:62413980-62420835 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049518 1 XLOC_029649 NonCoding TCONS_00049518 XLOC_029649 NonCoding NonCoding - 13:62416699-62418620 - TSS36694 1921 2 TCONS_00049518_3 80 1 0 2.83303318682658e-05 4.70774351272306e-05 0.000226412755019657 0 0 0 0 2.46317964164191e-05 2.87511852015388e-05 0 0 0 1.49364020607733e-06 9.79492909719297e-06 0 0.00164986789977664 0.000345700806323352 0.00425800743962407 0 3.36923863288947e-05 0 0.000231774445773149 0.000315194054305765 0.00131778208875975 6.13139436663418e-05 0.000117363305748683 3.35505927005747e-05 2.00004169140605e-05 1.51627547387791e-05 0.000222212077804204 XM_001253180.3 C13H20orf112 PREDICTED: Bos taurus chromosome 13 open reading frame, human C20orf112 (C13H20orf112), mRNA. 0.0 2769 100.00 0.798542425819885 NM_001256798.1 C20orf112 Homo sapiens chromosome 20 open reading frame 112 (C20orf112), 0.0 1802 85.51 0.798021863612702 0 noncoding 0 0 0 0 0.0412449193848144 0.795383622010733 0.00621664829865887 0.895003059620299 GGGAAAGGATGGTTTGGGGGAAACGGCCGCATCTAAGACCTTGCTTGAGCACTGGCCGCGTTCAGGTGAGGCGTGCATTTGCCGTGCCCTCTTCCTCACCTGCAAGCGGGGCTAGAGCACCTCCCTGGGCAGGCGGCCATGAGACACAAGATTTCAATTTGGTATGTGCCTGTGCTGCGCACGTGACAAGGACCAGGAAAGGTCCATTTCTTTCCCTTTCTGATGGGTGAGGTGCCAAAAAAAGTTCATTTGTTCAAAATCTAGCAAGGATCTTCTGTATGCTAGTTTATTGGCTACTGGTTGAAGGGTTTTTTGGGGGCCAAACAAGTTGGAGGGAACAGAACTGGCTGGCCATCTTGTGGACAGGACACCATAGAAATAAAGCATTCGGTTTGTTATTCAGTGTTTATTAAGTAGATTCAGTCTTATATATGATATACAGATTCAAAAGAAAAAGGATTCCACATACTTATGAAATCAGTGCATTTAGCAAGTAATACCATGGAGATAACAGCTCGATTAACAGCTCATTGGTCTTTTGTTAAGTGAGGGGAGAGGGAGTTGGCCTGTGCTAGTCATTCCACAAACGAAACAGAATTGAGTTGCATCACATAAAGAAGACACATTCTAAGAATTAAAATATTAAGCCACATTTACTGGAAAAACTCACTATAGAGAACACAAATCATTTTTATAGAGCGTTGAGGAGGAAGTCCTCACCTGCTTAGAAGAGCCACGTTAAGTTGCATAGGTGCATATCTGTAAAAATATAATTTAGAGGTGAAGCCACTGACGAAGTAATTGAGTCACCTTTAGAAGTTGGTGCCATCTGCTGTTTGCCTTAAGTGCCATATGCTTCCTGTCTGGAGCCCCCTGCCCCTCCCCAGAGGTCATGCCTCCAGGGGACCCTGAAGAAATGCTTCTACCATCTGCATCGGAAAGTCTTAAAACTCATCTCAGGTAGAGAACTTGGCCTCTTCCCAAATATGTCTAGGGATTGGCAACCCTCTTGGGTTGTCCCTGAACCTTGGGTGGCTTGATCCTAAAGGTCCTGTGAGTGAGCATGACCTCCCCATTCCCAGGCTGCCAGGAGAAGAGCTCTTTCCTCCCCAGCTCTGTGGCCAAGTCCTGCTGTCCCACCTCACAAGCACACGTGGTTACCCACCCGCAGCCGACCATAAGTCTCCCTTCTGAGCCTTGCTTTTCAATGGACCACATGACACAGGCATATGGCCATCTGCCGCACAGAGATTTTTCTGAGCTTAGAAAAGTATTTTTCAGCAAATCTGAGTTCTGTGTGGTGTAGGGTTTTTGTTTTTGTTTTTAGGTGGAAACGTAGGTAAAACGTGAGAGGTTTTTGTTTTGTGGCTTTGCTAAGCAGATGAGCTCAGTGAGGTGCACCTTCCTCCTCAGGAGCGAGTCTTGCAGGACACACAGGGACTGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCCAAAATTAGGAGCAAAAATACAAAGGTTCACATTGGTCTTAGGTAGATACAGGCGAAAAAGGACTGAGCTGTTTAGCTCATAAACAACAAAAACAAAGTTTCTAAAGCACCACTAAATTATATAAAAATCAGACCATGGACGGATTGAAACTGGTATTCTGGTGAAATACTTTACTATCTTGTAAAAAGTTTTACAAAAAATTACAAATTAAAAGTATCAACCCTCTGAGTTCAAAGCAGCATTTTGAAAATGAACTGGTAGTTAATCCTATAACCACCCCTGTAGTGGAAAGTGGCCCTTGGGGATCGGGATGGCTGGGTTCCTCCTGTTTAAAATCCTCTAAAACCTTTCTAACCCCCTGCCGGTCCCCCTCCCCCTCAACACTGTCCTCGGGTATAAGCTGAGTGGTGACGACAAAATGAACTGTAGATGGGTTAT TCONS_00045879 TCONS_00045880 TCONS_00045881 . 3' 2216 TCONS_00045879 TCONS_00045880 TCONS_00045881 . 3' 4136 EMBV3_17288 AGCTAGATTTCAAGCAGCAGGAAGACAAACTCCAGCCAGTTCTGCGGAAACTTCACCCGT Gene GeneID:784700|LOC784700:XM_002698567:92_cdna Constitutive 0 NULL GeneID:784700 26 GENE LOC784700 NULL hypothetical LOC784700 EMBV3_19781 GGTCAGTATTCCTTTGCTGTTACTCTGGAGCTGTAACTATCAGTGTCTTGGATACACCAC Gene BVV0102_267539 + 0 NULL GK000006.2:62881872-62893071 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205310 TCONS_00205316 TCONS_00205315 TCONS_00205311 TCONS_00205312 TCONS_00205314 TCONS_00205313 TCONS_00205309 TCONS_00205317 1 XLOC_124628 Coding TCONS_00205315 XLOC_124628 Coding Coding ATP8A1 6:62888240-63128536 j TSS153353 8231 1 TCONS_00205315_3 1032 34 0.965887762958031 0.00051895984978702 2.27808162070754e-07 0.000214780873966999 1.66198959312676e-05 3.77582412654176e-07 9.33378862004219e-05 0.000382707441934129 0.000346581687997598 0.000501556391518671 1.07782368696298e-09 9.48085176746669e-12 4.04815608372281e-06 5.68513943883283e-05 2.42558927705073e-10 4.68254088065698e-08 0.00159159231459304 1.1774908914438e-07 0.00102015223735917 2.99240504845563e-05 6.267195476528e-07 0.000405319511051768 0.000313663887576702 1.82655095443242e-08 0.000714460748223875 0.000582195797248791 8.0637217560175e-10 1.64464799000078e-05 3.04320688489068e-08 3.79128502100904e-05 9.30549671127487e-16 NM_174838.2 APLT Bos taurus ATPase, aminophospholipid transporter (APLT), class I, 0.0 4657 99.73 0.315757502126109 NM_006095.2 APLT Homo sapiens ATPase, aminophospholipid transporter (APLT), class I, 0.0 4594 80.21 0.612562264609403 TCONS_00205315_3 sp|Q29449|AT8A1_BOVIN AT8A1_BOVIN Probable phospholipid-transporting ATPase IA; 0.0 2031 88.42 0.999031007751938 4 coding 0 0 0 0 -0.00605180998877336 0.95849385216291 0.000679131943044614 0.991669768426428 CCCTTCTCCCGCCTTCTCCGCCGCGCTGCCGCGGGAGCGAGTGTGCGACGGCCTTTCCCGGCAGAGGCGCTGCCCTGGGTGGCCGGCAGGGCCCGCGCGGCTGCTGATCGCTCGGCGCAGGAAAGGCAGATTCCTCGCCCGCGCGGCGCCGTGACAGGTGCAGGGTCTGGTTTAAGGACCCACCTGCGGCGGCTGCTGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGGTCCCGAGCCGAGGGTTATGAGAAGACTGATGATGTTTCAGAGAAGACGTCACTGGCTGACCAGGAAGAAATAAGGACTATATTCATCAACCAGCCTCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCCGCTAATTCATTTTTTCTCTTTATTGCACTGCTCCAGCAAATACCTGATGTATCACCAACAGGTCGCTATACAACACTGGTTCCTCTCTTATTTATTTTGGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTAAACGACATAAAGCTGATAATGCAGTAAACAAGAAGCAGACACAAGTTTTGAGAAATGGTGCTTGGGAAATTGTGCACTGGGAAAAGGTAAATGTTGGAGATATAGTTATAATAAAAGGCAAAGAGTATATACCTGCTGACACTGTACTTCTCTCATCAAGTGAGCCCCAGGCCATGTGCTACATTGAAACATCCAACTTAGATGGTGAAACAAACCTGAAAATTAGACAGGGCTTACCAGCAACATCAGATATAAAAGACATTGACAGTTTGATGAGACTGTCTGGCAGAATTGAGTGTGAAAGTCCAAACAGACATCTCTATGATTTTGTTGGAAACATACGGCTTGATGGACGCAGCACTGTTCCCCTGGGAGCAGACCAGATTCTTCTGCGAGGTGCTCAATTGAGAAATACACAGTGGGTTCATGGAATAGTTGTCTACACTGGACATGACACCAAGCTAATGCAGAACTCAACAAGTCCACCACTTAAACTCTCAAATGTCGAAAGGATTACAAATGTACAAATTTTGATTTTATTTTGTATCTTGATTGCCATGTCTCTTGTCTGTTCTGTGGGCTCAGCCATTTGGAATCGAAGGCATTCTGGAAGGGACTGGTATCTCAATCTAAACTATGGTGGTGCTAATAATTTTGGACTGAATTTCTTGACGTTCATCATCCTTTTCAATAACCTCATTCCTATCAGCTTGCTGGTGACATTAGAAGTGGTGAAATTTACCCAGGCATACTTCATAAATTGGGATCTTGACATGCACTATGAACCAACTGACACTGCTGCTATGGCTCGAACATCTAATCTGAATGAGGAACTTGGCCAGGTGAAATATATATTTTCTGACAAAACTGGTACTTTGACATGCAATGTAATGCAGTTTAAGAAGTGCACCATAGCCGGAGTGGCTTACGGGCAGAACTCACAGTTTGGAGATGAAAAAACATTTAGTGATTCATCATTGCTGGAAAACCTCCAAAATAATCATCCCACTGCACCAATAATATGTGAATTTCTTACAATGATGGCCGTGTGTCACACGGCAGTACCAGAGCGGGAAGGTGATAAGATTATTTACCAGGCAGCATCTCCAGATGAGGGAGCCTTGGTCAGAGCAGCCAAGCAGTTGAATTTTGTTTTCACTGGAAGAACGCCTGACTCAGTGATTATAGATTCACTGGGGCAGGAAGAAAGATATGAATTGCTCAATGTCTTGGAGTTCACCAGCGCTAGAAAAAGAATGTCAGTGATCGTTCGCACTCCATCCGGGAAGTTACGACTTTACTGCAAAGGAGCCGACACTGTAATTTATGACCGACTGGCAGAAACTTCAAAATACAAAGAAATTACCCTAAAACATTTGGAGCAGTTTGCTACAGAAGGGTTAAGAACCTTGTGTTTTGCCGTGGCTGAGATTTCAGAGAGCGACTTTCAGGAGTGGCGAGCCGTCTATCACCGTGCCTCCACATCTGTGCAGAACAGGCTGCTCAAACTCGAAGAGAGCTACGAGTTAATCGAAAAGAATCTTCAACTACTGGGAGCCACAGCCATTGAGGATAAATTACAAGATCAAGTGCCTGAAACCATAGAAACTCTAATGAAAGCAGACATCAAAATCTGGATCCTTACAGGAGACAAGCAGGAAACTGCCATTAACATTGGGCACTCCTGCAAACTTCTGAGGAAGAACATGGGAATGATTGTTATAAATGAAGGCTCTCTTGATGGAACACGGGAAACTCTCAGTCGTCACTGCACTACTCTGGGTGATGCTCTTCGGAAGGAGAATGACTTTGCTCTTATAATTGATGGGAAAACCCTCAAATATGCCTTAACTTTTGGAGTGAGGCAGTATTTCCTGGACTTAGCTTTGTCGTGCAAAGCTGTTATTTGCTGCAGGGTTTCTCCTCTTCAAAAATCTGAAGTTGTGGAGATGGTTAAGAAACAAGTTAAAGTCATAACACTCGCCATTGGTGATGGAGCAAATGACGTCAGTATGATACAGACGGCACATGTTGGAGTAGGAATAAGTGGCAATGAAGGCCTTCAGGCAGCTAATTCTTCTGACTACTCTATAGCTCAGTTCAAATATTTGAAGAATTTGTTGATGGTTCATGGTGCCTGGAACTATAACAGAGTCTCCAAGTGTATCTTATACTGCTTCTACAAGAATATAGTCCTCTATATTATCGAGCTCTTTGAGAGAGTTTTCTGGGTTCATTGTTTAAATGGCCTCTTCCACTCAGTTATTCTGTTTTGGTTTCCACTAAAAGCCCTTCAATATGGCACTGTATTTGAAAATGGGAAGACTTCTGATTACCTGCTGTTGGGAAACTTTGTTTACACAGCAGCCATGTTGTTCAGTTCTGGAGTCTTTTGGATGGGCCTGTTATTTATCCCTGTGGCCTCCTTGCTCCTTGATGTGGTGTATAAAGTTATCAAGAGGACTGCTTTTAAAACATTAGTAGATGAAGTTCAGGAGCTGGAGGCAAAATCTCAAGACCCAGGAGCAGTTGTGCTTGGAAAAAGCCTCACAGAGAGGGCGCAACTGCTCAAGAACGTCTTTAAGAAGAACCACGTGAACTTGTACCGGTCAGAATCACTGCAACAAAACCTGCTCCATGGGTATGCTTTCTCTCAAGATGAAAATGGAATCGTCTCACAGTCTGAAGTGATTAGAGCATATGATACCACAAAGCAGAGACCTGATGAGTGGTGATAGGTCGAGGGGCTGCAAGGCCAGCTTGGCTACGTCTCTAAGGAGAGTCCCAGGTCTTCACCAGAATCTGCTGACCAATTCCAGTCTGGTCCAAGGAGGGGAAATGGATCTGAGCTCATCTCATTGACTGACATTCAGATTCATGTATATTATAGACGTAAGCACTGTGCAACTATACTGTAACACCATCTCTTTCAGATTTTCTAAAGTATTTGCTAAGTCTTTGTAAACAGACATTGAAAATGACCTTGTATCTTGCCAGAGTGTTTTTTTCAACTGAGAAAAGGTCAGTATTCTTTTGCTGTTACTCTGGAGCTGTAACTATCAGTGTCTTGGATACACCACAAGGCTATTCACCATTAAAAATCTGTAAAATGGTAGTAAGTTAGAGAGACTCTTGATATCCAAATTTAGATTTCAGAACATGCTGGGAGGGGGCGGGAAACAGCCTTCTTAAGGAAGCAACTTACTGAGCAAAATTTCTAAACAAGACATTAATGATAAGTGTTTGTGTCAAAAATTGTCTTGATAAATGTCTGCCAAAGAAGTTCAATAAATGTATTACTATTTCTCCTTCAGTAGTCATTTGCCCAGAAATTTACAAGAAAGTTTACCTCCAGTTCTGCTGTAAGATCTGCATGCCTGACTTTTCAAATCTAAGAGTGATTTGTAAAAATGAGTATTTCAAGGCATTTGCTACTAATATCTGTGATGTTGCACCTTTGGCCTTACAAATGCTTCTTTCTCGTTTGTCTTGTCTGTTTGTTCAAGTGGAAGTGCACAAGTGGTTATGTGACTGTCGTTACAATACTGATTTTTAAAACTGTACTTATTGTGTCTCCGTCCTTTCTAATGAGGTTTCATCATCATTGAGATTTTTCTTAGAACCTGGCTTCTGCTGTAGATTAAATGATGTCATTTTGTCTTTGAGTTTTCTTTTTTTATTTTTAAGAAAAATGTACTTAAGTGTTTATGTGAGATTTCCAATACTTCTGTGGAAGTGTTTGAAAAACCATGGCAGATAAATGCCTGGGCTTTTGTAACGCCTGTAGGCTCAGCTTTTTGTCCTGTGTCTTGGTTTTCCCTAGTAGTGCCCATTCCAGATGCCTGTGGTCCTGGATGGCACGCCCCAGGTTAAGATGACTGCCCTGAACTTATAACCAAGAATAGCTGAACAGTTCACTTGTCAAGCAGCTCCCAAAATTAGTCACATGCTGCTTACTGGAACAAATAAGTAGTACTTTCCCCCCGTTTTAAAAACACCTATTTTATTCAAGCCTATAACTTTACAAAGAGATCTGTTCATCATGAGTAGATTTTGTTAACATGCTTTAAAATATAGATTCCATTTAACTGTTGCGGCATTTCCAAGATATCTCCTGAAAATGCCTATTTTGCTATGCCAACAATTAATGGAGAAGGGGCTGTTTAAAAACCACAACCAGTTTTCTACACTATTTTTAACATAATGCTTTCATGTAGAAATAAAAAGAATTCTAGCTTTCAGATACATTTCAGAGATTGAAGCAAACTTTTTGCCTTGTATTCAAAAGCCTGTTTGCCTTTAAGTGGACTTACCAGCAAAACAGATAGAACTTCCTCTTTAAAAAAATAAGTCAACTACAATTAAGAAGAGAGGTGATTTTCAAATCATTCCTTGAGTTTGATAATTTCACATCTTTTTCACCCTTTTTCTCAATCTAGATTTAAAATTTTAGTCTATATATTATTTCCTTCTCTGAATTTTTAGCTCTTTAGTTACATGTATGCCTCCCACATTTTCTACAAATGTGAGAGGTTATGACATACATAACTTGAATTTAAAAGGGTTAAGAAGGTGACATACTTCACTCTCCACACCCTTTCCATTCGGAGTTCAGATTATGAAAAGCATGAATTCAAATATGCAAGACCACAGGTCTAAGAGTCTAAGATCATCTTCAAAATTCAGATGTCACAGTGTTTGTTACTGAATGGCTATTCAGAGCATCTGGGCCTCCGTGATGACAGGTGAAGTCAAACCACAAAAAAATGGAAAACAAGAATCAAGTAAAAGGAATAAAGGGTTTTTTTTAAAAAAAAAAAAAAAAGAATGAAGTACATCCCTCGGGAGAAACACTTAATAGCAGTTCCAGAGAAGGGCTGCTTCCATTTCCCCTCACCTCACAGGTGACATCCTTCTCCATAATTTTAATGTAAAAATGTGATGAGTGTAATAGAACTGAATTTTCTGACTTAAGAAAACTGGAAGCTTTATTTTTACCTTGAAAGATGATTTGTTTCTGTGGAGCTCTTCAACATGAGTGGAGGACTCATGGTTAATAATGTGAAAGAGCATGATCTGAAACATGACTGATTTATGCCCTTTTGTCCCATGGACCTGTTTTTGAGTTATCAACATTAAGTAAATCTCTTAGCTTCTCGGTAGGGAGTTGAGGGGTAGGCAGCAGGGAGTGACCACCTTGGTAAAACTTAAAAGACAACATTGCAACTGCAGTGACTTTGTAGTGTTAGAGAAAACCCTCCTTTTTTTAACCTTCCTAAGTGGGGTGGGGGTGGGGGTGGGTAACACAGTTTTACCAGGATTAAAATAAATAGTTGAAGTGACTTTTAATGTGTATTTTCTTAAATAAGGGACATTCTTCAATTAAAAAGTCCCTTATAGGGACTCTTGCAAATGCTAACACCATTGCTTTACAATGTTTACAGTTCAGAAAATACTACTCACAGCAGAAAATCCTCATTTATTTTGCATTGAAAAGTTGGAAGTTGCTTCTTTAGCATTGACTAGTACACAGTGATATTGAGCATGAACTTTCTAAATGTTTTATATATACATATAAAAATATATTGGTATTTCACACCCAGAAAGATGCTATATGGTAGAAAGTATGAGCAGGAAAAATGGTGTTTCTCAGGAATGTAGTAAATTTTAAATGGAATAAGCGCCATCCACCCTCCCACACAACACTCTGGCTGACATGAGCCTGCTTGGGCAACGTGGTGAAGTTAATGGAAAACTTCTTCTAATCAAGTCAGGTGAATGTGTATTATATTCAGTATTAGCCATTTACGTGAATTGTGTGGTCACTGAATGGAATCAGCAATTCCTCTTTATTTCCAGGGGGGAAAAAATGAATTCAAGAAATCTACATTTATTCTGGTCATTACATTTTATATTTTAATTTTGCAGTCCTGCATCCTAAATATCCAGTGTGAAAATCATGTGATAATTTGTTCTGCATTGTGTATGCTGTACATCACTTATCTGTCACTTAAAATGTTCTTTCAGGAAATGAATACTAATCTGAATGTACTAGATTGCATATTCACAAATTTTTATGTATAACAAAATCATCGTTATTACAAAGCTAAATAATCATTAGTGTTTATTTCTGTGCAGTTTGCCCCTTGATATGTCCTGGTTCTAAGACTTATATCATCTGATAAATCTATAATCATGTACAAAATTTATTGAGCAAATTGCCACCCTGTTCACATCATATGAACCAGGCCCATGGAATTCTTTTGTAAATTACTTAATGTAAACACCATGCAGTCTGGTGCCTAATAAATGCTTTTTAATGATGAACATTACTATAATGCCTCTTAAAGAGACCATAGTCTGATTTTTCTCACATTAAAATAAGTGAAGTCACTTGTGAAACTGTTATACTTTGCTGCATTTTAATTAACCTTCAACAGCTATTAAAATGGAATGTAAGTTGAATTTTGAAGGAAAGGAAATAAATGTTTTCCATTTTTCGTCTTGATTTATTTTCTGTATGAGAGCAGCTGTGTTTTTGATAGGTTTATGGTTTGCATGAATTAATATTTAAAGTGGTCTAGGCCAACGCATGGCTATTGCTGTAAATCTTGATGTTTATTTCTGCCTTATAAAATTCTCTCATGGCCTACCTGAGACTTAATATTCAATGGACAAATTAACTGGTCCTCCACACAACTTTTTTTTTAATAAGTAAATTATTTTACAAACAAATTTGAACTAATTTAATTGAAACTTTTGTTTAGCTTGCCTCTAAGAACTTTGCTTAATAAAGCTCACAAAATTTCTCAGCAAATAAATCTCCCTTAAGTAGGGGGGAAAAAAGCTAGATTTCATACTTGCTTACTTTGAATTAACAGCAACTTTCTATAGGTAAATCTGCTCTTGCAAAGATGTGAGCAGAATATTTAAAAGTACGTGTTTTTGTTTCATAGTTCTAGACTAGAAGCCATAAATGCAGTAAATACTATTTGTTGTTTGTTTTACTACTTCAAGCTTCGTTTTTCACATTTTCAAGTTTATTAGGTTAAAATAAAAAAAGGCAGCCTTGGAAGGCAGCTACTATGGAAAATTGCAGTTTGCATTCAAAATAAAATAGAATTTTCAGCTCCATGAAAAACCATTCCTGCTGAAACTGCTATAGAAATTGTGAAGCTGCATGAGTGGAGAGTACCGAACCTGTGTTTATAGTAGTTTTCTCAGGTGTGTTTATCTCGATATTCAATGCACTGTGTTTTATAAATAGTTATTAAAGTCGAGTAATATTCAGTTCTATGCAGTGTTATATGTCACTGGCCTTTTGTGAATGTGCATGTTTTAAACTGCAAATTTTAAACATTTTTGTCCTCTTATTAAAAATGAAATAAACTGTACCATTACATAAAGAAAATTGTTCGTTTTAATTGCTAGTTTTAGAAACTATATTTCTTCATAAAACCTTCAAAACTGCAATAACTGTAGTTTGAGCAGGTGTATATCTGTTTAATAACAATGTTGACATTTTATCTACAACCCCAATGATAATTGAAAATATCCCTGCATTGTAAATCCCATTCAATGCAATATAAAGTGGGGTATATTAACTCTAATTTTATACGAGTTGGTAGTTAAATAATTATCAAAAAATAATTTTTGGACTTCCCTGG EMBV3_21093 ACTTCCAAGGGTTCAAGGGTTTGAGAACACTTAGATAGGCATGTTTGCATATTCAGAGTG Gene BVT0101_016015 + 0 NULL GK000005.2:10342661-10409386 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193979 TCONS_00193969 TCONS_00193980 TCONS_00193978 TCONS_00193970 TCONS_00193973 TCONS_00193974 TCONS_00193976 TCONS_00193977 TCONS_00193972 TCONS_00193975 TCONS_00193968 TCONS_00193971 1 XLOC_117636 Coding TCONS_00193973 XLOC_117636 Coding Coding LIN7A 5:10404373-10546620 j TSS144848 6114 1 TCONS_00193973_2 162 0.0690219169120052 6 0.957060303980428 0.0001976581550857 1.3072416546629e-08 0.000215504742101958 1.5563660826664e-08 2.268130662357e-13 0.000172405047319326 2.47691936889417e-05 5.37179237623725e-45 0.000287031492153099 0.000202704853220264 1.94142632772397e-11 1.05511339360897e-17 1.10826784261466e-08 7.26623332315901e-15 9.31013842163053e-100 3.89118781429465e-12 1.71770902319092e-20 0 1.72234035524314e-07 7.81725553145736e-09 2.55924767121009e-09 3.18023604379446e-23 2.68356300250943e-79 3.73519575236027e-31 0.000170449709262535 5.56971474170903e-100 0.000652128416852916 2.44089610496649e-08 1.24243028297738e-14 2.67556835743032e-17 NM_001079602.2 LIN7A Bos taurus lin-7 homolog A (C. elegans) (LIN7A), mRNA. 0.0 1335 100.00 0.120870134118417 NM_004664.2 LIN7A Homo sapiens lin-7 homolog A (C. elegans) (LIN7A), mRNA. 0.0 1368 91.66 0.155381092574419 TCONS_00193973_2 sp|Q32LM6|LIN7A_BOVIN LIN7A_BOVIN Protein lin-7 homolog A; 2e-116 333 100.00 0.993827160493827 1 coding 0 0 1 0 -0.179904943129355 0.269440030664606 0.00478244083011185 0.935802561297122 GCCCGAGGCTGGGATCCGGGATTGTCGGCGCCGGCAGGCCTAGCCTCCCGGCGGGTGGGCCCGCGGAGAGACTAGAGGGGCTTCGCATTGGTCGGGGGTCCGGGGCCTAGCCTGGTGGCGCCCATCTGTCTGAGGACAGTGTGGTTGTCCCAGCCCAGCCTAGCCCCCGCGGCAGAAGGTCTGCCCGCAGCAGTTTTCAGAGCTGCCAGCGTGGTTGGGGCAGGGTCCCAGGCCGCCCGGTCAGCACGCAGGTGCTGTAGGTAACCCGCCGCCATGCGGGGTGACTGCGGCCGCTGAGGGCCGTCTGGCCGCCTCAGGTTAGACTGTGGCGTGGACGAGCGAGCTCCGGGGCGAGCGCTGCAGATGTTGCCAGAGCAATTGAATTACTGGAAAAACTGCAGGAATCTGGAGAAGTACCAGTGCACAAGCTACAATCCCTCAAAAAAGTGCTTCAGAGTGAGTTTTGTACTGCTATTCGAGAGGTGTATCAATATATGCATGAAACGATAACTGTTAATGGCTGTCCCGAATTCCGTGCCAGGGCCACAGCAAAGGCTACAGTTGCAGCTTTTGCAGCTAGTGAAGGCCATTCCCACCCTCGGGTAGTCGAACTGCCAAAGACAGATGAAGGCCTTGGTTTTAACGTGATGGGAGGAAAGGAGCAAAATTCTCCCATTTATATCTCTCGCATCATTCCTGGAGGGGTGGCTGAAAGACACGGAGGCCTCAAGAGAGGAGACCAGCTGCTATCAGTGAATGGAGTGAGTGTGGAAGGAGAACACCATGAAAAAGCCGTAGAACTGCTTAAGGCTGCCAAGGACAGTGTCAAGCTGGTGGTGCGATACACCCCGAAAGTCCTAGAAGAAATGGAGGCTCGCTTTGAAAAGCTACGGACAGCCCGGCGTCGGCAACAGCAACAGTTGCTAATTCAGCAGCAGCAACAGCAGCAGCAGCAACAAACACAGCAAAACCACATGTCATAGGTCCTTGACGCTCCTTGATCAAACACTCGATTGTCACAAATTTGAAACCGTGCTTCAGAATCCCAGCACATAGTAAAGGAAAAGACAACACTAATTATACCTGTCAAGAAACTGTGAACACGTGGTGTATAAATTCTTTACCAAGACAACTCGACACCTTCTTTCTCTGGGGCTGAACCCCCGCCGCTCACGTGCTCTTTCCACACACCGACCTTCCATTCACGGCAGTGAGAATTCTCAGTGTGTGAAGGGAGAGGTTTTCCAGTCTGCAGACGGAAACAGTACAAGAAGAATAAAGTCTGTGACTTTCACATAAATCACCAAGGCCAGGGTTAAGTGAATCTTGGGTCTATAGCTTTTCCAGAGATTAATAAATCCCTTAGTAGGCTATAGTTCAAACTGCATCAGTTCAAGGTTGTCGCTACTTAAAAGAAATCTACACATTGCCCCTCACCTAGACCTGTTCCGCATCTGTAATGCTGAGTTGTCCAAATGAGAATTCCAGTTAATTGCAAATTCAACTTCTGTTCCCTCCTGAAAATGGCAAGTTATTATACTGTATTTATACTCTATTCAGGTTCTAGAATCAATTGGCTTTTTATTTTCCATTTCCATGAATTTTATTATGCATTAATAGGCAATTTCAGCTCAACTTTTAGTTCGTTAGAAGCAAGGATAGAGAACGCTAGTACTATTTGTTTTTTTTTTTTAATTTAAGTTTTGTATCTATTCTTATTAGTTCTAACAGAAGATAATGTTTATTTATTCCACAAAGTAAATATTATCAGAGTATATTTGCTACAAAATTAGGTTCTTACCAAGTGTTATGAATCTGGCAAGAGAATACAAACAAGGATGAACTGATCCTCGTATAATATTTATATATAACCCTTCTCTAAATATTTTTTGTTAACTTTATATTTTTGACTGAAAAACCGAAGAAATCTCAACTGTTTTTACCTACACTGATATTTTAAAGCCTAGGGCTTTACAAAACCAAATTATAAATGTGCATATATATACAGAAATACATCATACAAAATCTAGATCAGTTTTCTCAAATATACAATAGATGTTTTTGGCAATATAAGATCAAAAGTGTAATTCCTTTTCAAATTAGGCATATAGAAACCAGTGATATTAATATTGTGAGTGAAAAGTTACTGCTGCTTCCAGGGTGAAGATATACCTGCTTCATTACACATGTTCATGTAGGTGAATGGACAGTGAGACATCTTTTTCAGAAAGTATCATATACTGGAAAATTACCTGTTGGAGGCACCTATACTGATCATAACTTTTAACTTGTGAATCTAGGCACATAAGTCTGATTTTACTTTATGGCATTAGCAGGAGGCAATAATTATTTGGGCACTTAAATACCTTAGCCACACACATGTACCCGAAGAAAGAATAAATGTCCAGTTGAAACATTCTAGAGAGAGCATTAACACGGAGGGAAATATTTGAATATTCCCTTTCCTCAAATGCAGCCATTGACTCCCCAAGAGACAATTATATTTCACATTTCAGATAGTCCCCCAAATTAGAAATTTAAGCAGCTCAGTTTAGGAAACGTTTCATTTTGCCCTTTCCAGTGGTCATTCCAGTCAGTATCAAATTCTCCTATTCATAGTCCATCACTCAGCAGAGGACAGACAGCAAGGAAACCAAGAGGTGAGCCTGCTTCAGCAGTGTCCTGCCATGGTAACAGATTCCCATCCCTGCACACATATCATTTTTTACTAGAGAGAATGGAGCTGGGGGAGGGGCGGGAGGGGGGCAAGGGTGAGGACCCTGAATGTTATGTAAAATAGGTTTACAAAAGAGATAAGCATGACTAAAGGGAATGAATGGAGAATATGTGAGTAGTATTCAGTTTGAAAGAGGTAGTTCTCATTTTTATAAGAAAAATTTAATAAAACATATATTTTAGTTATCATTTAACAGAAAAATATTAAAAGTTATTCAGGCTATGCCACATACTCTCATAAAGGGAAATCATTGCACCCTTATAATGAGGAAATGGTCATTTCAACACATCTCAGTACATTGTATAAATTTGGAGCTTAAGGTATATTTTCATTTAGCTGTAAGTGGTTGGTTAATATTAAATTATCATGTGTTTTCACATCAGCATAAATATTGTCATGGTGTTACAGAAGCAACTGTCAGATGAGCAGATAGCTTACATTGGTGTTTTTAGAAGTCTTTGTATTTTATGCTTCATTTGCATAATATTAAGTGCTAATAAATGTATGCCAAGTCATCTAAGTGAAGGGGTAGTCCATCACACCTAAGGCATCTAAGGGCACATTACATGTCACATTGGTTCTGCTTACAAATGACCAGCCAAATGGACAGTTTTCTTTAGTAAAATCTAGTTGTTGAAATATAAGCCTTCCTGTGAAGTTTACATCAAAAGTAGCCATCCCTAAGACTTAGAGAGGTCCCTTGTGGTTCCCTAAAGATTCACTGAAGCCAGAGGGAAAAGGAAAAAAATTACTACAATTTGTATTAATGCCTTTTATTATTACTGATCACATTGGAGCCACTGAGATGTCCAAAATCATATCAAAATAAAGACATAGGTTGCTCCTATATGAAGCTCAAACTTTAATATCATAAACAAATGAGGTATTAAAAGGGTGAAAATGTTTTGTAACTATTCATCAGTGATCCTCGTGAAATTTAGTGGTTTCCCTTGACCTGATTGGTAGCCAGATTTTTCTAAACTCTTTCCTGCTATGATTTTTGAAGGCAAAATACACAAAGCATAGTTCACTGAAAGAATCCTCAAACCTTTTCATTGAGGCATTTACATTTTGATTCTGTTGCTATTTGAAATAGAACATCCACAGGGAGATAATGGGCTGAAATTACAATTGACTTTGGAAAGAATAACAGATTTTGTGCTTCCTCAATCATATAATCAATAGGGAATTCTCTAGTTATGTGAACTACCACTATCTTTTAAGACAATGCTGAGATCTAAATGCAAAATCTATCATTCAGGAGCCTTTTAAGAATTCAAGGCTGTCTCTGAGGAACTTAGCTAGAGATGGATTACACTAATTTACAAATGCAGTTTTCAACCGTGACAAATCAAAGTGATCTGATCTCAGTTCATTTTACTAAGCTGTGCCCATAGGACTCTGAGATATTGAGCTATTTTGTCTACATTATTTTTTAACATCTACAGGTATTTGTGGATGTGTCAATAATGTCTGAATTTCTCATCTTTTGGCTTTATCTTGAACACAGCTTTTTAGTAAGACCAGCTTTCAGAGCATCATGAAGTAGAAATCAATGCTCCAGAGATTCAGGGAGACCAACATAAGGGAAAATCTCCCAAAACATGGAGGTAGTCTTGCCCATCTCATCCCTCTCTAGAATATAAAATGTCTGAGAAAGGGCTGTGACTGCCTTGTGGACTGCTGTCTCCTAGCATCTGGAAAAATGCCCAGCACAATAGAGGCACTCAGTTAATATTTATTGAATGAATAAACAATTACATAAATGAATGAAATTAAATAAATGAGTTTTACCTTCTGATAATTTGAAAAAAAAATCACCAATTCATTTTATACTGATGGGCATTATAATTTCTGAATTACATAATTAGAACCAGAATTGACTCTTCATACTTTTTAGATATATGAATTTGAAATCAGTTACTTCCAAGGGTTCAAGGGTTTGAGAACACTTAGATAGGCATGTTTGCATATTCAGAGTGTTTACAATGAATAAAACTCAGCCTTTCTTGTTATTTTTGAAAGCTCCCTGAGTTATGATCCATACATGGAACCCCATTTATAAACTTTGTAAAATATAATATTTTAATTTTTAAAAAAGAAAATTTAAATTATCAAGCGTATTATTAATAATATGTCCTTCAATGTTCATTAACAACTTTTCTCTAAGGCAATTCATTGTGATTAGAGACACCATCTCTAAATCTCCTGCTTTCAAAAAAATCACTTTTCCTTTCTCATTTGATCTTTAGAATATATCTGAGCTAAAGATTAATCATATAGCAATTAAGACTTTTCCATGTGTTTATTCATCTAACAAACATTTATTGTGTGCCTACTATATGCTAGGTTTTGGATGTAAAATGGCAAACAAGACAAATCTAGCCACCCCTTGGAGTTTGCTGTGAGGAACTCAACACTTGCTCTAGCAGTTAACTAGAGTTTACCATCTCATGGTTCCTTCTTCACAGCTGATAGGAGAAATGAAATCCCTAATGCCATGGAAATCATAAAAGGCTCTCTGCACATATTTATGTAAGCTTGTTTTTCTAAAATACCACACAAATATGCTGCTCAAGGAATCCAAAACCATAGTTAGATGCCACTGAGGTAGGTACTAATTTACTCATAACTGACACATAGCTCTTACTAAGTTCTGTGCTCAGGACACTCATAGACTCTATCACTGAATCCCTTCAACAACTCTCTTTAGTAGGTTCCATTTTATCGACAAGAAAACTGAAGCACAGGTTTGTGACCTGTCCAAGGTCACACAGCAGATGGAACTGGGATTTGAACCCACACAGTGTAACACGAGAGCTCATATGTCTTCGCATTTTCTGTGGCTTGGGGGATACCATTACATTAAAATAAATGTGTCACTGTATATAAAAAGTACTTTGAAATTGTAGTATACAAAGAGATTAGTGAAGTGTGATCAGCAAACCACAGCAGTGGCAGAAACAGAGTGGGAACTCAATCTTATGTTGCAGCTTACTCTCATGAAGAATATATCAAGCCAGGGAAATGGATAAACATACAGATTCAGACAGTTTCTGACATGCGATAAATATTGCAATGACTTTTCAGAATTATTTGTTGTTAGCCACTGTGTCTATTTGGTGCTACAAAAAAACCTGAAAGAAACAAAATCCCTTGCTATAAGGGCTTATCATAATTACACAGTGTGGAGATGAGTCAAGGATGTTTCAGATTTATGGGGAAAGATTGGGCGATAGTAATACTATTTTCTCACCATTGCATGTGATTGTGTCTTTCTAATTGTTTTCATTATTTTTCTGAAAGAGCTGCAAAATTGTGCAGTGGTTCAACCTGACCAAAGTGGTATTATGCTGCTGGGAAGTAAAAGTACTAGA EMBV3_20821 CTCAATTCTGGAATACACATATGTGGAAAAAGTAGAATGAGAGGTTTCAGGGATTTTTGT Gene GeneID:509305|COG6:NM_001035069:73_cdna Constitutive 2 NULL GeneID:509305 12 GENE COG6 MGC127384 component of oligomeric golgi complex 6 EMBV3_27189 CAGATCCATCTCACACACAAGGGGAAGGAAATCCACAGGGCTTGAATGCCAGAAAGCATG Gene BVV0101_060873 + 0 NULL GK000021.2:47245413-47286265 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121428 TCONS_00121426 TCONS_00121427 TCONS_00121429 1 XLOC_073410 NonCoding TCONS_00121426 XLOC_073410 NonCoding NonCoding - 21:47252072-47254522 - TSS90460 1804 1 TCONS_00121426_3 155 0.450665188470067 2 0.264189465087791 0.000196090819923259 0.000186174625268672 2.01299329862302e-05 0 8.34715170473729e-05 4.16382605032354e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 1.16602814627066e-05 1.43161494251711e-14 0 0 0 0 2.1154583709361e-19 0 0 0 0 XM_005206391.1 VDR PREDICTED: Bos taurus vitamin D (1,25- dihydroxyvitamin D3) receptor (VDR), transcript variant X1, mRNA. 5e-65 253 94.48 0.08980044345898 0 noncoding 0 0 0 0 -0.343608470471739 0.193195345320081 0.0152002800457667 0.751008514602577 CCTTTGGACGGCAACGCTTGTTGGTTCTTTACTAACAAGCAAGCACAGACCCAGAGCAAGCCTTTCATGCTAACAAGCAAACAAGCCATCAGGCTGCAGATTTCAAAACCAGAGGCAGGAGGCAGATGTGAAGTGGGTCAAAATTCTGCGGCTCCTCAGAGAAAAAAAAGTTGAGAGAGAAAGGGGGAAAAAGTGCCTTTGTCCTCCTTAGCCCATTCCCAAAGCACATGGAAAAGTCAACAGTTATTTCATAGATCATGTGTCCACCCATGTATTTCTAAACTTTTGGAAGGCAACGAACACTGCCTGGGGCAAGCAGTAAAAGACACTTACTCTGCTCAAGTCCAGATTGTAACTTTGGAGATCTCCGACCCAGGGATCAAACCTGCATCTCCTGCATCGGCAAGCGGAGCCACCTGGGAAGCCCCTTTATATGTACAATTATTTTCATTTAATCCCACCCCAAACCCAGTGGCATGAATGCTATTATTACCCCTCTGTCCCTAGATGAGGAAATGGAGCTTCAAGGAAGTTACTTGCCCAGAGTCACACAGCTGGTATAAGGTAGAGCCAGAACTCAAACCCAGGGAGTCACAGGAGAACGTGGAGAAAATACACTGCATGTATGTTTCAGGCTCACTGTCCTCAACGAACTACAGTATAACTCAACTCTCCCCAGGATGTGTATTTGGTTTATGTCCATGGCGCAGGTGTGTAACTACATCAGTGCTTGCTTTTGTAGGAAGATGGTTGATACAATTATGTGTACTTTCCAACTTATTAAAAGAGATATACCAGAGTTATGTCCAGAGGCATATGACCATTACATCACTGCCTGTACCCCTGTGGGCCCCAAAAGGGGCCGGATTAAAACGTCCAAGGATCCATGCTTTCTGGCATTCAAGCCCTGTGGATTTCCTTCCCCTTGTGTGTGAGATGGATCTGTTTCTAATACATAGGATACAGCACAATTGATGGGCCGTCACTACTGAGATTGGGTCACAGAGACTGGCTCTCTCGCTGGTTGACTTTGAAGGAAGCCCGCTACCATGCTGTGAGAGGCCCTAAGGAGAGACCCACTTGGCTAGTGAGTGATGTTTCTGGCCAACAGCCAGGAAATTCAGCTTGGAAGTAGATCCTCTCCCAGTTAAGCTTTGAGAAGGCTCCAGCCCCAGCTTGACATCTTGACCGCAGCCTTGTGAGACCTAAAATCGGAGGCACCCAGCTAAGCTGCTCCCAGATTCCCAACAATTAGAAACTCAGGTAGTAACTGTTTGTTGCTTTAGATCACTAAGTTTTGGAGTAGCTATCTACACGGATAACCATGTGTGCTTACTACAGGTGAAGGGAGGACAGTAAGCCTGCCTATTGTGAGTAGCCTCTGGGCGAACTAATCGAGAACCTTGGTCCAAGGAACGGGGCACAGAATGTTTTCTTCAGGCCATGTCCTGTCACTGGAACAGCAGCCCGGCTGGAGCCAGGATGTGGCTTCAGGAGCAGTCTACTCTCTTTGTCAATGGGTGGACGGCTCCGCTTTCTTCCAGCCTACTTATTATATCAGGACTGATTGTGCTGATTAGCCCAGGGGAAAGTGAAATTGAACTAAATTTGTAGCTCTTGAAAAAAGAACCAGGTCTAAGGCAGAGGACGGAGAAAGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGGCGGAGGAGCCTGGTAGGCTGCAGTCCATGGTGTCGCTAAGAGTTGGACACGACTGAGTGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAAT TCONS_00119574 r 5' 32443 TCONS_00119574 r 5' 31437 EMBV3_42334 CCAGTGGCGCCCATGGCGAGGAGGGCTCAGCCCTTTCCCTGGGGAGATGGTAACCATACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19191 GGATGTCTGCCTATAGCCCCAACTCCTGAATTCTATGGCAAAGTCAAAAGACGTGAACTC Gene BVT0101_023102 + 0 NULL GK000002.2:95700855-95781393 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105937 TCONS_00105936 TCONS_00105935 TCONS_00105942 TCONS_00105939 TCONS_00105934 TCONS_00105938 TCONS_00105940 TCONS_00105941 1 XLOC_062674 Coding TCONS_00105937 XLOC_062674 NonCoding Coding KLF7 2:95776538-95845457 j TSS78056 5403 6 TCONS_00105937_3 67 3 0.921646014103717 0.000332797583391565 0.000284675980119356 7.58775775932365e-10 4.91230329862212e-05 5.72804763652355e-08 2.79134518574801e-11 6.76401850826824e-05 5.7776259582465e-05 2.70283060564715e-08 2.6871908342471e-10 1.13762892306891e-16 3.3824453068779e-12 1.11657681016853e-11 1.07206489870935e-11 0.000356020626033738 0.00164171759991085 1.13878078853381e-09 0.00100840200255128 8.3790528860349e-10 6.51656074470952e-09 1.64238169980778e-09 0.00172717561763618 6.80392334277764e-07 0.00173434664845216 7.17007285395909e-05 0.000177128034932924 5.16496409310271e-06 1.25911567041425e-05 7.08765947156059e-11 5.05011342012855e-10 XM_005202751.1 KLF7 PREDICTED: Bos taurus Kruppel-like factor 7 (ubiquitous) (KLF7), 0.0 8002 99.95 0.822135850453452 NM_003709.3 KLF7 Homo sapiens Kruppel-like factor 7 (ubiquitous) (KLF7), transcript 0.0 6071 85.02 0.996853599851934 0 noncoding 0 0 0 0 -0.045536289056377 0.687285134275988 -0.0395436188187183 0.418900960028111 CGGATGACCTCACTAGGGCTCACCAGGTGAGAAGCCTTATAAGTGCTCATGGGAAGGGTGTGAGTGGCGTTTTGCACGAAGCGATGAGCTCACAAGGCACTACAGGAAACACACAGGTGCAAAGCCCTTTAAATGCAACCACTGCGACAGGTGTTTTTCCAGGTCTGACCACCTTGCCCTCCATATGAAGAGACATATCTAAAAAACCTGAAGGCCAGAGTTGCCATGGCGTCGGCCGGCCGTTGTCTGAAGGAAATGCCACGAGGCAGGGGGCTGGACTTCAGGCGGGGACCCATTGCCTCGCAGAAGAAAGTTCTCACTTATTAAACCTCTGTGTACACACACACACAGACACACACACACACACACGCACTCACACATAGACACACACACACACAGTCATGCACTCAGCTATATTTAAAATATATACGTCTATCTTTATGCCTTGCCCTAGCCAGATGGTAGAAGAAGAAGAAGAAAGAAACCAGGTGAACTCAGCAAGGCAGTCTGGCTGCTTACTTCAGCGCTATTGGAATTATTTCCCGCTGTTGCCAATGGAAATCAAAGAAAATGGATGTGACGTCTCTACAGGTGGACGGCAGTAAGAGGGGCTTATTTAACTTGCTTCTCAGTGCAACTTGATAGGAGAATACAACGTCTTAAAGTTGCATATGTGTAGCACTAATGTTTCTTTTTCAATAGTTGGGGGGAAATGACCTAGCAAACCAAATTGCAGTTTGGTAGCCAAAATTAACTCTCGGTTTATTTGTCCTCTGTGTGTGAAAAGTCCTACTATTCCGTGCGTCCGACTTCCTCACAGAACTGTTGATCAGTTTTGGTTCTTAGTACTATTGAGATCTTTCCAGTCGATACCAACGGCCTTAGCGGCGGCAGACTCCGGAATAACACCTTACACCTTTCTGGCCTGCATTTCTCTAGACTTCACTCTCCAGGTCTCCAGGGAAGAGTGTTCTTTTCTTACTTTTTGACTCTTGCACACCATATGCACTAGGGATTCTGGAAACTTCTAGCATGACTGCAAAGTGGCCAAGAGAATAAAGTCCTTGATGATCAATCACAGTGTATCCCTTGAGCCTCACCTTATTGCCAGTGCTAGATTTTTTCTTTTTAATCTCTCTGTTTTTTGCTAACGAAAACTTGAAAAGCTTATTTGGAAGCTTAAATGTTTTATCTTTTCTCCATGGACTAAACCTCTCCAGGACTCTCTCTCTCTCGTCACCTGGATGTCCAGCTCTCGAAGCAGCCAATCAGATGGGACATCACACTTTTTTCATCCCCCCTGAGGCATCCTGACCTCAGCTCATAGTGATCAACCCCGTGCTGTGTGTCACTGCTACCCTAACAACCAGTTTCAGCGTAGATGTAGCTAGTCTCAAAGGGCAGCTGCATATTGAACGTAACTCTGGGTTATGACCTGACAAAAAAAGCCAAAAATATCCCTCTTTCCAGGAATGGGGAGAACGGAGGATGCCTCCCAAGTCTAGTGGCTTCAAAAACCATCACCCTCTCTTCCTGTCTCATACCCACTGAGTCATGTCACCCCACTTGTTAAAACACACAATTCAAAATGCTGTTGTGGGAATAAAGGGTGGACATTTAAGGAAAGGGTTGAGATATTTCTCTCATGGTCTGTGTAAAAGGAGAGACATATTTCTGATTTTTTAATTTTTTTGGCTAGGCCCACCATGACTTGTGCCCTAGAGCACCTGGGATCAACAGAGGCCTCACTTTTACTCTGCAAGCTGACTCCGAGGGGGTTCCATGCCTCACTTTCCATCCCCCACACACATCCAGTATCGGTCTCCATCATCTACCCGCATTCTTAGCTAGTTGGCACTGGCCTCAACTCCAAAGACTGCCTTTAGGACCATTAAATGGCCTATGCAAGCAAGTGGGGTGGTTATTAGGGCAGATTGTATATTTTGTATATTCTGGGACCATCCCTTCAAGACACGTCTAAAAAAACAAAAATGGCATTTGGTCCGCCCATGGTTGCTGCTCCTTCATACCAGCTGGCTCCTCTCCTGCCCTCCTTTGACTGTTTGACTCATTGACTGTTAAAATGCCACCCCATACCTATTTGGGATGCAAAACTGAAGTCTTTGAAAGGAAATATAAGAAACACAGATTCATTTATGACAGCAAACTTCAAGATCCTTGGCATTTGGTTTCTCAGCTTTCTGCAAACTTTGATTTCACTGAAATGTTGAAACTACTCGTCTGAGGGCAGAGGAGCCTCCTTATCACAAATGCTGTAGCTGCCAGTTGGACACTTGGGGCATTCTGAGGTCTGGCCCTTCAAGTTTTCTTTCTCTTTTTTCCTTTTTTCAATTTAGACCAAAAACAAAAAAGAAAAACCACCCTAAACACACACACAAAATCTGCCCATTTGCCAGAGGCAATTATGTATATGTTAGTCAGAGGGTATTTTAAAAAATCAGTTTTATTCCAAAGATTTAAAACTAGACATGACTTAGAAACATTTCTGGAGCACTGCTTGCTGACAATCTCGTAGTTCTCGACTGCATTCGAGTGCGTTTGTAGCCAGTCCATCAGGGCGGACCATGGGATTATATTTGAATGTGTGGTTCATCCTTTCTGGATGAAGGATGTGTGAGGGACCTTGAACCTCAGCTGTATTAAACTGTAGCGCCTCCAGTCAGTGCACTAGACGAAACTTTAGACACCCCAGATTTTGTTGGTTTGTTGATTTCCCTTTCTAGAGCAGCCTCCAGCATGACTGCACGCACAGTCCCAGTGATGGCATTAGCCGTGGCTGCCACGATTTACAAATGTTCTCTCCCCCGCTGGAGCTGCTCTTGCCTCTCGAAATGCTATTATTAAGGGTTTATAATACTTAATTTAATTTTTGAACTGACCAATGCAAGGCTCTATTAAAAAGAAAGTTTAAAAAAATGCAAAAGAGTAATCATTGCTTGTTCGCTCCCCGTTGTCATTTGTGGTCTTGAAAAGATCTCATTTGAATGTGACAGAACAAAGGCCCTTGGGTCTTCATCAGTGTCTGAAATATTGGGCAATTCTCCTCTCTTTTATATCAGTGAGGTCCTTTGTAATCTGCTCCTGACCTTTCTCCAAGCAGGGCGCACTGAACCTTGATGGTGGGGCTTGCTGGCTCCAAGCATTTGTTGACCGAGAATTGGCCTGAGAATTTGGTGGGTGCTAAGCGTATGGCTTTGAAACTGTTCTTGTGTAGCCTGATTGACACCTCTGAACGCTAACCAGTCCTGTCTGTTGTGGGGTGGGGAGAGCGGTAGTCATTTGGGCATGTTATCAAGTATCCATCCTCTCTGAAATGGCAGAGATGGTTGGAAGGAGCCTGCTGGAGTGAACAGGCTTTCTGGGAAATAACCTGAAGCTAGTTTGCTTCCAAGAGGACAGGTTATTCAAAGCAGTGCTTTAGTGGACAGTTGAAACATATTAAACCATTGTCTCGTTTAAATTGGTAACTTCCAGCATTCCAGGATACCTCCAATTTGAAAGGAAAAACCTGTCATGGTGTTTCTTGTAGTGGTCCTCCGAAGCACGCTTTATCCAGGGTTCAGAGTGTAATGTATAGAAAAAGAGTGTTTCGAAGCCATTGACAGTTTTTTTTTTATTTTAATTTGTGCTTCTTTCTCCTACCACATGACTGTAAGTCAAAGATGTGGAAACCTGAAATTATAATGCTGCTCCTAGCTACTGGCCTCCTGCCCCACTGATGGTTCATTGGCCCAGCTTAATGCCTGGTGGTTGATGAGTATTATGTCCAGAAAAAGAGATGTTTGGATTCCATGACAAAGCTGCGTTTTATAAATATATCGGAGACCCCCCAAAATGAACTTCATGCTGACCATTTCCTTCTCCTCTCTGTGCTCTTCCTTACAAAGCCCTTCAAGTATCCCTTGTCCACCCCTCCTGCACCTCTTGTGCCCTTTTTACATCTTTGATTGCCTGACGATAACAGGGTAAAAAAGACAGCCAACCTCACGCATGATTAGTAGAACTGATTCCTATGTTAAAAAAAAAATCTTTGAATCTAGAAGCCAGAGAAGATTTTTTTTTAAGGACTTCAGTTTGGGATAAGCTTCCAGATTAGCCATGTCTATTTGCATCAAAGGGGAAGTAAATGGGACTTGCAGGGCGGCTCACCCAGTGCATTCAGGATGTCTGCCTATAGCCCCAACTCCTGAATTCTATGGCAAAGTCAAAAGACGTGAACTCAAATGGCAAGAACAACAGGACTTGGTGATTAATGTTACTGGTTCATAATGGTTTCCTGTATGGAAGTCACTTCATAAAATATAAAATACAGTGCAAAGTGCAAAATGGCTTCTCTTTTGCATGAGTTGGTTTTAGGAGAAGGAAGGTTGGGAAAGTCAGAGATGCAACATATTAACTACAAAAACCAGGTTCATTGTTTCTTTAAAAAAAAAAAATCTTATGAGGTCCAGCATTTCTGGCCACAGTTTTGCACCCAGATCTTTGCCAAAGTGAAAATTCATTAAGTAGAACCTGGTTGACATCTACCTGGGGACACTTTCCCTGGCATCTTCCTGAAGTGGCCACTGCCAAGTCGGGGGTGGAGGCAGGAGGAGAGAATTTGCATTCCAGCTCTGGATGTGTTTCGGTAAACATGGTGATATCTCAGTTTGAAAACTAGAGGGGCTGTTCTGAGTATACATCAATGCCTCTTTGATGGTCTACTTTCCTCAGTGAGGATCTTTGGGAATACTTGAGATGGAACAACAACAACAAAATGTGTCAAAGGAAGCAAAAACTCCTTGTAAATGTGAGATCCCATGACTAACTGCCTGAGGCTTCAGGGTTTTCTCTTACTTTTAACACTCGCTTAAGTCTCCTCTGTTGGTTCCTAATGGATCCCGGTAAAGGGAAAAATAAAGCTGCAATTTAACTTTCTTATGTGCACCCTTCCAAGATAGTACTGTATTCTTCAGGTGTTTTGCATTTACGTATAAGTGCTCGGGAAACAGGTATCAAAAATGGAGAGAGAAATCCCAGGCCGTCACTTCACGAATATCCCAAACGAGATACTCTTTTTCAAACAGGGCTCCCTCTCAGCAGTCACGAGGGGACGTTGATGCGTTCTTTGTTGGGGACTGTTTATACAATTTTTTTTCAACTGTGAGCTTTGGAATCGTAAACTGCTTTGACTCCAGCTTCTGTCTACTGCCATAAAAAAGGACCCCACACCAGAATAATGAGGGTGGTATGTGTGCATGCAGCTAGACACGTGTGCACGTGTACCTAATGTACCTTCGCAGAAGGAAAACAGTTAGGCTACTGACGTTTACGAGGAGTAGCCACCAGTGCCTAATATCTTTTGGGGGGATGGATGCTTATAATTGCCAGTATATTGAAAAN EMBV3_13753 AGTGTGCCTTGAGGAGTCACTTTACCTGGATTTGCCCAACCTCATCACCTGTGACCACCT Gene BVV0102_205941 + 0 NULL GK000011.2:25201564-25583530 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05281 ACGCCCTGTTCCCTAGAAACAAAGCCAGGCACTGATGGCCGAGGCAAGCTCTTGAAACTT Gene BVT0102_008326 + 1 EMBV3_06568 GK000006.2:62544162-62632293 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205305 TCONS_00205306 1 XLOC_124626 Coding TCONS_00205306 XLOC_124626 Coding Coding BEND4 6:62627796-62661182 j TSS153348 6080 1 TCONS_00205306_1 444 0.0148026315789474 5 0.818032050322001 0.00183885892666674 0.00165637051831021 0.00188546652981894 0.00145768186622841 0.0017966947279179 0.000592872305398474 0.00109032893773513 0.00106600327864127 0.00147794070322947 0.000331419122405106 0.000410807899683665 1.67898731004016e-06 0.000507746011289778 0.000765005624072832 0.000412629663192401 0.00105647713010184 1.0388602569225e-07 0.00181821883493877 0.00182611692034182 0.00166662439209511 0.000825532810580627 0.000634907503264001 0.000231267374890158 0.000737877508418505 0.00204377526195769 0.00165221598305702 0.00138922312677992 0.000118003766867366 8.0110363346369e-05 0.000131584751973404 XM_005207892.1 BEND4 PREDICTED: Bos taurus BEN domain containing 4 (BEND4), transcript 0.0 2592 100.00 0.236184210526316 NM_001159547.1 BEND4 Homo sapiens BEN domain containing 4 (BEND4), transcript variant 2, 0.0 2832 81.32 0.479276315789474 TCONS_00205306_1 sp|Q6ZU67|BEND4_HUMAN BEND4_HUMAN BEN domain-containing protein 4; 0.0 693 90.11 0.993243243243243 0 coding CGAGGGGGCGTGCGGCCGGGAAGCGGCCGGGAGGCGCAGGATGGAGGAAGAGATGCAGCCGGCAGAGGAGGGGCCCAGCGTCCCCAAAATCTACAAGCAGCGCGGCCCCTACAGCGTCCTCAAGACGTTCCCCGGCAAGAGGCCAGCGCTGGCCAAGCGCTACGAGCGACCCACCCTGGTGGAGCTGCCGCACGTGCGGCCGCCCCCGCCGCCCTTCGCCCCGCACGCCGTGGTCTCCATCAGCAGCAGCGAGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGTTCCAGGCGCAGGGATCTTTCCCCCCCGGGCCCGGCCGGGCCAACGCCGCCGCGTCGTCGTCGTCTCCGTCCGGCACCCCCGCCGCGTCCCAGGGCCACCTGAGGACTACGGCGGCGCCGCCCGCGGCCGCCGCCGCCGCGTCATCATCCTCCTCGTTCGCCGCCGTCGTCAGGTACGGGTCGAGCCCGGCGGCCTCCGCGGGCAGCAGCAGCACGGGCGGCGACGGCGCCAGTCTGGAGCTCAGCGCAGAGAGTCGTATGATCTTGGACGCTTTTGCTCAACAATGCAGCCGAGTCCTTAGCCTCTTAAATTGTGGAGGCAAACTTCTAGACTCCAACCATTCTCAATCCATGATATCTTGTGTGAAGCAGGAAGGCTCAAGTTACACTGAAAGACAGGAACCATGTCCTGTTGGCAAAGGGGTCCACAGTCAGACCTCAGACAATTTAGACATTGAAATGCAATATATGCAAAGGAAACAACAAACTTCTGCATTTTTGAGAGTTTTCACTGACTCCCTGCAAAATTACCTGCTCTCAGGGAGCTTTCCAACTCCAAACACCTCCTCGGTCAGCGAGTACGGCCACCTGGCGGATGTGGATCCTCTGTCAACATCCCCCGTGCACACGCTAGGTGGCTGGACCTCCCCAGCAACATCTGAATCCCATGGTCACCCATCATCATCTACGCTGCCTGAGGAGGAGGAAGAGGAGGAAGAGGAAGGCTACTGTCCCCGATGCCAAGAGCTGGAGCAGGAGGTGATTTCACTGCAACAAGAAAATGAAGAGCTCAGAAGAAAGTTAGAGAGCATCCCAGTGCCCTGCCAGACTGTCTTAGATTACCTGAAGATGGTGCTCCAGCACCACAACCAGCTCATGATCCCACAGCCAGCTGACCAGCCGACCGAGGGAAGCAAGCAGCTGTTGAACAACTATCCTGTCTACATAACGAGCAAACAGTGGGATGAGGCTGTAAATTCTTCAAAGAAAGATGGGAGGCGGCTCCTTCGATACCTCATCAGATTTGTTTTCACTACCGATGAGCTTAAGTACTCATGCGGCCTTGGAAAAAGGAAAAGAATTCATTAGGATGCACTGTACCTCCAACCCCGACTGGTGGATGCCCTCAGAGGAGCAGATAAACAAAGTGTTCAGCGATGCTGTGGGTCACGCCCGGCAGGGGCGAGCCGTGGGCACTTTCCTGCACAACGGAGGTTCCTTTTATGAAGGGATCGATCACCAGCCTTCCCAGGATGAAGTCTTCAATAAAAATTCCCAGGATGGATCTGGTGATTAGTGGACAAAATCTTTCCACACGAGCAGCCAGTCCTCTCGAGTTCCAATGGTGAATGTTCTGTTACCATCACTTTAGAATCCAAAGCATGTCACTCTGTCAGACTTTACACATCCTAAACCTTAACTCTCTTGACCTACTGCCAAACAGCTCCCAATACAAGTTTGGAAAGTGTATGGAGCCTGCAGAGGTTTTCAGAATACTATATTATACAAAGAAAAAACTACAGTTGATTTCAGTTAGATGGTGAGGGTGAAAAAAGATAGGTGAGTTCTTTCGCCTGTCTGATGCCTTCAGGTAAGCTCTGCTTCGTGAGCAGGGCTGGTCTCCATGGAGGTTGGTGTGGTGCTCATGGGAGAAGCTGGAGACGCAGCATTGTCCTGAGGGACACGGAACAGGCATTCTCATTTTAGTTCAGATAAGTTGTCTTTATGTTTTCCAAAGACTTGAATTTATACTTCTCAGCAAAGACATAGGATAGGTGACATTGTATGTTGTGTCTGCATTGACAAGAACCTGTTACTAAAACAGAAACCAGAGATCAGAGGTCACCTCTAGACAATGATGAGTTGGAAGCTAGCTGTTTCTCTCTGTTACTTTTTACCAAAAAATAAAATTTCTACTGTGTTGATAAGGAAGGCACTGTATGATCTCTGGAGTTGACGAACAGTAAAAGTTTTCACTGTGTTAGTCAAGAAACATCCAAAGATCCAAAACCATTTTCAAATGCTCAACTTTGTAGGTTCATAGATGCACAATTTCCACAGCCTTAAATCAGGCTCTGTTGACACAATGCCAAAGTGATGGGCTGCACAATGAGAGTTTCAATCAGCTAGTCGTTCGGTGCGCTGAGGACCAAACAAATGGTGAGGCCGATGGTGTTCACTGAATTTGTTCTGGAATTGTACACACACAGTTTCAAGGCCATTCTGACAACTATGCAACGGGCGTGTTTGTAATGTCTCTGAAATTTGAGGGTCTTTTTGTGCTGAGTTGATCTTTAGAATTTGCATAAATCTTGTTTCTCTTTGTCACCAATGGAAATGTTTCACCCCAGTTGTTGTACTTGCTTCCCTCCAGTATTCCCCTGAATTTCTGGCCTTGGCTGAGTTAGCACTGACCTTTCCCACTACTTTCCCCAGTTTAATTTGTTGAGCTCAAGTTTGTAGTAATGTCTTTGGAACCATTTCGTGTCAGCAGATGCTCTAGAGATGATAGAATCTGTTTCTGCTTCAGGTGTGGGTAGGAGGGGAGGCTTCCTTTATCACCCTAATCCAGATAACTGCATTCTTTGTAAAGCTTAGGGCTAAATGGGCAGCTTTTATTAAAGGCTGCTGCTGTTTTAGGCTTCACTGGGAATGGAGAGGATAACGTTAGAGCATTTGTTTAAAAAAAAAAAGTCATCATCTCTTTTGATAGGGAAATTGAGAGATGTTATATATGTGGCTGCTTCACAGCCGTAGAGCAAGTGGGTGATTTTATATTCTGGATCTTTCTTAGCCCTTCGTTAGTCACAAACATTGACTGTGTAGTCTTCTGTCAGTCATAAACTCATTGACCTTCATCAGAATTATAAGGTGATATATTAGTATATTATTTGATCCAGCTTCCCCATGTGTCAGATAGCAATAGGATGATTACGTCCAGTAAATTCTTATAATAGCAGATTTTTTCCCCAAAATCTAGACAACAGTACAAACTGGGGAATCTGCAAGTTCATGATGTCTGCATCTTCCTGCCGCTTTGAATGGCTTGACCTCCTGATGCTCTCAGAAAACAAATGGAGTATCAAGTAGGAAGCATGCACTGTTTTCAGAAAAACAAATGAATATTGCCCTCATTTGAATTCTGTCACTCAACATGAACTCTAGAACCTGACCTGATGCCCACAGACCACCTCCTTAGTTTTTCTTAGATTTCATTCATTTTAAAAAAGTCTCATTCTTGGATAGCTTCATTTTTAGAAAAGATTTAAACTTTTCTCATTCAATGCTATGTCGTCTCACCATACAGATGCTAATTTTTGACAGCTCTTATATACCAATTTTTAAAACGTAATAGTGATTTTCAACATATGGTGCAAGTCTTGCTGGTGTGTGTTTAATGTGGTGACACTTGCCAAAACTGCTTGGCAAAACATGTCAAATAGGATGCTTGAGTCAGAACGCTAGTGGAAATGTCTCTAAACAGCAGTATGTATCATTATGATATATTTTTGTAAACATAGTGATGGCTTCTTTCAGTCATGTAAGTACTGGATAAAAATAACCACTTCACTTGAAATAATGTGGAAAATGCCACCCAGTTGAGGGCCCTCTGCAGTTACTTGAATTATCAGCCAGTGGTTAGACAGTGGAGAATTAATGCTGGACAACATGAAGTGCACAAGTAATAACTCACCAGTACTTGCCTCCTAATTAAAATTCAAAACTATAAAGAGTATATTTACCTGTTAGAGACCACTTTCACCCTCCATGGTGTATTCAGTTGCAGAGAACACTCAGAGGAAGGACTTCAGTCATCTTAACGACCAGCTCGGTCAGTATGGCTTATTGATAGCACTGAATTACCATATCTTTGTGGTAAAAGCACCAGATTAAATTTCCTCATGACTGTCCAAAACTGGCTAATAGAAGCACTAGGCTTTCACTGAATCACAGTTCCCCAAATTACAATAAAAAATACATCTGCTAAGATGACTTACTCAAAAGCATGTTCATTGTCAGAATTGGCCCAGTACAAGTAGCCTGATGGGTCTTGCCTGCATTGGAAACTCTTCAGACCCATTCAGAACCACTGACAAAGCTATAGCTTATAGTTCAGAGTCCTGTGTGCAGGTGTTTTGCTAAGCACTTTATGCCTCCTCTCATTTTAATCCTCACAAGCACTCCCTAGGCTGTTATTGTTATCCCATTTTATTGAGCTTATTATTACTCAGCTAGTAAGGGGAAATCTTTGGGTTTAGAAAGTGGAATGACTCGTTCAGTTTTCTCCAATAGTTCCAGTTTTCTCCCGTTCTCAAAACCCATCAACACTTTGGGGATAGATTTGTTGTTTAATCGAAGTAGTGAATAAAATGACTAATTTGTTCACATTTCCATCATAGGGTTCCCAGTACAAAAATGCAGGGATATAAAAGCAAAACTTTGAACTCAGTGAAGTGATGTTCTTTGGGAACAGATAGATGTTAGACGTGGCACTGGACATCATTAGCCAGCATTCATTCACTTTTCACATCAGTTGTATTCGTAGCCTTAGATTTGATGAGTCTGGTTTGGAAGAGAGGGTTCTAACCATGATGTCACTGTGAGAATTGTCGTGAAGGTTTTGTAGGAAAATACAGTAATCTGTTGATCCTTTCCTTTAGTTGTGGCTTTAACACCTCTGGCTGTGTTTGAAGTTTCAAGAGGTTGCCTCGGCCATCAGTGCCTGGCTTTGTTTCTAGGGAACAGGGCATGCCAGGCCGTGAGAGGGGTCCTGAAACCCTGAAGGTCGCTGCTCCAGTCCGACCCTGCCCCATGTAGGCATTGCCTCTGTGTGTGTCTCCTCCCTGGAACTCGTGTAGCAGCCTGACACTGGGGCCAACTTGCCTTTACTCTATTTTCTATGAAGAACACATGTGCAGAAACTGTGACAAATCCATTGATCCTGATATTTTTATTGTTGAAGTCTTGTTGATTCTTTATTAATAATTTCTATTTGATTGTACTGTGTAGAGTTAATACCCACTAGAGATATGTTAATAAAGCTATAAATGCATAGTGTAATACAGGATAGCAAGATTTTTTGTGAACAATTTATATAGAAGAGTAAGTTGTTTTTTAAGTGTTAGGCACATTTCTTTTAGGAACTTAAAATGTTATAAGAGTTTTTTAAACATTCAATATTTTTAATTATAAGCAACATTTGTTACTAGAGCCAGTTATTTCAGGTGTTCTAACTGGAGTATTGATTTTATTACTTCATATACCTCTAGAATGCCACTTGTTCTGTTGGAGATAAAGTTGCACAATAAATGTCAAGTTTATGTTAAGTGTTTTAACTTGCTTTTTGCATCTTTCTCAAATTTATTCAAGACGCTTTTCTGGGTGTTTTTTTCTTTAACAAAACTTTTTTTTTTGCCTTGACACTAGGGCTTTTCTGCATGACTCAGAATGCCAAGAAAATGTTACATGCTTAATAGCCATATAAAAGATAGTTATGTCCAGGAACTGACCAGAACTCATCCAAAAAATCCATTTGATCTAGTGAATGAAGGGGACAACCAGTGATGAAGTGAAAGTGACATGTGATCCAAAATTTCTGCCCAGCATTTTCTGCAGTCACACTTTAAACATACATGCTTCTGTAGTTCCATTGCTCCGCGAGAGGACGAATGCTACAGTTTCTTCTCTTGACCCTTTAACAGTGAAAAGATGTTGATTGGTTATGAACAGTGACCTCATTACAAAAGCAAAGTAGCTATGGCTAAAGAAGATGGCATGGTGGCTTCCCACTAGT EMBV3_37907 GGGGAGGGCTCTGGCACTGATATTTTTTAAAGCTCCCAAGATGACTACAAACTGCAGCCC Gene BVV0102_363995 + 0 NULL GK000021.2:43004052-43042578 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00124201 1 XLOC_075752 NonCoding TCONS_00124201 XLOC_075752 NonCoding NonCoding - 21:43036782-43037242 - TSS92960 460 0.215217391304348 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.99435876812402e-05 0.000984012073073418 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.163068861106331 0.173322411170012 NA NA CTTCACTTTACTCTTTGCAATAGCTTAGAAAAGAATAAAAACTTCAAGACTTATTTTACAGCCATATTTCTGAGTTCTTCTCATCTTACTGCAACAACTGGATAACACACACTGATAAGTGGAAAATCTACCTTATTATTTTTCTTTTTACTCGTAGAAAGGGAACATTCAGTGATATGACGCAATTGAAATCATTTCCTCTTTAGGAATTTTGCTCTAATTAAAAAGGAGCAGCTCAACTAAAATCCTCACATCCTCTTGAGCAGGGAATAAATGAATCACAACCTCAGTATCAGTGACCAGCTTTACCTGATGTGAAAATGGTGAACTTCAGCTAAGGAACAGAGATTATAAACCTGGGCTGCAGTTTGTAGTCATCTTGGGAGCTTTAAAAAATATCAGTGCCAGAGCCCTCCCCTGAAGGTTCTGATTTAATTGTTCTCCATTTCTCTGTCTCTCT TCONS_00119464 TCONS_00119465 . 3' 2423 TCONS_00119464 TCONS_00119465 . 3' 2882 EMBV3_04220 TGCATTTGTGAGACAAGGCTGGGCAGTGTTGGTGATACCGGGGGTTAACTCTGCTTTATC Gene BVT0102_286810 - 1 EMBV3_31692 GK000023.2:864356-1354730 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00575 CAAAGGAATGGAGCAGTTTCCTCACTTGGCCTTCTGGCAGGATCTTGGAAACCTGGTAGC Gene GeneID:281291|M6PR:NM_175779:7_cdna UTR3_Alt 2 NULL GeneID:281291 5 GENE M6PR CD-MPR CDMPR MGC140730 mannose-6-phosphate receptor (cation dependent) EMBV3_06052 GTGAGGTCTGTTAGGGGTGCATCCTGCAGCTTAATTGGCTTAAAATGTCCTCTCCTTTGG Gene BVV0101_036983 + 0 NULL GK000001.2:93140434-93625501 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168737 TCONS_00168746 TCONS_00098204 TCONS_00168741 TCONS_00168740 TCONS_00168751 TCONS_00168755 TCONS_00202657 TCONS_00119310 TCONS_00168747 TCONS_00168739 TCONS_00119313 TCONS_00168748 TCONS_00164321 TCONS_00204640 TCONS_00202656 TCONS_00168753 TCONS_00119315 TCONS_00168754 TCONS_00119314 TCONS_00168745 TCONS_00168742 TCONS_00119312 TCONS_00168738 TCONS_00119311 6 XLOC_103174 XLOC_058450 XLOC_124016 XLOC_072869 XLOC_100202 XLOC_124496 Coding TCONS_00204640 XLOC_124496 Coding Coding - 6:20413972-20418826 - TSS153051 3148 2 TCONS_00204640_9 130 0.306543837357052 2 0.351741191015866 0.148505195416181 0.126002462205398 0.136800279474487 0.0993590771190472 0.130133882119036 0.0480536066423031 0.0760458575472801 0.114515044727616 0.17750770940019 0.0218214825413354 0.00281132127368957 0.00379017950592231 0.0240202229194392 0.0529367491886849 0.0398083188833594 0.0009935021033482 0.00224579179507347 0.0010368162934631 0.0998810081179903 0.0877740241495524 0.0433217597661745 0.000903736109012594 0.000777381793498529 0.00127469500945967 0.123708491525303 0.0914770614046789 0.0894469428108921 0.00130516825875574 0.00102207187226357 0.00196589778498949 XM_005203639.1 TPM3 PREDICTED: Bos taurus tropomyosin 3 (TPM3), transcript variant X14, 0.0 2928 90.58 0.64707750952986 NM_153649.3 TPM3 Homo sapiens tropomyosin 3 (TPM3), transcript variant 2, mRNA. 0.0 2233 83.14 0.64707750952986 TCONS_00204640_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-35 131 59.81 0.971698113207547 0 noncoding 1 1 1 1 -0.859087928639218 0.00683989089552069 -1.06405010848439 3.52673399974048e-05 ACTCAAAAAATGGGCCAAAGAACTAAATAGACATTTCTCCAAAGAAGACATACAGATGGCTAACAAACACATGAAAAGATGCTCAACATCACTCATTATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATTTCACGCCAGTCAGAATGGCTGTGATCCAAAAGTCTACAAGCAATAAATGCTAGAGAGGATGTGGAGAAAAGGGAACTCTCTTACACTGTTGGTGGGAATGCAAACTAGTACAGCCACTATGGAGAACAGTGTGGAGATTCCTTAAAAACCTGGAAATAGAAATGCCATACAACCCAGCAATCCCACTGCTGGGCATACACACTGAGGAAACCAGAACTGAAACAGACACGTGTACCCCAGTGTTCATCACAGCACTGTTTATAATAGCCAGGACATGGAAACAACCTAGATGTCCATCAGCAGATGAATGGATAAGAAAGCTGTGGTACATATATACAATGCAATATTACTCAGCCATTAAAAAGAATACATTTGAATCAGTTCTAATGAGGTGGATGAAACTGGAGCCTATTATACAGAGTGAAGTAAGCCAGAAAGAAAAACACCAATACAGTATACTAATGCATAGATATGGAATTTAGAAAGATGGTAATGATAACCCTGTATGGGAGACAGCAAAAGACACACAGATGTATAGAACAGTCTTTTGGACTCTGTGGTGGAGGTGGGGGATGTTTTGGGAGAATGGCATTGAAACATGTATAATATAAGAAACGAATTGCCAGTCCAGGTTCGATTCAGGATACAGGAAGCTTGAGGCTGGTGCACTGGGATGACCCAGAGGGATGGTACCGGGACGGAGGTGGGAGGGGGGTTTCAGGATTGGGAACATGTGCACACCGTGGCGGATTCATGTTGATGTATGGCAAAACCAATACAATATTGTAATTAGCCTCTAATTAAGATAAATAAATTAAAAAAAAATAAAGAGATTGTCATATTGGATTTATTTATTTTGGAGGGACTGGTTATTTCAAAAAGACATTTATCAATTTTCAGTATCAAAACAGTTACACTATTGGTTTTTTTTCTCCCAATTGGTCCCCAAAGAGACCACACCAAAGGAGAGGACATTTTAAGCCAATTAAGCTGCAGGATGCACCCCTAACAGACCTCACTGAAACCTCATCAAAAAAGGGGGATTGGGTAGGGAAAGAAACTTTAAAAGATCAGCACACTGCTAGCCCACAGACTGTAGAGAGCTCTCACAGGCAGAGGGGTGACCAGTTTGCCTCAACCCCAAAGAAGCAAAGTTCCAAAATATAAAAATTTACAAGTTTTGTACATACGCTTTTCAAGATTTCTCCAGCACTAACCAATACAAAGCACAGTGAGATGGCACTTTTAGAGACAGCAGCTTCAGACCCAGAAAAGGGTGATGAGATGAGTTTCATATGGCTAAATCAGTGGCAAAACATAATTTTCTTTCCTTTCTTTCAAGGAGGCAGGAGAGCAAATAAGTGGTCACTTCAATATAAGGGGCACATGATCCATTAGTAGTTGGGAACAGGGTAGAGCTGGGACAAGGATTTGGTCTCAGAGGTTTTACCATCTTAATTGTTTGGTCACTTCTGATGAAAAAAGAAAAAAAAAAAGTTGTCCAAAGATACCGTAAAGCTGAAAACCTGAACAGCACTTTTTTTTGGCTAACTCCTTCTGGAATCATCTTTCTGCTTTGGCAGGTACTTTTTACAGGGCAATGAGGTTTCCCCAAATGGAGCCTTTCTCTGGGCTGCTAGGCTCTCAGTAAGGCAGGCCCAAACCTTTTCCCTTTCTCTCTGGAGAAGGCAATTAAGCTGAAATGTTACCTTCCAAAAGTGAGAAAGGGATTAGACTGCTGCTTCAGTTCTACGGAATTATCTGGAATGTTTTTTTACAAATGGTTGTAACATCAAGAACAAAAAAGGTAATTACAAAATGTGTACATCACAACATGCTTTTAAAGACACTTTGCATTGTGCTCACATTCCCTTAAACGTTGTTCCCAAAGGTGCTCAGCCTCTAGCCCACCTGGAATCTCTGGGGAGAAGCAGAGACTGGCGAAAAGGACACAGGAGTAGGGGGGTGGTCAGCTTCGGGCAGGCTGGCCCCAGTGGAGTCGGAGTCGGGGTGAGAGGGAGGAGCAGCGGCAGGGCGGGGCTGGGGTGCTCTACATTTTATTCAGGTCAAGCAGAGTCTGGTTCAGCATCCTTTGTGTACAGAGGTCCTCCTCTTTGGTGCATTTCAGTTTATCTTCCAAATCATCAATTGTCTTTTCCAGCTTGGCTACTGATCTCTCAGCAAACTCAGCACGAGTCTCTGCCTCCTTGAGTTTTTCGGTAAGAATCTTTATCTCTTCCTCATATTTGTCTTCCTTTTGAGAGTACTTTTCTTCAGCAGCACTCAGACACTTCAGGTGCTGGTCCATCAGTCTGATTTGCTCACCCATCTTTCGGCAACGGGACTGTGCCAGCTCCGCTCGCTCCTCTGTGCGCTCCAAGTCTCCCTCAATAATCACCAACTTGCGAGCCACCTCTTCATACTTCCTGTGTGCCTCTTCTGCAATGTGCTTAGCTTCTTTGAGTTGGATTTCCTGGAGTTCCATTTTTTCTTCATCTTTTAAGGCTTGGTTTTCAATAACCTTCATAACTCTCTCGCTCTCATCAGCAGCTTTCTCAGCTTCCTCCAGCTTTTGCAGCGCAGTGGCCAGGCGCTCTTGAGCTCGGTTCAGCTCCTCTTCAACCAGCTGGATCCTACGGTTTAAGGAGACCACTTCAGCCTCAGCCTGTTCTCGGGCCCATCTTTCTCCATCCACTTTCTGCTGGAGGCGCTTGGCCCTCTCCTCTGCATCATCGGCCTGCTGCTGCAGAACCTGGATCTTGCACTTCATTGCCTCGGTGACAGCGATCGCGGCCATGACAGTGGTCCCGGCCATGGTCCCCACCCAGCTCCTGCTTGCCTTCGGGTTCCTGCCTCCTCCGCTCGGCGCTCGGCGTTGCAGCCGCTTCTCACCCAGCTTGGTTCCTGCAGGGTTGAACTTGTGGCCCACACTAGGCGAAGAGCATGCACAGTCAAAGCTGACAGTAGGAAGCTTGGGATACTTAGGAATGGTGGGTTGCAGTTTATGGGGT TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 35715 TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 30976 EMBV3_04142 GCACAGTCCATCCAAAATTGTCTGGCAATACAGCATCTTTTCCTTTCACTATTACAAGCC Gene GeneID:781106|NEGR1:XM_002686317:80_cdna UTR3_Alt 2 NULL GeneID:781106 3 GENE NEGR1 MGC157347 neuronal growth regulator 1 EMBV3_27780 TGCTTGATCTTTGCCAGATACAGGATTTTCCACCCCAGAGGCCTTCGGTGTCAGCTCCAA Gene GeneID:508176|TMEM82:XM_002694141:520_cdna Constitutive 0 NULL GeneID:508176 16 GENE TMEM82 NULL transmembrane protein 82 EMBV3_23932 AGGTGGCGTACAAGCCCACAATCTAGCAGGGCAAAGATCCCTTCTACACAGGAGAAACAA Gene GeneID:785478|LOC785478:XM_002697268:21_cdna Constitutive 0 NULL GeneID:785478 23 GENE LOC785478 NULL similar to hCG2042411 EMBV3_41532 CATTGGAGGGGACACAGTTCAGCCCTTAGCCAACCCAGGGACAGACCCATGTAAAGAAAT Gene BVV0102_327464 + 1 EMBV3_11301 GK000018.2:40467459-40563246 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09646 GATTTAGGAGATCCAAACCCGAGTCACCCACTTGGCCCTTCTCACTCCACCCCATGTTTC Gene BVV0102_073189 + 0 NULL GK000008.2:10351205-10456053 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37816 TGTGAGTTCCTCACCTGCATCCCCTTCACTGACAAGTTCTGTGAGAAGTACGAGCTGGAT Gene GeneID:529167|RHBDF1:NM_001105400:14_cdna Constitutive 0 NULL GeneID:529167 25 GENE RHBDF1 NULL rhomboid 5 homolog 1 (Drosophila) EMBV3_03703 TTGAGTGAAGGCCTCTCTAGGACAACCAAGGCTCCTCCGCATCCCAGTGAGCAGGTAGAA Variant GeneID:539447|C11H9ORF9:NM_001101193:178_cdna 106^298 1 EMBV3_35714 GeneID:539447 11 GENE C11H9ORF9 NULL chromosome 9 open reading frame 9 ortholog EMBV3_27295 TACTCCTGATGGTAAATACGTGGTCGTGGCCCAGCTGAATCTGAGCCGGCTCTTAATCCT Gene GeneID:506625|NHLRC3:XM_002691796:426_cdna Constitutive 0 NULL GeneID:506625 12 GENE NHLRC3 NULL NHL repeat containing 3 EMBV3_00995 ACATTTGTAAGCAGTAGCCCTGGAGACACTGAGGATTCAAAAGAGGAACTAGGCGAGGGG Gene BVV0102_053433 + 0 NULL GK000019.2:50635835-50647428 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30948 AGGATGCAAAGTACAAAGCCCTCAGGATTGAGCCTGGGCAAGAGATGACCATCCTGTCTG Gene GeneID:100337122|LOC100337122:XM_002689307:174_cdna Constitutive 0 NULL GeneID:100337122 7 GENE LOC100337122 NULL caudal type homeobox 1-like EMBV3_00899 ACTAGGTTGCGTCCTCCGCCATGGGGCTTGTTGGGGTCTGTATGCTAGGTGCTGAGATTT Gene GeneID:508394|CASQ1:NM_001077877:251_cdna Constitutive 0 NULL GeneID:508394 3 GENE CASQ1 NULL calsequestrin 1 (fast-twitch, skeletal muscle) EMBV3_11054 AGCCCGGCCAAGGTCAAGGAAGGAGAAAAATAAGCTGGCTTCCAGGGCTTGTCGGTTAAA Gene GeneID:513587|LOC513587:XM_002696253:19_cdna UTR3_Alt 2 NULL GeneID:513587 20 GENE LOC513587 NULL similar to UPF0474 protein C5orf41 EMBV3_16362 CAACAGCGGAAGCTTCCCACCGTGTTTAAGGAGAATATGAAAGTATTACTCAGGCTTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26019 AGCGAGGAAGAGCTGGAGCACAGCCAGGACACAGACGTGGAGGATGGGGCCTTGCAGTAA Gene GeneID:504640|RALY:NM_001014847:853_cdna Constitutive 1 NULL GeneID:504640 13 GENE RALY NULL RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) EMBV3_29424 CCCTTGGACAGCAGTGTGGAGTTTATGCGGATGAAGATCTTTGACAAAAATAAAGATGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20383 AACAGACGCTCAGCAGATATGTGGAGTTTTGCAGTGCTTCTATGGGAACTGGTGACACGG Gene GeneID:540207|ILK:NM_001034693:46_cdna Constitutive 0 NULL GeneID:540207 15 GENE ILK MGC129022 integrin-linked kinase EMBV3_38567 CCGGGAGGCTGCCTATGGCTTCTTCCTGCTCTGGGCTTGTGCTGTTGGCCTCTACATGGG Variant GeneID:508953|TMEM160:NM_001046019:157_cdna 325^453 1 EMBV3_04493 GeneID:508953 18 GENE TMEM160 MGC140247 transmembrane protein 160 EMBV3_26890 CGGTGCGGGACCGAGAGCTGGACCTGCGGGGGTGATCTGGACCCTCTGGCATCTCTCAAG Variant GeneID:512584|SNRPA1:NM_001098948:67_cdna 121^347 2 EMBV3_27884 GeneID:512584 21 GENE SNRPA1 MGC165803 small nuclear ribonucleoprotein polypeptide A' EMBV3_28351 CCCGAAGTGAGAGGGGCATGTTCACAATGGAGAGACACTTGGAGTCAAGCAAAAGCAATG Gene GeneID:507297|HEATR5A:XM_002696697:76_cdna UTR3_Alt 2 NULL GeneID:507297 21 GENE HEATR5A NULL HEAT repeat containing 5A EMBV3_22377 AAAAAGAGAAAGTTAAAGTACCAAATGTGGATGTGCCTTGAAGTAGATATCAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_40888 GTCATGGTAGAATCAGCCCAGACCACATGGATCTTCACTCTGCCCTTCTGTGGAACAGGA Gene GeneID:788428|LOC788428:XM_002687502:396_cdna Constitutive 0 NULL GeneID:788428 5 GENE LOC788428 NULL similar to olfactory receptor 247 EMBV3_14224 ATGGGAGAGCCGTGTGAAGAAGAGGAGGCTGTGTGGAGACAGAGGCGGGGATGACATGTT Gene BVT0102_419682 + 1 EMBV3_28970 GK000024.2:54177823-54186471 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12093 AGCCGACACCAGATTTCCCTGTGGATTGACCTTCCAGTCAAGGAGCGGTAACAAGCTGAA Gene GeneID:788329|THRB:XM_002698755:16_cdna Constitutive 0 NULL GeneID:788329 27 GENE THRB TRbeta1 thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian) EMBV3_09006 TCAGTCATGGGGTTGCTGGTGACATCTGCCGTTTTCCACCTCCCCTTCTGTAGCTCTAAT Gene GeneID:510087|LOC510087:XM_002688596:334_cdna Constitutive 0 NULL GeneID:510087 7 GENE LOC510087 NULL similar to LOC508140 EMBV3_41123 GGAGGGGCAACTGTAGGGTGGGGGGAGGTAAAGTTTGCTAAAGGGTCTTTGATCATGTCT Gene BVT0102_234766 + 0 NULL GK000001.2:71230158-71259634 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003889 TCONS_00003893 TCONS_00003891 TCONS_00003890 TCONS_00003888 TCONS_00003895 TCONS_00003894 TCONS_00003892 1 XLOC_000932 Coding TCONS_00003891 XLOC_000932 Coding Coding TFRC 1:71255166-71287252 j TSS1970 6959 1 TCONS_00003891_5 654 0.318005460554677 20 0.783730715287517 7.13616987184944e-11 0.000113309581355387 1.23327133839864e-12 0.000240955515019389 6.42959031588307e-05 1.5486904785614e-05 0.000172093223324694 0.000177073402383957 0.000183252952085251 0.00107204440789623 0.000131178960797503 0.000111411514552349 1.03652840037822e-09 9.7764937082049e-07 3.92351338743782e-08 0.00625867110810551 0.0054152709322243 0.0137760649779404 0.000489511146058078 1.43949999137803e-09 3.52284278030153e-07 0.00856793058588513 0.0052910439336981 0.00132402415272535 3.07836176386947e-09 9.51628570452742e-10 3.46681557952471e-12 0.00399813366348543 0.00144746743761711 0.00367202891765267 NM_001206577.1 TFRC Bos taurus transferrin receptor (p90, CD71) (TFRC), mRNA. 0.0 3355 99.79 0.268573070843512 NM_003234.2 TFRC Homo sapiens transferrin receptor (TFRC), transcript variant 1, 0.0 1934 83.59 0.262394022129616 TCONS_00003891_5 sp|P02786|TFR1_HUMAN TFR1_HUMAN Transferrin receptor protein 1; 0.0 996 75.89 0.943425076452599 3 coding 1 1 1 1 0.233599617991238 0.312974708609784 -0.221593856814872 0.154846212452125 GGGTGTCGGCAAAGACTGGTGGCGGGCCGGGAAGCAGCGGACGGGGAGGTCCTTCTGGCTCTTCTGTGTGGCAGCTCAGAATGATGGATCAAGCCAGATCAGCATTCTCTAACTTGTTTGGTGGAGAACCATTGTCATATACCAGGTTTAGTCTGGCTCGGCAAGTAGATGGTGATAACAGTCATGTGGAGATGAAATTAGCTGCAGATGAAGAAGAAAATGTTGACAGTAACATGAGGGGCAACCAAACCAGTATCGCAAAACCGAAAAGGTTAAATGGATATGTCTGCTACGGGATCATTGCTGTAATCGTCTTTTTCTTGATTGGTAAGAACAGCCATTCAAAACTTTAAAAATTCCTTGTTGTCAACTCTAGGAAGTTTGTTCATCCAGCTCAGCAAACATTTATGTAGTGCATTGTGCAAGATACCAGGAATACAGTGATGCCTAAGATTTTACACCTGCCTTTGAGGTTAGCCTGGTGGGAGAAGAGCAACACAGNNTTCGTGCCCAGAGGAGACAGAACTTTCGAATCAGAAGAGCAACTCCCTGGAGTACCTCGCATATTCTGGGCAGACCTCAAATCAACGTTGTCAGGAAAACTGGATGCCGTAGACTTTGCCAGGGCCATCAAGATGCTGAATGAAAATTCTTATGTCCCACGTGAAGCTGGATCTGAAAAAGATACCAGTTTGGCTTTTTTCATTGAAAATCAATTACAGGACTGTAAACTCGGCAAAGTCTGGCATGATGAACATTTTATTAAGATTCAGGTCAAAGGCAGTTCTCAAAACTCGGTGTCTATAGTGAGTACAAGCGGTAACGGCAGTCAGGCATACCCAGTGGAGAGTCCTGAGGGTTACGTGGCATATAGTAAGGCTGCGACCGTTACTGGCAAACTGGTCCATGCTAATTTTGGCACTAAACAAGACTTTGAGGATTTAAATATGCCTGTAAATGGATCTTTAGTGATTGTAAGAGCTGGAAAAATCAGTTTTGCTGAAAAGGTGGCAAATGCTGAAAGTTTAAATGCAATTGGTGTCTTGATATACATGGACTACAGTAAATATCCCATTGTTAATGCAAATCTTCCAGTTTTTGGACATGCTCATCTGGGAACAGGTGACCCTTACACACCTGGATTCCCTTCTTTTAATCACACTCAATTTCCACCATCTCAGTCATCAGGATTGCCCAACATACCTGTCCAAACAATTACCAGAGCCGGTGCAGAAAAGCTATTTCAAAATATGGAAGGAGACTGTCCTCGTATTTGGGGAACAGACTCTTCATGTAAGCTGGTATCCTCACAGGATAAGAATGTGAAACTTAGCGTGAACAATGTGCTGAAGGAGATAAGAATTCTTAACGTCTTTGGAGTTATTAAGGGCTTTGAAGAACCAGATCGCTATGTTATAGTAGGGGCCCAGAGGGATGCCTGGGGTCCTGGAGCTGCAAAGTCCAGTGTAGGAACAAGTCTGCTATTGACACTTGCCCGGATACTTTCCGATATGGTCTTAAAAGGTCAGTTTAAACCCAGCAGAAGCATTGTCTTTGCCAGCTGGAGTGGTGGAGACTTTGGAGCCGTTGGTGCCACTGAATGGCTAGAGGGATACCTTTCCTCATTGCATTTAAAGGCTTTCACTTACATTAATCTGGATAAAGCTGTTGTTGGTACTACCAATTTCAAAGTTTCTGCCAGCCCACTGTTGTATTCACTTATTGAGAAAATCATGAAAGATGTGAAGCATCCACTTAATGGGCTGTCTCTGTATCGGGACAGCAACTGGATCAGCAAAGTGCAAAAACTTTCTTTGGATAATGCTGCTTTCCCTTTCCTTGCATATTCTGGAATCCCAGCGGTCTCTTTCTGTTTTTGTGAGGACACAGATTACCCTTATTTAGGCACTCCCATGGACACCTATGAGACACTGAACAGAGAAGTTCCTCAGTTGAACAGAGTGGCACGTGCAGCAGCAGAAGTGGCCGGTCAGCTTGTGATTAAACTTACCCATGGGGTTGAGCTGAACCTGAACTACGAGATGTATAATGACGAAATACTTCGGTTTGTGAAGGAAATGAACCTATTCAGAGCAGACATAAGGGATATGGGTCTGAATATGCAGTGGCTGTATTCTGCTCGTGGAGACTTCTTCCGTGCTACGTCTAGACTAACTACGGATTATAAGAATGCTGAGAAAACAGACAGATCTGTGATGAGGGAAATCAATGACCGTATCATGAAAGTGGAATATCACCTCCTCTCACCCTATGTATCTCCAAGAGAGTTTCCTTTCCGACACATCTTCTGGGGCTCTGGCTCTCACACTCTGTCAGCTTTACTGGAGCACTTGAAGCTGCTGAAGGTGGAAGGTGGTGGCTTAGAGTGGTCTTCCATCTTCATCTGATGCTAGACAGACACCAGACTGTAAGGCTTTACTCTCCACATGGGGTCTCTGCCTTCTGTAAGGATTTAGCTGGTTTCTACCTCTGAAAGTGGAACAGTTCACTTTCAGAAGAGATGGGACATGTTTTCTTGCCATTGAGGTCTGAAATAGAAGAACTTCAGCTGCATAAAGTGAGGTTCACAGGAGTAAGGCCTTAATGTGGCAACCTCAAGATTGTCTATGAAAAGAGGAGACCAGAAAGCCAAAGACCTAGTATATTTTCTTTTCCTCTATCTCTTGTCCCATAAACCTTTGTTAGTTTTTTGTTTTCACTTATTCCAAGGTATTTTGAAAGAGAACCAGGTTTTAGGTGTTTAATTTCAAACTCAGTTTGTCAGACTTTAGAGAACACAGTGCCAAATTTTGGCCAAAGTGTTAATTTTTTGGAAAAGCTTCCTGTCATTTTGGCACTGAGATATTTATTGTTTATTTATCAGTGACAGAGTTCACTATAAATGGTGGTTTGTTTTTTTTTAATAGAAGATAATTATCGGAAGCAGTGCCTTCCATAATTATGACAGTTATACTGTCGTTTTGGTTTTTTTTAAATAAAAGCAGCATCTGCTAATAAAACCCAACAGATACTGGAAGTTTTGCACTTGTGGTCAACACTTAAGGGTGTTAGAAAACAACCACAAGCCAAATAAAATTATAAAGCTCAGTCTTGAGAATTAAACTTAATTAGTGGTTGCTAATCAAGTTAAACTTCTATTTAGCTAACCAGATAAAAATGGCAGTTCTTCTAAATGCAGTGAATTGTGACCAAGTTATAAATTAATGTCACTTAAAAGCTGTGATTGTATTCATACATGCAAAATTTTACAGTTCAATTTATCCAAGATGTAACTTCAATTTGAATTTTGCAAAATTTCCAGTACCTTTGTCACAAACCTAACTCACATTATCGGGAGCAGTGTCTTCCATAATGTATAAAGAACATGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTCCATATGTTACACTAAGGGTGTACGTAATTATCGGGAACAGTGTTTCCCATAATTTTCTTCATGCAATGACATCTGCAAAGCTTGAAGATCGTTAGTATCTAACATGTATTCCCAGCTCCCTATAATTCTCTATCTTTTAGTTTTAGTTGCAGAAACATTTCGTGGTCATTAAGCATTTGGTGGATAACTTCAACCACTGTAAAATAAAATTACTTCCTTCAAGGTTCTTTGTTTTTAAACCTAATGCTGTGTTATTTGTGGTTTCTCCAGGTCTTCTGTTAGGCAGGATAGTGGCATACATTTATAATGTTTGCTGTTGTCAAGTAAATTTAACTTTATCCCCTTATTTGCATGTTATCTCCTATAAACTTAGTTCACACAAGTTTGAATCCAGAATTAACCTTTTAGCTTAAAGCAGTAGAAACTTGTACCAGAGTTTGGGGGGAGGGGCAACTGTAGGGTGGGGGGAGGTAAAGTTTGCTAAAGGGTCTTTGATCACGTCTCCCCAACCATTAGTATGTGTGGTGGTTATAAGTTAAATGTAGACATGAACAAGTAAGTTTGAGACCACATCAGTTAGGACTTTATTTTCTACTCACCCATTTTTATTATAAACCTGATAATCAGTTGTTTGTTCTAAGGCAGTTCAATACTGTCACCAAAAAAAAAGTTCATAGGGTAATCTTAAGATTCTTAAACTTAGTGTCATTTATGTAAATTAAAATAGATGTAGATGAATACAGCCTCACTGATTTGTTTGACTATTCAGTCTGTTTCAGTCTTCTAGTGTTTTATCTTGAACTGATACTTAGTGTAAGTGAAAAGGTCAGAGTTGGGATTCCTGGTTTGAGTATCATGCTTTGTCATTTTAATGAAAGTACAGTGACTTCAAGGCATTTTATGAATAACGGGTATACATTTTACAGCAGTAAATTTCTTCAGAAAATATTTCTGTAGTTAGGATTAAGTTATTTACAATCAAACAAGTCATTATGTGGTAAGGGGCTTAATATTCCTGAAGGAAATGGATATCTGACTAACGTCAACCAGCTGGTCAGATTTTTTCTGGTTTTAGATGTCACATGTATTTTGAAAGTAAAAGGATAAAATGAGTGAGCTTTGTCATGATTCACTATTCTAGAACTTGCATGACCTTTATTGTGTTTCCTCTGGAATGTTCTTGAAATTTTAGTTTACTAAAGATAGCATATTAGACTTGCCAACTTACTGCTCAGCTGTGTTTGTGAACAAGTGATATGCCCTTACATTGTATACAATCTGGTATGTGCAACAATGTGGAGATTCCTCAAATGATTTAATAAAATGCTTGAACACTGAGTTGTCATTGTTAATAGATTTCACTTAGGTTCCCAGTAAAACTGAGCGGAAAGTATAGTTCCCATATACTCCCTGCCTGCACACCACCCCCATCCCAGTTTCTTTGACCATCAATATCCTGAGAGTGCCCCACCCCCAAGTACATTTGTTACAATCAGTGACTCTATCTTGACACATCATTATCCTCCAAAGTCCATAGTTTACATTAAGATTCACTCTTGGTGGTTTACATTCTATGGGTTTGGACAAATGTATAATGATGTATTTACCGTTATAGTACAATACAGGATAATGTTGCTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCCGACTCTGTGCGACCCCGTAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTGCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTCAGTCATGTCTGACTCTTATCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCTCCCATGAGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCACTGCCTTCTCGGACAGGGTAATGTTACTGCCCTTAATATCCTGTTCTGCCTCTTCAGCTTCCCTTCCCAGTAACCTCTGGCAACCACTGATAATTTTTAGTGTTTCCATAGTTTTGCCTCTTCCAGAATGGCATGTATTGGGTTGGCCAAAAAGTTCATTCAGGTTTTTCCATTACATCTTAGGGAATCATACAGGTCATTCAATGTAACTTTTTCAGATTGGCTTATTTCAGTTAGTAATATGCATTTAAGTTTCCTCTATGTCTTTTCATAGATTGATAGCTTGTTTATTTTTAGTGCTGAATAATATTCCATTATCTGATGTAAGAGTTTATTTCTCCATTCACCTATCAAAGAACATCTTTGTTGCTTCTAAATTTTGGCAATTATGAATAAAGACGTGTACAGGTGTTTATGTGGACGTTGGGTTTTCAGTTCATTTGGGTAAATACCAAGGAATGCAATTGCTGGATCATATGTTAAGAGTTATCTTTTTGTAAGAAACTTCTAAAATGTCTTCCAAAGTTACTGTGCCATTTTGCATTCCCACTAGCAGAGAATGAGAGCTCCTGTTACGCCACATCCTAGGCAGCATTTGGTGGTGTCAAGTGTTTTGGATTTTGGCCATTCTAGTAGGTTTGTAGTGGTGTTTCATTTTAATTTGTATTTCCCTAATGACAAGATGTTGGGCATCTTTTCATGTTTTTATTTACCAAGTGTATATCTTCGGTGAAGTGTCTGTTCAGATCTTTTGCTCCTGATTTAAGCAGGTTGTTTATTCTCTTATTGTTGAGTTTTAAGATTTTTTTTCTTTTGGTGTATTTTAGATAACAGTCCTTTATTAGATATGAGTTTTACAAATATTTCCCCCCCAGTTTGTGGTTGTCTTTTTTATCTTTGCAGAGCAAAAGTTTTTAATTTTAATGACATCCAGCTTATCAATTATTTCTTTCATGTATCACCAAACCCATCTAGATTTTCCCCTATGTTATCTTCTAGGAGTTTTATAGTTTTCCATATAAAGGATTTTTGTAAAGAATATATGGTTTATTCATTTTTTTGCATGTGGATGCATGTGGATGTCCATTTGGTCATTGGTTTTCATTAAGAACACTCTAACAGGTCACATCATTTGCAAGTATTTTTTCCCATTCTGTAGGTTGTCTTTTTGTTTTAGATTAATTTTCAAATATATACAAACAACTCATACAAATCAAAATCAAACAAACAACCCAATCAAAAAAATGCACAGAAGATCTAAATAGACATTTCTCTGAATAAGACATACAGATGGCCAAAAGGCACATGAAATGATGGTCAACGTCGCTGATTATTAGAGAAATGCAAATCAAAACTACAATGCGGTATCACCTCACATCAGTCAGAATGGTCATCATCAAAAAGTCTACAAATAATAAATACTGGAGAGGGTATGAAGAAAAGGGAACCCTCTTAGACTGTTGGTGGGAATGTAAGTTGGTGCAGCCACTGTGGAGACTACTACCGAGGTTCTTTTAAAAACTAAAAACAGCTACCATATGATCCAGCAATTCCACTCCTGGTCATATATCCAGAAAAAAAATACAATTCAAAATGATATATGCACCCCAATGTTCATAGCCACACTA EMBV3_23263 CTTAACCCTGCAGTCTGTCTACACTGGTGGAGCCCTTGTGTGATGCAGATACTCTCTCTA Gene BVT0102_333044 + 0 NULL GK000018.2:44137174-44305868 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090322 1 XLOC_055103 NonCoding TCONS_00090322 XLOC_055103 NonCoding NonCoding - 18:44239810-44240100 - TSS67668 290 1 TCONS_00090322_1 87 1 0 0 0 0 0 0 0 0 0 0 0 0.000149981031670297 2.46598919859766e-05 0 0 1.69179340235617e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.178313095208483 0.282621640081878 0.0571022434334065 0.270028449089912 CTGGTGTCTTGGCTGAGATGAGCTTGGCATGGAGAAGGTGGTCAGTGATGGCGGGCAGAGTGCGCTTAACCCTGCAGTCTGTCTACACTGGTGGAGCCCTTGTGTGATGCAGATACTCTCTCTACACCCACTGAGCCAGTGCATGGTGCAGGCAGTCTGTCTACACTGGTTGAGTCAAGAGTGTGAGCCCTGGAATCTTCCATTTAGTCTGTGCCTGCCCCACTTTCAGTGGGGTCTTCGTACAAACTCTAAAACTCTCTCTGGCTTTCGGGGCTTCCCCGTGACCGAGC TCONS_00083317 . 3' 5641 TCONS_00083317 . 3' 5930 EMBV3_10598 GGCTCTCCGCACTTGCTCTGGTGTCTTCTGCCATATCACTGCATGTTTACTCATAACCTG Gene BVT0102_295166 - 1 EMBV3_36579 GK000007.2:17254007-17264356 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212126 TCONS_00212123 TCONS_00212124 1 XLOC_130092 Coding TCONS_00212126 XLOC_130092 Coding Coding LOC508834 7:17255213-17257196 j TSS159252 1669 2 TCONS_00212126_4 67 3 0.159434914228052 0 0 0 1.98974219922474e-05 0 0 0.000108518457283827 0.000931785225696081 0.000434527982142585 0.00011235598420945 0.000185741878041731 0.000250662209376603 0.00188548147567885 0.00463333057228895 0.0062092883402161 0.000587550662580817 0.000407843516938741 0.000902010615441717 0 3.01616318409527e-05 0 0.000902573517865196 0.000654110619903049 0.000328920088337343 1.24682338333121e-05 1.68852909473221e-05 0 5.61020299345922e-09 0.000229763794682066 0.000115273593419526 XM_005208736.1 LOC508834 PREDICTED: Bos taurus RNA-binding protein S1, serine-rich domain-like (LOC508834), transcript variant X1, mRNA. 0.0 2935 99.57 0.980826842420611 XR_242075.1 HNRNPA2B1 PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1 (HNRNPA2B1), transcript variant X2, misc_RNA. 0.0 886 71.44 0.929298981426004 TCONS_00212126_2 sp|P22626|ROA2_HUMAN ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1; 2e-20 83.6 65.00 0.983333333333333 0 noncoding TTGAGCCCCTTCTAAAGGCAAAGAAGATGGAAAAGTACTCAGGATTGATTCAAGGGCGGCAGGAGCTGAGAGGCCATGGCAGCATTGCCAGATCACCGTGGAAGTGCTCCTAGAGGAAATCTGATTGAAGCAACCCAGTCCAATGGAGAAAACCGAGAAATCAATTGCTTTGAAGAGGCAGAAGAGAGAAGCTGAACAAATTAATAAACTCTTTATTGGTGTTTTGAACTTTGAAACTGCAGAAGAAAGTCTGAGGAACTGTTACCAGCAGTGGGGAGAACTTAGAGCCTGTGTGGTCCTGAGGGATCCTTCCAGCCAAAGATGAAGACAGTGTGGTTTTGTCATCTTTTCTTCCCTGACCGAGGTGGATGAAATGTCCACCAGACCCCATTCCATTGATGGCAGAGTGCTTAAACCCAAGCTTGTGTCCCAAGAGCAGCATCTGGACAGCAGGGTGTCCTTTGGACACTGAAGAAACTGTTTGATGGTATTCAACAAGATACTAAGGAACATCATCTTAGAGATTACTTTGAGAAATATGGGAAAATGGTGCCATTGAGATCATTACTGATAGGCAGTCTGGCAAGAAAAGAGGCTTTGGGTTTGTGACTTTTGATGACCTTGATTCTGTGGACAAGACTGTGTTGCCGAAAAACTGTACCATCAATGGTCGTCATGTAAAAGTTGCAAAGGCTTTGTTCACATGGGAAATGCCACAAGTCCAGGGTTCTAGAAGTGGAGGAGGAGGCTGCTTTGGTTTGGGGGTTTATCCTGGTGGTGGTAGCGATTTGGGACTAGCATCAGGATGAGAAAGTAACTTCTGGGAAGGATCTGATACATATGGAAATGGTCCTAGATTTAGGGGTGCTAATCATGGGGCTGGAAAAGGGAGAGACAGAGGGTCTGTCTGGTGGTGAAAGTCCCATATCTGGCAACCATGATTGGGGCTGCAGAGGTGGTCATGGCAACAATGGAGGAGGAAATTGTAGAAGTGGAATTAACAATGACTTTGGAAATTATCAGCAGCAATTTAATTACAGTTGAGGAATGGAAACTTAGGTAGCAGGAACTTGAGGGCTCAATACAGTGAAGGAAACTCTGGTCCAGGAGGCAGTGGGGGATGTGGGGGTTGGGAGGGCAAAGCTGAAACTGAGCTGCTTCTTGTTTGCCCTGGGCTTCACTGTCTAGCGGAGGATGAGAGCCCAGAGTTAACTGGGCAGCTTCAGGTTATGAGTAAACATGCAGTGATATGGCAGAAGACACCAGAGCAAGTGCAGAGAGCCATTTGTGAATGAATTAAATTATTTAAGAACATTGCCTTCCTGCAGAGGAAAAACTGTATGGAAAATGCCTTTGAGGCAGTTTCTTAGCTTAATTGTTTTTTTCTAGTGATCTTTGTCAGAGTGTAGAAGCATCACTTCTTTGATAATGTTAAATTTTGTTTAACATTAAACATTTTGTTATATGTTTGTAAATTGTTAACATTTCTTTGTAAAATGTTACATTTTAAAAAATCTTTTGCAGATTTTTCTCAGTTTTTGAAAAGCTATTAGAAGTATGCTGTAATGAAACATATTAATAACATTATTCCTTAAATTTTAGCATGTAGAATTATTATATGAAGCAGTTGTACATTTATGATTTAATAAAATAATTCTAAAGGAAAAAA EMBV3_31542 CTGTCACCAGGGACACCCCTTCTGTATTGATCTTCTTTCTTCAACAGTGACTCAGGCTTG Gene BVT0101_009822 - 1 EMBV3_24067 GK000002.2:121712374-121714033 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106448 TCONS_00106450 TCONS_00106449 TCONS_00106447 TCONS_00106451 1 XLOC_062803 Coding TCONS_00106451 XLOC_062803 Coding Coding KIAA1522 2:121712725-121740860 = TSS78353 5384 1 TCONS_00106451_7 1077 7 0.808878936518092 6.46196656911713e-05 0.000231451414266418 0.000540039622487602 0.00014799334867299 0.000262426452750269 0.000253180087343042 0.000229624918308674 5.10444791778846e-05 2.40580520054687e-05 9.09347029080039e-05 6.73052834028568e-06 2.94557365791778e-81 4.39663738934311e-05 2.28763425139363e-05 3.27446511233413e-05 3.64354794870338e-07 1.49696852231223e-09 9.049350547179e-23 0.000266380063857371 0.0010283750284182 7.66401025896298e-05 6.01224399902962e-10 1.64812678557791e-15 0.000182781824888494 0.000452255829166135 0.000445359241444418 7.65048313014709e-05 1.19869615586121e-71 4.59752092447147e-05 2.69693591881284e-99 XM_002685609.3 KIAA1522 PREDICTED: Bos taurus KIAA1522 ortholog (KIAA1522), transcript 0.0 9708 100.00 0.99962852897474 NM_020888.2 KIAA1522 Homo sapiens KIAA1522 (KIAA1522), transcript variant 1, mRNA. 0.0 4466 84.59 0.742570579494799 TCONS_00106451_7 sp|Q9P206|K1522_HUMAN K1522_HUMAN Uncharacterized protein KIAA1522; 0.0 1197 83.87 0.929433611884865 1 coding 0 0 0 0 -0.322650500204188 0.132265544681546 0.0145724548964476 0.775095718695203 ATGGCGGCCCGCGCGTCCCCCGCCGCACCTGCGGCCGACAAGCCGGGGGGCCCCGGCGGCCCCCCGCGCAAGAAGAAGTCTCGCTCGGGCGCGTCCGGCCTCCGCCGCGCCTTCAGCTGGCTGCGGGGCAAGCGGCGCAAGAAGAAGGCGGCGGGGGCCGAGGGCGCCGAGCCGGCCGCCCCCCGGGCCAAGAAGGCGGACGACAAGGCCAGGAAGGCCAAGGGTAAGGGCCGAGGCTCTGCCAAGGCTGAGAGCGACAAACGACTGAGTGTGGGGCCTGGCCAGGGGCCAGGGTCTGTAGTGGACGACCACCAGGACAATGTCTTCTTCCCCACTGGGCGACCGCCTCACCTGGAAGAGTTACACACGCAGGCCCAGGAGGGGCTCCGTTCCCTCCAGCAGCAAGAAAAACAGAAACTGAACAAGAGTGCCTGGGACCATGGAGACACCCAGAGCTTACAGTCTTCCCGCACTGGGCCAGATGATGATAGCATCTCCTTCTGCAGCCAGACCACGTCCTACACAGCTGAGAGCTCCACGGCAGAGGACGCGCTCTCCATCCGCTCTGAGATGATCCAGCGCAAAGGCTCCACCTTCCGGCCCCACGACTCGTTTCCCAAACCATCTGGAAAGTCGGGGCGCCGGCGGCGGGAGCGGCGGAGCACGGTGCTGGGACTGCCGCAGCACGTGCAAAAGGAACTCGGCCTGCGGAATGAACGTGAGCCACCAGGTACGCCTCGGCCTCCGGGTCCACGGGACGCTGTACGCATTCCCACAGTGGATGGCCGTCCGGCAGGCCCGGCCGCGGGGCCGGGGGCCAGGGTGTCCCTGCAGGCGCTGGAGGCAGAGGCCGAAGCTGGGGCCGAGGCCCTGCTGCAGCGCCACATCGACCGCATCTACCGCGATGACACGCTCTTCGGCCGGTCCACGGGGGCGCGGCCCCCGCCGCTAATCCGGCCCATGTCCCTCGCAGTGCCCGGACTGACGGGAGGGGCCGGGCCTCCAGAACCCCTGAGCCCGGCCATGTCCATCTCGCCCCAGGCCACCTACTTGTCGAAGCTGATCCCACACGCCGTGCTGCCACCCACCGTGGACGTGGTGGCCCTGGGCCGCTGCAGCTTGCGCACCCTGAGCCGCTGCAGCCTGCTCTCAGCCAGCCCAGCCTCCGTCCGCTCTCTGGGCCGCTTCTCCTCGGTCTCCAGCCCGCGACCCCGAAGCCGCCACCCTTCCTCCTCCAGCGACACCTGGAGCCATTCTCAGTCCTCCGAGACCATTGTGTCTGATGGCTCCACCCTCTCCTCTAAGGGTGGCTCTGAGGGCCGGCCAGAGGGCTCCGTGGCCAACAGTAGCGTGGCGCCCCCTCCGCAGGGAGGCAGCGGGCGGGGCTCTCCCAGCGGGGGCAGCACCGCTGAAGCCTCGGACACTGTCAGCATTCGGAGCGGGGGCCAGTTGTCAGGCCGGAGCGTGTCCCTACGTAAGCTGAAGCGGCCCCCTCCGCCTCCCCGCCGGACCCACTCGCTCCATCAGCGCAGCTCGGCGGTCCCTGATGGGCCTTTGGGGCTGCCTCCCAAGCCAGAGCGGAAGCAGCAGCTGCAGCCGCCCCGGCCGCCCACCACTGGAGGGTCGGAAGGGATGGCGGCCCCGCACTGTCCACCCAGCTCGGCAGGCGGCTGGGTGTCTGGCTTGTCTCCGGGTGGCTCCCGGCGCCCCCCACGTTCCCCGGAACGGACACTCTCACCCTCCAGTGGATACTCAAGCCAAAGTGGTACCCCTACCCTCCCCCCCAAGGGTCTAGCAGGGGCCCCTGCTTCCCCAGGCAAGGCCCAGCCCCCCAAACCAGAACGTGTCACTTCCCTTCGATCTCCCGGGGCCTCCGTCTCCTCCTCCCTCACTTCTCTGTGTTCCTCTTCCTCTGATCCAGCACCTTCAGACCGCTCTGGTCCTCACATGTCGACTGCCCTGGGCGACAGGTTTGTCATACCTCCTCACCCCAAGGTGGCTGCCCCCTTCTCCCCACCTCCCTCTAAGCCCAAGAGTCCAAACCAAGCTGCCCTTGCTCCTGCTGTAGTCCCTGGGCCTGTCTCTACCACTGCTGCCAGTCCTGAGTCCCCACCCACTCCCCAGACATCCCTGACCCCACCTCAGGCATCTCCTGCTGCCTCCAAAGACCAGTCACCCCCTCCGTCCCCACCCCCATCATATCACCCACCCCCACCCCCCACTAAGAAGCCAGAGGTGGTTGAGGGGGCCCTGTCTGCCCCAGAGACCGCTGAGGAGCTCCTCCAAGATCCCAACTGGCCCCCTCCCCCGCCTCCTACCCCAGAGGAGCAGGACCTGTCCATGGCCGACTTCCCACCACCCGAGGAAGCCTTTTTCTCTGTGGCTAGCCCTGAGCCCGCAGGCCCTTCACCCCTCCCAGAGGCCTCCTTACCTGCTGTTTCCTTCCAGAACCAGCCCTCTGGTACCCCAGACCCTCCTCCCGCCCCGCCCGCCCCACCTGCTGCCGGCTCTGTCGCAGGGCTTCTGGCCAAGGCCCCTCGGAAGGAGCCAGTGGGCTGCAGCAAGGGTGGGGGCCTTCCCCGGGAGGATGCCAGTGCGCCCCTGGTCACACCCTCACTCCTGCAGACGGTTCGGCTGCGCTCTGTGGGCGCTCCCACAGTGACTCCAAATCCAGCATCGGGGCCATCACCCCCCCAGAAGCCACTCCGAAGGGCCCTGTCAGGGCGGGCTAGTCCTGCGTCTGCCGCCTCCTCAGGGCTCCATGCAGCTGTTCGGCTCAAGGCCTCTAACCTGGTTGTCAGCACAGGCCCTCTGGGTGCCCAGCCCAATGGACCACCTGAGGCAGAGCCACGGTCCCCTGCCTCTACGGCCAGCTTCATCTTCTCCAAGGGCACTAAGAAGCTGCAGCTGGAGCGGCCTGTGTCCCCGGAGACCCAGGCTGACCTCCAGCGGAACCTGGTAGCTGAACTAAGGAGCATCTCAGAGCAACGGCCACCCCAGGCCCCAAAGAAGACACCTAAGGCCCCCCCGCCTGTGGCTCGCAAGCCTTCTGGGGGCATTCCCCTTCCCACCTCCCCCAGCTTCCCTCGAGCTGAGCCCCTTACTGCGCCTCCCACCAACGGGCTCCCCCATGCCGAGGACAGGACTAAGGAGGAGCTGGCAGAGAATGGAAGTGTCTTGCAGCTGGTGGGCCCGGACGAGCAGAAGCTGGGCCCGCCTAGTACAGACGCATAGAAAGAGCTGGTCTGACCACCAGACACCTCGCTGGTACTGCTGACCCATCCCAGGAATACATTCTCAGGGACCTGAGCGGCTCCGAGGATGAGAGGATACGGCAGACACTTAACCTAATGGGGGGACGCCTGCAGCCTTAACCTCCACGGCCTTCGGTATTTATGCAAGCCTGTGTGGATCCTGTCCTCCAAGTCACCCAGCTCTCATGCCTTTTCCTGAATGGACTCACCTCTGGCAGCTGCTGCTTCAGTCTTGGCCTTAGCCTCATCTTGGAGGAGGTAGCTGGTGGGAGTGGATGTCAGCGCCCCCTGCTGGCCTCAAGGCCACAAAGATGGAGGACCACAGCACCTCTTTTTCTTTTTGTTCATATCCAAATCATGCACATGCTGTAGTCCAGAATCAAAGCACTTTTGAAAAGTGGCTGCATGTCCATTCCCCAGGGCCCGTGAAGCCACATTCCAAGGGCCTGTTTACATGGCAGCAGCATCAGTCCCCAGCAGCCAGCCCTTGGCTGGGACTAACCTGTCCCCCTCTCCTCTGATCCAGTTTGCTCCTTTTCTTAGTTCTTGGAGGTAGGCAAGTCGTATTCCCACAGGCTTCTCCAGGCTGGAGGCAGGCTTGGGGCTGTGGCATTCCAAAGCACAAAAGGTGCAGCGGGGGTTAGTCCCCCTGTGCCTCAACTTACCACCAACCAGCTTCCTGCCTTCTAGTTCTGCCAGGTGCTTCATGCAGGGGACAGGAAGTGGGAGCCTGTCAAGGTCCAAATGGGTGGTGGAGAACACCAGAGGGGAGGTTCACAGGCTCACCCTGCCCTCCGAGAACAGAGCAGGGAGTCATGTCATGGGTCACTTGGCCCCATTTCACTTGACCAGGTTGGGGTGCGCGAGCATGACTCTTTAGAGGCAGGAGCCCATGGGCCATGGCAGAGCTGGGTCCCTTTCAGCTTGGCAGGAAGTACTGAGGACGTGGATGAAAGGGTGGGGCTGGGGCTGGCAGGGAAGAGCTTCTTTGGGCAGTGGGCTGGGACCTGGCCCTGTGGATTTCATCCTGACCTTCCTTTGCTCTGTGCATGTCCTTTCTGCAGCTGCCTGTTAGTGCAGGTGGTTCCACTGGGGGAGGGTGCTGACGCTGAGTGACAGGATGGGAAGCCAAGGGTGCATTCTATTCCAGACTTTTCCCTAGTCAAAGAGGGGGCACTTGATGCTCCTAGGGGCAGGCTGGGTGGTTCCCCCCCGCCGTAGATGTCAGTCTCTTGCTACTGATCTCTCCAGGAATCTTAGCGATTTTTCCATTTTCAACCAGTGCCACCTATGTTGGTAAGCTAGTTTCCTCCAAGGTTCCATGGGGGTGACCCTAGTGCTTCCTCCCGCTGCAGGGTGGCTGTCACCAGGGTCACCCCTTCTGTATTGATCTTCTTTCTTCAACAGTGACTCAGGCTTGAGCTGGACAAGGAACCTTTTTAGCTGCTTCTCCTCCACCCAGGAGACAGGTTGACCCTCTCCCAGAACAAGAGCTGGGAACACAGGGGATGTCGTTGGAGAGCCCAGGTTCCTCTGGCCTTCTCCACCATCTTCTCTTCAGCTATAAACCAGTGTTCTTCCGTGCCCGCTGGGTATGTGTTGTCCCTGCCCGGTAAGATGGGGAAGACAGTCGGTAAACCAGCTCTGCTCAGAGCTCTTGACCAATCTCCTGGGAATGGGGGACTAGGACCAGGCCAAAGCTTCCATGACATCAAGCCTAGGCAGCAGCCACAGAGCTGCTGGAGCTGAGAGGGAGCCCACCTTCTGTCTCTTTGCCTCCCCTCTCTCTGTTACTCCTTATCTTCAGTTAGTCCTCTGAGCTTGTTTCCCCACTGGGTGGGACAGAGTTGAAAGGAGAAGGGAGGATCTCCCAAGAGGCAATCCTTCTTTGTCCTCTGGGGTAAATGAACTTGACCTAGTGCACATGGAGACCAAAAGCCTCTGATTTTTAATTTCCATAAAAATGTTAGAGAGAGAAGTATATATATATATATATATATTTCTTTAAATTTTTGAGTCTTTGATATGTCTATACAATCTGTTCCCTCTGCCCTGAAGCCGGAGTGAGACACATGGAAAAACTCTGTGTGGATTTCATTCGAAGGTGTTAATTAAATGATTAAAACTTGG EMBV3_19207 ACTCTGCCTGACTCAAAAGGGCTCTAGTCCACGGGTGGGTTTCCTGCTTATCCCATTTGT Gene GeneID:534750|VPS25:NM_001015657:166_cdna Constitutive 2 NULL GeneID:534750 19 GENE VPS25 MGC10540 vacuolar protein sorting 25 homolog (S. cerevisiae) EMBV3_25585 CTGCAGATCACCAAGGCCTCGGCAGGGCAATCCCTAGTTTTCTAAGAACGAAATGTGCAA Gene GeneID:617018|RNF4:NM_001046589:34_cdna Constitutive 3 NULL GeneID:617018 6 GENE RNF4 MGC137906 ring finger protein 4 EMBV3_07237 CCACCCCTGTGTTCTTGGTTATTTCACATGATTGGACATGCGAGGGGACCGTGTAGGACA Gene GeneID:317706|PGRMC1:NM_001075133:11_cdna UTR3_Alt 2 NULL GeneID:317706 X GENE PGRMC1 NULL progesterone receptor membrane component 1 EMBV3_02556 CCCAGATGGGATTGTCTGGTTGCAGGAAAACAAGCTTAGGGCTCCCACTGATTCTGCATT Gene BVT0102_178682 + 0 NULL GK000006.2:96746177-96794833 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02952 GAAGAGGACACACCTTCGTATCACAGACGTTATGACTTTTTTGTATCTCGCTTCAGTGCC Gene GeneID:100336574|LOC100336574:XM_002692604:32_cdna Constitutive 0 NULL GeneID:100336574 14 GENE LOC100336574 NULL EFR3A protein-like EMBV3_35983 TCTTCGGCTTCTTCATCCCGCTGGTGTTCATGATCTTCTGCTACGCGTTCATCGTCAAGA Gene GeneID:519716|CCR6:XM_002690392:11_cdna Constitutive 0 NULL GeneID:519716 9 GENE CCR6 NULL chemokine (C-C motif) receptor 6 EMBV3_04647 TACTGCACCGGCCAGGCTGGATTTAAAACTTTTTTTACAGGCTGGTGGATTATCATAGAT Variant GeneID:504456|TMEM50A:NM_001075163:72_cdna 76^180 2 EMBV3_02178 GeneID:504456 2 GENE TMEM50A MGC139369 SMP1 transmembrane protein 50A EMBV3_27682 GAATTTCAAGTTCCATCCTGTAAATGTACGTGTTGTCATGCAGGGTTGGCCCAAGAAAGC Gene GeneID:504650|CEPT1:XM_002686145:258_cdna Constitutive 4 NULL GeneID:504650 3 GENE CEPT1 NULL choline/ethanolamine phosphotransferase 1 EMBV3_16725 TTCTTGTAAAGTTGCTTAAATGATTTTTGAGGCAAAAGAACACCTTTATTTATATACTTG Gene GeneID:509259|GTF2F2:NM_001038064:70_cdna Constitutive 3 NULL GeneID:509259 12 GENE GTF2F2 MGC133695 general transcription factor IIF, polypeptide 2, 30kDa EMBV3_19749 TTGGGAATCCAGTCCCCAAGACGAAAGACCCTCCCCGCTATGAGGAAGCCATCAAGCAGA Gene GeneID:511461|MKL2:XM_002698031:238_cdna UTR3_Alt 2 NULL GeneID:511461 25 GENE MKL2 NULL MKL/myocardin-like 2 EMBV3_28247 CCACTTTGTAGGGTATGGTTCAGTGTTAGTACATTCACGGGGCTGTGCAGCTTCCATCTC Gene BVT0101_034003 + 0 NULL GK000019.2:52124533-52177577 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097687 TCONS_00097686 1 XLOC_058316 NonCoding TCONS_00097686 XLOC_058316 NonCoding NonCoding - 19:52168918-52169996 - TSS72332 1078 2 TCONS_00097686_1 89 0.431354359925789 1 0 0 0 1.15568147272815e-11 0 0 0 3.9855969870616e-09 4.27928526227313e-09 6.07766211467127e-09 0 0 0 0 0 2.75708096877362e-09 0 0 0 0 0.000473646363472404 4.32470255217178e-05 0 0 0 0 0 4.87458728737109e-09 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 7e-54 215 84.50 0.181818181818182 0 noncoding 0 0 0 0 -0.000736964186571432 0.995559260065036 0.0209332864629819 0.657121477860057 CAATGACCACCTGGCCCTGGCCCTTCCCTTGGGTGTCCTGGAGCATCTCAAACCAAACACAGCATAGAATCCACGTCCACCTCAAGGCAAACCCACTCCCTGGGTCCCTCCCATCCCTTCCCCAAGTGGGATACCCCAGCTGCCTCTGGATCCCTCTTGTCCACTGCCCAAGTCCAGCCCCGCTGAGGCCACTGAGTTCCAACCCACAGCCCGACCCGGCCCAAACACCTTGGGGCTCTGTGGCTTCCAGGCTATTCTTCATCCAGGACTGAAGCCATCTTCCAAAAGCACCACCCAAGTCCTCACCGAGCCCTCTACCTGCCCGCCTGCCCTTTGGTGGCCATCCCCGCGCTGCTCCTTCACCCTCGCTGTACCTCGGCCTGGCTCGATCTCAACATCCCTGGGAGCCTAAGACACACGCACTCAGGAAGCATTTCCAGTTAGCCCAGTACCTCGGTCTTCGTCTGCTGGGAGGGGCCAGGCCACCACTCTGAAAAATAAGTGAGCCATCTGAGCCACTAGGACGGCCATGATATTTAAAGCAGAAAATAACCAGTGTTGGTGAGGATGTGAGAAAAGAGGGGCCCCGGCACGGCTGATGCAGGAGCCGTGGGTGATTTCTACAGCTCCTCCATGGCACCATGTGTTCAGGACAAGCAAGTCTAGTGGGCAGGGGCTGGGGGCACTGGAGTGGCACAGGGCTTCTTTTTGGGGTGGTGGAAGGCTCTGGAAATAGAGATGGAAGCTGCACAGCCCCGTGAATGTACTAACACTGAACCATACCCTACAAAGTGGTTCATTTCATGTCATATGAATTTAGGGCTTCCCAGGTGGCGCTAGTTACAAACCCACCTGCCAATGTAGGAGACTTAAGAGACACGGGTTCGATCCTTGGGTCAGGAAGACTCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTTTTGCCTGGAGAATCCCATGGAAAGGGGAGCCTGGTGGGTTACAGTCCGTAGGATCACAAAGAGTCGGACATGAACAAAGCCACTTAGCACGTGTGCATATGAATGTCACATGAATTTCACCTCAATTAAAAAAGT TCONS_00094459 r 3' 528 TCONS_00094459 r 3' 1605 EMBV3_41832 ACATGGCGTGTGGCTCTGTACCCGATGGTGCGGAAAGCAAACATTCCTGTCATTGCAGAA Gene BVV0102_102172 + 0 NULL GK000022.2:14492711-14870572 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40246 CTACTCCAAGGTGCAGCAGAGACGACAAGAATTAGAGCAAGCCCTGGGGATCCGAAATAC Gene GeneID:533232|SMARCD1:NM_001038559:89_cdna Constitutive 0 NULL GeneID:533232 5 GENE SMARCD1 MGC133629 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 EMBV3_39332 GCAGAGAGATGCTGTAAAAACGGGTATTTTTAGATGCCACACAGTCATGTGAGCCATTAA Gene BVT0102_087092 + 0 NULL GK000010.2:15004157-15009939 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012763 TCONS_00012768 TCONS_00012770 TCONS_00012764 TCONS_00012767 TCONS_00012761 TCONS_00012760 TCONS_00012765 TCONS_00012769 TCONS_00012771 1 XLOC_007922 Coding TCONS_00012763 XLOC_007922 Coding Coding PIAS1 10:14878518-15008068 j TSS9615 6146 2 TCONS_00012763_4 312 13 0.952658839512462 5.38788766455895e-06 0.00417083788045503 0.00320303651176872 0.00100067057157941 0.000790860592648919 0.000651010029753021 0.00180100351950773 0.0017679639684565 0.00153322890947309 0.000126887985375787 6.76255411827109e-07 1.77225175091787e-13 4.97313895949364e-05 8.21642713252228e-16 1.96151917759744e-07 9.89254410500515e-19 0.000708917212244314 0.000227875838718402 0.00136104265395161 0.00114748961592689 1.60722692705436e-08 5.49752278847579e-10 0.000536452342561222 6.56706622669372e-08 0.00169795677404045 0.00145148610349906 0.00140204857381524 2.09887830129505e-09 5.94350325448981e-10 3.02924198051133e-06 XM_005211290.1 PIAS1 PREDICTED: Bos taurus protein inhibitor of activated STAT, 1 (PIAS1), transcript variant X1, mRNA. 0.0 8543 100.00 0.770582492678165 XM_005254734.1 PIAS1 PREDICTED: Homo sapiens protein inhibitor of activated STAT, 1 (PIAS1), transcript variant X1, mRNA. 0.0 5189 84.29 0.769768955418158 TCONS_00012763_4 sp|O75925|PIAS1_HUMAN PIAS1_HUMAN E3 SUMO-protein ligase PIAS1; 0.0 639 98.08 0.996794871794872 1 noncoding 0 0 0 0 -1.05650782856109 0.00209215125118059 0.0239463014422564 0.616797114457976 GCACCCGGAGCGGGGCGGAGGCCCGGGGCGGGCCGGGGAGGTGGAGGGGAGAGAGGGGACGGGCCGGGGCGGGGCCAGGCTGGCTAGAGGGGCGGGCCTAGCGGCGGCCCCCGGCGAGGTTCACTGCGCTTGCGCTGACAGACGCAAGATGGCGGACAGTGCGGAACTAAAGCAAATGGTTATGAGCCTTAGAGTTTCTGAACTCCAAGTACTGTTGGGCTACGCTGGGAGAAACAAGCACGGACGCAAACACGAACTTCTCACAAAAGCCCTGCATTTGCTCAAGGCTGGCTGCAGTCCTGCTGTGCAAATGAAAATTAAAGAACTCTATAGGCGGAGGTTCCCCCAGAAAATCATGACGCCTGCGGACTTGTCCATCCCCAACGTACATTCAAGTCCTATGCCAGCAACTTTGTCTCCATCTACCATTCCACAACTCACTTATGATGGTCACCCTGCATCATCACCGTTACTCCCTGTTTCTCTTCTGGGACCTAAACATGAACTGGAACTCCCACATCTTACATCAGCTCTTCACCCAGTCCATCCGGATATAAAACTTCAAAAATTACCATTTTATGATTTACTGGATGAACTGATAAAACCCACCAGTCTAGCATCAGACAACAGTCAGCGCTTTCGAGAAACCTGTTTTGCATTTGCATTGACGCCACAACAAGTGCAGCAGATCAGTAGTTCCATGGATATTTCTGGGACCAAATGTGACTTCACAGTGCAGGTCCAGTTAAGGTTTTGTTTATCAGAAACCAGTTGTCCACAAGAAGATCACTTCCCACCCAATCTTTGTGTGAAAGTGAATACAAAACCTTGCAGCCTTCCAGGTTATCTTCCACCTACTAAAAATGGTGTGGAACCAAAGCGACCCAGCCGACCAATTAATATCACCTCACTTGTCCGATTGTCTACAACTGTACCAAACACCATTGTTGTTTCTTGGACTGCAGAAATTGGAAGATTAAAGAGAAGTTGACTGCGGATCCAGACAGTGAAATAGCTACAACCAGCCTGAGGGTTTCTCTACTATGTCCACTTGGTAAAATGCGGCTGACAATTCCATGTCGGGCCCTCACATGTTCTCATCTGCAGTGTTTTGATGCAACTCTTTATATTCAGATGAATGAGAAAAAACCAACTTGGGTTTGTCCTGTCTGTGATAAGAAGGCCCCATATGAACACCTGATTATTGATGGCTTGTTTATGGAAATCCTAAAGTACTGTACAGATTGTGATGAAATACAGTTTAAGGAGGACGGCTCTTGGGCACCTATGAGATCAAAAAAGGAAGTACAGGAAGTTTCTGCCTCTTACAATGGAGTTGATGGATGCTTAAGCTCCACATTAGAGCACCAAGTGGCTTCTCATCACCAGTCTTCAAATAAAAGTAAGAAAGTAGAGGTGATTGATCTAACCATAGACAGTTCATCAGATGAAGAAGAAGAAGAGCCATCTGCCAAGAGAACCTGTCCTTCCCTGTCTCCCACATCGCCACTAAATAATAAAGGCATACTGAGTCTTCCACATCAAGCATCTCCAGTGTCCCGCACCCCAAGCCTCCCTGCTGTAGACACAAGCTATATTAACACATCCCTCATCCAAGACTACAGACATCCTTTCCACATGACACCCATGCCTTATGACTTACAAGGGTTAGATTTCTTTCCTTTCTTATCAGGAGACAATCAGCACTATAACACCTCCCTCCTTGCTGCAGCAGCAGCAGCAGTTTCAGATGATCAAGACCTCTTACACTCGTCTCGGTTTTTTCCATATACCTCCTCACAGATGTTTCTCGATCAGTTAAGTGCAGGAGGCAGTACTTCTCTGCCAACCACCAATGGAAGCAGTAGTGGCAGTAACAGCAGCCTTGTATCCTCCAACAGCCTAAGGGAGAGCCATGGCCACACCGTCGCGAACAGGAGCAGCTCGGACACGGCAGCCATCTTTGGCATCATACCAGACATTATTTCATTGGACTGATCCCCATGCCCCTGCTGCTCCCATCCCCACCCCAGATTAAAGGAACTTGGCAGAAAGAAGAGAACTTTGTGCTATGTTTTACCTTATTCTGTTTAGAAAAGTACACAAGCGTGTTTTTTTCCTTTTTTTAGGGAAAAAATTAAAAGAAATGTACAGAGAACAAAACTATATTTTCAGTTTTACTTTTGTATATAAATCTAAGACTGCCTGTCTGAAAAAAAACCCTTGTAAAAAAACAAAAAAAAAAAAGAAAAAAGAAAGAAAAAGAAAAAAAAAGTACCCACAAACCACCTTCGGTTCATTTTTTCTGGATTCTGAAGATTTTTTTTTCATCGTTTGTCCTATGGTTTTGGTTTTATTTTACTTCAATGGCATTATTTTATTTGCAATAACAGAAAAGGAACTGCATGTATGAAGTTTTAAATTGTGGGCTTTTCTTTGTTGTGGGGAGGGGGCCGGGGGGGATAGTTTTAATTTCCATTTTCTAAAAATGACAGACTTGGATTCTCTGTGTGTGCATACTTTATTCAGCCTTAAGTTATAAGTCTCATCTGTCGCTCTGCATTCCCTGTGTATTTTCAGGACATAGCTTGTAGGCGTGTGTGTTCAGTGTGTGTGTCTGTGTGTATTTTTCTGTCATTGCTGTTCCTTCTCCCGAGTTTGCATTCAGTTGATAAACCAGTTGCCTGCTTCTTTCAAAGTGCTTTGAAGGTCTTGAATTCACATATGAGCATCTTTATCAACTGTCCCAATTGCATGTTCTCCATCACATATTCTCTCTTAATTGCTAGATGCCCCCTGAGAATATGTTTCAGAGATTGGAGTAAAGCTGTCTGGGTAAGGAGTAGGCTTAGTCTAGTTCTTTATTCTAAATTTGGATTGCCAGTATTATGTATTTAAACCAAGTCTGTGAACACCTGCTATTTTGGCCACAGGGTAACAAATTTTCCTGTAAGATCGTCATACCAAAGTAGGAAGTAAAAATAGCATAGAAAGCCCTGTTGGGTGTCATGTGCAGCTGACAGAGGTAAGGCTACATCACCTCAAAAAAGAAAGACAGACAGTCAATTATCCTTAAAAGTAAATTCTCTTCAGAAAATAGAGTGCACCATACATGTCCGTCTGTAGAAATCTATCATCTGATAAATAATTGAAATTCAAAATGGGCTTAATCCTTATTCATTTTCATTCTCTGGTTCTGACTGTACTTATTTTTAGCCTAGTAATCTTGTTTATTTTTTTCTTCACTTTTTAAATACAAGCATGACATAGGAAAGTCAGATTTTTTTAAGAATTCATGGATCAGTCTGATCTATCCTTACTAATAATGGAACATGTAAATATATTGAAAACTGTTTTTCAGGAAATGAGTGAGGGTTGGAGGGAAGGAAAAAGTGATTCTACTTGTGTTCCAAAATCCTCGTCAGAGAAGGTATTAATGTTCTTCAGGTAATATCTGAAAGTGTCGAAAATATTTTTTATCTGATTGAAAGGTTTAGCAGATTTAACAGAAAAGCTAAAGAAGGGGCATAATGATTACCAGTTTTCCAAACTGGATTTTTATATCACAACTGTTAATATTCTCAGAGTTGTTCTCAGAGTTGATCAAGGACCACCTTTGTGTATAAAATTGTCATATTTTAAACCTTGCAGTGGTAACAAATTGACCTACTTTAATCCAGTTAGAATTCAAGATGGCTATGTCTTCAATTGTATGATAAAATTAATGGCTCACATGACTGTGTGGCATCTAAAAATACCCGTTTTTACAGCATCTCTCTGCCACCAAATTGTTGACTTGAATTTTGAAAAACAAGTTGGTATTGATATGTATATGTGTGTGTGTATATATGTATTTATAGACAAGTGTGTGTGAGTAACAAGTGAGTTATATAGTCTTCCCTACGCATGTGTATTCCACACATACATGGCTGAGTTATAGTCACTAAACAACTTGCAATAAAAAAAAAATTCATTGTCAGTTAAAACAGGAAATAGTTAAGTTTTTTAATGAATCTGGTGTTATGGTGAGTAAACACTTTAGAACTCTCATTGCCATGTTAACTTAGGCTAATATCTAATAGTATTATAATTTGTGTCTAATTCAGATTGGGATAGAAATTACTTCAATTGTAGGGAGTTGCTTCTTATTTCACATTGTAATAGGAAATGTTTCTATTAAGTCAGCTTCCTGAGATAAAATGAAGAGTTTTGTTTTTTTCTTTTTTGTCGTCGTTAGTGGTCTCAGCATTCTGATCAATAACTTTGTGTATGATGCTGAATTACGAACTCTTTGAATGATCCAGTTGAAAACCCGTCCCTCTACTTTCTTCAGCCCAGTTTTGGAGAGAGTCATTTTCCCTCAGTGTCTTGCGTTATACCAATCTAAGGGAAGAACAGGTAACAGGGAGAAATAAATGTCTGTCTAGTAGCTTTGGTCATGTCTCCACAGGAGCAACTAACCGTTCAGTTGTCTTTTTATTTTAGTTCATTCCACTCTAAGCAGCTTGTTCCCTTCAGTTATTAACTTTCTCAAATGTTGCAGTAGTAGTACCTATTACTCTGGTGGTCTCATGGCCGATGTTAATCAATCAGACTTTTATGATCCATAGTAATTATTAGTGGAGTAATGCACTGCATCTTTATCTTCTAAGTTTTTCTTTTTTAAAGCACAGTTGTTTCTTTTTTCCCTAGCCAACTATCATTACCCCCCCACCCGACCCCCTACCCCGGCACAGTGCTAACACTGACATGCTGTCTGTGGACAAATGACGATTCTCAGAATCTTTAGTCGAGTTACCACCATCCCCCTTGCCTTGGTCACTCATAATAGGTGTGCATATGTTTGTGTTTCTGTACAAAACTGTGGGGGTGTGTGTATACGCACACACACCTTTAGTATAATAGCTGTTTGACTAGCAGGGTTGAAGTGGCTTTTAATTACTTTGTGGGCATTATTAAACACGTTTTTAAAACTATCTGGACCTTAACCATGCCACGCTTGGTTGACTAATTTATTTTGAGCATTAAAATTTTTCTACTCCTGTTAATTTAGACATTATCACAATTCTCTATTACTGACTTAGAAAAGATATACTTAAGCTTCTGAGAAATGTGATTTCTTGGCAGATATTTCTTTGAGTCAAATGTCTGAAGCTGAATGGAAATATATCCCAATTTTAAATTACTAATTGTAGAAAGAACATTGTTTTTAAACAATTTTAAACACATAAAACACTTCAAGATCTTTAGGACTTTAAAGCACATTTGAAATTATTTTAGTAAAATTTTAGTAAGAATTTTGTTTTTTCAATACATGTTGGATTCTGTTTTTTTAATTAAAAGAAAACACAAAGCTTAGATTTCAGAAAGAGGGAGGGAGACTAGCTGGTGGTTCCAGAGTGTGCTGCTGTTAACTGTTTAATTAACAAAGGGGAAAAATGTATATAAACAGATATAAAAGTTACCATAAATTCCATGAACTTAAATCTGTGATTCATTGCCTTAAAACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTTAAAAATGTATAGTAGACCAATGTCAGTTTGTATAAAAGTACCAAGTGAAAATATTTATTACATGCATTGGAAAAAAAAAATTGTTTACCTATTGAATGTTACCTGTTTATGTAGAGCTCTTTAGATGTAATAAAAGAAAAACCTTCAGTTAATTTGTCTTCTGTAAAGTATGCTGCTGGGTATACGAGGGGACAGCCCCTAGGAGAAAAAGTGACGATGCTTTGTGCTTCCAGGGCCCCTTTGAAGCAGAGACTTCAAAGCATGACAAGTAGTTCATTCTCTTGCAGCATGCTTTGAGGTAAGTCATGAATATACAGCTGTCATTCCCCTTTCTTACTGAAATACGGCTAGCTTTGTAATGAACCACAGCATAGTTTTCAATCTGTTTAATTAATTTGCAGTTTGACTGTTAAGAGCACTGTGACCTTTTTTGCACACCATACTAGGCACTAGGTAAACCAGTTTCAGGAATGAGCATGAAACCCAGGCATGGGATCCTTGTCAGAGCCTTATCTGGGGTATATTTTTAAATTAGAACACATCCCAGGATCTTGGAATCCTACCCACTGAACACCCTTAAAACACA EMBV3_37601 TACTCTCTGGCTGAAATGCTGAACCCACACATTGACCATTGCTCTTCCATCAGTGACTCC Gene BVT0102_153055 + 0 NULL GK000006.2:100011718-100013831 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206003 TCONS_00205998 TCONS_00206002 TCONS_00206000 TCONS_00205999 TCONS_00206001 1 XLOC_124802 Coding TCONS_00206002 XLOC_124802 Coding Coding FAM175A 6:100009019-100031261 = TSS153707 6429 1 TCONS_00206002_2 410 0.187276403795303 9 0.711343914392338 0.000680503350767613 0.000281420050416254 0.000286329840091318 0.000232259891414909 0.000937173602687452 2.90901026611237e-08 5.73545140392821e-13 4.29518237814149e-14 0.000333411364055288 0.000218251983568776 5.37907104639594e-21 5.45295615078613e-08 2.48874235892297e-43 0.000134629130990677 0.000131125556026181 0.000907638474661976 0.00150928594396475 0.00171545318004764 0.000903109173046138 0.0010472379327091 6.63768694829694e-05 0.000275458579280114 0.000794960048574207 0.00072616010799754 0.00122532560074735 0.000922301710596985 0.000764111021761413 2.27768608043742e-09 9.54602219766902e-09 9.65608429995522e-05 NM_001015516.1 FAM175A Bos taurus family with sequence similarity 175, member A (FAM175A), 0.0 2769 99.93 0.239072950692176 NM_139076.2 FAM175A Homo sapiens family with sequence similarity 175, member A (FAM175A), mRNA. 0.0 1499 83.58 0.215896717996578 TCONS_00206002_2 sp|Q5E9P1|F175A_BOVIN F175A_BOVIN BRCA1-A complex subunit Abraxas; 0.0 852 100.00 0.997560975609756 0 coding 0 0 0 0 -0.314448732933115 0.628289485725391 0.00751750981599852 0.912736778830365 AGTGCGCAGGCGCAGGCCCGCCTCCTCACTCGGCCCCGCCCACTCCCCGCCCCCTGGGGCCGCACGGCGGCGACGGAAGCATGGAGGGCGAGAGCACGACGGCGGTGCTCTCAGGATTTGTGCTCGGCGCGCTCGCCTTCCAGCACCTCAACACCGACTCGGACACGGAAGGTTTTCTCCTCGGGGAAGTGAAAGGTGAAGCCAAGAACAGCATAACTGATTCCCAGATGGATGATGTTGAAGTTATTTATACAATTGACATTCAGAAATACATTTCATGCTATCAGCTTTTTAGCTTTTATAATTCTTCTGGTGAAGTAAATGAGCAGGCGCTGAAGAAAATATTATCAAATGTCAAGAAGGATGTGGTTGGTTGGTACAAATTGCGACGTCATTCAGACCAGATCATGACATTTAGAGAGAGACTGCTTCACAGAAACTTACAGCAGCATCTTTCAAGCCAGGAACTTGTTTTTCTGTTATTAACACCAAGTATAATAACAGAAAGCTGCTCTACTCATCGACTGGAGCATGCCTTATATAAACCTCAGAAAGGACTTTTTCATAGGATACCTTTAGTGGTGGCCAATCTGGGCATGTCCGAACAGCTGGGTTATAAAACTACATCTGGTTCCTGTACATCTGCTGGTTTCAGTCGAGCAGTAAAAACACACAGCTCTGAATTTTTTAAAGAAGATGGATCTTTAAAGGAGGTGCAGAAGATAAATGAAATGTATACTTCTTTACAAGATGAATTAAAGAGTATATGTGAAAAAGTAGAACACAGTGAGAGAGCTGTAGAAAAACTACTAAATGATGTAAACAGATTAAAAGGAGAAATTAAAAAAAGAAAACAAGCACAGATGCAAGCAACACGAGAGAAGAATGTCCAAAAAGACCCTCAGGAGAACATTTTGCTTTGTCAAGCTTTACGGACCTTTTTTCCGGATTGTGAACTTCTTCATTCATGTGTTATCTCCTTGAAAAATAGGCGCATTTCTGGAAGTAGCTGTACTACCACCCACCCTCTCAGTGGGGTCGACAATCTAACCCTAATGGTGGAATACACAGACTTTCCTGAAGCTAGTCCAGCTCGTAGTGCCCTGCTGGTGACCAAGCGGAAAGCCTCAGACACGGATGATGGGTGGCAGTTCAAGAAGTCACGGCTGGGAGGGATACAGAACAGACCCTCTAAAACAGATACCAATAGTAGTAACCAAGAACAAGCATCCACAGTGAGCAGCCCAGAAACAGATGAAGAGATTGAGAGAATGAAGGGTTCTGGTGAATATCCACAGTCTCCTACCTTCTGATTCTTTTGGGCCCAAAGGAGATTTTTGATTAGCTGAAGGGGAAAGCCAAATGTTTGTGTTTGTTTGTTTGTTTGTTTTACTGTGTTCAGCTCTTTGCAGTAACACATAGGGAAGTTCTAGTGCATTTATTTTATAAAATACTTTAAATTGAATCAGTCCAGAATTTGAGTACAGAACAAGCCTGGTAATGCAGTGTGTTTGGATCAGCACTTGTTCAGTTAGGTGAAAAAGCCCATTAGGTGGGACTCAAATGATACATATAAATAAATATGGATGATGTCTATCAGAGATTTCATTTTAACATAAAGCAGAAGTATATATTCATTTGTCAAACTTTTATAGGGCCAGGAACATTTTAATGGATGTATTGGAATTCCTGGGCTTCCCTGGTGGCTCAAATGATAAAGAATGTGCCTGCAGTACAAGAGACCTGGGTTCAGTCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAGAGTACCCATTCTAGTATTCTTGCCTGGAGAATTACATGCACAGAGAAGCCTGGCATTCTCCAGTCCATGGGGTCACAAAGAATTGAACACAACTGAGCAACTAACACTATTGGAGTTCCTATGTAAATCACACCCATTACTTATGTAAGTCCCAGTTTTAGATTCTTTAAAGAAATTTGCAAAGCAGCCTAAGTACAAAATGCTACTAGGGTTTTTCATTTCCCATTCCCAATCTTATTTGTCTTAACCATACCTGATTTGACTTTCTTAAAGCTAGTTGTCTTTAATCAGGTCTCAAAGCATTTTAGTTGGTTTTCATTTTAATAATAACTTCTTTTTAATGCTTGTATTCATCAGTACAAAAACAGAACTGACACAGGTCTGGGAACAAAAAAAATCTTGGTAATACAGATCTCAACAAATAAAAGAGAGTTGTAGGCTTCTTTGTGGTTTTTAAAGAGGATGTAAAGCCCGTGTTCGAGAAGGCAGTGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAAGAGTCGGGCACGACTGAGCGACTTCACTTTCATGCATTGGAGAAGGAAATGGCAGCCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGCGGAGCCTGGTGGGTTGCCATCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAAAGCCCCTGTTCAGTGAGTTGGTTAGTGGAGGTTGGTTAAGAGCACTCTTATGGTTTGGTTTTTGTATGTCTTTTCTGTAACAGAATTTCCCATGAAGACATATCACATGAAGCCTTCATGTTTTACTCTCTGGCTGAAATGCTGAACCCACACATTGACCATTGCTCTTCCATCAGTGACTCCTAAGTGATGGTTTTTCTATATTAGCTATGAATGTGCTGTCATCTTTTATTTATGTGCTAACATACATTAGTTGCTGTGGGGTGCTTATGGAATCCACATAGTACCTGGGATGATGTGTGCAAATCATGAGTTGCTGGGTTTGCTTTACTGGTTACATAAGAAGCGAAGGACAGAGGAAATAGGGTTCTGTCTGAACCCTAATTTTAAAATAAGCTTGATGTCCCATCCTTCAGGGAATGAAAAGGAGAAAAAGAATGCTTGTAAGACATTTTTTTCTCATTATTCTCTGTCATTTGGGGATTTGTTTGTATTACTGGAATGAGACATAGCACAGATGCCTATGGATCGGCTTATTTAGAGGACACTTCTAGTTTATGATAGACTAGTCCAGAGCTGAGTGTTGGGTCCTGTGATGGACTGCACCACTGTCCATCCCCAAGTGACATCTCTGCAGAGAGAAGACGCCTGGTCCTACTCAGGCTTATCTGCTTGTTAGGAAATCTTAACAATTTCAAACCTACACCCTGTCCTGTGGGATTTGTCCATGACGTAAGCATTCCACTGTCCTGCACCCATACTCTACAATCCTGTTTACAACACGGAGTCTGGGCATAAAGTCAAGTCCAGTGCAAGTCAGCCCTGCCGTGTGTGACATCGCATTGTCTGCAGTCTGTTGTATGAACTGTCTGGGGGGCCAGGTTTAAGTGAAGACCCCACAGTAACAATTTTTTAAGTGTATGTGTACGTTAAATGTAACAAGTGTTAACATTTTAAAATATATGTGTATGTAAATGTGACAAGTATTAACATTTTAAATAATCTGTTTTACCTAGTGAACATTCTGATATGAAGAGGAAGCTTCCCTCCTGAAACGCTTTCCTCATTATTCCAAATTACTATAAGAATTAAAAACTTAATACTTTATAGTTTGACAAGATTTAGCCTGTTAGTTTTTCTACTCAGTGGTTATTAAATCTTATAGTTTAAGTAGTTTGAGCCAGTATTAGCACCACACAACCACTTATTGCAAAATACATTTATTGATGATAACTTTATATAATTTACTCCCTATATCTGATATTACAAACTTTAGGGTCTTTGAGATAGGCAGGATCCTTGTATGTAACTGGCATAAACCCTGTGAAGAGAGAATGAAAGTTCTTCACAAAAGACAATGAGGAAAATCTTGTTTAGCATAATTCAGCTTTTCAGATGCTCTTACCCAATATTTGAGCTCTCTTAATTGCTTTTGTGATTTCTCTTTGTTTCTTCCCACAAAGACCTATAAAAGAAAATACTTTCTTATTCATAAAAAAATACCAATATTCAAAATGCATGACAATTAATGTCACAGAAGGACTGGAAAACTGTATAGAGCCTGAGAGTAAGTATCTTGGGCTTTGTGGGCCACACAGTCTCTGTCATCATCAATTCTGCTCTTGTAGCTCAGAAATTGTGGAAACTTAGCCATTTAGCAAGTGGCAGATCTGATTTGGCCTGCAGGCAGTAGGCCCCTGGTTTAAATGAGAGCCTGAGGATGACTACAACGTCTTCCCAAACAGCAAAGCCCGAGTTCTCTACATGTTGTCACCCTGTAGTTAACTGAGTATAAGAAGATATGCAAAATAATTACCCTTTTGGCCTCAGACGAGACTTTCTCAAAGTACCCATAGTTTTTGGTCTAATAGTAATTTGTGGCAATATTTGAAAATCTGCCAGTTTTTTTTTTGAATAACAGGAGTAGACATCTACATTTAAGTTGCTGTAATAGAAAACAAAATACCTGTTATGTGCCTTCCATAAATGCATCCAGTAAATGGAGAAATAAACTGGGATAAAAGCTGGTTTGAGGTATATTTGGAAAGGAAAAACATTTTATGTTAATACACTTGTTATTCAACCTTGTATAAATTTCAAAACACAAAACTTATATCACCTTCAAGCTATAAAAGGCTGATTAATAAATTTTAGACAAACTTCAAAAATATGAATAAAAACACTGAACTATGTTCATTCTATTTAAAATAACCAAAGTAATTGTGAAAATTAACATCTCTTCCTCAGTGTGTCAAAAAAAAGTCTATACAACAGATTAATGAGCATGTTCTTTCAGTGCTAAAACTGTTTTCTTCACTTTTCCACAGATAACTTTTCTAAACCACTGCTGCTTACAACAAGGTACAGAACATTCCATCTGTCGTGATTTTTTAGAGGCATAATATCAGACTACAGTGAGGTCTTCAAGATGTACAGGTGTATCAGGCCATTTGCTGCGAGTTTTTAAAGGTTAATCCTAACACTTGCATTTTACAGTTTCTTGGGCTTTCTCCCACCAAAGAAGCTATCACTGTATACTACTGTCAGTACACTTAACTCCGACACCATCTCCTCCCCCACATTTGCCACTTTTAATCTGCTGAGCGCTCGACCACAGATAAAATGAATTCAAAATAGCGATACTGGTGGTGAGGTAAGATATCAACTTCAACACAGGAGCTTTTCCCTAACTACTCAACCCCACCGACTGAGAATCACTGCCACAGGGAGCTACTGTTCAGAGGTTTGGGGCGAAGAAAAAACAAGACACACTGAGATGATTAAGAGTCAATGAAGGACAGCCCAGAGGTTCCGATTTGAATAAAACAGATGCCTTATCCACGCAAGTATAACCAGATTTGAAGTTACAAAGCTGCTGAAACAGTCACCCCTACACAAAGCCTATTATAAAAACTGACCTGCTTCTCTACTGTATTAATAAAAGAGCAAAAGTCCCAAATCAAGTATCACAGTGAAGTAAAACCAGATCTCACCTGTACATTCTTATAATCTACACGTTTTTCACACAAGATACATTTTTTCAGAGGCTCCTTGTAAGGATTTTCCATTGGAATAGGCTAGCATAAAGGAAAAAAAACAAAAATCTGAAAATGTTTTTTGTGTTAACTTTGAATCAAAATAATCTTAGGGTACCACATTTAAATCTCTCCAAGGGATTAGTTGTACCTTTCTTACTGTTAAAATGAATAAATAACAACAGTTTGGCTTACAAAAGAAAAGCAGTTATTTCTGAAAAAGACCATTTTAAAGTTTGAGAGTATTCATATATATTTTGTACAAGTATCTTGTTTTAGTTTGGCGAAGGAGGGATTAATTGACTGAGGACAATTCTGTGAAAAATACAATCTGGGGGGGAAAGGGTTTATCGGAGGCAAAAAAATCTTCAATAAGTGATTAAAAATGCTTTGCCCAGATTGTTAGGTGACTAAAAATCCTTATACTTAAGAAAAACAGCACAACAGATAACATATGCAATTCTTAAACTAGTATAGTATCTCTAAATCCATCCCTATATTTCTCTAGATGTTTTACTGATTATTTTTGTGTTACAAAAAGACAATGCCTCCATGTGTGTGCTAAGTTACTGCAATCATGTCCAACTCTTTGTGACCCATGGACTGTAGTCTGCAGGGCTCCTCTGCCCATGGGATTCTCCACGCAAGAATACTGGAGTGGGTTGCCATGTCCTCCTCCAGCGGGTCTTCCTGACCCAGGGATGGAACCCACATCTCTCTCTGTCTCCTGCACTGGCCGGCGGGTTCTTTGCCTCTGTCACCGCCTGGGAGGCCCAGTATGCCCACAGCCTACTGTAATACTACAAGTTTATTCTTTTACTGCAATTTTATAGTAGTGTAAAATTGTTTTATAACAATTTAAAACAG EMBV3_27952 GAGGTTTACCTAAAACCACACAGCGGGTGAGCTGCCCAGAAGAAATCAGAACCCAGGTCT Gene BVT0102_091751 + 0 NULL GK000002.2:131466405-131508855 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07702 TCCCGACCCGGCTCTCCAGAGAGAGAGGTGAAACGGAAGGTGGAGGTGGTTTCACCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41656 CGTTGTATTGACAACAATATTGATTTGCAGGAGAAAATTCAGATCCAGTTAACACAATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10634 AGAAGACATATCTGCCCGCCGTGGATGAGAAAATCAGGGACATATACAGCAAGAGCACGG Gene GeneID:618039|APOC2:NM_001102380:436_cdna Constitutive 0 NULL GeneID:618039 18 GENE APOC2 MGC165945 apolipoprotein C-II EMBV3_18310 CAGCATGAACATGGCCTCCTGGCTGTTTTTCTCTTAGTACAGTTCAAGGTGTAGCAAGTG Gene GeneID:540358|TPBG:XM_002690047:10_cdna Constitutive 0 NULL GeneID:540358 9 GENE TPBG NULL trophoblast glycoprotein EMBV3_42705 TGTTACACCCAGCGAGAACCTCTGCCACATGGATTGTCATGAACTGCTCAACCGCCATAT Gene GeneID:517880|SPACA5:NM_001040536:72_cdna Constitutive 0 NULL GeneID:517880 X GENE SPACA5 MGC133661 sperm acrosome associated 5 EMBV3_34287 TTGCCTGTCTTATCCAAGTGCCTTTCCTACAACGCTGAGTGGCACCGCCCTACATCCCAA Gene GeneID:513874|SPDYC:XM_002699389:378_cdna Constitutive 1 NULL GeneID:513874 29 GENE SPDYC NULL speedy homolog C (Xenopus laevis) EMBV3_10438 AAGCAGCACAGTGAAGGGCACCAGCTTTCCCGCTTTCACCTACTTACCAGTGAAATGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27464 TTACTTAGGACTGCATTTTGCTCTGTGAACTATCCCCTGCGCTTTGAACGTGCCAGCAGC Gene GeneID:519409|ORC5L:NM_001099704:126_cdna Constitutive 0 NULL GeneID:519409 4 GENE ORC5L NULL origin recognition complex, subunit 5-like (yeast) EMBV3_14200 CTGCCGGGGCACAGGGTCAAGGGTGAGTTTAAATTACTGCTCCCTCTACTTTCTCTACCT Gene GeneID:616622|PRR15L:NM_001034794:171_cdna Constitutive 0 NULL GeneID:616622 19 GENE PRR15L ATAD4 MGC127064 proline rich 15-like EMBV3_27115 AGCCTTTGCCCGTTACTCAGCTCTTATTAGACACCAGCGAATCCATACTGGAGAGAAACC Gene GeneID:100337238|LOC100337238:XM_002695328:42_cdna Constitutive 0 NULL GeneID:100337238 18 GENE LOC100337238 NULL zinc finger protein 347-like EMBV3_39211 GCCCTTCTGAACACGGCCATCAACTTCTTCCTCTATTGCTTCATCAGCAAGCGGTTCCGT Gene GeneID:540680|GPR139:XM_002697982:46_cdna Constitutive 0 NULL GeneID:540680 25 GENE GPR139 NULL G protein-coupled receptor 139 EMBV3_09149 AAATTTGGGGCTCAAGGATCACGACTTACTGGAGCAGGATGGGGAGGCTGCACAGTTTCA Gene GeneID:536133|GALK2:NM_001038170:92_cdna Constitutive 0 NULL GeneID:536133 10 GENE GALK2 MGC134356 galactokinase 2 EMBV3_07419 TTGTGTTGTTTTTGCACAGACTCCGGAAAAGTGAAGGCTGCCAATCCGAGTAGTACTCAG Gene GeneID:100139484|RAPGEF2:XM_002694421:41_cdna Constitutive 2 NULL GeneID:100139484 17 GENE RAPGEF2 NULL Rap guanine nucleotide exchange factor (GEF) 2 EMBV3_15938 TGGGGTGCCCAACTCTCAAGCTTCTCATAGGGGTCCTCAGCTTCTCTAGATGCAAAATGG Gene BVV0102_077601 + 0 NULL GK000016.2:53005547-53027477 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15354 TGGAGGAAGAGTCTTAGGTTGAATAAGTCTGAAGAGACATGACAGCTAAACGGATCCTGG Gene BVV0101_018246 + 0 NULL GK000016.2:39091108-39319531 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33930 CTCCAGCCGCTCCTGGGGAACACAGGGCATTCGGTTCTTGACCTTCTCTTAATGGAAATT Gene GeneID:539113|CHRNA6:XM_002698728:181_cdna Constitutive 0 NULL GeneID:539113 27 GENE CHRNA6 NULL cholinergic receptor, nicotinic, alpha 6 EMBV3_41004 AGCTCCGGGCTTTCTATTTTCGGTTTTGTGGGTTGTCCCAAGACAGAGTCAGAAGGTGCC Gene GeneID:782754|LOC782754:XM_002694410:8_cdna Constitutive 0 NULL GeneID:782754 17 GENE LOC782754 NULL similar to CG32263 CG32263-PA EMBV3_34956 GGGAGCCAGTTGGGTTCTCTTAATTAGTCTTGTGGGTTTTCTGTTTGGAAGGAGTCACGG Gene GeneID:617293|ELOVL5:NM_001046597:362_cdna UTR3_Alt 2 NULL GeneID:617293 23 GENE ELOVL5 MGC128086 ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) EMBV3_25404 TGTCCAATTCCACCAAGACCAGCCTGCTGCAGAAATTCGCTCTGGAGGTCTACTCATTCA Gene GeneID:514510|DNAJC16:NM_001101091:115_cdna UTR3_Alt 2 NULL GeneID:514510 16 GENE DNAJC16 NULL DnaJ (Hsp40) homolog, subfamily C, member 16 EMBV3_40379 TGTCCGGGGGCCACACGGGCCAATGGAGAGATCTTTGAAAACAAAGGAGCCATGATGGGC Variant GeneID:506997|GALT:NM_001035041:7_cdna 305^559 1 EMBV3_08130 GeneID:506997 8 GENE GALT NULL galactose-1-phosphate uridylyltransferase EMBV3_06665 CGGAAGAATCCTGAGTTCCGGGTGCAGTTTCAAGACGACCTGATCAGGGCCATCAAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07372 TTGGGGAAACTGAAGTCTGTGTCTGGGCACTTGGCCTTTGAGGAGTCTTTGGGTCTTCCT Gene BVV0102_086797 - 1 EMBV3_37386 GK000025.2:33729635-33749962 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03239 AATGATGAACCTTCTACGAGACAAAAGCCGTAACATCCAGTTTGAGGCCTTCCACGTTTT Gene GeneID:511451|CAB39:NM_001046087:94_cdna UTR3_Alt 2 NULL GeneID:511451 2 GENE CAB39 MGC137705 calcium binding protein 39 EMBV3_03982 TGAAAACCCCCAGAAATGTGAAAGGAGGTTTCCTACAGGATAACAGCATCTTCGGTTCAG Gene GeneID:516989|RALYL:NM_001077932:48_cdna Constitutive 2 NULL GeneID:516989 14 GENE RALYL MGC133552 MGC143116 RALY RNA binding protein-like EMBV3_28737 CAAGCCTGAGGAGAAGAAGCCTTGGAGAAAGCAGAGAGCAGCATGGACTAGATAAACGTC Gene GeneID:536537|RQCD1:NM_001101167:107_cdna UTR3_Alt 4 NULL GeneID:536537 2 GENE RQCD1 NULL RCD1 required for cell differentiation1 homolog (S. pombe) EMBV3_37217 CTCACATGAGCAGGTACAAAGGCTAAAAGAACAGGAAACAGAGTACGCTTGCTATCCAAC Gene GeneID:507166|KRCC1:NM_001075303:44_cdna Constitutive 0 NULL GeneID:507166 11 GENE KRCC1 MGC139387 lysine-rich coiled-coil 1 EMBV3_04663 CAATCCAGGCTTGTTACCTCTTGTAGAAACTTAAACCTGGCCAATGGCTGTGTGTAGATG Gene BVV0102_369528 + 0 NULL GK000021.2:49532180-49556509 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22955 TAAGCACTATCCTCTGTACTCCCTCAACGTGGCCTCCATGTGGCTGAAGCTAGGAAGACT Gene GeneID:615229|SMYD2:NM_001076364:114_cdna Constitutive 1 NULL GeneID:615229 16 GENE SMYD2 MGC143150 SET and MYND domain containing 2 EMBV3_15371 CTCGACATGGTATAATGGCTAAGAACATAGTTTCTGCAGGTTATACATCCCATCTCCTCC Gene GeneID:504925|CPSF7:XM_002699281:204_cdna Constitutive 0 NULL GeneID:504925 29 GENE CPSF7 FLJ12529 cleavage and polyadenylation specific factor 7, 59kDa EMBV3_03585 CGGGACGCAGGCAAATGCTGTAAGTCAATCCTCCCAGCAAACCCATAACATTACTTTCAC Gene BVV0102_273769 + 1 EMBV3_26915 GK000007.2:46027019-46035047 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37131 TCAAGAATTGAAGGAGAAGGTGGAGAATGGAAGTGAAACAGGGCCTCTGCCTCCAGAGCT Gene GeneID:281190|GGCX:NM_174066:5_cdna Constitutive 0 NULL GeneID:281190 11 GENE GGCX NULL gamma-glutamyl carboxylase EMBV3_22117 TTGCCAGGGGGGTGTGCGGGACCCTACTACTGAACTCCGGTTTTGATTTTGTGACTTTGA Gene GeneID:539742|PAK4:NM_001076184:712_cdna Constitutive 0 NULL GeneID:539742 18 GENE PAK4 MGC138047 p21 protein (Cdc42/Rac)-activated kinase 4 EMBV3_07523 GCTGGAACAGGGGTCTTTGGAGTGTGAAATAGTGAAAGAAATCTGGTGTGGCTGGGGCAA Gene BVT0102_044652 - 1 EMBV3_07586 GK000008.2:60332995-60368097 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225510 TCONS_00225513 TCONS_00225504 TCONS_00225516 TCONS_00225509 TCONS_00225505 TCONS_00225508 TCONS_00225514 TCONS_00225511 TCONS_00225506 TCONS_00225503 TCONS_00225507 TCONS_00225512 1 XLOC_137763 Coding TCONS_00225510 XLOC_137763 Coding Coding RGP1 8:60327756-60335113 j TSS168810 5091 1 TCONS_00225510_2 391 0.0394814378314673 10 0.309271343121262 0.00141307082203481 0.00107204410566373 0.000293336563696014 1.91098694702455e-35 1.75166505755621e-34 6.28295672328872e-05 0.000518609984572816 0.000745168095553902 0.000144009285487406 1.47026124416586e-22 0.000164841908768367 0.000107257648083618 6.06627315770541e-78 1.31530856943398e-12 4.65536533481087e-06 4.79912745477153e-06 3.74541904728878e-05 0.000379409500227562 6.66058029429602e-28 1.54253905347941e-159 3.98088006121855e-24 0.00047993044161141 0.000296366561114901 0.000106187250004311 0.00156141705071326 0.000306439627701193 5.76882124589925e-07 4.05975132958e-41 3.85644488217083e-05 3.24444301058019e-05 XM_005210116.1 RGP1 PREDICTED: Bos taurus RGP1 retrograde golgi transport homolog (S. cerevisiae) (RGP1), transcript variant X8, mRNA. 0.0 2590 100.00 0.281869966607739 NM_001080496.2 RGP1 Homo sapiens RGP1 retrograde golgi transport homolog (S. cerevisiae) (RGP1), mRNA. 0.0 2114 89.51 0.312315851502652 TCONS_00225510_2 sp|Q92546|RGP1_HUMAN RGP1_HUMAN Retrograde Golgi transport protein RGP1 homolog; 0.0 780 98.21 0.997442455242967 1 coding 0 1 1 1 0.123032844385629 0.355958273996831 0.0373149110164283 0.502991617987642 GAGCTGGTGTCTCCGTGCAACCAGGTAGCTGTTGCTGCTGCGGCGGCGGCGACAGCAATAAAGCCGCCACGGTCTCACCCTCGGTTGTCTCTCTGGGTCCTGGGCGGGAAGGATCGGGTCTCGACGTCATTGGGCCGCGGTGATTAGCTGGCCCGGCCAAAGGGCGACTGGGCCCACGGAGAGGGGAGGAGCCCCCGGGGCCGGCCCTCCAGGCACCGCCCCCGGGACCGGCCTGGGAGTTCGCCGCAGCCCAGGCCCCGTCCCCGGGCCGCGGCACCAGGCCCCCCAGCGGTGGGCGCCAGGTCCCGCCGGCCGGTGTCCGGGGCGGCGCCCGCGCCCGGGTACCAGCCCCTGGGAAGGTGACCCAGGGCGGCCGGCCCACCCAAGCCCCTTCCGGCCTAGCCAGCCCGGCGCTTCCGGCCGGAAGGGACTCGGAGGGAAGTCCCGCCTCTGCCGCGGCCGCAGCCACGCACTTGGCCCAGGCCCGGAGGGGCGGGCGGCCGAGGCCTTCGAGGCACCGGTGCCCGGTCAGCTGCCGCCGTACCTGCCTTCCGCCTTCCCGCACTCCAAACCTGGGCGCTTCCCTCTGACACCGTGATCCGATCCCGGAGCTGCCATGATTGAAGTGGTAGCAGAGCTGAGCAGAGGTCCTGTGTTTCTGGCAGGGGAGGCCCTGGAGTGTGTGGTTACAGTCACCAATCCCCTGCCCCCAACTGCCACTTCTGCATCCAGTGAGGCTCTGGCCTGGGCCAGTGCCCAAATCCACTGCCAGTTCCACGCCAGTGAGAGTCGAGTGGCACTTCCTCCCCCCGACTCCAGTCAGCCAGATGTCCAGCCTGAGAGCCAGACTGTCCTTCTTCCACACCGAGGTGAGAGAGGTCAATGTATCCTTTCCACTCCACCAAAAATCCTCTTCTGTGACCTGAGGCTAGACCCTGGAGAGTCCAAATCATACTCCTACAGCGAAGTGCTGCCTGTAGAGGGACCACCCTCGTTTCGGGGTCAGTCAGTCAAGTATGTCTACAAACTGACCATTGGCTGCCAGCGTGTCAACTCACCCATCACTTTACTGAGGGTCCCTCTGAGGGTTCTTGTGCTCACTGGCCTTCAAGATGTCCGGTTTCCCCAGGATGAGGCTGTAGCCCCATCCAGTCCATTCCTGGAGGAGGACGAAGGTGGGAAGAAGGATTCATGGCTCACCGAGCTGGCTGGGGAGCGCCTCATGGCTGCCACATCCTGCCGCAGCCTCCATCTGTACAACATCAGTGATGGCCGAGGAAAAGTTGGGACATTTGGCATCTTCAAATCTGTATACAGACTTGGCGAGGACGTGGTGGGGACCTTAAACTTAGGGGAAGGAACTGTAGCTTGTTTGCAGTTCTCAGTGAGCTTACAGACAGAGGAGCGTGTGCAGCCTGAGTACCAGCGGCGCCGCGGGGCAGGAGGTGCCCCCTCGGTGTCCCACATCACTCATGCCCGGCACCAGGAGTCCTGCCTACACACAACCAGAACCAGCTTCTCTCTCCCCATCCCTCTCAGTTCCACCCCAGGCTTCTGCACAGCCATTGTATCCTTGAAGTGGCGTTTGCATTTTGAGTTTGTCACCTCCCGAGAACCCGGTTTGGTGCTCCTACCTCCTGTGGAACAGCCTGAGCCCGCCACCTGGACGGGACCTGAGCAAGTGCCTGTGGACACCTTCAGCTGGGACCTGCCCATCAAGGTGCTGCCTACAAGCCCTACCCTGGCCTCCTACGCGGCCCCTGGCCCCAGCACCAGCACTATAACCATCTGAAACTGACCCACGTGGCACAGCCTTCTTCAGGATCCTGAGAACTCAGCCCCTGGGCTCTAGTAGGGCCCATTGTTCCCACCTGGGGTCCAGTGGCACAGATAATGAGAGACAGGCTTTCGGCTGGAGCGTTAACTTATTTATTCAGAATAAATCAGCAGCTGCTAGTGGTTTCCCTGGAAGTGGCAGCAGCAGTGGGCGGTCAGCAGAAGGGCAGTCAGTTGTGTTTAGCTGGAGTGGGGAGCAGGCGCCGCAGGCACAGGGGTGTTAGCTGAGCCCCACTCTGGGTCGGGCCCTCCCCCTTTGCAGGGCAGCCGAGGGTCAGATTTTTGCACGAGGGAGAACTGGCATGTTCCTGCCTCCTGGCGTACCTCACAGCCCGCAGGGAAGTCGATAGGATGCTGGGACCTGGGGAACCGAAGGATGGGGGAAGGGTCAAGACAGTGAAGGTCCACCTTTCTCCCTGCGCCTCATCCCCTCCCCAGCACTCCTCCCATGTCTCCCCAGTGCCCCCGGCCCTGCAGTATTTCTCTTGCCTGCCATATATGGATTTTTTTCATTTCATAGCAGGAGTACTTTCCCTCCAGATCCATCTAACTCCCCTCTCTCTGTAGCCTGAAGCCTCTCACACCTTCTTGTCGGTTCAGCCAGCCTCTTACTGCTACTCCGTTCGTTCTCACATCAGAGCAATCTAGTCACACCCTGGCCAGCTCTCAGTCCCTCATATCGGAGCCATTCTCTCTGGCCACCTTTGGTCACTCACGTATCACAGCAGCCCACACCGACCGGATGCAGACAGGTGCAGTGGAAGCAGTCCTTGCGGAGCCAAGACTCGCCCAGGGTGAAATATTTCCCCTCATAGTGGCAGGGGGCTGGGGAAGAACAGGAAATGTTAGAGCCAGAGTGGAGGAGTAAGGGCACGCTGCCCCTACGTGTGGTCTCTCCTCTGTCCCAGCTCCAGGGAGTCTGGGTTTGCTGCAACAGGACCACCTCTGAGCCCTTCCTCCCAGTGCCCTCTGCACCCATCCTTCCTTATGCCTCACCCAGTTTTACCTTGAGCCTGGAAGTAGCACTTGCTGTGGACTCCTGGGTGCTGGAGGAGCAGAGATACCACCAAGTAGATGACCCCCCAGCCTCCCCGAGTTCCCGCAGCCTGTCCCACCCAGGGTGTCCTTGGGGCCATTCCGGCAGCACAGCTCTTTCGGACCCTTCTTGGCTTCCGTTCAGGCTGCTCTGGCCTCGTCTTCCTTGGCTCTTCTCTGTTCCTCTCCTTGAGCCTTAGCTTCTGTCTCTCTCCCCTGGGCGCCTGTCTTACACCATCTCCGTGCCCTCTGTTCTCACAGGCTTGGGGATGTTTATAAAGTGAGGACCCTGGCCCCCTGCTGAGTGGAGCTGGAAAAGCCGTAACTCTGTTTCCTGAGGTGAGGGCATGAAAACAAGAGGTCTAGCTTTAACAAGCTGTGAGAGCTGATTCATGCCCCCGCACAGCCAGGGGGAGGAGGGTGGCCGGGGAAGGGGTACTGGACTGGGCACTTCCCCAGCAAGGAGGGGGTGGGGTGAGGGCCCCCAGGTGGTCCCCAGAACTCTCCCTGGCCTGGAGAGAAGGAAGCATTCCACCATCTCCCCCCGCCCCGTAATACACACACACACACACACACACACACACACTCTCTCCAGGGGTGTGTACGCTGGGATCCCTGCCTGGACCGGAGGGAGGCATTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGAGATGCAGTAGGGTGCGACGGCCAGAGGCTCCAGGAGAGCAAACAGGCACCTGGTGTGGAGGATGTTTCTCTCAGACCCCAGGGCAGGGTCTCCTTGCAGTGTCCTAGAGACATGGCTGCCCCTCAGAGGTTAGGGATGGGGGGCTGGGGGCAGGTGTCTCTTTTTTTTTACAGGCATCCCAGAGATAAGACTATCCATTGTTAATCACCCCAAACACACAGCAAATAAAAGATCTTGCCATATCTGGGAATGGTTCTTTTCAAAGAGGAACATCTCTAAGTGCCCTCACGGTATGGGTCATTCCAGTTTTCACAAGAGAGGCCCCTCTTTTCTCCTATGTTACGGAATGAGGATTTAGGAACGTATCCTCTGACATCCTCTTTTGGATTTCCTGTAGGTTGTGGAGAACCTGAAGAGAGGTGATTAAGAGCATAGGTTGTGGAGTCAGACTCTGGATTTAGATCCTAATTCTACTAAAAAGCTATGTGACATTGAGCAAGTTAGTTCACCTTTCTAAACCTGTTCCCTTATCTGTAAATTGGAATAGTGATACCAACTCATAAGACCATCAAGAGGATTCCATGAGATAATGCATGTCATGCTCCTAGCGCTGTGCCTGGCACATAGCCCTCTGGAAAGAGTAAACTGCTGTGGTCAGTGCTAGATGTTCCATTCTTTGAATGATGCAGAGGAGCCCTGTGTGCACGGCCCACAGCTTCTGTTGGGGCTGCTATAGATTTTTTTCACTTGCACACGTATGCTCCTTTCATCCTACTACTTCCTTCAAAAATTACCTCCAGGATGGTTTTGGTCCTTGTGTCTTTGAAACTCTAAATGTGCGCTTTGAGAACAGAGTTGCTGATCAGCCTCCTTTTCCTAGGTCAGAACCCTCACTTCTTCCCGGGAAGACATATCAAATCCTTCCAGCTAACTTTGGGACTCCTGCTTTTTCTCATAAGGTTTCTGAACCATTTCTTCCCATCCTCCTGTGAACTCTCAAGTTCTCCTTTCTGACAAGTCTAATGCTAGCCTTTGGTATTAATTGCCCCAGCCACACCAGATTTCTTTCACTATTTCACACTCCAAAGACCCCTGTTCCAGCTATCACTCTCCTACCAACAGGGTCAATCACTTTGGCACTTATTCTATTTTCCTTCTAAGTCTCCAGTGCCATTTACCCCTAGACTACCCCTCCCTGTAACCCAGTGGTTCCAATCCAACTACTTCTAGAGGACTACCCTCCCTCTCCCCTTGTCACCATTCAGAAACAGCTTCATCAGTCCTCCGAACTCCCTATCCTTTTCCAAGAAGACAGCTTACATGGCTGGAGATGAGGACTGTACCGCACCTTCACCCTAGTCAGGTCTGATATGCTTTCCATCTCAGGAGCAGCAAGAGGAAAAAAAAAATGGGAGCAGGGTGCCCTGATGTAGGCTGGCATGTGGGAGGCATGGCCTTGGAATTCTCTGGGCTGGAGCAGGTGGATTCAAAGGCTTGACCAACACAAGGGCCCAGAAATCCTGTCAGTGGCCAGTAGCTC EMBV3_20766 CAGAAAGCATCCACTGCATCAGGGTGGGTTACCTCCAGCACAGGTGTTCCTCTCAATTCT Gene GeneID:514521|TBC1D9B:NM_001101999:19_cdna Constitutive 0 NULL GeneID:514521 7 GENE TBC1D9B MGC179305 TBC1 domain family, member 9B (with GRAM domain) EMBV3_32710 ATGTACTGGCTACTCACACAGTAAGTGCAGGGTTGGCACCCGGGGATGTCGTTCTCATGA Gene GeneID:530799|CCDC141:XM_002685259:59_cdna Constitutive 0 NULL GeneID:530799 2 GENE CCDC141 NULL coiled-coil domain containing 141 EMBV3_08500 CTCAGTCATCATGGACCCAGAGTGTGACAGTTTCCCCAGCATCACTTCGGATGAGTCTTA Gene GeneID:786974|LOC786974:XM_002696262:44_cdna Constitutive 0 NULL GeneID:786974 20 GENE LOC786974 NULL similar to Beta-hexosaminidase beta chain precursor (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) (Hexosaminidase B) EMBV3_41548 TGCAGACTCCTGGAGACAACAGAAGATGCCTCAGAGTTGTTCTGCTTTTGAGAAGTGAGG Gene BVT0102_292700 + 1 EMBV3_30825 GK000026.2:15732398-15754392 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150180 TCONS_00150178 TCONS_00150177 1 XLOC_091822 NonCoding TCONS_00150180 XLOC_091822 NonCoding NonCoding - 26:15733167-15737304 - TSS112560 2347 1 TCONS_00150180_4 96 0.547933532168726 2 0.433027079303675 2.98453134553433e-11 3.2777165933086e-14 4.43669178022789e-05 3.07053724320916e-12 1.64397932877962e-27 3.55318014004932e-133 2.06649171893069e-15 2.27996026416172e-11 1.04333295013502e-18 1.44262980731457e-24 9.84641896146703e-30 2.74224890187297e-05 0 8.23166454586955e-09 6.31435066615464e-13 0.000877584636049845 2.7788279031863e-08 8.19787595988183e-14 2.04682433365318e-08 4.06883493968418e-25 0 0 0.000156893680068238 1.54294740770365e-14 1.17619662951067e-17 2.17098910382129e-09 1.21324325367124e-09 3.92705060021283e-14 2.94024024499182e-05 1.72964601075795e-18 XR_229907.1 LOC101902039 PREDICTED: Bos taurus uncharacterized LOC101902039 (LOC101902039), 0.0 2544 100.00 0.6003408606732 XR_248103.1 LOC101929151 PREDICTED: Homo sapiens uncharacterized LOC101929151 (LOC101929151), misc_RNA. 4e-29 134 69.94 0.148274392841926 0 noncoding 0 0 1 1 0.00775627091037237 0.94943162577344 -0.00251915239253121 0.959961673387734 GTCTGGCCTAGCAGTCCTGACCTAGAGAGGAAAAGCCGGTAGAAGCTCCAAAGAATCTGAGCTCCCTTGGCAGTCAAGAAGCACCAAGGACCCTGAGAGCAGTCTTCAACCAATGACACTTGAAAACTGAAGGATAAATACATATGCCAAGTGTGGTAGGCTGAAGAATATCCTCTGAAGATATCAGGCCCTGAAACTGGTGAATTTTGTGTTTTAGAGCCAAAGGTATGATTAAGGATCTTGAGATAGGGAGATGATTCTGGACTGTCCAGGTAGGCCCTAAATGCAATCACATGTATTCTTAGGGAAACTAGGCAGAGGGGGATTTCACGCAGATGGAAGAGGAGGAGACCTTGTGGCCACAGAAGCGGACAGTGCAGTGATGTAACCACAAGTCAAGGAGAGCCAGCAGCCACCAGAAGCAGGAAGAGGCAAGGAGCAGACTGTCCCGTGGAGCCTCTGGAGGCAGGATGGCCCTGCTGACTGCATGATTCCAGGGATACTGATTTCGAACTTTTGGCCTCTAGACCTGTGAGAGAATAAGTTTTCATTGTTTTCAGCTACCAAATTTGTGGCGATTGTCACAGTGACCACAGAACACTAATATACCAATATTTATACCCATAAGTACACCAATGTCCTCACTTCTCAAAAGCAGAACAACTCTGAGGCATCTTCTGTTGTCTCCAGGAGTCTGCAGCAGAGTTGAGCCCTACCTTTAGGGTTACCCACCCATCAGCCTACTCTGTTATTGACTTTCTCTTCTCAGTCTCGCTTGCTTATTCTTCCATCAGTGGTTCCAGGTCTCTCCTTCAATACAAACCACATACTCTCAAATCCTTCTGTATGAGTTTCTTGGAGTTGCTATAACAAAGTACCATAAACTGTGTGGCTTATAACAAAAAAAATTTATTCTCACAGTTCTGGAGGCCAGAAGTTGGAAATACAATAAAGGTGTTGATTCAGTTGGTTCCTCTTCAGGCCTCTGAGAAGTCTGTTTCATGCTTCTTTCCTAGCTTTTGGTGATGGCTGGCAATTCATGGCATTCTCTGGTTTGTAAATGCGTCTCTCCTATCTCTGCCTCCATCTTTACATAGCATTCTCCCCTGTCTCTGTGTCTTCATGTGGCCATCTTCCCCTCATGTAAGAACACTAGTTATATTGGATCAAGGACCCAGTTTCATGACATTATCACAACTTGGTAACATCTGTAAAGATCCTATGCCCAAATAAAGTCACATTTCTACATACTGGGGATAAGAATTATAACATCTTTTGTAAGGCACATACTTCAACTCATAACACCTTGACTCAGTGTCAAATATGGGGACCCCTAACCTAAGACAATTATCACTTAATAAGCATTTTTATTTCCAAAGCATAAGCATTTTTATTTCCCTAAATATAATTATTTTTCTTCAGTAATCTTATGATATTGTGTCTATTTCAAAGTTAATAAATCTGAGGATTAGATATTATGGTGTAGTCAAGTCTGTGTTTTACCAGGCAGGAAATGTAATAAGATGCCAGTTCTACCAGTGGGAGTGGTTTTCAGCAAAAGAGATCAAATACCTTAAGCTTTTTCTTTTTTCCCCCCCTCATCTGCAATATTATAGATCAGGAAACAAAGAGGGATTTTCCTAGGGTTGTGATAATCTTTTCTATTTGAGATTTTGTTGATAAATTTAATGTCTAAGACCTGATGTTTCCTCTTTCTTTACTTGAATTGTCTGTTCAGAGCCACTCTTGTTTATTCATTGCTTTCCAGAATCTTTGGGGAAGGGGGAGTAGACTCCACACACAAAGTCATGTCCAGTTTCTGATAATCCCTTTGGCAGCAATAGTTGCTCACTCTCTGTACCAGCCTCTGCTAGGAGCTCTCTGTGAAAGAGTGTTCTACAAAACAAGGACACATTGTCTCTGCCTCTATTCTAAAGCTGCTGGTAAGTACCCTGCACAGGGAAGAGACCATAAGATGAAACTAACATCTTAGATACCTTGTATATCACAATGTGCCCCGGCTTATTCTAATATTCTCTACTTCATCTTTCACCAAAGGCCAAGTCCTTTCTCTGATTACAAGTTTGGAAATACTTCCACTTACGGGCTTATCCACATATAGTCCCAAAACCTGCTTAGGTGGCATTTATGCTTCTGATTGCTTCCCTTCCTTTTATAAGCTGATACTGCTGATTATTATTTTTTTAATTATTTATTTGGCTGTACCCAGAGTTGTGGGCTTCCCAGGTGGCACTACTGGTAAAGAATCTGCCTGCCAGTGCCTGAGACTCAAGAGACCTGCATTCTATTCCTGGGTCAGGAAGATCCCCTGGAGAAGGAAATGGCA TCONS_00151549 r 5' 723 TCONS_00151549 r 5' 723 EMBV3_12031 TGATGACCGCGGGTGTGCTCATCACCTGCAAATGTCTGAAGAAATGAGGTCCCAGAAAGC Gene GeneID:100298356|LOC100298356:XM_002688576:275_cdna UTR3_Alt 3 NULL GeneID:100298356 7 GENE LOC100298356 NULL similar to bone marrow stromal cell antigen 2 EMBV3_05642 AGGAGGCAGAATCAGAAATGTGTTGAACCAGCTTCCACTACCGCATAAACTGCTCCCGCA Gene BVV0102_150142 + 0 NULL GK000009.2:68665599-68712246 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18846 CAGAGACTTCACACTGGAGAGAAAATGTGAGAGTGCTTAACTGGACAGCCCAAAGACCTG Gene GeneID:767896|ZFP2:NM_001098146:49_cdna Constitutive 0 NULL GeneID:767896 7 GENE ZFP2 NULL zinc finger protein 2 homolog (mouse) EMBV3_28725 CTTCGGATATCAAAAGCACAAAAGAGACGGTTGACAGCACTAAATCTGGGAAACAACCTT Variant GeneID:617064|OTUD6B:XM_002692846:235_cdna 371^745 2 EMBV3_21780 GeneID:617064 14 GENE OTUD6B NULL OTU domain containing 6B EMBV3_33095 AGGTGCTGTGTTGTCATGGTGAACTGAAGAACAACCGGGGCGTGAAACTACATGTTTTCC Gene GeneID:782247|ARHGEF3:XM_002697002:390_cdna UTR3_Alt 2 NULL GeneID:782247 22 GENE ARHGEF3 NULL Rho guanine nucleotide exchange factor (GEF) 3 EMBV3_04892 CAGAAGCTGGGCCATTAGGAAAGAGCCATGTGGAAATGCAAAGGGCAGTACAGAAGAACG Gene GeneID:504336|DAXX:NM_001075155:77_cdna Constitutive 0 NULL GeneID:504336 23 GENE DAXX MGC138055 death-domain associated protein EMBV3_13303 CAAGAGCTACCAGTACGAGGTGTGCTTGACGGGAGGCTGGGGGTTAAATGAGTTTAAATT Gene GeneID:616427|PCDHB2:XM_002689251:149_cdna Constitutive 0 NULL GeneID:616427 7 GENE PCDHB2 NULL protocadherin beta 2 EMBV3_18239 GTTTTGGCGGAACTACGGGGCAGGAAGATTGCACAAGTTAGGGGCGTTTACAATCGAGTG Gene BVV0102_105496 + 0 NULL GK000009.2:82634209-82761973 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236096 TCONS_00236097 1 XLOC_144375 Coding TCONS_00236097 XLOC_144375 Coding Coding UTRN 9:82755513-83320493 j TSS176796 13015 1 TCONS_00236097_18 3434 75 0.977096493851984 6.85517212408182e-23 5.38890660042405e-05 4.15092383777725e-40 2.84860887095235e-28 3.18115891125093e-19 2.03169188114382e-39 6.4152643278016e-40 1.33289197428319e-36 4.56732053177755e-47 7.66940374921596e-18 3.66743253856992e-18 1.48836196449334e-17 1.78867358759505e-29 1.81847241326887e-21 7.81384854886875e-22 0.00140577928108609 1.98046185113312e-28 5.12769178991829e-17 2.26757839335855e-35 1.8263103306735e-26 4.30061852008335e-17 0.000738906773955378 6.60207162163102e-05 3.68350929784747e-06 6.08370787740626e-05 7.9966426837303e-05 9.05516621102502e-26 4.72361442187831e-05 0.000126207430274124 3.41073684908269e-25 XM_005211005.1 UTRN PREDICTED: Bos taurus utrophin (UTRN), transcript variant X3, mRNA. 0.0 2.345e+04 100.00 0.998847483672685 XM_005267129.1 UTRN PREDICTED: Homo sapiens utrophin (UTRN), transcript variant X3, 0.0 1.631e+04 87.90 0.992086054552439 TCONS_00236097_18 sp|P46939|UTRO_HUMAN UTRO_HUMAN Utrophin; 0.0 6415 91.79 0.999708794408853 0 coding 1 1 1 1 -0.124832850908105 0.452588545276771 0.0470431032468078 0.528142877149408 CCTCGGAGGAGGGGAGCGGGCGGCCGCAGCGGCCCGCGGGCTTTCTCCCGCCGAGGGGCGAGGAGGAGCCTCCGGCTCCCGAAGCCGATTGGGGAATCTCGGGGAGCGGTGCCCCCCCACCCTCCGCCACCCTCCTTCGGGGTCATTTCTGCAGACGGAAAACTCTCCAGTGTTTGGCAAACTTGGTGCCTGTGCGCCCGTTCCAGGTTTGCACTGGGACTGTTTTGTTTTTGGCGGAACTACGGGGCAGGAAGATTGCACAAGTTAGGGGCGTTTACAATCGAGTGTCAAAAAGAAAAATTTTTTTTTCTTTCGGATCTGGTCTAGTTTTCCATATTTCCTTAAAAAAACAAAACAAACAAACCAAAAAAAAAATATATATATATATATACCGCACCACAAAGCCCACGTTTGCACACACACCGCGATTACTACGCCTGAAACACATCCGAGGAGGCCCGGGCCGGCTTGGGACTCGGCGGCGGCGGGCGGGCGAGGCAGCCCGCGGGGCATGGGAGCAGGTATTGATGTTGATAATTATAGAAAATTGAAAGTCTTTAAAAGAGGATCTTGTCAAGCCTTTGGATTACATTGAAACACAACTAAGATGGCCAAGTATGGAGAACACGAGGCCAGAGCAGACGATGGGCAGAATGAGTTCAGCGACATCATTAAGTCCAGATCTGATGAACACAATGATGTGCAGAAGAAAACCTTTACCAAATGGATAAATGCTCGATTTTCAAAGAGTGGAAAACCACCCATCAGTGATATGTTCACAGACCTCAAGGATGGAAGGAAGCTATTGGATCTTCTAGAAGGCCTCACTGGAACCTCACTGCCGAAAGAACGTGGCTCCACGAGGGTGCACGCTTTAAATAATGTCAACAGAGTGCTGCAGGTTTTACATCAGAATAATGTGGATTTAGTGAATATAGGAGGAACGGACATTGTAGATGGAAACCACAAACTGACTTTAGGATTACTTTGGAGCATCATTTTGCACTGGCAGGTGAAAGATGTCATGAAGGATATCATGTCAGACCTGCAGCAGACGAACAGCGAAAAGATCCTGCTGAGCTGGGTGCGCCAGTCCACAAGGCCATACAGTCAGGTCAACGTCCTCAACTTCACCACCAGCTGGACAGATGGGCTTGCCTTTAATGCCGTGCTCCACCGACATAAACCTGATCTCTTCAGCTGGGATAGAGTTGTCAAAATGTCCCCAACTGAGAGACTTGAACATGCCTTCAGCAAGGCTCAAACTTATTTGGGAATTGAAAAGCTATTAGATCCTGAAGATGTTGCTGTTCAGCTTCCTGACAAGAAATCCATAATTATGTATTTAACGTCTTTGTTTGAAGTGCTACCTCAGCAAGTCACTATAGATGCCATCCGTGAGGTAGAAACACTTCCAAGGAAATATAAGAAAGAATGTGAAGAAGGAGAAATTAACATACAGAGCTCGGCACCAGAGGAGGAGCAAGAGAGTCCCCGAGCTGAAACCCCCAGCACTGTCACGGAGGTTGATATGGATCTAGACACCTATCAGATAGCACTGGAGGAAGTGCTGACCTGGTTGCTTTCTGCCGAGGACACTTTTCAGGAGCAGGATGACATTTCTGATGATGTGGAAGAAGTCAAAGACCAGTTTGCAACCCATGAAGCTTTTATGATGGAACTGACGGCTCACCAGAGCAGCGTGGGGAACGTCTTGCAGGCAGGAAACCAACTGATAACACAAGGAACTCTGACAGATGAAGAGGAGTTTGAGATTCAGGAACAAATGTCCCTGCTGAATGCCAGATGGGAGGCGCTCAGGGTCGAAAGTATGGACAGACAGTCCCGGTTGCACGATGTCCTCATGGAACTCCAGAGGAAACAGCTACAGCAGCTGTCCGCCTGGTTAACGCTCACAGAAGAACGCATTCAAAAGATGGAAACTTGCCCCCTGGATGATGACTTAAAATCCCTGCAAAAGCTGCTGGAAGATCATAAAAGTTTGCAGAATGATCTTGAGGCTGAACAAGTGAAAGTGAATTCCCTGACTCACATGGTGGTGATTGTTGATGAAAACAGTGGCGAGAGTGCTACAGCTATTTTGGAAGATCAATTACAGAAACTCGGTGAACGCTGGACGGCTGTGTGCCGATGGACTGAAGAACGCTGGAATAGGTTACAGGAAATCAACATTTTGTGGCAGGAATTATTGGAAGAACAGTGCTTGTTGAAAGCATGGTTAACTGAAAAAGAAGAATCTTTAAATAAAGTCCAGACGAGCAACTTCAAAGACCAAAAGGAACTAAGCGTCAGTGTTCGACGACTGGCTATTTTGAAGGAAGACATGGAAATGAAGCGCCAAGCTTTGGATCAGCTGAGTGAGATTGGCCAGGATGTGGGTCAATTACTTGATAATCCTAAGACATCCAAGAAGATCAACAGGGACTCAGAGGAGCTGACTCAGAGGTGGGATTCCTTGGTTCAGAGATTAGAAGATTCCTCCAACCAGGTGACTCAGGCAGTTGCAAAGCTGGGAATGTCCCAGATTCCTCAGAAGGATCTTTTAGAGACGGTTCGCCTAAGAGAACAAGTAACTACAAAAAGGTCTAAGCAAGAGCTGCCTCCTCCTCCTCCCCCAAAGAAGAGACAGATCCCTGTGGATTTGGAAGCTAAAAAAAAGTTTGATGCTATAAGTGCTGAGCTGTTGAACTGGATCTTGAAATCAAAGACTGCCATTCAAGCCACAGAGATAAAAGAGTATAAGAAGATGCAAGAAACATCAGAAATGAAAAAGAAGTTGAAGGGATTAGAAAAAGAACAGATGGAAATAAAACCCCGACTGGATGAATTAAACCAAACTGGACAAATCCTTTTGGAGCAAATGGGAAAAGAAGGTCTTCCTACTGAAGAAGTAAAAAATATTTTAGAGAAGGTATTATTGGAATGGAAGAATATATCACAGCGTTTGGAAGATCAGGCAAGAAAAATACAGCTGCAGGAAGATATTAATGCTTATTTCAAGCATCTTGATGAGCTCGAAAAGACCATAAAGACAAAAGAAGAGTGGGTAAAACACACTGCCTCTTCAGAATCTCCCCAGGAGTCCTTGCCAAGCTTGAAGGACTCCTATCAGCGGGAGTTGACAAACCTCCGTAGCCTCCACCCCAGAATTGAAATGCTGCGTTCAAGCTGCTCAGCCTTGAAGTCTCGGCCTTTCGCCCCAGATTTTGTCCAGCAGGATTTAGAGAGCTTGGTGGGCCGGTACCAAGCCGTGCGACAGGGTTTAGAAGAGCGCCACCAACAGGTCGAGAACGAACTGAAGAGCCGACCTGGACGTGCGTATTTGGAAACATTGAAAACACTGACAGATCTGCTAAAGGACTCTGAAAGTAAGGCCCAGATGTCTTTGAATGTCTTGAATGATCTGGCAAAGGTGGAGAAGGCCCTCCAAGAAAAAAAGGCTCTTGATGAAATCCTGGTGAATCAAAAACCTACCTTACATAAACTTGCAGAAGAAACAAAGGCTTTGGAGAAAAATGTTTCTCCAGATATAGAAAAAACATATAAGCAAGAATTTGATGATGTTCAAGGAAAGTGGAACAAACTGAAGGTCAAGGTTTCCAAAGATCTGCATTTGCTTGAAGAAATTACCCCCAAACTCAGAACTTTTGAGGCTGATTCGAAAGTCATTGAGAAGTGGATGGATGGTGTGAAAGACTTCTTAATGAAAGAGCAGGCTGTCCAAGGAGATGCCGAAGGGCTCCAAAGACAGCTTGACCAATGCTCTGCATTTGTTAACGAAATAGAAACAATCGAATCATCTCTGAAAGACATGAAAGAAATAGAGGCTAACCTTCGAAGCTGTCCAGTTGCTGGAATCAAAGCCTGGATGCAAACAAAACTAGTTGACTGCCAATCACAACTGGAGAAATTTAGCAAGGAGATTGCTATTAAAAAAAATAGGTTGTCGGAAAGTCAGGAAAAAGTGGTGAACCTGAAAAAAGACTTGGCGGAGATGCAGGAATGGATGACCCAGGCAGAAGAGGACTACCTGGAGAGGGACTTTGAATACAAGTCACCAGAAGAACTTGAGAGTGCTGTGGAAGAAATGAAGAGGGCGAAAGAGGACGTGCTGCAGAAGGAGGTGCGAGTGAAGATTCTCAAGGACAGCATCAAGTTACTAGCTGCAAAAGTGCCCTCTGGTGGCCAGGAGCTGACATCTGAGCTGAATGTCGTGCTGGAGAATTACCAACTTCTTTGTAATAGAATTCGAGGAAAGTGCCACACCCTGGAGGAGGTATGGTCTTGCTGGATTGAACTGCTTCACTATTTGGATCTTGAGACCACCTGGCTAAACACTTTGGAAGAGCGCATGAAGAGCACAGAAGCCCTGCCTGAGAAGACAGAAGCTGTCAGCGAAGCCCTGGAGTCTTTAGAATCTGTTTTGCGACATCCAGCAGACAATCGCACCCAGATTCGGGAACTTGGCCAGACTCTGATTGATGGAGGAATCCTTGATGACATAATCAGTGAGAAACTGGAGGCTTTCAACAGTCGATATGAAGATCTCAGTCACCTGGCAGAGAGCAAGCAGATTTCTTTGGAAAAGCAGCTCCAGGTCCTGCGGGAAACTGACCACATGCTTCAGGTCTTGCAGGAGAGCTTAGGGGAGCTGGACAAGCAGCTCACAACGTACTTGACTGACAGGGTAGATGCCTTCCAAGTTCCTCAAGAAGCCCAGAAAATCCAAGCAGAGATCTCAGCCCATGAGCTGACTCTAGAGGAGTTAAGAAGAAATACGAGGTCTCCACCCCAGACCTCCCCAGAGGGCCGGACTGCCAGGGGAGGAAGTCAGATGGATGTGCTGCAGAGGAAACTTCGAGAGGTGTCCACAAAGTTCCAGCTTTTCCAGAAGCCTGCTAACTTTGAACAGCGCATGCTTGACTGCAAGCGCGTGCTTGATGGTGTGAAAGCGGAGCTGCATGTTCTGGACGTGAGGGATGTGGACCCTGATGTCATACAGACCCACCTGGACAAGTGTATGAAACTCTATAAAATTTTGAGTGAAGTCAAGCTTGAAGTGGAGACTGTAATCAAAACAGGAAGGCACATTGTCCAGAAGCAGCAAACCGACAACCCTAAGGGGATGGATGAGCAGCTGACTTCTCTGAAGGTTCTCTACAATGACCTGGGTGCCCAGGTGACAGAGGGGAAACAGGATCTGGAAAGAGCATCCCAGTTGGCTCGGAAGATGAAGAAAGAGGCTGCTTCTCTCTCTGAATGGCTTTCTGTTACCGAAACAGAATTGGTACAGAAGTCCACTTCAGAAACTTTGCTTGGTGATTTGGATACAGAAATTTCCTGGGCTAAAAATATTCTGAAGGATCTGGAAAAAAGAAAAGCTGATTTGAACAGCATCACAGAGAGCAGTGCTGCCCTACGGAACTTGATTGAGGGCAGCGAGGCCGTCTTGGAAGAGAAGCTCTGTGTGCTTAGTGCTGGCTGGAGCCGGGTTCGCACCTGGGCTGAGGATTGGTGCAGCACCCTGATGAACCATCAGAACCAGTTGGAAATATTTGATGGAAATGTTGCCCACATAAGCACCTGGCTTTATCAAGCTGAAGCACTATTGGATGAGATCGAAAAGAAGCCAGCAAGCAAACGGGAAGAAATTGTGAAGCGTTTACTCTCTGAGATGGATGATGTCAATCTCCAAGTACAAAATGTCCGAGATCAAGCTGTTGTTTTGATGAATGCACGTGGAGGCTCAAGCCGGGAGCTTGTAGAACCAAAATTAGCTGAATTGAACAGAAATTTTGAAAAGGTCTCTCAACACATCAGAAGTGCCAAATTGCTAATTGGCCAGGAACCGTTATCATATCCGTGTCTGGTCACCAGTGAAGCATTTGAAGTTGGTGTGCCTTTCTCTGACTTGGAAAAATTAGAAAGTGACATAGATAATATGTTAAAGGTTATGGAAAAACACTTGGAATCCAGTGATGAAGATGAAAAGATGGATGAGGAGAGAGCCCAGATTGAGGAAGTTCTACAAAGAGGAGAACAAATGTTGCATCAACCTATGGAAGATACTAAAAAAGAAAAGATCCGTTTGCAGTTACTACTTTTGCACACAAGATACAACAAAGCTAAGGCAGTCCCTATTCAACAGAGAACAAGTCAGCTCGGTTCTGGAATTAGATCACCACCCCTTCCCACAGATTATCTGGTTGAAATTAACAAAGTTTTACTTTCCATGGATGATGTTGAATTATCACTTAATGCTCCAGAGCTAAGCTCTGTTGTCTATGAAGAATTCTCATTTCAGGAAGATTCTCTGAAGAATATCAAAGATCAATTGGACAAACTCGGAGAGCAGATTGCAGTCATTCATGAAAAACAACCGGATGTTATCCTCGAAGCTTCTGGACCTGAAGCCATTCAGATTCGGGATACACTTACTCAGTTGAATGCAAAATGGGATAGAATTAATAGAATGTACAATGATCGTAAAGGTTATTTTGATAGGGCTGTGGAGGAATGGAGACAGTTCCACTGTGACCTTAATGACCTCACACACTGGATAACAGAAGCTGAAGAGTTACTGGCTGGTACTTTTGCTCCGGATGGTGGCCTGGACTTAGAGAAGGCCAGGATACATCAGCAGGAACTCGAGGAGGGGATCAGCAGCCACCAGCCGAGTTTTGCAGCACTAAACAGAACGGGGGATGGGATTATACAGAAACTCTCCCCGACAGATGGAAGCTTCTTGAAGGACAAGCTGGCAGGTTTAAACCAACGCTGGGGTGCAATCACTGCAGAAGTGAAGGATCGGCGACCAAGGTTGAAAGGAGAAAGTAAGCAGGTGATGGACTATAGAAAAAGACTAGATGAGATTATCTGTTGGTTAACAAAGGCTGAGAATGTTGTACAAAAAAGATCAACCACTGAACTGGAAGAAAACCTGCAAGAATTAACAGACTTAACCCAGGAGATGGATGTACAAGCTGAGAAACTCAAGTGGTTGAATAGAACTGAATTGGAAATGCTTTCAGATAAAAGTCTGAGTTTACATGAAAGAGAAAAAGTTTCAGAGAGCTTAAGAACTGTAAATTCGTCATGGAATAAGATATGCAGAGAAGTGCCTGGTGTGCTGAAGGAACGCTTCCAGGATCCCTGTTCCGTTGCTCAGATGAGAATTGCTGCTCATCCCAGTGTCCAAAAGGTGGTGCTAGCATCATCTGCATCAGATATTCCTGTCCCATCTCCTCGTGCTTCAGAAATTTCAGTTCCTGCGGATCTGGATAAGACGATAACAGAACTAGCCGACTGGCTGGTATTGATCGACCAGATGCTGAAGTCCAACATTGTCACTGTCGGGGATGTAGAAGAGATCAATAAGACAATTTCGCGAATGAAAATCACAAAGGCTGACTTAGAACAGCGCCATCCTCAGCTCGATTATGTCTTTACATTGGCGCAGAATCTGAAAAATAAAGCTTCCAGTTCAGATGTGAGAACAGCAATCACTGAAAAATTGGAAAAGGTCAAGAACCAGTGGGATAACACCCAGCACGGTGTGGAGTTAAGACGGCAGCAGCTGGAGGACATGATTATTGACAGTCTCCAGTGGGATGACCACAGGGAGGAGACTGAAGAGCTCATGAGAAAGTATGAGGCTCGCCTCTATATTCTTCAACAGGCTCGAAGGGATCCACTTGTCAAACAGATTTCTGATAGTCAAATGCTGCTTCAAGAACTGGCTGCTGGAGATGGTGTTGTAATGGCATTCGATAATGTCCTGCAGAAACTGCTGGAAGAATATGGCAGTGATGACACAAGAAATGTGAAAGAAACCACGGAGTACTTAAAAACATCATGGATCAATCTAAAACAAAGCATTGCTGATAGACAGAGTGCCTTGGAGGCTGAGCTAAGGACAGTGCAAAGCTCTCGCAAGGATCTGGAGAACTTCCTAAAGTGGATACAAGAAGCAGAAACCACAGTTAATGTGCTTGCAGATGCCTCTCAGCGGGAGAATGCTCTTCAGGACACTGTCCTGGCCAGAGAACTCACACAGCAGATGCAGGACATCCAGGCGGAAATTGATGCCCACAATGACATATTTAAAAGCATTGATGGAAACAGGCAGAAGATGGTAAAAGCTTTGGGAAATTCTGAAGAGGCAACTATGCTTCAGCATCGATTGGATGATATGAACCAAAGATGGAATGACTTAAAAGCAAAATCTGCCAGCATCAGGGCTCATTTGGAGGCCAGTGCTGAGAAATGGAACAGATTGCTGACGTCTTTAGAAGAACTGATCAAATGGCTGAATATGAAAGATGAAGAGCTTAAGAAACAAATGCCTGTTGGAGGGGATGTCCCAGCCTTACAGCTCCAATATGATCACTGTAAAGCACTGAGACGTGAGTTAAAGGAGAAAGAGTATTCTGTCCTGAATGCTATAGACCAAGCTCGAGTTTTCCTGGCCGATCAGCCAATTGAGGCCCCTGAAGAACCAAGAAGAAACCTACAATCAAAAACAGAATTGACTCCTGAGGAGAAAGCCCAAAAGATTGCCAAAGCCATGCGCAAGCAGTCTTCTGAAGTCAAAGAGAAGTGGGAAACTCTAAATGCTGTTACTAGCAGTTGGCAAAAGCAAGTGGACAAGGCGTTGGAAAAGCTCAGAGACCTGCAGGGAGCGATGGATGACTTGGATGCTGACCTGAAGGAGGCAGAGGCTGTGCGGAATGGCTGGAAGCCCGTGGGAGACTTGCTCATTGACTCACTTCAGGACCACATTGAGAAAACCATGGCATTTAGAGAAGAAATTGCACCAATCAACTTAAAAGTTAAAACAATGAATGATTTATCCAGTCAATTGTCTCCTCTTGACTTGCACCCGTCTCTAAAGATGTCTCGCCAGCTCGATGACCTTAATATGCGATGGAAACTTTTGCAGGTGTCCGTTGATGATCGCCTTAAACAGCTTCAGGAAGCCCATAGGGATTTTGGACCATCCTCTCAGCATTTTCTCTCTACTTCAGTCCAGCTGCCGTGGCAAAGATCCATTTCACATAATAAAGTGCCCTATTACATCAATCATCAAACACAGACAACCTGTTGGGATCATCCTAAAATGACCGAACTCTTTCAATCCCTTGCTGACCTGAATAACGTACGTTTCTCTGCCTACCGTACAGCCATCAAAATCCGAAGACTCCAAAAAGCACTATGTTTGGATCTCTTAGAGTTGAATACAACAAATGAAGTTTTCGAACAGCACAAACTGAACCAAAATGATCAGCTTCTTAGTGTTCCAGATGTCATTAACTGTCTGACAACAACTTATGATGGCCTTGAACAAATGCATAAGAATCTGGTCAACGTTCCTCTCTGTGTGGATATGTGTCTCAACTGGCTACTCAATGTATATGATACGGGCCGGACTGGAAAAATAAGAGTGCAGAGTCTGAAGATTGGATTGATTGCTCTCTCCAAAGGCCTGTTAGAAGAAAAATACAGATATCTCTTTAAGGAAGTGGCAGGGCCCACGGAGATGTGTGACCAGAGACAGCTGGGCCTGTTACTGCACGATGCAATCCAGATCCCTCGGCAGCTGGGGGAGGTAGCAGCCTTCGGGGGCAGTAATATTGAGCCCAGCGTTCGCAGCTGCTTCCAACAGAATAACAACAAGCCAGAGATAAGTGTGAAGGAGTTTATAGATTGGATGCGTCTGGAGCCACAGTCCATGGTTTGGCTGCCGGTTCTACATCGCGTGGCAGCAGCTGAGACTGCAAAACATCAGGCCAAATGCAACATCTGTAAAGAATGTCCAATTGTTGGATTCAGGTATAGAAGCCTGAAGCATTTTAACTATGATGTTTGCCAGAGTTGCTTTTTTTCGGGTCGAACAGCGAAAGGTCACAAATTGCATTACCCAATGGTGGAATATTGTATACCTACAACATCTGGGGAAGATGTACGGGACTTCACAAAGGTGCTGAAGAATAAGTTCAGATCGAAGAAATACTTTGCCAAGCATCCTCGGCTTGGCTACCTGCCTGTCCAGACAGTTCTTGAAGGTGACAACTTAGAGACTCCTATCACACTCATCAGTATGTGGCCGGAGCACTATGACCCTTCGCAGTCTCCTCAGCTGTTTCATGATGATACCCATTCAAGAATAGAACAGTATGCTACACGACTGGCCCAAATGGAAAGGACTAATGGATCTTTCCTCACTGATAGCAGCTCTACCACAGGAAGTGTGGAGGACGAGCATGCTCTCATCCAGCAGTACTGCCAGACGCTCGGAGGGGAGTCCCCAGTGAGCCAGCCCCAGAGTCCAGCGCAGATCCTGAAGTCAGTAGAAAGGGAAGAACGTGGAGAACTGGAGCGGATCATTGCCGACCTGGAGGAAGAACAAAGAAATCTGCAGGTGGAATATGAGCAGCTGAAAGAGCAGCACTTGAGAAGGGGCCTCCCTGTCGGCTCCCCTCCAGACTCTGTTGTGTCCCCTCATCACACGTCTGAGGATTCAGAACTTATAGCAGAGGCGAAACTCCTCAGGCAGCACAAAGGTCGGCTGGAGGCCAGGATGCAGATTTTAGAAGATCACAACAAGCAGCTGGAGTCTCAGCTCCACCGACTTCGGCAGCTGCTAGAGCAGCCTGAATCTGATTCGCAAATCAATGGCGTCTCCCCTTGGGCTTCCCCTCAGCAGTCGGCACTGAACTACTCCCTGGATCCAGACCCGGGCCCGCAGTTCCACCAGGCAGGCACGGCGGCAGAGGAGTCGCTGGCACCCCCTCATGACACCAGCACGGACCTCACAGAGGTCATGGAGCAGATCAACAGTACGTTTCCATCCTGTTGCCCAAATCTCCCCAGCAGGCCACAGGCAATGTGAAGTATTCATCTAGCCAACCAACATTTCTTGATTTACAGTGTTGCCCTTTTCAGCAAATGCCAGTGTCAAGTTCCATTTAATCAGAAGCTCCATGGCTCTTTGAATTATGCTGTTGAGTGCTGACTGTGTGTTCTACTGAAGGAGTAAAACACTGACTATCCAAAGAGGAAAGGATATTTTGTTTTTATAATAATCATATGTTATTGTTTTCTTCTTCCCTTTCTATGCAACTGTAAATTAATGAACAGAATGGTATTTGGAAATGGAAATACATTTGTCACTGATTTGTATACTGTATACAGTATTGGGAAAGTGGGTGGGGGGTTTCTAATATGAGACCTTCTTTTTAATAACCGTGAACAAATGCATCAGAATTAGAAGACAATTTTACATTTTTACATTCCTTCATATTAACCTTGTACAATAACTTCATTTGTTTCTTTGACTCTTTTACCATTATGTTTTGGTTATTTATAATTCATAAGCCACATGACCAAATAGATTTTATTTGTTTCCATGATTTGGCCAAATTAATAACTTCATATATGTCAATCAAATATTATATGTTTATGGATTAGGCTACAGCTCTGTGTATACTATTTAACTTTACTTCACATCATACACTTATTTCTTTAGTGACCACTTGGATAACCGCAATAAAAATCCTGTGGGCCTAACAGGCATTTCTATTGGGATTTTTTTCCCCTTGTCTTTTATCTCCCTGCTCTATATAAGTTGGTGTTGATTTCTTTATTTATTTTATGTCCCAATCTGTATGACAGAATTATAATAATCTCAAAGATTATTTTACCAAAGGTTGCCCATTTAAGCATATTTTCATTTTGACACAGAAACAAGATTTGGTCCAACTTTTCCTAGTTCCCAGGTCTTGATTTTCATCATTCAGTACACAGCAGACCTGTACCTAATTGTGATACCAAAATCCATGGCTGTCTTTAGTTCCCTTTGAAGAAATTTTGATGGTTGTTTATGTCTCTAATATATTCAAGCCCTCAATGATTCTTGAAACCCCCGGTTATTTTCCTTCTGAAAGCAGACACAAATTTAATGAATGTCTCATTTTACTTTTTGAAGGAATAGCTTGTTATATTACCCTTCATTTGACCAATGCATTTGGGAACGATGTTTATCAAAAGCCTGTATCACTGCTTCTATAGAAGAATGAAATTAATGCTTAGATGGTGGAATCCTGGCTTACACCTTTGAGTGCATTCAGTTAGGTATTTGGTTCAGCTCCTGATTTAACATTTATTTGGTTCAGTTTAAACATGCCATGTCATTTACCAAATGTAAAGAAACCAAAAAAAAAAAAAAGTAAAAATAATGTGTTTTGATTGAAGCATATGTGCTTTAAAACATCAGGACATTTTAACTTTGAGTTCTCTTTAACTGGGATCTGGCCAGAAGGAGGCTTAAAGTTAGAAATTCCTATTCTTTAGAATAGGTTGGGTGGGTTGGGGGGCAAGGGTGTCTATTTGCAGTAAAGATATTTTGAGAAGAAGAAAATTGTTTTATATAAGAGGAAAGCCATGACCACCTTTCTACCTCAGATCCATCTTCATCCATCGCGTTGGAAATAGCTTTATGCCGCTGCAGTTTGAAAAATCTAGAGCTTCTATCAGATCACATCATACCCAGTAAAAATACCTATTTAAAGAAAAAAAAATTCCCTGAACTCTGAACTACAAGTTGTAGATTTGGTGTCTTCCTTGTCCTTCCTTTGAAAAGTTATGTATTAATTTTTTTTCTGCCTGTAATTGTGTGCAACATGTTCTCTATCTGCTATTAAGGAAAAGCTACATAAAACACTACATTGTAACCTTTTAAGTAACGGTAAATATAAAGAAATATATTGCAGTAACAAGGGGAAATAAGTATGTAGTTCTTTTGAAATATGTGGTAAAGAACTAATCATAGACTATCATCTAAACTGGTTACATGTTGTATTTTTCATCCTGAATAAAAGTAATTTTAACACAAGGTGACTTTGATATTCTTCAGTGGTGTTTACTGATAGACTTAGAACTTTGAATGTATGATTATGAAAATAAAATAGAAAGACAGCCTATATCCTGATAATCT EMBV3_07384 AGAGCTCTGACTCCTGCGATGGTGATAGTGGTCTGCAGTCCGGGCGCTCTGGCTGTGGCC Gene GeneID:786044|LOC786044:XM_002686032:210_cdna Constitutive 0 NULL GeneID:786044 3 GENE LOC786044 NULL hypothetical LOC786044 EMBV3_00356 GCGCCTGAGCCCAAAGAGGAAGGCTCTGCCCCATGCGTGAGCGGGAGGAGCAGCGGGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36395 TCCTGGCTCACCTGCGGTATGGATTACTAGTTTAGAACTTGTGGTTGAGCCATGGATTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40396 GGCGAAGCTGGCGGAGCAGGAGGATGGGCGAGCAGTCTGAATGCCAGAATGGATAACCGT Variant GeneID:515537|CLDND1:XM_002684702:18_cdna 64^129 1 EMBV3_23850 GeneID:515537 1 GENE CLDND1 NULL claudin domain containing 1 EMBV3_15944 CTCAACAAGCGAGTAGAAGCTATGAAGCAGGAATTACAAGCACATGTTGACCAGATAACT Variant GeneID:532881|FGFR1OP2:NM_001102147:14_cdna 437^697 4 EMBV3_10704 GeneID:532881 5 GENE FGFR1OP2 MGC143105 FGFR1 oncogene partner 2 EMBV3_22450 GCGGACTGCTGCCGAGTCACCAGATGTTCCAACTACCTAGCCTCTGTTACAAAACTTCCT Gene BVV0101_059991 + 0 NULL GK000006.2:109845616-109868778 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210908 1 XLOC_129418 NonCoding TCONS_00210908 XLOC_129418 NonCoding NonCoding - 6:109846553-109846831 - TSS158415 278 1 TCONS_00210908_1 44 0.546762589928058 1 0 0 0 0 0 0 0 0.000125864177223339 0 0 0 0 0 0 0.00116753387739753 0 0.000570034105871559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005199692.1 LOC101909020 PREDICTED: Bos taurus arginine-glutamic acid dipeptide repeats protein-like (LOC101909020), mRNA. 5e-30 134 79.49 0.550359712230216 0 noncoding 0 0 0 0 0.0804673573045535 0.720056779977077 -0.0353835137919878 0.608875380792706 CTGGGGGCAGAGGGTCAGGGAGCCCGGGCTGTGGAGAGGTCAGGGGGTCAATCACGCCCTTCCCATCAGGGCCAGCTGACCTCGGGCTCGCCTGCATTGCGGGCGGACTGCTGCCGAGTCACCAGATGTTCCAACTACCTAGCCTCTGTTACAAAACTTCCTGTGTATCCTGGCTCCTCCCTTATCTCTTGAGAGCAGTCTCAGGGTTAGCTGAGATGCTGTGTCCTGGACTTAAGTCCTCAGTTTTGTCTACCAAATAAAACATAACTTTCAAGTTG TCONS_00206279 . 5' 936 TCONS_00206279 . 5' 936 EMBV3_37704 TCAACACGTACACCGTGGATGATCTCCTCCCTGGCACAAAATACGAGATTTGCCTTAGCC Gene GeneID:519820|LRIT2:XM_002698934:183_cdna Constitutive 0 NULL GeneID:519820 28 GENE LRIT2 NULL leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 EMBV3_38450 CCACAGAGAGATGAGTGCAGGGTCACTGGTTCTTGCTGACTCATGGCAAATGGACAGAGT Gene BVV0102_221608 - 0 NULL GK000009.2:43524277-43793888 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235344 TCONS_00235354 1 XLOC_144216 Coding TCONS_00235354 XLOC_144216 NonCoding Coding - 9:43504712-43669445 - TSS176438 2007 3 TCONS_00235354_6 76 0.0528151469855506 3 0.987834786198189 5.44026640991048e-07 0.000402173889386503 2.01595275950628e-17 0.000153090288807191 0.000172199241664476 5.0757196229013e-05 0.000306380292644085 0.000246503544229263 0.000868818385580717 0 0 0 2.00149333112932e-05 3.04692772662338e-05 8.17265212353612e-09 0 0 0 0.000215572422769519 0.000488019484922716 0.000396526770882665 0 0 0 0.000563052620796509 0.000408124236692177 0.000100186955033205 0 7.25652248760768e-06 0 XM_005198818.1 ANKLE1 PREDICTED: Bos taurus ankyrin repeat and LEM domain containing 1 (ANKLE1), transcript variant X1, mRNA. 4e-35 154 87.80 0.0607872446437469 0 noncoding 1 1 1 1 0.0327887044740328 0.772834609868251 0.043085973494382 0.409533386307539 GAGATGAAGCAACACTAAAGATGGACTGAAGTCGGGGTGAAGAATGATTGGACTTGGCGTTGGGTGCAGAAAACGGATGACGCAGGGATGGCACTCGGACTCCTGGCTCTGATAACCAGTCCTTCAAAAATGGACTTCATTCTGGAGTTGTGGTGGGCAACCTGCATCCCGGGGGCCCTGAGAAGAGACTCTGTCCATTTGCCATGAGTCAGCAAGAACCAGTGACCCTGCACTCATCTCTCTGTGGCAGGCTTGGATGGCCCTGCTCAGTCAGGCCATGCTCCTACAGGCTTCCCTGGACAATTTCTCTCCCACCGTTTTAGTTGAATTGAGTGTCCACGTGTCAGTTGTTATTCAGTGAATCATGTGGTTTATAGATGTAGAGCTATCGTTTGAATCTAGAATGCCTTTCCTCTCCACCTCAATAGCCCATGTGATCTGTATGCTTCTCTTCAGCTCCCTTCCTTTTCGAGAAAGGTGATTAAAAGAATACTTCTTGAGAAGGAGGTGGCTGGAGCAAGCTCTTCACAGCTTAACAGCCTATCAGGTGCCGAGTCTGTCTCCTGCTCTTAGAGATGGTTCCAGCTCTTAGATGCTTGGCCACTATGCACAGAGGCAAATCCAGCCTGGGCATCAGCCAGACTCAAAGATCTTCCAGCTGCCTCACTGATTCCTTGAGAGTGGGTGTCCTTGAGTGTCACAAGTATGTAGGAGCGACTGAGTGTCTTAATTACTGGAAGAAAGGTCAATTTCCTTGGCCTTGTTTACATGTCTTAAACTGGCAGTCATGACCTCAAGATCAGTTGCAGAAGATTGGGAATAGGTTGTGTTGCCAAGTACTTGAGTCTGAGACTATGCAGTGTTGGAGGCAAATCTGGCTTTATGGGGCCCCTTCTCTTCTAGGTCACATGCACCTTCCTCTTCCTAGTGGCCACCTCAGTTCTCCTGTGGACCCTCTCCCTCCCGCAACCCACTTGGTCAGTTCAGACCCCATGAATGTTCCTCATTCTGACCCTTCTCCTCCTTGGGACCCACTCCTCTGCTTGTTTGCAGGACTGAAGCAGAAAGAGGACATGAGTTTGTAGCATGTAGCAGAGAGATGACTGTAGCAGAAAGACGACATGAGTTTGAGCAAGCTCCGGGAGTTGGTGATGGACAGGGAAGCTTAGCATGCTGCAGTCTGTGGGGTCAGAAAGAGTCAGACATGACTGAGTGATTGAACTGAACTCAGCAGAAAGATGCCTGAGAACTTCTCATGGGAATGCAGGAGATGAACAAAGAAACTAGGCGGGATATCTGTTCCTTAGGAGGAGACCACTCTCCACCCTGCTTCCGCTGCCTCCCCTAAGAATATGGTGGCTCTCTTGGCTTGCTGCTGTTTTCTGAAAACCCTTAGTTCAGTTTCCTTTTGACAAAATTATGAAGAAGGTCAAGCATACTTCAGGCCCCTGGCTTCCCTTTCTGATACACCTTTTCCACTCTCTGCTCCAGCCTACCTCCCCCAATCCAACTCTTTCCTGTGAAAACCTCTTTCCCTGAAAAATCTCCTGCATCATTTCTTTATTCTGCTAAGATGCAAAGTCAGTGCTTTACCCTCCTCAGGGATATTTTAAGCCTCCTCACTAATTGCAGAGTGAATGAGAGACTCTGTCCTCTGTTGAAGGAACTTCAGGCATATGCTAGCCCATGGGAGGTTTCGGGAAGAGAGAGCACCTTCTATGACATTCAGATCACACCGACTTTGAGCTCCATGTGCCACAGAAGGTCAGTTCAAAGTCTGCTGATTGGTTGAAAAATTGTTTCTAGTCTGAGGATTTTTGAAAACTCTTTCAATGTTGTACTGTGGTATGCTAACTTAAGAGGAAAAAAATCCTCCAGAGATTACTTCAAAGTATCACTTAAAATTTATAAATGAAGGAAATGATTCCATACTCTACCATGATGATTTAACTTGGCTAGGTCATCTTACACTAAAACATGGACTAAAAAGATGATTTTTAATGGTGG TCONS_00235351 s 5' 0 TCONS_00235351 TCONS_00235352 s 3' 5 EMBV3_19986 TGTCTAGACAGACTGTGGGAGTTAAGTGATTCTTCTAAGAATTAGATACTTGTCACTGCC Gene BVV0101_048039 + 0 NULL GK000004.2:51826560-51912650 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184039 TCONS_00184040 TCONS_00184038 1 XLOC_111260 Coding TCONS_00184038 XLOC_111260 Coding Coding MET 4:51910050-51922180 j TSS137139 3531 2 TCONS_00184038_1 107 0.0702350608892665 3 0.709126885975761 0 0 0 0 0 0 0 0 0 8.28112976534418e-05 1.57382459979441e-27 5.18663009264648e-26 0 1.90290837599634e-07 2.82273412629786e-18 0.00175389559167417 0.00397095593458058 0.000536961400149292 0 0 0 0.000311102983061075 0.000456635569791933 0.00235906118991059 0 0 0 4.38116092673722e-55 8.62599129400304e-17 2.52634744688584e-06 NM_001012999.2 MET Bos taurus met proto-oncogene (hepatocyte growth factor receptor) (MET), mRNA. 0.0 1516 100.00 0.237609742282639 XM_005250353.1 MET PREDICTED: Homo sapiens met proto-oncogene (MET), transcript 0.0 1153 77.97 0.417162276975361 TCONS_00184038_1 sp|Q769I5|MET_BOVIN MET_BOVIN Hepatocyte growth factor receptor; 1e-69 229 100.00 0.990654205607477 1 coding 0 0 0 0 -0.0148388639957367 0.922011488285315 -0.00176431888486344 0.976743764798769 ATCTGAGGGCGTGCAGCAGAGCTCTGAGGGTGGGGGAGACACTCACCTGGGCAGCTGAATCTACCGTACTGCCCTTTCACCTGGTGGAGAAGTGGTCCTTTGGCGTGCTTCTCTGGGAACTGATGACAAGAGGAGCACCACCTTATCCTGACGTCAACACCTTTGACATAACAGTTTACTTGTTGCAAGGAAGAAGGCTCCTACAACCTGAATACTGCCCAGATCCCTTGTATGAAGTGATGCTGAAATGCTGGCACCCTAAAGCTGAACTGCGCCCATCCTTTTCTGAACTGGTCTCCAGGATATCCGTGATATTCTCTACTTTCATTGGGGAGCACTATGTCCATGTGAATGCTACTTACGTGAACGTCAAATGTGTCGCTCCATATCCTTCTCTGTTGTCATCACAAGATAATGTCAGTGGCGAGGATGATGATGACACATGATGGATGGAGGCACCTGTGCCACTGAGTCCCCTTCTGAGAAACATCACTGAACTGCCTGAACAACAGTCCACCCTTTGTCTAACATTCTTTTCACTGCCTGGCCACTGAAAGGCCACCGGGTACTTTTTGCTTTTGCCAAGATTGCACTATTATAGGACCTTATATTGTTATTAAAATGACTGGATTCTACAGAATTTCTCATCTGACAAAGCATCAGAGCAAGCAGCTTGGTCTCGCAGACCAGTGACCAACAGCAATTCTGCAGCTGTGATAATGCTTCTGTCACATTCAGGCCAAAACCCAAATGCTGGGTTGAAATTTTTTAAAATCAAGATCCCACTTGATTTCATATGGGAAAGTGAAGCAATGCATTTTGAAGACTTCTTAATGACAGAAAATTCAAAAGAAATGGTAATGTCCCAACAGGGCATGGCAGCCCTGGAACCAAACCACTCATTTAGAATTAAAATGTTTCAAAGAACTTATGTGTTGTATGAAAAACACATTTTTTTATCACCGATGTTGTCATTTGCTCATTAGGTAAACATTCCCTTTTAAATTTTTGTCTACACATTCCTTTTATTGGAGAACTATCCATAGACAATACAGTCAACATTTCAAAACAGCAGGACATGAAATATGTTTATAACTTTATAGGAATATTTACATATTGTACATAAACAACATTTACGTTTTCATAAAATAGCTTAGTCGCAGTGAAATATTTGTCATTTAAAAATCAACTGTTTAAGAATGATACTTTGCTAATCTGGTTGTGGACACTTAGAAGTTTTATCTTTTTTTTAATGACAACTCTGAAAATAAAACAAGTAATTTGTGATGACAGTTGTTTTTAAAGGTAACTCAGCATGTTTTTGAAGCAGAATACCTCTGACTAAAAGCATTATTGGTTCCAACCATGGCTTATATGTAGAGCCTTGGAAAGAATCAATGGACTGGAAACGTCAGCCTCTTTGTCAGGTGGCAGCTTTCCACCCCACAGACAATTGAAACAACCAAATCAGGGGGAATCCAGTTTTGTATTAGAACATTATGTGTTATTAAGCAAAACATATTTTAGAGAAAAAATATGTTGATTGAAAGTTCTGACCATTTCGCCTGGATGAACAGTTACTCTGGTCAGGACTTTTGTGATGTTTTGTTCTGTGGGATTTTGTGCTTACTACTGTATAATGCATGTGGCACAGGATACTCAAACTGGTTTTGTTGATGTAAACATTTAAAGTATTATATTTTTATAAAAAGGTTTATTTTTAATGATGTGAGAAAACTTTTGTTAGGCCACAAAAATACTGCACTGTGAACATTTCAGAAAAGGTATGTCGAACTTGGATTCATAACAGCATGATTTTAAATGGCTGTGAATAAGTGATAAGGAAATGTACTGACTGCCAGAACTCCCCACCCTCATTACATCACCAGGACTTGAAGCCAAGGGTTAACACAGCAAGCTATAAAGAGGGTGTGTTTATAGTAGAGTTGAGTTAAAACCCAATAGTAGAGTTAAGCTCTTTTTGTGAGACAGTGATTACAACTGAAAGTTCTTTGACAGTGGTGGAATTTACCAGAAGACCCAAGGAATTGTACTGCAGAGATATTCCAATTCAAATATTATTATTTCAGAAGTGTATAGAGTGATACTAATTACAGAATATTGTAAATAATGGATGAGGAAGAAAAAAATCTGCTCTGCAGGAAAAAACCGTTTCTACTAATGTCAGGAGAATGAATACATCAAGAATAGAGCTTATGGAAACAACTCATCAACAAGACTGCACACCTGTATATATGCTTGAAAAAGCTACAATGTGAATTTCATGTTTGCTATTTATAAACGTGTCCTTTGGTTAATATGTCTAGACAGACTGTGGGAGTTAAGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGTTGAGCTGAATGGTACTTTGTATGTTAATAGTTGTTGTTCGGATAAATCATACAATTAAAGTGATGTATCATCTTGTATACTGAAAGTTGGTTATTGTTAGTCATGCTTGATTACCTGCCCGTTTACATAAGGACAGGGGAAGCCTAAGATTGATTTTACCTGGCTACATCAAGTCATCCATTAGAAGAGTGTTGTTAGTCAAGTTAATGCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCATGTCTGACTCTGTGCGACCCCACAGACGGCAGCCCACCAGGCTCTCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTTGTGTCCGACTTAGCAACCCCATGGACTGCAGCCTACCAGGCTCCTACTGAAGTGGGTTGCCATTGCCTTCTCCACAAGTTAATGCATCCTTACCTAAAAGAATTTGCATCCCTGAGTTTCAGGAAGTCTCTGCCTTTCTAAACCATGTTTCCCCTGACCTGCTGCATTTCCTAGCATTTCCCTAACAGTCTTTCAGCTGCCAGAGCACCTGGCCCCTACTTCAGCTCGATGCTCTTCTCCAGTAAGGTGCATCCTTGTACCAGAAGATAACGACAATGGAACTGCAACCTGCAGTTGGCACAAAGATACCCAGTTGGGTGTTGGAGGAGAGACAACTTCTTACCGCCTGAAAACCTCACTTTTCATGGAGAGTTCCCACTCTTCAGGTGTCCCCAGGGATTAGCGAAACTATCTTCAGGTTATATCTGTGAGTATTGTTGTAATGGTAAAGGAATTCAGAGGTGAAATTTCAGTCATCTAAGTCTTGGGGCAATCTGATTTTTTTTTTTTTAAAAAAAGGTCCAGGTTTAAACCAATGCCTACAAAGTGTGGTGGGGGCTGATTCTTTAGTGAGAGAATTTAATGCCCATACCCAGTCAGACTCTTTCTCTGCCAAGAGATGCATTTCCATAGGACGTTGTCAGACCATATACCCCCGAAAGATAACTTGTCATCCTTACATCCCAAGTATCTGGCACGTAGCAGATCTTCAAACAATTGCTCAACTGAAACAGGATTTTCTTGTC EMBV3_30112 ACTATGGTGGAATTAATGGCAATGGCCTCCAAGAGGGCTTATGCGACACACCGGTCTACT Gene BVV0102_067803 - 1 EMBV3_24757 GK000002.2:65527198-65677507 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00109780 1 XLOC_065684 NonCoding TCONS_00109780 XLOC_065684 NonCoding NonCoding - 2:65672437-65673114 - TSS81401 677 1 TCONS_00109780_2 118 0.0620384047267356 1 0 0 0 0 0 0 0 0 9.70739300090412e-07 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000328832498058899 0 7.42892808367741e-05 0 0 0 0 0 0 XR_139113.2 LOC100849044 PREDICTED: Bos taurus uncharacterized LOC100849044 (LOC100849044), 1e-130 470 78.45 0.871491875923191 0 noncoding 0 0 0 0 0.0481744103386602 0.732687813329164 0.0403114743888238 0.394857655396513 GATTGTGGTTATCAGTTTGTCTGCCCTCTGATGGAGAAGGATAAAAGGCTTATGGAATCTTCCTGATGGGAGAGTCTGACTGAGTGGGAAACTTGGTCTTGTTCTGATGGGCAGAGCCATGAATGGGCAGTAAACCTTGAATCCAATTTTCTCTTGATGGGTGGTGCTGTGTTCCTCCCTGTTATTTACCTGGGGCCAAACTATGGTGGAGATAATAAAGATAATTGTGACCTCCTTTAAAAGGTACCATGCAAGCACTGCTGCATTCAGTGCCCCCAATATTGCAGCAGGCCACCGCCAACAACCCACACTCTGCCAGAGACTCCTGGATACTCCTGGGCAAGTCAGGGTCAGTCTCTTGTGGGGTCACTGCTCCTTTCTCCTGGGTCCTGGTGCACACAATGTTTTGTTTATAACCACCAAGAGTCTGTTTCCCCAGTCCTGGGTATGTTCTGGCAGCACTATGGTGGAATTAATGGCAATGGCCTCCAAGAGGGCTTATGCGACACACCGGTCTACTGCACCCAGAGCCCTTGCCCCTGCAGCAGACCACCACTGACCCATATCTCCACAGGAGACACTCAAACACAATTATGTCACAGTCTCTGAGGAATCTCTGGGTCCTGGGCAAAGCTCAGTTCAGTTCAATTGCTTATTCATGTCCAGCTCTTTGCAAC TCONS_00105489 . 3' 4394 TCONS_00105489 . 3' 5070 EMBV3_43262 CCTTGGCCAAACCCGACAAATGCCAATTCAGCTCAGGAGATATGGACAGTATTTCCAAGA Variant GeneID:616564|SSBP2:NM_001035478:11_cdna 730^970 2 EMBV3_32026 GeneID:616564 7 GENE SSBP2 MGC129033 single-stranded DNA binding protein 2 EMBV3_12599 GGGCGAGAGGTTGGGCATCAAGCCCGAGAGGATGCTACGCGAAGAACTTTGGGCCCAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20304 GGCATTAGTACTTCTGTCGACACCCATTTCTCAGCTAAGAAAAATTCAGGTATCATAGGG Gene GeneID:527628|LIPT2:XM_002693459:34_cdna Constitutive 0 NULL GeneID:527628 15 GENE LIPT2 NULL lipoyl(octanoyl) transferase 2 (putative) EMBV3_42929 CCCCTCATCAAGTTCCAGGTGGGGCTGAAGAAGCTGAATTTGCACGAAGAGGAACATGTC Gene GeneID:533656|VDR:NM_001167932:81_cdna Constitutive 0 NULL GeneID:533656 5 GENE VDR NULL vitamin D (1,25- dihydroxyvitamin D3) receptor EMBV3_36464 GCCTTCAAGCCAATCCTTCTTGCTGTATGTTTGCAGCCTACTGTGGTAGATAAGCAACAG Gene GeneID:541123|ARRDC3:NM_001076257:5_cdna Constitutive 0 NULL GeneID:541123 7 GENE ARRDC3 MGC142575 arrestin domain containing 3 EMBV3_28504 TGGCCAAAAGTTTAGACTGAAAAATTCTGTGACCTCAGTGTTTGGGAGGCTTTTCCGTAT Gene GeneID:515501|ARHGAP20:XM_002692973:34_cdna Constitutive 2 NULL GeneID:515501 15 GENE ARHGAP20 NULL Rho GTPase activating protein 20 EMBV3_20445 AAGGTGGCTTTGGAGCGGCTCCTGCCGCAGTCCAGAGCACAAGAAAGCAACCAACAAATT Variant GeneID:785267|CCDC84:XM_002693129:565_cdna 164^327 3 EMBV3_19613 GeneID:785267 15 GENE CCDC84 NULL coiled-coil domain containing 84 EMBV3_24931 GCAGAAGTTTTGTGCAGAAATTAATGGGCATACACCCACTACACAGGGCAGAGGCCACAG Gene BVV0102_220466 + 0 NULL GK000006.2:68824913-68827869 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203453 1 XLOC_124180 Coding TCONS_00203453 XLOC_124180 Coding Coding ZAR1 6:68820718-68826947 = TSS152395 3581 1 TCONS_00203453_3 384 0.0756771851438146 4 0.425658317276814 0.00707792651925769 0.00551151837697581 0.0054558061310079 0.00675277898944414 0.00650091967635591 0.00194189863568892 0.00559897449595089 0.00550426379327587 0.00757683576430457 4.58015376730875e-05 0.000102103829579997 3.65451163275073e-05 0.0005648032171212 0.000968224748490879 0.000767584242841983 5.1628290962808e-05 0 0 0.01416893936393 0.0139484600269792 0.00614257033044914 1.70967495916344e-05 0 3.27708358193732e-05 0.00707892902243862 0.00725579203515282 0.00348629533575146 0.000291025563292846 6.1004395442517e-05 1.94098656433321e-05 NM_001076203.1 ZAR1 Bos taurus zygote arrest 1 (ZAR1), mRNA. 0.0 2666 100.00 0.412454621614074 NM_175619.2 ZAR1 Homo sapiens zygote arrest 1 (ZAR1), mRNA. 1e-139 502 89.42 0.105277855347668 TCONS_00203453_3 sp|Q86SH2|ZAR1_HUMAN ZAR1_HUMAN Zygote arrest protein 1; 2e-156 452 61.92 0.997395833333333 1 coding 0 0 0 0 -0.602095267999768 0.00679142950172101 2.92310204360741e-05 0.999568696121948 CCGACTGCCCCTGGTAGGTCGTCTATTTAGGGCGCCGGGGCCGACGGGCAGGCGGCAGGGGTACACTGATGGCTGCCCTGGGGGACGTCGTCCTGGATGGTTACCTGTACCCGGCGTGCGCTCTCTACTCGTACCGGTGCCTCTACCCGGCCGCCGCCGCCGCCAAGGGAAAAAGCGGGGCGGACGAGGGTGGCTGGCGACCCCGGGGCGGGGGCTACCCTCCCGTTTCCTCCTCCTCTGACGGCGCGGCCTCGTCGTCGTTCCCGGGCCACGGGCAGCTGGCGGCCGCCGAGTACGTCCACAGCTACCAGCGCGCGCAGCTCATGGCCCTGCTGTCGCAGGTGGGCCCCCGCCCGGCCAGCACTCGGGACGCGGCGGTGCAGGTGAACCCGTTCCGCGACGTATCGGTGCAGTGCTCGCTGGGGCGGCGGACGCTGGGGCACAGGGCCCGCGAGTCCGGCCCGAGTCCGGATCCCGAGGGCGCGGCGGACGCGGGCGGCAGCTGCCCGGCCTCCCCGCAGCGCGCCCGCCGGGGCCCGGAGCAGGACAGCCCGCCGAGCCGCGCCCCGCGGCGCGTGCGTTTCCTGCGCACCCTGGCTGTGTACTCGCCCGTGACCTCCCGCTGCCTAGCCACCCTCCTGGAGGGGGCCGAGGCCGTGGCGGGCCAGCAGAGGCCCGGGGAGCCGGAGACTGAGCGAGGGCCGCCACCTGCGAGGCCCCGAGGCCCCGAGGAGGGAGACGGGTCGGCGAGGAAGGTTTCCCTGCAGCTGCAGCCTGAGGAGGACGAGGCCCAGGCCGCAGTACCGGCAAGCCGCGAGCAGCCCCCGCCCGTTGCCAGGGTCCCGGACACCGCTGGCGAGAGATCGTCGCCCCGGAGCCCCCAGCCGAGCAAGGAGCGCCTGCGCTTCCAGTTCTTAGAGCAGAAGTACGGCTACTATCACTGCAAGGACTGCAATATCCGCTGGGAAAGTGCCTATGTGTGGTGTGTACAGGGCACTAACAAGGTTTACTACAAGCAGTTTTGCCGAACATGCCAGAAGTCTTATAACCCTTACCGAGTGGAGGATATCACCTGCCAAAATTGTAAACAGACTAGATGCTCCTGCCCAGTGAAACTTCGCCATGTGGACCCCAAAAGGCCCCACCGTCAAGATTTGTGTGGGAGATGCAAAGGCAAACGCCTATCCTGTGATAGCACTTTCAGTTTCAAATATATCATTTAAGTGAATGGTGGGGGAAAAAACCCAAGAAAACTGAGGTCCCACTGTGAATGTGTGCTGCTGGAGCAGAAAAGCGAGCTGAGCTTTTTTGCCCCCCATGTCTCTCCTCCTCTTCTGCCGCTCCCTCGAAATACTTCGTGGAAGGCTGTTGTTTGGCAAAACTGTAAAATAAAAGCATTGCAAAACAGTTGATACACTGCATAAAATCCGTAGGAGAGCCTGTCTTAACAGTCTGTGCTTGTTACTTTAGTATTTGTCCATTGCTTATGGAGCAGCCAGGCTCTGAGTTAGGCTAGTCATTACTTGACAGTATGAAGGGGCTCACTGATGGGATGTTTATTGCTTGTAGGTCTGATGCCTATAAGAAATTAATTGACCAAAAAAGCCATCTATTAAAATGAGCATTCTTCTGCAGGAGGTGAAGGCAGAGCTAGGCCTTGATGTTTGAGGGGACAGGGGCGATGGGTAACCCAGTCGCAACCGGGAGTGGACGGCCTCCAGATTACCTCAGTGTAATAGGTGCTGAGGGACAAAGGCTCTGAGAACCTGACTTGCTGACAGCGTCACAGATACGGAACAGATGTGGACTGGAATGGGTGGGGGGCTCTGAGGGCAGTTTTTAGATGTTAAATAACTTCAAATGAACTTCAGCTGGTAATGGAACATTTAAAAAAAAAAAAAGGTCTCCTAAATGTATTTAAAGATGAAGTTGGAGGCAGCTTTAGCCTTTGTCATTGTGAACTTGCAGTTCTGTAGGTGGCAAGTGTTTGGCACCATTTAGCACTATCCTAACTGTGCCTAATAGCTTTCTGCCAGATTACCAAGAAAACACCGAGACCCTGGAGCATTGGTGGGGGTGGGGTATGACAGGAGGGATTCTAATGAAATCAGAGTTGAGAGCTATTGGTTTCCTGGTTACAGAAACAACATAATTGGAACCAGGTGCTAATTATGCCCTCCAAATTTCTAACCATCCTACTTCAGTTAACCCTTACTACCTTAGAGCAACCGTGTATATAGTGAGTCTGTTAAACATCTTGGATGCTTGTACGTAGACAAATATGGGGAGTAAAAGAAACTAAAATTGAAGTCTCTAGAACCTTTTATAGTGGGGGGAAGGCCTCTAACCCCATGGCCTGGTATTTGTAAAAATGCAGAGTCTTAGGCCTCTTCCTACTGAATCACTACCTGGAGGTGAAGTGTTTAATAAGCACCCCAGATGTTGCTTATGTAATTGAAGTGTGAAAACAATTGAGTCAGCCCTGCAGTTCCCATGGAGAAACATGGCTGTGGCCTCTGCCCTGTGTAGTGGGTGTATGCCCATTAATTTCTGCACAAAACTTCTGCTATGCACTATGTAAGAGCCCCTTAGCACCTGGTAGAAAACAAAAGGGATCTGACTTGGGGAGGGAAGAGAAGGCTTGCCTGAAAAAATGACACTACAGCTGAGCTAAAGTTTGGATGAGCTGAATTAGGCGAAGAGGGAAAGAAAGAACTTTTCCAGACTAGGCTAACATGTGCAAAGGCCCAGTGGTAGAGAAAGCCAGGAGGCCCCAGTGGCAGAATACACTGGAGGACAGGGGTGGGTGTGATGGCTGGCATCACTGGTAGGCCCAGGCTGGGGCAACTGGTCCTCGAATGTCATCAGGATCCACTGAAAGGCTTTAAAGCTGTGGTGGGGCCTTAGTGACAGATTCACCTTTAAAAAAAAAATCACTCTGGCAATACCATGTATCCTCATAAACCCATAAGAAGTCGTGCAAAGATCAAATGGCAGTGGGGCCAAAGAGAAATGCAGGACGAGGACCACAAGGTGTGGGTGAAGGTGATGAGTTTTGTGTTAATGCTGTTAACTCATCGTGAGGTCACTGGTAGGTACACGGATAGGAAACCAATTTGACTTACATAGCATGCAAGAGGTACATATTTACTCTAAGCATCTGATGAACAAACGAGGAACAACAGAAATGAGCCCTACAATGAGCCCTAGGACAAATTCAATGGTTATTAATACGGCTATTAATCATTCTTTAGGCTTAACATGGCCATTACTTTTCCCAATAGTGCAGTTAACCCTATTTTACAGTTGAGCAAAGCCAGGATCAGAGCATGTTTTGCTTAGAGTTAGTGGCCTTTCAGAAACTGAACAAAGTGGTACAAGAACTTGTGATGAGAGTTATCGTCAGAACATTCTGGCAATGAAGCACTGTCAAACTGGATGTATAATTAGAGATTTATGTGATTTTTCTGAGTGAGAGTCTGAGAGGCTAGAAGGAAATACCCCAGAATGCTATTCTCTCTTGGTAGCAGGGGAAGTGATTCTAGTTTTGTTCATGTTTCTTACATTTGCTAAAGTGACAG EMBV3_33549 ACAAGCTATCTGTGGTGAAGTTCTGATAGGGTGTGATGACAGGAAAAGAGGAGGCGCAGG Gene BVT0102_140212 + 0 NULL GK000022.2:30803700-31404293 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128436 1 XLOC_077888 Coding TCONS_00128436 XLOC_077888 NonCoding Coding - 22:31182405-31321301 - TSS95815 759 1 TCONS_00128436_3 60 4 0.994564239173476 8.20375491946351e-05 0.000416581479187962 0.000233299500480436 0.000810995579142291 0.000544919631229548 2.58200041695632e-05 2.65568633227776e-05 0.000306497758501207 0.000256562456844763 1.85775755729662e-296 0 0 0 0 1.33289111969026e-05 0 0 0 0.000440433308748512 0 3.82255318111519e-05 0 0 0 0.000190327385666348 0 1.59495473432031e-237 0 0 0 0 noncoding 0 0 0 0 0.120112067126032 0.391009357267883 0.0572996236259979 0.462742289153379 GTGGAAAGGGGTCAGCAAAGAGCAGAGGGACCACCAGTGCACGGTCTGGAGATGGGAGTGAGCTTCACTGTTCTGAGTCCAAGCAAAGCAAAAACGTACTCTAATTCTTGACTGAGAGATTTACTTGGAAAATGAGAAATTCCTGCACTACACTACTTGCCTAAAGTTTCTTGTTGGAGTCAGTCCTTAAGGCTCTAAGTTCCTCTTGTCACCAAGTCTGATGACTGATGGCAATTAAGCTCCAGAAACAAGCTATCTGTGGTGAAGTTCTGATAGGGTGTGATGACAGGAAAAGAGGAGGCGCAAGGAATGGCAGTGCATGCTCTTCTTTCCAGTTAGCTGAATGAAGATGAAAATATGCTAGACCTGATGAAAATAAATGTGGCACTTGTGATACCCCTTGTCACGTCCAGTTGGCCCAGCTGATTTCAAGGCAGCTGTGGAGGACAGTGCCCTCTACTTGCCACTGTCACAGTAGGGCTCATGCTCCTCTGTCATGCTTTTTCTGAAGCTGTGGACAGGCAGCAGACAGGCACAGCTCAGGATTGCCCTCTAGAACAGCCTTCAGCCCAAAGGAAATGGGACTGAGTGGACAAATGTCCATGGCTTCCTGTCCTTCTGTGAGTCGGTTACAAATGTCCTTCTTATGCATTTCCTCCGAACAGCACCCATGTGATGGAGTGCTAGTTTTCTCTGAGGCAGCCTGCTTATTCATGCTCCGTCTTGGTTTTTCTCTCTTCTGTGCCTCACTTTGTCTAC TCONS_00126598 TCONS_00126599 TCONS_00126615 TCONS_00126619 TCONS_00126621 r 3' 375146 TCONS_00126598 TCONS_00126599 TCONS_00126615 TCONS_00126619 TCONS_00126621 r 3' 375588 EMBV3_02762 CACAGGCTGGTAAGAAGGATGAGATGTGAGCTGTCATAAATGGTGTAGCAACCAGACAAG Gene GeneID:497025|BHMT:NM_001011679:62_cdna Constitutive 0 NULL GeneID:497025 10 GENE BHMT MGC137173 betaine-homocysteine methyltransferase EMBV3_30074 GCTTCTGTAGTTTCAGGGAGCTCTAAAGTTTTTCTATGTCCTAAACTCCTTTTCCGGGAG Gene BVV0102_041329 - 0 NULL GK000006.2:16510245-16565617 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18886 GTTGGCCTCCGAGGAGAGAGTGAAAACTGAGCCGCTCTGCTGCTGTCGCTGTTTTGGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19813 CTTCCCACTGGCAGAAAGGGGATGAACCACAATAGAACCTACCTCGCATGTTCCTCACGA Gene GeneID:532587|BLK:NM_001075968:17_cdna Constitutive 0 NULL GeneID:532587 8 GENE BLK MGC142356 B lymphoid tyrosine kinase EMBV3_27055 AGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGAC Gene BVV0102_306151 + 0 NULL GK000028.2:17764277-18003735 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209635 TCONS_00010779 TCONS_00136862 TCONS_00218782 TCONS_00238892 TCONS_00233446 TCONS_00031937 TCONS_00179125 TCONS_00224115 TCONS_00048786 TCONS_00251858 TCONS_00177939 TCONS_00248862 TCONS_00124128 TCONS_00251853 TCONS_00124121 TCONS_00207136 TCONS_00200329 TCONS_00020291 TCONS_00135527 TCONS_00031488 TCONS_00087877 TCONS_00249014 TCONS_00152669 TCONS_00079688 TCONS_00141271 TCONS_00107333 TCONS_00063048 TCONS_00238434 TCONS_00055354 TCONS_00039852 TCONS_00070842 TCONS_00109885 TCONS_00056147 TCONS_00207067 TCONS_00254568 TCONS_00190575 TCONS_00233374 TCONS_00048373 TCONS_00122496 TCONS_00023645 TCONS_00007508 TCONS_00208725 TCONS_00122326 TCONS_00011865 TCONS_00239075 TCONS_00188739 TCONS_00197542 TCONS_00178072 TCONS_00187395 TCONS_00251295 51 XLOC_128146 XLOC_006330 XLOC_083073 XLOC_132101 XLOC_145558 XLOC_142928 XLOC_018182 XLOC_108898 XLOC_137411 XLOC_028917 XLOC_154799 XLOC_107712 XLOC_151805 XLOC_075680 XLOC_154794 XLOC_075673 XLOC_125654 XLOC_121981 XLOC_010968 XLOC_081750 XLOC_017736 XLOC_052666 XLOC_151957 XLOC_092434 XLOC_048572 XLOC_085699 XLOC_063244 XLOC_037775 XLOC_145101 XLOC_033162 XLOC_023669 XLOC_042619 XLOC_065789 XLOC_033950 XLOC_125586 XLOC_157500 XLOC_116610 XLOC_142856 XLOC_028505 XLOC_074051 XLOC_014312 XLOC_003069 XLOC_127237 XLOC_073881 XLOC_007415 XLOC_145741 XLOC_114780 XLOC_119203 XLOC_107845 XLOC_113441 XLOC_154237 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_37924 GAAAAGCCCTCCAGAATTGATTGGGTTTGGACTTTTGAGCAAGCTTCCCATTCGAATTAA Gene GeneID:506790|TXNIP:NM_001101875:59_cdna Constitutive 3 NULL GeneID:506790 3 GENE TXNIP MGC154995 thioredoxin interacting protein EMBV3_13493 GCAAAGCACAAAAGATAATTGGATGTTGAAGCCCAACCAGCCCTCCGCCTTCTCTAAGGC Gene BVV0102_265659 + 0 NULL GK000025.2:39526239-39565709 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13117 ATTGGCTGGAATTTGGCGCAGTCAGCGCGGTGCCGTCATCTCTCTAGGTATGGAAGGAGA Gene BVT0102_038829 + 0 NULL GK000002.2:107623030-107646741 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103325 1 XLOC_062078 Coding TCONS_00103325 XLOC_062078 Coding Coding CDK5R2 2:107620511-107627354 o TSS76750 6843 1 TCONS_00103325_1 373 0.113985094256905 1 0 0.000343741494241562 0.000227445047233977 0.000385085849984328 0.000408341609755727 0.000329465792850362 0.000197342815391897 0.000343102289590085 0.000231931415443154 0.00108217099878417 0.000253375137032443 1.93325383777561e-05 0.000282711913305256 0.000197170422876195 0.000281167899500071 0.000247007512453916 1.80292287662515e-05 0 1.61798777317583e-11 0.000658133973245249 0.000187899760793385 0.000241929408369697 6.43615494043234e-12 7.2822991258797e-12 1.85110271099938e-11 0.000955163122465684 0.000504619002215149 0.000327700263305784 6.60304582219984e-06 1.33372640450083e-05 9.6335902773466e-06 XM_002685576.2 CDK5R2 PREDICTED: Bos taurus cyclin-dependent kinase 5, regulatory subunit 2 (p39) (CDK5R2), mRNA. 0.0 4549 100.00 0.368405670027766 NM_003936.4 CDK5R2 Homo sapiens cyclin-dependent kinase 5, regulatory subunit 2 (p39) (CDK5R2), mRNA. 0.0 2749 84.05 0.362121876370013 TCONS_00103325_1 sp|Q13319|CD5R2_HUMAN CD5R2_HUMAN Cyclin-dependent kinase 5 activator 2; 0.0 592 93.03 0.997319034852547 1 coding 0 0 0 0 -0.162222860603623 0.28108378845339 0.0369322736635619 0.64821493820826 AGCTCAGACCCGGAGCAGCCGGCGCAGAAAAGCCAAAGCAGCCGCGTTCTACTGCCCGTTCCCGCGCCCGGGCCGGGGCTGGGCCCCCACCGCCGGGTCCCCGGGGGCTGCAGCAGAGGCGGCGGCGGCGCGGCGGGCAGGGGCACCGCCCGCAGTTCCCGCCGGGGCCCGGGCGCCGGCCCCGCTCTGCAGGATGGGCACGGTGCTGTCTCTTTCACCCGCCTCCTCGGCCAAGGGCCGGAGGCCCGGCGGGCTGCCCGAGGAGAAGAAGAAGGCGCCGCCCGCGGGAGACGAGGCGCTGGGGGGCTACGGGGCGCCGCCAGCGGGCAAGGGCGGCAAAGGCGAGAGCCGGCTCAAACGGCCGTCCGTGCTCATCTCCGCGCTCACCTGGAAGCGCCTTGTGGCCGCGTCCGCCAAAAAGAAGAAAGGCAGCAAGAAGGTGACGCCCAAGCCAGCGTCCACCGGCCCCGACCCCCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAAGGTCGGGATCCCCCCGACGGCGGCGGCGCCGCCAAGCCCCTGGCGGTGCCCGTGCCCACTGTGCCCGCGGCCGCCGCCACCTGCGAGCCGCCGTCGGGGAGCAGCGCCGGCGTTCCGCCGCCAGGCTCGGGCGGAGGGAAGCCGCCGCCGCCGCCGCCCCCAGCCCCGCAGGCGGCGCCGCCGGTCCCTGGTGGCTCGCCGCGGCGGGTCATCGTGCAGGCTTCAACCGGCGAGCTGCTGCGCTGCCTGGGCGACTTCGTGTGCCGGCGCTGCTACCGTCTCAAGGAGCTGAGCCCAGGCGAGCTGGTGGGCTGGTTCCGCGGAGTGGACCGCTCGCTGCTGCTGCAGGGCTGGCAAGACCAGGCCTTCATTACGCCCGCCAACCTGGTGTTCGTGTACCTGCTGTGCCGCGAGTCGCTGCGCGGGGACGAGCTGGCGTCGGCCGCCGAGCTGCAGGCCGCCTTCCTCACCTGCCTCTACCTCGCCTACTCCTACATGGGCAACGAGATCTCCTACCCGCTCAAGCCCTTCCTCGTGGAGCCCGACAAGGAGCGCTTCTGGCAACGCTGCCTGCGCCTCATCCAGCGGCTCAGCCCGCAGATGCTGCGGCTCAACGCCGACCCCCACTTCTTCACGCAGGTCTTCCAAGACCTCAAGAACGAGGGCGAGGCCTCCGCCAGCGCCGGGGGTCCACCCAACGGGGGCGCGCCCGCGGCCCCCTCCACCTCCTCCTCCTCCTCGGCCGCCAGGGACAGCTGCGCGACTGGAGCCAAGCACTGGACTATGAACTTGGACCGCTAGGGATAACCCAGGGCCGCGCCCGCCCCCCGCCCCAGCCCCTTACACACACTCGGAGCCCCCGGGACCATCAAGCCGCCGCCGCTGCTACCGCCGCTCCGCGCCGTGGCCGGAGGAGGAGCCGCCCCTGCCCCGCAGGGGAAGGTGGAGGCCAGGATGCCAGAGGCCTCGGCGTTTGGATTTGCTGGGCGCAGGGTGGGGGTGGGGGATGAGCGCGGGAGAGGAACCCCCAACCTCACCCTTTCTATCTGTCTGCGCCCTCATATCTCCAATTCTGCCCGGGTCACCCCCTTCCCTTCTCTGTGTAAGTCCGTCTCCCTTGGACTTGTCCATTTCTTCATCTCCTTCCTGTATCTTCACCTTCCCTCCTTACTTCATCTTTTGCCTTCCCACCTTTCTCCTTGCAGTTCCACTTTCCATTCCTTGGGTGTGTGTTTCCGTCTCCATCTTACCCACTACCTGACTCTCTCTCATTGCCCCGTTTCTCTTTCTGCACCTCTGTCCCCATTTCCCCTTCTTCTCTTTTCCTCGCTCCTGGCATGTGTCACCATCTTCCCCCTGCCATCTGCCTTCCCCCCTCTCCGCCTGTGTTAGCTTGCATTTCTCTCTTCGACTGCGACCCCGTATTCTCCTCCCCAGACCTAAGGAAACATGGATTCTTGATTGGGATCGGCTGAGGTACAGCAAAAATTGCAGCCCCGGGAGCCCAGATAACCACCAGGGTCCTTCGCCCCATCCCCACCACCTCTCCCCACCTTTTCTAACGTGTTGCATGCCGGGAGTTGGGGGCAGGGGGATGCCAGCTTCAGGAGGCTGAGGTTTGGGAGCAAAAATCAACCTAGGAGGTCACCCCGGCGGTGGCGGCGGCGCCTCAGCAGAAGGGTGAGAGGAGACAGAATACTCTTCTTACTCTGAGGGAGGAGCACCCCTCTTCCTTGCCCTTAGGTGTTTTTGTCCCCCCCACTCCCCAGGTTTAATTTATTTGGTTGTTTCCGGAGGGAGGGGGGAGGGGCGGGGTGGGCCCGGAACTGTCTGAGGTGCTGATCTGAGGCCGGACCAGAATTCTCCTGGGAGGGTACCAGGGACTGGGTTGGGCCTGGTGCCGTGTCCAAGGTGCCAATGATGCGGGCCGACGGTGCGGGCCGCATTGTCTGTCTGTCCGTCTGTCCGGGAGAGAACTATAAAGCGCTGGAAGCGCCTGCAGATGTTTTTGCGCCAGCCTTTTTTTGGGCCTTGGGAGGGAGGGAGCAGGAGTGGAACTATCACAGGCAGGGCACTCGGGCCCCCATGGGCCTAGTGGGGAGGGTCGAGTCCCTGAGAACGGCTACTGTTTCTGTCACCCCTCCCCCCACTGACTTCCATCTTACAGAGAGCAAAGTGAGGGAGCCAAAGGATGAGGCCTGGTGGTAAGGCTGAATTTCTGCCCCACCCCGTCCCCCCACCCCACCCCCCCGCCACCTCTGCCTTCATTTTTTCTGACCACCTGCGCATTAACGCCCAGGCCATTTAGGGGATAAGTGATGAGGACAGCGGAAGTTGCTCTCCTTTTACAGAGTGGCTCATTGAGGCAGCATCAGTTAGTTATTGTTGTTGTTTACTCTCTTTCCTCCGCCTCTCCCTGCCATTCATTCTGTCAAGAGTTCAGTCAGGCCTGACTAAGTCTGTCTTCACCACTCTCAGGTGGGGCCCGAATGCCACACTTAGCCCCATACTCTTTCCCCTACCCATGGGTCTGCTTCAAGACTGTTTCAGCCACATGCCTACCCAGGGCAGCTTTGGGAGGTCCATCCCTGCTTGAGATTCAGACCTAGCCCTTAATCGCCAGGGAGGCTAGTACCCAGGCAGCCTGGAAGACAGGAGCCATTCTTTGGGGTTGAAGGAGGAAAAGTAAGCTATTTAGCCTGAGATTCCTCTTTGGTCCCCATTGCCTTCTTAACCACTTAGCTAAGCGCCCCATTCAGTTTTTCATCGGCTCGAGGAGGCCCTGGCTGCAGTGGAGCGCTGGCGTCTGTGACCCTGATCTCCACGGAGACCTCCGAAGCATTCGGAGAGAGAAGAGGGAGAAGCCCACCTAGAAAGGCCCTGGTTCGCTGTCCGTGGTACTGACGGGGCGCACTTGACAAGGGTGAGGGAGGGCACGCAGGAGTAGGAGGAGCTGCAGACGGCCTCAGTTAGGTTTTCCGGATAATTTGGGAGTAGATGTGATCCTTTCTGGTGGTAAGTCACAGGAGTCTGGCCCAAGAACTCAGGAAGACTGTCCTCATAGGAAGACAGATCTCAACTCTTCCCCGGACTCTGCCCAGCTCCCTCTCAACCGGCCAGTAGCCGGAAATCCCCAGTCTAGATTTGTGAATCGAGTTCCCGGAGGGAGGTGGGGAGAGCTGGTGGAAGGAAAGGCGGGAGCAGTTGCCCATTGGCTGGAATTTGGCGCAGTCAGCGCGGTGCCGTCATCTCTCTAGGTATGGAAGGAGAGAGGGAGGAGCACTTGGGTCACCCCGCGGCTGTCGCCATAGTAACCAGACTGAACAGGCGGGGCAGGGGAGGAGGGTGCCCTTTCCACTCTCTCCTCTCTGGCGGGGAGGTTGTAGAGAACAATCCTGGTCCCTCTTATTTGGAACTAGTTATCGAGACTATTTGAGTGGGATTTCTGTGTTAGAAGAGCCCAATGGGGATGGAAAAGAGGCTCCTACAGAGACCCTCAAACATCCTTGGGGAGGGGGCTCTAGATTCTGCCCCTGAACGCATAGACACAGCACCCTTCTATTACTACACTCCTATGAGCACTGGAACACACACACATACAGGTGGGTGACAGCGCGCTTGCCTCCAAGTACCTGTGGTCTGGCATTTGGAGACCTAGAATGAGAAAAAAGCCTTAGGGCCTGGTGACAAATTAAATCTCACTTTCCTTGCCACGCCCCAGGCATGAGACATTGCCATAATCCGATTAAGTAGTGAGGGACTGGAGGAGGATCAGCATGAATACAGGGAAGAATTAGCCTCCTGGGTCAAACTTGGTCAGATTCCTGTTTTCTCAGGGAGAAGGTGGTCATTAAGAGAAGGACTCGGAGCAGTCTTTTGAGAAGGCAAAGTGAGAAGGGAGTAAATGCAGAAACAGAGTGACGTGCCTTCTCTTGATTGCCCAGAAGTGAACCTCTGGGAAAATAAGTCCAGGCTTAGGACAGAGGTGGTGAAGAGGGCCCAGAGGTCTAGAGAGTCCTGCAGGAATGAGGGAGGGGTGGGCTGAGGAAAGAATGGAGATGGAGGATAGGAGACAGAAACCCAGATGGAGCCATGACTCAGCACTTATGCTCAGCAAAGGTTGGAGGGCGGGGTGATTTTTACAGGACAGGGGCAACAGAGAGGGGAGGGGAGGGGAGAAGGAAGAAAATGGGTAGATAAACTGTGATCTCACCATTTGCATGATACATGCTGATACATACATTGTTATACAACACATTTGAACACAGAAGCAGGTACATAGGCATTTAAACTGATGAAGTCTCATTCAATCATAACATAAACACATCTCCACTTTCCTTCCCTGCTTCCTGGAGCAGAGGACGTTCTGTTCTGAGAGCTATGCTTGCCTCTCCCTGGAATACCGTGGTACTTAATGGAAAAGGAGAAACACAAAAAAAATCACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTTGTCATGGTAACTGCTTTGCCTGCCAGGCAGGGTGCCCAGCAACCAGAGCATCTGGCAGTATCCAAAGGGACATCCTGTGGCCTCTACCCTCTGGGACTCTGCCACAGGCACCAGATGGGCATCTCCAGAAGATTTCTACTACAGAGGCTGCCAAAGCAGCCCCTTTGACCATGCCACCATGACCAGGGACATCTGGTAGCCAGGCCAGGGGGCCTGGCCTTCTTCATATGTCCCACTTTAAGTGCAACTCCTGACCCCTTTATACAACATAAACAGCACTTGCCATGAGTGGCCTCAAGACAACAGAGGTTAAACTTTAAAGACCTTTTTAAGACTATTACCAGGACTTTCCTGGTGGTCCGGTGGCTAAGACTCCAAGCTCCCAGGGCAGCTGGCCCAGGGTTTGATACCTGGTCAGGGAACTAGATCCCACATGCCACAACTAAGGCCTGGCACAGTCAAATAAATAAATTATACACACACACACACACACACACACACACACACACACACCATTACCTTCCCTTTCAGCATCTTGTCAGACATCCAAGAAGATCATCTATACTCACACAGGTTAGGTGTGTAACTAAGGCATACCAAAAATGTTTTAGTTCAGTGTGATTAAAGATTGGGTATAAGACAGATAAACTGCAGAGCACAGTCTCAGGATTCAAGTTCCTTTGACCTGAGTTTAATATTTTGATAAGGTTTTTAGAAGCAATCTCTCTTTTACACTTGCAGACTGGCTGTCTGACTTTGTACTCTAGCACCCCATTTTCCTTTTTTTCCTAGGCATTCAGGTTTAACCTCTTAGTTTCTGGCTTAAAATTCTCCCAACTGATTTTGGGCTTCCAGGGGATTTCTTTTCCCCTGGATTCTAATTCTTTAGCAGACAGCTGCTCTCTAGATCTCTCTCTACTTGGTGACATTGCCCACCATAGTTACTCCCCTTTTACAAGTTTCCCCTGCCCCATTTCTTCACCTCCTTTGATAATAATCTCCTGTGACTGATATTTGGCTTCAAGACCATACATCATAAAATTAGTCTCTCTGCATGCATTTTTATATATGACAATCTAAAAGGAAGGAGGGATGATGATAAACAATATAAATATGAAAAGGGATATTTATAACCTTTCTACATTTTACACCTTTTTAAAAATTTTACATATTATCCCAGAAAACCACAGGACATCAAGAAAAGCATAAGAAATAAGACTAATGATGGAAGGCTTGCCCTACTATATATTAAAATTTACTAAAGAGCTAAGGTTGCTAAAGCATAAGGCACTGATGTAGGAACAGATGTATCATTAGAACAGAATAGATAATCCCAAACTAAACTCCAGCAGAGGTGGGAATTTAATAGATGATAAAGGCACCATTTCAGATCCATTGGGAAAAAAGATAGATTAGTCAATAAATGCTTTCAGGACAACTGGATAGTCATTTATAAGAAGAAAAAAGATCAATCCTTTCTCATTCTTAGCCCCCAAATAAGTTCCAAATTGATGAAAACATTTTTAAAAAATTATAAAAGCCTTAGAAGAGAGAACAATTTGAAGGTATCTATTAGAAATTCAGATGCATATATTTTCTACTCTGGAATTCCAGTTTCTAATATTGACCCTAGAGAAGTACTTAAATGTACAAAGAGACATGATAAAGATTTGTTTATTGTATTACTGTTTAGAGAGAGAAACTGAACTCAACCTAAATATCCACCAGTAGGTTAGAAATTTAAAATGCTTTGATATAATATTCAGTTTAAAAGGATGGACTGGACTGTACATACCAATGTGAAAGATCTCCAAAACATGTAGTGTCATTAAAAGTTGCA TCONS_00103324 s 5' 0 TCONS_00103324 s 5' 0 EMBV3_40444 AGGTCACCATTGAGGGCCCTGAGGGGACCCCGCGGGCGAGCGCGACAAGAAGCTGGCAGC Variant GeneID:617703|UBE2S:NM_001076472:187_cdna 397^835 4 EMBV3_07769 GeneID:617703 18 GENE UBE2S NULL ubiquitin-conjugating enzyme E2S EMBV3_39138 AGGCGCCCACAGAAGTTAAAGCTGCTGCCATGGAACTTAATGATGGCACCCACTCTCAAT Gene GeneID:282876|NOS2:NM_001076799:188_cdna Constitutive 0 NULL GeneID:282876 19 GENE NOS2 NOS2A iNOS nitric oxide synthase 2, inducible EMBV3_40203 GTATACACACAAAATTTATCACCTAAAGAGGACTACAAAGCTGATGAAGACCCAGCGTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27098 CATAAAATAAGATCTGCTCTCTCAGACTCGCTCACACAAGGAAGCGCACTCCTGCCCTAC Gene BVV0102_331187 + 0 NULL GK000016.2:71090171-71149230 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068168 TCONS_00068177 TCONS_00068171 1 XLOC_041604 Coding TCONS_00068177 XLOC_041604 Coding Coding PPP1R12B 16:71061810-71093633 j TSS51097 2594 1 TCONS_00068177_2 390 13 0.918892590032053 0.0027037097876838 0.00113773359694137 0.00146621090444733 0.000567771889919722 0.000629336662549652 7.2091642219321e-06 0.00116973409614756 0.000641558472311979 0.000506006223311567 4.44119807801027e-05 5.06137074821647e-05 1.52044036976066e-05 2.11600941940043e-05 6.11522545517577e-05 6.77247916434582e-05 0.000208635755417513 3.26060106201087e-06 1.10831477867053e-05 0.00150672322967935 0.00119604280315764 0.000188654054490441 0.000370067866747525 5.86734176697497e-16 6.41480316348673e-05 0.000465411905173166 0.00109911369610457 0.00127313509444059 1.11068647899289e-05 4.72672892479744e-05 0.000124283875151766 XM_003587116.2 PPP1R12B PREDICTED: Bos taurus protein phosphatase 1, regulatory subunit 12B (PPP1R12B), mRNA. 0.0 2397 97.23 0.528141865844256 NM_001081307.1 Ppp1r12b Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 12B (Ppp1r12b), transcript variant 1, mRNA. 0.0 1130 78.29 0.528141865844256 TCONS_00068177_2 sp|Q8BG95|MYPT2_MOUSE MYPT2_MOUSE Protein phosphatase 1 regulatory subunit 12B; 0.0 536 75.52 0.98974358974359 5 coding CTGTAAGATTCATAGGCAAATCAGTGGTTCCTGACGTCGCTCTTGGATGACGTGATGAAACAGCACTTCAGCGATCACTGTCCTTGGCCTGCATTGACGAGAACCTGGACGTGGTGAAGTTTCTGGTGGAGAACGGAGCCAGCGTCAACCAGCAGGACAACGAGGGCTGGACGCCCCTGCACGCAGCAGCGTCCTGTGGCTACCTCAACATAGCAGAGTATTTCATTAACCATGGAGCCAGCGTGGGCATCGTCAACAGCGAAGGTGAAGTTCCCTCTGACCTTGCAGAAGAGCCTGCCATGAAGGACCTTCTTCTGGAGCAGGTGAAGAAGCAAGGGCTGGACCTCGAGCAGGCACGGCGGCAGGAGGAGCAGCAGATGCTTCAGGACGCCCGCCAGTGGCTCAACAGCGGCAGGATCGCCGACGTGAGGCAGGCGCGCTCGGGGGCCACTGCCCTGCACGTGGCTGCAGCCAAGGGCTACTCTGAGGTCCTCAGACTTTTGATTCAGGCTGGCTATGAGCTCAACGTCCAGGATCACGACGGCTGGACCCCTCTGCACGCAGCCGCTCACTGGGGCGTGAAGGAGGCTTGCTCCATCCTGGCGGAGGCCCTCTGCGACATGGACATCAGGAACAAGCTGGGCCAGACGCCGTTCGATGTGGCCGACGAGGGCCTGGTGGAGCACCTGGAGACGCTGCAGAAGAGACAGAGCGTGCTTCGAAGTGAAAAAGAGACACGGAATAAGCTAATCGAATCAGACTTGAACAGCAAGCTGCACAGCAGACTCTTTAAGAACAAAGAGAAGATGCTCTGTGAGGAGGAGACGCCCAAGTCCCAGCGAGTGGAGGAGAGCAAAGAGTCCAGCAGCTCCGGCTCCGAGGAGGACGAGGGCGAGGACGAGGCCGAGAAGGAGGCGGGGGGCCCCGAGGCCGATGACGGGCCGGGCTCCGTCCCCAGCCGTCCCAACTCTGACAACAGGAGCAGCGTCATGGAGCGGACCCCTGCAGCCCCGCAGAGCGCCGTTCCCGCCTCTTCAACCAGGAGACCCTCCAGCCTCTTCAGCAAGCCGGAAGAGACCAGGGACGAGTCTCCGTGTTCGTGGAGGCTGGGCCTCAGGAAGACTGGCAGCCAGAACGTGCTCAGCGAGGCTGCTGGGGCCAGGGAGGCCCTGCGGGACCGGGGCGCATCTGTCCACCGCTCGGCCTCCAGCCCCCGCATCTCCGCCCTGATGGACAACAGAGAAAAGGAGAGAGAAACCAGAAGCTCCTTGAGTTCACTGGGGCTGCGGAGGCCGGGCAGCACTAGCGACCTTGAGGAGAAGGAGAACAGAGAGTCGGCTGCTAACCTGGTGCGCAGTGGCTCCCAGCCCCGGCAGCCCTGGAGGGACGCAGCCAAGGGGAGCGAGACCCCGCAGACGGCCGCTCCCTCGACCTACGTGTCGACCTTCCTGAAAAGATCCATCAAGATGTGAAAGTCGCAAGTGTGGTGCAGAGAAGGTACCCGGGTATCCTGCCCCTTTCTCACCTGTATGCCCCTCTCTGCAGTTACTTTCTTTGCCATGTACCAGCCAGCAAGCAGCGCACCCCTGCCAGAGCCCTGAAGCTGTAAGACACAATTAATATTTCAGTTTAAACTTTGCTGCTCCTGTGGAAGAATCTGACTCTCGTGGCTTCTTCTGCATCCTCTCCTCACTCCCACTCTCTTGCCCTCCACCTGCCTCTTCGTGCCACAGTCTCCATCATTAGGCGTTTTGGTGCTTGGTCGGCTGCCTAGATACAGGCTTTGGCCACACACTATGTTTGGGATAAAAACTGTTTTCATTTGCTTGGAAGAATCTTATCAACCAGTTAACATCAGAACGTGGGCACCGTTCTGAAATCAGAGAGCCACTGTAGCCTTTTGAAACTTCAGCTCTGCAGATGTGTCCTGTAAGAGAAGGCTCAGCTTGGACAGCGTGCCTGCCCGGTTCAGGGATGCAACGGAAGCTTGTCCCACAGCCTCCATGCTTCTGGCTTTATTGAGGCTGTTGCCTGTTTGTCTTCAGGGGCGAGGCCTTAGTCTGAATAGATGCTTTCCTGCTCCTTATGGTTGGATCCAGGACTAAGAAAAGTTGTCAAGGAGAATAATGTCCTAGACCTTGGAGGGGCGAGGCCGTGTTCGCTCTTCAGGCCTGGTGGGGTACTGTGGCAGGCTGGGGCTTCCACGTCCACGTCTCAGCGGGCGCGTGGAGGGAGTAGTGTTTGGTGGGCAGATGTCGTCTGCACAGTCTTGGTGAGCCGAGAGCTTGGCTGGGGGGAGGGCCGCTTCTCTGTAGGGCGGGAGTGCGCTTCCTTGTGTGAGCGAGTCTGAGAGAGCAGATCTTATTTTATGATCTTTCAAAAGGAAAGAAACATACACAGTCGCTATTTCAGACAGAAAGCGCGAGGAGGTGTTTGTCATTCTTAGACTATGCCAACTCTCAGAAACTTCCCATTTGCTGTTCTACGCAGAAATTCCTTTTGTACAGCCAGTAAGATGTGTCTTTTGCCCAAGAAGTCTTCCTGACCATTTCTGCTCACACCCCCAGGTTGCTGTTATGGTCAAGTTTTTAAAT EMBV3_08308 GTCTAGTGGTATTTGCTGGAAGGACTTGGCCGCTCTGTGGAAGAGACGCTGAGACTAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24051 AGGACACCTCTCCCTGAGGATCCCGAGCCCAACCCTAACAGCAAGTACAGTTCTGAGAAT Gene BVT0102_347842 + 0 NULL GK000024.2:18181576-19819064 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139828 TCONS_00139823 TCONS_00139824 TCONS_00139829 TCONS_00139826 TCONS_00139825 TCONS_00139827 1 XLOC_084994 NonCoding TCONS_00139829 XLOC_084994 NonCoding NonCoding - 24:19815589-19818540 - TSS104501 874 1 TCONS_00139829_1 35 4 0.705084745762712 1.34030186927854e-10 4.63493898794923e-33 2.30160072381301e-05 0 6.47844370005525e-19 1.47424798279055e-16 9.29568950796297e-18 3.1648496803258e-21 0 0 0 0 0 2.24897636938295e-95 1.17181817383416e-77 0 0 0 0.00177787871812464 6.29927494136807e-10 1.30252524998637e-05 0 0 0 1.69625139911408e-38 1.03147793463594e-24 2.16017346954622e-05 0 0 0 0 noncoding GGCGCTGAGATTCCGGGCCCGGCGGCCGCGGGGAGCGGGTGCCAGTTAGGAACGGGGTTTCTGATCTCCTCGTTTGCGTTTTGGGGGTTCTTTTTGTTCATAGCAGCAGACTCGAAAAAGCGAGCCGGCTTGGAGGAAGTCCGCCCAGCGATCCGAGTGCGCATTGATCAGTGTCGAGAGAAAAAAAAGCTACATAAATATATATTATTTAAAGAAATGAGACCCTAGCTGCCTGAAAACCGAGACCCAGCCCGTTTGGTACAGCCACGACGCCGCCAAGCTCTCCAGCGCCGGAGGAGGCCCCGAGGTTCGCTGCCCCAGGCCCGGAGTCCAGCCAGGACACCTCTCCCTGACGATCCCGAGCCCAACCCTAACAGCAAGTACAGTTCTGAGAATTGTGGAACTTCATCCTTTCAGTTTAAGACACTCCTGCCTTTGCTTGATGGAATCTTGTAGGCTTGCAAAGACTCCTTGCTTCGTGCTTTTCTGCGCATCTGCCTCCTTCACCCTGGTTCCTCTTCACATCCGGACCCTGGACCTGAAGCTATGAAGAGCCTCTTCTTCCCTAAGGAAGGTTCCTGACTTTCCCCTCTCTCCCATCTGAGGACGGCTTATTTTGGATCTGGGCTGTCTTCCCTTGCACATTCTTCAACTTTTAGCTCCAGGGCAGGTGTGTGGTAAAACACCCCACCTCCCCCCAGCTTTCTGGGCCAGGAGCGGCTTCTGCCAAGGCAGGATCTCTTAAAGACGCAGTGAGGATCTCTTCGGCTCCCTCCTCTCAGCCACAGCTGAGAGATAGGGTTACCATGACACAGACATGTGTCTCAGAACATAAAGGGCCCCTGAGAAGACAGTAAAGAACGTGGTTCAGTTG TCONS_00138559 TCONS_00138560 TCONS_00138561 r 5' 3056 TCONS_00138559 TCONS_00138560 TCONS_00138561 r 5' 525 EMBV3_05336 CAGGAAGAATCATCATGTAATAGTCTCTAAAAACCTAAGGACCATAATTTCCTAACCAGC Gene GeneID:514143|LOC514143:XM_002686265:86_cdna Constitutive 0 NULL GeneID:514143 3 GENE LOC514143 NULL hypothetical LOC514143 EMBV3_21086 AACCAACTGCTGGCTTACAGAATCAGACTTGACCTACCTGTCCCAGAGCCCAAACATCAG Gene GeneID:617709|LOC617709:XM_002694087:338_cdna Constitutive 0 NULL GeneID:617709 16 GENE LOC617709 NULL similar to preferentially expressed antigen in melanoma EMBV3_12050 CGTGAATTCTCAAGTGCTGTTTTATGGGAAGACGGTGCAACAGACCAAGGCTAATGGACC Gene GeneID:517451|ZDHHC14:XM_002690363:6_cdna Constitutive 0 NULL GeneID:517451 9 GENE ZDHHC14 NULL zinc finger, DHHC-type containing 14 EMBV3_43745 CCCAAACAACACACATGCCAAGCATATAAAGACAGGAGGGTGGAAATATCTGAACGAGGC Gene BVV0102_229130 - 0 NULL GK000021.2:47306418-47309279 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119575 TCONS_00121431 TCONS_00119576 TCONS_00119578 TCONS_00119579 TCONS_00121434 TCONS_00121433 TCONS_00119580 TCONS_00121432 TCONS_00119574 2 XLOC_072928 XLOC_073411 Coding TCONS_00119579 XLOC_072928 NonCoding Coding PAX9 21:47297573-47309347 j TSS89520 3251 2 TCONS_00119579_3 109 0.027683789603199 2 0.724029559160792 0.00272477706776992 0.00287944013650351 0.00252621980558112 0.00247074710657299 0.00439294977458118 0.000702616485327829 0.00239313226742491 0.00269069261406517 0.00372410688759283 0.00258472919716766 0.0001543527984792 7.9224640589553e-09 1.33212795463901e-05 0.000126859931345708 0.00159224638583566 9.97693327605591e-05 5.87651505496134e-43 1.13490189137227e-33 0.00153632425388531 0.003454269348271 0.00216893886141254 7.40755934678012e-06 9.3793491709412e-05 4.62171316065314e-05 0.00392611141225307 0.00393405532661177 0.00262427789713676 4.05247528203692e-05 3.71203435336277e-10 0.000221585483747188 XM_005222042.1 SLC25A21 PREDICTED: Bos taurus solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 (SLC25A21), transcript variant 0.0 2412 100.00 0.410950476776376 NM_006194.3 PAX9 Homo sapiens paired box 9 (PAX9), mRNA. 0.0 1966 87.23 0.494617040910489 0 noncoding 1 0 1 1 -0.0384171482509517 0.756461069404387 -0.0807080640961705 0.124930722361938 ACAGTTCCCGCGCCCCGATTAAAGGTCACGTCGTCATCTCCCCAGGGAGGCACCAAACGGTCTCCCAGCTGTAAGCAGTTTTGTGTCAGCATCCAGCATGGCTCCTTATCCTACCCCGGCCCAAGTGTCGCCCTACATGACCTACAGCGCTGCTCCTTCTGGTTATGTTGCTGGACACGGGTGGCAACATGCCAGTGGCACCCCACTTTCCCCCCACAACTGTGACATTCCCGCATCGCTGGCGTTCAAGGGAATGCAGGCAGCCCGAGAAGGTAGCCACTCTGTCACAGCTTCCGCGCTCTGATGGGAGATTCTGTCTGCAGCAGCTTCGCCGTCTGCAGCAGCTTCGCCCGAGGAGTCTCCCTCTCAACACACCCTCCCCCCTTCCCTGGTCTCGGATCCCACCCCTCTACTCTCCAATCCTTTTGCCGGAAAGCTGGCGTTATGGACTCACCTCCTTTGTGCTGATGACACTTAAATATTTCTCGCCATAACTTCTCTCTCACAGAAAACCTGACATGACTTTAGGATTTAAAAAACAGAAGCGATGTTCAGGATTGAATGAGACGTTCGTGTTGCCCACGCACTGTTTTTAACGTAGAAACCTGCACCCCTCAAAGGGCTTAAGGAACTTTTCAAACTAGTCTTTGGTAAAACCACATGTGTATATTTATTCTAAATCAACCTGAACTTCTGAGACGTGCAATTGTTGAGATTCTGCAAAATCAATAAAAGAAAATACATATAGAAAAAGTTATGCTACACCCTCTAATCAAATAAGGTAATAAAATAAGCCTTAATTCATCATTAGGAAACCAATCAATAATTGACTTGAGTGATCCTTTATTTTTAACAGATGACCTATTTTGTTGGAAAATACATGTATAACTTAAGCAATATCTGAGTTCAGCTCCTCTGGTGTTTTGACTTGGTTCCAAATACAATAATGTTTATATTTTCTATTAGTTTGTAAATACGGACTCTGGATGGTGCATTTGTGTTTTCATTCCATGGGATAACCCCCTCCCTACTCCCCCCGCTTCTCTTTTTTTTTCCTTTTCTTTTTGCAAAGGTGACTTTCCGGCAACATCTTTGTCTCTGGTGGTGGGCTGCTCAGGCTCCTGGGCCTGGACTCGCCCCAGATTTTGTGTGTGCAGTGAAGGCTTCGACATCTCATGAAGGACATTTTCTTTCTACAACAGAGGACTCAAAAATACAGATAAAACAAGCCAGTCTCCCATTTTGTATCCCAAACAACACACATGCCAAGCATATAAAGACAGGAGGGTGGAAATATCTGAACGAGGCTCTAAAGGAAGTCACTTAGAAACTTAAGTTCAATGTGAAATGCTTCGCAAAGACACTTAAAATGAACTTTATGTTAAAGAAAACCACTGTGAAACTAAATTGTACTGTTATTGTTGGCTTACCTGTGTGTTCAGCAATCGCAGCCCAAAATTACATTGTAATTTAAAGAAAATGGAAAATTCCGCTCTAATGAATGTAAAAATGGCTTGCTGTGAAGTTTACATTGTTGTACAGAAGCATGTGTCTCGTGTAGGTAAACTGGTGATGGTTTTAGAAATACAGATGCTATTTAATTTTTAAAAATTCCCTTTATTCATTTCTGGACCTACAGGACATGGTTTAACTGATGGATCTTTTGAAACCAATCTTTTCACTTTAATGTTAATAATAGAACTGAGGGGGTATATGTTTGTGTGTGTGTGAGAGAGAGCATGTGATTTGTGATTATGTTTCATATTTTAAAACAACTGATTTTCTTGGGAAAAAATCTACAGTTTTAATCTCTTCTGTTTAGAAAGTTCTTCCTGCTTGGCAATATAGGCTTGAAAATACGTTTTTAAAATGTTGGTACAATTCATCTATTGGAAAATTAATATATTGTGGGGCTTTTTTTTTTGGTGTTGATTCTGTGCAATAACTAACAGAGCCCATCACTAGATATGGATGTTAGGTGGTTTTGATTTCTTCCTGTCTGGGCTGTGCACAGCCCACGGGGCAATCCACTTCTGTCACTTTGGTTTCATGGCCTCATTTAAAACTCAGATGGCTAGATTAGCCAGGTTTTCAAATCACTATGATATAAACAGTAAGCAGATTTCTGACATACAAGTTATGTTCGAGGAATTGCTTTTTTCAAGCAGCAGATATCTTGTAAAGAGCTTTGAACTGCATTTATTTCTAAAGCAACCGAAATTCAGTGCTACAAACAGAGGATTATAACTTCAGGAGAAGAATAAGCAGAAGGAGCAGATGAACTCTCAGGGCCATAGTCTTCCTTTGATCTTGTAAAACTCCTATTGACATCTGGAGTTCCCAGTCTGGTGAGAAAATAGAACTATAAACCAAATGAATAAAATACCAGTCCGATATTTGGTGGAAACTTTAAAACCATACGGTACAAGGACTCTCCTGCCATGCAGAAAACTGACACAAGGTACAGAATTATTCCTTATCAGATATTTTTAGGAGGCTATTAGGAGTCTTTAAGAAATATCAATAATTTGTATGGAAATACAACTGTTATTTTCCTTATCTAAATTAAGAAGTCTCTTGTTAATATGCTATTTATAATTTTTTCCTGATTCTTGTATCTTTAAAAATCTAATATTAATACTATAAAAGTTTTCCTTTTCTTTTTTCCCCTGGAGGCAATTTAGCATTCTTAGCAATGGTGAACTCACATGGAGTAAATTTTAAAAGATAAGAGAAAGCCCAAATACAATTTGCTATTCAAAGCACACTATGATTTAAAACTACTTTTAAAAATGAGAGAAGCAAAGTGGGAGGGGAGATGAGGTGGTTCGATTTTTAAAAACATTATTATTATTGGTTAACATTGACTTTTTTCCTCTGTTTCTTCCGGGGGTAAAAGTGTTTTTAACCTGGCAAATGCACTCTTCAGAGATCCTTTTCCATCCCATCCACTTGGAGAGGTTAAAGGTTCAATTTCATGGCCTCTATGGAGGCAGTGCTCTCTCTCACAGGATGCAAGAGATAGAATCACCTGCAAGGATAGAATGCAGTTGGACAACAGACACATTCTTACTTCTCTTGTTTTGTCCTACTTTTAGTGACCCTCTTATTAAGTATTGGGCTGAAATATAAATTAAAGAACACGTTGGAAAGGATGTACAAGTGAAGGCTGTGTATGTATATACAGTATGTCAAAAGCCTTTATTTTTATACTTCAAATGCTCTAAATTAATAAAAAGTAATAATTACCA EMBV3_30299 GACGATCCACACGCGAGAAAAACCCTATGAGTGTAAGGAGTGTGGGAAAGCCTACAGATT Gene GeneID:100139362|LOC100139362:XM_002688781:150_cdna Constitutive 0 NULL GeneID:100139362 7 GENE LOC100139362 NULL similar to zinc finger protein 709 EMBV3_19816 CTTCGGAATTGCGCCCACCGAGATCTTATTCTGCACCCTAAACAGCCACAAGGTGGACAT Gene GeneID:618265|GIPC3:XM_002688939:145_cdna Constitutive 0 NULL GeneID:618265 7 GENE GIPC3 NULL GIPC PDZ domain containing family, member 3 EMBV3_34387 GAAAGGCAGGCTTGCTGGGGAGCCCGCGATGAGTACTGGAAGTGTTTAGATGAAAATACA Gene GeneID:768072|LOC768072:XM_002698793:164_cdna Constitutive 1 NULL GeneID:768072 28 GENE LOC768072 MGC136999 MGC152595 hypothetical LOC768072 EMBV3_23820 CTTCTTGGTCAAGTGTCTAGTAAAAAGTTAGACTGTTATTTTCAAAATTACCAAACTTGC Gene BVT0102_138367 + 0 NULL GK000011.2:88490061-88584859 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025873 TCONS_00025867 TCONS_00025872 TCONS_00028729 2 XLOC_014843 XLOC_015562 Coding TCONS_00025867 XLOC_014843 Coding Coding LOC536267 11:88468113-88564246 j TSS18664 4727 1 TCONS_00025867_8 1349 30 0.9511400990305 0.00330685821385322 0.00098773287517337 0.00125597520249902 0.000463054502149887 0.00151762268525036 0.00060096024963867 0.000536368862380174 0.00141225064960988 0.000779096874551535 0.000361407335029028 7.30638160213064e-18 7.5651137553325e-85 5.03132468531971e-10 3.8257100416405e-279 0.000326677205769847 8.89970080187705e-123 4.25867633944023e-13 1.95303405436073e-183 0.000777198893984387 0.00216115820070083 0.000122786295185413 6.09357960804249e-138 2.56638186472549e-274 6.26244989704323e-93 0.00138806774687082 0.00157713401026799 0.000776898243215436 3.48479108166278e-46 1.13819285392817e-05 1.98572819615723e-59 XM_005213104.1 KIDINS220 PREDICTED: Bos taurus kinase D-interacting substrate, 220kDa (KIDINS220), transcript variant X5, mRNA. 0.0 7395 99.93 0.868415485508779 XM_005246172.1 KIDINS220 PREDICTED: Homo sapiens kinase D-interacting substrate, 220kDa (KIDINS220), transcript variant X4, mRNA. 0.0 5510 89.05 0.888301248148932 TCONS_00025867_8 sp|Q9ULH0|KDIS_HUMAN KDIS_HUMAN Kinase D-interacting substrate of 220 kDa; 0.0 2636 94.53 0.987398072646405 6 coding 0 0 0 0 0.478569591940326 0.233128916278903 -0.0943256317865324 0.114657364036611 GTCTCCCCGCCCCGCAGCCTAGCGTCACGTGATCTGTCAGTTCTGGGCGATAGCTTGAAAATGGCCGCCGGGTGTGGTGAGGGGAAGGCGTCGAAAGCCGCCGTCACCCCCTTTGTAGTCTTCTGACAGCACCTGCGGCAAAGCGGCTCCTTTCCGCCTCAGGGGTGGGCGCCGTTCTGGGGCCAGGTTGTGAGACGGTATTGGAATAAAGAAAACTATAGCTTTCTGTGAAAATGTCAGTTCTAATATCACAGAGTGTAATAAATTATGTAGAAGAAGAAAACATTCCTGCTTTGAAAGCTCTTCTTGAAAAATGCAAAGATGTTGATGAGAGAAATGAGTGTGGCCAGACTCCGTTGATGATAGCTGCTGAACAAGGCAATCTGGAAATAGTGAAAGAATTAATTAAGAATGGCGCTAATTGTAATCTGGAAGATTTGGATAACTGGACAGCGCTTATATCAGCCTCAAAAGAAGGGCACCTGCACGTTGTGGACGAGCTGCTCAAGTGCGGGGCCAGCTTGGAACACCGGGATATGGGAGGATGGACGGCTCTTATGTGGGCGTGTTATAAAGGCCGTACTGAAGTGGTCGAGCTGCTGCTTTCTCATGGTGCCAATCCAAGTGTTACTGGTCTGTACAGTGTCTACCCAATCATTTGGGCAGCAGGCAGAGGCCATGCTGATATAGTGCAACTTTTACTGCAAAATGGTGCCAAGGTCAACTGCTCTGACAAGTATGGAACCACCCCTTTGGTTTGGGCTGCACGAAAAGGTCATTTGGAATGTGTAAAACATTTATTAGCCATGGGAGCTGATGTTGATCAAGAAGGAGCTAATTCAATGACCGCACTTATTGTGGCAGTAAAAGGAGGCTACACACAGTCAGTGAAAGAAATTTTGAAGCGAAATCCAAATGTAAATTTAACAGATAAGGATGGAAATACAGCCTTGATGATTGCATCGAAGGAGGGACATACAGAAATTGTACAGGATCTCCTTGACGCTGGGACATATGTGAACATACCTGATAGGAGTGGAGATACTGTCTTAATTGGTGCTGTCAGAGGTGGTCATGTGGAAATTGTTCGAGCACTTCTCCAAAAATATGCTGATATCGACATTAGAGGACAGGACAGTAAAACTGCCTTGTATTGGGCTGTTGAGAAAGGAAATGCAACAATGGTGAGAGACATCTTACAGTGCAATCCTGACACTGAAATATGCACGAAGGATGGCGAAACACCCCTTATAAAGGCTACCAAGATGAGAAACATAGAAGTGGTAGAGCTGCTGCTGGATAAAGGAGCCAAAGTGTCTGCTGTCGATAAGAAAGGAGACACCCCTCTGCACATTGCTATTCGTGGGAGGAGTCGGAAACTGGCAGAACTCCTTTTAAGAAACCCCAAAGATGGACGGTTACTGTATAGACCCAACAAAGCAGGCGAGACTCCCTACAATATTGACTGTAGCCATCAGAAAAGTATTTTAACTCAAATATTTGGAGCCAGACACTTGTCTCCTACCGAGACAGATGGTGACATGCTTGGTTACGATCTGTACAGCAGTGCCCTGGCAGATATTCTCAGTGAGCCTACCATGCAGCCGCCCATTTGTGTGGGCCTGTATGCACAGTGGGGAAGTGGTAAATCCTTCTTACTCAAGAAACTAGAAGATGAAATGAAAACTTTTGCAGGACAACAGATTGAACCTCTGTTTCAGTTTTCATGGCTTGTGGTGTTTCTGACCCTGCTCCTTTGTGGAGGGCTTGGTTTATTGTTTGCTTTTACAGTAGACCTAAATCTTGGAATTGCAGTGTCATTGAGCTTCTTGGCTGTTTTGTATATATTTTTTATTGTCATTTACTTTGGTGGACGGAGGGAAGGAGAGAGTTGGAATTGGGCCTGGGTCCTCAGTACTAGATTGGCAAGACATATCGGCTATTTGGAGCTCCTCCTCAAATTGATGTTTGTGAACCCACCTGAGCTGCCAGAGCAAACCACTAAAGCTCTACCTGTGAGGTTTTTGTTTACAGATTATAATAGACTGTCCAGCGTAGGTGGGGAAACTTCAATGGCTGAAATGATCGCCACCCTCTCGGATGCTTGTGAAAGAGAGTTTGGCTTTTTGGCAACCAGGCTTTTCCGAGTGTTCAAGACTGAAGATACGCAGGGTAAAAAGAAATGGAAAAAAACGTGTTGTCTCCCATCTTTTGTCATCTTCCTTTTCATCTTTGGCTGCATTATTGCTGCGATTACTCTTCTGGCTATATTCAGAGTTGACCCGAAGCATATGACAGTGAATGCTGTCCTCATATCAATTGCGTCCATAGTGGGGTTGGCGTTTGTGCTGAACTGTCGAACATGGTGGCAGGTGCTGGACTCACTTCTGAATTCTCAAAGGAAACGCCTCCATAATGCTGCCTCCAAACTGCACAAACTGAAAAGTGAAGGATTCATGAAAGTTCTTAAGTGTGAAGTGGAATTGATGGCCAGGATGGCAAAAACCATTGACAGCTTCACTCAGAATCAGACAAGGCTGGTGGTTATCATCGATGGGTTAGATGCCTGTGAGCAGGACAAAGTACTCCAGATGCTGGACACTGTCCGAGTTCTGTTTTCAAAAGGCCCATTCATTGCCATTTTTGCAAGTGATCCACATATTATCATAAAGGCAATTAATCAGAACCTCAATAGTGTGCTTCGTGACTCAAACATCAATGGACATGACTATATGCGCAATATAGTTCATCTGCCCGTTTTCCTCAACAGCCGGGGACTAAGCAGTGCAAGAAAATTTCTTGTAACTTCAACAACTAATGGAGATGTTCCATGCTCGGATAATACAGGGATGCAGGAAGATGCTGACAGAAGAGTTTCACAAAACAGCCTTGGAGAGATGACAAAACTTGGTAGCAAGACGGCCCTCAATAGACGGGACACTTACCGAAGAAGGCAGATGCAGCGCACGATTACCCGGCAGATGTCCTTCGACCTCACGAAACTGCTGGTTACGGAGGACTGGTTCAGTGACATAAGCCCGCAGACCATGAGGAGACTGCTCAACATTGTTTCTGTGACAGGACGATTACTGAGAGCCAACCAGATAAGTTTCAACTGGGATAGGCTTGCTAGCTGGATCAACCTAACTGAGCAGTGGCCGTACAGAACTTCATGGCTCATATTGTATTTGGAAGAGACCGAAGGTATCCCAGATCAAATGACATTAAAAACCATCTATGAAAGAATATCAAAGAATATTCCAACAACTAAAGATGTTGAGCCACTGCTTGAAATAGATGGAGATATAAGAAATTTTGAAGTGTTTTTGTCTTCAAGGACCCCAGTTCTTGTGGCTCGAGATGTGAAAACCTTTTTGCCATGCACTGTAAATCTGGACCCCAAACTGCGGGAGATTATTGCAGATGTTCGTGCTGCAAGAGACCAGATTAATATCGGAGGACTTGCGTATCCCCCGCTACCTCTGCACGAGCCTCCCCCTCGACCGCCGTCCGGCTACAGTCAGCCAGCGTCTGTCTGCTCTTCGTCCACCTCCTTCAATGGGCCATTCGGGGGAGGGGTTGTGTCGCCGCAGCCTCATAGCAGCTACTACAGCGGCATGACAGGACCCCAGCACCCCTTCTACAACAGGCCATTCTTTGCCCCCTACCTTTACACGCCAAGGTACTGCCCTGGCGGCTCCCACCATCTCATCTCACGTCCATCAGTAAAAACGAATTTGCCCAGAGATCAGAGCAATGGCCTAGGATCAGGCCCAGCCTCAGGCACAATACCACTGAATTCGATGAACGTGGATGCAGTTTGTGAGAAACTGAAACAAATTGAAGGGCTGGACCAGAGCATGCTGCCTCAGTACTGTGCAACCATCAAAAAGGCGAACATAAATGGCCGTGTGTTGGCTCAGTGTAACATTGATGAACTGAAGAAGGAAATGAATATGAATTTTGGAGACTGGCATCTTTTTAGAAGCACAATATTAGAAATGAGAAATGCAGAAAACCAAGTGGTCCCTGAAGACCCACGTTTACTGAGTGAAAACAGCAGCTCTGTTCCTCACGGTGAACCTGCTCGTCGCTCCGCACACAGCGAGCTGCCCCACACCGAGCTCTCCAGTCAGGCTCCCTACACCCTGAACTTCAGCTTTGAAGAGCTGAACACGCTCGGCCTGGACGAAGGGGCTCCTCGCCACAGCAACCTGAGTTGGCAGGAAGAAAATGCTGCCTTTGAGATAGATAGATCTTCCGAGGGATCCAGTTTAAGCTAAGGCGACAGGGGCTCTAAGTCTTAGTACCCTGCTCATAGACCATTCCTTCTGACAATTCGGTTACCTTCTCACAGTTGTTGGCTCCTCACCAAATACAAGGGGGTAAAGAAGAGACCACCTACTACTCAGTGACCCTGCTTCCGGTTGGTTGAAGAAGAGAGATTTGTTACTTCTACCAGTTTTCTTTGTTCCACATAGTTGTAAAATTTGAATTTGATGAAGTGTTTCTTTTAGAAAATTTTAGGTAAAAGCCTGAATGTATAGCAAAATGCATGTAAATAAACTCCTATATAACTTGACATTTCTTATATCATCTTCTTGGTCAAGTGTCTAGTAAAAAGTTAGACTGTTATTTTCAAAATTACCAAACTTGCACTCTTTAGTTGTGTTTCAGAGAATTTATAGACTGTATATTGTTATACTTAATGCAAATTAAACTCTTTT EMBV3_31788 AGCCTCTATCCGGCCGACTTCAACATCCAGGTTTGTGAATTTCCCAGATCAGCCGGTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18637 GCCCGAAGCCTTCCAGGGTTCAGAGCTCTACAAGCCTTGGCTCTGGCTGAGAAAGCACCA Gene BVT0102_179825 + 0 NULL GK000015.2:75884489-76096607 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43075 TGCTCACCAGGTACTCAGGCCCCGGCTCCAGAACACTACTGTAACAACCAACCCTATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33666 CTAGGGATCAGCAGGCGAAGTGCTTTATTCAAGGTCTAGTTCTTACACCAAACCCAAGCC Gene BVV0102_193756 + 0 NULL GK000019.2:26961246-26968015 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12646 TAGGGGATGGTCACAGTAGCACATAATTTGACAGTGCTGGAAACCTTAGGGAGACATGGG Gene GeneID:504393|TMEM25:NM_001083639:77_cdna Constitutive 0 NULL GeneID:504393 15 GENE TMEM25 MGC151669 transmembrane protein 25 EMBV3_21661 GGCTTAAGGAACGATGAGTTGATATTCTTGGCATTGCTTGAATCAGATGGTTCCACCTAG Gene GeneID:539718|SCN2A:NM_001144109:127_cdna UTR3_Alt 2 NULL GeneID:539718 2 GENE SCN2A SCN2A1 sodium channel, voltage-gated, type II, alpha subunit EMBV3_35840 CATGCAGAAGTATTTCAAACTTGTTCTGAGGTGGCCTTAGAGATGCTCTTCACTGGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34103 TGAAGGAGCCACTCTGGCTGAAAATAAAAGGTCCTAATGTCTCTTCATGAAATGTTCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07076 GCACTTGGACCTTCCCGAGGCCCTAAGAGCATGTTGGCTGCATATTTATGCTCAAAATAA Gene GeneID:513536|C13H20ORF43:NM_001075625:1030_cdna Constitutive 0 NULL GeneID:513536 13 GENE C13H20ORF43 MGC140643 chromosome 20 open reading frame 43 ortholog EMBV3_26967 CCAGTGGTTGGATTCTGTATTTTTGCGGTATGCATGGGCCTTCCCAAGAGGGATGCGTCA Gene GeneID:526582|TTPAL:XM_002692467:523_cdna Constitutive 0 NULL GeneID:526582 13 GENE TTPAL NULL tocopherol (alpha) transfer protein-like EMBV3_35002 GGCATTGGGAAGTGCTAACCCATGTCGAAACAACTAAACCACGTACGGAAACACTCACAC Gene GeneID:515046|ARV1:NM_001035302:81_cdna Constitutive 1 NULL GeneID:515046 28 GENE ARV1 MGC127960 ARV1 homolog (S. cerevisiae) EMBV3_12437 CACAGTCTGGAATTAGTGGAACTTATTCTCGTTATAGGTTGAGTCCTCAAACAGTAACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21512 CCAACTTCGATTATCTGCTTCAGAACTATGGGACTTCTTGGCAGAAGGCGTGTTCACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13821 ACGCAAGAGAAAAATCCACTGCCTTCGAAAGAAATGATTGAAGAGAAGCAAGTAGGCGAG Gene GeneID:100140827|LOC100140827:XM_002699558:52_cdna Constitutive 0 NULL GeneID:100140827 X GENE LOC100140827 NULL similar to thymosin, beta 4 EMBV3_20492 TATTATGTGACGGAACGACGTGCCATTTCTACTTCTTGATCTGCTGGGAAGGGTGGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40793 CTCTTAGATAGTAACAGAAGGGAACAGTTGGATTAAGAACTTAGGCCTTAGCTTACATGG Gene GeneID:788978|ARHGAP5:XM_002696718:130_cdna UTR3_Alt 2 NULL GeneID:788978 21 GENE ARHGAP5 NULL Rho GTPase activating protein 5 EMBV3_16233 AAATCAAGTATGAGGAGCTGCAGACACTGGCTGGGAAGCACGGGGATGACCTTCATCTCA Gene GeneID:515823|LOC515823:XR_083785:422_cdna Constitutive 0 NULL GeneID:515823 10 PSEUDO LOC515823 NULL similar to Keratin 8 EMBV3_10350 CTCTTGTTTCCCAAAGTTGACCTAGATGTAACCTGGGTGTGGTGGGCTGAAACCTTCCTA Gene BVV0102_337229 + 1 EMBV3_37364 GK000030.2:54369756-54537622 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246957 TCONS_00246953 TCONS_00246954 TCONS_00246955 TCONS_00246958 TCONS_00246959 TCONS_00246956 1 XLOC_151176 Coding TCONS_00246954 XLOC_151176 Coding Coding SYTL4 X:54536267-54575923 j TSS185043 3643 1 TCONS_00246954_3 671 0.0430963491627779 17 0.90856134157105 0.000976955471262686 0.000819784193945333 0.000403550486333003 0.000479518120591808 0.000849077412591161 1.31780281903111e-07 3.55971698360919e-13 0.000281836078236074 0.00104640933423502 0.000526040890922436 0.000101681272533157 8.05367017857064e-06 3.0349651637932e-26 0.000192556697399238 0.000186566754177201 0.000298486066578506 2.05366010687087e-110 4.36218045109999e-05 0.000451933588474491 0.000697113168302912 0.000102369726982593 0.000216604004438752 0.000383628879803351 0.000304745620956137 0.000515231256071731 0.000150378724950192 0.000404444998355448 4.80043772026349e-05 3.68078740983728e-12 0.000119208932648779 XM_005227785.1 SYTL4 PREDICTED: Bos taurus synaptotagmin-like 4 (SYTL4), transcript 0.0 6570 100.00 0.999725500960747 XM_005262227.1 SYTL4 PREDICTED: Homo sapiens synaptotagmin-like 4 (SYTL4), transcript 0.0 3442 85.66 0.800439198462805 TCONS_00246954_3 sp|Q96C24|SYTL4_HUMAN SYTL4_HUMAN Synaptotagmin-like protein 4; 0.0 1257 92.40 0.998509687034277 2 coding 0 1 1 1 0.00756097278690929 0.960598421499969 -0.0161387194371025 0.730790601456974 AGATTCTTTACCATCTGAGCCACCAAGGAAGCCACCAACCGAACTAAAGGCAAATCTGGTGGCCTGGTAGATTTGAAGAAAGAAGAGTAGAAGGAAAAACTAGGACAAGTCATGTCGGAGATACTTGATCTCTCTTTTCTGTCTGAGGTGGAAAGGGATTTGATCCTCAGTGTTCTACAAAGAGATGAGGAACTCCGAAAAGCAGATGAGAAAAGGATTAGGCGACTGAAGAATGATTTACTGGAGATAAAAAGGAAAGGGGCCAAAAGGGGCAGCCAGCGCTATAGCAATCGGACCTGCGCCCGGTGCCAGGAGACCCTGGGCCGTTTGACTCCCAAGACCAACACTTGTTGGAGTTGTAATCATCTGGTGTGTCGGGACTGCCGCGTTCAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGAAATAGAGCTGAAGAAAGCAACTGGAGACTGGTTTTATGACCAGAAAGTGAATCGCTTTGCTTACCACACCGGCAGTGAGATAATCAGGATGTCCCTGCGCCACAAACCTGCAGTGAATAAAAGAGAGACAGTGGAACAGTCTCTCCTTCATCAGTCACAATTGGGTGATATCTGGCCAGGAAGAAAGATCATTCAGGAGCAACAGAAGGAGCCCAGCATGTCATTTGAAGTGCCCAAGCTGAAAAGTGGAAGGAGTGTACTGGAAGCCGAGAGTGAGAGCCTGGATAGCTATACAGCTGACTCGGATACCATGTCCAGGAGAGACTCACTGGATAAATCTGGCCTTTTTCCAGAATGGAAGAAGATGTCTGCTCCCAAACCTCAAGTAGAAAAGGAAGCTCAGCTTAGGGGTCAAAATGTGGTATCTGTGGACGAAGGTGAAATGATATTCAAGAAGAACACCAGAAAAATCCTCAGGCCTTCAGAATATACTAAGTCTGTGATCGATCTTCGTCCGGAAGATGTGGGGCATGAAAGTGGCGCCCTGGGAGACAGGAGCAAATCTGTCCCAGGCCTCAGTGTGGATATGGAAGAGGAAGAAGAAGAAGAAGACATTGACCACCTGGTGAAGTTGCATCGTCAGAAGCTAGCCAGAAGCAGCATGAGAAGTGGTTCCTCCATGAGTACGATTGGCAGCATGATGAGCATCTATAGTGAAGCCGGTGATTTCGGGAACATCTTTGTGACTGGAAAGATTGCCTTTTCTCTGAAGTACGAGCAGCAAACACAGGCTCTGGTCATTCACGTGAAGGAGTGCCAACAGTTGGCCTATGCTGATGAAGCCAAGAAGCGCTCAAATCCATATGTGAAGGCTTATCTTCTGCCAGACAAATCCCGCCAAGGAAAAAGAAAAACCAGCATCAAGCAGGACACTATTAATCCGTTATATGATGAGATCCTCAGATATGAAATCCCAGAATCTCTCTTGGCCCAGAGGACTTTGCAATTCTCGGTGTGGCATCATGGTCGTTTTGGCAGAAACACTTTTCTTGGAGAGGCAGAGGTCCAGATGGATTCCTGGAAGCTTGATAAGAAACTGGATCATTGTCTCCCTTTACATGGAAAGATCAGTGCTGAGTCCTCAACTAGCTTGCCAGCACACAAAGGCGAGTTGGTGGTTTCATTGAAATATATCCCAGCCTCCAAACTCCCCGTTGGAAGTGACCGGAAAAAGAGTAAAGGTGGGGAAGGGGGAGAGCTCCAGGTGTGGATCAAAGAAGCCAAGAACCTGACAGCTGCCAAATTAGGAGGGACTTCAGACAGCTTTGTAAAGGGATACCTCCTTCCCCTGAGGAACAAGGCCAGTAAGCGTAAAACTCCTGTGGTGAAGAAGACTCTGAATCCCCACTATAACCATACATTTGTCTACAATGGTGTGAGGCTGGAAGATCTCCAACACATGTGCCTGGAACTGACTGTGTGGGACCGGGAGCCCCTGGCCAGCAATGACTTCCTGGGTGGGGTCAGGCTGAGTGTCGGCACAGGGATCAGTAACGGGGAAGTGGTGGACTGGATGGACTCGACTGGGGAAGAAGTGAGCCTGTGGCAGAAGATGCGACAGTACCCAGGGTCTTGGGCCGAAGGGACTCTGCAACTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGCTTGTGAGCCCTGTCCTGCTCTGCAGGTCCATCCCTGTCCAGGGCAAGTCAGAGGAAGCGAAGAAACCAAGGGCGAAGATTTATAATTTGTGTGTGTGTGTGTGTGTGATGTATGTGTGTGTATATAAATGTGTATTTCTACAGATCTCATTATGCTAGAGTGATGTAGACTTCCCCTTTTTAAAGCAGGCTTAAGAATAAGGGTCTCTTCAAAATATTTTTATTTGTGCATTAACTACTATATATTTTCAGAATCCATGATTCTTACATCTTTATGAGATTTAATTAATTTATCTTTTAAAACAACTTTTTAATCGCCTGTCTTGCTATCCTGGTTCCTCCTTCCACAGGAAGCCCTGGCTGCCTTTGGCACTTGTACTGGTCTGTGTTTCAGGGTGTGCCTGGTCTGAGGCCAAGGCTCTGGGAAGCAGGGGTGGTTTACTAAAGACAGAAGAAGATTGGAGAGAGGTGACTGGGTCCCTTCTTTCTTCACCGCTTTATGCTTTTCACTCCATTTCTACCTTGACACATTTCTGAAACTTGGCTTTTAACTCTTGTTTGGAGCAGTTTCTGCCTTGCTTGGGTCTAATAGTTTTCCTGGAAATGCTGAGAAGATGTCTAAGTTGCTTCCAGTTCTGAACACCTTCCCTAGACCTCTGCAGGACCCTTATAATAGAGTTGCTTTAGAAGAGCACTTTAATTAGATAATGGCCTTTGGACTAGGTCACAGGCATGCACAGTACAGGCTTCTCAGTGGTCCCAAAGGACCAGCAATGGAGCATCTCTCAGCCCGTGCTGATTCTTTGCATTTTAAACTGATATAGCAGTCGTTAGAAAGCTCCTATGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTAGTAGGCTGCAGTCCATGAAGTCGCTAAGAGTTGGATATGACTGAGCACTGAACTGAACTGTTATATCAGCCTGAATAGCCAGCTATGGTCTAAACCAGTCCAGTGTTTTCTCTGTGCTGGGCGCTGTTAGTGTCCAAGAGAGTGTGTTCAGAGAACACAGCTTTTCTGACCTCTTTCTTGAAGTGGTTTCAGTTCCTATTTTTTTCTCTTGTTTCCCAAAGTTGACCTAGATGTAACCTGGGTGTGGTGGGCTGAAACCTTCCTAAGAAGGGTCTATTGACCTAAGGTTTATTTTCTGAAACCCACTGTCCCAAACTGACCTTTTAATTCTCACAATTGTACCTTCCCAAAGTCATCTGTAAAGGGAATCTATACTGGAGAAGAAGTTCCTTTCAGTAGAGTCAGATGCCAGCTGCCTGTCCTATGAGGCTGTGGGATTGAGGGTGGATACTGTGGTTTCTGTTGTATGTGTGAAGTGAACAAAATAGTATTTGGTGTGGATTAGTATTGTACTGGAAAGCATAACTTGGGATCCTGGACTGTCACTTGCTCCTTTGTTCTCCATCCCCCCTGAAATGTCTGTGTGCTTCAATAAAACTTTCTTCCTTGTCAA EMBV3_14900 AGGTGTGTGCAGTTACCTTTTGAGCTTGGAACAGGCAGACTGGAATTTTCCTCTGCTACC Gene BVV0102_182153 + 0 NULL GK000003.2:91867291-91901852 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170640 TCONS_00170644 TCONS_00170642 TCONS_00170646 TCONS_00170645 TCONS_00170638 TCONS_00170637 1 XLOC_103622 Coding TCONS_00170644 XLOC_103622 Coding Coding USP24 3:91711044-91869337 j TSS127452 11245 1 TCONS_00170644_9 2148 67 0.929383670684558 0.000478969772605616 3.77823004971296e-08 0.000735560005084615 0.000112338711165438 0.00067411141865731 0.000180433230198182 0.000166866158882034 5.84563559385842e-16 0.000520621649013255 9.12778228963718e-12 6.63372575033216e-15 1.66612389189265e-06 6.57697627393034e-05 3.47886136596511e-11 0.000129453072376038 0.00440902988444363 0.00237108169513422 0.00127068079225229 0.000450880157409512 0.00140244753836923 0.000330481843753835 9.46564319115766e-10 2.60240590134572e-08 0.00133517928630548 0.000706082370150453 0.0016863556380345 0.000271875624385972 3.51613908290375e-05 4.07869753764758e-09 0.000299591750257264 XM_002703981.3 USP24 PREDICTED: Bos taurus ubiquitin specific peptidase 24 (USP24), 0.0 1.162e+04 100.00 0.572698977323255 NM_015306.2 USP24 Homo sapiens ubiquitin specific peptidase 24 (USP24), mRNA. 0.0 9582 92.94 0.572610048910627 TCONS_00170644_9 sp|Q9UPU5|UBP24_HUMAN UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24; 0.0 4167 98.23 0.999068901303538 2 coding 0 1 0 1 0.0200276227688796 0.843914379898932 -0.00734705560113179 0.879747887931575 ATGGAATCGGAGGAGGAGCAGCACATGACCACGCTGCTGTGCATGGGCTTCTCGGACCCCGCCACCATCCGCAAGGCCCTGCGCCTGGCCAAGAACGACATCAACGAAGCCGTGGCGCTGCTCACCAACGAGCGGCCGGGCCTCGACTACGGCGGCTACGAGCCGATGGACAGCGGTGGCGGCCCCAGCCCCGGGCCCGGCGGGGGCTCGCGGGGCGACGGCGGCGGCTGCGACGGCCCCTCCCGCGGCGGGAGCACCGGAGGCGGCGGCGGGTTCGACCCCCCGCCCGCGTACCACGAGGTGGTGGACGCCGAGAAGAATGATGAAAATGGAAACTGCTCAGGGGAAGGAATTGAATTCCCTACAACAAATTTATATGAACTGGAAAGCCGCGTTTTGACAGATCACTGGTCCATACCTTACAAGCGGGAAGAGTCACTAGGCAAATGCCTGTTGGCGTCTACCTACCTAGCAAGACTTGGTCTTTCCGAGTCTGATGAGAACTGTAAAAGATTTATGGATAGGTGTATGCCTGAAGCGTTTAAAAAGCTCCTGACATCAAGTGCTGTTCACAAGTGGGGTACTGAAATTCATGAAGGGATCTACAACATGTTGATGCTATTAATAGAACTGGTTGCAGAAAGAATAAAACAAGATCCAATTCCCACTGGTCTGCTGGCTGTGCTTACAATGGCTTTCAATCCTGATAATGAATACCATTTTAAAAACAGAATGAAAGTGTCTCAAAGGAATTGGGCAGAAGTATTTGGAGAGGGAAATATGTTTGCTGTTTCACCTGTATCTACTTTCCAAAAGGAGCCTCATGGATGGGTTGTGGATTTGGTAAATAAGTTTGGAGAATTAGGTGGATTTGCAGCAATCCAAGCCAAGCTTCATTCAGAAGATATAGAACTTGGGGCAGTCTCAGCACTAGTGCAGCCCTTAGGGGTATGTGCAGAGTACCTCAATTCCTCAGTGGTACAGCCCATGCTAGACCCAGTCATCCTTAATACAATCCAGGATGTGCGGAGTGTGGAGGAAAAGGACCTCAAAGACAAGAGATTGGTTAGCATCCCTGAGCTCTTGTCTGCCATCAAGTTACTTTGCATGCGCTTCCAACCAGATCTGGTGACCGTGGTGGACGACCTTCGACTAGACATCCTGCTGCGCATGCTGAAATCACCACATTTCAGTGCCAAAATGAATTCCCTCAAAGAAGTAACCAAACTCATAGAAGATAGCACTTTATCCAAATCTGTGAAGAATGCTATAGATACAGACAGATTGTTAGATTGGCTAGTTGAAAATTCAGTTCTGTCAATCGCATTGGAAGGCAACATAGACCAAGCACAATACTGTGATCGTATAAAGGGAATTATTGAACTCTTGGGCAGTAAACTGTCATTAGATGAGCTCACTAAAATTTGGAAGATACAGTCAGGACAATCATCTACTGTGATTGAGAACATTCATACTATTATTGCTGCAGCAGCTGTCAAGTTTAATTCAGATCAGCTTAATCATTTGTTTGTTCTTATTCAGAAGAGCTGGGAGACTGAGAGCGATAGAGTGAGACAGAAGCTATTGAGCCTTATTGGACGAATAGGCCGGGAAGCTCGCTTTGAGACCACTTCTGGAAAGGTGTTGGATGTGCTCTGGGAACTGGCTCATCTCCCCACGCTGCCCAGTAGCCTTATTCAGCAAGCTTTGGAGGAGCATCTGACAATCCTTAGTGATGCGTATGCAGTGAAAGAAGCAATCAAGAGGAGCTACATAATTAAATGCATAGAAGATATTAAAAGGCCTGGAGAATGGTCAGGTCTGGATAAAAACAAGAAGGATGGATTCAAGTCGTCTCAGATTAACAATCCCCAGTTTGTATGGGTGGTACCAGCTTTGCGTCAGCTACATGAAATCACCCGCTCGTTCATAAAACAAACCTATCAGAAGCAAGACAAGAGCATTATTCAAGACTTGAAGAAAAATTTTGAAATAGTAAAACTGGTAACAGGAAGCTTGATAGCTTGTCATCGGCTTGCAGCAGCCGTGGCTGGACCTGGAGGCTTAACTGGCTCAACGCTAGTGGATGGTCGATATACCTACCGGGAGTATTTAGAAGCCCATCTTAAATTCCTGGCATTTTTCTTGCAAGAAGCTACTCTGTATTTGGGTTGGAATCGTGCCAAGGAAATCTGGGAGTGTCTTGTGACTGGCCAGGATGTTTGTGAATTAGATAGAGAGATGTGTTTTGAATGGTTTACAAAAGGGCAACATGATCTTGAGAGTGATGTTCAGCAGCAGCTCTTCAAGGAGAAAATTCTTAAATTGGAGTCATATGAAATCACTATGAATGGTTTTAACTTATTTAAGACTTTTTTTGAAAATGTGAATCTGTGTGATCATCGATTAAAAAGACAAGGAGCTCAGTTGTATGTAGAAAAACTGGAATTGATAGGAATGGATTTCATTTGGAAAATAGCCATGGAATCACCTGATGAAGAAATTGCTAATGAGGCTATTCAATTAATTATAAACTACAGTTACATTAATCTAAATCCTAGGTTAAAGAAGGATTCTGTATCATTACATAAGAAATTCATTGCTGATTGCTACACAAGATTAGAAGCAGCCAGTTCGGCACTTGGTGGCCCCACTCTGACACACGCTGTGACCAGAGCAACAAAAATGCTGACAGCCACTGCCATGCCAACCGTAGCCACGTCAGTCCAGTCTCCTTACAGATCCACTAAACTTGTAATAATTGAGCGATTATTGCTTCTGGCAGAACGTTACGTGATCACTATAGAGGATTTTTACTCTGTCCCCCGAACTATTCTACCTCATGGTGCCTCATTCCACGGACATCTTTTAACTCTTAACGTTACTTACGAGTCTACCAAAGATACCTTCACTGTAGAGGCTCACAGTAATGAAACTATAGGGAGTGTCCGGTGGAAGATAGCCAAGCAGTTGTGCTCTCCAGTGGACAGTATACAGATATTTACAAATGATAGTCTGCTGACAGTGAATAAAGATCAAAAGCTACTCCACCAGCTGGGCTTCTCTGATGAACAAATCCTCACAGTGAAGACTTCTGGCAGTGGGACACCATCTGGGAGCTCCGCAGATTCCTCAACCAGCTCCAGCAGCAGCAGCAGCGGGGTGTTCAGCTCATCATACGCCATGGAGCAGGAGAAATCCCTCCCTGGTGTGGTGATGGCGCTTGTGTGTAATGTATTCGACATGCTTTACCAGCTGGCCAATCTAGAGGAGCCAAGGATAACTCTACGAGTACGAAAGCTTCTGCTCTTGATACCTACTGATCCAGCCATTCAGGAAGCCCTTGATCAACTTGATTCTTTAGGAAGAAAGAAAACATTACTGTCTGAAACAAGTTCTCAGTCTTCAAAGTCTCCATCCCTGTCTTCTAAGCAGCAGCATCAGCCAAGCGCCAGTTCAATTTTAGAAAGTCTATTTCGATCTTTCGCTCCAGGAATGTCCACCTTCAGAGTGCTCTACAACTTAGAAGTTCTAAGCTCCAAACTCATGCCAACAGCTGATGATGACATGGCAAGAAATTGTGCAAAATCATTTTGTGAGAACTTCCTCAAAGCAGGAGGTTTGAGTTTGGTTGTAAATGTCATGCAGAGGGATTCCATCCCATCAGAAGTAGACTATGAAACAAGGCAAGGCGTTTATTCCATCTGTCTACAACTGGCAAGATTTTTACTCGTGGGACAAACATTGCCAACCTTATTGGATGAAGACCTCACCAAAGACGGCATAGAAGCACTTTCTTCTCGCCCATTCCGAAATGTCAGCCGGCAGACGAGCAGGCAGATGTCCTTATGTGGCACCCCAGAGAAGTCATCCTACCGACAGCTGTCAGTGTCTGACCGGTCTTCCATCAGAGTTGAGGAGATCATTCCTGCTGCACGAGTCGCAATACAAACAATGGAAGTCGGTGATTTCACATCTACTGTGGCCTGTTTCATGCGACTGTCATGGGCTGCAGCCGCAGGACGGCTCGACCTCGTTGGGAGTAGCCAACCAATTAAAGAAAGTAATTCTCTGTTTCCTGCTGGAATTCGAAACAGACTCAGCAGTTCAGGAAGCAATTGCAGCTCTGGAAGTGAAGGGGACCCAGTGGCCTTGCACGCAGGCATCTGTGTACGACAACAGTCCGTGTCCACCAAAGACTCCCTGATTGCCGGAGAGGCTTTGTCTCTACTTGTCACCTGCCTGCAGCTTCGGAGCCAACAGCTGGCCTCTTTCTACAACTTGCCCTGTGTTGCCGATTTTATCATTGATATTCTGCTTGGATCACCAAGTGCTGAGATTCGCCGTGTTGCCTGCGATCAGCTGTATACTCTGAGTCAGACAGATACTTCAGCCCACCCAGATGTGCAGAAGCCAAACCAGTTTCTGCTGGGTGTGATTCTCACTGCTCAGCTGCCTCTCTGGTCCCCAACCAGTATCATGCGAGGAGTCAATCAGAGACTGTTATCCCAGTGCATGGAGTATTTTGATCTGAGGTGCCAATTATTAGATGATCTGACAACTTCAGAAATGGAGCAGTTAAGAATCAGCCCAGCTACCATGCTTGAAGATGAGATTACCTGGCTGGAAAACTTTGAACCCAATCGCACAGCTGAGTGTGAGACCAGTGAAGCAGACAACATCTTATTGGCAGGACACTTACGGCTCATCAAGACCCTTCTTTCACTCTGTGGGGCAGAAAAGGAAATGCTCGGTTCATCACTCATTAAACCATTGTTAGATGACTTCCTTTTCCGAGCTTCTAGAATTATTTTAAATAGTCATTCTCCAGCTGGCAGTGCCGCCATCAGTCAACAGGACTTTCATCCAAAGTGTAGTACAGTGAATAGCCGATTGGCAGCCTACGAAGTCCTTGTCATGCTGGCTGATAGCTCACCTTCAAATCTTCAAATTATTACAAAAGAACTACTTTCTATGCATCATCAACCTGATCCTGCTCTTACTAAGGAGTTTGATTACCTTCCCCCTGTGGATAGCAGGTCCAGCTCAGGGTTTGTGGGGCTGAGGAATGGTGGTGCTACGTGTTACATGAATGCCGTCTTCCAGCAGCTGTATATGCAACCTGGTCTCCCAGAGTCATTACTTTCAGTGGATGATGACACGGACAACCCAGATGATAGTGTATTCTACCAAGTGCAGTCTCTCTTTGGGCATTTGATGGAAAGCAAACTGCAGTACTATGTACCTGAGAACTTTTGGAAGATTTTCAAGATGTGGAACAAAGAACTTTATGTGAGAGAACAGCAGGATGCATATGAATTCTTCACCAGTCTCATCGATCAGATGGATGAGTATCTCAAGAAAATGGGGAGAGACCAAATCTTTAAGAATACCTTTCAGGGCATCTATTCTGATCAGAAAATCTGTAAAGACTGTCCTCACAGATACGAGCGTGAGGAAACTTTCATGGCTCTCAATCTAGGAGTTACTTCCTGTCAGAGTTTGGAAATTTCTTTGGACCAGTTTGTTAGAGGAGAAGTTCTCGAGGGAAGTAATGCATATTACTGCGAAAAGTGTAAAGAAAAGAGAACAACAGTGAAAAGGACCTGTATTAAATCGTTACCTAGTGTCTTGGTCATTCATCTGATGAGATTTGGATTTGACTGGGAGAGTGGACGCTCCATTAAATACGATGAACAGATAAGGTTTCCCTGGATGCTAAACATGGAGCCTTACACAGTTTCAGGAATGGCTCGCCAAGATTCATCTTCCGAAGTTGGTGAAAACGGGCGAAGTACAGATCAAGGAGGTGGAGGATCTCCACGAAAAAAAGTTGCCCTCACAGAAAACTATGAACTTGTGGGTGTCATTGTACATAGTGGGCAGGCGCATGCGGGCCACTACTATTCCTTCATCAAGGATAGGCGGGGATGTGGAAAAGGAAAGTGGTATAAATTTAATGACACAGTTATAGAAGAATTTGACCTTAATGATGAGACCCTGGAGTATGAATGCTTTGGAGGAGAATATAGACCAAAAGTTTATGATCAAACGAACCCCTATACTGATGTACGCCGAAGATACTGGAACGCATACATGCTCTTTTACCAAAGGGTGTCTGATCAGAACTCCCCTGTGTTACCAAAGAAAAGTCGAGTCAGCGTTGTACGTCAGGAAGCCGAGGACCTCTCTCTGTCAGCACCATCTTCACCAGAAATTTCACCTCAGTCGTCTCCTCGGCCCCATAGGCCTAACAATGACCGACTGTCTATTCTAACCAAGCTGGTGAAAAAAGGTGAGAAGAAAGGACTATTTGTGGAGAAAATGCCTGTTCGAATATACCAGATGGTGAGAGATGAAAACCTCAAGTTTATGAAGAATAGAGATGTGTACAGCAGTGATTATTTCAGTTTTGTTTTGTCTTTAGCATCATTGAATGCCGGTTGACACTGAAGAGTGGATTGCCACTATTGAAGCATTACTTTCAAAAAGTTTTGATGCTTGTCAGTGGCTAGTTGAATACTTTATTAGTTCTGAAGGACGAGAATTGATAAAGATTTTCTTGTTGGAGTGCAATGTGAGAGAAGTACGCGTTGCTGTGGCCACAATCCTGGAGAAGACCCTAGACAGTGCCTTGTTTTATCAGGATAAGTTAAAGAGCCTTCATCAGTTACTGGAGGTACTACTTGCTCTGTTGGATAAAGATGTCCCCGAAAATTGTAAAAACTGTGCTCAGTACTTTTTCCTGTTCAACACTTTTGTGCAAAAGCAGGGGATTAAGGCTGGGGATCTCCTTCTGAAGCATTCTGCTCTGCGACACATGATCAGCTTCCTCCTCGGGGCCAGCCGGCAGAGCACCCAGATACGTCGGTGGAGTTCTGCACAAGCTCGAGAATTTGGGAACCTCCACAACACGGTGGCGTTGCTCGTCTTGCATTCAGATGTCTCTTCCCAGAGGAATGTTGCTCCGGGTGTGTTTAAACAACGGCCGCCTATTAGCATTGCCCCCTCGAGCCCCCTGCTGCCCCTCCACGAGGAAGTCGAAGCCCTGTTGTTCCTGTCTGAAGGGAAACCTTACCTGTTAGAGGTAATGTTTGCTCTGCGAGAGCTGACGGGCTCACTGCTGGCGCTCATCGAGATGGTGGTGTACTGCTGTTTCTGTAACGAGCATTTCTCCTTCACCATGCTGCATTTCATTAAGAACCAACTAGAAACAGCTCCACCCCATGAGTTAAAGAATACATTCCAACTACTTCATGAGATACTGGTCATCGAGGATCCCATACAAGTGGAGCGAGTCAAGTTTGTGTTTGAGACAGAAAACGGATTACTAGCTCTGATGCACCACAGTAATCATGTGGACAGCAGTCGCTGCTACCAGTGTGTCAAATTCCTTGTAACTCTTGCTCAAAAGTGTCCTGCTGCTAAAGAATACTTCAAGGAGAATTCCCACCACTGGAGTTGGGCTGTGCAGTGGCTGCAGAAGAAGATGTCAGAACATTATTGGACACCACAGAGTAACGTCTCTAATGAAACATCAACTGGAAAAACCTTTCAGCGAACAATTTCAGCTCAGGACACGTTAGCATATGCCACAGCACTGCTGAATGAGAAGGAGCAGTCAGGAAGCAGTAACGGGTCGGAGAGCAGTCCTGCGAACGAGAATGGAGAGAGACACTTACAGCAGGGTTCTGAATCACCCATGATGATCGGTGAGTTAAGAAGTGACCTGGATGATGTGGATCCCTAGGGGCCGTGCCCAGCACGTGACGAGCAGTCCTGTCATGGTTACTGGATGCTCAGCACCTTTTTGAAATCAGAATCTCATTCTTGAACCCTTTAGCAGAGCCCGGAGGCTGGACTGGGAGAACCTACCATGAGGGGAGGAGCCCGTGTTTTTAAGGAACGCACTCTCAGCCCCCGGGGAAGGCCTGGGAGCTGTTTGGCAGTGGGAATGCTCCAGCTTATGGAGTTCAGCTTACCTGGGGCATGGTCCACGTGTGGACTGACACTTCTGTACAGATTTTAGGAAGTAAAACTGGTGGCAGACTGTTTTGTTACACACACATACAGGAGTGAGTGAAGATAAAGCTGTTGCTTTCTCTATGATGCTACAAAAGAAATTCCTTTGGTTTTTATATTGAAAAAAAAAAGCAAGCTGCCTTTAGATATATGGGGGCAAATTTTTAATCTTGCAGTAACATTGAATAGAAATATCAAGTTTAAAATGATGTAAAAATATGTGACAAAAATTCCTTTTCACTGTAAAATAGTAGTTAAAGAATTCAGTTTACACAGACCTTTGTATTTAATATGTCTCCCTATTTGTATAGAATTTCAGGTGGGTCTGGATGAGAGCCCTGGGCATAAACTTGGATCTTAATGAAATGTTACCAGGATCAAAAATTGGGAAATTAAGCTCTTTAAGGTATTTTTCTGATAAAATTGAGATTGAAAGAGCAATTAAAAAAATGCTGTGTTCTCTAGAAGTATAGAGTGCATTCTTTGACATCAATCACTAATTGTTCCCAAAACAAATTTTACAAAGAGCAAAATAAAAAGCACTTTAAGATATGATTTTATTTAGTTTGACTTCATAAAATCTTTTTAATGCTTGGAGACATATTGAATAAACTGTAGTCTTAAATCATGTGACCTGCAATCATTTGCTTTTGCTGGAAATTTAATTACTAAAACCCTTGGTACTGGTTGTATATGAAGTTAAATATTTGAGTTGAGAGACACTGCTTTGTGAGTTTCTGGACGTTTTACCGCAGAGAAGGAATAGGAGACTTGATTTCTCCTCATCATGATTGACTGACACTGAAAAGATATGGATAAGAAAGAACTCACAAGCCACTGAACAACCACCCATTTAGCTGTGTTTCCCAGGTCTTGGCGCCATTCACTCGTTTCAGGTTCGCTGCCAGCCCACTCCTTTTTCTGGAGTGGAGAAGGGATGCCGACATGGTTCATATATTGTGTACCTTTGGGGTTTTGAGTCACTGCACACATTTTCAATCCTGTTTCTCTTTAGTTGCGTGCTCTGCCTTGTTCTGTGCTCCCACGCACAGGACTAGGGGAGCCTCTGGAAGCACTGAGCGGCCCCAGTCAAGGGTCTGCAGAGTCAGAGAGGCGCAGAGGACGCATGCCAGGGCTGACAGCTGCTCCTGCCGCGCACTGCAGACTCTGTGGCCTCACCGCCGAAGGTGCAGTTACATTGCGGCCAGGCTGCAGTCTGTAATTGCAGGACTGGCCAGTGGTGATGTCTGTCAAAGACACCAGCTGGGTGGAGGGCCAACACCTCAGAGCAGAGCTGCGCCCCAGAGAAAGGGCCGGAGGTCCTTGGCAGATTTTATGTGGTTCTGATGTTCTTGCAAATTTAAATGTGATGTTTTAAAGTGGATTTTTGAGTCCGTGAATACCCACACCCTGCTGCCCCCCCACCCTCTCTCTGCCCTCCTCCTCACAAAGCGACCCCGCGGGATGTGACCTTGAAATGCCAGCCACGAGGATATGGCGCTGGCAGCTGCACTCAGGAGCCCAGATTCAGGAGTGAAATTGCCACTTCTGTCCCTTATTTCCTATGGAAACAATGCCTTCCACAGCCCCCAGCACCTGCTATCCTCACAGTAGCGTTCATCGGGACCAGGACTACCCGTCGCTGACACGAGGCTCCTGGTTGGTTTTGCTCGCGTTGTTGCTGCAGTGAACATCACTTGCCCTTTGCCAGTAACCTTGATTTCCCCATGGCTGCAGTCTGCCAACCTGCTGATGACTTTTTTTTTAATGTCATACAACAAAGTGACAGTTACGACAGGCTTACCTTGGAAGAGGTTCATTTTTACTGCCAATCTTTTTGGATGAAGATGTTTTTATAAATCTTTCAAAATGGTCTGCAAGTCGAATAGGAATTGCACAACTAAACCCAATGCTGTGTGTCCTTAAGAAGCTCCCTTCATGAGATCCTTCTTAGGATGGCCAAGTCAGTCCCTTAGAGACGTCCTGGGAAAGAAAGCAAAGGAGCCTTCGGACAGGCATCCCAGCCTGTGACTTCCCTGGAGCCCACACGTGGGCCCAGAGCACATTGTCACCAGACTCACCCTCTCTTGCTCCACCCTCCCTGCAAACATCAAGGTGTGTGCAGTTACCTTTTGAGCTTGGAACAGGCAGACTGGAATTTTCCTCTGCTACCTCTTGTGTACAAAATCTTGTTTATACAATTTCAAAAAGAAGTAGATAAACTAAGGAAGAAACTTCATTCTAAATTTGGTTCACTGAGTGGCAGAGTTCTTAGCTTCTAAAGGTATAAAATAAATTTTTCAAAAACAGAGTTGGAGGCTCACTGACATTTTTCTGTGTATACCAGAAAATGGCTGTGGTTGGGGGAGGGGTGCCAGGGGCCGGTGACCTGGAAGGAAATAGTGCCGATTCCTTTTCCTACTTTGTACCAATGATGTGAATAGGGTCCATTCTTTAATGATAAAGGGCAGTGGGTCTTTTTCTAAGCTTTAGTCCCTCTGGATATCTTGACCATTTCAGGATTCACTTGCAAAGCTGGATAAGGATGTGCAGAGCTCAGACCAGTGGCCTGCAGCTGTCTTCCCCTTAGCTTTCAGGCATCCCTGCGGTCCCCAGCATAAATCACATCCCTGATCAAGCTGGATTTCTTGTTGGACCCCACGGGTCTCAGCCTTACTCCTGATGCCCTGCCTCTGCCCACATGGTTCCCCTCTCCTGGGCTCTTTGCTGATCCATCTACTCTGCAGTCCACACCCATTCCTCCCCGGCTCCCAGTGACCAGCTATCATCGTCTGCAAAAACCAGGTGTTCCCTTTTCTCAAATCTTAGAGCCTTCTGGGTATGAACAGCTAAGGAGCTAAACTCTGGCTCTTGGGTGATGGGGAGAGGGGTCTCTGGCATGTACCACAGATAGGGTGCCACTGGGCCCACTTACACAGATATCCTCTGGCAGTCGGGTCCTTAGCAGCTGGCAGGTTTTAAACACTTTCCATGACACTAAGTTGTCCAAGTTTGAGAGGACTTCTGCCTTTGCAGGTCCATTCCCTGATCACTTATAATATGAGCTGTTTCGAGCTAGGCCTTGCTCAAGGCAGCAACACTCGCCAGCCTCAAAGTGGGGCTGGGGGTGGGGGGCCACATTGCATGGGGTGATTATTATTTTTGCAAAGTGGAAAGTTCTGAGACTGTTCTTAATTTCAAATCATGAAAAATGACCCTGGAC EMBV3_13714 CATGCTTGGTGTGGAGGCAACTTCCTGGAGTTATCTGTTTCATTACATCTGCCAAGACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17852 ATGCATGGACTGGGGGGAACGTCTCATAGAAACCCCCAGGGAAACCACCCAAGCTTGTTT Gene GeneID:281662|CAPN2:NM_001103086:2_cdna UTR3_Alt 2 NULL GeneID:281662 16 GENE CAPN2 MGC138930 calpain 2, (m/II) large subunit EMBV3_32389 CATCTCCTCCAAAAAGAACATGAGGAGGAAGTGAGGAGCCTACGCGCTCATCTGGGCAAT Gene GeneID:505214|KRT20:NM_001101851:73_cdna Constitutive 0 NULL GeneID:505214 19 GENE KRT20 MGC152269 keratin 20 EMBV3_41984 CTCAGCTTCCTCATTTGTATGATAAGGTGGAGACGCGGTGGGTTAGCAGCTCTGCAGGTG Gene BVT0102_178059 + 0 NULL GK000005.2:47737228-47796249 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194896 1 XLOC_117868 Coding TCONS_00194896 XLOC_117868 NonCoding Coding - 5:47751830-47776517 - TSS145331 1247 1 TCONS_00194896_5 95 0.0561347233360064 2 0.94956655594264 0.00503525613050088 0.00244818074869115 0.00212089364271816 0.00608026963941651 0.00738152407562108 0.00151821938444183 0.00177424511852471 0.00295821446522321 0.00397904444483122 0.00197546194408973 3.86324784070026e-26 3.44090285159175e-05 0.000355663978966106 0.00159500916246357 0.000372174806918651 0.000593622918323786 0 0.00148988492905826 0.000539152627295399 0.00216014704881048 0.000363537582493279 0.000439628807545104 0 9.66828356520733e-11 0.00437346371699955 0.00183410528975126 0.0033638664439873 0.000138646828699153 0.000486602337373294 3.59053648832725e-06 0 noncoding 0 0 0 0 0.00717315385078521 0.947827688122984 0.0369829108443026 0.635373655341221 CGCTGCCCAGCTCCTCAGCAGTTCCCTGTGATGGGCTTTCTCCGCACCTGTACCCAGGTGAGCAGGGGAAGGTCCAGGGCAGCACCGCGCAGGCGTGGGCTTGCGCGCACGCCGCCTCCGCTCCCCGCTCCTTGCTGTACCTCCGCCCGGTTTCGGAGTCTCAGGTCGGCCTAACAGCACTTGTTAGAAGGCTTTTCTCCAAGCTCCCTTTCCTTTCTATCCTCTGACTCCGAGCTACTGTCCTCAGTTCCTGCTTCAGAAGGAAAAAGCCGACAGTGGGCTACCTCGGCCTCCGTCTGACGGACAGCCCGCGTACCCTCTGCTCTTCATGGATCTTCTTGGCCTTTTCTTTGTGTGCCCTAGACCTCCTGTCTCTCCTGCATTTGGTCAGCTAGTCTTCGGACTTTACCATGAGGCTCTTATTTCCCATGTCTGCTTCTCCTCAACATAGAAACATGATTATGTAGATTTCCCCCTTGTTTAGGAGGGAAACCCCTTCTTTATCATGTCTTATCTAACTTCCTACTTTTCTCAGCCAGGCTCTTTAATAAAGCAGATAGCACTGGCTCACTCCCTTCCTTTACTTCCTGTTTGTTGCTCAGATCCTTGAAGAAAGGGTTTGCCCTCCATTCCATGAAAATTTCTCTGAGACAGTTACCTTCTAAGGGCAATCAACAGTTGGTCTTCACCACACCTCTGATTCCTCTGCAGCGTCTGACATTGCAAAATTCTACTTCCTTCTAGTAGGGCTCACTCTCTCACTCTCTCTCTGTCTCTCTCCCCTTCTCTCCTGGTTATATTTCTACCATTTTGACTCATCCCTCTCTTTCCTTTCTTCTTCTCTTTCCCCTTCCTCCCTACTTCAGAAGGAAAAATAAAAAGACACCCTCCTTTCCCTCAGGTTTCCCATTCTCTGGGCTTCCACCTCCACCCTTCTTTTCTCCTGTCACAGCCTCCCTTGATGAATTCACTTGCTCTCCTGGCTGTAACCACTCTCCATTTTCTAATGAGCCCACAGTGCCAGGCTCCAGGCCCACTGCACCGAAGTAGCACAGCAAATTCAACATTGATCAGCCACTCCTCGGACCAGCTGAATGGACTGGGAGCAAATTGGTTAACCTCTGTAAGTCTCAGCTTCCTCATTTGTATGATAAGGTGGAGACGCGGTGGGTTAGCAGCTCTGCAGGTGCTATTTATGCCGCGGCCCAGCCAGCTAGTTTCCTCCCAGCCCCTGGAGAAGCCTGGAG TCONS_00194888 s 5' 179 TCONS_00194893 s 5' 0 EMBV3_05513 TGAAGACTTTGGAAGTGGGGCAATCTTCATGATGGGTCTGGGTTCTATGCATCTCTGGGC Gene BVV0102_209430 + 0 NULL GK000002.2:136461976-136480736 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30213 AGACCCAGATCCTGACGAGAGATGCGAAGGGCATCACCCAGGAGCAGATGAATGAGTTCA Gene GeneID:536607|ACTN2:NM_001034635:96_cdna Constitutive 0 NULL GeneID:536607 28 GENE ACTN2 MGC128123 actinin, alpha 2 EMBV3_22253 TCCTTTTGGAATTACAAGCCTGGAGTTTGAGGTGACTGTGCACTGGCCGTCGCTGCACGT Gene GeneID:508503|ELF3:NM_001098909:51_cdna Constitutive 0 NULL GeneID:508503 16 GENE ELF3 MGC139318 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) EMBV3_15436 ACTTAGAGGAAGCCAGAACCAAGGCTACACTGCTCATCCAACTCCCTCTCCACTGGTACT Gene GeneID:618186|DERPC:NM_001114969:450_cdna Constitutive 0 NULL GeneID:618186 18 GENE DERPC CHTF8 CTF8 MGC155310 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) EMBV3_03551 TTTGTTCCCGGGGACTGCCGGTTGGTGGAGCCCCATGTCATCGTACACTGTGCAGCAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30124 GCAGACTTTGTCAACCTGTCAACTAATCTGAGTCTTCGGTCATCTGTCAGTGAAGGAATT Variant GeneID:512213|COG2:NM_001076839:17_cdna 370^435 1 EMBV3_19160 GeneID:512213 28 GENE COG2 MGC139920 component of oligomeric golgi complex 2 EMBV3_17191 GTTAAACAAACAGGGTGACAAACAGACAGCCCCGTCGTGCTCCTTTCTCAGTCCTATACC Gene BVV0102_220602 + 0 NULL GK000008.2:95412476-95550068 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43042 CATGTCTTCGCAAAGAACCTGGTGGCATTTGTGTCTCAAGAAGCTGGGAACAGAGCTGTT Gene GeneID:510741|PSMG3:NM_001046059:134_cdna Constitutive 0 NULL GeneID:510741 25 GENE PSMG3 MGC137700 proteasome (prosome, macropain) assembly chaperone 3 EMBV3_26489 TGAAGGATGTTTGTGTTGTAGCTAACTGTTCAAGTCTGGTGCTGACTGCTATTCTTAGCC Gene BVT0102_132462 + 0 NULL GK000013.2:36333081-36372383 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045082 TCONS_00045083 TCONS_00045081 TCONS_00045089 TCONS_00045085 TCONS_00045079 TCONS_00045088 TCONS_00045086 TCONS_00045078 TCONS_00045087 TCONS_00045080 TCONS_00045084 1 XLOC_026344 Coding TCONS_00045089 XLOC_026344 Coding Coding WAC 13:36369978-36448920 = TSS32982 5031 1 TCONS_00045089_5 643 14 0.936446206660671 0.0480849970720829 0.0518174958604268 0.0379140932953289 0.0335840324606285 0.0422537473965906 0.0182079187692448 0.0239465031388203 0.0311567096308155 0.0479555216165406 0.0176184208036392 0.00733054407825074 0.00629852740745488 0.0111817969111009 0.0408122829533933 0.0251665913059682 0.0137182910974366 0.00356467563782098 3.5830201387594e-06 0.0313520132215306 0.0446483960258445 0.0213691375376994 0.00737922690897541 0.00565189156842866 0.00715900993233278 0.0611047723449442 0.0625793654781516 0.0366707175480074 0.00393817162497552 0.00282456719015151 0.00733846073108818 XM_002692128.3 WAC PREDICTED: Bos taurus WW domain containing adaptor with coiled-coil (WAC), mRNA. 0.0 9048 99.94 0.999204929437488 NM_016628.4 WAC Homo sapiens WW domain containing adaptor with coiled-coil (WAC), 0.0 5380 94.73 0.681773007354403 TCONS_00045089_5 sp|Q924H7|WAC_MOUSE WAC_MOUSE WW domain-containing adapter protein with coiled-coil; 0.0 1181 94.58 0.973561430793157 1 noncoding 0 0 0 0 0.0121804930387402 0.925640435187016 0.00148695946105307 0.973972676523146 ATGGTAATGTATGCGAGGAAACAGCAGAGGCTCAGTGATGGCTGTCACGACCGGCGGGGGGAACGCGCAGCCTTACCAGGCACTTAAGTATTCATCGAAGAGTCACCCCAGTAGTGGTGATCACAGACATGAAAAAATGCGAGACGCCGCAGATCCTTCACCACCAAACAAAATGTTGCGGAGATCTGATAGTCCTGAAAACAAATACAGTGACAGCACAGGTCACAGTAAGGCCAAAAATGTGCATATTCACAGAGTTAGAGAGAGGGATGGTGGGACCAGTTACTCTCCCCAAGAAAATTCACACAACCACAGTGCTCTTCATAGTTCAAATTCACATTCTTCTAATCCAAGCAATAATCCAAGCAAAACTTCAGATGCACCTTATGATTCTGCAGATGACTGGTCTGAGCATATTAGCTCTTCTGGGAAAAAATACTACTATAATTGTCGAACAGAAGTTTCACAATGGGAAAAACCAAAAGAGTGGCTTGAAAGAGAACAGAGACAAAAAGAAGCAAACAAGATGGCAGTTAATAGCTTCCCAAAAGATAGAGATTACAGAAGAGAGGTGATGCAAGCAACAGCCACTAGTGGGTTTGCCAGTGGAATGGAAGACAAGCATTCCAGTGATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCTCAGACAAGCAGACACAATGACAGAGACTACAGACTGCCAAGAGCAGAGACTCACAGTAGTTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACTGCTACCCCAAGCACTGTTCCTTCTAGTCCATTTACGCTACAGTCTGATCACCAGCCAAAGAAATCATTTGATGCTAATGGAGCATCTACTTTATCAAAACTGCCTACACCCACATCTTCTGTCCCTGCTCAGAGAACAGAAAGAAAAGAATCTACATCAGGAGACAAGGCTGTATCACACTCTTGCACAACTCCTTCCACATCTTCAGCCTCTGGACTGAACCCCACGTCTGCACCTCCAGCATCCGCTTCAGCAATTCCTGTCTCTCCTGTTCCACAGTCACCAATACCTCCATTACTTCAGGACCCAAATCTGCTTAGACAGTTGCTTCCTGCTTTGCAAGCCACGCTGCAACTTAATAATTCTAATGTGGACATATCCAAAATAAATGAAGTTCTTACAGCAGCTGTGACACAAGCCTCATTGCAGTCTATAATTCACAAATTTCTTACTGCTGGACCATCTGCTTTCAACATAACTTCTCTGATTTCTCAAGCTGCTCAGCTCTCCACACAAGCCCAACCATCCAATCAGTCTCCAATGTCTTTAACGTCTGACGCATCATCCCCACGATCGTATGTGTCTCCAAGGATAAGCACACCCCAGACAAACACAGTCCCCATCAAACCTTTGATCAGTACTCCTCCTGTTTCATCACAGCCAAAGGTTAGTACTCCAGTAGTTAAGCAAGGACCAGTTTCACAGTCGGCCACACAGCAGCCTGTAACTGCTGACAAGCAGCAAGGTCATGAACCTGTCTCTCCTCGAAGTCTTCAGCGCTCAAACAGCCAGAGAAGTCCGTCACCTGGTCCAAATCACACGTCTAGTAGTAACGCATCAAATACAGCAGTTGTACCACAGAACTCCTCTGCCCGACCTCCGTGTTCACTAACACCGACGCTCGCAGCACACTTCAATGAAAATCTCATCAAGCACGTTCAAGGATGGCCTGCAGATCATGCGGAGAAGCAGGCATCAAGATTGCGAGAAGAAGCCCATAACATGGGAAGCGTTCATATGTCAGAAATTTGTACTGAATTAAAAAATTTAAGATCTTTAGTCCGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAAAGGATACTATTTTTGAGACAACAAATTAAGGAACTCGAAAAGCTAAAAAATCAGAATTCCTTCATGGTGTGAAGATGTGAATAATTGCACATGGTGTTGAGAACAGGAACTGTAAATCTGTTGCCCAGTCTTAACATTTTTGAGCTGCATTTAAGTAGACTTTGGACCGTTAAGCTGGGCAAAGGAAATGACAAGGGGTCGGGGTCTGTGAGATTCACTTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGTAGATTTCTTGTAGATGTATTCTTCACGTTGTAAATATGTTTTGTAGAGTGAAGCCATGGGAAGCCATGTGTAACAGAGCTTAGACATCCAAAACTAATCAATGCTGAGGTGGCTAAATACCTAGCCTTTTACATGTAAACCTGTCTGCAAAATTAGCTTTTTTAAAGAAAAATTTGGGGGGTTAATTTATCATTCAGAAATCTTGCATTTTCAAAAATTCAGTGCAAGCGCCAGGCGATCTGTGTCTAAGGATGCGATTTTGAACCATATGGGCAGTGTACAAAATATCATGAAACAACTGTTTCCACACTTGCACCTGATCAAGAGCAGTGCTTCTCCATTTGTTTTGCAGAGAAATGTTTTTCATTTCCCGTGTGTTCCATTTCCCTCTGAAATCCTTGATCTGATTTTATCCATTTTTTAAGGCTCCTCTTTTTCTCCTTTCTTAAGGCACTGTTGCTATGGCACTTTTCTATAACCTTTTCATTCCTGTGTACAGTAGCTTAAAATTGCAGTGATTGAGCATAACCCACTTGTTTGTATAAATTATTGAAATCCATTTGCACCCTGTAAGAATGGACTTAAAAGTACTGCTGGGCATGTGTGCTGAAAGTACATTGATTGCTCAAATATGAGGAAATGGCCCAATGAACATGGTTGTGGGAGGGAAGAGGAAACAAAGCTAGTCAGATGTGAATTGTATCTGTTGTAATAAACATGTTAAAAGAAACAAAAATTGTTATTTTTCTTTACCTTCAGTCAATGCATATTAGAATTTGAACTACCTGGGGATTCTTTATCAAAACTATTCTTGTTGAACATTTATACTTCATTGAAATAATTCCTTAAGGGAGGTTTTGTTTAAAGCATATTAACAGGAAAATGTGTATAAGACTATTTAATGAAATAAGAAATTCAACAAGAACAATTAAGTCACTTCCCAAGTGGTTGTCATTTGTTAAAACCCTGGTTTACCTGTCTTGCTATTATGACATTTCATTTTGAAGGATGTTTGTGTTGTAGCTAACTGTTCAAGTCTGGTGCTGACTGCTGTTCTTAGCCATCACAAAACGCTAAATTTGTGTAATTGGAGCTTCCTGCTGTTACCTGGAGACAGTGGGAAAGCTCAGCTTTGTATATTGTTTCCTAAAGTATATTAAAATAAAAAAAGAAACTATTGCTACTATAAAATTACCTTGGCTTTTTTTTTTCTTTGCTAAAATATTGGTCACGTGGCCTTAGCATGACACTGCCAGTATTAAATCAGATCACAAGGGTTTCTTTATGCAGAAAAATCTCCTAGTTCAAAATCTTATCCAATTTAGAGACTTTTTTTCCTGTTGAGGCAGATGCATTCATGTGCTTTCAGAACTGCCAGCACCAAGGGCTTATTTTGTGATGTTAGACATTGTTGCTACATTCTGGGATGCAAAAATTCAAAATGCTCTTGTGCTTTAAGCATATTTAAAGTATAGAAGATAATGCTCAGACTTCTTAATACATTTAAAAAGGTAAAATGTGATATTTTCTAAATACAAAAATATTCCAGTGTAATTAAGATCATACTGGAAACTGACTTTTTTTTTTATTGTAACTTGAGGATAAAATGTAAGAAAAGACAAATGTCATAAATTATATCATCATGAAATGTTAATATCTGTGAGATTGTTAATATTTGCTGGGCTTGATTAGTGCATGTACATGAAATTCGTAAGAGCTTTGTTAAGTTAGAACCCTTACTGATGTAGTCCTGTGTCTTTTCTGGAAAGATGATGGGGTAGGCAGATATTTCCCCATCAGATGGCAGCTTGGCTTGTGGTTTAAAGTAACTTTGAATTTAATTTTCTAATTGTTTATTGATCTGTATCACCTTATTCTTTGGACTTTTAAAAAGTGTTTTTATCCCTAAATTAGGAATTGCTCATATATATATATATACACACATATATGTGTGTATATATATATATATATGAGAAGATGCCTAATTTGAAATTTCCCAGTGAATTTTTAAACAATTAAAAATTTTGTGGAAATATTTTTACACTATTTGATTCACTTATTCTGTAGTGAATTATTTTAAATACTGCACTTTAATACTAATACAGACTTGGTGTCCAGCTACTAACCTTCTTGAGGTAACCAGGGGATATTTATTAAAATAGATACTATACCCCAACAATATCCTTTAGTTGTCCTGTTGCCATGGCTTTGAGCATGTATCTCATTTTGTGGACACCGTGGTTCAGAGAATTTGAGAACAGAGATACAAATTGCCCCTAGGAAACCTCAGGATTTTATTTTAAAAGGGACATTAGTAGTGTTGCATTCAAATCTTAAAAAGTGATGTAATAAAATATTCTGTGAAGGTGGGTCTGTTAGAAAGTCTTAGCCTTGAAGAGCCAGCCTCCTATTTTTCCCTTTGTCTTCTGCTTAACTAATTTGACTAACCTTTAATTTGATAACAGGCTGTACCGCCAGACTTCAAGCACACTGAAAACTCTGTGTCAGCCTTTTCTTAAAGACATTATGCTGCTTTTAATAGCCCAAATGAGTGATTTTTATCTTCCAGATTTTATATATCTGCTTCATAATTGTAAAATCTTGGAAAGGAGGTGCTTAACACTTTGCAAAGAATTAATTGTTAACCCATATCAGAAACAATCTGTTCTCTTTAAACACAACCTTTAAGGGATTATTTCAAAGGGGAGGGGGCAGGGGGCGAAGTCATTCACTGCAAACCAGAACTATTGTAGTTCAGGACTTAAAGCTACTGTATTTAGATGTGGGGTTTGAATATACGGATTTCTTTTCAATAACTGTAAATATGGCTATATTCTTGTATTTGTACTGGAGTGTACAAAATGACACTGAAAAGTAATAAATATGTTTTGACTATAT EMBV3_38196 AAAACTAAAATATCCCTTGAACCAGAACAGGTCATGCCTCAGCTGCTCAACTACCTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43348 AGACTACTGACATTAATACTCTCCGTACTGACTGTAGGCTTAGGCCTTGCAAGTGCAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02939 AGATCTGCAAGTACCTGTTCCATGTGCTGGCGCATATCTACTCGGCGCACTTCAAGGAGA Gene GeneID:789811|HCCA2:NM_001099732:40_cdna Constitutive 0 NULL GeneID:789811 29 GENE HCCA2 HCCA2 HCCA2 protein EMBV3_34795 CTTGTTGAGGGATTTTCTCTGCCACTCGGGGGCTTGGGGGGATCTCCTGAGGCTGGGGTT Gene GeneID:100140713|REXO4:XM_002691623:294_cdna Constitutive 0 NULL GeneID:100140713 11 GENE REXO4 NULL REX4, RNA exonuclease 4 homolog (S. cerevisiae) EMBV3_23040 TCTTCGACATCATCGGCCACAGCCACCAGCTCTTCCACATTTTCACCTTCCTCAGCATCT Gene GeneID:522374|PAQR9:NM_001077951:39_cdna Constitutive 0 NULL GeneID:522374 1 GENE PAQR9 NULL progestin and adipoQ receptor family member IX EMBV3_30741 CAGCCAAGTGAGAGTTGATCTTCAGGGTGGTTTCTTGGGAGCACTACTTATTCCAGCTAC Gene BVT0102_075747 + 0 NULL GK000006.2:88030488-88049497 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203696 TCONS_00203697 TCONS_00203695 1 XLOC_124240 Coding TCONS_00203695 XLOC_124240 Coding Coding MOB1B 6:87941251-88035823 j TSS152528 6420 1 TCONS_00203695_2 174 0.0898753894080997 6 0.932177940383416 6.75076701321295e-09 1.94993676001666e-09 1.26557745328377e-08 1.54247315723731e-08 1.72438612366434e-09 3.30378085883156e-05 1.04962036953344e-08 4.67177345430878e-08 1.86103896538689e-08 3.05078733804984e-05 2.73146295411475e-05 5.51602454691942e-05 2.57531705722474e-10 5.32768633038932e-07 0.000169023258212937 1.67955155540796e-08 0.00720889344299024 0.000769523497760018 4.77423899207332e-09 3.37022294003937e-08 1.65329056124291e-10 0.000596981399928009 6.54999834533651e-09 0.000353317057035241 4.37707563708489e-09 4.12656713148075e-09 2.40578047446787e-06 0.000107751728740881 6.15489233530044e-05 2.52018711205563e-09 XM_005208090.1 MOB1B PREDICTED: Bos taurus MOB kinase activator 1B (MOB1B), transcript 0.0 1.158e+04 100.00 0.999844236760125 NM_001244766.1 MOB1B Homo sapiens MOB kinase activator 1B (MOB1B), transcript variant 1, 0.0 3748 80.87 0.62803738317757 TCONS_00203695_2 sp|Q7L9L4|MOB1B_HUMAN MOB1B_HUMAN MOB kinase activator 1B; 3e-130 369 100.00 0.994252873563218 1 coding 0 0 0 0 0.0678616562615174 0.625483901212585 -0.0383728265805199 0.500712368875663 TGTGGAAACTGAGGCGAGAAGAGGACTTCCGGTTCTGAGAGGATTGCCCGCTGGAGACGTCCGACGCCGGGCGGTTTCTCCCGCCTTGTGAGTGGGAGTCGCTCATCTAAAACGTTTAAACCAAAGAAGAACATTCCAGAGGGTTCTCACCAGTATGAGCTCTTAAAGCATGCAGAGGCCACTCTTGGCAGTGGCAACCTCCGGATGGCTGTCATGCTTCCTGAGGGCGAAGATCTAAATGAGTGGGTTGCAGTGAACACTGTAGATTTCTTCAATCAGATCAACATGCTTTATGGAACAATCACAGATTTTTGTACAGAAGAAAGTTGTCCGGTGATGTCAGCTGGCCCAAAATATGAATATCATTGGGCAGATGGAACAAACATAAAGAAGCCTATTAAGTGCTCTGCACCAAAGTATATTGATTACCTGATGACTTGGGTTCAGGACCAGTTGGATGATGAGACATTATTTCCATCAAAAATTGGTGTCCCATTTCCGAAGAATTTCATGTCTGTGGCAAAAACTATACTCAAACGCCTCTTTAGGGTTTATGCTCACATTTATCATCAGCATTTCGACCCTGTGATCCAGCTTCAAGAGGAAGCACATCTCAATACATCTTTCAAGCACTTTATTTTTTTTGTCCAGGAATTCAACCTTATTGATAGAAGAGAACTTGCACCACTCCAGGAACTGATTGAAAAACTCACCTCGAAGGACAGATAAAAGGATGGGGACCTATGCAAATTATTCCTCAAATCAAGCTGTGTGGAGTGTATTTGAATTTTGTTGTATTTTATTTTTATCTTGGTTGTTTTTATCTACTCTTGGAGGGCTTGTTTGGGTTCCTTTTTCTTTAATCTGAATAAATGAAACCATATACTATTGCTAGAGGAAGCCAAGAACCACTGTCTATACATTTGATAGGGGTAAATTTTGTCTTAGTGGAATATAGTATTTTTTTTAACTTGGAGAATTTTTATTAATATTATATGTTGAAAGAAAATGCTTACTGATTAGACTGCTCATGGATGGCTGTTCTCCCTGTGTAAATTGTGGCTAATTTTTGAAGTCCCCAAAAGACGTTTTTAAGTGCCTTGGCAGGCTCACTTCTGAGGTGCAAAGCACAGACATAGAATTGAACAGGGCTTGAAACAATATTAGGATTTCTACCCAGGGCACTTACTGATGCATGTTTTAAAATATTGATAAAAGCCATAGTTTACCTAAATTGATGATCTCCAACTTTTACTACATTAGAGAAACACAATTTGTAAAGGTGTGCGTGTAGGGCATAAAAAATTAGTATTTCTTAATTATTTTTGATATTGATAGTAATTCTGTTCAATGGATGCTTAGAGTTCTATAAGCAAGTCTTTTCCATCTCTTGATATCTGTGATATTGAAACTTGAAGATGTTGAAATGTAATAGCTGTTACATTTTGGCTTCTTTCTACACTTTAACTGCACTGTAGATGTAAAAATTCAGGTTATATATAGGTTTGCGATCTTCAGAGGTGATGCTGAACTGTGAGGTTTCTTAGCAATTGCCAAATGAGCCATAAGTCTGCAAAATCCCCTTCTGCTTTGAAGAGGACTGGAGTGTGTGGTTGTGGGGGACGAGGGTGGGGTTAGTTTGAATGGGGCGTTATAGATGGGATTGAGTATGGGAAGTCAAGTTCAAGAAAGACCTTTCTCAGAACGCTTGACTAGAATGGCATGAAGATTTTAATCAATGTCTTGTAAACAAAGTCTTAGAGACTTCCTTTTAGGAATCAACTTCCATGTGAAGTTAAAAATAAATAACTAACTTTAGATGTAGGCATGCACATGGAATTTAAGGACTCTGTGGGAAAATTGATCACTTTACAGCATTTCCATTCAGTGAATGGAGCTGGTGTTTTATCATTTTAAAATGATACAGTACCTTCTTTGCTTGTTGTAGGCCCAAGCGTTCTGACTTCTGATTTTTCCACTGTGAAAGGAGGTCTTTCTTTGCAGTGATATCAGATAATGAAAGTGTTAAATGAGTACTTACTAACTTTTACCTTTTTTTGCCATGACTTTCTAGTGAACTATTCCCATAAGTAAAAAATTCAGAAACTTAGTTTTTGAAGTAAATATTAACATTTTTCACTTCAGTTTTATTCTTGCAAATTATCCTCTTAGACTTTCAGTTTTAATTTTGTCAGTTCTGGTAAAACTCTTTCCTTCAGTTCGAAATATATACCTTTTCCCTTGTAGACTAGAAATCTTGCTCTGAAATTATATAGACTAAAAACACTTAATAGAAAAGAATGTAAAATGAAATCAGTTTGGTTTTGCCATTAACAAATCGAATAGTGATACAATTTAATGCCATTGCAATATGATCACTAGGAACTTTTTCTCCCATTTCATTTCTAGCAATCATTCTCCACGTACCAACATGGAATTAACAGGAGAAACTGACAGAGGCAAATACATTGGACATTCATTGGTAACACCTATTTGTAAACTGCAGTGAGAACTGCTGACGTCCTTAAAACAAATATTTTAGTATCCGAATATACAACATCAGCCACTATGGGTTGATTCAGAAGTAAAATTTGACATCCAGTGATTTGGGCCCTATCCATTTAGGAAAATGAAGCACATGATTATTCAAATTGTCTTCCATACTGCATTTGACTTCGTATCAACCTAATAATAAAGGGGTTGCGGTAGCCAGGTGTGGAGAGAAAAGTGAAACATTCATTTTTCTCATTTAAGCCTTACATAGTACTGTACAAATGTTATTATAAATTAATGTTTAGTAGCAGGACTGACTTTTCCACTCTAGGTAGATAGGAGTTTCTTGTCACTGTGCCAGAATCTCAGGTGCCTGCTTCTGAGTATTCCTTGAAAAAAAGGTATTGGGAAGTAAGGACATATGTATGTGTATATATGGTAACAAAGTAGAGACATTCTCCCAGGGAGAGGCCTGGCAGTGTACATGGTGTTAACATGGCTGCATGTAGGGAAACACCAGAGCGTGTGCGAAATAACTGATTTCTTAAAAAGTTGCTTTGATTCAGTTGGTTCCCATGAGCATTAGTAAGTTGCCCTTTATAAAATAAGGATCACATCTTGTTTTACAACAGAGTTTGCTTACAAATGTCTATTGGATTCTTTCCAAGTCTCTTAATTTACAAATAACCAGGATAATGATTCCCCCCACTCTGTCCCACCTTTTTTACAGAGATACAAAGCAGAAGTTGGTTTTCTCATATGCGGATGAAAGCATGAAATATAAAGTAATAAGTTTACATAGTGTTACTGTCGCAATGCTTTGGTTAAATGTTGATATAAAGCAAGTTTTAGGAATTCTTTTAAATGATGAAGTAATGGTGGTGGAAAGAAATTAGTAACAGAAAGAGTGAAAATCTTTTCATTAGCTGTAGGTGGTGCTACTGGCTTTTATTTGCTGGCTTGATTATTCTGTTTCCCACAAAAACCATGGCATTAGTAAAACAGTAAGTATGTGTTAGGTGGTAGAGGCTTTGGAGGTCAGTTTACCTTAAATTGAAAGATTTTAGATAGCTGTTTCTTCCTACCTTTGCTTGTTATTTGTAAATGCTAAATGGTCAGCATAAAACTAGATGGGAGAAGAAATGTTTAGAGTATAATAAATATGTCTCAGACTGAGTTACTGCCTGGCTTATCAGGAAAGAAAGCACTACAATCTCTTCAGGAATTACAGATAATGCGCATATTTATATTTTACATGTAATCACCATACTCCATTTTATGTATAGTATTTTCCTTGCTTAGGGGAAAAGAGCACAGTAACAGATTTCTTTTATACCTTTGTCTTCACCCTCTCTGAGAGAGGTTTTGATAACCACTGAAATAGTAAGATATGGGAGATATAATTGTTAGTCTGTAGGACTGCCTTTTAAAATAAATATGCCACACCTTAAACAGCCAAGTGAGAGTTGATCTTCAGGGTGGTTTCTTGGGAGCACTACTTATTCCAGCTACACTGTAGAGGTATAATCACTTTCAGAGATGCCTTGAGAGTTGTTGTGTGACTATACAAGAAAATCCATTTCATCATTTTAGTTGCACCAAAAACTTTTCTGGAAGCTTAATATGACCTATCTCATTTACCAAAATGACTCTGCTTTGGCTCTTTTCTTAGAACTAAACTATTAAGGAAGTTCAAAAGAATATGCAAAAAAAAAAAAAATATGCCATAGGATCTGAATTGCAGAAGAGAATGTTTTGAGTATTGATTTGTAACATCATTTAATAAAAAACATAATTTCTTCATGTCACTACTTTGAGGTAGGCAATAGCATTTGGATGTATACATTTTATTTTATTTTTAAAAATTTAGTTTAATTATCTTACACTTAAATATAATAACTTTAAAAAAAAAGGATCCAATATTTAAGATAGAAGTAACTTAAGAAAATAACAACCTTTACCTCTATCCTTTTTTAAAAAAAACTTACTTTCATGCAAATGAACAATTTAAATTTCAAGGCTGGAGAAATTGGAACACATTTTATATATTAATTATGCTGAATTTAAGTCTGTGTATCGTAGTAAAAAATTTCAAACTGTATAATCATTTCATGTCGTTTATAACTTTAACATTTTATTGTCTTTTTAAAAGATACAATCAAGAAGTATATTTGAAAATATCACTGCATACCAAGAGGAAAGCTTATTTTCAAACATATCAGGGACATTAAAAAATATACCAATTCCTAGAAACACTATTTTAGATCTATACTTTAAGAACCACTCCTAAAATGATTTAAATATCAGCATATTGTCGTAGTATTCAGTTTCACATAGGAATTATTGTTGTTCAGCTATCAGTGTAATGGTGTATGAGAAAACTGTTTAGAGGTAAAGTTATTTCATGATTTAATGGAAAATGATTTTATTCTATAATAACAATTCTGATTGCAGACAGTTTGAATTTTTGAGGCTCTCCTAATGGGCTAATCATAGAGAAAAAATCATTTTGAAGCTATAAAACTGTGTTTCTGTGTCTGCCATACTTAAATTTTGACAAAAGAGAAAATACAGATTAAAATACTGAATACTCTCAGTTTTGCAAGTGTGACACATTTTCTGCATATAATACTACACAATAGAAAAATTTGGATTAAATCCTCAAAGATAGTGAAAACACTGGCCTTTCCAAACTGTGTGTTTACTTGTCATCTCCTTCTCTTTGGAGGTAAATTCTTTCCTTATGGCTGTTGACTTTCCCTATCTTCTTCCCTCCCCATCTTGCAACACACACTCACATGGACAAAAAACAAAACAGATTGATTATATAGGTCCTCACTATTGGTGATTCTAAAGTGATTGCTGTCACTAGATAGGTTGTGGCTGAAGTGTTGGACAGTAAAACTTAAAGGAGCATTTTTGGTTTGTTTTGGTTGACAACTTTCTTTAAACTATGTCACTGAAACTGATATTATTAGTGATATACATTTAAAATTGTATTAATATTTAGTGTCTGTTATAAATCTTTTATGTGTGGTTGTTTCTTACAGGTTTGCACGTTTTAATTTTTGTTTACTTAATTGTGCAAGGTGTAAAATAGATTCGCACATTTTCATTTTAGGAACACTTGTCTCCCTGAATTGTTCTGCAGAGATAACTATTTTTAGGGGAAATAGTTTTTTACAGCCACTAAATTGTATTTGTTATTTTTGTACATGCATTGCTAGGGTGGTAAGAGCACTAATCTTGTAGGGAAAAACTTTTGTTTTATTTGAATGTTTCCTATACATTATTACTTACAATTACCTAGGAACAGCATCATGAAATACAATAAATATAAGAACACTTAAAGTTTTAATAAAATTATTTCTATCAAACAGGACAAAACCAGAAAAATACTACCAGAGCCATAAATGGAAGCGGTAGCATACACACTGTGCAAGTGTTGTCGAGAATGAGTAAGGCGGGAGCCCGCTCTCATGGAGATGGACAGTTTCTCTATATTAAAGGAGCTGTCTAAAACATGAAATGCAATATGGGCGCGTATTGTAAATTGTGCCAAGATTACTCAAATTGTAGTTACTGTGGATCAAACTTTAAACTGTTTCATCATTTTTGTTTTAAGAGGGGATACTGAGGGAATTCTCTGGCAGTCAAGTGGTTAAGCCTTGGCGCTTTCACTGCCTGGGCCTGGGTTCGATCCCTGGGTTGGGGGAACTAAGATCCTGCAAGCCACATGATGTGGCAAAAAAAAATAAGAGGGTACTGAATGTCAGAAAGTCTACAATATGTTTTGAGAGATGTAAATAAAGTATACAGACTTGTATGTGATGGGATTGGAACTATTTAATTTCTAGGTTTTTTTTGTTTGTTTTAAGGAAGAAAATGTTTATTTAAAAATAATAAATAGTTATGTTTGGTCATGAA EMBV3_23681 GCAGTTACAAACAGTGCTGCCATGAACTTACATGTGTTGCCTTATATTCATTTGGGAAAG Gene BVT0101_021384 + 0 NULL GK000019.2:11426516-11459956 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00416 AGAGCTGGGTTCACAGTCCTTTAAGCTACTGAAATTGTCAGGAATATCAGGGTCTAGGAC Gene BVT0102_123772 + 1 EMBV3_19500 GK000003.2:78730913-78736777 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38097 AGCTCATCTGCTATCAAAAGCAATTTCGCAGATTTCAGTGGGTCTTTTTCCTCCAAGTAC Gene BVT0102_142223 + 0 NULL GK000030.2:111112447-111157578 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247997 TCONS_00247999 TCONS_00248000 TCONS_00248001 TCONS_00247998 1 XLOC_151469 Coding TCONS_00248000 XLOC_151469 Coding Coding XK X:111154693-111203650 j TSS185561 3537 2 TCONS_00248000_2 142 0.0483460559796438 4 0.92783315630362 0.000270247645826418 1.20594673633461e-08 0.000174169272069291 3.12612328230986e-50 0.000203273910973103 4.30451005504996e-129 0.000204459333235144 5.56483658069187e-05 3.87823823979573e-25 0.000249241094591947 0.000159169643442226 7.19240637180017e-05 7.02084805352268e-11 0.0014654629315796 3.3794040532745e-05 0.000843885436219834 0.00296282645186248 0.0018717937991664 5.30968128744428e-46 0.000918922310410511 0.000149842609800066 0.000374745694120127 0.000640256222195038 0.000661105533835878 0.000179491396807802 0.000452621863779456 0.000358779189919975 0.000106134877697027 0.000173332570214247 4.89393426471871e-22 XM_588399.6 XK PREDICTED: Bos taurus X-linked Kx blood group (McLeod syndrome) (XK), mRNA. 0.0 4868 100.00 0.762793327678824 NM_021083.2 XK Homo sapiens X-linked Kx blood group (McLeod syndrome) (XK), mRNA. 0.0 957 74.61 0.41956460277071 TCONS_00248000_2 sp|P51811|XK_HUMAN XK_HUMAN Membrane transport protein XK; 8e-53 176 60.23 0.880281690140845 1 coding 0 0 0 0 -0.185021459402616 0.38714893006586 -0.00171155211461459 0.973930038901444 GAGCCCCCGGGGCAGCCGCCGCCGCCACCGCCACCGCTACCGCCACCGCCACCGCGTCCGCCGCCGGTGCGCGCCGCTGACGCGCGGAGATGAAATTCCCGGGCTCGGTGCTGGCGTCCGTGTTCCTGTTCGTGGCCGAGACGTCGGCGACAGGATCCTGTCTGCCTTTGATGATCATGACTTGCTGGTTTGTTTCCAGGTGTTTTGAAGTCTTCTGCATCTATTGTCAGTCAAACCACATTGAAGAACCTTATGTCAGCATCACCAAGAAGCGGCAGATACCAAAAAATGGCCACTCAGAGGAAATTGAGAAGGAAGTGGGCCAGGCAGAGGGCAAGCTATTCACCCACCGATCTGCATTCAGCCGGGCATCGGTGATCCAGGCTTTCCTGGGCTCAGCCCCACAGCTGACCCTGCAGCTGTACATAAGTGTCTTGCAGCAGGATGTCAGTATCGGACGATGTATGTATATTTTTTATTTCTGTTTGCATTTGGGAAGCGTGGAGAGCAAAACATAAGGTCTGTTTTGTTTCAGGTGAAATTCATTTCTATGCGCCTTCCATCCGAAGTCTGTGTTGCAGTTACTAAGCTCAAAACGTAGTCTGTTCATGGTCCTTTCCCTATTGTCCATTGTGTACGGAGCCTTGCGCTGTAACATCCTAGCCATCAAGATCAAATACGATGAATATGATGTCAAGGTGAAGCCCCTGGCCTATGTCTGTATCTTCCTCTGGAGGAGCTTTGAGATTGTCACCCGAGTCATTGTCCTGGTCCTCTTTACCTCTGTCCTGAAGGCCTGGGTGGTCATAGACATACTCATCAACTTCCTCGGCTTCCTCCGTGAGTGTTGCAGTGGCAGCCTAAAGCACCACCTTTCACAGTTGACCAGACATTACCCGCCTTGTCATTGACAAAGTACCCATGATATCTGAGTTGGCTGTTGAGAGCCATCACATAGAATGAGGACAGGGGATTTCTTATGTTCTAGTTTTCTGGACTACTGGTTTAGGTAGCCTAATGTTTTATTATCCCTGAGAAGAGTTCTCACCTAAGAGCTGTCTGATGACCAGAGATGATCACTGGGGTTTTTGCCATCAGCCACATCATTCCTGTCAGAGTTTTCAGAGAAGGCTGTTCCAGTTTGGTTTTTGAATAGGCAGATGTTCCATTTTCATCTCACTAGGGCTCTTTGTACATAACCAGTCATAGCAACCTTGGCCTCCTATTTCTCATTGACTCAAAAGTCTGGATTTGCAAAATCTATTCTTAAGAATCCATGGATGCAAAATTGAATTCTTAATTTGGTTATGGAAGTGTAGAGTTTTAGAGAAGTTGTGTTCCTTCAATATGTTGGAGAAACTCTGAATCGAGGGGGTTGTTAAAATATCAAAATGATTTTGGCTTTTATAAGCAGAATTCTTACCTTCTTGTGATGGCTGAAGATATGACTCTGCTAGAAGGTAGGCTTAACCTCTTCAAGATTCAGTCCCATCCTACAGTTTTGGAAATTTCTAGTAGAAAACTCCGTAGAAATTTCTCACCTAGCACAGGTATATAGGGCATTATAAGTTTCATTATTTGAAGGAGCAGAGTTCCCCCCTTCAGTTAGATACAGACTTTAGAAACTTAAATTTTACAAAGAGATGGTATGACCAGAAGATTTTTATCTTTAACTGAATGTACCTTGATTTGGTATGATTATGAGTTAATTTGAATAAGAACTTCAATTTTATCCTCCTACACTCTCCTATCTTCAGTATAATTTCTCCTTTAATTTGGAACCCTGTTTCTTTTGTAAAAGGATCTGTAGAATCTCCTCAGTTGTCCAGGGAAAATGCCTTGATCTAGTGCCATTATTTCTACCATAAAAACCTTGATAATGAAATACCTGGGAGCAGGTGACCTGTCACTGACAAGACTGGACATTGCAGGTCAGTCAGGGTTGACAGTCTTAGGACCCTAATGGCTGAACTTTCAGAACCATCCAGTTTCTAATAGCTAGTTTGTCGGAGAACAGGTTAAAATGGTGAGTTTAAGCAGGAGTTGTGGTCAGAATTAGACCAGCATGGAGAGACTAGTACTTCCCCAGCCTTCATTTGGAAGCCTGTCTCAAGAACCGTTACAAAATCTGGGCCTTCAAATACATTTAAAATCATTTTAATGTAGCATGTAGGTAAGCATATTGAGTGACCCCAAATCAATCTAACAGTGATGGTCTGCCACACTCCCAAAGCCCAGTTTTAAGCCACATTTATAAGGATAATTATAAGGTTTGGTAACTAAATTGGACATTTTGTCGTCTTTAACTCTTGATATGAAGATACCCCCACTTTGGGACCACAAAGTGACCATGTAGTCACTTTGGGGAAAGAAACCACTGCTTTTTTCATGGCAAAAATTTAAATCCTAGTGAACTGAGAAATTTTTTTTAATGATTTATATTATACCTCTGAAAAGGCAAAATTATGCAGAACTAGGTTGCCCTAAAGACAAACAAACCAGCAAATCTCCTATCTTGAGAGTTAAAACATCTTTTTCAGTTATAATTCCAATTTTTAAAACTCTCAGTGCTTTGTCTAATTACATGCCTTAACTTGTCATAAGAGATGCACCAACTGAATCACTACCATTTGACTGGATGGAAGTGAAGTTTTTCCTCCAAATATATTGAAACAAGGTCATGAAACATGTTTAGACTTTCTTCATTACTGGAGACAGTGCAGTATAGAGGTTGGCATCACCCTGATAACCCAGCAAATTACTTACTTGATCTCTGCCTCAGTTTCCTCACCCGTCAGATTTGCATGATATTCTTGCCCAGCCTACCTCACAAGGTTGTCAGCAGAACAAATTTAAATAATAGCTGTGAAAATGCTTTGAAAATGTTTTTAAAGTGCCATGCATGTTTAAAGGAGTTGTTTTTATAGTTACTCAAATCCCAAAACAGGTTATTGTTTTTGTTTTACTGTTAGAAAAGAAACAACATCATTTACGTGAGTGTCTTCAGGGAATATGTCGGCCTTTGACTTTATGGAAGGACAAGTGTAAATAAATGGTCTTTTACTCTTGGAGAGAACTCAGCAGTTGCCTTTTCTCTTACCATCAGTTACGTAAAAAATTAGCACTCAAACATATAGTACTTGGAGGAAAAAGACCCACTGAAATCTGCGAAATTGCTTTTGATAGCAGATGAGCTTATCATTTTTGTATCTGTCATGTTTCATAAAGGATGTAACAGCATCTTTTGTTAATTTGCTTTACAATTTGAATGCCTGATCCTGCTAGACTTTAATTGAATGTGGATATAATCTTTTCAGCCTTGTAAATGGGAAAAATAAACTTTAAAATTGATTGTTAAATGCAGCATTTCCTTGGAAGCCTCCTCAGAACATTATTGCTATGGTTATGAGTGTATGTATCAGTACTTCTCAGCCTGTACATTGTGGATGAGAGCTTTTGCAGGCTGCTTCTCAGCAGCCATTCACTCTAATAAATATTGTTCATGTTTCTTCATATAATAAATTAATTTTTCAATTT EMBV3_36274 TGGAGGCTGAGATCGAAAACCTGTCGTGGAAAGTGGAGCGGGCGGACAGCTATGACAGAG Gene GeneID:505320|ARIH2:XM_002697044:504_cdna UTR3_Alt 2 NULL GeneID:505320 22 GENE ARIH2 NULL ariadne homolog 2 (Drosophila) EMBV3_06143 AGCCCCATCTATCCCCGACTCCTCCAATCCCTTCGCCGCCGCACCGACGTGCGCATCACT Variant GeneID:513983|SCAND1:NM_001079591:1039_cdna 207^552 2 EMBV3_29199 GeneID:513983 13 GENE SCAND1 NULL SCAN domain containing 1 EMBV3_01277 CCTGGAAACAAAAGCCTGTTACAATAAGCAAAACTTCAACCAGAGCGGCTACTTTTCGTG Gene BVT0101_051961 + 0 NULL GK000030.2:84378029-84387995 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11417 AAGGTATATGTGAGTTCCTGTTCAAGGGAGGGGGTCGATGGGTTTTGACCAAGGGTCTAG Gene BVT0102_038859 + 0 NULL GK000016.2:42349475-42376243 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069194 TCONS_00069193 1 XLOC_041887 Coding TCONS_00069194 XLOC_041887 Coding Coding TNFRSF1B 16:42374351-42409772 = TSS51641 4079 1 TCONS_00069194_5 459 0.105908310860505 10 0.885121400338792 0 5.50788722860804e-06 0 0 0 0 0 0 0 2.28809643303027e-06 0.000228307534236119 0 0 0 6.71492006270128e-11 0.00180843170132273 7.85062985548759e-06 0.000787275273529475 0 0 7.16869578872312e-11 0.000521158944604284 0.00167330674133714 7.83030241834372e-06 1.77464835316884e-07 0 0 0.000230403452206421 0.000390992086894011 0.000811578938092144 NM_001040490.2 TNFRSF1B Bos taurus tumor necrosis factor receptor superfamily, member 1B (TNFRSF1B), mRNA. 0.0 3938 100.00 0.534935033096347 NM_001066.2 TNFRSF1B Homo sapiens tumor necrosis factor receptor superfamily, member 1B (TNFRSF1B), mRNA. 0.0 1227 75.39 0.435400833537632 TCONS_00069194_5 sp|P20333|TNR1B_HUMAN TNR1B_HUMAN Tumor necrosis factor receptor superfamily member 1B; 0.0 585 69.53 0.997821350762527 1 coding 1 1 1 1 0.0560621181292974 0.596528201394654 0.032940112324858 0.662247851396147 TTTCAGTCAGAGGCACCGAGGCAGCGGAGCGGGAGCGGACGCTCAAGGGCGCGAGGGCTTGGCCAACCCGCCCGCACCTATGGCGCCCACCGCCTTCTGGGCCGCGCTGGCGGTCGGTCTGCAGTTCTGGGCCGCGGGCCGCGCCGTGCCCGCCCAGGCTGTGTTTACCCCCTACATCCCAGAGCCTGGAAGCTCATGCCGGCAGCAAGAATACTACAACCAGAAGATCCAGATGTGCTGCAGCAAATGTCCACCAGGCTACCGTGTACAGTCTTTATGCAACATGACCTTGGACACCATATGTGCCTCCTGTGAGAGCAGCACATACACCCAGCTCTGGAACTTGGTCACCGCATGCTTTAGCTGTAACTCGCGCTGCAGCTCTGACCAGGTGGAAACTCAAGCCTGCACAACGAAACAGAATCGCATCTGCACCTGCAAGCCAGGCTGGTACTGCACCCTGGGGAGGCAGGAGGGCTGCCGGCTGTGCGTGGCGCTGCGCAAATGCGGCCCTGGCTTCGGCGTGGCCAAACCAGGAACTGCAACAACAAACGTGATATGCGCTCCCTGTGGCCCGGGGACATTCTCAGATACAACATCTTACACGGATACCTGCAAGCCCCACCGGAACTGCAGTTCTGTGGCCATTCCTGGTACCGCATCGACAGATGCAGTCTGCACCTCTGTGCTCCCCACCCGGAAGGTGGCCCGGGGCCCAGCCACCACAAGATCCCAGCACATGGAGCCGACTCTGGGGCCCAGCACAGCTCCAAGCACCTTCTTCCTCCTCCCAAAAGTCCCAAGTCCTCCAAGTTCCCCAGTGGAACAGCCCAACACAGGGAACATCTCTCTTCCCATTGAACTGATTGTGGGTGTGACAGCATTGGGTCTGCTTCTGATAGTTGTCGTGAACTGTGTCATCATGACCCAGAAAAAAAAGAAGCCCTTCTGCCTGCAAGGAGATGCCAAGGTGCCACACCTGCCCGCCAACAAGGCCCAAGGTGCCCCAGGCCCTGAGCAACAGCACCTGCTGACCACGGCGCCAAGCTCCAGCAGCAGTTCCCTGGAGAGCTCGACCAGCAGCACGGACAAGAGGGCGCCCACCAGGTCCCAGCTGCAGTCTCCAGGCGTGGAGAAGGCCAGCACGTCGGGGGAGGCTCAGACCGGCTGCAGTAGCTCAGAGGCGTCTTCCGGTGGCCACGGGACCCAGGTCAACGTCACCTGCATTGTCAATGTTTGCAGCGGCCCTGATCACAGCTCGCAGTGCCCCTCCCAGGCCGGCTCCACGAGGGACACAGACGCCAGCACCCCCAACTCCCCGAAAGAGGAGCAGGTCCCCTTCTCCAAGGAGGAACGCCCCTTTCAGTCCCAGCCAGGGGCTCCAGAGACTCTGCTGCAGGGCCTGGAGGAGAAGCCCCTGCCACTCGGTGTGCCTGATGCAGGAATGAAGCCCAGTTAACCCGGCTGGCCGTGGGCTGTGTCACCGCTGAGCGGGGGCCAACCTCTGGTGCTTCTCCGCCCCTCCCTTCCCCCAGGACTCTGGCTCTTTCTGGGCCAAATTCCTTTGTGCACAGCCTCAGCCTTCATCTCACCTTCAGGCAGAAGAATGAGGCAGGGAGAGTCCTGATGGGTCCTGTCTTGGTGTGTGTCTAACTTGGAAGGCTGGCGGACGCAGATGTGCTGGGCAGCCTGGGACAAGCCCTTGCCTCTCTGAGAGCTGCCCCCCAGCCAGTCCTGCAGTCTTGGCTTCTGGAGCCCTTGTTGTTTTGGGGTTTTATTATTATTTTTTTTTAATCCCTGGACTGTACTCCGCTCTGGCTTCTTGTCAGAGAGGAAGGATGCTGTGTGTATCAGTGGAGAGAGATAGTGGGGAAAGGACAGGCCTTTAGCCTGAATGGGAGACTGTAGGATGGTCCCAGTGAGGGTGGCCATGTGCCATTAAGTCAGATGGTTCTATGCGGGGAGAGGGTGGTGACCCCTATAAGGGTACCCCAGTTAGCTCAGGACCCTGGGCAGCACCACCTCCAAATCCACTCCTGCTATCTCCATCTCATACCATGGGCTAAAAACTGGATGCCCAGAGGGCCCAGGCAGGCAGCCTTCTGAATGAGTGCTGTGACCTGGTTAAGATGCCAAACCTCTAACCGGAAATCTTCCAGTTTAAACTTGTGGCAAAAAAAAAAAAAAGCACTATGGTGCAGACAAACAAGTCACAGTGTAACAAAGCCAGACTCAGAGTTTGCATCCTCTGCCTTTGACCTTCACTCCCATTTACCCACAGTGCCAGCTTCCCCTCCCCCACTGTCTGGTGTGCGGCTCCAAGGCCACACCTTTTCCTATCAGGGAATTTCAGGAACTGGAGATGATTGAGGCCCCGCAGCCATCTCCTCCTACCTCAGCCTGGACCTTCCCCTTTTGCCTCCTGAAGAGGTGTACCTATTTCTCTCGATACCCCTTCCCGCTGTGCCTGAAGTCCCAGGTCCCAGCGGAGCCTCAGAGCCGCTTTGGTACTGGGCCCGCTGAGATCCTGGGTGGACATGAGATGCTGAGAGCAGGTCCTGTGTCTGCGTGTCTGTGTTGTATGTTGTGGTTCTGTGACCCTTGTTGTCTGTCAGGTCAAATGGCCTTCCGGGAACTGAATGAAGTGCTGAAGCCAACACTTGGGCCGATGGATTCTTCCCCATTAAGGAGTCCCCCCACTCCCCAAAATATATGCCCAGGCCCTGCAAATGATGGACAAGTGAGGCCTTAGCCACATTCTGGAAGGAAGGGGGATGGGGGCCTCCTTGAGAAGACAGCTGGATCCCATATACTTGGATCCCTTGTTGAAAAATTCCACTGAACTTGAACTTGGCAGCTGAACTTTTAGAGGGTAGGAAAAGCCCAGCCATTACCCTGGAGTGAAGAAAGGCTTCCCACGCTGGGATCAAGATGTCCCCGTGCCTGGACTGGCCAGAGTCTCCAACCGCATTGGACGCTTTACAGCCGTGGAGCACTTCTGCCCCCTGGTGGACTGTTCTGGGAGGACCTGAGGCTTCCTTGCTGTCACCCCCACAGAGCGGGGATGAATTAGAAGGAGACTCTGGGTGTGGCCTCATTTTGTTACCAGAGTGGCCACTAGACCCTTGGTCAAAACCCATCGACCCCCTCCCTTGAACAGGAACTCACATATACCTTTAAGTCACAGGGTCGGGACACGAAGAAAGAAACTCTAGGAAGAGAAAAATAAAAACTGGATAGAACCAGCTGAAACCAAGATGGAGATGCATCTGACCTCCAGCAGACCCCGAGTCTCAGTTGACACTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGATGCCTGGCATGCTGCAATTCATGGGGTCGCAAAGAGTCGGACATGACTGAGCGACTGAACTGAACTGAACTTACTACATTAGCTACTAAATGACTTACCTACTGGTCTCCGTGACCAGGAATCACTGACCAAAAAAGGACAGAAAAGAGGTGGCACCTCATTTCTAGGAAAACCCTGCCTCTTTCCCAGAAAACGAGAGCATTTGCCTCCCCACCATTCCTCGCACTCTTCCCCCCATTGCTCTTAACAGCAAATCTGGCTCCACATTAAGGCGAGAAGTTTGTTTATCAACGGTTAATAAGTTCCCACTTCTCCATTCTCTGACCAATGAATAAAGCTTGTGCTGCTCTAATCTCAGCTTCCATTTTGGGTTTGGTTGTGTGAACCCAAACAGAAAAAGAACCTTCTCTGCCAAGGAAGGGGGCCTTGGCCAGGCTAGGGCCCAAGTGCTGGGGGGAGTCCATTTGACCTAACTGATAACAATTTTCCTGGCTTGTGGGCTTGTGTTGATCCCAAGGACAAGGAGAGTTTGCACTGTATGTATTCTGGACAGCATTCCTGCTTATGAATAAACCTTTTATTTGTTTTTTATTTTGACTGATGGCTTTGTCTTCAGGTCTGAGCTGGGGTGTGTCCTTGGTCCTGGTGCCTGTCACCAAGGTAAGGGGGAGAATGGGTCTTGGCCACTGGAGTCTGATAAGTCCATTCTGTGCCAGACCCTAGAAGCACCCGCATTACAGC EMBV3_23158 AGAAGTTACCCTAGAAGGTGTCCTCATGGGCGTCTCTTGTAGTCAAAACCCACAGTCCCC Gene BVV0102_169524 + 0 NULL GK000028.2:3333980-3346616 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25889 CCACAAAGATAAACTCTTACAACATAAATAGCGCTTTTCTCATCCCCGGAGGTCCTGGTG Gene GeneID:540528|NR1H4:NM_001034708:34_cdna UTR3_Alt 2 NULL GeneID:540528 5 GENE NR1H4 MGC127466 nuclear receptor subfamily 1, group H, member 4 EMBV3_13962 GGATGTGATCTATCCTGGAGAAGGTTCCATGCGCGCTTGAGAAAAAGGTGAAATTCATTG Gene BVV0102_096027 - 1 EMBV3_41070 GK000018.2:3198097-3462168 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233373 TCONS_00218178 TCONS_00010367 TCONS_00019963 TCONS_00019989 TCONS_00022064 TCONS_00244651 TCONS_00166080 TCONS_00224115 TCONS_00250553 TCONS_00229820 TCONS_00135549 TCONS_00231277 TCONS_00165811 TCONS_00136829 TCONS_00129726 TCONS_00197449 TCONS_00249014 TCONS_00031938 TCONS_00064816 TCONS_00198626 TCONS_00020176 TCONS_00198800 TCONS_00221437 TCONS_00177994 TCONS_00251889 TCONS_00148277 TCONS_00210178 TCONS_00017462 TCONS_00023334 TCONS_00117178 TCONS_00048822 TCONS_00244653 TCONS_00152648 TCONS_00198662 TCONS_00055859 TCONS_00250261 TCONS_00244654 TCONS_00056147 TCONS_00141422 TCONS_00207067 TCONS_00254568 TCONS_00249913 TCONS_00197973 TCONS_00032586 43 XLOC_142855 XLOC_131641 XLOC_005918 XLOC_010641 XLOC_010667 XLOC_012735 XLOC_150512 XLOC_100918 XLOC_137411 XLOC_153496 XLOC_139314 XLOC_081772 XLOC_140766 XLOC_100651 XLOC_083040 XLOC_078439 XLOC_119110 XLOC_151957 XLOC_018183 XLOC_039540 XLOC_120280 XLOC_010854 XLOC_120453 XLOC_134752 XLOC_107767 XLOC_154830 XLOC_090159 XLOC_128688 XLOC_009039 XLOC_014001 XLOC_071344 XLOC_028953 XLOC_092413 XLOC_120316 XLOC_033667 XLOC_153204 XLOC_033950 XLOC_085850 XLOC_125586 XLOC_157500 XLOC_152856 XLOC_119632 XLOC_018826 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_05064 GGTTGCAAGAAAAAAGTTGAGATGGCAAGATGCGCAGGGGAATGCAAGAAAACCATCAAG Gene GeneID:286841|MUC12:XM_002687375:9_cdna Constitutive 1 NULL GeneID:286841 5 GENE MUC12 BSM mucin 12, cell surface associated EMBV3_02505 TGACTCAAGCTGAGAACTGAGAAATACGAAGGAGCAAGTCATGAAGCTGAGTGAGGGGGA Gene BVT0102_238992 + 0 NULL GK000008.2:103512718-103577523 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28310 TCTACACAGCCCCATTTACTTCTTCCTCAGCTGGCTGTCACTCATGGACCTCACGCTCAT Gene GeneID:100336415|LOC100336415:XM_002683951:3_cdna Constitutive 0 NULL GeneID:100336415 Un GENE LOC100336415 NULL olfactory receptor 1395-like EMBV3_40720 ATGCTGTACTACGCGCTCAAGGTCTTGCTGTCGGCGCTGCTGATCGTGGTCATCACCGAG Gene GeneID:100301201|LOC100301201:XM_002683924:5_cdna Constitutive 0 NULL GeneID:100301201 Un GENE LOC100301201 NULL hypothetical protein LOC100301201 EMBV3_04836 TGCCTGTAAGGACATAATGCGCTTTATTCACATCAAATAGTAAACATAGATCTGATGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08640 TCTTTCACGGAGGGTGTGTGGCTCTCATCTTTCTGCCGCTATCTCCATTGCTGTCCGTTT Gene GeneID:509584|TBC1D13:XM_002691637:336_cdna Constitutive 0 NULL GeneID:509584 11 GENE TBC1D13 NULL TBC1 domain family, member 13 EMBV3_24914 CTTCTTTTCCACACTCCTTAAAAGTCTCACAACCACTGAAGCCCACTCTAGAGCCCAGCG Gene BVT0102_340997 + 1 EMBV3_41871 GK000015.2:28422343-28431027 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060838 1 XLOC_036850 NonCoding TCONS_00060838 XLOC_036850 NonCoding NonCoding - 15:28429494-28430881 - TSS45423 708 2 TCONS_00060838_2 55 0.224576271186441 2 0.490620490620491 0.00036512339917963 0.00140507689551856 0.000235271141312123 0.000105561286212307 0 1.51569932703591e-05 0.000560108163506302 0.000735163146751603 0.000178308887221047 0 0 0 8.10533664092795e-06 7.3084654132388e-05 0 0 0 0 0.00216748300618804 3.04721360055135e-05 0.000197236351660713 0 0 0 0.000264221098343827 0.000358243306775963 0.000558605709662275 0 0 0 XM_005215554.1 LOC100848558 PREDICTED: Bos taurus uncharacterized LOC100848558 (LOC100848558), 1e-16 91.5 74.84 0.216101694915254 0 noncoding 0 0 0 0 -0.024062686601279 0.827958296501345 -0.0181139239822388 0.721953093668708 AGGATCATTCACAGTATCGACAGTAACATGTATTAACTAAGCTTTGCCTTGGCTACCCTGGGTTCAATGATCTGCAAGACAAATGCGAAAACCAGGGAGCGAAAAAAGTGAAGTTACTTGTTTGGTGAGAAAGATGGATCACCTGGAGCAAATCCTCACAGCCTTCCTAGGGGAGATGCATCTGGCTCCTGTTAAGCCCAGAATCTAGTCCCAGCACCACTCAGGGCCTGATCCCAGAAGGAGGAACTCAGACCAGTGTTCCTGTGGATACCAAAGCAGATATCCAGAATGTATTCCTCATGTTTAACTTCAAGTCTTTCCTGTGGCAGTGCTGCCTATGCTCCTTATTTTTCTGACTGTAGATGACAGATCATGACTCCCTCTTCTTTTCCACACTCCTTAAAAGTCTCACAACCACTGAAGCCCACTCTAGAGCCCAGCGCTCTGCAACAAGAGAAGTTGCCACAATGAGAAGCCCCTATACACAACTAGAGAATAGCCTCTGCTCACTGAAATTAGAGAAGGCCTGAGCACTGCAGTGAAGACCCAGCACAGTCCAAAAAATAAGTCTCATAGAGAGGCCAAGGGACGGACTGGGAAGAGACTCTGAGAACTCACCAGTTCATCCACCACGGTCCTTGCACAAAACTGGGGTTCAATAAATCATTCATAGATTTGGTCCCTCCATCCAAGAACTCACAATTAATC TCONS_00058659 TCONS_00058659 r 5' 0 TCONS_00058659 TCONS_00058659 r 5' 0 EMBV3_31150 CCTCCCTGCTGGGGCACTTTCCACCAATACTCTCAACTCCTACTTGCCCTAGAAACTCTA Gene GeneID:514665|SYPL2:NM_001075676:104_cdna UTR3_Alt 2 NULL GeneID:514665 3 GENE SYPL2 MGC143415 synaptophysin-like 2 EMBV3_03807 TCCCCCCACTGTATAATTCATTTTCATGCAAACTCTCAGGAGACTAGTATGTTTCTGGTT Gene GeneID:514634|CLDN23:XM_002698685:27_cdna Constitutive 0 NULL GeneID:514634 27 GENE CLDN23 NULL claudin 23 EMBV3_09563 CTGCAGTTTATTGAGGGCATTTCAGCTCCTCCTACCACCTCAACAGGACTTCGTCCAGAC Gene GeneID:516723|LOC516723:XR_084644:261_cdna Constitutive 0 NULL GeneID:516723 23 PSEUDO LOC516723 NULL similar to tripartite motif-containing 39 EMBV3_27662 GGGACAGGGACCTGGGGGCGGCCACGGCAGATTATTGTGGACGATGATGATAGTAAGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03317 CATTGTCCAGTACATCCTTGAGCTTGTCTTACACTAAGTACTTTGCACCTCCTGCTCCCC Gene BVT0102_124629 + 0 NULL GK000014.2:2218828-2227349 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04690 TGTATAAAATGGGGGCGGGGGCCAGGGTGGAGGATGAGGATTCTCTTGTAAGGTTGTTGT Gene GeneID:535260|FAM151B:NM_001099713:10_cdna UTR3_Alt 2 NULL GeneID:535260 7 GENE FAM151B NULL hypothetical protein LOC535260 EMBV3_31319 AAGAGGTCTCCCGGATTTCAGCCTCACAGACAAGCGTGCCATTTGACCACCTCGGGAAGT Gene BVT0102_143806 + 0 NULL GK000005.2:110536723-110564581 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196424 TCONS_00196427 TCONS_00196426 TCONS_00196428 TCONS_00196432 TCONS_00196431 TCONS_00196425 TCONS_00196429 TCONS_00196430 1 XLOC_118335 Coding TCONS_00196432 XLOC_118335 Coding Coding CSNK1E 5:110559321-110596325 j TSS146170 1057 1 TCONS_00196432_2 226 11 0.971732021727968 0.00546221463958204 0.00338410924048431 0.00495079812690805 0.00421698317010359 0.00131831704312204 0.00127476023853802 0.00329537298338152 0.00454354581669938 0.00314777910191425 0.000876402766602414 0.000195995089274939 0.000472848963350098 0.000368310671340099 2.18038919769879e-08 0.000726219422206756 0.000283846898259128 0.000905835869870984 2.78780164925138e-11 0.001250282734948 0.00607619514821242 0.000829929630329705 1.55301351348627e-20 0.000147518972163906 0.000768757083045991 0.00408249840784665 0.00404288608750622 0.00271366459643153 0.000123430304121796 3.94066052184533e-20 2.66719030206123e-05 NM_001078109.1 CSNK1E Bos taurus casein kinase 1, epsilon (CSNK1E), mRNA. 3e-159 565 100.00 0.295175023651845 NM_152221.2 CSNK1E Homo sapiens casein kinase 1, epsilon (CSNK1E), transcript variant 0.0 1177 90.72 0.804162724692526 TCONS_00196432_2 sp|P49674|KC1E_HUMAN KC1E_HUMAN Casein kinase I isoform epsilon; 2e-162 460 98.67 0.991150442477876 0 coding 1 1 1 1 1.13106172409084 0.0817561643541231 -0.50091001272154 0.00102714333668883 CCCGCCCCTGGCCGGCTCCCTCCTTCCTGCGCGCGGCGCGCTCGCAGAGTCCTCACCTGGAGGGACAGGTGTGCGCATCTGGCATCGGAGGCCAGCCCACGAGTGTCAGGTGAGCGAAGTCCCTGGGGCCAGGGGGCGTCCCAAGTGAGGGCAGGGGTACCTGGCGGCCTCCCACCCACCAGCTGATGCGTCGAGACGACCTGGAGAGTCTGGGCTACGTTCTCATGTACTTCAACCTGGGCTCCCTGCCCTGGCAGGGCCTCAAAGCAGCCACCAAGCGCCAGAAGTACGAGCGGATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCAAAGGCTACCCCTCCGAGTTCTCCACATACCTCAACTTCTGCCGTTCGCTGCGGTTTGATGACAAGCCCGACTACTCCTACCTGCGCCAGCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTCCTACGACTACGTCTTCGACTGGAACATGCTCAAATTCGGTGCAGCCCGAAACCCCGAGGACGTGGACCGGGAGCGGCGAGAACACGAGCGAGAGGAGAGGATGGGGCAGCTCCGGGGGTCGGCAACCCGGGCCCTGCCCCCTGGCCCACCCACGGGGGCCGCTGCCAACCGGCTCCGCAGTGCAGCCGAGCCTGTGGCTTCCACCCCTGCCTCCCGTATCCAGCAAGCTGGCAATACTTCTCCCAGAGCGATCTCACGGGTCGACAGAGAGAGGAAGGTGAGCATGAGGCTACACAGGGGCGCGCCTGCCAATGTCTCGTCCTCCGACCTCACTGGGCGGCAAGAGGTCTCCCGGATTTCAGCCTCACAGACAAGCGTGCCATTTGACCACCTCGGGAAGTGAGGAGGAGCCCCCATCGGACCAGTATTTGCTTAGTGTCTTCACTGTATTTTCTTTAAAAAAAAACAAAAAACAAAAAACAAAAAGATGGGGAAAAGAAACCACTCAAAAGAACAAAAAGAAAAAAACCCAGCACAAAACCAACGATGGATTCTGTTTCGAATTTTTTTTTCTTTTTTTTTTTTTTTTTTTAA EMBV3_15897 GAATCCAGATGCTGACTAACCAGAAGCAAGGACACTGCTATGGAGTGGTGGCTGACTGGT Gene GeneID:537502|ANKLE1:XM_002688578:281_cdna Constitutive 0 NULL GeneID:537502 7 GENE ANKLE1 ANKRD41 ankyrin repeat and LEM domain containing 1 EMBV3_17182 TCAGAAAGCTCCCAAACCACTTTTCCGGTCTGGAGGAGAGCAACAAACCCAGTCCCTACT Gene GeneID:774023|INSL6:NM_001077521:66_cdna Constitutive 0 NULL GeneID:774023 8 GENE INSL6 MGC133604 insulin-like 6 EMBV3_31488 TCAAATGCCATGAGAGCCATGAATGGAGAGTCTCTGGATGGTCGTCAGATCCGTGTAGAC Variant GeneID:509771|RBM3:NM_001034363:51_cdna 313^809 2 EMBV3_16339 GeneID:509771 X GENE RBM3 MGC128854 RNA binding motif (RNP1, RRM) protein 3 EMBV3_35581 ACGCGGACATCATCTTCGACATAACGGATGGGAACCTCCGTGACTCTTTCGACATCATCA Gene GeneID:514588|FBLN1:NM_001098029:6_cdna Constitutive 0 NULL GeneID:514588 5 GENE FBLN1 MGC148755 fibulin 1 EMBV3_43580 GCGTCGCGCCTGGCACATTATAACAAGCGTTCAACCATCACATCCAGAGAGATCCAGACA Gene GeneID:100335534|LOC100335534:XM_002697534:284_cdna Constitutive 0 NULL GeneID:100335534 23 GENE LOC100335534 NULL histone H2B type 1-A-like EMBV3_18152 AGCCTACTAGAGGGCCAGGACTCCAAGTTGATCGGTTTCACCACAGGAGGAAACTCCGGT Gene GeneID:100296555|LOC100296555:XM_002695990:366_cdna Constitutive 0 NULL GeneID:100296555 19 GENE LOC100296555 NULL similar to keratin 13 EMBV3_35908 CACCATCCCTTCTCTAACCACAAACCAGCTGATGTGTTTTTAATCTGTTCCTCATCCATC Gene GeneID:537453|PATL1:XM_002693813:60_cdna Constitutive 2 NULL GeneID:537453 15 GENE PATL1 FLJ36874 protein associated with topoisomerase II homolog 1 (yeast) EMBV3_06639 AGGCTTAGTCTAAGAACCTAGAGTCTCTGTGTCTAAGATTCCAGATCATATGCTTCAAGA Gene GeneID:516598|AXL:XM_002695068:452_cdna Constitutive 0 NULL GeneID:516598 18 GENE AXL NULL AXL receptor tyrosine kinase EMBV3_16343 TCCACTCAAACTGCCAATGACCAGGAAGGGTAATGTTGGAAACAATCGGGTGTGGATTGG Gene BVV0102_084612 + 0 NULL GK000010.2:46979998-47056201 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017176 TCONS_00017174 TCONS_00017172 TCONS_00017173 TCONS_00017175 1 XLOC_008980 Coding TCONS_00017174 XLOC_008980 Coding Coding TPM1 10:47050098-47073002 j TSS11792 1621 1 TCONS_00017174_2 248 8 0.92957254508143 0.00156640387287909 0.00144205610703502 0.00248878662467932 0.000857371282540564 0.00131051262562511 0.000518372928331898 0.000350433094533401 0.000964443223470962 0.0013939679031876 0.0006416920919787 0.00180456670389931 1.94920482240932e-07 8.2479509643202e-08 0.000160539317748542 2.17554896466648e-07 0.0870482142248398 0.0469383540256148 0.0963562190549898 0.00254423038189935 0.00374034479902055 0.00162378357495384 0.0646428140736448 0.0383294882112832 0.0336055164344258 0.0051640398708678 0.00530443852823187 0.00289427282292313 0.0121333538924129 0.00712446502507421 0.012971553037635 NM_001013590.2 TPM1 Bos taurus tropomyosin 1 (alpha) (TPM1), mRNA. 0.0 820 94.01 0.328809376927822 XM_005254652.1 TPM1 PREDICTED: Homo sapiens tropomyosin 1 (alpha) (TPM1), transcript 0.0 1820 85.38 0.958050586057989 TCONS_00017174_2 sp|Q6IRU2|TPM4_MOUSE TPM4_MOUSE Tropomyosin alpha-4 chain; 4e-118 342 75.00 0.995967741935484 2 coding 1 0 1 1 -0.449137633713577 0.0422512538582173 -0.0360347920566026 0.662658378419655 CCGCAGCAGCAGCAGGAGCGCAGCAGCCCGCCTCTCCCACCGCAGCCCGCCCGCTTGCCGGCCCGCCGCCGCTCGGCGCGATGGCGGGGAGCAGCTCGCTGGAGGCGGTGCGGAGGAAGATTCGGAGCCTGCAGGAGCAGGCGGACGCCGCGGAGGAGCGCGCGGGCAGCCTGCAGCGCGAACTGGACTACGAGAGGAAGCTGAGGGAGACCGCTGAAGCCGACGTAGCTTCTCTGAACAGACGCATCCAGCTGGTTGAGGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAACAGCTCTGCAGAAGCTGGAGGAGGCCGAGAAGGCAGCAGATGAGAGTGAGAGAGGCATGAAAGTCATTGAGAGCCGAGCCCAAAAGGATGAGGAGAAGATGGAGATTCAGGAGATCCAGCTGAAAGAGGCCAAACACATCGCTGAGGATGCCGACCGCAAGTATGAAGAGGTGGCCCGTAAGCTGGTCATCATTGAGAGTGACCTGGAGCGTGCAGAGGAGCGGGCTGAGCTTTCAGAAGGCCAAGTTCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTACTCGCAGAAGGAAGACAAATACGAGGAAGAGATCAAGGTCCTTTCTGACAAGCTGAAGGAGGCTGAGACTCGAGCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAGAAAAGCATTGATGACTTGGAAGAGAAAGTGGCTCATGCCAAAGAAGAAAACCTTAGTATGCACCAGATGCTGGATCAGACTTTACTGGAGTTAAACAACATGTGAAAACCTCCTTAGCTGCGACCACATTCTTTCATGTTGTTTTATCTTTTTGTTTTGTTTTGTTTTTAAACACCATGCTTACCATGAAACCCCTTAATGCATTTTTTATTTACTTTCACCACTGTCACAAAAACATCCACAGGATACCAGCTAGATCGGGGGTGGGGAAGACACACACACAGGCAAGCCCGTGTTCAAGGTGACAATGATTTAAATGTGCCATTTCCCAAGTTGACATTGCCACACCGTAGAGAGTTTAGCGACACAGTATGCTTAGTCAGTCCAGGAATCCTTGAGGAAGCAGAAAGATTTCCACTCAAACTGCCAATGACCAGGAAGGGTAATGTTGGAAACAATCGGGTGTGGATTGGTGCTACTTTAAACAAAAGGTCCCACTATGGTCTCTCCTTAAATATTGTACGATTTAGAAGTCTGTCCAACACTAATTTATTTTGTTGTGAGTTTTACAATGAGGTGAGACTGTGGATCCTGTCTGTCAGAATTCACTAAAGCTGAAGCTTTGTAAGCCACTGTGCTCTTCTAATTGGCGTATTTGCAGCTCGTTACAACTTGTGGGATAGCATGCGATGTGGATTTCCAGCATGTTCAAGTGAAAGATGTGGGCACCACATACAATGGTGAAGAAAACACATTGTCTTAAGAGTTACAACTGTATGGAAGCCTTGTACAATGATATGGAATAAATGCACATTGTAGGACGTTTTCTAAACAGGGTGGTCCTGTCGTTTGTCCGTTTTTACTTTGTGAACTTCAGATCGCGTGAATGACCTACCTTC EMBV3_17862 TTCACCAGTCTGAGGGACAGGGTGATGTCTGCATAATACTGAGGCTCCACTCAGGGCTTT Gene GeneID:781426|NOD1:XM_002686839:42_cdna Constitutive 0 NULL GeneID:781426 4 GENE NOD1 NULL nucleotide-binding oligomerization domain containing 1 EMBV3_24757 AGTAGACCGGTGTGTCGCATAAGCCCTCTTGGAGGCCATTGCCATTAATTCCACCATAGT Gene BVV0102_067803 + 1 EMBV3_30112 GK000002.2:65527198-65677507 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00109780 1 XLOC_065684 NonCoding TCONS_00109780 XLOC_065684 NonCoding NonCoding - 2:65672437-65673114 - TSS81401 677 1 TCONS_00109780_2 118 0.0620384047267356 1 0 0 0 0 0 0 0 0 9.70739300090412e-07 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000328832498058899 0 7.42892808367741e-05 0 0 0 0 0 0 XR_139113.2 LOC100849044 PREDICTED: Bos taurus uncharacterized LOC100849044 (LOC100849044), 1e-130 470 78.45 0.871491875923191 0 noncoding 0 0 0 0 0.0481744103386602 0.732687813329164 0.0403114743888238 0.394857655396513 GATTGTGGTTATCAGTTTGTCTGCCCTCTGATGGAGAAGGATAAAAGGCTTATGGAATCTTCCTGATGGGAGAGTCTGACTGAGTGGGAAACTTGGTCTTGTTCTGATGGGCAGAGCCATGAATGGGCAGTAAACCTTGAATCCAATTTTCTCTTGATGGGTGGTGCTGTGTTCCTCCCTGTTATTTACCTGGGGCCAAACTATGGTGGAGATAATAAAGATAATTGTGACCTCCTTTAAAAGGTACCATGCAAGCACTGCTGCATTCAGTGCCCCCAATATTGCAGCAGGCCACCGCCAACAACCCACACTCTGCCAGAGACTCCTGGATACTCCTGGGCAAGTCAGGGTCAGTCTCTTGTGGGGTCACTGCTCCTTTCTCCTGGGTCCTGGTGCACACAATGTTTTGTTTATAACCACCAAGAGTCTGTTTCCCCAGTCCTGGGTATGTTCTGGCAGCACTATGGTGGAATTAATGGCAATGGCCTCCAAGAGGGCTTATGCGACACACCGGTCTACTGCACCCAGAGCCCTTGCCCCTGCAGCAGACCACCACTGACCCATATCTCCACAGGAGACACTCAAACACAATTATGTCACAGTCTCTGAGGAATCTCTGGGTCCTGGGCAAAGCTCAGTTCAGTTCAATTGCTTATTCATGTCCAGCTCTTTGCAAC TCONS_00105489 . 3' 4394 TCONS_00105489 . 3' 5070 EMBV3_25603 TGGCAGGGCTCTAGGTCCTGGCTTGGAGGTGCTAATAAATGGTATTTTACTCTACTGTAG Gene BVT0101_024775 + 0 NULL GK000028.2:24915405-24917631 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159268 TCONS_00159262 TCONS_00159265 TCONS_00159263 TCONS_00159269 TCONS_00159264 TCONS_00159256 TCONS_00159257 TCONS_00159270 TCONS_00159258 TCONS_00159267 TCONS_00159261 TCONS_00159266 1 XLOC_097381 Coding TCONS_00159256 XLOC_097381 Coding Coding HNRNPH3 28:24904361-24917456 j TSS119378 4523 1 TCONS_00159256_3 346 0.0236568649126686 10 0.655338322895983 0.00463298937980023 0.00267785088295272 0.00374775728150478 0.00289001523693709 0.00304622533568661 0.000627137165938551 0.00148336929141211 0.00194799027716999 0.00291516006968544 2.98492253106614e-05 2.33180109396832e-05 4.19617298741386e-18 0.000111720419077572 7.18258744853103e-06 0.000143934769610808 4.61786327992718e-28 1.47885965240567e-19 0.000150051404929861 0.00136443617911665 0.00140787017594052 0.000403467792527867 0.000682862099528929 0.000332913282432636 1.62936511504236e-15 0.00294721248836584 0.00244741884167816 0.00317645406402561 0.000246388972227701 5.56141627666513e-05 0.000147129916893537 XM_005226439.1 HNRNPH3 PREDICTED: Bos taurus heterogeneous nuclear ribonucleoprotein H3 (2H9) (HNRNPH3), transcript variant X2, mRNA. 0.0 4221 99.20 0.526199425160292 XM_005269748.1 HNRNPH3 PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein H3 (2H9) (HNRNPH3), transcript variant X1, mRNA. 0.0 3103 88.65 0.531063453460093 TCONS_00159256_3 sp|P31942|HNRH3_HUMAN HNRH3_HUMAN Heterogeneous nuclear ribonucleoprotein H3; 0.0 678 100.00 0.997109826589595 2 coding 0 0 0 0 0.00155987291394225 0.990266473686995 0.0144543029226847 0.792315613845871 AACAACTCTTTTGTCTCGCGAGAGCGGGGCCGGCCGGACTCCCTAGCTCTCGCTCCACCCACTTCTCCTCGCTCGCTCTCTCCCATCCCCCCAAGCCAGTAGCTCTGCTGCGCAGCTCCCTTAGCGGTTGCCACCGCTGGAGACGGTTGGAAGAACCGTTGTGGGAGCTCTACCCGAGGCGGGCGACTTCTACTTCCTCACAGCCAGACCCCGCGAGCACCGGAGTCGGCGCTACTGTCGCCCGACAGGGTATCTGAAGTAAAAGGGGCATTTAAATCAAACGGTATTGAGATGGATTGGGTTATGAAACATAATGGTCCAAATGACGCTAGTGATGGGACAGTACGACTTCGTGGACTGCCATTTGGTTGCAGCAAAGAGGAAATAGTTCAGTTCTTTCAAGGGTTGGAAATCGTGCCAAATGGGATAACATTGACGATGGACTACCAGGGGAGAAGCACAGGGGAGGCCTTCGTGCAGTTTGCTTCAAAGGAGATAGCAGAAAATGCTCTGGGGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAGATCTTCAGAAGTAGCAGGAGTGAAATCAAAGGATTTTATGATCCACCAAGAAGATTGCTGGGCCAGCGACCAGGACCATATGATAGACCAATAGGAGGAAGAGGGGGTTATTATGGAGCTGGGCGTGGAAGTATGTATGACAGAATGCGACGAGGAGGTGATGGATATGATGGTGGTTATGGAGGTTTTGATGACTATGGTGGCTATAATAATTATGGCTATGGAAATGATGGCTTTGATGACAGAATGAGAGATGGAAGAGGTATGGGAGGACATGGTTATGGTGGAGCTGGTGATGCAAGTTCGGGTTTTCATGGTGGTCATTTTGTACATATGAGAGGACTGCCTTTTCGTGCAACTGAAAATGATATTGCTAATTTCTTCTCACCACTAAATCCAATCCGAGTACATATTGATATTGGAGCTGATGGCAGAGCAACAGGAGAAGCAGATGTAGAGTTTGTGACACATGAAGATGCAGTAGCTGCCATGTCTAAAGATAAAAATAACATGCAACATCGATACATCGAACTTTTCTTGAATTCAACTCCTGGAGGCGGCTCTGGAATGGGAGGTTCTGGAATGGGAGGCTACGGCAGAGATGGAATGGATAATCAGGGAGGCTATGGATCTGTTGGAAGAATGGGAATGGGGAACAATTACAGTGGAGGATATGGTACTCCTGATGGCTTGGGTGGTTACGGCCGTGGTGGTGGAGGCAGTGGCGGTTATTATGGGCAAGGTGGCATGAGTGGAGGTGGATGGCGTGGGATGTACTAAAAGCATAACCACACATACAAAAGTCCTGACAACAGCATCTGGTCTACTAGACTTTCTTACAGAATTACTTTCTTTTGTATTTTAAGAACTTTATAATGACTGAAGGAATGTGTTTTCAAAATATTATTTGGTAAAGCAACAGATTGTGATGGGAAAATCTGTTTTCTGTAGGTTTTATTTGTTGCATACTTTGACTTAAAAAAAATAAATTTTTATATTCAAACCACTGATGTTGATACTTTTTATATAGTTACTCCTGAGGATGTGCTGCTTTCATAAGATTTGGGTTGGTGTATTTTACTATTAGCTCTACACGAAGTAGTTTAATCTTAAGAGGACAATGGTTCACCTCTGCATAAACTACAAATCTTAATAAGCAGACATCTGGAATAGAGCTTGGAGAATAATTAGTGTTACTTTTTAATTTCTCCTGGACAACACTGTAAATATAAAACCTAAAGATGAGTTTAGGTAACTTCAGGAGTATAAATTGGCTAATTCTATATTTTCAGACATTTATCTGGCATAGCTCTGAAATGTTAAAAATCCAGGAGGTATCTGGACTTAATGTATATTCATAATTGTGTTACCTGCAGATGGAAGTGTTGGAAGTTTAGATTCTAGCTCTAGACTTTAGAAGAAATCCCCTCAGCACTTGACTGAAGTACCAAAAAAATGTTTCCCAAAAGTGATAGTTGTAAGTTCTCAAAATGTCTTAGATTAGGTTAAGGTTCTCGGTGACAAGAGATTCACTACAAGTACAAAGGTATTTACCGTGGAGTATAATTCTCACAGGTGTATTCCGTTTCCAGCCAAATAGTTAAAGCATATGGCTTTTAAACTAACTGTATAGATAACTACTTTTTAAAAATGTAAGACACAAGTCTGTGTCTTGAGAGTGTTGAGATTGGATTCTGCATCTAATTTGTTTCGAGTTTTAGAGCCATTGTATTTAATAATTTTATGTAGCAAGGAAAAAAGGTGCTTTATTTTTAATCCCTTTGATCAATATGGCTTTTCTTCCAAATTGGCTAATGGATCAAAATGAAACCTGTCAATGTGAATTTAGTTATTGAACTTGTTACTTGTTTTTGCTAGAAATGTTATTAATGTAATAAATATCAGTATGGGAGATGAGTATGGCGTCTGTCCTAGAATGCTTTGTTGTCAGTTAATGATTAGAAACCAAATTGGTAGAAGGTACTATATCTAATTGAATATTAGACAAAGTGACAAAGGAATAATTGCTGCTGCTGTTAAAGAAGGCAGCTTGGTAGCATAAGTGGAACCTATCAACTGGAGCAATGATTCATCTTACTGCCTGTACTCACTCCCTTAATTACTAGGCTCACACCACTTTTCTAAAACAGGCTTAATTTTTCAGGTGTTTTATTTGTCATATAAAATTCACATTTTAGAGAAGTGTGAATATGAGAATTAACAATCACAATTCCTTGGCACCATGATAGCATTAGGTTACTACTAGATGAGGGTGTAACAGTACACAAAGTGCACAAAATACACAGTTCTATTACATGAAATCCAAAATTAGATTATGGTTTTTAGATACAAGTCAAAACAAAATGGAGCAAGTTTCAGTATTTTCTTAGAAAAAGCCTGCCTGCAAAAGACCCAAATCAATGGCAATAACATGAGTGGTGAAGAATTTAAATTGGGACTAAAAATCATGGTTTATTTGTTGAATGAAACCAGGGTTGGTATTTAAGAGAATCACATTTTAAAGTTTAAGCACAATAATAAAAAACAGCACTTGAAATTTTTCATTTTTGCTTATTCTCGTCATAAAAATGTTAACCCATCCCATCAGTACAAAACAGTTCAAAGAATATAATTCATGTTTCAAATACTCCTATCAGAGCATTAAAGACCACCTATAAATCTGTATGTCCATTCTGATTGAAGACTAAAAACTGGATTATGGAAAAGAAATCTGAAAGTAAAACAGTGGTTTCATACTTGGGCAACTTAGAAAATTAATTTTAAACCTCAACAGAAGTATGTACTCAGGATAACGATCCTGTAGAATAAGCAGTGCTATCTTAGTGGGGAGGGAGTAGCCATGCTTTATTTAGTAGTGCTCTTAGGAGTAATGTGGATACCAATAATGGCATGTTTAAAAGGTACAAACTCAAAAGTGCATGACTTAAGACTTAAAAAAGTAGAACCCCAAGTGGTGATGCTGTTGAAACGGTTAATTATACAAGGGTAGTTTTAAAGATTAATTAAATTCTTGGTATGCTATAAACTATTAACAGGGATTAGTGTTTACTGACTTTATGCTTGAAATAGTTCAAGTATATATGTAATGGCAGGGCTCTAGGTCCTGGCTTGGAGGTGCTAATAAATGGTATTTTACTCTACTGTAGTAGACTGCCACAGTGTAATGCTTCCTAAAAGTTACTGGGCTGGAAAGGTAATACAGAACTTTTTTTACTCAAACCTGTCATAATCAAAGGCAAAGTTTAACTGTATTTTAGATTTGTCCTTAAATGCTAAGGGAAAATCAGGAGCCTATAATCCTGGCTATTACATTTTTTTCTAGGAAAATTTATGTTTTGACATTTTTTTGGCCATGCCCATGTGGTATGCAGGATCTTAATCCAGGGATCCATCCTGTGCCCCCTTGCAGTGCAAGTGTGGAGTCTTTACTAGACTGCCAGAGCAGTTCCTATGTTTTGACTTTTAAAGGTGTGAGTCCCCCCTAAGAAATGGATATAACTTTTCAAAGTATTTGGAGACAAAGTAATACCTCTTTAAACCACTATATCTGAAAGTTCAGCAAAATACCACATTGACTATAGAGAAGGAAGGCATTTTCTAATGCAAAATGGGCAGAGGAGGGGAAGCAGATAAATACAGTTGACACTTTACCAAGGTAATGAAAAACCTGTTGAAATAGTAATACTAAAATGTGCATTTCCAGTCGTTCTTGGAACTGTGAGTCTTTAAAGTGCATTAAGAAAAAATTACAGGCACCATCAAATATCAATTTGACAATCTGGAGAAGAATAATCTGAAACTATTTTTCAGAAGGCCTTTGCAAAATAAGGCAAACATGTAGGCTATGCTCTCTGGCCTCTCCATGGCATTAAGAAAAGAGTTACATGATAACTACAGTCAGGAATTAGGCTGAGGTTACTTTTAAAGCATGCCCTGTTATTTGAATAAAA EMBV3_41097 CTGTTCGGCTGCGTAGCTTTTTTGTGGTGAGTTATAGGAGGCCTTGAAGATGTCCTCCAG Gene BVT0102_018886 + 0 NULL GK000005.2:106216758-106223070 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196264 TCONS_00196267 TCONS_00196265 TCONS_00196263 TCONS_00196266 TCONS_00196268 1 XLOC_118291 Coding TCONS_00196263 XLOC_118291 Coding Coding C5H12orf5 5:106218593-106227687 j TSS146091 5604 1 TCONS_00196263_1 192 0.268379728765168 4 0.384141647421093 0.00374599899720163 0.00307219359569272 0.0014774428583536 0.00334138477084682 0.00262135788326464 0.00153532697414601 0.00199619710500197 0.00264551205557579 0.000515367171097247 1.86794047308044e-07 2.69127995472829e-26 0.000161244120624776 4.83829038386121e-05 0.000334214790732149 0.000304394492026018 0.00165826917115486 0.00379718109699569 0.00250587711576681 0.00299261884442823 0.00168275584404503 0.0033223373675265 0.000917458346256295 0.000569524620371093 0.0014928304895059 0.00280893081370635 0.000108423904013976 0.00129542672442723 0.000159616659133174 0.000393098961980773 8.46753863274119e-06 XM_005207193.1 C5H12orf5 PREDICTED: Bos taurus chromosome 5 open reading frame, human C12orf5 (C5H12orf5), transcript variant X1, mRNA. 0.0 2205 100.00 0.217880085653105 NM_020375.2 C12orf5 Homo sapiens chromosome 12 open reading frame 5 (C12orf5), mRNA. 0.0 764 78.15 0.168094218415418 TCONS_00196263_1 sp|Q1JQA7|TIGAR_BOVIN TIGAR_BOVIN Fructose-2,6-bisphosphatase TIGAR; 4e-140 396 100.00 0.994791666666667 1 coding 0 0 0 0 0.0695088888761094 0.522751592401914 -0.01892389275474 0.711797110966592 GCGTGCTGGAGGGAGAAATGCACAGAGAAGACTCTAGACACGTGTATAGAAGTCCTCATCAGTCTCTGGTGAACAGTTAGTCTGCACAGACCGTGCATGGGATTTTGGAGAAGAGCAAATTTTGCAAAGATATGACAGTAAAGTATGATTCAAGACTCCGAGAAAGGAAATATGGGGTTGCAGAAGGCAGGCCGCTGAGCGAGCTGAGGGCCATGGCCAAAGCGGCAGGGGAGGAGTGCCCAGCATTCACACCGCCTGGAGGAGAGACCTTGGACCAGCTGAAAAGGCGTGGGAAAGACTTTTTTGAATTTCTTTGTCAACTGATCCTGAAAGAAGCCGGTCAGAATGAACAGTTTTCCCAGGAAGCCCCGAGCAGCTGTCTGGAAAGTTCCCTGGCAGAGATATTTCCTTTAGGGAAGAACTGTGCCTCCACGTTTAACTCTGACAGCGGCACCCCGGGCCTAGCAGCCAGTGTCTTAGTCGTGAGTCATGGCGCCTACATACGAAGCCTGTTGGATTACTTTCTGACTGACCTCAAGTGCTCGTTCCCAGCGACTCTGAGCAGGTCCGAGCTCACGTCAGTCAGCCCTAACACAGGGATGACTGTCTTCATCCTAAACTTTGAGAAAGGAGGCAAAGGGAGACCAACTGCCCAGTGTGTGTGTGTGAACCTCCAGGGCCACCTGGCCGGGGTGAACAAAACTCCCTAAATCTGAATCATCTGCATGGAAATCAGCACATGTGAGCCTCTGAGGGAGTGCCTCTTGACTTTACTTCCGTCCTCTGCTAATGCAGATTTGGAAACAGTTAAAAAGCTGTCTGTTACAGCAGGTTATAAAACTCGAGTGGAATCAGAGCCATGTAAAACACTAATAGAAAACCATCGAAAATGGACTTCTTTGGTGCAAGTACAGTTGGAATTTTCCAGGGTAATTTTACCACCCTGCTCAGTGACCTCTCTGTATTGTAAATGGATGAGGGAACTCAGTATTGTGAATTGAGGCATGAATAACCCTGTTACTATGGTTTGGGGTTTTTTTTTGGTTTTTTTTTTCACCTTTTTAATATCTTTTTTTTTTTTTTAATGTTTTTCTTTTATGTCTGAAAAATCTAACTTGTTTTCTTGGTATGATACTGTATTTTTTTTTTTTTCTTTTGCTGTCTTCATCCAGTGCTTGGAAGAGGGTACTTGTAATTTCCACTCCATATTTATGTGACAGATGTTATATTCAAAAAGTCCTTAAAGGAAACCTGCTATCATAGTTTACGTAAAAGCAAATGACACTAAATCTTTACTATGGAAATCAACTGTTGTAACTGTGGATTCTGGAGGGTTTGAGATATAGATGAATGTGGCTTGTAGTTTCAGAACAGTATACTGAGGAAGAACCATCACCTATTACAGAATTTTCAAAGAGGGAATCAAAGCAGGAGAAACAAAAAGAGCAGACCTTTCATATCTAACCTGTGGGCTGAAGAATTTAGTTTGAACATGGTGCTTAAGAAAGCACACAGTTGCTGATTTGCTTCAAAGCAGTGGGGATTTGTTCAAGATGAGGTTTCCTCTCTTTTCCACCAGATGGTGCTAGAGAAAAGGGATTTGGGTTATCACCGACTTCATAGACCTGAGTTTGAGCAAGCTCAGGAAGTTGGTGATGGACAGGGAAGCCTGGCACGCTGCTGTCGTTGGGGTCGCAAAGAGTCAGACAGGACTGAGCAACGGAACTGAACTGAAATTCTGTGCAACAGATGGGGGTCCCTCTGAAGTCCTCGTCTCCATGGAGAAAGTGTTTTCCATGCAGTTTTGCTTATAAATAGTCATGTTGATGAATGCTGTGAGCCTCAGCTCACAAGAGGGTAAGACTGAGTCTGTCCGTCACTTAAGGCTAAAGTCACACTTAGACGTGCGTCACGTTTAGGATCACGCAGTCCTCAGTGTGTCCAGTGCCACCGGTGGCCTGGAACGGAGGATGTGGTCGCGCACAGGGAGCTCACTGCAGACAGCTGGCAAGTAATCAGAAAAGGACAAATAAATGCCCACTCCCCCACCCTCCAGAAGTAATAACTAACGCCCTCCTTTTTTAAATAATGCACTGAGATGGAAGTAAAGTTCCTCTAAGCAGCCGTCACTGCCCTGTTGCCTCCTGTTCTCCGCAGAGGCGGCCAGCACCACGGGTCTGCACTCCCACCCGTCCTTCACATGGCTGCCTGGTATCATCAGGGAACGCTATCATTCTGGCGTTTTACAAATGGACACAGCATCGGTCTCTTCTGACTTCTCACTTCCTGTGTGTATCTTGGGGCTCTATACTGGTGTGGACAGACCTGGCCACTTCTCTAACCACTGTATTCTGCAGAATAAGCACAGTACGTTTTATTTCTTTATTCTCCCATCAGTGGATGTTTTGGTGTATTCACCCTTTTCTGAATAGAAACAGTGCTTCAGGGAGTGGTCTTGTGCTGTGTCCGAGAAAGCGCGTATCCCCAGCCTGACAGGAGCCAGTATTCTACAGAACAGAGGTTTTTCAGTCTCACTGGAAGTATTTCAAAAGCTCCTGGTCTCCACATCTTTGGCAACACTGGATTTTGTCTGGTGAAATTGTTTTAATCTGACGAGTGAAGGCTATGCCCCTGTGTTAATGAGCTCTTCTGTGACTGCTGGAGTCTGGGCATTTGTGTGTGTGTGTGCATCTTGACCATGGGGTTCCCTCTCTGGCAAGTCATCAGTCCGCATGCATTCTTGGTCTGGCTTTCTGTTCGGCTGCGTAGCTTTTTTGTGGTGAGTTATAGGAGGCCTTGAAGATGTCCTCCAGTTCACTCATCTCTTGTGTATGCCACCATACACCTTTTTCATATGTGTGTCTTTTTTTATTTTGAAGTCAAACGGATATACGCTATTGTTGATGATTTGGGGGAGTTGGGGCTGTCTTTAAGAAGCTTTTCCTACCATGAGGTCATATCCTAATCTCCTTTTTCTTACAGTGTTAAGGAGTTTTCTGAATGTTTCCTCTCATCATCTGGAATTTGTTTTTGAATACTGTAAAGTCAGAATTCTGTTTTAGATATTTTTTCCCATGTGGTGAACGGTTACCAAGTCTTTCTTTTCCCAGTTGGTTCCTGATTCTCAGGCAGACCCCCACGCACCCACATGTGCTAGAGGGAGTGGACTTTGCTCCAGTTCAGGGAGCTCTGGGTTCCCATGCGGGCTTCCCGGGTGGTTCAGCTGTAAAGAATCCACCTGCGATGCAGGAGACTTGAGTTCAGTCCCTGGGTTGGCAAGATCCCCTGGCAAAGGAAATGGCAACCCAGTAAAGCACGCTAGTATACTTGCCTGGGAAATCCCACGGGCAGAGGAGCCTGGTGGGCTCCAGTCCGTGGGGTTGCAAACAGTCGGACATGACTTAGCCACTAAACAACAACTCTGTTCCCGTAGGACTGTCACTCTCAGTTACTGCAGCTTCATGGCCAGGTACTCTGTACAGGGAGCACCTCTATTCTGTACACGTGTTGGAATCAGTTCATTAATTTCCAGAAAAACTCTGTTGCAATTATAACTGGAATCGCATGCCTGTGTTCAATTAGTCATTCGGTAGATTTATTTTGAGCATGGCACATACATGCCAGGCTGTTACAAGAACTATTAGAGCTATTCTAAGAACTGTGAATATATAGCAATGAACAGAAAAATAGACCATCCTTGTGGAAGCCATACTCTGTCCAGGAAGATGAATACAGGACCTGTCAGTGGGCTCTTTGCAGTGGAGGGAAATGAAGCGGGAAGACCCGAGGGAGGCGTGCGGCTTTATTTGAGGGATGCCGGGAGGGTTCCCACAGGTGGGAGCAGAAGGTGGGATCCAAAGACTGAAACCAAGAGTGAACTCTGCTCGTCTGTGGGAGGAGACGAGCAACCCAGATGGAGATGGGGACACGGACGGAGGAGGAAGGGTCAAGCTCTGTGTGGGACCCAAGCTGGTGTGGGGGGAGCAGGTACTGGGAAGTCTGGGTGGGCGACAGGAGAAGGGAGCAGAAAGCAGAAGGGATGAGGGAGGGAGGCCTGGCTTAAGGGCTGGGGCTCATCTGTTGATGGGTTAATGTCTGATGGGACCAGGCGGCAACATGGGGAAGATCCGTGGTCAGTAGACTTGCGTTCAGCTTCTAGTAGTTTTGTGGCTGAGTGAGTCTCTTCGTGTCCCCGAGCTTCTATTTCCTTATATTAAGTGGAGAATAATTATAACAAAGTGTGTGTGTGTGTTGGTAACCTTTTGCTTTTGATATGTCATGCCCACAGAAAAGTGGCAAGAATAATACAAGAAACTCCTCATGTTAATCTCTTCACCCAGATTCACCACTTGCTTACATTTTGAGCCATTTGTTTTGTCCTGCAGGCTCATGGGTATGTTTTCCCCCTGAAACACTGGAGAGCAATCTGGAGATCCCATGCCCTTTCCCCTGCAAAATTTCAGTGTGTTGAAAGTGTTAGTCACTCAGTCGTGTCCGACTCTGCCACCGCATGGACTGTAGCCCACCAGGCTGCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGTCATTTCCTCTTCCAGGGGGTCTTCCCGACCCAGGGACCAAACCCAGGTCTCCCGTGTCTCCTGTACTGCAGGTGGATTCTTCCTGCAAATTCTTCCTGTAGCCATCCCCAAATCACAGTTTGGCTGTGATTACCTTTGTTGTTATTTTTCTTGAGATTTGATGAACTTCTTGTATCAGTACGTTCATTTTTCATCAGTTTTGGGGAAGTTTCAGTCATTATATCTTCAAATAATATTCCTCAACTTTTTCTGTACCTTTCCTGGAACTCCACTTACACATATTTTGGACAATTTGATACTGTCACACAAATCATTGAGACACCGGTCATGATTTTTTTTAACGTATTTATTCTTTCTTCAGATTAAGAGTATATGTTGACTTTATTATCTTCAATGGCTATTTATCTGCTTAATAAATTTATTATTTCAGATATTGTATCTTTCAATTCTTGATTTCTACTTGGTTCTTTATTCTTTTCTCTGATCTGTTTATTCCTTAGTACCATTCTTTCCTTTTAAATCCTTAAATATATTTATCATAACTGCTTCAAAGTTCCTGTCACTGATTCCAGGATCTGGCTCATCTAATGGCTGGTCTCTAGTGATTGCATTTTCTCTGGACTGTGGGCCATTTCCCCTTATTTTGTCCAGAGCCTGGAATGTGTCGTCTTCCTTCAGAGGGTTACTGGGATCTTGATGTTGTTGTGTCTGTGGGTATTTTTCAAATAGAAAATTTTCTTTCTTTGAAGGAAACAACAAGCTAGAGTGATCAGAAATATAATCACAATTAAAATTTTTTGTTTTCCAGAATTCTGTCTGAATTAGTCAAAATTACTGAGTTCGTTTGTGTATGGGGAAAACCCGGAATATTTTAAAGTTCTGATTTTTTTTCAACTTTGCTTTCTCTACATTTTCCCAGTGCTCCTCCACCATAATTCCTTTTATTCTCATGTTTTGATATATTTTTATGTACGCATACAAAAAAAGAAACACTCAGAGAAGCTGAGATAAATTTTATTTTTTTTA EMBV3_21390 CTATGGCTGATAACAAAAGTTGTGTATTACCACACAGCCCCTGTGTTGACATGCTGCATG Gene BVV0102_077634 + 0 NULL GK000029.2:22270179-22275084 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01258 GGCCCAGTCCATGTTACTTTGGCCCTTGATTTTCTTTCAGATTGGAGGTTCTCAAGAGGC Gene GeneID:788381|CENPB:XM_002692229:1472_cdna Constitutive 0 NULL GeneID:788381 13 GENE CENPB NULL centromere protein B, 80kDa EMBV3_20642 GATTTAAAATATCTCTTTGACCCACCCCACTTTTTCTTCTTTACTTGAAGTTCTAGTTTG Gene BVT0101_080769 - 1 EMBV3_28957 GK000009.2:14983764-15034320 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236665 1 XLOC_144544 Coding TCONS_00236665 XLOC_144544 NonCoding Coding - 9:15030765-15035429 - TSS177122 3966 3 TCONS_00236665_5 91 0.464195663136662 2 0.149903495603689 0 0 0 0 0 0 0 0 5.968323886089e-06 3.834840229442e-05 4.44547572104768e-06 1.31275077377069e-05 0 5.93040127475974e-07 0 0.000599466162561673 0.000121398486293516 0.00150561392790586 0 0 0 0.000187357971385933 0.000181625341524682 0.000477662218546405 1.34382172582545e-07 0 0 0.000100782407992437 3.21840819958215e-05 0.000161310420974138 XR_227695.1 LOC101908400 PREDICTED: Bos taurus uncharacterized LOC101908400 (LOC101908400), 0.0 1346 75.63 0.461926374180535 0 noncoding 0 0 0 0 -0.106028241539422 0.350594142060291 0.0219780169290835 0.639284267773922 TTTACAACCTTGAGATATTCTTTTGATTTACTGTAATAACCGATTGAAAGAGTGTATAGCTCCCTTGCCAATACTAGTGAGGGGGCCACTCTCCACCACCTTCTGATGTCTGCGTCAGAAGCTTTCTCTGTCACTTTTCATACTTTAATAAAACTCTGCTACACAGAAGCTCTTGTGTGATCAAGACTGGTCCATCATGAATTTGATACTGTTCACCGTAAGCTATTGTTAGCAGTGTTCCGACTCTCCGGATGGCCGAGCCCCGACTGGACTCATTGGAGGGATGGACCAACTCACCAGGAATGGCCACAGGATCAGGTGAGGACCCAGGGCCAGTCCCCAGTCAGGTCCTACCCCAATGGGTAGAAGTGGAGACTGATCACCTCCTTGGAGCTCCCAGGAAGGGAGCATCAGATAGGGAGAACTGGGGACTCAGGGGAAGGGAGGCATTGTGACTGATAACCTCCTTGAAGTTCCCTGGAAGGGAGCAACAGTTAAGGAAACCTGGGGACTTGGAAGAAGGGAGGCATTGTGATAGCCACTGAATGTGACTGTGTGATTTCTGATTGAACAGAGAGAGAAATTTTTCTTTTTATAAACTGCAAAACCAATTTTTGCATATGCAATTAAAAACAACTAGCTTTTAAAAGGCCTGCCTGGGGAAAAGCTGAAAGTCAACCCTTTCCATGCCCTTGAAATACACAGCCAACTTTGCCTGAGACGTCAGCCTTGGGCAAACTAGAACTTCAAGTAAAGAAAAAAAAGTGGGGTGGGTCAAAGAGATATTTTAAATCTCAAACAGAAAAATATAAGATCTCTGTCTGTCTGTATTTATGTATGTCTCAGCATATGTCTTTTGTTTTGTTTTCCGATAATATTGTTGAAATTGTAAATGAGTTCTAATTTAATTGACCTAAAGAAAAGTAAGCACTTACACATCAAATAATTCTAAATACAAGAAAAATAAGCCTAAATAATTTTCAGATTCACATGAACAGGGAAATATTCAATATTAAATATCTAGTATTAATGTTTGTTTGCTAATCTAAAGGAAGTAGGATGTATGTTTTTAATAAAGAAGATACAAAAAATAAAAATTACATTTTATAAAGGGAAAAGAAAGTAGGTCTGACTTACAGGTGGCCGTTACAGAAAGTGATTAAAAAGTTTGTGGAAAGCAGACCCTGAAAAAAAAAATTGTACATGGTTAGGACTAAGTTTAAAATAAATTTAATTAAGTTTACCTGAGTTTAAAGTAAGCTGGTGCAAAACTTGAATTCGGTCTTTCTCTTTGTTAAGAGGACATACCTTCTTCAGATGTTGAACTGCTTTTAATAATAGATTTAAGTTTCTTACCTCTTAATTGACGAGTTCTATATTTACCTTTGAAATCTTTTGTTACCTTGGACTAAGTAAATAACTATTATTTCACAGTGACTTATATGATCCTACCTGACTGAGTTGTTATAAACCCTTTTGATATTTATCGACAAAACGTCCTAAATAACTTGACTTCTAGCTAACTTTGGGATGCTTCAGAGGGCCCCTGAGACACCCCAAAGAGCTATTAAGCTACCTGGGTTCACTGGACTGTTAAATTACATGGGAAGTACTGTTAAAGTGGCGGGGAAAAATATCTTTTCAGGTTATACTGTATGGCTGATGTTACTAATATAGATATCCTGAAATTATGTGAAATTCATATAGATCTGATATGCCCTGATAAAATATGGTCAATTATAATTCTAATTATCATATTAAAGTGTTATGACCAGGTTTATTTGTCAATTGCAATAGAATCAGATTTTAAACATGCCTTCTATGGTTCTACTTTCATGCCTTTAGAAAAATACTGCTAGTTTTTCAAGATTTATGGAAAAAACTTTCTAAGATTAAGCAGATAAACAAATTTTGTTATTAACTGTAAGCTGGTACCAGACTGGAATTTGATCTTCTCTCTGTTTAGAGAACAAAGATTTCTTAAAATGCAGCTTTCAATAACAGATTATGAATTTCTTTGCCTTTAAGTGATTTATATTTGTTTTTAAAAATCTTTTTGTTACTTTGGTAAAGTCAATAAACATTATTTAAGATTATGGTACATGTAGACAAAGCTCATTCTGCTTCAAAAAAAAAAAAAACCCTCATGGTTAGACTTTTGGTATCCTGATGTCCTTAAAACATGGCTATAGTCTGTTCTTAAATTAGGAAATTAAAAATAAATAAACAACAGCTGAAAATCAAAGAGCTAGGGTTATGGGAAATCCAAGAGGGTTGCTTGGCTTTTCCTGGCTCCCTGACAGACCTCATTTTTATTTGATGGGTTAAAGCCTTACCTGGCTACTGTGTTAATGCCCTCACAATGAGTCCTCCAAAAAGAAAAAAAAAAAAAAAATTATGCTTCACTGAATATTAAGTGCTAGTTTTGTTAATTAAGGTCTATGTTTACTAAGACTCACTTCCGAGATAGTTCCTTGTTATGTTATGTTGCTAAAAGTTTTAATTAAGTTATTAGAAAGGACACTAAGATTGTTTCTAGAGCTTATCTCAATAACCAGTCTTTGGATAAAAGTCAGATGCTCCTTGATATACAACCAGGAGATTAACAGTTGGTTATAATCATTTAACTGAGTCAGATGACCTGGGGTATACCCGGCTGTACCCAATGAAAGTTCTTGACTTAAATTCTTGCTTGTAACCTTACTAATAACTGCTTGCTGTATTATTTTCTATGTAGCTTGTTTCAGAAGATTATTTCTTACGTTACCAAATGTGTGGCTGAGCCTGTGATAAAATGCTGATATGCAGTTCCATATGAGATCAATAATTGTAATAATGTAACTCTAGATATGGGAAGAAGCAAAAAGAGGAAATATTTTCCTGGCCCAAGAGGTTAGTAAGGTAGATATGGTCCAGAGACTTTTGCTACTTACAAGGGCTGGCCTACTGACAACGCATTGAGTGGCCTGTCAATGGAATCTTTGTTAGACTGGGAATGAGCCTTCCCAGCACTGTGGGACACAGTGACCATGAAATGCCCCCCAAACATGGTCAAATATGACTAAGAAGGGGCCCTGCTGACTGGAAGTTGGCCCTTGTCAGCTGCCTCTACAAAGATTAAATCATGACCACTGCAAGATGCTGACCTTCAACACCCCCTTGAAAGGAGTTCAGGGTGGAGACAAAAAATAAGGTACCCTGTGCTCTGGGAAAACCCAGAAAAACAGGCCTTCAGATAGTCAGATGTTTTCAGGTAAAGATTTTTATGAGTCCAAATTCTTGCATCTTCTCATACCTAGAGAAACACTAATATCGTGAATGAGTGTCTGGACTTGCTTCTCCTGGCTAGCCCCTCAGCAGCTTTCCTACATCTATTCATCTTTGGACCAAATATCTTTAACTTTCTTGTTGAGTTTGTTTCTCCAAGTAGTACTTCAAGAAGAATGTCCCCCAGCCAACACCCAGACAATGCTAGAACAAGCTGCCTTATCATTCTGTGTACTCTCATCTCCCTCCCCAAAGTCCCCAAATGCACCCCAAGGTCCTCAGGCTATTCTCCCTTTGAGATCTTACATGGTAGACCAACCCCAGTGATAAAAAAAAAAAGCTCAAGGGAGACCACCACCAACTAGCTGACCTGGAGATGTCCCGACACCTCCAGGCCCTGGGAAAGTCTTCTGCCATATTGCCCAAGAAAACTTAGAAAGGACATCCATTCCTTTGGGCAATTGGGTTCATGCCTTTCAGCCAGGAGCTGAGGTATGAGTTAAAAATTAGAAAAAAAAACAACACTTCAGCCAGTTTGGACAGGTCATCCTGGCAACCACTACTGCCGTTAAAGTTATAGGCGTCATCCCTCGGATCCACCACACCAGAATCAAGAAGGCAGCTACTTCCTGTGATGGGGACACCTGGAAAGCAGTTGGTGACACCTGGAAAGCAGTTCCAGACCCCAAAAACCTCCTC TCONS_00236666 TCONS_00236667 TCONS_00236668 TCONS_00236669 s 3' 7339 TCONS_00236666 TCONS_00236667 TCONS_00236668 TCONS_00236669 s 3' 6406 EMBV3_39624 CGCCGGAGTGAACACATCTTTTCTGTCACTGTGTTTGCGGGTGAAGTCCATGCTCTCTCT Gene BVT0102_138722 + 0 NULL GK000030.2:39518582-39552952 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244199 TCONS_00244200 TCONS_00244202 1 XLOC_150392 Coding TCONS_00244202 XLOC_150392 Coding Coding ZNF275 X:39505045-39523128 = TSS183582 6109 1 TCONS_00244202_5 376 0.175806187592077 3 0.662316115473952 0.000684543133866565 0.000460100792375705 0.000357826815686608 0.000333047402136123 0.000956943446571827 0.000181706219196372 0.000308769516508318 0.000176657211796845 0.000585071375662904 0.000298144389523937 3.59721248948534e-05 1.43386669549402e-10 4.70351831805894e-107 0.000181649719302015 0.000151994894616016 0.000648673519572813 1.35790156729917e-05 2.6947968471483e-05 0.000383981453984094 0.000643915840973975 0.00014311293048275 0.000193012329551045 8.55441825168336e-05 0.000148467611692657 0.000819981298208549 0.000904177726998728 0.000349109646876182 7.86018998871394e-05 4.52943604718e-05 0.000123016606272407 XM_005200625.1 ZNF275 PREDICTED: Bos taurus zinc finger protein 275 (ZNF275), transcript 0.0 4978 99.96 0.452283516123752 XM_005274644.1 ZNF275 PREDICTED: Homo sapiens zinc finger protein 275 (ZNF275), 0.0 2966 73.65 0.757079718448191 TCONS_00244202_5 sp|Q9NSD4|ZN275_HUMAN ZN275_HUMAN Zinc finger protein 275; 0.0 702 90.69 0.997340425531915 7 coding 0 0 0 0 -0.040744003373944 0.741430973126434 -0.00306757711796016 0.95672474520396 ATGTGCGGGGCCCGGGTGATCGTTTGGGCCCCGGGAGGATGTGCAGGGGGCGGCCCAGGAGAGTGTGCAGAACTGGGCAAGTCAGAGCCATCCCCTAACGTGGATTGAGCTAAACATTCAGAAAGCATCTGGGCAACCCAACAGCCAATGATGGATGAAAATGCACAGTCACAGGAGATGGCTTCCACAAGCTCCCCGAGGGCCAGTGAGCCCAGCCCTGAGGTCAAACAGAATGGGGACTCGGGGGGGAAGGGAGGAAGCCCCCAGAATTTGCCTGTAGAGCATCACTTTGCATGTAAAGAGTGTGGGGATACCTTTCGGCTTAAGGTCCTCCTGGTGCAGCACCAGCGAATTCACAGTGAGAAGAAGGGCTGGGAGTGCAGCGATTGCGGGCAGGTCTTTCATGGGGTGACTGAGTTAAATGAGCACAGGAAGAGCCATGTGGCTGCAGAGCCCCAGCCGGGCCCCAGCTGGGTTCTCGACGGGGCCGTGGAGAATAGGGAGCAAATGGAAAAGGAGGCAAAACCCTTCGAGTGTGAAGAATGCGGGAAAAGGTTCAAGAAGAATGCGGGCCTCAGTCAGCATCTGCGCGTCCACAGCCGAGAGAAGCCCTTTGACTGTGAGGAATGCGGCCGCTCCTTCAAGGTAAATACCCACCTCTTCCGCCATCAGAAGCTGCACACTTCAGAGAAGCCCTTCGCCTGTAAGACATGTAGCAGGGATTTCCTGGATCGCCAGGAACTTCTCAAGCACCAGCGGATACACACCGGCCACCTGCCCTTCGACTGCGACGACTGCGGCAAGTCCTTCCGAGGAGTCAATGGCCTGGCCGAGCACCAGCGCATCCACAGCGGAGCAAAGCCCTACGGTTGCCCCCACTGTGGCAAGCTCTTCCGGAGGAGCTCGGAGCTCACCAAGCATCGGCGGATCCACACTGGCGAGAAGCCGTACGAGTGTGGCCAGTGCGGCAAAGCCTTCAGGCAGAGCTCCAGCCTCCTAGAGCACCAGCGCATCCACACTGGGGAGCGGCCTTACGCCTGTGGCGACTGTGGCAAGGCCTTCCGGGGGCCTTCTGACCTGATCAAACACCGGCGCATCCATAGTGGACTGAAACCCTATGAATGCGACAAATGCGGGAAGGCCTTCCGCCGGAGCTCCGGCCTGAGTCGCCATCGGAGGACCCACAGTGGAACAAGACGCTGTGAGTGCAGCGAGTGTGGCCGCGTGTTCAAGAGGCGGTCGGCACTGCAGAAGCATCAGCCAACCCACCACGAGTAGGCGAGGCTCACAGCCCCACAGCTGGCAGCGGATTCCCGCTGGGGCCAGGTCCCTAGAGGGGGAGGGCAGAGTCAAAGGAGATGAACAGTTTTGTAATGCTTATATATTTTCTCTTCAGAAAGGTTGAAATCAATTTATACTACCACCAGCAATTTATAAAGTGTCTATGTTTCCCATTTTGCCTATCGAGAGTAGCTTTTACCATTTTGATTGATTTTGGCTGGTTCAACTGGCCTTGAGTACCTTCAAGGTATTTAAACCCACAGGTCTTGAATCGGAGAATGAGAGAAGAGAAATCTGGATGTGGGAAGTGGAGCTGGATGGAGATGCTTGTTTTCCTCCAAGCTCCCCCTTCAGGGAAAGGGAGACCCAGAGCTATTCAATGACAGCATCTGTAGATTGTGAATCCCGACTTTCCCTAACAGAGCAATCACCCCAAAGTTTTTGGCCTACTTGAATTTATAAATTTTTAGGGTTGTAAATAGAATAATCAAATGTCTTATAATATTTAATTTATTAATTTAGTTATGCATACCTATTATAAATCACATGTTATATATAATATATTAATTTAGAAAGTATTCCTTTTTTGCCTGACTCTGCTCCATGAGATCATTTTATTCTAATTCTTCCTATGCATTTCTAACCACACTATCTTCACCAACCTCAGAGCCCCTTTGGAGTCATTATTTTCAAAGCCCATCCAGTGGCTTCCATCTGTATGAGCTGTGTGCCACGTAGCACTGTGACAATCCCTGCACAAGGCTCTCACTAGAAATCACCTCCCACAAGCCATAAGTACCTGTTCACGTAACATTAGAATGATGGTTGTCCTTTTTTAATTTGTCCTATAGTTCTACAATGCACCCACTTAAGGTGTTCCTTTTTAAATGAACTTTAAAAGGCTTTTTTAAAGCATTAAAAACTTGTCATTGTGAGCTCATACTCTTAAGAAGAAGTACTGAATCTGAGTTACATTTCTTTTGTATCCTTTTTTCTTAAACCAATTCAACCTGGTGACTTCCATGCATATCCAAAACTAGCATCGACTGGAGTTTATTTCAGGCTAATGGGTCTCATCCTCAAGCAGGACTATTAAAATCAAGTATTTGAGAGAAGATCAACATGATAACAATGACATCCCAAGGACTTAAGCATAAGGTGATGCCTCCTTTTGGGGAACAATAGCCTCTCCTGATATGGGGCCTAGATGGTACTTCTCCAATCCTCCATTTCCACCTCTATAAAACGAGGATGATCACAGGACTACCTCTTAAGGTTATCGCAAGGACCGAGATGCCTCACCTGGCACAGAGGTACACACTCAGTGAAGTCATCTGCCATCACCTCCATGGTTATTGCTGTTGTTCTGTGACTCACTGGTATCTGAACTGGGGATAGACCCAGGGCTCCTGACTCCTAGTCTCATCTTCTTTCTCTCACATGATGGCTTAAAATACTGTTTCCGTTTGCTCGCATGCAGATCGTATGTGCATCTCCTTTGACCAGTTATCAAGTTATCTTTGAATATATTGACATTATACAGCAGTTCTTTCTATATCAATTGTGATGATTTCTTTGCCAGTTTTATTGCTTTGCTCTTTGTAGCAGTTTTATTACATTTTTGTTTTGCAAGCTTTTGATTTTTACATATCCAAGCGTTCATTGTTGTCAGTTAAATTGTAACTTCCATTGCTTCAGTAGTTAGAGATGATAATATTCTCTTCTAGATATTGAATTACAAATGAAAAGTTGAAAGTCCTGCCCCACCAGAAGGTGGATGTCCAGGTGGGCAGGCTGGATGGAAATGGGCCAGAGATGCAGGCTCACTCCTCATCCAAGATGAAGACTCTGCACATATGTGGGCAGTACTTGACTATCCAACCTGGCCACCCAGGCACTCAAGAGGAATTTCCATCTTGGATTGGCCAGAACACTCTTGACTGTTCCTCAGCATAGCCCTGGCCTCAGCAGTGGGGCGGGACCTCACTTATGGGTCAGGATCAATGGGACGGTCCAAACTTGGTCTTGGCAGCAGCTGGCCAAACTTCCAGCTCCTGGGAGCCTTGGCCATGGCTCGGCGTGGATTCAGTGCCTGAGCAGCAGATCCACCCAACAGACATCTCAAACACGAAGACTCAACCGACTGATGGCTGTCACGTGGATGGTATCCTCTTCCTAGAGAGTGATTCTGGAACTAGAAAGAGGTCAGCAGTTTGGTGGCTTCCACTTTTGATGACTAGGAGGAAATTCACCTGTCTGTTCTGATGTCACCTCCTGCGTCCACATCTGTGAGGGGGTGACAGAACAAAGGCTTGGAGACAACCCTGCCCCTCTGATGGCTACACCAGGCCCGGGCTGTGACTTGCCACAGCCTTGCCCAAGAGGGGCAGTTAAAACAAGGGTTCAGAGGGCAATGATGCCCTTTTGACGACAGCCCATGTGGCATAGAAATAGAAATTGGTCATCCTGGAACTGGGCTCTCACTTTCAGCAGCCTCCCCCAGGAGGAACAGCAGCAAGGGCTAGCCAAGAACCTGGCCCCTGTAGCGTGACTTCTCAGCAGCTGTGCCTGGGGTAGAGGGGGAGCTTGAGAGCCTGCCAAGGAAGGGCACTCTTCTGACAGGCCCACCGGGGCTGGGAAGCAGGGTCCCACAGTGACCCTTGTGACCTTAGCCAGAGGTACTCTGGAATGGCTCCCCCAGGTCACACCAGTGGCTCTCTGCAACATCTCCATCCTGACCCCCGGGGCTGGAGAAAAGCTGACACCTCTTGTTACATAGCGATTCTTTCTGCTAGGGGGCCTCAGTTCTTGCAGTAGGTGTAAATCTATGTCTGAAATCACTACTTCCTGTCTCATCAGTTTTCTCTTTTCAAGCTATTAATGACGTATTTGCTGCAACTGTCATTTGGTAACGAATGTTGGCATCCATAGGGGCAAGTCTGGCATTGCAACCTGAAAGTAGCCTGCCATGTCTTGCCTGGGTTTTAGGAAGGATCTAGATGCAGTATTAACTCAGAACTTAGTATCGTCGACACCACTCCACTTGTCCCCAGCCAGGACCTGGCACCTTGGCACCTTGGCACCTTGTCATGCCCTCCTTTCCTTTGTTCCATTCTCAGTTCTATGATTTTCTCTTGAACAGACTGTCCGCCGGAGTGAACACATCTTTTCTGTCACTGTGTTTGCGGGTGAAGTCCATGCTCTCTCTGTGGCTTTAACGTGTGTCCTGTAGTCGCACCGAGTTCAGTGTTTGCCTCGGGTCCCTGGGGGAGGGGGTGGATTTCCTTGGACTCTCTAGGTCTACTGCTACATCAGATGCAAAATGTGATCAGACTTGCTGTCGTGTGTGCTTGTCTATGCATTTATGTATCTACCTCATTTCATTTTTCTTTCTAATCACATGTATTCCTTTTGCAAGGCAAATGGAGAGCAGGTTGATTATGTAGAATGCCAGCTGTCCTTCAAAATGGGTCCTTTTCTTATATTCTGAAAAAAAAAACCTTCCATCACTTTTATTAAAGTTTTGAATACTTGCTGAAATTTTCAGAAGAAAGTAACTGTTTACCACTTCTGCTGCTTAATAAGATGAACTGTGTGGATTAGTTGTGTCATACCCACTCTCCAGTTTCCAAAATGAGCCCCACTCTGTCCTGGTGGGCATCTCTGTCATGTGGGGTTGCATTCCGCATTCCCGGGGCTGTGCCCTGTTGTCTGTTATGTGACCTCCACCCCGTCAAGGTCATGTTCATTCAACCAGAACTGAACACTTGACTCACAGGCAGTAATTGGTCGACAGAGCTGGAGACATGGACCAGATCTTTAGGGTTCTCTGTGAAGTATAAATAAGAAAACAGAGAAGTTTCTAGTTTGTGCTGGAAGGAAGAGGGAGCCACCTGGGATTTAGGGGAGTTGCCCTGATGGGCAGCACCAGCTTGAAGATCTATGGACTCCTGCTGGGCACCCTCAGAGAGGCCTTGACCCCAGCACTGCAAGGGAGCCTGGCAGTTCCCTTCTGGGATCTCTGGCGACTGCCCTGGTCCACTTGTGTCCCTGCCGTAGACCCCCTTGACCTGAGCCAGCTTGAGTAGGCCTCTGCTTTTTACAGTCTGTCAAGAGCAATTGCATTTCCCCATTTGTCCACTTCCTGAGAAGAATCACATGGTTGGCTTTCCTCATGTCCTACCCAGGCCTTGTCCCCAGACCAAGCCCCACCTGACTGTTCTAAACACCTCTTTTCAATGTGGTATTCTGTTTGCTAACATGGATACAAATCTATGCCTCCCAGTCTCAGTGAGTTTGACCAATGATTTTTCTGTCTGGGCATTGTTCTTTCCTGACCCCATGTTTACCCCAGGAAATGAGTTAAGTCACTACTCACCCTATTCTTGATTTTGGAAGTGTCTAGTTACTTCCAGCTACTTTCCAACTGTCATATTGGGAAACTGATAACTTCTGGATAACTAATATACTTACAATGTGTAGTTCTCATTGCATCTGTTCGGGTGGTTATTTTCTAAAGTAGAAATGGTCTCTTTAAACAAACATGGCCTTCAGTGTTACTTGCAGATCTGAGAACCGTTATGCCCTGCCCCAGTTCATGTTTTGGTTGTTGGCTCTTTTTTCTCATTCTTCCCCAGTCTCCTTAACTTGTCTGTTTTACAGCAGTTACTATAATCAGCCTTGCACTAGCGCTTTGCTCTCCCCGCCCTCCCCAACCCGTTAGATTGTGAGCTCTTAGAAGACAGGGGTGGCCCTTCTTGTCTGATTCCCCTTCCAGATCTAGCACAGTGCCTTGCATTGAGTAGATTTCAATAAATATATGTTAAAT EMBV3_38824 CACCACGACGGCGTACTTTGACTGTATTAGGATCTGTTGGTGGTGTTTCCGTAAGCACTG Gene BVT0102_067555 + 0 NULL GK000005.2:116335304-116344434 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26163 CTGGTGGTTAATTCCACCCCATCAGCTCTTACTAAGGTCAGTTCCATCTGTTTCCCGTGC Gene BVT0101_067079 + 0 NULL GK000008.2:22954855-22966102 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06570 CGGATGTGTTACCAAGGTTATGGTTACCCTCTGATGCTGTTTCTGGAAGAAGGAGGCGTG Gene GeneID:518502|RAD1:XM_002696383:110_cdna Constitutive 0 NULL GeneID:518502 20 GENE RAD1 NULL RAD1 homolog (S. pombe) EMBV3_16250 GCGTCACGTTATGCAGTCAAGATACTTGCCATCTGCACAAACAGTTATCAGGAAGCGCGA Gene GeneID:515758|TTC12:XM_002692992:159_cdna Constitutive 0 NULL GeneID:515758 15 GENE TTC12 NULL tetratricopeptide repeat domain 12 EMBV3_36246 GCACTGCTTATCGGCGGTGTTTTCATCACTTTGTCCTCTGATCATCTACCCTTCGCCCTG Gene GeneID:100297238|LOC100297238:XM_002690961:333_cdna Constitutive 0 NULL GeneID:100297238 10 GENE LOC100297238 NULL hypothetical protein LOC100297238 EMBV3_04288 CAGCAGCCTGTGCTTTGCTCACGCACTTCTGCAGCCCTCACCCAGACCCTTCCTCCGGGC Gene BVV0102_327542 + 0 NULL GK000020.2:66752919-66937443 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10203 AGACATTTTCCCTCATTATGTCCCTGTGCTAGTGGGCTGGTCAAACCTGCGTGTGTCCCA Gene BVT0101_034642 - 1 EMBV3_43766 GK000015.2:18265150-18282664 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35849 GCGCGGCCAGGAGCGAGGATGCAGTGTCTGGCTTTTGGTTTTCAGTTCCACTGTTGTTAA Variant GeneID:534910|CD200:NM_001034620:98_cdna 114^789 2 EMBV3_38425 GeneID:534910 1 GENE CD200 MGC128080 CD200 molecule EMBV3_19968 TTCCCTACAGTATACCCCTCCCTTCAGTATCAGTCAAGAGAAAAGTACTGGAGCCCCTGG Gene BVT0102_119650 + 0 NULL GK000022.2:50586505-50592323 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127144 TCONS_00127142 1 XLOC_077581 Coding TCONS_00127142 XLOC_077581 Coding Coding LOC100848754 22:50587234-50590999 j TSS95164 2250 2 TCONS_00127142_4 121 3 0.403028692879915 0.00176743908527561 0.000527145912377313 0.00179358926684379 0.000989821472846502 0.000941681232789243 2.64825632623994e-05 0.000404329408113718 1.28386062944355e-07 0.000381206303277432 0.000500803387999211 0.000299170389162505 0.000244734078335801 8.92651664788557e-05 0.000326141783401305 3.6993290150197e-05 0.00285219712432058 0.0238371929441378 0.00388704255597526 0.000425955434204179 0.000135711124586931 0.000191586766538252 0.00149733272093469 0.00181686285259121 0.00116969543540257 0.000236985392080095 0.000184641562214628 0.000244779803342477 0.000699369768617042 0.00141698682673076 7.2579656893067e-05 XM_003583814.2 TUSC2 PREDICTED: Bos taurus tumor suppressor candidate 2 (TUSC2), mRNA. 0.0 2434 100.00 0.599111111111111 NM_007275.1 TUSC2 Homo sapiens tumor suppressor candidate 2 (TUSC2), mRNA. 0.0 1281 80.17 0.598666666666667 0 coding 0 0 0 0 -0.353434055875109 0.158350804611655 -0.00885677366976007 0.903012154632016 GCGGCTGTTGGTCCCGCCCCGCGGACCGACGAGAGAAGCAGCCAATCAGAGGGGGCAGCATGCGGCGCATTCGGAAGCGGAAGTGAGGTTTCCGTGGAGACAGCGGAGCCTGCGGAAGGCGGCGGCAGCGGCTGCGGCGGCATCTGCGAGCCAAGGCCCAGGCAGGCTCCATGTTCTATGACGAGGATGGGGATCTGGCTCACGAATTCTATGAGGAGACAATCGTCACCAAGAACGGGCAGAAGCGGGCCAAGCTGAGGCGGGTGCATAAGAACCTGATTCCTCAGGGCACCGTGAAGTTGGATCCCCCCCGCATCCACGTGGATTTCCCCGTGATCCTCTATGAGGTGTGAGCCTGGGGGGTGGCAGGCGTAAACACCCCCTGCCCCAGCGAGACACCCCCAGGCTCAAGGTGTGGCTTCCATTGAGGAACCTAGGCTGGGGCCACAACCGTGAATAAACTCCACTGGCCTGGAACCTTCAGCTGTGAGCAGGGCAGTCCTACAGTGCTGGTTGGGTGTTGGTTTGTATGTGGACCAGAGATGGCTGGAAGCTGGTGAGGGCTGATGGCGGAGTTACCAGTCCACCTTTCCCAGCAATCCCTACAAGGAGCATGGCAGGGCACATGCTGGTCAGGAATGCCTGGTTCCTGTGCCCTTGCCTGGCCTGCATTCTTCCAAGCTTGCCTAGGGCCCAGCCCTGCTAGAGGCTACAGCACTTTAAAAGCAAGGTCTGCCTTTTTCCAGCCCCAGGGCAATGGGAGCTCTACAAAAGTGGGAACTTCCTTTCCCTCACTTCCTTTACCCTCTCGTTGGAGCATTTCAGCCGTTTGCTACCTCGATTCCTCCTGTGTTGGACAGAGGCTGGGGGCAGAACAAGCCTGATTTTTCCTGCCTACCTGCCTGTTTGTTCCCAGCCCCAGATGGATGGACACTTTGCTGGCTGTTAATAGGAGTAGGGACTGGTGTGGGAGGTTTCTCCCTCTACCCAGGGCTGGCCCGATCCCTCCCCACTGCAACTAGTTGTTTCTCCCCCTCCCCCCCACCCCAAGTTGAGAGGGTGTGGGATGGGGATCAGGAAGGGCTCTGGATGCCTGTGCCCCATCCCACTTACTGTATCTAATCCCCCTTGCCCTTACACATCCACCACCCTGTGGTAAGGCACAGCACCCTAGGGCTGGTGCCAGTAGCTCTGAGGAGCCCACCACCCCTTTTCCCTACAGTATACCCCTCCCTTCAGTATCAGTCAAGAGAAAAGTACTGGAGCCCCTGGATAGGGGCAGAAAGAAAACAACCATAATAGGAATACTTAAAATGTGAAAGCTTGTAAATAGTCTAGTCCATGATGTTATTGGGGCAGAGTCTGATTTCTACATAGAAATGATTTTTTTTTTAATTCCTTACTGTGCAAACTCTGTGCTTTAAGCGTGTGAGAAATGGCTTGGGGAGGGTAGTCCTCAATCTAGGAAGGCTGTTGTGTTATTTGTTCAATAAAATTATTTGTAGACCCTGCATACAAGACTGACATCCTCTGAGGCTGTGACACCCAGTGTCTGGACTACCACATGGGCATAGAAGGTAGACCTGGGTCCAGGACTCAGGTCGCACCAATGTTTGGCAAGGTCCAGAGTGCGGCCATCCCAGCTACAACCAGCAGGTGGCAGTGTATTCACACAGACCTCACTACAGACCCACTCAGGATGGAGAGCCACTCCTGTATTAGGTTCAGTAAGTGGAGACCCTGGAATTGGAAGGCCCTGGGATACTTCAGTAGGGATTGGCCCCACCTGCCTGACCTGAGATGACAGTGTGGCCTCAGATAGGTCTGGAACAGTTGTTCTGTTCCCAGCTGAGGCAGCTGAACCTACATGAGGTCACAGCCTAAGCCCCATAGACCTTCGAGGGCCCAGCCTTAGGTGGACAGCAGCCAGGTGGGTGCCACTGCCCTTGACCTCCTCCAAAACTGCAGCCCAAATCCACTTGCCTCTCCTGGTGGGCACTACCAGGAGTGTAGACTTGGGGCTTCTGTTCCAGCAGGTTAAACTCAATTCACCCAGTACTTCCTCTCATCCTTTCTGCTCTTGCCTTCTCACCTGCCGCCTGCCCCCGCGAACATTTGGCCTGCACTTCTCAGGTCGGGCTGTGAGGCCAGTTCTATGCCAGGCCTAGCCTTGGCCATCAGCCCAACTCCCTGTAAGGGAAAAGAGAGTTCAGGGACGCAGGCTGCTGGGTCTGAGAGGTTGACCTACCT EMBV3_27032 GGACAGGTGGTTCTAAAAGCCATGATCCAGACCTGGAGTCAAGATGTAAGACATTTCTGC Variant GeneID:538504|ZNF565:NM_001102216:700_cdna 208^430 1 EMBV3_30297 GeneID:538504 18 GENE ZNF565 MGC152155 zinc finger protein 565 EMBV3_11698 TCCTACTGGAGAAGGGAGCCCGGTGCCAAGGAGAGGCCCTGCCTCTGGCGCTGGCCCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06953 TGGCACCCCATCCTGCTCGGGACTATGTCGTTTTGAGAACATGGAGGACTAATTTACCCA Gene GeneID:511433|DLC1:NM_001102493:7_cdna Constitutive 0 NULL GeneID:511433 27 GENE DLC1 MGC152430 deleted in liver cancer 1 EMBV3_03598 TCTGAGCCCCGAACATCAGAAACTGCAGAGAAAGGAAGCTAAGAAGCCATCAGGCAGACT Gene GeneID:281192|GHRL:NM_174067:68_cdna Constitutive 0 NULL GeneID:281192 22 GENE GHRL NULL ghrelin/obestatin prepropeptide EMBV3_26512 TGTGGCTGCGGTGTCCTGTGTCTTCCTTGCCTTTGTCATCGTCCTACTGGCTCTCAGATT Gene GeneID:100337150|LOC100337150:XM_002689259:172_cdna Constitutive 0 NULL GeneID:100337150 7 GENE LOC100337150 NULL protocadherin gamma subfamily A, 6-like EMBV3_32751 GAAGGTTTGTGGCACTACTTTTCCAACAGTATTTGCTCACTTGTGTCCCTATTTGGTAAG Gene BVT0102_111123 + 1 EMBV3_34370 GK000009.2:78073398-78159327 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33489 ACAGCGCCTCTCTTTGCAGGTAAACATCCGAAACCGAAAACGTTCCCGCAAGGACATCCA Gene GeneID:513558|BSCL2:NM_001015589:79_cdna Constitutive 0 NULL GeneID:513558 29 GENE BSCL2 MGC128416 Berardinelli-Seip congenital lipodystrophy 2 (seipin) EMBV3_09903 ACTAAACCAGGAGCGGCCGACTTGGACCTTCATGGTCGTTCTGGGGTTGGAGTTTTCCCC Variant GeneID:100316905|LOC100316905:XM_002689764:24_cdna 211^381 9 EMBV3_02070 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_41697 TGAGTCAGAGGTGCAGCCAGCGCCCATGTGAGTCAGAGGTGCAGCCAGCACCCCGTGAGT Gene GeneID:100300980|LOC100300980:XM_002696462:81_cdna Constitutive 0 NULL GeneID:100300980 20 GENE LOC100300980 NULL hypothetical protein LOC100300980 EMBV3_38161 ATTCCGGCGGCTGCCGCGACTCCGGTGCAAGGTGAGGACAGCATGAACATCCCTAAGTGT Variant GeneID:533538|SGMS1:XM_002698368:152_cdna 249^398 4 EMBV3_31373 GeneID:533538 26 GENE SGMS1 NULL sphingomyelin synthase 1 EMBV3_09053 GAGGAAGGAATTGAAGTATGTGCGTAGACTTTGGAGTCAGACCTAGATACAGAGACTGAC Gene BVT0102_380123 + 0 NULL GK000007.2:102236126-102456174 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214766 TCONS_00214764 1 XLOC_130762 Coding TCONS_00214766 XLOC_130762 Coding Coding FAM174A 7:102235568-102251253 j TSS160554 2742 3 TCONS_00214766_1 45 0.0521517140773158 3 0.825363427697016 2.11497621373101e-19 1.25269978887432e-09 1.6813277172173e-09 1.9202775720793e-48 3.78120219555976e-47 1.31139467305606e-12 1.49426750552966e-22 3.19577059410923e-230 7.35189902157012e-06 7.91547770400744e-05 2.73160037104055e-06 6.40468508605274e-06 1.17803715672485e-15 8.51958581745811e-15 3.70013101750778e-56 0.00020831074730893 3.70285425686878e-06 0.00125847734091709 4.80164374856078e-09 1.65601177136978e-10 6.36778930565099e-53 0.000272275185016274 0.00028453350007938 0.000166702496627988 7.09371960658553e-119 9.7783244348218e-22 2.07023632188083e-09 5.20521688013731e-05 7.40201775486974e-05 4.8029490527692e-09 NM_001206184.2 FAM174A Bos taurus family with sequence similarity 174, member A (FAM174A), 0.0 1251 100.00 0.25237053245806 NM_198507.1 FAM174A Homo sapiens family with sequence similarity 174, member A (FAM174A), mRNA. 1e-151 542 76.47 0.2527352297593 TCONS_00214766_1 sp|Q8TBP5|F174A_HUMAN F174A_HUMAN Membrane protein FAM174A; 2e-19 78.2 97.14 0.755555555555556 1 noncoding ACTGAACTGATGCATACAGTTTCTTAGCGGGGCTGAAAGTTAAGAAGTAAGAAGGCCTACAAGAGACGAGAGAACGGCTGGAATAGAAGGCCTCAGTAAAACTATTGGACCAGAACAAAGACTTAAGAGATTATCTGTCTACATTATCAGCTGACAGAGAAGAAAGTGTGTCAGTCAGAAGAAATGGTGATGGCACACAGACATACAGGAGATGAGAAGAAGGAACCGAAAGACTAGGAGATACGGGGTTTTGGACACTAACATAGAAAACATGGAATTGACCCCTTTAGAGCAAGATGATGAGGAGGATGATAACACATTGTTTGATGCCAATCATCCTCGAAGATAAGAATGTGCCTTTTGATAAGAAAACTCCGTCTTCTACAATGAAGAGTAGAATGTCTATGTTTAAGGAATAAAAAGCCACTTTATCAATTGGGGGGTATTTAAGTTACATATATTATGATAACCTTCAATTTGTTGTTGCAATAAATGTGTATCATTTGTTAGTTTTTCTCTGTATAGAAGTGCTCTTAATGGGCTCAGAGTTGCTGGGAGTAAATTGTACTATAATAGAGATCTGAAAATTACTTTAAAGCAGTGTGTTTTCTGATCAATTTCTCTTTCTTATTTACCTTATTATTGTAAACTGTTTATGTACTAATCAGTTCATTTTATTTATGTATGTGTGTGTATATATATAATTTATTTTTTGGCTGGTTAAGGGTTGTTTTTTTTTCCTTGGAACTATAAATCCCAACAACCAACTGGTGTGTAACTTTATCAAGATGTATTTCCCGTTTTTGTGGGGAAAAGAAGCCAAATTTATTATCTTGAGTTTGAGTTTTTTAAATATAAAAGTGTCTGTGTTGTGTGTAAAACAATAAATACTATTTAAAATTCTTTGAATGTGGTATAAACAAGATGTGTTTATATAGTAAACCCAAAGCTATAGATTTATAGATTAGCATATGTATTTTATATGATTTCTTTAAAAATCTGTCAAAAGTTATTGTATTTTAACAACTTCCTTGTTAAATTATGATACCACGTTGATTAGATATTTCAGAAACCAGTGAATTTCAAAGCCATTTAATTTGTTTACAGTATTGTGAGAGAAGTACCAATGAAAACGTTCCTATCACGTTATATCATAGAAGAGGAAGGAATTGAAGTATGTGCATAGACTTTGGAGTCAGACCTAGATACAGAGACTGACCTCATTATCTTCTGAACATGTAAATAACCCTACTGAGCTTCAGTTTTTCACATTCTAAGAACTAGAGGAGAACTGACAGGAAAAGTATGGGTCACGGACTCCTTTTCCTAGAGGGGCCGTGAAGGTAATTTAAATCTGTGTGTCAGGACAGGCTGGTTGATAGAGTAGTAACAGATGGTCCCCAGATCACGGTGGGTTACAGCAGAGATTTCTCTCTCACTCACACTGCCCGTTTGTTATGGACAGTGATTCTGCTCTTCAGTGTTTTCTCCAGGGCCGAGCTGATGAAGAAACCTCAGCTTGGAATATTGCCTCGTAGCTAAATGTCCAGATGCGGTGAACTGCATGCTAGTTGATAAGCATCTGCCCTGAAGTTGTATATTTCATTTCCATCTACATTTTATTCCAAAACAAACCCTGAAGCCTCTGTAGAGTTCAGCAAGGCAAGGACAGGTAATCCTCTAGCAATGAGGTAACTTGGAGTATTTGACCACTTAAAATGCCAAGTTAGTTTCTCCTATATGCTAACGGGCTTACCACAGTGAGCCAAGTCCCCCTGATGTCAGTATATTCTGTATATTATGTAAACAGAGACTAAAGAGAAAATATATTTCCTGTTCTGAAGGGATCAGCCTTTGTTCAGCTCCCACTAATAGTTATTATCAGGAACTATTTACACAGTGTTGATAAATACTTTAGTTTTATTTTCCGAAAGAAACCAAGCCTCCAGATTTCTTATATGAAGCTTCATCATTTAAAAATGTTATTAAAACCAGATCATACCTAACATTTTGTGATATTTGAAAATCATTTACTGTAGTGTCTTAGAAATAGTGTTAATTCATTTAATACTTGTTATTTATAAACTGATTTTTGCATTAAAACTAAATGGAAGTAAGAATCAAATCTATCAGAAAATAAGAAAACTAGCCATTAAGATAAAGCAATGATAATCATTATACATGATCTCTAAGTTGGCATTAAAGGGGATGTTACCAAATGTTTTAATATGTGGCAGCAACTTTATTAGAAATACACAGTTTCTCAAGGTTACTACTTTGAAAAGGATATCTTTTATCTGAGTATGAAATTCTGACATGTTTGTTAAAAATGCTCGTATTTCATTCCTTTCATATAGTCATTCTTATATTGCAAATCTACTATTTTAAGCATCATAATAAGTTACTTTGATTCAAGTGCCAGATAATACACCAAATTTTATTTAGCACACAATGTACATAAATTTTCATTAGATGTGTAGCAATCATGGTGATAATATGGTTAAGATTTTCACCTACAAAACTAAATGCACACTGTAAGTAGCTGGTGTTTGAAAACATGTTAGCTATTCTCCTGTCCCTTTTGTACTTCCTTTGGCTGTCTTATTAGAAAGAGCCTGACCTAAGAATTAGAGATCAGTGGAAACTGGTGTAATTGCATTCATAGCTCAGGAGGGAAGTAAGTGGAGAAAAAGAACAGGTTTGGAGTAGCTTACAGATGTTCCACCCTTGATCTGGAAGCCT EMBV3_03332 CTTTTTGGATCTACATGGCCTGGATTCTGCCCTCACAGACTCCCACATCTGTGACTTCCT Gene GeneID:100300885|LOC100300885:XM_002700340:91_cdna Constitutive 0 NULL GeneID:100300885 X GENE LOC100300885 NULL similar to ferritin, light polypeptide EMBV3_10889 AATGGCCAGCTTTACTGTTACTGACCGTGCTTCCCATTCTCTTGTCGTGGTAGGAAAAGG Gene GeneID:782816|TRIM44:NM_001105014:75_cdna Constitutive 0 NULL GeneID:782816 15 GENE TRIM44 DIPB MGC165959 tripartite motif-containing 44 EMBV3_21654 AGGGCTGGGATAGACTTCAAGGTTTTTGTTCTACCAGATGTTTTACTAGAAATCAGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03299 TCATCCTGGATGAAGCCACTAGTGCCCTGGACGTGGAGTGTGAGCAGGCTCTGCAGGACT Gene GeneID:618733|TAP2:NM_001046622:167_cdna Constitutive 0 NULL GeneID:618733 23 GENE TAP2 NULL transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) EMBV3_18145 GAGTCCACGGGCCCCTACCCACCTGTTCCAGCCCCAGCACTCCGTCACACACTCTCATCT Gene BVT0102_443788 - 1 EMBV3_39701 GK000011.2:2140974-2221055 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14622 GTACAGGGTGACTGTAAGGGCCAAGCAGGAGAGGCGTAATCCTTGTATAAAATAGGAGCC Gene GeneID:535403|MYST4:XM_002698885:16_cdna UTR3_Alt 2 NULL GeneID:535403 28 GENE MYST4 NULL MYST histone acetyltransferase (monocytic leukemia) 4 EMBV3_38067 AGATCGTGCCTCAGCCGCCGAAGGAGTCAGGAGCTCAATATAACGACGCCCGCTGCTGCC Variant GeneID:404546|HSD11B1L:NM_206969:21_cdna 791^953 2 EMBV3_35931 GeneID:404546 7 GENE HSD11B1L 11-beta-HSD3 MGC157172 hydroxysteroid (11-beta) dehydrogenase 1-like EMBV3_06553 TTTCATGCTAATGATTACCTCTTGCTCTTTCTACATGCAAAAAAATTTGTATTCAAATAA Gene GeneID:510574|VPS26A:NM_001075455:299_cdna Constitutive 2 NULL GeneID:510574 28 GENE VPS26A MGC139062 vacuolar protein sorting 26 homolog A (S. pombe) EMBV3_11854 ATGAAGTTCAGCTGTCTGTCCTTCCGACAGCCTTCCGCGGGTTTCATCTTAAACAGTGTC Gene GeneID:617197|LOC617197:XM_002699633:11_cdna Constitutive 0 NULL GeneID:617197 X GENE LOC617197 NULL similar to chromosome X open reading frame 40 EMBV3_34462 TGAACCTGGCTAAGTCATCAGGAGAGGGAAAACCAGAGATGGTTCATCACATGAGCAGCC Gene BVT0101_071575 + 0 NULL GK000024.2:58053919-58095641 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42974 CGGGTATCCTGAAAGTATGCAGGGTCACAGCGGCTGACTGGGATGTGTAAAATGTCAAAG Gene GeneID:785293|IPP:XM_002686420:380_cdna UTR3_Alt 2 NULL GeneID:785293 3 GENE IPP NULL intracisternal A particle-promoted polypeptide EMBV3_02866 TTTCTCCATGCTTTTATCGCTGAAGTGTTTGCAATGGTGCGTGCACACGTGGCTGCGCTG Gene GeneID:520387|LOC520387:NM_001102503:34_cdna UTR3_Alt 2 NULL GeneID:520387 5 GENE LOC520387 MGC142988 KIAA0528-like EMBV3_12674 GAGGGCCGGCCCCCTATTGGGGTGAAGTTTGAGATCCCCTATTTCACTGTCTCTGGGATC Gene GeneID:515766|AP1M2:NM_001034511:41_cdna Constitutive 1 NULL GeneID:515766 7 GENE AP1M2 MGC127475 adaptor-related protein complex 1, mu 2 subunit EMBV3_21339 TTAGACACTTTCAAGCACCCGAGCGCCGAGGGAGACCTCACCGCATACATTTCAGTTAGA Variant GeneID:782848|KIAA1429:XM_002692817:148_cdna 81^196 3 EMBV3_10813 GeneID:782848 14 GENE KIAA1429 NULL hypothetical protein LOC782848 EMBV3_26523 CATGCTTGATGACCTGGAACTAGAATCCACCTACAACCCCTTGGAAGTCTGGAGCCACCT Gene GeneID:541185|LOC541185:XM_002691197:128_cdna Constitutive 0 NULL GeneID:541185 11 GENE LOC541185 NULL similar to Chromosome 2 open reading frame 65 EMBV3_16049 ATTTGAAACTGTGGGCAGGTGAGGCCATCATTCTACTGTATCCTCTGAGTCACAACATCC Gene BVT0102_033521 + 1 EMBV3_20675 GK000004.2:38856749-39116166 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181358 TCONS_00181360 TCONS_00181366 TCONS_00181362 TCONS_00181368 TCONS_00181359 TCONS_00181367 1 XLOC_110584 Coding TCONS_00181362 XLOC_110584 Coding Coding CACNA2D1 4:38338929-38860701 j TSS135756 7326 1 TCONS_00181362_6 646 38 0.986032186533939 4.20240639242468e-76 2.20275546512276e-155 5.97693119910714e-08 1.23520150467437e-08 8.48500746809174e-06 2.37790456773296e-107 1.03060627122273e-38 1.34738359407048e-06 2.77637595495998e-05 2.57116251744325e-08 3.74653124791601e-66 8.60663687871085e-126 5.98452240419435e-77 1.56456255320115e-68 3.18488143441554e-09 0.000785308685221325 0.000275838989799275 0.000379164286232789 6.87159691924947e-07 1.04755112134771e-05 3.01486575696962e-12 9.87115406794408e-05 6.07849770950032e-05 0.000388730847683977 7.28549427491392e-06 1.27450039938168e-05 9.62329009042917e-07 2.38404926046454e-10 1.59019419330255e-28 9.17930958600985e-09 XM_005205313.1 CACNA2D1 PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 2/delta subunit 1 (CACNA2D1), transcript variant X1, mRNA. 0.0 1.313e+04 99.50 0.999453999453999 XM_005250574.1 CACNA2D1 PREDICTED: Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 1 (CACNA2D1), transcript variant X6, mRNA. 0.0 8832 87.15 0.983892983892984 TCONS_00181362_6 sp|P54289|CA2D1_HUMAN CA2D1_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-1; 0.0 1303 93.73 0.998452012383901 2 coding 0 0 0 0 -0.81493927558845 0.0117624029901584 -0.00574204716233692 0.903317766411432 GCCACAGCCTCGGCCGCGCCAGCCCGCAGACGCCTGTAGTCCGGGCGGACCTTGCTCCTTCTCCTCCCGCGGTTTCCAGCACCGGTCCTTCCCCCGGCTCCGGAGGGAAGCCAGATTGATCTTCGATCGCGAAGATGGCTGCTGGCTGCCTGCTGGCCTTGACTCTGACACTTTTCCAATCTTTGTTGATCGGCCCCTCGTCGGAGGAGCCGTTCCCTTCGGCCGTCACTATCAAGTCATGGGTGGATAAGATGCAAGAAGACCTTGTCACCCTGGCAAAAACAGCAAGTGGAGTCAATCAGCTTGTCGATATTTATGAGAAATACCAAGATTTGTATACTGTGGAGCCAAATAATGCACGTCAGCTGGTGGAAATTGCAGCCAGGGATATTGAAAAACTTCTGAGCAACAGATCCAAAGCCCTGGTGCGTCTAGCTTTGGAAGCAGAGAAAGTTCAAGCAGCCCACCAGTGGAGAGAGGATTTCGCAAGCAATGAAGTTGTGTACTACAATGCAAAGGATGATCTTGATCCAGAAAAGAATGATAGTGAACCAGGCAGCCAGAGGATAAAACCTGTTTTTATCGATGATGCTAATTTTGGGCGACAAATATCCTATCAGCACGCAGCCGTTCATATTCCCACTGACATCTATGAGGGCTCAACAATTGTATTAAATGAACTCAACTGGACAAGTGCCTTAGATGAAGTTTTCAAGAAAAATCGAGAAGAAGATCCTTCATTATTGTGGCAGGTGTTTGGCAGTGCCACAGGCCTGGCCCGATATTATCCAGCTTCTCCATGGGTTGATAACAGTAGAACTCCAAACAAAATTGACCTTTATGATGTACGCAGGAGACCATGGTACATCCAAGGAGCTGCATCTCCTAAAGACATGCTTATTCTGGTTGATGTGAGTGGGAGTGTTAGTGGTTTGACACTTAAACTGATCCGAACATCTGTCTCCGAAATGTTGGAAACCCTCTCAGATGACGATTTTGTGAATGTAGCTTCATTTAACAGCAATGCCCAGGATGTAAGCTGTTTTCAGCACCTTGTCCAAGCAAATGTGAGAAATAAGAAAGTGCTGAAAGATGCAGTGAATAATATCACAGCAAAAGGAATCACAGATTATAAGAAGGGATTTAGTTTTGCTTTTGAACAGCTGCTTAATTATAATGTGTCTAGAGCCAACTGCAATAAGATTATCATGTTGTTCACGGATGGAGGAGAAGAGAGAGCTCAGGAGATATTTACCAAATACAACAAAGACAAAAAGGTCCGTGTATTCACATTTTCAGTTGGTCAACATAATTATGACATATAAATCTATTGTGTATATATGTGTATATTTCAGGTTATTATTACGAAATTCCTTCCATTGGAGCAATAAGAATCAATACTCAGGAATATTTGGATGTTCTGGGAAGACCAATGGTTTTAGCTGGAGACAAAGCTAAGCAAGTCCAGTGGACAAACGTATACCTGGATGCACTGGAACTGGGACTTGTCATTACTGGAACTCTTCCGGTCTTCAACATAACCGGCCAAAATGAAAATAAGACAAACTTAAAGAATCAGCTGATTCTTGGTGTGATGGGAGTTGATGTGTCCTTGGAAGATATTAAAAGACTAACACCACGTTTTACATTGTGCCCCAATGGCTATTATTTTGCAATTGATCCTAATGGTTATGTTTTATTACATCCAAATCTTCAGCCAAAGGAGCCAGTAACTTTGGATTTCCTTGATGCAGAATTAGAGAACGATATTAAAGTGGAGATTCGAAATAAAATGATAGATGGAGAAAGCGGAGAAAAAACATTCAGGACTCTGGTTAAATCTCAAGATGAGAGATATATTGACAAAGGAAACAGGACATATACATGGACTCCTGTCAATGGCACAGATTACAGTTTGGCCTTGGTATTACCAACCTACAGTTTTTACTATATAAAAGCCAAAATAGAAGAGACAATAACTCAGGCCAGATATTCAGAAACTCTGAAACCGGATAATTTTGAAGAGTCTGGCTATACGTTCATAGCACCAAGAGATTACTGCAATGACCTTAAAATATCAGATAATAACACCGAATTTCTTTTAAATTTTAATGAGTTTATTGATAGAAAAACTCCAAACAACCCATCATGCAACACAGACTTGATTAATAGAGTCTTGCTGGATGCAGGCTTTACAAATGAACTTGTCCAAAATTACTGGAGTAAGCAGAAAAACATCAAGGGAGTGAAAGCACGATTTGTTGTGACTGATGGTGGGATTACCAGAGTTTATCCGAAAGAGGCTGGAGAAAATTGGCAAGAAAACCCAGAAACATATGAGGACAGCTTCTATAAAAGAAGTCTAGATAACGATAACTATGTTTTCACTGCTCCCTACTTTAACAAAAGTGGACCTGGTGCTTATGAATCAGGCATTATGGTAAGCAAAGCTGTAGAAATTTACATCCAAGGAAAACTTCTTAAACCTGCAGTTGTTGGAATTAAAATTGATCTAAATTCCTGGATAGAGAATTTCACCAAAACATCAATCAGGGATCCGTGTGCGGGTCCAGTTTGTGACTGTAAAAGAAACAGTGATGTAATGGACTGTGTTATTCTAGATGATGGTGGGTTCCTTTTGATGGCAAATCATGATGATTATACTAACCAGATTGGAAGATTTTTTGGAGAGATTGATCCAAGTTTGATGAGACACCTGGTTAATATATCAGTTTATGCTTATAACAAGTCTTATGATTATCAGTCGGTGTGTGAGCCAGGAGCTGCACCAAAACAAGGAGCAGGGCATCGCTCAGCATACGTGCCATCAATAGCCGACGTATTACACATTGGCTGGTGGGCCACTGCTGCTGCCTGGTCTATTCTACAGCAGTTTCTCTTGAGTTTGACCTTTCCACGACTTCTTGAGGCAGTTGAGATGGAAGATGATGACTTTACGGCCTCTCTGTCAAAGCAGAGTTGCATTACTGAACAAACTCAGTATTTTTTCGATAATGACAGTAAATCATTTAGTGGTGTATTAGATTGTGGAAACTGTTCCAGAATCTTCCATGTAGAAAAACTTATGAACACCAACTTAATATTCATAATGGTTGAGAGCAAAGGAACTTGTCCCTGTGACACACGGTTGCTCATACAAGCAGAGCAGACTTCTGATGGTCCAGATCCTTGTGATATGGTGAAGCAACCCAGATACCGAAAAGGGCCTGATGTCTGCTTTGATAACAATGCTTTGGAGGACTATACCGACTGTGGTGGTGTCTCTGGATTAAACCCCTCCCTGTGGTCCATCATCGGCATCCAGTGTGTGCTACTTTGGCTCTTATCTGGCAGCAGACACCACCAGTTATGACCTTCTCAAACCAAATCTGCAGATTCAACTCCAGACCCTGCTGAAACAGGAGCCCTCAACTGCATTAAAATAGGGTCAACTGCGAACTCAGCAGACCACTAGCTGGGCCCACCCCATGGCATCCATCTAAGACGCAGACTCATAAGGCACCCACTGGCTGCATGTCAGGGTGTCAGATCCTTCAACTTGTGTGAATGCTGCATCATCTATGTATAACATCGAAGCAGAATTCTATACATGCTCTATTGGAAATTTTGAAAACTTGTTGTTGCATTGTTGGTGATTACATGTTAAAGGGCTCCCCACACAGTTGTTTATGGATCGTGCAAATTGTCTTGATTTTGACTTGCTGCAATCCTTGTTCTTTTACCAAGAAAATCTCTTGGGGAAAAGAGTTGTTTTTTTTTTCCTTCACTTACTCTTCTGTTAAAAATTATTTCCTGCTTTGAGTAGTTATTATTGGAAATATATAGAGAGACACAGAGGGAGAAAGAATTAACATTGGTATAATCTGACAAAATAGAAATAATGGCTTATTTTCTACAAAAAAAAAAATGCCATGAATAAAATGCCTTATGAAGAATGGCTTCTTTGCCAGAAATATAACACAAATGATGGCCAAGTTTTGGTGGGTATAATGGATTGATTGTTTGAAAATAATAACTAAGAAATTAAAGGTGCTTGAGGGTAGAATTAATATGCGACATATGTCCTCATATATGTGAGCCCTTAATAAATGCTTTGATGTAATGTCCTTTTTGTTCACAGTAAAGTTCCGTAGTGCTAGCCAGAAACTTCAAAATGCTCTAAGAAAAGCTTGTTGGGGGGAGGGGAAATGTTTTTTCTTGTGATAAATGAACTTTGGTTACCAAGGGTATTTTGCATGATGCTGCTGCTATTTTAACTTCGGTTTGTTTCTCTCTTACTGTAGAGTATAGTCCATTGAAAAGTTAACTGAGTGACATTATTGTTATGTAAGAATCTGAACCTTGCAGTGTAATGCACTTAAGTCATCTTTTAAAATGTCTTTAAACTACTCTGAATATACTGTGCAATGTAAATGCTGAATGATTGGATTAGGTAAATGGTGAAATGGGAATTAATGGATTTTATACAGATTCGTGCTTTTGCCTGAAAACCTATGTACAGATATTTTAAGTACATAAATCAGATTTGACACATTTATTTTTTGAAGAGTACATATATGTTCTCAGTGAAGAGACATCCTAGGTTTCCTCTCTGTTCGCTGGAATAGTAGCACGTACAATCCCAAACTCGCTGCTGCTTTTGTTGCCTCCGTTTTAAATGATACGAGCACTTGACCAAAATTTCCACACAGTTTGATGAGGGTTTTACAATACTCTGAACAAATAGGAAACCTTGAATCTCTATGTATGCACATGAATACTTGATTGTGAATAATCAAAATTGTTTTTATACAACCTCATTAGTGAAAATGGTTAGTGTATTAAATCAGATATTTCATTATAGAGTAATATGGTAGAATTTATTTATGCTTTAAAAGATTATTTTCAGGGTTAAACAGTATTTGAAGAAAGGATAAAAACAATGAATGTGTAACAATTATAGGGAATAATTCTGCTGAAGGCTGGAAGTATGCAGATATTTGCTCTTTTTTCAAACATGCCAGAAACTGGTATGTGTCTATGCTGGAAATTTTCTTATATATCATTTTTAAGTAAAAATCTTATTAACATTATCCAGTATGCTTTAATATGCTTCATATATCAAAGATATAACCAATTCTTTAGCATAGTTTAAAAGATATATTTGTTTTGTTTTTAGCTTTGCACACATTTGTAATTCCCTTCACCACTAATATACCCTAGGCACCACTTGTGTACATTTCCTTATTTAAAATATTTTTTTATTTAAAAACGGGGCTAGGGGGAAATGGAATCACTTTGCCAACTATCGTTCTAAGAGTTGACATCAGTTACCATTTCTAATACATTGTTGTGGTTTTGTAGTCTCATTTGTAACTGGTATTGACATTTTAGAAAACACCAAAGTGATTTAAAAAAATATGGAACTTCTCACTCTAGTAACAATATGTTTAAATCATGTTGTTTGTTAATTAAATATTTAAAACTTATTGTTAACTTTTGCTAGACTATTTTAAATCATGAAAGTGTTGAGAAGGGGATATCGAAATATAGTTATGTTAGCTTGTGTACATAAACGACGCACATTAAAACAAGCAAATTGCTTCCAGCATACAACAGACTACCTTAAAATTATCTTTAAAATCTATTAAATATATTTTCATGGCTAATGTCACTGAAGTGTGTTTTCATCAACTACATGTTGTGTTCATCACAGTGAAACTTGGCATCTCCTGGCAGAGTCCTATTTGATTTCATTTGCCATCAAAATATATTTATGTATATGAGTCTTGCCATGATCCTTTATTTTCTGTTATAAATTAAACATATATTATGACAGCCACATATATGTTAATAAATTGGGTAAGAACATGCTCTCTGACTAAAAATTGTTCTCATACCTAATACTAGTCTTCATGCATTTTGAAAGACCGTAACACTCATCCCATCCAATTATTATGTTTACTTTAGGATTTTTCTGAGTTTTGATTGTTGAACAATAACTTAAATCACAGCCTGTTATAATATTAATTTTCAAAGACTTAATAGTACAAGAGATCAAGAAAAAAGCTTTTGAACTCCTTTTGCTTACCTAATGTTTTGCTGTGCTCACGCAGCTGTGTAGTTTTCACTAAAACAAAACCAAAATAAGTCTTGTATTGGAGTTGAATAACAGAAATGGATTTTGCATTAATGATTTGTTTATATTTTCTTCATTTGAACAACCAGCATTACTGCCAAACACCAATCGTGGTCCATATTTGTAACAGGTTTTTAACATGACATAGTTAGCAAGTTTGACTGAAGAGATTTTTAGGTCCTGGGTCTAATAAGATTTTAGTATGATCTTTTTTCATGTTTCTAATGCTTGAGGCATTATTGCTTAACTTGGAAAAATCTAGACAGTGTTGCTGCCATTTGTAAGTTTTCCTATACTATTCCTTTTATTAACTTTAAAACTGGCCTTACTGGGTTCAAATAGGCAGTATCCCTTTTAAGTGACCTTTGCAACTCAAGTGTTACTTGCTTATTTGATGCTCTTTTGTATTTTACATCTCATTTAAATCTTTCTCTCCACCAAAGCTTAAATTCTATGTCTTAATTTAAACTCTGAACTATTCCATTAATCATGTTAGTTGACATTAAAGTGTCTAGAGGTACAGAGGCTGACCTAGGGAAACAAAATGGATGTTGTGACTCAGAGGATACAGTAGAATGATGGTCTCACCTGCCCACAGTTTCAAATATGTTACAATTATCTGGAGCCGGGACCTGTGTTGTTTTCCCATAGCACAGAATGTTAATACTGCTATTATTCCATGTACATTTCTGTAAAGAACAAATCAATAAAGCAAAGGTATGAAGTTTCTTGATTTCTTGAAAAAGTTCCAGGATGTTAAAGTCTTAGAAAACCTTTACCAACAGTTTCATCTACTTTATTTCTAATTCACAAGATTAACTCAAAGAAATTCTGAGACTAATGGGATACTGTCTTGAAAAGATGCCAATTAAGTCTACAGTGTGACCTGACAGAGCTGTCTTTTTTGTTGTGCTGTATGTTGTTGGATCATTTCTATTAGGGATACTTTTATTGAAATGCTCAGTGTGCATCCATGAAAAAGGCCAAGTGGCTTTGTGAACAAAAGATACTTTCTCCCCTTTATTATGTTCTCTTGACACTTTTGTGGAAATTAGCCTGATAAAAACATTTTTGTAAAAATTTGTATATTACTGTTATAAAAATATTTATAATCCCAGAAAATGTTGTGTTAAATCTTGTGCAAAAACAGTATATTCAGAATAAAAGTTTATCATTTAAAGTCACCA EMBV3_02916 TCTGTCCCGGTCGTCAGTGATGTGCGAGAGCTGCTGGAAGACCCCCTCCCTGCACCCAGA Variant GeneID:515362|EMG1:XM_002687861:96_cdna 722^951 6 EMBV3_11002 GeneID:515362 5 GENE EMG1 MGC138092 EMG1 nucleolar protein homolog (S. cerevisiae) EMBV3_18322 GGTGATGGGTGTCTTGAGAAGCAAAATGTGATCTTCCTTTTGGTAATAATACGGGTGCTG Gene GeneID:768076|MGC137894:NM_001077132:333_cdna Constitutive 1 NULL GeneID:768076 21 GENE MGC137894 NULL hypothetical protein MGC137894 EMBV3_29507 TCTCCTGGGCTGTGGCGTTCCTACTTCACCACCCCGAGCATCTTCAGCTACGACATCCTT Gene GeneID:282425|CYP21A2:NM_174639:48_cdna Constitutive 0 NULL GeneID:282425 23 GENE CYP21A2 NULL cytochrome P450, family 21, subfamily A, polypeptide 2 EMBV3_35913 GTCCTCCAGCTCCATTGGTTCTAACTCAACCTACCTTACATCCAAGTCTAAATCCAGCTC Gene GeneID:534326|GPR126:XM_002690290:14_cdna Constitutive 0 NULL GeneID:534326 9 GENE GPR126 NULL G protein-coupled receptor 126 EMBV3_43108 GAAGGCGAACTTCTGCTCGCGCCTGTTTGTCTGGTGGCTAAACCCCTTGTTTAAAATTGG Gene GeneID:100336463|LOC100336463:XM_002683735:2_cdna Constitutive 0 NULL GeneID:100336463 12 GENE LOC100336463 NULL ABCC4 protein-like EMBV3_27835 TCGTATCAAGGCTGAATGACGGCTTTCCAAAGTTGCCCAAGTCCAAATCCCCAGCATCTG Gene BVV0102_298472 + 0 NULL GK000024.2:10467132-11082482 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138537 TCONS_00138541 1 XLOC_084666 Coding TCONS_00138537 XLOC_084666 NonCoding Coding - 24:10740476-11030465 - TSS103783 868 1 TCONS_00138537_2 59 0.387096774193548 3 0.997017117949708 3.4700352470651e-10 1.50809660932154e-81 0.000100844429451441 6.14437208481738e-90 1.30154399607776e-07 0.000114973659054838 0.000591234913100265 1.23576127860718e-78 9.92099189227253e-05 0 0 0 2.78365715020395e-146 0.000232771241082125 5.66152064085715e-09 0 0 0 0.000737936235416785 0.000241007605654149 0.000552712348506468 0 0 0 0.00026708320210765 0.000871824609997112 1.71294945865452e-29 0 5.43545709499242e-11 0 XM_005205460.1 THAP5 PREDICTED: Bos taurus THAP domain containing 5 (THAP5), transcript 6e-16 89.7 96.43 0.0622119815668203 0 noncoding 0 0 0 0 GTGGAACCAATGCAACCCCTGAGTCTACAAGAGAAAGAGGGCTGTTGGAGAGCAGAGAGAAGGGTCATGATGGAAGTGGAGTTTGCCCTGCCATGGCCATTGGCTTTTGAAGGTGAAGAAGATGTTCTTTAGTAAAGAATGCAGACAGTTTCTAGCAACGTGGGAAAGCAAGTAAATGGTTTCTAGAAACCAGGGAAAGCAAGTAAACAGTTTCTACCCTGGGACTTCCGTGAGTGAAGCTATTCCCACCAACACTATGGTTTCACCACGAGACCTGTTTGGACTTCTGGTTCCTATAACTGTCATTTGTACTTGGAATACAGAACAAAATCCTTGTTGCTTCATGGGAGAATGACTGTGTAAGAGTGAACCACAAAAGGTCACCCACATTCTTCTGCACGTGGCCCTCCATCTTCAAAGCCAACAAGGACCGGGGATGTGAGACTTCATCACAAGATATCATCCTGACACTGCCACCCTCTTCCACATCCAAGGACCACTGTGATTATATGGGGCTTGTTAGTATCATAGAGAATAGTCTCCTTATGTTAAGATCAGCTCTTGAGCCACGTTAATTCCTCTTTGTCATGGAACCTAACACCTCCACAGATGCTGGGGATTTGGACTTGGGCAACTTTGGAAAGCCGTCATTCAGCCTTGATACGAATGTTAGAACATTTTCTGATAATGAAATTTTCTTATCGCCATGAATAAGATATTCACCTGTAATAAAAACATGTATTCAGAGAAAAAACATTAAAAAAATTTATGTTAAAAATCTATCACAATTTAGTACCTTGTTTATGAGCATCTGGAGAAGGCAATGGTACCCCATTCCAGTACTTTGCCTGGAAAATCCCATGGACAG TCONS_00139773 r 3' 28438 TCONS_00138533 s 3' 273346 EMBV3_29748 TACAGCAAGAAGCACTTTCGGATCTTCAGACGGTGCCTGTGGTGAGGTGAAGCTAGCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11502 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29139 CACAGAGAAAGGCGAGATGTGGGGAGGAGGACCACTTTGAATCCCCAGAGTATTTCTGGA Gene GeneID:527953|ZPLD1:XM_002684729:2_cdna Constitutive 0 NULL GeneID:527953 1 GENE ZPLD1 NULL zona pellucida-like domain containing 1 EMBV3_08704 CGACCTTTTGGAGAAAGAGAAACCACCTGTGTTTGTGGAGATTGACCTGGGAGACCTTGC Gene GeneID:767974|MGC134473:NM_001077039:75_cdna Constitutive 0 NULL GeneID:767974 12 GENE MGC134473 NULL hypothetical protein MGC134473 EMBV3_08701 CCTCCGCCCTGCCAGGGGCCCCACAGAAACCAATAACGTTTTGCCACTTGAAACAATAAA Gene GeneID:783548|TNKS1BP1:XM_002693713:413_cdna Constitutive 0 NULL GeneID:783548 15 GENE TNKS1BP1 NULL tankyrase 1 binding protein 1, 182kDa EMBV3_36518 ATACGAGGTGGCGCTGGAGGCGGAGGAGGACTCGGCGCACCCTCGGGAGCAGAAGCTGGA Variant GeneID:508933|CCL27:XM_002689812:126_cdna 145^204 1 EMBV3_36690 GeneID:508933 8 GENE CCL27 NULL chemokine (C-C motif) ligand 27 EMBV3_07930 GTCGCTCCAGCTCCATCAAACTCTCTCTTCTTACAAAGATCACTGCCCAGGAGCATCTTC Gene GeneID:287026|PLCB1:NM_174817:5_cdna Constitutive 0 NULL GeneID:287026 13 GENE PLCB1 NULL phospholipase C, beta 1 (phosphoinositide-specific) EMBV3_07885 GCAGCAGTCGCAACTTTACCCCATTGCCATCTTCATCAAGCCCAAGTCCATTGAAGCGCT Gene GeneID:509882|MPP3:XM_002700026:113_cdna UTR3_Alt 2 NULL GeneID:509882 X GENE MPP3 MPP3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) EMBV3_39576 CCTGATGTGCTTTTGGTATCTAACCAGTGCCAACATCCCCAGTGAAGCCATAAGTGGAGC Gene GeneID:510566|C2H2orf47:NM_001083406:88_cdna Constitutive 0 NULL GeneID:510566 2 GENE C2H2orf47 C2orf47 MGC148896 chromosome 2 open reading frame 47 ortholog EMBV3_15458 TAAAACGCAGTGGCTCCTTTAGCAAACTCCGGGCTTCAATTAGACGCAGCAGTGAGAAGC Gene GeneID:508999|KLC1:NM_001098915:193_cdna Constitutive 0 NULL GeneID:508999 21 GENE KLC1 MGC138907 kinesin light chain 1 EMBV3_43642 TCACCAAGTATCAGCGCGACGTCGACTTCCTCATCATCTACATCGAGGAAGCTCACCCTT Gene GeneID:494549|DIO3:NM_001010993:154_cdna Constitutive 0 NULL GeneID:494549 21 GENE DIO3 NULL deiodinase, iodothyronine, type III EMBV3_23232 ATAACCTTAACCTGCACTCCTCTGAGGCAGAACGGCACAGGAGATGGAAGGGGTTGAGGA Gene GeneID:613607|ZBTB4:XM_002695788:306_cdna UTR3_Alt 2 NULL GeneID:613607 19 GENE ZBTB4 NULL zinc finger and BTB domain containing 4 EMBV3_19556 AAGATTATCGGCTTTGGCTCTGCGCTCCTGGAGGAAGTCGACCCTAATCCTGCGAACTTT Gene GeneID:515216|AP2A2:NM_001075702:281_cdna Constitutive 1 NULL GeneID:515216 29 GENE AP2A2 NULL adaptor-related protein complex 2, alpha 2 subunit EMBV3_10341 GTTCTACCTTTGCTGTAAGAAAATCAGCAACCCTTCAGGCCATGTGAAGAACTGGGGCCC Gene BVV0102_251501 - 1 EMBV3_19395 GK000027.2:35943921-36108536 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155542 1 XLOC_094761 NonCoding TCONS_00155542 XLOC_094761 NonCoding NonCoding LOC100848706 27:35978162-35986883 = TSS116361 1634 4 TCONS_00155542_6 75 0.147490820073439 2 0.812844036697248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.36396081539179e-06 0 0 0 0.00010093716022262 0 1.85785194805524e-06 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0273982989063843 0.813230682074188 0.00378199034245931 0.93493884329267 CAGACGGATGACAGTTGCCAGTTGAGTCTCAGCTGGAGGTCCGTTGGTTAAGGACCGGAACAACTTCATGTGGCTTCTCCATACGGCTTCTCATAGCATGCTGGCTGGGCCACAAGAAGGGATGTCCCAAGAAGGAGTGTCCCGAGAAGCAACTATTCTACGAGACCCAGATGGAGAAGCTGCAAAGTGCTCATGACCTTGCCATAAAAGTCCTTGAAAGTCACTTCCGCCATATCCTACTGTTCGGGTATGATTCTGATTGCTGCAAGACTTCTTCCCCAAAATCAGTTCTACCTTTGCTGTAAGAAAATCAGCAACCCTTCAGGCCATGTGAAGAACTGGGGCCCAGCCCTGAAAGGCATTCTGAAAGCAGAGGATTTCCAGGGAAGCCAAAGGCAAGGCACGATCAGGATACCTTGACAAGCATCCTCTGTGAGCATCCCGTGTATGAGGCTCCAGCGCCAAGGCCAGTGCCAAACCGCAGGGCTGAAGGAGGCAGGCGGGAGATCACAGCACAGCCGCCAACACGCAGATATAGGGTCTGGAGTTGGGGAGGCAGGCGAGGCCAGCCTGTTTCCCTGGGCTCTGGGTCAGCCTTGCCAGGGCTCTCACCTTCCCCCCTTCCCGACCCCCCACCTCTCTGTGGACCGACTCCCCAAACTCCCCAAACACTGACACCAGTGTTTAACCTCTCCCCTCCCCGACCTCCACTGTCTGCTCGGGGAGATAATGGCGACACGGTTGCCCTCTCTCCCAGGCTCTCCCCAGAGGAGAGGGGCCAGAAAGAGCCCCAAGCTGAGTGGGCATCGGGCCGGGCTGTGTCTAATCCCATCTCGGGCCCTGCACAGTTTAGAGGCATCTCCCAAGGAGGCCCAGCCAGTTCTGTCTCTCTGAAACATAATCTTCTCGATTGTTTCATCTTGCTTTTAGATAGCCACAATTTTTCCTTACAACAGCCAGCCAATCCCCTCCCCAGCCCCCAAGCCTGGAAAAGAAAAAAAATATGAATGTACTTGAACGGAGTGATAACCACCCACTGCAGAAAATGCAGGAACAAGACCTAGCCTGTGGGGGGAAAAAAAGGCTTCTACCCAGAAGGAAAATGAAGGGGGCACCCAGAGGAAATAGGTCAAGCTTTGAATCCATGGGTCACGGTCCCTCTGGTGATCCATGTATTTCAGAGACGCTGGGGGACCGGGGGACCTCCAGCCTGAATGCCACGTTTGCTTAGGTGGTCGAGGTTTTGAATTTTTTCTCAGACTCTATCCTATCTAGCCTGGTCTGGCTGTAATCACAAATCTCCAAAAATGGCGATGTGTACCATTTCTCTTGGGTGACTCCATAGAATAAATATTTTACATACAATTTACCCAGAAGCCCCAAAAAGACTTGTTGAAAACAGCCCAAATGCAAATTGACCACCCTTCTGAGAAACAGTGAATTAAAGCTTCTTGGGCTGTGAAGCCAAGTTGCTTAAAAAGCCACAGTGCAAATTCTTAAAGCACACAGCTTCCCTGAACTCAGTATGGAGAAACCGATTTAAACTATTTTTACCCATTCATTGCTGACGCTAATGAAATTTTATGACTTGCTTTATAATTAATTATCTGCTTGTTATTAAAATTCTAACTCAA EMBV3_14703 GGGAAGGTACCATTGGCCAAGGGTTTTTTGTTTTTAATTTTCTTTTTAAACAAGCCAGCC Gene GeneID:352960|TRIB2:NM_178317:45_cdna Constitutive 2 NULL GeneID:352960 11 GENE TRIB2 TRB-2 TRB2 tribbles homolog 2 (Drosophila) EMBV3_24956 GGAATTGACCGGGAACGCTACATGGAACCTGTCACCCCCGAGGAAATCTTCACGTTCATT Gene GeneID:514742|SRPX2:NM_001014926:8_cdna Constitutive 0 NULL GeneID:514742 X GENE SRPX2 NULL sushi-repeat-containing protein, X-linked 2 EMBV3_02823 TGCAGTCAAGCGAGAGTGGCAGCCCGCACCACAGCCCTTCCGAAAGCTACCTGGGCAGCA Gene GeneID:616111|GPR124:XM_002698716:147_cdna Constitutive 0 NULL GeneID:616111 27 GENE GPR124 NULL G protein-coupled receptor 124 EMBV3_27649 AGACCCTCCGCCGGACACGACTCGGGGAGAAACGTGTTTTAAAATCCAAGCTCTCGAGCT Gene BVT0102_416972 - 1 EMBV3_30543 GK000001.2:85934783-85974118 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34544 TCCATTGGCTTGTGAAGTCGAGGGCAGATGGATTCTTGCTGGGGTGTTGTCCTGGGAAAA Gene GeneID:540798|PRSS45:NM_001082455:143_cdna Constitutive 0 NULL GeneID:540798 22 GENE PRSS45 MGC148351 TESSP5 protease, serine, 45 EMBV3_43752 TCACCTTCTACAGCCTGGAACCCAAGACCCAACCCCTGCACACCTTCCATGCCATCTTCA Gene GeneID:618637|TRIM65:XM_002696207:252_cdna Constitutive 0 NULL GeneID:618637 19 GENE TRIM65 NULL tripartite motif-containing 65 EMBV3_33034 GACCTGACCATAACTACACCAAGGAGAAGGTCAAGATTGTCGAGGGCATCTGCCTCCTGT Gene GeneID:504317|LRP4:NM_001077843:30_cdna Constitutive 0 NULL GeneID:504317 15 GENE LRP4 MEGF7 low density lipoprotein receptor-related protein 4 EMBV3_15516 GTGGATACGTTTGTAGCACCATCTCCTGCAACCACTGCCTCGCCAGCAAAAGTGGATTCT Gene GeneID:516917|SNAP91:NM_001105378:53_cdna Constitutive 0 NULL GeneID:516917 9 GENE SNAP91 MGC179307 synaptosomal-associated protein, 91kDa homolog (mouse) EMBV3_15806 TGCCCCAGATGAAGAAGGAAGTCGAGAGCCTCAAGTACCAGTTGGCTTTCAAGAGGGAGA Gene GeneID:517006|GNG13:XM_002697906:519_cdna Constitutive 0 NULL GeneID:517006 25 GENE GNG13 NULL guanine nucleotide binding protein (G protein), gamma 13 EMBV3_19430 AGGTGGCCATGAACCCCACCAACACCATCTTCAACGCCGACCTTTTCCGCGGTACCCTGG Variant GeneID:281827|HSPA2:NM_174344:23_cdna 206^922 1 EMBV3_00942 GeneID:281827 10 GENE HSPA2 HSPA3 MGC127701 heat shock 70kDa protein 2 EMBV3_29675 CCAAACTACCTTCCTGATTCTGGCTGCGACTCCTTAACGATCCTGTTTGAAGAAGGCCTC Gene GeneID:782899|OVCH2:XM_002693122:544_cdna Constitutive 0 NULL GeneID:782899 15 GENE OVCH2 NULL ovochymase 2 EMBV3_16408 TAGACCTACTGCCCGACCCCAACTTTGGTGGCTTGGGATTTTGTGTTCTGCTACCCCGAA Gene GeneID:280993|ALPI:NM_173987:16_cdna Constitutive 0 NULL GeneID:280993 2 GENE ALPI IAP alkaline phosphatase, intestinal EMBV3_15081 TGTTGATTTGCCAGCATTTTTTTAAAGTTAATGCACTACTGCTACTACCTGAAAGATGCC Gene BVT0102_110543 + 0 NULL GK000016.2:4697040-4721587 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25303 ATTCCGAAGGATCAGGGAAGAGGAGATCGAGGTGGATGCTCGAGTGGCAGACAATTCCTT Gene GeneID:513278|NOLC1:NM_001075608:120_cdna Constitutive 1 NULL GeneID:513278 26 GENE NOLC1 MGC140593 nucleolar and coiled-body phosphoprotein 1 EMBV3_28516 AGGTGAAATGCCAGGTGGATGGATTCCAAGAAAACAGGAGTTTACTGAGGTTTAAATGTC Gene GeneID:100335690|LOC100335690:XM_002696882:325_cdna Constitutive 0 NULL GeneID:100335690 22 GENE LOC100335690 NULL hypothetical protein LOC100335690 EMBV3_31211 CTGGCTAAGTTGTCCATCGTCCCTGTGCGAAGAGGCACTGGCATCGTCTCCGCCCCTGTG Variant GeneID:286867|RPS2:NM_001033613:42_cdna 524^622 2 EMBV3_33961 GeneID:286867 25 GENE RPS2 MGC126925 RPS2E ribosomal protein S2 EMBV3_14787 ACTGTGTGATAACTTGTTCCTGGAGGCTGAGGAGTCTCTGGCTGAGTAGCCCCAATCCTT Gene BVV0102_074058 - 1 EMBV3_01038 GK000030.2:104013031-104047705 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23292 CGCTGGATGGCACTGATGTTCTCTTCACCGGACTTTGCCGTCTCCACGGTGCCCGTCACA Variant GeneID:540386|DDAH2:NM_001034704:192_cdna 636^709 1 EMBV3_36420 GeneID:540386 23 GENE DDAH2 MGC128823 dimethylarginine dimethylaminohydrolase 2 EMBV3_29501 GGAAAGCCATGATACAGCAGAACAAGGTCCCCATAAACCGGTACCAAGTCAGGGAGCTGA Gene GeneID:528053|LOC528053:XM_002691123:65_cdna Constitutive 0 NULL GeneID:528053 10 GENE LOC528053 NULL similar to Uncharacterized protein C14orf166B homolog EMBV3_25133 TAACATTCAAGAGCCAACCCCTAAACGTTCCCAGAGCCAATCAGACATGAAAACGATCCG Gene GeneID:539933|FRMD7:XM_002699549:56_cdna Constitutive 0 NULL GeneID:539933 X GENE FRMD7 NULL FERM domain containing 7 EMBV3_14489 TCTGGCAAGACTGCATCACCCTCTTCCTACAGACTGGGATGTGCTATGATGCGGCGATAA Gene GeneID:783297|LOC783297:XM_002700168:90_cdna Constitutive 0 NULL GeneID:783297 X GENE LOC783297 NULL similar to rCG36335 EMBV3_16530 CATGCCTGCAGCTGTGTTTGCTTCTGCGCTTTGTGAGTTGACAAATCATTGTAGTAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32310 TTTTCCCAGCCTTGAGGAGCTCTGCCTTGCTAGCTCCACCTGTAACTTTGTGAGCAACGA Gene GeneID:512690|FBXL6:XM_002692543:160_cdna Constitutive 2 NULL GeneID:512690 14 GENE FBXL6 NULL F-box and leucine-rich repeat protein 6 EMBV3_39794 GAGATCAGATGTCTCCCGCTCGGGAAAGCCTGTGTGTGAAAAGCCTCAGAAGGACCCCAA Gene GeneID:513994|LRRK1:XM_002696499:73_cdna Constitutive 0 NULL GeneID:513994 21 GENE LRRK1 NULL leucine-rich repeat kinase 1 EMBV3_25379 AACTTCATCTCCATGCCATCCAGTCCCAGAATTGCCCACAAGTTGATCATGCCTTGCTCC Gene BVT0102_120516 + 1 EMBV3_03451 GK000002.2:129437770-129501726 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106827 TCONS_00106829 TCONS_00106828 TCONS_00106830 1 XLOC_062898 NonCoding TCONS_00106828 XLOC_062898 NonCoding NonCoding - 2:129486631-129497214 - TSS78541 565 1 TCONS_00106828_2 70 0.886725663716814 2 0.946796446796447 3.36902808459722e-10 0 4.97185429116531e-09 4.51286377080542e-07 0 2.16241805903485e-07 0 0.00206229940989893 0 7.45501700441015e-10 0 0 7.6975009913344e-23 0 3.88795383096632e-08 0 0 0 4.87699711090254e-07 0 0 0 0 0 4.07662332264455e-07 4.19745616873305e-07 0 0 0 0 NM_001078069.2 PTPN18 Bos taurus protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18), mRNA. 3e-62 242 78.55 0.520353982300885 0 noncoding 0 0 1 1 0.0354177295010075 0.757482715978786 0.0264510771290146 0.6670723670482 TGGAGCTCTGGATTCCCAAGTAATATTCGTGCATGAATCAGACGTCCCTCCAGATGAAAGCTGCTGACCACAAGACGATAGACTCTAGACTGGCTGAAACCAGAAGGTTGTTGATGCTTGAAACTTCATCTCCATGCCATCCAGTCCCAGAATTGCCCACAAGTTGATCATGCCTTGCTCCTTGAACACTATAAAACTCCTCACTGTCCCCTACAGGGTGGGTCACACAGTCTTGAGGGCATTAGCCCACTGTGGCCGCCTTTGCCTGACAAACCACGAAAAGCTACTCTTTTCTATGTTACCCCAAATGCTGTCTCCATGTTTCTATTCAGGGAACAGAGCCTGAGTTATGGCAACAGATCCAATGTTTACATCTTTTCCTGTTTTAAGTTGAATTGAGTGTGTACGAGCTCAGCCATTTCAGTCGTGTCCGACTCTTTGTGACTCTATGGACTGTAGCTCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGAGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCTGACTCAGGGATCGAACCCGCGTC TCONS_00103945 r 5' 35283 TCONS_00103945 r 5' 25231 EMBV3_05527 GCCCCCAAGTCCCAAGTCCGTTGTTCTCAACCACTAATAAATACCACATCCCAGGGTGGT Gene BVV0102_271151 - 1 EMBV3_26914 GK000005.2:113541201-113553951 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196565 TCONS_00196568 TCONS_00196566 TCONS_00196567 TCONS_00196570 TCONS_00196563 TCONS_00196569 TCONS_00196562 TCONS_00196564 1 XLOC_118378 Coding TCONS_00196567 XLOC_118378 Coding Coding NAGA 5:113552202-113562090 j TSS146245 3324 1 TCONS_00196567_3 293 0.0514440433212996 8 0.664610094062911 1.03519127285799e-14 7.48520889923164e-13 6.21662753429403e-06 3.29722562706809e-13 5.12178693138466e-111 1.08427269930662e-11 2.74819653652303e-05 5.32655723537579e-06 4.55726245523866e-05 8.50676673465338e-05 0.000161141958041161 1.6948811422572e-05 9.49410482282408e-06 0.000102610810758911 3.38782507939935e-06 0.00205014236493312 7.50822813432142e-09 0.00787642617451606 0.000105693537532983 7.26772132378902e-05 7.36251918662074e-78 0.0041451180391775 0.00150309371051058 0.00148904496034757 8.32341837386658e-06 0 0 0.000356555738784825 0.000171990408754007 0.000371396613038256 XM_005207406.1 NAGA PREDICTED: Bos taurus N-acetylgalactosaminidase, alpha- (NAGA), 0.0 4888 100.00 0.814981949458484 NM_000262.2 NAGA Homo sapiens N-acetylgalactosaminidase, alpha- (NAGA), mRNA. 0.0 1122 77.69 0.424187725631769 TCONS_00196567_3 sp|Q58DH9|NAGAB_BOVIN NAGAB_BOVIN Alpha-N-acetylgalactosaminidase; 6e-150 431 91.49 0.798634812286689 1 coding 1 1 1 1 0.0165486704031185 0.912014710448651 0.0804385787311775 0.301395556358534 AGGCGGAGGCTCAGATCGCAGCGGAAGAGTCGTGCTTTTCTAACGTTTCTTAGCTTCCAAATCCCGACATACAGAGGCTGGTAAAAGCAGAGCAGATCTGGTCAGGTCCTGAGACCGCTGAGTCCAGAGCAATGTTGCTGAAGACAGGTGCTAGTCCTGGAGAACGGGCTCCTGCGGAAGCCACCCATGGGCTGGCTGGCCTGGGAACGCTTCCGCTGCAACATCGACTGCAGTGAGGACCCGAAGAACTGCATCAGTGAGCAGCTCTTCATGGAGATGGCTGACCGGCTGGCGCAGGATGGATGGCGGGACCTGGGCTACGTATACCTTAACATCGATGACTGCTGGATTGGTGGACGTGATGCCAAGGGCAACCTGGTGCCGGATCGCAAGCGCTTCCCCCACGGCATTGCCTTCCTGGCTGACTATGTGAACTACACCCTGCTGGCAGACATCTGCAACCTCTGGCGCAACTTCGATGACATCCAGGACTCCTGGAGGAGCGTGCTGTCCGTCTTGGACTGGTTTGTGACCCACCAGGATGTGCTGCAGCCGATAGCCGGCCCAGGGCACTGGAACGACCCAGACATGTTGCTCATCGGGAACTTTGGCCTCAGCTTCGAGCAAGCCCGAGCCCAGATGGCCCTGTGGACGGTGCTGGCGGCCCCCCTGTTCATGTCCACAGACCTGCGTACCATCTCTGCCCAGAACATGGACATCCTGCAGAATCCACTCATGATCAAAATCAACCAGGATCCCTTAGGCATCCAGGGACGCAGGATTCTCAAGGAGAAATCCCACATTGAAGTGTACTTGCGGCCCCTGGCCAGTGAGGCCAGCGCCATCGTCTTCTTCAGCCGCAGGATGGACATGCCTTATCACTACCATTCGTCCCTCGCCCGCCTGAACTTCAGCAGCTCCGTGGTGTATGAGGCCCAGGACGTCTACACGGGTGACATCATCAGTGGCCTCCAGGATAAAACCAACTTCACCGTGATCATCAACCCTTCGGGGGTGGTGATGTGGTACCTGTACCCCATCAGGAAGCTGGAGATACCCCAGCAGTGAGGGGCTGGGGCCAGTGACAGGCTGTGGCGGCACCACTGAGCCTGGACCATGGAGGGTCCGTGTGCTGAGGGCCAGTGCGGTGGGGTTCTCTGCTCTCCAGGCCCGGTTGGCGATCTGACCTCATCAGACTTGGGGTGCAAGCTGAGGGCCAGGTCCCGCTCCCTGCCGGAGCATGAACTCTCCAGGAAACTCGTCCCAGGGAGACTTCCTGTGGCTCTGTGGGCCTCTACCGTGTCTGCACAGCCCCACAGATACTGTTGAACAGCTCGGTCAGCTTCCCCTGTGGGGACAGGCAGGGACACGCATATCTGTCAGGACACGAGCCTTGGACCTTCTGTTTGTTGATTCTGAAATCAGGAATTTTGGGAATTTTTCTTATAATTAGGAGTAGAGCTCTGATCTCTTGTCAGGAACCCCCATGAATTATGCGATTAACTTTCCTGCCCGGAGAAGGCCTTGCAGGCTGACACGGCCTGGGAGTGACCTTGGTTCCTTCGGGTCACCAATAAAGCTGTTCTTTTGTCAAGCAGTTGCAACATGGGCCTGGGGCCATGGTTGGTAGGGACTCTGGGGAGCACGACACGAGGTGCCGGTTTCAGATTTCGCCTCACAGGGAAGACATGTGGCATCGTCCGGCCCCTCACTCCACAATGACTGGCAGATCGCACTTCTGACCATGCCAGGCTTGCCTCCCACCCCAGGCCATCCCTGCTCCGCCCAGCATCGTGGTGGTGACAACACAGAGCGGCTGGCTAGTGATGTCCCAGGCCCTCTCCCCTACCCCGTCCACATGTTACAGGGTCTGCCTGCCATGACCACACTCAGCGGCCCCTCGGCTGCACAGGGAAAGGCCCTGGTCTGCTGAGGGATGCTGCGTCATTGTCTGGGCTGTCTTTCAGGTGCCCTCCCCCTTTCTGACAGGCCCTCGGTCAACGGCGCCCCTGGTTGGAGCAGCCGAGGGCAGTGAGCTCTGCCTTTCCCCCACAGGGGCCACACAGCTTATCCTCTGCCCATCAGTGCTCCCAGCTCCCTGCTGAGCTTCTCCTCTCCTACCTGGGTGAGAGGACTTTCAGCCCCCTCAGCTGTGTCCAAAGGAAGGTCCAGGGGCTCTCTGTGACCTGAAGTATATTTCCTGCTCCTCCTCCTAGGGAAAGGGGTATCCAAAGAATGGCTGGTTCTTGACTCCGGTTCCTCGTTCCCAAGCCCTCTCTTTAGCTAAGGCCTCAGGGCGTCTGTCTTCCACGGTGGCTCTCGTTCCCCTTTGGAAAGGGGCAGCAGAGCAGGTGAGGTAGGTTCTCCTTGTGCTTTGGAGCACACATTGGAGCACCCGGGCCCCAGGCTTTCGTGGTGTCCGCTGTAGGAACTCTTCTGGGGGCTCTCCCATGTTCCCTTCCTCAGGGTTCTAAGGTCCTTATGTTAGAGTGTGGTGGAAAGAACTCTCAAATGTGCGTTTTATAGGGTAATTTAAGATCTCTGGAGTCCAGGGTCATCAGAGGAAGCTCCCTTTTCCCAGTTGATGTCTTGAGGCTGTGGGTCACTCAGGAGGACCCACGCTTACTTAGCCCAGGCCTCTGCCCTCTGAGGTCTGTCAGCTCCAGCTCCAGGTCTTGGTCATAGTGCTGCTCGAGCCAAATGGAACGGTCTGGGCAGGAACACTTCTTTCGCCAGTCCCAGGAAAGAAAGCTTTTCCACCACCCTGGGATGTGGTATTTATTAGTGGTTGAGAACAACGGACTTGGGACTTGGGGCCAGGGATCAGCCTGGATGTGACCAGTTGATTACTGTGCCCTTCCAGACCCAGAGATAGTTTTTACTTGCTGTATAACTTTATCCTGAGGTACCTGATCGGTACTGTAGCTTTAGCCTTTATTCTCTTAACACACGGCGTGCCTGTCTTCTACGACATTGTTTTACTGCCTTTCACCAAAGGCCAGTTTGGAACTCAGTTATTTTTCCCAAGTTCAGCCTTGTTTGGACCCAAGAGTACCCCTTCTGTTTTTTTTAAAAAAACATTTTATTATGGAAATTTTTAAAAATAAAAACTGGTAATTAAACCTTCATGTACCCATCACCCAGATCCAACAGCCATCAACCCCGTGCCATTGTTTTATATCTCTCATCCCACACATACTTTTTTGCATGTGAGCCGGAGTATTGAGAGCAAATCAAAGAAAACTCTAAACACCACTGTGTAGCTCTAACTGATCATAGGGCCTTGAAAAGAATATATATCCTTAATAAAAATTTTAATCTGAT EMBV3_16439 CGTGCCGGAACTGTGATTACCAGCAGGAAGCCGACAACAGCTGCATCTACGTCAACAAAA Gene GeneID:614472|POLR2I:NM_001076329:730_cdna Constitutive 0 NULL GeneID:614472 18 GENE POLR2I MGC133488 RPB14.5 RPB9 polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa EMBV3_19902 TTTTGTAACCTTTGGGATCACTAACTGCTTCCTGCTCACAGCGATGGGCTACGACCGCTA Gene GeneID:616952|LOC616952:XM_002685901:134_cdna Constitutive 0 NULL GeneID:616952 3 GENE LOC616952 NULL similar to olfactory receptor, family 10, subfamily J, member 1 EMBV3_10864 ACTGGAAGGGTAACTTTGCTCCATGTTGCTCCAAACAAGGTGGATCCTGAAGGTGCTGCA Gene BVT0102_126348 - 1 EMBV3_33679 GK000018.2:50369399-50440500 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39089 AGGGGCGTCCAGGGCATCCGTGGGGAGACGGTGAACTGCCTGCATACCCTGAGCTACCCC Variant GeneID:531489|WDR34:XM_002691633:324_cdna 187^435 1 EMBV3_12786 GeneID:531489 11 GENE WDR34 NULL WD repeat domain 34 EMBV3_33630 CTGGTCAGCTCGGTCCACCACTGAATCATCTTTTATCAGCACCACTCTGAGCAGGACAAG Gene BVT0102_055774 + 0 NULL GK000013.2:16640880-17093613 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044537 TCONS_00044536 1 XLOC_026229 NonCoding TCONS_00044536 XLOC_026229 NonCoding NonCoding - 13:17031842-17033773 - TSS32730 1166 2 TCONS_00044536_1 50 3 0.39740932642487 0.0023711991421572 0.000653848782756761 0.000634438426120728 0.00045358322605241 0.000599393563832095 0.000142389003565628 0.000597294637353362 7.74437892581905e-08 0.000201773686125833 3.88156463338795e-05 0 0 7.71314725159927e-13 2.45537747956358e-09 0 0 0 0 0.00144585551628092 0.000849219941827038 0.000524296248360908 1.5906031977304e-06 0 0 0.00163239128039011 0.00134689368186891 0.000582057868296952 0 6.24517927229207e-05 0 0 noncoding 0 0 0 0 -0.812378431243064 0.0692602987548523 -0.016849417971773 0.711632197373594 AAATGTCATCCTCCTTCCCAGGAGACACAGCATTTTTTAAAAAAGATTAAAGCACTGGCGGAAAGGACGGTGGTGATCACAGCTTCTAGAGAATAACGTTAAGGGGAGCAACAACCAGACCTATGTTCAGAAAGGGACCTGCACGTTCTCCATACCCGGGGACGGACCATTCCACGGACAAGGAGAGAGGCGCCTTCTCATTCTCCCCGTGTCACCAGCCCCCTCCTGGTCAGCTCGGTCCACCACTGAATCATCTTTTATCAGCACCACTCTGAGCAGGACAAGCCCAGGGACAAAGCTTTCTCCTTGCAGAAACCCCAGCGTCTCCCAGGCGAGCCTGCCCCGGAGCTTGTCTTCATCCAGGCGCGCCCGCCCGCAGGGAGCGCCGAGTTGTTAGCGTGAAAGGTCCATTTCACACTGATAACCCGAGCTCTTGAGAACCGAATAAAATAAAGGCACTAACTCTAGTTTCTTAACGTGTGGCCCCCAAAGCTGAAAAAACACTCTCACCCCAAGATTACAGGATTGAGCACCAGTTTTTTGTTTTGTTTTCTGACATCTATCAAAACTGGCCTCCTCCTGCCCCAGGCCCCTGGAAAGAAACTTGGCTTAGTTTAGAAGTGAATGTTGGCAGCCCCGTCTGCTTCTCGAGCAAACGCCAAGAAAACTTTATTTCCCTCCGTGGCCAGGCTGCCACCGCATCACACACCTCTCCTTCCCAGGGCGTGCGGGAAACAGTAAACTCTCCGCCACCGTCTTCCTTCCCTCCCTCCCGCCCCGCAGTTTAGGTGAGAGAAAAGCCCAGAAGGAAGCGGAGGCGCCCCAGCCCCTGGCCCCGACGGCCTCTACCCAACCAAGGTCCGCGCCTCGCGGGCGTCCCGCGCGCCACAAACCGCGGAAACGAGACCCAAAGTTTGCAGCGCTTGTCGCCCTTTCCGAGTTCACTGTCCTGCCGCCTGCCCCGTCCTGGACCGGCTCGGAGCCCGAGCCCTTGAAGCTGCAGTGTAACGTCTTACCGGTGTCTCGTCATTGGAGGATTTTCACGCCTGGCTGGTGGTCCTGATGGTCCTGCTGAGGATAAGTGGGGTGCTTTTGTTCTGTGCTCTAGAGAATAACTTTTTCATTCAGGATAGACTACTGGTTACCAGCACTGCAGGCCTGTTCCC TCONS_00042058 TCONS_00042059 r 5' 522 TCONS_00042058 TCONS_00042059 r 5' 522 EMBV3_04461 GTGACAGAGGCAAGTTTCTGCTTCAGGTCTTCACCAAGTCCCTGTTTGCGGAGGACACTT Gene GeneID:513050|HPDL:NM_001099371:149_cdna Constitutive 0 NULL GeneID:513050 3 GENE HPDL NULL 4-hydroxyphenylpyruvate dioxygenase-like EMBV3_33699 CTCCTTCAGGGGATCTTCCCGATCCAGGGACCAACCCTGCGATTCACAGATGATTATTAA Gene GeneID:540301|PNMA2:NM_001046473:7_cdna Constitutive 1 NULL GeneID:540301 8 GENE PNMA2 MGC137318 paraneoplastic antigen MA2 EMBV3_33179 GGCAGATCAAGATTTGGGAGGTACAGACAGGTAAACAGATTCAGGTGTTATCGGGCCACC Variant GeneID:508388|WSB2:NM_001075357:90_cdna 486^617 3 EMBV3_20605 GeneID:508388 17 GENE WSB2 NULL WD repeat and SOCS box-containing 2 EMBV3_19035 GACACAGTTAGGTCTGGGTCATTGTTTATTAGGGGAGAGCAAGTGAGAGGCTCAGAGTCC Gene BVV0102_075932 + 0 NULL GK000013.2:74179112-74191214 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043877 TCONS_00043875 TCONS_00043878 TCONS_00043876 TCONS_00043874 1 XLOC_026058 Coding TCONS_00043877 XLOC_026058 Coding Coding STK4 13:74092576-74183088 = TSS32364 5960 1 TCONS_00043877_1 487 0.160738255033557 11 0.934273182265139 0.0052706458597308 0.00432088500022995 0.00310981349394597 0.00235792622917207 0.000160552458094571 0.000814007342767852 0.00206269660278788 0.00242358013069773 0.00421618961150254 0.000102773923704799 4.65747950046481e-11 4.30009419806374e-11 0.000679414942679992 0.00176078657619551 0.0003583310101244 0.000870576256565555 1.7608765009089e-10 0.00231100355042663 0.00209205189985624 0.00395009170441841 0.00214337992967419 0.000446965947739118 0.000102661781037536 0.000727642447850642 0.00608181047634877 0.00507996644730846 0.00321836459135489 0.000457087188490746 8.70111347947365e-05 1.74054686991465e-07 NM_001015602.1 STK4 Bos taurus serine/threonine kinase 4 (STK4), mRNA. 0.0 3429 99.79 0.320469798657718 NM_006282.2 STK4 Homo sapiens serine/threonine kinase 4 (STK4), mRNA. 0.0 3067 82.20 0.514261744966443 TCONS_00043877_1 sp|Q5E9L6|STK4_BOVIN STK4_BOVIN Serine/threonine-protein kinase 4; 0.0 1013 100.00 0.997946611909651 3 coding 0 0 0 0 0.10429246408398 0.896206544419388 -0.0212502874580145 0.726619777234136 GGGCGGAAAGCGGAAGTGTGGGACGGTCTGCTGGGCGGGATCGAGGAGGTCCCGGGGGAGGATGGAGCAGTGAACGGGTCTGGGCGGCTGCTGGCAGCGCCATGGAGACGGTGCAGCTTAGGAACCCGCCGCGCCGGCAGCTGAAAAAGTTGGATGAAGATAGTTTAACTAAACAACCGGAAGAAGTGTTTGATGTCTTAGAGAAACTTGGAGAAGGGTCCTATGGCAGCGTGTACAAAGCTATTCATAAAGAGACCGGTCAGATTGTTGCTATTAAGCAAGTTCCTGTGGAATCAGACCTGCAGGAGATAATCAAAGAAATCTCTATCATGCAGCAATGTGACAGCCCTCATGTAGTCAAATATTACGGCAGTTACTTTAAGAACACAGACTTGTGGATCGTGATGGAGTACTGTGGGGCTGGTTCTGTATCTGATATTATTCGATTACGAAATAAAACGTTAACAGAAGATGAAATAGCTACAATATTACAGTCAACACTTAAGGGACTGGAATATCTTCATTTTATGAGAAAAATACACCGAGATATCAAAGCAGGAAATATTTTGCTTAATACAGAAGGTCATGCAAAACTTGCAGATTTTGGGGTAGCAGGTCAACTTACAGATACCATGGCCAAGCGAAATACAGTGATAGGAACACCTTTTTGGATGGCTCCAGAAGTGATCCAGGAAATTGGGTACAACTGTGTAGCAGACATCTGGTCATTGGGAATAACAGCCATAGAAATGGCTGAAGGAAAGCCTCCATATGCTGATATCCATCCAATGAGGGCCATCTTCATGATTCCTACCAACCCACCCCCCACATTCCGAAAGCCGGAACTGTGGTCAGATAGCTTCATGGATTTTGTGAAGCAGTGTCTTGTCAAGAGCCCCGAGCAGAGAGCCACAGCCACTCAACTCCTCCAGCACCCGTTTGTCAAGAGTGCCAAAGGAGTGTCCATACTGCGGGACTTGATTAATGAAGCCATGGACGTGAAGCTGAAACGCCAGGAGGCCCAGCAGCGGGAGGTGGACCAGGAGGAGGAAGAAAACTCTGAGGAGGATGAGCTAGATTCTGGCACGATGGTCCGAGCAGCAGGGGATGAGATGGGCACTGTCCGAGTAGCCAGCAGCATGAGTGACGGGGCCAATACGATGATTGAGCACGATGACACGTTGCCGTCCCAGCTGGGCACCATGGTGATCAACACGGAGGACGAGGAAGAAGAAGGCACGATGAAAAGAAGGGACGAGACCATGCAGCCTGCCAGACCATCGTTCCTTGAATATTTCGAACAAAAAGAAAAGGAAAATCAGATCAACAGCTTCGGCAAGAGTGTCCCTGGCCCATTGCAGAACTCCTCAGATTGGAAAGTTCCCCAGGATGGAGACTATGAATTCCTGAAGAGTTGGACGGTGGAAGACCTTCAGAAGAGGCTCCTGGCCCTGGACCCCATGATGGAGCAGGAGATTGAGGAGATCCGGCAGAAGTACCAGTCGAAGCGGCAGCCCATCCTGGACGCCATTGAGGCCAAGAAGCGGCGGCAGCAGAACTTCTGAGGGCAGCCTGGCCCCAGGCCGCCAGTGAACTCTGGCTCACTCGCCCCTCCAGCTCGCCTCCCTCCTTTCTCCAGAGCCCCCTCTGTGAACTCAGGAACCAAGAAAGTGCGCCACTGGCCAGGGCTGCGGAGCCAGTCGGCACGCTGCCCCGCTGTGTGTATTTGAAGTTGGACAGGTATATATATATCATTTCCCAGGACTCATGTGGGCGCTTTGAACCTCAGACTTTCCCACCCCAGAACCAGAGACTCCTCGTCGAGTGAGAGCTGGGAAAGTGTCACGTGGTCTCTTTGTTTTTCTTCTCCCAGTAGCTTTCAGTGGTTCTTTCTGGAAGACTTTTTTTAAAAAAATATATAAATATGCACATATATATATAAATTATAACTAGATTCCCCACGTGGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAAACAGTTGCCTCTTTTCTGTAAGATAACGGTACTGTGGAACACGAGGGAGGAGGACACCAGGAGGCTGCGGGGGCCCTCCAGCCCCTGGAGCCGGCCTCACCCTCCGGCTGGGCTGTGCTGAACAGATGAGGTCGGGGTCAGCTCCTTCACCATGCTTTCAGCCTTACGCGGGCCACCCCTGGCTTCCAGAGCTATTAGTGATGTCCTGGGAAAGACAATTTGCATTGCCTTTCAGAGTCTCAGGAGAAGCCTGGCGCCCTCCTTGCGAGCTTGGCCTTTGCAGTTTCAACACCCTTCATCCACCTCCACTCTCCCAACTGCCTAGAGTCACAGCACAGACACTGCCCAGTGCCTTAAGAGGAGACGTGATCAAGCGAGGGCACAGGCCTACCCGGAACTCCCAGCAAAGTGGGGCTGCATTCAGTCCACAAAAGGGGAAAAGGCTTTCCAAGTTCTCGTCATTCATGTGAAGAGGACACCCGTGGCATTTTGCTCCATGTTCCTTGCAGACAGGGGTAGGGGGCGTTGCTTTTGTGACCCACATTCAAATATGTGACTGTTTTCTTTTCTCATTTTACTGCTTGGGGTCTGGAAAGGGTAAATGAATATCAGACTAAGATTTGTCCTCCAGGAGACTCAACCCAGATGTGTAGGATGCCAAAACTGGAAGGGACCATATAGATACCACCTGGCCTGATGGCGGCCCAGAGCAGGGAAGTGACATGGCCCAAATCACGAAGCAAATGAAGCGCTGGGACTGGATGGTGGGGCCCCTCACTCCTGCTTCACTGGGCTAAGCAGCCCCTTCTCTGAAGGAAGACGCTCGTGTCCGTTTTGGTGAAGTTCCAAGGAACCCTGCTCACGGGAACTTGCCTGGCTTCGTCTCTTCAGTAGGCGGCTGGCTGTGAAGAGATTCCCACGGGGAGCCAAGGTCATTCTGTTGCAGCCATCCCACAAGCTCTCCTGCATCTGCCGGATAGCACATGAGCATCACACAGGTAGACGCAGAGCCGAAAGCAGGTCAGAGGGTTTTGCAACAGACAGCGCTGAGCCATCCCTCTGCAGCTTTGGCTCTAGGCCACGTGTCACTTAGTCACATGGCCGAGAGCAGACAGTTGCGAAAGGCGACTGCCTTTTTATTTTTTAGAACCTCTTCCCCTCAGATAGGGGAGCCGTGACTGGGTTGCACCTAAGGATACTGTAATTTGACTCCATAGTTGCTCTTGCTGCCCAAAGCTGGGAATCAGTGGAGAGCCAGGGATGTTCCTCTTCTGTGGCCAGATTCTGTTCTTTGCAATGACAGCAAGTTATTGAAAAGGCAAGAGGCCATTGCTGGTCTGCAGGGCTTGGCCAGTTATGCAGCTACTTGGCAGATACAGAGAACAGAGGACAATTTGAGGATCCTGCTATAATAATAAAGGGCAGCTAGCAATCATGACCACTTACTATATGCCAGGCACTGAGCTAGGTAGGTAGGCTCTTTATGTCAGCTCCAACCTCCCCAATAACTCTGTGAATTAAGTATTTTATCTCCATTTCATAGAGGATGAAGCAAGTTCAGAGAGAAAAAAAGTTCTTTCCATAGGTGGTACAGCTAGTAAGTGATAGAATCAGGATTCATAGCATCACCATGTAGGACCAGTATTTACAAGGAAGAGGAAAACCACAAGTCTTTTTAAAAATTTCATTTTATTCACATATAGTTGATTTACAGTGTTTTGTTAGTTCTGCTGTATAGTAAAGTGACTCCGTTATACATCCTTTTTCATACTCTTTCCCACTGTATTTTATTGCAGGATATTGAATATAGTTCCCTGTGCTATACAGTGAGACCTTGTTGTTTATCCAACAAGCCTTCTTAAAAAAAAGGAAGTGACCACTTTTCTTGCACAGACTAAAAAACCCAGGCTGGCATTTTTAGGTTGGGAAACCACTGAATCGGTCAAGTCTGACAGTCAAGTGAGTTAAAAAACAAAGTATGGAGCATGAATTTCCCTATACCATCTGCTGTGCTAATTAACAGTCCTGCCTCAGTTTCCCTCTCTCCCTCCCTCCCTCTCTCTCTCTCTGTTTTTTAAAGGATTTTGCACTTGGCCAGACAGGAGAGGAATGCCCATTTTCTCCCTTCCTAAGCTAGATCCAAGTAAAAGAAGGTTCAGTTTTTCCCCATAAATATTCTTGGGTGATGAGTCTTGATCTGAAGTTTATTTTGTTTCAGTTCCTTGTGTGCATCCACCATGCTGGTCCAAAAAGTGCATTGCTCTCCAGTTGAGCTAGACGGAGCCCTTTGGCCAGAAGTCAATGTATTTTGGATGAGATAGATTTTCTGACAAGGTGTGTTTGTTTTCTTATGCCAGAAGGCAGAGAAGTCAATCCTAGTCATTTTTCTCCTTGGATACTAAATTCACATAGGTCAGCTGGCTTCCTGTAGAGCCCTGAGCTTCATCATTTGTGACTCCAGCTTCCACGGGACTCTGAGCCTCTCACTTGTTCTCCCCTAATAAACAATGACCCAGACCTAACTGTGTCTTTTAAAAATCTCAGATCCTCCAGGAACATCTTTATTGCTTCCTCATCAGTAATTTTGCAGCAAATTTCTATTTTTGTTTTTCCTTGTCTGTTCTCCCAGCCACCAGTTGATAGACAGATGAACTGGTGGATAAATGTTTGGTGTGATGGATAGATAGATACAGACGACAGACAGAACCAGTACTCTGAAGCAACTTAAGAACTATGGCCTTGATTTCTTGAAGCTGTAGGTTCTGATCCAGGAAACATTTATTTAGCACCTGCTGCCAGAAATTTATTATACCATTTCAAACTCAATAGCACTTACTGGTATCAGGAATGAGAGAGGTGACACCAGTCTAGACCCTACAGATATTAAAAGGCTAATAACAATTTTATGAACAACTTAAATAGACAAATTCCTTGAAAGATACAAAGTACCAAATCTCACTCAAGGAGAAGGAGATAATCTGAACAGCCCAACATCTACTAAAACTTAATATCTCTGAGAGATACAGGTATCTTTGTCCTCATTTTACAGAAAAGGAAACCAAGGCTCCAAGAGGCAAAGTCTGTTGCTCAAGGTCAGGTAACTAGCATACAGCAGAGCCAGAGTTCATATCCAGGTCTTTTCTTCCAGTGCCCTTTCTAGCATACCATGTTGCCTCTAAAGACTGCAGCTCCTTTTTTTTACCTGAAAATTGTTCCTGCCCAGTGCACATCCTATCTGCCATCTTTCTTAAGCACTGTGTCTGTGTTTTCATCAGGATTATAGTCATTGTATTTGGAATTGATGTACTTTTTTGTGTTTGGGGTGGGGGGCGGGGCGGGAAGAAAATCTCTTCCACCAGCTTGCACTCGGACCAACTTGGAAAAAAAAAGCTTAAATGCTGTTGCAGACGTACAACTTAAAAATGTGAAGTTTGTAGCTTTAACTTTTTGTAACAAAAACTAATAACACTGGCTTAAGTGCTGACTTGAAATGCTATTTTATAAAGTTTGGATGTAAATAATCAATTGAGGTCAGCAGTTTGTATATGTATGAGACATAGCTTCCTCCATTGCCCTTTTTTTTTTTTAAATTGAGATGCTTCCTATGTGCTTTTATGTTAGAATTGTTCTCCCTCCTTCCTCCTTCCTCCACTTTGTCACCTTTGTTTTAAATAAACTGTCCTTTGGATCAGAGACTGTTCTCTTTTTAAAAACAACATCCTCCATCTATAACCTGGATGATGGTATTGTGAACCATTGACTCTGTGCTGTGTTTATTCCAGAATCCAAAGCCAGGGGAGAGGCAGGTGGCGTAGGGATTAAATTTTTGTTGGGACACCTGCTACGTGCCAGGTACTGAGCTAATTGTCAGGGGTTTAAAGATGGAACCAGACACAGCTCTGGCAGGCCACTCAGGGAGTCAGTCCAGCCCACAAGCACACAACATTGAAAATATTATGG EMBV3_34185 CTTCCACGCTGAGCTCCTACCCATCTTCAGTCCCGAACTCTCTCCAAGAAACCTGGTTCT Gene GeneID:532204|C3H1orf66:NM_001015641:168_cdna Constitutive 1 NULL GeneID:532204 3 GENE C3H1orf66 C1orf66 CGI-41 chromosome 1 open reading frame 66 ortholog EMBV3_34017 AAGTACAGGGAGAGCAACAGGCTTGGTTTGGGGTCATCCTGTATATCCTCCTGGTGGGCT Variant GeneID:282162|CAMK2G:NM_001097564:239_cdna 456^539 2 EMBV3_02937 GeneID:282162 28 GENE CAMK2G NULL calcium/calmodulin-dependent protein kinase II gamma EMBV3_26460 CATGAGCAGAGCGACAAGGAACAGAAGCTACCAGAGGCAGAGAAGGTCAAAATACATGAG Gene GeneID:519496|SPZ1:NM_001040540:17_cdna Constitutive 0 NULL GeneID:519496 20 GENE SPZ1 MGC133987 spermatogenic leucine zipper 1 EMBV3_07327 GGCTCTGAGGCCAATGCTGGTGGATGGGAATGGATTAGCAATGACGTGCTCAATTACGTT Gene GeneID:404114|REG3A:NM_205787:32_cdna Constitutive 0 NULL GeneID:404114 11 GENE REG3A PTP regenerating islet-derived 3 alpha EMBV3_01587 CCAGATCCTAGCTGGCCGAGAAGAAATCGCCCATAGCATCCAGACCTTACTTGATGATGC Gene GeneID:519212|STOML3:NM_001080909:121_cdna Constitutive 0 NULL GeneID:519212 12 GENE STOML3 NULL stomatin (EPB72)-like 3 EMBV3_17979 CCACGCGTTTCTGCAACCAGATCTACCTCTATGGCTTCTGGCCCTTTCCACTAGATCAGA Gene GeneID:540267|ST8SIA2:NM_001098113:50_cdna Constitutive 0 NULL GeneID:540267 21 GENE ST8SIA2 SIAT_8B ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 EMBV3_37330 TCTACAGTAAAAATGGCATAGGTTGCAGGAAAGAGGTCCTGCATCTTGTACATGGGCAAG Gene GeneID:508231|RSBN1:XM_002686134:228_cdna Constitutive 0 NULL GeneID:508231 3 GENE RSBN1 NULL round spermatid basic protein 1 EMBV3_40839 GAAGAACACTGCCAGGGCGGGCACCAGCAGGGAAGAGCATTCCAGTTCCTGAAAGCAACA Variant GeneID:509740|XAF1:NM_001035075:63_cdna 354^606 1 EMBV3_00678 GeneID:509740 19 GENE XAF1 BIRC4BP HSXIAPAF1 XIAP associated factor 1 EMBV3_18988 GGGGCCCTGCCTTCCAAAAGCCTCCATTGTGAAAAGACCCTTGGTGATTAGTAGAACAAT Gene BVT0102_044074 + 0 NULL GK000002.2:72107567-72166549 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00110047 1 XLOC_065951 NonCoding TCONS_00110047 XLOC_065951 NonCoding NonCoding - 2:72160764-72162901 - TSS81668 2137 4 TCONS_00110047_1 56 0.605521759475901 1 0 4.45669878275935e-05 0.000244509427257855 9.52680452857976e-05 0.00014377815767593 2.31033140624102e-06 5.18899260321534e-06 0.000130988150451374 0.000193744223376549 3.69214648231493e-06 0 1.07121455940167e-06 5.68897806823055e-05 0 0 2.55092931383749e-07 1.23592176148117e-05 0 0 8.72458604974701e-05 0.0005656343407544 0.000107252184421281 0 0 1.56898908208035e-05 0.000155623234517304 1.64844747366925e-05 9.32199605868036e-05 8.9894042474535e-06 0 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 5e-110 403 92.42 0.12821712681329 0 noncoding 0 0 0 0 -0.0479139614839908 0.746171592928302 -0.00435345144626972 0.930234762626626 ATTTATTACTGCTCATAGTTTCTGTGGGACAGGAGGTAGGTTGTTCTGACTCAGTCACAGATACATATTGGTGGGGCCTTGTCACAGGAATGCTTGAGGGGCTGGAGCATGGCCCCCCTACATGACTGGCAAGTGGGTGCTGGCTGTTGGAGGGGGGTTCTCAGTTCCTCTCCATCCAGGTGGCTACCTATGGCTTCTTGAGTATCTTCACATGGTGGCTGCTGGCCTCCAGAGTGAACAATTCAAGAGTCAAGGCAGACAGGACAGTGCCATTTATTGGAAGTCACACTGACTTCTGAATTGTTCTACTAATCACCAAGGGTCTTTTCACAATGGAGGCTTTTGGAAGGCAGGGCCCCTTTAGCCTCCAATAAGACTGACTCTCATTCTGGAATTCTCTCTGCTCTGGATGCCTCAGCATGAATGGCCCCACCAGTGTGAACCAGTTCAGCCAAATTGAGAAAGTAAGGAGCTTGGAAATCAGGACAAAAGGAGAGGATTTTGTAGACTTGGGACATTTCCTCATTATTTAAAGGGCTGTGATGTGAAGGAGCAACTATCTTCTTGTGGGCAAAGGCGGATTTACCATGAAGATCATCAGGTTTAAGCTTTAGGGCTCCTGACTTGTATGGGCCCCTTCCAAGACCCTAATTCTCATTTTAAATCTTTAAATTTGTCTTATTTCACTTAAGCCACCCCCCCACCCCACCCCAACTGTATGGTTTTCAGAACTAACAAAACCTGGATCCACTCCTTTCTGTGGCTCCAGAGAGAAAACCAGGACCTAAAATACTGGTGGAAATCTAGAGTAAGGATGTTCATTAACTAGAGGAAAAATCTTTCCATGGCCAGGACCATTCCACCAAAAGTGGGTTATTCTAATCGGCACTTTCAACACCTTGCCCACAGTCATTCTTCCTAATAACACCCTGTCTTTCCTGCTAATAGATCTTTGACTTTTTAAAGAAGCTGATAATGAGCCCTTAATCTCAGAGACAGCAGGATCTCACCTAAACCCCAAGTGTGAATTTTAATTGGTGTAAACCAGTGATGGTATCCCTTTCTCCTGCTATTTCAGGCAGTTAATCCCATTCAATGAGACAGGGTGTGTTGGGACGTCCTTCCCTGAATTAAAGACACAGCTTTACTAGGAATTTACTAGTGGTCCAGTGGTTAAGACTCAACACTTTTACTTCTGTGGACCTGAGAGTTCAGGAAACTAAGATTCTGCAAACTATACGGTGCAACGCCACTCGGCCCCCACAACCCCTGCCAAAAAAAAAAAGACAAGGCTACAGGAAGAGGAGATATTTTCCCCGTTCCCTTTCATTTCTGAAACTCAGAAAGGAGAGCTGGAAACACTGCAGCCCTCCTGTGGTCAGTAGGCTAGAAGCATAAAAACCAGAATCAACATACTAAGGATGGCAGAACAGAAAAAGTAATAGTTTAGGATTCTATAGGACTGTTGACCTGAAGCACTATATGCGGCCAACTACCTTTAGATTACTTAGGTTGAAAAAAAAAAAACCTCATTTTTTAAAGCTACAGTTAATCATGTTCTCTATTACTTGTAGCCAAGTGTATTTTTACTTAATTCAGTTGTGTTTAAGGAGACCGCATTCTCTGTCTCAGGTAGGAGGCAGTTAGCAGGCTGCTGCTGTTGCTGATGCTAAGTCGCTTCAGTCGTGTCCAACTGCGCGACCCCATAGATGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTTGTTCAGTCGGGTCCGACTCTTAGCAACTCCATGGACTGCAGCCTACCAGGCTCCTCTGCCCATGGGATTTTCCAGGCAAGAGTACTAGAGTGGGTTGCCATTACCTTCAAGTTACCAGGCTAATTCACCACAAAACAGGAATGTCGCAGAGGGTATCTATGATTGAAGAGAGGATTTGGTGAGGGGATGAATTGTTACAGGGAATAATCTTTCATGATCAGAGCACACCCTCCTATGACTTAGGTCCTTAGGTTTCATCCACCAAGATTTCATATTTCTTTCAACCTATAACAATCTTTCTCAGCCTATTTCTCTCACC TCONS_00102655 . 5' 3568 TCONS_00102655 . 5' 3568 EMBV3_23622 GGAGCAAGTAATAAAAGCCACAACAGAGGCACAAACTGTTCTGGGGAACCCACTTCTGTG Gene BVV0102_153537 - 1 EMBV3_15717 GK000009.2:45455660-45484428 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20039 AAACTGACTTTGATTTGGGACCTGTTCACTTTGGGGGTACTCATGGGAGGTCCTGCTGCC Gene BVV0102_175635 + 0 NULL GK000023.2:32295591-32385305 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24866 GCAAAGAGGAAATAGTTCAGTTCTTTCAAGGTATATTGAGATCTTCAGAAGTAGCAGGAG Variant GeneID:539850|HNRNPH3:XM_002698859:440_cdna 287^425 3 EMBV3_03638 GeneID:539850 28 GENE HNRNPH3 HNRPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) EMBV3_27127 CCCCGCAGTTCTCCATACAGTGGCCTTACTATGTCCTGGGTTTCAGCATCCTTCTGTTCA Gene GeneID:513111|LOC513111:NM_001098021:167_cdna Constitutive 2 NULL GeneID:513111 25 GENE LOC513111 NULL hypothetical LOC513111 EMBV3_19942 TCATTGTCGCCTCCGTCCTCGTTTTCATCGTTCTGCTCATGATCCGCTACAAGGTCTACG Gene GeneID:100301431|LOC100301431:XR_083918:165_cdna Constitutive 0 NULL GeneID:100301431 18 PSEUDO LOC100301431 NULL similar to leucine rich repeat and fibronectin type III domain containing 3 EMBV3_33637 CTTTCGTGTTGTGCTGTCTTTCTCGTGTCCTCTACCAGTTTTGAATAAGAGAGGGCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00530 TGGGGGCAAGTAAAGACCCCCAAGCCCAGAGTTCTTCCCTAATGTGTTTTCAGCAACAAC Gene BVV0101_042732 + 0 NULL GK000018.2:46954896-46960040 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090514 1 XLOC_055295 NonCoding TCONS_00090514 XLOC_055295 NonCoding NonCoding - 18:46957638-46958277 - TSS67860 639 0.126760563380282 1 0 0 0 0 0 0 0 0 0 0 0 1.79122581068608e-05 0 0 0 0 0 0 0 0 0.00052894652880341 0 0 0 0 0.000292752980992613 0 0 0 0 0 XM_003583466.2 ZNF577 PREDICTED: Bos taurus zinc finger protein 577 (ZNF577), mRNA. 4e-16 89.7 85.19 0.125195618153365 0 noncoding 0 0 0 0 -0.026416156074908 0.863650553255982 -0.0104357449885243 0.844015244870315 GCTATTCCTTGCTGCTCAGACCAGAAGGCACAGGGAGCAAAGTGGAACCCAGAGGAGAGGGGCTGCCCTGAGGGGAGCAGTGATCCTGGCAAGAGGGGCTCCATTTTCTGTGGGGCCCCCCATTACCAAATCCTACTGAAAGCCAGCAGGCACAGGGGTCCAGGTGATGCTTCCCACCCCAGTCAGCCTCCAGGACTCAGGACAGAAAGGGGACTGGGGGCAAGTAAAGACCCCCAAGCCCAGAGTTCTTCCCTAATGTGTTTTCAGCAACAACTCAGGAACCAGTTGTTCCGAGAGACCTGGTGTTGGGCATGGAAAACTAGACACCAGAGAGCCACAAAATGGCTCCCATAACCCATTCACCAGCTCGTTCTTCAGTGCTTCTGGGCCCTGTACTACACAACTGACAGGTCCTAGATACTGGGCCCCCAGACCTGGGCCAGGCATGCCAGGCACACTGCGTAAAGTCCAGCAATTGAGAGATGGAGACACCTAAAATCACATTTCACGGGCTGATTGAAACTCAGATGCTTGCCTAGCCACCCCACCCTTCAAGACCCTGGTGGTCTAGTGGTTAAGACTCCCGAGTTTCCACTGCAGGGGAGGCAGGTTCAATCCCTGATTGGGGAACTAAGATCC TCONS_00083495 . 3' 440 TCONS_00083495 . 3' 1078 EMBV3_11085 GTCTGAAGAATCTGGAGTAGGAACAAGAGGGGTTTAAGGCTGGACATGGAGAGTAGGGCT Gene BVV0101_034167 + 1 EMBV3_11495 GK000011.2:100132439-100143652 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10098 GGTGCCCCTGATGATGAAGCAGTACGAATATTTTTAGAATTCGAGAGGGTTGAGTCAGCA Gene GeneID:512694|RBM17:NM_001101083:13_cdna UTR3_Alt 2 NULL GeneID:512694 13 GENE RBM17 NULL RNA binding motif protein 17 EMBV3_28772 TCTGTGGCTCCCAGTTGTAAATCTGCAAAGTCCCGTGATTGCTCCTGAGCTGTGTTCTCT Gene BVT0102_043394 - 1 EMBV3_35492 GK000015.2:6947619-7021659 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058312 1 XLOC_036065 NonCoding TCONS_00058312 XLOC_036065 NonCoding NonCoding LOC787564 15:6995589-7032186 x TSS43961 1847 2 TCONS_00058312_2 66 0.644829453167298 3 0.949611979451306 1.14589391476336e-05 0.000201295130533004 4.00822983194646e-05 8.99204902578739e-06 5.34615810558935e-05 0.000123947943485515 0 3.20233412435187e-06 0.000170874581337903 0 0 0 8.59874853553986e-12 2.54683017707936e-06 0 1.09524595448271e-10 0 0 0.000500838445406228 3.54815882800167e-05 0.000128201155424563 0 0 0 0.000274958559508906 0.00023268818153728 0.000431426142655065 0 0 2.59902766391128e-25 NM_024947.3 PHC3 Homo sapiens polyhomeotic homolog 3 (Drosophila) (PHC3), mRNA. 1e-08 66.2 73.68 0.0590146182999459 0 noncoding 0 0 0 0 -0.0615765177239927 0.724260808494973 -0.0174212849904981 0.730945541861842 CCACAAAAACCAATCACTCCCACACCTCAGGGCCACTCTCACTTTCCAAGACCCTGACTGCGTGCCCAGAGTGCAAGTCTGGCTTTCGAGATGGCCCATGCTCTGTCTTTGAATGCGTATCTCCCTGAATAAAACTGCTTTTACTTCCTTAAGGCTCGCTCTTGAGTTCTTTGCTGTTCAAAGCCAAGGACCCTGACTTGGTGGCCTGATGGAGGGGCTCACCTAAGACTTGGGACACGATCATCCTTTTTTGCCTCATTTCTCCTACAACAGTAAGCCCCTACTGAAGCTTTTCTACCACAGCCCAATGAATAGCCCTCAGAGTTGTCCCCGTTTCCTCTCCTGGCTGCTAGGCAGATAACTGTTATTACATCCCAACACAATACAGCTGGGAAGTGCTGGACCTGAGGGTCTGCAAAGCAGCATCTGGTGAGAGGTACCAGCATCACCAAGAACTTCAGTGCTGGCTCCTCTCTGTAGTTTGGGGCTGGTGGTAGGACAGTGAGCACAGAATTGGGGGTGTGTTGAGCCTCAATACTGGGGTACATCCACCTAGATGTCCCCATCCCACGTTTCAGGGCTCGGACCTTAGTGTAACAGAGTGTTTAATCATCTCTGTGGCTCCCAGTTGTAAATCTGCAAAGTCCCGTGATTGCTCCTGAGCTGTGTTCTCTGCCACTGCAGGGAGATAAGGATGGCTTTGTAAGAAGTACCACCACAAGCATACACTGGCTCTCATACTTAGCCTTGAACTTCTCATTAGCTGCCTTCAGTTTCTAGTTATCCCTCTGAAGGGCTTCCATTCACTTGTAAAGACTAGCCCTTGTCTTTGCAGGCGCTGGCTCTCGTGTCTTTAAAGGCCTCATTCATTGCATAGGTAAGCTTGATTTTCTGCACTGGGTATGTTTCCTCAGGCCATCATCTGTGAAATAGTCAGCAGCTGAGACACCACCTTGTGCCAGGGACGATTTGCGGCCCACATCCCACTGAGGTTGGGGTTTTCCTTGCCGGCCAGTGAGCAATCCACTCTCTGCCCTAGAGGCTGCCTTCTCAGACCATTTGCTAGTACCAACTGTTCAGTTCAGTTCCTCTGAAAAGCAGATACTGTGACGGAGTGGAGATGTACAAGGTTTTATTAGGAGGAAACACCTGTGAAGGATAAAGTGAACAAGAGCAGGTGTTAGCTAGGAAACTTTTGACATTATGACATGGGTCTGACAACTGAAAAAGGAGAGCAGGAAGGAAGCAGCAGCTCAGAGAGTATTGACCAGGCTGGTGAGTCAGCTGTGAGGAGTCCCCGCTGGCCAGAATGGTCCTCCTCAAGTCCACTCACTATCAGTCACGACTAAGATATTTGAACATTATCATCACTTTGGAGAAATCCTGGAATACCTCAGATGCTCTGGGGATTGCATTCTCTTCCCTGCTCACAGAGGACATCTGGCTACGTCTGAAGACACTTATCATGATGGGGACATTCTATGATTTTCGAAGCCAGAGATACTGCTAAGCATGGTACAAGGCACAGGAAAGCCCCCCACAACAAATGATTATCAACCAAAAATGTCTGTAGTGACAAGGTTGAGAGACCTTGATAAATACATACATAGAAAATATTTTTATTATTGTTCACATCTAAATAGTTTGTAATTTCTATTATAGTTAATTTTTCAGAACATTGGTTTGTTTAAAAATGTTTTTCTTAATGGTTATTTTTTGTTACTCATGTTTGTGGTCAGAGGATGTGCATTACTCCAATCCTTTGAAATGTGTCAATGTGTTTTATAGTATAATATTGGTTCCTTTTAATAAATGTTCTAAGTGTGCGCTTACAAAGAATGTGTCCC TCONS_00060527 r 5' 884 TCONS_00060527 r 3' 26070 EMBV3_07729 CCCTGTTTAAATGCTCAGTGAGTAGCAGTAGCAGTCACAGCCATCCAGGCAATGTCCTGT Gene GeneID:617425|MGC148293:NM_001082462:8_cdna Constitutive 2 NULL GeneID:617425 7 GENE MGC148293 NULL similar to phospholipase inhibitor EMBV3_30278 CATGATCTCCACTTCAGAAACCATCATCGACATCAACGGGACCGTCATGAACTACAGCGG Gene GeneID:286805|ADAMTS5:NM_001166515:10_cdna Constitutive 0 NULL GeneID:286805 1 GENE ADAMTS5 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 5 EMBV3_09670 GCCCTGTTCAAGAAACATGAGGAATAGCACTTTTGGAGGTGCCTTCCCAAGAAGGGATCC Gene BVV0102_245086 + 1 EMBV3_43593 GK000016.2:53168211-53199418 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12372 AAGATCTTTGTAAGACACGTGTGTAGGAACCGTCTTCTGCTGAGTCAGTGCTTTGCAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21562 CTCCTACCAAGAACAAAGGAGAATGAGGAGAGATACACCCCGTTATCACCAAGCTACCCC Gene GeneID:100139322|LOC100139322:XM_002689745:35_cdna Constitutive 0 NULL GeneID:100139322 8 GENE LOC100139322 NULL similar to chromosome 9 open reading frame 79 EMBV3_26671 ATGGGATCAAAAGCAGAGTATGTGGGTCCTGATGCAGGTAGATTGGTGGATTCGGTGGTG Gene BVV0102_260151 + 0 NULL GK000016.2:1972609-1981478 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28759 ATAATGTTATTGGTTCCAACAGAAGCAGAGACCTCCCACCCACTGACCCCAGGCTTTGCC Gene BVT0102_279453 + 0 NULL GK000018.2:49481559-49552814 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086568 1 XLOC_052183 NonCoding TCONS_00086568 XLOC_052183 NonCoding NonCoding - 18:49501113-49503013 - TSS64391 1900 4 TCONS_00086568_4 67 0.26 1 0 0 2.64432327969029e-05 0.000132374685672572 5.36364415776317e-05 0.000111256082688254 4.49685523659772e-06 0.000202422432093423 0.000367215189203213 0.000183747185156558 5.86447402054317e-11 0 0 6.23574243147893e-05 3.21747388638437e-06 5.30276642018904e-16 0.000152909413371299 0 5.17845204097635e-17 9.77416878721925e-05 6.51698578643334e-05 4.13838855188202e-06 2.76037586288563e-14 0 0 0.000179755889943165 6.30379431265423e-05 7.59715079912756e-06 9.27265816415655e-14 1.22252182448592e-14 0 XR_231101.1 LOC101907760 PREDICTED: Bos taurus uncharacterized LOC101907760 (LOC101907760), 7e-25 120 78.05 0.0821052631578947 0 noncoding 0 0 0 0 -0.124634278267947 0.481585727556139 -0.046413744333188 0.575565188670694 GGTCTCACACACACTATCGCGATGTTTCATTGTTCCGCTGTTGCTGAGAAGCGTGCGGTTGACTCTGCGGGTTTGAGATGCCCAATCTGCCTATAGGCAGCTGTGTCCCCCCGACCCCGGCATGGCGAAAACTGACCGCAATGTCGTGCGGGCGGAGATAGGCTTTAAGAGATGGCCAGCAAGGCCTGCGGAGCCCCAGAGGGACGCTGAATGACGGACAAAGTTGGAGAAGGCCTCTGACCACAAGAGGACGCGGGTCTCTGAGAACTGCCCTGGCAGGAGAACGGCCCCTGGCCCAGCTGCCTTCCCACGACCCCAACGCAAGCCCAAGGGCTTCGGGCCTGACTTGGAGCAAGTGCAGCCTGTGTTTGGGGAAGGGGTACCCAGCGCCCCGGGCAGCCAGTTAAGAGGGTATGGCAAACCCAGCTGGGTGTTTATGGATGTGTGTACAGCAAAGGAAACAGCCCACCATAGCCGCTGGCAAACGCGTAATCCCAACGTCTTATCTGGATGCCTATACATTTATGTAAGATCTCTTTGCACCTATGGCTCTCAGTCGCCTGGCTGCAGAACTCGACTATGATAGGCCGAAAGACATGCGATATCCTATACATCAAAAGAGGAGAAGGCTGCCTTCAGAGAAACCTGCCCTTCTTTTTTGGATTCATTTAGGAGAGTCTTTTGCCAATCCTACAACTGAAACATTTTTATTGCAGCATGTGGTGTGGAATGCCGTGGACTGTAAATAGGGGGAAAGAAAGCACTTCTTTCACAGTTTGGAGGAAATGGAAGAGTGTGATCAGGAAACAGAAAATAGGTACTATTAATGTTGGATCTTCTGAAGCAAGTTTTTAGAAAAATCTTGATTGATGCAGACTCTTTTGTCTTCTTTGTGGAAAGTATCTTTTATCTTTGCCTCACTACAAAAATTGGTTTTACAAGAATAAACCTTGACTCAGCAACTTGCAAATAGCAAAGTCCATGGATATTAACCAAGTTGAGAGAAGAAAGAACCATAAGATCCAAGTTTCTAAATTTAACACCTGGGAAATTGGTGTCCCGAGTCTTCACTGGGGGTCCATGGTTCACTGCCCACATGATTTTTATTAGATCTGTTCCTCTGCTGAATTAACAGAATTTCCTAACCTTGCATGATTCAGGAAGTGAGCCAATCTGATCAAGATGCATTATTCTTTTAGTGTTCTACTGGTACTATTCATGAATAGTCTAGGATTTTTCCATCAGTATTCTTAAATGAGATTGCTATATGCGCTGTTGTGTAGTCTTTCTTGTCTTTTAAAATACGTATACTCACTTTATACAAAGAATTTTAAAGCTCCATTAATTTGTGTGTGTGTGTGTGTGCACTCTGAGATACTTTAAAATGCATTGGGGAGGTAAATAATGTTATTGGTTCCAACAGAAGCAGAGACCTCCCACCCACTGACCCCAGGCTTTGCCATTTGACAACCTGGCCAGTGAAATGTGAGCCATAGTGAGGAGTGTCACTTCTGGACAGAAATTTGGAGAGTGTGTGTAGTGCCATCATTTCTGTGTTCTGTCTTGCCACAGGAATGGCATGTCCCAAGAAGGCAAGGCTTGAATTGAGGAAGATACATGGAACAGAACCACTGCTGACCCAGAGCAGATTGTAAGTAAAACATAAATTCTGGGGACATCTGGTACAAGAAGATTCCACATGCTCTGGGGCAACTAAGCCCATAGGTCACAACTAGTGAGCCCGAGGGCATAGAGCTAGTGCTCTGCAACGGGAGAAGCCACTGCAATGAGATGCCTGTGCACCACCATGGAGAGCAGCCCCTGCTCACCACAACTAGAGAAAGCCCATGCATAGCAATGAAGACCCAGCCAAAAAATAAATAAAAGTTTTGAAAATAAT TCONS_00083752 r 5' 463 TCONS_00083752 r 5' 463 EMBV3_40589 GCGCTGCAGGAGCTGGGCGGCGGCGGCAACGCGGGATTCCGGAAGAGGACCAGTCGCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24381 GGGGTTGATGGTGGTTGAAATTGATTTCTGGCTGGTTTCTAAGGTGCCTGCTAGCCATTG Gene GeneID:532641|ZFAND3:NM_001102145:47_cdna Constitutive 3 NULL GeneID:532641 23 GENE ZFAND3 MGC155251 zinc finger, AN1-type domain 3 EMBV3_25746 CCATGTGAATAACTGAGTGCCTGAAGGGGGACTGTTGATGGGTTGCTGATGGAGATGGAA Gene BVT0102_355365 - 1 EMBV3_27351 GK000004.2:50310289-50323244 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16903 CAGTCGGGCATACACGTTGAGCACTGCCGTGATATAGTAGGGCACGTAGGAACTGGCATA Gene BVV0102_244511 + 0 NULL GK000007.2:15894246-15897381 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211997 1 XLOC_130060 Coding TCONS_00211997 XLOC_130060 Coding Coding P2RY11 7:15894541-15896884 = TSS159183 1198 1 TCONS_00211997_2 374 2 0.48932536293766 0 0 0 0 0 0 9.73574172125017e-06 4.93715294736267e-06 6.58609788371232e-06 0 0 0 0 0 1.70638367838932e-06 0 0 0 4.78860219423235e-05 0.00022810870786699 0 0 0 0 0 0 0 0 0 0 NM_001204449.1 P2RY11 Bos taurus purinergic receptor P2Y, G-protein coupled, 11 (P2RY11), 0.0 2156 99.92 0.999165275459099 NM_001198690.1 PPAN-P2RY11 Homo sapiens PPAN-P2RY11 readthrough (PPAN-P2RY11), transcript 0.0 924 78.80 0.91652754590985 TCONS_00211997_2 sp|Q96G91|P2Y11_HUMAN P2Y11_HUMAN P2Y purinoceptor 11; 4e-163 467 70.24 0.983957219251337 1 coding 0 0 0 0 0.0614872624662536 0.714436126581844 0.0407810721903818 0.461024744140763 GGCCAGCGGCTTGTGTATCAGAAGGGAGCACACCGCACAGGCCACAGTGCAGCTGCAGACCCAGAGGCAGGCCATGCAGGCCTCAGCCAGCAACAGCTCAGGTGACACGCAGTGCCCAGTCAACTTCTCGGAGGCTGCAGATAGCGTCCTCAGTGGCCTCCAAGATGACTTTCTGTGGCCCATGCTGGTAGTTGAGTTTCTGGTGGCCTTGGCCGGCAACAGCCTGGCCCTGTACCGCTTCTGCAGCCGGGAGCAGCACCTCTGGCCCCCAGCTATGATCTTCTCGGCCCAGCTGGCGGTCAGCGACCTGCTCTACGCCCTGACGCTGCCCCCCCTGGCTGCCTACATCTACCCGCCCAAGCACTGGCGCTACGGGGAGGCTGCCTGCCGCCTGGAGCGCTTCCTCTTCACCTGCAACCTGCTGGGTAGCGTCATCTTCATCACCTGCATCAGCCTCAACCGCTACATGGGCATCGTCCACCCCTTCTTCACCCACAGCCAACTGCGGCCCAAGCACGCCTGGGCTGTCAGTGCCGCTGGCTGGGTGCTAGCGGTCCTGCTCGCTGCCCCCACACTCAGTTTCTCTCACCTGAGCGAGTCCCAGCGCCCAGGCCAGTGCTCTGTGGCCAACCTGGGGGCCTGTACCAAGTGCCTGGGGACAGCAGGTGACAGCCAGCTTGAGGCCTACCGGGTCTACAGCCTGGCGCTGGCAACGCTGGGCTGTGGCCTGCCGCTACTGCTCACCCTGGCAGCCTACGGCGCCCTGGGGCGGGCCGTGCAGCACAGCCACGGCATGACGGCAGCCAACAAGCTGCAGGTGACGGTGCTGGTGGCCAGCGGCGTGGCCCTCTATGCCAGTTCCTACGTGCCCTACTATATCACGGCAGTGCTCAACGTGTATGCCCGGCTGCGCTGGCTAGCCCTCTGCCCGGGTTTTACAAGTGAGGCCGCGGCTAAGAAGGCACTGGCCCAAAGGACGTACTTGGCCCACCAGGTGACACGAGGCCTTGTGCCCCTAGCCATCTGCATCCACCCGCTACTCTACATGGCTGTGGTGCCCAGCCTGGACTGCTGCCACCAATGCTGCGGGCAGGGACAGACCCCAAAGAGCACCACGTGCTCCAGCCAAGCCCTGCCCCTCAACGTCACAGCCACCCCCCAAACCTCAGGGCTCCAGTCCCACGAGCTGAGCCCGTGA EMBV3_22788 TTCGAAATGCCAAGGAGCCTATCGTGGTCCAGGTGCTAAGGCGAACACCTCTCAGTAAAC Gene GeneID:511963|PDZRN4:XM_002687373:3_cdna Constitutive 0 NULL GeneID:511963 5 GENE PDZRN4 NULL PDZ domain containing ring finger 4 EMBV3_29368 CCTCCATATCCTCTGCTGAGTCCAGAGCCACTAAAACCATCCTTCTCCTGGTGAGCATCT Gene GeneID:100141010|BOSTAUV1R406:XM_002695262:262_cdna Constitutive 0 NULL GeneID:100141010 18 GENE BOSTAUV1R406 NULL vomeronasal 1 receptor bosTauV1R406 EMBV3_32794 TTACGTCATAAGGCCATCTATGGGACTGAACTTTGAGCTGTACTGTGGGCGGATCGCTAC Gene GeneID:404167|GCNT3:NM_205809:31_cdna Constitutive 0 NULL GeneID:404167 10 GENE GCNT3 NULL glucosaminyl (N-acetyl) transferase 3, mucin type EMBV3_13373 CCCCTAAATGGGGTAGGACACAGCATCCTTTGTTCAGTTGCCTTGGGCTTTCAAACAGAA Gene GeneID:533333|ELOVL6:NM_001102155:62_cdna Constitutive 2 NULL GeneID:533333 6 GENE ELOVL6 MGC139109 ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) EMBV3_00329 GGCTGGGCAGGGGCCTGGGATGGATTCTGAGCTGGGTCCAGCAGACATGGGGACATTAAA Gene GeneID:504370|CEND1:NM_001080222:230_cdna Constitutive 1 NULL GeneID:504370 29 GENE CEND1 MGC142863 cell cycle exit and neuronal differentiation 1 EMBV3_12189 GAACCCACTGCCTTCTGAACACACCCCGTGAACAGAGATTTATTTTTGCAGACAGACTTC Gene GeneID:616690|LOC616690:XM_002707860:2_cdna Constitutive 0 NULL GeneID:616690 Un GENE LOC616690 NULL similar to mCG56196 EMBV3_30209 GGCATCGTGCTTGAATCACCAGCCTCCGATTCTTCACAGAAAAATATTGCACTGCTAATC Variant GeneID:504404|BEND7:XM_002692078:210_cdna 679^904 1 EMBV3_07141 GeneID:504404 13 GENE BEND7 NULL BEN domain containing 7 EMBV3_22875 CTGACTTCTACTAAGCCCCACTTCTGGAGCCATAGAGGACCGTTCGCCATTCGTTCATCT Gene BVT0102_443781 + 1 EMBV3_19996 GK000025.2:9290513-9330657 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14025 CGACTTGGTAGATAGTCTTAATGGTTCAGCCTTGTGGGTTACTGTCTTTTCGGTACTGGC Gene BVT0102_123084 + 0 NULL GK000005.2:89092700-89102685 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195842 TCONS_00195839 TCONS_00195840 TCONS_00195838 TCONS_00195841 1 XLOC_118154 Coding TCONS_00195840 XLOC_118154 Coding Coding GOLT1B 5:89100698-89116337 j TSS145847 2899 1 TCONS_00195840_1 127 5 0.814937971607622 1.14111665101145e-09 0.00226906426892757 0.000118667782620886 0.00259877994876262 0.00500306528063471 0.00212988771800645 0.00368227091325961 0.00390505487369831 0.00265380615327568 0.00305255037393477 0.000728363146663683 0.000407111715465549 0.00111825620094023 0.00401764501495193 0.00116292211546638 0.00173363591633417 0.00122452875165351 1.26659707280626e-05 2.77365289649366e-06 1.6176797190661e-05 9.80115783828717e-09 0.000526287619331291 0.00168747344857395 0.00567330249173559 6.70335791432476e-07 3.54226063924154e-08 1.23902717276477e-06 0.000277872037824259 0.000392941917756837 1.83809137171195e-16 NM_001046215.2 GOLT1B Bos taurus golgi transport 1B (GOLT1B), mRNA. 0.0 1584 99.89 0.30355294929286 NM_016072.4 GOLT1B Homo sapiens golgi transport 1B (GOLT1B), mRNA. 0.0 2744 81.45 0.988961710934805 TCONS_00195840_1 sp|Q2YDE3|GOT1B_BOVIN GOT1B_BOVIN Vesicle transport protein GOT1B; 2e-80 237 100.00 0.992125984251969 1 noncoding 0 0 0 0 -0.280016278942074 0.21646925168402 -0.0172783962469361 0.726781332726212 GGGACCCTGGAGGGCTTCCTGGAGGAGCCGGAAATTGGAATGGGATTAACAGGATTTGGAGTGTTCTTCTTATTCTTTGGAATGATCCTCTTTTTTGACAAAGCACTACTGGCTATTGGAAATGTTTTATTTGTGGCTGGCTTGGCTTTTGTAATTGGTTTAGAAAGAACATTCAGATTCTTCTTCCAAAAACATAAAATGAAGGCTACAGGATTTTTCCTGGGTGGTGTGTTTGTGGTCCTGATTGGTTGGCCTTTGATAGGCATGATCTTTGAAATTTATGGATTCTTTCTCTTGTTCAGGGGCTTCTTTCCTGTGGTTGTTGGCTTTATTAGAAGAGTGCCAGTCCTTGGATCACTCTTGAACTTACCTGGAATTAGATCGTTTGTAGATAAAGTCGGAGAAAGCAACAATATGGTATAACAACCATTGAATTGAAGACTCATTTAAAATATTGTATTATTTATAAAATCCTTTGAAGAATATTCAGCACAAAATTAAATTACCTGAAATAGCTTGTAATGTTCTTTACAGAAGTTTAAAACGTATAGCCTACAAAGTACCAACAACAGTTAACAAAGAAGCGATGAAAACAGGCTTCTAACCAAGTCATCTAAGAGGTCAGCAAGCAAACCGAAGGAGGTGAAATCTATGTTACATGCATATTGAAACTTTTAAAGGCCATGTTTATTATTTTTCCACAGTGTGTGAAACACAGCCATCCTTAGAGGACTGTAATCCCTATTTCTTTCCTTCTTATGTTCAAGATGCAAGCATATCCATAGGCATTTGCTTTTTAGAAGTCTCCACTGCAATGGCAAAAATATTTCCAGTTGCACTGTGTCTCTGAAAATGATGCATGAGTTAGATTGGATTATGTTATTTTAATCTATTAAAACCAGGAAAACCCAGTGTTGATGTATGAATCCCTTTTTTTTTTCTTTTGGTAAGAATATGGTTAAAATAAAACTTTCATGGTTCTTCTGAATCTTAATATTTTAAAACCAGATGAAAATCCGACCTAGATATTCTTTGTTGTAATGTTGCAAAGGTCATTCTTTACTAGCTTACAGTTTCTAAGTTACAGCTCACTCAGCACTTTTTCCTTCAGCAACACACTCTGGAAATCCTGATATTCCTTGGGACTCTCATCTGAGCATCTGTATCTTTCATGACACATGAGCATTTAACAGAAAGCCATCTCGGCCATGAAACAGTCTGTTACAAAGCTTGTTTCACTGAATGGTGTGTTCTTTAAGATACTAAGTGATACAACCCAAGTGAGATTTTTCCATGTCATGATCCAGTTTTTCCTTTTATTTTTTTTAAATTTTAGCAGTGGTTTATTATTTTGCTTTTCATACATTGGAATAACTACTGGTAATTTTTACTTTAAGATGTAACACGTTATAAGGTTAAATTTACAGCTGTTTTTTAAAGGGCTGTTCACAGAAGCCAATTTTTCCCTTATTTTCAGCTTTTTCCTAATATAAAAATCAGTATGCATAATGTGTGTTTCATACACTCGCTCTTCATCTTGAATTCGTGGAGAGAATATCTGAGTTCACACGCAAAAGTTACTTTACCATAATTAAACTGGCTATGGTTCTGAAAAACATGACACTACAAAAATGATGTGTTGTTTTCTCCCCTGTTGCTGCTCGACGGGCAGTAGGTAGGAAGCTGGGGGTGTTTCCTCAGTAGTAGTTTTCCAGGGAGGCACCCTTTTGTAGCGGTAGGAAGCCATTTCAAGAGTCATAGTACTATTTGTTTTACTACTAATGATTGTACTATTTGCTCATTTTTTTTTTAACAGTTGCAAAGCTTTTTAATACATAAAATCATAATTGAAATTTGTGGTTTTTATTTACAAACATGTCTACAAGATACATTATTGCCTATGTTACTACTAGTTAAGTCTCTTGATGCACAGGGAAGTCCCATCCTTGCTCATCTAAAGAAAGAACGACTTGGTAGATAGTCTTAATGGTTCAGCCTTGTGGATTACTGTCTTTTCGGTACTGGCATTTGATTTATGACATAATCTGTGAACATAGATGATACTGACAAAATGAGACTCCTACCTCAATAGTTCATGGAATGGTAAGAAACCCTTTGTTGTCTAATGTTCTTCAAAAAAGTACTATCCTTACTTGGAGAGTGTCAAATACCTACATACTTGGGGGACTGACTTATATAAGTTGCCCTGTGGGACTCTGTTATACATATTTTTGACTGACCCATATTATTTACAGTGGCTAGATAAGTCTACCTTTTTTTAGAGCAAGAACAGTATCTGTTAATGTAAGGAGCATCTGTATTATTTAACTCCCTTGTAGACATGAATTTCTATCAAAATGTTCTTTGCACTGTAGCAGAGATCTCTTTTTCAACAATCTTGTTTCAGAAAACATGATTAGACAGAAGTGTATAAAAGATGTGATAATCTCCCAATAAGAATGAGAGGCTTGGAGCAGTTTTCAGTTTTATCAAATGTGAGTTTGGGACTGCTTGGCAGCATTGTATGTTTCTTAGAACCATTGATGAGGCTCTACTTTTAAACATAACTTGTTTTCTGACAGAAAACACTGTACATCATATTGTTTCTTCCTTTCCAAAATTAGTCTTCTGTCTGTGACCCAAAAAAAAAAAGCATCAGTTATTGCTATAAAGGTGGAAGAAAAGGTCTAATACTACTTAGCCTTAAGTGTTTCTGGCATTGTTCAAATCTATTTTCTGTAACAGAAACCTATTTGGAATGTTTTTCTTTTCCCCTTATACATTGTAATTCCTGGAATACTGCTGCTTTTAAAAGTCTCACAGATTATATGATCTAACAATTGAATATTGTAAATACACTTGTCTTACTTCTCAATAAAAGGGTACTTTTCTATTAATT EMBV3_18866 CAGACTGGGGCCTAGGACTTAATGTTTGAGGTTTGCTCTCTGCAAGTGTGGTAGGCCAGA Gene GeneID:534816|STIM1:NM_001035409:13_cdna Constitutive 0 NULL GeneID:534816 15 GENE STIM1 NULL stromal interaction molecule 1 EMBV3_32738 TCAGACTCTATTGGCACGGAAAGTATTGCCCACACTAAAGAAGCAGGAAGGTGAAACGGG Gene BVT0102_169046 + 0 NULL GK000023.2:40606540-40609759 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133436 TCONS_00133442 TCONS_00133425 TCONS_00133432 TCONS_00133444 TCONS_00133428 1 XLOC_081110 Coding TCONS_00133442 XLOC_081110 Coding Coding ATXN1 23:40423226-40614099 j TSS99656 9839 1 TCONS_00133442_3 846 0.018192905783108 5 0.948478561549101 0.000821752290298455 0.000395462316820071 0.000703163906591557 0.000541554548908752 4.20745302411642e-08 9.00668516875392e-11 0.000185628759943877 0.000557298299972484 0.000671416494447047 0.000188027381828444 5.28173405728653e-05 4.29383208780937e-05 1.58150792050857e-08 1.5785113704814e-14 0.000268427148135573 3.34201822510802e-11 8.52692661772862e-80 8.66292382389869e-06 0.000106240660862857 0.000370437284681495 0.000698300232548119 4.95787910234093e-66 4.44082461787242e-11 3.11534917889814e-12 0.000334820419859927 4.33323305489884e-06 0.0006126949071914 5.11349293349027e-06 1.38704588671704e-09 3.63257930679708e-16 XM_002697578.2 ATXN1 PREDICTED: Bos taurus ataxin 1 (ATXN1), transcript variant X1, 0.0 6307 100.00 0.35532066266897 XM_005249287.1 ATXN1 PREDICTED: Homo sapiens ataxin 1 (ATXN1), transcript variant X1, 0.0 5835 81.90 0.607582071348714 TCONS_00133442_3 sp|P54254|ATX1_MOUSE ATX1_MOUSE Ataxin-1; 0.0 1279 81.40 0.962174940898345 2 coding 1 1 1 1 0.0120938621461581 0.948262483501641 0.0113862893831301 0.852895699117488 GTGAGGAGTGCGGCCATGTCCGTGTGTTGCTCATCGTCTGTTGCACACGGGGATTTGTCTCTCCAAGGCCTCGGTGGAGGACCCCCTGTCCAGATGTCTCTGTCGCTGTCTCTGGGCTCTTCCTCTCATCTCGAGCCTGGGCAACTACAAGCCTTGAAGACCCGCGGGGTGCGGCCCCACGACACTCCTTTTTCAAAGGTTCACTCCTCTGGAGATAAAGGAATCATGCACATGATTATTTTCTTCATATTAATTGTTCAGAGCTCCGTCTTTAAAATTCTCGTACTCAGCCAAGCGGTGGGAGGTCCACGGTCTTCAGAAATTAGCTGCGTGCCTATTTTCCAAAGAAATTAGTCCGTTTTCTGGGTGGAGAGAGACCAGACTGCTATTTTCACAGGATTCCAGAGCAGCTGCTGGAGGATCGCACCCACGGGGAGATGATTCCTCATGAAGAGCCTGGATCCCCTACAGAAATCAAATGTGACTTTCCGTTTATCAGACTAAAACCAGAGCCAGTCCGACAGTGAGACGGTCACCGTGGAGGGGGGACGGCGAAAAATGAAATCCAACCAAGAGCGCAGCAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGCCGTCCTCGGAGGACAAGGCGGTGCCCAGCGACAACCACCGCGCGGAGAACGCGGCATGGCTCCCCGGCGCCCGGGGCCACGTGGGCGGGCGGCTGGGGCCAGCGGGGCCCCCGGCGGAGCTCGCAGCGGAGCTCGGTTTACAGCAGGGAATAGGTTTACACAAAGCGCTGTCCACGGGGCTGGACTACTCCCCGCCCAGCGCGCCCCGGTCCGTCCCGGCGGTGACGTCCACCACGACGATGCCCGCGGCGTACCCGCCGCCCCCTCCGTCCGGGGCCCCAGTATCCCCGGTGCAGTACGCCCACCTGCCGCACACGTTACAGTTCATCGGGTCTTCCCAGTACAGTGGGCCCTACGCCGGCTTCATCCCTTCCCAGCTGATCTCGCCCACAGCCAGCCCGGTCACCAGCGCGGTGGCCTCGGCGGTGGGCGCCGCCACGCCCGCTCAGCGCTCCCAGCTGGAGGCCTATAGCAGCCTGCTGGCCGACATGGGCGGGCTGAGCCGAGCCTCCGGACACAAGGCTGAGCCACCGCCACCGCCGCCACCGCCGCAGCACCTAGGACGGACAGCAGGGCTCCTCCCCCCGGGGTCCCCACCGCACCCCCAGCAGAGCCAGTACGTGCGCATCTCCAGCTCGCCGCAGAACGCCGCACGCCCGGCCTCGCCGCCGACCCTCCCCGTCCACCTGCACACGCACCCGACCATGATCCCACACACGCTCACCCTGGGGCCCTCCCCGCAGGTGGTCGTGCAGTACACCGACTCCAGCAGCCACTTTGTCACCCGTGAGGCCACCAAGAAGGCCGAGAGCAGCCGGCTGCAGCAGGCCATGCAGGCCAAGGAGATGCTGAACGGGGAGGTGGAGAAGGGCCGCCGGTACGGGGCGCCCCCCGCGGCCGACCTGGGCTTGGTGAAGGCGGCCAGCAAGGCGGTGCCCCACCCGTACGAGTCCAGGCACGTGGTGGTCCACCCCGGCCCCGCTGACTACAGCGTCCGCGACGCGTCGGGGGTGCGGGCCTCCGTGATGGTCCTGCCCAACAGCAGCACCCCCGCCGCTGACCTCGAGGGGCAGCAGGTCACCCACCGGGAGAACTCGCCGTCCGCCCTCAACGACAAGAGTGGCCTGCACTTGGGGAAGCCCGGGCACCGCTCCTATGCACTGTCCCCGCAGCAGGTGCTGGGCCCCGAAGGTGTGAAGGCCGTCGCCACGCTGTCCCCGCACACGGTCATCCAGACCACACACAGCGCCTCTGAGGCCCTCCCCGTCGGGCTGCCGGCCACGGCCTTCTACGCGGGCACGCAGCCGCCGGTCATCGGCTACCTGAGCGGCCAGCAGCAAGCGATCACCTACGCCGGCGGCCTGCCCCCGCACCTGGTCATCCCGGGCACCCAGCCCCTGCTCATCCCCGTGGGCAGCGCTGACCTGGAGGGGTCGGGCGCCGCCTCGGCCATCGTCACATCGTCGCCCCAGTTTGCTGCAGTGCCTCACACGTTCGTCACCACCGCCCTGCCCAAGAGCGAGAACTTCGGCCCCGAGGCCCTGGTCACCCAGGCCGCCTACCCGGCCATGGTGCAGGCCCAGATCCACTTGCCCGTGGCGCAGTCTGTGGCCTCCCCCGCCGCCGCCGCGCCCCCTACGCTGCCGCCCTACTTCATGAAAGGCTCCATCATCCAGTTGGCCAACGGGGAGCTGAAGAAAGTGGAGGACCTGAAGACGGAGGACTTCATCCAGAGCGCGGAGATCAGCACTGACCTGAAGATCGACTCCAGCACGGTGGAGAGGATCGCAGACAGCCACAGCCCCGGCGTCGCCGTGATCCAGTTTGCCGTCGGGGATCACCGAGCGCAGGTCAGCGTGGAAGTTTTGGTAGAGTATCCTTTTTTTGTGTTTGGACAGGGCTGGTCATCCTGTTGCCCGGAGAGGACCAGCCAGCTCTTTGATTTGCCGTGTTCCAAACTCTCCGTCGGGGACGTCTGTATCTCGCTCACCCTCAAGAACCTGAAGAACGGCTCTGTTAAAAAGGGCCAGCCCGTGGATCCGGCCAGCGTCCTGCTGAAGCACTCAAAGGCCGACGGCCTCGCGGGCAGTAGACACAGGTATGCCGAGCAGGAAAACGGGATCAGTCAGGGAAGCGCCCAGATGCTCTCTGAGAACGGCGAACTGAAGTTTCCCGAAAAAATAGGATTGCCGGCCACGCCCTTGCTCACCAAAATAGAACCCAGCAAGCCCGCGGCCACGAGGAAGAGGAGGTGGTCAGCGCCCGAGACCCGCAAACTGGAGAAGTCGGAAGACGAGCCACCTTTGACTCTTCCCAAGCCTTCTCTCATTTCTCAGGAGGTTAAGATTTGCATCGAAGGCCGCTCTAACGTAGCTCTGCAGAGTTTCTCACGGAGCAAGATGCTGAAAGTTTCAAAGTGGTTTCAAGGGATGAATGTGAATTATGAACTTGTATGTGACAATGAATGACCACCAAGTACAGCCTGACAGGAGGCACTCTTCACTTTGATGTCTCTGAAAGGATTTAAAAAGCATATGCAGAGCTGGCAGAGGAACTGAGAGGGAAGGGATGGGGAAAAAAAAAAAAAAAGAATACTCACTTTTGTCCAGTGTTTTTCTTTTTAAGATGAACTTTTAAAGAACCTTGCGATTTGCACATCTTGAGTTTATAAATTTGTGTGATATTCCTGCAGTTTTTATCAAATAACATTGTGGGAAAGGCTTGGGGGACTGAACGAGCATAAATAAATGTAGCAAAATTACTTTCTAACCTGCCTAAACTCTAGGCCTTTTATAAGGTTATGTTCCTTTCAAGATTCATTTTTGGTCTTCTTACCGTATCTGTCACATAAAACCAGGTCTTAGCAGGACAAGTCTGAGAATTTTCTTCAGATTCATTGAGAGAGTTTTCCATGAAGACATTTATATATGTGAGCAAGTTTGTTTTTTTTTTAAGAAAACAATTATTATTGTTGTTATTAATGTTATTTTCAAAATGACTTTCTTTTTCCATCTGAAATCAAGATTTAATGTTTGGTACAAACCCAGATAGGGTCTTTCACAGTTGAGACCTTTTATCCCCAGAGATCTGAAAAATTGTTTGTGGGTTTTGAGTGTGCGTTTTAAGTGCTTAAAAGTTTTATAAGGAGAGAGAAATTTTTAAATATTCTTACTTGGAATGGCTGCAAAGAATCTGAACAAATACCTGATTTTTCTTTTACCATTGAAAATAGTACTTTTTCCATTTCACAGATTAAAAAAAAATTCTCGTCAGCCCACATTCTGGCTTTCCAGTATTCCTTCACATTTAGCTCTCAGCAGAACTGATGATTTTTAGAAACCATTTCTGGGGTGTACCAAAAACATTGGAGTAGGTTTTGAACTGCTAGATCAGTCCTTGACTTTCTTCGGTGTTCATTACCCTCTCAGCATGCTAGCAGAGAGCTGGGTGAGTCCATTCTTGCAGTCATATTGCTTATTTAGTGCTGTATTTTTTTAAACGTCTCTGTTCAGAGAACTTGCTTAATCTTCCATATATTCTGCTCAGGGCACTTGCAATTATTAGGTTTTGTTTTTCTTTTTTTGTTTTGACGGTAAGAGGAATAAGGGGCTGCCATACAGACTTTGTCCTCCTCAGTCCCATTCACGTGGACTCAGAGAAACACCCACCACCTTTTGGCTTCTTTTGAGTATTGAACTAACCGGATCCACACCTCCAACACTAAAACGGGAAAACATGCGTGGTTTGGAGCAATAGGAACATCATCATTGTTTTTCGTGCTTTTGTTTCAGGTATAGGAATTATCAAAGAGTCGGTTCTTTCTAAACATTGTCCCGTTTCACCTTCCTGCTTCTTTAGTGTGGGCAATACTTTCCGTGCCAATAGAGTCTGATCAGTGTGCTCTAGAGAAAGTGTAGGTAGGCCCCTCTTGGCTTTTTCCTTATTTTCTCCATCCTTTTCCTGTGCCGGCCGGCCGGAGAAGGGCTGGAAGGAAGGAGCCAGGAAGGGGAGAGCCTCCTGCTGGGCGATTGCCCTGCTCCGGGAAGCCGAGGCCCCGGGGCAGGGAACTTTCGGAGGAGCCCCGCGTTTCCCTTGCCCTGGTGCAGGAAAGAGCAAACAAAGGAGATCGTCCCCTCCTCTCCGCGAGGAATAGTGGCGCGCAGACGGGAAGCAGGCAGACTCATTTCTAAGGCGCACTCTGGGGCAATCGAGCCAGGATCAGCCCCTGTTCCACCGTCCTTTCCTCAAGTAGGTGGGCCCCCACCCGCTCAGGTCTGTATCCTGGAGACTTGGAGCCCTGCCTCCTCCGAGCGTGGGCAGGAAGCGTGGTCCACCGCGTGCGCGCCTTCCGAGCCTCGGGTGCAGGCGGCTGCGGAGGGGCCGGGCCTCCTGCGGACAATGGCCACCGCTCCTCTGTGGCAGCTCTCGCCTCCAAATAGGAAGGCCATCTGGAGGACAGGGGCCCTCCTCTCGTTGGCACACGTGGGCGAGTGCCGAGGCCCCCAGAGCAGCCCGGTCACCGCACCCGCGTAGCCCACCTAACAGTGCCGGGCGTAGAAACTCCGGCGCCGCGCAGCTTGCGAGGAGCAGCCATGTGCCTCTGTGCCGTGCCCACTTTGCAATATTTACCTAACCCATCTTTTGTTCTTCTTACCCGTTTTCCATTTTTAAAGTAGTAACAGCAGGCCTTTTGCGTTTACAGTGGAACACAATCACAAAGAAATTAGTCAGGGAGAAAAGAAAAAAAAATTCACCAACAAACAAGGACCTCTCTTTCTAGGGATTTCTAAATCTATAAAATGACTGTTCCTTAGGATGTTTCAACTTCAGAATTATTTCAGTTTGGGCCACATTGGGGGCGGGGCGGGACGGCTAGAGAGATGGATACCACTTACCTCAAATCTTTTCAAGTGGAAATCCAAAATTGCTTTTTCATTTGGACGTTCAGGATGATTTTCTATGTCGGTCAATTTTGTGTCTTTTCCAACTCACCCCCATTTGTTTTGGGAGGAATTTCTTCTTTTTTTTCCCATTGCTGTCCTCAATCCCATCTCACCCTGAATCATGACCCTCTGTGTGTTCGGTTAGGTGAGCGCTTCGGGTTTTCTCGCCCACCGGGAAATGGCAGCACCCCCTCCTCCTCCCCCCCAAGGAACTCTGCAGAACCTTTCACACCTCTAACTCAGGGACGGGGCTGGCGTGTGTGTGGTACACTGACGTGTCCAGAAGCAGCACTTTGACTGTTCTGGGAGTAGGGTTGTACAACTTCAAGGAATGTTTGGATTTCCTGCATCTTGTGGATTTCTCCTTAGATACCGCATAGATTGCAATATAATGCTGCATGTTCAAGACGAACAGTAGCTCCTAGAAATCATAAAATCCACTCTTTGCACATAGTTCGATCTTTACTGAAATACATTGCCAAAATTTACTTTTGTTGTATAGCTTTGGAATTTTTTTTTTTTTAAGGAAACAATTGACAATACTGTTTAACATCTGTGACTACTAAGGAAGCCTGTTTGTTTCATAGAGGAAAAAAAAAGTCTCAAATGCTTTTGAAGACACTAAATGCCATGCTATTTCAGATCTGGGTGAAGAAGCAGAGCTCTGGGGATGGAAGGCCGGGCTTTTTGAGCTGTGTTGGTTGTCATGGCTACTGTTTGATGAACTGTAAGCAGCTCGACAAACCGTGGTCCGTTTCCTCCTAAAACCCTTTGCACATCCTATCTCCTAGTCACCCATGATAATCCCAGGTGAAAAAAGGGCCAGCAGTCTCCATGGTCCAATCCCGCTTCTTCAGGGTGATGTGAAAGCAAAGGAAATGACGCTGTGTGGGCTTTTCAAGCGAAGCGGAAGTCTCTGCTTCCACCTTTGTTTTCAACCCAGAATTTCTGAAATAGAAAATTTAAGAACACATCTAGTAATAACTATACAGAGAACATACTTGGCTATAAAGCACATGCCTATCTATGCCATTGTGTTAGGTTGGTTTCCTCTTTTTTTCCTCCACGGACAGTGTTGTGTTTCTGTTGATAGGGAAACTCCAAACTGTTTGCACACCTCTACTCCGGAGCTAAGATTTCTTTTACATAGATGACCTCGCTTCAAATAAGTTACCTTACTGATAGATCTTTTCTTGTAGCACTATACCTTGTGGGAAATTTTTTTTTTTTAATGTACACCTAATTTGAGAAGCTGAAGAAAAAAAAAACTTTGAAGCACTCACTTTGAGGAGTACAGGTAATGTTTTACAAAATTGCACAAAAGAAAAATGAATGTCAAAATGATTCATTCAGTGTTTGAAAGATATGGATCTGTTGAAACAATGAGTTTCATACCTTGTTTGTAAAAAAAAAAAAAAAAAGCATAAAGGTTGAAAGTTACATGTTTTTTTGTATATAGAAATATGTCATGTCTAAATGATCAGATTTGTATGGTTATGGCCTGAAAGATTACTACTTAAAAGGCTCTTCAACTATACCTATGCTTCCTCTAGGTTTTTGTTACATAGAACCCTCTTCTGAGGGAGACTAATTCTGTATTTTGCAATTAGAGAATACTGTTCATTCCTATGCCGAAAGTACTTCTCCGAGCTCCCTTCTTAGTTTAAACTCTTAAGCCATTGCAACTCCTTTTTCTCCAGAGATGATGTTTGACATTTTCAGCACTTCCTGTTCCAGTAAACCCAAAGAATATAATTCTGAACAAGAAGTGTTTGTAACAAGGGATCCTGGCTACCAAGAAAACGGGGCTCATCACGAGGACACACACACACACAAATGTTCAGCCTTCTCTGCCCCCCGACACCTCATTTCAATGGCGGGGGGTGGGGGGTTAAACAAGAATTTTAGTTGAGATGCCTCATTTCACTTTGGTTTGTTTTTTTTTCTTTCTTTACCATTAAGAGGCCAAAATTAACGTGGAGCAACTTCTCAGAAGTCATATTCTGTCCAGAAATCAAGCCAGCAGAAACTGGACAGCTGGCAGGGGAGGGGCAGGATGTTGGGCAGATCCCCCCTCCAGTTCTTAAAATTCAGAATCTGAGCCCCTCCCTACATTACACGCAATGTTTCTGGTAGCTGACATTCACCTGTACGACGGCGGGAGGGAACAGCGGCTTCAGTTCTCGCGTCCTCACGACTTGCATACAAATGGTTCAGCTGTATTAAAATTAAGTGCTTTTGGCCAATAGGTGGTAGCTCTCCAGTAACCGTCTCTTAAGAATTTCCGTCACTTTTCTCAGCTGAAAGGACTCCAGTCTTCCACTGCAGATAATTGGAGACTTCACCCAAGTTTTCTTTCCCTTTAGTTTGTTCGTTTGCTGTCTGGGACGGCCGATGAGCCAGTCTCCTTTTCCATGGCCAGTCTGAAGGCCCCCTTTGGAAGTGCTGTTTGCAGTCATCCTTGCCGAGGTAACAGGAACTGTCCTCTGGAATAAATGGCAAGTCTGAACAGTTACCAAGCTGGGTGTGTAGGTTTCCTCTGGTTCCTAACACGAACCGCCTACTCTTCAATTAATCCAGTTCAGGAGTGGGGTGAATTTCTTTATTGTCAGTGAACATTAAACTTGATACCTGTGTACATCAGTTCTGTGAATTTGGCCTTTTAGGGGAGGTTTTTTTTTTTCCTCCTCAGCCTTCACTGCTCCCTGTACACCCAAATTAGTGTCAGCTGAAAGGCTCCAGCAGAGCCCTGCCAGCATTTTCTGGTGGCCTTTGGTTAAGACAAGAGTCCTAATTTCTAGCCAGTGGGGTCCTGGCCCCAGGGCCATCTCTGAGAATCACACCGAATGTGTTTTTCTAATATCAGCTCATGACCTACCAACCTTCCAATCGTACGCCTCCCACCGGCCAAGGAAAAAGAGACACCAGAACTTTGAGGGCACTATCAGACTGACATGGCCAGTACAGAGGAGAACTAGGGAAGGGATGATGATTTGCACCTTATTGAAAAGAAAAACTTAAGTGCATACATAGTTAAGAGCTTTTATTGTGACAGGAGAACTTTTTTCCATATGCGTGCATACTCTCTGTAATTCCAGTGTAAAATATTGTACTTGCACTAGCTTTTTTAAAACAAATATTAAAAAAAAAATGGAAGAATTCCTATTCTATTTTCTAATCGTGGTGTGTCTATTTGTAGGATACACTCGAGTCTGTTTATTGAATTTTATGGTCCCTTTCTTTGATGGTGCTTGCAGGTTTTCTAGGTAGAAATTATTTCATTATTATAATAAAACAATGTTTGATTCAAAATTTGAACAAAATTGTTTTAAATAAATTGTCTGTAAACCAGTACAAGTTTATTGTTTCAGTATACTCGTACTAATAAAATAACCGTGCCAATTGCAAACGTGTCTGTGCCTTGTGTCAGGTCCTTGGAAACCAGGGAGGCTGAGGAAGTGGTGGGCCTTCTTCTTGATCCGCTGTGATCGCTGGGTAGGTTTGTGGTGGCAAAGGTGACATAAGGCTTTGCCTTTCTTACTAATTTTGGGGAGTGGTAAGTGGGTCGGTTGTGCTTGAGATGAGAATCAGATAAAAGTCAGGTTTCAACATCTGATGTTTCAGCTCATTCCATTTGTTTCTCCTCTCTGCACACTGCTGTTTTTACAAGAGATTTTTCTTCTCAACAGAATTTGGCATCTTTGTAGGCTTGTAGCATTATCGATATGTTTCTGTAAGCTTTGCTGCACACTGGTTAATGGTGTGAAGGTGGAAAGTTCATTTGTGTTTCTTGGAGTTCATACCTGTTAGAAACTCAGAGGTTTGCACGGTGTCCGCTCTCAGATGGAGGAGACTTGGCAGTTGCCCCAGAAAGGAATTCCTCCAGGACCCAGTCAGGTAAGGCCCTCTACCTGCATCTGCACGCGTGGCTGACCAATCCTTCCAGGCTCCAGCTTCTGCAGTGCTGGAAGAGAACTCTTGGCATCCAATTCAGCGTTGTTGCTCACCCCAGGCAGGGACGGGTATCTCTTTTCCTGTTAGTCGTCTTGTTTCGGTGTATAGGGACATCTCACCAGGACTCTGCTGTTAGGCCTGCGGCATCGAGGTCCTGTTGTACTAAGAATGCTAGTGTGAACGAATGTTGGTGTGTAAATTAGCAGTGATGCACTGAGCCTTGAAACCCAGACAACGAGGCTGTTCAAGCCCTCATCCTCCAGAACAGTCTGGGCAGACGTGGGCCGCTCTGATGCAGCAGTCTGGACTAC EMBV3_22695 GGCGCCCTGTTCCTGCTGTACCTGCTCTGCAGGCGTCGGCCCGAGGCGGTGACGGTGTGA Gene GeneID:615733|GIMAP1:XM_002687040:132_cdna Constitutive 0 NULL GeneID:615733 4 GENE GIMAP1 NULL GTPase, IMAP family member 1 EMBV3_36814 CTCAGCCAGAAGCTATCTCAGAAACAAGAGAACATGGGAATTCTCCCCAGAACAGCAGAG Gene GeneID:100140251|BEND2:XM_002700381:43_cdna Constitutive 0 NULL GeneID:100140251 X GENE BEND2 NULL BEN domain containing 2 EMBV3_27348 TCTCCCAAATTCAGTCGGTTTAAGCATGGGCATCTCAGGGCTTGGCGGGAGGTGTATGTT Gene BVV0102_110339 + 0 NULL GK000014.2:15332382-15341792 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08787 CAGACAATGAGTGATGTGCTTATCAGCTGTACAACCTGCCATAGTGAATTTCCATCCCGG Gene GeneID:509302|DNAJC21:XM_002696382:107_cdna Constitutive 0 NULL GeneID:509302 20 GENE DNAJC21 NULL DnaJ (Hsp40) homolog, subfamily C, member 21 EMBV3_13106 AGCTGCTGTCCCCCTCATAAACCGTTCAACTCTACAGAAGGAACTTAGACTGTGATCCCT Gene GeneID:530692|UNC13B:XM_002689676:87_cdna Constitutive 0 NULL GeneID:530692 8 GENE UNC13B NULL unc-13 homolog B (C. elegans) EMBV3_14213 GCACTGGGAGATCCTAGGCCACAGAATAGCAGGTGAGAAAAGGCTCGAAGTGGAGTGAAA Gene GeneID:613682|YPEL4:NM_001079784:25_cdna Constitutive 0 NULL GeneID:613682 15 GENE YPEL4 NULL yippee-like 4 EMBV3_04477 GATCACCGCCTATGTGATCGTACTGGCCTTGCACATAAATGGCTTCCAGATTGACCTGAC Gene GeneID:511587|POLR1E:NM_001034408:4_cdna Constitutive 0 NULL GeneID:511587 8 GENE POLR1E MGC128728 polymerase (RNA) I polypeptide E, 53kDa EMBV3_11465 TGTGAAGGAGCCCATGGAGTTGGTGGGAAAGGTGCCACATCCCAGAGAGACAGAGCTAAA Gene GeneID:532114|LOC532114:XM_002684879:90_cdna Constitutive 0 NULL GeneID:532114 1 GENE LOC532114 NULL similar to 5-hydroxytryptamine receptor 3C precursor (Serotonin receptor 3C) (5-HT3C) EMBV3_35080 TGGGACAGCCACTTTGGGAGCTAGTGTGGTAGTTTCCCCTTAAGGTTAACATAGATTCAC Gene BVV0102_316684 + 0 NULL GK000006.2:111406681-113469759 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17764 TGAGATTCTTGGGGACGAATCAGCTGCCTGGTGAACAGAGCCTGAAGGAGACACCATGTT Gene GeneID:768234|CSNK1E:NM_001078109:121_cdna Constitutive 0 NULL GeneID:768234 5 GENE CSNK1E MGC143296 casein kinase 1, epsilon EMBV3_28317 GAAGCTTTAAAAGAACAATTCAGGGGATGTTGACAATAACTGCTACTCTGTCAGTCATGG Gene BVV0102_249414 + 0 NULL GK000007.2:47917817-47943419 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213303 TCONS_00213302 1 XLOC_130423 Coding TCONS_00213302 XLOC_130423 Coding Coding C7H5orf24 7:47910447-47920549 = TSS159828 4814 1 TCONS_00213302_1 188 2 0.523611523611524 3.17234979715041e-05 0.00010426862711103 0.000317784110154635 8.06016205559709e-05 8.16313159171967e-05 5.22236536343372e-05 6.08299341297013e-05 0.000221278300972402 0.000276019632494139 9.42907958817866e-05 6.57196447645803e-05 2.99857422083854e-05 8.24867780770658e-06 4.57146855526115e-05 9.22444754040409e-05 0.000233218415058917 0.000183570703474535 0.0004921645244505 0.000361449302072099 8.97435332740434e-05 8.87363481758509e-05 0.00018721722462301 4.12552212275804e-05 0.000562907283810655 0.000247688562864617 0.000104666252039324 3.3028584162442e-05 7.0180310547501e-05 7.86791561921444e-05 1.34480696042161e-05 NM_001076110.1 C7H5orf24 Bos taurus chromosome 7 open reading frame, human C5orf24 (C7H5orf24), mRNA. 0.0 3615 99.85 0.417947652679684 NM_152409.3 C5orf24 Homo sapiens chromosome 5 open reading frame 24 (C5orf24), 0.0 3065 82.46 0.628375571250519 TCONS_00213302_1 sp|Q0II29|CE024_BOVIN CE024_BOVIN UPF0461 protein C5orf24 homolog; 5e-138 388 100.00 0.99468085106383 0 coding 0 0 0 0 0.0390864274993726 0.786312953564843 -0.00238147399303362 0.968622793495877 GCGTGTGCGTGCGCGGTACTCGCGAGCTCGCGCACGCCGCACCTCGCTCTACGGGGCTGTGGTGGCCTCTTCCTCCTGCGTCCGGGGCAGGTCTGTGAGCGGTGGCTGCGGTGGGAGCTGGAAACCAGCGTCCACTTCGCCGCCAACGCCCTCCCTGCTTTTCCGTCCGTCTCGGGCTCTCAGCGCAGTATAGAGGCGTCGGGCTGGGAAAGGAGCGGCGCCAGCGTGAGGTTTCCAGCCGATGGGCAGCCCCTGGGCACGCTGAGGGGCCGAGCTAGTAGCGGCTGAGAAAATGATGCATCCTGTTGCCAGCAGTAATCCAGCTTTTTGTGGGCCTGGCAAACCTTCCTGCCTCAATGAAGATGCCATGAGAGCTGCTGATCAGTTTGACATATATTCCTCCCAGCAAAACAAATACAGCCACACAGTCAGCCACAAACCAATGGTTTGTCAGAGGCAAGACCCATTAAATGAAACACACTTGCAGACTGCAGGTGGCAGAAGCATAGAGATAAAAGATGAACTAAAGAAAAAGAAAAATCTCAACCGATCTGGTAAGCGTGGCCGGCCTTCAGGAACCACCAAATCAGCAGGATACCGGACCAGCACAGGCAGACCCCTGGGAACCACCAAAGCGGCTGGATTTAAAACAAGTCCAGGCAGGCCTTTGGGTACAACTAAAGCTGCAGGATACAAAGTCAGCCCAGGGAGACCTCCAGGTAGCATTAAAGCTCTATCCCGTCTTGCTGATCTTGGCTATGGCTGTGGGACTGCTGCTTTTCCTTACCCTATGATACATGGTAGAGCTGTTCATGGGGTGGAGGAAACCAGCAGCGAAATCAAGCCACCCAATGAGTGAATGAGGCAGGAAAGGAGGGCCAGGTTTAGAAGGAAGATTGTGGATAATCCCAAAGCTTCTTGGTTTTATTTCGACATACATGATATGGCCTGGGCTTTCCAAATTTGTTTTCCCATTTGATTTTTTTTTTTTTTTTTCCTGCTTTTGCTCAGAAACTGTCATATGCTGACGGATGCACTCAAGGCATAAGCAGTGGCTTTGTATTTGTACATAGGTTCAAGTGTAACACCTATCTAAATCGTTTTTGCTTTTCCTTTAGAGTTAATGGTTGTATCTCATTTTATTACTATTTTTTTGTCATTCTAAATGCTTTATGTGCTACATAATTGAAACCATTATACCTGTTAGTTTGTGAAGTTAGCTTACAATATAATAAAGATAATATCTAAGGTATTTTTAACTGATGGAACAAAGCAAACTAATGATTCAGGATTACTTGAGGTAGTGGCTGGAGGGTATTTTTTGGTAACATTTATGTTCATGAGACAGGACACAGATATATGCTTTGGCATTTACATAGACTTCATATGTTAAAAATCTTATTTTTAATGTTCTAGGTTTAAACAGTTTCTTATTTATTGATCTACATGGCATTAATTGATTTAACCATTATTCCTTTAAAAGTTCTTTAGCATTTGCCTTTCAGCCATGTTTAGGTTGTGTATTTTTTAATTGCCTAAGAGCATGTATACCAAACACTACAAACAATTCATATTTACAAAAAAATTAAACTTTTTAATAAAAACTGCACATTACATTTTTGGTGAAATATAATGCATTCTGAGAATAGCATATTTAATATAATAGAAAAAGAAATATTCTTAAGGTCTGCATGTTGCTATAGTTAATACATTTTGCCTTTTATATACTTAGTTATAAAGCATTATGCTTAAAACACTGTTTAATAATGTTCATTTATTAAAAAATATTTTTTAATTGTTTCTGATAAATTGTCCCATTGCATTAGCACTTACTGTGGTTTCAGGTCTATATCTACCAAAGGACAAAGATTGAATGGTAGACTGTAAAACTGGTACAAACAAGATGCAGTTTTCTGACTGTCAGAACCCAAATATTAAGAAATAGGAATCCGTCTATGCATGAAACATGTAAGAAATATGTTGATTAGTTTAATTAAAAATCTCATCGTAGCTCTAATGAGACCACTTCATCCAAAATAAATTTTTTCCAACAGATTTTGCTTTAGAAGCAAGATAGGAAAGAAAAAAAACATTGGGCAAACATGTATAGAAGGGACAGAGGGATATCTCTAGTCCCTCTTTTTGAAAGCAGTCTTCGTTAATATACATTTTTATTTATTCTGAGTTTGATCTAAATAAAATAGATTATTATAAACTTTGGATTTGAAAAAAAAAAATTCCACTGAATTTTAAAGTTACTGTGTATGTATTTGTGAGCTTAAATGCCTTTGAAATTATAATGTAGGTTTGCAGGACCCCCAGATTTTTAATCTTTGAAAATTAAAATTTTCAAAGGGCGCATATTATGTTGCTTGGGTTTGCTCTCAGTTAATGCAAACTCTGGTTGCAAATGGATGTCATGTTTCATAACTTTTTTATCAGGAAAAAAGCAGCAAGCCTTCAGGTGTTCCAGTGATGCCTGACACAAAGAGCTGGACTTTATGCTGCTCTTTACAGTAAGAGGTTGCATTTTATGTGGGGACTGTGTACGCACTGGCTTCTAAGACAGTGACCTCAACAATTTTAGCTTTGCACAAACCATAGAGAGCAATGTTGGATGACTGCATAATTAGTTGTAACATTCTGGCAGCTAAATTGCTATAACAGTTTCTTCTTGCAGAAGCTTAAAATACAAAACTTTTAATATAAATCTACTTAGAACAGTATAATTTCTGACACACACAGATGCTTACATCTCTATTCATGTGTTCATCCATCCACTTTTTTTTTTTTATCCATCCACTTTTATCATGTATTTGTCATTCAGTTGTTTCTGAAGGTGATGTTTAGCAGTTGGCTGCTTAGAAGTCCTCGTTTGAATTCCTGAAAGCAGTTGTTTAATTTCATGTTCTCCCACAGAATTATATATATCATAGTCAAGGGTTTGGTTGTGATTGTGTTTCATAGTGTGCCCATTTGATGTTTCCCTTTCAGTTTTGTTTTCTGATTTTGTTAAACATGCCCTTTCTCGCCGCATTTTCCTATACTTGTTCCCCTCCCGTTTCTCCATCCTCCAGCACATCTACTCAGTGGTGCTGTGCTGTGTGTCAGAAGATAAAGCAGATGTATTATTGTATGATGAATCTTATATACAAGTTAATGAAATGGAGAGATCAACTAAAGGAAGTTATGTCCATAACAGTGTTTTATTAATATCAGGAGCTATGTTCCAGGAAAAAAAGTGATTGGATAACCCCATTTAGAAAGCTGAATTTTCTGTTTTATGAGAAGTTACCTGGAGTATTAGATCTGTATGCTGAGGAGCATCTTCTTATTCTATTTCCTTTTCTCCTTGTGAACAGTTTATTGGTGCCATGTTGAAGAGAAAGACATCTAAGTGATAACATGAATAAAGTCTTAACATAGAAAATATTTTTACTTCTCTACAAAGACTATGTTGTGAATCTTTTGACACTGTCTCTTGTCATGATAAACACTGAAATAGCATGTTAAACAATTCCTTATACTTTAATATAATCATTTGGGGAAAACTGGCTTTTCCCCCCCACTGTATACTTGTTCCTTGAAAGGTAAATTGCTAATTTTATATTGTGTAATTCTGTTCTTCACAAAATAGGTTTCACTATTCTATATTTAAACTGTTGGTCAGAAAATGATCTGCTATTCAAGTAAGTTTGCTTTACTTTTTTCTTTAAAAAATATTTTAACATGCCTTATTTATTCTTATATCAACATATTAGGAGCTAATACAGATGAAATTTTCAGTTTTTGACAGATATAACTTTGCATAACTAATCTTTAGTGTGGGATGATTTTGATACTATCTTTGGAGTTTTGCACTGGATATTAAAAAAAATTAGCACATTGTATTGGAAAAAAATAGGTATCTGGTTAATTTTAAATATTTGGAGATGTTTTAAAAATCAGTGTTTCAGTTATACTAAAAACTTCTTTATATTTTTTATTTACTTTTAAAAGAAGCATCTGTTAAGGTAGTAAAGGTAATATTAATTCCAAACTGATGTTTGTGTGAATTTACATGTATTTTTTCATGAAATAAGTAACTTTTTTTTAAATTAAGGAGCAAAAGGAATCATCTGGGTCCATTTATTAGGTTAAAGGTGACTCATACAATGTAGGAAAAGCCAATATATGAGCTAAATGGAAAAAAAAAAAACAACCAACTTTTATATTCTAAGAAGCTTTAAAAGAACAATTCAGGGGATGTTGACAATAACTGCTACTCTGTCAGTCATGGTCTATATATGCAGTAGAATTTTATGATCCCTATATAGTAAAACATAAGAATTCACAACAGTTGTTTGAAACATTTTTTCCCTTTGACAATATGTTTTGATGCTATTATGGTTTTCTCTTTATTATATCTTAACTATATGCTGTTAAACTCTAGGATGTATCTAAATCTTTCCTTTGCTTTTTCCCCTTACTCCCCCCAAGTAGATAAATCTGTTTTCTCACATATAATGTATTTAATTTTGGAAAATTTAATGCTACAGTAAATCAAGTATGTGATTTATAGTAATCAGACCACTTTGATTCTTTTAGTTTCACAGTTTCATTTTTCCACAGATAATTATGGAGAAAATAATTACCAATTAACTGATATAAGCACGCTGTCCTCTGCTGTAAAAAGTCTGAATAGATACTGTGTATGTTTTTATGTCCATGAACTTGAGCTACTCGTGTGCAATTATGTGTATGGGAATGGAGTAGTGTTCATGATTTGTATCTACATCATCATATGGATGTATATTTATTAATAAAGTCATTAC EMBV3_05817 TCAACGGGTCGAACCTCAACAGACACATGCACCAGTGTCCCGTATTATAGCTTAAAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06770 GCCCCTAAAAGGTCATTCTACCCTTTATTCATTCTACACTTTATTTCAGGCTGGACGTGA Gene BVT0102_365283 - 1 EMBV3_12274 GK000002.2:9626709-9651630 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104442 TCONS_00104445 TCONS_00104441 TCONS_00104443 TCONS_00104444 1 XLOC_062381 Coding TCONS_00104445 XLOC_062381 Coding Coding ITGAV 2:9647266-9760283 j TSS77333 7694 1 TCONS_00104445_7 1048 0.0569274759552898 30 0.932186593048772 3.20927416977448e-10 5.42650915907698e-09 2.05414580198621e-08 2.02018046618651e-08 1.12459309054391e-11 2.60640897297365e-12 2.14473908370194e-05 4.98085978180589e-08 2.79090814140756e-09 2.29101374353045e-07 7.66568869173335e-09 2.69040757483859e-05 1.52742312157832e-09 1.10753421088995e-08 0.000173259065199983 0.00599259111063927 1.19605177682385e-07 0.00478825646446898 5.35959292904697e-06 6.77746925128538e-06 7.73979671841376e-10 2.86297224307827e-07 0.00188372745518012 0.00220308776690901 3.86029674183735e-09 8.3161467405191e-06 3.58924447128887e-07 7.09702191819676e-05 0.000233142134344753 0.000355023029758098 XM_005202252.1 ITGAV PREDICTED: Bos taurus integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) (ITGAV), transcript variant X1, 0.0 1.310e+04 100.00 0.943592409669873 NM_002210.4 ITGAV Homo sapiens integrin, alpha V (ITGAV), transcript variant 1, mRNA. 0.0 5191 88.40 0.525084481414089 TCONS_00104445_7 sp|P80746|ITAV_BOVIN ITAV_BOVIN Integrin alpha-V; 0.0 2153 99.24 0.999045801526718 3 coding 1 1 1 1 -0.00676116192248459 0.959839519431433 0.0126622417600662 0.829542921778484 CCCCACTTCCCGGGCGGCCGCTCAACAGCTCGGCCCTCCTTCCTCCCCCAGCGCTGTCCGGGACTCGCGGGGAAGCGAGCAGCTGGCAAGTTTCGGCGCGCGCAGGCGGCGGGCCGCGGGCTCCGTGCGCTCCGGGAGGGGTGGCCGCGGCTCCGGGCTCGGCGCCCCGCGCGCACTTCGACGATGGCTTCTCTGCCGCGGCGGCGACTGCGCCTTCGCCCCCGCCGCCTCCTGCTCCTTCTCCCCGGAATCCTGCTGCCTCTTTGCGGCGCCTTCAATCTAGATGTGGAGAGTCCTGCGGAGTACTCCGGCCCAGAGGGAAGTTATTTCGGCTTCGCGGTGGACTTCTTCGTGCCCAGCGCGTCTTCCAGGATGTTTCTTCTGGTGGGAGCGCCCAAAGCAAACACTACCCAGCCTGGGATTGTGGAAGGAGGGCAAGTCCTTAAGTGTGACTGGTCTTCTCACCGTAGGTGCCAGCCAATTGAGTTTGATGCCACAGGCAACAGAGATTATGCCAAGGATGATCCATTGGAGTTTAAGTCTCATCAGTGGTTTGGAGCATCTGTGAGGTCAAAACAGGATAAAATTTTGGCCTGTGCCCCACTGTATCACTGGAGGACTGAGATGAAGCAGGAAAGAGAGCCTGTGGGAACATGCTTTCTTCAGGACGGAACAAAGACTGTTGAGTATGCTCCATGCAGATCAAAAAATATTGATGCTGATGGACAGGGATTTTGTCAAGGAGGATTCAGCATTGATTTTACTAAAGCTGACAGAGTACTTCTTGGTGGTCCTGGTAGTTTTTATTGGCAAGGTCAACTCATTTCCGATCAAGTAGCAGAAATTGTATCTAAATATGACCCCAAAGTTTACAGCATCAAGTATAATAACCAGTTAGCAACCCGGACTGCACAAGCTATTTTTGATGACAGTTATTTGGGTTACTCGGTGGCCGTCGGAGATTTCAACGGTGATGGCATAGATGACTTCGTTTCAGGAGTTCCAAGAGCAGCGAGGACTTTGGGAATGGTTTATATTTATGATGGGAAAAACATGTCCTCCTTGCACAATTTTACTGGTGAACAGATGGCTGCATATTTTGGATTTTCTGTCGCTGCCACTGACATTAATGGGGATGATTACGCAGATGTGTTTATCGGCGCACCTCTCTTCATGGATCGCGGTTCTGATGGCAAACTCCAGGAGGTGGGGCAGGTCTCGGTGTCTCTGCAGAAAGCTTCGGGGGACTTCCAGACCATCAAGCTGAATGGTTTTGAGGTCTTTGCAAGGTTCGGCAGCGCCATAGCCCCTTTGGGAGATCTAGACCAGGATGGCTTCAATGATATTGCAATTGCTGCTCCATATGGGGGTGAAGATAAAAAAGGAATTGTTTATATTTTCAATGGAAGACCCACAGGCTTGAATGCAGTACCGTCTCAGATCCTTGAAGGGAAGTGGGCAGCTCGGAGCATGCCACCAAGCTTCGGCTATTCCATGAAAGGAGCCACGGATATAGACAAGAATGGATATCCAGACTTAATTGTAGGAGCTTTTGGTGTCGATAGAGCTGTATTATACAGGGCCAGACCAGTTATCACTGTAAATGCTGGCCTTGAAGTGTACCCTAGCATTTTAAATCAAGAAAATAAAACCTGCCCTCTGCCTGGGACAGATCTCAAAGTTTCCTGTTTTAATGTCAGGTTCTGCTTAAAGGCAGATGGCAAAGGAGCACTTCCTACGAAGCTTGACTTCCAGGTGGAGCTTCTTTTGGATAAACTCAAGCAGAAAGGAGCAATTCGACGAGCACTCTTTCTCCATAACAGGTCCCCGGGTCACTCCAAGAACATGACCATCTCAAGGGGGGGACAGATGCAGTGTGAGGAGCTGATCGCATATCTGCGGGATGAATCTGAATTTAGAGACAAACTCACTCCAATTACTATTTTTATGGAGTATTGGTTGGATTATAGAACAGCTGCTGATGCAACAGGGTTGCAACCTATTCTTAACCAATTTACTCCTGCCAATGTTAGTCGACAGGCTCATATTCTACTTGACTGTGGTGAAGACAATGTCTGTAAGCCCAAACTGGAGGTTTCTGTAGATAGTGATCAAAAGAAGATCTATATTGGGGACGACAACCCTCTGACCTTGATTGTTAAGGCTCAGAATCAGGGGGAAGGTGCCTATGAAGCCGAGCTCATCGTTTCCATCCCACTGCAGGCTGATTTCATCGGGGTTGTCCGTAACAGTGAAGCCTTAGCAAGACTTTCCTGTGCGTTTAAGACAGAAAACCAAACCCGCCAGGTGGTTTGTGACCTTGGAAACCCAATGAAGGCTGGAACTCAACTCTTAGCTGGTCTCCGTTTCAGTGTGCACCAGCAATCAGAGATGGATACGTCTGTGAAATTTGATTTACAAATTCAAAGCTCCAATCTTTTTGATAAAGTAAGCCCGGTTGTATCTTACAAAGTTGACCTTGCTGTTTTAGCTGCTGTTGAGATAAGAGGAGTCTCAAGTCCTGATCATATCTTTCTTCCGATTCCAAATTGGAAGTACAAAGAGAACCCTGAGACTGAAGAAGACGTTGGGCCAGTTGTTCAGCACATCTATGAGCTGAGAAACAACGGTCCGAGTTCATTCAGCAAGGCAATGCTACATCTTCAGTGGCCTTACAAATATAACAATAACACCTTGTTGTACATCCTTCAATATGATATTGATGGGCCAATGAACTGCACTTCAGATATGGAGATTAACCCTTTGAGAATTAAGATCTCAAATTCACAAACAAGTGAAAAGAATGATACAGTTGGTGGGCAAGGCGACCGGAACCATCTCATCACGAAGCGGGATCTCACCCTCAATGAAGGAGACGTTCACACTTTGGGTTGTGGAATTGCTGAATGCTTGAAGATTGTCTGCCAGGTGGGGCGACTAGACAGAGGAAAGAGTGCAATCCTGTATGTGAGGTCTCTCCTGTGGACCGAGACCTTTATGAATAAGGAAAACCAGAATCATTCATATTCTTTGAAGTCATCTGCTTCATTTAATGTCATAGAGTTTCCTTATAAAAACCTTCCAATTGAGGACATCTTCAACTCCACATTGGTCACCACAAATGTCACCTGGGGCATTCAGCCGGCACCCATGCCTGTTCCTGTGTGGGTGATCATTTTAGCTGTTCTAGCAGGATTGTTGTTACTGGCTGTTTTAGTTTTTGTAATGTACAGGATGGGCTTTTTTAAGCGTGTACGGCCACCTCAAGAAGAACAAGAAAGGGAACAGCTTCAGCCTCATGAAAATGGTGAAGGAAACTCAGAAACTTAACTGTAATTTTTAAGTTACGCTACATCCTGATCCATTAGAAGTTCCAACTTCAGTTTAGATTTTAATTTCCTTCCTGAGGAATAAAATTCCAAGACCGTACTGCTGATGGTGCCCATTGGTGTTAACCACAAAGTGAGAGCAATATTTGTCATCCTTTTCATTATGATTAAGTTCATACATACATTTAATACCCCTACTGACTTGTGTTTTTAGGTATTTAAATAATAACATTTCAAGTGATAGGTCTTCTTCAGTGTACATAAGATAGTGCCTGAGTTACCACTTTATCTAAAATAGTACCTCCTACAATTACTGTTTCTGATTTTGTATGTTGGATTTTGTTTGTCTTTTTTGTTGTTTTAAAGCAATCCAAATTTGGACCTTAGGATCCACATCTTTTGTGCAGATATATGATGTTAATACACGTTACACTACACTTGAGTTTTCAAGCTAACTTCATAGCTGTATAAACTTGGATTTTAATATTACCTATATGGTAGGACTTTTAAAAAAAGAAAAACGCATGATCCCATCAAAACTCTTTCTTGTAACTGCAAAGGTACAGATTTTTGTTTTAATGTGAAAATTGAGTACATGCTATTAAACTTGTATTTATATTTTTATCCACAGTCCATTTGATTACATTTTTTTTTGTATAAGTTTAAATTCTATTTCAAATCCTTTAAGTCAACTTATACTAAAAAATTAGTTTTTCCTGGTAGCTCAGCAGTAAAGAATCTACCTGCAATGCAGGAGATGCGGGTTTCATCCCCGCATCAGGAAGATTCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTGGAGTTCTCTTGCCTGGAAAATTCCATGGATAGAGGAGCCTGGCAGGCTACAGTCCATGGTGTCGCAAAGAGTTGGACTTGACTGAGCGACTAATACACACACAAGTTATATTTCAAATCCTTTAAGTCAACTTATACTAAAAATTAGTTTTATAATCAAAATTGCCTCTTTTGCATAATTGTTTAATTTCTGCTAAACATCATGATGCTTGAAGTTAGATGGAATTGGAAATTGTTTCCAAAGTATATTCTATTGCATTAGTCTGGCTGTAGACAATACCAGGAAAAAAAAAAAAAGCATTTAAATTAAAAGGCTATGTAGTTCTTTGACAGAGTTGCTTATTGAATAGTTTGTTCTTAGATTAGAGCAAGAGTTTTTAAGTTGGGATTAATTTATTTTCCTCCTATATATGTATTTTTCCTTATATTTTCAAAACTGTTATTGAGAATGTGTCAAGATCATTGAGAAAACTTTACAGTTTATAAGAACGTGCACTCAACCTCTGAATCCCACAAGAAATGCTAAGGTAGCTCACTGGTTTACTTCTAGCAATAGCATGATGCTACTCACATGGATATTACCTCAGTTGAAACCAGGTATAACATGTAAAACCAGTCTCAGCTATCATAATAACTTCTTAGAGGTTATTTTATAGGCAATTCAAGTTATTGGAAACCTTTTAAAATTTTCTTAGTTTTATTAATATGAACTACTTTTCTAGGATTTTTAAATAAAAGCTGTACAGGTGGCAAGTTGTAGTTTTTTAAGTCTGTAGGGTGATGAATCTTACTAGAAGATTATGTGAATTATTCACAGTTCCTCCAGGCCTGGGGATAACTGTTAATTATACCTATTTTTGTGTAATTACATCATATTGTGCATTAGAAATTGAGAGTTCAATAGCTTTTTAACTACTGCCTTCATTAGGTGATGATAAATATTTCCCTTAGATAATTGAATATTTTTCCATGTTTTAAAAATAATTGAAATTTTCTTGCCATGGCTTGTGTTATAACTCCCTACACAAGTGGCTAAACTAGAATACATTCATAAAATAGAGGCATATGTAGGTGAGTTGTACAAACAAGTTAGAACATTGACAAGACCCTATATTTAGCTTTAGTGACTTTCAAAATTGGTGTTATAATATAGATTTTACTAGTAGCTTAAAAGATCGTAGGTAGTCATACACAATAAGTACTTTTGTTACCAATAAATTTAAAGTTTTTTAAATAAAAATTTTTTTTATCATAGGGCCTGCCCCAAGACAGTTGCTAAGTTGGTCTAGAACAGCATTTACCTCACCTGTTTTCCCATCTAATAGCGGGTCATTCCTGGAAATATCTGTTGGATAGAAAGTCACTCTTTCAAAAAGTTAAATGTTACTATTTGCTTTTGCACAATCTGTTCCTTTTATGGCCTCTTCTCTCAAGATATAATCTTTTATGAGCGATTGAAGGAGGAGCCAAAATAGCTCAGTTGGGAGAGCATTAGACTAGAGGAGACTGAAGGGTCTTGTCATGAAAATTAACATGTTTTAAATTGCTCTTATGAACTGTAATTTAAAGCAATAGTATTTTCTTTTTTAAAAAAAATTTTATCTCTACAAAAATATGGTAGTCTAGACTTTGAAGACTAAAAACCTAGTCTTTGAAGAAAATATTTGGCAAAATGTTGGGATTAAAGTAACGTAAATGTTTTGGTTAAAATGTCAAAAAATAATCACTGCTGTATTTGTGATTTATTGAGAACTGAAAGCTGTTTTGACTGTAAAATTCTTATAATCTGGTTCAGTTTAAGAAATCACATATCGTTGGAGTTGGGAATATCGTAAAATATATGATATTGGTAAGAAATTGATTATGTTGTTGATTTCTTATGTAGGCATTTATTTCAGACTTAATATTTTGCAAAACATTTGTGTGAGGAATGCTCTTTCCTTTTCTTCCCTTTACCTTTCTGTTGTAATTAGTGATTATTATAATTCTGATTAAGTTCTTAATACTGAGTTGTAAAACAGTTAATCAAAATATTAGTGCCACAATTCTACATGTTTTGAAACTAATTATTCATAGTAAATTCTCATTAATACTTTATATAAAGAGAAAATTCAAGTGTTAGAGGCTCTACTGACTTCTCTAAGAGGATGTGAAAGGTTTCTGATAGTGAATCATAACCCTAAGAGAGATGTATGTGGCAAAAGTATAGTGTATAATAAGATCAGCGGGTTTTTTATAAGGCATACAGTCTGTAAATTGATAGATGTCCCTGTGTTACAGAATGTAGTGTTGAGCTTGCAAAGAATAAGCCATTCTTGGAATATTTGTGTACAACTGTTGCTTATCTCAGTATCACTGTGTTAGTGCTCTTGGATAGCTTATATATGCGATAGCTTGATTAATAAGAAAAATACAAAATTTGAAAATTGAATATAAGATCAAAAATAGAGAATGAAATGATGTAGTGCTCAGTGTTGTAGAGAGTATTTCTTTTAACTTGTTGGTAGGCTAGTTTGGCCAATGAACGTATCATGTAGCATGCATGTATGCTTGTATTTCATTGTAATTTCTCATACATAATGAATTTTTTGGCAGAGGTACTGAATCTTTGATTTTTTTTTGCTGTTGTTCTTCTCAAGTGCAATATAACAATGTAACCAAACCTAGATATTTCAAAGTCTAATTTAGTAAACCTAATCTAAAAGAATTTATTAGTATTTTTGTAAGCAGGAAGGAAGGATTCTGAGATGGATATATGAATGAAGTTATTTGCCCCTAAAAGGTCATTCTACCCTTTATTCATTCTACACTTTATTTCAGGCTGGACGTGAACTGTTCCCTGCTAGTTTTGAAACACTTTACAGTATCTTAAAGTTACTTGGAAGTTGTGTATATCAATTAATTTCCTACCTAGGTAACATAGAAAGTCATTTTCTTTCTTTAGCTCTCTTGTGATCACCCACATTGGGTGAGGCATAAAATGAGTGTGTTCTAAAATTTATGATTTGCTAACTTGATTTGAGTTAGTGAAAACTGGTACAGTGTTCTTCTTATTAGTTTCCAATGTGTAACTTGTGTCTGTTCAATAAACTTGAGCATGTGGTGCCACTTTTGTGCGTGGATGTTCTATTTTCCTTCTGTGATGTTGCTTTTTTTTAATCACAGGAGCCAGCAACAATGCACTAAAAGGATGACCTCAAAGAGGTGGCACATCTCTTTAAAAGTCCCAATTCTTAGCAGTGTTAGTTGGGAGGTGGAGGTTGACATACATACACTATTGACACTGTGTATAAAATAGATCACTAATGAGAACTTACTGTATAGCTTAGAGAACTCTACTCAGTGCTCTGTGGTGATGTAAATGGGAAGGAAATCCAAAAAAGGAGGGGTATATGTAAACATATAGCTGATTCACTTTGCTGTACAGCAGAAACTAATGCAACATTGTAAAGTAACTATATTCCAATAAAAATTCATAAAAAATTGAAATTTATCTACCTGCCTATCAACTTTCTGTAATAAACATGTATGTTCAAGTAAGA EMBV3_26664 GTGAATATTATGTACCTAGAGGAAATCGTAGGCGGTTCCGTGTTAGGCAGCCCATCCTGC Gene GeneID:768028|BEX2:NM_001077087:8_cdna Constitutive 0 NULL GeneID:768028 X GENE BEX2 MGC137041 brain expressed X-linked 2 EMBV3_13999 ACCACCCTTCAAATCCGTGTGGAGCAGGTTAGATGGACAGTGGCCTGATGGTTTATTGGC Gene GeneID:534360|LOC534360:XM_002684745:202_cdna UTR3_Alt 2 NULL GeneID:534360 1 GENE LOC534360 NULL similar to poliovirus receptor-related 3 EMBV3_41476 TCCAGAGCCTCCGTTTTTAACAAGATCCATTCACAGGCCAAATGCCATCCTGTGTGTGCC Gene GeneID:100337023|LOC100337023:XM_002691720:108_cdna Constitutive 0 NULL GeneID:100337023 11 GENE LOC100337023 NULL collagen alpha-1(V) chain-like EMBV3_22629 TTGGCCGTGCTTACCATCTTCACCATACTGGAGTTCTTCATTGCAGTCATTGCCACCCAC Gene GeneID:520852|MS4A15:XM_002699255:287_cdna Constitutive 0 NULL GeneID:520852 29 GENE MS4A15 NULL membrane-spanning 4-domains, subfamily A, member 15 EMBV3_18198 GGTTGATGGTCAGTGGCCCCAATTTCGAACCATCCAGGAGAAGGAAGTCACCATCCTGAA Gene GeneID:518845|PRSS50:XM_002697092:196_cdna Constitutive 0 NULL GeneID:518845 22 GENE PRSS50 NULL protease, serine, 50 EMBV3_22756 ATTTTGAGCAGCACCATCAAATCTTACAACGCCGGGTTTGCTGCTGAGGGTGTGGAATCG Variant GeneID:517857|C3H1orf123:NM_001038130:55_cdna 305^382 5 EMBV3_14403 GeneID:517857 3 GENE C3H1orf123 C1orf123 MGC133492 chromosome 1 open reading frame 123 ortholog EMBV3_23589 CGCTGATGGAGGAGACCATGAAGGAGGTGAAGGCCTGGCGCCAGAAGCTGCACGGGCGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11819 TACACTGGGGCAAATCAGTGTAGTGGTGGAGGAAAAGCCGGGAGGCCTATTCTTATAGGA Gene BVV0102_031329 - 1 EMBV3_08470 GK000003.2:110497534-110530532 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29319 ACCATGGGGTCGTTTGGTGAGAAAGTGAAGTACCACTGCGAAGAGCGACAGACACCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00708 CTTTTCATCTTCCCAAGTCATTAAAATGCAAATTGGTGGGGGTGGAGGAGAGGCCCGCGG Gene BVV0102_270381 - 1 EMBV3_28458 GK000026.2:26014014-27810197 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15344 TACCCGCAGTGCCATCATCCTGCACCTCAGTAATGGCTGTGTGCAGATCAACTTCTTCCA Gene GeneID:538238|PLK1:NM_001038173:371_cdna Constitutive 2 NULL GeneID:538238 25 GENE PLK1 MGC133927 polo-like kinase 1 (Drosophila) EMBV3_41087 CCAGGATATGGAGACTGTTCAATCACCAGGGACCTAAGGAAAGCTGGATTGCTGATTTTT Variant GeneID:519694|ARL5A:NM_001046245:91_cdna 302^594 1 EMBV3_00288 GeneID:519694 2 GENE ARL5A MGC128509 ADP-ribosylation factor-like 5A EMBV3_06006 ATGTGGACCCCAAGAACCAGATCATGCAGAAGATGAGTCAGAGCCTCAACCACGTGCCAA Gene GeneID:281787|GLYAT:NM_177513:5_cdna Constitutive 0 NULL GeneID:281787 15 GENE GLYAT MGC137264 glycine-N-acyltransferase EMBV3_29630 AACCACAACCGGAGGACCATGGCTGACCGCAAGAGAAGTAAAGGCATGATTCCATCGTGA Gene GeneID:505503|ASCC2:NM_001015524:32_cdna Constitutive 1 NULL GeneID:505503 17 GENE ASCC2 NULL activating signal cointegrator 1 complex subunit 2 EMBV3_05922 ATACAGATGTCTCTACTCAAGACTCCGTGCCTCCTACGACAGAGTCCAACTAACAGCTGC Gene GeneID:100295797|LOC100295797:XM_002688997:83_cdna Constitutive 0 NULL GeneID:100295797 7 GENE LOC100295797 NULL hypothetical protein LOC100295797 EMBV3_30564 AGTCTGGTGATACTGGGGGGTGATGGGAGGTCGTGTATAAAGACACTGTGAGAGCAGCAA Gene BVV0101_079028 + 0 NULL GK000010.2:103069720-103185399 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08101 AGTGTAGCAGAGAATATATGGACGGCTTGCTTTGGGCGCCTCCTTGCCCCACTCATTCTT Gene GeneID:282160|CACNB3:NM_174509:14_cdna Constitutive 0 NULL GeneID:282160 5 GENE CACNB3 NULL calcium channel, voltage-dependent, beta 3 subunit EMBV3_09855 TAGGTTCCACGCTCACCATGCTCCTGCCTCTCTGTGGGAACAATCGCATTGACCACTTTT Gene GeneID:522954|LOC522954:XM_002689070:76_cdna Constitutive 0 NULL GeneID:522954 7 GENE LOC522954 NULL similar to olfactory receptor, family 2, subfamily C, member 3 EMBV3_42279 TTCGTGGTGGCAACTCTTCAGCAGCTAAAGCCCATCTTTTGAAGAGAGTAAAGACTACAT Variant GeneID:527979|LRRC6:NM_001075904:26_cdna 503^729 2 EMBV3_27805 GeneID:527979 14 GENE LRRC6 NULL leucine rich repeat containing 6 EMBV3_10415 CACGTGGAAGGGGGGAAAAAACAATCCTCTCTCCTGACTTGGTTTTTGAGAAGGTTACTG Gene GeneID:506916|NUP54:NM_001075285:47_cdna Constitutive 0 NULL GeneID:506916 6 GENE NUP54 MGC137666 nucleoporin 54kDa EMBV3_37656 ATTCGCAATTGCCATTGACGCTGTAGTTGCCCGCACCATCTGTCACGAAGCCTGGAGCCT Gene BVT0102_211759 - 1 EMBV3_19153 GK000018.2:51275005-51293110 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086700 TCONS_00086701 1 XLOC_052222 Coding TCONS_00086700 XLOC_052222 Coding Coding MEGF8 18:51245927-51292639 j TSS64478 10636 1 TCONS_00086700_18 2760 0.0730537796163971 41 0.773179764937595 0.000115092791239445 1.50891160039964e-05 3.56477061567552e-05 6.48277736748276e-05 1.29969431338081e-05 3.26131429145982e-05 5.70076290951246e-05 0 1.37027939878738e-05 8.88649145910751e-06 8.5478290126426e-07 0 1.61097185609782e-06 4.41011187256207e-06 5.14904722022365e-06 0.000206036945406418 7.17602815127214e-05 7.01083031436815e-06 0.000103809800654427 3.51402126639362e-05 1.1334603809683e-06 7.53313292209064e-05 3.44776706894567e-05 0.000105561840897932 7.62126568132796e-05 3.63036361146573e-05 4.1300294149525e-05 1.08113788352156e-05 1.36799550491307e-05 7.9122167162178e-05 XM_002701886.2 MEGF8 PREDICTED: Bos taurus multiple EGF-like-domains 8 (MEGF8), mRNA. 0.0 8785 100.00 0.457878901842798 XM_005258611.1 MEGF8 PREDICTED: Homo sapiens multiple EGF-like-domains 8 (MEGF8), 0.0 7196 90.26 0.495863106430989 TCONS_00086700_18 sp|P60882|MEGF8_MOUSE MEGF8_MOUSE Multiple epidermal growth factor-like domains protein 8; 0.0 3157 95.16 0.636231884057971 0 coding 0 0 0 0 0.00140428831118545 0.992458131481978 -0.00234807875795101 0.958731917952249 CCTCTTTATTTTTTATCCCACAGCGGCTGCTAGGCCCCCTCCCTCTCGTCCTCCCCGCGTTCTTCCCGTGGCCGCTCTCGCCCGAGTGTCCCCTCGTCTCTCTGATCTGGCTCATCCGGCTCGGACGGGAGTCGCGGGTGGGTGAGCAAGCGAGTTCGTCTATGGGGTCCAGGCCTGAGCCCCTGAAGACTGACTCTGCCCCGGGGCAGCCGCTCGCGCCCCGCCCCTGGCTGGAGGGTTCTCTCCCGGAGGACCCTCCGGTCCAGGACGTGCCCGCATCCTTGATGTAGGCCCCCGCCGAACTGTACACCTCTTCGCCCACTGGGGACCCGAGTGGTCTATAAGGTCCGTTTCGGCCTGCAGCGGCCCGCGACTGTAACTGCTGGACATCGTTTATGGGGTCAGCTAGCCTATGGGGGCCCATGTCTACAAGAGACTCCCATGGCCCCTAAGGGTCTGCCCCGACCATAACGACCCCCATTACAGGGTTTTCCATGGGTCTGTAGGGCCCACCCCTCCATCTCCAGAGCCCGGCGACAACGGCTGTCTCAGCGGCTCCTGGACCCCGCTGGTCTACAAGGCCATGTCCCATCCATAGAGGTCGCATTTGCAGGGCTTCAAACGGGGTGGAAGGCCCTCTCCGGGGCTTTACGACCCCTCAGTACGGGAGGAGGCGGCGATGGCCCTGGGTCGGGCTCTGGCTGTGGCGCTGGCTGTATCATTGGCCGTGCTGGGGCCACTGTCTCCTGGAGCCCAGGCAGGGGACTGCAAGGGGCAGCGGCAAGTGCTGCGGGAGGCTCCAGGCTTCGTGACAGATGGTGCGGGCAACTACAGCGTCAATGGCAATTGCGAATGGCTCATCGAGGCCCCGAGCTCCCAGCACCGGATCCTACTGGACTTCCTTTTCCTGGACACAGAATGCACTTATGACTACCTGTTCGTGTATGACGGTGACTCCCCCCGCGGGCCCCTGCTGGCCAGTCTGAGTGGGAGCACACGGCCTCCGCCCATCGAGGCTTCCTCGGGCAAGATGCTGCTGCACCTCTTCAGCGATGCCAACTACAACCTGCTGGGCTTCAACGCCTCCTTCCGCTTCTCCCTGTGCCCGGGTGGCTGCCGCAGCCATGGGCAGTGCCAGCCCCCAGGGGTGTGTGTCTGTGAGCCGGGCTGGGGGGGCCCCGACTGCAGCCTGCAGGAGTGCTCAGCCTACTGCGGCAGCCATGGCACCTGCACCTCGCCCCTGGGACCGTGCCGCTGTGAGCCTGGTTTCCTGGGACGCGCCTGTGACCTGCACCTGTGGGAGAACCAGGGGGCTGGCTGGTGGCACAACGTGAGTGCCGGGGACCCCGCCTTCTCTGCCCGTATCGGGGCAGCCGGGGCCTTCCTGTCCCCACTGGGGCTGCTGGCTGTTTTTGGAGGCCAGGACCTCAACCGCGCGCTGGGGGACCTCGTCCTGTACAACTTCTCTGCCAACACCTGGGAGCGCTGGGACCTGAGCCCTGCCCCGGCTGCCCGTCACTCCCACGTGGCTGTGGCTTGGGCCGGCTCCCTGGTGCTGATGGGCGGTGAGCTGGCTGATGGCACCCTCACCAGCGACATCTGGGCCTTTAGCCCGATGGGTGGCGGCCGCTGGGAGCTTCTGGCACCACCTGCCTCCAGTCCCTCGGGGCCGCCCGGCCTGGCAGGTCATGCAGCAGCCCTGGTGGACAACACGTGGCTCTATGTGTCTGGTGGCCGCACCCAGCACGACCTCTTCTCCTCCGGCCTCTTCCGTTTCCGCCTCGACGGCACCAGTGGGGGCTATTGGGAGCAGGTGATGCCAGCAGGTGGGCGGCCCCCTGCCGCCACCGGCCATTCCATGGTGTTCCATGCCGCCTCCCGTGCCCTGCTGGTTCACGGTGGACACCGGCCCTCCACTGCCCGATTCTCTGTGCGGGTGAACTCCACCGAGCTCTTCCATGTGGATCGGCGCGTGTGGACCACCCTGAAGGGCCGGGAGGGACTTCACGGCCCACGGGAGCGAGCCTTCCACACGGCCAGCGTCCTGGGCAACTACATGCTGGTCTATGGGGGCAACGTGCACACCCACTACCAGGAGGAAAAGTGCTATGAAGACGGCATCTTCTTCTACCACCTGGGCTGCCATCAGTGGGTGTCAGGGGCTGAGCTTGCCCCTCCAGGAACTCCAGAGGGCCGAGCAGCGCCTCCTAGTGGCCGGTACTCACACGTGGCGGCTGTGCTTGGTGGCAGTGTCCTGTTGGTGGCCGGGGGGTACAGTGGCCGGCCTCGTGGGGACTTGATGGCCTACAAAGTGCCCCCCTTTGTGTTCCAGGCGCCTGCTCCAGATTACCACTTGGACTATTGCTCCATGTACACGGACCACAGCGTCTGCTCCCGAGACCCCGAATGCAGTTGGTGTCAGGGGGCCTGCCAAGCCGCCCCACCTCCTGGGACTCCCTCAGGGGCTTGTCCGGCTGCCAGCTGCCTGGGCCTGAGCCGTCTCCTGGGTGACTGCCAGGCCTGCCTGGCGTTCAGCAGCAGTGCGGCTCCCCCCCAGGGGCCCGGTGCCCTGGGCTGGTGCGTGCACAATGAGAGCTGCCTCCCTCGGCCTGGTGGCGGGGCAGCAAGAGCGGGGCCTGGCCTGTCCTACTGTGTGTGGGTTGTCTCGGCCACTGAGGTGCTGCAGCCCTGTGCCCCCGGGACACTCTGTCCCCCGCTTACCCTCACCTTCTCCCCCGACAGCAGCACCCCGTGCACGGCTGCCTCCTGTTTCCTGGACCCCAGTTTCCCATTCCCCAGTCCAGGCATGATAAAAGTTTGTACCTTGAGGGCCAACTCTGATCGATTGGTAGTGGCTGCCAGGATCTGTGTATTGAGAGACTCCATGCACAACCACACTCATGGCTCTGCAGACACTCGTGACAGCTCGGGAAGCGGTCACAGCTCCGGCACCGAGGCTCCGAGTGCACGCTGTGGGGAGGCGGGTGTGAGGCCGCCCGAGCTACCCCCGCCCCGCCCCACCTCCACCCTCCCCTTCCGCGCCCCTGCCGCCCGCCCGCACCTGTCGTCCCAGCCTCGGCAGCCCCCGTGCGGGTACCGGGCCAGCGGAGCTCACTGGCTGCAGAGTGGGGGGCACTCTTCCGGACTCTTCAGGGCGCCCCGACCCCGGCCGCGCCGGCTGCACGCCGCGTCCCCCTTGCGGCTGCCTGGTGCGCACCTGGGTGCAGGCGTGGCAGTCGCGATGCTCCTCGCAGAGCGGGCAGAGGGCAGGCACCAGCACGAGCAGGGACCCGCCGGCCCCAGCGTCCCTACAGTGGGCGCCGCTCTGGCGCAGGTGGCAGGTGGCGCTGGCCAGGCACCAGCCGCAGCCCTGGTCTGCCAGGCAGCCCAGGCAGGAGGAGTAGGAGGCGCAGGCCGACGAGCGGTAGGGCTCCAGGAAGAAGAAGGAGATCTCCTGGGGGTGAGGGTGTCAGAGGAGGGTGAGGGCTCCATGCTCCAGGTCAAGCCTGCTGAGTGTCCCAGGCATTCTTACCATGTTTTCTGTGTCCGGGCCCCGGGCCATCCGGGCCAGCACATGCAGGCGCTGGGCCCGGGCCCACACGGCCACATCCTCAGCCCCAGACCCCCCAGGGCCTCCCGGCAGCAGCGGGTGGATGAAGCCACGGCTGGGAGGCGTTGGGTGGCTGCTGGAAGTTGCCTCCAAGGGGACTTCTCAGGGCCTCTGAGTGGGGGGAACTGCTCCCTGTGGGTCGGGGAGGGCCTGGGGCTGTCTGTGGCCCTCCCCGCCCGCTGGGCGTATGCCCGCTGTCCGGATGTAGACGAGTGCCGCCTGGGCCTGGCGCGGTGCCACCTGCGGGCGACCTGCCTGAACACACCCCTCAGCTACGAGTGTCACTGCCAGAGGGGCTACCAGGGCGATGGCGTCACTTACTGCAACCGCACGTGCCTGGAGGACTGTGGCCACGGTGTGTGCAGCGGCCCCCCAGACTTCACCTGCGTGTGTGACCTGGGCTGGACATCAGACCTGCCCCTTCCCACGCCGGCCCCCGGCCCCCCCGCCCCCCGCTGTTCGCGGGACTGTGGCTGCAACTTCCACAGCCACTGCCACAAGCGGGGGCCCGGCTTCTGCGATGAGTGCCAGGACTGGACGTGGGGGGAGCACTGTGAGCGGTGCCGGCCTGGAAGCTTCGGGAATGCCACAGGCTCCGGCGGCTGCCGGCCCTGCCAGTGCAACGGGCATGGGGACCCTCGCCGAGGCCACTGTGACAACCTCAGCGGGCTCTGCTTCTGCCAGGACCACACCGAGGGTGCCCACTGCCAGCTCTGCTCCCCTGGCTACTACGGGGACCCTCGGGCAGGTGGCTCCTGCTTCCGGGAGTGTGGGGGTCGTGCCCTCCTCACCAACGTGTCCTCAGTGGCACTGGGCTCACGCCGGTTTGGGGGGCTCCTGCCTGCAGGTGGCGGGGCAGCAAGAGCGGGGCCTGGCCTGTCCTACTGTGTGTGGGTTGTCTCGGCCACTGAGGTGCTGCAGCCCTGTGCCCCCGGGACCCTCTGTCCCCCGCTTACCCTCACCTTCTCCCCCGACAGCAGCACCCCGTGCACGCTGAGCTATGTCCTGGCCTTTGATGGATTCCCACGCTTCCTAGACACTGGTGTCGTCCAGTCGGACCGTAGCCTCATCGCTGCGTTTTGCGGCCAGCGGCGGGACCGGCCCCTCACTGTGCAGGCCCTGTCTGGGCTGCTGGTACTGCACTGGGAGGCCAATGGCTCCTCATCCTGGGGCTTCAATGCCTCCGTGGGCTCTGCCCGCTGTGGGTCAGGGGGCCCCGGGAGCTGCCCTGTCCCCCAGGAGTGTGTGCCCCAGGATGGGGTCCCAGGTGCTGGACTCTGCCGGTGTCCCCAGGGCTGGGCTGGCCCGCACTGCCGCATGGCTGTGTGTCCTGAGAACTGTAATGCCCACAACGGGGCGGGGACGTGTAATCAGAGCCTGGGCGTGTGCGTCTGTGCTGAGGGCTTTGGGGGTCCTGACTGTGCCACGAAGCTGGATGGTGGGCAGCTGGTCTGGGAGACCCTCATGGACAGCCGCCTCTCAGCTGACACTGCCAGCCGCTTCCTGCACCGCCTGGGGCACACGATGGTGGAGGGACCTGATGCCACCTTGTGGATGTTTGGGGGCCTGGGCCTGCCCCAGGGGCTGCTGGGAAACCTGTATAGGTACTCAGTGAGTGAACGGCGGTGGACACAGATGTTGGCAGGAGCCGAGGATGGGGGCCCAGGCCCCTCCCCTCGCTCTTTCCACTCTGCTGCCTACGTGCCTGCTGGCCGTGGGGCCATGTACCTGCTGGGGGGGCTCACAGCTGGGGGCATCGCCCGGGACTTCTGGGTCCTCAACCTCACCACCCTGCAGTGGCGGCAGGAGAAGGCCCCTCAGACTGTGGAGCTGCCAGCCGTTGCTGGTCACACGCTTACTGCCCGCCGAGGCCTATCTCTGCTCCTGGTGGGTGGTTACTCCCCGGAAAATGGCTTCAACCAGCAGCTGCTTGAGTACCAGCTGGCGACTGGCACCTGGGTGTCCGGGGCTCAGAGCGGGACACCCCCCACAGGTCTCTACGGTCACTCTGCTGTGTATCATGAGGCCACCGACTCCCTCTACGTGTTCGGGGGTTTCCGCTTCCACGTGGAGCTGGCAGCCCCGTCCCCTGAGCTCTACTCCCTGCACTGCCCTGACCGCACCTGGAGCCTGCTGGCCCCTTCTCAGGGAGCAAAGCCCCGGCCCCGACTCTTCCACGCCTCGGCCTTGCTAGGGGACACCATGGTGGTCCTCGGGGGGCGCTCAGACCCCGACGAGTTCAGCAGCGACGTGCTGCTCTACCAGGTCAACTGCAACACCTGGCTCCTGCCCGACCTCATCGGCCCAGCCTCTGTGGGACCGCCAATGGAAGAGTCTGTGGCTCACGCCGTGGCCGCGGTAGGGGGTCACCTGTTTATCTCAGGAGGCTTTGGGGGAGTGGCCCTGGGCCGCCTGCTGGCCCTGACCCTGCCCCCTGACCCCTGCCGCCTGCTGCCCTCGCCCGAAGCTTGTAACCAGACTGGGGCCTGTACCTGGTGCCATGGAGCCTGCCTGTCTGGGGACCAGGCCCACAGGCTGGGCTGTGGCGGCACCCCCTGCTCCCCTATGCCCCACTCCCCCGAGGAATGTCGACGTCTGCGGACCTGCAGCGAGTGCCTGGCCCGCCATCCCCGGACCCTGCAGCCTGGAGATGGAGAGGCCTCTGCCCCACGCTGTAAGTGGTGTACCAACTGCCCCGAGGGTGCCTGCATTGGGCGCAACGGGTCCTGCACCTCAGAGAATGACTGTCGCATCAACCAGCGCGAGGTCTTCTGGGCCGGGAACTGCTCGGAGGCTGTGTGCGGGGCGGCCGACTGCGAGCAGTGCACCAGGGAGGGCAAATGCATGTGGACGCGGCAGTTCAAGAGGACGGGGGAGACCCGCCGCATCCTTTCGGTGCAGCCCACCTACGACTGGACGTGCTTCAGCCACTCACTGCTGAACGTGTCCCCGATGCCAGTGGAGTCATCGCCCCCGCTGCCCTGCCCCACACCCTGTCACCTCCTGCCCAACTGCACCTCCTGCCTGGACTCCAAGGGTGCTGACGGGGGCTGGCAGCACTGCGTCTGGAGCAGCAGCCTCCAGCAGTGTCTGAGCCCCTCCTATCTGCCCCTGCGGTGTATGGCCGGAGGCTGTGGGCGGCTGCTCCGCGGACCCGAGAGCTGCTCCCTGGGCTGTGCTCAGGCAACCCAGTGTGCCCTGTGCCTGCGGCGCCCCCACTGTGGCTGGTGTACCTGGGGGGGCCAGGATGGGGGCGGCCGCTGCCTGGAGGGTGGACTCAGTGGCCCCCGTGACGGGCTGACGTGTGGGCGACCTGGGGCCTCCTGGGCCTTTCTTTCCTGCCCCCCGGAGGACGAATGTGCCAACGGGCACCATGACTGCAACGAGACCCAGAACTGCCACGACCGGCCCCACGGTTACGAGTGCAGCTGCAAGGCAGGCTACACCATGGACAACGTGACGGGGCTGTGCCGCCCAGTGTGCGCCCAGGGTTGCGTGAACGGCTCGTGTGTGGAGCCCGACCACTGCCGCTGCCACTTCGGCTTCGTCGGCCGCAACTGTTCCACGGAGTGTCGCTGCAACCGCCACAGCGACTGCGCCGGCGTGGGGGCCCGCGACCACTGCCTGCTCTGCCACAATCACACCAAGGGCAGCCACTGTGAGCAGTGCCTCCCGCTGTTCGTGGGCTCAGCCGTAGGGGGAGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGCGGAAACAGCCACGTCTGCGTCTCCAGGAAGGAGCTTGAGATAGCCAGGAGGGAGCCGGAGAAGTACTCGCTGGATCCAGATGAGATTGAACACTGGGCGACAGAGGGTCCCAGCGAAGATGAGGCTGTGTGTGTGAACTGCCAGAATAACAGCTATGGGGATAAGTGTGAGAGCTGCCTCCACGGCTACTTCCTCCTCGACGGGAAATGCACCAAATGCCAGTGTAATGGCCACGCGGACACATGTAATGAGCAGGATGGGACAGGCTGCCCATGTCAGAACAACACAGAGACAGGCACGTGCCAGGGCAGCTCCCCCAGTGACCGCCGAGACTGCTACAAATACCAGTGTGCCAAGTGCCGAGAGTCATTCCACGGGAGCCCGCTAGGGGGCCAGCAGTGCTACCGCCTCATCTCCGTGGAACAGGAGTACTGCCTGGACCCCACGTCCCAAACCAACTGTTTCCACGAGCCCAAGCGCCGGGCTCTGGGTCCCGGACGCACCGTTCTCTTTGGAGTGCAGCCTAAGTTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTTGGCGCCGTGGACCTCTACGTCTCCACCTCCTATGACACCTTCGTGGTCCGCGTGGCTCCCGACACTGGTGTCCACACCGTGCATATCCAGCCGCCACCACCTCCCCCACCCCCACCACCCCCTGCTGACGGCGGGCCCCGGGGACCTGGGGATCTCGGGGGACCTGGGGCTGGAGGTGGGCCGGCTACCCCAGCAGAGCCGCGAGTGCGGGAGGTCTGGCCACGGGGCCTGATCACCTACGTGACAGTGACAGAGCCGTCGGCGGTGCTGGTGGTCCGTGGCGTGAGGGACCGGCTGGTCATCACCTACCCGCACGAGCACCACACCCTCAAGTCCAGCCGCTTCTACCTGCTCCTGCTGGGTGTGGGAGACCCAAGTGGGCCCAGTGCCAACGGCTCAGCTGACTCGCAGGGCTTGCTGTTCTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCTGTCTTCTTCTCCTGCTTCTTCCTCTTCCTCTCGCTCTGTGTGCTGCTCTGGAAGGCCAAGCAGGCCCTGGACCACCGGCAGGAACAGCGCCGGCACCTGCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACTGTCTGCTTCCCGCCAGACCCTGCTGCCCCAGCCCCCACCTGGAAGCCTGCCGGGCTCCCGCCACCCGCCTTCCGCCGCTCCGAGCCCTTCTTGGCACCCTTGCTGCTGACCGGGGCCGGCGGGCCCTGGGGACCTGTAGGAGGGGGCTGCTGCCCACCGGCCATCCCCACCACCACTGCCGGCCTGCGAGCCGGGCCTATCACCCTTGAGCCCACCGAGGATGGCATGGCCGGCGTGGCCACACTGCTGCTCCAACTGCCTGGCGGGCCCCACGCACCCAACGGCGCCTGCCTGGGGTCAGCGCTCGTCACACTGCGGCACCGGCTGCACGAATACTGCGGCGGCGGCGGGGGCGCTGGGGGCAGTGGGCATGGGGCTGGTGCGGGCCGGAAGGGGCTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACCCTCGGCAGGACCTTCGGCCCCAGCAGTCGAGTCCCCTTAGGGTGGCCGCCCTGGACTTGGGGCCCCTCCAACTGGGACACTGTGTCCTCAGAGACTTCTGGTTTCCTTCCCCTGGGGGGAGGGTCCCCAGACAGAGCCTTCTTTGTTCTGCGTTCAACAATTACTGACTGAATACCTACTACGTGCCAGGCACTGTTGAAGGCACTGGGCGTGAGTAGGAACCAAGACAGTCAAGGTCCCTGATCTCGCGGGATTTTAGGTCCCAGTGCCAGGAGACAGTCGACGTGCGCATGCGCACGCACACGCGTAAATGAGGAAAAGCATGTTGAATCGGGCGAGTGGAGTGAGTTAGCAACGGGATGCGCTTGTGAGGGACCTCGGGGTCGTCAGTTGTTCACTGTGCGAAGCTCGACTTTAAGAAGGAAACCGACTGTGGGAGGACCTGTGGGGAGCGGGATCCAGGCAGAAGGAACTACAAGGACAGAGGCACAGAGGCGGGAAGTGGTTGATGTTACTGAAAAGGGTCGGAAAGCTGGCCAGTGTGACCCTGACCGAATGTGCAGAGGCGGTGGGGTCAGGGTCGAGCAGGGGGCAGATCACCCGGGGCCCACCAACCCCGGGTAGGGCTTAGGGTTTTATTCTCAGGGCATTGGGAAGCCATTGGACAGTCTTCTGAGGGAGAATGACAGGATCCGATGTATTTAAGAGGTCACTCAGCTGTGTGGAGAATAGACTGGAGATGCCGAGAGAAGCCGCAGTGGGGCAGGACCCGAGATGGGCCAGGTCAGGGCAGAGGCTGTGAGAGGAGACTGGGACAGAAGCGGGTGAGTGGAAGGATGTTATGATGGCAAACATGGACATCGGAGTAGGGGAGGGAAGGAGGCCAGGCTGACGCCAGCTTTGTGGCCCAAACTGTGGGCCGAGGTGGGGTTGTTGGTGAAGGTGGGACAGACTGGGGCTGTGGGGGAAGATTAGGAGTCCAGCTTTAGACCTGAGATGCCTTTCAGCGACATCTCTTCAGTCAGGTCCCACCAGGGACACAGCGGCTGCCCTGAGGATCTGGGCAGAGGGGGCTGAGTGTGGGGGTTGGCTCAGTGGTGAAGGAGGGGTGCTGCTGTGAGGAGACTGGAAATGGGGCCGCCCAGTGAGCCAGAGCAAGATGCTGTTTCTGCCACCACGAGGCTGCAGGGACAAGCTCAGGTGGTGGTCCCCGACGTCTGGGCCAGGGTCGCTGCGCTGCCAGGGCGCATGAGGAGACAAAGCCCCTGCCTGAGATACCCTCCTGGGTGAGGTTGTGGGGGGAGGGGGATACCCAGGTTGGGAATAGAAATGACAGTTTTCAACCTATAATTCTCTTCCCAGATGACATTTCCTTGAAGCAGCATCTGGCCTTTCCCCAAGGCCTCCTCTTGCCCCAGCCGCCACCTTGGATTTCTGAGCCCTTCTGTCCCTAGACTGCCCCACCTCCCCCAGTCCTAACCATCTTGAACTTCGGACTCCTCCTTTCCCAAGACTCCACCCCCCAGCTCTTTTTTGGACCTTGGAAAGCAGGGACCCTGTGTCTTCCTATCTGCTGGGGGCCTTTGTCTAAGAGGCTGATCCCTATGTTGCCATCAGAGGCTGTGGGAAATTGGGGGAGCAGTAAAAGCAACAAATAAAGAGTGTGTGAAGA EMBV3_26860 ATTTTAGGCATTCCTGGTGGCTTAGATGGTGGTGAAACTGCTTGCAATAGACCCTGGATC Gene BVV0101_047181 - 1 EMBV3_19140 GK000021.2:6239277-6262123 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20668 TTTCTTCCTGGTCAAATACAAGCCCCTCAAGTACAACAACGTGTACACCTACCCCGCCTG Gene GeneID:616071|LOC616071:XM_002697102:225_cdna Constitutive 0 NULL GeneID:616071 22 GENE LOC616071 NULL similar to gamma-aminobutyric acid (GABA-A) transporter 4 EMBV3_35024 TCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCCTCGGATCGGCCCCGCCGGGGTCGGC Variant GeneID:100337018|LOC100337018:XM_002685423:15_cdna 386^787 1 EMBV3_18054 GeneID:100337018 2 GENE LOC100337018 NULL hypothetical protein LOC100337018 EMBV3_00785 GGGACAGTGAAGGTGTTTAGAAGGAGAGATTGTGGAAGATTCACTGGAGGGAGTTTTAGC Gene BVV0101_044046 + 1 EMBV3_28309 GK000018.2:39486289-39498923 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00864 TTGCCCTAGAATGCTGTAGGGGGTTACCATGTTGAATCTGTGCAGAAGCTCAAAGTGCCG Gene BVV0102_113265 + 0 NULL GK000013.2:61107285-61123466 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043306 TCONS_00043301 TCONS_00043307 TCONS_00043302 TCONS_00043305 TCONS_00043300 TCONS_00043304 1 XLOC_025906 Coding TCONS_00043300 XLOC_025906 Coding Coding CSNK2A1 13:61049512-61109214 = TSS32055 4236 1 TCONS_00043300_2 359 13 0.929264166429373 0.000629848749604739 0.00300453319777324 3.92908424967652e-06 0.00485293219005468 2.29730590960205e-22 0.00124278431013892 0.0052881035046829 0.00701277045604917 0.00453943538164903 0.00126111617107176 0.00144375566238643 1.18619650748717e-11 6.45800348805322e-18 0.000323831716291373 0.00222702518590143 2.4976622173024e-06 0.001315079379179 0.00362874253031395 0.00786357136010552 0.00450065496047075 0.006160314092701 2.29481303391864e-15 1.09048077138195e-08 1.81016246872792e-05 0.00846506050582066 0.0110887352345559 0.0057262226581067 2.76761024576664e-13 0.000168095064395337 4.48475895831024e-20 NM_174635.2 CSNK2A1 Bos taurus casein kinase 2, alpha 1 polypeptide (CSNK2A1), mRNA. 0.0 3368 99.79 0.443342776203966 NM_007788.3 Csnk2a1 Mus musculus casein kinase 2, alpha 1 polypeptide (Csnk2a1), mRNA. 0.0 3927 83.54 0.898961284230406 TCONS_00043300_2 sp|P68399|CSK21_BOVIN CSK21_BOVIN Casein kinase II subunit alpha; 0.0 697 88.24 0.997214484679666 3 coding 0 0 0 0 -0.118530529397876 0.498246470941645 -0.0805484128583694 0.207603594551971 CCGCTGGGGGAGGAGTCGGAAGCGGTCCCTCCCCGCCTCCCGGTCGGAGGGGGGTTTCCGCTTCCGGCAGCGAAGGCTGCAGCCTCGCTCTGGTCCCTGCGGCTGGCGGCCGAGCCGTGTGTCTCCTCCTCCGCCGCCGCCATATTGTCTGTGTGAGGAGAGGGGAGAGCGGCCGCCGCCGCTGCCGCTTCCACCCCAGTTTTGAAGAAAACAGGTCTGAAACAAGGTCTTACTCCCCAGCTGCCTCTCAACACAGTGACTACCAGCTCTCCAGATACCAAGTCCAGCTTTGTCCGCCAACCTGTCTGACATGTCGGGACCCGTGCCAAGCAGAGCCAGAGTTTACACAGATGTTAATACACACAGACCCCGAGAGTACTGGGATTACGAGTCACATGTGGTGGAATGGGAGAAAGATATAGTTGAACCAGTAAAGAAGAAGAAAATCAAGCGTGAAATAAAGATTTTGGAGAATTTGCGAGGCGGTCCCAACATCATCACACTGGCAGACATTGTAAAAGACCCTGTGTCACGAACTCCCGCCTTGGTTTTTGAACACGTAAACAACACAGACTTCAAGCAATTGTACCAGACGTTAACAGACTATGATATTCGATTTTACATGTATGAGATTCTAAAGGCCCTTGATTACTGCCATAGCATGGGGATTATGCACAGAGATGTCAAGCCCCATAATGTCATGATTGATCATGAGCACAGAAAGCTACGGCTAATAGACTGGGGTTTGGCTGAGTTTTACCATCCTGGCCAAGAATATAATGTCCGAGTTGCTTCCCGATATTTCAAAGGTCCTGAGCTACTTGTAGACTATCAGATGTACGATTATAGTTTGGATATGTGGAGCTTGGGTTGTATGCTGGCAAGTATGATCTTCCGGAAGGAGCCATTTTTCCACGGACATGACAATTATGATCAGTTGGTGAGGATAGCCAAGGTTCTGGGGACAGAAGATTTATATGACTATATTGACAAATACAACATTGAATTAGATCCACGTTTCAATGATATCTTGGGCAGACATTCCCGTAAGCGATGGGAACGCTTTGTCCACAGTGAAAACCAGCACCTTGTCAGTCCTGAGGCCTTGGATTTCCTGGACAAGCTGCTGCGATACGACCACCAATCACGGCTCACTGCAAGAGAGGCCATGGAGCACCCTTATTTCTACACTGTTGTGAAGGACCAGGCTCGAATGGGCTCATCTAGCATGCCAGGGGGCAGTACGCCAGTCAGCAGCGCCAATATGATGTCAGGGATTTCTTCAGTGCCAACCCCTTCACCCCTTGGACCTCTGGCGGGCTCACCAGTGATTGCTGCTGCCAACCCCCTTGGGATGCCTGTTCCAGCTGCCGCCGGCGCTCAGCAGTAATGGCCCCTTCTGTCTCCTGATGCCTGAGCAGAGGTTGGGGAGTCCACTCTCTCCCTTGATGCAGCTTGCGCCTGGTGGGGAGGGGTGAAATACTTCAGAAGCACCGTGTCTGAACCGTTGCTTGTGGATTTATAGTAGTTCAGTCATAAAAAAAAAAATTATAATAGGCTGATTTTCTTTTTTTTTCTTTTTTCTTTCTTTCTTTTTTTTTTTAACTCGAACTTTTCATAACTCAGGGGATTCCCTGAAAAATTATCTGCAGGTGGACTATTTCATGGACAAATTTTTTTTCTCCCCTTCCAAATTCAGTTTCTCATCACTAAAGATCAAAGATAAACCAGCCTCAATTCCAGCTGCTGTGTTTGGGTGGAGATTTCTTCCCATGCTCACCATTGCTCCCCTACCATCCCACACTCTGGGGGGGTTGTACTTCACGCTCTTCTCCAGAGATTACAAAAATGTAGCTTCTTCAAGGGAGGTGGGAAGGAAGGAGGAAGGGAGGACCCAACCTATAAGAGCAGTACACTGTTAGTCACTTACATCACTTTACTCCAAAAGTGCTTCAGTGGGGTTATCCTGGTGAATCTAGTGGAAATATGTCTTAGTTACATTGAGATGCTGAAAATCTACCCAAAATGCAGACAGGTCCTGAAAACTTCTGTGCAGTTTGAATCATGTCTTATTGACCTAACCTAAATCCAGCTCATTTATAATTTAGTTTCAGTTTAGTTTAAAACTTTAATATCATCCCTCCCAGATTCCTTACCTTGGTCCTCTGCCTTTCATCTCCCAACATGCTCTATAGCTGGTAGGAGGGGGAAGGTAAAATCTTTTTCAGTTTTCTTTGACTTGGCCCTTTTGAATTCAGTTAGTTATTGGGCATAACTTATTGCTTTTTACAAAAGGAAAAAAAAAACATTGTCTATGTAGGTTTCATGCTAGCAACTCTTTAAGAGCTAATGAGAGATGTGGCCACTGAAGTTTATTTTCAGCTTTCTACCTTCATTTCCTCCTACCTTCCCCTTCCCTCATATGCCATCCAATGAGAAGACCTGCCCCTCAGGTTTATAAACGTATCTGAGTGGTAGGAGCAGAGCCACTATCTCCAGTGAAACTGAAATGGTAGACCTGTAATTGTGGGAAAACTAAACTCTCTTGTTACAGCCCTGCCACCCCTTGCTGTGTGTATATATATAATACTTTGTCCTTCATATGTGAAAGATCCAGTGTTGGAATTCTTTGGTGTAAATAAACGTTTGGTTTTATTTATCAAGGTTAGATTTAAGTTCCCTGTGTAAAGGTCTCGCTGGGTGGGTGTCTCACGTTCACATCTGAAGGGCCTGCAGCCCTGTACCATGGAGGCTTCCCAAGGCCCCCGTTTTTATACACCCCTCGTTCAACCCATGGTACCGGGCAGGGCAGAGAGGCCTTAAAAAAGCACCACAAGCCAAAGTGTCTCTGGGGATTAAGGATCCTTTGCCATAAAATCATTTTGTGTCTCAGCAGTGCAGGGATTGGGGATGGGAGAAGTCGCCAGTTTTTGTGTGTGTGTTTGTGTGTAAAGTGGATTTTCCACTGTAATCCAACCACCTAAGTTTATCAGGTGCTTCACTGAGGAAGCCTAGTTTTTTAAGCACAATAGCAAAATCATCAGCTCTGTATTTTCTCCTGTTATTCCATTACAGTAGCTGCTTGTGGGGACTAGGAAAAATTCTTCCAACATATTTTAAGACCTGAAGTCTTAGTTCCCCATTCTCCTACCTTTATAGATTTACAAGTCTTTCTCACCCGGGCGGCAGAGATAAACATAATTGTTTGAGGAGTTGAATTTAATGAACTTATCTAACTTTGTAACCCATCTTGGCTTTAGTAACTTTATCAAGGTGATGGCTTTAGTGAATATAATGGTAAACTTTAGAGAAAGCTAAAGCCTTCTTTTATAATGTTTCTCCACCATAGGGAAAACATTCTGACTGTGTGGCAGGGTGATTTTCTTCTTTGTGGCCACGTACAGTGGATATTTATTGTTCTTGATCCTTTTTTGCCCTAGAATGCTGTAGGGGGTTACCATGTTGAATCTGTGCAGAAGCTCAAAGTGCCGAATGTGCCAGAGATGCAGTCTGTGATTTCATTTGCACTGGATTATGATTTGAACAGGACTAATGAATTCTTTCTTCTGAAGTGGGGAGGAGGGTTGTAAATCAAGATTTTACATCACGTCCTTATAGCTCAGAGAACAACCTAGGTGTAGCTGAGGCTGATGTGGGAAGCTGCAAATAGCTGGACCTCCTAACATGCATCAGACCTTGAAGGAAGCTGAAGGTGAATGCAGAGGACTCTGAAATGCTACCCAGGAGCCTTTTAAAAGAAATAGAAGTTTTTAAAATGCTACTTAAGGAGTCACTGCAGAAGCATGAAAAATTTAAAAAAGACCCAATTGGGTGGGTGGGAGGGACAAGGGTTTACAGAGTAACAACTTATGTGTTGTTGTAAATTACCTCATCTGTATACCTTGTATTGGGACACTTCATTTCTCAGCACTACCTGTTTGCATTGATTAGATGGCAGGATCTGGAATGCCAATCTCAGACAGTTGTGTTGGCAGTTACTCTGAAAGTTTTGTTGTTTTTTTTTTTTTTAAGTATTTTTTTAACATTGTTTGAAGTGCCCCTCCCCCCACTTTTAAGTTTGAAGTCATAAGTTCCCCCTCCCCACCTCGATGATTTATTGGTTGTAATTGTATTGTTATTGGTATAACGAAAACATAAATTGTGCTGGGAAGAAGTTGTGCCATGAAGGTCTTTAATTTTTTTTTTTTTAAATAAAAAACATTTAAACAAATGAAA EMBV3_42475 GCATTGGAATGGGCAACCTGGGACCTGCAGGCATGGAAGGACCCTTTGGTGGTGGTATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17364 CTATAAGCCTCTTCACTATGTGACCATCATGAGGCCTTGGATGTGCTGCCTTTTGCTGGG Gene GeneID:509515|LOC509515:XM_002683702:8_cdna Constitutive 0 NULL GeneID:509515 9 GENE LOC509515 NULL similar to Olfactory receptor 4C6 (Olfactory receptor OR11-138) EMBV3_12080 GTTATGGTGGCTCCTCTTGCTGCAGAGCACAGGATCTAGGCACACAGGGCTTCAGTAGTT Gene BVV0102_304661 + 0 NULL GK000018.2:46574317-46583849 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35789 AATTGCATTTGGTGTCTCAGATCCTACACAGAGCTGCCTTCGGCCTGTCTTCCTGTTCAG Gene BVV0102_107557 + 1 EMBV3_25373 GK000018.2:59679955-59698287 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087293 TCONS_00087294 TCONS_00087325 2 XLOC_052440 XLOC_052446 Coding TCONS_00087294 XLOC_052440 NonCoding NonCoding LOC617476 18:59571445-59825821 o TSS64846 2884 2 TCONS_00087294_5 83 0.386615811373093 2 0.98867027027027 2.74435931855487e-05 8.42916626352688e-10 0 8.10588397426929e-06 0.000119834413643005 1.24027145289701e-06 3.09543267053255e-05 3.60455162421081e-15 5.84230312366117e-05 1.00283536692451e-05 3.34283467414257e-05 1.71853179080718e-05 8.07610988581216e-13 0.000114414162616625 0 0.00104312544564117 1.86206832603939e-05 3.08055090168809e-12 0.000342300957326392 2.61778723578841e-05 1.52627831882884e-05 0.000135563849199765 0.000285296923371994 0.000115525690401394 6.56571632676901e-06 0.000101241823943485 6.67213760254255e-06 0.000141619333750807 0.000184343475028593 3.20002992994711e-05 XM_003583486.2 LOC100139996 PREDICTED: Bos taurus zinc finger protein 320-like (LOC100139996), 3e-178 630 80.48 0.229195561719834 0 noncoding GAGCTCATTTACAAATTAACCTCAGCAATATTATTTAAAATCTGTCTGGACTTATGCATGTCTCAGTGTGTGTCTTTGATTTTGGATAATATTGCTGAGGTTTATTTGTAAATGAGCTCTTACTCAATTGGCTTTAAAAGAAAGGAAGCACTTGGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCCACCTGCCAGTGCAAAGGACAGGTTCTATCCCTGGTACAGGGAGACTCCACATGCCGCAGAGCAGCTAAGCCCGTACACCACCACCACTGAAGCCCACGTGCTCTAGAGCTCATGGTCCACAAGAGAAGTAGCTACAATGAGAAGCTCATTCACCACAACTAGAGGGTAGTCCCTGCTTGACATAACGAGAGAAAGACAGAGCAGTGATGATGACCCAGTGAAGCCAAAAATAATAAATGAATTAAAAAAAAAAAAAAAACAGTAAGTGCATACAAATCAATTAGAAGGGAAATTAACCTAAATGAATTTCAGGTTCATGTGAACTGGGAAATATTCAATATTAAATATCTAGTATTAATGTTTACTCATCTAATTAAGACTTATCTTGAGTCATCCACATTGTGTAATAATTCTGTTGTGTTACATTGAGAGATTTAGGACTATTGATGAATATGTTTGGTGCTACCCTGAGATGCTCTCTATAAGAAAGCAAATGTTTTTAGAAGTTATCAGTAGTATTTATGTTCACTAATCTAGAAAATGCAATATAAAGCACAGTTCATGGTTGCTTAAGGAAGGTAAGATGTGTGTTTTCAGTGAGAAAGGTGTGAGAAATGAAATTGAGTTTGGATGCTCGTAGCAATGAGTGGAAGCGAGTGGAAGCTGAAAACAAGGTCTTCATTTCCCAGGCCAAGAGTCCTGACCATTGGACCACAGCAGCCAATAATTAGGGCTAAGGTCCCTGGTCTTGCCTGCCTAGTCAAGAAAGAATTCAGATGAAGAGGCACAAGGTAAAGAGTAAAGGAAAATGTTTATTGAAAGGAAAAGTACATGCAGAAAGGCACATGGGCTAGCTCAGAGAGAGAGCCCACCTTTGGTAAGTGTCAGTTCTTTTTAAAGGTACAGTTTTCCAGGTCTTTGTCTCCCCTCGGGCCAGTCACCTTCTTTTGTCCCCTCTGGTTAATTTGTCTCAGGCCCCTCCCCTGGGATGTGAATGCACACCCTAACCAAGCTGTATCTCTAAGTTAAGGAAGGCTTCTGGGAGAAGCAAGACTTGTTATGGCCTGAATTACCCTCTGACTTGACCTCAAGCAACCTTTCTGCACATGTGTAGTCACGTCTCTGTTAATAGACAGGGTTTTTTCCTTTCTTTGTCCTTGCCATGATTATTCCCTTGAAGTAAGAGACAAAGACTGGCTATTTACCCTGTATTTGTTGGCTGTAGATTCCTCAACTGGAGCCCAGCTATCTCTTATCTCAGGGAATGCAGAGAGAAGGGTGACATATTGTAGATATCCAATCTGAAGCCCATCTGTCTCCTACATAAAAATTACGTTTTATTACGGAAAAAGAAATTCGGTCTGACTTACAGGTGGCTGTTTACAAATGAAAAAAGTGATTTAAAAAAAAGGAGAGAGGTTTATGGAAAGTGGATGCCAAGGAAAGAGGTCCCAAAGGGTAGGTCTTTCTATGATCTGTAATTTGACTCCTGTCAATGTTGTTGCTTGACTTTGGGGAGCATGTGATGAGGTGTTTCAAAGGGATCTAATTCCTCTTTGTCCTCCTTCTGTGCTGGATTCCGTGGGATGTCCACTTTTTGGTCCATGTCGAGCAATGGTAACACCTCCAGAGCTGTAATCCTGGAGCCAGCCTGGTTCTCTTCCTATTTGCTGCACTTGGGAGACCTCATTGGAAGAAGGGAAGAGAATGGCCAATCTTTGATTGCATTTGGTGTCTCAGATCCTACACAGAGCTGCCTTCAACCTGTCTTCCTGTTCAGAACCCTCAGCTGTTCCTGTTGTTACTGCTTTTACCACAACCTTCACGGGTGTGTGTAACAGGAATGTGGTTTGGATCTTCTGTGATTGTAACTCAGGAAGCCTGTAAGGACAGTGGACTCTGAGATCTTCTCTTGTATCCCGTCTTGGATATATGAATCAGGCTCCAGGTTCCTTCCGTCCATGCTCATACTGTACAGAATGACCCGTGCTCATCCACTGAACCACATTTTCAGGACACGACTTGATATGTGGGGGGGTGGTACTTGGGAAACCATTTCTAGGTGAGATGGCTGAGTAAGGTTGTTAGTTACACAGATCAGTTCTTGTGTCTCACTTGACCTTATGTTTTTAAAGTCCTGAAGTTTGTTGTAACCTTTTGTAATCTGTTCTGCCTAAGTGGGCCCTCGTGATTAAGAACATGTATGAATTTGTAGGTCTGGGTTTCACTCCTGCTTTGCTCTTTACTTTCATGTGCCATGGAGTTGTGTTCATGAACCCTGGGAATCTACTACCTTTATTTGAAAAATTGAGGTAATTCATGCTTTTAGGTGTCATAGAATTTTGACTGTTTTATTAAAAAGGTCAAAAGTTAACTTTTTTTTTTTTTCCTGAACCATGTGGGAGGCGGGATCTTAGTTCTCCACTCAGGGATGGAATCTCTACCCCCTACAGTGTAATCATTTAATGCTGTCCACTAGACCATCAGGAAATTTGCCTCAAAGGTTACTTTTGCTTAAAATGCATATTTACTTCATGTCATGGTTATTGTGACATGTCTCTTTGTTTGCATTACATCCTGTATATTGTTAGTTTACATTTCATTCTGAATAGTTTGTCTCTGACTCTAATTAGTAAGTTTTCAAATAATATTTCTCTTCTATAGCAGATTCTTTACCTCTCAGATGTAAGAAACGCCC TCONS_00087289 s 3' 2640 TCONS_00087289 s 3' 2640 EMBV3_40238 AGCCAACACTGCACATGCCTCTGAACCCATCCCCCTTTGGCTTGAAAGAAAACCAAACAC Gene BVT0102_037522 + 0 NULL GK000018.2:54535398-54552330 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08212 CGATTCTTACTGCTGTATCCTATGTCTTCATCCTCCAGTCTGTATTCCGCTTGCCATCTC Gene GeneID:526411|LOC526411:XM_002693236:488_cdna Constitutive 0 NULL GeneID:526411 15 GENE LOC526411 NULL similar to olfactory receptor Olr95 EMBV3_11012 ATGGAGACACAAGAACTTAAATGGCAAAAGGGAAAATTTCAACTTGCTACAGAAATAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20489 CACAGTGAAGAAATTCTGTATCCTAGAACTGTACTGCCTCTATGTTTAGAGGTGTAGACC Gene BVV0102_138848 + 0 NULL GK000001.2:134220748-134223423 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002279 TCONS_00002277 TCONS_00002276 TCONS_00002281 1 XLOC_000560 Coding TCONS_00002279 XLOC_000560 Coding Coding MSL2 1:134190225-134223033 = TSS1162 5280 1 TCONS_00002279_4 577 2 0.839119700064011 3.82863206831602e-05 6.11840430750939e-10 9.12689737855034e-09 5.39621869499216e-10 1.88997158392084e-11 2.14636169327714e-09 6.92524863646058e-10 1.62000480334011e-05 3.02474107942555e-05 1.16463146282195e-08 5.61508461646007e-05 3.33632188289722e-05 0.000163515278791548 7.66103282182478e-10 1.5250262388347e-07 3.43782659997383e-05 0.000221935202887084 0.0032497533287817 2.89992857230858e-05 2.88560826303064e-08 1.04300586463319e-11 0.000435008194303771 0.000340295932682803 4.74129258450271e-07 1.35648630637784e-08 4.08969140839879e-22 3.56181379415325e-05 0.000307778989529376 2.16766361385555e-05 0.000265255804009308 XM_003581762.2 MSL2 PREDICTED: Bos taurus male-specific lethal 2 homolog (Drosophila) (MSL2), transcript variant 1, mRNA. 0.0 8581 100.00 0.90094696969697 NM_018133.3 MSL2 Homo sapiens male-specific lethal 2 homolog (Drosophila) (MSL2), 0.0 6587 90.36 0.905681818181818 TCONS_00002279_4 sp|Q9HCI7|MSL2_HUMAN MSL2_HUMAN Male-specific lethal 2 homolog; 0.0 1166 98.79 0.998266897746967 0 coding 0 0 0 0 -0.0839106884074902 0.652166159804786 -0.0365091600649057 0.47174091618181 GCACTTCCTCCCCGGCCCTCCCCTCTCGGGCGGGGGCCTCCCCTAGCCGCTTCGCCACCTCAGGGAACAGCCGGGCTCTAACCGCCGGGGCGGAGAGCCAGGCTCAGTCCGGACCCCGCGTCCGATATGGAGAGAGCGGCGGCGGTCTCCGTCAGCCGCAGCAGCAGCGTTCGCCGCCGCCCCGGCTCGGTGCACTAGATCCAGGAAGCCGACGCCCGCGCTGCCGTCCTTGCCGTCGCCGCTGCCTCCACGCCGGGCGCTGTGATGGAGTAAGGGCCCCGCAACCCGTGAGAAGCGTGCCCGCCTCTCGGACCGGGCCGGGGCCTGCTGCCGCGCCCGCCAGCCCGACCACAGGAGGTGCCTCCGCGTCCAGGGATGCAGCTCGAGCGCAGGCCGCCCGCCGAGCCGTGGGGCTAGACTGAGCGCCGCCTCCGCCGCGTTCTGCGCCCCGCGGCCGCCCGGGACGAACTCGAACGCTGGTTTCTCCCTCGCTCTTTTTTTTTTTTTTCCTACTCGGTCTGCAAGTCTCAGGGACGGAGGAGGGGCGCCAGGGCCCCATGTGTGGGAGGACTGCTTCAGCTCCACAAACTTGTACGGATTTTGGTTACTACTTTGGCCAGTGGTTCTGCCCCGATTTCCTCCGAATTGTTACAAACTCGCTGTTGTTCCCTGGCTGCTTACAAAGTTGGATCCGGAATTTCTCTTCACCCGGGAGCCAACGGTGTCGAAGCGTCTGCAATGAACCCGGTGAATGCTACTGCTCTCTACATTTCCGCGAGCCGCCTAGTGCTCAACTACGACCCCGGAGACCCCAAGGCGTTTACAGAGATTAACAGGCTCTTGCCTTACTTCCGACAGTCCCTCTCGTGCTGCGTTTGCGGACATTTGCTACAAGATCCTATTGCACCCACCAACTCAACCTGCCAACACTATGTCTGCAAAAGTTGTAAAGGCAAGAAAATGATGATGAAACCTTCATGTAGCTGGTGCAAAGACTATGAGCAGTTTGAGGAAAACAAGCAGTTAAGCATCCTAGTGAACTGCTACAAAAAACTATGTGAATATATAACACAGACTGCATTGGCACGGGATATAATAGAAGCAGTCGACTGTTCTTCTGATATTTTGGCTTTGCTTAATGATGGATCCTTGTTTGGTGAGGAGACGGAAAAACCCTCAGATTCATCCTTTACTTTGTGTTTGACACATTCCCCCTTACCTTCAACCTCAGAACCCACAACTGATCCTCAAGCTAGTTTATCTCCAATATCTGAAAGCACCCTCAGCATTGCTATTGGCAGTTCTGTTATCAATGGTTTGCCTACTTACAATGGGCTTTCAATAGATAGATTTGGTATAAATATTCCTTCACCTGAACATTCAAATACGATTGATGTATGTAACACTGTTGACATAAAAACTGAAGATCTGTCTGACAGTTTGCCACCTGTCTGTGACACGGTAGCCTCTGACTTATGTTCCACAGGCATTGATATTTGCAGTTTCAGTGAAGATATAAAACCTGGTGACTCTCTGTTATTGAGTGTTGAGGAAGTACTCCGCAGCTTAGAAACTGTTTCAAACACAGAAGTTTGTTGCCCTAATTTGCAGCCCAACTTGGAAGCCACTGTATCCAATGGACCGTTTCTGCAGCTTTCTTCCCAGTCTCTTAGCCATAATGTTTTTATGTCCACCAGTCCTGCACTTCATGGGTTATCGTGTACAGCAGCAACTCCGAAGGTAGCAAAACTGAATAGAAAACGATCCAGGTCAGAAAGCGACAGTGAGAAAGTTCAACCACTTCCAATTTCTACCATTATCCGAGGCCCAACATTGGGGGCATCTGCTCCTGTGACAGTGAAACGGGAGAGCAAAATTTCTCTTCAGCCTATAGCAACTGTTCCCAATGGAGGCACAACACCCAAAATCAGCAAAACTGTGCTTTTATCTACTAAAAGCATGAAAAAGAGTCATGAACATGGATCCAAGAAATCTCACTCTAAAACCAAGCCAGGTATTCTTAAAAAAGACAAAACAGTAAAGGAAAAGATTCCCAGTCATCATTTTATGCCAGGAAGTCCTACCAAGACTGTGTATAAAAAGCCCCAGGAAAAGAAAGGATGTAAATGTGGGCGTGCTACTCAAAATCCAAGTGTTCTTACATGCCGCGGCCAACGCTGCCCTTGCTACTCTAACCGCAAAGCCTGCTTAGATTGTATATGTCGTGGCTGCCAAAACTCCTATATGGCCAATGGGGAGAAGAAGCTGGAGGCATTTGCTGTGCCAGAAAAGGCTTTGGAGCAGACCAGGCTCACTTTGGGCATTAATGTGACTAGCATTGCTGTGCGCAATGCTAGTACCAGCACCAGTGTAATTAATGTCACAGGGTCCCCAGTAACGACGTTTTTAGCTGCCAGTACACATGATGATAAAAGTTTGGATGAAGCTATAGACATGAGATTCGACTGTTAAATCAGTGGGTCTTTAAACCTACCTCTGGTAGGAAAATAGCTACAGTTTTACGGCAGCTATGGTTTTGTTGGTTTAACTTGCCGGAGCTCCTGCATATAGATCACTTGTATCAAGTGTTTTCATTGCTAAGTTATATGTGTTAGTGTCGGGGAAATAGTTTGCAGATAATGGAGGAGTAACCCTACAACTATATGTCCTTAGTTCTTACAGAACCTCATAGTTTGAGAACAAATGCTGATGCAACTGATTTATACAAAATGAACTTTGGCAAGGAAAATAACATTAACCTCATTGTTTATGGTCATGCTTTGTGCATAATCAAAGTTTATGATTAAATGTAAGGAAGTGGTATCTAGTCAGTCCATAAGGATTGTGCTCATATTTTGTGGAAAAGTAGCCATTAGTTTGTTCAGGAGACTCAGTGCTACCTTCAGATGCCATTGATGTTTCTCCTGTTGAAAAGCTGATGTGTCCAGCTCAACCTTTGTACTGACATAATACCATTTCTGATCATGAAAATTGGCTACTGGTGTATGTAGCAGTTTTTAAATCAGCAGTATTATGAAAGAAAATTTGCCCCTCATTAGAATGTTGAAAAAAATCTGTCTTTTAAAAGTGAACAAACTGAAATTCTGTCAGACTGTGGATGTTTAAGCTGTTCATGCCACAAAACTCTTCTGAGTTGAATCCCATTTTTAGTTAAGTCTGACTCATTTCTAGGGGAAAAACTCTAAATCTTTCCTTCACTTTGAGCAATGTTCTGATTAGATAAATGAAGTGGAGAAGAGTAGTTTTATTCTGAAGGTAATTGAATTTAGACTATACTATGTGACAGAATTTTAAAAAATTATACAAATGTTTTATTTAGAAATTGGGATTTACTTAAAATAATTTTGGAATAATGCTCCAAAACTTACTCAGATTTATGCACTATACCTATTGCCACTGGCCACTTCAAAGTGATTTTTTGTTTCCTCTAATAGTTTGCCGCAGACTTTAGTTTGGAGATGCTTTTTCCTTTTTTTTTTTTTTTTTTTAATAGGGTGCTATTTGTTGTGGAGACTTCTTTATAGAGGCCTAATAAAAATGCCTTTTTATGAAGCCTGTGCATTTAGGTAGGTTTGAAGCTAGTTGGATTTTCTTTAGAATACTCTTTTGCATGTAAAGCACAAACTATGTTTCAGTTTAAATCCTTGTCTTCCCTGTAATTTTTATGGGGGAGGTAAGTGAGTCACAAACATTCTTTTGAAGGGAAATCTAGTCAGTTGCTTGAAATAGCACACACAGCCCAAATAAAACAAGGACTGACTAGGTTGTAAAGCAATGACCTTATGATTTAAAAGAAGAGTTGCTGCTTTGACAGTGCTTATTTAAAGAAAAATACTGCTGGAAAATTTTCAGTTTCTACTACGTTCACCATCTTTTCTGAGATCTGACATATGCTGAAGTTATGTTTTGATTTGGCACACAGCATGTTCAATGATGGTTACTCACTTAGTACAAGACATGGAGAAGAACCCTTTGGACACAGAGCAGATGACACCTCCTTCTGTTTTGTAGTGTATCCTGGTGTCATTTTCTGTGAATGTGGTCAGGTAGAGTTGTTTTTGTTGTTGTTGGGCTTTTTTTTTTTTTTTTTTTGTCTCTTTTGGTGGGGTGGGGGTGGGCTAAAGCCATAGGAAGAAAAATGTGATGTATGTGTCCAGTATGTACTATTTTGTTTTTGTTTTGCAAGAAGAGTTGAACTATTTTTGATAACAAGAGTAAATGGTGGAAAATGCTTCTTAGTTGTCTTGTCTTTATTTGCTTTCCAAGTTTTGGAATTTTATTTAATTCCTCTGAGTGTTAGCAGTGTCTTATGAAACATGTATTTGCCTAAAGTTTGTAACAGTTTTACGTTGGATGCAGATGCCCTGCTATATAAACTTGTAAATCTGTTCTTTATTCACTAATGATCACTGCAAAAATGACTAGAAATAACGAGATTGTACACATGGATGATTAGAATATATTTTGCAAATCTCCCAAAGTTTCCTAATATTATGATCTTAAAATTCCTTGAGTACTTTATTGCTTCCCAAGTTTGATAATCTTAGTTTCGTGTTTTTTGATGCATGGGAGGTTGGCAATATAGACAAAGTGAAAATCATTAGTATGTGAGGGCCTTGATTGTTATGTAATATTGCCAATGATGAATTCAGGTTGTTTTTAGCACAAGTTTCTCTTTTTTATGCTGGTATTCTCACTGCCACACTTTTGGAAACCTGTATTACACCTTAAATCTATCAATAAATGTTAGTTTTCTAATTCTATGTTGTAGAATACTGAGGAGTTTGGGATAGCATGCTTTGAATGGCCTGTATTATATACGTTTGGGGAAGAGTAATTAATTACTGTGCCTTGATTTTTATGTTGTTTTTCTTTATATGGTGAATTATTTTTAGGAATGCTGACCAATGGCTAACAATGGATAATTGAGAAATTATTACTGAAGTAATTGGATTTACTTCAACAGGATTTAAAAGCACCAAAACAATAACAGCATTTAATATGACTCATCTTCATTTGTTTTTTTTGATTCCTTGTAATTACCATAAGTGATCCAATGATCTTTCACCTTAGGTAATAGACGTTTTACAGCTGACAGTTGTAGAACTAATCGTTTTGATTAGTTTCCATAGGTCTACACCTCTAAACATAGAGGCAGTACAGTTCTAGGATACAGAATTTCTTCACTGTGTTCTTAGTTTTCTTAAAACAACTTGATGGTGACTAAAGCAAAGTAAAAGTTTCATAACAGATGAAAAA EMBV3_04098 CCCCTACGAGAAAAAGATCTCGGCGATCAGGGACCAACTGGATGATTGAGATCCTGAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04003 TGAAGCCAGGACTGCAGAGCAGGAACAGCTTACTGCCACAAGCCAAATACTATTCAAGGC Gene GeneID:768017|MGC137061:NM_001077076:23_cdna Constitutive 1 NULL GeneID:768017 15 GENE MGC137061 NULL hypothetical protein MGC137061 EMBV3_11369 TTGCCAAGGACTGTGACCTTCAGGAGGATGCCTGGCCCGCGACTGCGACCACGCCGACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37575 CAGAGACTGTCCCTCAACTGGTGTGTAGATAAACTGTGGTATACCCATACAAGGGAATCC Gene BVV0101_005050 + 0 NULL GK000030.2:60666793-60726634 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244553 TCONS_00244542 TCONS_00244551 TCONS_00244550 TCONS_00244552 1 XLOC_150489 Coding TCONS_00244552 XLOC_150489 Coding Coding RBM41 X:60597871-60673861 j TSS183774 2041 1 TCONS_00244552_2 413 0.207251347378736 8 0.973246127729013 0.000739972481782532 4.65257023057941e-07 1.93886080313304e-16 7.23743992980005e-05 6.70822403038209e-18 0.000151915540576403 5.63260942081058e-05 0.000216462771195627 0.000134061847790441 2.63457646736719e-32 8.89862388711928e-54 3.48613541583982e-05 3.53225993228502e-05 1.95193146140745e-05 1.70465011916509e-09 0.000463114594722193 0.00067512591660484 4.83138359506717e-46 0.000229391416998303 0.000127343618988059 1.46093306970467e-14 0.00022084494470498 1.69165275733778e-05 0.000699465963543517 6.07319216070212e-06 4.77580095413566e-05 5.28600157370782e-09 0.000303595262192109 6.05154536319108e-05 3.33221311444688e-08 XM_005200663.1 RBM41 PREDICTED: Bos taurus RNA binding motif protein 41 (RBM41), 0.0 2318 100.00 0.629103380695737 NM_018301.3 RBM41 Homo sapiens RNA binding motif protein 41 (RBM41), transcript 0.0 1997 93.89 0.640862322390985 TCONS_00244552_2 sp|Q96IZ5|RBM41_HUMAN RBM41_HUMAN RNA-binding protein 41; 0.0 813 95.40 0.997578692493947 2 coding 0 0 1 0 0.353372677000185 0.181189081505193 -0.00477878862604134 0.939524612255762 GACTTGAAGTCCGCGGCCTGTTTTACCCAAGTTAGATCTAGGGGCCTTTGGAAACATGAAGAGGGTAAATAGCTGTGTCAAGAGTGATGAGCATGTCCTGGAGGAGCTGGAAACAGAAGGGGAGAGGCAGCTGAAAAGCCTCCTTCAACATCAACTGGATACCTCTGTCTCCATTGAGGAATGTGTATCTAAGAAAGAGAGCTTTGCTCCTGGTACTATGTATAAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACTTTGTCCCAGTTCCAGACACTGCATGAGAAGGACCAGGAGACTGCTTCTCTCAGGGAACTGGGGCTTAATGAAACAGAAATCTTGATTTGGAAGAGCCATGTTTCAGGTGAAAAGAGAGCGAGACTTAGGGCAACCCCTGAAGCAATACAGAACCGTCTTCAAGATATTGAGGAAAGGATCTCAGAGCGTCAGCGCATCCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCGAGAAATGGAAATAGAAAATTCTTTATTTCAGGGAGCTGATCGTCACTCTTTCCTCAAGGCTCTTTATTACCAAGATGAACCCCAAAAGAAGAACAAAGGTGATCCCATGAACAAGCTGGAAAGTTTTTACCAAGAGATGATAATGAAAAAACGTCTTGAAGAGTTCCAACTAATGAGAGGTGAACCCTTTGCTTCCCACTCACTGGTCTCAGCTACATCAGTGGGAGATAGTGGCACAGCTGAGAACCCGTCATTACTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGTCCCAGTCTCCATGTGGCAAAAGTTATTGATAATTCACCTGAGCAGTGTTGGACTGGGCCTAAGAAGCTGACGCAGCCAATAGAATTTGTCCCAGAAGATGAGATCCAGAGAAATCGTTTGTCAGAGGAGGAGATCCGAAAAATTCCTATGTTTTCTTCATATAATCCAGGGGAGCCAAACAAGGTGTTATACCTGAAGAACCTTAGCCCTCGGGTGACTGAAAGAGATCTTGTCTCATTATTCGCTCGGTTCCAGGAAAAGAAAGGACCTCCAATTCAATTCCGAATGATGACTGGACGAATGAGGGGGCAGGCTTTTATCACTTTTCCCAATACAGAAATAGCATGGCAAGCATTGCGTCTAGTAAATGGATATAAGCTACGTGGGAAAATATTGGTGATAGAATTTGGAAAGAACAAAAAGCAACGGCCAGATCTCCAGGCTGCTTCTCTAATATCATCTACTACAGATAATACTACTGAAATCAGTGGCAGTTAGAAGATACAAAAAGTAATATTTGTCAGGCCTGCTCTGAGGATATCATCTAACTATACTCAGGAAAAACATCTATTCCTTTGATAAACTGCTCACTTTGGATTAACTCTAATTTTAAATATAGTTTAAAGGACAAGAAGTAAGTTATCCTGGTATAACCTTTTGCACATGTTACCTAGGAGCATACTTCTAAGGTGGACTTTGCAGAAGAAACTTCTTCCTGTTGTATAAAATCTCACCGCTGCCCTTTACTAGACCTACAGACCATTAACAATAAGGGAAAATAAAAACAGAGACTGTCCCTCAACTGGTGTGTAGATAAACTGTGGTATACCCATACAAGGGAATCCTACTCAGCAATAAAAACTATGATGAGCTATATGATACATGCAACAGCTTGGATAGAGTTCACATGCATTTTGCTAAGTAAAAGAGCCAAACTCAAAAGGCTACTTACTGTTAGATTCCATTTATATAACATTCTGAAAAGGACAAAACTATGGAACAGAACAAGTTAGTGGATGACGGGTTAAAAATAAGAGAGTAGCACAAGGAATTTATTTAATAATGGAAATTTTCTGTATCTTGATTATAATTACATGAGTGTATGCATTTGTGATAACTCCTAGAATTGTACACCAGAATGGTAACTCCTAGAATTGTACACCAGAATGGATGAATTTTACTGTATGTAAATGTTTAAATAAATGTAACTTTTAATGGAGGAAAGAAAGTTTCTTAAAGTCA EMBV3_24623 GGCAGGAAGAAGCTTGGAAGGCGGTAGTGCTTTATTCACTGTGGAAACGGCGGCATTGTT Gene BVT0102_086129 + 0 NULL GK000007.2:109335992-109541438 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36238 AGTGAGGCGTTTGATTCTGCCCGCAGGGCTGTGCCAAGGCAATCAGATGTTTATGAAAGC Gene GeneID:286842|BASP1:NM_174780:5_cdna Constitutive 0 NULL GeneID:286842 20 GENE BASP1 NAP22 brain abundant, membrane attached signal protein 1 EMBV3_03396 GCTGAGGACTACGCCAAGAAGCTGAGACAGGAGCGGGAGAAAATTGTGGCCCCCATCAGT Variant GeneID:616120|PGLS:NM_001038580:122_cdna 440^541 1 EMBV3_43714 GeneID:616120 7 GENE PGLS MGC134520 6-phosphogluconolactonase EMBV3_09017 CCTCCGATGGAAGCTTGAAATAGTAGGAGCTCAAACCACGGAATGGAGGCAGTTTCTTCC Gene BVV0102_425120 + 1 EMBV3_14867 GK000023.2:24547782-24588031 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09679 GGCCCCGATTCTTTTGCTTGTGCTGCCAGAGACTTCTGGGAAAGATCCTGATGACTATCC Variant GeneID:534611|NME7:NM_001015656:105_cdna 678^786 2 EMBV3_30101 GeneID:534611 16 GENE NME7 MGC133731 non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) EMBV3_23536 CTCAGGAGGTGTGCGCAACTACGGCTACCGCCACAACGCAGAAGAACGTTACGATGCCTT Gene GeneID:539254|HAPLN4:XM_002688535:133_cdna Constitutive 0 NULL GeneID:539254 7 GENE HAPLN4 NULL hyaluronan and proteoglycan link protein 4 EMBV3_28760 CTTGGATTTCTGTGGCCCCAATGTTGTCGCCCATTTCTTCTGTGAGGTCCCTCCTCTACT Gene GeneID:520012|LOC520012:XM_002698976:141_cdna Constitutive 0 NULL GeneID:520012 28 GENE LOC520012 NULL similar to olfactory receptor, family 13, subfamily A, member 1 EMBV3_36420 CGCTGGATGGCACTGATGTTCTCTTCACCGGACTTTGCCGTCTCCACGGTGCCCGTCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18826 TGCTAAAGAACTTGGTATCTCTGTTAAAGTACAAGATTAGAACAGTTGCCAGAACACATC Variant GeneID:515885|MRPS10:NM_001035314:285_cdna 336^534 1 EMBV3_27576 GeneID:515885 23 GENE MRPS10 MGC128092 mitochondrial ribosomal protein S10 EMBV3_40805 CTTTATGGCTCCTTTTGAGGATGAAGCTGGGTTTTTGGGCATCAGGGAATAGGTAAGGCC Gene BVT0102_060349 + 1 EMBV3_23041 GK000030.2:137145421-137203201 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13216 GCCCACACGTCCCGCTCGTCGCCGGCTACGCTGCAGTGGCTCCTGGATAATTACGAGACC Variant GeneID:534475|RFX2:NM_001102172:69_cdna 548^622 2 EMBV3_22667 GeneID:534475 7 GENE RFX2 MGC148739 regulatory factor X, 2 (influences HLA class II expression) EMBV3_31483 TCAAGCTCCCACAATGTCTCAGGCTCCCTCTGTTGCTTTGCACTCTCCTCCAGTTGCTTT Gene GeneID:540546|KRT6C:XM_002687250:89_cdna Constitutive 0 NULL GeneID:540546 5 GENE KRT6C NULL keratin 6C EMBV3_32907 GAGGAGCACGAGGATCGTGGGAGCTAAGAAATATCCTTCTTTCCAGAGTCAGGACAGCCA Variant GeneID:533884|ZNF512:NM_001083472:171_cdna 136^982 1 EMBV3_16616 GeneID:533884 11 GENE ZNF512 MGC142837 zinc finger protein 512 EMBV3_14196 GATCTTGTATAGTCAACCGTATCTGCAGTAGAGGCCCCCTCCGCTTATTCTCCATCGAAT Gene BVV0102_175262 + 0 NULL GK000022.2:43416191-43461213 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131165 1 XLOC_079870 NonCoding TCONS_00131165 XLOC_079870 NonCoding NonCoding - 22:43423329-43424610 - TSS98032 1281 1 TCONS_00131165_2 107 0.385636221701795 1 0 9.55903293169455e-05 0.000205069104069908 7.22404401604223e-06 1.29651102760509e-05 2.69790987723472e-05 0 0 4.61725931019368e-06 0.000227896938708917 3.29223628838982e-05 0.000186744639886399 1.86088297569667e-06 0 3.67212255858639e-06 0 0 0 0 0 0.000239294016388633 0.000154037979840862 0 0 0 2.16345783420306e-05 1.64999317448152e-05 4.57388957469045e-06 7.49818483887253e-06 3.7896983886435e-06 4.69340069853131e-06 XM_005212209.1 C10H14orf1 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf1 (C10H14orf1), transcript variant X1, mRNA. 1e-114 417 93.80 0.209992193598751 0 noncoding CATCCTGGCTCCGCGGCGGTCCTGAAGCCCCGCCCCGACGCCCGATCCCGCCCCCGAAGCTCGGGCCCAAGACCCACGTGCTCCGCCCAGAATTCGCCCGACGTCCCGCCTCCGCCCGCACTGGGGGATCTGCCCAGCCCCCGGCACTTTTCGCTAGGACTCAAGCCTAGTTTCTCCTGTCATTTTACTTAAGGGACCCCGACCAAGTGCCAGGCCTGGCGAGTAAAGCGGTCACCAAGAAGGAGGGGCTTCCTAATGAAAGGAGAAACATTAAAGACCCAAGTAAACAGCCGACAAAACAATGACCACACAAAAAAAGTTATGATTATAAAATGTTGGGAGGTACATGAATTCGATGGAGAATAAGCGGAGGGGGCCTCTGCTGCAGATACGGTTGACTATACAAGATCTGGACTCTGGGACTGTGGTCCCAGGACTCCTGGCCTTGCCCTCTGTGGGATTGATAAGGTCACCTCTCCAGTCTTTTGTGGGCGGAGTAGGGAAAGACAGCCAGCTGGAGAGAAGGGCAGCAGAGGAAACGACCAGTGCAAAGGCTCTGAGGATTGAAGGAGCCAGCCCGAGAGGAAGCTGGCACCAATACTGTCCTCATTTCACCACGAAGGAAGCCAAGGCTGCAAGAGTGGGGAATTACCTAAAGTCTCTGAGCTAATTGGTTTCCAAACATAGATTCCTTCCAAACGGAACTCACTTCCGGCTAACCAAATCCCCATCCCTTTCCATGTGAGATCAGGTATAGGGTTTTTGCCATTTCTCCTTCACAATAAGCAAGAGAGTTCCAGAGAAACATCTATTTCTGCTTTATTGACTATGCCAAACCCTTTGACTGTGTGGATCACAATAAACTGTGGAAAATTCTGAAAGAGATGGGAATAACAGACCGACCTGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGGCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATCCCAGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGACGGAGGAGCCCGGTGGGCTGCCATCTATGGGGTCGCACAGAGTCGGACACAACTGGAGCGACCTAGCAGCTGCAGCAGAGTACATCATGAGAAACGCTGGGCTGGATGAAGCACAAGCTAGAATCAAGATTGCTGGGAGAAACATCAATAACTCAGATATGCAGATGACACCACC TCONS_00128593 . 5' 51 TCONS_00128593 . 5' 51 EMBV3_03227 TTTCGACCTAGAAGAGTGGTAAGTGCCGTTGCGAGCCCTCGAACTGGACAAGAACAGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13398 ATGGTCAGCTCCTGTTGTGGCTCCATCTGTTCTGACCAGGGCTGTGGCCAACAGACCTGC Gene GeneID:788196|KRTAP4-1:XM_002696017:446_cdna Constitutive 0 NULL GeneID:788196 19 GENE KRTAP4-1 NULL similar to keratin associated protein 4 family member EMBV3_42933 CTACTCAGCACCTACTGGATAGTAATGCCTACTGTTCTGGGGACTTTTCTGGTGGTGCAG Gene BVT0102_184060 + 0 NULL GK000001.2:3122614-3483532 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35376 CCAATGGCCTCTACTCCACCGAGTACATCCACTCCTCCTTTTCGGGATTCTTGCTATGTC Gene GeneID:539415|COL8A2:XM_002686474:530_cdna Constitutive 0 NULL GeneID:539415 3 GENE COL8A2 NULL collagen, type VIII, alpha 2 EMBV3_29913 TCAACGCTGCATGAGGCACCACTATGTTGATTCTATCAGTCACCCGCTATACAAGTGTAG Gene GeneID:511596|NDP:NM_001046090:22_cdna UTR3_Alt 2 NULL GeneID:511596 X GENE NDP MGC137650 Norrie disease (pseudoglioma) EMBV3_01970 CCAGAAAGCCTTCTACCATCCGAGTCATGAAATCCCAGAGCTGTTATCCTGGCTAAAACA Variant GeneID:508929|AADAT:NM_001015551:2_cdna 226^394 1 EMBV3_02136 GeneID:508929 8 GENE AADAT MGC133944 aminoadipate aminotransferase EMBV3_36446 AACCACGCCATTGTGCAGACCCTGGTCAACTCTGTCAATTCCAGTATCCCCAAAGCCTGT Gene GeneID:407216|BMP4:NM_001045877:24_cdna Constitutive 0 NULL GeneID:407216 10 GENE BMP4 MGC127497 bone morphogenetic protein 4 EMBV3_08617 CTACAATCTCACCGCTCTACCTGCTTTTCCCCACTGCCTGACATCTATGGGCCAAAACCT Gene GeneID:510079|LOC510079:XM_002688927:109_cdna Constitutive 0 NULL GeneID:510079 7 GENE LOC510079 NULL similar to hCG1811317 EMBV3_24493 GCTTTAATGCCATTTGGGCAGGTAAGCTTCTGCGCCTCTGTTGTGCTCAGCTGTATTCTC Gene BVT0102_147474 + 0 NULL GK000019.2:18028445-18035609 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098967 1 XLOC_059211 NonCoding TCONS_00098967 XLOC_059211 NonCoding NonCoding - 19:18029822-18031156 - TSS73343 1334 1 TCONS_00098967_4 141 1 0 0.00971981881603166 0.0111933779584931 0.00717635270383561 0.00442597922168234 0.00495938789930356 0.00147211673424155 0.0027060197681658 0.00336084133287275 0.00540007724466408 0.00124915440742197 0.00131276297786613 0.000190310003566153 0.000782921266393083 0.00321592192761752 0.00147480237533114 0.00645442261350423 0.00527687258343244 0.00449529730121962 0.00729994686834674 0.0119003629248152 0.00701130421083678 0.00581304727960138 0.00213190075213257 0.00355650314085964 0.0151553880755338 0.0137106623160866 0.00953538654368855 0.0011808436978925 0.000167399968311385 0.000229853239787892 NM_001270482.1 PSMD11 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 (PSMD11), transcript variant 1, mRNA. 0.0 1445 83.40 0.997001499250375 0 noncoding 0 0 0 0 0.868153587597096 0.154352418791321 -0.285129316513945 0.00200140563579185 NNTATTCTAAATAAAAGGAAAAAGGCTTACACTACCTAAAGCTGTGCTCTCTGCCTCCCGGGAGAGGGCCGCAAGCCAGGCGCTCCACCAGCCACCGGGGCTCCTAACCCACCCGCTGGGCGTCACCTTGCCTCCTCTTCCGAATTGGGTGTTTGCCTGACCATCAAAGCAACGACTTTTTATTCTGTTTGTACCGAACCAAAACAAACAACTGTGTATAGACTGCTCTTTTCTTTTTTATTTGAAAATGAGGCGTTTCGGTGTTCTGTCCCCTGCCATACGGCCTGTCCGCCTGCCCTTCCCCAACAGTGGCCCCAGCAGACTGGCCGAAGGTCCCGCCGCCGCCACTGCAGCAGCAGCAGCAGCGCCTGCACGGCTCCGCTCAACCCTGGAAGGAATGGGACGTGGCCGGGAGCTCGTGCCCACCGTGGCCACACGGGGAGCAGTGTGGGCCCTCAGGGGCCTGCTGTGCATGTGGCTCTTTTTAACACAGTAAACTAGATTAGACGTCAGTGTTTTAATTGCCCCCCTCCTCTGCTCTTTTCTGTCTCTCCCTCCTTCCTGCCCCCACCCTCCCCAGCCAGATGACCACCCCATGTCTCCCTCCCTTCCTCCTCTGCCCCCAGGGGAGTCCGGCTGTCTGAAACCCTTCAGCTTCTCTCCCTGTCCCACCGCTCCTCTCCTGCTGTCAGATGGATTTATTCCTTTTTTAAACAGTGAACGTTGGAAATGAGACTGTGGGGTGTGGGTTTTTTTTTTCCTCCTCTTAATTTTCGTTGTTGGGTTTTTGAGCAACCTCATGTCCCCCTCCCAGGGAGCGTCTTTATTTACCTCTTAGAAATGGGACGGATGGGAGGTAGAGCACTGTTTTCCGCATGCTTTGTCTTACGATGAGATTATATAGCAAGGCTTTAATGCCATTTGGGCAGGTAAGCTTCTGCGCCTCTGTTGTGCTCAGCTGTATTCTCTTCTTCCTCTCATTTCCTCTCTCCCCTCTTTTTTCCTCTCCCCTTCCTGCCTCCTTCCTTCTTGCTGCCTTCCTTTTATCTTTCTTTCCCTTTCTCAGATTATCCTTCCAGGTTTTCGTAATAAATTTATATTTTGTAAAAGGATTTTGTTGTACCAGGTTTTGCATCCTCACTGAATCTGACTGGCTTTTATTTTCCTCTCCAGAATCAGGTTTTTGTTCTCACCATCTTTCCCCATCATGTCCAGTCACTGTTTTGGTTTTGGCACCATCAATATCAAATGTACAAACGGTTCTTGCTAACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATAAAAACAATTTTTTTTTTTCAAAAA TCONS_00095371 . 5' 1379 TCONS_00095371 . 5' 1379 EMBV3_19955 GGATCAGGGTCCTCATCATAAGCAGTGCCTTGTAAAATTGCTGTAAGACTGAAGTGGAGG Gene GeneID:618035|RAB27A:NM_001101270:7_cdna UTR3_Alt 2 NULL GeneID:618035 10 GENE RAB27A NULL RAB27A, member RAS oncogene family EMBV3_39316 AGTGTCTCTGCAGGTGGCTCCAAAGCCGCAGCAATGTCTTCAAAGGGAACTGTGCCAAAT Gene GeneID:616666|SAGE1:XM_002699602:118_cdna Constitutive 0 NULL GeneID:616666 X GENE SAGE1 NULL sarcoma antigen 1 EMBV3_38291 GGGGCAAATCAAGTACTTCAGGGTTGATTTTTACGAAGCCATGGACGACTACACATCTGC Gene GeneID:525750|TTC32:XM_002691472:343_cdna Constitutive 1 NULL GeneID:525750 11 GENE TTC32 NULL tetratricopeptide repeat domain 32 EMBV3_20700 GATGACACTCAAGGGACTTCCGAGCACCTACAACAAGGACTTACAGGAAGACAAGGAAGC Gene GeneID:512771|ASL:NM_001034428:308_cdna Constitutive 0 NULL GeneID:512771 25 GENE ASL ASAL MGC127503 argininosuccinate lyase EMBV3_06992 GTCTCTGCTGCCTTTTGGATCCGATTCTCTATTACTTCATGGCCTCAGAGTTTCGTGACC Gene GeneID:515172|P2RY10:NM_001075699:2_cdna Constitutive 0 NULL GeneID:515172 X GENE P2RY10 NULL purinergic receptor P2Y, G-protein coupled, 10 EMBV3_03656 CTCAAACTTTGGGAGAAAGAAAAGGAAACACATGAGAAATTTTCAGCAATTATCCCTAGC Gene GeneID:536020|CACHD1:XM_002686328:111_cdna Constitutive 2 NULL GeneID:536020 3 GENE CACHD1 NULL cache domain containing 1 EMBV3_15002 AGCTTGTTATTATCTACCTATACAATTCAGCCTTTCTACGCCGGGTGCCCCGCTCCAGAG Gene GeneID:518422|SLC7A13:XM_002692831:186_cdna Constitutive 0 NULL GeneID:518422 14 GENE SLC7A13 NULL solute carrier family 7, (cationic amino acid transporter, y+ system) member 13 EMBV3_07551 CCCCCATATCAAGTGGAAAACTGTAAAGGCAAAGAGGGGAGTGCACTGAGCCATGTACGC Gene GeneID:538005|LSM12:NM_001076098:263_cdna UTR3_Alt 2 NULL GeneID:538005 19 GENE LSM12 MGC142622 LSM12 homolog (S. cerevisiae) EMBV3_12057 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23066 GGAACAAAACTACCGACCAGTGTTGCTGAGAGACATGCGGAACATGAGAGTGCAAAGCAC Gene GeneID:518886|LOC518886:XM_002690075:12_cdna Constitutive 1 NULL GeneID:518886 9 GENE LOC518886 NULL hypothetical LOC518886 EMBV3_20404 CCTCCAGCTTGGCTCTTCCCACTCTTTCATCGTCATGGAACCTTGTATCCCATTTGCCCA Gene BVT0102_111677 + 0 NULL GK000025.2:27341961-27343999 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144966 TCONS_00144964 1 XLOC_088699 Coding TCONS_00144966 XLOC_088699 Coding Coding FBXL19 25:27335782-27349045 j TSS108733 4782 2 TCONS_00144966_8 291 6 0.639873322274167 0.00170485642672586 0.000777096010272879 0.00141105495205341 0.000602528577045825 0.000774592711047074 0.000306627624856974 0.000572124520797871 0.000847480022899619 0.001042502291745 9.07465403337377e-05 2.39388682447281e-05 7.43998337364253e-05 0.000231922335375986 0.000305753748110222 5.4192788739574e-05 0.0011934950273068 0.000252512166270652 0.000564693480920014 0.00083574983647976 0.00119272971477353 0.000300514400988687 0.000436708598285104 0.000314669200792093 0.000358873576403458 0.00165946239282717 0.000880366433004372 0.000873673182862458 0.000117871970197798 0.000256344204171895 0.000149613998576502 XM_002703117.3 FBXL19 PREDICTED: Bos taurus F-box and leucine-rich repeat protein 19 (FBXL19), mRNA. 0.0 4170 100.00 0.483270598076119 NM_001099784.2 FBXL19 Homo sapiens F-box and leucine-rich repeat protein 19 (FBXL19), 0.0 2590 85.73 0.483270598076119 TCONS_00144966_8 sp|Q6P8G8|ORAI3_MOUSE ORAI3_MOUSE Protein orai-3; 0.0 512 88.40 0.996563573883162 4 coding 0 0 0 0 -0.0262351699429431 0.955456287887384 -0.0219445331702978 0.65173119347708 GGGATGGGCTTGCCAAAGATCTCACATCCAATTAGTGATGGAGTTGAACCCCAAACCCAGTGTTCTTGGCCTGGGTCCTGGGGCTTCCTGCCCACCCCTGCTGTTTGGTGCTACGACAAGCGTCTGTGGCCTCGAATGGACCTGAGCCGGAGGAAGTCACTGACCCCGCCCATGCTTAGTGGTGTGGTTCGCCGCCAGCCTAGAGCCCTGGACCTCAGCTGGACAGGTGTCTCCAAGAAGCAGCTCATGTGGCTTCTGAACCGACTGCAAGGCCTGCAGGAGCTGGTGCTCTCTGGCTGCTCCTGGCTCTCTGTCTCTGCCCTGGGCTCAGCCCCACTGCCGGCCCTGCGGCTCCTGGACCTCCGCTGGATCGAGGATGTTAAAGACTCCCAGCTCCGCGAGCTGCTGCTGCCTCCGCCAGACACCAAACCAGGGCAAACGGAGAGCCGAGGGCGGCTACAGGGGGTAGCAGAGCTGCGCCTGGCCGGCCTGGAGCTGACGGACGCCTCCTTGCGGCTCCTGCTGCGCCACGCGCCCCAGCTGAGCGCCCTGGACCTGAGCCACTGCGCCCACGTTGGGGATCCCAGTGTCCACCTTCTCACTGCCCCCACCTCCCCGCTCCGAGAGACCCTGGTACACCTCAATCTCGCCGGTTGTCACCGCCTCACGGACCACTGCCTCCCGCTGTTCCGCCGCTGCCCGCGCCTCCGCCGCCTCGACCTGCGCTCCTGCCGCCAGCTCTCCCCGGAAGCTTGTGCCCGGCTGGCAGCCGCCGGGCCCCCTGGCCCCTTCCGCTGCCCAGAAGAGAAGCTGCTTCTCAAGGACAGCTAGTTGGGTGCCCCCCACCCTCCCCCAGGACTCATCAGGAGCCTGGACCTCAGGCCTTCATTTCACCCCTACCAGGAGGCCAGGTCACCCACCTCATGACTTGGGATTCCTGAGTTTTACGACTTGGGGTTCCTGCCCAGGGACTCGAGCCAGCCTCCCCCACTCTCTACCCCCTGCACTGATATCTCTGGGGGTCTCTTCTTCCCATCCCCTCCCCCTTCCACCTGCTTCATTGTCCATCCCCTGGGGGAAGCGGGTCAGAGGTACTGGGGGGCGCTGAGCCAAAGGGCTGGTGGGAGGGGGGTTGAGGTGCAGTTTGACGGGGGGCGAATGGGGAGAGTATCTGCACACAGGATGCTGGGAGCAGGGGGCTGGGGGATGTGGAGGATGGGCTGGGGGTGGGGGGCGGGCAGAGAGCAGACCATCAGGGGTTCAGGGAACAAAGACCAGATACTTGGAATTGGGGGGGGGGTAGGGTGGGGGGGCCAAAAAGGGAAACCAGAGGAGCAACTGGGGATCCAGGTGTCAGAGATGAGGGGACTCGGGGAACCAGGGGAGAGCAACAGGGCTGAGTGAGGGGCGGGGGGCAAGAGCAGGTGCAAGGGGGGCGGTAGTAGCCCCTCGGGGTCACCCCTCTCCTTCCTCCCTCCCTGGATTTCAGTTCCTTCTCCCCAGCCCTGACTCCTTGAACGTCACTGACAATGGCAGCTATCTTGAGGAGTGGGGCCCGCGGGCCTGCCCGCTGTTCAGCGCGCCCTGGGGAGTGGTGAGGGGTACCCCCGCCCCCTACCTGCCTCCCCGCACTATACTTGAACATTCATCTGTACTGAAGTGTTACTTGAACCGGGGGAACCTCGGGCCTGGGGGAGCCAGAGCTTAAGGGGACGGGACCAGCTTGGACTGAGACTGGACTGGTGGACCGCCCAGTTCGGACTGGACCACCCCAGGCTCTCTCGCTTTACTGTATTGAGCAGCTCCACCCCTCCTGACCCTGAGGTGGGGGTGGGGGGTGGTGGGCCAGCCCAGTGATGGGGAAGATGGGACTCCTCCAGCTTGGCTCTTCCCACTCTTTCATCGTCATGGAACCTTGTATCCCATTTGCCCAGGGAACTGCCACTCCTGGTTGCCATGGAATTAGCAGCCAATGGACACCTCCCAAAGCCAGCGCTAAGGCTGGAAATGGCCCCTCTTAGTTGCCATGGGAACTTAGTAACGACTCTTGGCCCTCCCCTGCCCCTTCCTCTGCGGGGGCGGGGCTTTGGGAGCCAGGGGTAGGGGCAGGGGCCAGGTCCCGCCCCTCAGCCCGGGTCTCCCTGGGGAGCCAGACTGGACCATGTTGGGGAGGGGGGAATAGCCACATACCTCAGGTAACAGGGAGGTGCGAGGGTGGGGGGGAGGGACTGGGTGGACCAAAGGCCGGAGGGGAGGGGGTCCTGGGGATTCGCAGAAGGCTTGAGGATGGGGCCGCTTGGGGGAGGGGGAGGAGGCAGCCCAGCAAGGGATAAGTGGGGGACCCAGCCGGGCTGGGCCCCTGGGCCCCGGGTCTGTACAATACGGTTTGCTATAAAACTCAAAATCTTCCAGCCGGGGCCGCCGAGTTTGCGTGGGGTTGTCTGTGGCGTTGGGGATGCCGAGGGTGGGAGTTAGGGGGGATGACCGGAGTATTCTTTGAGGGTCTGGGAGGACGGGGCTCTTTGGATGGGTCTGGGGGACCTAAGGTCTAAGTGGGCCTCCAGAAATTGAGGCTGCAGGGCCTCCTGCAGTCTTTAGGGTGAGATGGGGTCACTTCTCCTGAGTTTACTGTTCAGGTGAGGGTTAGGAGTCTGGACATTCGAGGTGTGCAGGTGTACCTGGAGTGGTCCAGGATCCGGAACTCCCAGTCACTGGGGCTCGGCGTTCATCACAGTGGGGTTGAGGCACCCAGAGGACATCCTAGGTGGACTGGGGTCTCGGGGTCCCTTGGGATCTCTGTCCACGGTCCCCCGGCTCCACCCCATCATGTGGCCGCCTCAGCTCCGCCTCCGCCCCAGTTCCTGTTTCGGCCTCGGCTTCAGCCCCTAGGGCTCCCCGCAGTCGCCTGCTCTTCCTGCTCCGCCCGGGCCACGTCTTCCTGGGAGCTCGCCGCCCGCATCCCCGCTCGTCCCGCCAGGGCATGGGGCCTTCCCCAGACCTGGGCCCGCCCTGCTGGGGCCCCAGAGGCGACTCGGCTCCGCCTTGACGGACCAGCCCGCTTGGTGCCGCGGCCCCAGGATGAAGGGCGGCGAGGGGGACCCGGGCGAACAGGCCCCGCTGAACCCAGAGGCCGAGAGCCCCGCGGGCTCGGCCACGTACCGGGAGTTCGTGCATCGCGGCTACCTGGACCTCATGGGGGCCAGTCAGCATTCGCTGCGGGCGCTCAGCTGGCGCCGCCTCTACCTCAGCCGGGCCAAGCTCAAAGCCTCCAGCCGCACGTCTGCCCTGCTCTCGGGCTTCGCCATGGTGGCCATGGTTGAGGTGCAGCTGGAGAGCAAACATGAATACCCGCCGGGCCTGCTGGTGGCCTTCAGCGCCTGCACCACCGTGCTGGTGGCTGTGCACCTCTTTGCACTCATGGTTTCCACCTGTCTGCTGCCTCACATTGAAGCCGTTAGCAACATCCACAACCTCAACTCTGTCCACCAGTCTCCACACCAGAGACTCCACCGCTACGTGGAACTGGCCTGGGGCTTCTCCACTGCCTTGGGCACCTTCCTTTTTCTGGCTGAAGTTGTCCTGGTTGGCTGGGTCAAGTTTGTGCCCATCGGGGCCCCCTTAGGCACATCAGGCTCAGTGGGACCTGCCTCCCAGCTGCCGACAGTGGCCACCTCCCTTAGTCCAGCTTCCAAGCCGTCCTCTGTTTCTGTAGCCCCATCACAGGCTGAGCCCCCTGAGCCCTGCCCCCCACGGCAAGCATGTGGCAGTGGTGCGGCCCATGGACCAGGCTGGCAAGCCGCCATGGCCTCCACGGCAATCATGGTACCTGTAGGGCTAGTGTTTGTGGCCTTTGCCCTGCATTTCTACCGCTCCTTGGTGGCTCACAAGACCGACCGCCACAAGCAAGAGCTAGAGGAGTTGAGTCGCCTGCAGGGGGAGCTTCAGGCTGTGTGAGGCTGGTGTTAGCCCAAGGCTGAGAGCGCTGCCTGCCCCAGGGGTCAGTCAGAGGCCCCGGATCTACCAACCCCATTCTGAGGCCGTGCGTGGAGCCACTTCCTGTGGCCACTCTCAGGTGGAGAACAGATTCCTGCCCTCAGGGTCCTTCGGGCTAGATCTTGGGGCAGCTCCCACATTCCCAGGGATTCTCCCTGTCTAGTCTGCCTCATGGGTTTTGGAAGCTCTACTCTACACCCAGGGGGCTGGGAAGAGAATGAGAGTTAAGTGGAAGGTCCTTGGTCCAAGCTCCTGTGGCAGGTAGAGGGGAGGCAGGGAGACCCTGGTCAGACCTTCGGTGCTCTTAGCCACTTGCCCCCATACAGAATGAGAACGTCAGAAGGATACTCGCCCATCCAGCTGGCCCAGAAGGCAGGCAATCCTTATTTTACTTTTGTAGACTGTTTTATGGTTGGCTTTTTTTTTTTTTTAAGCTTTCCCCCATCCTCAGATTTTGATTTCCACGCTCTCGCTTTGGCATTTGGGTAGAGAGGGATTTAGGTGTTTCTCCCCCAGGCACAGGTCCAGCCTTTCCAAGGGAGAGCTTCCCTATTTGGAGGAGGTTCAAATGCCTGCCCCACTGCCCTAGACACACACTCATGCTTCTATAATTGATTCCTACTCTCCTGGTCCAGGGCCGGGGGGCCACGCACCCAGCCTGACTCCCTAGCAAGGATTGGGGTGATAAGGGAGAAGGTCCATTCCATAGCCCTTAGACTACAGAACTCTTCTGACACTGAATTTTTGATGCACCTAGTTTTGTATAATAAATTGTGTTTTACACATGTC EMBV3_13765 GGCCTGACTGCCGACCTGATGTGTTTTTACCCGCATTTCCTACTCGGGCTTGAGGATTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25776 TCTTCTCTGTCATGTTCGACCACATCCAGCGGCTGATCTCCTACACTGAGTATCTCTTCC Variant GeneID:512525|EFHA1:NM_001083416:40_cdna 356^463 2 EMBV3_26712 GeneID:512525 12 GENE EFHA1 MGC142737 EF-hand domain family, member A1 EMBV3_06699 TTTGACTCTCTGCTACAGGATTACAATGCCAGGCACTCACACACGTAAGGAGGAAAGGCC Gene BVT0102_241288 + 0 NULL GK000017.2:59132156-59240020 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075673 TCONS_00075681 TCONS_00075683 TCONS_00075677 TCONS_00075686 TCONS_00075682 TCONS_00075680 TCONS_00075679 TCONS_00075685 1 XLOC_046633 Coding TCONS_00075677 XLOC_046633 NonCoding Coding - 17:59136245-59222239 - TSS56998 620 1 TCONS_00075677_1 40 0.238709677419355 5 0.992848255090531 0.028481100097317 0.00754855226520277 0.0203238976522277 0.00546584103336537 0.0154066289249135 0.00653539447372162 0.00546305269451387 0.00907590224712233 0.00964028484928105 0.000227571565188317 0.00430649376914675 0.00011908259961395 0.00603957122698444 0.00469011345153433 0.00676279344198977 0.00138376907944698 7.98789816559574e-40 0.000495332269441341 0.00301856590110252 0.00748353066640561 0.00655323095675756 0.00132875471599669 0.0038733538664164 0.000498505179726321 0.0149935603395585 0.0153207969399928 0.00504148017529488 0.000854660011456639 0.000199419720526489 0.000377676634373744 XM_005217885.1 TAOK3 PREDICTED: Bos taurus TAO kinase 3 (TAOK3), transcript variant X3, 2e-134 482 100.00 0.429032258064516 NM_016281.3 TAOK3 Homo sapiens TAO kinase 3 (TAOK3), mRNA. 1e-53 214 79.45 0.403225806451613 0 noncoding 0 0 0 0 0.0507760349555611 0.66245479046843 0.00226699277470411 0.968462979114062 CAGCAGCAGCGGCTGCCGCGGGAGGGTCCGTGAGGCGCCCAGTTGCGACGGCGGCGTTGGGGTCCTGCTTGCGAGAGTGGGACCCGACACGGAGACCGCGGGCGGACGCTCTGCGCTGCTGGACCGGACATTCAGTGACTGGACCCAGGTATTCACCGGGGAACAGCGGCAGAAGAGCGACTCCGGAGCAAGTGTGAGAGAGGAAGCGGCGGCGGCGACGCGGGGCCCGGGGTGGTGACAGCAGATCTGAGTGCCCTTCTGTGGAAACATAAAGGAAAAAACCCACCTCAGCCTGGAGGAGAACCAGAAAAGTTTCTCTGATGAGTTTTAGAATGTGGGAAGTCCAGGAACAATGTGCCAGCATTAAGTTTTCTGGTGACGTCTCTCTTCCTGTTCACCTTCTGGAGTTGTACCCATACGGCCTTTCCTCCTTACGTGTGTGAGTGCCTGGCATTGTAATCCTGTAGCAGAGAGTCAAAAGTTATCAATACAGGACTCTTGCAGTACCTTCATCAATGGCAGGGATTGAACCAGGGCCGTCAGCAATGAAGATGCAGAGTCCTAACCACTGAACTGCCAGTTAATAACCTAAATTTTATTTCTGATACTATTCTTTTGAC TCONS_00075675 TCONS_00075685 TCONS_00075685 TCONS_00075685 s 5' 0 TCONS_00075675 TCONS_00075685 TCONS_00075685 TCONS_00075685 s 5' 0 EMBV3_26409 GTGAAACGAGTTGCCCGGATAAATTTCATGGCTGCATGACTCCTTGTGGGTGTCTTTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37041 GGACACAGTGGGGGAAGGAAAAAGAGGGACATGTTGAGAGAGTAACATTGAAACCTATAA Gene BVT0102_398515 + 0 NULL GK000001.2:137383027-137638234 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38563 AGACCGAATTGAAATCTTTCCCTCGCGAATACTAAAATGTTGATGGGTGAAGTGATGAGA Variant GeneID:404152|ATP6V1D:NM_001075141:47_cdna 128^245 3 EMBV3_38547 GeneID:404152 10 GENE ATP6V1D VATD ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D EMBV3_36647 CCAACGACCTAAAGCATGTGCCAAGAAACTTCGCATCTTAGCAGCAGAATACAATGACCC Gene GeneID:100139405|LOC100139405:XR_084133:85_cdna Constitutive 0 NULL GeneID:100139405 X PSEUDO LOC100139405 NULL similar to armadillo repeat containing, X-linked 4 EMBV3_42222 TTTTCAAGTGGGGTTGACCCTCCTGATGGAGACTGTCAGCAGTTGAGCTCTCTGTAGCCA Gene BVV0102_265360 + 0 NULL GK000017.2:70349567-70478278 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39082 TGCTCAGACCTGTACCTGGAAGGTGGAAAGGCTGTTTCTGATGCTTGGAAGCTATCCTTT Variant GeneID:514445|UBOX5:NM_001075669:1057_cdna 185^274 2 EMBV3_31102 GeneID:514445 13 GENE UBOX5 NULL U-box domain containing 5 EMBV3_26695 GCAGCCGTAGCTGGGATCGTCGACATAGTAGCGTAGGTATGGACACAGTAAGAGTCCTCA Variant GeneID:513711|RBM23:NM_001075636:146_cdna 561^630 1 EMBV3_00181 GeneID:513711 10 GENE RBM23 MGC139382 RNA binding motif protein 23 EMBV3_43772 GTGCAGGAAAGCTATTTAATGTTACTATGGAATTCCTGCTACATCTTTTGGCATGTTTGT Gene BVV0102_214529 + 0 NULL GK000001.2:60269178-60363756 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007933 1 XLOC_003493 NonCoding TCONS_00007933 XLOC_003493 NonCoding NonCoding - 1:60272079-60272928 - TSS5010 849 3 TCONS_00007933_3 46 0.212014134275618 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3.37960369368611e-06 0.000526359513622368 0.00088704559806652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.18026148361377e-06 XR_231886.1 LOC101908184 PREDICTED: Bos taurus uncharacterized LOC101908184 (LOC101908184), 8e-65 251 94.44 0.189634864546525 0 noncoding 0 0 0 0 AGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACTGATTCGATGGATGTGAGTCTGGGTGAACTCCGGGAGTTGGTGATGGGCAGGGATGCCTGGCGTGCTGTGATTCATGGGGTCGCAAAGAGCTGGACACGACTGAGCGACTGAACTGAATGTAGTGACCATAGTTTAAGTGTTCCACACAGAATAATCAGCTTCACATGAGAAAATTCAGTAAAAGTTAACAAAAGTGTTTAAATAGTTTAATTCCACAATTTTACTGAAGTACAATGGCCACTCCCTGTAAGTACTATGTAAAACTCAGTCCTACGTAAAACTCAGTCCTTTCCCGCAAGCTTTTAAAGTTATCATTCAGTATAAGGGCGTGAGAGCTGTTAGGAGTATAAGAATATGGCATTAGGAAAGCAATGTAAAATATTCTAATTCAATATTAGTGAGCAGGTGAGGCCTTGGATGTTACTGCCCCTATTTGAGATAGTGGTTATTTATACCAGTTCTCCTGATGTTAGAATCTGGGGTTAGAATGCTTCTATCTATAAGGAATGCCTCAATCTTTATATTTACATTATACATGCACAGACCTAAACCACCACCACACACACACACAGAGATACAAACATGCCAAAAGATGTAGCAGGAATTCCATAGTAACATTAAATAGCTTTCCTGCACAAAAGCAATAACAGAAAATGTAGTGGAAAAATTATCCCTTTTTACAGCTGTGCAAAAAGCTATAAAACATTTTCCATGTGAACAATGAAACATTGTGTGATCTATATAAATAAAACTGTAAACTCGCCAGTGAATATCAACTAAGACTTACAAATGTAAAGTTGCAAG TCONS_00003450 TCONS_00003451 . 5' 2872 TCONS_00003450 TCONS_00003451 . 5' 2872 EMBV3_01598 TGCCCCTCTTTTCAGGAAGACCCTACCAGTCACCTTGCCCTCAGGCTGTTTCTTGAGTTT Gene BVT0102_063844 + 0 NULL GK000021.2:61996013-62131038 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119938 1 XLOC_073014 Coding TCONS_00119938 XLOC_073014 Coding Coding LOC100848382 21:62099904-62106091 j TSS89690 3498 1 TCONS_00119938_2 126 0.255002858776444 3 0.435014548981571 0.0173985529525603 0.0100904166417824 0.0175270471466867 0.00830310903330183 0.0105330414330647 0.00461919322340906 0.00486299385316395 0.00666806913076974 0.0058538699116809 0.00117470369473855 6.61013584473623e-05 0.000379062679951191 0.00184384865160488 0.00276097226947284 0.00179951467500519 5.26697599964672e-09 0 1.66254611386025e-05 0.00962975932572859 0.0180896862834155 0.010655970104906 0.000431241215900981 0.000104590509259473 0.00012842896270484 0.0122444548097972 0.00748255404320551 0.0135817172258426 6.35369959412192e-05 2.94803848910138e-05 0.000142902167104343 XM_003583767.2 TCL1B PREDICTED: Bos taurus T-cell leukemia/lymphoma 1B (TCL1B), mRNA. 0.0 670 100.00 0.105774728416238 NM_004918.3 TCL1B Homo sapiens T-cell leukemia/lymphoma 1B (TCL1B), mRNA. 2e-28 132 67.92 0.103487707261292 TCONS_00119938_2 sp|O95988|TCL1B_HUMAN TCL1B_HUMAN T-cell leukemia/lymphoma protein 1B; 1e-33 117 48.39 0.96031746031746 1 coding 0 0 0 0 -2.40515143390992 0.0123166215652128 -0.789068550220427 6.68345346625593e-05 CAGACGCCCATCTACTTAAGGAGGCTGAGCCCCGGGAGTCTCCACGTGTGCCTCGAGGCGCGCCCCAGGCCCAGAGGGTCAGCCCTGCGATGGAAGCCGAAGCTTCTCCGCCGGTCGGATCGCCCCCTTGCTGCCTGTGGTTCCAGAGGCCTGGCGTCTACGAGGATGAGAAAGGGAGGATCTGGGTGGCTGTGGCTATGCAGATCATTCCCTCGTACCGAGCTCGGGGCAGCGGGGCCCCTGAGAGCACTCATGATGATAGCATCACGGTCCATCTGTGGCAGTTACCCAACCAGATGCCCAGGTCCCCCAGCTCTCTGCTTGTGTCTGGGCTGCCCATTAAGTGGGAGCTCTATCCCGGGCGAAGGTACCGAGGAACGGATTCCAGACTCTGGGAGATAGTGGACCATGACCAGGTCATCTCCATGGAAAATCTGATCCTCAAACGTCTGCCAAGTGGGAGCCACTGATGAGGCTGGTAGGTCAGGCCTGGAGACTCTCAACGTGGAGGGCTGCCCCTCTTTTCAGGAAGACCCTACCAGTCACCTTGCCCTCAGGCTGTTTCTTGAGTTTTTCTTACATAACCGCCCCTTTCCTCCCTGTCCCAACCCCATTGGACAGTGATTTCCACCAGGGACAGACCCCCCAGTTCATTCGTAAAGCACTGAATAATGGTTTTCACTCAGTTCTCGGAAGAATGAGGTGTACCTATGAACATCTCGTGTTATAGACAAGGAAACAGGTTCTGAGAGCTGGAAGGCTTTCCCTGAGACCACACAGCCTGGAAAGAGCCGCTATCAAGCTTGGATCCACTGACCTCGGAACTCTTAAGGCCGACCTTGGCACGGGGGCGCCACAAGTCTGGTCGATGGCAGTGGCCTTTGGGGACCCTGCAGTGACCCACACAGTCTTATCCCTGAGACGGGCAGCAGCCTGGCTGAGGGCCTCGAGTTGGGCCTGCTCTCCTACCCCCGGTCCTGCTCCAACGGGGCGGCCGCCCAGTTCCTCCGAGCGTCCCTGACTGTCAGCTTTTGTCTTCCCCCAGACCCGGCTGGCCCTGTGCCTTAAGCGAGAATCCCTATGCACCTGCTCATTGGTTTGCACACCTAGGGGCCCCGTCTTCTTTGCGTTTCCCATCCCCTCCTCCTGCTTTGGCTTGTCTGTACCCTTTTGTGTTCTTTGTACCATCCTCAAGGTGCCGCGCTCCCAAGCCCCTCCCCTCCACGCCCACCAGGCCCCTCCCCTCCACGCCCACCAGGCCCCTCCCCTCCACGCCCACCAGGCCCCGCCCCGCGGCCTCCTGCGCAACCTTGATTGGAAACTTGCCTTCCATCCACTCCGCCTCTGGTGGGGGCGGCTCCGTCAGGGCCCGGGTGGCAGGTCTGGACGTGGGGCTCAGAGGCCGCATGGCTGCCATTTCTGCTGCCGCTTTGGCTGGAGTAGAACATGGACTGGGCAGGCTGTCCACTCCTGAGCCTTGATCAACCCTGGGAAGTGAGTGCTGGCCCCTAAGGGTCCCCCTCCAGTGCCGGTTAATTAAACTTCATTGCTTGTTGTTAACTTCTGTGCGGAATCGCTTACCTTAAATTGATAACTAGTGTAGGAATGCAGCAGCTGAAGGTAGAACTGCAATTATTCCTTGAGTGTTTTTGCACACCTGAAAGGAAGCTGAAATCGGCTCGTTTCAGCAGCAGGTCCGCGGTGGAGGATAAGGGGATGGAGGGTCAGTTCTTTGCCAGGCTGGACTCCGAAAAGGCATGCAGACTGTGGCAGTCACTGCCGGAGAACCAGCGGCAGGTGGGCACTTGCACCGGCAGTGCGGCTCCCGTGTGCCCTGGATGACAGAGGCAACAGTCCATGAGCAGGGAGGGTGAGGCAGAGTCTGGGCGCGGACTGGGTCTTGCCCTTGAAACCAGAGGGAAGAAGAGGACAGTGTGGATGGAGGGCAGGGTGACAGTTTCACGGCGACAGCAATAAGAGGGAGTTCGCTTCTTGGGGCTTCCCTTGTGGTCCAGCTGGTAAGGCTTGTGCGCCCTAAGTAGGGGCCCGGGTTCGATCCTTGGTCAGGGAACTAGATCCCACCTGCCGCAACAAAGCTCCTGTGAGCTGCAGCTAAGACCCAGTGCAGCCAAAATAAATATATATTTAAAAAAGAGGGAATTCATTGTGTCATATCAGTCATGAGAAGAGGTCACCAACATGAAAGTCCTAACCTTAAAAATGAATCCATGATGTCACTGAAGAAAGCCCAGGGGATGATGTTCACGATCTTAGGATAGGAAACACTTTAAAAAGACAGAGAAAGCCAAAGACAGTTAAAACAGACAATTAGCTTTCTCAAAGGCAGCATTTTCTATGAGAAGATGCTACAAAACAAGAGTGGAAATACGAGGACTAGATACAAAGCACTGGAGTGCAGGATATACAGGAAACTTGCAGAAGAAATCCCCAAGGAAAGAAGAAAGGGCGAATGCCAGGAAGGAGGCAATTTACAGAAAAGGAGACGATGTTGGGAAGTGCAGGTTTCAGAATTCAGAAATGTGTATCCTCGATTTTCGCTGAAGTTCAAACTTAGGCGTTGTGGGAGTCGATTGTTATAGACACCTTGGAGGTTTGGTGGGCAATTCAAGAGCATTTATCAAATTTTGAGATGACACAAAGAGCCATACCTAGAGTATTAATACCAAGAGCAGATTTCCAAGCTCAGCGCAGTGAGCCTTTGGGCCAGATAACATCTCCGTCATGAAAGGCTGTCCTGTGCTGTCTGGCAGCATCCCTGGTCTCTGTCCATGTAGTGCCAGGGACATCCCTTTGTCCACCCCACTCCCCAAGTTGTGATTACCGAATGTCCCTTGTTGGGGGGAAAAGTTTCCCCCAGTTGAGAGTTGCTGTCCTGGAAGAACATTTGCACAAGAGGGATGGGGAGGGAGCACCGTGGTCAAGGCTCAAGTCCACCACGGAAGAGTGGTTAAAGAAAGGGAGACCCCAAGAGCAGAGGCTGGGTCTAGCCCCTTCCACTTAGAAGCTTGTGTGATCCAGCAGCCTGGCTCTTTAGAAGAACCCTCTTGGGTCAGATGGTAGCTTTAGTTCTAATTTTTAAAGGAATCTCCTTACTGTTCTCCACAGTGGCTGTATTCAGTTTACATTCCCACCAACAGCAGTCCCACTACTGGGCATATACCCTGAGAAGACCATAATTGAAAAAGACACATGTACCCCCGTGTTCATAGCAGCACTATGTACAATAGCCAGGATGTGGAAGCAAAGACCTAGATGGCCATTGACAGATGAATGGATAAAGAAGCTGTAGTACATACATACAATGGAGTATCACTCAGCCATAAAACACGAATTTGAGTCAGTTGTAGTAAGATGGATGAACCTGGAGCCTGTTGTACAGATTGAAGTAAGTCAGAAAGAGAAAAACAGTGTATATTAACACATATATGAAATCTAGAAAAATGGTACTGATGAACTTTCTTGGAGGGAAGGAATGGA EMBV3_33543 CAGGCCCGCGGGGAGCGCAGCCCGGCCGAGAGACTGATGGAGAGGCAGAGACGGAAGGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29990 GTGTCAGTAACACTACCTGTAAAATTTCAGTCCAAAAGATAAAGCTCTCAGGGAGAAATG Gene GeneID:513742|DAAM1:NM_001081588:106_cdna Constitutive 2 NULL GeneID:513742 10 GENE DAAM1 MGC139910 dishevelled associated activator of morphogenesis 1 EMBV3_09180 CATTTGCAACCCAGATGTAAAACTCTAATGATTTGGCCATGAGGCGCTGCTATTATAAGC Gene GeneID:508025|ZNF423:NM_001101893:141_cdna Constitutive 0 NULL GeneID:508025 18 GENE ZNF423 MGC139083 zinc finger protein 423 EMBV3_42955 GCTGGAGCAGCAGGACCCAAAGTCTCCTTCCCACAAATCAAAAAGGCAGCAGCAAGAATT Gene GeneID:788312|LOC788312:XM_002685354:233_cdna UTR3_Alt 2 NULL GeneID:788312 2 GENE LOC788312 NULL similar to Formin-like protein 2 (Formin homology 2 domain-containing protein 2) EMBV3_02260 TCAGAAGCTGTGGCAACTTGAATGTGTCTGTTGGACCCTACTAAATCAGCGACAGAGTAC Gene GeneID:515302|WDR76:XM_002696812:579_cdna UTR3_Alt 3 NULL GeneID:515302 21 GENE WDR76 NULL WD repeat domain 76 EMBV3_24737 GGAAGACTGTCCCTTCCTTCAGAGTCGGGGCTGGACCAAGAACTGTGTCAACGCCATCAA Gene GeneID:519041|CRYGN:XM_002687050:159_cdna Constitutive 0 NULL GeneID:519041 4 GENE CRYGN NULL crystallin, gamma N EMBV3_34880 GACAAGAATTTCAGGCGTGGGTCAACCTGGAGAAGGCAGTTTCCTCCCCGTGAAGTACAT Gene GeneID:100336998|LOC100336998:XM_002687178:15_cdna Constitutive 0 NULL GeneID:100336998 5 GENE LOC100336998 NULL PTPRF interacting protein alpha 1-like EMBV3_08779 TGCTGGGGATCATGACAGGTGTTTTTGCTGGTCTGCTTGCTGTACGCTTCAGGCTGTCAA Gene GeneID:616893|LOC616893:XM_002689833:32_cdna Constitutive 0 NULL GeneID:616893 8 GENE LOC616893 NULL similar to ribosomal protein S15a EMBV3_23176 AACAGTTTTTGGAGTGTGCCCAGAGCCAGGGTGACCTTAAACTTTGCGAGGGTTTCAGCG Gene GeneID:614033|CHCHD9:NM_001034746:383_cdna Constitutive 0 NULL GeneID:614033 25 GENE CHCHD9 MGC126935 coiled-coil-helix-coiled-coil-helix domain containing 9 EMBV3_38001 CATGGGCATCATTGTTGGTCTGGTTCTCCTTGTCACTGGAGCTGTGGTGGCTGGATTTGT Gene GeneID:100125916|LOC100125916:NM_001105487:2_cdna Constitutive 0 NULL GeneID:100125916 23 GENE LOC100125916 MGC179252 hypothetical protein 100125016 EMBV3_21179 AGGATTTCACTGGTGGTCAAGTAATTAGGACTCCATGCTTCTACTGCAAGGGGCACTGGC Gene GeneID:615388|CD300LG:XM_002696037:313_cdna Constitutive 2 NULL GeneID:615388 19 GENE CD300LG NULL CD300 molecule-like family member g EMBV3_24321 CCCTTCCTTGGGCACATACTTGAAACTCTGAAAAGACACTGGCCTCCCTTGCCACTCAGA Gene GeneID:538745|GJC2:NM_001046440:23_cdna Constitutive 0 NULL GeneID:538745 7 GENE GJC2 GJA12 MGC137724 gap junction protein, gamma 2, 47kDa EMBV3_42830 CCATGTCTACCTGAAAGAGAAGGAATACAGCGACTGCGCCTGGGAAATCGTCATAATGGA Gene GeneID:781815|LOC781815:XM_002707834:142_cdna Constitutive 0 NULL GeneID:781815 8 GENE LOC781815 NULL similar to interferon-tau EMBV3_32188 TGAGCAGCCCACGGCCCTTCCTCTGTGCAAGAACATTACCTACTGCAAGCCGAATGAAAT Gene GeneID:618706|SLURP1:XM_002692594:346_cdna Constitutive 0 NULL GeneID:618706 14 GENE SLURP1 NULL secreted LY6/PLAUR domain containing 1 EMBV3_12195 TTTTAGTTTTCTTGAAGGAGAAGATGAGCACATGTCCTTCTACTCTGCCATCTTGTAGAG Gene BVT0102_438219 - 1 EMBV3_11233 GK000003.2:93625435-93674235 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02100 GAAACCAGCTCTTCTATCTGAAACAAAAAGGCAAAGGCACATAAAGCTTTGAGTAAGGTG Gene BVT0102_045581 + 0 NULL GK000030.2:11797281-11951793 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246267 1 XLOC_150946 NonCoding TCONS_00246267 XLOC_150946 NonCoding NonCoding - X:11799796-11805179 - TSS184676 4174 4 TCONS_00246267_2 85 0.673215141351222 3 0.225009290226681 6.51925346215897e-06 4.81478169738637e-06 2.10619632008844e-05 5.67006273595766e-05 1.89255181356531e-05 8.04135917900667e-05 5.58860873096382e-06 1.57448310502523e-07 0 5.17515070750641e-06 1.53563032869524e-05 9.08054443688966e-05 2.74967148365308e-06 0 5.87709274040327e-07 0.00323869952773308 0.00343299474120454 0.00110626814824723 1.37439907143968e-05 1.89520288292001e-05 1.96369398451854e-05 0.000780929409090274 0.0012415973758123 0.000938844305784802 1.49392215165025e-05 1.29841631935694e-07 2.59689309069869e-05 0.000148427012964012 3.95440054226258e-05 0.000242948351541265 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 856 89.89 0.152371825586967 0 noncoding 0 0 0 0 -0.0759608712469959 0.589007909436733 -0.0717254849006498 0.287896530174776 GTCCAAATCATGTTGGAGAGGCCTCAGTCTGTAACCATTAAAACAGCTATAACTCAACAAAGATGCCTCTACCCAGGACTCTGGACAGTTCTACACATCTGTACATCTACAGAATCAAGAAAGAAGAAAAAGGAGGAGAGGAAGAGAAGGAAGAAAGGTGTTCATTACTTCAAATGCATCAGCAGAGGAACAACATCAAGTAAGATGAAGAACCACACTAACATTGTATCACAAGAAGAAAATGACATTTCCCAAGAAGCGGTGTAAATGGAATTTTGCCATGTAACTGGTAACAGAATTCAAAGTAACTGTCATGAAGAAACTAAGTGATATACAAGAAAACATAGAACGAAAACCTAGAAAGGCAGTTCAGTCAGATCATGAATAAAATTAACAGAAGGAGAAACTGAAACTCTTAAACAGTATGCGTGCTCAGTTGTCCGTTTAGGCCAGGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGTTGAGCGCTGAAGAATTGATGCTTTTGAAGTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTTCAAGGGGATCCAACCAGTGCATCCTAAAAGACATCAGTCACTGGAAGGACTGATGGTGAAGCTTAAACTCCAATACTTTGGCCACCTTATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGTTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGAAAAAGTACGAGATGGCTGGATGGCATCACCGACTCGATGGACATGAGTTTGGGTGAATTCCGAGAGTTGGTGATGGACAGGGAGGCCTGGTATGCTGGGATTCATGGGGTCGCAAAGAGTCAGACACAACTGAGTGACTGAACTGAACTGAACTATGCTCAGTTGTGTCCAACTCTGCGACCCCATAGACTGCATCCCACAAGTCTTCTCTGTCCATGGGATTTCCCAGGCAAGGATACTGGAGTGAGTTTCTATTCCCTATTCTAGGGGATCTTCCTGACCTAGGGATCGTACCTGCATCTCCTGTGTCTCCTGCATTGGCAGGTGGATTCTTTACCACTGAGGTACCTGTGAATCCCTAAAAAAAAAAAAAAAAAAAAGTACCAAATTATTAAGTTGAAGAACCCACCAAAATGAGATGAATAATGCATAGAAAGCATTGTACATAGAAAAGACCATGTGGAAGACAGAATCAGTGAGTTCAAAGGTAGAACTCTAGCAGTGACCCACGTAAAACAAAAGAAAGAAAATCTAAAAAAATGAAGAAATAATGAGAACTACCCAACTCTTAAAAAGGGAAAAATTAAGATAATGGGTATCCCAGAAGAAGAAAGGTAGAAAGTAGTGTAACAGCATTCATTAAAAAAAAAATAGGTGAGAACTTCCCAAATATGGGGAAGGAACAAGATACAGAATTTCACGAAACCAAGACAATACCTAATTACCTCAATGCAAAAAGACCTTCCTCAAGATACATTAAAACTATCAAAACTCAATGACAAAGGCAGAATTTCAAAGTCAGCCAGGGGGGAAAAATGGTAACCTACAAAGAAACTCCTATTAGGCTATCAGCAGATTTCTCTGTAGTCAAGGAGAGAGTGGAATGACGTACTCAAAATACTAAAAGATAAAAATTGTCAACCAACAATACACTATTTAGCAAGATGCCATTCAGCTATGAAGAAGAAATAAAAGCCTTTCCCAGAAAAACAAAAGCTGAGGGAGTTTGTCAACCCCTAGACCTGCTTTACAAGACATGTTGAAACCAGCTCTTCTATCTGAAACAAAAAGGCAAAGGCACATAAAGCTTTGAGTAAGGTGATAGAATTGAGCATTTTCAACTCCATATTAGAATGGGCTGTTAAGCAGTTAATTATAGCATGAAGGTTAAACAGAAAAGATAGTAAAAAATAATTACACCTACTGCAATTTGATAAAATCAAAAAGGGATACATAATGTGAGATAAAAGCATAAAAGGGAGAAGAGAAAAAGGATGAAAATCAGACAAAGATAAGATGCTATCAGCAGAAAAGGACTATTTTGTCTACGAGACATCTTAAAAATACCTCATGGCAACCACAAAACATAACATCTATAGCACAGACACAAAAAAAGAGGAAACTGAGAAAAACATAGAAAACTACTAACATAAAATGGTAGAACACAAAAATAAACAAGTTATAGAGCAATAAGAAAACAAGAAGACTGCTACCTCATGCCATACACAAAATAAAGTGGACTAAAGACTTGAATATGGCGTATGAAACCATAAACTCCTAGCAGAAAGCATAAAGAGTACATTCTTTAACATCAGTTTAGCAGTACCTTTCTGGATGTCTCCTCATACAAGGGAAGCAAAACCAAACATAAATAAGTGGAACCTACAGCAAATTAAATGGTTTCTGCACAGCTCAGGAAACCAAAACATAATCAAAAGACAACCTACTAAAAGAAAATACTTGCAAATCATAAATTTGATAAGATTTAATGGCCAAAATCACTTCATGGGGAATAGATGGGGAAACCGTGGAAACTGTGTCAGACTTTATTTTTTTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATGAAAATACGCTTACTTCTTGGAAGGTTATGACCAACCTAGAAAACATATTAAAAAAGCAGAGACGTTACTTTGCCAACAAAAGTCCATCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGGGTTGGACTATGAAGAAAGCTGAGCGCCAAAAAATTGATTGCTTTTGAACTGTTTTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCATTCCATTCTAAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTGGGCCACCTCATGCAAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGAGGCAGGAGGAGAAGGGGACGACAGAGGATGAAATGGCTGGATGGCATCACCGGCGTGATGGACATGAATTTGAGTGAACTCTGGGAGTTGATGATGGACAGGGAGGCCTGGCGTGTTGCAATTCATGGGGTCGCAAAGAGTCGGACATGACTGAGCGACTGAACTGAACTGAACTGAATGGTCAAAATATATAAAGAACACATGTAAGTGAATAACAACAACAACAAAATCCCAATTTTTAAAAAAATGGACAAAGGACCTGAACAAACATTTTTCCAAAGACGACATATGATAGTACATTGGGCAAATGAAAGGATGTTCAACATCCTTAATTATTAGAGAAATGCAAATGAAAACCACAATGAGCTATTGCTTCACAACTGTTGGAATTCTATTATCAAAGAGGTAGGAAACAACAAATGTTGAAGAGGATGTGGAGAAGAGAACTCTGTCATTTTGTGTTTACTGCAAGGCAAATGGCTCTGCCAGTTGGGACTACAATTTATCAAGCTGGCAGAGTGACAAATTTCATTGTTGTAGAAAATTTTATCATATATTCAGTTCTGAACAGTACATATGAAAGAGAGGTGTGAGCAGGCAGAACTTACCAATAAGGTCTTCATAACTTGAACTTACCAATACTGTAATGACACTGGCCCAGGAGACAGAGATCATTTGGTTTCCTCGAACCTGGAGCATATCTCCCTGAAAGATTTATCTGCCTCACCTGCCACCAAGGGTCCCTGAGTTTCAGGATCAGATATAATACCACAAAACAGGATCTCCCTATGAAAAAAAAAAAATTGTCACTCACACCTCTCTTCCATATGAACTGTTCAGAACTGAATATATGATGAAATTTTCTACAACAATGAAATTTGTCACTCTGCAAATAAAGTAGGATGTTGAAGGATTAATTCTTAAAATTATACATTAATAGCTTTAACTTCCAGCTAATTCTGCCCCATAAGAAGGATGTTAAGACAGTCACCAGTTTATGGTAAAATAGTGATATATCCACAAGTGACTTCTGAACTAAAGTTGTTTAATATGCATGTTTGTTGATGCAGTATTGTCACCCAGAAAATCACTCTGCCAGTAATAGCTTCCAGTAGATGTAGCCTTGGTCCTCTGAGACACTGGTCGCCAGCTTCAGTATACCAATATTGGGAAAAGTAGTCATATATTAG TCONS_00243745 r 5' 147936 TCONS_00243745 r 5' 146615 EMBV3_08484 ACATGTGCAGGTGTGTGGTCCCAGGACAAATGGAAGGGCCGTTTTGATGTCAGGTGGATT Gene GeneID:541050|YTHDF2:NM_001076253:260_cdna Constitutive 0 NULL GeneID:541050 2 GENE YTHDF2 MGC139963 YTH domain family, member 2 EMBV3_26618 CCCCGGCCCGCACCGAAAAGGTGATTGCCAACCCTGACCCTCGCAGTGACCCAGAGCCCC Variant GeneID:537201|JAK1:XM_002686327:108_cdna 80^159 1 EMBV3_15345 GeneID:537201 3 GENE JAK1 NULL Janus kinase 1 EMBV3_23259 AGGATGCAGGCTGGCCTTGGTTGTGCCACTTTGTCTTTCTGATGTGGTCATGCCTCTGAT Gene BVT0102_426862 + 0 NULL GK000025.2:3830939-3839219 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146055 TCONS_00146054 1 XLOC_089006 NonCoding TCONS_00146054 XLOC_089006 NonCoding NonCoding - 25:3832138-3833450 - TSS109305 863 2 TCONS_00146054_1 60 2 0.34324942791762 1.57651465712114e-05 0 0 0 0 0.000102803221817053 0 6.85356732228427e-06 9.25842477102859e-09 1.58914362354576e-06 8.36094199355252e-05 0 0 0 6.82207993360865e-05 0.000296398611023964 0.00250092313989327 5.81476804531127e-05 0 0 0 8.59866601720316e-05 1.48564341558906e-09 0.000388520373465484 0 0.000236752802191763 5.79155782165213e-09 0.000531727672613004 3.5295284576555e-05 0.000104358770837206 0 noncoding 0 0 0 0 -0.445173129472613 0.0487391806706065 0.0223832417912429 0.73502055256171 GGAATTCTCAGATCCATGGCTGTTCTGTTGGATCCACGGCTGTTCTATTGGATGGGCGGCTGATGCGGGAATGCTTCCCTGAGGACCCTTCCTTCTAACCTCCCCTGCTTGCCGGGCAGTCTGGGGGTTTCCCCAGGAGAGGTGCCAGGGCTGCTGTTGTCCGGCCCAGGTGGCCATGTCCCAGGATGCAGGCTGGCCTTGGTTGTGCCACTTTGTCTTTCTGATGTGGTCATGCCTCTGATCGGTTCCCATCTGTGGCCTCACGCATGGCTGAGTGGCTCAATAAGAGGCCTTATTTGCTGTTGTCATGAGTGAAGTGGTGGGGCAGCTCTGAAACCGCTGGGTTTCAGGATGTCCCATCCAATCACTAGACATACTGTTATTTTTCCACACACCCCACACACCCCGGGGGTGTGAGCTGCTCTCCTCTGTTCCCTTAATAAACAGCGTCTGTCAGTTGTCCTGGCACCTGGGCTCTGTCCTGCATGTTCACTGGGGCCACCCAGTTGAGGGATGGCTTCTCCCTTCTGGGCCAGCTTGTGGGGCACGTAGCGTCCACTCAGATCCAGCCACGTCAGTGTCGCCAACGGCCCACCCACCTGCCCCTCACAGACTCACTTCTCACATCCCGTCTGCTGCTGGAGGTAGCTGCCCTCTGCCAGGCCTGAGAGCTGGGCCAGTCCAGTGCCTGTTCCCTGACGTTCTCTGTCCTGTAACAGGACTTCACGTTCTAGATGGAGACTCAGACCTGGGAGCTTGAAGCACCTTGTCCAAGGGGCAGGGCCCACTCTCGGCCCTCACCCTCCTGGCCTGCTGCTTCAGCAGTTAGCAGAGTTGAACCTGGGACAAAGATTTTGTTTTCT TCONS_00144374 TCONS_00144375 r 3' 1201 TCONS_00144374 TCONS_00144375 r 3' 2052 EMBV3_35386 CCATGGGTCTCTATGGTGGGAATTCTCTTGTTGGGTGATCAGCTTGATAATGTTGCTTGA Gene GeneID:782370|LOC782370:XM_002707825:141_cdna Constitutive 0 NULL GeneID:782370 6 GENE LOC782370 NULL similar to UDP glucuronosyltransferase 2 family, polypeptide A3 EMBV3_38501 TCTATAAGCCTGTCGTGTGGTTTTGGATCCTTGTAGGGCTTGCTTACTTCGCTGCTGTCC Gene GeneID:282590|KCNK2:NM_174686:25_cdna Constitutive 0 NULL GeneID:282590 16 GENE KCNK2 MGC142615 potassium channel, subfamily K, member 2 EMBV3_28672 AACCAGTGCATGCACACCCAGCTTTCTTCATCCTTGGACACCTGTCCCCAGGGAACAATA Gene GeneID:510906|DDIT4L:NM_001081519:5_cdna Constitutive 1 NULL GeneID:510906 6 GENE DDIT4L MGC155271 DNA-damage-inducible transcript 4-like EMBV3_15675 GAGTAGAGAGATCACTCAGAGGCTACTCCTGCAATTCACGTGGGCTGCCCTCATAAGAAT Gene BVT0102_136132 + 1 EMBV3_33697 GK000011.2:67158252-67187148 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032468 1 XLOC_018708 NonCoding TCONS_00032468 XLOC_018708 NonCoding NonCoding - 11:67161094-67161902 - TSS23467 808 3 TCONS_00032468_3 52 0.139851485148515 1 0 0 0 0.000297777754656639 1.02774098695884e-05 0 0 0 0 0 0 0 0 0 0 0.000965450595151246 0 0 0 0 0 0 0 0 0 0 0 2.90057239872016e-05 0 0 0 0 noncoding 0 0 0 0 -0.183686758655885 0.183456811026351 0.0304767489303032 0.529854879698193 GCTCAGATGCCCATCCTCTCGGGAAACATGGAGCAGAGGGCTCCCAAGCAGCCTGAGGCTCTGGAGAAGGGGAGGGCCAGGAGCTGCACGGCACAGGAGTGGATGGCTGGGCTCTGGGTTCAGGACAGGAGGATGCATATGCGCTGACATCATGTAAACTTCCACATTCCACTACTTCCTCTGCAGATAGCATCAGGTCACGTGCTGCCAGATAGCATCAGACGTGTGCTGCCGGGGAGCAGAGAGATCACTCAGAGGCTACTCCTGCAATTCACGTGGGCTGCCCTCATAAGAATTGCAGGAAAGCTTTCATCCTGCCGGGAAGGCTGGATAAAAGGAGGCCCCGGGGATGGAGATTCAGCTGTTGCTCAAGGCTGGCCTTTGGTCAGCCACAGAGAGAGCTGCTGACTGACTTCAGATGAGAAGTGAGTGCAGAATACCAACAGGGAGGCCAACCTCTCTTTCCTCTGCTGCCTGGAAACTGTTTTACGATCCTAGAATAACAGACTGGAAGATACCCTTGAACTTGTCTAATCTAACCTATTCACTTAATGGATAGTGAAACTGAAGCCCAGAGACAAGTAAATTGTCAGAGTTCACAGAGCAATGAGGAAAAGGTTTAAAGGGCTCCTCTGTTCCACCGTTCAGTGATGTTTGTGATTCTTAGCTTCTGTCCGAGGGTTCTGCCCCCAGACCAGGACCATGCTGTGAAACCCACTGAACGTCTGTCACTTCAGTGCTTCCGAAATATGGAGCTGGGCTTAGCTCTTGGTCACAACCAAGACCCACCTAATATGGCATTTTCCAC TCONS_00025229 TCONS_00025230 TCONS_00025231 TCONS_00025232 . 3' 631 TCONS_00025229 TCONS_00025230 TCONS_00025231 TCONS_00025232 . 3' 1438 EMBV3_25293 AAGTGTCACATGCAGGGAGTGTGAACATCAGAGGTGGGTTATTATCCGGTCTGCCTTACC Gene GeneID:505888|BTBD10:NM_001075230:83_cdna Constitutive 0 NULL GeneID:505888 15 GENE BTBD10 MGC139850 BTB (POZ) domain containing 10 EMBV3_22349 GCACCCTGAGACACAACAGACCTTCATCAGCTGGTATGCCCTGTTGTTCGGTGTCTAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38416 GGCAGAGACCAAGCAAGGGAAAACTGGGGATGGCAGATCTTTGCTCTAACACATTAGCAG Gene BVV0102_136583 - 1 EMBV3_30983 GK000001.2:83580994-83583027 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001378 TCONS_00001379 TCONS_00001380 1 XLOC_000347 NonCoding TCONS_00001378 XLOC_000347 NonCoding NonCoding - 1:83581024-83582692 - TSS702 813 1 TCONS_00001378_1 78 0.360393603936039 2 0.513497300539892 2.2056712320516e-37 9.8877582167678e-05 0.000160039046133155 5.10710533970057e-05 7.50511085817054e-05 1.35352283271901e-146 1.39054188342953e-22 1.30684253720792e-193 2.91148366929536e-05 0.00017763732909312 0.000136589370537256 4.77769192835674e-135 2.44441256333634e-05 0.00015622111005241 0.000133792522761544 0.00108209504723198 6.12631638398961e-05 0.000335247604737025 0 4.03530138473629e-05 6.09120964812763e-05 0.000460786593288602 0 0.000626515599413814 7.00630199641891e-05 1.15336128016732e-30 1.91777741345315e-266 3.00792676813617e-93 0.000499981317976756 0.00059161156896036 XR_233337.1 LOC101907353 PREDICTED: Bos taurus uncharacterized LOC101907353 (LOC101907353), 0.0 1337 100.00 0.910209102091021 0 noncoding 0 0 0 0 -0.0936909386510987 0.566916146072855 0.0264991130543306 0.630942397910624 CGGTCAAGGCCCGCCTCCTACCGGTGCCCCGAAAGCTCGCCCTTCCTTCCAAAGCGCATGCGAAACGGTGACGGAAAGTGGAATTCTAACGGCAACTACAGAACTATCTGGTTTCTTCAACAACACTGCAAAAGCTGAGGGAGAACCTGTGGCTTTTAAGATTTAAGAAGCATCCACCAATCAAGGAACCTTGTTTGGATCCAGATGTAAGTTGTGACAGTTTTTTTGTAGGACACTTAAGCATGAACACAGATTGGATGTGACATTAAAGAGCTAATCACAAGTTGAACCACTATGATGGGAGTTCATTATATATTTTCTACTTGTTTGAAATTTTCTTACTAGATTTCTTAGGTTTAAAAAGGCAGAGACCAAGCAAGGGAAAACTGGGGATGGCAGATCTTTGCTCTAACACATTAGCAGAATATGGAGCATTCCCCTCAGGGTCCTGTTCACACAATTCTTTGGCAAGGGGAAGGCATGGAGGGAGGAATTATCTAAGAGGCCTGTCTGCCTGTTCAGTGACCCCATGGATTGTATGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTTTCCAAGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCATCAGGGAATCTTGCTGACACAGGATCGAAGCCTGGTCTCCTGCATTGCAGGTGAATTCTTAACCCCTCAGCCATGGGGGGCGGGGGCAGCCCGTAAGAGGCCCGGGAAGAGTGAAATTTTTCCTTTTTACAACATACCCACCAAGGTCTGGGAAGCTTGAGTAACTGGGAAGAGGATAAAATTAAGAAGTCAGTCAGTTTC TCONS_00004350 TCONS_00004353 r 5' 0 TCONS_00004350 TCONS_00004353 r 5' 0 EMBV3_32098 TGATGAAGAATCGGTGAAGATTGTCCGCCTGGTGAAAAACAAAGAACCCTTGGGGGCCAC Gene GeneID:508710|MPP3:NM_001103235:218_cdna UTR3_Alt 3 NULL GeneID:508710 19 GENE MPP3 MGC157331 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) EMBV3_37089 TCGTCCTCTATAAGAAAGTCATCATCGCGTTCGGCTTCATGGTCCCCGACGTGAAGTACA Gene GeneID:541019|CSRP2BP:XM_002692153:169_cdna Constitutive 0 NULL GeneID:541019 13 GENE CSRP2BP NULL CSRP2 binding protein EMBV3_41431 ACGTGAAGGCCCCGATGTATCTGGACGTGACCTGAGTTGCACCGAGGGCCTGTTCAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09242 GGCTGTATTCATGGGCAAGAGCGCCCCCAACTCACACACAAGACCTCAAATCACACCATA Gene BVV0102_131297 + 0 NULL GK000005.2:100193140-100205181 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33633 TCCGGATGGAGTCTGGAAATGGGTGGATGGGTCGGACTATGAGACCAACATCAAGAATTG Gene GeneID:514833|LOC514833:XM_002695798:363_cdna Constitutive 0 NULL GeneID:514833 19 GENE LOC514833 NULL similar to C-type lectin, superfamily member 14 EMBV3_22308 TGTACACGAACACCCCCGATGGGCACTTCGTTCTTGATAGACACCCAAAGTACGACAACA Gene GeneID:509102|PIPOX:NM_001014878:82_cdna UTR3_Alt 2 NULL GeneID:509102 19 GENE PIPOX MGC137271 pipecolic acid oxidase EMBV3_30893 TGCGTTGCACCAGTCGGTCATCGACGGCAACCTGGAGCTAGTGAAACTGCTGGTCAAGTT Gene GeneID:100299743|LOC100299743:XM_002691694:29_cdna Constitutive 0 NULL GeneID:100299743 11 GENE LOC100299743 NULL similar to Maternal Effect Lethal family member (mel-11) EMBV3_10827 CCGGGGCTCCTAGCGGGGCAGTGACCATGGACTGGAAGCTTTTCTATTGGATGAATTTTA Gene GeneID:527026|B4GALNT3:XM_002687914:81_cdna Constitutive 0 NULL GeneID:527026 5 GENE B4GALNT3 NULL beta-1,4-N-acetyl-galactosaminyl transferase 3 EMBV3_11095 CCCCCAATCCCAGCCTACGGCGGTGTTGTTTACCAGGATGGATTTTATGGTGCAGACATT Gene GeneID:521304|FOX1:NM_001075818:201_cdna Constitutive 0 NULL GeneID:521304 25 GENE FOX1 A2BP1 MGC140727 ataxin 2-binding protein 1 EMBV3_42744 GAGGGAATGCATGGTGAAGTTGACTGTTGTTCCAACCTCTCTGATAAGGAAAGCACACCC Gene GeneID:100337079|LOC100337079:XM_002687116:454_cdna Constitutive 0 NULL GeneID:100337079 4 GENE LOC100337079 NULL prolactin-inducible protein homolog-like EMBV3_16755 TGTTTAATTTTGGCAAAGAGAAGTTTGAAGGTTTTAGATGACACTGAAAGGGGTTCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28508 GGACTGCGGCGAGCCGAAACTGAGCAAAAGTGAGCTAAAGAGACGCCTGAAAGCTGAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16739 AAAGCCTTCATTCTTGGGTTTCAGGTGGAGTTAAACCTTTAAAGGGAGACCACCTGTCCA Variant GeneID:360193|PNO1:NM_183085:23_cdna 481^541 2 EMBV3_20266 GeneID:360193 11 GENE PNO1 NULL partner of NOB1 homolog (S. cerevisiae) EMBV3_35207 TGATGGACTTCATCCACGTGCCCATCCTGCCGCTCAACTCAGCCTTCCTGGCCGCCCGCA Gene GeneID:100336671|LOC100336671:XM_002692942:73_cdna Constitutive 0 NULL GeneID:100336671 15 GENE LOC100336671 NULL progesterone receptor-like EMBV3_16060 GCAGACGTGGCCTCTCCTCGAGCCCCAGACTGTCCGAATCGCTTTTATTTTCTTATCCTT Gene GeneID:767927|FAM19A5:NM_001077000:68_cdna Constitutive 0 NULL GeneID:767927 5 GENE FAM19A5 MGC128469 similar to TAFA5 EMBV3_21715 TCTTTCTCCTCATACTTTCTGCCACCAGTGGGGTCTCAGGTGCCTGGGGTGTCCTGTGCC Gene GeneID:509803|C18H19ORF54:NM_001164025:580_cdna Constitutive 0 NULL GeneID:509803 18 GENE C18H19ORF54 NULL chromosome 19 open reading frame 54 ortholog EMBV3_01417 GATTTTACTGAAGAAGAGGAAGCCCAGGTACGCAAAGAGAACCAGTGGTGTGAGGAGAAG Gene GeneID:782054|LOC782054:XR_084060:349_cdna Constitutive 0 NULL GeneID:782054 24 PSEUDO LOC782054 NULL similar to S-phase kinase-associated protein 1 EMBV3_22200 CATCTACAAGCGGAACATCGAGCTGAAGGTTGAAGTAGAGAGCCTGAAACGAGAACTCCG Gene BVT0102_043835 + 0 NULL GK000003.2:22995442-23186297 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172576 TCONS_00172589 TCONS_00172595 TCONS_00172592 TCONS_00172593 1 XLOC_104168 Coding TCONS_00172592 XLOC_104168 Coding Coding PDE4DIP 3:22967139-23064421 j TSS128511 3157 1 TCONS_00172592_4 922 22 0.967773768772936 0.00122208095191113 1.29524676122136e-14 0.00038651558953266 2.62477362657783e-05 0.000662020089498056 3.71776868931189e-32 0.000350335667671227 0.000325783075116441 0.00114634499540456 5.4130103381524e-05 4.38329456212249e-67 1.62816357592212e-05 0.000133223506840121 0.000208650039520959 1.44743558273787e-06 1.02717620602697e-41 3.09987189323023e-58 1.36081840348264e-15 0.000532563824139903 0.000696180313572206 0.00012678830947942 0.000612275881498998 1.05196693379603e-08 2.32925202702287e-44 0.000450392718489205 0.000983140731456879 0.000974152945848365 1.06180843147075e-48 4.78650826735908e-06 1.01938404617342e-306 XM_005197750.1 PDE4DIP PREDICTED: Bos taurus phosphodiesterase 4D interacting protein (PDE4DIP), transcript variant X8, mRNA. 0.0 5038 100.00 0.884383908774153 XM_005277454.1 PDE4DIP PREDICTED: Homo sapiens phosphodiesterase 4D interacting protein (PDE4DIP), transcript variant X13, mRNA. 0.0 3862 90.53 0.889768767817548 TCONS_00172592_4 sp|Q5VU43|MYOME_HUMAN MYOME_HUMAN Myomegalin; 0.0 1578 89.70 0.978308026030369 1 coding 0 0 0 0 -0.0271576364298076 0.852224506325773 0.0260527313376867 0.589179604145017 CTCTTTCTTTGGAGGTAGCTCAGCACCTCAATGACCTGAAGAAGGAGAACTTCAGCCTCAAGCTGCGCATCTACTTCCTGGAGGAGCGCATGCAGCAGAAGTATGAGGCCAGCCGGGATGACATCTACAAGCGGAACATCGAGCTGAAGGTTGAAGTAGAGAGCCTGAAACGAGAACTCCAGGACAAGAGACAGCATCCGGATAAAACATGCGCTGATGCAGAGAATATCAACAGCCATAATGAAGCTGAGCTCCGGCGCCAGTTTGAGGAGAGACAGCAGGAGACGGAGCATGTTTACGAGCTCCTGGAGAATAAGATCCAGCTTCTGCAAGAGGAGTCCAGACTAGCAAAAAATGAAGCCGCACGGATGGCGGCTCTGGTGGAAGCAGAGAAAGAGTGTAACCTGGAGCTCTCAGAGAAACTGAAGGGAGTCACCAAGGAGAGGGAAGATGTACCAGGAGACCGGGTCAAATCTGACCAGTACACTGAGGCCCTGGCCCAGAGGGACAAAAAAATTGAAGAACTGAGTCAAAGCCTGGCTGCACAGGAGAAACTTGTAGAGCAGCTGTCTCAAGAGAAACAACAACTGCTACATCTGTTGGAGGAGCCAGCTGACATGGAAGTGCAGCCCATGACTGAAGACTTACTCAAACAACAGAAGTTGAATTCAAATGAGACCGGTACAACTCAGCAGTCTGTATCTGATTCCCATCTGGCAGAACTCCAGGAAAAAATCCAGCAAACAGAGACCACCAACAAGATGCTTCAAGAAAAACTGAATGAAATGAGCTATGAACTGAAGTCTGCTCAGGAGTCATCTCAGAAGCAAGATGATACAATTCAAAACCTCAAGGAAACTCTGAAAAGCAGGGAAAGTGAGACCGAGGAGTTGTACCAGGTGATTGAAGGTCAAAACGACACAATGGCTAAGCTTCGAGAAATGCTGCACCAGAGTCAGCTTAAACAGCTTCATAACTCAGAGGGTACTTCCCCAGCTCAGCAACAGGTGGCTCTGCTTGATCTTCAAAGTGCTTTATTCTGCAGCCAGCTTGAAATACAGAAGCTCCAGAGGGCAGTACGCCAAAAAGAAAGGCAGCTGGCTGATGCTAGACGATGTGTGCGGTTTGTAGAGGCTGCAGCACAGGAGAGAGAACAGCAGAAAGAGGCTTCTTGGAAACATAACCAAGAATTGCAAAAAGCCCTACAGCAGCTACAAGGAGAACTTCAGAGTAAGAGCCAACAGCTTCATACCCTGGAGGCTGAAAAATATAATGAGATTCGCACCCAAGAGCAGCACATTCAGCACCTCCACTACAGTCTGAGTCACAAAGAGCAGCTGCTTCAGGAATTTCGGGAGCTCCTGCAGTACCGAAATAACTCAGACAAAACCCTTGAAGCAAATGAAATGTTGCTTGAGAAACTTAGGCAAAGAATACAAGATAGAGATGTTGCCCTAGAGCGGGCTATAGATGAAAAGTTCTCCAGCCTAGAAGAAAAGGAAAAAGAACTGCGTCAGCTTCACCTTGCCATGAGAGAGCGAGATCACGACTTAGAGAGGCTGCGCGGTATCCTCTCCGCCAATGAAGCTACCATGCAGAGTATGGAGAGTCTCCTGAGGTCCAAAGGCCTGGAAGTGGAACAGTTGTCTGCCACCTGTCAGAACCTCCAGTGGCTGAAAGAAGAAATGGAAACCAAATTTAGCCGTTGGCAGAAGGAGCAAGAAAGCATCATTCAGCAGCTACAGACATCTCTGCATGACAGGAACAAAGAAGTGGAGGATCTTACCGCAACATTGCTCTGCAAACTTGGACCAGGGCAGACTGAGATAGTTGAGGAGCTGTGCCAGCGTCTACAGCAGAAGGAAAGGATGCTGCAGGACCTTCTGAGTGATCGGAACAAGCAAGCAGTGGAATATGAAATGGAGATTCAGGGCCTGCTTCAGTCCATGAGCACCAGAGAGCAGGAGAGCCACGCTGCTGCAGAAAAGATGGTACAAGCTCTAATGGAAAGAAATTCAGAATTACAGGCCCTGCGCCAATATTTAGGAGGGAAAGATTTCATGATGTCCCAAGCACCCCTCTCTAACCGACCAGCTGAAGTTACCTCCATCAGCCCCCATCTTGGAGAGCAAACTGATCAAGGTTCAGTGCATATACCCTCCAGAGATGATAGCACTTCATTGACTGCCAAAGGGGATGCTAGCGTACCCAGGTCCTCGTTAGGGGAGGTGGATACAGTTGCGGGGCTGGAAAAAGAACTGAGTAATGCCAAAGAGGAACTTGAGCTCATGGCTAAAAAAGAGAGAGAAAGTCGGATGGAACTGTCTGCACTCCAGTCCATGGTGGCTGTGCAGGAGCAAGAGCTGCAGGTTCAGGCTGCTGACATGGAGTCCCTGACCAGGACCATACAGATTAAGGAAGACCTCATAAAGGACCTGCAGATGCAGCTGGTTGATCCTGAAGACATCCCAGCTATGGAACGCCTGACCCAGGAAGTCTTGCTTCTTCGGGAAAAAGTGGCTTCAGTAGAATCACAAGGACAGGAAACGTCTGGAAACCGAAGACAACAATTGCTGCTGATGCTCGAAGGACTGGTAGATGAGCGGAGTCGGCTCAATGAGGCCTTACAGGCAGAGAGACAGCTCTATAGCAGTCTGGTGAAGTTCCATGCCCATCCAGAGAGCTCTGAGAGAGACCGAACTCTGCAGGTGGAACTAGAAGGGGCCCAGGTGATACGCAATCGGCTAGAAGAAGTTCTCGGAAGAAGCCTGGAGCGCTTAAGCAGGCTGGAGACCCTGGCCGCCATTGGAGGTGGGGAACTGGAAAGTGTGCGAGTTCATCACGAGCATGGCTTCTGAGCACTGGCGGGTCAGACTGCAGCCCGGGATGGAGACCCTTGTGTGCACTAACCAGAGAGCCCTGTCTGAACTAAACGGTGACTTACTAATGCTAGAACTGGTACAAGTAGCATCACCTACGAAGTGAAACTCACTTTAGTCTACCTGTATTTCACTGTTCGTAACTGTCTCTAAGTTGAATGGTGGAGGTTACAAGGTATATTTGCACACTCTAAATCATTCCTTTTTAGTTTCCTCACCCCTCCTTCCTTCTTTTCCCTTATCCCTTCTATGGGCCAATAAAGTTTATTCCTCCCCCA EMBV3_28128 ACAGTTGGGGGACAGAAGAGGATAAAGCACTTTGAAAAACTCTCCCCAAGTGAGAAGTCC Gene BVT0102_375232 + 0 NULL GK000020.2:8067502-8369054 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113236 TCONS_00113235 1 XLOC_068981 NonCoding TCONS_00113236 XLOC_068981 NonCoding NonCoding - 20:8076417-8086854 - TSS84749 509 0.528487229862475 4 0.951609812188578 0.00243164990271019 1.09901748612233e-17 0.000320327646805655 0.000635498826082698 0.00143674492073777 0.000886448192941993 0.000202518726085106 0.000750365701935239 0.000168185606599763 0.000144012360832119 3.14985168753846e-128 0 0.000290682267477308 0 2.04333576988146e-16 0 0 0 0.00190224577898419 0.000553440117404105 7.69799590394512e-10 0 0 0 0.000761477336927584 0.00135991270722895 0.00138281040326226 0 7.48302235285206e-10 0 0 noncoding 0 0 0 0 -0.0904637328878095 0.761609645186024 0.0379685658688609 0.554990935087762 GGGTCCGTACCAGGTGAGACCAGAGGACCTTAGTCTGGGAGATTTTTTTCTTGGGTGCTAATGTCCTTCAAGTTTGTTGAGACTGGTCACCTACGCTGTGAGGAGGCCCAGGCCTCTGAAAAGGTCACTTGGTGTTCCAGCTGAGTCCCAGGTGACAGCTCTCATCAACTGCTGGAGGCATAAATAAAGACACTTCCAGACGATTCCTGTCCACAGCCCCGAGTCCCCCCAGCCTTCAAGTTCTCCTAGCTGAGCCCCCATATAAGGTATTGTGCAGGAGATAAAAGGGAAGATTTCCAAGCTCACCAGTGGTGTTAAGAAGTGAGAGGAACCACTTCATACTCATTAGAATGACTACTTCAAAAGATGAAACAACAGAAAACAACAAGTGTTGCTAAAATATTACAGTTGGGGGACAGAAGAGGATAAAGCACTTTGAAAAACTCTCCCCAAGTGAGAAGTCCTTGTCATCCTCTCCCCATTCTAAAGAACCACCAGTTTTATTTACC TCONS_00113229 s 3' 8917 TCONS_00113229 s 3' 8917 EMBV3_09576 CCGCTCTTGTAGCACAGAGTGCAGCCATAGGAAGTGCAGAAGCAAACGTGTTCAGTGTTC Gene GeneID:783502|LOC783502:XM_002697325:240_cdna Constitutive 0 NULL GeneID:783502 23 GENE LOC783502 NULL similar to ubiquinol--cytochrome c reductase EMBV3_12824 TTGTCCCAAGGCCTTCCCGTACCGTCCAGGAGGGCAAGTGTCCAGAGGATGGTTGGGATG Variant GeneID:518874|SEPSECS:XM_002688175:105_cdna 56^250 1 EMBV3_12681 GeneID:518874 6 GENE SEPSECS NULL Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase EMBV3_25160 AGTAGAAAGGGTAGTTGCCAGATTCAGGGAGTGAGGTATGGGGAATTCATTTTTAATGGG Gene BVT0101_008582 + 0 NULL GK000005.2:98220669-98412608 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09751 GAGCTGCTAGTACAAAGAGGTGGACCGGTATCTGGTGTAGTTGGTATTCACAGAATCTAC Gene GeneID:616788|LOC616788:XM_002698418:367_cdna Constitutive 0 NULL GeneID:616788 26 GENE LOC616788 NULL similar to growth inhibition and differentiation related protein 86 EMBV3_19721 GAAATAATGCAAAATTTAAGTAGTATACAGTGACTAAGGTAATAAAGCAAAAACTATTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41755 ACGGCGGAGTGCGGGATTTTTCTGCATTTTGTGTACCAACATTCGGCCAGGAGAGACTGG Variant GeneID:511387|KLHL20:NM_001076835:94_cdna 88^151 3 EMBV3_14227 GeneID:511387 16 GENE KLHL20 MGC142776 kelch-like 20 (Drosophila) EMBV3_13167 TCATCCTTGGTCTCCTGTTCCTGCTTCTGTTGGTGACTGGAGCCTCTAGCTTTCACCTTT Gene GeneID:515155|LAG3:XM_002687866:110_cdna Constitutive 0 NULL GeneID:515155 5 GENE LAG3 NULL lymphocyte-activation gene 3 EMBV3_16410 GATCCACAAGGACTCAGGGACAACAGTCAGCCCAAGGGTCACCACTGGGAAACTGAGCAG Variant GeneID:511022|IL23A:XM_002687579:639_cdna 444^590 1 EMBV3_32441 GeneID:511022 5 GENE IL23A IL-23 interleukin 23, alpha subunit p19 EMBV3_21141 GGGAAAAAATTCTACCACAAATCAGCCTTCAACAGCCATCAGAGAATTCACAGGAGAGGG Gene GeneID:511194|ZNF12:NM_001110071:143_cdna Constitutive 0 NULL GeneID:511194 25 GENE ZNF12 MGC179420 zinc finger protein 12 EMBV3_33222 TTGGCCGCCTCGATGCAGGAGGACGAACAGTTACATTATTGAACAAGGAGTATGTTATTT Variant GeneID:614775|SEC22B:NM_001076343:74_cdna 243^352 1 EMBV3_14556 GeneID:614775 3 GENE SEC22B MGC127664 SEC22 vesicle trafficking protein homolog B (S. cerevisiae) EMBV3_16450 CTGGGTGAGAAGATGACAGAGGAAGAAGTAGAGATTGTGTATGTAGCCCGGACGCTTCTA Variant GeneID:281341|MYL6:NM_175780:893_cdna 406^572 10 EMBV3_05147 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_13005 AAGAGGACGCCTTACTTTACCAGAGCAAGGGTCCGTGATGACAATCTTTTCTCTTTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42231 GCATCCCTTGAAGCTGTGAGCTATGCCATTGATGCTTTAAAAGCCAGGGTGCCCATATGG Gene GeneID:507986|MOCS2:NM_001014867:64_cdna UTR3_Alt 5 NULL GeneID:507986 20 GENE MOCS2 NULL molybdenum cofactor synthesis 2 EMBV3_16936 CCACTCTTACTAACACCTGACGGTAGCTACCCCTGTGCGGGATACTCAGGATGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_22003 TGAGTAAATGGTGGCCGGGGAGGGCCTGCGATGTCGCTGACCAGACAGGATGGCAGCTTT Gene BVT0102_160801 + 0 NULL GK000003.2:21112566-21205741 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06414 GGACAGACTACTAAAGCCCGGTTCTTATATGGAGAGAACATCCCCCCTCAAGACACAGAG Gene BVV0101_030936 - 0 NULL GK000009.2:19881704-19963214 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234863 TCONS_00234854 TCONS_00234860 TCONS_00234862 TCONS_00234855 TCONS_00234857 TCONS_00234858 TCONS_00234859 TCONS_00234853 TCONS_00234852 TCONS_00234861 TCONS_00234856 1 XLOC_144112 Coding TCONS_00234861 XLOC_144112 Coding Coding LOC100847721 9:19943138-19960788 j TSS176219 1505 1 TCONS_00234861_3 410 0.0803986710963455 12 0.915405972009746 0.0423525322696756 0.0631154105458187 0.0399429237089488 0.0340878481464676 0.0423417239013359 0.0125211572270483 0.0297257286584972 0.0291775528191877 0.0393943643308151 0.00543442766645859 0.00226330257359308 0.00237043610551984 0.00232125468975024 0.00566586284859176 0.0021990969915665 0.0434945552168326 0.0224380481038793 0.0573218722333618 0.0696333482749118 0.0484599017576797 0.0213975563358321 0.017119085988482 0.0170746776486546 0.0204905972704122 0.0557401566080717 0.0659019312982394 0.0305859695178405 0.00266235807898712 0.00227806948097896 0.00345215776708395 XM_003586456.2 LOC100847721 PREDICTED: Bos taurus dual specificity protein kinase TTK-like (LOC100847721), mRNA. 0.0 2468 100.00 0.908305647840532 XM_005248764.1 TTK PREDICTED: Homo sapiens TTK protein kinase (TTK), transcript 0.0 1499 86.90 0.819269102990033 TCONS_00234861_3 sp|P33981|TTK_HUMAN TTK_HUMAN Dual specificity protein kinase TTK; 0.0 681 82.24 0.997560975609756 0 coding 1 1 1 1 0.184352225559666 0.272562587780215 0.0215911361192241 0.760451214299068 TGTGTGTGGAGAGGGGCTGGAGTTTCCATCTTTTCTTCTCAGCTCCGCTTTTCCGTGGAGAGGCCTACCTTGGCGGCGAACGGAGGGGCGGAGGCGGCCGGGGTCTGTGGGCGCTTGAGCCGAGCCGCGCGGGCCGAAATGGAGGCTGAGGAGTTAAGTGGCAAAGAGTTGACAATTGATTCCATAATGAACAAAATGAGAGATATTAAAAATAAATTTAAAAATGAAGATCTTACTGACGAGCTAAGCTTGACTAAAGCCTCCACTGATACTACAGATAACTCAGGAACTGTTAACCAAATAATGATGATGGCAAACAACCCAGAGGATTGGTTGAATTTGTTGCTCAAACTGGAGAAAAACAGTGTCCCTTTAAATGATGCCCTTTTAAATAAATTGATTGGTCGTTACAACCAAGCAATTGAAGCACTTCCTCCAGATAAATATGGCCAAAATGAGAGTTTTGCTAGGATTCAAGTGAGATTTGCTGAACTAAAAGCTATTCAAGAGCCAGACGATGCACGTGACTACTTCCAAATGGCCAGAGCAAACTGCAAGAAATTTGCTTTCGTGCATATATCTTTTGCACAGTTTGAACTATCACAAGGTAATTTCAAAAAAAGTAAGCAACTTCTTCATAAAGCTGTGGAATGTGGAGCAGCGCCACTTGAAATGCTGGAAATTGCCATTCAGAATTTGAACCTTCAGAAAAAGCAGCTGCTTTCAGAGGAGGAAAGGAAGAGTTTATCTGCATCTACAGTATCAAGTGCGCAAGAACCATTTCCCAGTACACTTGGACATTTACAGAATAGGAACATTAGCTGTGATTCTAAAGGACAGACTACTAAAGCCCGGTTCTTATATGGAGAGAACATCCCCCCTCAAGACACAGAGATAGGCTATCGAAATCCCTTGAAACAAACAAGCAAGGCTAAACGGTCATGCCCATTTGGAAGAGTCCCAGTTAACCTTCTAAGTAGCCCAGATTCCCATGAGAAGATGGATGTTTCAGTTGCACCACATTTTACTAAAAGACATATCTCTGGGTCAGAGTGCCGAGATACAATCACACCTGGATGTAAATCAAGTGGAAATGATTCCAGCGAATTGAGACATTTAAAGTCTGTTCAAAATGTTCGTTCCAAGGAACCTGTGATATCAGATGAGAAGAGTTCTGAACTTATTACTGATTCAGTAACCCTGAAGAATAAAAGTGAATCAAGTTTTCTAACAAAATTAGAAGAAACTAAAGAACATCAAGAACTAAAGGTTCCAGAAAGTGAACTGAAACAACGGCAATCAAAGAGAAAGTCTGAATGTGCAAACCAGAATGCTGCTGCATTTTCCAGTCAGTGGCAGATTCCAGAGTAAAAACTAGTGAACTTTGGGAAGGTCATGTAAAAACTGCTATATGTAAAATGGATAACCAACAAAGACCTATTGTATAGCACATAGAACTCTGCTCAGTGTTATGTGTCATCCTGGATGGAATGGGAGTTTGGGGG EMBV3_08397 GGACCAGCTTCTAAGACAAGGCTTCCTCCCTCTGAACACACCTGTGGAGAAAATAGAGAG Gene GeneID:527119|LOC527119:XR_084600:2_cdna Constitutive 0 NULL GeneID:527119 17 PSEUDO LOC527119 NULL similar to KIAA0318 EMBV3_30757 GGTACCAGGTTCACACCACCCTGGGCCTACTAGGGACAGGAAATGGAGAGTAACATCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10728 GGCGCCATGTTCACCAACTCTGGAAATTTAATCGTGCACCTGAGGAGTCTGAACCATGAA Gene GeneID:540532|ZBTB44:XM_002699251:275_cdna UTR3_Alt 2 NULL GeneID:540532 29 GENE ZBTB44 NULL zinc finger and BTB domain containing 44 EMBV3_32778 CCTATCTGACTTTCCAGAGGGTTGACATAAGTTACTGCACAGATTGCATCAGTACTGCAG Gene GeneID:780876|MAD2:NM_001079796:20_cdna Constitutive 0 NULL GeneID:780876 6 GENE MAD2 MGC134409 mitotic checkpoint component Mad2 EMBV3_01435 TTCCTAGCCAGCATCACTCTGGGGATCTGCTGCTCTGCGTCTGGCTTTGGACCTTTCAGA Gene GeneID:512686|SLC9A5:XM_002694818:688_cdna Constitutive 0 NULL GeneID:512686 18 GENE SLC9A5 NULL solute carrier family 9 (sodium/hydrogen exchanger), member 5 EMBV3_12766 CTTGGCCGTGATGACTCAGAAGATGGCTGAGAAAGACACCAAGGAAGAAATCCTGAAGGC Gene GeneID:512850|CETN1:NM_001079506:95_cdna Constitutive 0 NULL GeneID:512850 24 GENE CETN1 NULL centrin, EF-hand protein, 1 EMBV3_31717 TCCCTTCTTGTTGTTATGCAACACCTGGCAAAGAATGTGGTCATGGTGAACCGTGGGCTC Gene GeneID:327679|CCNB1:NM_001045872:66_cdna Constitutive 0 NULL GeneID:327679 20 GENE CCNB1 NULL cyclin B1 EMBV3_31827 CAAGGTGACCAAGGGCCAACCCCTGTGTGTGCTCAGCGCCATGAAGATGGAGACTGTAGT Gene GeneID:338471|PC:NM_177946:488_cdna Constitutive 0 NULL GeneID:338471 29 GENE PC MGC137293 pyruvate carboxylase EMBV3_35876 GCTGGAAACCGTGGGGAGCATTTTCACGCGGAAATTTTATGCAGCCTATGGATCTGGTCC Variant GeneID:515228|MRPS23:NM_001046192:24_cdna 71^241 2 EMBV3_14086 GeneID:515228 19 GENE MRPS23 MGC134172 mitochondrial ribosomal protein S23 EMBV3_10667 AACGTTTATACCCTGTGATTACTCGGGGAAAGGGAGTGTTAGCGGCCCTTGTCTTCCTCA Gene GeneID:523618|IER5:XM_002694216:84_cdna Constitutive 0 NULL GeneID:523618 16 GENE IER5 NULL immediate early response 5 EMBV3_03101 GGGGAACAGTTATAGTTCTCTCCTCCAAAATAGCAATTTGTAGAGTTAATATGATTTTTA Gene BVT0101_037346 + 0 NULL GK000028.2:25005003-25013010 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160389 TCONS_00160392 TCONS_00160386 TCONS_00160391 TCONS_00160387 TCONS_00160390 TCONS_00160385 TCONS_00160388 1 XLOC_097640 Coding TCONS_00160386 XLOC_097640 Coding Coding SLC25A16 28:25011775-25038981 j TSS119953 2226 1 TCONS_00160386_2 198 8 0.918470869325492 0.000248632163398267 0.00119951355180971 0.000526706051427068 0.000929750699923085 0.000543985463749832 0.000781102593210569 0.000664428542613889 0.000229795880135517 0.00209929398877974 0.00033031702732726 0.000161558407669076 7.51840884968533e-12 0.000424656335751162 1.48957943023542e-10 0.000352551039885304 0.0021363385308733 1.51625137685132e-07 0.00138796368811801 0.000886207629612453 0.000198234314748873 0.000831913550224667 0.00022284309102544 0.000634786467808751 7.79082346850351e-05 0.000615468896515923 0.000512969339936598 0.00055594979627406 1.27635816032546e-06 0.000230687711216015 0.000409082608036739 NM_174672.2 SLC25A16 Bos taurus solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 (SLC25A16), mRNA. 0.0 1555 100.00 0.386792452830189 XM_005270182.1 SLC25A16 PREDICTED: Homo sapiens solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 (SLC25A16), 0.0 1454 85.82 0.550314465408805 TCONS_00160386_2 sp|Q01888|GDC_BOVIN GDC_BOVIN Graves disease carrier protein; 4e-143 407 100.00 0.994949494949495 1 noncoding 0 0 0 0 0.136504837461687 0.661856141996028 -0.0509935283339108 0.387297593358091 ATGAATTTTATTGGAGTGAAGTAAGGAGCCATTACAGGTATTGCTGGATGCTGTGCCAAAACAACAGTTGCTCCCTTGGATCGAGTAAAGGTTTTGTTACAAGCTCACAACCACCATTACAGACATTTGGCTAATTACTACAAAACTGGGAGTTTCTGGTCATGTGCACAGATTAATGGCTGGATCCATGGCAGGTATGACAGCAGTTATCTGTACTTACCCTCTTGACATGGTTAGAGTACGCCTAGCATTCCAGGTGAAAGGGGAACACACTTATACAGGAATTATTCATGCATTCAAAACGATTTATGCAAAGGAAGGTGGTTTCCTTGGATTTTACAGAGGCTTGATGCCTACTATATTAGGAATGGCTCCATATGCAGGTGTTTCATTTTTTACTTTTGGTACCTTAAAGAGTGTTGGGCTTTCCTATGCTCCCACCCTTCTTGGCAGACCTTCATCAGACAATCCTAATGTCTTAGTTTTGAAAACTCACATAAACTTACTTTGTGGAGGTGTTGCTGGAGCAATAGCACAGACAATATCCTACCCATTTGATGTAACACGTCGGCGAATGCAGTTAGGAGCTGTTCTTCCAGAATTTGAAAAGTGCCTTACCATGCGAGAGACTATGAAGTATGTCTATGGACACCATGGAATTCGAAAAGGATTATATCGTGGTTTATCTCTTAATTACATTCGCTGCGTTCCTTCTCAGGCAGTGGCTTTTACAACATATGAACTTATGAAGCAGTTTTTTCACCTCAATTAAAAAAAATCATGATTTCTTTTCCTTTATAAACTCTCAGAGGGAAAAATAAAATGTTAATTTAATTTGGGGGAGAACATTACTTGAAGGGGGATATTTACCCTGTCACAGGAACCACTGGTATTTTAGTACTTGATTTTTCTATTCATCACAAATCAAAAGTGCTTACTATACTTTTTGATGCCAGTAGTTATATTTTAGAACATTGCAAAAAAAAAAAAATTCCTAAGCTGATGCTGGTTAATCAGTAAGGTTATTGGAAACCATTTTAAAGTGTTATTTGAAAGTAGAACTAACTTGAATTCAAGAGGTTGCCATTAGTTTTATTATGCTATTCCAAGCTTTTAATTATAATCATGATTTTCAAAGACTGTAACATTGGTTTTTGTTATTATAATAAACAGGCTTGGTTATATTACAGCAGAATGATGAGAACTGACATTTTAAGTTATATGAAACATAGGTTAGAAGCCAGCATTGAAGTATTATTCATATGTCTCTTCTCATAATTCTGCTCCACTGGATAGAAGGACAAACACTTTTTCTCTTCATTTTTGATAAATATTGTATTTAAAAAGTAGCCATGTAAGTAGCCATCAGTAAGTCACGAATTTTCAGGTCTTGCTCAAATGTCATTTCCAGTTTCTGAGTGATTTAAGTGTGTTTTTAAATTTCACTGTATTTCCCAAGGGCAGTAATAGTAAATATTGAGTATCTTTGCTCTCAAAACAAATTAGCATTATAGATTTGTTTTTGTTAGATGATTTGGTGTATGTTAGAAAATTTATTTAAGTGGACTGTGAAATATCCATTAATATAGATGTGAATGTTGAAGAATGTTTCCGAGGTATTATGTTATGACACATCAACTAGTTCTTCCACATAAAGTAATTTAGTGCAATATAAACTTAAGTAGAAATGTAAAACATGAGCTCAATTGCTATCCTTTATAGTATAATGGTTTAAAATGTAGGAATTCCATTTATTATGTTCAGAGTACTTTTTTATGTTTTATTGTAAGCATGACAAAAAATGAGAGGGGAACAGTTATAGTTCTCTCCTCCAAAATAGCAATTTGTAGAGTTAATATGATTTTTAAGGCATTAGAAAACTAAGTTGAAAGTGTTATTTCTGTTTCAATTTTTATTTTTTTTTTTGCATAAAGATTTCTTGTCATATCTTGGTGAAATTATATGAACTGGTTTCATTTTCAAAGTCTTTATTTTACAATAAATGTTTATCTTTGTATGATTTATAAGTATACCCACAGGTGTACATGTGTTCCTAAAACTATTTTGTATATTTTCATTTGTGGGCTACACTGTAGCTAAATACTGTTATCAAATCTCAAGATAATTTAAATGTATAAAATAAGTATCTCAGTTATGTTATCAATAAAGGAGGACTGCAAATATTTTTTTAAATAAAAATTTGCATTCTATATCTGTTACAGAGTA EMBV3_23296 CTCCAGATCTTGTGGTTTATTATCATTGTCTTCGGCTCTTCAGTACCTTCTCTGTGTTGG Gene GeneID:513495|KLRAQ1:NM_001103093:98_cdna Constitutive 0 NULL GeneID:513495 11 GENE KLRAQ1 CCDC128 MGC151568 KLRAQ motif containing 1 EMBV3_24159 ACGCTTCGGACTCGCAAGGAGCCCTCAGACGGAAGGACTGCTTACCTTTTGGATCCTCTT Gene GeneID:100301210|LOC100301210:XM_002696862:29_cdna Constitutive 0 NULL GeneID:100301210 22 GENE LOC100301210 NULL hypothetical protein LOC100301210 EMBV3_09556 TGGACCTGGAGAGTGTCATATTGAACGACATACGTCAGACGGAGGAGCAGAAGCACCTTC Gene BVV0102_457602 + 0 NULL GK000019.2:19877350-19884701 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095514 TCONS_00095525 TCONS_00092564 TCONS_00092567 TCONS_00092568 TCONS_00092570 3 XLOC_057733 XLOC_057734 XLOC_056922 Coding TCONS_00095514 XLOC_057733 NonCoding NonCoding LOC786299 19:19845425-19923846 o TSS71191 1057 1 TCONS_00095514_1 95 0.926206244087039 2 0.986546799285897 6.3583920678574e-05 0.000117246553107911 3.2101552149744e-05 2.24788680433384e-05 4.37501251548647e-05 2.2561065932229e-06 7.01213980307351e-05 4.61627682749624e-05 0.000388063136835153 0.000142209794994611 9.39313396316338e-06 1.78597620922536e-08 1.64275403954049e-09 3.78996796094936e-05 2.08829109396333e-05 0.00330568382439761 3.89712674057775e-17 0.00101789092542294 0.000109698130459704 1.43443528367943e-07 1.2902314218068e-14 0.000857870972821632 0.000806819135403794 0.00144368475948776 2.70649401685577e-24 8.48467353278391e-05 2.77098767813802e-05 9.1747909677875e-05 0.000223472311648902 0.000271803359885994 XR_233040.1 LOC101908852 PREDICTED: Bos taurus uncharacterized LOC101908852 (LOC101908852), 7e-73 279 77.53 0.335856196783349 0 noncoding CTATGAGTTTGAGTAGGCTCCGGGACTTGATGATGGACAGGGAAGCCTGGCGTGCTGCAGTCCATGGGGTCACAAAAATTCGGACATGACTGAGCGACTGAACTGAACTGAACTGAAGGAGGCAAAAACTGTAAAAACAGGTACCAAAGTTATTACTGGAGACATACAGAAAGAGTTCGTTTATTTAAGAGGGAAGCAAGGCGGAAATATACACCCAGAAAGGAGTGCAGGCGTCCTGAATGAGCAATACAAAGAAGCTAGGCTAGGGATTTAACATACACATACATGTCTCTATCTTCCCTGGTGGCTCAGTTGGTAAAGAATTTGCCTGCAATGCAAGAGACCCGGGTTCAATCCCCGGGTCAGGAAGATCCCCTGGAGAAGACAATGGCAATCCACTCCAGTATCCCTTGCCTGAAGATTTCCATGAACAGACGAGCTGGTAGCTTACAGTCCATGGGATCCCAAAGAGTCGGACATGACTGTGTAACTAACCTTCTTTCACTTTCACTTCCATACATGCATCTTTTCTTCCCCAGCTCCCCTCCCATCCCCACCCAGGCTGCCACATAACATTGAGCAGAGTTCTATGTGCTATACAGTAGGTCCTTGCTGGTTATCCATTTTAAATAAATCAGTGTGTGCATGTTGATCCCAGACTCCCTAACTATCCCTTCCCCCCATCCTTTCCCCCTGGCAACCATAAATTCATTCTCTAAGTCTGTGAGTCTCTTTCTGGTTTGTAAGTAAGAGCACTTGTATCACGACTTTTTGGATTCTGAGTATGAAGGACCTCAGAAGGTGTTTCTGCTCCTCTGTCTGACGTATGTCGTTCAATATGACACTCTCCAGGTCCATCCATGTTGCTGCATAGGGCACTGTTTCATTCTTTCTGAGGCTGAGAAATACTGCCCTGTGTATATGTCCCACATCTTCTTTGCCCATTCATCTGTGGGTGACGTGTAGGTGGCTTCCAGGTCCCGGCTACTGTGAGCAGCGCTGCCGTGAACACAGGGTGCACGTGTCCTCTCAGACCATGTGTCCTCAGAATCGCCAG TCONS_00092566 r 5' 16 TCONS_00092570 r 5' 0 EMBV3_11525 CCCAGTGCGGGTTCTCACGAGCCTTTTGTCTTTCCGGACCAAGATCCTTAACCTTTGTCA Gene GeneID:615835|LOC615835:XM_002698921:135_cdna Constitutive 0 NULL GeneID:615835 28 GENE LOC615835 NULL similar to Uncharacterized protein C10orf11 homolog EMBV3_21980 AGGAGTGCGGAATGTTCTTGAGTGTATTATTTATGCAGGTTACAATCACTTTTGCCATCC Gene GeneID:515180|MFN1:XM_002684903:32_cdna Constitutive 3 NULL GeneID:515180 1 GENE MFN1 NULL mitofusin 1 EMBV3_25782 GGTATTTCCATGCCAATCCCAGCACCCATCTGTTATGGAGAAAACAGTCCCAGGGTGTGT Gene BVV0102_052503 + 0 NULL GK000003.2:10648920-10652454 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171957 TCONS_00171961 TCONS_00171960 TCONS_00171963 TCONS_00171958 TCONS_00171964 TCONS_00171959 TCONS_00171962 1 XLOC_103971 Coding TCONS_00171958 XLOC_103971 Coding Coding CADM3 3:10650063-10665250 j TSS128166 3960 1 TCONS_00171958_3 374 10 0.739892005794811 0.000532181644565086 0.00153979249996289 0.00116054858609968 4.72945863608636e-19 1.16026243384595e-22 0.000504196525399002 6.93423229944938e-05 2.66147739940925e-17 1.17220118871403e-22 6.97440393498914e-18 4.8236776379481e-14 7.21637385330945e-13 1.32571643087277e-05 0.000544560697923796 9.31161904160853e-27 0.00188302670910136 2.19030061771029e-134 4.67787677191914e-08 9.50319210995104e-17 1.21823892938799e-20 3.91245910672685e-05 2.81001484317513e-15 0.00026306872642312 0.000360151455587166 0.000101872834391686 0.000366123814620886 0.000281087989477505 2.64467989760627e-12 3.65867709418548e-05 1.37943390915297e-33 XM_005203516.1 CADM3 PREDICTED: Bos taurus cell adhesion molecule 3 (CADM3), transcript 0.0 2756 99.93 0.386363636363636 NM_021189.3 CADM3 Homo sapiens cell adhesion molecule 3 (CADM3), transcript variant 0.0 3177 80.39 0.842676767676768 TCONS_00171958_3 sp|Q8N126|CADM3_HUMAN CADM3_HUMAN Cell adhesion molecule 3; 0.0 702 95.71 0.994652406417112 7 coding 1 1 1 1 -0.0281458302870519 0.800908695605713 -0.0126947525834612 0.838613228844788 GAGGGCGGAGGAGAACTTGAGAATCTAAACTCTGGATAGAAGGCTACTGGCAAGAGCAGAATTTGGAGCTGGGAGCTCTGGCTCCACTCGACGAGGCCATCAGCTCCACAGTCTGGAGCAGCCCTGACATGCTGGCCAGTCAAGACAGTCAGCCCTGGACATCTGATGAGACAGTGGTGGCTGGTGGCACCGTGGTGCTGAAGTGCCAAGTGAAAGACCATGAGGACTCATCCCTACAGTGGTCTAACCCTGCCCAGCAGACTCTCTACTTTGGGGAGAAGAGAGCCCTTCGAGATAATCGGATTCAGCTGGTTAAGTCTACACCCCATGAGCTCAGCATCAGCATCAGCAACGTGGCCCTGGCCGATGAGGGCGAATACACTTGCTCCATCTTCACTATGCCCGTGAGAACTGCCAAGTCCCTCGTCACCGTGCTCGGAATCCCACAGAAGCCTATAATCAGTGGCTACAAGTCATCATTACGGGAAAAGGATAAAACCACCTTAAGCTGTCAGTCTTCTGGGAGCAAACCTGCAGCCCAGCTCACCTGGAGGAAGGGTGACCAAGAGCTCCATGGGGAATCTACCCGAATACAGGAAGATCCCAATGGCAAAACCTTCACCGTCAGCAGCTCAGTCACCTTCCAGGTCACCCGGGAGGATGATGGCGCAGACATCGTGTGCTCTGTGAACCATGAATCTCTAAAGGGAGCTGACAGATCCACTGCTCAACGCATAGAAGTTTTATACACACCGACAGCGAAGATAAGGCCAGACCCTCCACATCCTCGCGAGGGCCAAAAGCTGTTGCTCCACTGTGAGGGACGTGGCAATCCCGTCCCCCAGCAGTACGTGTGGGAGAAGGAGGGCAGCGTGCCACCGCTGAAGATGGCCCAGGAGAGCGCCCTGATCTTCCCCTTCCTCAACAAGAGCGACAGTGGCACCTACGGCTGCACGGCCACCAGTAACATGGGCAGCTACAAGGCTTACTACACCCTCAACGTGAACGACCCCAGCCCAGTGCCCTCGTCCTCCAGCACCTACCACGCCATCATTGGAGGGATCGTGGCTTTCATCGTCTTCTTGCTGCTCATCCTGCTCATCTTCCTCGGTCACTACTTGATCCGACACAAAGGAACCTACCTGACACACGAGGCAAAAGGCTCCGACGATGCCCCAGATGCGGACACAGCCATCATCAATGCAGAAGGCGGGCAGTCGGGCGGGGACGACAAGAAGGAATATTTCATCTAGGGGCGCCCCCCAGGGACCTCATGGGGACGTCTGGGGCCATCACCAACCTGGACTTGTACAGAGCGACCCCAGGGCCGCCCCTCCCGCTTGCTCCCCAGCCCCTCCCCCACCCCCCTGTACAGAATGTCTGCTTTGGGTGCGGTTTTGTACTCGGTTTGGAATGGGGAGGGCGGGTGGGGAGGGAGGGTTGCCCTCAGCCCTTTCCGTGGCTTCTCTGCGTTTGGGTTATTATTATTTTTGTAACAATCCCAAATCAAATCCGTTTCCAGGCTGGAGGGGCACGGGTCCTGGGGTGAGGAAAGCAAAAAAAAAAAAACACACAAACAGAAAACCTGGAGTGTTAGGAGGAGGATGAGGAAAGGGTTAGAGCAGGAAGGAGCTGGGTCAGTTTGGTGGGGGGCTCTCACCAGCCCTCCATCATGAGAGCCTCTTCCTGGATTTCTCTGGGGTTGGGGAGGTTGTGAGCAGGAGGCACGGAGGTGGCTTTTCCTCTGTAAGTCGCCCACCTTGAGCTCTGCACAGAGAAGGTACCACCTGATGCCCCTCCCCCACCCTAACAGGAAAGGAGTGAATGGGGGCACCCCAGGAGATGTGACCTTCAGGTGGCATGCAGCCACGTGGGGGCCCAGGGCTTCCCCACGTGGGAGGATGCAGGTCCCTGCAGGAAGGGCAGATTTGGAGAGAAAGGATGGCAGAGATGGCCCTCTCTGGCCCCTCGCCCCACCACCAGGCCCCTATGGTGAATGAAGCCAGGCCCTTTTCCGTGGAACCACCCTTGGGGGATAGCAGAGCAAGGCGGCCCCTCCTTGCTCTAGCAGCTGTGGGGGAGGCGCTGCTCTGGGCCCTTAACTGCATCTGCTTCCCCGCCCGGGGGCCCCTGACTCTCTCTCGATGGAGCCCTGGACTGTTGCACGGCAACCACTTGTCTTAGGCACTGCTCAGCAACTTCGCCTCCCTGGCTTGTGCTGCCCTCTGCCCCCTCCTGTTCCCCAAGCCCTCCCTCCCTCCCTCAGCAGCCAGGCAGACAGAACAACAAAAATACTAAAAGGAGCTTCACTGCACTGAGCTGTTTCCTGCCCAAACGAAGGGAGTAGTAATGTGTGTGTCTGTGTGTGTCCGTGTGTCTGTGCACATGTGTATGTGAGTGAGAGGCAGAGGGGCTCCTGGGCAGGTGGGGGGCTGCGGGGCATGCGGAGGAGGGCTGTGGGAGCTGACAGTCCCTAGGCAGGCTGCGTACCTCACCTGGGATGTCGCTCCTTCCTGGTATTTCCATGCCAATCCCAGCACCCATCTGTTATGGAGAAAACAGTCCCAGGGTGTGTTTTTGCTCAGTCATCCATCTCATCTCTCCCTGAAACACAGGGCGTTCAACCTCTGCCTCTGTTTCCCCTTCTCGGAGCCACGGAGTCAGTGCCAAAGCCTTTGCTATGCATCCCTCAGGCCTCCCGCTGGCACTGACCCTGGAATGACCGCTGTCACTTCTTGTCCCCATAGTCTGTACCCGGTGCGTTGAGGGCTAGGAGCAAAACCGCCTGTCTCCTTCCCATCTCCATTCCATCCCTGCTTTTGATTTTCTGTCTTCCTTGTGGCCAAGCCGGTTGCCATGGAAACGAGGCCATGCGCCCTCCTCGCCCACCGGCCGCCCCACCTCAGACCCAGGGTGCCCCTTGGCACCCCTCTCACCCTCCTCCAGCATGTCCTGCTGTCCTGGCAACCCAGGGGCGTGCAAAGTGGAGGCAGCTGCAGCCAGCAGGTCTGCCCACCCCCTTCAGTTCAGGTAATACTGTCGTGAATCTTCCAGCCGCTGGTTAGGGCCCTGGGCCCCCTCCTCTTACAGCAGCAAGGCAGCCTAGGGCCCCAGGCCTGTGGGCTCCCTGCCTCCCAGCACCCGCTTTTGGGAAAATGACTCTTCCTCTTTGAGCTGAACCACTCTGTCCATATTACACAGAAGCCATATTTGTACCGGGGGGCGGGGGGAAACGGGCCGTTGTGCTGTGTGTGTCTGTCTGGGGGTGGGGGGCGGGGCAGGGAGCAGGGAGGCACCGTGTATCTTTATAATCTTTCTAACTCTCCTGTGCTGATCTCAGAGGGGCCACCCTCAATATATCTGGATTATCCGTGTCCTTGGGCTGCCTCCTTCTTGCCACTCTTGATCCTGTTGGGATGCGTGTGTGTAAGGGCTGTTCTGAAACCTGCTGCCTCCAGGGGTGGTGTGTGCCTTGCCAGGCCACTCTCTCCAGGGCGTCTTGTATGGAAACGACAGAACTCTTCTGTGGGAGAGAAGAGCGTTCCTTCGTGCCCTTTGGCCAGGTCCTTACATTCCAGTGTTGGGTGGGGTACCTGACTGCTCCCCAGTGTCCTCTGCCAGGCCGTGCTGGATAAAAAGGAGACCTCCGACACCATCCCAGGATCGCTTCAACAGACCCCCAAACTCCCTTTTCAATCCCCTTCATGTTGAACCTGAAGCTGAACCTAGTGTCCCAGGAAAAAGGAGACCATCCCGGCAAGGTGACCATTCCTCTGCGCCTCTGCTTCCACCTCCAACCGCCCCTGAGTGAGTGGGGAGGAGGACTTGGCAGAATTAGCGCTATGACACCCAGCGCCTTGGACAAACGAAGTAGTTTCACCTAACTAACCCTCTGTATCGTTCCAACTCGGATGCTCTATGAGTCACCCTTCCCTGTGTCCAGACTAAGCGTCCCCCAGT EMBV3_42483 AAACGGACGGATGCCGCAGCGCTCGTGATCCAGCATGCAAAGCGCCCCAGAACTTGTGTA Gene BVT0102_030029 + 0 NULL GK000006.2:109277167-109308176 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13253 AACCACGGCGTGTTGAAGATAACAATCTGTTGACCCTAAACATCAACCGCAAGCTCGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27924 GCCACGGTCGAAGTGAGTACGCCGAATGTTTACGCCGATCAGATTGAGTGGTTTTGTCGT Gene GeneID:100299915|LOC100299915:XM_002683895:2_cdna Constitutive 0 NULL GeneID:100299915 Un GENE LOC100299915 NULL hypothetical protein LOC100299915 EMBV3_06871 CTCTGCGCTATGGTTTTCTCTCTCCTGGCAGTGTAAGGTTAAAGTAGCTCCAGGCTCAGC Gene BVV0102_139394 - 0 NULL GK000004.2:41067243-41160157 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181395 TCONS_00181393 TCONS_00181392 TCONS_00181394 TCONS_00183730 2 XLOC_110596 XLOC_111201 Coding TCONS_00181392 XLOC_110596 Coding Coding - 4:41009697-41071634 - TSS135776 7585 1 TCONS_00181392_2 767 0.253263019116678 3 0.877583311805735 0.041985553842369 0 0.0293748488656792 0.0155999344090537 0.0211981408845598 0.00877541590053074 0 0.00883905568907335 0.0170768971534244 0.00066968087960128 0.000256615039237551 6.30650414313604e-05 0.00211777297098529 0.00276691674184041 0.00172851277781044 2.79781159757946e-11 0 2.80361652070415e-11 0.0121815308746614 0 0.00735608898387868 5.03706346001805e-12 4.05425482333956e-08 3.89762171354594e-11 0.0217574979262006 0.0105057316318903 0.0163214057980182 4.73460473920011e-21 2.38067710399281e-21 3.80966839871635e-26 NM_001193233.1 CUL1 Bos taurus cullin 1 (CUL1), mRNA. 0.0 2792 81.43 0.379828609096902 XM_005250060.1 CUL1 PREDICTED: Homo sapiens cullin 1 (CUL1), transcript variant X1, 0.0 2522 79.27 0.379828609096902 TCONS_00181392_2 sp|Q9WTX6|CUL1_MOUSE CUL1_MOUSE Cullin-1; 0.0 1247 78.48 0.998696219035202 2 coding 0 0 0 0 0.898357815508045 0.0192831694868643 -0.866466991910493 0.000916242677190368 CAGCGCAGGCCTCAGCTGATCTCACTTGGCGATCTGGCGTTGTGATGGCCTTGAGAGTTGTCTATATCTGGTGGGAAGGGCTGGGCCTAAGCGTTCTCTCATCAGTCATTCGTCGCACCTGCTCTGAGGGTATATAACACTGAGTGAGAACCACTGTGAGCTGGTGGAATTTTGTTTCTCTACCAGCTTGGAGAGGGAAAAAGGAATCCATTCATCTTCAGGAAAAAAAAGGGACTGATTTTACAAGCACAGCCTAGGTCTGAGTTCTAGCCACCACCCAGTTGTGTGATCTTAGCCAAGTTCCCTTCTAGGTTTGCGCTGTGGTGAGATTTCATTCTCTACATTTAAACAACATCCTTTCTGAGCTGCTGTGAATAAATTTGCAGTGATACTGTATATCTTCATCTAATGGAGAATTAGCTGTACCTTGAATAAAGACTGTGGACAACTTGATAATAGTACAATGTCATCGGACTGGAGCCAGAATCCCAGTGAACTGAATCATCTTGGCATTGACGAGCTCTGGGATAACATCAGAGCGGGAATCCAGCAAGTGTATGCCAGACAAAGTATGGTGAAATCCAGATACATAGAACTCTACACTCTTCTTTATAACCACTGTTTATATGTGTCCCCTCAAGCCCAGACTCAATCAAAAAAGGGGCAGAAGCTGAGGGAAGATAAGACTGTTGGCTTCGAATTATACAAACGAATTAAAGAATTTTTGAAGAATCACTTGACAAATCTTCCTAAGGATGGAGAAGATTTAATGGATATAGGAATACTGAAGTTCTATACTCAACAATGGGAAGATTACCAGTTTTCGAGCAAAGTGCTGAATGGGATTTGTGCCCGCCTCAATAAACATTTACTTAATAGCACAAATAACGAAGGACACAATGTTTGTGAAATATATTCTCTCGCAATGGTGACTTGGAGAGATTGTCTTTTCAGGCCATTGAATAAACAAGTAACAAATGCTGTTTTAAAACTGATTGAAAAGGAAAGAAATGGTGAATCCATCAATACAAGACTGATAAGTGGTGCTATCCAGTCTTACTTGGAACTGGGGGTGAATGAAGATAATCAGTTTGAGGAGAGCCCTATGCTAACAGTGTACAAAGAAGCCTTTGAATCTCAGTTCTTGGCTGACACAGAGAGATATTATACCAGAAAGAGTACTGAATTGTTGCAGCAGAACCCAGTTACTGAATATATGAAAAAGGTGGAGGCTCTTCTGCTGGAGGAGCGGCGGAGGGCCCGGGTCTACCTTCACCAGAGCAGCAAGGGCAAGCTAGCCAGGAAATGCAGGCAGGTGCTCGTGGAGAAACACTTGGAGATTTTCCTCACAGAATTCCAGAATTTACTGAACGCCAACAAAAGTGAAGATTTGGGTCGCATGTATAGGCTCATATATAGAATCAAGAATGGCCTGGGAGAATTTAAAAAGATCCTGGAGACACACATTCATAATCAGGGTCTTTCAGCAATTGAGGAGTGTGGAGAAGCTGCTTTAAATGACCCCAGAATGTATGTAGAGACAGTATTGAATATCCATAAAAAATACAATGCCCTGGTGATATCAGCATTCAGGAACCATGCTGACTTCGTGGCTGCACTGGACAAGGCATGCAGCGGCTTCATAAACAACAATGCAGTTACCAAAATGGCTCAGTCATCCAGTAAATCCCCTGAGTTGCTGGCTCAATACTGTGATTCCTTGTTGAAGAAGAGTTCCAAGAACCCAGAAGAAGCAGAACTAGAAGACACACTTAACCACGTGATGACGGTCTTTAAGTATATGGATGACAAAGATGTGGTTCAGAAGTTCTACACGAAAATGCTGGCCAAAAGGCTTGTCCATCAGAACAGTGCGAGTGACGATGCTGAAGCAAGCATGGTCTCTAAGTTAAAGCAAGCTTGTGGTTTTGAGTATACCTCCAAACTTCAGCGGATGTTTCAAGACATTGGTGTAAGCAAAGCTTTGAATGCGCAGTTCAAAAAGCACCTGATGGATTCAGAGCCTTTGGACTTAGATTTCAGTATTCACGTTCTGAGTTACGGATGGTGGCCCTTTGAGGAATCTTGTACAGTTCTCTTGCCATCAGAGCTGGAACCATGTTATCGGCGCTTCACTGCATTTTATGCCAGCTGTTACAGTGACAGAAAATTGTCATGGGCATATCAACTGTCTGAAGGAGAATTAGTAACAAACTACTTCAAAAACAACTACACTTTGCGTGTATCTACATTTCAGATGGCCATCCTGCTCCAGTACAACACGGAAGATGCTTACACCATTCAACAGCTGATGGACAGCACTCAGATCAAAATGGACATTGTGGCACAAGTCTTACAGATTTTATTGAAGTTTAAGTTACTGGTTTTGGAAGACAAAAGTGCAAATGTTGACGAGGTGGAATTGAAGCCAGACACCTTAATAAAATTACATTTTGGTTATAAAAGTAAGAAATTAAGGGTTAATATCAGCTTGCCAATGAAAATTGAACAGAAGCGGGAACAAGAAACCATGTACAAAAACATTGAGGAAGATCGCAAACTGCTGATCCAGGCGGCTATTGTGAGAATAATGAAAATGAGGAAGGTTGTAAAACACCAGCAGTTACTCGGAGAAGTAGCGACTCAGTTGTCCTCAGTATTCAAGCCTCAGATCTCAGTGATTAAGAAATGTATTGACATTCTGATCGAGAAAGAGTATTTGGAGCGAGTGGGTGATGAAAAGGACACCTACAGTTACCTGGCTTAACCCTCCTGGAAGGGTCTGACTGCGGGCACAGCCCCTCGTCCCCTTAGGAAGGAGGGAGACAAGCTCACAGTGGTGGCAGAGTCACTCCGACCTCCTCCTTGGCCCCAGGTCCAGGTACCCATCGCTGGCTCCGGATGGAGAACTGCTTAGAATTACCACACCTCACATCTGTAAATATGGACGCTGATGCCATTTAACCTAATTGAAGACCAGAGGAGAGGAAACTTGCCACCCTGAGGGCTGCATGCTTTTGCATCCAGATCAACCCATTGGCCACATGAATAATAGCTGCTAGCTGGGCAGCCCCTTGGAGGCTGACAGCACCTTGAGAGCAGGTCTGAATGGACCCACTTGTAATCTGTTATGAAAAACCATTTGTCTATGTGCTTCTTTTTTTTAACTGTGGAAATAAAGAAAATTAAAGGGAAAAAAATGAGTTGATTCTAGAAAGTGTCAAAGAATGTTCAGAAGCATGGAGAATAAATCCAGAAGTTCAAATTTTAATTTCAATAGAATTTCAGAGTAAAGTAATAGAAATCAGAAAAAGTCAATATTTGAAGAAATAATGGGAAATAATTTCTCAGAATTATAGAAATGTGTGATTCCACATGTTACAAAAATCCATTTAATGCAAAGCAATATCAAAACAAATTTAAAAAGCAAGAAACAAATGAAACCACACCTGAACACATGGTAGAGTAGCTTCCACATGTTAAGGATAAAGGGAAACGTTGAAAGTCATCAGAGGGGAAAAGCAGCATAATAACGTGTAAAAATCCATTTTCATGAGCTATTTCATTAGACACACGAGGTTTGTTAGATTCACGACATCAATAGAGCAATACTTCCAAATTACTGAGGGAGAGGTCTATTTCTGCAATTGCTCACTAATGGTTTCAAACCACTTCCAACCAAGGAAAACTTTATAGACAACATTCAAAATGGAAAGAAAAGGCTGAAAATTGCAGTTAAGCGTTAACCAACAGCATCGGAGTGTTCAAAACTGTCACATTCCAAAGAAAGGATTGGTTCCTGAGTGAAGTCTTTAGAATACCCTTTCTGTTAAGAGTGTATGTACATACATGAGGTCTTGGGGCATGCCAGATAGTTCTGCTAATAATGTGACATGGTGGGGTACTCGGACCATAGTTTATCAGTTTGACCTCTGGAGTTGCTGGAAACTAAGTAACCAAGGTCAGCCACTTGGACAATAAACCATGTCTACTTTACTGACTCTTAATAGAAACCTTGACACCAAGACTCCTATGAAATAGGCTGTTTTACAAAAGTTCATACACCTTGACACATAAGTTGCTGGGAAATTAAATGCTATTCAATGACTCTGGGGAAGAGGACAGTTGGAAGCTTGTTCCTAATCTCTGCTTGACCCTCACATTTGCACCTTTTGCCTTGACTGGGTTTAATTTGTATCCTTTGGTGTAGCAAACTGTGGCTGAGTAAAACAGCTTTTCTGAGTTCTCTTGAGTCTTTCTAGAAAAATCATCAAACCTGAGGATGGTCTTGGAGACCTTCAACATAGAACGATTTTCAAGGCAGTAGAGACAAACAGAAAAGAAAATTCTAAAGATGAAGCATAAGTGGGAATTTGATGTGTTTGGAAGTCGTATGACAAATTAGCAGTTGGAATGATTAATTATTATTGGCTCTAGTTCTCCACATGGACAAATATATTTAAATAGAATGCATTTATTTTATTACTTACCTCAAACACAAACACAAATTCCAGATGAAGAATAAATGTAAAAATAGAAACATGACTTTTAACCAAGAAAACAGTCTCTATGATATTGAGCCCTTTAATTAAAATTTTTCCAAGGTAAAATTAGTTAAAAAAAAAAATTGAAAAAATGATGTGGCTATCTCAAAAGTGCTAATAATCATTGACAAAAGACACCACCAACAAAATTAACAGATGGAGAAAAACTGGAAGAAAAAATTATAACTATAAATAAGATATTATAAATACATAAAATATATATTACAAAATAAAGGACCAGTACATAGCATAAAGAACATCTATAAGTCAATAAGAAATATGCAAACAACTAAACAGGATACTGGAAAAGGACAGTTTTTCAAAAAATTAAAACAGTTGACATATTAAAAAGTATCCAAAGACAGTAACAATTAAACGTGATTTGAAAGAATAGGAGTAGATCATTTTTCATTCATCAAATTTACTTTTTCCTAAGTCAAAAATGGTTTAAATGTTTGAGTCTTGGAAAACTCTCTCAGAGTACTGATTTTACACTGGGGCAGACAGTTTTCAGGGCAACTTGAGTGTCTTAAAATACGAAAGGTGCATACTCTATAACTTAGTATTTCTGTTTCTAGGTACCTGCTTTAGGGTGACCTACTCATGCATGTCAAAATAAACGCTTATAGATTGCTCTTTCTTAATATAACTTGTTTACTGGCTTTCAAGAACATCACACTCTATTTTGTTCTCTTTTGTCACTATTCACTCCTGACTCTGCACTATGGTTTTCTCTCTCCTGGCGGTGTAAGGTTAAAGTAGCTCCAGGCTCAGCCCCTGCTGCTATTCTCTTCTCCAGCTGCATTCACCTTAGTTATCTAAGATGGCTCAAAGCTTTAAACAGCATCTATGGGCGGATAACTCCGACATATCTATCTCCAGATCAGATCACTCTCCCAAACTAAACTCATATATCCAGTGTCCTACTCATTCACTACTGTACAGTTAGACAAAAATCTGTGTCTCCTCAAAGTCCCTTGGCCACCTCCTCATTTACAAAGACGCTTTCTTCCCTGAGGATCATGCTGCTGCTGCCTTTGCCATTCCACTTGGCAAGATTTCTCTGCTGGCTGGTGGTCAAGCTGAGGTCCCAGACTGTTAGGCCTCTTATGTCCAACAAACCAATCCACATCCGCTTGCATACTGCAATAAAAAATGGGGGTGTGGGATTTTTCATCCTTATTATTGACCACCAAGGTGCTGACCAGTAACATTCAGTAAAGTAGGGCATTGGTCTTGACTAATGGGAATCGAGAGATGGGAGGAAACTGAGTAGAAAAATTCTGTCTCTTCTCTCTTCTAAACTATTCTGAGGTGTAGTTTCTTGGGGTTACTAAATTCCAACTGGGAGGAGATGAGAGAAATCACTGCCCTTAAAAAGTGAAATGTGCCTGTGAGCAAGTCCAAGCAGACCTGTAGTCAGTCACACATTTGTGGCTCCTTCTCCAGCATCAGCCCACACTCATCACTTCCTCCTCCAAAGTCTTAAACTGAGTCTAGATTTCTTCTTCTCATGCATCCCTATGGTATCTAGCATCTTGGTAACACACATTAAAAAGTCTCTAAAATGTCTTTTTAAAAGAAAGACAATGAGAATGGGAGATAGGATATGTGAAAGAGAAAGAAGGAAAGAAAAGAAGAAAAAAAATTCAGACCAACATATCAACTATTCTCTCTCTATACAGTTGTGAAGAACTACTGTTTTATTCTTTCTCTAAGTAACAAAATCCCAATAATTTATGCAGTTAAGAGAAAAGTCAGTGTTCTTCTGGCAAAGGACCTCAAACCAATATTAAAGTTTAGATTTATCTGAGTAAAAGCAATTAGCTTCTTGGCAAGTATTGAAACAGTAATTGTGCAACTTAAGTATCCTAACCTCTCTTTCCCCCCATTTGGAATTTGCCCAATTTATAACTGACAGGTTGCACTTCATAAATGTTGCTGTCTTTGGGCCACTTCCCTGTACAAAGACTTACATTTGTCCCCAGGAGTTTTTTTGTATCAGGTCTATACTCTTATTCCAGGATTTATGATCTACTCTTTAACCATATCCTAACAATAATCTAACCTTCCTGCCAAAGAATTTTATGTTTTATAATTGCCCTGAACAATATCCACTTTGGTCAGAAAGTCTTAACATTCTTCTTTTTATGTCTATACAGTCAAGGTAATGCTGCTTTCTCTCCATAGATTTTTTTTTCCTTCCCACCTATAATATGTTACCATTATAAGAACTTCCTCTTCTTAGTGACTATAGACCCTTGTAGTTATGGCATTAAAAAAAAAAAAGGAAGAGATAGGTCTGGATTCCAGAATTCAATAATTTAGTTGATCTCATGATAACTGTCACCATCAAGAGATGCTGCAATGCAGGTTGTACTAGGACCCAACTGTACCTCAAACAAACCTTTACAAGGCATATAAGATTACTTTTTTTTGTCATCACAGGTGAGCCCTCTGTAATTGCCTTTATAATGTCTCTTCTACTACAAATGTGTCAGCATTAGTCATTCAAAACATTTCTCCTTTGGCAGTTTTTATGTCAAATGATATTAAGACACTGAGGATTCATTCATAATTAAGATATACCTCATCCCTGCCCTTTCAGAACTTCTATTTCAATGAAGAGAATTAACACATAAATGAGATATTTTTAGTGCCATCAAAAAGACTAAGATGACGTGACAGTAAATTGGACAAAGGAGAGACAATTATAGATTGAGTCACCTATCAGAGAAGATTTGCTGATGTTGTGGAATGTTGAGTTGAAGCCTCATTAGAAGACAGTATTCCAAAAGCCTGGGAAAGAGGATGCCAAGTAGTGGGACTGGCAAGAACAAATCTTGAGTTTGGAACGATGTTGGTGTACCTGGGCAGTGAGAGTGTTCAGTGCGGTTGCAGTATAGTACGGAAGAGAGAAAATGGCACATTAAGAAAAGAGGAAACAAGTACAAAGCATTCAGACCTTGTGGACCAAGATATGGAATTTGCATTTTATTGAAAATAAAATGAGAAGCTGCTAGAGAATTTTGGCAAGGGAT TCONS_00183718 r 5' 43659 TCONS_00183718 r 5' 43659 EMBV3_20671 CCTGGTACCCTCAACTTCAAAGGAAAAAAGGAGTGATTCTAATGAAAGCCCAGATTTTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28520 CCAGAATGCCAGCAATTCTGAAAAGATGTCATCTTAATACAACTCAGCACTCCACAGCAG Gene BVT0102_175947 - 0 NULL GK000023.2:37132446-37262020 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41105 CTCGAACCTTCCTCAACTGGCGGCTGTTTGTGAAAACTGAACTCTAAGCCAACCCTCATC Gene BVT0102_230365 - 1 EMBV3_01562 GK000024.2:61512803-61531357 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139545 1 XLOC_084926 NonCoding TCONS_00139545 XLOC_084926 NonCoding NonCoding - 24:61515255-61515850 - TSS104344 292 1 TCONS_00139545_1 58 2 0.511784511784512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000343811134332829 0.000221653666319149 0.000509420446464915 0 0 0 0 0 0.000240787523632271 0 0 0 0 noncoding 0 0 0 0 0.053219010126334 0.653227139216527 0.0065116043450161 0.918743948348801 ACTTCTTTTCCTGTGTGTTTACTTCTTGCTTGTGACACGTGAGACCCACTGCCGGTTCTTGTCTGTGTCCTGATGCTTGGTCCTTCCGGGATGTATGAGAGGATACGGTGCTTCTCAGCTTTCGCAGCGCTGGGAATCTCCGTGAACACAAAGAATCATCCCTATTTACCTTGGGTGAGACAGACTCAGAGACAATTCCAAGATGAGGGTTGGCTTAGAGTTCAGTTTTCACAAACAGCCGCCAGTTGAGGAAGGTTCGAGAGACGAGGATCACTGGAGGGAGAGGCTGAGG TCONS_00139546 TCONS_00139547 TCONS_00139548 s 5' 15508 TCONS_00139546 TCONS_00139547 TCONS_00139548 s 5' 16102 EMBV3_33280 TTACTCGCCGGGCCTGACACGGACGTCCTCAGCTTTGTGCTAAAGGAGAACGAAACTGGA Gene GeneID:539767|RASSF5:NM_001113760:97_cdna UTR3_Alt 2 NULL GeneID:539767 16 GENE RASSF5 NULL Ras association (RalGDS/AF-6) domain family member 5 EMBV3_01843 AGACCAAGGACGGCGTGGTGGAGATCACTGGCTGCCCCCCGGTGTGGACCCCACCCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04108 AAGCTCCGTAGCCACCGACGAGACCAGAAGTGGCATGATAAGCAGTACAAGAAAGCCCAT Gene GeneID:614219|LOC614219:XM_002691352:181_cdna Constitutive 0 NULL GeneID:614219 11 GENE LOC614219 NULL similar to ribosomal protein S23 EMBV3_38108 AGATACCCGGCAGGAGGTGTCTTGTTGGGGTCCAACTGAAAAGGGTCAGTAATGGTAGGA Gene BVV0102_263429 + 0 NULL GK000020.2:14285013-14421748 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113354 TCONS_00113351 TCONS_00113348 TCONS_00113352 TCONS_00113349 TCONS_00113357 TCONS_00113353 TCONS_00113358 TCONS_00113355 TCONS_00113350 1 XLOC_069014 Coding TCONS_00113352 XLOC_069014 NonCoding Coding - 20:14326387-14339549 - TSS84811 928 2 TCONS_00113352_1 59 0.321120689655172 4 0.929792568953727 0.00120003204228695 9.3265238904357e-07 0.00100077769111818 0.000319694996096795 1.89524084807431e-05 0.000203321111575138 1.97647382976428e-08 1.81359483151554e-06 0.000849673357134272 2.35252234974017e-07 7.56014485844412e-203 3.50302447629372e-07 0.000525102266258411 3.44363660486292e-07 1.82601777261129e-07 0 0 0 0.000621778939904969 5.48493973975834e-21 1.38761077186413e-06 0 5.98781950534066e-22 0 0.000915157678482529 0.00372436906827315 5.27376938769416e-07 0 4.80010797334945e-69 0 XM_005221462.1 ADAMTS6 PREDICTED: Bos taurus ADAM metallopeptidase with thrombospondin type 1 motif, 6 (ADAMTS6), transcript variant X2, mRNA. 1e-88 331 100.00 0.196120689655172 0 noncoding 0 0 1 1 NA NA 0.0277704553143844 0.682105214280526 TGGGATGAGCTTGTGCTCTAGAGCCCGAGCTTCTGGCTGTCCATTCCCTGATATAAGAAAGGTTTCCTTTGCGTCTGCACCGGACTAGTTCTCGCTGGCCTGAGATACCCGGCAGGAGGTGTCTTGTTGGGGTCCAACTGAAAAGGGTCAGTAATGGTAGGAGCAGGCCAGGCAGTGGGCTAAGAGAACTGAGTAGTGGGATCCCATCGTCCTCACAGCAGCTCCGTGGTGGTGTACCATTGTCGCCCTCTTTTGCACGTGAGAAGCCAGCCGTATGGAAGTTAAGTAACTTGCTCCTTGTCACTCAGCGAGTGGAGGTGAAAAACAGTTGTGCAGAAGGCTTTGGTGACAGTACGAATGGGCAGCAAAATGCCAAATGCAAGTGGCCAGAGGAAGAGCAGCAACCTGGACATTCAACTTCTGGAAAAATGAAAATTCACTAGAGTCTCCTCTCATTTCAGAGAGCAGAAGCTGCCTGGTTTCTAAACTTGGAAGTTCTGAGTCTCAAATGCCAGGTATCAGCTTAGGACAGGACTTTGGCTCAAGGACCCTATGAGAACCAGGTGCAGTTTGGGAGCTTTCTGCATCACTCTGAGGCTTGCCTTACCACAGTCCAAGGCCGCCATACCTTGTGTTCAGCAGCTCAGGCCCTCCTCATCTCTCACAGAGACCAATGTAGTGACCTCTTCACTGGTGACTTGACTCCAGAGGCCAGCTCAGTCTACTCTGCATCCTGCTTCCAGGGAGCTGGAAACCGGGCCACAGCACTGAAGGTTGGAGCCCTCCATTTGGGTCTCCATTGCCTACAGAATGAAAAGTTCAATTCTGTTGCAGCATTTTTAGACCTACCTAGTTTTCTAGTAAATCTGCCTCCTTCCTTCCCTCACCTTCCATTTGCTCTTATCCTTCAACTGTGGTTACTGAGAGG TCONS_00113327 TCONS_00113333 TCONS_00113337 TCONS_00113338 TCONS_00113340 TCONS_00113344 TCONS_00113347 TCONS_00113341 s 3' 39306 TCONS_00113327 TCONS_00113333 TCONS_00113337 TCONS_00113338 TCONS_00113340 TCONS_00113344 TCONS_00113347 TCONS_00113341 s 3' 39306 EMBV3_23747 TTGAGCAGAAGGCATAGAGAATCCCCACACATGCACAGTTCCCCCGAACTATCAACATCC Gene GeneID:767944|ATPBD4:NM_001077016:109_cdna UTR3_Alt 2 NULL GeneID:767944 10 GENE ATPBD4 MGC128665 ATP binding domain 4 EMBV3_00363 TACAACCCTGCCATGGATGATTATGCTGTGCCACCCCCTCGGAGCACAAAGCCCTTTCCA Gene GeneID:514962|DOK1:NM_001024543:29_cdna Constitutive 0 NULL GeneID:514962 11 GENE DOK1 NULL docking protein 1 EMBV3_27706 TGAGGTGTCGGCTGGCAGTGAGGTGTCCCCATGTCGCTTCTGTGCATCTTTCCTGGTTTT Gene BVT0102_144753 + 0 NULL GK000025.2:42549276-42573238 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10521 CAATACCCTCCCTGGCGAGGGGTCCTAGGCCCAAACGGCTGTTGGATGAGTTGCAGCTGA Variant GeneID:281465|ROM1:NM_174174:10_cdna 508^667 1 EMBV3_29639 GeneID:281465 29 GENE ROM1 MGC139433 retinal outer segment membrane protein 1 EMBV3_02458 GACGCCACTTTCCGGAGCGCACAGCAAGTGAAATCAGGTATTATGATGAACTGTGCACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12300 AAAGCTGCTCATGAAGAAAGCCAGAGTGCTTCTAAAGAACAAAGCTCCAGGCACAGGGGC Gene GeneID:519225|CNGB3:XM_002692827:174_cdna Constitutive 0 NULL GeneID:519225 14 GENE CNGB3 NULL cyclic nucleotide gated channel beta 3 EMBV3_03933 TTGTGGGTAAGCTTCCTGATGGGAGGAACTGGCAGTGGGGAAAACTGGGTCTTGCTCTGG Gene BVT0102_299887 - 1 EMBV3_41181 GK000030.2:81298337-81474016 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08929 CTGCTGCCTGATGGCAAGCGGTCAAGAGCTGTAGGTTTAGGTGCCTTGTACAGTTTTTAC Gene GeneID:511612|SEPT2:NM_001046092:23_cdna Constitutive 1 NULL GeneID:511612 3 GENE SEPT2 MGC133898 septin 2 EMBV3_08750 CCGAAGGGCCAAATGGAGAAGATACCAGAGGGCATTGATGTTTAGAAATGTGCACCCTGC Gene GeneID:616174|ESX1:NM_001079624:37_cdna Constitutive 0 NULL GeneID:616174 X GENE ESX1 NULL ESX homeobox 1 EMBV3_11198 AGTTTATACTGAAGGGGAGATGAAACAGGATTTGCTGACCTCGAGAGCTGCCCCTTGGAC Gene BVT0102_104340 + 0 NULL GK000025.2:15992973-16018199 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00148310 1 XLOC_090192 NonCoding TCONS_00148310 XLOC_090192 NonCoding NonCoding - 25:15996010-15998603 - TSS110845 2593 1 TCONS_00148310_9 169 0.08368684920941 1 0 0 0.000182135174439991 0 2.88227304939146e-05 0.000820642038424894 0 0 0 9.12857153460922e-06 0 0 1.1031825447044e-05 0 1.99552739403993e-05 0 0.000325942977465886 0 0.00334803452540267 0 0 0 0 0.000283041354552906 0.000310335214844403 0 0 0 3.70427065949652e-06 3.74439301888589e-05 0 XM_002703081.2 XYLT1 PREDICTED: Bos taurus xylosyltransferase I (XYLT1), partial mRNA. 0.0 4677 100.00 0.999614346317007 XM_005255474.1 XYLT1 PREDICTED: Homo sapiens xylosyltransferase I (XYLT1), transcript 0.0 1159 73.15 0.774778249132279 0 noncoding 0 0 0 0 -0.0319952689441495 0.766682216972638 0.0471484982225504 0.349531916197875 GTGGGTTTGGGGGAGAAGGATGCATCCAATAAGCTGTGATACTTTGTCCAGTTGCCTACTCACCCCTGTATTGGTCAGGCAGAAGCCACACCCAGGAGGCAGACAACTCTGAGCCCTGCTTCCCAGGCCCAGCGCAAAACAGTCTATCTCCAAGGAAGGCAGAGCGGTTGCTAGGATCCTCATATTCTAAGAAGTGTGTGTGCTCCTCCCTTTGGAAAAAGGCCCTTCTGATCTGACCAGGAGTCACTCTGCCTTCATTTGCCATTGTTGAACTTTCAAAATGCCAGTGGAGCTGAGGTTTCAGTCAATTCCCCGAAAAAAGGAAATGACAGCTGCTTTGGGCACAGGCCAGGATTGGGGGGGACTGTGCTTCCTTCTGGTTCTCCAGTTTGCAGGTGCAAGGAGAACCCTGGCTGGAACCTTGATCTCTTTGCCAAGAGAGTCCCGAAGAGAGGAGAGCGGTAGCAGCTGGGTGTGGGGGCCTGAGCAAAGACCCCTTTCATAGTCCAGTTCACTGGGGTTACAGGACCCAAGCTCCCTCCGCAGCACCCAAGGGGGATATACTAGAAACAGCTGTTGGCAAAGGCCTGCCAGGTCAAAGCCACACCCTCTGGCAGGGGTCGCCTGCGGCTATGCAGTCCAGGACACTAGCACAGACGAATGAAGCGGCTGGTGTCAGACAAGAGGGAATGGCGGGGACTGTGGTCAGCAAGTGGGTGCCTGACACAGACAAAAAATACAGCTGCGTCTCAGCCCCAGTCTGAAGTTGCGAGTGAGAATACAGGCACGGTGCAGCAAAATCATCTAATTTGGTAAGAGAAGCCAAAAATCCATATTTTTATAGGAAATCTGATTTTCAAACATTGGCAAGTTTTGTTTTTACCAGAGTATAGGGAAAGGGTTCAGTCCAAGTTCAGCCTGTGTGCTGCCCGCTCTATGGAGAGGTGTTTAAAAGGAGGTTAGGTGGTGTCCTGGTGGAAGGGGAAAAGCCAGCATTGGGAAGGGGCAAAATTAACAGCATATGTGGAACTCTGAAGGGAACGAGGGCCTCTTACTAGTCATTCCCATCCCGAAGAAATGGTCCCTCAGAGAAGTGTCCCATGAGAACTGGCTTGTTCAGCTCTCCTGATCTCAAGACAGTTTATACTGAAGGGGAGATGAAACAGGATTTGCTGACCTCGAGAGCTGCCCCTTGGACATCAAGGAGGTCCACACTGGCCCAGTCCCCACCTTCCAGAATTCCATCACACCAAGTGGAGATGTCCAGGAGATTGTTCATGGGGAGAAGTTGGCGTGTCAAATAACCCGCCGGCTTGCTCCAGATCCTGGGTTGTAGCGGCCACCTTGCCATGTGTCCAGAAGCATCTTTGGGAGCCGTGCTCACGGGAGGTCCTCTCTGCTTTTCGCCTCACCTACCTTACTTTGCCCATGGATCAACCACAGGCGCTACCTCATGTGTCTGCTGAGAAGTTTACCTTGGGGGAGGAGGGAGAGGAATAAAGGTGTCCAAAATCTGCTGGAGCTTGAATGTATAATCTATGCAAATTCTCTCTCTGCGTCTCTCCCTCTCTCTGTCTGTGTCTCTCTCTCAGAAGAAGTAGTATTTTTTTTAATCTGGCAAACAAGATACTGTACAGACCCCTCTTAAGACTGAGGAGGGCTTCCGCGTGCCACCTGTGTCTACCCCTCACGTTGTCGTTGGTTCTGTCCTTGCCAAGCCCCAGGCAGGGAGATGGAAGCCCTCTCTCTTCCCCTTCCCTTGGCTGGGAATACTCCATCCACCTCTGCCTACAGGCCCCACGGGAAAGCAGGTTCTGCGTCTTGCCACCTCCGTTCCTAACTCCATCCTCTCCATTCCTCATTTGCTCCCTTCTCTCCTTTCTCCACGCCACCTCCCCGCCCTCAAAAGCCTTAGGTTTCTCCGTTTTTAAATGTGGCCTTAAAATTATTTTTGGAAAGCTGACCACCCTGTCTCTCCCATTTCTACCAACATCCAAGAGAAAAGAGCATCTTGAAGCTTTCGGAGCAACCTCCTAAGCCAGGGGCTGCCAATCTGTAGCTTGCAGATGTGGTAGAAATGGCTTCTATGTGTCGTCTTGAAGAAAAATATCCTTCTATTTTTCCTATGGGTAAAATGAAGGCTTGGGTGCTCGTCTAAACCTCAGCCGACTCCCGAAGCACTCTCTTGAAGCATAACGCCGCTGTCAATAGGCTGGTTTAATTACCGGCAGGATGCCAACATGGGCTTACCAATCCTCCCCCTCCCCCGAAGACTTGGTGACTTTATGTACTTCATTCAAGGGTAAATCAGCAGAGGTTCTCAATTTATCTCTTCGTCCTTCCTGCCTGGAAAGTGATAGAATTTAATATTCCCAGTGGATGGTCATGTTCTCAAAGGGATCACACTCTCCCTACTTTCAGAGTCCCTCCTTTTTCCCTGCCGTTGCTCCAGGGCTGATGGAGGCCAAAGACAACCCCAGGGTTTTCATAGGAAATTCACTGGAATTGAGCTCAATCGTCTTTGTCGTCCTTTGTCTCTTTTTTTGGTATTACTATATTGTCAATAGCATTTGGGTATTTTTTTAGAGGCCTC TCONS_00144625 . 3' 3039 TCONS_00144625 . 3' 5631 EMBV3_14619 GGTAACCATGGAGATAACATACCAGTGATGGAGCAGGCCCCCCAGAAGGATAAACACCAG Gene BVV0102_206632 + 0 NULL GK000008.2:77609181-77753996 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225957 TCONS_00225958 TCONS_00225956 TCONS_00225955 TCONS_00225954 TCONS_00225959 1 XLOC_137888 Coding TCONS_00225955 XLOC_137888 NonCoding Coding FRMD3 8:77722677-77804377 x TSS169051 4294 3 TCONS_00225955_7 130 0.620400558919422 3 0.947477937306454 0.000157204195022591 0.000255348405135653 4.93744056021873e-05 5.05944787414196e-06 5.89395951137363e-46 2.00196240391799e-27 5.27962963341478e-62 1.17435611001697e-05 5.69966919343291e-05 7.47239437156298e-06 6.39736863795354e-07 0 1.59011910189151e-27 1.14425449589475e-62 0 0.00031212699570724 7.34613036313495e-05 0.000105178675096499 0.000109393957098691 0.000478098116264018 8.70134135726017e-05 3.31228625876469e-05 0 6.24672446614725e-05 0.000107981779989182 0.000424716338003946 8.92996978717527e-05 1.34212578766839e-05 1.49433785290535e-06 0 NM_174233.2 AGTR1 Bos taurus angiotensin II receptor, type 1 (AGTR1), mRNA. 3e-135 488 91.81 0.0794131346064276 NM_007220.3 CA5B Homo sapiens carbonic anhydrase VB, mitochondrial (CA5B), mRNA. 3e-53 215 70.82 0.111551001397299 0 noncoding 1 1 1 1 -0.370585594149899 0.287494154764875 0.0357450847671746 0.540477354066923 CTCTTGAGAGTCCCTTGGACTATAAGGAGATCCAACCAGTCCACACTAAAGGAGATCAGTCCTGGGTGTTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTCATGTGAAGGGTTTACTCATTGGAAAAGACCGTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACAACAGAGGATGAGATGGCTGGGTGGCATCACCAACTCGATGGACATGAGTTTGGGTAAACTTCGGGAGTTGGTGATGGACAGGGAGGCCTGGCATGCTGCGATTCCTGGGGTTGCAAATAGTCGGACACGACTGAGCAACTGAACTGGACTGAACCGAACTGAAGTCTTACACAGCTCTACAGTACAGTTTGGTCAGCTCTTAGACTGAAGAAAATTCTCTAGCACTGCTTCTTTAATGGGGCTCCCCAGGTGGTGCTGTTGTAGCCAAACCCCCTGGGAAACAAACTCACTCAGAAGGACCGTGCAGATAATGGAGTGCAGTTTATTACACTGGTGGGTCCAAGGCAGAGTTTCCTCCTTAGCCAGGCACCCTGACTGTTTTTTGTGTCTGCCTGTTATACCTAGTGTGTGCGTGCCCAAGCCCACATTCCCAATTTTCTCAAGTCTGCTCTGGAAAATGTTAGAAGGAGATACAATTAAGTTAGTCATGTTTCACATTCTGAAGGTCAACTAGCTATGCAGTGCAGCCCACATTACTATGCACCATTAAGATTACAGAAGGTATTCGATAACACAATGAGTTATCATATTCTTCTTCTCCAGGGAGTCTAGGTATGAGGTCAGCCTAGTCTGGTGTTTATCCTTCTGGGGGGCCTGCTCCATCACTGGTATGTTATCTCCATGGTTACCAGATATGTAGGCCAGAGTTCATTAAAAGTGCAAGATGGAGTTAGTTCAGTCTGGGTGATCTGCTTCTTCCCTTCTTCAGCACTAGTAGTAAAGAACTCCCCTGCCAATGCAGGAGGCGTTAAGAGACGCAGGTTCGATCTCTGGATTGGGAAGATCCCTGAAGGAGAGCATGGGAACCCCCTCCAGTATTCTTGCCTGGAGAATCCTATGGACAGTGGAACCTGGCGGGGCTACAGTCCATAGGGTTGCGAAGAGTTGGATAAGACTGAAGCAACTTAGCACGCATACTCACTTCTTTAATGAAGAATGGATAGTTCCCTACACAGAGACTGCAAGATGGTCTTCTGTGGTGTCTGGCCCTGAAAACTCTGAACAAAAGGGATCCACTCCATCTCTGAAAGTAGTTAATTTTTCAGAAGATTGCCGAATGCTTACACTTAGCTATTGAAAATGTTACTATGTGACAAAACAAGAGTGGTCTAACCTTGTCCTCACATCTCCATGTTTATGAGATGACCGTGTCCTCCATTTCCCAGTGTCCTCCACAGCTGGCCATCCGAAAGTCATTTATTCCACATACCAACAGGATTTCAGAGGTGCCTAGATTTTCACTTAGCCTCCAGCCGTCTTGAACTGCCAAACGCCCCGAGGAAGCACCATGACTCAGCAGTCCTCATGGATGACCAAAAAGAAAAGCTGACCGGACCTGGGGTGTTGGACCATGCTCCTTATAGCACCTTTTGAAAGTATACCCAGGTCCTTCCAGAAGATGTGGCCTTCTCCTAATGGAAGTTGATTAGAGTAAGCCAGGGCTTCTTGATTAGAATAACGAGGAACTTCTGAGGGCCTAGCTCAGCCCACATGCTTCTGAGAATACAGTCTGCATTCCCTGCCGAAGCCCTTAAGAACCTGACCTCCTCCATCGGGTTCAGCAGAGGCAGCAGTCCTTGGCAAGAAGGGCAGGATTGGAGAGTAAAGAAGAAACAGGAGGCCCACGGTCTGGGAATCACCTCGGTGTTTCCCGAGGTTGCTAGACAAAACCACACACCTGAGTGTTCTGGTGCATGTACCACGGGAGGGCTGTGCAAAGAAAGGCACAGGGAATTATCCAATGGAATCTTCTGGGTCATTCCTGTCCTGGGCAGTTCCTATACCTGCTGTCAGCTATCCTTCCCTTCTTCAGGCGAGCTGGACAACTTAAGTGATGGGAGAAGGAGTGGTAACAACAATGGACTTGGAAATTGCCAGAAGTAGAAAAAACCACTCTGCCAGGCTCCTGTGTTCATGGGATTCTCCAGGCAAGAATACTGGAGTGGATTGCCATTCTCTTCCCCAGGGGATCTTCCCGACCTAGGGATTTAACCTGGGTTTCCTGCATTGCAGGCAGATTCTTAACCATCTGAGCCACCAAGGAAGCCCCTATATGGAACCACAGAAGACTCTAAATATATACCAAAGCAATCCTGAGAAAGGAGAACAAAGCAGAAGCAACACACTTTATGATTTCAAGCTGTTCTATATATAAAACTACAATAATCAAAATGGTATAGTACTGGTATAAAGACAGACAAATCAGTGGGACAGAATCTTGAGCCCAGAAATACACCCAAGCATATTACTCAAATAATATTTGACATGGGAGGCAAGAATATTCAGTGAAGAAAAGACTTTTCAATAATGGTGCTGGGAAAATTGGCTATTCACATGTGAAAGAATGGAACTACACCCAGAGCTTCCACTACTCACAAAAATTAACTTGCATTGGATTAACAACTTAAATGTAAAACCTGAAGCCGTGAAACTCCAGAAGAAAACGTGGTGGTGATGGGGGGAGGGTAAAGCTCCTTGACATAAGTCTTGGCAATGATTTTCTATATATGACACCTAAAGCACAAGCAACCGAATCAAAAACAAGTGGGACTACACCAAACTAAAAAGCTCCTGGAAACAAGAAGCAAACAACGATGTGAAAAACAACCTATGGAATGGGAAGAAAAATATTTCCAACCTATATCTGATTTAGGAGTTAATATCCAAAATATACGAAGAACTCATACAACTCAATAGTAAAAGAACAAATAATTTGATTTGAAAATGGGCAAAAGGTCTCAAAAGACTTTTTTTTTTTTCCTAAAGGGGATACACGAAAGACCAACAGTTACATGAAACTATGTTCAGCATCATCAATAATTAGGGAAATGCAAATCAAAACCACAATGATATATTATGTCATGCCTTTTAGAATGGTCATCATCAAAATGACAAGTAGTAACATGCTAGTGCGGATGCAGAGAAAAGGAAACCTTGGTGCACTGTTGGTGGGATTGTAGACTGGTTCAGGCACTATAGAAAATAATACAGAGATTCCTCAAAAAGTTAAAAACTGAACTACCATACAATCTAACAATTCCACTTCTGAGAATATATCAGAAAGAAACAAAAACACTGACTTGAAAAGACATCTGCACCCCTGTGTTTGAAGCAGGATAATTTACAATAGTCAAGACATGGAAACCACCTAAGTGTCCATTTATCTGTGAATACGTATACAAAAAGCAGTTACACACACACACTCAAACACTAGAATATGATTCAGCCACCAAAAAAATGAGACAATCTTACCATTTGTGACAACATGGATGAATCTGGAATGCATTATGCTAAATGATATAAGTTCAGGTAGAGGAAAACAAACACTATATGATCTCATGTATATAAAGAATCTAATTAAAAAAAAACTCATTGAAAAAGGAATCAGATTTGTGACTATCAGAGGCAGGGAGTAATGAGGGAGAAGCAGAGGAAGAGTTAACAGATACAAATTTCTGGTTATAAGTAAGTACTAGGAATATAATGTACAACATGGTAACTATAGTTAATACTGCTATATGATATATATGAAAGTTGTTAGAGTAGGTCCTAAGATCCCTATCACAAGGAAAAAATTTTTTCTTTTTGTTGTATCTATATGAGATGATGGATGCTAACTAAAGGTAGTGCAGTAATCATTTCACAACATTTGTAAGTCAAGCCATTATGCTGTATCAGTCAGTCAGTTCAGTCGCTCAGTCGTGTCCAACTCCTTGTGACCCCGTGGACTGCAGCATGCCAGGCCTCCCTGTCCATTACCAACTCCTGGAGTTTACTCAAATTCATATGCTGTATACCCTAAGCTTATATAATGATGTATGTCAATTATATCTCAATAAAACTGGGGGAAGATGATGTGCAGGACTGAATTAATGGTTTTATCTTTGAAATATCAGGAGCTATTTCCTGATAGCTCTGATATGACAGTACTGAACATCTTAGACGAAAGATACCATAAAACATGCAAGCAAAATAAAAAGGCCGACAAGCACATGAAAATATGTTCAATGTCATTAATCGTTACCACAATAAGATAGCACTTC TCONS_00228273 TCONS_00228274 TCONS_00228275 TCONS_00228276 TCONS_00228277 TCONS_00228278 TCONS_00228279 TCONS_00228280 TCONS_00228281 r 3' 5525 TCONS_00228271 r 5' 5926 EMBV3_12500 AGAGTCGGACAGGACTGAAGTGACTGAGTATTAACTATGCATTAGACTCCTCCACATTCC Gene BVV0102_364054 + 0 NULL GK000007.2:14432005-14527359 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36594 GAGTTAGAGGAAATTTAGGCACAGTGCATGCATCACTGATTACTGTTTCATCAAGTCCTC Gene GeneID:534329|ARL15:NM_001014943:76_cdna Constitutive 0 NULL GeneID:534329 20 GENE ARL15 ARFRP2 ADP-ribosylation factor-like 15 EMBV3_37288 CACAAGCAGTGGTGGCGACTCTTCACCAAGGGGTGAAGCATCACCTCCTTCCAGCCCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20795 AAAGTGTCATGCTTCCAGTCTACTGTAAAGGGATCACTGCTTTGATTGAAATACCTAAGA Variant GeneID:514919|WDR41:NM_001075690:6_cdna 522^633 2 EMBV3_15847 GeneID:514919 10 GENE WDR41 MGC142930 WD repeat domain 41 EMBV3_33471 GTACATAAACCGTATCCATGCCCTACTCAATCATTTCTTTCCTACCAACTACCTCCCACC Gene BVT0102_255771 + 0 NULL GK000006.2:60666318-60754798 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33536 CTCAAAGGAGGGGTTGGGGGTGCAGGAGCAGCCCCTCGAAAGCGGGGTGTCTTCTCTTTT Gene GeneID:525278|APBB3:NM_001075867:250_cdna Constitutive 0 NULL GeneID:525278 7 GENE APBB3 MGC142933 amyloid beta (A4) precursor protein-binding, family B, member 3 EMBV3_17389 ATGAAAGCACACTCAAGAGCCACAAGCGCATCCACACGGGCGAGAAACCCTACGAGTGCA Gene GeneID:534401|ZBTB16:NM_001037476:101_cdna Constitutive 0 NULL GeneID:534401 15 GENE ZBTB16 MGC127918 zinc finger and BTB domain containing 16 EMBV3_10019 GGTGTGCGAACTGCTGCGTTGCTCTAACACTGTCCCCTCTGATCTCCGTTTGCATGATAT Gene BVV0102_184138 + 0 NULL GK000019.2:63467783-63621225 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101415 1 XLOC_061656 NonCoding TCONS_00101415 XLOC_061656 NonCoding NonCoding - 19:63587144-63587604 - TSS75791 460 1 TCONS_00101415_1 88 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000114833270364706 0 0 4.67668972057646e-05 0 0 0.000322637351925026 0 0 0 0 0 0 0 0.000954117352092226 NM_002737.2 PRKCA Homo sapiens protein kinase C, alpha (PRKCA), mRNA. 5e-58 228 71.43 0.98695652173913 0 noncoding GGGGACTATTCAAAATCATCCATGAAGGCTGTGATTCTTCTGAGTCTAAAAATTCACCTCGTATCTCCTCTATTAGAGTCTTTCAGAATATCTTTTATAGATGATCAGAAACGTTTCAAATCATTGCTTTTGCTCTCTTGTGGGGGGAGGGTTGAAGGACACACCAGGTTTAAATCGTTAATTGAAAACCATCCTGTGTCAATCAGACCCCACATCTGTGTGGAGGAGGCAGGGTTGGCGGGTGCAGTTTCCCTTCTGTGTGAGCACCTACCTACTGATGACGGGTGAAGGCTGTTCAGCTGTCCGGTCACGTTTGGTTTATCGTGGCCGAGACGGGTGTGCAAACTGCTGCGTTGCTCTAACACTGTCCCCTCTGATCTCCGTTTGCATGATATGCTCTGTTAGATACATTAACTGTAGTTTGGAAGCCCATGTGTTCGAATAAAGACAATGACCATCC TCONS_00094921 TCONS_00094923 TCONS_00094924 TCONS_00094925 . 3' 4034 TCONS_00094921 TCONS_00094923 TCONS_00094924 TCONS_00094925 . 3' 4493 EMBV3_10686 TCCCTGTCAAAGAGGAGCCAGGATGAAGGTGGATTGCAATGGCTTCTAGAGAGCAGAGAA Gene BVT0101_039148 + 1 EMBV3_16689 GK000002.2:92720808-92995055 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00110850 1 XLOC_066752 NonCoding TCONS_00110850 XLOC_066752 NonCoding NonCoding - 2:92751370-92753349 - TSS82471 1979 2 TCONS_00110850_1 57 0.0197069226882264 1 0 2.06250937342094e-05 2.15795112887376e-05 1.87043926729346e-05 8.39227322653557e-06 8.73174581373256e-06 1.80750757431328e-06 2.45566671849445e-07 4.98122821281743e-07 0.000159477219883322 3.95024397299513e-05 0 0 0 2.13925758747186e-05 9.17281091867153e-05 0 0.000142616845978104 0 1.08705339706953e-05 3.63388303251155e-06 0 0 0 0 3.15089734887436e-05 0 0.00011842652050049 9.70709702082646e-06 0 0 XM_005205577.1 COA1 PREDICTED: Bos taurus cytochrome C oxidase assembly factor 1 homolog (S. cerevisiae) (COA1), transcript variant X3, mRNA. 1e-09 69.8 95.35 0.0212228398180899 0 noncoding 0 0 0 0 0.0404354286961146 0.845837641019206 0.0029552017036681 0.955297470536832 ATCAGGGGACTTCAAACATTGCCTTTGAAGTGGGCCCCCAGTTGGGAAGACCCCACTGTTCAGGCTACTTTATAGTGGTAATATACTGCCTGGAAAAAACAGATGCCAAGAAAATGCACAGATTGAATCTCGGAGCATCTGAAAACCTAAAACTTCAGGGGGCCAAGGAAGGTCCTAGTCTTTTGATTTTTTTTTTTTTTTAAAAAGGCCCAAAGTATTAAATTGAAACAGGCACTTCATTTCTTTCCTTCATTTCTCCCTTCACCTCAGGAGACCTATGTTAAATTCCACTTAGATCACAGCTAGACGTGGGTTTGATGGTCTCAAGCCACCTTTTAACTGTACGTTCATCCCATAAATAGAAGATGAATAAAGACGTCAAACTTCATCCATATAGCATTCTGACATACGTGGCTCCCTGTCAAAGAGGAGCCAGGATGAAGGTGGATTGCAATGGCTTCTAGAGAGCAGAGAACTTCAGCATAACGTGGTGAATTTACACATGTAAACAAGAATGTGTGGGCTAGGAGCCCATAGCAGGTGGGGCTGCAGCTGCCAACACTGTCCTAAACGGACATTTGTGGAAGGACAGAGATTGTGCTGATACAGTATGTGTTCGGTGTGGGCCACTCTCCCAAAGCTATCCTTGTCAAACTTTGTGCTTAAATGGCTCTCTTCCGGGCAAGCAAACTAAAACCTATGCTCAAAGCAAGGTGTCCTGAGACCAGATTCAGTTCTTTATCGTCTCAGTAAAAAAAAAAAAAAAAAGATTGTGATATGGGGATTATACTACTAAGATTTATTCATCTCTCTGTGTCCTAAATAGGCAAGGAACCAAATCTAACAACCGGAAAGCAAGGAATACACTGCCAAATATTGATAATTCCTTCCCTGGAATACTCAGGGCTATTTTTAGTTTCTTAATGTAAAAAGCCAGTGAGATGAAAAGTGAAGTGATCCGTTTCCAGAAGAAAAACCGTCGAATCTTCATTAATAATTCCTTGTAGAACGCTCCATGGGCCTTTATCTGACAGCCTGACAAGCTGAACTAAACAACAGAGACTGTAGGAATGTAAAAGACATAATCTTAACACCAAACCTTCTGAAGATGTGGCTGTCATTTTACATTAAAGGCGAGGAGTAAAAAACCTCCATTGAAACAGAAAGAGCTTGCAGCATGATTACAGTGCCAGAATTTAGTGGGGGAAGAAAAGACAGGCATCAGAGTTAGCAAAGGGAGGTATGAAGGGTGCTGAATAACAAGCTTCCTTTCCATGTTTGGTTTGGGAGTTTTGAGAGCAAAAGATGAGGCAGGTAATGATGAGATGCTGTTTAACTGCTCCTAGGCCTAGTGGCAAATCTTCTTTATCAATAAAGACTAACAAGGATTGGGCTAACCATTGTATAAAAACTAACACAAATCTAGATTCTTCTTATGTTTCTATAGCAATGTACACTTTCCAATGTCTCTTCATATGAAAGAGTCTCACTGGACTGTCATAACACCATGGGGTAGTCAGGATAAACATTGCTGTCCTATTGTACACCCGAGAAACCCATCATTCAGAAATATTAAGGGACTTGTCCAGGGTTAAGTATTGGGGTTGAGACCAGATCCAGCTTTCCTTGCCTTTATGCCTGTGCTCACAGTACATTTTAAATATAAGAAGTAAGTGCACACAGCAAACCTTGGGTGATCTGCACAAATTACCGACTGAACAATAACAGCTACTGTCCATCAGAAGCCCAAGGTCTGCAGGAAAGAACTGAAATCGGTGAGAACAGAATAATGTCAGAGAGCAAGGGGTTATGGGAACATACAGATGTTGTTGCCTTTCTGCACTGAGGGTCTTATTGCCTATGAATCGAGCAAAATCAAAGTGAGAAATTGTGTTATTGTGGTATAGTTTCTTTCCCCCAATCATGTTATAATTAGTATTCAGTTCAGTTCAGTCGCTCAGCCGTGTCCGAATCTTTGC TCONS_00103014 TCONS_00103015 TCONS_00103016 TCONS_00103017 TCONS_00103018 TCONS_00103019 TCONS_00103020 TCONS_00103022 . 3' 161380 TCONS_00103014 TCONS_00103015 TCONS_00103016 TCONS_00103017 TCONS_00103018 TCONS_00103019 TCONS_00103020 TCONS_00103022 . 3' 163358 EMBV3_41774 CTGAGCATTTTTGATGCTAAATCCATTGGGTGAAAGTTTATAGGAAGACAGGATTTGCAC Gene BVT0102_112062 + 1 EMBV3_08759 GK000005.2:93898655-93926898 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27430 AACATTTGTAATAATGAAGGTCTTACTGCAACAGTGCAATGCTTGCTGGACAGTGGTGCT Variant GeneID:527565|HACE1:XM_002690144:19_cdna 567^698 2 EMBV3_27338 GeneID:527565 9 GENE HACE1 NULL HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 EMBV3_09105 GTTGCACCTGGGGCCCCGAACCGAAGCCAGAACCTGCTCTGTCGACATCCACTTTCTCTT Variant GeneID:511690|ST6GALNAC2:NM_001075533:380_cdna 170^233 3 EMBV3_42053 GeneID:511690 19 GENE ST6GALNAC2 MGC139669 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 EMBV3_35739 GATATCATGAACAGGCAGCAGGGAGAGAGAAACCAGGAGCAAGGAGCAAAGGTACGGCTT Gene GeneID:281191|GHRH:NM_178325:712_cdna Constitutive 0 NULL GeneID:281191 13 GENE GHRH NULL growth hormone releasing hormone EMBV3_00296 AGCCAAGCACCTGCTGCAGGTGAGGGGCGTGGAGGCCTGCCCGCGCCCCCCCAGCGGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43646 TAGATTCAGCCATGTGGGACTGCTAACATTCAGTCTTTTTTATAAGTGATAAAGTGGCAG Gene BVT0102_432075 + 1 EMBV3_06923 GK000012.2:73978958-74020717 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040917 1 XLOC_024730 NonCoding TCONS_00040917 XLOC_024730 NonCoding NonCoding - 12:72936540-72936898 - TSS30418 358 0.363128491620112 1 0 0 0 0 0 3.44774637289171e-05 0 8.14484036289022e-06 0 1.46929942816166e-05 0 0 0 0 0 0 0 0.00136806563745994 0 9.68142020710708e-05 0 0 0 0 0.000398042828465021 2.58044257792828e-05 0 0 2.6830098546483e-05 0 0 XM_002705410.2 LOC530437 PREDICTED: Bos taurus aTP-binding cassette, sub-family C (CFTR/MRP), member 4-like (LOC530437), mRNA. 2e-87 325 84.39 0.860335195530726 0 noncoding TCCAGTATTGGGGAGGATTTTTATTGAAAATTACTGGTTACACATGTATTTATAACAGTTTAAAGCCCCCCAATAAAACACAAAATGGTAGAAACAAGAACCTTTTGTGTGAATGTGGTTACCTATGGTTTAAAATTCACAATCTAATGTTGTCTGACCAAATGAAATTAAGTTATATGTTAATAACAAAAGAAAACTATATGTTGAACCATATGAAACTGCCACTTTATCACTTATAAAAAAGACTGAATGTTAGCAGTTCCACATGGCTGAATCTAATTAAAAATATCCATTCGAATTTGAAATTTATTGTTACCATCTTTCTAAATTCCATATATATGCATTAGTATACTGTATT TCONS_00035575 . 3' 35100 TCONS_00035575 . 3' 35457 EMBV3_39142 GGGAGCCGGGCAGCCCGCGGCTCACCGAGGTGTCCCCGGAGCTGAAGGATCGCAAAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05717 CAAGCGCCTCTCGGCCCTCAAGGTTGGGGAAGCAAACTAGAATCCATGGCAATAATGGGA Gene GeneID:783487|ENHO:NM_001163653:82_cdna Constitutive 0 NULL GeneID:783487 8 GENE ENHO C8H9orf165 C9orf165 MGC151683 energy homeostasis associated EMBV3_26701 TCACGGGCTCGGGTCTCAAGAGGAAGTTTGATGATGTGGATGTGGGCTCATCAGTTTCCA Gene GeneID:516929|CSRNP2:XM_002687295:206_cdna Constitutive 0 NULL GeneID:516929 5 GENE CSRNP2 NULL cysteine-serine-rich nuclear protein 2 EMBV3_17866 CTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTGTCCTGTTTGG Gene BVV0102_224194 - 1 EMBV3_41045 GK000030.2:103538945-103838486 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00066191 TCONS_00022579 TCONS_00207277 TCONS_00156637 TCONS_00214738 TCONS_00249013 TCONS_00198570 TCONS_00115729 TCONS_00137809 TCONS_00220662 TCONS_00187806 TCONS_00252354 TCONS_00091329 TCONS_00006357 TCONS_00189889 TCONS_00210523 TCONS_00244654 TCONS_00239690 TCONS_00187583 TCONS_00091802 TCONS_00249282 TCONS_00189806 TCONS_00231021 TCONS_00152647 TCONS_00056970 TCONS_00230725 TCONS_00148670 TCONS_00062742 TCONS_00117462 TCONS_00248778 TCONS_00250939 TCONS_00175821 TCONS_00245928 TCONS_00141532 TCONS_00249881 TCONS_00122032 TCONS_00020011 TCONS_00064058 TCONS_00238893 TCONS_00251214 TCONS_00244651 TCONS_00008117 TCONS_00233559 TCONS_00040697 TCONS_00240534 TCONS_00238308 TCONS_00207366 TCONS_00152860 TCONS_00160965 TCONS_00022065 TCONS_00032588 TCONS_00178020 TCONS_00251916 TCONS_00020016 TCONS_00210648 TCONS_00232347 TCONS_00108588 TCONS_00251452 TCONS_00210178 TCONS_00017462 TCONS_00244653 TCONS_00253720 TCONS_00156686 TCONS_00207754 TCONS_00020171 TCONS_00135548 TCONS_00032671 TCONS_00056147 TCONS_00222057 TCONS_00021194 TCONS_00238446 TCONS_00019991 TCONS_00175849 TCONS_00019197 TCONS_00224114 TCONS_00036946 TCONS_00008834 TCONS_00037883 TCONS_00020022 TCONS_00198661 81 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_040908 XLOC_013249 XLOC_125795 XLOC_095097 XLOC_130757 XLOC_151956 XLOC_120224 XLOC_069898 XLOC_084019 XLOC_133979 XLOC_113849 XLOC_155295 XLOC_056104 XLOC_001920 XLOC_115926 XLOC_129033 XLOC_150512 XLOC_146355 XLOC_113628 XLOC_056573 XLOC_152225 XLOC_115843 XLOC_140510 XLOC_092412 XLOC_034773 XLOC_140215 XLOC_090550 XLOC_037469 XLOC_071628 XLOC_151721 XLOC_153882 XLOC_105600 XLOC_150855 XLOC_085960 XLOC_152824 XLOC_073588 XLOC_010689 XLOC_038784 XLOC_145559 XLOC_154157 XLOC_003677 XLOC_143041 XLOC_024513 XLOC_147198 XLOC_144975 XLOC_125883 XLOC_092625 XLOC_097858 XLOC_012736 XLOC_018828 XLOC_107793 XLOC_154857 XLOC_010694 XLOC_129158 XLOC_141832 XLOC_064493 XLOC_154393 XLOC_128688 XLOC_009039 XLOC_156659 XLOC_095146 XLOC_126269 XLOC_010849 XLOC_081771 XLOC_018911 XLOC_033950 XLOC_135366 XLOC_011867 XLOC_145113 XLOC_010669 XLOC_105628 XLOC_009877 XLOC_137410 XLOC_021259 XLOC_004391 XLOC_021712 XLOC_010700 XLOC_120315 Coding TCONS_00222057 XLOC_135366 Coding Coding - 7:70682995-70686837 - TSS166055 3842 2 TCONS_00222057_5 115 0.997917751171265 1 0 5.05901659931964e-07 4.79493141964255e-06 0 0 5.71135386159485e-07 1.33005749818789e-07 0 1.71054331302813e-07 1.30064629441795e-06 1.07092175724304e-06 1.48958039000441e-07 4.13638474427097e-06 0 2.44871816558218e-07 1.59623789052634e-07 0.00332700385437757 0.000192296171611 0.00859026605852141 1.86645827677117e-06 1.07770000193695e-05 6.58452760786576e-07 0.000464821333825734 0.000262264095623234 0.000504714169171867 5.63546402276529e-06 1.83380325625921e-06 1.6944788577739e-06 4.58341979923324e-06 6.31781897174857e-06 2.73853284638068e-06 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-114 417 93.48 0.0715773034877668 TCONS_00222057_9 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 2e-22 90.9 45.26 0.92156862745098 1 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 CCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGAGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGGATGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCCTGGGGTCGCAAAGAGTTGGACACACTGAGCGACTGAACTGAACTGAACTGAAGACATCACCAGACCCACTCACAGAACAAAGGACTGAGCAGAACTAGCCAGCTGTGGATGGGCCCATCCCCCACCGGAGACAAGCAGGGGAGGGCAGCCAGAGCCGGAAGGGGGCAATCTCGACCTCAGAGAGGCATCCTCTACCAAACTGCAAGCAGGCTTCACTGCTAACCAAGACTTCTTGGGATTCTGGATGGTCAATCCACTGGGAGGATCACAACCAGAGATCAGCCTCCCAGAAGAGACACACAGATCACCTGAGAAGGCGCGGCCGCTGTACACCCAGAACACCGAGCGCCGGACGGGGAGGCCATAAGACACAGCCTCCAACAGGGGGTGGGGGACTGTACTCACCAAACACCTGGTCACCTGAGCTGCTCGGACCTGGGAAGGGCACAAAATGCAGGCCCAACCAAGTCTGAGCCTTTGTGGACTACCCGAGAGCCTGAACCTGAGCGGCTTAGACCTGGGCAGTGCATGCAACCCAGGGCCTGCCACAGACAGTTCCCCGCAGAGCAACCTAGAGCCTGAGCAGTGTAGACTGGGAAAGCACACACGCCGTGAGCAGGGGCAAACCTGGTGTGGCCGAGACACTGCGAGCACTCCCCACACATGCCAGTGATATTTGTTTGCAGTGTTCCTCCCTCCCCACAGCACGATTGAACAAGTGAGCCTAAGAAAAGTGACCTCCACCAGCCCCTTGTGTCAGGGCGGAAATTAGACACTGAAGAGACCAGCAAACAGAAGAAGCTAAAATAAACAGAAGGAACCGCTTTGGAAGTGAGAGGTGCAATAGATTAAAACCCTGTAGTTAACACCGACTACATAGGAAGGGGCCTATAGATCTTGAAGAACTATAAGCCAGAGCGAGGAACTATCTGAAAATGAACTGCCCCAAACTGTCTGCAACAGCTCCAGAGAAAGTCCTAGATATATTTTTTACTATTATCATTTTATAAATTTTCATAAAATTTTTTATATTTTTAAGTCCTATATTACTCCTTTAATTTTTATTTTTATAACCTACTACTACTACTACTCAGTCGCTTCAGTCATGTCCGATTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATTGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTATAACCTACTATTACCTTGCAAAAAAAAAAAAAAAAAAAAAAGACCCTATTTTTAAAGCAAACTTCATATATATCTATATATTTTTTATAATTTTGTGACTTTGTTTTGTTTTTTTTAATATTGTATTTTTGAGAATCTAACCTCTACTCTAGATTTTTAATCTTTGCTTTTTGGTATTTGTTATCAATTTTGTACATTTAAGAACCCAATCTTCAGTACCCATTTTTACTTGGGAGTGAGATTACTGGCCTGATTGCTGTCTCCCCCTTTTGACTCTTCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCCTTCTCTTCTCTACCCAACTCTATGAATCTCTTTGTGTGTTCCAGGCTGTGGAGAACACTTAGGGAACTGATGACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCGCCTATTATCCTCCTGGCTACCTCTGTCTCTCTCCTTTTGATTCCACCTATTATCCTTCTGACTACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCATGAACATCTCTGAGGGATCCAGACTGTGGAGAACACATAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCCCTTTTGATTCCCACTCTTCTCCAAACCCACTGACATCTCAAAACTCACTACTGGACACTTCATTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAGCACTGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCCATCCAACCCCACCCACAGTGAGGAACCTCCAAAATAAAAAGGAACCACAAACTGCCAGAATATGGAAAGGCCACCCCAAACACAGCATTATAAACAAGATGAAATGGCAGAAAAATACTCATCAGGTAAAGGAACAGGATAAATGCCCATCAAACTAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAAATGACCCAAAATCTTGAAAACAAAACGGAGTCACAGATAAGTAGCCTGGAGACAAGGATTGGGAATATGCAACAAATGTTGAACAAGGACCTAGAAGAAATAAAAGAGACAATATATAATGAATAATGCAATAAATGAGATCAAAACCCTCTGGAGGGAACCAACAGTAGAATAATGGAAGCAGAAGATAGGATAAATGAGGTAGAAGGAGTGTTAGAAATAAATGAAACAGAGAGGAAAAAAGAATTAAAAGAAATGAGGACAAACTCAGAGACCTCTGGGACAATGTTAAACAACCCAACATTCGAATCATAGGAGTCCCAGAAGAAGAAGACAAACAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAGTCACCCAAGTCCAAGAAACCCAGAGAGTCCTAAACAGGGTAAACCCAAAGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAGTATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGAAGGGAATGGCAGGACATACTTAAAGTGATGAAAAAGGAAAAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCACTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAGAAAGGGTGTATAAACTCAAACCCAAAACAACAAAGTAAACGGCATTGGGATCATACTTATCAATAATTACCTTAAATGAAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAAAAACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGTGATGGAAAAAGATATTCCATGCAAATAGAGACCAAAAGAAAGCAGGAATAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAGGAAACAAAGAAGGATACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACATAGGACCACCACACTATGTAAGACAAATGCTAACAAGTATGAAAGGGAAATTAACAGTAACACAATAATAGAGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAAATAAACAGAAAAT TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 24667 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 28508 EMBV3_08791 AGGAGCTGGGGCTGCGGCTGCTGTATGCGGGCCTTGGAGACCCGGGCCAGCCCTGGCCAC Variant GeneID:509150|ETHE1:NM_001034344:160_cdna 270^418 3 EMBV3_06859 GeneID:509150 18 GENE ETHE1 MGC127386 ethylmalonic encephalopathy 1 EMBV3_25429 TCCAGTGTTCCTTCCTGGAGAATCCCATGACAGAGGCTGCAGTCCACGCGGTCACAAAGA Gene BVV0102_017738 + 0 NULL GK000024.2:61202142-61229275 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143946 1 XLOC_088366 NonCoding TCONS_00143946 XLOC_088366 NonCoding NonCoding - 24:61225909-61226492 - TSS108157 583 2 TCONS_00143946_2 48 0.495711835334477 1 0 0 1.20650149511302e-05 0 1.04454726888657e-05 0 0 2.50073230660218e-06 0 4.51122074280631e-06 0.000515193871935322 1.57062583913269e-05 0 3.57400752110422e-06 2.01715135285807e-06 0 0 0 0 0 0 0 0 0 0 0 1.20848535357955e-05 0 0 0 0 XM_005225449.1 PAOX PREDICTED: Bos taurus polyamine oxidase (exo-N4-amino) (PAOX), 3e-48 196 82.16 0.337907375643225 0 noncoding 0 0 0 0 -0.0602812619942663 0.749347698710697 0.0738881591019465 0.157870862701327 GGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGAGTCGCAAAGAGTCGGACACAACTGAGTGACTGAACTGAACTGAACATCAAAAAAAAAAAAAAGGTAGAACAGGAATTGTTTTTTGAAAAGGAAGCAGGCCAGGGCAGTCTAGCCCCTTCCCTGGCCCCTTTGGGGTCTAAAGGCCTTATTAGCCGGGTGCACTCCCACCATGGGCTTCCCTGGTGGCTCAGCTGGTAAAGAATCTGCCTGCAATGTGGGAAACCCAGGTTCAACCTCTGGTTCAGGAAGATCCCCTGGAGAAGGGAATGGCTACCACTCCAGTGTTCCTTCCTGGAGAATCCCATGACAGAGGCTGCAGTCCACGCGGTCACAAAGAGTCAGACGTGACTGAGGACTGACACGTCACTTCCCCCAAAGAGCAGAGCAGAGCCTCACAGGGCCCTGGGCACCCAGCAGAGCAGCGTGAGCTGAGAAGCTCGGGTTCGTAACGGTTACTGCAGGGAAGAGGAGAAAGGAGCTCTCCTGTCAAATGAATAAAAGTTAAAACAAAAAATTCAAGAATGGC TCONS_00139537 . 5' 2784 TCONS_00139537 . 5' 2784 EMBV3_41829 AATGTTGCTCTTACATCACATTACATTGAACACTGTCTGGATGCATGTTGAAAGACATGC Gene GeneID:541202|HNRNPH1:XM_002688484:55_cdna Constitutive 1 NULL GeneID:541202 7 GENE HNRNPH1 HNRPH1 heterogeneous nuclear ribonucleoprotein H1 (H) EMBV3_36229 TGCCGCAGCTGCAGAAGCTGGACAACCAGGCAGCGACCAGGGGCAGCTTGGCCTGAAGCC Variant GeneID:518967|C1H21ORF2:NM_001075781:38_cdna 446^617 5 EMBV3_06803 GeneID:518967 1 GENE C1H21ORF2 MGC139666 chromosome 21 open reading frame 2 ortholog EMBV3_21615 ACACAGCACAACTGGATATTATAAAAATATCTGTGAGAATTATGGCCCTACAGAAAAGGG Gene GeneID:520291|CARD6:XM_002696354:13_cdna Constitutive 2 NULL GeneID:520291 20 GENE CARD6 NULL caspase recruitment domain family, member 6 EMBV3_15000 CTGGCGAGGCGCGGTGGGTCTGGATCTTTTTTCAGAGCTCCGTTTTATGACTGTATCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21507 CCCACACCCACCTCTGGAGTTATCAGGCTTTTCTGGCAGCATGTTGAACTCTTCTTGGTA Gene BVT0101_064870 + 0 NULL GK000027.2:36159010-36212351 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36585 AGCTGCAGAGGGCATGGGGGGCTCTGATTAAGGAGAAAGAACAGTCTCGCCAAAAGAAGA Gene GeneID:510317|LOC510317:XM_002695755:213_cdna Constitutive 0 NULL GeneID:510317 19 GENE LOC510317 NULL similar to Uncharacterized protein C17orf85 (Protein ELG) EMBV3_07596 GTGTTCTATAGCTTTTCAATGTTTTCCTCTGGATCTTTACATAATGTTTTCTTTTTGCGC Gene BVV0102_173009 - 1 EMBV3_13737 GK000025.2:19583437-19857599 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06618 CGCAGCGGGAGCCGAGAGCGGCGGGAGGAGCAAATCGATACCGGCTGCATTTTGAGCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28988 GGTGACCTTTGGGTTGAACAGGAACATGACTGCAGAGTTCAAGAAGACAGACAAGAGCAT Gene GeneID:510240|RRP1B:XM_002685143:96_cdna Constitutive 1 NULL GeneID:510240 1 GENE RRP1B NULL ribosomal RNA processing 1 homolog B (S. cerevisiae) EMBV3_02775 GGAGCCCCGCTATGTCGTATCCATGGGGAGCTGCCCGCCTACGGCCGAGGCCCTGCTGTA Variant GeneID:338079|NDUFS7:NM_001038022:17_cdna 481^570 3 EMBV3_20598 GeneID:338079 7 GENE NDUFS7 MGC133683 MGC152557 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) EMBV3_43229 GTTGTGGGGAGAAGCTTTGAATGCACTGAAGAGAGTTCCTTCTGAGAGAAATAGGAGGGG Gene BVV0102_110246 + 1 EMBV3_03502 GK000001.2:71035494-71072074 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001055 TCONS_00001057 TCONS_00001059 TCONS_00001060 1 XLOC_000247 Coding TCONS_00001060 XLOC_000247 Coding Coding KIAA0226 1:70996597-71048059 j TSS509 6266 1 TCONS_00001060_8 911 0.019470156399617 20 0.878626532714094 1.76836282384091e-08 1.79914122021704e-07 0.000628775457727892 0.000232378891704962 6.66704916093504e-15 1.58204883845174e-05 4.62250810546391e-10 0.00010068059670017 0.000117494634994869 5.15867462327233e-06 1.60553355542311e-05 2.72598232499793e-74 0.000100880123793328 6.18288145159982e-11 9.16843075123663e-05 0.00132990431859413 0.000129774584136932 0.000120122893746815 0.000419236409865374 0.000895536067353459 0.000338058691040803 6.51142585153063e-05 7.0790810505446e-07 3.04901973232732e-08 0.000160813883723484 0.000155388137953017 0.00030265639146608 0.000112949745819482 2.59040399851573e-19 5.8260574613714e-09 XM_005201392.1 KIAA0226 PREDICTED: Bos taurus KIAA0226 ortholog (KIAA0226), transcript 0.0 9779 99.18 0.872805617618896 NM_014687.1 KIAA0226 Homo sapiens KIAA0226 (KIAA0226), transcript variant 2, mRNA. 0.0 4466 84.31 0.644430258538142 TCONS_00001060_8 sp|Q92622|RUBIC_HUMAN RUBIC_HUMAN Run domain Beclin-1 interacting and cystein-rich containing protein; 0.0 1588 91.40 0.979143798024149 2 coding 1 1 1 1 -0.128611312817124 0.392248675026864 -0.00795864437905591 0.902253825500188 TGAAGCCGGGAGAGGTTTGGGAAGGCTCCCAGAGCACGAGGAGACGGACAGGAGGACTGCTGTTGTGGGCGACTTGTTTGGGAAGAAATTCTGAAAGGAGAGACGGGGAGGAGGGAGCATTGGCAGCTGCTGGGTAATTTGAAGACTACTGTGGAGGGTTTAGTGTCAGCCAACAGCCCCAATGTCTGGTCCAAGTATGGTGGCCTGGAGCGGCTGTGCAGAGACATGCAGAGCATCCTCCATCATGGGCTCATCCATGACCAGGTGTGTTGCCGCCAGACTGATTACTGGCAGTTTGTGAAAGACATTCGGTGGCTCAGTCCCCACTCAGCCTTTCATGTGGAGAAGTTTATCAGCTTGCACGAGAATGGCCAGAGCAGCACGGATGGTGTGAGTGAGCGTGCCGTGGCTGAGCTGTGGCTGCAGCACAGCCTGCAGTGCCACTGCCTCTCAGCCCAGCTCCGACCTCTGCTGGGGGACAGGCAGTACATCAGAAAATTCTACACAGATACTGCTTTCCTGCTAAGCGATGCCCATGTCACGGCCATGCTCCAGTGCCTGGAAGCAGTGGAACAGAACAACCCTCGCCTGCTGGCTCAGATCGATGCTTCTATGTTTGCCAGAAAGCATGAGAGCCCACTCCTGGTGACAAAGAGCCAGAGCCTGACAGCTCTGCCTGGTTCCGCATATACTCCTTCAACCAACAGTGGTCAGCATTCCTACTTTGGGTCCTTCTCCAGTCTCCACCAAATCCCCCACCACAGCTTAGAAAGAAGATCTACTTCCTTTTCACTCTCTGGCCCGCCCCGAAAACCTCAAGAAAGCAGAGGGCCTGTCTCAGCAGCAGAGGATCAAACCGTCCTAGACCCTCTCCTTCCAATCACTGCATTAGCCAAGGACTCCCCCTCGACCCCCAATGAGATGAGCTCCAGCACTCTGACCAGCCCCTTGGAAGCATCCTGGGTCAGCAGCCAGAATGACTCCCCAAGTGATGCCAGCGAGGGGCCTGAGTACCTGGCCATTGGCAACCAGGACCCCCGGGGCCGGACCGCCAGCTGTCAGAGTCACAGCAGCAATACTGAGAGCAGCAGCTCCAATTTGTTCTCCTCCAGCAGCTCTCAGAAGCCAGACTCTGCTGCTTCTTCTCTAGGGGACCAGGAGGGAGGTAGGCAGAGCCAGTTGTCCAGTGTCCTTCGCAGATCTAGCTTCTCAGAGGGGCAAACGCTCACTGTCACCGGAGGAACAAAGAAGAGCCATACTCGCTCCCATTCGGACACCAACATTGCCTCCAGAGGAGCCCCAGAATCCTGCAGTGATAAGTCGAAGTTGAGAGGCCCCTTGTCCTACTCTGGTCAAAGCAGTGAAGTCAGCACACCCAGCTCTCTGTACGTGGAGTATGAGGGCAGTCAGTACCTGTGTTCAGGAGAAGGCATGTTCCGAAGACCATCAGAAGGACAGTCCCTTATCAGCTACCTATCTGAGCAGGACTTCGGCAGCTGTGCAGACCTGGAAAAGGAGAATGCCCACTTCAGCATATCAGAGTCCTTGATCGCTGCCATCGAGCTGATGAAGTGCAACATGATGAGCCAGTGCCTAGAAGAGGAGGAAGGGGAGGAGGACAGTGACAGGGAGATCCAGGAGCTGAAGCAAAAGATCCGCCTTCGTCGCCAGCAGATCCGCACCAAGAACCTGCTCCCTGGGTACCAGGAGATGGAGCATGGAAGCTTTCGGCTCACTTCCAGCAGCTCCCAGTTCAGTTCACGTGATTCAGCACAGTTCTCTGACTCTGGCTCTGCTGATGATGAGGTTGATGAATTTGAAATCCAAGATGCTGACATCAGAAGGAGCACGCCCTCCAACAGCAAATCCTTCATTTCCTCTCAGTCCTTCTCCCACTGCTTCCTGCACTCCACGTCTGCTGAGGCAGTGGCCATGGGGCTCCTGAAGCAGTTTGAGGGGATGCAGCTGCCCGCCGCCTCGGAGCTGGAGTGGCTCGTTCCAGAGCACGATGCCCCTCAGAAGCTCCTGCCCATCCCTGACTCACTGCCCATCTCCCCAGATGATGGGCAGCATGCTGACATCTACAAACTGCGTATCCGCGTTCGCGGCAACCTGGAGTGGGCGCCACCCCGGCCACAGATAATTTTTAATGTTCATCCAGCCCCAACGAGGAAAATCGCTGTGGCCAAGCAGAATTACCGCTGCGCAGGTTGCGGCATCCGGACTGATCCTGACTACATCAAGCGGCTGCGGTACTGTGAGTACTTGGGCAAGTACTTCTGTCAGTGCTGCCACGAGAATGCCCAGATGGTTATCCCCAGCCGCATTCTGCGCAAGTGGGATTTCAGCAAGTACTACGTCAGCAATTTCTCCAAGGACCTGCTCATTAAGATCTGGAACGACCCTCTCTTCAACGTGCAGGACATCAACAGTGCCCTCTATAGGAAGGTCAAGCTGCTCAATCATGTCCGGCTGCTGCGGATCCAGCTCTATCACATGAAGAACATGTTTAAGACCTGCCGACTGGCCAAAGAGCTTCTGGATGCCTTTGACACCGTTCCAGGCCACCTGACGGAGGATCTCCACCTGTACTCGCTGAATGACCTGACTGCCACCAGGAAGGGGGAGCTAGGGCCCCGGCTTGCTGAGCTCACCAGGGCCGGGGCTGCCCATGTAGAGCGATGTGTGCTCTGCCAAGCCAAGGGCTTCATCTGTGAGTTCTGCCAGAATGAAGATGACATCATCTTCCCCTTTGAGCTCCACAAGTGCCGGATCTGTGAAGAGTGTAAAGCATGCTACCATAAAACTTGTTTCAAGTCTGGGAGCTGTCCCCGCTGTGAGCGGCTGCAGGCCCGGAGGGAGCTGCTGGCCAAGCAGAGCCTGGAGTCCTACATGTCAGACTACGAGGAGGAGCCCACCGAAGCCTTGGCCCTGGAGGCCACTGACCTGGAGACCACCTGAGAAAGCACGGAAAGCGCTCTTCCTAGGGGCGAGGGTCACACATAGTGCGGAACTGAGCCACCCTCCTAAGGACTTTCCCCACTTGGTTTTATCTTTTTTTTTTAACTGTTATCATAATTATTAATTTTTATTATCTGTCTAATGTCATGTGTATTCAACCTTATATAGGTTGGTGGGGTCCAGTCTATTGTGACAATTTGCAGGTACCAAGCATTTCCATCAGAGCTGACATATGGGTCCCTAAGTGAAGCTTCCAGTGCCTCTGTTAGGGGAGTGGACAGTGAGACCCAGTTCTTCCAATATCCATGGCCTTCTCCACTTGGACCAGATCTGGTTTCAGCTGCATCTCAAGAATCATTTCCAGTTTTATTTTGTTTTAATTCTGGAGCTTCTGAGCCAGGCCTTTCTCAGCGAACTCACTTCTCCTTTGCTGCTGAAACAGGAGTGTGGAGTTTTCTCTCTCCCAGTCCTGGAACAGGGTCACACCCTGAGGAGAAGCATCAGAGAATGGGACTGAGTCATGGGCATTCTTATGTAGGTGCTTCTGAGGCCATAAAAACAGTGTTACTGCTACCTTGGACTCTTCAGACACCTCGAAGAGGCAGTAATAACTTTCTTGTATTTTAGGCATAGATGATACCACAGGCTGACTTTCTTTGTCTACCCTGGGGGACTTGACACAGACCAGAATTGATACTTAGACCAGGACTATTTCAAGCATAAGTGAGGCCACAACTCTTGTATAAGGAGCATTTGTTCAGTCAGAGGAGCTGTTGGCCTCCTCTTGGGTGATAAGGTCCCTTTTAGTCAACATAGCTCTGGTGCAGGTTTGACCTTTCAAGCTCAGACAAATCCCTGGTGCCATCTTAAACTGAGGACAGAAGCCCCATCCAGCATCTCATCCGTGAGTCTCTTGCCACTCTGTCCTCTGTTAGGAGGTCACTGCAGTTCTGAGTAGAAGCCTGGCCCAACTCCATGCTCTCCCTTCCCTCCTGCAGTGGGGCTGGGACCCTCCCCAGTGGTTGAGCTCGGGGCTTAGTTTCTTTTGTCAACGTTGAGGTGAAAGCTTCCTGCTATTAGTGGTGTTAAAAGACTTAATAGTTTGTGGCTGTGACCATGAATGTTCCTGTGTTCTTATGATAACAAGAACCTTATGCCAATTATGCACTTAACTCTTTAGCCTGGTGACAGTAGTATATGCAGTCATCCTTATTACTAATTTTAACACACACCCACACCCTTTGTTAATGTGTGTTTTGATGGGAAAAGTTTTTGAAGGGACTGTGTATATGTTTGTGGCATTCTTTAAGTTGCTGTAGCTCCTGACCTGTCTGTAAAGCACTGGTCAGGGTCACAGCTCCAAGGGCTGGCAGCTCTGTGAACTAAAGCCCACAGCATTTTAGTTCTGGGGCTGACTTCTTCCTGGGTGTCTGTCTTTCCATAGTTGGTTGCTAGTAGGGAAAAACCTGCTGTGGGCGCTGCCCCGGGAAGCTGAACAGAAAGTTGCACGTGGTTGGTGGAAGCTGCTGAGTGTCTGAGTCGGAGGCAACCAGGAGTGTCACTGGAAGTAGTAGGGGCGGTAAAGTAACAGAGCTGAGGCTCCCCCAGGACAGGAGGGAGTGGGAAGAAGTTGGTGTCTGGCATTGGTCCCTTTGCCTCAGACTTGGGATCTGAAGGCCACGTCAGGCTGGAAGACCCTGAGGCTGTTCTCCCTTCAGTTCATGGCAGGGGCAGAGGGGCTGTGAAAGCGCTCCAGCCCAGCCCAGTGTTGAAGGGCAGACTAGAAACTCCCTGGTCCATCAAGGAGCTTCGGAATGACATTGTGAAACTCTAGCCTCGCTGAGAATTAGGCCTCAGATTCAGACTGAGATGTTTGTGAAAATGGTGAGCTCTACTTCCAGTCCTGGTTTAAATTGAAAATCCAGCTCCTTACTCCAAGTCACTACACTGGAGGAAAGATGTCCTCTCGTTACTGTCATGCGTGTTTCATGTAGCACAGGATGAAAGGATGGAAGACGCTGACACTTTCTAAAGCTGAGCTCAGCAGTGTGCTCCGGGGTTTTCACTTTTTTTTTTTTTTTTTCCTCCAGCTCCCCAACCCTGTCCCTCTAGGCTGCATATTTGTTTTAGTGACCTTGACATTGCTTTCCTCACTGTCCAGATACCATTTATTTATTTATTTGAGAGTAGGGGGAGAGTGGAAAGAGGATGGGGTGTTTTGAAAGCACTTTGCAACTTATCAGTATCTGAAAATCCCCACTGTTGTGGGGAGAAGCTTTGAATGCACTGAAGAGAGTTCCTTCTGAGAGAAATAGGAGGGGAGATGTGTTCTTTTCTATAAATAAAGGGAAAAAAGAGTTTGCTTGCAAGGTGGAGACAAGATTCAAGACATAGCAGAAGAGTGGAAGGCAGATATTTTCCACTTAAATGAGGCTGTTATTAACTCTGTCTACCAAGACTTTAGAGCTTTTGTTGAATTCACATAAAAGGAGCAAGAGTCTAAACAGAGATGTTCTCGTGTGTGTACAACTCGTGTTCCAAACTGAGTTTCTACTTGCTGTAATTCATACACAGCCTAACGTATCATTGTCACCTTTAATAAACTAAGGAAATGAAATTCTGCTTTTTACTTGCCTATCTTGACTATCAGGAAGTGGTATTGAGTGTCCACTGTAAAGTGGACATGTTGGAAAATTCAGGAAATTTCTGTTACGATGCAAAGAAAATTGGACCTTACAAGTCAGGAAAAGTGGTTTGGAATGCTTTGTCACTGACTTGCCACATGACCTTGAGCAAATCAGTTCACCATTCTAGACGTCTATGTCTTTGTGTATAAAGTACTTTGTAGCACTTTACGATGCATGGGGTGTGCCCACTACCAGTCCCCTTGGTGTAACGGCCCCCTGAAGCGAGTCAGATCTTCCTCTCCACAGAGTCTGAGTTGTCTTAGATGCTTCAGTCCCCACTTCTGTGAACAACCCTCTCTGAGTTTCTCTTTCATGCTTCTGGCCTGCTGGAGCTCCAGTTACACCCTGCAGCTTTCTGAACATTTCCCCTTCAGTGTCCTTTGGTCAGCTCCAGCCAGTATGTCTAAAGCCAACGTAAATATCATATTTCCTCAAACCTAACCATTAGTCACCCTGGTTTGCAAATTCATTTCCTCCTCTGAGTCAGGTGGCATTTCTGACTAGGAAAGCAGTGTCTCCTCACCACCTGTTGTCACGTTGTGGTGATTTTTCTCTTTAAATCTCATTCCTTTTCTACCACTAGCACACAAATTCAGGTTCTTATCTTAAATCTCAACC EMBV3_24260 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28906 TCCTCTTGAAGCCAACTAATTTGTAAAGTGTATCTTTCATGTGTGATTAAAAATGTGTGC Gene BVV0101_012786 + 0 NULL GK000030.2:75529562-75958543 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23637 CTGTCCATTCTTCCTTCCCCACAGCTCCTGGCAACCACCATTCTACTTCCTGTCTATGAT Gene BVT0101_028974 - 0 NULL GK000005.2:78983591-79034369 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31498 TACGGCAATCTGGAAAACCTCATCTGGCTGGATGCGCAGGGCTGGGACGCGCTGCTCGAT Gene GeneID:100300542|LOC100300542:XM_002683886:2_cdna Constitutive 0 NULL GeneID:100300542 Un GENE LOC100300542 NULL hypothetical protein LOC100300542 EMBV3_14537 ACAAGTATCATTAGTGCTGGAAGCCATAGACAGCCACCGAGGACCTGCCCGTGACTACTT Gene BVT0102_240775 + 0 NULL GK000004.2:28542267-28837028 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183499 TCONS_00183496 TCONS_00183478 TCONS_00183497 TCONS_00183477 TCONS_00183476 TCONS_00183486 TCONS_00183498 1 XLOC_111160 Coding TCONS_00183499 XLOC_111160 NonCoding Coding - 4:28776596-28792458 - TSS136901 815 1 TCONS_00183499_2 61 0.186503067484663 3 0.948805245570897 0.0163488889365129 0.00678165372992938 0.00240454197129295 0.001326596594912 0.00979145856355962 0.000266271425558589 0.00128766591419719 0.00514358347856996 0.000777130347173069 1.0243001311738e-30 1.40217559092099e-72 1.14223872996945e-25 2.34103248084299e-05 0.00349142752907125 7.21388899528549e-05 2.11530711813261e-23 0 0 0.00562749871870879 0.00310598121152406 0.00109600332583451 0 2.6729791795891e-15 3.30907566314827e-22 0.00782785379405697 0.010724577598746 0.00526144546028541 1.2588106863855e-22 2.10886107557338e-27 2.81120132943501e-59 XR_227836.1 LOC101903614 PREDICTED: Bos taurus uncharacterized LOC101903614 (LOC101903614), 2e-08 64.4 82.54 0.0760736196319018 0 noncoding CGCTAGTTTCGCTGGTAACCAAGGAGCCAACCAGATACCAATTCCCCCTATAACTGGTAACCTCCCCCCTCCTCTGGGGAGTGAAATCTGCCACTCTTTCCTTGCTTTCCTCTGCACATGTTCAGATGTCACTCCAGAACCTTGCTTCAGACAAGAACATCGGGACTAAAACTAATGATTATGAAGTGCTTTGAAAACATAACTGCATTGCATTCCATCAGCCTTGGGGCTAACCTCGAGTAGGGTTCACAGCAAATCAATTAGTCCTGGATCGTCCTGGCAGCACTGACAAGTATCATTAGTGCTGGAAGCCATAGACAGCCACCGAGGACCTGCCCGTGATTACTTCCTGAAAGTCTTAGTTTTCAGTCTGTGGAGTGGAGCTGCCCTGGCTGCACATTATAACACAAGTAATTATTCATCAAAACTTGTCTTGCTGCAAGCAATTTATTCCTCTCACCACAGATGTCCCCCGTTCTGACCCAGAGCAGCATGACTGTGGGCTAAAAATAGCTACACAATGCAGCGGGAAGCCATGGTTAGACTGCGTTTAAATGGTTCTTATGCCTTTGGATTCAGAGCACTTTCCTTGCATGGATTAACCCTAGAAGAAATCCTGGAAGGATCCTGGTGGACTAAAGTACATGGGGTTGCAAAGAGTACGACTTGGCGAGTAACCAACAAGAAGGAATGTGAAGGTCTGTGAAAGAATCCTCATTTACGGATGCCATCAACACCCAAGTGAAAGCCTGTTAAAAACATCTTGTACCGTCTTCTGCTGACGTATCTTTGTCCTGTTGATACAGAGAACTGAC TCONS_00183476 TCONS_00183477 TCONS_00183478 s 3' 585 TCONS_00183476 TCONS_00183482 s 5' 0 EMBV3_20148 CCAGTTTGCTAACAGGGTTAAGTCTGCTATTGCTGTACAAGGAGGATTGACTGAGCTTCC Gene GeneID:519739|AGPAT9:XM_002688391:40_cdna UTR3_Alt 2 NULL GeneID:519739 6 GENE AGPAT9 NULL 1-acylglycerol-3-phosphate O-acyltransferase 9 EMBV3_40877 ACGCAGCCAAGGTGAAGAACGTGGACCTCATCGAGATGCTCATCCAGTTTGGAGGCAACA Gene GeneID:533598|ASB13:XM_002692171:82_cdna Constitutive 0 NULL GeneID:533598 13 GENE ASB13 NULL ankyrin repeat and SOCS box-containing 13 EMBV3_15151 TTCATTTGGCCAGGTTCTCATCCAACGTCTGTGGTCCCCCAACCTCTGACTAACTGTCCA Gene GeneID:100336419|LOC100336419:XM_002697160:117_cdna Constitutive 0 NULL GeneID:100336419 22 GENE LOC100336419 NULL urocanase domain containing 1-like EMBV3_34924 CCTTGTTACAAAGCTTACTGGCATTACGACTGTCTTTCTGTACCGTCTTGGAAATCCCCC Gene GeneID:785946|LOC785946:XM_002688663:68_cdna Constitutive 0 NULL GeneID:785946 7 GENE LOC785946 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_19231 GAGAGTTCACACCCCAGTCCTAAGAACTTCTGTCCATTCAGCCCTTAGAGCTCAGCATGG Gene BVT0102_124444 - 1 EMBV3_14667 GK000005.2:102278445-102365053 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15251 GGTCACGCCCCGCGGCGGCCTGACCGGCAGGTCCCCCTGAGCCAGCCTCCCGAGGAGGAG Variant GeneID:615869|TRIP6:NM_001035469:302_cdna 468^854 2 EMBV3_02626 GeneID:615869 25 GENE TRIP6 MGC128885 thyroid hormone receptor interactor 6 EMBV3_34330 TAGATATAAGATGTATAAGAAGTCTTAACGGCCACAACATCTATTCCAATATATTAGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26249 CAAGGTGGTGGAGTGCTTGGACCATGCCAGTTCTACATGAGAACCAACTGACCCACACAG Variant GeneID:505499|CLK3:NM_001034248:43_cdna 607^890 3 EMBV3_03677 GeneID:505499 21 GENE CLK3 MGC128892 CDC-like kinase 3 EMBV3_23309 TCATGACAATTCAGAAAAATGATAGCTCAGATCAGAAAAACAGTGCAGACTTCAAAGTTA Variant GeneID:614176|CCDC148:XM_002685379:307_cdna 176^297 1 EMBV3_10627 GeneID:614176 2 GENE CCDC148 NULL coiled-coil domain containing 148 EMBV3_03412 CAGGTTGCATTAGTGACCATGTCCCTTACTATGACTCTCACCTGAACACATCTGATTGGC Gene BVV0102_235109 + 0 NULL GK000015.2:1627628-1640851 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060469 TCONS_00060467 TCONS_00060464 TCONS_00060466 TCONS_00060468 TCONS_00060465 TCONS_00060463 1 XLOC_036744 Coding TCONS_00060468 XLOC_036744 Coding Coding MRE11A 15:1636579-1716775 j TSS45214 6941 1 TCONS_00060468_5 415 0.057196369399222 18 0.913672922252011 1.39290211052583e-13 2.67204104556428e-18 1.47553520586534e-12 3.79490491240812e-06 3.22317313251004e-14 3.80185220470138e-13 5.16166382925044e-05 2.70166367085329e-05 0.000107212852960542 4.04209577080292e-19 0.000193251713036784 3.28438736969834e-05 1.75969548942723e-16 1.38884319755065e-83 3.69981638576246e-15 0.000459631737558604 0.00225690384213001 0.00181269913470624 3.75384912285935e-08 3.6453815296718e-05 6.68895769771297e-05 4.6901169679992e-11 3.05130747266759e-06 2.79231334835495e-08 2.78744217522397e-10 2.18707781597964e-09 2.50194074676771e-12 1.00804955025991e-97 8.67742192816503e-05 1.97446358389627e-09 NM_001192605.1 GPR83 Bos taurus G protein-coupled receptor 83 (GPR83), mRNA. 0.0 3667 100.00 0.292753205589973 NM_005591.3 MRE11A Homo sapiens MRE11 meiotic recombination 11 homolog A (S. cerevisiae) (MRE11A), transcript variant 1, mRNA. 0.0 1957 87.87 0.225039619651347 TCONS_00060468_5 sp|P49959|MRE11_HUMAN MRE11_HUMAN Double-strand break repair protein MRE11A; 0.0 674 86.54 0.997590361445783 1 coding 0 0 0 0 0.011099022945961 0.937761605542756 0.0082551236471409 0.903747214030377 GGAGAAGCTGTTACTCTCCCGCCTAATTCGGGTTTACCAACAAGCTGGTTCTGAGACGCCATCCCCGGCGGTGCTGTTGCTTTTTGTGTCGTGATTGTCCCTCCTTCTTCCCGGCGATGATGAAAACACATTTAAAATCTTGGTTGCAACGGATATTCATCTGGGATTTATGGAAAAAGATGCTGTGAGAGGAAATGATACATTTGTAACACTTGATGAAATTTTAAGACTTGCCCAGGAAAATGATGTGGATTTTATTTTGTTAGGTGGTGATCTTTTTCATGAAAATAAACCCTCAAGAAAAACATTACATACCTGCCTCGAGTTATTAAGAAAATATTGTATGGGGGATCGTCCTGTACAGTTTGAAATTCTCAGCGACCAGTCAGTTAACTTTGGTTTTAGTAAGTTTCCATGGGTGAACTACCAAGATGGCAATCTCAACATTTCAGTTCCGGTGTTTAGTATTCACGGCAATCATGATGATCCCACAGGGGCAGATGCACTCTGTGCCCTGGATATTTTAAGTTGTGCTGGATTTGTCAATCACTTTGGACGTTCAATGTCTGTGGAGAAGATAGACATTAGTCCAGTTTTGCTTCAGAAAGGAAGCACAAAAATTGCTCTATATGGCTTAGGAGTAAACACGGAAGTACCAACTTCATTCCAGAGCAGTTTTTGGATGACTTCATCGATCTTGTTATCTGGGGCCATGAACATGAGTGTAAAATAGCTCCAACCAAAAATGAACAACAGCTCTTCTACGTGTCACAGCCTGGAAGTTCAGTGGTCACTTCTCTTTCCCCAGGAGAAGCTGTAAAGAAACACATTGGTTTGCTGCGTATTAAAGGAAGGAAGATGAATATGCAGAAAATTCCTCTCCGCACAGTGAGGCAGTTTTTCATGGAAGATGTTGTTCTGGCTGATCATCCAGACATTTTTAACCCAGATAATCCTAAAGTAACACAAGTCATACAGAACTTCTGCTTGGAGAAGGTTGAAGAAATGCTTGAAAATGCAGAACGGGAACGTCTGGGAAATTCTCAACAGCCAGAGAAGCCTCTTATACGACTGCGAGTGGACTATAGTGGAGGCTTTGAACCATTCAGTGTTCTTCGCTTTAGCCAGAAATTTGTGGATCGGGTAGCTAATCCAAAAGATGTTATCCACTTTTTCAGGCACAGAGAACAAAAGGAAAACACGGGAGAAGAGATCAACTTTGGCAAGTTCATCTCAAAACCCTCAGAAGGAACAACACTAAGGGTTGAAGACCTTGTAAAACAGTATTTTCAAACTGCGGAGAAGAACGTACAGCTCTCACTTCTAACAGAAAGGGGAATGGGTGAAGCAGTACAAGAATTTGTGGACAAGGAAGAAAAAGATGCCATAGAGGAATTAGTGAAATATCAGTTGGAAAAAACACAGCGATTTCTTAAAGAACGTCATATTGATGCCCTAGAAGATAAAATCGATGAAGAGGTACGTCGTTTCAGAGAAAGCAGACAAAAGAATACGAATGAAGAAGATGATGAAGTTCGAGAGGCCATGAGTAGGGCCAGAGCCCTCAGATCTCAGTCAGAGGACGCCGCTTCCGCCTTGACTGCTGAAGACCTTATGAGCATAGATTTGGCAGAACAGATGGCTGATGACTCTGATGATAGCATCAAAGCAGCAGCCAACAAAGGAAGAGGCCGAGGAAGAGGCCAAAGAGGAGGAAGAGGGCAGAATTCAATGTCAAGAAGGGGGTCACAGAGAGGAAGAGCAGGCACTAGTCTGGAGATTTCTACTCAAGGCAGAGGTTCAAAGGCCACTACATCAACGTCTAGAAATATGTCTATTATAGATGCCTTTAAATCTACAAGACAGCAGCCCTCCCGAAATGTTGCTACTAAAAATTATACCGAGGTGATTGAGGTGGATGAGTCAGATACCGAAGAAGACGTTTTTCTGACTACTTTCAAAACTGATCAAAGAGGCTCGAGCACTTCATCATCAAGCAAACCCATGTCCCAGAGCCAGATCACCAAAGGGGTCGACTTTGAATCAGATGAGGACGATGACGATCCTTTTATGAACCTTAGTTGTTTAAGAAGAAACAGAAGATAATATATTTAATGGCAGTTTGAAGTTTTTAAGATTCGGGAAAAATTGAAACATTGCAGACTAAGAGTTTACCAGTTGAAGATTTTTTGAGTATTGCAGTTAACTGAAGAATTTGAATCATTCTTGCTTACACAGAGATGGAGAAACTAATGTATAAAAATTTATGTTTTTTAGTATCATTTCCTGACCATGACTCCACTGTCTGAGATAATTCCCAGTTCAAGGACACATAGAGTAGCCTTGGTTCTCCTTATTTTTCAATCTGGTGTTAATGTTACCTGTATTATAAATGCTCTATAAAACTTAGAAGGTTATATGACATACAATAGTTTTATTTATACTGAGTGAGAGCTTTGTGTAAATATCATTCTTGAATAAGGACTAAAATAAATCTACCATTGTACATTTCTGCTTTATAATCAAACACTGTGTCAGTATTTTAAGGTGATGACATTTAGCCAGAGTTGAGGAAAAGAGCTTTACCCCTTTTTTTATAATTTTAGTAATTTCTAGACATCCTGGATTTCCTGTACGTAAAACAGTTTATATGAACAGTGCCTAAGCTCACTGTTTGTTACTCAATATGTGTTCTTTTTCAATATATGTTCTTTTTCTAGTGCTTGTGAAGGTATCAGCCAGAGACTTTGAATGATTACATATATCCTGTACTTTGAACAACTCGATAAAAGTTGGTATCAAACAATAAAGTCTGTCATAATTATCATTTCTTATTCCAGTTGTAGCAAAGATTTTAAAAGATTGTGCTTCCATTGACTGGTAGTAATTTCCTGCATTATTTTCCATTATTAAAGTTTCTGTCTCTTCCTTATCTATTTCTAAGAGGAAAGGGTTAAAATAGTTTAACCATATTTTCTTAGAAATATTGAATCTTTTTTTTTTTTAGATAGACTGGCCAATTGAGCCTTATGGTTATATTAGATTAACAATGAAATATCACTTCTATGGAATATCAGTGCCAAGATTCCTCACTATTAATATTTTATCTTAACATTGAGCATGGGCAATTCCAAAATCTTAGAGAAGCAGCTTCTGTTACTTTTTCTTACTTGTAAATAAGAAAGGAGAAAATGGCTCTTACTACTTCTTAGGACCAAAGAATTTGACCTCTTCAGATTTAAGTTCAGTAATCCCATTTTCCTTTTTAAGACTGTTAAAAGACCCCGTTGGAGTGTTGTTCTCATCTTACAATGCAGCTATTTATTCAAACTCCTAAAGGAAGTTACAGATCTTGGTGGTGCAACAGCCTGACATTTCTTCATAGGTAGAAACAAACACTAGATGGAGCAATAGCCCTGATCTTTGGTATATTCAAACCTAGAATGTATCAAACTCCAAAAGACAACATTAGCTTAGTGGCTGGCCTGTATATCATATCCCTTTGCAAGGACCCAAGTCAAGAATTGCAATGTAGCCCTGGTTTCTTTAAAAATATTTTCTGTACTTCATTTGAGTATAGGATTATTTTAGTAGGTAGCACCAAAGCCTCAGCAGAAGGCCTTGTCCTGTGAAATACTCTCCAGCACATCTACTCCCATCTTTAATATTCCCAGTATTTGAATGAAGCAAAGATGAGATGCTTTCCACGGTGGGATGGAAGCTGGTTTGGGAGACAATCTCTAGGAAGACTCAGCTAATGACTCTTCTCACCTGCCAATCAGATGTGTTCAGGTGAGAGTCATAGTAAGGGACATGGTCACTAATGCAACCTGACAGGTTCCTGAGAAAAAGAGTAAGGACTTCCTCTGTGCAAACTGCTCTATGGTATGAAAGAGGTACTAAATGGGATACATTTAGCTCCTGTGAAAAGTAACTCAGGCAGGGAGAGAAGGTGAATTCTCCCCAGCTAATTCAGGTCGTTTTGTGAATAGCATGTCACTTCCTGTATATTGGTTGGCCCAAAAGTGTTGGGGTTTTCCATGAAATGTTACAAAAAACCCAAATGAACTTTGGGGCCAACCCTGTAGTAAGTATGGAGAAGGAAATGGCACCCCACTCCAGTATTCTTGCCTGGAGAATCCTGTGGATAGAGGAGCCTGGTGGGCTGCTGTCCATGGGGTCACACAGAGTCAGACATGACTGAAGCGACTTAGCTGCAGCAGCAGCAGCTATAGTAAGTAAAGTAGGAAAGAATGACATTTTTGATGAATTTTGCTCCATAGTTAAGTATGCCACATACCCTTTTTATTGTATATTGATGCAGTAAAATCTAGGGCTTTTTGGATGATTTTTCGAGTTGGGATAGATGTGTGGAGGTGATAACTGCAGAACCCCTGCAGTTTCCTCAGAGGCTGAGAGAAAGCATCAGTGAAAACATTCTGAGGGGAAAACTTCTTTCATCATTTACCAAAGAATATCTTTTTTCTGGCGTTTTATATCAAAAATATAATAGTACATTTATAATTCTAGGAAATAAAAGTGGTACTTAGGAAATTCAGGCATTCAGACTTCCAATTTGGGTACATATTGGATATGGTTTTCATAAATGTTTAAAATTATGAAATACAGTAACAGAAAAGTCATGTAGTTAAAGAAAAAATGATAAAGTGAGCCTCATGGCATTCTGTACAGGTCAGAAAATAGAATTTCACCAGTGCCTCAGGAGCACTGGTGTCCTCTCTAGGAAACCCCATCTTGACCTCTGCCATTGAGAAGTTCGTTCTTTTGCCACAAGGTGGTGCTTCCAAATTTAAAATTTACTCAGTGTAGTTTTGCAGTAAATTTGGAACCTATGCAATAATACTGAACCTATGCAGTTAAAACCAAAATTAGCTTTCTAATTTTATATGTAAATTGCTTGGCATATTTCACCTGGCTCAGCCTGTGTTACTAAGGAAATTGTCAGTTCAATAAATTTTACATATAAAGGTTCAAGAAGAAAATGTTTTATGTTTTAATAAAGAGAGAAAAGTCTTTATTAGAAAAATGGAATTAAAAAGTTTCCCATTGTAAAATTTTTCTGTTGAAGTGTACTGTATTTAAAAATAACTTTCCCCCAGTGTAATCTGTTGTCCTTTTTTGTATTCCTTATACATTTGTCACACTGTTTTATGGCTTGTTAAAGCTAATTATTATTTTTTTTTTTAAGCTCATTTGTTATAGAATAAAGATTTGGTTTTTTTGAGTCAAAAGAGCTTCCATATTTTTGAATGAAAAATGTCTACATTTCATCATTTGCTTATCTTATTCCCTTTTAATATTTCTGGACTTAATGTTTAATAACTAGGTCTCAAAATACTAGCAGTTTAGATAGGTCTCTATGAAGTCAGTTCATATAGCTTTCTCTTGCCAAGCACATTTGTATATCTGTTCTGTGACTGATAGCTAAATCTGATTTTAGCTATTTAAATCATACAGGCAATGCATATTCTTCAAAATTCAGACATTGAAATCTTTATCAAAACATGTATTTCCCCATAATCTTCTCCCCAAACAACCTCTCAACAGTTTAGGTACATATTTCTCTAATTGCTTTTGACATGACTGCTAACAAAAATGGTTGAACAGTCTCTGTGTCAAGGTATATGTTCACCTTAGTATTTACTTTGACATCCTGAGTTTTATGTATCTTGTTTATCAAGCTCTTTTAATTTAAGCCACCATTGTCTGTTTTTTTTGAGAGATAATTGCAGTGCTTTCCAATGTGTAATTTAAGTGTTTTCACTCTAATAATTTGGGTCAAATAAAAGAATATTTAATCTGTGTGCCTTGATGTCATAAGTGGTAAAGCAGGATTCAAAGGGCTCTTGACCAGTGATTGCACATAATAGTTGATTAGCCAAAAGAAGCACGATGGATATTAGGCTGTTTGGCCCAGGCTGCTCTGTTCTGCCTGTTAGAGCTACAGCAGTGCTTATGAATCATGTACAGCCACCCAACACTAGCACTTGAGTGCCCTTGATCACAGTACCTCATTTCAAGTGTTTCGTTTTTGTTATGTTTAAAAATCAGTATTTTCTCATCTGTAAGCTTATAAAACTGACTTCGGTCTACCTATAATTGCATTTGAACTGATTATGGGATGTATCTGGACTTTGAGCAAGTGTTGCTAGAGGTGAAAAGGCATTGCCTAGTAGAATGAGAGGCACAATTGCGTATCTGATGGTCTTTTGTTTTGTTTTGCCTGTAGGTCTTGATAGTCTAGAAATAGGACTTGTGAAATGACATCTAACCATCTGTCATAGACATACCTGAAAGCACCCAGCAGCTCATCATTCTAGTCTTGATTTCTGAGCTTTTCAGTAGTGCTTTGAAACCAGGTTACATTTTTTAAACTTTTAATTTTGAAATAATATCAAATTTATGGAAAATGTGCAGGAATAATAGAGAACTTTTTACCTTTTACTCAGATTCACCAATTTTTAACTTTTCATCATTAAAAAAAAGTATTCTGTATGTGTGTATGTTCCATGCCATTTCCTTCTCCAGAGGATCTTCCTGACCCAGGGATTGAACCCAGGTCTCCCGCATTGCAGGCAGAGGTTTTAACCTCTGAGCCACCGGGGATCCATACATATATTCATATACAAACATGAACATGTACACTTATGTGTAATTTTTTTTTCAGTCTTTGGAGAGTAGATTGCAAGGGGAAATGCTTCTTTGCCCCTTAATACTTCAGTGTATATTAGTGTGCCCTCAAATGTTGTTCTCTTCCCTCCCACATCCCTTTCTCTGCTCTATTGTAAGTAAACAATTTCATTGTTTATCTTTTCTGTATTTATTTTAGCTAAAAATGAATTTGTGTATTTTAATTTCTCCATTTTTCTTATGCAAAAAGTTGTATGCTATATAATTCTCTCCCTGCCCCCCACCAAACA EMBV3_08741 CTGCCTTGAAAAAGTCATTTAAAGTACGTGGAGGCCGGACCTTTGGGAAACTTGAAACCC Gene BVV0102_158554 - 1 EMBV3_19216 GK000010.2:93651773-93679125 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35568 TATCAGCTCCTTCGGCCTGCTGACGATTTCTGCCTTGGAGCTTTAAGACTGTGAACACGA Gene BVT0102_319154 - 0 NULL GK000023.2:8824451-8829176 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132196 TCONS_00133940 TCONS_00132195 TCONS_00133941 TCONS_00132192 TCONS_00133939 TCONS_00132194 2 XLOC_080726 XLOC_081262 Coding TCONS_00132196 XLOC_080726 Coding Coding UHRF1BP1 23:8774673-8829072 = TSS98958 9097 1 TCONS_00132196_6 1436 0.0568319226118501 21 0.833155630721718 0.000126847930807692 7.83145906914516e-06 3.47522692759953e-07 2.73568763186103e-05 0.000186780647866168 2.3069037503622e-05 2.25006205319352e-05 3.76285414883639e-22 3.24024404002697e-10 1.78699894218388e-05 1.36280182454202e-52 5.85954602373049e-38 2.68401074742173e-05 2.76120741474054e-16 1.82192139067218e-11 0.00114696490890438 2.62581438741837e-08 0.000633577622369945 0.000105922104863687 8.46251360945393e-06 6.90106445529535e-06 0.000799491961839383 2.36101666137991e-07 0.000895667023248221 0.000162740545905713 6.59874087505654e-10 2.22199187961272e-10 0.000153269723649118 0.00015431780668787 0.000282800437605762 XM_613916.6 UHRF1BP1 PREDICTED: Bos taurus UHRF1 binding protein 1 (UHRF1BP1), 0.0 1.616e+04 100.00 0.984720237440915 NM_017754.3 UHRF1BP1 Homo sapiens UHRF1 binding protein 1 (UHRF1BP1), mRNA. 0.0 6359 84.89 0.61866549411894 TCONS_00132196_6 sp|Q6BDS2|URFB1_HUMAN URFB1_HUMAN UHRF1-binding protein 1; 0.0 2589 88.45 0.993036211699164 1 coding 0 0 0 0 0.0382545570722914 0.795292000147324 -0.0114790943319463 0.831542178693492 ATGATGAAGGTGCTCCAGGAAGAGGGGTTCACTAAAAATCTTTCCCCGGACAAAATCAATTTGAGCACCCTGAAAGGGGAGGGTCAGCTGACCAACCTGGAGCTGGATGAAGAGGTTCTACAGAATGTGCTGGAGCTCCCCACCTGGCTAGCCATCACTCGGGTCTACTGCAACAGGGCCTCGATCCGGATCCAGTGGACAAAGCTGAAGACACACCCAATTTGCTTGTGTCTGGATAAGGTAGAGGTGGAGATGAAGACCTGTGAGGAGCCTCGGCCGCCCAATGGACAGTCTCCTATTGCCCTCGCTTCAGGACAGAGTGAGTATGGCTTTGCTGAGAAGGTGGTGGAGGGGATGTTCATCATGGTCAACTCCATCACCATCAAGATTCACTCCAAGGCCTTCCACGCTTCTTTTGAATTGTGGCAGCTCCAGGGCTATAGTGTCAACCCCAATTGGCAGCAGAGTGACCTCCGCTTCACCCGCATCACTGACCCACACCGAGGAGAGGTTTTAACATTTAAGGAAATAACTTGGCAAACACTTCGAATTGAGGCAGATGCTACAGACAATGGTGACCAGGACCCAGTCAGCACTCCGTTGAGGCTGATTACCAACCAAGGCAGGATCCAGATAGCCCTCAAGAGAAGAACCAAAGATTGCAATGTGATAGCCTCCAAGCTGATGTTCCTGTTGGATGACCTGCTCTGGGTGCTAACGGACTCGCAGCTCAAGGCTATGATGAAATATGCAGAGTCACTGAGTGAGGCCATGGAGAAGGCTGCCCAGCAGAGAAAGACCCTGGCCCCTGAACCTATACAGATCACCCCACCTGCCCCCAGCGCCCAACAGTCCTGGGCCCAGGCGTTTGGTGGCAGCCAGGGCAGCAGCAGCAGCAGCCGCCTCGGCCAGTACTTTGAGAAATTTGACGTGAAAGAGTCCTCCTACCATCTGCTCATCTCGCGCCTGGACCTGCACGTCGTGTGTGATGACAGCCAGTCCCGAGAGCCAGGTGTCTCTGCAAACAGACTCATGGGTGGTGCAATGCAGCTAACCTTTCGCAAGATGGCATTCGACTATTACCCCTTCCACTGGGCAGGTGATAGCTGCAAACACTGGGTGCGTCACTGTGAGGCCATGGAGACCCGAGGCCAGTGGGCCCAGAGGCTGGTGACAGAATTTCAGAGTAAGATGGAGAAGTGGCACCAGGAGACAGATCTGAAACCACCCTGGCACCTGGGGGCAGACTCTTCCTTCCGGAGGAAAGCAGATTCTTTCTCCAGTCCTCGAAAGAGCCCCCTAGAAAGAAGCCCTTCTCAGGGCCGGCAGACAGTCTTTCGGCCTCCAGCATGGAACCGCCTGCGCTCTAGCTGTTTGGTCATAAGGGTGGATGACTTGGACATCCACCAGGTTTCAACAGCTGGACAGCCAAGTAAGAAGCCTTCGACACTCCTGTCCTGCAGTCGGAATCTTCACAACCTCCCTACTCAGGTCTCTGCCATTCATATTGAGTTCACAGAGTATTACTTCCCTGATAATCAGGAGCTGCCAGTTCCCTGTCCCAATCTTTACATTCAGGTGAATGGTCTGACATTTACTATGGATCCTGCCAGCTTACTCTGGGGAAACCTCTTCTGCCTGGATTTGTACCGCAGCTTGGAGCAGTTCAAAGCTATCTACAAGCTGGAAGGTTCCAGCCAGAAAGATGAACATCTGGACATCCGCCTGGATGCCTTCTGGTTGAAGGTGAGCTTCCCGCTGGAGAAGAGAGAGCGGGCTGTGTTGCATCGTCCCCAGTCCCTTGTCCTCTGTGCATCAGGCATGACTGCCACCAATACACGTCACGCTCCATACTGTAGCTGTCCAGACCTCCAGAGTCTCTTCCGGGGTTTTGCTGCTACTGAGTTCTTTCATTCCAGTTATGTTCAGTTTCCCAAGGTACCAGGCGGCTTCAGCTTTCTGCACATGTTTTTTATGGATCACGCCTTCCAGATGGATTCCTGCCTCCCTCAGTCTAGTGTTCTCCCTCCTCAGAGGCTTAAAGCTTCCCAGGACCTCTGGTCCATCCACTTCACCCAGATCTCCTTGGACTTTGAGGGAACAGAGAACTTCAAAGGCCACACCTTGAATTTTGTGGCCGCCTTCCCCTTGTCCATTTGGGCCTGCCTGCCCCTCCGCTGGCAACAAGCACAGGCACGAAAGCTGCGTATGGCCACAGAAGGGAGACTGAAACCGTCCGCCAGCTTTGGCAGTCCTGTCCATTCTGAGGCCCTGGCCCCTGACACTGTGTCCCATCAGAGGTCAAAGACTGAGCATGATTTGAAAAGCCTGTCAGGCCTTCCGGAAGTCATGGAGATCCCAAAAGAAGGCAGCGGCGGTGTGGACAGCAACGGGCCTCTGATGGAGCTGGAGGACACGGCGGGCGTGCACATGCTTGTGCACTCCCCTGCGCACATCTGCCTGCGGCTCGACCACTACCAGTACCTGGCCCTCCTTCGCCTGAAGGAGGTGCTTCAGGATCTTCAGGAGCAGCTGACTAAGGATACAGAGGCCATGACTGGGGCTCCCCTGCAGGACCAGACAGCCTGCATTGGCGTCCTCTTTCCCAGCGCGGAGGTGGTTCTGCTCATGCATCCTCCCCCTGGGGCTGATGAGGCTGACTCTGAGGGTTCAGATACTACCAGCCTGATAGATTCAGAGCTGTCTCCTTCAGAGGACCGGGAGCTGAAGTCTGACGCCTCCTCAGAACAGGGCCCAGCAAGCCCCGAGAAGGTTCTGGAAGACAGTGGCATTGAACATCTGGATGCATCCCAGGACAGGCCATTGCCTCTCCACAGCAACGGAGAAGTACAGGGTGCAGGTTCTCTTGCCCAGCAGGAGGCAGGGAAGGGCCACAAGGCAGTTGATTCCTTACAGGCCAAGAGACCAAGCAGAGCCCAAGCATCTGACTCACCAGCTGCGTTGAAGCCCCCAGGGAGCAGGGATTCTGGTCTGAATGGACAGGGTGAGCTCATCCCCTTGAAGAACAAAGAAGGAGAATTATCAAGTGCTATTCACATGACCAAGGATGCCACCAAGGAGGCACTGCATGCCACCATGGACTTCACCAAGGAAGCTATGTCACTGACCAAGGATGCCTTCAGTCTGGGCAGAGACCGAATGACCTCCACCATGCACAAGATGCTGTCTCTGCCCCCAGCCAAGGAGCCTGTGGCCAAGGTAGACGAAGGGGCGGCAGCCCCCGTAAGTGGAGGTGCTGCCCGACTCCGATTTTTCTCCATGAAGAGGACAGTATCCCAGCAGTCATTTGATGGCGTCTCGTTGGATAACAGTGGCCCTGAAGACCGGATTTCAGTGGACAGTGACGGCAGTGAGAGCTTCGTGATGCTCTTGGAGTCTGAGTCTGGTCCAGAATCTCTTCCACCGGGATCTCTTCCCAATGCTGTGGACAGTGCTGGTGTTCAAGAGAACCCTGTTGTGGATAGTTATGGCCAGGGGTCGCCAGAGGCCAACAGTTCGGTCTCACCCAGTGGGGAAGACCTCAGTCTTCACCTGGTCTCAGTTCTGGTCCTGAAGGTGCATGAGGTGTCTCTGGGGATTGAGGTACGTGGTGAGGACCTGACTGTGGCCCTGCAAGCAGAGAAGCTGACCCTCCAGCAGCCGGGAACCGTGGGACTCTGGCAGTTCCTGCACGGACAGTGCCCAGGCACAAGCTTTCAGGACTCCTCCACTTCGAAGACTGGCCACATCAGGCCAGCTGTGGGCCTTCGCTTTGAGGTGGGGCCTGGTGCAGCTGTTCATTCCCCTCTGGCTACACAGAACGGCTTCCTGCATTTGTTGCTTCAGGGCTGTGACCTTGAGCTGCTCACTTCGGTGCTCAGTGGCCTGGGGCCCTTCTTGGAGGATGAGGAGATACCAGTGGTGGTTCCCATGCAGATTGAGCTCCTGAACTCCAGGGTCACTCTAAAGGATGATGTCCCCCCCATCTACCCCACCTCACCAGGCCCCATACCCATCACTCTGTCCGTGGAGCACACTGTCCTGAGTCGGAGTGACGATGGTGTGTTCCACATAGGCGCTGCTGCTCAAGACAGACCATCAGCCAAAGCACCTAAGAGTGAGAAGAGGCAGCCCCCCAAAGAACAGGTGTTTTTGGTGTCCACCGGGGAGGCTTTTGGTCCACAGGTGAATGAACTGCCTACCCTACGAAAGGAACTTATAGAAACTAAACAAGCATTGGCTCAAGCCAACCAGGATAAAGAAAAACTTCTTGAAGAGATTAGGAAATATAACCCCCTCTTTGAGCTCTGACAGCAGTGGCTCAGCGATCTTTGCCAAGGAGAGAGGAGGAGATCACCAGCAGTCACACCACCTGTGACAGACTCCGTCCAGTGCTGGACAAGCCGGCGGAGGACGCACAGCTCACTCCTGGTGGTGTCCTTTGTACTAGCGGTTCTGACTTGGATGGAAGACAGGGCAAAGCATGACCACGTTCCAGAAAGTTGGGGCCCACTTTGTGTGTGGCTCAGGCATCACGTCTCGCCTGTCCTTTTGGCCCTCGGCACACTAGGTGGAATCTTCTCAACACTGTAGGGTCATTTCACCACCTGGTTTCATGGCAGAGACCTTTGCTTGCTCCACAACCTGTGTGAACAGCGCAGAGTTCCCATCTCCTTGTTCGGTCACCCACAGAGTCACCAAAGGTTCTGTGTCTCAGAGCTTGCTTTCTGTAGTGGACCTGGGAAGTGCTGCGGCGGTAGAATGGAACAGGAAGTAGCCAGCAAGGCGGGAGCCAGGGGAGGCACAGGAGTAAGTGAGACATGGATTCTGCCTTGTTTGGAAAGGAAACTAAGCCCCTGTCATCTTGGCTGATGTTACAATCAGATCGTTCAGGGTTAAGCTTCCTCTGTGTGACGCCTGTCATCGCTGTGATGCTGTGGTAGGAAGTAAACAGCAGTAGCGGCTCCCTTGTATCACCTCTCCCTTCTGTAACACAGTGTGTTTGAAATTTAAATCAAGAAACGATTCACTCTGGGCTAGGTTGAGGTCAAGGCTTGGTGGGGATCGTAGGAGAGCTTGGTTCCTACTGAACCCACTATTGCCAGCCGTGTCCTGTCTGTCTTCCACAGCTGCCCCTCACAGGTTTTTTCCTGTCTCCCGGGGGTCCCTGGCACATCAGCTTTCCCAGCGCTGTGACTTCCTACCAGCAATCTCCTTAGTCCTTGGTGGTGTCGGAACTGAAATTGTGTTTTATACGGTAACATAAACATCTCAGCAGTTGCCTCTCACCTGCCTCTACCACTGTGGCTTTTTAAAATCATGTTATTTTGACTTGAGTTAAAAAAAACCTTCAGCATAGCTAGGTTTTGCCCTAACTGCTGAAAGAGCTATTTCCCCCTCTTTCTTCCCTAATTCCTCCCCAACATTCTATCTTGATCCATACTGCTCTGTGCTGTACTTCAAGCTCTGTTGATTGGACAGAACTGTTCATCAGCGAACTCACCTTGAATTGGCGAGATGGTAAAATAATGATTTAGTAGTGTCACTAAAGTCTTAATCACACATGACCTACTAGGGGAAAGATAAATGGTTTCCTTTATGGGGAATCATGCCTGACTTGTATATTCTAGTATTTTGACGATAAAAAGAAATATACATTCAAGAAGGAACAAGATCTAATTTGCTCAGACTTTTAAAGGCTTTTTGTTGTGATTTAAAACTAAGACAGTTTTAAAAACAGCAATTGCTATGAGTTTATGGGGATATCCTCTCATGCTTAGGAAACAGCTGAGAGACTTAAGAATAAACATCTTTCTGAGAGAATGTCAACAGTGGAAGTTCCCTATCGGTTGATGCTTGGTTTAACCTTATTTAAGAATTTTATAAATAACCTGAAAGTAGGATATTATAATGCAATCAAATGTCACTACTTCCAGGCAGTGAAGATAAACCAGAGGCGATTAAAAAAAAATTATTTGGCAAAACTAATACAATTATGAAAAGTTTAAAAATAAAATAAAATTTAAAAAAAAGTTTGCAGAAGATTCAAAGACTGGGCTGTGAATACTCAGGAAAGTGTCAGGTGAGATTCTCTATAGGTTAGTGTGAAGCAGTGCCCTTAGGGGAGAATAAGCAACCACTGAGACAGTGAGCCCTGGAAAGAGCTCAGGAAAGAAACCTAAGCATTGCCATAAGGGAAGAGGGGTCAGAGTGCTGCTGTAGGGCGTGTGGAGCCAACACAGAAAACAGCATCTCAGAAAAGACCATGGTAACGCCTTAAATGATCTGTGCACTTCTAGGGGCCTTACTTACAGAGTATGTGGTGAAAGGTGAAAAGGTCTAGAGAACAGCAAAAATCATCAGGGGTGGAGGTACACGTCTTTAAAATGTGAGCTCCAGTTCTGAAAAGGATGAAAGCTGAGGGTAGTGTTAGGTCAGATATTCAGTCAAGATCCAGGGCATGTGCTTCGGGTCCCACAATACTAGGGCTGGCCCTTGTAGCCTTAGCACCTACAAGCACTTCTTGTAGCAAATCAGAAACTCCTAGGGCTCTCTGTTTAAGAAGTGGTGCTGTAAGAAAGTATATTGGTGCAGAAGGTTTACGAGGAATCCTTGCACGATGACTTTCCAAAAGGAATTATAGGAAACTGGGGTTATTTGGTGATATACAATGGAGTTACCCACTGCATCCCTCCACAGACTCCCCTTTAAGTGCTTCTGTCAAAGGCAGAATGATGAACAAAAAGGATCACTGGTCCTCTCCAGCGTGGCATGTCTAATGTTCTTAGAGGGGACAGAGGAAGAGCCAGTAGCCAGAAGACAGAATTATCCAACCTCGGGCTCACCTGCATTGGTCTCAAATCACATTCTGGTTCTCTTCCCTTCCCCTGCTTTCCTGCCCTCCCTGTCCCTCCATGCGAAGAGTTGCCTGGTACACTTTCTCTTTAAGTGTCCGCTTGGTAGGAGGCAATAGAAACAAATCTGGCCAGCGCCGAGGCTCACCCCTTTAATGACCAGAGCTCGCTCAGGTTTCTGGGCTCTGTGGCGCTCTTGTCCATGTGACAAATGTAGCCCTAGAATTTGAATTTGCTTATGTGATAGCTTTGGCCATTGTCTTGAAGTTCCTCACTCAGGAAATACGGTAGAGGGTCAGCATCCCATGGAATTTTAGTAAAAGTCATCTTGTATAACTTCATACTCCTATTCACTGGGGGGAGAAAAACTTTCATAGTGAAGAAATGTGACCTTGTTGGTAGTCCTCAGAATAAATGAAAAGGATGGAAGGAAAAAAATAGTAGTATCAGCTCCTTCGGCCTGCTGACGATTTCTGCCTTGGAGCTTTAAGACTGTGAACACGAAATAATAATACCTCAAGAAAATGTCTGGAGTGAAACACCCCTATCCAAGAGACTTCCGCCACTGCAGTCACCGTGTCAGCTGTGAAGCGTTTACACCTGGTATTACCTGTGACTGTCTAGATTTCCTGTTTACATGGAGGTACTGGAGATATGCTTTAGTGCAAATGGACTGGTTTAAATCTCTCTTAGCTAAGCTGCAGGGGTGCTTAGCAATCTCAAATCCTGTTTTTAACTCACTGGAATCATCTGTAAGCTAGTTTATTAGACCTAAGACAGAAGGAATGGGTTCTAGTCTAACCATGGCTGCTTTTTGCTGTGCATTTAATCTGACCCTCATTTTGCCATGGGCCTCAACCTTTATGTACACTTTTTCATGGTTCTGAAAGGAATGGTTCCTGTATTTGGAATATACAAGGCTTAAGGCAGCCCTCACATACCGCATAACTGAAATTCTTCCATTTCATCCACTTACGTCAGTTTTCCCATAGGCTAGTTTAGGGGGTGGTGGAAAGGTGGTGTAGTTTGAACATACCGATACAGGAACTTTGCATTCCAAACCTTTAAACTAAGGTTGGTTCGTTTTTTCCCTCCCTTATATGTTTACCTTAACTTCAAAAACAGTTAATAGTAATATCACAAAATGATGGAAACAGCATTGCTGCGCAAGCTAGTGGGATGACATCTGGCTATTTGAGAACTCCAAGAGCTGTCATTGCTCTGTGATTGACCATAGTCATTATTGTGCTTCAAGAGATTCTGCTGTGATTGAGGTCCTCTCCTTTCAGGGACTATAACCTTCCCTGGAATCTTCCCCTACCTCCTGCTGGAGGAGGAATATTCCCATTCACCTCTGGGTAGGTACATACAGTTGCTGTTGTTGAATGGGGATTATTTTTTCCATCTCTTACAACAGATACAAGGGGGAATACTCTTAGATAACCTTCAACTTGAGGCTTTGCTAAGTGGCTATACTTGGGATGTGAACTTTCTTCCTTATTATCTGTAAATTTCAGCCTTATCCAGTATCTCATATTGCAATAGGTATAGCTCCTATGACCACTTAAAAAGCTTCCTCTGGAGCTGAGATATGTATTTTTGTTTATTTGGTTTTCCCTGCAGTTTTTGGTCAAGATTTAGCCTGAGTCTTACAGCGTTTCTTGGTGAAATGCACCACTGAAGTGTCTTCTCCACTAGCTAAGTACATGTTTAAAGCCACAAGTTTTAATGCTAGACACTAAAATCCAGATTTGCCCAACTTTGTGTCTAAGCTGTTTCCCCTGCTCAGGGTGCTAACCAGAATTGGAATCTTTACTGACATGCTCAGGAAAGCTTCAAAAGCAAAAAGCTTCAGAACCCTTCTCCTTATGGTACTGAATGATAGAGAAGAAAGAACGCTTGGAGATTGCCCATTGCCAATTATACTACAGTAGCCTTATTACTGCTAATCACTGTCAATAAAAAGTCCCTCCATTCCCCTCTTCTTGAGGAAAACAATGAGAATGTATCCAATGAACTGGAATATTGGTCAGTATTGAGAAATTTTAATGTTGCAATATCTAATCAAACCTTGAGTGTACTGGTTCTGTGAACCACCTGAAAAAAGCAAATTAAACTTATTAAACAGTATTGGTTCTGGTATATCTGTTTATAGGAATTGAAACACATAGGCATTTACATTGTTTTTAAGTGCTTTAAGTATTCTTTATGAGATACAATCTTAATGGTTCTAGTAGGGATGG EMBV3_39738 ACATATCCACTGGTGCTTGTGACAGTGAGTTGGGGCAGAATGTTAAGAGCCTGGCACTGA Gene BVT0102_190857 + 0 NULL GK000007.2:44717849-44722412 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13521 AGCTTTCATAGGACCAACATCGCTTCCATATCCTCCCCTGAGTCCAGAGCTACCAAAACC Gene GeneID:787191|BOSTAUV1R412:XM_002695268:6_cdna Constitutive 0 NULL GeneID:787191 18 GENE BOSTAUV1R412 NULL vomeronasal 1 receptor bosTauV1R412 EMBV3_15237 CTGGTACAGTCTCGACTCGCTGAATCGCCCAGTTTTTCATACAGGGTCTCTTCCTTCAGT Gene GeneID:515573|UBE2I:NM_001099372:174_cdna Constitutive 0 NULL GeneID:515573 25 GENE UBE2I NULL ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) EMBV3_42586 CAGTGCCTTGGAGTTACCCAGATGAAAGCCAAGAAGGATCTAGAAGAACCAAGAAGGTGG Gene GeneID:615527|CENPL:NM_001034782:201_cdna Constitutive 0 NULL GeneID:615527 16 GENE CENPL DJ383J4.3 centromere protein L EMBV3_19040 AGTACTTCACCATGCCTGAGCCAGCGAAGTCCGCTCCTGCCCCGAAGAAGGGTTCTAAGA Gene GeneID:616868|LOC616868:XM_002697471:113_cdna Constitutive 0 NULL GeneID:616868 23 GENE LOC616868 MGC133641 histone H2B-like EMBV3_32481 TTTAGAGCACCAGAGGACCCCCAGGGTCTCGCAAGGATCAAAAGAACCAGCTGAGGGCGA Variant GeneID:540155|GANAB:XM_002699287:221_cdna 564^629 1 EMBV3_38523 GeneID:540155 29 GENE GANAB NULL glucosidase, alpha; neutral AB EMBV3_33028 CAATGGCTTCGAGACAACCAGAAGTGCCTGGTGGAGGAGGGAGAGCCCAGCGTCTCCCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37308 CACACCGTCAGACACTTGTGAAGGCACACTAAACGGTGTGAGATGAATCGCTTCTTAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36707 GCTTGTGCAGGGCTTCAGTGACATGCAGGAGCTGGAATCATGCAATAAGACACAGCGACT Gene GeneID:786890|FBXO48:XM_002691435:113_cdna Constitutive 0 NULL GeneID:786890 11 GENE FBXO48 NULL F-box protein 48 EMBV3_35218 TGAAGAGGAAGCCATTGTTCGCATGATTGAGTCCAAGCACAAGCGGAAGAAAAAGGCCTG Gene GeneID:519974|NSMCE2:NM_001075797:38_cdna UTR3_Alt 3 NULL GeneID:519974 14 GENE NSMCE2 NULL non-SMC element 2, MMS21 homolog (S. cerevisiae) EMBV3_20357 TGCTGAACATGCTGAACATCTCCCCCTTCTCCAGCCAAGGTTGAAGCAAAGGAGGAGTCG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 611^945 11 EMBV3_14209 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_08232 TGGAAGCCGGCCCTGTGCGCACCTTGCCCATGCCTTGGGTTAAGAAACTCATCCATTTCA Gene GeneID:785016|DUSP7:NM_001101294:346_cdna Constitutive 0 NULL GeneID:785016 22 GENE DUSP7 NULL dual specificity phosphatase 7 EMBV3_01340 ATACTGAAAGAAGTAGTTGCTGAAACCCTGAAGAAGCACGGGATCACGGAGGCTCACGGG Gene GeneID:617904|MTBP:XM_002692838:206_cdna Constitutive 1 NULL GeneID:617904 14 GENE MTBP NULL Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa EMBV3_23273 TTGTCCTTCTCTTTTATTTGGGCGACTCGGATACTACGGAGGAGCAGAGGTAGTGGATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10959 GCCGAGCCTGCTCCTGTAAGTAAAGAACAGTCCAGACGCATCAAAGAGGTATCTGGCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33278 GGTCAAAAAGTGCCTCAGTTCCATGGCAAGGTCTCCCTCAATGCTTGGTTCTGGTCCACA Variant GeneID:513258|PGAP3:NM_001105363:127_cdna 294^446 1 EMBV3_09918 GeneID:513258 19 GENE PGAP3 PERLD1 post-GPI attachment to proteins 3 EMBV3_00121 GAGCGAGGCCCTGGGGGACAACGTGAAACAAGGGTGCTGGATCTTTACCCTGGACAGGGG Variant GeneID:521918|TADA1:NM_001101106:23_cdna 181^338 2 EMBV3_29476 GeneID:521918 3 GENE TADA1 TADA1L transcriptional adaptor 1 EMBV3_12376 TGGGGCTGAGTGGATTGATTCTGGACAGGGCTGTTTGGTACCTGCTCATCCCTACCTTTA Gene BVV0102_014173 + 0 NULL GK000022.2:52264188-52272246 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127326 TCONS_00127328 TCONS_00127331 TCONS_00127327 TCONS_00127329 TCONS_00127325 1 XLOC_077627 Coding TCONS_00127331 XLOC_077627 Coding Coding CDC25A 22:52249312-52266257 j TSS95263 3748 1 TCONS_00127331_2 344 11 0.779449952785647 0.00305553588212089 0.00309803526824337 0.00376633389745444 0.00591778406264886 0.00690996379276538 0.00226846207467592 0.00440847488371448 0.00577083045292251 0.00664687988072753 0.00259999566485288 0.000850003845955829 0.000429118560073759 0.00135819867926128 0.00117376992989706 0.000845008329191288 0.027104295912431 0.00830239420926679 0.0208678540761859 0.00770184442483448 0.00970649888199704 0.00173191890050696 0.0101929263422043 0.00510673793538458 0.00716033291313473 0.00463276757477151 0.0041633046693049 0.00126134326712343 0.005203757313714 0.00395150790638527 0.00775390197806681 XM_005222839.1 CDC25A PREDICTED: Bos taurus cell division cycle 25 homolog A (S. pombe) (CDC25A), transcript variant X1, mRNA. 0.0 5326 99.97 0.788420490928495 XM_005265629.1 CDC25A PREDICTED: Homo sapiens cell division cycle 25A (CDC25A), 0.0 2498 79.07 0.787620064034152 TCONS_00127331_2 sp|A7MBD1|MPIP1_BOVIN MPIP1_BOVIN M-phase inducer phosphatase 1; 0.0 713 100.00 0.997093023255814 2 coding 1 0 1 1 -1.42585405662014 0.00974186428221136 -0.0809851713958591 0.158461494723665 TGCTACCCTGTACGTGCTCCATGTCATCTGGTCTCAGAAGCTAAGCAAGCAAGTCTTTGAGTTTAAGAAGCCAATAAGACCTGCATCTCGAGGCTGCCTACATGTTCACGGACTGGAGGAGGGTAAAGATGTCTTCACACAGAGGCAGAACTCCGCCCCAGCTCGGATGCTTTCCTCAAATGAAAGAGATGGCAATGAACCAGGGAATTCCATTCCTTTTATGCCCCAGTCACCTGTGACTCCCACTTTGTCTGATGAGGATGATGGCTTCATGGATCTTCTTGATGGAGAGAATTTGAAGAATGATGAAGAGACCCCATCCTGCATGGCCAGCCTCTGGACAGCTCCCCTTGTCATGAGAAGAACTAATAACCTAGGCAATCGCTGCAAGCTGTTTGACTCCCCTTCAGCGTCGTGTAGCTCTACCATCCGGTCAATGTTGAAAAGACCAGACCGATCACTAGAGGAGTCCCCAGGTGGAAGCAGGAAGCGGAGGAAAAGCGTGGCTGGGGCCAGTCCGGAAGAGGCAGCTAGTCCAGAGAAGCCCCAGGAGATTCTACATCATCAGTCTTTATCCCTAGCATCTTCCCCAAAAGGGACCATTGAGAACATTTTGGATAATGACCCAAGGGACCTTATAGGAGACTTCTCCAAGGGTTACCTCTTTCATACCGTTGCTGGAAAGCATCAGGATTTAAAATACATCTCTCCAGAAATTATTACATCTGTTTTGAATGGCAAGTTTGCCAACCTCATTAAAGAGTTTGTCATCATCGACTGCCGATACCCATATGAATATGAGGGAGGCCACATCAAGGGTGCAGTGAACTTGCACATGGAAGAGGAGGTTGAAGAGTTCTTACTCAAGAAGCCTATCGTACCTACGGATGGCAAGCGTGTTATCGTGGTGTTCCACTGCGAGTTCTCTTCTGAGCGCGGCCCTCGCATGTGCCGATACGTGAGAGAGAGGGATCGGCTCGGTAACGAGTACCCCAAACTCCACTACCCAGAGCTGTATGTCCTGAAGGGCGGATACAAGGAGTTCTTCCTGAAATGCCAGTCTCACTGCGAGCCCCCCAGCTACCGGCCCATGCACCACGAGGACTTTAAAGAAGACCTGAAGAAATTCCGCACCAAGAGCCGGACCTGGGCCGGGGAGAAGAGCAAGAGGGAGATGTACAGCCGCCTGAAGAAGCTCTGAGGGCCTTGCGGCCAGGCGGCGGCAGCCTCCCCGCTCTCCCCACTCCCCTCTTTGCTGCAGAGAAACTTGAGCAAAGGGGCCAGCGGCGCGACACTTGGAGAGAAGGGCGGAGGCTTCCACGTCTTAAACCTACCTCCCACCCTCCCGAGGTTGGAGCCCAGAGTTTCCCACCGCCTCTCCGTCCTTGGAAGACGTCCTTCTTCAGCAGGGCGCTCAGCCAAGGCTGTCACGTGCCGCAGCAGGGTTCCGAGCAGCAGTCAGGGCTTTCTGCCTCCTCCTCCCCCATGGTTGGATGGGCCCCCTGCGGCCTCGCTGGGCACTGGCCTTGTCTCCTGAGGGGAGAGACGGAGAGAAGACTGCCAGACGCTGCTGGCCAGACACCAAAGACGGCCCGGGAAGCACAGGTCTTTGTGGGCTAGCCCACATCATTAATTTATTCAACTTCACCAATCACTTTCTTTTCTTTCTTTTTTTTTTTAAAAAAAAAAACCAACTCCTGGAGACTTTTATTTAATTGCTTCTTTCAGTTAGAATACTGCCATCCTAGGTAGGATTTTATCATCCCGGGGGAGTACCTCTGCCTTTGATTTTTAAAGAAAAAAAGAGTAAAGGAAGGGGAAGAAGAGGGACATGAGTTGTGGGACAGAGAACAAGGGGCTCTGTCTGTCTCCCCCGGGAGGCACTGCAGTACTGGGGCTGCTGCTATTTACAGCCAAGGACTGAGACACTGGTGGGAGCAGGCACCGGACTCAGGCTCGGCTTCAGGACATAAGCTAAATCTCCCAGACCTACCTCGAAGGCCCCTGAGACCTACCGGAGGGGAGTGACCCTGCTCTTCCTCACCCTAGCTCCCTGTGATGTCACTGGGCAAGAGTCACGATCAGGAAAGCACTGGAGGCAGCTTCTGTGGGGACACCCCCAAGTCAGTGTTGGAACGTACAGAATAGGTATCCCAGTGTCGGGGGGCAAGGATGGGGGTGCTCTGTAGGATAAGGGAAGGGAGTGTACTTTTGAGTGTCTTCCTTCATTACTCCGATACTCTTTGACAGCTTCTGTTTTTTTAAAAAAATAGCCCTTTTATGAGTCAAGGAGTATGGAATCAGTGTTGGCTGGGCCCCCCAAGGGTGGGGAGAGGGGCTGGAAGTCCTGGGCATTAGAAAGGAGTGAGTGCTGGCAGAGATGACTACAGAGTGTGTTTCTCAGGAGGCAGCAGCGTGGTGGGTTTTGAAGGTAAAACTTTGAGTTTATCATGTTTTAATTTGAGGGACAGGGAGAGATGGGTCGTCACCAGTTGTCCCTCATCTCACCCCACAGAAGTGGGGATCTCGAACACCTCCCAAGGAGCTGGGGCTGAGTGGATTGATTCTGGACAGGGCTGTTTGGTACCTGCTCATCCCTACCTTTAGGCGCTGGCTTCCTCACCATCTCTGCTCCACCGGGGTGTTGCCAAGTTTTTCTTATATTCAAGAGTCAGTCTCCCCTCTTGCCTCAGCTTCCTGTTCTGGGGGTGGGGAGGAAATCAGTGATACTGGAGATGACTGGTTGCTATGTTATGGGTTTGAGTTGCTTTTGACTATAAAACAATCTTGTTAGAAAAAGTATATGGGGAGGAGGGGAACAGAAGGCCTCTACCCCCACACACACTGAGACCCATCTGAATTGGTCTCCAATCTTGTTTGTAGGGATTCTGTTGGTTGAATGCCTGAAAAGGGAGGTGGGATGGCCTTCAGATCATACCAGCTCAGCTAGCATTGCTAACCAACTGTTGCAGGCTCTGAAAATAAAAACAATCTTGAACCCATGCTCTCTGCCTGCTTCATGATGGATGTAAAGGGAACTGTGAGTCTCTAAAGACCTGGGACCACACCTGGCTAAAAGCACTGGCTAGAGGCAGTGACATTTTCTCAAGATGCCAAAGAGCTGTCATGTGGCCTGACATCAAGGTTGGCCAGATGACCTTCAGTTACTCCCCTGAGTCCAGAAGCAAACTTGTGATTCACATTGATTTACAAGATGAGATGGGGATAGGAAAAGCCTGCCTGGACTTATTGACATTCCCTGACAAGATGTATTAATTCATAGGATTGAGCAACAGGCCAGAGGGGGGACCAGTGTAAAGGAGATAGGAGTTTCAGTTGTGTTCTGAAGGAGCCAGAGAGGATACTGCAGAAGGAAATCAGGCAGATGGTGAGTTATGGGCCCACATGCAACCAGAAAAACTTGGATGTGTGATGCTGGGGGCTACTGCCAGAGTGGATAACAGCTGGAGCAAAAGTCTATTACAAAACAGAGTGGAGCCTGGATAGCAGTGAATTGGTATTCCTTTATATTTCACCCATGGTCCCACCTCAAGCCACACCATTTTGGGGATCTATCAGCAGAGAAAGTGTGGAGTCCTAAACAATGGACCATTCCCTCAGTCTTCAGACACAATTCCCTTCTGGTTTGCCTCTTTAGTAGAAGCTTGATCCCAACCTTTAAAAAAAAAAAAGTTATTAGACGATTTGTTAAGAAAGGAAATTTGTGATACCAAAGTCCAGTGGGTAT EMBV3_06704 TTCTGGGGGTTAGGACATGGAGATCTTTGTCATCCCACCTGCCACATCACCCCAACCAAA Gene GeneID:504664|NRBP2:NM_001077848:32_cdna Constitutive 0 NULL GeneID:504664 14 GENE NRBP2 NULL nuclear receptor binding protein 2 EMBV3_24946 GTCTACCTATGGGAGTTAACCCTTGCGGTCTCAAACCTAACGTACTCTGGCAAATGGATG Gene BVT0102_077764 + 0 NULL GK000001.2:136272118-136386341 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241406 TCONS_00057019 TCONS_00200893 TCONS_00057018 TCONS_00161101 TCONS_00138407 TCONS_00140821 TCONS_00118521 TCONS_00050101 TCONS_00118479 TCONS_00050092 TCONS_00151324 TCONS_00206254 TCONS_00122093 TCONS_00173128 TCONS_00058128 TCONS_00200894 TCONS_00206255 15 XLOC_148070 XLOC_034820 XLOC_122544 XLOC_097993 XLOC_084615 XLOC_085250 XLOC_072652 XLOC_030230 XLOC_072637 XLOC_030221 XLOC_092086 XLOC_124865 XLOC_073649 XLOC_104301 XLOC_035925 Coding TCONS_00050092 XLOC_030221 NonCoding NonCoding - 13:73963495-73964699 - TSS37268 1204 2 TCONS_00050092_1 44 0.882059800664452 1 0 1.13004185622304e-06 0 0 0 0 0 0 4.09380071635162e-07 0 9.09979508321271e-05 1.89491833261381e-05 5.83267113388882e-05 2.18453162327923e-06 1.61429107441537e-05 8.21774934036588e-06 0.0130691532805659 0.00823029146325297 0.015168155321807 5.95592820461312e-06 0 5.70309520122387e-07 0.0034445424446075 0.00433132108933806 0.00804931587655852 0 0 0 0.000493114516115703 0.000174809109721773 0.00102825844852026 XM_005221782.1 LOC101903487 PREDICTED: Bos taurus uncharacterized LOC101903487 (LOC101903487), 5e-06 57.2 71.17 0.0913621262458472 XR_245937.1 PPHLN1 PREDICTED: Homo sapiens periphilin 1 (PPHLN1), transcript variant 4e-13 80.6 72.22 0.118770764119601 0 noncoding GTTGTATAACGTCTTTAACTGCCTCTCCAGTACGAGCAGTTGCAATAATAACATGAGAAAAGGTATCTACAGTTACATGAACAAAGGAAAGTTTTCCAAATGAAGAGACATGAGTTACATCCATTTGCCAGAGCACGTTAGGTTTGAGACCGCGAGGGTTAACTCCCATAGGTAGACTATTATAAACAGTGGGGCAGTGTAAGCAAGAGCGCACAATCTCTCTAGCAGTTTCTCTGGGAATTTGGAATTGATATCTTAAAGCGGTAGCATTTTGATGATGAAGTGAGTGAGAGGCTCTGGCTTCCTCAATCACCGTAGCCACTGCATTTCTGGTTAACAAGTCAGCCAAGTCATTAAAGGCATTTAAAGGGCCAGGCAATCCGGAATGAGCCCGAATGTGTCCAATGAAAAATATTTTGTTTCTTTTCCAAATTTGTTGCTGTAAATTACTTAACAAATGAAATATGGTAGTCTTATTTTCAGGCAAAACCGCAGTTTCAATGTGTGGAAACAACCTGACAATATACTGAGAATCAGAATAAAGGTTAAATTCTTCATCTGCAAACATAGCAAAAGCCTCTATGCTGTTTGAAGTTTCCCATGTTTCTAAAACTTTTTGGTGATTTTAGTGACTATGGAGGCTTTACCGTTTGTTGACCCGTCAGTAAAGGCTATTTGAGCATTTGGAATAGGAGATTGTTTACATCTGACAGGAAAAATAACTGGATGTCTGGATATAAAATTTAGCAAAACATGCGAAGGTAAATGATGCAGAATTTGACCACAATAATTTCCTATGGCAATCTGCCAGTCCTCATCAAACATTAGAAGAGCATCAAGTTGTTCCTTATTATATGGAATTACAATTTCTGATGGCTCTTTACCAAATAATTTAATGCTCTGCTTTTTTCCTTTAATATCAAAGTAGCTATCAATCCCGGATAAGAAGCCGCTACCTTTTTAGCTTGAGCGGGAAGATGGACCCACTCTAGGGGGCCGTTTTGCTATAAAACCAATTTTTTGTCTGGCCACCCCAATTACACCTATGGGGGTTTTATGGCAAAGGAATTGTCAAGCAGTTGTCAATTTAATTTTTAAAATTTACATTTTAAATTTTGGGATATGTTAATTTAGGTCTAATGTTTAGTTTAGGTCTGTGTATAAATTTAAATAATAAATGTATAACCTCCTTATCTCATTTTGG TCONS_00043860 TCONS_00043861 TCONS_00043862 TCONS_00043863 TCONS_00043864 . 5' 54187 TCONS_00043860 TCONS_00043861 TCONS_00043862 TCONS_00043863 TCONS_00043864 . 5' 54187 EMBV3_36158 CAAGGAGGCTCATATCTCTGATGAGGTCTTCACGGTCCTCTATGCTGTGGTCACACCCAT Gene GeneID:784108|LOC784108:XM_002689686:117_cdna Constitutive 0 NULL GeneID:784108 8 GENE LOC784108 NULL similar to olfactory receptor Olr834 EMBV3_13505 CCTTGAACAAGTCACTTATCCTATCTGAGCCTTAATTTCCTTATTTATGAGATGAGGTGG Gene GeneID:510362|LOC510362:XM_002700138:133_cdna Constitutive 0 NULL GeneID:510362 X GENE LOC510362 NULL similar to Zinc finger X-linked protein ZXDB EMBV3_42436 GTACAGCAGTGCCCTGTTTACAACAGCTGTGCCCTGTCTCATCTGCAGCTAAGGAATAAA Gene GeneID:509788|MTDH:NM_001046038:27_cdna Constitutive 3 NULL GeneID:509788 14 GENE MTDH MGC137491 metadherin EMBV3_18162 CCCACAAATGTAATTAAAGTACATATACCTTACTTTACCAGTTAGTCAGTCTGAGAAAAT Gene GeneID:518207|ZNF345:NM_001035327:628_cdna Constitutive 1 NULL GeneID:518207 18 GENE ZNF345 MGC127522 zinc finger protein 345 EMBV3_23804 CCACTTTCTGGCTCACCTGCCAGCGTCTGTGCCCTACCCCAGAACCCTTTACAGCATAAT Gene GeneID:618330|LOC618330:XM_002707689:134_cdna Constitutive 1 NULL GeneID:618330 7 GENE LOC618330 NULL similar to cyclin I EMBV3_01631 GAAGAGCCCCCAAGTTCATTGGTCCTTCCTGCTGCACCTGCTGGATTCTGAGTCTCTTAA Gene GeneID:789519|BOSTAUV1R426:XM_002695403:12_cdna Constitutive 0 NULL GeneID:789519 18 GENE BOSTAUV1R426 NULL vomeronasal 1 receptor bosTauV1R426 EMBV3_37569 GTAACTGATTGTCTTTCCTGATTGGTAGTTTGCCTGGGTCGTCTGTCATGGTTGGGGGTG Gene BVV0101_003226 + 0 NULL GK000016.2:28291747-28373300 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23081 TTCCTTTGTGAATTGTGCTTTTATTGTGGAACCTAAGAAATCGTTACCTGACTTGAAGTC Gene BVT0102_201557 - 1 EMBV3_25711 GK000022.2:35681691-36248179 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126731 TCONS_00126743 TCONS_00126740 TCONS_00126730 TCONS_00126729 TCONS_00126738 TCONS_00126746 1 XLOC_077484 Coding TCONS_00126740 XLOC_077484 Coding Coding MAGI1 22:35957456-36028849 j TSS94962 1686 1 TCONS_00126740_1 93 0.205812574139976 4 0.976439937247871 0.000800342698373416 0.00219151907822916 3.74289816667618e-11 0.00137687063311334 0.000917557639968621 0.00159675157337428 0.00267854765877383 3.81005425509274e-10 0.00177339496740833 8.38793969720708e-08 3.72715927851482e-10 7.91702198694852e-21 0.00011991729973027 0.00101761466051961 8.43953387456966e-09 6.8500792028322e-06 3.70301120668597e-06 5.29566814703804e-06 0.00233822824430318 0.00212795349382348 6.08282790133658e-09 3.64513518883872e-128 1.97708197849628e-06 5.73659509601101e-42 0.0027184270692896 0.00277592468097519 0.00173999787997721 4.25238142059686e-96 3.29722713053031e-34 1.37303889490065e-06 XM_002696963.3 MAGI1 PREDICTED: Bos taurus membrane associated guanylate kinase, WW and PDZ domain containing 1 (MAGI1), mRNA. 0.0 955 100.00 0.313167259786477 XM_005265575.1 MAGI1 PREDICTED: Homo sapiens membrane associated guanylate kinase, WW and PDZ domain containing 1 (MAGI1), transcript variant X13, mRNA. 0.0 902 93.08 0.359430604982206 TCONS_00126740_1 sp|Q96QZ7|MAGI1_HUMAN MAGI1_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; 1e-54 185 94.62 0.989247311827957 0 coding 0 0 0 0 0.128496808484868 0.567571959169098 -0.0295811563915656 0.523923592182046 GGCGGGCGGCGGCTGAGTGCGCGCCTGGACTCCGGCAGTGACCGAGGCAGACCTTGGGGCCACTCTAAGGGCCCGCAGGCACAACCCGGTCTCCCAGAGAAGGAGAGGTGCCTGGCGTGGACTATCTCTTTGGAAATGTGAAGGAGTTCTTGGACCTCGAGCAGAGCGGGACTCTTCTAGAAGTTGGCACCTATGAAGGAAACTATTATGGGACACCCAAACCTCCTAGCCAGCCAGTCAGTGGGAAAGTGATCACGACGGATGCCTTGCAAAACCTTCACTCTGGCTCCAAGCAGTCGACCCCAAAGCGAACCAAGTCCTACAATGATATGCAAAATGCTGGCATAGTCCACGCGGAGAATGAGGAAGAGGATGATGTTCCTGAAATGAACAGTAGCTTTACAGCCGATTCTGGTGACCAAGAAGAGCACAGTCTCCAAGAAGCAGCACACCCACCTGTGAATAGTAGCATCATCGCTGCTCCCATCACGGACCCTTCTCAGAAGTTCCCTCAATACCTACCTCTTTCTGCAGAGGATAATTTAGGTCCTCTACCTGAAAACTGGGAGATGGCCTATACCGAAAATGGAGAAGTCTATTTTATAGAGTAAAGTACCATTATTTCTACTTGAATCTCTCCCTTTTTCCCCCCTATTTCCTTTCTCTTTCTCTAGCAGCTACAGATGTAAATTAACTCTAAAAGGATTGATCACATGCTGTTGGTCTTCTCTCCTACAATTTAACAAGCCTTGTACAAAAAAAGCAATTAGCATAACATCCTAACCATTGCATCTGAAGAGCTGGAGGAAGCATAAGAATAATTATTTCCCTAAAGAGTCAAACAACTAAATTATGGTGCATATATAAATTATGATATTATATATTAATATGAAGAATATATCTAGCTCCTTAGAAGAGGTAAATCCTTTGCTTTTTTTTTTTTTTCTTAATTGGGTTACAGTTTCCTTTGAGTGTTAAAGAGTTCTTCACATATTTTTGATTCAGTTTCTTAATTACATTTGTGATTTGCAAACATTTTGTCCAAATTTGATTTTTCATTCTTAACTGCATCTTTTAAAGAGCCAGAAGTTCTTAATTTTTATGAACTCTAATCACTTTCTTTTTTCCTTTGTGAATTGTGCTTTTATTGTGGAACCTAAGAAATCGTTACCTGACTTGAAGTCAAAATTCAGTCATTTTCTGCTATATTTGTTTTAGAAGTTTTACAGCTTACATTTTACATTTTGGTATATGATATATTTTTAGTTAATTTTTTTACATGGTGCAAGGCAAATGGGTTAAAGTTTGAGAATATAAAGATGTGAAAAGTCTTTTAAAATTAAAAACTTAAATATTATATAGTTAAACATTAGCAACCAATACTGGAAAGGAACAAAAAAATTTATAAAATTGAAACCTTTCTAGAAAATCTGAGCTAATATAATTTCTTAACCATGACAGTCAATTTTTAAAATTTTTTGTCCCTCCTTTTGAGATTTCCTGTTAACATTCACCATAGTATTATGAACCTGTAAAAAATAAAAATAAAAAGACCAATTAAACTTTGAAACAATTCAAAACGTAGGTAAATCTGTTCTACTCAGATGGATTAATGTTACAGGTCTGCTGTTCATGGAACAATAACAACAGAGGACATTTCTGAACAACATGAAGTATCTTATTTTG EMBV3_07732 TTGTCATGTAGCCAAGACTGGAGAAACAATTATACCTTTTACTATTCAGCGACTATGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00534 ACAGATCCAGCAAAATATCAAGGACTGGCCCATAGACGCACCTGGGAGAGCCTCCAACAT Gene GeneID:784295|KLF1:NM_001080359:56_cdna Constitutive 0 NULL GeneID:784295 7 GENE KLF1 MGC142372 Kruppel-like factor 1 (erythroid) EMBV3_04930 CATGATCCTTTGCAGAAACGACTACATTAGGTCTGCTAAAAGGTCAGAGTAATGCAGAAT Variant GeneID:614212|LMO4:NM_001034751:195_cdna 297^549 2 EMBV3_23674 GeneID:614212 3 GENE LMO4 MGC128977 LIM domain only 4 EMBV3_22944 AGGCTAAGTCTGCTCCTGCCCCTAAAAATGGCTCTAAAAAAGCTGTGACCAAGGCCCAGA Gene GeneID:100297040|LOC100297040:XM_002685179:42_cdna Constitutive 0 NULL GeneID:100297040 1 GENE LOC100297040 NULL similar to histone cluster 1, H2bd EMBV3_29121 CCTGATCACCCACACCGAGGTTTTGAAACATGGATGACCGCGGGCCAGGGCATCATGCAC Variant GeneID:790878|PIR:NM_001102358:44_cdna 497^580 3 EMBV3_15520 GeneID:790878 X GENE PIR MGC160032 pirin (iron-binding nuclear protein) EMBV3_34466 GGCACTGCCTTTGGAGGATGGAAGAGTGTAGAAAGTGTCCCAAAGTTGGTGTCTGAATAT Gene GeneID:505515|ADH5:NM_001034249:2_cdna Constitutive 0 NULL GeneID:505515 6 GENE ADH5 MGC128207 alcohol dehydrogenase 5 (class III), chi polypeptide EMBV3_00777 TTCTGGGGAAGGCCCAAATTCAAGAAGGAAGTCATTTGCCTAAAGTCCTCCAGCCAGTGC Gene BVT0101_041356 + 0 NULL GK000016.2:41138516-41507400 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20734 GGAGTCGACATACACTTCCCGCTCGTTGTCGGAGGTCTGGACATCGTAAAGGAACTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24833 AAGCGTAAGAAGTACAACGTGCCTGTCCAGAATGACGTGGAGAAAGTGGTGGTAGTAATT Variant GeneID:506605|MAD2L2:NM_001045946:37_cdna 286^357 6 EMBV3_16879 GeneID:506605 16 GENE MAD2L2 MGC137331 MAD2 mitotic arrest deficient-like 2 (yeast) EMBV3_31851 GATCCACTCCGGGAAGAAGCCCTACGAGTGCAAGGAGTGCCGGAAGGCCTTCATCCAGAT Gene GeneID:100301148|LOC100301148:XM_002695476:195_cdna Constitutive 0 NULL GeneID:100301148 18 GENE LOC100301148 NULL similar to zinc finger protein 502 EMBV3_30155 CCTTTGGCCTTCCCCAGAGGATCATCACACCAGCACTTTATACACTTCCTGCTCACAACC Gene GeneID:513152|RHOC:NM_001046138:98_cdna Constitutive 4 NULL GeneID:513152 3 GENE RHOC MGC140228 ras homolog gene family, member C EMBV3_04162 AGCTGTCAGTGGCTTTCTCAGCTGCCAACACAAGAACCTGAGCATACAGAGGAATTAAGG Gene BVT0102_109191 + 0 NULL GK000023.2:39781558-39835966 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133415 TCONS_00135175 TCONS_00133412 TCONS_00133414 TCONS_00133413 TCONS_00133416 2 XLOC_081106 XLOC_081650 NonCoding TCONS_00133412 XLOC_081106 NonCoding NonCoding - 23:39785508-39793264 - TSS99644 1104 2 TCONS_00133412_2 55 0.17481884057971 3 0.858027079303675 0.00254478648247019 0.00103643262669913 0.00247110984480903 0.000571354802267223 0.000449678070244314 0.000820501890711105 0.000639501993213832 0.000246910182901261 0.000332493998108896 0 1.6030218793904e-15 0 8.65922955627032e-05 0.000373321329913611 2.70842409474676e-05 0 0 0 0.00174671698331872 0.00391441057023437 0.00318488391478581 0 0 0 0.00128334721067515 0.00499944392351226 0.00328917365814143 0 0 0 XM_005207076.1 FOXJ2 PREDICTED: Bos taurus forkhead box J2 (FOXJ2), transcript variant 9e-53 212 84.69 0.17481884057971 0 noncoding 0 0 0 0 -1.20052045446206 0.00224991881992356 -0.0807280859872213 0.187524376107608 CGCCCACCTGCCCCTCCACCACCACACACAGCCCCAGCCTCCTCTGGCTACACCTTGTTCTTGGTCACATAGTTCTAGCACATGGAAATAAATTGGAGGTAGCAGCATACCTCTTCTTCCTAAGATCATCTCCATCATCTTGTGACCAAAGGAGAAAATAACTCCCCAGCTGTCAGTGGCTTTCTCAGCTGCCAACACAAGAACCTGAGCATACAGAGGAATTAAGGACAGAGAGTCAACATGCACATTTCTGCTTATACCACGTGGGCTTCTGCTGGTGGTCATGATGCAGCAATGAAAATCCATTCCTCACTCAAATGAAACTCAATCTTCAGACAAGTCTTGAATGATTTACTACAACCTCATAAAAAGTGTCAAAGAGATCTGTAAAACAAGACCAGTTTGCCTACATTCTTTAAAAAAGTAACTATAGAAAAGTCTGAATAATTGTGTGGTACTGTTCAAACACGTTTGACAAGCCTTCTACAATCATAAGTATGCACTTGGACTTTTCTTGTCTTATGTATTTTCTTGTATTTAGATGCTTCCCAGTGGTGCTAGTGGTAAAGAACCCACCTGGCAATCCAGGAGACGTGAGCTCGATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCTAGTATTCTTGCCTAGAGGATCCCCCGGACAGAGGAGCCTGGTGGGCTACAATCCATAGTGTTGCAGAGTCAGACATGACTGAAGCACTCAACTACACAAACTCTTTTAGTGTCATGAAAACTCATATTTTAAAATCAAATTAACTGTATTTTTCTTTATTTCAACTTCTATACCTCAAAAAAGATTCTAGTGCCTGATTTTTCCTGAATTTGGGAATACTGCTTAAATACTGATGTGGTCATTAAAAAAGATTGCAAAGAAAAGTAACTATAATCATAACCCTATTGTAATCTAAAAACAACTCATGTCAGGAAGTACTGTGTGGCTGAAATATTTAGTCATTGCCTCCTTGATCATGTCTAGCAAGAACTTGAATAAAACTTACAAAGAACAGCAGTGACATAAGCTTTTCAACTATTTCAGTCTGATTTCAAATGTCCATTGAGAGATTTT TCONS_00135174 r 5' 3934 TCONS_00135174 r 5' 3934 EMBV3_30996 TTGAAGACAATGCCTCCCTACTATCTTGGGGCCAAAATAGAATCTGATCGAGTCATCGGT Variant GeneID:509695|INTS6:XM_002691744:247_cdna 97^207 1 EMBV3_33804 GeneID:509695 12 GENE INTS6 NULL integrator complex subunit 6 EMBV3_11060 GTTTCTTTTCATCCCCATTATATTACAAGGATATGCATATTTGTTCTGGAAAAAAAATAG Gene GeneID:404131|HSDL2:NM_001104963:8_cdna Constitutive 1 NULL GeneID:404131 8 GENE HSDL2 HDLP MGC139898 MGC159702 hydroxysteroid dehydrogenase like 2 EMBV3_11516 CCTGAGTCATAGCAGAGAAATTCCACAGGGAGCCTGCATCAGTTCATTGTTAAGTTGCCC Gene GeneID:540527|EXTL2:NM_001076224:173_cdna UTR3_Alt 2 NULL GeneID:540527 3 GENE EXTL2 NULL exostoses (multiple)-like 2 EMBV3_14180 CTTTGCTGCCTTCCCCTGTGAGCTGATGCACTTGCCAGAAAAGTGGGTGAAGACCAAGTA Gene GeneID:535293|EPHX1:NM_001034629:74_cdna Constitutive 2 NULL GeneID:535293 16 GENE EPHX1 MGC126963 epoxide hydrolase 1, microsomal (xenobiotic) EMBV3_04659 TGGATTGGGACTGTCATGAGCTTCTGTGAAGCAGTCCTCTGCTACTTCAACCATGGAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15903 CAGCTACTACCACATCTACAAGCTCACGCTCTGCCTCAGCTGCCTCAACAACTGCCTGGA Gene GeneID:100299937|LOC100299937:XM_002700472:16_cdna Constitutive 0 NULL GeneID:100299937 X GENE LOC100299937 NULL similar to Proteinase-activated receptor-2, G protein-coupled receptor 11 EMBV3_27006 GAGCACACACTTCTTCCTGTGCCCGACCTTGAAACCTCTAATGTTTGCAGTGTTAAAACG Gene GeneID:539992|LYPLA1:NM_001034688:47_cdna Constitutive 3 NULL GeneID:539992 14 GENE LYPLA1 MGC126967 lysophospholipase I EMBV3_14391 TGAGCCTAAAATCATACAGGCAGGAGTGAAGTTTGTGTCAGCTTTCCCTGTGGGCACCTG Gene GeneID:614388|TMUB2:NM_001046534:287_cdna Constitutive 0 NULL GeneID:614388 19 GENE TMUB2 MGC137904 transmembrane and ubiquitin-like domain containing 2 EMBV3_21696 CCTCCTTTACTCTTCTTCAGAGATTTCCTTTCAGTGAGCAACTTTTCCATCCTCTTAATG Gene GeneID:768311|YWHAQ:NM_001078127:255_cdna Constitutive 0 NULL GeneID:768311 11 GENE YWHAQ MGC127486 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide EMBV3_21951 GTCCACAGGACTAGAGTTCAAGGAACATGTCTGTTTTCTTTGCTGCTTACCAAGTGCCTG Gene BVV0102_013575 + 0 NULL GK000022.2:17217708-17264137 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128235 TCONS_00128238 TCONS_00128231 TCONS_00128232 TCONS_00128236 TCONS_00128233 TCONS_00128240 TCONS_00128237 TCONS_00128234 TCONS_00128239 1 XLOC_077847 Coding TCONS_00128239 XLOC_077847 Coding Coding THUMPD3 22:17255237-17283636 j TSS95724 11372 1 TCONS_00128239_2 503 0.238304607808653 10 0.599901401507148 9.73028953110434e-05 4.46832979700797e-05 4.55533016820352e-05 5.68926049359393e-05 4.01064056774095e-05 1.5713421945586e-05 3.81717313125528e-05 6.02171832618912e-05 0.000147610943963894 0.000123130268083822 2.48391781369378e-17 1.60480366820538e-12 6.31129588874816e-05 5.86437248358822e-05 3.6253226931196e-05 0.000259022051108239 0.000451604264965671 0.000388550639048271 6.40196491144343e-05 9.43704479971065e-05 2.5904543894128e-05 0.000308434515978661 0.000427311006327622 0.00105910927423175 9.19377681316409e-05 5.71052551940903e-05 4.44049758621155e-05 0.000123747269665963 0.000228955907385733 0.000251747656473033 XM_005222399.1 THUMPD3 PREDICTED: Bos taurus THUMP domain containing 3 (THUMPD3), 0.0 5997 100.00 0.292296869504045 NM_001114092.1 THUMPD3 Homo sapiens THUMP domain containing 3 (THUMPD3), transcript 0.0 2028 85.65 0.155029897995076 TCONS_00128239_2 sp|Q2T9W2|THUM3_BOVIN THUM3_BOVIN THUMP domain-containing protein 3; 0.0 1045 99.80 0.996023856858847 3 coding 0 0 1 1 -0.209242671454582 0.538860894238643 -0.00790963137356687 0.875903763597328 CCTACTCGGAGCCATTATGGCCGCGCCACCAGACTTCCGTTTCCGGGTCACCGAGGCGGCTTCCGGTGGCGAGACCGGGCGCGCTAGGCCGGCGGGGTTCCGAAGCCGGAAGGGTCTACACTGACGGCCGGTTAACCGGACGCTGGGAGTGGCCAGGGACTATATTCAGGATCTTGGAAGCACTGCCAATATGTCTGATGTTCAAGAAGCTACTAACCAGCTCCTGGATGTGAATCTTTGTGAGAACCAGATGTCTATACAAGTGACTGAAAGTGGCCCCAGAAGTGAGTCTGAGCACCTCCAAGTCACTATTGGTGCCACTGTGCCTACTGGTTTTGAGCAAACAGCTGCAGATGAAGTGAGAGAGAAATTGGGGTCATCATGCAAAATCAGCAAAGACCGGGGCAAGATATACTTTGACATTTCAGTGGACAGTCTGGCTCAGGTTCATTGTCTGAGATCAGTTGATAATTTATTTGTGGTTGTTCAGGAGTTTAAGGATTACCAGTTCAAAGAAACAAAGGAAGAAGTTCTAAAGGATTTTGAGGAATTGGCTGGGAAGCTTCCATGGTCAGACCCTTTAAAAATATGGAAAATTAACACATGTTTCAAGAAAAAAAAAACAAAGCGCAGAAAGTTAAATCCGAATTCAAGTAAACAGAAGATTGATAATGGACGAGGAGACACAACAGTTGAGAAGGATGTTAAAAAAGAGTTAACTAACAGTGTCTCAGATTCACAGATCTCAGACTATTATGAAAATCCAGCCATCAAAGAGCAGGTATCAACATTAATAGGTGATGGTTTGACATCTTGCAAAGATGAGACTGAGGAAAACTCAAAAGAAGAAGCTGATCCAGAAGTGCTGAAGTTTAGAGTCACATGCAACAGGGCAGGAGAGAAACACTGCTTTTCCTCAAATGAGGCAGCAAGAGATTTTGGGGGTGCTGTTCAAGATTATTTTAAGTGGAAGGCTGATATGACTAACTTTGATGTGGAGGTTCTTTTGAACATCCATGATAATGAAGTTGTTGTGGGCATTGCGTTGACAGAGGAGAGTCTCCACCGAAGAAATATCACACATTTTGGACCCACAACTCTTAGATCTACTCTTGCCTATGGGATGCTCAGGCTCTGTGCACCTCAGCCCACTGATATAATAGTTGATCCGATGTGTGGAACAGGGGCAATACCAATTGAGGGGGCTACAGAATGGTCTAACTGTTATCATATTGCTGGTGATAATAATCCATTGGCTGTGAATAGAGCTGCAAATAACATCTCATCTTTATTGACCAAGATCCAAGTTAAAGAAGGCAAACTGCCCTTGGGCTTGCCCATAGATACTATTCAGTGGGATATCTGCAACCTGCCACTAAGAACTGGCTCTGTAGACATTATTGTAACAGACATGCCATTTGGAAAAAGGATGGGCTCCAAGAAGAGAAACTGGAACCTTTATCCAGCTTGCCTGCGGGAGATGAGCCGTGTCTGCAGACCAGGGACAGGCCGAGCTGTACTACTGACTCAGGACAAGAAATGCTTTGCCAAGGCATTATCTGGAATGGGACACCTATGGCGGAAGGTGCATACTGTTTGGGTCAACATAGGGGGTCTTCATGCTGCAGTTTATCTCCTGAAACGTACACCTCAAAGTTTTGTTCATCCTTCAGAAGAAGATGGAGAAAGATGTCCTTGGTAATACAAAGATCGAAAATGATTACTAGTATCTGTGCTTCCTGACACTGAAAATATCAGCACAAAGAACTTGCTTTGAGAGAAAAAACAGTATTAAAGATTTGGTATAAATCTCTTCACCATAGTTAGGAAAAGATATAAATGGAATAAGTCTTATAAGTAGAGCTTTTTTTTGGCACTGTTTGAAAGGGGTAGTTGAGCAATTAGTACTTTTCTTAAAAGGCTTTAAAGATGCTAAGCCTACTAAAATGCTCCGGGATTTGGGTTTAGAACATTTTCAGGCTTTGTAACAGTTCCTGTTTTCCACTGTAGGTAGAAAGCTACTCTGGCCTCATGGAAAGGAAGAGAGCCTAATCAGAGCATGAGGTTACATTTCATTGCCTGTGCAGCTTTGCTGTTTAGTTGCTCAAGTTTTTTACATTAGTTTCTAAAAATGAAGCGTTATTATGCTTTGTAAAATAGTGTTTGTTCCATGACAAGCTAAATCTTATATAAGTCTTATATATAAGACTTATAGTTTATTATCTGCCTTAAAAGTTATAACATCAGTGAATAAGATTAACACATTAATCTGAAGATAGACACTCCTATTTGTAAATAGCAGCAAATACAATGGTAAATGAAAGGGACCAACAAGCCATATTTAAAGAAATTTTATTTTTCTTTCAGTACACAGAGGTGATGCTTTTCAAAATCAGACATAAACCTGTCAAAAGTATTTTTGTTGGCTTTTCTAAAGGACTAGATAACTGATGAATTAAAAACTTCACACAAGTCCTTCTGTTATTTTTCTCACTCTGCTGTGCCGTGCTTAGTTGCTCAGTCATGTCTGACTGACCCCATCGACTGTAGCCCTTCCAGATTCCTCTGTCCATGGGGATTCTCCAGGTTCCATGCCCTCCTCCAGGGGATCTTCACGACCCAGGAATTGAACCAGAGACTCCTGCATTGCAGGTGGACTCTTTACCAGCTGAGCTACCATATATGCTTTTCTAGTTGCAGAAAGTCCTTCCCAAAACAGTGGAAAATGAAATAACCTAAAAATTAAGTCTTGTGAAACCAGTGCTTCCCTGGGACAGATTAGATGTGGAGTTTTATGTGGGATTCTGTATTCAGTTTATTTTGGAGTTCTGGCTACATTCAGCTTAGATTTTTCAGTGCCATATTAGTTACATAACAGTGCTATTCATAATTAACTTTTGATGTCTCATCTAGAATAAAAGGACAGTGTTTATTTCCTTTGAAAGAAAAGTTCAGATTAGCAGCATAATCCATAGTCCTTGTATGGTTTCTCTCTGATGTACCTCCCATTTGAGTATGAATTGGAAATGAGACATTTATAAGGGTCTTGTATCCTAGACTGGAGTTTCTACCATCATCAGAATGCACAGTTGCACTACTATAGGTTCAACATAATATCTTTCACCTCTGACAAAATAAACTGTTCAAACCTTTTAAAACTGTTAGTCCGCAGTCCACAGGACTAGAGTTCAAGGAACATGTCTGTTTTCTTTGCTGCTTACCAAGTGCCTGACAGACACATTTACCTACCAGCATGGACATTTAATATCTGTTGAACATAACGGACAATTTTGCATATTGGCTGTTCTTGAGTAAATCAAATTTGTGCCGGATCTATCATAGCTTTAGTCCTATTAAATACCATTATAAAAACATGAACAGAGTGGTTTAAGATGATATAAGTATGTAGTGAACACTGTAATGGTTCGTCATCCTCCTCCCTAGTATTGTTTTGTAATCTGGTGACAGGAACAGGAAATGTGCTACGTGAGGGACTCAGGAAAGCGAGAATGAGTTGTATATGACACTGCCACCTACTAGCTGTGTGATCTTGGTTTTTAACTTTTGAAGTGGGCCTGCTGCACCGTGGTAATGTGAAAAGATGGGGAAGGTAATCTTAATAATCTGAACAAAAAATGACTTGAGGTAACCGACCAGACATTCAATATTTTAGAGGGGGGAGAGAAATAACAGACATTGAGACAGATTTTTTAAGTTTAATGAAAGGAAAGGAAGATGGTTATCTCTCAGAGACTGACAATGTACTAGTGGCTAGAGAGAGAAACATTTGTTTAAACATTTCTTTTCAAATGTTAGTTAAGACTTTTAGAAAATTTTAGATTCTTAACATACCAATGTCAGACATGGTTCAAGTCTGCACTACAAGGACTGTAAAGTGAAAAAAAAAGGAAGTATTTTAAAATGTCTATCAAATACCTAAAGTACATTAATGCCCACAAGTGTGTATTATTAGTGAGTTAGGCAGAGAAAAGCCTTTTCCAAGTTCAGGTGAGGGGTTATGTAAGAATATAAAGTTTGAAAATTCTAGGACAAAAAATCAAATTATTGTACCTTGGTTACATTTTTAAGTTCAAGAGAAACTCTCCTGTACCAAATTTTTAAATGTGCACAATGTGGAAAAAACTATAAGAAGCTTGCTATATCAACCCTCATACCTTTGTCCTAAGGCTAACACATACACCAATCAGTTATGAAGTAACAACTGTTTAATTATATATTCCATGATGAAAGAAATTTTTACTGGAAAGGAAAATGGTGTTTTTGTTTTCCCCAAGCCCAAATTTTGAATTTCCAACTATCTACTGTTGCTTGCCCTTTCTCTGTATGTCCTACTTAAAATTAAAACTCAACATGAACCTCTTTCCCCACTAAAACCTGCTCCCTGTCCTAGCATGCCCATCCTCCCAGTAATCCACATTTAACTCTGGGAGCCACTGTAAACTACACTGACAAATTCGACAGGTATGAAAGTTGATATATATATACACTATGCTATAGCATGTTTCTTCTCAGGAACCCTTTACATTCTTAAAAATTCAGGGCCCCAAGTAGCTTTGTTTACCAGTATCTTACCATATTAGATTAAAATGAGAAAAAAAGATTTCAGTAACAAATAACATTTTCACAGAAGAAACTATTTTCCACAAAGACTGGCAATGTTGTGTATTTTTGTAATTCAGTTCTCTGAAATTTCTGCCTTAAGAGAAGGGGCTATTAGAAGCTGGATTTTTACCTCCTGCATTCAGTTGGTTGAAATGTTACTTATTTGCAATTTTGTTATTTTATGTATTGCCCATGTAGAAATTACTGGCTCACCTCAGTTATAGAAATATTCCAAGTGTTGGCCCAGCTTATTACATAGTAGCTAAAATCATTACATTAAAAAAACACTAAGTACCAAAAAGATGTCAAGCTCCTTTAAGTTTTCCAAAAGTTCTACTTTTCACTTCCAAATTTGAAATTTCATCATTGATAACTGCTGTCAGTTGTTTTCCCTGAAAAAAAGCTCACCTCCATCATACTCAGAAAAATGTCTGCCAAACAGCCAACTCGGACAACAAAAATTTGACAGTCATTCTTTTGAGTAAAATTGGTGTTCTAAGAAAACAGGAGCTAATTCAGCATGCAGTTCAATTGCATATTTTTTCTTGAGACAACCAGAGTACTTTAGCATGTAGCAGAAGCACCACATGTAAACTTTCCATTTCATAACTTATGTTTTTGGCCCAGATTTAAATAAATTTACTGTTTTCACAAGGACATCATTAAATGAAACATGAAACTCTGACCACTACACTGCAAATGGGTGGCAGTAAAGAATGACTGCTAGTTTGGTGCCACTGTATTTTGCCAAATGCTAGCAGTTTTAACCACCTTTGCTTTTCAACATTAGTGAAAATATCAGAATAAACAGATTTTAAAGTTATTCAACACTTTGTCTTAGGAAATGTTGTGTTTATTGTGCAGCACGTAGGACAGTCTGACGCTGCTGCTGACAACTAAAAGCAAAAAGCAAGCACAGCCATGTTTGTAGATTCATCCACTGTAAGGCGTTAAGTATATTTCTATGGATGAGATATTCACACACTTCATTCATGTCTGACCACAAATCTTACACTGCATTGTTAAACAGTAGCATTACCATGATTTCTTATTTTTCATCCCACACATATTCAGGAGCATCAGCTATCTGTAAAGTTTCTCTACTACCATGTATGTACGTTCCTTCAGCCAATGCCATATAGTAACTTGTCCTTTAATATACTTCAGTAGATTTTTATTATAGTTTTTTTGGAATCTATTCTCCCTCAGACCACTGAAATATTAATCTTTTTAGCATTTTCAGACATAGATGGTATAGTTGTGGGTTGAACATGTAGTCTTACAACCAGTCTTTTAAGCCAATGATTCATTCTTAAATAAGAAAAATATAAATTGGTTTATTTTGAGAAAATTTATATTCTAAAATTGTAATTCAATATAAAAGTTTATAAATTGTGAGAAAATATTTAAAACCTTATTTCACAATAAGACAACAGAATGTATTCATGTTCATGCTTAGGCACAAAGTCTACAGGATTTTATAACTACATAATACTGAGGTTTGCTGGGATTTTGAAGGCATAACCTAAAGAGTGAGTTCATACTTAAACCTACCACCTTAGGAAATTATGGAAAACTGAAGAATATACAGCACCATTCAGTTAACATCAGTGATGACATCACCACATATCATGTAGCCTCTACGCACTTGTGAGAATAAGTTATAAAGGTTAATGAGTTGAAAAGGTTGTTTAATTTTAGTATAGTATATCTGCTACATACAAATGAGTTTCATTCGGAGAGCACACTGGTGAGTCTAATTTGTTCCTAAGTATAACAAAGTTAGCCTAGGTACCTAACTAACACAATTGACTATATCGTACTATACTGTAACAGGTTTATAATACTTTTCACAGAAACATTAATACATAAACATTTTGAATTTTATAATACAGTACCCTGAAAAGTACAATAATATAGTACAAAGGCTGGCATAAAGGCATCGAGGGAACAGGCAAGAGTTACTGACTGGAGCGGGGAGAGGAGGTGGGAGATAGTAGAGTTGAAGGTTATCAGCAATAGGAGATGGAAAGCAAGCTGCAATTTCTCTCACACCTGACCTGGATGGCACAAGTTGTTTCCTTGCTGGATTCAATTCTATCTGAATAGCACAGATTCTGGGATTCTGGTTCTTCGCTGGATTCAATTCTATCTACCCTTTTGAATACCTAATCCAGTGATGTCTGGGTAGTAGCTCTTTTTTTCTCATCAGAGATGACACAATAGCTTTGGATTGCATTAACAGTTGCTGCAACCTCTATGTACTGGTCTACATTTGGATCCTGTGTCTCAAAGAGTAACAGTGCCTCCTCAAAGAAAACCCCTACATCGTGACACTGTACATGAGACATATGAACTAACTTACATGAATGGAAAGATTGCAACTTGAAGGTTCATATGTAAGGGACTTAACTGTATTACGAAAAGTTTTGACCCTGAAGACCTCCTTTAAGGAGGCAACAGGGATACAGCCAAAAACAAGCGAAGTCATACCCTGAAGGAGCAAGCTAAAGAAGTATGCGGAAAACACCCCAATTAATAATTATGATTGTGAGAAATGCTATGACAGCATTCAGTTGGGGAACCCAATATACTGGAGTTAAGGCATCATGGAAGGCTTCCTTGAGAAAGGAATGTGTTGAGACTATTCTTTTCAGTGACTGACATTTAGCTAGTCCAAGTCTGTCTTTCCATCTTGACTGCTACCACTGTATATAAAACCTCATCATTTCCTGTTTGGACTACTATAAAAGAACCTAAGTGGTCTCTAAAAGTGGTCTCTTAGGTTCTAAAGTGGTCTCTCTGCCTTTAACCCTACAGCCTATCCTGTATGTGCACCTAGATTAAATTTTCTAAAAGACTGATTCCATCAGAAAAGACAGTACCCTAAATTGGTAGTAATAGCTAAGCAAATCAGACCAGAGTTTGGATCTCTGTTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCTGACTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTCCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCGGCCCACCAGACTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCCCTGGTCCTTAATAAATTGCTATGTCTATAGGAAAGTTGTTCGGTCTCTTTGCAATCTAAAGTACCAGACTTCTGGGTCATGACCTAATGATGTATTCTATAATTAAGGTTGGCCTATGAACTTCCCTGGTTGGTCCGGTGTTAAGACTCTGTGCTCCCAATATTTGGTGAATTAAAATCTCACATGCTGCCTAAAACAAACTAGTCTTACCCTCCTGATGCGGATCCCTATCACATTTTGGATTAATAGTTGCAAACCATAATTTACCATACCTCTTCTGTGCACAAAAAAATATGATAGAAACATTTATGTTCAAATTTTATAAATCTTTTAAAAAATTAAGAGCACTTACAAAACCTTCAATTCTCTCATGCAAGTATGTTTTCATTCTACTCATTTTTTGTCCTAGGAGTTTAAGAAATAATATGGCTCTACTTCAAAAGGAGCTAAGTAGTGGGTTTGTTTAAAAAATTGTAATGAAAGTCTAAGGAAGTCAAGGACAGGAAGAGGCTAAGTGCAAGGGTTTGTACAGGAAACCCAAGGAAGAGCTAAATGGCCGACAAATGTATTCAGAGACCGTGAGGCATCAGTTTCTGTTATGAATAGAATATTAGGTAATTTGGGTTAAGTTTCTCCGTAAAAAAAGCATTGTTTCTGTGGACTTAAAACTCTATCTGAAAATCAATTTCACATATAAGTCAATAAAATCAACATTTATTGAGTACTCAGCTCTAGGTTCAGGCACCGCGGAATCAAAAACAAATCCATATCCTTGAGGAATGCATGTAGTGGGAAAATAGACAAAAAAGGAAACTTCTTTCTCAAAAAAAAAAAAAAAAAAAAATTTACTTGGAATAGTTTAACATTCCTTCTAAAATAAAAACAAAACAATCTGACCTATAAGCTTCTGAAACTACTAAAGACAGGCATACTGTAGTCCCACAGGACTGTATTTATAGTGTGATTTCCAGCCTACCAACATCAGAAGGATATAAAAGACACAGAATTCTAATGCCCCCCACCAATCTTAACTGAATTCAGAATCTCTGGGTGTGAGACTGGGAGTCTGCATTAAATAGCAAGCCAATTATGTGCACTTCTCACATTTTAAGGAAAAGTTTTAAGTTAAAAAATTTCCCTTTTAAAGTCCTATTCCTCACTAAACTTCTGTCATCATTATTTTAATGAAATCCCACTTTCCTAAAATTCATGATGTATTATTTTTTGAAACTCAAAACACATCAACACTTGCTTTCTCAACATTGTCCAAGGCAGGTTTATCTTTAGAAATGGTTTTCTGGATTTAGCTGTCAGGAAATGGCAGCCTGAAAAATCCCATGGATATCGAAGCCTGGTGGGCTACAGTCTACAGGGTTGCAAAGAGTCAGACATCACTGAGCAACTGAGCACGAGAAGAATACAAATAGGTATTGGGTTGGCCAAAAAGTTTATTTGGGTTTTTCAATATCATACGGAAAGCCCAGATGAACTTTTTGGTCAATCCAGTATTAAAACCTGCCAACCAACCAACCTGGCAGGAGTCAGGGGTGGAGTGGGAGGAACTTAAATGTGCCAGAGGTTCCTTACTGCTCTGTATGAAGAGAAAATTATCAATGTCCATATAAAGATTGAAGGCAGGAGAAGGGGATGACAGAGGACGAGATGGTTGAATGGCATCACCGACTCAATGGACAAGAGTCTGAGCAAGCTCCCAGAGATGGTGAAGGGCAGGGAAGCCTCGTGTGGGGCAGTGCATGGGATGGCAAAGAGTTGGACAGTACTGAGTGAGTGAACAACATTAAGTATTCTGCAATCCACAGTCTGTAGCTAGAGCCTCACTGTCCACAGCAGTAATTTAAATTATATAAAATATAAAATTCAGTTCCTTAGTCACAACTGCCACATATCCAGGGCTCAAGAATAATGTATGGTTAGTGGCCATCATGTCAGATAGCACACTACAGAACATTTCCATCACTGCAGAATCTTCTACTGGACAGTGCTAATCTAGAACACTAGCAAGCACACAAAAAAGTATTAACAGAGGACAATCTATCAAACCTTATAAAGACGTCTACAAGTCACTCATTCCGTTTTATTTAAGGTTGGCTAGCCATCAAGAAATACACTAGGAACTTAGGTACAACACTCAACAAGCAGCTCAGAATAGCTAAGATAATTTAAATAAGCACTGACAACCACCTGAGAAGTGCTATGATTCAACCTGCTATGTATGGGACCAAGAGAAAGGGGATTCTAGCTTAAAGCATAGACCACAGAAGGCAAGATCATAGGGGAGATGATATTTGAGTTTTAACAGTCTTTATTGGAAGGGTAAGGACTATCAAGGGTAGCACTCCAGGAGGAACCACCCCTACAAAGAGGTCCAATAATATTGTTTGGGTGTGTATGTGGAAAACTGTCACAAACAAAAAGGCTGTTAAGGTGAGGTTAGTCCATTGAGGGACCTTGTACATCACATTTGTGATGATGGAACGCATCCTGTCAGTAGTTACCAGGCAGTAAAGGAGTTGGATCGGTTACTTCCATGCTGTTATCTTTGTATGAGAACTACTGTCCTGGACACATATGAAAGTTGTATCAGCAGATACCAGAGACAAGAGATCCTAGTTCGAAGGATACTAGCCTTATGGCAACTGAGCTTGATTACTAACTCATAAGCATATCAATGAAAATGGGTTGAAAGGTATTCTAAGGATATAAAAGAGATGTTGCTGAACCTCACGTCCGGTTCTCAGCAAAGCAGTCGTCAAGATCATCTGGACTATTAAGAGGGTCAGTAGAATCCCAGCTGAGGTTAAAAAATTAAATGAAAATCAAGGTAAAGACTCCAGAATATCCATAAAAGAGGAATAAATGCATTTCTGGGCAAGAGTGAAGCCTATGCTCGAGCTGGGTAGCCTTAATTGGTGGTGAAACCTGTCTGGTTTCATGACTCACCGGGATACCAAAAACAGGAGAGGAGAAAGCCAATGGTATGACTGGGACAAGATGAGCAAGTGTAACAAACAGAAAATGGGCTGAAAGTATGAGTGAGAGTTGCTAAAAGGCCTGACTCTGAGAATGCAAGGGTGGGGAATTAAATTTTTAAGATCTAATCTAAAATGCTCTGTTTTGGCGGTGTAGCAACGGTCTCAAATGGGGAACTCAAGAGAGCATGCCTTTAACCTATTTCTCAACTGTCTCAAATGGGGAGAGTATAAAATTCAGGAGATCAAGCTTTTAACCTCTCTCTCAATCTCCTGGAAAATATGCAACAAAAGGATGTTAAGAAGTAGTAACTCGCAGTCTCGCTGCATAAAATAAGTCCTAGGTGTTGCCTGGACTTCATTTCACTCCACCACCCCATTATAATTATTTTGTGACACAAACTCAAGCCTGTGGGAAGATAAAAGAAATTGGGTTCGTCCTCTAAGTCTTATACCTGCTCGATCCCCTGCAGGACAACGCCCAGGAATAAGGTTAAGCCTGGGCAAAAGAATCCCGCCCATAATCGAGACTCGACATGGAGGCGATGACG EMBV3_30041 TGGAGGTAGAGATGATGGCCGACATGTACAACAGAATGACCAGCGCCTGCCACCGGAAGT Gene GeneID:512818|TIMM10:NM_001046132:19_cdna Constitutive 0 NULL GeneID:512818 15 GENE TIMM10 MGC137002 translocase of inner mitochondrial membrane 10 homolog (yeast) EMBV3_22559 TCGGATTGTTCCCGGCGGAACAACCTAGAGTCCGAGCAGTGTGGACAGGGAGGCTACACG Gene BVV0101_065370 + 0 NULL GK000009.2:77910586-77937301 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210234 TCONS_00115686 TCONS_00252353 TCONS_00129783 TCONS_00224113 TCONS_00007677 TCONS_00064812 TCONS_00252235 TCONS_00071186 TCONS_00116100 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00020157 TCONS_00220662 TCONS_00136620 TCONS_00222766 TCONS_00129573 TCONS_00242885 TCONS_00230724 TCONS_00207069 TCONS_00209846 TCONS_00129528 TCONS_00177370 TCONS_00175855 TCONS_00218945 TCONS_00008224 TCONS_00056146 TCONS_00249011 TCONS_00174963 TCONS_00109898 TCONS_00248864 TCONS_00039854 TCONS_00010053 TCONS_00107179 TCONS_00090421 TCONS_00131137 TCONS_00238933 TCONS_00021878 TCONS_00063181 TCONS_00009259 TCONS_00111497 TCONS_00233560 TCONS_00209636 TCONS_00071418 TCONS_00039226 TCONS_00178325 TCONS_00233372 TCONS_00161667 TCONS_00178427 TCONS_00107735 TCONS_00209032 TCONS_00085967 TCONS_00167561 TCONS_00063486 TCONS_00063080 TCONS_00199802 TCONS_00207755 TCONS_00200574 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00040740 TCONS_00251804 TCONS_00038932 TCONS_00115865 TCONS_00135686 TCONS_00064619 TCONS_00089437 TCONS_00161835 TCONS_00071033 TCONS_00020345 TCONS_00198813 TCONS_00054161 TCONS_00170823 TCONS_00122313 TCONS_00020023 TCONS_00223554 TCONS_00251907 TCONS_00211316 TCONS_00107832 TCONS_00222114 TCONS_00199037 TCONS_00110403 TCONS_00122686 TCONS_00161123 TCONS_00111731 TCONS_00166449 TCONS_00157036 TCONS_00031910 90 XLOC_128744 XLOC_069855 XLOC_155294 XLOC_078496 XLOC_137409 XLOC_003238 XLOC_039536 XLOC_155176 XLOC_042958 XLOC_070269 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_010835 XLOC_133979 XLOC_082831 XLOC_136073 XLOC_078286 XLOC_149548 XLOC_140214 XLOC_125588 XLOC_128357 XLOC_078241 XLOC_107144 XLOC_105634 XLOC_132264 XLOC_003782 XLOC_033949 XLOC_151954 XLOC_104746 XLOC_065802 XLOC_151807 XLOC_023671 XLOC_005605 XLOC_063090 XLOC_055202 XLOC_079842 XLOC_145599 XLOC_012551 XLOC_037908 XLOC_004815 XLOC_067397 XLOC_143042 XLOC_128147 XLOC_043189 XLOC_023044 XLOC_108098 XLOC_142854 XLOC_098554 XLOC_108200 XLOC_063645 XLOC_127543 XLOC_052005 XLOC_102397 XLOC_038213 XLOC_037807 XLOC_121454 XLOC_126270 XLOC_122226 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_024554 XLOC_154745 XLOC_022752 XLOC_070034 XLOC_081909 XLOC_039343 XLOC_054222 XLOC_098720 XLOC_042806 XLOC_011022 XLOC_120466 XLOC_031970 XLOC_103665 XLOC_073868 XLOC_010701 XLOC_136854 XLOC_154848 XLOC_129826 XLOC_063742 XLOC_135423 XLOC_120690 XLOC_066307 XLOC_074241 XLOC_098015 XLOC_067631 XLOC_101287 XLOC_095496 XLOC_018155 Coding TCONS_00233560 XLOC_143042 NonCoding NonCoding - 8:92837961-92838349 - TSS175064 388 1 TCONS_00233560_1 87 1.00257731958763 1 0 0 6.47449892410887e-06 1.45753048573501e-05 2.14024172268101e-05 1.06039044869753e-06 1.02436013452191e-06 0 6.24283151548598e-06 1.17319659146115e-05 8.83699995848118e-06 5.89995753792029e-06 9.61796768479136e-06 5.54631235203282e-06 4.45978395891205e-06 1.502533153669e-05 0.000192867842721031 0.0856848692931864 0.000875165884924454 9.24088388757177e-06 1.15841318822913e-06 1.30400914292684e-06 9.09073043177422e-05 6.33333360973377e-06 0.000103798968979324 0 4.8422483223872e-05 5.37684084509171e-06 1.48533757374075e-05 3.22925558412209e-05 5.89741173966195e-05 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-25 120 81.45 0.31701030927835 0 noncoding AAGCTTGTGTCGGTGTTCTGATGGGTGGAGCTGTATTTCTTCTCTTTGTTCAGTCGCGCTGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCGCAGTGCCTCAGCCACACTGGGTCTGCCCCCGCTCACGGCGCATGTAGCCTCCCTGCCCACACTGCTCGGGCTCTAGGTTGTTCTGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGTACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGAGTTTTGTGCTCTTCCCAGGTCTGAGCAGCTCAAGTGATGAGGTGTTTGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCAC TCONS_00228645 . 5' 8495 TCONS_00228645 . 5' 8495 EMBV3_28616 CCGCCGGCCACACGAGAGAAGCGTTTTTGGAATAACGTATTATTGCAGAGTTGGGCTGAT Gene BVV0102_198711 + 0 NULL GK000017.2:68362111-68368660 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076087 1 XLOC_046728 Coding TCONS_00076087 XLOC_046728 Coding Coding ASPHD2 17:68354332-68363383 = TSS57196 2714 1 TCONS_00076087_1 343 3 0.700441988950276 0.00023060491448156 8.51562794077282e-05 0.000371660295680125 0.000388587561606917 0.000216479712816145 0.000123891782206184 0.000143966314789285 0.000178705415309154 0.00023257567845063 1.06122110688066e-05 4.30172234811197e-05 5.53346899691373e-05 0.000159639673345499 5.19970146408291e-06 3.82637854763146e-06 0.000272484790463155 0 0.000434514428037364 0.000335558609790576 0.000278223364167361 0.000310955611315299 2.18737404965533e-05 0.000101407988408387 0.000895679050346421 0.000395694989450066 5.71113748269358e-05 0.000239633111077232 2.12347308475652e-05 1.07323806769798e-05 4.20901063733868e-05 XM_002694618.3 ASPHD2 PREDICTED: Bos taurus aspartate beta-hydroxylase domain containing 2 (ASPHD2), mRNA. 0.0 4895 100.00 0.999631540162122 NM_020437.4 ASPHD2 Homo sapiens aspartate beta-hydroxylase domain containing 2 (ASPHD2), mRNA. 0.0 1862 76.74 0.900147383935151 TCONS_00076087_1 sp|Q6ICH7|ASPH2_HUMAN ASPH2_HUMAN Aspartate beta-hydroxylase domain-containing protein 2; 0.0 673 91.84 0.997084548104956 1 coding 0 0 0 0 -1.96311250763165 0.000881608674971202 -0.0158405158172335 0.779771698829788 ATGTCGCTCGAGTGGCTGGTGGCCTGGGGCTGGTCGCTGGATGGCCTGAGGGACTGCATCGCCGCCGGCATCCAGTCGGTGCGGGACTGCGACACCACGGCGGCGGTCAGCGTGGCCTGCCTGCTGGCCCTGTTCGTGTGGTACTGTTACCACGTGGGCCGCGAGCAGCCCCGGGCCTACGCCTCGGTCAACGCCCTGATGCAGGGCCCCGACGCGGCGGGGCTGCAGAACGGCTTCGTGTACTGCCAGTCGGCCGAGTGCGTGCGCTGCAGCCACAGCGAGGGCCTCAACCAGAAGCTCTACCACAACCTGCAGGAGTACGCCAAGCGCTACTCGTGGTCCGGCATGGGCCGCATCCACAAGGGCATCCGCGAGCAGGGCCGCTACCTCAGTAGCCGGCCGTCCATCCAGAAGCCCGAGGTCTTCTTCCTGCCCGACCTGCCCACCGCGCCCTACTTCTCGCGGGAGGCCCAGAAGCACGACGTGGAGCTGCTGGAGCGCAACTTCCAGACCATCCTGTGCGAGTTCGAGACCCTGTACAAAGCCTTCTCAAACTGCAGCCTCCCGCAGGGCTGGAAGATGAACAGCACCCCCAGCGGGGAGTGGGTCACCTTTTACTTGGTCAACCAGGGGGTCTGCGTCCCCCGGAACTGCAGGAAGTGCCCACGGACGTACCGCTTGCTGGGAAGCCTTCGGACCTGTATTGGCAACAATGTTTTTGGGAACGCGTGCCTCTCCGTGCTGAGCCCCGGCACCGTCATCACGGAGCACTACGGCCCCACCAACATCCGCGTCCGGTGCCATTTAGGTCTGAAAACTCCAAGCGGCTGTGAACTGGTTGTGGGAGGGGAGCCCCAGTGCTGGGCAGAAGGTCGCTGCCTCCTCTTCGATGATTCCTTCCTGCACACCGCGTTCCATGAAGGTCCGGCGGAGGACGGCCCGCGGGCGGTTTTCATGGTGGATCTGTGGCACCCACATGTCGCGGCGGCCGAGCGGCAGGCCCTGGATTTCATCTTTGCTCCAGGACGATGAGGACGTTGGTTGCGCTGGAGTCGCCAGGAGAGACAGTGGGTCTGCCTGGGCAGACGGGGGTGCGGCCCAACCCCCTGGCCCTGTTTGGACCCCATGCTCAGAAACCTGCCTCAACCGAGAGCTCGCATTTGGGACTTTTGTTTTTTAAGATCACATTGGGTCCCTTTTTCCTTTGGTTATTGAACAATAGGGAATTTCCAGCTTGTATTTCCTTAGATTTTTTTCTCCCTTCCCATCGTTTGCTTCTGCAATTCCTTTCTGCCTAAAAGCGTGTTCCTTTGCTCTACGACGAGACCCGGTGTCCCTGTCGTCTGGTTTCACGCGCGCTGCTACTTGGTCTTGTTAGTGCTCTGAAGTAGAGTCGCCAAACGGTTACTTGTCTGAATGTAATAACGTAAATCTTCTTGTGGTCATCTTAAGAGGAAAAAAAACACACAAAAAAACAACCAAAAAACTGCAAAGCAGAGAGCTGGCGAACACAGCCTCTACTGCTGTTACAGTCACCAGGGGGCCCTTCTGCTGCCCCGGGGCAGGGGGCAGTCTGCGGCCAGCATCGCCACCCAGCCCCGGCCGGCTCCGGCGTTGGCAGGGTGGCCCTGGTCAGGGGCAGGGCCAACCCACCATCGCTCATCTCACCCCGAGCCCCGTGAGTTCGCTCACGGCAAGAGCCTTGGGCTGGCGGGACCAGAGGTTTCTCTGTAAACGTGGCTTTCCGAACAGAGCCAGGGTTGGCGTCTTCTCTTTCGAGAGCCCAGCCGGGGCTCCCTCAGATCAGCCTCTGAACATGTGATTCGCTTACCTCACTGCCTACAGAAGCCCTACTGCCAAACCGGGCCCGGGAGGTTCCCCGCTTGAGCTGTGTGGAGTCCACGGCGCTGAGCGTTCAGACCACCAGGCTGGCCCATGGGCGCCAAGGTGGGGCAAGCAAGGCCTCCCTCCTCCAGGGACGTTCTGGAAAAGCCTTTATCTGGCAAAACTGGGAATCGTAGGTCCGCCTAGGACATGTCTGTTTTTTGCTTTGGAGTTCTGCTGCCTGTGATTTTCCATTTGTCTGTCTGTACATAAACGTTCAAACGCTGGGCTCAGAGATCATACTGGGGTCAGCCTGTGCCTGTCACTGCACAAGGGTGTGGCCCTGGCCCCCTCAAGCCAGCGTGTGCTCGTGAGGACGCTGGGCGACCTGCAGACCCAAAGAGCCCACAGCCTCAGCCCTGGCTTGTTGGTCTCCTGTGAAGGACATGGCTGGGTTCTGGCGCCAAGTCTGGAAATGGCCCATGTCAGCCGATGTGTAAAGGAGTCGCCGCCGGCCACACGAGAGAAGCGTTTTTGGAATAACGTATTATTGCAGAGTTGGGCTGATAAAGCCATGGAGCGGCATGGAACACAGTTTGTCCCGTGTCCGGGTCCAGCGTGAAGAAACCGTGTCTGCATTTGAGTACACTTTCTACACATCTTTTTCAGCGATTAGGATGCAGGAAAGGGCAGAGATTTCTGCCCCACCCGAAGTCTTTCTTCTTCTCCTCCAGTTTCTTGTCAAAGAGTCACTGAGGTGCATGATCTGTCTGCATCCTGACTGCTGTCCGTCTACAAAGCCGGCAGCCCACACCCATCCCCAGCTGCCTGTGCTCCTGTGACGTGGCTGGGGACCAGGAGGTAAATAAAAGATCTTGCTGAAAACCAGA EMBV3_06154 ACATGTATATTGATATAACTATCACTTACAGAATATAAAGTATCCAAAATTCAGAATACT Gene GeneID:510525|MGC128929:NM_001034386:82_cdna Constitutive 2 NULL GeneID:510525 10 GENE MGC128929 NULL proline racemase-like EMBV3_05126 GTTACCTGCTCATATGTTTACAAGTCAATGTGATAAAACAATGCATTTCAACACTTACTG Gene BVT0102_060273 + 0 NULL GK000030.2:55948039-56005897 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244458 TCONS_00244454 TCONS_00244457 TCONS_00244453 TCONS_00244461 TCONS_00244455 TCONS_00244452 TCONS_00244456 TCONS_00244459 1 XLOC_150465 Coding TCONS_00244458 XLOC_150465 Coding Coding LOC520706 X:55927389-55949744 j TSS183724 3223 1 TCONS_00244458_1 468 0.0611231771641328 4 0.855998926366646 0 0 0 7.49974237636884e-12 2.46802074204335e-10 0 0 0 4.16232687748564e-10 2.91810900522058e-20 3.55048691757599e-10 1.26450270523941e-06 8.4754529442595e-10 3.9927102107645e-05 7.41149006984869e-08 0.000947668430892748 1.35733026996463e-112 0.000245317996039207 0 0 0 0.000748578250705191 0.000817266322905279 0.000791172587315504 0 0 0 6.42381324387456e-09 2.08202863978603e-05 0.000268598812377172 XM_598956.3 LOC520706 PREDICTED: Bos taurus preferentially expressed antigen in melanoma-like (LOC520706), mRNA. 0.0 3582 100.00 0.615885820663978 XM_885719.2 Pramel PREDICTED: Mus musculus preferentially expressed antigen in melanoma-like (Pramel), mRNA. 1e-144 518 68.99 0.425380080670183 TCONS_00244458_1 sp|P78395|PRAME_HUMAN PRAME_HUMAN Melanoma antigen preferentially expressed in tumors; 4e-60 208 33.97 0.97008547008547 1 coding 0 0 0 0 -0.0944854108900772 0.54244060712007 -0.0383094807636883 0.509634822145793 GCTGCGGCTTGTTGGCAGCGGCCTGTGGAGAGGGAGGGACGCGCTGCCACTGCTCGGGTCTTGGACGTCTCGACTGTTTTCCGACTCTTCTTCCAGTCAGGTTTGTGAAGATGGACCAAAAGATCACAGCCACACTCTTCGAGCTTGCTGCAAAGAGTCTGCTGAGTAGTGAGCCTATAGTGATGCATGCTCTGGAGAAAATCCCAGGAGGTCTCTTTGTTCCATTGTTCAGCACTGCCTTCTTGGGTGGGCATAAGAAGATCCTAAAGGCAATGGTGAGGGTCTGGCCTTTTCACTGTCTCCATCTTGGGTCACTGAAGACACAGGAGTCATACTATGACATCTTGGAAGCCATGATTGATGGTCTGCCAATCCCCCCAGCCCAGAACTCTTCCTCTAGGGGCCACAAACTGAGGATCCTAGATTTAAGGCACAGGTCAAACTGTAAGATAACATGCTCTCACGTCAGGATCACATTCCCTTTCTGTTTACAGTCATGCAAATACTCTCGGCATGCTGTCCGTAACTTAGAAAACACTCAGCATCGTGCCAGGTGCCTTGAGATTGGTAATTCTGGGTCTGAGGTTGAGTCAGCTCAGGAAACCATGGAATTACTAGTGAATATTTCCCTCAGTAATACCTTGAGAGCACAGCAGTTTCTCACTTTCCTCTGTAATAAAGTTGAGCAGAGTTCTGGGTTCTTGCACCTCTGCTGCAGAGATTTGCGAATCAATAGAATGTCTACCAACAGACATATCCTTCAGATTCTGGATCTGGGGTGCATTAATCATCTGGAAATGGATCAGGCTTTTCTGAATGAGATCATCACCCTTTTTGCTGGAATGATCCACCTGCACAGCCTTAGTTTGTCTAACATCCCCTTTAGGTCTTATAAGGGAAGGAATTTCAGGTTTTTTCTCATCCTGCTTGGGCAGCTGGAAAACCTCCAGGAGCTCAGGTTGTCTTTCTTCTACCTCAGAGATCAACTGCACAAACTGCTCAGAGTCCTGCCACCTCATATGGATGCATTGTGTCTCCCTTTCTGTGGCCTTTCTATCAGAGATGTCTCTTTCCTGTCCCAGAGCTCTCAGGCCACCCAGCTCAGGGTATTGAATCTCAATAACAATAATTTCTTTTCAGAAGCTTATGAGCCCTTCCAGGCTCTGCTGGAAAAGGTTTCAGGCACCATACAACGTCTGGAGATAAATAATTGTATGATGACTGATTCTACTCTCTTGGCCATCATCCCAACCCTGAACCAATGTGTCCACCTTCGTGTTTTTAACTTTGCCTTCAACCCCATTACGATGCCTGTGCTCAAGAGCCTTCTGCAGCGCTTGACATCCTTACCGAGGCTGAGGCATGTGATTTATCCTGTTCCTGTCCATTGTTACCAGGAGCAGAATTTTTATCACAGCTTGAACCGACAGAAACTTGCCGAAGTTCAGGCCCAGGTCAAGGCGATGCTGCACATGTTACACCAGGATCACGTGCAATGGGCCACTTATTCTGATTGATTTCCACTATATAAGAAGTGTTTCACCACTGATGCATGGCTGTTAAGTGTTCATAGTTTTGCCTGAAGCCCAAGTTTGTAGAGATACATATACAAAGTTCTACTGTTCCAGAAAACAGGTTTAAGAATGTTGGATATGTAACTGACCTCTATAAAAGAGAAACTTTAAAAAGGAAATAGAGGAATTTGAAAGGTCCTCTGGATCTCTTGTTCACTGCCCTCTACATCTTCTTCTCATTACTAACCAAGTTATGGCTATGTGATATAAGCTGACTGAGGCATAATATATCATATCATTTTCTTCTCCACACTGATTGGTCCATTTATCAATCTATGGGCACTTGACACAATTCAGATCTGTTGAAACTCTTCCTAGAGGTGGTAGTTGTTGAGTAATTTTGCCCTCTAGGTACCTGCAAATTTCCTCTGTTTCTGATTCGCTCAGGTTGTTTATCAGGACACATACGCAGGTAAAAAGAAACAGACTATGCCCACTACCTAGTGGTACCTTCATCAGCATGTTACTGCCTGATTTCTCAGGTCTCAGAACCCTGGCTTTGTTATTGGCTATTTCACACACATTCACCAAGTATCTGTTATGATTTAGGTACTTTTCCACATGTTAAAAAAAAAAAAAGTCCCTGATCTCACCAAAGTGTAGATACTCCTATTGTTTACTAGTTTGTCTGTTTTCCCTAGAGCACTTGAGAACTTATTTATCCCCCATAAACCTCCCCCCCCGCTTTTTTTTGCATTTTCCCTTACATGATTGGCTCAAATGATATTGGCCTCTTTTGTCCTGTTGGATAGCTGCTCAGTCCTCACATCATGGCTTGAATGTTACCTCATCAGATAGGTTTTCTGTTGTCTCTTATTTCCCCATTTAAGTAGATTTATTCTGATGTTTCTTTGTCTTAATGTACCATGTACAGTTCCTTCATGGTACACATTGTTCCATATGTATTTATTCTGTCTGCTCTTCCACTAGAGTTGCACTGTTCAGTATGGTGCACACTAACCATATGTGAATATTGAAGTCTAGAAATTTGGCTATTCTCGAATGTGATGTACCCTAAGTGTTAAATGCACACTGTGTATCCAAGAGTTAATAAGAAACAAAAGATGTAGAATAACTGATTAATCATTTATGTATACTGTTTACATGTTGAAATGATAACATACTGCATATCAAAAACAGTAAAGATAAGAGAATGTAAATTCTTTATATTGTTATATGTTAAAATGATAGCATTGTATTTCAAAGAATTAGTAAGAAAAATGTTAAAGTAGTTACCTGCTCATATGTTTACAAGTCAATGTGATAAAACAATGCATTTCAACACTTACTGAGAACAAATACCGTTAATTAATAGATTGTTCCTAGTGTTTATATGTTGAAAGGGTAACACAGAAAATATCAACAATTTGGTAACAAAAAAAGAATAGAAAAATAATTAGTAGTTTGTGTATGGTGTTTCCTTGTTTAAATGAAAACAGATTGTATTTTAAAGACTTAGTAAGAAAGAAAAATGTAATAGTAATTAATGATGTGTTCATTGTTTCCACGTTGAAGTAATAAAACAATTTTTTAAATTCAGTAAAAAAATTTATTTTTCCTACATGTTGAAATGATAAACCATTTCAAAGACTTGAGAAAATATAAAAATTAATTCATAATTAATAAAAATAGTGAATAGCTTGTTCCTA EMBV3_34342 GGACGTCCGCCGGCGCTTAAGTGATGTGATTAATCGAATTCGCGCGGCCGCCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_19114 GCACCTCCACCTCCTCAGTTCCTAGCTCTGAACATTGAAGTCATCGTTGTCTCCTTTCGT Gene BVT0102_277719 + 0 NULL GK000007.2:46038732-46064178 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220864 1 XLOC_134181 NonCoding TCONS_00220864 XLOC_134181 NonCoding NonCoding - 7:46041005-46042041 - TSS164862 1036 2 TCONS_00220864_2 79 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00130018301723596 0 2.4219032493078e-05 0 0 0 0.000207721396130884 0.000752696327826553 0.000194185017368995 0 0 0 1.85428111023626e-05 0 0 XM_005209308.1 SHROOM1 PREDICTED: Bos taurus shroom family member 1 (SHROOM1), transcript 0.0 1869 100.00 0.999034749034749 XM_005272154.1 LOC101928192 PREDICTED: Homo sapiens protein PRRC2A-like (LOC101928192), mRNA. 9e-46 188 66.32 0.684362934362934 0 noncoding 0 0 0 0 -0.306331910881305 0.0870920471886442 -0.175435050951743 0.0122377064020742 GAGCACCCGATACCCATGCAAGATAGGGTAGGAGAGTCCAGCTCCTTTAGTGTGTTTTGGGGCCTCAGCCCAAAGAGCAGAGAGTTTTTGTCTGGCTGCAGGGAGCCTCTTGCAGTCCAACCATCCTCTGTGGCTGGGAGTGGCCACACCCCAGGAGCCCTAGAGTCAGCACTAATGTCAGCTGTGGGCTGGGCTGCAGAGCCAATGCCTGCATTGAATATAAGTCAGAACTAAAGCTTTCTCAAGCCCCATCAGCCCAGGGGGAGCAGCATGTTATCCTGGAAAACCGCTAGATTAGGTAGGGTCATATGGTATTGGCATTGTTTGCAATAAACATCACCTGAATCAAAGAGCAAGAGACGAAAAGGAGACAACGATGACTTCAATGTTCAGAGCTAGGAACTGAGGAGGTGGAGGTGCCGGTGTCAGGAATGAGGAAGCTGGGATGCGGACTGGCCAAGGGTTCCAGGCCGGGTCTGGGGCCTGTGGACTTTGCAGTGTTTGTGGCAAGTCTGGTGAGCAGTTGAGTAGGTTGAGATGTGAGTCTGGACCTCAGCAGAGAGGTTGGACCAGGCAAGCAGACAGACCCAGGCTTTTAGTTAGAGGTTCTTGGGGAAACCGATGGAGACTGCTTCCAGTGACTAAAGTCACACAAAGGCAACAGAAACAGATCCAGGTAAAGTGACCAGAAAGACAGACAACCTCAAATGATCAATAAGGATCAGGAATTAAATCATATCTAGGATGGTCTTTCTCAGTGGTAGGCTTACTGTAGGGTGTTGCCTCCATGTCACCCAGACTGAGTTTCTGGGTCCTGGGCCTGTCTTGAATCCCAGCTCTCCAGACACAGTCTGGAAGAGCAGGCATTAGGGGGAAGTTCCATGGCTCTCTCAGCCCCCTACGGCTCCCCATTCTCCAAGCCTGTCCGCCCCACAACGCACCCTGCGAAGCATCTGCTCTCCACTGCTGCCGCCCTCCCGTAGAGTCTCCATAGGCTCTAGCTCCGTGCCGCGGGCAGGAAACGAGGGATGCTAGG TCONS_00216874 TCONS_00216875 . 5' 2275 TCONS_00216874 TCONS_00216875 . 5' 2275 EMBV3_07377 AAGGTTCCTAGACTATGCTGGACCCATTAGAGCTTCAAGAGTGGCAAAATTTCCTCAAGG Gene BVT0102_325168 + 0 NULL GK000010.2:63633052-63967088 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014372 TCONS_00014369 TCONS_00014371 TCONS_00014368 TCONS_00014370 1 XLOC_008286 NonCoding TCONS_00014369 XLOC_008286 NonCoding NonCoding - 10:63546803-63921877 - TSS10393 420 1 TCONS_00014369_1 69 4 0.998890882574859 0.000726959597906156 0.000945030570368374 7.04025749592021e-05 0.000474522975886448 6.0266703589912e-05 3.17388989996649e-05 3.58963609326039e-38 0.000318342133242609 5.66760473908737e-28 4.89818014178078e-05 0 0 0 0 0 0 0 0 5.6750197326179e-18 2.17975936877233e-250 0 0 0 0 2.41068233391748e-12 1.31603888787689e-11 0.000178253530683969 0 0 0 XR_226911.1 LOC101902195 PREDICTED: Bos taurus uncharacterized LOC101902195 (LOC101902195), 1e-52 210 100.00 0.273809523809524 0 noncoding ATTGATAGCGTCTCCAGGTGCAACCGGCACTTGTGCTCTCTCGACGCAGCTATGACCGCTTCCCTGTGAAGGCCGTGTGAGCGTCCCGCCGCCACGACGACTTGGTCTTGGCACCCGAAGTCCTGTGGTCCTTGGTCGGTGTCTACAAGTGCGAATCCCTATCTTCTGAGCTCTGAGTCAGGTTCCTAGACTATGCTGGACCCATTAGAGCTTCAAGAGTGGCAAAATTTCTTCAAGGATCTCTGGAGAATTTGGAGTTCTAGATACATGGATCAACTCTTTCCCTCCATAGAGGGCCTTCAACCAGTGGTGAGGTCACATTGGGAGCCCTGCCCACCTGCACATCCCAGATGTGAAGACTGTGACTCCTGGAGGATGATATCAGAGTCATTTATTGGATGACACCAAGAACTGAACCAG TCONS_00017520 TCONS_00017521 TCONS_00017522 r 5' 626144 TCONS_00017520 TCONS_00017521 TCONS_00017522 r 5' 626144 EMBV3_27439 CCCTCCTGAGGAACCCAACACGTGTGACATCAAGAGTACGGATAGTTTGCCTTCTGGTAA Gene GeneID:510916|DBF4:NM_001075476:14_cdna Constitutive 1 NULL GeneID:510916 4 GENE DBF4 MGC139071 DBF4 homolog (S. cerevisiae) EMBV3_24984 GCTGGTCACTGCAGGACATTGGAATAACTGTGGATACTGTACTCAACGTGGAAGAGAAGG Gene GeneID:509646|UBXN8:NM_001038672:10_cdna Constitutive 0 NULL GeneID:509646 27 GENE UBXN8 MGC133922 UBXD6 UBX domain protein 8 EMBV3_16543 ATTTGAAGACGCTGGTTTTGACTCATCTTTATTTTCCTAGCTTACCCTTCCCCCGTCCCC Gene GeneID:505133|UBE2Q1:XM_002685993:341_cdna Constitutive 1 NULL GeneID:505133 3 GENE UBE2Q1 NULL ubiquitin-conjugating enzyme E2Q family member 1 EMBV3_21061 CCTCCTTGGTCCTGCTCGGGGACAGAGAAGACGATAGACATGGAGGAGAAAAACAATGAA Gene GeneID:507205|DCLK3:XR_084024:412_cdna Constitutive 0 NULL GeneID:507205 22 PSEUDO DCLK3 NULL similar to CLICK-I,II-related protein EMBV3_00387 GTTGCCATAATGACACCCGGCTTCACCTGAAGTTAGCTATTCTCGAGTCTAGAGATAACC Gene BVT0102_369784 + 0 NULL GK000026.2:41029954-41212405 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048544 TCONS_00040888 TCONS_00248730 TCONS_00176420 TCONS_00091433 TCONS_00135546 TCONS_00166151 TCONS_00196835 8 XLOC_028676 XLOC_024702 XLOC_151675 XLOC_106198 XLOC_056208 XLOC_081769 XLOC_100989 XLOC_118500 Coding TCONS_00176420 XLOC_106198 Coding Coding - 3:27835142-27838137 - TSS131179 2995 1 TCONS_00176420_1 220 0.662103505843072 1 0 0.000212464652318034 4.41214786253995e-05 0.000294520348049319 9.06354956150964e-05 0.000130007202169624 6.64670900942307e-05 0.000153230929659697 0.000149024885931248 0.000212671091810386 0.000529092603261376 0.000251946299183444 0.000142542402899036 5.59493434909063e-05 0.000145331062414462 7.25534635466934e-05 0.00462420658490356 0.00162493284725778 0.00308280267222375 6.72162876247128e-05 3.35867970164503e-05 5.46092387333842e-05 0.00222048730026893 0.00164272209567678 0.00258484289763722 0.000151801000097885 9.92320180725139e-05 0.000102879106272485 0.00107808477554802 0.000812237043566124 0.0015482857533564 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 9e-153 545 91.64 0.126544240400668 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 9e-39 167 67.64 0.171619365609349 TCONS_00176420_1 sp|Q09575|YRD6_CAEEL YRD6_CAEEL Uncharacterized protein K02A2.6; 3e-10 60.5 28.49 0.818181818181818 1 coding 1 1 1 1 -0.0266553221340545 0.827777091815887 0.0149542376578926 0.77621279892908 AATCTGGATTACAATGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGATTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCACCTTTAAAGCTGCTGTAACTCAGGGGGTATCTAAAGCTCTAGGAGTAGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGCTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAGCTACCCCCAAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCCGGGAGACAACTCCTGACCCAGCCTCCAAGACAAGCAAGCCTCTATTTGAGCCAGGAACCGAGCTGTCAAAGTGTCAGGAGTTGATTCGTGGGTACATCATACTTGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTATCTATGCTCTGACTTTGTACCTTTTAGATGAGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCTTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCGGAGCGCTCCCCTCTTCGTCAGTGGAAAGCTTCCCGTGGTGGACATCCCCACTTCAAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCAACAACAATCACATGCGATGCCTCTTCATCTGATAACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGTCTCGGTTCAATGACGATTTTGCTACATATAAGGTAAATAGGTCTAGATCTAATGGCTTTTTACCTGACGTTTATCAAATATGAGATGAGATTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCATCCCCCAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCGCTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGGTATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCACGGCGTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACCAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAGATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAAGGAGGAACTTGTGCCATTATTCATACCCAGTGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGATACTCCTGAAGCCTCAATTGCCTCATTTGGGAGACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGAATTTGTTTCTAGCCGCATGAAAGCTTTTAAGTTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGATTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCAGAAGTAGTTATGGAATGAAAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTCATCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATAATGACACCTGGTTTCACCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTCCGTCTTAAGCTATGCTAATGTACTACACCTTTACCCCAAACTCTGTCTCCAAGTCGGTTCCGCCTCTTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACCATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTCTATGGCCCAGGATAAACCATTTGGTGCCAAGATTATCCCAAAATGCATCTTATGGGTGAGGGCCTGGTGCCATTCTGAATTTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTATATAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTAC TCONS_00172700 TCONS_00172701 . 5' 40591 TCONS_00172700 TCONS_00172701 . 5' 40591 EMBV3_02494 GGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCGGGTC Gene BVT0102_308570 + 1 EMBV3_33982 GK000007.2:51521516-51683086 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00102424 TCONS_00169477 TCONS_00078983 TCONS_00171161 TCONS_00013240 TCONS_00013237 TCONS_00132043 TCONS_00243948 TCONS_00098385 TCONS_00088693 TCONS_00031871 TCONS_00252294 TCONS_00154811 TCONS_00253149 TCONS_00169479 TCONS_00140493 TCONS_00174545 TCONS_00105301 TCONS_00199297 TCONS_00025106 TCONS_00025108 TCONS_00187773 TCONS_00226267 TCONS_00230483 TCONS_00029929 TCONS_00252175 TCONS_00174542 TCONS_00243949 TCONS_00172905 TCONS_00202431 TCONS_00174541 TCONS_00207061 TCONS_00056222 TCONS_00187484 TCONS_00222044 TCONS_00132257 TCONS_00135546 TCONS_00169478 TCONS_00013239 TCONS_00174540 TCONS_00161897 TCONS_00174543 TCONS_00211235 TCONS_00187309 TCONS_00226268 TCONS_00154809 TCONS_00115444 TCONS_00039773 TCONS_00042246 TCONS_00117782 TCONS_00171162 TCONS_00154810 TCONS_00132044 TCONS_00013238 TCONS_00102423 TCONS_00174544 TCONS_00174546 TCONS_00031828 TCONS_00202430 TCONS_00110376 TCONS_00238548 TCONS_00154812 41 XLOC_085141 XLOC_061863 XLOC_103372 XLOC_047868 XLOC_103753 XLOC_008038 XLOC_080693 XLOC_150314 XLOC_058631 XLOC_053479 XLOC_018116 XLOC_155235 XLOC_094549 XLOC_156090 XLOC_104638 XLOC_062534 XLOC_120950 XLOC_014669 XLOC_113817 XLOC_137960 XLOC_139973 XLOC_016184 XLOC_155116 XLOC_104243 XLOC_123974 XLOC_125580 XLOC_034025 XLOC_113529 XLOC_135353 XLOC_080738 XLOC_081769 XLOC_098782 XLOC_129745 XLOC_113357 XLOC_069614 XLOC_023590 XLOC_025624 XLOC_071948 XLOC_018073 XLOC_066280 XLOC_145215 Coding TCONS_00088693 XLOC_053479 Coding Coding - 18:16253891-16262851 - TSS66039 8960 3 TCONS_00088693_16 322 0.833816964285714 1 0 1.16138100847541e-05 7.96429858026615e-06 3.07256028026004e-06 4.42709753766115e-06 5.69941641360114e-06 9.36986144176691e-06 4.17213544200926e-06 7.63046551528769e-06 8.58928521701181e-06 0.00301046678642136 0.00239831088605626 0.0015763669782467 0.000227177578259478 0.00108690726800688 0.000384144385590756 0.000790121063971953 0.000515956829006995 0.000826027671964117 4.3811848144521e-06 3.31201459449274e-06 1.09063433137715e-06 0.000992635426179298 0.00198119839159111 0.00142769773920594 7.68687460946034e-06 8.69637334773621e-07 3.2494649242946e-06 0.00389999415994786 0.00174588384334866 0.00262377460897209 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2360 89.00 0.197767857142857 TCONS_00088693_12 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 4e-25 107 34.00 0.878228782287823 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 TTAAGTAGGCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATACAAAAGGAGGAGCCAAAGCGTTTTCTCTCGGACTCTCTCTCCCGCGTGCGTGCGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACATGGTTTGTCCAAGACCCGAGAGCTGTGATGTGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAAACAAAGAACCGAGGAACATACACTCGCGTGACATCTATGGTGCCGTGACTCGGATATAACCTGGCTGAAACAACCTCTGCATGGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGTGAAGCTCCCGCGCTAGAAGCGAAAGGTGAAGAAACTCAGTGCAGGGGAAGGCCCATCGTGCTGGAAACCGGGACAACGAAAACCGAACTCAGCACAAAGCTCACGCGGCCCAGTCTCAGATTCCAGAAGACCTCCAGTTAAGGTAAGAGGTCCTCGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCTTTCTTGTTTCCTCAAACCTCCCGCGAACAGGCGGGCAGCAGGGGCACAACTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACCCAAGCTGGTGGGGGTTCTTCTGTCCTTTCTCTTCTCTGTGCCAAAGATCAGACCAATGAAACTGTGAGCACCGGTCAGATATTTAGCAAATTTTCCGGCGGGCTATGAAGGGGATTCCTTGGCATGTTTTTCCCACTGCTTTTTCCTCTTGTCCTTCAGCTCTCTCCCGGGACTCAAGCCCAGCCAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAGATTTGTTAGGATCCAGAGAGAAGTCACCCTTCGGGGTATGAACCATTGCCGAGGGCAAGGGCTTCGGCCATGGTATTAGGCCTGGCTAGGTTTTGTGAGGGAATGGAATTCATATGCTAATGAGTGAGAGGATAATCCCAGCCATTGGGGAACCACCCATCCTCCCTCTTTTACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTGGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTCACTTGAAGTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACATTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCCCTTCCCTCCTGTTTTGTGCTCTTTTCCTAAGCCCCATCCAGACCCACAAGGTTGCCTCTACAATCTTCTGAAGAGACAATCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCTAATCCTACCCAATACTGGTCACATTGGAGATCTTGGGGACGCCCAAACTCCAGTCCCGGGGGTCCCAGGAGGTCATCACGCCTTGACTTGCCTAGGGATCGGTCTTCGAGAGGTTGTCACGCCTCAACCTGTTTGGGGATCCTCTAGTCCCAGGGGTCCCAGGAGGTCATCACGCCTCGACCTGCCCAGGGACCCAATCCTCAGGAGGCTGTCACACCTCAACCTGCCCGGGGATTCGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTGCACCCTGACCCAGGGACGCCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAGAAAGACTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAGCCTATTACTTGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCCATTGCCTTTCTGGAGAGGCTAAAAGAGGCGCTCCAAAAGTTTACCAACCTGGACTTAGACTCTTACGAGGGACGGGTGATTTTAAAGGACAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAGAAAGAAAGAGACAAGGCATGCCCAGATGCTGGCTGCCCTCCAGAGAAGCCCTATGGCAAACCCCGAGTCCTTGAGGGACAAGGCACGAGACAGATGCCTGATCTGTAGACAGGCGGGGTATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATCGGGCGACACTCTGCCCCCGGGACCCAAGAGCCTCAAGGTCAAGTGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGCAGCCCGCTCCAGCCAGCCCGCCTGTCACAGATAACCATCACGGGGCTGGAGCCAAGGGTGCAACTGGATGTGGCAGGTAGGTCTGAGAATTTCTTGATTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCAAAACCTGTACCATTTTGGGTGCTACACGAAAAGCAACTACTAAAAGATTCACCCGAGCACTTCTTTGTTGCTGGGATGGACAAATATTTTCCCACCAGTTTATGGTGGTCCCTGAGTGTCCTACCCCCTTATTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAACCCATTACACCTTCAATAGAGAGGGACCAAAAACTATGGGAAGACAAAATCAACCCCCAGGTGCTGGACGAGCCCACCGAGCTGAACCGGTCATCATTGTCCTCCGAGATCCCACTCGATTTCCTAATTGGAAACAATATCCTCTCAAAAGAGAGGCTCGGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGCTTGCGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCCCAGTAAAGAAAAAAGACGGAACCTGGCGAATGGTCCAAGATCTCCAGATCATAAATGAAAATGTAGTCCCCCTCCATCCCACAGTACCCAATCCCTATGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACCACTGACTAAAGAATCCCAATACCTTTTTGCCTTTGAGTGGGAGGCCCCAGGAGAAAAAAACCAACAGATGACTTGGACAGTATTACCTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGACAGGCCCTTAGCCGGGATCTCCTAGATCTGGACCTGGGACCTAATGAGAAAATATTACAATATGTAGATGATCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGATCGGGTACAAGAAATCCTCCAGTTGCCCTCCCCCACGACTTGAAAACAATTGTGAGCTTTCCTGGGACTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCGGCCCTTATATGAAAGCTTATAGGGACGAGATGATTCAATCCCACTGATGTGAGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTATGTCAATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCGATCCAACTTCCCGAGGTTGGCCCCCCTGCATTCGAAATATTGCAGCATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATGGGAGAGGCCATTTATGGATGTCTGATCAAAGAATCCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTCCCTACCCCTGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCCGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTAGATGGAAAAAGAAGAGCTGGGTATGCAGTAGTCTCCAATTTTGAGACCATAGAGGCTAAGCCTCTGCAACCAGGTACTTCAGCCCAATTAGCTGAGCTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAAAATAGCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGACCCCTTGACCACCCGAGGGTCCCCAATCAAATATGGTGGTCAGATTCTTCGACTCTTGGAGGCAGTCCATCTGCCCACTGAGGTTTCAGTCTCCCACTGTAAAGGACACCAAAAAGGGAACACAGAAGTGGCACGAGGGAACCAAGCATCTGATCAGGCAGCTAGGAGAGCAGCATTACAGAACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATTTGGGGTTAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGATAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCCTCCAAATACTACTAGAAAGGTCCTTCAGAGGAACAGGCCTCCAAACAACTATAAGACAGGTGGTCTCCTTTTGTCTCACTTGCCAATTAAACAACTCCCAAGGAGCTCAAAGACCCCAGCTGGCCCAGCCCATCCAACGATGTGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAGTACCTATTAGTTATGATAGATACATTCACAGGATGGATTGAAGGCTTTCCCACCCGGACTGAGAAGGCTGAGGAGGTGGTAAAAAAAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCCAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGCATTGGGCATTACTTATTATCTCCATTGTGCCTGGAGGTCTCAATCTTCAGGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCCGCACCTGCATTGCCCCTAAGGAACAGGTTGGTCTTAGTCCTTATGAGATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGACCATTGGGCAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGAACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCAAGAGTCAAGCCATGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGATACCTATTCAGAACTACCAATGAGTGCCATTCTAATGAACACCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGGATAACTCTAAGGAGCCAACAGAGCTTGACAGAGACTGTACTCCAAAACAGACAGGAGATAGATCTTCTGATCCCTAAACAAGGAGTGACTTGAGCTATCCTGGCGATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCGTGTTATGCTATATTGATGATGCTTATGATTATTCTATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTACAGCTGACCACGGAAAATATCACACAGCCTTGGACACCGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCACTGCCCCATTTCAGCAGGAAGTAGCCAGAAAGACCTCAACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGAATGTTAGGTAGTCAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAAACATATAAAAGGAGGAGCCAAAGAGCTTTCTCTTGGACTCTATCTCCCACGTGCGTGTGCTCTTTTCTTTCTCTCTCTCTCTCTCTCTCACCCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACACGGTTTGTCCAAGACCCGAGAGCTGTGATGCGCCGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAGACAAAGAACTGAGGAACGTACACTCATGTGACAGAAAGCTAATTGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCTTAAAGGAAATCAGTCCTGAACATTCATTGGAAGGACTGATTTTGAAGCTGAAACTCTAATACTTTGGCCACCTGATGCGAAGAACTGACTCATTTGAAAAGACCCTGATACTGGGAAAGATTGAAGGCAGAAGGAGTAGGGAATGACGGAGGATGAGATGGTAGAATAGCATCACCAATTCAATGGACATGAGTTTGAGTAAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCGTGGGGTTGCAAAGAGTTGGACATGCCTGAGCAACTGAACTGAACACAGAAGCCACGTTTTTGGCCTCATGTTCTTCACCGTGAGTGTGCTTTCCAGTTCACTGCATCCCTCTCAGCCCTTCCTTTTCCACTTGACCTGCTTCACGCATTCATTCATCCTTTGTGGTCTTTTTGTGGCCTCTAACTCCTTGTTCATTTGTTTTAATATTTTGAGGGCTGTGGATCTTTTTGAGGATCAGTGGAAACTCTAAAATGACTCACATATCACACATAAGATAAAATGTTATATATGATTTCAGGATACTTAGAACTGCCCTGGATCCATCCAGGGATGAGCCCCCTTCTTGAGATGCACGGACCCCTTTACCTCAGTTATATTGAAGATATTTTGGCACACTGGAGTTGAAGGATTCTTTGCAATCTTCTGCTTCTCTGGAGTGGAGAAATCTCTGTCAGAGCTATCCACATGTAACTGTGCACGTATTTGTCATATACAAGGTCAAGTGCCCATATCCTCAAAACAAAGGGTTGTCCTAGCACACACAGAACATGATTAAGGGGAGTTGGCATGACTATCTGAGGGAGTATCCCTAAGGTCTTTGACAGTTTTCCACAGGAATCTGAAAAGAGATTGTCTTTGACCAGATTCTGGATAAAACCTAGACATAGGCATTGCTATTGAGCTGTTTCTTATCCTCATAGAAAAATGCATTTATTGAGAGAAAAGCCTCTTCCTGAGAGAAAAGGGGAAGAGGGTTCTTCCAAGAGGCTTAGAAGTGACTTTGCTCAGCAAATGGCTATTTATCCTCTCAAGTGATTGATAATATGCATTAAAAATCACCTTTGTGATTAGAGAAGAAGTTCTCTTAGTGGCTCCCTCCCAGGGGAAGGGTGGGGAGCTGGCTTTTATCAGAGCTCATCTTCCCAGGGAGGGTAGAGAATGAGGAACCCAAGAACAGTGAGCTTGGTCACCAAGAGAATTGAATTATAGTCCCATGAGATCATGCTGTCAGCTAGACTGCTTATCACATGTAAATCTGCTGCAAGCCTATGAGTTAGATTCTATTATTCCTGTTTTACATATACGGACACTGAGGCACAGAAAGGTAAGGTGATTTACCGCAGGTCACAAATCTTGGAGGCAATGGGTCAGGCCAACCTGACTCTGTCAAATACAGTCTTATCTACAATGCTGAGAGCTGCTCGGTGTGTGAGTGGGTGAGAGACTCAGGCTCCCCATATCAGCGTGAGTCATACTTGGTGGTGAAGGGAGGAGGAGGAGCGCAGGGCAAGATGCCAGCCAACTCCTGCAGCATCTCCTCCCTGAACGCAGCACCACAGAGCAGCAACTTCTCCTGTGAGAGGAGCCATAGAAGTTGCTTAAGGGAGCCCAAAGGGGATTCTATTCAGAATAGGAAGCAGACAGCCAACCTAAACTATCTCCCTGAAGGTGTGAAAACTCTTGGCTCTGACTTAATAACTAGTTACATTAACTTAGTACCTAAACTCTGCAAGGTCCCTTCTCTGGCATCATTTCATTTTCCTCTGAAATAACCTTGGAGCATTGCACATTTATTTCACCCACTTTTCTGCTTATACATTATCTTTCATAATAAAAAGGCAAAAGAATTCACATATACAACTCA TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 97374 TCONS_00082439 TCONS_00082443 TCONS_00082444 TCONS_00082445 TCONS_00082446 TCONS_00082447 TCONS_00082448 TCONS_00082449 . 3' 106333 EMBV3_14044 TGGCGGACGACAGAGACAGGGACAGCACAGAGAGGTCGGAACAATTATCAGGTCATTAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27149 CAGCCTTCCCCATTACACTCAACACTGTCTGGGGCCCGTACTCCTTTCTCTGAAATCCTT Gene GeneID:614962|MGC151592:NM_001083770:101_cdna Constitutive 0 NULL GeneID:614962 16 GENE MGC151592 NULL hypothetical LOC614962 EMBV3_21766 CTGCTGAGAATAGATTGTAAGAACACAAGGTTACCCAAAGAGAAACCTGCTCAGAGGCTG Gene BVT0101_003298 - 1 EMBV3_41387 GK000011.2:69702230-70321847 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27846 CTCACACACGGAGACCCAACAGGCTGAGTGAGAAGATGTCCCAGACTCAAAAAAGCTTGG Gene GeneID:506821|IFFO1:NM_001083380:20_cdna Constitutive 0 NULL GeneID:506821 5 GENE IFFO1 IFFO MGC151662 intermediate filament family orphan 1 EMBV3_28573 ACCAGTTGTGGTCCCAGGTCCAGCAGGTCATCCTGTCATACAAGGACACGACTTCCATGA Gene GeneID:784663|PLCXD1:XM_002699922:43_cdna Constitutive 0 NULL GeneID:784663 X GENE PLCXD1 NULL phosphatidylinositol-specific phospholipase C, X domain containing 1 EMBV3_34097 ATACACTCTCACTTGAACCTCACGACGACCCTGAGAAACAAAGATACAAACACTCGGGAG Gene BVV0102_454543 + 1 EMBV3_20461 GK000005.2:56677996-56683092 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191947 1 XLOC_117064 NonCoding TCONS_00191947 XLOC_117064 NonCoding NonCoding - 5:56680146-56680778 - TSS143748 632 2 TCONS_00191947_2 46 0.134493670886076 1 0 0.000376683974739435 3.64131558320148e-12 0.000328642132179035 0.000637662337380169 0.000168594691938251 0.000447916443360817 0.000205845966715382 0.000211115063291071 0.000105122854021805 2.31666077676237e-05 5.63344504460188e-06 1.19814670122259e-27 7.66678229453076e-06 1.57948957479505e-19 0.000458865106630239 0.000668644577673525 0 0 0.000845164633673041 3.91863861685555e-05 8.20322997365979e-06 1.26496095963109e-17 0.00095365232789405 0 0.000129348573319316 0.000839891970994235 0.00122020642555951 2.37244897508524e-20 4.2082833075844e-05 0.000416263798353104 XR_225903.1 LOC101902542 PREDICTED: Bos taurus uncharacterized LOC101902542 (LOC101902542), 8e-133 477 100.00 0.416139240506329 NR_045171.1 1700012D01Rik Mus musculus RIKEN cDNA 1700012D01 gene (1700012D01Rik), non-coding 3e-11 73.4 65.76 0.47626582278481 0 noncoding CTGGGCGCTCGGCCTTGGGTCCCGGCCCAGGAAAGGGAACGCGGAAGGGACCTGGTCCTGGGGCCGGTACTAGGCCAGAGAGGGAAGAGGGGAGAAAAACCCCGCACACTGGGCCAGCCCATACCCCTCGGGGTCAGAAGAAATCTGTTTGGGTGCGAACGTGTGTTTGAGAGTGAAACTCCCGAGTGTTTGTATCTTTGTTTCTCAGGGTTGTCGTGAGGTTCAAGTGAGAGTGTATATGAAAACTGTAAATTGTGAAATGCTCAGAAGCAAATTTAAGACGTTATTCCCAGTTTGTACTTCTGTACCCCGAGGTTGTGTATCTATACGTTTCTTTACATCTACTTGTGTGTCTGTGTCTCTAGGTTTGTGAGCCCCTCTGCGTGGATTTAAAAATATGTACATTTTAAAAACCATTGACTTGTCAAGCCCCGCCAGAGGCCCAGACTCCCCCGCAGCCGGAGCTGCTGAGATGTCTGTTCTTCGCTTCCCTCCCACTCCTACCACCTCCAACTCCCCTCCTCCTCCCTTCCGTTGAGAACAAGGAATTTCCAGCCCTTAGCAAATGGAGAGAGAAAGAGACCAAGATTAAGAGAAACTACGGAAAAACAACAAAGACAAGAGACAGGTGA TCONS_00195101 TCONS_00195102 r 5' 2152 TCONS_00195101 TCONS_00195102 r 5' 2152 EMBV3_15813 GTGGTGAGACTCCAAGATGCACCCCAGAAGCAGGAACTGCACCACTGGAAGCTAATCATT Gene GeneID:783125|LOC783125:XM_002696129:247_cdna Constitutive 0 NULL GeneID:783125 19 GENE LOC783125 NULL hypothetical LOC783125 EMBV3_24150 GGAAGAGGAGACAGTGCAACTTCCTGGTGGTCCTGAGTGCAAGAGGTGCTACTACAGATT Gene GeneID:520402|LOC520402:XM_002693584:46_cdna Constitutive 0 NULL GeneID:520402 15 GENE LOC520402 NULL similar to proteoglycan 3 EMBV3_13382 AAGGGTCCCCATGCCCTCGAACAAGGACTATGTTGTCAGGCCCAAGTGGAATGTGGAAAT Gene GeneID:538614|IWS1:XM_002685214:89_cdna Constitutive 0 NULL GeneID:538614 2 GENE IWS1 NULL IWS1 homolog (S. cerevisiae) EMBV3_27407 AGTTCGCGCTGACCAACGGGGACCCCCTCAACTGCCACTCCTACCTATCCGGATATATTT Gene GeneID:281945|NR2F2:NM_174402:8_cdna UTR3_Alt 2 NULL GeneID:281945 21 GENE NR2F2 MGC157288 TFCOUP2 nuclear receptor subfamily 2, group F, member 2 EMBV3_36996 TGTGTCCCTGTTTATCTCCTTTATCCTCGTGACAGCTTCTTGAAGTACAGTGGTCCCCAC Gene GeneID:540447|RHBDD2:NM_001046478:284_cdna Constitutive 0 NULL GeneID:540447 25 GENE RHBDD2 MGC137605 rhomboid domain containing 2 EMBV3_12168 CAAGCGCGGCCCCCAGCGCCGGGAAAGCAGGAAGCATTCTTCGTGTTACTACTGCTGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42324 ACAGTTCCTCCTCATCCATTGGAAAATCCACATTGGATAAAAGCCTTTTGAGTGCAAGGA Gene GeneID:100124497|LOC100124497:NM_001102541:2_cdna Constitutive 1 NULL GeneID:100124497 18 GENE LOC100124497 MGC148601 hypothetical protein LOC100124497 EMBV3_22613 GAGAAGTTCTTGGAGTTTCTCAGTTACCGGCGGAAGCAGGAAGTCTTGGGCTGCCCTCAG Gene BVV0102_118914 + 0 NULL GK000008.2:67434836-67481088 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228027 TCONS_00228024 TCONS_00228025 TCONS_00228029 1 XLOC_138390 Coding TCONS_00228029 XLOC_138390 NonCoding Coding LOC100298923 8:67430062-67440404 j TSS170108 1260 1 TCONS_00228029_4 294 0.538888888888889 6 0.87873513199884 0.00879565236092743 0.0159719893835272 0.00823695949605325 0.00495059845220426 0.00681555225746096 0.00223583093135128 0.0061557690132728 0.00628716604720812 0.00233418475898544 0.000964665244716216 2.88896565390427e-05 0.00134005059252247 0.000672131206850087 0.000555493071709931 0.000658394688714783 0.00341207692279968 1.16220084025384e-36 8.35931645760783e-05 0.00293370833597894 0.00346789305405036 0.00271727777272536 0 0.000150960666547569 1.54626688680674e-15 0.00771391828959295 0.00173464743748599 0.00309573692656801 0.00013259725264313 2.62916316058829e-22 3.32053781319723e-18 XR_235620.1 LOC100298923 PREDICTED: Bos taurus uncharacterized LOC100298923 (LOC100298923), 2e-169 600 99.70 0.265079365079365 NM_001001662.1 ZNF782 Homo sapiens zinc finger protein 782 (ZNF782), mRNA. 2e-30 138 84.13 0.0992063492063492 0 noncoding 0 1 1 1 0.0606351417617975 0.584461201274052 0.0165989219785802 0.761695309355878 ATGAGTGAGGAAAAAGCAGAGGTGACAGGATTTGGAAGAAAAGTCTCACACCGAGGGAAAATAGTGCCACCTGCTGAGTACATCATGAGAAATGCTGGGCTGGATGAATCACAAGCTAGAATCAAGATTTCCAGGAGAAATATCAACAAACTCAGATATACAGATGACACCATCATTATGGCAGAAAGCGAAAGAGGAACTAAAGAGCCTCTTGATGATGGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAGCATTCAAAAAACTAAGATATTGGCATCTGGTCCCATCACTTCATGGCAAAAAGATGGGGAAACAATGCAAGCAGCGACAGACTTTATTTTCGTGGTCTCCAAAATCATTGTGGACAGTAACTGCAGCCATGAAATTAAAAGACATTTGCTCCTTGGGAGAAAAACTATGACAAACCTAGACAGCATATTAAAAAGCAGAAACATCACTTTACCAACTAAGATTTGTCTAGTCAAAGCTATGGGTTTTCCAGTAGTCATCTATAGATGTGAGAGTTGGACCATAAAGAACACTGACAGGAACCTGATAGCTCCGTTCGGAGTCACAGGGAGCGCGCGGAGGATGGGAAGTGTAGTCTTTCTCCGCCCCACAGCGCTCCTGGTCTCCGCGGGCTCCCTCTGCGCATGTCCGGTGAGAAGTTCTTGGAGTTTCTCAGTTACCGGCGGAAGCAGGAAGTCTTGGGCTGCCCTCAGGCCCAGGCGGGACTCCGCAGTGCCCGAGTCTGGCTTGGACCTTAGCTCTGGGAAGCTGAATCGTCACTGTCCTCTACTCTCCCAAGACCCACTGAAAATGAACATATCTGAGATTGATGAGAAATGTGCCTTCACAGACATCAGTGTCATTCAAGGATATGAGTGTGGAGTTTACCTGGAAGGAGTGGCAGCATGTGAATCCTGCTCAGAGGACCCTGTACAGAGATGTGATGCTGGAGAACTATAGCCACCTTGTCTCACCGGGTGAGCCTACTTTATTATAGGACTCTGACTCGGGTGCAGTTGATCTTCTGTTCCTGCTTTTTTTTTTTAAGTAAATTACCTGTATTGAGGAGTAATTGACAGAAAAGAAAATTTAACAGGTTTCTGTGTATACTAGAATGAATTCTGGACAATATGTACAGCTGTGGCACCAAAGTCACAATACAGATTATTTCTGCCATGTGAAAGTTTTCCTTGGCTGTTCTCTGTCCTCTCTTGACACCTATTTTCTGATAATCACTGATCCTN EMBV3_02717 TGTGCCCAGGCCTCCCTGCAGCAGACCCCAAAGGCTGGCAGGCCTCCTTACAGGCCTTGA Gene GeneID:528545|ANKS3:XM_002697951:648_cdna Constitutive 0 NULL GeneID:528545 25 GENE ANKS3 NULL ankyrin repeat and sterile alpha motif domain containing 3 EMBV3_09355 CTTTGGCGAGCTCTTCAGGACACACTTCTTCCTCAACGCGGGGAACCTCTGCAACCTCAA Gene GeneID:618777|SAMM50:NM_001046623:219_cdna Constitutive 0 NULL GeneID:618777 5 GENE SAMM50 MGC137813 sorting and assembly machinery component 50 homolog EMBV3_37019 GAACCCTGAATATCTGGAACATGATGCCTAGGGAAAGAAACCCTGATGCCTCCTATCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37297 TCTCTAACATGCTGGACATCAACGGCCTGTCTGTGCCACCGAACATAGCAGAACTGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29844 AGGAGACTTCTCACCGCAGCACTGCCTTACTCACATCCAAGACACCTGAGACATCATTTC Gene GeneID:507549|TIMD4:NM_001075320:2_cdna Constitutive 3 NULL GeneID:507549 7 GENE TIMD4 NULL T-cell immunoglobulin and mucin domain containing 4 EMBV3_41610 TCCGTCTCCACCCTGCCTCCCCTGGCCCCCAGCCTGAGCAAGTGAGGATGCAGCAAGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22293 CTCCTAAGGCACCCGACCTTCTGTGGCCATAATATCCTCTCCCATTCCTATTGTCTTCAC Gene GeneID:527128|LOC527128:XM_002693219:437_cdna Constitutive 0 NULL GeneID:527128 15 GENE LOC527128 NULL similar to olfactory receptor Olr136 EMBV3_17653 GAAAGAGCTCATGACTATGATGGGGCTCAGGGTCTACAGTTTGGTACTGGTGAGCTGGAG Gene GeneID:100300175|AGBL1:XM_002696532:172_cdna Constitutive 0 NULL GeneID:100300175 21 GENE AGBL1 NULL ATP/GTP binding protein-like 1 EMBV3_02660 ACTTTTGCACCCGCACCCACTCAGCCCTGTGCTGCCTGCCCTGGTTAACCACCAATAGGA Gene BVV0102_312473 + 0 NULL GK000021.2:28626138-28629931 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43470 TCCTCAGTGGACAGCCAGGACTTGCCAGAGGTATTTCCCAGGTGGTGAAGGACCACGTGA Variant GeneID:538666|MGC139309:NM_001076118:46_cdna 243^336 1 EMBV3_39841 GeneID:538666 1 GENE MGC139309 NULL hypothetical LOC538666 EMBV3_33860 GCGCGCCTTGCGGGGGTTAAGCCGCGATAAAGACCTTGCTTAGCTAGCAGTTCGTATTCT Gene GeneID:510442|LOC510442:XR_084536:99_cdna Constitutive 0 NULL GeneID:510442 7 PSEUDO LOC510442 NULL similar to DOT1-like, histone H3 methyltransferase EMBV3_07989 TGGAAGAGCAAGTAATGTTAACTGAAAAAGCTCTGATCTATCCAGCGAAGAGGGATGGAG Variant GeneID:508861|SAT1:NM_001034333:11_cdna 300^615 3 EMBV3_15763 GeneID:508861 X GENE SAT1 MGC127572 SAT spermidine/spermine N1-acetyltransferase 1 EMBV3_12261 TCTTTGTCGGAGCACGAATCTACCACACGATTGCGTATTTGACACCCCTTCCCCAGCCAA Gene GeneID:493719|MGST1:NM_001007815:23_cdna Constitutive 0 NULL GeneID:493719 5 GENE MGST1 MGC159431 MGC179255 microsomal glutathione S-transferase 1 EMBV3_29143 TTGCTCCGAAGATTAAAGCTCAGATGATAGTGGAGGGTACAGCCATGCTCAGCTACCAGC Gene GeneID:529488|LOC529488:XM_002697841:552_cdna Constitutive 0 NULL GeneID:529488 24 GENE LOC529488 NULL similar to glutamic acid decarboxylase EMBV3_21845 ACAAGGACCCTTATTTTCCACATCATCACCCTCTGGGCAGCTGTCATGGAGAAGCGCAGT Gene GeneID:503581|HNF1B:XM_002695619:10_cdna Constitutive 0 NULL GeneID:503581 19 GENE HNF1B HNF-1b HNF1 homeobox B EMBV3_05741 CCATCGACGGCTTAGAAGATGACCAACATGGACAAGTGTATGGACCGTTGGACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_23013 CCCTGCTTCCGGGAATAGGAAGCGCTTGAGGGTGAGCTGTGTTCACACTATTTATACCAA Gene GeneID:510658|SLC2A6:NM_001080256:55_cdna Constitutive 1 NULL GeneID:510658 11 GENE SLC2A6 NULL solute carrier family 2 (facilitated glucose transporter), member 6 EMBV3_01127 TTCCATCTGGAAATCAAGCAAGTTTGACCTACATGATTTCCTTCCCAATACCTCATAGCT Gene GeneID:282707|CEP290:NM_174722:32_cdna Constitutive 3 NULL GeneID:282707 5 GENE CEP290 KIAA0373 centrosomal protein 290kDa EMBV3_40434 CCTTTGTACGATGGCAGAGACCAGAGGAAAGGACACCGACAGAAACAGCAATCTGAAGAT Gene BVT0102_092107 + 0 NULL GK000017.2:71535271-71551241 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076231 1 XLOC_046758 NonCoding TCONS_00076231 XLOC_046758 NonCoding NonCoding - 17:71535557-71536663 - TSS57257 703 1 TCONS_00076231_1 41 0.637268847795164 2 0.365610859728507 0.000154805495151375 0 0.000131635820269622 1.18124419243513e-05 0.000344128025522845 4.12728521793772e-10 1.65903218965202e-05 8.41353151633618e-06 2.24470256081184e-05 4.63469719587441e-11 0 0 0.000497941276556561 1.33825874756198e-05 0.000132600006754268 0 0 0 0.000663029901017726 0 0 0.000306116199379617 7.82990352119837e-05 7.15416902530743e-05 0.00010841155275883 0.000220484449198272 8.59775890527696e-05 2.73262422075414e-05 0 0 XM_003582782.2 GCFC2 PREDICTED: Bos taurus GC-rich sequence DNA-binding factor 2 (GCFC2), mRNA. 9e-19 98.7 91.55 0.0995732574679943 NR_038888.1 LOC284950 Homo sapiens uncharacterized LOC284950 (LOC284950), non-coding RNA. 2e-26 123 72.18 0.331436699857752 0 noncoding 0 0 0 0 -0.16644677610386 0.359543860659665 -0.0313265922821407 0.513849250570028 CAGCCACGCGGAGGTGGGAAGTCAGAGAGGCTGTGCTCGCAGTTTTCCTTTGTACGATGGCAGAGACCAGAGGAAAGGACACCGACAGAAACAGCAATCTGAAGATTATGCGAGTGGTCCCCAACGTGTCCTTTACTCCCAGGGGTTGCTGCTGCTGGGAGCTGGCTCAGTCTGAAAACTGAGCCTTTAGAAAAACTGCATCGTGATAAAAGAACAGAGCTCTAAGGAGGCGTACATTCTTTTCCCCAGTATTTTATTATGGAAGATTTCAAGCATGCAGAAAAATGGAAAGAAGATTGCAGGGGACACCTGTGTAACCACCAACATTGAACCACCAAGATGCTCCTGAAGAATTAGTTGGAGATTTTGATATCTGGCAAAACTAATACAACATTGTAAAGTTTAAAAATAAAATTGAAAAAAAAAAAAAAGAATTAGTTGGAGAGAATAAGACATACAATAAAGGTGCAGTAATCAAAAACAGTATGGGAAAGACAGACATATAGACATGCGGAATAGAATTGGGAGTCCAGAAGTAAACCCAGAGGTCCACAGCCAGTTGATTTTCAACAAGGGCACCGAGACCATTCAGTGAGAGCAAGAACATTCTCTTCAACAAATGGTGCTGGGACAACTGGCTATCACATGCAAAAGAATGGGACTCCTACCTCACACTGTATACAAAAATTAACTCAAAATGGAC TCONS_00078154 TCONS_00078155 r 5' 288 TCONS_00078154 TCONS_00078155 r 5' 288 EMBV3_09349 TGCCGTGTTGTTATTTACACTCTGACAGCCTTCATGTGGTAGGTTCTTTCTCAGGAACTC Gene GeneID:508208|LATS2:XM_002691865:176_cdna UTR3_Alt 2 NULL GeneID:508208 12 GENE LATS2 NULL LATS, large tumor suppressor, homolog 2 (Drosophila) EMBV3_34548 GGGCATTTCGAATGGTGTTGGCACATTGTCAGGAATGGTTTGCCCTATTATTGTTGGTGC Gene GeneID:100125225|SLC17A6:NM_001103110:10_cdna UTR3_Alt 2 NULL GeneID:100125225 29 GENE SLC17A6 MGC166269 VGluT2 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 EMBV3_17717 TGAGGAAGGGGAGAAACCTCTCACCATTACAGGCAACTGGCTACCTGGCTACAAGTCTCT Gene GeneID:100335743|LOC100335743:XM_002694032:40_cdna Constitutive 0 NULL GeneID:100335743 16 GENE LOC100335743 NULL hypothetical protein LOC100335743 EMBV3_30656 TCAGGAATACCTACTTTAGGAGCTTGGTGCTGTTGTCCTGTGGACTCTTGATATGCCTGG Gene GeneID:511585|CRBN:NM_001075527:38_cdna Constitutive 0 NULL GeneID:511585 22 GENE CRBN MGC142805 cereblon EMBV3_42970 TGCACCCTCCATCAGCCTCCAGGCCAGAAGCAAGAAGATAGAGTATCTCTGCAAGACAAA Gene GeneID:100125834|STOM:NM_001105473:2_cdna Constitutive 2 NULL GeneID:100125834 8 GENE STOM MGC179290 stomatin EMBV3_17615 GCAGAACATGAAATTCCTTCCGTTCTAGTCTTCCAGTGACAAACTCCACTTAGCAGGGCT Gene BVT0102_194651 - 0 NULL GK000005.2:5559918-5575915 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19107 TGTTTTGATGCCAACACCGGCCTCTTTGAGAAGCATCGGCTGCGCCTGGTGGCCACTGAT Variant GeneID:319141|GCAT:NM_001075134:16_cdna 434^580 4 EMBV3_11870 GeneID:319141 5 GENE GCAT NULL glycine C-acetyltransferase EMBV3_19150 AAGGCCCACAGGCTGATACAAAGGGCAGTTCTTTTGCTTATTTCCTAGAGATATGTGGTG Gene BVT0102_097308 + 0 NULL GK000013.2:61885790-61900819 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043347 TCONS_00043363 TCONS_00043346 TCONS_00043354 TCONS_00043355 TCONS_00043372 TCONS_00043362 TCONS_00043361 TCONS_00043351 TCONS_00043349 TCONS_00043366 TCONS_00043370 TCONS_00043353 TCONS_00043350 TCONS_00043345 TCONS_00043364 TCONS_00043352 TCONS_00043365 TCONS_00043359 TCONS_00043356 TCONS_00043358 TCONS_00043368 TCONS_00043371 TCONS_00043367 TCONS_00043357 TCONS_00043360 TCONS_00043348 1 XLOC_025921 Coding TCONS_00043366 XLOC_025921 Coding Coding TPX2 13:61831768-61892271 j TSS32078 8939 1 TCONS_00043366_2 740 0.146436961628818 19 0.852566857293974 8.04259148530406e-05 8.02106553308231e-05 0.000107741573018027 0.000148080806717487 0.000202788952148359 5.08143655313072e-05 7.95864176908967e-05 1.06391823202781e-05 0.00018604320124923 0.000340010562298179 0.000263831336410545 5.2606199072591e-20 5.70927829024391e-05 2.27411810140596e-05 2.86992271884653e-13 0.0035086695836418 1.89518159846863e-07 0.00361286086905715 4.9950124877762e-05 5.59489132252609e-05 4.64716597807273e-13 0.00111746750634856 0.00116481260805175 0.00147215891447533 4.86189589765331e-05 2.19347381934075e-28 4.6986425817972e-05 0.000274629404061425 4.80307076644021e-06 0.000212802606374966 XM_005214604.1 TPX2 PREDICTED: Bos taurus TPX2, microtubule-associated, homolog (Xenopus laevis) (TPX2), transcript variant X6, mRNA. 0.0 1.017e+04 100.00 0.630495581161204 XM_005260340.1 TPX2 PREDICTED: Homo sapiens TPX2, microtubule-associated (TPX2), 0.0 3038 82.09 0.344221948763844 TCONS_00043366_2 sp|A6H6Z7|TPX2_BOVIN TPX2_BOVIN Targeting protein for Xklp2; 0.0 1311 92.90 0.998648648648649 3 coding 0 1 1 1 -0.0506785689635531 0.846840451799398 0.00533968242446917 0.919970509557098 CGTTCAAATTTTTCAACGGTACTGAATGAGTCCCGCGGCGGGTTTTCGCGGCGGTCGGTTGACAGCGCTGGGCTGAGGTGAGCAGTGAGGAGGGAAGAGGAGCAGTTGGGGCGCCCGGCGGTCTTCACCCTAATTTCAAGCGACTGGAGGTCTCCGCGTGGAGGGCGCAGCTCCTGGGACGTGTACTGCGGGGGTGCCGCCCTGACCCGCGGTGCAGCCGCCCTGACCCGCGGTGCAGGAGCGGAGCTTCCGGCCTCCTTTCCCTTCGCGACAGGATTTCTCCGTGAAGTTCGGCGGAGCGGGTCTAGCAGGCTGTGTTAGCAGATTCTGGAAAAGAAGTATTTTCTGGACTTCAGAATTTCAGAAGAGAGGTGAAAGAGTATATTGCATCTTTGAATAAAGTCTGTAGTCAGGGGTACTGACCAGATTAAACCACAGGAAGTGACCTGTTGAGAAAAGTGACACAAACGTTGGAAGTAACCTACTGTTTTGCACCAAGGGTGGAACACAATGTCACAAGTCACAACCTCTTATTCCTATGATGCTCCAACGGACTTCATCAATTTTTCATCTTTGACTGATGAGGAAGATACGCAACACATAGATTCCTGGTTTGATGAGAAGGCTAATCTGGAGAATAAGTTTACTGGGAAGGATGGTACAGGAGGGCTTTATCAGGGCAAAACACCTCTGAGGAAGGCTAATCTTCATCGAGATGTCACACCTTTGAGGCCAGTTGATAATACTTACAACAAACAAGCAGAAAAAGAAAATCTGGTGGAAGAGTCCATTCCATCAAATGAATGTCCCTCTATGAAAGTCAAAGAAACCACATCAAGAAATAATCCAGTTCAGCCTCAGAGAAGATCTCTCAGACTCTCTGCTAAGAAGAATTTGGAACAGAAGGAAAAGCAGCATGTAAAAATGAAAGCCAAGAGATGTGGTACTCCTGTAATCATCAATGAATTTCCACCCTCCAAAAAAATGAAAGTTTCTCACAATAAAAAGAATTTAGAAGAAGAGGAAGAAGGCAATGCTTGTCAAGATATTTCTGAAAAGAATGAATCTTCCCCTGAAAAAGCCAAGGGCAGACATACTGCGCCTTGTATCCCACCTGTAAGGCAGAAGATTCTAAAAAGTACTGAGGAGCAAGAGTTGGAAAAGAGAATGAAAATGCAGCAGGAAGTGGTAGAGATGCGGAAAAGGAATGAAGAATTCAAAAAGTTTGCTCTTGCAGGAGCAGGACAACCTGTGAAGAAATCAGTGAGCCAGGTAACCAAAGCAGTTGACTTCCACTTCCGCACAGATGAGCGGGTCAAACAGCATTCTAAAAACCAGGAGGAGTATAAGGAAGTGAACTTTACATCGGAACTGCGAAAGCATCCTCCATCTCCTGCCCGAGTGACTAAGGGATGCACCATTGTTATGCCTTTCAACCTGTCACAAGGAAAGAAAAGAACATTTGATGAGACGGCTTCTACATATGTCCCCCTTGCACAGCAGGTCGAAGCATTCCATAAACGAACCCCTACCAGATACCACCTGAGGAACAGGAAGGATGATATTATGCCATTACCCTCCAAATCTGTGGTCAGAATATGCAGAGACCCACAGACTCCTGTGCTGCAAACCAAACATCGTACAAGGCCTGTGACCTGCAAGAGTGCAGCGGATCTGGAGGCCGAGGAGCTTGAGAAGCAGCAACAATACAAATTCAAAGCACAGGAACTTGATCCCAGAATTCTTGAAGGTGGGCCCATCTTGCCTAAGAAACCGCCTGTGAAGCCACCTACTCAGCCTGTTGGCTTTGATTTAGAAATTGAGAAAAGGATCCAGGAGCGGGAGTCAAAGAAGAAATTGGAAGAGGAACACTATGAATTTCATTCCAGGCCCTGCCCTACTAAGATCTTGGAAGATGTTGTGGGTGTTCCTGAAAAGAAAGAGCTTCCAATCACTGTTCCAAAGTCACCAGCCTTTGCTCTGAAGAACAGAATCAGAATGCCCACCAAAGAAGATGAGGAAGAGGAGGAGCCAGTAATGATAAGAGCTCAACCTGTGCCATATTTTGGAATGCCTTTTAAGCCCCAGATCCCAGTGGGGAGAACTGTGGAAGTATGCCCTTTTTCTTTTGATTCCCGGGACAAAGAACGTCAGTTACAGAAAGAGAAGAAAATAAAAGAACTCCAGAAAGGAGAGGTGCCCAAGTTCAAGGCACATCCTTTGCCTCACTTTGACACCATTAACCTGCCAGAAAAGAAGGTGAAGAATACCACCCAGGTTGAGCCATTCTGCTTGGAGACAGACAGAAGAGGTGCCCTGAAGGCACAGACTTGGAAGCACCAGCTGGACGAAGAACTAAAACAGCAGAAAGAAGCAGCTTGCTTCAAGGCTCGTCCAAACACTGTCATCTCCCAGGAGCCCTTTGTTCCTAAGCGAGAGAAAAAATCCGTTATCGTTCAGGAACCTTTTCAGCTGGCGACAGAGAAGAGAGCCAAGGAGCGGCAGGAGCTGGAGAAAAGAATGGCTGAGGTGGAGGCCCTGAAAGCCCAGCAGCTAGAGGAAGCCAGGCAGCAGGAGGAAGAGCAGCAGAAGGAGGAGTTGGCCAGACTACGAAAAGAACTGGTACACAAAGCAAATCCAATACGAAGATACCAGGGCGTGGAAGTCAAGTCCAGTGACCAGCCCCTGACCGTGCCCGTCTCACCCAAGTTCTCTACCCGATTCCACTGCTAAACTTGGCTTTGAGCTGCAGACACCATCTGGGAACCTGAGCTGCCTTTTCCATCAAACCAGGAGCCACCTTTGTCCTGGGGGCATAGAGAGAATCCATTTCTCCAAGGTTTTTTCCTACCCATGCCTTGCAGAGCATGCCTGACAAGTGTGGACTCCCGATTTCATTGAGAGTTGTTTTCCTATATTATTGTGGCTAATAATGAGACTCAACTCGTGTATGTCTCAACCAGACTCTTTGGAACCATCAGTATGATGGTTGACCTTCAGTATGGACCTTAATTCTGACTAGAATTTAAGCCTCTGTATCAGCGCAGTGTAATTTCTATTGCCCTTATCCCACCTCTCTTTTTCTATTTTAATCATAAAATAAACATAGTTAAATACTGATAGATTTAAGTCATGGATTAAATGGAACCATGAGATTCTTTCTTCTTCTCTGTGCAAAATGAAGTTAGAGTTAAGGAGCCCATCACTATGAGTGGGGAGGCCTCATGAACTGCCTGACGAGGAAGAGACTTGACTGACCAGAACCTCAAAGCGGCCATCAGCCGGCTTCAGGCAGGTCTGCTATTCAGGCAAATTCTTCCCTTGTTGGTGCCTATGATAACAGAACGCTGAGCAGTACATGTGTTAAGTCTTCCAGTGACCTGGACTGGAATAAAATTTGTTTTTCCCCTCCCTCCCCCCAGCCCCAATTTTTTGTTATTTGATGTTTCTACATCTGTTGAGCCCCTTTAGAGGTCACATCTTATTGGGGAAGTGGCTACTTTGAGACAAGAGTCCAGGAGCTTTTAAAAGTATAGGCTCTGTCCTTAAAGGAAAGTGCTCTTTTCTGTCCTGTGTCAGAATCCTTCCATTGTTTGAACTCCCTCCTAGGAACGACTCTGGAAAACTGTTATTCCTTCAAAACGGACTGTGCCTTCTTCTCCAAATGTGTTTTTTCTCATCTGGTAAACTCTTCCTTATGAAATCTTTCTCATAAATCTTTCCTTGACCATGTGGTCTCATCCGGTAAGGATGGTAACTTACTTCTTTGTGCCTCCCAGATGTTTCTTAATGTATATATCTCTAGTAGAACAGGTAAACCACTGAGTTTCTTGGACTTGTTTACAAACTAGTAGAGATGTAGATAACTAAAATTGTTATTCCTTGAAGATAAAAATTAGGGTAATCATATCCGTGGTCCTTGTATTCTGTTGGCACAGAATTTGCTAGGTTCATGTGAAATAGTTTATTTTCTTTTAGACTTGATATCGTTTATGAACTCTTACTCTGTACCAGTCTTAATTCTGTGCCACGAGTTAAAGGCTGTATCCATATTCTGCCGAGGCCAGTCAGTCCTAAGCAGTATATATGATGTTGGATCTATTTTATATTCCTTTTGTTTATTCATTCGATGAGCATTATTTACAGTCCATTGCAGATTTAGTGATGGGCAGCAAAGCGACGTGTGATTTGCAGATCCCTGCGTCTCCTAAAGGCCCACAGGCTGATACAAAGGGCAGTTCTTTTGCTTATTTCCTAGAGATATGTGGTGTATAGTTCCATAACAACTTGTGTAGTTGCTTTACAAAAGATTGATTTGGTGCTAGTTATACATATGTTGGCATTGTTCTAGTCTCTGGGCATATAAGCAATGAACAGAAATAGAAGACCTTGACTTTATGGAGATTACCTTTTAGAAGGGAGACGGACAATAAACAAGTAACTGTCCTCTTCTGTCAGGTGATAAATGTTTCTCTGACTGACTGCTGTGTGGAAAATAGACTGAGATGGGTATCTGGGGGGCATGTGAGATTGAACAGGAAGGAAAGGAGGTTCTTGCTGTTGTCCAGGTGAGACTGGTAGTGGCTTGGGCTAGAGCGGTAGCAGAGGAGGTGATGAGAAACGGTTGGATTCTGAATGGATTTTGAAGCTGTAACTGACAAGACTTGCTGACTGACTGGACTTGGAGAGGGAGAGAGGGTAGAGAAGGGCATTCAGGTATCAGCCTGAAACAGAGATAGAGTTCTCCAGGCCTTGTGCTGTGAAAAATCAGGTCTACCCCAGTCCTTGTGTCTCTTGTGGATTCTCAGGGGGTGAGGAGGACTTCCATTTGTTTCTTGTCACCTCTCTGGTTTTTCTACCTCTGTTCATATATTGGTCCCCTGTCTGTGCGTGTTCTTTTCGACTTTTCTCCTTCCCGTGTATCAGCAGTTCTCTTAACAGTTCGCTATCGTTCGTAGAGTACCATCTAAAACCATTTTTTCATATATTTTGTCCATTTATTGTTTCAGTTTCAGATGGAAGAATAAATCTGGCCCTCAAGTTGAGAATTTTAGAGTGTTATCAAGAATTGTGGACCTATGGGATTTTTCACCCCATTTGCTCCAGCCTGGATTACCCCCTGTGGACATAACCCACATCAGGGTGGTAATGTGTGACAGCCTTAGAGACAACAAGGAGGGATTATATTACTTCAGAGCAAATAGCTTTTCAAATTAAGATGGCCTTGCTTCCCAGAATTTCTGGGTGGCTGTCTATCTCTATCTCTTCTCTGTCTAGTATTGAATCCTTTCTTTTGGACCGCCTCATGTGACCTTCATTTTTCTAGTAAAGGCTCCCATTTTCCCTGAAAGTCAAACTGCTTTTATTTTACAGAGAAATTCAGGTTCTATTTTATCCTTCAAGACTTGTCCAAGAGGGAGCTTTGCTTTTAATACTCAAGCTACCCTGGAATTTTCCTAAACAAAGAACCGGACCTCTAATAGGAATGTACTGAATTCTTCTGAGAAATCTGGTGGCCATACTTGGCTTGGCAATTTTGTAAAACTCATAGCCCATGTGTACATGCAGATTATTGGAATTCCCACACCTTCTGGGAAGGACTCTTCGTTTTCAGTGTTGTTTTGACTTGGTCATGGTTCCCCATTTACATAGTGTTTTATACTAATTAATACAAAATTATTGTTCACTCTTAATTTGATCATTTTGTCCTTGTGTAATTGCTTTATTGCCATTTTGACTCCTGTTTCATTCCTTACCAGTTCTTTTCCACAGAATTTTGTCCTTGGAAAGTGGAGCTTAAGTGGTAGACAGGCTTCGGTGGCATTTGCTCCAGCATTTAATAGAGATAAGTCTAGTACACAAATAGACGTCATACAAGATAGGATGTGACTGAGTAACAGGAGACAGAAAAAATGCTGCAGGAATTTAGAAATTCTTGTTTGAGGTGAGATTGCCGTCCTTAAAGATGTCTCTTTTTTAAGTAAAAATTATGAAAGTAGCACAGTCATCCCTCAGTATCCACAAGGGATGGGTCCCAGGACCTGTGGTACCAAAGTCCACAGATGCTCAAGTCTCATATGAAGTGGGTGTAACCTATGTGCAGCCTCCCATGTACTTGAAATCATCCCTAGATTACTTACAGTACCTAATACAATGTAAGTGGTTGTAAATACAATGTAAATGGTATGTAAAAAGTTGTCCCTATACAGCAAATTCAAGTTTTGTTTTCTGGAACGTCTGGAAATTTTTTTTTTTTTTTAATTTTTGACCTGTGATTGGTTGACTCTGCAGATATGGAGCCTGTAGTTACAGAGGGCTGACTGGACTGCCTTTTGGAAACAAAAAGTTCCCTTCTGAGTCTTGCCTGCTGGGGAAGTTCCTCATTGCTGAGAGTAGCAGTTAAAAAAGCTGTCAGACACGTGGCTGGGCTCCTGTTTCTGCACAGGCAGGCTGAGTAACAACTTGGTGGTGTGGATCCAGGTAGAAACTGGCCAGCGTTCTGAATCTGCCTTGCAGCCTGCTGGGATGCTCAGTTTAGACAACATATAAAGTTTCCTGGATACAGGACAAACCCAGGCCTATGGAAAGAGCAGGAAGGTTAAAGTGTGTGGTACTTTGAGCAGTGACGAGGGCGTAACCAGGGAGCTGACGTGTTTGCTTCAATGCCAAGAATTCCAGGACAATTTGTTATTCAACCAAAGCCTGTGTAGTTGCTACAAAAAAGAAGCCTGGGGACATATCTTTTCCTTGTTTTTGTCTTCCTGCATATCCATTCTATTCTCTAGTGCTATGGTAAAGATTGCTGACATCAAAAACAATGTCTGATGCTGTTTGCTATTCTCTTTCTTGCAAGAGAATAAGGGGCAGGGCTCTGGTCAAAACGTGGCTCTTATGTGCTGAAAGTATCAGCTTCTTGAAAGGGCTTGACAAATGCTAACATACTCCAAGAAACCATGGTTGGAAGGGCTTAGGAAAATCCTAGGTTTTATCAGGAATTATTTTGCCAGATTAAGCCTAGCCTGAGGGCATCAATTACCTTCTTTCTTTTTCTTAAAATTTTATTAAATGAGAAATAAAAACTGACCTGTCTGATGTGCCAAAACCCAAGTAGTTATGGGACTAGTATCCCAGAACCTCACAGGCAGGTGTGTGAACGGGTTAAGAATTGTTCATCAGCTTGTTTCAGCACTGGTAGTATTCTGGAGAAGGAAATGGCATCCCACTCCAGTATTTTTGCCTGGAGAATTCGTGGACAGAGGAGCCTGGCAGGCTACAGTCTATGGGGTCCAAGAGTCGGACGCAGCTAAGTGACTAAGCACACACACACTATTCTCAGGGCTTCTTTCAGGAGCCAAGGTGGGTGTTTTTCAGTGGGTCAAATATATAGTCAGTGGTTATAAATTGTTATTTGAAAAGCATTTTGGGGCAGCATTATCAAGTTTGCTGGTAAGGAGCGATGAAAAGCCTGAGTCTGACCTGACGCTGACAAACTCCACTCACAGTGTTCCAGTGTACTCTCTTATTTACTCTTTGAATTTGCTCTATGCAAAAATCTCAACTGGGTTTTGCAGTGTTTTTAAAATTGGGATTTATTGTTAATTATATACAGTTCAGAAAATACCTGGTAATGGCAGAAGAAAAAAATCCGTGATCCCATCACCCATGTTCAACACTGGTGTTTCTATGTATAATCTTCTCTTACAAAAATTTTTTTCTACATTGTAGTGGTTTTCTGTTTATATGTATTTTTTGTATTCTGATTTTTTTTTCAGCGTAGCTCAAATATTTTTCCTGTATTACTGCATACTCTATAAATACCAATCGTAATAGCAGCATGCTGTTCCATTGTCTTGAGTTTACTTCTCCCCATTGAAAATGTTTGTTTTGCAAAAGATTTTTCTAGGCTATTTATAAGACAGATTTCTCTGTCCCCCTAATGTATTATATCTGTCTCTAAAATTTAAATGGCTGTTTCAAACCACTTAGTCTTTGTAATTAAAATGTTCAAAGGAAATATAAGTCTCTCCCAAAAGCATAGTTAATGACATCATTCTGGCACACACGTTTGCAAATTGGAAAGCTCCTTTTGGCTGACATGTCCATGTTACTGGCCCTGGTGCCAGTGAAAAAGTTTATTGGCCCTTAGCAAAGCCTTTCTCAAGAGAATTCTAGTTATGCTATTTTAAAGTTTTGGAACTCTGTGTCTTAAGACAGATTTACCCAGTAGATTGTCTCAAAGCTGTTGAGATTTGTCTTTCTTAACTAGCTGGGCTATGAGGTGTCTTTTAGGAAGAGTAGAGGCAGGGAATATAATCTCTCTTCTGGCACAGGCACTCTGGGTGACCTTTAAAAAGGCATTCTGCTTTTCTGGACCTCAGTTTCCACATTACTTCAGTTTCCATATCGTCAAAGACGAGATTGAATTAGAAAGAAAAATAAGGTTCTTCCCAGCTTGAATATTTTCAGATTTTTTTCCTAGGCAATTTGTTTTAATCACAATAGCCCTGCTTTCACATTTATATTTTTCTATAGTCAGCTGCTCAGTCACTGCAAGAGGGCTCTTCTAGCAAGCTCCCTGCCCCTAGATTTCATTTGGACTTGAGTGAAGTATGTTGGAGACCAGTGCACTAACTCGTTGAGGACTTTCCAAGGGTTGTTCTGGAAGCGGAAATCTAGCCCAGATCACACCAGGGGACTAATCTCTGAATAATGTCCTCTGACACACACACATATTTTCTGATGTTTCTCTTGACCTTGGAACTGGTTAGAGACAGCACAGAATGCTCAACGAATTCTAACAGACTACAACAAGGAAGTCCCTCCCACCCTTGGCTTTTCCAAGACGTAAGCTTCTTGAATTGTTAGAGGCAGTTTAAGGATATCACCTTGCCTTGCTGCTCTTCTATTTCTCTCTGCTGCAATTCAGTTTTTATAATGTT EMBV3_16783 TAGGTGCATGGTCTTCGGTAGTTGCAGCATGTGGGCTCCGCAGTTGTGGCGCATGGGCTT Gene BVV0102_205835 + 0 NULL GK000011.2:26174651-26177648 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024455 TCONS_00024459 TCONS_00024458 TCONS_00024456 1 XLOC_014512 Coding TCONS_00024459 XLOC_014512 Coding Coding ABCG8 11:26156647-26178118 j TSS17948 5574 1 TCONS_00024459_6 447 0.329924650161464 13 0.740987424312995 0.001038916431105 2.25016212436867e-07 2.15140808398747e-06 4.98473576432671e-08 0.000276796466643739 0.000644817168682076 0.000480723396762694 0.000475936451590447 0.000184362808806784 8.29828576476257e-18 2.91576577157239e-39 4.14350416723873e-06 0.000374032458987572 5.40145610377369e-05 8.08116214739587e-11 1.33807344132336e-90 0 0 0.000691995368105146 1.08938417521865e-06 0.000225621874618409 7.13801213154278e-06 8.51075998213699e-06 0 0.000778940284732573 0.000397166145748497 0.000512476607181535 8.07695738714915e-06 1.36753678467133e-06 0 XM_005212594.1 WHITE PREDICTED: Bos taurus ATP-binding cassette, sub-family G (WHITE), 0.0 3267 100.00 0.324721923214926 XM_005264483.1 WHITE PREDICTED: Homo sapiens ATP-binding cassette, sub-family G (WHITE), 0.0 1810 79.02 0.374058127018299 TCONS_00024459_6 sp|Q9H221|ABCG8_HUMAN ABCG8_HUMAN ATP-binding cassette sub-family G member 8; 0.0 689 80.34 0.926174496644295 1 coding 1 1 1 1 -0.37194647710098 0.263316552494452 0.00505809385207999 0.923991620248962 GGGCCCCATGGCAGAGGAGGCCCCAAAGAAGACAGGGCTAGAGAGAAGCACTGCTCCGCAGGATGACTTGGGCCTCCAGGACAGCGTGTTCTCCTCTGAAAGTGACAACAGCCTGTACTTCACATACAGTGGCCAGCCCAACACCTTGGAAGTCCGAGATCTCAGCTACCAGATGGATATGGCCTCCCAGGTACCTTGGTTTAAGCAGCTGGCTCACTTCAAGATGCCCTGGACATCTCACAAGGACTCCTGTGAGCAGGGCATTCAGAACCTGAGCTTCAAAATGAGGAGTGGACAGATGCTGGCCGTCATAGGGAGCTCAGGTTGTGGGCGAGCCTCTTTGCTGGATGTGATCACTGGGCGAGGCCCTGGCGGCAAGATTAAGTCAGGCCAAATCTGGATCAATGGGCAGCCCAGCACAGCGCAGCTGGTGAGGAAGTGTGTGGCCCATGTTCGCCAGCATGACCAGCTGCTCCCCAACCTCACCGTCCGGGAGACCCTGGCTTTTGTTGCCCAACTGCGTCTGCCCAGAAACTTCTCCCAGGCCCAGCGCGACAAAAGGGTGGACGACGTGATCGCGGAGCTGCGGCTGCGGCAATGCGCCAACACGCGCGTGGGCAACATCTACGTGCGGGGCGTGTCGGGGGGCGAGCGGCGCAGAGTCAGCATCGGAGTGCAGCTGCTGTGGAACCCAGGCTGGCCAAAGGCAACAGGCTGGTGCTCCTCTCCATCCACCAGCCGCGCTCCGATATCTTCGGGCTGTTTGATTTGGTCCTCCTGATGACGTCTGGCACCACCATCTACCTGGGGGCAGCCCAGCACATGGTTCAGTATTTCACCGCAGTCGGCCACCCTTGTCCGCGGTACAGCAACCCTGCTGACTACTATGTGGACTTGACCAGCATTGACAGACGAAGCAAAGAGCAGGAAGTGGCCACCAGGGAGACGGCTCGGTCCCTTGCGGCCTTGTTTAAAGAAAAAGTGCGTGGCTTTGATGACTTTCTATGGACAGCGGAGTCAAGGGAGCAGAGTGTGGGCACTTGTGTGCAGAGCCCGGCTCCTGACACCAACCTATTCCAGGCTCCCACTAAGCTGCCTGGCCCCCTACAGCAGTTTGCCATACTGATCCGTCGTCAGATTTCCAACGACTTCCGAGATCTGCCAACCCTCCTCATCCACGGGGCGGAGGCCTGCCTGATGTCCCTGATCATCGGGTTCCTCTACTACGGCCACGGGGCTATCCAGCTCTCCTTGACGGACACGGCGGCCCTCTTGTTCATGATCGGAGCTCTTGTCCCTTTCAACGTGATCCTGGATGTCATCTCCAAATGTCACTCAGAGAGGGCACTGCTTTACTATGAACTAGAAGATGGGCTGTACACGGCGGGGCCATATTTCTTTGCCAAGATCCTGGGGGAGTTTCCTGAGCACTGTGTCTACATCATCATCTATGGAATGCCCATCTACTGGCTGGCCAACCTGCGCCCAGGCCTCGAGCCCTTCCTGCTGCACTTCCTGCTGGTGTGGCTGGTGGTCTTCTGCTGCCGGGTCATGGCCCTGGCCGCCGCTGCCCTGCTCCCCACCTTTCACATGTCCTCCTTCTTCGGCAACGCTCTCTACAACTCCTTCTACCTCACTGGGGGCTTCATGATAAGCTTGGACAATCTGTGGACAGTGCCTGCGTTGATTTCCAAGGTGTCCTTCCTCCGATGGTGTTTTGAAGGGCTGATGAAGATCCAGTTTAGTGGGCACGCTTATTACATGGAAGCTGGCAACATCACCATCCGTATCCCGGGAGACATGATCCTCAATTCCATGGGCCTGAACTCTTATCCGCTCTACGCCATCTACTTCTTTGTCATTGGCATCAGTTGTGGCTTCGTGATCCTGTACTATCTGTCCTTAAGGTTCATCAAACAGAAATCAAGTCAGGACTGGTGATTCACACCCAGACTCCTGCCTGCTGGTGGGGGACTCAAGAAGGCCATTCAGCTGCACTCCCTTCCTCCCAAGGAGCCCCTTCCCAGGCACAGGGAGGACCCAGACAAAACTCCGCCACATCCGGTCCACACTGCTGCAGTGGCACAGGCTGGCCACAGGATGGCAGTAGAATAAAGACAGTCAAAAGGGATTTCTGATCACCAGCTGGAGCTTGAGTTTACTGGGAACCTGGAAACCATACCTAGGGGACACCTACAATGTCATTAATTTATTTCCTTTTGATGTATATATTTGTATAGGCAACTAATACAAGATGGGAGCAAATTAGGTGTGAATCGAGGAGTTAGGCCACGTGGAAACAGTAACGTAATAGCTAGCGGAGTATTTGGCCTCATCTTCCAGGCTCCCCAAACTCTGAGCCATTCTCAATACAGGAAATGACCTAAAACATACCAGCGAGATGCCATCTCTTCTTTTTGTGTGAGGTCTTGTGCTCCAAAAGCTAAACTGAACAATTAAATATTTATTGAGCAATTGCTCTGCGCCAGATTCAGGGCAGAACACTTTTTTATGTGGATCACGTTATTCAGTTCTCTGTTAAAACAACCCTTTGTGGTAGGCAGTATCCCATTTTATAGATGAAGAAACAGAGGCACAGACTGTCTACTAAGTAAGGTCACAGGCCTAATATATGGGGGAGTCACGTGAGGTCAGAAAGGCCTATAGGAGTTAGCGGGCAGAAGGCAAGTCCTGGGCCACTGTAAGGCTAGGAAGCCCAGGAGGTCTCCAGAAGATGAAGAGGTTTATGGACACTGTGGCAGCTCAGCCAGGCCTCTCACGGTACATCTCACCTCTCTGGCTGAGTCTCAGACCAGTCTGGAACCTTTTGCAGTGACTGGTATGGCCCTGGTCATGTGTTTCCTGTCTGAGCTTTGAGGACCAGCTGACCCAAAACAGGTACACAGAAAGTAAGGAGGAAATTATCCTCAAAGGAAAACCAGAGTGTGAAACAATAAGAAGGGGCAAGGTAGATGGTTAGGAGGCAAACAGTGAATGTTCTCCTCGGGTTTCCTAGACTATCCCTACTTGAAGTGTGAACCCTGGTCAGCAGCATGGGTCCTGCCTGGGAGCTGGTTAGACTGTCGGTATCTCAGGCACCAGCCAGACCCAATGAATCAGAATCTGTATTTTGGAAAGATCGCCCGGGCTTCCCTGATAGGCCAGTGGCTAAGAATCCTCCTGCCAATGCAGGGGACTCGGGTTCGATTCCTGGTTCAGGAAGCTCCCACATGCTGAGGGGCAGCTAAGCCCATGCGCCACAACTGCGGAGCCCACATGCTGCAACTACCGAAGACCATGCACCTAGAGCCCGTGCTCTGCAAAAGAGAAGGCCCTGCAGTGAGAAAGCCTGCGCACTCCCAACAGAAAGCAGTCTCTGCTTGCTGCAACTAGAGAAAGCCCACATGCAGAAATGAAGATCCAGTGCAGCCACAAGGAAATTAAGAAATACCTATATCCCTGGCCAAAAGTAAATAAATAGATCCCCAGGTGATCTGTATGTACATCCAGGCTTGAGCAGTCCCTAGCACACTTCCCTGATATAAGACATCCATCCAACTTGGGATATTCATGTTACACTGTAACACTTGACACGCGTCACTGTAACACCACACATGTGTCACTGTTACGTTGCCACCATCCCAAGGGCGGACCCCACTCAAGACTCATTTACTGTCCTGACAATGCCTGCATAGCAAAAGGAGCCAGGGCAGGACCAAGCATTGGATCTAGGCGTCAATTCACTCTGGTCTCTTTTAGTTTAGAATAATCCTCAACTTTCCTTAACTCCCATGACCTTGACACATGAGTGTTTTGTAGAATATCTCTAGATTTGGTTTGTCTGAAACGTTTTTATGATTAAATTCAGGTCATGCCCCTTTGGCGGGAGTATCACAGAGGACTGTGCCCTTCTCATTGCATCCTCTCGGTGGCATGTGATTTCAGTTTGTCCTGAACTGATGTTAACTTTGACCACCTGATCAAAGGAGTATTTGCCAGGCTTCACATGGTCAACAGTTTCCCCTCCTTTTGTAATTATTAATAAGCATTTGTAGGTAGGTATTTTAAAACTGCTCCTCAAATTTTCCATTAATTCATTTTAAAATTTATATCAGTATAAACCTGTGATTTTCTATTTTATTCAGTGGGCTGTAATCTTTTACTATCATTCTTAATTTAGATGTGCAAACTGTCCCTGACGTGGCCATGAGAGCCTCTTCAAGCTGGCTCCTGCCTCCTTTTGATAAGTCCTCATTCTCTGAACACTTTTGCAACTGTTTCAGACTCATCTTGTACTTTCCCACCCCACCACCCCTCAATCATGGAAGCAGACATTTCTCTAAAGAATCTTGGTTCCTTTCAGGGGAAAATGCCATTTAGAAGCCATTAGAAGCCAAGATATGAGTGATAAGTACGCTCATTGCCATTGGGGCGTCACTGTTTCCAGGCCCTCAGTGGGAATATATACATTTGCACGTGTACACACCAGTGAACCAGTGAAGTTGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGGACTGTAGCCTACCAGGCTCCTCCATCCATGGAATTTTCCAGGCAAGAGTACTGGGAATGGGTTGCCATTTCTTTCTCTAGGGGCTTTTCCCAACCCAGGGATCGAACCCAGGTCTCCCGCATTACAGGCAGACGCTTTACCGTCTGAGCCACCCGGGAAGCCTCTGTCCAAATTTTTATATATATTAATATTTTTCTCCCGCACCGATACATCCAATTCCAATCTACCACCATAGAGTGGATTCTTCTTCTCTTTTCACAATTGTAACTCCCTCCTCCCATTGTAGGAAACCTGGCTTTCACTAACCTTAATATTTTCGCTCATTTTGTTCATCTCCTATATATAACAAATCTCCCAACTACACTGTACTCCTTCGCCTGTGTGGATACCCTGCTAAGACTCTGACTCCCAAATCAAGCTGTCTCCAAGTCAGCAGAGATGCCCTTCTCACCCTACTCTGGCCCATCACACATCTCTCCCACCCCCATTCACAGCCCATAGCCCCCAGCACCCAGGCTGTGGTCACCTGGTGGCTTTAGGCCTGAATGGAGAAGGGGGAAGACCACGGGATTTTTTCTTTAACTCCCCAGTGATTCCAGCATGTAGGGGGAGTTGACGGTCACCAAGGTACATCATGTGATTTCATTCTGCAAAAGGTTTTAGTAACTCAGTGGGCTATGGTGTGCAGGACTGCGGGGTCACGGAACAAGGGGCAAGGTGCCAAGCAGAAGAGATGCAGAAACTCCAGCAGAACCTTTTTTTTCTCTCTCTGTATCCTGGAGCTTACTAAATACCAGTGTGCATGTACCCCCTCAGAGATTCGTTCCACTGGTCTGTTTTTAAAAATGCTCCTCAGGGGATGGGAGGCCAGGGAGAAGAACCACGGTTCTAGAGGCATGCACACAGTTCAGTGAGCCCTCCCTGCTCTAAAAGGGTAGAGATCTGCTTCTGTGTAATTATTAAAAGCAGGGGTTGTGACGAGAACATAGAAAACATTCCTGAACATAAATAAAAGCAATATTTTCTTAGGTCAGCC EMBV3_02919 GACAGCGGCGAGCAGAACTACGGAGAGCGGGTCTAGATCCAGAAGAAGTTCTCGGAGGCA Variant GeneID:615156|TRA2B:NM_001034776:129_cdna 170^303 2 EMBV3_28393 GeneID:615156 1 GENE TRA2B MGC128162 SFRS10 transformer 2 beta homolog (Drosophila) EMBV3_03083 CCAGGTGAGCCAGTCAATGATTTCTTCAACAGGGCTGCCTGCTAAGAGATGTGTCTTACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05962 CCGCGAAGACAGTACCGTTTCCTCAGCGGCGGACCGCTGCAGTAAGAATGTCTTTCCCCC Variant GeneID:540258|RBM25:XM_002690998:301_cdna 290^384 1 EMBV3_27214 GeneID:540258 10 GENE RBM25 NULL RNA binding motif protein 25 EMBV3_15543 CCCTCCTAAAGTTCAAATGTTCCTCGTGTCACCTTATCTACAACTAGGGAGGGTGCCTGC Gene BVT0102_038309 + 0 NULL GK000012.2:16889282-17884899 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036330 1 XLOC_021128 Coding TCONS_00036330 XLOC_021128 NonCoding Coding - 12:17269461-17270483 - TSS26477 1022 1 TCONS_00036330_1 79 0.264187866927593 1 0 0 0 0 4.0992875820258e-19 1.18364615358779e-11 0 0 0 3.96354113375231e-58 0 0 0 0 0 0 0 0 0 0 0.000654405423305572 1.83175341888398e-11 0 3.59062699020846e-05 0 3.67974645807795e-11 0 4.64073847125507e-62 0 0 0 XM_005211699.1 DNAAF2 PREDICTED: Bos taurus dynein, axonemal, assembly factor 2 (DNAAF2), 8e-09 66.2 100.00 0.0342465753424658 0 noncoding 0 0 0 0 -0.283374435093336 0.223425248828831 0.00483355101508525 0.920610959225952 AGAGTCGGACACGACTGAAGTGACTTAGCAGCAGTACTCAACCCTGAGGAGCCAGACCATGTCTTCCCAGCACCCTTGAGAAGCCTTTCCACAGACTGAGGCTAAGCAGGGACAGGGTGACAGGAAGCTTCGTGGAGGAGAAAAGAAAGGAAAAGCCTGCTGATGTGAGTCCCTGTTCTAGCCTCTGGTCTCTGGACCCTGCAGTAATTCCTTTGAGCCTGTGAACTACCCCTAGAACAATCAGAGGTACACATATCAGTAAATTGTATCCTTTCCTCAAGGTGTTCAGTCTGGGGAGATGAAAGAACCCGCCGGCTCTGGGAAGGAGGCTGTGGCAGGCACCCTCCCTAGTTGTAGATAAGGTGACACGAGGAACATTTGAACTTTAGGAGGGAAGAGTGGAGGGACTCCAGCGTGACTTCAGGTGTCAGGCTTCCTCTCTTCCTCTTGGTTGAGCCAGAGGAACTTTCTCTGTCTTAGAAGGATATTTTCCTAAACCCAGAAGCTGGTGACCAGGAATGAGATGTGGTGTCAGGGAAAGGAAAAATGAGGGAAAATTTATAAGAGATGAAAGAAAGAACTGCTATGTAGAATTTAATTCAACAAACCCTCATTTTTTTCTAGGCCTGAGGGATTCATTAGTAAATGACAATAGAAAAAGTCACTGCCATCAAACCTGTTATAATATCAGATGGGATAAATTCTGTAAAGAAACTGTCTTGACTGTTAGTCAAGGAAGGTCTATAGGAGGCTTTTAAGTCGACGCCTGAAGGAAAGAAGAAGAAAGGTAAAATCTGGAGACAAAAGTATTCTCAGGAAAGGAAACAGCTAAGGCAGAGGTCAAAAGAGGGGAGAAATTTGGTGTATTTGAAGAACAAAAAGTGAGTTGGTATGACTAGAAGGCAATAACATAGAGTACAGGATATTTTAACTTCACCATTGATGACACGAGCTAGATAATTTAAAGAAGATGTCAACTTATTAATCAGAGGTAATATGAAATCTCTCCATACTTGAGAATC TCONS_00036325 s 5' 380181 TCONS_00036325 s 5' 381202 EMBV3_34191 TTTGTAGATAATGTCTCTCTGGGGCTGCGATTGTCCCCTTCCAGCTCTGGCTGCCTATCA Gene BVT0102_080757 - 1 EMBV3_06876 GK000008.2:51722112-52196979 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00210234 TCONS_00206812 TCONS_00224113 TCONS_00066283 TCONS_00007677 TCONS_00197928 TCONS_00231338 TCONS_00229957 TCONS_00252235 TCONS_00116100 TCONS_00169197 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00038381 TCONS_00220662 TCONS_00122015 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00023373 TCONS_00252810 TCONS_00207069 TCONS_00078473 TCONS_00116172 TCONS_00175855 TCONS_00169198 TCONS_00252107 TCONS_00148280 TCONS_00175580 TCONS_00021569 TCONS_00176735 TCONS_00031939 TCONS_00239419 TCONS_00169199 TCONS_00039951 TCONS_00189891 TCONS_00155779 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00063181 TCONS_00009259 TCONS_00062744 TCONS_00111497 TCONS_00109027 TCONS_00020017 TCONS_00209636 TCONS_00155780 TCONS_00019961 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00039226 TCONS_00178325 TCONS_00233372 TCONS_00153218 TCONS_00040836 TCONS_00123168 TCONS_00240534 TCONS_00065823 TCONS_00140840 TCONS_00039904 TCONS_00085967 TCONS_00207755 TCONS_00199802 TCONS_00250246 TCONS_00020756 TCONS_00238327 TCONS_00249772 TCONS_00010471 TCONS_00021595 TCONS_00088088 TCONS_00199424 TCONS_00200529 TCONS_00056820 TCONS_00059708 TCONS_00071033 TCONS_00115148 TCONS_00198813 TCONS_00170823 TCONS_00116665 TCONS_00250726 TCONS_00249569 TCONS_00250579 TCONS_00142649 TCONS_00122313 TCONS_00249087 TCONS_00070810 TCONS_00131550 TCONS_00122479 TCONS_00007359 TCONS_00122686 TCONS_00218552 TCONS_00166449 TCONS_00152645 TCONS_00251929 95 XLOC_107421 XLOC_128744 XLOC_125332 XLOC_137409 XLOC_040997 XLOC_003238 XLOC_119588 XLOC_140827 XLOC_139451 XLOC_155176 XLOC_070269 XLOC_103305 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_022206 XLOC_133979 XLOC_073571 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_014040 XLOC_155751 XLOC_125588 XLOC_047361 XLOC_070341 XLOC_105634 XLOC_155048 XLOC_090162 XLOC_105361 XLOC_012242 XLOC_106509 XLOC_018184 XLOC_146085 XLOC_023768 XLOC_115928 XLOC_094822 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_037908 XLOC_004815 XLOC_037471 XLOC_067397 XLOC_064932 XLOC_010695 XLOC_128147 XLOC_010639 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_023044 XLOC_108098 XLOC_142854 XLOC_092983 XLOC_024650 XLOC_074722 XLOC_147198 XLOC_040542 XLOC_085269 XLOC_023721 XLOC_052005 XLOC_126270 XLOC_121454 XLOC_153189 XLOC_011431 XLOC_144994 XLOC_152715 XLOC_006022 XLOC_012268 XLOC_052875 XLOC_121077 XLOC_122181 XLOC_034623 XLOC_036490 XLOC_042806 XLOC_069449 XLOC_120466 XLOC_103665 XLOC_070831 XLOC_153669 XLOC_152512 XLOC_153522 XLOC_087074 XLOC_073868 XLOC_152030 XLOC_042587 XLOC_080255 XLOC_074034 XLOC_002920 XLOC_074241 XLOC_131872 XLOC_101287 XLOC_092410 XLOC_154870 Coding TCONS_00116100 XLOC_070269 NonCoding NonCoding - 20:15036325-15038215 - TSS86568 1890 1 TCONS_00116100_1 53 0.942857142857143 1 0 7.23702601438839e-05 7.81903247250879e-05 2.91580883523376e-05 2.70946455589632e-05 0.000106197122794357 4.73155178289295e-06 3.51606748361445e-05 1.99083743925294e-05 0.00016656296138986 7.27838927030585e-05 2.35454359518847e-05 2.36459519672901e-05 4.7022941607766e-05 0.000280078706620062 4.69513231971984e-05 0.00124429166142033 0.000393131041076018 0.00158052346381879 3.45945206859299e-05 1.34646954334181e-05 5.09961842555924e-05 0.000715515348527115 0.000359240541946966 0.000372632576743806 6.52504793542842e-05 1.78634451650475e-05 2.42064258047446e-05 0.000191924270836035 9.38028927268321e-05 0.000256353240131814 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 2e-75 288 98.78 0.0862433862433862 0 noncoding 1 1 1 1 -0.0633622171091176 0.579861142912628 -0.0149585236604085 0.812391044970016 CAGACGTGAAGTGAGCAAATGTGGGAATGAAAAATGATGCCAGTAGACTTGCTGGACCCAATGTGGCCAAAAGCCTTCAATTTGTAAAAACTACAGTAAAGTGAAGCACAGCAAACCGAGCTATGCCTGTACTGTTGCTTAAGCCACTTAGCTTGTGGTTTTTTGTTATGGTAGCCGAGCAAACTAATATGGGTACTCTCAGGCTCCCTCGTTGAGAACGATTTATAAAGAACAGTAAATGATTAATTTGATTTAAGCATGCATTTCATATGTGTGTTAGTCACTCAGTCGTGTCTGACTCTTTCTGTCCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCTATGGAATTCTCCAGGCAAGAATAGTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATTGAATCTGGGTCTCCTGCATTGCAGGCAGATCGTTTACTGTCTAAGCCACCAGCTTTTAAAAGTTTTATCTTTGGAGGAGGAGCCAAGATGGCGGAGGAGTAGGACGGGGAGAACACTTTCTCCCCCAGAAATTCATCAAAAGAGCATTTAAACGTCGAGTAAATTCCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAACCCAACTCTTCGAAAGGAGGTAGGAAAAAATATTAAAGACAAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCCGGGAAGGGAATCTTAAAAAGAGAGAAGTTTCCAAACACCAGGAAACCTTCTCACTGCCGAATCTGTGCCGAGCTTTGGAAGCACAGAGGGCAACATAACAGGGAGAAAAATAAATAAACAATTAAAACTCGCAGATTTCGAGCCCTACGATAACTCCCCCAGCGGAGAAGCAGCACAGACGCCTGCATCCGCCATTAGCAAGCGGGGGCTGGGCAGGGAGGCGCGGCGCGGGCTGCATCGCTGAGAGTAAGAATCTGACCTGAATACCCTGAGCGCTATCTGAGCGAAATAATTTGGGTTAGCAAACCAGACTGTGGGATATCTACCACGCGAAAAGCCAGTCCTAACCTAAAAACGTCAGGCCCGCGCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCTTCCCCCTCCGGTGACAGGCAGCCAGAGCCGGAAGGGGGCAATCGCAGCCCCAGAGAGACATTATCTATAAAACTGTAAGCGGGCTTCTTTGCTAACTAAAACTTCTTGGGGGTCTGGACGGTCAACATCTGCCTGAGAAGGTGCGCCGGTGTTACAACCAGAAAACCGAGTGGCAGGGAGGCGGTAAGTCGCAGCATTGGCGCTCGCCAAATACCTCATCACCTGAGCTGCTCGGACCTGGGAAGAGCACAAAACGCAGGCCCAACTGAGTCTGCGCCTCTGAGGACTACCCGAGTGCCTGAACCTGAGCGGCTTGGACCTGGGAGGTGCATGCAGCCCAGGGCCAGCCTCGGATTGTTCCCGGCGGAACAACCTAGAGCCCGAGCAGTGTGGACAGGGAGGCTACACGCGCCGTGAGTGGGGGCAGACCCAGGGTGGCTGAGGCACTGCGAGCCCACGCCAGTGTTATTTGTTTGCAGCATTCCTCCCTCCCTCCCCACAGCGCGACTGAACAAGTAAGCCTAAAAAAAAAAAAAAAAAAAAAAAGTGTCCTCCACCGTCCCCTTTGTGTCAGGGCGGAAACCAGATACTGAAGAGACTAGCAAACAGAAGAAGATATAACAGAGGGAAACGCCTTGGAAGCTACAGGCAATAGACCAAAACCCTGTGGTTACTACGGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGTCTGACCAAGGAACTAGCCAAAAATGAACTGAACACACAACAC TCONS_00114628 TCONS_00114629 . 3' 16523 TCONS_00114628 TCONS_00114629 . 3' 18412 EMBV3_28693 CTGTAAATCTTGTTATTTTTCTGGATAATGTTTAAGAAACTTGCCTTTCATCTTGTTCTG Gene GeneID:100336519|LOC100336519:XM_002688275:32_cdna Constitutive 2 NULL GeneID:100336519 6 GENE LOC100336519 NULL FIP1L1 protein-like EMBV3_34657 CAGTCTGTCCGTCATTACAGTGCTCAGGCTTCTCATCGTGGTGGCTTCTCCTGTTGCGGA Gene BVV0102_292117 + 0 NULL GK000005.2:101799617-101838634 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193021 TCONS_00193027 TCONS_00193025 TCONS_00193020 TCONS_00193024 TCONS_00193023 1 XLOC_117361 Coding TCONS_00193025 XLOC_117361 Coding Coding DPPA3 5:101792335-101800971 j TSS144352 2955 1 TCONS_00193025_1 183 0.396277495769881 4 0.65825130283729 0.00211390397223559 0.0019391905781527 0.00136451143075692 0.0012906011577786 0.0010640245311727 0.000645890713136998 0.00176425320079947 0.00223643082242777 0.00415518217484077 0.000211085993765628 8.85033710624735e-08 6.22625221826904e-05 0.000722417292713582 0.000879071771693253 0.000518972725411905 0.000314038771203089 0.00122881034266626 2.83384367772519e-06 0.00338126105061494 0.00384179554731186 0.000508423989872159 0.000521007899297732 0.00130231772218537 1.92346074054275e-11 0.00295137305454009 0.00278091909100716 0.00163481637049231 0.000621333069488899 0.000414574085015487 0.000276495774930953 NM_001111109.2 DPPA3 Bos taurus developmental pluripotency associated 3 (DPPA3), 0.0 2827 99.31 0.538409475465313 TCONS_00193025_1 sp|A9Q1J7|DPPA3_BOVIN DPPA3_BOVIN Developmental pluripotency-associated protein 3; 6e-71 216 84.73 0.693989071038251 1 coding 0 0 0 0 -0.48614231580288 0.319458331106865 -0.400078958486286 0.000623824126884994 TCCTCCTTGAACTCTAGCACTTTAAGCCCAGTTCACAAACCAGCAGCCATCTCTACAAGCAGAGTTTGAAAGCAATGGATTTTTCAGGCAACCTCAGGAAGACAGAACCACGGAGGCGCCTTGTAAAATCTCTACCCTACTTGACAGAGGGCATTATTACTCTCTCCTATTAGTCCCCTAATAGGACTACGCCCATTCACCTTATCCTTTTACTCATTAGTCATTTACATTAAAATAGGCTGGCTGATTGGCTTATCTGTTGTTTTTAGGAGGAAACAGGAGACTTTTACTCTCACCACGGCGTGTCAGCCTGGGTTTTTTTCCCCCCTTTCTTAGTTCTATAGTTCTTCCAGGCTTTTTTGGAGCAGTTTGAGCCTACAGCATCACCTTCCACTGGCACCCAAAGATCTAGGAGGAGCTTCAAGCTGTGACTAGACTTCCGATGGATTCATCAGAAGATAACCCAACCTGGACCCTAGAGTCTCTGAAAACATCCATCGATGACGCTTCCCAGGCAATGCAAGTTGCCACTCAACTCTCTGAAATGTTAGCAACGAACCTCAGTAACTTGACTCTCAACCCTAGTATCAAGTTGCCATATCTACCAGAATACCCATCTCAACTGACTGGGCAGTTACCTAGTGAGAAAACACCCCATAGGCGGAGAGGGGTAAGAACGGTGTTGAGTGAGCGGAGGTACAGGATGCAAAAGCTGATTGAATCTCTCAGACTTCGCTATGCCAAAGGAATTCCTCGTGTGAGTTCTGGTCTGACTCTCAAAGACAACTACAGCAGCAGGAGGACACTGAGATTCGATCAAGAGTGCGAAGATTCCAGTGTACCTGTAGTTATTGCCAGTTTAAGAGAAATCCTTCTGATGATAATTATGAGAATTATTACAACACAACATACAGTAATTATGCCATGGAATCGAATGAGTCATAAACCTTATTCTTGTACTGTTCTCTTGCTGGTAATTTTAGGATCATTATGAAGCAGCCTGGGAAAGATTGTACCAATATTTTGATAATATTTATTGTAAGTTTGTCTTTTTCACTTGCATCTCTTTCTACCTTAATACAGTTTTAACTTAGGAGGAATCTATATGTAGCTTGGAATTGAAATGACTTGAATACACACTAATTCCACTTTGATCTGACACCATGAAGTACTAATTAAGTCTCAGGTATTGCCTGTTTCTTAACCCTGAAGTTGAAACTCAATATCAAGAATTTGAAACAAATTAACTTGGGAAGGAATGTAAAGATAACATTGGCTGGTTTGACCAGAGCATTATTAGTGTGTTAAATAGTAATAAAATTTTTTGATGTGCTGTTTCAGTTTTCAGTAGCAAATAGATGTGTTTATAGAAGATCTTAATAAAACTTGAGACTTATTTGAGTAACTTTAAGATAAATCCTTGTTCTTATCTTAGACTTGTTTTTGCTAGCTATGTATTAAATGAATAATACTTACCCCCATCATGTTCTCAGGATGTAAATATATCTGGTGTTCTAATTTTTTTTTTCTTTTTTTTGGCATTCTAATATTTTGTGATACTGTCCTGTTGGGAATAAAGTTTACACATTTGAGGTAAGGTTACCAAACAGGTGCACTGATGTTTGTACATAGTATCCTCTTGGAAGAAGTTAACCAGTTGATGTTGTAAAAAGATATTAAAGAATTGGGGGTGCTTCCCTGGTGGCTCAGTAGTAAAGACTCCACCTGCCAATGCAGATGAAAAACATACACAGGTTTGATTCCTGGTCCGGCAAGATCCCACATACCTTGGAGCAACTAAAACCTGTGTGCCATACTCTGGACCCTGTGCTCTAGAGCCCAGGACCCACAACTACTAGAGCCTGCACCCTAGAGCCCACGTTCTGAAACGAGAGAGGCCACCACCAGGAGAAGCATGCACTCCGAAACTAGACAGTAGCTCCCATCAGGTGGCCAAAGTATTGGAGCTTCAGCTTCAGCAGCAGTCTTTTCAGTGAATACTCGGGGATGTTTCCTTTAGGATTGACTGGTTGGATGTCTTTGCAGTCCAAGGGCCTCTCCAGAGTCTTCCCCATCACCACAATCCTCTAATTTAGTCCCTCTCTGAAGTACCTGGGCAACAGATTTCCGGAATTATCTTGCAGATATAAAAGAACCTCACACCAAATGAAAGATGTTACTGCTGGATGACCACAAGCACAGAGCCCCAGAGACCCTGGAGCCTGATTATGTTAATCCCTGTAACACTGCTGGGACCCCTCTCCTTCACCTGGCATATTTTTTCCCCCCAACCGCACCTCCTTGCTTATGGAATCTTAGTTCCCTGACTTAGGGTTGAACCCAGGTCCTCACCTGGCTTCTAAAACTGCTCAGGGCTCCCCTGGTGGCTCAGTGGTAAAGAATCTGCTTGCCAATGCAGGAGACTCAGGTTTGATTCTTGGTCCAGGAAGATCCCAGATGCCTCAGAGCAACTAAGCCTGTGGGCCACAAATACTGAGCCTGGACTCTTAACTGCCAATTACTGAAAAGAGCAAGTGTTTGCTCAGTTGTGTCTGATTCTTTGGGACTCAATGGGCTGTTGCCCTTTAGGCTCTTCTGTCCATGGAATTCTCCAGGTAAGAATACTGGAGTGGGTTACCATTCCCTTCTCCAGGGGATCTTCCTGGCCCAGGGATCGAACCCAGGTCTTCTACATTGTAGACAGATTATCTTCTGAGCCGCCAGGGAAGGCTACAACTACTGAGGCCCAAAAGCTCTGGAACCTGTGCTCCGCAACAAGAGAAGCCACCACGATGAGAAGCCTGAGCACTGTAATGACGGACAGACTGTGCTCTCTGTAACTAGAGAAAAGCCCTTGCAGCAATGAAGATCCAGCACAGAGAAAAATAAAATTATTAGTCTTTAAAAAAAAAAAATCTGTTTCTTCTGCTCAGGGATTTTGAGACCATAAGCCAC EMBV3_16357 ATGTATGACAGTGAACTCTGGGCACCAGTCTCTGAGGGCCACAAATCCAGCCCTGAAGAT Gene GeneID:539321|SERTAD1:NM_001040564:709_cdna Constitutive 2 NULL GeneID:539321 18 GENE SERTAD1 MGC128632 SERTA domain containing 1 EMBV3_39957 GCTGGGAGGCCAAACACCCAAGCACAAACTGTCGTCTTTTTTTCCAAACAATTTAGCGAG Gene GeneID:615226|GRIK5:XM_002690152:2_cdna Constitutive 2 NULL GeneID:615226 9 GENE GRIK5 GRIK5 glutamate receptor, ionotropic, kainate 5 EMBV3_26052 CAGCCACCCCCTCGTTCTGCTGGCCAAGTGAGCTGTGACTGTGTACGACAAGCCAGCATC Variant GeneID:507210|ALG1:XM_002697956:662_cdna 557^646 1 EMBV3_15719 GeneID:507210 25 GENE ALG1 NULL asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae) EMBV3_36656 GTACCAGCACTTCCTGTACCTGGGCTTCGATGAGGCGAAATTTGAGGATGACATCAGCTA Gene GeneID:515133|ECRG4:NM_001038113:83_cdna Constitutive 0 NULL GeneID:515133 11 GENE ECRG4 MGC134412 esophageal cancer related gene 4 protein EMBV3_09995 GTCAAACGCCTTCCTATCAAGCGCCACAAGGTTTGAGAACATGTCAGAGAAACTTCAAGC Gene GeneID:281429|PRP1:NM_174159:20_cdna Constitutive 0 NULL GeneID:281429 23 GENE PRP1 NULL prolactin-related protein 1 EMBV3_21799 CTTAGTGCAGCCTGAAGGATCAGTATAGTAATGCCAGGAAAGTGCTTTTTTAAGACTTCC Gene GeneID:539529|UBQLN2:XM_002700163:78_cdna UTR3_Alt 1 NULL GeneID:539529 X GENE UBQLN2 NULL ubiquilin 2 EMBV3_03799 GTCTTCTACTGCCCTACAGCTACAGAGCAGTTTTTGTGGTTCTTGGAACTTGTATTGCAG Variant GeneID:504650|CEPT1:XM_002686145:258_cdna 493^640 4 EMBV3_22708 GeneID:504650 3 GENE CEPT1 NULL choline/ethanolamine phosphotransferase 1 EMBV3_04035 GTCAGCAACGAGTCCACATCGTCCTCGCCCCCAAACGTGTTCTTTTGTGTGATCAGGTAT Gene GeneID:507393|PEX14:NM_001080237:40_cdna Constitutive 0 NULL GeneID:507393 16 GENE PEX14 MGC140441 peroxisomal biogenesis factor 14 EMBV3_21412 AGAGCGAGACTAAAGACGTAGGAAGCATGGTGCCCCTCTGACCGTTTCACCAAAGATCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22494 GTCAACACTCCATGTGTTTTCAGGATGGAAGAAAAGTTCCTGTTGCAAGGAGAGTCTACA Gene GeneID:533660|DNAJC18:NM_001015649:5_cdna Constitutive 2 NULL GeneID:533660 7 GENE DNAJC18 MGC129069 DnaJ (Hsp40) homolog, subfamily C, member 18 EMBV3_01103 GATAAGCAATGTACCCATTTGGCAAAATTAACAGAGACATGACAGACCAGGAGATGTTTG Gene BVT0102_249449 + 0 NULL GK000021.2:56834938-56883744 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18558 CGCACCTAGAGAAACCCCAGGAGCAGCAACGAAGACCGAGCACAGTCAAAAATGAAGCAA Gene BVV0102_228023 + 0 NULL GK000018.2:57364099-57391816 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087190 TCONS_00087191 1 XLOC_052383 Coding TCONS_00087190 XLOC_052383 Coding Coding KLK5 18:57387656-57401354 j TSS64767 1055 1 TCONS_00087190_2 127 0.474881516587678 3 0.923194860188362 0 0 7.01720169593101e-05 9.4454401308896e-05 7.01965463975967e-05 0 6.08043312566185e-05 7.28824768793791e-05 1.49571922058752e-05 5.0328903141725e-21 2.50922543086223e-14 0.00015929578429742 0.000310275669879411 3.33832914817397e-05 0.000448120740989924 0.00218293139215381 7.57229504969547e-27 0.00194366439899625 0.000237898553107921 1.36326987674132e-05 2.30196761520345e-05 0.000255429056205253 4.97428833174835e-09 0.00118120236160504 0 0.000133562960928295 0 0.000200297171653941 0.000303700323245505 0.000125373961067436 XM_005219363.1 KLK5 PREDICTED: Bos taurus kallikrein-related peptidase 5 (KLK5), 4e-171 605 100.00 0.316587677725118 NM_012427.4 KLK5 Homo sapiens kallikrein-related peptidase 5 (KLK5), transcript 6e-67 259 77.18 0.314691943127962 TCONS_00087190_2 sp|Q9Y337|KLK5_HUMAN KLK5_HUMAN Kallikrein-5; 8e-44 148 64.29 0.874015748031496 1 coding ATGGCCGCAGCAGGAGCCCCCTGGTCCTGGATGGTCCATGCCCTAATCGCAGCCCTGATTCTGGGGGCGAAAGACCCGGTTCTTGGAAACGATGTGGCTTCCTGCGACGACCCGTCTGCCTTCGGGCCCTCTGGGAGCACCCCGGACCTCAGGCCTGGAGCGACGGAGGACACCCGGGCGGATGAGAGCAGCAGCCGCATTGTGAATGGGACCGACTGCGAGAGGAACAGCCAGCCGTGGCAGGCTGCGCTGTTGGTGAGATTCAACAAGCTCTACTGTGGGGCCGTGCTGGTGGACCCGCAGTGGCTGCTCACGGCTGCCCACTGCCGCAAGCAGCATGGACTTCCAACATCTGGGCTTGAAACAGAGAGAATAAAACCTTAAGTGTCGGGGCTTCCCTGAGGGTCCAGTGGTTAACAATCCGCCTTGGAATGCAAGGGCCACCGGTTCGATCACTGGTCTGGGAAGATCCCACGTGCCGCGGGGCAACTGAGCCGGAGCACTGCAACTGCTGAGCCTGCCCGCCTAGACCCCTGTGCTCTGCAACGAGAAGGCACCGTGGGGAGAAGCCTGTGCGCCACAGCTGCACAGTAGCCAGCACTTGCCGCACCTAGAGAAACCCCAGGAGCAGCAACGAAGACCGAGCACAGCCAAAAATGAAACAAGTAAATAAATGTATCTTTTAATAAACCTCAAGTGTCTGAGCTACTGGAGTTGGTTTTTAGTATGCTGATACGGAGGAGATGGTGGGGAGAAAAATTTCCAGGAACTAAAAGCCAGTAAAGACGTTGCGCAGATTTTTCTTGGCAGGTTCGACTTTCTCTTCCTGAGTAAGGATGTGTCTTTTCCGACGGGGAGGCCAGGATGGGGCAGGCGTCAGTAAACAGTTCCCATGAAGGGTGGAGAGGATCAGTGTGTTTCCTGCACGGTGATGTAAGCGGTGAGAATAGAGTTATGGTGGTGCAAGAAATAAGCTTCTTGCCCTACTAGACATACTGCAAAACAAAAGGAATGTATTTTTTAAGTGAGGCATTAGTGAAAGAACAGATAAATGG EMBV3_17955 CATCTCACTGCTCGCCTGGAGGATGGTTCAGAGATGGGTTAAAGCTGGAGAGAAACCAGA Gene GeneID:516915|CD300A:XM_002696218:289_cdna Constitutive 0 NULL GeneID:516915 19 GENE CD300A NULL CD300a molecule EMBV3_01059 AACGCAGCCGTGGAGAGAGAAGAACAAAAGGAACCTTGGATAAGCATAAAGAGCTGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37641 GAAGGGCAGGGCGCCCTGGAATGGGTTCGCCCCTTGAAAATCCGGGGGAGAGGGTGTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21136 TGCAGCTGGATTTCCGTACACCTCCAGGTTTTGATCGGACACGTAATGCTGAGATTGGAA Gene GeneID:504474|STT3B:NM_001097570:41_cdna UTR3_Alt 2 NULL GeneID:504474 22 GENE STT3B MGC152029 STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) EMBV3_32256 GAGCCATGAGGTACGGCAGCAATGGAATTTAGTCAGGCAAATTTATGGTGCCAGCAGAGG Gene GeneID:539458|FOXJ3:NM_001076162:257_cdna Constitutive 2 NULL GeneID:539458 3 GENE FOXJ3 NULL forkhead box J3 EMBV3_13689 ATGAGTCGCACGCAGGCAAGGTGGTGCTGCGGAGCTGGTATGAGAAAAACAAGCACATCT Gene GeneID:515539|FAM50A:NM_001034496:58_cdna Constitutive 0 NULL GeneID:515539 X GENE FAM50A MGC128215 family with sequence similarity 50, member A EMBV3_38420 TGTTTCCACAGAAGCACCGCCTATCATATTTGCCTCCGTTTGTTGGGCAGTTTGTTTCAA Variant GeneID:540225|COX7A2L:NM_001034695:158_cdna 163^865 2 EMBV3_35655 GeneID:540225 11 GENE COX7A2L MGC127892 cytochrome c oxidase subunit VIIa polypeptide 2 like EMBV3_18192 TGCCCCACACTACACCTGAGCTGCAAAAAGGGCCATCACCAATAAATGCTTTCAGCAACT Gene GeneID:541118|TNRC6A:XM_002698027:226_cdna Constitutive 1 NULL GeneID:541118 25 GENE TNRC6A NULL trinucleotide repeat containing 6A EMBV3_17310 GAAAGCTGTCATCTATAGGTTTCTTCGACTTCATAGCGGCCTGTGGCTAAGGAGGAAGGC Gene GeneID:540278|MRPL35:XM_002691361:207_cdna Constitutive 2 NULL GeneID:540278 11 GENE MRPL35 NULL mitochondrial ribosomal protein L35 EMBV3_00151 ATGCCTAAGAAATGTGGTGCGACGAACAAGATGTGACAACCGAGGCTGTGAGTGTAGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01470 AGATACTCTTTTAGTCATCTTTGTTTCTCCTTAGCAGAATTCCTGGCATGTGGCAGGTGC Gene GeneID:788719|FMO5:NM_001101304:7_cdna Constitutive 2 NULL GeneID:788719 3 GENE FMO5 NULL flavin containing monooxygenase 5 EMBV3_28276 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22521 TGGAACTCATGGAAGGGGGTCTCGAGAGAAATGCCTGATCCAATCAACCCCACCTCTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08004 AGAACTTCGCCCCCAGCTTCAAGGAGAGCGAGATGAACGTCATCGCCGCGGACATGTGTA Gene GeneID:528023|NACC2:XM_002691615:260_cdna Constitutive 0 NULL GeneID:528023 11 GENE NACC2 BTBD14A NACC family member 2, BEN and BTB (POZ) domain containing EMBV3_18240 CTCCTGATATACAGAGACCTCAGCACTTTCGCCTTTGCTCTGTGACTGGGGAGGGAAAAC Gene BVT0102_091629 + 1 EMBV3_02264 GK000013.2:54931311-54936106 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045598 TCONS_00045599 TCONS_00045600 TCONS_00045602 TCONS_00045601 1 XLOC_026480 Coding TCONS_00045599 XLOC_026480 Coding Coding C13H20orf11 13:54934402-54942163 j TSS33242 3098 1 TCONS_00045599_1 228 5 0.601417525773196 0.00186758040015094 0.0023403961613078 0.00308629777773843 0.00158106939589067 0.00037172715658747 0.000548315530412624 0.0014493945054053 0.00170957447592371 0.00285670183518094 0.000428665177541545 0.0001652114076133 4.41001659770739e-08 4.40895547199662e-09 0.000446940610326653 0.000273556262509343 0.000474920922095147 8.73067887039543e-05 0.000625558075186807 0.00127222403253572 0.000118490894705519 0.0003339550525636 0.000499909616250755 0.000733927392672338 0.000544214166433919 0.00236443604067295 0.00146189540156176 0.000225222066929896 0.000241386144927501 6.30297802275114e-09 0.000524730280455097 XM_005214556.1 GID8 PREDICTED: Bos taurus GID complex subunit 8 homolog (S. cerevisiae) (GID8), transcript variant X1, mRNA. 0.0 5579 100.00 0.998063266623628 NM_017896.2 GID8 Homo sapiens GID complex subunit 8 (GID8), mRNA. 0.0 955 83.19 0.290187217559716 TCONS_00045599_1 sp|Q32L52|GID8_BOVIN GID8_BOVIN Glucose-induced degradation protein 8 homolog; 2e-167 466 100.00 0.995614035087719 2 coding 1 1 1 1 0.108692010499841 0.553034018500088 -0.0289903954485671 0.552777026385724 CGGCCGGGAGGCGGAGGGCCGGACTCTGGGGTCGTGGCCAGGAGGGATCGAGGCGGGCCGAAGTAAATCAGAATGAGTTACACAGAAAAACCCGATGAAATCACAAAGGATGAGTGGATGGAAAAGCTCAATAACTTACATGTCCAACGAGCAGACATGAACCGTCTCATCATGAACTACTTGGTCACAGAGGGCTTTAAGGAGGCAGCGGAAAAGTTTCGAATGGAATCTGGGATTGAACCCAGCGTTGATCTAGAAACACTTGACGAGCGAATCAAAATCCGTGAGATGATACTGAAAGGCCAGATTCAGGAGGCCATTGCGCTCATCAACAGCCTCCACCCAGAGCTGCTGGATACAAACCGCTATCTCTACTTCCATCTGCAACAACAACACCTGATCGAGCTGATCCGCCAGCGGGAGACGGAGGCAGCGCTGGAGTTTGCACAGACCCAGCTGGCTGAGCAGGGTGAGGAAAGCCGCGAGTGTCTCACCGAGATGGAACGCACACTGGCCCTGCTGGCCTTTGACAACCCCGAGGACTCACCCTTTGGAGACCTGCTCAACATGATGCAGAGGCAGAAGGTGTGGAGTGAAGTGAACCAAGCTGTCCTGGATTATGAGAATCGTGAGTCAACACCCAAGCTGGCAAAGTTGCTGAAACTACTCCTTTGGGCTCAGAATGAGCTGGACCAGAAGAAAGTAAAATACCCCAAAATGACAGACCTCAGCAAAGGCGTGATTGAGGAGCCCAAGTAGTCTGTGCGGGGCCCCGCCGCATGGCCCCGGGCCCGCGGGCGCCACCTGGGACTGAAGATTTTTACGGCAGCAGAGAACTCTCTTCTCCCTTCTTTTACTGTTTGTGTGTTTTGTTTTGTTTTTGACCCAGCATCATTTTGAAAGGGAAAAGTGGCCCTTTTAAGCACTGGAAAACTCCCAGTGCAAGATACCGTCTCTTCTGGAAGGCCGGCAAGGACTGCCCCATGGCCTGTGCTCAGCGTTCTGGGCGCTTCAGCTCCTGAAGGCGCCTCATCTTAGGGCCGCTAGTCCACTCGAGGCCCCGCTCAGAGCACGGGGCAGCACTGATGACCGTCTCACTCTGTCAGCATCCAGGAGGACAGCGTGTCCTCCTCCCCCCATCTCGGCCGGCCTTCGTGTAGAAGTGTTTTCTTTCCCTCTTTGGTTTTTGGTTTGTTTTGGTTTTTTCATAGGAAAGACTATATGAATTTGTAAATCCCAGTTCAAAGACTTCTTTTGTGCGCGGGCACTAAGTTTGGTTGTCTTCCTGTTTGGTCTGGGTCGTGTGGCTTTGGGGGAGATGGGTGTGTGCGTGTGTGTATGCGGGGCGGGCTGTGTGTTTTTTAATTTTTTAAATATATATTTTGGTGCTGTAAGTGGTGAGAGACTCTTTCCTAGTGGATCAATGAACCATCTCTCCTGGGCACTTTTGTTGAAAATAAAGGTTTCTCCTTAATTTCAAGAATGACCACAGTGGTCTCTCAGAAGTATTCATCATCTCAAGCACAACTTTTGCTTTTGGAGTGGCTTCCCCGGGGTGACCATAGTGACGCTGTCTGGTACCTACAGCCAGAAAGGGACAGCTCCCGGTGACACGTGACAGTGCCAGGCATGTGCTATGGTGCAGTGAGCTCTGTGACCCACACTTTTGCCTCTCGCTCTGTCAGCCAGTCTGGCAGACGTCCAGCTCCTATTCCCTCATGTCTGTCCCCTGCCCGGTGCCCACTGCCGTCAGTGAGTCCTGAGTGCAGGCTCAGGTGTTGGGGTTTGGGGCAGGTGGCCCAGGGTGCCAGTGCAGAGCTGCTGGCCCTCAGTGAGACTGGTGGAGGTAGAGGGGCCCTGGCGTGCAGAGCTCCCCAGGGCTGATGACCCCCATACATCCTCTGGTGAGAGCACCTGCATGGCTGGGATTCAGTTCTCACCTGATCCCTCCCACAGGGTGGGTTGTGCTGGCACCTGGGCTCTGCAGAGATGCACGCCATCAGCAGCCAAATTGAGAGAGTCTGTTGGCCTTGGTGCTCGGCTGGGTAGGTCTTTGGGAAGGTCAGGTCTTCTCCGGCTGCGGGGCGTCTTCGTCACATCCCCATACACTCAGTGTTTGTCCCGCAGGGTCTGTGGCTTCAGCTCCTCTCCCCACTCACTTCCGGCTGCACGTGGAGGCTGCAGGTCGTTGGTTTTCAGTGGGTACAGCTTCAGGCAGAGTTTTCCCTCCCCAGTCACAGAGCAAAGGCGAAAGTGCTGAGGTCTCTGTATATCAGGAGACCGTCAGGCCCTGGACTGGCCCTTACCGTGGCAGTGATGAGCTTCAGCTCTGTCTCAGTCATCAACTCAGATGTGACCTTTCTGTATGATCATTTCCTCTTAAGATTTGGGAATAAAAGTAGGGAGAAAGGGGCCTTTAATCTTCAGGTGATAGTTAAATACAGCAGAAGCTGAAGAAAAATATTAGGGAAGTAGAGGTAAAACTACACTTTTCGAAAAGCACGAAGTAATTCAGCATATTCCTATCCTTTACTATTAGTGTATATAAGATAATTTATGTGCATCATTAACATACAATCAATCTGACATTTTTCAAAATAGTGGGTTTGAGATGTATGTTACCGGGTAAGAACCATCCATGAACCATGGGGACCTGTGGAGGGCCTGTCACGTGTAGGAAGTGCTGTCGAATGCTTCAGAGAAGTGCTGCTGGCTTGTCCATCATTTAGTCAGTGAGGGGCTTGACCAGTGAGTGCAAAGACCCATGTGAGCTGGGTGCCAGTGAGATGTGGAGAATTCAGATGGTGCTGTTGGGTTCTTTCCCTGTGTATAAAGAGTGTGGTTCCTTCCCCATAGGCTGGAAATCTTTAAAGGGGCGGCTTTGCAGACTTTTCTGTTTCCTCCTTTTGCAGTCTTATTTTTTTCAGCAAGCATTTCAAGGTAATGAACATTAAGTATATCGATTTTTCTACTTCATCTCATTTGGATCTCGCTGTGATGTTTGTTAAAATGTGATGTTTTACCAGGGTAGTTTATGTCTTCTTTTTTACACTTTCTGGTGGAAAGTGCCTTGAAATAAATAAAACGTGACAATATTT EMBV3_26973 GCACGACTCCAGATTACTTCCTCCTTCAAGGTACTGCTTCTCTGAGATGGCCCCAGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17563 CCCTGGGAAGATGTCTGTAACTCCCATATTTGTCCTAAGAGTCTGCATGGTCTGGGTGTG Gene GeneID:532719|GDPD5:NM_001101141:25_cdna UTR3_Alt 3 NULL GeneID:532719 15 GENE GDPD5 NULL glycerophosphodiester phosphodiesterase domain containing 5 EMBV3_06641 GCAGAAATGAATTGTATTTTCATTATCATTGTATTATCATTACTGGAGGTAATGACCCTC Gene GeneID:100336430|LOC100336430:XM_002694636:11_cdna Constitutive 0 NULL GeneID:100336430 17 GENE LOC100336430 NULL hCG96018-like EMBV3_10159 ATCATTTCCCAGGATCTGAAGACAGTGACGCTGAAGCCGGTTCCTCAGAGAGTCTGCGCT Gene GeneID:517666|TRIM31:XM_002697360:349_cdna Constitutive 0 NULL GeneID:517666 23 GENE TRIM31 NULL tripartite motif-containing 31 EMBV3_25437 GTTCCAGAACCGCAGAGCCAAGAGAATCAAGAATAGAAAGCCAGGAAGCCTAAGCCCCAG Gene GeneID:618142|SEBOX:XM_002695744:437_cdna Constitutive 0 NULL GeneID:618142 19 GENE SEBOX NULL SEBOX homeobox EMBV3_19180 ACTTGAACATTCCACCTGAGCTGGGCTCGCCTTAAATTCCTCATTCCTCGTTGTACGCAG Gene BVV0102_310786 - 1 EMBV3_37467 GK000005.2:1321240-1361979 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193821 1 XLOC_117599 NonCoding TCONS_00193821 XLOC_117599 NonCoding NonCoding - 5:1361121-1361799 - TSS144777 590 1 TCONS_00193821_1 86 0.305084745762712 2 0.131462333825702 0 0 0 0 0 0 0 0.000120299275152884 4.01194129171791e-05 0 0 0 0 0 0 0 0 0 0 0 1.02905727099273e-05 0 0 8.52438625544291e-05 0.00051669888435957 0 1.98615533326948e-05 0 2.46844377800924e-05 0 0 noncoding 0 0 0 0 0.0747056883811401 0.596493125157233 0.0268214087530427 0.586750657614948 GCGGGCCGCCACATCTCTGCAGCTGGTGGGAGCCTGCGTACAACGAGGAATGAGGAATTTAAGGCGAGCCCAGCTCAGGTGGAATGTTCAAGTACACAATGTTCTCGTTCTTGCCCAGGGGATGTTCAGAGGCTAATGACCTCTCCCTTCCGGAGGTCCCGTTCTCCAGACCACCTGGACTCCTCCTTAAATTTCAGTGTCTCACCTTAAACCAGAAGGTTTCCTGGATCATCCCATCTTTTTCCCTGTCATTTCATCTCTCTCCCCACCGGTGTATCTTCTCTAGCCCAGCTTACCATACTTCGTGGAAATTACCATGTTCAATATTTGTCTTTCCTTATTAGGCTGTAGACTTCTTAAAGACAAGAACTGTGTGAGACTTGCCCACCCTTGAGTTTCTGACCTCAGGTGCCAGACACATTATTAGTATTCTATAAGTATTTGGGGAAGGAATGAATAAATTGTACCTCTCAGGCAGTTATGCCTTGGTTTCCCATTTTTTGCTGTCTTTCATGAAGCTTTTTCCACCATGAAACTTTTGACATTCCATGTTGACTCCGCCTTGACAAGCTTGTCTGATTTGATGATTT TCONS_00190712 r 5' 367 TCONS_00190712 r 5' 118 EMBV3_20635 CCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGACGTGCTGAGAAGCAACCTGGTGCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29818 AGAATGCCCTGTTTTTATTTGGCCCATGAGCTGCGCCTGAATCATCTAAACCACCCATGG Gene GeneID:534852|FBXO4:NM_001034617:74_cdna Constitutive 0 NULL GeneID:534852 20 GENE FBXO4 MGC127616 F-box protein 4 EMBV3_34972 GACTCCAGGAAGCTAATCACTCGGAGTTATATATCCACATGTTGCTAGAGGGGCTTAGAG Variant GeneID:525680|UXT:NM_001037471:87_cdna 233^430 2 EMBV3_26452 GeneID:525680 X GENE UXT MGC133475 ubiquitously-expressed transcript EMBV3_06239 CACCCAAATTCTAGCTTAAACAACTGAGCGTAAGCAAGAGAAGACTCTCCAGCAGATGCC Gene BVV0102_059410 + 1 EMBV3_26128 GK000005.2:37604225-38269276 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21043 CCACGGTAGACGGCAAGACCGTCCTTGTGGCAGACATGAAGATGACCCAAAAAAGTTTCA Variant GeneID:515671|RABL2B:NM_001034508:43_cdna 284^475 3 EMBV3_03263 GeneID:515671 5 GENE RABL2B MGC127908 RABL2A RAB, member of RAS oncogene family-like 2B EMBV3_01896 CAGAGTGAAAACTGCAGCAAAAAATACATGTTTCCTTACAGATTCCAGAGAATGGATTCA Variant GeneID:507280|TM4SF18:NM_001034287:17_cdna 308^450 2 EMBV3_11429 GeneID:507280 1 GENE TM4SF18 MGC126972 transmembrane 4 L six family member 18 EMBV3_43637 CAAACTGCATCCAATCACCATGCCACATGCAAAACTACACACAGGTTATGATAAGAAGCG Gene GeneID:408007|P2RY12:NM_001001174:14_cdna UTR3_Alt 1 NULL GeneID:408007 1 GENE P2RY12 MGC139385 purinergic receptor P2Y, G-protein coupled, 12 EMBV3_17626 CTGCGAGGCCGCCTGGAGAGGCTGGAGCAGGCTCCTGTGAGGACAACAGCCTGGGCCCAG Variant GeneID:782820|EGFL8:NM_001099187:222_cdna 764^917 1 EMBV3_17905 GeneID:782820 23 GENE EGFL8 MGC165955 NG3 EGF-like-domain, multiple 8 EMBV3_19530 AGCAGATCAAGCGGGTGAAGGACTCGGATGACGTGCCCATGGTGTTGGTTGGGAACAAGT Gene GeneID:100298939|LOC100298939:XM_002699432:117_cdna Constitutive 0 NULL GeneID:100298939 29 GENE LOC100298939 NULL similar to v-Ha-ras Harvey rat sarcoma viral oncogene homolog EMBV3_24827 TCAGGCCTGAGAGTTAATATTTGTGCGGGCACCGCAGGGACGGACCGGCTCTGGTAACAC Gene GeneID:100300008|LOC100300008:XM_002691686:109_cdna Constitutive 0 NULL GeneID:100300008 11 GENE LOC100300008 NULL similar to reticulon 4 receptor EMBV3_29403 AATATTCAGCTTTGCCAGGTACGGCACGGACTTCTACAGCTCACACTACAAAGGCAAGCT Gene GeneID:515126|AMZ2:NM_001034481:19_cdna Constitutive 2 NULL GeneID:515126 19 GENE AMZ2 MGC127801 archaelysin family metallopeptidase 2 EMBV3_39283 GTGAGGGAGAGGACACGCCAGACCTCAGAGCAAGTCCAGCATCTCCTTCTACTAAGAGGC Variant GeneID:618512|HN1L:NM_001081546:309_cdna 399^549 3 EMBV3_17503 GeneID:618512 25 GENE HN1L NULL hematological and neurological expressed 1-like EMBV3_31361 TCCTGGAGTGGGGTAGTCCTACTTCTCTTATCTGGTCACCTTCCCTGTTGAAATGTGGAC Gene BVT0102_036523 + 0 NULL GK000018.2:21120353-21623199 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013499 TCONS_00013500 TCONS_00013502 TCONS_00013501 TCONS_00013498 TCONS_00013503 1 XLOC_008142 NonCoding TCONS_00013499 XLOC_008142 NonCoding NonCoding LOC100847604 10:36873932-36888205 = TSS10012 2084 1 TCONS_00013499_1 200 5 0.854330156950673 0.0026125440905847 0.00155987073313202 0.00134814041301958 0.00113526133336787 0.00181494285805412 0.000350010053091665 0.00274689373545908 0.00379275164314332 0.00413536082745464 0.00378100834002271 0.00064324481254012 0.00104530648165704 0.00110083491261597 0.00229510246509594 0.00111705991164799 0.0176370857780973 0.0109541555404618 0.0141139736792977 0.00095983313177568 0.0010541101862648 0.000741737825896556 0.00988575511424408 0.00761631850456016 0.0126679019916798 0.000920132069688663 0.00250103472170525 0.00129472184470819 0.00354185577189955 0.0024863662476894 0.00504146548342404 XR_225955.1 LOC100847604 PREDICTED: Bos taurus uncharacterized LOC100847604 (LOC100847604), 0.0 3384 99.95 0.901151631477927 XR_243125.1 OIP5-AS1 PREDICTED: Homo sapiens OIP5 antisense RNA 1 (OIP5-AS1), transcript 7e-121 439 76.42 0.313819577735125 0 noncoding 0 0 1 1 -0.0863391843257166 0.593049225818389 5.38398840775889e-05 0.999170005677095 ATGGAGAATGGAAAATGTCCTTGGATTTTGGCAATTAGGATAACGCTGAGAGCATCCAAGGTTTTGAAAATTAAGAAAGTATTTTTCCCTATTACCTCATACCGGAGACGCAACCACAGGCAAAAACAGGCCGAAAGAGTGGGGCTAGAGCTATTGATTGACACACATTCCAACCAACCTACAACGGAAGAAGAGCGCGCCTGCGCAAGGGGCAGGCCGGCCCCCGGGCGCTGGAGTGCTTCTGCCGGCCCGTGCGAGGAAGAACAGTTTCCTTGCCATTTAGGTGCTTTTATATTCATCTCAAAAAGAAAACAAAATGCTGAACTCGGGATTTGGCAAGTATTTCTGCATTGTCTCCTGGAGTGGGGTAGTCCTACTTCTCTTATCTGGTCACCTTCCCTGTTGAAATGTGGACGTCTCTTCTCTATACTTTGCCTCCATGACTTGGACTGGAAAGGCTGCTCTTCTTTTTGCTGCCCACTCAAATTCAGCACAGAAAAGCCCTGGGGTAGAGTCATTCCGCCAGATTCTCCTGGAAGAGAAGCGACTGACATATATCTTCAGCTGCTCTTTGCTCAATCAGAAAGATATTTCAAAAGCTGAAGGCTGATGTCTGGTTTGAAACAGATGCTTTGATGGTGATATTTGTGAATTCTTTACCTTTTGTTCCAAACAAGAAGACTGAATATAAATAGCAGGTATCGGTATGACATCAGGGTTTGGGGGTTTTTTTGTCTTCCAGTTTTAATCACTATCATGATAAGCACAGTTGAGACTTGCAACAGTAAATTCCAGATATATGTTCTAATGTGAAGTGAAAGAGATGCTTAAAGAGATGGCTTACATATGTATCTAAATCCTGGCTTATCCTTTGACATGGATTTACTAGATAAGAACAAAGGTCCCATTTTGCAATAAAACTCTTGATGTGATAAAGAAGTAAAAAGACAAGATATCACAAGGTTACTTCCATATGTGAATAAACCATCACAAACCTATAAATAGCTATTTTTACATATGTAAGCCCACAGTTTGGGATGATAAGAGGAATTTTTCTCCTGGAGAAGGAAGCTGTGGTTGACTTCATTCTCAGAAATCTTTGGGTATTTGATATTTTTAAATGTTTTTTCATTCATCTAAGGAATGACCACATTGTGCAGATGCTAACCTTATGAATGCATGCTTGGGTTTAGTGAAAGACTGGTAAAAGGAAACAACAGTTTTGACTCCAGTGATGGAACCCTCTTCACTTCTGTAGCATGAGAGACCTACTGTATTACAAAGTGCTTCATTCTTTTTTGTGGAGTCTTACATAGCGCTTGAGACTCGGTTTTACATGCTGCTAAGGCTGGAAGAAAAATGGCATAAGTGGATTTTCTGTTCAGAGGATATGATGGACCCTACAGTATGAACTGCCTCAGCTATGGACATAGAGGAGTGGAGGAAAAAAGGAGGAAAGTTTCCGTATTACTCCTTTCCCCTAGGAAAAAGAAGTGAAAATGCTTTATGCAGCTCTGTCTGAGTTTATGGTGTTTCACAGGCTTACAGCTCTGTTTTTTGTAAAAGGATAAATAACTTTTTTCCTTTGACCCAAGATGGGTTCTTGGGTATTTGATTTGTTTTTCTAGGCAATAGGTGTAATGTTTGACTGAAAAGGCTTGGACTCAGGTAACTTTCTCCAGTTGGAACTGAACTTTCTCATCAGAGAATGGACCTCAAGAAGAAATGTACCCAAACGTGATTGGTTCAGTGTAGATTTAGAAAAATTCAGAGTCTGAAAAAAAGGGGAAAAAAACCCTCTCAAACAGGAAAAATAATTCCACTAAGAAAAGTAATGTACTTCCTTTCTGTTAAAACATATATTATCTGATGAACAGTCTATAGGGTAAAGCTGTCCTTACTTCCAAATCAACAGAGGACCACTGTATGAATTTCCAGGTCTTTACATAAGAAGGAAACCTTTTATAATAAATCTGTGAGTAGAGAAAGAATTTAAAGCTGCTTTGATGAAATTAAGATCAAATCATCTTAGATCATCTCTGTGATATACGGAATGTTTGCCCAGGGCCATACGTGCTATGCTG EMBV3_09876 CGGGAAAGAGTCATCCATTGAAGAGTGCAGAATTAGACAGTGGGGTGTGAGAGCCTGTTC Gene GeneID:281311|MSR1:NM_001113240:1_cdna Constitutive 0 NULL GeneID:281311 27 GENE MSR1 NULL macrophage scavenger receptor 1 EMBV3_22812 CTGGTGGAGTCTTTAGGGTTTTCTATGTAGAGGATCATGTCATCTGCAAATAGTGAGAGT Gene BVV0102_102757 - 1 EMBV3_35994 GK000009.2:320748-406551 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251968 TCONS_00007479 TCONS_00070843 TCONS_00166184 TCONS_00152751 TCONS_00174964 TCONS_00206765 TCONS_00011316 TCONS_00152649 TCONS_00223369 TCONS_00224115 TCONS_00177993 TCONS_00135549 TCONS_00189809 TCONS_00115689 TCONS_00249014 TCONS_00079524 TCONS_00231893 TCONS_00012569 TCONS_00250727 TCONS_00208545 TCONS_00223458 TCONS_00020842 TCONS_00220661 TCONS_00150794 TCONS_00254568 TCONS_00055300 TCONS_00125102 TCONS_00251753 TCONS_00110459 TCONS_00049220 TCONS_00070959 TCONS_00157711 TCONS_00116669 TCONS_00141423 TCONS_00031936 TCONS_00070965 TCONS_00234011 TCONS_00179125 TCONS_00199631 TCONS_00250724 TCONS_00124128 TCONS_00050119 TCONS_00089346 TCONS_00188853 TCONS_00141284 TCONS_00176142 TCONS_00152670 TCONS_00012572 TCONS_00240473 TCONS_00032142 TCONS_00039852 TCONS_00251587 TCONS_00022063 TCONS_00021597 TCONS_00199036 TCONS_00012578 TCONS_00156738 TCONS_00072336 TCONS_00071183 TCONS_00196914 TCONS_00220542 TCONS_00115730 TCONS_00054105 TCONS_00089141 63 XLOC_154909 XLOC_003040 XLOC_042620 XLOC_101022 XLOC_092516 XLOC_104747 XLOC_125286 XLOC_006867 XLOC_092414 XLOC_136669 XLOC_137411 XLOC_107766 XLOC_081772 XLOC_115846 XLOC_069858 XLOC_151957 XLOC_048409 XLOC_141381 XLOC_007888 XLOC_153670 XLOC_127058 XLOC_136758 XLOC_011517 XLOC_133978 XLOC_091952 XLOC_157500 XLOC_033108 XLOC_076644 XLOC_154694 XLOC_066363 XLOC_029351 XLOC_042736 XLOC_096166 XLOC_070835 XLOC_085851 XLOC_018181 XLOC_042742 XLOC_143490 XLOC_108898 XLOC_121284 XLOC_153667 XLOC_075680 XLOC_030248 XLOC_054131 XLOC_114894 XLOC_085712 XLOC_105921 XLOC_092435 XLOC_147137 XLOC_018385 XLOC_023669 XLOC_154528 XLOC_012734 XLOC_012270 XLOC_120689 XLOC_095198 XLOC_044105 XLOC_042955 XLOC_118579 XLOC_133859 XLOC_069899 XLOC_031914 XLOC_053927 Coding TCONS_00141284 XLOC_085712 Coding Coding - 24:9003823-9004449 - TSS105495 626 1 TCONS_00141284_2 175 0.990415335463259 1 0 0 0 0 0 0 8.16304195089246e-07 0 0 0 6.57267683893068e-06 4.06315129637321e-07 8.52713044315985e-06 0 0 1.74164094161532e-06 5.53171329952151e-05 2.31237932451148e-05 0.00490680836661115 0 0 0 2.57168365795849e-05 0.000159367648675866 9.70499628246162e-05 0 0 0 0 8.61660102081921e-06 2.56112693724158e-06 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 6e-90 334 74.07 0.861022364217252 XM_005256705.1 XAF1 PREDICTED: Homo sapiens XIAP associated factor 1 (XAF1), transcript 1e-91 340 72.46 0.988817891373802 TCONS_00141284_2 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 5e-73 241 64.00 0.994285714285714 0 noncoding 1 0 1 1 -0.38980194029431 0.0634389746760557 -0.0226003958036786 0.701819564419208 TCATTTTGGAAGTTTTGGCCACAGCAATCAGAGCAGAAAAAGAAATAAAAGGAATCCAAATTGGAAAAGAAGAAGTAAAACTCTCACTATTTGCAGATGACATGATCCTCTACATAGAAAACCCTAAAGACTCCACCAGAAAATTACTAGAACTAATCAATGATTATAGTAAAATTTCAGGATATAAAATCAACACACAGAAATCCCTTGCATTCCTATACACTAATAATGAGAAAACAGAAAGAGAAATTAAGGAAACAATTCCATTCACCATTGCAATGGAAAGAATAAAATACTTAGGAATATATCTACCTAAAGAAACTAAAGACCTATATATAGAAAACTATAAAACACTGGTGAAAGAAATCAAAGAGGACACTAATAGATGGAGAAATATACCATGTTCATGGATTGGAAGAATCAATATAGTGAAAATGAGTATACTACCCAAAGCAATTTATAGATTCAGTGCAATCCCTATCAAGCTACCAACAGTATTCTTCACAGAGCTAGAACAAATAATTTCACAATTTGTATGGAAATACAAAAAACCTCGAATAGCCAAAGCAATCCTGAGAAAGAAGAATGGAACTGGAGGAATCAACCTACCTGACTTCAGGCTCTAC TCONS_00139769 . 5' 144125 TCONS_00139769 . 5' 144125 EMBV3_05453 TCGTTAGCTGCCGCCCTTGGCTTCTCCCTGTCCCCAGGTCTCAGCAATTCACAGAACTCT Gene BVV0102_149047 + 0 NULL GK000025.2:33702734-33710041 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146899 TCONS_00146894 TCONS_00146896 TCONS_00146898 TCONS_00146900 TCONS_00146895 TCONS_00146897 1 XLOC_089241 Coding TCONS_00146894 XLOC_089241 Coding Coding EIF4H 25:33708569-33715415 j TSS109727 2278 1 TCONS_00146894_7 119 5 0.667932797662527 0.0152239918258689 0.000347200320403088 0.00229718152884543 0.00378360705354525 0.00787767425785966 0.00305844967028335 0.0016792992427251 3.56960526048647e-16 0.00604982898907658 0.00223214573815286 6.96020546321562e-55 0.000860179119815687 2.94034545685157e-08 0.0112714532621654 0.00306752996265965 0.0301216636633621 0.0114142382345517 0.0429178876835923 0.00846216121138269 0.00841775000475032 5.82293079778038e-08 0.0216163226771451 0.0131621983384917 0.0236977132085734 0.00325786047595846 0.00484753884368589 0.00531753003315801 1.58311763181586e-06 0.00105399340437986 0.00269464779444733 XM_005225117.1 EIF4H PREDICTED: Bos taurus eukaryotic translation initiation factor 4H (EIF4H), transcript variant X1, mRNA. 0.0 4008 100.00 0.974978050921861 NM_031992.1 EIF4H Homo sapiens eukaryotic translation initiation factor 4H (EIF4H), 0.0 1086 82.41 0.491220368744513 0 coding 0 0 0 0 0.153951750616046 0.207369618513795 0.00898628013926192 0.849028423400569 ATTTTTCAGCTTTGTAAAACAGATTTTATACCAACTACCTGAGCGGATTCTGCTATGTAGAATTTGATGAAGTGGATTCCCTTAAGGAAGCCTTGACATACGATGGTGCACTCTTGGGTGACCGGTCACTCCGTGTGGACATTGCAGAAGGCAGAAAACAAGATAAAGGCGGCTTTGGCTTCAGGAAAGGTGGACCAGATGACAGAGGTTTCAGGGATGACTTCTTAGGAGGCCGGGGAGGGAGTCGCCCAGGTGACCGGCGAACAGGCCCCCCGATGGGAAGTCGCTTCAGAGATGGCCCTCCCCTTCGAGGGCCCAATATGGACTTCAGAGAACCCACAGAAGAGGAACGAGCACAGAGACCACGGCTCCAGCTTAAACCTCGAACAGTCGCAACGCCCCTCAATCAAGTAGCCAACCCCAACTCTGCCATCTTCGGGGGAGCCAGGCCCAGAGAGGAAGTCGTTCACAAGGAGCAAGAATGAGCTTGCGGTGGGGAGGGAATGGGGTGTGGGGGGCGTTAGAGCGAGACCACAGCCTGGCTGGCCCCCCGGACCGGCAGTCCTGCAGTTACCATTCCTGCGCCTGACCTTTGTCCTCCTTTCTTACAACGGAAACACAGAGCTTGTGAGTGCATGTCAGCAGTTAACAAGTGGTTTTTAGTACATTCTTGGCTTTGCTGTATCTACCTAGTGCCCGTTTTGTGCTTTTTTTCCCCCTGCCACTCCTTTCCCCTTTTCCTTCTGTCCTTTTCCCTTCTCGCTCCTTGTCTCCTTCTAGCACACAAGTTTCTCTAGAGGGGCAGAGGCGGCCGCCGTGCGGGAGTTCTCTGGGTTGAAGTGCTGCTTCATTTCTCTCCATTGCTTTTGCCTTTTACTTCTGCCACACCGGCCTTTTCCTTTGCCTTTTCTCAGTGCTTCTCTTCTGACCTGCATGTCGAGTTCTGTATTGCTGTGGCTTCCAAGGAAGAAAGCAAGTCCCACGTTGGATAGCCCCTTGTTTTTAGTCAGCTGTGATCAACAGACAGCCTTTGGGACACCTTGCTTTCAAAACAAGGATAAAGTATCTGTTGATCTCTGCAGATTCCTTCCTATAACTATTTATAGGTAGTCCTGACTCCACTACCCGCTTCCCAAATGGGCTGTTCACGCGGAAGAGGCTCACGTTTCACACAGCAGAACCCGAGAGAATGGTGTGAACTGTCGGTGGGGAGTGCATGCAGGAGGCAGACTGAGTGCCCTGCTGTGCTCACCTGTGCTTATCACTCTTCTAGCATCGTGTCCACGCTGGTCTCCCTCGGGAACCAGCTGTGTCAGAGGCCCCTCTGTGGCTGGATGTCTAGCTTGCTCCGCCAGGCACAGCGGTGCTTTGGGGGCCGCAGGGGGCGGCGCTGTGCTGGGCTCACCCCGTGCGGACACGGCTTCCTCTTGGGCCCCCACGGTGTGTCCGGTCTCCCTCTCTGGGCTTCGCTGTCCCCCAGTGTTAGGTCACAGTGAGAGCCTGTGCTTCCCACTGCCCCTTAATTTTGGAATGAAAATGGGCCTAGGATCTGGCACTTTACTCTCTCACTTGATGAATTGAGAATTTGACTATGCAGATCTGTCAGGTAACAGGGAGGTGGCCCAAGGTCACCAGGTCTCAGCTTCAGGACGTCACTCCCACATAGAGTGTTCAGCTCTCACCCAGGGCCGGGCAGCTAGGCAGCAGCTTTTGAGCTCAGACACCTATGTGTGAACACATTTTTCAGCACCTGAGTCCCAGTTCATCCCACTGGGAGCAGTCTGGGCTCGGCTAGAGCCCCGGAAAAGAGAGACCCTCACCAGCAAGACTGGAGGGCCGGGGCAGCCGGGCCTGGGCGGCGCGCTTAGGAGACAGCTCCTCGTTAGCTGCCGCCCTCGGCTTCTCCCTGTCCCCAGGTCTCAGCAATTCACAGAACTCTGCCTCCTGTCCTTCCTTCCACCTGTCATCTTTGCTTCTGAGATAAGAACCATTTGTGTAACACCAATACTTACCTAAAGAAAGACATGCATTATGTGGTTGTAATCAAACCTGATGCTTTCAGATGACCTACTTACATCTCCAATGTGGAAAAGATTAAGAACAAAACAAATTCATCTAAACTTCTGGGCAATCCAGTTGACTTTTAAATGTAAGAATGGAATTCCAAACACTTAACACATTCAGCTATATGACAGAAAGTAAATCTATGGATATGGTATTTTGTGAATGATCTTTTAAATAAAAGAAAACCTTACGTAATATTTAATGCTTGTCTTTA EMBV3_41246 TTCCCCAACCCACTCTCCTTCCTGCCTGAGATGTAGCCTCCATGCTTTCATTGTACTCAT Gene GeneID:281426|PRND:NM_174158:5_cdna UTR3_Alt 1 NULL GeneID:281426 13 GENE PRND dpl prion protein 2 (dublet) EMBV3_29534 TGTCCTTCCAGAGACAGTCCACACTACCAAGCTGTATGGCACCACGACTTTTAAGGTGAG Gene GeneID:616280|EXOC6B:NM_001076416:19_cdna Constitutive 0 NULL GeneID:616280 11 GENE EXOC6B EXOC6 MGC128867 exocyst complex component 6B EMBV3_31193 AAAGGCTGTTTTGGATCCCTCTGCAGCCCACTGACCCTGTCACCCAGGAGACTAAATCGA Gene GeneID:540913|CCDC86:NM_001038574:173_cdna Constitutive 0 NULL GeneID:540913 29 GENE CCDC86 MGC133962 coiled-coil domain containing 86 EMBV3_10347 GCAAGACACAAAAGTTTAGCATTTACCAAACCAGTCTCTACAAACCTTTAAGCCAGAAGG Gene BVT0102_093507 - 0 NULL GK000011.2:73640273-73693683 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025452 TCONS_00025454 TCONS_00025451 TCONS_00025453 TCONS_00025450 1 XLOC_014767 Coding TCONS_00025452 XLOC_014767 Coding Coding ASXL2 11:73533217-73646862 j TSS18480 12283 1 TCONS_00025452_6 1192 0.00789709354392249 14 0.89204005490831 0.000443978455071888 0.0002516063050122 0.000190553487402463 0.000162125708420618 0.00027371884333286 4.21105912627448e-05 0.000114016617634838 0.000225385624471437 0.000493737104085245 0.000150006682840887 2.20714103944537e-13 0.000106848001704478 2.09048956555521e-05 7.41367881182067e-05 4.58074208791993e-05 0.000623694324941786 0.000765516455316803 0.000767763109353963 0.000134701763814923 1.29029692394612e-07 3.79331599354257e-05 0.000947099843384449 0.000296173536475575 0.000885979195648439 0.000198098043105636 0.000239350685038436 4.35707407759843e-28 5.73079149997025e-10 0.00012863055249225 0.000381897343780275 XM_005193938.1 ASXL2 PREDICTED: Bos taurus additional sex combs like 2 (Drosophila) (ASXL2), transcript variant X2, mRNA. 0.0 1.569e+04 100.00 0.708051778881381 NM_018263.4 ASXL2 Homo sapiens additional sex combs like 2 (Drosophila) (ASXL2), 0.0 4269 87.88 0.274851420662705 TCONS_00025452_6 sp|Q76L83|ASXL2_HUMAN ASXL2_HUMAN Putative Polycomb group protein ASXL2; 0.0 1487 84.56 0.880872483221476 3 coding 0 0 0 0 -0.177540643963393 0.423391136467792 -0.0222666612343359 0.639697998824603 GCATGCTCTGGAGGAGAGGCTGAGAACGGAAGGACGGGGGTGTGGCCAGACGCCGCGGCCGGCCGGCTCGCTCTCCCTGTGGCCCCGCGCGGGAGGCGGGGGCGCGCACACGCTCGTTCGCGCGGCCGGCTGCGTACAGTAGTGACGGCCGCGCGGGAGCGGTCACATGACCGTAGCGGCTGCCTGTACAGTAAGGACCCAATATGGCAGCGGCGGTAGCAGTGGTAACGGCAGCAGGAGGACCGGCCGCCCCATAGACCGCCCCCAGCGCACCACCCCCGTCGCTTCCTCTGCTCCGGTGCTCCTCCGGCCTGACTTCCCCTTTCTCCCACCTTTCCCGGCACCGCGGGAAGAACAGCGCAGAGCAGAGCAGGCAGGGAGGGCGGCCGGAGCCCGGACACGGGAGCCTCCCAGTCAGTTCAAGACCCGACATGAGGGAAAAGGGCCGTAGGAAGAAGGGCAGGACCTGGGCGGAGGCCGCCAAGACGGTCTTAGAAAAATATCCCAATACACCCATGAGTCATAAAGAAATTCTTCAAGTTATCCAGAGAGAAGGACTAAAAGAAATCAGAAGTGGAACTTCCCCTCTTGCATGTCTGAATGCCATGCTGCACACAAACTCCCGAGGTGAAGAAGGCATCTTCTATAAGGTTCCAGGTAGAATGGGAGTATATACTTTGAAGAAAGATGTGCCGGATGGGGTGAAAGAGCTTTCAGAAGGTTCAGAAGAAAGCAGTGATGGTCAGTCAGATTCCCAGAGTTCTGAGAACAGCAGCAGCAGCAGTGATGGTGGCAGCAACAAGGAGGGAAAAAAGAGCAGGTGGAAAAGGAAAGTATCATCTAGGCTGTCACAGCCATCTTCTCCTCATTCGGGCTGCCCATCTCCTACCATTCCAGCAGGTAAAGTCATTTCTTCATCACAGAAGCACAGCAAGAAGGCACTAAAGCAGGCACTAAAACAGCAACAACAGAAGAAACAGCAGCAGCAGCAATGCAGGCCAAGCATGTCCATCTCCTCCAACCAGCACCTCTCTCTGAAGACTGTCAAAGCATCCAGTGACCCTGTACCTGCCAAACCTGCGATATGGGAAGGAAAGCAATCTGATGGACAGTCAAGCAGCCCTCAGAACTCAAACTCTAGCTTTTCTTCTTCTTCGGTTAAAGTGGAAAATCATTTGCTGGGCCTGGGGAAGAAGTCATTCCAGAGGTCTGACAGGCTCCACACAAGGCAAATGAAGAGAACTAAATGTGCTGAGATTGATGTTGAGACGCCAGATTCCATTCTGGTTAATACAAACCTACGAGCGCTAATCAACAAACACACCTTTTCAGTCCTTCCTGGAGACTGCCAACAGCGATTGCTTTTACTACTTCCAGAGGTGGATCGACAGGTTGGTCCAGATGGTCTGATGAAGTTAAATGGCTCAGCCCTTAATAATGAGTTCTTCACTTCAGCAGCCCAAGGCTGGAAGGAAAGACTTTCAGAAGGTGAGTTTACACCGGAGATGCAGGTGAGAATTCGACAAGAGATTGAGAAGGAGAAGAAAGTAGAGCCGTGGAAAGAACAATTCTTTGAAAGCTACTATGGTCAGAGTTCTGGCCTGAGTCTTGAAGATTCAAAGAAATTGACAGCTTCACCCAATGATCCCAAAGTAAAGAAAACCCCAGCTGAGCAACCAAAATCTACGCTTCCTTCAGAGGCCTCGCCTGTCAGTGTAGTCCCAGTAATTCCCCAGTTAGAATCTAAAGAGGAAGTACTGCAGATGCCATCACCAGTCAGAAAAGAAGAGCATGAAAGCCAAGATAAGACGCAGCCACACTCCACAGAGCCCCTTCTTTCCCCAGCTACCAATACAAATGAGCTTAGCAGCATTCCTCCCATCAAGTGCCCGAAGGATGAGGCTCTTGTGGAGCAAAAGCCAGTTGCCTCTGCTGAACAGGAATCTGAGAAAAAGAATCATCTCACTACAGCTTCAAATTATAATAAAAATGAAAGCCAGGAAGCTTTAGTTACTTCCCTGAGCAAACCCAAGAGTCCTGGGGTAGAAACAACAGTAATGAAGCCCACAGTAGAAGCAAGTCCACAGGAGACAACTATGAAAGAGCCTCCATCAACTCTGGCTGATCACAGCCCAGAAAGCCTCAAGAGGAAATCTTCTCTCACCCAAGAAGAGGCCCCAACAAGCTGGGAGAAAAGGCCGCGTGTCACTGAGCATCGCCAGCACCAGCAGCCATTTCAAGTCTCCCCACAGCCCTTTCTCAGTAGAGGGGACAGGTTCCAGGTGCGGAGAGTACCACCTCTCAAGATCCCGGTCTCCAGAATCTCTCCCATGCCGTTTCCTACATCGCAGGTCTCTCCCAGGGCTCGTTTTCCAATCTCCATCACTAGTCCTAACAGAACAGGAGCCAGAACCCTTGCAGACATCAAAGCAAAAGCCCAGCTTGTCAAAGCACAGAGGGCTGCCGCCGCCGCCGCCGCCGCAGCCGCTGCTGCCGCCTCAGTTGGAGGGACCATTCCAGGACCTGGCCCAGGCGGTGGACAGGGTCCAGGGGAGGGGGGTGAAAGGAGAACTGCTAGAGGAGGGGATCCTGACTCAGACAAAGTCAGTGAGCCCAGCAAGGGCCCCGCACTGGAACTGGCAGGAACTGGAAGCAGGGGAGGTACGAGAGAGCTTTTACCCGCTGGGCCAGACACTCAGCCCCAGTCTGAGACCAGGACCGCAGGCCAGCCACAGCCTCTTAGTGGCCCTGGAGCACAACTACAGCAAACCCCCTCAGTGCCTCCCGCATCTGCCGTCGGTGGAGCATGTGCAGGTGTCCCCTCCCCAGCCCACATTCATGCACTCCCGCCAGCTTTAGGAAAATTAAGTAATGAAAAACTAAATCCCCCCAGGGTAACAGGCACGGTGGCCTCTCTCAGCCAACCCCAAGGGCCCAGTAATGGTAGGCAGGAGAAAGCACCTCCAGCTCCAGCAGATCCTGCTCTGATCATGGGTGCCTCGCCTGTTCATTTTGCAGCTGCTGGCGCAGTGGAGCCTAAAGCAGGTTCTAGTAAGAATGCCCCCAATCCTCCGGCCTCAGCAGAGATAAGTGCTAGCGCCTCAGTGGATACAACTGCCTCCCCTTTAACATCTCTGTTAACAACAGCCACTTTAGAGAAGCTCCCTGTGCCGCAGGTCAGCGTAACCACAACGCCTACTGGATCAGCTCCATCCTTGAGCACTTTGCCGGCAGCCTCTAGCCTTAAAACTCCGGGAACTTCTTCACATATGAATGGACCCATTTCAAGGCCAAGCTCTAGTATCCCTGCTAATAATCCTTTGGTAACTCAGCTGCTGCAGGGCAAAGATGTTCCCATGGAGCAAATTCTGCCTAAACCTCTTACCAAAGTTGAAATGAAAACTGTTCCACTCACTACAAAAGAGGAGAAGGGAGTAGGAGCACTCATAGGTACCAGCGTGACAGAGAACAGCACCAGAGAGGAAGTTCATGAGAGACAGTCCCATCCAGCTGCACAGCACCTGGGTAAAACTTTGCAAAGTAAGCAGCTCCCCCAGGTTCCAAGACCCCTGCAGCTCTTTTCAGACAGTCCTACCCATCAATCTCTCCTCCTCCCACCACTGCAAACCCCAAAGCTGTACGGGAGCCCCACACAGATCGGGCCAAGCTACAGAGGCATGATCAACGTCTCCACCTCATCAGACATGGACCATAACTCCTCTGTCCCGGGGATGCCCGACTGTAGTCAGGTGTCTAGCAATGTTGGTGATGTCATGTCCTTTTCAGTGACTGTCACAGCCATCCCTGCCAGCCAGGCCGTGAATGCCGGCAGCCGCGGCCAGACCATTCCTGTTCAGGCCTTCCCTGAGGAGAGCAGCGTAGAGGACACTCCTTCCAAGTGTTACTGCCGGTTGAAAGCCATGATCATGTGCAAGGGCTGCGGAGCCTTCTGCCACGACGATTGCATTGGCCCCTCCAAACTCTGTGTCTCCTGCCTTGTTGTTCGGTAATGAGATCAGAAGGAGAGCTCTCTGTAAAGGAGACAGGAATGGGGAAGGGTTGACAGATGTGGTTTTTGCCGTTCTTTTGGAATCATAGAAATAAACTAGGTTTCAGTTTCAGTTGTCTTAAGAGACAAGTGTTGCTTAATCAGGAACACAGAGTACAGATCTTACATTTTAGAAAAAGAGCACCTTGTATAGTAAGTCCAAGTCAAGCAAGACTTTGTGAATTTGTGACAAGTTTGCACTTACAAAATCATGTAAATATGTCACATCTTGTTTTAACATTTTTCCAGGTGTTTAGGTAATGATGTATTACTTTGACTTCAGATTGCTGTTCCACTTCATGTGACTGAAAAGTTTAATGCCACACCTGGTAAAAGGCAGTGATTTCCCTTCTGCCCTTTCCTAAGAGGCTAGGAAAAGGAAGGAGTGGAGGAATGGTCTGAGGAAATGACTGTTCATGTTGATTATGTCTTGACAGTCTGACTGCAGGCTTTACATATAGATTCTTAAGCCTTTGCAGAATTTAGATTGAGGGTTTACTCACTCCCTTTACCTAGGTGGAACCTGCTCCAGTTGTTATTTTTGATAAGGCATTAATTTCATAGTGTTTCTGACTCTGAAAGTTCTGCGTTGGTTCTTGGTTTCCACAGCCCAGTCCTGTTGCCAGGCATTCTGCTTGCGGTCTGTGAGGCCCTGCCATTCCCTACTCCCACTTCTTGCCCTGAAGAGAGAGTTGCCTCACTAGACCCCTCAGGTCACCATCCCCTGTGCAGGGCAGTGATTCCAGCAATAATCTCTGAGGATTCAGTCATTCATGGGAGCTTACAAACAAGTTTGAAATACTAGTAGAAAATTAACAGAGAAGTGTCAGTGATAGGGTGTTTTGTTGGGTAAGCGGAGTTAAGGTGCAGAAATTTTTGAACTGAATTTAAGGAACTTTGGAAGACAGTTTTAACACTAGAAACAAAGTAGCCCCTCTCTCTCCCCCTATTCTCTCCAGCCTGTTACCTAATGTTCTACAGTCAGCTGTATCTACAGGTAGAAAAACTCATTAAACCACATTTGCCCCATGCTGTTTTATCTGTTTTGACCTCCAGGCATTTGAGGAGCATGGAAATCATCTTAATTATATTACTTTGAACATATATGTGTGGCATACACATTGTAAAAGTCAGACACTTTTTCCTATTCTCCTATTTTGGAAAACATGTCCCCTGTTTTGGATTACTGCTGTCTACACATTAGAAGTTTCTAATATAAAGGGTCTTTAGTGAATGACTAAGGGAACGTCTAGAAAGGAAGAGAAATCAGCTCCAAATTTTTGTTTGTTCTTTTTTTTTGTTTCCTTTTTGTTGAATCCTGTCTCTCGTAAATGAAGAATTTTTGAATACATGTGTTTAAGTCATGGTTAAAGAACATGAAAATAAATATACAATTTATCAGAATTTGGTATTAAAAAGTTGGGGATTGTCAGTGTGCATCGTTTGCATATTGATTTCAAATCTCCTGATTTCATGTGTGTAAAGGACATGTATCTGTGCCACCTAGCACAGTCATCGTGCTTAATATTCAGGATGTGATATATACAAAATGCAGAACAGCTTAAACTCCTTAATGAAGTCACATTCCAAATAGGGGAAAGTAGACAGTAATAATCTTAGCTTTGCCCCCATTGTACTACCCACCCCTCCCTATCTCACCTCTCAAATTACACATACACTCAGTACTTTAAAACCCCACAAGAAACTATTTACTTCTGTTTTTTGTTTGTTTGTTTCTGAGTTTTTTATGGTTCAAAGCAAATAGAAGATTAGTATCTGTGTTCTATTTCAGCCAAGACAATTTAATGTTCTTCTAACTTCCCTTTTTATTCCAGCACACACATAGCTAACAGATAAGAAATCTGCAAGGATCCAGGGATAAGGAGCAAGTTCTCCAGCCAGTAACCAGTAGAAATCAAAAACCATGGTTCTGTTCTCAAATTGTCAGTGCCCTGGGTAATCCCAAGGGGTGTTTAAAAGACCTGATGATAGTTAAAACTCTCTATTCCCAGCTTTCTCACTACCCACTTTAGTGGCAGGACTGAGGGATAGCCTGCCTGCCTGCAGTGGTTGACTGTTTGAGAACTGACCCTACGGTGAACTTGTAACAATCAATTTGGATTTTTTTTCTTCACGCCTTTCCTACCATAGTCTCTCCTCCATGGTTCTCTTCATCAAAGGATGGACAGACTAACCAGGAAAGGAGGAAAGGCATCAGGGATTTTCAGGTCCATTTAGAGAGCAAACCATATCGTGCCTATTCATCTTGACCCAGGCCCTTGAAGAGAGGCCCTAAGCAGTACTGTTCACCAGATTCTCTTTACAAATAATCCCCAGCTAATAAAATAGTAATCATCAGCTAAGTGTACTGCCTCAATCTTGGCTAAATGAGAAAATAGATTCTGTTAGATTGGTACAAAATTGAATGCAGTCTGTTTATCAGTTTGTTTCAAAACAGTGGTGTCAGGTAGAAGGTCATCTTACAATGCTGACTGAGCTGAAAGAACAAAAAGTAGAATCTGGCTGTTTCAAAAACGAAGCAGTAGGAACAAGAAAATCTTTAAATTACTAGAATATCATATCCCAGTACCTTTCAAGCAGTTTTTAATCTTAGGTTTTCAGTTACTTTACCTTTCAGTTCAGTCTGGAATGTGTCTAATAAGCTGCTCAGCTTATTTTTATGGTATTAAGTTGCACTATTTCCAGAGACTAGTCAGGCATGCTGCCTGATGCTGATGCCTCCAGGGTATCTTCTCTGCCTTCAGATAACCTTCCACTTTGGTGGGTCACCTTGGGGAGATGGCATTAATGATGTATCTATCATCTCATTCTCACTGACGAATATTCTTAAGTTGTCTAGTAGAGAAGGCTCCCTGAATCTTAAAGATTTTTTTATTAAAATTCTTCCTCCTATTAAACAAAAAGCCAAATAACCTGAAGTTGTTTGCCCTACATAATAACCCATGTTGAAGATACTGAAGCTGTCTGTAGTACCCCATGTAACATTTTTTAAATATTGGACCTGGCAGACAGGACATTTTTCTTGCGGCGGGGAAGCATACTTATATGGGCTGGGAAGGCACACAGTGTAGATATCACAAATTTAAACAGAAGAAGACCTTACTGCCTTCCGGGTGAAGGCATAAACTCATTCATAATCGGGTAGTTTACCATCCTGATTTCTTACTGCCTTTCTTCACCTAAGAGTCCTGAAGGCCTCTTGGGTGAAATTATTTGTTAAAATGAGGGGGTCTTCTCTGGTCATGACATCACTGTTTAGAGCTCTGTCAGTAAGCAGTACTAGGGTTTTCTCTGTGACCTAGGGATTTCAATTCACAGCAAGGAGAGAAGTCTCCCTATTTCATTACAACAATATGCTAAGTAAAAAAAAAAAAAACTTGGCCAAGGGTAGCTTTCAGCTCAATTCGTAGAATAGTCCAAAGAGACTCTGAGAAATATGGTAATAAGCAGGGATCTTTCCTACCGTGTTTCAATACCTACGTAACCTATTGAAATTTCGAGAACAATAGGTAAAACAGTTCCTAAAGTTGAAGAGCTTCATAGATTCTTGGTTACTTTATTTTTTTTAATGCTTTACATTTGATACAACTATTAAAGATCAATTTAAAAAAATAGCTTTCCAGTAATATATTTTAAGTAATATATATTTTAATATCTATGTAAAAAGTGACAGTGGAAGACTTTGAATTTCTCATATAAGGTATGTTTAATGTAGGACCTCACTGTTAAGGCACAAATTATTTCGAAGAAAGTTACTCAAAGATACTCAGATTATTTCCCCCAAAAAAAAATGCAATAAGGGGAAGTTTTGGAGTTTATTTTTTATTTTAAAAGAAAATTGACTTATTTACCACAAGCTATTTTTTTTCCTTCTGGCTTAAAGGTTTGTAGAGACTGGTTTGGTAAATGCTAAACTTTTGTGTCTTGCCTTTTTAAAGGAATTGTTAACATTGGAATTGAGGGTATGTACAGAGAAGTTGGTGTCAACACCATTTAAAAACATATTTTTTCACAAGTATAGAAAAATCATTTTACATGAGAATTTTAAGTATTTGCAATAAATATATGTATATAGATTGTATGTATTCATATATTCTTATTTTTCATTTTATTATTAAGTAAAAGATAATTAAAGTGAAAATGAACACCCGTGGAGTTTTTGATGCATCTTGAGGTCTGACATCCATGTGAACGTGGTGTGGGTGAGGGCCCTCAGGTGTTGCCTTATACTACTATTGGAAGATTACCAACAGACTGCACAGAAGAGAGTCAAGTGAGAAATTTGTGATAAATCAGGGTAGTGTGTTTCTTTCAGAACTCTAGTGAATTACTAAACGTTAAGTCCTCCCAGTCTGTCTGTCTCTGTGCTCTCACCCTTGAATTTGTTTTCTCTCCTAACCACCTACTGCTGGGAAAGTCGAAACACAGTGCATTCTTTTTTATGTAGTATGCTTCTAAGACAAAGAATGGTAAGAAAAGACCTGTAAAGGGGGAAGTAGGTTTTTGTTTTTCCACAGTGGTAATAATTCATTAACATTCTCTGCTACCACCTTCAAGCCATAGGGTTTACATGAAGAAATAATCTTGTGAAGATAATAGAAATCATTCTGTTTTCCTTCTTTGAGAAGTGAATTTCATAGCCAGTTTCATGTCTTTTCCAATTGATCTGGAGAAAGAAGGGCTAAGAAAACTTGAATGTTGCTCTTCCTAATGCCAAGAAATATGTTTATGGAAATGAGGACTGAGCCAAATATTAGAGGGGAGGTTAACCACATACCTAGAGATAACCTGGAGTCCTGCTCTCCAGAAGTCATTTTGAGATTGTAAATACTAAGTTCTAGGATATGACTGAGGAGCAGGAGGATACCTAGTCAGTCGTTGGAAATAAAGATATATAGCCCATTCTTTAAAAATGAATAATATATAGCTTTATTGGTGACCTGAAAGGAAGTAAGGTCAGAGTTTGAAGAATATATCTTAATGACCTATGAAACACTTAATTGTAGTTTACTAGTTCTCCCCATAAATGCTGTGGTGAAAAATTGCAATTTTTGGAAATTAAGATACATAAAATACTTAAAGGAGTATGCCGCTTTGGGCATACTTACCTTCCCGACCAGGAATAAAGCGCATGCTCCCTGCATTCAGGGTGCAGAGTCTTAACCACTGGATCACCAGGGAAGTCCTGAGAATGTTCTCCTAATAGCCTTATTATTTTAAAAAAAATTGGAAACTCATACATAGGGTTGCCCAAACATGTTGAAATAGACGCCTAAGAGAACAGCACTAAATCTTATGCTGAAAAAACACTATTTCTAAAGGAAAAAATTCTCAGGGAACATGTGCTGCCTCATAATTCCCATATTTGGTAGATAAGAATGAAGGTGAAATATTTCCAAGTGTGTGAACCAATTCATGATAACCATTTATAAAAATTGCCATGCCCCTCCCCCCCCCCCCCCAATTTCTAATGCATAGTTAGTGTTATTCCTACCTACCTCACGGGAAGTAAAATTCATATTCAGGTAGTGACATAGGACCTCAAGGACTGCAGTTGACTGAGAAAGCAATACACCAGAACACAGCTTCAAATTGGATCCCCAGCTTTCCTTTATTTACATCACAGGACTGCAGTTGACTGAGAAAGCAGTACACCAGAACACAGCTTCAAATTGGATCCCCAGCTTTCCTTTATTTACATCACAGAGTCTTAGAAACCTGTGTTCATTGCTTTTTACCACTAGTTAACCAAGAGTGGTCTCCACAAGTCAAATTTCACAGTTTTCTAGTTGTTTGTGTACATAAATCATGATGTTCGAGTATCTTCTGAACACCTGTGTGCGAAGCACTGTGCTAAAGTTCTAGTTAAGCAAAGGTAAAAGCAGTCATGTAAAAGGCTTTCCTAAAGGAGTAACCATATAGCATGTGTCTAGTTCAGAGCTCAAGGAGTAATATATGAAATTTAATAAGAGTAAATGAACTATGAAATAGAGGTCTTTGAGGCACTGAGCAAAGCACAGTGGCAAAACAGGAAGAAAGAAAAGGGGCATTGCCCCTACATGAGAATTCAGTGTGTAAGTGAGCCAGGTTGATAAAATTTACCTCCTTTGACAACTATCATTTGAAGATCTAGAGATTAATAGAAATTTCAAGAAATCTCTTGGTAATACCAAGATTGAGAAAGTCATTCTGTTCAGTATGTCAGTAAAGATACTTCTTATTTTCAACTTACTCAACTAACAGTTTGGTAAATCAGCTTTCCTGTCAAAATAAGCTAAAGGAAATAAAAGAGTTTGATTTCCATCTTGTAGACTGGTGAGAAGGAAGTGTATTCATTTAAAACTTAAGATATTTTCATCCCCTTTCCCCCTCCATTATGGATAAAATTAATGTTCTTTTCATTCTAGTATTGTAGAATTGACTTTTTCCACCCCCTTTCTACACAGAACTTGAATTAAAAGAGGCTTCAGCAGGACACTTGCCCTTATAAAGTGGCCTAAATCCTAATTCTTTATGACTTTCCAGTAGAAAGATTTTAAAAGGATAGATTTATTTTCTCAGTGCTTATCTTTAGACTTTGTTTACCTGGATTATGGGTTTGAAGCTTGAATTTCTGTATTCCAAAATATCCATGTTCACCTTTCAGTCAAAAAGGTATTAGGTGTATCCACCATGTAATACAGTCTCAAGTCTCTCCAGGAAGTAAGAGGTTAGATACCCTGTATTTTCCTTATACTTCATGACCTTAAACAGAAGATTGGGTTCCTTTTATAAGGACTGTATAAGCTAAGGAATCTCTGTACCACTGTGTATCTCTCAGTCTTAACCTAAAAAGGGCATGCCTACCAAGATTTCCTTGTCACAGACTAAACTTGGAAGAGAGAGCTGATGAGCTGTTGAGGTGGGCTGTGGCTAGATAACCGGCACTCATGAAGAATAACTGCAAATTGAGCTTTCCTGGTTCTTCAAGCTCAAAAGAAACTGAAGGGAAAATCCTGATTTTCATCTTGGCTGCAAAGCTTAGTGAGTGCCTAGGGAAGAAGAAAGATAAACCCAAGATTGGACTTAATAAAACTTAAAATTATTTTTATCCTTTTACTGAAACTTTTTTAAGGTTTTGGATTCCTAATAATGTACTGAATTGCCATGAGTGGAACATGGAATTTGATGTGAGGCATTTTGTGGGCTAAGTGATGGTTTTCTATTGAACCATATTATCTAGTGACAGCTTTTGCCACTGCTCAGCATTTAAGGTTGTGCACCTGTGGCTAAGTGATGCAGACATTGGTTCAGACAAATTCTATATTAAACCAATTAGAGCACTTGGATCCTCTTTGTAAATATTTAATATTCAGATTAACCCAATAAGAAAGCAATGCACTAAATGCTATTAAAATACCTGAAGATACTTTAGAACTATTACTATACACACAGTCTATGTCCTTCCTATGGAAAGTGTGGTATGTAAAATCTTATATTTCTTGGGTCAATTCTTTTAAAAAACCAGTGTCTAATGTTTTCAGAGCTTAGAAACACTGGAGTTGGACTTGAACTCCATGTCAGCCATTGTTTTCATTTTAAGTTTTCAGACAGTGGTTTGAAAGGAACCCAGCTGAACCCATATGTAACCATTCTGAACAAGCTTTAAATTAATGAAACTTAAGAGTCTCAAAATTGGTTTCCTGTTCGTTGTATACAGAGACAGAATCTGTGCTGAAAAGGACCTGACAGCTTTACTCTGATAATAAACTTATTGAAGAGCAAGTTTGTTATTAGAAAGTTTGTTATGAAATTTTTAGAACCCATGAAAGATCTAGAGTACATGATAAATGAAACTCTAGAAATTAAAAACTTAACCATAAGTGCTATGACCTATTTTTTTTAAACCCATATTAATTCTGTGACTCATTGCATCATACCCTAAGACTTTCACCAGCACCAAGAGAAATCAGAATAGAAGAAATGACCTTAGCTGGTCTTACTTTAAAATTTTTGTACGCATAGGCCTTAGCACCTTGACAGATAAAGCCCTGCCTTTTAGTTCCTCCTCACTCTTATCTTTATTCTTCCTACTTTTAGACTGTTCCTCTTATTGGTCGTATAAAACTACCTTCAGGATTGAATGTATAGTATTGTTTCTGCACATGGGCAAACTGTATTTTATCTTAATGACTCATTTTATGTTGAATAAAGGCATACAGTTTTACTCTAGTG EMBV3_13628 GTGGAAATCGAGGACCAGGTGGAGGGCTTGCAGTTCGTGGCCGAGAAGTATGGCTTCATT Gene GeneID:521100|DPP9:XM_002688929:115_cdna Constitutive 0 NULL GeneID:521100 7 GENE DPP9 NULL dipeptidyl-peptidase 9 EMBV3_10483 CCAGAGCCCACGCCAACGGGTGGGCCGAAGTGTGTCTATTTTCCTGATCTGTTTTCTAAT Gene GeneID:617772|TPRA1:NM_001102314:50_cdna Constitutive 0 NULL GeneID:617772 22 GENE TPRA1 GPR175 MGC159755 transmembrane protein, adipocyte asscociated 1 EMBV3_10638 CATGCAAACATATACTCCCCCCAGGAATGACCTGAGATCACTCTGTGCTAGTGAACAGGA Gene BVV0102_263342 - 1 EMBV3_26228 GK000011.2:94064901-94072876 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25835 GTAAATATTTGGCCTTGGGGCCATCATTCAAATATCCTTTCTCCTTCATGCATGTAAGCC Gene BVT0102_077380 + 0 NULL GK000001.2:138305753-138348892 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22685 AGTAACTATATGTGTGAGGAGCTTATGGCTGAACTGGCAGAACCTTCTTCTCTTAGGAAG Gene GeneID:506597|GPN3:NM_001075272:72_cdna Constitutive 0 NULL GeneID:506597 17 GENE GPN3 ATPBD1C MGC142332 GPN-loop GTPase 3 EMBV3_34472 CTGGTGAACACTCAACCTTGTACACATTTGGGATCATGTCCTTTCCCTTCTCTGTCCCCG Gene GeneID:521025|ATXN1L:XM_002694841:753_cdna Constitutive 0 NULL GeneID:521025 18 GENE ATXN1L NULL ataxin 1-like EMBV3_17888 AGTCTCCTTTCTCATCTTCAGCCAGGGAAGGACTGATTGAGGGCTTGAGTCCTGGTCCAA Gene BVT0102_162485 + 0 NULL GK000013.2:64612428-64624465 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00019 AGGCAGGCGAATCCCTGGCGTTTAGAAGCAACTATAGCCGGCCTGATTGATCATGGCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10228 GGCCTAACAGTAGAAAAAACTGCATGGACAAGAACTCCACGCTGGTGAAGATAGACAGCC Gene GeneID:616085|CLEC12B:NM_001076408:64_cdna Constitutive 0 NULL GeneID:616085 5 GENE CLEC12B MGC133906 C-type lectin domain family 12, member B EMBV3_24237 CTGAACATTAAGACTGGGAGATGCTCAGAAAGCTACCAAGACAGAGTGGCCAAGAGGGAG Gene GeneID:783380|LOC783380:XM_002690241:54_cdna Constitutive 0 NULL GeneID:783380 9 GENE LOC783380 NULL similar to trace amine receptor 8 EMBV3_32495 CCACCGTCTCCGGAATCTCGCTCTGCCCTGGATTTCAGTTTGTGGAAATGAGCAGTCGTA Variant GeneID:529245|ORC4L:NM_001046301:106_cdna 86^145 5 EMBV3_30273 GeneID:529245 2 GENE ORC4L MGC133948 origin recognition complex, subunit 4-like (yeast) EMBV3_28264 CGAACAGGCTGTGAAGAAATGCTATGACATTGATGTAGCCAAGATCAACACCTTGATCAG Gene GeneID:783876|LOC783876:XM_002696584:19_cdna Constitutive 0 NULL GeneID:783876 21 GENE LOC783876 NULL similar to hCG1643032 EMBV3_12327 GGTGCAAATTAGTAAAACCTCCAAAAGAAGTTCATGTTCTTTGGTGGAACGAGAGTGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17523 CCTCAGGCCTCGTAACAGATTCTAATGAGGGGGCATTCCTACTCACCTTTCCCCCAATAT Gene BVV0102_374627 + 0 NULL GK000007.2:12712111-12717685 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211811 TCONS_00211809 TCONS_00211810 1 XLOC_130007 Coding TCONS_00211810 XLOC_130007 Coding Coding - 7:12714524-12717153 - TSS159087 1910 2 TCONS_00211810_2 132 0.050261780104712 5 0.275114155251142 0.00293484578891544 0.0021547839605752 0.000818800841333551 0.000473866323683504 0.000843972910089684 0.00107965739417178 0.000302250979706613 4.32314219823957e-05 0.000495712302219348 7.87442980125154e-05 0.00145951280321167 0.000251071110266427 0.000156233073158246 8.61983294798605e-05 0.000159184538459162 0.00680848067464881 2.34628048502298e-17 0.00555514653567034 0.000893548605871541 0.00117471465686857 2.06603763095854e-05 0.00365769941206552 0.00115138763594583 0.00169389350365779 0.000623924904361276 0.000223145502448512 0.000981635985642218 0.000658782929762248 0.000848918472779039 0.000274779094958266 XM_001250641.4 SAMD1 PREDICTED: Bos taurus sterile alpha motif domain containing 1 (SAMD1), partial mRNA. 0.0 2039 99.91 0.592670157068063 NM_138352.1 SAMD1 Homo sapiens sterile alpha motif domain containing 1 (SAMD1), mRNA. 0.0 1193 89.60 0.467539267015707 TCONS_00211810_2 sp|Q6SPF0|SAMD1_HUMAN SAMD1_HUMAN Atherin; 2e-85 263 95.45 0.992424242424242 2 coding 0 0 0 0 -0.109219633912815 0.48884863625317 -0.00757538367399221 0.903765358757136 GCCGGCGGCCCGGCTCGGCCCGTGAGCCTGCGGGAAGTCGTGCGCTACCTCGGGGGTAGCGGCGGCGCCGGCGGCCGCCTGACCCGCGGCCGCGTGCAGGGTTTGCTAGAAGAGGAGGCGGCGGCTCGGGGCCGCCTGGAGCGCACTCGTCTCGGAGCGCTCGCGCTGCCCCGCGGGGACAGGCCCGGGCGGGTGCCCCCGGCCGCCAGCGCCCGCGCGTCGCGGAGCAAGAGGGGTGGAGAAGAGCGAGTGCTTGAGAAGGAAGAGGAGGATGAAGATGACGAAGATGAAGATGATGAAGATGAAGTGTCTGAGGGCTCCGAGGTGCCCGAGGGAGACCGTCCTGCAGGTCCCCAACACCACCAGCTTAATGGCGAGCGCGGCCCTCAGAGTGCCAAGGAGAGGGTCAAGGAGTGGACGCCCTGTGGACCCCACCAGGGCCAGGATGAAGGACGCGGGCCAGCGCCAGGCAGTGGCACCCGTCAAGTGTTCTCCATGGCCGCCATGAATAAGGAAGGGGGATCAGCCTCTGCTGCCACTGGGCCAGACTCCCCATCCCCCGTGCCTTTGCCCCCAGGAAAACCAGCCCTGCCTGGGGCTGATGGGACCCCCTTTGGCTGTCCTTCCGGGCGCAAGGAGAAGCCGGCTGATCCTGTGGAGTGGACGGTGACAGATGTGGTAGAGTACTTCACCGAGGCTGGCTTCCCAGAGCAGGCCACAGCTTTCCAAGAACAGGAAATCGATGGCAAGTCTTTGCTGCTCATGCAACGCACAGACGTGCTGACAGGCCTGTCCATCCGCCTCGGCCCAGCCCTGAAAATCTACGAGCACCACATCAAGGTGCTGCAGCAAGGCCACTTTGAGGAGGACGATCCCGACGGCTTTCTAGGCTGAGCGCCCAGCCTCACACCCCTGCCCCGACCCACTCCAGTCTCCATCTCACCCAAGACCCCCAAGAGTCTGGGAGCTGGACCAGGAACGCCCTCAGGCCTCGTAACAGATTCTAATGAGGGGGCATTCCTACTCACCTTTCCCCCAATATACACGCCTCTGGCCCCCCGGGCACATCCTGTACTCCCTGACAAAGGAGTATGGGGTGGAACAGGGCTTATTCCTTTCACCCCAGGAGGCCAACCCCTCCCTGCCCCGGCCAACCCAGTCTAGGACATTTTGGGGGAAGAAAATGGGGGCTTCCCATCTTCCCTAGATCCTCTTCAGTTCAGCCAGATATTTCCTATATCAGTGTTTTATTCTGCCTGTTCATTTTGGTGGGTGGCCTTTCCTCTCTCCCCCACCACCCAGGCCCCTCCCCAGTCTGGCCCTGGCCTCCAGCCCCTGGTAGCAGCTGGGAAAGGGGTCCCTGGATCTTCCCTATCCGTCCTCCCCTTTTCTTTCTGTTCATTGTCGCTCCAGCTGGCCGTATTGCTTTTTAATATTGCACCGAAGGTTTTTTAAATAAAATTTTAAAAAAAGAGAGAAGAAGAAAATGGCATGGAGTCCATTTCATGAAAGTAGTCTGGGGAGGAGAAGAGCCACCCCGGCCCCCTAGGAGTCTTTGGTTTAGGACAAAGGTGTATGAGGAGGGAGACTAGGTAGTGAGTGGTGCTGCCTCAGAGCTGGCTGTAATTTTGACAGTAACTGTTCCAGGAGAACAGGATTATTTGTTTCTTCTGCCATCTTTCCTTTCCCAGAATAGTCCCTGGGCACACAGTAGGTGCTCAAATATTTGTTAAGTGACTAGCAGTTAACTCTAGGTTTTATGAGCATTCTCTTGGTTCTCACCAGAGCCCCATGAGACAAAGCTTATTAAAAAAAAAAAAAAAAAAACCACTTTATAGACCTGGCAACTGGCTCATCACTGCAAAGATGCTGGCTCAGTGTCACACAGGGTGGGGTCGGACACCTGTCAT TCONS_00211812 TCONS_00211813 TCONS_00211814 TCONS_00211815 TCONS_00211816 TCONS_00211817 s 5' 533 TCONS_00211807 TCONS_00211808 s 3' 2415 EMBV3_18727 GGTGGTGAGAGTTTGGTTTTGTAACAGGAGACAGAAAGAGAAAAGGATGACCCCTCCCGG Gene GeneID:783320|POU3F2:NM_001080348:17_cdna Constitutive 0 NULL GeneID:783320 9 GENE POU3F2 MGC137739 POU class 3 homeobox 2 EMBV3_07221 GCCTGTTTTGGGCTTTGATGCCTATCATTGGGTGGGCTAGTTATGCCCCAGATCCTACTG Gene GeneID:539343|RRH:XM_002688080:118_cdna Constitutive 0 NULL GeneID:539343 6 GENE RRH NULL retinal pigment epithelium-derived rhodopsin homolog EMBV3_07938 GGAAGATACTAATGGAGTAGTTAATGTACTCAGGGATTTCTTCTAAGCATACTTCATAGG Gene GeneID:504350|ENPEP:NM_001038027:20_cdna Constitutive 0 NULL GeneID:504350 6 GENE ENPEP MGC127440 glutamyl aminopeptidase (aminopeptidase A) EMBV3_27111 TAGATCTCGAATCCGTAGACATGCAGGCAAAGCCCAGAGATGGTAGGCGGTTCCCAAAGA Gene BVT0102_180916 + 0 NULL GK000002.2:130069613-130079645 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104004 1 XLOC_062267 Coding TCONS_00104004 XLOC_062267 Coding Coding ZNF436 2:130077452-130091057 j TSS77110 9340 1 TCONS_00104004_6 470 0.161670235546039 4 0.313731255513084 6.09539086162093e-05 8.31046805799372e-05 6.95617281339239e-06 0.00115198302472798 0.000236134534415164 3.19417276200212e-18 5.1661726538022e-06 5.00820555021806e-18 0.000115488742385811 1.56554424185732e-19 4.41692353757558e-29 9.87687612423685e-06 1.42440646077817e-14 2.99418934598253e-36 2.21526042632628e-67 7.27051922901151e-05 1.73715824453623e-40 1.04951589762819e-20 9.50978091310654e-05 0.00130987792504411 0.000484724870619199 0.000136300767210518 0.000134371608528032 0.000122554326589243 0.000542999606246781 6.74261146917929e-30 0.00047472043602714 1.70303081654895e-05 3.0804737212457e-05 1.4235184385951e-23 XM_001789087.3 ZNF436 PREDICTED: Bos taurus zinc finger protein 436 (ZNF436), transcript 0.0 7117 100.00 0.42237687366167 NM_030634.2 ZNF436 Homo sapiens zinc finger protein 436 (ZNF436), transcript variant 0.0 4351 84.16 0.421948608137045 TCONS_00104004_6 sp|Q9C0F3|ZN436_HUMAN ZN436_HUMAN Zinc finger protein 436; 0.0 946 96.81 0.997872340425532 8 coding 0 0 0 0 -0.0285347617839883 0.803283691399469 0.0174972643783766 0.714523791510536 AGAGTGGGGAGTGGGAGAGTCTACCTCCTGGCTGGGTAGGGTCCTGAGTTCTTTTTAAACACTTGATTAATTAACCATAAATAACTGGGCACTGGGAACAGAACACTCACTAATAAAAGCGTAGCCTAGAGTCACGTTTGATGAAAAAAATTCAAGTCACTTGGTGGATGGACATATCTGCAAAACAAAAGAAAAGCCCCTTTCCCAGCCCAGGCAGAGAAGTCTCCTGTACAGTTAGAGACAACAGGCTTCTGGGCACGTGGCCAAGGTTCTGGGGATATTTATAACTTGAAGAGGGTGGGAGTCCCTAATAAGCTGCTATATTCTTTTTCCATCACTTCCCTCTCCAAGGCTACAGCGAGCTCGGAGCTCTCCTTCGCGCAGAATGCCTGCTCTCCCTAGTGCTCCGCTTCCATTGTCTCATATTCTCATCCTGGCTGGGGAAAGGGAAGGCTGAAAGTCCTTCCGTTCGGAAGAGCTCCAGTTGAATGCAGCTTAGCTGCTGGTGGTATTTCTTGGCTAGCTGCTGTGGTCTCGGAGATCTGCCTAGGAGCCTGTGGTTTCTCTGAGCTGCCTCAGAGTCTGATGTTTCGGGAATTCTGTGAGTCTTTGGGAACCGCCTACCATCTCTGGGCTTTGCCTGCATGTCTACGGATTCGAGATCTACCTGCAGATCTAAGATATCCAGGATCTGCCGCTGATTCCTAGAATCTTTCCAAACGTCTGCAGTCTCAAGAGAACTCTGCCTGAGGATTTGAAATCTGTTTTGAGGCCTCTTGGATCTTTTGAAGCCAGAGACCTAACGCATCTTTTGCTGGCCAGGAGGTGAGTCTGTTGGTTCCCAATTCGGGTTTTCGGCTTCCTGCCTTCAGTCGGTCAGGGGCTGTTAACATCCTGAGAGCCCGCTGGGCTTAAGCCATTAGAGGCCCACGATCCCATCGACGCGGGAGGCTGCCAGGAACTCTTTTAGCAGGCAAGCCCTCAGGGATAATAAGGACAGACTTTCCGAACCCCGGGGCCCGGCTCGCTCCACCTTACGCGCCCTATAACCCACCCTCTCTTCTGATTTCGCTCCGGCTTTTGCCTCCCCTCCGCTAGGCGCAACTCAGCCGGCCCCTCAAGGGGAGCCCGTTTTAGAAGGACGCGGTCGGACACCCCTACAGGGTTAACAGCGATAGAGCCGAGTCCCAGCCGGGCCCTGCCGCGGACCTCTCTCTCCTACGGAAGGGCTGCGCGGTGTCTCCTGGAAGTTGTAGTCTGCGCAGCAGTCGCTGTCTGCTAGCTGCTTTTCCTGCTCTCTCTCCTGGGAGGCGAATCCTTGAGCCCGAGATGGCAGCCACCCTGCTCATGGCTGGGTCCCAGGCACCTGTGACATTTGAAGATATGGCCATGTACCTCACCCGTGAAGAATGGAGACCTCTGGACCCTACACAAAGGGACATTTACAGGGATGTTATGCAGGAGAATTATGGAAATGTTGTCTCATTAGATTTTGAAATCAGGAGTGAAAACGAGGTGAATCCAAAGCAAGAGATTAGTGAAGATGTAGAATTTGAGACTGCATCTGAAAGACCTGTTGGAAATACTGAGGAAAATCCTGAAAGTGAAGAGGCCTTTGACAACAGGGATAGATCAGAAAGACAATGGGGAGATTTAACCGCAGAAGAGTGGGTAAGCTATCCTCTCCAACAAGTCACAGATCTGCTTGTCCACAAAGAAGTCCACACAAGCATCCGATATCATATATGTTCTCATTGTGGAAAGGCCTTTAGTCAGATCTCAGACCTTAATCGGCATCAGAAAACCCACACGGGTGACAGACCCTATAAGTGTTATGAATGTGGGAAGGGCTTCAGTCGAAGTTCCCACCTTATTCAACATCAAAGAACACACACTGGGGAGAGGCCCTATGACTGTAATGAATGTGGGAAAAGTTTTGGAAGAAGCTCTCACCTCATTCAGCATCAGACAATCCACACTGGAGAAAAGCCTCACAAATGTAACGAGTGTGGGAAGAGTTTTTGCCGGCTGTCTCACCTCATCCAGCACCAAAGGACCCACAGTGGGGAAAAACCCTACGAGTGTGAGGAGTGTGGGAAAAGCTTCAGCCGGAGCTCTCATCTAGCTCAGCACCAGAGGACCCACACAGGTGAGAAGCCTTATGAATGTAACGAATGCGGGCGAGGCTTCAGTGAGAGATCTGATCTCATCAAACACTATCGTGTCCACACGGGGGAGAGACCCTACAAATGTGATGAGTGTGGGAAGAATTTCAGTCAGAACTCTGACCTCGTGCGCCATCGCAGAGCCCACACGGGGGAAAAGCCGTACCACTGTAATGAATGTGGGGAGAATTTCAGCCGCATCTCACACTTGGTTCAGCACCAGAGAACCCACACTGGGGAAAAGCCATATGAATGTAATGCCTGTGGGAAAAGCTTCAGCCGGAGCTCTCACCTAATCACACACCAGAAAATTCACACTGGAGAGAAGCCCTATGAGTGCAACGAGTGTTGGCGAAGCTTTGGTGAAAGGTCGGACCTGATTAAACATCAGAGAACCCACACAGGAGAGAAACCCTATGAGTGTGTGCAGTGTGGAAAAGGATTCACCCAGAGCTCCAACCTCATCACACATCAAAGAGTTCATACAGGAGAAAAGCCTTATGAATGCACAGAATGTGAGAAGAGTTTCAGCCGGAGCTCAGCTCTTATTAAACATAAGAGAGTGCACACTGACTAAGTCCTGTAATTACGACTGGGAAATGATTCATTTGAAGGTACAATTGTATTTGATATCAAAGAGCTCTCTCAAGACTGAAGCTTCTCTTACTGTACTGAATTTCTTTGCTGTGGGTCACCATTTAAAACATCACAGAAGACAAGCCACTTGAAATTCTGACCCATGGCTTTGGGAATATTATTCCCTTTTCCAAAATAGTGATTTGTATTCATCCAATACTAACGAATTATTTCATCAAAATCAGCCTCACAAATAACTGGAAATCTGAAGACCAGGTGATAAATGCTGGTAAATGCTCAGGCCTGGAAATGGAGTAAATCTTTCAAAGTAATTTCTCCCATCCTTGACCCAAAGAGCTATACTAGGAGAAATGTTGAACTGTGATAGGGTGGTCACAGCTGCTTTGGAACAAAACAACCAGAGACTTTACCTGAATTGCCACACCTATTCACTCACCATCATATCACACATCTTCCCTTCAAAGGGCTTTCTCCTTGAGTTGCTCATGCATTTGTATCTTTCTATCTTCCTGAGAGCAGGATTCTGCACGGTGAAGGCAATGATCATTGCTTTTCTCCTCATTGTTTCTAATTAACTTTTTTTAAAGCTTTCCTCTTTGTGAAAGCTAACTGAAGATTCAGATTGAAAGGAAAAATGAGACACAGATTTGGGGACCAAGGACTCATCAACAGTGGTGATTTTAGCAAGAGATGCCCACTGTTGTTATTGCCATTGATCAGAATTTATGTATTTTCTTTGGGGATCACTGTAGGGAATATTGTAGGGAAAATATCTTCAAGGAAAGCTAGGACCACAAGTGATGGTGGAGTGTAAGGAGCAAGTGGAATTGACTGGGGTAGGAAGCATAGAGTTCCTTCCCAAGGAATCAGGTCGTTTCTGTGTTCTTTCACCTCTACCCTATAAGATCAAGTCTCCCTATACTGCTAACTCTAGGATTTGATAAGGGCCACATCCCAGTGTTTATCTTAGCTTGCATAAGGGCATGTGTATGTACAGTGAAATGTGTATTCTTGATGTTTTTCCAATAGCAGAAACTGAATTCACACTGAATTAGCATGCTCTTGGGTGATATTGATCATGTGACAGAAAAACTGACATAACTCTAATGTGAGAAATGTCCTTTTGTTCATTCTTTATGAAAAAAATTTAAACACTAGTGCTCTTGTGTGCACTCTCCTGAAAGATCTGTACAGAACCAAGCACTTGTTTATACGTATTAGTCTGTTGGAGATAATTACCAAATAGGTTGATTGTCCTAGTCTCAGACTGAATGACTTTCTCTTTGCCCTAGTCACAAGGAATTAATAAACCTAGATAGGAATGTATTTCCATTCTCTCAGCTTACAAATTTAAGTGGTTTATGTCAGCGTTGACCCAATTTAAGCCCAGTAATGTCAGTTCTCCTTATCTGAGCTCAAATAGGAATTAAGAAATATCCCGAATGTTGATGCTTATCCAAGCATTTGGGGGTGGGGGTGGGAGGGAATTGATGTCCAGGAATGGGGGCTAGAGTAAGGAATATTTTTTTTTTGAGTCTGCCCCAAATACTGTGCTTTATTGTGAGTGTTGTAACATTTGAAAAACTTGTGCCATAACTCTTTGGGACTTGGTGTTAAAAGAGCCAGTGGTCTTTCTTGGGTAGTGTACTATAGTGATTTCCTGTGACCCACCGCCCTGTGGGTCTGCATCCTTTGCAATAACACAACCTCAGAAGTAACAGTGAAATACTCCACAAAGTAGATGTCTTTCTGTTGGCACTCCTATTTAAATACAGAATCGGGCAGGGAGCATGTTCTTTGTTCTATACGAAATCTAGCTGTGGGTATTCATATTTTAATTGTTGAATGACTTACATGTTCTTGATGACTAAACTCAAACATGTCTTTTTCCCATATCAGTGTTGCTGATGGTTTTAATGAATATCAAAATTCTCCTGTTGTTTCTGTGAGCTGCTAGGGGCATTAGCTTCAGAGTGGCCAGAGAAGACATCATCTCCATGACCTAACTGTATTTTACCCGCTTTTCTTTCCCTATTCTCCTGCCTTACCCCCAGCCTGTTCCTTCTGCTGCTCTTGGCTTCTAAGTGCCCCAGCCTTCTCTCCAGACATGTACACTCCAGTTGGGAAGTTAAAAGGGCAGAGGGCCAGACCAGCTCTATCCTCTCTTCCTGCCAGTTGTTGCCCATTTGCTGTGTTGAACTCTGTGTAAAGTTATGCATCAGTCTCTCTTTGCTAAAGCTTTCTGCATGCCTTCTGCTCCCAAGTCTCTGGCTGCTTCTGCACATACCCTGAACACATTGTGCCTGTTTTCTATGATTGTGGAGAGTGAGTGAACAAGTTAAGTATGTAGCACAGTTTTCCTTCTGGTATTGGTCACAGTTATATTAGTGTCTATCTACATCTGTATTCTAACAATATTCTGTAATTAAAAGTAAAATTTTTAAAATCAAAAAGTGAAGAATTATTTTAGTAATTCAGCACCAATTCACAAAACAGCTTTTCATCAGATTCATTAAAATTGGGCACAATTGGTTTTTTATATTGATGCCTCTGTACAGATGTTCTTGTGGGAATCTGGGAAGTGTCTTCACATATTGGTCAGCCTTTTGGATATTGCCATATTTGGGGGAGATGCAAAAACCTAGACATTTCCTGTGAAGATTAGGCTGATGACAAAGCAACATGGAAATATTTGGTATGGGTAACTCATTAACTTTGGGGAAGGAAAACAAAAGCAAAAAAAAAAAAAAGGAAAAAAATGAGGGGAGGCCATATTGCTTGAAGGAGATATTTTTGGGTATCTGTTAATACTAAAACAGTTTCTACTAAATTAGTATTAGGATCCCAGAACAGAGAGATGTCTTAAAAATAGTCACAGACTCTCAATTCATGACAAAATTTCACAGTCTGCCTAAGGCAGTGATTATTTTCTGGTATTTTGTGGCCACAATCTTCAAATTTCTTACAAGTAATTTTATCTTGGGAAGCCTTTTTTTTTTTTTTAATGGAAGACCAATTTAGACAGAGGTAGGGAGTAGAAGTGCTTTAAACTGGGGGAAAATACAAATATGAAAGAAAATTTTTAATTTACCCTATAGCCAAGACTGGAAAGAGATTTTATAAATTATCAGACTTTTTGGGGGTGGGGGGTGATGAGGGGCTGTGCCACATGGCTTGTGGGATCTTACTTCCCCAACCAGGGATGAAACCTGTGCCCTTGGCAGTGAAAGCTCAGAATCTAACCACTGGATCTCCATGGAGGCAGATGGCATAAACATTTCTTAAAACTTTTTTTCTCCTTCCTACATGTTCAGCATTTTTTATTTCTGGAAAGGAAAGTTCAAGGAAAATGGTGGAGAAATTGACCTGGCACTTCTCCTTCAGGGTATTTAATATATTAATATTTTACCATTATTCTAATAGAGGCAGATTTCCTTCCCTGAATTTTCTCTAGGTGGCTAGCCCTTGGTTAGGGCTGTGCTTCCAGGCCATTAGGACTCCACTGAGTCCATTGAAATGATAATTTGTTAAATGGTTTCATAGTGTTTCAAAGGTTAGTGTTCCTGCAAAAAAGGAGTTCCTGTGCCTCAGGAGAAACTTACTCTTTGAAGCATTGGTTAGATACCCATCTCTGTACAGCAGAGGAGCAGCCGACTGGGACCTCCTTATTTCTAGGTGACTTCAAGATAAAAAGGTTGTTAGTGAAAAACAACTGAGGGGTAAAACGGATTGAAGAAAATTACCCTGTAATGACCTAAAATGGTGTCATGGTGAATCTCATTGTATTTATCTGTTTTCCTAAATGGTTCATATGCAAAGTCTGTATCATTTTTACCTTCTTCAAAGGTGCTTTTGTTTTTCCCTTTGGGAGAGACCGAGGCTGATATCAAAATCTCACTTTGAATTTCATAGCATCCCCTGTGGGCTGCCTTGTAGACATCACTTGGAAATTACCCAGGCAGACCTGAAACTGAATCTACCACTTTGTTCTATCACCATCATCACCTTTCACCTGCTACTTCTGTACTTCCAAACTCAGTCATGGTCTAGTCATCCATGCTAGAAACTTATATTTCATATTTGAAAACTCCTCCTTAAGCCACCCTTCCAACAGCAATCATGAAAATCAGTTGCATAATTAGTCTTCCAGTCATTACCTTGCCACCTCTTAAATATTTCTCAAATCTATCTACCTGCTTTCTCTATTGCCCTCACTTATGAAACCTTGGGCAAGTTACTTAGCTTCTCTGTTCCTTGGATTTCCCATCTGTAAAGTGGTGGGTAATTATACCTACCTCATAGAATTGCAAAGATTAAATGAAATAATAGAGCTCAGAATATTAGTTGCAATTATTTAGACCATCCCCAAGCTACATCCTGCTTACTGAAACAACCTCTTAATTGGTCCTCTCTATTTTCAACTCCCTTCCAACTATTCTCCCTAGCTGCAGCTAGAATGATCTTTCTGAAGGGCAAACCCATTCTTGCCATTCTTCTGTGCAAAACTTTCTCATGCTTTCCATTGCCAGTGGCACAGTGTGTGATGTGTGAGGAAGTGAACAAGATCTGGCCTCTGCTGCCCTCCTGAGCTTCTATTCTCTGCACTTTCCCTGCACTTGCAGCACTCTCCAAGCTGCATCTCTTTCTCTCCACTCTTCTGGTCAACTTCTCATCCTTCAGGTCTCCATGCCTAGCTTGTTCCAGAGAACCTTTCCTGATCCCACAAGACTGAATCAGGTGTTCCTGTTCAGTGTTCCCTGGGTTTATTCCAGTCAAAGCACTTTATTCCTGTTTTGTAAATGACTGTTTACTTCTTTGTCTCCTCCACTAGATTTTTATATCCTCCAAGAAATCACTGTGTTTTGCTCACCATTGTATCTTCAGTCCCTAGCAAATGTTTGACTGAGAATAGGGAGGCAAAAAAACATGTCTTGGATAAATGAAAGGAGTTGATGTATCAATTTCATTCCCTTTAGCAGGACTGGTGACTTCACTTCTGATTTTTCACCACACAAGCCACTCATAAAAGAAAGTCTGTAGAAACGGGAGGTATTCTGTCATTGCATATCCGGGGGGGGCTCATGCAAGAGGAAAAAAGGTTCCCAGAGGCTATGTGATCCTCCCAAGGTAAAACGAGGATAAAATCACCTACTCTTGAAGCATCAGTATTTGATGAATCATTGTCATCTTTGGAGGGTTATCTAGGATTAGACATTATGGCAACTTTGGTAAAATGTTGCAAGGCAAGCTCTCAATACAGGGAGCTGGGGCAGGATTCTAAACTCCCAGCTGTACATTTGGCTATTGGTCAACCTCTGAATTCTCCAAGCTGATAATTCTCCAAGTTGAGCATTATAAACTAATAGTTGTTAATATTTTGAGGAGGATCCAGATTCCTTTAAGAATCTAATGAAAGTTTTGACTCTTTTGAGAGTTCTTTATATATTTTGGTTACTGGACTTCCCTGGTAGCTCAGGTGGTAAAGCGTTTGTCTACAATGTGGGAGACCTGGGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAGAAGAAAATGGCAATCCACTCCAGTACTATTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTAGGCTACAGTCTATGGAGTCGCAAAGAGTTGGACACGACTGAGCGACTTCACTTTCCTTTATCAAATACATGATTTGCAAATATTTCTCCCAGTCTTTGACTTTTTATTACCTTAACAACGTCTTTCAAAGAACCAAAGTTTCACATTTTGATGAAGCCCTGTGTTCTAATAGGATTTTTACCCAAGATTTCCTTTTCTAAGTCTCCGTATTGATAGTTCTCAAGTTACAAGACTCAACCTTTGTTTTTTAGACGAGGGAGGAAAGAAGCACACTTTCTAGATTTCACTTTCACTTGGTTATATCCACTCTATTGGAATGTGGGTTTTAGCCCAAGAGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCGAAGAGTTGGACACCACTGAGCGACTTCACTTTCACTTTTCACTTTCCTGCATTGGAGAAGGAAATGGCAACCCACTCCAATGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTTGCAGAGAGTCAGATACGACTGAAGTGACTTAGCAGCAGCAGCAATACTGCCACTATACCAGAGCAACAGGGCCATCTTTCTGAGCCCTGTATGTTAAAGGGCCCTCCTCCAGTTGTACCTTTCCCCGTGGGAGCAGAGGAACATGACATCTAGAGCTCATACTCCTGCCTCCCTTTCTAGATCACCAACTTCAGTTGTCTAGGACCTTGGACTCCTTTTCCCCGACAGCCCACTTCAGGCCTCTTCCCCAAGTGTGTTCTCTTGAAGGCAAACCAAGCTCCATGTGTGTACCCATAGCCCTTGGTTTGGGAAGATGGACAGAGACTGGACTTGCAGCCACACAGGTGACCATGAGGGCCCTCCTGGAAGAGGACAAAGCCAGAATAGGAAGAGCAGGGGGGCAAGC EMBV3_16146 GATACTGAGCAGACCGCCCACACCTGTAATCTAACAGAGGCAAATGGATTCAGCAATGGG Gene BVV0102_082621 - 1 EMBV3_23999 GK000007.2:73757647-73778301 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217698 TCONS_00217702 TCONS_00217695 TCONS_00217701 TCONS_00217694 TCONS_00217699 TCONS_00217696 TCONS_00217703 TCONS_00217693 TCONS_00217704 TCONS_00217700 TCONS_00217697 1 XLOC_131561 Coding TCONS_00217695 XLOC_131561 Coding Coding PWWP2A 7:73760397-73781365 j TSS162058 6957 1 TCONS_00217695_4 343 0.0140865315509559 3 0.668335956503076 1.21127044199836e-49 6.85800871088503e-44 8.20490533527035e-58 1.89059918648775e-69 1.02936551875554e-39 4.91450795056266e-94 3.80294427789598e-62 9.03663023041063e-56 2.94838640528633e-42 5.09943503634052e-06 4.48635725647363e-06 5.97241310617232e-06 1.14022217317516e-52 2.15086435788577e-05 2.11962471424764e-24 0.00431087492593671 0.00326235889996332 0.00494048951064027 2.45126800581458e-106 3.17904364678744e-59 2.5813172062157e-48 0.00168158282071006 0.0019640907696248 0.0021700553417038 2.33108293051785e-55 8.01063887627051e-64 3.87067649099801e-31 0.000311801511022875 0.000168748605822096 0.000509571163184325 XM_002689348.3 PWWP2A PREDICTED: Bos taurus PWWP domain containing 2A (PWWP2A), mRNA. 0.0 1752 100.00 0.13942791433089 NM_052927.2 PWWP2A Homo sapiens PWWP domain containing 2A (PWWP2A), transcript variant 0.0 2266 92.66 0.221072301279287 TCONS_00217695_4 sp|Q96N64|PWP2A_HUMAN PWP2A_HUMAN PWWP domain-containing protein 2A; 0.0 576 94.00 0.871720116618076 0 coding 1 1 1 1 -0.0591863899433136 0.699910841878742 0.00996699497851073 0.888732012089114 GTTGCATTTATTGGACATGTCTAGTTGAGAGAGTGTTACAGCAAATGACATTAAATATTAAGCTGTCTGACAGAAACTCCTTACTGATTCAAGACTGAAAAGATCTATTTGAAATAACAGCAGCTATCATGGCATTGCTTAGAGCAACTATTGAGTATTTCCTGTTGAGTGTATGCCAAAATGTAAGACAAAAAAAATGGAATGGTATGCTTTGGGACTTTTGTGGGGAGGTCCATCCGTAGGTTTTTGGATTGTTTTTTAAAGTGAAATAGCTTTCAAGGAAGGTCACATAAACAGTAGGTGGTCTTTCAAGAAATGGAATTGTAGATGCTAACTTAATGGTTTCTTTTTTTCCTTTCATTTCTTTCAAAGGTTTGGGCCCCATGGGATCCCTGTGACAGTATTTCCCAAAAGGGAATATAAGGATAAACCCGAAGCCATGCAGCTCCAAAGTAATACATTCCAAGAAGGGACAGAAGTCAAGTGTGAAGTGAATGGTGCTGTTCCCAATGACCCTTCTCCCGTCCCGCCTCCTGAGCTCAGCTTGGCCGAAAGCCTGTGGACTTCCAAACCACCACCTCTCTTCCATGAAGGAGCACCTTATCCTCCCCCTTTGTTTATCAGGGACACATATAACCAATCAATACCTCAGCCGCCTCCTCGGAAAATTAAGCGACCCAAACGAAAAATGTACAGGGAAGAACCTACTTCAATAATGAATGCTATTAAACTACGACCCAGGCAAGTTTTGTGTGACAAGTGTAAAAACAGTGTTGTTGCTGAAAAAAAAGAAATTAGGAAAGGTGGTAGTGCAAGTGACCCTTCTAAATATGAAGATAAAAAACGGAGAAGTGAAAGCGTAACTACTGTGAACAAAAAACTGAAAACTGACCATAAGGTGGATGGGAGAAGCCAAAATGAAAGCCAGAAAAGAAGTGCTGTGGTTAAGGTTTCAAATATTCCTCACAGCAGAGGCAGAGTAGTCAAAGTTTCTGCTCAGGCAAATACATCAAAAGCTCAGTTAAATACTAAAAAAGTGCTCCAGAATAAAAACATGGATCATGCAAAAGCTCGGGAAGTGCTGAAAATTGCCAAAGAAAAGGCACAGAAGAAGCAGAGTGAAACCTCTACATCCAGAAGTGCGCATTCAAAAGTTCATTTCACACGTCGGTATCAGAACCCTAGCTCAGGCTCTCTTCCACCCCGGGTTCGTTTAAAGCCCCAGAGGTACAGGAATGAAGAAAATGACTCTTCTCTGAAGACCGGACTGGAGAAAATGCGAAGCAGCAAGATGGCACCCAAGCCCCAGTCCCGTTGCACCTCTACCCGCTCAGCAGGTCTCAACAAATGGCAGCTATTACATCAGACAGTGACGAGCGCTGCTGCTCCCTTACAGTGTCTGACAGACCACTGTGGATTCAGACTGGGAGCATTGAAGTTAACAGTGAAACGGGCAGCACAAAGACATTAGCAGGCTGCTGGTTTCATGGACCTGTACCACAATGACAGAGAACACCAGAGCATCAGGACTGAATGAAATTGGAGACTCAGATTTTTAAAGCTGCACTAAGAAGTAAATGTTCAGGCAGTGATTAAAACCAACAGTCTATAAAGAGGCACTTGCATATTGTGCTATATTAAACTGAAGAAAAGGTATTAGGGGAATATTTTATTAAAAAAAACCTATTGCAATAAATTATGCATGAGATGAGGAGGAAAGTGATGTGAAATACGCAAAGAACTCTTGAATTCTATGTGTGAAGAATCACTGACAGTACCTTCTTTTGAACGTGAAGTTCTCAGTACAGTTTGGACACGCCTAAAAGGCACAGGATGATGACAGAAATGCTGAATTATTTTTCATATTAAAACTGCTTTCTCCAAGGTTTACTGTTAATCAGCTCAGAAACGATGATCTAACATCCTACTAAAAGGATGGTAAAGTGTCCCTATACCCCACCAAGAAAATTTGGATCTTTTCTTTAATAAAGCAGGACTATGCTCTCTTAAATATACATTTGCTTGTTAGAACATATTAAGATGTATTTATTTGCCACCAGTATTTAATGTTTTCTGCACATTTTCATAACTACATTCTTAACTTTCAAATTCTGACTCCAAGTGGATAGGCTACTGTCAATCTTGGAGTGAAAACATACTCTCTAGGAACTAGTTCTTAATCCTGCTGAGCTGGAAAGGCTTTATTCTTCCTGTCCTTACTGATTTTATCGAGTTCACAAAAGGTGATAATATCTGAATTTTGATACTGACCTCTCTCCACAGAGAGCCCCTCTTTCTAATAAGTGCAAGAATTCCTCAGAGGTGTCCGATGGGACTTGATCCTGGGGAACAAGCAGCAGGAACCATAAAGACGGTGAAGTTTTCATGCATAAAGTATGAATTCTTATTCACAGAGACCATAATGTTTTATCTATGAAAATTACACATTATAAAAGACCTTACTTTTTCTTTTTTAATGAATGGAGAAAACATTGAGAAAACCAGATGAACTTGTTAGTACTACATTTTTAAGGCATTTTATATTTGATGGTGCCGTACTTTTAATAATATACCTGAAGTTTTTTAGTGGCAATACTGATTTATTTTTTAAACCAGAAAGGTAATCCATAGTGATTACTTAATACAAAAGGAAAAAAATGCCAAAAATAAAAATACAAAATTCATTTGAAGCAACATAAATGATAACTGAGCATTTGGCTTCAGTGCTCAAACTTTGCATAATCTTACTATATGTGTTTGGAATTACTTATTAACCCCACACTCAGGATTAACACACAGTTCTGGGTAAGTTTTAGAACATTTACTATACCAGCTAGGATCTGTTTTACAACCCTAGAAAAGGTAGGCAGTCTTGCTTCTAGCGAGTTTAATGCCAACCCTAATTACGCTGTAACTAAAAGTCTTGATTCCATTCTAAGATTGTCTTTATAGAAAATTTTTTATCATGAAGTCATTGTACATTTGATGAAGTCTGAAAGAGTCAGCTCAGGAACTGCAGCAGCAGGAAGCTCTAAACACAAGCGACGCTCTGCTCTGGCCCAGAGCTTAGGCTGGGGTCCCTCTTGTTCTTTCAGATCCGTAACCCAGCAGTACCACTTCAGGCTCATTTCTGATAACCTGATAACTCCCAGATCATAGCAGATTTTGCATAATCAAAACTTCTAATTGCAGAGTGATGGAAATGACGAAGTAACATAAAGGCAAAAAGAACTGGGAGAGATCAGGTTTTAAGTATCTAAACATTTTTTATGACAATTCTCAGTGATGTTTGTTATAAACCAGACTTTCATTTTTTTGAAAAATGAAACTTGGTGGTATTTAAAATCTAGACATACCATGTTTGCTATTTCACCTTCATTGCTTTAGTTGCTTAATATTTAAGCTTTGCTTCATGCTACCTTCATCTGTATTTCAAATCTTCACAAGCCTATTTCATTTTGTAGACTTGAATGACAACAATTGTTTCTCATCTAAACTATGCTGAGACCTAAATGTTAAAGAATGTTGTGTAACATATATTCAATAAAGTCTTGATTTTTTTAAAATTTAGTTATTTAAAAACTATTTGTTTACTACTTAGGAGTTAGGTTTTAAAGATTATTTTTAAACTGTTAAGATTCAACCACTTGTTCTCTAGGAAGCTGTTTTTAAGCAGCACTGCTTCCTTAGGAGAACAGCCTATAATCACTGGGAGATTTTATGGGATGTCTTTATGACCAAGGATGGAGGAAGGGAAACTAGCTTAATAAGGAACTTGTGCACAAACATTACTGTTTTCTGATAGAAACAAATAATCTACCATTCAGAGCTGGATGTAACTAAACATGTACTGTTGGGTTTGTCTTAATTTCAAGTAGTTCTACTCTTATGGATAAATGGTTGCTTCTTTAAAAGCTGAGTACCTCCAATCTGAGGGCAAGTGTTTGACCAGAAACACTAAGTTGTTAGGAAAAATTAGCCTCTGGACACCTACTGGACAGCTGAGATTTAAAAAGGCTGATCTAGAAACCTAAAGTCAGGTAAATTCTGTTTGTTTTTTTTTTTTTTCATTTAAGTAAAGCAATCCTTTAGAAGGCTGCCTGTTATTCCAGAGTATATACACAAGAGTCTTTAACTGCAAACATTCTCCCATTTCAGTTTACCTAAATGTGTAAGAAGGAAGCCACTGGAGTATCTCCCTGGGAATGCTGGCATGTCACTGCACATAAAAGTAAGCTGTTTTCTTGCTTTTATACGTGACAGCTCATTTCTACTCTTTCAAGTAATGATTCTTCCCTCAGTGCTTTGAAGAGAGTATACTGTAAGTGTTTCTTAAGCATACTTTTCTCTGGTGAACAGCACCCTGCCAAATCTTGGCTTATTCACAAAGAAGTTTCATGGCCTTTGCTTTGATATCAAAGGGTGATGACCTTGGGATGAAAGAATACAACTCAGGCATTCTGTGCCAGAGGAAGAAAGAGCTGGCTAAACCAGTGGCTAGGTCATTGTCCTAAAGAGTTAATACTTCTAGGATTAGCCCTTCATTGCATTGTGGAGCACGGTTTTAGAAGCAACCTCACATACAGGAGGCAAAATGAGTGGGTGATATTAGGATGATGCTTCTATCTCAACAGGCACTTCCCTTGTAGCTCAGTCAGTGAAGAATCTGCCTGCAGTACAGAATAACCTGCTTTACTCAGTAGAGACATGTATTTTAATCTTAGTTCTATCAGTTACCTTATTGACAGAAGAATCACTTAGTGGCCACACTGGCCAAGATGAGGTATGGAAAACAGGTGTCTCACTCAACTAGCTCGAGTTCTTATTCAGCCAAGGCCAAAAACACAGGTGACATCAGGGAACTCTACAGAATAGTTCAGTCAGGGAATAATCCTACTTTTCTGAATTCTGCCTGTGCCCAGGGCCTGAAGCCTGTGGATACTGAGCAGACCGCCCACACCTGTAATCTAACAGAGGCAAATGGATTCAGCAATGGGCAGTGCCCCGAGGTAAAGAGGAGCCTGATGTGTCCCTGCTCTAGAAACGCAGGGCCAGGGGCTTCAGTGAGACACAAAGCGACCTCACAGAACGCGCTTCCACAGAGCTGCTTTCATGCTGGTAGAAAGGGAGCGGCTGGAAAAGCTGCCTCCTGGCCTCTGGAGCCGACTGAGAATCCAGTCAGTCACACGGCTCTTGGAAATAAGACAGTTTCCCAGCTAACTCCCTGAGGTAGCGCTGCAGATAGCATATCTGTTCTGGGCAGCCAAACTATCCCTACACAACAGTCCTGTGTCCTTGAGACTAAGTACCAGAGAGTCCTCCAAAGCCTCCATCCTTTGAAATGTAAACACTTTCCCATCTCACACTGTTCCCTTGCTTCCCAACCCTGGCCTCCTCCTTGTCTTTAGTTTGCTTGACGATGCTCATGCTTGCTGATTTCTGACTTGGAGGGCAGTGTGCCTGGTGTGATGGGGTGTCAGATGCGGACCTCCGCTGGCACAGCACTCCACCTGGTACTAGGAGTTCCACTGTCTGCAGATCTGGCTCCTCACACCTGCAACTAAAGGCTTCCTGAAGAGCATCTGGGTTGATTCCCTTCACATCTGTCAATCATGACATGTTTGGAGAAGCCCCAGTGCCTGACTTGGGGTTGCCATCTGGGTAGGCTGTATTTTTTTTTTTTTTTTTAGCAAGGTACAACTAGCAGCTGGGACTTGATCTCACCCACAGATTATTAGCTGTGGGCTACCCTGGCAGTGAGGTGACAGGCTTTGCCGTGCTTCAGCTAAGGTGGGAGGGAATGTGAAAGGAAGCTGTAGGGAGTCTAATTCTAGTCTGGCCAATAGAAATTCTCAGGAGTTTATTCCTAGCTTGCAGCCCTCAGAGGGTTGAGAAATTAGAAGAAAATGGAGTATTTTTTTAACCCTAGAACATTTCAAACATCTGTAAAGGCAGACTGGTATAAGAAATAAACCCCATGTACCCATCTTTACCTTAAAAAATTACTTACTCACAGGAAGACTGAAATTTTTGATACTCTGAAATACGAGGACATCCTCACTAGTTTTCATAAACTAACCTCTAGTTTCCTTGATTGCCCTTTGGAAGTTCTTACACAGTCACTCTGATGCTCTATGGGCTGGCTGGTAGCAAGTAACCCATTTCTCATTTTCAGGAGTACTAATGGACTCAGTCTAGTATGAGCTCAAGGCTGCTCTCCAGACAACAGATAGTGACTGGAAACTGCCATTCTCTGCATTAGCTGTGCAGCTTCCCTGAAGAAAGAGAATTTCCAGCCACTTCTGGTGGAATGTTCACATATCAATGCTTCCTTTTCTAAAGGAAATCCAGATGAGAGAAGGACTCAGCTGCTTACTACTGAAGTGCAGAGAGGGGTAGGCTGCAAAGGATGAGGAACATCTCACTGAAATTGCTTCCAGGAGATTTTTCCTAGGGTGTGGGAATGTGTTATCAGGTACACAGTATACACCCATAGGAGGATTTGAGGAAGATTTCAGTGCCTTAACAAGTAAGGCAGGGTCAAAAGCAGAAGTGATCAGAGAGCAACATGGACAGAGCTGTGGGCTGGCAGTGACCCCTGGGCTGCAGGCTCAGTGAGACTGAGCTCTGGCAGCCAAGGGCCTTCCTTTCCCACAGGGGAGTGCACACCCAGAGCTGAGGAGGAAATGAGTTTAAGCTGCTGCTGGCTCCTGTCGGGTGTGGTGTCTCAGGTTTACACTCTAGTCTTGGAAGGTTATTGGGTCCTGTGCTTTAAAGATCCTTCTCACGATTAAAGCAGCCAGTAACTTCTTTCCATTCTCCTTAGCCTCCTATCATAGTCTTCCCCTTTGACATTCCAAGTTTTGCTAAACCGGCAATTGTAAGGCAATTTGCAGGTCTGCTCATTAGCTCCTGGGAGCAGATAACCTTCCGAATACACCTTCTAATCGGGCTTAG EMBV3_38600 TGGTCCTCGTTTATCTCCAGCCTGCCTCCAGTTCTTGGTTGGAATCTGTGGTTCCGTTGT Gene GeneID:100301071|LOC100301071:XM_002699098:100_cdna Constitutive 0 NULL GeneID:100301071 29 GENE LOC100301071 NULL similar to odorant receptor MOR83 EMBV3_41882 AGCCCAAGAGGGACCCTTCACCCGTGTCTGGTACAAGTACGAGCTCTGCCCGTTCCACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22403 GGAAAACTGCACCATTCCCAGCAATCTGGCTCCCTTTCTCCTTCCATTCTAGGTGCCCAT Gene GeneID:504519|CAP1:NM_001035010:59_cdna Constitutive 2 NULL GeneID:504519 3 GENE CAP1 MGC127425 CAP, adenylate cyclase-associated protein 1 (yeast) EMBV3_17186 GGTCTTCATTGCTGTGTGGGCTTTTCCCTCTATTTGCATGAGCAGGGGTGGCTATTCTCT Gene BVT0102_168864 + 0 NULL GK000005.2:61498554-62043142 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199700 1 XLOC_121352 NonCoding TCONS_00199700 XLOC_121352 NonCoding NonCoding - 5:61727183-61730881 - TSS149268 3698 4 TCONS_00199700_5 89 0.189832341806382 1 0 0.000386316529206532 0.000391286496197134 0.000315306561482769 0.000258242099322641 0.000281705120389069 0.000436250017604217 0.000168474834978388 0.000327084864690554 0.000170689720827722 5.56313719204912e-06 0 0 1.08625978997315e-05 3.18009519463e-05 3.98015327084603e-05 0 0 0 0.00039558474449687 0.000447924627996033 2.38064092092025e-05 0 0 0 0.000170495201167407 5.14406466617737e-05 0.000324804293267052 0 0 0 XM_005206167.1 SMUG1 PREDICTED: Bos taurus single-strand-selective monofunctional uracil-DNA glycosylase 1 (SMUG1), transcript variant X1, mRNA. 2e-48 199 82.74 0.0527312060573283 0 noncoding 0 0 0 0 -0.313894574939931 0.0384453530002959 -0.0172664643051273 0.742357380518378 TCGAGGATGCCTTTTATTTCTAAAAATGACCCAGTCCTTTTCTCACAAAATCAGATTATGTTGTAATTTGTTTTCTGCCTGAACCTCTCCTGCTGCTACTAGACTATAAGCCCCCTGAGGGCAACCACTATGTCTTATTCACTGATGAATTCCTTCCAAGAGGCTGCCTGTCACAGAATGGATATTTGATCAATAGCAATCAATGAATGCAAATATGTCCCTACTAAGTCCTCAGTGTCCTGACAGAGACAGAAAACCAACAGACCAAAGTCAGAGCTCCTGGTATGGACTGTGAAAGGAATGTAAATTTGGTTTTAAGGAAGCATAAAGGAGAAGCATTGACCCCAAGTAGGTGAAATCAGGGAGAAAAAGTGTTGAATCGTTACAAAAATTGTGAGATAAGTGCTGTTCCTTTCATTTGTATCAATGAGGGAAGTGAGGTTTTATAACTCTTAAGACTCAAGGATTTCAGTCAGAAAGACATGGGTCTTGAACTCATGTGTGTGCATCCAGACTTTTTCCCTGACTCTGCTGTCTTTCTTCCCCAAGTTCTGAGGAAGTGGCCAGGAGCTCTGTGAGCCTCTGAATCACTTGAGATGGAAGAAGTTTTGTGTTGTGGTGTCTTTGAGCTGATAGAACACTTCCAAGCTTCTTCTTTGTTTCAGATGGTCCTCCTGAAGGCACGGAGTCTGATAGGTACAGCACTCTCTTTTTTAAAAATTATTTATTCATTTATTTGTTTTGGCTGTGCTGGGTCTTCATTGCTGTGTGGGCTTTTCCCTCTATTTGCATGAGCAGGGGTGGCTATTCTCTAGTTGTGGTGCTCGGGCTCCTCATGAAGGTGACTTCTCTTGTTTTGGAGCATGGGATCCAGGGCGTGTAGAGTTCAGTAGTTTTGGCCTGTGGACTCAGTCATTGCAGCCCCTGGGCTCTAGAGCGCAGGCTTAATTGCCCTGAGGCATGGGGGATCTTCCTGGACCAGGGATCAAACCCATGTGTCTTGCCTTGGCAGGCAGATTCTTTACCACTGAGCCACCAGGAAGCCCTAGTAAGTGCAGAATTCTTGTATCTCTATTCCGAATTGTCCATATAATGACCAATAAATGTCCAATAAATGAAGTGCTATTTCAGCTTGTTTTTTAATCTTCAGGGATATATTGATTAATAAAAACATAAAGTGCCTTGGCTTCTTGTTTTGTGATTATAAAATAAAAGTATTTAAATTCCAAAAACAAGTTTGGTGTGCCCATCCTTTTTCTTTTCAGTTGTAACTCCTGTTTTGATCTTTCATGCTCCAAACATCCTTTCGGTGGTTTCAAAAGATAACTTCAATACTATTGGTTATCAATTTAATGATGGCTTTTCAGTTTCTACTCACTGGATCAAAATGTTAACGGACCTTTGTCTCTGCCATAAATCCCATCAAAGTGTTTACATCTATCCCAAATCTCTTTTAAATGCAAATAAACAAGTTCAGCAGAGACACAAACACCACGTGGATAGTTAACAGCAGCCTGCACTCTGTTCCAGTCGTTAACTGCAGCTTGCAGAGATTCTTGACAAAAAAAGAAAAAGAAACAAGAAAGAAAAAGAAAGCATGGATGGTCTCTTTAATGAGGCTTTCCTTCTCATTTATCAAAGACGGTGTAGCTTTGCCCAGCTGGTCTGGTTTGAAAATCAGAAAATCACTTAATCTGATTCACATAGAAGACCCCTCTAGCAGGTGAAGAAATTCATGTATTAAGAAATATGTTTCTTTGATTTATTTTTTTAAGCCATGTCCTTTGCCATGGGTCATAAGATTTAGGGCCTATGCTAGAGGTCATTGAAGAACACCAAAAATCTGACATTTGAGTAGAAAACATATCTTTTTTCTTTCTGATTTTATTTAAGTGTCTTCCCAGTTGGGATGGTTGAGCAAGCATTAGAGGGAATTATGGGCTTCCTATGTGGCTCAGCAGCAAAGAATCTGCCTACAATGCAGGAGATGCAGGTTCAATCCCTGGGTCGGCAAAATCACCTAGAGGAAGGAATAGCAGCCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGATAGAGGAGCCTGGCAGGCTACAGTCCATGTAGTCGCAGAGCTGGATACAACTTGGCGAATAAGCATGCACGCATGGGGCTGGAGAGTGCTTAGAAATGCTCAGATTCAGACCCCTCATTTCCTTGGGTGTCAGTGCTGACTCAGTAGCTTAACCAGTTTCTCACAGATAGTTTGGGGGGCACTTGTGAAACCAGAAAATAGGTGGTCCTGTTTCTGACCAGAATTGTTTCCTGCTACTTCACAGTGGTAAATTAGGCAAAAAAAAATTTCCTTCTATAGAGAGTGAAATATGCAACAGTGTTTTAAATCTCTTTGGCATAGTTTGTTCAGCTAAGGACACACTCAAAGCTCAATACAAACGGTCTTAAGTGACAAAATAGAACCTAGTAGCTCATGCAAGACAAAGTCTAGAACTTGAAGCAGGCCCAGATCTGTCTTAATTTCTGATCCTCTGACATCTTATCATCGTGGTTTCATTGTAGGCTCCATGCAAGCTGGCTGCCCACAATGCCAGGACTGCATCCTCTCAGGTTCGAACCCAAGGCAAAAGAATATCCCTCTCTTCTCCAGTAATTTGACCTAACACGTACTAGCTCATTTGGGTCACATACCCACTTGCAGATTTATCCTTATGGCCTAGGGGAGTGATGCTTTCCAGGGATGGGCCTGAATCACGTGCCTTCGAAGGCAAGGACATCATCAATTCTAACAGAAGCATTGAGAGTAGAGAAGGCTATTCTCTAGAGGAAGACTGGGACATGTTTACCTGACGAAGGTTGAGTGGATGTGGACAATACGGATAATCATTACAAACCACATTTGATGACAGTCTTTTCAGAAATCAACAGCTTCCTTTCCTTTGTTCATTTGTAAATTTCTCTCAGCTTTAGCCCAGCAGAATCATAAATATGCAAAGAACAGTTCAAGTCCTATGGGAAAGAGTATGCTTGAATATGATAATGATCCTTTCATTAAAATGTAAGTTCTTATTATTTTAGAAAAAAAAAATACATGGTGAAATTTTAAAGCAATAACCTGAGTTGACTACCGATCGGCTAGAGCACTTGGGGCACACAGGCAGAGGTCTCCGGAGGAGAGGAGCCTCTTCAAGCTCGGCTGAGTCCTTCTTTCCTACCGCTCACCCACTGTGCTCCTCGGTGAATATTGCCTCAGTTAGCGGGCTTCTTAGCATTCAATTGCTGCAGAATTTCTTCCTCATTATTCTAATTCTCCTGCAGCAAACAGAACGCAAGTCACCACACACCAATTGAGAAAATTTCAGAGTCCCTTTTCTTTGCTATCTGGGCTGGATAGTTAAAAAGAGTTTAGATTTAGTTTGACCACAGAGAAATGCAGTGAGTCTTGACATGAGCCTTCTCAAGCTCCCAAAGCCCTCTTCTGTGGTATCTTAGATTTCCAAGCCTGGTTTGGTGGTACAGCAAGCACCCGGAGTCTCGGTATTTTAGTGCCTTCTTCCTACTAATTGTCCTGAGGATGAGAAGAAGTACTCCTGGCCGTAGGGCAATGTCATCTGGGATGCTCCATTTGAGAACCAGTGGGGCCCCTGGAAATGGACCCCATCCATGCCTTTAGTGTGAAAGTGGCTTCACATTGTGAGTCCAT TCONS_00192197 TCONS_00192198 TCONS_00192199 TCONS_00192200 TCONS_00192201 TCONS_00192202 TCONS_00192203 TCONS_00192204 . 3' 228416 TCONS_00192197 TCONS_00192198 TCONS_00192199 TCONS_00192200 TCONS_00192201 TCONS_00192202 TCONS_00192203 TCONS_00192204 . 3' 232113 EMBV3_10977 TGCACTGTGGGGTTTTGTGGAATTGGGAGCCTAATTGATTTCATTCTTATTTCAATGCAG Gene GeneID:514249|TM2D1:NM_001079593:57_cdna Constitutive 0 NULL GeneID:514249 3 GENE TM2D1 NULL TM2 domain containing 1 EMBV3_08972 TTAGCTTCTACTTTCACGAGGCGCTGAGCCGACAAACGACTGCTTCAGAAATGAAAGCGC Gene GeneID:535460|LOC535460:XM_002687548:549_cdna Constitutive 0 NULL GeneID:535460 5 GENE LOC535460 NULL hypothetical LOC535460 EMBV3_36278 GGCAAAACTCTTGTGTTGTCCCAGAGAGAAAAGCTGTTCAGTACCAAGGCCCAGAGCTCT Gene BVT0102_040676 - 0 NULL GK000015.2:30455936-30464909 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060974 TCONS_00060973 TCONS_00060977 TCONS_00060971 TCONS_00060975 TCONS_00060972 TCONS_00060976 1 XLOC_036884 Coding TCONS_00060971 XLOC_036884 Coding Coding USP2 15:30462850-30467397 j TSS45497 3144 1 TCONS_00060971_1 291 0.02735368956743 11 0.310822701275847 0.00655371117594381 0.00473078113181192 0.00515130160174904 0.00451402509893727 0.00351842290417739 0.00243819874121058 1.6757986729098e-10 0.00436345128002079 0.00175501296545793 0.000436349009723451 0.000654826005675727 6.7108948225982e-05 0.00025095568582142 0.00177434034942602 0.00149701167500106 0.000621162022381482 1.17855187220795e-10 0.000742158760911427 0.000374924279144976 0.0064129847877991 0.00224646102593915 0.000464555860256644 0.00109164759448259 0.00025061616212154 0.00434920898781891 0.00277087104868986 0.00290745300335285 0.000347226495191048 1.05175916696715e-56 6.44420305919188e-05 XM_005215965.1 USP2 PREDICTED: Bos taurus ubiquitin specific peptidase 2 (USP2), 0.0 4754 100.00 0.838104325699746 XM_005271721.1 USP2 PREDICTED: Homo sapiens ubiquitin specific peptidase 2 (USP2), 0.0 2522 81.58 0.837468193384224 TCONS_00060971_1 sp|Q2KHV7|UBP2_BOVIN UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2; 0.0 619 100.00 0.996563573883162 2 coding 0 0 0 0 0.0851931454226611 0.490631127433026 0.0323583589161451 0.611260653721591 ACTTGTAGGCCAGGTGTACCAGAGGGCTCTGAGTGTTAGTGCCTGAGTAACACGCGGGAGCTGAGAGACTACTGCCTGCAGCGGCTCTACCTGCGGGACCTCAGCCACAGCAGCCGTGCTCACACGGCCCTCATGGAAGAGTTTGCAAAACTAATCCAGACCATATGGACCTCATCCCCCAATGACGTGGTGAGCCCCTCTGAGTTCAAAACCCAGATCCAGAGATACGCACCACGCTTCGTCGGCTATAATCAGCAGGATGCTCAGGAGTTTCTTCGCTTCCTTCTGGATGGGCTGCATAATGAGGTGAACCGGGTCATAGCGAGGCCCAAGTCCAACACTGAAAACCTCGACCATCTGCCTGATGATGAGAAAGGGCGCCAGATGTGGAGAAAGTATCTAGAACGGGAAGACAGTCGGATCGGGGATCTCTTTGTTGGGCAGCTGAAGAGCTCCCTGACATGCACTGATTGTGGCTACTGTTCTACGGTCTTTGATCCCTTCTGGGACCTCTCTCTGCCCATTACTAAGCGAGGTTATCCTGAGGTGACGTTAATGGACTGCATGAGGCTCTTCACCAAAGAGGACGTGCTTGATGGCGATGAAAAGCCGACGTGCTGTCGCTGCCGAGCCAGAAAACGGTGTATAAAGAAGTTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGAATCCAGGATACGAACCAGCAAGCTCACAGCATTTGTGAATTTCCCACTACGAGACCTGGACTTGAGGGAATTTGCCTCAGAAAACACCAACCACGCTGTTTACAACCTGTACGCCGTGTCCAATCACTCCGGAACCACCATGGGCGGCCATTACACAGCCTACTGCCGGAGCCCGGTGACAGGCGAGTGGCACACGTTCAACGACTCCAGCGTCTCCCCCATGTCCTCCAGCCAAGTGCGTACCAGCGACGCCTACCTGCTCTTCTACGAGTTGGCCAGTCCGCCCTCCCGCATGTAGCAACGAGGAGCTACATCCCATCCTCCCTTCCCCGTGGTGGCCCCACAACCTAAGTTTTTTTAAAAAGACCAAAAAAAGGCAAAAAAAAGTCCTGACAAATAAGAGGAAAATAAAGGAAAGTGAAGCTGCAGAGCAGGAGTTGCCGCAGCCTGGCCGGAGCCGGGAGTGGGGAGCCCGGTGCCCCAGAGCCCTGCCTGGTAGGGAAGATTGGCAGGACGCAGACCGAGCCAGCACGGTGCCCTCGGCTTCTCATGTCTGCATTTGTAAGCGCGTGGTTCTTTTCCCGTGTGTGATAAACCGCAGCCCTCGGTGGGGAGAAGATCCTTGTCCACGGGCCCACTGGCCTCGGCCCAGCCCCGGCCTCCCAAGAACACAGCGCCCTCTGGAGCCTGCTGGGAGGATCGCCGCCTGGAACGCCGCCCGTCTTTACCTGGACCCCGCTTCACCATTCCAGGAGCAAGAAAAACACCCATGAGCCAAGAGCCCTCTTAAGGCTGCTAACTCCAGGGGGACAGATGAGGGGACGTCTTTGAAGAAAGCTGTTTTTGATTTTTAAAAGCCCAACTTTTTTTTTTTTAATTATCGTAACTAAAGTTTTCAGACTGGAGATGCTCTCTTTCACACCTCGTCACAGCTGGGATGTTGTGCTGGTCTTTTTTTTTTTTAATTCTACAAGTACAACTTTTCTAGTGCTAGCCCCCAGTGGTGCTAGGTGGGAGTTGGCCAGGCCCAAGCACAGCCACAGTAGACCTGGGATCTGACAGGTTTGGTGTTTTTTTTTTTTTAATGTTTTGGATGGAATCTAGTTGCCTCCAAGAATTGTGCCTTATAGTGTTTGGGGACCAGGGGGTAACTGCCCCTCCCTGAAATATCCCTCAGCCTCTTCCCTTTTCCCCAGTGCCATGTCCAGAGCTGCCAGGGAGCTCGGGGTCACACCCACAGCCCCTGGCTCGTTTCGCACTGCAGTGAGGTGAAGAGAGTAGGTAAAAGGAAATTCTTCTGATAGTGTATCAAGTTCTTCCCGCCAGCTTCCTCTAACCCAGCCCTGGTCTACTCCCCAGCTGTTGGAAGGATAGCACGAGCCCCTGACCCTTGAGCTTCTTTCACCTTTAATTTATTCCCCCTTAACTTGCTCCTTCTCCCCAGCCTCCCTGCCCCACCCCCCTTCTCAGAGCCTCCTGACATAGGCCCTTTGGACCGAGTTTCTCAGGGATGCCCATGCCACCCCCAGCTCCCCTTGGCATCAGTCTGCAGTTCAGCCTGGGAGCTGGAGCCTGGGTGTCTGGGGACATCTTGCCTCAGTTGTATGGTTCTTCCCCATGGGCTTGATTTTGCTCTTAAGTTGTCGGGCAAAACTCTTGTGTTGTCCCAGAGAGAAAAGCTGTTCAGCACCAAGGCCCAGAGCTCTGTGCATGGTGCACTCTGCACACCCACACAGCTGGGCCCTGCCTGTGCCCCTCGAGGGCAGAACTCTCCAGTGCTTCCAGGAGGCAGCAGAATAAGACACCCTGAGTCTAACTGGCCTGACACCCTTCTCCAGGGAAGAGCTGTGAACCTGAGCCAAAGGGCTGGTGTATACACTTGTTTACCGTGTAAGCAAGAGTAGATGAATGTGTGATGTACAGTGGAACCTTGTACAGAATAAATCATAGCTTTGAGAAATAAGCTGATAAGTGATGGACTCTTGATTTGGGAGAGGTCCGAACCCAGGAAGCGCTCCTAGCCTATCAGTGGCCAGATATTTTACTGCTTCAACCAGGCTGTAAATTCCAAGTTCTAGAAAAAGTAAACTACCTGTTCTAGAAAAAGTAAACTACCTACTTTTTACTCAATTCTGTTTTTAAAAAAGGCCAGAATAGTACTTACTTTGAACACGATATTCCTCATCTGGATTCACTGACATTTTAACTTTTTGCCACATTTGTTTATGTATACACTTTACTCTTTGGGGTGAAACGTTTAGGGGGTGAGGCGTCCTATTACCACTTCTGAACACCTCAGCGTGTTTCTCCCATGTAACCACAACCCTGGCTTCACACGGAGGAAATCACCTCTAACAGACGTCTCTCTAAATGGTCTGTTTTTTAACTGCTGGTATGGGCACCCTGGTGGTTCTCTATTGACAATTCAGGTCCC EMBV3_31736 GACGTCTGTTGTACGTGCTGAGCCCCAGAGTCGAAGACTTTCCAACGCTTTTCTCTTCAC Gene GeneID:404155|LAPTM4B:NM_205802:15_cdna Constitutive 0 NULL GeneID:404155 14 GENE LAPTM4B NULL lysosomal protein transmembrane 4 beta EMBV3_40520 AAGGAGGGTCCGAGGCACCACGAGGGAGTTAAAACGTCCACCGGTGCGTTATTCTTAAAA Gene BVV0102_430087 + 0 NULL GK000015.2:50827783-50840326 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134534 1 XLOC_081439 NonCoding TCONS_00134534 XLOC_081439 NonCoding NonCoding LOC100847474 23:27323580-27326228 = TSS100266 1439 3 TCONS_00134534_3 36 0.263377345378735 5 0.45825462788062 0.000908457865496402 0.000703036722007526 0.000855818098003108 0.00106109117668082 0.00104049470204135 0.000450089452861121 0.000789795389691947 0.000238980728797311 0.00096037636265381 0.000945777833374952 0.000458300716095404 0.000348156183888618 0.000368285423096151 0.000686620419373947 0.000310998057127874 0.00497530945648941 0.00159316620425996 0.00470329506305047 0.00046708394853263 0.000505962956853137 0.000270614407902653 0.00121748009637307 0.00146486398784321 0.00445643076364507 0.000371561419614056 0.000553299694463599 0.000149652539151495 0.000862616826921034 0.00115406997100106 0.0017785297343821 NM_001113538.1 C15H11orf34 Bos taurus chromosome 15 open reading frame, human C11orf34 (C15H11orf34), mRNA. 2e-23 114 72.77 0.115357887421821 NM_001040438.1 C6orf48 Homo sapiens chromosome 6 open reading frame 48 (C6orf48), 3e-28 131 71.90 0.206393328700486 0 noncoding 1 0 1 1 -1.5850610590777 0.0541680984378436 -0.00689780666133062 0.931100251887279 ACCGCCCCTGCAGTTCTCTTTGTTCGGCGAACACGCACAGAGTGAAAATGGTTCCTCGGCGGTTCCCCAGTTGTCTGCTGCGGAACCTTCGCCAAACCAGGGGGAGGCTACAGCCTGCGCCGTCTTTGCACAGCTACCGGCGTGCAGGCTCCTGATTCTCGAAGGAGGGTCCGGGGCACCACGAGGGAGTTAAAACGTCCTCCGGTGTGTTATTCTTAAAAGAAGGCCTGAGAGCTTTGGAAGCCCAGCCAGGGCAGTACTCCTTCACAGAGATTCCAGGCTAGCCTGGTGACTGAAGGCCTAAGGTTTAGAATTCTCTTGGAGAAGCACTTTTGGGGTGGCTGGGATGTCCAGGTGATGGTTCCTGCCACTTCAGCAACAGGCTGGGACAAGAAGTGGAGAGCAACATGCCTTCTACCTGGGTACTGTGTTTTAGGATTTTGCTGATGCAGAGGATGTCCTACCTGGTGTTGGTCAGATCCTTGGAACTTCACATGTTTCCTGCATGAACCTGTGTGAGCAGCTGTCAAACTCCGGTGGAGAGGGGATGGGCTGATTAGAAGTTTGGGGACCAAAGTCAATTAGGTGATCTTTATTAGAAAGATTGCAATAAAATGTTTTAAAGCAAATAAAAATAGGTGGGTCTGAGCAAAAACAAGAGGGTACAGAAAGGTTTAGGGATGTGAAAGTGAATGAGCATCAGTTGACATCTAGCTGTATGTACCTCTTTCCAGCTACATTACAAAAAACTAAAATTAGGTTTGTCACATATTGACACCAATGTTGAGGATTTCTAGATGGAGTACCATAATATTTTTAATATTTGAGGTTTTAATTATACTATTAACACAATTATTGAGTTTTCTTTTTGATAAATTGGTGAAAACATAGGTTGTCTGGGTATATTCTTAGAAGAAGAATAATCCTGGTGGTTGTCAGGAGCTGGGAATGAGGAAGTGAAGAAGTATGTAATGGGTATTGTTTCACTTTTACAAGGTGAAAGAGCTCATGGGGATGGATGGTGGTGATAATTGCTCAGTGTTATGAACATAGTTATTACCACTGAACTGTATGCCTAGAAGTGGTAAAGATTTGGGGCGGGATAAATTGGAAGATTGGAATTGATACATACACACCACTAAGTATAAAATAGATAACTAATAAAGACCTGTATAGCACAGGAAATTCAGTGCTCCGTAATAGTCTATAAGAGAAGAGGATCCCAAAGTGTATGTATAACTGATTCAGTTTACTGTATACTTGAAACTAACACATTGTAAATCAACTATACCCCAATAAATTTTTTTAATGGTAAAAACATGCTAATTTTATGTGTATTTCACCACAGTTTAAAAAATTGGAGAAAAAGTACCCTTTGCTCCTTTCTGTCACTGTCAGAAAGGTGATTCCCCACTAGCATGTATAGAGTATGCTGTGCT EMBV3_07061 GCACGGCTCAGTCTGCTGTTTTGATGGCTACAGGCTTTATTTGGTCAAGATACTCACTTG Gene GeneID:616718|BRP44:XM_002685819:24_cdna Constitutive 0 NULL GeneID:616718 3 GENE BRP44 NULL brain protein 44 EMBV3_33460 TCTGCTCAATGACGAGAGGGTTCTGAAGGAGATCCAGAGCACGCTGGAGGGAGACCGAGG Gene GeneID:539545|LLGL2:NM_001099098:11_cdna Constitutive 1 NULL GeneID:539545 19 GENE LLGL2 MGC155119 lethal giant larvae homolog 2 (Drosophila) EMBV3_13954 CATTGACAAAAAGATACTGTTGCAGTTCACCAATTTGTCATTCTGATGTACTTGCAGTGC Gene BVT0102_162217 + 0 NULL GK000003.2:66993525-66997924 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173639 TCONS_00173640 TCONS_00173638 TCONS_00173641 1 XLOC_104404 Coding TCONS_00173640 XLOC_104404 Coding Coding NEXN 3:66993435-67054505 j TSS129037 7994 1 TCONS_00173640_4 597 11 0.869279012264815 4.24620217181519e-08 1.28429077967393e-08 4.46820603936317e-08 4.08449140138305e-09 5.28471444423631e-05 1.22099661382374e-11 6.5435732395432e-05 0.000194180882353191 5.09597650296403e-09 2.88376538242173e-12 3.16847168098457e-62 3.67262329568286e-08 1.00048461939641e-08 5.37758415619629e-05 0.000272350174152268 3.90509163608264e-19 0.000218776744766096 0.00147151773295173 2.23786075316754e-09 2.4425358218713e-09 4.70555042031249e-11 0.000117491735983899 1.85477592809743e-21 0.00113946231730331 1.46821122430862e-08 9.34460039208429e-22 8.75015665277456e-11 8.72430777274791e-07 1.0936106431399e-09 0.00252121970151288 XM_005204431.1 NEXN PREDICTED: Bos taurus nexilin (F actin binding protein) (NEXN), 0.0 3846 98.11 0.272204153114836 XM_005271310.1 FUBP1 PREDICTED: Homo sapiens far upstream element (FUSE) binding protein 1 (FUBP1), transcript variant X2, mRNA. 0.0 4156 86.77 0.433324993745309 TCONS_00173640_4 sp|Q0ZGT2|NEXN_HUMAN NEXN_HUMAN Nexilin; 0.0 965 91.24 0.988274706867672 1 coding 0 1 1 1 0.0242714711238661 0.851440275153356 -0.00443251556294282 0.936684598711212 CTCTGCTCTCAGCAGTAAAAGGAAAGTTGGCTGAGGGGCGACGCTTTGGATGAAGATGAGGTGGTGGTTTGGCTACTTAGACCCCAGAACCGATAGCTCAGCTGAGAAGCAGGCCCTAGAGCAAACCGTTAGTGGGTAGAGGGAAGGCAGCTGCAGCCTGTTTCCGAATCCCACTCCAGTAGCTCCCGCTCCTCACTGGGGAGGCAGCTTCCTTTCCCCGGAGCCCGCCGGGACGCGAAGGCGGACCCGAGGGGAGGGGGTCAGCTCCGGGATCCAGAGTCGGGCGACCGGCAGGTCCCGGCGGAAAGTTGGCAGCCACCGCCCCCCTCGCCCGCCTTCCTTCTCGACTCTCCACCCCTCTCTGGGCGATACGGCGGAGGCGGGGGTTGGGGGAACTGGCCTCGTGTTTTGGAACAGCTGCAGCCGGCTCTGGGCCCGCCTGGAATGCGGGAACAGGCTGCGCACCAGGACTTTTATGGAAACTTGCTGTTGGAGCGGGCGGCGGCGGCGGCGGCCAGAGAGATCGCAGCGGCTGGAGTGGCGGCTGGAGCACCCGGACCCCTGCCCACACCCCGGCGCCCGACGCGCACAGCCTCCCCGCGCGCACCCCGGACCTTCGCGTGTCGCTGGCTTGAGGAGGGAGCAGAAAATTACAAAGCTTCATAATCACCCCAAGACCACATAGAGCAAACATGAATGATATTTCCCAAAAGGCTGAGATTAAAGAAATGCTTGCTTCTGATGATGAAGAAGAGGTATCTTCTAAAGTAGAAAAGGCTTATGTCCCAAAGCTAACAGGAACTGTTAAAGGTAAATTTGCTGAAATGGAGAAACAAAGACAAGAGGAACAAAGGAAGAGGACGGAGGAGGAACGAAAACGCCGAATTGAGCAGGACCTTTTAGAGAAGAGGAAGATACAACGTGAATTAGCAAGAAGGGCTGAGCAGGAAGGAGATGAGTCACTGCTTGTAACAGTGGTACCTGTCAAATCACACAAAACCTCTGGAAAAATAAAAAAGAATTTTGAAGATATAGAAAAAGAACGAGAAGAGAAGGAAAGGGTCAAGTATGAAGAAGATAAAAGAATAAGATGTGAAGAGCAACGCCGATCTCTCAAGGAAGCAAAGTGTCTTTCGTTGGTCATGGATGATGAACTAGAAAGTGAGGCAAAAAAAGAATCACTTTCTTCTGGAAAATTGAAACTGACTTTTGAAGAATTGGAAAGACAAAGACAAGAAAACCGAAGGAAGCAAGCTGAGGAGGAAGCAAGAAAACGTTTAGAAGAAGAGAGGCGTGCTTTTGAAGAAGCAAGGCGGCAAATGGTAAATGAAGAGGAGGAAAACCAAGACACAGAAAACATTTTTAAAGGGTACCGCCCTGGTAAACTCAAGCTCAGTTTTGAAGAAATAGAAAGACAAAGGAGAGAAGATGAAAAAAGGAAAGCAGAAGAAGATGCCAGAAGAAGAATAGAGGAAGAAAAGAAGGCATTCGCTGAAGCAAGGAGAAGCATGGTAGTAGATGATGACACCCCAGAGATGTATAAAACAATCTCTCAAGAATCTCTTATACCGGGAAAACTGGAAATTAATTTTGAAGAATTATTAAAACAAAAAATGGAAGAAGAAAGACGACGAACAGAGGAGGAGCGGAAACATAAACTAGAGATGGAAAAACAGGAATTTGAACAACTGAGACAAGAAATGGGAGAGGAAGAGGAAGAAAATGAAACCTTTGAACTGAGCAGGGAATATGAAGAATTAATCAAATTGAAAAGGAGTGGTTCTATTCAAGCTAAAAATTTAAAAAGCAAGTTTGAAAAAATTGGACAATTGTCTGAAAAAGAAATTCAGAAAAAGATAGAAGAAGAACGAGCACGAAGAAGAGCAATTGACCTTGAAATTAAAGAGAGAGAAGCAGAAAACTTTCATGAGGAGGAAGATGTTGATATTAAGCCTGCAAAAAAAAGTGAGGCTCCATTTACTCATAAAGTGAATATGAAAGCTAGATTTGAACGTATGGCTAAAGCAAGAGAAGAAGAAGAACAAAGAAGAATTGAAGAGCAAAAGTTACTACGCATGCAGTTTGAACAAAAGGAAATTGATGCAGCACTACAAAAGAAACGAGAAGAGGAGGAGGAGGAAGAGGGTAGCACCATGAATGGGTCTACCATTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCGTGGTTTAAGAAGCCTCTAAGAAACACATCGGTTGTAGACAGTGAGCCAGTTAGATTTACCGTTAAAGTAACAGGAGAACCCAAACCAGAAATTACATGGTGGTTTGAAGGAGAAATATTGCAGGATGGAGAAGACTATCAATATATTGAAAGAGGAGAAACTTACTGCCTTTATTTACCAGAAACTTTCCCAGAAGATGAAGGAGAGTATATGTGTAAAGCAGTGAACAGCAAAGGATCTGCAGCTAGCACCTGTATTCTTACCATTGAAAGTAAGAATTAATCCCTCTTTGAATCTAGAACTTTCATTCTATTTAAAAATTTCTAAAAAAAAAAAAAAAAAAATCATTTTTCTTCTTCTCTTTTTTAGCTGACGACTACTAGGTCCCCTTCCCTCTCCCTGGAACACACCCTCTCTCTCCGACTTTCTTACTACATCCATCTTTTCTGTGGCGGGGCCAAAAAAGGAAACTGGAAGTGCCACTGTGTTGACTTCTTATTCCTTTCCCTAACAGTCTTCAAAAAACAAGCTCATCTAAAAAATACCTTTTTCCTTTCCAAAAAAGAGCACCAGATTCATCACCCCATTATGCAGTGTAAGTTAATGTGTAATTTAATGGGGCAAAGGGGGGAATTTACTCAATTATTCTATCAGAACCTATTACAAACACTGTGTATTTTTCATGTTTACAGCATTAAGTTTTAAAGAAATTATAAACAGGACACATTTTGCATGAAAAGATTATCATTTATGAACTAGTCACACCTAAAATTAGTCTGAAATAGATGAGTTAGTGAATTTGGAACTTATCAATTTAAGTGGGCTTTTCCCCTCAGTAGAGTATCATTTTGGTTGTTGTAGTTTCAAAGTCTTTCTGGAGCAGGGAGATGAGGGGGAAGGGTTGTCATTTCTCCCTCTATGCAGAGAGAACACAAAACAAGAATTAAGACTTTTAAGAAACAACTGTCAGAGCAAATCTGATGGATACCACTGCCTAATATGGAATGTTGGGAATATCAAACACATATTTTTCAAATCTGTGTAATATATATTCAAGCTTATAAAAAGCAAATTTATGTTGTGACTTTCCTGAGCAAATTATATTTTAATGAGAAAACTTTGTATTAATAGTTCATGCAGGACAAAACATAAAGATTTTCAGATCTAAGAGAATTAGATGTAGGGGAAAATGGCACAATCATCAATTTTGAGTTTTTAAAGTGAGTTTGTAAATAATTAGCTATCATGTTCTATTATCAAGTTGTTTTATATTTTAGTTTTCTGGAAAACAATTTATTTTACAATGTAAACCCATAATAAAGTCACTTCTGTATTTAAGAAAAGAGACAAACACTCCTTAATAATATTCACCAATGTACATTTATTTTTTTTATTGAGGAAACCATAATCAATACAAAATTACAGCAATCATGTACCCCTTTACATACAATGGTATTAAAACAAACTAAACCACAGTTTGTAAAGTATTCAATTTACCTCAAGTCCAAGCTGCATCTCCCTAAGACACTGTTCCCATCACAGTAGCCATTTTAAGCCAATCTTCTTTTTACACGGGTAGTTTCTGTAGAGAACACTTTTCTCAGGACGAAAATGCATTGAGCATGCATAAGAAAAAATATATATATGTGCAAATACATTTATGAGTTCCTATAAGGGGTATCACTGAAGAAAATAAAATCCTGGGACTTATTTGCTTTCTTAAAAGCACCAGTTAAAAAAAAATCCCTCAGAAGTTTATACTGTGGCAAGAAAACTCATGACTAAACAAAAAATAAGGTTATTTTCAGAATCAAAATTATCTTTAGGTATTGTTATAATACATTTTAAAGTGAGGCAGAATTTTCAGAAAATAAAAAGACATCTTTATTAACTAGTAATTTCTACAACCTTATTCTAAAGAACATAACTTTGCAGGTAGAAGTGGTTCTCCTGGCAAGAGTATTCAAACAAACATTATCACTTCTGAATATATTCCTATCTTCCTCTTAAGGTATTGTTTACTCCTACACAAACCCACTCCTGTAAATTAACTACTCAGGTATTTGTCTAAGAATATATTTTACAATGCTCATAAACAACTAGTATTAAATCACTAATTTTAGTATTAAAACCATTTTCATTTATTAAAAATAAAAGTATACTTCCCATTTCTAAGAGAAACATCAAACTATAAGAATTCTAATTACCACCACACTATGAAATCTTAAAAACAAAAACATATTGTCAAGTGCTAAATAAATCAATTTCAAGCCAAACATTGTCTCTACCACTCCTAACACCACTGCATTCAAATCAACTGGCTCACCTTTTCTGCTTTCCATTTATTTCAAGGTTAAGATTAGCGCCATTTAAAAAATGCCTGCAGTATCAATGAAGGCTTATGCTAATGAATAAAAAAATTCTCATGAGATAGAAACAATGCCCCAATATCTATTAGCATTCATATGTATTTTCTTTTATAAAAATGCAAACTACAACTAAGCAAAACTTGACAGGCTCTTAAGGTTCAAAGAGCTCCTTTATATTATCAATTTTAACATTGACTATTAAAACACATATACACACACATAAATGTGGTGCAATAACTAACTTTCAAAATTTAACATTTCATGGAACATTTAAGATCAAGTGAATAGCACTTTAAAATGAAAAGTGATCAAAAGCAGGCACAGTACACCCTGTATCATATTACGTATGGGAAAACATTTCATTTTTCTCAGTTACGATTTGCCAATTTTACCTTCTACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAGGACCTGATTTTATGAGCTATGATTTGGTGCTTGCAGCATCTTCAGCACTGTGTGTGAAAATGAAGGCAGTATTTTTGAATATTTTTCTTTGTTGCAAAGATAAGCAGGAGTTTTAAAAGGATCAGCACATTTTAGAAACCGAATAAACAAAACTGATATGATGCTGCTTTAATACATTCATCTTAACTCAAAATATTTACCAGTTAAAATTATCTACAAGAACACACAAACATTTAAAACTGGCAAAAAATAAAATAAATGCAGCGTCAAGTTATTAAGGTATTATAAATCAGAAAAATATTGGTTGCTATACAGATTATGATAGGTTATTTGCTATACAGTTAACATTTCACTGATGCACATGCCTTTTATCAAACATACTGCCAGTATTTCTTTCGGTGTATATAAATAAGAGTTAGGAAAACTGAGTTGTCTTAAGGAAAAAAGGTCATAATAAAACTCTGACCCATAACGCCCTTACTGAATTGCTATAGTTCAAGAACAAGAAAAAAAGTAAAGACTCCATAGCTTTGGAGAGCAAAGAAAATGTCTTGTCAATCATAAACAGACTGTGAAGGCTGTTGAAGTTTCTGACCAAATGATCTCCTAAATCTTGAGAACTATGTAACTTTCCTTTTAAAATTCTAACAATTTTTCTATATTAGGGAAAAGATTGTAAAAAGTTTGGATGTAGTTTAATTACAGCAGCAATCTACTCTTAATTTTCTTGTTTTAATAAAAAGAAAAATCAAAATAAAAACATCACCTAGAAAAGTAAACAGTTGTTTGAACAACTTACAGACTTTCCACTGAAATGGTAGCATAAATAACAAAATACATTTTGGGGAAGCAGTAGCAGATTGCTTTTGAATACACAACCACAAAAACCTCACAGGGACAACATTAATGTACTGAAATATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGTTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCACTGTGAAGTATAAATAATTGCACTGTTTGCAATTAATAAAGATTTTAAACCTTAAATGAATCAAAATCAACAGCCTCCAATTTGTGAGTACTGAATCCAAATGAAAACTATCTCTTCAGTTTAATTAATAAATGCACCACTTTCCTAAAAGGTCATCTATAAAACAGTATCATGCAAAATACTGAAACTGTTCACATCAATACCCTACTCTTAAACAGATAACTCCTTAACTATTAAAACTTCAAACTAGAACTACATATCCATATCTAAATAAGGGCAAGGGAAGAAGTCACTCTCGGTTCTATAAGATAGTCAAAAACATTTCAAAACAGCTACAATGAACTGTACCGCTATTTTCTACCCTATAAATAATCTCAACATTTATGTCCTGTACATCTTCCTTTTATAGTATATTCAGAACAACCAATGGTGCTCCCCTACCAATGAAAGAACTAGTATACATATTTAGGAAATGGTATTAAAACCACTACATTGCTTAATATTTGCAAACTGAAAACCACCCTGTCTGATACATTTCAAGTCTTTCATATTAATATATAAGATATGCATTATTTTACACTGAAAAGCAATATATTTTAGGAGCACCAATGAGTAATACTATTCAACTTTGTTAATGATGAGTTTTCTTTAGCTATAGCTAAAGCATATCAAAAATACTTACCCATTAAGCTCACTTAAAAAAAAATACAGACCTATGAATATTCTATGTTAAATTAAGAAGCAGTTATGGTTTCCAAGATATAAGCACTGTATTCCAACATAATATTCAAACAAAGTATGGCATTTGCATTATGTGGAACATTGACAAAAAGATACTGTTGCAGTTCATCAATTTGTCATTCTGATGTACTTACAGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCCCTACAGAGCTAGTTCTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTATTTGCATGTAGTCTAATATATTAATATGCAAAGAGCCAACAAATATGCAAAGAGTAAAACAATGGATTTCAACAAAATATCAGAACTTCAGCATGAGTGTTATAGAGTAATAAAATGATTCAAGTACATAAAAAAATTAAGTTGATTCAATGATTGGACTTGTGCATTTACAAAACAAAGCTTATCTATACTGCAAAAAGGAAAAAAAAAAAAGAAAAAAATAGCTCAAACATTTTCATACCGCAATAATGTTTCAATGGCAGATGCACTATAGCTATACTTTTTGCATACTATTCACTTTTTCTACCCTACATTTAGAAAGAAACACACTAATATTGCATACCTTGCAAGAGCTCCTTTACATGAAAAAAAAAATACTGTTCTTATTATAGACTACCCATATTTACTATTTGAAAACTGTTTAAAATTAGTTATGCTGAAACAGTCTTGGAAATCAAGTAATTATCAAATTAAAAACAGAAAGGTTAACTGTTATAGCAGCAGTACAGGTCTGAAACAGTGGTCATGTATAAAAGGAAATTTCACTGTTAATGCAATGGAAGTATGCCAAAAGATCATTGTACACACATGCAGTTTTTAATCAAACAGAAGGAAAAAAATGAAGATATCAGGATTACTTGTGCTGAAAACAGCCAAATACAATAAATGGAAAAGATCCTCCAATCTACTACTATACTGCAAGGGGGAAGAAAACATGCCAGTGTTTAAAAACTCAAATTAATATTTCATGGGGAAAGCTTATATATTTGTGTATATGTATCTTAATTTATCATTACTAAGAAATTATGAATTCTTTAAATACCCACATATCCAACTTACCGACACAGGAGGTTTCATATCATTTATTGTAAAGCACAAAACAGGCATTTTAAAAGTGAAAGTATACATTGAAAAAAGTACATTTATATCACAAAG EMBV3_06115 ATTGGTGAAAGGCTCCATTATTTGCGGCCCCCACTGCCCCGGGCCGCGGCTCCTGAGAGC Gene BVV0102_452979 - 1 EMBV3_13121 GK000007.2:98767731-98824637 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214702 TCONS_00214704 TCONS_00214701 TCONS_00214703 1 XLOC_130750 Coding TCONS_00214702 XLOC_130750 Coding Coding LNPEP 7:98783792-98867218 j TSS160525 2592 1 TCONS_00214702_3 806 14 0.969097992208571 0.00460019288523366 0.00158613402235426 0.00137949870056776 0.00260528912125468 0.00248867812275121 0.00174699739591516 0.00276096398694973 0.00321743979582507 0.00325156804688886 6.07369024755191e-21 0.000106832116968618 4.2892846029818e-05 0.000343452244976494 0.000874628466714702 0.00100481657881618 0.000256511708555271 1.27757151186863e-09 2.63276820201138e-08 0.00192320555869772 0.00240982997975401 0.00104590170418976 1.66583978034992e-38 5.51490913899254e-33 6.09794926141814e-80 0.000438235635569067 0.000831387655414093 0.00371265193793412 4.72236180890308e-14 4.03377533420955e-05 6.98359024295445e-15 XM_599899.4 LNPEP PREDICTED: Bos taurus leucyl/cystinyl aminopeptidase (LNPEP), 0.0 4488 100.00 0.959490740740741 NM_005575.2 LNPEP Homo sapiens leucyl/cystinyl aminopeptidase (LNPEP), transcript 0.0 3119 87.27 0.978009259259259 TCONS_00214702_3 sp|Q9UIQ6|LCAP_HUMAN LCAP_HUMAN Leucyl-cystinyl aminopeptidase; 0.0 1437 86.25 0.991315136476427 3 coding 1 0 1 1 0.0884819627557318 0.716145836865562 0.0415086071898079 0.380435538959695 GGCGGATCCCAGAGAGGGCGGAGGGGCGCCGCCCCTCGCGGCACCTCCCCGGCAGCCCTGGGCGCCGCGCCGGGCATGCTCAGTGCGCAGGGCCGCTCGGAGCTCTCGGAGGAGGAAGCTCGCGCGCTCCCGCTCTCAGGAGCCGCGGCCCGGGGCAGTGGGGGCCGCAAATAATGGAGCCTTTCACCAATGATCGGCTTCAGCTCCCCAGGAATATGATTGAAAACAGCATGTTTGAGGAAGAACCAGATGTGGTGGATTTAGCCAAAGAGCCCTGTTTACATCCTCTGGAGCCTGACGAGGTGGAGTACGAGCCCCGGGGCTCACGACTGCTGGTGCGGGGCCTCGGCGAGCATGAGCTGGATGAGGATGAAGAGGACTACGAGTCGTCTGCGAAGCTTCTGGGCATGTCCTTCATGAACAGGAGCTCGGGCCTCCGAAACAGCGCGGCCGGCTACCGGCAGAACTCGGACGGGACTTGCCCGGCGCCCTCTGCCAGGACCATAGGGGTCTGTGTTTGCATCATCCTACTTGCTGTTGCTATAATCCTGGCGATTTACTTCCTGCCCAGGTGTACCTTTACCAAAGAAGGCTGCCATAAAAACAACCGACCCACGGAACCGATTCAGCCCATCGCAACAAATGGAAAGTTGTTTCCGTGGGCCCAAATCAGGCTGCCCACTGCCGTTACGCCAGTGCGCTATGACCTGACCCTCCACCCAAACCTCACCTCGATGACGTTCAGGGGTTCTGTGACGATTTCGCTTCAGGCCCTTCAGGCCACGTGGAACATCATTCTTCACAGCACAGGCCACAACATTTCCAGAGTGACTTTTATGACCGCAGTTTCAAGCCAGGAAAAAGAAGTTGACGTCCTGGAGTACCCACTGCATGAACAAATCGCCATTGTTGCCCCCGAGACCCTGCTTGAAGGGCACAATTATACCTTGAAGATCGAGTATTCGGCAAACATATCTAGTTCTTACTATGGCTTTTATGGCATCTCCTACAGAGACGAAAGTAATGAGAAAAAGTACTTTGCAGCAACTCAGTTTGAACCCTTGGCAGCAAGATCTGCTTTTCCTTGTTTTGATGAACCAGCATTTAAAGCCACATTTGTCATCAGGATCAAAAGAGATGAGCAATACACTGCTTTATCAAATATGCCTAAGAAGTCATCAGTTGTGCTGGAAGACGGACTTGTTCAGGATGAGTTTTTTGAGAGCGTGAAGATGAGCACCTACCTGGTTGCTTTCATCGTGGGCGAGATGAAGAATCTGAGTCAGGATGTAAACGGAACCCTGGTTTCTATATATGCTGTCCCAGAAAAGATTGGTCAAGTTCAGCATGCCTTGGAAACAACTGTGAAGCTTCTTGACTTTTATCAAAGCTACTTTGAAATTCAGTACCCACTAAAGAAATTGGACTTGGTGGCTATTCCTGACTTTGAAGCAGGAGCAATGGAAAACTGGGGTTTGCTCACCTTCCGAGAAGAGACACTTCTGTATGATGCTAATACTTCTTCAGTGGCAGATAGAAAGCTGGTTACTAAAGTCATCGCTCACGAGCTGGCCCATCAGTGGTTTGGTAATCTGGTAACAATGCAGTGGTGGAATGATGTATGGCTAAATGAAGGTTTTGCTACATTCATGGAGTATTTCTCTTTGGAAAAAATATTCGGAGAGCTCTCCAGTTATGAAGATTTCTTAGATGCTCGATTTAAAACCATGAAAAAAGATTCGTTGAATTCATCCCATCCAATATCATCATCATCTGTTGAGTCTTCAGAACAGATTGAAGAAATGTTTGATTCTCTTTCCTATTTTAAGGGAGCTTCCCTACTGTTGATGCTGAAAACTTACCTTAGTGAAGATATATTTCAACATGCCATTATTCTTTACCTGCATAATCATAGCTATACATCCATTCACAGTGATGACCTGTGGGATAGTTTTAACGAGTTCACAAACAAAACACTAGATGTAAAGAAAATGATGAGAACCTGGACCCTGCAGAAAGGATTTCCTTTAGTGACTGTTCAGAGAAAAGGAAAACAAATTCTGGTACAACAGGAAAGATTCTGTTTGAATGTTAAGCCTGAAATTCAGCCTTCAGATGCAAGCTCTCTGTGGCATATTCCACTATCCTACATCACTGATGGAAAAAATTACTCAAAGCATCGATCAGTATCTTTATTGGACAAGAAATCAGGTGTCATCAATCTCACAGAAGAAGTGCAGTGGATCAAGGTCAACACCAACATGACTGGCTATTACATTGTCCATTACGCAGATGACAACTGGGAAGCGCTGATCAAACAGCTGAAAATAAATCCTTATGTGCTGAGCGACAAAGATCGAGCCAACCTCATCAACAACATCTTTGAACTTGCAGGCCTAGGCAAGGTGTCTCTTCAGAGAGCTTTCGATCTGATTGATTATCTTAGAAATGAGACCTACACTGCACCCATCTCTGAAGCCCTGTTCCAGACAGAACTCATCTATAACCTCCTTGACAAACTCGGGCACGTGGATCTGGCCTCAAGACTGGTGCAGCAGATTTCTACCCTCATTAACACAGATGAGGAGACTG EMBV3_00527 GAAGGTGGAGCGGCAGAACTCCTGAACAAGGCAACAGATGCATTGGATGAGAAGTCAAAG Variant GeneID:512570|LZTFL1:NM_001034425:113_cdna 332^397 2 EMBV3_41067 GeneID:512570 22 GENE LZTFL1 MGC128583 leucine zipper transcription factor-like 1 EMBV3_41871 CGCTGGGCTCTAGAGTGGGCTTCAGTGGTTGTGAGACTTTTAAGGAGTGTGGAAAAGAAG Gene BVT0102_340997 - 1 EMBV3_24914 GK000015.2:28422343-28431027 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060838 1 XLOC_036850 NonCoding TCONS_00060838 XLOC_036850 NonCoding NonCoding - 15:28429494-28430881 - TSS45423 708 2 TCONS_00060838_2 55 0.224576271186441 2 0.490620490620491 0.00036512339917963 0.00140507689551856 0.000235271141312123 0.000105561286212307 0 1.51569932703591e-05 0.000560108163506302 0.000735163146751603 0.000178308887221047 0 0 0 8.10533664092795e-06 7.3084654132388e-05 0 0 0 0 0.00216748300618804 3.04721360055135e-05 0.000197236351660713 0 0 0 0.000264221098343827 0.000358243306775963 0.000558605709662275 0 0 0 XM_005215554.1 LOC100848558 PREDICTED: Bos taurus uncharacterized LOC100848558 (LOC100848558), 1e-16 91.5 74.84 0.216101694915254 0 noncoding 0 0 0 0 -0.024062686601279 0.827958296501345 -0.0181139239822388 0.721953093668708 AGGATCATTCACAGTATCGACAGTAACATGTATTAACTAAGCTTTGCCTTGGCTACCCTGGGTTCAATGATCTGCAAGACAAATGCGAAAACCAGGGAGCGAAAAAAGTGAAGTTACTTGTTTGGTGAGAAAGATGGATCACCTGGAGCAAATCCTCACAGCCTTCCTAGGGGAGATGCATCTGGCTCCTGTTAAGCCCAGAATCTAGTCCCAGCACCACTCAGGGCCTGATCCCAGAAGGAGGAACTCAGACCAGTGTTCCTGTGGATACCAAAGCAGATATCCAGAATGTATTCCTCATGTTTAACTTCAAGTCTTTCCTGTGGCAGTGCTGCCTATGCTCCTTATTTTTCTGACTGTAGATGACAGATCATGACTCCCTCTTCTTTTCCACACTCCTTAAAAGTCTCACAACCACTGAAGCCCACTCTAGAGCCCAGCGCTCTGCAACAAGAGAAGTTGCCACAATGAGAAGCCCCTATACACAACTAGAGAATAGCCTCTGCTCACTGAAATTAGAGAAGGCCTGAGCACTGCAGTGAAGACCCAGCACAGTCCAAAAAATAAGTCTCATAGAGAGGCCAAGGGACGGACTGGGAAGAGACTCTGAGAACTCACCAGTTCATCCACCACGGTCCTTGCACAAAACTGGGGTTCAATAAATCATTCATAGATTTGGTCCCTCCATCCAAGAACTCACAATTAATC TCONS_00058659 TCONS_00058659 r 5' 0 TCONS_00058659 TCONS_00058659 r 5' 0 EMBV3_14798 GAATTGGTTACATCATTTGTATTTGTTAGCCTAGTGGACAGGACTTGTGCCTGGTGCGCC Gene BVV0101_015696 + 0 NULL GK000007.2:28617284-28657268 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216289 TCONS_00216291 TCONS_00216293 TCONS_00216292 TCONS_00216290 1 XLOC_131207 Coding TCONS_00216292 XLOC_131207 Coding Coding GRAMD3 7:28656257-28732979 j TSS161354 2522 1 TCONS_00216292_5 422 13 0.967297089453996 6.06780455460255e-05 2.1423977100318e-198 4.15568297081925e-24 3.33659608447601e-06 4.93936780423077e-55 3.49400199199433e-06 2.57547910155813e-08 5.98057686323367e-157 3.49041268166503e-223 2.25871777227508e-14 0.000173970209778416 2.1365425600726e-05 4.39373001579756e-09 3.7362984050484e-08 1.09945287240967e-116 0.00887203119263289 0.00232667117486415 0.00548148692323271 1.71612666683956e-136 3.11079089418837e-43 3.81808351571267e-110 0.00202816543085404 0.00177375546235257 0.00224127681046731 4.08350425900965e-05 3.57645162017192e-11 5.25143035798673e-61 0.000994449441034936 0.00049420576029783 0.00133902211266676 XM_005209090.1 GRAMD3 PREDICTED: Bos taurus GRAM domain containing 3 (GRAMD3), transcript 0.0 2302 99.77 0.507930214115781 NM_023927.2 GRAMD3 Homo sapiens GRAM domain containing 3 (GRAMD3), transcript variant 0.0 1525 87.52 0.482553528945282 TCONS_00216292_5 sp|Q96HH9|GRAM3_HUMAN GRAM3_HUMAN GRAM domain-containing protein 3; 0.0 687 86.87 0.936018957345972 1 coding 1 1 1 1 -0.0227907227381003 0.875698400458903 0.0381930257073307 0.573762094943738 GCGGAGGGCTCGCGGGGCCTGCAACCCGGACGGTGGGAGCCGGGGAAGCGGGGAGGAGGAGACGGTGTGAAGGTGCCCTCCAGACGTGGCCCTGATGACCGAACTACAGCAAGATGTGGACGACACAAAGTCTGCCAAAGTGCTCGGGAAGAGGGAGAGCAAAGTTGGCTCAGCCCACTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAGGTATGCAGGTCGCCAGGAGCGCTGTCTCCCACCCCATCCAGCGAGGCCGAGTCCCAGGACCAGAAGAGAACCATTTCCCTGCGGTCAAAATCCAGTTTCGATGGGGCCCCTGTAGCAAATGAGAAAAGCGACTGTAAAACTGAAAGCAAGAATGACTCTAAGATTGAAAGGAAAAAGTCCTCATCTTCAAGCCAGGACAAAGCAAACATGCACTTCCACAAACTGTTTCTAGATGTCCCCACGGAGGAACCTTTGAGACAAAGTTTTACGTGTGCTCTACAGAAAGAAATATTATACCAAGGGAAGCTCTTTGTATCAGAAAACTGGATTTGTTTTCATTCCAAGGTCTTTGGAAAAGACACTAAGATCTCGATTCCAGCTTTCTCAGTAACCTTGATAAAGAAAACCAAAACTGCCCTCTTGGTGCCAAATGCCCTGATTATAGCGACAGTCACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAACTTACAAGCTACTGAAATCTGTGTGTGGACACTTAGAAAATACAGGTATTGGCAGTGGTCCCAGTCCATCTTCTCTTGAAAACAGTTTCCGGGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGAATTTTCAGATCTGGATGGAGTGGTGCGCCGAAGAAGGCAAGACATGGAAGGATACAGTAGTTCTGGATCTCAGACCCCTGAATCTGAGAACTCTCGAGATTTCCACGTGACAGAATCCCAGACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAACCAACTCGGGCAGATCCCCTTGTGAACAGAGTACCTGAGGGAAAAGCCAAGAGTCTCCCTGGGCATGGTAAAGAACGGATTATGATGCCAGGTCAGTCAGAAACCACTGGAATCATACCCAGAGTAAAGTCTGAGAAATGTCCAACTCTCCACCATATTCTTATATTCTATGCAATTGTTGTCTGTGCACTGATCATCTCGACCTTCTACATGAGATACAGAATTAATACTCTGGAGGAGCAGCTGGGGTCACTAACCTCCATTGTGGACACCCATCAGACTGAATACAAAACAACTTACAAAAGCTGCTTGAGAATGGTGACTGAAGCTCGAGCCACGCAGTACCTCGTACTTCCCTTCAAGTAGGTGCTCCCAGGGTGTTCTGGTGGAGTGCTCCCTGCTGGCCAGAGGAGCTAGCGGGCGGGCAGCCTCGCTTGCCCTTGGAGGTCTCAGACTCAGGAAAGGGGGGAATGGGGAATAATTCTGGTTCCTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGTTTTCAGCGCTGGTGCCTGAAGAAAACACCCGTCTCTGGAGGTCTCAGAAGGGCCCGGCGGACACTTGGATGATTGTGGTTCGGCAGGTTATTGTGACTGTGTCAGCAAACATATTCCACTCCAGCCTTTTCAGTCCTACCCATCAGCCTTTTCTCTCATGTATCCACCCCCGCCTTAGCCAGCCTTCAACGGAAGGGATAAATCATGTGCCAACAAACTCGATACAGTCCCTTAAAGAATTTGCCATGACTTTCCAAAAGGGCAAAAAAAAAAACTCTCATGGACAAACTTGCTTCAAACAAGTAGCATTTGAGTTTTGGGGTTTTTTCCCTTTCTGATGTTATGTTCTGGTTTAAGTTACGTGTGTATCTTAACGTCTCAGCTGCGTATTGGCAAGAAAATCAGGCAAAGCTGATTAAACGATCCCATTTTATGTTTTGTTTTGTTCCTCTCATTAATACTTAGTAGGATTAATTCTCACCCACCCCAAGTCAAGAATCTGTGAGACTTGAGACTAAAGTACTAAATATATACTGACTCTGAAACCAAAACTAATCTTTAAACCAAAAAATATAATAGTGATTTGATACTGGATGGAAGATACTGCATTTTTAAGATTGTAGGTGGACTGTGTTTGTTTTGAAACAGGATGTCTATAATTAATGGTGAAACCCATCAGCATGATGATAACATGCTTTACTCTTTTGCTGACTAAAATATATAACTGGTAGTTTGCTAACTTCTATTTACCATATGGATTGGCTGGTTTTTATTAATAATTATTTAGGTACCCTAAGATTTGTTAATATAAAAGATATTCTGTTTATCTATAATGCATTTTATAATCATTTCTATGAAATGTATTTTGTTTAATCAGATAAGCTAATAAGTGAATTGGTTACATCATTTGTATTTGTTAGCCTAGTGGACAGGACTTGTGCCTGGTGCGCCCCTGGCTTTTAATAAATACTCATTGGTTTAAATACCTTGCTAACAC EMBV3_08561 CCTCTCTGCCTCCCAGAGAAAAGGAGCTTGTGATGATATGTATTATTGCTGATAAAGCCC Gene GeneID:100137763|LOC100137763:XM_002686687:103_cdna UTR3_Alt 1 NULL GeneID:100137763 4 GENE LOC100137763 NULL hypothetical protein LOC100137763 EMBV3_18798 CCTGAGTGGGCCTAGTTCATGTGGTATGTGCATTTCTTCATCCTCTGGGCCGATCCCATA Gene BVV0102_064047 + 0 NULL GK000025.2:35086721-35091301 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145298 TCONS_00145299 1 XLOC_088784 Coding TCONS_00145299 XLOC_088784 NonCoding Coding RASA4 25:35085143-35088847 j TSS108910 3023 1 TCONS_00145299_2 194 0.140258021832617 3 0.184445044558466 0.0015831469490001 0.000402656025197557 0.000264241863796379 2.14193353403358e-05 0.000185844926031245 0.000132408136205386 1.72350384926013e-06 0.000257609692388281 2.56309270780163e-08 4.76368343113299e-06 0 2.05132940380765e-07 2.8474319191222e-06 3.39213979123555e-05 2.34451238115531e-10 4.41083687933305e-09 0 0 5.48973636836615e-05 8.70847854384488e-11 2.30769634128274e-10 0 0 0 0.000269554395533124 0.000787685580596729 9.18695272508962e-05 1.52878690555112e-16 8.10537080317328e-30 1.92533344687891e-10 XM_003584050.2 RASA4 PREDICTED: Bos taurus RAS p21 protein activator 4 (RASA4), mRNA. 1e-126 459 100.00 0.0836916969897453 NM_006989.5 RASA4 Homo sapiens RAS p21 protein activator 4 (RASA4), transcript 3e-45 188 71.25 0.122064174660933 0 noncoding 0 0 0 0 0.0365095343883031 0.734435256746775 0.0112313980387553 0.807825540419163 AGCAGAGGAGTAAGGGACCAGACTGACCCCTTGGGGTCACCTGGGGCAGCTGACGGGGAGGAGCTTGTTAGGCCTCAGCAGAGGGACATCTCTCCCAGAATAGACCCGGGAGACAGTCAAAGGGCTGAGCCCATAGAATTCCTCAATAAGGGGCACAAGGTCTGCACGGAGGCTGCTCACCTTCCCTCTGTGGAGAAGCACCGACAGCTGAGCACGGGCCCAGAGGCAGGCCGCGGGCCGACGGGCCCTGGGGAAGCCCCCAGGGACCCGCTGGCCGAGCTGCTCCAGGTGCTCGGGGACCTCCAGGAGGCCCACAGGTCTAGCCCAGCAGGTTCACCGCCCTCGTAGCTGAGCCGCATCCTGGAGCTGCAGACGTGAGGATGCCCCGCAGGCTGCGCCGCACCCTGCCAAGTGCTGGGAGACCCCCGCGCACTCTCAGCATTTCGCCTCACTCCCTCTTACTGGGGTGCAGGGCCCAGGTCCCTCCTGGGCCGGGGGAGTCAGGGGACAGGGGGCTCCGGAAGTCCAGGGCTGACAAGGCTTTGGCCAGTCATCGCCCACCTGATGTCTCCAGGGAGCTTCAGTTGCTCTCGCTCCTCTGTAAGGCCGGGCTGCTCCCCGCCGCCATCGCTTCCGCTCACCCCAGGCTGCGCCAGGGCCCTCCTCTCCTGCCCAGGGCAGAGCCAGCCAGAAGCCACCCTTTATGGTGGCCCACTCCCAGATGGACTGACACTTCTCGGACCCAGAGAGGCAGGAGGGTGCGCAGAGCCCAGGAGACCAGGCCTGGACCTCAGCACCCCCTTTGCTCCCAGCCGCCACCCCCCCTGCTCCTGGGCTGTGCCCCCCGGGAGAGCATCGAGGTGCTTATTGCCAACAATAAACCTGCCGTGACTGCGGAGGCTCTGGGGTCTCGTGATGGGGGCCAGCTGCTGGCGGGGGTGGCCGAGGACTGGGCGCCAGCATAGACTGTGTACCCCTGTTGCCTCTTCTCTGCTGCCCCCCATCCTGAGGACTTTTTTCTCATCCCACCTACCGTCCCCACCACACCCCTCGGTCCCACTCATCCATCCCACAGGCTGCGAGCCTGACATGCCTCACCAGCTGCCCCTCCTTGCAGCCCCCAAACAGGCCCTTCAACCGGGCCTGCAAGAGGAAGCAGGTCAGAACCTCAAACCACGTGGCCTGGCCCTGCCAGTGTCCCTTATGCCAACCCCCTCATCCCAAGCAGGACTTCCTTGGTCATCACCTCCCTGCCCTCCTCCCAGTCCCTCCCTAGGTACACAGGAACCTTCCACGTAATTAGCAAGACAGAGGAGGAACAGGGTCTTCTAGCACGTTCTTAAAGGTCTCATTCAACCAAGCTTAGAGCCTCCCCTGTGAGCCCAGACCTGGGACAGTTCCCAAGGGCCTGGGTTACAGGCAGGACCCTTGACCCGGCTGACTAGCCAGGCTCTGGGGCAGGACCATCTGGGCAGACTGCAAACTGGGTTCTTTGAGGGGTGGCCCAGAAAGGCAAAGAGGTGGAGAAGGTACAGGGGGCTGCCCCCTCCCCTCAACCCCGTGGCTTTTGGGGCCATATCAGACTTTTCTCCTGGCCACAGCCTTGATGGGTGGTTCCCTCCACAGCTTACACCAGCTCAACCCCCTGGATGTTCATCTCTTCTTGGTCATGATTCTGCCAGCCTGTGGGCCTCACCAGCTTCTTTGCAGGGCTGGGCATCCCCTCTCCTTCCCTGGCCCAGGGCTCAGGGCCAGGGGGCCTCAGCCTGCTCTTCCCTGCCCCCATCACCAACTCGTGCTTCTCTGGCTACTTCCCTAGGGTCTCACACACATCTCCTGCCTGTTGGCTCTTCTTGGGTTTCAAGGACCTCCTGATCAGGCAGTATGGACCCCAGGGTCTGCTGAGCCCCAAGGCATGGAGTGAAGGGGAAAGACAGGTGTGCACTTAAAAGGGGCTTGCACAAATAGAACCATGGGGGTGGGGGGGTGGTTTTGACCACAACCCTTGGCATGTGAGATCTTAGTTCTCTGGCCAGGGATCAAACCCACATCCCCTGCACTGGAAACTCGGAGTCTTAACCACGGAAACTCGGAGTCTTAACCACGGCACCACCAGGGAAGTCCCAGAACTGCAGATTTTAACTGCATACACACACAGCCAGCCACCCACTGGCAACACTGGCCACCCTCTCCTCCAGTGGATCTGATGTGGGCGTGGTCACTGCCACCCTCTCCTCCAATGGATCTGATGTGGGCGTGGTCACTGCCACCCTCTCCTCCAATGAATCTGGTGGGGGAGTAGTCACTGTAGCCACCTCTCCCATGAGTACCCACTGGTCTAGGTTCTCCTCTCAGAATCGGAGCAGAGCTCCCTACAGTGCAGGATGCTACGTTCTTTTTGGAAGCCCCCTGGAAAAAGGAGAGAAGAGACTCTTTCCTTCCCTCAAGTCCAGGCGGTCCTGCAGGTCACCCTCTCACCTGCCCAGGGATTCTGTACCACTCCCTGGGATCGCCAGGCCTGTTATTCACCCGCCCCCCAGATGTCTTGAGAGTCTGATTGGGCCCTCAGACAGAGGCCTGCAGCCCTGGGGCTGGCATTCAGTACAAAGCAGACACCCTGGGAAGCCCTGAGTGGGCCTAGCTCATGTGGTATGTGCATTTCTTCATCCTCTGGGCCGATCCCATAGGAAATCTGGGCAAATTCCCACCGACCTCCTCTTGGGAAACTCCTGTTAAAATATAATTTTCAAATATGTTAAAAAATGACTCAGACAAATATAGCATGAACATGTAACAAAGATTTATTACACTTCAAGGAGGAAACGAGTGTTGAGCAAAGCTGGTTCACAGACTATTTTGAGAAGCTGGGAAATGTTAGAATAAGATGGTGATATTAGATACAAAACTGGTGGATGAAGTTTTGTTCTGTATGGGATGGAAACCTGCAAGTTAATAAGTAACTTCAGTGTCTGGGCTCTAACTGAATAATAAATATCAAAGTCAAACACGGGTTCATTCCCCAA EMBV3_20687 CACACAGGTGCCCACAACTCACAGGATTAGGAAGTCAGGTCACAACTCTTCTGTACCTCT Gene BVT0102_381207 - 1 EMBV3_27162 GK000011.2:21761349-21988494 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03068 CCGGCCATAGAGTATTTTAATGGCGGCCCTCCTGCTGTCGAGAGCACCACGTACTCGGGG Variant GeneID:533865|MED25:NM_001082445:313_cdna 224^529 1 EMBV3_28199 GeneID:533865 18 GENE MED25 MGC148420 mediator complex subunit 25 EMBV3_22462 ACATGTTTGAAAGGAACATCATCGACCTGGTGGGACTCTTTGTGGAGAACGTCCAGAGCC Gene GeneID:527539|LRRC48:NM_001102111:63_cdna Constitutive 0 NULL GeneID:527539 19 GENE LRRC48 MGC165706 leucine rich repeat containing 48 EMBV3_40215 GCACTTAAGAGCCGCTGTCATCAAAGGAGGGAAAAGCCCTTTGTGTCTCTGATCTAATTA Gene GeneID:540325|FAM84B:NM_001105632:50_cdna Constitutive 1 NULL GeneID:540325 14 GENE FAM84B MGC165820 family with sequence similarity 84, member B EMBV3_11569 CTCACTGCGAACACCCCGAGCAAAGACCTCTGGAACTGTATGATGCTGAACGGTAGCAAT Gene GeneID:528560|LOC528560:XM_002698329:83_cdna Constitutive 0 NULL GeneID:528560 26 GENE LOC528560 NULL similar to F-box protein 27 EMBV3_34027 GCTTCAGGAGCCAATTACCGGATGGAGGAACCCTTCTTCGCTTCAACCAAGCCATCCTGG Variant GeneID:510842|LPCAT4:NM_001077901:46_cdna 365^585 1 EMBV3_07246 GeneID:510842 10 GENE LPCAT4 AGPAT7 MGC152090 lysophosphatidylcholine acyltransferase 4 EMBV3_31356 CCTCCGCACGTAGAGAGGACAAAGAATGATGAGCAGTATCTTCCCCCGAGAACACGAACA Gene BVV0102_064274 + 0 NULL GK000002.2:136910385-136988989 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107066 TCONS_00107070 TCONS_00190676 2 XLOC_062979 XLOC_116711 NonCoding TCONS_00107066 XLOC_062979 NonCoding NonCoding LOC786771 2:136711762-136940996 o TSS78688 747 1 TCONS_00107066_3 112 2 0.996750031627209 0.000244858930473881 0.000100887221058775 5.79920357525288e-09 0.00103541292132117 0.00227537395762402 6.3486870205991e-09 5.09088208101086e-09 0.000577617952538637 0.00178693868771328 0.000244630320923372 0.00022436977588454 5.68286505583938e-10 2.12470858708803e-09 0.0073831851735047 0.000788417799782349 0 0 1.67926264766734e-05 0 1.76490746101309e-05 0 0.000671790020845636 6.13965832555635e-06 0.000237944411458437 5.73680352743805e-05 4.8108802688662e-10 1.25485256341994e-11 0.000102545978138693 1.04001592877864e-05 2.50659917351584e-10 XM_005200400.1 LOC101908506 PREDICTED: Bos taurus ubiquitin carboxyl-terminal hydrolase 17-like protein 22-like (LOC101908506), mRNA. 0.0 1326 99.47 0.998661311914324 0 noncoding 0 0 0 0 0.0325370906486804 0.768901115935124 -0.0747392039785758 0.197327309580397 CCGCACTGAGGAACGACCCGAGCCTACCCTAGATTGTGATAGCAAGACAACTGGACTTCCGACTCTGCCCGTCCTGTCTGGCAGTCTCATCCAGCTGGGCCCCGGGCAAACGCCTCTGGACGCGAGGAGATGCGGCCGGCCTCCAAAGTGCCTGGGGCGGTGGGGAAGCTGTCCTCCCCTAGCTGCTTTCGCGACTGCCTCATGGGCCCGTGACCCGCTGGAGGGGCATAGAGGCCCTTATCGACCACCTCTTGCGTTTTTCTTTCTTTGGCTTGGCTGATGGCTTCAAACCCCAAACCCTCCATCAAACGGCAGACCGGGAATTTGCGATGTAACATCTCCGACCTCGAGGGCCAACGCTGGCTCCTGACTGCGCGAGTCGGCGTGGCAAGGAACAGAGAGCGTTCCGATGGCTTGTTTCCCCCGCATGGCTACCTACGCCGCACCATGCCCTCCGCACGTAGAGAGGACAAAGAATGATGAGCAGTATCTTCCCCCGAGAACACGAACAAGCGTGCCCTGCACGAGGAAGCGGAGCCACCCACGGTCCGCCCTCATCATCACCACGCATCTTCCTCCGCCCCATCGTCTCAAATGGACTTACTGCTTGCCCCATCCACACCCTCTGAAGAAGGAGGAGGAGGAGGAAGAGGAGGAGAAGAAGAAGAATGTCGATTGGGGTGGCGTGACAGAGGGAATGGGAAGGTGGCCTTATGCTGGGCGAAATCCGTGCAAAAGAGAGAAAAA TCONS_00107067 s 3' 47497 TCONS_00107067 s 3' 47497 EMBV3_20656 CTGGTGAGCTGGAATTTTCCTCCCAGACGATGAGCCACTTGACTATACAATTCTTCCGCC Gene BVV0102_236823 + 0 NULL GK000007.2:63474544-63496455 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24540 ATGCCTGAGAACTTCCTGAAACTATTAAAAGACACCACCCACAGATTCACTAGCCCTGTG Gene BVV0102_359407 + 0 NULL GK000003.2:113663576-113703381 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42663 GGCTTTGCCATGGGTGTGGCTTACATTCTGAAGCTTTTGGATCAGTACCAGGAATTTGAC Gene GeneID:783379|LOC783379:XM_002687646:819_cdna UTR3_Alt 2 NULL GeneID:783379 5 GENE LOC783379 NULL similar to Uncharacterized protein KIAA1033 EMBV3_20943 GTTTCGCGTTTCCGTGCTCCTGCTCTCATGGTCTGCGCTCTCCCGAAGCTTTGCCGTGAA Gene GeneID:504773|LOC504773:NM_001034220:206_cdna Constitutive 0 NULL GeneID:504773 19 GENE LOC504773 MGC133607 regakine 1 EMBV3_35114 CCCCAGTAGTACAGAGGCCACTTTTAACCTGGAACCAAATAGTCCTATGCACAGTGGCAT Gene GeneID:538833|HAUS6:XM_002689566:25_cdna Constitutive 0 NULL GeneID:538833 8 GENE HAUS6 NULL HAUS augmin-like complex, subunit 6 EMBV3_21740 CTCTCTGAATTAGTGTCTCCATCCGTAAAATGGGACGAACAGCAGCAGGCACAGACTTGC Gene BVT0101_017663 - 0 NULL GK000021.2:69090483-69185854 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25806 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30142 TCGGGACCGAGCCAACAAAAACCTAGTGGACTTCATCGTGAATGCAAAGGGAACAGAGAG Gene GeneID:539380|MUM1L1:XM_002699808:62_cdna Constitutive 0 NULL GeneID:539380 X GENE MUM1L1 NULL melanoma associated antigen (mutated) 1-like 1 EMBV3_38114 GCTGAGATCATCCGGGAGAGTGGGAACCAGGTGTATATGTTCTCACAACCGCCCTGATCC Variant GeneID:507276|DHRS12:NM_001100313:58_cdna 305^479 1 EMBV3_39009 GeneID:507276 12 GENE DHRS12 NULL dehydrogenase/reductase (SDR family) member 12 EMBV3_43007 CCAGCAGCACCCGAGTCCAGGATGGAGGGAGAATTCGCCTGAACCTTCAGAGAGACTAAT Gene GeneID:510669|DBX2:NM_001075461:69_cdna Constitutive 0 NULL GeneID:510669 5 GENE DBX2 MGC139588 developing brain homeobox 2 EMBV3_29257 GCGAGATGGCACGGTGTTACGACTGCAGCAGGCAGATGTTATAGTCACCGATCTTGAGGA Variant GeneID:540184|MGC159550:NM_001110083:109_cdna 120^290 2 EMBV3_10463 GeneID:540184 10 GENE MGC159550 NULL hypothetical LOC540184 EMBV3_20594 GTTGGCTATGAAGCGATTGGTCTGGTGGATAGTAGCTTGCCCACAGTCGGTGTTTTTGCA Gene GeneID:535714|AIFM1:XM_002699521:46_cdna Constitutive 0 NULL GeneID:535714 X GENE AIFM1 NULL apoptosis-inducing factor, mitochondrion-associated, 1 EMBV3_22039 TGGCTGGACAAGATCAAGAAGAGGCTGAATGAGCAGGGCTACTCCCATGTGGAAGGGTTT Gene BVT0102_339218 + 1 EMBV3_40693 GK000002.2:119051471-119135909 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103493 1 XLOC_062129 NonCoding TCONS_00103493 XLOC_062129 NonCoding NonCoding - 2:119089821-119091501 - TSS76838 635 1 TCONS_00103493_3 139 0.37007874015748 3 0.623585467540202 0 1.58243025101913e-05 0 0 7.77508681416371e-06 0 0 0 0 0.00113391668966966 1.08150556028947e-05 3.37859858200736e-05 0 0.000148157508532274 0 0.000166372152726215 0 0 0 0 0 0 0.000158920438781159 0.0011352438126098 2.18219638416477e-05 0 0.000369080219566723 0 5.35153287758915e-05 0.000108883155415938 XM_005197542.1 SP140 PREDICTED: Bos taurus SP140 nuclear body protein (SP140), 0.0 1146 100.00 0.998425196850394 NM_138402.4 SP140L Homo sapiens SP140 nuclear body protein-like (SP140L), mRNA. 2e-97 360 86.18 0.477165354330709 0 noncoding GAGTTCCTCCTCTTGAAGGTCTATTGCCATTCAGAGAGCACCTTTTTTGCGAGGATTCCCTATTATTATTATATGAAAGAGGCTTCTAAAAACCTCAAGGAGCCCATGTGGCTGGACAAGATCAAGAAGAGGCTGAATGAGCAGGGCTACTCCAATGTGGAAGGGTTTGTGTGGGACATGCGTCTCATCTTTCAGAACCACAGGGCATCTTTCAAGTTCAATGATTTTGGCCAAATGGGGCTTAGACTGGAGGCAGAATTTGAGAAGAATTTCAAGGAAGTGTTTGCTCTTCAGGAAACAAATGAATAATGGAATAATGGATGTTGTTGGTGTCCTGGAAATTCCTCTTTTGGCCAAATGTCTCATTCCCCAGCTGCATGAAGGGTTGGCTGCTGATGCCACCCCTCCCCATAGCGCTGCCTTCAGCCAAGTGGAGCCAACTTCACCTGGAGGTGACACGTCCTTGGCCTGGGGGCCGGCCTCCAGTCGACCCAACCTTGATGCTCTGTGCATCCCATGGGATCAGGCTGGAGCCTGTCTGAATATCCATCCTTAGCTTTTGACCCAATACTGTCCTGCTTCCCTCATTCCTTTCTAGCAAAGAAATACAAAATAAATTACTTACGTAAGAGACT TCONS_00106380 r 5' 23270 TCONS_00106380 r 5' 23270 EMBV3_18113 TACTTCTGTGACATCCTCCCCCTCATGATGCTCTCTTGCTCTAGCACCTATGACACTGAG Gene GeneID:617016|LOC617016:XM_002699197:74_cdna Constitutive 0 NULL GeneID:617016 29 GENE LOC617016 NULL similar to olfactory receptor, family 8, subfamily A, member 1 EMBV3_04795 TTGCAGCAGCAGGAGGAGGACCGCAGTAAGACCACACTGCCCACGTTTCAGAGCCCAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02014 GGGAAGAAAAAGAAGAGGCTCCGTGTTGACAAATGGTGGGGAAACAGAAAGGAACTGGCC Gene GeneID:100335676|LOC100335676:XM_002689929:70_cdna Constitutive 0 NULL GeneID:100335676 8 GENE LOC100335676 NULL ribosomal protein L9-like EMBV3_11928 GCCAGGAACTGAGGATAGACTCCAGCCAGCTCCAGCCAACAGTCAAGGAATTGAAGATCT Gene BVT0102_048399 + 0 NULL GK000008.2:58258621-58503718 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227724 TCONS_00227730 TCONS_00227736 TCONS_00227737 TCONS_00227728 TCONS_00227729 TCONS_00227734 TCONS_00227726 TCONS_00227735 TCONS_00227725 TCONS_00227733 TCONS_00227727 TCONS_00227732 TCONS_00227731 1 XLOC_138305 NonCoding TCONS_00227737 XLOC_138305 NonCoding NonCoding - 8:58249809-58263975 - TSS169950 369 2 TCONS_00227737_1 76 0.308943089430894 3 0.974161666078362 2.02454548028606e-07 0.00131780426180382 0.00228196430092542 7.32937123821214e-05 6.34459817313619e-05 1.31211468945775e-05 0.00026433153865227 3.15764480721122e-22 0.000249918923875711 0 1.4687235543772e-119 9.78984024659429e-05 1.13457574771039e-05 0.00135660948425366 1.03742723383151e-41 0.000327644564320084 0 1.6732515653052e-60 0.00067795091630526 0.00153950112368493 0.0007470213840937 4.02203899999034e-05 0.000223518194706889 6.67867769798606e-05 0.00118605625693349 0.00227476623243042 0.000761886292930179 0.000340217308673132 0.000486394024416457 0.000299162286914814 0 noncoding 0 0 0 0 -0.11381348728123 0.680834355976769 -0.0411053989820173 0.399155314865547 TCAGGAATGAGAAGCTTCGAGGCCCGCAGACTGGGATGAAAATGGCTGACGACTCTTCAAACAGGACAAGGGGAAGTGTCCAGAAACCTTGGTCAGAACCTGTCTTTGAGTGAAATCTCAACTTCTGTCTTCCAGAAGCGATGGAAATAGGACTCAGAATTCTGAGACTGTCTTCTGAACCTGATGAAGCACTGGAGAGGCCCACATGGCCAGGAACTGAGGATAGACTCCAGCCAGCTCCAGCCAACAGTCAAGGAATTGAAGATCTCAGTCCAACAGGCTTTGAGGAACTTCATCTTGCCAGCAGTTATAACACAACCTGCAGGACCAAATACACTCTCATCTACTTTCTTTTCACTAAAATTTCTA TCONS_00225453 r 3' 9231 TCONS_00225453 r 3' 9288 EMBV3_08921 CCCTCTCAGACCGCTTCATTCCAACCTAAGGCCTCTCGCCTCATTGTCACCTTCGACGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03467 CAAGAGCCTGTGCTTGCTGAAATCATTCCTATTCTGTGCATCTCAGCTGTCTGGAGCCAG Gene BVT0102_080541 + 0 NULL GK000001.2:141374947-141459731 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002388 TCONS_00002389 TCONS_00002385 TCONS_00002387 TCONS_00002386 1 XLOC_000585 Coding TCONS_00002386 XLOC_000585 Coding Coding IGSF5 1:141349889-141403929 = TSS1208 3375 1 TCONS_00002386_3 370 0.259851851851852 9 0.937711652695276 0 0 0 0 0 8.31669345101334e-14 0 0 0 4.91376284908661e-10 9.46283488163938e-14 6.85291053729548e-16 6.28050068211437e-11 5.95224156722417e-09 3.03806562509755e-09 0.000918298489651957 0.000282664737348558 0.000200422366844465 6.14836401594812e-13 7.04285188126989e-14 0 0.000312766769998395 8.98354021951477e-09 0.00059346814033585 0 0 0 0.000121592775348568 6.09989987337907e-09 0.000184239773910755 NM_001206778.1 IGSF5 Bos taurus immunoglobulin superfamily, member 5 (IGSF5), transcript 0.0 6087 100.00 0.999703703703704 NM_001177887.1 Igsf5 Mus musculus immunoglobulin superfamily, member 5 (Igsf5), 0.0 753 74.79 0.343111111111111 TCONS_00002386_3 sp|Q7TSN7|IGSF5_MOUSE IGSF5_MOUSE Immunoglobulin superfamily member 5; 3e-152 439 63.88 0.997297297297297 3 coding 0 0 0 0 -0.246164257046505 0.34288776672075 -0.00544615899104724 0.907277716974298 TCGGCCTGTGACGTGAGCCACTTCCTGGTAACAGCTGAGCACCGTCCAGATTCTCTAGTGGCCGACAGATTTGCTCCTGCGTTTGTGTGGGGAGAGCTCGGAGGCAGGAAAGAGGGGACCGAGAACCTTCGCTGAAGGCCTGAGGGCCAGATCCACCTGCCACAGGTGAGGAGGAACATGTGAGATGGAGGGAGCTGCCGAGAGAGGCGTCCTGGCCGTGCTGGTGGTCCTGGCCGTGCTGGCAGCCTGTGGATCCAGCAGTGAAATCATAGAGGGTCCCAAGAATGTCACAGCCCTGAAGGGCTCGGAGGCTCGCTTCAACTGCACCATCTCCCAGGGCTGGAAGCTCGTCATGTGGGCTCTGAGAGGCACAGTGGTGCTGAGCATGACACCTAATGAGACCATCATCACCAGTGACCGCTTCACTTCGGCAAGCTACCAAGAGGGCGGGAACTTCATCTCTGAGATGATAATTCATGACGTGCAACTCAGCGATGCCGGGCAAGTCAAATGCAGCCTTCAGAACAGCAATCGGGATGGAGCCGCCTTCCTTTCTGTTCAAGTCATGGGGCAGTTGCTCATTCCTGGAGGCAGCCTTGTAGTCATTGAGGATAAGCCTTGTAATGTGACTTGCCGTGCACTGAACTGGACCCTGCTCCCAGATCTTTCCTGGGAGATAGGGGTTCCCGTGAGCCATTCGAGCTATTATTCCATCCCGGAGCCTGAGGACCTTCAAAGTGCAGTGAGCGTCCTTGCTCTGACACCACAGGGCAATGGCACTGTGACTTGTGTGGCTGAGATGAAGGGGCTGGACGTCCGTGAGTCTGTAACTGTCAATCTCACTGTGGTTCAGCCTCCCTTGGACAGTATTGATAAACCAGGTACATCATTGCCTACCTGGGCCATAGTTCTACTTGCTGTGTCATTGTCATTGCTTTTGATCCTGATCATTGTTCTGATTATAATATTCTGCTGCTGTGTCTCCAGGACAGAGAAAGAAGAATCCAGTTATCAGAGTCAAATAAGGAAATCTGCAACTGTGAAGACAAGCAAAGACACTGCTGGGACAAAGTTGAAGAGTGCAAATGAAAACTATGGCTACCATTCAGATGAGTCAAGGACCACACAGCCGGCTTCCCTCCATGCCAAGTCCTCTGAAGCCGGTGTTCCAGAGCAATGCAGCAGTAGGCAACCTCATCAGGAGTCTGATCACCGCCAGCTGGGCCCAGCAAATCACCCACAGGTTTCCTTTTATGTGGCCAGTCCTAAGAAGGTCAGGAATGTGACTTTGGTATAGTACAGACATCCCTTTGGCTTCACATGGCTCTGACTGAGGACCTACATCTCATTGCTCATGACGTCATCATTGCTTACTGTGATGTCATCACTGCTGTCATTCTAATGCTGGGCTCCCACTTTGCAGCATGACCTGGAAGAAGCAATGTTGTCATCATCAGAATGGATATTTTATTTTGAGAGAAGGAATCCATTTTCCCAGCTTCTAAAGTGGAATTTGGCTTTTAAAATATTTCAAGATTTCAGCAAATTCCATAGTTACTCAGTAAAAGTTGCACATTCATTATGATAATGCTTCTCATCACTCAACACTCCTGCTTGCTAACCCAGCATATGGCAGATATGTCTACATCCCATTGTGACGTTGAAGACATCTTTATTATCTACAGTCTCTTGAAGATAATATTTATGTATGTTTACTATATGGTTATTATTGCATATTATCTGTGGAAAAAAAGAGGATTAAACATTAGGATCCATTAGATGAGTGAAATTGCCCAGAAAAATCCTAAGTTGTAGGTTATAAATAATATTACATTCTAAAGCAGAAGTGCACCTTGAGAAATATCTTATTATTGGATATTGACATGAAGACATTCATTTTTATCTGCTCCCTTATCAATCTTTTTCTCACGTCCTCAGATGAGTTAGATGTGGATTTTGCTGTTTGGGGGATGTATCTCCAGCTATGAAAAAACTGGATATGGGCAATACATTCTTTCATAAATAAAAGGGAAGACACCAAAAAACCTTTTATTGTTCTTCTTAACTCTTTACTGTTTAAATGGTTTAAATAATCATAGAGTTTAAGAATCAAGCATTTTCCAAGAAACAAAACAGGAGACCTCTATTAAAAATTCTTTTTTCATTTTTCATGTAGAGATTCTCATTGTATTTTGCTGACAACCCCATCTCTTCATATTTAACGTAGAGGTTGGACTATGATTTGACTGAGCTCTTCGCTGGTTGATGCAGATTACTATGATGGCTAGCAATTAGTAACTGCCCTGCGCCCCCCAGACCGAACCATGCTATTGTCAAGATAGAATTTGACTTTTCAGAAGTGTTAGGATTTTAGTAAATTCCTTAGAGTTACCTGGTAAAAGACACAAATACATTGTGATGATGATGTTTTTTATCATACACTCCTGTGTGCTAATCCATTCACAAAGAAGTCTGTACAGGCAGACCTCAGAAATGTTGTAGGTTTGGTTCCAGACCACAGCAGTAGAGCAAGTCACACAATTTTTTTTTTTTTTGATTCCCAGAGCATGTGAAAGTTATATTTACATATACTGTAGTCTATTAAATGTGCCTTTGTGTTATGTCTAAAAGAACAATGCACACATCTTAATTAAAAAAATATTTTCTTGCTAAAAAATGCTTGCCACCATCTGAGTGGTCAGTGAGTTGCAAACTTTCTGTAAGAGTCACATCAGAAATCACTGATCACAGGTTATCGATTGAAAAAAACTGCCCAACCTAAAAACTGAGAATTTTTTTATTTGGAAAATTTTCTAAAGACATCAAGCCTGGAAGGCAGACTCCTAGTGAGCTCCGAGGGATTACTCCCAAGAAGTAAGGGAGGAGACAGGATATGTAAGAGTTTTTGCAACAATGACCAGATAGTCATCAAAAGATGACTGTTAATTAAAGAAAACCAGACATCTCAAGTTAAGCAATTCAGTGTTTTTCTATATATGGGGAGATACAAGAGCCTGTGCTTGCTGAAATCATTCCTATTCTGTGCATCTCAGCTGTCTGGAGCCAGGATCTTGTTCTTTCCTATCCTGAGTCCCCTCAGGGCTCACCTTCGGGGCCGACTGCAGTGGCTGTTGGCTTGATGGCCACAGCATCCTTTGTTTGCTGATACGGCAGGCAACGTTTTGCATCCACAACCGCAGCAAGTATAATGAAAGTTTGAAATACTGTGAGAATTTCCAGACTGTGACACAGAGACAGGAAGTGAGCAAAGGCTGCTGGAAAAATGGCACTGATAGACTTCTGCTGGGTGTCACAAACCTTCAGTTTGTAAATGCAATATCTATGAAGCACAATAAAGCAAAGCATAATAAAATG EMBV3_17120 GAGAGATGCCTTCAGGGACCTTGCTAATCTCACTGCCTTCAGAGTCCTGTGTGTAATCTG Gene BVV0102_158859 + 0 NULL GK000008.2:1712468-1792851 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224221 TCONS_00224222 TCONS_00224225 TCONS_00224223 1 XLOC_137478 NonCoding TCONS_00224225 XLOC_137478 NonCoding NonCoding LOC100848912 8:1745088-1761884 j TSS168194 661 3 0.960821673116999 0.000444283011928569 0.00104926470156991 0.000647174106097414 0.000582010346311493 0.000163774636439749 0.000604785696780855 0.000735646445992273 0.000116325814921376 0.000456926278104023 0.0013300326903944 0.000762702109566753 0.00110894890456363 0.000143314770887235 8.11137363272245e-06 0.000219527822587326 0.000631990188284784 2.75474552323776e-05 6.18492668061151e-30 0.00328450865501595 0.000514345227059256 0.000307297140720238 0.000438720247140543 9.91313820724296e-05 0.000467625605098835 0.00123128069683742 0.00175257006542288 5.05313133247289e-05 0.000252424388310961 0.000257051712685918 9.3829174526268e-06 XM_003582502.2 LOC100848912 PREDICTED: Bos taurus uncharacterized LOC100848912 (LOC100848912), 0.0 901 100.00 0.753403933434191 0 noncoding 1 0 1 1 -0.852759794267736 0.00183985393745715 -0.049581516710891 0.493799456688992 TTTTAACATTACTTTCATGACCTCAGGAACTTTCGGCTGGTTTTTTCTTTCAAGAAGCCTGAACCCTTCATTCCCGTCTCCAGGACAGGTCTTCCTTTGAGACCCCACACTCTCCAGGGCCCTGCAGGACTGCGCTCGGCCACCTTGGACGAACTTGAGGTGGGCGTGGGAACTTCTTGGGTCACGGTTACGGAGGAGAGGACGGAAATGGAGAGCTTCCAGCGAGGAGAGTCTGCAGGCTGGAGAGGCATCAACTAAAGACCCCAGAGAGATGCCTTCAGGGACCTTGCTAATCTCACTGCCTTCAGAGTCCTGTGTGTAATCTGCTAAGGAATCTGGGGGATCACAACCAGTGCGAGATTCATCCTGAAACAACCAGATGGTCTAAACGCCAGGGATGCCACTTCAGTTTATGCTCCAGGACCAGGGACCGTGATGGCTTATGTTATAGCGAGTTGCCTGCTGACAGTGCCGTGAGGGTACCACGTGCAGGAAGCGTCCCTGGGGCCACTGCGCTGAAGGCGCCCCCATGCCGAGTAAGAACTGCACATGGAGGCTGTGCATTCCAGGAGCTCTGTGACTTGGTTGTCTTCTCATTAAAGTACATTTAATCTTGAATAAGTACATTTCGTTTTTGTCAATTAAATTTCATTTTTATTAG EMBV3_21049 AGTTGACTGGTCGAAGCCATGCAGGAGGAGACTACACAAAGATGTGACTATGCGGGAGCA Gene BVV0102_193609 - 1 EMBV3_31982 GK000006.2:61807729-61872552 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02349 TGTGCCTGCTCAGTTGTGTCCAACTCCTTGCAACCCTATGTACTGTAGCTCAGTAGGCTG Gene BVV0101_068476 - 1 EMBV3_15835 GK000005.2:29898283-29905580 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27161 TCTTTGAGTCCTTTGGGGACTTGTCCTCTGCCGATGCCATTTTGGGAAACCCTAAGGTGA Gene GeneID:511735|HBG:NM_001014902:344_cdna Constitutive 0 NULL GeneID:511735 15 GENE HBG NULL hemoglobin, gamma EMBV3_38864 CCCAAGATCAGGGCCAAAAATCTGGGGAAATGCTTGCGATGGGTATGTGCCGTCCTATAA Gene BVV0102_201556 + 1 EMBV3_28430 GK000010.2:2193666-2361695 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32656 GCTTTCAGGAGCTCTTAGATACAGCCCTCTCGGCAACCAGAAATTGTTTAGGGAAGCTCC Gene BVV0102_232865 + 0 NULL GK000007.2:110864229-111045742 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214879 TCONS_00214887 TCONS_00214882 TCONS_00214894 TCONS_00214891 TCONS_00214880 TCONS_00214886 TCONS_00214883 TCONS_00214892 TCONS_00214893 TCONS_00214884 1 XLOC_130788 Coding TCONS_00214893 XLOC_130788 Coding Coding FER 7:110692046-110868168 j TSS160620 4989 1 TCONS_00214893_1 278 8 0.971718307300095 0.0306165218924267 0.0279562112834744 0.0263851934828651 0.0144556677645795 0.0235298291313521 0.00948708011196222 0.0143697824483062 0.0153894998080103 0.0237403555189299 0.0048273424667629 0.000331288160145466 0.00171247469011471 0.00328909256462332 0.0122693157201978 0.0139985215819507 2.94230844585449e-35 4.85944884965285e-24 3.8559519022022e-30 0.0288951087764384 0.0335823228930417 0.00928692148473363 1.5409962573544e-34 0.000491601224120135 1.88465530820173e-43 0.0384786076382202 0.0331012914688569 0.0189245678840489 3.32415163680461e-06 3.50667879290819e-24 0.000336044504892592 XM_005209780.1 FER PREDICTED: Bos taurus fer (fps/fes related) tyrosine kinase (FER), 0.0 8264 100.00 0.918220084185208 NM_005246.2 FER Homo sapiens fer (fps/fes related) tyrosine kinase (FER), mRNA. 0.0 1122 87.61 0.178192022449389 TCONS_00214893_1 sp|P16591|FER_HUMAN FER_HUMAN Tyrosine-protein kinase Fer; 0.0 547 92.28 0.974820143884892 2 coding 0 0 0 0 -0.0375367019895588 0.732077223283783 -0.0565802254795511 0.308329998058279 GTGACCGACAGGTGCCTGTTGACAGCACACGCAGGAGCAGCTTGGATGCTCAGAAGGGGGTGTCCACAGGATAAGAAGTGGATTCTCAATCACGAAGATGTCACATTAGGAGAATTACTGGGCAAGGGAAATTTTGGTGAAGTATTTAAGGGCGTATTAAAGGATAAAACTGCTGTTGCTGTTAAAACGTGTAAAGAAGATCTTCCTCAGGAACTGAAAATAAAATTCTTACAAGAAGCCAAAATTCTCAAGCAGTATGATCACCCCAATATTGTCAAACTTATAGGAGTCTGCACACAGAGACAGCCTATCTACATCATTATGGAACTGGTTCCAGGAGGTGATTTCCTCACGTTTCTGAGAAAGAGGAAGGACGATATAAAACTCAAACAATTAGTGAAATTTTCATTAGATGTTGCTTCTGGTATGGCCTATCTCGAGAGTAAAAACTGTATACACAGGGATCTTGCTGCAAGAAACTGCCTGGTAGGTGAGAATAACGTGCTGAAAATCAGTGACTTTGGAATGTCTCGTCAAGAGGACGGTGGTGTGTATTCATCTTCTGGCCTGAAGCAGATCCCCATTAAGTGGACGGCACCAGAAGCGCTTAATTATGGGAGATACAGTTCTGAGAGTGACGTGTGGAGCTTCGGCATCCTGCTCTGGGAGACCTTCAGCCTGGGGGTCTGCCCCTATCCCGGAATGACAAACCAGCAGGCCCGGGAACAGGTGGAAAGAGGATACCGGATGTCAGCCCCTCAGCACTGTCCAGAGGAAATATTTAAAATCATGATGAAGTGTTGGGATTATAAACCTGAAAACCGCCCCAAGTTCAGTGAACTTCAGAAAGAGCTCGCGGTCATCAAGAAGAAGATCACGTAGTGACGGAGCAGCGTGGACGCGGCCTCTCCTCCCGCAGAGTAATACTGTTCTCCTTGTTAACCATGAGTGTATACCGTGTTGTGTGCAACCGTCTTCTAAGGTTACTTTTTTTATTAACTGTTTTTTTAAATATGTACTGTTTAAGGAAAAAAAAAAAAAAAAAAGGCAAAGGCATTGAAGCGCAGTCCTTGCATGGGCGCTCCTAGCTCAGCCCCGCGGGAGTGGACAGGCTCGGGCTCCAGCGTGCCGGAGCCCGCCCGTCCTGCCCTCACCGGGCGCTACGGTGCTCCGCAGGGCCGCTTTCCTCCAGGCCCGGCTCCCCGCTGCCGCCCCGGCTGCGGACCCCGCTCCGTCCGTGCGTGCGCCACCCGGCAGGCCGTGTCCGCGAGGCACGTCCCGACCAAAGTCAGCTTTCTGCGCCGCCAGGGCAGGAGCATGATGGTAAATATCACTTCACACAGAACTGTTCAGACCTCCCCGGGGTCTTCTCTCCTTTCTCGCCAGAAATAAGCATAAGAACCCTCCCGTTTCTTCCTCCGAGTAAGGCTGTGGTTTCCCTCCTGTTTTGTCGGGGATGGTGGCTGGAGTCCCCTCACAGAGCTGGCAGTTGAGGCCGCGGCTTTTAGAGGCCGTTTTGGACGGCTGTGACCTGTGGCAGAGTCGTGCCTCCACACACACACAGACACTCACACACACACACAGACATGCACACGTTATGATCTGAATTCATGAGCAAGGTTCTGAGAAATGCTTTCAGGAGCTCTTAGATACAGCCCTCTCGGCAACCAGAAATTGTTTAGGGAAGCTCCAAAGCACAAGTCCACAAAAGTCACAGCGCCTTTGAAGCGCCTTGATTTGAGAGGAGACATCTCGGAATGCAGTTCCTTTCATCCACGCCACTTTCCAGGGCTGTCCGAACTGAATGGTCCTAGTTCATAAACACATTCCTATGTGTGCACCCGTGGGCACGTGTGCACACTCACCCCCCCAACACACACACAGATGATACCAGGAAGTCAGGCAGGTGTGAATTTGGAGCGAACAGCTCTGAAGTCCAATGAGCATTATCAAGGAGGACGCTGTAGAGGCGGCCCTGCTTTGTCCGCTCTCTGTTCATTTACTCTCACACGGCTACCTGGGAACTCTTACCGTTAGCTGACAGCTGTGAGCGCGGTGGAGATGCGTCACGGGGAAACGCTGCCGAGTTCAAACTAGGATTCTCTTCAGCTGACTCTTAGCCGCATCCAGGGAACTTACCCCATCCCATGTTCTGTATATAGTTGCCTCAGGAAACACGTGTGTGTGAGAGACAGTCACGCTCAGGGGTAAATGTGCCTGGGAGCTTTTAGTGCGTGCTCCAGCCTGTGTCCAGATGCACAGCAGTAATCATTTGGTCTGCGTTCAGTGCAGGCGCTTATGGGATGGAAATGCCTCCTGCCCCATCCACCCGCTTGCTGCCTGGGAATATCACTGCACACGGAATAATGGTGAAGAGAAAAGGGGCTGTGTGTGCGAGTTTCATACATGTTTCATGATTACCACATCCGGACTAAAATGAAAGCATAATAAACTTGCCCTCAAAAATAATGCAGTATACTAGGCAACTTCTTTTAAAAGCAGCTTTGTTTCCCTTCTGTCAAATATGACGAGTAAGTGAAACCTTCTTTTGATGGCATAAACTGCGGTAGATCACAGCACAGACTCAAGATTAAGAGCTCTGCTCTACACTCACTTGCCAGCTTTCAAAAGCAAGAATAAAATAGGGACCTTTCTGCCCTTTGCCAATGCTTCCAAGTGCACTTCTGTAGCATTCTTTATTAAAACAAAACAAAACAGCCTCCCATCACTTAGCAGCCCCAAAGCTTAGCTCTCAGCAAAGAGAATGAAGGTTTGGGCTTTAATTTTGTGAACAAGACCTGAAGCTTAATCTTTGCATTCTGGTGGAAAGAACGAACACGGCTTTGATATTTCACTCATCCAGGCCGTTAGAATTTACAATTCACGTCATAACTCTATGCTTAAATTAAAGAAGCTTTTCCTAACATAATGACATCTGCAGCATTTAAATTCTATCTTATTCTGTGTCCCAAAGCAGGCTGTGGTGTAGTTCAGGATTAATAACTTCTTTCAGGGTCATATCAGTTGTATAGACTATTCAGTTTAATATAGGCACATGCATTAAGAAAAACTTATGCAAACCATTTTTTTTTACCATTAATTTTGTTGTGCTTGAAGCATAATTTATTCATCCCTTCTGTCACTGATAATTATTGGAATTATGTACTTTAGGAGGCTAATCCATACCCAGAAAGCTCACATGCAAATACTCCTCTGAATTTGCAAGTTGATGTAGGGAAAGAAGCTTCAGAAACATACAAAATAGATTTGTTTAGTAAGAAAACAGTGGTAACCAAAACTGCCACTGGTCTGAATGTAATCCAGCCAGGTCACAAATCTTTGTGTTGTGAATGGGTTTTTAAAGTGTGGCATCTCTTCTCCTGTTCCGTTTCTGTCGTCATTCCTTAAATTTATGACTACAGAGTAGGGGGCAGGTGAGCCCGGGCAGCTGGATCCTCCCCTGCATTTTTCTGTCTTGAGTCACCAAGGAACCTGTATGAGAAATAGACAGGTAGGTCATCATTTTTCAAGGAAAGAAACCTTTTATTGTCGGGTAGGCATTTATTATCAACACAAGAAACCTAAACTTATTTTGTGTTCCACGTAACCTAAGGTTACTTCCCAAAGCCGATATTCTCTTTCTCTTCTAGGAAATAATAATAAAGGGTGTGAATAGGCTTAGTTTAGATGCTCAAACCGGAGGTTTCATTTCAGTCCATTCTGTCACTGGGTCTCCAGTGACAGGTCTCATGTAAACATTTCTCTTTTATCTCCCAAATTTAATAGTCAATATAGTTCTTCATCCATAATCCACCATTCTATCACAAATACTCTACTATTGAAGCCTCTCACTAGCATTATCAGTGTAGAACATGAGTCTGATTGTTTCAGCCAGTTTTCATATTTCACAACTTTTTTCATTTGAGGGTCGTTTTTCAAAGAAAAGGAAGTGTTTGGTCATTGAAACAGTCTTCATTTCCTTTAAACCACAGTACGGTTTTCTTGCGTATCTGTAACTCGTGTTTCAGTCGTGCCATATGGTCTCACATAAAGCTTGGCCGATACCACCAACATAGCTATAGCTTCACAACTCCGGTGTGACGCGTGTCACGAAGGAAGTGTTTTAGTTACATGCCGCACACTGAGGACCTTACAGTGGGGTAAACAGAAACGGCAGCGCAGAAGGTCCCGTCGAGGCCGTCCTTCAGTCTCCTCGGTCACACCGCCCCCTAGTTTATTCCCGTGAGTCGGGGCGGCCTGAGAGCCTTCCTGAGTGTGCCCTTAACTTAAGGTTAAGTTATTTGCCTTAACCTTCCTTTTACATATGCGTACTCCCCCATCACAAGATTGGTATTTTAGATGTTTCTTATCAACAGAATTGACTGTCTGTAAACACTGTTCTGAGTCACATGGAGACTAATTTTTGTATTTAGAAGGTCACAGCCCTCACTCAAACAGAATAAATGTAAAATACAAAAGACAACAAAGGGGCAGATAACTGCAAAAGACACGGTTTCTTTATGTGTTCATATGTTAATTAAAGGAAAAAGATTTTATATGAAAATGAGTTTATATTACACTTCCATTATACTATTAAGTTAGCATGAAAGTTTACCATTAAAATAAAGTGTTACCTCTTTTATTACTAACTCTGATTTGCTTATAAATACCAGAAAAATTTTTATTAAATATTTTAGTTTTATTTATTTTCTCTCTTTTGAGTTTCATATCAAGTCTGAATACTGTATTATTTGGGAGGATCCAAAACCACATCTTAATTTCTGCCAAAGAAAATACACTGATTTAAAAGTCAGGATTTCACGTACCATGATTACCTACTTGAAGGAGATACTGGTACAGTTGCAGAGTCCCATAAAATTCTCCTTTAGAAGGTGATGCTATAATACAGAAGGTGTGTAAACTATATGTCTCAGTCATAATTCGATTTAAGGAAATATTTATTACCCCTTTGAAACCATCCTACTGCCT EMBV3_22318 AGCACCTTCCTGAAGGACGTTCCGGGGCAGTTCCTGCTCCGGGTCTTCTCCACCGGGAGA Gene GeneID:789674|CAPN10:XM_002686618:138_cdna Constitutive 0 NULL GeneID:789674 3 GENE CAPN10 NULL calpain 10 EMBV3_43780 TGCCAGCATCTTCTCCCAAAAACTCTTGACTCACATTGGAATCGGTGTAGTACTCAGGGC Gene GeneID:789144|LOC789144:XM_002693341:246_cdna Constitutive 0 NULL GeneID:789144 15 GENE LOC789144 NULL similar to olfactory receptor, family 52, subfamily A, member 5 EMBV3_12861 AGTGGAATCCGCTGCAAAATCTCCAGCCTTAATTCTTGCTTCAGGACCGAGACCAGGGTC Gene GeneID:532641|ZFAND3:NM_001102145:47_cdna UTR3_Alt 3 NULL GeneID:532641 23 GENE ZFAND3 MGC155251 zinc finger, AN1-type domain 3 EMBV3_12243 CACAGTGGGGTCAAACCTGGAGATCCTCCTGCCCACCCTCTTGGAAATTGAGAGTATGAA Gene GeneID:100336228|LOC100336228:XM_002695409:33_cdna Constitutive 0 NULL GeneID:100336228 18 GENE LOC100336228 NULL hypothetical protein LOC100336228 EMBV3_07458 TCCCTCAGCCTGCTGAGCAGGCTTCCCCAGGCTTCGGTTGCAGGCCAGGATTCAGATCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21039 TCTGAAGATCACATTAGTAAAAAGACTGAGGAAGTAGTTCTAAAAGATGGAAGAATTGAA Variant GeneID:613960|GKAP1:NM_001040573:58_cdna 747^896 1 EMBV3_17813 GeneID:613960 8 GENE GKAP1 MGC134141 G kinase anchoring protein 1 EMBV3_29190 GGCTCCATTGCTCGGATGTGTGCGCTGAATGAGAATATTGATAGAGTTGTGTTCGTTGGG Gene GeneID:535887|PANK1:XM_002698345:54_cdna UTR3_Alt 3 NULL GeneID:535887 26 GENE PANK1 NULL pantothenate kinase 1 EMBV3_24482 CCCCTGCTGCTCTCTTTGCACTTTATTTGCAGTCTGGTTTTCAGGCAGTGGAGCTTACAC Gene BVV0102_173197 - 0 NULL GK000030.2:18992894-19025879 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249534 TCONS_00243894 2 XLOC_152477 XLOC_150294 NonCoding TCONS_00243894 XLOC_150294 NonCoding NonCoding LOC618452 X:18985810-19044458 o TSS183406 1092 1 TCONS_00243894_4 89 2 0.981414224086483 0.00111120212008868 0.00183349188377616 0.00148504147413495 0.00102338959081051 0.0022596283393719 0.000254329233520141 0.00180630535340275 0.00356059916909324 0.00262604239372608 0.000673003767414898 0.00020606355108568 0.000597819064837129 0.000344741053065305 0.00122107175194858 0.000299512764573571 0.00153703738208104 0.000252138625705757 0.000142111051371494 0.000906776745776056 0.000925729689176784 0.000284297699471938 0.000789371926300416 0.00162163469603449 0.000102291372220004 0.000556061955213624 0.00103380931734256 0.000413698647074777 0.000214788269934339 0.000332388687163842 0.000571677898846893 XM_003585604.2 LOC615899 PREDICTED: Bos taurus mCG115122-like (LOC615899), transcript 0.0 1844 97.61 0.995421245421245 NR_024493.1 LINC00087 Homo sapiens long intergenic non-protein coding RNA 87 (LINC00087), 2e-23 114 82.20 0.106227106227106 0 noncoding GCTGTGACAACACTGGAAACAAGAACATTTCTCTGACCATACTGCGCTGACTGGTGCAGAGTTCATCACACACAGAAAAGGAGCAGTGGTCTTATTCAGGTCAGTGATTGTGTGTAAGCTACACTGCCTGAAAACCAAACTGCAAATAAAGTGCAAAGAGAGCAGCAGGGGCCCAGTCGGGAGATGAGGAAGAGACGGGAGAGCAGAAGCAGTGAACGACTCAAGATCAAAACGGTAAGAAGAGCAGTGGCAGGAGCACATGCTGAGGACGTGTCCCCGCCCCTCCCACGGCCAACATCTTTGGGGGCGGACAGCCCCAGCCAGAGCCCCACAAGGAGTGGGGATTCTCTGCAGGTGACGAGGGGTCTCTGAGCCCGGGGCCCCTGAATCTCCAACATACTTTATCCACTTTGGGAAACAGCCTCCCAGGGCCCAGGCAGCTCCAACAGAGCCACGAGCCCGGGAAGGACAGGGAGCCCGTCCTGCACTGCACACCAGCTAAACAGCTCTGCACCCTCTGCAGCGCATAGTCACTTGTGTGTGCACAAGCAATCACACACTTGTGCACAGACACACACCCATTCACAAATGCACACTGACACGTGTATTCACACACACACACACTCACATCCGCACATTCACACACAAACATCTGTGCATTCATGCATCTGTACTCATACCCACACACTCATCCACACACCCCCTCACACACTCACACACTCAAGCCCTCATGCATGTGCATACATACTCGCACATACATGCCCACACACATCCCACACTCACACATGCACTCAACATGCACACTCACACACACATTCACACACAGGCACGCACATATTAAGTAAAGACCCTCCCTAGTGCCCTCCCCAGGTCCTCTCAGGCTGGCCCAGGAAGAGGCTGCGGCTGGGGATCCAGTCACCCAGAGCGTGAGACCCGAACTTGAAAAGGGCACATTTACGCATCAGCCCCAAGGAGGCCCCTGGTCCTCCGCTCCTCTCCTCCCCTGCAGCCCATGTCACAGTCTCTCAGAACTCCAGGGATGCAGTCCAAAGGCTGGCAGTCTCCCGGAAATGGTCCTGGAGGGACACAGTT TCONS_00243895 s 5' 5853 TCONS_00243895 s 5' 6678 EMBV3_06789 CGGTTTCATCCGGTGTGGTCAGAATTGGTAGAATGTGATAGAAATATGGTGTCAGGGTCC Gene BVT0102_128360 + 0 NULL GK000011.2:23660018-24527368 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22190 CTTCATTTCCTTGCCCCCATGTCAGTTTTGCAAGAACATCATCCCAGCTATCTTAAGACC Gene BVV0102_233056 + 1 EMBV3_34541 GK000006.2:90102799-90232761 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209958 1 XLOC_128469 NonCoding TCONS_00209958 XLOC_128469 NonCoding NonCoding - 6:90105673-90106630 - TSS157465 957 2 TCONS_00209958_1 36 0.973876698014629 1 0 0 0 0 0 0 0 0 0 0 4.29936460816419e-06 0 0 0 0 0.000148672753540391 0 0 0 0 0 0 0.000124065639666776 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0653931236590401 0.669172027533824 -0.111258724519023 0.312784005403949 TTGAATGACCATGACTAACCCAGAAATTGGTACTGGAAGTGGAGTACTGCTAAAACAGTACCCTAAAATATGTTACATTGCCTTGGTGATGTAGCAGATGTTAGAGATACTGGCATCAGAGAACGGAAGGACACCCATGTTTTGCAGTGGCAAAAGAGGTGTTTAAACAGTTACCCATGATAATTTAAAAGCATATTATCCACCTATTGAGATTGTGACCCAGTAGAGTCTCAATAGGAAGAAATAGTTGAAAAGAGTCAAAGTAATACTGTATTTTGAGTTTTACTTTTAGTAAGATATTACTAAACAGATAAGCTCAGAAAACAGTTGCAGAAATGAACATGCATAAAAGTATTTGGAAAGATTGGAAAAGCAGAGTTTTTCTAGACCTTGAAGAGTAAAATATAAAGCTAGAAGAGGCCTTGAGTACAGTCCTGTCAAGATTTAGTCCTGGAACAAAGATCAGATCAAGACTTTGGCCTTTCCATCCAAGACCATTATTTTAGATGGTCTTAAGATAGCTGGGATGATGTTCTTGCAAAACTGACATGGGGGCAAGGAAATGAAGTAAATCATTTTTGAGAATTACATAAGCAAGAACTTTGGGTGTAGTTACTGGAAGCAAATAGATGATAGGACTAAACTTTTGAAGGAATTTTACCACTAATCAAATCATGAACCCAATTCAAGTTTGCTCACTTGAGGGAACTGTTCAACCCCAAATTTGCATAAGTAGAAAATAGGACATAAATGCTTTATAGCTCCCCAGTATTCACATAGGATGTGGCCATGGAGAATAATGGACAAAGAACATTTCAGAGGCCCATATGAGGCCATATAGAAGACAGAGGGCACATGTTTCTCTCCGAAACTAAGTTGAGATCTCATCAAAATTTCCTCCACTCTCAGGGGAGATGGATCAGAAAATTCCTGCTCAATATTTCATCCTTTTTATAT TCONS_00205744 TCONS_00205745 TCONS_00205746 TCONS_00205747 TCONS_00205748 TCONS_00205749 . 5' 2876 TCONS_00205744 TCONS_00205745 TCONS_00205746 TCONS_00205747 TCONS_00205748 TCONS_00205749 . 5' 2876 EMBV3_05533 CCCCAGCTCCGTTTCTCTGCCATGTCTTGGTTTCACTCTCCTCCTTATGTCAATCGACTT Gene BVT0102_170666 - 1 EMBV3_10940 GK000005.2:19669794-20898138 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191000 TCONS_00190998 TCONS_00190999 1 XLOC_116786 NonCoding TCONS_00190999 XLOC_116786 NonCoding NonCoding - 5:19733670-19740107 - TSS143212 1103 1 TCONS_00190999_3 93 0.114233907524932 3 0.829086389061529 8.7388688676487e-05 8.47951818755998e-05 3.27686306299171e-05 0 3.6170933727504e-11 0 0.000148733433812847 0.000115733459728376 2.13411574341784e-05 0 0 0 0 1.70588485909178e-05 0 0 0 0 0 0.00028165949094521 0 0 0 0 0.00014762237432321 0.000102200829632629 6.16075577600923e-06 0 0 0 XR_231101.1 LOC101907760 PREDICTED: Bos taurus uncharacterized LOC101907760 (LOC101907760), 3e-15 87.8 77.17 0.113327289211242 0 noncoding 1 1 1 1 -0.0535887686395669 0.651348516497601 0.0130268661909525 0.874003171583817 GCCTGCGTTCTGCAACATGAGAAGCCACTGCAACGAGAAGCTTGCACGCCACAACCAGAAGTACTCCTTGTTTCCTGCAACTAGAGAAAGCCTGCATGCAGCAAGGAAGACCCACCACAGCCAAAAAAGGAAAAGATCAGAGAGCAGAATTTCAGAGCTGTAAAAGTAAGCATAGACATTCCCTGATTCAGGATTATATGTTGCAAACCATAGAAACCTATTCTTGAAAAACTCAAACAAAAAGAGAATTGACTGGAAGGCCACGGGTGACTCACACATCAAAGGACGCTCAAGGGCCAGTTTAGAAACAGCAAGAACCTGGAAAGCTCTTGGGTTTTGTGAGCACGTTTATCTGGAGTGACACTTTCTCTTTGGATGGTATGGGATGTGATGAGAGGCCTGATACTGCTGCAGCTGTTTTGCTACGACGGACATCAAGTTTGGAGTCAAAGTCGATTGACATAAGGAGGAGAGTGAAACCAAGACATGGCAGAGAAACGGAGCTGGGGCTAACTGCACCTGAAACCGTCCTTAGCCGTGGACCTAAAATGAGTGAGCCTATGTGCTTGATCAGTTATGCTACTTTGAGTTGGAGCTACTGTTATTCACGTCCTTCAGTTACTACCTTGCCAGAAAACTTTTGTGAGCTCTTGGGTCCGTGAATTACTGATTGCAAAATGCTGGATTATATGATATCTAAAACCATCTCTAGCAAAGACTTTGTACCATTAGTGTGATTAAAGACAAGTTGGAGAAATGTATGTTGGATAATTGGACCTGCATTCTGCAATGGATTTCAGCCTTATTGTTGAAGCACATTTACTATCTAGCTAGCTATTTTCAATTCAGAAAGAAGAGATTTCATAATATATTTTCCTTTTTGTATTCTGTGTGATTGAATATTTGTGGTTCTTACAACTTTTTGTAATGCATCATCTTTCTGCATAGTTTCAAGTGTTATTAATAATCTCACTTTCAGTTGTTTTCTTGGGCAACAGGAAATTCCAAAACATGGCAGGTATTAAATAATTGTATGTTTAATTAAAGTTATGATCTTATAGATAGTTTATTCCAAAACCAGTGGTTCTTAAACTCCACTGCAC TCONS_00194079 TCONS_00194080 TCONS_00194081 TCONS_00194082 r 5' 63073 TCONS_00194079 TCONS_00194080 TCONS_00194081 TCONS_00194082 r 5' 63073 EMBV3_29388 AATGAAAAGGTGGACCTGTGGTGCATCGGTGTGCTCTGCTACGAGCTGCTGGTGGGAAAC Gene GeneID:360192|AURKB:NM_183084:451_cdna UTR3_Alt 2 NULL GeneID:360192 19 GENE AURKB MGC142782 STK12 aurora kinase B EMBV3_08452 TCCTAAGTGCTTTGCAGGCAACACTAGCACCACCTCCAGCCCCATCAGGACCACTCAACA Gene BVT0102_189180 + 0 NULL GK000015.2:76203528-76573742 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07980 CCATCAACTAGGCCATTTCTTTCACATTTCCAAGCACATAAATCTTGGGAATGCGCATGC Gene BVV0102_057408 + 0 NULL GK000008.2:68114227-68323699 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24048 CCCCTTAAAAATGTTTGTTATGAGTTTCTGTAGACCGTCTTTACTAAGTTAGGGAAGTCG Gene BVV0102_163426 - 1 EMBV3_42890 GK000001.2:151021273-151034216 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011949 1 XLOC_007499 NonCoding TCONS_00011949 XLOC_007499 NonCoding NonCoding - 1:151022839-151027510 - TSS9026 4671 2 TCONS_00011949_1 102 0.806465424962535 1 0 0.00037866485280727 0.000307866914361525 0.000292220766957595 0.000275560225871449 0.000195014067400372 0.000375242307872528 0.000414678180043433 0.000423818473609675 0.000654132210160297 7.92773198930629e-06 4.90086014460663e-07 2.29652083983881e-05 5.00634422577703e-05 0.000126386819067086 6.72226147009217e-05 0.00023182928773768 0.00012084727853557 3.76014192833012e-05 0.000401953920880516 0.000234788574116115 8.903762340922e-05 3.01848025186905e-05 7.85616788504371e-06 7.53708176423735e-05 0.000350056778954083 0.000180624121955309 0.000164478560209344 1.6450729587994e-05 2.07861791987099e-06 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 3e-54 219 81.09 0.0507385998715479 0 noncoding TTCTGCCCAGGGTCCTGGCGATAGAAACAAGGTAGACAGCTTACAGGTTTCAATCCTCCTTTGGGAGCAATTTCCTCATAATTACAGCTCTGGTTAGGTACATTTTGTATTGCAGGAAATTTGCGTTTTATCCTAAGGGATATGGGATTTATTACAAGGCTTCACAGGGAAGGAAACTTCAAACATATTAGAAACCCAGCTGCTCCTCTTGGTTGTCAAAGGTTCGTGCTCTGCGCTCAAGGGCTGCGTTTTTGGTCTCTGTTTCTCCCTGTTCATTTGCTCAGTTTTCTTACTCTTGCCTCATTTTCTGGCATTTTGTTTCTTTTCAATTTCTGGAAGGTTTCAGACGTAGAATACAGAGTGGGATCTAACCAGTTCATGACTGAGATTTACAGATGTAATTATTTTGCCGAATTTACTTCAGATCCTCTTTTTAGTTTAAAGAACTAAAATTGCAAAATATGGAGGTGCTCTCATTCCCGCCTCTCTTTTCCTAGCGGTAGTCACCGTGTTTAGGTTTGTGTATATTTCCTTGCATATTTTATACTTTGATCACGGTGAATCCATTAACAATATATAGTGTTGTTTTTTAGTGTGTATTTTAAACTTTAATGGTATTAAACAATATGTGTCTTTTTGCAACTTGCTTTTTTCGATCAGCATCCCATTTTCAGATTTACATGTGAATAAATTGGATAATTGTGTTTGGTTCATTTTAATTGCTGATATAGAATTCCATTGTATGAATATACCATAATTTACTGATCCGTTTACTAATCCGTTTTCCTACCGATGGACTCTGAAGGTTTTTGACTCTAAAAACAGTCCTGCTTTGAACATCCTTGTATTTGTCTGCTTTGTGCACGTTTGGAAATTTCTTGAGAAAATACACCTAATAGTGGGTTTTGCTGCATAGTAGGATGTATGCATCTTCAATGTAACCAAATATCACAGAAGCTCTCAAAGTGCTTACACTAACTCATCACTCTGAGTGGTACTGAGTGAAGACACCCATTTCCTCACACTATTGCTAAACCCTTTATGTTACCTGACTTACATTTTTGCCTCCTCTTTACTGACCAGCTTCCTTATAACTTTAACTTGCAGCTGAATTTGCCTACAGCCGCCTTGGCTTCTGCTCTAGCCCTGTGTAAAGCCTATGGGTTCCTCTCTCAGAGCTGACTCAATCTTTTATCTCATTCGGTTCTCATAAAACTAATTGCAGTGAACATTTATTTTGTACCTAATGTACTTCCTATGGTTGATGTAAGATAAAGATTTCCATGGTATGTTAGATGTACCTCTCTAGTGGCAGGTGAGGTGATTTAATTATTTTTTGCATATGATGAATGGGTTTTAAAAAATCTTTTTTCCTCTTTAATGTACTACTTATACTTAATGCTTTCAAAATATGTGTAACATATATACAAGTTGTGAAGCAAGGCAATAAAATGAACGCCTCTCAACCCACCACTCAATCCAAGAATCAAAATGACCGATTTTGAATGTTACCATCCCCAGGGTGACTTCTATTGAATTGTGTGTCATTCCTTGTATTTTAAAAATAATTTTATCAAATATGTGTATATCCCTCAACAGTGTATTGTATGGTTTCTATTGTTTTTGAATTTTACAGTTTGTTGGGCTGGCTTATTTCACTCAGTGTTATGTTTTTGAGAGTCACTGATATTCAGATAGACATCTCATTAATTTTCATGGCTGTGTAATATTCTGTTGGAGAATATAACACAGTGTATGTACTCTTCTGTTGATGAACATTTTGGTTGTTTCTAGGTTTTGCTATTTTGAAGATTCTTATATATTTCTTCTGGTACACAGTTGCAAGAATTTGTCTGCTTTTCACACTGGGATATATGCCTTCCAGGGAAGTAATAAAAATTTTCTGAGGGGTATTTGGGCACAAGTGATATTAATGAATCAATTTGTAGATACTAAATTCCACGTGTATCCTTTCCTAAAATTGGTAATGCCTGAAGCCTGTGATAGAAACTTCCTCTTGGCTCTACTTGCCCACCTCCCCCTTCAGAGTAGCATTTCTGCCTTAAATTAGGAAGGCATACCACTTACTTGCATGGAATCTTATCAGGGTAACGTCCCAATTGAAAAACTCTCCATGGAACAAAAGGATAATTTAAAATACATGCAGCTATAGTGTTAGGAAACACTTCTTTTAATGCAGACACTTTCCATCTCCTCAAGAGCTGCGTTTCCAATAAAGTGTAACTTTTATGTTTAATTATCAGCATTATGTAGGGTTTCCCAGGTGATGGTAGTGGTGAAGAATCTGTCTTCTAATGCTGGGGGTGTAAGAGACGCAGGTTCAAGCCCTGGGCAGGGAATATCCTCTGGGGGAGGGCATGGCAACCTACTCCAGTATTCTTGCCTGGAGAATCCCGTGGACACAGGAGCCTGGTGGGCTACCGTCCATAGGGTCACAAAGAGTGGGACACAGCTGAAGTGACTTAGAGTGCACACACACAAACACATCAGCATATATACTAGTTATCTTTTGATGAACTCGATGCTGTAATAATTACAACATTTTAAACCAGTGATATGTCAGTGTTATTTTAAAATGTCACTGTGATACTCTAGCAATTAAACTTAGGACTGAAATTTTTTAGATGTCATTTAAAGTATGAGTGTAATCTTTAATAGCATTTATTGTGGTTCATCAGTAAAAAGAATGTTGAAATACCACTGTGGTAAGCTATTTACTAGAAGTGGAATTGCTGGACTGTGGGGTATGAATATATGGTTCAACTATAAAATGACACCAAATTGTTTTCTGAAGTGGTTGTACCAGCTTATGCTTTGGTGAGCTATTTTGTCAATTTATATACTTTGATTAGCATTGTGTTAAGATTTACAGTTGATCTATATCCTTTGCAACACTTGTTACTTGTCAAACTTCTTAATATTTGCCAAATGGATATGAAATGTGCATTGTGGTTTTAATGTGCATTTATTGATTGTTAATGACTTTGAACATCTTTTCCTTTGTCTGTGAACCATCTATCTCCCTTTTATTCACAAAAAGGAAATTGATCGTTCACACACAGACACACACACAAATACCTGGTCATATCTCTCACCCACTTTTCTGTTGGGTTCTCTTTTAAAACTGTAACAGGTAACAGTAATCGTTTATTAGGAATATACATTGTAAATATCTTATTCCAGTTCGTGGTCTTTTTGCACTTTATGGTGTGTTTTGGTGAACAGAAGTTCTTAATTTCAAGGTAATCTAATCGGAAATTTACAATGCCCTGGGATCATCAAGACATTCTCCTGTGTTTCTCTTTAAAAATTTTTAAATGATGCCTTTCACATTTAAGTTGGTAATCCATCTGGTACTGATTTTTGTATATGGTGTGAGTTAATGATCCACACTCATTTTTCCCTCCATGTGGCTACAGTTGACCACATACCATGTATTGAATTGGCTCTCTGTTCACCAGTGATCTGCTGAACCACCTTTTTTTACATGTTTAGTTTCTATATGCATGGATCTGTTTCTGATTCTCCTTTCTGTACCACTTGTCCACCTGTCTATCTGTTGATAGCACACTGTCATGATTATTAATGCTGTAGTTTTACCTGACATCTTGATGTTTGGGGGGCACTTGAGTCTTAGCTGTTTTTGTAAGAATCTTGTCATATGGCAGAAGAAGCTTTTCAGGAATGAATTGGAATGATTAAAATCAGTTTGGAGAGATTTGAAATCTTTAAGATTTTGAGGTATGTATTTCCATTTATTTAGGTTTCTAATGACTTTGATACAGTTTTGTGAATTTTTCCTTACAGATCTAACAGTTTTTAAATGTTGATTCTGATGTTTCTAGGAGTTTTGTTGCTGTTACAAATGATGCTTTTTAGATTCTGTTTCCTGTTTGTTAATAGAAATTTATGGATTTTTTTACACTGAACTTTAGTCATTCACTTGATAAACACTTATTCTGATATATTTTCTATAATTCTTTTGGGTTTTCTATGTGGATAATTATATCACTTGCAAATAGTGACACTTTTGGTTCTCCTTTCCTTTCCAATTTTCCTTAATTTTTTTTTTCTTGGCTTATTATGCTGGCACACTTCTAGATCTATGTTTGATGGATGTGATTATGGTTATTAGAAGTGATTTATAGTGAGCATACATGTTTGTTCTTGATTTCAAAAAGAATGTTTTCCCCTTAAAAATGTTTGTTATGAGTTTCTGTAGACAGTCTTTACTAAGTTAGGGAAGTCGTCATTTGCCTATTTTGTCACATGCTTCTCTGCGTCTGTTGACAGTATCTTGTGGATTTTCTCCTTTAATACACTAAGTGTAGTGGTTCCAATTTATATATTTAAAAATTCTTAATTCTCTCTTACATTTGTTCTTAAGATAGATGTAAGTTGACTTTGATGGGTTGTCTTTTTGTGAACTGGATGAAGTTTGCTAGTATTTTATTTAGATTTTTGCATCTGTTGATGAATGAAATCACCTGTCATTTTTTTTCTTGACTATCTTGTCTGGTTTTGGTGTTCAGGTTACACTGCTTTATGCCAGGTACAGTGATTCATTTTTTTTCTCTTCTCTGGACAGTTTGGATTGGAGTAATTTGTTTCTTAAAAGCTTGGTGGCATTTACCTGTGAGATCGTTTGGA TCONS_00002679 . 3' 212 TCONS_00002679 . 3' 4882 EMBV3_37359 CCCCATCTATGAAAGAAAGGCAGGCTTGTTGTGGAGCCCGCGATGAGTACTGGAAGTGTT Gene GeneID:100296941|LOC100296941:XM_002688077:109_cdna Constitutive 0 NULL GeneID:100296941 6 GENE LOC100296941 NULL hypothetical protein LOC100296941 EMBV3_31252 GAGCTGGAAGGGGCCGAATTCACCCTGCCCAAGATCACCAGGAACTTCTATGTGGATGGC Gene GeneID:505159|FDX1L:NM_001080226:303_cdna Constitutive 7 NULL GeneID:505159 7 GENE FDX1L MGC152067 ferredoxin 1-like EMBV3_01032 ACTCAGCAATCCCCATAACAACACTTACTTCTGACACCAATTATAAGTTCCCAAGACTAC Gene BVV0102_315707 + 0 NULL GK000002.2:9870251-10364758 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18821 CAGCCTTTACCTATTAGTTAACAGAAAACCAAGGCACTTAGGAACATACTGGTACGTTGG Gene GeneID:516881|SGPP1:NM_001077931:118_cdna UTR3_Alt 2 NULL GeneID:516881 10 GENE SGPP1 MGC142448 sphingosine-1-phosphate phosphatase 1 EMBV3_11547 CTCCCGCCTCTGTCTGTTCTCTGCCAGTTTTTACCTGACTCTTTCCACGTGACTGTCCCT Gene GeneID:540819|FOSB:NM_001102248:370_cdna UTR3_Alt 2 NULL GeneID:540819 18 GENE FOSB MGC143206 FBJ murine osteosarcoma viral oncogene homolog B EMBV3_13176 GAAACTGAGGTCCTGTGGAATGAGGTCTAAAATTGATTCTCTTCTTCCCGAGTTTGGTCC Gene BVV0102_318320 + 0 NULL GK000024.2:34978004-34993825 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29667 TATTCCCCTCTCTGCCTCCAATGAACAGAGCTGAGTCTAGCATGGAATAGTCATCCCAGG Gene BVT0102_175975 + 0 NULL GK000005.2:96761517-97079891 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201099 1 XLOC_122747 NonCoding TCONS_00201099 XLOC_122747 NonCoding NonCoding - 5:96774399-96774979 - TSS150667 580 1 TCONS_00201099_1 38 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000259637716321556 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.270654473057933 0.343611000824116 -0.02230542314223 0.68101251358346 GGTCATTCCTCAAAGCCTGGTTCAGGACCCTGGCTCTGAGAGAGAATATGGGCAGAGAGAAGAGGTGAGTTTAATTTCTATGTACAAGGATGGTCATTCCTCAAAGCCTGGTTCAGGACCCTGGCTCTGAGAGAGAATATGGGCAGAGAGAAGAGGTGAGTTTAATTTCTATGTACAAGGATGATTAGAGGAAGACACTAGAGCCCTCCTTAAGCTCAAAGTTTAGAATGAAGCCAATTACAAATATCCTTTCTCTCCTGTCTGCCACCCGAGAGGCTGCCTGAAATCATGATGGTATCACAGGAAGCTAAGAGAGAGAGACAGGGGTTCCATCTTGAGTCCCTGGGAGAGTCATCCTTCACAGGAGTGATGCTACAGATACTGGGTCCTAATGCTCCTTCATGAGGAGTAGCAGGGCCAACGGCTGATCATTCAGAGCATCTTTCATGCCTGGGATGACTATTCCATGCTAGACTCAGCTCTGTTCATTGGAGGCAGAGAGGGGAATAAAAGGATTCCTGGGGACCCTCAGGTCAAGAAATAACAGAAAATTATTCAATCAAAACTACAGAGATGTTGT TCONS_00192882 TCONS_00192883 TCONS_00192884 . 3' 10897 TCONS_00192882 TCONS_00192883 TCONS_00192884 . 3' 11476 EMBV3_06525 CTGTGTTATGCGACCTTCGTTCTACCAGGTAATAGATCCTTGGTGGATCCTGAACGATGC Gene GeneID:100296819|LOC100296819:XM_002697278:49_cdna Constitutive 0 NULL GeneID:100296819 23 GENE LOC100296819 NULL hypothetical protein LOC100296819 EMBV3_10570 CTGATCCTTATTTTGCTGCTTCTGCTACTTGTTCGGAGGAGAAGGGTGGTCAAAGAGCCC Gene GeneID:282637|CDH1:NM_001002763:66_cdna Constitutive 0 NULL GeneID:282637 18 GENE CDH1 NULL cadherin 1, type 1, E-cadherin (epithelial) EMBV3_30255 GACGGGTTCATGACGCACTACCTGAGAGAGATTGCCTTGGATTGCCCAGCTGAGCTCTGC Variant GeneID:616003|TM6SF1:NM_001102295:54_cdna 319^732 3 EMBV3_06267 GeneID:616003 21 GENE TM6SF1 MGC159520 transmembrane 6 superfamily member 1 EMBV3_19145 TGAAAGGGAAAGTGCTGGTGAATGAAAAAACCTGGGCTAATCTTCTGAGTCGTGTCACTC Gene GeneID:510950|KIAA1712:NM_001076833:26_cdna Constitutive 3 NULL GeneID:510950 8 GENE KIAA1712 MGC143238 KIAA1712 EMBV3_26089 CCTACACCATCGTCTACTTCCCGGTTCAAGGGCTGTATGGGAAGGACCAGCAGGAGGCGG Variant GeneID:281806|GSTP1:NM_177516:461_cdna 110^304 2 EMBV3_15755 GeneID:281806 29 GENE GSTP1 NULL glutathione S-transferase pi 1 EMBV3_36904 ATGCACTGGATACCTAGGGAGTAGGATAGACACAAAACATATAAACTTAAAACATGTGTC Gene BVT0102_367730 + 0 NULL GK000015.2:22552368-22566984 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063579 1 XLOC_038306 NonCoding TCONS_00063579 XLOC_038306 NonCoding NonCoding - 15:22557289-22559956 - TSS47322 2667 2 TCONS_00063579_7 126 0.800899887514061 1 0 9.692836588729e-05 0.000137520666558434 1.73490795665446e-05 0.000158796567776001 0.00013513843958067 6.70613916321865e-06 2.84259863448725e-05 0.000137499818066515 0.000239633673539129 6.17096555485325e-06 0 1.69823957162577e-05 3.06616204703525e-05 0.000131988919924887 6.43859935930802e-06 0.000376317979438553 0.000286353685851625 0.000663256148857931 0.000243332858011392 2.02233733663872e-05 5.40671231791309e-05 1.25208091439968e-05 0 4.08587586811525e-05 0.000213023959954482 3.56632461485016e-05 9.8860833167e-05 0 5.46076765891894e-06 1.15220321190709e-05 XR_138822.2 LOC100847572 PREDICTED: Bos taurus uncharacterized LOC100847572 (LOC100847572), 3e-50 205 84.62 0.072365954255718 XR_111226.3 MGC39545 PREDICTED: Homo sapiens uncharacterized LOC403312 (MGC39545), 2e-53 215 75.94 0.116610423697038 0 noncoding 0 0 0 0 AACTAAGAATTTAGCTGACTGTAGCACAGTTTTACTGTCTGAATAAATAAAGCCCAACAAATTTTCTCTACCCCCACTCTTTTAAACCAAGATTTAAATGTCAAATTTAAGTTAAGTATATTTACTCTTATTCTACATTACGAGTGTTGTAGAACAGCATTGAAAAGAGTTATTTCTTTCAAATCTACAACCACTCCGCTCTTCCCTGCCTTGTGTGAGGGGCAAAGCTGCAAAATCCATCCTGACTTAGGCCACATTTGGCTAGATGCTTTCTGGATGTGAGCCTGGTAGTCATGGTCAGGTAAGTTATATTTACTGTCCTTTAATGCATATCCCCTCTTAAGGACTAGAAGAAGAAATATAACTATTTTTATTAATATGGAAAATTTGAAACATAAAAAACTAGACAGAATAGTATAATGAACTAGCATGTACCATTACCCAGCTTCAACAATCGATGACCAATCTTATCTATCCCTATTTACTTTCTCTATTTTTAAATTTTTCTCTGAAATTATATAATTTCATTTATAAATATTTCAGTTTATATCTCAAAAAGAAAAGACTGTCAATTTTTGACTCCCTGATGAAGATTGCCAAAGAAAACTGCTGATCAGACAAAGCTGAGTTGTTTATTAAACCTGTGACAAGGAAGAACCTCATCTTGACACAATCTTGGTAATGATTCAGAAAGGTGATGTTAGGGTAGGATACTTTTAGGAATTTGGGATGACTCAGCCAGTTTAAGATGGGTCTTTCGTTGTGAGGAACTGGCTACAATTGAGAAAAGATTGTGAATAGTTTAGGGTTGGTGAACACTCAGAGGCAATGGTCTTAACATCAGTACTTTCCTTTTTTTTTTTTTAATCTCCTATTTAAGATGACAATGTAATATATGGGAACTGTCTCCCATATATTACCTCCCAAACCTTCATTATTTTTTGAAACAGGTATGAATATGGAATTTATGTTATACATGATGTTGGGTAGTGACTAAGTTTTGTTTATTTCTGTATGGCTATCCAGTTGTCCCAATATTAGTTATTAAAATGACCATCCTTTCTTCACTGCTCTTCAAAGCCATTTTTAATATAAATCAACTATCTGTGTATACTTGGGTCTGTTTCTGGGCTCTCTATTATATTCCATTAGCCTAACCGTTGTTTTTTATTTAATCCCATCTTAGCTATAATGCCTTAATTACCTCACTATCTTAATTATGATAATTGTATAAGTCTTAACATCCAGTAGATCAAATCATTTTACTTTGTGTTTCTGCAAGAGCATCTTAGCTATTTTTGACCCTTTGCATTTCCATGTAAATTTTAGAATCAGTTTGCCAAGTTCCACAAAAAAGATAGGATGTTGATGGAAATTGCATTGTATTGTTTGATCAGCTATAGAATTTGAATTATTATCTCTTACTAATATTAATAATTAATTGGTATATATTTTCCAGTATGAATATTTTATAGACACATGTTTTAAGTTTATATGTTTTGTGTCTATCCTACTCCCTAGGTATCCAGTGCATTTCTTATTGTGATAAAATATAACATAAAATGTAGCATTTTAACTGTTTTTAAGTATACAATTCAGTGGCATTAAATACATGCACAGCGTTGTGCAATCATCACCACCGTTTCCAGAACTTTTTCATCATTACAAACTGAAACTCTATACCAATTAAGCAACAAATCCTCGTTCCCCTCTTCTCCTGTCCCTGGTAACCTCTATTCTATTTTCTGTGTCTATGAATTTGCCTGTTATATGTACCTCATATAAGTGGAATCATACGATATTTTTCTTTTTGTCTCTGGTTTATTTCACTTGGTTTGTTTTCAAGTGTCATCCATGTTACAGCCTGTGTCCTTTCTAGGACTTCCGTTAGATTATGCCACATTTTACTTCTCTGTTCACTCGTTAGTAGACACTTGGGTTGTTTTCGTCTTTTGGGTAGTGTGGGTGCTGCTGCTATGAACACTGCTGTGCTGTGTGCGCGCTTCGTCGCTTCGTATTGTCTGACTCTTTGCGACTCCATGGACTGCAGCCCGCCAGGCTCGTCTGCCCATGGTGGTTCTCCAGACAAGAATACTGGAGTGAGTTGCCATGCCCTCCTCCAGGAGATCTTCTCAACCCAGGGATCGAACCCAGGTGTGTCCCGCATTGCAGGCAGATTGGATTCTTTACCAGAAGAATCCCTGAGCCACCAGGAGAGCTATGAACATTGGTGCACAGATACTTGTTTGAATCCCTGCTTTTGATTATTTTGGGCATATACCCATAAATGGAATTGCCAGCTTATGTGCTAGTTCTATTTAACAGTTTGGAAATGCCACAGTTTCCCATAGTGGCTGCACTTTTTTACATTCCCACCCGTAATGAACACACAAAGGTTCCAATTTCCCCACACCGTTACCAACACATGTTTTCTGGTGTTTTGTTTGTTTGTTTCCATTTTATAATAGCCATCCTAGTGGGTGTAAAATGGTCTCTCATGGTTTTGATTTGTGTTTTCCTAAGGGCTAGTGGTCTTGAGGATCTTTTCATGTGCTTTTCAGTTATTTGTATATTGTCTGTGGAGAAATGTTTATTCAAGTCCTTTGTTCAATTTTTAAATAATTTATTTATTTTGGGACTGTGTTGGGTCTTGGGTCTTTGTTGCTG TCONS_00058509 TCONS_00058511 TCONS_00058512 . 3' 4338 TCONS_00058509 TCONS_00058511 TCONS_00058512 . 3' 7004 EMBV3_23761 TGGTGCGCGAGATCGCACAGGACTTCAAGACCGACCTGCGCTTCCAGAGCTCTGCGGTGA Gene GeneID:788250|LOC788250:XM_002697527:264_cdna Constitutive 0 NULL GeneID:788250 23 GENE LOC788250 NULL similar to histone cluster 1, H3f EMBV3_20984 TGACCAAGAAAAGCAGGAACAATGGTGCCAAAAAGGGCCACAGCCTCATGCAGCCTATTC Gene GeneID:786091|LOC786091:XM_002688079:115_cdna Constitutive 0 NULL GeneID:786091 6 GENE LOC786091 NULL similar to 40S ribosomal protein S26 EMBV3_17327 GTTGGTTACATAGCAGAGGCACCCTGGAATTTATCTGACAAGCGAGGAGATCCCAGACAT Gene BVV0102_133469 + 0 NULL GK000024.2:5856866-6401556 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00929 AAGAACTCATGTCTGAGTCCCATCCTGAGGAAACACTGACGAAACCAGGCTGAGCTCTAG Gene BVT0102_106097 - 1 EMBV3_11924 GK000022.2:12558896-12613416 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129962 1 XLOC_078673 NonCoding TCONS_00129962 XLOC_078673 NonCoding NonCoding - 22:12580354-12581066 - TSS96829 712 2 TCONS_00129962_1 88 0.73876404494382 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.86545937554959e-05 0.00051800711945698 0 0.000306755479719025 0 0 0 0 0 noncoding 0 0 0 0 -0.0352439581440375 0.832019095683221 0.0137979588930582 0.773577889360627 AGTTGCAGAAAAGAATTCTAGGAAATTACAAATATTAGTTAAATTGAAAAAAGTCTGTAATAGGACTGAGAGATAAAATTGCAGAATCTCTCTCTGGGGATACTCATGATAAATAAAATTTGTTTATATATTATTTAAAATATTAAAAAATATATAAATATATATTTGCAGCAGATGTTCTAAACCCCCCAGATCTTCTTTGTGTATCTTTCCAAACCAAGGACAGTCCTGCATAACCAGCATGCAACCCTCCAGAGCAGGAGATCAGAAATCAGCATTGGTGTGACACTGATACCTGACCCAAATGTTTTAGTCAAATTTCACCTATTATCCCAACAAAGTCTCTTTTCTGTTTGGCCTGGGATCACACTTTGCACTTAATAATTGCGTCTCTTTAGTCTCCTTCAACCTGGAACAGATGCTTAGTCTTTCCCTGTGTTCACAACATTATAGTTCGAAGGAGTACAGGCTTTTCATTCTGTCGGCTAGAGCTCAGCCTGGTTTCGTCAGTGTTTCCTCAGGATGGGACTCAGACATGAGTTCTTGGGAGAAATATACCGAGGTGATGCTGTCCTCTCCTCACTGCATCGCATCAGGAGGCTCAGGATGCTGGCCGGTGATACTACTGGTAATAGCAATCTCCATCTCTTGGTCAGTTTGGTGTGTTCAGGTTTCTCCTTGTTAAGTCATTATTCTCCTCTTCATAATTAAT TCONS_00127998 . 5' 21460 TCONS_00127998 . 5' 21460 EMBV3_34815 TTACAGAGCCCCGAGCCATGGTGTTGAGATCTTGAGGGACTTGGGGATGTGGTCTTAGAA Gene BVV0102_029994 + 0 NULL GK000012.2:30600820-30833957 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13785 CTGCCTCTTCCCTAAATAGTTGCCTTTTAGTGCTGTGACAGTTAAATCCTACAGCATAAC Gene GeneID:787530|CNN3:XM_002686040:236_cdna Constitutive 0 NULL GeneID:787530 3 GENE CNN3 NULL calponin 3, acidic EMBV3_29864 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39785 CTTCATTCCCATCTCAGCCCCATAATCACTGATCTGCTTTCTGTGTAAGTTTGTGTCTGG Gene BVT0102_072756 + 0 NULL GK000010.2:36936266-36937711 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016833 TCONS_00016835 TCONS_00013509 TCONS_00016831 TCONS_00016836 TCONS_00016834 TCONS_00016837 TCONS_00016832 2 XLOC_008921 XLOC_008144 Coding TCONS_00016836 XLOC_008921 Coding Coding NDUFAF1 10:36936555-36953674 j TSS11659 3108 1 TCONS_00016836_2 328 0.345238095238095 6 0.818787241500175 0.000525942004501346 2.8237221821047e-10 1.14295379129439e-08 0.000127530173494539 6.60314961835412e-05 0.000167945985743653 0.000167184495489833 1.9002852839719e-07 0.000286443614920912 0.000142526034615226 0.000230663852799933 0.000266718931009189 4.25478816425232e-10 1.28030014197808e-10 2.23853700623034e-10 0.00413951157725727 0.00410678030637064 0.0023351194403795 0.000167060756067386 1.02259669803592e-08 4.65263389872611e-05 0.00262450374394658 0.0013128082860103 0.00207456920232259 6.26409813938973e-05 0.000274649122106341 8.12522955956951e-13 0.000972441575674486 0.000492020093263664 0.000981980839878569 NM_001206074.1 NDUFAF1 Bos taurus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 (NDUFAF1), mRNA. 0.0 3276 100.00 0.583976833976834 NM_016013.3 NDUFAF1 Homo sapiens NADH dehydrogenase (ubiquinone) complex I, assembly factor 1 (NDUFAF1), transcript variant 1, mRNA. 0.0 1315 85.33 0.367117117117117 TCONS_00016836_2 sp|Q9Y375|CIA30_HUMAN CIA30_HUMAN Complex I intermediate-associated protein 30, mitochondrial; 0.0 566 82.93 0.996951219512195 1 coding 0 0 0 0 0.0304156843857592 0.843712008344553 0.0110103866381731 0.830657206946958 CCCACGGGGCCAGATTGGGGAAGGGCGGACTCATCAGGCCTGGTTTTACTCCGGACTGGAAAAACAGATGGCCCCGCACAGGAAAAGTGGAGTACCCGGTCTGGAAAAGCGGGGAGTCGAGCGGAAGTCACGCTGAGGCGCCGACTGGGGAGGCAAGTGAGCGCCTGCTTGGAGTTGGCGTGTGGGGAGCTTGTGAGGGTGACACGGTCCTAGCAGGTGGAATTGGGCTATTTGCTGAAGCTTCTTTCCTTGGTAGCCCTGGGAAAAATTTACATTTTAATTTTTTTTTTATCATGGCTTTGGTTCATAAATTGTTGAATGGCACTTATATTCTCAGAAAATGCCCGAAGCCAAGAGTTGCCTCTTTTCCATTTTTGGGGACTCGCTTTGCAGACTATTGTTCCAATAGTTTTCAGAAACCAGTGGCTGCTCCTGGCAAAGCCTCTTCTCAGAGGAAGACTAAAGGGAATTTGGAAGAACATCACCAGAGAGAAGTTGCTTTGGAAATAACTTCTCCTGAGGACAAGCCTGAAATTAGTTTTGATAAAGCAATTAAAGAAGAAATGAAGGACCATTTTAGGCGTTTGAAGGATGATATTGTGAAATATTGGATAGGGCCTGAAGGCCGCCCTCTGCATGAGGTCTTGATGGAACAAGCCAAGGTTGTCTGGCAATTCCGTAGCAAAGAAGATTTGGATAAGTGGACAGTAACTTCTGATAAAGTGATTGGTGGCAGAAGTGAAGTGTTCCTGAAAATGGGCAAGAATAACCAAAGTGCGCTGCTGTATGGAACTCTGAGCTCCGAGGCGCCCCAGGATGGGGAAAGTGGCCGAAGTGGGTACTGTGCTATGGTATCCAAGATTCCAAGGGGCCCTTTTGAAATGAAGAGATCTTACGATTGGTCCCAGTTCAACACTCTGTATCTCCGTGTCCGTGGAGATGGTCGACCTTGGATGGTGAATATCAGGGAGGACACAGATATAATCCAGAAGAAGGATCAGATGTACAGTTACTTCATGTTCACCCGTGGGGGGCCCTACTGGCAGGAGGTCAAGATTCCTTTCTCCAAATTTTTCTTCTCTAATCAAGGAAGAATCCGGGATGCCCAGTACCAGCTTCTGCTCGACAAGATTTCATCTATTGGATTCACCCTGGCTGATAAAGTGGATGGTCCATTCTTCTTGGAAATAGATTTTATTGGAGTATTTACAGATCCCGCCCACACAGAAGAATTTGCCTATGAGAATTCTCCAGAGCTTAATCCAAGACTTTTTAAATAGTGATCATGTGGTATTTCTGTATTGCTGAGGGTAGTAGAATCCACAGTGACACAAAAATATTTTTTTTAATGGCGTCCCAACAGTGGCTTGTATGTCTTCCCTAAGACATAGCTAAATGCTGCTGTTGAGAGGAACCAGGATTTAAGCGATACCTTAACTTAAAGAATGCAAGTACTGATGCAGAGTTACTATGTAAACAACTGTTTTGGATTAGAATGATTCCTGTTAGGAACAGTTCCTATACTAATAGATGGTTCCCAAAACAGGGAGGCTCTGAAATGACTGCTGATGGCCTACCATTCTGTTCTGTATATGTTTCTTCTGTTTTCGAATCTAGCTATCAGAGGAGACTGCTGTAGAAGACATTAAGATAAAGATGGTATAGAATTCACTGGGAAAAAAATACCTGTTTTATTCTGCCGGGGCTGCTGTAACAAATCACCGTAGACTAGGTGGCTTAAACGAAACACATGTGTATTTCTCCCAGTTTTCTGGAGGCGGAGAAGTCCAGTATCAAGGTACCTGCCTACCTGGTGTCTGTTGAGTGCTTCCTGGCTTGTAGACAGCTGCCTTCTTACTGTATCCTTACATGGAAAGAACAGGTTCTAGTCTTTTCTCTTCATATAATAGCATTAATCCTATCATGAGGGCTCCACCCATATGACCTGATTACCTCCCAAAGGCCTCCAAGTGCACCTCCAAGTACCAAGTCACATTGGGAATTAGGATTTTTGACATATGAATTGGGAGGGAGTGGTGGCCACAAACATGCAGTCCCTAACATCTACATTGCTGGTGCTCCGAAGATGCATGATCTTTGGCTGCTTCCCCAGTCATTTTAAGTATTAGAGATTGCGTGTGCCAGAAACAAAACCCTGATTAAGTTTAAACTGATCAATTCTTGTCCTGTTAGAGGAGACAGGAAACTATATGATATAGCCAGAGTATCCTATAAGAGCCAAGTTTAAGATAAGAATACACAAGGCTGACAGCTTTTCCATCATGTTGGCCTAAAATATTTTCATGTAATTATTTGTCTTTATCAGCTTTATGGAGGTATAATTTACATAACAAAGTTCATCTGTTCTAAGTGTATAAATTCAGTGATTTTTTTGGGGGGCCATACTATGCAGCTTGCAGGATCATAGTTCCCCAATCAGGGGTTGAAGCTGGGGCCACAGCAGTGAAAGCACGATGTCTTCACCATTGGACCTCCAGAACTGTACAGTCTTTATGCAGCTAATTTTAGGAAATTTCAGCTTCCCTGGTGGCTCAGGTGGTAAAGAATCTGCCTGCAACGTAGGAGACATGGGTTCGATCCCTGGGTCAGGAAGATCTCTTGGAGATGGAAATGGCAACCCGTTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAAGAGCCTGGCAGGCTATACTCCATGGGGTCTCAAGAGTCAGACACGACTTAGTGACTAAAACACCTAAACTCTTCATTCCCATCTCAGCCCCATAATCACTGATCTACTTTCTGTGTAAGTTTGTGTCTGGCTTTTCATTTCACATAACGTCTTTGATGTTCATCCACGTTGCATTGTTTATCAGTGTTTCATTTTTTAGTGCTTTTTAAAATCCATCCATTGATAGTTGGATTTTTCTCTACTTTTTGGCTACTGTGAATAAAAGTGCTATAAATATCTGCACGTTTTGGTGTTGACATATGTTTTCATTTCTTAGGAGAATTTCTGGGTCATCTGATAGGTGTATATTTAAATTTTTAACGAAACTAGAAAGCTGTTTTCCAAAATAGTTGTATCATTTTCCCTTCACAGTAGCAGGGTAGTTGACAG EMBV3_21033 CAGCCTTTGACTTTAGCAGGAGTTTAAAGGTGTCGTAATCTTGGCTAAAACGGCCCTCAC Gene GeneID:281131|DSG1:NM_174045:61_cdna UTR3_Alt 2 NULL GeneID:281131 24 GENE DSG1 NULL desmoglein 1 EMBV3_13311 GCCTATAGCCTCACCTATAACACCATCGCCATGCACAGTGGAGTAGATACCTCCGTGCTC Gene GeneID:509863|SESN2:NM_001024507:114_cdna Constitutive 1 NULL GeneID:509863 2 GENE SESN2 MGC140133 sestrin 2 EMBV3_36362 TCGCACAGCGACCCCTCAGTGTGGTAACAATGGCCCCGTTTTCTCCTCTGGACGAATAAG Gene GeneID:515212|VMAC:NM_001105371:54_cdna Constitutive 0 NULL GeneID:515212 7 GENE VMAC NULL vimentin-type intermediate filament associated coiled-coil protein EMBV3_14528 CATCTGACTGGGGTCTGTGTTACTTCTGAGGTGTGGGTACCAGGGCCTTGAGGGAGCAGT Gene GeneID:615368|ORMDL3:NM_001076367:219_cdna Constitutive 0 NULL GeneID:615368 19 GENE ORMDL3 NULL ORM1-like 3 (S. cerevisiae) EMBV3_37535 TAGCACTCTCCAGATACTATTTTATGGAAAGACCCAGGCACACAATTCTGAAAAATACAG Gene GeneID:514028|DSE:NM_001113232:16_cdna Constitutive 0 NULL GeneID:514028 9 GENE DSE NULL dermatan sulfate epimerase EMBV3_43266 TCATCACGGTGGACGCTGAGCTCTCGTTCTTACCATGCGTTGCCGTTTGGTCCACTTTTA Gene GeneID:100336059|LOC100336059:XM_002697809:433_cdna Constitutive 0 NULL GeneID:100336059 24 GENE LOC100336059 NULL hypothetical protein LOC100336059 EMBV3_42454 GGACCACGTGATGCAAACACTCTGCCAAAGATTGAGCAATCACAGCATCTGTTCCAAGCA Gene GeneID:507386|ARFIP1:NM_001083650:11_cdna UTR3_Alt 4 NULL GeneID:507386 17 GENE ARFIP1 MGC151527 ADP-ribosylation factor interacting protein 1 EMBV3_07420 CCGGTCCGCCATCAACGAGGTGGTGACAAGAGAATACACCATCAACATTCACAAGCGCAT Gene GeneID:534279|RPL31:NM_001025341:77_cdna Constitutive 0 NULL GeneID:534279 11 GENE RPL31 NULL ribosomal protein L31 EMBV3_23595 ATACCTGGGCTGTTTGCGGTACTGGCGATTATAAGTGAAGCTGCTATGGTTATTCTTAAC Gene BVT0102_028081 + 0 NULL GK000002.2:17731391-17791924 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107786 1 XLOC_063696 NonCoding TCONS_00107786 XLOC_063696 NonCoding NonCoding - 2:17733766-17738441 - TSS79407 4675 2 TCONS_00107786_8 88 0.224385026737968 1 0 0.000285211203784842 0.000423432245775157 0.000154398273696943 0.000103024716174212 3.69628777057325e-05 0.000237960380644095 0.000138463962817459 0.000101214412299114 0.000145144807645625 1.76021344631775e-06 3.91733666955048e-06 0 6.13750380957139e-07 0 0 0.000276827225056779 4.26156421607639e-05 0.000327389307223601 0.000395744119676442 0.000662995740250194 0.000202598151485628 0.000133333871219401 0.000129516062881711 0.000172128822658194 0.000428305141359763 0.000473213441267031 0.000322096393088279 0.000102729186401679 2.59604355913476e-05 6.43021616563452e-05 NM_001083717.1 CBR4 Bos taurus carbonyl reductase 4 (CBR4), mRNA. 9e-54 217 84.16 0.0427807486631016 NM_178123.4 SESTD1 Homo sapiens SEC14 and spectrin domains 1 (SESTD1), mRNA. 0.0 1020 70.41 0.49048128342246 0 noncoding AGGTCACAAAGAGGTAGACATGATTGAAGCGACTTAGCACACATGCTACAACTTTCACATTATCTTAACTCATCTCAGGGAGTTATTGAATGTTAATTAGACTAGCTTAATTTTTTGTTTTGCTTCGAGTTTTTCTTTTGTCTTCATGTCATAAATTTGCTCCTGTGTAAGCTAAGTATCTTATGGACAGTTTAGGCATCTATTCACACATGTCTAACCCAGCAAAATTATGATGTGAAGATGATAACTTCCTTTCAGATAAAATTGACGGTATTCCCAGTCTTCATTGTTGGTCACCTGATTCTACCATGGTAACTCATGGGTGATAAAATTGCGTAGTCTGCCAGCTAAGATGTCGGCAGTTCTAGGCTTCCTTGCTCTGTAGAGAATTGGATACTTCTCTCACCTTATAGGTCTTTATGTTGGCCAGTGCTCCGAAGCATTACCTGGTATTAACGTGCTCGTTTCACTATCAATTGATGTGTGGGGTGTGCTATCCAGCGTATTATTGTTAGTGCATTCTCCTTAATGTGAATATGGCAGTTATTTTTCTGATAGTGCTGAGTAAATCATACATAAGCCCACTGTGACAAATGGCGTGATTGTGAGATTAGTTGAACCTGTCTCTGTACTGGCTTTGTTTGAAGAAAGACTTCGTAATTCTCTACTACATTTTAAGTTCCTTGCCAGAAAGATTGGAAATTACTATGTACTTTTCCCACCCCCACAGGACCATGGTAAAATACTGTGATTACTAAAAACTGAACATAACTGTAGTTGTTAAAATCGTCCCCATTCTTGAGTCTATTGAAAACGCTATAGGAAGTTAACATTGGTAAATATCAGTGACAAGAGATGTATGTTTGGGATATATTTTTTTAAACCTCAAAAGGAAAAATTATCTAGGATTAAGAAGGTGGATTAGAATATAGCTGACCAGTTAACCTAATTAGCAGAACTTAGCTAGAGCTAACTTTCAGTTCAAAAAATAAAGAGCTCCAGTTGGATGTGGAAAATTTCGCTCCTGGTATATAGAGGGGCAACAGTCACTTTGATGAGGGAAAAGGAAGTGCAGGTTTAACTCCTGACATTAGTTGACTTATGTGTGTGCTGCAGAAAACCTAGGTTTAGCCAAGAAACATAAATAATGGCAAGAATAGTACAGGAAAGGTTGTAAACTTAGGCTAAAATAAGAACTCTAGTGAATATAATGAAAAGAGGTAGAGTTTAAATACTTTAGAATCTGGCTTTGGCATTTACTAACCTGGGTGAAAAATCATTAAACTTCTCTGAACCTGTAAAATAGAGAAATCATACCAAGTAATTTTAAGAATGAAGTATAATTATGTTAAAAGTCTGTTGAAAAATAAAATATTATTCAAAATAGAAGGATTATTATTTTTCCAGAATAGAATGGGGAGCATTCTTTAATCGTGTTCTTGTCCCAAGCACGGGGTCTTGGGAGAAAGGGAACCTTGTCTGCTCACCTCCCAACACTCCCATTTCCCCTCCATTCGGTGTACTGAAAATACTGAGGGTGGGGCCAGTGGGCTCTGCAGTAAACAGCAAGATTTTTAAACCTGACAAATTAACTCTGTTGTGGCAGGATGATAGGCCAGCCAGATGGAGGACACGGGAGGAGTATCCTCTACTTTGAGGTTAACAGGATGAATACAAGTCCATTGAAAAGTAAGAAAGTAAGTAAAAGTCCTACTCATGATCTTAGTGAGTCAGCACCAACCTGTAGAAACAGGAGCATGAATCTGACCACCATTGGTGCTGTTATGGTTAGAGAAGAGCAATCCTGGTAAACTTGGGCAGTGATAATAAGAGAAAAGGACTACAATAGAGGCTGATGGAGCTACGGGTGCTTCATGAAACAGCATAAGTACATGGGAATGTTTAATACTGAAAAAGGCTCATAGATACAATGCTGAGTAACGTGACTGTAATGTTTTAAAGCAGACTTGAAAACATGACAAAACTAGTCCGTGTGCTTGAGGAAAAGGCAGAGCCTGTGCTAGAACATGAACTTAGAGATCACAGGAAGAGCCAGAACTGTACTACACACTGAAAGCAGTAGGCAAAATTATAAAAGAATCAAGGTTAGAAAATCTTTAGGAGGCAACACATAATACCATAGGTAATTATACAGAAATTCTTGTGCTGGGTACTCAGTCGCGAAGTCATGTCCAACTCTTTGTGACCCTTTGGACTGTTGGCTGCCAGGCTCCTCTGTCCATGGAATTTCCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTTCCCAGGGAATCTTCCTGACCAGGGATCAAACCCGTGACTCCTGTTTCTCCTGCATTGGCAGGTGGATTCTTTACCACTGAGTCACCATAACTAAAAATAGTTACCAGCTTTCAATATTAGAGTAGCATTGTTATGAATCTTAAGTCAGTCTTGTGGAATACTAAATATTTCTGACAAAAGGCTATAGGAGTCTGAAGCCATTCTTATCCTCTCAGTGTCCCCTTAGAAGTATTTACAAGTCAGATGCCATCTCTAGATGGTGTCTCTAAATGTGTCATTCCTGGAGAGACAGGAGAATGACTCCGGTGTCCTTCCACTTGACTGGCGGGGACCTATTCACTATGATCAAGCCTCACATTGTGTTTTGGGTCTACACATTGTTTCTATTATAGTTACTCTGGTTCTTTTTCAGTTTTAAAAATCAGTAAAAAAAAAAATGTGCTTGATTTTTCCCTTTAGAATGTTTTTTTCATCTTAACTCTGTTAGTCTACACAACCAACAAATTTGCTCAAAATAACCATCAATGCATGTAAGTGTGAGGACATGAAAAATCACCTTGACAATTTTAAGTCAGCACAGATCCAAGAACTGATTGCTTACCTCACACAGGAATATCCTTTCACACGCTCTTAAGTTTCTAAGTTGACACTGTTGGGAAGAATTTATGATTATGAAATCAGTAATGAAATTCTCAGCAGCATTATTTTGGAAGCAGTGTGCCCTGAATTTTTTCCCCAATATTTTATTATAAAATTTTTCAAGCATATAAAAAAGTTAAAATTTTATAGTATACTCACCACCTAGATGCTAGTTAGCATTAACTGTGCTTTGTCACATATCTATCCATCCATCAGTTCACCAATTCAGATTGTTTCTGATGCATTTTAAATTGAAGAAATCTACACACTTCCTGCTGAATACTTCAGTCATTAGCTAGAATTCGGTATTTGCTTGCAATTTTACTTTTATTTAAAATTAGCATACAACGAATGTGGAAGTCTTAAATGTGTATCTGCTGGGTTTTGGTAAATGCATACAGTGCTGTCAAAATATAAAATGCTATTAAAACAATTCCCATGGTGCCATTTCCAGTCAGTCCTCTACAACCACATCCTCCTCCACAGGCAGCCTCTATTCTTTGTTCTACCTTAAATCGGATCTCGTGTTCTAGATCTTTGTGTAAATAGAGCCGCACAGCATGTATCTTTCTTGAAGGCTTCTTCACTTACCATGTTTTAGAGATTTATCCATGTGGTTGTGTGTATTAATAGTTAATTCCTTTTTTATTGCTGAGTAGTATTCCATTGTATGACTGTATTACAGTTTATTTATTCATTTTCCTATTTATAAATACCTGGGCTGTTTGCAGTACTGGCGATTATAAGTGAAGCTGCTATGGTTATTCTTAACATAAGTCTTATGTGAACATAGGCTTTCATCTCTCTCGGGTGAATACCTAGGATTAGAGTTTCTGTGTCATACGGTAGTTTTGAAAGAAACTTGCATATCTTTTTTTCAATGTGGGTGTGCTGTGTCCTGGATTTTCATATATTTTGAGTGTGTAGAAAACTGTAAACTATTTTTATGACCCATAATCTGAAGTATTAGAAGTGGATTTGGAATAGAAATGGCATTCTTCACAGTTGGCAGTTAGTGTTGAAGGACACAAATGCCTGTCTGCCCAAAACAGCTCCCCAAATGGTACCTATCCCTGAAATTTTAGTGTAACTCCTTGAATGATTAAAATACTTAGCCAAGCATGGTGATAATATTAGCTAGAAGAAACAGCATTGGTTTGTTACATTACTAACTTTTGCCACCCGTTTTCAGTAGGCAAAATAAGACTGATAATTGAACAGAAAAGATTCATTCTGTTCAATGGGGATGGAAGGGGTATTAAAGAACATGTCCTACTGGTTAGTCCCAGGTACCGCAGCGTGAAGAGAAGCATCTGGATGGAAAATCCCCCAAACGGTGGTCAAGAAACCAGAAAACGGGGTGGGGAGAATTCTACCTCACAATTGTGCTTAGGAAGTAGATATGTTTTTGCAGGACATTTTAGCCTTTACAAATCAAATCGTATTTTCAATATTGTCTTTTTATTCAATACCACCCAGCTACAGTTATTTCGCACCCTTAGTGACTTTTATCTACTTTGTCTTACCCTTCCCACCTGTTCTGTTACATACAGCAGTTACCTGTCTAAGCCTGTAAAATTATAATCATATGTACGTTTCCAGTGCTTGTGTTCACAGATATTTATGTATGGTTCATTCAGTCTTTCTTATTTGATTTTTAAGGGCTGGGATATTTGGCTTCTACTGTAAATCCTAATAATGTTCCACACACATTGTAAATGCAATAAAGGTGTTAAAAACTAATTAAT TCONS_00101718 TCONS_00101721 TCONS_00101722 TCONS_00101724 TCONS_00101725 . 3' 55 TCONS_00101718 TCONS_00101721 TCONS_00101722 TCONS_00101724 TCONS_00101725 . 3' 4729 EMBV3_31285 TCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCG Gene BVT0102_217358 + 0 NULL GK000007.2:107164594-109046034 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206254 TCONS_00218368 TCONS_00152803 TCONS_00011730 TCONS_00018628 TCONS_00057018 TCONS_00147884 TCONS_00034471 TCONS_00122090 TCONS_00138406 TCONS_00087333 TCONS_00206255 11 XLOC_124865 XLOC_131688 XLOC_092568 XLOC_007281 XLOC_009312 XLOC_034820 XLOC_089771 XLOC_020687 XLOC_073646 XLOC_084614 XLOC_052448 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_38681 GTATTCCAACCATTCTGTCCCAAGAGAACAACCATACAGACTCTCAAAGATCAGCCCTGA Gene GeneID:281766|FCGR3:NM_001077402:189_cdna Constitutive 2 NULL GeneID:281766 3 GENE FCGR3 CD16 FCGR3@ FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a) EMBV3_23513 AATTCAGCTTGCGGGGGCTGCCAGGGTTGTCGCCTGGACAGATGATCGTATTCTAAATTA Gene GeneID:510840|ANKRD39:NM_001075471:44_cdna Constitutive 2 NULL GeneID:510840 11 GENE ANKRD39 MGC142444 ankyrin repeat domain 39 EMBV3_39492 TGCTGGCACTGGTCATGTACATCAGGAAGAAACAGTCACTACGTTCTCCGGCAGACATCA Gene GeneID:783105|LOC783105:XM_002691139:151_cdna Constitutive 0 NULL GeneID:783105 11 GENE LOC783105 NULL similar to hCG1807576 EMBV3_18482 CATCTTCAGGGGCATTATTTTCTGCTGGTTCTCAGCCTGCACCACCTACTTTTGGGACAG Gene GeneID:513270|NUP153:XM_002697577:431_cdna UTR3_Alt 2 NULL GeneID:513270 23 GENE NUP153 NULL nucleoporin 153kDa EMBV3_04059 CCGTGATCACAGAAAACAGCAACAACCCAAGTGCTCTCTCGATGTTGGTAAACATTTTAC Gene GeneID:533188|CD2AP:XM_002697272:32_cdna UTR3_Alt 2 NULL GeneID:533188 23 GENE CD2AP NULL CD2-associated protein EMBV3_11508 GAATCTATCCTTCATAAGTGCATCAAAACATCCTTAATGGATCAGTACTTTGCCCGAATG Variant GeneID:286870|EIF4G2:NM_001099859:51_cdna 870^980 1 EMBV3_16184 GeneID:286870 15 GENE EIF4G2 NULL eukaryotic translation initiation factor 4 gamma, 2 EMBV3_22915 CTGGAACTCCGGATTGCTGTTATTTGGGGACTTCCTGGTGCTGTTCAAGTCTGAATATAC Gene BVV0102_292220 + 0 NULL GK000007.2:77303911-77321512 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40180 TGGTCATCTCACTGTGGAATAACATCACACTCATTCTTGGACTCGGTGCCCCCAAAATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02517 CCCAATCTTCAGGACCCATTTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTC Gene BVV0102_279431 - 1 EMBV3_39328 GK000004.2:107972238-107987836 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00200933 TCONS_00238445 TCONS_00010779 TCONS_00253025 TCONS_00062753 TCONS_00199803 TCONS_00115687 TCONS_00152859 TCONS_00210177 TCONS_00199063 TCONS_00176249 TCONS_00165813 TCONS_00186108 TCONS_00248863 TCONS_00251760 TCONS_00023615 TCONS_00252354 TCONS_00009883 TCONS_00135547 TCONS_00010052 TCONS_00239219 TCONS_00251930 TCONS_00218899 TCONS_00175545 TCONS_00040583 TCONS_00055867 TCONS_00021596 TCONS_00040195 TCONS_00065249 TCONS_00157488 TCONS_00123618 TCONS_00238457 TCONS_00032143 TCONS_00238357 TCONS_00152628 TCONS_00072815 TCONS_00206861 TCONS_00250580 TCONS_00185582 TCONS_00062743 TCONS_00156997 TCONS_00253665 TCONS_00019962 TCONS_00133066 TCONS_00020724 TCONS_00063180 TCONS_00245928 TCONS_00153219 TCONS_00185807 TCONS_00252056 TCONS_00162783 TCONS_00030942 TCONS_00088087 TCONS_00124845 TCONS_00223462 TCONS_00124584 TCONS_00142124 TCONS_00157440 TCONS_00006827 TCONS_00189890 TCONS_00022065 TCONS_00007719 TCONS_00201733 TCONS_00249012 TCONS_00019198 TCONS_00031911 TCONS_00066285 TCONS_00179470 TCONS_00222115 TCONS_00056147 TCONS_00054954 TCONS_00154085 TCONS_00070840 TCONS_00063487 TCONS_00251915 TCONS_00030941 TCONS_00047158 TCONS_00050046 TCONS_00124110 TCONS_00249570 TCONS_00240475 TCONS_00048821 83 XLOC_006139 XLOC_131641 XLOC_122583 XLOC_145112 XLOC_006330 XLOC_155966 XLOC_037480 XLOC_121455 XLOC_069856 XLOC_092624 XLOC_128687 XLOC_120716 XLOC_106028 XLOC_100653 XLOC_112161 XLOC_151806 XLOC_154701 XLOC_014282 XLOC_155295 XLOC_005436 XLOC_081770 XLOC_005604 XLOC_145885 XLOC_154871 XLOC_132218 XLOC_105326 XLOC_024399 XLOC_033675 XLOC_012269 XLOC_024012 XLOC_039971 XLOC_095943 XLOC_075170 XLOC_145124 XLOC_018386 XLOC_145024 XLOC_092393 XLOC_044583 XLOC_125381 XLOC_153523 XLOC_111635 XLOC_037470 XLOC_095457 XLOC_156604 XLOC_010640 XLOC_080989 XLOC_011399 XLOC_037907 XLOC_150855 XLOC_092984 XLOC_111860 XLOC_154997 XLOC_099664 XLOC_017192 XLOC_052874 XLOC_076388 XLOC_136762 XLOC_076128 XLOC_086549 XLOC_095895 XLOC_002389 XLOC_115927 XLOC_012736 XLOC_003279 XLOC_123378 XLOC_151955 XLOC_009878 XLOC_018156 XLOC_040999 XLOC_109243 XLOC_135424 XLOC_033950 XLOC_032763 XLOC_093846 XLOC_042617 XLOC_038214 XLOC_154856 XLOC_027294 XLOC_030177 XLOC_075662 XLOC_152513 XLOC_147139 XLOC_028952 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_02074 AGAAATCATGCAAAGACCTCCACCTTTCAAGCCACCTCCACCTCCCATCAAGTACACCTG Gene GeneID:509578|CD96:NM_001035072:56_cdna Constitutive 0 NULL GeneID:509578 1 GENE CD96 MGC127696 TACTILE CD96 molecule EMBV3_24614 AACGGCTTCCACGACGCGTTCATCGAGGAGGATAAGATCTGTGACCAGATCAGTGATGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36520 AAGACCTCTGCTGTCTGAGAACACCCTCCCCCCAGCCCTTCTGCACCTGTTAGAATAATA Gene BVT0102_097879 + 0 NULL GK000016.2:62845820-62868731 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067930 TCONS_00069893 TCONS_00069894 TCONS_00067932 TCONS_00069895 TCONS_00067931 2 XLOC_041559 XLOC_042080 Coding TCONS_00069893 XLOC_042080 NonCoding NonCoding - 16:62854688-62857664 - TSS52014 2629 1 TCONS_00069893_4 108 0.151768733358692 2 0.116974789915966 4.4279043163095e-05 2.99884439866374e-15 0.000193554540708949 2.48590172182433e-05 6.0912693614155e-66 9.18568124621433e-20 7.98026826675122e-05 1.16624107584794e-14 3.3930921203956e-24 0 0 4.2298318300311e-12 2.66475322317397e-05 1.14669060086817e-19 0.000440419666329379 0 0 0 0.000615170700751964 0.0004110086357512 2.11130086228829e-05 0 0 0 1.62363123117049e-05 4.75159879326924e-05 9.29786807176843e-20 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 4e-62 244 88.21 0.0734119437048307 0 noncoding 0 0 0 0 0.381952590318629 0.399090684559471 -0.143296366129353 0.465918905158567 AGTGAGGAATGGACAGGAGGCGGGGTTTGAATGGGCAGAATCTGGCACCAGGGAGGAGATACAGAGAAATACAAGTGGCAGATATGTCCACTGATACACGATACATTCATGGACTAGTAAATGTTTCTGGCTGTAAGATGATTTCGTTTGCTTAACAAAAGCACCTGGAATGTATCACGAGGAGAGCCAGTACACCGTTTCCTGAACACGGAGAGGCACCGGTGCACGCGACGTAGAGTTCTGAGAACACCAGTGAATGGCGCATCGTCCCGACCATGGCCGGGATTAGAATAGTGATTGTGACCCTCCTCTTGCATACTCAGATATCTAAGGCTCCCCCGAGGGCCCTGGGGACACAGAATCGCAGCCCCAAGTGAGCTTGACTTTTACACCAAGGGTTAAACTGTGTATTTATATTGCTGGGGTGGTTGTACTGGCCCAAGTAGCAAGAAATTTGTGTTCTGTCGGGAGGGCAGGAACGGGGGTGTTCAGAAAGGGAAGTGTGTGCTGTGTGGGGTACAGGATGTCCCCTGCTCGAGGCTGTGAGCAGGATAGTCACGCTGTTTGTTGCGGCAGGAAGGGAGAAGCCTAGCACTGCTCTGCCCGTGTCCTCCAGCCCAGGGTCTTGAAAAAGCTACTCTTGCCCAGTGATGGGCTCCAGTAAGCCCCGCCAACCCCTACCTGCTGCTCAATTGTCAGGGCAAGGATTTAGTCCCTGAAGGTACCAGTGAGCCCTGTGAGCTGGCTGGTGTTGCAGATGGCCGGGCACCTTCCCTGTGGTGGCTTCCCAGGCCCCCAGGGTCCAACCAGTGTGGACAAGACCTCTGCTGTCTGAGAACACCCTCCCCCCAGCCCTTCTGCACCTGTTAGAATAATACCTGCCAACAGAGGGCAAGTCCTTCCGGGGTTCCAGCATCTTCATGACAACAACACCCCTGACAATACACATTCCTGCCCTTCCTTGTGTGCCCCCAGTTGTCCTAGCCACTCGGTCATTGCGATCCTCTTGGGGGGCTCTGAGAAGGCATTCGAGCACTGGATTCTCACTAGCTGTGCTCTCCAAAGGCGATCTCATTCACTAGCGGCCCCCGCGCTGGAGAGCTTGGGCCAGTTACTCAACCGCAATAAAATGGAGAGAGGAACACTTGCCTCTCATGATTACAAGTGAAATCACTGTGCTCAGGATTTGGCCCTTAACAGGGCTTCCCAGGTGGCGCTAGTGGTAAAGAACCCGCCTACCAATGCAGGAGATGTAAGAGATGCAGGTTTGATCCCTGGGCTGGGAAGATCCCCTGGAGGAGGGCACGGCCACCCCTCCAGTATTCTTGCCTGGAGAATCCCAAAAACAGAGGAGCCTGGTGGGCTACCATCCATGGCATCACAGAGACTCAGAAATGGTAATAAACGTTGTTAACAAGTCCTCAGGCCCCTCAGTAAGGAAACTGTCTTGTTTGCCATTATGCTTCCAGCTTCAAGTGTAGGACCCTGTACATTATGGGGTCTTTGGGAATGTATGTTACATAAAGGGATGAAGGAGCAACTGAGTTTGTAAGTAATCCACTGCTACAGCCTGAGACCTGGAGGAACACACCCTCCCAGCAGCAGCTGCTCCCGGGGTGGCCAGCGTGGCCCTGTCAGGCCTGGTTAGGCTGCCGGGCCTGTTATCAGTGTGGTCACCGGCTGGGGACTCGAGCTAACTCAGCTGTCAGGGCCCCACTTACCTCTCACCCCTAATCGTCCCTGGCTCTTTATGTACTTCCTGCTCTCCCATGGCACTGTTTGGACTTTATTATGTGGACCACGTGGTCCCTGTAATGAGAGTTAGAAGAAGAAAGCCTGGGATAACAGCCCAGACCCCAAGACACAGGAAAAGCCACGCGAGTCTCCCGCATCAGCGCGGCTTGCTGGGACGAGGCTGGGGGTTCCCGCCCGCTGGTCCTCAGGGTGCTGCCCTAGACCCAGGGTGCATGCTGTTGCTTCCCTTCTATCCAAGTCCCGGCCCCCCTTTCAGGCCACCTCAGGCATCACAGGACCAGATCCTCAGGCAGGAAGCAGCTGAGGGGACTTCTAGCCCATTGCCTGCCCTGCAGACTTAAGTCTGTGGGCCCTGCGGGGCAGGCATCTGGGGGTTTCTGTATGGACCCAGCAGGTGTCACGGGCTGGCTCTTCAGAAGCAGCCAGGACCACCTCCAGGTAGTTCTGCCCAGGATGATCCCTTCCCACCAAGTTTTGCTTTTCAGTAGGTTTAGTTGAAAGTGTAATTTTGCTAGTGTGTGTGTTACATATGCTTTATAGTTAGAGCCTAAATTATTGTAAATAGTTACAAAATTACCATTTGGAGTGACTTGCTTTTTCACCATTTATTTAAACTACAGTGATGAGAGGTGATCTCTAAAATTCACAATTCAATCTTGGCTTTTTCAAAGTGGGCTGTGATTTTTAACTGAATTTTAGATTGTTGACTATTTCCTAAAAAACACAAAAATGAATTGCTCTCAAAAATAAGCTGCCACTCACGTCCCTGACTGTACTAAGCCCCAGTTAGCCTCCCCTCCCTACTCCCTCATTCTCCCTTTAAAATGCCCTTTCACCTCTACAAAATCCAATTTGAGTTCTGTTCATGATGGAC TCONS_00067931 r 5' 0 TCONS_00067931 r 5' 0 EMBV3_26116 GACAATGGAGGTACAAAGAATACAGATTAAACGTATAGTGCTTTAAAACCACAGTTGTGC Gene BVV0102_224780 - 1 EMBV3_36036 GK000002.2:34163052-34172503 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108645 1 XLOC_064550 NonCoding TCONS_00108645 XLOC_064550 NonCoding NonCoding - 2:34168905-34169751 - TSS80266 846 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000374632705732662 0 0.00177949506070585 0 0 0 8.77147557928986e-06 0 7.92654927168606e-05 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.158574253620391 0.531815695115687 -0.009301167813038 0.863420656013007 ACTGTGGTTTTAAAGCACTATACGTTTAATCTGTATTCTTTGTACCTCCATTGTCTGTATTTTAATGCTGTTTTTGAGTTGAAAATAATCAAATAATTATAACTGCTAGCATTTAATCTGTATTTTTAAATACTGACAATATATTGTTTGAGTATTTGAGAAAATCCCACGTAATTCCATCATTTTTGTGTTATTCAGGAGTACAATTCAAAGATCTGTAATCTTATAATTAACTGCTTTACATAGTTTCATCAAAATGGCCCTATAATTACAATAGCATTGAAATAATATGGTACTCTCCTAACAAATACTAAGGAAATAGATAAAAATATTGGGGAATCCCTAGTTTTTAATCTGGGAACCTGCCAACTTTAAAGGCAAATTACCTATTTTTAGCTGAAGTTTATGTTCTATAGTTTTGATAGGAATATGTATACAAGAGTGTTTGCTGGTTAAATAATACATTTCAAACAGTAATGTGTGTAATTACTGGAAAATGTCAGTCATCTGATACAAAGAATCTTGCTCACATCAGTTAAGTAGTAAGTACCTTGGAATGCTTTAAACATAACGAAACAATCTACCAAAACACGTATATTTCCTAGTCTTTATGCACATAATGTAGCATGAAATCATGATGCTTTTGAAATACTCTGTGCAGAAATATTTATTTTTTAGCAAATATTTTCTTCAGATTGGTATGTGATATTGACAATGTAATCTACTTGCACAACTAGTTTTGCAATAACCATCCACAAATAACTGTAAATAAGAAAACTGTAAATTTCATGTAAAAATGATTGCAAAATTTTGGTAGCTAAAAGTGTACAAGTTGTATTGAAAATA TCONS_00104981 TCONS_00104982 TCONS_00104983 . 3' 2710 TCONS_00104981 TCONS_00104982 TCONS_00104983 . 3' 3555 EMBV3_08120 AAGGAGAAACTCTAAACGGGATTATGCTGGGGCCCAGTCATATATGCGCAGCTAGACCAC Variant GeneID:539387|MPZL1:NM_001076158:5_cdna 718^820 3 EMBV3_25195 GeneID:539387 3 GENE MPZL1 PZR myelin protein zero-like 1 EMBV3_21348 CTGTCCAGCTACTGGAAGGAGCACCACTTCAAGGGCATCGCCCTGGTGGAGAAGGCCCTT Gene GeneID:788425|AKR7A3:XM_002685792:667_cdna Constitutive 0 NULL GeneID:788425 2 GENE AKR7A3 AKR7A2 aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) EMBV3_10331 AGCAAGTACAAGGTTGAGGTTCTCTATGAGGACGAGCCGCTGAAGGAATACTACACCCTC Gene GeneID:505147|PCGF2:NM_001144106:56_cdna UTR3_Alt 2 NULL GeneID:505147 19 GENE PCGF2 ZNF144 polycomb group ring finger 2 EMBV3_34748 GTGGAGAACAGCATGATCATCAATGTGCTGGGTCTACAAGAACAGCGAGGAACTTCGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06443 CCTATACTCTTCAGTTTACAACGTGTGCTGCTCGTTCTTGGCCTGTTCTTCACTGGCCTC Gene GeneID:615890|GDPD1:NM_001076400:57_cdna Constitutive 1 NULL GeneID:615890 19 GENE GDPD1 MGC134023 glycerophosphodiester phosphodiesterase domain containing 1 EMBV3_22257 GCACACAGAATCCACTGCTAATACAATCTCTCAGAAGTGCCCCCATTTTACAAAAACTTC Gene GeneID:513237|SBDS:NM_001034439:314_cdna UTR3_Alt 2 NULL GeneID:513237 25 GENE SBDS MGC129036 Shwachman-Bodian-Diamond syndrome EMBV3_43094 AGCTAAACCTTGAAAATCAGTGTCCCCGAGTCACGTGTGCTGCAAATAGCCTTCCTGACC Gene GeneID:615950|SMS:NM_001035471:73_cdna Constitutive 0 NULL GeneID:615950 X GENE SMS MGC128306 spermine synthase EMBV3_00393 TGCATCATTGGACCTACTGAAGGAGTTTCAGTATCCAGCTTCATCTAGGTGGTCATGAAC Gene GeneID:533520|OCIAD1:NM_001015648:110_cdna Constitutive 2 NULL GeneID:533520 6 GENE OCIAD1 NULL OCIA domain containing 1 EMBV3_12525 TAGGAAGAGAGGTCCGAAACCCAAGCGGCTTCTGCTGCAGCGGCTGTACAGCATGGACCT Gene GeneID:525770|CBX7:XM_002687926:145_cdna Constitutive 1 NULL GeneID:525770 5 GENE CBX7 NULL chromobox homolog 7 EMBV3_37474 GGTATCTCATTGGAATTGTGAGCTGGGGAGATAACTGTGGTCAAAGGAACAAACCTGGAG Gene GeneID:517049|TMPRSS11A:XM_002688314:160_cdna Constitutive 0 NULL GeneID:517049 6 GENE TMPRSS11A NULL transmembrane protease, serine 11A EMBV3_11461 CTACTCAGAAGAGCAGAAGGCATACTTTTCCACTCCTCCTGCCCAACGCTTGGCCTTACT Gene GeneID:513433|MMACHC:NM_001015588:158_cdna Constitutive 0 NULL GeneID:513433 3 GENE MMACHC DKFZp564I122 MGC134307 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria EMBV3_08870 GCATAAGAAAAAGAAGCAACCTGGCACGTGGACCCCTGTAGTCCCCCAACCGGAAAAGAA Gene GeneID:786345|VSIG10L:XM_002695233:12_cdna Constitutive 0 NULL GeneID:786345 18 GENE VSIG10L NULL V-set and immunoglobulin domain containing 10 like EMBV3_13435 CGATCCTTCGAGAACTGAAGTACAGGATTGGCATTCAATCAGCAAAGCTACTTCGGCAGC Gene GeneID:100297221|LOC100297221:XM_002687651:833_cdna Constitutive 0 NULL GeneID:100297221 5 GENE LOC100297221 NULL hypothetical protein LOC100297221 EMBV3_31007 GCATCAGCATCTTCCAGGTTCTAACCCACACAATTCTGGTCTCCTTTGGGATCTTGTGCC Gene BVV0102_134053 + 0 NULL GK000007.2:3627735-3631054 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211491 TCONS_00211490 TCONS_00211493 1 XLOC_129883 Coding TCONS_00211493 XLOC_129883 Coding Coding LPAR2 7:3624278-3629762 = TSS158900 3886 1 TCONS_00211493_2 351 0.042717447246526 4 0.291993434251322 1.04119431503307e-16 0.000642561963246937 1.46059792694779e-11 4.25119216914776e-05 6.04841578834433e-08 1.04511820738266e-05 0.000206783983481425 0.000278528386488014 1.1103353472442e-11 6.03375708945868e-05 2.14809374985582e-11 5.40714583231817e-21 4.13845496751524e-06 0.000174589717784444 1.92861239858651e-05 0.00242532595313554 5.66325164337325e-08 9.71319349217229e-08 1.51377072237605e-05 6.96770897862149e-05 0.000305137851659584 2.58404191031272e-08 6.34599949617942e-10 2.07624998929598e-09 4.57278226905048e-05 0.000193243199697766 3.10347378422165e-05 1.84485928220519e-11 0.000154424121849779 2.16156175316824e-08 XM_005208442.1 LPAR2 PREDICTED: Bos taurus lysophosphatidic acid receptor 2 (LPAR2), 0.0 6603 100.00 0.941842511580031 NM_004720.5 LPAR2 Homo sapiens lysophosphatidic acid receptor 2 (LPAR2), mRNA. 0.0 1599 81.80 0.422027792074112 TCONS_00211493_2 sp|Q9HBW0|LPAR2_HUMAN LPAR2_HUMAN Lysophosphatidic acid receptor 2; 0.0 645 94.02 0.997150997150997 2 coding 0 0 1 0 -0.0565765835879735 0.693726471699842 0.00505199690743152 0.927782024796375 GGTCGCCCGGCCATGGGTCTCGGGCGCAGGGCCGCCCAGTCTGCGGCGTGACGGGCGGCTCAGAGGCCGCCAGCGTCTTCACTCCCACCCGGAGCGGCCCGACGCACCGCCTGCTTCGGGAGCACTCGCGCGCAAAGCAAAGCCCGCCGCCCAACTCATGGAGCTGCCTCACTGTCCAATCTGATCGCCCAGATCACCACACCCCAGCACCGACCTCCTGCCAGATGGTCACCATGGGCCAGTGCTACTACAATGAGACCATCGGCTTCTTCTACAACAACAGTGGCAAGGAGCTCAGCTCCCACTGGCGGCCCAAAGATCTGGTCGTGGTGGCGCTGGGCCTGACTGTCAGCGTGCTGGTGCTTCTGACCAACCTGCTGGTCATCGCAGCCATCGCCTCCAATCGCCGCTTCCACCAACCCATTTACTACCTGCTCGGCAACCTGGCCGCAGCTGACCTCTTTGCCGGTGTGGCCTACCTCTTCCTCATGTTCCACACAGGCCCGCGCACAGCCCGGCTGTCACTCCAGGGCTGGTTCGTGCGGCAGGGCCTGTTGGACACGAGCCTGACGGCCTCCGTGGCCACACTTCTGGCCATTGCCGTGGAGCGGCACCGCAGTGTGATGGCCGTCCAGCTGCACAGCCGCCTGCCCCCAGGCCGGGTCATCATGCTGATTGTGGGCGTGTGGGTGGCCGCGCTGGGGCTGGGGCTGCTGCCCGCCCACTCCTGGCACTGCCTCTGTGCCCTGGACCGCTGCTCTCGCATGGCCCCCCTGCTCAGCCGCTCCTACCTCGCCGTCTGGGCGCTGTCCAGTCTGCTCGTCTTCCTGCTCATGGTGGCTGTCTACACCCGCATCTTCTTCTATGTGAGGCGGCGAGTGCAGCGCATGGCTGAGCATGTCAGCTGCCACCCCCGCTACCGTGAAACAACGCTGAACCTGGTCAAAACTGTTGTCATCATCCTAGGGGCATTTGTGGTCTGCTGGACGCCGGGCCAGGTGGTGCTGCTCCTGGATGGTCTGGGCTGCAAGTCCTGCAACGTCCTGGCAGTGGAGAAGTATTTCCTACTCTTAGCCGAGGCCAACTCGCTGGTCAACGCCGTGGTGTACTCCTGCCGTGATGCTGAGATGCGCCGCACTTTTCGCCGTCTCCTCTGCTGTCGTTGCCTCCGCCCATCTACCCACGAGTCTGTTCGCTACACAGCCTCCACTCCCACAGGCACTGGCATTCGCATCATGCTTCCTGAGAATGGCCATTCCCTGATGGACTCCACCCTTTAGCTAACCTTGGATTTCAGCAGGGTACAGCAAATGCCACATCGCTGCCCCGGGCCACTGTGGATGCACCTGCGGGCCAGACTTAAAGGCAGACCATCAGTCTGACATGGCATGAACCACTGCCAGCCCTACCCAGGCACACAGCTGTGCCTGTCTCTGAGCCTGCGGGTTAGGGTCATCTATGCAACTGGGAGAGAGTTGAATGGGGTGCAAGAATTGGGCTCTGAAGTCATCTCAGGTTGGGGGCTTTTTAACAGACACTTTTCTATTTTTTTTCTGCACATGCCTGGTAACCCCTGTGGACTGCTTTCTTGTCTGTGGTGGTGTAGACGATAAATGTGAGAGAGACGAGGACTCTCGGGCCATGCAGCCCGGGGAAGCAGGGTGACGAGGACGGACTATGGGAGCCCCGTCTGCCTGAGGCTGACTGTTTAGGGGCACAGACGGGAGTGCCAAGTGTGAGCTGGGAAAGGTCTGTGACCCCTTGCAGCCTCCAGGGGTCTTGCCTGTCTCATGAGAACTGAGGCGGTCTACAAGGAGGGCATGATTTAAGGAGTAAACTTTTCTACTCTGAGATCTCCAAAGCCTCTTCTGTTGTCAGCTTGGTCTGTCTGTCCCTGTGTCCCAGAATTGTCCACCTTGGCTCAGACTGAGCTGGAATCCTTCAACATGGCATCTCCTCGGCCCTGTTCTCATTCCCCCTTGGTCTCTTTCCTTTTGTCCTCTGTCTCCTCCACCTGTTCCCCTGCCTCCATCTTGCCACCTGCCTGTCTCCATCCTCTGGAGCCCAGAGTGGTTCCTGGCCTGTGTAAGCCTGCTGCTTGCCCTTTGGTCTGAGTCCAAGTTGTTAATAGTCAGATGTGTCTATCCCATTGCCCACTCTATCACCTACCTATAATAGATGGGCTAGGGGTTGTGGGGTCCATGGACCAGCATGCACGATTTTAAAGTTGCCATTTCTCAAGCTCCTCTGCTGTGCCTGGCACACAGATATGTACTTTACTCTTTGCGACCCCATGGACTGCAACACGTTAAGGCTTCCCTGTCCATCACCAACTTCCAGAGCTTGCTCAACTCATGTCCACTGAGTCAGTGATGCCATCCAACCATTTCATCCTCTGTCCCCTCTTCTCCTCCTGCCCTCTGTTTCCCAGCATCAGGGTACTTTATGTACATTATTTAATTATCATCTGCTTCTTGTGGCAAAGGTATTATACATATTTTTCATATGGGGACAGTGGCCCAAAAAGATTGAGATTTGGCCCATGGTCACATAGCTTCAGAAGGACACAGAGGGGGCTAGAGAGGCCCCTGTAGAAAGGGCTTCAGTTTTCCATAAAGTCTGGAATTGGTCACAAGCTCAGCCCGGCTTTGCCCACTTCCCTCTATGGTCTCAGATGTGCCAGACCCATGATGAACCCCCTCTCAGATGCTCATAGAGGCAATCTGCTAGGCACAGAGTGAACCAGAATCTGGATTCTCTGCTTCCATACCTACCCAGAATTTGAACCCAGGCCTCCCATCAGAGACCAAATTCTTAAACTACTAAAGCATGCATTGCCAAAGAACCAAAAACATGTAGGTCTTTCTACATGGAATGGGGCTGGGTTTCCCTTTGGGAAACTCTCCCGGCCCCACAACAGCTCTGTGAGGAGGCAAGAATAAACTGGGGTGCTAGGTATCCCGGGGTCCAAGGTGGGCAGTGTGGTTCCTTGAGCCTGGGCCCTGAGTTGCCAGAAGTGATGACCTTGGCCAGCGCCTTCTACCACACAGATGAGTACGCAGTCCTTGTCTCCATGGAGCTCCATGCCTGTTGGACAGGAGTATTTGTTCCAGATGCAGAGGCAGTCGATCAATTCCTGTGGGGTGGGAACCACCCCCAGTGGTCTCCAAAGGTAGTTCTGTTTCATGTGCTCTGAGCGGGCTGCTGTTGCATCAGCATCTTCCAGGTTCTAACCCACACAATTCTGGTCTCCTTTGGGATCTTGTGCCGTCAGTTTTTCCCTCCCCTGTAGGTTCTCTCCTGTCTACTAGGTGACCAGGTTTTTTTTGTCTCAGATGGTACTCATAGCTTTCAACCCCCTCCCCCCACCACTATTCTCTGAAGGACACCAAAGTTACCGACCACTTTTCAGGTCTTTCGTGTGGTCACTGCCCACTCTAGTCACTGACATTTCCATGGTCCCCACGTGTTCTAGTACTTCTGTTAACTTCTGTTTCACACCTAATGTGAAAACCATGTAGTGGTTTTCACATTAGATGGTGTTTGCATTTCCTCTCCAACAGTAGTGGGAAGAAGATTCTGAAATGTTCCCCGGAAGTTGAAGTTCCTTTCTGAGCCTGTGTCAGAAATCTGTCCCCAGAGCAAACAGGCTCTAGGAGGTCCCATGACTTTGGAGAAGTGATTTATGTCCAATAATAAATTCTTTTCTCTCACACAAGAATCCTCCGATGGTGGGAGTCCTAACAGCTAGAAACAAAGGCCTGTGAAGATTCACTCTGATTTGGGGATGCATCACAGGGTAGGTCCTCAGAAAGCATCCTTCCCGTGCTAGCGGAATGCTGTAGAGCGAAAGAATGAATAAACAAGCAAGGTCACTCTTAAGCTG EMBV3_39931 CATTAGAATGGCACTCCTTGGTGCTTCTGAATAGGTATCTGAGATCTCCCAGGGACTCAC Gene BVV0102_043230 - 0 NULL GK000029.2:50863487-50896192 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056222 TCONS_00169477 TCONS_00240924 TCONS_00169478 TCONS_00132043 TCONS_00169645 TCONS_00088693 TCONS_00168148 TCONS_00187485 TCONS_00226268 TCONS_00169644 TCONS_00132044 TCONS_00221594 TCONS_00169479 TCONS_00226267 TCONS_00238548 TCONS_00178138 12 XLOC_034025 XLOC_103372 XLOC_147588 XLOC_080693 XLOC_103408 XLOC_053479 XLOC_102983 XLOC_113530 XLOC_137960 XLOC_134908 XLOC_145215 XLOC_107911 Coding TCONS_00169644 XLOC_103408 NonCoding Coding - 3:37339587-37347876 - TSS126957 3104 2 TCONS_00169644_5 100 0.830863402061856 2 0.625723938223938 6.22775982933053e-05 1.97181644623713e-06 2.812127722533e-07 0 1.00122080901308e-07 2.77814728510501e-11 2.36765401009603e-06 1.05561488867511e-05 1.47404579979734e-05 0.00684944975489342 0.0063247666954884 0.00486990895674547 0.000549134003907287 0.00255627361103039 0.00140319589164537 0.00133536294898924 0.000244288937549173 0.00017126289254775 6.17606031239822e-07 4.77113809114114e-07 1.95619358020123e-05 0.000600579024502241 0.00154811616542927 0.00165951103667967 1.089494545285e-05 1.17668497760914e-05 1.11968537894581e-05 0.00502807562086634 0.00384097791496115 0.0022154558824543 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 3e-133 480 81.53 0.150773195876289 0 noncoding 0 0 0 0 -0.0608318872617097 0.569402082831641 0.0769617913358906 0.156447485419389 GGAAAAACCTTCTGGCTAATCTTGTTATCTTAAAATGTAAATGATGGGAGTGTGTCTAGAAGATCTTTACAACCTCCAGACATTCTTTTGATTCATTGTAATAACTAATTAAAAATGTATATAACTCCATTGCTAACCCTAGTGAGGGGGTACTCTTTCTGCCCCCTTCTGAAGTCTATGGCAGAAGCTTTCTCTATCTCTTTTATACTTTAATAAAACTTTATTACACAAAAGCTGTGAGTGATGAAGCCTCGTCTCTGGCCCCAGGTTGAATTCTTCTCCTTTGGAAGCCAATTATCCTGGCTTCATTCCTGATTTAGCAACAACATTTCATATAAGATGTTCCCTTATAGAAGGTCAAGCTCTTGACTGATATGCAACTTGGTGTCTGGCATGGTTTCCCCAAATCTTTCTCTCTACTCTTTACCAAAGTTGTTGCCCCAGGTTCTTACCCTTGCCCGGTGGAAACTATGCTTCAACTGCAGAACCAAACCTCAAAAGGATGGAATTGTTAGGTAGGTAGAATAGAGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCAGAGAACCAGAGTGAAGACTTCAGGCAGAACAAACAGCACTCCGGGCTAACCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAACATATAAAAGGAGGAGCCAAAGAGCTTTCTCACTGACTCTCTCTCCCGTGTGCGTGGGCTCGCTCTCTCTCTCTCGCTCTCTCTCTCTCTCCCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCCTAAGAGCTATAACACGGTTTGTCCAAGACCCGAGAGCTGTGATGTGCTGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGGGACAAAGAACCGAGGAACCTACACTCGCGTGACATCTATGGTGCCGTGCTGAAACAACCTCCACGCGGAAGAGGCCAAGCATAGCAAGAGCCCAACTCAGCAAAGCTCCTGCGCTAGAAGCGGAAGGCGAAGAAACCCAACGCAGGGGAAGGCTCATCGTGCTGGAAACCGGGACAGCGAAAAACGAACTCAGAAAGCTCAGGCGGCCCAGTCTCAGATTCCAGAAGACCTCCAGTTAAGCAGTCAAGGTACCAGGACATGACTCCTGACTTCACTACTCACAAGTCAAGCCGTGGAAGAAAAGAGAAGAGGACACTTGATACACCTGTGAGCCCCTGGGAGATCTCAGATACCTATTCAGAACTACCAATGAGTGCCATTCTAATGAACACCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGAATAACTCTAAGGAGCCAACATAGCTTGACAGAGACTGTACTCCAAGACAGACAGGAGATAGATTTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCAATGTAAATTTAAAATTGACCAATGTTCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTACAGCCAACCATGGAAAATATCACACACCCTTGGACACCGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCACCATCCCAGTTCAGCAAGAAGTAGCCAGAAAGACCTCTATGCCCATATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGAATGTTAGGTAGGTAAATAGGAAAAAGGAGTCCAAAATGGCAGTGGCTAAAAGACAAGGAAGGTCAAAGGAAGGTCAGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACTCCTGGCTAACCCCAGTTTGCATAGGGCAGGCCCAGGTGGAGGAAAACTTATAAAAGGAGGAGCCAAAGCGATTTCTCACGACTCTCTCTCTCCCGCGTGCATGCGCTTTTTCTCTCTCTCTCTCACTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCCTAAGAGCTATAATACGGTTTGTCCAAGACCTGAGAGCTGTGACGTGCTGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACCTACACTCGCATGACAGAACTGAAGAGAAAAAAATCCAGCTGTAACTTAAGTCACCATATTGACTTCCACTGAGCCCGAGGCTTATTATACAGTGTAATATGTTAGCATGCTGCTGGCAGACTAGATAGCAAACACCAGATCATAGAAGAAAAAGTAGCACCCAAGGTACAGGGAGAACCTCTCCTTTCCCCAAAAAACCAATACATATGCCTCCCCCTCATTAACACTACATTTACAAATCTTGCCTTGGGGGCTTCTTGGTGGTCCAGTAGCTAAGCCACTGTGCTCCCAATGCAGGGGCCTGGGTTCAACCCCTGGTCAGAAAACTAGATCTCCCCATATGCCACAACTAAGAGTCCACAACTAAGGGTTCACAAGCTGCAACTAAAGATCCTGCATGCCAGAATGAAGACTGATGATCCCACGGGCCTCAACTAACACCTGGAACAGCCATTTTAAAAAATTTTAAAAAGAAAGCTTGCCTTGGTTGCTCCCTCATGAGGAGTTGATTGGCAAACCAAGTCCCCGATTCTCCACTCTCTGGGCTTTGAAGAAAGCTTGTGCTGTTTCAGTCTCGTCACTGGTTTTGTTATTGGTTTTGCACATTTGGTTGCTCAGACAGTAAAGAATACACCTGTAATGCAGGATGCCTGGGTTGGTTCCCTGAGTTGGTTCAGGAAGATTCCCTGGAGAAGGAAATGACAACCCACTCCTGTATTCTTGCCTGGAGAATTCCATGGAAAAAGGAGCCTGGCGGGCTACAGTCAACTCAGTTCAGTTCAGTTGCTAGGTCATGTCTAATTCTTTGCGACCCCATGGATTTCAGCATGTCAGATCTCCCTGTCCATTACCAACTCCCAAACTCATGCCCATTGATTTGGTGATGCCATCCAACCATTTCATCCTCTGTCATCCCCTTCTCCTCCC TCONS_00173071 r 5' 909772 TCONS_00173071 r 5' 909772 EMBV3_15992 CAATGCAGAGCTCCTGCGCTATTCCGAGAGTTTACAAACCAAGTGCTCCGCAGTTCCTGA Variant GeneID:512375|TWISTNB:NM_001105622:23_cdna 274^624 2 EMBV3_32585 GeneID:512375 4 GENE TWISTNB MGC140293 TWIST neighbor EMBV3_18469 GCCACTCCCGTCAAACTGACTTGGGCCCTGGTGGCCTTAATTTTTACATTTTTTGCCCCT Gene GeneID:538740|GPR15:XM_002684703:21_cdna Constitutive 0 NULL GeneID:538740 1 GENE GPR15 NULL G protein-coupled receptor 15 EMBV3_07897 GTATAAGCCGTCTGAGACCTTACTATGCTGTGTAAGTTGTGTTTGATGGATCGGTGTGAG Gene BVV0102_080426 + 0 NULL GK000002.2:91462905-91475467 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102940 TCONS_00102943 TCONS_00102941 TCONS_00102944 TCONS_00102939 TCONS_00102942 TCONS_00102947 TCONS_00102945 1 XLOC_061983 Coding TCONS_00102939 XLOC_061983 Coding Coding BMPR2 2:91280512-91468553 j TSS76551 11688 1 TCONS_00102939_4 1038 0.0165982203969884 13 0.93791214635184 0.00071986417824513 0.000359116538963325 0.000735859950444405 0.000840742784178691 0.000882077928001898 0.000269349495675819 0.000786663002786018 0.000758742731490246 0.00123660409328324 0.00013814058167634 7.10518031993624e-05 7.59511970030134e-05 0.000114474007864529 0.00024929254759107 0.000377973901832463 0.000787291360169433 3.14426985751492e-241 0.00128400058745474 0.000413568872991797 0.000943456166121884 0.000259512190720738 0.000460818633202113 0.000179962510165456 0.000887115756428302 0.0011009269581627 0.000744504661608789 0.000589903286601459 0.000126115252803484 3.56155252723759e-05 1.35967390181186e-05 XM_002685492.2 BMPR2 PREDICTED: Bos taurus bone morphogenetic protein receptor, type II (serine/threonine kinase) (BMPR2), mRNA. 0.0 1.047e+04 100.00 0.496577686516085 XM_005246795.1 BMPR2 PREDICTED: Homo sapiens bone morphogenetic protein receptor, type II (serine/threonine kinase) (BMPR2), transcript variant X1, mRNA. 0.0 8273 84.28 0.636464750171116 TCONS_00102939_4 sp|Q13873|BMPR2_HUMAN BMPR2_HUMAN Bone morphogenetic protein receptor type-2; 0.0 2019 96.44 0.999036608863198 3 coding 0 0 0 0 -0.0951253189243705 0.396941713838097 0.0289807336413349 0.623460169544065 CGCTGCTGCCGCCGCCCGCGCTGCACCACAGGCCCGAGACAGACAGGGCCGGGAAGAGCTGGAGACTGAGGAGGAGGCGGAGGCGGCGGCGGAGGCGGGGCGACTCCGGTGACCGGGAGCGCCGCAGACTGGCAGCTGCGGCGACTCCCCCCTTTGTGTCTGGTCTGCTCGGAGCCTCTGGAAGTGCTTCCCGGAGGGGCGCGGGGTGTTTCGCCGCCTCCCTAGCCACCTACATCCGCCCTCCCGCCGCCCCCCGCCCTCGGCCCGCGACACCCGAGCTCCGCCCGGAGCCTAGAGCTGCGGGAAAAGGAGGCGGCGGCGGCGGCGGCTTCCTCGGGGGAGGGGGTTGTGATTCGCTCACAGGAGCCCTTGAAGGGAGAAGACGAAGCTTTTACGGTGGAATTTACCTCAGGCAAGATGGAGCGGCAGCAATAAAAAAGAGAAAGAGCGAGGAGCGCACCCGGGAGAGCTAGAAAGGGTAGTGTGCCGACCCCTCCCCTCCCCCGCTTCCCACCGCCCCTCAGCCCTCCGGCCGGGACCTGCCCAACCCTCGCAGGATTGTTCCGCGAAGGCGTGAAGGCGGTGGGTTTGTCCATGGAGGCAGGCACCTTTTTCGATCCAGTCAAGGAGGAGGATTTGCTGTGCTCAAGATCGGAGTAAGGGAAGCACCGAAGCGAAAGTTAAAAGGATTCTTGCCCTCCCGGAGCACAGGCGATGCGCCTCGGGTCGCCGGGCGCCGCCGCCGGCCGTCCGGCTTCGCCCTTGCTGGCAGTCGGGAACTTGTTCTGATCCTCGGCGCCCCTCGAATGCCCGCTGCCCACTCTTCGGCACCCTGGATATGTTTTCTCCCAGACCTGGATATTTCTTCGATATCGTGAAACTACGGGGGAAATAACTGCGGGGCTTTTTTTTTTCTTCTCGTCTCCGTGCTTCTCCCCACGGACATGCCTTCAGTTTGGGGCGCCAAGGCACCCAGTCCTGGGCGAATGAACACCCCCAGCCGCGAGGGAGAGAAATGAAGGGAATTTGTGCAGCGGAATGAAAACTCTGCCGCTCGGTCCTCTCATCTGCCATTTGTCCTTTCAAACTGCATTGTAATACGGGCCGGAGAAGTCCGACGAGAGCGAGGACTAGCCTCCCGGCCGCGTTTCTCCGCCCGTATTCACTTTCCGTCTTTCTTTTTCTCTGCTCTCCTCGGCTGACCTAGGGATGACTTCGTCGCCGCGGCGGCCCCGGCGGGTGCCCTCGCTGCTGTGGACCGTCCTGCTGGTCAGCGCTGCGGCCGCTTCTCAGAATCAAGAACGTCTCTGTGCATTTAAAGATCCATATCAACAAGACCTTGGGATAGGTGAAAGTAGAATCTCTCATGAAAACGGAACAATATTATGCTCAAAAGGTAGCACCTGCTATGGCCTTTGGGAGAAATCAAAAGGGGACATCAATCTGGTAAAACAAGGATGTTGGTCTCACATTGGTGATCCCCAGGAGTGTCACTATGAAGAATGTGTAGTAACTACCACCCCACCCTCAATTCAGAATGGAACATACCGGTTCTGCTGCTGTAGCACAGACTTGTGTAATGTCAACTTTACTGAGAATTTTCCACCTCCAGACACAACACCACTCAGTCCACCTCATTCATTTAACCGAGATGAGACAATAATCATTGCATTGGCATCAGTCTCTGTATTAGCTGTTTTGATAGTTGCCTTATGCTTTGGATATAGGATGCTGACAGGAGACCGCAAACAAGGTCTTCACAGTATGAATATGATGGAGGCAGCAGCATCAGAGCCCTCTCTTGACCTAGATAATCTGAAACTGCTGGAGCTGATTGGCCGGGGTCGATATGGAGCTGTATATAAAGGTTCCTTAGATGAACGTCCAGTTGCTGTAAAAGTATTTTCCTTTGCAAACCGTCAGAATTTTATCAATGAGAAGAACATTTACAGAGTGCCTTTGATGGAACATGACAACATTGCTCGCTTTATAGTTGGAGATGAGAGAGTCACTGCAGATGGACGCATGGAGTATTTGCTTGTGATGGAGTATTATCCCAATGGATCTCTATGCAAGTATTTAAGTCTCCATACAAGTGACTGGGTAAGCTCTTGCCGTCTGGCTCATTCTGTGACTAGAGGATTGGCTTATCTTCATACTGAATTACCACGGGGAGATCATTATAAACCTGCAATTTCCCATCGAGATTTGAACAGCAGAAATGTTCTGGTGAAAAATGATGGAACCTGCGTTATTAGTGACTTTGGGTTGTCCATGAAGCTGACTGGAAATAGACTGGTGCGCCCAGGGGAAGAAGATAATGCAGCCATTAGTGAGGTTGGCACAATCAGATATATGGCACCAGAAGTTCTGGAAGGAGCTGTGAACCTTAGGGACTGTGAATCAGCTTTGAAACAAGTAGATATGTATGCACTTGGACTAATTTATTGGGAGATATTTATGAGATGTACAGACCTCTTTCCAGGTGAATCTGTACCAGAATACCAGATGGCTTTTCAGACAGAGGTTGGAAATCATCCCACTTTTGAAGATATGCAGGTTCTGGTGTCTAGGGAAAAACAGAGACCCAAGTTCCCAGAAGCTTGGAAAGAAAATAGCCTGGCAGTGAGATCACTCAAGGAGACAATCGAAGACTGTTGGGACCAGGATGCAGAGGCTCGGCTTACTGCTCAGTGTGCTGAAGAGAGGATGGCTGAACTTATGATGATATGGGAAAGAAACAAGTCTGTGAGCCCAACAGTCAATCCAATGTCTACTGCTATGCAGAATGAGCGCAACCTGTCACACAATAGGCGTGTGCCAAAGATTGGCCCTTATCCAGATTATTCTTCTTCCTCATACATTGAAGATTCTATTCATCACACTGACAGCATTGTGAAGAACATTTCCTCTGAGCATTCGATGTCCAGCACACCTTTGACTATAGGGGAAAAGAACCGAAACTCAATTAACTATGAACGGCAGCAAGCACAAGCTCGAATCCCCAGCCCTGAAACAAGCGTCACCAGCTTGTCTACCAACACCACAACCACAAACACCACTGGCCTCACTCCAAGTACCGGCATGACCACTATATCCGAGGTGCCATACCCAGATGAAACAAGTCTGCATGCCACCAATGTTTCACAGCCAGTCGGGCCAACCCCTGTCTGCTTACAACTGACCGAAGAAGACTTGGAGACCAACAAGCTGGACCCAAAAGAAGTCGATAAAAATCTCAAGGAAAGTTCTGATGAGAATCTCATGGAGCATTCTCTTAAACAATTCAGTGGGCCAGACCCACTGAGCAGTACCAGTTCTAGCTTGCTTTACCCACTTATAAAGCTTGCAGTTGAAGTGACTGGGCAGCAGGACTTCACACAGGCTGCAAATGGCCAAGCATGTTTAATTCCTGATGTCCCACCTGCTCAGATCTATCCTCTCCCCAAGCAACAGAACCTTCCTAAGAGACCTACTAGTTTGCCTTTAAACACCAAAAATTCGACAAAGGAGCCCAGGCTGAAATTTGGCAGCAAGCACAAATCAAACTTGAAACAAGTAGAAACTGGAGTTGCCAAGATGAATACAATCAATGCTGCAGAACCTCATATAGTGACAGTCACTATGAATGGTGTGGCAGGTAGAAACCACAGCGTTAATTCCCATACTGCCACTACTCAGTATGCCAATGGCGTAGTACCATCTGGCCAGACAGCTAACACAGTGGCACACAGAGCCCAAGAAATGCTGCAGAATCAGTTCATTGGTGAGGACACTCGGCTGAACATTAATTCTAGTCCTGATGAGCATGAACCTTTACTGAGACGAGAGCAGCAGGCTGGCCATGATGAAGGTGTTCTGGATCGTCTTGTGGACAGGAGAGAACGGCCCCTAGAAGGCGGCCGAACTAATTCCAACAACAACAACAGCAATCCATGTTCTGAGCAAGAAGTTCTCACACAGGGTGTTCCAAGCACAGTAGCAGACCCCGGACCATCAAAGCCTAGAAGAGCACAGAGGCCTAATTCTCTGGATCTTTCAGCCACCAATGTCCTTGATGGCAACAGTTTGCAGTTAGGTGACTCAACACAAGATGGCAAATCAGGATCTGGTGAAAAGATCAAGAAACGAGTGAAAACTCCCTATTCTCTTAAGCGGTGGCGCCCTTCCACCTGGGTCATTTCCACTGAACCACTGGACTGTGAGGTCAACAACAATGGCAAAGACAGGGCAGTGCATTCCAAATCCAGCACCACTGTTTACCTTGCAGACGGAGGCACTGCCACGACGATGGTGTCTAAAGATATAGGGATGAACTGTCTGTGAAATGTTTTCAAACCTATGGAGTGAAATTATTTTTTGCATCATTTAAATGTGCAGAAGACATTAAAAGAAAAAACTGCTTTATTCTCCTGTCAGTACCCCCTCCTACCCCTGCAACAAGGACTTGCTTTAAATAGATTTCAGCTATGCAGAAAAATTTAGCTTATGCTTCCATATTTTTTAATTTTTTTTAAGTTTTGCACTTTTGTTTAGTCTCGCTGAAGTTATATTTGTCTGTTATGACCACAGAATAATATGTGTGTGTATCAAAAGTGGTCTCAAAATATTTTTTTAAGAAAAAAAAGCAGAAACAATGTATTGCTGATAATCAGTTTGGACCAGTTTCTAAAGGTCATTAAATCAGAAGCAAATTAAGACAGGTTTGACTGCAGTGGTGTCTGGTATCCATGTTTTATTTCTGGGCACAAGCTAGTTTGTATGTTGATACGTTCCTGAACGCATCATCTGTTGGACATTCTTTTCTCTGTGTTTTGTTTGAATGTGCAATAGTCTATAGGCCACAAATAAGCTTTCTCGTAAGCTCTCTTCCTAACAGAGCACACATTCTTCCAAGATATGAACATTTTCCTTCCCCACCCTCCATACTTTTGGCAGGTCAGTTCTTTGACAGTGAGTTTTTGCACAAGAGAAAGCAGCTACCTGATTTCTTGCTTTCTCTCTCCTTATGGAGAATGCAGAAACGTCTCAAAGGGCTCTAAAGAAGGAACTACCAAAACCTAATTTGAAATGCCATTTCTTTTATCCTTCCAAATCCTAAACATTTCCTTCCGGGCATTTTAATAAACATACTTGGTTTCTGGTTTTGGAAGTTCGTAAGAGCACAGAACAAAGAGCAAGTCAAATATTAGCTGTTTTCCATTTTATTTTATATATATATGTTCATGTTCCATATTCATTTATTTAAGAAGCACATTTTTATCAGAAAACTTACAGAGCTTTCCTTATGGAATTTTTAAGTAGGTAGATGGTTAACACAATGTAGTATTATAGTCTTCATTCTCTGAATATGCTGTGTTTGACATAAATAAAATTACATCCTGTTCAAAATAACTTCAAAAGTAATTCATAGTTGTGAACCTGTAGTATCTTTTTATATTTTCCCAAACGAGGCCTAGTAACTTTATCTGGAAATTATTCCTTTTCCCATGACCTAAAACACTGTGTGGAAAAATCATTCAACTGGCATGCCAAGTCCCTGTGGAAGGAAGAATTGCTGCCAAACCTATAATTTTTGAGCAGACTGAGACTTACCTCTCTCTTTTCAAAACTGTGTTTCTTCACTAATCTTATTTTCATAGTTTTTCCATTTGCCAGTTTTTATATCTTTGATATGTGAGCATCGTTTTATGATTTTACATTATATTAGAATGTACCTTTTAGTGATAACATCATGTATATTCAGATCATGTTTTTTTTTTAAAGCTTCCTTTGCTTCTTTCATTACTGATAATCGTCTCTAAAACAACTTCTGCATGTTTTTTTTCTTTATAAATAAAGCACTTTATGTCAAATAAGGGCCTTTTTTATAAGCACAAATTATTTTCTATCAATTTGCAAACAATGAAGAGCTCACTTTTTCCCCCAGATTCTCAGATTACTTCATAGACTTTCAGTTCTTAGATTTCTCTGGAGATAAAAAGCTCACAGGAAAACACAAATTCCTGATTGAGATTTTTATCTCCTGAACAAAGTTTTCACACTCATATTCTTCTATCTGCATCACTTAGCTAAAGACAGACTCTGTCAAAAAAAAAAAAAAAGACAGACTCTGTTTCTCAATTTGCTATCCAAAATATGTATGACTTACTTGTGTATATAAGCCTTCTTTTGTTTGCCATCTATTGTGATCTTATGAAGAGAGATGTCACAGTGCTTAAACATTTATTCAGCTGGATTGATGAACACAGTTTTGAAATCTTAGAAATGACATTATTTTGCTAGTGCCCAAGATTTCCACCTTTTGTATTTTATTGGCCCTTCTATTCATTCAGACCCTTAATATATTTTTCAGTCATCTGGCATAAAAATTTTTCATTTATTTTTTTATCTATGTAATGATTTATTTATATTTTTTCCTGTAAAATTTCCCTTGGTTCTCTTAATTTTAAATGTCTTCCAACTGCATTTCAGGATATTATTTTTAAGTAATTGTAGAACACCTTTGAGTCAAAATAAATTCTATTTCTTCTTCAATTGGAAGCATCAAAGATAAATGACCATTTGAGGTCTAACTGATCTTTTCCAGACAGAAGAAGAGTTGCCTTACATTCTACTACACTGTGTTTGGGCCAGATGATTGTAAGTTTTTCAGGATTTTTTGGTATTTAATAGTAAAATGCTCTCAAAAATTGGTATACCAAATTAAAAGAACTCCTTATAGTTTCCCATTTTATGCAGGCATGCTTAAAACAAATAATTTTCTTTCTCTATGTTTTTATTAGCAGACTCTTGGTAAAGTAGGAGAAATAGAGAGTGTAGATCATTTTAATAAATTTTAAGTTAAATTTACCTCAGACTGATTTAGAATCTGTTTGCAAATATACAAGCGAGCAAAATTACATAAAACACTCATTTGCAAACTATTTAATAATAAATGTATCTTAAATCTAATATTTAACTGTATTCAAAAATTTTTGCATGTAGAAAATCATTTGGGCTCCTTTGAATAAGAGGCCATTCATTTAATGAAAAAAATACTAAAATTCAACCTTAAAAGTATTGTAACCTTAAAAGCATCATAATAGGTAATCAAAATAATTCCCTTAACTATCATAATTGTATATCAGAACTAAGTCTTTGAAAGAACTTAATTTGAATTGAATGTAGACAAAATGATTTAATGATAGCTCCTAAAAAGTTCCCTCTTTATAAATGCATAGTTGGGGAAAAAAAATACTGGTGTAAAAAGTTATGGGAAGGCAAAGATACAAATAGTAATTGGCCATTTATTACATACTGAATGCTGCGATACAAATACATTATCTCTTTGATTCCTCATGACAACCATATGAGCATTATGGGTACCATTCCCATTTTACAATAGGGGAAACTGAAGCTAAGAGAAGCTAGCTAGTTTGCCTGAGGTCTACACCTTGTAAATGACAAAGCTGTGATTTTTTTAACCTAGGCTTGTTCTCTTAACATCTCTTTCATCCACACCACACTGCCTACATGCTGTATGACAGAATGCATGATGGACTAACATTTTGTAAGAAATTTAGTCATTAAACTCCAGCACAATTGTGGCGAATATAAGCCAAACCAGATACCTTAATGGCTTTAGAGTTAGGAAAACATAAGAAGATGTACAGACATGTCTGTGGTGTTTGTTGCTTGAGAAATAATTACTAATTCAAGACGAAATTCAATCCCACATGTGCCATCATGAATCTTAAAATCATTTAACTTCTCTTCACTCCCGATATTCTTATATTACAAAACTAAATGGGAAAGGCAAAGGTGAATTGTGGGAACAGAGACCTTTTCCTAAACTGATTCCATTCTTGACCTGGTGGAATTAGTTTAATGTGTCCCATCAGTCCTTGCACTTCATTTTGAAAATTTCTACTTTTAATGACTTTAGAAAATTTTACTAATCCAGAGAACTAATAGAAGAGGCTGTAGGAAGAATAGAAGGAAAATACTGTTTTTATAAAGCAATTTGTATAGCTTCCTTAGGTGTATCCACTCACTCTGGAAAATGTGTTGGTTCTGAATGTGACAATAATTAAAGGTAGGAACACTCAAATAAGTATGTGTTTCAGTGGGAATTATCACAAAATTTGGCAAGTATGTTTATTTAAAATATTTTCCATCCTGGCTTCTAAAGCCAAATGAAATTCACAAACTCTTTTTTCTTATTTATAAAAATATTTCATTGGAGGTAATTAGCTCCTAGAATATGAGATTACATTCTATTTCTTTACAACCTTTTATAAATTTATGTTAAACTTACTACCAGTTGTATGCAGGCTATTACATATCAATAACTATTCACAGATTGCTATATATATTACTCTATCTTCCAAGCTAACTTCTTAAACTTGGAATCTGTACACACATGTTGGTTGATTATCTAGATCAATTATCCTAGAAATTATGTAATTCTCCCATAGACACCCCAGGAGTCTTTCAGAGTAAGATTTTTCTAAATATTCATACCTTTTACTGTCAGTTTGCTCATCAGCAAATAAAAGTTCATTTTAACTTTTAGATTCTGAACTGTGTAAACTTTAGCCAAAACTACCTTGTGTGATCCACTCCTAGATGATAATCCTTGATTAAGTAAATCTGGCAAATCACTATTTGAACTAGTTTACACAAATATTATCAAAAGTAGGCTTTTCTACAGGTTCCCTGATTAACATACAAGAAAAGAGGAAATCCCTGGATGGCACTCTGGGTCTACTTTATTTGATTCACCTGTTAGTTTCTGTCTTACTCTGTCCCTTGGTTATCTGACTTGCAATCTTCTGTGTCTGGAAGGTTTTCTTCACATTTATTCTGCTTCCCTCCTGTTTAATTTTGTATCTGTTTATCTTAACCAGCAGATAAAATAAAAAGGAGGGTGACCGACTGGTCATCCTCTCCAACATTGGTTATTCAGGATGCTTCAAGCTTCTCGACACTTAAGTCTCAGTTCTTCACACAAAATTTCTTTGGTTCCTTTGCCATTTTCTCCTCAGTTTTTACTATTTTCATACCTACTTATATTTAAGAACACCTAAAATTATGCTTTGTTATATTCAAGTTCATTACTCCATTTATGGTTAAATAGGGTAGAATTCAGAATTAAGATGTTTCCATTTGACAGTAGATCTAACCATCAGATTGTCAGCAAATAAGCACTTCAGTTTATATTATCTAACTTTTTTTTTAGTCAAATTGTGGAGTTCTGTGATTTTATACAATAGTTTATAACTAAAAAGCCATGCATACAGAATTGTATATCACTTTATTGTTATTTTTAACCTATATTGCCGCAGGCTTAACATTATGATTGAGCCACAACATTTTACATATTTCTTTGCATCAAATATTAAACACAAAATGCAAGATTAACTTTTGAAAGCAAACCCTACAACAATCAAGTATTATCTACAAACATTTTTGCAGACCACTTTTGAAATACTTGTCATTGTTTTTTGCAACATAGACTGGACTATAACAACTTTCATTTAACTTTTAAGTGGTTAAAATTGAGTGTTGTACATATAAAGAAAAGGTTTATCTCATGGCTGGTAACATTTGAAAAGTAAATATTTAAGAATTTATGCTGTGTATTAAAATTATGCCCCAAATAAATATATCTTGAAAATTCTAATTCCGTTATTACTGTGATATCCATCGTGTTACTATTAAATGTTATAAAATTATTTTTTTTAACTTAATTTGAGACCCAGATTTTAAAATCTGGGTAAGAGACAAAGAATCTTATCACCGATTAGCACGTCCAGTTTATGACAATATTAAGCAAATTACTGTATTTTAAACTGCAACTTGTTTTTGTCATTAATGTTTTAAAAGGCATCATGTAGGTTTTTTTCCATTTTATTTGTACTTTAAGATTTCAAAACCATCTTCCTGTTTTAGACTCACTCTATAGACATAATATTACTTAAAAACTCAGGGTCTCTTTCATCCCTTTGCACATTGAAAAACTTCAATTGATAGCAAACAAGCAATTAGATACAGTTGAATATTTAAGTTTTTGTTACACACAGAGTTCATTTAATGTTTCACCTTACGATTTGACTTAACTTACATAGATACCAAATTTCATTAATTGTAAAAACTTGCCCAGTTTTATAATTACTGAATAGAGGGAAATGACTCAACTAATTCGCTACATGTTACAGCATATGTAGGCCTTAGAGTTGAAGCACAGTCTTCAACCCCTTTCTGTTGTTTGGTTAAATAGTTATACATGAGACGGTTCATTTCGTTTCATTTTTTAATGGGGGAATTTGGTAAAGTAGTTCCTCAGAAATAAAATTTTTCAAGAGGTAATTTAACATTATTAAACTGTCTTCAAAAGTGAACTAGTGAGTTTATAGCTTTAGTAATAGCTTGGATGGTTTTGAGAAGGTAACCTACGGTAACCTATTTATCACATCATCACATCCAAATAGAATTTTTCTTCCAGACAAGTTCAAACTCCAAATTAGTAAGCTGTATATTTAAAATCCTTGCAGTGAAGTTACTTGTAACAAGTCTCTTGTCTCAGGCTCTCCACCTTATTACCAACCCTCTGAAATGTGATAGGGAAACACATTTTTAAAGCTTAACAGTAAGAAAACTGAAATACTAATAAAAGATGAACTTCAAAGATAAGTCCTGGTTTAATGCTAAATCGCTTAGAGTCTGTGGCTTTTCTTTTTCTGGTCACATTTATTTATTTAAGCAGTTTTTGTATGCCTTGTCATGTTTCCATAGAGATCATATTGTATAAGTGTTTGTATAAGCTGGAATCATCATTAATTTTCTGTTGATAATTTTTCAGATGAAGATAAGTGGATAATTGTAAAATACACTAACTCTTAGGGTGTTGTAGTAGCTGAAACATGGAAATGTGTAGCCACCGTGCTTTTTCTAAATGGACAGGAGAAACATAAGCTACAGAGTATTCATTTCTGAGGATGCTTTTCTCTAATGAGAAAGGCTGAAAAATATTGGCAATTCCTCAGAACCCTCTTTCTTGTTAACGGGTATCTCTTGTTGGTGTGTTTTGCTCTTACATTACCAATAGAATATCATATATGAATTTATGAATAATTGCTTTCAGTTATTTTGCTTTTGTATAAGCCGTCTGAGACCTTGCTATGCTGTGTAAGTTGTGTTTGATGGATCGGTGTGAGTATGAAATAAAGCAAATCACTTTTCTTTTGTATTATCTATGGATGCCACTATGAAAGCTGACATTAAGCCACTAAAGAGTTTTCTATGAATAATTGTAAGTAAATGCTTTGATATATATAAACCTAAATAAAAAGATTGTATTGATACAGAGACATTCGAGAAGGAGATTTTAAGGGAGTTCTTTAGGTTTAAAAAAGGCTTGCTGTAAAATGGTGCATTATTCCATTTATTAAAGATCATATTAATGACAACAGTGATTGTATCTTGATTTTATGAGGTTATCAACAAATATGATTGTTAGTATGATATTTTAGGTATTTTGCATCAGAATAGCAATTGTTTGATATAGTATGACTTTCATTACTCAGTATGATACATCAAAACAAAAATCAACTAACATTAGAATAATAGTTGCACACTCACTGTATGCCAGGTATGGTGTTATTTATTTTATGTATGTTGGTAATTCTTATAGCAGTTCTACAA EMBV3_26170 CCTTGGACCACCTAGCAATAACTAACTGCCGGCTTACAGAATCAGACCTGACCCATCTGT Gene GeneID:789138|LOC789138:XM_002694081:318_cdna Constitutive 0 NULL GeneID:789138 16 GENE LOC789138 NULL similar to PRAME family member 8 EMBV3_24375 AAGCCCCCTCTTTTTTAGGCATATATAGTAACATTAGCAGAAAGATTTAATTTGGGCAAC Gene GeneID:505228|THRAP3:XM_002686473:527_cdna Constitutive 3 NULL GeneID:505228 3 GENE THRAP3 NULL thyroid hormone receptor associated protein 3 EMBV3_35048 ACAGACAAAGGAGTCAGTGCCTTTGGACAGGAATGGAGAAGCCAGAGGTTATTGATGAAC Variant GeneID:515824|PUS3:NM_001034512:17_cdna 424^919 1 EMBV3_43744 GeneID:515824 29 GENE PUS3 MGC128956 pseudouridylate synthase 3 EMBV3_35121 CTTGAACCAAAAGTAGACTGTCACATTACTGACACTGGAGGCCTTGGAGGGTGGCTGCCT Gene GeneID:514631|CDCA7L:NM_001104977:17_cdna UTR3_Alt 2 NULL GeneID:514631 4 GENE CDCA7L NULL cell division cycle associated 7-like EMBV3_28923 CCTCCATTTGCTGGAGCATAGCCAGTGAGCTCCTTGTACTTCCTTATCTGCACGCAGTGT Gene BVT0102_314452 + 1 EMBV3_26106 GK000026.2:38657254-38923064 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152321 TCONS_00152320 TCONS_00152318 TCONS_00152319 TCONS_00152322 1 XLOC_092309 Coding TCONS_00152322 XLOC_092309 Coding Coding FAM204A 26:38922686-38951682 j TSS113627 1361 1 TCONS_00152322_1 114 8 0.953336782203828 0.000668995632182934 0.000467070579937178 6.47875978239322e-05 1.0993547880174e-16 7.10648092165142e-09 2.64917074707008e-08 2.13538157345132e-11 1.6549784582505e-08 1.22166958377411e-08 0.00161160454259998 0.000325965162839071 0.000664175068853955 0.000180544071687156 0.000938823124798133 0.000128197630019697 0.00196684491996137 0.000218296164425882 0.000269694843297792 0.000312132401993175 3.8660005549527e-11 1.55360892880521e-09 0.000617177988266178 0.000544275262494346 0.000855664894636335 1.12874560089591e-09 8.04873852592157e-12 6.04893830561192e-16 0.000142700937824201 0.00023731756788632 0.000256066931236847 NM_001035052.1 FAM204A Bos taurus family with sequence similarity 204, member A (FAM204A), 0.0 1481 98.24 0.626745040411462 NM_022063.2 FAM204A Homo sapiens family with sequence similarity 204, member A (FAM204A), transcript variant 1, mRNA. 0.0 996 80.29 0.781778104335048 TCONS_00152322_1 sp|Q3ZCI6|F204A_BOVIN F204A_BOVIN Protein FAM204A; 4e-75 226 99.09 0.956140350877193 0 noncoding 1 1 1 1 -0.114994305495594 0.340862765528439 -0.00263985599564964 0.966097403944353 NGTTGGTGGGAGAGGAGTTCTCCGTCCCACCCCGGCCGGAGTGAGACGGGATTAGGCTTTCGACCCGGGAAATGGGCTCTTGTTTACAGTTGCCGTACCCGGAAACGAGCTGCAGTTGATGGGAGAGTCAGCAAGAAAAGATGTGGAGTGGGCTGTTACCTCCTGGCCTAAATGAAAGTGATGTTGAATTGAATTCTGACGATGATACCACATTAGAGAGCTCTGAACTTAACTTACAAGAGGGTAAAGAAGATGGGACCTTTGAAAAGACAGAGATGGTAGATATTCCTACAGATGGACCAAGCACTGAAGCAGAGGCAAATATAAATGCATATGAAGAGTGTCCCTCTGGAATTCCCTTAAATATGTGGAATAAATTTCAAGAATTGCATAAAAAGCATTCTGAACAGAAAACTTCAGCTTCTAGATCCGAAAAGAAAAAAAGAAAACGCTCCAGAAAAGGTGTTTTAATTCAGGTAAATTGAAGAATGAAGAAGAATCTCATAGTGAACAATCTTCAAGTGAAACCCAGTGGAAGGAGCTTACCCAGTATTTTGGAGTCAATGAGAGGTTTGACCCCCCTGTTAAAAGGAAAAAAGTTGAAAAGTCGGGACTTGAAAAGAGGATAGACCAAGCTGTGGAAGAGTGGAACATTGAGAAGGCCGAGGAACTCAGCAACCAGCTAGCTACTCGTGAGCTTGGTGTAAAAATTGCCAAAGCTATTGCCTGCCACAACTTCGTGAAAGCCAAAAAGGAGGCTGAAAATTCACAGGTTGCACGAAAAAAGAAGAAACTTGCCTGGGGATTTGAAGCAAAGAAGAGGTGGGAAACCAAAAGCAACATGGGATATATGTGACTTGCCAGAGTTCTTCAAGACCTTTGAGGCTTCACTCGAGTCTTCAGTTGCTCAATTTACTAAAAAAGATTTTGTCAGAAAATTGATGGAAGTAGAAAAAATAAGCATAAAATTTGGGAGTTGATTATCAAATCGTTTTTCAGTCTTTTTCTAAAGAGTCCATCCCACTGAAGTGAGTGAAGTGGACCATCCCGTTATTTGTGCAAGTAATCTAAGCATATATACAGGGGGAAAAAAAAGATAGGATGTATTTATTTATTTATGTAGACCTCCAGTATAGAATCAGTTTTACTTTTCCTCCATTTGCTGGAGCATAGCCAGTGAGCTCCTTGTACTTCCTTATCTGCACGCAGTGTAACTGCACTCACTCTGGAGCTGTTTTTAAGATGGGCATTTGTGTATAATGGATTAGTCATAAGTGCAAGAAAGATCCTGTGTTTACAAATGCCTTTATCTTAATGTTACAAAAGTAATTATCGGTTCTTTATTGTAGGCAGTAGAGTTG EMBV3_02562 TGCAGCAAATGGGGCTACTCTCTCGTTGCAGTGTGCAGGCTTCTATTGTGGTGACTTCTC Gene BVV0101_055057 + 1 EMBV3_01726 GK000019.2:36542421-36610212 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11459 TGCATTTTGCTCCCTTGTTGGTGCAGATCCCAGCCAGGACGAAGTCACGGTTCTTGTCTT Gene BVV0102_080741 + 0 NULL GK000015.2:40902649-41003856 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061288 TCONS_00061270 TCONS_00061267 TCONS_00061253 TCONS_00061273 TCONS_00061274 TCONS_00061266 TCONS_00061283 TCONS_00061268 TCONS_00061276 TCONS_00061254 TCONS_00061257 TCONS_00061281 TCONS_00061284 TCONS_00061289 TCONS_00061252 TCONS_00061278 TCONS_00061269 TCONS_00061282 TCONS_00061292 TCONS_00061290 TCONS_00061291 TCONS_00061259 TCONS_00061287 TCONS_00061264 TCONS_00061279 TCONS_00061271 TCONS_00061285 TCONS_00061261 TCONS_00061256 TCONS_00061255 TCONS_00061277 TCONS_00061260 TCONS_00061263 TCONS_00061258 TCONS_00061286 TCONS_00061265 TCONS_00061262 TCONS_00061280 TCONS_00061275 TCONS_00061272 1 XLOC_036951 Coding TCONS_00061280 XLOC_036951 Coding Coding MICAL2 15:41003238-41160775 j TSS45649 6814 1 TCONS_00061280_7 960 20 0.956873349583587 0.0153240425287868 0.0177438889217673 0.0147371753698501 0.00992007923958923 0.0110290828104388 0.00559750830904282 0.00553932886463184 0.00775005549251539 0.0104360521186202 0.00251685626859305 0.00110693914297323 0.000300593220038742 0.00132365831644184 0.00163962092265254 0.00205187401175457 6.17618932054912e-12 6.77285546089276e-07 1.30924236267543e-06 0.0125572870144997 0.0149082489806044 0.00306753046642064 0.000434504709948599 1.54570227302961e-25 0.00032016736762258 0.0130053812146105 0.0118034688694089 0.00661105312363686 0.000349044417848142 2.11436032176552e-07 3.77905446810295e-07 XM_005194606.1 MICAL2 PREDICTED: Bos taurus microtubule associated monooxygenase, calponin and LIM domain containing 2 (MICAL2), transcript variant 0.0 9918 100.00 0.806868212503669 NM_001282667.1 MICAL2 Homo sapiens microtubule associated monooxygenase, calponin and LIM domain containing 2 (MICAL2), transcript variant 6, mRNA. 0.0 5660 79.31 0.963164073965365 TCONS_00061280_7 sp|Q8BML1|MICA2_MOUSE MICA2_MOUSE Protein-methionine sulfoxide oxidase MICAL2; 0.0 1687 84.48 0.998958333333333 5 coding 0 0 1 0 -0.251356038432003 0.379483371384414 -0.0273571040634736 0.658372680146375 CTCCCGGTCTTGTCCGCCGCAAGGCGCAGAACCGCAGGCGCTCGCCGGGCTAAGCCTGCGCGGGGACGCCTAGCTCGCTCACAGTTCGGCCGGCGGCCTCCGGGTCCCGACCACTGCGCCCGCGGCCCTGGGCGAGAATAGAGGCTGGACTCGAGGTTCGGCGGCCGGCGCCGCTCTCGGAAGATGGCAACCTGTGCATGGATCATCCTGGGAGGAGCTGACTTCAGTCATCACGATGCCTAAGAATCGAGTGTGACATTTCTCCAGGCACTTCATGGTGTTCTCCTCCATCCTCTCCACATCGCTGCTCTGGGTGGCTCCTGAAACATGGGGGAGAATGAGGATGAGAAGCAGACCCAGGCCGGGCAGTTATTCGAGAACTTTGTCCAAGCTTCCACATGCAAAGGTACCCTTCAGGCCTTCAACATCCTCACCCGACAACTGGACCTAGACCCTCTGGACCACAGAAACTTTTATTCCAAGCTCAAGTCCAAAGTGACCACCTGGAAGGCCAAGGCCCTGTGGTACAAACTTGACAAGCGTGGGTCCCACAAAGAGTATAAGCGAGGAAGGTCTTGTATGAACACCAAGTGTCTCATCATTGGCGGAGGACCTTGTGGTCTGCGTACTGCCATTGAACTTGCCTACCTGGGGGCCAAAGTGGTCGTGGTGGAGAAGAGGGACACTTTCTCCCGGAACAACGTGCTGCACCTCTGGCCTTTCACCATCCATGACCTGCGAGGCCTGGGAGCCAAGAAGTTCTATGGGAAGTTTTGTGCTGGTTCCATCGACCATATCAGTATTCGTCAGTTGCAGCTCATCCTGTTCAAGGTGGCCTTGATATTGGGGGTTGAAATCCATGTGAATGTGGAGTTTGTGAAGGTTCTAGAGCCTCCTGAAGATCAAGAAAATCAAAAAATTGGCTGGCGGGCAGAATTTCTCCCTGTAGATCACTCTCTGTCGGAATTTGAGTTTGATGTCATCATTGGCGCAGATGGCCGCAGGAACACACTGGAAGGGTTCAGAAGAAAAGAATTCCGTGGGAAGCTGGCTATTGCAATCACCGCCAACTTCATCAACAGAAACAGCACAGCTGAGGCTAAGGTGGAAGAGATTAGCGGTGTGGCTTTCATCTTCAATCAGAAATTTTTTCAGGATCTTAAAAAAGAAACAGGGATTGATCTTGAGAACATTGTTTACTACAAGGACTGCACCCACTATTTTGTCATGACTGCCAAGAGGCAGAGCTTGCTTGACAAAGGTGTCATCATTAATGACTATACCGACACAGAGACGCTGCTGCGCGCGGAGAATGTGAACCAGGACAACCTGCTTTCCTACGCACGCGAGGCTGCAGACTTCGCCACCAATTACCAGCTGCCGTCTTTAGACTTTGCCATGAACCATTACGGGCAGCCCGACGTGGCCATGTTCGACTTCACCTCCATGTACGCCTCCGAGAATGCGGCCTTGGTGCGCGAGCGGCAGTCACACCTGCTGCTCGTGGCCCTCGTGGGTGACAGCTTGCTTGAGCCATTCTGGCCCATGGGCACTGGCTGTGCCCGTGGCTTCCTGGCAGCCTTTGACACTGCATGGATGGTGAAAAGCTGGGACCAGGGCACTTCTCCCCTGGAGCTTCTGGCTGAAAGAGAAAGTCTTTACCGACTGTTACCTCAAACGACCCCAGAGAACATCAACAAGAACTTTGAGCAGTACACATTAGACCCGGCGACACGGTACCCAAACCTCAACTCAAACAACATCAAGCCGAATCAGGTGAAGCATTTGTACATTACTAAGGAGCTGCACCAGTATCCTCTTGAGAGGCTGGGCTCAGTGAGGAGATCCGTCGGCCTCTCCAGGCGAGAGTCAGACGTCAGGCCCAGCAAGCTCTTAACCTGGTGCCAGCAGCAGACCGAGGGCTACCAGCATGTCAATGTCACCGACCTGACCACGTCCTGGCGGAGTGGCCTGGCCCTGTGTGCCATCATCCACCGCTTCCGGCCTGACCTGATCAACTTTGACTCTTTGAATGAAGACCACGCTGTGGAGAACAACCAGCTGGCATTTGACGTGGCGGAGCGTGAGTTTGGCATCGCCCCAGTGATCACAGGCAAAGAGATGGCATCGGCCCAGGAGCCTGACAAGCTCAGTATGGTCATGTACCTCTCCAAGTTCTACGAGCTCTTCCGGGGCACCCCTCTGAGGCCTGTGGATTCTTGGCGTAAAAACTATGAAGAGAATGCCGACCTCGGCTTGGCCAAGTCATCCATTCCTCATCACTATCTCAACCTCACGTTTCCGAGGAAGAGGACTCCGCGAGTGGACAGTCGAACCGAAGAGAATGACATGAACAAGCGGAGGCGGAAGGGCTTCAACAACCTGCACGAGCCTTCAGCCTTTTCCAGCCAGAGCTTGGGCTCCAATCAAGAGGGCATTAAGGAAGGTGGGAATCAGAACAAAGTCAAGTCCATGGCAAGTCAGCTGCTGGCCAAGTTCGAGGAGAGCTCACGGAACCCCTCAATCCTGAGGCAGGAGTCCGTTCGGAAGACGTTTCCCCTGAACGTGGGTGGCAGCGACACCTGTTACTTCTGCAAGAAGCGCGTGTACGTCATGGAGCGGCTGAGCGCGGAGGGCCGCTTCTTCCACCGGGAGTGTTTCCGCTGCAGCGTCTGCGCCACCACCTTGCACCTGGCCACCTACGCCTTCGACGTTGACGAAGGCAAGTTTTTCTGCAAGCCTCATTTCATTCACTGTAAGACCAACAGCCAGCAACGGAAGAGACGGGCAGAGTTGAAGCAACAAAAAGAGGAGGAGGGGATGTGGAAAGAGCAAGAAGCCGCTAGGCGAGACCCTCCCTCGGAAAGTTCTTGCGCTGCCGCTGCCATCGCCACGCCGGAAGGCAGCCCCCCAGGTATCCCCAATTCCTTCTTTAGGAAGGCACTAAGCTGGCCCCTCAGGCTGCCGTGGGGCCTGCTTCACCTTCCCCGGAGGCTGATTAACTGGATTCAGGGACTCCTACGCGCCACCAGCCTGCATATCAGGGACAATGCTTACAACTACTGCTACACCTACGAGCTCCTGAGCCTCGGGCTGCCCCTGCTCTGGGTGTTCTCCGAGGTCCTGGCTTCCATGTACCGGGAGTCGGAGGAGTCCCTCCAGAGCATCCGCGACTGGCTGCTCAGACGCGTCCCGGCCAAGCTGCACTGAAGCCCAGCCCCACAGTACCGTAACATTTCCCGCGTAGATGGCGGCGTGTTCGGCCAGCTCAGGCGCTGGCCAGGGAGCCCCACGCCCTTGAACCAGTTAGCGCAAAGCCAAAGAATTTCCCGTCGGCCACCTGCACCTAGCCTGGTCACGGTGAACATCTGCTTCAGGCCACCATGACATGAAGGATGTTTTTTTAAATAGCTTTGTACTTTTATACCAAAGCGAGCCATACTTCTAGGTTTACATTTCAATTTTCAACGTTTAATAAGCCAAGAGAAAGCATTTTTTTTTTTTTTTCTATGAGTGTCAGTTTTTTTAAACACGGGTTTGAGGTTTATAACTGGTATTACAAAAACCCCTTCCACTCTGTGGTCTTGAAATAGCCGCTCCCTGTAACGTGAATACTTGGGAGCGAGCATGCAATCTCCTGACAGTGCCTTCTGATTTTGTGCCTGGATACCACTTGTCAACACAGGACAATTGTTGCAACATGAAAGCATAGTAATTTAGAAGGAAAAAAAACAAAACAGAAAGGACGAAAGAGAATTAAATACAGAAGGATATGGCAACATGTAGTTGCCTGTTACCTGTCCTCCCAGGGAGAAGGACTATTTTGCTCCCTTGTTCTGATGTAAAATAGTAGCTTCAAGATGCCCCTGACCCCAGTACCAAATTGCAGCCAAATTATGTAGAACCACAGGATTTCAAGTGAATTGCTACAGACATACGTTTTCCCTTCCCACTAATGAGCATGGCAGCCAAAGCCCATTGGCCCCTGGCCACTCAGAACTCCATCAAACTGATGCAATCCTAAAGAGGAGTCGTGTCAGCTGGTGGCCTTTCAAGCCCTCCTTTTGAGGTCCCCAATCCAGGTTGCAGTCTGAGCCAAGGCCATTCAGGGTCCATAACAGTCAGGCTGAGGGAGGAAACTGCCCTCTCAGGCCATGTCCTTTGGGATGAAGGGTATTTATTAGCACCTGACAGTATTATTTCTGGAAAGCGTGACCTCCCCCGTGAGCATGGCTAGCAGGCATTCTGGCTTCTTAGCCAATCGGCTGCCATGCATATTTGGTCAAACGGTCAGAAACCATTGATTATTGAATTGTCCCAACTGAGGAATGCATCTGATCCAGAGGGAAGCTCCCGTGTCTTGACTAGCAGAGGAGGCTGGGAGTGGAGGCTGTTATTGACTTATGCATAAGAAATATACCTTATTAAGGGCAAAACGGGCCTTGGGCCCACCTACATTCTTCATTCTGGGCATCTGGAGGAGGCCTCAGTCTTCCCAGCTCCACTCTGCCTGGACATGCACGGCTGCTGGGTCTGGCTGAACAGTGGAGATGGCTAATAGAGAAAGACCTTCCACAGAGTTCAGTGTATCTAGAGTTGCTGGGCCCTGCCTGTTACACTAGAAAGATCCTCTAGATTAAGAAAGGATGGAGTCTGGTGGGTTAGGAGCCAGAACTCTTAAGGGCTTTGAGATGCCAAGTTCTCCAGGGTGGGAAGAAGCAGGGAGGCATTTCTATAATATAAACACTTCCCTGAGTCCTTGGGTAAATCAGGGGCATGACTGCGGCCAAGTCCGTGGGAACTGGCGCCTCTGTCTTTGTTGGAACTGTTCTCATCCTATGACTTGCATTGTGTTTTTCCAAATTTTTGCTGATATTTTAGTGTTCTCTGGTGGGAGGAGCCTTTGATTTGTTTCATGTTTGATTCTGAAAGTCATGATGTAAACACATCACAGCTGTGTCATTGTTATTCCCGTCAGCTCAGGGCAGGATGAGATGCTTTGTGGGATGCTCCATGAAGCTAGAGTTAGGATCTCTGAGAATGTCACTTCTGGCCATAAGGAGACTGGTTTGAATTACTCTGGTGAGACAGGGCGTGCCTGTCAGAAGCCTGAGATGTTTGTTCTGAGACGTTGAACCTTCCTGGTGGGGCAGCACCAAAACACAAAAGTAAGTCCTGGGAGCGGGATGTTTCTAAACCTCCATAACGTATTTAAGAACAAATGTGGGATACTAGAGTAAAATCAGGGAAGAGAGGATGTGGGGGGCGGTGGAGACACGGGATTATTTCCAATTGCACGGATCCACCCTTGCAGATAAGTCACTGCTCACTTCCAGAAAGGTTCATCTGTCTTAAGCAAGCCATAACTTGTTTGGGGGAGTTGCTCTTTTTTTTAATGGTTGCCTCGTTTTCAACTCCTGTACCTTTTCATATTGTCCATCAATTTCCTTGTTCCCCCAACTAAATTCTCTCTTCTGTCTCTCTCTCTCTCCAAACCTTACACTGTGGCCATCAGTCCATTTCAGCCTTCCAGTGCTGCACCCACTTCTTGGCTGACACACTTCTGCTCTGAGGTGACTGGTTTTCTTGCCAATTTTCAGAGAGTGGTACTAACCCCTGACCTGCTTTCTGCGCCCCGTCTCCCCCACTGCCCCCGCCGTGGCCTTGGTTGTGCTAACTGCGAGCGTCTTGCCTACTAATGGACTCATTCATTCGGTGGCATGGTTGGTGAACAATGTGGGGTGGTGTTCAGCTCGAAAGCGTTTCTGATTCCATCCCTCTGAGCCGGCTGCCCAGTCCACTCCAGGTGCATGGCCCACCTCCTCTCTATACTCCACGGCCTGCATGCATGCTTTTCTGGTTGCACTTACAAAGCCACTTACCTTCCTGGGAGGATTAACCTGGAATATGAGACTGTGCCATAGAGAGGGCCCTTCACCTTTGAAAAGAACTCTTTCATCTCTCAGCCTCTGAAAAAGCATATGCATACAAGCATCTTCTTCAGTTGCTTTCTAATATGAAGATTATCAATGTTATCAATCCACACCATAGGTGACTCTTTTTGGAAGGATTTAAAAAAAAAAAAAATATTTCTCCCAGGCTTCATCACAAGCTTGGCCCGGACTCTCTATTTTAAACACACGATCACAATTTTTCTAGTGACGCTTTCCTCCCCTGCAGCCTATACTTTCCCTCCCAGGGTTTTGCTTTGACTCTTCTGGTCTCTCTAGGCTCATAAAGCCCCAGAGGATACAGAAGCTTCAGCTAGAGCAGTCATCGTCACAGGCCAAGGGTGCCTTGGAGAGCAGCCCCCTTTCAATGCCCCCAAGCTCTGCTCAGAACACATCCCCCTGCTGACTCTGCCTGGAGCAGCAGCACACTCACATTGCTTTTAAAGAGAAACACCACACCTAGTCCGGTGGGGCTGTTGAAGGCGGCCTCGCAGTCCCGGGCTGCAGGTGCTGGTGTCCTGCATGCGGCCCAGAGCCATGCTGACCTCTCTGCACAGCCCTGCATGCTGCATTTTGCTCCCTTGTTGGTGCAGATCCCAGCCAGGACGAAGTCACGGTTCTTGTCTTATCTTCTCTTGCAGAGTCTCTCCCCTTTATAGAATGTCAACCAAAGAGTGCCCTCCTCCCCCCAGCCTCCTCCTTAGCTAGCCTCCCCCACCTTGTCACCATGCATGTTTGTGACCTTTGGTAATCCTTACAGTGCCACGTGGAACCCTGTATTTTGCACACAGCGAAAAATGTTTAGCTTTATTTATGGTATTTGATGCTGTACATGGAAATAAATATGGTTCTTTATAAAGCTC EMBV3_29303 TTCTGGATTCCCCATGGCTCCCCCCAGTTTCTTCCTTCCACCCTCATCTCCACCGACCTT Gene GeneID:531942|BCL3:XM_002695089:527_cdna Constitutive 0 NULL GeneID:531942 18 GENE BCL3 NULL B-cell CLL/lymphoma 3 EMBV3_43173 TTCCCACCCGCCTTCCGAGACCGCCCGAGTCCACGTGAGACAGAGCTATTAAGATAATTT Gene GeneID:618485|CCDC106:NM_001080334:190_cdna Constitutive 0 NULL GeneID:618485 18 GENE CCDC106 MGC139153 coiled-coil domain containing 106 EMBV3_06403 ACAGAATCTCTACCAACAGAGGCAGATGGGATTAGCCAGAGGGAGAGAAGCATGGAACAC Gene BVT0102_200798 + 0 NULL GK000010.2:21465710-21521554 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013066 TCONS_00016326 TCONS_00013064 TCONS_00016327 TCONS_00013061 TCONS_00013063 TCONS_00016325 2 XLOC_007986 XLOC_008701 Coding TCONS_00016327 XLOC_008701 Coding Coding HOMEZ 10:21465616-21496350 x TSS11343 1746 1 TCONS_00016327_1 300 15 0.94367617870042 3.002125167255e-197 8.266006663535e-23 1.64331464195324e-14 0 3.28217645618728e-61 3.57238297748242e-70 2.30109786878561e-46 9.04065568035155e-96 1.77424470146075e-05 2.09987061083989e-21 1.93860164647139e-78 4.03320902293709e-17 1.42911181533215e-175 3.99681114423328e-41 0 0.00300650695873117 0.00204709960451263 0.000269425298731553 1.69781795718624e-267 4.85314877322183e-131 3.25007627797066e-45 9.27219077050889e-11 0.00070417123478976 0.00198373153639552 0 3.37454321777243e-29 2.21518772614263e-93 7.2000520584811e-12 9.52972413731549e-05 0.000326119912131838 XM_005211442.1 C10H14orf164 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf164 (C10H14orf164), transcript variant X1, mRNA. 0.0 3092 100.00 0.981099656357388 NM_001282322.1 C14orf164 Homo sapiens chromosome 14 open reading frame 164 (C14orf164), 0.0 1618 81.13 0.97709049255441 TCONS_00016327_1 sp|A8MTL3|CN164_HUMAN CN164_HUMAN RING finger protein C14orf164; 6e-167 470 83.39 0.996666666666667 1 coding 0 0 0 0 -0.0142628611098832 0.88932730094886 -0.0219872810114503 0.684774718776822 CCAGCTGTTTGTCTCTCGCTGGTGCCAGACTCTCTATTTTTTCCCGCCATTTCCAGCTCTTCTTGAGAGCTGGTTGATTTCGGTGAGATCCGAGGCCCTCCGGGATCACTGCGGTCAAACAGAATGGATTGGTTTCACTGCAACCGATGTTTCCGAAAAGATGGGGCCCATTTCTTTGTCACCAACTGTGGCCATATTTTCTGTAAAAAATGTGTGATTCTGGAAAAATGTGCTGTTTGTGGAACTGCCTGCAAGTATCTGGCTCTTTCTGATAATCTGAAACCTCAGGAGAAGATGTACTTCAGAAACCCTGTGGAGACAGCTTTGCAGTACTTTAGTCACATCTCTCAGGTGTGGAGTTTCCAGAAGAAACAAACAGATCTCCTCATCGCCTTTTATAAGCACAGAATTACAGAGTTAGAAGCAGCCATGCAGGAGTCACAGCAAACACTGACCAACCAGGACAAAGAGCTGTCAGTCTTAAGGAAAGAGAATGGAGAACTGAAGAAATTTCAAGCCATCATGAAGGAATCTCCAAGTTGGTACCAAGGAAGCAGGTTAAACACACCTCGACCAGTGGGCATCACGTCTCCATCTCAGTCAGTTACTCCACGACCCATTTCTCAGCATAGTAGCCAAGTGGTCAGTCGGTCCTCCTCAGTGGAGTCTACCCCTTATAGAATGGCTGGCTTTAGTAACTTGGGACAAGGAGCCAGAGGTCTTCAGGGAAGGAGCACTCCGAGGGATTCTTTTACTGTAACGCCTTCACCAGCTTCTACTCACAGCCTATCTTATAGAGCTTCATCTGCCTCCTCTGGACAGGGGGTCTTTGCTTTCAGACCGTCTCTAAATAGTGGGGATTTAGGTCACACAAGAGTCTTCACTCCTAATAATCCAGGTCAGAGGCAGAACAGAACCACACTGGAGAGCCTTCCTAGTTTCCAGCTACCAGTCCTACAGAATCTCTACCAACAGAGGCAGATGGGATTAGCCAGAGGGAGAGAAGCATGGAACACTCCCAGATAGACCACCTTCAAGGTCTCACCTATGCATACTGCTGAAGTATGGACAGAGGCATCTCATACTCACTTAGGTGTGATGCCCTTGGAAAACGTACCCCTGCCTACACCCCTGTTTCATTGTATACTTTCTCTCAGTCTTTATCCTATACCTGCTGTATTACTTCCTATGCAAGTGATCGGGTCAGACCTTCAGGAAGATGTTTACTATCTCTCCCACAGGATACAGATAGCTCCCTTATTTCCTGAAACTTGAAACAAAGGTTATAAAAACAATTCTTGGCATCATTGGGGTGGTGTGGGGTGATATATTTATTAACCATGTTTTATTTCTGGATTTTACTTTTTAGCTTTGTATATATTCTCCCGTTGTCAGTGTTAACAAGCAATAACTCTGTTCCTTGGCCTATTATAATTTTTCTATTTCCCTATTGTTTCCTCTGTACCTAGATACTGTTAAATATGTTGATTTTCCTTTCTTTCTGTTTGGTAACAGTTGGAGACACAGGCTTGAAGCCCTACTAAAGTATACAGATAATGAAACAAAGAGGATGCCCTTTTATTGCTACTGTAACTCTGTTGACGTCATAAACTCTCAAATGGTGGGATAAGCAAAGAACACTACCACTGAGATCAAACATTTATTCTTCTTTGGGTAGTAAGGGGTAGAAATGAGGGATTAAATGGGTGGGCCATAGCAGGTATACCTTAAGTGAAAATACTGGAA TCONS_00013065 r 5' 0 TCONS_00013065 r 5' 0 EMBV3_22732 CAAGGTCCACCTAGAAAAAGAAATCGAGACCTACTGCCGCCTGATAGATGGAGAGGATGG Gene GeneID:521074|KRT27:NM_001075815:145_cdna Constitutive 0 NULL GeneID:521074 19 GENE KRT27 MGC139903 keratin 27 EMBV3_12145 GTCTGAGCCTAGTGGCCTAGGGACTCAGTCTGCACGTTCTGTGCCCATGGGTACATGTCT Gene BVV0101_037857 + 0 NULL GK000017.2:74365021-74366169 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078344 1 XLOC_047290 Coding TCONS_00078344 XLOC_047290 Coding Coding SLC7A4 17:74365400-74370013 j TSS58318 2983 1 TCONS_00078344_1 629 5 0.35429314830876 0 0 0 0 0 0 0 0 0 0 5.71452103082478e-06 1.13750860025945e-10 9.40053330055546e-11 0 1.26288864098065e-10 0.00212657573904021 0.00795305530618114 0.0232298754954861 7.93297730720957e-05 0.000441177649895777 0 0.000102851784074634 0.000347908477447224 0.000344035143999696 2.32264749690083e-06 0 0 3.65764077995775e-05 6.19256136221028e-06 0.000675193818539614 NM_001192042.1 orphan transporter Bos taurus solute carrier family 7 (orphan transporter), member 4 0.0 3910 99.77 0.730807911498491 NM_004173.2 SLC7A4 Homo sapiens solute carrier family 7, member 4 (SLC7A4), mRNA. 0.0 1739 79.64 0.654710023466309 TCONS_00078344_1 sp|Q8BLQ7|CTR4_MOUSE CTR4_MOUSE Cationic amino acid transporter 4; 0.0 888 73.73 0.995230524642289 3 coding 0 0 0 0 -0.00797330604908744 0.937404239955463 -0.004718414254932 0.920590746721263 TGGGAGGGCGCAGTGCGCAGAGTGGCGGCGGCGGCTGTGGCGGCGGCAGGTGCCTGCAGCTGGCTCCGGGCTCCTCTCTGCGCCTCTCTGCCCACGATGGCTCCGGGACGGCCCTGCGCTGCCGGCCTGGCACGCTTCTGCCAGAAGCTGAAGCGGCGGAAGCTGCTGGCGGACAGCAGCATGGCGACGTCGCTGCAGCGCTGCCTGTCCGCGCTGGACTTGACCCTGCTGGGGGTGGGCTCCATGGTGGGCTCCGGCCTCTACGTGCTCACGGGCGTCGTGGCCAAGGAGGTCACGGGCCCTGCCGTGACCGTGTCCTTCGTCGTGGCCGCCGTGGCCTCCCTGATGGCGGCCCTGTGCTACGCGGAGTTCGGGGCCCGTGTGCCCCGCACGGGCTCTGCCTACCTGTTCACCTACGTGTCCATCGGAGAGCTGTGGGCCTTCCTCATCGGCTGGAACCTCGTGCTTGAGTACGTCATCGCCAGTGCCGCCGTGGCCCGCGCCTGGAGCGGCTACCTGGACGCCATGTTCGACCACCGTATCCAGAACTTCACCGAGGCCCACCTGGGTGTCTGGCAGGTGCCCTTCCTGGCCAGAAGTCCAGACTGGCTGGCTGCAGGCATCATCCTTCTGGCCTCTGCCTTCGTCTCCTGCGGGGCCCGCGTCTCTTCCTGGCTCAACCACACCCTGTCGGCCGTCAGCATGATTGTCATCCTCTTCATCGTTGTCCTGGGCTTTATCCTCGCCCGGCCCAGCAACTGGGGCGAGGCGGAGGGCGGCTTTGCACCCTTCGGCTTCTCCGGCGTCATGTCTGGCACGGCGACCTGTTTCTACGCCTTTGTGGGCTTCGACGTCATTGCCGCCTCCAGCGAGGAGGCCCGGGACCCGAAGCGCGCTGTGCCCCTGGCCATCGCCCTGTCGCTCGGGCTGGCGGCCACCGCCTACATCCTGGTCTCTGCCGTGCTCACCCTCATGATCCCCTGGCACAGTCTGAACCCTAACTCTGCGCTCGCCGACGCCTTCTACCAACGGGGCTACAGCTGGGCCGGCTACCTCGTGGCAACTGGCTCCATCTGCGCCATGACCACCGTCCAGCTCAGCGGCCTCTTTTGCCTGCCGCGTATCATCTACGCCATGGCCGCCGACGGGCTGTTCTTTGAGATGTTTGCCTACGTACACCCCCGGACGCAGGTGCCTCTGCTGGGCATCCTGGCGTTCGGGGCCCTCACGGCCGTGGTGACGCTGCTGCTGGACCTCGACGCCCTGGTGCAGTTCCTGTCCATCGGCACCCTGCTGGCCTACACCTTCGTGGCCATCAGCGTGCTTGTGCTGCGGTTCCAGACGGCCTCTCAGTCCCGCTCGCCCAGCCTGGCCGGCTCCGGCCCGAAGGCCAAGGAGTACAGCTCCTTCTCTGACCACTTGGAGCTGGTGGGCGCAGGGCACGGCCCCGAGCCGGGGCGGCTGCGGCCAGCCCTGAGGCCCTACCTGGGCTTCCTGGACAGGGGCAGCCCCGGCGCGGCCGTGCGCGGGGCCGTCTGCGGGCTGGTGGTCTCCGCCATCGCCCTGGGCTGCGTGCTGATGCTCGGGCACTCGGTCCTACGCCTCCCCCTCTGGGGCTTCCTCCTGCTGCTGCTGTGCAGCAGCGTCACGTTTCTGCTCAGTCTCCTCGTCCTGGGGGCCCACCAGCAGCAACGCCTGAAGGACACCTTCCAGATGCCCCTGGTGCCCCTGATTCCAGCTCTGAGCATCGTCCTCAACTTCTGCCTCATGCTGAAGCTGAGCTACCTGACCTGGGTGCGCTTCACCATCTGGCTGCTGATAGGACTCTTGGTGTATTTCGGCTACGGCATCTGGCACAGCAAGGAGAACTGGCGGGAGCCGCCGGGGCTGGTCACCGCCCGCTACGTAGCTTTCTCCGACGGCAGGGTGGAGGAGACGGTGCGGGACCCCGGCCAGGCGCCGGCCCAGGGGCCTGGCAGTCCGTGAGAGCTGCCTGCCCTCCATTTAGGGCAGCTCGGTGGACTCGCGGGCCTGCCCACCTGAGGGGGCCCCTGGGACCCACGGACTCTAGTTTAGAGGCCGGTGCTGCCCGTCGCCCTTGGAGTGGGCGCGGCCGGTGCTGGGGCGGTGGACTCTGCAACCCCTTCCAGCTACTGGGGCCGGTGGGGAGGACGCCCTGTCTCGGGGACCCACAATAGGTATCGCTCAACCAGCCGTGTGGCCGTGTCATGTCCGTGGATCTGGAGGCATCGAGTCCTCACCAGCCCCTGGGAAGGGCTCGCTCGATTGTCAGTGTGGAACAGGGTCGTGAGGGTGGAATGCTGGGGTTCCGTGCAGGGGAGGTGCCAGCCTGGGACAGCCCTGGGCTGAGGACACTCAGGCCAGTGCCCTCTACCCTTCCGAGGGTGCCACAGCCCCCCATGCGCCAGCACAGAGGGGCAGAGTCAGGCTCACCTCCCGCAGGGGGTGCGCCTGACACAGGCGCCTGGGGCCCGGGGAGGCTGCCTAGAAGGGCAGCAGAGTTCCAGGGTACCCTTGTCTCCCTGGCTCCCGGAGAGCGTGGCGTGTGCCTGAGGCCCCCCTGGGGAGGCAGAGGCATGCCCGCATGAGCACACGCACCTCCAGACATGTACCCATGGGCACAGAACGTGCAGACTGAGTCCCTAGGCCACTAGGCTCAGACCCTGGTGCCTCCCCGGGCTGGGCGCCCGAGAGCCTGAATCCTCCCCAAGTGCCCTCTAGCTCTCCCCTGACCCCTGGTTCTTGGGAAGGGCCCAGGCCCAGCCCGCACGGCCCGTCGGTCTCCCAGGCGATGCTTTGCCCCCGCAGATACTACCAGCCTCATCCCTGCCTGTAAGGAGCATGCGAGAAACTGTGGCTTAGGCAGGCTTTACTCCCCGACCTTGCAGCCATCCGTCAGCGTTGTCTGGACCCACACACAGGCCCACACCCCTCGCCCTGGCCCTGAGGGCCCCCCTGCCCC EMBV3_01309 GTACCAAGGACCACCAGAGAATGTGGTCAAAGTAGCAAACAACACAGGCAGAAACCTGCG Gene BVV0101_013273 + 0 NULL GK000007.2:7919168-7923140 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25750 ATAATGTATTTTTGAGTTTGTGTTCTGAAGGCCTCTGTGCTGCTGGATTTGGGGGCGGGG Gene BVT0102_059295 + 0 NULL GK000021.2:21106764-21117497 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118767 TCONS_00118765 TCONS_00118768 1 XLOC_072725 Coding TCONS_00118767 XLOC_072725 Coding Coding ABHD2 21:20998662-21112630 = TSS89107 7702 1 TCONS_00118767_2 425 0.0985458322513633 11 0.932515552747725 1.01967397516014e-11 3.15637571868556e-10 2.04162808230431e-07 4.32194716088413e-06 0.000177642593601192 7.85681897525324e-08 1.29502957238472e-07 2.24023794288036e-05 1.74174670933336e-07 5.25073988282404e-06 1.21667037536258e-05 7.87516276185534e-08 6.25827457645694e-08 1.03813813948489e-07 1.12054553784619e-09 0.00150641885756597 0.00111827686441704 0.00672363415706599 1.57150924017556e-07 1.52818159146103e-07 1.20209717443316e-10 0.00102664350580595 0.00139411069785755 0.00243638941778495 1.73100127077053e-11 1.13904331338394e-09 1.29909026413832e-07 0.000980563953897345 0.00029783895789783 1.32612647842217e-07 NM_001015549.1 ABHD2 Bos taurus abhydrolase domain containing 2 (ABHD2), mRNA. 0.0 3200 99.89 0.230849130096079 NM_152924.4 ABHD2 Homo sapiens abhydrolase domain containing 2 (ABHD2), transcript 0.0 2798 82.77 0.348870423266684 TCONS_00118767_2 sp|Q5EA42|ABHD2_BOVIN ABHD2_BOVIN Abhydrolase domain-containing protein 2; 0.0 894 100.00 0.997647058823529 3 coding 1 1 1 1 0.00929726787934534 0.943891128002027 0.00886489381228633 0.846851196868573 GGCGGGGCCGGTAGCGGCGGGAGCTGCACTGGCCAGGGGTTCCGGCTGTATTTCCATGACCGCCGGCGGCAGCCGTGGAGCTGCGGGAGCGCGACCGGGGGCGAGCTGGGCCGCTGTAGTCAACCAAGCGCAGCTTTTAGGTTAAATCGAATAAGAGATCTGACCTGACCAGCCCAGCTGTTCAACTCTTCTTCAAGATCTGTTTGTATTTGCAGCAGAGAGGAACTGGTGACGTAGATCAAGATGAATGCCATGATGGAGACCTCCGAGCTCCCGGCCGTATTTGACGGGGTGAAGCTGGCCGCGGTGGCTGCCGTGCTGTACGTGATCGTCCGGTGTTTGAACCTGAAGAGCCCCACAGCTCCGCCCGACCTCTACTTCCAGGACTCGGGGCTCTCACGCTTCCTACTCAAGTCTTGTCCTCTCCTGACCAAAGAATACATCCCACCCTTGATCTGGGGGAAAAGTGGACACATCCAAACGGCCTTGTATGGGAAGATGGGAAGGGTGAGGTCGCCACACCCGTATGGGCACCGGAAGTTCATCACCATGTCTGATGGAGCCACTTCGACCTTTGACCTCTTCGAGCCCTTGGCTGAGCACTGTGTGGGAGATGACATTACCATGGTCATCTGCCCCGGAATTGCCAATCACAGCGAGAAGCAGTACATCCGCACCTTTGTCGACTATGCCCAGAAAAATGGCTATCGGTGCGCTGTGCTGAACCACCTGGGCGCCTTACCCAACATTGAACTGACCTCGCCACGCATGTTCACCTACGGCTGCACCTGGGAATTTGGAGCCATGGTAAACTACATCAAGAAGACATATCCCCTGACCCAGCTGGTGGTCGTGGGCTTCAGCTTGGGCGGTAACATCGTGTGTAAATACTTGGGGGAGACCCAGGCCAACCAAGAAAAGGTTCTGTGCTGCGTCAGCGTGTGCCAGGGCTACAGCGCACTGAGGGCCCAGGAGACCTTCATGCAGTGGGACCAGTGCCGGCGCTTCTACAACTTCCTCATGGCCGACAACATGAAGAAGATCATTCTCTCGCACCGGCAAGCTCTTTTTGGAGACCATGTGAAGAAACCCCAGAGCCTGGAGGACACAGACTTGAGCCGCCTCTACACAGCCACATCTCTGATGCAGATTGACGACAACGTGATGAGGAAGTTTCACGGCTACAACTCCCTGAAGGAATATTACGAGGAAGAAAGCTGCATGAGATACCTGCACAGGATTTACGTACCTCTCATGCTGGTGAATGCAGCCGATGACCCCTTAGTGCACGAAAGTCTTCTAGCCATTCCAAAATCTCTTTCAGAGAAACGGGAGAATGTCATGTTTGTGCTGCCCCTGCACGGGGGCCACTTGGGCTTCTTTGAGGGCTCCGTGCTGTTCCCCGAGCCCCTGACGTGGATGGATAAGCTGGTGGTGGAGTACGCCAACGCCATCTGCCAGTGGGAACGCAACAAGTCGCAATGCTCTGACACGGAGCTGGTGGAGGCTGACCTGGAGTGAGGCGCTCCCCGGACTCTGGCGTGCTCCAGCCGCCCTCCTCTGGAACTCTCATCCCTCACTGGCTGTTTTCAGGTCTCCCATCTCCCTCAGCGACCTGGATCTGACCTCACACCATCAACGGGGACCACCCACCAGACACACATGCGACCTGAAGTGGGTGGTGGTCCCTGGGAGCTCCAGGCTATTTTTGTGCTTAGTTACTGGTTTTGTCCATTGCATTTGTTAGCCATGGTGACAAGCGACAGGGTTCTCACCCTGCTGTCCGGTGTCAGCATCGGATTGCTTTCAAGCCAATTACATCTAGTTTCCCTATTAAAAAGCGTGTCTGAATAGCAGTTTTGCTTTGCCAATCAAATTTTCCCCAAGAGCAGGGAAGGATGGATGTTACGCTGTGGCAGTTGTATGTGTCCTGGATGTAGACCCTAAATAGAGCCAGTGCTGTAGCTACAGTTCTTGGGGGCCTGGGGCCCTGGGCCCCCCCTGCTGAGAGTGTGGTCTCTTACATGACAAAATTCCCTTGAGTCAGAAGCCAACTTTTTTCCTTACGCATTCCTGACGATGAGAGTTACCTGGGGCGCTTATTACAAATTCAGCCTCCCACGTCCTTCCCCTTGGAGGTGTTTCTGTGGGGCTGGGAAGGGGCCTGGGATTTTAATTTTTGACAAGTGCCCCAGGTGATCCTTATCACCAGGCAAATTCGAGAAACCCAATGGTGCGGAGCCTGTGAATTAGAAACGTCTTGGTAGCTCATGGTATCTCGTAGCTCCCAGGAGCCTCTGAAGCAGCAGTGCCTGTCATGTGCACCTGCCTTGATGTGATAGCCATGAGCAGTTTCAGCACGGGCCTGGGCTGGTGATGGAGACTTCAGGCCTGCCTCTGCCTCTCATTGGCTATATGACCCTGGACAAGTCCCTTTGAACTTTTCTTTCTTCACCTGTAAAATGCAGGAGCGGCTGGACCAGGCAGATTGCCGAGATCACTACCAGTTCTAAAGTTCAATGACAAACTCAGTTTACTGAGGTTTGAGAGAACTCCTCTCCAGGGGAGCCCGGGAGCTATTCTAAGCATGTCGATATCATCATTTGCCTTTCTTTTTTTTCTTTTTCCTGTCCCTCATTTCATATAAAGTGGTTTGGTTTTGTTTTTTAAAGTACTCATTTTATTTTTTTAGCCCACACACAGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGATTGTAGCCCACCAGGCTCCTCGGTCCATGGGATTTTCCAGGCATGAATACTGGAGTGGGTTGCCGTTTTTTTTAACCCAGTTCTCTCTAACTCTGGCTTTTGATACCAAACAGTTCAAAGGTTGGATCTGAGTTTGGAGAAATCGCTTTTCAACTGAAGAGGGTGTGATTTTGGAAACCGGATTTTTAGTTGAATAACTTATGTCCGTAGGCTATTGGATAGGTCTTTCAAGAGTGTGTCTTCTCAAATGAAAAGCCCACGCTGTGTTTCAAGTACTCCTTTCCTCCAATCCTGTGGTACTTGAATATCTAAAAACCCTGCACTTTGAAATAATCAGCAGTTGCTATCTGGAACTGAACAGAATTATGAGTGAAATGACCTAGATACTTAAAATTATTATTTCCCCTGCTTCTTCTACTTTGCTCTAGGACAGACAGGAGTATTGATAATGGATCCGTGTGCAGATATTTAAGGGGTAAAGGGAGCCATATGAGGGCCTGGGCGCGGACCCTCTTGGTCACAGGTGGTTATAGTTTGAGCCTCGGTCCTAGTCACGTGAGTCATGTGTTGTTTTCTGACAATCACCAGCTTATCCTAAATGGTAACATCAAAGACCACTGTTATCTGAAGAGACTGAGGTTTCTCTGGTCTCAACTTGGCTTTGGTTTCTCTCTCTCTCACACACACACACACACACAAATTCATCATCATGACTTTCCCCCCAGGTTGTTATTTTTCAAGTGCATATCTCATTCACGTGCTTTTAGCACAGATCGGCACTTTATCTTCTGCCCCTCGATTTGGAAGCTCGTCTTTTCCCCCTCTGTTACTTTTTCCTCCAACCTGCAACCACAGCTGTAATCGAGAAAATTCACAGTCATATTTCCTGCTCCTACCTTCCTGTCTCAAGACTTTTTGTGAAATCAGATAAACGAAGCAATAACCTAACGGGGCTGAATCACCATCCCAGGAAGCAAGAGGCTCCTTTTCATTTGCCTTAGGACACGTCCCTTGATCTGTTCCAACTATATAGCAGCCAGGTACCAGCTCCATTCAGGAGGAGAAAACAGTCCGGTTGTCATACACTTGGCGGAGACAGGGACAGGAGTCTGGAGCCTGGTGTGCCCGGCAGTTCTGTTGACCCACGGAGGAGAGGCAGGGCTCAGAGCATTCCCTTTGTTGCTGGACAACCGGATTTTACCCCACAGGACCGTGGGGCGCCATGCACAGCTGAAGTCTTTTTAGCGTGTGACTCTGAATGGCACTTTTTAGCTCACATGAAATCAACTGAGGCCCTTTGTTCAAGCTTCAGGCTCTCATGCATGGAAATGAGAGTGTAACTGTGGCCGTCTTACAGGAAAATTGTTGTTTGTTTCTGAATGGGAGCACAGAGGCATTCAAGCCTAATAAACAAGGGAGCAGCACTTTATATGTCGGTCAGCTTTTTCCTCCCTCCCGCTTGCCTGGCTTTTCTGTTCATTTCTGATGATAATGTGGCGGCTCTTCTTGCTCCTGAGGTCCTCTTGGGGTTAACACAAGGCTGAATTTTCAGAGTGTTTGCATATTATATTTTAAAATCAGGTTAAGGACATAAATTGTAATGGCCTAGATAATTCTGTTGCTGGAAGAACATGTTAAAAAACCAAACAGGCTTCTAGCAACATTTTTCCAAGTTTTTCTCCCTGCCTCTGTAAACAGTTTTGAAGACAACAGTGAGTAACTGATCCCAGTCAAGTTAGGATTGTGCATGTTCAGTCACTCAGTCCTATCTGACTCTTTGCGACCCAATGGACTATAGCCCGCCAGGCTCCTTTGTCCATGGGATTTCCCGGGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCAACGGGATCTTTCTGACCCAGGATCAAGACCTCGTCTCCTGTGTCTCTTGCATTGGCAGGTGAAGTCTCTACGACTGAGCCACCTGGGAAGCCCAAGTTAGGATTATCTGACTTGAAAAATGGTCTCAAGTCTTCTTGATGCACTTATATCAGTAGCAAGTTTAACAGTCTTAAAGAAAACCTCTTACCTTCTCTGATGTGAGTCTGTACCAATGATTCCAGGGCAGAATGAAGACAGAAAGTTATTTGTTGTCACTGTATTCCTTGAACCTCCTGCAAGCATTTCCCACATACCTTAGAATGGGAATATACCTGCCAGGGGAGCACCCTCTCCTGACTTGGTGTTAATGTCCCAGGGTCCTGGACACTTGGATTCTTCTCCTGTCTAAATCACACTGGTCTGTGGGCAATCTCTTCCCCTCTCTAAGCCTCGGTTACCTCACCTTAGACCATCTCCAAGTCCATTTCACCTGTTTACACATCCTTTGCCAGAACATTCCCAACTGGCCTTCTACAGCCCTTGTAAGTGGACACAGATAAGTCAAGGCTTCGGGCTTGTCTTGAGGGGACTTGGAGAGAGAGAGTGAGCTACTGCATTCAGCCTTTGCTGGTGAAGAACCTTGATTTTGCCCCAAGCCCCGTGTCCCTAACTAGCTTCTCTTCAGAGCCTCCATTGTCCTCCCAGTAGCCTTTCTGTGCCGAGGGCGGTCTCATGACGGGGACAGGTGCTGACCGTTGGAACAAAGCGAATATCCCCTTCATTCTGTGAGACTTGGGCAAGCATTGACCGTTCCCAGGGCAGGAATCCTTCCTGCTCAGACTTCCATTCTCAAACTGCAGCCTTCATTAGAGCTGAGATTTCTGGATAGTCGAGTTTGTCTGTCTGGCATCTGAATGAGAGCTCTCTTTGTCACTGTGTGGCTCATGATCCATTTTGCCAGCGCCTGGGAAGCAATACACGTGTTCTTGTTTGTGTTTGCCAGGCTAGCAGATGTCTGAGCTCTGAAGGGCTTTTCTTTTTCCCATGGCACTGATTCTGACTTAGCGCTGAAGATCACTGAAACATCACCTTGAGTTCAAAGAACTCTGGTCTTTGTCCTCTGAGGTAGGACAGGAGAGTTATCATATTAAGCATTTTGCTGCAGCGTCCGCTCACAATATCAGCTGGAATCATTTTTCTTTGCCCAGAAAGCCTTAACTTGCCTCTAGAATATCCCCTGGTAGGACAAAGCTATTTGGCTGCAGAATTGAAATTCTCCTGCTGTATTAGTCTGCAACAAAGCCACAGCAAAACCAGAGAATGTTACATTAGGCACCTCCCACCCCTTGACAATTAAGAGCAGTCTGGAACTGGCCAAACACCTGATGTCTCTGATGTCTTTCTTCCTTCTTGGCCTCACTCTGTAGTTCAAAGACTACTTGGATACTTCCAAAAGCCATGAAAAGTGGCAAAAGCCTGCGTGTGGCATTTAGTGGCCAAGCAATTGAGGGAAAGGTGTTCTTCTCCACATGTTATCAAAGCAGAGGAAAATGTCCCCCACCCCGCCCCGCCCCCGCGAATTCCCTGGTGGTCCACATTAAGACTCCGCACTCCCAGTACAAGGGGCAAGGTTCAGTCCCTGGTTGGGGAGCTAACATCCTGCATACTGCAAGCATGGCCAAAAAAATACAGAAGAAAATAGCCACCACCAACCCCCTTCACATACTAAGATAGCTTTTGCCAAATTGTATTTGAAGGGGAGCAGGCAGTGAGAACTGGAATGCTGTCCAAAACTGAAGCTGCTTCCTCTTTGTTCTCTGCTCCTGCTGCCTCGGCCGCTGTAGCCCAAACACCCCCAGCCCCTCAAGTGGCCCTTAGAGGCAGGCTGCAGAGCCTGGCTCAGCAGCAGTTCTCAGACCCCAGGACAGTGGACAGCTGCCCCTTTTGAAGGAGCCAGCCCCTCCTTCCCAACACATCATGTTTTCTGAACCATGTTTTCCCCAGCATGTATGTGGATAAAACATTCATCTATCTCAAATGAGTAAGCTGAAGTTAATTTCGAACCGCTGGATTGTCTTTTTAACTCAACTCCTGTCAATTAGTAACAAAGCCTATAACCTGCCTTCCCTCCCTCCTGGTGTCCCCATTAGCCAAGAAACCCATTGCCGCAAGTTAGGGACTGACCACCTATATAGCACCTGCAGAAGTACCCTTCATTGCCGTGGGGCATTCTCCTTCCAGGCCACCCACGTGCCGTGGCCAACAGTCCCCTAGCACGATGGCTGTGCCCGCAGTCCCGGCGCCAGTCACCTCCTTCCCGGGCTGTTTGTGGGGGGCGGGCCGAGTTCCCGGGCAGGCGTGGGAGCTAGGTTTCCTTTGGTTTTTGCTTTGGGCCTCTTTAGTCTTCCTAAAGCACAAGTCCTTGTAGACTCCTGTCCCCTCTTCTCCACACCAGTCTCAGACGATCTGGGTCTTGCCCACCGCCTCAGGAAGACCTTCACTGTACCTGAGCTTCTGATTTCTGCCACTGCAGCTGCCTTAGTGACACCAGGGGCTGGGGGGTGGGGGGTGGGGGGCCAGTTTGCATCTCCCCCCTTTCCTGGTTAGACTCCCATGAACCACTTTCTTTCTGTTGGCAAGGTGTGCTTCCAGGTTGATTTTTGAGAACCATCACTTACACATTCCTAAATTCCTGTTTTGTTTGAGTTTGGTTTCTTTGTTTGTTTTGTTGTTGTTGTTAATTTTCTGAAACTTCAAATGCTGCCCTGAAAATAATGTATTTTTGAGTTTGTGTTCTGAAGGCCTCTGTGCTGCTGGATTTGGGGGCGGGGGTGGGGGCAAGATATAGGATCCTCCAGCACTGAGGTGTTTAAGATTTGCAACTAGCAATGCAATTTTTTCTAAATATGAGGATATTTACCTTTATTAAGAAATTATACTAAACAGTGGTGTCCTTGATCATTTTATGTTCTCATAAATTACTTTTGGTTCTGTTTTGATTCTGTGTGGTGGTAAACAAAGATCATTACAAACAAAAGCTGTAATTTTGTTATCTTTGATTCAATGGAATTTCTTTACTTAAAAAAAAATAAAAAAGACTAAAAATGTGACC EMBV3_40705 GGATGGGCTTTTTCTCCTCCGTGACAGCCAAAGTAATCCAAAGGCGTTCGTCCTCACACT Gene GeneID:407210|Grb10:XM_002686637:40_cdna UTR3_Alt 3 NULL GeneID:407210 4 GENE Grb10 NULL growth factor receptor-bound protein 10 EMBV3_03362 AGATGCCTGCCTGCGTGCTCTGTGTTGCGTTTTGTGTTGGTTGTCCCCCCTGCTATTAAA Gene GeneID:784219|NUP214:XM_002691646:362_cdna Constitutive 2 NULL GeneID:784219 11 GENE NUP214 NULL nucleoporin 214kDa EMBV3_37775 TGCCTGGGTTCAAGAAGAGTGGAACTCCAGGAAAAGCTGGTGGCCAAGCTTTCACTTCAG Gene GeneID:505051|TAF1A:NM_001045908:20_cdna Constitutive 0 NULL GeneID:505051 16 GENE TAF1A MGC128979 TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa EMBV3_15986 CTCCTCTACTTAGTGGCTTTTTCTCCTGGAGTATCCAGGCTACCTCTGAGTCCTGGTCTT Gene GeneID:282090|THTPA:NM_174470:35_cdna Constitutive 1 NULL GeneID:282090 10 GENE THTPA MGC128756 thiamine triphosphatase EMBV3_17793 GACGCCTGCGGAGGTGCTCCAGTATTGCCTCAAGGATTACAGCCTGAACAAGAATTACAG Gene GeneID:782109|NMU:XM_002688261:185_cdna Constitutive 0 NULL GeneID:782109 6 GENE NMU NULL neuromedin U EMBV3_32058 GTCCATATTGTGAGAGGAGACTTCGATGAGGACATACACATAAATTTGAAGCATTTGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06866 GGAGACAAGCTCCGGTCTCCAGACTTCAGCCCGAATCGTGAACTGTGTCATAAGAAACAA Gene GeneID:510136|ZNF295:NM_001083659:12_cdna Constitutive 2 NULL GeneID:510136 1 GENE ZNF295 NULL zinc finger protein 295 EMBV3_12318 CAGAAGTGTCCTGCAACCCAGCAAGCCCCCAAGAGTAAATAGAAGTAAGGATGGACTGAG Gene GeneID:788280|SPRR4:XM_002686026:193_cdna Constitutive 0 NULL GeneID:788280 3 GENE SPRR4 NULL small proline-rich protein 4 EMBV3_14715 AATATAGATATCCATGCATCAGATAAAAGTGTAATATAACATTACGAAGCAAGATGGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28226 GGGCCCAGCTGCTTTTCTGTTCACACTTCAGTTTACCACAGAGACAGACCCTTAAAACCC Gene GeneID:100299595|LOC100299595:XM_002696795:524_cdna Constitutive 0 NULL GeneID:100299595 21 GENE LOC100299595 NULL similar to phosphofurin acidic cluster sorting protein 1 EMBV3_32540 CTGCTTTCCATCAGTGGTCATGTATAATTTTCTTACCCTACAGCCCCATTGCCTACCTTG Gene GeneID:510568|XPO1:XM_002691374:244_cdna UTR3_Alt 2 NULL GeneID:510568 11 GENE XPO1 NULL exportin 1 (CRM1 homolog, yeast) EMBV3_34588 ACAGGCCAGGGCCAGCGACACCTCCGCTTCCTCCCCAACCAGATCCCTCCAGAGAGGTGT Gene BVT0102_398176 - 1 EMBV3_14639 GK000015.2:39730869-39778549 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059066 TCONS_00059065 TCONS_00059068 TCONS_00059063 TCONS_00059064 TCONS_00059067 1 XLOC_036254 Coding TCONS_00059063 XLOC_036254 Coding Coding BTBD10 15:39747983-39841396 j TSS44378 4310 1 TCONS_00059063_4 475 10 0.953967370359269 0.00196881409251222 0.00186320476394778 0.00253947739048384 0.00280430635333019 0.00420972238271939 0.00191179474993422 0.00209125626785062 0.00172162353456041 0.00164278564109742 7.79561498180363e-05 4.40463235699e-06 0.000210681990104383 0.00052396992077225 2.27727845380391e-26 0.000135319412113851 0.000304600360049805 1.33168466983695e-151 1.03093879070901e-70 0.000669713940561015 0.00136571945930756 0.000994891760199625 0.000913526591155448 1.9552983888627e-32 5.99048713900467e-40 0.00162710370370823 0.000683661692598672 0.000207881414232291 6.06428064312339e-05 3.64432184897342e-72 9.45039952045265e-19 XM_005215917.1 BTBD10 PREDICTED: Bos taurus BTB (POZ) domain containing 10 (BTBD10), 0.0 4616 100.00 0.593503480278422 NM_032320.5 BTBD10 Homo sapiens BTB (POZ) domain containing 10 (BTBD10), mRNA. 0.0 3276 91.84 0.531090487238979 TCONS_00059063_4 sp|Q9BSF8|BTBDA_HUMAN BTBDA_HUMAN BTB/POZ domain-containing protein 10; 0.0 857 97.68 0.997894736842105 0 coding 0 0 0 0 0.0718930238972242 0.666725633360776 0.0482371327986232 0.527618977797666 CTTTTCCTGAACTCAGACCGGTTAATAACCGCCAGCTGAGCCGGCAAAGGCGTTCGGAGTTCACCCCCTTGAGGAAAACGCTTTCCTTGAGTAAACTCAGAGTCCTTAGGTATTTCTCCAACTCTGGGATGTCCGCTTTTTTCTAACGGTAACAAGAAATCAAGGGAAAATGTGGTATTAAAAGATTTGGAGGTGACAGCTCGCAGCCACTCAGGCTCGAGGATCGCAGTAGATTCTGAGCTGACGTCTGTGGACACAAGCGCTTCCCATTTTGTTGCACCAGCCCCCAGGCTGAGCGCCCACCCACCCCAGGCTGCCACTCCCTCAACCGCGGGCACCCTCTGCGCCCCGCCCAACTACTGGGCGGTGAGGCTCCATTCTCGCGACGACTCAGCTAATCTCGCCTATTCCATCTGAGGGATCTCGCGAGAAGCAGCCTGGAGCCGGCCTGTAACCTGCTGGGGCGGCTTTAGTAGCCGCAGCCGCTCGAGCGGCCGCAGCCACAGACACCTCTCTGGAGGGATCTGGTTGGGGAGGAAGCGGAGGTGTCGCTGGCCCTGGCCTGTGCCTGGACACTCAAAGGGGACTACAGATGAAGATGGAATCCCAAAGAACATCCAAGATTTAATGAGGTTGAAGAATTGGGGTGATGGCACAAGACTACTCAGGTTGTGGGTCTACATGTGTGCTTTCAGAGCAGTAGTGTGAGGAAGCTTGCAGTGGGATGGCAGGACGGCCTCATCCCTATGACAGTAACTCCAGTGATCCAGAGAACTGGGATCGGAAATTGCATAGTAGACCTCGTAAACTTTATAAACATTCAAGCACTCCCTCACGTGTTGCTAAAGGAGCTGTCGACCACACCAAAATGAGTCTACATGGTGCTAGTGGGGGACATGAGAGATCAAGAGATAGACGAAGGTCAAGTGACAGATCACGAGACTCATCCCATGAAAGAACAGAATCACAGCTCACTCCTTGTATTAGAAATGTTACTTCTCCAACACGGCAGCACCATATTGAACGTGAAAAAGATCACAGTTCCTCTCGTCCAAGCAGTCCTCGTCCCCAGAAAGCGTCTCCAGATGGATCCAGTAGCAGTGCTGGGAACAGCAGCAGAAACAGTAGTCAATCAAGTTCAGATAGTAGCTGTAAGACGTCTGGGGAAATGGTATTTGTGTATGAAAATGCAAAAGAAGGAGCTCGGAATGTAAGAACATCAGAACGAGTGACACTTATAGTGGATAACACTAGATTTGTTGTAGACCCATCCATTTTTACTGCACAGCCAAATACAATGTTGGGCAGGATGTTTGGATCTGGCAGAGAACATAACTTTACACGTCCTAATGAGAAGGGAGAGTATGAGGTGGCAGAAGGAATTGGCTCTACAGTATTTCGAGCAATTCTGGATTATTATAAAACAGGAATAATCCGTTGTCCTGATGGCATATCTATTCCTGAATTGAGAGAAGCTTGTGACTATCTTTGTATCTCTTTCGAATATAGTACTATTAAATGTCGAGATCTCAGTGCCCTAATGCATGAGTTGTCAAATGATGGTGCCCGCAGACAGTTCGAGTTTTACTTGGAAGAAATGATCCTGCCTCTCATGGTAGCCAGTGCCCAGAGTGGGGAGCGCGAGTGCCACATAGTGGTGCTTACGGACGACGACGTTGTTGATTGGGATGAAGAGTACCCACCACAGATGGGAGAAGAGTATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTACATTGAAAACAGAGATGTGGCCAAATCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGACTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGGGGCCGCCCCGAAGTGATTTACAACTATGTCCAAAGACCCTTTATTCGAATGTCTTGGGAGAAGGAAGAAGGAAAGAGCCGGCATGTAGACTTTCAGTGTGTGAAGAGTAAATCTATCACCAACCTTGCCGCCGCTGCCGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCGACTCCGCAAGTGGATGAGCTGGATATTCTACCCATCCATCCCCCTTCTGGCAACAATGACCTCGATCCTGACGCACAGAATCCGATGCTGTGACGGTGATGTTTCTTGAAACCATAGCATGCTACTCTTCACAGTGACGCTGTACTCTCCTCATCCTGCACTGCAAGGCCACTCTCTTCATTGTGAGATGCACAGAACGATGTTTAGGATATTGCAGTGTAGGCTTTTTTTAAAGACCAAAGGTAGCTGAATGGTTTTTTAAATGAGTACAACTCTAGCATCTTGAGGTTCCAGTTATATAAATGTATTTGTTTACCAGTAGGTTTGTGAAATTGGTTCTTTGTATGGGGGACAGTCCTTTTTCACACATCTAGATCTTCCCAGAAGTGGTGGAAATTGGCAGCTGGGGTACTTTGTCTAGATTGATATTCATCACACCCCAGATAAAATGTAGAACATTATATATAGTTGCACTTTATAAATGGTGGTTAAGTGGAACTGTTCAAGCCATTTTTATAGTTGTGATGCACAATATAATTTAAATAAGTGCTTCTATCAAAGTATTCCTTCAGTAAAATGTATATAGTTTGCTGCCCATGATGAGCAAAAATGAGTATCACTGGGCTTATTTGAATGATGAGGATGAGATTCAACCATATCTTATCAGTTATCTCAGTGCCGTTTTCATCCTTTTCAAGTGTCACATGCAGGGAGTGTGAACATCAGAGGTGGGTTATTATCCGGTCTGCCTTACCCTTAATCTGTTCACAGATATTTATTTACTAATGATTTTTTTGAAAGTTATGGGATAGGAAAATGAAGTGTTTGCTCTTCATTTACTAAATGATTGTAAACTCGTTTTTCATCAAAATAAAATTCCATTGTTTTAATGTTTCTGATCTTTATAACCATCTTGACCAGATTTTGAGTCTTGTATTTTGCAGATTTCCTGTTTTATTGGTGTCAGTATAATTAGAAACCAGGAAGTAGCTCAAGGAACTCCTGTTTGATATATGTGTGATGAGGCACTTATATTCTCCACTAACTATAAAATACACTATAAATCCAAATCATTAGAGCTGAAAAGGGAATATTTTGTAGTACAACCTGATACGAAGATAAAATACTTTTACTAGGTTCTATAGTAACCTTAAGTTTCAGAGCCAAATTCTGATACTAGTTCAGTGCTTTCTTCACTATAGTATGCTGTTCTGCCAAGCAAATTGTTCATGCATATGTTTTTGTTTTGTTTCTTAATATTTTGTGACTCAGTTCAAGAAGAAATCAGAAGTATTTAGATGCTTTCAGTCTGGGGTCACTTAATGTCTGAAGCCATACAACTGGTAGTAGAGAGGAGTTGTATTAGAGAAGCCAGTTTGTTCTGTCTAATCTTGAGTTTGTAATTTCAGAGGACTTGAATGAAGTTTGTGTTTAAGCAGTAATATCTTTGTTCTCACAGAAACTAAAATTACAGTACAGCTAAACACGTGACACAGGAAAATTATGTATGTCCTAGAATTTTTATGAAGACCAGAAAGGCACTGTAAATGTTTTTGGTGTGGATCGTCCATAAACACCCACCATGGAAAATCAATGATCTAGCCCTATAGCATTTTTTCCTTAATTATTTGAAATTTGAACAATATTTATAGAACAAGGGAAACATTTATTAAAAATATTTAACTAATACATTATACTTTAACCCATATTTATAGTAAAGGATTCTTACAAGGAAGAATAAACAGTTTTATGATACAATTAGTATAAGAAATATCCACATGGGGAACTTCTTTGTAGTGTAAAAACACCATACATCTGAAATGACCATTTGCATATAAAAGCTACCAATGATGCTTCTGTGCACAATGATTAAAAAATTCAACACAAACAGAATCCAAAATATACAATTAATGCAAGCTATCCACAGCTAGCCCAATAATCAATGATGAGGAAACACTGGAGCAGGCTTTAGTTCCACTTTTTCTGAAGTTACACATTGTTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGACAGTACATAAAAGCTGTTCTCTCCTTATCCAGTAAGCTTCACAGACTGTATAACTCCATCAGTAATGCACTTTGATACTGTAGCTGTCGCCAAAGCAACATATAGTGTTTACAGCGGCCATGGCAAGTCGCTAAAGTCAACAGGGCCACCAAGCCCAGCATCCGCTTCCAAGAGGCTCATTATGACAGCCATTGCTGCTTCATCAT EMBV3_05419 AGTTGGTTGCATGAACTTTGAAGGGCAGATATTACTGCACAAACTCTGCCATCTCGCTTC Gene GeneID:521378|CITED2:NM_001075819:11_cdna Constitutive 0 NULL GeneID:521378 9 GENE CITED2 MGC140571 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 EMBV3_43557 CCAGAGACTCGTCAGCCAGGCTCAGAACACATGTCAAACGCCTCTCCTTTTGGCTACATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42557 GCAAATTTTGATTTTCCACTCTAGAACCGGAGGAGACTTATCTCAGTGACCAAGGAAGGT Variant GeneID:281093|CRYZ:NM_174025:2_cdna 52^203 3 EMBV3_27565 GeneID:281093 3 GENE CRYZ NULL crystallin, zeta (quinone reductase) EMBV3_18374 TTGCAGAAACCGAGACAAAAATGTCCCCCACGCCCTCCCAAAGCAGCAAGAAACCCTCAT Gene BVT0102_027430 - 1 EMBV3_17801 GK000025.2:17585735-17588927 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32027 GACCAATTTAGGCTTAGCAGTTACCTGGATACATCTGAGAGAATATTTTTATCTGAAGAA Gene GeneID:782848|KIAA1429:XM_002692817:148_cdna Constitutive 3 NULL GeneID:782848 14 GENE KIAA1429 NULL hypothetical protein LOC782848 EMBV3_01061 TGAAGCTGGTGAGGGGCCACTGTCTGGTATCTATACTTTCACTACAACCAAAACCCCACC Gene GeneID:519208|LOC519208:XM_002699995:99_cdna Constitutive 0 NULL GeneID:519208 X GENE LOC519208 NULL similar to Gene model 784, (NCBI) EMBV3_39207 GGGTCACACAAGGACCTCGTGTTCTAGACTTAATATCTGCATAGGAAGTGCAAGAACACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18761 TGAACCACTTCTTCTGTGACATCTCCCCCATCCTCAAACTGGCCTGCACGGACTACTCAA Gene GeneID:618817|LOC618817:XM_002686588:47_cdna Constitutive 0 NULL GeneID:618817 3 GENE LOC618817 NULL similar to olfactory receptor 1416 EMBV3_38395 GGCCCCTTAGAATGGCAAGATTACACTTACAAAGCGGTCAGCGTAACAGCCAGTGACAAG Gene GeneID:525263|GEMIN6:NM_001046278:125_cdna Constitutive 1 NULL GeneID:525263 11 GENE GEMIN6 MGC137687 gem (nuclear organelle) associated protein 6 EMBV3_19135 CCATTACCTAGTCATGAAGAAGTTACCACCCACCAAGCCCTACCTAGTGTTTCCCATCCC Gene GeneID:538860|PDE12:NM_001076133:259_cdna Constitutive 0 NULL GeneID:538860 22 GENE PDE12 2'-PDE MGC142764 phosphodiesterase 12 EMBV3_27271 GCTGTGTCCACTGCTCAGGTCCTTGCCCTCCCCACCTCACTTCTGCTCCAGAAATAAATG Gene GeneID:540738|TMEM53:NM_001038572:283_cdna Constitutive 0 NULL GeneID:540738 3 GENE TMEM53 MGC134325 transmembrane protein 53 EMBV3_32115 TCTCAGCCCCAAGAAGCCTTAAAAGACAGATACACTGTCTGAAAATGGATGGTCGCTGTG Gene GeneID:100296670|LOC100296670:XM_002698623:23_cdna Constitutive 0 NULL GeneID:100296670 27 GENE LOC100296670 NULL hypothetical protein LOC100296670 EMBV3_16174 TGCCACGTCCCTTAATCTGAGCCCTTCCTTTCCTTATCCCCCAACGATCCAGATATATGC Gene GeneID:787004|SMAGP:NM_001083793:125_cdna Constitutive 1 NULL GeneID:787004 5 GENE SMAGP MGC151756 small cell adhesion glycoprotein EMBV3_08036 CAACAAGTTCAACAAATCCTACAATGGCACAGTGGACTGACAGCTCCTTCCCCTCAGAGG Gene GeneID:282564|ITGB5:NM_174679:14_cdna Constitutive 0 NULL GeneID:282564 1 GENE ITGB5 NULL integrin, beta 5 EMBV3_24722 TCCCACTGGATAAGGCTGTGTCTGTGTTCTATACTACCATCACCCCGATGCTAAACCCAC Gene GeneID:617084|LOC617084:XM_002690680:275_cdna Constitutive 0 NULL GeneID:617084 10 GENE LOC617084 NULL similar to seven transmembrane helix receptor EMBV3_31904 AGAGCCAATTTCTAGAAGAAGGTATTGGAGGAGCAGTTCCTCATCTCTCACCGGAGAGGG Gene GeneID:504616|STEAP2:NM_001077847:3_cdna Constitutive 0 NULL GeneID:504616 4 GENE STEAP2 MGC155092 six transmembrane epithelial antigen of the prostate 2 EMBV3_40317 GCTTTCTTCTGCCAGTCGAGAGCACCAAGCCCCAGGGACCCACCCATTGAGCTTCTGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11815 TGCGCGGCTACAAGTGGGCCGAGTACCACGGGTTACGGTCGCGCCCAGCACTCTGTCTCT Variant GeneID:618691|PHPT1:NM_001076516:50_cdna 213^337 1 EMBV3_36084 GeneID:618691 11 GENE PHPT1 MGC133682 PHP14 phosphohistidine phosphatase 1 EMBV3_20732 CCGACGGAAAACATAGACGGCAGACGCCACATTGTTGGAGAGGTTAAGAAGTATCTGACT Gene GeneID:512405|OCLN:NM_001082433:78_cdna Constitutive 0 NULL GeneID:512405 20 GENE OCLN NULL occludin EMBV3_26656 TGGAGGCTACCTTGCAGCAGTGCTTGGAGGACACAATGGAGAATCCATGTACTATTGGAG Gene GeneID:786391|LOC786391:XM_002688395:51_cdna Constitutive 0 NULL GeneID:786391 6 GENE LOC786391 NULL similar to hepatitis B virus x-interacting protein EMBV3_43309 GGTAGGCTACAGTCCATGGGACACAAAGAGTCGGACATAACTGAATGACTTTCGTGGATC Gene BVT0101_072476 + 0 NULL GK000007.2:30866552-31140386 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11180 GTAGACTACAGAAGGGACTGGTAGGAGTCTGCACTGCTCTGACTTCCCTCCTTTTGGTTA Gene GeneID:540118|FAM110A:NM_001014961:1243_cdna Constitutive 0 NULL GeneID:540118 13 GENE FAM110A C20orf55 MGC140351 family with sequence similarity 110, member A EMBV3_31112 CAGACTGATCTCCGCTCATTAAGAGGCTTGTCTGTCTCCCCCCAGCCAAAGGCGGCGGGT Gene BVV0101_037126 + 0 NULL GJ060158.1:1-7412 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25139 GGCACTTTGGTACGGAACATATTTATTGCCTCCCTGCGTGTGTGCCTGTGTGTGAGGAGT Gene GeneID:789472|SYDE1:XM_002688603:364_cdna Constitutive 0 NULL GeneID:789472 7 GENE SYDE1 NULL synapse defective 1, Rho GTPase, homolog 1 (C. elegans) EMBV3_42133 ACTGACGTTCCTGGCGAAGTACCGCGAGTTCCCACATCCAGGCCACTCAAGGTATCATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21401 TCCGGAGGCAGCACTTCTGGATCCTTCCTAAGCAAATTGTATTTGTTCATTGCTTGCCAG Gene GeneID:507488|RAB21:NM_001075317:2_cdna Constitutive 0 NULL GeneID:507488 5 GENE RAB21 NULL RAB21, member RAS oncogene family EMBV3_34276 GCAATGCGAACAATGAGTTAACAGTCGCCTAGAAACCACATATCCCAGAGTGCCATGGTC Gene BVT0102_100744 + 0 NULL GK000017.2:55187333-55192988 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17041 ATTGTTCTTAGGAATGACCTCCGTGTGCTTGGGCAGAGGGGAAGAAGGTGTGCCTGGGAA Gene BVV0102_181016 + 0 NULL GK000003.2:25465320-25664369 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26094 CATCCTCACACTGAGCAGCCCACCTCTGCCTGTTGTCAGCGTCACACTTCTCAATTACAT Gene GeneID:527607|EFTUD1:XM_002696606:100_cdna UTR3_Alt 2 NULL GeneID:527607 21 GENE EFTUD1 NULL elongation factor Tu GTP binding domain containing 1 EMBV3_42617 AATGGGAACCAGGCTGGGGACAAAGAGGCCAACTAGGAGCTGTTCATATCCCTCAAGATA Gene BVV0102_383532 - 0 NULL GK000005.2:69892513-69971125 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36025 TGTGAAGGGGAAGAGGACACTGGGAGAAAATATTGCTGATAATGGAGGGCTGCGACAAGC Gene GeneID:536029|PHEX:XM_002700356:32_cdna Constitutive 0 NULL GeneID:536029 X GENE PHEX NULL phosphate regulating endopeptidase homolog, X-linked EMBV3_29381 CCCTTTCAGGCCACGTTTCTACCCAGTGTCTTCTTCCCAAATGCTGCCTGGGCCCCATGA Gene GeneID:510681|BSPRY:XM_002689938:95_cdna Constitutive 2 NULL GeneID:510681 8 GENE BSPRY NULL B-box and SPRY domain containing EMBV3_40947 AAGCAGCTGGAAGATGGCCGCACTCTTTCTTGATTACAACATCCAGAAAGAGTCGACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08200 GAAAGTCTGCATTGTAGGCTCTGGCAACTGGTAGCAAGAACCAGGCTCATGGACAGCTTC Variant GeneID:525042|GPD1:NM_001035354:83_cdna 78^535 3 EMBV3_16599 GeneID:525042 5 GENE GPD1 NULL glycerol-3-phosphate dehydrogenase 1 (soluble) EMBV3_15951 TTCCCTTCTCAAATCTCAGCCTCATGTTGTTCTTTGTTACTGTCAGAACCTGGTGAGTTG Gene GeneID:282320|PPP2CA:NM_181031:5_cdna Constitutive 0 NULL GeneID:282320 7 GENE PPP2CA NULL protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform EMBV3_25314 TCTCCTTCTACCTTCCCCAGCAACCTTGGCTCCCTTCCCCAGCAACTGTTCTATTGCAAA Gene BVV0101_048495 - 1 EMBV3_01907 GK000002.2:43530362-43543015 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105157 TCONS_00105156 TCONS_00105155 TCONS_00105158 1 XLOC_062516 Coding TCONS_00105157 XLOC_062516 Coding Coding ARL6IP6 2:43542627-43584752 j TSS77680 2805 1 TCONS_00105157_3 153 3 0.933482100465293 0.00103251570311706 3.65440789037194e-05 0.000226072816945228 0.000118587373383972 0 4.72517243757397e-05 0.000145717732567428 1.80202336863454e-05 0.000126941943506694 0.000715144278060025 0 5.27743069133482e-115 7.42998437022871e-05 5.17012018940564e-05 7.08279243473387e-05 0.00134100353373085 2.99766931127708e-213 0.000225703738877544 0.000108745377861821 8.92835933876334e-05 8.36418289460326e-05 5.54029607301295e-05 0.000349884268980097 0.000888721374037949 0.00036534800265713 0 0.00016007650226768 0 2.5436792943631e-05 4.20324925752604e-06 NM_001034281.2 ARL6IP6 Bos taurus ADP-ribosylation-like factor 6 interacting protein 6 (ARL6IP6), mRNA. 0.0 2587 99.93 0.511942959001783 NM_152522.5 ARL6IP6 Homo sapiens ADP-ribosylation-like factor 6 interacting protein 6 (ARL6IP6), transcript variant 1, mRNA. 0.0 971 73.85 0.544028520499109 TCONS_00105157_3 sp|Q3MHM8|AR6P6_BOVIN AR6P6_BOVIN ADP-ribosylation factor-like protein 6-interacting protein 6; 8e-107 308 100.00 0.986928104575163 0 noncoding 1 1 1 1 1.52420391286987 0.0183116971133884 0.0662427154454577 0.379046497903668 GGGACGGGAAGAACAATGTGAAAGGGAAGGCGGTATTGGGCCTAAGGGAGATGAAGGCGCCAGGCGCTGAGTTTCCGTTACTGAGGGAAGCCGGGGGAGAGTGCTGGTGTAGAGAAGATAGGAGAAAGCAAACAGGTTCGGGAATGTGTGTTGGCGGGCGCTAGGACCGGGCGTAGAGGAGGTGCGGCTTTGGGACTGCGAAGGCACGCGCTAGTTTAGAGGTGACGTGAAGGTGGCGGAGGTTTTTGGCGGAGAGACTAAACGCTGCACGGGGAGGAAACTCGGCTCCCTTGGGCCTCGGCTCGCCTTCCCTCGTACTGCTTGCGGGTAGTGCTCTGGTCCAGGGGCGCTCAGCCTCTCATCGGCCCCACGGCACTTTTCTTGCTCCAGCACGCACCCTTACGCACCCCTGCGCGCCTGGGCCTAGTGGTGGAGGCCGCAGTGGGCCTGGCTGCTCATTGGCTACTGCGACCGCGGGGCGGGGTAGGTGGGCGACGTTGGACCTCCGAGGGCCTGAGTGTCTTTCCCGCCATGTCGTTTGTGGAGAGCGGGAGACGTTCGGCCCCTCTGCGCCGCCGGCCCGGCACCCCTGTCCCGTTCGCTCGACCTGCGTATTCCGTTTTCAGTCAGGGAGATAGCTGGGGTGAGGGCGAAGTCGAAGAGGAGGAGGGATGCGACCAAGTGGCCCGTGATTTGCGGGCGGAGTTCTCGGCCGGGTCGTCATCGAAACTCAGAAAGGACCCGGTACTCCAGCCAGATGGGGACGGATCTCCGGTTCTGCCCGATAAACGCAATGGCATTTTCTCGGCGGATGCGGGTGGTAAAGCCCTGGCTCGGCGCTGGCCGGTCCAAGTCCTCTCAATTCTCTGTTCTCTGCTGTTCGCCATCCTTCTTGCCTGCCTGCTCGCCATCACCTACCTGATCGTAAAAGAGTTACATGCTGAAAATTTGAAGAATGAAGATGATGTAAACACTGGACTGTTAGGAAAATGACCGGGCATTCCTTCCACATGGGCTACAGTATGGCAATTTTGAATGGCATTGTAGCTGCTCTTACTGTAGCTTGGTGCCTCATGTAAACCTGCACTGAAGCAAAGTACTGGACAAAACTTAGTCATGATTACTTTGTAATAACAGAACATCACTGCCTATTCAGAAGACCAAGAAAGTTGCTGCTCATTATGTGGTTCAGATATAAGTCATATCATCATCATTATGGAGGACTTTTTCTAGAGCCGAGGCATTGGGAATATATAAGTATTCAGTTTCAAGTAGTTCTTAAAAGTATAAGATGTTTACCTCATCTTTTTACTTTTGTGTGTGTTGTCCTTATAAGTTGTAGAAAACATTTTAATGGAAATCAAACTCAGAAACCTAGATGCAGAACATCCTGTATCAAAGCCCGCTTTTCCATGTATATACTACATTTTTGCTAAGAAATACTGATAGTACTTTTGAGATAGAAATATTTCTTATTTATTCATTGTATTAGAAAAGCAAACAATGCCTACTACTTTGACATTTTGTAGAAGCTACTTTTAAATCAGAATATTTAGTTTTCAATATATAATCAATAGAAGGTGCACTTATTTTTTTAACGGGGTATGGTTCTTTGGGTTTTTTTGTTTTTTTGTTTTTTTTTTTACATACTTTCCTACTATATATTGAATTTGTATCTTTTTAAATTGTTGCATCTAGGCAAATGTAAATGTTATTTTTTTATCTGGTGCAAATCTAATACCTTCCATTTGTAATAAGTATTTTGTCTTTTTAAGAAAAGCACATTGGCCTCACATTTAAAAATAAGTAAACTTATTTTTAACAGAAAAGTAACTGAAAAAAGTTTAAGTATTTAAGGAGTGATAATACTGAGGAAATTTAAAGCTGTCCCCTCTTTCCATTTTCACAATGCCAAATGTTTATCTTGGTGCATATGTGGTTACTTCAACAGAACCAATACTATCTTGTTTTTAATAAATATAGACTTGACATTTTTATATTTAGGAATGCTTGAATTAGTTTGTTTTTAGTCTCCAAAATTTGGTTACCAAAATAGAACAAAGTATTTTGATACAATGTGTGTACATGTATAATTTTTTATGTATAGTTTCCTTATTTTCCTATTTAAATGTTCTTTTGTAATTGTGTGTTTTGTTTTTGTTCTCATTCTAATTAAGCCTTAATTGTTCCAATTCCTTTCTAAATACCTGCTTAGGAATAGTCACTTGAATTTTAGAAAGATGGACTATTTAAAATACTGTTTTCCCTGGCCATAGGAAAACCTGCCTTAGGATAGCACTGTGTAGCAAATTTAGTAATAAGCACTGCTTATTCAGGCCAAATGGGAAATGAATATATACATTTGTTCATGTTACCTGCTAATTGTTGTTACTGAGTAAATGATTTAATAATGTTTCTAAAAGTCTTAACCTTTTTTTTCTTTTTACCATTCAAAAACCTTTCATTGGAAATGCCAAATGCTGCTCTCTCTAATTTAAATTATCTAAAGTGTTTAGATTAATAGGGGAAGGGGGTGTTCTTGTAAGGCACACATGTTACACACACATACACACATCCCATGGCTTAATTATTCCACACACACACTCACATACACACATATCCCATGGCTTAATTATTCCTTGCAGAGTAGTGCTTCCTGTCTTCTTCCCCACCCCACGAACCCTTCTCCTTCTACCTTCCCCAGCAACCTTGGCTCCCTTCCCCAGCAACTGTTCTATTGCAAAGGAATGTACAACTAACAGAGTCAGTTTTTCTTCTCTCTGCCCCCAAAAACTCCCCAACACC EMBV3_33870 TCCCCCAACTTCTTAGAGGGACAAGTGGCACGGACCAGAGCGAAAGCATTTGCCAAGAAT Gene GeneID:100337210|LOC100337210:XM_002698251:897_cdna Constitutive 0 NULL GeneID:100337210 25 GENE LOC100337210 NULL hypothetical protein LOC100337210 EMBV3_33938 AACGTGAGCCAGGATCAGGATTTAGTTTTGCAAATGCCTGTTATTATTGCTGGAAATGAT Variant GeneID:505968|ACADM:NM_001075235:20_cdna 140^408 2 EMBV3_00529 GeneID:505968 3 GENE ACADM MGC128274 acyl-coenzyme A dehydrogenase, C-4 to C-12 straight chain EMBV3_04689 GAGGACTACTTGATTGAAATAAGAACAGTTAGTGATGGTGGGGATGGAAGCAGCAGTGAG Gene GeneID:533402|CNTN6:XM_002696969:131_cdna Constitutive 0 NULL GeneID:533402 22 GENE CNTN6 NULL contactin 6 EMBV3_41344 GAAACTCCTCTGGACCCCAAGCTTAGAAAGGCATATGGCTACACATTCACCCCAGAAATC Variant GeneID:539761|PLAGL1:NM_001103289:8_cdna 349^419 1 EMBV3_39865 GeneID:539761 9 GENE PLAGL1 MGC160033 ZAC1 pleiomorphic adenoma gene-like 1 EMBV3_22743 CCAGTGGGAGAAAGGAGCTTGTGCAAAACACCAGGACCTAAACCGCTAAGCAGAACATGT Gene GeneID:404179|LYVE1:NM_205815:54_cdna Constitutive 0 NULL GeneID:404179 15 GENE LYVE1 CRSBP-1 LYVE-1 XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 EMBV3_29552 GGGGGGCCAAAGACTGAATAACATCCTTCCACAAAACTAGGAGGATCCCAATACCTGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16503 CTGTTGAGTCATGGCAAAAAACCCTTCAGTAAGCATGTGAGGAAGCTGCGTGCCAGCATC Gene GeneID:781724|LOC781724:XM_002697671:151_cdna Constitutive 0 NULL GeneID:781724 24 GENE LOC781724 NULL similar to ribosomal protein L6-like EMBV3_28113 GTGATTTTTTTTTCCTTGTTTGTTTATATGAAAACACTCAGAATGATGCAACCAAAAGGG Gene GeneID:521962|MLLT3:XM_002689544:13_cdna Constitutive 2 NULL GeneID:521962 8 GENE MLLT3 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 EMBV3_06943 GATCTTATAGATTAGGAGTACATACAAAAGGCTGTTGAAGAGGCATTTGTACCAGTTATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20171 AGCCTGTGGGAGGTCACTTTTGTTGATTTCCAGATCCAAGGCTTTCCCATCAAGGGGGGA Gene GeneID:510390|LOC510390:XM_002689372:20_cdna Constitutive 2 NULL GeneID:510390 7 GENE LOC510390 NULL similar to Vacuolar ATP synthase subunit S1 precursor (V-ATPase subunit S1) (V-ATPase S1 accessory protein) (V-ATPase Ac45 subunit) (C7-1 protein) EMBV3_21913 CCCAGAGCTCTTTGAGCAGCTGCAGATGTTATTGGAGCCAAACAGCATCACTGGCAATGA Gene GeneID:615134|UNC5CL:XM_002697231:398_cdna Constitutive 0 NULL GeneID:615134 23 GENE UNC5CL NULL unc-5 homolog C (C. elegans)-like EMBV3_32321 GCTGCCGAGTCACTGCCAAGACGGTTCGAGACCAAAGTTCTACTCCTGTCTTAATGCTGT Gene GeneID:511233|ORAI2:XM_002698196:737_cdna Constitutive 0 NULL GeneID:511233 25 GENE ORAI2 NULL ORAI calcium release-activated calcium modulator 2 EMBV3_04958 TCTGAAGATGAAGTTCAGCCATTTTGTATCAAACAGCACAACCAGTGTCTGTCACTTTCC Gene GeneID:539339|RAB1A:NM_001033628:59_cdna Constitutive 0 NULL GeneID:539339 11 GENE RAB1A MGC128556 RAB1A, member RAS oncogene family EMBV3_01442 TCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCG Gene BVV0102_027926 + 0 NULL GK000026.2:38170072-38617112 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206254 TCONS_00218368 TCONS_00152803 TCONS_00011730 TCONS_00018628 TCONS_00057018 TCONS_00147884 TCONS_00034471 TCONS_00122090 TCONS_00138406 TCONS_00087333 TCONS_00206255 11 XLOC_124865 XLOC_131688 XLOC_092568 XLOC_007281 XLOC_009312 XLOC_034820 XLOC_089771 XLOC_020687 XLOC_073646 XLOC_084614 XLOC_052448 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_36946 AATCCAAAGGACTCAACAGCCGCTTAAAGCCAAGCACTCTTCACTGCTAGCTATCGCCAC Gene GeneID:768230|CYYR1:NM_001078105:25_cdna Constitutive 0 NULL GeneID:768230 1 GENE CYYR1 MGC137604 cysteine/tyrosine-rich 1 EMBV3_05437 GTCTTCAGGGGATAAGAAACAATCCACAGATTGGTTTCCATACAGGGAAGTTCTCTGTCC Gene BVV0102_023481 + 0 NULL GK000030.2:132444518-132472093 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245776 TCONS_00245769 TCONS_00245773 TCONS_00245777 TCONS_00245770 TCONS_00245778 TCONS_00245774 1 XLOC_150822 Coding TCONS_00245777 XLOC_150822 Coding Coding SCML2 X:132410445-132446206 j TSS184426 3112 1 TCONS_00245777_2 441 0.0305269922879177 9 0.91322706935123 1.09335659848645e-12 0.000511086150068518 0.000320345643527242 2.56428420203158e-21 7.53694405282044e-07 7.14433394512383e-05 3.26234980858665e-23 7.45374144008505e-05 8.86688812948526e-08 1.56133825490314e-16 2.30074105160035e-10 9.63895320903665e-05 3.29392798588855e-06 0.000179376334853844 8.07474612749122e-09 1.56022087554071e-35 0 0 3.05131555690491e-16 0.000314477186147712 8.28849536134851e-05 1.49323161200529e-13 9.94180995703944e-05 0.000113993738768219 0.000658610767307356 0.00035635214281919 4.78437491552039e-10 8.07086859886086e-05 1.28130817264191e-21 1.68538547174924e-66 XM_005228395.1 SCML2 PREDICTED: Bos taurus sex comb on midleg-like 2 (Drosophila) (SCML2), transcript variant X1, mRNA. 0.0 4004 100.00 0.713046272493573 NM_006089.2 SCML2 Homo sapiens sex comb on midleg-like 2 (Drosophila) (SCML2), 0.0 1481 81.43 0.499035989717224 TCONS_00245777_2 sp|Q9UQR0|SCML2_HUMAN SCML2_HUMAN Sex comb on midleg-like protein 2; 0.0 595 68.48 0.997732426303855 2 coding 0 0 0 0 0.333155588167544 0.159450224132123 0.0249456370661693 0.741722857145471 GCTGTTCCACCCTCTTGACTTGGTGACTGATAGAGTTCTTATTACGAAGAATACCACAAAAACACAGCCGCCTCCTTCCAAGGCAGCTCAGCGCTCAATGCAGTCTCCACAGAACAGTGCTATAATATTACCAACACATCAGACTAAGAAATCAGGTCGGCCTAAACCACCTGGATGTCCTTCAGACCCCAAGAAGGGAAGTTCTGTTAAGAATACCACAACAAAGAAAAAAGGCCCACACTCAGGAAGAAAGGGAAAACGTATTCCTGTCATTTGCTCCACATCTTCAACTTCTGAAAATGCACTGGCCAGAGAACATGGTAACATTTCATATGATAAGGATGTTTTCCCTGGGTCATCTAAAATAGTGATGTCTACAGTCTGTGTCTATATAAACAAACATGGAAACTGTGGCCCTCACCTGGATCAGAACAAAATCCAGCAGCTGCCAGACCACTTTGGCCCAGGCCCTGTCAATGTGGTGCTCCGGCAGACGGTGCAGGCCTGTGTGGATTGTGCCATTCAAAGTAAGACTGTTTTTGAATTCCTTAAGCCAGATGATCGTGGAGGAGAAGTGATAACCGCTGCTTTTGATGGGGAAATTCATTCCATCCAGCTGCCTCCAGTGAACAGTGCATCATTTGTTCTTCGCTTTCTTGAGAACTTGTGCCACAGCCTGCAGTGTGATAACCTTTTGAGTAGCCAGCCTTTTAGCTCTTATAGAGGTAATACTCATAGTCCTGAAGAGAATGATCAAAATAAACCAGTAGAAGAAGATATAATGGAAAAGAAAATCACCAAACGACCTTCTGAACAACCTTTGCCTTATGTTGCTCCTCTCTCTCCTAAGCAACCCAAAATAATAGTGCATCCCTCTGAAGAGGAAGTATTACCTTCTGAGGAAGATGGCATGGCCAAAAAGGAAAAGCTTTCTGAAGAGTCCAAGAAGTCACCACTTAGTTCAGCAAATTCTTTGAGTCCTGCCAGAAAAAATCCTATAAGCACTCATACTCCAGTCTCCATGAATGGTTCTCAAAGTATGCCATGCACCTCAAGCCTCAAAGTAGTGGAGACCAAATCACCTATCAAGAGTAGTCAGCTTGAAGTTGAATTGGAAGTGCAGAGGGAAAGTGAAGTTGAAGCTCCAAGTTATATAGCTGTACCTGACCCCAGTGTCCTGAAGCAAGGCTTCTCTAAGGACCCTGAAACCTGGTCTGTGGATGAAGTGATACAGTTTATGAAACATAAAGATCCTCAGAAGTCAGGCCCCCTTGCTGACCTCTTCAGGCAACATGAAATTGATGGGAAGGCTCTGCTACTACTCAAAAGTGATGTGATTATGAAGTATATGGGACTGAAATTGGGGCCAGCCTTAAAGTTATGTTATTATATTGAAAAACTTAAAGAAGGAAAATATAATTGAAAAAATATATAAGTTTAGATTAGACATAATTTTCAGTTGTTTTGATAACTTTTAATGTAAAAGTATTTTTATTCTCATAGCAATTTTTGTTTTGTAGACAGTTCCTCTAAAACTACATTTTATCCAGAATTGCAGAACTCTATTATAAGTCCGGTCTACTTCTTTAAAAGCCATTAACATGTTAGTATTAGCATATTCAAATTGGCAGTTCTTTATCTGTTTATTATTTTATTGTAGAGTTTACAAATACACTTCATGCAGGAAACAAAGAAACACCTTTGATTTTGGTTAATGTATATATGTAAAACCAAAACAGCTAAATCCCAAAGGGGAAAGTATCAGGGACTGACAGGCTCTCTAATGAAATTCACGCGAAGTTTTCCTTAGAAGAGAATTTAAAGATGCAACTATAGATATCATCTCTTTCTCAAATACTTGGTCTGTTACTGCAATGTTCTGTTCGTGTTCTATCAATTTCCCGAAAGGGAATAGCCATATAAATTATCTTCCTTTTGTTACTATTTCTCTATATGTTGTATTTGTTAATATTTAAAGAAAAAACAAGCTTATAAACTTTCTTAAAGTGTTTTTATCAGTTTTTGATGAATTTTGAACAATTATAGAGTAGTTGTTCTATGCAGGAGATATTATACTACAAGGGTGGTTTGATGGAGTCCAATTAAATTTTTTCAATGAAATACCTGTTATTTCTAAACTTTACATATTTTCTCCAAGCTTAGACATTTAACTTGGGATTCTTTCCCACATCTTTATATGAAGAAGACTATCCCTTCTCCAGTGGATGTTCCCAACCCAAGAATCGAACCGGGGTCTCCTGCATTGCAGGCGAAGTCTTTACCAACTTAGCTATCAGGAAAGCCCTTACATGAAGACACCTGTGCCCAAATTTTAAAATATATATATTTTATTGTCTATGTTTATTCCTCATATGAATTCAATACTGTATTTATATATTATTCTATACTTGTAGGTATTCAAACAAGTTAACCTGTTCTTTTTGAATTTAATATGGCACTTTGCATTGCCACAGAGGTAATGGTGAACTATTTATATAGTTGGATGTTTTTATTCTGAAAAAATATTTGCATCATTTGCTATCACTAGTACCTCTCATCTTAGTCTTCAGGGGATAAGAAACAATCCACAGATTGGTTTCCATACAGGGAAGTTCTCTGTCCTATGCAATGTTGTTAGTTAATTTGCTTAGTTCTGAGCCATTTATTCTGCTAAATTTTGGAAGATGCATTAATTCTGACTTATCGTTTTGGGTTTTATTTTTAAAGTTAGAACTTTTGAGGGGAAATGGTGCTATATGTTAATTGTTATTACTTTGTACAACTTTGGTGTAATGTTTATAAGCTATGAGAATCTGTGCTAAAAGTATTAGCCATTTGTTATAAATGCCAATAAAATGTACACCAGGGGCAAGAATGTACATTTTCTTTTTTAGAAAACCAAATGTACTTTATATGAGAATGCTACTATTTAAAGGGTGGTTTCATCTATGTTATTCACTTTGTGTTTTAAGACAAAAATTCTAATTTAAACTGTCTTCTCTCAAATTGTTTGTGTGAAGATGCTGTGCCCAGTTAAACAGTCCTCAGGTGTTTGTATAAATACTGTTTTACAGTCTTCAGATTTTAAAATATAATAAAGTTAAATAACCTC EMBV3_32663 GCCAAGGCATAAGAACTTTCACGCAGCAGTTCCGGACACCCTGAAGATTCCTGACCAGAT Gene BVT0102_122175 - 1 EMBV3_13381 GK000011.2:47295737-47302535 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15859 CAATAGGATGGACTTTGAAGACTTGGGGTTGGTAGTAGATTGGGATCACCACCTGCCTCC Gene GeneID:515743|RNF181:NM_001034510:89_cdna Constitutive 1 NULL GeneID:515743 11 GENE RNF181 MGC126933 ring finger protein 181 EMBV3_09357 CCCCACTCCAACCTGGGGGTTCACAAGCCTTGGGTGTTAGCTGGAGGCGTGAACAATAAA Gene GeneID:616992|NT5M:XM_002695828:206_cdna Constitutive 0 NULL GeneID:616992 19 GENE NT5M NULL 5',3'-nucleotidase, mitochondrial EMBV3_02986 TGATTGGCCTGGGCGTCTTTGGAGCCATATGTTTACAAGAAATACAAGTGTCATAAATGA Variant GeneID:508740|CLEC12A:NM_001105345:31_cdna 312^741 1 EMBV3_03908 GeneID:508740 5 GENE CLEC12A MGC179455 C-type lectin domain family 12, member A EMBV3_15778 GAGGGGGCAGATGCCGCCACTGAAGTGGGTTTTCTTATTTCATAGTGGAAGAAGCTGAAC Gene BVT0102_193600 - 1 EMBV3_27262 GK000009.2:78326516-79261116 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40524 TCATCCAGTGCCGGGTGCTACCGCCCAGCCACCGTGTGACCTGGGATGGAGCCCAAGTGT Gene GeneID:100336349|LOC100336349:XM_002688902:176_cdna Constitutive 0 NULL GeneID:100336349 7 GENE LOC100336349 NULL vav 1 guanine nucleotide exchange factor-like EMBV3_20697 ATGACCAACACAAAGGGAAAGAAGAGGGGCACCCACTACATGTTCTCTAGGCCTTTTAGA Gene GeneID:782639|LOC782639:XM_002700025:110_cdna Constitutive 0 NULL GeneID:782639 X GENE LOC782639 NULL similar to ribosomal protein L21 EMBV3_32864 GCTGGACTCTGGACAATGACATCCTGCTGATCAAACTCTCCACGCCTGCGGTCATCAATG Gene GeneID:282603|PRSS2:NM_174690:565_cdna Constitutive 1 NULL GeneID:282603 4 GENE PRSS2 TRYP8 protease, serine, 2 (trypsin 2) EMBV3_35920 AGCTATCACTGAACATTTAGGTTGCTTCCTTGCTTCAGTGGACACAGAGGTGCATGTGTC Gene BVT0102_334206 + 0 NULL GK000013.2:63551300-63632377 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36898 CCAGGAGAGAACGATCCTGATTTGAAACTTGCAGGCCACCCTCGCTTCTGTGAAGAGATT Gene GeneID:521976|DPY19L3:XM_002694919:802_cdna Constitutive 0 NULL GeneID:521976 18 GENE DPY19L3 NULL dpy-19-like 3 (C. elegans) EMBV3_04285 TCTTGGGCCTTCACTGGTAGTAGAAATTTGATGAGAGAAGGAAAGGGAGAGAACTGTGGG Gene GeneID:512877|CENPI:NM_001102494:11_cdna UTR3_Alt 2 NULL GeneID:512877 X GENE CENPI LRPR1 MGC157083 centromere protein I EMBV3_09221 GGAGAGGAGGAACCTGATCACGGTGTGCAGGTCAAGTAACCTGGTTTGGTTACGGAAGTC Variant GeneID:525116|RUNDC3B:NM_001076874:26_cdna 277^443 4 EMBV3_40143 GeneID:525116 4 GENE RUNDC3B MGC139450 RUN domain containing 3B EMBV3_09413 CATTACAGTCATCCTGGGCCCTTACCCCGCTGGCCTTGAAAAGCAGAAAGAATGTCTGGA Gene GeneID:525104|LOC525104:XM_002692299:1684_cdna Constitutive 0 NULL GeneID:525104 13 GENE LOC525104 NULL similar to long palate lung and nasal epithelium protein 5 EMBV3_04204 ACTGCCGTGTATGTGCGTGACACGAGAACTCACTAAAGAAGGACGTTCACTTCGCTCAGT Gene GeneID:539435|FBXO30:XM_002690299:20_cdna Constitutive 0 NULL GeneID:539435 9 GENE FBXO30 NULL F-box protein 30 EMBV3_37406 CTGGAGAAGATGGTGGCCAGGAAGAAGACGACCACCAGGATTGGAGTCGCCGTGAACGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30942 GCCAGGAAGCAACATCACTCCCTAAGAGGGAGACGACATTTGGAGGGAAAAACATCACAT Gene GeneID:534994|ARHGAP25:NM_001046392:50_cdna Constitutive 0 NULL GeneID:534994 11 GENE ARHGAP25 MGC129032 Rho GTPase activating protein 25 EMBV3_32227 ATCCACTTGATAACCTACCTGGGGTCTGCTTCTGGTCTTCCTCAGTTTGGATGATGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42940 AAATCAGTACAAAGCTGTTGGTTGAGTTGTCTAGGCCGGGGTGTGGACATGCCTGGGAGG Gene BVV0102_250738 + 0 NULL GK000013.2:77954894-77960938 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044075 TCONS_00044080 TCONS_00044079 TCONS_00044077 TCONS_00044076 1 XLOC_026112 Coding TCONS_00044075 XLOC_026112 Coding Coding CSE1L 13:77919316-77957633 = TSS32468 6432 1 TCONS_00044075_3 973 0.046952736318408 25 0.832785259421651 0.000675122007299975 0.000208613508337783 0.000283790302711762 1.03452687096873e-07 0.00051377657029179 0.00016588385876921 0.000104188852843653 9.0163255879968e-09 0.000271495232202764 5.65526569952495e-13 1.69885109945283e-12 9.16090818515406e-11 7.77075915369925e-11 1.16363987176434e-05 7.2605902170914e-07 0.000850059335425332 0.000122783725379972 6.70965600522388e-08 0.000369538564235277 0.000109392317341674 0.000113312762921801 8.96392103122828e-05 0.000237825874994889 5.56391603361019e-09 0.00120290654993919 0.000391409742723498 0.000132377940258362 5.11950547577137e-05 1.91540525786037e-09 5.40453801736029e-09 NM_001014933.3 CSE1L Bos taurus CSE1 chromosome segregation 1-like (yeast) (CSE1L), 0.0 6579 99.97 0.567475124378109 NM_001316.3 CSE1L Homo sapiens CSE1 chromosome segregation 1-like (yeast) (CSE1L), 0.0 4929 90.34 0.556281094527363 TCONS_00044075_3 sp|A5D785|XPO2_BOVIN XPO2_BOVIN Exportin-2; 0.0 2001 99.90 0.996916752312436 3 coding 0 0 0 0 -1.32754489467775 0.0181813983081513 0.0356649492507862 0.573909894108081 CCCTTACTCGGCCCCTTGTACGCATGCGCCCCGGCCGCAGCCTCCCTGCCGCGCCATTTTGCCGGGGTTTGAATGTGAGGTGTGGAGTGGCGGTAGGAGTGGAGAGTGCCGGCTACGGTCCGTGACTGGGCTTCCCTTCTCCGTTCCCGCGTCCCCACGAGGCTCAATGGCAATGGAGCTCAGTGATGCAAATTTGCAAACACTAACAGAATATTTAAAGAAGACTCTTGATCCTGATCCTGCCATCAGGCGTCCAGCTGAGAAGTTTCTTGAATCTGTAGAAGGAAATCAGAACTACCCATTGTTGCTGTTAACATTATTAGAAAAGTCCCAGGATAATGTTATTAAAGTGTGTGCCTCTGTAACATTCAAGAACTATATTAAAAGAAATTGGAGAATTGTTGAAGATGAACCAAATAAAATTTGTGAAGCCGACAGAGTAGCCATTAAAGCTAACATAGTGCACTTGATGCTTAGCAGCCCGGAGCAAATTCAGAAGCAGTTAAGTGATGCTATTAGCATTATTGGCAGAGAAGATTTCCCTCAGAAATGGCCTGACTTGTTGACGGAAATGGTGAATCGCTTTCAGAGTGGAGATTTCCATGTTATTAACGGAGTCCTTCGTACAGCACATTCTTTATTTAAAAGATATCGCCATGAATTTAAGTCAAACGAGTTATGGACTGAAATTAAACTTGTTCTGGATGCCTTTGCTTTGCCTTTGACGAATCTATTTAAGGCCACTATTGAACTCTGCAGCACCCATGCAAATGATGCCTCTGCTCTGAGGATTCTATTTTCTTCCCTGATCCTAATCTCAAAATTGTTCTACAGTTTAAACTTTCAGGATCTCCCTGAGTTTTTTGAAGATAATATGGAAACTTGGATGAACAATTTTCATACCCTCTTAACATTAGATAATAAGCTTCTACAAACTGATGATGAAGAGGAAGCAGGCTTACTGGAGCTCTTAAAATCCCAGATTTGTGATAATGCTGCACTTTATGCACAAAAATACGATGAAGAATTTCAACGGTACCTGCCTCGTTTTGTCACAGCCATCTGGAATTTACTAGTTACAACAGGTCAAGAGGTTAAATACGACTTGTTGGTAAGTAATGCAATTCAGTTTCTGGCTTCAGTTTGTGAGAGACCTCACTATAAGAATCTCTTTGAGGACCAGAACACGCTGACAAGTATCTGTGAAAAGGTTATTGTGCCTAACATGGAATTTAGAGCTGCTGATGAAGAAGCCTTTGAAGATAATTCTGAGGAGTACATAAGAAGAGATCTGGAAGGATCTGATATTGATACTAGACGCAGGGCTGCTTGTGATCTAGTTCGAGGATTATGCAAGTTTTTTGAGGGACCCGTGACAGGAATCTTCTCTGGTTATGTTAATTCCATGCTGCAGGAATATGCCAAAAATCCATCTGTCAACTGGAAACACAAAGATGCAGCCATTTACCTGGTGACATCTTTGGCATCGAAAGCCCAAACACAGAAGCATGGGATTACACAAGCAAATGAGCTTGTAAACCTCACTGAATTCTTCGTGAATCACATTCTCCCTGATTTAAAATCAGCCAATGTAAATGAGTTTCCTGTTCTTAAAGCTGATGGCATCAAATACATTATGATTTTTAGGAATCAAGTACCAAAAGAGCATCTTTTAGTCTCTATTCCCCTCTTAATCAATCATCTTCAGGCTGAAAGCATTGTTGTTCATACTTATGCAGCACATGCTCTTGAGAGACTGTTTACTATGAGAGGGCCTAACAGCGCCACTCTTTTTACAGCTGCAGAAATCGCACCGTTTGTTGAGATTCTGCTAACAAACCTTTTCAAAGCTCTCACACTTCCTGGCTCTTCAGAAAATGAATATATTATGAAAGCTATCATGAGAAGTTTTTCCCTCCTACAGGAAGCCATAATCCCCTACATCCCTACTCTCATCACTCAGCTCACACAGAAGCTATTAGCTGTTAGTAAGAACCCAAGCAAACCTCACTTTAATCACTATATGTTTGAGGCAATATGTTTATCCATAAGAATAACTTGCAAGTCTAACCCTGCTGCTGTTGTAAATTTTGAGGAGGCTTTGTTTCTGGTGTTTACTGAAATTTTACAAAATGATGTACAAGAATTTATTCCGTATGTCTTTCAAGTGATGTCTTTGCTTCTGGAAACACACAAAAATGACATCCCGTCATCCTACATGGCCTTATTTCCTCATCTCCTTCAGCCAGTGCTTTGGGAAAGAACAGGAAATATTCCTGCTCTAGTGAGGCTTCTCCAGGCATTCTTAGAACGAGGTTCAAATACAATAGCAAGTGCTGCAGCTGACAAAATTCCTGGGTTACTAGGTGTCTTCCAGAAGCTGATTGCATCCAAAGCCAATGACCACCAAGGTTTTTATCTTCTAAATAGTATAATAGAGCACATGCCCCCTGAGTCAGTTGACCAATACAGAAAGCAAATCTTCATTCTTCTATTCCAAAGACTTCAGAATTCCAAAACAACAAAGTTTATCAAGAGTTTCTTAGTCTTTATTAATTTGTACTGTATAAAATACGGGGCGCTGGCACTGCAGGAAATATTCGATGGTATACAACCAAAAATGTTTGGAATGGTTTTGGAAAAAATCATTATTCCTGAAATTCAGAAAGTATCTGGAAATGTAGAGAAAAAGATTTGTGCTGTTGGGATAACCAAATTACTAACAGAATGTCCCCCAATGATGGACACAGAGTACACCAAACTGTGGACTCCTTTATTACAGTCTCTGATTGGCCTATTCGAGTTACCCGAGGATGATACCATTCCTGACGAAGAACATTTTATTGATATAGAAGATACCCCAGGATACCAGACTGCCTTCTCACAGTTGGCATTTGCTGGGAAAAAGGAGCACGACCCTGTTGGTCAGATGGTGAACAACCCCAAAATCCACCTGGCTCAGTCACTGCACAAGCTGTCCACTGCCTGTCCAGGAAGGGTCCCCTCAATGGTGAGCACCAGCCTCAATGCAGAAGCGCTCCAGTATCTCCAGGGGTACCTTCAGGCGGCTAGTGTGACGCTGCTTTGAACTGCCTTTTTTGAATTGTCTTAGTCCAGAATGGTTTCTGAGGACATCATGTAGACATCTGAGCACAGCTGCATTAAAACAAAAGGTGTTCGTTTTGAACTTGTCTATTAAATGTTGTTTTAAGCTGAACCTTGAGCAGATTAGTTTGTGTGATCATAAATATAAGTGAGTGACTTTTTCAGTTTGCAGCTACAAAGACAAGTATTACTACTAGCTTAGTGTATGACATTGATTGGAGCATTTGCACTGTTTTGGCAATTCTAAAGTTTTGACGGACACTGACTGTGGAGACATTTTTTCTGTTACCAAGTCCTTTTGTTTCGAGGCTGCTGCCGTTCGTGTTTGTCCTGTCCTTTGTGGTTTTGTCCGTTTCCTTAAGCTTTTACTGGAAATGTGAATAAGCAAAGAAATCACTTGTGTAACTTGCCAAGAAATGCACATTTCATAGTTTTAAATCTGTAATGAGCAATAAAAAAGAAAAAGCCCTAAAATATGTATCTAAGAACATCTTAAGGACAGGTTTTTGGTGCTGCTATTTTTATAATGAAGAATTTCTTTAAGTTTTTCCTCTCCTGGACTCCATAAAATCCTAATTTCTAAACAATTCCAATTCAGATTACCTAGTCTTTTTTTAAGAAGGGAAAGGGAACCATCACTGCAGGTTTGCGGCTTGTGTGTTAGAACTTTCAGTGAGCCCAGGTCCTGGGTGAACTGTGGGAAATGGTTTCCTCTGAATTGGGAAGAAATGCTTGGCCTGGCTTCACAAGGCTGGTGGGGCTGCTTCAGCTGGTGCAGGCGTTTGCCCGTTACAGTGTCTTCTCTGCAGATCACAGGCTCCTTGGAACGTTTTGAACCATGGCATCCATCTTGGCAAAGGCTGCCAGCCCGGCTCCTCCTTGGCAGAGTCCAGGGTTCCGTGGCCTCTGTCTTTAGAGGATAAAGAATCAGACTATCGACGTGGGGAGGTGCAGTTTTTACAGAGGATGTGGGGATTGTCTGTTTAGTGCAGTGAGACCGAAATCTGTTCTGTACAGATATGTCTGTACAGATTATGTGGTGTTTTTTTTCCCACCTGACTTGAATGCTTTATTTTCTTCATGTTGGTTTTGTTGTGTTGCTTGAGAGATTTCCAGTTTACTGTAGTGTACTCATACCTACCAACCTAATAATTATTTTTGATTTGAATAGTAATGGAAGCATTAAATCATATTTACTATGTGGCTTAAGTCGTCACTGGCAGATGAATATTGAGATAGCACTGAGATGTTTTTGAACTATGAACATGATCTGATACGGGTGAAACGTCTGGAATGGCAAACAGTTGGTGCTGCTTTGGCACTCGGCGGAGCTCTGGTCCTGAGCTTGCTAAAGCTGCTGGGTAACAGCTGAGGGGGGCAGGCAGGCCACTGTTCTGGAGGACCCTGGGCTTAGCATCCTCATCAGTCTTCTGAGTTCGAGTTCTGAATTTTTTCCTTTTTCGGTTAAAACGAATGAGAAACCATTTCACTTTGTAACTGCACCTCTTAAAATAGTTTCTGAACAGGAAGGCTGGTTACTTGCATTCTTTTACTCTAGCATAATTCATGAATATTTTGTTAAATTTTGTTTTAATGTTTAAAATTGAGATTTCCTACTGCATCCAAGACAGTTTTTGTATCTATCTTATAAAGAGTTTAAAGATGGGAGGCTGGAGTTGCTATGGTGTGTTTTCAAGACTTCTCACTGACTGTTCCTCGGTGGGGCCAGCTCTCTGTGTGTATGACGAGCTGGGTTCATACTTTGGGATCAGGCCAACCTGGGTTTAAATCACATGTCTGCCACTGAGGCCTTGACCTCCACGGTTCTATTTCCTCTTCTGAAAAAGGAGAATACCACTACTTACCGTCAGGATGGTTTTAACAAAACACTGAAGTACTTAGGAGAACCTGTGGAGGACAAATCAGTACAAAGCTGTTGGTTGAGTTGTTTAGGCCGGGGTGTGGACATGCCTGGGAGGCGGTGTTTGCCTGCACAGCAGCCCCGTAGACGGGAAGACGGGGCGTCCTGGCCCAGGCAAGGCCCTCTCTCAGGACGGTTCTAGACACGGCGGCCATTGTCACTGCAGAGTCCTTCGTTAGAGTCTCCTGCTGGACCCATTGAGTCTCCCTGCTGTCCTGTATCTTTCTCTTTTATAAATGTTTTCCTTGTAGCAAATACAGGAAAATATTTTAACAATTAAAAATCATTCATATTCCTAACTTCAAGCATTTTTATTCTCTTTCTAAGCAAAGTTTAGATCATTCTGCAAATAAAATTTTATATGCTTTTTAGAAAAACCTTTTACCATTTAAAACATTTACTTGGCAAATAAAATTTTCAGTGGTTGTAGTTTGTATCATTTGGATATATCAGTCCCAAATTATACAATCATTGTTAGGTATGTAGAGGTTTTATTTTATAAATCTTGAAGTAGACAACCTTTTAGGTCAATCTTCATCTCTTTTTTTCCTGAAGGTGGAATTATTGGGCCAGTTATCCTGTGGGAAAGGTTGTGCCAATTTCTGTCACACGTCCCTACCCACACTGGGCATTACTTCATTATTTGTGGGGCACAACAAATCTGGCATTCAGTCAGAATATTAGCTGCATGTGGTAAAAGTCTAATAAATAGGGCGTCTAGCTCAGCTGGTTAAGAATCTGCCTGCAGTGTGGGAGACCTGGGTTGGGAAGATCTGCTGGAGGGCATGGCAGCCCACCCCAGGATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTAGCGGGCTACAGTCCGGGGTCGCAAAGAGTCGGACACAACTGAGCGACTAAGATGCAGCTGAGCGGTCCGTCTCTGCCCTCCCAGAGGCAACACCTTTCAACTCACACTGCCTGTAATTCTTGAATCTTTACAGTTTAATTATCAACCATAAGGCCTCATCCTTCCCTGCTGTGACAGATAAGAACTTAGCTCACACCACTACTTCCAGCCTACACTTTGTAGTTCTCCTCTCTCTCTCTAGTAGTCCTAACTCTCGTCCCCATCAGCTGTGGCCTTCATCTCTGTACTGTCCTCTGGATTGATGTCTCCCTACCCTCCACCTCTGACTTCGTTTTCACACCGTTAACAGCAGCTCGCATTTCATCCTGTGCAGTAGCCCTTTTCTGTGCTTCGTCTGTAGGGCTCTTTTAAAAGGTAGAAATGGATAATCAGTAAGTGAACTGTTATAATGGTATAAATGTGTTCAGAACTGGACTTGGCAGTGTGTAGAGATTGTTTTTTCCTCCCAAGGCCCAGTGTTTGTTTTCCCTCAAAAGAGGCCATTCTTAGAGTCAAGGTCAAATGGA EMBV3_14581 CTGCACGGAGAAATCTTATCTGTCTGCCAAGCCTGTGTCGCTTGTGTTATGACATGTGGC Gene GeneID:532809|NAT14:NM_001037245:181_cdna Constitutive 0 NULL GeneID:532809 18 GENE NAT14 KLP1 MGC128922 N-acetyltransferase 14 (GCN5-related, putative) EMBV3_02920 CAGAGAATGGCCTTCGGTGTCCTTCCTGCATCACTGCCTTTACGGAAACATGCACTGCGA Gene GeneID:616860|LOC616860:XM_002695156:743_cdna Constitutive 0 NULL GeneID:616860 18 GENE LOC616860 NULL hypothetical LOC616860 EMBV3_09030 CACCCAAGAACCTGGTCAGTATCATCTTCTGTGAGGCTGTGGCCATCTACGGCATCATCA Gene GeneID:100298394|LOC100298394:XM_002690100:2_cdna Constitutive 0 NULL GeneID:100298394 9 GENE LOC100298394 NULL similar to ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b EMBV3_37337 CAAATAGGTAATATGCTTCTGCGACTGCTTTGGGGGGATGGGAAGCAGTAATTTTGTCAG Gene GeneID:522423|SNAP23:NM_001075831:163_cdna Constitutive 0 NULL GeneID:522423 10 GENE SNAP23 NULL synaptosomal-associated protein, 23kDa EMBV3_15400 TCGCTGCAGTCTGTCATCAACTACGTCATGCCCACCATCGTGCTTCCCGTGATTAACAAG Gene GeneID:280734|BPI:NM_173895:695_cdna Constitutive 0 NULL GeneID:280734 13 GENE BPI NULL bactericidal/permeability-increasing protein EMBV3_32758 AGCCCGGCGCTTCCTGTGGAATTGTGCCCTAAGTATCATCAAGGAAGGGAGATCAGTAGT Gene GeneID:535379|ABCA1:NM_001024693:27_cdna Constitutive 0 NULL GeneID:535379 8 GENE ABCA1 ABC-1 ATP-binding cassette, sub-family A (ABC1), member 1 EMBV3_40844 AGTCCTCTTGATGGGGAGCCCACTTAGAGAGAATCTGGAAGACAGAATTGAACTGGGAGC Gene GeneID:613547|RAMP3:NM_001083505:52_cdna Constitutive 0 NULL GeneID:613547 4 GENE RAMP3 MGC140177 receptor (G protein-coupled) activity modifying protein 3 EMBV3_32282 CCCAGAGATATACGTTGGCTTTGAATGGGGAGAGATGTTGAGTCTGAGGGGACATAAGAG Gene BVT0102_298775 + 0 NULL GK000003.2:21705579-21755126 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169086 TCONS_00169089 TCONS_00169085 1 XLOC_103275 Coding TCONS_00169089 XLOC_103275 Coding Coding RNF115 3:21678042-21707968 j TSS126685 3551 1 TCONS_00169089_1 217 0.289777527457054 7 0.881570593149541 2.85908412456749e-08 0.000777396588665544 4.01926782118673e-07 0.000770988541869509 0.000773260628634234 3.08511187763797e-09 0.000707934168056346 0.00116449580450068 0.00104224737152927 0.000156737843165689 3.56313690902338e-05 4.21566753302717e-05 5.47362801339406e-05 0.0002206330423632 0.000256588357561524 0.00440143172190516 0.00537760297610041 0.00143714960808122 0.000678891618584688 2.70040192452927e-14 0.000156979685179221 0.00107468277898516 0.000568409848858583 0.00152997016874628 2.47130772674223e-11 0.000372425062376647 2.27994186085241e-16 0.000279213967550767 0.000174926757972007 1.45462519599492e-20 XM_005203994.1 RNF115 PREDICTED: Bos taurus ring finger protein 115 (RNF115), transcript 0.0 3342 100.00 0.521543227259927 NM_014455.3 RNF115 Homo sapiens ring finger protein 115 (RNF115), mRNA. 0.0 1384 82.21 0.372289495916643 TCONS_00169089_1 sp|Q9D0C1|RN115_MOUSE RN115_MOUSE E3 ubiquitin-protein ligase RNF115; 1e-140 400 87.05 0.995391705069124 6 noncoding 1 0 1 1 -0.0547231717899873 0.682711672711091 0.0113139550916799 0.857297256402882 AGTGATTGGGACATAGTACATGCTCATTCTGGGACCGTTTGGACCCCACGATGTTTTTCCAAGATTTTAGACCCTTTCTAAGTAGCAGTCTACTGGACCAAGATAACAGAGCCAATGAGAGGAGTCACCAAACTCACACTGACTTCTGGGGACCAAGTCGGCCTCCACGGCTGTCAGTGACTCAGAGATACAGATCTCGAGGAAGTACTCGTCCAGAGAGATCCCCGGCTTTTGAAAGAGTACTACAACAGATCATTGCAGGATTCATTCCTGGATCCCCATTTTCTTGGAGCGGGATGCTGCACTCCAACCCTGGGGACTATGCCTGGGGTCAGACAGGGCTTGATGCCATTGTAACCCAGCTTTTAGGACAACTGGAAAATACAGGGCCTCCCCCAGCTGACAAGGAAAAGATCACATCTCTTCCAACAGTGACAGTAACTCAGGAACAAGTTGATAAGGGCTTAGAGTGTCCAGTATGCAAAGAGGATTACACAGTTGAGGAGGAAGTCCGGCAGTTACCCTGCAACCACTACTTTCACAGCAGTTGTATTGTGCCGTGGTTAGAACTCCATGACGCATGTCCTGTATGTAGGAAGAGCTTAAATGGTGAGGACTCTACTCAGCAAACACAGAGATCCGGGGCTTCTGCAAGCAACAGATTTAGCAGTGACAGCCAGCTACATGACCGATGGACTTTCTGAAACTAAAGACCACGTCTGAGCCAGGGCTATGGTAGACCTCCTATCACAGCTATTAATTGTATCAATGCAAAAAAAATAGTAGGTGGATTTAGGAATCACTTAAGAAACCCCAACTTATAATATTAATTCACTGAGTGTTTTTCTTCTCTAAATTTAAAGTTAGTGTCTACAGATGGAATTATATCTAGAACCAAATGCCTCTTATTCCTGAATTCAGAGTGATAAAATTTTGTAAGTGTGAAACTTAATTATGTGGGTTTCCCTTGCCAGAATAGAATTGGTTAATTATGTGGGTTTCCCCTGCCAGAATAGAATTGGTTCCTTAAAGTCTACCTAGGGTCATGCTGTCTGTTATGTTACCTTGTGACAGTTGTTTTCACCTCTTTCTTCAACCTCCACCATCGTTAGTGTACTTTATAGTAAATACAGTGGAACCAGAGCCGTAAAGTCCTGCTGATAAAGTGCTTCTGTTTTAATTGTACAGAAACATCTACTCTTGGCCACGTTAGCCATGGAGTGAGGTCATATTAAATCAGGAATCTGAGACTAATGATTTTTTTTTTCTTAAATCTTTAGAGAGCAAATCAAAACAAAGTTACAGTGGGAAGGCCTCTGATTGTACTCTTTGGTTTTCTCATTTTTATTTTTAAAGACTACTTCGTAAGATGCAGCTTCTGCAGAAACCAACATGACAAATGACATATCTTAAGAGTCTTATGTTGGTAGGAATCTGATTCTGGTTCCTTTTTGGGAATAAGTTGGGCAGGATAAAGGCACAAAAGAGAGATGTTTGAAATCTCTGGTTCTAAGGTTTTTTAGTGAGTCTCAGCTCATTGTTTATCCTGGGGACCTTAAAGTAATTTCCTTCACAGAAATAGGATTATTTTATTACTGCTTTTACAGCTGATTCATGTTTTTTTTATAATTCATTGGTCTTCAGGAATTGAGACTTTATGTTGTTTCATTTTAATTTTTAAAGTTCATTTATCATCTCTGAAACCTTTTTGTTTGCTTCGTTCTGGCTATACTTGGAGTCATATTGATTTTTGTGATGATGCTGAAACAGCTTGGCCTAGGAGAGATAGGCCTTCTTTTTTCAGCCTGTGTCCCATGTACATGCAGATGCTCTTTGGTGCATTTAAGTGTTTGAATAAACGGAGAAGCTTAAGAATGTTGTTGGAACTTCAAAGTCTTAAAAATAAATGATGGGAACATGTAACCACAGTTGGTGCACCAAAAATGGGGACAAGAGGGGCACCATTGGTGTGGTCTAATCAGCCCTTAATGGTTGGAATGATCAAAACAAGAAGATGAGTCTTTGGTGAGTCTCTTTCTTGGCTAGGAGTCTGTCACACACTGGTTTTGGGCATGAGGGGTGGGGTTAGAGATATCTTTGTAATTTAGTAGAGGATAGAGGAATAGGGGAGGGAAGAGAGAAAGTGGGAGAATTTAATGCTGAATTAATAGCTTGCCTCTAAAAGTTGTGACCATAAGATATGATTCAGGTTTGCCCCAGAGAGAATGAGATGTTTTCTCATAAGCTTCTTATGTTATACCTCTGTAGAGAGAGTGTTTTTGGAGAATGTGAACTGTTTACTGTGGTTATTGAAATGTAACCCAGAGATATACGTTGGCTTTGAATGGGGAGAGATGTTGAGTCTGAGGGGACATAAGAGGTATATTGTGAACGGCCATTGAGATGGGCTCAACTGAAGTTGGAATATGTTATGGTTTTCAAGTAAAACAATATTGACAGTATCAGCTGTCTCAAAAAATGATGTTAGCCTGGAAGTTTTGTTATTATCTGGATATGCCAGGACAGAAATGGTAGGGACCTAACAGAAGCAGAAGACATTAAGAAGAGGTGGCAAGAATACACAGAACTGTACAAAAAAGATGTTCACGACCCAGATAATCACAAAGGTGTGATTACTCACATTCACCTAGAGCTGGACATCCTGGAATGTGAAGTCAGGTGGGCCTTAGAAAGCATCACTACGAAAAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTTCAAACCCTAAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGAAAAAGGTCGGTTTTCATTCCAATCCCAAAGAAAGGTAATGGCAAAGAATGCTCAAACTACCACACAATTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATACGTGAACCGTGAACTTCCAGGTGTTCAAGCTGGATTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCACTAGATCACTGAAAAAGCAAGAAAGTTCCAAAAAAACATCTATTTCTGTTTTATTGACTATGCCAAAGCCTTTGACTGTGTGGATCACAATAAACTGTGGAAAATTCTGAAAGAGATGGGAATACCAGACCACCTGAGCTGCCTCTTGAGAAATCTGTATGCGGGTCAAGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTCTATGCAGAGTGCATCATGAGAAACTCTGGGCTGGATGAAGCACAAGCTGGAATCAGGATCGTGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACTCTTACGGCAGAAAGTGAAGAGGAACTAAAAAACCTCTTGATGAAAGTGAAAGAGAAGAGTGAAAAAGTTGGCTTAAAGCTCAACAATCAGAAAACTAAGATCATGGCATTCAGTCCCATCACTTCATGGGGAATAGATGGG EMBV3_18148 CTTACCCTGCCCGGCGCTGGCGGAAAAAGCGGCAAGGGGAAGTCCAAGAGTAAAGGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39610 CCACGTATCTACCTGTGCCCTTTTCCCCAACTCTTCAAAAACAACAGCTACCACACCAAG Gene GeneID:527428|RABGAP1L:NM_001103263:154_cdna UTR3_Alt 2 NULL GeneID:527428 16 GENE RABGAP1L MGC157039 RAB GTPase activating protein 1-like EMBV3_23849 ACTTCATTTCTGGTAGTGCCTTGGCCTCGGGGTTTGGGCCCTTGAAGGCAGTTTTGTACT Gene GeneID:522371|TSPAN15:NM_001075829:329_cdna Constitutive 1 NULL GeneID:522371 28 GENE TSPAN15 MGC139416 tetraspanin 15 EMBV3_43178 CCCCCTGCATTGAGAGTGCAGAGTCTTAGCCACTAGACCACCGGAAAAGTCCAAGAAATA Gene BVT0102_120909 - 1 EMBV3_07177 GK000021.2:43044976-43132860 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13120 CACAGGGCAAGACTCCAAGGAATCCCAGAAGAAAGCATGAGCAATCTTCCTAGGCAGGTA Gene BVV0102_176870 - 1 EMBV3_28666 GK000021.2:19643042-19858316 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07403 ACACAAAATTATTATCCGAAGTAGTGACTGCTTTCCTGTTTCAGTGTAGAAGTGCCTGTG Gene GeneID:515585|B3GNT2:NM_001102497:86_cdna Constitutive 0 NULL GeneID:515585 11 GENE B3GNT2 MGC179257 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 EMBV3_33398 TCAGTGAGCCTCCCACCTACCTATGGTCTGCCTGTTCCTGTTGTTTCAAAACCATTTCAC Gene GeneID:540831|RBM47:XM_002688207:82_cdna UTR3_Alt 2 NULL GeneID:540831 6 GENE RBM47 NULL RNA binding motif protein 47 EMBV3_39126 TTAAAGCAGACTGTCCTTTCTAGTACGACGTCAGTAACTGTCCACCACGGGCTCTGTACG Gene BVV0102_047828 + 0 NULL GK000012.2:87694939-87918739 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13031 CTCTGGAGCCATCCCCATCTTTAACAACCTGAAGAATCAAGGTGCCATTTCTGAGCCTGT Gene GeneID:504812|LOC504812:XM_002699243:224_cdna Constitutive 0 NULL GeneID:504812 29 GENE LOC504812 NULL similar to pregnancy-associated glycoprotein-18 EMBV3_03447 TTGCCTGGGGTCCCACTGTCCACGCTCAAGATTCTTCTTACCCCAGAAAAACAAGATGGT Variant GeneID:615986|CCL25:NM_001046569:99_cdna 861^978 2 EMBV3_01731 GeneID:615986 7 GENE CCL25 MGC140392 chemokine (C-C motif) ligand 25 EMBV3_27672 GCTCGTGTGCCTGGCCACAGGCTTCTACCCTTCCACGGGCTCACAGACCAGGACCAGTGG Variant GeneID:509513|LOC509513:NM_001080904:604_cdna 688^871 1 EMBV3_13751 GeneID:509513 4 GENE LOC509513 NULL hypothetical LOC509513 EMBV3_43379 TGCAGTGGGACTCAGGGTGTGTGAGACAGAGTGAGATCATTGCGGAAACAGAACGGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03494 CCTACCGGGACGGGCTTCCGAAGCTGGCAGGTTATGTATGTCTTCTTACATACGGTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02535 ACTGCTACAGTTTGGAGCTTGGGACTTAACCCATTCAGTGTAAAAGTACAAATCAGGTAC Gene GeneID:515278|ELMOD2:NM_001075705:23_cdna Constitutive 2 NULL GeneID:515278 17 GENE ELMOD2 MGC139980 ELMO/CED-12 domain containing 2 EMBV3_40625 ATGAAGGATCTTAGTTCCCAACCGGGGATGGAATCGCATCAGCAGCGTAGGAAAGTGGAT Gene BVV0102_265767 + 1 EMBV3_18088 GK000015.2:79167405-79174521 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17723 CTCTCTACAAACACATGTAACCTACTCTATTCCGCATGAAAACGCCTCCTTGGACAAAGT Gene GeneID:618956|SERPINB4:NM_001102322:203_cdna Constitutive 0 NULL GeneID:618956 24 GENE SERPINB4 MGC159547 serpin peptidase inhibitor, clade B (ovalbumin), member 4 EMBV3_15789 TTTTAGCGGAGAGTTTGGTTGGGTGGGAGATTGGAGCGTGGTTAAAGTGGCAATCCACCC Gene BVT0101_047154 - 1 EMBV3_25299 GK000008.2:80900919-81510918 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37753 CCTACCACCAGAGTCACACACAAGACCCCTCCCTGGAACTCGTTCATCTAACGGAAACAA Gene BVT0102_083087 + 0 NULL GK000019.2:48543244-48550947 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097416 TCONS_00094235 2 XLOC_058245 XLOC_057388 Coding TCONS_00094235 XLOC_057388 Coding Coding DCAF7 19:48516497-48547687 = TSS70524 5980 1 TCONS_00094235_2 342 7 0.808490172817339 0.0080600342870958 0.00328431317951005 0.00602974157878751 0.00405868410956431 0.00660476614776994 0.00216695416236551 0.0044729805294373 0.00383030431513449 0.00629398012630257 0.00184933767739773 0.000713625181371469 0.000475946471458063 0.000830391790507204 0.00312004849906889 0.00253822682827628 0.00315129242424548 0.000347596760114921 0.000715905597229802 0.00595347926892701 0.00599467661970668 0.00194323424852109 0.000603460328152978 0.00178477521732351 0.000877818809520007 0.00851315847961526 0.00692616097304226 0.00391968168621521 0.000631040275432593 0.000437894882434609 0.000507646791923077 NM_001038125.2 DCAF7 Bos taurus DDB1 and CUL4 associated factor 7 (DCAF7), mRNA. 0.0 2771 100.00 0.256688963210702 NM_005828.4 DCAF7 Homo sapiens DDB1 and CUL4 associated factor 7 (DCAF7), transcript 0.0 2814 75.59 0.69314381270903 TCONS_00094235_2 sp|P61962|DCAF7_HUMAN DCAF7_HUMAN DDB1- and CUL4-associated factor 7; 0.0 718 100.00 0.997076023391813 1 coding 1 1 0 0 0.002231776424933 0.989074736173172 0.0410217712534608 0.412548546256763 AAACGGAAGGTGGTTGTTGTCCGAGCCAAAGCTGGTTTGAAACTGGGGGTCGGGCCCGGCAGTCGTTGTCTGTTGCCACCGCCCCGCTTCCGGGCTAGGCCGTCCCTGCCCGCCCCCGCCCCGCCTCCCTTCGGACCCCTGGGTCCCAGGCCAGGCTCCCTGCCCGTTTTGCGCCCGGCTCGCAACAGCCCGCTCCCGTCCTGGTCCTCACTGCGGCCCCTTCGCCTCCACCATGTCACTGCACGGCAAACGGAAGGAGATCTACAAGTATGAAGCGCCTTGGACCGTCTACGCCATGAACTGGAGCGTGCGGCCCGACAAGCGCTTTCGCCTGGCGCTGGGCAGCTTCGTGGAGGAGTACAACAACAAGGTTCAGCTTGTGGGTTTAGACGAAGAGAGTTCAGAGTTTATCTGCCGGAACACCTTCGACCACCCGTACCCCACCACCAAGCTCATGTGGATCCCTGACACGAAAGGCGTGTATCCAGACCTGCTGGCGACGAGCGGCGACTATCTCCGCGTGTGGAGGGTTGGCGAAACAGAGACCAGGTTGGAATGTTTGCTGAACAATAACAAGAACTCGGATTTCTGTGCTCCTCTGACTTCCTTTGACTGGAATGAGGTGGATCCTTATCTTTTAGGTACCTCTAGCATCGACACAACGTGTACCATCTGGGGGCTGGAGACTGGGCAGGTGTTGGGGCGAGTGAATCTCGTGTCTGGCCATGTGAAGACCCAGCTCATCGCCCATGACAAAGAGGTCTACGACATTGCATTTAGCCGGGCGGGGGGCGGCAGGGACATGTTCGCCTCTGTGGGTGCCGATGGCTCGGTGCGGATGTTTGACCTCCGTCACCTAGAACACAGCACCATCATTTATGAAGACCCACAGCATCACCCACTGCTGCGCCTCTGCTGGAACAAGCAGGACCCCAACTACCTGGCCACCATGGCCATGGATGGAATGGAGGTAGTGATTCTGGACGTCCGAGTTCCCTGCACACCTGTTGCCAGGTTAAACAACCACCGAGCATGCGTCAATGGCATTGCGTGGGCCCCACACTCATCCTGCCACATCTGTACTGCAGCGGATGACCATCAGGCCCTCATCTGGGACATCCAGCAGATGCCCCGGGCCATCGAGGACCCGATCCTGGCCTACACAGCTGAGGGGGAGATCAACAACGTGCAGTGGGCGTCGACCCAGCCTGACTGGATCGCCATCTGCTACAACAACTGCCTGGAGATACTCAGAGTGTAGAGTCAGTGGCGCTGTGCCCGCAGCGGGGCTCGTGTGGCTCCCGCCCCTGCCCCACCCCCGGAGTGAGAAGACGCGCGTTTCCGGTGGCCAGTACGTCTGTCGTTGCTTTGCACCCGCTGTTAGCAGAAACTGCTCCAAAGTCCCCGGCCAGCTGCCCACCGCTCGCTGTGCCGGACTCAGTGCCGGGCGGCGCCTCCTCAGCCCAGGGCTGAGTGTTTCGATTTCTCTCTCCTTTCCTCATCTCTTTTGGTTCTGCTATTAAACATTTCTGTATATCTGTTTGTCAGCCGTCATGTTAATGAGCTCTGTGGGCAGCGGCTACGTCTGTATTCGTCTGTCGCAGATGTCTCTGTCTGCCCAAGACAGCAGTCTGGGTCCTTGTCCATGTGAGCACTTCCTGGGAACAAACACCAGTTTGAAACTGTCTTTCTTCATGTTATCCATGTCTCTTAACAAATTTCAACTTTGTATATTTTTTAATCTATCAGGCTAATTTTTTAACGAAAAGAATTTTACTCCCTGGCCTCTTCCTTGGTTTTATCACCCTCCCTGTTGACACCTTCCTCTCTTGCCTCCCTGCCTGGATCTGGCCCCAGGCCCCTGACCCTCCGAGCAGTTTGCCTTCTTGAATCACTGCCTGGGCGGAATATACCTGACTGGGAGTCCCAAACCTCGGTGCTCTGAAGTCGGCCGGCTCACGCCTTTCCTTGGCCTGGCTCTTGTCGAGGGCATTCTGAGCTCCAGAATAGACGTGCGACCCCTGCTCTTACTCCCTCAAGTACATACGCCTGTCCAGCCCCCCAGGACATACTGAGCTAGCCAGGCTAATGGGGGTGCCTGACTCCCGGGGGATGGTGGCAGGAAGGCTGAGCTTAGAGTATGTTTCGGTCCACAGTTTAAGAGTCTGTTTTTCTCTCCAAATATTAACCCCCAACCATTCTCTTTCATGTCTTGAACAGTAGACAGGAATGATGTAGCAGCTGAACTTCAGTATCTCTGTCTGTTTAGTTCACTGTGACTGGTGGTACGTTGGCCACTCTCCCGCTAGAGAGGAGAGAAAGCCCTCCTTGGCAGGTGCCCAGTCTGAGTGTCCATCCCAAACAAGATCTCTAGAGTGTGGGAGATGGTCAGCTCTTGCAGAGGATGGATTCAGGCAGGGGTGATCCCAGGCCATCAATTAAACAGAGAGCAAGAGAACTTCAGAGACCCAGGGCCAGCCAGTTCAGAGCCCCATGAACCCATCAGCCGCTCTGCCCCGAGTTTTGGTTCTGAGCAGTATTGGACATGGAGGCGGCGGGTGTCTGTTTCCGTTAGATGAACGAGTTCCAGGGAGGGGTCTTGTGTGTGACTCTGGTGGTAGGCGAGTCCTTGGGCGGGCAGAGTTTGGGATGTGCCCAGAGTCTGGGGGAGTATGGTTTGCCGCGCTCTGCCAAGTGCCCGAAGGTTTCTGAGACCCTCTGAGTTGAGCAGCTGGGAGTGGAGAGTAGCAGGCCTTGGCGCCAAAGATCTTGTCCACTGGGGCTCTCGCCTGCCCTTGAGAAGCAAAGCAGCTAGCTTTGTGTTTCTGGGCCCTTAAAGTCTCTTGGTTGAGTCTCCCTTTTCAGAAGCAGATGGATTGGTATCCCCAAAGTCATAGCTCTTTGCTTTCATACATGGGGGCTTTTCCCAAAGAAAAAGCCTCTTTTTCCTTTTCAGTCAGGGTATTTCCACTTCCACCTTTATTCTTGCTTCTGATTTGGGGGCTCTCCAACTGGCTGTCTGCTTGGCCAGTCCTCCTGCGTTTACCGCCAGCTTTGCCCTGCATCATTTTTGGACATGTGACACGAACCAGTCCTTGGTCAGAACCCTCCTCTGCTTGTTATTGTGTTTGATGGTTCCAGGGTCCTTCCCTCAAGGGTAGCAAGGCTAAGTTGAATGTCGCTGGCTCTGGGAGGCCGTCAGTTCCTTCCTGTGGAAAGGGTCTTGAAATGGAGTCTAGTGGGAGAGGTCGTTCTGGGGACAGGGCTTAACTCCACTGAGTTCTGAGTTAAGACCCCTTCCCTGATCTGCACTTTTGTGGTCTGAGTGGTGAGGAGATTTGTCACCTGGAACTTGAAAGCATCCTGGAGAGAAAAGTTCATTACTAGGAATGAGGATATTTTGGACAAAGTTGCTATTTACCGTGGAAACCAACAACTTTTGATTTTTTTTTTCTTTCTTTTTTTCCTTTGCCCTGTGGACTCCCAGCCCTATCACCCTCCTTAGGCCCTGAGGTGTGGTCCTCTTCCTCCCAACATCCCACCTGGGCCCAGGTGAGACTCCGCAGCTCACCTGGGGGGAGAGAGACGCACACACGCATGCACGCGTGCACACGCAGTAGCTGGGATGCTAGAATGTTGAAGGCTCCCTCTCCTTCCCTTCATGCCCTGAACCAGATGGCCTCAGGGCTGAGGAGGGGATTTCTGTAGTCTCAGGATTTAGAAAGCCTCTTAGTCAGCCACGCTCCAGGAAGCAGAGGTCTGCTGTAGTTTCAAAAGCAAGTGTTGGTTTAATTTGTTTAGGTTCTCAGATTGCCAGCTGGAGAGAAGAGGTGGGAGGCGCTGCTTCTGTCCTCCTTGAACGTGAGAAGAGCCCTGGGAAGGCTGTGCTGGCACCTCTTGGCTCTGGCTCTCCCGGCTGTCGCGCTTTGACGTGGTCTTGGACCCCTGAGCCACAGCCACCTTTGTTTTTCTTGTCCTTCCTGAGGGGAGGCAGCTGCTGAATATGTCAGGCTTCAGGCTCCCCATCAGAGAGTTGGCAAAAGTCCTTTGAAAGCGTGAGTGTTTACACCCAGGAGAATCAGAAGCCTTTCTTTCCAGGAAGGAACTAGGCGCACGATGAGGACTTGAAGAGAGAAGATGTTTGATGATCAGGGGAGAATCTCTTATCAGAACCAGGATTGGCTCTCAGAGTACTGGTTAAGATTTGAGAAGAAACAGAAAAAAAACTGAGACTCCAACAAGTTTTTGATGACAGGTGTGGCTGAAATTTTAGGAGGAGATTGAGGATGGGAGAGGAAATCAGTGATGATGAAGAAGGTATTCGAGGGTGGTACAGGTCTGAGGTGAGGAAGTAGGCAGACTGTCAGACTGTCATGTGGCTGTGGGGTGAGACTGTTCTCGGGCTGTGTCAACCTTCCAGGACCATTCAGCGATGTCTGTGATGCTGGGGACAGGGTGACAGAGGGACCCCTTCCTGCTGCATTTCAACCCTGTTGCTGTTTGGTGGCAGAAATCTGCAGGAGTTGAGAGCCCCTCAGTCCTTCCAAACCATGGCTCTTCTTGGTCGTAAGTTTGTAGACGGCAGAAGCGGAGGTTGCAAGGTCATAGCGACTCCCCACCCCGCTGTCCTCTTTCTCTTTCTCTTACCTCCCCACCCTTTGCCCCTGTAGATCTCTCTTCCTGCTGTAGCCTGGGCCTTGAATTCCCAGCCTGCGACATATGTAGGAGCTTCACAATCTGCCAGCTATGGGAGGCCCGCCTCGTATCTTCCCTCCACCGTCCCCAGGTCCTTTGACTGCCCGGCTTAGGGGAAGGGAGACCATTAAAGCAGAAGCCCCAGAGCAGACTCTGCCCTTTCCTGTCTGTGCTCCGGGATAAGCAAGGAAGGTCATGCTAGTCACTTCAGTTGGGTTTTCCCTGGGAGGAGAGCTGAGCCGAGCAGTCAACTGTGACCCCTGGGCCAGGCTCTCCAAGAAGGGTCGTCCCTGCACTGGCTGGGCCAGCTACTCAGTGTTGCAGAGCCTCGCCCTCTTTTCCCACCATGTCATTGCTGCTAATGGTCAAGGTCAAATATATGGCCACATGGAATGGGCCAGGTCCTCTCAGGCTCCTTTGTGGATGTGATTTTTTTTTTAAGAATGCAAACATGCAGGTGCCTTCCCGAGAGGCTTGGACTGGTGTCTCCAACCAGAAACAGATAAGCTAATCAGAGTATGAACTCAAGAGGAGGGATGTCAGCAGACTGTGTAACAGCTGGAAAACGTCCACGTACCGGCCTTTAGGACAACCCAGGGGATCAGAACTCGGGATCCCTGCTCTTTAAAAGAACGTTCTCCCCTTGGGTTGATAATGCGGTGTGTTATGAAACTTGTGGAGCTAAAGCTTGGACTTGCTGGAGTCGAAGATGGATCATTTGATGTGGTTCCTGTGTATGTGATGACCCCTGTCAGTGACCTTCCAGCCTTCCTCCCCGAGCGTGAATTTGTAGCATGATTGTACAAATCTCTCTGTAGAAAATGGAGGTTTCTTGTTCTCTGAAGTGTTAAGCTCTAGCCAATCAGTTTCTGTCCCCTTTAGCCTAGTGTGTCCGAACTTAATTTCTCGCTATGTATTTAAACTTTTTCTCTGTATCATAGGTTTTGTGGCATCCCACGGTCAGGTGGAGAGGAAGCTGCCCTTTCAGAACTGTACTGTAACCATTTTTTAGAGAAACATTATTTTCACAGGACTGATTATACACAGGGCTTGTAAAAAAATTTTTAACACTGTGCTGTGAAGCCACGCTGGTAAATCTCCATTGAAGGCTACTTCAAAGGCACCTGAAAGTGGAGTGTTATATCTATGACTTTATTTCTTGCTTCCTAAGTATATTAAACCTAATTTTCACCCTTTCATTCTGTTTCAGCCTCCTGTATAAGAAGTACCGTATTTTCTGCCCATCATACTTTGTAATAAAACTTGAACATGTATAGACTGACTG EMBV3_02200 TACAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTTCGTCTGAGGGGTGGCTGTTAA Gene GeneID:281370|LOC281370:NM_174133:415_cdna Constitutive 1 NULL GeneID:281370 19 GENE LOC281370 NULL polyubiquitin EMBV3_30003 GGACTATGCTTTTACCCCAAACTCTGTCTTCAAGTCCCTTCAGCCTCTTGGCTCAGAACC Gene BVV0102_386793 + 1 EMBV3_19828 GK000018.2:58821827-58865345 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087260 TCONS_00218365 TCONS_00087259 TCONS_00140862 TCONS_00091417 4 XLOC_052423 XLOC_131688 XLOC_085291 XLOC_056192 Coding TCONS_00087260 XLOC_052423 NonCoding Coding - 18:58835168-58841472 - TSS64819 2859 5 TCONS_00087260_6 83 0.966072053165443 2 0.546723782325877 3.97393840993752e-05 7.02929804861141e-05 0.000209755789372649 7.15762371115843e-05 0.000192996514341018 9.61949112823321e-05 0.000244905075483057 0.00021600837294806 0.000303209388020571 3.72153947936596e-05 0.000162897840981958 0.000125657069891721 3.11448183026399e-05 5.21773240321052e-05 1.2393221063309e-07 9.39028736577736e-05 1.57297304078122e-05 0.000288217087163666 0.000113555009805358 0.000219472754863599 5.59220792876295e-05 4.36310387931468e-05 0.000333112813520478 1.11929287362257e-05 0.000299272725349182 0.000342934354286639 0.000114315894390601 8.79092499845665e-05 2.74029758338975e-05 0.000200212055379116 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 854 88.92 0.229101084295208 0 noncoding 1 1 0 1 1.55657144251834 0.000204121725010461 0.0420730815901053 0.598332402750368 CCATTGGAGGACGGCGAACGGTGGCCAGTTGGAAGGTCTCTTAAGTATAATACTGTTTTACAATTAGACTGGTTCTGTAAGGAACTAGGAAAAAGTGATCTTAAAAGATAGCTTTCTCACTCAGTTGGCTCCAGATATCCGCCGTAAGCTATTAAAATGGGCGTATAGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATCAGGGAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCACCATGGCTATGAAAATCGTTCTTAAACAGCCTGAAAAAAATGCCCAGGTAAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATGTAAGCCGCCTCAGGCATCTAAGCCACCCCGGCTCCATGTCCGGTCTACAAAGGACCACACTGGAAGAGAGACTGCCCTCAGAAGCCTAGGTCTCCGGGGCCGGACTCTCAAGACAATCCAGACTGAAGATGGGCCTGATAACCTAGGTGAGCCTACTTCTGCTGACTCCAGAAATCCTGAGTGTACCGTTTGATCCTCAAGACAATGCCTTCTTCTGGGCTCACTCCTACCCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGTAGAACACTCCCCTCTTCATCAGTGGGAGGTTTCCCATGGTGGACATCTCCACTTAAAACAAAAGACTTTCTCCAAGTCTCTAAATACCTTCAACAATAATCACATGCGATACCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGAACTAGTGCAACACATTTCACTTTAACTATATACATAATGTGAATTTAAATTTTGGTTTTAACTTGTTTTAATGACTATGTTGCCTTACATCTGTAACTGTGTAACTAGATTTGTTTCTAGCCACATAAAAGCTTTTAAGTTACAAATGGTTGCTCAAACTCCTGCTACTGCTACAGCTTCCTCCAACTACTACTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAGTTTAGGGACAATGCCCCTTGTCAGCTCCGAAGCAGTTATGGAACAAAAAAGATGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGCAATAAGAGGGTAACAGGCAGGTAGGCCAGGGGTCTCCAAACGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGTGATATTTTTTCCTTCTCTAAACAAATTTAAAAGGAGGTTTCTCTTAAAATACTGTGTTGCCATAATGACACCTGGTTTCACCTGAAGTTAACTATTCTCAAACCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTTTTAAGTTATGTTAATGGACTATGCTTTTACCCCAAACTCTGTCTTCAAGTCCCTTCAGCCTCTTGGCTCAGAACCTACTTGACATACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAACAAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTGATGGCCCAGGATAAACCATTTGCTGCCAAGATTATCCCGAAATACATCTTATGAGTGAGGGGCCTGGTGCCATTCTGAATTTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGATATATAACATCCAGCTGAAGACTAAGAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTCCTCTGGGGGCTAAGAATCCCAGTGTCTTTGCCTGATTCAACAACAATCTTTCAAGTTGACTCACTGGAAAAGACTCTGATGATGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACCAACTCGATGGACATGAGTTTGAGTGAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAATTCATGGGGTCGCAAAGAGTAGGACTCGACTGAGCGACTGAACTGAACTGAAGATAATATAACAACAATGAATCCTGCTTGAGGACATGTTTCTCCTTCTTGAGAACCTTCTGATTAATCCTGTCATCTTGAAATGTAAATTCTGGGCATGGGTCTCTTAAGACCTTTACAACCTTGAGACATTCTTTTGACTTACTGTAATAACTAATTGAGAAAGTATATAGCTCCCTTGCTAAGACTAGCGAGGGGTGTGGGGGGCATTCTCCATCCCCCTTCTGATGTTTATGTCAGAAGCTTTCTCTGTCCCATTTCATACTTTAATAAAACTCTGCTACACCAAAGCTCTTGAGTGATCAAGCCTGGTCTGTGGTCCCAAAGCTATATCTACTTCTTCGGAGATCATGAATCTGACATTGTTCACTGTAAGCTATCATCTCTATGTACATTACAAGAGGTTTCCAACCACTATTAATGTTGTGCTTTCCTCTCTGCCCTGAGATCTCATCTCTGTTTACACTTTTGATACATTCCCGTCCATTTGGGGGATATGTTTTGTTTCCAAAACAAGTATCTCAAACTAAAATATATGATGTATGAAAAGAGCACACCTAACATTGTTTTCAATGGTGAAAGACTGAAAACTTTCCCTCTGAGATCAGGAAGAAGGCAAGGACGCGCACTCTGCATCACTGTTCAACAAAGGACTAAAAACCCCTAACCAGAGCAATTAGACAAGAAAAAGAAATCAAAGCTTC TCONS_00084491 r 5' 8354 TCONS_00084491 r 5' 4380 EMBV3_42151 AAGCCTGAGAGGGTGGCCAGAGCCCCTCCGAATACCGTCAGCCAAGGAAGAACTGTCTCT Gene GeneID:615910|PLEKHG5:XM_002694167:594_cdna Constitutive 0 NULL GeneID:615910 16 GENE PLEKHG5 NULL pleckstrin homology domain containing, family G (with RhoGef domain) member 5 EMBV3_37597 TAAGAATTTCAAGACAGGGACAGCAGAGCATTAACCCAGGCTGTGGGGACAGAAGTCAGC Gene GeneID:523285|ARRDC2:NM_001081592:77_cdna Constitutive 0 NULL GeneID:523285 7 GENE ARRDC2 MGC155074 arrestin domain containing 2 EMBV3_16009 ATTGTTTCCGGATGACTGACCAGGAAGCTATTCAAGATCTCTGGCAGTGGAGGAAGTCTC Gene GeneID:100295149|LOC100295149:XM_002690072:5_cdna Constitutive 0 NULL GeneID:100295149 9 GENE LOC100295149 NULL similar to nucleophosmin 1 EMBV3_19548 GGCTCAGGCCTAAACTACTTTTACGATACCAAATGAGTAAAAAACCTGACAAATCAGGAC Gene GeneID:529146|MAP3K7:NM_001081595:41_cdna UTR3_Alt 2 NULL GeneID:529146 9 GENE MAP3K7 MGC154981 mitogen-activated protein kinase kinase kinase 7 EMBV3_40691 CCCCTGCATTACACGACCATCATGAGTGACAGAGTGTGCAACTTACTGGTCTTTGCGTCA Gene GeneID:788210|LOC788210:XM_002687613:729_cdna Constitutive 0 NULL GeneID:788210 5 GENE LOC788210 NULL similar to Olfactory receptor 6C74 EMBV3_10979 ATGCCGGGAAGGCATATCTCCAGAGACAAGATCATCACAGCTCCATGGGCTGGATCGCCT Variant GeneID:782023|CD1A:NM_001075382:15_cdna 629^907 1 EMBV3_08663 GeneID:782023 3 GENE CD1A NULL CD1a molecule EMBV3_01812 CCTTCCTGCCAAGATCTGCCATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGGTTGCC Gene BVV0102_235576 - 1 EMBV3_03525 GK000001.2:117546174-117548525 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004971 TCONS_00004970 TCONS_00004974 TCONS_00001904 TCONS_00004972 TCONS_00004969 TCONS_00004973 TCONS_00004968 2 XLOC_001153 XLOC_000465 Coding TCONS_00004968 XLOC_001153 Coding Coding MED12L 1:117545514-117692609 j TSS2463 6070 1 TCONS_00004968_5 1311 31 0.958944620446789 2.25099734672196e-142 7.72327102083205e-45 5.09281225658998e-89 7.92486015954518e-05 5.44817043785852e-177 1.33629284022654e-97 3.74679921639224e-45 1.99984353064617e-29 2.15020866588007e-44 1.21784668498103e-30 0.000132763454294731 1.23689723586807e-103 8.05744148725652e-94 1.10720500751517e-29 6.43477442436487e-18 0.00020575083788226 0.00337806230519053 5.45314896352549e-05 4.24503565190269e-21 8.77695500261438e-127 2.53296028293732e-19 0.000118062504157445 1.98034604683544e-05 0.000187049039329714 3.24805342711916e-23 7.56791305102477e-73 2.94176428512114e-12 0.000234484792048322 0.000129769258033507 0.000108597433219527 XM_005201808.1 MED12L PREDICTED: Bos taurus mediator complex subunit 12-like (MED12L), 0.0 7909 100.00 0.722240527182867 XM_005247096.1 MED12L PREDICTED: Homo sapiens mediator complex subunit 12-like (MED12L), 0.0 7048 89.48 0.870840197693575 TCONS_00004968_5 sp|Q86YW9|MD12L_HUMAN MD12L_HUMAN Mediator of RNA polymerase II transcription subunit 12-like protein; 0.0 2424 96.03 0.999237223493516 1 coding 0 0 0 0 -0.130439738192611 0.299151279210099 0.0325676073898349 0.672157331692528 GCTGCCAGGGTCCGAGACGGGCGTCGGAGAGGATTTTAAATGGAAGCATGAGCGTCATTATCAAGTCAGCCACCAAAGTGTTTTTGAGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTTTATGGAGTGGGAAAAGAGCGTGACGAAGCCAGACATCAGCTGAAGAAGATTACCAAAGATATTTTGAAAATCCTAAATAAGAAGAGCAACACAGAGACAGGGGTTGGAGATGAAGGACAGAAAGCCAGGAAGAGCAAACAGGAAGCATTTCCGACCCTGGAGACTGTGTTCACAAAACTTCAACTCCTTTCATATTTTGATCAGCATCAAGTGACATCTCAGATTTCTAACAATGTGCTAGAACAAATCACAAGCTTTGCATCAGGAACATCATACCATCTCCCATTGGCTCACCACATTCAGCTCATCTTTGATCTCATGGAGCCAGCACTTAATATTAATGGACTCATTGACTTCGCAATACAGCTCCTGAACGAACTGAGTGTTGTGGAGGCAGAACTGCTCCTGAAGTCCTCCAGCCTGGCAGGAAGCTACACGACAGGACTGTGTGTCTGCATCGTGGCTGTTCTCAGGCGTTACCACAGTTGTCTGATCCTGAATCCTGATCAGACAGCCCAGGTGTTTGAAGGATTGTGTGGTGTGGTAAAGCACGTTGTGAACCCCTCAGAGTGCTCTTCCCCCGAAAGATGCATCTTAGCCTACCTCTACGACCTCTACGTGTCATGTAGCCACCTCAGAAGTAAATTTGGAGACCTCTTCAGTAGTGCCTGTTCAAAAGTAAAGCAAACCATATATAACAATGTGATTCCTGCAAATTCTAACTTGCGATGGGATCCAGACTTCATGATGGATTTTATTGAGAATCCCTCGGCCCGTAGCGTCAACTACTCAGTGCTGGGCAAGATCCTTAGTGACAATGCAGCCAATCGCTACAGCTTCGTCTGCAACACTCTCATGAATGTATGTATGGGTCATCAGGATGCTGGAAGGATTAATGACATAGCCAATTTCTCCTCCGAGCTGACAGCCTGCTGCACTGTTCTCAGTTCAGAATGGCTGGGGGTCCTGAAGGCTCTTTGTTGTTCTTCAAATCATGTGTGGGGCTTTAATGATGTTCTTTGCACTGTCGATGTGAGTGACCTTTCATTCCATGATTCATTAGCTACTTTCATTGCTATTCTGATAGCACGACAGTGTTTCTCCCTGGAGGACGTCGTGCAACACGTCGCACTCCCCTCTCTCCTCGCCGCAGCTTGCGGAGATGCAGATGCAGAGCCTGGGGCAAGAATGACATGCCGTCTCCTGCTTCATCTCTTTCGAGCTCCCCAGGCCTGCCTGTTACCTCAAGCAACTGGCAAACCTTTCCCGGGAATAAGATCGTCTTGTGACAGACACCTCTTAGCTGCTGCTCACAACAGCATTGAAGTGGGAGCCGTGTTTGCTGTCTTAAAAGCAATTATGATGCTTGGAGATGCCAAAATTGGCAATAACAGTGTCAGCTCTTTAAAAAATGATGACTTCACCATGAGGGGTTTACGACGTGATGGGAATGCTGAGGATATCTGGACTGCCTCACAAAATTCAAAATCCTGTGGGAAAAGCATTTCCATAGAAACGGCCAATTTAAGAGAATATGCTAGATATGTACTGAGGACCATCTGTCAACAGGAATGGGTAGGAGAACATTGTTTAAAAGAACCTGAGAGATTATGCACAGACAAAGAACTTATTCTGGACCCTGTGCTCTCAAATATGCAAGCACAGAAATTACTGCAGCTGATCTGTTATCCTCATGGCATTAAGGAATGTACGGAGGGGGACAACCTCCAAAGACAGCACATTAAACGCATTCTTCAGAATCTTGAGCAGTGGACGCTGAGGCAGTCCTGGCTGGAGCTTCAGTTAATGATCAAACAGTGCTTGAAGGACCCTGGCTCTGGTTCGGTGGCTGAAATGAACAACCTGCTGGACAATATTGCCAAGGCAACAATAGAGGTGTTCCAGCAGTCCGCTGACCTAAACAATAACTCTTCTAATGCTGGCATGGGCCTCTTCAACCCAAATGGAATTGGAAGTACTGATACAAGTAGCACGAGACAGAATGGAATAAAGACATTTCTAAGTTCCTCTGAACGCAGGGGTGTGTGGCTGGTGGCCCCCCTAATTGCCAGGCTGCCGACTTCTGTGCAGGGAAGAGTGTTGAAAGCAGCTGGGGAAGAGCTGGAGAAAGGACAGCACTTGGGTTCTTCTTCCAAAAAGGAAAGAGACAGACAAAAGCAGAAAAGTATGTCTCTTTTGAGTCAACAACCATTCCTCTCACTGGTCCTTACCTGCCTTAAGGGACAAGATGAACAACGAGAAGGCCTTCTAACATCTCTGCAGAATCAAGTTAACCAGATTTTAAGTAACTGGAGAGAAGAACGATACCAGGATGACATCAAAGCACGACAGATGATGCATGAGGCATTGCAACTCCGCCTGAATTTGGTGGGAGGAATGTTTGACACAGTGCAGAGGAGCACCCAGTGGACAACAGACTGGGCGCTTCTCCTCCTTCAGATCATTACTTCTGGAACCGTTGACATGCACACCAACAATGAATTATTCACAACAGTTCTTGACATGCTGGGTGTTTTAATCAATGGAACATTGGCCTCTGACCTGTCGAATGCATCCCCAGGGGGATCTGAAGAGAACAAACGTGCATACATGAACTTAGTCAAGAAACTGAAAAAAGAGCTGGGGGACAAGCGGTCAGAAAGTATTGACAAAGTTCGACAGCTGTTACCTTTGCCGAAACAGACATGTGACATCATTACCTGTGAACCTATGGGCTCCTTGATTGACACAAAGGGAAACAAAATTGCTGGCTTCGATTCTATAGATAAAAAACAGGGTCTCCAGGTCTCCACGAAGCAGAAGGTGTCCCCGTGGGATTTGTTTGAGGGTCAGAAGAACCCGGCTCCTCTGTCCTGGGCCTGGTTCGGGACTGTCCGAGTGGACCGGAAGGTGATCAAGTATGAGGAGCAACATCACCTCCTCCTGTATCACACGCACCCCACGCCCAAGCCCCGGAGTTACTACCTCGAGCCACTGCCCCTGCCTCCCGAAGAGGAAGAGGAAGAGCCCACATCTCCCATCTCTCAGGAACCTGAGAGGAAATCAGCTGAGCTGTCAGATCAGGGAAAAACCGCAACAGATGAAGAGAAGAAGACAAAGGGAAGGAAGCGCAAGACAAAGTCCAGCTCAAGGGTTGATGAGTATCCGCAGAGCAGCATGTACCGAGTGCCTCCCAACTACTCACCCATCTCCTCCCAGGTGATGCACCACCCGCAGTCCGCCCTGTGGGGCTACAACCTCATGGGTCAGCCCCAGCAGCCCGGCTTCTTCCTTCAGAACCAGTCTGTCACTCCAGGTGGTTCCCGGTTGGACCCCGCTGGCTCCTTCGTCCCCACCAACACCAAGCAAGCTTTGTCCAACATGCTCCAGCGGCGCTCGGGGGCCATGATGCAGCCGCCCTCTCTGCATGCCATCACATCGCAGCAGCAGTTGATACAGATGAAGCTTCTGCAGCAGCAGCAGCAACAGCGGCTTCTCAGGCAAGCCCAGACGCGGCCTTTCCAACAGGGCCAGCCAGGGGACCAGGCTGCTCTCTTTGCTGCTCAGGCACGGCCCTCCCCTCAGCTCCCCCAGTATCCAGGACTGCAGCAAGCACAGACCATGCCCCAGGGCTACACAATGTATGGAACCCAGATGCCTTTGCAGCAGACCCCTCAGCAGCAGGCTGGCAGCGTGGTCCTGTCTCCTACCTATAATTCCAGAACCTATCCGGCCGCTCACTCCAACCCAGCGCTCATGGAAAGACTCAGACAGATGCAGCAGCCGCCGAGCGGCTATGTTCAGCAGCAGGCGTCACCATACCTGCATCCCCTGACCGGCTCCCAGAGGCTGAATCATCAGTCGCTTCAGCAGAGCCCTCTGGTGGGTGGAGGAATCGATGCGGTGCTGACTTCCGCACATCCAAACCTTCCCTCAGTGCCCTTGTCTCAGGACCCGATGAGACCCAGACAGCCACAGGTTCGACAGCAGCAGAGGCTTCTCCAGATGCAGCAGCCCCAGCAGCCCCCCCAGCCCCAGCAGCCTCCCCAGCCTCAGGGGTCCTCGCAGACCCAGAGTCAGACCCTTGGTCTCCAAACAATGCAGCCCCAGCAGCCTCTGTTCCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAACAGCAGACGGCTGCCCTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGTAACCAGCCACAGCAAGGAGTGACTCCCTACGGGCATCCTTCACACTTCTGAGTCTGGAAGAGGACAAAGATACAAACTTTTTTGTTTGCACTGAAAAATAGAAAATCACATTTACTGCATTAGTCATCTTTGGAAATGTCTGTTTTTTCATTTCTTTAAAAGTTTTCCTGTATTTTACGCCACATTTCATACAAAGGTGTTGAAACAAAAAGTAAAGGAAAGGGTGTGGTTTGGTTTCATTTCATTCAACTTGAAAAGTAGGTTTAAAAATGTAGACGTGTGGGCCTACTGCAGGAGGAGTTTGGTAGCAGACTTTTTAAAATTGGTGCTCTTACTGAATCTCGTAGTTATAGAAAGAAGGAATTATGGTGGATTTAAAATATTTATGTATCATTGATGGTTTTTTTTTTTTTTTTTTTGGCAACCTGTGCTGGACCAAACTACTGATTTGAAAGGCATGGCAGATCTTGGCAGGAAGGTGATCCATTTACTCTGCAGTCACCTTTGGTGGTGAAGTGGACATGAATTTGCATTGCTCTAATTTAAAATATTTGTAATTTCATAAGCACTTTATGAACTTCGTTCTTATTTATGTAGGATTTTTCTTTGCTTTTGTTGTGGTCAAAAGGTGCTGAAACAGATTGTTGCTTAGAACTTAAACTTCTTAGACCAAGAACTTAACCCAGGGCTTCTGTGAGAGCCACCCTGAGGTACACGGAAACCCGTTAGGAGTAGCTGTACTAAATTTTTCCATGGCAAGATCATTGACCAGAGTCTTTGTGAAGGTACAGCATGTAAATTCTAAAGGCCGGAATGAACCACAGTGGAATCGATCCAACTGTTTGCCAGATTTGGCAAAAATGACTCTGTCCAGTTTTGGTTCTCCTGAACCTGTATGCCAACTTGAGGGGAAAAAAAATCTCGCAGCTGGCCTGAGATTCCACAGTGCTCAAACTTGACATGGTTTCCAGAGTATGGCCCCCAAGTCCAGAGGGCTCTGGTTTTCATAAGAGATGTATTTGCTGTTTATTTTATATGAATATGCATTAATTTATCTTGAAATGATCACAAAGGATAACTCTGTCCTTCGGAAAAACCTGGTAATTTGCTTGGTGAGACAGAGAGGAAGTTATCTTAGGAAAAATGGAGCCCTCAGTTCCCGTTAAAGACTTTGAAATAGAATGGAGCTTGACATAGGAAGCCCTTTCATATACCTGTTTACACTGTAGGCCCCTCCCTAAAAGGGTTCCATTTATCCTCTGATTGATCCTTCTTGGCCCGGAAATAGAATGAGATCTCTGTTAGAATGAGTATCCTTTGACCACTTGTGGTCACCGGATACCAAAACCAGAGAAAGTAGGAAACAGGTTACCTCTTAAGGTGGAGCAAGCCGAAACTTGGTGTGATGAAGACACAGTGAAGCGTCCCCCACCCCCCATCTTCCTAAAATGATACACAGGGGCAAACGTAGTTCTCAGTTTTGTGTGCTGAGATACTTGAGCAAAACTGATGGCGTTTTCTCATTTTTCATTTATTAAGGCTCCTATAATTCTTCTTAAATAATAGACAAATATTTAAATAGATGCTGGAGAAATTACACTGGAAAATGCTAGTCTCTAGAGTTAGAAAAGATTAATCATAATGTCCTTAAATTAATTCAGGTTGAATTAAGCACGTGATATAAATAAATTCAGTGAATTACAAAAAGTAAGATTTTGTAGAGATGATCAGTAC EMBV3_11749 ACATGGTGCGCATTGCTCTGCAGTTAGACGATGGCTCTAGGTTGCAAGACACTTTCTGCT Gene GeneID:100300922|LOC100300922:XM_002696137:273_cdna Constitutive 0 NULL GeneID:100300922 19 GENE LOC100300922 NULL similar to alveolar soft part sarcoma chromosome region, candidate 1 EMBV3_22591 ACGTGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACT Gene GeneID:100337420|LOC100337420:XR_083936:258_cdna Constitutive 0 NULL GeneID:100337420 18 PSEUDO LOC100337420 NULL hypothetical LOC100337420 EMBV3_14440 CCACTGTGTGGTCGCAATACCCTGGATCACTTGCTGTGTGAGATTCCTGTTCTGATAAAG Gene GeneID:616517|LOC616517:XM_002697431:4_cdna Constitutive 0 NULL GeneID:616517 23 GENE LOC616517 NULL similar to olfactory receptor 134 EMBV3_23642 GTGTGGGCTGACCCTGCCGGGGCTAAGCTTACTCCTTTTCTTGCAGTGTATTTTCTAGAA Gene GeneID:519439|SOX18:NM_001075789:1126_cdna Constitutive 0 NULL GeneID:519439 13 GENE SOX18 MGC142871 SRY (sex determining region Y)-box 18 EMBV3_23138 GTTCGAGGCTGAGGAAGAAGTGTTTGTATTCACAGGCAAAACATGGGGATCGAAGGTCCC Gene BVV0102_146669 + 1 EMBV3_29721 GK000020.2:49533352-49951407 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41113 ATCCTGAGACTCTGCTTCCGCCGCCAAAATGTGGTGGACATCATGAGAGTCAATGTGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34933 TCCTCAGCTGGCAAACTCAGTGCAGATCAGGCTTATTTCTGCGTCACATGATCTTGGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09086 TCAACACACAATGGCAGCCACAAGTGCAGACAGAGACAATCTCACCTTCCACTGCAAAGG Gene BVV0102_211653 + 0 NULL GK000025.2:1284543-1288765 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144129 TCONS_00144132 TCONS_00144127 TCONS_00144131 TCONS_00144130 TCONS_00144133 1 XLOC_088466 Coding TCONS_00144133 XLOC_088466 NonCoding Coding - 25:1287012-1288400 - TSS108289 1176 3 TCONS_00144133_2 49 2 0.153568853640952 0.000113652816217071 2.60256507346092e-05 4.12868788843814e-05 1.24507852874878e-217 0.000121899219100667 9.16170470003801e-05 1.01849701855095e-114 0.000112329566549525 2.12119631751874e-05 2.13313901892864e-13 1.38618178761242e-73 1.69132143077332e-05 6.92456043228387e-05 3.56719133432576e-19 4.53152381215143e-05 0.00237228312398586 0.000450292164494023 0.00189454526883706 0.000334722861897696 1.96025663728189e-219 5.87497497018356e-06 0.000150168786060694 0.000946252327114505 0.000152451587971276 1.71892419873836e-21 1.16596377567884e-138 1.27440265471626e-123 0 0.000275033546162074 0.00058405841175996 XM_005224460.1 CRAMP1L PREDICTED: Bos taurus Crm, cramped-like (Drosophila) (CRAMP1L), 0.0 1076 99.83 0.508503401360544 NM_020608.3 Cramp1l Mus musculus Crm, cramped-like (Drosophila) (Cramp1l), mRNA. 1e-95 354 85.58 0.273809523809524 0 noncoding ATTTTTCAAAAGACCCAAGTGGAGAAGCCTCCCACTTCCAGCATCTCCCTCTGCCTTTGCAGTGGAAGGTGTGATTGTCTCTGTCTGCACTTGTGGCTGCCATTGTGTGTTGAAGTATGTTGTGATTAAGACCAGGTCAGTCTCAGAAAAGCCTTTCCCTCATCACTGACGTCATCAGGGATCTTTCTGCTGGCTCGTCTACCCTGAAGAGTGAGACTGAACAGCCCCTGCCTCTAGGCAGTTGTTTTTGTCTTGCTTCTTCATTGTGAATACTCAAGTGATGAGCAGCCCATTCTTCAGAAGGTAGAGAGGCCACAGAATAAAAAACACTTGAAACAAATGGGAGAAGGAAAATGCCAGTTGCTTTTTTTTCACGTTGAAATCTATCCCAGGTGCATTTAGGAGGAAATATGGCACTTTTGTCTTAAGAAAAACCCAGAGCAAATCTTTCCTGGCTGTCAGACAAACTCCTAACCCTGCAGTACCTTGTATGTCGTGTGAGGGGAGCAAGTCCTGGAAGCACTACAGCAGCCCGCCCTGCTGTTCTGTAGCAGGATAGCCTGCTCCCGGGCTTCTGGGAAGCAGAGATTATTGCTGTTTCTTCTAATAATCGTTAAGCCATATCATCTAAAGTTTTCGGCTTGTTTGAGATGTGAATTTGTTTTATAGATTATAAATATACAGTGTATGTATAAAGCAGAATGCCTGTCCTTCCTGATTATTTTTTGTACCATATTGTAAATTATATTATTTATTCTTTACCAATTTGGGGAATAAAAGGTGTTTGGTTATTTAATATAATAAACAAAAGCTGTTAAACTTCTTATGTTTAAATTTCCAGTTGAACTTGTAAATCTGTTTTTATTATTGTGCATAAATACAATACTAATACTTGGTCTAATAATTACTGTTTCTGCTTTTTTCTTTTTAACTGTGCACTCTGCAAACAGCCCAAGTGGCCATCATCCGGTGTGATCTCAGAGGAATCGATGGACTGTCTACAGTGTAATTTAGAAACAACACCACTGAATGTATTTTATTTTTGTTTTTTCCAACTAGGAATCAGCTGCACGCTTTATCCCTTGCTTCCCATTTCTTAGTGTTCTTGCCCCCTCGACGTGCAGGACAGAGGAACTGCTGTTCCGTTTCCTTTAGCCATGTATCCACGTGCCATTG TCONS_00144129 TCONS_00144129 s 5' 0 TCONS_00144129 TCONS_00144129 s 5' 0 EMBV3_25392 CATGGTACACAGGAGGATATGCGGAGGTTACATGCAAATACAGATGGCCCTGGAACTCAG Gene GeneID:509987|MTIF3:NM_001038066:37_cdna Constitutive 0 NULL GeneID:509987 12 GENE MTIF3 MGC134089 mitochondrial translational initiation factor 3 EMBV3_18939 CACGGGGATTTCACATGCCTCCTTGAATCCATTCCGTGTAGACTCTGGGATCAAACGGCT Gene GeneID:506200|CLPTM1L:NM_001082426:17_cdna Constitutive 0 NULL GeneID:506200 20 GENE CLPTM1L MGC148642 CLPTM1-like EMBV3_24387 TCCAAATCCAACTATCAAGTGTTCCAAAAGACCTGGCTAAGAAGTTACATAAAGCTGTTC Variant GeneID:525389|MED27:NM_001040546:130_cdna 750^827 3 EMBV3_19997 GeneID:525389 11 GENE MED27 CRSP8 MGC134262 mediator complex subunit 27 EMBV3_37791 GTTAACAGTAAGGAGACAAGCTATACTTGAACGATACAGGGATTTGGAAGAGCATGATTC Gene GeneID:617565|CLEC2D:XM_002687810:90_cdna Constitutive 2 NULL GeneID:617565 5 GENE CLEC2D NULL C-type lectin domain family 2, member D EMBV3_37849 GGTGAAGATGTTCCTCGTGACCTTTGACTTTTCGGACATGCCTGCTGCCCATATGACCTT Gene GeneID:510325|KIAA1539:NM_001014893:41_cdna UTR3_Alt 2 NULL GeneID:510325 8 GENE KIAA1539 NULL btKIAA1539 EMBV3_19071 TTTGGCCACTTCCATCAGGGCCGTGGACCGAGCAGTGGAGTCCATGCTTCAGGCTGGGCA Variant GeneID:506122|MTMR11:NM_001035030:58_cdna 835^923 1 EMBV3_24295 GeneID:506122 3 GENE MTMR11 MGC126934 myotubularin related protein 11 EMBV3_12898 TGGCGGATAGCCCTGCTGTGAATGGAGCCACTGGTTCCTGACGGGCATGACTGTGGCTGG Variant GeneID:282152|BCL2L1:NM_001077486:745_cdna 523^952 2 EMBV3_04904 GeneID:282152 13 GENE BCL2L1 BCLX Bcl-xL BCL2-like 1 EMBV3_29273 GATCAACAGTGCATTTGGTCTGGCCATCGTCATCTCTACCGCTGCCTTGGACTCTGTCTT Gene GeneID:518561|LOC518561:XM_002693398:53_cdna Constitutive 0 NULL GeneID:518561 15 GENE LOC518561 NULL similar to olfactory receptor 561 (predicted) EMBV3_20529 CGTGTCTTCTACCTGCTCCTGGTGCTTGCCACACAGCAGATCCTTCGTGTGAAACAAGAA Gene GeneID:516291|REC8:XM_002690537:584_cdna Constitutive 0 NULL GeneID:516291 10 GENE REC8 NULL REC8 homolog (yeast) EMBV3_08465 GAGAAAACACTTCATTAGAGTTTCCCCCGCCAGAATTTTCCTTCCGTATAGACCGTTCTC Gene GeneID:783029|LOC783029:XR_083764:5_cdna Constitutive 0 NULL GeneID:783029 9 PSEUDO LOC783029 NULL similar to Growth hormone inducible transmembrane protein EMBV3_32521 TTTCCATGATTTGTTAGCCTGTTTCTGTGCTATACTTCAAGTAGAGCATGCTGAAATGGG Gene BVT0101_015107 + 0 NULL GK000006.2:33228988-33473220 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41078 TCATCAGGGTCCTGGGAGAGCCCGTCAGCACAGAATCTGGGACTCCGAGACAGGACGGCT Gene BVV0102_356217 - 0 NULL GK000025.2:42035252-42170636 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149797 1 XLOC_091670 NonCoding TCONS_00149797 XLOC_091670 NonCoding NonCoding - 25:42040355-42041003 - TSS112332 648 1 TCONS_00149797_2 75 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000733652473677761 0 0.000116161781298178 0 1.10978841502384e-05 0 0.000778711789362264 0 0.000181099534527825 0 0 0 0 7.4916570868142e-06 0 0 noncoding 0 0 0 0 0.0363029424015852 0.786431774106362 0.0715090817640316 0.15622575421246 CCTTGCCCGTGGTAGACGCAGGGGTGGGCCTAGGAGCGTGCACACTAGGGCATGGGGGCTCGTGAAGACCCCAAGGGGGCTTCAGAGCTTGGCTGTCAGGTCAGGGCACTCTGGAGCCCGGGGACCCAGAGCGCGCTGTGCGGGCAGTGCACGTGAGCTCTGGGTGGACACCCCCTCGGCCCACAGGCTCCCAGCCCCTCAGGAGGGGTGCGGCGGGAACGTGGGGTCCCGGCCCTCCCCCCCGTGTGTGCTGTGGACGCTGCCTTTCCATGTGTGGCCGTGTGCAAACGGGGCCTCCCGCCCCCTGAGGCTGCTGGGGCTCCCACTCACCCCCAAGAACAGAGCGCTGACTCTGGGGCCTGCCCATGCCGCCTCCCACCCCTTCCAGCAGAGGCCGGCGCCACGGGCCTGGGGGCCTGGGAACCCTCTGCAGGGCCACCCGGGTGCCTCTCCCAGCCGTCCTGTCTCGGAGTCCCAGATTCTGTGCTGACGGGCTCTCCCAGGACCCTGATGAGGGCGGATGGCATGGCCACCAGCACATTATGCTGCTAGTAAAGAACTTCCCCCCGACACGCCTCACCTGCAGCCGCTGACACTTCCCAAAGTCCGTGAGGATGGAATCCGATCGGAATGCAATCTCCAGGACAT TCONS_00145676 TCONS_00145677 TCONS_00145678 TCONS_00145679 . 3' 5103 TCONS_00145676 TCONS_00145677 TCONS_00145678 TCONS_00145679 . 3' 5750 EMBV3_07219 CGGTCTGAGGTTTTGTTTCTGGCTCTCCGATGGCAGAACAGCCACTCTTCCTACTACTAA Gene BVT0102_003808 + 0 NULL GK000015.2:74889006-74915917 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060026 TCONS_00060023 TCONS_00060027 TCONS_00060029 TCONS_00060031 1 XLOC_036562 Coding TCONS_00060026 XLOC_036562 Coding Coding ALKBH3 15:74847515-74890756 j TSS44928 3109 1 TCONS_00060026_2 293 10 0.928330249768733 6.95396432759202e-05 0.000370070503206103 0.000142861375341552 1.15000303195011e-13 6.18878960713495e-08 1.19925211849267e-21 6.21645688544301e-05 6.75515530542369e-19 0.000267397433088729 3.29307432338445e-24 5.12294116524921e-32 1.59338649933089e-23 1.08008927217187e-24 8.55909022243253e-05 1.79534426206717e-15 8.67338724055355e-21 3.2502423740768e-34 2.38442939855018e-11 0.000276375997376166 8.60713964863879e-05 7.08211738061434e-18 1.62926621907714e-10 1.43382172197052e-11 3.26244058987931e-22 0.000305225535413875 3.11193200569573e-05 6.93240794044806e-05 2.27579082254446e-13 3.01725667522538e-06 1.25668483742176e-05 XM_005216455.1 ALKBH3 PREDICTED: Bos taurus alkB, alkylation repair homolog 3 (E. coli) (ALKBH3), transcript variant X1, mRNA. 0.0 2374 98.46 0.437439691219041 XM_005252824.1 ALKBH3 PREDICTED: Homo sapiens alkB, alkylation repair homolog 3 (E. coli) (ALKBH3), transcript variant X1, mRNA. 0.0 1326 84.28 0.387584432293342 TCONS_00060026_2 sp|Q32L00|ALKB3_BOVIN ALKB3_BOVIN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3; 0.0 593 97.61 0.996587030716723 1 coding 0 0 0 0 -0.183538966595437 0.280773160766966 -0.0415619509204843 0.428539018001648 CGTGGGCCTGCGGTTGGGAAGTGCTGGTGTCAGGCCGGGGTTCGGAGACCCCCACATACCGCCGGCGGCAGAACAGGCCCGAGGCAGCCCGGGGTTTGCTTTAGGAAGAGCGGCTTTAAAACCTGCGCGCCCGGCTCCTCTGGCAGATACCATTGTGTAGTTTGAATCAGGAATGAAATTTTCTGAAAGCTAAGAGTAGAAGTCTTGGTCAGCATGGAGGACAAAAGACGGCGAGCCCGAGTGCAGGGAGCCTGGGCTGGTCCTGCTAAGAGCCAGGCCACTGCTCAGCCAGCTCCCACTGCTGAGAACAATCTCCAACAGAGACCTGGTAAAGCCTGGATGAACAAGGAGCAGCATCTGTCTGACAGACAGTTTGTGTTCAAAGAACCCCAGGAGGGGGTACGCAGAGCCCCAGAGCCACGAGTGATTGAAAAAGAGGGTGTGTATGAAATCAGCATGTCACCCACAGGCATATCTAGGGTGTGTTTGTGTCCTGGCTTTGTTGACTTGAAAGAGGCCGACTCAGTGTTTGAACAGCTTTGTCGGGATGTTCCCTGGAAGCAGAGGACTGGCATCAGAGACGGCCCTGTATTTTCTTTCTTAGATGTAACTTACCAGCAACCAAGACTTACAGCATGGTATGGAGAACTTCCTTACACTTATTCAAGAATCACTATGGAACCAAATCCTCACTGGCATCCTGTGCTGCTCATGCTGAAGAACCAAATTGAAGAGAACACTGGCCACAGCTTCAACTCCTTGCTTTGCAATCTTTACCGAAATGAGAAGGACAGCGTGGACTGGCACAGCGATGATGAACCTTCACTGGGGAGGTGCCCCATCATTGCTTCACTCAGTTTTGGTGCCACACGCATGTTTGAGATGAGAAAGAAGCCCCCACCAGAAGACAATGGAGACTACACGTATGTGGAGAGAGTGAAGATACCCTTGGATCATGGGACCCTGTTAATCATGGAAGGGGCCACGCAGGCAGACTGGCAGCATCGAGTGCCCAAAGAGTACCACTCCAGAGAACCAAGAATAAACTTGACCTTTCGGACAGTTTATCCTGACCCTCGAGGGGCGCACTGGTGATGTGAGATCCTGGAGAGAGAAGCCGCGCTGAGACTGAGCAAACCTTCCTCCATGAAGACACTTCTGGAGGCTGGTCCAGCTGCTCTCGTGGCTGTCTGGAGGATGAGGATGGGATTTGCTTTCCAGCTCGGAGTCCTATTAAATGACAGCCTGCAGTTCGTGTTCAAAATACATTTACTGTGAGAACACTAATCCCTAATCACATTGTGAAATCACATATTTTCTTTAGGCAGATTAAAAACCGCTGTGGCTGTGTTTACCAATGATTTTGCCCATAAGCCGTTTTCCCCCCTCCTCGCTGCCATCTCCGGTTTTGGTTGAAGAAATATGAATGGACTTTGCCTCCGGGGGAGGGTAAATCCACATCTTTGCTCCTTGTGCCTGCAGCAGAGTGGAGATAGTAATACACACCAGTGACTCGGGAGCCTTCCGCAGGCAGACAGCTGCTGCAACCCAAACAGAGTTTTGTTGAAGTCTGCCTCGACTCCTGAACATGTTGGCTTGTGTGCTATGGTAATGGAAAGCTGCGTACTCTGGGAGCACTTTATTTAACCGAGTCTCCTTGCCTGTCCATTTCCTGGGAGACATGCAGACAGGTTTCAGGCCTCTGAGTGAAAAGCAGAGGTGGTATTCTCCAGTGTATCTCCAAGCTGCCCCTGGACTCCTCGTAATACAAGAGGAAACTGTCCTCTCAAAGGGAGGAGGAATTGAGTGATGTCATGAGAAATTTCAGCTGAAGAGCGGCAAATGCCCTGCTAGTGGCAGCTGTTCCACGTAGATTAGTTTCCCCCTGGAGAATTACTTGAGTCACTTAAACCCAAGCCAGATAGAAGCGGGAGCCGTCCTGCAGGGAACAGACTCAGTTACCTTAATAGTGCTTTTCCCTGTAGAGTTCAGGAGCCCCGTGACTAAGGCTTTCTTCTGACTCAGTGTTGTCTTCTGTACACACTCCCGAGATTCAAGGGTTAGTCTCTGATGTCACCAAGGTTCCCAAAACAGACAAAGCGGCTGCCCCTTGTTGCATCATAAAAGCACGTGTCTTCCAGATCCCTAGACTTAGGAGCAGCATGCTGGATCAGTCCAAACCAAGACAGAGAAAACCAGAGAGAAGGAGGATGGATTTAAACGGCTGAAAGTAGGGCGAGGGAGTTAGAGTTTCCCTCGTGCCCCATGGGGAAAATTTACCCAGCCTTCGTGCTTTTTGGTCTTGTTTCCATTCCATGCTGTAAGATTGATGAGCCCCAGGATCACGATAAGAGGCCAGAGGCAGATGAATGCCTTGCCTTGCCAGGCGCTTTTCTGTCGAGCTCTATGACTTCTTGAACCAGAGTCTCTTCTTTTAAATGTTGTTTCCTGTGTGTAGCTCCTTTGTCTAAAAAATACCAAATGTTTTATAAAATCTGAGTGTCACAGTAAGCCTTCCTGTGAGAGAGATACAAATTACCACAACAAAAAAACAAAGCCTATTTAATTCCTAGCTTTCCTGCAGTTCACACACACACAACCTGGCCAGGGAGGTGCCGCCAGCTTTGGCTGTGATTTGGATGCGTGACCCCGGGGAAATTCCTCTTCCATTCCCACAAGTGAAAGAGCCAGGAGATGACTCCAAGTCTTGTTACCACATCCCTCCCAATTCGGGCCGTGCATTGCGTCAGCTGCAGATTTGATCTCTTCCCTCATCACGGCCATGTCTGTCAGGGAAACATGTTCCTGACCGCCTGGCCCACTACCTGGGTTTCTTCTTCTGAGAGCAGCGGTCTGAGGTTTTGTTTCTGGCTCTCCGATGGCAGAACAGCCACTCTTCCTACTACTAAGGTAATGTCCTTTCTGAAATGTCGAGGAGGTGGTCGCTGTAGAGTAAAAGGGCCCTGGCAAAGGATACCCGTGCTCGGAGACTGCACCAACCTGTTGCTGTGTCTCGCTGATTGTAGATCTTAACTAACAATTCAGGCCAAAGCTCTTTTTGCCAGCATTACTTGTTAAAGTTGAGGGGACAAATAAAGCAGCTGTAGCA EMBV3_00951 TCGTGAGGGAGATTTCACACAATGGCTGTACCGCGTTGGTCTCCATGAACGACTGCTCTG Gene GeneID:100336925|LOC100336925:XM_002699434:123_cdna Constitutive 0 NULL GeneID:100336925 29 GENE LOC100336925 NULL mucin 2-like EMBV3_13865 GCCCTCGGGGAGCAGTCACACAGCCCAGAAGTGTGAACCAGTCAGAGCAAGAATTGACTT Gene GeneID:785457|POLE:XM_002694450:45_cdna Constitutive 0 NULL GeneID:785457 17 GENE POLE NULL polymerase (DNA directed), epsilon EMBV3_19882 CTCTTCAATTAGAACAACCCTATTTATAGCTGCCCAAGAGAGAAGAGTGTATGTTTGGAG Gene BVT0102_392488 + 0 NULL GK000023.2:9166229-9174333 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26856 ATCTTCAGCCGCCTCATAGTTTCAGTAAAGTTAATTCCACGCATAAAAGACTTCATAAAG Variant GeneID:618330|LOC618330:XM_002707689:134_cdna 574^648 1 EMBV3_18509 GeneID:618330 7 GENE LOC618330 NULL similar to cyclin I EMBV3_11282 AGATCAGCGCTCTGGACAGTAAGATCCACGAGACGATTGAGTCCATCAACCAGCTCAAGA Gene GeneID:777769|SMARCD3:NM_001078154:748_cdna Constitutive 0 NULL GeneID:777769 4 GENE SMARCD3 MGC152176 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 EMBV3_13403 TGCTTCCTCAAGAGGTTTTATCAGTCACCCATCACAGAGCTTTCTGGATTCCATTTATGC Gene GeneID:507526|CDH17:NM_001098902:18_cdna Constitutive 0 NULL GeneID:507526 14 GENE CDH17 MGC138926 cadherin 17, LI cadherin (liver-intestine) EMBV3_31686 TCCGCCTCATTCAGAGCCCACCTCGAGACGTGTACGGAAGGGATGGATGCGAGACGAAGA Gene GeneID:787246|LOC787246:XM_002683603:5_cdna Constitutive 0 NULL GeneID:787246 1 GENE LOC787246 NULL similar to Nedd4 WW domain-binding protein 2 EMBV3_09171 TGCATTGTATTTCTTTTTGGGTGTCCTGGGTCTTTGCTGCTGCACTGGACTTTCTCTAGC Gene BVT0102_395780 + 0 NULL GK000025.2:10652098-10702095 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16660 AAGAGAGCTTCATGTTGAGAGTCAGAGGCTCCCCCTTGGAGAAAAGCTCGTGTTTGATCC Gene GeneID:506058|LRRC67:NM_001075238:13_cdna Constitutive 2 NULL GeneID:506058 14 GENE LRRC67 MGC127941 leucine rich repeat containing 67 EMBV3_14764 CTGGAAGGACTAGCACCAGGAAACACGAATGGGCTGAAGCAAAACAGGGTTGGCTGAAGA Gene GeneID:506807|CXCR6:NM_001014859:92_cdna Constitutive 0 NULL GeneID:506807 22 GENE CXCR6 NULL chemokine (C-X-C motif) receptor 6 EMBV3_34258 TGTCGTTATGATGGTGACAGTGGTGGCTCTCTTTGCTGTGTGCTGGGCACCTTTCCACAT Gene GeneID:529752|QRFPR:XM_002688025:5_cdna Constitutive 0 NULL GeneID:529752 6 GENE QRFPR GPR103 pyroglutamylated RFamide peptide receptor EMBV3_01735 CCTTTTTTCTCAGAACTCCATCTTTGTACTCTTCAGATGAATATATAGACACTGTGGCAT Gene GeneID:338047|DDHD1:NM_176643:21_cdna Constitutive 3 NULL GeneID:338047 10 GENE DDHD1 NULL DDHD domain containing 1 EMBV3_03746 CAACCCAGTGGAAGGCTCTTCTGGTAGGCAGGTTACTATCACTGGTTCTGCTGCCAGTAT Gene GeneID:509917|PCBP1:NM_001015565:35_cdna Constitutive 1 NULL GeneID:509917 11 GENE PCBP1 MGC140822 hnRNP-E1 poly(rC) binding protein 1 EMBV3_17418 CTCCCAAGAAGCTGATCCGATACATCGACAACCAGATAGTGAGCACCAAAGGGGAGCGAT Gene GeneID:516091|CUEDC2:NM_001075737:144_cdna Constitutive 0 NULL GeneID:516091 26 GENE CUEDC2 MGC128745 CUE domain containing 2 EMBV3_11137 AAGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCTTGTACCTAGAGATTCCGCGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11774 TAAAACCCAGGAGGGATTAACTAAGTACCCTGGAATGAGTGCGCCTCCTAGAGTCGGCCT Gene GeneID:540760|RFXAP:XM_002691750:271_cdna UTR3_Alt 2 NULL GeneID:540760 12 GENE RFXAP NULL regulatory factor X-associated protein EMBV3_26558 CTGCGATTTTCTGACTGAATGGTTATACAACCCACGGCCGGCAATCCCACTCTCCCTCCT Variant GeneID:506290|IQCK:XM_002697981:43_cdna 540^617 2 EMBV3_05511 GeneID:506290 25 GENE IQCK NULL IQ motif containing K EMBV3_39702 ACACAGTGGGCCAAAAGATGAAGAGAGGCATGTTGGAGACCTGGGCAATGTGACAGCTGA Gene GeneID:507743|SOD1:XM_002692230:1475_cdna Constitutive 0 NULL GeneID:507743 13 GENE SOD1 NULL superoxide dismutase 1, soluble EMBV3_00502 TGGCAGCAGCGGCGGCAGCGGCAGTGGGTGCCTGTAGTGCGATGTTGTCTGAGCTAATAA Gene GeneID:444858|EIF4GI:XM_002684873:73_cdna Constitutive 1 NULL GeneID:444858 1 GENE EIF4GI NULL eIF4GI protein EMBV3_25023 TTCAGAGCCAACCTCTGTACATACTAATTACTTATTAGATACTTGACTGACTTAAGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26165 ACTGAAACGGAGGAGTCCCAGGGCTCAGCGGGAATGAGGACCTCTGTCGGCCAGAAGACA Gene BVT0102_249749 + 1 EMBV3_38755 GK000014.2:2267665-2281658 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054265 1 XLOC_032074 NonCoding TCONS_00054265 XLOC_032074 NonCoding NonCoding - 14:2269873-2270684 - TSS39942 811 2 TCONS_00054265_3 95 0.150431565967941 1 0 0 0 0 0 6.08777206219859e-06 8.82135294695863e-06 0 0 0 0 2.82266962147868e-06 8.81798309979579e-06 0 0 0 9.77000726406675e-05 0 3.09382298988767e-05 0 0 0 0 0.000395921729867378 0.000413431500611416 0 0 0 4.73744762603954e-05 0 1.48266938693628e-05 XR_246084.1 C10orf40 PREDICTED: Homo sapiens chromosome 10 open reading frame 40 (C10orf40), transcript variant X1, misc_RNA. 4e-11 73.4 77.19 0.13193588162762 0 noncoding GGCACCCACTTTTTATAGAGCTAGAATTCACACATCATAAAATCCACCATTTTAAAGCACACAATTCAGTGCTTCTTAGCATATTTCTAAGGTTGTAGAACCTTCCACACTAATTTGAGCATCGTCAAGACCCCCCCTCCCCCAGATGTCTGCTGACGCTGAGCACCACGCCAGGGAGGCCGCCTGTGTTGCATGGACCTCAGCTCAGGCAGCCTTCACCGCGTGAACAGAACGCCGTGTCCTTTCCACGATTCTGCCCTCCACCTCAAGGGGCTGGCAGCTCAGGGCTGGGCACGGTCCTGTGCTTGTCTTCTGGCCGACAGAGGTCCTCATTCCCGCTGAGCCCTGGGACTCCTTCGTTTCAGTGGCTACAGCTCAGGCCACCCTTGGAGACTCCCGGGAACTGCTGATGCTGTGGACCAGTGACTGCCTGCGTTCAAGGCTCCTCCCCTTCCTGAATGGACACATTCACGTGGTCATCTGCTCTTGCTGGGGGAGGAGGCAGCATCTGGGGAGGCCGGAACCTGTCAAGTTTAGACTGTGGCCGTGTGGACACGCACTGGTGCCGACAGAAGGCCACAGGCCAGGGATCCTGGCTCCATCTGGAGGCAGCAACTGAGCACAGCCTAGCTTGGGGGTCAGAGGGCCAGCTGGTCAGCTACGGCAGACATGAGGCTGCCCAGTGTCCCTGCTTTGAGTGCCAGAAATCCCTCCAGAAATTTCAGTGGACACAGAGCCAGCAGTGAACCACCACATTTCCTGAAGTCCCCTGATGTCGGGGGTGACCTGTGACTGATTCCAGCACGCCACC TCONS_00052606 TCONS_00052607 . 5' 1295 TCONS_00052606 TCONS_00052607 . 5' 1295 EMBV3_12131 TCTCAGAGCTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGAGCCCAGAAGATGC Gene GeneID:535152|DDX54:XM_002694516:427_cdna Constitutive 0 NULL GeneID:535152 17 GENE DDX54 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 EMBV3_18229 CCATCAGGAAATATTCGAGTGGCAACTGGTGTCCCCAGAGGCAAATTTTAGACAAATCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03882 CAGTACCCATTTTTACTTGGAGCGAGATTACTGGCTTGACTTCTCTCTTCCCCTTTGGAC Gene BVT0102_163910 + 0 NULL GK000006.2:20416640-20442287 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16182 CACCCACCCCTCACTTGTAACCTTATCTCCAGATGTTGCCAAATGTCTGTCAAATGTTGC Gene BVT0102_328644 + 0 NULL GK000012.2:30231503-30352989 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37026 AGCCTTTATCCGTTGCTCACATCTCACTTGACATCAGCGAATTCATAGTGGCGAGAGACC Gene GeneID:100139359|LOC100139359:XR_083561:2_cdna Constitutive 0 NULL GeneID:100139359 18 PSEUDO LOC100139359 NULL similar to hCG36740 EMBV3_12834 AGATCCCAAACAACTAGCAGAATTTGCTAGTGCACGTTCGAAGGCTGCGGGAAACGCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14592 TAGTCACTTGGTCGTATGGTGGCTGTTACTCACACAGCAAAACGCCTTCAATCAGCAGTC Gene GeneID:540780|CASC4:NM_001081737:135_cdna UTR3_Alt 2 NULL GeneID:540780 10 GENE CASC4 MGC152117 cancer susceptibility candidate 4 EMBV3_17102 AAGCTTGTCTCCAATGTCTGGACTTTTTGGTTCCATCTGGGCCCCGCAAAGCGACGTGTA Gene GeneID:505156|LOC505156:NM_001076803:8_cdna Constitutive 0 NULL GeneID:505156 17 GENE LOC505156 NULL transmembrane protein 131-like EMBV3_18892 TCGGATGGTGGATGTTGGTGGCCAGCGATCTGAAAGACGGAAATGGATTCACTGCTTTGA Gene GeneID:281789|GNA14:NM_174323:26_cdna Constitutive 0 NULL GeneID:281789 8 GENE GNA14 NULL guanine nucleotide binding protein (G protein), alpha 14 EMBV3_30823 ACCTTGGGCTGCTACAACAAAGGCTGCTCCTTCCGATACCATTACCCGTGTGCCATTGAT Gene GeneID:523151|TCF20:XM_002687956:54_cdna Constitutive 0 NULL GeneID:523151 5 GENE TCF20 NULL transcription factor 20 (AR1) EMBV3_14482 TGCAGCAGGACTTCTCCCTCCTGGATTTTTATCTCAACGACTTGAAGCACGCATCCCATG Gene GeneID:508335|LOC508335:XM_002698944:41_cdna Constitutive 1 NULL GeneID:508335 28 GENE LOC508335 NULL similar to Family with sequence similarity 35, member A EMBV3_27720 TCACTCTTGCTGTATTCTCCCTACTAGATGCAAGTTACTAGTTCCCGGCCACACTCACGG Gene BVV0102_030164 + 0 NULL GK000019.2:55594378-55644958 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097873 TCONS_00097874 TCONS_00097872 1 XLOC_058360 Coding TCONS_00097872 XLOC_058360 NonCoding Coding - 19:55637502-55641796 - TSS72422 3038 1 TCONS_00097872_4 93 0.30678077682686 3 0.293035173538318 0.00186140871905522 0.00171727092835168 0.00181000827583869 0.0012063690247591 0.00114826747470956 0.000456588320902785 0.00097515112784764 7.90172625893323e-05 0.00145840722493049 0.000918636567935622 0.000641160655832131 0.000317503899682801 0.000103585511387293 0.001976443004113 0.00143845315487137 0.0102147915269507 0.00360680096875286 0.00402726774952314 0.000618589492713769 0.000833535902217989 0.000558342148389723 0.00267320441248326 0.00345019614305854 0.00307614083876743 0.00147414346014498 0.00234425367635359 0.000573683407947354 0.00106315471811195 0.000641976279958908 0.00138036089287028 XM_005221228.1 MFSD11 PREDICTED: Bos taurus major facilitator superfamily domain containing 11 (MFSD11), transcript variant X1, mRNA. 0.0 5467 99.93 0.999670836076366 NM_001242532.1 MFSD11 Homo sapiens major facilitator superfamily domain containing 11 (MFSD11), transcript variant 1, mRNA. 9e-172 609 78.08 0.261356155365372 0 noncoding CACTGACAGCAGCGCTTACATCAAACCCAGAGCAAAGAAATTGCCATCTTCTGCAGCTTCCTGTTGGGTCTTGGAGACAGCTGCTTCAATACTCAGCTGCTTAGTATTTTAGGTTTTCTCTATTCTGAAGACAGCGCCCCGGCTTTTGCCGTCTTTAAATTTGTGCAGTCCATTTGCGCAGCCGTGGCATTTTTCTACAGTAACTACCTTCTCCTTCATTGGCAACTCCTGGTCATGGTGATATTTGGGTTTTTTGGAACTGTCTCCTTCTTCACTGTGGAGTGGGAAGCTGCTGCCATTGTAGCCCGGGGCTCTGACTACCGAAGTATTTGAAGAAGGGTGCCAGTGAGAGGAGGCCGCCTCTTCAGACCCTCGGCTGAGCGGCAGGGCCGGGCAGAGGAGGCCGCTCTCATCTTCACCATACCTTGGAGGCTGTTAGGATGGAAACTCCGAGATCTAAGACTGCTAAATCTGCCAGAGTTGGTATTCAGGTTTACAAATATTGTTTAGAAACTAGTGAAATAAGGGAACTTGTCCTGTCAGTCATGATGTTCGAAGATGTTGTTTTTCAGTTCATCTGTCTCACGTTCCTTATGGTCATGTTGTAAATGTAAATGTTTTCTTCTGCCCCCCGTTCTCGTTGAGAGATCATGCTTTGATCGAAACTACTAGGCCATATGTGTATGAAGACTCGTATGTCGTGTGAAGACTCCTAGGTGTGTGGCTGTGTGTTACTATGTAGTAACAGGGAGCATGTGCCACCCCATGTGTGTCTGGGAATGACGTTTAAGTAAATCATGTAACACTGAAATGGAATCTTTGAAAAGATTTGCACATTTTTGATAATTTTTCTTGTAGTTCCTAGCAAGAGGGGTACTAATCAAGTATTATGAAATGAGGTAAAAATTGTCTTAAGTTTTAAAAATAGGAATCTTACATTTGTAAATGAACAGAAACACACTTAAGAAAAAAATACACATTTATTGATGGAGGCTTTTGCTAGTAATTTTTCTAGAGGATGCAGTGCATAAAAAACAAACAAACCCAGAACACGTGGTGAAGTCTAAGCTGTGGCGGCAGGCTGTTGTCACTAAGAAACACTGTTCCATACGCATGTCTGGGAATGGAGTGTAACTGTTTGGGGGAGATGTTTAGAATGGGAATGTTAACTTTAATCCATAAGAGCTTTAAACAGTTATTTTAATTGAGATAATTCAGAAATCATAAAATTCATCATTGTAAAGTATACAGTTTAGTGGCGTTTCAGTACATGCACAAGATTATATAGCTATCACTACTATCTTTTCCAGAAAGTTTTCATCACCCCGAAAGAACCCCCCGTGCCTACGGGTAGTCATTCGCCATTCTCTTGCCTGGCACCGGTGGTCAGTAATCCGTTTCTTGTCTCTGGATTTGTTTCTTCTGGATATTCCCTATCAATGGGAAAGCTCACTTTTAAAATTGAAAATTAACTGAACAAATCAAGAGTTTTATGGCAAAGTAGATTTAATCAAGAAGACAAACAATATTTTGCTTTCCATTATTTTTTAACACCTGCTTAGTAATTTTATGGAGTGTGAGTTTTAGACTTGATGGCAATTGCAGGGAATTGTGGTTAGCTGGAACCCTTAGAGAAATTGCATTTGTATGGAACACTGAACTCTTTTGCTCCAAGTTGTAAAATTGTGGTTTTCTTTCTTGAAGTTGAGATAAACTCAGTTGATAGTTGATTTTATATAAATTGTAAATGCTGTTTCAGAATTAATGCAAATGAATTTATTATCTCTTTAAGCACATTATTGTCTACTCAGATGTATTTGTTTTCTATCACTGTATGACAGATTACTCCAAAACTTAGCCATTTCCCTTGTGGTTCAGATACTAAAGAATCTGTCTGTAGTGCAGGAGACCTGCGTTTGATCCCTGTGTCGGGAAGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTCTTACTTGGGAGAATTCCTGGACAGAGGAGCCTGGCAGGCTATAGTCCATGGGGTCACAAAGTCAGACGTGACTGAGCAACTAACAGTTTTTTTCACTAAGCACATTATAGTTTACCCAGATGTTTTTGTCTTCTATCTCCGAATGACATATTACCCCAAAACTCAACCACTTAAGACCTACGTATTCTCTCATAGTTTCTGCGGGTCTCGGTATGGCTGGACCAGGCCCTCCAGCCAGCCCAGGCTCTGTCACAAGGCTGCCACCAAGGCGTGACCCGGAGGAGGACCTGCTTCTCAGCTTAGTCTCATCCTTGGCAGGAGTTGGTTCCTCACAGGCTGTTGGACTAAGAGTCTTAGTTTCTCACGGCTGTCCTCATCAAAGAAAGCAAGTGAGAAAAGCCAGAGGGAAGTGCCAGCAAGTCATAAGTCACCGTCTTTTATCACTTAATCTCGGAAGTGACATCTCATCACTTTTGCTGTATTCTCCCTACTAGATGCAAGTTACTAGTTCCCGGCCACACTCACGGAAGGGGGTGGGGGTTACACCAGGGAGTGACTAGAACCAGGATCCCCAGGACCGTCTCGCAAGGCTGCCTGTCTCACGTTCAGCTGGGAACTGGGCCCTGCATTCCCGTGTTCCTCACTCTGCCAGGCTCGGGCTCCCTTTGCTTATGATAGGTCTGTAGAATTAGGCTGCAGAGGTTCAGTAGCCTCTGTTAATACTACTGAGTGCATTCTCCCAGGGCAGCCGCAGCCTCTTATCACAACTGGTAGGATTCCTGGTAACTGCTTTCACAAGGGAAAAGAGAGTGAGGGGAATGTGTCAGGAACACGACTTCTGGGCTGCCTCCCTCCTGTTGTTATGTGTGATGTTCTTCACCTTAAGTTCTGTACTCACATTTTGTGTTTGGGTGGGTTTCGTTTTGTTTTTTTACTCAGTCTTTATGTCTATAAATAGTGTTGGCCTTGGTGGGCTCTTTATTTGACTGATAACAGCTCGTTTGAATTTGTATCATTATTTGAATTTGAAATGTGGTATGAAATAAAGAATTTAATTTTTATG TCONS_00097873 TCONS_00097873 TCONS_00097873 s 5' 0 TCONS_00097873 TCONS_00097873 TCONS_00097873 s 5' 0 EMBV3_06958 TCCATCATTGGCTCTGCCCGTTCCCTGGGTATTCGTGTGGTGAAGGACCTCAGTTCAGAA Gene GeneID:515990|MRPL11:NM_001014932:18_cdna Constitutive 0 NULL GeneID:515990 29 GENE MRPL11 MGC134492 mitochondrial ribosomal protein L11 EMBV3_36056 AGCAAAGCCAGGATGGGAGCTGAAGACCAGCCTTTTGACTTGGCCACAGAGATGTGAGTA Gene GeneID:517831|KLHL18:NM_001102043:125_cdna Constitutive 0 NULL GeneID:517831 22 GENE KLHL18 MGC148697 kelch-like 18 (Drosophila) EMBV3_07079 ATCTCACCTGCTGCTTCGTCTCTTTGGTCAGATTCCTGGCACGTTTTATTTCCTGTTGTT Gene GeneID:515039|CCDC88C:NM_001102017:241_cdna Constitutive 1 NULL GeneID:515039 21 GENE CCDC88C MGC160122 coiled-coil domain containing 88C EMBV3_17222 AGGGGCTAAAGACATGTGGAGAGCTTACCAAGACATGAAAGAAGCCAACTACAGGGGTGC Gene GeneID:281474|SAA3:NM_181016:7_cdna Constitutive 0 NULL GeneID:281474 29 GENE SAA3 MGC133567 serum amyloid A 3 EMBV3_11974 CGGCAGCACAGGTGAGCAGCTGAGGCGCAGGTTCCTGAATAGTCTGGGCACCATCTTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26320 GCCTCGTATGCAAAGTGGCTGACTTCGGGCTGGCTCGACTCATTGAAGACAACGAATACA Gene GeneID:535742|SRC:NM_001110804:1222_cdna Constitutive 0 NULL GeneID:535742 13 GENE SRC NULL v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian) EMBV3_09277 CAACATCTCAACCACACCTCCATCCTGTCCACGTCCACCCTGGGGTAAGGACAGACTTAA Gene BVV0101_045629 + 0 NULL GK000023.2:50682356-50703497 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34039 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25724 CAGGTGCATCAAGTCACCATTCTGTACACGTTAGAACAGAGGATGTTGTATGTCCTTAAC Gene BVV0102_387533 - 0 NULL GK000011.2:1-107310763 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026541 TCONS_00026545 1 XLOC_015058 NonCoding TCONS_00026541 XLOC_015058 NonCoding NonCoding - 11:107300534-107301909 - TSS19019 1375 3 TCONS_00026541_1 100 0.56 1 0 6.76161527810795e-05 0 2.37942654649987e-05 4.5295381487972e-05 0 0.000687116692248625 0 3.60912289787253e-05 8.60742443780436e-06 9.69725078646065e-06 3.50741816274769e-06 2.53704924019842e-06 6.60803926496963e-06 0.000114606041155072 2.09818040156635e-61 0.000632529777036484 6.03720027779317e-06 2.00773967455647e-05 4.05872217978298e-11 3.48675148421785e-06 0 0.000816216796692112 0.00115128570158574 0.00146202007069306 6.21460569011914e-05 2.56199416114694e-06 3.97038409724181e-05 0.000186418219888395 7.0503682142616e-05 0.000716289705541259 XM_617702.5 DGKH PREDICTED: Bos taurus diacylglycerol kinase, eta (DGKH), transcript 3e-66 257 85.59 0.160727272727273 0 noncoding 0 0 0 0 0.0206147311000119 0.888296020826627 0.0406630583540545 0.5408944757086 GGAGCCCGGTAGGCCGCAGTCCACGTTGTCACACAGAGTCGGACACGACGGAGTGACTTCCCTTCCCGTTTTCCCTTTCACGCCTTGGAGAAGGACATGGCGACCCACCGCAGTGTTCTTGCCTGGAGAACCCCAGAGACGGGGGTGCCCGGCGGGCTACCGTCTACGGGGTCGCACAGATTCGGACACGATGGAAGCGACTCAGCAGCAGCAGCAGCAGCAGCAGCAGCATTATCATATTCGAAAGTCGCCATGATTGTGGACATGACGCATTCACTTCCCATACAATGGAAGAAGGACATGGCAACCCACTCCAGTAGTCTTGCCTGGAAAATTCCATGGACGGAGGAGCCTGGTAGGCTACAGTCCGTGGGGTCGCAAAGAGTCCAACACGACTGAGTGACTTCACTTTCTTTCGCATACAGTCATGACACGTATGGGTTGTGATCAAGCTATAAGCTACCGCTTGGGTGGTCATGAATGATTCTTTTGCAACAGACAGGTGCATCAAGTCACCATTCTGTACACGTTAGAACAGAGGATGTTGTATGTCCTTAACGAAGAACATTCTATTTCAATACACCGGGACATGAAACACATAACATCACCTAGTTTTATTATCTTTCAATGAATGGTCAGTATTGGCTGCACACCAAAAAAAAGGGGGGGGGGAGAAAGAAAAAAGAAAAGAAAGCTTTATTGTGTGTGTGTGGGTGGGGGGGTCTTAGATATTGCCATGCAGGGACACAGATTTCAATAAAACCCAGGGAATGTTCCACAGGAAAGAGTCAGGGGCCTAGAAAGCTGAACCTCGTGAGGTTGTCAAGCCAGCTGAGAGCAATTAGGATTTGCTGTCATGCAACAAAGGACATGTTTCTTCTTCCAGGGTAGACGGTCACAAGGTATTTAGGGAAAGGGGAGGGTGTGAGAGGTATCTTGAATTTCGGGAACACTGTTTCCTTAGATGATCTGGAGGCCTCTGGGACCCAGTCAGTGCTCCAAGTGTACATTCCATCCAGACTGAGACACACAGACCTCTTCCTCGATGGCCTCCCCTCTCTATTTGGGGGAGCTCTCTCGGCCATGCTGATTCCACTTGGATGTGTCTTTCCCACGTCATACCCTTTGGCATTCAAAGATATCCTTCCATCGTTTTCTAAAGAGACCCGGTGTATGTATCTTTTGAGAGATGATGAGCATCAGACACGATCCCTCTCCGTGGCGTGGTTTCGGGCACGACACACCAATTCGGGGACACAGACATTCCACGCCCCTCTCGGCCATCGAGAAAGGCCGTGTACGGCACGTGATGCCACGGGACCGGTGAGGTCCTCGGGTTCAGCCCTCCCTCGACTTGGCTGTGGTCTTTGGTTTT TCONS_00026535 TCONS_00026538 s 3' 33002 TCONS_00026535 TCONS_00026538 s 3' 33002 EMBV3_26016 GTGGAGAAACTACATCACCTGCAGCCCGCGGTCTGTATGCAGTGAAAATTCGAGCTGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14681 GGTGATGTGCTTCCCAAAGCCAAACTTGCACCAAAACAAGGTCATGGTAACTGTGGTCCC Gene GeneID:100294852|LOC100294852:XR_083766:17_cdna Constitutive 0 NULL GeneID:100294852 9 PSEUDO LOC100294852 NULL hypothetical LOC100294852 EMBV3_28050 GGCTCAGTAGATGCTTAAGGAGTCAAGGTACATTAGAGCAGGCAGGAACGCAACAGTGTC Gene GeneID:784685|SLC48A1:XM_002687316:118_cdna Constitutive 0 NULL GeneID:784685 5 GENE SLC48A1 NULL solute carrier family 48 (heme transporter), member 1 EMBV3_43791 GTCTACAGCATGGAGATTGGCTTCCTAGAGTGAAAGAGAAACTGTCAGACCTGGAGTCCG Gene BVV0102_240715 + 0 NULL GK000007.2:65649629-65847783 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213982 1 XLOC_130585 Coding TCONS_00213982 XLOC_130585 NonCoding Coding NMUR2 7:65531372-65811565 x TSS160169 824 1 TCONS_00213982_1 72 4 0.997073435358611 0 0.000802445460489223 0 0 2.13217121235572e-149 0 0 0 0.000324655635013069 0 0 0 0 0.000124770900787418 0 0 0 0 1.36151300509132e-05 4.73147498712339e-05 0.000837794262914221 0 0 0 1.36856183898025e-321 1.18575755001899e-321 1.08403314378577e-05 0 0 0 0 noncoding 0 0 0 0 0.0754661747021837 0.497313288142576 0.0404105941461733 0.567684467165858 GCGGAGTGAAAGGGGCACACCTGTGGCAGGTTGCGTTCCCCAGGAAGCTGACTCCAGGGGAGACGCGCGGGCCGGAAGTTCACTCGAGTTGCTCTCAGGAGCCGCTCTTGTGAGAGGAGAGGCAGGGCAGCAGGTTGGGTGAGAGGACAGAGGCCCAGCGGGTAGCTCTGCGTGGAGAAGACCCTTCAGCACTGTCCTCAGTTGGCCTGAGGCAGCCCTCCTGTCTGTCAGTCACTGCAGGCGGGCACACAGCTGCCCAGACCTCCATTCTCGGAGGGGCGTCTGAGCGGCACTTCACAGGTTTGAAGCTTTCCTCCTGATTTCTGTTTCATGGTCCAGTTCATGTCCCAGCCTTTCCATGAAGCTCTTAAAGGAGATCATAGCTTAACTTTCCTACGCAGGCAAGATGTCTCGACATCTTGCACAGGGATATTCACACAAGTAGAGAGGCTGCGAGATGTCCACCAAGAGGACAGGATCAGGCCTCTGACCGGGAGGTCGGCGTCTCTTCTCCTGGTTTACAGCATGGAGATTGGCTTCCTAGAGTGAAAGAGAAACTGTCAGACCTGGAGTCCGAACCAGCATATCATCACCTCTGGAGAATTGTGTTCATCAAAGCAGAATAGGGTTGACTCAGATTCAAACAGATCTGCCTGTCAATGGGAGGAATTGTTGTCAGCCACAGTTGAGATAAACTACCATACCTAGTTCTCAGAACTTAAATGATACGAAGTATAATTTAGAATGCATGGTTAATGACAGAGACTCAAACAGTTGATCAGCTAAACAATATTTGTGTTGGTGTGACTGTATGTGTGTGTAGG TCONS_00217513 TCONS_00217514 r 5' 47035 TCONS_00217513 TCONS_00217514 r 3' 100596 EMBV3_07026 CCCATCACTTGATCACTTTTGCACGTTCCCTGAGCTTCTCCCCAATGCTGCCTAGTGTGT Gene GeneID:505080|TGM3:NM_001101848:865_cdna Constitutive 0 NULL GeneID:505080 13 GENE TGM3 MGC155017 transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase) EMBV3_02285 GTATTGCTCCTGGGACTAAAAGATAAAGAGGTACTGCTAAAGTCAGACAGCCCAACAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30371 CCTGGCTCATGTTGCTCACAGGCAGAGTGTCTCTGGCACAGTTCGCCCTGGCCTTCGTGA Gene GeneID:530442|ZDHHC24:XM_002699358:257_cdna Constitutive 0 NULL GeneID:530442 29 GENE ZDHHC24 NULL zinc finger, DHHC-type containing 24 EMBV3_15446 CCCCTGGGAAGGAGTAAGCTCTTTTCTATACCTCTGGGTCTACTATATTTAATTCTGCTG Gene GeneID:618122|SYNC:NM_001109803:196_cdna Constitutive 0 NULL GeneID:618122 2 GENE SYNC MGC152040 SYNC1 syncoilin, intermediate filament protein EMBV3_15497 GCCCTGCAGGAGATCGAAGACAGTCAGTATGAGATCACTGAGCTGCCCGACTACAACAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36478 GCAGGCAAACCATTCCGCCCCCAGTCTTTATCCAAATATTCCCGTCACTATAGCCCGGAA Gene GeneID:532546|AAK1:XM_002691441:131_cdna Constitutive 0 NULL GeneID:532546 11 GENE AAK1 NULL AP2 associated kinase 1 EMBV3_16259 ACCCTGAGCTGTGGTTAAGCTCCTGCCCCTTTGGATGGCTGCTAGACATTTTAGGACTCT Gene GeneID:529141|TAPBPL:NM_001102121:32_cdna Constitutive 0 NULL GeneID:529141 5 GENE TAPBPL MGC140348 TAPBP-R TAP binding protein-like EMBV3_30028 CAGTGCTCAGCGGATTCGTAGAGAGGAGAGTGTACGTGGTAGAAGACCAAAGAAGGGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06257 ACATGCGCTCTTCTGCACCACACTCTGTGCTATACCAGAAAAACCAGAGAAGCCCCAGCT Gene GeneID:523023|LOC523023:XM_002692584:304_cdna Constitutive 0 NULL GeneID:523023 14 GENE LOC523023 NULL similar to testis-specific serine kinase 5 EMBV3_36926 AGCAACTGGAGGAAGCCAGCGACTATGTGAGAAGTCCATCACTCTAAGACTACCATGCTG Gene BVV0102_259115 + 1 EMBV3_30120 GK000010.2:8822376-8893214 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015871 1 XLOC_008578 NonCoding TCONS_00015871 XLOC_008578 NonCoding NonCoding - 10:8865123-8877027 - TSS11110 918 1 TCONS_00015871_3 79 0.800653594771242 2 0.923044610602369 7.48935514564693e-08 5.78540782913824e-08 5.30517357132134e-08 0.000434201949896538 0.000372365996577758 2.00335203557326e-08 3.04051110915843e-08 0 4.52160830805941e-08 0 0 0 0 2.41282559191971e-08 0 0 0 0 0 0.000654119079407418 1.66904680628359e-08 0 0 0 2.26420754433024e-05 0.000913378891093214 8.7278787839972e-10 0 0 0 XR_233040.1 LOC101908852 PREDICTED: Bos taurus uncharacterized LOC101908852 (LOC101908852), 2e-73 280 75.17 0.456427015250545 NM_001145414.1 CHM Homo sapiens choroideremia (Rab escort protein 1) (CHM), transcript 7e-09 66.2 72.80 0.133986928104575 0 noncoding CTAGCCTCTCCCTCTCTGCTTTTTTCCCCTTCACGGCCTCTTTCCTCCGGAGGGTAGCTGAAGGCAGAGAAACTAGCCCTCCCCGTCCAGGGAAGTTTGGATTTGCTAAGGGATTCTATTGGGATAAAGAAAGCAACTGGAGGAAGCCAGCGACTGTGTGAGAAGTCCATCACTCTAAGACTACCATGCTGTGAGGAAACCAAGCCAGCCACATAGCTCTGGTGAATGGAGAGGGATGCCCAGCCCGCCCCAAGCTGTTCAGCCGTACCTGTGGATCCACCCCAGTGAGCGAGTGAGGAAGCCCTTAGACATTCCAGCAGCAGCAGACCCCACATGGAGCTAAGAACCACCCAGCTGAGCCTGTCCCAGACTGTACAATAGAATCATGAAAAATCATACATTGTTGTTTTAAATCGCTAAGCTTTGGACCAGTTTATTCAACAGAAAGCGATAAAAAATGATTGTCTATTATTTGTAACAACATGGATGGACCTAGAGACTGTCATACTGAGTGAAGTAAATCAGACAGAGAAGGAGAAAGATCATATGATATCTGTTATATGTGAAATCTAAAAAGAAATGATACTAATGAACTTACAAAACAGAAAGAGACTCACGGACTTAAAGAACAAACTCATGGTTTTGGGGTTGGGGGAAGGATGGGGAAAAGGGATAGTTAGATGTTTGGAGTGGGCCCATACGCTCTGCTATATTTAAAATGGGTAACCAACAGAGACCTACTGTGTAGCACGTGGACATCTGTTCACTGTTATGTGGCAGCCTGGATGGGAAGGGAGTATGGAATGGATACATGTATGTGCGTGGCTGAGTCCCTCCACTGTTTACCCGTAACACAACATTATTCGCTAATCTGCTATATCCCAATACAAAATAGTGTTTTTAAGTTGCCTATTAAAT TCONS_00015867 s 5' 42659 TCONS_00015867 s 5' 43434 EMBV3_23405 TCAGTCACCTGAGAAGTCCCTAGCAAAACCTACTGAATCATTTTGGGTGGGGTCCAGCAA Gene BVT0102_206960 + 0 NULL GK000025.2:28235620-28247948 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145048 TCONS_00146787 TCONS_00145047 2 XLOC_088728 XLOC_089211 Coding TCONS_00145048 XLOC_088728 NonCoding Coding ASL 25:28246415-28249890 x TSS108783 891 2 TCONS_00145048_1 50 0.292929292929293 4 0.744674726540012 0.00483306561564803 1.20192221356033e-100 1.16657548819573e-113 4.58662961325399e-05 2.74555086434503e-305 9.36258927610983e-05 6.58684889227611e-179 8.81714086668316e-05 6.77470416032784e-22 0 0 2.55103834721309e-252 4.14828648068901e-98 2.4823721562961e-209 0 7.89343052283455e-05 0 7.886301524111e-21 0.000655512057181307 0.002376229312955 2.45568093725552e-05 0.000124927055627171 0.000101097413932528 0 4.94206680739555e-05 1.63337738426842e-05 0.000227601227109552 1.52282889623772e-317 0 0 XM_005224888.1 ASL PREDICTED: Bos taurus argininosuccinate lyase (ASL), transcript 2e-53 214 92.00 0.167227833894501 NM_133768.4 Asl Mus musculus argininosuccinate lyase (Asl), mRNA. 4e-37 159 84.35 0.163860830527497 0 noncoding TCCACAAATCAGCATTTCTGACTCTTACTTAAGAGTGTACAGGAATCACCTGAGTAGTTTGTTAAAGTGCAGATTCTGAATCAGTAAATCAGGGCGGGCCTCAGGTGAGGTGGATGTTGCTGGTCTGCCCCAACTTTGTGTAACAAGATTAAGATCAGTGCCTCTCAAACCTGAGCACACATCAGGATCACCTGAAGCACTTGTTAAAACAGATTGCTGGACCCCACCCAAAATGATTCAGTAGGTCTTGCTAGGGACTTCTCAGGTGACTCAGTGGTAAAGACTTTTCTGCCAAGCAGGAGATGATTTTGGTGAGATTTGTGTATTAATAAAAGAGGTCTCTGCATCTCTGCTGGCTCTGGGGACCCGCTGTTATTGAACAGTGACCACGTGCCAGACCTCACTTCAGGCTCTTTGCAGCCTCAACGTGACCATCCTTTCCCTCGACCACAGCATGGGCAGACCCCTCTGGCACCACCTGTCTGTGGGCCTCACCTCAAGGGCAGGACCAAGCACATACCCCCTCCCTCTGCCCCAGGTCTTCCGGACCCACCCACACCTGTCTCCTTTCAAGATCACCCTCCTGGCACACCACCCCCAAGTTTGAGAGCCTCGGGGAGAAGAGGTGTGTCTTGCCTGCAGGGTAGAGATGACACCAGTGGCCACTTGGAGGACAGCGCTCATGGTGTCGGACACTTCAAACACGGCTTCCTTGTCTTCCTGGGAGACACGTGGCAGGAAGTGCTCGGAAGTCCCTTGAGTGTCATCAGGAGCCCAGCACACTGCGGGGAAAGGGAGGACTTCGGAGCTTGTCCAGGATGTTCCCTCTGGACCCTTGGGTCAGCCCTGAGGCTGTGCCCCCTTCCCTGCCTGGCTCACCCGCCCAAACAC TCONS_00146787 TCONS_00146790 TCONS_00146791 TCONS_00146791 r 5' 0 TCONS_00146787 TCONS_00146790 TCONS_00146791 TCONS_00146791 r 5' 0 EMBV3_31759 GTACCGGTGTCATAATTCTATTAATTATCCTTTCAATGTATCTCCCGTTTTGGCAGACAC Gene GeneID:529615|HORMAD1:NM_001046305:121_cdna Constitutive 0 NULL GeneID:529615 3 GENE HORMAD1 MGC134082 HORMA domain containing 1 EMBV3_08754 GGGAGTGTCGCTGCCAAGGAAGGCATTGCTGCTGGAGGTGTAATGGATGTTAATACTGCT Gene GeneID:511302|LOC511302:XM_002685059:163_cdna Constitutive 0 NULL GeneID:511302 1 GENE LOC511302 NULL similar to ribosomal protein S12 EMBV3_38021 AACTAACAGACCGAAAAAATCCAGAATCAGAATGTCACAGGTAGATTAATGGTTGGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25239 ATGATTGCTCTGCTTATACTGGTTGGACAGGTAGTCAATGCTATCATTGAATCGGGCAAA Variant GeneID:541142|LANCL2:NM_001102256:44_cdna 121^476 3 EMBV3_27423 GeneID:541142 22 GENE LANCL2 MGC148337 LanC lantibiotic synthetase component C-like 2 (bacterial) EMBV3_27524 CTCACTGGCATTCCTCTTCCGCTCATAAAGGTGGTGACTCTGTGGTACCGAGCACCGGAA Variant GeneID:519217|CDK2:NM_001014934:1037_cdna 521^691 2 EMBV3_17267 GeneID:519217 5 GENE CDK2 NULL cyclin-dependent kinase 2 EMBV3_35937 TCAGAGCCAGTGGCAGCCCCAGCTGCAGCAGCTAAGGGACATGGGCATCCAGGACGATGA Gene GeneID:511289|UBL7:NM_001015573:58_cdna Constitutive 0 NULL GeneID:511289 21 GENE UBL7 MGC137122 ubiquitin-like 7 (bone marrow stromal cell-derived) EMBV3_07784 GGGGCCAAACCATTCCTGAGAATATGTAATGCTCACTACCTCTGAGTCTCTCTTCCTGGG Gene BVV0102_121682 - 1 EMBV3_40019 GK000012.2:51245843-51361347 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42164 GCCAAGGGCTTTGCAGCGAGAAGCAGGGAAATAAGGATCTGTCTGTTTAGTGGATACCGT Gene GeneID:616742|EFNA5:NM_001076432:11_cdna Constitutive 0 NULL GeneID:616742 7 GENE EFNA5 NULL ephrin-A5 EMBV3_41972 GCCGTGCACTGTCCCGAGCAAAGTCAAGACGTAATTTAGATTTCCAGGATGTCCTCGACA Gene GeneID:525106|C5H22orf28:NM_001015631:34_cdna UTR3_Alt 2 NULL GeneID:525106 5 GENE C5H22orf28 C22orf28 HSPC117 MGC128918 chromosome 22 open reading frame 28 ortholog EMBV3_01076 ACAAGTTTGTCATCTTCCTGGATGTGAAGCACTTCTCTCCCGAGGACCTGACGGTGAAGG Gene GeneID:281718|CRYAA:NM_174289:2_cdna Constitutive 0 NULL GeneID:281718 1 GENE CRYAA NULL crystallin, alpha A EMBV3_22537 AGTGACAGCAAGATCACGGACAGGACTCGCGGATTTTCTTGGAAGAGTTGCTCCAGCGAT Gene GeneID:515718|LOC515718:XR_082704:300_cdna Constitutive 0 NULL GeneID:515718 11 GENE LOC515718 NULL vav 2 protein EMBV3_24551 AAGGAGAAAATGTGGGGACTAAGCCTCTCCCAGGGGTCTAGGAGTCAGATGCTGAAGAGA Gene GeneID:407145|ART1:XM_002693429:50_cdna Constitutive 0 NULL GeneID:407145 15 GENE ART1 NULL ADP-ribosyltransferase 1 EMBV3_28180 ATGATCTCATCACAGAATACAATAAGGAACATGGGGCACAGCTACAGCCCCTGAGAGCCG Gene GeneID:534247|HLCS:XM_002685154:128_cdna UTR3_Alt 2 NULL GeneID:534247 1 GENE HLCS NULL holocarboxylase synthetase (biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)) ligase) EMBV3_28035 TGGCTGCACTGTGTCTTAGTTGGAGCACATAGGAAGTTTTGTTGCTGTATGCAGGCTCAG Gene BVT0102_367893 + 1 EMBV3_14064 GK000015.2:17100713-17190069 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31473 TTGGAACCTACCTGATGGGAAAGTACTCGTGTGGTCATAGGGCTGCTGTTCTGTCGATGT Gene GeneID:540792|UBN2:XM_002687064:202_cdna Constitutive 0 NULL GeneID:540792 4 GENE UBN2 NULL ubinuclein 2 EMBV3_40997 TGTGCAAAAAGGTTTCAGGTGGAGCAGATTGGAGAGAATAAATACCGGTTCGGGGACTCC Gene GeneID:506730|MACF1:NM_001143860:86_cdna UTR3_Alt 2 NULL GeneID:506730 3 GENE MACF1 ACF7 microtubule-actin crosslinking factor 1 EMBV3_04714 CACCTGGGACCCTGAAGGGGACACCTAAATATCAGTTCGCACCCTCCACCACTTTTAGTT Gene BVV0101_004409 + 0 NULL GK000013.2:60997983-61049592 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29267 GAAACATGAATGTCAGTATTGCAACAGATGGTGTGACTGGGAAAGAAGCCTGGTGCGGGC Gene GeneID:518043|DIP2A:XM_002685146:106_cdna Constitutive 0 NULL GeneID:518043 1 GENE DIP2A NULL DIP2 disco-interacting protein 2 homolog A (Drosophila) EMBV3_29434 GCCGTGGCCAACGCGCAGGAGCTGCTACAGAAGTGCATCGCCATGTGCATGGACCGCTAC Variant GeneID:516325|TIMM13:NM_001080277:57_cdna 140^208 1 EMBV3_13080 GeneID:516325 7 GENE TIMM13 MGC155191 translocase of inner mitochondrial membrane 13 homolog (yeast) EMBV3_08254 TATGGTAACGTGCAGTCCGACCTCCTCCACAAGTACCAGAGCAAGAACGACATCCTTATC Gene GeneID:527491|SLC38A1:XM_002687321:132_cdna Constitutive 0 NULL GeneID:527491 5 GENE SLC38A1 NULL solute carrier family 38, member 1 EMBV3_10781 TTCAGGAGCTCAGTCTGGCACATAACCGACTGCGTGTGGGTGGCATTGGGCCTGGCACCT Gene GeneID:534549|PODNL1:XM_002688752:108_cdna Constitutive 0 NULL GeneID:534549 7 GENE PODNL1 NULL podocan-like 1 EMBV3_35761 TATGATGCCTACATTACCTTCCCCTTGCGGCAGCAGAGACATACAGCAGCCCCTACTGAT Gene GeneID:399683|PLP2:NM_203363:36_cdna Constitutive 1 NULL GeneID:399683 X GENE PLP2 NULL proteolipid protein 2 (colonic epithelium-enriched) EMBV3_30802 TCAGTACCCTGCAGCCCTTCCTGCAGTCTGGAAGCTGCACCAGGCCCTCCAGCCCAAGAA Gene GeneID:618896|ADM2:XM_002688004:147_cdna Constitutive 0 NULL GeneID:618896 5 GENE ADM2 NULL adrenomedullin 2 EMBV3_33406 CTTCCTCATCATTCGATACTTCTTTGAGCTGCAGATGTGGAGCTTCTGTCACGGCAGAGC Variant GeneID:539223|LASS2:NM_001034667:136_cdna 234^351 2 EMBV3_32654 GeneID:539223 3 GENE LASS2 MGC126981 LAG1 homolog, ceramide synthase 2 EMBV3_03050 TAGGCAGGTGTCTGCAGTGGAGGTGCTGGCATCTTAGAGGTGGGGAAGACAATTTCAGAT Gene GeneID:280729|B2M:NM_173893:73_cdna Constitutive 0 NULL GeneID:280729 10 GENE B2M NULL beta-2-microglobulin EMBV3_28161 CTCCTTCTGTTAGTGTTGAGACAGCACCTTTACTTACGGCTACTTCAGCCCAACATGCTG Gene BVV0102_420555 - 1 EMBV3_12472 GK000001.2:93633361-93789330 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03161 TCTAGCCTCTCCGAATGGAAGTTGTGACTATTTACAATGAATACAGCTTGTTTGCCAACC Gene GeneID:100295610|LOC100295610:XM_002684796:153_cdna Constitutive 2 NULL GeneID:100295610 1 GENE LOC100295610 NULL similar to mucin 13, cell surface associated EMBV3_36700 GAAGATCAGCAATATCAGTGGCTGGAAAAGTTCTGAGTTACTGTCAAGTATGGAGAATCC Variant GeneID:614817|PSMG1:NM_001076347:39_cdna 486^684 3 EMBV3_36042 GeneID:614817 1 GENE PSMG1 MGC140766 proteasome (prosome, macropain) assembly chaperone 1 EMBV3_16120 ACGATGTCAAGGCCGTGTGCTCCCAGAAAAACATCACCTGCAAGAATGGGCATCCCAACT Gene GeneID:280720|BRB:NM_173891:10_cdna Constitutive 0 NULL GeneID:280720 10 GENE BRB BRN MGC140149 brain ribonuclease EMBV3_33651 GGCATGCTGCGTCCCAAGGCTTTGACCCAGGCTGCTGAATAACGAAGGATCTCTGTTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13972 AGGGTTCTGTTGCTAACCATTTTGTGCTGATACTCAAGAGCCCTTTGGATCTACCTTGGG Gene GeneID:526702|ACRC:XM_002700039:150_cdna Constitutive 0 NULL GeneID:526702 X GENE ACRC NULL acidic repeat containing EMBV3_22952 TGGAAGAAGCAGGGCTTGCACCACTAGAAACCTCAAGGAAAACCCCAGATTCCAGACCTT Gene GeneID:614342|CDC16:XM_002692002:119_cdna Constitutive 0 NULL GeneID:614342 12 GENE CDC16 NULL cell division cycle 16 homolog (S. cerevisiae) EMBV3_27779 GAAGTCTGCTATTGGAGAAGGCATGACCAGAAAGGATCACGCCGATGTGTCTAACCAGCT Gene GeneID:338082|ATP6V1B2:NM_176671:2_cdna UTR3_Alt 2 NULL GeneID:338082 8 GENE ATP6V1B2 NULL ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 EMBV3_24500 GGTAACCTGGCCCACGCAGGAGCCTCAGTAGACCTAACCATTCTCTCTTTACACTTGGCA Gene GeneID:100301020|LOC100301020:XM_002683760:4_cdna Constitutive 0 NULL GeneID:100301020 16 GENE LOC100301020 NULL similar to cytochrome c oxidase subunit I EMBV3_13989 GCCTGGGACTTTGTGGACGTGGTTTCCTGGAATGGGGAAAGAAGAGGGTCTGTGTTTAAT Gene GeneID:282848|PFDN5:NM_174732:9_cdna Constitutive 0 NULL GeneID:282848 5 GENE PFDN5 NULL prefoldin subunit 5 EMBV3_05258 CAGGCAGTTGTGGAGACCGGAGACTGAAAGTTTGCCCAGGCTACCGGTCTAGTTAGAAGA Gene GeneID:100294894|LOC100294894:XM_002685990:332_cdna Constitutive 0 NULL GeneID:100294894 3 GENE LOC100294894 NULL hypothetical protein LOC100294894 EMBV3_43764 GGAAGGGGTCTTCCTTAGACCTTATGGAGGTTGCGTCGCCCTGCTGATGCCTTAATTTTG Gene BVV0102_188746 + 0 NULL GK000015.2:65815273-65824782 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38122 GTTCCTGGAGGAGAAGGACCTGAAGTATGAATGGATTTCCTTGACGTATGCTAGGTTCTG Gene GeneID:615136|LSM5:NM_001046553:60_cdna UTR3_Alt 1 NULL GeneID:615136 4 GENE LSM5 MGC128153 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_29793 GTTTCCCCAGCACCATTTGTTGAAAAGATTGCCCTTTCTCCACTGGATTGTCTTGGCAGC Gene BVV0102_390681 + 0 NULL GK000016.2:67609561-67618108 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16493 TGGCTGGGATCGGTATCTGACCAACCAAAAGGGAGCCAGGAAGTGGGACGGAAAGTGACA Variant GeneID:540599|MEAF6:NM_001024572:280_cdna 233^366 3 EMBV3_27735 GeneID:540599 3 GENE MEAF6 C1orf149 C3H1orf149 FLJ11730 MYST/Esa1-associated factor 6 EMBV3_28087 CAAGGACCCAGACCTAGGGTAGGAGACAGAACCTTCTGGTGAAAGGCTCTGCCCAGCTCT Gene BVV0102_060375 + 1 EMBV3_42916 GK000005.2:30548410-30641008 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26638 GCTAGACCTATACACTGGCAAATCGGTCATACAGCTTTTCTTGTCAAGTTGAGGAAGTGC Gene GeneID:535837|TRMT61B:XM_002691495:422_cdna Constitutive 1 NULL GeneID:535837 11 GENE TRMT61B NULL tRNA methyltransferase 61 homolog B (S. cerevisiae) EMBV3_10456 CTGAGTGCCCTCATCGGGGTCTTGGTGACCTTCGTCCTGCTGTTCCTCGTCCTCCTCTTT Gene GeneID:100336711|LOC100336711:XM_002695425:91_cdna Constitutive 0 NULL GeneID:100336711 18 GENE LOC100336711 NULL leukocyte immunoglobulin-like receptor, subfamily B, member 5-like EMBV3_34060 ACTCGATCAGCACCCTTTTCCTGTGTGGTGGCCTCAGCAAGAATCCCCTTTTTGTGCAAA Gene GeneID:534011|FGGY:XM_002686392:236_cdna Constitutive 1 NULL GeneID:534011 3 GENE FGGY NULL FGGY carbohydrate kinase domain containing EMBV3_30864 TCGTGAAGGGCGTTTCCACCTTTGTCACAGTCGCAGGCTCAGTGGCCAGCTACTGGGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19877 ACAGTGTCATAGCTTGTCTACTTGTCATCTGATGAGACCGGCATTAAACGCTCGCCCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01239 GACGAGGCAAAGCTCTCAGTCTTCTCTGCTGTGGATGCTCCGGTGGCACCTTCAGATAAA Gene GeneID:513230|PITRM1:XM_002692191:83_cdna Constitutive 0 NULL GeneID:513230 13 GENE PITRM1 NULL pitrilysin metallopeptidase 1 EMBV3_02021 GGTGAGGTCTTAGAGGAAATCGTCACCAAGGAGCGACACAGAGAGATCAATAAGCAAGCC Gene GeneID:526095|ARL6IP4:XM_002694477:317_cdna Constitutive 0 NULL GeneID:526095 17 GENE ARL6IP4 NULL ADP-ribosylation-like factor 6 interacting protein 4 EMBV3_01710 CTGGTCCTGGGTTGGAGGCTTATTCATTGGACTGCTGGTGACATCTGCCATTTTCCACCT Gene GeneID:532441|LOC532441:XM_002688593:325_cdna Constitutive 0 NULL GeneID:532441 7 GENE LOC532441 NULL similar to LOC508140 EMBV3_22567 GTCAGAAATGGGAGTTGTTGCTGGAATTTCTTTTGGAGTCGCTTGCTTCCAACTGATTGG Gene GeneID:514741|TSPAN6:NM_001038109:5_cdna Constitutive 0 NULL GeneID:514741 X GENE TSPAN6 MGC133784 tetraspanin 6 EMBV3_34353 CTCAGCTGGAGGAGGCGAGCTCCACAGGCGACAGCGTGGAAGATGAACTGGAAATGGCCA Variant GeneID:614299|KCNIP4:NM_001076935:198_cdna 132^233 1 EMBV3_06772 GeneID:614299 6 GENE KCNIP4 NULL Kv channel interacting protein 4 EMBV3_29052 GAATGGTTGTGTTCCCAGTTAGGTGATAGTTCCTTGCTGACGCTGCTTTGCCTGTGTAAG Gene BVV0102_021692 + 0 NULL GK000011.2:9694987-9722024 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029923 TCONS_00026847 TCONS_00023976 TCONS_00026846 TCONS_00026845 3 XLOC_016178 XLOC_015126 XLOC_014405 Coding TCONS_00023976 XLOC_014405 NonCoding NonCoding HK2 11:9720949-9722165 x TSS17710 760 2 0.376131687242798 7.38799560334487e-05 0.000125271391000686 0.000172444786214071 0.000153820061670288 0.000698340707632043 4.48669580516986e-81 0.000134935071239894 0.000871242458584731 0.00121638042283555 0.000589659606000719 0.000247014176688218 0.000758613655404359 0.00012704686825243 5.37177136517863e-39 9.01419950352885e-27 0.00947003356384838 0.01496290499102 0.0137559803297304 9.96131800723185e-27 9.55520639893329e-05 2.00794097401633e-66 0.00863967710649721 0.00418201978404384 0.0119703904315937 0.000102474059064119 1.40948173327755e-05 0.00010020041043782 0.00150600024168867 0.00149104586058228 0.00474368076471697 XM_002691189.2 HK2 PREDICTED: Bos taurus hexokinase 2 (HK2), mRNA. 0.0 1368 100.00 0.996052631578947 XM_005264280.1 HK2 PREDICTED: Homo sapiens hexokinase 2 (HK2), transcript variant X1, 3e-63 246 73.03 0.486842105263158 0 noncoding 1 1 0 0 1.17438434456231 0.0239079907375871 0.263676012905626 0.0277719052146475 AATATTTGAAAAATGTTAAAATTTATTAATAATAGTTAACATCACACAGTTAATCCAACTAGTTCTTTATTGTACATGACAACATCTTCACTAGACTGAGCGCTCAAGGGTTTGAGATGATCTGCTACTGAGTACATCGCAGTCATAGATTGAGTCAATATACTTACACAGGCAAAGCAGCGTCAGCAAGGAACTATCACCTAACTGGGAACACAACCATTCAAAACACATTTTCCACCGTTCCGTTTTAGAAGCCACACACACAGCTCTACCTTTTAAAAATGTGCAATTTCATAGATGGTGCCTAATCTTTCAAGTTTAAAAGTTAAAGTTCACTTCTATTTCTTGGGCATCCCTTAGTGATACACAAATCTAGACACTGTTCTCACTACAAGTTTGATAAATGTGCAAAATTTGGGTGCTTTGAGTTGTGTCGTTCCATTTTTGTTTTGATCCTTGTATCCTACTCAACATTGTTAAAAGGCCTTCCCCTCTTTATTATGAAGTATATGGGTTAAATAAAAATATTAAAATGATTTAATATTTTAGGGCAGAAGTGGGCTCTCAGATTCAGGATTAACTGCACTATAAAAAGTAGGGTAAGGAAGGTTTTAGGTCCCTTTCCCTCTCTACCCAAGCAGTTTGAAATAAATACTTCTTGTAAAAACAGCTTAGCCCTAGAAGTCTGTGGACAATACCTCTTATAGAACATTTACAAAACAAACCCAAGGTGAAATTTGCTAGAAGGGTACAAATCCAC TCONS_00026847 TCONS_00026848 r 5' 0 TCONS_00026847 TCONS_00026848 r 5' 0 EMBV3_04534 TTAGAAAAGGCACATGGGGTCCTCTGCACATCTCTCCTGGGGTTGGGGATTTCAGTTTTG Gene GeneID:515653|SGSM1:XM_002694613:141_cdna Constitutive 0 NULL GeneID:515653 17 GENE SGSM1 NULL small G protein signaling modulator 1 EMBV3_05058 GGCTCTGTCAAGTCGTGAACCGAAACAGAAAGGTGATGGATAACGTGGTGAATGTCGACT Gene GeneID:510774|ABHD1:NM_001035094:102_cdna Constitutive 2 NULL GeneID:510774 11 GENE ABHD1 MGC127615 abhydrolase domain containing 1 EMBV3_04481 CAGCTTTTATTCCAAGGCTGTAAATGTAGGAGGGGGAAGCAGGAGGCCCAGAGAGGGTTA Gene BVT0102_100815 + 0 NULL GK000022.2:12515212-12520392 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127994 1 XLOC_077796 Coding TCONS_00127994 XLOC_077796 Coding Coding CSRNP1 22:12519108-12532851 = TSS95614 3411 1 TCONS_00127994_4 588 5 0.752146703536603 0.00103308454484937 5.91709747660943e-05 0.000605191753905466 0.000474730867959432 3.62470971326722e-05 8.1797463314117e-05 0.000102791230519659 7.78631183316966e-05 5.08890116636426e-05 2.42315446900466e-05 3.82538184336829e-05 1.30701050603752e-05 1.46775310504742e-05 0.000489567744456193 0.000869241142831134 0.00226095843536477 0.000999007559343428 0.000739487168750476 0.000235447673822057 0.000862295567488839 0.00111336936988333 0.000269238258928483 0.000897312990188821 0.000707740607104846 0.000822642231739771 0.000694011768408024 0.000278269999624609 0.000684274148422511 8.91368983620408e-05 0.000460039724355171 XM_005222459.1 CSRNP1 PREDICTED: Bos taurus cysteine-serine-rich nuclear protein 1 (CSRNP1), transcript variant X2, mRNA. 0.0 5404 100.00 0.878041630020522 NM_033027.3 CSRNP1 Homo sapiens cysteine-serine-rich nuclear protein 1 (CSRNP1), mRNA. 0.0 2709 78.88 0.928466725300498 TCONS_00127994_4 sp|Q96S65|CSRN1_HUMAN CSRN1_HUMAN Cysteine/serine-rich nuclear protein 1; 0.0 861 82.77 0.998299319727891 0 coding 0 0 0 0 -0.0811299609421615 0.476481375934189 -0.0421404338559339 0.47814043634163 CTCCCGCCGCCGCCGCCGCTGCCGGACGCGCAGAGCGAGGGGCAGCTGGGCCGAGTGCTGCCCTCCGAGGGAGCTAGCGAGAGAGCGAGCGAGCGCGGGGTCGCGGCGCAGGGGGCGTTCCCGACCGGGACGTGGGTCGCGGCGTTGCCCTTGCCCAGCGTCCGGACCTCAGGCTGGCTGTGCCCAGGCCCCAGAGCACCCTCGCCACCATGACCGGGCTGCTGAAGCGGAAGTTTGACCAGCTGGATGAGGACTCGTCCTCGCTCTGCTCGTCCTCCTCCTTGTCCTCCTCGGGCCACCACTCCCCTTCCTGCTCCCCCAGCTCCTCGGTTTCCCCGGCCTGGGACTCGGATGAGGAGAGCCCTTGGGATCAGCTGCCCTTGCCTGACGGTGACTTCTGTGGCCCCCGAAGTTTCACTCCCCTGTCCATTCTGAAGCGGGCTCCCCGGAAGCGCCGAGGCCGAGTAGCCTTTGATGGCATCACCGTCTTCTACTTCCCGCGGTGCCAGGGCTTCACCAGCGTGCCCAGCCGTGGCGGCTGCACCCTGGGAATGGCCTCCCGCCACAGTGCCTGCCGCCGCTTCTCCCTGGCTGAGTTTACCCAGGAGCAAGCCCGGGCACGGCAAGAGAAGCTGCGCCTACGCTTGAAGGAGGAGAAGCTGGAGGCGCTGAGATGGAAGCTTTCGGAGACTGGGGTGCCCAAGACGGAGGCCGGCCTGCCGCTCACTGTGGACGCCATCGATGACGCCTCTGTGGAGGAGGACTTGGCGCTGGCCGTGGCAGGCGGCCGGCTGGAGGAAATGACCTTCCTCCAGCCCTTCCCGGCCCGGAAGCGACGGGCTCTGCTGCGGGCCTCTGGTGTGCGGAGGATCGACCGAGAGGAGAAGCGAGAGCTGCAGGCCCTGCGCCAGTCCCGGGAGGACTGTGGCTGTCGCTGCGACAGAGTCTGTGATCCCGAGACCTGCAGCTGCAGCCTGGCGGGCATCAAGTGCCAGATGGATCACACAGCGTTCCCCTGTGGTTGCTGCAGGGAGGGCTGTGAGAATCCGAAGGGCCGTGTGGAATTTAATCAGGCTCGAGTTCAGACCCATTTCATTCACACACTCACCCGCCTGCAGCTGGAGCAGGGGGCCGAGAGCCTTGGGGAGCTGGAGGCCCCAGCCCAGGGTGGCACTCCCAGCCCCGGCGAGCAGGTCTTGGCCTCTGCGTTCCCCCTAGCCAAGCCCCCTGTGAGCAGCGAACTGGGAGACAACAGCTGCAGCAGCGACATGACCGATTCGTCCACAGCCTCAGGCACCAGCGAGGCCCTGGATGGCCCTGCCCGCCTGGCCCTGCCCGGCCCTGGCTTCCAGCCTGGCGTGGATGATGATGGCCTGGCTCGTATCCTGAGCTTCAGTGACTCTGAACTAGGTGGACACGAGGAAGAGGAGGAGGATGGGGGTGTGGGCGGCCTGGACAATCTCAGCTGCTTCCACCCAGCTGACATCTTTGGTACTGGTGACCTCACTGGCCTGGCCAGCTGGACCCACAGCTATTCCAGTTCCAGCCTCACGTCAGGCATCCTGGATGAAAATGCCAACCTGGATGCCAGCTGCTTCCTCAATAGCGGCCTTGAAGGCTTGGGCGAGGGCAGCTTCCCTGGCCCCTTGGTGCCAGCCAGCACGGACGCCGGCCAGAGCAGCTCAGTGGACCTCAGCTTGTCCTCCTGCGACTCCTTCGAGCTGCTCCAGGCCCTGCCAGACTACAGTCTGGGGCCCCACTACACCTCCCGGAAGGTGTCTGATAGCCTGGACCACCTCGAGGTGCCCCACTTCACCTTGCCTGCCTTCTCTCCCCCTGCGGATACCAGCACTTGCTTCCTGGAGTCCATCATGGGCTTGACTGAGCCCGCTGCCGAGGCCCTGGCTCCCTTTGTGGATGGCCAGTTGTTTGAGGACACCACCCCGGCGTCGCTGGTGGAACCTGTGCCTGTGTGAGGGTTAGGGTGCCTTTTCCTGGCCCCAAGAACCCTGTTGCTGCTTTGTTGTAATTTGGGGGCTCCCCAAGGTCTGTATGTAATGGTCCCCCGTTGGCTGGCTCCCATGTGGGCACTCCTACTAATTTTCATGCAACACTCTGGATTGATTTATTTATTTTTGTAACTTTCTATGCTGAAGTGGGGAGAGGGGGGCGCTTCCCCTTTCCGTTGCCCGGCCCCCCTATGCCCACACCTTCTCTTCTACATCCATGGCACATGCCAGGAGTGAGAAGAAGTGTGGCTTCCCTGGAGCTTTGCAGACTCCTTGTCCATCTTGTATGATGTTCCTAAGCCCGAAGACAGCCACCTGAGGCTGACATCAGCCACCTCTTACGGTTTCTTCTGCCACCCTGAGCCCTAGACTCATGGGTGACTGGATCCTCTGGACTGTGAAGACTATAATTTATTTCCCATAATTTATTTGGAGACTAGGTGGCTGGCGAGCAATGCTGGTGTCGGGGGTGGGGCACAGGACCCTCTCCGCCACCCGCAAAGTCCCTTTGCCTGATAGTCCTGCAACCCTGCCCTTGCTGGGGCTTCGGTGTAGACCAGGCATGGGTTTCCACCCTCTGTCTAACGTGCAGCAGCCCTGCTCTGGATGGCTGAGCGAGTAGGGGCAGGGGCTGGGCGGGGCCGGGCCGGGCCGGGCTGACCAACCGTGACCAAAACCCTCTTCTGCTCCACACATCCCCTCTCCTTCCTGTCCTCTGCCCATCTCTCCCTCTACCCCCGCAAAGGCCGCAGCTTTTATTCCAAGGCTGTAAATGTAGGAGGGGGAAGCAGGAGGCCCAGAGAGGGTTAAGGGGCTGCCTCAGGGCCCACAGTAGGCCCTGGACCACTCAGGGCTTTCCGGGCACTGCACCCCAGCCTGGTCCACCTGCCCGCACCCTAAGGCCAGTTGGCCAGGGGCGAAGGGGGCTCCTTATGGCTTTCCTGCCCTTTGTTTGCTGATGTTGGATTTTGTATCATAATTTCTGTATTGTCTCTGAGTATTAGAACTATAATTTATTCATTTTTCCTCTGTGTCTGTGCCAAGAAGCCCAGGCTCTGGGCCTGCCCTCCTGCCCAGCAGGCCTTGCCAGCCTGCGAGCTTGTGGGAACACCTTGTACCTGAGCTTATAGGTACCAATAAAGAGGCTCTATTTTTAACAGCGTGGTCTGCATTTGTGGAGCTTGGAGCACAGGTACACAGGAGGTGGTGAGGTGGGAGAGGGACGGGGAGACAGGCCCTGCAGGGCAGTATGGACATGGAGGCTGCATCGGGGATAGATATGGGGGACACAGGCCCTCTTTCCAGGCCAGCCAGTCAACTCAGAGATGGAAAGCCAGCTAGAAGAGGCTGGCCAGGCAGATGAACCCGTCTGAGGGGTCACCTGGGTGGTGGTGGGGAGCAG EMBV3_20212 TCTGTTTCAGGGAGACTGTCCCTTTCTGGATTGTAATTTCCTGAGTGTTATTAGTATATC Gene GeneID:615646|TMEM38B:NM_001076387:30_cdna Constitutive 0 NULL GeneID:615646 8 GENE TMEM38B NULL transmembrane protein 38B EMBV3_02045 ACCAGTTGTTCCTGCTCTGCTTCTCCGCAGGTGGTGACCTTCGATGAGGGGGGCGTGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42044 AAGGCAGATGGTTCCTGGGATCTGAATGAAGGTCTGGCTTTGGTCCTGGGTATGAAGTTG Gene GeneID:521780|VWA5A:XM_002699100:105_cdna Constitutive 0 NULL GeneID:521780 29 GENE VWA5A LOH11CR2A von Willebrand factor A domain containing 5A EMBV3_06246 ACTACCCAGAGTCGGCTTCTTTTGACCTCCGCTACTACCCTTACTATGGCAAACTGACTC Gene GeneID:510026|ATP1B4:NM_001101919:7_cdna UTR3_Alt 2 NULL GeneID:510026 X GENE ATP1B4 MGC166431 ATPase, (Na+)/K+ transporting, beta 4 polypeptide EMBV3_34223 ATATTGCCACAAAAAGTTCCGTCGCCAAGCCTATCTGCGCAAGCACCTGGGCACTCACGA Gene GeneID:614156|INSM2:NM_001144080:53_cdna Constitutive 0 NULL GeneID:614156 21 GENE INSM2 NULL insulinoma-associated 2 EMBV3_29885 GATTTTGCCGGTGGCTGTTCTAACCTCCGCTTTGGAGGAGCGGGGAACCCAAGCTGAATT Gene BVT0102_162620 + 1 EMBV3_31741 GK000013.2:64069301-64213311 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30713 TCACAAGTCAGCTTCTCGATCAAGGGGCCTCACAGTGTTACGATGTATTATCCTCCGACG Gene GeneID:538800|GNPAT:NM_001103286:102_cdna Constitutive 0 NULL GeneID:538800 28 GENE GNPAT MGC140233 glyceronephosphate O-acyltransferase EMBV3_09040 GTGGTGCTGGCCGTGTTTCTCAACGAGCAGGTGGAATTCTCAAGACTTCCAAGGAAGCAG Variant GeneID:509535|NUDT18:XM_002689766:30_cdna 282^495 1 EMBV3_07007 GeneID:509535 8 GENE NUDT18 NULL nudix (nucleoside diphosphate linked moiety X)-type motif 18 EMBV3_03677 CAAGGTGGTGGAGTGCTTGGACCATGCCAGTTCTACATGAGAACCAACTGACCCACACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28371 AGATGCTTATAGGAGATGTTTCCACTCTCAAGGAATGCCACAGATGGTGGAGGAAGTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28285 AGAAGAAGCTGCCGCTTTTCCTGAAGTTACTTTGCATTTCCTTTGAAAATTATCGAAAAG Variant GeneID:522917|RIOK3:NM_001075836:25_cdna 323^468 5 EMBV3_34292 GeneID:522917 24 GENE RIOK3 MGC138071 RIO kinase 3 (yeast) EMBV3_38942 CATTGGAAGGTGGATTCTTAACCACTGGACCGTCACGGAACCCCAGACGGACAATTCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02414 AGGCGAGAAGAAGGATTTGTTGCTGCCTTGGGGGATGGGAAGGAGCCTGAAGGAATTTTT Gene GeneID:506358|MRPL20:NM_001038506:61_cdna Constitutive 0 NULL GeneID:506358 16 GENE MRPL20 MGC133597 mitochondrial ribosomal protein L20 EMBV3_41562 CTTAATATCGTTTTTGTCATCGTATCTATGGTGGGGGCGGACTTTGCACTTAAGCAGTGC Gene GeneID:515320|HBP1:NM_001046196:51_cdna Constitutive 0 NULL GeneID:515320 4 GENE HBP1 MGC128984 HMG-box transcription factor 1 EMBV3_26519 ACCTTGAAGCCCACTTGTTCCATGGCGTTTTCATCACCTTCCTGCCTTAGCCAATTTGAC Gene BVV0102_121188 - 0 NULL GK000013.2:45553521-46139653 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32746 CCCTTCCCCCGCACTTCATATCTGGCACAAAGACTTCACATTTTCTCTGCATAAGTGTGC Gene GeneID:504318|GAS8:NM_001097569:102_cdna Constitutive 0 NULL GeneID:504318 18 GENE GAS8 MGC148363 growth arrest-specific 8 EMBV3_25925 CAACATGAATTACTGGCTCATAATCCGGCTGCCCATCCTCTTCGCCATCGGGGTGAACTT Gene GeneID:517420|GLP1R:XM_002697227:38_cdna Constitutive 0 NULL GeneID:517420 23 GENE GLP1R NULL glucagon-like peptide 1 receptor EMBV3_31647 GACCAACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGACGTTGTGGAGAA Gene GeneID:505542|MSI2:XM_002695588:129_cdna Constitutive 0 NULL GeneID:505542 19 GENE MSI2 NULL musashi homolog 2 (Drosophila) EMBV3_21648 AAAATGCAGAGCCATTGATCAATTTGGATGGCAATTCGCATTTTGGTCCAGGAGCGCCTG Variant GeneID:513083|C10H14ORF166:NM_001035280:52_cdna 445^533 2 EMBV3_27653 GeneID:513083 10 GENE C10H14ORF166 MGC127223 chromosome 14 open reading frame 166 ortholog EMBV3_09654 CCCCTAGCCTCCGCACCCCTCTTCCTGTGTCAACTGGAACAAGTCAAATACAAAACAGAA Gene GeneID:505436|CLIC3:NM_001100301:20_cdna Constitutive 0 NULL GeneID:505436 11 GENE CLIC3 NULL chloride intracellular channel 3 EMBV3_32185 CAGAAGCCGGGAACCTGATCCCGGAAGGACCAGCACGCACACCAGCAACGTGAGAGTCCA Gene GeneID:100299905|LOC100299905:XM_002688473:50_cdna Constitutive 0 NULL GeneID:100299905 6 GENE LOC100299905 NULL hypothetical protein LOC100299905 EMBV3_33155 GCCATGACTGTAGTATTAGAAGTCGTTGACGAATCGTTGTAAGCCGTATTCTTAGGCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36336 CATTTGAGATGCTTGTCCTGGAACCACGTGCCTCTGATGATGAAACCCTTGAGTCTGAGG Gene GeneID:515330|MYO9A:XM_002690529:559_cdna UTR3_Alt 2 NULL GeneID:515330 10 GENE MYO9A NULL myosin IXA EMBV3_23879 ACAGCCGAATCGCGGGAATTTGGCGCCTATTTTTTGTTGGTTGGGTGTTCTCGTCTGTGA Gene BVV0102_072678 + 0 NULL GK000013.2:53494821-53605291 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045515 TCONS_00045518 TCONS_00045512 TCONS_00045517 1 XLOC_026452 Coding TCONS_00045515 XLOC_026452 Coding Coding STK35 13:53481958-53496041 j TSS33193 2136 2 TCONS_00045515_4 257 4 0.848601050987076 0.00196256186745441 0.0022448969592354 0.00209319868783088 0.000892801826730823 0.0014378889261705 0.00102510895157966 0.000705631042349383 0.000958141688614304 0.00276201718362515 3.00616592758099e-05 1.55727731164581e-06 0.000100363362889285 2.49715078925602e-10 6.08126107270848e-17 4.93451155466213e-05 2.53716513335709e-10 3.08336705045527e-05 4.97502938072113e-13 0.00265237227203852 0.00295609807733404 0.00361223608835193 1.70114547647376e-12 3.11463690489582e-10 5.99391486199156e-19 0.00782341890483827 0.0019885056005185 0.00118138758324518 2.6464117711981e-09 7.5740108619781e-29 3.99925416986262e-05 NM_001113768.1 STK35 Bos taurus serine/threonine kinase 35 (STK35), mRNA. 0.0 2459 100.00 0.637640449438202 NM_080836.3 STK35 Homo sapiens serine/threonine kinase 35 (STK35), mRNA. 0.0 1741 95.99 0.50187265917603 TCONS_00045515_4 sp|Q8TDR2|STK35_HUMAN STK35_HUMAN Serine/threonine-protein kinase 35; 0.0 542 99.61 0.996108949416342 2 coding 0 0 1 1 0.0285439334486877 0.836205334904045 0.0897422449360029 0.164301871891043 TTCTCGCAGAGCGGACGAAGAGAGGAGGTTGCGGTGCACAGGCGGCTGCGGAGACCAGAGGCCACAGCCGAATCGCGGGAATTTGGCGCCTATTTTTTGTTGGTTGGGTGTTCTCGTCTGTGATTGGGCCCCCGCCCCGCGTGGGTGCGCCGGGCTGCGGCTGGTCGGCCGACCCTGGCAAGACGCCGGCGGCGCAGCACTCAGCCGGCCTTCCGGGGGATGGGCCACCAGGAGCCTCCGCTGGCCCGACTGAGGGCCGGACGTGCGGCTTATATAAAAAGGTTACGTAAAGGGCTCAGCTGGCGCGAACACGTGGAGAGCCGCGGGAGCCCGGACGCCCAGCTGTCCCCCGAGAGCACTGCTGCCGTGACTCGTGCAGTAGCAGGCGCCGTCGCACGCCCGACTCGGGCCGCGGCCTCCCGCGCGGCTCCGTACCCGAGGCAGCCCTGTCCAGGGGCGGATCATCCCCAGCCGGGGGCCTTAGGAGGGAAACGCGCTGCCCGGAAGTGGAAGGGCGCCGGCCAGGTCACAATCCAAGGTCCCGCTCTTCCGCGTCCCGGGGCCGGACGGAGGGATGAGGCAGGGGGGTCCCGGGCAGCGCCGTTGCTGCTCCCCCCGCCGCCCGCAGCCATGGAAACGGGGGAGGAGGACGGCGCTCGCAGAGGTACACAAAGCCCCGAGCGGAAAAGGCGAAGCCCAGTGCCGCGGGCGCTCAGCGCGAAGCTGAGGGCGGCGGCGGGTCGGCGCGGCCGCGCTACAGCCTGTTGGCGGAGATCGGGCGCGGCAGCTACGGCGTGGTGTACGAGGCAGTGGCCGGGCGCAGCGGGGCCCGGGTGGCGGTCAAGAAGATCCGCTGCGACGCCCCCGAGAACGTGGAGCTGGCGCTGGCCGAATTCTGGGCCCTGACCAGCCTCAAGCGGCGCCACCAGAATGTCGTGCAGTTTGAAGAGTGCGTCCTGCAGCGCAACGGGCTCGCCCAGCGCATGAGCCACGGCAACAAGAGCTCGCAGCTTTACCTGCGCCTGGTGGAGACCTCGCTCAAAGGAGAAAGGATCCTGGGTTATGCTGAGGAACCCTGCTATCTCTGGTTTGTCATGGAGTTCTGTGAAGGTGGAGACCTGAATCAGTATGTCCTGTCCCGGAGGCCGGACCCAGCCACCAACAAGAGCTTCATGCTGCAGCTCACAAGCGCCATTGCCTTCCTGCACAAAAACCACATCGTGCACAGGGACCTAAAGCCAGACAACATCCTCATCACAGAGCGGTCTGGCACCCCCATCCTCAAGGTGGCAGACTTTGGACTAAGCAAGGTCTGTGCTGGTCTGGCCCCCCGAGGTAAAGAGGGCAATCCAGACAACAAAAATGTGAATGTGAATAAGTACTGGCTGTCCTCAGCCTGTGGCTCAGACTTCTACATGGCCCCTGAAGTCTGGGAGGGACACTACACAGCCAAGGCTGACATCTTTGCCCTGGGCATTATCATCTGGGCAATGATAGAAAGAATCACTTTCATTGACTCTGAGACCAAGAAGGAGCTCCTGGGGACCTATATCAAACAGGGGACTGAGATCGTCCCTGTTGGTGAGGCGCTGCTAGAAAACCCAAAGATGGAGTTGCACATCCCCCAGAAACGCAGGACTTCCATGTCTGAGGGGATCAAGCAGCTCTTGAAAGATATGTTAGCTGCTAACCCACAGGACCGGCCTGATGCCTTTGAACTTGAAACCAGAATGGACCAGGTCACATGTGCTGCTTAAAATTCAGGGCAAAGCATCTTGGGTGTTTTTCAACTAGGTGAGTGTACCTCTGTTTGCTCTGCATGTGCACTTCCTGGACTGCTGGATTCCTCAGACTTGGCCCTGAGGGATGGGAGGAGAGATGGGGAATGGAGTTGGGGGGAAATGCAGGGTGGAAGAGAAATAAAGTGCTCGATACCACAGATTCCTCCCAAGTCTCCATGAGGAGTCATGGGATTATTTGAGTACAAATTAGAAAGTCTAGAGAAGTTTTGAGTGGACACTGCATTTGAACTGAGTCTCTTAAGATTTTTAGAAACACTTTTTCTCAATAAATGCTTACTGTAGAAAATGTGCAAAAGTACAGACAATTTTTTTCAGAATAAACGCTGTCCCCAGT EMBV3_14157 AGCAGGCTTCCCTGTAACCCATGTTCTGCAACAAGCATGTCAAATGACACTTGTGAGCCA Gene GeneID:538611|KRT40:NM_001105418:180_cdna Constitutive 0 NULL GeneID:538611 19 GENE KRT40 NULL keratin 40 EMBV3_35420 TTAGTTCTGGAGGCTGGAAGTCCAAGAGCGAGGTGTCAGTTGGCAGGTTGGGTTCCTACT Gene BVV0101_065317 - 1 EMBV3_37018 GK000010.2:75637243-75783881 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20705 CCTGGGAAAAGAAAGACACCCAGATCCAGGAAGCTCAAAGTTCTAAATACGATCTAGGAG Gene BVT0102_107159 + 0 NULL GK000002.2:13761788-13825853 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104495 TCONS_00104492 TCONS_00104490 TCONS_00104491 TCONS_00101640 TCONS_00104493 TCONS_00104489 TCONS_00104494 TCONS_00101637 2 XLOC_062393 XLOC_061727 Coding TCONS_00101637 XLOC_061727 Coding Coding - 2:13783251-13825707 - TSS75905 6714 2 TCONS_00101637_3 169 0.473786118558236 3 0.841926745966317 0.00015395147745326 0.00014187925498255 0.000226732696736766 0.000165361656067001 0.000125814639868396 5.84553955909737e-05 2.71232985679727e-39 4.14534012118834e-05 1.0571055783888e-05 0 0 3.07874786932735e-39 0 9.54200684724961e-58 6.19330998295357e-22 6.17319648526353e-88 9.53084042835718e-253 2.35474610136191e-197 0.000283577034453191 0.000215196387709604 0.000167276103528005 8.95913792985414e-70 2.51172769718606e-27 1.31300733077451e-229 0.000269906443440176 0.000403386456424688 0.000103831534855973 4.118068632792e-97 2.87016937888906e-108 4.4724265546787e-48 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1705 90.02 0.184688710157879 NR_073365.1 DNAJC10 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 10 (DNAJC10), transcript variant 3, non-coding RNA. 2e-140 506 68.83 0.21149836163241 TCONS_00101637_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 8e-08 52.0 25.73 0.982248520710059 1 coding 0 0 0 0 0.0167347418554733 0.940529037519414 0.00572598978268642 0.90318750457376 GTTTTTAAGTAGGTCTCGGTGGGATCTGAGCGTTTCTGGCTCCCTCAAGTTCGGTGCTTGTTGATGCCGTCCCAAGGACAACACTTTGAGAACCACAGCCCTCAGGGAGATCCTGCGTATCCTAAGCATTCCATAGGCGCTGGAGCAGGGAGCAGCCAAGAGGAGCAACCCCATGTCCAAGGTCAGGAGTGGCAGCAGGGAGGAAATACCCCACGTCCAAGGTTTGTAAAGTAATGCTCAAAATCCTCCAAGCCAGGCTTCAGCAATACATGAACTGTGAACTTCCAGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAAACAGAGATCAAATTGCCAACATCTGCTGGATCATCGAAAAAGCAAGAGAGTTCCAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGACTGTGTGGATCACAACAAACTCTGGAAAATTCTGAAAGAGATGGGAATCCCAGACCACCTGACCTGCCTCTTGAGGAACCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGAACATGGAACAACAGACTGGTTCCAAATAGGAAGAGTATGTCAAGGCTGTATATTGTCACCTTGCTTATTTAACTTCTATGCAGAGTACATCATGAGAAAAGCTGGGCTGGAAGAAGCACAAGCTGGAATCAAGACTGCTGGGAGAAATATCAATAACCTCAGATATGCAGATGATACCACTTTATGGCAGAAAATGAAGAGGAACTAAAAAGCCTCTTGATGAAAGTGAAAGAGGGGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACTAAGATCATGGCATCTGGGCCCATGACTTCATGGGAAATAGATGGGGAAACAGCGTCAGACTTTTTTTATTTTTTGGGGCTCCAAAATCTCTGCAGATGGTGATTGCAGCCATGAAATTAAAAGACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAACATATTAAAAAGCAGAGACATTACTTTGCTAACAAAGGTCTGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGCATGGATGTGCGAGTTGGACTGTGAAGAAAGGTGAGCGCCGAAGAATTGATGCTTTTGAACTATGGTGTTGGAAGACTCTTGAGACTCCCTTGGACTGCAAGGAGATCCAACCAGAACCAGTCCATCCTAAAGGAGACCAGTCCTGGGTGTTCATTGGAAGGACTGATGCTGAGGCTGAAACTCCAATACTTTGGCCACCTCATGCAAAGAGTTGACTCATTGGAAAAGACCCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGATGACAAAGGATGAGATGGCTGGATGACATCATCGACTTGATGCACATGAGTTTGGGTGAACCCCGGGAGTTGGTGATGGATAGGGAGGCCTGGCGTGCTGTGATTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCAACTGAACTGAAGTTTGAGACTACCTGTGTCCTTAAGGCTGAAATGAGTCTCATCAGTAGCATATAGTTGGGTCTTGTTACAAATTACATTTTTTTATCTGGTATATCCATTAGGAAATTATTCTAGTTCATTATGGTTACTTTTAACCTTTACAACTAGATTTGTAAATGATAAATTCACCAGTGTTAGAGTATTCCAAATTAACTATGTATTTACCTTTACCAGTGAGATTTATATTTTCATGTTTTCCTCTTACTAATCAATGCCATTTTGTGCCTGTTCAGTCATGTCTGACTCTTTGTGACCCCATGGATTATAGCTCACCAGGCTCCTCTGTTCATAGGATTTTCCAAGTGAGAATACTATAGTGGGTTGCCATTTCCTTTTGCAGGGGATCTTCCTGACCCAGGTATCAATCTTGCATCTCTAGCATCAGCAGGCAGATTCTTTCCACTGTGCCACCTAGGAAGCTCTACTGCCATTTTAGTTCGGCTTAAAGAGCTCCTTTAACATTTGTTATGAGGCATATCTAGTGGTGGTGATGTCCTTAGCTTTTGCTTTTCAAGAAAACTCTTCAATTCTGAAGGACAACTTTTGCCAGTTTTTTTTCCTTTCAGCATGTTGAATACACCATGTCACTCCCACATGGCCTGCAAAGTTTCTACTGAAAAATCCATTTATAGTTTTAGTGGGGTTCCTTTGTAGGGAACAATTTTTTTTTTTTTTTCCTCTTGCTGTTTTTAAGATTCTGTCTTTTGCAATTTAATGATAACTTTTCTTAGTATGGGTCTCTTAGATCGTATTTAGAACTTTGAGCTTCCTGGATCTGGGTGTCTTTCTTTTCCCAGGTTAGTAAAGCTTACAACCATTTCTTCAAAATTTTGTCCCCTTCTCCCTTTCCTTTCTGGGACCCCTGTAGTGCAACCTCTGGGTTGCTTGATGGTGTCCTATAAGCTATCTTCACTCTTAATTCTTTTACTTTTGCCACTCTGATTGAATTCCACCATCTGGTCTTTGACTTCACATAACGATTTTTCTTAGTCTACTGTTGATCCCTCTGTTGAATTTTTCAGTTACTGTATTCCTCAGTTGTGTAATTTTTATTTGCTACATTTTCTATTTCCATGCTGACACTCTCACTTTGTTCACGTGTCAGGGAGTACCTTTATGGTAATAGCATTTATTTCATTAAGATCTCTTTCTCAAGTTTTCTCGTGTCCTTTGTTTGGAACCTAGTCCTTCTTTTCTTCATTTTCCTTGACTCTGTGTTGGTTTCTCTGCATTAGGTAAAACAACCTCTCCCAGTTTTAAAGGAGTACTTTTGTGTAGATAACGTTATCGTTTAACCATGCCCTAGCCCTTGGCTCTAATACCTTTGTGATCATTGAAGCAGACTTTTTTTCTCAGTGGCTCTCAGTAGTGGAGGTGTACCAAGACCTGTCAGTGTCCCAAAGGGGAGGGTCTTATTCAGCACTTGGATGCAGGCTGATTGGAAACTGTATTCTCTGGCAGCGGACTGTCGAGTATACAAACAGACCACTTTTATGGGACGATTGGGAGGCGGTCTTTGCTCTCTTTGCACTGAGGCTTGAAGGGACAGCGCATTATGGACTGTTTGCTACAGTCCTACAGGATCCACAAGCACTGCTGCCCCCAGAGCCAGGTGATCAGTCCCATGGGTGGCAACCACAATAGCTGGGGCACCAGATGTTTGCACAAGCTCCTTCCCAGGAAGTTCTGGTGATCTGGTGTGAGGTAGAGGGACAGCACATGCCTGCACCGTCCACGGTCTCTGGAGAGTAACGAAGTGAGCCCTAAGAAGCCTGTTCTTCAGGCTAAAGCATTTAAGATAAGCAAATAGGCCTGTTTTACATTAAGACTGGGCAGCTTCAGAATATTTGCTTTGGGCTAAACCTTGGGGGATTAGCCTCAGTGAGTCCATACAAGCCTGTGAGGAACTGCTTCTCAGATTGCACTAGCTCGCGGGTCTGAGAGAAACCCTTGCTGGCTTTCAAAGCTACATTGTTTTAGGGGCCCATCTCTCCAAGTCTTAAAAGCTGCAGCACCAGCTGTGGGGTCCAAACCTTTTGATCCTTAGGAGAAACTTGTAGTCCTGAGATCCCCCTGGTTGGGTCACTGTGTCAGGTGGGATTTATGGTGAGACCATGTCTTCAGCCTCTCCTACCCATTCCAATGTGGGCTTTTGCTCATCCACCTGATGTGTAAAAAGTTACTCAGCTAGACTCTGGATTTCTTTCAGAGAGAACTGTTCTGTATGTAACTGCTATTTAATTTGTCCATGGGAGGAGGTGAATTTGGGAGTCATCTTGTACTGCAACCTGCTGATTTTTAAAAAAAAAAATCCTTTACCTCCTCAAAATGTTTGGAATAGCAGTTATTTAATGAATTGTTCATCAGTAGTTAAATAACATATAATAATATTTTTGGTGAACATTAGCACAGACTCTTAACAGGACTTGTTGGCCCAGAGGGTGGACTGATGAAGAGCATGTTTCTGGGTTTTCCTCTTTCCTACTGTGTCTGGTCATGATGACTAATCCTTGGGTGCTGTTAAATGTGCAGTTGTCTCAGGAGTCCTTGATGGAACAAGTTTCTCGACATACCAGGATCCTTCTGTTGGACTTATTTTTTCTACTGAGCTATTTTACTCATCCACTTTTGAATCTTAGGTAAATTAATTTAGAGCAGAACAGATTGTTTCAAATATGATTACGAATTTTCAGAGCAGACTGCTAAATCATCCACTCGTGACAAGATAATGCAACCAAATGATCAAGACACCACATTTTGGGATTTATTATTGATATGGCCCTGTTTGACATCAGCTTCCATCCATTATTCTGGTGAGTTACTGCTCACAAGATATACCCATCAAGGAGACTGGATGATAGTAGAGCTGTCCCTTGAATAATGTGGGGGTGAGGGGTGCCAAGCTCCAGCAGAGTCAAAAACCCATGTATAACTTCAGAGTTGGTACTATGTATCTGAAATTCTGCATTTGTGGATTTAGCCAACCATGGATTATGTACTGTAGAACCTATTTATTAAAAAAGATCTGCATGTGACTGAACCTGTGTTATTGAAAGGTCAATTGTTGTTGAGTCACCCAGTCGTGTCTGACTCTTCGTGACCTAAATGCAAATCGCGTGTTAAATATATATATAAAAAAGGACTCAATATTTTTATATATGATCAATAATTTATACTTAAGTCACTTCAGTGGTGCCTGACTCTGTGTGACCCCACGGACTGTAGCCTGCCAGGTTCCTCTTCCATGGGATTCTCCAAGCAAGAATACTAGAGTGGGTTATCATTTTCTTCTCCAGGGGACCTTCCCAACCCAGGGATTGAACCTGTGTCTCTTACATCTCCTGCACTGGCAGGTGGGTTCTTTACCACTAGCGCCACCTGGGAAGCCCCAAAATATGGAACAATTCATGAATTTGAATGTCATCGTTGTGCACTTGCAATTAAAACCACTGTCTTTAAATACCGAATGATACTGATATGATTGCAGAAAATTCTGATGTATGTTACTTTTATGATACATATTACTTAATATGTCTCCCAGGTAGCCCTGGCTTTTCAGCTAATTAATTCCACAGGCACGCACTTAGGCCTAATTATGGGGTAGATAATATTTACTATTTCATTTACTGCCTAAAAGATGTTTCTCAACAAGTAAGTCTGGAATTCCTTATATAGATAATACTACAGGTACCTATAAGCTTGTTTATGGATTCTGTGTCAGAAATGTGAATGGACAGACACTAAGGAGACAGGGCTAAGTCTTGTGATTAGTTTACTTTTGCACACTCCTCAGTGTCCAGCATGGTATTGTACAAGTTCAGTAAATATTAAAAAAAACTTCTCTAGGTATTCCATTTTGGAATTCTTGTAGAAACAAGTCAATTTTTGAAAATCTTCTAGTGTTTGTAAATTTAATAAATGAAATACACTTGCCATTACTAATCATAAGTTAAAAAAAAAGCTGATGTAAGATTAAGGTTAGAAGTGACTGTCCTATATGTGCTTACACATATAAAGTGGAATTCAAGAGAAGTTAAAAGATACATGAGAAATTATATGGGAGAGAATATGAAGAATAAGGTTAGACTTGATGAAAAAAAAAAACCTGATCACTTTTTGGATAAGTTGCACTTGTAAATTAAACCTTTATGAGGACATTTTGGGGAATGGGGTAAAGTGATATTAAAAAAAACCACCCAAAACTCCCAATATAATAAAGCATAATTCAAATAGGTTTTGGGGAAATTTTAAGTTTTTTAAATAATTTGTTGACCTCTTGATTAACTGGGATTTTTACCATTCCATATACTCTGCAATATAACTAAATAACTACATGTTACAATGTTTTGTTAACGTGTAAGGAAAAAGTAATCAGATTCTTTGACTCTGAACAACTAAGAAATGAAAAGATCCCATTCTTAGATTTTTATATTTGATTTTCTTACAGAAATAACTTCAGTTATTATGCCAATATTTACCTGAAAATGGCAGCCTCCAACAGTAAATAATTGAAATAACCACAGTATCATAAGGAGCTATAGTGAAACAAACAAAATTTTTCCTTCTTGACCAATAAAGTTTTGAAGAATGAAAAACCACAACTATGAAGGAAAAAAGGCAAATGTAAATGGAGGACACGCATCAAAGCCCAGGAGCTAAAAATGAATTATTAGAAAGATGCTTCAAAAAATCAATTACCATCACAGGGAAAAACTATTATGAAAGCAGCTCAAAAAATAAATGAACACTTACCTTTAAAACAGAAATACTTGAGATAGTTTACAATGCCCAGTTAATTACTATATATATTCTACCCCCTCAGATATTTATGAATACTGTATAAGTCAAAAGGATTTGTTTACTTACTGTTAGAAAATTTTTTGTCATATGTGAAAAATTACAACCAATTCTTCAACCATTAGAAAGATGGTTTTCCCACATTTTGAATGTTTTTTTAAATGAAATAATACATGGTCAGAGCATCAATCTCAGAGATTTTTTAGAACAGGTGACTAAAAACCAAGTTCTCCTTATAGGCCAGCCCCAAAACGTTAAGTGATAAAATACACTTTTATCTCTTAGGCCAGCCAGCCTAAACACCTTTCTGGGAGTCAGCAATCTGTGGCCCACAGGCTGAATGTGGCTTGTGGCCTATTTGTACACAGCCCTGAGTCGAGAATGGTTTTTACATTTTTTAAGGGGTTGTA TCONS_00104495 r 5' 0 TCONS_00101634 TCONS_00101636 s 3' 21465 EMBV3_02082 CAGAACCCACCTTCAAGCAAGTAACGAGGACAAGGCCAGGGGAAAGTGGCTGAGAGCAGA Gene BVV0102_291011 + 0 NULL GK000011.2:98615634-98621302 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13838 TCTGCTCAGCGATCCTGCTGCCGGGGCCTACAAAGAGCTGGTGACTTTTGTCAAGTATAT Gene BVT0102_005469 - 0 NULL GK000005.2:57287750-57303354 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192040 TCONS_00192039 TCONS_00192042 TCONS_00192038 TCONS_00192043 TCONS_00192041 TCONS_00192037 1 XLOC_117078 Coding TCONS_00192043 XLOC_117078 Coding Coding TIMELESS 5:57269346-57295674 = TSS143798 4702 1 TCONS_00192043_10 1213 29 0.822501614312303 0.00471617619065405 0.00330928741106173 0.00300961174741877 0.00361881315789826 0.00216429973449504 0.00121014596665026 0.00334260235412589 0.00176623097814295 0.00306157444937143 0.00026269788104819 0.000185517430396255 0.000111492400143134 0.000267296655344015 0.000412647965065645 0.000465222518660754 0.00580051633789749 0.00153930730499549 0.000977440157685977 0.00490541253926046 0.00412053343567122 0.00150622328090606 0.00244977178704922 0.00152356082872762 0.00137669983606507 0.00529324602480654 0.00358965818266755 0.00265987355843649 0.000701050448461198 0.000515967448565913 0.000302654316715714 NM_001102071.2 TIMELESS Bos taurus timeless homolog (Drosophila) (TIMELESS), mRNA. 0.0 8480 100.00 0.999787324542748 NM_003920.3 TIMELESS Homo sapiens timeless circadian clock (TIMELESS), mRNA. 0.0 4610 83.92 0.899617184176946 TCONS_00192043_10 sp|Q9UNS1|TIM_HUMAN TIM_HUMAN Protein timeless homolog; 0.0 2012 87.18 0.997526793075021 0 coding 0 0 0 0 -0.880099524212852 0.000840749813215288 -0.0589641859510695 0.230203239472741 GACCCACACTGGTGGCGGGAAAAGCAGCGGAACTGTGCTTAACAGCTGCTGGCTCCGCGGGGATCTTGAGGAGCGGCGGGGGAGCGGGTGAGTGAGTGTGTGGGCAAGAAGGCTCTAAGTGGACTGCGTCCCTTCGTAGCCACGGGGGCTCTCCTGGGAAGCGCGGAGTCCCCTTTCCCGCCGCCTGGTTTAAAGGCAGGGGGCGGGGCGCGCGCCTTAGGTGCGCACGCGCAATTCCCAGTCGGGTCTCCTCTGTGGGTGTCCGGGCGTTTCCAACTCGCCTGGGACTCCCCCTTGTTCTCCCGAGGTCACTCCGCACGGCCTGGTCCGCCCGCGGGGGTGCGGCTGTGATGGAAAGGGGCTTGGAACCTTTACTATAAGACAGAAGCTTCCCAGGAATTTCCGCTTCTGAACTTCCCATCCAACTCAGACCCGAAAAAAACAGGCCTCGTCATTTCTGTGTCCCTTGGTTCATCCACTGATGTGTGGACTTGAGCATGATGAATTGTGAACTTCTTGCCACATGTAGTGCCCTTGGGTACTTGGAGGGAGACACTTACCACAAGGAGCCAGATTGCTTAGAGAGTGTGAAGGACTTGATCCGCTACTTGAGGCACGAGGATGAGACACGGGACGTGCGGCAGCAGCTGGGATCGGCTCAGATCCTGCAGAGTGACCTCCTGCCCATCCTCACCCAGCATCGCCAGGACAAGCCTCTTTTTGATGCTGTTATCAGGCTGATGGTGAACTTGACACAACCAGCCTTGCTCTGTTTCGGCAGCGTGCCCAAGGAGCCCAGCTTCCGGCACCACTTTCTGCAGGTGCTGGCATACTTGCAGGCTTACAAAGAGGCCTTTGCCAGTGAGAAGGCATTTGGGGTCCTCAGTGAAACTTTGTATGAGCTGCTGCAGCTGGGCTGGGAGGAACGCCAGGAGGAAGACAACTTGCTGATTGAGCGGATCCTGCTGCTGGTCAGAAACGTCCTCCATGTCCCCGCCGACCTTGAGCAGGAGAAGCGGATTGACGATGACGCCAGTGTGCACGACCGGCTTCTCTGGGCAATCCACCTCAGTGGCCTGGATGACCTGCTCCTCTTCCTGGCCAGCTCACCTGCGGAGCAGCAGTGGAGCCTCCATGTGCTGGAGATCATCTCCCTTATGTTTCGTGACCAGAACCCTGAGCAACTGGCAGGAGTAGGGCAGGGACGCTTGGCTCAGGAGCGGAGGACAGATGTGGCAGAGCTGGAGGTCTTGCGCCAGCGAGAGATGGCAGAAAAGAAGACTCGAGCCCTGCAGCGAGGCAACAGGCATTCTCGGTTTGGGGGTTCCTACATCATCCAGGGCTTGAAATCCATTGGGGAGAGGGACCTTGTATTTCATAAAGGTCTCCACAATCTCCAAAACTATACTTCTGATTTGGGAAAGCAGCCCCGACGGGTGCCTAAACGTCGCCAGGCTGCCCGGGAGCTGTCCATCCAGCGCCGCTCTGCCCTCAACGTGAGACTCTTTCTTCGGGACTTCTGCTCGGAGTTCCTGGAAAACTGTTACAACCGGCTCATGGGCTCGGTGAAGGACCACCTGCTTCGGGAGAAGGCTCAACAGCATGACGAGACCTACTACATGTGGTCCCTGGCTTTCTTCATGGCCTTCAACCGAGCTGCCTCCTTCCGGCCAGGCCTGGTTTCTGAGACGCTCAGTGTCCGCACCTTCCACTTCATTGAGCAGAACCTCACCAACTACTATGAGATGATGCTGACCGACCGCAAGGAAGCCGTCTCCTGGGCACGCCGGATGCACCTGGCTCTGAAGGCGTATCAGGAGCTGCTAGCCACAGTGAATGAGATGGATGTGTGCCCAGACGAGGCTGTGAGGGAGAGCAGCCGCATCATCAAGAACAACATTTTCTATGTGATGGAGTACCGGGAGCTCTTCCTGGCTCTCTTTCGGAAGTTTGATGAGAGATGCCAGCCCCGCTCTTTCCTTCGTGACCTGGTGGAAACCACCCACCTCTTCCTCAAGATGTTGGAGCGGTTCTGTCGGACCCGTGGGAACCTGATGGTGCAGAACAAACGAAAGAAAAGAAAGAAGAAAAAGAAGGCCTTAGATCAGTCTGTTGCTTCTGGTAATGCCCCCTACAGCCCAGAGGAACTGGAGGCCATGTGGCCCTCCCTGGCCGAGCAGCTGCAGTGCCGTGCCCAGGATTCTGAGCTCAGTTTGGACTCTGTGGTTCCCTTTGATGCGGCCTCAGAGGTGCCAGTGGAAGAGCAGCGGGCAGAAGCCATGGTGCGGATCCAGGACTGCCTCCTGGCTGGCCAGGCCCCGCAGGCCCTGAGCCTCCTGAGGTCTGCCCGGGAGGTGTGGCCAGAAAGAGATGTGTTTGGTGCTCAGGACATCTCCCCAGAGGAGGAGATCCAGCTACTGAAGCAAATCCTCTTGGCCCCGCTTCCCCGCCAGCAGGGTCTGGAGGAACAAGGGGCGGAGGAAGAAGACGAAGAAGAGGAGGAGGAGGAAGAGTTAGAAGTGGTCCAGGTGTCGGAGAGAGAATTTAACTTTTTGGACTACCTGAAACGCTTCGCAAACTCAACCGTCCTCCGAGCCTACCTGCTGCTGCTGCGGAGCTACAAGCAGAACAGCGCCCACACCAACCACTGTGTGGTCAAGATGCTGCACCGGCTGGCCCATGATCTCAAAATGGAAGCCCTGCTTTTCCAGCTTTCCCTCTTCTACCTCTTCAATCGTCTGCTCAGCGATCCTGCTGCCGGGGCCTACAAAGAGCTGGTGACTTTTGCCAAGTATATCCTGGGCAAGTTCTTTGCTTTGGCTGCTGTCAACCAGAAAGCCTTTGTGGAGCTGCTGTTCTGGAAGAACACTGCTGTGGTTCGAGAGATGACCGAGGGCTACGGCACCCTGGATGGCGGATCTTCTAGCCGCAGACTCCCTGGATGGAGCCCAGAGGAGGAGGCCCAGCTTCGGGAACTGTATCTTGCCCATAAGGATGTGGAAGGTCAGGATGTGGTGGACACCATCTTGGCACACCTGAAAACTGCTCCTCGGACACGCAGGCAGGTCATCCACCATCTGGTGCGGCTGGGACTGGCTGACAGCGTCAAGGACTTCCAGAGGAAAGGAACCCAGATTGTGCTGTGGACGGAGGATCAGGAGCTGGAGCTGCAGCGGCTTTTTGAGGAGTTTCAGGACTCCGATGATGTCCTGGGTAATATCATGAAGAACATTACAGCCAAACGCTCACGGGCCCGAATAGTGGATAAACTGCTGGCTCTGGGGCTGGTGGCTGAGCGGCGGGAGCTGTACAAGAAACGCCGGAAGAAGCTGGCACCCTTGAGCTTGCCTAATGAAGAGGAATCCTTGCACGATTTTTGCCAGGAAGATCTAGAAGAAGAGGAAAATGTGCCAGAGAAAGATAATGAAGAGGATGAAGAGAAAGAAGGCTCAGAAGCAGAGCAACCCCAGGGTGGCTCCATCATTTCAGCTGAATACCTTGGGCAAAGTCTGCACCAGGAAGGCTTTTCTGCTCCCCTCCTCTGGCTCCAGAACTGCCTCATCCGAGCAGCAGATGATCGGGAAGAGGCCGGCTGCTCCCAGGCAGTTCCGTTGGTGCCACTGACAGAAGAAAATGAAGAAGCGATGGAAAATGAACAGTTTCAACAGCTGTTGCGAAAGCTAGGGGTTCGGCCTCCTGCCTCTGGACAGGAAACCTTCTGGCGAATTCCAGCCAAACTGAATCCCACCCAGCTCCGGAGGATGTCAGCTTCCTTGAGCCAAGCAGAAGAGGAGGAAAAGCTTCAGTTAGGATTAGAATCTAAGGTCCCTGGGGAGCCAGGCCTAGAGGAGGAGCACCAACAGGAAGAGGAGCATCAACAAGAGGAGGAGCATCAAAAGGAGCACCGAGCACATGCCCTGAGGACCCTCATGTTAGCCCGGAAAAAGGAAGCAGGCCTGGTGTCGCCAGAGGAGGAAGGGACCAGTGGTGGGAAAGAGCAGCTGATAATGGCACCCAAGAAGCGACAACTGCTGGACAGCGATGAGGAGCAGGAGGAAGATAAAGCACCAGAGTTGGGAGTTCCAGGAATCCGGAAGAAGAAACGGTTTCAGATAGAGGATGATGATGAGAGCGACTGAAGATGCAGATGCCCAGGGCAGATAAACCCCATTTTTAGGTGGTGAATTTGAATCCGAGTTTGGAGGGGCATACAGGACCTGGAAACCCCTCTTACTGGACAGCAGCTGTGGAGCCCCGGACTTCCCCATGGATTTAGAGTCCAGGAAGTCCAGGCAACAGTGTTGGCCTCCTGTTATTTCTTCCTTCTCCCAGTTTTATCAGGGTGCCTCAGTAGCTCTCTGGAGACTTATTCCTCTTCTTTGGTTTTAATAGCACTCCCTGGTAAAGGAGAGGTGTGAATGAAATATAGAAGGCACCTTGGACCCCCCTTAGTGGTCTGTTGTTTTGGCTTTCTGCTGGAGGTGGGTCCCAGCACTAGATGGGGAGTCTTGTGACATGAAGAGTGTGGGTGTTGCAGCATTTTAAAAAGGCTCCCATTCTCATATTCTTTCCTGTAATCATCTTCGAAACACCAGATTGAGCCCAGTTCTTGCCACTGAAGTAAGGCTGAGATGCAGTATTCTTCAGATGATGAATACATTTGGTTGGTGTTTGGCAGCGAATTAAACATGTAAAATGTAAA EMBV3_26593 TCTTCGGAACTAAGATGCCCTTTCCACTCACTCTTCCTTTCTCTGCGTTCCCCCCATCCA Gene BVT0102_024766 - 0 NULL GK000001.2:83820583-83836514 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33675 TTTAAGGCAAAAGTTAACATCGAAGTTCAGCTGGCTTCTGAGCTGGCCATCGCCGCCATC Gene GeneID:510347|MRPL15:NM_001075445:23_cdna UTR3_Alt 2 NULL GeneID:510347 14 GENE MRPL15 MGC143360 mitochondrial ribosomal protein L15 EMBV3_10985 CGAGAGTTTCAGCTGGGTGAATCTGTAAAGTACTGTTCCTCGTCTCCTCCAGCGAGTTCG Variant GeneID:505611|GNA13:XM_002696232:63_cdna 241^442 1 EMBV3_27145 GeneID:505611 19 GENE GNA13 NULL guanine nucleotide binding protein (G protein), alpha 13 EMBV3_16574 GATCTCCCTGTGACATAAACGTAATGCGTAACCACAAGGATCTGAGGGCCTGAAGGTACC Gene GeneID:532076|NR1D2:XM_002698756:19_cdna Constitutive 0 NULL GeneID:532076 27 GENE NR1D2 NULL nuclear receptor subfamily 1, group D, member 2 EMBV3_05320 GGACCACACTGTGAACAGAACTGCTTTAAAAGAAAGGAGGTGTGACTGTATTTCTACTGC Gene GeneID:518291|ZNF382:XM_002694951:81_cdna UTR3_Alt 2 NULL GeneID:518291 18 GENE ZNF382 NULL zinc finger protein 382 EMBV3_08092 TTCAGGTTGGCTGGACTTGGGCATTGGTGGGCCAGTCCTTAGAGAAAGCTTCAATGATGA Gene GeneID:539265|ZNF502:NM_001103101:184_cdna UTR3_Alt 1 NULL GeneID:539265 22 GENE ZNF502 MGC166296 zinc finger protein 502 EMBV3_42495 AGAAGGACCAGCTCATCACCAAGTGCAATGGAATCACATGTCTGACTTCCGGATCCAGAA Variant GeneID:506099|SPATA24:XM_002689265:188_cdna 405^507 1 EMBV3_02066 GeneID:506099 7 GENE SPATA24 NULL spermatogenesis associated 24 EMBV3_40672 CTAGTTACTACAATTACTGGAACTGGATCCAACCTCTCATCATTCCAACTTTTCCATCTG Gene GeneID:509747|KRT222:NM_001046037:100_cdna Constitutive 0 NULL GeneID:509747 19 GENE KRT222 KA21 KRT222P MGC137294 keratin 222 EMBV3_00305 ACGCTGGTGCTTGATACACTGTGAAGTGAATACAACATTGAACAGTTACAGATCTGGGAC Gene GeneID:616217|RYBP:XM_002696972:140_cdna Constitutive 2 NULL GeneID:616217 22 GENE RYBP NULL RING1 and YY1 binding protein EMBV3_34677 ATGTTCCAGACCCTGAAGTACCTGGCCATCTTAGGCAGCGTGACGTTTCTGGCTGGCAAT Gene GeneID:534231|RPN2:NM_001034604:1207_cdna Constitutive 0 NULL GeneID:534231 13 GENE RPN2 MGC127624 ribophorin II EMBV3_00210 CCCACATGTTTTCAACTGAGGGATGCTTCCCTTCCTAAGGCTGACCAAGACCAGTTGATC Gene GeneID:338437|SOCS2:NM_177523:19_cdna Constitutive 2 NULL GeneID:338437 5 GENE SOCS2 NULL suppressor of cytokine signaling 2 EMBV3_13982 AGAATCCTCCTCGACACAATCCTCCCAGCAGCCCTCACTAGGCATCACACTTGAGCCAAA Gene BVV0102_350926 + 0 NULL GK000012.2:20778874-20856478 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21154 CAGACCCAGCCTTACAGCGCAAACTGGCGCGCCTCCGCCACCTTCCCCGGAACCCCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33957 ATTGGAGGACCACCTTTTTGGCAATCTATGGTGGTGTTGGAAAAAATGGATCAACGATAG Variant GeneID:504650|CEPT1:XM_002686145:258_cdna 868^967 4 EMBV3_20676 GeneID:504650 3 GENE CEPT1 NULL choline/ethanolamine phosphotransferase 1 EMBV3_27960 CTCCAGCTCCCGGAAGTCCAGCATGTGCAGCCTGGCGCAGCCCGCCCCTGCCGCCCGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21868 TATCTCTTGGAGCTCACTGGGTGGACTAAAGGGAGTCAAGCCTCCTGAGGCGTTTGGAGA Gene BVV0102_240525 - 0 NULL GK000003.2:74530202-75082358 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00063810 TCONS_00178732 TCONS_00218950 TCONS_00206816 TCONS_00123275 TCONS_00063805 TCONS_00230831 TCONS_00117596 TCONS_00167122 TCONS_00230834 TCONS_00186490 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00149043 TCONS_00161424 TCONS_00116087 TCONS_00101341 TCONS_00111145 TCONS_00088422 TCONS_00222116 TCONS_00106013 TCONS_00238290 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00238291 TCONS_00223049 TCONS_00231769 TCONS_00033186 TCONS_00217532 TCONS_00207410 TCONS_00230833 TCONS_00011614 TCONS_00010443 TCONS_00222183 TCONS_00178734 TCONS_00162571 TCONS_00142474 TCONS_00230354 TCONS_00010832 TCONS_00217533 TCONS_00168478 TCONS_00142472 TCONS_00129561 TCONS_00231774 TCONS_00255144 TCONS_00157807 TCONS_00066112 TCONS_00176791 TCONS_00167922 TCONS_00157808 TCONS_00071703 TCONS_00238280 TCONS_00131535 TCONS_00011615 TCONS_00232767 TCONS_00162567 TCONS_00098201 TCONS_00162570 TCONS_00071451 TCONS_00158314 TCONS_00186834 TCONS_00154284 TCONS_00033205 TCONS_00230832 TCONS_00231776 TCONS_00063811 TCONS_00212984 TCONS_00222175 74 XLOC_090921 XLOC_038536 XLOC_108505 XLOC_132269 XLOC_125336 XLOC_074829 XLOC_038531 XLOC_140321 XLOC_071762 XLOC_101958 XLOC_140324 XLOC_112542 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_090920 XLOC_098315 XLOC_070256 XLOC_061582 XLOC_067045 XLOC_053209 XLOC_135425 XLOC_062697 XLOC_144957 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_144958 XLOC_136355 XLOC_141257 XLOC_019420 XLOC_131531 XLOC_125926 XLOC_140323 XLOC_007165 XLOC_005994 XLOC_135492 XLOC_108507 XLOC_099452 XLOC_086899 XLOC_139844 XLOC_006383 XLOC_103118 XLOC_086897 XLOC_078274 XLOC_141262 XLOC_158076 XLOC_096262 XLOC_040830 XLOC_106565 XLOC_102758 XLOC_096263 XLOC_043473 XLOC_144947 XLOC_080240 XLOC_007166 XLOC_142251 XLOC_099448 XLOC_058447 XLOC_099451 XLOC_043222 XLOC_096768 XLOC_112885 XLOC_094044 XLOC_019439 XLOC_140322 XLOC_141264 XLOC_038537 XLOC_130301 XLOC_135484 Coding TCONS_00207410 XLOC_125926 NonCoding NonCoding - 6:23347892-23353722 - TSS154917 5830 2 TCONS_00207410_9 134 0.0926243567753002 1 0 1.72333371503078e-05 3.12579338021033e-05 8.97322537255123e-06 1.0516600452595e-05 2.14811889678482e-05 1.40288715721895e-05 2.88780016705382e-05 1.12801021788367e-05 6.35072155119095e-05 0.00041251086712145 0.000191001510876784 0.000252096903565238 5.14478876342631e-05 0.000111004556234904 0.000136880232340654 0.00165019416274279 0.000591785563680731 0.00199994435028684 1.75275769134447e-05 2.9993852213128e-05 2.91036372079802e-06 0.000433635055153301 0.000511901343491923 0.000521894878950002 1.55748737310143e-05 1.42774587620872e-05 8.1051534842746e-06 0.000129203216094594 0.000149954028011754 0.00014697972206339 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 3e-112 412 93.12 0.0471698113207547 0 noncoding 1 0 1 1 -0.069690739815313 0.656150057551822 -0.417956814901918 0.00586549399704504 GGGAAATCGGGGTCCTTCGGAATGGGACCACCCACGAGGCCACGTCTGGAATGTCGTCGTGAGACCAGCCTCATCCTGAGGTGCGACCGGAAGGTCGGGAACCCATTCCAGACAAAGCAGGGGAGTCGACCCTCCTGTCCAGATCAGGAGGGTAGATAGGGCTCAGAGGAAGTGGTGCGGGAAAACCTCGGTGTTCCTCTTGAGGGAGACCGGGATGTCGGGGCACTTTGTGGGTCGCAATCAAGGGTGACAAGTACCGTTTCGGCCTCCAATACCTAACGTGGGACTTCTCCTGAGACACTGTAGCGGGAAAGGGCTTCATCTTGCGATGACGGGAGAACCACGTGGATTTTCTCGAGTTGCAGCGGGATTCTCGAGTTACGACGGGGAATTCAGGATGCCTCTTGTGTTGGCCCAGGGAAGTCCAATCTTCCATTCGAGTTGCGAAGGAAAGCTAGAGAATGCTCTCGAGTGACTGCAGGGCCAATAGACCTCATCTAGGCTTGTGTCCAGAAGCCAATGTTCCTCTCCAGGGGCGAAAGGGATCTCGGGGTTGCATTCCAGACGCACCCGGGGAGACAGGCATCCATCTCGAGTGGAAGCAAAGAACTCCGCTCTGCTCTTGAGTCGCGACGGGTATCTCTTGGAGCTCACTGGGTGGAATAAAGGGAGTCAAGCCTCTGGAGGCGTTTGGAGAGAGGTCGAGAGACTGGTCTCTAGGCCATACAGGAGACGAAGGCCCTCAAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATGTTTGGCACAGTAGTCTAGTCCCAGGGGACAAAATACAGGGAAACCTGTTATTACCTGTGGGACTCTGTTTTGAGTGAAGGAAGCAAGCATATAAATACATAAGTTGATATTTGTCACCCTGTATAACTTTTCAAAGTTACTATAAATCAACAAACATTTATTTAAGATAAAGGGAATTGTTATTTAAATATCAGATTTATCCATTATTAAAACTAGATTTGTCTAAATATCTTTCTCCACTATATTTTGTTATTGTTGAGTATGTTTTTTCATTTATAACTACTTTAGCCCCCCCTTCCAGAGACAAGCTAGTATTGACAAAATTAATTTTATTTCACTGGAAATTTTGTGCTCTTGATCTAGTTTTGCTATCCAGTTATATAGTGTAACTAAGAATGGATGCGTTTAGTGAGTTTATTATTTGCCAATCTATGTTAGATGAGGTTTGGTCTCAAAATGGTACCCTTGGCCCTGTTATGTGGGGAGGGTAAAAGTTGAAAGAAGTATTTTATACTTGCTCAAACATCTGATTTTTATCTCCAACTATACTGTGAACATGATATATCATTTAGAGACCTCGAACCAGCTTTGTTTAAATTTGTTGTTTTTAACTTTTAGATCTCCTTGTGTTTTACCACTCCTTGGTTACTTGTTCATGCAATACTTCACATTAATTCTAGTCTTGTTATAATTTCATGGCTAATGTATAACTGGATGTTTTCAACTAGTGGGCTGATGTTAATTTTGTCTTCCCTGTCTTTGAAATGCCTTATTTGCTTTCGTAGTTCAAAGCGTAGAAACTAGATTTGGTTCTGTGTCTTTACCCCCATTTAGAGATAATGCTTACAAAAGAATAGCTTTGAGTAATCTTAAGTGAGCTACTTTAATGGTGATTGAAAGAAAGAAAATTATAGTATTATTCACTCAAGCCATTCTTTGTACTTTGTCTGAATGAATAAGCATACTTGTCTCATAATTATAACTAAACAGGAAGTTAATTTCTTGTCAGTGATGTAATGAGACATGGTATGCAGCACTTATCTCTTAATCCTTAAAGTAAAAGAAACTTTTCAGAATTTCTCAGAAGTTACAAATCCCAAGCTAAATTGACTTTTAAAAGGGCTACTCCTTCCATATATGAAATTGTTCAGACCTGAAAATCTTTTTGCCAAACTCCCTTCTTTTGAAATCACTTCCAGTAGCCATGCATTTCTGAAATATTTGTTTTTCTTCCTTACTGTTTGTTTCTATGTACAGTATTTAAATTTCACAACATTGAAGTTTAAAAATTTTTTGTTTACTTCATAGCAGACTTGATGTTTATAAGAATTAGAGCAATTATTGTCTTACTAGTTGGGCAATTAATACTTCATGTTGACCTTTATCATTGGTCTGAGGATATACCTTTATATTTGCTAGATTGTAAAGCCTCTTTGAGGGTGATTCTTATCTCAAAATTTCTTAAGGCACTTATTCTCTTTGCTTCCTACATCATGCCCTCATCTTATCCATCTCCTAGGGTAATATTTTATGTTGGTCAGTATAGGTTTAAGAGGCAAGATCTGTCTTTATCGTGTGGATTTCCATGGTCATACAAATCTTCAAGTGAAAGTGTTGAAAGAAATTGGCTCTTAAATAAAATACAAGAAATAGCTTATACTAAGGGAATGAACTTTGTTTTCCCCAAATTGATGATACAAAATGTGTCTGTGCTACTTTAGTCATTATGACTTTGATGCAAAATGGATGGCAGAGATTGGAATAACATGATTGTGGAATGTGGTGGTAATTATTATACTTAGTATCATAATTATTGTACTTGACCTTACCACAGTAGTCATCTGAGTTAAGTTTTGCCAAGTCCTTGAGAGAATGATGGAACTAGACAAACTAGAAAAGGTTATTTAGAAAGTTACACCTCAACAGCAGAATTGATTAAATAGGAACTTTGTTTTTGTAAATGTTGGCTTTGGTTATGTTGCTCTAATGAGTAAGTAGTGGTGGTCATTAAAAGAATGTTTAGTGGAATGCATAAATAATAGTTACTGGAGGTTTTGAATCTTACTAATAACTCATCCACCCATATGTCTGGTCTATAATTTGGTTATTCATAATCTTATTTTTTCAATTTATAAGCTAGAGAAACAAAAGCAAATATTTAGCATTATGTTTAGACTTCTGCTCTTAGCCAGTATCTCTCATCCTTCTCATGTTTTACCTCTAATAGTCAATTGTCAAAAATACTGTGTCCCATGATGACAGAAGCAAAGATCTTCCTCAAAATAAACTGTAGGCTTTTGAGTCCCACATAAACAATGGTCAGACTCATTACTGTTTAATCATGTACCTCCAGATGAAAACACTCACTGGCTTAAGCTATACCTGTTGGTTGGCTGTTAGAGAAAATTCATTGACTTATTTTTCTATGGGTCTATTTAGGCTTTTAAGGGAAAGGAGAAGCATATTTCCCAGTGGGAGAAGGCCTGGATTCTCACACTGCCAGGTGTTCAGGAGGTCTCAGGAGAAGCAATTCAAAGGGAAGTGATCCTCAAAGGAGATTTCCCCACAAGAGCACATCATGGTGAAAAAGTGTCTTTTTTTTTTTAATGGACAATACAGTTTTCAGCATTGTGCCCTAGTTATATTAGGGGCTTCCCAGGTGGCATAGTGGTAAAGAATCTGCCTGCCGATGCACGAGATGCGAGTTCGATTCCTGGGTTGGGAAGATCCCCTGGAGTAGGAGATGGCAACCCACTCCAGTTTTCTTGCCTGGAAAATTCCACAGACAGGAGCCTGACAGGCTGCGGTCTATGGGGTCGCGAAGAGTCAGAAGCAGCTGAGTACACACACGTAAGCATACGTAGTTAATATGTTGTTGATCCATCTTAGTGCCCTTTCAAGGTGAGTGAAGCCTTTAGCTAATGTGTGCCAAACTCCCTGCCCCCTATTTTCTATTTCAGTGATCTTGATAGTTGGTAAAGAACCCACCTAAGTAGTGCTTTTCTCTATGGTCTGGAGGTATGGTCAAAGTACGAAGACTTCGTTGGTTATATATATGAGCTGTTCTTTCTGATTCTTGCCGCTGTTCCTCTTAAACTACTAAGAAGCAAAAAGCTGACAATTGAAGTTTTTCGTATAATTTTATAAGTTGTTTTTGTCTCTAAAGCCTTTGAAACCTTTAGGTTCTAAAGTCATTTTGTAAGGTGAACAGCAAAGACAAAATAGCTTTTGAAAATTCTTTGAATAGATGCTACATTGGAAACTGATCTCAAATCCAATAAATACGGTTCTTGCAGTGCCACAAATAATTGTTTTCTTACTTGACTTTAAAGTCCACATAACTTGAAAAATGGGTAACCTAGGCTCAATCTGAGTATAGTGAGATACAAACCAACGGTGAATAAGGAGAAACAAGAAAACACCAATTTTCTGTGTCTTGTTTAATTTGTGGCATTTATTCCTTGAGTAAAATGAAGAGTTGGGTTGGTGGGATTGAAATTTTTGTCTCCAGTTTGCAAAATACCGTGTCAAAGTAGTCATTAACTTTAAATACATCTTTGGAGCAAGGACACTTGAGAAGGTAGCCTTAAATGTATCTCTAGACCTATCTTTTAGGTTGTCTAGTAGATAACACTGCTTTGCTCTCCAACCAGTCCTGAAGCTCAGCGTGTCTTACATTTGGTTTGATTCAGTCTTTGCTTTCCCCTCTTAAGGGGGCACTAATGTAAAATGGATAGAAGACCTATTTCCATAAGATTGTAAGGGTAAAGTGATCAGTGTGTTAAGATAATTTTCATCCTTGGTGACTTAAGTTTATGTTCCTAATGTAGTTATCTATTCATCTATCCTTTGTAGCAGGAGTTCCTACAATATGTGGGTGAGGATGGTCTTTGATATCCCGTAAGTTAAGTAAAAGTTATTGTGTGGGCATCTGTATTAGGGATAGAGGGTCAGCAGTTCATCAGATTATTAGAATTCCTAGTCTTTGTCACAAATAATGCCATGTACATGGCTAGGAGTGTATGAAAATGTGAAGAAACTACAGAAACCAAATTTAGGATGGTCAAAAAAATTTAGGATAGTCTTGTTAACTTGTCAGGGAAAGGGATGGGTATGTGGGGAGTACATGAAACATCTGCAACACTTAAAATCTGAAGATCTAGAAAGTCAGTCATTTCTAGTATACTATTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCGGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCTAGTGCAGGAGAGTAGAAAGTGAAAGTGAAGTCGCTCAGTTGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCCACGAGACTCCTCGGTCCATGGGATTTTCCAGGCAAGGGTACTGGTGTGGGGTGCCATTGCCTTCTCCAATACTGTTGCTGGTACATCAAAAAATTCAACCATTTGTCTTGCTCAGAAAGCGATCAATGGCTTCGCATTGCCTGTGGAATAGGCTTTGCCATAGTATTCAAGACTCGAAAGATCCAGCCCTGATTAACCTTTCTAGCCATATCTGCTACTCTCTTAACCTGTACCCCACTGTGTGTCTGGTATACCAAACTACAAGCAAGTTTTTTAACATCCTGTTTTCTTTCACTCCCCTGGATTTTAATTTCTCTATCTTGAATGCTTATCCCTCTATCAAGACCGAGCTCAAATATCACTGGTTTAAACTCAGGCAAGGTTAATGATAACCGTTTCAAAATTCACAAAGCAGTTGAATGCCTTTTAAGTATTCAGGTTGTTTGAAACGTAATTTTTTAATTTTTTTATATTATGTCTGCTTTCTATTAGTCTATTGGGGAAGGCATTCATGGTCTATCTTGTTATTTTCAGATGTAATATGCTTGACACCAAAAAGGCAATCTCCATATAAAT TCONS_00202772 . 5' 97 TCONS_00202772 . 5' 97 EMBV3_40009 CCTGGTCTGGGGAAATAGTCAATAAACATACAAAGGTAATGAATGGTGTGTTATGTACCC Gene GeneID:614118|TSEN15:NM_001076312:29_cdna UTR3_Alt 4 NULL GeneID:614118 16 GENE TSEN15 C16H1ORF19 tRNA splicing endonuclease 15 homolog (S. cerevisiae) EMBV3_18563 GCTGACTACACCTAGACTTCAACTTCTACATCCAGACAAAACATTAACCGCCACATGTCG Gene BVT0102_009253 - 1 EMBV3_21167 GK000004.2:13529585-13544268 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19849 TGGATCTTCCAGGCCATAAAGACTCACTCCGAAGCCAGCGGCATGGTAACCCAGCTTTGA Gene GeneID:508148|HPN:NM_001080241:562_cdna Constitutive 0 NULL GeneID:508148 18 GENE HPN NULL hepsin EMBV3_35742 CGCTGATGGAGGAGACCATGAAGGAGGTGAAGGCCTGGCGCCAGAAGCTGCACGGGCGCC Variant GeneID:281004|APOE:NM_173991:26_cdna 329^736 2 EMBV3_23589 GeneID:281004 18 GENE APOE NULL apolipoprotein E EMBV3_35469 TATGAATCAGCGGCCCTATCCAGACATACCTGAACCTGGATGGATTGAGCACCACCCACA Gene BVT0102_028392 + 0 NULL GK000015.2:37083116-37874410 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059003 TCONS_00059001 TCONS_00058999 TCONS_00059002 TCONS_00058998 1 XLOC_036243 NonCoding TCONS_00059003 XLOC_036243 NonCoding NonCoding - 15:37768454-37769371 - TSS44341 508 1 TCONS_00059003_1 45 2 0.447598253275109 2.66854731423061e-25 0 0 3.30581372028999e-234 0.00012634514130072 2.11243452042946e-05 0 0 1.19349829870957e-79 1.61988211466959e-05 0 0 0 0 1.6558883678898e-05 0 0 0 0.000959104281869099 0.0018179862240717 0.000156182879636639 0 0 0 1.2631021699943e-12 0 0.00156088809627229 0 0 0 0 noncoding 0 0 0 0 -0.600059569276316 0.0756407226790935 -0.00576881948639607 0.909901658138965 AAGGAAGGTGTCTGGGCTAGGAATGTCTTAGACATGAATCACTGAGGCTGCTCCAGGGACCTCTGAAGACCTGGATCATGGGCTACTTTGTCCCTTCTCTCTGCACCAATAGGCCTCTTTCCCAAATGCAGATTATCAGCTTGTGGAAATAGATGCCTATGAATCAGCGGCCCTATCCAGACATACCTGAACCTGGATGGATTGAGCACCACCCACAAGTCCTCTGCCAGGTGTTCACTGAGTGGACTGCCCTTGCTTCTCTCCACTTAAATTTCATTCTCCATCTCTGACATCTCCACTAAGTTCTCACAAATACCTCAATGCAGTATACACTGCTGCCTCATGTTCAATATGTCCAGAAAGGTATTTAACCCATCACTACCCATGCAAAAAATAAAAAAGTAAAAAACCTGCTTTCCTCCTAACATCTGACTTTCAATGACAATTTTGTGTTTCTAATCACCTGGGGATTAGAACCTTAGCTACATTTTGAGTTCACCCCATTTCC TCONS_00061116 TCONS_00061117 TCONS_00061118 TCONS_00061119 TCONS_00061120 TCONS_00061121 TCONS_00061122 TCONS_00061123 TCONS_00061124 r 3' 104125 TCONS_00061116 TCONS_00061117 TCONS_00061118 TCONS_00061119 TCONS_00061120 TCONS_00061121 TCONS_00061122 TCONS_00061123 TCONS_00061124 r 3' 105041 EMBV3_42896 AGGAGCCTTCTGGGGTGTTGATGACGCTGCTGAACAAGTTTGGTGACTGTTCTGAGCATA Gene GeneID:100337343|LOC100337343:XM_002685760:546_cdna Constitutive 0 NULL GeneID:100337343 2 GENE LOC100337343 NULL zinc finger, DHHC-type containing 18-like EMBV3_15203 GATAGAGAGGTTAGAAAATATCAGGGGAAATCACATGTAGTAAAATTAGGATTGCTCCAT Gene BVV0102_172218 + 0 NULL GK000008.2:59548165-59587072 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42840 GCAGTCCAAGACTCGGCACAGGTTTTAGAGGAAAGAGTCGAACATGAACTAGGAAGCTGG Gene GeneID:532622|SETD8:NM_001046330:222_cdna Constitutive 0 NULL GeneID:532622 17 GENE SETD8 MGC134426 SET domain containing (lysine methyltransferase) 8 EMBV3_23493 CTTCTCTCTCTGCAGAGGCTTGGGATTCAGTGAGATAGTTCTTGAGAGGTGGTGTAATAA Gene GeneID:507722|VPS24:NM_001035051:56_cdna Constitutive 3 NULL GeneID:507722 11 GENE VPS24 MGC137735 vacuolar protein sorting 24 homolog (S. cerevisiae) EMBV3_36925 CAATAGAACTCATCTAAAAACGGATTTGGGGATAGGGGAAACATGCACAGAAATCTTTTC Gene GeneID:529373|MYST3:XM_002698707:115_cdna Constitutive 0 NULL GeneID:529373 27 GENE MYST3 NULL MYST histone acetyltransferase (monocytic leukemia) 3 EMBV3_15591 AATAGGTCATCTCTTGGCCCGGAAAATCTGTCAATTCCTCCCTGGAGCCTGGGCGACTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33200 TCCTCATGCTGGTGGAGGCATTGGGTTGGAACGAGTGACTATGCTGTTTTTGGGCTTGCA Gene GeneID:510162|DARS:NM_001035085:8_cdna Constitutive 0 NULL GeneID:510162 2 GENE DARS AspRS MGC127203 aspartyl-tRNA synthetase EMBV3_09703 AACATCTAGAGCAATATCCGAGCATACCTCATCCTTGACCTTCCCCATCACCCTGTCCCG Gene BVV0102_074620 - 1 EMBV3_00715 GK000016.2:65134058-65184702 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069942 TCONS_00069945 TCONS_00069939 TCONS_00069941 TCONS_00069938 TCONS_00069943 TCONS_00069940 TCONS_00069944 TCONS_00069937 1 XLOC_042098 Coding TCONS_00069945 XLOC_042098 Coding Coding LOC781543 16:65179907-65237309 j TSS52048 5849 2 TCONS_00069945_1 180 0.0627457685074372 9 0.898259612201878 0.000973942623680477 0.000395980764114803 2.39230420061352e-05 1.43256276885817e-09 0.000126774609644556 3.84219472368813e-05 0.000177358805364028 3.39380908560919e-07 0.000204678389264221 9.70808199346673e-08 4.90631865027041e-25 8.12810728677286e-14 5.25909444966452e-07 0.000786163995260916 6.7879022891166e-05 2.73814312050193e-18 0 9.68232706131274e-18 5.43879461889549e-08 0.00144538793778382 7.37593717611885e-08 1.93890452037771e-18 3.03970430614632e-05 8.24328290277265e-10 0.00120087884543559 0.000713746597297228 0.000932497765402119 2.09466298632623e-11 5.59967894153486e-11 1.72864862321401e-22 XM_003583265.2 RGS8 PREDICTED: Bos taurus regulator of G-protein signaling 8 (RGS8), 0.0 1.020e+04 99.98 0.967173875876218 XM_005245555.1 RGS8 PREDICTED: Homo sapiens regulator of G-protein signaling 8 (RGS8), 0.0 2778 78.15 0.580612070439391 TCONS_00069945_1 sp|P57771|RGS8_HUMAN RGS8_HUMAN Regulator of G-protein signaling 8; 9e-132 371 99.44 0.994444444444444 1 coding 0 1 1 1 -0.070500698409095 0.564047931393736 0.00570352378502591 0.932195848898145 ATGTGTCAGCCAATAGGCGGGCAGGACCAGCCTGGCAGCTGAGGGACCCCCTCGCTGGAGCGGAGACTTGGGTGATGCTGACACTGCTGGTCCAGGGACCACGCTCGGAGAATTACTGTACTAGGGCAAGCAGGAAGAGAGAATCCTCCTTGTGGAACTGAACCGGGCAGTGTGAAGATCCATGTGGAGCTCCTTACCCGCAGCCTCTCTGACCATCCCGTTGGCAAAGACGCGCAGGCCATGAGGACTGGTCAAAGACACCTGTGCCTGTGATCCCTGCAAAGGAGCAAACCTGAGTGGTGACAGCGCCTGACGAGCCTCCCTTGGAGTTCTTCCAACCTTCCTCCCGCTCACGCCCTCCCCGGGCTCCGGCACTCCCACCTCCGGGACAGGTCCCCTTGGAGGGAGGTGAGAGGACGTGAAAGGGTAAATCCCTGAGCCCTGCAGTCTTATCTCCCGCCCTGTCGTCCCTGCACATCAGCCAGAGGGTTAACCATAAGTGGGCGCCCGTATGGCCGCTTTACTGATGCCACGCAGGAACAAAGGGATGAGGACTCGACTGGGATGCCTGTCTCACAAGTCTGACTCTTGTAGCGATTTCACAGCCATTCTTCCCGACAAACCCAACCGTGCTCTAAAGAGACTATCCACAGAAGAAGCTACAAGGTGGGCAGATTCCTTTGATGTGCTTCTCTCCCATAAGTATGGAGTGGCTGCCTTCCGCGCCTTCCTGAAGACGGAGTTCAGTGAAGAGAACCTGGAGTTCTGGTTGGCCTGTGAGGAGTTCAAGAAGACCAGGTCAACCGCCAAACTGGTCTCCAAGGCCCATAGAATCTTTGAGGAGTTTGTGGATGTGCAGGCTCCGCGGGAGGTAAACATAGACTTCCAGACCCGAGAAGCCACGAGGAAGAACATGCAAGAGCCATCCCTGACTTGTTTTGACCAAGCCCAGGGCAAAGTACACAGTCTCATGGAGAAAGACTCTTACCCCCGGTTCCTGAGGTCCAAAATGTACTTAGATTTGCTGTCCCAAAGCCAGAGGCGGCTCAGTTAGAACTCAGATGGGGACTCTTGGAGATCACTGGCTTCCCCTTCCCCTTGCTGCCAAGACCATATTCTAATGTGACGTGTCATAGGTGTTCAAAAGCAGTGGCGATTAGGTTGGAAGGCCAGGAGTGAGGAACGGATGAAGAGCCATCCCAAAGTCTGATCAGCCGCCGGAGCTCGGACTCTGTCCTGCCCCCTTTACCCGTGTTTGTGTCTTGGTTAGTGGTAGTACTTTGTCACCCTTCTTTGGGTTGGCAACTTGCTCTTCATAAGGCCTTGGGTCATCTCCACCAAGAAGGGAGATTTGCTGTGCTGGGCTAATCTGTAAATAATGCAAAGGCAATTTCCACCACTTCCACACGCTCCTCATTTAGGATTCCTGACTCTTTGAACTTCTCCTAGACCCCTGTGAAGAAGGGCTGGAAGACTCAGGATCACATTTGTGATTTGCTGTCATAATGTAATGGCCAGTCCTGGGTGCTGAGACCTCAGTGTTATCTGGGGTTTTCCGCACTGTCACTGACAGGTGGCCTCTGAGGAAAGGGACAAACTCCATGAAGTTGGCTATTTCTTCCATTTCCATAGGACCAGTATGAAAGGCCGTGATCACTGCCCATCCCAACCTAGGAAATTCACAAGACTCCTATACACTTGCAAATCCAGGAAGGATCTTGGGAGACGTCCTTCATCACTTCTGATATAGAGCTGCTATTGAGAAATAGACAGCTTGCAAGTCTTCCTCAGTTCTACCAAGAAGTTTTCCAGAAGTTGAATGAGCAGGGAATGTAGCACCAGTAGACTTTTGGGCAGCGGGGCACCATATAACCTCTCTGTTGCTTAATGTACACTCTGTCCTCACCTCCCTGTGGCATCACACATCACTGACCCCGTAGAATGATGGACGGCTTGGTAAAGGGAGGTGAATTCCCCTAGCATGGACAGCTCTCATGTGCCTAATACTTTCCCTGTCTCTCCCTCTTCCCCACTCCATGCAGGTCATGTAATTCTGATGGGGGAGAATGGGAACTTAGGCTGTCACTCTCTTTCCAGCTTGCTTCCTGGGAGTATGCTTTCTTAGAAAGGTCCCTCTCATGAGGGCCATCTTGGCTGATCAGCCGCTTCCTTCTTGATGTTTTGGGATTGAAAATGGAAGCGAAAGTGAAGCTGAGAAGATGACTGTGAACATCTGGTTTATGGAGAACCTTCCTTCAAGGTGACTTCATGGTACCCTGGTGCTGCTCTTGGAAGTACATCAGGAAACTCTTCCTTGGATGGTGAGTGAGATGCAGGAAACCTTTTTCTGGCTGCCCAGGAAGAAGCTGACTTTGGCCCAAGACTGTGGTGCCAGGGAGATGGAGCCTCAGCAGAGAGACCAGAAAGTGGAAGAGGAGCCTGGGAGGTGCTGGTCTCTTGGTAGACTGAATCAGAGAGAACGGGCTGGAGGTCACTCGGGGTGATTGACAGCCGATGGATTTGGATTCAGTGCAGAGTTCCAAAGCTTTCAGCTGGACTAAATGAAGCCACACAGGTGTGGGTTCTGCAGCACAGGTGACTGAGGCCTTGGTGGAAGCTGTCTCGTCCTGGGGGAAGGATGGGCCTCTTTAAATGTGAGGGTATTCCACGTTTGCATTCTCGTCCAGCAGCTTCATGAATCTCTTCCTTCCTCGGCTACAGCTACAACAGGCCAAGAAGGCTCTTGAGTCCCACTGGCTGTTAGGGTCCGCTGCCCTGCTGTGTATCTATGAGCATTTGTGAATGAGAGTTGATGTGTCTGTATAAACCATCAAGGAGAGAGAGAACACAGGACTCCTGAAGAGACCTGTGGAATTTCATGTTCAAGAACTCTGCAGCCTTATGTGGGTGTTCCTAGTTAGATCGGGTAGTATTCCCCCGTCCTCATTGGTGAAAAACCATCCTTAGCTTACGCTGCCAGAATTAATTTAATGATCAAATTCTCAAACAGGGTATTTCCAACGTTGTTTACATACAAAACGTGCATCTGCTGCCAACTCTACTGTCGAACATGAAGGGCATGTAAATTGGAACAGCACTGAGTTACAGAAACATGAAACGTTCTAAGAGGGGCCTTTTTACCACTTCCACTGTCCCCAGGAGAAAAGTCTGAACAAGACTGTTGTACCGGGGAGCCTAGGGTTCTTCCCAAACTACTGGTGGAAGGAAGGCAGCAGATGGTGATGTCATGGAGCCTGGTGACTTCCTCCCACGATGGGGAGGTGTGACGGACCCAGCTTGGGTATCCCGAAATTTGCCACTAAGTGAAGGGTGGGTGGGTTTGTGTTTGTATGTAGAGGAACGTGATAGCTATGTTTATGGTACTCCCATGGAGAGAGAGAGAGTGTGTGTGTGTGAGAGAGAGAGAGAGAGACAATTAAGAGCACTAGACTAGTACACCACAGAGATGATCTTCCCATGGGTGGAGCTTTCCTCACACCCTTTATGTTCTGCTTCCCACAAGTGGCACAGGGCTCTCTGCTCTGATGCTTCTTTCAGGCACTTTGGTCATGCCAACCCAGATTCTGGTCTGTGACGAAACAAAGAGAAATGTTTACAACATCTAGAGCAATATCCGAGCATACCTCATCCTTGACCTTCCCCATCACCCTGTCCCGCCCGCTCCCCTGCCCTCTTCACAAGCCCTCCTCTGCCTCCTTAGGGGGGCATCCCCAGGGGCCACTTCTCCCATTTGCCGTCTTCCTTGGCGCCTTGTGCCGGGCTTGTGCTGTGGCCTGCCTTCCGGGCGCAAGCCGTGCAGTGGGCCGGGCAGAGCTGTGACGTTTAGGGCTGCTCTCCTCCCTGAGTGGCCTTTCAGCCCCACATGAGTCGTAACCGATTTGGGGGCTGGTGTGAGATTTCCTGTCGCCCTCGCTAAACCAAATACAACATCATCAATGACAACCCTTCAGAGCTCTGGGCACCTCTGGGGTGAGGAAGGATCCCCGAGCAGCATCTATTATGAAACCTGAGGATGTGCAGGGGTTACCCAGAAAGCCTGTTACAATTGCTAATTCCCAGCTTCCACACCCAGAGATGCTGATCTGATAGATCTGGGGTGGAACTCAAAAATCTGCATTTTTAATAAGTTCCCAGGTACGTAGTGGCTTGTGAACCATACTTTGAAAAAAGATGGTCTAAGACAGTGGTCTAAGACAGAAGCTCTCCCCCTTGGCTGTTCAGTGGAACCACCCGGAAAGTTGAAAAAACCCAAATGTCCAGATCCCACCCCAGACAGCTTGGGGTTGGAACTCAAACATCAGTAGTTTTTAAAGCTCCAAAGGTGAATTCAATGTGCAGATGAGGTTGGGAAGCTGGACCCGAGGAATGGGGAGGGAGGGGTGGTGGTCTCCAGCTGGTCTCAGAGGGCTAGAGCACACCCAGCCACAAACAAGCACAATAACCAGGAACCTGCCAGCCCTGAATCTGACTCCTAGGGTGGCTGTCTCTGTGCCCTCTCTGACTTGCTCTTTTGAGATAAAAATATTTCTGTCCCAGCTGCATGCATGGGGTATGCCAATGGTGGGGGCTGAAGGGGTCCTTGGGGTTTTCTATGGCTCCCGGCTCTTGTTCACAGGGCTTCCTCCAAGCTTGCCTCGTGGGCTGCTTCTCTGTTTTTTGTTTGTGTTCATGCACTCATGTGCTTGCTCATTTCATGTTAGGCTGTGCCTCTGTGCCCAAGACCATGAAACATGGGAGCTGGTCTTAGGTAGCGGGTGAGGAGTGCATAGCAGTAATAATAGTGGTAGCATGACAGCTTCAGATTTCTCAGTGGAGGGTGTCACACCCTCAGAAGTGCAAGCTCTTTGAGGCTTTCTCTGCCAAGGCCGCCGTGGGGTTTGGGTTGTTGCTCTGCGCCCTCACCATTCCCTTGTTGGTCTCAAGCCGGGTGGGCAGCTGGGAAGCTCCTAGTTGATTTTACTCTCTGGTGCTCTCTGCAGAACTTGCTGCTCTGGATTAACCAAAGCTGTGAATGGCTCTCCGCCCAACCTGCAGGCCCAGCCGCTGGGTGCAGGCCCTGGGCACGTGTCCCCAGCACGGCCGGGTATCCAGGTGTGAGGGCAAGGCGTGAACTCACTGTGGTTGAGCAGCGGGGCTGCGGGTGGGATGAAGACAAGCTGCTCCTGTGGCATCTGCTTCTCCATAAACCGGAAAGGAGAGGTGGTGAGTGGTGAGTTCAGAGGCAGGATGTCTCCCATCATCGAGAGCACCCAGACCTCTCCTGACCCCTGTCTGTGCCCACTTCCCAGCCAGGCAGAGGAATTAGTGATTTTCCATCTGAGGCTCTCTTGCAATCTGCCAAGCATTAGCCCTCTTTAAATCTGCATCCTCCGTTTTGAAAGCAAAAGAGGTGGCGAAGTCACCCCCTGGCACGGGGAGCCTGTGCCACTTGGCATGAGACTGAGAAGGAAGAAGCCAAGCGCGGAGATGTCTTCCTGTCCCTGCGACCTCGCCGAATCATGCGATGCCGTGGTCCAAGTCGGCAGGATGAGGCCACTGGCCGTCCCAGCTGTGGGGGCCGGGTCCTGTCGATACACTGGTCCCCTTCCTGCTTCTTCCTCCCTTCTGCCCCTTGGCTCCCTCCCCTCTTCCAAAGACAGAACCGGTGGCTGGGCTTGTGTGCCCTCCGGGCGAGGCAGCGTTAGCTGCCGAGTCACGGGGCGCAAGCGCATCTGTAGCAGCTCATCCTCATTGAATTGTTTCATTACTGTGCAAAGTGGAATAATGTCATTCACCTCTACTATAAACAAGGCTGTGAGAACATAATAAACCAAACCTGAACACGCTGC EMBV3_28340 TCTACAAAGGCCTGAGCATGAACTGGCTCAAGGGTCCCATCGCCGTGGGCATCAGCTTCA Gene GeneID:504608|SLC25A42:XM_002688522:96_cdna Constitutive 0 NULL GeneID:504608 7 GENE SLC25A42 NULL solute carrier family 25, member 42 EMBV3_42968 ACTAAACCAGGAGCGGCCGACTTGGACCTTCATGGTCGTTCTGGGGTTGGAGTTTTCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10306 GTACAGAAGGTGATATGATTGACCCTCATGACTTTTCTGTTTGCTGGGATTAGGTCTGCA Gene GeneID:538532|GOLIM4:XM_002684944:189_cdna UTR3_Alt 2 NULL GeneID:538532 1 GENE GOLIM4 NULL golgi integral membrane protein 4 EMBV3_35163 TCTGTCCCATCAGACACACAGGCTTCCAGCTTATCAGTTGCACCGTCCTGCAGCTCCTTT Gene GeneID:281917|MOCS1:NM_001013597:6_cdna Constitutive 0 NULL GeneID:281917 23 GENE MOCS1 NULL molybdenum cofactor synthesis 1 EMBV3_33204 TTTTGCTGACATGTGAAGTTTGCCATTCAGTCATTTCAGTGTGGTCACCAGCTCCTTGGC Gene GeneID:508836|SNX10:NM_001075375:127_cdna UTR3_Alt 3 NULL GeneID:508836 4 GENE SNX10 MGC139527 sorting nexin 10 EMBV3_32919 GATTTACTGGAGAAATCTGGGAGGCCCTTTGGTGAAGGTTAGAATTTGCGCTGGGACCTT Gene BVT0102_060077 - 1 EMBV3_36806 GK000011.2:72312022-72315286 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025397 TCONS_00025403 TCONS_00025400 TCONS_00025401 TCONS_00025402 TCONS_00025398 TCONS_00025399 1 XLOC_014747 Coding TCONS_00025401 XLOC_014747 Coding Coding GTF3C2 11:72292290-72313668 j TSS18445 5334 1 TCONS_00025401_7 909 0.0864266966629171 19 0.751368293025214 0.0007026655253385 2.63526558181735e-09 8.75868445487207e-05 2.01041670744842e-13 0.000108754192546239 0.00019448723034279 0.00128477709444669 1.28304735209956e-17 8.67002729350334e-05 2.53543534630421e-05 8.69742260492487e-06 1.22293049353288e-20 6.8521821329657e-16 1.19893987935219e-09 1.03661289284362e-12 0.00023685875684655 2.18975757134284e-12 1.33535717604872e-14 0.000963269416135242 0.000307434915902485 1.55525470097556e-08 1.92714358355393e-23 7.51067546881232e-06 2.90881984861452e-11 0.000185785281857769 0.000636441815932698 0.000181106688071654 0.000143822843358537 2.42060195515026e-05 0.000104009098498271 XM_005193935.1 GTF3C2 PREDICTED: Bos taurus general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant X2, mRNA. 0.0 6516 100.00 0.677165354330709 NM_001035521.2 GTF3C2 Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant 2, mRNA. 0.0 4832 89.80 0.678102737157855 TCONS_00025401_7 sp|Q8WUA4|TF3C2_HUMAN TF3C2_HUMAN General transcription factor 3C polypeptide 2; 0.0 1552 89.35 0.998899889988999 1 coding 0 0 0 0 0.0729819957438252 0.637858940395403 -0.0259557949437195 0.612848217711328 CTTCGAACTTGGACTTCCGGAAGGACTTTGGTGAGGGGGCAGCCATTTTTTGGGGTGCTAATGGATACCTACGGGGTCGGCTATATGGCTCTGGAGGAGGCCGGCCCCGTGGGGAACATGACTGTGGTAGACTCTCCTGGACAAGAGGTGCTGAACCAGCTTGACGTCAAGGCCTCCTCAGAAACAACCAGTGTGGAGGCTTCCATAGAGATGCCATTATCTACCCCTTTCCCTGGATATGAGGATTCTCTGGATGAGAGGAGGCTCCTTCCAGAGCAGGAAAGCCTCTCCAGACTGCAACAGCAAGATCTTTCTTCAGAGATGTCAAAGGTCCCAAAGCCTAGGGCCTCAAAGCCTGGCCCGAAGAGAGGTGGTAGGACACGGAAAGGCCCCAAAAGGCCCCAGCAGCCTAATTCTCCATCAGCCCCTCGGGTTCCTGGTCTCTTAGATCAATCCAACCCTCTGTCCACCCCCATGCCTAAGAAACGAGGTCGAAAGTCCAAGGCAGATCTGCTACTGCTGAAGTTGTCCAAAGGCCTAGATCAGCCAGAGTCTCCACATCCAAAGATGCCCCCTGAGGACTTTGAGACCCCTCCTGGGGAACGACCCCGCCGAAGGGCTGCCCAAGTGGCACTTCTGTATCTTCAGGAACTGGCGGAGGAGCTCTCAACAGCGCTGCCTACTCCAGTGTCCTGTCCTGAGGGCCCCCAGGTGAGCAGCCCTACCCAGCCGAAGATAATCCAGCCGCAGGCAGCCTGTCTCCGTGGAGAAGGGGATAACACCGCACGGGATGAAGACTTTGTTCTCCAGGTTGAGGCTGAAGAAGCAGAAGAAAGCGAGGCCCCAAGTGAGAACTCTTCTGACCCCGAGCCTGCAGCGCCCCGAAGCACTACCCGAGGATCTACTCAGAAGCAGAAGCCACACGTTCGGGGAATGGCTCACAATGGCTTACCAAATCACATCATGGCCCCTGTTTGGAAGTGCCTTCATCTCACCAAGGATATCCGAGATCAGAAGCATTCATACTGGGAGTTTGCGGAATGGATTCCTTTAGCGTGGAAGTGGCGCTTGTTATCTGAACTTGAGGCAGCTCCCTACCTGCCCCAGGAGGAGAAGTCCCCGCTGTTTTCTGTACAACGTGAAGGACTTCCTGAAGATGGCACCCTCTACAGAATAAACAGATTTAGCTCTATCACTGCACACCCAGAGCGCTTGGATGTGTCTTTCTTCACTGGGGGCCCACTCTGGGCTCTGGACTGGTGCCCAGTGCCAGAGGGGTCAGCAGCCTCGCAGTATGTGGCTCTTTTCTCCAGCCCTGACATGAATGAGACACACTCACTGAGCCAGCTGTATTCGGGCCCTGGGCTGCTCCAGCTCTGGGACCTTGGGACCTTGCAGCAAGAAAGCTGTCTTGGCAACAGAGCCCACTTTGTCTACGGGATAGCTTGTGACCACGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTGGAGCATGGGAACTTCCAGGCACCCCTCGGAAGGCTCCTCTCCTGCCCCGACTGGGTCTCCTGGCTCTTGCCTGCTCAGATGGGAAGGTGCTGCTGTTCAGCCTGCCCCATCCCGAGGCCCTGCTGGCTCAGCAGCCCCTAGATGCAGTGAAGCCTGCCATCTATAAGGTTCACTGTGTGGCAACCCTCCAGGTAGGGTCTATGCAAGCTTCAGAACCCTCTGAGTGTGGTCAGTGCCTTAGCCTGGCTTGGATGCCCACCCGGCCCCACCACCACCTGGCTGCTGGATATTACAATGGCATGGTGGTTTTATGGAACCTTCCCACGAACTCACCCCTGCAGCGGATACGGCTCTCTGATGGCTCCTTGAAGCTCTACCCGTTCCAGTGTTTCCTAGCCCATGACCAGGCTGTGCGTACTCTTCAGTGGTGCAAAGCTAACAGTCATTTCCTGGCCTCTGCAGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCGACGACCTTATGAACCAATAAACTCTATCAAGCGCTTCTTGAGTACAGAGCTGGCCTGGCTGCTCCCCTACAATGGTGTCACTGTGGCTCAGGACAACTGCTATGCCTCTTATGGACTCTGTGGAATTCACTACATTGATGCTGGTTACCTTGGTTTCAAGGCCTATTTCACTGCTCCTCGAAAAGGCACTGTCTGGAGTCTTTCAGGATCTGACTGGCTCGGGACAATAGCTGCAGGAGATATATCTGGAGAGCTCATTGCAGCTATATTGCCTGATATGGCACTGAACCCAACAAATGTCAAGCGACCTTTAGATCGAAGATTCCCTATATATAAGGCAGATCTGATACCATATCAGGACAGTCCTGAAGGTCAAGACCACACTTCTGCTTCATCTGGGGCCCCAAACCCTCCCAAGGCTCGAACTTACGCTGAAACGGTCAACCATCACTACTTGCTGTTTCAAGACACAGATTTGCGTTCGTTCCACGGTCTGCCCCACAGAGAACCGATGCTGCGCATGCAGGAGGGAGAGGGGCAAACACGGCTCTGCCTGGACCGGCTGCAGCTGGAAGCTATTCATAAGGTACGTTTCAGTCCAAACCTGGACTCTTACGGATGGCTGGTCTCTGGAGGGCAGTCGGGGCTGGTTCGGATCCATTTTGTCCGTGGACTCACCTGTCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCATTTCAGTGCTATGTTCCAGCTGGCCTCCCCCTCTCCAGGGCCTGGCTTTCCTCCAACCAGCCATTGCCTTCTGCCCGGTCCCTAGTCATGGTCCCCACAGGACCCTTGGAATGAAGTCTGCCGAGAACAATTGGCTCCGAGCACACAGCCATAGGAACTGGGGCCTTCCTGGACAGTGATGCTGCCAGGCCTGGATCTTTAGACCTGCCTCCCCAGGACCCCTTAGATCCCTCTCCTTCCACAGACTTCTCCTGTCATCATGGCCCCCCGCGGGCAGGGGGGTTCTCCCTCCACAAACTCTCAAGTCTCAGCATAAAACTATGACTCACAAGAAACACTCAGCCTGTCCTAGGCTTGGGAGTCAAATTGCTCATATTGAGCATATTGTGAAGTGGGTAAAGCTAAGTAAAGGTACTGGGTGTTTTTGAGACCACATGTGAGTGGGTGTTTGGAGAACTGGAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATGTTCTGGATCCAATATTACTGCCTTCCTAACTTCCTCTTTAGAGTACCCAACACACAGGCCCACGAGCAGGTGATGGTAACTCATTGGACTGAAGCTGCTTATAGGACTTCCTTAACTAAGGAACACACCACAGACGCCCTGCCAACAGAAGAGTGGCTCAGATCTTACTTGCTCCTGCTTATGAAATATTCCCAATCACTGGTCATCTGACCCTTCTTGAGCACTCCTAGACAGTCATGTTTTTAAAATCTTCCTTTATATCAAGTCAAAGAGTACCTCTATACATTTTACCATGGGTGTTAGGAAATCTAGTCACTCTTCCCTGTGATTGCTCTTTTAAGTATTTAAAAATAGCTATCATGTGTTTCCCAAGTCTTTTCTTCTCTAGATTAAATATCATCAATTACTTTAACCATTCTTTTACACGTCATGATTTTTGATCCTTCTGTCACATTGTTGACTTATTAAACATATTTAGCTACTTTATTTCAATTCTCTGTATAGGAGGTATGTAAAATCCAAGCACAGTAATATATCTCATCTTGTGGGATGTTGCAGACTCACAGTGACTGCAATATTGCCTGTTAAGCAAGGATGGACCACCCTCCCACCCCACCCCACCCCCACCACCAAGGAGAACTAGGCAAACAATAGTCTTCAAATGTATGAGTATAACCTGAGGTTTGGTTGTGGGGAGCAGGGCAAGAGTCAGATGACTTCAGGAAGTAGAGAAAAGCACACAGCCAGCTCCTATTGAAGGGAGTGGAGATTAGTTCAGTGCCTTCTTGGAACAAAACCTGCTGGCACTCTAGACTGATTGGCCAAATATCTGGGAAGAACTTTCTGCCTCTTCAGTGGAGAATTTTATGTCAAGAAAATTTCCTTTAAGGGGAAAGGAATCAAGTAGTTCAATTCCTTTCCTGTGCAGAAGAGGAAACAGACCTGGAGGCAACCCAGACCATTAGCAGCAGAGGGACCACAACTCACGTCAGTGCCAAGTATTGCACCATCCTATTGTGCTAGCTCAGATTGTGCCAGTTTGTTTTTGTGACAGTTGGTAGGGAAGTGCTTTCCATTGCAGTGTTGCTTTGCTCATTCTACACAGCAGCCCCTTGGCACTGCATCATGAAATCCCACTTTCAGTGGTAGAAAGATGGGGCCTGGGGACCCATGTCATTGAGGCTGTAGGCTGGTATTGGCAGCCCTGCCCCTGCTGCCCGTTCTGCCCTCATCTCAGCCTCCAAAAGAAAATCAGGAAAATGCTGTCAGCCCTTGCTTGCTTTCTCTCCCATAAACCATTTACTCCCCAGGCCACTCCCCTCCAACCATTCCTCGTCCATGGGTTCCTGTGCGATTCTTCCTTTGTGCCTTTGCTCTTACTAGTCCCTCCTCCTGGAACGTCCTTTTCCACCATCTCCACCTAAGTACTGTTCATTGTTCAAGGTCCCAGCGCAAATTCTAACCTTCACCAAAGGGCTTCCCAGATTTCTCCAGTAAAATCTATCCTCTCCCATGTGTTCCCAAGAGGAAGGAAAGGAGGCTAAAGGAATATATATTGGGCACTTTCAAGAACTTTAACATATTACTTAATTTAACCCTAAAAAGTCAACATTGCCCCAATTTACTTGACAAAGATTCTGAGAGTTTAAGCATTCTGAAGAACGTCATAGAACTGCTGAGTGGTGGTAGTCTGACTTCAAACTACAACTTTCCAATTTGGCACATTTGGTCTCCTATTACATTTACTAGTGTAAATTTACTCTAGCATGGTGTTTTGTGTATAGAAACCTTTAGTTAAAAGTTTGTGATATCAAATTCTCTTGCTTCCTAACTGCATTTCTCCAGTATCTCTTATAGGATTCTCCCTGCCTTAATCATACAGGAATTGTGTAAATGGGGGGCTGGAACTAGTCAGGTAAAGAGCCTGAGTCAGACAAGGCTGCCTCCTGAAGTGTGAGCTCCCTGGGGATAATTAAGCAAAGGGTGCCAGGCTGACATCTGCCAGGGATCTTGCAAAAGTTTCCACTACCCTAGAAAGAATGTTGCAGTATATTCACAAACTGTTACAAATGTTAGAGCTGGAAATGGATTAGGAAATCACCTAATCTATTGGTTTCCAAACACTTGTAGTTG EMBV3_36732 CGAGCAGGAGCCGCTGGAGTAAGGTAATGGACTAAGACAGAAGGTTCCAGTAATAGGTGA Gene BVT0102_226204 - 0 NULL GK000002.2:61856347-61888712 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102503 TCONS_00102500 TCONS_00102501 TCONS_00102502 TCONS_00102505 TCONS_00102504 TCONS_00102506 1 XLOC_061883 Coding TCONS_00102505 XLOC_061883 Coding Coding MCM6 2:61821884-61862259 j TSS76308 8288 1 TCONS_00102505_7 410 0.453426640926641 15 0.795090900084213 5.76047899922431e-07 0.00104359002359294 0.000118772563533239 4.8149524589281e-08 3.66381729028828e-08 0.000398226671447311 1.19606200634423e-08 0.000684205044177535 0.00215143991318052 6.38711533554399e-10 0.000147531956681568 0.000205058764193823 2.83950932621057e-05 0.00132779008024376 0.000326389718724119 0.000965694459772216 0.00109226714071349 0.00236610990944652 1.40911759378972e-05 2.81708706302705e-09 1.92997813825285e-08 0.00087958259135582 0.00106383686470648 0.00171927368763351 2.29080316349024e-07 0 3.56000954671624e-25 0.000354584234884681 0.000253418108700475 0.000180067173785756 NM_001046234.1 MCM6 Bos taurus minichromosome maintenance complex component 6 (MCM6), 0.0 2563 99.65 0.172900579150579 NM_005915.5 MCM6 Homo sapiens minichromosome maintenance complex component 6 (MCM6), 0.0 2122 92.82 0.172900579150579 TCONS_00102505_7 sp|Q2KIZ8|MCM6_BOVIN MCM6_BOVIN DNA replication licensing factor MCM6; 0.0 848 99.51 0.997560975609756 2 coding 0 0 0 0 -0.476350101721439 0.216596962657481 -0.0721585764174033 0.205403267620793 CGCAGAGCGGCAGCGTCGGAGGAGAAGCAACTATAGTGTGGCGCCAGCTGCCCTTCAGCCTTAGGCAGATATGGACCTCGCCGCCGCGGCGGAGCCGGGCGCCGGCAGCCAGCATCTGGAAGTCCGCGACGAGGTAGCCGAGAAGTGCCAGAAACTGTTCCTGGACTTCTTGGAGGAGTTCCAGAACAGCGATGGAGAAATTAAGTACTTGCAGTTAGCTGAGGAGTTAATTCGTCCTGAGAGAAACACATTGGTTGTGAGTTTTGTGGACCTGGAGCAATTTAACCAGCAACTTTCTACCACCATTCAAGAGGAGTTCTATAGAGTTTACCCTTACTTATGTCGAGCCTTGAAAACCTTTGTCAAAGACCGTAAAGAGATCCCTCTTGCCAAGGATTTTTATGTTGCATTTCAAGACCTACCTACCAGACACAAAATTCGAGAGCTCACCTCATCCAGAATTGGTTTGCTTACTCGCATCAGTGGGCAGGTGGTACGGACTCACCCGGTTCACCCAGAGCTTGTGAGCGGAACTTTCCTGTGCCTGGACTGTCAGACAGTGATCAAGGATGTGGAACAGCAGTTCAAATACACACAGCCAAACATCTGTCGAAATCCAGTTTGTGCCAACAGACGGAGATTCCTGCTGGATACGAATAAATCAAGATTTGTTGATTTTCAAAAGGAGCACGTGCAGAAACTGACTCCCGAGTCAGTGGTGTTGATGGATATGAGACAGAAGGTGTTCGAGGTCTCCGGGCCCTTGGTGTTAGAGACCTTTCATACAGGCTGGTCTTTCTTGCCTGCTGTGTTGCACCAACCAACCCAAGGTTTGGAGGAAAAGAGCTCCGAGATGAGGAACAGACAGCTGAGAGCATTAAGAACCAAATGACTGTGAAGGAGTGGGAGAAAGTGTTTGAAATGAGTCAAGATAAAAATCTGTACCACAATCTTTGTACAAGCCTGTTCCCTACTATACATGGTAATGATGAAGTAAAACGGGGTGTCTTGCTGATGCTCTTTGGTGGTGTCCCAAAGACAACAGGGGAAGGGACCTCTCTTCGAGGGGATATAAATGTTTGCATTGTTGGTGACCCAAGTACAGCTAAGAGCCAGTTTCTCAAGCACGTAGAGGAATTCAGTCCCAGAGCTGTCTACACCAGCGGCAAAGCGTCCAGTGCTGCTGGTTTAACCGCTGCTGTTGTGAGAGATGAAGAGTCTCATGAGTTTGTCATTGAGGCTGGAGCCTTGATGCTGGCTGATAATGGTGTATGTTGTATTGATGAATTTGATAAGATGGATGTGCGGGATCAAGTTGCTATTCATGAAGCTATGGAACAGCAAACCATCTCTATCACCAAAGCAGGAGTGAAGGCTACTCTGAATGCCAGGACATCCATTTTGGCAGCAGCAAACCCCATCAGTGGACACTATGACAGATCAAAATCATTGAAACAGAATATAAATTTGTCAGCTCCTATCATGTCGCGATTTGATCTCTTCTTTATACTTGTGGATGAATGTAATGAGGTTACAGATTATGCTATTGCCAGGCGAATAGTAGACTTGCATTCAAGAATTGAGGATTCCATTGATCGTGTGTATTCCCTTGATGAGATCAGGAGGTATCTTCTTTTTGCAAGACAGTTTAAACCCAAGATTTCTAAAGAGTCAGAGGACTTCATTGTGGAACAGTATAAACGCCTCCGCCAGAGGGATGGTTCTGGGGTAACCAAGTCTTCATGGAGGATTACAGTGCGACAGCTTGAGAGCATGATCCGTCTCTCTGAAGCGATGGCTCGGATGCACTGCTGTGATGAGGTTCAGCCTAAACATGTGAAGGAAGCTTTCAGATTACTGAATAAATCAATCATCCGTGTGGAAACACCTGATGTCAATCTCGATCAAGAAGAAGATGCCCAGATGGAGGTTGATGAGGGCCCAGATGGCATCAATGGTCATGCTGATAGCCCTGCTCCTGCGAGTGGAATTAACGGCCACAGTGAAGACATGAACCAAGATTCTGTTCCAAAAGCCTCCTTGAGGCTGGGCTTCTCCGAATACTGCCGAATCTCTAACCTTATTGTGCTTCACCTCAGAAAGATGGAAGAAGAAGATTGAGCTATTGAAAGAAACTGGAGGAACTATGGCCCTCCACCTCGGGCCTGGAGTCTGGATGGAGTTCTGCTAGCCAGAGAAATGCTTCTGGGAGCAATGATTCAGGAAGATTTACGTTGAGGAACAAGAACCAAGTTGATTGTCCTATCCTATATTGTCATATTCCTTTTATACCAACACAGGTTTTATCCCTTTGTTTAGTGTGCTTCTTGTCTAAAAAAAGTTGGATTGCAATAATGTGTTGTTTCTATAACTAAGACCTTGTGTTTTCATGTGTAGAAAAAGGTCTGCTGCTTATATGTTATGTGATATCATATTGGAGAAATAACTTTTTTCAAGTATCAATTACTGCTTTTTTTCACCAGAAAAAACTTTTTCAGCAGTTGTCTGTTAGATTTATTTCTAGTCTACTCAAATTATTGCTTCCATTTATTCATGAATATAGAAAAGGGATGGAAATATGACATTATGGTAAACATTTACACATAACTTCCTCTGAGGAGAGTCCTTATTAGAATTTGATAGTATGAAAGCTAAGAGGCCTTGGAGATGACTTTTAAAAGTTAAATCAAGTTCTATTTGTTTTTTTAAGAGAGTTTATGAAAATAAAAAGTTTATTATACTTTTCCACTACTCTTTAGTAACTTTTAAAATTTCTATGTTCTAAGAGTAAGGTCTCAGAATTATTTTCTGACTGCTTTTTTAAGGGAACTTTGATCATTTTCTATATTATAACCATCCTTAAATTTTTTCAAGGAAAATTATTGCTGCTTATGATACTAACAGTCTCTGAGGCTTTAGCTTTGATCAGTATGTTCATGATGTACTTGTTCCTATTGTTGCAGCTTTTGGCAACAGATGGAAAATGTCGTTTTTCTATATATACAACCACCCTTAAATTTTACAGCATTTTTCTAGGAAAAGAATTACTGCAGTTTATATTAACAGTCTCTGAGGCTTAGCTTTGATCATAGGTTCATGGTGTAGAAGTTACTGTTGTTGCAGCTTTTGACAATAGATGGTATTTGGGGGTCTGTGGGGCTAGTCAGGGAATGTTTATACATGTTACTCAAGTTCTCTAATAGAAACTTCACTCACCACTAAAGATAAGGGAGATTGGAAACAGAGAAGTTGCACAGTTAGCAGATACAGGGTATAAACTTGTGTGAAAACTATGTTACTAATGGGGTAGGCAAGCCTTTTGAGACAAGAAACTTCAGTGTACAGGATCTCAGACTTATTGTTGAGCAGGAGCTGCTGGAGTAAGGCAATGGACTAAGACAGAAGGTTCCAGTAATAGGTGATAGGAAGAACAACTAGTAAAAACTCAGAAAACCGCAAGAAAGAGTTCCTTCCCTGCACCAGTTCCCAACTTGATAAAGAAGATGGGGTAAGGCGTTTCTGAATAGAGAAACAGCCTGACAGGAATTTAAACTTCAGTTTGATCAAAGGAAAGTGTGATGGCCAGGAAAGATGAGTTCCTTAATGGTGAATCTGTCTTCTCCCCCAATTTTGCTATTAGTGAAAGTGGGGACTCTAAAGCAAAGTGAGACAGTTAATAACAACTAAAGTAAGTTTTTATACATCTGAGTAAGTGTGCTTACATTTTCACACATCCCCTCTATCTACATGTTACTTGTCAGAGAAGTGAAGTGGCTAATGGGTGATGGATTATGTATAAGATCTTTATGAAGAAAATTAGACAAGTATTTAGTAAGTGGATAGATGTAAATTGTTTCTGAAAAGGACATCTTGAATATTGTAAATTGTCAACCATAAGTTTAATCTAATTTCAACCAAATCCCAACAGATGTCCATCAGATAGGAAATGACTACATAAATTATGGTAACAGCCATGCTGTCTGCATTATACAAACTAAAATGAGGGAAATGAAGATGTTTGAAATGGAAATATCTCTAGGACGTATGGAAAAGATGTGCAAATAAAGCCATGGAACACCTGAATATATGACACAAATATTAACAAACCTAAGGGAAAATAGACAGCAATACAATAATAGTAGACTTAAGTATCCCAGTTTTCATCAAAGGACATTATCAGTAAGGAAGCATAGACTTCAAGTAGTATGTTTAGACCAGATGAGCTTAACAGGCACAGACTATTCTGTGCAAAAGCAACGGAATACAGATTCCTCTTAAGCATAAATGGAACATTTTTCAGGATAGATCATATGTTAGGCCACAAAACAAATCTTATTAAGTTAAAGATGACTGAAATAGGCATCTTTTCTGACAATAATATAAAACAAAACTACAGGCAGAAACCTCAAGTTCTCACAAATATGTAGGAATTAAGCAACATCCTACTTAACCAATGAGTCAAATCAAAAGAGAAATTTAAAAATGAAACACGAAAATGGAAAAATGACATAGCAAAACTTGATGGGAGGCAGCAAAAGCAATCCAAGAGGGAAGTTCATAGGAATAAATGCCTTTATCAAGAAACAAGGATCTCAGCCTAACTTTATATCTTGGGTGGGGTGGGAAATAGAGCCCAAAGTTGGTAGGAAAGAGCAATAAAACTAAGCTGGTTTTTTTTTCTTTTTAAGGTAAAATTGACAAAACTTATAACTAGACTCACAAAACAAATGGAAGATAAGTTATACCACAGAAATATATAAAGAATCATAAGATGTTGATATTCACCAGCAAATTGGACAACCTAGTAGATAAACTGCTAGAAAAACACTATCAATCATGACAAAAATGGAAAATCTAATTAGTCTGCTTAGTAATGAGATTGAATAAAAAATCAGAAACCTCCCAACAAAGTCCAGGACCATATGGCTTCACTGATGACTTCCACCAAACCTTTAAAGATGAATTAATACCAGTCCTTATCAGTTTCCAAAAATGGAAGAGGAGGTACTATGAAGCCAGCATTACCGTGATACCAAAATGAGACAAGGACACCTAAAGAAGAGAAAATTACAAGCCAATCAATATCCTTGATGTACAAAATAGATGCAAAAAGCCTTAACAAAACATTAGCAACGTTAATTCAATAATATGTTAAAATGATCAAGTGGGATTATTCCAGGTATGCAAGGATGATTCAACATTGCAAATCAAGCAATGTATTATACAGCTTAACAAAATGGATAAAAATCCTTGTCGTCCCCATAGATAAGGAAAAAAGGAATTTGATAAAATTCAACATCGAATTATGATTTTAAAAAACATCATAGTATAGAGGGAAAGTATCAACATAAGATGAAATGGCAAGTCCACAGCTAATCATACTCTTGGGGACGAGGCAAGAATGCCCACTCTGAATATTTTTATTCAATAAATAAAAATAGAGTCCTAGCCAGAACTAGGAAAGAAAGGCATCCAAAGAAGTAAAATTGTCACTATTTGCAGATAATACGATGTTTCATATAGAAAACCCTAAAGACACCACCAAAAAAAATGTCGGGTACTTACTGATGGTCAAGTGGTTAAGAATCTGCCTGCCAGTGTAGGAGATACAGGTTCAGTTCCTGATCAGAGAACTAAAATTCCACATGCTGCAACTTTTGAAGCCCATGTATTCTGGAGCCTGCGTGCCACAAGTAGAAAGTCAATGTACCAGAACAAGAGCTCTGCATGACACTGAAGATCCCACTTGCTACCCCCAAGACCTGATGCAGCCAAGTATTTATTTTTTTATGTATCAGAAAAGAGAATCCCATTTACAGTTGTATAATTAAAAAACACCTAGGAATAAATTTAACCAAGGTAAAAAACCTGTATACTGGAAACTATAAGACAGTGGTGAGAGAAATTGAAGATGATAATGATAAACATTCCATGCATACAGATTGGAAGAATTAATATTGTTAACATGCCCCTTCATTTTAAAATGCCCTTCATTACACATTCAGTGCAGTCTCTCAAAATACCAGTGGCATTTTTCATAGAAACAGACAATCCTACAATTGTGTGGAATCAAAAGATCCTGAATAGCCAAAGCAATATTGAGAAAGAACAAAGCTACAGGCATCATGTGTCCTTACTTCAAGCTATATTACATAGGGTTAGTAAAACTATGGTATTGGTACAGTAAGGAAAGACATTCTCTTAAATGGTGTGGGAAAACTAGATCACTACATTACACTATTCACAGAAGTTAAAAATGGATTTAAAAGTTGAGCATAAAACCTGAAATCATAAACTAGAAGAAAACAGATGGTAGGCTCCTTGACATCAGTCTTGGCAATGGCTTTTTGGATTTGACACTAAAGCAAGGGCAACAAAAGCAAAAATAAATAGGACTACGTCAAACCAAAAATTACTGCACAGCAAGGGAAACCATCAGTCAAATGAAAAGAATGTGAGAAAACTTTTGCAAATAATATCTGGTAGGGGTTAATACCCAAAATACATAAAAACATAATAACAGCAACCTAAAATAGGCCAATGACCAGAATAGGCATTTTTCCAAAGAAGATATTCACATTGCCAACAGGCACATGAAGCGGTGCTCAATATTACTAATCATCATCGAAATGAAAATCAAAGCCACAATGAGATATCAATTACACCTGTTATTAGGAAGGTTATGAAGAAAGTAAGTGTTAGCAAGGATATGAAGAAAATAGAACACTTGTGTACTATTGGTGAGAACCTTTGGAAAACATTGAAGTCCCTCCCCCCCCAAAAAAAAACTAGAACTACCATGTAATCCAACATTCCACTTCTAGTATATATCTGAAGAAAATGAAAACACTAATTCAAAAAGATACATGCACCCTCATGTTCATTGCCACAATATTTACGATAGCCCAGACATGGAAGCAACCTGTGTTCACTGATGGATAAATGGATAAAGAAACTGTGTATAATCAAATATTACTCAGTTCTGAAAAGAAATTCTGTCATTTGTGACATGAGTGAACCTGAAGGGCATTATACTATATGAAATGTCAGAGAAGGAGAAATAGTGTATAATCCAAAGGAAAAAAAAATGTTTTCATAAAAACTGAACTCATAGGTACAAAGAACAGACTGATGAGTGCCAGAGGTGAAGGTGGTCAAAAGGTACAAATTCCAGTTACAAAGTAAATGTCATGGGACTATAATGTACATCATGGTGATTATAGTTACTGCTATCTATCTGAGAGTTGCTGAGAGTTTAAACATTCTCACCACACACAGGAAAAAAATTTGTATATTAGTTATGGATATGTTAACTAGTCTTACTGTGGTGATTTTGTGCAATGCATATGATTGTGTTGTACACCTGAAACAAATACAATGTTATATGTCAGTTGTGTCTTTTTAAAAATTAATTTTTTAGCTTTTCTTATAACTGCAGTAGAAGAGGCTTTTTAAAACTATATCTAGAGAGCAATAAAGAAATCAATGAATTTGACTACACCAAAATTTAATACATTAAAAATTAAAAACCAAAGCTACAGATTTGGAGAAGGTTTTGTCAACCTATAATACTAGAGACAGGATTAATGTCCAGAATAAATAAGCTGCAGATGAGAAGAATATACTATATATGTTTACTATATTATGTATATAATTATATATAATTTCAGTAGCTGTATATTTTCTCGATTTACAATGGTAATAAAGATTATTTCCCAAAATAGATACAGAACTGATACAAATAAATTTTTTAAATCATTCAAAATTATATAAACTAATAATTTGATAGTAGTATAATAGCATTGGTAGGTTTGCTAGGAATTTGATGTTGTAATACACTACTGGTTGGACTATAAATTGGGACACTGCTTTCAAGGAAAAATTTGTTAGTACCATTGGAAGTTAAAATATGGCTGACTACCTTATTACCCAGCAAATGTACTCCAGTATTTTTCCTGAAGAAATACCTGTGTATAGAAAAAGGCATAGACGATGACACCCAATCAACAAAATAATGATGGTGCAGCATCACACAATACAGCCCTTGAATCAGATATATCAGTATTTACACAATGTGAAAAGATCTCCAAGGTGTGCTATATGCTACAAATGCTAGTTGTACATCAATACTCACATTATCAGTTAATTTCAGTTCAGTCGCTCAGTCGTGTCCGACTCTGCGACCCCATGAATTCCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCC EMBV3_19285 ACTCCATTGTACTGAAGTGTATGAGGTCAGGCTGGTGGTGACTGGCGAGAGCAGAGTTAA Gene BVT0101_041501 + 1 EMBV3_26803 GK000005.2:97675031-97754722 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192916 TCONS_00192918 TCONS_00192914 TCONS_00192917 TCONS_00192913 TCONS_00192915 TCONS_00192919 1 XLOC_117310 Coding TCONS_00192915 XLOC_117310 Coding Coding DUSP16 5:97722634-97778284 j TSS144272 1088 1 TCONS_00192915_2 203 0.0551470588235294 5 0.980538733849665 0.00216395197668392 0.00229885985858979 0.000661907422170301 0.000246922734383255 0.00193784572431228 0.000654013218164475 0.00121780179105482 0.00216210327724757 0.00133415356250148 0.000240390338209969 6.30705518060731e-10 1.22878258466345e-17 0.000366259442793883 0.00065035443502636 4.47841890894069e-08 0.00288718882743954 0 0.000311272927512668 0.000503168821507538 0.000412122692479956 0.000288627968870959 3.17794747854367e-08 0.000621829959996031 3.29506409374573e-08 0.00116612897377914 0.00298861153348322 0.000329778205904854 0.00080987419606314 0.000261607074521819 0.00148799660981803 XM_870975.6 DUSP16 PREDICTED: Bos taurus dual specificity phosphatase 16 (DUSP16), 0.0 1819 100.00 0.925551470588235 NM_030640.2 DUSP16 Homo sapiens dual specificity phosphatase 16 (DUSP16), mRNA. 0.0 1353 93.64 0.819852941176471 TCONS_00192915_2 sp|Q9BY84|DUS16_HUMAN DUS16_HUMAN Dual specificity protein phosphatase 16; 3e-121 362 97.75 0.87192118226601 1 coding 1 0 1 1 -0.0979204312687093 0.588131246320836 0.0172793873968438 0.749130877973011 TCAGAACAAGACATGAATAACCCATTTCACAGATGAAGAAACTAAGACCTTAGATTAATTTATCCAAATCCCAAAGCGAGTGGACCTGGAGCAAAGACCTTCTGACTCATTCTCAGGCTTTTCAGCCCCGTGGCAAGCTGTTGGAGCGAGGGAACAGAGGTAAAGAATGATGTAATGCACTGGCCGCCCCAAAGCATCTTTTGTTGGAATGGTTATTCCAGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCTTTGTGGACGGAGGCCTTTGCGAGAACACATCAACGGGAAAGAGAAAGAGACATTCACTTGGAGGGCTCTCGCCGAAAATGGGTTTAACTCTGCTCTCGCCAGTCACCACCAGCCTGACCTCATACACTTCAGTACAATGGAGTGGCTGAGCCTTTGAGCACACCACCATTACATCATCGTGGCAAATTAAAGGAAGAGGTGGGAAAAGAGGACTTATTGTTGTCATGGCCCATGAGATGATTGGAACTCAAATTGTTACTGAGAGGCTGGTGGCTCTGCTGGAAAGTGGAACGGAAAAAGTGCTGCTAATTGATAGCCGGCCATTCGTGGAATACAATACGTCGCACATTTTGGAAGCCATTAATATCAACTGCTCCAAGCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTTAATTACGGAGCTCATCCAGCACTCAGCCAAACATAAGGTCGACCTTGACTGCAGTCAGAAGGTTGTCGTGTATGATCAGAGCTCCCAGGATGTGGCCTCTCTGGCTTCAGACTGTTTTCTCACTGTCCTCCTGGGTAAACTGGAGAAGAGCTTCAGCTCTGTGCACCTGCTCGCAGGTGGGTTTGCCGAGTTCTCCCGCTGTTTCCCTGGCCTCTGTGAAGGAAAGTCCACCCTAGTCCCCACCTGCATCTCTCAGCCTTGCTTACCTGTTGCCAACATCGGGCCAACCCGAATTCTGCCCAATCTCTATCTTGGCTGCCAGCGAGATGTCCTCAACAAGGATCCACCCATTGATGCCTTGAGAGGAAATGAAGACTGGGCTTATGGAAGCTGTGGTAAACAGCTTGAACAAGGTCGT EMBV3_00874 TATCCTGGCTGCCGCCAGCCCGTACATCAGATCCGGCTGAACGAGGACACCATCCAGGAC Variant GeneID:521175|GAN:NM_001099015:47_cdna 315^429 1 EMBV3_37623 GeneID:521175 18 GENE GAN MGC148817 gigaxonin EMBV3_31666 AGGCTCCGGAAATCAACATCTCTGTGAATTAGCTGGAGTAGCAGTATGGAGTTGAGACCC Gene GeneID:509031|SLC4A9:XM_002689241:119_cdna Constitutive 0 NULL GeneID:509031 7 GENE SLC4A9 NULL solute carrier family 4, sodium bicarbonate cotransporter, member 9 EMBV3_25590 AGATCTGCACCTTCTGCCTCAGCAACCAGAGAAAGTTGAGCAAGGACCGGGACAGAAAGA Gene GeneID:615157|SCXB:XM_002692545:166_cdna Constitutive 1 NULL GeneID:615157 14 GENE SCXB NULL similar to scleraxis homolog B EMBV3_37189 GCCTCCCTTTTAAGCCACACCTCTGCCATGTGTATAGGGAGTGAGGCAGCTGAGAAATCT Gene BVT0102_214366 + 0 NULL GK000008.2:77073923-77081576 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13643 AGGCCCCTGATCCTAAGCCATCCCTGGGGGCTCATTCAGCTCTTGCTTCATTGTTTCTAT Gene GeneID:618392|SUN2:NM_001102319:115_cdna Constitutive 0 NULL GeneID:618392 5 GENE SUN2 MGC151713 UNC84B Sad1 and UNC84 domain containing 2 EMBV3_17267 CTCACTGGCATTCCTCTTCCGCTCATAAAGGTGGTGACTCTGTGGTACCGAGCACCGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37184 GAGGAAGGGTTCCCAGTTTCTCTCACTTCTTTTGTTTCCAGCATGCCCTTGGGAAGGAAC Gene GeneID:540641|CCRN4L:NM_001082454:53_cdna Constitutive 0 NULL GeneID:540641 17 GENE CCRN4L NOC CCR4 carbon catabolite repression 4-like (S. cerevisiae) EMBV3_29548 TTGTATTGTGGGGCTTCCCAGGCAGCTCAGTGGTAAAGAATCCGCAGAGTTGAAAGAGAC Gene GeneID:789977|LOC789977:NM_001103310:17_cdna UTR3_Alt 2 NULL GeneID:789977 8 GENE LOC789977 MGC157227 hypothetical LOC789977 EMBV3_37120 GTACTGGATTTCCAGAAAGTGAAACTAAAATTTCAATCCAGGTGCTGGTTTGCCAACTGA Variant GeneID:512584|SNRPA1:NM_001098948:67_cdna 498^577 2 EMBV3_27631 GeneID:512584 21 GENE SNRPA1 MGC165803 small nuclear ribonucleoprotein polypeptide A' EMBV3_07531 CCCACTGACTATAAAAATCTTCCCCAACAGTTTGCCAGACGCGGGCGGGCGTCAGCACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11940 AAGTCGTACCGGCTGCGAGCCCAGCTGTATAAAAAGAAAGTGACCAATCAACTCTTGGGG Gene GeneID:533055|ALMS1:XM_002691212:39_cdna Constitutive 1 NULL GeneID:533055 11 GENE ALMS1 NULL Alstrom syndrome 1 EMBV3_40283 AAGAGTGAGGGACTCAAGAGGCGGTGGACTTTGGTTTTGGGGATTTTAGGAACAAGCTGC Gene BVT0102_142580 + 0 NULL GK000003.2:19067402-19090894 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35571 GCCACCACCAATGCTAGTAGCATCTCCTGTAGGTCCTCCGCTCAAAATCGTTGCTGTTAA Gene GeneID:531486|KRT34:NM_001075951:151_cdna Constitutive 0 NULL GeneID:531486 19 GENE KRT34 HKA1 MGC139887 keratin 34 EMBV3_32394 CTCAGGAGGCACATCAAGTGATCTGGTATTTCCATCTCTAAGAGTTTTCCACAGTTTGCT Gene BVT0102_117689 - 1 EMBV3_39474 GK000011.2:38930063-39881864 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28827 CTTCCATGAACTTCATCACACACAGCTTTGGAAAACTTATTTTTCTGTGAATGTGTGCTC Gene BVT0102_420311 + 0 NULL GK000009.2:74096502-74222881 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11892 GCAGATTCTCCAATTTAGATCCCAGACAGACTGATTCGCCATGTTGCAGTCCCCCAGACA Gene BVV0102_077278 + 1 EMBV3_29162 GK000027.2:5625558-5715232 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00200893 TCONS_00204180 TCONS_00025022 TCONS_00118521 TCONS_00185879 TCONS_00233184 TCONS_00118479 TCONS_00206254 TCONS_00173129 TCONS_00166670 TCONS_00041593 TCONS_00235856 TCONS_00025023 TCONS_00118520 TCONS_00058128 TCONS_00173128 TCONS_00200894 TCONS_00252668 TCONS_00206255 14 XLOC_122544 XLOC_124364 XLOC_014641 XLOC_072652 XLOC_111932 XLOC_142666 XLOC_072637 XLOC_124865 XLOC_104301 XLOC_101506 XLOC_025399 XLOC_144309 XLOC_035925 XLOC_155609 Coding TCONS_00233184 XLOC_142666 Coding Coding - 8:85172131-85174612 - TSS174688 2481 2 TCONS_00233184_3 151 0.780733575171302 1 0 0 0 0 0 1.98999434152439e-06 4.31301344875394e-07 2.56422969758855e-06 0 6.71380077273372e-07 8.8801666666952e-05 3.88443295009467e-05 0.000132294534016694 2.8751935109907e-06 2.46643871295642e-05 2.25468193324039e-05 0.00421391208211377 0.00209932308668206 0.0043783197301723 0 5.79721118306558e-06 1.01965928236973e-07 0.00172424396554993 0.00200976603821132 0.00309294870850137 0 0 5.90401748181516e-07 0.000191769600364311 0.000138520021233263 0.0010634967371462 XR_139745.2 LOC100847679 PREDICTED: Bos taurus uncharacterized LOC100847679 (LOC100847679), 2e-103 381 82.55 0.137041515517936 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 2e-07 62.6 70.00 0.0669085046352277 TCONS_00233184_5 sp|P10266|POK10_HUMAN POK10_HUMAN HERV-K_5q33.3 provirus ancestral Pol protein; 5e-43 154 52.14 0.964539007092199 2 noncoding ATTAATTGGTATGGTTTGATGTGCTGTGATGATATATGCTCTATATACTGTATAATTATATTATATATGTGTGACATGTATTATTACAGTACATTGGTTTGTGTTGGCTGGTATTAGCTGTGTACGTGTTGTATTGCTGTAATATATATTAATTAACATATTAATTATGAAGATTAATTCAAGTATATTATGTCAATAAGTTTATACTTGTTGCCATGTATAAATACATATATAAATACATTTTGCATTTAGATATATTTGTTTACCAAAATGAGATAAGGAGGTTATACATTTATTGTTTAAATTTATACAGAGACCTAAACTAAACATTAGACCTAAATTAACATATCCCAAAATTTATGCTGTTAAAATGTAAATTTTAAAAATTTAAAAAATTAAATTGACAACTGCTTGACAATTCTTTTACCATAAAACCCCCATAGGTGTAATTGGGGTAGCCAGACAAAAAATTGGTTTTATGGCAAAACGGCCCCCTAGAATGGGTCCATCTCCCCGCCCAAGCTAAAAAAATAGTGGCTTCTTATCCAGGATTGATAGCTACGTTGATATTAAAAGGAAAAAAGTGGAGCATTGAATTATTTGGTAAAGAGCCATCAGAAATTGTAATTCCATATAATAAGGAACAACTTGATGCTCTTCTAATGTTTGAAAATTGGCAGATTGCTATAGGAAACTATTTTGGTCAAAATTTTTGCATCATTTACCTTCACATGTTTTGCTAAATTTTATATCCAGACATCCAGTTATTTTTCCTGTCAGATGTAAACAATCTCCTATTCCAAATGCTCAGATAGTTTTTACTGACGGGTCAGCAAATGATAAAGCCTCCATAGTCACTAAAAATCACCAAAAGGTTTTAGAAACACGGGAAACTTCAGCTCAAAGAGCTGAAATAACAGCAGTCATAGAGGCTTTTGCTATGTTTGGAGATGAGGAATTTAACCTTTATTCTGATTCTCAGTATATTGTCAGGTTGTTTCCACACAATGAAACTGCGGTTTTGCCTGAAAATAAAACTACCATATTTCATTTGTTAAGTAATTTACAGCAACAAATTTGGAAAAGAAATAAAATATTTTTCACTGGACACATTCGGGCTCATTCCGGATTGCCCGGCCCTTTAAATGCCTTTAATGATTTGGCTGACTTGTTAACCACAAATACAGTGGCTACTGTGATTGAGGAGGCCAGAGCCTCTCACTTACTTCATCATCAAAATGCTACTGCTTTAAGATATCAATTCCAAATTCCCAGAGAGACTACTCGAGAGATTGTGCGCTCTTGCTTACACTACCCCACTGTTTATAATATAGTCTACCTACGGGAGTTAATTCTCATGGTCTCAAACCTAACATACTCTGGCAAATGGATGTAACTCATATCTCTTCATTTGGAAAACTTTTCTTTGTTCATGTAACTGTAGATACCTTTTCTCATGTCATTATTGCAACTTCTCGTACCGGAGAGGCAGTTAAAGGTGTTATACAACATCTCTTTACTTGTTTTTCATATTTGGGCCTACCAAAAGCTCTGAAAACTGACAATGCTCCTGCTTACACTTCTAAGTCTTTTCAGGAATTTTGTTTACAGTTTCAAATTAAACACAATACAGGCATCCCTTATAATCCCCGGGGACAAGCCATTGTGGAAAGAGCACATCAAACATTAAAGCTTCAAATTCAAAAACTAAAAGAAGGGGAGTTTAAGTATAGTTCTCCCCATCAAATCTTGCAACATGCTCTTTTCGTAATAAATATTTGCTCTTTTCGTAATAAATATTCTAAATACTGACCTGGCTGGAACTACTGCAATGCTTCATCATTGGTGCCTGGAGCAATTGAATGCAAAACCATTAGTTAAATGGAAGGACCTCCTCTCCGGACAATGGAAGGGTCCTGACCCATTATTAACTAGCGGTCGAGGATATGCTTGCATTTTTCCACAGGATGCAGATTCTCCAATTTAGATCCAAGACAGGTTGATTCGCCATGTTGCAGACCCCCAGACATCCAGTTCCCCCATTGCTTCGATCACAAAAGAGGAGCCCGCCGGCAGGGGAGACAAGATAAACATCGAGATTCCGGCGAGACTGACAGGGCTGCTGCAGCGTGAACTCCAACCAGAAAATAATTCTACTTATTCTGTTTTAGCTTGTCCACCCTCGCCTTATGTTTTCCTTTTTACTAATGACTCCAACAAACTTAATGTAGGCATGAATTATTCAGGTGGACCTAACGTAGTGACTTGTGAACAATGTATGCTTTCATCTTATTTAAACCCTCAATGTAATGTTTGCTCCTTTGTAGTGTTACAACGCCCACCCTATCTTATGGTGCCTATATGATAGCTATGGTCTTACTGTGTTACAACAACTGCAGGATTTAATGTGATCGTGATGGTTTGTGGTCTTGCTTATCCTAGGAATATCAGCTTTGATAGCAACAATTATTTCTGTTACTG TCONS_00228509 TCONS_00228510 . 5' 24095 TCONS_00228509 TCONS_00228510 . 5' 24095 EMBV3_26306 CAGAATCTTGTCCAAAGAAGTGAGGACCCATGCCTGTTTCATAGAGCTGATGGTCCAGTG Gene BVV0101_035704 + 0 NULL GK000001.2:96642736-96788669 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001591 TCONS_00001594 TCONS_00001588 TCONS_00001592 TCONS_00001590 TCONS_00001593 1 XLOC_000395 Coding TCONS_00001594 XLOC_000395 Coding Coding PLD1 1:96540508-96678635 j TSS821 5906 1 TCONS_00001594_6 1036 0.0650186251269895 26 0.95743017245124 1.81253363605494e-05 2.95369712062444e-05 1.66564657380747e-07 1.05752690293296e-11 6.67640637928427e-05 0 7.22617302482294e-06 7.30344887856224e-12 0.000145464931943742 0.000137147589267607 1.8722636255407e-06 0 2.27894857917097e-12 5.08782875151964e-05 6.3696271453331e-12 1.01885022610248e-07 0.000288101792915408 1.21763060505627e-10 0 1.29041996233986e-44 4.24736025345614e-12 4.88352361734296e-05 0.000220364735992511 8.81841873867775e-11 6.13672080574736e-12 8.8139492613744e-06 0.0001010331165007 1.33983840745276e-10 1.21647751071242e-05 7.08680225279555e-12 XM_005201679.1 PLD1 PREDICTED: Bos taurus phospholipase D1, phosphatidylcholine-specific (PLD1), transcript variant X3, mRNA. 0.0 1.057e+04 100.00 0.992380629867931 XM_005247534.1 PLD1 PREDICTED: Homo sapiens phospholipase D1, phosphatidylcholine-specific (PLD1), transcript variant X2, mRNA. 0.0 5140 85.59 0.757873349136471 TCONS_00001594_6 sp|Q13393|PLD1_HUMAN PLD1_HUMAN Phospholipase D1; 0.0 1971 88.93 0.999034749034749 4 coding 1 0 1 1 -0.0139517248728795 0.910768280952353 0.00700568490778034 0.896537839108131 CTTAGCCAGGAGGAAGTCAAGATGACTGGTGGCATTAGGAGAAGAGCCCCTTTGCTTTTACTCTGTCTCAAGCCAACATGTCACTGAAAAATGAGCCAAGAGTAAATACCTCTGCACTGCAGAAAATCGCTGCTGACATGAGTAATTTGATAGAAAATCTGGATACGCGAGAGCTCCACTTTGAGGGAGAGGAGGTGGACTGCGATGTGTCTCCCAGCGATCCCAGGACACAGGAAGTGTATATCCCTTTCTCTGCTGTTTATAAGACTCAAGGATTTAAGGAGCCTAATATACAGACGTATCTCTCCGGCTGCCCAATAAAAGTTCAAGTTCTGGAAGTGGAGCGCTTTACATCTACAAAACGGGTACCAAGCATCAATCTTTACACTATTGAATTAACACATGGGGAATTTACATGGCAAGTGAAGAGGAAGTTCAAGCACTTTCAAGAATTTCACAGAGAACTGCTCAAGTACAAAGCCTTTATCCGAATTCCCATTCCCACCAGAAGACACACGTTTAGAAGACAAAATGTCAAAGAAGAGCCTCGAGAGATGCCAGCTTTGCCCCGCACATCTGAAAACATGATCCAACAAGAAGAACAGTTCTTCAGTAGAAGGAAACAGCTGGAAGATTACTTGACAAAGTTACTAAAAATGCCCATGTATAGAAACTATCATGCAACAACAGAATTTCTTGATATAAGCCAGCTGTCTTTCATCCATGATTTGGGACCAAAGGGCATAGAAGGTATGATAATGAAAAGATCCGGAGGACACAGAATACCAGGCCTGAATTGCTGTGGCCAGGGAAGAGCCTGCTATCGGTGGGCAAAAAGGTGGTTGATAGTAAAAGATTCCTTTTTACTGTATATGAAACCAGACAGTGGTGCTATTGCCTTCGTCCTGCTGGTGGATAAAGAATTCAGAGTTAAGGTGGGGAGGAAGGAGACAGAGACGAAGTATGGACTCCGAATTGATAATCTTTCAAGGACTCTGATTTTAAAATGCAACAGCTATAGACATGCTCGGTGGTGGGGAGGGGCTATAGAAGAATTCATCCAGAAGTATGGCCCCGACTTTCTCAGAGATCATCGATTTGGATCATATGCTGCTATCCAAGGGAACACTTTAGCCAAATGGTATGTTAATGCCAAAGGATATTTTGAAGATGTGGCAAATGCAATGGAAGAGGCAAAAGAAGAAATATTTATCACAGACTGGTGGTTGAGTCCAGAAATCTTCCTGAAACGTCCGGTGGTTGAAGGAAATCGTTGGAGGTTGGACTGCATTCTTAAGCGAAAAGCACAACAGGGGGTAAGAATCTTCATTATGCTCTACAAAGAGGTGGAACTTGCCCTTGGGATCAATAGTGAATACAGCAAGAGGACTCTGATGCGTCTACACCCCAACATAAAGGTGATGAGGCACCCGGATCACGTGTCGTCCAGCGTATACCTGTGGGCTCATCATGAGAAACTCGTCATCATCGACCAGTCGGTGGCCTTTGTGGGTGGGATTGACCTGGCTTATGGGAGGTGGGATGACAACGAACACAGACTCACGGATGTGGGCAGCGTGAAGCGCGTCGTCGGGGGACCATCCCTGGGTTCCCTCACAGCTGAAACAACAGAGTCTATGGAATCCTTATGTCTCAGAGATAAAAATGAATCTGATAAAGATCTGCCCATCCTGAACTCTCCTGATGATGCAAATTCAAAACCGAAAGGAAAAAAGCCCAGCAAGTTCTCCAAATTCAGTCTCTACAGGCAGCTGCACAGACACCATCTGCACGACACAGACAGCATCAGCAGCATTGACAGCGCCTCCAACACAGCCTCCCTCCGAAGTGTACAGACACGTGTGGGAGAGCTACATGGGGAAACCCGATTCTGGCATGGAAAGGACTACTGCAATTTCGTCTTCAAAGACTGGGTTCAACTCGATAAACCTTTTGCTGATTTCATTGACAGGCACTCCACCCCCCGGATGCCATGGCATGACATAGCCTCTGCAGTCCACGGGAAGGCAGCTCGCGATGCGGCCCGTCACTTCATCCAGCGCTGGAACTTCACGAAGATTATGAAACCAAAATATCGGTGCCTTTCTTATCCTTTTCTGCTTCCAAAATCTCAAACAACAGCCCACGAGTTGAAATACCAAGTGCCTGGGTCTGTCCATGCTAACGTACAGTTACTCCGCTCTGCTGCTGATTGGTCTGCTGGTATCAAGTACCATGAAGAATCCATCCATGCTGCTTACGTCTATGTGATAGAGAACAGCAAGCACTATATCTATATAGAAAACCAGTTTTTCATAAGCTGCTCTGATGACAGAGTTGTGTTCAACAAGATTGGCGATGCCATTGCTCAGAGGATACTTAAAGCTCACAGGGGAAGCCAGAGATACCGGGTGTATGTTGTGATACCACTTCTGCCAGGTTTTGAAGGAGACATTTCAACCGGCGGAGGAAATGCTCTACAGGCAATAATGCACTTCAACTACAGAACCATGTGCAGAGGAGAAAATTCCATCCTTGGACAATTAAAAGCAGAGATTGGCAATCAGTGGATAAATTATATATCCTTCTGTGGTCTTAGAACACATGCAGAGCTTGAAGGAAACCTAGTCACTGAGCTTATCTATGTCCACAGCAAGTTGCTAATTGCTGATGACAACACTGTTATTATTGGCTCTGCCAACATAAATGACCGAAGCATGCTGGGAAAGCGAGACAGTGAAATGGCTGTCATTGTGCAGGACACGGAGACAGTCCCTTCGGTAATGGATGGAAAAGAGTACCAAGCTGGTCGATTTGCCCAAGGACTTCGGCTTCAATGCTTTCGGGTTGTTCTCGGCTATCTTTCTGACCCGAGTGAAGACATTCAGGATCCAGTGAGTGATAAATTCTTCAAGGAGGTGTGGGTTTCAACAGCAGCTCGAAATGCTACAATTTATGATAAGGTGTTCCGGTGCCTTCCCAATGATGAAGTACACAATTTAATTCAGCTGAGAGACTTTATAAGCAAGCCCATATTAGCAAAGGAGGATCCCATTAGAGCTGAGGAAGAACTGAAAAAGATCCGTGGGTTCTTGGTGCAATTCCCCTTTTATTTCTTGTCTGAAGAAAACCTACTGCCTTCTGTTGGAACCAAGGAAGCCATGGTGCCCATGGAGGTTTGGACTTAAGCATTATACTTGTTTGCAGCTCAGAGACTTCCACTCTGAAGAGTACACGTCACATTCTGACTTTCTGGAGACCTAACAGACAAAGCCAGACCCACAGCACACATCCACCCCTTGGACTGCAACACTTCGGGTTGACTTGGAAGGGCTACAGTCACACTGATGTAAGAGCGATGAACATCCGCATGGCCTTATAATTCCTCGTGCCTCTCCTTGTGAAAAAGGGACTGCGTTCTTAGGTAGCATATACCCAACAGCATCAACACATATTTCAATTCTGTGGTGTATATCAAAGTGCATTTTCTTTGCTAACAAGAATTTATCTGTAACTGATCTACATTGCCAAAAGTTGTCTGAACCTCCTTAGTCTCCTCTGACCCTCACACATGCAGCTGTTGTTTGCTGGACCTGCCTTCATCTTGTAATCCATACAGGCTCTGTTTTACAGAGTTTTTATTGCTAGAAGATGTTGTGATGCTGCTCTGAGATTCTTGAAGGTTCCATGGGATGCTCTGCCCATCTGGTCCTGGAGTCGTGGTGTGCACCCAACCAAGGATGTGGTCCTTCTTCCTTTCCAGTGACTGAAAGGGAGGACAGACCTTAATCTATACAGCAGCCCATGTTAGGTACTTTTGATAATATTGACAGTATGTATCTTGACATGACAGAGCAACAGGAAGGAATTAAATTTGGTTATTACAGCAGAGATTTCACTTTACCTCCAAAGCCACTGACAAGATGTATTCTTATGATAGGGCTCACCGGATCAGATTTGAAAACATGTGTAGGATATTGGATTACACAGCAACCCATAAAACTCGAAGACAGAGCATACAGCCTTCAGAAATCACCAACATGTTGGTGGGAATCAGATTCAGATAAGGAAAGAACATTTCTTACAGTCCTGTAAAATTTCCTGCCATCCTTAGCTGCTGGATTGATTGAAATTGGAGTTTCTACATTTCAAAATAAAACCAGCAAATACAACTTGTCTTTCAAGAGAATCAGGGGCTTCATAACTCATGCCAAGTGAATGAGTATGAGCCCAGCCTTATTTGACATTCAGCTCTCTAGCTATGCTACCTTCTAGAAGAAAAATTGATTGTAAAATACATGTACCATCTCTTGTATTACTAAATAAGCATTAACATTCCACTAGAGTTCCAAAGAGGTTAGGATTATTTATTAATTCACACTATCCTCATTTGTGAATTGTTCAGGAAATCCATTTCTCTTTTTTGGGTGTTAACATACCCTTTGATACCCCATAGCTCTAGTTTTATTAAGCAGAACCACTCTTACAACTTGAAGAACTAATGTGGGTTCCCAACAGGCCATAAAGTATGGTATAGATGGTGCTTCCCTGGTGACTCAGACAGTAAAGAATCTGCCTGCAATGCGTGAGAGCTGGGTTCCATGCCTGGGTCAGGAAGATCCACTAGAGAAGGGGATGGCAGCCCACTCCAGTGTTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCAGACTATAGTCCACAGGGTCGCAAAGAGTAGGACACGACGGAGCGACTAACACTTTCACTTTCACACTTACACTGGGTGCAATAATTACACCTTTATGGGTTACCCAGACAGAATCTTGTCCAAAGAAGTGAGGACCCATGCCTGTTTCATAGAGCTGATGGTCCAGTGGAGAAGATTAAATAGGAACATAAAGCCAGTGAAACAGCATAGTCAGTTAGCAGGAAAGAGACAGTGTTACATACCCACAAGAGAGTTTTACAAATGAGGTGAGACTGTGTAACCAACAATGGAAATTAATATGCTTTTATGGTGGCCGGAGATGAAAAAATGGCTTCATTCTATAGCCATCACAAGTAAGACGTTTGCTATTTATGAAGTTTAGATTGGCATTTAAAGTGTTGAGTGTATGTGGAATACCTAAGGATTTCTTATATTTTCTTTTTAAACGTTCTTTTAATTGTAGAAGAGTCAAAAGACTGGCTCTTGAAAGGGCCCTTTCTCTTAAAAAAAAAAAAAAAAGCACATAACACAACCTCTCCCCATTTTATAGCTGAGGAAACTGTTAGCTGATGGACCCTTGTTAGTTATGGACTAACAACCCTTGTTATTTGATGGACTCACTGAAGTTCACCCATTAGGACTAATGACATTGTTGCAGTCCACTGCTGGCCTCTCCTTTCACTCATCACTGCCCCACAATGAGGAGATGCAATAAATAGATTTCAGAAAGGATGTCTCTAAGCTATTTTGAACCCTGTGATCTTATGGACTTATGCGCTTGTCCATCTCCCTCAACTGGAATGGAAGCTCCATGGGGCAGGGACTTTCCTGTGTTTTATTCATATTGTTATCTCCAGAGCTTGAAACAGAGCCTGGTTCATAGGAGGTGCTCAGTACACGTTTGTTGGATGAATAAAGGAGATGAAGGAGAGAGCTAATGAAACGAAAACCTTATGGAGTCTCAGACAAGAAATCTTCCTGCTATTGCTAAAGAAACTGTTAGCAAGGTTCTTTTCTACTCAATCTTCTCAAAGGCAAGATGTTTATCTGCAAAGAGAAGGGCTACAAGATTTATTTGGGTAGATTTTATGGGAAATTCAGGGCCATAGTTCCTTGCTTTGCAGTGGCAGTTTACATAGCGCACCTTTCTGTAAAAATTGCATGGGCTGTGGACACAAGATGCATGACCTAATTACCCATCATTCTCTGGCAC EMBV3_04756 CCTTGCATATTCATCTACGTGTGGCCCTTTACCAGCTACCCTGTGGATAAAGTTCTTGCC Gene GeneID:516054|LOC516054:XM_002690685:290_cdna Constitutive 0 NULL GeneID:516054 10 GENE LOC516054 NULL similar to Olfactory receptor 4K5 (Olfactory receptor OR14-16) EMBV3_22410 CTGTTACGCTGTCTCAAAACTGAGCTGGATTGAGAGAAAAATGGCTGCTACTCTGTTTGG Gene GeneID:506362|FAM82A1:NM_001040508:56_cdna Constitutive 0 NULL GeneID:506362 11 GENE FAM82A1 FAM82A MGC133951 family with sequence similarity 82, member A EMBV3_25638 CTAAAACCCAGAATTTGGACTGATAGTTTGAATTACTTATGCCTAACATTGAAGGGCACG Gene GeneID:514039|EPCAM:NM_001035290:104_cdna Constitutive 1 NULL GeneID:514039 11 GENE EPCAM MGC127627 TACSTD1 epithelial cell adhesion molecule EMBV3_25974 GCAGTGATATTCATTACCAGACGTGGCCTTAAAGTCTGTGCTGATCCCCACGTTGACTGG Gene GeneID:100295210|LOC100295210:XM_002694010:130_cdna Constitutive 0 NULL GeneID:100295210 16 GENE LOC100295210 NULL similar to chemokine (C motif) ligand 1 EMBV3_03694 ACTGGGCAAGTTCTAGGCAAACTGGGACAGGTTGGTAACCTATATTTGGATTAAGGCTAC Gene BVT0102_279810 + 0 NULL GK000005.2:35510916-35657328 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29439 TTCAACCCTCGCACGTCCACCACCTTCAAGCTCCTGAACAACATCATCGACCTCATCTAT Gene GeneID:613739|LOC613739:XM_002699259:4_cdna Constitutive 0 NULL GeneID:613739 29 GENE LOC613739 NULL similar to pregnancy-associated glycoprotein 10 EMBV3_33300 AGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTC Gene BVV0102_298759 + 0 NULL GK000020.2:34427077-34783692 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00037838 TCONS_00158159 TCONS_00054120 TCONS_00192189 TCONS_00192190 TCONS_00034471 TCONS_00192192 TCONS_00251840 TCONS_00192191 7 XLOC_006328 XLOC_021667 XLOC_096613 XLOC_031929 XLOC_117131 XLOC_020687 XLOC_154781 Coding TCONS_00034471 XLOC_020687 NonCoding NonCoding - 12:6362392-6594115 - TSS25459 5215 7 TCONS_00034471_4 52 0.588111217641419 2 0.977503215059425 2.26082622709667e-06 2.60123365239273e-06 2.07024286962828e-06 3.1201732678072e-06 2.76128093904508e-07 1.2471188088771e-07 0 2.57612421506885e-06 1.23200685864451e-06 0.000255336613279311 0.000319118746224693 0.000179700945110211 5.4069114415067e-05 0.000139000011226776 0.000217306892620334 0.0158822302203882 0.00410586999743098 0.0103852897486628 1.7176485054445e-06 4.0042957095143e-06 2.22261981269553e-07 0.00590781676663635 0.00498263827401132 0.00812084704310067 3.06011928141315e-07 2.87146991636955e-06 6.46440450356567e-07 0.000813313980215989 0.000589741536196689 0.00235167555301425 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 6e-114 417 92.66 0.0546500479386385 0 noncoding 1 1 1 1 -0.0931633037695017 0.520250820034241 0.00875049430459632 0.853150459251676 GGCCAGAGTGAGGTACTCCGCCCATGGCAAAGGTCATGAGGAAGGAGGCTCGACATACGCAAAGGCGGGATCGAGCCTCAGGAGTCCCCCTGGAACTCCTCGAGCATCTACCCCCATAACCAGAGCCTGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACCACCTCTTTTGGAGAAGGAGTTAACTTAGAGCTCCAGTTTATAATAATTCCTGGGCGTGATAAGAGTGTTTTAACCTACAAACTCCTCTGAAGGTTCTCTAGCCTGCCTGATAGGCTCGTCCGGCCACATGTGATTGCTCACAGCCTCCCAACCGTGAGAGGCACAAGATGCTTTAAACCCTCTAAAAACGGGTTCTTTAGAGAAGTTAGAAAACTATTAGTATAAGTATAACGGGCTGATTAGAAATTGTATTGGTGAAGGGTTTTTCATTTGTTGAGCCAATGTTTGTTGCTAAGTCTCCATATCCCCTGCCCTTACACACATTAATGAATATATAGAAGGAATAAGTATTAACCTTTGATATTAATCACGTTAGACCTTAGGCTAAGTAAATTCTTTCCTTAGCTAAAACCCACCACACCCTCACCCTGTAGGAATGTAACTTTACTTGGGTGGCGTCTGTTTTGAGAATAATCAGCCCTGGAGAAATAAGTGTCCTGATTGACTGACCGCTGTCACAAGGAGAGGGTCGTAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTGTGAAGCACCTGACTTTAATAAAAGTCAGGACTGCTGTCCCCACGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTTCTCGAAATACTGGTCTCCCCATGTCGCGCTCTCTCTCACTCTGGTTGAGTCTCCATCTGGAGCGCGGAACCCACCATGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAACGGAAGGACGCCTGCGGCCTACGTAAGTGGTGCAAACTTCTTGTCTTGAAGTTTTATTGGTCTCCCGCGTAAACCAAGCTACTCAGCCTCTTTTCTCCACTGAATTTTCCTACTGAGCTATCCTTATTCTATTACTCTTTATATCTTTAATTAATACCTAATTGAAGCTATTGTATCCTGATCCTCGCCGACGCCGTCTCTCCTTCGAGTACCCTGGATCAGCCGGGGCTGGTCCCCGGCAGGTGGCGCCCGAACAGGGACTTCGAAGGTAAGCTCCCCAAAGCAATCAGAGCCATCAGCTCTATTGCTCCCCGTTCTCGGAACAACTGGGTCAGCAGCCCTCTTGTTCCCCCACGGAGCAGTTTGGGTCACCAGCCCTACTGCTCCTCCCTTGGAACAGTTTGGGCCATCAGCCTACTGTTCCTCCCCCGGAACAATCTGGGCCATCAGCCCTATTGTTCTTCCAATGTTCGGGACGGCTAGGACCCCACTTGAGGGTGCCGCGGACCCCCCTGTAGGATAGACAGGGCGAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTCGAGTTAGAGAGAAAAAATGGTTTCTGAAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTGAAAGCTAAAAGCTTTATCTTCTATTATGTTTAACTTTCTGACATGGATAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGTGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGATCCTCGTCATGAGGCTGTGGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAGAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGACGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACCTCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAAGAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTACTCCTTGCAGAAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAAAAATAAAAAGAAAAAAGAAAAAAGTGAAAAAGAAAAAAGGAAAGAATATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGAACGGAGGATGAAGAAATCAGGGAATGCAGCAAGATAGAAAAAGGAAAAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGCAAACGGAGGCGGCAGCTATCGCCCCAAATCAGAAAGTGGTGGATAAGATTTTTTTAAGTTTGTGCAGAGGGGGAGGTAGCTCGCCAGGGCGTCTGGCCACAGTGTCCTGTAAGTCCTCTCCTCTCCTCTGCTGATTTTTTTCTTACTTCTTCTCTTTAAATCTTTCTCAAGTTTTCTTTCCCTCACTCTATCTTTTTTCCTTCCTCTTCTCTTCTCTTTTACTTTCTATCATTTCCTTTTTGTTTCCCTCTTTCATTCTCCCTTCTTCCTTCTTACTACCTTCTCTTTCTTTCGTTTCTTTTCCTTTACCCTCTTTCTCTCTAACTTTTTCTTTCCTCCTCCTTCTCTTTCTCTCTGTGTCTCTTTTTCTAACTTCCTTTTTTCCTTTTTCTATCTTGCTGCATTCCCTGATTTCTTCCTCCTCCGTTCCTCTCTCCTTTTCACTCTTTAGTTCTTTTTCTATCTTTAGATCTTTCTCTATATTCTTTCCTTTTTTCTTTTTCACTTTTTCCTTTTTTCTTTTTATTTTTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTGGGTGAAGCCCCCCTGAGGGGGTTTTTCTGCAAGGAGTAGGCTCTGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGACTTTGGATGTAAACTGGGGAATTTTTAGGCCCTGGGAGGTGCAAGCGGAGGTGGAGTAGTCGCCTTAAATCAGAAATTGTTGGATAAATTTTTAAAGGTTTGTGTAGAGGGAGAGGGGGCTCGCCAGGGCGCCCGGCCGCAGCGTCCTGTAAGCCCTCTCACTCCTCGGGAGGTAGAGCACAGTCTCCCTCCTTTTCTTCTTCAATGGCAGAAAATATGATCTGCGCAGAAGGTGGAGACCCACTACCATCCACCGCTATAGCCTCTCCCATAGGTCATCCCACAGCCTCATGATGAGGGTCCAGAACATTTTAATCATATTTATAGGATAAGTGTTTAGTTGTTTTTTCACCTTCACCCAAATATCTAAATTAACAGTAGCCTCTTTAACAGTTTCAGATTACTTGTATAAAGAGTTGCCATTCTTAGTTTCAGTGTTATCCATGTCAGAAAGTTAAGTATAGTAAAAGATTTTGCTTTAAGCTATCAAAAGATCAGGCTTTTCTTTGGCCTTTTAACTTCAGAAACCGTTTTTTCTAACTCTAACTCTTTAACACTTTCAACACTTCCCACTCCTCTCGCCCTGTCTATCCTACAGGGGGGTCCGCGGCACCCTCGAGTGGGGTCCTAGCCGTCCCGAACATTGGAAGAACAATAGGGCTGATGGCCCAGATTGTTCCGGGGGGAGGAACAGTAGGCTGATGGCTCAAACTGTTCCGAGGGAGGAGCAGTAGGGCTGGTGACCCAAACTGCTCCGTGGGGGAACAAGAGGGCTGCTGACCCAGTTGTTCCGAGAACGGGGAGCAATAGAGCTGATGGCTCTGATTGCTTTGGGGAGCTTACCTTCGAAAGTCCCTGTTCGGGCGCCACCTGCCGGGGACCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACGGCATAGGCGAGGATCAGGATACGATAGCTTCAATTAGGTATTAATTAAAGATATAAAGAGTAATAGAATAAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCCGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCGTTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGGTCGGATCTTAGAAGCCCAGGCATAATTAGTAAGCATGGTGGGTTCCGCGCTCCAGATGGAGACTCAACCAGAGTGAGAGAGAGAGCGACATGGGGAGACCAGTATTTCGAGAAACTGATCCCAATTCTTTATTTTCCAGAGTCTGTTTTTATACACTGAGATGTTATACAAAAGTCACGTGGGGACAGCAGTCCTGACTTTTATTAAAGTCAGGTGCTTCACACAAATGTATACAGAGGTCTTAGGGGTGTTACATCATCTTCTGGCCAGGGGGGCCTGCTGACAATTTACGACCCTCTCCTTGTGACAGCGGTCAGTCAATCAGGACACTTATTTCTCCAGGGCTGATTATTCTCAAAACAGACGCCACCCAAGTAAAGTTACACTCCTACAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAGCCTAAGGTCTAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTG TCONS_00036102 r 5' 1161243 TCONS_00036102 r 5' 1161243 EMBV3_02096 AGTTCTTTGGTTTGACAAGCATTATTAGTGACAAAGACAGAAAAGACTTACCAGCCATGC Gene GeneID:540735|ZC3H13:XM_002691780:382_cdna Constitutive 2 NULL GeneID:540735 12 GENE ZC3H13 NULL zinc finger CCCH-type containing 13 EMBV3_41147 AACACTCAAAGGAAAAAATTCTACCACCCAGGGCTGAAAAAGAACTGGGAAGAGGTGCAT Variant GeneID:516469|ENKUR:XM_002692094:293_cdna 318^688 1 EMBV3_43591 GeneID:516469 13 GENE ENKUR NULL enkurin, TRPC channel interacting protein EMBV3_27734 CAGCTGTGTGGTGGATGAGGAGCAGGATGTGGAGCGACACTTTTCTCTTGGCGAATTGAA Gene GeneID:100140639|RAD54L:NM_001130766:5_cdna Constitutive 0 NULL GeneID:100140639 3 GENE RAD54L NULL RAD54-like (S. cerevisiae) EMBV3_36076 GTATGGCGCTGCAGGGACCGGCTCCGGGGTCCGAACTGACCGGGAGACCAAAGTGACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31926 CTACCTTCTCTCCCCACTTCTAACTAAGAAAAGTTGTACTGAAAGTCTTTAAAAATTCTT Gene GeneID:536863|MPDZ:XM_002689585:17_cdna Constitutive 2 NULL GeneID:536863 8 GENE MPDZ NULL multiple PDZ domain protein EMBV3_23861 ACTGTAATCACGTAATTCATGGGATGTTGTAAGGACACAGGAGGAGCACTTAGCCCACTC Gene BVV0102_233256 + 0 NULL GK000015.2:78580931-78588656 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26079 ATCTGCAAAGTGGAACATGAGAGCTTCCAGGAGCCCAAACTGCTGCCAGTGATTCTCTCT Gene GeneID:505580|PVRL2:NM_001075210:130_cdna Constitutive 0 NULL GeneID:505580 18 GENE PVRL2 MGC140511 prr2 poliovirus receptor-related 2 (herpesvirus entry mediator B) EMBV3_16318 CAGGAGTAGGGATCTGTGGCATCCTTCACTGGCACCTACCGTAAGAATTATAAATTGCCC Gene BVV0102_206370 + 0 NULL GK000011.2:64915364-65447999 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43329 ATGTGCTCTACTCAAGCTGGTAAAAAGGCTCTGGCCACATGTTCCTCCCACCTGACAGCT Gene GeneID:508420|LOC508420:XM_002689062:50_cdna Constitutive 0 NULL GeneID:508420 7 GENE LOC508420 NULL similar to olfactory receptor, family 2, subfamily V, member 2 EMBV3_07767 AGGCTGCCGCAAGAAGTTTATTCAGTCAAACAACATGAAAGCCCACCTCCTGACTCATGG Gene GeneID:100138651|LOC100138651:XR_084659:120_cdna Constitutive 0 NULL GeneID:100138651 27 PSEUDO LOC100138651 NULL similar to zinc finger protein 42 EMBV3_15293 GGCAGGAGCCATGTCTACTACAGCAAAAACAATGCAGGCAGTAAACAAGAAGATGGATCC Gene GeneID:615954|CHMP2B:NM_001035472:102_cdna UTR3_Alt 2 NULL GeneID:615954 1 GENE CHMP2B MGC128858 chromatin modifying protein 2B EMBV3_39476 CATTTGTCTGAAGAAGATGTATGAACGGCCAATAAGCACACCGAGAGATGCTGAACACCA Gene GeneID:100337035|LOC100337035:XM_002694229:152_cdna UTR3_Alt 2 NULL GeneID:100337035 16 GENE LOC100337035 NULL complement factor H-related 4-like EMBV3_39189 CCTTCTGCTTCTGTTAGGTCAATACCATTTCTGTCCTTTATCGAGCCTATCTTTGCATGA Gene BVT0102_194691 - 1 EMBV3_25202 GK000022.2:47476949-47582814 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234417 TCONS_00250480 TCONS_00250661 TCONS_00116077 TCONS_00201862 TCONS_00040258 TCONS_00116379 TCONS_00106693 TCONS_00152742 TCONS_00018793 TCONS_00108328 TCONS_00100947 TCONS_00233719 TCONS_00153688 TCONS_00023656 TCONS_00238391 TCONS_00200892 TCONS_00024385 TCONS_00007111 TCONS_00056175 TCONS_00111173 TCONS_00083606 TCONS_00126150 TCONS_00154504 TCONS_00178271 TCONS_00253634 TCONS_00126154 TCONS_00136813 TCONS_00166912 TCONS_00240510 TCONS_00092521 TCONS_00249246 TCONS_00091757 TCONS_00185766 TCONS_00032664 TCONS_00006512 TCONS_00115943 TCONS_00221089 TCONS_00066161 TCONS_00137172 TCONS_00062027 TCONS_00252122 TCONS_00124548 TCONS_00098597 TCONS_00252752 TCONS_00036444 TCONS_00187602 TCONS_00062030 TCONS_00010927 TCONS_00229688 TCONS_00249379 TCONS_00250280 TCONS_00244460 TCONS_00254634 TCONS_00175514 TCONS_00107605 TCONS_00238588 TCONS_00113358 TCONS_00126142 TCONS_00250579 TCONS_00036446 TCONS_00250850 TCONS_00110195 TCONS_00032866 TCONS_00010356 TCONS_00239779 TCONS_00187595 TCONS_00124176 TCONS_00243251 TCONS_00222162 TCONS_00200394 TCONS_00241894 TCONS_00250571 TCONS_00008657 TCONS_00189290 TCONS_00087258 TCONS_00187671 TCONS_00229705 TCONS_00007349 TCONS_00231696 TCONS_00039655 TCONS_00150799 TCONS_00238606 TCONS_00209026 TCONS_00232919 TCONS_00066197 TCONS_00200112 TCONS_00113357 TCONS_00214490 TCONS_00064192 TCONS_00122914 TCONS_00153235 TCONS_00010310 TCONS_00085919 TCONS_00162467 TCONS_00241999 TCONS_00208876 TCONS_00251406 TCONS_00221465 TCONS_00058292 TCONS_00219647 TCONS_00007370 TCONS_00252476 TCONS_00124995 TCONS_00223798 TCONS_00083608 TCONS_00201448 TCONS_00078558 TCONS_00161572 TCONS_00065498 TCONS_00031163 TCONS_00033459 TCONS_00241119 TCONS_00049685 TCONS_00200828 TCONS_00122398 TCONS_00233399 TCONS_00009542 TCONS_00254309 TCONS_00007020 TCONS_00086569 TCONS_00007216 TCONS_00023641 TCONS_00047084 TCONS_00250957 TCONS_00011422 TCONS_00167608 TCONS_00253911 TCONS_00219730 TCONS_00056221 TCONS_00179794 TCONS_00062760 TCONS_00190588 TCONS_00122851 TCONS_00181195 TCONS_00009850 TCONS_00116149 TCONS_00064985 TCONS_00164536 TCONS_00251526 TCONS_00040190 TCONS_00123292 TCONS_00066155 TCONS_00130324 TCONS_00129697 TCONS_00065417 TCONS_00030069 TCONS_00156592 TCONS_00098636 TCONS_00063196 TCONS_00023496 TCONS_00142407 TCONS_00162598 TCONS_00199862 TCONS_00085918 TCONS_00062028 TCONS_00186084 TCONS_00224145 TCONS_00106695 TCONS_00197922 TCONS_00113356 TCONS_00220658 TCONS_00130473 TCONS_00104257 TCONS_00175916 TCONS_00074591 TCONS_00190612 TCONS_00059941 TCONS_00249145 TCONS_00109794 TCONS_00126464 TCONS_00092508 TCONS_00073726 TCONS_00089829 TCONS_00198653 TCONS_00022792 TCONS_00142520 TCONS_00064113 TCONS_00203184 TCONS_00220539 TCONS_00168027 TCONS_00089257 TCONS_00025022 TCONS_00042304 TCONS_00175559 TCONS_00090615 TCONS_00201403 TCONS_00142948 TCONS_00112804 TCONS_00083607 TCONS_00249985 TCONS_00020420 TCONS_00147942 TCONS_00010560 TCONS_00207738 TCONS_00152912 TCONS_00161765 TCONS_00010268 TCONS_00123385 TCONS_00143295 TCONS_00249932 TCONS_00108980 TCONS_00234231 TCONS_00185968 TCONS_00180455 TCONS_00179090 TCONS_00008259 TCONS_00037665 TCONS_00040431 TCONS_00089421 TCONS_00131305 TCONS_00160911 TCONS_00062029 TCONS_00038827 TCONS_00021272 TCONS_00064146 TCONS_00218815 TCONS_00059948 TCONS_00111181 TCONS_00019139 TCONS_00091653 TCONS_00090860 TCONS_00113350 TCONS_00141269 TCONS_00197537 TCONS_00126459 TCONS_00240081 TCONS_00221284 TCONS_00126153 TCONS_00250005 TCONS_00021121 TCONS_00131659 TCONS_00238392 TCONS_00113354 TCONS_00019026 TCONS_00233195 TCONS_00253150 TCONS_00248101 TCONS_00047669 TCONS_00036445 TCONS_00232964 TCONS_00164538 TCONS_00110370 TCONS_00078985 TCONS_00030353 TCONS_00228679 TCONS_00039511 TCONS_00250423 TCONS_00238701 TCONS_00025023 TCONS_00219120 TCONS_00091579 TCONS_00113359 TCONS_00126148 TCONS_00161889 TCONS_00071191 TCONS_00066230 TCONS_00113348 TCONS_00106694 TCONS_00098252 TCONS_00177337 TCONS_00087257 TCONS_00251149 TCONS_00030952 TCONS_00248828 TCONS_00168038 TCONS_00231913 TCONS_00107057 TCONS_00007010 TCONS_00110304 244 XLOC_143895 XLOC_153423 XLOC_153604 XLOC_070246 XLOC_123507 XLOC_024074 XLOC_070546 XLOC_062871 XLOC_092507 XLOC_009475 XLOC_064236 XLOC_061189 XLOC_143200 XLOC_093450 XLOC_014323 XLOC_145058 XLOC_122543 XLOC_014494 XLOC_002673 XLOC_033978 XLOC_067073 XLOC_051305 XLOC_077380 XLOC_094264 XLOC_108044 XLOC_156573 XLOC_083024 XLOC_101748 XLOC_147174 XLOC_056910 XLOC_152189 XLOC_056529 XLOC_111819 XLOC_018904 XLOC_002075 XLOC_070112 XLOC_134405 XLOC_040878 XLOC_083382 XLOC_037194 XLOC_155063 XLOC_076094 XLOC_058842 XLOC_155693 XLOC_021155 XLOC_113647 XLOC_006478 XLOC_139182 XLOC_152322 XLOC_153223 XLOC_150465 XLOC_157566 XLOC_105295 XLOC_063515 XLOC_145255 XLOC_069014 XLOC_153522 XLOC_153793 XLOC_066099 XLOC_019102 XLOC_005907 XLOC_146444 XLOC_113640 XLOC_075728 XLOC_149914 XLOC_135471 XLOC_122046 XLOC_148558 XLOC_153514 XLOC_004214 XLOC_115329 XLOC_052422 XLOC_113716 XLOC_139199 XLOC_002910 XLOC_141184 XLOC_023472 XLOC_091954 XLOC_145273 XLOC_127537 XLOC_142401 XLOC_040914 XLOC_121764 XLOC_130693 XLOC_038917 XLOC_074468 XLOC_093000 XLOC_005861 XLOC_051996 XLOC_099348 XLOC_148663 XLOC_127388 XLOC_154347 XLOC_134779 XLOC_036059 XLOC_132966 XLOC_002931 XLOC_155417 XLOC_076538 XLOC_137097 XLOC_123094 XLOC_047446 XLOC_098460 XLOC_040217 XLOC_017412 XLOC_019692 XLOC_147783 XLOC_029816 XLOC_122479 XLOC_073953 XLOC_142881 XLOC_005096 XLOC_157243 XLOC_002582 XLOC_052184 XLOC_002778 XLOC_014308 XLOC_027220 XLOC_153900 XLOC_006973 XLOC_102444 XLOC_156849 XLOC_133049 XLOC_034024 XLOC_109564 XLOC_037487 XLOC_116623 XLOC_074405 XLOC_110562 XLOC_005403 XLOC_070318 XLOC_039709 XLOC_100254 XLOC_154467 XLOC_024007 XLOC_074846 XLOC_040872 XLOC_079033 XLOC_078410 XLOC_040136 XLOC_016324 XLOC_095053 XLOC_058881 XLOC_037923 XLOC_014163 XLOC_086832 XLOC_099479 XLOC_121514 XLOC_112137 XLOC_137441 XLOC_119583 XLOC_133975 XLOC_079182 XLOC_062333 XLOC_105695 XLOC_046345 XLOC_116647 XLOC_036542 XLOC_152088 XLOC_065698 XLOC_077438 XLOC_045488 XLOC_054611 XLOC_120307 XLOC_013462 XLOC_086945 XLOC_038839 XLOC_124124 XLOC_133856 XLOC_102863 XLOC_054042 XLOC_014641 XLOC_025637 XLOC_105340 XLOC_055395 XLOC_123049 XLOC_087373 XLOC_068699 XLOC_152928 XLOC_011097 XLOC_089827 XLOC_006111 XLOC_126253 XLOC_092677 XLOC_098652 XLOC_005819 XLOC_074939 XLOC_087717 XLOC_152875 XLOC_064885 XLOC_143710 XLOC_112021 XLOC_110222 XLOC_108863 XLOC_003817 XLOC_021495 XLOC_024247 XLOC_054206 XLOC_080010 XLOC_097804 XLOC_022648 XLOC_011945 XLOC_038872 XLOC_132134 XLOC_067081 XLOC_009819 XLOC_056426 XLOC_055638 XLOC_085697 XLOC_119198 XLOC_146746 XLOC_134600 XLOC_152948 XLOC_011794 XLOC_080364 XLOC_145059 XLOC_009707 XLOC_142677 XLOC_156091 XLOC_151488 XLOC_027801 XLOC_142446 XLOC_066274 XLOC_047870 XLOC_016606 XLOC_138563 XLOC_023328 XLOC_153366 XLOC_145368 XLOC_132439 XLOC_056353 XLOC_098774 XLOC_042963 XLOC_040944 XLOC_058498 XLOC_107111 XLOC_154092 XLOC_017202 XLOC_151771 XLOC_102874 XLOC_141401 XLOC_062973 XLOC_002572 XLOC_066208 Coding TCONS_00104257 XLOC_062333 NonCoding NonCoding FBXO42 2:136338528-136351002 j TSS77247 7667 8 TCONS_00104257_3 95 0.503978087909221 2 0.38547262086106 1.62675647047826e-09 4.72791655921068e-05 5.41095430154063e-07 7.53892644778029e-06 6.42993227402873e-12 5.08041412984032e-12 2.7756913033248e-05 1.63149439266299e-12 1.47377527222146e-05 0.000455781934410277 0.000113088404229415 0.000255059478107007 1.94126479283834e-05 1.04324549469944e-09 1.09733681969112e-06 0.00844920693708561 0.00677696754610295 0.00902072634545453 3.36501255669755e-06 2.11402331059063e-10 1.52506422460481e-05 0.00263967693155928 0.0031844294093172 0.00329783032633164 1.25002381884987e-11 6.6953718517622e-06 4.2482840732395e-11 0.000190168434213366 0.000161717773693424 0.000348417977422997 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 2192 90.95 0.204251989043955 0 noncoding 0 0 0 0 -0.019669547381754 0.897449265278559 0.00443305697804825 0.954566805921287 CCATCGGACCCCTTAACCAGGTGAAGCAATAAGTCCTTCAGTAAGAAAAATCCGGCTTCCGTCTGCCGTAGTATCTTGTTAACCATATATGGACTGCTTTGAAAACTAGCCAATCAGCTTGTGCCAAGTTTGAATTTTCCGTAACTCCTTCAATTTTGCCCCAAATCGCGGCGCTGGGAGACAGATTTCAGCCGTTTCCTGTCTCCTTGCTGGTCGACCTCGCGACAAAGCTCTCTCTTTTCTCGAAAGCTGGTGCCATAGTATTGGCTTCTATGCGCCCCAGGCAGTGAGCCCTTGCTCGACGAGAATTTTTGGCGATCGCAAACGGACTAAGGCCGTGTGGTCGTCTGGCTGAGGCCCTGTAGCCCCGGGCTGGGTGTAGGTCCTCGCCACAGACCCTGAGTGGACACCTAGACGCGATTTGTCTAGAGGCTCTGCTGTCGGGTTCTTGCTTCCAGCCGCAGAGGCGCTCCAGGCTCCTCCGCGCTCCTTTCATTTTTTTGGGAAACAGCTCCTGGATCTTTTGGACATTCCTTTGCAATGCAGAAGCCCAGGGAATTGGGTCCTCCTGAAACTTGGAATCATTACTTCGTTGAAGATCAACTGCAGCCCAAGTGGATAGACCCTATGAAGTTCTTCTGTTTACACATTCTTCAGTAGAGCTAAAAAGAGTTAAACCTTGGGTATACCACTCCTGAGTAAAAATAGTACCCATTTTTAACCAGCAGCTCCCCGTCCCCTTTACAGTTCTCAAACAGGGCACATTCTTTATGGACGGGAGAAAGTAAGCGTACCAGCCTTCTTAATACTGGTGGGGCCTGGAAACCCATCACTGATTTCTTGACACTTGTGAACCCTTAACTGACCTTAAGTTACTTTTCATATAGAAATAGGACAGCTAAGACTCCACCTGGCCAGGAAGAGATGAGGACATCTTCAAAGTAGACAGCTTCTGCCCAGAAGTCTGGTCCAGGCCTATATAAATAAATATTCAATCACTAAAAATGTTTAAAATAACATGGTTTCAGTTCAGTTCAGTCGCTCAGTTGTGTCCAACTCTTTGCGACCCCATGAACTGCAGCATGCCAGCCTCCCTGTCTATCACCAACTACCGGAGTTTACCCAAACCCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTCTATCATCCCCTTCTCCTCCCACGTTCAATCTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAACTCTTCGCATGAGGTGGGGATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAACACCCAGGACTGGTCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTGAAGAGTCTTCTCCAACACCACAGTTCAAAAGTATCAATTCTTCAGCACTCAGCTTTCTTTATGGTCCAACTGTCATCCATACATGACCACTGGAAAAACCATAACCTTGACTAGACAGACCTTTGTTGGCAAAGTAACGTCTCTGCTTTTTAATGTGCTGTCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGTGTCTTTTAATTTCAGGGCTGCAATCACCATTTGCAGTGATTTTGGAGCCCCCCAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTCCCATGAAGTGATGGGACTGGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTGACTTTTATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTCCCAGCAATCTTGATTCCAGCTTGTGCTTCCTCTAGCCCAGCATTTCTCATGATGTATTGTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGACATACACCTTCCCCTATTTGGAACCAGACTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGGTATTCCCATCTCTTTCAGAATTTTCCACAGTTTCTTGTGATCCACACAGTCAAAGGCTTTGACATAGTCAGTAAAGCAGAAATAGATGTTTTCTTTGTAACTCTCTTGCTTTTTCCATGATCCAGTGGATATTGGCAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAATCCAGCTTGAACATCTGGAAGTTCATAAGTCACATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCGGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCTACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCATCTTTCAGGGTTTGAAATAGCTCCACTGGAATTCCATCACCTCCACTAGCTTTGTTCATGGTGATGCTTCCTAAGGCCCGCTTGACTTCACATTCCAGGATGTCTGGCTCTTGGTGAGTGTGAGTGATCACACCATCACAATTATCTGGGTCGTGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTGTCCTTTATCGAGCCTATCTTTGCATGAAATGTTCCCTTGGTATCTCTAATTTTCTTGAAGAGATCTCTAATCTTTCCCATTCTATTGTTTTCCTCTATTTCTTTGCATTGATTGCTGAGGAAGGCTTTCTTATCTCTCCTTGCTATTTGGAACTCTGCATTCAAATGGGTATATCTTTCTTTTTCTCCTTTCCTTTTCGCTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTCCTCAGATAGCCATTTTACTTTCTTGCATTTCTTTTTCTTGTTTCATGGACTCCTAAATAATAAGGTATGTTTTTGGAGGACTGTTAAAATTAGGAGTCATAGTTCTGTGTATCATAGGGTTAATCTTTTTACTCACCAATTTTTTTACTTATTATCTGTCTCGTGTATTTAAAAAGGCCTCTTCCACTCACATGATGATTGCCTGAGACTTTAGAATTCAAAGCAGGACTTGTGAATGTTTACAATCAAGTGCAAAAACAATTTCATTCCTGTTATAATAATCTATGCTGCTACTCAGCAAGAAGCAGCTATGTAAGAAAAATACGGTCTTTTTGAGTGAAGAAACTTCAAAAAAATGTAAATGAGATATGAGCTTTTAGATAAACTCTATTAAGAATAATTATGCTTTAGGAATGTCTGTCTGAAATAGTCTGTCCAAATTGGGGTACCTTGAATTTCTAAGGGTTGTGCTAAACTAAGTGATGGAAGTTCACTGAATAGCTAGCTCATTTCCAAATAAAGTAAGATTTTGAAACATTTATTACTGTACATTAGTTTCCTCTTACAGAGAAGCTAAAGAAATTTGGGACTGTTAATGAATAAAAATAAGCTAGCGCAAAAACTTGAATTTGGCTTTTCTCTCTGTTAAAAGGACACACTTTCTTCAGATGTTGAACTGCATTTGACAGTAGATCTAAGTTTATTTGCCTCTTAAATTGTCTGTTCTGTATTTGCCTTTGAAATCCCGTATTTTTACTTTGGCTGAGTGAATAGCTATTATTTCACAGTGACCTATAGTCCCATCTGACTGAGTGCTCTAAACCTTTCTGATATTTGTTGACAAAACTTCCTAAATCATTCTGGTGAAGCACTTTTGGCTTCTAGCTAACTTTGCGATGCTTCAGAGGGACCCTGAAACATCCCAAAGGGAGATATTACACTAATTGGGTTCAACTTCCGTGTTGAATTACATGGGAAATATTGTCAAGTGAATAATAAGTCTCTATGGTAAATGTCACTAATACAGATATCCTAGAAACAATTTACATATAAATTCTGATATATTCAGGTAAAATGTTGCCATAATTCTAATTATTATCTTAAAGTGTTGTCACAGCACTAACCAAGTTTCTTTTGAAAATGCTTCCTCTTCAAGAAGATTTATAGAAAGGACTTTTGGATAAATACAAGTTTCTGAACTGGGTAAGAAATTAACGATTCTAGTGGGAAACCTGATGACTGTACAATGGTTAACAAAAGGACTGAATGAATTGGGAAATACGCTTATCACTTTTATGGTTTCTGAAAAATTACTGGTTTGAATCTGTGTTTTCTAGATCTTAGGAAACCTTCCCTTCAAACTAATTATGACTTAACAGTAATTTGGTAAAATGATATTTAATAAACAAATTGAAACATTTACCTTTTTTCTCTATCTGACCCCTTCAGAGATTGGAAACTCTTAGGGTTCCAGTAACTTTATCAGATAAATTAGGAAGATTATCTCACTAACTGGTACAGAAATCTCAGTTTTGGAGACCTTGAGAAAGAGAGGAATTCACTTAGATCTGTTAGGCAAAATCTGTGATAAGCCTTTGGGATGACTTTCCTAGCCCTGAAAGGTTTTATTTTAAAGTTAAGTTTGAGACTCCATAAAAGTTTCAGCAAAGCAAAAAAAGTCTGTGATCAATTATGGTTATATAAATAATCAGGTCAAGTTTATTGAGAATAGACCTATTTTATAAACAAGTCTTAATTTGGTTATATTTGGTAAAAATGAGGGTGATTTTAGGGAGAAAAGGATGTTTCAATGAGTGTTAAATCCCAGTTTGTTAACGAAAGTCTGTATGTACTAAGACTCATTTCCTGAATGGATCTTTGCTGTTAGGGTATTTTAATGTAAAATTTAATTGAATTATTAAAGGACACTCTCAGTTTGTTTCTGAAGCTTAGCTCAATAATCTGTCTTTGGATAAAGATCAGATGCCTCGCGACCTGCCACCAAGACTGGAAAAAGACATAATTTAAGGAACAGTCTCCAACCTGGCTGGAAGGACCTTTTATCAGCTACTCTTAACTGGCTCATGCACAGTGAAATTGAAGGAAAACTGACTCTTGGACTAACTCCCATTTCCAAAGGCCCCTACACTGGACTGGTCTATAAAGAGGACTGGCTGACCTCAAACTCAAATGAAGACGACGCTCAAACAGCAAAGTACACTGTGCTAGGACGAGAAGAAGACGACATCAGAAGCAGACAGCTTGCCCAAGATGCCCGACCTGATTCATAGGATCATTGACAACGTTTTCTTGATTTCTTGGACCTTTGCACATCAATCAAATGTTTTCTATCACAGACATGATTCTATGCTAATTTAAAACTCAATCCAATTGTTGGGTTGTGGCCTAGTACTTCTGTGTTACCTTGGTGGATTTCTCCTCTCCAGGACTCTGATAGGATAGACCCTAGGAAGTTTATTTTAGAAGAGAGTTCAGTCCTGTTCTGTCTATTCATGATATTACTAGATGGGATCCTCTCACTTGGTCAGTTAATAATACCTGCTCTGACCCTGGCTCATAGATTTAAGTGTTTTCTTAGGGTCGTTTAAACTCAGTAACAAGCTAAGTCTCAATCAAAAAAAAAATGTGATCTCTTGTCTACTAAAAGGAAAATTCCCACAATTATGGGATGGATCTATATGCTTAACACCAGGCTATGGTTAAGTTTAAAAGCTCTTTATGTTGGGAACAATTAAATTGTACTAAGAATGATCAACCTAGTATTATTATAAAACTAGGCTGAGTACTTGGTGAACTATGCCTATTATTAACCTTACAGAGAATGATTGATATGAAACTCAGTGGAGTTGTGGTAGTAACTTATAGCCTTGGCACCTACCAGGATGGATAGGAAGGTGTAGCCTGGGACTCCCATGAACTCAAGGTCATATACATAATAAATTAGAGGTAAAAGATTTACAACAGACCATAGACATTGAGACAGGATACGAGGAGACAAATGCCTGGCTGGAATGGATTAAATATTCTGTGCGCACTTGGAATGAGAGCAGCTGTTATGCTTGTGCAGCAGGTAGGCCGGAGTCTCAGTGGTACCACTGCCACTCGATGGACCTCAGATGCTGTGGGCATAGAATGCATGATGCTCCTCTTCAGGACAATATGGCCTGGGGTAGTAAACCCTGCAGGACCTTGTCACTAATGTTCGTGACTGTGAGGGGTCCAGGGCGTAACCCCCAAGGACTGTCAGACCCCCGTTCCGTAATGCAAACTACACCTCGTGCCTCTCTAGGTGGGGGGAGCAGTTAGCATTCTGGGGGAGTGAATCCGGGTGCAGTGAAGTCCAGTCCTTTGAGGGAATGAACAGCCATTCTGCATGAACTATGGCCTGGGAAGACATGTGGTGTTGTGGAGGACCATTGCTTGAGACTCTAGCGGCCAATTGGGGTGGAATTTGCACCCTAGTTCAATTGGCTATCCTTTTCACCCTGGCATTTCGACACTCGGATCCATCTCATAAGCAGACTAACCATAGAGCCAAAAGGAACACTCTTGCCCCGGGTGGGTCATTTGGTCCATATATATTCTATTGGGGTCCCTAGAGGTATTCCGAATGAATCCAAGGCTAGAAACCAAATAGCAGCGAGGTTCGAGTTGGTATTATTCTGGTGGTCCACCATTAATAAAAATGTTGATTGGATGAACTGTATTTACTATAACCAGCAGAGGCTTGTTAACTATACCAGGGATGCTCTAAGGGGAATAGCAAAACAGATGCTACCAGCAACATGGCATGGGGACAACTGAGTGGCCGTAGACATGATTCTGGGCTTCCCTTGTGGCCCAGCTGCTAAAGAATCTGTCTGCAATGCAGGAGACCTGGGTTCGATCCTTGGGTTGGGAAGATGCCCTGGAGAAGGGAAAGGCTACCCACTCTGGTATTCTATCCTAGAGAATTCCATGGACTATATAGTCCATGGGGTCGCAAAGAGTCGGACACGACTGAATGAGTTTCACTTTCAGACCTGATTCTGGCAGAAAAGGGAGGAGTATGTGTTTTGGAGGGTGTCAATGTCGTACTTTCATACCCAACAACACAGCCCCTGAGGGCACAATAACAAGGGCCTTGCAAGGTCTGAACACCTTGGGTAATGAGTCGGCTGAAAACTCAGGGATAGATGACCCATTGTCCAGTTTGATGGAACAGTGGTTTGGGATACAGAGAGGCATCATGATGTCTATCCTGACTACCCGTATTGTCACACTTGAAATACCCAGGTAGGGTGTTGCATCATTCCTTGTGTCAGGAGCCTAGTGCACAGATGAATATTAACAGCTCTCACCAAGCAGTCCACTGCAGCCTATCATATCAACCTTCTATTCCTGGAGGAGTCTGAACATGAAAGTCATTCGATGCTAAGTTTGAGGAAAAGAATAATCGACTATCATAAAAAGGGGGTGGGAATTGTAAGAAAAATACGGTCTTTTCTACCAAAGAAGAAATATTGAAGAAATGGATTCATTTTTTTTTTTTTTTAGAACAGTTAAATAGGAAGGTTATGTATATATATGTGTGTGTATATGTATGTATCTGGTTTGTGCACAGGATTCCTAGGATGGTGACTCATTGTCAGTCGTTTGTTTTCTTACCTTCCTGGTTTCTCTTCCTCATAAGAACAATTTGGCAGGCTACTTTTGTGGGCTTTACCCTGCACACCTGCAAAGAACTAAAGGGCTGGAGAAAAN EMBV3_11872 GGACACAAATATTACATATCAGATTGTCCTGGTTTATGTTTACATATTTGAAAAGTTCAC Gene GeneID:539023|TRIM36:XM_002690428:146_cdna Constitutive 2 NULL GeneID:539023 10 GENE TRIM36 NULL tripartite motif-containing 36 EMBV3_18405 CAGCGCCGGGGAGAATGCACGAGTCTGACTTGCCTGAACAGGGTTTGAGGTCAGGCTTTG Gene BVT0102_446251 - 1 EMBV3_24263 GK000013.2:62501815-62544923 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049531 1 XLOC_029662 NonCoding TCONS_00049531 XLOC_029662 NonCoding NonCoding - 13:62532694-62533263 - TSS36707 569 1 TCONS_00049531_1 45 1 0 4.78232291952661e-05 5.29794633381137e-05 0 0 4.3384696245578e-05 2.20029812192782e-05 0 4.45497227240625e-06 6.9333269639507e-06 2.53088149576735e-05 5.36422238413572e-06 0.000276502732792323 1.68089036437679e-06 3.16906217866929e-05 8.62251382685017e-06 0 0 0 0.000108383090868256 6.31936375547295e-05 2.93435781998096e-05 0.000573830273851078 0 0 3.0441399640736e-05 0.000179541736571699 0 3.3761623059935e-05 2.13295738003648e-05 0 0 noncoding 0 0 0 0 -0.0735183400870559 0.556387185400614 0.0398056671004828 0.539382633018555 GTTTCCTTGACTTTCTGGTGGCTTCCCTGGAGGATGGTTCTCCTCTTTCACAGATGAGGTGCTGAGGGCAGAGGAGCCATTTGCTCAAGCTTGCTGGGGCAAAGCCTGACCTCAAACCCTGTTCAGGCAAGTCAGACTCGTGCATTCTCCCCGGCGCTGGGCGCTGTGCTAGATGCTGGGTCCAGAAGGCAAGGAAGGGGCCTGACAGTCATGACAGTGAGGGGGAGCTGCCTGCTGGAAGTGGCAGGTGGCCCTGGCTAGGAGCAGCTTGCTAGTCAGCCCGCCTTTCCTGGGTTTTACATCTGGGTTCCACCCCTTGACTCACAGGGGCCTCAGGCAAGTTGCGTAAGATCTCAGGGCCTTGCAGGAGCCCAGAGTGCAAACACACAGGAAGCAGTTAGAGCAGGCCGGCGTTCAGCGAGCACTCAGTAACATGGGAACCAACACACCACCAACCTCAGCATCGCATCATCACCATCACCATCACCATCACCATCATCACCACCATCACCATCATCATCACCATCACCATCACCATCACCATCACCATCATCACCATCACCATCATC TCONS_00045883 . 3' 11661 TCONS_00045883 . 3' 12229 EMBV3_42791 TACCGCTGAGGAGCTGCAGTCGCAATCAAGGTACAGCCCAAGCACCTTGGGTGTGTTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41173 CACCATGACAGAGAATCTGCGAAGAGAACTGTTGTGAAACAAAGCTGGCCTCCCTGTGTC Gene BVV0101_062852 + 0 NULL GK000003.2:114336919-114715051 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174832 1 XLOC_104701 Coding TCONS_00174832 XLOC_104701 Coding Coding ARL4C 3:114712993-114716812 o TSS129649 3819 1 TCONS_00174832_1 192 1 0 6.50032563106606e-06 5.26234090676072e-06 3.08633777045307e-05 1.30465896312764e-05 0.000227531178341572 9.36647736467896e-07 3.05404891151859e-05 0.000187400387181529 0.00061567394060805 1.96961941709885e-06 5.41449407615811e-06 0 1.63237548108118e-05 6.23518716494809e-05 2.32540621418927e-06 0.000933639123348546 0.00150415996293555 0.000724597813153466 0 4.70767265058933e-05 8.9226302644924e-12 0.000498403740315739 0.000189774668291722 0.000535554655730203 1.8142125942555e-06 1.84484623243268e-06 0 2.28848033659788e-05 0.00011186297847952 0.000253461989651499 NM_001102348.1 ARL4C Bos taurus ADP-ribosylation factor-like 4C (ARL4C), mRNA. 0.0 2877 99.88 0.418695993715632 NM_005737.3 ARL4C Homo sapiens ADP-ribosylation factor-like 4C (ARL4C), transcript 0.0 2055 80.61 0.553024351924588 TCONS_00174832_1 sp|P56559|ARL4C_HUMAN ARL4C_HUMAN ADP-ribosylation factor-like protein 4C; 3e-142 399 100.00 0.994791666666667 7 coding 0 0 0 0 -0.132673994840475 0.305232580407209 -0.141581173868611 0.0309195278976503 GCGGGGGAGGGCGACGGGCGCGAGCAGCCCGCGGCGCCGCAGCGGAGACTTCGCAGGAGACAAAGCCCATCGGGAGAGACGCGATGCCCGGCCGGCGCGGGCGCGGGGGCCGCGGCGTCTGAGCGCGCCGAGCCGTGCGTCCCGGGGACTCCAAGCCCGGGCCGGTGCGGGCGGCTGAGGGCGGCAGGCGGGGCCCAGGTGCGCCCGCCCGCGTCGGGCCCGTAACTGCTCGGGAGGGCGGGGGGCGGCGCCCTCCCGCCGCAGCCGCAGTGGCCGGCGCCGCAGCGAGGAGCCATGGGCAACATCTCCTCCAACATCTCGGCCTTCCAGTCGCTGCACATCGTCATGCTGGGCTTGGACTCGGCCGGCAAGACCACGGTGCTCTACCGGCTCAAGTTCAACGAGTTCGTGAACACCGTGCCCACCATCGGCTTCAACACGGAGAAGATCAAGCTAAGCAACGGCACGGCCAAGGGCATCAGCTGCCACTTCTGGGACGTGGGCGGCCAGGAGAAGCTCCGGCCGCTGTGGAAGTCCTACAGCCGCTGCACGGACGGCATCATCTACGTGGTGGACTCGGTGGACGTGGACCGGCTGGAGGAGGCCAAGACAGAGCTGCACAAGGTGACCAAGTTCGCAGAGAACCAGGGCACGCCGCTGCTGGTCATCGCCAACAAGCAGGACCTGCCCAAGTCGCTGCCTGTGGCGGAGATCGAGAAGCAGCTGGCGCTGCACGAGCTCATCCCGGCCACCACCTACCACGTCCAGCCGGCGTGCGCCATCATCGGCGAGGGCCTCACCGAGGGCATGGACAAGCTCTACGAGATGATCCTGAAACGCAGGAAGTCCCTCAAGCAGAAGAAGAAGCGGTAATGCTCTGGGCGGCGACGTTCCGGAGCTAGGCGCGGGGAGCGAGCGAGTCCGGAATGAATGAATGAAAGGCTGTGTGGCCCGCGCGCCCGCGAACAAAGACAGCGAACCAAAGCGACGCTTCGAATTTTTAAAGCGGAGTCTCTGCACCCACATGCAGGACTGGTGACTTAACCTGGTATGTAGGCAAGCTGGCCAGCCTGCGCTCGACCTGCCCCCACCCCCAGCTCAGGGGTCCTTTTGTCTGAACGCCGGAGCTACTCAGGGGGTGGGGGACCCGGCTGGGGAGTGGACGTGCAGGTCCCACCGTCCGCCCTGCTGGCCCAGGTTGGAAGGCTCAGATATCAGAGACAAAAGCGATTTCCTCCTACTCCAGCGGGGCCAGAAGTTCAGGCTTCCCCGCCCTCACGGGGGATCGCACCTGTGAGCTACCTGAGGTATGCGGCTCCCAGAACCCCGGGAGTTCCCATCTGGGGGCACGGTGGCAGTGGGAGGTGCGGGGGGACAACCTCTCCTTGGGCTATGAAAGCTGGATAATTTTATGTCACAGGGCAGGCCCCTGTGAAAATCCATTTGCCCTGCTCTGGGCCCAAACGAGGTGGTGGTTTGGGCCATCAGAGGACTGCGTGGAACAGTACCGCAGACGGAAGGCGCGGGGCGCTGCGCTGGCCTGGGCTGGGGGATGGCCGCGAAGAACGCCCCTTTCCTGGTGCTTTGTGGTAGCTTCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCCATGTGTAGGTCATTATCACACAAAGAGACCAATAAAAAAAAATTAAAAACAAGAAACTGTTGGAGGTGGTGGCAAATGATGCATTTACTCTTTGCAGAATAGTTAAAGGTGTTTAAAGGGTAAGGCTCCTGACGTCAGTCCTGGATGGGGTGTGTGTAGATACAGTGCTGTGTAATCGACATACATTTCTAGACCCATATGTGTGGAATCTTCAATTTTTTTTTTTTTTTTAGCCTGCTGATTGGTTTGTGTGAGCACACCAGCTGCAGATGTGTGCTGAATGACAAGCAGGTTTTGGCAAGGGATGTCTCTTGTAATCCTAACCGCTTGATGATGGGTTATGGTTTTCAGACATTTTTTTTTCCTTAAAAAAATCTGCTACGAATGAATACTCCCCATAGAAATACTCAATTTAGGGGAAAAAAAAAAAAGACTTTGCCCTTTTAGATCCCTTTACGCTGCAAGTGGCGACATGTTCAAATTTCTAATTTGGTTCATTGTGGCCTATCTGGTTTAAGTATTTTCATTGCAAATGTCTCATTAGAGTATTTGATGTTACGCACCAACAGACAAAAGCCCACCTTGTTGCAAAAGCCAACCTCATTGCATGGATTTCCAGGCGAGGGAAAAGCACAAGGAGGTCCTTCCTGATTCCTGCTTGTGGGAACTGGTTGCAGAGCAAATGCAGACACAGTGAGCGCTTGGGATGAAAGAAAGCATGTGACGTAATGGTCACCTGTCCTCAGGCTCCTCACAGTTTACTTGAAAGAGGCTTTGGAAATAAAGTGAAAGAAGAAGAAATACCTATTTTTAATAATGTAATTTAAAAAATCCTTTATAATCAGGACTGAGTCTTGGTTTGCAGAAGCTGTCATTCACCCCCAAACACAGTATCAAAAGGGAAACTTACTGTGTGATTTTGATTTCTTCTTTAAATCCATGTTTACAGGTAGGATTATGTCCCCCCCCCATCCACGAATAATGATAAATTTCTTGTGTGAAGGAGGCCTTTAGAAATTGGGCATGGTCATGCGTGAGCATGTGAGTTAGTCAAATTATAAATCCATGCCTATAAATAAATCCCTGCACTCAAAGTGAATTTAAGAACCAGAGGTAGTAGTCCTGGCTTCCTGCTTGATCCAGTTCCCCTATGAAGTATTTTAAAAGAAGAAACCTAGCAGTCCATCTTCTTTTCTCTTTTGTCGGTGTATTTGGTACCCCTCCAACGCTGGTCTTTTTGTAGAAACTCAGTAGAGAAAATATAGCTGAGCAGTGCTGAAAAGCCTGCGAGGTTTCAGCTTACATATCGACAGCATAGTCACTGATTTCTAAATGGGCTGGTCCCGTCATCTGAAGATCCTGTATAGAATTATTAAAAGAAAAAAAATCCATCTTTCTTTATTTTCTTCACATGCAACAATTTCTTAAGCACTTTGACATTTTGGTAGTTCCACACTATTGAGAGAATAATATATTTATTTTGTGACATTGCAGATGCCAAATACTGTAACCTTCTCGTGCTGACAATATTTTGGTCCAAGATCAGTGTTCAGATTCTGTCATGCTTTACCAATGATGCAAAATGACCTTTTTTTTTTTTTTTTTTTGCATTATCAATACTTAAGGGTGCGGTCAACTGTTAGTAATTGTGCAGTAAAGCTCTGTGGTGTATCAACCAATAGTTAAAAGTCTCAGTTGATATCTGTAGTGTTTGCCCTAATAATAGCCCATTTCGTCTCTGACCAATGCGGGGAGGAAACACAGGCTAAACTACCTTGGAGTGGTCACCTGGGAGATCCCTCCAGTGTAGCTGTCAGTGATTTATTATGCCTCCTGCTCTTTGGAGAATGAATGGGGTCCACATAGAGGAACTTGGCCTCCCCGCAGGAGCTTTTCAAATGTTTTCTGATAGACACAGGGAGGCCAGCTTTGTTTCACAACAGTTCTCTTCACAGATTCTCTGTCATGGTGTTGGGACTATGTCTCCTGGTTTGTTTCCATTTCTACTGCTGTAATTCTGTCCTGATCATCCTCCTCTTTGGGTTCCCGTTTCCTTTTATATGCGTATATGATGCTGTGAACAGAAATAAATTATTTATACAATCAAACGTTTG TCONS_00174833 s 5' 0 TCONS_00174833 s 5' 0 EMBV3_12896 AGCGACCAGAGCACCATCTGCAGGTTCGAGTCTCTCACGCTCTCGCACAACAACATGATC Gene GeneID:784887|POU4F1:XM_002691911:36_cdna Constitutive 0 NULL GeneID:784887 12 GENE POU4F1 NULL POU class 4 homeobox 1 EMBV3_26061 CTGCAGCTTCTTTTGGACTACGGTTGTCAGAAACTAATGGAGAGAATTCAGAATCCTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43357 CATGAACAGGAATTCTTCTCCATCTACTTAGGCCTTATTTGACTTTATTCATCAGCATTG Gene BVT0102_037387 - 1 EMBV3_43569 GK000008.2:25711250-26010375 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03777 AGATCCTCTAAAACTTGTACATGATGCTGTGGAGGAAACCACGGACTGGGTCTATGGCTT Gene GeneID:534061|TRDN:NM_001103280:4_cdna UTR3_Alt 2 NULL GeneID:534061 9 GENE TRDN MGC140240 triadin EMBV3_34762 AGCATGCTACCCATTTTCTGAAGTTATTTGCTGCCAGTATGTAAACCCATTTTCCACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01206 AACTATTTTTCCTTATTAATAGCTGCCTTCCCTCACATCTTGCTGTTCCGGCGGCCACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41394 ACTCTGCATCTGGAGGTGGAGAGGAGGAAGGATGTGATATGGTCTGACTTTGGGTTTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26177 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27339 GATAAAGCTCATGGCCTACCAGCTAGAAAGCATCATCTCTCAGGATTTGAAATAGCTCAG Variant GeneID:509827|ATF2:XM_002685316:163_cdna 143^202 5 EMBV3_16129 GeneID:509827 2 GENE ATF2 CREB2 MGC142504 activating transcription factor 2 EMBV3_09836 CAATGCATGAAGTAGGGCACCCAAAATGGTGCTTTAGGACAACCCAGAGGGATACTGTGG Gene BVT0101_036397 + 0 NULL GK000030.2:52194413-52752085 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250906 1 XLOC_153849 NonCoding TCONS_00250906 XLOC_153849 NonCoding NonCoding - X:52314337-52320067 - TSS188127 5730 3 TCONS_00250906_16 94 0.518150087260035 1 0 0 0 0 1.81155718660069e-07 0 0 0 1.12607663735273e-06 0 3.44669562508898e-05 1.19852752401995e-05 4.20180143174964e-05 0 0 0 0.000218944410290108 0.000417229116006277 0.000131366003114158 0 0 0 3.88515991234094e-05 0.000458034456223002 0.000210655226320988 0 4.09859448715145e-07 0 0.000110635134886992 8.56349740695205e-05 7.23988363983363e-05 XM_586725.7 MYRF PREDICTED: Bos taurus myelin regulatory factor (MYRF), mRNA. 3e-92 345 84.57 0.0514834205933682 0 noncoding 0 0 0 0 -0.220928656629877 0.0877909383075265 0.0422816510317547 0.571427008125126 CTCCAAAATTTGGAAGCTAAAAAATGAATATGGTAAATAAGTATTTAAATAACCAGAAAAGTAGAACATTGCTGATCTAAGGTACATTCAAGGCCTCTGAAATGGAGTAAAAAGCTAAAAAGAGATAATAATCTGAAATGTATAGACAACTGATTAAGATGAGAAGATGATGTGCTACAGAAAAACTAAGAAAACTGAGTAACTAATGAGATCTGCATTGTAGGCTGTAAAAGTTATAATAAAGTATGTGTAAATCAAATCAATGACATTGAGACTATTGCTATTGCTAAGTCACTTTAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTTCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGACTATAGTCTTTAATAACAAAGAGATAAATGTGATGCATGCTATGCTGTGCACTCAGTCATGTCCAACTCTTTGCAATACCATGCACGGTAGCCCACCAGGCTCCTCTGTCCAAGGGGACTATCCAGGCAAGAGTACTGGGGTGGGTTGCCATGTTATTCTCCAGGGGATCTTCCCAACTCAGGGATGGAACCCAGGTCTCTCACACTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGAAAGCCCAAGAATACTGGAGTGGGTAGGCTATCTCCTCTCCAGGGGATCTTCCCAACCCAGGAATTGAACTGGGGTATCCTGCATTGTAGGTGGAATCTCTACCACAGTGTGGGAGACCTGGGTTCAATCCCTGAGTTGGGAAGATCCCCTGGAAGAGGGCATGGCAACCCTCTCTAGTATCCTTGCCTGGAGGCTTCCCATAGAAAGAGGAGCCTGTCAGGCTATAGTGCATGAGGTCAAAAAGAGTAGGACACAACTGAATGAGTAAGCACAGCACAGCGCAGATGAACAGATATATTGGGAGCGACTGAATGAGAGAACATATGTAAGCGTTGTGGTCACACAAAGGAACATTTGAGTTTAGGATTTCAGAGGCAGTTGCACTGTAGGATCATACTAGATGCACATTATATCCATTGGATTTGGTGGACATTTGGCTAAAATTGTGTTTGAAGATAAAGATTTCAAGGAAGGGGAATTCTCTGGTGGTCCAGTGGCTAAGACTCTGTGCTCCCAATACAGGAGGCTCAAATTCTGGTCAGAGAACTAGATCCCACATGCTCCAACTAAGATCAAAGATCCCGCATGCCACAACTAAGACACAGTGCAGTGAAATAAATACGTATTCTAAAAAAGAATTCAAGGAAGTCATGCAGATACATAACAAAGTCTGGGTTTGAGATAAAGATAATAAACCATATATCAAAAGCTTCAACAAATTATAGGTAAGTTATTAGGAGCTGAGTATATGACAGTAATATGGCTATTTGTAGATCAATATAGCCTTATTTTGGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCTGCTTGCCAATGCAGAAGACTCAGGTTTGATCCCTGGGTTGGGAAGATAACGCTGGAGAAGGAAATTGCGACCCATTCCAGTATTCTTGCCTGGGAAATTCCATTGACAAAGGAGCCTGGAGGGCTGCAGTCCATGGGGTGGCAAAAGTCGGACAAACTTAGCAACTAAACAGTAACAGCATAGGCTTATTGTATAAACTTCAAATGAGCATGAATTTACATGATAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAACAACTGCTGATTTGGAAGTGTTACTATGAAAAAGAGTATGACACTGGAGTTACGAGTGTAAAATCTGAAACCAAATTGTCTATGTTCAAATGATGGCTCCTTCCATAGCAGTGTAACACTGAAAATTTAACATATACTCTCTGTGCATGTTTCTTTAATTCTAAAATGCAAATAGCAATTTTATTTACTTTACAGTGTTTTTTTATTTGCTTATTTAATTGCTTAATTAATGTAAAGTATGTTATATCTGTTAAGAACAAGTCCAGCTGCATTTAACAGAAAATCTAAAGAAACAGGAAAGAGAGGTGTTTTGTTTTGTTTTGTTTTTCTTTTTCTGACATGAGTGTATACCTGTTGTTATAAAATTCAGGTACTGGCTGTAGTGACTCTATGTTGCCATCAAAGTCTTCCACCTCCATCTGTTTTTGGGGTCTACTAGTCTTTGGAAGTCAATCTAGTCTTCATGGTTATAAGAAGGCTCTTGTTCTCTAAAACCTCTGCCAAAAAGGCAATGCAATCAAGAAGTGCATTTCTTTCCAGCCAAGAAGAAATGAGAAAAGTATGCAGAGTAAAATAAAATAACAACCATGCATATCAATGGAATTCTCTCAATTTCTAAAGAGTTTTCCAAGGAGGTTTAACCCAACTTTCTCATATCTCGTTGACCAGAATTCTGTCACAAAGTCTTTTGAATAGCAAATGAGACAGAGTAAACATTTAGTAAAAGTCCTCTATCATTGCTGTTATTCTTAACTCTTTATTTTAAGGTTCATAGTGTGTCCTCGAAAAAGTGTCTGCCTCTTTATAACATTATAGGAAAAATATGCCCATGGATAAACATCTGTTATGTTAAGGTAAAAAAGACAGAACATTTCAGCAAATATATTTAAAACATGAAGATGTTTGTTAACCATAGAGCTGGGTTTCCAGAGAACACCATGTAAAGATTAGAAAGAGAGGGGAGGATTATGAAGTTTGATTAGAAAAAGGAATCACAGAGCATTGTAGAGAAAAGGATATGGGAGAAGATAAGCAACTGGAATGCCTTATATCTTAGATTGTATATTAGTTTCCTATTGTTATATAATAAAATATCACAAATTTATTAAAGCCATACAAGTTTTTTTTTTCTTTCTCTTCTTTAATCTCACGGTTTTACAGGTTAGAAGTCCGGGCATGATATGGGTGAATAAACTGTCCAGAGTCTTATCAGATTGAAATCAAGGTGTCATCTGGGACTACAGATCCAATCTTGGCTTAGAGTCTTAACCCAAGAACACTGGTTGGCAGAACTCAGTCTCCTCCAACTGTGGAACAGAAACTCTAGTTTTTTTCTTTAGCTCTCAGCATGAACAACTCCAGGTTTCTAGATGACTCCCACAATACCTTGTCATATGGCCCCCAGAAGCAGATAACAACATCAATGCTTACTTTATTCCCAGAAAACCAGAGTGTGCCCTCCTCTGTTACCAGATAGAGAACATTCTTTGCTTTTAATGGGCTGATGAAGTAAGGTTAGTCCCATCTGGATAATCACCTTATCTTAAGGTCAATTGGTAGTAGTAGTGAAAGTTGTTCAGTCATGTCCGACTCTTTGCGACCCCATGGACTATACAGTCCACGGAATTCTCCAGGCCAGAATACTGTCATTCCATTCTCTAGGGGATCTTCCCAATCCAGGGATCCAACCCAAGTCTCCCACATTGCAGGTGGACTCTTTACCAGCTGAGCCACCAGGGAAGCCCAGGAATACTGAAGTGGGTAACCTATTCCTTCTCCACCAGATCTTCCCAACCCAGGAATCGAACCAGGGTCTCCTGCATTGCAGGCAGATTCTTTACCAACTGACCTACCAGGAAAGCCCAAAGTCAATTGGTATAAGATCTTAATTACACACACAAAAATCCCTTTACAACAGTACCTAGATTGGTGTTTTACTAAATAAGAGGGCAAAGGTGTATGTAGACCTATTGACAGGTATTTTTGGGAGGCCATCTTAGAATTCTGCCTACCATAGAAGGTGACCATGGAAAATAGAATGTGTAGCATGATGTATTTTTCTGGCAGAAACGCCAAGAGAGTTGAGTAGCCTTTGCCTTAAACTGGACTTGGCATTTGTGATTTTTCAGGATGTATTTGTGGCCTGAACTGATTTTTGTATCTTCTTGCAAAGTGAGTTACTTACTAAAGTATTCACTAAAAAAGCACTTTAGAACTTATTGCAAGTTTTTGACCATTGAAAACAATAATTACATAGTATTGTGCTCTAATATTTGTTAGCAATCTTTACACTTGCACTCTGCCATGAAAATTAGTAACCAGTAAATCTGTTTTTAAATACTCAAAAAAAGTAAAATTGCATAGGAATATAGTAAACATTTTCATTGCTAAAATGCTTAAGAAGTGATTTTATGCACCGTAGAAATTTATATTAAATGATTTTTGTTAATTGGGCAAGAGGAATAACTTGCTCTTATTATCAATAATTTGTAGGTATTATCTGTAAGAAGACTCTTCTTACCATTCTTCATTAAATGTTTGTGAATGTTCATGTTTACTATGCTTAAATCTCTGTATATACAATTTGCTCTCAATTATGTTAGTGCATTTTGTTATGTGGGCCTACCTCATAGCTCAGTCGGTAAAAAGACTAAAAATAACCATCAGCTAGAAATAAACCCTGTTAACATTTTGGTGTATTTTCTTAAAATCTTTTTAACATAATTAACACAATTTAGGTAGTATCTGTCCTTATTTTTAATGTACTCCTCTTTAATGCATTTTTATGTTTTCTGTATTAAGAATATACAACTTTTATATTTCATTTTTAAATTAATTTAAATGGAGGATAATTGCTTTACAATATTCTGATAGTTTTCACCACACATCAACATGAATCGGCCACAGGTATACATTTGTCACCCCCTTCCTGAACCCCTCTCCCAGCTCCCTTCCCACAGTATCCCTCTGGGTTGTCCTAAAGCACCATTTTGGGTGCCCTACTTCATGCATTGAACTTCCACTGATCATCAATTTTACATATGGTAATGCACATGTTTCAATGCTAAGAATGTACTACTTTTATAATATTAATGCATTTCAAAATAATTTGTACGTAAGTGTGTATGTGCATATGTTATATAATCAGCATATTTAATGCAAATAGCAGAAAATGAAATATAACTTCAAAATGAAGGAGATAAAAATAAAACAAAATTTAGAACAAAACATACTGAAATTCTAACAGTCATTATCTTTATGGGTGAAGGCTGGGTGATTTATTTTCTTTCTATTATCTGTATATTCCAAATTTTCCATATTAATCAGGGTACTAAATTTAGATTATAGGAACAAATATACCCTTATGTTAAAGAAAAAATAATTTAGAAATTATTATCCTGAAATTGAATTATAAAATGTATTCAAGTGAAAGTTGCCAAAATTAAAATTTTTCTTACAGAAATATTAGAGTGGTTATTATTTTATACTTCTTATACCCTTATTCTGTACATCTGAATTTTAATTAATTTATATAAACAACATAGCTTCATACATTTTTGGTGCTTCTTTCATTACTTATAAATGTAGGTTTTCCTGAAATTGCTTAGTAACATCAGAGAAGGCAAACCTGGATTGCATTATCTTTCCATATAGAGTACATATTCCTAATTTATTGTGAGTGAGATGGACAAATGACCCATCATTGCTTTACCTGTCAACAAACTAATCTTTTTTTTTTTTTTTTTCCATAAACATGAAAAAACTGTTAAATGACAGTTCAGGAGTTTAATCCATATGATTTTTTATAGGTTACATATTATTGAGTTCAATATCATTGGGCTTTCTCAGGTGGCTCAGACAGTAAATGATCTGCCTACAATGCAGGAGATTCCGGTTCGATCCCTGGGTCAGAAAAATTCCTGGAGATAGGAATGGCAACCCACTTCACTATTCTTGCCTGGAGAATTCCATGGACAGAGGAGCATAGTGGGCTACAGTCCATGGGGTTGCAAAGAGTCGAACA TCONS_00244362 . 5' 416470 TCONS_00244362 . 5' 416470 EMBV3_10631 GCTCGACAAGCGAAAACCGTAACGGCCGAATTGGTAGAAACCATTTTGGAAGATTTCTGC Gene BVV0102_041647 + 0 NULL GK000019.2:27997842-27998929 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099421 1 XLOC_059664 NonCoding TCONS_00099421 XLOC_059664 NonCoding NonCoding - 19:27998011-27998368 - TSS73797 357 1 TCONS_00099421_1 57 0.330532212885154 1 0 0 0 0 0 0 0 0.000473724522873063 1.65677967652914e-05 0.000751440632371834 0 0 0.000190302548672993 8.03720463718289e-06 0 0 0 0 0 0 0.000503600619693366 0 0 0 0 0 5.92056711126771e-05 0 5.38105106499935e-05 0 0 0 noncoding 0 0 0 0 -0.572094115265132 0.0829328355875175 -0.04227189579798 0.539015145199023 AGTGCGGGGAAAGTCAGGATTCTCGCCATATTGGTAGTGTAGCTAGTGACCCGTTTGGATTGGGGAAGCTCGACAAGCGAAAACCGTAACGGCCGAATTGGTAGAAACCATTTTGGAAGATTTCTGCCATTGTTTCATGTATGGTGAAAGGAAGAAAGCCTTTGCACTTGCATTCTCTGCCTGGAACACTCCTCTCCTAGATAGCTGGATAGTTTTTACTCATCAACTAAACTGTCAACTTTTAGGAAGGCTTTCCATAATGTCCCTATTTAACGTATACCTCCATATGCGCTATATTACACCATCTTAATTATCTTCACACCCCTATCATTTTCTGAAGTGATTTGTTCCTTGCCT TCONS_00096177 TCONS_00096178 . 5' 171 TCONS_00096177 TCONS_00096178 . 5' 171 EMBV3_33909 AGTTAAGTTTTTCTGGTTCATGCCGTCAGCTCCGTACTGGGTCCTGGCCACCGACTATGA Gene GeneID:613972|APOD:NM_001076301:120_cdna Constitutive 0 NULL GeneID:613972 1 GENE APOD MGC133726 apolipoprotein D EMBV3_04993 CCAGGCTTTTCCCTTTATCTGAGAAATCAGCACACAGAGGACAGAGAAGAAGGAATGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37989 TGTGACACTGATGCTGTTAACCAAAGGGCAGAATAAATAAGCAAAATGCCAAAAGGGGTC Gene GeneID:535702|KLF5:NM_001083727:2_cdna UTR3_Alt 2 NULL GeneID:535702 12 GENE KLF5 MGC139218 Kruppel-like factor 5 (intestinal) EMBV3_05214 GTGGAATGCACAGTCATACAAGTTACATAGGTGGAGAACGAGGTCTTCAGTTCTTTCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33763 CAGCCTCATCCACGCGCTGTGTTCTTTAGGCTATGTGTGCTGCTAGGTTCGTGGGTTATT Gene GeneID:100300875|LOC100300875:XR_084074:669_cdna Constitutive 0 NULL GeneID:100300875 25 PSEUDO LOC100300875 NULL hypothetical LOC100300875 EMBV3_33663 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20589 CCTCCGTCTACTGCTTTCTGACCGTGTTTAGTCCTTTCAAGATGGGAGCCCTCATAATGT Gene GeneID:525095|PIGN:XM_002697784:358_cdna UTR3_Alt 2 NULL GeneID:525095 24 GENE PIGN NULL phosphatidylinositol glycan anchor biosynthesis, class N EMBV3_30411 CAGTTGGCCCAGAGACTCGGATACAAAGAGGCTCGGAACTATGAAGGGGCCTATAGAGAA Gene GeneID:615465|TSTD1:XM_002685854:399_cdna Constitutive 0 NULL GeneID:615465 3 GENE TSTD1 NULL thiosulfate sulfurtransferase (rhodanese)-like domain containing 1 EMBV3_23241 AGCTCACTGTTCACCGTAGATGGGGGTTCAAGTGGGAGAAGCTCTTAAAATCCTGTACCC Gene GeneID:516993|NYNRIN:XM_002690534:575_cdna Constitutive 0 NULL GeneID:516993 10 GENE NYNRIN NULL NYN domain and retroviral integrase containing EMBV3_03911 TATGGTTTCACAGAGCTCCCTGATGCTCCATATGACTCAGATTCTGGAGAAAGTCAAGCC Gene GeneID:538658|LOC538658:XM_002686799:154_cdna Constitutive 0 NULL GeneID:538658 4 GENE LOC538658 NULL similar to CG3570 CG3570-PA EMBV3_11230 AGTGGCCCAACTGGCTTTTGTCATAGAGTTGCCGTTCTGTGGTCCTAATGTACTGGACAG Gene GeneID:784957|LOC784957:XM_002690767:533_cdna Constitutive 0 NULL GeneID:784957 10 GENE LOC784957 NULL similar to olfactory receptor MOR245-21 EMBV3_21351 CTCGAGGAAGACATCACAGAACAGTCAGGGGAGTCAGCATAGCACACACAGCAGTTTCCA Gene GeneID:536993|INADL:XM_002686342:93_cdna Constitutive 0 NULL GeneID:536993 3 GENE INADL NULL InaD-like (Drosophila) EMBV3_07985 CTGCTCATCAACACCACCTGCGACCTTAAGGGCTACACCAAGTCCATCGACATCTGGTCT Variant GeneID:531391|MAPK3:NM_001110018:356_cdna 493^609 1 EMBV3_39308 GeneID:531391 25 GENE MAPK3 ERK1 mitogen-activated protein kinase 3 EMBV3_13592 CCCATTTAGTGAGAAAATCGCGGAACTGGAGAGCAGCGGGAAAGCAAGAAGACTGGAGGA Gene BVT0101_024034 + 0 NULL GK000001.2:85115324-85695602 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16010 GAGGCCCCGTGTCCATGAAGGGCAAAAAGGAGCCAATGCAAGTTTGGTTTCTATCCAGAA Gene GeneID:282433|GUCY1B3:NM_174641:93_cdna UTR3_Alt 2 NULL GeneID:282433 17 GENE GUCY1B3 GUCY1B1 guanylate cyclase 1, soluble, beta 3 EMBV3_40304 CGCCCGTGTGCATGTGTGTGCGTGCCTGTCCGATGTATGTTGTGTCTTAGCTTCCATTTT Gene GeneID:510090|UNK:NM_001080253:371_cdna Constitutive 0 NULL GeneID:510090 19 GENE UNK MGC143291 unkempt homolog (Drosophila) EMBV3_41039 GAGGAAGCCCCCCTAAGCGCAGAGGCCCAGAAGAACAAGCTCTTGGAGCCATCCGAACCT Variant GeneID:513585|C14H8orf33:NM_001046153:86_cdna 223^307 2 EMBV3_09142 GeneID:513585 14 GENE C14H8orf33 C8orf33 MGC137664 chromosome 8 open reading frame 33 ortholog EMBV3_13658 TGGCCCAGGAGAGGACCCTTATGAACTCAGTGAATGTGGTCGTGCCTTCAGTGGTCAATT Gene GeneID:515334|ZNF350:NM_001075708:184_cdna Constitutive 0 NULL GeneID:515334 18 GENE ZNF350 MGC142378 zinc finger protein 350 EMBV3_27907 GACTTCTGGAGGCTGGTGTTCGATTATAACTGCTCCTCTGTGGTGATGCTGAATGAGCTG Gene GeneID:524059|PTPRT:XM_002692322:89_cdna Constitutive 1 NULL GeneID:524059 13 GENE PTPRT NULL protein tyrosine phosphatase, receptor type, T EMBV3_06299 ACTGAAGAAAATATTGACAGAATATGTCAGCCATTAACAGACCAGATATCACAGACACGG Variant GeneID:100140328|SCFD1:XM_002696695:70_cdna 331^541 1 EMBV3_11149 GeneID:100140328 21 GENE SCFD1 NULL sec1 family domain containing 1 EMBV3_34696 TGGCACCCTGGCTACCCTGCACATGCTCTTCCTACTCTATCTGCATTTTGCCTACCACAA Gene GeneID:540431|YIPF3:NM_001076219:338_cdna Constitutive 1 NULL GeneID:540431 23 GENE YIPF3 MGC142928 Yip1 domain family, member 3 EMBV3_01900 CTGGACTGTAATCTTTGTGCCATTGTGTCAAACTCGGGTCAGATGGTTGGCCAGAAGGTG Gene GeneID:782689|LOC782689:XR_084682:117_cdna Constitutive 0 NULL GeneID:782689 3 PSEUDO LOC782689 NULL similar to ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 EMBV3_05495 CTCCTGCCTCCTTTAATAAGAACGCTCGTGATGGGCTTCCCAGGTGGCTCTGGTAAAGAA Gene BVV0101_013976 + 0 NULL GK000025.2:36482532-36486496 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14253 TGCTCACCTGAAACATCACACCCGAGCCGGGGACAATGAGCGAGTCTACAAGTGTATCAT Gene GeneID:507148|MGC157163:NM_001101880:95_cdna UTR3_Alt 2 NULL GeneID:507148 6 GENE MGC157163 NULL hypothetical LOC507148 EMBV3_10510 GACGGGCCGACCATCAAGTTCTGTCAGGAGTCCACATACTACATGGAGGGGAACCTGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11938 ATGCATCCAGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTAGGAGCTGTGTAGGGAAAG Gene GeneID:539047|CYP26A1:XM_002698384:264_cdna Constitutive 0 NULL GeneID:539047 26 GENE CYP26A1 CYP26 cytochrome P450, family 26, subfamily A, polypeptide 1 EMBV3_02995 GGCCAAGTTTGGGCACTCTTCTCTGCGCCTCATACTAATGCTTAGGGATCTCTCCTCCTA Gene GeneID:534787|ITIH5:NM_001102516:14_cdna Constitutive 0 NULL GeneID:534787 13 GENE ITIH5 MGC155215 inter-alpha (globulin) inhibitor H5 EMBV3_24325 GGGGTGACATCATCGGCTCGTTTGCCAGAGTTGAGAGAAAAATGATGTCCACAGTGGTAC Gene GeneID:614713|SLC25A26:NM_001103297:62_cdna Constitutive 6 NULL GeneID:614713 22 GENE SLC25A26 MGC166132 solute carrier family 25, member 26 EMBV3_08144 TCTCCTCCTGTCCCCGCCTCCTGTCTGTCCCAGGGTCTCTGTTGCCACCATCAGATTATA Gene GeneID:539548|CNTFR:XM_002689804:103_cdna Constitutive 0 NULL GeneID:539548 8 GENE CNTFR NULL ciliary neurotrophic factor receptor EMBV3_28915 CGCTGACGGATTCTCTTTAGTACTAAGCAAAATCCTCTTTGCAGGATGTGGTCGAGGCCA Gene GeneID:511160|RAB18:NM_001075499:28_cdna Constitutive 2 NULL GeneID:511160 13 GENE RAB18 MGC139746 RAB18, member RAS oncogene family EMBV3_18977 CGTGGTGGTGGACGCCTGTACCTCCCGGAGATCCAGAAGCTCGTCAAGGAGCCCAGCCCC Variant GeneID:516212|ISOC2:NM_001038123:169_cdna 487^604 1 EMBV3_01630 GeneID:516212 18 GENE ISOC2 MGC134535 isochorismatase domain containing 2 EMBV3_42518 TGTGACCGTAACCTGGCTGGGCCCTCTGTCTTGGTCCCTCTGGACTCCTGCCGTAAGATA Gene BVT0102_218973 + 0 NULL GK000004.2:119541784-120133800 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13702 GAGGTGATACTGAGGGAAGTGTGAGGCCCCTCTGAAACCCTTCTCATGAACTAGAACAGC Gene BVV0102_117212 + 0 NULL GK000020.2:10201158-10244308 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04014 GTCTCCAGAGTGGCTGCAAGTGGTTGGCTGGTATGAAGGAGCAGCTGGCCTAAGGGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28357 AACCTCCCACGCAGTGTAGGTGAAACTGGGCCCTTTTGAGGGACTGTGACTAAGGACAAA Gene BVV0102_189249 + 0 NULL GK000007.2:52937858-52982197 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13800 CTGTGCCAAAGGGTTCATACAGCTTTCAGAATTGCGGGTTCATGAGCAGATCCACACTGG Gene GeneID:783493|LOC783493:XM_002707885:165_cdna Constitutive 0 NULL GeneID:783493 18 GENE LOC783493 NULL similar to zinc finger protein 371 EMBV3_19023 GCAATAAAGGGGGGATGGGGCGTGCTAGTGTTTGACTATGCTCTCGTTGCTCTAATTCTG Gene BVV0102_109143 + 0 NULL GK000002.2:19692049-19699995 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101781 TCONS_00104592 TCONS_00104590 TCONS_00104591 TCONS_00104589 2 XLOC_061753 XLOC_062412 Coding TCONS_00104592 XLOC_062412 Coding Coding HNRNPA3 2:19695236-19706058 j TSS77405 6571 1 TCONS_00104592_2 265 0.0371328564906407 10 0.393678957582479 0.00185477642717626 0.00233628085982432 0.00152844756696804 0.00131410156445643 0.00203981142592522 0.00129595032123979 0.00190188563667698 0.00169627002272916 0.00345564295156075 0.000645251368908729 0.000341098201792964 0.000256584749247536 0.00022677513655291 0.00081720411117903 0.00101025785723531 1.16809043596222e-06 5.78589223051995e-06 0.00569445098406275 0.00187798576689366 0.00158137891878996 0.000859142536017848 2.54321390623873e-08 0.000732623934152846 0.00187142249340761 0.00203124784292753 0.00177102569363986 0.00149897335774093 0.000442027512842461 0.000557064464858717 0.000436357050473601 XM_005202367.1 HNRNPA3 PREDICTED: Bos taurus heterogeneous nuclear ribonucleoprotein A3 (HNRNPA3), transcript variant X1, mRNA. 0.0 3898 98.32 0.341957084157662 NM_194247.2 HNRNPA3 Homo sapiens heterogeneous nuclear ribonucleoprotein A3 (HNRNPA3), 0.0 4206 87.35 0.522599299954345 TCONS_00104592_2 sp|Q8BG05|ROA3_MOUSE ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3; 2e-103 310 100.00 0.592452830188679 4 coding 1 0 1 1 -0.0201270197580364 0.903609236253828 0.00184836284568388 0.969062338928859 CACGTGACGGCTAGCTCCGCCTCTTCCTCTCGGTCCCATATTGAACTCGAGTTGGAAGAGGCGAGTCCGGTCTCAAAATGGAGGTAAAACCGCCGCCCGGTCGCCCCCAGCCCGACTCCGGCCGTCGCCGCCGCCGCCGGGGTGCAGGAGGGTCATGATCCCAAGGAACCAGAGCAGTTGAGAAAGCTGTTTATTGGTGGTCTGAGCTTTGAAACTACAGATGATAGCTTAAGAGAACATTTTGAGAAATGGGGCACACTTACAGATTGTGTGGTGATGAGAGACCCCCAAACAAAACGTTCCAGGGGCTTTGGTTTTGTGACTTATTCTTGTGTTGAAGAAGTGGATGCAGCGATGTGTGCTCGACCGCACAAGGTTGATGGGCGAGTAGTGGAACCAAAGAGAGCTGTTTCTAGAGAGGATTCTGTAAAGCCTGGTGCCCATCTAACAGTGAAGAAAATTTTTGTTGGTGGTATTAAAGAAGATACAGAAGAATATAATTTGAGAGACTACTTTGAAAAGTATGGCAAGATTGAAACCATAGAAGTTATGGAAGACAGGCAGAGTGGGAAAAAGAGAGGATTTGCTTTTGTAACTTTTGATGATCATGATACAGTTGATAAAATTGTTGTTCAGAAATACCACACTATTAATGGGCATAATTGTGAAGTGAAAAAGGCCCTTTCTAAACAAGAGATGCAATCTGCTGGATCACAAAGAGGTCGTGGAGGTGGATCTGGCAACTTTATGGGTCGTGGAGGAAACTTTGGAGGTGGTGGAGGAAACTTTGGCCGTGGTGGAAACTTTGGTGGAAGAGGAGGCTATGGTGGTGGAGGTGGTGGCAGCAGAGGGAGCTATGGAGGAGGCGATGGTGGATATAATGGATTTGGAGGGGATGGTAACTATGGTGGTGGTGGAAACTATAATGATTTTGGAAATTATAGTGGACAACAGCAGTCAAATTATGGACCCATGAAAGGGGGTAGTTTTGGTGGAAGAAGCTCGGGCAGTCCCTATGGTGGTGGTTATGGATCTGGTGGTGGAAGTGGTGGATATGGTAGCAGAAGGTTCTAAAAACTCAGAAGAAAAGGGCTACAGTTCTTAGCAGGAGAGAGAGCGAGGAGTTGTCAGGAAAGCTGCAGGTTACTTTGAGACAGTCGTCCCAAATGCGTTAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAGAAAAGTTACTGCAGCTTAAACAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGCAATGTAGTGTCAATTAGATGTACATTCCTGAGGTCTTTTATCTGTTGTAGCTTTGTCTTTTTCTTTTTCTTTTCATTACATCAGGTATATTGCCCTGTAAATTGTGGTAGTGGTACCAGGAATAAAAAATTAAGGAATTTTTAACTTTTCAATATTTGTGTAGTTCAGTTTTTCTACATTTTAGTACAGAAACTTTAACAAAATGCAGTTTTGAAGGTGTTTCCTTGTGAGTTAACAAGTAAAGAAGATCATTGTTAATTACTATTTTGTATGAATTTTGCTAAAGTTAACTGTAAAGAAACACCTGCTGACTTGCAGTTTAAGGGGAATCTATTCTCCCCATTTCCAAACCATGAAATGAATGGCTCTGACATGTGGAGAGAATAGATATTTGTATGTTTGCAATGTGTGTTTTAGATAATAGAATTGGGTATTTAAATTAGCATATTTGTGAATTTAATAGCATTAAGATTTACCTTCAAATGAAAAATCTCAAAATTTATATTTGGTTTTTGTGCATTTTCTTTCAAAATGTAATCATGATTTTAGTGTATTAGCTTTGCTGAGAGTCCTAGCTGTGTTTAGAACATCTCCATTCTACATTCACCTTGGTCACAAGTGATCTGCTGCCATAGTTTTATTTGGGTGTAAAGAATGTCTACTGCCCTCTGTTTAAATTCTGGGAAGGGGTAGTGAATGTTTCCCCTTTTCTCCTACCTTAGGAAACATTCTTAAAATGTTGAAAATACAAGACCACTAAGCCTGCTGTATCTGAGCAAATTAGTGGCTATCTTTTTTTCCTTTTTAAAGCACAAGAGGCCCGTAAATCTTCAGTTATTTTCCTTGGTTTAATATATATTTTTTTGATACAAGCTCTCAGAGCAAGGGAATAAAAATCATGCATTGTTGAACCCTTAACTGGCTGGCATGCTTTCCTGTTTGTACCCTCTGCATTTTACTGGGTGAAAACCAAGGATAGTCTAGATGGAAATCATCTCAGATACTTAACTGCAGTAGACTTGCAGCACAGTTGCTTAGTACAGAAAAGCTTTTCACTTCCCCGAGACCTGGATTCAAATTTGAATAGTCAGCTTGTACTCACTTAAAATCCCAAAGAACACACTGTTATTCATGTGTATGCTTGAACCTAAATCATGTTGGTATGAGTTTACAATTTGTTTGGAAGATCCTTGTTGAGAAGAGTTTTAGATAACAAGGTCACATATATATATATATATAAAAATCAATGTCTACTGTTTTGCGCCAGCTAGTGTTTACAATTTCATTCAAGCCCTGAGTATGTGCCCTGTTGTTATTGTTTCTTTGGCAGTTGAACGTTGAATTCGAGTTTCTTATTTTTGTTCTAAGAAGTACTAAGCAAAACAAGCAATAAAGGGGGGATGGGGCGTGCTAGTGTTTGACTATGCTCTCGTTGCTCTAATTCTGTGCCTCTGTGCATTAATATTTGGATGCATGCCAGCATGGAAATTGGTCTTCACAGACACTGCAGTTTTTCAGAAAACACTCACAAACCAATAAATGTAACAGACAACATTCCATTTGTTAATGGACATATGTGAATAAGCAGTGTAGAAAATAGGCTAATTATCAGCAAATGGTTAAGTCTTTAACAACTTAAAAGTGTGGTTATATAAATGGACACTGTCAATGTTCATAACTTAAATCTGGGTACCTGGTCAAAATAATGCTTGGGAAACATTTATTAAAATTAAGCTAAATTGTCTCAAGGTTTTTTTTATTCCTATAATAAAGGTTGAAGGAATGGGGGAGGTTAACATTTCCTGTTTCTATGTTTGTGAAATTGTTTTGACACAACCTTGACAGTATCCTTTAATGACATATGAGGTTAATTGTACTGTTAACAAAACTTTCTGTGTTCTGGAACTAGTTTAATAGTGAAAATACTGTCAGTTAAGTTGATGTTTGCAACCTATAAGCAGGTGAAATCTGTGTATGTGACCTGTTTATAAGTTGTATTGTTAGCTTAGTTCTTGTGAACAGTGTGGAAAAGTTAAGCCATGAGGAGAGCGATTTAACCAGCTTTAAAGGACCTAAGAGGTGCTTTTTAAGCACGATGTGGATCAAACGAGACTCACTAAGACAGGACTTCAGCAGCATTTTGAGTATGGACAAGTCAGCATAAATAAAGAATGACAAGGCAGCAGCAAGAGCTTCAACTACAGAGAAGTGAAGGCATAAAATACTATGGTGATAGTGAGCAACTTTCCAAAAGCTAGTTAAATCTGCTTATTACAACTGAAATATCGAAGAAGGTCTAGCAGGAAGGAGCTCTTCGCCTTTTGGAACACCAATGAGAGATAGTTGGCCACAGTCACTAGGTCTAGCATTTAGACCTGCGAGGAAGGGCAATAAGCATTAGGTAAGGTTTGAATTTGAATTTTTTCACTAATTAAAGAGTAATTTTTTGTAAAGCAAGGTAAGAGTAATTTTTTTGATTTGCAGGTTGAATGAGAACCCTACTTGCCTAAATGAGGAATGTCTTTCCTACCATCTTAAATACGAAGGTTTCTGGCTGGGTAAGGTTTGTAGCTCACAGTAAAGCCTGATGACACCATTTGTTTCCCCATAAATTTACAGTACATATTTTAAAACTATTAGATACTTTGGCACACTTTTTCAGCTGAAAGCTTTGTCTTGAGGAATCACATCCAGCACATTTTAAACAGTTTTAAGATTTTCTCTGCAAAAACCATGAGTGTTGATCTTGAGTCAGATATAAACAATTCATTGTTGGTGTCCTTAGGATAAAGTCAATTTTTGAAAAGAGAGTGACCAGATTTTTTTAAAGGATTTTTGTAACAAGCATGACTTGTAACAGAAGCATTACACTTCCAATCCTCATTCTAGGGGAAAAAAAAACATCTGGAATGAACTTTCAAAACTGTCAGATCATACAGATCTAAAAATGGTCTTCATTCAAGTGGCCTCATACATAAGTAAGTTCTCTTGCATATGACTTCAGGGAATTATTTGGACTAATAGGATAAACTTTTGGTTCTCTTTTGGTTTTGTTGTTGACCTGTTAACCAGAAGTAGTGGGGCCCTACATAAACTAAAGCTCCTTTCTAAAAGACAACCTTTCCCAAAGAAGAGTTAAAAAATACTCCATTGCTACACAAAGTCAGATGCTAACTGTTCATAAGGGCTATTATTGCTGCCCCAAAAGGGCTCATTAAAATTTGAGATTTGGTGTTAATTCACTTTTTAAAATAACATGAGGGGAAGGGGACAGATGGTTAAAACTAGTTTCTAAATTATAAGTCAAGTTCTTATATATAAACAAGAGTAGTAAGTTTGCCACATTTATTTTCAGAGAATGGCTGGTTGGGTCTCTGACTAAATCAGGGCTGAGTTTCTACACCTAATAAGTGTTAAATAAGGTAAATAGCCTTTTTAATAATTTTCTTTACAACATGGTTTTTAATGACGCAGATTTCCTAAGATAGTGAAACATTTTCTTTTTTAAAGGCAAGACATTGTTCTTTTCCAGTCCATCGATTTTATGAAATAAAGTGATTTTATTTAAATGTAGTTCCACCGTCATTTCTGAAAAATACGATGCTCTTAACACCGGTAAACGAAGTTATACAAGAGATGGTCAAGGCAAACCTTTCGTCAAAACTCCTAGGTTATAGCCTCCCACACTACATTTCTTTTTTAAAAAATCAATTTACACTCATGTCCTAAAGAAGAAAATTTGGTAAAAAGGACCATTTGTTGAACAGTTGAAATAAAATTGGTTTTAAGAGTTCTAAATATGTAAGTCACAATTTGAAATATTTCTAATGCCAGTATCTCTTGGAATTCCAATAATTGTCACAAAGTAGTGAGTAAGCATGCTAATGTGCAGGGGAACGTAAGGATTGTTAGCCTATATCAAGTATTCAAGATTTCTTTCCAATCAATGTTTTACTCTGATTTATAAGACTTTAAGAGGTGGTCTGTAATGGATTCAAATGTTTTATTTGTAGTATAATGAAATGTTTACAGAAAGAACTTTTTCATTAAAATATTTTTAGAAATGTGTGTGTTGTTTTGTCACTTCACAATGTTCATGTGACTTCAATGGTGAATAGGTGGAAGTAAAAAAGGAAACCTGGAATGAGCCTTCACATTATCAGTTAAAGGTAGTAAACATCACATGAGGGATAGGTGTGGGAAATTTTACCTCCACTTAAGGATTTTGAGTGATAATTCAGGTGATTGGTGAGGAGTGAATCAACTTTCCTTGGATAAAAATTTTAGTAAAGCAGTTACGTGAATAAGCAATTCAGAGGAAAGGGGATTCCAAATGTTAGAAGGTACTCAAGTATTTGGGTTTTTTATTTTTGGCTGTGCCAAGTCTTGTGTAGTGGGTATTCTTGAGTTGCGCTGAGTGGGGCTAGCTACTCTAGTGATATGAGGGCTTGTCATCTTGAGAAACAGGCTCTAAAGGGCTCAGTAGTTGTGGCACACAGGCTTAGTTTCTCTGGCATGTGGGATCTTAACCAGGGATCCAACCTGTGTGTCCCTCCTCCCCCCAGTGCAAGGCAGATTCTTAACCACTGGACTGCCAGGGAAGCCAAAAGTATTTGGTTTCTTAACTTCAAGAAAGGCAATTGAGCATTTTAAGGGTTGGGAAAAGATAACACTTCAGGCTCTTTGCATTGATAGCTATTAACATGTTAAATTCTTTGTGAATTGATACAGTCTTGAGGATTTGAGTTTAATGCTTGAGTAAAAGTAAGCTATTTTTTCAGAATGAAAATGCAAAATGTTCAGTCAAGACAAATTGGAGTCTCCCGTGTACTAGAATTAAAAGTGGGATCCAGGTTTAATTGAACTTGGGACTGAGTATGAAGTCCCAAGGGTTGGGGGAAGAGTAAAGTAGGTATAAAATGCCAGTTTCGTTTACTGCTTTTTCAGTCAGGTAGGGGCAAGGGTGCATTAATCTGTTTGCCTGGCACGATACTGAAAGCTGCTTGGGAAATAACGAATTTATCTGTACTGTTTTTAAATTTATTGATAATGTGAATAATGTTAATGTACAAGGATGTGGACAGCTTACTGAGAAATGGTAAAATTTCAGCACATCCATGTGTATAGACATGGGCTTATCACAAGGATTACAGATTCTATCGGATGTTCGTTGTATCTGAAAAGTAGGATGCATGTAATTTTCATTTAAAAAGTACATTGTTGAATTAGTCCATTCTGCTAAAAATTTTGAGTTAACTGCA EMBV3_26502 GCACAGGAGCCACCGGACTCCATCCGGCTTTCCACTCTGCACTGTAATTGTCACACCTCA Gene GeneID:518906|GPR153:XM_002694111:433_cdna Constitutive 0 NULL GeneID:518906 16 GENE GPR153 NULL G protein-coupled receptor 153 EMBV3_04324 AGGCCTGTTTTCCGTGCTGTATGCCTGGTTTGCTCTCTAGCCTTGACTAGCGGGGGCTAA Gene GeneID:515229|SMCR7:NM_001077925:33_cdna Constitutive 0 NULL GeneID:515229 19 GENE SMCR7 NULL Smith-Magenis syndrome chromosome region, candidate 7 EMBV3_10603 GAAGGTCACCATTGCTCAGGGTGGTGTTTTACCCAACATCCAGGCCGTGCTACTACCTAA Gene GeneID:616634|LOC616634:XM_002697498:182_cdna Constitutive 0 NULL GeneID:616634 23 GENE LOC616634 NULL similar to histone cluster 1, H2ag EMBV3_14650 ACCTATCAGCTGTCTCGCTGGACCCCGGTCATCAAGGATGTGATGGAGGATGCTGTGGAA Gene GeneID:515618|STXBP2:NM_001046208:38_cdna Constitutive 0 NULL GeneID:515618 7 GENE STXBP2 MGC134077 syntaxin binding protein 2 EMBV3_13405 GGAGCTGCTGCGCAGGCTCTTCACTGTGTACCCTAGCACCAAGGTCTACTTCAGACATCT Gene GeneID:100140603|HBM:NM_001083768:2_cdna Constitutive 0 NULL GeneID:100140603 25 GENE HBM MGC148981 hemoglobin, mu EMBV3_17245 TTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAAT Gene BVT0102_130499 + 0 NULL GK000010.2:60639085-60913313 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017462 TCONS_00017463 TCONS_00017464 1 XLOC_009039 Coding TCONS_00017463 XLOC_009039 NonCoding Coding - 10:60706654-60805381 - TSS11925 164 1 TCONS_00017463_1 43 0.841463414634146 2 0.998359094868626 0.00180620590103265 0.00355765795941731 0.00146224162751944 8.5852687571867e-06 0.00250391080378485 0.000232937546225898 0.00218246367103194 8.52284636201978e-10 2.90921193131847e-08 0.000268413912190816 5.65646237967364e-05 0 0.000879633517189205 0.00212362513007484 0.00163130390700518 0 0 0 0.000570829416035303 0.00184291156558133 0.000717288666211864 0 0 0 0.0020105067347413 0.000895805674451052 0.000145305678949217 4.30781226782246e-05 5.15262098735381e-05 0 XR_248600.1 LOC101930402 PREDICTED: Homo sapiens uncharacterized LOC101930402 (LOC101930402), transcript variant X1, misc_RNA. 3e-10 68.0 79.57 0.548780487804878 0 noncoding 0 0 1 1 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 TCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTGTTGATACAGAGCCCCTGGTTGAGTGTCCTGA TCONS_00014275 TCONS_00014281 r 3' 60362 TCONS_00014275 TCONS_00014281 r 3' 60393 EMBV3_07832 CATTCCCACAGCTTAGCAGGAGCAAAGGTCGTGACAGAGGGTTTTCTTGGAGAGACTCAC Gene BVT0102_026389 + 0 NULL GK000004.2:47453581-47508241 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181498 TCONS_00181499 TCONS_00181505 TCONS_00181507 TCONS_00181493 TCONS_00181494 TCONS_00181490 TCONS_00181497 TCONS_00181500 TCONS_00181491 TCONS_00181496 TCONS_00181506 TCONS_00181503 TCONS_00181502 TCONS_00181501 TCONS_00181495 TCONS_00181492 TCONS_00181488 TCONS_00181504 TCONS_00181489 TCONS_00181487 1 XLOC_110623 NonCoding TCONS_00181505 XLOC_110623 NonCoding NonCoding - 4:47476116-47507967 - TSS135828 444 2 TCONS_00181505_1 69 2 0.986122448979592 0 0 0.000125839476173466 0 5.52162926496564e-259 0 3.80653547735051e-193 7.44317975108753e-212 0.000184364542957911 2.77338984883639e-54 3.93195630360103e-178 0 5.76650764319316e-187 0 0 0 0 0 8.70390614839761e-05 0.0115432607649532 2.75442905598051e-05 0 0 0 1.73731070079302e-302 2.62180863702399e-260 1.19306320479522e-127 0 0 0 XM_005221148.1 BIRC5 PREDICTED: Bos taurus baculoviral IAP repeat containing 5 (BIRC5), 1e-33 147 85.27 0.288288288288288 0 noncoding TCTTTGAAAGGCGTCCGATCCTGGATGATAGGAATGCTGTTTTGGTCAGAAATCCAAAGATAAAGGCCGGCGCTCCCTCTTTTCTTGTGGACGCCTGTGGCTTCTGATGTCGTATTTGAGCACTTCAGAGACTCTAGTGGTAGCGTTCACTTCTCTGTGGCCCCGGGAGGCAGCAGCAAGGCCATTCCCACAGCTTAGCAGGAACAAAGGTCGTGACAGAGGGTTTTCTTGGAGAGACTCATGGCAGAAATTCAGCAGTGGACATTCCCATTTCCTGACGGAATCTGCAGTGTGCACGCCAGAGGCCAGTGGTTAAGTCATAACGGACCTGTGGTCACATTCACCCATCACATCTCAGCTGGACAGCCATTTACCAGCTTCGTGAAGCCCAAACACCTTGCTGTAAAAGGAATATATGCATGTGAACAAACATCTCCCCTCACC TCONS_00183888 r 5' 22022 TCONS_00183888 r 5' 22022 EMBV3_20131 GGTTATAATCAGAAGTTACACCGAGATGACAGAGAACACGCCAAAAGCCTGGGACTCCGC Gene GeneID:100140616|LOC100140616:XM_002696431:49_cdna Constitutive 0 NULL GeneID:100140616 20 GENE LOC100140616 NULL hypothetical protein LOC100140616 EMBV3_36570 GAGGGGCATACGTTGCCAGACCCAGGCTATAATTCAAATGAGCAACTAAGTCCTGCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04500 GTCTTTGCATTTTCTCACTTCTCTGACAATTTTGCTCACTGGTACTTGGCGAAGGCCTAG Gene BVV0102_335742 + 0 NULL GK000014.2:1907326-1913046 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03575 TCGCCGATCAGAAGCGAGAGCGGCGTGCTTTGGGTTCCGGGTCGCTCCGAGGATGGTTCT Gene GeneID:783161|LOC783161:XM_002684852:220_cdna Constitutive 0 NULL GeneID:783161 1 GENE LOC783161 NULL similar to LOC152217 protein EMBV3_20352 ATGCCCCCCTAAAGATGCTGACATGTGTCCTAATCCCCCAGATCCTGAGACTAGAGGAAC Gene BVV0101_036851 - 1 EMBV3_00199 GK000029.2:47019519-47037687 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36161 TCCACCTGCTCCTCTCACCTCATTGTCCTCTCCCTGATGTACGGCAGCTGTGTGTTTATT Gene GeneID:521142|LOC521142:XM_002698959:87_cdna Constitutive 0 NULL GeneID:521142 28 GENE LOC521142 NULL similar to olfactory receptor MOR119-1 EMBV3_33115 ATGAAGGGGTGGATTAGATCGGCTCAAGGTCCTAAAACGTTCGACTTCCCACTGTGATGC Gene GeneID:533256|UNC5C:XM_002688134:16_cdna UTR3_Alt 2 NULL GeneID:533256 6 GENE UNC5C NULL unc-5 homolog C (C. elegans) EMBV3_01533 CCGTCTTGTTTATGTGGCCGGAGAGGCAGTCAGGTGTGGCCTGTACACGTATGTTGTTGT Gene GeneID:514185|AMPD2:NM_001143856:101_cdna Constitutive 0 NULL GeneID:514185 3 GENE AMPD2 NULL adenosine monophosphate deaminase 2 (isoform L) EMBV3_43066 GAAAAGTGACGGTAAAATACGATCGCAAGGAGCTTCGGAAACGGCTCGTGCTGGAGGAGT Gene GeneID:783497|PPP1R14C:XM_002692947:35_cdna Constitutive 0 NULL GeneID:783497 15 GENE PPP1R14C NULL protein phosphatase 1, regulatory (inhibitor) subunit 14C EMBV3_16809 GGCAGTTCTCACCTCAGAACCACCAAGGGCGCTTTTGAAATAGACACAAATGTGACTGAG Gene BVV0102_439038 + 1 EMBV3_06977 GK000017.2:18369334-18444869 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074992 1 XLOC_046470 NonCoding TCONS_00074992 XLOC_046470 NonCoding NonCoding - 17:18373946-18377327 - TSS56674 617 1 TCONS_00074992_2 53 0.238249594813614 3 0.818343195266272 0 0 0 0 0 0 0 0 0 0.000646849169591889 3.71018828817833e-06 0 0 0 0 0 0 0 0 0 0 3.60810620308103e-05 0 0 0 0 0 0 7.86807752047623e-06 0 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 2e-39 167 85.52 0.233387358184765 0 noncoding 0 0 0 0 -0.103803136692547 0.451927600215661 0.0115130735728796 0.824364328994501 CCGGCATTAGAGCTGGCCTTCTCTGCTACCAACAAGCCCGAGGCAGAGACAGAAAACATACCAGCATCCCACGGATGCCCAGAAACAGAACGATCACAATTATCAAGGACCGTAATACTCCTGACGGAAAACCAGCCCAGGGAGGAATGATCACACAGCCTCTTGGAGTGGGTCTGGGGGAATAAACCAGCTGGGGGAAGCCAAAGTGAGTGTCCTTGGAGCCCAGGAAGGAAGAGGAACTGGAAGGATCTGGATTGGCAAGAGGGAAGAGCCCACTGCGCTCTTCTGTCCATGGGATTCTGCAGGCAAGAATACTGGAGTGGGTTCCCATTTCTGCCTCCAGGGGATCTTCCAGACCCAGGGATTGAACCCATGTCTCCCGCATTGGCAGGCGAGCTCTTTATCACTGAGCCATCACAGGTCCACCAGTATTTGCCAGCTAACTGGTTTTGATGTTCAGAGACTTGGCAGTTCTCACCTCAGAACCACCAAGGGCGCTTTTGAAATAGACACAAATGTGACTGAGAAATCTCTCAGACACTGCGACACCAGCGTGGCCAGCTACTGCCTCCAAGAAATTACTGAGATTTCTACACACGAAGAGAGGAAGATGCACC TCONS_00076770 r 5' 4354 TCONS_00076770 r 5' 4354 EMBV3_00256 CCAGCCTGACTCCTCTGATTATTGCTGCAAAAGAAGCGATTAAGAACAGCAGCCGCTAGG Gene GeneID:534526|PAK3:XM_002699942:108_cdna Constitutive 1 NULL GeneID:534526 X GENE PAK3 NULL p21 protein (Cdc42/Rac)-activated kinase 3 EMBV3_38173 TACAAGATGAAGCGCCAGGCCAAGGACAAAGCGGCGCAGCAGCTGCAGCAGGAGGCCGTC Gene GeneID:787396|LOC787396:XM_002707723:184_cdna Constitutive 0 NULL GeneID:787396 13 GENE LOC787396 NULL similar to homeobox transcription factor EMBV3_20894 AAATCGATGACAGGCTCTAGTCACTTTTGTATTCCTCTGCCGCCGCTCTTCACCGCTTCA Gene BVT0102_209657 + 0 NULL GK000030.2:97058720-97077308 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252830 1 XLOC_155771 NonCoding TCONS_00252830 XLOC_155771 NonCoding NonCoding - X:97058845-97059382 - TSS190051 537 1 TCONS_00252830_1 70 1 0 0 0 0 0 0 6.66118133909706e-06 0 0 0 0 0 0 5.34317875299504e-06 8.75976319389186e-06 4.56815681810698e-05 9.836702943492e-05 3.09167283478059e-05 0 0 0.00145971408093834 0 0 0 0 0 0 0.000360058982381654 0 0 0 XM_005200177.1 LOC100336005 PREDICTED: Bos taurus constitutive coactivator of PPAR-gamma-like protein 2-like (LOC100336005), mRNA. 4e-136 488 100.00 0.500931098696462 0 noncoding 0 0 0 0 0.0166551874832506 0.917766107731942 -0.00151215947995861 0.980469808078334 GGGAGGGTGAGCTAGAGAGGGAACGAGGGCGGGGTGAAGAGGAGACAGCTGACTGGATTTGGGAGGAGAGAAGGGGAGAGGCCGACCGGACTCAGGAGAGGCTGGGAGGATAAAATCGATGACAGGCTCTAGTCACTTTTGTATTCCTCTGCCGCCGCTCTTCACCGCTTCAAAAGGGGTAAAGCCTTTTCCTGCCACCTCCGGGAGCCATATTGCCTCTTCTCTGTGGTACACGCTTTCCAGTCGGAGGCGGGGGTGGGGGAGTAGCGGGGGCGGGGCAGGGAAGCGGGGCATCCTGGGAGTTGTATTCTCTTCTAAGGCTTCAGGATAAAGAGTTGGAACTAAATTACCACCTTCGTCTACCCTTGTATTCACTAGGTATCAAGGGGCGGGGCGTGATAGGCATTTAGGATTTGCACTCCAACTCTACATCCACCGAGTTGCTTCAGGCTGTTCATCGCCTTTCCCAGGAAAAGGAGTTTGGGGGATAGTGATGCATCATGGGAAAGGAAGTAAAGTGGATTATTATAATTCACC TCONS_00247788 TCONS_00247789 . 5' 67 TCONS_00247788 TCONS_00247789 . 5' 67 EMBV3_01992 TCAGCTGGGAGCTTACATGCCTCATTGTTACCAAAGCCGATCCTTAAAGCCGTCATCCTG Gene BVV0102_141907 + 0 NULL GK000012.2:90590819-90609709 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15900 GTCGGAGACGATCCAGGTCCCGGACATCAGTGACTAGACGAAGATCCCGATCAAGAGCTT Gene BVT0102_037161 + 0 NULL GK000025.2:2289643-2297956 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145924 TCONS_00145926 TCONS_00145928 TCONS_00145932 TCONS_00145929 TCONS_00145931 TCONS_00145925 TCONS_00145927 TCONS_00145923 TCONS_00145930 1 XLOC_088977 Coding TCONS_00145932 XLOC_088977 Coding Coding SRRM2 25:2286158-2304553 = TSS109240 9021 1 TCONS_00145932_9 2741 15 0.510383820811134 0.00502481058541636 0.00308332911735389 0.00352313819973666 0.00174799956180488 0.00271387310521589 0.000685410253376617 0.00143815643014063 0.00230388098872587 0.00197335993390829 0.000281029501256223 0.00115418384549116 0.000923985550371806 0.000840460484154425 0.00138050964926319 0.00086326313966998 0.00925325691999679 0.00422383348002563 0.00452641180849412 0.0021458313049632 0.00446094711521892 0.00182738267967749 0.00438434176484195 0.0040718439224961 0.00551595797953926 0.00737698101023997 0.00611619795481278 0.00451437998973402 0.00178751139251314 0.00112639025194367 0.0017737657421134 XM_002697930.3 SRRM2 PREDICTED: Bos taurus serine/arginine repetitive matrix 2 (SRRM2), 0.0 1.626e+04 100.00 0.999445737723091 XM_005255226.1 SRRM2 PREDICTED: Homo sapiens serine/arginine repetitive matrix 2 (SRRM2), transcript variant X2, mRNA. 0.0 1.110e+04 87.09 0.999889147544618 TCONS_00145932_9 sp|Q8BTI8|SRRM2_MOUSE SRRM2_MOUSE Serine/arginine repetitive matrix protein 2; 0.0 1575 71.56 0.680408609996352 1 coding 0 0 0 0 -1.21025504166744 0.0134333788072944 0.0159819555188119 0.788273450660203 GTGCTGACGTGCAACGCGGCCCAGGCGGGGTGCGAGTGGCGCAGTCGGAGCCCGCTGCGGCCCCTGAGGAAGCGAGGAGGCGGCGGTGTCGGCTGAGTCGGGCGGACAGGCGAGGCTGGGCCGCGGCTCCAGGCCCCGAAGGACTCAGGAGCTCGATCTGCGGCAGCACCTCTCCCCCTCGGAGGCGGCGGGCGGAGGCGGCGGCGGGAGCGGTGGTGCCCCCCCGGGCACGGGGCCATGTACAACGGGATCGGGCTGCCGACGCCCCGGGGCAGCGGCACCAACGGCTACGTCCAGCGCAACCTGTCCCTGGTGCGGGGCCGCCGGGGTGAGCGGCCTGACTACAAGGGAGAGGAGGAACTGCGGCGCCTGGAGGCTGCCCTGGTGAAGCGGCCTAATCCTGACATCCTGGACCACGAGCGCAAGCGGCGCGTGGAGCTGCGATGCCTCGAGCTGGAGGAGATGATGGAGGAGCAGGGGTACGAGGAACAGCAAATTCAGGAAAAAGTGGCGACCTTTCGACTCATGTTGCTGGAGAAGGATGTGAACCCTGGGGGGAAGGAGGAGAACCCAGGGCAGAGGCCAGCGGTAACTGAGACTCACCAGTTGGCAGAATTGAATGAGAAGAAGAATGAGCGACTCCGAGCTGCCTTTGGCATCAGTGATTCCTATGTGGATGGCAGCTCTTTTGATCCCCAGCGTCGTGCTCGAGAAGCTAAACAACCAGCTCCTGAGCCTCCCAAACCTTACAGCCTTGTCCGGGAGTCTAGCAGTTCTCGCTCACCAACGCCAAAGCAAAAGAAGAAGAAAAAGAAGAAAGATCGAGGACGCAGGTCAGAGAGCAGCTCTCCTCGACGAGAGAGGAAGAAGAGTTCTAAGAAGAAGAAGCACAGGTCAGAATCTGAATCCAAGAAAAGGAAGCATAGGTCTCCTACTCCAAAGAGCAAACGTAAATCTAAGGACAAGAAGCGGAAGCGATCTCGAAGTACAACTCCAGCCCCCAAGAGCCGACGGGCCCACCGTTCAACTTCTGCTGACTCTGCTTCTTCTTCAGATACTTCCCGCAGTCGGTCTCGAAGTGCTGCAGCTAAAACCCATACAACTGCCTTGACTGGACGAAGTCCTTCGCCTGCTTTGGGGCGTCGAGGGGAGGGAGATGTACCTCCCAGGGAACCAGGTACTACCAACATAGGGCAGCCTAGTAGTCCGGAGCCTTCTACAAAGCAGCCTAGCAGTCCCTGTGAAGACAAAGACAAGAAGGAGAAATCTGCAGTTCGACCTAGTCCCTCTCCGGAAAGGAGCAACACAGGGCCAGAACCACCGGCTCCCACTCTGCTCCTTGCTGAGCAACATGGCGGCTCCCCACAACCGCTTGCAACAACCCCCTTAAGTCAGGAGCCAGTGAACCCCCCTTCTGAGGCTTCTCCAGCCCAGGGTCATTCACCACCTAAGTCTCCTGAGAAACCTCCCCAATCTTCTTCAGAGAGCTGCCCACCATCCCCTCAACCTACCAAAGTTTCTCGGCATGCCAGCTCTTCCCCTGAAAGCCCTAAACCGGCACCAGCTCCTGGGTCCCGCCGAGAGAGTTCTTCTCCTGCATCCAAGAGTCGCTCTCATGGGCGAGCAAAACGGGCTAAGTCACATTCTCATACTCCTTCCCGTAGGGTGGGGAGGTCCCGTAGTCCTACCACCAATAAGAGGGGGCGGTCTCGGTCTCGAACCCCTACCAAGAGAGGGCATTCTCGGTCCCGGTCACCTCAGTGGCGTAGATCACGTTCTGCACAGAGGTGGGGACGATCTAGAAGCCCCCAGCGACGTGGCCGCTCTAGGTCTCCTCAGCGGCCAGGCTGGTCCAGGAGCAGAAATGCACAGAGAAGAGGCAGGTCTAGATCAGCAAGACGAGGCAGGTCACACTCTAGATCCCCTGCAACTAGGGGCAGATCTCGTTCTAGAACACCTGCCCGGAGAGGCAGGTCTCGGTCTAGAACACCTGCCAGGCGGAGGTCACGATCTAGAACACCCGCCAGGCGGAGGTCACGATCTAGAACACCCGCCCGGAGAGGCAGGTCTCGGTCTAGAACACCTGCTAGGCGCAGATCTAGGACCCGATCACCTGTACGACGGAGGTCTCGTAGTAGATCACCAGCCAGGAGAAGTGGCAGGTCACGTTCCAGAACCCCAGCCAGGCGTGGGCGCTCACGCTCTAGAACACCAGCAAGACGAAGTGGCCGGTCACGCTCTAGAACGCCAGCTAGACGAAGTGGCCGGTCACGCTCTAGAACCCCAAACAGGAGAGGGAGATCACAGTCTAGGACACCAGCAAGACGGGGAAGATCCCATAGTAGAAGCCTAGTTAGACGGGGAAGATCTCACTCTAGAACACCACAAAGAAGGGGCAGGTCTGGCTCATCATCAGAGCGGAAGAACAAATCCCGCACATCACAGAGAAGGAGCAGGTCCAACTCAAGTCCAGAAATGAAGAAATCGCGGCTTTCTTCTAGGCGGAGCAGGTCTCTCTCTTCACCAAGGTCCAAAGCAAAATCCCGTTTGTCTGTGAGGCGAAGCCTTTCAGAGTCCTCTCCGTGCCCTAAACAAAAGTCTCAGACACCACCAAGGCGCAGTCGCTCTGGATCATCCCAACGCAAAGCTAAATCCAGAACGCCACTGAGACGAAGTCGCTCTGGTTCTTCTCCGCCTGGTAATCAGAAATCTAAAACACCATCAAGGCAAAGTCATTCCAGTTCATCTCCTCAACCTAAAATGAAGTCTGGAACGCCACCAAGGCAAGGGTCCGTAACAAGTCCCCAGATAAATGAAGAGTCTGCAACGCCACAGAGAGGGAGCCGTTCGGAATCATCACCTGACCCTGAGGTGAAGTCTAGGACCCCTTCGAGACATAGCTGCTCTGGGTCTTCTCCTTCTAGGGTGAAATCTGGCACACCTCCAAGACGGAGCCGATCTGGGTCGTCATCTCCACAACCCAAAGTAAAGGCAGTAACATCACCAGTCCAAAGCCATTCTGGCTTCTCTTCTCCAAGTCCTAGTAGGATGACATCTAAAACACCTCCAAGGCAAAGCAGATCAGTGTCTCCATGCTCTAAGACAGAATCTAGGTTGTTGCAAAGACACAGCCATTCTAGATCTTCCTCTCCAGATACCAAAGTGAAACCTGGAACACCACCAAGACAAAGTCACTCAGGGTCTACTTCGCCGTGCCCCAAAGCAAAGCCCCAAACTCCACCAGGGCATAATCTTGGATCAAAGTCCCCATGTTCCCAAGAGAAGTCTAAAGATTCACTAGCACAGAGTTGCTCTGAATCCTTCTCCCTCTGTCCAGGAGTCAAGTCTAGCACACCACCCTCATTTCTGCAACAGAAAGGACAATCTCCAACTTCACCAGACTCCAGATCTGGTACTTCAAGCCCAGAAATGAGACCAAGTCATTCTGAGTCTCCATATCTGCAGAGCAAATCTCAAACACCTCCTAAGGGCAGCTGCTCTAGGTCCTCATCTCCAGTCGCTGAGCTGGCACCCAGATCTCCAACAAGAGGTGAATTGTCAGCAAGTCCTAGACTGAAATCCGAAATATCTCCAGAACAGAGCAGGTCCCAGTCTGACTCTTTCTCATATCCTGCCATAGACTCTAAATCTCTTCTGGGGCAGAGCAGATTAGAGCCTTCTGAATCAAAAGAAAAAACTGGCTTACTCCTGCAGGAGGATGTTAGTGCATCACCTCCAAGACTAAGAGACAAATTGAGTCCTCCTCCAGTGCAGAATAGGCCTGAGTCCTCACCAATACTCAGAGATACCCCTAGAACTCCATCAAGGGAAAGAGGTGGTGGTGTTAGGTTATCTCCAGATACAAAAGACCAAAGTTCTGCATTAGCTAAGCCAAGCCAAGATGAAGAATTAATGGAGGTAGTAGAGAAATCTGAAGAATCATCAAACCAAGTTCTGCCGCATTTGTCTCCAGAACGTAAAGAAACTGCTGGAAGTAATGTTGAATCATCTCCAGAAATAGAAAGGCCTGCTGTACCTTTGACTCTTGACCAAAGCCAGTTGCAGGCTTCTTCGGAAGAAGTCCCTGCAATGGCCTCAGCTTGGAGCGGGCCACACTTTTCTCCAGAACATAAAGAACTGTCAAACTCTCCTCCCAGGGAGAATAGCTTTGGATCACCTTTAGAATTTAGAAACTCAGGAGGCCCTGTTGCAGAAATGAATACTGGATTTTCTCCTGAGGGTAAAGATTTGAATGGACCTTTTCCTAATCAGCTAGAGACAGATCCATCTCTAGATGTGAAAGAACAATCAACAAGGTCCTCCAGACACAGCAGCTCTGAGTTATCCCCAGATGTGGTGGAAAAAGCAGGAATGTCTTCAAACCAGAGTGTGTCTTCACCAGTACTTGATGCTATACCCAGAACACCTTCAAGGGAAAGAAGTAGTTCTGCATCTTCTCCTGAACTGAAAGATGGCTTACCCAGAACTCCCTCAAGGAGAAGCAGGTCTGGGTCTTCCCCAGGACTTAGAGATGGATCTGGGACTCCTTCCAGGCACAGCCTATCTGGGTCGTCTCCCGGAATGAAAGATATACCTAGAACACCATCCAGGGGGAGAAGTGAATGTGATTCCTCTCCAGAACCAAAAGCTTTGCCTCAGACTCCTAGGCCAAGGAGTCGTTCTCCATCTTCCCCGGAGCTCAACAATAAGTGTCTTACCCCTCAGAGAGAGAGAAGTGGGTCAGAGTCATCAGTTGAACAGAAGACTGTGGCTAGGACACCTCTTGGGCAGAGACGTCGGTCTGGATCTTCTCAGGAACTCGATGGGAAACCCAGTGCATCCCCTCAGGAGAGAAGTGAGTCAGACTCTTCTCCAGATTCTAAAGCTAAGATACGAATGCCACTCAGGCAGAGGAGTCACTCTGGATCCTCTCCGGAGGTGGACAGCAAATCCCGGCCTTCTCCTCGGCGTAGCAGGTCTGGCTCATCCCCTGAGGTTAAAGAGAAGCCAAGAGCAGCACCCAGGGCACAGAGTGGTTCTGATTCCTCTCCTGAACCCAAGGCTCCTGCCCCTCGAGTCCTTCCAAGACGAAGCAGATCAGGTTCATCAAGCAAAGGCAGAGGCCCTTCTCCTGAAGGAAGCAGCAGTTCCGAGTCCTCTCCAGAACACCCTCCCAAATCCAGAACTGCTAGAAGAAGCTCTCGGTCATCACCAGAGCCCAAGACTAAGTCTCGTACTCCGCCGCGGCGTCGCAGCTCCCGGTCATCTCCTGAGCTGACTAGGAAGGCCCGGCTCTCCCGTAGGAGCCGTTCTGCGTCATCCTCACCAGAGACCCGCTCTAGAACTCCCCCAAGACGCCGAAGAAGTCCCTCAGTGTCTTCCCCAGAGCCGGCTGAAAAGTCAAGATCCTCACGCCGGCGGCGTTCAGCATCCTCTCCACGCACTAAGACAACTTCAAGGAGAGGCCGTTCTCCTTCACCAAAGCCTCGTGGGCTCCAGAGGTCCCGTTCCCGCTCGAGGAGGGAGAAAACCAGGGCCACTCGACGTCGGGATAGGTCTGGATCTTCTCAGTCAACCTCTCGGAGAAGACAGAGGAGCCGGTCGAGGTCTCGGGTTACTCGCCGTCGGAGGGGAGGCTCTGGTTACCATTCAAGATCTCCTGCTCGGCAGGAGAGTTCCAGAACCTCCTCTCGACGTCGCAGAGGTCGCTCTCGGACACCCCCAACCAGTCGGAAGCGTTCCCGCTCACGCACATCACCAGCACCGTGGAAACGCTCCAGGTCTCGGGCTTCTCCAGCTACCCACCGGCGATCCAGGTCCAGAACACCCCTGGTTAGCCGAAGGAGGTCCAGGTCTCGAACCTCACCAGTCAGTCGGAGACGATCCAGGTCCCGGACATCAGTGACTAGACGAAGATCCCGATCAAGAGCTTCGCCCGTGAGTCGAAGGCGATCTAGGTCCAGAACACCACCAGTAACCCGCCGACGTTCAAGGTCGAGAACACCGACCCGCCGGCGTTCCCGTTCTAGAACGCCACCAGTGACTCGAAGAAGGTCCAGATCTAGGACTCCACCAGTAACCAGAAGGCGATCTCGAAGCCGAACCTCCCCTATCGCTCGCAGAAGATCGAGATCCAGAACATCCCCAGTCACCCGAAGGAGATCACGATCTCGCACTTCTCCAGTAACTCGAAGGAGGTCTCGCTCGCGAACCTCTCCAGTGACACGCCGCCGATCGAGGTCCCGAACTCCTCCAGCTATTCGGCGCCGCTCCAGGTCTCGAACCCCATTGCTGCCACGAAAGCGCTCTCGAAGTCGCTCGCCACTTGCTATTCGCCGCCGTTCCCGATCCCGTACTCCACGAACAACTCGGGGCAAACGGTCCTTAACAAGATCTCCTCCGGCCATCCGCAGGCGTTCTGCCTCTGGAAGCAGTTCCGATCGATCACGTTCTGCTACTCCTCCAGCAACAAGAAACCATTCTGGTTCTCGGACACCTCCTGTAGCTCTCAATAGCTCCAGAATGGGCTGCTTCAGCCGTCCTAGCATGTCACCAACTCCTCTTGACCGCTGTAGGTCACCCGGAGTGCTTGAGCCCCTCGGCAGCTCCAGAACACCCATGTCTGTCCTGCAGCAAGCTGGCGGTTCCATGATGGATGGTCCAGGTCCCCGAATTCCTGATCACCCGAGAGCATCTGTACCTGAAAACCATGCTCAGTCAAGAATTGCACTTGCCCTGACGGCCATCAGCCTTGGCACTGCTCGGCCGCCTCCGTCCATGTCTGCCGCTGGCCTTGCTGCGAGAATGTCCCAGGTTCCAGCTCCAGTGCCTCTCATGAGTCTCCGAACGGCCCCTGCAGCCAGTCTTGCCAGCAGGATCCCTGCAGCCTCTGCAGCAGCCATGAACCTGGCCAGCGCCAGGACACCTGCCCTCCCCTCAGCAGTCAACTTGGCTGACTCCAGAACACCAGCTGCAGCAGCAGCCATGAACTTGGCCAGCCCCAGAACAGCGGTGGCACCTTCGGCCGTGAACCTCGCTGACCCTCGTACTCCCACAGCCCCAGCTGTGAATCTAGCAGGAGCCAGAACCCCTGCTGCTTTGGCAGCTCTGAGTCTCACGGGTTCTGGCACAGCTCCAACTGCTGCAAACTATCCGTCCAGCTCCAGAGCACCCCAGGCTCCAGCCCCTGCAAACCTGGTGGGTCCTAGGTCTGCACATGCCACAGCACCTGTGAATATCGCCAGCTCAAGAACCCCTCCAGCCTTGGCCCCTGCAAACCTCACTAGTGCTAGAATGGCTCCAGCCTTGTCTGGTGCAAACCTCACCAGCCCCAGGGTGCCCCTCTCTGCCTATGAGCGTGTTAGTGGGAGAACCTCACCACCACTCCTTGACCGAGCCAGGTCCAGAACCCCACCAGGGGGCCCAGGCTCCAGAACCCCGCCATCTGCCCCAAGCCAGTCTAGAGTGACCTCTGAGAGGGCTCTGTCTCCTGCTTCTAGAATGGTCCAGGCTCCCTCACAGTCTGCTCTTCCTCCAGCTCAAGATCGGCCTAGGTCCCCTGTGCCATCTGCTTTTTCTGACCAATCTCGATCTTTGCTTGCCCAGACCACCCCTGTAGCAGGGTCGCAGTCCCTTTCCTCTGGGACGGTGGCAAAGACCACGTCCTCTGCTGGTGACCACAATGGCATGCTCTCTGGCCCTGTCCCCGGGGTGTCCCACCCAGAGGGTGGGGAACCACCCGCCTGTGCGGGGGCCCAGCAGCCTTCCACACTGGCTGCCCTGCAGCCAGCCAAGGAGCGGCGGAGTTCCTCGTCCTCCTCGTCCTCCAGCTCCTCTTCCTCCTCGTCGTCGTCCTCGTCGTCCTCGTCCTCCTCCTCTGGCTCCAGCTCTAGTGACTCGGAGGGCTCTAGCCTTCCTGCGCAACCTGAGGTAGCACTGAAGAGGGTCCCCAGCCCTGCCCCAGCCCCCAAGGAGGCTGTTCGAGAGGGCCGTCCTCAGGAGCCAGCCCCAGCCAAGCGGAAGAGGCGTTCTAGCAGCTCCAGTTCCAGCTCCTCCTCCTCCTCTTCATCATCCTCCTCCTCTTCCTCCTCCTCTTCTTCCTCCTCCTCCTCCTCTTCCTCATCCTCTTCTTCCTCCTCTACTTCTTCCTCTCCCTCCCCTGCTAAGCCTGGCCCTCAGGCCTTGCCCAAACCTGCAAGCCCCAAGAAGCCACCCCCTGGCGAGCGGAGGTCCCGCAGCCCCCGGAAGCCAATAGACTCCCTCCGGGATTCCCGGTCCCTCAGCTATTCGCCTGCTGAGCGCCGCCGCCCCTCACCCCAGCCCTCGCCGCGGGACCAGCAGAGCAGCAGTGAGCGGGGTTCCCGGAGAAGCCAGCGTGGGGACAGCCGCTCCCCAGGTCACAAGCGCAGAAAGGAGACGCCCAGCCCCCGCCCTGTGCGGCACCGCTCCTCAAGGTCTCCGTGAATCCTTTCAGGGGAATTCCATCCTGCCCCAAGTTCTGGAGCTGCGGGGCATGCCCTTCTTTTTTCCCAACAGAGCTGGGGGAAGGGGTCCTTGTCTGCCTTCCCCCCCAACCCTGGCAGCATCCCGTTGGGGAGGGCTCCCTTATTTCCCTCCCTCCTTTTTTTCTTTGTTCTGTGAAATGTTAATCTCTGTGAGTTTTTCCTGGTTCACATGTTTTGGGGGGTTTGGGGTGGGTTGGGAATGAGAATGGGATTTGTGGGAGGGGAGGATATGGTTTGGGACTCCCAGGTTTTGACTCAGAAAGGACTTCGGAGGCACTGCCCCCCTTGAACCCCGAGTTCCTGCGGGGGGGGATGATGGTTTGGAACTTGTGGACCTGTGTGAGTTACACCCAGAAGGAAGGGGAGTTGAAATCAGTTGGCTCCTCCTGGCCTCCCAGTGAGGTTGTGGCCCCTCCCCCCCAACTTTTCTTCACGTTTCTTAAAGGCATTTTGGTTTTTTAAAATCTGTACAGCAAGAGCAACTTTTTCTGTCAAATAAAAATGAGAAATGCAGGAA EMBV3_06066 TGATTCTGGAGGTGAATGGGTATCCCATGGGTGGAGAGAAAGACCAGGAAAGACTTCAGC Gene GeneID:539171|PDZD3:NM_001034664:187_cdna UTR3_Alt 2 NULL GeneID:539171 15 GENE PDZD3 MGC129076 PDZ domain containing 3 EMBV3_19165 TGTGCACTGCATTTTCTCCTGTAAACCGAAAGGGGTTACTAAGCAGAACCAGCCAAATGC Gene GeneID:519624|STX16:XM_002692416:382_cdna Constitutive 2 NULL GeneID:519624 13 GENE STX16 NULL syntaxin 16 EMBV3_05868 GCCTTAACTCGCCATTGATTTACCAGTTTAACGTCTCCCGGGGTTTCTTTTCCCACGGAG Gene GeneID:508065|ZNF362:XM_002685605:242_cdna Constitutive 0 NULL GeneID:508065 2 GENE ZNF362 NULL zinc finger protein 362 EMBV3_03143 GGGAGATAATCAAGTATTTATCCTGCCTTTCCTGGATGAACTGGGTAGGTGAAGGGACAT Gene BVT0102_327975 + 0 NULL GK000030.2:84618963-84657968 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02894 AACCCTGGAGCCGGCTGCGTGTGTTCTTCAAATCAATTCCCCCTTCTACCTTAGCCTTGT Gene GeneID:524779|DTX3:NM_001105393:1058_cdna Constitutive 0 NULL GeneID:524779 5 GENE DTX3 NULL deltex homolog 3 (Drosophila) EMBV3_11376 TGGGAACATCCCTCTCCTTGCCTCCACTTTCCCAAGGTAAACCCCATCCTGAAATCTCTA Gene BVV0102_171320 + 0 NULL GK000016.2:49303514-49332768 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067418 1 XLOC_041442 NonCoding TCONS_00067418 XLOC_041442 NonCoding NonCoding LOC100848765 16:49312718-49315014 = TSS50703 907 1 TCONS_00067418_1 95 2 0.605664488017429 0.000360018925581701 0.000243732764968081 0.000438724078857717 0.000943028551563826 8.16512116638528e-05 0.000295787057913112 0.000360061360831228 0.000710809856888723 0.000565445987354171 8.16546512410404e-05 0.000436634647460697 3.94233387531714e-06 0.00185380258050688 0.000150403616129391 3.44646996902775e-05 0.0295565385602735 0.0121298666209788 0.0269305554154339 0.000948744895196888 0.000880098104531887 0.00116141152799251 0.0145713407230467 0.00853682915252682 0.0131233682004988 0.00129861100207375 0.00017866129907199 0.000335915705237204 0.00207564505367622 0.00354327387478148 0.00375848481675559 NR_073080.1 PHLDA3 Homo sapiens pleckstrin homology-like domain, family A, member 3 (PHLDA3), transcript variant 2, non-coding RNA. 6e-35 152 78.24 0.230429988974642 0 noncoding 0 0 0 0 -0.385756363262344 0.102003168554427 -0.0455062316263484 0.494149830567446 GATTCACGGGAGGCCCGCCTGGGGCCCCCGNGNCGANCCCCCCAGGCTCAGCTCCCTCTTCAGGGAGGCCCACTCTTGGGGTCGTCTGCTGCTTGGGTCCTTTTCGGGACCCCCACCCCTCCAGGCCCCTCTTTGAAGGTTCTTCCCCCCTCCTGCCCATCTTCCCCGCACTGCCGTGCCAGGCCTGGAGGTGGTGGGGTGGGTAGAGGCTCAGCCATTACCATTTCACACCTGTCCCAGAATCTGATACCCTGCAGAGGGCAGTGACCACGCTGTTCTCCGAATGAGAGTCTTTCCCACAAAGACCTGGTATTGGGAACATCCCTCTCCTTGCCTCCACTTTCCCAAGGTAAACCCCATCCTGAAATCTCTAGCCTGGGGAGGCAGAGACCCTGCAATCCAGAGAACACAGCCTCAGAGGTGCTGGAGGAGGGACCCTGGGGCCTGCATAGGCCACTGTGGCCTCTGCTGTCCTCCTGGGAGGCAGCCGTGTCTCCCCAGTGGGGCTCGTCCCTTCGTCACTCACACACTTGGGCCTGCTCCACTGACATCACAAGTCTTCTCCACGTGATGGTTTAAAAGGAATCGTTTCAGCAGCAGAGAAATGGAGGTGGAGACAGCGCTACCCTGAGTGACACAGGGACGGCCCGTTGGCTGACCCACGTCCGGCCTGCCCTGTTGCCGTGTGGCGGCTTCAGAGTCCGATGGGGCAGGGAGGCCGAGTGTCCACCACAGGGGTCTGGAAGCCGCTTCCAGCCCTCTTGCTCCCCGCAGGCTCCTCCTCCCATCCGGTTACGACTCCTGTCCTTTGTCCCCGTCCCCCAGAGCCCTCTGCAGCTTCTCTTTTCTCCAATATGTGAACCTCATCTTACAATTGAATAAGAACTTAAGGTACAAAGACACTTTT EMBV3_06279 TCTGGTGGGTATGTTCTCTGACCATTCTTCTGTAAAAGAGGGCTTCTGGCTGATGGGCAG Gene GeneID:617160|PXMP4:NM_001099163:1312_cdna Constitutive 0 NULL GeneID:617160 13 GENE PXMP4 MGC160062 peroxisomal membrane protein 4, 24kDa EMBV3_15481 GCTACCAAGATGTTCTTCAATAGCTTTCCAGGGGCTGAAGCAGAATGGTGGCTGAGAACC Gene BVT0102_077328 + 1 EMBV3_13755 GK000010.2:25882287-25920426 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42788 AGACACCCAGCGGCCCCCCAAACTAGTCAATGTTGTGTCCTCTGAACCAGTTTTTCCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29855 CGGGGTGTGGTGAGGAAGAGCCGAGAATGGGTCCACGGGGACCCCCCGGGCAGAAGCTGT Variant GeneID:513878|WBSCR22:NM_001034457:170_cdna 780^884 3 EMBV3_06646 GeneID:513878 25 GENE WBSCR22 MGC133842 Williams Beuren syndrome chromosome region 22 protein EMBV3_30679 CAAGGCAGATGAGCCTCTGTTTACAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGA Gene GeneID:532835|AZIN1:NM_001082611:26_cdna UTR3_Alt 2 NULL GeneID:532835 14 GENE AZIN1 MGC143073 antizyme inhibitor 1 EMBV3_18932 CAGATAACTGACCGCTGATTTCTTCCTTGCCTCAGCACGTTCATCAGTAGGACTCTTCTA Gene GeneID:282229|FCGR2:NM_174539:197_cdna Constitutive 1 NULL GeneID:282229 3 GENE FCGR2 CD32 FCGR2B MGC137852 Fc fragment of IgG, low affinity IIb, receptor (CD32) EMBV3_06670 AGTGGTGGTGATACAGGAGGGGAATTCATTAAAAAACACCAAACCATAGAAAGCTACCAC Gene BVT0102_057875 + 0 NULL GK000020.2:10425914-10431451 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113296 TCONS_00114505 TCONS_00114507 TCONS_00113297 TCONS_00114506 2 XLOC_069000 XLOC_069303 Coding TCONS_00113296 XLOC_069000 NonCoding NonCoding CCNB1 20:10428467-10431548 x TSS84783 2607 3 TCONS_00113296_1 54 0.188722669735328 2 0.154220779220779 0.0148059686625829 0.0424824185982803 0.0110417285590927 0.0163876303048989 0.01926825345891 0.0075275554747599 0.00883311582932682 0.0185996255659766 0.0171264418511341 0.00524523731342533 0.00178404577631295 0.00222163643804699 0.00211300258307569 0.00451588021397572 0.0131483372520863 0.000526937277759032 0.000227224411726147 0.0287732861084494 0.0218417852804813 0.0326729573102321 0.00926326913059152 0.00206418515933613 0.000372212231472892 0.00509509974578959 0.0224413852760292 0.0213855504974011 0.0111579248574697 0.0011411195281476 0.00059769628485931 0.00358878812663258 XM_002701839.3 CD22 PREDICTED: Bos taurus CD22 molecule (CD22), transcript variant 1, 2e-46 192 91.30 0.0525508247027234 XM_005248626.1 CCNB1 PREDICTED: Homo sapiens cyclin B1 (CCNB1), transcript variant X1, 3e-82 311 74.96 0.203682393555811 0 noncoding 0 0 0 0 1.523375661038 0.0340931487950233 -0.125717217829071 0.0926545139265188 GGAAACATGGGTTCAGATCCCTGGTTCAGAAAGATCCCCTGGAGAAGGGCAATGCAACCCACTGCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCGGGGTACAGTCCATGGGGTCACAAAGAGCTGGACACGACTACATGGACTTCTCCAATGAAATAAGAAAACACCAACATATAGGTGTCTGACAAAAAACAATAAACTTAAGAAAATAAGCAGTAAAATAATCTCCAGATCAAAAAGGATTACAAAAGAAATTCTAAAAACCATATTGATGAAAAAGAGAACTTTACAAATGAGTTATCTCAGAGGAAAATGTATATACAAAGGCTTTTATTACTAAAAATACATTGAGTATTTAACTAGAAAATAACTGAGAAAAGCAGACGGTGAGAATTAACATTTGGTAGCTAAAACTACCAGAGGTGGTAGAAATGATAACACCAAAAACTGATTCTTTCAAAACACCAATAATACCCTCTAGGCAAGCATGATTAGAAAACACAAGTATTCAACATCAGAACTAAGAAGATATAACTATAATACAGAAGAGGTTAACTAATATCCTATACCTCTACAGCTATAATTAAAATCTAGAATGGATGATTTTCTTTTAAAGTGGTGGTGATACAGGAGGGGAATTCATTAAAAAACACCAAACCATAGAAAGCTACCACTATAAGCACAGGCCAGGTGACTTTACATATTGATTTAGCTAGTTTTCAACAAATGAATAAAGATTTCAAATTATAACACTTGAATATGAAAACCTCTTTAATCCACATTAAAGCTGGTAGATGAGATAAAAATTAGAAATTGACAAGAAAAGTGTAGCAATTACATAATTAAATTCTAACACTGCAGTGAAGGGCATGCAACAAGCCTTACTGGAGAAGTTTCTGAATGGAAGACAATGTCAGTCTATCCAGAGCTAACACATATGTATGTATACAACATTCAGTCAAAATTTAAAAGCGCTTATCAGTAACTGCAAAGTTCCTCTTTGAAATTTTCCCCACAAATATTTGAAAAATAGTGGTAGCCTCATCTTTCCAGATAAACTTAATGTAAAACTATATTAATCACAGGGAAAAAGTAGATCAGGGAACAATAAACTAGTGTTTCAACTGTCCAAGGGGGGGGTTTAAACATATGGTACTGGCACAAATGGGTATCCATCTGCAAGTTAAGAGTCCTACCTCATACCACATACAAAAAGTTTAACTGAGGGCTTACACACCTAACAGGAAAAATTTAGAAATTTAAGAGATATTAATGGTTTGGGGATGGAATTGAACTTAACACTGAAAATCTAAAAGCAACTACAAAAAATATATATCTAGTAAGACCCAAGTTTAAAACTGTCTGCAAGGAAAAAACAGCATAATCAGATTCAGGGCAAATGACAAAGTGGGAAAGCTTTTACAAATTGTTAACGACAACAAAAATTGATTCAACTAGTCATGAAAAGTATAAGTTAAGACAGTAAACAAAATAGGGTATTTTTTGCCACAAAAAAAGTCACAGAAACTAAAGTGAATGATTAGCTTCAGTTCAGGCACAGATGCTGAGAAAACCAGAACTTTTGTACATTTATTGCTGATGACATTGAGAACGTCAGCTGGCTACACCGGCCAGAACTTAGAACACACATTCTTTGGAGAACTCAGTCAATGTACATAAAGGAAAGTATGGGATATAATGACATTTAAACAGAATTGTCTATAGGAACAAAGAGAAAAAGCAATCTGAATGTAAACAGAGGGACGGTTAAATACATTATAACATATCCATACAATGGACTGTAATGCCCAAATACAGGTAAGGCCTGTCCATGTTGAAATGAATTGCCAAGTATACAAAATGACCCCATTTTTAATACATCCCATAATACTACATACACAGGTCTATGCACATATTCATGGATCGATACACTCCTAACTCCTTATATCCTTCACATGCGACTGAGACAGGACAGTAAGAACAGGTGGGTAAATAAAGTTTTTAAGATACTTTCATATTTAAGGAGTGTTTTATTTTCTTAACTAATGAACAAAAACTAGGCTTTGAATATAAATTAAAATTCTTATTTTTCCAAGTGAAAATGCTGATACTAGCTAAAGTTGATAATTTAAGAAAGTGGTACTAGGAGATTACTTAGAATTATGGTAGCAACCACCAGAGTAAATAGGAATCAGGAGGACTAGGAATGAAATGGTAGACTTTTCCTTATGTAGAACTAGGCAGCAGAATTTCTTAAGGTGACTTGGGCTTACATACAGTATGACATGTAAAGTACATCTAGATTTTAAGTGCCTTCAAGAGCTTAGTAAATCATCATAAGTAAAGCCAGGCATATAAAAAAAAACCAAGAAGAACCAATTGTATGTATTAGTTGGGTCCCCAGGTAACTGAAAACTGTTTTTAAGCAATCCCCACCATACCTTTAAAACAACTTTTATCCTCAAGCGCAAAGTAGCCACATTCAAATAGTTAAAGGATAAGTAAAAAGAACTTCAACTTTATTAAAAGTAAATAAATGTAACATATAATATGTACAGATGGCACATGGTGCCAATTTTATTTGCAGGTAGTATT TCONS_00114507 TCONS_00114508 r 5' 0 TCONS_00114507 TCONS_00114508 r 5' 0 EMBV3_43652 ATGCCCACGAGATTCCATATCAACCAGCCTGTGGATAGGCATGTGGACCTGCTAGAAGTT Variant GeneID:506045|ATAD1:XM_002698369:155_cdna 855^905 4 EMBV3_39988 GeneID:506045 26 GENE ATAD1 NULL ATPase family, AAA domain containing 1 EMBV3_40961 CTTCAGGAAGAAGACAAGGGTGCCCACTCTCACCACCACTATTCAACACAGTTTTGGAAG Gene BVV0102_256412 + 1 EMBV3_25904 GK000018.2:58755694-58791961 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250313 TCONS_00072336 TCONS_00089492 TCONS_00231833 TCONS_00251853 5 XLOC_153256 XLOC_044105 XLOC_054276 XLOC_141321 XLOC_154794 Coding TCONS_00251853 XLOC_154794 Coding Coding - X:71884406-71887703 - TSS189074 3297 2 TCONS_00251853_2 296 1.00121322414316 1 0 0 1.01591663842122e-06 0 0 0 2.71235938648249e-07 3.7144670925965e-06 1.37997882211747e-07 7.37879570555602e-06 0.000380791242574658 0.000386763754805226 0.000393569902040478 2.90090081391977e-07 2.6553356094091e-06 1.62622044508073e-05 0.000213955096623225 3.77567897204164e-05 9.09576946097551e-05 2.17498530122645e-06 2.72650843461878e-07 4.60377335117703e-07 6.40361154256619e-05 0.000474920858939748 0.000244297124727468 2.80193557607273e-06 4.71906603543248e-06 4.44279112108911e-07 7.54546825561577e-05 0.000151257333169164 0.000182263773176644 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 0.0 847 75.82 0.369426751592357 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 1371 70.16 0.969669396420989 TCONS_00251853_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 8e-131 405 74.62 0.95985401459854 1 noncoding 0 0 0 0 -0.271623017177149 0.0882678982751602 -0.0422734889707435 0.390526939682076 CTTATTGCATTATTCATTATATATTGACTCTTTTTTAATTTCTTCTAGGTCCTTGTTAAACCTTTCTTGCATCTTCTCAATCCTTGACCCCTACATATGTTGTCTACAAGAGACCCACCTCAAAACAGGGGACACATGCAGACTGAAATTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATAACAGACAAAATAGAATTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACAGAGGAGCACCACAATATGTAAGAAAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAATACAATAATAGTGGGAGACTTTAATACCCCACTCACACCTATGGATAAATCAACTAAACAGAAAATTAACAAGGATACACAAACTTTAAATGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCATGCCAAAAAATGAATTTCAGCTTTTTCTCAAGCACACACAGAACCTTCTCCAGGATAGATCACATCCTGGGCCACAAATCTAGCCTTGGTAAATTCAAAAAAATTGAAATCATTCCAAGCATCTTTTCTGACTACAATGAAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAAAAACACACTGCTGAATAACCAACAAATTACAGAAGAAATTAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAAGGAAAACACAACAACCCAAAACCTGTGGGACATGGTAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAATTGAACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCACGGTTAGTAGAAGGAAAGAAATCTTAACAATTAGGGCAGAAATAAATGCAAAAGAAACAAAGGAGACCATAGCAAAAATCAACAAAGCTAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAAAAAAATCAAATCTATAAAATTAGAAATGAAAATGGAGACATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAGCAATTATATGCCAATAAAATAGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAATTATAATCAGAAATCTTTCAGCAAACAAAAGCCCAGGTCCAGATGGCTTCACAACTGAATTCTATCAAAAAACTTAGAGGAGAGCTAACACCTATCCTACTCAAACTCTTCCAGAAAATGGCAGAGGAAGGTAAACTTCCAAACTCATTCTATGAGGCCACCATCACCCTAACACCAAAACCTGACAAAGATCCCACAAAAAAAGAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAAAATCCTTAACAAAATTCTAGCAATCAGAATCCAACAACACATTAAAAAGATCATACACCATGACCAAGTGGGCTTTATCCCAGGGATGCAAGGATTCTTCAATATCCGCAAATCAATCAATGTAATACACCACATCAACAAATTGAAAAATAAAAAACATATGATTATATCAATAGATGCAGAGAAAGCCTTTGACAAAATTCAACATCCATTTATGATAAAAACTCTCCAGAAAGCAGGAATAGAAGGAACATACCTTAACATAATAAAAGCTATATATCACAAACCCACAACAAACATTATCCTCAATGGTGAAAAAATGAAAGCATTTCGTCTAAAGTCAGGAAGAAGACAAGGGTGCCCACTTTCACCACTACTATTCAACATAGTTTTGGAAGTTTTGGCCACAGCAATCAGAGCAGAGAAAGAAATAAAAGCAATCCAAATTGGAGAAGAAGAAGTAAAACTCTCACTGTTTGCAGATGACATTATCCTCTACATAGAAAACTCTAAAGACTCCACCAGAAAATTACTAGAACTAATCAATGAATATAGTAAAGTTGCAGGATATAAAATCAACACACAGAAATCCCTTGCATTCCTATACACTAATAATGAGTAAATAGAGAAATTAAAGAAACAATACCATTCACTATTGCAATGAAAAGAATAAAATACTTAAGAATATATCTACTTAAAGAAACTAAAGACCTATATATATATATATAAAACTGTAAAACACTGGTGAAAGAAATCAAAGAGGACACTAATAGATGAAGAAATATGCCATGTTCATGGATTGTAAGAATCAATATAGTGAAAATGAGTATACTACCCAAAGCAATCTATAGATTCAATGCAATCCCTATCAAGCTACCAACGGTATTCTTCACAGAGCTAGAACAACTAATTTCACAATTTGTATGGAAATACAAAAAACCTCGAATAGCCAAAGCAATCTTGAGAAAGAAGAATGGAACTGGAGGAATCAACCTGCCTGACTTTAGGCTCTAATACAAAGCCACAGTCATCAAGACAGTATGGTACTGGCACAAAGACAGAAATATAGATCAATGGAGCAAAATAGAAAGCCCAGAGATAAATCTGTGCACCTATGGACACCTTATCTTTGACAAAGGAGGCAAGAATATACAATGGATTAAAGACAATCTCTTTAACAAGTGGTGTTGGGAAAATTGGTCAACCACTTGTAAAAGAATGGAACTAGAACACTTTCTAACACCATACAAAAAATTAAACTCAAAATGGATTAAAGATCTAAACGTAAGACCAGAAACTATAAAACTCCTAGAGGAGAACATAGGCAAAACACTCTCCGACATACATCACAGCAGGATCCTCTATGACCCACCACCCAGAATTTTGGAAATAAAAGCAAAAATAAACAAATGGGACCTAATTAAACTTAAAAGCTCCTGCACAACAAAGGAAATTTTAAACAAGGTGAAAAGACAGCCTTCAGAATGGGAGAAAATAATAGCAAGTGAAGCAACTGACAAACAACTAATCTCAAAAATATACAAGCAACTCCTGCAGCTCAATTCCAGAAAAATAAATGATCCAATCAAAAAATGGGCCAAAGAGCTAAATAGACATTTCTGCAAAGAAGACATACAGAGGGCTAACAAACACATGAAAAGATGTTCAACATGGCTCATTATCAGAGAAATG TCONS_00244704 TCONS_00244705 TCONS_00244706 TCONS_00244708 TCONS_00244709 TCONS_00244710 TCONS_00244711 TCONS_00244712 . 3' 77706 TCONS_00244704 TCONS_00244705 TCONS_00244706 TCONS_00244708 TCONS_00244709 TCONS_00244710 TCONS_00244711 TCONS_00244712 . 3' 81002 EMBV3_19528 GGGAGGAGAAGTTCAGGAAACATCCAAGAAGAATGTCCTTAAAGCAATTGAGCAGGCTGA Gene GeneID:616331|AP1S2:NM_001040591:35_cdna UTR3_Alt 2 NULL GeneID:616331 X GENE AP1S2 AP1S1 MGC128457 adaptor-related protein complex 1, sigma 2 subunit EMBV3_43460 TCAGTGGAGCCCACCCAGCCAACCCCCCAGTGAGAGAGAACAACTGGCCGCCCCTGCCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07913 AATGCCACTGAAAAAAGAGACGGTCCCAGACGTAAGTCCTGACCAAACACCTCTAGTTGC Gene GeneID:524144|KCNU1:NM_001163249:82_cdna Constitutive 0 NULL GeneID:524144 27 GENE KCNU1 NULL potassium channel, subfamily U, member 1 EMBV3_06200 ACTGCAAGTGCTTGTACATTTCTTAGGGACCTGGCGCTTTTGACTGTGGATCAGTTGATG Gene GeneID:784326|UBE2E2:XM_002698758:25_cdna Constitutive 0 NULL GeneID:784326 27 GENE UBE2E2 NULL ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) EMBV3_24181 AGACCGACACAGTGGTGTGGAACGAGATCCACCACAAGACCGAGATGGACCGTAACGTGA Gene GeneID:532767|DTX2:NM_001017945:251_cdna Constitutive 0 NULL GeneID:532767 25 GENE DTX2 NULL deltex homolog 2 (Drosophila) EMBV3_18340 GCCAGAAATAATGGAGGAAATTGTGATGGAAACACGCCAGAGGCTTTTGGAACAGGAGGG Gene GeneID:615712|EXOSC2:NM_001046561:202_cdna Constitutive 2 NULL GeneID:615712 11 GENE EXOSC2 MGC137660 exosome component 2 EMBV3_29254 GTGGTCAGCCTGCTCTCTGTAAAGTACTGGAGCAGGTACCGGGCCACAGCCATGGCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01613 TTCTCCTGGGAAGACAGCAGAAAACAAAGCAGAAGATGTCCCTGCCCTCAGGAAGGTTGC Gene BVT0102_031881 + 0 NULL GK000011.2:22109205-22366048 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024371 TCONS_00024370 TCONS_00024374 TCONS_00024376 TCONS_00024379 TCONS_00024372 TCONS_00024375 TCONS_00024373 TCONS_00024368 1 XLOC_014492 NonCoding TCONS_00024375 XLOC_014492 NonCoding NonCoding - 11:22202946-22438882 - TSS17907 565 1 TCONS_00024375_1 63 0.224778761061947 4 0.997622226460678 0.00186154715399008 0.000333109447431485 0.000822232216249549 0.000388664983482374 0.000748608555043057 2.13034132833951e-66 4.63303247231963e-08 1.91605958950308e-15 0.000509637535772333 1.63625542102696e-13 9.67831225556983e-32 1.76872558645321e-33 1.78863915817148e-05 3.55211381976053e-76 0 0 0 0 0.00227216528877064 0.000261908473157692 0.000643196542700387 0 0 0 0.000522057327827942 0.000368052486004777 0.00375407317782286 6.81676338034752e-25 1.23504218873102e-11 1.94038813180685e-21 XR_227033.1 LOC101905674 PREDICTED: Bos taurus uncharacterized LOC101905674 (LOC101905674), 5e-65 251 100.00 0.244247787610619 0 noncoding 1 0 1 1 -0.431410853126338 0.127830530955073 0.0627986614401746 0.220177799903203 CTTTTTAGCCTTCTGTCGTGGGTCAGGAGAACAGTGCAGTTCTAATAATGCTCTGCTCTCTCTGCAGCTGGCCCCAAGCTGGTTCTCTGCACTTGGAGCACCACTAAAGAGAGAGATTTGTGGAAAAGGGCCCCAGGCACACTGGGTCTTAGCTCTGTTTTGGAATGTTTGTGGTGACAGTTACTTCCGAAGCCTTAATTCTGAACTCAGTCTTCTGCAAGCTCTTCGGTTAGCACCCCAGGCCATGGAGACGTCTGCCCCCCACAAGGAAACAGACTTTGTAGGTCTAGATACTTCGTTCATTCATACTACGTGGCAGCCACAATTTCTCCTGGGAAGACAGCAGAAAACAAAGCAGAAGATGTCCCTGCCCTCAGGAAGGTTGCAGTTCAGTCAGGGTGGAGAGAAGGAGCAAGTCAACAAAAAGTTGAAATGACAACTTTTGGTAAAAAGAAGATTGAAAACAGCACTTAATTTACTGTGCATAAAAGGTGGAATACCAACAGGACCAACTGACTCTTGACACACACTGATGGAAGACAATGAACATGATTAGAAGTGATAG TCONS_00027225 TCONS_00027226 TCONS_00027227 TCONS_00027228 TCONS_00027229 TCONS_00027230 TCONS_00027231 TCONS_00027232 TCONS_00027233 TCONS_00027234 r 3' 133 TCONS_00027220 r 5' 93726 EMBV3_14561 TCCAGGGAATCCATGTCTACCTGAAAGAGAAGGAATACAGTGACTGCGCCTGGGAAATCG Gene GeneID:618801|LOC618801:XM_002689509:116_cdna Constitutive 0 NULL GeneID:618801 8 GENE LOC618801 NULL similar to interferon-tau EMBV3_40416 CAACAGTGCATTAGATATCAAAGTTTTGACTCAGCCCTCCCAGTCAGCTGTGAGAGGGGG Gene BVT0102_044375 + 0 NULL GK000004.2:48575847-48786744 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183920 TCONS_00183922 TCONS_00183919 TCONS_00183921 1 XLOC_111236 Coding TCONS_00183920 XLOC_111236 Coding Coding COG5 4:48576726-48852208 = TSS137080 2687 1 TCONS_00183920_5 829 23 0.990329641608677 0.00269671253097658 0.000916695509271862 0.00325014792961307 0.00136369887811674 0.00107290922553885 0.00020944845115353 0.000833295350781952 3.59464492367826e-05 0.0014729168674134 1.61598446134551e-36 4.13987574661239e-05 2.80852290206503e-05 6.953442893164e-05 0.000352447954789985 7.7946621816539e-16 0.00201499380461889 8.97040402116056e-05 0.00165436913356763 0.00261602695669699 0.00312902294707865 4.08505833893042e-42 0.00033245529685089 6.68988698844338e-41 4.29358385402242e-15 0.00194992934844932 0.00345867829902259 0.00165162033602856 0.000222973823420297 1.31234464452708e-26 4.2464772070775e-16 XM_003582082.2 COG5 PREDICTED: Bos taurus component of oligomeric golgi complex 5 (COG5), mRNA. 0.0 4538 100.00 0.935988090807592 NM_006348.3 COG5 Homo sapiens component of oligomeric golgi complex 5 (COG5), 0.0 3669 91.38 0.966133234090063 TCONS_00183920_5 sp|Q8C0L8|COG5_MOUSE COG5_MOUSE Conserved oligomeric Golgi complex subunit 5; 0.0 1547 89.38 0.998793727382388 2 coding ATGCGAATCAAGGCATGTGGCAGATACACATCCGGGCCCCACGCCGCTCAAAGGCAGGTTCGGTCCAGCACAATTAAGCGGAACCTCCTAGTCGGCTCGGAGCCTCGGACTGGGCAGAGCGGGCGGCGCCCAAATTCTGCGTCATCATCTGGGCGGGGCGCGCCGCTGCTGACGGCATCACTCCCGTACCAGCCAACATGGAAGGTGGTGACGGCGGCGTCTCTATGGCTGGCCGTGGGGCTCCGGGTTCCGGAGCTGCTGCAGCCACTGTCCGGGAGCTCCTGCAGGACGAGTGTTATAGTGATTTTTTAAATGAAGACTTCGATGTAAAGACTTATACTTCTCAATCTATTCATCAAGCTGTAATTGCTGAACAACTAGCAAAACTTGCCCAAGGAATCAGTCAGTTGGATAAAGAACTACACTTACAGGTCGTTGCAAGACATGAAGATTTATTGGCACAAGCAACTGGAATTGAGTCTTTGGAAGGTGTCCTTCAGATGATGCAGACAAGAATTGGGGCTTTACAGGGAGCCGTTGATAGGATGAAAGCAAAAATTATTGAGCCGTACAATAAAATAGTAGCCCGTACTGCTCAACTAGCAAGACTTCAGGTTGCCTGTGATTTGCTTCGGAGAATCATTCGCATCTTATATCTCAGTAAGAGACTCCAAGGACAACTGCAGGGGGGAAGTAGAGAGATAACAAAAGCTGCTCAGAGTCTCAATGAACTTGATTATCTTTCTCAAGGAATAGACCTTTCTGGAATAGAAGTGATAGAAAATGATCTACTTTTTGTTGCAAGAGCTCGACTTGAAGTGGAAAATCAAGCTAAGCGCCTACTGGAGCAGGGTGTGGAGACTCAGAATCCAACCCAGGTCGGAACTGCTCTTCAGGTTTTCCATAATCTTGGAACTTTGAAGGACACTATTACCAATGTTGTGGATGGATATTGTGCTGCAATAGAAGAAAATATCAACAGTGCATTAGATATCAAAGTTTTGACTCAGCCTTCCCAGTCAGCTGTGAGAGGGGGACCTGGACGATCTACCATGCCAACTCCAGGGAACACTGCAGCTTTTCGTGCTTCCCTCTGGACCAACATGGAGAAACTTGTGGATCATATTTTTACTGTTTGTGGTCAGGTGCAACATCTACAAAAAATATTAACCAAGAAGAGGGATCCTGTCTCTCACATTTGTTTCATTGAAGAAATAGTTAAGGATGGACAGGCTGAAATTTTATATACATTTTGGAATTCAGTTACTCAAGCACTTTCTTCTCAATTTCAGACAGCAACAAATTCTTCTATGTTTTTGAAACAGGCATTTGAAGGAGAATACCCAAAATTATTGCGGCTTTATAATGACTTATGGAAGCGTCTTCAACAATACAGCCAAAATATTCAAGGAAATTTTAATGCAAGTGGAACTGCAGACCTCTATGCTGACTTACAACACACGGAAGATGATACACAAGATGTATTCATACCGAAAAAGCCAGATTATGATCCAGAAAAGGCTTTGAAAGACTCACTACAACCCTATGAGGCTGCATATTTATCAAAATCATTATCTCGACTCTTTGATCCTATCAACTTGGTTTTTCCCCCTGGTGGTCGTAATCCTCCTTCTGCTGATGAACTTGAAGGTATCATTAAAACTATAGCGAGTGAACTAAACGTAGCTGCTGTTGATTCAAACCTCACATTAGCTGTGTCAAAAAATGTGGCAAAGACCATCCAGTTGTATGGGGTAAAATCAGAGCAGCTGCTCTCCACACAAGGGGATGCAAGTCAGGTGATTGGACCTCTTACCGAAGGACAGAGAAGAAATGTGGCAGTAGTAAATTCACTATATAAGTTGCACCAATCAGTAACAAAGGTGGTTTCCAGTCAGAGCTCATTCCCACCAGCAGCTGAGCAAACTATAATTTCAGCCCTAAAGGCGATCTATGTTCTTATGGGAAATGCTGTGCAACCCTTGCTGACTTCTGTGGGTGACGCCATTGAGGCTATCATCATCACTATGCATCAAGAAGATTTTTCTGGATCATTACCCAATTCAGGAAAGCCTGATGTTCCCTGTTCTCTCTACATGAAGGAGCTTCAAGGTTTCATTGTCAGAGTTATGAGTGACTACTTTAAACACTTTGAATGCTCGGATTTTGTCTTTGACAACACTGAAGCTATTGCCCAAAGAGCCATTGAACTTTTTATCCGCAACGCCAGTCTCATTAGACCTCTTGGTGAAGGTGGGAAAATGCGACTTGCTGCTGATTTTGCACAGATGGAGTTGGCTGTGGGTCCATTCTGCAGAAGAGTATCTGATTTGGGAAAGTCCTATCGAATGCTGAGGTCATTCAGACCACTGCTCTTCCAGACAAGTGAACACGTGGCCAGCAGCCCTGCACTGGGGGACATAATTCCATTCAGCATCATTATTCAGTTTTTGTTCACAAGAGCACCCCCTGAGCTGAAATCCCCCTTCCAGAGGGCAGAGTGGTCCCATGCACGCTTCTCCCAGTGGCTGGATGATCACCCTTCTGAAAAGGACAGGCTCCTCCTCATCAGGGGTGCTCTGGAAGCTTATGTTCAATCAGTAAGAAGCAGAGAAGGCAAAGAATTTGCACCGGTTTATCCCATAATGGTTCAGCTGCTTCAAAAAGCTATGTCTGCTCTTCAGTAA EMBV3_05363 TGGGACCGCCCAAATTGGAGAGGGAATAGAAAACTCCTGGGGTCATCTTGAAGACTCTGA Gene GeneID:508005|EXOSC9:NM_001035053:46_cdna Constitutive 0 NULL GeneID:508005 6 GENE EXOSC9 MGC128968 exosome component 9 EMBV3_14943 GGGGGAGGCGGGGAGCAAGATTTCATGTCGGATCTCATGAAAGCTTTGCAGAAGAAGAGA Gene GeneID:533670|APBB1IP:NM_001034593:115_cdna Constitutive 0 NULL GeneID:533670 13 GENE APBB1IP MGC128058 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein EMBV3_10007 CCTGCTGTCCAAGTATAACATGTTAATAATGTTAATTAGCTTGTATGAAATTTCCCCGTG Gene GeneID:507210|ALG1:XM_002697956:662_cdna Constitutive 1 NULL GeneID:507210 25 GENE ALG1 NULL asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae) EMBV3_31061 TTGAAGAACAGCTTGACGAGACGGAAGCCAGATGGAGAAAGGAGCGAATTGAACGAGAGC Gene GeneID:508363|CLSPN:XM_002686477:539_cdna Constitutive 1 NULL GeneID:508363 3 GENE CLSPN NULL claspin homolog (Xenopus laevis) EMBV3_35975 GGAGAAAGCATGTCTGGGGGGTCCTGAGCAGAGCTGATTGACACCGACAGTTCTCTTTTT Gene BVT0102_155637 + 1 EMBV3_32003 GK000007.2:41975665-41989219 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16862 TGCTGACTGGTCACTTGAAGCTTTGCTCTACAAGTGGGACATGAAATGTGTCCACATTCC Gene GeneID:100139217|LOC100139217:XM_002696162:110_cdna Constitutive 2 NULL GeneID:100139217 19 GENE LOC100139217 NULL similar to hCG1818127 EMBV3_39149 TGCCATAACAGCACTGCCACCAGAATAACAACTTTTTTTTGCAACAGGTTTTTTTCATCT Gene GeneID:534524|DMXL1:XM_002688999:23_cdna Constitutive 2 NULL GeneID:534524 7 GENE DMXL1 NULL Dmx-like 1 EMBV3_37273 GCATGCCTGTTTTGCTGGAGGAGTTTGTTTCCTGTCTGCAGGGACCTCTGGTTTAATACC Gene GeneID:100140056|CLDN20:XM_002690357:2_cdna Constitutive 0 NULL GeneID:100140056 9 GENE CLDN20 NULL claudin 20 EMBV3_18125 CCCCTTGGCTGGAAGTCCCTCAAGGACCAAACTCACCTGGCTGCTCAGCATTGACCTCAA Gene GeneID:281507|STAR:NM_174189:17_cdna UTR3_Alt 2 NULL GeneID:281507 27 GENE STAR MGC134013 steroidogenic acute regulatory protein EMBV3_06760 CAAAGCATACTCTGTTGGCAAAGCCATATGTGAACGTCTCAAGGATTCTCTTCCTAGGCA Gene GeneID:522459|GUF1:NM_001102067:20_cdna Constitutive 0 NULL GeneID:522459 6 GENE GUF1 MGC166108 GUF1 GTPase homolog (S. cerevisiae) EMBV3_10642 GGTGCCCATAGATGGCGTGGGTTTATCTCTGGGCTTTCTATCTTCTTCCATTGATCCATA Gene BVT0102_078042 - 0 NULL GK000009.2:40706732-40873044 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31183 CCCAGGGTTTACTTAATCTGGTGATTTGCCTTCAGTCTCCTAAACGTAATTTTTCCACTG Gene GeneID:511226|KIAA1826:NM_001046078:11_cdna Constitutive 0 NULL GeneID:511226 15 GENE KIAA1826 MGC128535 hypothetical protein LOC511226 EMBV3_42829 CTCAGGTTTAGGGGTTTAACTGGTGGCTCACTGATAAAGAACCTGCCTGCCAATGCAGGA Gene GeneID:509810|LOC509810:NM_001077894:28_cdna Constitutive 1 NULL GeneID:509810 18 GENE LOC509810 MGC140413 zinc finger protein LOC509810 EMBV3_19334 AGTTAGGGTGTCGCTTCCTGAAGATAAAAAGACTGCACAACCCCATACGCACGAAAGGGC Gene GeneID:532848|LOC532848:XR_084666:75_cdna Constitutive 0 NULL GeneID:532848 29 PSEUDO LOC532848 NULL similar to hCG2036584 EMBV3_28325 GTGCCCTTGATGAGATGGTGGCCAGAAGCAGACACACTCCCCAGAACACAGCCTCTCTGT Gene BVV0102_241347 + 0 NULL GK000016.2:51123864-51277883 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11257 ACATCTGTTCAGGTGGACCAGTTTTTTCCTCCATGAAACAAGAAAATGGATGAGTTCTGG Gene GeneID:614794|C11H2ORF64:XM_002691146:169_cdna Constitutive 0 NULL GeneID:614794 11 GENE C11H2ORF64 MGC126907 chromosome 2 open reading frame 64 ortholog EMBV3_22667 GCCCACACGTCCCGCTCGTCGCCGGCTACGCTGCAGTGGCTCCTGGATAATTACGAGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08435 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20874 GGACGTTGTATTATTTTGGTTGTTATTTCTGAGCCTTGCTAGTGATTGGAGCTCTGAGCC Gene GeneID:535750|ALS2:XM_002685510:40_cdna Constitutive 0 NULL GeneID:535750 2 GENE ALS2 NULL amyotrophic lateral sclerosis 2 (juvenile) EMBV3_32636 AGGCAACAAATGAGGTCAGAAACACTCTGGAGGGAACCAACAGTAGAATAACAGAGGCAG Gene BVT0102_202617 + 0 NULL GK000030.2:38383559-38476416 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089138 TCONS_00208422 2 XLOC_053924 XLOC_126935 NonCoding TCONS_00089138 XLOC_053924 NonCoding NonCoding - 18:24154472-24155807 - TSS66484 1335 1 TCONS_00089138_2 74 0.999250936329588 1 0 0 0.000121057846780817 1.38636744930695e-05 6.22033154707054e-06 0.000116072563169779 2.67944023659718e-06 9.10066585304229e-06 0 2.69242569888278e-05 6.47223913542318e-06 0.000299998707854142 9.38507682247413e-06 0 0 0.000505850730856928 0.000263786117842725 0 3.7589349411574e-05 2.95431049333831e-05 1.18510580848518e-05 2.2739535151454e-06 7.93216715921733e-06 2.57698737580754e-06 1.38135432306831e-05 6.48732851681573e-07 9.61887838806967e-05 4.38887776123393e-06 3.74134800356332e-05 3.63641027398061e-06 9.00711356004144e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 5e-63 246 94.34 0.118352059925094 0 noncoding CTTTAAGAACTCAATCTTCAGTACCCATTTTTACTTGGGAGCGAGATTACTGGCTTGACTGCTCTCTCCCCCTTTGGATTCTCCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCTTTCTCTTCTCTACCCAACTCTGTGAATCTCTTTGTGTGTTCCGGACTGTAGAGAACACTGGGGGAACTAATTACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCCCCCTTTATCCTCCTGGCCACCTCTGCTTCCTTCCTCCCTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGACTGTGGAGCACACATAAGGAAGTGATTGCTGGCTAGCTTGCTGTCTCCTCTTTTGATTCCCCCTCTTCTCCTTCTGGTCACCTCTATCTCCCTCCTCCCTCTTCTCTTCTTCATGTAACTCTGTGAAGCTCTCTGGTTGTCCATCACTGTGGAGAAACTTTTCATCTCTAACCTACATGTTTTATCATCAGTGCTGTATAGATGGAGAAGTCATGAAGCTACTGTAAGAATAAGACGTAAAACCAGAGGCAGGAGGCTTAAGTCCAAAGCCTGAGAACACCACAGAACTCCTGACTCCAGGGAACATTAATCGATAGGAGCTCATCAAATGCCTCCATACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCACACAAATTCTCCAGCAACACAGGAACATAGCCCTGAGCTTCAATATACAGGCTGCCCAAAGTCACTCCAAACCCACTGACATCTCATAACTCATTACTGGACACTTCATTGCACTCCGGAGAGAAGAAATCCAGCTCCACTCACCAGAACACCCACACAAGCTTCCCTGACCAGGAAACCTTGACAAGCCACCCATCCAACCCTACCCACAGTGAGGAAACTCCACAATAAAGAGAACTCCACAAACTGCCAGAATACGGAAAGGCCACCCCAAACACAGCAATATAAACAAGATGAAGAGGCAGAGAGATACCCAGCAGGTAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGAAATCTGCCTGATAAAGAATTCTGAATAATGACAGTGAAAATGATCCAAAATCTTGAAAACAAAATGGAGTTACAGATAAATAGCATGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAGATCAAAAACACTCTGGAGGGAACCAACAGTAGAATAACAGAGGCAGAAGATAGGATAAGTGAGGTCGAAG TCONS_00085766 TCONS_00085767 . 3' 7418 TCONS_00085766 TCONS_00085767 . 3' 8752 EMBV3_14275 GCCACCACGTGCATCCACAGGTTCAGTAACGGGGGCAAGGAAAAAAGAGTTGCCCATTAT Gene GeneID:781020|NDUFA1:XM_002699957:21_cdna Constitutive 0 NULL GeneID:781020 X GENE NDUFA1 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa EMBV3_19306 CAGATATACAGAGAAAGACTAGCCACCGTGAGCGGCCTAACCACACAAGGGTAACACATG Gene BVV0102_228503 - 1 EMBV3_34749 GK000008.2:61929098-61942615 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11019 TGTATATGTTTACAGCGTAATTGATTTCTAATGCTACCCATTATGCTCTTACAGTCACAG Gene GeneID:539350|TICAM2:NM_001046456:33_cdna Constitutive 0 NULL GeneID:539350 10 GENE TICAM2 NULL toll-like receptor adaptor molecule 2 EMBV3_04639 TGTTATGGTACCTCTGATTGGGTTCATACATTTGGGGTGGCACAGGATCAAAAGCAGCCC Gene BVT0102_276043 + 0 NULL GK000001.2:53885750-53995475 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044307 TCONS_00044311 TCONS_00044309 TCONS_00044310 TCONS_00044308 1 XLOC_026175 Coding TCONS_00044311 XLOC_026175 Coding Coding MKKS 13:3574574-3598098 j TSS32601 2712 1 TCONS_00044311_6 570 6 0.884963652595332 9.12001799828692e-05 0.000401496075024519 0.000375911521246216 5.69338966028493e-17 0.0002357490543237 1.4009935140825e-17 4.50919839901507e-18 1.25494288871546e-17 5.21856364615961e-05 9.65764177397855e-05 0.000234730630376292 2.38338152749212e-05 8.46236976330452e-06 5.81310140941784e-17 2.8986961004189e-18 0.00221771604377504 0.00221580182400616 0.0015448195428678 0.000142460419660476 0.000371077084328933 6.29223667175446e-05 0.000747285211338498 0.00212744166608253 0.00277229123662716 0.000150387779213863 3.28756546836178e-17 0.000298081553896973 0.000301294811232383 0.000144967469148618 6.22009594505419e-05 NM_001206171.2 MKKS Bos taurus McKusick-Kaufman syndrome (MKKS), mRNA. 0.0 4773 100.00 0.975294985250737 NM_170784.2 MKKS Homo sapiens McKusick-Kaufman syndrome (MKKS), transcript variant 0.0 2351 80.37 0.950958702064897 TCONS_00044311_6 sp|Q9NPJ1|MKKS_HUMAN MKKS_HUMAN McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; 0.0 946 79.65 0.998245614035088 1 coding 0 0 1 1 -0.19981364157142 0.122714964717771 0.0286945819193106 0.607848319611645 GGCCGAAAGCGTCACCAACGCCCGGAGGAGCCGCGGGCCTGCGCGAGCACGGGGCTGCGCATGCTCGGTTCCCAGAGCGGGCCTAACTCCGGGAGCTGCGGCGGCGCGAGGTGCGGCCTTGGAGTCTGCGGGCGGCGGCCGGCAGGCAGGTACACTGATGCTGAAGTACTATGGGCTTTCAGAAGTTCTGGAAAGACTACAAAGTTCTGGTTGTTATGGTACCTCTGATTGGGTTCATACATTTGGGGTGGCACAGGATCAAAAGCAGCCCTGTTTTCCAAATTCCTAGTAAGGACAACCAGACAGTCTGGCACTTACAAGTCCTAAGAAGAACCACCTCCCAGGGAAGTAGCAGGCTTGCAAGTTTCAGAAAGAAGCAGCTCTGAGTCAGAGCTTGAGCTAGAAAGAAGAGATGAAAAATAGCAGTTGGATCAGAAAGAACTGGCTTCTTGTAGCTGTGGTTTCCTTCATAGGTGTCCATCTTGGAACGTATTTTATACAGAGGGCTGCAAAACAGTCTGTAAAGTCTCAGCCTGAAGGCAAACAAAAGAATTTGAATAATGAAGTAAAATAAATATTTGGAATTACTAAAATGTCATTATATCGATCCTTACGTGCCGATTCGCTTCATAAGCATGGAGCTCAGTATTTAATTTTAGAGCCACAATGCTGTAAATCCTAACTCTTGATTCCTAAAAGATAATCTTGTTAAATGTTAAAACCCACGACAATACAATGAATAGAAAACTCTGGTTAACAAAATAAAAACTTTCTTCACAAATTACCTTGCAGTAACATGTCTCGTTTAGAAGCTAAAAAGCCCTCTATCTGCAGAAGTGACCCCCTGACGGGCGAGCGTGCCAGGGCCAGCCTGGCGGCCTTGAAGGGCCTCGTCATGTCGTGCTACGGCCCAGCGGGCAGGCTGAAGCAGCTGCACAACGGCCGGGGCGGCTCCGTGGTCACCACGTCCCAGTCGGCTGCCCTCCTCGCCGGCCTGCCCGTCAGCCACCCCGTGTTAAAGGTCCTGACGGCCGCCGTGCGGAATCACGTGGCCTGCTTCAGCGATGGCGGCTTATTCACAGCCATTCTTTGCTGCAACCTTGTCGAAAATGTTCAGAGACTAGGCTTGGCACCCACCACGGTTATTAAGTTAAATAAGCATCTTTTGAGCCTCTGCACCAGTTACTTGAAATCTGAGGGCTGTGCTTGCCGAATCCCAGTCGACTTTAGTAGCACCCAGATCCTCCTGAGTTTGGTACGCAGCATATTAACAAGTAAACCTGCCTGCATGCTCATCGCAAAGGAAGTTGACCATATCAGTACTCTGATTCTGAGAGCCTTTCTGCTTACAATTCCAGAGAACGCCCAAGAGCACATCATTTTAGGAAAGAGTATAATTGTTCCTTTAAAAGGGCAAAGGGTTATAGATTCTGCTGTGTTACCTGGAATACTTATTGAAGTATCAGAAGTTCAATTGATGAAGATACTACCTATCAAAAAATCAGATTCCTTCAAGGTGGCCCTCTTTTGTGTGTCTTTATCCGGAGACCTTTCTGATACTGGAGAAGGAACACTGTTGGTCAGTTACGGAGTTTCTCTTGAAAATGCAGCTCTGGACCAGTTGTTTAACCTAGGAAAACAACTAGTTAGTGACCATGTAGATCTTGTCTTGTGTCAAAAAGTTATACACCCATCTTTGAAACAGTTTCTCAGAACTCATCATGTTATTGCTGTAGACAGAATTGGCGTGTCTCTGATGGAACCCCTGAGTAAAGTGACAGGAACATGGCCTATTGGTTCCTTGGGCTCAATCTCCCCCAGTAGTTATGGAAGTGTAAAAGATTTGTGCATTGCAAAGTTTGGCTGCAAACATTTTTTTCATCTTATTCCTAACAAAACAACTATCTGTAGCCTGCTTCTCTGCAACAGAAATGACACAGCCTGGGATGAGCTGAAGCTCACGTGTCAAACAGCACTGCATGCTTTGCAGTTAACAATCAAGGACCCGTATGCTTTGTTGGGAGGTGGCTGTACTGAAACTCATCTGGTGGCATATATCAGACACAAGACCCGTAATGAGCCAGAAAGTGTTCTTCGAGATGAGAGATGCTCTCAGACAGAACTCCAGCTGATCACTGAAGCATTCTGCAGCGCACTTGAATCTCTCGCTGGCTCTCTAGAGCACGACGGAGGTGAAATTCTTACCGATAGCAAATACGGACACTTCTGGTCGGTTCAGGCCAATTTGCCTTCTGCTGTGAACTGGCCAGATTTGCCTTCCAGATGTGGCTGTGGACTCTACAGCAGCCAGGAAGAACTCAGCTGGTCCTTCCTAAGAAGTGCTCGTCATCCCTTCCCACCGCAAACCTGCCTTTCCCGTGAAGCCACAGGCTCGGCCGACACCCTGACCTTGGACTGCTTTACCGCGAAGCTTAGTGGCCTGCAGGTGGCTGTGGAGACTGCCAGTTTGATTTTGGATCTTTCATGTGTCATTGAAGATACAAACTGATGTAATGTTATCTTACAAAAAGAAAAACTAGTGACGTGTCAATAAAGAAAAGCATTGAGTTTATATGTTCTCTCTGAAAGGCCTGTTCTCCATATTGAGATTGATGATTCATAAAATCATAGATTTACTTATTTAAGGAAAAAAGAATTGATTCTTGAATAGAAATACTATAGAATAATAAAAATATGAAGCATTGTTGAAAA EMBV3_01058 TGTTCTTCGGCTGGAAGCTGGGCGCGCTTGCCTTCGCCGACATTCTTGTATTGATCGTGT Gene GeneID:100300473|LOC100300473:XM_002683884:2_cdna Constitutive 0 NULL GeneID:100300473 Un GENE LOC100300473 NULL similar to CG2789 EMBV3_16352 CACTGCAGTTTGCTGACAGACAGGCTGAGGCTTATTGTGCAGGCGCTGCCTTAAATAACA Gene BVT0102_037436 + 0 NULL GK000018.2:64270787-64291059 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12717 GCCTGCATCTTCCTTGTCCCAGAACGAGGCGATTGTCGTTTCTGCGATGAGCTCACAGAA Gene GeneID:614778|C8H9ORF85:NM_001101235:2_cdna Constitutive 0 NULL GeneID:614778 8 GENE C8H9ORF85 NULL chromosome 9 open reading frame 85 ortholog EMBV3_15135 TACTTCAAGCAGTGGATTAACCTGAAAAAGATGACTGCAAGAACATTGCCAACATCATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25469 AGTCTCAAGGAAGCAGAGAATGGGATGGCTGTGGCCTTGGGCAGGGAACTCTTGTCGAAA Gene BVV0102_262252 + 1 EMBV3_12257 GK000005.2:57606868-57616540 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09196 GACCTCTCCTCGGAAATGTTCAACGAATTTCATGAAGTCCTTATGAGCTTGATTCTTGGG Variant GeneID:280901|PRL:NM_173953:12_cdna 265^372 1 EMBV3_21730 GeneID:280901 23 GENE PRL NULL prolactin EMBV3_41220 CGCCTGATCAAACTGCACCTAGAGGTCTCATCCACCTACGTCTCCCTGAGCGTTTACTTT Gene GeneID:531957|LOC531957:XM_002700226:197_cdna Constitutive 0 NULL GeneID:531957 X GENE LOC531957 NULL similar to ferritin, light polypeptide EMBV3_28426 TACCGAGCCTCAAGAGATTGCCTGTTCCCCAGATCCTCTCATATTTTTGTACACCCAGCC Gene GeneID:614360|SEP15:NM_001034759:92_cdna Constitutive 1 NULL GeneID:614360 3 GENE SEP15 NULL 15 kDa selenoprotein EMBV3_35275 CCTCAAGTCCATCAAGTACCTCATCTGCACGCGGTACAAGTGGCTCATCATCAAGATCGT Gene GeneID:617299|OTOF:NM_001144107:240_cdna Constitutive 0 NULL GeneID:617299 11 GENE OTOF NULL otoferlin EMBV3_31778 AGCCTTTATTCGGCGCTCACATCTTACTAAACATCAGCAAATTCATACTGGAGAGAGGCC Gene GeneID:100336431|LOC100336431:XM_002695348:13_cdna Constitutive 0 NULL GeneID:100336431 18 GENE LOC100336431 NULL zinc finger protein 570-like EMBV3_20345 GACATAGCACCAGGTGACATGCTTGACAAGGTATCGAGCAGGGGCAGGTCCTGTCTTCAG Variant GeneID:514738|OSGEPL1:XM_002685221:107_cdna 749^953 1 EMBV3_15569 GeneID:514738 2 GENE OSGEPL1 NULL O-sialoglycoprotein endopeptidase-like 1 EMBV3_40920 TCATGGCAAGTTGAGCTGAACAGTGGACACACAAACGGCCCCCTCCAAGACTTATTCTTC Gene GeneID:533333|ELOVL6:NM_001102155:62_cdna UTR3_Alt 2 NULL GeneID:533333 6 GENE ELOVL6 MGC139109 ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) EMBV3_19673 CCTTATCCATGTCCACAAAAATCCAGAGTAGTACCTAGGCATCAAGGAGCACACACACGG Gene GeneID:511839|ATP6V0D2:NM_001046101:36_cdna Constitutive 0 NULL GeneID:511839 14 GENE ATP6V0D2 MGC128740 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2 EMBV3_31402 CTCCATCCAGAACAACCCCGGTATTGCAGCCGACTTCCTGCCCACATTCATGTACTGTCT Gene GeneID:790146|INTS1:XM_002698235:851_cdna Constitutive 0 NULL GeneID:790146 25 GENE INTS1 NULL similar to DKFZP586J0619 protein EMBV3_38347 AGAGCAGGGAAGGAGGTGCTCCAGGTTTGGGGAGGATAAGGGTAAGAGGTGGTGACGCAT Gene GeneID:532237|PSD4:XR_083797:341_cdna Constitutive 0 NULL GeneID:532237 11 PSEUDO PSD4 NULL similar to PH and SEC7 domain-containing protein 4 (Pleckstrin homology and SEC7 domain-containing protein 4) (Exchange factor for ADP-ribosylation factor guanine nucleotide factor 6B) (Telomeric of interleukin-1 cluster protein) EMBV3_36264 TTTGTACTTGACTGTGGATCCTTACATGAGAGTTGTGGAAAGTAAAAATTCAGCCTTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14067 CCCAGTGACTTCCAGCTCACGGACAAGGAGGCTGCCTTGGGGACACGCAGTTCAGTTTTC Variant GeneID:100139352|LOC100139352:XM_002688003:144_cdna 313^355 1 EMBV3_39727 GeneID:100139352 5 GENE LOC100139352 NULL similar to Protein FAM116B EMBV3_23167 TGGGATTGCCACTGGGCTTCGTCGAGCCCTGTTTGAATTCTCGGGAAATACTCGTTTACA Variant GeneID:767955|GML:NM_001077025:143_cdna 171^278 1 EMBV3_18474 GeneID:767955 14 GENE GML MGC134423 glycosylphosphatidylinositol anchored molecule like protein EMBV3_26806 GAGTACAGCTTACCCTCGGCACTCTTTATTGGCCCTGGGAAATTTTGCTTCAGTACTTTA Gene BVV0102_086643 + 0 NULL GK000023.2:52445490-52494698 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118488 TCONS_00121789 TCONS_00118496 TCONS_00121790 TCONS_00054131 TCONS_00121786 TCONS_00122158 TCONS_00054163 TCONS_00121788 TCONS_00122172 TCONS_00122897 TCONS_00138409 TCONS_00120354 TCONS_00121787 TCONS_00121784 TCONS_00121791 TCONS_00122202 TCONS_00121785 TCONS_00054179 11 XLOC_072644 XLOC_073484 XLOC_031940 XLOC_073713 XLOC_031972 XLOC_073727 XLOC_074451 XLOC_084617 XLOC_073146 XLOC_073757 XLOC_031988 Coding TCONS_00121784 XLOC_073484 NonCoding Coding LOC100848264 21:60875319-60880390 j TSS90637 2913 2 TCONS_00121784_8 92 0.0569859251630621 3 0.42603550295858 0.000401748248944648 2.6423463211345e-64 0.000124259963908812 0.000516044040945929 8.62304975407109e-05 0.000236909156697626 0.000172285811308061 9.25757967259125e-05 0.000145249897203945 7.48687024019666e-06 1.47900310385452e-05 2.51293638827252e-59 3.07672422908691e-05 1.42456646662037e-30 1.17420567354868e-06 0.0014103971569146 0.000580208945165322 0.00159084248854046 0.000356934319850796 0.000411614879473073 2.66286836490796e-35 0.00155907592283559 0.000460762826967629 0.00152568250823812 0.000214251326975885 0.000101274198775313 1.74421798415192e-17 9.405936184721e-08 3.16716645022558e-05 0.000935482632580102 XM_003587596.2 LOC100848264 PREDICTED: Bos taurus liprin-alpha-2-like (LOC100848264), 0.0 3804 100.00 0.723652591829729 NM_003626.3 liprin Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 7e-129 466 82.64 0.163405423961552 0 noncoding 0 0 0 0 -0.0570609256710494 0.626432706588582 -0.103665863845621 0.109834017371026 CACACTCGACAGGCTCTCAGGACAGCCCTGGGAACAACCCCAGCAGCAGCACCAGCAGGCAGGACTCGCTGCACAAAGCCTGGAAGAAGAATGGCATCAAGTCCTCCATCAGCCACTTGTTTCACAAGAAGGAAAAGGGCTGGCCTGAACACCCTGGCAAGGAGGCATTAGGACCAGGCAGGATCTTTACCCCTAGCGCCACCTGGAAAGCCCCAGTGAACGCTGACAACTAGAAATGCAGAAAATAAGGGCTGCTCCTAAGTTAAACTGGAAGAGCAGCAAGCACAGGTTGTAAAGAGGAAAACACACGATGAGCCACAACAGCACCAACAGAAACAAGGGATGCGTTCACCCACATAAAGAAAATATCTGTGCCATTCGGAAGAGGAGCCCGTCAGCCCTTGGAGGGACAGTTGGAACCAGAATGAAAACCGAGGCCATGGTCAGCAGTGCCCACCACATGGCCTGGGTGGCGTGGTGTCACTCACCAGGCTTCCTGTATCCCCAGAGCTGCTGGCAGTAACATCTCTGAGTGCTAGGCTGGGCAGCGTCCCCGTGTGAGCTAAGGCATCACTACTCTCCTTCCAGTGCTGCTGTGGGGCCCTCTGTGGGGGGCCACCCTCATCCCCTGCCCTGCCACCCTCTGGGGCCCAGCTGCCCCCAGGGATCCTTTCAGCCCTTGAGCTTGGGTGTTCCCAGCCCTCTGCCACGCCGGTCTGGGACATGACTCAGGACTTGGGCTTGAGATATCAAGGAGACCGTGAATCTGGAAGGATACCACCCTGGGGCCCATGAGAGAGCAGGAGAGCAAAGCTCCCACGGGGAGGAAGCAGAGCTGGGGAACGTGCCCACAGCCTCCACTGCCTCCTGCACAAGTGCCTCTTCTTTGCCTCTCCTTGACCTGAAACAAAGCCCAGCTGCTGCTGCTCCACAGGTGATTCCTAAAGATGCATCTCCTGCCAGAGCTATTGTCCTGCTGCTCTGGGGCTGCCTGAGTGTGCTCAGGAGCGTCAGACAAGTAGGGTTGCCACACCTCATACTGGAGGTGGGGGGCCTGATACTGGGGAAGGGTTGGGGGGTGGGGGAGGGCCTTATGCTGGACTAGAGCCTGATACTGGACTAGGGTCTGATGCTGGGGGAATGTCTGATGCTGGACTAGGGCCTGATGCTTGGGAACATCTGATGCTGGACTTCGTTCTGATGCTGGGGGATGGCCTGATGCTGTGGGGCACATCTGATTCTGGACTAGGGCCTGATGCTGTGGGAGGGCTTGATGCTGGGGGGAAGGTCTGATGATGGTGGGCAGCCTGCTCCCAGATGTACATGAAGTTGAGGATAAATCTCTATGGGAAATCTTTTTTTCATACTTTCCTGACCAGCTTGCTATGTTCTTTTTAACTTAAGGATCATTTTGTGCAATATCGGTTGATTTCTGCCATACATCAACATGAATTAGCCATAGGTGTACGTATGTCCTGTCCCTCTTGAATCTCCCTCCCACTTCCCCTTGCTACATTCTTGTTTCTATGGATATATGAATAATAAAGACCGTTGACTAAAATAACATGAAAAGCTCCCACACACAAGTGTGCACGTGCACACTCCCTTGTGCATTATTCGGGTCCACGAGAGGGCCCTGTCCCCGCAGATGCTGAAGTGATGGAGCCTCTTGTCTCCGGAGCCAAGGGCATGAACACACTGTCGGTCGTCCTCTAGGGACACCTATGCTTCCGCCTTCTGGCCTTTCCATTGCATCCGTCCGTTTCTCTTAACAGAATGTCCCTGTGATGACACGGGCTCCCGTTACCAGCTCTGGTCTGTTCTCAGTGAGAGTACAGCTTACCCTCAGCACTCTTTATTGGCCCTGGGAAATTTTGCTTCAGTACTTTATTGAAAGAAAGCAATAAATAATACTGTGATAAAAATAGTTCAAAAGTAGACTGTACATACTTTGTCACATATTTGGGAAGTTCACAAAAGATTAATAGGAAAATAGAATGATAACAATGAATTGTACAAGTAAATTAAAGGCGGAACCCACATGTAAAGAGACATGCTGTCTCTGTCTACCGAGATACCAGCTGCATAATAAATATCGCACCATGACCTGAACGCATCTCTTGCTGGCTTTTAATGTGCCGCTGAAAAAGTAAAAGTTACATTTGCTACTTATACAATCCAGTATGGCTATGTCATCACAATCTAAAAATGTATGCTTAGGTCCATTCTTTAAACATGTTTACAAACAGATGTAAAAAGATGATTTACATAAAAATAAGGCCTTTGTCAGAGCTGCACTATGCTGTCTGGAAAGTGGCACCTTCACTGTCCAGCTCGATGGCTCCACAGTGGGTGCAGGGCATCGCAATTGGTACCCGAAGAGTCTCACCAGAGAAGAGGGATCCAGGTCCACAGAGGGATCCAGGTCCACAGAGACTAGGTTATGGGAGAGATTTTCATAGTCTTCTTCTAGTCATCCTTTCAGCCCAAATTTCATTAGAAGCTCACATTTAACACTCAGTACTTTTAAATCACCTCACGCTGCGGACAAAAAGCATTTCTTGCTAGAAAAAGTACAGTTTAGGCCAGTCAAAATCCAATAACAATTGGTTGAAATTAAGTTTGCTTATTTCAGAGTGATTGTTGGAGAGCTTGGTTACATTCTGGAAGGATAATGTACACCATGTCATAATGATTTTACAATTGTAGGAAAACCCCTTCTCTCGTGGTTTAACATTTAAAAATTAAACAATAATTACAATAAATGCACTATTTACAAAAGCCCTATATTTGTTCATAGGATTTATACAGACAAGTACTACAGTACATTCATTTGAAAGACTAAAATCAGGTATCAGAACATGAATTGATCTGAAAGGTTATTTATAGCCTGAATATACAAGAAAAAGTAAG EMBV3_39426 AAGGTGCTGCCACTATTCTGTCTGGGGTGGGAAGGAGGGGTCACTGGGTAAGCTGTCAAA Gene GeneID:508320|STK19:NM_001097997:72_cdna UTR3_Alt 3 NULL GeneID:508320 23 GENE STK19 NULL serine/threonine kinase 19 EMBV3_33291 TAGAAGCCAGCTTTCACATAAAGAACCAAACCGCTGCTTCACCTGCTGACCTCCATCCTC Gene BVV0102_078248 + 0 NULL GK000017.2:59916271-60051239 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16747 ATTTGCCACAGCTGGAGATTGCTATAGTGCTGCCAGATGCCCACAGGGACAGTTCAGCAT Gene GeneID:536137|ADAMTS20:XM_002687359:42_cdna Constitutive 0 NULL GeneID:536137 5 GENE ADAMTS20 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 20 EMBV3_42656 CTTTAATGCATGGATCCATAAACTCTCCCTACCTGCATCATGTGCATGTGGTGCGTCCTA Gene GeneID:282110|UCHL5:NM_174481:2_cdna Constitutive 1 NULL GeneID:282110 16 GENE UCHL5 MGC127682 UCH37 ubiquitin carboxyl-terminal hydrolase L5 EMBV3_04000 CAGCTGAAATAGAAACCCTCACCAGTGCATTCAGGGGCCTGCCTCCCTCGCCATAACCAA Gene BVT0102_023929 + 1 EMBV3_25688 GK000019.2:20441107-20442061 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092595 TCONS_00092596 TCONS_00092598 TCONS_00092597 1 XLOC_056928 Coding TCONS_00092598 XLOC_056928 NonCoding Coding SARM1 19:20438584-20441972 j TSS69637 2624 1 TCONS_00092598_4 158 0.0434451219512195 3 0.226158842633599 2.55538304748364e-73 1.58695708265095e-05 1.25603119229951e-193 0.00012092637426581 0.000302517936617686 4.25274807593239e-05 1.62112634304356e-05 3.83176439358763e-05 4.51011088608478e-05 2.72620689744055e-12 6.10612109799086e-06 0.000144443400654826 7.10558269040944e-06 5.66664353088054e-30 3.70735520915042e-113 1.7633885891314e-09 0 9.5539475165785e-06 0.000336178618111108 0 3.26989749033918e-05 1.97938237396833e-05 5.68780716424029e-31 2.1973267868714e-09 0.000213323886483087 9.81040315538292e-05 0.000144957214550154 2.00958333459128e-06 3.69877464002216e-06 0.000144878167838454 NM_001102518.1 SARM1 Bos taurus sterile alpha and TIR motif containing 1 (SARM1), mRNA. 0.0 3103 99.94 0.65625 NM_015077.3 SARM1 Homo sapiens sterile alpha and TIR motif containing 1 (SARM1), 4e-176 623 72.93 0.434832317073171 0 noncoding 0 0 0 0 0.220929391025195 0.335011498575215 0.0236323756283574 0.745715124297623 CACCCTCTCTGCACCTAGATGTGTTCACCAACCTACCTGGAGATCGTGACTGCTTTGAGCTGTGGCAAGAACATCGTGCCTGTCATTGACGGCTTCAAGTGGCCAGAGCCCCAGGCCCTGCCGGAGGACATGCAGGCTGTGCTCACCTTCAACGGCATCAAGTGGTCCCACGAGTACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCTGGCTCCGACACCAGTTTGGAGAGCGCTGCACCCCCTGGGCCCCATCTAACCAGCCCCTAGCTCCCATTTCCATCATGACTCCCATTTCCCTCATCCTCCCCACCCCAGTGGAACAGCCCCTCAAACTGGCCTCCCTGGGCTGAGGCAGCCTAGGCTCTTCTCAGGAAATAGCTAACTCCCCTGCCCTCATGGTCCACCTCAAACCCAACATCCTCAGTATCTGCAAAGAGAAGGGAAGCCAGGCATTGGGGGTGCTAAGACCTCCCCCAGGCCCTTGCCCTCTGTTCCTGTCTTGAGTGTGGAAGGGTCACTGCTCAGCTCTGAGGAGGTTCTGGAGGAGGAGGGTTTTCTGTGTGTTAAGCTTTCCTGCCCTGCCAACAGCCAGCTTGAGTAGAGTGAAGGCAGGCAAACTCCAGCAGGGGTTGGTGCCATGGCCACCCCTCTCCGTCAAGCAAGGGCTTGGGCCTGAGAGCCAGCCAGGGACGAGAGGCCAGCCATGGTCTCCATTGAGGGTGCACCTGGCCCCTGCACTCACCACTTCCTACCGCCCTGTGGCCTTGCCTCATAGCCACTCAGTGCCCGTAGCTAGCCTGGCCTGACCCCAGGTTCTCTCCCAGCCTTCCTGATGTGCAGCCTCCTTTGCCACACCTGGGGTCAGGGTGATGGCGAGCCGGCCCTCACTCAGGCTGGTCAGCAGCTGCAGCCTGTGCTCACGGGTGCAAAGGCAGCTCCTGCTTAGGCCTGAGCAGGGGAGGCTGTGTCTCAGAGTGCAGCTAGCCAACCTATTATGCCTTGGTGCTGTGTGCCAGGCCTCTGCCCAGCCTGGCTCAGCCCCCCATCCACCCACCAAAGGCTGCTCACCACCCACTGACTCAGGGAGGTGGAGCGAGGCAGCCCCATGGGGCAGCAGAAGTAGCCTGGGCAGAACCTGTAGCTCCCCAAGGTGTGAACCCATTGCCCTCTGGGAGGGGAGGGGCAAAGCCGGTGAGGAGAAGCAAGATCCTGAAGAGGGGGATGGGATGCACCTGAATCACAGGAGGATTTTGTTAAAATTCCATTCAGGACACCTGGGGTGGGGCCCGAGTTCCTGCATTCCTCATGAACTCCTGGGTAGGCTAAAGCTGGTGACCAAGGAATGACATTCAGTACCTTAGGCAGCCAGGCTCTAAGGCCTCACAGATGTTGGTCATTTCCCTGACACTTCACCCCCTGGCCTATAATCACCAGAGCAACCTTACCTGGTATCATCTCCGTCTGACAGAGAAGGACCTGAATGACGTGCCCAGTGTCCCAAGTCACTAGAGATAGCCCCAGGACGCAGACCGGGCCTCCTGGCGCCCCGTCCATGGCCAGGGGCACTGCTCCCTTGAGAATTATCCAGGAGGCTGCACCCCAGGCAGGGCTGTTGCTCTACAGAACGGCCAGCTTCCCTCTTGCCCCCCAGGACTCTAGCCATGGGGGACAGGCTTTCACAACAGACGGCTGACCCAGAGGCTATAAAGAAATAACTCAGCAGAAGTGTTCCTCGGTCCTTCTCTCCGCCAGGGGTAGAGAGCATCTCCTGCCAATAAATGCAGGCTCCAGCTAATGGGCTCGGCAGGCACCAGCCCAGCCCCTCCCCTCCCAGGGGCAGTGGGTTCACAGCTGGCTTAGGTCCCAGAGCTGCCTCCCACGGATGCAAGCCAGGCCCCCTTGGAGCTCCCCAGCCACATCTATACAAAGTCAAAGGTCTTGCTTCAGGCTTGGAACTCCTTCCTTCCACTCCCTTCCCTGCCAGATACACTAGCCAGTCCTCTGGGTGCCCTTGACCCTTTCTCCTTCATGCTTCATGAACGCCCACCAGTGTCAGGCCCTGGACAGGACAGCGGATGTTGCCCCCAAGAGCAGAGGCAGTAACAATATAATGTGACAAGTCTCCTCCAGAGAAGGCCTTGTCTTCTTGTTCCCCATCAGTCCCACTCCCTCCAGAGGCCCCTCACCGGCAGTACTCGGAGAAGTTGCCCAGCACACCCTCCACTGCCTGCCTCCTCTCTCTGGGGAATCAGAGCCCAGCCTCCAGGCCCTGCTGGAGCAGCTGAAATAAAAACCCTCACCAGTGCATTCAGGGGCCTGCCTCCCTCGCCATAACCAACCACTGCCCCGATTGCAGCCAGGGCAGGCACCTTGGCCCTCACTGTCCACCTAGGCCTGGCCTCACAGAGCCTCTTCTGAGACAGAGGGCTGAGAAACAGCCTTCCCCCCAACCCCCAGCCTGCTCTGACATTGCTTTGAAAGGGTCAGAGTTTTTTGCTTAGATGGGCTGTAACTGCTGCCCCCACTATGGGGCTGAGTCAGCTTCACCCCATCCCAGCCCTCTCCGAGACCAAGACCTTGCTCATGAC EMBV3_23236 TCAAAGTGACCTCATCACACCTAGAGGAGGTAGGTATATGCTGTAAGCACCAAGGTCTTC Gene BVV0102_301187 + 0 NULL GK000017.2:72740067-72747584 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076304 TCONS_00076311 TCONS_00076308 TCONS_00076305 TCONS_00076306 TCONS_00076310 TCONS_00076309 TCONS_00076307 1 XLOC_046777 Coding TCONS_00076310 XLOC_046777 Coding Coding SLC5A1 17:72725325-72741951 j TSS57301 3572 1 TCONS_00076310_3 454 0.0753079507278835 10 0.785744360902256 0.00583515835408158 0.00620641930933488 0.00655946508053407 0.00571607140231673 0.00466252159822039 0.00210113746308692 0.00349644616672089 0.0036975190494564 0.00480869702719971 0.000157455707104487 0.00111489787325924 0.000315085532341709 0.00094408922359575 0.00192993127016098 0.00185848653487874 7.30025935323312e-05 6.45120250555817e-05 0.000385491188953954 0.00688973070492522 0.0076208415138173 0.00140449117822334 3.40247861529809e-05 0.000244425582606893 1.15258087466453e-05 0.00460158618871835 0.00552468608841677 0.00282182770125727 0.00025780299950373 8.6653872677053e-06 0.000368786977864466 XM_005218131.1 SLC5A1 PREDICTED: Bos taurus solute carrier family 5 (sodium/glucose cotransporter), member 1 (SLC5A1), transcript variant X2, mRNA. 0.0 6055 100.00 0.93952967525196 NM_000343.3 SLC5A1 Homo sapiens solute carrier family 5 (sodium/glucose cotransporter), member 1 (SLC5A1), transcript variant 1, mRNA. 0.0 2143 81.55 0.62541993281075 TCONS_00076310_3 sp|Q8C3K6|SC5A1_MOUSE SC5A1_MOUSE Sodium/glucose cotransporter 1; 0.0 823 85.71 0.997797356828194 1 coding 0 0 0 0 0.0579883248099294 0.696937118957685 0.0220616113111751 0.664711328875012 GGGTGCTCAGTGGGAAGTAGTTGAGGGTGGGGGTGTAGGTGGGGGCCTGGCGGCTGTGATTTACACAGACACCTTGCAGACGGTGATTATGCTCCTGGGGTCTTTCATCCTGACTGGGTTTGCTTTCCACGAAGTGGGAGGGTATGGTGCCTTCGTGACAAAATACATGAATGCCATTCCAACTGTGACCTCTTATGGAAACACCACCATCAAGGCAGAGTGCTACACCCCGAGGGCTGACTCCTTCCACATCTTCCGCGATCCTCTCAAGGGAGACCTGCCCTGGCCTGGGCTCATCTTTGGGCTGACCATCATCTCCCTGTGGTACTGGTGCACAGACCAGGTCATTGTGCAGCGCTGCCTCTCTGCCAAAAACATGTCCCACGTGAAGGCCGGCTGCATCATGTGTGGGTACCTGAAGCTGCTGCCCATGTTCCTCATGGTGATGCCAGGGATGATCAGCCGCATCCTGTTCACAGAGAAAGTTGCCTGCACGGTCCCCTCAGAGTGTGAGAAATACTGCGGCACCAAGGTTGGCTGTACCAACATCGCCTACCCGACCTTGGTGGTGGAGCTCATGCCCAATGGACTGCGAGGCCTGATGCTGTCGGTCATGCTGGCCTCGCTCATGAGCTCGCTGACCTCCATCTTCAACAGTGCCAGCACCCTCTTCACCATGGACATCTACACCAAGATCCGGAAGAAAGCCTCTGAGAAAGAGCTCATGATCGCAGGACGGTTGTTCATGCTGGTGCTGATCGGTGTCAGCATCGCCTGGGTGCCCATCGTGCAGTCAGCACAGAGTGGACAGCTCTTCGACTACATCCAGTCCATCACCAGTTACTTGGGACCACCCATCGCAGCAGTCTTCCTGCTTGCTATTTTCTGCAAGAGAGTCAATGAGCCGGGAGCCTTTTGGGGATTGATCATAGGATTTTTGATCGGGGTGTCCCGTATGATTACCGAGTTTGCCTATGGAACCGGGAGCTGCATGGAGCCCAGCAACTGTCCCACGATTATCTGTGGTGTGCACTACTTGTACTTTGCCATCATCCTCTTTGTCATTACTATCATCGTCATCCTGGCTGTCTCCCTCTTCACCAAGCCCATTGCAGATGTGCATCTCTACCGCCTGTGCTGGAGCCTGCGTAACAGCAAAGAGGAGCGTATTGACCTGGATGCAGAAGACGAGGACGTTCAAGATGCCCGGGAGGATGCCTTAGAAATAGACACAGAAGCTTCTGAGGAGAAAAAAGGATGCTTCAGGCGGGCCTATGACATGTTCTGTGGCCTGGACCAGCAGAAAGCCCCCAAAATGACGAAGGAAGAGGAGGCAGCCATGAAGCTGAAGATGACAGACACCTCGGAGAATCGTTTGTGGCGGATGGTAGTGAACATCAATGGCATCATTCTGCTGGCCGTGGCTGTCTTCTGCCATGCCTACTTTGCCTGAGTCCTGCTCTCTGCTGAGGCTGTGCTTGTGGAGGCTGGAGTCTTCACTGTGTCCCTCTTTGGCCCCATTCAGTGGTGTTGAAGGGATACCAGCCAGTTGTAAACTCTGCCCTGTCGATAAATGTGTACATTTGTAATTACAGGCTAGCTGAAGAAAAATCACTGATTCACTGTTAACTTATATATTCAAGGCCAGTGTGGTACAGTCACCTGTACATATCTGAGCTGCAGAAGGAAATCCCACTCAGTCCAGTGTCTAGGAAAAGGCAGACTAAGATACAGAAGCCCCGTGGTGTCTGATGCAAATTTTTCTCAGGTAGATTCAGCATGCTAACATTGTTTGTGATCCTTAAACACTGCTTAAAGAGTTGTGGCCCCCTGGTTACTACCACTTTCTCTATCTAACCTCCCCCCTCATTTTTTTTGAAAGAAAGCATCATCCTACCTCATGAAATCCTTGTCAAGTTTTCCTGGCACAAGAAAAATCAACCTGATAAATTGACGAACATATTGAAGCTGAGGATGGGAGCTTGATGACGTCTGTGTCCTGGGTGTTTGCTCTTTGAAGGAGAGGCCTGGACATGGTAGAACCAGTGCCAATGAGAGGGATCCAGGCACCAGCCTCAAGCCAGGGGGGAAAGCAGATAATCTTGAGTCAAGAGGATTTTCTGGCTTTCTTGAAAGTGTTCATTGTCAGTTCCTTGTGTTTGAGATTCCATTTATTTTGGCATTTCCTGTGCCTGGACTATCTTAGCCACTCAGTAATGTTTGTGGGCTGAATGGATGACATGTGTATTTGTTAATAAATGCTTGTTTTCTTTTTGGGCGTCCCTGGTGGCTTAGATGATAAAGAGTCTGCCTGCAATGAAGGACACCTAGGTTTGATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCGTGGACGGAGGAGCCTGGCGGGCTACAGTCCATGGGGTCGCAGAGTTGGACACAACTGAATGACTTCATTTTTCTTTTTGGTTAACCTTCTGGCTGCACAGAGTACTCTCTCTGGTGACTATAATGAATCGGGGTGCATTTTCCAGAGGCTCCACTTCCTCGTGGTGCTGATGTAACTGATTCTGTGGGGGCTTAGTCACTGAGTCTGTGTCACATAATGAGCAAACATGCCTCTGGGGGCACTTGTCATCTCAGAGCAGCCGCACTGTCCTGAAACACTGATGCTTTTAGCCCAAGTCCTCCTCCCTATGAGTTCAGGTGGCCACAGCTCTTTTTCCTTACGTGTCTTGATTGGTGATCATCCATTGAACGAGGTTAGAGCGGGCAGTCTCTGTTCCAGGTGGAAGTGTTCAACATTTTTATTTTCTTTGTACCTCGTTCCTAATGAGAAATTTTAAAAATTAAATTTAAATTTGATTAATCCTTTTGGTTCCACCTGTGAAATCTGAATCATTTTGTAATATAATCCTGTGGAAGTCATGATGTTTTTACTGACTGATTTGAGGCTAGCTTAGCAAATAGGTGGGATCTGAGGTTCTGTGGAGCAGCTGAGAGTAGTTCCTGGGGTGTAAAAATGGTTCAACAGGTAAAGAATGGCTTGTTCTTATGAAAGGAAAAGAAAATATTTGATGTGCCCTCATATTCCCCTTACGCCAGGCAGAGAAGAGGGAAAAGCGGAGAATTTCGCATGGCTAGTATTACTCAGAGTACTCAGCTTTGTGGGGAGTTTGTGATATTTTTGAGCTCAGAGAGGATAAAGAATGATGACTGAAAGCTGGTGGGTGGAGCAGGCATTAAGTATCTAGATGGTCCTAGATTCTGTTTCTGGCCTTGCCAATGATTCACTGTGTATATTGTGGTAAATTATTTTTTTCTCAACTGTGTATTTTTCTCTTTGAAAAAATGAAGACCTTGGTGCTTACAGCATATACCTACCTCCTCTAGGTGTGATGAGGTCACTTTGAAAAGTGGATGAGTGAAAAGAGGCTGGCATCTTTCTTACACACATGAAGAATGCCAACAGATGTTATATTAAACTGCATGTAGTCCTTTTCATTAAAGTTTATTACTTTGGTAAAAAAAAATAAAAACATTGAAAAGTCA EMBV3_37768 TATTGGGTCACCATACTCTGCAAGCAACCCAAAGCAACAAAGGACTGGCCAAGAGAGGAG Gene BVV0102_260987 + 0 NULL GK000023.2:31778650-31794776 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33645 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:528342|LOC528342:XM_002699647:140_cdna Constitutive 0 NULL GeneID:528342 X GENE LOC528342 NULL similar to histone cluster 1, H2bd EMBV3_32781 GACTGGCTCTGACCAAGGTGAGGACATTTCTGGAAACTGAGCAAAAAAGGGAAACCCACG Gene BVV0102_235351 + 0 NULL GK000004.2:46958005-46974636 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10051 CAGGTGGTATCAGAAGGACTGTGAGTATGAGGGTGCAACCGTGTGGAAGGTGCATTTCGT Gene GeneID:100336572|LOC100336572:XM_002700424:16_cdna Constitutive 0 NULL GeneID:100336572 X GENE LOC100336572 NULL arylsulfatase H-like EMBV3_10179 CGCGCGTGGACATGGCGCTCGACCCCTCAGATTTCACTAAGTGTTGCAAGGACTCTGGAG Variant GeneID:767824|CMC1:NM_001076548:238_cdna 64^153 2 EMBV3_43475 GeneID:767824 22 GENE CMC1 MGC126984 COX assembly mitochondrial protein homolog (S. cerevisiae) EMBV3_10565 GAGCAACTGTTAAGTGCTCTGGTGATGGGAGCTACAGAAAGCCTCCAGGGAGTTTACTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05001 CACCTGCTTGGCATGAGATTCAGGAGCAGAGTGGCTAGGGTTAGATGGTAGAGGAGAAAG Gene GeneID:525756|RNF169:XM_002693463:46_cdna Constitutive 0 NULL GeneID:525756 15 GENE RNF169 NULL ring finger protein 169 EMBV3_36450 TTTTGCTACTCTGTGAGGCCACCAAAAATGACTCAGAAACAGAAGATCCCCCCTCCAGGC Gene GeneID:515305|PLEKHH1:XR_083784:420_cdna Constitutive 0 NULL GeneID:515305 10 PSEUDO PLEKHH1 NULL similar to Pleckstrin homology domain-containing family H member 1 EMBV3_01656 TTTCATAGCTGCACTGGGTCATCGTTGCTGCATCCAGGCTTTCTCTAGTTGCGGAAAGTG Gene BVT0102_049676 + 1 EMBV3_26514 GK000011.2:78962422-78968969 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028581 TCONS_00028583 TCONS_00028582 TCONS_00028584 1 XLOC_015510 NonCoding TCONS_00028584 XLOC_015510 NonCoding NonCoding LOC100847529 11:78963560-78968883 = TSS20026 552 0.530797101449275 3 0.89684329199549 0.00133052081188133 2.93691314594674e-05 1.38909495244531e-15 0.000857493150307486 4.65095719547649e-05 3.65946176110295e-05 0.000137341288161483 0 3.03830214124178e-11 7.85132059097506e-05 7.05002269277423e-05 8.09709493122742e-06 0 0 7.58453752977682e-33 0.00410361010240578 0.00306998864803861 0.00416679165012877 0.000268486925987329 0.00212841209147287 0.00108062479899686 0.00828520123480327 0.000616106454117596 0.00209260984962199 0.000173175337311742 0.000929291910566643 0.000285728575046435 0.000184156981160937 0.000140710545305283 0.000260983465129915 NM_001192140.1 TBX21 Bos taurus T-box 21 (TBX21), mRNA. 3e-42 176 73.87 0.5 NM_001006657.1 WDR35 Homo sapiens WD repeat domain 35 (WDR35), transcript variant 1, 2e-14 84.2 73.28 0.235507246376812 0 noncoding 1 1 1 1 -1.35253791627253 0.0771050660375509 -0.0434298103671971 0.450269249313471 AAAGCTTAAGCAGACGCAGCCTTGGCAAGTGTGCTTCTGCTATAGCTGCTGGTCCCGCTTGCCTGATCTCCAGAAAAGCAGTAGCTTGAAAAAATCTTAAAAACGAGATTATGATGAAAATTTACGGGACACCAGTTCAATCCCTGGTCCAGGAAGATCCCGCATGCTGTGGAGCAACTAAGCCTGTGTACTGAGCCTGCATTCTGGAGGCCATGAGCCACAACTACTGAGCCCACATGCAGCAACTACTGAAGCCTACAAGCCCCAGTGCCTGCGCTCTGCCAACGAAAGAAGCCGCTGCAGTGAGAAGCCTGCATACCACAGCTAGAGAGTAGCCCCCACTTTCCGCAACTAGAGAAAGCCTGGATGCAGCAACGATGACCCAGTGCAGCTATGAAAATAAAAAATAAATTTTTAAAAAGCTATTAGAAACAATTCAAATTGTAAAAACAAAAGCAAAAAGTCTTTAAATGCCTCTTTATCACTTCTGAAAGTAAAACAGAGAACACTTTCAATGCGTATTTAATTAAACATGACTAGAAATAGAGCTCA EMBV3_31055 GCGCGCGCAGGCCTTCCGCCGGCTGGAGGAGTGGCCCTGCTGCAGCTGATGGGGACACCA Variant GeneID:511085|C7H19orf60:NM_001075490:44_cdna 190^394 1 EMBV3_37313 GeneID:511085 7 GENE C7H19orf60 C19orf60 MGC142646 chromosome 19 open reading frame 60 ortholog EMBV3_19073 GCAGAACTGTGATTTCGGACCATATAAACAAATGGAAAGATGGAGCCACTTCATCACACC Gene GeneID:616080|RNFT1:NM_001076407:60_cdna UTR3_Alt 2 NULL GeneID:616080 19 GENE RNFT1 MGC138043 ring finger protein, transmembrane 1 EMBV3_02941 AGCTGCTGAGCTTCATGGCACCTATTGACCATACCACAATGAATGATGATGCCAGGACAG Gene GeneID:786013|AATF:XM_002695618:7_cdna Constitutive 0 NULL GeneID:786013 19 GENE AATF NULL apoptosis antagonizing transcription factor EMBV3_29395 TGCCGTGTTGTTATTTACACTCTGACAGCCATCATGTGGTAGGTACTTTCTCAGGAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02068 GCATGAGCCAAAGCGAGGCACAACTACTGGCCTCTCATATCCTGGTCGCAACTTAACGTT Gene BVV0102_086436 + 0 NULL GK000001.2:77932255-78012413 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004079 TCONS_00004092 TCONS_00004072 TCONS_00004085 TCONS_00004094 TCONS_00004080 TCONS_00004071 TCONS_00004077 TCONS_00004084 TCONS_00004076 TCONS_00004083 TCONS_00004095 TCONS_00004086 TCONS_00004096 TCONS_00004089 TCONS_00004093 TCONS_00004073 TCONS_00004078 TCONS_00004087 TCONS_00004070 TCONS_00004074 TCONS_00004081 TCONS_00004090 TCONS_00004075 TCONS_00004088 TCONS_00004091 TCONS_00004082 1 XLOC_000971 Coding TCONS_00004077 XLOC_000971 Coding Coding TP63 1:78010602-78185601 j TSS2052 4733 1 TCONS_00004077_3 467 12 0.97302254882913 0.00107143857280067 0.00062124107041417 0.00020839203780347 0.000202276119536838 8.02277331648112e-05 0.000166238106838842 2.16041801128894e-15 6.21200612085369e-27 0.00143200477401589 2.38083370177578e-49 2.28431209469341e-55 1.06453637856316e-79 2.65825753859457e-05 3.85513141753574e-12 2.74006000827658e-46 9.04037033458769e-80 6.54289258875641e-199 2.40056867762249e-32 6.59245712302755e-08 0.000854049758046683 1.90664054927993e-09 5.72864499315247e-14 4.48407081234608e-63 9.46451445396052e-50 6.63596588640343e-05 0.000516860241981274 6.15541948486078e-11 6.03139682945192e-06 6.78350096774421e-15 9.55852806418682e-15 XM_005201548.1 TP63 PREDICTED: Bos taurus tumor protein p63 (TP63), transcript variant 0.0 5746 100.00 0.672934713712233 XM_005247847.1 TP63 PREDICTED: Homo sapiens tumor protein p63 (TP63), transcript 0.0 3900 79.69 0.918022395943376 TCONS_00004077_3 sp|O88898|P63_MOUSE P63_MOUSE Tumor protein 63; 0.0 905 97.84 0.980728051391863 2 coding 0 0 0 0 -0.0460702435153966 0.792940382645539 0.0101555733101852 0.83337127877018 GAAACGGTAAAGACAGATCTACAGGCTCTGGGCTGAAAAATATTTGGTTTCCTCAGCAAGAAGGAATGGCAAAGGACAGATTACTCAGAAGGAAGTTTTTTTGAATTGACAGGTTTGTAGAAACCCCAGCCCATTTCTCTTGGAAAGAAAGTTATTACCGATCCACTATGTCCCAGAGCACACAGACAAGTGAATTCCTCAGTCCAGAGGTTTTCCAGCACATCTGGGATTTTCTGGAACAACCCATCTGTTCAGTTCAGCCCATTGACTTGAACTTTGTGGATGAACCATCAGAAAATGGTGCAACAAACAAGATTGAGATTAGCATGGACTGTATTCGCATGCAGGACTCGGACCTGGGTGACCCCATGTGGCCACAATACACGAACCTGGGGCTCCTGAACAGCATGGACCAGCAGATCCAGAACGGCTCCTCGTCCACTAGCCCCTACAACACAGACCACGCGCAGAACAGCGTCACGGCGCCCTCGCCTTACGCACAGCCCAGCTCCACCTTCGACGCCCTCTCACCATCACCCGCCATCCCCTCCAACACCGACTACCCGGGCCCACACAGCTTCGATGTGTCCTTCCAGCAGTCAAGCACGGCCAAGTCCGCGACGTGGACGTATTCCACTGAACTGAAGAAGCTGTACTGCCAGATTGCAAAGACATGCCCCATCCAGATCAAGGTTATGACCCCACCACCTCAGGGTGCTGTCATCCGGGCCATGCCTGTCTACAAGAAGGCCGAGCATGTCACTGAAGTGGTAAAAAGGTGCCCCAACCATGAGCTGAGTCGTGAATTCAATGAGGGACAGATTGCCCCTCCCAGTCATTTGATTCGAGTAGAAGGTAACAGTCATGCCCAGTACGTAGAAGACCCCATCACAGGAAGACAAAGTGTGCTGGTACCTTATGAGCCACCTCAGGTTGGCACTGAATTCACGACAGTCTTGTACAATTTCATGTGTAACAGCAGTTGTGTTGGAGGGATGAACCGACGTCCAATTTTAATCATTGTTACTCTGGAAACCAGAGATGGGCAAGTCCTGGGCCGCCGCTGCTTTGAGGCCCGGATCTGTGCTTGCCCAGGGAGAGACAGGAAGGCGGATGAAGATAGCATCAGAAAGCAGCAGGTCTCGGACAGCACAAAGAATGGTGATGCTTTCCGTCAGAACACACATGGCATCCAGATGACATCCATCAAGAAACGAAGATCCCCAGATGATGAACTGTTATACTTACCAGTAAGGGGCCGTGAGACTTACGAAATGCTGCTGAAGATCAAAGAATCCCTGGAACTCATGCAGTACCTTCCTCAGCACACGATTGAAACCTACAGGCAGCAGCAGCAACAGCAGCACCAGCATTTACTTCAGAAACAGACCTCGATGCAGTCTCAGTCTTCCTACGGTAACAGCTCCCCACCTCTGAACAAAATGAACAGCATGAACAAGCTGCCTTCCGTGAGCCAGCTTATCAACCCTCAGCAGCGCAACGCCCTCACTCCCACCACCATTCCTGATGGCATGGGAGCCAACAGATTTGGCAAGTCTAAAAATCCCTGAGCAATTCCGACATGCCATCTGGAAAGGCATCCTGGACCACCGGCAGCTCCACGACTTCTCCTCCCCTCCCCACCTCCTGCGGACCCCAAGTGGTGCCTCCACAGTCAGCGTAGGCTCCAGTGAGACCCGGGGTGAGCGTGTCATTGACGCTGTGCGCTTCACCCTTCGCCAGACCATCTCCTTCCCACCCCGAGATGAGTGGAATGATTTCAACTTTGACATGGATGCTCGTCGCAACAAGCAACAACGTATCAAAGAAGAGGGGGAGTGAGCTGAGAGTTGTGGTGCAGGCTCTTCCCATTTTCCCATCTTCCCCCAACCCCAACAACAAGGCACTACTGCTTGTCCAGCCAAGCATTCTCCCTAGCTCATCTCTTTCCTCTTTTCAGTCTGGTTTCTTAAGGGAAGGAGAAATAAGAGGCTGCGTTTTACCTATGTCTGACCTGGCGCCTGATTCTGTTTCTGGCTTTAAGCCTTCAGCTCCCTTGTTTGCAGGACTGAAATTGTCATGGCTATGCAGAAGTGAGCAAAAAAGCAGTGGGTGTCTCCTTAAGTGGCAGAGAGCTCTCATTGACTTTTATAAAGCATTTTCACCCCTATAGTCTAAGACTATACATATAAATATATAAATATACAGTATGTATTTTTGGGTGGGGGCATTGAGTATTGCTTAAAATGTAATTTAAAGGAAAAAATGGAGTTGCACTTATCACCTTTTTTTTTTTTTCTAATTTACTTGTTTTGGATGGCTTATCTATAGGCCTTCTCTCAAAGTCAGCCATGAATGGTAGTAGGTATCTAGATCTTGATAGTATATGTGAGTGACAATGACATGTAGGTGCCTTCAGTTCTTTTGATGCTAAACACATGTTACACCCCACCTTTGGTTTGATCTACTTGTTATTATGTGGGTGAGACTGGATACCTATGTACACGATTCTCTACGTTGGTGTATTTTATGTTACTGATATCTCCACTACTGATGGTGGTTGCCTTCGGGGTGATATAGCTAAATTACAAGAAAAAGTCCGTGTTTACACTATCACTCACCAGAAGAAAAGAAATATCCTCCCTTGCTTTTGGTTGGGATTGGGGAATGTGAATAACGGCCAAAATCCTTAAAAAGTCATTGCAGCCAGTTCAGTAGCACCTGACACCATGTGTCCTGGTATATCGACAATCTCCTCATATTTAATGCCAGACACACCTTAACTCTCAGTATTTATTGGCAAAGCATTAGCTGCCAGTACAAAAGCTTGAAAACTAAATTTCACAACTAGATTGATTAACTCAATTACATATTTGCTACACTTGTTTAAGGTTAGCAAATTAAGGTTGATTTGATTGGGATGAATGCACCTATCTAGTTCTCGCAATAAATCTTTAATATGTATTAAGAATATCCAGGAAAAACAGGAATCTTACAGAGATATTGCGTCTCCACTAAACAGTAAGAGATCTCAGTAAACCATGAATTGAAGCACTTGGAAGACTTTTTGAAACATAAATAGTATTATTTGGTAAATGTTTCCTCTAGTGACCCTCACATTCTATAAAATTCTGCTTATAAAGGCTTGTTGATCTTTCTGTCTTCAGGGTTTAAAATAGGGGTATTGATTTGGAAAATGTAAAATTATGAGATCCGTTTTCCTGTAGCATCAGTTGTATCACTACATCACTTATCTTTTTGAATAATATTAATTTTACTTATATTGAAAGTAACTGTGAGAACCCAACTTCCCGTCCATCTCTCTTCTGGACTGTGCACGTGCTTAAAAATATCCCAACAGATTAGAGGGTAAGCTTTCCATTGGAGATGTTGCTTGAACCACATAAGCAGAGACTTCTCTTCAGATTCAAAAATAAAAGTGTAAATGGAGATATTCCTATACATCTTTTAGAAACATACTTTGTAGCAGATACTTTTTTTTTAAACCACAAAACTGAGTATTTTGTATATATTGCTAATGAGCTCTAAAAGCCTACTGTGCCTTTTGGTAAAGGGCTATCATTGCACATAAGCATCAAGTTTTATTTTAAAGTGCAAAAGGGCTAATGTGGCTCAAAAATATATGAGTTTCACCTGAAAAGTGTATATATATTTTGTGTGTGAAATTGCATACTTTGTTTTATTATCTTTCTCTCCTTGGGATAGTGGGTTTTCCAGAACCATTGTTGAGATTTTTTTTATTATTGTTATTGTTTTTGTATTTTCATGAAACACCATTTAGTGAAACTACAATGTCAAATTAAAAAAAAAAAATGCCATTACTGTAAGACGGGGGGAAGGGAAAGTTGTTTTTTTTATTATTTTTTTTAAATTTTGTATGTTAAAGAGAGTGAGTCCTTGATTTCAAAGTTTTATTGTGCATAAATGATAATAAGCACTGCTAATATGTGGAACAAGCATGCAGGTTTGAAAGCCTGTTGATGGGAGAATGAAAGCCGTGCCTTTGCAATGCTAGAAGGACAAATGGCTTCCTGGACTGTCCTGAGCGTTTGAATAAACAGAGGACATCTGAGCTATCTCAGCACTATTCGGGTAGCACTAAGGACTCAAATTCCTGTACTGTACATCATGGGTTTGGCATGAGCCAAAGCGAGGCACAACTACTGGCCTCTCATATCCTGGTCGCAACTTAACGTTTTTTGAGTGTATGAGTAACTAGCATAAGGGGAGAAAGAATATTAAGGACAGACAAGGGGGCATGGGCTTAATGGAGTTCTAATGTGGTCTCATTACAGTACAGATGGCTGAAGAATGGATACATTTTTGTTTGAAGTTGATTAGAAATGGAAATGGAAGATAGAACTTTCTTCATTAAATCCATTTACCTTTTGTTTTCTTGATATTCCCCTAAAATACAGTATGTGGGGTATTGAATGTTTAAGGGTTGCATTTTTTTTATTATTTTTATAATTGTGAAAAACTAAGTCAATGCCAAATGTTTTATATGCTTTATTAACGTTTTTGAAAGTTTTTTTTTTTTTTTTCCTTATAGATGTGATGCTTTTTTTTTTTTTTTTTTTAAGTTTCAGTTGCTTGTCTTATGGAATTTGGGGCAATGGGCTTTGGATGAGCCAGAGGCAAATCCACAAGCCAATTATGTTTGCCAGGACATGCAATAAAATTAAAAAATAAATAAAATTTGCATTGAGAAA EMBV3_40405 CTCTGAAATATTTATGGCTTCAGTCTATTAGAATGGAAGATAATGCAGGTATTTCTGTGG Gene GeneID:338044|SLC38A2:NM_001082424:58_cdna Constitutive 2 NULL GeneID:338044 5 GENE SLC38A2 NULL solute carrier family 38, member 2 EMBV3_37927 TCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCGTTCTCCATC Gene GeneID:539166|LOC539166:XM_002692133:102_cdna Constitutive 0 NULL GeneID:539166 13 GENE LOC539166 NULL similar to MGC139200 protein EMBV3_24369 ACTCAACTGGGATTAGAAGACTATCAAACTATATGTATGTTTCAGGATATTTGACCTGCC Gene GeneID:531877|PTPN12:XM_002686751:30_cdna Constitutive 2 NULL GeneID:531877 4 GENE PTPN12 NULL protein tyrosine phosphatase, non-receptor type 12 EMBV3_37259 ACATTAGGGTCTTGTTCATCCTCAGATTTTGGTATCTGTGGGGGGACCTCGAATGAGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26889 GTCAGATTGATGTGCACATTTTCAACGCAGATACTCACAAGTGGTCAACACCCCGAGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28064 TCGACCAAGGGAAAGCAGTCCAACACCCATATCCTAGCTTGGTTTGCAGCGACCTTGACA Gene GeneID:617594|TMEM149:NM_001099167:763_cdna Constitutive 0 NULL GeneID:617594 18 GENE TMEM149 MGC152593 transmembrane protein 149 EMBV3_09078 GACCCACGAGTGTCTGGTCAAGTCTGGTGATCTGCTGATGAGGGACAACCTGTTTGAAAT Gene GeneID:530879|PLEKHA2:NM_001035383:85_cdna Constitutive 0 NULL GeneID:530879 27 GENE PLEKHA2 MGC128862 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 EMBV3_04968 CGTGTAAGAGTCTTCGAGAACTACAGTGAGTAATTAGGAGGGGAAAATGCTGCTAATGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43462 GTGTTCGCCCACTTCACCTCAGTCAGCACCTCCCAGTTCTTTATTCCCAAAAGCCAGACT Gene BVV0102_392862 + 0 NULL GK000016.2:42548111-42559930 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12964 CTGGTCACTCACCAAAGAACCCACAGTGGAGAACACCATTATGAATATAGTGAGTGGGGG Gene BVT0101_056950 + 0 NULL GK000023.2:30247930-30264927 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134810 TCONS_00134809 TCONS_00134811 1 XLOC_081544 Coding TCONS_00134809 XLOC_081544 Coding Coding ZNF192 23:30260568-30294439 j TSS100421 10756 1 TCONS_00134809_4 492 0.182688731870584 8 0.682669028638913 4.48801024802475e-07 1.94020528239103e-09 0.000110556660201443 5.35170111660483e-09 1.57734412103348e-05 9.39304596990136e-11 9.53159845888184e-14 4.68908971185122e-05 0.000172366818383026 4.58035932306215e-50 7.33470475739306e-71 9.12076358548766e-36 0.000119980802889291 9.51905666912161e-05 1.30586980509186e-05 3.90339757837382e-09 0.000296213587266687 7.18930221212021e-05 5.12991774648504e-12 2.81637120328167e-05 4.98222001074133e-06 0.000109596643581745 2.7984018188274e-40 8.01016767191881e-05 3.08896892158843e-05 4.71711170107214e-05 1.82365074207809e-05 1.01949407593881e-09 8.16171244227624e-09 2.0949949350886e-07 NM_001100344.1 ZNF192 Bos taurus zinc finger protein 192 (ZNF192), mRNA. 0.0 2547 100.00 0.131182595760506 NM_001278121.1 ZKSCAN8 Homo sapiens zinc finger with KRAB and SCAN domains 8 (ZKSCAN8), 0.0 3730 78.62 0.405076236519152 TCONS_00134809_4 sp|Q15776|ZKSC8_HUMAN ZN192_HUMAN Zinc finger protein 192; 0.0 832 92.71 0.890243902439024 10 coding 0 0 0 0 -0.0258693816098509 0.894855894862987 -0.0132744466647851 0.797065156947642 CGGAAGTGGCTTGGGGCAACATGCATGTTGGCCGGCGGTGTGCCTCTTCACGTCTGGAAGTTAGGGGCTGGAGGGTCCTGGGCCGGCTGCTGCTTTCGCACCTCTCTTCTTGCAGCCGTTCCTGTGGGTCTGTCCACCGTTTGTAGCATCCTTCCCCACCGCGGGCCGCCCCTGGAACTCACGGTCCCAGCTCGTCCACATGGACATAGGGTACTCTGGGAGGAGTTGATGCATTCAGAATCTGCACCGGAGCCTCCAGATACTCAGCTCCAACCTGTGGCAATGCAGCACAAATCTGCAGTTCTCCAAGGGCCACATGATAGAGCCATATCAGTTTCACAGAGTCCTACCCCTTCCCAGAAAGGAAGTCCTCGAGACCAGGAGATGACAGCTACACTGCTTACAGCAGGGTTCCAGACTTTAGAGAAGATTGAAGACATGGCTGTGTCCCTAATTCGAGAAGAATGGCTTCTTGATTCATCCCAGAAAGATCCGAGTAGAGATAACAGGCCAGAGAATTATAGAAACATGTTCTCCCTGGGTGGTGAGACCAGGAATGAGAACAGGGAATTAACTTCAAAACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCGGGGGTCTTGAGCCTGGAGAAGCCCGAGACCTTCTGGGCTCATTAGAGAGGCAGCGGGGAAATCCCACCCAAGAGAGACGACATAAATGTGATGAATGTGGGAAGAGCTTTGCTCAGAGTTCAGGCCTTGTTCGTCACTGGAGAATCCACACTGGGGAGAAACCCTATCAGTGTAATGTATGTGGTAAAGCCTTCAGTTACAGGTCAGCCCTTCTTTCCCACCAGGATATCCACAACAAAGTAAAACGCTACCACTGTAAGGAGTGTGGTAAAGCCTTCAGTCAAAACACAGGCCTGATCCTGCACCAGAGAATCCATACTGGGGAGAAGCCATATCAGTGCAATCAGTGTGGGAAAGCTTTCAGTCAGAGTGCAGGCCTTATTCTGCACCAGAGAATCCACAGTGGGGAGAGACCCTATGAATGTAATGAGTGTGGGAAAGCTTTCAGTCATAGCTCACACCTCATTGGACATCAGAGAATCCACACTGGGGAGAAGCCCTATGAGTGTGATGAGTGTGGGAAAACTTTCAGGAGGAGCTCACATCTTATTGGCCATCAGAGAAGCCACACTGGGGAGAAACCCTACAAATGCAATGAGTGTGGGAGGGCCTTCAGTCAAAAGTCAGGCCTTATTGAACATCAGAGAATCCACACTGGAGAAAGACCCTATAAATGTAAAGAATGTGGGAAAGCTTTCAATGGGAACACTGGCCTCATTCAGCATCTGAGAATTCACACAGGGGAGAAACCCTATCAATGTAATGAGTGTGGGAAAGCCTTTATTCAGAGGTCAAGTCTTATTCGACATCAAAGAATCCACAGTGGAGAAAAATCTGAATCCACAGGAGTTTAGGGAAAAACTTGAGTCATAGATTGGGCGTTAATTCAACATTAGAGGAACCGTGTGCTGGTGAGAGGTCTTTCACTGTAAAAAAAAAAAAAATGGCAGAAAGTTCAACATATTACAACCTTATCTAGGGTCCGATTGATAGGGGTGGCAAAGTTAGAATAGCTCTTCAGTAGTTTGGGTCCAGTGCCTTGATACAAATTAATTAGCTTGACTATCTTAGGAGGTGTCTGATAGAATGGAGCTCCTGATGGTCTGATCCTTTAGAAGCTTAAAATAGCATTAGAGAAAACTGCTTGTGTGGCTTGAGGCACTTAACTTTGTCTTTTGGTGAGTAGCTGTAGGTTTGAGAGTAGCTACTCCTAGTTCCTCTGCTTCTTCCGATCTCCTGTGATCCCTGTCTCCCATTTATTCCCCTAAAGGTGCATTTTGTGCTCCTAATCTGATCTAAGAAGCTGTTTTAGAGTTTGAAGCAGCCTCTGTATGAGACTTACACTTATATTTAACTTTCTGAGCTCCTAGTTCTAGGGAAATTTTTATAAACACTTAATGTATTTATGCTTAAGTGTACATTTTATTTTATTCTAATGCTCCTGATAGTGGAAATCCATATTCCCATGCAAACTCAGAATGCTATATTTTTAACAGCACTCCAGCATTTTCCTTCATATATCACCTTCACTGACTCCCCTGAGTCCCTGAGCATCCATACGTATCCTTCACCACCCCCAGCCCCAGTACCTGTGTCAGCAAAGGAAGTGGACGCATTAGTGATGGTTGTGGGAATGATGCAGAGAAAGAGGTGAGTGGAGACTCAGCAGCAGCAGCTCAGCTGCTCTTGAGCTTGGATGGCTATACCTTTTGGTAATTTGACTCTCCTTTCCACCTTCCCACTGTACACTGTGGTACAAATAGGTATTTATACTATCCTCAATAAGACATCACATGGGGGAAAAAGACAGGTGCTTGAAGAAGTCTTAAAAATCCTGCAAAGAATGTACACTCATCTCTTTTGGTCCATCACAGTACTGTTCTCTCAGGTTCCTGTCAGTCTGTACAGACCCCCTGACTGGATGGTCTGCCACTCTTGCTTGACCTTGAACCCACCTCCTTAGATGGCCTCAGCACCTCACTCACTCTTTATCTGTTTCTTGCCGTTAGCTTTACATATCTTCAGTGTTCATTGGTTGAGTATCTCACCTAACAATTCCTCTTTCTTCTGAATTCTGGTACATTCCCTCTATAATCCAGCAAAGACACAATATTAAACTCATCATCACCAGGCACTATATTTCATATTTGAAGCTTTCAGTATACCAAGGGATACTGTATAAAGTAATGAGGCTGGTTTAAAATTACCACCAATAACTTACAGAAGAATCCAAATTTGGGTTGTCTTTTTAAATTGGGCAGTTCTAGCTATTCTAGTAGTACTGTTATTCCCAGTACTACCATTCCTCTAGATATTTGGAACACACTCAAGATTCCCATTTAATACACCATTCAAGAAAAACACTCTGTTACTCTTCGAATTTCATCTCATCTCTGACCATCTGGTTATGCACTTATTCACCGTATTTGGAATTGAGTAACTTTTAGCTATTTCCAAAATCATCTTTCAGAATGGGAATTTATTCCATTAATCTTATTCAGAAGAATATGAAATGAAATGAAAGTAATTTCATACTTGTAATGAAAGTTCCAAGAGAAATTATACATTTTCACACTGTGACTATCCTGAACAAGGACTGCACTTACTAATAATGTTTTATGATTGATGTTTGTAAAAGTCAGTCATAAAATAATACATCATAGAGGTCTGCCTTTTGGATCATAAATTCCTTCTCTGTAACATCCCTTCTGTACCCCACTATGGCACATATTGATTACTAATCACATCAGAGTTATCTACACCTATTTCATTGAACCATTGATATCCACTTGTCATTTGTCATCCTGGTTTCTTTGGTTAACTTTTTCAAAACAATGCTTTTCTTATCTTTTATTTTCTTCTCTTCTCTTTTCCCTCTGCTTCTCCCTCTTTTTAGCCTATAGATTACTATTCCTAACTCCTTTGTACTTGAAATTACAAGAAACCAGAAACAAATCTAGTTGTCTCTAGATCTTTGCTCTCTGCTTCAGTTGTGCCTTACTTTCCGTAAAATACTAATTCTGCCTGAGGCCAATGTTACCTGTGTATAAATATTATACAAGATGGGTACGTTGTCAGAGGGAGAGTGTGTGTATGCATGTGCATGTATGCACACAGTCCTCGCAAATAGTTCAGAGGAACAGTAGTCTTCCAGTGAAAGCTGTTAGCAGAGCACCGTGGTATTGAAATGACTGTAGATGTACCAGCTAACATCACTTTACATTACTCAAAGTAATGTAATTACTCAAAGTAAAGTAAAGCCAGATTACTTAACTCTTAGAATTACTGAGCATCTGGCAGAAATTTAGAGAAAAGAAAATATGACCAGAAAGATGAGTATTATACTGGAATGCATGTGAGAAAAGACTATGACTTGACAGAACAATATATGTCAAGGCTGATTCAGCACACCTATAGATGTAGCCAAATAGTTTAAGACAGCAGAAAAGGGCTGTTGTTTCTTTGTGGGCATAAGTAGAAGTCCTTTCTTGGTCTACAGTTTTCACTCTTAGCATTGATCCGTCTGTATGACCTTACTTTGAGCTCCTAACTATGAGTGACAGCACTAAATTCCTTTATCCTGCAGATTCTATTTTTATACTTGTAATCTGAAATTAACTGTTCACCAGTACTTTCTTCTCCCATCCTCAACTTTTTAAGACCTGGCATAATAAAGTGGTTCTTCTGTAACAGTTGCCATCCAACATGGTCCTAGGAGAGACATCTTAGGTTTCAAAGACTTTTTGCATTGAGTAAGGTGGTCGTGGTTGATTACCATATAGAACAGTTAGTTTTATTCTTGGTTCTGAGGGTCTAGCTATTGCTTTTATTTATTGAGCACTTACTGTGTGCCAAACCCTAAGTTATGTATTTCTCGTGCTTATGATAGATATTTTGATATCTTATGATATCCTCCATTTTATAGATGAGGAAACTGAGGCTTAGCTGAAAAGTTACTGGGGAAGGAAATATGCAGTATAGTGCAAATCCATTACAATTACTGGAAAATTGGTTGAAAATGTCATTTTGGTTTAGTATATCATCTTTAAATGTTGATAATTTTGGTGCTTTGTAGTATTAGAAAGCTAAATTCTACAAGTAAAACATGTTTAAAACTTGGGAGGAAAAGCAGTAACTTATAACTCAAAATATACTTCTCCTTAAACTGCCCCAGGGAAAGTGGCATTATGGGGGAAAATGAAATATCCTTGTCTTAGCCCAAGCAAATGGACATTTAGGATGACAACAGTAAGTTCACCTACAGCATAAGATGTGTAAAAGCTTCAATTTTAGTGCTCATTTCCAACTACCATTTTCTTCTTATTCTATCATTCATGGTTTTTCAAACATGTCGTCTGTTGTTAAACCCCATTTCCTTATTAATGCATTCTTAAAACTCGTTTTTGGCTTTTGTACTCACTCCACTGAAATGTCCTCAGAATCACCAGTGGATAAATATTAATGCCTTTTCTTAGCTCTTATCCTTTTTTTTTTTTTTTGGTCAACCCAGGTAACGTGGGACCTTAGTTCCCTAACCAGTGGTTGAACCTGTGCCCCCTGGGATGCAGAGTGGATACAGAGTCTTAACCATTGGATTGCCAGAAATGCCGCAGTTCTTGTCCTTCTTATATTTCATAATTTTTTAATTGACCCTGCATCTTGGGAATTCTCCTTTGAGAATTGGTCGCTTTTCTTCACTTTTAGCTTTTCTCTATGCATCTTTTTTTCCTCCTGTCCACTGAAAAAAATATCCTTGTCTTAATTTTATTCACTACTTTTTCTATACTCCTCTTTATCCATTTGGATTATTTATACTTCTATATTTCAGTAACTTAATATTTTCTACCCTATGGGTTGTCTCTTAACTTGTGAACTTTTCCACGGGTACTTATATAACTTGGTATTTGGAGACAGAACTCATTACTGTATCCCCATTTTCCTTTTAAATAGGCATCTTTGGTTAACATCTTTATCCTTAACAGACTTACCACCCTTCCTATTTCTTATCCCAGAGTTGGAGTGGTCTTTTAGTCTTTTTCTGGTTTTCACTGTTCATGTCCAATATCTTGTTAAGTTATTCCAATTCTTAGTTTTCTCCTTGAGGCTGAATTTTTTTTTTTTTTTCCTTCCCATGTTTCTGCCATTTCTTCGTATCCTTCTCTGCAGATCCATATCATCTGAGGCCCAGGGTATTGTAATTCTTAATTTTCAGTTTCCTTGCTCCCAAGATCCCCACCTTGTTTGCTTCCAAGATTGTCCTCCTCAAACTCCATTTTTCTGATGTCTCATTTCACAAGATAATCAAGATAATTTTCACATCAGGTAATTCCTATCAGAGCAGTGATAGAACCTTGTCCTCTATTACCTTGTCCTCATGTTTAATCCACCTGAGCCTCATTTCTCTCTAGCATATTCACCTTGATTCATCATACTCACACTTCTGTGACCTTCCACTGATGTCTCTTATAAAGCTCTTGCCTCTGTGCCTTTTTCATGCTGTTCCTTTTGCTTAGATTTCTCTTTGGCCCCAGCTCATGTTCATTACTCCCTTCAAAGCCTAGCTTCCATTATATCTTCTGAGTGAGCTCTCCCTGGTGATTTCACCTCACTGAGACCTCCCTTACTCTGTGCTGCCTCAGCACTGATCCTTTAAGTTTGTAGTGTGGTCCATGCACTTACTAATATGTTGTTTTGTAATTATTTTCTAGCACTCTGTATTGTAGTTTCATGTTTGTATTTATTTCCAAAATTAAATTGTAAGCTCCTTGAGGGCAGGAATAATAACTTTTACATTTGTATCTCTGCACCCCTTAGTGCCTAGTACAGTGCTGAGCACATAGTAGGCGTTTAATAAATGCTTGTCAAATTATTGTGTGCATTATTTATGGTGTTCTATCTACAGAAATATTTACACTGCTTTCAAGGACATATGTCTCTTCATTTTATGCACAGACCCATTTCCATTATACATCAATAACTGCATTGAAGATGGAAGACAAAAAAATTTAATGTTAGGGTATGTGTGAAAAGTTGAAATGTGAAACTTTTCATTTGTTCAGATTTGTTTGTTGGTTAAGAAGGAAAATAGGAAACTCTAAAGATTACTGCTTATCATTGCAAAAGTGCTTGAAAATAGGCTTTTTGTGTCTCAGGTAGACCATTGGTTCCTAACTGGAGAAATTTAACAATGTCTGGAGACAGTTTTGGTTGTACTATCAAGGGATGGCTGGGATACCACTGGCATCTAATGGATAGAGGCTAGAGATGTTGCTAAACGTTCTGTGTGCACAAGACAGCCCCCACAAAAGAAAACATACCCAAGTTCTATATGTTTCATAGTGCCCGAGAAACCCTGGTCTAGGTATATTTAAGGTATATAGCAAAAGGGAGAGAAAATACTAGATTTTTTTTACAATTAGAAAAATCAGCTATGCCAAGCTTTATGAGAATCTGTTTATATATTTTATAATCTGTAATATTATGAAAGCCTTAATGTTTGGAGTTCACAGCAACATACATGTATGTTTTAAGGTTGCTCTCAGCATCAGATCTGCCTTCCAAAGTGGAAGGTGTTGTAGGAGTACAAGTCTAGTTTTAGCCTTCTGTATCTTGTTTTTTCCCATAAAATGAAAGATAAAACACTGGGGTCTATCTCTTTAGCAGGGAGCCTACAAATCAAAGATTTAGCTTTGGGGACAACACGTGACCATAAACCACCCCTTGGGCAGCCACTAGACAGGAATGACTGCTAACTCCTAAGGAAACCCCAAGCAGACCCACATAAAGTTTTTAACATACTCTTAATCCTGCTTAAGAAGACACATGTAGGGGGAAATATGGCTAGTCAGAAATACAATTAAGAAATTAAGTAGTGTAAAAGACAACTTTTTAAAAACTAGTCTCTTTTTGCAACTCAATGGTACTTTTGATAGATGTTAAAAGGATCAATCCCAGAGTTAGAAAAATAAGTATGTAATACATCAAAGAAATAATTGTGCTCTGATGTGTTTAATTAGTCTGTAGAATGCTAGGTTTGGAAGTGACTTGAAATCATTTTCCAGTCCATTATTCTGTAAGGGAAGGTCCTAAAGAGGTCATGTGGCTTGCACCAGGTGATCCATTAAGTTAATGGTACAGGTGGAAACAGAATCCAGGCTTCCGGAGGCTTTGCTTCTTTGACCAGTTATGACCCTTGTTTTATGTTCTTGATTCATACAGTGCCATAGAATGTATTCATACTTAGTGCCGCCTCTTGTAGTGTTTTTAATCAGCTTGTATGTCCAAACCAGTACACTGGTGTCCTGAGTTCTTTAATGAACGCCTGAGTAGTCCAAGGGATTTTGCATTATTGCAGCCCATTTTTGAAGGTCTTGCTCTCTCAGGTCGGCCCGTAATCTTGGAGAAAGCACATAGGATGTGCAGCATTGGCATTCAGAACACTAACGATGAAAACCGGAGCTCCTGCCGTCCAGTGTGTCGGTTTTAGGAATCCTGTAACACTGGAGATGTCCTTTCCCAGCTGAAGTCTTTAAATTCCAATATTCAAGGCTGGTTCTACCCTGGGTAAAATCAGGAAGTAAAAAATCACCTTTGTGACGGGTGAGGCAGGGATTGCGAATCTTGGTAAAACTCGGTTTAGGTGCTCTCACAAAAATAAGCAGGAACGAAACCTGCAGCCAGGCCCCGAACCCACGACTGGCAGTCAGGATGCAAGTGAGGCCCCGCCCCGGAAGTGCTGAGAGACTTCCGCCCACGAGGAATTCTCGGAGCTGGTTGCTTCTCTGGCTGCAGTAGGGTCCTTTGCTCTTGGACTGTTGTGTGGTGGGCACTGCTCAGGTGCAATCCCTTGGATTCCCTCTCCCTGGGCGGGCCGGGGTGGATCGTGGGCGTGAACCTCGAGAGGCGGGACGTATTGCAGAAAAGGGAGGCCCTCGCGAGGAATCTTACTGAATTGCAGACTGTCCAGTTACAAGAAAGCTGCCTGTCTGAATTTTTAGAAGAGCTGCTTTTGTTGGTTCCAAGGATTCTGTTACTAGAAAACTCTGCTCTGAGCTGGCTCCTGCAGCTCCTTTGACAATGACTGAGCCCAGTTCCTGACTCTTCTGCTGAGTAATACCAGAGATTCCTCTCACGAACCACTGAGAGGGAAGCCTCCAGGATCCTAGAGCGGACGACTTGATGTCTGGGGCGGGGTTCTGCGGAAGTCGACCTCTGGAGGCCACTGCAGGCATCAAAGGCCCCTTGGTTCGTCAAACCACGGTTTTCCGGATGGTAACTCCTGGCCTTAAACAAGGAGTCTGTTTCAAAGCAGAATTTTCCAGAAGTCTAACACAGAAGGAGATGTTCAGAAGATCAAATGGGAGCATCATCAGGGGCTCCACATTGGACAAGTTCATAAGCTTCTGAATAATTTACCCAAGTGAGGGAAGAGCCCGTTTGTGGACACACAATTTACTTTGCCTCAAACCAGGGAGAACAGTACTCAGATAAAAAGGCCTAAGAACACCTGGGAGAATTTACTCTGAATTTCAGTCCCTTGTGGCTCAGGTGGTAAAGAATCTGCCCACAATGTGGGAAATGGGTTCAATCCCTGGGTTGGGACAGTCCCCTGGAGAAGGGAAAGGCTACTGACTCCAGTATTGTGGCCTGGAGAATTCCACAGACTGTATAGTCAGAGTCAGACATGACTGAGTGACTTTAGCTTCACTCAGTCTTGTCAATGCTCCGGGTGTGGGAAATTCTCCGTTCAGCTTGTGTAGAGTTTCCAACTTCAACTGTAATAAAAGTAGCAGCCACTCATTGTAAAGGGAGTGGAAATCAGTCATTCAAAAATACCCCCTCCCTAATAAAATGAACCCTGGCACCCCAGCAGCCCTGACCAAGCACCAGCATGTCCAAAGTTAAAGAAAGCCTTATAGATCCTCAACTTGGAATGACCTTTGTGTAATCCAAGTCTCATTAAACAACAGAGAAGCCATCCTGAGAAGAGTTTGATGAGAATAAAGAATGTGGCAAAATTTTCAGACACTGGAATGATATTGTCAGACAAGAGAAACTTTAGGGATATCTTCAGTGTCAGAAGCCTTCTGTATGAGCTTGCTGCTGCTGCTGCTGCTAAATCATTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACAGCAGCCCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGATCAATGGAGTGGGTTGCCATTTCCTCCTCCAATGCATGAAAGTGAAAAGCGAAAGGGAAGTCGCTCAGTCGTGTCCGACTCTTAGCGACTCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGTCATTGCCTTCTCCGTATATGAGCTTATACCTCATTAAACGTAAGCAAATTCATTTTGGACAGGAGCCTTATTTGTGTCATGAGTGTGGCAAAGCCTTTAAGTTCTGTGATAGCCTTGCTAAACATCAGAGAATCCACAGTGAAGAGAAAACTTAGCGGTGTTCAAGAGTATATGGATTCATTGTGTTTTAAGTCTGGTCACTCACCAAAGAACCCACAGTGGAGAACACCATTATGAATATAGTGAGTGGGGGAATGCCTTCATTTGGAAGCCAGAATTTATTACCAGAAAACCCATCAATATTAAAATGTGAGAAGACCTTCACTTAAAAACTTTATCTTATACACTGGAAAATCCATACTGGAACAAAACCCTATGTATATCTTATATACATTATTTTGTATGGATATGTATATAACTGAATCACTGTGCTGTATACCTGAAACTAAATATGGCTTTGTAAATCAACTATAATAAAATAGATTTAAAAAAAAAAACAAAAACCTGGAGGACTTAACTTGTGGTCAATGGTTAGGATTCCACCCTTCCAACACAGTGGGCATGGGTTTGATCCCTGGCCCAGTAACTAAGACCCCACATGCCATGCAGTGCAGCCAAAAAGAAAAGAAAAGATACTGGCATCTGAAATATATAAAGAACTCCTAAAACTGAACAATAAGAAAATAATTCAGTTGTTTAAATGGGCAAAAGATCTGAACAGACACTTTACCAGAGAAGATACAC EMBV3_26376 TGGGAAAGATGAACTATCGGCTGATGATGTTACAGTCCTGCTCTGGACCAACCTGCCGCA Gene GeneID:512444|GNS:NM_001075562:1001_cdna UTR3_Alt 2 NULL GeneID:512444 5 GENE GNS G6S MGC137372 glucosamine (N-acetyl)-6-sulfatase EMBV3_03413 AAGAATTCCTCTTTGACTCTGACTGCAGAGGTCACAAAGGAGGGCTTCTGAAGAAATACA Variant GeneID:513228|C10H14orf179:NM_001040521:108_cdna 158^222 1 EMBV3_35879 GeneID:513228 10 GENE C10H14orf179 C14orf179 MGC133507 chromosome 14 open reading frame 179 ortholog EMBV3_16823 GCCTCCCAGTTTCCTGGTTTTGTCCCTGGCACTTATTCTGCCACAAGTGGGATGTAGCAT Gene BVV0102_068490 + 1 EMBV3_24288 GK000015.2:34791668-34848616 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061056 TCONS_00061055 TCONS_00061057 1 XLOC_036912 Coding TCONS_00061055 XLOC_036912 Coding Coding ZNF202 15:34846954-34851628 j TSS45544 2932 1 TCONS_00061055_4 275 4 0.373421784720736 1.22467849468878e-14 2.82198730010677e-10 1.42993751227006e-09 1.63943688755405e-05 8.96342245741258e-05 6.8151136456146e-18 3.35442952204557e-05 3.09135451631982e-64 1.10660345401804e-60 0 0 0 7.13106046384807e-06 2.88746161187664e-16 5.75683555194056e-12 0.000687316858197471 0 8.01005348956645e-10 3.83534426041391e-06 6.87223118508074e-63 0 0.000317817633506875 0.000104461681578844 0.000943438657297051 5.5560475013953e-05 6.699300261234e-05 5.96722730304071e-08 3.85629430554245e-05 7.5659157988886e-08 1.76937723692006e-10 XM_002693090.3 ZNF202 PREDICTED: Bos taurus zinc finger protein 202 (ZNF202), transcript 0.0 4711 100.00 0.890518417462483 NM_003455.2 ZNF202 Homo sapiens zinc finger protein 202 (ZNF202), mRNA. 0.0 1974 75.18 0.977148703956344 TCONS_00061055_4 sp|O95125|ZN202_HUMAN ZN202_HUMAN Zinc finger protein 202; 0.0 529 89.82 0.996363636363636 6 coding 0 0 0 0 -0.0185820164445021 0.891699990880417 -0.0114109752095856 0.804325515672591 ATGGCATTCAAGAAGAGCTCACCAGGGCTTGGTCGCTTTCAAGGATGTGGCCGTATGCTTCTCCCAGGACCAGTGGAGCGATCTGGATCCAACCCAGAAAGAGTTCTATGGGGAATACGTCTTGGAAGACGACTGTGGAATCGTGGTCTCCCTGTCCTTTCCAATCCCCAGACTAGACGAGATCTCCCATGTCAGAGAAGAAGAGCCTCTGGTCCCAGACGTCCCAGAGCCTCAGGAGCCTGAAGAGCCAGAAATTCTGAGTTTTACCTATACAGGAGACGGGAGTGACGACGAAGAAGAGTGTCCTGGGCAAGAAGATCTGAGTTTGGAGGATCCACACAGGTCTGTGTCAGGAGATACAGAAATTCACCAAACTCCAGACTGGGAAATAGTCTTTGAGGATGATCCCGGTAGACTTAATGAAAGAAGATTAGGCACAAAGATGTCTCAAGTCAGTAGTTCAACGAACCTTCAGGAAACCATGCCCGTCCACCTGCTGTTAGGGAGACATCATAACTGTCCTGTGTGTGGAAAGAGTTTCACTTGTAACTCCCACCTCATTCGACACCTGAGAACTCACACGGGAGAGAAGCCCTATAAATGCATGGAGTGTGGGAAGAGCTACACACGGAGCTCCCATCTCGCCAGGCACCAAAAGGTACACAGGACCAACGCTCCTCACAAATACCCGCTAAACCGGAGGAGTCTGGGTGAGGCCGCCCCTCTGGTCCAGGCGGAGAGAACCCCACCCGTGGAGAAGCCCTATAGGTGTGAGGACTGCGGGAAGCACTTCCGCTGGACTTCCGACCTCGTCAGGCACCAGAGGACGCACACGGGCGAGAAGCCCTTCTTCTGTACCATCTGTGGCAAAAGCTTCAGCCAGAAATCCGTGCTCACCACCCACCAAAGAATCCACCTCGGAGGCAAGCCCTACCTGTGCGGGGAATGCGGCGAGGACTTCAGCGACCACAGGAGGTACCTGGCCCACCGGAAGACACACGCGGCCGAGGAGCTGTACCTGTGCAGCGAGTGCGGGCGCTGCTTCAGCCACAGCGCCGCCTTCGCCAAGCACCTGCGGGGACACGCCTCAGTGAGGCCCTGCCGCTGCAGCGAGTGTGGGAAGAGCTTCAGCCGGAGGGACCACCTCATCAGGCACCAGCGGACACACACAGGCGAAAAGCCGTTCACGTGCCCCACATGCGGAAAGAGCTTCAGCAGAGGCTACCACTTAATCAGGCACCAGAGGACCCATTCACAAAAGGCCTCCTAGCCAGGGCCGCACGCAGGGACACCTGCCTTCAGCCCTCTCCTGGGGACAGACTGGGAGAGGCCCTCTTGTCGGCTAGAGGCGACCTCGTCTAGGGCATCTGCCTGACCTGCCCAAGTCTGATGACACCTTCCCGCAGCTAAATTAGCTCCTGGCAGGACCTCTCAGCCTTCCTCCACACCGTGAGGAGATGTTCTTCCCAAAGTTTGCCTGAAATGAGGCCTCTCCTTGGCTAAAATGCTCCCGCCTCCACCGGGCAGGTGTGAAGCAGGGGGAGTGAAGACACAAGAGGTTGGGCTTATTATACTTGCCCCCATCCTGAAGACAACAGTCTCAGCTTTGAAGTGGCCCAGGACCAATCCTCAGGGTTGGTGAGGGACCAGCCTTTACGATGCCGTCCTCCCTGGGCTCTAACATTAAAGCACACAGCCCTGAAGTCAGGGCAGGAGAACCGCGCCTGACCCCATAGATTACCTGTAAAAACCTCTCACTGGTTCACTTCCTCACCATGCACTTTCCTTTAACTCTGGGGAGAGGTGTGAGTAGCATTTGATGGGCAGAAACATGAAGGTGGCTTCATGTAGACCTCGTCAGGCTGCTCTCCTCTCCAAGGTTAAAATGACACCAGGTGCTAGACACTGCCTGAAAGGGGGGCCCAGGCAGCAGCCTCTTTCCTCGTGGGTTTCTCCTGTGAGAAGGCTTGTGCCTGGGCCTCCCAGTTTCCTGGTTTTGTCCCTGGCACTTATTCTGCCACAAGTGGGATGTAGCATTTGGGTACTGAGGGATTCAGTAAAGCCTGATTAAAATCATGGTGAAATCATTTACATTTCCACGTATATACAAGCCCACCCACCCTATCCTCATCACATGGGTTTGTGAGGGGATTTTTGAAATGGTATCAGCTGACAGAGGCACTCTTAACGATTGTAGAATCATGGTGGACGGGCTCACTTTATTTACATGAAGGAAACTGGAGAAGATCTAAGCTCAAATTACGGGAAAATTAAGAAAGAGCTGTTGCTGCTGACCAAGGCCATCCAGACTATTCTGACTCCCCACCCTCATCCTCCCTCCCTCACCCTCTGACATTAGGGAGACCTGGGACCCTGAAGAATTTACCAGGAGTAAATGGCTTTCATGTCTGCATTGTTGGCTTTTTCTTACATGATTTCATTTTCATGTAAGAACTAAAGCGTAGGATCTCATGGCCCAGGGGTCTCTGTTGTCTGGTAGAGGTTCTGTGGAGCTGAGGCTGAATAGTTATGAACCTCATCTGCTCTGACTGAGCATGGCCAGGACTGGGGAGACCATTCCCTCCGTCCATGGAGCACAGGGTATGGGATTAAAGCATGAAAAGGGAGACTGTCTTCTGTGCCTGGTTTCTTCTGCTCTGTTTATTGAGCTCTTGTGTGCCAGTGTTCACCCGGAGAGCATGGGTAGTGAGATGACAGAGCCTCAAGCTCAAGAGCTCAGCAAAGGGGATTCTCGTTCTAGTCAGTGATGGTGTTCCAGCTGACTGGCTTTAACTCCGGTTGACCGTTGTCCTCCTAGAAGCATGCACATATGAAATTTCTAAAAAGGAGCACTGACAGCCAAGATCCCTGGTTTCTAGGGCTTTCCACCCATACCAGTCTTCAGGACTTCATGTTCCCAAGACTTCTGAAG EMBV3_06182 CACCATGGGTGGGGAGAGGTGAAGTGTGTGCTCCGTTTTATTTCCCATTGTTTCTCACAT Gene BVT0102_219120 + 0 NULL GK000004.2:62475891-62529856 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181749 TCONS_00181744 TCONS_00181746 TCONS_00181751 TCONS_00181743 TCONS_00181748 TCONS_00181750 TCONS_00181747 TCONS_00181745 1 XLOC_110684 Coding TCONS_00181745 XLOC_110684 Coding Coding DPY19L1 4:62387991-62478010 = TSS135953 4667 1 TCONS_00181745_3 675 22 0.948399209047079 0.000142253977157889 0.000142016229968201 9.59655182290961e-05 9.38645613169944e-05 0.000268143371203507 1.44491451458566e-08 0.000153457503757775 1.62439868429257e-05 0.000142268197755501 2.93243466003447e-09 8.17626891382258e-06 1.58810470752706e-05 2.95367729475452e-05 1.00228318906525e-41 0.000159940888497921 0.00160124844353334 0.000892893787946084 0.000465299756992029 0.000442821992842348 0.000176031924745751 0.000158030101515266 0.000721824922923526 0.000612820697616714 0.00219161391522659 0.000390016502429828 0.000472727818789613 6.53851626057589e-05 4.71032583205413e-05 9.06927694878438e-07 0.000970046217867498 XM_616640.6 DPY19L1 PREDICTED: Bos taurus dpy-19-like 1 (C. elegans) (DPY19L1), mRNA. 0.0 3562 100.00 0.422969787872295 NM_015283.1 DPY19L1 Homo sapiens dpy-19-like 1 (C. elegans) (DPY19L1), mRNA. 0.0 4809 83.17 0.982644096850225 TCONS_00181745_3 sp|Q2PZI1|D19L1_HUMAN D19L1_HUMAN Protein dpy-19 homolog 1; 0.0 1283 96.60 0.957037037037037 1 noncoding 0 0 0 0 0.235047687156985 0.265211917369781 0.0423780353453593 0.418432308849262 ATGCGTCTGTCTGTCAAGCTATTTGTGTATGTCAATGTCCTGGCAGGAAACGGATTTAATAAGTGGCCTGTTTTCAGAACTGCCTTTGCAGCAGTGTTGCACTGGAGTCATATAACACACCTCTTTGAAAATGATCGTCATTTTTCTCACCTCTCAACATTGGAAAGAGAGATGGCTTTTCGCACTGAAATGGGACTGTATTATTCCTACTTTAAGACTATTGTGGAAGCACCCTCATTTTTGAATGGAGTATGGATGATTATGAATGATAAACTGACTGAATATCCCCTTGTTATTAATACATTAAAAAGGTTCAATCTTTACCCTGAGGTAATCTTAGCCAGCTGGTACAGGATTTATACCAAAATAATGGATTTGATTGGTATTCAAACCAAGATATGTTGGACAGTTACCAGAGGAGAAGGACTCAGCCCTATTGAAAGCTGTGAAGGATTGGGAGATCCTGCTTGCTTTTATGTTGCTGTAATTTTTATTTTAAATGGACTAATGATGGCATTGTTCTTCATATATGGCACATATTTAAGCGGCAGCCGTTTAGGAGGCTTGGTTACAGTGTTGTGCTTCTTTTTCAATCATGGAGAGTGTACCCGTGTGATGTGGACACCTCCTCTCCGTGAAAGCTTCTCATATCCATTCCTTGTACTTCAGATGTTGCTTGTGACTCACATTCTCAGGGCTACGAAACTTTACAGAGGAAGCCTGATTGCACTCTGCATTTCCAATGTATTTTTTATGCTTCCCTGGCAGTTTGCTCAGTTTGTACTTCTTACTCAGATTGCATCATTATTTGCACTCTATGTTGTGGGATACATTGACATAAGCAAGTTACGGAAGATCATTTATATACACATGATTTCTCTTGCACTTTGTTTTGTTTTGATGTTTGGAAACTCAATGTTACTAACTTCTTATTATGCTTCCTCTTTGGTAATTATTTGGGGTTTACTGGCAATGAAACCATATTTCCTGAAAATAAATGTATCTGAACTTAGTTTATGGGTTATCCAAGGATGTTTTTGGTTATTTGGAACTGTCATACTAAAGTATTTGACATCTAAAATCTTTGGTATTGCAGATGATGCTCATATTGGCAACTTATTAACATCAAAATTCTTCAGTTACAAGGATTTTGACACTTTATTGTATACATGTGCAGCAGAGTTTGACTTTATGGAGAAGGAGACTCCCTTGAGGTATACAAAGACATTATTGCTTCCAGTAGTTCTTGTTGTGTTTATTGTAATCATTAGAAAGGTTATTAGTGACATGTGGGTTGTCTTAACTAAACAGCAGACACATATAAGAAAACACCAGTTTGATCATGGAGAGCTGGTTTATCACGCATTGCAACTGCTAGCATATACAGTCCTTGGTGTTTTAATTATGAGACTAAAGCTCTTCTTGACACCACACATGTGTGTTATGGCTTCCTTGATCTGCTCAAGACAGCTATTTGGATGGCTCTTTTGCAAAGTGCATCCTGGTGCTGTTGTTTTTGCTGTGTTAGCAGCAATGTCAATACAAGGTTCTGCAAATTTACAAACCCAGTGGAATATTGTAGGGGAATTCAGCAATTTGCCACAAGAAGAACTTATAGAATGGATTAAATATAGTACTAAACCGGATGCAGTGTTTGCGGGTGCCATGCCCACAATGGCAAGTGTTAAACTCTCCGCACTTCGGCCCGTTGTGAATCATCCACATTATGAAGATGCGGGTTTAAGAGCCAGAACGAAAATAGTATATTCGATGTATAGTCGGAAAGCAGCTGAAGAAGTGAAGCGAGAACTGATAAAGTTACAAGTGAATTACTACATTCTGGAAGAATCGTGGTGTATAAGAAGATCCAAGCCTGGATGCAGTATGCCTGAAATCTGGGATGTGGAAGATCCTGCTAATGCTGGGAAACCTCCCTTATGCAACCTCTTAGTAAAGGAGTCCAAGCCTCACTTCACCACTGTATTCCAGAACAGTGTTTACAAAGTCTTAGAAGTCATAGAGGAGTGACTGCTGCCTACAGAGAATTCCACCAGTAATGGTTTCCATGTTTTGCTAATAACTCATGCCTTGTTTTTAATTCAGATTCCCAAAACTTTTGTAGGTAACTGTTTTCAAATAGAAAACGTCTTATTTGGTCAGTCTGAATGTAAAAATACTTAAACCTTTATCAGTTGGTTACTATATCAATGCACCCCTTAAAATTTGCTATGCAAATGAGTATATGCTTGTACTTGACTTAAATATTTGTCCTAAAGTGAGCAAAGCTACCTGTATAAAAAAATATGATGGGTCATAACAAGGTGATGTGAAAATATAGTCACTTCTGAACTGTGTAGGGGCTGATTTTACAGTTTGTGGACTATTGATGCCCCTTGCTTTTTTCTCTGCCTTTTGCTCTTGTCTTTCGAACATTTCAGTGATTACTGTAAGCTCCTCAGTCATGTCAGCCCCTGTCATCAATTTCAGAAAGAATAGCTGGGGCAGACATGGATATTTGCTGTGTAGACCTATAATTTATTTCCCTTCTTCACACTCTTTGTTCTCTGTTGCTCTTGTTAATAAAGCATTTCCTGCCCGTTGTAAATCCAAGTTCTTGGACCTAGTCTTTAGGACCAGATTCCTACAACTGCCAACCACGTGGCATTAGTATATGTTGGCTTGTCTGTTTCTTTCTCAATATTCTTTGTCAAATAAGTGCTATTTACTCATTTAATTGCTTATCAGTTACTTATTCTTGGTTTAAAAAGTTTAATGACAATTGCGTATTTTTCTCATTTTTAGTAGTATTCGAATGTTTATATTTTAATAACTTTAAACCACTTAAAAATTTTCATGTATAATTGTTTAAGAAAAGCTATTTTGAACAACCACAGATGCATCTAGCAACTAATGTATATGTGAGTAGATATAATTTATAGTGGAAGACTGTAGTGTATGGTAATTTTTCTTTTATTATTAAGATACCATAAATATGACTAGTTTTTTGGTCACACAGTAAATAAGTAATGATAAGTGAATGGAGTTTTTATATTTTACTTTTAAAATTGCCTGTCTTTAATAAGACGAAGCCTTAAACCTTATGTTATAATTTTGGTTTCAAAAACCATCACTTCAGTATGAGGAACTAATATATTCAGTCTTCCTCTTTACTTTTTTCTTATCTGTTTATTTGTATCTTGAAACTTTTCCAACCTGCTTTAAATTCCTAGTATGAATTTTTGCTTCTTAGAAGTTAATTTGTGTGAAATGAGATTCTACAAAACACTGAACCCTCATAGTTCTGAGAAATGGTTTTAAGATTTAACGTTCTAAGCAAACCATGACTCTGGCAGACTACACATTTAATTACACAGTGTTCTCTTTATTAACTGCAGGCAGATTAACCTCATTGTGGACTGTCCTTGAGACCTGAGTCCTCAGGGCTGGTTTCCGGTGCCTGCTCCAGGAAGCCACTGAAGAGCTGTTCTCTTTCTGCCTTCTCTCCAGAGCCCAAGGACAAGCCTGGTCTGGGGGAAGCACTAGCTTGCTTAGAACAGACAGCTGCCGAGACAGCCCAGGCTGAGGCACGTGCAGCCCCGAGCCTGCCCCAGAGCCCGTCTTTCCCAGGGAGCCTTTTTCTGGCCGAGATGGTCAGTGACTTCAGGTGCCTCTCCCTCTTTCTTGCTCACTGGGTGACTTATTTCTTGGTCTTGGTCTTTAGCCAGTTTTAGAAAACAAGGAAGCATCTGGGGAGTTTGGATTAGGAGTAGAATTTAAGCAGTGATGCAGCAACGCAGAAAAATGGGAAGTGGGCACTTGAGGCCTGGGAGGATGAAAGCCACCATGGGTGGGGAGAGGAGAAGTGTGTGCTCCGTTTTATTTCCCATTGTTTCTCACATAAATGTGTTTTGTACATCTAGCATTTACTATCTTTTTTAAATTTTACTTTTAAAGTCATTCTCTATTTTTCACACCTTTAAATAATTCCCTTCCCAGTAAGTTTACATGTAATTATTTGAAATTCCACATAGGAAAAACGTTAAAATGGTGTTATAACTGTTTTATATGCTGGGAAAAGATAAAACTAGTCAAATTAGGGGTTTTTTTTAATTATTATTTTTCAGAAGACTCCTTTCATAGCAGTATTTATTCATTTAGCTCCACCAGCAAGCTATGATTATGTTTTAGGCCAGTCAGTTTAGAAAAGACGCCCTGGGCTACACTGCACACTCGGCCTTGGTCACATCTGTAGCAGCCGGTGCTGAAGGTTATAAATATCTTTTATGGCAACACAGAGTAGTAGTAGGTTCGATATACATGATAAACAGTATTAGAGCTCAGTATTTTATGCATTTTTAGCATTTAAAAATATTTTTGCTTTAGTGTGAGGAAGGTTAGGATGGTCAAGGCAGTGATAAAAATAGCTATTGCTATGACATTAGGAAAGGAAAAAAAAAGTTGGGGCAGTATTCCTTAAAAAAGATAAGCCTCTTAAAATTGCTTAGCAGAAACAGTGTAGTGTTAAAATAGGACAATGATACTAAGGAGAAAATGAAAGAATGTATCAAGAGTAAATTGATAATGCATAGGGGAATTGTATTTTTATGAATTTTTTGCCAGTTGTTTACATGTACTATGTATGTTAAATAAAAAAGATCATGAAAAAT EMBV3_03958 GGATCCCTGCATTTGGCTCTGCCTGGTGGAAGAAGGTACTTGACTTCTCTGGGCTTCTTT Gene GeneID:514418|ZNF526:NM_001101997:214_cdna Constitutive 0 NULL GeneID:514418 18 GENE ZNF526 MGC159886 zinc finger protein 526 EMBV3_42684 TCCTTTGGGAAACTCGAGAGAAGTGCCTAAAGTGAGGTTGAGCTGGAGGAGTCTGGACCT Gene GeneID:790891|DNAH9:NM_001164418:135_cdna Constitutive 0 NULL GeneID:790891 19 GENE DNAH9 Bv2 dynein, axonemal, heavy chain 9 EMBV3_35211 CAGTTTTGCCCCAGGGATTTCTTGACAGTCCTCACTTATTCGGACCAAGTTTGTCACGGG Gene BVV0102_169451 + 0 NULL GK000007.2:22158442-22177132 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00250681 TCONS_00030963 TCONS_00220566 TCONS_00107436 TCONS_00207934 TCONS_00174805 TCONS_00023655 TCONS_00206300 TCONS_00171428 TCONS_00207933 TCONS_00174806 TCONS_00188145 TCONS_00091323 TCONS_00125692 TCONS_00250500 TCONS_00148960 TCONS_00250203 TCONS_00031886 TCONS_00133817 TCONS_00110425 TCONS_00123823 TCONS_00246739 TCONS_00137167 TCONS_00248945 TCONS_00174808 TCONS_00174809 TCONS_00000529 TCONS_00174807 TCONS_00132066 TCONS_00232829 26 XLOC_105290 XLOC_153624 XLOC_017212 XLOC_133883 XLOC_063346 XLOC_126448 XLOC_104695 XLOC_014322 XLOC_124877 XLOC_103815 XLOC_114188 XLOC_056098 XLOC_077234 XLOC_153443 XLOC_090838 XLOC_153146 XLOC_018131 XLOC_081223 XLOC_066329 XLOC_075375 XLOC_151107 XLOC_083377 XLOC_151888 XLOC_000141 XLOC_080699 XLOC_142312 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_35816 GCACAAGCTACAGTATATGAGCTAAAAAGAGAGAATATATGCTATGGTTGGCATTTAACC Gene GeneID:281187|MSTN:NM_001001525:6_cdna Constitutive 2 NULL GeneID:281187 2 GENE MSTN GDF8 myostatin EMBV3_42903 GTAAAGTTCAGCAGAAAAGGGGTATAGCTAGCCCTGTCAGTGGTGGATCAACAAGCCTGC Gene BVV0102_012649 + 0 NULL GK000016.2:29177235-29238151 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00072010 1 XLOC_043779 NonCoding TCONS_00072010 XLOC_043779 NonCoding NonCoding - 16:29229589-29233281 - TSS53854 3692 1 TCONS_00072010_5 108 0.0211267605633803 1 0 0.000176888887659336 0.000152414023319315 0.000215558732266721 0 3.20943263247561e-05 2.51905658312049e-05 6.16025518041475e-05 3.20406711466542e-05 0.000117539896339294 2.22887265807949e-06 1.24007705839077e-06 1.16219547895867e-05 4.08011622202887e-06 0.000104476923603417 8.90346146767466e-05 0.000457839173531154 0.000103427104426808 6.11641942448428e-05 5.63262982205112e-05 0.000196732127814416 2.46673369133942e-06 0.000110546169304295 7.20604354926516e-05 0.000553977163397448 0.000242083228656234 0.000106865174305972 0.000146002607747345 0.000137885457855948 7.88939451994526e-05 0.000192157857612526 XR_240749.1 LOC509946 PREDICTED: Bos taurus transmembrane 9 superfamily member 2-like (LOC509946), transcript variant X6, misc_RNA. 3e-27 129 92.39 0.0243770314192849 NM_018212.4 ENAH Homo sapiens enabled homolog (Drosophila) (ENAH), transcript 0.0 785 74.72 0.318255687973998 0 noncoding 0 0 0 0 0.357444638273494 0.120546610163977 0.0553728718714445 0.33786580188142 TTTGTCTTAAGTATTTCATCTTTTTATTTCAAAACAAGAGAGGATACCAAGAAGCAGAAGAGTGAAGCAGTTAAAACCAGCAAAGCTGCCAAGTAGGAAAGGGAAGTAGAAAGGGAGGAGTGGATCTGATTTCAATGACATGGTTGCTAAAAGCAAACACAGGGCTCCAACGCGGCAGACCTAAGTCACATTAAGTCCAAGGACTTCAGCAGGCTTGTTGATCCACCACTGACAGGGCTAGCTATACCCCTTTTCTGCTGAACTTTACACATTCTAGACACATGTCATGCACATACAGGTTACACTTTATGGTTACATGAAATTGCATGCAATTCACACAGAGAATCATTTTGAAGGCACTAGTGTGCAGCGGGAGCTGCGGCTTTCTGGCAAGTCCTTCCTAAGTTGTCTTGCAAGTGGTCCTCCTCTTTATTTATTCGTATTTAAAACTTTGGTGCAAAACCTAGGTGCCATCTAATCCCACCAACCCTGCTCACTCTTTTGGTTTCATGTCTCACCCTCTCTTCCACTTTCCCTTCTCAAAGACAGACGCCAAGCTTGGAAGGTAATGTTTTCCTGATGACAAGATCTCCTTTTATTTGGATTTACAAATAATTGGAGTCAAGCAGCAACTGACAATCCGTTGCTTGAAAACAAAGCTGCTACCAGTTTCTTTTATTCCTGACATTCAGTGAGGCCAGTAACTCAGAAATTCCATGAGATAAGATACATGAAGTTCTGTATGACATTAATTTCTAATACCAGCTACAACATGGCCTTGAGTATGTTTAAGTCAACTTTTAAAGAGTCGTTTCAGTCCATACTGCCCTAAGAGGTTCAATCCCAGATTATAAAGCCCCAGATCCATGGGCTGCAAACACTCACATCCTTAGCAAATAAAATAGCTCTGTATACTCTTTAAGGACATAAATGTACATTTCTAGTTTTAAAACTGTGTAGCGAAGCAAGATAACATGGCAGACTAAGCCATTTGGACCACAATTAATTCACCTTCAAATCCTACCAACTGGAGCTCTTCTACAAGATGCTGATGGACCAAGAACTCAAAAGGTATGAAAATGAAAACGTATTTAACATACTAAATCTTGTAATGGAAACAGTGTAGGTTGCTGTCCAACTGGAAAGGTTTCTTCCTGACTACCCCACTTCTCAAAAGATAAAAAGCACCAAAGAGACTTCCTGTCATTCACGCCTATGCTCAGTTCAACTCCCCAGAGGTCAGCAGAGAGCACAACGGAACTGATTTTTGTTCAGGTCAAGTAAAAGGTTTTGAAAACGCCTCCCATAGGTGGGGCGACGGAACTCTGTGCTGGAGCTTACCTGGGTTGACCTCTGCCTGCAGTCCCACTCCACCGATGCACAGATGCAGCTAGTCCCAACTCACCCACTCTCTCTACCCCAGCTACAGAGCGGAAACTTGCAATGTTGCTATAATTACAGACTGCTTCCTCATTCAGTCTTATCAAGCAAACCAAAAAAAGATGAAAATGTGTAAATACTGTAATTGAGTTTCGAATATTTTGCATCAACTGCAGATGTCTCAAGACAGAATCTTCTTTCTAGCTCAATCACTTTTCTTAGAAACACTTCATTCTCCACCCCACCCCACCCCCAAAACGCATACATTATGTAAAAGCGTATCTTACTGGGAACAAAAGGTGAATTTCAGAACACACAGATGCCCAACAAGAATAGAAGTAAAAGAAAGTCTGTATAACAGGACTCATCTTTTCTAATCCCAAACCTTCCCATTCATTCAACCTCTGACTTTAAGCCAACTGTCTTCTCAAGATCAAGCAGGGACTAAGAACCACCTCCACCCAAATGGCACAGGAGTCGCCTGGTTGGCCAAGGAATTGCTATCAGTCTTTTGGATTAAAAACAAGCTTCTCTACTTGTATATAATGAAAAGGGCAGAGAGGGGAGGGACCCATTCCTCCCAAGATGATAGTGACGGAAGGTAGCACACACAGCAGGCTCCGAGCAAACAAGAGCTGCTGGAGCACATTCCTCCCCTGGAAACAAAGCAGCGCTGCTTCGCACCATCACGCCATGCAGCTCTGCAGTGTTTCCTTAACAATAGCTACTAGGCCAGAAAGAGCGAAAAGGAACTTGTCACTAATGTATGTAACTGGAGCGTGGTCTCACATCTCACGTGATCCCAGTCACTCCTGGTCTGAGGGAATGGCTGGATGTGTGTGCTTCCTGGCTGAGGCCAAGGCCAGGAGAATAAAGACACCCGTAATCCCGTCTGTGAAAGCCCACGAGTGAGCAGTGGACCCTGGAGTAGCAGCTGCTGCTACTGCTGCTGCTGCTAAGTTGCTTCAGTCATGTCGACTCTGTGCAACCCCATAGACGGCAGCCCACCAAGCTCCCCCACCCCCAGCACTAACACAGCGCTACTGACCTCAAAGTGGTCATTTCATTGATTTTCCCTTATTGTTCACACCTAGGATGCATGAATTCCAGCAAATAGGATCAAAATTTTGAAACAATGAAAAGTGGATCTTAAGACCAGACAGTAAAACTCAGGCCCCTCTTGTTCTCTTAGATCAAAAAGGAAGCAAGCAAGCAAGCCAGTGGCTGTAGCACACACCGGATGATCACACGCAGAGCTGAGTGTTAGAGGCAGGCAGAGACATGGCCTCAGGGAGGACCTGGACCACCCTGCAGCCTGACAGCTGGTCAAGCCAACTGGAGCCCAGGCCGATGCCCGGTCCACTTCCCACACCAAGGGAGGAGTGAGACAGCAGAGCAGGAGGAAAACACACTGTCAAGTCTAAGAAAGGGGCGAAGGAGTGGATTAAAAAAAGAATCTCTCAACAATGTTTACTTTCCGAAACAAGGCTGTTTTATGTGAGGACCAAACACTACCCTCTACAGCTAAATTTCCGCAACTGAAACCTACAAAGACAAGTTGTCTATGGTAAGGAAACCAAATTGTGAATTACCCCTTGGCTCAGGCCTGAAATTCCCATCTCCTTGGAAATGAACAGAAAATGAAGCCAGATTTTAATACTAACAACACTCTATTTTCTGAATATCTAAACCTTCCCAATACTTGTCTCATGGGTTATGATTCTCCCTGGATATTTCAGTAACAAAGTCAGTGCCTACCACCGATGCTTCAAGGCACAGAACTCACTCAGGTCTACTGAGTTCATCACATCCAGCTCCCACTTGTCTGACCACTGGCACTGGACACAGCCTGGCGGTACCCGTGGTCACACGGGGCTTGGATGACAGTACTAAGCTGGTCCACCACTGAGAGCTAACCTCAGACTTGAGGGTATGAGGAGCATCTGCGAGAACTCTGAAACATTTTACACACCCGGTGCCACGGCAGGCAGCACAGATCAAGTTTAAACCCAAGCTTAACTTGGTTAATGACAATAAAAATTCCAAATGGGGACTTCTTACCTAAAATGAAACAAACTGAAAAATGTCTTTAAAAATGCCTTGCATTTTTAAAGAAAGGGACTCAGACTAAGGGTCCATGGATGTGACTAACAGCATGAAATATTAGTAGAAACTGTTAAGAATCACATCTTTAAAAGCCTCTGTGGCACATTTCTTTTGTATGGTTAAAAGAGCTTGCATTTTAAGTGTAAGCCAAGAATCAATCTTCTCAATTTCTACAGATTTGAAACTCTGGGACCTGATAATTAAAG TCONS_00068908 TCONS_00068907 TCONS_00068909 TCONS_00068910 TCONS_00068911 TCONS_00068912 TCONS_00068913 TCONS_00068914 TCONS_00068915 . 3' 1927 TCONS_00068908 TCONS_00068907 TCONS_00068909 TCONS_00068910 TCONS_00068911 TCONS_00068912 TCONS_00068913 TCONS_00068914 TCONS_00068915 . 3' 5618 EMBV3_06338 CCAGATTTCTGCAGTCTCTGGATAGTAGCTAAGAAACATATCTAGTTAACTATGAGGTGG Gene GeneID:519058|EDEM3:XM_002694246:208_cdna Constitutive 2 NULL GeneID:519058 16 GENE EDEM3 NULL ER degradation enhancer, mannosidase alpha-like 3 EMBV3_08851 CCAAGCTTCCTCCAATTCTTCTGCAGTGATTCAGCATCCAAAATGGTTGTAAGCAGTGAC Gene BVT0102_259295 + 0 NULL GK000022.2:32906213-33081563 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130839 1 XLOC_079545 NonCoding TCONS_00130839 XLOC_079545 NonCoding NonCoding - 22:32983796-32985796 - TSS97706 2000 4 TCONS_00130839_4 43 0.2015 1 0 0.000231296837455953 1.00484365320417e-05 9.25399422567204e-06 0.000166082826499492 2.71544300397548e-05 0.000173487231971068 8.74756144989255e-06 0.000443603218929443 5.91759996561268e-05 3.49731768235901e-05 0 0 0 0 7.35929821562438e-06 0 0 0 6.81237543484004e-05 0.000165402973469974 6.07146038208349e-06 0 0 0 6.58206140816784e-05 0.000119773059237235 4.10140609968055e-05 0 0 0 XM_005195700.1 LOC101903731 PREDICTED: Bos taurus uncharacterized LOC101903731 (LOC101903731), 3e-36 158 81.66 0.0835 NM_152445.2 FAM161B Homo sapiens family with sequence similarity 161, member B (FAM161B), mRNA. 4e-10 71.6 81.25 0.0375 0 noncoding TATGGACACATTGGGGGAATGAGAGGGTGGGATGAATTGAGAAAGTATCACTGAAACCTACATTACCACCTGTAAAACAGCGAGTCAGAAGTTTTTGTGCTGTATAACACAGGGTGTTCAACCTGGTGCTCTTTGACAACCTAGAGGGGTGGGTTGTGGTGAAAGGTTGCGGGGGAGGTTCAAGAGGGAGGGCATATATGTATGCTTGTGGCTGACTCATGTTGTTGTATATCAGAAACCAACAAAACATTGTATAGCAATGTCCTTCAATCAAAAATTAAAACACAACATCTAGGAAGCTTGAAGGAATGAAAGTAAATTAGATTTATTTTGTTTATTTAGTTTCTTTTTAATTTTCAAATATTCCATATCATTTTTATATTTAATTGTATAGTTAAGAATGTTAATATGGCACACAATAGATGCACTGCATTTTTGTTTTGAATTTTCAATAGCTTAATTTTTTTTTTTTAATGGTAAAAAGCTAGTGCAATTTCTTGTTGATAGAATGTTCAGGAGCATCCCTGACCCCTTTCTACTAGATGCCAGAGTACTCATTCCAGTTGTGACAACCAAAAATCCCACCATGTATCTCCTGGGGGCCATATCACGCCCAGATTAAAACCACTGTTCTGGACAGAGGCACAGCATAAGGAAAGATCGCTAGCACAATGCGTGGCACATAATGAACATTAAGCAAACACTGACGTCACTGCTTACAACCATTTTGGATGCTGAATCACCGCAGAAGAATTGGAGGAAGCTTGGATGTGAATATTTCAAGTGAAAATCGTTGTATGGTAGTTCTGCAAGCTTTCTTAGAAGGTTAGGTAATTATTTTCTCCTTTGGAATGGTTATCTGAGTACGGTTAAGAAAAAATATAATTTGATTTTGAGCATCTCAAGTGGATGTCTAGCCCTTAATTAAAACAAAAAAGTTGTGTTGTAATTTATCAGTGTTTTTCCTTTTAATCAGTGGGGAGTCAATAAATAAATCCATACACAAGACTTGAAAATGTATCCTCAGATGTGATCCACTTGTTATATTTGTGAGAATTCTAATTGATTGCCTGCCTATGGACACTTTTTTCTCCTCTTTTCCCTTTAAAAATTTAAAGCCACACACACTTTACCTAAGGAATCCACTTTGTCAAGAAAGCAAATAGAAAAGGTGAAGAAGAAAAAATCAGTGTCATAAACATCATTTTCACTTCATTCTTTAAACATACGGCCACTCCAACAGCTTCAAACACACATGAGTTTCCCTGGGAGCGGGGGCACCTGACAACTGAGGATGTGATGTGAGCTACAGGCAGGTGTGACTTGGCTCTCCTCCATCAGAGAACTAAATGAGGATTTGTATCCCCACAGAAGCTTGGTGGACACGGATCTCAGAGAGAACTCTGCCTTTAACGTCGGGTTCAAAATAATGAGTTGGAAACCTCAGTAAGACAGGTAAAATGAAAGAAACAGTAGGGAAGCTAGCCTGAGTTCTGCCCACATTATACCACAATGGGCAGTGACTCCTATAACATCAACAGCAGCCGTGTGTTAACAACGGCCACAAACAGTGCCTATTTCTCTTACAAGAGCTATTGCTAGCGCCATACACTTCCTCTCTACCACTGCTGAAACTACACAACCACAAGAGCTGTCACTACGGCACGGCCACCACAGCAACAGTTTCCATGATAACAATAACTGCTCCTCTGCAGTTGCTGCTACCTCCCACTACTGCTGGAAAAAAACAAACAAAAACAAACAAAAAACTATCCAGAAGTCACTATATACTATGGTCTTTAAATAATCCAATGAGTTAAATGTTGGAACTCTGTTTTCCAAAATGCAGTCTTAGCCTTTGACTACTTGTGCTCACAGAATGCTGTCACCAGGGATCCAGGGAGTCTGATGAAGGCGTGAACCTGGATCTCCAGATCTATGAGGTGCTGCTACACGCAGTGACTGGAGGACTTCGCCTTCCTGGAACCTGGTCATCTCAT TCONS_00128480 . 3' 493 TCONS_00128480 . 3' 2492 EMBV3_29208 GGGAAGCCAAAGGTGCTGGCCTGTGGACTACACTGCAAGTGAATCAAAGTTGCTCAGTCA Gene BVT0102_065199 + 0 NULL GK000019.2:39177344-39181603 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096757 1 XLOC_058049 Coding TCONS_00096757 XLOC_058049 Coding Coding PNPO 19:39179756-39188148 = TSS71824 3329 1 TCONS_00096757_3 261 0.219585461099429 7 0.604099630556549 1.22610563301719e-05 0 1.90166557888334e-11 2.10695031623484e-11 0 0 6.13126502456566e-06 0 2.13310993576395e-05 4.78590717047174e-05 7.35768392109654e-05 0.000119762485870139 9.98789926658673e-12 2.40213118514449e-05 1.26632491317958e-11 0.00442308428913908 0.00296943717816222 0.00311594949782068 0 2.16023876834035e-06 0 0.00157298353386461 0.00161803229237246 0.00295198209727836 2.49750557748777e-06 4.65605355787488e-05 2.28789278176128e-05 0.0004297943856035 0.000212144080361447 0.00109063271872402 NM_001014907.1 PNPO Bos taurus pyridoxamine 5'-phosphate oxidase (PNPO), mRNA. 0.0 2639 99.53 0.444878341844398 NM_018129.3 PNPO Homo sapiens pyridoxamine 5'-phosphate oxidase (PNPO), mRNA. 0.0 1317 79.31 0.442174827275458 TCONS_00096757_3 sp|Q5E9K3|PNPO_BOVIN PNPO_BOVIN Pyridoxine-5'-phosphate oxidase; 0.0 545 100.00 0.996168582375479 3 coding 0 0 0 0 -0.0908804037348255 0.457626110797077 0.0654048479889306 0.53957638051138 GCCTGGCTTGGTGACTGATAAATTCTTCCTTGCCGGGAGATTCCCCGGCTAAGATACTGGTTCCGAACGCAACGGAACCCAGCGCGGAGCCACGCCGAGTCACGTGGCCAGCGGCCTCATGATATTCTGGCTGCGGAGCGTCATCGTGACGTTTGGGCGACCTGCCGAGTGGCCCCGCTGCCTCCGCCACCTCTGCAGCCGCGGTGCTGCCATGGACCTGGGACCGATGCGCAAGACTTACCGCGGGGACCCAGAGGCATTTGAGGAGACTCATCTGACCTCCCTGGACCCTGTGAAGCAGTTTGCTGCCTGGTTCGAGGAGGCTGTTCAGTGTCCTGACATAATGGAAGCCAACGCCATGTGTCTGGCTACGTGTACAAGAGATGGAAAACCGTCTGCCCGCATGGTGCTGTTGAAGGGCTTTGGCAAGGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAGGGAAAAGAGCTGGACTCGAATCCCTTTGCTTCCCTTGTCTTCTACTGGGAGCCCCTGCACCGTCAGGTGCGTGTGGAAGGGCCCGTGAAGAAGCTGCCTGAGGAGGAGGCTGAATGCTACTTCCACTCCCGCCCCAAAAGCAGCCAGATTGGGGCTGTGGTCAGTCACCAGAGTTCCGTGATCCCGGATCGGGAGTATCTGAGAAAGAAAAATAAGGAACTGGAGCAACTCTACCAGGAACAGGAGGTGCCAAAGCCAAAATACTGGGGTGGCTACATCCTGTACCCACAGGTGATGGAGTTCTGGCAGGGCCAAACCAACCGCCTGCACGACCGGATCGTCTTTCGACGAGGCCTACTAACCGGAGACTCCCCTCTGGGGCCCATGACCCACCGAGGCGAGGAAGACTGGGTCTATGAGAGACTTGCGCCCTGACTCCCAATCTGTTGGCACTGAGTGGAGCTGGAGCCAGTGCCCCAGAGAGGGTATGGGATGTGGGGCCAGACCCTTCTAAACTCAACCCATTTCCCTTCCTGCCTCTTATATTCAGGGCCCTTCAGTGTTTACCCTTGGAATTCTCCGTAGTCAGCTAGTCTAGTGGAGTTTAACAGTGGCACAGACCATCACAAATGGAAAATCTCGTGATTATCTTCTCAACCTTAACTATGATTTATTGGACTAGCTCCCTGTAGGAGTGGGGCTGGTGTGACAGGGGGTGGGGCCCAGCAGTCTTGTCTGTTATCACATGACAAGAGTCTGACCAGAGCCCATTGGTCCCAGCAGAAGCACCCGAGGCAATCTAGCCAGTCGGTTTTTCTTTTCTTTCATATTTAAAATTTGGAATCTAGAGACTCAGAGCATAGGAGCTGTTATAGCCAAGTAAATAACGGTGGCCTAGAAACAGCAACTTCTGGCTGCTGCTCTTGCAATTCTCTGAACGATCCACGGATCCCTACTTCCCACACCTGGGGTTGTCCAATTCCTCCTTCTACCTCAGAAAACCCATTGTCTGTAAAAAAAAAAAGAGAGATTTATTTTTTCTTGGCTTAAACCAAGTCAGAATTGATGTGCTTATAACAAACCTTAACTAACTCATTTATTAATAGGATATTTTTAAACCTCTTACCCAACTGATAGCTGCCCTCCATTATCTGAAGAAGAGCAATATGGAAAAGAGACTAAATTTATTCTCTGTAGCTCTGAAGGACCCATAGGTGGAAGTTAGATGAAGTTAGATTTCATCTCAATATGGGAAGAAATTTCAAACAATTGGAGCTGCCTAAGAGGGAGTAGGTTAGTTAGTGAGTGTTCTTTCCCTGTCAGACAGGAGTTTTGTAGAAGGAACTCATGCTAATACCTGTGGGTCAGGAAGATTCTCATCAGGCCTTACTTTCCATATTTGTTTATCAAAACTCAATGTATGTGAGGGCTTTCCAGGCGGTACTAGTGGTAAAGAACCCACCTGCCAGTGCAGGAGGTGTAAGAGATGTAGGTTCAATCCCTGGATCTGGAAGAGCCCCTGGAGGAGGGCATGGCAACCCACTCTAGTATTCTTGCCTGGAGAATGCCATGGACGGAGGAGCCTGGTGGGCTACCGTCCATAGGGTCGCAAAGAGTCAGACACGACTAAAGTGACTTAGCACAGCACATATGTACGTGAAATACATATATACATACATTTATATGTATTTCACTTTCCAGATATAAAATTAAATAATAGAGCTTGTACTTTTCTGACACACATCCCTTTACCTCCCTTCCACCCCTACTGATGATGGCTCCTAGGTCACTGGTTTTCACTGGAATTACCCAGGAGCTTTAAAAACCCTGCTGCTCAGTCCCACTCTCAGAGGTGATTTGACCAGTGTGAGTGCAGCCTGGACTTGGGGACATTTCAAAGGTCCTTGGGAATTCTGTGTAGCCAAGGTTGAGAGCCCCTGTTAATAGATCCTTGCTACTTGCATTGGGCTTCTCTTTTTTTTTTTTTTGCATTGAGCTTCTCTTGTGGCTCAGGTGGTAAAGAATCCGTCTGCAATGCAGGAGACCTGGGCTTGATCCCTGGGTTGGGAAGATCCCTTGAAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATCCCATGGACTATATAGTCCATGGGGTCAAAAAGAGTCAGACATGACTGAGCGACTTTGATTCACTTGCAGTGTAGTCCACAGGCCAGCACCTTTGGCTTCCCTTGGGAGCCTACCCCAGACCCATTGAATCCCACACTGCTTTAAACAGGACCACCCCTGCTTCCAGGTAACCAGATTAGCCTCAACCTCTAAACCAACCACTTCTGCAGCTGGATTCTTCGGTAGCATTTGGCTGAGGCCTGTGCTGAGCTATAGTCTTCTTCGAGCACAAGTCTGGTGACCAGGGGTAACGTGGATGAGTGGCCTCCAGGCTGCGGAGAGGAGCCAGGCTGGGCAAATGTTTGCTGTGACTAAGCCAGGATCAGAGAACTGACTGTTTGCATACATTGGCCATTGAGCTTGCAACTCTGTAAACCGCTTCATTCCACTGTATGGGTGTGTGCTTTGGCATCTGTTACTGACTGCCTCCTCCAAGAGCGGCCCTCTGGGTGTTGACCACCCCCAACCCCCACGGGCTTCCTTAAGCCAGGGTGCAGGAAGGCACAGTGCTAGCCTTGTGGCCACTTGCAGGAGAGGGTGCTGGAGTGCCCTTCTCTACCTTGTCCTGTTATGTTATGGGGTCTGTGTATATCCCCTGCTTTGAGCCTGGTCTCAGCTGTTCCTTTCCTTTCCTCTGTCTGACAGTCCCTGTGCCAAGTCTAAAATAAAAGTTCATCAGCCATGCATGATGTAAATA EMBV3_30057 GAGAACTTCCTGTGCGAGATGGAGGCCATCCCATTCAACCCCGTCCAGTCCTGGCTGAAA Gene GeneID:282413|CACNA1I:XM_002687935:172_cdna Constitutive 0 NULL GeneID:282413 5 GENE CACNA1I CACNA1L calcium channel, voltage-dependent, T type, alpha 1I subunit EMBV3_15628 CCTAGTAGCTGGTAGCTCAGATGATAAAGAATCTGCCTGAAATACAGGAGACATAGGCTC Gene BVV0102_351929 + 0 NULL GK000023.2:28750909-28775568 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38365 CCCCTTTCCCCCTCCCCAATAAGACCATTTAAGTGTGTGTTAAGCAACTACAGAATACTA Gene GeneID:509591|RBMX:XM_002699591:89_cdna Constitutive 2 NULL GeneID:509591 X GENE RBMX NULL RNA binding motif protein, X-linked EMBV3_39596 CAGCCAACCCACGAAAGTCGAATCGGAGAACTGGTTGGAGTCCTGGTGAATCATTTCAAG Gene GeneID:522967|MYO1D:NM_001075838:256_cdna UTR3_Alt 2 NULL GeneID:522967 19 GENE MYO1D KIAA0727 MGC137743 myosin ID EMBV3_11213 CAAAAACTAAAAAGCCTGTGGAAAACGAAGTGATGAGGAAGAGGACAGAGTGTCTTTGCA Variant GeneID:504662|ZNHIT3:NM_001045895:203_cdna 317^359 2 EMBV3_21668 GeneID:504662 19 GENE ZNHIT3 MGC137225 zinc finger, HIT type 3 EMBV3_04234 GTCCTAGAAATAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATA Gene GeneID:768310|FUSIP1:NM_001078126:305_cdna UTR3_Alt 4 NULL GeneID:768310 2 GENE FUSIP1 MGC128430 FUS interacting protein (serine/arginine-rich) 1 EMBV3_30321 CCAAGCAGAATGAACGCAAAGAGCTTCAGGTGTGGCCCAGGCCTACATGAACCAGAGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25343 GGTGCAACAACTCGAAGAAAAATGCCCAGTCTGGGATGGCTCAGGAAATGCTATCAACAA Gene GeneID:516077|BNIP2:XM_002690851:196_cdna UTR3_Alt 2 NULL GeneID:516077 10 GENE BNIP2 NULL BCL2/adenovirus E1B 19kDa interacting protein 2 EMBV3_13536 GTACCTAGCTCTAGCCTGTACCAGTTCATCACAGGAAACCAACCTGGGGCTAACTACAAC Gene GeneID:786852|CIT:XM_002694582:652_cdna Constitutive 0 NULL GeneID:786852 17 GENE CIT NULL citron (rho-interacting, serine/threonine kinase 21) EMBV3_40971 TAGCCTACATGTGCTGTATATGAGCTCCACCCAAGGGACAGATTCACAGGGGTCCCAAGA Gene GeneID:785655|ERBB3:NM_001103105:94_cdna Constitutive 0 NULL GeneID:785655 5 GENE ERBB3 MGC143211 v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) EMBV3_26470 CCAGGAAGTAGTATAGAACCAAATAGAGCTGTGTTCTTGTGTCCTGCCGTAGTTCCAACG Gene BVV0102_029678 + 0 NULL GK000011.2:5424566-5434488 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026765 TCONS_00026766 TCONS_00026774 TCONS_00026771 TCONS_00026767 TCONS_00026770 TCONS_00026776 TCONS_00026775 TCONS_00026768 TCONS_00026772 TCONS_00026773 TCONS_00026769 TCONS_00026777 1 XLOC_015104 Coding TCONS_00026769 XLOC_015104 Coding Coding LONRF2 11:5429164-5460002 j TSS19134 6731 1 TCONS_00026769_5 140 0.162680136681028 9 0.782015111716445 0.000807400363052208 0.000428358503727434 0.000392460506563699 1.51219260150333e-06 0.000701001763747308 0.000384998530115443 0.000435791487372836 0.000715508034565526 0.000681122538307079 0.000153926472938417 1.44020954227339e-07 1.18377366721018e-09 0.000131272506171397 6.97296014527749e-05 0.00012989232296951 0.000803911948579356 1.24971919731136e-08 1.14767305604167e-14 0.000692279133668775 1.06319489384608e-10 0.000305263757727261 1.45609277511557e-09 1.29305037068156e-05 1.10625249239965e-09 0.000313537523660889 0.000486787181733387 0.000490616161751884 1.47922700087898e-05 3.76970897952114e-63 3.40018800905914e-16 XM_003586612.2 LONRF2 PREDICTED: Bos taurus LON peptidase N-terminal domain and ring finger 2 (LONRF2), mRNA. 0.0 4271 99.92 0.352696478977864 NM_198461.3 LONRF2 Homo sapiens LON peptidase N-terminal domain and ring finger 2 (LONRF2), mRNA. 0.0 1139 70.72 0.343633932550884 TCONS_00026769_5 sp|Q1L5Z9|LONF2_HUMAN LONF2_HUMAN LON peptidase N-terminal domain and RING finger protein 2; 5e-42 150 76.47 0.6 0 coding 1 0 1 0 -0.712272220423111 0.020934063691252 -0.0586316140181637 0.468722235410789 GAGCTGGGACTAGCCCTGAGCACTCACCAGCAGAGATCCTTTGGAGCCTCAATTATGTATTGATCATTATTAATAGATAATCCACAACATGTGGTCCTCAAACAATGCAGAGGTGATGGAACTCAATAGAATGGTCTTGAAGCTCCTGGTGATAATTCATTATTGCTGCTCTGAGCAGAGTTGTATTTATCCATGAAGAACTATGAACAGGCTCTGCAGGTTGCTGGTGAAGTTTGTCAGAATGAATCTCTCTTGTCTAAGGGGCATCGTGTGAAAGCCGAGGCTCTCTCTGGACTGGGAAGAAGTAAGGAGACGTTGAGGGAGTTTCTCTACTGCCTTGCTCTAAATCTTGAATGTAACTCAGTGAAGAAAGAAGCCCAGAAGGTACTGTGTGAGGTGTTTTTCCCTGCTTCAGAAAACATGCCTTAGAATTTAACCTCTTCCACCCAAAGTATACTGTTGAACATGAGATTAAAGGCTCAATTTCAGAGCCATATGAACAGCCAGGGTCCTGTGGAGGAAGGTGGCAGTGCAGGAAGGTCTAAGAATCCATCTGAGAAACCTGATGTGTTTAGAAATAACAGTTCCTCAGTTTTACATTTCATACTGAGCTTACACTGTGAAGAGGATCAGGAGGTGTTAGACGGCATCCTTCCAATGGAGCCCAGCACTGGTTTAAAGAGACAGTTTCCGAATGACTCAGAGGATGCACACGATGTGAATGCCCCTGGAAAAATTCCCAAGAAAGTCTGACCAGAGATGTGCCCATCTTTGTGTGCGCCATGGCCTTCCCCACCGTGCCCTGCCCACTCCACGTCTTTGAGCCCTGCTATTGGCTTATGATACGAAGATGCCTGGAAATGGGCACCAGACGGAGTGGCATGTGTTTATCTGCTGAGCACGCAGGGATCCCGGAGTACGACTGCACGCTGGCAGTCAAGGACATCAGGACATTCTCCTACGGCGGCTCCATCATTGATGCTATAGGGATCAGCCGCTTCTGGGTTTTGAGCCACCATCACAGAGATGGCTACAACAGGCAGACATTGAATACTTGGAAGATGAAAGGGTGGAAGGCCCAGAGTGCGAGGAACTCTGTGTGCTGTAGTTTATCAGCAGTCTGTGTCCTGGTTTGTGTCACTTCAGGATCCCACAAAAGAGCAGATTTTAAGCCATTTTGGATCGATGCCAGACAGAGAACCTGAGCCTCAGAGTAACCCTAGTGGTCCTGCATGGTCCTGGTGGATGCTGGCGGTGTTGCCATTGGCACAGAAGGCTCAACTGGCCACACTGGGCATGATCTCGCTGAAAGAGCGCCTGCTTGCCATTGCGCGGATATTAGTCATCATCACGCGTAAGATGAATAGTCGGCAAGAGCTCATTAATAGCAAGGAGAGAAATAGTTGATTTCTGTCGACGCTTCTGGAAGGCCTTGAGTTTTTATGAGGCGTGCCAGGGACGGACGAGTTAACATCCATCCATCATGCTTTGTAAAATGCTTGTTGATAGGGTTCCAGAATGGAACACTTGGCAGATGTTGTCTCCTACTCAGAAGTTAAGTCTGTTCTAGATGGAATCTGACTCCGTACAAGGTCAGCCTGAAATCTGAATGGATCCCATGGTTGGAAAACAACCTAAAAAAATCTCTCTGGAACAGATGCTTCCAGTGCTCAGTACACTGAAGGTGATTGACGAGTGGTTTAGGTTTTGCCAGAAAGAAGATTGCCTTCCCAGTGAAGTGTCTTGCTCCTCCAGATGGGAACAGCTTGCTTGCGTGGGTGGGTAGTAAGAAGGAAACTGTCTTGTTAATCTGGAAGCATATTTCTCAGAGTCCGGGCTAGCTGAAAACATGCTTATTAGGCTTTGTGTGTCACTGTGAAATGGAGGAATCAAACCGTTGTCCAGTGTGGGGGGTGAAGTTAGTCCTTATCCAGGAAGTAGTATAGAACCAAATAGAGCTGTGTTCTTGTGTCCTGCCGTAGTTCCAACGTGGTAAATTGCACATTTTAACTAAATGAATATCAGAATATAAGAAGGTGTACCTTGGATGTAGAAAAACCTGAAAACAGTGTAGCTGATTTGAGGATATGTATTTGTGCGTGCACACACACCCACCTGCACACCCACACAGCACAGGGGAATAAAGGGAGCTAGAATTCCACCCATATTGGGATGTTAAGAATACAACCAAAATAGTGCAGAGACCCCTTGGAAACACAATGTCTTATTAATCCAGTGGGTGTGAAGCATTTAGAAAATGTTGTGTTTCTACTCAGATTGGCGTTAGATGTTAGACCCATCAGTAAATTTGAGCTCACTGTCCATCCACTGAAAGACGTTAAAAAGCTGCTATGAATTCGGTATCTGTTTATCCCAAAAAAGCACACCAGGACAATATACAAAGAGAGGGAGGTGGGTATGGGATGTAAATATTTAGCAAGTTTTTTTTTTTTCCAAACCCAGCCTAAAATTTTTTTTTTTTAAGTTTTACTATGATCAGACTAGTTGTTATCTATTCAAATACCGTGTATAACTTCCAACCCCCTGGTGCATATTGATGATGTTAGTTGGAATAACCATTTGAACACATTGTGCTGACTCATTGTCACTGGCCCGACAGCTGGTATGTTTAGGTGGCTTCTTGGTCTGTGAGGTGGATGTTTTTAATGAAGAGATGATGAAAACCACACTAGAGAGTTATCACAGCTTTGAGTTTTGCTTTATTATTCATTCAAGATATGTGATTTTTGAGTTTTAAAATATGCGGTTAATGATGACCAGTGGTGATTGGTTCATCAGTCCATCAAGCATTTTTATTAGAAAGACTTCGTAGTCATATTTGTTTTTAGTTGTAGGAGGTTTCAGTGGCTAAAACTCAGTTTCATTATGGAGTGAGCAAATACTTAACTTAATCACAAAGAGAAAATTTGAAGGTATTTTCCAATCCCTGTTTCCAGTGCCTTACATACTTTGTATCTCAAATCTCATCTTAAACATGGTTTAAAGGCAATTTGGCCAAGTGATTTCTAAAATCTGTTATTGATTCATGCGTTGACCATGTGTGTGCCCAATCTCTCAGTCATGTCTGACTCTTTGCAATGCGATGGACTGTATGTAGCCCGCCAGGCTCCTCTGTCCAGGGAATTTTCTAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCCCCAGGGGATCTTGCCGCCCCAGGCATCTCCTGCACTGGCACGTGAATTCTTGACCACTAGCACCCCCTGGGCAGCCCCTGCACTGACGGTAGTGGTCACCATTTTCAGGCATTACAGCCTAAGCTGATCACCTGAAAGAAAGCAGAACTGCGGTATACCAGAAACCTCTGTTAGAAGCAGTTCTTGACCGTGGGTGTACCTTGACTGTGGTCTTTCTCTTCTTGAAAATCCTTTTCTACCTTAAAGCCTTATCATTGCTGTTCTGTGTGGGGGTGTCCAGATAACCACAGGGTGATCCTGCTTTCTCCAGGAGATGTCTTGAAGTTAAGTTTCTGTGCTCAGAGTATAGAGTTTTCTCGTACCAGTTGGATGCTATTGCTTTCTCAGCCTCACTCTTGAAATGTTGTAACTCGCACAGTTCTTTAACCAGAATCATTGTTAACGTCTTCCTCATTTGGTCTGCCCCTTTCTGAGCCGTATTGTCATTCTGAGTGTTCTCGTATAAAAGCCTGGTCAGCAGTGATGATGCAGCCCAGAGCAGCAGAAATTTTTTCCTTTATTTTTAACTTTGAACTTTTAATTTTGTATTGGGATAGAGCAGATTAACAATGTTGTGATAGTTTCAGGTGAAAATTGAAGGGGCTCAGCCAGACATGTACATGTATCCGTTCTCCCCCAAACCCTGCTCCATCCAGGCTGGTACATAACATTGAGCAGAATTCCCCACAGTAGGTCTTTGTTGGTTATCCATTTTAAATATAGCAGTGTGTCCATGTCCATCCCCAACTCCCTAATTACCCATTCTCCTGCCAAACATAAGTTCATTTTCTAAGTCAAAAGCTTTTTTTTTTTTTATTGTTTTTTGACACCAAAGGGAATGGACTGCAGTCACTTCATGCTCTGTGTAGCCTCACACCTCCACATCATTCAAAACAGAAGGAGGTGGGTGCTTCCTGAGCACTTGGAGTACATTATTTATCATGAAGCCGAATGAAAGAAACAATATCCCAAGTCGTATTAGGAAGAAAGCTTCCTCTTACAAACTTCAAGGAATCCCAATTCTGGTTTGCTACAAGTCTAGTTAAAACAGAGCGGTTCATATGCCTCCCTGTTCCTCCTTCCTCTTTTTTTTTTTTTTTTTACTATGATAGAGATGTTATGTCTAAGGATATCTCAGAAAATAATGTGATTCCTTGTTCAAAGTCAGAGCATTCCAGTTTAACTTCACTGAAAACTTTCTGGTCCTAATGCTCTAGTTACATCAGAATAAAAACAGAATCTGCTTAGAGTGATAAAAGTTTGGGGGTTAATTTTTCTTCCTTAAATTTAACACTGGAAGCACAGTACACTCTGTTAGATATTTTTCCAGTCACTCTTCTGAGTGACTTGATTCATAATTCCATCCCTGCCTGTGTCTTTGAAATGCAGCTGATACCCTGACAGTATTCTGAAAGTCCAGGCGATTTTGCTGGGGTCGGGGGTGGGTTATCTTGTTCCCTGTGTATCCCTGTCATCTGAACTGAAAGAATATTTTTTTAAAGTTCCAAATTAAAAAAAAAATTTAAAGTTTCAAGGTTTATCCATGCAACCACCATAGGTTCTAACCAGTTCACATGCCGAATTTTGAAGGGTGATCCCATTTTATCTATAAGGATCACATCCTTATAATCAAAGAGATGTCTTTGTTTAAACTGCTTCTCTCACCCAAACCAAGAAAACGCCAAGAAAACATTTAGTAAGTTGTAACTCAACTCTTAACATATGTCAAGTCTTAGGACAAGGCTTTTCAGTCATCAAAGAACGAATTTATAGATGGTAAAATTGCTGTGAACCATGATATTACCATTTTGTCATAAAATTATTTGAAAGTTGGCCATTGATACAATGAAAATACTCCATTGCCTGACCTAGCTGTATTACATAAAGTCATTTGGATCTATGACCTGCTTTTTAAAAAATATTCATTTGTTTCTTCTCCTTCTTGTCTTTCTTTATATTTTCTCCCACCACTTAAATTACTGTTTAAAATTTAGATGCTGTCTTTGAAATAATAAAGAAATCTAAAAAATATGGAGAAGAATGAACATGGTTCATTAGGAGGAAAATCAATGAGGGTGGTTTCTTTCTGTGTGAAGCGCAGGTTTCATTTTACGCAGCTGTGCCTGGAGTCAGCTAGGGAGGTTTCCCTTCTCCCATTTTAACGTGGGTAGCAGTGGCAGCTTGCAGGAAGAAGCTCTCAGTGCTTAGCACACCATCCGTCCTGAAAGGCCCTGTTCTGATTCTGTGGTTCATCAGCACCTAATTCCCAAGGAAAGTGTGAGTCGCTCAGTCGTGTCCAACTCTTTGCGACCCCATGGATGGTAGCCTGCCAGGCTTCTCTGTCCATGGAATTCTCCAGGCAAGGATACTGGAGTGGGCTGCCATTCTCTTCTACAGGGGCTCTTCCCGACGTAGGGATTGAACCCATGTCTCCTGCGTTGGCAGGTGGATTCTTTATCATCTGAGCCAGATTTGAATGGTAGGGACATCTGTACCAGCCACACAGGTGAGATTGAACCCTGAATGTTGCCAGATATCACCTCCTCTCCACTAGGCCTAAATGCCTAATTCTAAGCCATTGACTTCTGTGTCCTCGAAGAAGGTCCTTTTACCGTTACAGTTCCTTACCTGGACTTTTACTGCTCAACTTAGTGCTGGAGAAAAAAAAAAAAAAAACAAGTACCAAAATCTGCTGAATCCTATAAAGTAGCTTTTAGTAGTGAATCTTAAGTATGTATCAAAAAGACAATACTTTGGCCACCAGATGCCAAGAGCCAACTCATTAGAAAAGAGCCTGATGTTGGGAAAGGTTGAGGGCAGGAGGAGAAGGGGGAGACAGAGGACGAGATGGTTGGATGGCACCACTGACTCAATGGACGTGGGTTTGAACAAGCTCCAGGAGATGGTAAAAGACAGGGAAGTCTGGCATGCTGCAGCCCATGGGGTCGCAAGCAGTCAGACACAACTAAGCAACTGAACAACAGAAATTGCCTATTAGAATATTAGGATATTTCAGCAGAATAAAATAATGAAATGAAAGTGCTGCCATTGTACTTGGCCATGTTGGGAGCAGTAGCTCTGATTTGTGCCTGGGTCTTAATTTGTAACAGTGACTGAGTGACAACACAGAGAGGGTCAGTGCCATTGAAAGAAAACTTCATTGTTACTCACAGTTTTGCTGGAAATGAGAGATACTCTGCCCTGGGGAAACAGCAGAGTCAAGGAGGCAGACACAGGAGTGAAGGGAAAGCATGGGGCAGGGCCTTCATTGTACTGGTGTTTCTGCAGGCAAGGCCAGGCAGGGCAGGGGAAGCAACTTGGTGATGTCCATGTGTAGAGTCTTCTCTTGTGTTGTTGGAAGAGGGTGTTTGCTATGACCAGTGCCTTCTCTTGGCAAAACTCTATTAGCCTTTGCCCTGCTTCATTCTGTACTCCAAGGCCAAATTTGCCTGTTACTCCAGGTGTTTCTTGACTTCCTACTCTTGCATTCCAGTCCCCTATAATGA EMBV3_29345 AGAGGTGGCGTCCCAGTGGCCCAGTGCTGGAAAATAAGACAAGGTCCAGTTAAAGTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09944 TGGGGATATGTGAAGGCAAAGAATCCTACACCAAGACAGTTACTGCTACCCTGGGGAGTC Gene GeneID:617543|REEP5:NM_001046605:57_cdna UTR3_Alt 2 NULL GeneID:617543 10 GENE REEP5 MGC137184 receptor accessory protein 5 EMBV3_12066 CCCAACTGCTCCGGTTACAACGGTCACTGCCTATTGCCTTCTCCTGCCTCAAGTTTTCAT Gene GeneID:617978|LOC617978:XM_002693151:70_cdna Constitutive 0 NULL GeneID:617978 15 GENE LOC617978 NULL hypothetical LOC617978 EMBV3_16836 TGAGGCTCTATGGCTTCACAGTCTCCAACATTCCAGAGAAGATCATCCAGGCCTCCCTGA Gene GeneID:618305|LOC618305:XM_002692547:172_cdna Constitutive 0 NULL GeneID:618305 14 GENE LOC618305 NULL similar to Speriolin (Spermatogenesis and centriole-associated protein 1) (Spermatogenesis-associated protein 15) (Spermatogenic cell-specific Cdc20-binding protein) EMBV3_08258 TCAGCCTAATCCACTGACTAATGCTAGATGAGGGGCAATACTATATGATGACCACATCTG Gene BVV0102_292343 + 0 NULL GK000001.2:133655033-134035255 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41131 AAGAAGCTCTTTGACTACTTCAACCAGGAGGTTTTCCGGGACGACAACGGCACTGCGCTA Gene GeneID:615232|INPP5A:XM_002698602:32_cdna Constitutive 0 NULL GeneID:615232 26 GENE INPP5A NULL inositol polyphosphate-5-phosphatase, 40kDa EMBV3_14409 GCTTCAAAAAACAGAACATGGGGTTCAGACAGACGGAGGCTGGAGATACTGCTCCTTAGC Gene BVT0102_163564 - 1 EMBV3_43754 GK000018.2:62679861-62683727 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32926 CTGGTTTTTTGGTAATTGTGTTTATACTTTTCATCAACATGAAATAGGAGAGAATCATGG Gene GeneID:519943|LOC519943:XM_002692949:41_cdna Constitutive 2 NULL GeneID:519943 15 GENE LOC519943 NULL similar to CG4452 CG4452-PA EMBV3_29154 ACAGCATACAGAACATATATCATCACAGCACATCAATCCATACCAATTAATATCAGCCAC Gene BVT0101_011490 - 1 EMBV3_07211 GK000030.2:15540836-15811929 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206254 TCONS_00057018 TCONS_00009371 TCONS_00058128 TCONS_00206255 4 XLOC_124865 XLOC_034820 XLOC_004927 XLOC_035925 Coding TCONS_00058128 XLOC_035925 Coding Coding - 14:82094015-82099878 - TSS43805 5863 6 TCONS_00058128_1 65 0.844618795838308 1 0 0 1.42822748366776e-07 0 2.26982300237977e-07 1.64909315741234e-06 5.01643347238605e-07 3.72998741831484e-07 2.45759859409671e-06 3.47966094467518e-06 0.000107045530380264 4.7061861663878e-05 3.38377227786038e-05 1.62262430322906e-05 9.22541666462247e-05 3.73875052193381e-05 0.0023618740805083 0.00205303858559483 0.00606208114821067 5.28149909105646e-07 2.2487391664253e-06 7.68131334997797e-08 0.00162059026821142 0.00170753933579914 0.00208593180334666 1.18172881090719e-06 1.1807456501134e-06 8.03475725376602e-07 0.000480588386363405 0.000383517105637161 0.000551319458979418 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 1058 85.03 0.154187276138496 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 1e-09 71.6 70.59 0.0283131502643698 0 coding 1 1 1 1 -0.595416926795943 0.174418025970049 -0.0383345061947562 0.593236167095668 CAGCCCCGGTGGATCCAGGGAATTCGAAGCGGGGACGGCGTCGGCGAGGATCAGGAAACAATTGCTTAATTAAACGTTAATTAAGGATATAAAGAGTAATAGAATGAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTAAGAGAAAGAACGACATGGTGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAGTAGTTTTTATACCTTAAGTTATGCATAGAGGATAATGGGGGAAGGGGTAGAGTCATGCAGCAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGTTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTTTTTCTCTAAAGGTGATTATTCTCAAGTCAGGCGCCAGCCTCCAAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAACTATATTAATCAATACACTGCCAGGGACACAGCAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTTTAACTGCTCAAAGGAATCTGTATTTAGACAGTTTAGAACATCTCATGCCTCTCACAGTTTGGAGGCTCTGAGCAATCACATGTGGCCGGAAAAAACCTATTCAGGCAGGCTAGAGGACTTCCAAGGGAGTTTGTAGGTTGAAACACTGTCACACCCAGGAATTATTAACTGGAGCTATAAGCTAACTCTTTTTTCAGAGAGGTAGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAAAGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATTGCTCGAGAATTTCCAGGGAGACTCCTGAGGCTTGATCCCGCCTTTGCGTATGCCAAGCCTCCTTCCTCATGACCTTTGCCAGAGGCGGAGCTCGCTCCCCGCATCTCCCCCTTTTTTATTTCTTAAAACAGCCAGAGGCAGCTCAGTCGCGAGCTTTTGAATGCTCTGCCGAAGAATCCTGACAATACAAGGAAGAATGATTATGAGAAGCAAAATTAGAACTAAAGATATTAGACAGAATGCTTTTTCCAGAAGTAAAGTTAGAGAAGGTGTGAAATAAGTCATTAGCTGCTCCAGCGGTGGTAAAATCCAGTTGACAGTGTTCCAGGGTCTGTATTTGATTATGAAATTTCCCTAAGTCCAGGCCAATGTCAGAGCTGTTGCAAACACCTGAGATATGTTTTTTGATTTTTTCCCATTCATAATCTGTCTCGTTTACCTTTAAAGATGTCACGCATATCCACCGGTAATCAGCGTGGCAAGACAGAGCCATTTTCACTTTTAAAGCCTGTAACTCAGTCCCAATATGCATTATTGCCTCTTTTAAGGTGTCTACTCTCATCTCTAATTTCTTATCTATAGCTTCCTGTGTTGCTAGAGTTAAAGAAACACTTTTAGACGTGGTATCAACATATTGGGCAGTATGCACTTGTTGAGTCAATGATATTGCTGCCGCAGTAACAGAACTAATTGCTGCTATTAAAGCTGATATTCCTAAAATAAGTAAAGCCCACAAATCGTCGCGATCACATTAAATCTTGTAGTTGTTGTAACACAGCAAGACTATAGTTATATCAATAAGTGGTTACATCGTAAGATATGGTGGACATTGTAACACTACCAAAGAGCAAACATTATATTGAGGGTTTAAACAAGATGAGAGCATGCATTGTTCACAAGTCACTACATTGGGTCCACCAGTGAAAGTCACATGTACATTAAGTTTTCCAGAATCATTGGTAAAGAGAAAAACATAAGGAAAGGGTAGACAAGCCAAAACAGAATAAAGTAGAATTATTTTCTGGTTGGAGTTCGCACTGCAGCAGCCCCGTCAGTCTTGCCGGGATCTCGATGTTTATCTTGCCTCCCCTTCCGGCAGGCTCCTCTTTTGTGATCGAAGCAATGGGGAACTGGATGTCTGGGGGTCTGCAACATGGCGAATCAACCTGTCTTGGATCTAAATTGGAGAATCTGCATCCTGTGGAAAAATACAAGCACATCCTCGACCGCTAGTTAATAAGGGGTCAGGACCCTTCCATTGTCCTGAGAGAAGGTCCTTCCATTTGACTAACGGTTTTGCATTTAATTGCTCCAGGCACCAATGACAAAGCATTGCAGTAGTTCCAGCCAGATCAGTATTTAGAATATTTGTTACGAAAAGAGCAAATATTTATTACGAAAAGAGCATGTTGCAAGATTTGATGGGGACAGCTATACTTAAACTCCCCTTCTTTTAGTTTTTGAATTTGGATTTTTAATGTTTGATGTGCTCTTTCCACAATGGCCTGTCCCTGGGGATTATAAGGGATGTCTGTATTATGTTTAATTTGAAACTTTATACAAAATTCCTGAAAAGACTTAGAAGTATAAGCAGGAGCATTGTCAGTTTTCAAAGCTTTTGGTAGGCCCAAATATGAAAAACAAGTAAAGAGATGTTGTATTACATCTTTAATTGCTTCCCCTGTATGAGCAGTTGCAATAATAACATGAGAAAAGGTGTCTACAGTTAAAGAACAAAGGACAGTTTTCCAAATGAAGAGACATGAGTTACATCCATTTGCCAGAGTACGTTAGTTTTGAGACCGCGAGTATTAACTCCCATAGGTAGACTATTATAAACAGTGGGGCAATATAAGCAAGAACACACAATCTCTCGAGCAGCCTCTCTGGGAATTTGGAATTGATATCTTAAGGCAGTAGCATATTGACGATAAAGTAAGTGAGAGGCTCTGGCCTCCTCAATCACAGTAGCCACTGTATTTCAGGTTAACAAGTCAGCCAAATCATTAAAGGCATTTTAAGGGCCGGGCAATCCAGAATGAGCCCGAATGTGTCCAATGAAAAATATTTTATTTCTTTTCCAAATTTGTTGCTGTAATTTAGTTAACAAATGAAATATGGTAGTTTTATTTTCAGGCAAAACCGCAGTTTCAATGTGTGGAAACAACCTGACAATATACTGAGAATCAGAATAAAGGTTAAATTCCTCATCTGCAAACATAGCAAAAGCCTCTATGACTGCTGTTATTTCAGCTCTTTGAGATGAAGTTTCCCGTGTTTCTAAAACCTTTTGGTGATTTTTAGTAACTATGGAGGCTTTACCATTTGCTGACCCATCAGTAAAAACTATTTGAGCATTTAGAATAGGAGATTGTTTACATCTGACAGGAAAAATAACTGGATGTCTCGATATAAAATTCAGCAAAACATGTGAAGGTAAATGATGCAAAATTTTGACCAAAATGGTTTCCTATAGCAATCTGCCAATTTTTATCAAACATTAGAAGAGCAACAAGTTGTTCCTTAATGTATGGAATTACAATTTCTGATGGCTCTTTACCAAATAATCCAATGTTCCGCTTTTTTCCTTTAATATCAAAGTAGCTATCAATCCTGGATAAGAAGCCACTACTTTTTTAGTTTGAGCGGGAAGATGGACCCACTCTAGGGGGGCCATTTTGCCAATTTTTTGTCTGGTTACCCCAGTTACACCTATGGGGGTTTTATGGCAAAGGAATTATCAAGCAGTTGTCAATTTAATTTTTAAAATTTACATTTTAACAATATAAATTTAGAGATATGTTAATTTAGGTCTAATGTTTAGTTTAGGTCTCCGTATAAATTTAAATAATAAATGTATAACCTCCTTATCTCATTTTGATATACAGATATACCTAAATGCAAAATGTATTTATATATGGCAACAAGTATAGACTTATTGACATAATATACTTGAATTAATCTTTATAATTAATGTTAATTAATATATATTACAGCAATACAACACGTAGACAGCTAATACCAACCAACACAAACCAATGTACTGTAATAATACATGTCACACATATATAATTATACAGTATACAGGACATATATCATCACAGCACATCAATCTATACCAATTAATATCAGCCACACACATTATATTACTGCAATATACATTTAATTATACAGTATATATATAATATGCATATATAGTATACATACTAATTTATATACAAATTAATTAAGTATAGATCTATAAATAGAATTAGGTATACCTTTATTATATTTTATTTATACCCATATCTAATTAGGCAAACTGTAATTAGGCAAATATATTTATATTATGTATTTATAACAATATATAAAGTATTGTTAATTGTACCTCCTGTTGATAACTAAGAAATTGAGAAAACCCTTCTCTGAGTATCTCCTATTTGAGACAGCACGTCCCTCCCCCACAGGGTAAAGTGGAGCATAGGAACTACATACGGTTGGAAAGTTCCACAGGTATCCTCAAACTGCCAATCTAACATTTTTGAACTTTTAACTACTGTGGGGGCTTGAGGGCAAATGAAACAAAATTTGACCCCTGAAATCTATCAGGGCAACTTGCCAATTATCACTATTTCATAAAAGACTTGCAGTTGATCCTTATTGAGTGAAATTATTATATTTGCTACTTATTTTCTAAAAAGTTCCACACTTCTTTTTTCCTCCTTTTATAATTAATTGTGCCACCAAGCTGGATAAAGATAAAACTATTTTTCTTGGGATCACTGGTAGATGGAACCAATGGGCCTTTTTGTCACAATCACCCTGTAGGTGTATGTTTTATGGCAAGAATAATTTAATCTTATCTTTTGGTAGTATTAATCCTAATTAACTGATCATTTAAAGTCTCATACACTTCAACAAGAGCTAACTCTGTCTCATTAGTTAACTTTCTCTTAGAACTGGAATTAGGATCAATTTTTAAGCAATCAAATAAAGGCTTTAAATCTGCAGTAGTCAGTTTTAAATGAGGGCGTATCCAATTAATGTCTCCTAATAATTTTTGGAAATCATTTAAAGTTAGTAAACAATCTCTCCGCAGCTTCAAAGGGGCATCATCAGTTTTTAAAACTTTTGGCAGACCTAAATATGAGAAGCAAGTAAAGAGGTGTTGCACAACATGTTTATAAGCTTCTCCAGTTATCGTTTTGTAAACGATTTTGTAAAATCTGGTCTATAGCCTTTTAGATGACAAGCAACCATCTAATCTTTGCTTGAATACTTCCAGCAACGGGGAACTCACTATTCTTCAAGGTTTTAAACTCTCCCTCACCTTTTTCTCTACAGCATTCCCACCCCGCATACCAGTTTCTCTAATCTCAACTCATTTTCAGTAATATGTGTTGGCCAGGAGCTGGGTCAGTCTTTCCCAGCAATGTTAAGAGACGTCTGTTCCTGTGTCTAATAGCCCTGACATTTTATTTTCTTGAATTAAAAGATCTTTTAAAGGCCTTGGAGCTGTAATTTCCTGCACCCAAAAGGCTGGATCACTAGATCTAAACGCTCTGTGGCTCTTAGCTTGAGAAGTCAAGTTTTTTCCTGCCTGATAAGGTAAAAGAAAAACTGTGTTATTCTTTGACCTTTATTAATTTGCACAGTTTTGGTAAGCGGCGAGATCAAAACTATAATTTCTCCAATATAATCAGAATCTACCACACCATATACCACCGAAATTTCTTGAAAAGAAAGCGAGCTACACCCTAGCACAAGTCCTACAATGCCCTCAGGCAGGGGGCCAGCCACTCCCATTGGAATCGGAGCAACCGGCATATCAGGGGTTAATATTGTTGCTAAATCCCTTTACAGTCCGCTTTTTTCTTAGCCTGGGTGAGACCCCCCTGAGGGG TCONS_00052399 . 5' 1039854 TCONS_00052399 . 5' 1039854 EMBV3_13693 CGGGAGGCGCCCGGCAGCCTGCTGCTCTGCCTGGCAGCTGGGCCTGGCGGAGGCGCTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18425 CCTGTTCAGGCTGGTTCCTTGGCCTGCCACTTTGATGGAGGAGGTATTGTAAGCTTTCCA Gene GeneID:510459|HOXA9:NM_001105617:1_cdna Constitutive 1 NULL GeneID:510459 4 GENE HOXA9 MGC155055 homeobox A9 EMBV3_30663 GAGCCTCGAGTCCAAAGCCGAAAGAATCGCCAGCAGGTCCAGAAAGGACCCCGAGGCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25690 GCTGACTGTGTTGTTTCTGCATATAGACCTCTTCTTCAACCTAGAAAAGCTCTCTCCCCA Gene BVV0102_395958 - 1 EMBV3_22770 GK000008.2:103943471-103981751 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12038 GGTAAAGCAAGCTGCAGAGAATCCAGAAATGCAGATTGAAGTTCCAGAACAAGGCAAAAG Gene GeneID:781881|SNX31:XM_002692780:45_cdna UTR3_Alt 2 NULL GeneID:781881 14 GENE SNX31 NULL sorting nexin 31 EMBV3_12627 TGGCTGGGATTTGAAAAGAAAAATAATCAGGTTATACAGAAAAGAAGTTTTACAGAAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05825 AAGAGGACGCCTTACTTTACCAGAGCAAGGGTCCGTGATGACAATCTTTTCTCTTTGGAA Variant GeneID:399681|EMD:NM_203361:31_cdna 345^478 3 EMBV3_13005 GeneID:399681 X GENE EMD MGC128971 emerin EMBV3_34134 CTGATCCAGTGTCCAAGAGTTCAGTTTCAGGATAGAGGTCCGGTCAAGGCCAACCCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25251 CGTTTCTAAGACAGATCAAAGGCGAGACACAGTGGGAGCCAATGCTATGTACAAGGGGAG Gene BVV0102_088990 + 0 NULL GK000005.2:109894994-109925708 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27641 GTATCTCCAACCCTGTCACCAAGGAGATGCTCTTCGAGTTCATTGACAGATGTGCAGCAG Gene GeneID:511408|RNGTT:NM_001046085:11_cdna Constitutive 0 NULL GeneID:511408 9 GENE RNGTT MGC137559 RNA guanylyltransferase and 5'-phosphatase EMBV3_18441 ATCCCTGTAGATGTCATGAGACGAGCTGGAGGACCTTATGATGTGGTGGTTCTTCCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29976 CTGCATGTAGAACAACTACAGAACACCTTCTGAATGATGGCAGAGGACCCTAGACTTCCA Gene BVV0102_166847 + 0 NULL GK000030.2:98961207-99078133 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252929 1 XLOC_155870 NonCoding TCONS_00252929 XLOC_155870 NonCoding NonCoding - X:99014641-99015952 - TSS190150 1311 4 TCONS_00252929_3 48 0.212814645308924 1 0 0 0 0 0 0 0 0 0 0 0 1.74613779047587e-06 0.000199103795537645 0 0 0 0.00100730553653122 0 0 0 0 0 0 0 0 0 0 0 7.32659864583953e-06 0 0 0 noncoding 0 0 0 0 -0.0687820449004101 0.68464352861949 -0.0577370999124699 0.447412563993278 AAGTAGAAATACACATGTGAGACACTGTGGTGAAGATGAGTAGCTGCAGTCTTTGGACATTCAGCAGAAAGTCCACAGAACATTCTCCAGGAGGACTGGTAGTGATATTGGTGAATCAGGCCTCAGTGCCCAATGAAATTTGCAAGATATAGCAATACAAGGTATCTGGTCAAGGTAGTACTATAAGAAAGAGTATTACTGTAGCAGCAGCATTGCAGAGATACTTTGTTATTTTGAAACAAGAAGTACTTCAGGATTTCAAGTCAAAAGACACTGTTTTACAAAATTCCAATGGGATATATTGTATTATTTTATTGGAGACATTAATGTGTGTGATGTGCATGGTATGGTGTAAAAGGGATTATGTTTCCTGCAGTTTGTGAGCAGAGTATCCATTTTTATTTTCTTTTTAAGGACAGGGTCTTGGTAGGGAAGACCCTGAGAACCTAAGTCAAATAAGTCTGTCACTGCACTTCTTATGAATAAGGCTGCCTATTTTATCCTATACATGTGAGTGCCTTGCCTGGGAAAAGAATTTGTGTTGGTAGCTAACTTAGATATGCATAAACTCAATTTATATGGAAATCCACCTAACTCATTTAACAGAGAACTAAAGAATGAACCTATTTTGTAAACATTAGTATCAGTTGAGGTTTACATGGTATATTACAATTTTGGAGACTTTCAAGTTGGCAGAGGAGTAAGATGGGAAGATCACCTTCAGCCCCACAAACATAAAACAAAAATTTATCTGCATGTAGAACAACTACAGAACACCTTCTGAATGATGGCAGAGGACCCTAGACTTCCAAGAAGTCAAGCCAATCTCATCAGAATGAGGTAGGGCAAAAGATAAAGATTTAAAAAAAAAAAAAAAAGGACAACAGATTTCAGGAAGGAGACCTGAGCCCCAAAAGGTGGTCGTGAAGCAGGAAAAGTTTCCACATACTTGGAAACCTGCTCACAGATGGGATCAGGGGAGCTCAGAGGGGAATCTCAGAGGAGAGCATAGCGACAGTTGCTCTAAAGGCAAACTCGAGAGAATTAATGACAGAGATAATTTGTGAATGGCACTTCCCAGCCATGAAACAACTTGCACACTTGCAGCAAGTGGTGGCTTGGAGCTCAGGCTCATGCTTCGGGGGTCAGACATCAGGAAGAGGACTGGGGTTGACTGCCGTGATGATACTCTGAGGGGGCTAGTATGACATATCTGAGGGAGTCCAGGGAAAAGCCTGGGCCTGTCAGAGAGGCAAAAGATCATTGCCACAGGAATATTCTGACACAGTAAGCCCACAGAACATAGGACTC TCONS_00245286 . 3' 53436 TCONS_00245286 . 3' 54746 EMBV3_18399 AATTGGCTCTGGAGCCCAAGGAATTGTTTGGATCTGAAGCCTAGTAACATTGTAGTAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43428 TCTCGAGGAGAGAAACAACGCATTGCTATTGCTCGGGCCATCGTACGGGATCCGAAAATC Gene GeneID:531150|ABCB11:XM_002685285:79_cdna Constitutive 0 NULL GeneID:531150 2 GENE ABCB11 NULL ATP-binding cassette, sub-family B (MDR/TAP), member 11 EMBV3_41511 AAAATCAGACTCACATCTCCCACTTCATCCTCCTAGGCCTGTTCAACCACACACCACTGC Gene GeneID:614931|LOC614931:XM_002689050:2_cdna Constitutive 0 NULL GeneID:614931 7 GENE LOC614931 NULL similar to olfactory receptor MOR277-1 EMBV3_35358 GAGCAGCGGGAGGTACATACAAAAAGACCGCCTTCTCAGGTTCCCTTGTAGTAATGGCTA Gene BVV0102_353566 - 1 EMBV3_21311 GK000018.2:48113579-48140548 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41058 GTCAAGGGTGGCACCTCACCTGTGAAGGAGAGCCCTGCCATCATCGATTCAGACCCGGTG Variant GeneID:282182|CITED1:NM_174518:5_cdna 253^627 1 EMBV3_27017 GeneID:282182 X GENE CITED1 NULL Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 EMBV3_21290 CTGCGCTGAACAGTATTCGAGTTACCATACAATATGGCTTTACACAAGGAAATGTGTGGC Gene GeneID:541048|GLCCI1:XM_002686688:106_cdna UTR3_Alt 2 NULL GeneID:541048 4 GENE GLCCI1 NULL glucocorticoid induced transcript 1 EMBV3_36126 CCCTTCTGGGCCGTGTGGCTGTGTCTGCTGGTGATCTGGAGAGCTTCAAGAAGCAGTCCT Variant GeneID:338054|ARHGDIA:NM_176650:36_cdna 265^348 2 EMBV3_00154 GeneID:338054 19 GENE ARHGDIA NULL Rho GDP dissociation inhibitor (GDI) alpha EMBV3_18243 AGTGTCTCTCCTAGGGCCTTGCTTTTCCTGTTGCTATTTCTGCTCGGGATTAGGCATAGG Gene BVV0102_407762 + 0 NULL GK000003.2:33325105-33337765 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23973 GACATGAACCCAGGCACTGGTATTTGGCAGAGCATTGATGTGAAGACAGTGTTGCAGAAC Gene GeneID:281187|MSTN:NM_001001525:6_cdna UTR3_Alt 2 NULL GeneID:281187 2 GENE MSTN GDF8 myostatin EMBV3_38342 CAGGAAATTATGAAGACAGTGTGCTGGGTTTTCTCTAAGCACAGACTTCCAGGCTGCAGG Gene GeneID:507169|TRRAP:XM_002698217:798_cdna Constitutive 0 NULL GeneID:507169 25 GENE TRRAP NULL transformation/transcription domain-associated protein EMBV3_08999 ACCCACGATGTACCAAAGCAGGCTGGGCTTACGGTTCTATTTATTGCCTTCCTCGTCCCT Gene GeneID:519613|REEP4:NM_001034533:3_cdna Constitutive 0 NULL GeneID:519613 8 GENE REEP4 MGC126940 receptor accessory protein 4 EMBV3_00580 CAGACTGGTGGCCTGTGTAGCACTGTCCCTCAAGATATGCAGAGGTTTCCATGATCCATT Gene GeneID:511439|SLC28A1:NM_001037458:108_cdna Constitutive 2 NULL GeneID:511439 21 GENE SLC28A1 MGC128078 solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 EMBV3_36127 TGAAGCAGGTGAAGGTGCCCGTCGTGGAGAACAGTGTCTGTGACAGGAAGTACCACTCTG Gene GeneID:281545|TPSB1:NM_174202:36_cdna Constitutive 0 NULL GeneID:281545 25 GENE TPSB1 MGC159695 TPS2 tryptase beta 1 EMBV3_27398 GCTGTCAACCAGCAGTGGAAAGTGCTGAACTATGACAAGGCGAAAGACCTGGAGGAGCAA Gene GeneID:527624|MARCH4:XM_002685569:13_cdna Constitutive 0 NULL GeneID:527624 2 GENE MARCH4 NULL membrane-associated ring finger (C3HC4) 4 EMBV3_14757 ACGCTGCCCAAGGAAGGCAAGAACTCTCAGGTGTTTAGAAACCCCTACGTGTGGGACTGA Gene GeneID:535664|GPRC5C:XM_002696193:205_cdna Constitutive 0 NULL GeneID:535664 19 GENE GPRC5C NULL G protein-coupled receptor, family C, group 5, member C EMBV3_15077 ACACTGGAACAACAAATGTAAGAATGGTTAACACTGGGAGATACACACTTCTCTAATTAC Gene GeneID:100298968|LOC100298968:XM_002689394:11_cdna Constitutive 0 NULL GeneID:100298968 7 GENE LOC100298968 NULL similar to Nedd4 EMBV3_26847 AGCAGCGTGCGCGCCGAGAGCTGTGGCCGCGTGTTCTTATTGCGTGGTGAACGTTGAAGA Gene BVT0102_162339 - 0 NULL GJ060127.1:1-4950 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03971 TCCGGAGCTTGAATCCACCTTTGACCATTGTCCGGAAGACCTTCGAATCAACAGAGAACC Gene GeneID:514387|TRIP12:XM_002685671:449_cdna Constitutive 0 NULL GeneID:514387 2 GENE TRIP12 NULL thyroid hormone receptor interactor 12 EMBV3_10768 AGCATCCACAGTGAGCAGCCCAGAAACAGATGAAGAGATTGAGAGAATGAAGGGTTCTGG Gene GeneID:504796|FAM175A:NM_001015516:13_cdna Constitutive 0 NULL GeneID:504796 6 GENE FAM175A CCDC98 FLJ13614 coiled-coil domain containing 98 EMBV3_25909 CCTCCCTCAGATGGGGATAACAGATTTTGAGGACATGAAGGCAATTTCTCGGCATACCCG Gene GeneID:530413|LOC530413:XM_002691072:150_cdna Constitutive 0 NULL GeneID:530413 10 GENE LOC530413 NULL similar to chromosome 14 open reading frame 174 EMBV3_27282 TTAAAACTTAAGGAAATGGCAGGTGATGTCCCCTAAAACACTCGGCTGTTCAGATTGGAC Gene BVV0102_277419 + 0 NULL GK000009.2:88101564-88115024 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236205 TCONS_00236202 TCONS_00236203 1 XLOC_144401 Coding TCONS_00236205 XLOC_144401 Coding Coding PCMT1 9:88084036-88111587 j TSS176858 1405 1 TCONS_00236205_2 165 7 0.949255898366606 2.14915957464495e-05 0.000584078284174676 2.54271680036957e-08 2.25686200693302e-09 0.000691716045737617 0.000135148518630222 0.000891370823601318 1.09196129024331e-07 0.00189717867488181 0.000370945912585844 7.39608431758441e-06 5.89260847489492e-06 0.000233496907680392 0.00125661631061484 1.50774000059161e-05 0.00539262488733911 0.00208688324417215 0.00695553789803706 0.00227162108084039 0.00124575255128953 0.00123691020214575 0.000428309563814727 0.0020173200249391 0.003286945802461 0.000942306515782183 0.00111056925397633 2.46050421664645e-08 0.000416942576477642 0.00018378761402978 0.000466948686541897 XM_005211040.1 PCMT1 PREDICTED: Bos taurus protein-L-isoaspartate (D-aspartate) O-methyltransferase (PCMT1), transcript variant X2, mRNA. 0.0 2388 100.00 0.941637010676157 NM_001252049.1 PCMT1 Homo sapiens protein-L-isoaspartate (D-aspartate) O-methyltransferase (PCMT1), transcript variant 2, mRNA. 0.0 1833 90.98 0.941637010676157 TCONS_00236205_2 sp|P15246|PIMT_BOVIN PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase; 3e-114 328 100.00 0.975757575757576 4 coding 1 1 1 0 -0.0320046229729569 0.82006309586811 0.00200499065958203 0.978518511550156 GAGAAGATCCTGGGGAGCTTCTGAACCCCGAAGGCACCTGCTACCACCGCTCAGTGAAAACTGCTTCCGATGCAGAAGCAGGGTTCCAAGCAACAATCAGTGCTCCACACATGCATGCATATGCACTAGAACTTCTATTTGATCAGTTGAATGAAGGAGCTAAAGCTCTTGATGTAGGATCTGGAAGTGGAATCCTTACTGCATGTTTTGCACGTATGGTTGGACCTAGTGGGAAAGTCATAGGAATTGACCACATTAAAGAGCTAGTAGATGACTCAATAAATAATGTCAGAAAGGATGATCCAATGCTTTTGTCTTCAGGGAGGGTGCAACTGGTTGTGGGGGATGGACGAATGGGATATGCCGCAGAAGCCCCTTATGATGCTATTCACGTAGGAGCTGCAGCCCCAGTTGTGCCCCAGGCACTAATAGACCAGTTAAAGCCTGGTGGAAGATTGATATTGCCAGTTGGTCCTGCAGGTGGAAACCAGATGTTGGAGCAGTATGACAAGCTGCAAGATGGCAGTGTCAAAATGAAACCTCTGATGGGAGTGATATACGTGCCTTTAACAGATAAAGAAAAGCAGTGGTCCAGGGATGAACTGTAAAAGCAACATCAGCTTGACCAGTATAATAATATTACAGTGGATTGCTCATCTCAGTCTTCAAAGCTTTTGAAAATCAACAGCATCACAGCTTGTTTTGAACTTTCTTACACTATTTTCAGCATGAAAATGTGTGGATTTGTGGGGTTTCTAATTCTTCAGAGAGGCATAGAAGCCAGATTGGAAAGAAGAAGGATGCAGAATATAAATTTGTGTATTATTACTTTAACATGCCCACGTTTTCCTTTAAATATTAAAAGAAGGGGTTCTGCAAAATGGAAAACATGGTTTGTGAATTGATTTTGAGGAGTGACTTTTCTTTTCTTAGGCACTTAATTCTTTTCTGATGTTAATTTATCGGACTGCTTTTGTGCATCAGATAACACCACCATTCACAAGTTAAGATTCTTGGTTTTTGGGTGTATGTTAGATGCTACTAAGAAAATAGAGATGAGCTTCCTTTTTAAAGCTTTTGATGTGGTGTCATAGAATAGCATGTTGTAGATACAATCAGCTGCTTTGTTACCTTAAAACTAAGCATTTGTAAATATTAAAACTTAAGGAAATGGCAGGTGATGTCCCCTAAAACACTCGGCTGTTCAGATTGGACATAACTGACATAGTTCTTCCTTTTTCTCTTTAAAAATAATAGGAGACTTGTAGCTTAGTATTGTTTTTTGTTTCTAACTTGCTGCTCATAATGTATATGGATTTAACATGCTGTGTAAGCTGTGTCCTAGTTACTGAACAGTTTATGCAGTGCTGCTTTGCCAAATAAAGTTAAAAGTGAAAGAGGCATT EMBV3_33251 GAACATCTACACCCTCATCAGGAAGCTCAACCTCAGGGGAAACGATTGTCGGCGTGATGA Gene GeneID:789863|LOC789863:XM_002700413:11_cdna Constitutive 0 NULL GeneID:789863 X GENE LOC789863 NULL similar to melanoma antigen family B, 4 EMBV3_40959 TGCTCAACGACAACTCTTGCTGGACCATCATCGGCACCGAGTCGGTGGAATTCTCCTTCA Gene GeneID:540059|RBPJL:XM_002692476:550_cdna Constitutive 0 NULL GeneID:540059 13 GENE RBPJL NULL recombination signal binding protein for immunoglobulin kappa J region-like EMBV3_20077 TTCCTGTGGAAACATCTCAGGAAGATGCAGCTCAACGGCAAAAGATCCCAAGATCCCAGC Gene GeneID:782957|TAS2R46:XM_002687778:29_cdna Constitutive 0 NULL GeneID:782957 5 GENE TAS2R46 NULL taste receptor, type 2, member 46 EMBV3_30959 GTGATGTCTCCGCCGGACGGAGCTGCTCAGATGTCCTTCGGCCTTCTCCGCGTGTTCTCC Variant GeneID:506149|C5H22orf32:NM_001045937:141_cdna 156^226 1 EMBV3_24745 GeneID:506149 5 GENE C5H22orf32 C22orf32 MGC137004 chromosome 22 open reading frame 32 ortholog EMBV3_01954 GATGTCATTGGGCTGTTCACAGTGGGTACTTTTAAGAGGAGGGCATGGCAGGTGGATCGA Gene BVV0102_223581 + 0 NULL GK000017.2:68002703-68248656 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43131 TCCCCATCCCTGACAGTTCTTCCGACTCTTCTCAAGTCCTCAGAGTTACTGTTCACCAAG Gene BVT0102_052128 + 0 NULL GK000007.2:63779272-63816087 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22100 CTGTGTCTTCCTATCTGCTGGGGGCCTTTGTCTAAGAGGCTGATCCCTATGTTGCCATCA Gene GeneID:100337013|LOC100337013:XM_002695071:477_cdna Constitutive 0 NULL GeneID:100337013 18 GENE LOC100337013 NULL EGF-like-domain, multiple 4-like EMBV3_37762 CTCTGACCCACTGCTTTATATGATCACCATGTCCCGGAATCTCTGTGTGGAGTTGGTGTC Gene GeneID:511893|LOC511893:XM_002693851:18_cdna Constitutive 0 NULL GeneID:511893 16 GENE LOC511893 NULL similar to olfactory receptor 601 (predicted) EMBV3_03754 TGTGGAGGGACTTCGACACCGATCTGAACTTTTGTGTCGTGACGCCTTTCTGGATACACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05710 CGGGAGGCGCCCGGCAGCCTGCTGCTCTGCCTGGCAGCTGGGCCTGGCGGAGGCGCTGGC Variant GeneID:512094|ALKBH4:NM_001075553:152_cdna 641^961 1 EMBV3_13693 GeneID:512094 25 GENE ALKBH4 MGC140820 alkB, alkylation repair homolog 4 (E. coli) EMBV3_00746 CTGGATTTATTGTCTTCTGAGGGGGGTGCTGTAGGGTCCTTGACATGAATAAAGGTGGGC Gene GeneID:767618|ZNF574:NM_001076539:445_cdna Constitutive 0 NULL GeneID:767618 18 GENE ZNF574 MGC137637 zinc finger protein 574 EMBV3_12758 GTCAGAGTGGAGACGTACTAAGTGCAAGATATGAAATTGTTGATACTTTAGGTGAAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22831 CTCGGAGGCGGCGGGCGGAGGCGGCGGCGGGTACGAGGAACAGCAAATTCAGGAAAAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43336 CACATGTATGTGATAAAGGACCTTGTTCCTGACGGGCTCTATGAGTGTATCCTCTGCGCC Variant GeneID:286840|SDHB:NM_001040483:42_cdna 444^560 1 EMBV3_14874 GeneID:286840 2 GENE SDHB MGC127046 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) EMBV3_18251 GCAGCTGCCGTGGCCGCGAGTCGGACGAAGGATGTATCAGGATAAACTGGCTTCTCTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11554 CAATGGCTTCGAGACAACCAGAAGTGCCTGAACAGACCCAGGAGAGCATTCAGCGTTTTG Variant GeneID:508617|MGC127874:NM_001034325:224_cdna 401^706 4 EMBV3_34004 GeneID:508617 10 GENE MGC127874 NULL hypothetical LOC508617 EMBV3_06016 GGAGGTTGATTCCATCCAGCACACCCTTCTGAGTATACAGAGCCCCTACTGTTTGAAGGA Gene BVT0102_375333 - 0 NULL GK000003.2:19728952-19740206 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172384 TCONS_00172386 TCONS_00172385 1 XLOC_104119 Coding TCONS_00172386 XLOC_104119 Coding Coding GABPB2 3:19735502-19761366 j TSS128414 7148 1 TCONS_00172386_3 447 0.123391158365976 9 0.72396860379693 0.00100136784277467 0.000780432632161931 0.000546958362120092 0.000157249564005311 0.000531278609928402 0.000234725346951297 0.000487802704457143 0.000487716692044654 0.000781288841576563 6.63571130130988e-06 8.71368360781139e-09 9.63462937100387e-06 4.49916056173882e-05 4.73051140852602e-05 0.000167019485842717 0.00123759699632656 0.000128947144700744 0.00037796636339062 0.000727784813917919 0.000587949031255079 0.000158819712425409 0.000527953694833862 0.00056642538206102 0.000422463851359319 0.000539742020093867 0.000800888194942132 0.000311962026975967 0.000146270340189269 3.46324608107862e-05 8.57293316120785e-05 NM_001076242.1 GABPB2 Bos taurus GA binding protein transcription factor, beta subunit 2 (GABPB2), mRNA. 0.0 3858 99.95 0.299524342473419 XM_005244882.1 GABPB2 PREDICTED: Homo sapiens GA binding protein transcription factor, beta subunit 2 (GABPB2), transcript variant X3, mRNA. 0.0 2406 89.02 0.254476776720761 TCONS_00172386_3 sp|Q0V8G2|GABP2_BOVIN GABP2_BOVIN GA-binding protein subunit beta-2; 0.0 910 100.00 0.997762863534676 5 coding 1 1 1 1 0.254722475647605 0.647695258634462 0.0137771919635046 0.806078857520127 GCCTCCATTTCTTCACGAGGGGGGGTTAAAGGCCCCCAAAATATGCATATGTGAAAAGGCCAAAAAGTAACCGTCATTGACAGGGAGTCTTAACTAGAAAAGGAAACAGGACAAAACTGGCAGGCTCGGTGAAAGCACAGCCGGCAGCGTCCCGGACGAGGAGCTTCCTGAAAATTTGTGTTCCTATGTATAAAGATGTCTTTGGTGGACTTAGGGAAGAGGTTGCTAGAAGCAGCAAGAAAAGGCCAAGATGATGAAGTGAGAACATTGATGGCAAATGGTGCTCCATTCACCACAGACTGGCTTGGAACATCACCCCTCCACCTTGCAGCCCAGTATGGTCATTATTCCACAGCAGAAGTGCTCCTTCGAGCAGGAGTTAGCAGGGATGCACGGACCAAAGTGGACAGGACCCCTTTGCACATGGCTGCAGCTGATGGACATGCACACATCGTGGAACTACTTGTTAGGAATGGTGCAGATGTGAATGCCAAGGACATGCTAAAGATGACAGCTCTGCACTGGGCCACAGAGCACCACCATCGAGATGTTGTAGAGCTGCTTATCAAATATGGAGCTGATGTCCATGCTTTCAGCAAGTTTGATAAATCTGCTTTTGACATAGCCCTGGAGAAGAACAATGCTGAGATTCTGGTCATCCTTCAGGAAGCAATGCAGAATCAGGTGAATGCTAATCCCGAGAGAGCCAACCCTGTGACTATGGCTACCCCATTCATCTTCACGTCAGGAGAAGTTGTCAACCTCGCAAGCCTTGTTTCTTCAGCCAGCACCAAGACAACCTCAGGTGACCCCCATGCCTCCTCAACAGTACACTTCTCAAATTCTACCACCTCAGTGCTGGCCACCCTTGCAGCTCTTGCTGAGGCATCAGCCCCCCTCTCCAACTCACACAGAGCCACAGCTAATTCAGAAGAAATCATAGAGGGCAATTCTGTTGATTCATCAATCCAGCAAGTGGTGGGGAGTGGAGGCCAGAGGGTCATCACCATAGTGACCGATGGAATCCCTCTGGGTAATATACAAACTGCAATCCCTGCTGGAGGCATTGGCCAGCCATTTATTGTGACTGTGCAAGATGGACAGCAAGTTCTAACTGTACCTGCTGGTCAGGTTGCAGAGGAGACTGTCATTGAGGAAGAGGCAGAAGAAGCAGAGAAATTGCCACTGACTAAGAAACCAAGGATAGAAGAGATGACAAACAGTGTGGAAGAAAGCAAGGAAGGCACTGAGAGAGAGCTACTTCAGCAGCGCCTCCAGGAGGCTAATCGAAGAGCCCAGGAGTACCGACACCAGCTCCTAAAGAAAGAGCAGGAGGCAGAACAGTACCGTCTCAGACTGGAGGCCATGGCCCGACAACAGCCCAATGGAGTTGATTTTGCCATGGTTGAAGAGGTGGCTGAGGTAGATGCTGTAGTAGTCACGGAGCGGGAGATGGAAGAGAGAGAGACAGAAGTGACTGGGGCAGTAGGGACCGCAGAGCCTCATACTGGAGTTTCCATGGAAACTGTTTCAACTTAATGTGCAAGGGCCACAACTTGTACTGTGTTCATCTTTTTCCTCTTAAAAAAAAATACAGAGGACAAACATTGTGTAAAAATTAAGAATGTCCTAAAGAAGAAAATTATAGCAGGGTACAATGCTATAGGCTACAACTTGGGCTCAGGAAAGCTCTCTATGCAACTGGAAAATTTGAAGCCAAATTTAGGGAACACGTCTTCTGAGGGTCCAGAATAATAAGGACCAGATTTCTCAGCTCACATCATTGCTTGAAGCATAGTGGTAAAAGAAAGGTGGATGTTATGGACCGATTGTTTTTTAAATAACTGACTTTCTATCAGAAGATTTTGAAATAATATTTCTAATATGTACATACCCAGAGCCTTTAATAGTTGTACCATCAAGTGACCTGAAACTTTGCCTTAGATTATGATGTGTACCCATTAGGGAAGAAACCTAATTGGGAGGAGGGATTAGATGTAAGCTTTGGGGAAGACAAAGAAATATACTCTGCTCCCAAAGGAACAGGCAGGCACTCCCCACTCTCCTGAGTTAATTTCCCTGAGAAGAAATCACCTAAGTAAATTTGCATCCACTGTGTGTCCATAGCCCAGATGCCCGTTTAAGAAGCTAAAATAGAATTTTTAAAAACTGGAAAGGAAAGAAAACTTGTTCATGTGCGAGAAGTGTATGTAGATCCCAAATCCTCCAGCTGCACCTCTGCGATGCTGGAAAGTGGCCAGAAAAGAGGCCCATGGGGTTAGGAAACAGTCTGGTCTCGAGATACCAACTTCGCTTTGGCTAGATTTTATGAAATTGCAATGAGGAGGGTAGTCTGCTGTCAGAACAACTTGCTTTCAAACATTTATTTATGTAATGTCAAGCTTTAATATCAACTTTTTTTAAAATATAAATTTATTTATTTTAATTGGAGGCTAATTACTTTACAATATTGTATTGGTTTTGCCATACATTGACATGAATCCTCCACGGGTGTACACGTGTTCCCCATCCTGAACCCCCCTCCCACCTCCCTCCCCATACCATCCCTCTGGGTCATCCCAGTGCACCAGCCCCGAGCATCCTGTATCATGCATCAAACCTGGACTGGCGATTCGTTTCACGTATGATATACATGTTTCAATGCCATTCTCTGAAATCATCCCACCCTTGCCTCTCCCACAGAGTCCAAAAGACTGTTCTATACATCTGTGTCTCTTTTACTGTCTCACATACAGGGTTATCGTTACCATCTTTCTAAATTCCATATATATGTGTTAGTATGCTGTATTGGTGTTTTTCTTTCTGGTTTACTTCACTCTGTATAATAGGCTCCAGTTTCATCCACCTCATTAGAACTGATTCAAATATATTCTTTTTAATGGCTGAGTAATACTCCATTGTGTATATGTTAAACTTTTTAACTTTATAAAATTTTGTTGAGTTTGCTAAGTGTGCCTTTCTGTGGAACTTACATGGTATCCACTCATATGCAAGAAAATACAGGAGAGATGAAGGCTGAGGATGTTGTATAGTTTTTATCCATCTGATTTGGGATGCGTACACTGTTTTCTAAGATCAGGTCTTGTGTAGAGCTTTTGTGCTTTACAGGTGCTCAGTGTGTTGGCAGAGGGGATAAGGACAACCAGTGCCATAACGTAAGGAACCCGAGATTCTGGCCAGATCTTTGTCACCTTACTCTTCTCTCTCCCACCATGCCTGCTCCTTTTGCCTAGACACTTTAGAAAGTGTTTCATTGCTGGGATTTCTTGGAGCTTTTTTTTAAAAAGAGAGTTGGAATATGGGTGGAGAGAGAGAGGTTGTGGAGAGGTCATCATCCTGGACTTGCTTTGTTATAAATTAGAAGCAACCAGAGGGAGATGTGAAGGACAGGGAAGCCTGGCACGCTGCAGTCCACAGGGTTGCAAAGAGTCGGACACGACTGAGCAGACTGAACAAGAGGGAGATGTGCCAAGTAAACAGTTGAATGACTGTTTAGAATAAGGTTTTCTTAATTAGCGATCATGGGGAAAACATATATTTTTAGTTTGGAATAAAATGTGACAGTTAACAGGGTTCTGTTTACCTTGATTAGTGAAGTAATTTGCTGCAGTTTTCCAGAGTAGAGAATCATTTAGGGCTCAAAATAGACTGTAAACATAACTCCCCAAACCAAATTTAACAAAAGTGAAAAGAAAAGTGAAAGTGAAGCCGCTCCATCGTGTCCAACTCTTTGCAACCCCTTGGACTGTAGCATACCAGGCTCCTCCATCCATCGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATTGAACTCAGGTCTCCCGCATTGCAGGCAGACGCTTTACCCTCTGAGCCACCAAGGAAGCCCCGAAAGAATTGGCTATTAGAGGCTTATAGACAAAAATATCAGTTTTGAAATGAATCTTGGCTATGGGCCACCTTAGCTAGGTTTTCTCCATGGACCAAGTACTGAGCACTTTCCAGATGATCAGAGATTAGTCTGCACCATTGGGGATGGTGGAGAAATGCAGTGGAGCAGCCTAGGTAAGGGTGAGTGTAAAATGGTGGTTTCTGCTGTCAAATCGTCCTGTTTCTATTTGCAATGTTTTTCCTTTTTCTGAGTCCCTTTGTGAATCAGGTGCTAACAGTAAGCTGCTATTGTGTTCCATTTCAGAGCTTTAGCTTAACTATAGAGGGACCAAGTGTTATTTTAGATGTGTTTTGTGTGTGTTCTTGGTGTATATACTGACTTCAGTTCCTTATTATTTTTTTTTTTTTCTTTCCTGTTAAGGGGGTGGAGGTTGACCTTGCAGAAAATATCTAGGTCCAACCAGCTTACTCTCTAAGGTAGCTTCTGATGGAGGTTGATTCCATCCAGCACACCCTTCTGAGTATACAGAGCCCCTACTGTTTGAAGGAACTGTTTAGAGGTTCTTATTCTTTTTCTGTAAAAGCCTATCATTCCCACCCAGAAAAAATATCTAATATAGCCCAAGTCATTTTTGATGATGGGGTCTCTGAGACAGGGGGGTTTAAGGAGGGGTTGGGTTAGGGAGAGAGAGAAGGGTGATGTTTGGAAAGGAGTGGGTACTAAAAGGGCATTTGTTTTTATTTACCTGGAATAGACCATTTAGCATTCCAGAGAAGGGAAATAGGATTTGATCTCTAGTTGTATTGCCATAGAGAGAATGGTAGGTCAGGATCCCTTGTAGTAGTTAATATTAATGACATTATTGGGAGTACCATTATATAATTGTGCATATTTTTCTGGATCAACCTTGGAAGTTGGGAAAATGTGGCTAGGTCTTCTGGGTTTGGGAAATCCAACTGGCCTATTGGCAAGGTTGGATTACAGAGACTCAAATAACAGACAGGTGGTTCAGAGATGGTACTTGAACAGGAAAATCTGAAACCTGGATGACTGCTTATTTTAAAATAAAGCTGCTTTAATAGTATCAGTATTAATATAGAAATTTTAGACCCTACATTTACATTATGGTTTTAAACTTCCCCCTAAATAAGAGAAAGAAATAAATCTTAATATTTCTGTTCTTGTTCCTGGCTTCAGGGAAATTACTTACAAATGTATAGATGGACATTCCCTTCCTATCACTACCTCTGTGGGATCTCTTAATTATAATGCCACAGTTGAGGTCTCTTACTTGAAATATGAGAGAACTTGGCTTTAGGTTTTCTGTATTTTGAACTCAGCACCTTAAAAGAGTTCCTTTTTTCTCTGTCATATCTGTTTCATTATTTTTGGCTTTGCCTCGTCCTCTTTTTCAGCCTCTGCATTGCTTCATTAAGATTTTTGTGTCTGCTCAGTAATACTAGAAATCTGTGGCATACAAAATGGCTTTCCTTTCTTTCTTTATATTGCTGTAAAAGAAATGAATTTACCAGAAGGCTCTCCAGTTGAAGTTAGGTATTTTGTGACCAGTGAATTTTTTTAACACCCCTTTGCTGCATATATATTATTGTGTATGTTTATAAATACATATGAATTTTCCCACTTTTCTCTTTGTTTTGAGGTCCAATTCTAAAAAGTACCTGGTAAAAGCTGGAAATATTTTTTATCTCATTGAACACTTTAGAGAGGGTTTCTTTCAATTCATTAAAGGGACTGAGGAAGAAAAAGTATTACTTTGGCCCTTTTCTGAGAGGCACACTCAACAGGCAGTAATGAGAAACCTGAGGAGTAAGGCCCTAGGGAGAGCCAGTACCTGGCTTTGCAGAGATTTCTTCAGCATGTAGTGTGATGACATCATGTAAACTGAAAGCTTCAGAGCAGAGTCGGGGGTGGAACTGGAGCAGCCTTTCCACAGAGCAAGCCTCCTTTCCACTCCTGTGGCAGCTGTTTTGACTGACATTTGCATAATTTCTTACACTTCTGAATAGGAAAGAAACTCTAGATAAATGTCCGTGGCAGAAGGTGCAGACATTCTATACATCTGCTTTTCTGGTTTAGACACCTCATCCTTTTAAGAAAAGATCATTTTGAGAAATTTCTGTGGCTCTCTCCTAACAAACAACATCATGGATCCCCAGAACTCAAAGACCTGAGGCATATAGAGAACTATTTCCAGAAGTTTAATCCTGAATGGCAATTAGTCCTTGTCCAGATTTATTGGAGAATGGCCTCTTGTTCTCTGCTCCTTGTGTAGACATCTCTGTATGGCCAGAAAAGGAGCTTTAGAATGGAATACAAGCCAAGCACACCTATGTGCTGCTCTAAGCTCTTATCTATTTCCATTTTATATTTTCCCCTTCTGAGTTAGTATTCTATTTCCTGTGCCAACATATTTACCAAGAGACAAGAGCAAGAAGGATGTGAATTCAGTTTAAGTAGCTTTGAACCTCTGGTACTGCCTTTTTTTTTTTTTCTAAGCCTCTCTAAGATTAGGAGGTGGGGTGATACCCCAAGATTGTACTACAGAGCAGTTTGGCTTGTTAATGGCAGGAAATTGTGATTCCCTGTCTCTCTCCTCCCCTTCCCCTCTAACTACTTCCGCTTCTGTGACCCCATTGTTCTTATCTCATTGAGTCTTTCCCAGGCACTGGGACTTAATTAGCAGGTCATTTCTAATCTATGGGACTTGTCTTTCCTCTTTCTATTCCCTGCCTTCCCCACCACATATTTTCTGTTTATTAAGTGGTTTATTCTTAATTCTGAGAATTAATCTAGGTCACGCTCTATATCCTGTGCTTCCTCATTGGTTTCAGGCATCTGGTTCTGTCAGCAGTAATGATAACAGCTCCCTTCTCTGGCTTTGCCCTGTGTTCTGTTCTTCTGCCAAGGCCACTTGTGTTAGGCCAGAGAAAGGGTAGGTGGGGTGCTTAGCTTCTCAAAACAGCTTCAGTTTTACAAGTTGTCTGACAGCTTTATGTACAATATATTTTAGGAAAACAAATCTACTTCTCTTTTATTTAGGATTTTAATAAAATAGGGTTTGAATCTGATGAGCAAGTTCATGTGTGTGTGTAAGCATTTATGTGTATGTACACCTATACAAATATATATATACAATTTTTGTACTATCATTTAAAATAAAAAGATATTTCTTAATAAAATGTCGAAGTCTTACCATT EMBV3_26233 GAGCAGTTCATAGAGCACCTGTATCCGCAGAACTTTACCTTTTGACAAGTTGGTACTAAG Variant GeneID:539498|LOC539498:XM_002685484:205_cdna 79^233 1 EMBV3_15179 GeneID:539498 2 GENE LOC539498 NULL similar to JmjC domain-containing protein C2orf60 EMBV3_09261 TCGGGACAAAACCTCAATTTAGAAATAGGTTGCGAACCGCAGGCCAGGAGGTTTGGCCGA Gene BVT0102_292895 + 0 NULL GK000009.2:61626096-61666495 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235663 TCONS_00235664 1 XLOC_144276 Coding TCONS_00235664 XLOC_144276 Coding Coding RRAGD 9:61644456-61677020 = TSS176580 364 1 TCONS_00235664_1 55 4 0.988944507569941 0.00859300878628778 0.00108364562469876 0.00203704891647818 0.00152468046326673 0.00299270888589189 0.00110701801743604 0.000695163319018177 0.00128283993908565 0.000397992886190619 0.000344838750705927 1.51988845641731e-05 0 0.000173692616397576 0.00115693352872939 0.000627937101917451 0.000145118630197044 0.000758359543653264 0 0.000895245368454062 0.000643871099739888 0.00157003967063701 0 0 0.000417893554043469 0.00243571431172408 0.000739879403622653 0.00260865127950432 7.91579511252741e-05 0 0 NM_001192828.1 RRAGD Bos taurus Ras-related GTP binding D (RRAGD), mRNA. 1e-152 542 100.00 0.821428571428571 NM_021244.4 RRAGD Homo sapiens Ras-related GTP binding D (RRAGD), mRNA. 2e-73 279 80.19 0.799450549450549 TCONS_00235664_1 sp|Q7TT45|RRAGD_MOUSE RRAGD_MOUSE Ras-related GTP-binding protein D; 1e-14 68.2 72.55 0.872727272727273 0 noncoding 1 1 1 1 0.0319057573752521 0.774931519136585 0.0577696976396569 0.33475082403403 GCCGACCGCCGCGGGGGGAAGCGCGGTCCCCGCCCCCGCCCACGGACCTCGGGACAAAACCTCAATTTAGAAATAGGTTGCGAACCGCAGGCCAGGAGGTTTGGCCGAACCCCCACCACCAGGGACCCCCGTTGTCCCCGGGACGGCCGGCCGTGGGCGCGATGAGCCAGGTGCTGGGGAAGCCGCAGCCGGAGGAGGAGGAAGACGACGAAGAGGAGGATGAGCTGGTGGGGCTAGCGGACTACGGAGACGGGCCCGACTCCTCGGACGCCGAGCCGGACAGCGGGGCGGAGGAGGGAGAAACCCAGATTAAGATTAAATTTAAATAGATATTTTTTGCCATTTTTGTGTGAGCTTTTTCTCA EMBV3_25826 ATGATGCGGAACCAGGACCGAGCTCTAAGCAACCTGGAGAGCATCCCTGGAGGGTACAAT Gene GeneID:533021|UBQLN4:NM_001080295:174_cdna Constitutive 1 NULL GeneID:533021 3 GENE UBQLN4 MGC154983 ubiquilin 4 EMBV3_40898 AGTCTATCAGTACACGTCCCCAGACTTCCTCTACATCCGCTCCTGGCTGCCCTGCATCTT Gene GeneID:511899|INSIG1:NM_001077909:640_cdna UTR3_Alt 2 NULL GeneID:511899 4 GENE INSIG1 MGC142724 insulin induced gene 1 EMBV3_07081 GCAGGCATGCTGAGGTGATGAAGAAAATCATTGAGACTGTTGCAGAAGGAGGGGGAGAAC Gene GeneID:508571|ATG3:NM_001075364:53_cdna Constitutive 0 NULL GeneID:508571 1 GENE ATG3 MGC140633 ATG3 autophagy related 3 homolog (S. cerevisiae) EMBV3_03565 TGGTAGTCCAGAGGGGTGTGATGGATGATGCTGCCGGTTGTAAAGTTCAGTTTGTGGGGT Gene GeneID:538525|YTHDF1:XM_002692405:351_cdna UTR3_Alt 2 NULL GeneID:538525 13 GENE YTHDF1 NULL YTH domain family, member 1 EMBV3_05030 AGGTGTAAGATAGTTTGTTGTTCAGTATGCTCCATTTTTTAATACACTGCCAGATATTAT Gene GeneID:326584|RPL21:XM_002691838:99_cdna Constitutive 2 NULL GeneID:326584 12 GENE RPL21 RPL21P16 ribosomal protein L21 EMBV3_34531 ACCGAACCACCTCCTCGGGTCGGCGCTGCGGACTATAGCCGGCCTGATTGATCATGGCCC Variant GeneID:523966|CYB561D2:NM_001014937:208_cdna 60^482 2 EMBV3_36462 GeneID:523966 22 GENE CYB561D2 MGC137791 cytochrome b-561 domain containing 2 EMBV3_32355 TGCCTACGGAAGCAACATCTTCATGTATGTGAGACCCAGCCAGAGTCATTCCCTGCAATT Gene GeneID:506317|LOC506317:XM_002699111:155_cdna Constitutive 0 NULL GeneID:506317 29 GENE LOC506317 NULL similar to Olfactory receptor 6M1 (Olfactory receptor OR11-271) EMBV3_39667 AAACTGGGCAGGCTCTTCGGGAAGTTGTGCCGTCTTTGCTGGCAGAGGTTCTGATTCTGT Gene BVT0102_192528 - 1 EMBV3_24714 GK000018.2:43432929-43435069 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083289 TCONS_00083287 TCONS_00083294 TCONS_00086247 TCONS_00083298 TCONS_00083286 TCONS_00083297 TCONS_00083290 TCONS_00083296 TCONS_00083288 TCONS_00083299 TCONS_00083295 TCONS_00083293 TCONS_00083292 2 XLOC_051222 XLOC_052095 Coding TCONS_00083295 XLOC_051222 Coding Coding TDRD12 18:43361955-43435007 j TSS62628 6705 1 TCONS_00083295_8 1294 0.0420581655480984 32 0.908652858961547 2.25939153777181e-12 0.000113970853819251 7.09862686293535e-08 1.03576131976073e-20 0.000125739564511873 2.76373255674315e-05 0.000111043059171661 5.72851546896735e-14 8.15189761966015e-05 1.6320099041202e-18 7.81100709076847e-13 1.29456456190696e-05 1.00421829910754e-10 1.26799734157176e-09 9.27589908463941e-26 9.49776591597064e-41 0.000248940302331204 8.51107243375039e-12 7.18552715101221e-07 0.000214219015450983 2.55058713241205e-05 1.64148029182057e-11 3.33008710344212e-05 4.43324853186534e-05 0.000144481832669264 7.80270954478108e-17 4.64818481449088e-05 5.80888919590415e-06 1.91294435868116e-13 6.88273676130549e-13 XM_002694999.2 TDRD12 PREDICTED: Bos taurus tudor domain containing 12 (TDRD12), mRNA. 0.0 1.105e+04 99.61 0.917375093214019 XM_005275844.1 LOC101929327 PREDICTED: Homo sapiens tudor domain-containing protein 12-like (LOC101929327), mRNA. 0.0 1948 85.61 0.251304996271439 TCONS_00083295_8 sp|Q587J7|TDR12_HUMAN TDR12_HUMAN Tudor domain-containing protein 12; 0.0 1924 80.69 0.870942812982998 2 coding 0 0 0 0 -0.0802108726548669 0.579726950481777 -0.0227646896650462 0.620253702767268 ATGGCGATTGAAGATCCAGGTTGCTTCTGGGTTGTTATAAAAGGGTGTAGTCCCTTTTTAGATCATGAAGTTGACTATCAAAAACTAAATAGTGCCATGAATGACTTCTATAACAGCCTGTGTCAAGATATAGAAATAAAACCACTGAAGTTGGAAGAAGGGCAGGTTTGTGTGGTTTATTGTCAGGAACTAAAGTGCTGGTGCAGGGCAGTTATTAAGTCAATCGTGTCTTCAGCAGACCATTACCTCGCAGAGTGTTTCCTTGTGGATTTTGCCAGATACATTCCAGTGAAATCCAGAAACATCCGAGTTGCCATAGAAACTTTTATGCAGCTTCCCTACAGAGCAAAAAAATTCAGACTGTACTGCACAAAACCTGTCACATTGCACATTAACTTCTGTGAAGACAGTGCTGAAATTGTACGGGCCAAGAAGTGGGACAGTGCAGCTATTCAGTACTTCCAGAACATCCTGAAAGCGACTACCCAGGTAGAAGCCAAATTGTGTGCTGTGGAAGAAGATACTTTTGAGGTTTACCTTTATGTAACTCTGAAAAATGAAAAGGTTTGTGTTAACGATGATCTGGTTGCAAAGAACTTCGCTTGTTATGTGTCACCCATGGAGAATAAAAACTTTGATTCTTTGGAGAAGCCAAGATTGAATATAAAGTCAGCATCCTTTTCCAGTAAGCTCAATCCAGCACTTACTCTTTGGCCAATGTTTTTGCAAGGAAAGGATTCTCAAAGGATGGAAACAAAGTCTCTCAAGCATCCGTGGCCCCAGGGTGCAGGTGACTTCAGGCCAACCAGTAGGCTCCTGGAGAAGACTGTAAAATGTAATATGGATTCATTGAAAGGTTCACCTAAAAAAGAATCTGAAAAGAAACAACAGTACATCTCCTTGAAAGATGTAAATAAGTGTGTTGAATCTTCAGTGTGCTGGCCAACAAAGAGAGGCATAACCATATATGCCAATCCAGACACACCAGCTGCAAGTGCTTCATGTCAGAAGTCAAGTGAGAAGCCACTTAGATCAGCTGAGAAGAAAGAATACAATGAGAAGAATGGCTGTGTGAAATTACTGCAGTTTTTAAATCCTGATCCTTTGAGAGCTGATGGAATCTCTGATTTACAGCAGTTGCAGAAGCTGAAGTCGGGGTCCCGGCAGCCCATGGCAGTTTTGCGAAACAAGATTGAGCCCTGCTTGTCCATCGAGACAGCACCACTCTCAACAGACCTGAAAAAGGCTCTTCAGAGAAATAAGTTTCCAGGCCCCAGCCACACTGAGTCTTACTCCTGGCCTCCCATAGCGCGGGGCTGCGACGTGGTGGTCATTTCTCACTGCGGAAATGACCCTTCGTTGTACCTCCCACCAGTGCTCACGATTCTGCAAACCGGGGGCTGCTACAAGTCGTTGCCAAGTAGGAACGGACCTCTGGCAGTCATCGTGTGCCCTGGGTGGAAAAAGGCCCAATTTATTTTTGAATTATTGGGAGACTATAGCGCGTCCTGCAGACCTCTTCATCCTGTGTTGTTAACAATCGGACTGCACAAAGATGAAGCCAAAAATATGAAGCTTCCAAGGGGATGCAATGTGGTTGTCACAACACCACATAGTCTCCTGAGACTTCTCCAGTATCAAAGCTTATTGTTTCTTAGACTCTGTCACCTACTTTTGGATGAGGTGGAAGTGTTACTGTCTGAGGCTAATGAGCAAATGTTTGCTATATTAGATAACTTTAAAAAACACATGGAAGTTGAAGAAAGGGAATCTGCCCCACATCAGATTGTTGCAGTTGGAGTTCACTGGAACAGACATATAGAGCATTTAATCAAAGAGTTCATGAACGACCCCTACATTGTGATCACGGCCATGGAAGAGGCTGCCCTCTATGGCTGCGTCCAACAGGTCGTACATCTTTGCTTGGAATGTGAAAAAACTTCTACTTTACTCCAGACTCTTGACTTCACCCCAAGCCAGGCACAGAAGACCTTGATCTTCACCTGTTCCGCAGCTGAGACAGAAACAGTGTGTAAGGTGGTAGAAAGCAATTCCATATTTTGCTTGAAAATGCATAAAGAAATGATTTTTAATTTAAAAAGTGTTTCACAACAATGGAAGAAGAAGTTAAGTTCTGGTTCTCACATTGTATTAGCCCTCACAGATGACTGCATCCCACTCCTGGCCATCACCGACGCCACGTGTATCATTCACTTCAGTTTTCCTTCCTCTCCAAAAGTCTTCGGTGGACGCCTATATTGCATGTCCGATCATTTTCAGAGTTTAACTGAACAGGGTTCTGCAGAACAGGGAGATAAAAAGACCAAATCTGTCTTGCTGCTGTCGGAGAGAAATGCCTGCCACGCAGTTGGTGTCCTGCGCTACTTGGAGCGAGCAGATGCCAAGATCCCGTCAGAGCTGTACGAGTTTACGGCGGGGGTTCTGGAAGCCAAAGAAGATGGAAAAGTCAGAAGGCCTCTTTGTCCGTATCTTAAGGCTTTTGGTTTTTGCAAAGACAGAAGGATCTGTCCTGACCGGCACCGTGTTAATCCAGAAGTAGACATACCAAGGAAGTTATCCAGCCAAACTCTACCGGTGCTTGGATACATAAAAATAATACCCTTTTATGTTTTGAATGCAACAAATTACTTTGGTCGTATAGTTGATAAACATGAGGATCTTTGTGCAACTCTTAATGCTGAGATGAAAGAGTATTTTGAAGACTCCAGTAATAAAGCAACTGTTGAAAAGATAGAGAAATTTGGATTATATGGGTTAGCAGAAAAATCAGTTTTTCACAGGGTTCAGGTGTTGGAGATGCGCCAGAAGGAGGACACGTGGGCCCTGGATCATGTCCTTGTGAAATTCATAGATGAAGGCAGGACTGGACTCGTCACAAGAGACCAGTTGCTGCACCTCCCAGAGAGTTTCCACACACTGCCCCCGCAAGCTGTGGAGTTTATCGTTTGTAGAGTGAAACCCGCGGACAATGAAATTGAATGGAATCCAAAGGTTACTAGGTACATTCATCATAAAATCATTGGAAAACTGCATGATGCAAAAGTGATACTGGCTTTAGGAGATACAGTTTGGATTGATCCAATGGTGCACATTACAAAACTTTCAAACTTGAAAACTTCTGTCATTGATTATAATGTTCGAGCTGAAATTTTGTCAATGGGAATGGGCATTGATAACTCAGAACATGTAGAACAACTGAAAAAATTATACAAAGGAGCTAAAATGCCATCTTTTGAAGAAAGCCTGAACCAGACCCTGGTACCTTCTTCCAGAGAAGACAGTGCTTGTCTGCCGAGCACACAGCAAGAGGACAAGGGCTCAGAGAGAGGAACTGACACCAAGACAAACTCAGAAAACCAAAAGCATGAAACTTTACCTAAAAACACTGGAGGTGCTTCCATTAACAAAACTGCAGAGCCGCCGAAAAGCTTCCACCCACAAATAAAATGGTTCCAAAAAGAGGATGTGGTCATACTGAAGATAAAAATAAGGAACGTAAAAGATTATAAATGTAAATACTTTAGAGATAGAGTTGTTTTCAGTGCCTGGGTAGGAGAGAAATTTTACTTGGCTGATTTGGAGCTACAAGCCAACATAATAAAAGATGATTGCAAATGCATAATTAAATATGACGAACCTGTAATCACTCTTGTAAAAGAGCAAAGGGAGTCTTGGTGTGGCTTACTCAAACAGAGGAATCCCAATGTGGCTTTTGATTTTGATCACTGGGAAGACTGTGATGAGGATAAGGAGGATAGCCACTTTGCCAAAGTTGTAAACTCTAAAAACCTGTCCTGCAATGTGGCAGGCTTGGTTGAGACCAGTGACAAAAGTTCGGATGAAGATGAAAGTGAGAGTGAATGAGAATGTGAATTAAACCCTGCAGAGCGGCCAGAGGCTTCTGAACAGAAATGGATATTGCTGTGTGACCAGAGCTAAGAAGACAGGCAGTCACATTCAGACCATTTTTCCCTCAAGGATCAAGCGTTACTAAGTGTCACCTTGCGGCACTGGGATTAGTAATGGTGAGAAATTCTTAATTGATAGAAACACGAGTTGATGATGAGACTCTGGAAGGAAGGTGGAAGCAGAGACACTGTGAGTGCTGGGCTGTCCTGCTGGCCACCTGCTGTGAAGCCTGCCTTGACTCTCAGGTTGAGTGATGCAAGCCAGGCGTTCAGGTAACGAACTGTACCACCTGAGTTCACTGTTGTTGTCTTTTCATCTAGACCTGTGTTTGGTACATTCTTAAAACCTGAGCTTGCACATATAAATTGAGATTTCTTAAAATTCATACTCTGCACTGCTTAAGAAACCTTTTCAACGGCTTCCCTGGTAGCTCAGATAGTTAAGAATCTGCCTGCAGTGCAGGAGACCTGGGTTTGATCTCTGGGTCGGGAAGATCCCCTGGAGAAGGAATTGGCAACCCACTCCAGTATTCTTGCCTTAGTTCCATGGGCAGAGGACCCTGGCAGGCTACAGTCCATGGGGTCGCAAAGAGTCAGACATGACTGAGCAACTAACGCTTGACTTCACTTTCAGCCATGAGTTAGTTGGCATTCAGCATAACTGTGTGTGTGCTAATGCTCCTCGTAGTCTTTGCATAGCGATAGCTGATTGGCCAGGCTAAGCTGACATCTTGCAAAGAGACAGTCCAAGGGTGAGAATGGGCTTGCCTCAGCAATAGCAGCCTGAGCCAGGGCCTTCTGGAGGTAAAGCTTCTGAAGTACCCTCGGAACCTGCAGCGTCTGGGACAGACAGGACACAGGTCTCTCTCCAGTGGAAACTGAAGAGGACTTGTGCGTGGAGGTAACGCTCAGAATACCTGCTCATGGTGAGCCCTGCACACATTCATGGCCTCAGCCTGCGGCGAAGCTGCAGCACCCGCAGTCATGAGGTCATCAGGAAATGTGCATTTGTCATGAGCACTTCAATGTGGGACTGCCCAGAGCCTGGCTCTCCATGTTACCCGGAAAGTTAGACGGCGAGCCGCTGGCCAGTTCACACCCTGTGCACTGCCTCAGTGTGGGGCTGGCAGCTTTGCCTAGAACTGGAAAATAACACGGTAGAACATGACTGTTAGGACAGCCCCCCGAGTCTTTATTCTGTTTTACACATCAGAAAGCACAGGGGCTCACGTTTGTATGTGTCCCAGGTATGGAGCACCACCTGAACAGGAGTAAACTTTGTCTTCAAGCTGTCGTGCCCCGTGAGCAGGCACGAACCGTCCTCTTGCTCTCAGTTTCCTCATCTGTAAAATAAGACAGTCTGCTTCTTGGTGGCCATTGCCCAGCAGTGGGGCCTGGCGTGCTGCTGGGTGGAGTCATGCTGCTGCCCTCTGGGGGGCGGACATGGTGTCCAGCCTGGACAGCTGCCAGGATCGCATCCTTGCTGCCGCTGTGAGCCCGTGGTTGACCGGCAGGTGTCCGATTGGCATGTGAAGTGTACCAGCGGTCCTTTTTTCCCGGCTAAACTGGGCAGGCTCTTCGGGAAGTTGTGCTGTCTTTGCTGGCAGAGGTTCTGATTCTGTGCAGCTCTTGTAACGTTCTTATCCCATTTTGGTAAATACAGCTTTCGCTCCCACCGGGGAGGCCTTTGGGTCGGTGGCCAGGCCTCCTGAGCTGCACTGGCTTTTCCCCTGAGGTTGTTGGCCACCTGCAGTGTATGCGCCAGTGTATAGTCTCTTTCATAAAACACAACACATGATAATAGCAAGCAGCAGAGCTGCACAGGTGTGTGCCCAGGTCAAGTGAAGGGGTTTCCTGTTCTCAGAGAAGATGTAACATTGGTTCTCTCGTGTGGTTCACTAACAGCTGAGTGAAAGTATTGGGCAGAGGATGGCTACATGTTTAAATTTCAATTTCTTTTTTCAGACATTTAAATTTATGACTATTTGAAGTTCTGAATTATGTTCTGTAAGATACAGGAGTACTGGCTTGTGAGATGTAAACAATTACTCACTGTTTTTTGTTGTTGTTGTTCTCTATTATTATATGTACTGATTTCATGTTTTGGGAAATTTTTTGAAATGCATGGTAAAAGTACCTTTGCATGCTTCTAAAATTGCTCATGTTCTTAGTTTTGGTGTGAAAGTCTTTTGCAATATATCAATAAAATTTCAGTGTTTTCACGGAAATGTTACTTTTCCCATTCTTTTAGACCATATTTTGTCAGGAATATTCCTGAGTGCCAAATGCAATAGAATTTTATACAGCATACGTCCTGGCTTGACTAAAATACCAGTGAAGGTTGTCAGGGGACCTGTGATGCTGAGCTTCTGTGGACACAGGCTGCAGGTGGTCCTGGGCAGTCAGCTGTGCCCTGAAGGCCTTGACAGCCAGCCTGGGACGGACCTGCCCCCTGCGCCCCCGGTGAAAGACAGGAAGGGGTGGGGCGGGTAGGAAAGCACTCGTACTTGAGTATTTTAAAAATCTATTTCAATCAAAGCAAAGTTCCATCAATTTTATATTTAAATGTATATATGTGTGTGTGTGTATATACACATATACGTGTGTGTGTGTGTATACATATATGTACCCTTCTGATGATGGAGCTGAAAGAACACCCTTTACTGAAGTAGGTGTGACGTGCCCCTTGCTAGAGTCGCTGTGTGGTGCCCGTGGCTCTGGTTTAGTCCTTCCCGCCACCACCGTCCTTCTGGGTTATGTCCTTGCCTGCTGGTTT EMBV3_33692 ACTTGTTCTGCCATCTACATGGGAGTTGATGAAACTCAATGGTAACTCATGATTCAGGAC Gene GeneID:510080|ANTXR2:NM_001076826:35_cdna Constitutive 2 NULL GeneID:510080 6 GENE ANTXR2 MGC143297 anthrax toxin receptor 2 EMBV3_07158 TTATGACGTCTACCGCAGAAAAGCCTCAGAAAGACAGTATCAGAGAAGGCTGCAAGATGC Gene GeneID:782900|LOC782900:XM_002697019:435_cdna Constitutive 0 NULL GeneID:782900 22 GENE LOC782900 NULL similar to LOC440957 protein EMBV3_00457 CTTTTCCAAGATCCCACAAGCCCATGCCCTGCAACTGGAGAAACCCATATGCCTCAGCAA Gene GeneID:522372|SYF2:XM_002685769:573_cdna UTR3_Alt 2 NULL GeneID:522372 2 GENE SYF2 NULL SYF2 homolog, RNA splicing factor (S. cerevisiae) EMBV3_23319 TCAACTTGGTCTCCTATTTTTAATAACTATCAAAAAACATTTGTGTACACTTGTTGACTC Gene GeneID:510267|TMPO:NM_001098005:977_cdna Constitutive 3 NULL GeneID:510267 5 GENE TMPO LAP2beta thymopoietin EMBV3_12911 TGGGCCAGAGGAATAGTATCTCTTGACTCCCCAATTCTCATTACTCAAACCAACCATGAG Gene BVT0102_371146 + 0 NULL GK000021.2:25255006-25317645 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118897 1 XLOC_072760 Coding TCONS_00118897 XLOC_072760 Coding Coding BNC1 21:25237607-25256312 = TSS89178 4596 1 TCONS_00118897_3 1010 6 0.754597946963216 0.00019393450703798 6.03615879697936e-05 0.000118335243198665 0.000485618677630071 0.000137183038420635 5.43052930532664e-05 0.000148000466605565 0.000419458706639769 0.000366107049411201 3.42721526445906e-05 2.1915594869142e-05 3.25805295961077e-18 0.000285591303379389 0.000122980034428578 0.000401776101828709 1.14933031540893e-05 0.000270924891023279 0 0.000207799967365735 0.000861217303747353 4.54498421086259e-06 1.3125814253694e-16 0 0 0.000695671810613351 0.000292737572352592 0.000193083527202273 2.7718364530222e-16 7.41626506590727e-11 1.71838139849698e-05 XM_003583736.2 BNC1 PREDICTED: Bos taurus basonuclin 1 (BNC1), mRNA. 0.0 8251 100.00 0.995213228894691 NM_001717.3 BNC1 Homo sapiens basonuclin 1 (BNC1), mRNA. 0.0 3903 79.61 0.965404699738903 TCONS_00118897_3 sp|Q01954|BNC1_HUMAN BNC1_HUMAN Zinc finger protein basonuclin-1; 0.0 1571 83.58 0.95049504950495 2 coding 0 0 0 0 0.0507991620752114 0.732685188420635 -0.00456149954097563 0.924743767626379 ATGTGCCCATTCCGGCTGCTGCTAGGAACTGCAGTCAGCCTTTCTGACAGGAGGCCCATGGCAGCATCTAGCCATGCTCAAGAATGTGGTAAACATCTGCTTTATGTTTCTGAAGAATGGAACGAGTATCAGAATTCTAAAAGAAAGGATGCTATCGGCTGTACTCTGAACTGCAGCTGCCAAAGCTTCAAACCAGGGAAGATCAACCACCGTCAGTGTGAGCAGTGCAGACATGGATGGGTGGCTCACGCTCTGAGTAAGCTGAGGATCCCCGCCATGTACCCCACAAGCCAGGTGGAAATCGTCCAGTCCAACGTGGTGTTCGACATCAGCAGCCTTATGCTCTATGGGACCCAGGCCATCCCTGTCCGCCTGAAGATCCTTCTGGACCGGCTCTTCAGTGTGCTGAAGCAAGACGAAGTCCTCCAGATCCTGCACGCTTTGGACTGGACCCTCCAGGATTACATCCGAGGATATGTGCTACAGGATGCATCGGGAAAAGTGCTGGATCACTGGAGCATCATGACCAGTGAGGAGGAGGTGGCCACCTTACAGCAGTTCCTTCGTTTTGGAGAGACCAAGTCCATAGTTGAGCTCATGGCAATTCAGGAGAAAGAAGAGCAGTCTGTTGTCATCCCACCTTCCACGGCCAACGTTGACATCAGGGCTTTCATCGAGAGCTGCAGCCATCGGAGTGCCAGCCTCCCCACTCCCGTGGACAAAGGAAACCCCAGCAGCGTGCACCCCTTCGAGAACCTCATAAACAACATGACCTTCATGCTGCCTTTCCAGTTCTTCAACCCCTTGCCCCCAGCACTGATAGGGTCACTGCCCGACCCCTATGTGCTGGAGCAGAGTCAAGACCAAAGCCAGGACCCCAAACAGGAAGTCCATGGAGCCTTCCCTGACAGCAGCTTCCTCACTTCCAGTTCTACCCCATTTCAGGTTGAAAAAGATCCGTGTCTCAACTGTCCCAATGCTGTCACCAAAAAGGAAGACAGCACCCACTTCAGCGACTCCAGCTCATACAGCATCGTCACGAAGCTCGAAAGGACACAGCTGTCCCCAGAGGCCAAAGTGAAGCCCGAGAGGAACAGCCTGGGTGCAAAGAAGGGCCGGGTGTTCTGTACAGCATGTGAGAAGACCTTCTACGACAAGGGCACGCTGAAGATCCACTACAACGCCGTCCATCTGAAGATCAAGCACAAGTGCACCATCGAAGGCTGCAACATGGTGTTCAGCTCCCTGAGGAGCCGCAACCGCCACAGCGCCAACCCCAACCCCCGGCTGCACATGCCCATGAACAGAAACAACAGGGACAAAGACCTGAGGAGCGGCCTGACACTGGCTGCCTCGGAGAGCGCCAAGCGCCCAGGCCTCGGGGTGACTCCTCCAGACTGCCGGCCTCTCCCTGGCTACGCTGGGGCAGTGGAAGACTCCCGGAGCCAGCCAACCTTCCCGAGCCTCAGCCACAACGGGGTGCTCTTCCCCAACCTGAAGACTGTCCAGCCAGTCCTGCCTTTCTACCGCAGCCCAGCCACTCCTGCCGAGCTGGCCAACACCCCTGGGATGCTGCCCTCCCTCCCTCTGCTGTCCTCATCCATCCCGGAACAGCTGGCTTCGAACGAAATGCCGTTTGACACCCTGCCCAAGAAGAAATCCCGCAAGTCCAGTATGCCCATCAAAATAGAGAAGGAGACCATGGAGACAGCAGATGAGAAGAGGCAGCCTCTGAGCTCTGACGAAGACATGCCCCTGCAGGTGGTCAGCGAAGACGATCTGGAGACCTGCAGCCCCAGGTCAGACGGAGCCCCAGAGGAGCTACACACGCCAGCAGGAAGCTCCGAGAGGCCTCGCCTTGAGGAAGAGAGTCCCTGCTATCTCGGGCCAGGAGTTGAGTCCAGTGGAGCCATCCGCCAGACTCCTGAGCAGGCCATGCACAACTCAGAGAGGGAGACTGGGCAGAAGTCAGTGTTGAACACCGTGCCACGGGACGCAGAGGAGGATGGCCGTGAACCTCACCTCACAACCAGGGTGGAGCCCTGCGTGCCTTTTCCCGACTATATCAAACTGCAGCAGCACCTGCTGGCCGGGGGGCTCTTTGGTGCCTTGTCCACCCAAGGAATGGCTTTTCCTTGTTTTGAAGATTCCAAAGAGCCGGAGCACTTGGGTCAGCCGGCATCAGTGAGGTCAAAGGAGGAGAATCGCTTCCAATGTGACATCTGCAAGAAGACCTTTAAAAACGCTTGCGGCGTGAAGATGCATCAGAAGAACATGCACTCCCGGGAGATGCACACGTGCACAGTGGAGGGCTGCAAGGCCAGCTTCCCGTCCCGCAGGAGCAGAGACAGACACAGTTCAAACCTAAACCTCCACCAGAAAGTATTGCCCCAAGAAGCGCTGGAGAGCGGTGAAGACCCCTTCCGGGCAGCTTACCTCCTGAAAGATACAGCCCAGGAGGCGTACCAGGAGGCAGCCTTCACACCGCAAGCCTCCCAGACGTCTGTCATCTTCAAGGGGATGAGCCGGATGGGCAGTCTGGTGTACCCACTAGCCCAGGTCCGCAGTGCCGGCCTACAGAGCTATGCCTCTGGTCTGCCTAGCGAGGGCACTGTCTTGGATCTGAGCACTACCTCGAGCGTGAAGTCGGAGAGCAGCAGCCACTCCTCCTGGGACTCAGACGGGGCCAGCGAGGAGGGCGCTGTGCTCACGGAGGACTGCGACGGGACCTGTGATGGGCCAGGCCTGGTGCCTGGGGAGGACTACCCACTCTGTGTCCTGATGGGGAAGGCTGACCAGAGCCTCGCCAGCTTGCCTTCCGGGCTGCCCCTGACGTGTCACCTCTGTCAGAAGACATACAGCAATAAGGGGACCTTCCGGGCCCACTACAAGACCGTGCACCTCCGCCAGCTGCACAAATGCAAGGTCCCCGGCTGCAACACCATGTTCTCATCTGTCCGCAGTAGGAACAGACACAGCCAGAACCCCAACCTGCACAGAAGCCTCACCTCCTCTCCTAGTCACCTGCGGTAACAAGACGGCAGACCACTTGGCTTGAATAAGCACTGGTCGGAATTCAGGAATAAGGTAGTCCAAAGGAAAGTTTCTCACTCTGTTTAATACCATTTGGGGCAAGCAAGGCAAAGAGTGTGTGGGTTGACTTCATAGTCTTCAAGAGCAGGATGAGCAGAAGAGAGGCCTTGTGAGAAGCTGTCATAGGGGCAGTGTTTCCTGTTATCTTTCTCAGCCCAAGAAGTTTTTCGCTGACAGCAAACACTTGCAGAAATGCGGTTTTCCCAGATTTGTTTACACACTACCTGGGAGAGTGCCAGGTCTGTGTCTTGACCACAGGGGCCCAGGACCCGGAGGGGAGCTGGAAGGGAGGTTGTAGTATTAAGGGTCAATGAAGTGTCCTGAGGACACAGACTGTCACCACAGGTGACACCAGGAGCCAGTCCCAAAGATCACATTTTTTGAGTTCCTGCCTTAATGAGTCTGAAATCCAAACTGGAGTTTGGGAAAATGACTGAGACTCCCTCCATTTAGATTGGAGAATTACTTTCTTCCCCCTATAGGTCTCACGTGTTACTCCAGGGAGTTCTCAGAGAAAGAGGGTTGGCCTCTTAACATGTAGGAACATGGATGTTTCCTGGGATATTAGTTCTTGCTCCATAACACACGTTCAGGAAGCTAGCGGGGAGTACTTCATGCACTTAAAAATAGTGGTCTTCAATTTAATTTAAAATAAGTTTGATAGTATTTAATTTGTGTTTATGTTATATGAGTATTTGGGATGAGTGCAGACATGTCACAGTGTGACCTTTGAGTCTCTGCTCCGAAGCAGAGAGAGTGACAGCCTAAAATTCAAATCACTGCCTGTTTTTGCTTGGTGAACTCCGGAATCTTCATTTAGAGCCCCCATGGAACGAATGCAGGCATGATGCTGGCAGGACCATTTGTATATAATCAGCCAAAGCATTTAGAGAATGTGGTTCTGACAGTTGTTGTGTATTTTCAGTATCACTGGATCCCTCAGTCTTCACCCTTTTACAGATGTGTAAGATTAGGATGAACTTTCAAATTTACGTGGTAGAAAGAAAAGTAGGACATTATTGCCATACTGTATGTCTTAATATTTAACTTATTCTGAAATATATTCTGTACCATTATACATGTTTGCTGTTGTAGAAAAGAAGCTTAACAGTTCCTGTGAAAGGAGACCATCTCCTGAAATTCGGCATTTGCCCTAAAAGCCCATGGTTGCAAAAAAGAAATTGATTTTGTATTAAACTTTCAAGTTAATCACTTTTTAAACTCATGGTTGGTTTGAGTAATGAGAATTGGGGAGTCAAGAGATACTATTCCTCTGGCCCAAAGGTGAAAAAAAGCCAATAATGTGTTAATGATTATTTCAACATTTAAAAAAAATAAATAAATGTGACAACTTAAACTTTGTCTCTGCTTAAAGTGAGATGTATCTTTGAAATGTTTTGTTACACAGGTGTTTCATATTCCAATGTCCCCAGAATGGAAAAATTTGTATACAAATGAGTTTTCTATGATTTAATAAAAATATATGGCACACTTTTTGTTTAA EMBV3_12751 CTGGTAACAGCTTCAAAGGACAGAGATGTTAAACTGTGGGAGAGACCCAGTATGCGGCTG Gene BVV0101_014905 + 0 NULL GK000010.2:26738306-26799838 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013258 TCONS_00013260 TCONS_00013259 TCONS_00013261 1 XLOC_008047 Coding TCONS_00013261 XLOC_008047 Coding Coding TEP1 10:26750845-26784292 = TSS9869 7991 1 TCONS_00013261_15 2626 54 0.762692100699635 1.19037683483051e-05 3.64559226905685e-05 2.59096801058113e-05 0 1.42051123495049e-05 0 1.77907114681377e-05 3.21099907591961e-05 9.07427526281047e-08 1.40959067295076e-05 1.22862946504414e-06 2.37985909047403e-06 2.35119298628639e-07 4.31657108506907e-06 2.6371877660555e-06 0.000585307604688576 0.000281297076641627 0.0019300774445777 1.28884569760528e-05 5.89425491979936e-07 2.48814671613499e-07 1.72278157235468e-27 2.05929312431967e-21 0.000255945970688695 2.14737335969646e-06 1.00032110715186e-05 3.18082707052549e-05 9.22757498933501e-09 3.03702481928996e-05 5.45711794188256e-08 XM_005211468.1 TEP1 PREDICTED: Bos taurus telomerase-associated protein 1 (TEP1), 0.0 1.441e+04 100.00 0.999874859216619 XM_005268027.1 TEP1 PREDICTED: Homo sapiens telomerase-associated protein 1 (TEP1), 0.0 8691 84.19 0.992741834563884 TCONS_00013261_15 sp|Q99973|TEP1_HUMAN TEP1_HUMAN Telomerase protein component 1; 0.0 4166 79.66 0.999238385376999 0 coding 0 1 1 1 0.0838709307019662 0.549318349304246 0.0556334742973037 0.348939376621611 ATGTTGGAGAAACCACCTGGGCATGTGTCTACTCACTCAGACATCCTCTCCTTGGAGAACCGGTGCCTGGCCACCCTTCCTGACCTGAAGACCTTGGAGAAACCACCTGGGCATATGTCTGCCCACTCAGACATCCTCTCCTCGGAGAACCGGTGCCTGGCCACCCTTCCTGACCTGAAGACCTTGGAGAAGCCACCCGGGCATGTGTCTGCCCACTCAGACATCCTCTCCTTGGAGAACCGGTGCCTGGCCACCCTTCCTGACCTGAAGACCTTGGAGAAGCCACCCGGGCATGTGTCTGCCCACTCAGACATCCTCTCCTTGGAGAATCGGTGCCTGGCCACACTCACCATTTTAAAGAGCACTGTGTCAATCAGCCCCTTGCTCCAGAATCTCCAGATATCTCACTTGGCTCAAGCTGATCTGTGCAGCTTGAACAGCAGCAACCACCTGCTTTCTGAGCATCCAGCCTCAAGGGTGCAGTACCTCTCTGAGGGACGAGGCCTTCTGACCTGCCCCAGGGTCTCGAAAACCATCTCTGCCCCAGAGAGAGTTCAGGAAGCAGTTCTGGGTCGATGGTCATCTTCAGGAGAGAAAAAGCCAGAAGAGAAGGAATGGGCAGAGGCTCAAATGCCTTTTTATAGACTAAGCTTGGGAGAGGAGGAGGAGGTGGAGGAGCTGGCCTTGAAGCTCACCCCTGGGGACTCTGAATCTCATCCTGAGCCTACTGAACAAGTCCTTCAGGAAGTGAAGATGGTTCTCATGAGCTTTCTGTGTTCATCGCTGGTGGCAAATGTAAACAGAAATGATGCAGCGTACTCTACCCAGGCTTTCCTCCTCAAAGTCTGTAGCGAAGTTGCCCGCTTTGAGCCTGAATTTGTCCTCAAGGCATCTCTGTACACCAGGCAGCAGCTGAATGTCCGGGATGTGGCCAACAAAGTCTTGGCCATTGCTGCCTTCCTGCCACTCTGCCGCCCCTACCTGCGACGGTACTTCTGTGCCATCGTCCAGTTGCCTTCCGATTGGATCCAGGTAGCCAGGTTCTACGAGCTCCTGTGCAGAGAACAGGAAGACTGTCTCGCACCCCTGCCTGCCTGCCTGCGTGCTGCGATGAGGGACAAATTTTCCCAGTTTGATGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGCGGCGCCCCCGACGGCCACCCCGCCCGCCAGAACATACATTTTCTGAGACACAGACGTATTTGCCAAGGTTCATTTGGCATATTCGAGGTGAACAGAGGATGTTTGAGACAACCTACGGTTCAGTGTCAGAGAAAAAGACTGAGCAAAGGTTCACCCTGAAGAAGTTGGTACGGAGACTGCACATCCATGAGCCTGCACAGCTTGTCCAGGCCCTGCTGGGCTGCAGATACCCCTCCAACCTACAGGCCTTTTCTCGAAGCCGCCTCCCAGGGCCCTGGGATTCTAGCAGAGCCGGGAAGCGGATGAAGCTCGCTCGACCAGAGACCTGGGAGCGGGAGCTGAGCTTACGGGGAAACAAGGCCACCGTCTGGGAGGAACTCATCGACAGTGGGAAACTCCCCTTCATGGCCATGCTTCGGAACCTACGTAACCTGCTGCGGGTTGGAATCAGCGCCCGTCACCACGAGCTTGTGCTCCAGAGACTCCAGCATGCTAAGACAGTGATCCACAGTCGGCAGTTTCCATTCAGATTCCTTAATGCTCATGATTCCATCAATGACCTTGAGGCTCAACTCGAAAAGAAAGAGTTGCCATTTCCTTCCAACACACAACTGATAAAGCAGATAATAATCAAAAACACAAAATATGGCAAGAAGCATGCCTATTCCTGGCAGTTTCGCCAACCAAGCCGTCGGGAACTTCGGACAGCAATGATGATCCCTGTGATATATGAACAGCTCAAGCGGAAGAAGATGAAAATACACAAGGCCAGACAGTGGAAATGTGACCGTGAGATGCTGGCTCGGTATCGACAGGCCCTGGAGACAGCTGTGAACCTCTCTGTCAAACACAGCCTGCCCCCACTGCCAGGCCGCACCCTCCTGGTCTATCTGACAGATGCCAGTGCAGACAGAATCCTTCCCAAGAGCAACCCACAAGGGCCCCCTCTGAACTATGTGCTGCTGTTGATTGCCATGATGATGGTACGGACGGAGCAGGTGGAGCTTTTGCTGTGTGGAGGGGGCATTGTGAAGACTGCTGTGATTAAGGCAGAGGAAGGCATCCTGAAAACTGCCACCGAACTCCAAGCTCAAGTCCAGAAGTCAGATGAAAGCTGTGAACAGTCCCTGACTACTCTGGGGAAGCACTTGCTGTCTCTGGCTACCCAAAGGGTCCCTGTGGACAGGGTCATTGTCTTTGGCCAGACTACAAATGAGAAACTGATAAATGCAGCCAAACAGCTCTTCTGGCAGCATGTGAATCCCAAGTGCCTCTTTGTTGGTGTTCTCCTAAGGGCAAGTTACCTATGTACCGATTTGAATCCCAATGATGTGACACTCTCAGGCTGTACTGATGGGATACTGAAGTTCATTGCAGAGCGTGGGGCCTCCCGGCTTCTAGAACATGTAGGCCAAATGGACAAAATATTCAAGATTCCACCACCCCCAGGGAAAACAGGGGTCCAGTCTCTCCGGCCACTGGAAGAGAATACTCCAAGCCCCTTGGCTCCTGTTTCCCAGCTTGGATGGCGAAGCATCCGGCTTTTCATTTCCTCCACTTTCCGGGACATGCATGGGGAGCGGGACCTGCTGCTGAGGTCCCTGCTGCCAGCACTGCAAGCCCGAGTGGCCCCCTACCGCATCAGCCTTCATGCCATCGACCTGCGCTGGGGCATCACTGAGGAGGAGACCCGTCAGAACAGACAGCTGGAAGTGTGCCTCGGGGAGGTGGAGAACTCGCAGCTGTTTGTGGGGATCCTGGGCTCCCGCTATGGCTATGTTCCCCCCAACTACAGCCTCCCTGACCATCCTCACTTCTGCTGGGCCCAGCAGTACCCTGCAGGTCGCTCTGTGACAGAGATGGAGGTGATGCAGTTCCTGAATCGGGGCCTCCGTCTGCAGCCTTCTGCTCAGCCTCTCCTCTACTTCCGGGATTCTAGCTTCCTCAGCTCTGTGCCAGATGCCTGGAAATCAGACTTTATTTCTGAATCTGAAGAGGCTGCCCATCGGATCTCAGAACTGAAGAGCTATCTGAGCAGACAAGAAGGAATCACCTGTCGCAGATACCGCTGTGAGTGGGGCGGTGTGGCAGCTGGCCGGCCCTATGTCGGGGGGCTGGAGGAGTTTGGGCAGCTGGTTCTGCAGGATGTGTGGAGTATGATCCAGAAGCTTTACCTCCAGCCTGGGGCCCAGCCGGAGCAGCCAGTGCCCATCCCAGATGATGACTTGGTCCAGGCCACCTTTCAGCAGCTAAAGAAGCCGCGGAGTCCTGCCCGACCACGCCTTCTTCAGGACACAGTGCGGCAGCTCATGCAGCACCAGGGGAGGCTGAGCCTGGTGACCGGGCAGTCAGGACAGGGCAAGACCGCCTTCCTGGCATCCCTTGTGTCAGCCCTGCAGGCTCCGGATGGGGCCACGGTGGCCCCCTTAGTCTTCTTCCACTTTTCAGGGGCCCGCCCTGACCACAGTCTTGCCCTCACCCTGCTCAGACGCCTCTGTGCCTATCTGCATAGCCAACTGGAGGAGCCAAGTGCCCTCCCCAGCACCTACCGGGGCCTGGTGTGGGAGCTGCAGCAGAGGCTACTGCCCAAGTCTGCTCAGTCCCTGAGAACTGGCCAGCCTCTGGTGCTGATCGTCGATGGGGCTGACAGGTTGGTGGACCAGCGTGGGCAGCTGATCTCGGACTGGATCCCAAAGATCCTTCCCCGGTGGGTGCACCTAGTGCTGAGCGTGTCCAGTGATTCTGGCCTAGGGGAGACCCTTGAGCAGAGGCAAGGTGCCCACGTGGTGGCCCTGGGGCCTCTGGAGCCATCTGCCCGGGCCCAGCTGGTGCGAGAAGAACTGGCCCTGTATGGGAAGCGGCTGGAGGAGTCACCGTTTAACAACCAGATGCGGCTGCTGCTGGTGAAGCGGGGGTCAGTGCTGCCGCTCTACTTGCGCTTGGTCACCGATCACCTGAGGCTCTTCACGCTCTACGAGCAGGTTTCCGAAAGGCTCCAGACGCTGCCGGCCACCGTCCCCCTGCTGCTGCAGCACGTCCTGGGCACCTTGGAGCAGGAGCATGGCCCCGACGTCCTTCCCCAAGCCTTGGCCACTCTTGAAGCCACACGCAGCGGTCTGACCGTGGACCAGTTGCATGGAGTGTTGAGTGCATGGCGGATTCTTCCCAGGGGGAGCAAGAGCTGGGAAGAAGCAGTGGCTGCTGGTAACAGTGGGGACCCCTACCCCATGGGCCAATTTGCCTACCTCGTCCAGAGTCTGCGCAGTTTGCTAGGGGAGGGACCCCTGGAGCGCCCTGGTGCCCGGCTCTGTCTCCAGGATGGGCCCCTGAGAACGGCTGCCAGGTGTCGTTACGGGAAGAGGCCAGAGCTGGAGAAGACAGCGCACCTCCTCACTGCAGCTCAGCTCTGGAAGACGTGTGACCCTGATGCCTCAGGTACCTTCCGAAGGTGCCCTCCAGAAGCCCTGGCAGACCTGCCTTACCACCTGCTCCAGAGCGGGAACCGTGGCCTTCTTGCCAAGTTCCTCACCAGTCTCCATGTGGTGGCTGCACACCTGGAACTGGGTCTGACCTCTCAGCTCCTGGAGGCCCATGCCCTCTATGCTTCCTCAGTCCCTGGCGAGGAACAGAAGCTTCCTGAGGCTGATGTTGCTGCATTTCACACCTTCCTGAGGCAGCAGGCTCCCATCCTCAGCCGGTACCCACTGCTCCTGCACCAGCAGGTAGCCAACCAGCCTCTGGACTCGCCTCTTTGCCGCCAGGCCCCCCGACTCTCCCAGCGACAGCACCTCCAGTGTATGCTGCATTGGCTTAATAAACCTCAGACCCTGAAGCACCAGCAAAGCTCCAGCCTATCCCTGGCAGTTTCCTCCTCCCCAACAGCCGTGGCGTTCTCCCCTAACGGGCAAAGAGCAGCCGTGGGCACTGCCAATGGGACAGTTTACCTTTTGGACCTGAGAACCTGGCAGGATGAGAGGTCGATGGTGAGTGGCGGTGATGGGGTTTCCTCTTGTTCATTCCTCTCGGACAACGCCCTCTTTCTAACTGCCTTTGATGGGCTCCTGGAGCTCTGGGACCTGCAGCACGGTTGTCGGGTGCTCCAGATCCAAGCTCACCAGTACCAGATCACTGGCTGCTGCCTGAGTCCAGACCGCCGGCTGCTGGCCACCGTGTGCCTGGGTGGAGGCCTGAAGCTGTGGGACGTAGTCCGAGGGCAGCTGGCCTCCCAGCACACCTGTCCCAAGCCCCTGAACTGCGTTGCTTTCCACCCAGAAGGACAGGTGATAGCTGTCGGCGGCTGGGCTGGCAGTTTCAGCTTTTTCCACGTGGATGGGCTCAGAGTCACCAAGGAACTGGGGGCCCCGGGAGCCTCTGTCCGTACCTTGGCCTTCGGTGTGCCCGGGCGGGTTGTGGCTGTGGGCCGGCTGGACAGGATGGTAGAGCTGTGGGCCTGGCAGGAGGGGGCACGGCTGGCTGCCTTCCCTGCCCACCAAGGCTTCGTTGCTACCGCCCTTTTCCTGCGATCTGGGTGCCAGTTACTGACGGCTGGAGAGGACGGCAAGGTTCAGGTGTGGTCCGGGTCTCTGGGTCGGCCCCGTGGGTGCCTTGGTTCCCCCCACCTCTCTCCTGCCCTCTCCGTGGCTCTCAGCCCAGATGGTGATCAGGTGGCTGTTGGGTACCGAGCAGATGGCATTCGGATCTGCAGAATTTCTTCAGCTTCCCAGGGGGCTCAGGGTCAAGCGCTCGATGTGGCAGTGTCTGCTCTGACCTGGCTCAGCCCTAAGGTGTTGGTGAGTGGTGCAGAAGATGGGGCCCTGCAGGGCTGGCTGCTCCAGGGGGGCACCCTTCAGTCCCTCTGGCTCTTGTCCAGACACCGGAAGCCTGTGTTGGGACTGGCCACCTCCCAGGAACTCTTGGCCATTGCCTCAGAGGACTTCACAGTGCGACTGTGGCCAAGGCAGTTGCTGATGCTTCCACAAAAGACAGAAGACTTTCCTCGTAGCACTGAGCTCCGGGGACACGAGGGCCCTGTAAGCTGCTGCAGCTTCAGCACTGATGGATGCAGGCTGGCCACTGGGGGCAGGGATCGGAGTCTGCTCTGCTGGGATGTGAGAACACCCAAAGCCCCTGTTTTGATTTGCTCCTTCTCTGCCTGTCACCGAGACTGGGTCACTGGCTGTGCCTGGACCAAAGACAGCCTCCTGGTCTCCTGCTCCAGCGATGGTTCTGTGGCCCTGTGGGACCCAGAGTCGAGACAGCAGCTTGGTCACTTCCTGGGTCATCAGCATGCTGTGAGCGCCGTGGTGGCCGTGGAGGAGCACGTGGTATCCGTGGGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGCGTGGAGATGACCAGCATCCCCGCTCACTCAGGACCCATCAGCCACTGTGTGGCTGCTCTGGAGCCCCGTGCAGCCGGTCAGCCGGGGTCAGAGCTTCTGGTGGTCACTGTTGGATTGGATGGGGCCACACGGTTGTGGCATCCACTCTTGGTGTTTCAAACACACACTCTGCTGGGTCACAGTGGCCCAGTCAGTGCAGCTGCTGTTTCAGAGACCTCAGGCCTCCTGCTGACCACCTCAGAGGATGGCTCCCTACGGCTCTGGCAGGTGCCCAAAGAGGCAGATGACACATATAGACCTAGGAGTCCTGCAGCCATCACTGCTGTGGCCTGGGCCCCAGACGGTTCTGCAGCAGTGTCCGGGAATCAAGCTGGGGAACTGACCTTGTGGCAGGAAGCTAAGGCTGTGGTCACAGTACAGGCTCCGGGCTGCATCAGTGCTCTGCTCTGGTACTCAGCACACACCTTGATTGTTGTCAGTGCTAATGAAAAAGTCAGCGAGTGGCAAGTGGAACTCCAGAAGGGTTCAACACCCAGAAATGTCAGTCTTCGCCTGAACCGAGTTCTTCAGGAGGACTTAGGTTTCCTGACAAGTGTAGGCCTGGCCCCTGATGCTCACTCCCTCATCTTGGCCAAAGCGGATTTGCAGCTGTTGCACATGAAGCCTGGTGATGAGCCCTCTGTAATCTGGCAAAGTTATTCGGAAGACCCTATGGTGTTGTCCACCCACCAGGACTATGGTGTGTTTGTCCTGCAGTCAATGAAACTTCAAGTTCTTCCTTTCTCAGGGCAAAAGGAATTAGGAGAGTTTGAAGAGTGCCTGGAATTTGATCTGAATTTAGAGAATCCCAGTAATACCCTCATATCAGTAACTCAGGCCAAACCTGGATCTGAGTCCTCATTTTTGTGTGCCAGCTCTGATGGGATGCTGTGGAACCTAGCCAGATGCACCGATGAAGGAGAATGGATCACGGATAATATCTGGCAGAAAAAAGCAGAAATGCCTTCAACTCAAAGTTCAGAGACAGAGTCATGTATATGTACTAACACCTACAGCTGGTCAACAGTCACAGAGCTAAAGACACAGCAACGTAGAAAGATTCACTCAGGCCCTGTCACAGCCCTCCATGTGCTGCCTGAGTTGCTGGTAACAGCTTCAAAGGACAGAGATGTTAAACTGTGGGAGAGACCCAGTATGCGGCTGCTGGGCCTGTTCCAGTGTGAAGGGGCAGTGAGCTGCCTGGAACCTTGGCTGGGTCCTGACTCTACCCTGCAACTTGCAGTGGGAGACACCCAGGGCAATGTCTACTTTCTCTCCTGGGAATGAAGATCACTACTCAGGGCAAGGAGACTGCTCGTGCTAGAGAGGCAAAGCCTGAAGACATCAGTGGCTACTCTCCTGATACAATTATATAAATAAAGGGACAGAAAATCTCA EMBV3_17836 TCCTCTTAAAGTACACCTTCCAGCATAAGCAAGAATCCATCCGACCCAGGAGTGAAGGCC Gene GeneID:523627|ADAM33:XM_002692232:1481_cdna Constitutive 0 NULL GeneID:523627 13 GENE ADAM33 NULL ADAM metallopeptidase domain 33 EMBV3_00635 GTCGTCCATCGCCACCTACCGGCGGAAGACAAAACTGCAACGCAGCTCTAAAAGACACTA Gene GeneID:100335819|LOC100335819:XM_002695129:642_cdna Constitutive 0 NULL GeneID:100335819 18 GENE LOC100335819 NULL hypothetical protein LOC100335819 EMBV3_07618 TGGATCTTGCCAAGATGGCACAGAACTGTCAGACCTTCAGCAGTCTCAGCTGCCTGAACA Gene GeneID:615557|LOC615557:XM_002698578:150_cdna Constitutive 1 NULL GeneID:615557 26 GENE LOC615557 NULL similar to RIKEN cDNA A930008G19 EMBV3_18156 TAGTAGTGTGTATGTGTCTGTCCCAATCTCATGATTTATCCCTAGCCCCCACCTCCAGCC Gene BVV0102_139870 + 1 EMBV3_41880 GK000026.2:16159315-16231616 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06481 CTGTCCCCAAGTAGGGAGATCATAAGGTTGGTGACGTCCAGTGTGGTGTTTTTTGGAAAT Gene BVT0102_144139 + 0 NULL GK000021.2:29696819-29738280 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22299 TGTAGGATGTTGGAGAACCAAGAGCAGGAGACCAACAGCAAGGCCTTTACCGCCAAGACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09997 CCCTACCTCCTTCATCCTCACAACACCCTGGCTAAGGAAGAGCACCAAATCCCTTTACCT Gene GeneID:286812|GULO:NM_001034043:5_cdna Constitutive 0 NULL GeneID:286812 8 GENE GULO MGC128250 L-gulono-gamma-lactone oxidase EMBV3_21555 GAGAGACGGGTGACAGGCTGAACCTCACCTATGAATATACAGTATGTGGATTTGTGAAAC Gene BVT0101_011544 + 0 NULL GK000002.2:5744738-5752907 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104390 TCONS_00104389 TCONS_00104391 1 XLOC_062368 Coding TCONS_00104389 XLOC_062368 Coding Coding MFSD6 2:5751502-5822719 = TSS77305 4436 1 TCONS_00104389_5 799 7 0.937808919343968 9.19562864270594e-08 0.00463344618250915 0.00203620906947077 7.26806458275829e-07 0.00218803473851379 4.188292207653e-05 0.000279902843542684 0.00133420058665381 0.000519537804558633 4.35641423572324e-05 1.97359715690884e-13 7.95116539762115e-10 7.75610752122628e-05 0.000261668713320912 2.87629555400182e-09 0.000999857956900202 4.8831796620109e-05 0.000227890150819264 0.00581293757094061 0.00740899177041737 0.00421542507871902 0.00058799420418818 5.74363249251271e-05 3.15176121869744e-08 0.00678560910715413 0.00503843190696348 0.00330675742553606 1.77416834125526e-09 2.28683373595053e-05 0.000311723502982902 XM_002685219.3 MFSD6 PREDICTED: Bos taurus major facilitator superfamily domain containing 6 (MFSD6), transcript variant X1, mRNA. 0.0 7968 100.00 0.995716862037872 XM_005246655.1 MFSD6 PREDICTED: Homo sapiens major facilitator superfamily domain containing 6 (MFSD6), transcript variant X2, mRNA. 0.0 4762 84.37 0.99165915238954 TCONS_00104389_5 sp|Q6ZSS7|MFSD6_HUMAN MFSD6_HUMAN Major facilitator superfamily domain-containing protein 6; 0.0 1422 87.72 0.994993742177722 4 coding 0 0 0 0 0.144143866459209 0.522497535901688 -0.0164770500511786 0.819026536093465 ATTCAGCCTTCTCATTTCCCTGTTTTCTTCATATAGATCAACAGCCAAAATTTTGAAGGTCGTCAACTTTCTAATGGTGGTGATAAGCCATGGCGACAGATGATAAAGTTGCCATCTTAACCGATGATGAAGAGGAACAGAAGAGGAAATACGTGCTTGCTGATCCTTTTAATGGTATTTCCAGGGAACCAGAACCACCTTCAAATGAAACGCCGTCCCCCTCTGAAACAGCTGCTATTCCCGAGGAGGAAATAGACTGGATAGAGAAACACTGCGTTAAGATAAACAATGATCTTCTCATTTCCAAGGTCTTTTATTTTTTCTTTTACTCTGCATATGGCTCTCTCTACCCCCTTTTGCCTGTGTATTACAAGCAGCTGGGAATGTCACCCAGCCAGAGTGGACTGCTGGTAGGTATTCGATACTTCATTGAATTCTGCAGTGCCCCCTTTTGGGGTGTAGTTGCAGATCGCTTTAAAAAAGGCAAAATCGTCCTCCTCTTTTCTCTCTTGTGTTGGGTTTTATTCAACCTGGGCATTGGATTTGTCAAACCCGCTACCTTGCGATGTGTACCAAAGATCCCCCCGACAGTTCATCCCACCAATTCAAGTCACCCATTCACTATCCTGCCGACGAATTCCTCCATTGTCTCTTTCATCACCACCTCCCCAAGAATTCGTGACAAAAGGCACCTGCTTCCTTATGGTGGGCCAGTGATGTCAGAAGTGGGGCCCAACGTCACAGAAACTGTCATCTTCTCGACAGCTCCAAACAAGACCAGTGCACCCACTCTGCAGACTCAGACTGATGAAATTATTGACCATATTGTGACCTTGAACTCAAGCACTGCAACCTCCTCTACCCCTCCAGGAAATGCAGCCAGGGAGACAACCACTTCTATGGTCACCACCACCAAGTCTGTACCTTCTGACCGAGTCACTCTTGTTTATGATCAACAAGAAGTGGAGGCCATCTTCTTGGTGGTCTTGGTAGTTGTTGTCATAGGAGAGTTTTTCAGTGCCTCCTCCGTCACAATCGTGGACACAGTAACACTCCAGTACCTGGGGAAGCACAGAGACCGCTACGGCCTGCAGCGCATGTGGGGGTCCCTGGGCTGGGGCCTGGCCATGCTGTCTGTGGGCATCGGCATCGACTACACCCACGTAGACGTGCTCATCGAAGGGAAGGGCTGTAAGCCGCCCGAGTACCGGAACTACCAGATCGTCTTCTTCGTCTTTGGGGTTCTCATGACCATGGCCTTGATTGTTGCTACTCAGTTCCGGTTCCGCTACAGCCACTTCAAAAACAGTGAAAGTAAAGGGAAAGAGGTAGAGATCCCTCAGGTGGAGCGGAACAGCTCCATGGAGTCCTCTGAGGAGACACCGACCGCCACCAGCCACTCGCAGGCCTTCAGCTTCTGGGACTTGATCAGGCTGCTTTGCAGTGTGCAGTACGGCTCCGTGTTGTTCGTGGCTTGGTTTATGGGTTTCGGATATGGCTTCGTGTTCACCTTTCTCTACTGGCATTTGGAGGACCTGAATGGAACAACAACTCTCTTTGGGGTCTGTTCAGTCCTGAGCCACGTGTCTGAGCTGACAGCTTATTTTTTTAGTCACAAGCTTATTGAACTGATTGGCCACATCAGGGTTCTGTACATTGGTCTGGCCTGTAATACAGCTCGCTATATTTATATTTCCTACCTGGAAAACGCCTGGACTGTTCTGCCCATGGAAGTTCTTCAAGGAGTGACACACGCGGCCATCTGGGCGGCCTGCATTTCTTATCTCAGTGCCGCGGTTCCCCCTGAGCTGAGGACGTCTGCTCAGGGCATCCTGCAAGGCCTGCATCTGGGTTTGGGGAGAGGCTGTGGTGCCATGATTGGAGGCGTGTTAGTCAACTTTTTTGGGGCTGCTGCAACCTTCCGAGGAATTGGCATGGCCTGCCTGGTGATCCTCCTGCTCTTTGCCCTGATCCAGTGGCTGGCAGTACCAGATGAGGAAGAAGACAAGACGATGTTGGCAGAAAGGATTCCTGTTCCTTCTAGCCCTGTTCCCATAGCAACCATCGACTTGGTCCAACAACAGACAGAAGATGTTATGCCACGCACTGAGCCCAGACTTCCCCCCAAGAAAACCAAGCACCAGGAAGAACAGGAGGATGTGAACAAGCCAGCCTGGGGGGTCAGTTCCTCTCCCTGGGTGACCTTTGCCTACGCACTCTACCAGATCAAAGAGTTGATGCAGCTCACGAGGGACAGCCGTGCTTCTGAGATACAGCCTCTCCAGGGGACCAGTGAGAATCAGAAAACTTCTGCAGCTGGTGGAGCCCAGCTTGGACCATGTGAGGCTCCCCCTGACCCACCTAGAAGCCAGCCATCCCCTCCAGCAGCCGCATCTCAGACGCAGAGCAGCCCTGCTCACCCCAGTGTGGACCCGCGCGCAGAGGACAGTGAGGACCACCAGGCTCCGCCTGCCGCTGGGGGACACTGAGGCGTCCCGCTCACCTCACACCCTGCATGGAGCTGGGCTCCTCTGCCAGGACGGAGGGAGAGGCGCCTGAACCCAGGACACGCCTCACTTGAGGAGCATAGCGCCACATACGCTTCTAAACACCTGAACTCATCACCATGGAGACACTCACACACACAGGAGCTGCAGTACATATTGGCAGAAGCAGGCCACCTCCCCCAGCCCCACCGGAGTCACGGGGGAAAACGGAGTCAGTGAGGGCTTTCGGTTCTGGGTTTGTAGGTTAAGGACCACAGGACTTCTCTGCCAGGGCAGTAAGAGTTGGAGCCAGCAGTTACACTGAATGGGTGGAGGGGAAGAAAGTGTTTCAAGGTGAATGCTGATGTAAGTTCCCTCTTCTGATTATTTATTCTGATTATTTGGTTCTTAATGCAAACGGGGAAGAAACAGAATACATCTATAATTTTGTTTCTTTTAAAAAGAACCATTTAAAAATTATAAGACTTATTTTAAAAGTAACCAGATAAAAGTTGGTAGCATCTATGTTTTTGTTTAATACGAAAGAAAAAAAAAAAAAAGGAAAAAGTTTCGTTAGAAACTCGGGATATCTCTAGGAAATATATTTTTATATGTGTATGGTATATAATGAAAATAGTCAATTCTTGGAGCAGCAAAAGCTGTTACTGACCACTGCAAGCTAAGCTGAGCTTTAAAATGCCTTCTGTTTTAAATGGGCTTTAAGACCAGAGGAAGGAATATTTGAAATAAACCAACCAACTCAGTATGCTGTGGCTTGATAGACAAAGGTTTACTAAATATATTGATACTGTAAATAGCCTCTATCACTATTTACAGCTTTCTAGTGATTTGGGCTCTAATTAGCTGATGGAATAAAACAAACAAACACAAAATCAATGAATTCCTAAAGGTTTCTTTTAATTAAGCAGTACTACTTACAAATAACAGTATAAGATTTAAGTGCCTGGGGAGGGATACAATTTTTTAAAATTACATAATGGCTCAGTTTTTGTTTTGTTTTTGGTGAGGGGAAAAGGTGGTGACAGGAAGCCAGGAACGGGAAAGACAGAAATAAGAAGTTAAGTACACTTTCCAATGACCTAAGACACAAATATCAGTACATTCTTTCCCATGAAGACACAGTCAGACACTGGACAGTTCAGGTATGAGCACACTACTGGGATACTGCAGCTACAGTCAGGACAGTGGCCAGGTGACTCCTGCGTAGAGCATGCTGCTAAAAATGAACGCTGAGGTTACAGGAAGCCTTGGGGGAGGGCTGTGGACAAGGGAACACGGCTTCAGCTGAAGGAAGGTCAGTTACACAGTGTCTACGATACTGTGGATGAGCACAGAGGAGAGGAAAGAAAAGAACAGAGTTAAAAATGAAAAACTCACCTTCCTCTCTGACCCCAACTAGGCAGGACCAACTGTAAAGTAAGGGCTTCCTCACGACACCGCACTTCTGCCCACAACAGCATCTGGGAGAAGGCACTCTACACTTGGATATCTAGCTTCACCACAGCACACAGCCTAAAAATAAAATAATGGGAAGGAACAGAATTAAGCAAATAGTTATTTTTGCACTTGACTGAAATGTACTGTACTGTAAATTATCATAACTCATTTTAAGTGACCTTTAAAAATCAGATGTATTTATTATGCTTATGTAATTATAGAAATAGAGAGACGGGTGACAGGCTGAACCTCACCTATGAATATACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAAACTTCTACTGTGTCTTGTGTTTACAGTTCTGATTTATTCCTCTGAAAAGCCTGCTGTTTTGGAAATGCACAGTTGACATGTTCAAATAAACCTAACCATTTTTAAATATTTCCTAAATGATAATGATGTGACCAAACAAATAAAAGTCCCTTGCTCTGTAATGAATGAGATCAAATTCTACAGACC EMBV3_34789 CTTCTATGCTCAGGTCAAGGACTACGAGAAGGCCCTGTTCTTCCCCTGCAAGGCTGCAGA Gene GeneID:541061|RAPSN:XM_002693546:173_cdna Constitutive 0 NULL GeneID:541061 15 GENE RAPSN NULL receptor-associated protein of the synapse EMBV3_10803 CCATGATTCAGCCAGCATAACTGATGTTGATAATACTTTTTATATGGAATCACTAAGGCC Gene BVT0102_094508 + 0 NULL GK000008.2:25017690-25030407 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26676 ATATTGAAATACTACCTCCCGAGTGTTGCCGGTGTTTGTAAATGGAGCCTCTGGCTTCTG Gene BVV0102_152282 + 1 EMBV3_04984 GK000014.2:83175604-83201742 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35600 TTCCTAAACTCCATAGATCATTCTCAACTATAGACTTTGGGGCCATAAAACTCATCTCAC Gene BVV0102_168008 + 1 EMBV3_36055 GK000001.2:38724394-40547023 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29950 CCGTGTTTGGGATGTGGAGACAGGGAACTGCATTCACACGTTAACAGGACACCAGTCGTT Gene GeneID:540932|FBXW7:NM_001076249:25_cdna Constitutive 0 NULL GeneID:540932 17 GENE FBXW7 MGC139849 F-box and WD repeat domain containing 7 EMBV3_32704 AATCATCTCTAAATTACTTGGAAACCCATGGGGCTGGTGGAGGGAGTACATGAATTCCTC Gene BVV0102_180093 + 0 NULL GK000011.2:71811802-71827004 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12118 CTCCAGTCACTCCTGCTCAATGTCCATACAGAAGAACTGGGTTGCTCAATGGTGAGACCA Gene BVT0102_287419 - 0 NULL GK000007.2:70027840-70213697 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217576 TCONS_00217577 TCONS_00214076 TCONS_00217573 TCONS_00217574 TCONS_00214091 TCONS_00214081 TCONS_00217575 TCONS_00217578 TCONS_00214090 2 XLOC_131542 XLOC_130601 Coding TCONS_00217575 XLOC_131542 NonCoding Coding HAVCR1 7:70028624-70277459 x TSS161996 1140 1 TCONS_00217575_1 94 4 0.995434707475667 0.000638396477582335 9.49101491149576e-05 0.000210471658964681 0.000256012636057189 0.000114269822000104 1.94716195558528e-07 7.95733896802573e-05 0.000230925735237576 0.000197166046580344 1.49775827917838e-29 0 0 2.72391444933441e-05 3.36819259717248e-05 9.42556508741504e-05 0.000115689083222054 0 0 0.000452551653195272 0.00191337229808257 0.000118462321089776 0 0 0 0.000267154068894135 0.000226234929997937 0.00109649774133368 0 0 0 XM_005209662.1 SGCD PREDICTED: Bos taurus sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) (SGCD), transcript variant X1, 0.0 1698 100.00 0.824561403508772 XM_005265965.1 SGCD PREDICTED: Homo sapiens sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) (SGCD), transcript variant X1, 0.0 681 77.50 0.751754385964912 0 noncoding 0 1 0 0 0.614659615515436 0.110258349686458 -0.138743158858575 0.0855792671327272 CTGCCCAGGTCAGAGTTTTGGTAACAAATCTCCTGTTGGATGTTCAGAAGAGGCTCCAGGATCTTGATTTCCTGAATCCTGGCTGCCTTAATCCTCTAGTGAATGTTGAATTCATCCCGACATCAGGTACAAGGCAAGGTCTGGAGAAGTGACACTGCTGCAATTTCAGGCTTAAATCAACCATAAATAGCAACTCCAGAGACCCTAATGCTGAAAAATAAGCAATCATATGGTCTCACCATTGAGCAACCCAGTTCTTCTGTATGGACATTGAGCAGGAGTGACTGGAGGGAGCCCGGGGTCCAGAAGCCAGCAGAGCCACTGGTCAAGCTAGAACCATCCTTCCTCCCCCAACTGCTAAGTGACCAAGCAACACACGGTTTGTTTTTACCCCCGACGTGTGCAATCTCAGCCTCCCGATGCTTGAGTGTCATCTCAAAAATACCAAACCTCTTATTCATTTTCTATGGCAAATGTCACCTCTGCTTGTGAAGTAAGAAAAAGTAGAACCCTGTTGAGGAAAAAACAAATGCCATTCAGGCCTACAAATACGACTTCATTTAGGATTGTGGGGCCCCTGCTTGCCAAGTGGCATCCAGGGAGGTAGAAACCAGTTATGTCTCCCTTCCGGGCTCCTCGGAGTCCACATCTGTCAGCCACTTGGTTTGTCTACCAGCTTTTAAGATGGTCATTATTTTACCGGTCATTATTTTACCCTTTCCCTCCAATCACCCAAAATAAACTACAGGTAACAACAAGATAAACAGGATGTGCTTCTCCTTGCTGAGTGCATTGACATAAGGCACAGGCACATTTCCCCCTCTTTGAACAGAGACGGTGTAATCTCCTGTCCCAGCACAAGAGCTGGCCAGGGTGACCCTGGAGCGTGATGATGAAAGTGGGGTGATGGGAGGTAGCTGATGGCGGGAATTAGGGAGCTGCTGCCATATGCAGGGGAGCAGGGACCACTGGGCACCAGGGGACAGAGCGATTCTAAGGAAGACACTTGACTCTTGAGTAATGTTCAGTGAACATTCCTGGGGGCACATGGTACTTCATGGCTGTGATTCTTGGGTCACTATTCTTAGAGAAAACAACGGTCAATTTAGGAAAATGAATATCCGAATACTGAAAAACTTT TCONS_00214090 r 5' 0 TCONS_00214090 r 5' 0 EMBV3_09781 CGTGGAAGGCAGCTGCGATCCCTCGGACCATCTCAGCCAGCTGTGTCCGGTTCTGCCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38636 TGAAGACGACCCCAAATCAGACTATAGCAGTGAAAATGAAGCCCCGGAAGCTGTCAGTGC Gene GeneID:534321|SOX6:XM_002693041:312_cdna Constitutive 0 NULL GeneID:534321 15 GENE SOX6 NULL SRY (sex determining region Y)-box 6 EMBV3_06100 GTTCTGTAGAGAGGGTTCAGTCTTTCCCGCTCCGCAGGTTGGGGGGAGAGGGTTCAAGAT Gene BVT0102_316331 + 1 EMBV3_05974 GK000030.2:40838458-40883566 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13935 TAAGACTTTCAAAACTACTACAGGCCATGACCCTTACAGCGGCCCCCCCTTCTCTGATCA Gene GeneID:509018|SMPD2:NM_001075383:14_cdna Constitutive 0 NULL GeneID:509018 9 GENE SMPD2 MGC139346 sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) EMBV3_15566 GGTACAACTGCACATAAATTAAGAGTGGTTCAAGATGGTGGAGTACAAGGATGTGTGCTC Gene BVV0102_120026 + 0 NULL GK000022.2:40172603-40603978 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31268 GCTAAGCCAGAGAGGAAAGAAGGAATATGCTGGAAGTCTCAAGATGGAAGGCTGTACTCC Gene GeneID:782603|ANGPTL3:NM_001080345:81_cdna Constitutive 0 NULL GeneID:782603 3 GENE ANGPTL3 MGC128789 angiopoietin-like 3 EMBV3_01685 CACCACCAGGTACTGTGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAACCAGTTCCA Gene GeneID:100336804|LOC100336804:XM_002689567:28_cdna Constitutive 0 NULL GeneID:100336804 8 GENE LOC100336804 NULL hCG1818607-like EMBV3_26278 TCTCAACTTGGGTCAGCATCACAGTCTGAAGTTGTACAGGAAGACAGAAAAAGCTCCATG Gene GeneID:613812|RNF168:NM_001076289:98_cdna UTR3_Alt 2 NULL GeneID:613812 1 GENE RNF168 NULL ring finger protein 168 EMBV3_07287 CATCCTGGTCTTCGCGCTCTTCTTTGCGCAGTGGCTCGTGGGCTTTAGCTTCTTCCTGTT Gene GeneID:317663|CYB561:NM_174837:200_cdna UTR3_Alt 2 NULL GeneID:317663 19 GENE CYB561 MGC140653 cytochrome b-561 EMBV3_12023 CTCACGCAGCTGCAGGACGCTGTGAACTCGGCTGCTAGCTTATATAAGCTGGAAGAGGAA Variant GeneID:539496|MED21:NM_001038566:17_cdna 64^279 2 EMBV3_28608 GeneID:539496 5 GENE MED21 MGC133576 mediator complex subunit 21 EMBV3_38901 TGGTCCTCCAGCTACTGACTACCTCTCATTCACCTGGCTATCTCATGACTACTAACTGGC Gene GeneID:505854|C28H10orf57:NM_001075228:281_cdna UTR3_Alt 1 NULL GeneID:505854 28 GENE C28H10orf57 C10orf57 MGC140183 transmembrane protein C10orf57 homolog EMBV3_37043 AACGTGCAGGTGGAGGTGATCACCATGGAGTTTGCAGATGGCGTCATCTTACTCTTGCTG Variant GeneID:790892|PARVG:NM_001083805:240_cdna 679^885 3 EMBV3_38541 GeneID:790892 5 GENE PARVG MGC148449 parvin, gamma EMBV3_14672 CCCTTGTGCCTTATGGGGAGAAGTGCCAACAGCCTCCAACAACACCTGGGTGATTAATTA Gene BVT0102_261484 + 1 EMBV3_05892 GK000005.2:72082471-72156270 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29039 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:520044|LOC520044:XM_002693492:134_cdna Constitutive 0 NULL GeneID:520044 15 GENE LOC520044 NULL similar to histone cluster 1, H2bd EMBV3_38357 GTGTCCACACTGCACAGACACCTCCGTACATCCAGACATACTGTCCCTGTCACAATAAAT Gene BVT0102_063461 + 0 NULL GK000024.2:57239493-57298433 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143642 1 XLOC_088063 NonCoding TCONS_00143642 XLOC_088063 NonCoding NonCoding - 24:57243033-57246194 - TSS107853 3161 5 TCONS_00143642_2 52 1 0 0.000163561127231136 0.000139870624743777 7.06273340154714e-05 1.0508256094907e-05 0.000118704708278183 5.09229440046823e-05 0.00014943694638738 0.00018711519428741 0.000634005652175747 5.46689756950529e-05 0.000116595589546816 1.58366159120372e-05 5.62783357605344e-05 1.19051227295765e-05 2.79378800572807e-05 1.67109381543945e-05 0 0 0.000197364780303241 0.000311680859017301 1.82470267909409e-05 1.17378452003985e-05 1.16090440130944e-05 0 0.000379192172300672 0.000300898398863342 9.63859561317875e-05 1.21545938515581e-05 6.14312751027703e-06 1.90200631232183e-06 NM_004852.2 ONECUT2 Homo sapiens one cut homeobox 2 (ONECUT2), mRNA. 0.0 1853 73.35 0.992723821575451 0 noncoding 0 0 0 0 -0.123529720300141 0.284464661727241 0.0526877006388853 0.410194276280587 NNTTGGTTAGTGATTCTTTGGCATGCCAGTCTCAGCATTTGGGTCTCTGGTGTCCTCTGAAGATGTCTACACTGAAAGAGGCTGCCTTCGTGGCCTGAGATTTCAACCCTGGTCCAACCAAGTGTAGACACATATACCCTCAGTGTTCCTGGGGACCACAGGGAGATATCATAATGTAAAAAAAAGGCAAGAACTTCCCTCCGGGGTTTTGATAAATGTCTCATAGCAAATAATGCCATACCAGAGAGAAGTGCTTGCTTCTGAAAAATTATTTACGTACATATATAAATACATGTGTGTGTCTATATATTTGTGTATTGAAAAGTTAAGTCCTACAGAATTTCAATTTGTTAAAAATGTGAAAGAAAGAAGAAAAAACCCTGCAAACTGAATTATAATGGAATTTGACCCACTATGTCTTTCCTCAAGCATTTAAAAACTTAGGTTACCAATTTTAGAAAAAAAAACTCTTTGGACTTAGTTATAGTTTAGGATCCATTTCCTCAATCCAAGAAAAATTCCAGGCATTAGCAATGAAAAGGGCAGGGCAGAGTGAAGGGACAGTTCCAAACCAAATTCACATTCTTGAGACAATGGAAATCCAAAAGCTATTGGCTGGAAAATTCTTTATTTCTTTGGGGAAATAGGTTTGCCTCCGTTTTTGTTTTCAATGTGATTTTTGTTCTGAGGATGTAGTTCTTTCATTCCAGGAAACTTTTATTTTAAAAAGAGCCAATATATTTCTTAAAAAAAAAAAAGAAAACAGCAACAACAACAAAAACTCATCCACAATATTTAAAGGCCTTTCCAAAATGTAAAATAGCATGTAGGTTGTAACACTTAGCAGTACAGGTGGGAATAAGGCAGGTGCCCTGACACTTGGGAGAAATCACCTCTGCAGGGTCTCTTTTCCTGAGGGCTCTGGAAATTCAAGCTTATTTTCATCTCTAGCTAAAATAAAATCAAAATTAGGAGTAAATCTGATACACACACACGCACATTTTTGTTAAGTCAGACAATGTATTTCAGAGCCAAACATAAATGCCTTTTAGATGGTCAGCCATTTTTCTTTATGCTGGGTGTCCACCTATTCATGCTGATATATTAAAGTTAAACGGCTTTTTGAAAGATATGACTGCCACCTGGGTGCAGGGGAATGCTTTCCCAGTTTTGAAAGTGCTGGTAGAATTATAGACATGTCCATTGATTGCTGTTCCTGAAGCATCGTGACAATATACCTTTGTGGTGAACTCTGATTTTCAGGAGGCTGTATAGTAGAAGTAGGAATTTCTTAAAAATAGAAAAAGAGCAGGCTGGGTTCCAGTCTTATTGAAGAATAATGGAGTATATTAAAAAGTAGAGAAAAAGATGATCCATGTGGTCAAGCAAGGTTGACCCCAAAGCCCAAACCCAAGTACTGTGACAGTAACTGTCACGATTCCTAACCAATCAGAGCTGATTTTTTGTTGTTGCTGCTGCCAATGCCTTTTGGTTCAGACTAGTTAGCCTACAGTAAGAGCAAGTGAAACGTGGTAGACAGAAAAGGGATACAGTTGGTTTGCCTATAACGTTCTGATGTTTACTTGTAAGATTGGAGAGCTTTTATACATTTAGCAAAGACCAAGTCGCCTCTACAGCAACAGCAGATTCTAGTTTTCAAATAAGGCCACAAAATCCTTACTAAAAGAAGCAAGTGTACCGAGTTCACTGTATAAATCTTACCTAGTTAATGATGTTGGCTTTAAATATGGCTGTCCCAATGCCTATTTTCTACCTATGATTTTTTTTTTCTTTCCAAGGGCCAAGGGGAGGGAGGGTTGGTTTATTTGTTTTAGAAAGTCTCAGAATTGGTTATAAAAATTTTTTAATGTATTAAAATGACATAGAGCCTCCCTTAGGTAGGCCCTGAACTTACAGTTGAGGCTGATGGGCTGTTCCGTGAACCCCACGGGGACCGGAAGTCTTCCTGTTCTCAGATACCAAAAAGGCTCTGACAGCCAGAGGCAAGTGAAAGCTGGAGCCTAAGCTTTCCTTACTGGTGTTGAGTTTAGTTGCCTGGAATTAACCAGTTCATTCCCTTTTAATGGAGGAAAAACACACATGGCTACAGATCTGTTCATTCCACAGAAGTCTTCTACTCTGCTCCAGCCTTAGCAGAGATATTTCCCACCGCATAAACCTTGGTAGACACATTTGCCTAATCCTTGTACCGTCTTCAGCTTGAGTGTATACAGATTTAGACGCCTCTTTCACCATGTATTCTCAAAGGCATCTTATAGCAACACCCATGGCCTGTGAGTGTCCACACTGCACAGACACCTCCGTACATCCAGACATACTGTCCCTGTCACAATAAATACGTTTTCAATGGTCGTTTGACATATATGTGGTACTTCTACAGTGTACACTGTTTTTATTATTTATTGTAACATTGAAAACCAAAATGCGGGGTGGGGGGGGAACATTCCAGCATCTTCATTCCCTACACTTGGAATTCCACTCATTTGGTCACATCCAAGGTAAACTCAGCTTTCAAGAAACCTTGCATTTTATTTAATCATCTGTGTAAGAATGACACACGTGCTTGATGACTTCGGTTGAATAGCTTTATTCTGGATCTTTCATTAACTAAAGCTAAATCCAAAGACCTGAAAAAAGAACACACACCCCCAAAAAAAAGGAAAAGGAAGGAAAAAGTAGCAAAGTACGAACTAATAAAGAAAAAAGTGGGCTCTGGTTTCCAGGGTTGAGAAAATGGTGATGTGGTCGTGGGGGGGCTGTGTCAGCTAGAGGGAGGGACATGGTGATTTTTTTTTCATGCTTGTCACATTTAAATGGTCTTTTTGAATGTGAGAAAGTTCAGAGGTTATAATTTTCTGCTTTATTTTCATTTAGACTGTGGAACGAGGCTATACGTTTTGTCCATTGAAAAATGAAGACAAAGAAACCTTTTTTTTTTCCCGTTATCTCTTTGGGTTATAACCCAACAAGCTAAGTACCATTAATGTAATTAATTTATTTAAATTAGTTTTTAGCACACTGAATGTATAGGATTTTGATAATTACTTAATCTTTCCTTACTCTGATTTTACTCTTTGTGCTTATTTATCAGAACCTAAACCAACGGTGCATCAGAGATGCGCAATCCCTTTTAGAATCCC TCONS_00139416 TCONS_00139420 . 3' 99 TCONS_00139416 TCONS_00139420 . 3' 3259 EMBV3_35446 GAGTGTGATTCTTTTAGTCCAGGCAGTTTTTTCTATTTTATAATAAGACTTCATACATTT Gene GeneID:504716|AHCTF1:XM_002694006:316_cdna Constitutive 2 NULL GeneID:504716 16 GENE AHCTF1 NULL AT hook containing transcription factor 1 EMBV3_34868 ATGTGGTCGGGGTAAGGGTGCTGCTCAGACCTCAGACTTGATGGAGAACACAAGGAGTGA Gene BVV0102_249832 - 1 EMBV3_27137 GK000029.2:5671556-5683522 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164438 TCONS_00164439 TCONS_00162932 2 XLOC_100223 XLOC_099766 Coding TCONS_00164439 XLOC_100223 NonCoding Coding - 29:5672353-5673043 - TSS123042 204 3 0.708272859216255 0 0 0 0.00035275126943973 0.000108907141098658 0.000235009033413564 0.000339669692004203 0.00101009864859744 0.00150774729280714 7.30957840288906e-17 2.25662640128123e-09 0.000776934055344967 2.23408704026483e-08 0.00947588399797099 0.00793908432200746 0 0 0 0 0 0 1.8130425858456e-05 5.32463889620547e-05 0.000321520416170036 0 0 0 7.08052010378395e-05 0 0 XM_609030.6 LOC530556 PREDICTED: Bos taurus preferentially expressed antigen in melanoma-like (LOC530556), transcript variant X2, mRNA. 3e-30 134 98.70 0.372549019607843 0 noncoding ACGCAGAAACTTCTCGCTCTGGAGTCACTCCTTGTGTTCTCCATCAAGTCTGAGGTCTGAGCAGCATCCCTACCCCGACCACATCAGACCTGGGTTTCCATCTGGCCCAACTGGAATCTTCTATGATCTAGCATTGCAGAAATGAAGAAGTGGACATTTTAGGGTATATTCAGTATATATTTGGATTTTTCTTCTAAATATTTC TCONS_00164437 s 3' 314 TCONS_00164437 TCONS_00164437 s 5' 0 EMBV3_01573 AGCTGAGCTAGTGTCTTAAAAATGGCTAACCGGTGAATTGGGAGCCATGTAACAGCTGCC Gene GeneID:535622|MAP3K8:NM_001099071:67_cdna Constitutive 0 NULL GeneID:535622 13 GENE MAP3K8 MGC159463 mitogen-activated protein kinase kinase kinase 8 EMBV3_33075 GAAAGTATCCGGCATCAAATGTCGTGTGCGGTTTGAGAGTCCACGTCCAAATGGAAAGCC Gene GeneID:782145|LOC782145:XM_002698587:188_cdna Constitutive 0 NULL GeneID:782145 26 GENE LOC782145 NULL similar to hCG1648656 EMBV3_05615 CTCAACGTCCCCATTCTGTACTTTGCGGGTGACGACGAAGGAATCCAGGAGAAGCTACTT Gene GeneID:281610|AKAP3:NM_001101039:2_cdna Constitutive 0 NULL GeneID:281610 5 GENE AKAP3 NULL A kinase (PRKA) anchor protein 3 EMBV3_30130 CAGAGATTATCAGTGGGCGGATGACATTTGGATGTCTAAAAAGGCTTCAGCGTAACAACG Variant GeneID:767977|BRP44L:NM_001077042:23_cdna 306^438 1 EMBV3_04445 GeneID:767977 9 GENE BRP44L MGC127561 brain protein 44-like EMBV3_31991 GTCTCAGCAGGTGTTGCTGGCTTGGGACAAGCAGACCTCAGACCTCGTATGGTCACTTTT Gene GeneID:615171|CDK10:NM_001038577:441_cdna Constitutive 1 NULL GeneID:615171 18 GENE CDK10 MGC134436 cyclin-dependent kinase 10 EMBV3_40840 CACCTGGAATACAGGGGCTGCCATGCCTCTTTGAAAGTTTGCAACTAGAAGGTTCATGTG Gene GeneID:281371|OXTR:NM_174134:17_cdna Constitutive 0 NULL GeneID:281371 22 GENE OXTR NULL oxytocin receptor EMBV3_03266 GTCCTGTGATGGCGTAAACGCGGTACTACACCCTGTTGGTTGTGTAGTTTTAGGATCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13721 CCTTCAAAAGCCAGCAGTGTATGATGAGAAACAGGGACCGGAAGGTGTCCCGCATGAGAT Gene GeneID:515434|ACRBP:XM_002687869:118_cdna Constitutive 0 NULL GeneID:515434 5 GENE ACRBP NULL acrosin binding protein EMBV3_32874 CAAGATGTGTAAGCCTTTGCTTGAAAAGAGATGACAGTCTAGTATCTTCCAATATAGATG Gene BVV0102_159297 + 0 NULL GK000004.2:56517541-56547058 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37213 CATAGCAACTGGAATCTTGGCTCCATAAAACTGTTTGACAGCTGCCCCAAGGGCTCTTCC Gene BVV0102_171989 + 0 NULL GK000028.2:4907340-5250005 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37062 TCAGGCAGTTCAACCGTGTCAGCCCGGCTGTGGCCGACGCCATTGTCAGCGCCTTCCCAT Gene GeneID:515662|EME2:XM_002697918:553_cdna Constitutive 1 NULL GeneID:515662 25 GENE EME2 NULL essential meiotic endonuclease 1 homolog 2 (S. pombe) EMBV3_02597 CAGGGCGCTGAAGGGGACAGGGAAGTGATGAATGAAGCACGTTTGATTTGGATTCAGAAG Gene GeneID:508097|ENTPD6:NM_001045991:26_cdna Constitutive 0 NULL GeneID:508097 13 GENE ENTPD6 MGC127592 ectonucleoside triphosphate diphosphohydrolase 6 (putative function) EMBV3_15320 CAGTGTTTACCCTGGGAAAGGGATTAGGTGGGAAAGTGAGACTCAGATCGAGATCCTAAC Gene GeneID:508902|USP28:XM_002692994:165_cdna Constitutive 3 NULL GeneID:508902 15 GENE USP28 NULL ubiquitin specific peptidase 28 EMBV3_16449 TCATCTCCGGACTCTCCGACCAGTTAATCCCACCAGTAATGATGAAGCAGCTCTATGAGC Gene GeneID:513848|ABHD13:NM_001101089:57_cdna Constitutive 0 NULL GeneID:513848 12 GENE ABHD13 NULL abhydrolase domain containing 13 EMBV3_06604 TGCTACATCATGAAGATGGCTCCGCAGAACATCCCAAGTCTCGAGGCTCTCACCAGAAAA Gene GeneID:282071|SFTPC:NM_174462:55_cdna Constitutive 1 NULL GeneID:282071 8 GENE SFTPC NULL surfactant protein C EMBV3_33320 TTCTTGCCTGAAAAATCCCATGGACACAGAAGCCTGGGACGGCTGACATTCCAGGATGTG Gene GeneID:100141212|LOC100141212:XM_002695223:964_cdna Constitutive 0 NULL GeneID:100141212 18 GENE LOC100141212 NULL similar to mKIAA1611 protein EMBV3_23949 GTGATATATGCCGAATGCCACACGTAAACACTTGACTATACAGACTGCCCCCTCCTCTCC Gene GeneID:528842|NEFH:XM_002694605:119_cdna Constitutive 0 NULL GeneID:528842 17 GENE NEFH NULL neurofilament, heavy polypeptide EMBV3_28003 GCCTTAACAGACTTCACGTTCATGGTGAAGGTTGTGGATGAGCGAGAATTTTTTGAGATC Variant GeneID:515902|PCCB:NM_001038548:36_cdna 659^970 1 EMBV3_40136 GeneID:515902 1 GENE PCCB MGC134255 propionyl Coenzyme A carboxylase, beta polypeptide EMBV3_42692 CAGACTTCCCAAAACTCCACCTTTACTCTGTAACACTTTGACTGTATCCTGTTTCATGGT Gene BVT0101_013803 - 0 NULL GK000007.2:92434911-92440984 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217981 1 XLOC_131615 Coding TCONS_00217981 XLOC_131615 Coding Coding LYSMD3 7:92437967-92451867 j TSS162186 4419 1 TCONS_00217981_3 306 3 0.682279300669113 0.000166157663209253 6.05526267200314e-05 0.000130796773116503 0.000112255554336245 8.31867591733563e-05 0.000129636073058875 4.5449857778065e-05 2.48132828035857e-05 3.77883669717343e-05 0.000282279438356706 5.77246516787109e-05 7.76796139821508e-05 1.94772604799418e-05 2.68446540517238e-05 8.65391530888348e-06 0.000591777022849947 0.000143423568038424 0.000579344301502654 7.5681636339687e-05 8.33900543275795e-05 2.18932665108561e-05 0.000980691404135457 0.000247813273467869 0.00058737641509775 0.000127135929363242 0.000104858329547668 0.000137320202114854 6.05905234548765e-05 3.60043581361085e-05 0.000110152771089518 XM_005209730.1 LYSMD3 PREDICTED: Bos taurus LysM, putative peptidoglycan-binding, domain containing 3 (LYSMD3), transcript variant X1, mRNA. 0.0 7921 100.00 0.993663724824621 NM_198273.1 LYSMD3 Homo sapiens LysM, putative peptidoglycan-binding, domain containing 3 (LYSMD3), mRNA. 0.0 2782 73.84 0.978275627970129 TCONS_00217981_3 sp|Q7Z3D4|LYSM3_HUMAN LYSM3_HUMAN LysM and putative peptidoglycan-binding domain-containing protein 3; 0.0 573 89.22 0.996732026143791 0 noncoding 0 0 0 0 0.220524871045722 0.395831009005959 0.014762648396977 0.777705807204849 CCACCTCCGCCCACTTGACGCGATGACGCACGGCAGGTTTGCGGACGTGGCGGCGGCGCACGGCACGAAAGGCGGAGACGTTGGCGGCGGCGGCGGCGGCGACGGTGGAGGAGGACAGGGGCAGTCAGAGACTGAGGCTCGGCCATGAACTGGCCCGGGACCGCGGCGGCGGCGGCGGACCTGGTGGCCGTCTCCTCGTTAAGTCCCCCCTGCTAACGGGACAGATTTGGACATGGCTGGGAGGCATCAGAATCGTAGTTTTCCTCTTCCAGGAATTCATTCAAGTGCTCAAGTACATGCATTTGGAAATTGTGCAGACAGTGATATGTTGGAGGAAGATGCTGAAGTGTATGAGCTTCGATCCCGAGGAAAAGAAAAAATCCGAAGAAGTACATCAAAAGATAGACTTGATGACATTATAGTGTTAACAAAAGATATACAGGAAGGAGACACTTTAAATGCAATAGCCCTTCAGTACTGTTGTACGGTAGCAGATATCAAGAGGGTTAACAATCTCATCAGTGACCAAGACTTTTTTGCCCTTAGGTCTATCAAAATTCCAGTAAAAAAGTTTAGTTCATTGACTGAAACACTTTATCCTCCAAAAGGAAGACAGGCTTCACGTCCTTCAACTGTTCAGTACCTTCCAGAACAACAGGAAGTTTTGTCAGCTAATGACTCTCTTTCTTCCACCGAGTCAGCTGGTAGCTTTCTAAAAGAAGTAGACCGAGACATCGAACAAATAGTAAAATGTACAGACACCAAAAGAGAGAACCTTAATGAGGTGGTGTCTGCTTTGACAGCACAACAGGTCCGTTTTGAACCTGACAACAAAAACATTCAACGGAAGGATCCTTACTATGGAGCAGACTGGGGAATAGGGTGGTGGACAGCTGTAGTGATAATGCTGATAGTAGGCATAATAACACCAGTGTTTTATTTGCTGTATTATGAAATTTTAGCTAAGGTGGATGTCAGTCACCATTCAACGGTGGATTCTTCACATTTGCATTCAGGAGTCACACCCCCATCACAGCAGAGAGAAATGGAAAATGGAATTGCTCCAACTAAAGGAATACCCTTTGGTCCACAAGATGATCGTAAACTATATAATCAAGATTCTCAGTTACCTGCTGCTCAACACAAAACATAGCAGTTAGTTCACAATTACGGTTACCAATCACATGTGCATTTGGAACTTGGTCAATCAGTTACAGTCAGTAACCACTTCAAAGGCAGAATTTAGACTGAAGATGCTTTGTTTTTCACCTTTTGTTGTTATTTGGAGCCACTTACAAATGGGTTGAGTATAAAATCCTTACAGTTGCTAGTTGTTGATATTGAAAGCAGTGAATCTGTGTATCTGTTGTATCAATGCTTAAAGCAGAAATGAATTTGAATGTGTGTCTAGGAAGTTCTTGAAAAATGCATCTTTTTCTTAGTCAAGACTGGTTATCTTTAAATTTTATTTTTAAAGTATTTTTGTTTTGAGGTTATTAGTAATACATTTATTAAGCAAATAATGATAGCATCAGATGTCTGCAGCTGATGAAAATTTTAATACTGTGAGCCATCAAGATGTTCAGTTGCAAGAAAGTCTAATTCTAAAATTATTTGATAGCACTTAAAATTCTATTTTGAAGTTTTAAAAAAGCATTTAGTTCATACACTATGAAAGCATAAGTAGAACAGAAATGGGAAAGTTATCTATAATGTCTGTAATAGAGGGTGAGATATATTATTATTAAACCCCCCAAATAATGTGTTACTGTTGGGAAGTTGCCATTTGGTCACTAGAACACTGGATTATGTCAGGACGTAAAAGTTATCTTTATCTCTTAAAGAATGCTGCCACTGCTTCTGTTTTTTAAGTAATTTTATTTGCCTCTGATATTTGAAAGCACTTTTGTTCTTCTTTGATGAAAGTGTTACACATGTACAGATTACCATTATTTAGCAAATATTTCCTTACATACTGTGATAAGTTGTTGCTGTATTACATGTAATAACATGCCTTAATTACATTTAATGCCTTATATAATTTTTAGAATTAAGCATTGTTTTAGATAGTCCAATAGGATTCATAACATAGGCTGTATAAAATTAGCCTCCACCTTCACTATCAAGCACAAGTTAATGGGATGAAAACATTTTCAGTCTCTCTCTGAGGTCTGTTGCAGAAAAGCAGGGGTAAAGAGACCATTAGCATTAGCAGTAACAGACATATTGCTTTATTGATCCCTTAGCCTCTAGAGTTTTTCAAAGAGAAAATGTTCAACTTAGATCCTTTTTCCCTGAATTAGAGCATCTCTGGGGAACAGAGGCCAGAGATGTATGGTTTGGTCAGAAAGAAGGGGTTTATAGGGCCACATTTTAAGATCTACTGTGCCATCAGACAGACTCTGGCTAAATTGCATTTGCATATTGATTCTATGATTTAATTTTTTAAAGTATGTGTTTTTAAAATGTTATCAAAATAATTCATTAGAAGCAAGATTTGGTAGAGTCTGGCTTGCCTGTTTTGTGTATAATAAAGTAGGTACCTTAAGATACATAACACCACCTCATTTTCTGGGCATTATTTCCTAACTTTTAATGTTTAAGCTTTTTGACCAGTTGTTTTGTATTTCAGATTTCAATCTGGATACAAAGTGAGGTGAACAAAATATATATATATATATATATATATATATATATATATATGCTTAATGAGGCTTAATGTACTTTCAGGAGCAATGTGTCAGAGAAAGATAGGACAAAGAAGTCAAACATTAAAGCCCTTCCATATATATATCAGAGGGCCTTAGATGATTACCAGAAAGCATTAATATGGAAGTCTGTAGCAAATTGATTTTTTGAGTGACTCTATTAGTTTGAGATTTAAAAAATTGTTTTAATGTGCCTTGGGCATCTTTCTAATTTATGCTCAGTGTTAACTTGGTCAGTTTACATTGTATTTATTAAGCCTGCTGCAAATCAAGTTTTAGGGAAGAAAATAAAAGATTATTTTAGGATAGAATGGGCTAGATGGCCTTTGAAGAACTTTGTTTACATCAAATTGATGAAATTTCAGATAGTCAAGGATTCCTTTCTGCTTGTGATACTTGGAAATTGACAAAGAGAAGTCTGATTTCCAAAATCATTAACATTTTAAAAAGTAGGTGTTCTTTGTTGGTTAAAAACATTTTCTGTCTTGCAGAGTGTCCTATTCCTTGAAGGAAGTATAACATATCCTTATGACACAGTTTCCTTTGTCCTTATGTTTGAATTATATATATTATAATTAAAAAATTAAAAATATATTTTTACTTGATTGAATATAGTTTGAATTACATATAATTCTATGTATATGTTATATATAGAGAGAATTCTATATGTTATATATATAGAATTCTAGATTTTAATCCTTGTCATTAAAAAAAATTTCCTAAGCATTTAATAGATAAAATAATTTTAACTTTTAAAAAGTACTAAGTAGTACTACAAAATTTGTAGTAAATGCAGATTACTTTGTAAAACTTAATAAAACAAAAAAGTTATCATTTGATATTGTGGCTTTTGTGTTGAAACCCTTATTTGAATTTACTGAGACTTTACATTAGAAGATACATACACACGTATGTATGTAAAAGTTAACAACTGTGAATCACTGCATTAGGTTCACTTAAAATGTTGGAGTTGCAAGTGTTTAAGAAAAACCTGCTTATTTTTAAAAGGGGTAGTTCTTTCTTAAAGTTTGGGTACAAATGGTTAAGCTTGTTTCAAACAATGGATGGTATTTAAATAATTTTTGCAATCCTATTCCTAGAAAATTATGGGCTTTGTGTCCTTAAAAGATATATTAAGATCAGTTATAGAGTCATTAGGAATTAGAAGACAGTAAAGTTAACTTCTTCAAAAACTTGTATTTTAAAGCTTGTCTTTTTCTGAGCCCTACTTGTTCAGTGGCCTGAAGAGTTCTTTAAATGAACCACTATTCAGTCATTAGTTTTACTAAAATTACCTACTTGGAATATGAAGCATACAATTAATTAGGTTTTCGAAATACCATGAAACAGGATACAGTCAAAGTGTTACAGAGTAAAGGTGGAGTTTTGGGAAGTCTGTATTTAAACGGTACATTATGATGGGAATCATTCTTATTTTGAATTACGTTGCTCAGGAAATCAGTATTTTTCTTCCAAGTATGTGCATATTGCACTGTTGGATCACAGAAATCTGAATGCTTTAATTATGTATGCAAATTATATAAAACTTTTGTATAATGTATTTTATACAAATGCAGCATGGAATTGTAGAATATTATGTTAGCATGTACATCTGTAAAACTGGGTTTTAAAACTTTCTGCCCCTTATTTTTCATATTTTAAAAGATATACAAAATGTAATAAAGTTTCTATTTTATTATTCAATCAAAAA EMBV3_10467 GAGGCATCTGCGTCTCCACGGCCAAGCAGCCTTGGAAATAATGTGACAGGTAAACCAAAT Gene GeneID:614276|MED10:NM_001034756:35_cdna Constitutive 1 NULL GeneID:614276 20 GENE MED10 MGC127590 mediator complex subunit 10 EMBV3_24967 CATCTATGCATATGGTGGTCTAAATGCATAAAATGTAAAATGTACTTAAGTCATTTCACC Gene GeneID:525262|FAR1:NM_001099032:143_cdna Constitutive 2 NULL GeneID:525262 15 GENE FAR1 MGC139098 MLSTD2 fatty acyl CoA reductase 1 EMBV3_35090 TTCCCAGTGAAGAGGCCTGTGTTTCTTTTCCAGGGGGGAGGAAATTGTCTACTGGAGGAA Gene BVV0102_263561 + 0 NULL GK000003.2:29563151-29618290 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43477 CCCCATGACAACCGACGTTGGGCCTCTGAGCATCCAGGATATCGCAATCCTCTTCAACAT Variant GeneID:514277|TMEM138:NM_001098967:85_cdna 260^500 1 EMBV3_38438 GeneID:514277 29 GENE TMEM138 MGC157057 transmembrane protein 138 EMBV3_14055 CCTCGTGGGCTGACTTTCTTCCCATGCCCACACACAGACTTGCAAACAGGAACAGTTTCA Gene GeneID:493988|SLC14A1:NM_001008666:35_cdna UTR3_Alt 2 NULL GeneID:493988 24 GENE SLC14A1 MGC127665 RACH1 UT-1 UT-B solute carrier family 14 (urea transporter), member 1 (Kidd blood group) EMBV3_03204 TCCAGCTGATGGAAATGCTCCAGCGAGCAGACCGGCTCACAAATATTTAGCTGTCCACAT Gene BVT0102_134086 + 0 NULL GK000024.2:21481850-21530899 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138603 TCONS_00138605 TCONS_00139865 TCONS_00138604 2 XLOC_084690 XLOC_085001 NonCoding TCONS_00138605 XLOC_084690 NonCoding NonCoding MIR187 24:21529516-21544648 o TSS103826 1813 1 TCONS_00138605_3 176 0.272476558190844 2 0.880311942369969 0.00389133050881128 0.00278404179966355 0.00263218050301628 0.000609331665916931 0.0009646328417834 0.000322208779789569 0.00128221680713841 0.00193966646542776 8.84701475756531e-09 0.000157405108765188 1.97292915796397e-05 6.10481200869325e-05 0.000411404833169865 0.000411419566187155 0.000415352153176939 0 0 0 0.00188883299710334 0.00331510173964471 0.000820993896840884 5.7296061905578e-05 0 0 0.0017004919761763 0.00214080549536716 0.00158518427574191 3.80355385314191e-15 8.50472724892224e-30 0.00038798844818097 XM_005212209.1 C10H14orf1 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf1 (C10H14orf1), transcript variant X1, mRNA. 4e-59 233 84.83 0.114726971869829 NR_029616.1 MIR187 Homo sapiens microRNA 187 (MIR187), microRNA. 2e-38 165 93.58 0.0595697738554881 0 noncoding 0 0 0 0 -0.00361722292175165 0.976648140144695 -0.0322425141689073 0.578318954095409 CCAGGAGATACAGGACAGAAAAGTGAAAGGAGTCTGGGGAAAATCTTATTTGGGGAATGTGTGCTCTGCGTGCACACACACTTAAAGACAATGGTGAGAATTCAGGTCACTGGAAAGAGCCCTTGTGAATTTTTTAGGTCCTTTAGGCAGGAAAAGGGATTTTTTTTTTTTTTTCATTCAAAATATTCAGTTTTAGGGCTTCCAAGGTAGCTCAGTGGTCAAGAATCCGCTTGCCAATGTGGGAGACCCAAGTTCGATCCTTGGGTCAGGAAGATCCCCAGGGGGAGGAAATGGCAATCTACTCCAATATTCTTGTTTGGGAAATCCCATAGACAGAGGAGCCTGGCAGGCTACAGTCCATGGGGTTGCAGAGTCGGACATGACTTAGTGACTAAACAACAACAATTCAGTTTTAAGTTTCTGTGTAAAATGTGGACATAATATTGTTATTTCTCTTCCTCCTAATTGGTGAATCTGTGGGATTCTTGTCTTTCACTGAGAGAAAACCATGTCTTATCGAATTTCTGCAGTTTTACTTAACATCTAAACTGTGTTAAAGCCTGTTGCCTTCTTGAACAAGGCTGATGGTCTGCATTATTGGAGCAGAAGTAGAATGAGCAAAGCCTCAGTTTATTCTCATGTCAATCCACGATTTCCGCGAAGAGTTTAGCCGACAGGGGCTCTGGAGGAGAAATTTCAATAGGTCACCTTTGGAGAAATTGAACTTGGGCCCTTTTAAAAAAATTCTGGACAGACCTCATTTTATTTTGTAAGAAAACCTAGAAATGACTCACCAAAAAGAATCCACATAAAAATGATATGTAGGAGTTTTTGAATAAAAATAAGCCATAAATAAGTAATAAATCCTTGATAGGCCCATTGAAAATGGATAGCAATAATGTTGTGTTTACTGCCTCACTCCCAAAGCACAGATATTTATTATAATTCAGGGCAATTCATTGTACTTGTCTGGCATTTATAAAATTCTCATCATAGTATTAGAGTAAGAACCCATTTCCTAGGAAGTATTGTTGTAATAAACTGTAATTAGTGGGTTGTAAACAGCCGTAATTCATTTTTGGAAGGAAAAGGCATGTGGACAGCTAAATATTTGTGAGCCGGTCTGCTCGCTGGAGCATTTCCATCAGCTGGACGCGCACCTGGAGCGCGGGGCTCCTGTAGGCCGCAGCCGGACTCCTCAGCTCCAGGCTGCCTTTCACGGAGACCACTGGTTTTTCCACTCGTTTTCTACTTCCACAGAGGACAGTCCCAGCGCTCCATCTCGATGCAGCCTCTGTTGTTATACAGCGTGCTCGTCCGGATAGCCAGCGAGAGGCACTCTTGGCGGCCCACCTGGAAGAGGAAGCGGGGCAGGTGCCCGCCGGCCGGGCTCCCCACGACACGGTGTGAGACCTCGGGCTACAACACGGGACCCGGGCGCTGCTCCGACCCCTCGTGTCTTGTGTTGCAGCCGGAGGGACGCAAGTCCGCAGCAGAGCCTGCTCCCCGCCTGCGCGGGACTCGGCAGCGGGAAGGAAGGAACAAGCATCTTTTAATTTTGTGGCTACAGTCGCCATTTCAACAGTGCGTGAACTGTGAAGAGAATTCCAGAAAAACATCTATTTCTGCTTCATTGACTATGCTAAAGCCTTTGATTGTGTGGATCACAACAAACTGGAAAATTCTTAAAGAAATTGGAATACCAGATAACCTTTCCTGTCTCCTAAGAAACCAGTATAGAGGTCAAGAAGCAACAGTTACAACCAAACATGGAATAACCGGCTGGTTCCAAATAGGGAAAGGAGTATGTCAG TCONS_00138606 s 5' 0 TCONS_00138606 s 5' 0 EMBV3_10614 GTGGTCCTGGAGGGAGAGAATTGCACATTTCAACGCAATTATACAGTGAGCCCCTTTAAC Gene GeneID:100298367|LOC100298367:XM_002690592:17_cdna Constitutive 0 NULL GeneID:100298367 10 GENE LOC100298367 NULL hypothetical protein LOC100298367 EMBV3_41950 TCTGACCAGCCCTTTGTATGATGGGTGATGCCGTACACTTGTGTATTAGGATTTAGTAGC Gene BVV0102_186378 + 0 NULL GK000005.2:80659414-80665378 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192696 TCONS_00192688 TCONS_00192677 TCONS_00192692 TCONS_00192685 TCONS_00192687 TCONS_00192695 TCONS_00192679 TCONS_00192681 TCONS_00192691 TCONS_00192690 TCONS_00192684 TCONS_00192682 TCONS_00192693 TCONS_00192694 TCONS_00192680 TCONS_00192689 TCONS_00192678 TCONS_00192686 1 XLOC_117247 Coding TCONS_00192693 XLOC_117247 Coding Coding ERGIC2 5:80632349-80662244 j TSS144141 3948 1 TCONS_00192693_2 159 9 0.868234428313374 4.68010759762726e-15 3.13723149756881e-44 4.02758630583158e-39 1.5956648531526e-05 0.000220343839862025 4.96610432590785e-26 2.18117219867289e-06 4.74511851679154e-05 6.76084829281995e-05 1.95773671335422e-15 1.57470635840163e-05 5.38179919557429e-08 8.66645973521912e-05 0.000112300676950494 1.78901461166124e-07 0.00125635084259204 1.31411256830515e-36 8.92049393241603e-05 9.71411155491695e-05 1.98938765479566e-40 5.68955130565808e-26 2.66709394326367e-09 5.15414825690886e-27 2.73488696122639e-31 3.79027578473998e-73 6.00495882228236e-21 4.66962172047981e-05 0.000147277876712823 5.25633493565656e-05 8.23653194359366e-05 NM_001075563.1 ERGIC2 Bos taurus ERGIC and golgi 2 (ERGIC2), mRNA. 0.0 1036 100.00 0.145136778115502 NM_016570.2 ERGIC2 Homo sapiens ERGIC and golgi 2 (ERGIC2), mRNA. 0.0 711 92.07 0.124366767983789 TCONS_00192693_2 sp|Q9CR89|ERGI2_MOUSE ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2; 8e-100 296 93.33 0.937106918238994 1 noncoding 0 0 1 0 0.0678699905705417 0.611546364545552 -0.0248878048824748 0.698714192366331 ATGGAGGATTAGAAGTAACTGAATGTGTGGAGGAGAAAAAGGAAGCCCTTAGGCAATATTTGATCTTTCACCACAGCAAAGAGAGTGGCAGAGGATGCTACAGCTATTTCAGAGTAGACTGCAAGAAGAACATTCACTTCAAGATGTGGTATTTAAAAGTGTTTTTAAAAGTGCATCAACAGCACTTCCACCAAGGGAAGATGATTCATCACAGCCTCCAGATGCTTGCAGAATTCGTGGTCATCTGTATGTCAATAAAGTAGCAGGGAATTTTCACATAACTGTGGGCAAGGCAATTCCACATCCCCGAGGTCATGCACACTTGGCAGCACTTGTCAACCATGACTCTTACAACTTTTCTCACAGAATAGATCATTTGTCTTTTGGAGAACTTGTTCCTGGAATTATTAATCCTTTAGATGGAACTGAAAAAATTGCATTAGATCACAACCAGATGTTTCAATATTTTATTACAATTGTGCCAACAAAATTACAGACATATAAAATTTCAGCAGACACCCATCAGTTTGCCGTGACAGAAAGGGCATGCTACATGGAATTGGCAAATTTATAGTTGAAATAATTTACTGTCGTTTCAGACTTGGAGCCTACAAACCTGTCAATTCTGTTCCCTTTGAAGATGGCCACACGGACAACCATGTACCTCTTTTAGAAAATAATACACATTAACACCTCCCAAGTAAAGGAGAAGAACTTTTTGCCTGAGACATAAAACCTTTTTTAATAATAAAATATTGTGCAATATATTCAAAGAAAAGAAAATATGAATGAGAAGCAGAAATCACACCTAGGGAGAAAAAAAAAGAAACCCAAACTGAAATCCTATATGTTTCGTGTCTGTTACAAATGTTCTAGAAGAAATTATGCAGCTAATCTAATCAGTGAATACGCCCAGCTGAGTATTGCTTTGAACATGACCCCTTCTGATATTTTCAGAGGAGATGGGCAGTACTGAAAGCAGACCTTGCTTCTTGATGACAAAGAGCCTGAAGGAAGAAGTCAAATCACATCTAAAGAAAATGGCATTGATAAGTGCAAATATTTTCATCTCTTTGTTTTTTTAAAGATATGATGTCAGAATAAAATATGTAAAACATATGGAAAACTAGTCTAGACTTTAAAAAGTGTGGTCAGGTCACATTGTTAATAAAGGAAAAGGCGGGGTCCCTATGTTATAGCCATATTACTGTTAAGCCATAATGACAAGACCATTTATCCAATTTTGGGTCTTAGGGTGGTAACTGCTTTTCTTTAAACTCTGGCTATTGACATTTCTGATTGTTCAAGGCAAAGTCATGAAAGACTAAGGTAAATACTTAGAAGGGCAGATGCTGTAATATGTAACAGAGGTAGATGCTGTAATATGTAACAGAGGTATCATTCACAAATTGTATAGTGGGCACGTATGCAGGGATAAGAAAGCACATTGTTAAAAAAAGATGCTAAGTTTCCTAATATGATCCTTATTCTTGTTATAGTTTGGGAACAGGGGATGAGTAATAAAAAGATCCACTGCTAATGATGGAAATTATCAGTTTGTAAAATATTAAGAGGAAAAGTAGCATTTTTTATGTGTTGTGGTAGTGGGCAACAGGGTAACTTAAAAATAGAAGTATGAGGCAAATATTTAAGTAAGACAATGTCAGATCTGAGAGATTATCATATTAAACTGTCATATTAAACATTAATATGATTAAATGTTGATCATATTAAACATTTAAACTGTAAAACTGTATTATGAAAGAACTATCTGCATTCAGTGTCCTGAATGTGATTGATTCTGTATTAGATTGTGTTGGTCTAGATTTCTTAACTATTTTAGGATTAATTTTAAATTTCTAGGTGATATAAAAGATTTAAAAAAGAGGGGTATATCACTCAGGTGCTGTTAAAACCTAAATTTGGAATATATGTGCCAACATCATTTTTCCTTTTGTAATGCTTTATAATGACAGTAGAAGAATCATCAACCAGTTCCTCATGGTTTAAGTCTTTTAGGGAAATGGGGAAACAAAAATTCCAGGTAAGTAACAAGACCAAGACTAAAAGACAAGATTTTAAATGGTTTTTAGAGAATAGGACACCACAAGTGAGAGTTTTTCAAATTCCTTTCTGTTAAAAGGTAAAAGAGAAAAATGTCCTGTTGAAAGCAGTTGGGGCAGATAATGGAAAGAAGAAGAAATACTGATAAAACTACTTTATAGTAAAGCTTATATAAGAATGCTATTTTGAAAATAATAAGCATCATTGTTTAAAATACACAGTTAATATGATTAAGAGCCATTAAGTTAACTAATATGTGACAAGTTTATGCTTTGAAAGATTTTCAAATTCAGAAAATTCCAAATAATGAATGGCCTTCTCATTATTTAGAAACTTCTGATTTCTTCAGATGTTATTTCCAGTGAAGGTAGACTGGGAAAAGGAATTTTTAATTAGAATTTTAGCTATTTTAGACTGAATGTTGGTTCTGTGAATCTGCTTGTCAGAAAATTCAGTTAAGTTTCAGGGTTATTTTAATAGGAAGAACTATTGATTTAGAATTATTTTCTTTCAATTAGGATTATAAAAGTTGAGTATCTTTAAGAAGGATTTTAAAAATTATTTTGGTACTTATATATGATTTTTAATTGTTACCGTTTTGTTTTCCAAATACCATATTAAAATTGTAATGGTATTAATCTGTCCCATTAAAACTGAGTATAAAAGGAATTTCATTGAAGCAAAATACTACTTTGCCATTGATTTCCATTTTAAAAGTTATGAAAGGTTTTCACCTGAAATCCCTCGAATAGTCAGGGTCAGATTTTGGGCGATCAAAGTATTAAGATTCTGACCAGCCCTTTGTATGATGGGTGATGCCGTACACTTGTGTATTAGGATTTAGTAGCAGTTTTTGACCTCACCAAGTGTTTCTTTTCCGTGGCAGAGAACACTGTACTGGCCTATCTATCTATGCCTCTAGTAGGGGATACCTGAGTTTATTACTCAATTTTTTATTTTATTAGGGCATTCATAGTATCTATGTGTATATATTCCATCCTAAATATTTTAATATTGAGATCTGGAATTATGTGAAATGAGTTTTCTTTTTCATCTGTGTTTGCATACATACAGCCTATAAAAAGAGATGAAATGTTTAAATGAAAAAGATGAATAATTCTCTGCTGCAGTATTTGTACACTTCAGACTACCTCTTGGGAAAAGCTTAACTCAGAATTACACATTTCTAATTCTTGACTTAGATGATTAATATTATGCTTTTCTCATATACATTTTATGATATAAAGCACTGAATTTTTGTAATAAAACTTTACTAACGACAGAGTTTATAATCTTTAATACAAGCTTTGGAATTCATAAAGGAATGACTAAGATCTAATTTTTTTAATGGTATAAAGACACATGTTGTACATTGTCTTTTGATGTCTTAGGTTAGTAATTCAGGTACCAAAAATTAAATGTACATGCAGCTCCTTTGTTTCACAATTTAAAACCTTTAAACTTAAGTTTGAGATGTGTGTATTTTTTAAATTACTTAACCTGAGCCTTAGGATCTTTAAAATCTCATCAGGCTTTAAATTAGTACTTAAGCTCTTCCCTGTCTGTCTGGAGGTCTAGCAAACCTTTAAGCCAAAATGAGTCACCCTTTGTCAGCACTATCCAAATAGATCACTACGTGTTCACTACCTTATGGTATGAAGCCTGGAGTAATATCCAAGTACTATTTATTTATTGTAATTCCTCCCACCCCTTTTGGAATATTTTAGTGATTAAATCAGCATTATTTTAAGAGTAGGAAACAAAATGCCTTGGATTTTTTTTTTCTTGTAGTTTTTAAAATTGTTTTAACAGAAAGAAAGACAAAAGACTCATTCAGTGTCTCAATTCTAAAGATGGGACTCAATAAAATAAATTGTACAATAA EMBV3_18211 GTAAGTTTTATAGAAACAAAACAGAAACGCCATTGCCTTAAAGAAGAATGTAATCATAGC Gene GeneID:506746|TRIP13:XM_002696452:53_cdna Constitutive 0 NULL GeneID:506746 20 GENE TRIP13 NULL thyroid hormone receptor interactor 13 EMBV3_03421 GGACCCTCGTGGGGCTTTATGGTTCAGCTTCAGCATCTCTGTTGTTTACATGTCTGTTCC Gene GeneID:517464|MKRN3:XM_002696472:8_cdna Constitutive 0 NULL GeneID:517464 21 GENE MKRN3 NULL makorin ring finger protein 3 EMBV3_23928 GTGGCGGAGGAGAGGCAGCGGTGTTCAGATTGTTTTATTTTGATTCATGTGGTGGATCTG Gene GeneID:513610|MED23:XM_002690223:16_cdna Constitutive 1 NULL GeneID:513610 9 GENE MED23 NULL mediator complex subunit 23 EMBV3_30787 ATGCCTGAACCGGCTAAGTCTCCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:614206|LOC614206:XM_002696342:20_cdna Constitutive 0 NULL GeneID:614206 20 GENE LOC614206 NULL similar to histone cluster 1, H2bd EMBV3_21621 TTTGGCAGCACTTCAAAGAAACTTCCCCTTACCTATTGCCATTGGCTGGAAAGGCCTCCC Gene BVT0101_015125 + 0 NULL GK000017.2:70316307-70331047 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076123 TCONS_00076122 TCONS_00076128 TCONS_00076126 TCONS_00076120 TCONS_00076121 TCONS_00076119 TCONS_00076127 TCONS_00076118 TCONS_00076125 1 XLOC_046739 Coding TCONS_00076118 XLOC_046739 Coding Coding HSCB 17:70305353-70319633 = TSS57212 4221 1 TCONS_00076118_2 235 0.311063728974177 6 0.704811261292808 1.1489117963432e-05 0.000301770619712966 9.27924962496637e-05 0.000226317045604427 5.35189367630508e-05 4.79461081935306e-09 4.9142109280345e-09 9.97637493051531e-07 4.71465401156106e-05 1.0836424959823e-30 2.64463072555549e-17 1.19836289312422e-29 1.45982668664428e-05 6.16388171396927e-19 1.37399066257943e-05 5.17052137313643e-21 3.22833217959807e-05 1.83938166141373e-80 0.000204593027776777 0.000692014904678746 3.33991925054848e-07 4.78843373117288e-06 1.36685518502151e-05 1.38085820526758e-05 9.71261313124505e-05 0.000642545656177313 2.97676362735271e-08 1.07558717419828e-19 1.81996986074382e-139 1.61291646620369e-06 NM_001102340.1 HSCB Bos taurus HscB iron-sulfur cluster co-chaperone homolog (E. coli) (HSCB), mRNA. 0.0 1427 99.87 0.1878701729448 NM_172002.3 HSCB Homo sapiens HscB mitochondrial iron-sulfur cluster co-chaperone (HSCB), mRNA. 0.0 940 87.10 0.183368869936034 TCONS_00076118_2 sp|Q8IWL3|HSC20_HUMAN HSC20_HUMAN Iron-sulfur cluster co-chaperone protein HscB, mitochondrial; 3e-145 410 84.68 0.995744680851064 2 coding 0 0 0 0 0.00507460029299869 0.972752014289366 -0.0138702074453484 0.785183712171725 GTTGTAGTTTAAGCTGCAGAGCGGGACTCAGAATCCAGGTTTCCCCCGAGTGGTCCCGCCCTCCGCCTAGTTCCCCAGCCAATCATTAGCACAAGTCTGGTCAGGCTCAGGTGACCTCGGCGAGGCAGGCCGCCGGCCCGATGTGGGGCGGAAGGACCGGGGCCTTTCTCCGGCCGTCGGGGTGGTGGCCGACAGGGGTGCTCGGGAGAAGACTGCTAAACTGCAATGCTGCGTCGCTGGCAGGAAGCAGCTCCCCACGATGTTGGAACTGCGGCGGCCCAGGGGGCCCACCGCGGGGGGACCGGTTCTTCTGCCCTCAGTGCCGCGCGCTGCAGCCACCTGACCCGACTCGAGATTACTTCAGCCTCATGGACTGCAACCGCTCCTTCAGAGTTGACACTGTGAAGCTCCAACATAGATACCAGCAACTACAGCGCCTTGTCCACCCAGATTTCTTCAGCCAGAGGTCTCAGAATGAAAAGGACTTCTCAGAGAAGCACTCGACCCTTGTCAATGAGGCCTATAAGACCCTTCTGGCCCCCCTGAGCAGGGGACTATACCTTCTAAAGCTCCGTGGAATAGAGATTCCTGAAGGGACAGACTATGAGATGGATAGTCAATTCCTCACGGAAATAATGGAAATCAATGAAAAACTTGCAGAAGCTCAAGGTGAAATTGCCATGAAAGAGATTGAATCTATTGTCAGAGCTAAACAGAAAGAACTGACTGACGATGTGAGCAGAGCTTTTGAAAGAGACAATTTTGAAAAAGCCAAGGAACTCTTAACAAAGATGAGATACTTTTCAAACATTGAAGAAAAGATTAAGTTAAAGAAGATTCCCCTCTAATGGTTGCTAATTTTAAAGTTTTAAAAAATAAAGTTCTAGTGATTTCTCTCCTGGCTTCTGCAGACTGAGAACAGAGGTGCTTCAACCACTGTGACCGTCTTAACTAACCTGTGGCTCAGGCACTAGCGGGCGGTAGCGTCTGTCATGTCAGCGGAAGCACAGCCTAGCCAGGGTTTGAGTGGTTGGCTCTTCACGGGGGACTTGGTATACCATGTCCCCCAGCTAGGCTGGTGGATGAAGAGATGCAAACAGGGCCAACCTGAGGCCCTCAAGAGGACAGGACTTTTTCCTGAAAAGGCCAGTAGTAAACATTTTAGATTTTGTGGGCCTCCTCCTCTGCTGCGACTACTCAACTCTGCCCTTGTAACATGTGCATGCTACGTGCGTACTAAGCTGCGTCAGTCACGTCCGACTCTTTGCGACCCTATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGGATTCTCCAGGCAAGAATAGTGAAGTGAGTTGCCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGGATCGAACCCACGTCTCTTACATCTCCTGTATTGGCAGGCAGGTTCTTTACCACTAGCACCACCTGGGAAGCCCTTATAGCATATTATTTACTAAGCAGGCAGTGGGTTAGATTTGAAACAGGTTTACTACCCTCTGCTCTAGAACCACATCTTCCTTCCAAAGGCATGACCTTCACAAATAGTCTTGTTAGTATGTCTTTCAGGGAATTCCACTTTGAAACCATGCAAACTGCCTAAGGGTCTCTTTGGTCCACACTTAAATAAATGCATTTCATCTACATGAAATATAGATAATTTTACCAAGACTTAGTCTGGTATGAAACACCGAGCACATTTTCAGCTCCACCTTGGTGGAGCAGAGCGTTTTTAATCTGTTCCTGGACAACTGCTCTCCTGTCACCCGAAGCAGCTTCTCTCCCCTTTGTGATCTTTGGAAATTCAGTTTAAAGTTGATTCATTTCCAGAAGAAAAAAAAAATTTTTTTAAGTCTCTAGATCAAGGAAGATTAAAATAGAAAATTCTGAGAAACAGCATTCAAACTCTTAGAACTGCTTGTTTATAAATGAAAAAAATTCAGGGTTCTGAACCAAGGTTTAAATATTACTCCTAGAGCTTAAAACTGCAGCTCCTAGGGCTTTCCTGGTGGTCCAGTGGCTAAGACTCTGCGCTCCCAAGGCAGGAGGCCCGGGATCAAGGCCCGGTCAGGGAACTGATCCCATATGCTGCAAGTAAAGATCCTGCATGGTACGACTCGGCACAGCCAAATAAATAAATTTAAAAAAAAATTTTTTTTAAAGAAAAACTGGCGTTCTTTTGCATCTTCCCTCATCACTGTCTTAAGAATTTATATCTTGTGAATCCGGTTATACTCAGTTAATGTTTCAGGATTTATGGATCTTTCTAAAGGCAAATGAACCACAGCAGCTGTCTGGCTTAATGGTATTTAGGAATATCAGTACAATCTCCAAGCCCCTCATAATTTACAAGAAGAATGAGTTACTTGTCTGAACATGCACAGGAAGTCCTTTAAGTAAATAATTACAAAGCAAGCAAAAAGTCCTGATTAGACTGGGTGCTTCTGCTAAGAAGGAAACGAAAGGAATATTCGAAATATGCTGTAGACAATTTTCCATCCTTCCTCAGAACAAAGATCAAGACTGAAACTATCCGACCACAAAAAGAAATCAGATCAACGAATTTGCTTCGAATGACATTTTTGGCAGCACTTCAAAGAAACTTCCCCTTACCTATTGCCATTGGCTGGAAAGGCCTCCCAGCAAACCATTTCTGATCAGGGGAATAGATAGAAAAGAATATTTCTGGGATTTCCTTGGTGGTTCAGGGGCCAAGACTCTGTGCCTCCAATGCAGGCGGCCTGAGCTCAATTTCCGGTTAGGAAACCATCCCGCATGTTGAAACCACAAGTTTGCCTAGCACAACCAAATATCCCTCATCACTGTCTTGTGAATTTATATCTTGTGAATCCAGTTATACTCAGTTAACATTTCAGGATTTATGGATCTTTCTAAAGGCAAATGAACCTTGAGGCAAATGAGCTGCATGCTGCAACTAAGACCTGGGTGCAGCCAGGCAAGCAATTTTTTAAAAAAGAAAAGACTTTATCTCTGAGACATGGTTTCCCCTCTCTTCCAAATTCTTTCCCTTTTAGTCTAAACTCCAAGTATAGCCGAACTTCTCAATCCAGAAGCCCGCTCAAGTGTTCCCTGACAAAGCCCTCTAGAGGGATGCTTCAGGACCTCTGAAAGCTTAGCAGTCCCACTTGGGTTAACATATCTGACCGAGGGAAGGAAATTAAGCACCTGCCTCCCAGCCCCACGTGGTTCCTAATATAATGGTAGAACAAGTCAAGGGGTTGAGTGATTTGTGACCATTTGCTCTGGTGTCAGACGAACCTGGTGTTATGGACAGAACATGGCTCCCCAAAATTTGTATGTTGAAGCCCTACTTACACTGTGGGCTGTATTTGGAGATGGTGCCTCTAGGGAAGTAACTAAGGATAAATGAGGTTGTAAAGGTGAAGCCCTGATCTGACAGGATGAGTGTTCTTACAAGAAAAGACACCAGAGAGCTCCCTTGCTCAGTCTTTTCACAGTCATGCACAGGGAAAGGCCCCAACAGAAAGCCAGGGAGATGCCCACTGTCTATAAACCTACTGAAACTGGCCCTGATGGCAACCTTGATCTTGGACTTCCAGCCTCCAGACCATGAGAAAATTAACTTCTGTTGTTTAAGACACCCAGTCTGTGGTATTTCGTTACAGCAGCCTCAGTAGATTATTAATAATATGCCTGGTTTTGAATTCCAGCTCTGCCGCTAATTTGCATGAGTCCACAGTTGTGCTAAGCTTCATTTCCTCATCTTCAAAACAGTGATGATAGCGGCTTCCCTGGCGGTCCAGGGATTGAGGCTGCGCTTTCAATGCAGGGGCAGGGGGTGCAGTTTTGATCCCTGGTCAGGGAACCAGGATCCCACATGACACGGTGTGGCCAAAAAACGAACAAAATCACACCTACACAATAATTCAGTAGGTTCCTTTAGAACTCCCAGTGGATGTGAAAGCCCACAGGAGTATGAGTGGCTGGCCTTCCTATTGGCTTTCTTCTAATGCCCAGCGCAACGGCCAAAACAAAAATGGTGATAAAGATAATAGCACCGCGCTCACAAGGTTGTTGTAAAGAGTAAATGGAATGAATTGTCCATGCAAACTGTTTAGCACCGTGCAGGGCATGTAATCACTCAAAGGTGATTTTTTAAATGGTAATGACTTCTGTGGTTTTTATTTTGCAACAAACTCATGCCTTTTGCTACAGAGTAAAATATCC EMBV3_23342 CAGGGTTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTC Gene BVT0102_376370 + 1 EMBV3_40856 GK000003.2:53862658-54031911 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25940 CCACTCTTACTAACACCTGACGGTAGCTACCCCTGAGCGGGTTACTCTGGATGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_25461 TCGGAGGCCTGGTGAGAGACAATGGCCAAGAACAAACTAACAGGCCAGATGTCCTGGAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39281 ATGAACAGCAGGATTGTGAGCCTGGGAGAAGGCAAAATCTCTGGAACTGGTTGGTCCAGT Gene GeneID:614402|LOC614402:XM_002699376:325_cdna Constitutive 0 NULL GeneID:614402 29 GENE LOC614402 NULL similar to HRAS-like suppressor 3 (H-rev 107 protein) EMBV3_03525 GGCAACCTGTGCTGGACCAAACTACTGATTTGAAAGGCATGGCAGATCTTGGCAGGAAGG Gene BVV0102_235576 + 1 EMBV3_01812 GK000001.2:117546174-117548525 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004971 TCONS_00004970 TCONS_00004974 TCONS_00001904 TCONS_00004972 TCONS_00004969 TCONS_00004973 TCONS_00004968 2 XLOC_001153 XLOC_000465 Coding TCONS_00004968 XLOC_001153 Coding Coding MED12L 1:117545514-117692609 j TSS2463 6070 1 TCONS_00004968_5 1311 31 0.958944620446789 2.25099734672196e-142 7.72327102083205e-45 5.09281225658998e-89 7.92486015954518e-05 5.44817043785852e-177 1.33629284022654e-97 3.74679921639224e-45 1.99984353064617e-29 2.15020866588007e-44 1.21784668498103e-30 0.000132763454294731 1.23689723586807e-103 8.05744148725652e-94 1.10720500751517e-29 6.43477442436487e-18 0.00020575083788226 0.00337806230519053 5.45314896352549e-05 4.24503565190269e-21 8.77695500261438e-127 2.53296028293732e-19 0.000118062504157445 1.98034604683544e-05 0.000187049039329714 3.24805342711916e-23 7.56791305102477e-73 2.94176428512114e-12 0.000234484792048322 0.000129769258033507 0.000108597433219527 XM_005201808.1 MED12L PREDICTED: Bos taurus mediator complex subunit 12-like (MED12L), 0.0 7909 100.00 0.722240527182867 XM_005247096.1 MED12L PREDICTED: Homo sapiens mediator complex subunit 12-like (MED12L), 0.0 7048 89.48 0.870840197693575 TCONS_00004968_5 sp|Q86YW9|MD12L_HUMAN MD12L_HUMAN Mediator of RNA polymerase II transcription subunit 12-like protein; 0.0 2424 96.03 0.999237223493516 1 coding 0 0 0 0 -0.130439738192611 0.299151279210099 0.0325676073898349 0.672157331692528 GCTGCCAGGGTCCGAGACGGGCGTCGGAGAGGATTTTAAATGGAAGCATGAGCGTCATTATCAAGTCAGCCACCAAAGTGTTTTTGAGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTTTATGGAGTGGGAAAAGAGCGTGACGAAGCCAGACATCAGCTGAAGAAGATTACCAAAGATATTTTGAAAATCCTAAATAAGAAGAGCAACACAGAGACAGGGGTTGGAGATGAAGGACAGAAAGCCAGGAAGAGCAAACAGGAAGCATTTCCGACCCTGGAGACTGTGTTCACAAAACTTCAACTCCTTTCATATTTTGATCAGCATCAAGTGACATCTCAGATTTCTAACAATGTGCTAGAACAAATCACAAGCTTTGCATCAGGAACATCATACCATCTCCCATTGGCTCACCACATTCAGCTCATCTTTGATCTCATGGAGCCAGCACTTAATATTAATGGACTCATTGACTTCGCAATACAGCTCCTGAACGAACTGAGTGTTGTGGAGGCAGAACTGCTCCTGAAGTCCTCCAGCCTGGCAGGAAGCTACACGACAGGACTGTGTGTCTGCATCGTGGCTGTTCTCAGGCGTTACCACAGTTGTCTGATCCTGAATCCTGATCAGACAGCCCAGGTGTTTGAAGGATTGTGTGGTGTGGTAAAGCACGTTGTGAACCCCTCAGAGTGCTCTTCCCCCGAAAGATGCATCTTAGCCTACCTCTACGACCTCTACGTGTCATGTAGCCACCTCAGAAGTAAATTTGGAGACCTCTTCAGTAGTGCCTGTTCAAAAGTAAAGCAAACCATATATAACAATGTGATTCCTGCAAATTCTAACTTGCGATGGGATCCAGACTTCATGATGGATTTTATTGAGAATCCCTCGGCCCGTAGCGTCAACTACTCAGTGCTGGGCAAGATCCTTAGTGACAATGCAGCCAATCGCTACAGCTTCGTCTGCAACACTCTCATGAATGTATGTATGGGTCATCAGGATGCTGGAAGGATTAATGACATAGCCAATTTCTCCTCCGAGCTGACAGCCTGCTGCACTGTTCTCAGTTCAGAATGGCTGGGGGTCCTGAAGGCTCTTTGTTGTTCTTCAAATCATGTGTGGGGCTTTAATGATGTTCTTTGCACTGTCGATGTGAGTGACCTTTCATTCCATGATTCATTAGCTACTTTCATTGCTATTCTGATAGCACGACAGTGTTTCTCCCTGGAGGACGTCGTGCAACACGTCGCACTCCCCTCTCTCCTCGCCGCAGCTTGCGGAGATGCAGATGCAGAGCCTGGGGCAAGAATGACATGCCGTCTCCTGCTTCATCTCTTTCGAGCTCCCCAGGCCTGCCTGTTACCTCAAGCAACTGGCAAACCTTTCCCGGGAATAAGATCGTCTTGTGACAGACACCTCTTAGCTGCTGCTCACAACAGCATTGAAGTGGGAGCCGTGTTTGCTGTCTTAAAAGCAATTATGATGCTTGGAGATGCCAAAATTGGCAATAACAGTGTCAGCTCTTTAAAAAATGATGACTTCACCATGAGGGGTTTACGACGTGATGGGAATGCTGAGGATATCTGGACTGCCTCACAAAATTCAAAATCCTGTGGGAAAAGCATTTCCATAGAAACGGCCAATTTAAGAGAATATGCTAGATATGTACTGAGGACCATCTGTCAACAGGAATGGGTAGGAGAACATTGTTTAAAAGAACCTGAGAGATTATGCACAGACAAAGAACTTATTCTGGACCCTGTGCTCTCAAATATGCAAGCACAGAAATTACTGCAGCTGATCTGTTATCCTCATGGCATTAAGGAATGTACGGAGGGGGACAACCTCCAAAGACAGCACATTAAACGCATTCTTCAGAATCTTGAGCAGTGGACGCTGAGGCAGTCCTGGCTGGAGCTTCAGTTAATGATCAAACAGTGCTTGAAGGACCCTGGCTCTGGTTCGGTGGCTGAAATGAACAACCTGCTGGACAATATTGCCAAGGCAACAATAGAGGTGTTCCAGCAGTCCGCTGACCTAAACAATAACTCTTCTAATGCTGGCATGGGCCTCTTCAACCCAAATGGAATTGGAAGTACTGATACAAGTAGCACGAGACAGAATGGAATAAAGACATTTCTAAGTTCCTCTGAACGCAGGGGTGTGTGGCTGGTGGCCCCCCTAATTGCCAGGCTGCCGACTTCTGTGCAGGGAAGAGTGTTGAAAGCAGCTGGGGAAGAGCTGGAGAAAGGACAGCACTTGGGTTCTTCTTCCAAAAAGGAAAGAGACAGACAAAAGCAGAAAAGTATGTCTCTTTTGAGTCAACAACCATTCCTCTCACTGGTCCTTACCTGCCTTAAGGGACAAGATGAACAACGAGAAGGCCTTCTAACATCTCTGCAGAATCAAGTTAACCAGATTTTAAGTAACTGGAGAGAAGAACGATACCAGGATGACATCAAAGCACGACAGATGATGCATGAGGCATTGCAACTCCGCCTGAATTTGGTGGGAGGAATGTTTGACACAGTGCAGAGGAGCACCCAGTGGACAACAGACTGGGCGCTTCTCCTCCTTCAGATCATTACTTCTGGAACCGTTGACATGCACACCAACAATGAATTATTCACAACAGTTCTTGACATGCTGGGTGTTTTAATCAATGGAACATTGGCCTCTGACCTGTCGAATGCATCCCCAGGGGGATCTGAAGAGAACAAACGTGCATACATGAACTTAGTCAAGAAACTGAAAAAAGAGCTGGGGGACAAGCGGTCAGAAAGTATTGACAAAGTTCGACAGCTGTTACCTTTGCCGAAACAGACATGTGACATCATTACCTGTGAACCTATGGGCTCCTTGATTGACACAAAGGGAAACAAAATTGCTGGCTTCGATTCTATAGATAAAAAACAGGGTCTCCAGGTCTCCACGAAGCAGAAGGTGTCCCCGTGGGATTTGTTTGAGGGTCAGAAGAACCCGGCTCCTCTGTCCTGGGCCTGGTTCGGGACTGTCCGAGTGGACCGGAAGGTGATCAAGTATGAGGAGCAACATCACCTCCTCCTGTATCACACGCACCCCACGCCCAAGCCCCGGAGTTACTACCTCGAGCCACTGCCCCTGCCTCCCGAAGAGGAAGAGGAAGAGCCCACATCTCCCATCTCTCAGGAACCTGAGAGGAAATCAGCTGAGCTGTCAGATCAGGGAAAAACCGCAACAGATGAAGAGAAGAAGACAAAGGGAAGGAAGCGCAAGACAAAGTCCAGCTCAAGGGTTGATGAGTATCCGCAGAGCAGCATGTACCGAGTGCCTCCCAACTACTCACCCATCTCCTCCCAGGTGATGCACCACCCGCAGTCCGCCCTGTGGGGCTACAACCTCATGGGTCAGCCCCAGCAGCCCGGCTTCTTCCTTCAGAACCAGTCTGTCACTCCAGGTGGTTCCCGGTTGGACCCCGCTGGCTCCTTCGTCCCCACCAACACCAAGCAAGCTTTGTCCAACATGCTCCAGCGGCGCTCGGGGGCCATGATGCAGCCGCCCTCTCTGCATGCCATCACATCGCAGCAGCAGTTGATACAGATGAAGCTTCTGCAGCAGCAGCAGCAACAGCGGCTTCTCAGGCAAGCCCAGACGCGGCCTTTCCAACAGGGCCAGCCAGGGGACCAGGCTGCTCTCTTTGCTGCTCAGGCACGGCCCTCCCCTCAGCTCCCCCAGTATCCAGGACTGCAGCAAGCACAGACCATGCCCCAGGGCTACACAATGTATGGAACCCAGATGCCTTTGCAGCAGACCCCTCAGCAGCAGGCTGGCAGCGTGGTCCTGTCTCCTACCTATAATTCCAGAACCTATCCGGCCGCTCACTCCAACCCAGCGCTCATGGAAAGACTCAGACAGATGCAGCAGCCGCCGAGCGGCTATGTTCAGCAGCAGGCGTCACCATACCTGCATCCCCTGACCGGCTCCCAGAGGCTGAATCATCAGTCGCTTCAGCAGAGCCCTCTGGTGGGTGGAGGAATCGATGCGGTGCTGACTTCCGCACATCCAAACCTTCCCTCAGTGCCCTTGTCTCAGGACCCGATGAGACCCAGACAGCCACAGGTTCGACAGCAGCAGAGGCTTCTCCAGATGCAGCAGCCCCAGCAGCCCCCCCAGCCCCAGCAGCCTCCCCAGCCTCAGGGGTCCTCGCAGACCCAGAGTCAGACCCTTGGTCTCCAAACAATGCAGCCCCAGCAGCCTCTGTTCCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAACAGCAGACGGCTGCCCTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGTAACCAGCCACAGCAAGGAGTGACTCCCTACGGGCATCCTTCACACTTCTGAGTCTGGAAGAGGACAAAGATACAAACTTTTTTGTTTGCACTGAAAAATAGAAAATCACATTTACTGCATTAGTCATCTTTGGAAATGTCTGTTTTTTCATTTCTTTAAAAGTTTTCCTGTATTTTACGCCACATTTCATACAAAGGTGTTGAAACAAAAAGTAAAGGAAAGGGTGTGGTTTGGTTTCATTTCATTCAACTTGAAAAGTAGGTTTAAAAATGTAGACGTGTGGGCCTACTGCAGGAGGAGTTTGGTAGCAGACTTTTTAAAATTGGTGCTCTTACTGAATCTCGTAGTTATAGAAAGAAGGAATTATGGTGGATTTAAAATATTTATGTATCATTGATGGTTTTTTTTTTTTTTTTTTTGGCAACCTGTGCTGGACCAAACTACTGATTTGAAAGGCATGGCAGATCTTGGCAGGAAGGTGATCCATTTACTCTGCAGTCACCTTTGGTGGTGAAGTGGACATGAATTTGCATTGCTCTAATTTAAAATATTTGTAATTTCATAAGCACTTTATGAACTTCGTTCTTATTTATGTAGGATTTTTCTTTGCTTTTGTTGTGGTCAAAAGGTGCTGAAACAGATTGTTGCTTAGAACTTAAACTTCTTAGACCAAGAACTTAACCCAGGGCTTCTGTGAGAGCCACCCTGAGGTACACGGAAACCCGTTAGGAGTAGCTGTACTAAATTTTTCCATGGCAAGATCATTGACCAGAGTCTTTGTGAAGGTACAGCATGTAAATTCTAAAGGCCGGAATGAACCACAGTGGAATCGATCCAACTGTTTGCCAGATTTGGCAAAAATGACTCTGTCCAGTTTTGGTTCTCCTGAACCTGTATGCCAACTTGAGGGGAAAAAAAATCTCGCAGCTGGCCTGAGATTCCACAGTGCTCAAACTTGACATGGTTTCCAGAGTATGGCCCCCAAGTCCAGAGGGCTCTGGTTTTCATAAGAGATGTATTTGCTGTTTATTTTATATGAATATGCATTAATTTATCTTGAAATGATCACAAAGGATAACTCTGTCCTTCGGAAAAACCTGGTAATTTGCTTGGTGAGACAGAGAGGAAGTTATCTTAGGAAAAATGGAGCCCTCAGTTCCCGTTAAAGACTTTGAAATAGAATGGAGCTTGACATAGGAAGCCCTTTCATATACCTGTTTACACTGTAGGCCCCTCCCTAAAAGGGTTCCATTTATCCTCTGATTGATCCTTCTTGGCCCGGAAATAGAATGAGATCTCTGTTAGAATGAGTATCCTTTGACCACTTGTGGTCACCGGATACCAAAACCAGAGAAAGTAGGAAACAGGTTACCTCTTAAGGTGGAGCAAGCCGAAACTTGGTGTGATGAAGACACAGTGAAGCGTCCCCCACCCCCCATCTTCCTAAAATGATACACAGGGGCAAACGTAGTTCTCAGTTTTGTGTGCTGAGATACTTGAGCAAAACTGATGGCGTTTTCTCATTTTTCATTTATTAAGGCTCCTATAATTCTTCTTAAATAATAGACAAATATTTAAATAGATGCTGGAGAAATTACACTGGAAAATGCTAGTCTCTAGAGTTAGAAAAGATTAATCATAATGTCCTTAAATTAATTCAGGTTGAATTAAGCACGTGATATAAATAAATTCAGTGAATTACAAAAAGTAAGATTTTGTAGAGATGATCAGTAC EMBV3_11847 ATCTCTTTGGGGATGCTGACGCAGGCGGCCCCGGCCCTCGATTTCTCCCTCAAGCTGTTT Gene GeneID:614254|QPRT:NM_001035446:392_cdna Constitutive 0 NULL GeneID:614254 25 GENE QPRT MGC127779 quinolinate phosphoribosyltransferase EMBV3_38746 CTGAACTCATGATGGTGTGAGAGGTTGGCTTGGGAGGTAGCAAAGTCTGTGTTGTGGGAG Gene GeneID:507021|SLC25A30:NM_001098895:52_cdna Constitutive 0 NULL GeneID:507021 12 GENE SLC25A30 MGC166044 solute carrier family 25, member 30 EMBV3_16924 CAACGTTCTGCCCTTCATCAGCATCAGAGACTTCACACTGGTTCAAGGCCTTATAAGTGC Gene GeneID:789960|ZNF154:XM_002695508:307_cdna Constitutive 0 NULL GeneID:789960 18 GENE ZNF154 NULL zinc finger protein 154 EMBV3_07844 CAGTTCCGCACAGAGAATAATGGAGGACAGATTGTAATGCAGATAATAGCAAGACGGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22047 CTGGGCCAGCCTTCAATGCCACAGAAGACCATTCCAAGTGGTGTGTAACCCCAAAAGGGC Gene GeneID:282218|DNASE2:NM_001075127:8_cdna Constitutive 3 NULL GeneID:282218 7 GENE DNASE2 MGC140819 deoxyribonuclease II, lysosomal EMBV3_04962 GGCTTGGGTCAGGAGAGGCTGACAGGAGAAGAAGGAGATGAAGAAAACAACTTGGGCAAT Gene BVV0102_272459 + 0 NULL GK000030.2:126368266-126397965 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00254088 1 XLOC_157026 NonCoding TCONS_00254088 XLOC_157026 NonCoding NonCoding - X:126393498-126394189 - TSS191309 691 0.680173661360347 1 0 0 0 0 0 0 0 0 0 0 5.95440466265572e-06 0 0 0 0 0 7.64446678251527e-05 0 0.000508356281225974 0 0 0 0 9.29352911500726e-05 0 0 0 0 0 9.83566355501155e-05 2.61023360631672e-05 XM_005193167.1 ZNF239 PREDICTED: Bos taurus zinc finger protein 239 (ZNF239), mRNA. 2e-33 147 71.67 0.38205499276411 XM_005262612.1 GEN1 PREDICTED: Homo sapiens GEN1 Holliday junction 5' flap endonuclease (GEN1), transcript variant X1, mRNA. 8e-13 78.8 80.72 0.118668596237337 0 noncoding 0 0 0 0 0.13897565209766 0.244799013149163 0.0189904321731431 0.750973940284641 GAGCTTTCTTAAGTGCTACCACCCTTGGAGCCACAGTTCCTGCTGTGGAATGGGAGGGAAGGGAGGCTTGGGTCAGGAGAGGCTGACAGGAGAAGAAGGAGATGAAGAAAACAACTTGGGCAATAAAAGGGCAGGCTTAGCATAATATTAAAACTAGAAAAATGGGCAAGAGTGGGGAAAAGTAGAGATTAATGACTCCTAGGCACAGCAGATAAGAATCTGCCTGCCAGTGCAGGAGACTCAGGTTCAATCCCTCGTCTGGGAAAATCCCACATACTGCGGAGCAGCTAAGCCTATGCTTTAGAGCCCTGGAACTGCAACTTCTGAGCCTGTGTGCTGCAACTTCTGAAGCCTGCTCACTTAGTGCCTGTGCTCCACAACAAGAAAAGCCACTGCAATGAGACGTTCCTGCTTCACTGCAGCTAGAGAAACCCCACACAAAGCAATGAAGACCCAGCACAGCCAAAATAAATAAGTAAACTTAAAAAAAAGTTAATGACACCTAAAGTACACGAAGCAGAATAAAAAATAAACAAGTGAGACTACATCAAACTCAAAAACTGCTGCACAGCAAAAAAAAAAAAAAAAAACACCATCAACAAAGTGAAAAGACAGCCTATGGAATGGAAAAAAATGTTTGCATACCATGCATCTGATAAAGGATTGATATCTAATACATAGAAAGAACACA TCONS_00245663 . 5' 3777 TCONS_00245663 . 5' 3777 EMBV3_13813 GGAAGGTGCACGAGGCCCGGGCCGGTGTCCTGGCAAGCGGAGGAGGCGGCCCGGGAAGCC Variant GeneID:516004|MRPS26:NM_001034514:1096_cdna 294^424 1 EMBV3_26017 GeneID:516004 13 GENE MRPS26 MGC128354 mitochondrial ribosomal protein S26 EMBV3_26290 ACAAGATCCAGTCATCTGGGGGCCCACTGCAGATAACAATGAAGATGGTGCCAAAAATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05995 TATGTTCTTCTGCCGAGGATGGAGCGTCGGAAAGGCCACAGACTTCGCAGCTTCTTTAGC Gene GeneID:533574|ZFAND1:XM_002692835:198_cdna UTR3_Alt 6 NULL GeneID:533574 14 GENE ZFAND1 NULL zinc finger, AN1-type domain 1 EMBV3_16819 GAGTCTTTGGTGCCGGCTTACTTTCTTCCATCAGTGAACTCAAACATGCTCTTTCTGGAC Gene GeneID:781941|SERGEF:XM_002693039:304_cdna Constitutive 0 NULL GeneID:781941 15 GENE SERGEF TPH1 secretion regulating guanine nucleotide exchange factor EMBV3_24026 GGCTGACGCAGGAACCCGAGAGCATCCGCAAATGGAACCAGCGCCAGAGTGAACAAGTTG Variant GeneID:281698|CLTB:NM_174277:81_cdna 456^554 1 EMBV3_12363 GeneID:281698 7 GENE CLTB CLTLB clathrin, light chain (Lcb) EMBV3_30697 CATTGATTCCCAAACATCTTCAAATCTGGACATGTAGAGCCTGCCTCAGCTGGTTTTTCA Gene GeneID:516545|C13H20ORF108:NM_001080278:1099_cdna Constitutive 1 NULL GeneID:516545 13 GENE C13H20ORF108 MGC151880 chromosome 20 open reading frame 108 ortholog EMBV3_42097 GTGAGGAAGGTACTTGAAATGTACCAGTCACTGACATTGTCTTACATTGAGAAATCCATT Gene GeneID:280759|DBT:NM_173905:8_cdna Constitutive 0 NULL GeneID:280759 3 GENE DBT E2b dihydrolipoamide branched chain transacylase E2 EMBV3_39020 TGATGTTTTATGTTTGGGGCTCACGCTCTGGGCCGGTGGCTCCATGGTTCTCATTCTCTA Gene GeneID:787174|BOSTAUV1R414:XM_002695270:12_cdna Constitutive 0 NULL GeneID:787174 18 GENE BOSTAUV1R414 NULL vomeronasal 1 receptor bosTauV1R414 EMBV3_24580 ATCTGGAGCCTCTCGCCTCCCGTGACCTAGAAATGGTTTCTGTGGCCAAAGTTTGCTTTT Gene GeneID:510748|PLEKHA4:XM_002695115:600_cdna Constitutive 0 NULL GeneID:510748 18 GENE PLEKHA4 NULL pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 EMBV3_39077 CTGGAAAGGGCCAGCAGCAATGTGTTCTTAATTCCTAGCACCTGCTATCGAACTGTGCCT Gene GeneID:505220|PTPN9:XM_002696630:167_cdna Constitutive 2 NULL GeneID:505220 21 GENE PTPN9 NULL protein tyrosine phosphatase, non-receptor type 9 EMBV3_03168 CTACGCCACTACCTCAGAGCTGAGGCATCAGTTCCATCGTCACACGGGGTGGACACTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07870 GCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCGCAGCTATTCTTGGGATGCAC Gene GeneID:533257|TMOD3:NM_001075987:86_cdna Constitutive 0 NULL GeneID:533257 10 GENE TMOD3 NULL tropomodulin 3 (ubiquitous) EMBV3_14818 CTGCTCTTTGACCTGTCTGAGGACCCTGGTGAGAACTACAACCTTCTGGACAGTGTGGAT Gene GeneID:505514|ARSA:NM_001075205:13_cdna Constitutive 0 NULL GeneID:505514 5 GENE ARSA MGC142847 arylsulfatase A EMBV3_08412 CTCGAAGCGCAGCCTCTCCAGTTGAGCTTGTGTTTGGTAGCTATGTGCCTTCATTTGCAA Gene GeneID:537291|LOC537291:XM_002690041:11_cdna Constitutive 0 NULL GeneID:537291 9 GENE LOC537291 NULL similar to Uncharacterized protein C6orf152 EMBV3_15193 CAGCTAGTGCATAGAACAGTGCTAGGTACACAGCAGGTGCACAATAAATATCTGCTGAAC Gene BVT0102_327938 + 0 NULL GK000007.2:55085381-55222499 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221363 1 XLOC_134679 NonCoding TCONS_00221363 XLOC_134679 NonCoding NonCoding - 7:55113925-55114215 - TSS165361 290 0.220689655172414 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000148788316191925 0.00130850578820101 0 0 0 2.38912511467398e-05 0 4.0407956179829e-05 0 0 0 NM_001099049.1 GLRA4 Bos taurus glycine receptor, alpha 4 (GLRA4), mRNA. 9e-08 60.8 86.27 0.172413793103448 NM_014601.3 EHD2 Homo sapiens EH-domain containing 2 (EHD2), mRNA. 1e-06 57.2 85.71 0.16551724137931 0 noncoding AGCGACTGAGCACGCACCCATACCTGGAAACTCAGTGAAGGGGGAATTTCTTTCCACGTGTGCCTTTCACTGGAGTGTGGGTGCCTCAAGAGTAGCCACTGTGGGGACAGATCACTTTTATCCATTTGGTTGTTCAGCAGATATTTATTGAGCACCTGCTGTGTACCTAGCACTGTTCTATGCACTAGCTGTTTAAATGTTCTTTTAGATCTGAATAGTTCTTTCAGGACCATAGTGATTACTTGTAAATGGTCACTTTTGCTTTAGAAAGAACCAAGCCCATTACCCTC TCONS_00213654 TCONS_00213655 TCONS_00213656 TCONS_00213657 TCONS_00213658 TCONS_00213659 TCONS_00213660 TCONS_00213663 . 3' 18189 TCONS_00213654 TCONS_00213655 TCONS_00213656 TCONS_00213657 TCONS_00213658 TCONS_00213659 TCONS_00213660 TCONS_00213663 . 3' 18478 EMBV3_24370 TCTCACACGCATCTACCTGTTTATTGCCCCCCAGGAATGGTTTTGAGGACAGGTGGTTAC Gene BVT0101_074490 + 0 NULL GK000006.2:15440841-16000761 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27979 GGGGGCGGGGCTCATTAAAGTGCCGTCACACACAGGCCTGGCTGGGCACCACCGTCTCGC Variant GeneID:618423|GFER:XM_002697921:562_cdna 689^928 1 EMBV3_26816 GeneID:618423 25 GENE GFER NULL growth factor, augmenter of liver regeneration EMBV3_28214 CCCGAATGCTTTAGTGGAATGAAGCTTGTGAAAAATAACAAAGAGCCAAAGTGGAAACTG Gene GeneID:100298356|LOC100298356:XM_002688576:275_cdna Constitutive 3 NULL GeneID:100298356 7 GENE LOC100298356 NULL similar to bone marrow stromal cell antigen 2 EMBV3_43593 GGATCCCTTCTTGGGAAGGCACCTCCAAAAGTGCTATTCCTCATGTTTCTTGAACAGGGC Gene BVV0102_245086 - 1 EMBV3_09670 GK000016.2:53168211-53199418 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38303 GAGCTGGGCTGTAGTTATCCCAAACGTGCATTTCTTCAAAGTCCAGTCATCCTCTGGCCT Gene BVT0102_064808 - 0 NULL GK000007.2:60579590-60588656 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217306 TCONS_00217307 1 XLOC_131480 Coding TCONS_00217306 XLOC_131480 Coding Coding DPYSL3 7:60586186-60603162 j TSS161863 4181 1 TCONS_00217306_2 315 8 0.754167893961708 0.000551927500273048 0.000329088959266502 0.000580024338583348 0.000207757301571451 0.0001910691138837 9.36395730727304e-05 9.43733230537647e-05 0.000559267359045276 0.000181959275344214 2.52769538158965e-20 1.61251891581802e-15 4.95090637092846e-21 2.62823125575375e-06 1.72712317967088e-05 9.01574181600593e-05 0.00571149046815479 0.00073588746882902 0.00156333940138353 0.000746896230268359 0.00052514799802946 0.000119670120010416 0.000813852708788053 0.0016004995824364 0.000981976486703135 0.000464920409718516 0.000150858425202275 0.000670548559966227 0.000195665771331613 3.57635569927393e-05 0.000700396041679303 XM_005209570.1 DPYSL3 PREDICTED: Bos taurus dihydropyrimidinase-like 3 (DPYSL3), 0.0 7485 100.00 0.992346328629514 NM_001387.2 DPYSL3 Homo sapiens dihydropyrimidinase-like 3 (DPYSL3), transcript 0.0 3160 76.55 0.991150442477876 TCONS_00217306_2 sp|Q14195|DPYL3_HUMAN DPYL3_HUMAN Dihydropyrimidinase-related protein 3; 0.0 641 98.10 0.996825396825397 1 coding 0 0 0 0 -0.183797633481645 0.318787769450006 0.0116400656041877 0.810065159084069 GGTGAAGGGAGAGTTGGAAGCCACAGATCTGAGCTGGAAGCTGAGGCTGTGTTCCGCGCCATCACCATTGCTAGCCAAACCAACTGTCCTCTCTACATCACGAAGGTCATGAGCAAGAGTGCAGCCGACCTCATCTCGCAAGCCAGGAAAAAAGGAAACGTGGTCTTTGGTGAGCCCATCACTGCCAGCCTGGGCACGGATGGGACCCATTACTGGAGCAAGAACTGGGCCAAGGCGGCTGCGTTTGTGACATCCCCACCTCTGAGTCCTGACCCAACCACTCCAGACTACATCAACTCCTTGCTGGCCAGTGGAGACCTGCAGCTCTCCGGGAGTGCCCACTGCACCTTCAGCACTGCCCAGAAAGCCATCGGGAAGGACAACTTCACCGCCATTCCCGAGGGCACCAACGGTGTGGAGGAGCGCATGTCTGTCATCTGGGACAAGGCTGTGGCCATGGGGAAAATGGATGAAAACCAGTTTGTGGCCGTGACAAGCACAAATGCTGCCAAGATTTTCAATCTGTATCCTCGCAAGGGAAGAATATCCGTGGGCTCTGACAGTGACCTGGTGATCTGGGATCCAGATGCTGTCAAGATCGTCTCTGCCAAGAACCACCAGTCGGCTGCAGAGTACAACATCTTTGAAGGCATGGAGCTGCGCGGGGCTCCTCTGGTGGTCATCTGCCAGGGCAAGATCATGCTGGAAGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATCCCCTGCAGCCCCTTCTCGGACTACGTCTACAAGCGCATTAAAGCCCGGAGGAAGATGGCGGACCTGCACGCTGTGCCAAGGGGCATGTACGATGGGCCGGTGTTCGACCTGACCTCTACGCCCAAGGCGAGCACCCCCGCCGGCTCCACCCGGGGCTCTCCCACGCGGCCCAACCCGCCGGTGAGGAACCTGCATCAGTCTGGATTTAGCCTGTCAGGCACCCAAGTGGATGAGGGGGTCCGCTCGGCCAGCAAGCGCATCGTAGCGCCCCCTGGAGGGCGTTCTAACATCACATCCCTGAGTTAAGCGACCCCTCCCCCAAAGAGAGGGGCAGAAGCAAGAAGAGATTCTTTTGAAGCCAAAATGGTACACCAATATTTAAGAAGGAAAGCGAATCCAAACAGTTTCGATCTAAAGAATCAATAAGCCTCAAGCCTTATGTTTCTCCAATGTTAACGCTCGCTTGCCTAGCTTTACGAATATTGCTTTGATTTCTGTTGATGCATAGCCTGGATTTGTTTGACGCCCCTCCCCCCATTTACATGCATGCAATTGGGCCGCTAAGGCAAAGCGTCTGCTATATAGTGTTGAGAGCGTGTGTAGTGCTGCATCTTACGACAAGGGGACAGACAAGTGGGGACGGCAGGAAAATGAACAAAAGGGACGCCGGTTATTTGGGGTGAGTGGGTGGTGGGAACCCAGAGCAAGGCGGAGGGCTCAGAGGGGCTGGGGTAGGGTGTGGACGGGGGAGGCGGGTGGGTGAGCATAGGGGGTCTTGTGTATTGTGTTGATGAAGTATGTTAATTTCCACGAAAGATGGCCGCTCGGGGCAGCTGGTACTCCACCACGGGCCCCTGGGGTCCACAGACCAGGAAGGCGATCTTCGGGTTCGGGACTCTGTCATGTCCTCTCCTAGTAGATTTTAGCCCTCGGAACATTTTATTAAAACACCAAAACCCAACCATTGCTTCCACCTTTTTGGTCGTGCCAGTGTTTGGTCGGGCCTCTTTCTCAGTGTTGCTTTCAAATTCTTCTCTTTCCTGGGTTGGGAACTAGGAGGAGAGAGAAGCAATGACCTTTCTCTTCCTCTTGCCCTCCCTGCCTCTTTGGTGCTCTTAAAAGGCAGCAGCTGGGAGGACAGAGCCGGCCGGGGCGGGGAGGGCTGCCGCACTTAAGTAACACCTCCCTCTAAACACCTGGCGATCACCTCTCAAGCTCATTAAATGGAGACAAGCAAGAGGCTTCTCAAGTTAGGCCTGGAGCTGAGGAGGACTTCTCTTGCCAGGGGTGAGTGATTCTCTTGCTCTCCTAAGATCCAGGCACATCTTTTATTGAATATGATTTTTTTTGGTTATTGTTGGAAGTTTGTTTTCTTAGGTGTTCCCTAGCTTTTATTACTAACAGAGAATCTCGGCTCATAAGGGAGGCAGCAGAGTTGTGAGAAAGGCAGTCTGAAGCAAAAGGATCACGTTCTGTTGCCGCGGTTGTTTGTCAATTCTGAACCATCTCTTGCCATTTCCCTTAGCATACCCTGTGGGGGAACTTTTTGTTTTAGTACCAGAGTCTCCCAGTGAGTTTCCACGTGACATGACACGTAAAAGAAATTAGCCTAGTGTTAGCATTTGCCTTGTCGGTCAGACCTGAATGTCCAATTCCCTATCGTTCCACTTATGAAAATTCAGTTTTGGAGCAAGTTCCGTGATCCCGCTGAGGTCCATATTGCAGGGAAAACATATTCAACCCGGTGTCAGACTTCGGTGCTTAGGGGCTCCAGCTGGTAGGTCCTGAAACCCTGTGAACTAAGTACTTTCAAGGAAAGAGCAAACACCTTTCAAGTGCTTAGGAGAAGCCATTATCTCTGCAGGTTTTAGTAAGTGTAAGACCAGAGAAGAGGGGGTACATGGCTAAAAAGGAGTTTGGAAATAGCCAAGGAAGAGGATTTCCCTAGCAATGTACCTTTCTGTTCTAATCATGGAAAAGATTATTTCCTTTCATAAAAGGAGTCTTGCTGTTTTTAAGGCTTTTTTCATGGTGCCTTTATCTTAAGAGAAATTTAAGCGAAGGGGAGGTTGCAGCTCTTGATTTATATACTCAGAGATTTGGGGGCCTTTGGTAGAACTCAGAATGACAGTTTTGCAGGCAGAGGGAGCTAGTCAGATCAGAAGCTTTCATATATACCTCATTGGCTGGGCTGTGCTTTAAGGTACATTGCAGTACCAGCCACAACCACCAGATGGAGGAAAAGACACATAAATGACTAGTCCAGGCATCCTCTTGTGTGCAGTCTGCTGCTCCTATCTAATCCCTGAGTCCTGCTCAGCCTCCCCACGACCTCTATGTGCTTTGAAAAATAAATCTTTCATGGCCAAATTGGCTGCGTTTAGCACTTCTGAATGAAACACTGAGCCAGAACTTTATATTCTGCACAATTTTTTTTTTTTTTTTTGCTGAAGGAACAACCCCTATATGCATTCATGATGGGCAACTTAACTGAGGAAGTCTCCCTGTCTTCACTTACTATTAGTAACTTTCCAAGCACAGAAATTTCTGAGAATTCCAAGAAAACTCCCAGTATATTGTTGACATTGAGTTCTGGTTCTTTGTTACTTAAGGTAAAATTTGTATTCGAATGTGCCCTGATCCATGAGACCCATCAAAGAGCTCTGTCCAAAGGGTTTAGGAAGAGAACATGATGGTGAGCCACAGCCCTCTCAGGATTCGCTGGCATCTCATCTGAGGGTGGGAGGGCATACTGGGTCTTCCGTCTCCTCCAAGCTTTCTTTGTCTGTCTCAATCTCTTGGCCTGGCCCCTCTCTAAGAGGGGATGGCAGTTATCTGGGCTTCTCTCTGGGATGGCCGCCATCTTTAGTAATTGAGAAGGTATTAGATAAATCAGCTACCCCCCCTAGAGATATTTCCTCTAAGTTTTCTAAAGAGAGCTGGGCTGTAGTTATCCCAAACGTGCATTTCTTCAAAGTCCAGTCATCCTCTGGCCTTTTCCTTTGTGACTCCATACAAAGAGTCATGTTCTGCCCCAAAGGCGTCCATTCCAAGCCTGGACTTGGGCTCCCCCGTGAGAAATCTTCCCAACAGCTTCTTGGCCCAAGCTTCCCAGACCTCCCCCCCTGGAACCTCCAGCTCGAGTCCCCGTGTACACGTGGGCTGTCCCAGGCAGCCAGCATCCCTTGTGAGTTCCCTCTTTGGAAATGGTGTGTGGGTGTTCAGTTCTGTGTCTGGTGACTATGAACAGACAGTGACTCTCCCTGTGACCTGTGGTAGCTGTGAAGCAGCTCTGGAACGCCGAGAGCTGTTTGCTTTGAACCGTGAAGAAAACTGTGTTTTGAGTTTAGCTGAGATTAAGGGGAAAAAAAAAAGTTCATCAAGTGACTGTTAATGTAAACCTGGTTATTAAAATAACTCTGAAACCACAG EMBV3_10244 ATGACTGTTGCCCCACCTTCAGCTGCGAGCCTCTGCTGTGCACCTTCAATGGCACGTTCT Gene GeneID:789503|LOC789503:XR_084112:76_cdna Constitutive 0 NULL GeneID:789503 29 PSEUDO LOC789503 NULL similar to Mucin-5B precursor (Mucin-5 subtype B, tracheobronchial) (High molecular weight salivary mucin MG1) (Sublingual gland mucin) (Cervical mucin) EMBV3_06743 AGGATTCCCTTGCTGAACGCCACATCAAAGGTAAATGTATTTGTGATGGGGATGACCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13471 AAACTGTTCCCAGGTGTACCCTTCAAAGGATGTTGGTACGCAGTCCATGAGGGAGGGCAG Gene GeneID:513096|C9H6ORF165:NM_001046137:17_cdna Constitutive 0 NULL GeneID:513096 9 GENE C9H6ORF165 MGC137317 chromosome 6 open reading frame 165 ortholog EMBV3_32831 TAAAAATCACTATTTTGTGTGCTCCGCGTGCTACAGCTTTTGGGAGTGGTTTGCCCACTC Gene GeneID:789747|LOC789747:XM_002688751:105_cdna UTR3_Alt 3 NULL GeneID:789747 7 GENE LOC789747 NULL similar to MHC class II regulatory factor RFX1 (Transcription factor RFX1) (Regulatory factor X 1) (RFX) (Enhancer factor C) (EF-C) EMBV3_02755 AAAGCCTGTGTGTGCACGAGAAGGATGTCTTGGTTATATGTAGAGTCATCTCACAGCACC Gene BVV0102_128585 + 0 NULL GK000010.2:93817392-93902437 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018492 TCONS_00018493 TCONS_00018491 1 XLOC_009266 Coding TCONS_00018493 XLOC_009266 Coding Coding SEL1L 10:93900620-93965136 = TSS12434 6583 1 TCONS_00018493_3 794 21 0.89828722002635 0.00366565639500938 0.00229504715280363 0.00238890481986923 0.00309495380874656 0.00162033758607332 0.00171132058321136 0.00143336438796628 0.00403995520629451 0.00417444859386613 0.000748382643384823 0.000788334183365566 2.08480560154246e-05 0.000972734504002434 0.000633199176875683 0.000169844385375733 0.0123183720011655 0.00482466877016513 0.00617691190412866 0.00218425627203817 0.00130566330079315 0.00121593784858704 0.00142992303147285 0.00603705163244959 0.00651468821403445 0.00327962343748529 0.00336864073318918 0.00202496194339779 0.000168832622944843 0.000531923357586202 0.000459868408377036 NM_001206908.1 SEL1L Bos taurus sel-1 suppressor of lin-12-like (C. elegans) (SEL1L), 0.0 1.187e+04 100.00 0.999848093574358 NM_005065.5 SEL1L Homo sapiens sel-1 suppressor of lin-12-like (C. elegans) (SEL1L), 0.0 4662 80.51 0.769861765152666 TCONS_00018493_3 sp|Q9UBV2|SE1L1_HUMAN SE1L1_HUMAN Protein sel-1 homolog 1; 0.0 1502 95.47 0.998740554156171 2 coding 0 0 1 0 -0.100924928158491 0.459739767483826 0.00210544074050342 0.963622225531543 GGAAGCCCAGCGGCCAGGCGGCGGCGGCGGCGGAGGAGGAGGCTGAGCTGGTGGTGGCCGAGGCGGAAGAGACAGCACCAGGGGGTGGCAGCGGCCCTTGGGAGCAGGATGCGGGTCTGGGTCGGGCTGACGCTGCTGCTCTGGGCAGTGCTGCTGGGCTCGGCCTTGGCGTCCTCGGATGAAGAGGGCAACCAGGATGAATCCGTAGATTCCAAGACTTCTGTGCCGTCAGATGAGTCGGTAGAGAACCATAGCCCAGCAAGCAGAGTAATCGCTGGTCAGATATTCCTTGATTCAGAAGAGTCCGAATTGGAATCACCTCCTCAAGAAGAGGAAGGCAACCTCAGAAGCCAAGAAGGGGAAAGCATTGCAGAAGAAATCAGCTTTCTAGAATCTCCAAATCCAGAAAACAAGGACTATGAAGAGCTGACGAAAGTACGGAAACCAGCCCTGACCGCCATTGAAGGCACAGCGCACGGGGAGCCCTGCCACTTCCCTTTCCTGTTCCTGGATAAGGAATACGACGAGTGCACCTCGGACGGGAGGGAAGACGGCAGACTGTGGTGTGCCACCACCTACGACTACAAGGCGGACGAGAAGTGGGGCTTCTGCGAGACTGAAGAAGAGGCTGCAAGAAGACGGCAAATGCAGGAAGCGGAAATGATGTACCAGACCGGGATGAAAATCCTCAACGGAAGCAACAAGAAAAGCCAAAAAAGAGAAGCTTATCGGTATCTTCAGAAGGCAGCAAGCATGAACCACACCAAGGCCCTGGAGAGAGTGTCCTACGCTCTCTTGTTCGGTGATTACCTGACACAGAATATCCAGGCAGCAAAAGAGATGTTTGAGAAGCTGACCGAGGAAGGCTCTCCCAAGGGACAAACTGCTCTTGGCTTTCTCTATGCTTCTGGACTTGGTGTTAATTCAAGTCAGGCAAAGGCCCTTGTTTATTACACATTCGGAGCTCTTGGGGGCAACCTAATAGCCCACATGGTTTTGGGTTACCGATACTGGGCTGGCATCGGGGTCCTCCAGAGCTGTGAATCCGCACTGACTCATTATCGTCTTGTGGCCAATCATGTTGCTAGTGATATCTCGCTGACGGGAGGCTCAGTGGTGCAGAGAATACGGCTGCCTGATGAGGTCGAAAACCCAGGAATGAACAGCGGAATGCTCGAGGAAGACTTGATTCAGTATTACCAGTTCTTAGCTGAAAAGGGGGATGTGCAAGCCCAGGTTGGTCTGGGACAGCTGCACCTGCACGGCGGCCGTGGAGTGGAACAAAACCATCAGAGAGCATTTGACTACTTCAACTTAGCAGCGAATGCTGGCAATTCCCACGCCATGGCCTTCTTGGGAAAGATGTACTCAGAAGGAAGTGATATTGTACCTCAGAGTAACGAGACGGCTCTTCACTACTTTAAAAAGGCTGCTGACATGGGCAACCCAGTTGGACAGAGTGGGCTTGGAATGGCTTACCTCTACGGGAGAGGAGTTCAAGTTAATTATGATTTGGCACTGAAGTATTTCCAGAAAGCTGCTGAACAAGGCTGGGTGGACGGGCAGCTGCAGCTTGGCTCCATGTACTATAACGGCATTGGAGTCAAGAGGGATTACAAACAAGCCTTGAAGTATTTTAACCTAGCTTCACAGGGAGGCCATATCTTGGCTTTCTACAACCTGGCTCAGATGCATGCCAGTGGCACTGGAGTCATGCGATCGTGTCACACTGCGGTGGAGTTGTTTAAGAATGTATGTGAGCGGGGCCGGTGGTCCGAGCGGCTCATGACTGCTTACAGCAGCTACAAGGACGGGGACTCCAACGCCGCCGTGATCCAGTACCTCCTGCTGGCCGAGCAGGGCTACGAGGTGGCACAGAGCAACGCAGCCTTCATCCTCGACCAGAGAGAAGCGACCATTGTAGGTGAGAATGAAACTTATCCCAGAGCTTTGCTTCACTGGAACCGGGCCGCCTCACAAGGCTATACTGTGGCTAGAATCAAGCTTGGAGACTACCACTTCTATGGCTTCGGCACGGATGTGGATTACGAGACTGCGTTTATCCACTATCGTCTCGCGTCTGAGCAGCAGCACAGCGCACAGGCCATGTTTAACCTGGGCTACATGCATGAGAAAGGACTGGGCATTAAACAGGATATTCATCTTGCAAAGCGTTTTTATGACATGGCAGCCGAAGCCAGCCCAGATGCTCAAGTACCAGTCTTCCTGGCACTCTGCAAGTTGGGCGTTGTCTATTTCTTGCAGTACATACGGGAAACAAATATTCGAGACATATTCACCCAACTTGATATGGACCAGCTCTTGGGACCCGAGTGGGACCTTTACCTCATGACCATCATCGCGTTGCTGTTGGGAACAGTGATCGCCTACAGGCAGCGGCAGCACCAGGACATGCCTGTCCCCAGGCCCCCGGGGCCACGGCCGGCCCCACCGCAGCAGGAGGGGCCCCCAGAGCAGCCGCCGCCGCAGTAACCCGCCGCGTCCCCCCGACGGTGACAGACAAGGAAAGGGTTTGCTGAGAACGCTTGCATTCGGTGTAGGACTTTGGATCAGTGATTGCCACCTCCTGGAAGAGGCACAAGGAAGCGTTAAATTCCTAAAGCTGCTTGGAATCTGATGCCTTTATTTTCAGGGATAAGTAACTCTTACCTAAACTAAGTTGAATGTCCATTTCAGTGCCGTACGGAATAACAGCTCTCAGTGGCTTCCCCCGCCCCCCTTTTTTCACCCCGGAAACATTTGCAAGGCACTCGCAGTGGTCATGTCCGCTGTGTCCAGCTGTCTTTCTTGGGTCCCTTCAGTCACTCTTTCCCGTTCTGTCAGCCGTCTTGAAGGTCTTATGCATTGACACTAGAACTGATCAATGAAAAAAGGAAAACCCAGTTAGTTGCAAATTTAACCTTAACATGTTTGAAAGTCTGAAAATAGAACTTGCCTTTTAAGTTAAGAAAAAAAAAAAGTCCTCAAAGTGTTCCAGAACTGTGATAACCAAGGACCTTTGATCAGTCCATGTGCAAGTATACATATGCAGCGTATTTGTTCCTTTAAAAGGGAAGGTTGGGCGGTTTCTTATTATTGGTGATTGATTGTCATACTTTATACCATACTTCTCTCCTTCAAAGACTGAAAGGCCTTGTTAAAGAGTTTTATGTGAACTTCATTTCCTTGGAGTGGAGTATATAGAAAACTTTGTGAACTGACTCCTTGAGCTAACACATGAACTTGCCCCACCTACTCACTGTAATTTGCTTGTTTGTTACAAGTATGCAGAGCCTTCATCTGGAGCCAGAGGCTGGACTGAACGGGAGAATTAGAAAGCAATATTGAAGGACTCTGGGTGGGGTACCAGGATCACAGACACACTTTCCCAAAAGTTAACGCTTCTGTTCCCAGGATTCATTTTATTAATACTTTGCATTTCTTACTGCAAAAGAACAGACCACCCTCCTGAATTCTTTAAATGTGAAATATCCTTGCCAGGCTATGGCAGACAGAAACTACCATTACAATACTAAAACTCTAGCGAGTCAGAGATGCATTAAAATCAGTGGTTGAAGAAAGCTACTAAAGTCTCCTTGTTCAGATAGATTTTTATTTCTGCAGCTTGATGTAATGGGAGAAAATCAACCACCTGCGTAGCTACCATGTTTCATCACCATCCCACTGTTAACAGGAGGAAAAGCGAGGCTGTTACACTTCAGAACTGTCTGCTTAAGGAGTACGGAGAAAAGCCACCACGGCACCAACAAAGACCACTGAGAACATCACATACACAAATGAAGCACGTCAGCCAAACCCATACTCCGTTTTACAGTTGGGTGGCAGCGTTCGCCAGCCTGTATCCAATCTGAGGCCCGTTGAGCGTCTGAGCAGGCTTTCTGCGCTTGCTGACCTCCGTCTGTTTCTATTAATCTTTATACTCTTTTCATAACCCCTCATGTGCCAGAAAACTGGAAGAGTTCCTTACCTGTAGACTTATAAAACTTTGGTTTTTGAAGTGGGGATTGTATTTAGAACTAGGTCTAATCAGTCCGTAAGGAAGCTGAGGGCTCTAAATGTGAAGTTGTGTGCTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGTATTATGAGAAACCTGGTGAGCAAACTTTCCTCCTGGATAGTTGCTTCTAAACCTGAAGAGGTGGTCACAGCGAGAACCATGTGTAAATGCACATCTGAAAGGTAGGCCATTTTACCCTCAGAAATGTAATGTTGCTTTGGGCAGCTCATGTAAATACTGAGACTTCTGTTCGCTCTCTTATGTGAGAGATTCGCTTGCATTTGGTACAGGATGTTCATGTCTTCACCCCTGCCTCTTCTCCCCACCCTTCAAAATAAGTATGATCCACGGTCAGAGCCACTCTCCGTTTCAAAGAAACTGTTTCATTTTATTTAAATGTTTAACAAATAACTTCTATGTTTTTCTGTCATCCACCTAATTTCTCCTTTAGCAGTATTCTTATCTCTTTATCTTTCCTTCCCTCTTAGTACTTGGAAAAAGACAATTCTTCAACAGTGGCCTCTACCCCGAGGCAGACGGGAAAGGCCGGTCTTGTTCTCCAGGTGATGACAGACTTCCTGTTGGCGTACCTCTTGCCCATGTCCTTTTCATTCATCTTCCAAATCGATCTTTTTTCTGTTGGCCTTTGTCCACCTCCTGTTTCACACAGGCTCATTTGCTACTGGCAGTTTGAATGGTAAACCTAAAATAGTTTAGTTCCTGTGACTTCATTCAAAGACTTGTCTTGAAATCCTTGGCTCCCTTCCTCGGCCTGTACAAGGGACCTGATACCTAAACAAATAGGAACGGGGTTTCTCCTAAAATAACGCTCAATACTTAACCTAATCAAATGGCATCCATTTGAATACAATGACAGTAACTCAAGCTAGTTAATGTCAGTGACATTAAACCAACTCCAGGATTCAGGAGTTTTACTGTTAGGATTTAGAGTTAGCAGGTAGAGTGTGGCTTCACCTCTCCGCGGTAGCCCAGCTCTCCCCGTCCCTGTGAGAGGCTGTCTTCCTGCCTTCGGGGCAGCGGCAGCAGGGCCTTTGCTCAGGCTTCACCTCTCCGCGGTAGCCCCGCTCCCCGTCCCTGTGAGAGGCTGTCTTCCTGCCTCTGGGGCAGCGGCAGCAGGGCCTTTGCTCAGCTTCCGTTCTCTTGTGCGTTTGGTCTGTTGCTTATCCAACCGTTCCAGAGTCTGGAGACTCTTTAGCTTTTTATTTTCTGCTAAGAAGGTGGCACTGGTGTTTGGGGTTTGCTATTGGTTTTCTGTTTTGTTTTGTTTGTTTTTTCCTTTTTGTTCTTGGAGCTTTTGTTTCTGTTTTCTGGGTAAGGCTTACCTTGTTCTTAGTTTCTATTCAATGGCACAGAAAAATCAGGTTTCTTTTCTTCCAAAATGATTTAGCACTTAAAGGAGATTAACTTGCGGATCATTAATCCTAATACTCTTGAGGATGTGTTCCCCTTCTGCATATGCGGTTAATTTGTGAGTTTTACTGCTAAGCCATTGTATCTCTCTATCACTGGGAAGTTGTAGAAACTTCTGCCCATGATCTGTTGCTTTATTTAAGGAGCTGCTGTTGCCTCCAGGAAACTCAAGAATTTTGTATGAGCTTTTTTTTTTCTTTCACCTCCTTTCTTTGCTCCTCATGTTCTTCAAACCAGTGTTTTGGAAGTATGCATGCAAGCCTATAAATGGAGACCACAGGTCTTCATGTATGTGGCATGTGTATTATAGTGTCTAGCTACATCTGCAAACACCTTATTCAGAGGTTTGGATTAACTTTTCACATGCACATTTCAAAACAAAAGTTTTTCAGCCGTTAAACACCCCCCTTACCAAGAAGAGCAGCATGGGCTACATTTACCCCAATAACAGCTACTGTTTGTTTTAAAAGTGAATTTAATTATATGTTATACAATATTATGACTACCACTGTGCAAGAAATAAAGCAAAAGAACTTCTATTTTCATGAAAGTATTTTTCATCAGTCATTGGTCTCAGATATAAGTGAAAATACAAACTTTCTGAATACTGTACTGTCTGAGGCACTACCTGACTTTTAAATGTGTAGTAAAAAGAAGCTAAATTTCTCCTTCCACTTGGTATTTCAAGAAGATTGAAAATATTCCACGTAAAAATGATTTGCACAAGTGAAAAGCCTGTGTGTGCACGAGAAGGATGTCTTGGTTATATGTAGAGTCATCTCACAGCACCAGTTTTCCTGTTTGGAATTATAAGATGACACTGTTCTCTTTGATTTAAAAAAAAATCATAACATTTGATACGATCAAGGTGTAACCACTATTGATACTTAGGAGACATTTTAAAAGACCATAAACTGACATTGGAAAGAACACCATGGTAGACTTTTTGTAAATTTATTTTGTATTTAATTAAATTCAGTATAAAGGCTGGTGAAGTGTAATATAATTGTGTAAACAAATCCTGTTAATAGAGAGATGTACAGATTCGTTTTGTACTGTATCTTGAAACTTGTGAAATAAAGATTCCACCTCTGGTTA EMBV3_13376 TGGTTGTACAGCTAAAGAAACAGAGGCTCACTTCCCACTGGTGACAAAGCATGACAATTC Gene BVT0102_060028 + 1 EMBV3_38791 GK000009.2:53813750-53977190 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19489 AACCATGAGGCCCCTACACGTCCGCACCACCTCGGATGGAGGTTACTCTTTTAAGTATGA Gene GeneID:281254|INHA:NM_174094:14_cdna Constitutive 0 NULL GeneID:281254 2 GENE INHA MGC133965 inhibin, alpha EMBV3_41542 GACTTTGATGGGGTTGCTGGTGCTTTGTCAAGTGGATGTCAGAGTTTATTACTAGTAAAG Gene BVV0102_283348 + 0 NULL GK000005.2:82260791-82452345 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14999 TGCTGTGAATTAACTAAGCATGTGGGCCAGAATTACTGAGCCTGTGCTCTAGAGGCCCAC Gene BVV0102_255555 + 0 NULL GK000012.2:18349306-18525479 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00048 CATGAAAGCAAAGTGTGAGATTTTGGTTTGTGTTTTTTCTGTATCCCATATACTGCCTCT Gene GeneID:615773|FAM119A:NM_001083518:47_cdna Constitutive 2 NULL GeneID:615773 2 GENE FAM119A MGC142783 family with sequence similarity 119, member A EMBV3_09439 GCAGCTCAGACCAAGCGAGACGTGGTCCATAAACGCTATTTACTATATTTTTTGTTGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30751 AGTAGTCGATATCCTTTTGACTCTCCTCAGAGACGACCACCAGATAATTCTTTTTATGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27945 GAAGAACTTTCTGCCCGTGCTAATGGAGCAGCAGGAGGTGGGCTGGTATTAGAAGTTACA Gene BVT0102_216462 + 0 NULL GK000020.2:8430126-8522181 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114379 TCONS_00114378 TCONS_00114380 1 XLOC_069280 Coding TCONS_00114378 XLOC_069280 Coding Coding - 20:8468678-8507300 - TSS85338 4595 1 TCONS_00114378_2 215 0.073993471164309 12 0.881333989280443 0.00116769615850362 0.000974285522384722 0.00107974330617224 0.000338029643195574 0.000169912785154223 0.000360682856213933 0.000412805545122817 0.000371980230285814 0.000468780935210898 0.000203885217604212 0.000167521157107814 1.11658644260602e-05 0.000142400095867839 0.000113052201226078 1.03666224684288e-07 0.00155857073784656 0.00144949434161076 0.00131140348990563 0.000797760235748987 0.000457481355596925 1.11852252536753e-06 0.000964264082765329 0.000570895312191923 0.00162292460395648 0.000812492279094902 0.00107160101127623 0.000710604382091188 0.000228251136346374 0.000185961947975622 0.000181860124570626 XM_005197867.1 SGIP1 PREDICTED: Bos taurus SH3-domain GRB2-like (endophilin) interacting protein 1 (SGIP1), transcript variant X2, mRNA. 1e-51 210 66.46 0.175843307943417 NM_138782.2 FCHO2 Homo sapiens FCH domain only 2 (FCHO2), transcript variant 1, mRNA. 0.0 4089 84.81 0.77867247007617 TCONS_00114378_2 sp|Q0JRZ9|FCHO2_HUMAN FCHO2_HUMAN FCH domain only protein 2; 2e-146 432 95.81 0.995348837209302 1 coding 0 0 0 0 0.0303982547229179 0.814872818225921 0.0133577558613345 0.809865244410557 TAAGGTGAAGAGTTAACAAAATCAAAGCCGTCTGCTGCATCCAATGAGAAAGGGACCAGTGATTTACTTGCTTGGGACCCCCTGTTTGGACCATCTCTTGATTCATCGTCTTCAGCTTCATTAACTTCATCATCGTCATCAGCCAGGCCCACAACTCCTCTTTCTGTAGGCACCATTGTCCCACCTCCAAGGCCTGCTTCCAGACCAAAGCTTACTTCAGGCAAACTCTGTGGGATTAATGAAATACCCAGGCCATTCAGCCCACCTGTAACTTCTAATACCAGCCCACCTCCTGCTGCTCCATTAGCACGGGCAGAAAGTTCTTCCTCTATCTCATCTTCTGCTTCACTAAGTGCTGCCAATACTCCAACTGTAGGTGTGTCACGAGGTCCCAGTCCTGTCAGCCTTGGAAATCAAGACACCCTGCCTGTGGCAATTGCCCTCACAGAATCTGTTAATGCCTACTTTAAAGGGGCAGATCCCACCAAGTGTATTGTGAAGATCACTGGTGACATGACAATATCATTTCCAAGTGGAGTTATTAAAGTCTTCACCAGTAATCCATCTCCAGCTGTGCTCTGCTTCAGGGTGAAAAATATCAGCAGACTAGAACAAATTCTTCCAAATGCACAACTTGTGTTCAGTGATCCATCACAGTGTGATTCTAACACAAAAGATTTCTGGATGAACATGCAAGCTGTTACTGTCTACCTCAAGAAGCTATCAGAGCAAAATCCAGCTGCTTCTTACTATAATGTAGATGTATTAAAGTATCAGGTGTCATCAAATGGTATTCAGTCCACTCCTCTAAATCTTGCCACATATTGGAAATGTAGTGCTGGCACCACAGATCTTAGGGTGGATTATAAGTACAACCCGGAAGCTATGGTGGCGCCAAGCGTGCTCTCCAACATACAGGTGGTGGTACCAGTGGACGGCGGAGTCACACACATGCAGGCCCTTCCCCCTGCAATATGGAATGCAGAACAGATGAAAGCCTTTTGGAAACTGTCTGGTATTTCGGAAAAATCAGAAAATGGAGGTTCTGGGTCCCTCAGAGCAAAATTTGATCTTTCAGAAGGACCCAGTAAACCCACAACACTTGCAGTGCAATTCCTCAGCGAGGGAAGTACCCTCTCAGGAGTAGATACTGACTTGTAGGCACTGGCTACAGGCTTTCCTTAGTAAAGAAGCGGTTTGCCACTGGACGATACCTGGCGGATTGTTGATGGACCTGGGAAAGTGGTTGGCTCAAGGGAGTAGTACAAACCTGCCGTTCTGCATTATTTTTCTTTCCAAACACTATTCTGACTTGTATTATATCTTTAAGAGCTAACTACAAACATTAAATTGCACTTTTGAAGTGAGTCACCGAAGAAAATAGCACTGAAATGATTTTCAACGCTGTAAATGATCAACTGCAATATTCAGGAAGCACATTTATTCAGATTCTCAGTAAAATGAAGTTTTTATAGGCTGGAAATTTTATCTTCAGTGTCTATGTTGAAAAAGGGGCTTTTAGTGTAATATGAGGCCTGAAATTTCAGGAGAGGAAGCACAAGATAATTTAGCTTTCTATAAGTTTTTAGAGTCAGAGGTAGCTTTTAAAAACGTTTAAGTTTGATATTAAATGGATACAAACAGAACGTGAATTCTAAGTTTGGGATAATGTTGATAACACTCAATCAAATTGAGTTATGTGCCATAAAGTAATCAGACCAGAGTCCAAGGTGTATGCAAAATTTATAATTTGATTCTCATATAAACATATTAATAAAGTGTAAATGGTGTTTTATATGATTTTTTTTAATCCTCAAGTGCAATGTGTTTTAAAATAAGCTTGCAAAAGACAGCAGAGAAATTTGCTTCTGCAGTTAACTTTATAGAAGTTGTGATTGTTTTGATGAATTAATGCTGTTAGATTTAATTTATTTTTATATGGATTGCATAACGTGTGCCTTTAAAACAATAACAAAACCCAGAAATGTGCCTATCCAGTTTGTGTTCATTAATGTGCCTCACTTTTTTCCTCACAGTCCAGATTTTGTATTCAGAATCTTAGTCAAGAATTTTTACAAGATAATTGCGATTTTTTATAAAAATCTTTGGTTGCAATTGCAGTGGGAATTCAGAATAACTAGAGGACAATTTATACTTAAGAACCCTGGCTCCCTTCTTTAGTGTTACACTGTAGCCACTAGAGAAATATAACTAACAGCCTATGTTTACAGGGGAAAAGATTACCTTCAGATGTTCCATCTTAACCTTATCAAAAAATTCTGCAACACCGTAATGGTAAATTGGTAACAGGCATTTTCACTCTCAACTTAACATTTCCCCTCACTCTTATTATTGGAAATTTATATATTTATTTACTGAATGTGATGTGAGCATGAGTTTGTAGTAGTTTGTGAGGAACACACTTTAGAAAAGATCAGTTTTGGCATTTTCAACACTTGGAAAAATTGGCAGTTTTTATGTTCTTTTTCTTATCACCACCTGCTAAAAATGAGGAAACTATTTGAAACGATGGATTGGGTTAAGCGTTTCTTAAAATAAACTACTAATATTAAATAGTAAAAAACCTAACATTATAACAAATCCTGATTAATTGAAGGAAGTAAATATTTTGGACACAGTTTCATAATTTACAAATGGGAATTTTATTTATAAGGATAAGTACCAGTGTCCTGCATTTTGCATAGAAGTAATAAATTGTGTTATATATAGTAAATTTATATAAAATCACTAATTGTTCTCTTAAGCTCTACAGAAAGTAAAATCCCTCCCTCTATACATTTATGTAACATCTTGCTATATTAAATACAGCAGAAAATCTACTCATTAGCAATATATATATATAACACAATATGTGCTTTTTAAATATATTCAGTGTTAGCCCCATTCTAAATTTAGATTTGACTAAAGCAATACATAAGATAATTTGCTAAAATTTTCATCTTGACTAGATAGTGGACAGAATTAGAATTTCTAACATATTGTACCCTTTTAAATGCCAATTACAGTCCCTTACTGGAATCTTAACTGTAATTGCTTTGCAAACTGCTTTTATTGGGAAGTTAATATTTTATTATTGGATAGACACCATTATACTCACCATGTTTGTTTTTAATCAAGTATTACCTTAAAATGTACAAACTAGTGAAATGGTTATACTTCTGCACTTTCTTAATTACCAGTCCTCATACCAAGTATTGGTACATAAATTTGTATCGGGTGCAGGTTACAATTTTGAAGCCATATGAGTTTATATTGATTTTTTCATTTAAAAATCCACTAATGGTGTAAAAAAAGACCAATAGATTTTCAATGGGAAATGTATTTTAGCAAGCTGGTTCTTGCTTATGTATAGTGATAAACTTTGTAGCTGCCTCTTTAACCAAGAATTTGTAAACACAGAACTCTTAACAAATGTGAGTTTTTAAGATTTGTTATTTACTACTTTGAGTTGTAATTAGAACAATGCAAATCTTACAATATTTTGTAAATATTTTTGATTTTTCATAAAAATGTAAATTTTACATAAAAGTTGTACCCTTAATAAACATGTAATATATAATTTATCAGTTGGTTTGTGTGTTGTACTTTTGTTGATGGTAATAATAGCTATGTCATAGACATTATGACAAGGCAGGCTTGGTAAGTAATGAATAATTGGTTTTGAACTTTGTATCACCATTTAGACAGCCATTTACTAAGTTTTAATTGGTTATATAGGAAAACTTCATTTAGCATATAACCCAAAAATGTAGAAATTGTTTAACAAGGGATTATTTTGGTTTCTAAATATACTTAACTTGATGTTAAGCTTTAGCAAATACTCTCCCCCTGACCAGTTTTTTAGGAACACAGTGTTGCCGTTTCAAAATTATACTCTTCCAAGGAACATCAAGGCTTTCAGAAACCAGTGGATTTAGAAAGGAGTTAAAAAAAAATTTGAAAAAGATTTCCTCATAAATATTAAAAATTTTGCTGACTCTATGTCATAAAAAGGACAGGTTGTGTTGGGTTGGGGACCCTGTGTAACGAACAGGTAGCACTCTTACATTCATGTCATACACTTCACTTACCTTATTTCTTCATTAGTCTCTTTTTTCCCCTTCCCCTGCTCCCACCTGTTATAGTGAATGATGCTAGCTGCTATAATAAGTAAGGTCTCGACCTTAAACACTGTAAAATAGTATTGCTCACATCACAGTTCTAAGGAGGTTGGAGGAAGAGCTCTGCTCCTCACAGTAATTCAGGGCAGGCTCCCTCTGTTTTTGTGACTCTGCTCAAAGTCTTCTCCATTTGGCCAGTGGATGGGGAAAGAGAGAAAATGGGTATTTATGGGCCAGGCCCAGAATTGGCATTATTTCTGTTCACATTCCTTTAGCAACAACTTGATCTGTGCTCCCAACTAACTACAAGGAAAGATGAGAAATATATAGTGTGGCTGTGTGCCTAGGAGGAAAAGAAAACATGTTTTGATAACCCAGTAATCCTCTGGCATGTATCCTAGCCTTTCTCTATTTGGTTAACTTACTTTATTCCTTTCTCCTAAATGTGTATTTAATGGTGTCTGTGGCTTTCAC TCONS_00114382 TCONS_00114383 TCONS_00114384 TCONS_00114385 TCONS_00114386 TCONS_00114387 s 3' 37722 TCONS_00114382 TCONS_00114383 TCONS_00114384 TCONS_00114385 TCONS_00114386 TCONS_00114387 s 3' 2489 EMBV3_24068 CTGCAGCTTTGGCTACTGGGTGCACAGTGGAAATTAACGGTGGAGCACATGATTATTACA Gene GeneID:521179|PM20D2:XM_002690194:41_cdna Constitutive 0 NULL GeneID:521179 9 GENE PM20D2 NULL peptidase M20 domain containing 2 EMBV3_25665 CGAGTGAACATCTGGTATGGACTCTTCGTCCTAATGTCAACAGTGGTTTTAGACGCCCTG Gene GeneID:504857|LOC504857:XM_002693418:111_cdna Constitutive 0 NULL GeneID:504857 15 GENE LOC504857 NULL similar to olfactory receptor MOR31-4 EMBV3_26459 CCTTTTTTTACTTTGATCCCTTTTCAAATTGGCATGTCTTTAAAGTATTTTTCTCCCTTG Gene GeneID:507365|NET1:NM_001034296:20_cdna Constitutive 2 NULL GeneID:507365 13 GENE NET1 MGC127767 neuroepithelial cell transforming gene 1 EMBV3_30060 AGCAGACTAATCACTGCTGGCTATGTCTCACCTTGGATTTTGGCTCATGGCAGACACTGC Gene GeneID:100295593|LOC100295593:XM_002684676:35_cdna Constitutive 0 NULL GeneID:100295593 1 GENE LOC100295593 NULL hypothetical protein LOC100295593 EMBV3_31434 ACTGGGCAGGATGTGGGTCTCTTGCCACCATCGTTTTATTGTTTCGAAGCTTGTCTGACG Gene BVV0102_327694 + 0 NULL GK000016.2:78555191-78622959 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02159 AATCTGAAACCTCCAGTTTGGGGTAGGGGGTTGGGGGATGACTCCTGCAAAAAGGGAAAG Gene GeneID:507697|RNF157:XM_002707767:133_cdna Constitutive 0 NULL GeneID:507697 19 GENE RNF157 NULL ring finger protein 157 EMBV3_29715 CTGAGCGGCGGACCGAAAATGTGGAGACCTGTCTCTGCGGGTCGGCCTGCAGATCTCACT Variant GeneID:522614|ADCK5:NM_001101110:104_cdna 69^322 1 EMBV3_37073 GeneID:522614 14 GENE ADCK5 NULL aarF domain containing kinase 5 EMBV3_04521 GGCAGGAAGATGGTGGCCGCAAAGAAGACGGAAATCTGAAATAGAGTATTACGCCATGTT Variant GeneID:513031|RPL30:NM_001034434:30_cdna 91^236 1 EMBV3_24901 GeneID:513031 14 GENE RPL30 MGC127434 ribosomal protein L30 EMBV3_04137 AAGTTATCTTTGTGCACCACCAGGGGTATATCTTGCATACGGGGTTAGCGTGTTCCGGCA Gene BVT0102_140367 + 0 NULL GK000017.2:58009038-58033198 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077587 TCONS_00077586 TCONS_00077589 TCONS_00077591 TCONS_00077588 TCONS_00077590 1 XLOC_047097 Coding TCONS_00077588 XLOC_047097 NonCoding Coding TMEM233 17:58031792-58109048 j TSS57941 2385 1 TCONS_00077588_5 123 0.292662473794549 4 0.969179988350269 0.00161984479173077 0.00148766938244818 0.00226208792175 0.00237709531203966 0.00171762467851165 0.00108381908897356 0.000649593603542229 0.000876756642724132 0.00140328029474171 0.00076012541109733 0.000948833335564922 3.25293144800988e-05 0.000158510770801694 0.00319790980011132 8.91413427001604e-12 4.66362793521671e-09 1.63851842343313e-10 1.37084164478649e-07 0.0015088223174103 0.00298406134863815 0.00049880566563072 5.58922559807471e-11 4.90794424504076e-08 8.84000737994604e-08 0.00401460345434381 0.00608052641754881 0.0014422404790096 3.25260020520214e-08 0.000102679938910784 2.94086171014717e-05 XM_002684418.3 TMEM233 PREDICTED: Bos taurus transmembrane protein 233 (TMEM233), mRNA. 0.0 3826 100.00 0.888888888888889 XM_005253881.1 TMEM233 PREDICTED: Homo sapiens transmembrane protein 233 (TMEM233), 3e-158 563 69.89 0.518658280922432 0 noncoding 0 0 1 1 -0.365771466047169 0.298954002682402 0.0417414159928634 0.455815875173583 GCAGTGCCTTGTGGGCAACATCTCTGCAAGTCGCCCCACCATTTTGCAGTAGGAGGTCTGGCCTGAAGTGCCTGGAGTAAGGCGTCTGTCAGGCGCCTGCAGCTCCCTCCGTGGAGGAAGTGAAACCAGACCAAATCCTAAGGAAAAAAGCTAACCATGGATCCATTCCTGGGATGACTCAACATCTCCTTTATGAGCTCCAGAGGGATGGTGAATTGCCAAGAAAAGGGTTACATACAAGATGCCAGACTGCTAACAGGCTCAGAACAGCTATGAGGATGGAGACATCGAAGGATCCAAGCGGCTTGGAAGGAATGCCAAGTGGGTGGCCGTCGCCTCCATCGTTATTGGCCTTCTCGTCATTGCTATTTCTTGTACAGTTCACTTCACTTGGAAATAGAGCCTGAACAGCCAGCAGTCAGCCACGAGCATGGAGGATGGACCTCATCCACACACACCCCAGAGGAGTTTTTGAGGAATGGATCCTTGACTTCAGACTGTGAGATCTTTTCCTCCAGGACTCTCCAGAGGCAGGTCCCTGGCAAATGAGCTAAAACCAGAAAGAACAGCAGGCAACAACAACAAAAAAGTCCAAAATTTAGGAAACCCAGGCAGCAAAGCCAGATCAGCTGAAGCCATTGATTTTTTTTTTTTTAAAGAAAATCAAGCCTCACTGTTTCAGTATATCAAAAGCCGTTGTGTCCATGTGTGCGTTCCTCTTCTCCAGAGATGAGCCTCAGAAAATCTCGTTGCTTTTAATGGGGGCAGTCCAGATCCAGGAGGAGAGGGACGTTTTGGGAAGAGTAAAGGATGCTGGTTTGCAGCATGGAGCACATTTGCAGCATGTTTAAAGCCATCGAATAGCGCCTTGTCTCCTTTCATTTTTACATGTTGTAGCTTCACTTTGGCCTTTAGCAGCTCCTCCTCCATCTGCTCCATTCCATCATCAAAGATGGGGATGAAGGAGCTTTCTGCTCTTTCGCCTTAGTCTCGCCTGACTCCCTCCCACCAGCCCCTTGCTTGCAGCCCCCATGGGTCAACTTGACCACAACCTCATTTGTCACCTCAGACAGACTCAGACTCTGAGAATGTACTTAGTGGCCATCATAGGTCCATGGGCATCCCTCCCATCCCAGTTTTGGGAATATACTGCCTGTGTTTAATGAACTTACTTCAATCTCTCTCTCTTGAGCAAGTCTCAGGCAAGATCTTTGATTTTCCTGGATGCCACCTGGAAATGCCACCCAATGTATTTATTTTTCTGTCAAATGTAAACCCTGTAGGTGTGACTACTGGTTTAACAATGCCACCATTTTCCTGCCTGCCGGAACACGCTAACCCCGTATGCAAGATATACCCCTGGTGGTGCACAAAGATAACTTTTAGGTCATATGCAGCCACAAGATTAAGTGTCACTAAATCACAAAGAACATTTGCATTTTTCTTTTTCAATCCTGATTACATTTCAGAAAATGTCTCTGTTTAGTGCTCATGGGTCCTCAACACCTTTCTGATTCTTTGGCTTGTTTCCCTTCTTAATAAAGAACAGACCTCAGGTTCAAAGTCTTCTGTTTAGACAAAATTTAGTAACTTAATGGGTTTTATTTTCAGTCTATGTATTTTATTGCTTTCCATTTACGAGTCTCCACTTAGGAGTATAATTTTCTTGTCAAATACATTTACTTACAAAAAGAAGTAGACTCAAAGAAAATATTAAGTGGTTAATACAAAAGGTGATAAGGGGGTATATGTTAAAAATAACTTGAAAAACTAGTACTAGAAATCATGAAAATAACCTTCCTAAGCAAAAGAAAAGGCAGCTTATTCTAAGTGAAAGAACAAGTGTCTAAATCAAAACACCTGAGTTTCAATACCTTCTTTGCCACTATCTATCTATTCAAGCAGGCTTTAGGCAAGTTTCTTAGCCTTCTGTGCCTCAGATTTCTTCATCTGGAAAATGGAGATAAGAACACCTGCCTACTTATCTTGGAGTGGTCAGTATGATAATTAATTACCATGATAGATACGATTGCCCCAGAGGGAAAATTCTAAGTGTTACACAAATACAAAGCATTGTTCTTAGATGATTGTGGATCCCAGGCATTTGTTAAAAACCCTAGACCCTCACAAAAATAAACACGGGTGGACCACCTGTCATTTCACCCAGACATCTGTCATGAGCCAGCACTTGTCCCAGGAGGACATAAACCAGGAATACCAATTCTCAGCACACAGAGATCCCAGCATCATTCCAGTATATGGATCTTGATTTCTGTTCTACACACCTTGTTTTCTGTTTGTTTGTGTTCGAGTTCCTGATCTTTTATCCAAATCAAATGAAGTGTTGCTGAGAGGCAGAATAAAAATGGTTTTAAGAAAGCTGGT EMBV3_04928 AAGGTCCCTTTTGGCTCTGACACCATTGCGTTGTTACGAGAATCCCCATTGACTTGGACC Gene BVV0102_180969 + 0 NULL GK000019.2:44271759-44284419 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097175 TCONS_00094014 2 XLOC_058188 XLOC_057327 Coding TCONS_00097175 XLOC_058188 Coding Coding DUSP3 19:44281111-44296156 j TSS72065 4232 1 TCONS_00097175_3 205 0.0666351606805293 4 0.718957724009572 0.00128598000084141 0.000124210087024972 0.00163476819883495 0.00115604910692787 0.000466704477187426 0.000111110051043363 0.000608431887144389 0.0012333937682182 0.000639761299767572 0.000204117653725364 0.000784879674536389 4.03298537614229e-05 0.000184415086543395 0.000310274180736581 0.000104786560467638 0.00127494155737445 0.000153193066358789 0.000202045836152271 0.000244600085048968 0.000864429724354768 0.000191552592034168 9.22250601891437e-05 0.000548448064809658 2.41041389244835e-09 0.000999324560572345 0.0011699908889062 0.000784823170729032 0.000219018834104593 2.79287771651046e-05 0.00010792495933549 XM_005220941.1 DUSP3 PREDICTED: Bos taurus dual specificity phosphatase 3 (DUSP3), 0.0 7589 100.00 0.994092627599244 NM_004090.3 DUSP3 Homo sapiens dual specificity phosphatase 3 (DUSP3), mRNA. 0.0 2058 76.96 0.644848771266541 TCONS_00097175_3 sp|P51452|DUS3_HUMAN DUS3_HUMAN Dual specificity protein phosphatase 3; 3e-134 379 98.37 0.892682926829268 1 coding 0 0 0 0 0.0985286823301733 0.669590625109859 -0.0409595035990408 0.488481680745771 ATAGTTACTCAGTTATGACATCAGGGACAGGTCCCCGGGGAAGAAAGAGGAGCAGTGGAGCATGCCTGGTTGTCCCTGGGCTTCTCTTTTGAAAGTTAACCTATGTCCCAGTCAAGATGAGGACTGAGGCTCAGAAGATTTCCCACCTATCTGGAATGCAGGGCCCTGCCGCCGCCATGTCGGGCCCGTTCGAGCTCTCCGTGCAGGATCTCAACGACCTGCTCTCGGATGGCAGCGGCTGCTACAGCCTCCCGAGCCAGCCCTGCAACGAGGTCACCCCCAGGATCTACGTGGGCAACGCGTCTGTGGCTCAAGACATCCCCAAGCTGCAGAAGCTGGGCATCACCCATGTCCTGAATGCAGCTGAGGGCAGGTCCTTCATGCACGTCAACACCAATGCCAACTTCTACAAGGACTCCGGGATCACCTACCTGGGCATCAAGGCCAATGACACACAGGAGTTCAACCTCAGCGCCTACTTTGAAAAGGCGGCAGACTTCATCGACCAGGCTCTGGCTCAGAAGAACGGCCGAGTGCTGGTCCACTGCCGTGAGGGTTACAGCCGCTCCCCGACCCTCGTCATCGCGTACCTCATGATGCGTCAGAAAATGGATGTCAAGTCCGCCCTGAGCATCGTCAGGCAGAACCGTGAGATCGGCCCCAACGACGGTTTCCTGGCCCAGCTCTGCCAGCTCAATGACAGACTCGTCAAGGAGGGAAAATTGAAACTCTAGGGCGCCCCCACTGCCTCTTCTCTAGAGGTCAGACGGGGGTGGGGGTCCCTGGTTGTGATGTCACAGGCTGCCATGTTTAGGAAACACAGTGTACCCTGCTCCCAGCATCACCAGGCACTTGCCCACACGTCTGTCCCAGCACGGCCCTGGGCCGCTTTTACCCTGGGGAGCATATAAAGAAGTTTGCTGAGGAGGGCGTCCTGCTCCCTGGCGTGTCCTGCACCTGCAGTTTATCACCCTGACGTCCTCACCCTGAGGTGGGGGCCCAGAGCGGGAAGGCCTGTGACAGGTGTGCTTCTCCTGGACGACCCAGGGCAAGAGGTCTGTGGAAGTGCAAGGCCTGAGATGCTCACGGGGGCCCTCCTGACCTCCCCCGCCCCCTATTCCGAGCCCCCACCCCTGAGCCCTTTCCTGAATGGGGCTCTGTAAAGGAACTATGCAAATGTGGGCCCCTCTCCCCCCACTGTGTCTGTCTCCCCTGAATCCTCACAGCCGTCCACGCCCTGCTCACAGAGACACGTCATGAGGTCTGAAGCTGGCTGGGGTCAGTTATCCGTGGGTGGAAATGCTCATCAAGTAACTGCATTTGACGATTTCCTTAGGATTAACGATACTGAAACAAAGAGGCCCTTGTGTGGGCAGACACATCCCCCTTCTTGAAGGACTCTCCTAGATCAATAGTTTGAAAAATGTGACTCCTTAGAAGGCTTGAGTTCAGAATCCGCCTTTTAGGGATACTCGGCTCTCAGTCCCTTGGTCGTTAGAAGAGTAGTTCCTTAGGCAGGGTTTTATTTTTCTTTTTTAGAAAACAGGGTGTTGAAGTCCAGCCTATTTAAAAACCCCACCATTTGGAGAATTACAAGGGTTTTGTCCTAAATTATAGTGTTGGCGGGCCCAAGCCACTCGTGCTCACTGCTTTTTGTCTCAGTTGCTATTCCAAGAACAGGAGGAGGAAATTGGCCAATTATAGCACGTGTGCCGCGTGTGCGTGAGAGAGCAACATAGCCAGTGGCTGGACAAACGGGGGGTTGAACGGCCCAGGCTCACACCCTGCCCACTCACAGGTAGTTCTTACAGCTCTCTGCTGCCAGAAAAGGTTCTGGAGCCTTGGGAGCAAAAATGATTCAGCCAGGCAGAAAGGAAACATGACGGAAGGTTCAAATGGCGCCTTTATTGATGGTAGAGCAAAGAAACAAAAAGAAACAGCCTTTGCAAGGACTTTTTAGGATGATGTTGGAAGCCATGAACACTCACACTCACACGTGTGTACACATTTGTCAGAATAGAGGAGTTTTGTTTTGAACACAGTCTTGTTAGCACTCGGCATAATTGTCATCAGGGCCAGCAACGCAGTGCCGTCGTCTTCAGGTTCCCTAATGGCAGAGAGGTGGTCCTCAGCTCTGCCCCCTGGCACTTAGCACATAGATGTTTGATAAAAGTTTGTGGAATTAAACTTTTTTTTTTTCTTTTCTTGAGCACCAAATATATGCAAGGCATTGTTCTGGTGGGTCTATCAAGCTCCCAGAAGCCTGGCTTGGTGGTAGGATCCCTTGCAAGGATTTGCAAAGGAGTCTTACCTGAAATGAAATATCAGGGACTTTTGTTGAATATTTAAAATTCAGTTTTAAGTTTCAATTCAGGCAGTGGTTCTGACCATGTGGAGGTGGGAAATGTGCCTTTTCGAGAATTGACCAGAAGCTTCCAGCTAGGTGGAGGAGAGGCAGGTATGCCTTGGGGCTTAACACCCAGGGGTAATGATCTCTATCTTGACAGAAGCAGCACCGCCCAGCCTGGATGTCCCCTTTGCTCTGTGACCGTAGCAGCCCTGAACAGACTAGAATCTGTCTTTTTCAGATACCAGGCTGCCCCCATAGACCCACCCAAGTGAAACGGCCTTTTCCCCCACTGTGTCCCTCACAGAGGCCAGATAACTCTTCCACTTCATCTAACTTGATCCTCACAATAACCTTATTAACTTGGTGTTGGGCTCATTCATGTATTGGTACCTTTAAGAAAAGGAACTGGGGTTCAGAGTGATTAGGGGTGGGGTGCTCAGGGCTTCCCAGCTCAAAGGCAGAGCTGAGGTGAAACTTCAGGTTGACTGCTCTCTGAAGCTGAATTCTTCCTCTCCTACTACACTCCTCCTCAAGAAATGAGCCCTCGGGAAGGTCTCAGTGCGCTGTGCATGCTGTTGACCCAGCCCCTGTGCACGAGGCCAATTAGCTTTGTAGCCAGAGGACAACAGGTCAAGCCATAGTGCCGGGGGAGGGGAGGGGGGCCTGCTACAGGAAAAATAAGAAGTGTGGGTCCCCAGTTGGGTTAGGATGTGTGGCTCTTCTCGGAAACACGTAGCATCCCTAAGTCAGAGCTTTCTGCTCCACTTCCGGAAGAGGCTCGAGAGCTGGGGCTGGGGTCCCTCTCCCATGCCCAGGCGGTGGTCCTCACACGAGACAGCCTCAGCTACTTAGGTCTGCTGACAGGACCTCTTGAAAAGCCTCTTTGTGTGGGGACATGTTGGAGAAAAGGCCATGGGGAGAATTACTGCCATCACTTTGGGGCTACTTTTCTGCTAATAACTTGGGATTTCTTCAGTCTTTAGTCCCAGAAACCCTATATTTCCTTCACGAAATGTGGCTCCTACTTTGAGTAAAAACAAAATCAACTTCTGTTGTGTAAGAGCCAACACATGCTCATCTGGACAGCTTCCCCCTCTGCCACCGGAAAGTGATGGAATAGGAACTCAGGGTGCCTCTATCCCCTCCTCTGACCTGGTCTCTTTCTTTGACTGGGAGAGCCCCATCTAGACCAAATGAGAGCACCAAATGGTTTTCTTCTCAGTTCTGAAGCAGTACATCTTCCACTGGCTTGTCTGTTTCCCTGCCACTCCAGGTTAGCTGGAGAGCAGAAATCACCATCTTTCAAGCAAGGGGACTAAACTTGAAGACCTCTAAGGTCCCTTTTGGCTCTGACACCATTGCGTTGTTACGAGAATCCCCATTGACTTGGACCGCCACCTGGAAATTATGGGGTGTGTAACAATGTGATGACCAGCAGGTGGCGCTGTGTTCCACTCATGGTGATGGATGCTTGGGCAAATGTTGGTGCCTTTTGTGTCACAATGTTAAGATGCTAATGTTTTAATCGAAATAAGCACTGATCTTAAAATATGAAGATGTTAGCTTTTCTCGTAGGAAATTTTCTGTCATAAAACCGGCATCAAGAATCACTGAAGAGCTGACAACGATGGTCCTTCCAAGTCAAGATTTTATCCTGACTGGAAAGGGAGGCCATCTCCGGTTGAGAGAATAGATTGGTTGGAAGCTTAACTTACCTGCTGTCAGCTTTTAGGGTAATTTGACTGTGAAAGCATCAATTTTCTGGACAGAAAAGGGAAAGGTATTAAACTGGTTTTAAAAAAAATAAGTTTAATGTCTGTCATATCACAAATTAGTGTTAAAACACTAAAACTGTAACCAAAATAAATGTCTTATATTATGA EMBV3_18733 AGCCTCACCCTGCAAGAAATAATCAGTGGTGTCCTGCCCAGGCTGGTTGAGCTTATGAGC Variant GeneID:789280|KPNA7:NM_001163947:353_cdna 363^977 2 EMBV3_13525 GeneID:789280 25 GENE KPNA7 NULL karyopherin alpha 7 (importin alpha 8) EMBV3_33343 GAGTGGGCAAGGAGAAGGGGGAGATTCCTGGTCAAGGTTTCCAAGCTGAAGTAAAGCCAA Gene BVT0102_403572 - 1 EMBV3_02912 GK000004.2:62349342-62384965 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05586 CTCATCTGGGACACTGCTGGTCAGGAACGGGATTCATTTCATACCTTGAAGAAGTGGGTG Variant GeneID:616979|RAB31:NM_001076944:197_cdna 163^234 1 EMBV3_38647 GeneID:616979 24 GENE RAB31 NULL RAB31, member RAS oncogene family EMBV3_19917 CCTCGGGGGAGTTCAGTCTTCATAATTCCATCCGGAGACCCAGATTGGGAACAGAAAGAT Gene BVV0102_393956 + 1 EMBV3_07381 GK000019.2:34293643-34339884 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20834 AGCTTGAGGTGTTTCGGATGACCATCTACCTCACCTTCCCTGTGGCTATGTTCTGGATTG Gene GeneID:789021|LOC789021:XM_002692764:121_cdna Constitutive 0 NULL GeneID:789021 14 GENE LOC789021 NULL similar to HC12887 EMBV3_23414 TCACGCTGTTCATGATTTTTCTCTGTAGAAGGGATAGAGGAATACAGTTGACCTCCCTGG Gene GeneID:521189|SLC11A2:NM_001101103:80_cdna UTR3_Alt 2 NULL GeneID:521189 5 GENE SLC11A2 NULL solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 EMBV3_16708 CTTCGAGGCTGACAACGAGGACGATTTGTTTGAGTCCATCCTCCATGACGACGTGCTCTA Gene GeneID:507041|PRKCE:NM_001111120:59_cdna UTR3_Alt 2 NULL GeneID:507041 11 GENE PRKCE NULL protein kinase C, epsilon EMBV3_12156 TTCCCTTGAGGCTCAGCTGGTGAAGAATCTGCCTGCAGTGTGGGAGACCTGGGTTCGATG Gene BVV0101_091291 + 0 NULL GK000029.2:40148838-40175607 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015199 TCONS_00031435 TCONS_00005968 TCONS_00006087 TCONS_00066437 TCONS_00185008 TCONS_00142699 TCONS_00057214 8 XLOC_008435 XLOC_017683 XLOC_001531 XLOC_001650 XLOC_041150 XLOC_111479 XLOC_087124 XLOC_035013 Coding TCONS_00015199 XLOC_008435 Coding Coding FCF1 10:86384126-86397918 j TSS10774 3920 2 TCONS_00015199_4 115 0.480357142857143 7 0.71626423029512 0.000169902202347142 0.00010526194792008 0.000155193128900387 3.78650320518269e-05 0.000118620306790415 1.83147692032557e-05 6.22149815912525e-05 3.62514282407807e-05 0.000156816858638785 9.39484664924702e-05 5.69322140732554e-05 7.42645274255719e-05 8.35357278483683e-06 0.000399426216953136 6.6403338313098e-05 0.00110630124960475 0.00139326236111048 0.00208510135041713 7.40754455055566e-05 0.000148746706844224 0.000241634428439712 0.000607305117774295 0.00124970874829633 0.000817560040765437 2.51119886945686e-05 6.50062934201729e-05 4.61560132899701e-05 0.000115366744247338 8.94466694429326e-05 8.5054276254398e-05 NM_001037452.1 FCF1 Bos taurus FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) (FCF1), mRNA. 0.0 697 100.00 0.0982142857142857 NM_015962.4 FCF1 Homo sapiens FCF1 rRNA-processing protein (FCF1), mRNA. 7e-137 493 89.36 0.0946428571428571 TCONS_00015199_2 sp|Q32PD0|FCF1_BOVIN FCF1_BOVIN rRNA-processing protein FCF1 homolog; 7e-63 193 100.00 0.989130434782609 1 coding GGAAGTGGCGTACGGATGATGCAAACGAGCCGCGCCGCCGGTGATTCCGGAAGAAACAAGAGCGCGGCGTGAACATGGGGAAGCAAAAGAAAACACGGAAGTATGCGACCATGAAGCGAATGCTTAGTCTCAGAGATCAGAGGCTTAAAGAAAAGGATAGATTAAAACCGAAAAAGAAAGAAAAGAAAGATCCCAGTGCACTCAAGGAAAGAGAAGTGTATCCCTTGTATAACTGACTGCGTAATGGCTGAAATTGAGAAATTGGGGCAGAAATATAGAGTGGCTTTAAGGATTGCCAAGGATCCAAGATTTGAACGATTACCGTGTACACACAAAGGAACCTATGCAGATGACTGCTTAGTACAAAGAGTAACTCAGCACAAGTGTTACATTGTGGCCACAGTTGACCGGGACCTTAAACGAAGAATCCGGAAGATCCCTGGAGTTCCCATCATGTACATTTCTAACCATAGGTACAACATTGAGCGGATGCCAGATGATTACGGAGCCCCTCGGTTCTAATGAAAAGGGAAACTTTGTCCACCTTCCTTTGACCTGTTTTCTCTTTTGCAAGTTCATTAAACATGCTATAGTGTGAATTACTATTGCACTCACCCACTTGCTCTATAATGAGCTGAGTTACAGTTAAATATACTCACTTTTTAATGTTGTTTTTAAAATTATATTTTGTGTCATTTTAAAATTTGCTGCATCTTTTTATAAATCAGAAAACTTCTCACATGATATGATGGTCATTTTATATTGATTTGCTGCTGCTGCTAAGTCACTTCAGTTGTGTCCAACTCTGTGTGACCCCATAGACGGCAGCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCGTTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTCAGTCGTATCCAACTCTTAAGGTTATGCTAAGCATTTAATAACATGTGCTCTTATCCTCACGATATTCATATTATGGTAAAAGAAAGACATGTAGATGAAAAAATACAGTAAAATAATGATGCTAGGATAAAAGTATGAGGGAGTAGACAAACAGGTAGAAAGAATGATTTCTTTCTACTTGGTTGGGATAGGGAGAGAAGAAGGACTGAAGGCAGTTATGTTTGGGTTAATCTTGAAGAGAGCTAGAACATAGAGGGGAGGGGTCTGTGCTCACATCTGAGACCCCAGAGGTAGGAGGTGGGAGGGAGGGGGCTTTATATGACAGGCTGAAGGGTTTGGACTTAATCCTGAGGTCAACCTTCATTAAATTTTTAATTAGGATGGATAACATGATCAGATTAGATGTTTTACATGATCACAAGACAGTATAAGAACAAACAAATAGATCATTGAAACAGATTAGAAAGTCCATAAACAGACCTATGTATTTATGGTAATTTAGTATGTTATAAAGCTGGTATTAAAAAATTTTTAAATCTATGGGAAAAGGAAATTGCATTAGAAGGCCAAATATTGTGGGGTTATCCCACTAGGGTTAGGATCCTGACTTCAGCAGTTAATATCTGTATGAATTGGGAAAATTACATAAGCATTTGATGCTTTCCTTGCTTCCCTTTAAATGTTTTATTTAGGGACTTGCCTGGCAGTCCAGTAGTCAAGACATTGCACTTTCACTGCAGGGGGCCTGGGTTCAATCCCTGGTTGAGGAACTAAGATCTTGTATGCCAGGAATAGCCAAAAAATAGAAAAAAAAAAAAAAATTTTTATTTAATCCTCAAAACAACCCCAACAAGATAGTATTGAATAGTACCCGATAGAAGTGTTATTCAGTAAATGATAGTGATGACTGTATTATAATAACAAGTTGACTATCCACTTGAAAAAAAGTTTATATTTCTACCTCATATCCTTCATGAGATTCCTCATATCCTTCAAGTGGATCAAAGTCTAAATATTTTTTAAGCCATGAAGTGAAGTGAAGCCGCTCAGTTGTGTCTGACTCTTTGTGACCCCATGGACTATATAGCCTATCAGACTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTGCTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGAATTGAACCCGAGTCTCCCGAATTGCAGGCAGACGCTTTACCGTCTGAGCCACCAGGGAAGTGTGGAAGTATTCAACTCAGTTCAGTCAGTCTTGTTCGACTCTTTGCAATCCCATGGACTGCAGTACTCCAGGCTTCCCTGTGCATCACCAACTCCCAGAGCTTGCTCAGACTCATGTCCATCAAGTCAATGATACCATCCAACATGGAAGTATTAGAAAAAGAAAAAGGAAAATGTATATAAGCTCTGAGTAGAATTCTTAAAGAGGGCTTCCTGGTGGCACTAGTGGTAAAGAACCCGCCTGCCAGTGCAGGAGACGTAAGAGACGCAGGTTCGGTCCCTGGGTTCGGAAGGTCCTCTGGAGGAGGGCATGGCAATCCACTCCAGTATTCTTGCCTGGAGAATCCTATGGACAGAGGAGCCTGGCAGGCTACAGCCCATGGGGTTGCAGAGTCGGACATGACTGTTTGAAGTCGTGTCACTGAAGTGACTTAGCAGCAAAATTCTTGAAGAAGAATGTAAAAGCCATAAAAGAAAAAAGTGTGGATACATTAAAATTAGATTTATCTGCAAAAAAGAACTTCCCCCAAACTTAAGACAAATGACTGACAAAATTTTCTAATATATATAATAAGGGTGTAAGGACATGGGTAGTCCTGTAGTGCTGACAAGAAGGCAAATAAGTAAAACCATTTTGAACAGCAGTTAGGATCCTTTGGGCTTCCCTGATAGTTCAGTTGGTAAAGAATCCACCTGCAATGCAGGAGATCCTGGTTCAATTCCTGAATTGGGAAGATCCCCTGGAGAAGGAATAGGCTACCCACTCCAGTGTTCTTGGGCTTCCCTTGTGGCTCAGCTGGTGAAGAATCCACCTGCAGTGTGGGAGACCTGGATTCGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTAGAGAACTGTATGGACTGTATAGTCCATGGGGTCGCAAAGAGTCGGCCATGACTGAGTGACTTTCACTTCACTAGGATCCATTAAAATAAAAATTACAGATGTCATGTGAGCCTGATTCTCTCTTTTAGTTTATAGGTATCATATAGGTGATTTCCTTTAAAATACATCATCAGTGTGAGATAAATGCATGATAAATGTAAATTTCACATGTGTGTACAAGGAAGTGTATAGAAAGAGGTTTACTGCACCACTATAACAGAAAAATTGAAAAGAATGTAAATATCCATCTGAAAGTTTTAACTATGTTACATTTATACCACGGAATGTCATAAGCACTTAAAAACAATGAGATAGATTTAAAAGTAAGACAAAGGACTTGAATAGTCAGTTCTCTGGAGAAGACATATAGATGGCCGAAAAGCACATGAAAAGATGTTCAATATCACTAATCGTTAGGGAATTGCAAATCAAAATCACAGTAAGTTACCACCTCATACCTATTAGGATGGCTGCAGTTAAGAATAACTAAATAACAAGTGTTGACAAGGATATGGGGAAACTGGAACTATTGTGTACTGTTGATGGAAATGTAAAATGGTACAGTTGCTATGAAAAATAGTACGGTTCCTAAAAAAATTTTATATAGAACTACCATATAATCCAGCAATTCCACTTTGGGTTATATATACAAAAAAATTGAAAGCAGGATCTGAAAGAGATTTGTATACCCATGTTCATTAGCATCACTATTCACAGTAGTCAAGAGGACAAAGCAATGCCAGTGTCCTCAACAGATGAATGAATAACCAAAATGTGGTATATACACACAATGGAAAGTATGCAGCTTT EMBV3_39260 TTCCATCTGTTGCTTATTAATACTGTTTACACGTGGGGCCTTGGTGAGGAGCCAGATGGG Gene GeneID:508301|GMEB2:XM_002692402:343_cdna Constitutive 0 NULL GeneID:508301 13 GENE GMEB2 NULL glucocorticoid modulatory element binding protein 2 EMBV3_24130 CTCGCTCGCATGGAAAACCAGGCCTTTGACCCTGGCTCATGTGGCGCTTCATCCACTCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34739 CTGTCTACTTGTTGCTTCTTGGTCACAAGGCGGCTGCTGTATTTCTAACCTCAGCTACAC Gene BVT0102_127422 + 0 NULL GK000019.2:49292990-49312495 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097494 TCONS_00097489 TCONS_00097495 TCONS_00097492 TCONS_00097491 TCONS_00097490 TCONS_00097487 TCONS_00097493 TCONS_00097488 1 XLOC_058261 Coding TCONS_00097488 XLOC_058261 Coding Coding POLG2 19:49311097-49317905 j TSS72222 2004 4 TCONS_00097488_4 57 0.322355289421158 4 0.706184809754664 0.00107311489401183 0.000955179630056296 0.000953562292215759 0.000270668310333364 0.000667155679103683 0.000136218463003135 0.000341179808367893 0.000275232975773673 0.001100150677673 0.000165017787032456 7.08517852295846e-91 1.24395329224397e-05 5.12022910794943e-06 0.000151475878550125 0.000163914502363864 2.86167762727708e-319 0 9.08556016236045e-72 0.000848913837592496 0.00148950279459318 0.000600481110582981 0 6.42286234132217e-93 0 0.000428947514488864 0.000794452710078792 0.00110165513676168 5.55496820739495e-78 4.43721708846435e-05 0 XM_005221015.1 DNA directed PREDICTED: Bos taurus polymerase (DNA directed), gamma 2, accessory 3e-151 540 100.00 0.148702594810379 NM_007215.3 DNA directed Homo sapiens polymerase (DNA directed), gamma 2, accessory subunit 2e-114 417 90.97 0.148702594810379 TCONS_00097488_1 sp|Q0VC30|DPOG2_BOVIN DPOG2_BOVIN DNA polymerase subunit gamma-2, mitochondrial; 6e-28 104 100.00 0.980392156862745 1 noncoding 0 0 0 0 0.712878047123567 0.0135314183922268 -0.0386041340299227 0.454239017856794 CTTTACACAGGATAGTGTTATATATGGGCTTCCCGGTAGCTCAGCTGGTAAAGACTCCACCTGTAATACAGGAGACACTGGTTTGATTCCTGGGTTGGGGAGATCCCCTGGAGAAGGGATAGGCTACCCGCTCCAGTATTGGGCTTCCCCGGTGACTCAGATGCCCTCCAGGTGTTACTGAAGCTAAAGTTGGAGACACAGTGCTCTAGTGCAAGCACAGGCTCTCATGTGACCCTTCCACTCGCCATTACCTTCCCCATCCCCACCACGGACATTTGGTAAAGTTTGCGAACAGTTTCGGTTGTCACAAGGGCTGTTTAATGAATTACTGGAGAATGGAATTTCTGTGTGGCCTGGTTATCTGGAAACTGTGCAGTCTTCACTGGAACAACTTTATTCAAAATATGATGAAATGAGTATCCTCTTCACAGTGTTGATTACTGAAGCTACTTTGGAGAATGGATTAATACAGTTGAGAAGCAGAGACACCACAATGAAGGAGATGATGCATATATCCAAAGTAAAAGACTTTTTAACTAAATATATATCATCAGCTAAGAATGTATAGATTTCAATATTTGTATAATAAATATTCACCTTTCCTAAGTTGGTTGTCTTATTTAACTTTCTTGTTGTTTAACCCTTTTGCACTTAAGAAGTGGATGTTTTTGGTGCTTTGTTTTTTCATTGTTTTTACTACTTCTTGATGTATTTCATGGTATCAGGAATATTTTCAACTATAAGAAAAAGACTACTAGATTAAGCAAATTGGGGATTGTTTTTCTAATAACAAGCGATCAAGGGTTTAGACTGTCCGGAGCTGGTATAATTTTTTCCTCTATAGTAGTTAGGGACCGAAGCTCTTGCTGTCTTTCCACCATCTTCAGTATATGGCTTATATCTGTCTACTTGTTGCTTCTTGGTCACAAGGCGGCTGCTGTATTTCTAACCTCAGCTACACTCTAGTTAGAAAGAAAGTCAAAGAGATAAGAACTAGCCAACCATGACTCTCTCCCTTTTTAATTAGGAAAGTAAACGCTTTCCCAAACATCCTAATCAGAAGACGTGTTTACTTTTATTCATCAGAACTGAATCACACGATCATTACTAGGCCAGTCATTGTCCAAGGGCATGAGGATATCATGATTAATTTGGATCAAAGACACTTTATCTTTTGGTGCTACAGTACTGTCTTTTAGTCTCTGAAATGGGTTTTGTTGTCAGGAAAGCAAAGGTCTTTATGTACACTCTCAGATATCAAAAGATTAACCTAAAACTAAATTAGAACATTTATTGATTTTTGAAAAGCAAGCTAAAATAAATGTTAAATGGCGTAGTCTAATATTAGTATCTCATTCTATAAACGTTTATGTGCTGATTATGTTTGTGTTGACTCTGTTGTCATTGCCAACTTGGCAGATATCCCAAATGATGATTTATATACAGTGTCTCGAAAGGTTGGCTAACTTGTCTGAGTTGACCTTACCTAGTAGGTTTTTAGTTTTTGCTCTTGGGGAGAATTTCAAACACAAAGATATCTACAGGACAGTATAATTAACTCCATGTGCCTATCACCCAGTACCAATAACCATCAACCTATGACCAGTCTTGCCTCATCCACCCAACACCACCCTTCCATATTATACAAAGCAGGTCACAGCTATCATTTCGTTTGTAAATATTTTAGTTCAGGATCTTTTGTTAACCATTTTCATGCCTGAAAAAATTAACACTAGATGATATTAAGGAATTATTGAGAATTTTCTTGAGTGTGATCATGATATTATGGCTTTATTTTTCTTTTTAAAAATCCTTATCTGAAAGACATGTACTTAAAAATTTTTGAGATAAAAATATATGATATCTGAGACTTGTTTTAAAATTTAGTTTTAAAAAAGTGGTAGAATATAGGTGAAAAATAAGGATAGTCCTGAGTTGTTGAGTTATGGGTACATGGGTTCACTGTCCTGCTTTTTGTGTATGTCTGAGGATTATAATAAACAG EMBV3_27716 ATTGTCGTCCTTGTTCTTGGTGTCGTCTGCGTTGACTGTGGTTGGATGCATGAGAGACTG Gene GeneID:533979|MPRIP:NM_001105627:72_cdna Constitutive 0 NULL GeneID:533979 19 GENE MPRIP M-RIP MGC159807 myosin phosphatase Rho interacting protein EMBV3_19096 TGCCTGTCCCCACCTCCTCAATGGAAGGACAACCATTTGTACAGTCCAGAGATCAGTTAG Gene BVT0102_134311 - 1 EMBV3_27769 GK000007.2:13506236-13543658 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219031 1 XLOC_132350 NonCoding TCONS_00219031 XLOC_132350 NonCoding NonCoding - 7:13521437-13524721 - TSS163029 3284 1 TCONS_00219031_1 153 0.606881851400731 1 0 9.52895479584877e-05 1.22392697266903e-05 1.12716266791931e-05 0 4.51021033143606e-06 1.08924081247829e-06 0 0 0 0 0 0 0 2.86479360806989e-06 0 0.00120637614018168 0.000535883177796534 0.000351456058963504 8.07931093245361e-05 3.06578121269728e-05 9.29024900223651e-05 0.0003705805053637 0.000310084323404063 0.000260352098114121 0 1.07269662296309e-05 0 0 2.36521553349186e-05 0 XR_231610.1 LOC101906392 PREDICTED: Bos taurus uncharacterized LOC101906392 (LOC101906392), 0.0 2888 100.00 0.48721071863581 0 noncoding 0 0 0 0 -0.177284426713243 0.245164220526336 -0.0461207698126078 0.365818819182861 GTTTCTTGGTGTGACGGAAGCTTCCTGCAGATGGGTAGTTGGTGACGGTTGCCCAACCTTGTGTTTCTCCTAAATGCCAGGGCCTTGTACACTTTAAAATGGTTAACTTTATGTTCATATATTTTGTCTCCATTTTTTTTAAAAGGAAAGAAGAAAAAAGAAAGAAAGATAGGAAAGTTAAGTGTGCAGGCTACACTGAGAAAAGAGATGAGGGGTCAGGGACACTGAGGTATGAAGTTGGGGCACATCTCCAGACCCAGACAGTGACAGATGATGGCACCAGGGAGGGACAGGGAAAAGCAGAGGAAAGGGAGAAACAGGAGGTAGGGTCCCATGACTGGTTAGATGACAGGGTGGTGGTGGTTCATGGGATGCTTCTGTCTCATCTGTCAGCTCTGGTGGGTGGCCAGGGGTGGGGATTACTCGAGGCAGATCTAGGCTTCCTGTCTGTGACCCTGCTGTGCCTCCATCAGCCTGCCAGTCTCAGCGCTCAACCCCATATCACCTTGAAGACACGAACGTCCCCTCCCCGGGGGGTATCCCCATCACCCTCTCCCTAGTGTTAATCATCAGAACCTTCTGCGCGTCCCCATGCCCCTCCAACACCGACTCCTTCTGACCTCTTTGCTGTGCCAACCAGTAGACACCCCCAAAAGCCCCAAGTCAGCATCAGCTGACATTCAGACCTCAGGCTCCTTTAGAGCAGGGGTCTACAAAGATCTGGAAAGGGCTGGACTGGAAATATTTTCTGCTTCAAGGGCCAGGCTGTCTCTGTTGCAATGACTCAATTCTGCTTTGTAGCATAAAAGCAGCCCGGGATAATAGGTAAACAAATGAGCACAACTGTGTGTCAATAAAACTTTATTTATGGGACTTCCGTGGTGGCCCAGTGATTAAGACTCTGCCAGTTCGATCCCTGCCGCGAGCCACTGAACGACTAAGCCCAAGCTCCACAACTATGAAGCCGAGGTACCTAGAACCTGTGCTCTATAATGAGAGAAGCCACCACAATGCCCCTGCTCGCTGCAACTAGAGAAAGCCCATGCACAGCAATGAAGGCCTACCAAAGCCAAAACATAAATTAAATTTTAAAAACAACTTTATTTATGGACTCTGACTTTTCAGATAATTGTTTTATTTTTTATTTATTTGACTGTGCCAGGTCTCAGTTGCAGCACCTGGGCTTTCCATCTCCATTGCAGCATGAAGGCTCTTTTAGTTGTGGTATGCAGTATTTTTAGTGGCTACATCCAAACTCTTAGTTACAGCATATAAACTCTTAGTTGGGGCATGTGGGACCTAGTTCCCTGACCAGGGATTGAACTCAGGCCCCCTGCCGTGGGAGCACAGAGTCTTAGCAAATGGACCACCAAGAAAGTCCCATGGACTTTTTAATTGAAATATATTTGACATGTAACATTGTATAAATTTAAGGTGTCCAACATTTGATACATTTATATAGTATAACTGACATATATTGTAATATGGTTGCGATTGTATCCATAATTAGCACCTCTGTGAAAGTGTTGGTCTCTCAGTCATGTCCAACTCTTTGTGATCCCATGGACTGTAGCCCACTAGGCTCCTCTGTCCTTGGAATTCTCCAGGCAAGAATAATGGAGTGGCTAGCCATTCCCATTTTCAGGGGATCTTCCCAATCCAGGGATCAAACCTGGGTTTCCTGCATTGCAGACAGATTCTTTAACGTCCGAGCCACCAGGGAAGCCCAGATGTTATATAATCAACATTTCTTTTTAGTGGTGGAAATAGTTAAGTTGCTAGTCTCTTAGCAAGTCTGATGATTATAATACAACATTTTAACTTGTATTTACTCTTCTGTGCATCTGTGGAATTCTAGGATTTATTTACTACTCAGTCCAAGTTTATACCCTTCAGCAAAGTCTGTTCTATCCCCCCCAGCTCCTTGGTCACTGAAATTTGAATTGTAGATCATTTTCAAATTGTGAATTGTTTTTTCCAGCCATTTGAAAATGAAAAGGCCATTCTTAACTCACTGGCTGTACAGGAACAGGCAATAGGCTGCATTTAGCAACCAAGGCTGTGGATAACTCCAAACTATCTCTTGCCCACATTTGCCCCTTATAATAGTGTATATCAGGGAGTCTTGGGTATCTTTATAAGGGCACTAATCCCATTCACAAGAGACCCACCCTCATGACCTCATTCCCTTCCAAAGGCTGTACCTCCTAATATTATCACCGTGGTGGTTAGAATTTCAATACAGAGTGAGGGGGTGGAGACACAAACATTCAGACCACAGTTGTGAGTATCCAGGGTTTTTTTTAAATTAGTATTATTGGCAATTCTCTGGTGGTCCATTGGCTAAGATCCCAATACAGGGGCCCGGTTCAATTCCTTGTCAGGGTACTAGATCCCATGTGCCACAACTAAGACCCACTGCAGCCAAATAAATTAAAAAAAAAACAACTGCTCTGAGACACTGCCTTGACACCTGGGATACCAGGTCTCGTCATCACGGCCACAGTCAGAAAACAGAAAACTCCTAAGCACTCCCAGGGTCCCCAGCTGCCCAGGAAGAACAGGTTGGCAGAGGCCAGATGAGGGGCTTTCCAGTGACAAACACAGACCTCCCTTCCACGCCTCCACTAGGAAGAATATTCAAACATGTCCCTGACTATCTTTCTCAATTAGCCATCACTCTGCTTTCCCCCAGCACTCTCTCCTCTCATAACCCCAGTGTATTTTCTTAAAGGTGTTTATGTTTTTCAGAGCTTATTAGTGTATTTAAGCATCAAATATTGCCTGTCCCCACCTCCTCAATGGAAGGACAACCATTTGTACAGTCCAGAGATCAGTTAGGAATAAGTCTCGGTTGGGGTTGTTGTTGTTGTTCAGTGGCTCAGTCATATCTGACTCTTTGCTACCCCATGAACTGCAGCATGCCAGGCTTCCCTATTCTTCACCATCTCCCAGAGTTTGCCCAAACTCATGTCTATTGAGTCAGTGATGCCATCCAGCTATCTCATCTTCTTCTGCCCCCTACTCCTCCTACCCTCAATGTTTCCCAGCATCAAAGTCTTTACCAATGAGTCGGCTCTTTGCATCAGGTGGTCAAAGTACTGGAGCTTCAACTTCAGCATCAGTCCTTCCAATGAGTATTCAGGACTGATTTTCTTTAGGATGGACTGGTTTGATCTCCTTGCAGCCCAAGGGACTCTCAAAAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCTGGGCTGGGTGGTCATAACAATTTCACTCTGCCTGTGTAG TCONS_00211848 TCONS_00211849 TCONS_00211850 . 3' 15203 TCONS_00211848 TCONS_00211849 TCONS_00211850 . 3' 18486 EMBV3_21196 CCGCTTCCCTCTGTGAGTCAATGCATCGTGCTGCTGTGTGTGTATAGTTTTTCTGTGTGC Gene GeneID:534655|SIAH1:XM_002694877:877_cdna UTR3_Alt 1 NULL GeneID:534655 18 GENE SIAH1 NULL seven in absentia homolog 1 (Drosophila) EMBV3_37114 CAGCTCTTCGGCAGCATGGCCTTCACTGGCAAGTACGAGACTGAGAGTGAGAAGAACTAT Gene GeneID:514650|FABP6:NM_001075675:22_cdna Constitutive 0 NULL GeneID:514650 7 GENE FABP6 MGC127120 fatty acid binding protein 6, ileal EMBV3_36041 CCATGCTCCAGAGCTTCAAAGGGAAGGTCATTGTCATCGTGGGGAATGTGGCAAAGCACA Gene GeneID:528650|TBCK:XM_002688086:135_cdna UTR3_Alt 2 NULL GeneID:528650 6 GENE TBCK NULL TBC1 domain containing kinase EMBV3_27067 TTTCAGAAGAAGGCTTAGTGATCCAAATAAGTCCCTGGCGGTGGTCAGGAGAGCTCAGTT Gene BVV0102_192659 + 1 EMBV3_34450 GK000007.2:33313091-33463750 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212787 TCONS_00212788 1 XLOC_130254 NonCoding TCONS_00212787 XLOC_130254 NonCoding NonCoding - 7:33395864-33499423 - TSS159563 942 1 TCONS_00212787_2 79 0.466029723991507 5 0.990951930319241 0.000302523121638172 0.00035172715203491 0.000793491451874466 0.000783810464688119 0.000183852242655211 1.00631652349553e-12 3.58167201371295e-08 2.62206892676735e-11 0.000385950940761986 2.89051709832188e-56 1.21444498459196e-18 9.97371518638477e-22 1.60108678604295e-53 5.75707099502913e-46 2.04172559565539e-05 3.12583763859842e-18 7.84444603269058e-19 3.2474824754449e-19 0.000998986948757233 0.00114802427367422 1.59075121876982e-07 1.54501726650003e-18 1.06026265565469e-17 1.07247438710606e-18 0.000706244677951756 0.000217308162343943 6.56877563072717e-09 4.34040198975192e-54 5.25726316955748e-14 2.04363534356126e-18 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 5e-106 389 92.19 0.278131634819533 0 noncoding 0 0 0 0 -0.0360674412466648 0.791264703426165 -0.00541151954360732 0.930352227223047 GCTTTTCAGAAGAAGGCTTAGTGATCCAAATAAGTCCCTGGCGGTGGTCAGGAGAGCTCAGTTTTAATCTTGTGGTCGAAAAACTAATCTTAGACCAGTCCTCTACCCTTCGTATTGGTATTGCTCACTGTCTGCATTACTATGGAAAATTACGCATTGTTTGTATGGATACTGCAGGAAGAACGAGGGCGCTGCAGCCATAGGCCAGCACTAGGCAACAGCCCTGCAGCCCAGTGAGTCCAGTGAGGGCATGGGGCATGACTGGAGACTGAGGCATCGGAGGAGGAGGAGCAGTGAGCATGGCCTGGGAAGGAGCTGGCAGCAAGCAGTACAGCAATTTGGCTGGACAGCAAGAAAAGCTACTTCTCAAATTCATGCCAAGGCACTCAAAGGATGTGACAGGAAGAAAAGAGAGATAGCCGTTCTGACACCAAATTTGAGTGCCAGTCATTCCATTGTCTGGGGAACAGCCAGCAATAGACAAACGTAATTAACTACTAATGAATGCAACTTTATCTGGTACCTTCGGAAGGTGGCGTCTGTTTTAAGAAAAATCACCCCTGGAGAAATAAGTGTTGACTGACCGCTGTCACAAGGAGAGGGTCATAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTATGAAGCACCTGACTTTGATAAAAGTTAGGACTGCTGACCCCGCGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTCCTCGAAATACTGGTCTCCCCATGTCGTTCTCTCTCTCTCAAACTCTGGCTGAGTCTCCATCTGGAGCGCGGAGCCCGCCGTGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTTGGGAGAACGGAA TCONS_00216389 r 5' 82775 TCONS_00216389 r 5' 82775 EMBV3_16293 TCTGGTGCAGCATCTGTCTAAAGCATTCAGATTGGACACCCCGCTTGGATTCTGATCAGC Gene BVV0101_018448 + 0 NULL GK000011.2:103535052-103572294 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029293 1 XLOC_015706 Coding TCONS_00029293 XLOC_015706 Coding Coding LOC100848674 11:103560774-103568302 j TSS20393 1728 1 TCONS_00029293_4 150 0.100694444444444 10 0.771755015278331 0.000197667216281436 0.000237277390092043 0.000220929753842695 0.000129453390230409 0.000217730968758194 2.13003172128679e-06 0.000131752838032388 4.44973236468656e-05 4.87239239810895e-05 0.000269417182387219 6.30022250568551e-06 0 5.47951927031531e-05 5.44444065871014e-06 3.86405415682152e-05 0.00103407164833067 0 0.000533082820815626 0.000300002395947909 0.000790322581275471 2.43976281298497e-05 0.00031114646580084 2.12362238080329e-05 0.000169956728723346 0.000159471986831021 0.000400946499586931 0.000213191711985468 3.33513106183967e-05 2.24750252275299e-05 3.82723415346079e-05 XR_228393.1 LOC101902851 PREDICTED: Bos taurus uncharacterized LOC101902851 (LOC101902851), 4e-09 68.0 71.07 0.0902777777777778 NM_144653.4 NACC2 Homo sapiens NACC family member 2, BEN and BTB (POZ) domain containing (NACC2), mRNA. 9e-125 452 78.18 0.333333333333333 0 coding 0 0 0 0 0.113803329466119 0.506395873766655 -0.0407265352737982 0.578673730374045 ACGAGAAGGAATCTGATGCAGCATCTGTCTAAAGCATTCAGATTGGACACCCCGCTTGGATTCTGATCAGCGCTTCTTCGTTAGCGTTTTGCACATGGTTGTCATTTTTATGTCAAAAGAAGCCAAAACTTGCAATACTATTTTTAGCAGACAAAAAATAATAAAAACTAAATATAAACCGTATAAATATTTTTGACTTGAACATTTGAATGGCATTGGGTGCAAATAGACCATTCATCCTTTGGACGGACTGTTTGGGGAAAAGAAAGAGACTTTTGCAAAGGAGACGGTTGTTGTTAAAGAGTCCGTGGAGGGGTTAAGTAGTACTGTAACTCACGACTGTTAAAAATCAATAAATAAATTGTCCTGTGCTGTATAGGAGGCCTGTTTCACAGTAACACTGAGTTCCATTTCAGCCTCAGAAGAGACTGGCTTTTTTTTTTTTCTTCTTCTTTTTATTTTTTTTTTTAAAGAAGGAGGAAACCTCTGTTTGTTCCTCCTGCGCCTCCCTCTCTTTCGTGCTGCTACTTGGCAGAATTCAGACTGTTGCTTTTTCGCCACGGCTGACACCCTATCATAACTCAGAGGACACGACGACGTCCGCCAGCGACCAGGACCCAGAGGGCTTGCATGTCTTAGAAGGGAAGGGGGCTGGTGGGCAGGATGTCGACTGGGGCGCCTGGCTCACCTGCCTGCCCCCCGAGGCGTGCAGCTGCCTCCCACCCGGCCCTTCCCCTCCTCTGCTCCTGGGCCAGGTCCGCCCCCAGCTGGACGAAGTGGGAATTACAATTTCCCCAGGGCTGGTTCGCAGATTCAGGCGTGGCAGCTCTGTCCACCCTTCACTCCACTGCTATACCGACAAGGACCTTTTTGGGCTCCAGCGGTGGGTGCGAAGTCAGCAGGACCCGGAGCTCAGCCAGGAGCCCTTTGTCCTCCGGAACAAAGGGTCGGAGCCCAGGGGGGTGACCGGCCCTCTCCGGATCCGGGTGGACACTGTGGGTGTGTCCTTCCTGGCCCTGAAAGACCATCACCGCTCCCTCAAGGCATCCCAGTGGGGGGCACCCAGCTCCGAGATCTTTTGTGCCACACAGGTCGGGCACATGGGGCTGGGGGACACGCGGAAGGCGGGTCTGGGGACACGGCGCAGACAGGACTCCTGCTGTGACGGAGACTGGCTGCAGGGGTACCGGGACTGCAGAGATTCCTCCTGCAGAGGCTGGACTACCACGTGTCTGGACCGCTCTGGGGGCCCTGACCAGGGAGGCAGGCCTGGGTCTGGTCGCCACCTACTCCTGCATCAGAAGCAAGCTGTGCATGTCACCAATGTGGGAGCCCCCCGGGTAGGACTGGAGCGGGGTGGTGCCCCAGGACCTGTCCAGTCCTCCACTAGAACTCGCAGCACCTCCGTGCTGAACTCAAGGTGCCCGTCGAGGGGAAGTGGGGACTGGAGATTTACCCCTTCCATCCTCCTGGCTGGACACCCGCATGCAGTGAGCCACCTGCAGACTGGAACACTTCAGCCCTGCACTCAAGAGTCAGCAGGTGCGCAGTGACCGAAAGCAGAAACAACCCCGTGCCCATCAACAGATGAAGGACACCAAGATTCAGTCCATCCGCACGAGGAAGTGCTATTCAACCCTAAAGAAGAATGAAGGGCCGGCTCAGGCTGCCTCGTGGACGAACCTTGAAAACACGATGCTGAGCAAAGGAAGCCAGACACCATATTGG EMBV3_01555 ATCTATCATGGAACGATATGGATTTTAGGGAGCAGACTTTGTTTTCTTTTACATATATAT Gene GeneID:615690|FAM3C:NM_001099147:70_cdna Constitutive 2 NULL GeneID:615690 4 GENE FAM3C MGC142886 family with sequence similarity 3, member C EMBV3_13580 TCTCACAGCTGGGGAGCAGGGGGAAGTTTGTGGATTCCTCTGCCAGTCTGCAATGGGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37517 GCCTCAGCACTATTGGCATTTTGGCCCAGATATTTCTTGTTGTGAGGGGCTGTTCTGTGC Gene BVT0102_004305 + 0 NULL GK000009.2:53539405-53673440 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237387 TCONS_00237386 1 XLOC_144702 NonCoding TCONS_00237387 XLOC_144702 NonCoding NonCoding - 9:53635932-53641521 - TSS177479 2623 1 TCONS_00237387_2 114 0.518490278307282 3 0.531138153185397 0.00473085029374868 0.0034421470952292 0.00674477132381236 0.00606639105137176 0.00367559930276124 0.00163157876672407 0.00497801419405328 0.00394517291717725 0.00378263448814242 0.000977378077464962 0.000185018912326542 0.000243711639738912 0.000570258368010614 0.00191620819233772 0.00108665784809984 0 0 0 0.0177319852992451 0.0136978867454774 0.00318561237132022 0 0 0 0.00789378276574121 0.00593049670907832 0.00381980588741373 5.85897193033985e-05 2.92009972802513e-05 9.24347094001293e-11 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 8e-121 439 95.29 0.104841784216546 0 noncoding 1 1 1 1 -0.165469390008008 0.397579972894823 0.043244568172613 0.507398543299978 CTTTCCTCAGCTTGAGTGAAAAAGAAAAACCTGGGGAAGGCCTATTGTTTGGCTCACCTGAGTTATAGGCCCACCCCTCGAGGTCAAGGCAGCCGGATCTGTTACCAGAAGGAGGATTGGGCCGGAAAGAGTGTGGTAACAGAAAACAATAGCTATGACAGAGAGACTGTTTCTTGTTCAGTGTCTCAGATGATCATTACATTCTCTAAAGAGGAGGCAAGTCTGCTTTTAATGTTGAAAGAATCCTATCATCCTAAGGAGAGGCAAAGAGGAGGAGCATGTTTAGCTTAAAAATACCAGAGGTGATTTTTGAGAATGGAAGAGCTACTGTTCCTCAGATTGTCCTGTAGGCCAGCTTTCTGAGACTCAGGTCTTTCTGCCTCAGCACTATTGGCATTTTGGCCCAGATATTTCTTGTTGTGAGGGGCTGTTCTGTGCACTGCAGAGTATTTGGTAGCATCCCTAGCTCCATCCTCTAGATGCCAGTAGCATCCTCCTTCTGCAGTCATGAAAAACACTAACATCTCCAGACATTATGCCTCTGGAAGGCAAGATTGCCTTTGTTCTGGAAGAAAGGAGGTGTTAAGGAAAAACAAAGTCAGTAAAAGGACAAGAGTTGATGTCCAAGGCATGAGTGGAAGCCGCATGTACTGTGTCTGCAGCAAAAAGGCTGCCTCTTCTGTTACCAAAGATACGCCGGGTTACTCTTCACTTTTAAAAGAATGTATATCACCGAAAAGAATTTTGGAGGCTTCCCTGGTGGTCCAGTGGCTGAGACTTCACACTCCCAATGCAGGGGGCCCAGAGGTAAGTCCTGGAGGAGGTCATGGAGAGGACGTAACCACTGGTTGACTCACGAGATGGACTCAGGCAATTGAAGGCTCCTCATCGCCTCCCTCATTCTTGGAATGCATATTCTGCCCATCTTTCCTACACTGGGAGCTGTTCCAAGAACATAGCCTTGAAAGAATAAAGCATTGTTGAGATTGTCTGAATGACGTGTGTGATGGAAGCCCATTAAGGCCTCTCTATAAACTTTGAAGGTTCTGGAGGGCAGGTGTAGAGATCTACTCCTGTGTAAGTTCCCTTGTTTATTAAACCAGCCACCTCCCAATCTGGAGTGGTCTGCCTCTTTTTGCAGTCTCTCCTTGCCCTCCATGTATGAGGGGAGTTTGCAAACCAACAGTAACCCCAGGATACATTCCTACAAGTAGAATTGCTCTAACAAGAGGAATGTGCATTAAAAAAATGTAAATACAGGCAAGTTGTCATCCAAAGTGTTTGTATCCATGTGCATTCACGTTCTTATTTACCCATTTTCTAACACTGGATATTATAATCTTTTTACATCTTTGTTAATCCGATACATGGAAAAAATTCAATTTATTTTAGAAGTTGCCTCCCCTAATGATGACTAAGAACCCCTTTTGTATTTTGTTTGTACTTATTTAGTAGAGCACTTAGAATATTCTGTCTTGTGGGCAAGGACTATTTTGTGTTCAGAACAGTAAATATTTTCTAAGCATCCATTATGTGTCTACTTGATTATACTGAATTAGGCTAAAAACAACATAAATAACAGTGTTTGGTACCAGATAATGTGGCAGAGAATATAAATATCAAAAATATTAATGGTAAAAGATTTTCCCATGGTATTATTAGTTTTGAGTGACACTAGCTCCCAATACGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGCAAATCCCATGGACGGAGGAGGCTGGTGGGCTGCAGTCCATGGAGTCGCTAAGAGCCGGACATGACTGAGCGACTTCACTTTCACTTTTCACTTTCAGGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTACCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCTGTCTATGGGGTCGCACAGAGTCAGACACAACTGAAGCGACTTAGCAGCAGCAGCAGCTCCCAATAAGTAGAATGAATTAGCTACAAAATGTACCCAAAAGGTAACTGAATAAATTGAGGTGTTTTGTTAAGCTAGTTATTTTGTATTTTCCACTTGAGAACTACAGAGTATCAGCCAAGAAAAAATCAATTTTGGTTTAGGCATAATTTATAATGATCTGTTTCCCTTGGAAGAATAATTAGAAATTTGGCTCAGCAACTCCTTCATGTCACTACTGGCTTATGACAGAAAACCATGACAGAGGCATTAAGAATGACACTGAGCTCCTCATTCGCTATGGGACAAGGCAACCATGACAGGTGTTTGTTCTGGAGTGGAAACTTATGTCTTATATCACTAGACTGAAACAGGGAAAACATCTAATTATTGACAGTTGAAGCCCTACACTGATCATTCTGTGAAATACATTTTAAGAGCTCAAAATTTTTTTTTGCATAGCTTTTGTGAAGCATTGTTTTAAACTATTTTCTTAACAAAGAGAACTACCATATGTTCAGTTCAGTTCAGTCCAGTTCAGTTGCTCAATCATGTCCAACTCTTTGTGACCCCATGAACCTCAGCACACCAGGCCTCCCTGTCCATCACCAACTTCCAGAGTCCACCCAAACTCATGTCCATTGAGTTGGTGATGCCATCCAACTATCTCATCCTCTGTCG TCONS_00237368 TCONS_00237369 TCONS_00237370 TCONS_00237371 TCONS_00237374 TCONS_00237376 TCONS_00237379 TCONS_00237380 TCONS_00237381 TCONS_00237382 TCONS_00237383 s 5' 2152 TCONS_00237368 TCONS_00237369 TCONS_00237370 TCONS_00237371 TCONS_00237374 TCONS_00237376 TCONS_00237379 TCONS_00237380 TCONS_00237381 TCONS_00237382 TCONS_00237383 s 5' 3969 EMBV3_01575 CTGTGGCCTGGGTCCTACATAGTACAAGCAGTATCACTGGAGAAAATCCATAAACTCCTC Gene GeneID:539063|CHST4:NM_001076145:372_cdna Constitutive 0 NULL GeneID:539063 18 GENE CHST4 MGC139154 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 EMBV3_42536 GAAGTGTTGAATGGGTACCTTCACAGTAAATCTGGGGTTAGGGAAGAGATCCTGAGAGAG Gene GeneID:539119|ZNF397OS:XM_002697678:171_cdna Constitutive 0 NULL GeneID:539119 24 GENE ZNF397OS ZNF165 zinc finger protein 397 opposite strand EMBV3_10064 CTCCGTCCAAAATCTCTGCGTAGTCCAACAGAGGACAAGGTTCTTGCTGTCTTCTACACC Gene GeneID:787963|LOC787963:XM_002707829:25_cdna Constitutive 0 NULL GeneID:787963 7 GENE LOC787963 NULL similar to Olfactory receptor 2L2 (HTPCRH07) EMBV3_01625 TTTGCAGCTTCTAGAGATAAGAGACCGTGTAAATAAACTCTCCCCACCCGGTCAGCGTCG Gene GeneID:531710|FAM5C:NM_001102140:14_cdna Constitutive 0 NULL GeneID:531710 16 GENE FAM5C MGC165982 family with sequence similarity 5, member C EMBV3_16856 ATCGCACCCTGATTCTGCTGACTTGCTGTCTGCCCTGAGCCAGGAGGAGCAAGACCTCAT Gene GeneID:783141|LOC783141:XM_002690466:369_cdna Constitutive 0 NULL GeneID:783141 10 GENE LOC783141 NULL similar to rCG58239 EMBV3_27050 TGCAGGAATGGCTTGAGACAAAAGGAAGCCCCAAATCACACATCGACAGAGCAAGCTTCC Gene GeneID:507844|ACYP1:NM_001045982:64_cdna Constitutive 0 NULL GeneID:507844 10 GENE ACYP1 MGC140614 acylphosphatase 1, erythrocyte (common) type EMBV3_09133 CAGACTTTGCATTTTTGCAGTGTCTTTCTCAGACATAATGGTAGAATTCATCTGTGCAGC Gene BVT0102_040399 + 0 NULL GK000014.2:63328222-63411642 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02383 GGGTATCATCCCAGTGCTTCCTTTTATCTTCAGCTCACAAGCAGTGCAACCTCGGACAAT Gene BVT0102_150663 + 0 NULL GK000013.2:63490257-63550490 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15057 TTTTCCATTCTGTTTCTTTTTACTGACAAGCCTAGACTTAGAGATCCACATAAATAAGTC Gene GeneID:511023|STAT2:XM_002687578:636_cdna Constitutive 0 NULL GeneID:511023 5 GENE STAT2 NULL signal transducer and activator of transcription 2, 113kDa EMBV3_27663 TTCGATAAGGCCAAGCTGAAGAAGACTGAGTCGCAGGAGAAGAAGACCCTGCCGACCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41274 CTAATAACCAGCTGCAGTTCCTACCTCCAGCTGTGGTGCTCCCATTCAAGTTTCTGAGGT Variant GeneID:532910|LRRC28:NM_001038156:44_cdna 471^780 4 EMBV3_39781 GeneID:532910 21 GENE LRRC28 MGC134389 leucine rich repeat containing 28 EMBV3_40380 ACACAAAGACCAAACTGCTGGACGTCTTTCTTTTCCTTTTTTTTTCTAAAATGTGCAGGA Gene GeneID:613713|NKX2-1:XM_002696708:103_cdna Constitutive 2 NULL GeneID:613713 21 GENE NKX2-1 NULL NK2 homeobox 1 EMBV3_01535 GGTATGTGCCCCGACAAGTCCCAGTTGGATCTGCTTCTACCCAGCATGTGTTTGGATCAA Gene GeneID:282238|GABRA4:NM_174543:8_cdna Constitutive 1 NULL GeneID:282238 6 GENE GABRA4 MGC139557 gamma-aminobutyric acid (GABA) A receptor, alpha 4 EMBV3_03865 TGTGATCAAGAACCTGCAAAGCCTGGACCCCAGCCACAGGATAAGTGACCGGGACTACAT Gene GeneID:617510|CCK:NM_001046603:229_cdna Constitutive 0 NULL GeneID:617510 22 GENE CCK MGC140193 cholecystokinin EMBV3_21883 TCTTAACATTCCCACCGAACCTGCCAGGTTTCCACTGCCTTTCTTGGGGGTGTAGCTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08067 CTGGGGTCGGGTGGGGGCACAGACTGAACTTTCCTCAAACATGATGGTCCTCAATGACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26104 CTTGGCCATTCTGCTGCCCCTGGGCTTGGTCATCATCCTTGGGAGTGGTGTTTACATATA Gene GeneID:505735|SEZ6L2:NM_001045927:251_cdna Constitutive 1 NULL GeneID:505735 25 GENE SEZ6L2 MGC137627 seizure related 6 homolog (mouse)-like 2 EMBV3_31682 GTCATAATGTCCATCCGCACCAAGCTGCAGAACAAGGAACATGTGATTGAAGCCCTCCGC Gene GeneID:615595|LOC615595:XM_002692238:1498_cdna Constitutive 0 NULL GeneID:615595 13 GENE LOC615595 NULL similar to ribosomal protein L10 EMBV3_01675 TGATGCTTTTGGCTTCTGTGGGTCAGGGATTCAGATAGGGCATAGAGTGGTTTGGGTCTG Gene BVT0102_147439 + 0 NULL GK000013.2:20059591-20143636 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25260 TGAGTAAGTGTACTTAGAAGAGTTTGGCTCAGTACTGGGAAAAAATTAGCCCTAGACCAA Gene BVV0102_188657 - 1 EMBV3_14425 GK000005.2:57074073-57086324 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43104 GTGCTGTGTCCAGTAGGCTTTGGATTGTCGTGTTCTCGTTTTCTTTTGTCTCTAGGTATT Gene BVV0101_023443 + 0 NULL GK000020.2:42015809-42044890 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03417 CAGGAAGGAGCAGAAGAGCTGCAGAAAATGCTTCAGGAAGATGAGTTGCGAGATGCAGTG Gene GeneID:614581|LOC614581:XR_083846:107_cdna Constitutive 0 NULL GeneID:614581 14 PSEUDO LOC614581 NULL similar to ADP-ribosylation factor 4 EMBV3_28503 CAGGACATCTCTGCTTGAGGCTATGTGCCTTGGACCCACGTTCTGATGTGACCAATCTCA Gene GeneID:533208|COQ5:NM_001075984:231_cdna Constitutive 0 NULL GeneID:533208 17 GENE COQ5 MGC142779 coenzyme Q5 homolog, methyltransferase (S. cerevisiae) EMBV3_30475 TGTACATCGCGAACCAAGCGGTCACCAACACAAGTGAACGCCCTTGCTGGGAGTCAAACA Gene BVT0102_099342 + 1 EMBV3_28414 GK000013.2:17885918-17906391 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165832 TCONS_00044598 2 XLOC_100672 XLOC_026238 Coding TCONS_00044598 XLOC_026238 Coding Coding - 13:17899985-17902291 - TSS32756 2306 5 TCONS_00044598_4 70 0.220728534258456 1 0 0 4.35751925265147e-06 0 3.60110648823374e-06 0 1.78387663600978e-05 0 0 1.71078344095372e-06 2.97375927245841e-06 0 0 2.48853578238157e-06 0 0 0.00105217924295168 5.45968773048705e-05 0.000284520271510951 0 0 6.58224331206648e-07 0.000720399146772288 0.000189634129003763 0.000429905618370324 0 0 0 4.16529758810153e-06 2.56133732531568e-05 1.79217634277741e-17 XM_005199721.1 LOC101908720 PREDICTED: Bos taurus ankyrin repeat domain-containing protein 26-like (LOC101908720), transcript variant X2, mRNA. 0.0 1229 95.96 0.332176929748482 TCONS_00044598_5 sp|Q811D2|ANR26_MOUSE ANR26_MOUSE Ankyrin repeat domain-containing protein 26; 1e-09 55.1 66.67 0.603448275862069 1 noncoding 0 0 0 0 0.0360263632782069 0.772349958095213 0.0371786092547407 0.527363320614433 GTTCTAAACTCTTTGCATGAATCTCATTTAAGCATCGCAGTGCTGTCCTGTGAGAGAACTACTTCTCTCTCTCCATTTTGTTGATGAGGAAATTGACGCACAGAGAGGCTGAGCGACAGCTGACAGAGTGAAAGTCAAATTCAAATCCAAGTTGAGCTGAATCTCAAGGTCATGGTCATTCTATTCAAGTAAATTGTTCTTTCATTACTGTGTTAAGCAGAGCTAATGCTAATATATAATGTTCTTTCTCCAGAAGGAAACGAAATATTTGTTTTAGAGCAATAGGAATATCACGCTATTGAATGTCTTCAGTCACAGGAACAATTGTTTATTTTGAAACAGTAACACTACAGTTTACTGAAAACTCCTCTTGCTTTCATAGGACTGCATTCCACTTGGCATGTGCCAATGGCCATTCAGCGGTGGTCACTCTGCTCCTGGAGAGAAAAATGCCTGCTTAACCTCCGTGACAATGAAAACAGGACCGCACTGATGAAGGTAGATGGGGCAGCGAACCGTGTCCACACGAGGTGGATGTGATCTAACTACTGAGACAAAAGTGAATTCATCTCATTTAGATATAGCAAACTGGTGAAGCCTGTGGCCTGTTTACTTTGAATTCCTAGAATTTACACTCTGTTTCTTGGCACAACACTAACAGGCCATAGAATGCCAAGAAGAGGAGTGTGTGACTCTTCTGCTGGAGCATGGTGCCGACCCAAATGTCATGGACGTCTCTGGGAACACCGCCCTCCACTATGCTGTCTTTTGCCAGAATATATCACTCACAGCAAAGCTGCTTTCCTGCGACACCAATATAGAAGCCAGGAACAAGGTATATCTCAACTATATTTACAAAATATTTGCGAAGCATTTTTTTAAACAAGAAGTGTTTTATTTCTAACTATGTAAATAGGTAAACTGAATAGTGTCCATCAAGCCCTGTTACCATGGAAACAACTCCAAAACCAATGCAGGGGGTGGGGGAAAATGTTGGAGCCCACAGAGAGGGCAAAGCTCTGTCTCCCAGCCAGCCGTCTACCCCAGAAGGAAGATTTCCCATCAGGACGTGCCCAGGAGTGGGTGGTAGGCTCAGAGCCCACAAATGATGAAGGCCTGGGAGGAGTGAAGTGATGTGAGGAGTGGCTGCTTCCACAGGCTCAGGGAATGGGTGCCCCTGGGGGTGGGTGGGAGGAGGAACCAGTGCCCATGAGGGGAGCCGGTTGAGTGCAAGTGGGCCTGGAGGCAGCAGGCCTGGAGCCCTGAGCCCTCCAGGACCCTGGTTCTGAGATCCGGCCAAGAGGGTCAGGTCATGTTTGACTCCCAGCAAGGGCGTTCACTTGTGTTGGTGACCGCTTGGTTCGCGATATACACCTTGGGGTCTCCCGCGCTCAGCCCCGGGCTGCTGCTCGGTGGGGTTGCAGCTGTGCGTGTGGAGCTGGTAATGGCGAAAACTTGCCTGAAATCACAACAGTTGTAGGTGATACAACTTAGGCCTTCTGACTCCTCAAGTCCAGAGTTCTCTCTATGGAAGGTAATATTCTCAGGACTTCCCTGGTGGTCCAGTGGTTAAGACTCCATGCTTGCTTCCACTACAGGGGATGCAGGTTTGATCCCTGGTCAGGGAACTAAAATCCCACACACTGTGTGGCCAAAAAAAAAAAAAAAAAGATAATATTCTCCCTTCCAAATCCAACAGAAAGATTCAAAGCAGCTTCTAAAACCCTCAGGTTTAAACTCTCTGTCCCTTTTTTAGAAACCACTGTGGAACATCATAACCAAAGCTCCAACTTCCAGTACTTAGAAAACGTAAGTGTAAGGAGAGCGGAAGTGTTAATCCTTCAGTCGTGTCTGACTCATTGCCACCCCAAGGACTGGAGCCCACCAGGCTCTTCTGTCCATGGAATTCTTCAAGCAAAAATACTGGAGTGTGTAGCCATGCCCTCTTCCAGGGGATCCTCCTGACCCAGGGATCGAACCTGCATCTCCTGCATTACAGGCAGATTCTCGACTGTCTGAGCCACCAGGGATGCCCATCAGGAAAGTGTAAACATGACATCACTAGATACTATACACTCAAAATGGAAAAAGCTCTAAATATTTTTGAATTCATTGGAAGTTTGAGCTGTATGAGAAGCAAATGTGCTAGCTCCTCCAAGGACTTGCTCTCAATGTAGAGCCAAGTCCCTCTTTCCCTACAAACCCAAAGGCCTATTCTCACAGGTCCCCAGTTAGGGTCTCTGATGCCTACAAATACCTGCTCCTCTCGTGGAACAGCAACCACTTACTACAGCAAGCAAGGATGG TCONS_00044599 TCONS_00044600 TCONS_00044601 TCONS_00044602 TCONS_00044603 TCONS_00044604 TCONS_00044605 TCONS_00044606 TCONS_00044607 TCONS_00044608 TCONS_00044609 TCONS_00044610 TCONS_00044611 TCONS_00044612 TCONS_00044613 TCONS_00044614 TCONS_00044615 TCONS_00044616 s 3' 3839 TCONS_00044599 TCONS_00044600 TCONS_00044601 TCONS_00044602 TCONS_00044603 TCONS_00044604 TCONS_00044605 TCONS_00044606 TCONS_00044607 TCONS_00044608 TCONS_00044609 TCONS_00044610 TCONS_00044611 TCONS_00044612 TCONS_00044613 TCONS_00044614 TCONS_00044615 TCONS_00044616 s 3' 3839 EMBV3_32457 AGATTCTACAAGCTGCACGAGCGGAAGTGTGAACCCATTGCCATGACGGTGCCTAGAAAG Gene GeneID:282196|CORO1A:NM_174521:215_cdna Constitutive 0 NULL GeneID:282196 25 GENE CORO1A NULL coronin, actin binding protein, 1A EMBV3_43485 TTTGAATCAACTGATGAGACAACTGCAGAGGAAAGACAAAGATGTGCTGGAAGATAAATT Variant GeneID:526153|BRD7:NM_001103260:309_cdna 451^891 1 EMBV3_25354 GeneID:526153 18 GENE BRD7 MGC165911 bromodomain containing 7 EMBV3_25340 CGGCGGTGGTGGCAGCGGAGAAGACTGCCAAGGTGGATTAGACAGCCGATCGATTTATAA Gene GeneID:534917|KIAA0406:NM_001076042:1216_cdna Constitutive 0 NULL GeneID:534917 13 GENE KIAA0406 NULL hypothetical protein LOC534917 EMBV3_16537 AGTGACAAAAATTTTATTCCAGAATTGAAGAAACTAACGGCAAATCCCCAAACTCCAGCC Variant GeneID:516874|TFB2M:NM_001038127:44_cdna 558^860 1 EMBV3_27908 GeneID:516874 16 GENE TFB2M MGC133999 transcription factor B2, mitochondrial EMBV3_42063 GATGGATTTCCCCAAAGACAAGGACTTGGTACACTTATAGACTGGAATTGGCATCCAGGC Gene BVT0101_057587 + 0 NULL GK000022.2:21969869-21994944 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126474 TCONS_00126475 1 XLOC_077441 Coding TCONS_00126474 XLOC_077441 NonCoding Coding - 22:21970154-21971557 - TSS94839 1098 2 TCONS_00126474_1 44 0.046448087431694 2 0.218259629101284 2.59034416103158e-08 0.000331213181061648 1.08590818313379e-10 3.13630282519391e-06 2.97979219411744e-05 6.63150226301935e-11 0.000273171327088785 0.000743379158308974 0.000100602095447798 3.74687817896778e-06 0 3.52920233362492e-11 0 0 0 0 0 0 0.000548818148856544 0.00182910442074221 5.72391466884326e-09 0 0 0 0.00067506557792397 0.000150139861861706 6.18483789222361e-11 0 0 0 0 noncoding 0 0 0 0 -0.159083882882205 0.269803600868731 -0.0263512753830133 0.724843116824686 GGGCGTCCTGCGAGGAGTCCGGGCTTCAAACCCGGCTCTGCGCCGAGAACTCGCTGACTTAGGAACCCGCGACTCAAAACCACCCGTTGGGGGCGCCCCCAGCCCTTGGGGACTCTCCTCCGTCGGCTGCCCCATTTCTCTAGAATCCAGGAGGTAAAGAAACGCAAGCGTCTCCGTGCATATATAAAGGAGCCAGGTTGTGACTTGCCAGCGCTGAGATTGAGAGGCAGAAAATAAATACGAATCACGACCTCGGTCCTGACCCTGCTACAAGCAGCCCCTCTCCTCCCGGGAGCTGTAAATGCTTAAGTAAATAAACCGCAAACCAGAAAAATAAGGGCTTTGGAGCGAGCCGGTCACAAGAAGATGCGCGTCTAGGCGGGGCGCCCTCCAGCAGGTCCTACAGGGGCTTCCGGGGACACAAAGTGGATTCAGCTCACTGCTAAGTGATGCCTGGACATCCCGGGCTATCTGCTCAGGCTCCCGCTTTGGGAAGGTGGGCAAGTCGAGCCTCAGATGTGCGTTCATTCTCCAGACATTTCCTGAGAGTGTACTGGGTGCCAGGCACTGGGGCATGGTGTTGAGTGTTCCACGGTGTTCCGGATAGGCACTGCCTACCGCCGCAAAGGATCTGCTACAACAGCAACAACAGCAATAATAATAATTGAGGAGTTAGACTTTTTTGAGCCCAGCCCACATGCACTTTTCATGAGTTTTAACAACCCTTGACTTATTTATTGTCCCTATTTGACAGATGCACAACTGAGAGCACAAAGAAATCAGATAAATTCTCAAGATGACACCATCAGTTAAGTAGTGCAGCCTGGATGCCAATTCCAGTCTATAAGTGTACCAAGTCCTTGTCTTTGGGGAAATCCATCAGCACTACTTTAAATGGCCTCCCTCCCCATTTTGGGAGCAGACTCTGAGCCCTTGGGCAAGTCATTTTTTATCTCTTTGCCCTAGTATTGCCATCGGAGAGGGAGAAAAATCATTAGAATTTGCCAACCTTCTGTCAGGAGTGCTTGATACAGAGTCCACAGTCTTGTGGACTTCAGGAACAAATTAGGGGAGCACCATAGCTAATAATTATTACTG TCONS_00128325 TCONS_00128338 r 5' 63 TCONS_00128325 TCONS_00128338 r 5' 63 EMBV3_19763 TGTCATCAGCTTGTAGCCAACTGGAAGGGGCGGAGTGAAGAGAGACACAAAGCAGCAGCT Gene BVT0102_022735 - 1 EMBV3_06661 GK000008.2:38927500-38931040 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225005 TCONS_00225006 1 XLOC_137672 Coding TCONS_00225006 XLOC_137672 Coding Coding KIAA2026 8:38929764-39039556 j TSS168576 6872 1 TCONS_00225006_7 1859 8 0.937481214307184 9.37770833702257e-05 1.6798398405939e-45 7.99164418445962e-71 1.76210754799912e-29 4.01152655020924e-71 6.0470721499307e-05 1.28527555746247e-35 1.35749907217624e-124 7.79981291626507e-05 1.6534351384169e-61 5.53374143065922e-06 5.20496912981998e-82 1.45258120572945e-10 2.27522798706952e-05 9.88881406303012e-07 2.97662880017773e-41 7.51729983375459e-45 1.29990610221297e-27 3.96132839626619e-28 2.66272980542837e-33 2.42987918667236e-77 5.55427920669524e-31 1.83736684068318e-51 4.15842933800437e-28 0.00020115743085893 1.52132493279208e-40 1.94358732594196e-59 5.31211378221475e-42 3.52726723669916e-05 7.08024296294776e-05 XM_869083.5 KIAA2026 PREDICTED: Bos taurus KIAA2026 ortholog (KIAA2026), transcript 0.0 1.151e+04 100.00 0.92884167636787 NM_001017969.2 KIAA2026 Homo sapiens KIAA2026 (KIAA2026), mRNA. 0.0 8792 90.36 0.92884167636787 TCONS_00225006_7 sp|Q5HYC2|K2026_HUMAN K2026_HUMAN Uncharacterized protein KIAA2026; 0.0 3132 86.80 0.999462076385153 0 coding 0 0 0 0 -0.0973396560385942 0.447231121325586 -0.0168921434157546 0.779946907564826 TACATCATCTCTTTTTCTTTTGCATGTGAACATATGTTCCAATTGGTCGAGTCCTTGAACCTTTCTAAACTTCACAAATTCCAATTCTACGTTGAAAAACCAGCAGTCACGGGGATGGAGGGTGTTGAGTGTGCAAAGGAAAATTTTTTACAATAGGATAGGATTTACATTCTATGTCTACTTACACTTATGTCTACTTTCACTTTCCATCAACGAAAGTTGTCTAGCAAGCGCCTGCAGGATTAATTTTAGCTTTTATCGCTAAGAGGGGTCTAGCGGAACAAATATCTTCTTAGCACAGCCCACTTCTAAAACCCTTTCAGCCTCCCACTCAGGAGGTGGCGAGCAAAGCCCAGCTGCTGCTTTGCGTCTCTCTTCACTCCGCCCCTTCCAGTTGGCTACAAGCTGATGACATCATTGCTCCGCGCAACCTACCAGGCCTCAGGGCCTGAAGCTGAGACGAAGTCCCGGCTTTCACGTAGCGGCACTTGAGAGAAAAGACAACGATAGCAGTTACATCTAGAGGCTATTATGGATTGGAGGATGAGAAGGGAACTGCATGTACTTCAACAAGGCGTCGGTCAACACCACGAAGTTTGGCAGGCTTGACAAGTGGAGTTTTTGAATCTGTAATGGTTCAAGTTTTGAGACAGGAAGAACAGCTGAGAGCAAAAGAAGAAAAAAGGCTTCGGGAGCAGGAAAGAAAAGAAGCAGAAGAAGCTAGTCAAAAGGAAATAGAAGAATGGGAAAGAAAACTTCTAGCTCAAGCAGCTCCAACTTGTATGGAGACCATGTGGGAAATTCCAGCTATTGGGCATTTCCTTTGTTTGGCCCAGCAAATTTTAAATTTGCCAGAAATAGTCTTTTACGAATTGGAACGTTGTCTTCTGATGCCTCAATGTAATGCTTTTCTATCTAAAATAATGACTTCTCTATTAAGTCCTCCCCATCGCAGACCTACCTTACATCGAAGACCTACTTTGCCTTATAGGACCTGGGAAGCAGCACTGAGACAGAAAGTGCAGCAGTGGTACACGGCTGTAGGGCAGACAGAAAATCCTGACAACTGTGCTGAAAAACTTGGGTTGTGTCCTCAGTTTTTTAAAGTTCTTGGAGAAGTTAATCCATTGGAAGAAAAACCTTTTCATGAGCTACCTTTCTACCAAAAAGTATGGATACTTAAGGGTCTTTGTGACTTTGTGTATGAAACACAAAAGGAAGTTCAAGATGCTGTACTTGGTCAACCTATTCATGAATGCAGGGAAGTTATTCTTGGTTATGATTATTTGGAGAATGCTTATGTACATTTTCCACAGTTCTGTGGTGCAGATGTACGGATTTACAAACAAAGACCTTTTCAGGCCCCAGAATTTCCAATTCCACCCATTAAAATACAAAGAGTACCTCGGATTAAACTGGAGAAATTGAAGTGTGACTATGTTAGTGCAAGTAATGGAGAGCATAGGTGTAGTAGAGAAGGCCTGCCCTCTGCCTTCAGGAAAGAGCAGGAAATTAATTTTGATCCAACCTGCTGCCCTGCTAAAATGAACTTAGATAATCATGACATCTCTGTTGAAACGGAAGTGAACTCTAACTGTGAAATTAGAATTCGCAGGCCCTGTGAAATGAATATAACTGATTGTTGTAAAGAAAATTTAGAGAAACCAGGAAGTCCAGGGGAGGTTACTAGCTTTGGAGAGCCTCTCAGTCCAGGTGAAATAAGGTTTATAGAAAATCAGGAAAAATATGGTGAAGCTTCCAGAGTAAAGCCTGAACCCAGTCCGTTAAAAGAAAATGCTCTGAAATCTTGCCAGATACATGTAAATGGAAGCCACAGTGATCATCCAGACATTAACTGCCACAAAGTTGTAAGGGATATTCTATTAGAACAGTCACTGCAGAGCCACAAGAAACTCAAACTAACTAAAATGAGGGCAAAAAAGAAGAAAAAGAAAAAAAAGAAATTGAAAGATATTTTGAATGAAAACTTACAGAGAAAGCGTGAAAGTCTTCATTCCCTTGCATTCAAGTCTTACAAACCTGAGATCCAGAATAAGTTACTGATCATCAAAAAGAAAGCAAAACACAAGAAGCACAAATCTGGAAAAAAATCCATATCTAAAAAAGCAATCACAAAGAAGAGGAAAACTGTCACAAAGTCACCTACTGTACCAGAATTTCAGCTTATTTGCACTAATCTTGATGAACTCAGGGAATTAATCACAAAAATCGAGAATGAACTCAAAGATCTGGAAAACAATAGAAAAAAATCGGGCAAATGGTATCATCGGAGGCAAGCTGTAAAAGAATTGCATAGTACATTGATACGTCTTTTAAACGAATTGCTGCCATGGGAACCAAAGTTAATGAAAGCTTTTCAAAGAAACAGGAGTCGCCTAAAGAAAGACTACGATGATTTTAGAAGACAGCCTGATCATGATAAATTTGCTAGAGAACTGTGGACTAGTGAAGAAGGTGAAGGAGATCCTGGAAGAGAAACCCCTAAAGTAGAAATCAGTAGCAAGTCTGTAGACACCACAGAACCTCTAGATATCCTGGAGAAGGATCATTTTGATTTAGATGATATGAAATTGTCAGAAATAGATTTTCCTATGGCCAGAAGTAAGTTGTTGAAAAAGGAATTGCCTTCTAAAGATGTACTGAAGACACTGCCTAAAACACTTAAACGACAGTCCAAGCAAATTAGTTACCTGGATGATAGCACAAAAGAGCTTTCCCCAAGGAAGAAAGCAAAGTTAAGCACAAATGAGACAGTGGTTGAGAATGCAGAAGGTGATGTGCAGATGGACTGTTTGAATGAATCAAAGCATACAGAGCCACTGTGTCCAGAGTCGTTTGCCTCATTGGATTCAACACCAGTGTCTACTCTCCAGAAAGGGACCAAACCTATTCAGGCCTTGCTTGCAAAGAATATTGGGAACAAAGTGACCTTAACAAATCAACTGCCCCCTTCCACAGGTAGAAGTGCCCCTGCTGTGGAAAAGCCAGTTATATCTCCTCCAGAAGCAAGCCCCATAAAGCCAGCATTGACCTGCCACACCAGTACAAAAGGTCCTTTACAGATGGTATACAAAATGCCCTGTGGTCAGTGGTTGCCCTTAGATCTTCATAACAGCTCTGTAAAGATTCAGATGCAACCTATGCTAGATCCTAAATCAGGAGAAAAAATTATGCAACAGGTTCTCATTCTGCCTAAGAATTTTGTGATTCAGCACAAGGAAGGGAAAGCAGTTGCAAAAGAAATACCACCACTTCAACAAAAAGGTACAGAACAACATGGTTCATCTTTCCCACAGACAGCAAATGTAAACTCTTCTTTACCATCAGTTCTTGTCAACCCAACAGGAACTGTTTCTACCCAACTACCTAATACAGCTTTCAACAAGACAGTTACCCCTTTGTCAAATGTGAGTAGTGCTAGACCACAGTCTTTGACATCTGTAACCTCCATAAGTAATTTGTTAGCACCACCAGTTAAGACTAGCCAGAGTGAGGCAGGAAAATTCAAGAACACAGTTTCAGCCACCGCGTTCCCACAGCCCATTGCTTCACCCACCATTTCCTCAACAGTTCAGCCTCAGTTATCAGCAACAACACTAAATGGATCTACAAATTCCAGTAGTTCCCTCAACTGTTTTGCACAACAGACTGCTGATTCTTCTGAAGCAAAGCAAGAACTGAAAACTGTGTGTATAAGAGATTCACAGTCAATTCTTGTTAGGACACGAGGTGGAAACACTGGAGTTGTAAAAGTACAGACCAATCCAGATCAGAATTCACCCAACAGTTTATCTTCAAGTTCAGTTTTCACTATTGCTCCTCAGCTTCAGGCATTTCTGGTACCAAAATCAACAGCTTCATCATCATCTGCTTTTTCGTCAGTAGCTGGAACAACTGCTACATCTAGTCTCCCATCTTTTGGCCAAGCACTTACTTCTGTTTCCATTCCAGCTGGCTTTAATCCATCCACAGGCAAAAATCTTAAATTTACATTAAGCCAACCTTCCTGCAGTGGTAATTTGGGCCATATGATAGATAAAACTTCACCCATGCCCTCCTCTCCCTTAAAGTCCTCTGTTTCTTCTAGCCCTCTATTATCAACAGCAAATAGTTCGGTAAGTGTAATTAACGTATCAACAGGAAATTGTGGACAAACCAGTTCAAATGTTATTCGTACACCAGCTAAACATCAACAAGTAGATTATGTCACAAAAAGTTACCCTGTTACAAGATCAGAAGCAACAGCAAATGGAGATACTATCAGTGGGACTCCAGTGCAGAAACTTATGCTGGTGTCAGCTCCATCTGTTCTTTCTTCTGGCAGTGGAACTTCGATTAATGTGGCACCTGCACCAACATCTCCAGGTGTTTCTGCCCAGAAATTAGTTTTTATAAATGCTGCAATTCCCAGTGGCACTTCAACCCCAACTATTGTAGCAGAACCATTAAAACAAGCTCTTCCTTCTCCATTGAGTAAAACATATGTTAAGCCTCCAGAGCAGCCCCAGATAGTACTAATTCCATCTACAGTGGGAACACCAATAAAAATAAATTCATCGCCAACTGTGTCTCAGATAAAAGATGTGAAAATTGGGCTAAACATAGGCCAAGCAATTGTTAATACTTCAGGCAGTGTGCCAGCTCTACCGTCAATTAACATATTGCAAAATGTAACCTCAAAAGGAGAAGAGAAAAGTAGCAAGGGCTATGTTTTACCATTGTCAACAAGTGGCAGTTCAATTCCAGTAAGCTCAAATTTTATGAGTCAAAATATTACTCCTGTTAATGAATCAGTGGTTTCTGCTTCAAGAACAGTAAACATGTTTTCAGGAACAGGAGCAAATGTATCTTTGGGTTCTGTTTCAGTGACCTCAACCCCTGCCTCAGTTGGGACACGACCTCCTGTTTTAGTCAGTGGAAATGATACCTCTTCAAGAATTATGCCTAGTTTGTCAAACAGACTTTGCACATCAAATCTCGGAAACACTGTGGCTATATCAACTGTGAAAACAGGACATCTTGCATCATCTGTTCTGATTTCAGCTACACAACCAACAGTGTCTCCGAAATGTCTAACATCAGCTTTGCAAATCCCTGTTACTGTTGCCTTGCCTACACCTGTGACTATATCCCCTAAAATAATCAATACAGTTGCACAAGCAGCAACAGTTCCAGGAACTACACGTTCTGTATCTCTTTCTAAAAGACAATCTCGGACTTCGGTCCAGTTTCAGTCACCGGGGGTTTCAACTACAGTGCCAACAAATATAAACACAAATAAACCTCAAACTGAATTGCCATCCCTTTCACCAAATCCAGGTAAAATAATTAACATTTCCAATTTTGCTTCTCTGCCAAACCAGCAAATGTCCCCTGCTTTCTTAAAATCGATCCCTAGTTACAGTTCTACTCCAGGTGTCACTGCCATTCACACTGCTACAGCACCATCAAATGTAACTAGTCTAATAGGGAGTCAGTTCAGTGAACCTTGTATTCAGCAAAAAATAGTCATCAACACCAGTACACCTTTGGCACCTGGTACTCAGATCATGATTAATGGAGCCCGGTTTATAGTTCCACCACAAGGTCTTGGAGCAGGCAGCCATGTTCTTCTTATATCTACTAATCCAAAATATGGACCTCCCTTAGTTGTTAATAGTGGCCAAGGTGCTCAGCCTACGCCAGTAGATAACCTGGCCCAGAAGATCACACTAGCATCAAATAATTCTTTAAGTGGGCAACCTGTAAAACATTGTCTAAAAAGCTCTACAAAAATTGTAAACTCTCTTGGGAATGCAAGTTCTCTATCCACAATACCTGCAGCACCACAAATCATAAACCCAACTGCTAAAGTTTCTGTTCCACCTCCTGTACCAACAGTGTCACTGACTTCAGTAATTAAGTCTCCTCCAGCAACTCTTTTGGCTAAGACATCTTTGGTTTCTGCCATTTGTTCTAGTAATCCTCCACTGCCAAGTAACACTTCAGTATTTCATTTGGACACGTCAGTCAAAAAATTACTGGTCAGCCCAGAAGGAGCCATTTTGAATACCATAAATACTCCAGCATCTAAGGTTTCTTCAGTCTCTCCATCACTCTCTCAAATTGTATCTGCCAGTCGAAATCCTGCCTCTGTCTTCCCTGCTTTTCAGTCATCTGGCTTAGAGAAGCCTGACACAGCTGCATCTTGAATTTAGACTAAACGAGCCAGGTTTTAAATAATGGGGCATTGTTTTGACTCCCATAAAAATTTTAACTGTTTATTATACTGTTGAAAACATACTATACATAGTTTGTGTGTGTGTTAATGTATCTTTTCATTAGCTTGCAACAAGGCTTTGATTTTCTTGGGGAGGAAAAAATCTGTTCCGTTTCACTCATTGATGTGAGTATGTTTTCAAAGGTTATTTGTTTAAAATAGACAGGATTTACCTGTCTATATGACATAAATTGAACAGTCAAGTTTGACTAGTTTGGAATAAGCTAGGGTTTTGCACACCTGCATCGACATGTTTCTTCTTGAATTTGGACTGTTGCAGCGTGTATCTCTGATACAATATTCTGTGTCTTTAGTGGAATAATATTTTTGTTTCTGTAAAAAAATATATATATATATTTATGCATTGTGAAAATGCAGTCCATTGTGTAAAATTGTACATATCCCTAAATCCTTAACAACCTGTACTAAACTATATGTACAAAGAACTATGCTGTCTTATTTATGTTTTGTTTACATAATGTATAGTTTTTTAAGTATTTTAGTAATTTTGGACCAGTGAACTGTTAGCATCAATGCAGAAGAATCTGCATGTAATAAACTGAGTTGCTGTATTTCCTTGTTTGAATACCAT EMBV3_38133 TTTGTGATCCATAACTCTTCATCTATTGCTTCTGAACAAGTCGCTCTCCTTAAATGAGTC Gene BVT0102_099790 + 1 EMBV3_38490 GK000019.2:28602932-28617675 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099475 1 XLOC_059718 NonCoding TCONS_00099475 XLOC_059718 NonCoding NonCoding - 19:28612320-28613398 - TSS73851 1078 1 TCONS_00099475_1 42 0.604823747680891 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000984103220208122 0 0 0 0 1.12642762775951e-05 5.29519073465398e-07 0 0 0 0 0 0 0 0 XM_003582782.2 GCFC2 PREDICTED: Bos taurus GC-rich sequence DNA-binding factor 2 (GCFC2), mRNA. 2e-22 111 81.45 0.11317254174397 0 noncoding GTGGAGTGGTAGCATGTGAGTTCTCCCTTCTGGCCACCCAACTTCATTTAATTAAGTTAATTAATTTAATAGCTTTTGGCTACACCACAGGGTATACAGGATCTTGGTTCCTTGATCAGGGATCCAACCCATGCCCCTTGTAGTGGAAGCGGGGAGTCTTAACCACTGGACCATCAGGGAAATCCCTCAGCTTCATTTTAAATGAGGTTTCCTGGGAATTCCTTGGCAGTCCAAAGGTTAGGACCTGAGTTTTTGCTGCTGAGGCCTTGCAGGCCAGCCAAAAAAAAAAAAAAAAGAGGTTTCCTTTCTTCTGTTTCACACTTTAAATAATTATTAGAAATGGAACTGAGGAGTCAAAGTATAATATAATTCAAAGACGTGGTAAAAATTGTCAAATTCCCTTTCATAAACTGTGCCAATTTAAACTTCCTCCAGTAGCATTTGAAATTGCCTCTTGTCTCACTCACCTTGCTTGGGTATTATAAATTGGTCTTTACCCCCACTGTCCCCAATACATTCAAGAAAGTAGATGGAGAACTGGAAACAATTTTTTTAAAAAGAACTAAGTAGAAATTCTAGAATCGAAAAATATAATTCCTTAAAAAAACCACAACTCTATAGATGAGTTTAACAACAGGTTACTATTTTTATTGTTGTTGTTGATTATTTTTTGGCCACACTGTGTGGCTTGTGGGATCTTAGTTCCCTGACCAGGGATTGAATCTGTGTCACAGCAGTGAAAGTGCTGAATCCCAACCACTGGACTGCCAGGGAATTCCCAGGTTAGACATAACAGAAGACAGGATTAGTAAACTGAAAGCTAAGTGGGCAGAAAATACTCAGTCTGAAGGATGGGACTGCGTTGGGGGGGAAAGATGGAAAATACAGAAAAGAGCATAAGAGAATATGGAATGTGATGTAAAGATCTAAATACATTTAATTTGACTCATTTAAGGAGAGTGACTTATTCAGAAGCAATAGATGAAGAGTTATGGATCACAAATTTTACAGTATTAGTGAAAGACATTAAACCACAGATTCAAGAAACTCTACAAATCTCCAGCAAAATAAATACCAC TCONS_00093177 TCONS_00093178 TCONS_00093179 . 3' 901 TCONS_00093177 TCONS_00093178 TCONS_00093179 . 3' 1978 EMBV3_26716 GGTCTGTGCAGTGAATGGGCTCCTGTATGTGGTTGGCGGGGATGATGGATCCTGTAACTT Gene GeneID:533364|KLHL3:XM_002689207:106_cdna Constitutive 0 NULL GeneID:533364 7 GENE KLHL3 NULL kelch-like 3 (Drosophila) EMBV3_05101 TGCTAATGAGGCAGGATTTGATGAGGTGTCAAGAAGAACTTCGGAGGATGGAAGGGCTGC Gene GeneID:506880|LOC506880:XM_002688403:73_cdna Constitutive 0 NULL GeneID:506880 6 GENE LOC506880 NULL similar to non-POU domain containing, octamer-binding EMBV3_05352 GGCAGTCATTAACTGCAATTGTGGCCTAAATTTCCTCGTCTATAAAATGGAGATGGTGTT Gene GeneID:515940|THRSP:NM_001040533:22_cdna Constitutive 0 NULL GeneID:515940 29 GENE THRSP NULL thyroid hormone responsive (SPOT14 homolog, rat) EMBV3_02449 GCAGGAAAGTCAGAGCCCACGATGCCAGGTGGAGAGGATAAAGCTTCCCTTTTTGGAATA Gene BVT0102_121401 - 0 NULL GK000006.2:73381958-73409451 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203575 1 XLOC_124205 Coding TCONS_00203575 XLOC_124205 Coding Coding MGC148692 6:73368391-73398917 j TSS152454 6638 1 TCONS_00203575_9 1271 9 0.782833742833743 0.0101291079934277 0.0065205741622866 0.00877304183942735 0.00305432166151639 0.00341504273932561 0.00186053678229783 0.00247441572511041 0.00199236574567119 0.00226963965402378 0.000125323389852791 3.15547433008584e-05 9.41944387994156e-05 0.000517837657886043 0.000432274129689365 0.000542008087644548 0.000210878813309754 0 7.55979479644057e-06 0.00773160093702051 0.00875310792484623 0.00469399404195788 7.82535981896325e-06 1.38204991112394e-05 9.34454414941946e-05 0.011578421318112 0.0106549717103162 0.00651969398434739 1.01289879631706e-05 2.55967513902797e-05 4.25694390930331e-05 XM_005207990.1 KIAA1211 PREDICTED: Bos taurus KIAA1211 ortholog (KIAA1211), transcript 0.0 1.191e+04 99.77 0.99939740885809 NM_020722.1 KIAA1211 Homo sapiens KIAA1211 (KIAA1211), mRNA. 0.0 4028 76.26 0.825851159987948 TCONS_00203575_9 sp|Q6ZU35|K1211_HUMAN K1211_HUMAN Uncharacterized protein KIAA1211; 0.0 1100 72.95 0.642014162077105 1 coding 0 0 0 0 0.561158879122878 0.149473615403322 -0.673269472760196 0.00022732626745995 AATGTCACAGGACAACATCCTGGGCAAAGTCAAAACTCTTCAGTGCTTTATTTTTCAGTCGACTAAGCAGTATGTTCCTGCGACAGTTGGGCAAGAACATCAAGTTTGGGCAGCCACCACCCAACGCCATTCCCATGAAGAAGGCAGACAGTGGCGAGGCTCGCTTCGAAGAGGACCCATTCCTCACCAGTCCTGTGGAAGTTGTGACTCAGCAAGACCTCATCCTCTCAGACACCGAGAACAAATCCAGTGAGACGCCAAGTTCTCCAAGTCCTCTGAATCTGCCGGGAGCCAGAAGTGAGATGGAAGAGAAGGTTGCTCCAGTTAAACCATCCCGGCCCAAGAGGCACCTTTCTTCTGCTGGCACCATCGAAAGTGTCAACCTGGATGCCATCCCCCTGGCCATTGCTCGACTGGATAATAGTGCCGCCAAGCACAAACTGTCCATTAAGCCAAAAAACCAGAGGGTGTCAAGGAAGCACAGGCGACTTGTCGGGGATCGACAGAACGAGCATGGTGGCCTCCTGCATCAGCTGTCCCTGGACCAGAACGGACACCCTGGAGAAGACAAGCCAATCTGGCATGAAAGAGAGCCAGAGCCGCTGGACTCGGAGGAAGAGAAGCGACGCCAGGAAGAATACTGGCGAGAACTTGAGGCCAAGTGCAAACGGCAAAAGGCCGAAGCTGCGGAGAGGCGACGCCTGGAAGAGCAGAGGCTCCAGGCTCTGGAGCGGAGGCTTTGGGAGGAGAATAGAAGGCAAGAATTCTTGGAAGAAGAGGAGGAGGAGGAAGAGGAAAGAGAAATACAGCTAGAGGCAAAGAAGAGGCAACGTGAAGAAGAAACGCAGAGCCTGGAAGAGCCGGGCTCCCAGGGCCCAGAGCAGAGGGAGGAAGAGGAGGGAGGACTCCCGGAGGCCAAGGAGCCCGTGTGCCCAGAGGAAGAGGTGCAGCACCTGGGAAGATGCTTGGTGCAGGAGGAGATGGAGGCTCGGAGCCAGCAGGAGGCCGAGAAGCTGTGGCAGGAGGAGGAAAGAGAGTTGGAGGAACTCCGAAGACTGGAGGAGCTGGAGGAGCAGAGGCGGTGGGCAGCTGAGAGGCAGCGGCTGGAAGAGGAGGAGAGGCAGCGGCTGGAAGAGGAGGAGAGGCAGCGGCTGGAAGAGGAGGAGAGGCAGCGGGAGCTGGAGGAGGAAAAACAGATGGAGGAGCTCAGGAGGCAGGAGGAGCTCAGGAGGCAGGAGGAGCTCAGGAGGCTGGAGGAGCTCAGGAGGCAGGAGGAGCTCAGGAGGCAGGAGGAACTGGAGGCCCAGAGATGGCGGGAGGAGGAGGAGGTGAGGAAGAGGGAAGAACTGAAGAAGCGAGAAGACTTGGAGGCCAAGAGGAGGCAGGAAGTGGAGAAGAAGCTTCAGGAAGCACCGAGAGTGGAAGAGGAGAATCAGCCGCAGCTGGACCACAAAAATGGCTTGAGGAGCCCATTTCAGAGTGACTTCGCGGAGAAAGCAGAAGAGCAAGATCACCTGAAACTTGAAAAGCTGAGAGAAAACTCTGAGAAACCGAGTATTTGGGTAAAGCAGAGCCAAGAGGCCACTGAGACATCGGGGGAGCAGCCCAGAAAGCAGGAGGATGTTCCTGGGGATCGTGGTTGTGGACGGCAGGAAATGAGGGAAGAAACCAACATGCAGCTTCCCCAGAAGCAAGAGGCCCAGGTGGAAGAAATGCTGGTGCCAGGAGAGAAGAAGGAAGCTGCTACTCCAGAAACAGACAGAAAGCTGGAGGAACTCAGATGGCAAGAGGTGGATGAGAGGCAGACCATGCCCAGACCCTACACTTTCCAGGTGTCATCGGGAGGGAAACAAATTCTCTTCCCCAAAGTCAATCTGAGCCCAGTGAAGCCCATGAAAGATGAGGGGCTCACCTCAGCTCCCCAAGAGCCCAAGGCCCCCAAAGCCAGCCCAGCCTCCCACGCCCTGCCTTCAACCCTGAGCATCCCCCACACGGCCATTCTGGTCACCGGAGCCCAGCTCTGCGGCCCGGCCGTCAACCTGAGCCAGATCAAGGACACTGCGTGCAAATCTCTCCTGGGCTTGTCGGAAGAAAAGAAGCTGGTGGATGTCCCGGCCCTGGAAAACCCACCCCGAGCCCTGGGGGAACCCCGGGCAGGCAGTGCGAAGACCAGGCCCCCACCAGAGTCTCCAAGCAGCGCAGCTGCGCTCGCTGAATGGGCCTCCATTCGATCCCGTATCCTGAAGAGCTCAGAGAGTGACCAGCGTGGCGAGAGAGAGCAGTCTCGGGCCGGGGATGAGCACACGCCCAGGGGCCGGTGTGATTCCCGCGGAAACCTCCGGAGGACCCCGCCCGTAAATGCCAAATTCTCCATTAAACCTGCCTGGCAGAAGTTCTCCGATGGGGGCGGGGAAGGGGAGAGCATCAGGAAAAGATCCGGGCCGGGACCCAGTGAAGAGGCCGTGCCCCAGCCCCCTGCTATTGATACTAAAGAGGCCCTGAAAGATGCAGAGAAACCCAGGGCTCACCAGGAGCCAACAGACACCACAGAGGGGTGCAAATTTGCCAAAGACCTTCCATCTTTCCTCGTTCCAGGCCTGCCTTACCCACCACAGAAAGCAGTGGCCCAGGTGGAGCCTGTGACCACTTCAGACAGCCAGACCACAGATGGAGCAGGAAAGTCAGAGCCCACGATGCCAGGTGGAGAGGATAAAGCTTCCCTTTTTGGAATAAAATTGAGAAGGACCAACTACTCCCTGCGCTTCCACTGCGACCAACAAACAGAACAGAAGAAGAAGAAAAGGCACAGCAGCACAGGGGACAGTATCGATGGGGCACCGTCAGCCCCAGGGAGCACACATGGAGAGCCAGAGACGGAGGCTGCAGCCCTCAAGCCTGGCCCCTTGCTCCCCCCAGAGAGGAAGCCAGCCCCGGCCCCCTGGAAGGACTCCTCTGAAAGCCCTCCCAGCCTCTCTCCTCCTGTGGCCCAGCCCGGGCCCCCACTGGCAGGTAGCCAGCCCCCGGCTCCGGAGCAGGACAAGGCGGCAAACAGGTTGCCCCTGTCCCAGAAGCCAGCCCTGGCGCCCAAGCCTGCGGGCCAGACCCCACCACCCTCCCCGCTCTCCAAGGTGAGCAGGCCCTACTTGGTGGAGTTGCTGACTCGCCGGGTGGGGAAGCCCGAGATGGAGCCCAGCGAGCCGTGCAAGGAGGGCCGGGACAGCGGCTGGCCGCCCTCACCCCCGCCACCTGAGGAGAGAAAGGAGCAGAAGCGGGATAAGGAGGAAGAGGTGGAAACCGAGAGGAAACCCGCTTCCCCGGTGCCATCCACTGGGCAAGAGAAGCCTGTCCCAACGCCGGAGGCGGGGAGGAAAGAAAAGCCGATGCTTCAGAGCAGACACTCCTTAGATGGCTCCAAACTTGTGGAGAAGGTTGAGACCGCGCAGCCACTGTGGATAACGCTGGCGCTGCAGAAACAGAAGGGGTTTCGGGAGCAGCAGGCAACTCGGGAAGAGAGGAAGCAGGCCAGGGAGGCCAAACAGGCAGAGAAGCTCGCCAGAGAACAAGTCAGTGTCACCCCACAGCCTGGAAGCAGCAGCGTCAGCAGAGCTAGTTCCCTGCACAAGCCCACCACTCAGCCAGAAGAGAAGAAGCCAGAGACACCAGTGTCCAGGCTTGAGCGCAGAGAACAACTCAAAAAGGCCAACACTCTTCCTACATCAGTGACAGTGGAGATCTCTGATTCAGCTCCCCCAGCGCCACTGGTGAAAGAAGTCACAAAGAGGTTCTCCAACCCAGATGCTGCCCCCGTGTCAACAGAGCCAGCCTGGCTGGCTTTGGCCAAAAGGAAAGCCAAGGCCTGGAGCGACTGTCCGCAGATTATTAAGTAAAGAGTGACTCTTATCCATTCTTATTGCAGTCATTGGCTCTTCTCTTGCCCTTTTTATTTATTTATTTTTTATATGAGGTAAAGAAAACCAAACTAGGGAAAAGAAGCATGTTTTATAGGCTCTAAAATAATGTTTAGAAACTGAACTGGTGGTGTTCCTTGTAAAGAGTGTATTTGCACAACCCTAGGTCCTGGTGCCTTGAGCTCCTCCTAGTTTTGAAGAGAAAATTCCGTCTGAGGGACCACATGAAGTAAAATCTCTCGACTAAGACCTCACAAGAGCCTGCCATGGCCCTTCCACACACACACCCCCACACACCATTCAGAACATGTCCTTTTGCCAACCTTTGTAGTATTAATGGTTTTCTTGATTCTTTACTCCAATTTCTTTTCTCTGAACCATTTATTTACCATGTGCTTGGGGATTTCTACCCTTTTCTAAAGTCTTAGTGAAAGGACAAGAATGCCTATTCTCCTGAATGCAGCCACTGGGAACGGCAAGTTAAAAGTCTGGTTTCCAACTCTGTGCCCGTCTCTGCTTCTCATGATTTTGCCCCGACCGGGAACTGTAACACAGCGAGACCATTCACTCTTGTAGTGTGCTGTTGAGCTACAGGCCCTTTTATACCAGAACTCTCCTTAGGGACATGTTAACCATTTGGCCCAGCTGTCTCCTAGGGAACATTTTAATTTAAATGTTTAAATAATAAATGATTAAAAAAAAAAAAAAAACTACAAATTCTGTGTCTTTGAGAATCCCCATTTAGTGTAGTTATTCTTAACAAGTTCAGGCTTTATCCCAGACCTACTCAGAGATCCTGTAAGGATGAGGCCAGATTGTGTATATTCTGGTAAAAACTCTTCATCACAAAGGGTGAGAAGCGTAGGATACATTGCTTCTAGTGCTACCTACTTTTTAAAACTCTGAAGGGGAGGCTCACTTCACCCAAAGCAGCAAAAGTGAGACAAGAAGACTAATAAAACAGCCTCCAAACCAGCCATTTATTATGGAGTGCAAGAGCCTACTGACATTACATGTCTCTGAAAATCTTTGAAGTCACTAGGGAAAGTTAACAGTTAAGACAAGATTTGAAGCCTTTTGTACTAAGGACTTCCTGTGGGGAATTTCTTTCTTTACCATAGCCAACTAATTCATATTTAGAGTCAAATGTTCAATAGCATTAAAACATCTCAAGAGTTTTAAGTGGCCTTGTTATTATATACATGAGATTTTTTAAAAGGTGTGGGGGGGCTTGGCAATTTAAAAGCCACATATATTCACTTTTATTTCCCTAAATTTGCTTTACATGAAACACAGAGCAAACCCACACGTTGCTAGGACTTAACTTACATTTCATGATGTTGACACAGTCCCTTTTTCTTCAATTCTGACTTCAAAATCTAAATACAAATCCTTTGCTTAGTGCAGCAGGGGAAGGAATTACACCCATTTTTTCTCTCCTACAAAAACACATTTTATTAGTATTTTATTAGTATCATTTTCCTTATTTATGCAATGACAATGTGCTGTTATTCTATTATGTACCTTAAAGAAAGGATGAGTGCAAAAATATTTACCATATACAAGGCATCTTCTTTCTGGAAGCAATGGCTCAGCCTCATGGTAGTACCTGGCAGCCTCATGGTAGTACCTGGAATGTGTGGTGAAATGGATAGTTGTACTTTTGCAGGTTGGAGTTAACATATATAGTGGACCTTCAACAGAATCAATGGGACGTTAATTTTTTAAATGGCTATGAGATGCAATTAATATTCCACTGCACGTTTTCCACACTGTTCATTTCTAAATCAAATATGTAGGCATTTGTTACCTCTGATGATTTCCTCACAAATATAACACTTTTTTAGTAAGAATCTTTCCACTTAGAGCCCTAGAATTATAGTGCTACTTTAATTCTTCTGCATTGACTTTTTCTTTCATGCTGTCAGCTTTGAATAACAATCACAGTAATGGCAGAGAACAGGGGAAGAGATCAGGTCATTAACAAAGAATGGTAGACAAGTCAAGTCTGTACTGGCTTACCACTGAGCCCATGCAAAGGAGGAGAAATACCTCAGTTAAAAATTTTCCATCAAAATCTTTAAGAGTATACTGAAGAAAAGACAGTCATAGCACTTCCAGCAACTTCTAAAGGCTACATGTTTAATACTTCATGTAAAAATTACTCCAAATTTGCACTAAATACCAATGAAGTGTTATTTTTCTTTAGTTGTGTTGCAGTCTTTTCTGATCAACAAACTATGGGGGAAATTCTGTAAAGCATATAAGAATTCAAGACTTTTAAAAGAAATGAATGATTGCTAGTTAAATACACAAGCTTTTTTTTTTTTAACAAATATACACTTCTGGCAAGGTTATAGATGATTAACCTCTGTTCATAAGACTTAAATATACAAAACTAGAGGTTTTTTGTTTACTTTTTTTTCAAGTGCAATTGTTTCTTATACATGTTACTATTAAATTATCATTTTAGCCAGTTATTAGCAAATTGTAGTATGTATTGTCTCTTCTTGTGACATTTAGTTTTAATTGCTTATTTTAAAGCAGAAACATTAGAATTACAAGTGTCTTGCAATATTTTTATCAACAATAAAATGTAGTAGACTTAACAATGAAAATACCTTAGTGTGATTTTAATATTATTTTGAGATTTTGGTTGTATAAAGTTTTAATGTAAAATGTCCATTATTGAAGGAAAAAGACCTTTCAATAAAAAATACCCACAAGATC EMBV3_33425 CTTACCCCCTAGTGAAAGCAGAGACTTCCTGAACCAGCTGAGGGAAGAAAGGACAGATTC Gene GeneID:517947|DQX1:NM_001035322:35_cdna Constitutive 1 NULL GeneID:517947 11 GENE DQX1 MGC127670 DEAQ box RNA-dependent ATPase 1 EMBV3_09990 GGGCACTTTGCTCAGGAAAGTCCACAAAGTTTCTGGAAGAAGGATAGGAGGATCCTTTTG Gene GeneID:540033|DNAJC27:NM_001098109:198_cdna Constitutive 3 NULL GeneID:540033 11 GENE DNAJC27 RBJ DnaJ (Hsp40) homolog, subfamily C, member 27 EMBV3_02957 TGGACACCCAGAAGGACGTTCAACCCCCAAAGCAGCAGCCAATGATATATATCTGTGGAG Gene GeneID:100296684|LOC100296684:XM_002692648:61_cdna Constitutive 0 NULL GeneID:100296684 14 GENE LOC100296684 NULL similar to DNA directed RNA polymerase II polypeptide K EMBV3_10646 TGAGCTTAGGGATGTGCTTGCAAACCCTTTTCGAGAGTCCTCACCACCCCAACATTGCCA Gene GeneID:615929|GGT7:NM_001076401:1303_cdna Constitutive 0 NULL GeneID:615929 13 GENE GGT7 GGTL3 gamma-glutamyltransferase 7 EMBV3_22279 TAAGACCAGAGTGTTCTACCAGGCTTGGGGGCATCTCGACAAAGACAGATGCATTAGTGG Gene BVT0102_186483 + 0 NULL GK000017.2:66435619-66467520 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076017 TCONS_00076020 TCONS_00076023 TCONS_00076016 TCONS_00076019 TCONS_00076022 TCONS_00076018 TCONS_00076024 1 XLOC_046710 Coding TCONS_00076018 XLOC_046710 Coding Coding SSH1 17:66389544-66440465 j TSS57160 8266 2 TCONS_00076018_4 442 0.0166948947495766 14 0.837941869599372 0.00381695319381188 0.00312300949979504 0.00373623937968884 0.00161529273231919 0.00202241819115313 0.000846919292489152 0.000482879249305907 0.00143920069582448 0.00225783008484622 0.00119885649576307 2.56747493885477e-05 2.66434899579794e-05 0.000263912625556655 0.00145215370942751 0.000892018013492619 1.50617416034136e-07 8.13652964246792e-50 5.86743657648429e-48 0.00337737385111317 0.00184686221655117 0.00103846425290629 0.00114027992476838 7.13020004772334e-05 2.49921597200513e-66 0.00527632943706509 0.00498528980496314 0.00298200817710607 1.10519676647536e-05 0.00048641723026398 0.000154354522902991 XM_618431.5 SSH1 PREDICTED: Bos taurus slingshot protein phosphatase 1 (SSH1), mRNA. 0.0 1.150e+04 100.00 0.770989595935156 NM_001161330.1 SSH1 Homo sapiens slingshot protein phosphatase 1 (SSH1), transcript 0.0 1633 90.23 0.144810065327849 TCONS_00076018_2 sp|Q8WYL5|SSH1_HUMAN SSH1_HUMAN Protein phosphatase Slingshot homolog 1; 0.0 786 96.83 0.877030162412993 2 coding 1 0 1 1 -1.02266104405238 0.0964446304053061 0.0146855390549255 0.86956302914993 CAGTTGGAGGCCGGCAGCGATGAAGATCGAAAGTTAAACCACAGCTTAAGTGAGAGCTTTTTCATGGTGAAAGGAGCAGCCCTCTTCCTACAGCAGGGAAGCAGCCCTCAAGCCCAGCGGAGTCTTCAGCACCCCCACAGGCATGCAGGGGACCTGCCTCAACATCTTCAAGTCATGATCAACCTTCTGCGTTGTGAAGATAGAATCAAGCTGGCCGTGCGCTTGGAGAGTGCCTGGGCGGAGCGGGTCCGGTACATGGTGGTGGTGGACAGCAGCGGGCGCCAGGACACGGAGGAGAGTATCCTGCTGGGAGTCGACTTTTCCAGTAAGGAGAGTAAAAGCTGTACCATCGGGATGGTTCTCCGACTGTGGAGCGACACAAAAATCCACCTCGATGGAGATGGTGGATTCAGCGTCAGCACCGCTGGGAGGATGCATGTCTTCAAGCCTGTGTCTGTCCAGGCCATGTGGTCTGCCCTGCAGGTCCTGCACAAGGCCTGCGAGGTGGCGCGGCGGCACAACTACTTCCCAGGGGGCGTGGCGCTGCTCTGGGCCTCCTACTATGAGAGCTGCATCGGCTCCGAGCAGAGCTGCATCAACGAGTGGAACGCCATGCAGGACCTCGAGTCCACGCGGCCCGACTCCCCCGCCCTGTTCGCAGACAAGCCGACCGAAGGGGAGAGGACGGAGCGTCTCATCAAAGCCAAACTCCGGAGCATCATGATGAGTCAAGACCTGGAGAATGTGACGTCCAAAGAAATTCGTAATGAATTAGAGAAACAGATGAACTGTAACCTGAAAGAATTCAAGGAATTCATAGACAACGAGATGCTCCTTATCTTGGGACAGATGGACAAGCCCTCTCTCATCTTTGACCATCTTTATCTCGGCTCTGAATGGAATGCATCCAACCTGGAGGAACTGCAGGGCTCAGGTGTTGACTATATTTTAAACGTCACTAGAGAAATAGATAATTTTTTCCCTGGCTTATTTGCGTACCATAACATCCGAGTCTATGATGAAGAGACCACAGACCTCCTCGCCCACTGGAACGAGGCGTACCATTTTATAAACAAAGCAAAGAGGAACCACTCCAAGTGCCTAGTCCACTGCAAGATGGGTGTCAGCCGCTCGGCTTCCACGGTCATAGCCTACGCGATGAAGGAGTTCGGCTGGACTCTGGAGAAAGCCTACAACTACACCCCCTGCTGCGGGCCCCAGGCGACGAGACGGGCGGCCCCGTCCACCTGGAGGATCTGGAGAGGGACGCTCTGCTGGAGGAAGCTGCTCAGCTGGCAGAGGTGTCCCAGCCAGCCAGACACCCCCCAGAAGGTCCGGGACTCTGCGAGAGGGAAGTGACGAAGAAACCAGAGCTTGAGCCGCAGGCGGAGGAGATGGAAAGGGAGGAGGCCCTGGGAGCCCGGAGGTGGAGGCAGCCGGCAGCCCAGCTCGATAACCTGCTCAACCGGGAAAACCTAAATAACAACAACAGCAAGAGGAGCTGCCCGGACGACCTCGAGCATGACGCGATCTTCGGGATCCTTAACAAAGTGAAGCCTTCCTACAAATCCTGCGCTGACTGCATGTACCCTGCAGCCGGCGGGACCCCCGAGGCCTTCGGGGAGCGATGCAAGAACCCCGGTGCTGCCGCCATCTGCACCCAGCCCACCTTCCTGCCCCAACTCACGTCTTCCCCTGTGGCCGGCAGGTCCCGAGCTTTGGAAAAACTGGCCTCTGGCCCAACCAATACTGCCCTCTTCCTACCACCAACAGGCTCAAGGAGGCCAGACACCGGCGGCCCAGGGGCCGGGGCTGCCCCGGAGCCCCCAGCCAGCCTTCCGGAACCTTCCAGAGAGACTCACAAAGCCCTGCCAAAGTCCCTCCTCGTGAAGAATTCTCACTGTGATAAGAACCCTCCCGGCTCGGAAGCAGCGAAGGAAGACTTGTCACCCAAGAAAGATCCGAAGCCGGCCAAGGACCTGCGGCTCCTGTTCAGTAAAGAGGCCGAGAAACCCACGAGCAACAGCTACTTGATGCAGCACCAGGAGTCCATCATCCAGCTGCAGAAGGCAGGCCTGGTCCGCAAGCACACCAAAGAGCTGGAGAGGCTGAAGGGCACGCCCGCCGAGCCAGGGGCCCTGTGCCGGGACGGCCCGGCCGCCATCCCCGAGGAGAACCAGGACTTGCCTCTGCCAGGCCAAGCCCCGGGCCCCGAGAAGCCCGAGCCCGGCCCCTCTCTGCTGGAGGGAGCCCCGCTGAAGAGCCCCCCGCCCTTCCTATGCCGCCCGGACCACGCCAGTCACTTCTCCAGAGACTTCCTGAAGACCATCTGCTACACCCCCACCTCGTCCTCCATGAGCTCCAACCTGACGCGGAGCTCGAGCAGCGACAGCATCCACAGCGTCCGCGGGAAGCCGGGGCTGGTGAAGCAGCGCACGCAGGAGATCGAGACCCGGCTCCGGCTGGCGGGCCTCACCGTCTCGTCCCCGCTCAAGCGCTCCCACTCCCTGGCCAAGCTCGGCAGCCTCAACCTCTCGACCGAGGACCTGTCCAGCGAGGCCGACGTGTCCAGCGCGGCCGACTCCCAGGACGCCAGGTTGAGCGAGTCTTCCCTCTTGCACGAGCCACCACCGGCTGCCAGGAGTCCGGCCGCCACCTCGAAACCATCAGGGAAATCTGCCCCGGAAAACTTGAAGAGCCCTCCGTGGCCGGGCAAAAGCTGACCCACCTCTGGCTGCGTTTGGACTTGTGCGATCCCTCCCTTAGCCTCCCTGTGGGTTTCTGGTCCGCCCCTGCGTCTGGATGTCCCTTAAGCAATTGGCGTTATCCTCGTTTTTCCTCCCCGCCTCTTTGCAGAGGGGAGAAGAAGCAACAAAATTGCCGAACATACAGCACAAGAAGAGAGAGGGGAGCCTGGGTGTTCGTGGCCTGTGAGAACCAGCAGCTGTCGGCCAGTAGACTCTGACCCCAAAGTGAGTGTTTCCAAGAAGACTTGTGTTTTAAGAAGAGCATTTATACGGAGATGTGCACGCATCAAAAACCGCTCCATGCACAACCTGCAAACGAATGGCCGTGGTGTCGCGTCGGCACTGCAGGGGCTCATCTTCGCTCATGCGGGCCCTCGTGGGGAAACCCGTGGATGGCACTAGAATTCCTACCTCTAATCCTGCTGTGCACGTTTTTTATTTTTAAAAATCCAGTAATGACCAAGGCTTGTTCCAGGGGAAAATGCTGTGTCAGAAAAGGTTTTTTTTTTCCTAAAGAGAACTTTTCTGTTGTTGCTGTCAGGACCCACGCCCCCCTCCCCCAAAAGCGTCAAGACTTTTAAAGTTGCCCGCACCAAACACCGCTACTTAAAGCGACAGGAAGGCACAGACACCGTCGTCAGACCGACCCTGGGGCGTGTGGAGGTCCTCTGAGCTTTGACTTCCCGGTGCTGGTGTGTTGTCACAGCTGAGTGATGCGGGTCTGGCCAGCCCTGGCGGAGGCAGGGGCAAAGTGCATGTGTGTGGTCCTCGTCCCCCCCATCCGGGGAGAAGGACCCACAAAGTTATCGTTGAGTCTCACCTGCTGCAGAAGGCCACAAGGTCCTACGAGGATTTTGAAGGCGCTTGAGCATCTGGCAGGGCTGGGGAAGGGGTTCGGAGACATGGGTCACCCCACTGGAGCTTCGACACTCAGGTTCATTAGGTCACACGTACTCAAGTCTGGGGAGGAAAGGGAGAGCTCAGCAGTGAGAGATGCTCAGTCACTCGAGGAACAGCTCGGCAGCAGCTTCTCCGAGAAGCGGGACTGGTGGGAAGCTGCTCAGATGTTTACAAGTCGCCCCTTCCTGCGGTGAGGACGCTGCTTCCTGCTTCTCCATGGCTCTTCCCAGCAGGCCGGGAAGGCTTGAGGTCCCGCCCGGCTCCAGGGGTAGCCCCTCAGGATCTTGAGTAGAGGGACTCCTCTGATGTCAGCAGGCAAGACAGGGTGTTAAAACATTTTGGAGAGAGAAAAGAGGTTGGTTAGATTTCATGCAGGGGTCAGCCAACCATGGCTGGGGTGTGTTGCCCCATGAGCTAAGATGGGTTGTTGTTTTTTTTTTTTTTTTCATATTTTCAAAGGGTTAGCCAAAAATTACCAGACAGGCAACAGAGACCATGTAGCCTGCAAAACTGAAGATACTTTATAATCAGGCCCTTTATAGAAAACCTTTCCTGAGCCCTGGTTTTACTTGAAAACCCAGGGCTTGCCCAGGCCCTTGGGGAAGAAACTCCGGGGAGTTAGAAGGCCTCCCCGCCTCTTTTGTCACCTCAGGCCAAACCCTGCCCTCCTCCCGACCCAGTCCTTGCCAGCCCACCCCAGTGTCTGTCCCCTGGGCATCGGGGGACCCCTACTGGCTGAAGCTTTCCCACAGTTGCAGCTTGCCCTCAGATGGGTCCACCGGATTATTTCAGTGAAACTAGACATCCTTCAAGGGCCAGCCGAATTCCAGAAGTGGGTAATTGAGTCTCCATCTTATGTTGGTCCAAACTGGGCCTCTCAGAGCAACCCAAGGCCAGTCCATGTTTCAACTCGTGGGTAGAGCTTTTGCAAAAAACCCTCTCTCCAGAAATTTTTTCTCCCTGACCTTTTTTTTTTTTTTTATCTTTTTAAGTATATGTTATTTCACCTAATAGGAATTTGTTTCCCCACCACTATCAATTGAAATCACCTAATATGATCCACTTATTCCAGAAAACCCAGATGGGTCTCTGCCTCTCTCAGCCAACACAAGAGCATAGTCTCATAAAAAACGTATCAGGTTCAGTGTTTTGCCAAATTGCATTTCGTGTGGTGGGTCAATTTTTGTATCAAAAGAATCCTGTAGATTTGATGATGACAGGCTTATGTTGGATTTTTTTTTTTTTTTTTTCTTTTAACCATGCCTGGGTATGATATATTCTTGAAGACCTTCATTTTGAAAGCCATAGATTTTTTTTATCCAGGTAAAGGATGGGAAGAGGATTACAAAGATGAGAGGGTCTTTGGCTTTTGGCAGAGTTATCCATTCATTGTCAGAAGTTTGTCTGTTAATGAAACTAGGGCCCAGGTCCCCACCATCAGAACAAAGCAAAGCCTTCTTGATGGGTAACATTCTAGCCTGGAGAAGAGAATGAAGGTTTTTCTCCCAGATCAGTGGCATAGAGACCAATATGGATTACTATTTTAAATGTTAGCTAATAAGACCAGAGTGTTCTACCAGGCTTGGGGGCATCTCGACAAAGACAGATGCATTAGTGGTCTCCGAAAAGAAACCTTGCACCATAAGCTTCTTGACCAATGCTTTGTCTGTACACTTAGCGGATGGGGGAAATTCTGAATGTGGGCGGCAGAGGTTTATGCTGTGAAAGTCATGGATTTTGGTGACCAGCTATCTTCATGGAATGCTGAATCAGCTTGGTACCCCATAAATTCAGCTGTGTTTCCTCTTCCTCCTCCACCTCCCCACCATTTTCCCTCTCATTCGCGTGGCATGCCAGCAGGAGATTCAGCTTGTCTAGATCTCTCTCTCGCATTGACACACAGAGGTCTTCTCATTGAGTTTTGTTGAGTCAAAGCGGGGAACTGGTCACAGAGAGAGGGGATACAGTGCTGCCCTCTAGTTGGCACTTGACCTTGCCGATTTCCGTATCTTTGTCTCGTGGCAGCGTGCATCACTGCATGAATGTCTTGAGAACAGGGTTCTTGCCCCCAGTCTCCCCTGCCTCCTTGGTCTCAGTGCAGGCACCCGTGCCAACCTCCAGGCTGCCAAACAGCTCTCTGCTGGGTGGGGCCACCCATTCCATTGGGCAGGAGTCTACTCTGTCCAGTCCCCTTGTGCTCCATCCATCCCACCCTTTCCAGCTAAGAAAGCATTCCAGCCCTTTCTAAGCATTTTCCCTCCTGGATAAGCCCAGAGGATGGATACCTAGGGTGGAGCCAGAACAGCCATAGAATTAACATCAGGACAACCCTGTATGTCAGCCCTGCACTCAGGCCCCATCCCAGGGGGGCCCCTGCTCCTTAGTGAGAGGAAGTGCTGGCATCTAGTCGAGGTCATGTGCAGAATCTCACCCAAGGTGTTAGAAGACCAGCGCACTGTCTGCCGCCTGGAAACACTGTTCTGGCTTGCCATCCAGCAGGGCTTCCCTGGACGCGCACGGGCAGCGAGTCCCTCTGGGTCCCTCCGGCAGGGGAGCCAGGTGGTGGGAGATTGGGACGTCCGGCCAGCACGGTGCAGGTTCACCTGCTCCTGTCCTACCCCAGCATCTTGGCCAGACGAAGGTCCTCACGGATCCCCGTGTTCAGCTACTTGGTCTTTTTATCATCTGCTCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGTAAATCCCATGGACGGAGGAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAGGAGTCGGACACGACTGAGTGACTTCACTTTCTTTCTGCAGATGCAAACCTGTGTGTGTGAGATCGTTCTGCACAGATACATATATTTGAGTCTATACATCTGTCAGTTAAACGAGAGCATCACGTGCGTTCCCCTTCCCTCATCCACACACACGCCTGTCACCCAAGCTGTGGAGTGGGTCACCTTGAATGGTCTGGAGCGACACCGTGCGGTGGATCTGGACGTGACCGCCTCATTTTTTTGTCCTGTAGTAGACCCCCCTGGCCCCGGCTGGTGTCATTCTCCTAGCGGGACCCTTTAAAGCCAGACCCCCATCCTCCACTGTCCCTCTGTCAGCCACACCGTTCAAGGAGATGGCCTCTCCCTGCCTCCTCTTCAACACTGTAATTATTGTTTTACAATCGAGTGCCTTAATAATAGTTTACAAATACTGTGTATTTATGGGCAGCCGTTCCGCTTTCGCCTTCTGTGATTGGGTACTTTGCCTTGTCTGCGGTGGTTGGCGCTGGGGCTGGAATTTGCCTGCCCCATACTTGGGCTGATCTGCTGGGCAGCCTGCCCACAGCCAGGCCAGGGGCATCGCTAGAAACAGCGCTGGCTGGCGGTCCCTATGGGCGAGGCAGGCGCTGTTTCAGCCGAGGGCCCGTAGTAAACGAAGAAAAGCCAGGATTGGTAGGCCAGCCAGCTCTGGCCCCCTCTGGACCACAGCCCTGCCTGTCTCCTCTACCCTCCCCATCACACAGCTGTTCTCCTGTTCAGTAGAGTTTTTCTTACCATCTTGTCTCCCCCACCCCGTTTTCCTCTCTTTTGGTGTCCTGAGCTCTTTGCAACAAAATGCAGGTACAGATCTCCCTCCAGTCAGGAGCTCCCCTCCCCCCAAGACGGCCTGCCCTTTGGTTTCCAGAAGCTGCCAGTGGGTGCCAGTGTGTTGGGTTACGATATCAATGATTTTTTTTATTATATATTGTTTTTCTTCTTGGTTTTTTTACATTATCTATTTAAAAGGCAGTATCTTTTGTACTGTGAATTTGCAGTAGAAGATGCATAATGCACTTTTTTTTTTTTTTTTTACTTCTGTTGGTGTGTACTGTATATAGTCTGTGTGCTTCTTGTGAGGAAAATAAACTTTCTTTATAAATGGTCGATGACCTCTGAACTTGTGCACAAAAAACAAAGCAGCAGCCCCTCCAGCCCTGGCCAGGAAAGTCGGGACACAGCTGTCTTCTGGCCCCGTGCTAAACAGCTGGACAAGTGAGACCAGAGAAAGAACCAGGAGAAAGGTCAGCTGCTGCAGGAATCGTCTTTTTTTTCTTCCTGATTTTGCCAGTAAGAAAGAGCGGGCCAACTTTTGGTATACAAGGTGGTCACTTGTATCCCAAAAAAACCTGTCCTGTCTGCCCCCACCTTGGGTGGGACTTGAACTTGAGGGGTGTGCTGGAGAAATTCACCACCTTAACTGCTCACACACAAGAGGGGATGGGGTGGAGGGGGCTCATCATGGCTAACAGCCAAGACAGGAACCCCAGGGGACCCCAGTCACCAGACACAGCAAAGGCTTAGGCCGAGCTCAGGCCACAGTTCACTGCAGATAGAGCTCTGGGGGCTCTCCTCCCATGGTGTCTGAGCCAAGCCAGGCTGCTGCCAAAGGAAAACCCTGCCTTCCTGGGGTTCTGTGCATCTGGCAGGGCAAACGGCGCTCATAATTCCTCTTCGCTGTCTTTGGTGCCATAGCTGCCCGTCCCACGGGCAGGTCACATGAGTGTCATCCTCCTGCCACTAGTGCCTTGACAGGACTACGAAATTCCAGAGCCTGTGGGTCCAGAAGCAGTACACAC EMBV3_22956 GAATGGCTGGGGCACAACCATTCTTAGCAGGAAAGACATGGACCAATTTGTAGAAAACTC Variant GeneID:768003|C9H6orf94:NM_001077063:17_cdna 67^128 1 EMBV3_41462 GeneID:768003 9 GENE C9H6orf94 C6orf94 MGC134184 chromosome 6 open reading frame 94 ortholog EMBV3_20484 GATAAGAACAACATCTGCAATGGCCAGAAACGTCACCAAGAGGAACAAGCGCTGCAGAGG Gene GeneID:404073|LOC404073:NM_205774:112_cdna Constitutive 0 NULL GeneID:404073 20 GENE LOC404073 MGC133678 histone H2B variant PT15 EMBV3_12337 CTACGGGCACTACTTCGACCTCTGCCTGGTCAACAGCAACCTGGAGAGGACCTTCCGTGA Gene GeneID:509346|MPP2:XM_002696038:316_cdna Constitutive 0 NULL GeneID:509346 19 GENE MPP2 NULL similar to palmitoylated membrane protein 2 EMBV3_06318 GACGTCAACCCAGCCACGTCTTAAAAGGGAAAGCAAAGAGGACAAAAGAGCACGAAAGCG Gene GeneID:507702|LTV1:NM_001075326:2_cdna Constitutive 0 NULL GeneID:507702 9 GENE LTV1 MGC142918 LTV1 homolog (S. cerevisiae) EMBV3_05079 TACCCAGAGGCTGAAGTGATGTGTGACGAGAACGTGGAACAGGTGTATGTGGAATACAGG Gene GeneID:282656|RPGRIP1:NM_181034:28_cdna Constitutive 1 NULL GeneID:282656 10 GENE RPGRIP1 NULL retinitis pigmentosa GTPase regulator interacting protein 1 EMBV3_13011 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43017 GCGTTTCCCAAAAGGTGGTGCGTATCACTGGAGGTATTAGAACTGGTTTCTGGTGGTAGG Gene GeneID:510352|SPATA7:NM_001098928:100_cdna Constitutive 3 NULL GeneID:510352 10 GENE SPATA7 MGC152639 spermatogenesis associated 7 EMBV3_28752 GAGGACATGGGCTACATACCAAGTAATCTGAAAAATGAGACAACTAGGTTTCAGGGGGCT Gene GeneID:613413|HNMT:NM_001035434:14_cdna Constitutive 1 NULL GeneID:613413 2 GENE HNMT MGC137515 histamine N-methyltransferase EMBV3_33583 CACATGGATTGTTCCCTTAGTACTGCACACCTTTTCTATGTAAATTTCAGATTATCTAAG Gene BVT0102_439554 + 0 NULL GK000001.2:25289474-25620149 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003039 TCONS_00003043 TCONS_00003034 TCONS_00003037 TCONS_00003042 TCONS_00003030 TCONS_00003044 TCONS_00003036 TCONS_00003035 TCONS_00003038 TCONS_00003033 TCONS_00003032 TCONS_00003040 TCONS_00003046 TCONS_00003041 TCONS_00003031 TCONS_00003045 1 XLOC_000773 Coding TCONS_00003046 XLOC_000773 Coding Coding ROBO1 1:25619014-26796052 = TSS1589 6687 1 TCONS_00003046_11 1653 31 0.994345122540753 0.00123155493545285 0.000674536241929815 0.00140808349335575 0.000906928451524714 0.00151366374253682 0.00025539773786025 0.000250924016398501 0.000504814620098774 0.00177632568281362 0.000289203504850083 1.9453121730147e-06 4.32387530724402e-05 0.00011892190684007 0.000226421378273023 0.00030136045492111 0.000207292430397292 5.07472121890089e-07 8.23585073416963e-08 0.000487172995557764 0.000652253369946008 2.67280595096386e-05 2.24119195009277e-07 2.73507238659917e-07 2.53869792861989e-09 0.00133801522138447 0.00117687054066962 0.000390232727230834 1.981993172276e-07 3.70806237574019e-05 2.50709200030226e-06 NM_001192888.2 ROBO1 Bos taurus roundabout, axon guidance receptor, homolog 1 (Drosophila) (ROBO1), mRNA. 0.0 1.206e+04 100.00 0.999850456108868 NM_002941.3 ROBO1 Homo sapiens roundabout, axon guidance receptor, homolog 1 (Drosophila) (ROBO1), transcript variant 1, mRNA. 0.0 9243 90.56 0.999700912217736 TCONS_00003046_11 sp|Q9Y6N7|ROBO1_HUMAN ROBO1_HUMAN Roundabout homolog 1; 0.0 3066 96.80 0.999395039322444 0 coding 0 0 0 0 1.2377647382622 0.0666677031433811 -0.0363657115256964 0.500091914787247 ATAAAACATATCTGTATAACTGGCTGGGTGTAATGCAAGGAAGGGACAAAGATGAAATGGACACATGCTCCTTTTTTGGCCATAATATCACTCCTCAGCTTGTCAAAAAGTCACTTGTTCCTGGCACAGCTTATTCCAGACCCTGAAGACGTAGAGAGGGGAAAAGACAACGGGACGCCCATCCCCACCTCCGATAACGATGACAATTCGCTGGGCTATACAGGCTCCCGTCTTCGTCAGGAAGATTTTCCACCTCGTATTGTTGAACACCCGTCAGATCTAATTGTCTCAAAAGGAGAACCTGCAACTTTGAACTGCAAAGCTGAAGGTCGCCCCACACCCACCATCGAATGGTACAAAGGTGGGGAGAGAGTGGAGACAGACAAAGATGACCCTCGCTCACACCGAATGTTGCTGCCAAGTGGATCTTTATTTTTCTTACGTATAGTGCACGGACGAAAAAGTAGGCCTGATGAAGGGGTCTACGTCTGTGTAGCAAGGAATTACCTCGGAGAGGCTGTGAGTCACAATGCATCGCTGGAGGTAGCCATACTACGGGATGACTTCAGACAAAACCCTTCCGATGTCATGGTGGCCGTGGGAGAGCCTGCAGTGATGGAATGCCAGCCCCCACGAGGCCATCCTGAGCCCACCATTTCATGGAAGAAAGATGGCTCTCCATTGGATGATAAAGATGAAAGAATAACTATACGAGGAGGAAAGCTCATGATTACTTACACCCGCAAAAGTGATGCAGGCAAATATGTTTGTGTTGGTACCAACATGGTTGGGGAGCGTGAGAGTGAAGTAGCAGAGCTCACTGTGTTAGAGAGACCATCCTTTGTGAAGAGACCTAGTAACTTGGCAGTCACTGTGGATGACAGTGCGGAATTTAAATGTGAGGCCCGAGGTGACCCCGTGCCCACCGTACGATGGAGGAAAGATGATGGGGAACTGCCCAAGTCCAGATATGAAATCAGAGATGATCATACCTTGAAAATTCGGAAGGTGACAGCTGGTGACATGGGGTCATACACTTGTGTTGCAGAAAACATGGTTGGAAAAGCTGAAGCATCAGCCACTCTGACGGTCCAAGTTGGGTCTGAACCTCCACATTTTGTTGTGAAACCCCGTGACCAGGTGGTTGCCTTGGGACGAACGGTCACTTTCCAGTGTGAAGCAACAGGAAATCCCCAACCAGCTATCTTCTGGAGGAGAGAGGGGAGTCAGAATCTGCTTTTCTCATATCAGCCACCACAGTCATCCAGCCGTTTTTCAGTCTCCCAGACTGGTGACCTCACTATTACTAATGTCCAGCGATCTGATGTTGGTTATTATATCTGCCAGACTTTGAATGTTGCCGGAAGTATCATCACAAAAGCATATTTGGAAGTTACCGATGTGATTGCAGACCGACCTCCCCCAGTCATTCGACAAGGTCCTGTGAATCAGACTGTAGCAGTGGATGGTACTTTAGTGCTCAGCTGTGTGGCCACAGGCAGTCCAGTGCCCACAATTCTGTGGAGAAAGGATGGAGTCCTTGTTTCAACCCAAGATTCTCGAATCAAACAGCTGGAGACCGGAGTACTACAGATCCGATATGCTAAGCTGGGTGATACTGGTCGATACACGTGCATTGCATCAACCCCCAGTGGTGAAGCAACGTGGAGTGCTTACATTGAAGTCCAAGAATTTGGAGTTCCAGTTCAGCCTCCAAGACCCACCGACCCAAATTTAATCCCTAGTGCCCCCTCAAAACCTGAAGTTACAGATGTCAGCCGAAATACAGTAACGTTGTCATGGCAACCAAATTTGAATTCAGGTGCAACTCCGACGTCTTATATTATAGAAGCCTTCAGCCATGCATCTGGTAGCAGCTGGCAGACTGTAGCGGAGAATGTGAAAACAGAAACATTTGCCATTAAAGGACTCAAACCTAATGCAATTTACCTTTTCCTTGTGAGGGCAGCCAATGCATATGGAATTAGTGATCCAAGCCAGATATCAGACCCAGTGAAAACACAAGATGTTCCCCCAACCAGTCAGGGGGTGGATCACAAGCAGGTCCAGCGAGAACTGGGAAATGTTGTACTGCATCTCCACAACCCCACCATCCTTTCCTCCTCTTCAATCGAAGTGCACTGGACAGTGGACCAACAGTCTCAGTATATTCAAGGATACAAAGTTCTTTACCGCCCGTCTGGAGCCAACCATGGTGAATCCGAGTGGTTAGTTTTTGAAGTGAGGACCCCAACCAAAAACAGTGTGGTTATCCCTGATCTCAAGAAAGGAGTCAACTATGAAATTAAGGCTCGTCCTTTTTTTAATGAATTTCAAGGAGCAGATAGTGAAATTAAATTTGCCAAAACCCTAGAAGAAGCACCCAGTGCCCCACCTCAAAGTGTGACTGTATCAAAGAATGATGGAAATGGAACTGCAATTCTTGTTAGTTGGCAGCCACCTCCTGAAGATACTCAAAATGGAATGGTCCAAGAGTATAAGGTCTGGTGTCTGGGCAATGAAACGCGATACCATATAAACAAGACAGTAGATGGTTCCACCTTTTCTGTGGTTATTCCCTCACTGGTTCCTGGGATCCGATATAGTGTAGAGGTGGCAGCCAGCACGGGGGCTGGGTCGGGGGTGAAGAGTGAGCCACAATTCATCCAGTTAGATTCTCATGGAAACCCCGTGTCACCTGAGGACCAAGTCAGCCTTGCTCAGCAGATCTCAGACGTAGTGAAGCAGCCGGCATTCATCGCAGGAATCGGGGCTGCCTGTTGGATCATCCTTATGGTTTTTAGCATCTGGCTCTATCGACACCGAAAGAAGAGAAATGGGCTGGCTAGTACTTATGCGGGTATCAGAAAAGTCCCGTCTTTTACCTTCACACCAACAGTAACTTATCAGAGAGGAGGCGAAGCTGTGAGCAGTGGAGGGAGGCCAGGACTTCTCAACATCAGTGAACCTGCCACACAGCCATGGCTTGCAGACACATGGCCTAACACTGGCAACAATCACAATGACTGCTCCATCAATTGCTGCACGGCAGGCAATGGGAACAGTGACAGCAACTTGACCACGTATAGTCGCCCAGCTGATTGTATAGCAAATTATAACAACCAACTGGATAACAAACAAACAAATCTGATGCTCCCTGAGTCAACTGTTTATGGTGATGTGGACCTTAGTAACAAAATCAATGAGATGAAAACCTTCAATAGCCCAAATCTGAAGGATGGGCGTTTTGTCAATCCATCAGGGCAGCCCACCCCTTATGCCACCACCCAGCTCATCCAGTCAAACCTCAGCAACAACATGAACAATGGCAGTGGAGACTCTGGCGAGAAGCACTGGAAGCCACCCGGACAGCAGAAACAGGAAGTGGCACCAATTCAGTATAACATCATGGAGCAAAACAAACTGAACAAAGATTATCGTGCAAATGACACAATTGCTCCAACTATCCCTTACAACCAGTCATATGACCAGAATACTGGAGGATCCTACAACAGTTCAGACCGGGGAAGTAGTACATCAGGGAGTCAAGGGCACAAGAAAGGGGCAAGGACACCCAAAGTGCCAAAGCAAGGTGGCATGAACTGGGCAGACCTACTGCCCCCTCCCCCAGCACATCCTCCTCCTCATAGCAACAGTGAAGAGTACAGCATCTCTGTAGATGAAAGCTATGACCAAGAAATGCCATGCCCCGTGCCCCCAGCACGGATGTATCTGCAACAAGGTGAACTAGAAGAGGAGGAAGATGAACGAGGTCCCACTCCCCCTGTGCGGGGAGCCGCCTCTTCTCCGGCTGCCGTGTCTTACAGCCATCAATCCACCGCCACTCTCACGCCCTCTCCACAGGAAGAACTCCAGCCCATGTTACAGGATTGTCCCGAGGAGGTGGGCCATGGGCAGCACCAGCCTGACAGGAGACGGCAGCCGGTGAGCCCACCTCCACCTCCAAGGCCGATTTCCCCACCCCACACCTACGGCTACATTTCAGGACCCCTTGTCTCAGATATGGATACGGATGCGCCAGAAGAGGAAGAAGACGAAGCCGACATGGAAGTAGCCAAGATGCAGACCAGGAGGCTTTTGTTACGTGGGCTGGAGCAGACCCCTGCCTCCAGTGTCGGGGACCTGGAGAGCTCTGTCACCGGGTCCATGATCAATGGTTGGGGCTCTGCCTCAGAGGAGGACAACATTTCCAGCGGACGCTCCAGCGTTAGTTCTTCTGATGGCTCTTTTTTCACTGATGCCGATTTTGCCCAGGCGGTCGCAGCAGCAGCGGAGTATGCTGGTCTGAAAGTGGCCCGGCGCCAAATGCAGGATGCTGCTGGCCGCCGCCATTTTCATGCATCCCAGTGCCCTAGACCCACAAGTCCTGTTTCTACAGACAGCAACGTGAGTGCTGCTGTAGTACAGAAGGCCAGACCAGCCAAGAAACAAAAACACCAGCCAGGACATCTGCGCAGAGAAGCCTACACAGATGATCTTCCACCTCCCCCTGTGCCACCACCTGCTATCAAGTCACCCACTGCCCAGTCCAAGGCCCAGCTGGAGGTTCGACCCGTGATGGTGCCAAAACTCCCTTCTATAGAAGCAAGAACAGACAGATCATCAGATAGGAAAGGAGGCAATTACAAGGGGAGAGAAGTATTGGATGGAAGACAAGTTGCTGATATGCGACCAAATCCAGGTGATGCCAGAGAAGCACAGGAACAGCCAAATGACGGGAAAGGACGAGGAAACAAGGCAGCAAAACGAGACCTTCCACCAGCAAAGGCTCATCTCATCCAAGAGGATATTCTGCCTTACTGTAGACCTACTTTTCCGACATCAAATAATCCCAGAGATCCTAGTTCTTCAAGTTCTATGTCATCAAGAGGATCAGGAAGCAGACAAAGAGAACAAGCAAATGTAGGTCGAAGAAATATTGCAGAGATGCAAGTTCTTGGAGGATATGAAAGAGAAGATAATAATGAAGAATTAGAGGAAACTGAAAGCTGAAGACAACCAGAGAGGATTATGAGATCTAATGTGAAAGTTATCACTCAAGATGCCTTGTGTCAGATGACATAAGACGCCAGATAAAATGTTCAGTGCAATCAGAGTGTACAAATTGTTGTTTTCATTCCTCTTATTGGAGTACCATTTTTTAAATTTTACTGGGGTTTTATCATTGTTATTTGATCCCTATCCCTAGGAAGAACCTCCCTATTCCCCTCGCTGTTGGAACAAATCATTTCACCTTGCTTCCGGCAAGGGAAGTATTTGACTTCTTGCTTCAGTCATCAGCCAACAGGAGAGAACAAAACAGTTCTTTTGCATTTTGCCCCTGAGATATGGCATTGCACTGCTTATATACCAAGCCAATTTACTGATCAAAGATGCAGAGTTGACTAATCAACTTCATGTCAAGGGCTCTAAAGATATAATCTTTCTATAACCAACTGCTAATGCAAACTAAAACATAACTTCATTTTAACATGATTTTAAAATCAGTCTTTCATACCACCCTCTGCAGGGAGAAAAAAAAAAAAGCAAATGCAGGACAACCATAATCAATTTGAAAGGGGTAGAAACATTGTAAATATATACTCTTCGCAACCCCTGGTGGTACTTTATTTTGTCTTCATTTCGATCGCTGAAGTATATTGTTATCAGAAACTTACTTTTGGATAAGTAGGGGTAAGCCAGTTGGATCTCTGGTTGTCTAGTCATTGTCATAAGTCAGCCCAGCAAAAACCTTGTTCTATTTTTCAATCAAAAAGCAATTATAAATGCATATTACCAACAAACGGATGTTTTTAATGACCAATCGAATAAGGACATCCCCATCTCAACTGGCCTGAATTTCTTCTGGTAGTGTCAGTTCAACTTTCGGAAGTGCCACTTAAGGAAGTTTGATTTTTGTTTTTGTAATGCACTGTTTTTAATCTTTTTTTTTTTTTTGGTTTTAAAAGCACAATCACTAAACTTTATTTGTAAACCATTGTAACTATTAACCTTTTTTGTCTTATTGAAAAAAAATGTTGAGAAGCGTTTTTAACCTGTTTTGTTAATGCTCTATGTTTGTATTTGGAATATTTGAATGATGACAGATGGTGAAGTAACGTGCATACTTTATTGTGGGCCATGAATGCAACGGTTCTTACTTTTCCTGGACTGAAAGAAAAAAAGGTTTAAGTTTGTTATGGCCATTGGTTAAGCTTAGAAGATTTCCTTATAAGCTCAAATGGAGGCATTACTTGCTTTGAATTGCCAAATGATGTCCTCTGACTGTAGATTTTTATGACCCTTTTTTTTCGTTATATAAATTTCATTAACTTTATAATTGGTGCTATTTGAAGAAAAAAAGTACATTTATTCATTTATAGGTATCAGTCCTGACCCACCCCCCTAGCCCTGCCATCCCCACAGAAAACAAAGCCAAACAAAACTGAACCACAAAAAAAAAAAAAAAGCTGGTGTTCACCAAAAACTAAATGTGTTCACTTAGATAATTTGAAATTTACATAGAAAAGGTGTGCAGTACTAAGGGAACAATCCATGTGATTAATGTTTTCATTATGTTCATGTAAGAAGCCTCTTATTTTTAGCCATAATTTTGCATACTGAAAATCCAATAATCAGAAAAGTAATTTTGTCACATTATTTATTAAAAATGTTCTCAAATACATC EMBV3_22271 TTAACCTGGTCTATGAAAATCTCTAGGATGAGCTCTGCCTGCCCACAGATCTTGCCCTGG Gene GeneID:512151|NFAM1:XM_002687969:92_cdna Constitutive 0 NULL GeneID:512151 5 GENE NFAM1 NULL NFAT activating protein with ITAM motif 1 EMBV3_23004 GGTGATGGTTGGGAATGGAGAGCTTCAAAGGAGGCTTTAGATCCCCCCCTGGATGATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38455 GGCTGAAGTTCCTGCTGTAAAGGACATGTTGGAAGCTGGTGTCCTAGATACTTACCTGGG Gene GeneID:613956|LOC613956:XM_002688766:85_cdna Constitutive 0 NULL GeneID:613956 7 GENE LOC613956 NULL similar to Chaperonin containing TCP1, subunit 8 (theta) EMBV3_02064 AGTTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGATGGGACTCACAAGCTAACCC Gene GeneID:100295687|LOC100295687:XM_002686151:276_cdna Constitutive 0 NULL GeneID:100295687 3 GENE LOC100295687 NULL similar to glutathione S-transferase mu 7 EMBV3_34982 AGTGTGTCAGATTCACCAGCTGCTCAGCCCAGCAAGAACCAAGTCCTGGGAAGGAATGAG Gene BVT0102_365584 - 1 EMBV3_18494 GK000016.2:29840791-29873659 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33229 TGGATATTGACCAACTGTGAACCCCTCAGCCTGCCCTCTCTGACCTAGAATGGGTCTAAG Gene BVT0102_140107 - 1 EMBV3_22555 GK000004.2:25161438-25213087 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181037 TCONS_00181038 TCONS_00181036 1 XLOC_110527 Coding TCONS_00181037 XLOC_110527 NonCoding Coding - 4:25163814-25167482 - TSS135619 807 1 TCONS_00181037_1 56 0.480793060718711 3 0.780747204799564 0.00177475851783122 0.00325465880117325 0.000416684093820344 5.34671170685321e-09 1.83769861829213e-06 0.000348029287970613 1.33252758561664e-15 4.25316759723276e-06 6.52833330965878e-06 0 0 0 2.12956696130231e-06 1.32139412896218e-13 1.57050594915877e-06 0 0 8.54136638057545e-06 0.000826389460079504 2.64872579915928e-06 1.2040577117727e-06 3.69969458441741e-06 7.4183706525235e-166 0 0.000201660127837896 4.44178744527769e-05 0.000228705181897284 3.13141262292034e-06 7.82031664824814e-05 3.75675992300313e-119 XR_237496.1 LOC101903614 PREDICTED: Bos taurus uncharacterized LOC101903614 (LOC101903614), 4e-18 96.9 71.18 0.280049566294919 NM_207359.2 GADL1 Homo sapiens glutamate decarboxylase-like 1 (GADL1), mRNA. 4e-11 73.4 76.07 0.14002478314746 0 noncoding 1 1 1 1 -0.0911217619058324 0.593806344592133 0.00842515874501588 0.857553628774691 CTGGTAACTGATGAGCACACCTGATGTCAGTTCCCTTGTAACTGGTAACCTCCCTTTGCCCCTGCTACCAAAGACTGCACGTCTTGCCCTGGTGTCTTTGCTGCTGTCTATCGACTTGATGGGGTGTTGCTCCAGGATCCTGCTTCAGATAAATAAGCTCCCCCATCCATTAAAACATTAATGTCCCTGTTGCTGCCTTAGAGCTCTTTCTTCAGTCTTGAGGCTGGGTGTGGCGCAAGGTCTGAGGACAACTTCTCAGTGATCCTTGAAACACCTGACACCAGTCAGGACCACACTGACAGCCACAGAGCCAGATGGTTACCAAAGTCCACTCCTGTGCAGCCATCTGCAGTCCGCTAGATCTTCAGTAAAGGAGTAGCAAAAATACTTTCTCATGAGGATTGTCTAACCAGGCTCTATCTGCACCAGTACATTGTGGATATTGACCAACTGTGAACCCCTCAGCCTGCCCTCTCTGACCTAGAATGGGTCTAAGAGAGGGAAGCTCTAACTGGACTTGATTACTGGTTTTCAAACTTTATCTGAAAACCATCTGGATCACATGGCAGAGTGAGAGTCGCTCAAAATCTCATGGAGGCCTTGTTAATTATGGGTCGTAAACAACAGCTCCAGAGTCTCTGACGCAGTACACCTGGGGTAAGACCTGAGGATTTGCATTTTCTAACAAGTTCCCAGGTCATGCTGTTCCTGCTGAACCCGTGACCACATGTTGAGAACCACTGGGCTAGCTAATCTGTAAACCCTTAGGAATAGGCATGTTGAAGCAACCCAACCTCACAGAATGGG TCONS_00181035 TCONS_00181035 s 5' 0 TCONS_00181035 TCONS_00181035 s 5' 0 EMBV3_21380 CGCTGGAGGCGGCTGTGGCGGCCGCGACTGGCTCTCGAACGGTTTGGCCTGATGAAACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40582 GAGAAAGAGGAGGATATTGCTGTATTGGCAGAGGAGAAAATTGAGCTTTTGTGCCAGGAC Gene GeneID:618860|WDR48:NM_001076524:235_cdna UTR3_Alt 2 NULL GeneID:618860 22 GENE WDR48 NULL WD repeat domain 48 EMBV3_02265 TTGGGGACGGAAGGCCATTCCTGAGGTCAGGTCCTGAGAGCCCCTCGCCATGAGTACCTC Variant GeneID:507595|C17H12ORF65:XM_002694475:311_cdna 97^146 1 EMBV3_18917 GeneID:507595 17 GENE C17H12ORF65 NULL chromosome 12 open reading frame 65 ortholog EMBV3_13458 CACGTGGAGGTGAAGGACCCTGAAGGCAAGTATCGTGAAGAGCGCTTCCGTCTGATCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22550 CTGGATTCCTTGGCTCGTTCATTCAGTTGTGTGCCTTACTTCAGCTCCACTTCTGTGGAC Gene GeneID:785866|LOC785866:XM_002693807:42_cdna Constitutive 0 NULL GeneID:785866 15 GENE LOC785866 NULL similar to olfactory receptor 1440 EMBV3_35425 GACCACTTTTTCTGTGAGGTTCCTGCCCTTCTCAAGTTGTCCTGTGCTGACACAAAGCCT Gene GeneID:784652|LOC784652:XM_002697438:22_cdna Constitutive 0 NULL GeneID:784652 23 GENE LOC784652 NULL similar to Olfactory receptor 2B3 (Olfactory receptor OR6-14) (Olfactory receptor 6-4) (OR6-4) (Hs6M1-1) EMBV3_27619 GTACATTCCACCAAGCCTCAGACAGATGGAGGAAGGACCTGAGTTCTGGGCAAAACTTCA Gene GeneID:614548|GADL1:NM_001102281:214_cdna UTR3_Alt 2 NULL GeneID:614548 22 GENE GADL1 MGC157360 glutamate decarboxylase-like 1 EMBV3_19169 GATGCGTGAGATCTGAGATGCCTCCCCCAGAGCAGATACACAACTTAAGGGCACCTTAGG Gene GeneID:613651|SPSB2:NM_001076280:67_cdna Constitutive 0 NULL GeneID:613651 5 GENE SPSB2 MGC138118 splA/ryanodine receptor domain and SOCS box containing 2 EMBV3_35192 CCCACATACCCTCGACAAAAACATCCTCACTCTGCTGCTGTAGATGGCCACCAGCTTTCA Gene GeneID:534591|KCNN4:NM_001076905:322_cdna Constitutive 0 NULL GeneID:534591 18 GENE KCNN4 MGC142940 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 EMBV3_30078 CTCCAGGGGCAGCCAAGAGTTTTACCCCAAGTGGCGGGAATCCAAGCTGTTTATCAGTGA Gene GeneID:613605|KCNQ5:XM_002690016:51_cdna Constitutive 0 NULL GeneID:613605 9 GENE KCNQ5 NULL potassium voltage-gated channel, KQT-like subfamily, member 5 EMBV3_39276 GACCCTGCTGCGACTCAGCGGAGTGCGACGTCTCTAGATGACACTGAGCTCCAGCTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38025 GGAAAGCAATGATGATCTAATTTTACCATTTCCCAGCCCCATCCCTGCCATGTATACCTC Gene GeneID:512445|ZNF187:NM_001101957:13_cdna UTR3_Alt 3 NULL GeneID:512445 23 GENE ZNF187 MGC151668 zinc finger protein 187 EMBV3_33569 AGCAGGCTGCACCTACCCATTTCTTCGTTTACTCTTGAAGTGTCCTATCTCTGGGGCCAA Gene GeneID:615476|KLHL17:XM_002694138:511_cdna Constitutive 0 NULL GeneID:615476 16 GENE KLHL17 NULL kelch-like 17 (Drosophila) EMBV3_33771 GTCTTGATTCTTACCTAAGGCACTGAAATGCTACAGGAAAAAAAAAAGCAAAAACTAATC Gene GeneID:282009|PRSS7:NM_174439:1_cdna Constitutive 0 NULL GeneID:282009 1 GENE PRSS7 NULL protease, serine, 7 (enterokinase) EMBV3_43768 GACTGGGAGAACCGGGAAGTTTCCACAGGGGTCGTACATTGCCAATCGAGTGACTGACAA Variant GeneID:510069|PSMB6:NM_001034369:66_cdna 114^181 1 EMBV3_21303 GeneID:510069 19 GENE PSMB6 MGC128291 proteasome (prosome, macropain) subunit, beta type, 6 EMBV3_38323 TGGAACTGAATCTGATACTAAACACAGAACCAGAGATTATAAGAGGACCAGTCTAGCTCC Gene GeneID:506240|PRIM1:XM_002687574:625_cdna Constitutive 0 NULL GeneID:506240 5 GENE PRIM1 NULL primase, DNA, polypeptide 1 (49kDa) EMBV3_28974 TGACGAGGACATCCACCCACAGTTCAGAAGATTCCAAGATGAACCTGAATGATTTTATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18983 TCGTGGGGAGAGGGATGCTATTTATTCAGTTTGGGACAGGAGGACGAGTACTTCCACCCT Gene GeneID:538671|SUPT6H:XM_002695748:449_cdna Constitutive 1 NULL GeneID:538671 19 GENE SUPT6H NULL suppressor of Ty 6 homolog (S. cerevisiae) EMBV3_24103 GACAACATCTACCTTATTGGCCATGTGGCTGCATAAAAGCACAACTGCTGGGACTTCAGC Gene GeneID:538528|FBXO8:NM_001015667:35_cdna Constitutive 0 NULL GeneID:538528 8 GENE FBXO8 NULL F-box protein 8 EMBV3_25122 CCAAGAAGAAACAGTTAGACAGCTGCTTTTACACCCCTTTCCGACCTCTTGGATGGAGGC Gene BVT0102_073457 + 0 NULL GK000028.2:15136824-15428465 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160180 TCONS_00160179 TCONS_00160176 TCONS_00160178 TCONS_00160177 1 XLOC_097603 NonCoding TCONS_00160177 XLOC_097603 NonCoding NonCoding - 28:15305069-15422977 - TSS119867 1511 2 TCONS_00160177_2 90 0.0628722700198544 5 0.987227221454197 0.000532808377270157 0.00108844882706746 0.000256711235629916 1.4675746614256e-05 0.00139151007548869 1.11103570895748e-25 0.000248203994351074 0.00232267097031447 4.77170758365237e-07 9.95324675934894e-87 4.9136857243481e-06 3.51961906846779e-285 8.33586075915802e-06 1.35839658828822e-08 9.9265081799699e-05 4.24424198938956e-71 0 3.6172785375233e-17 0.000163929228148763 0.00118567402215808 1.26340443610113e-05 0 3.9931592717687e-05 0 0.00063110759607528 1.09856095507336e-37 5.28980884160457e-05 5.15202984398038e-05 1.60458721547569e-05 0.000114911952430065 XR_226519.1 LOC101902045 PREDICTED: Bos taurus uncharacterized LOC101902045 (LOC101902045), 0.0 765 100.00 0.27994705493051 0 noncoding 1 0 1 0 -1.0734415422031 0.00190874667225691 -0.0691591115469108 0.197738282153206 AGGGAGGGATGGGTCTTCGTTACCTCAGCCTACAGCCCACCATGAAATTTCTCAGGAAGATCTTGTTTCAGGACCTGGAGCCTCCCAGTCTTTCCAGAAAGACCTGAAGATTGAAGACCTCTGGGTTGTTTCTAGGCAAGAGGAAGATTCTTTTTAGCTGGGCTTCTTCAGGAAGTTCAAGATATTGATAGATTTTCTCTGTGGGTCATTGACTTTGCCTTAGGAGGAGTTGCCTCACCCCACCTTCAGGGGATCTTCAGGAAGGGCGTGGGCTCTGGGTAACAGCAGAGACAGTGGCTCAGCGCCTAGTGAGCTAGGACTGGTCTGTGAGTAGGCGCATCCTCCCAGGGCATCTGCTGAAACTCTGATGGCAGTGGTAACTCCCCAGGTCCTGCTGACATCCCTCTATAAAGAGATGATTTCCCCTTGTCAAATTATCAACTTCCTCAAGGAGCAGCAGATACAAGAAAGGTTTGTTTTAACACAGACTACATGGGATACACACAGGAGCATGTGGCTGCCAATGAATATGGGGCTTCTGGCCTGTCAGATAAAACAGGCCTGGCCATTTCAGCAACACAAAGGATCGGACTGTGACAGCAGGCAGCTGCATGGACACATCTCTAGTGCCTTCTGCTGAGTGAAAGAGGCCACACACAAACGAATGAGAAATGGAGGTGTCTCTGAGAGGATAAGTGGCTTGTCTGAGATTTCTCCGTTGGAAGCTGACTCTAGACCTGAGATTAATGAACTATTCTTGGGAACACAGGCCTTGTGAATTCTACTCTGTTGCCATGTCTTTGAGCTCAGTAGGATCTTACTCAACATACCAAGAAGAAACAGTTAGACAGCTGCTTTTACACCCCTTTCCGACCTCTTGGATGGAGGCCACCTGCCTTTCAGCATCCTCCCCTGCACACCCCTAAGCCCAGTTGCCTGCCAGAATTTCAGCCTTTAGGAAGTGACTTGCAGGAGAATTCTACAAGTTAAGAATTCTCCTACAAGGTTGTATTGTTATTTGGAAAGTGAAGTGATGAGCAGACTAATTGTCATGACGGATTTGGAAATTGGCATCAAGGTTTTGTTGAAGAGAATGTGGAGTCAACATAATGCTTGTCAAAATTGCCTTTCTCTAATAACAAGCAATATGTGCTTCTGGGTTTCTGAGAACACTGCAAATTATTTCCTTCTTTTTGAGGTACAAGTTAAAATGTTCATCTTGGTTTGCTGCATGTTATTAAAAAGTGTGTTATCTGGGTGATGAGTCTGTAAGTAATGAAGGATCATTTGAACCATGAGAAAAGCCACAGAAATGGAGACAAACTGGTATCAGTGGGACACTAATGAGGTAGAAATAAGTATATCTGAGGTCAGGAAAGCCAAAGGCATACTTTTCCAGTAGCTTTCCTGTGCTCTCCGGTACCTGGTCATGGTACTGAACTTTGCATTTCTATAATAACTATCAGCTTTCAAGATTCTTGAGACTTCCTCAAGGAGAGGAAGGGGTGAAT TCONS_00160190 s 3' 122550 TCONS_00160190 s 3' 5489 EMBV3_28402 CCTGCCTGATGCTACTGTCTCAGGTCCAAGATTGCCTGCCAGAGGAGACACTCGGGACAC Variant GeneID:513652|REG3G:NM_001024534:71_cdna 157^266 1 EMBV3_05469 GeneID:513652 11 GENE REG3G REG3A regenerating islet-derived 3 gamma EMBV3_17774 GACAAGAGTATTCACTTCACTACTTCTATTCATTACAGTACTGGAAATTAGAGCCAGGGC Gene BVT0102_122630 - 1 EMBV3_25200 GK000027.2:22395556-22499289 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33198 AGGGGGACTGAAATGCAGAAAGACTTTATCTGGGAAATGAGGATGGGGCAGCTAGCACTC Gene BVT0102_168451 + 0 NULL GK000019.2:27459090-27459400 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096094 TCONS_00093012 TCONS_00096095 2 XLOC_057879 XLOC_057048 Coding TCONS_00093012 XLOC_057048 Coding Coding SLC16A13 19:27455457-27459909 j TSS69876 2444 1 TCONS_00093012_3 426 5 0.452033250954842 0.00321116191888614 0.00198705113094458 0.00306126233837462 0.00282357579788818 0.00262033200882768 0.00143091739573678 0.00197228220894983 0.00280519278509639 0.00329532067983305 0.000270248892589438 8.38136367558136e-06 2.88344457832266e-07 0.000457938111864696 0.000132191144855113 0.000128517814089938 0.000472241173771297 1.4811479807402e-09 0.0087508001231928 0.00434991229446038 0.00642736909455794 0.00238144132377905 6.46183264254614e-05 6.23881660094932e-05 5.23641814963495e-15 0.00631635667935858 0.00678475797280883 0.00411845470893708 6.71374413234993e-05 8.13769708844404e-06 1.58433251259149e-05 NM_001076132.1 SLC16A13 Bos taurus solute carrier family 16, member 13 (monocarboxylic acid transporter 13) (SLC16A13), mRNA. 0.0 3656 99.95 0.830196399345336 NM_201566.2 SLC16A13 Homo sapiens solute carrier family 16, member 13 (SLC16A13), mRNA. 0.0 1795 84.84 0.651800327332242 TCONS_00093012_3 sp|Q17QR6|MOT13_BOVIN MOT13_BOVIN Monocarboxylate transporter 13; 0.0 829 100.00 0.997652582159624 2 coding 0 0 0 0 -4.59026354001312 0.00658293689721674 -0.0223800451478608 0.676023569961433 GCTGAACGTCGGGGCCAGCGCGGGCCTGATCTCCCCATTATAATCGCCCCCAATAGGGGAGAAGCGCAGGCGTCTCACGCAGCCTCTCTGCAGCTTTCAAGCCCTCGTTGGTACTTTCCTCTCTGCCACCCTCGCTTCTCCGGCGCGGCCCCGAGCTGTCCGGCCGGGTGGGTGGGCAGAGGTGGAACGACCAGAGCTCCGCTCCGGAAGGGGCTTAGAGGCAGCACTGTTACCACCCAGATGGCTTATAGGGCCGAGCCCCCCGACGGGGGCTGGGGATGGATGGTGGTACTCTCAGCGTTCTTCCAGTCGGCGCTGGTGTTCGGGGTGCTCCGTTCCTTCGGCGTCTTCTTTGTGGAATTTGTGGCGGCGTTTGAAGAGCCGGCCGCGCGAGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGTCCAGTGGGCAGTGCGCTGAGCACGAAGTTCGGTCCCAGGCCTGCGGTGATGACCGGGGGTATCCTGACTGCACTGGGGATGCTGCTTGCCTCCTTTGCTACCTCCTTAACCCACCTGTACCTGAGTATTGGGTTGCTCTCAGGATCTGGCTGGGCCTTGACCTTCACTCCAACCCTGGCCTGCCTGTCCCGTTACTTCTCTCGCCGGCGATCCCTGGCCATGGGGCTGGCACTGACGGGCGTGGGCCTCTCCTCCTTTGCTTTTGCCCCACTCTTCCAATGGCTGCTCAACCACTATGCCTGGCGGGGAGCCCTACTGCTGGTGTCGGCCCTCTCCCTTCACTTGGTGGCCTGCGGTGCTCTTCTCCGTCCACTTTCCCTGGCTGAGGACCCTGTTGTGGGTGGCCCTGGGGCCCAGATCACCTCCCTCCTGCGTCACGGCCCCTTCCTCCGTTACACCGTTGCCCTCACCCTGATCAACACTGGCTACTTCATTCCCTACGTGCACCTGGTGGCCCATCTTCGGGACCTGGGTTGGGACCCACTGCCAGCTGCCTTCCTCCTCTCGGTGGCGGCTATTTCTGACCTTGTGGGGCGTGTGGCTTCTGGGTGGCTAGGCGATGCTGTCCCAGGGCCTGTGGCAAGACTCCTGATGCTCTGGACCACCCTGACTGGGGTGATACTGGCCCTGTACCCTGTGGCTGAGGCGCCCACTGGCTTGGTGGCCCTGACTATGGCCTACGGCTTCACATCAGGGGCCCTGACCCCAGTGGCCTTCTCCGTGCTGCCTGAACTGGTGGGGACTGGAAAGATATACTGTGGCCTGGGACTGGTACAGATGGTAGAAAGCATCGGGGGGCTGCTGGGGGCTCCTCTGTCAGGTTACCTCCGGGATGTGACAGGCAACTACACAGCTTCTTTTGTGGTAGCTGGGGCCTTCCTTCTGGCAGGAAGTGGAGTTCTCATCACTTTGCCCCACTTCTTCTGCTTCTCAGCTCCTACCTCCAAGCCCCAGGATCTTGTAACAGAGGCACTGGATACCAAAGTCCCCCTGCCTGAGGAGGGGCTGGGAGAGGATTGAACTCCAAGAAGGGGCAGACAGACCCATAAAACAAGAGGTTGGTGGCTCCAGGTCTTCTCCTGCCCCATCTTGGCACCCACAGAACCACAATGCCTTAAGCATCTTGATCTGCTCCCCTTGCCCGCCCCTCAGAGCAGGCGTGGGGCTCCTGCAATGTGTGTGCCAACCCTTTGTATTTTCTCGAGGATTCTTGTCTGTTTGCTCCCACAACCTTTTCTGAAGGATCCAGGAGTTCAGCCTGCTCCACTGAGCTGTGAATCAACTGTGGAAAATCAAAGGCCAAGATACTTATCAAATTTTTTTTACATGTGATCTCCAGTGTTGCCCTCCTTGGAAAAAAATCTGTCTTTGGGGTAAAACTGAATAAGAAAACTGGACAAAGTTCAGAACCTCAGAAAGTGCTTGGGCCCATAAGCCTGAGTGAGCTGAATGGAGTCACATTGGGGAGTGGAGGGGAGGTATCCAGGACCTCTGGTGACCCAGAGCATTTAACCCTGGACTCTGCTCTCTGGACCACAGTTCCTCCCACTTGCCCATGGACTTCCCTCTTTCCTACTTTCCCCTATAACTTAGAAATTAAGAAAATGGTGTGAGATGTGGGAGAGGGGTGCTAGTTTGGAAGAGAGAGATAAAGCTAAGAGAGCAGAAGTCTGAGATGCTTGTATTTTCCTCAGGCCAGTAAAGGGGGACTGAAATGCAGAAAGACTTTATCTGGGAAATGAGGATGGGGCAGCTAGCACTCAAGAGCACCCCCGTGCCCCCAACAAACCTGAAGCAGACAAACAGGCAGTTCCTGGAAGGTTTCCTGTTATAATGGCAAGCACTTGGGCAAAGAGAAATGGACTGACAGGACAAACATTTCCGATGCCCACTAGCTCCGGGAGCACACAGAAAGTCAACGGGGCGAAACTTCCGGCGCTCAG EMBV3_12915 GTAAGGTAAAACCCGTCTCTTGTGTCTCGGTGTTTGTGAAGGGTGGAGCCCTCCTGAACA Gene BVT0102_022176 - 1 EMBV3_09264 GK000006.2:108222168-108307671 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210763 1 XLOC_129273 NonCoding TCONS_00210763 XLOC_129273 NonCoding NonCoding - 6:108287567-108288316 - TSS158270 749 1 TCONS_00210763_2 176 1 0 0.00116256903191635 0 0.000247102985937975 0 0 4.77577519028482e-06 0 0 0 0 0 0 0 0 0 0.00179838656653818 0 0.000770482408517788 0 0 0 0.000267501237903138 0 0 0 5.64390048439746e-05 5.47584510063972e-05 0.000115415759537674 9.72217077049667e-05 0.000128433007334555 0 noncoding 0 0 0 0 0.12404454585652 0.346384138624485 0.0194332597358783 0.69535287768554 GAGCCCGCGTTCTGACCCGCCGGGAACGGCTCTGTGACCTTGGCCCGATTCGAATCCGCTTCCTCCACCGTTGGCCCTGTGACCTTGGGCCGGGGCCCTCGCCTGAGTCCAGGTGACTCAGTGGGAGTCGAAGGACCCGTCTCGGGGGCTGGGCGCGCGTTTCCGGACGGAGAGCGCTGGGTCTGGCTGCCGGCTGGTCAGGGGCCTCCCGCCCCGGGCGATGGGGCCGCCGCGAGCCTTCAGACCTGGCCGCTCGCTTAGAATCGCTGGGCTGGAGGCGCCCTTCCCACCTCGTCGTCTTCCTGCTGCCCCTTTGCAGCCACCGCCCGGGGACCCGGTACCTTGCGACCCTGCGCTGTCGCAGGGCGGTCCAGCCGCTCCTCACGACCTCGGATGCACCCGCCGAACAGGCCACGAACCCCGTCAGGCCCTCCCCGGCCCTGCAGTGGGGCCACTCCGCCGGGACCCTCCTACCTGGGCCGCTTGCCCGTCATCGGGAAGCCCCAGGTACAAGTCTGCCCTCAGCCCCGTACCACAGAGATCCCTCGTCGGGCCCCGTGTTCAGGAGGGCTCCACCCTTCACAAACACCGAGACACAAGAGACGGGTTTTACCTTACTTGGCTCCATGGCTGGTTACAGGGCCGAGATGCAGAGGACCTTGGCGCTAGAGTGTATGGTACAAGGGCCTTCATTTGCATTTCTTCCTGGGCCCCACAACCTTCATCTCTGCTGTCAGGACCCACCGCCT TCONS_00206185 TCONS_00206186 . 5' 562 TCONS_00206185 TCONS_00206186 . 5' 562 EMBV3_03622 CCTGGAGTGGGTGGAAATTGGGTGAAGGGAAAGGCAGGTGAGAAAACGTGTCAAATAACC Gene GeneID:540052|MUSK:XM_002689922:14_cdna Constitutive 0 NULL GeneID:540052 8 GENE MUSK NULL muscle, skeletal, receptor tyrosine kinase EMBV3_23694 CAGAGAGGAGATAGAGATTGTCTGCAAATCCAGAGGCAATAATCAAAGCAGGGCGGAGGG Gene GeneID:100337235|LOC100337235:XM_002695933:341_cdna Constitutive 0 NULL GeneID:100337235 19 GENE LOC100337235 NULL NME1-NME2 protein-like EMBV3_05907 AACAAGTACAGCGCTCAGGGCGAGCGCCAGGATCTTAATTCATATCTTGAAGATAAAGTC Variant GeneID:617105|EEF1E1:NM_001040599:8_cdna 96^296 2 EMBV3_36220 GeneID:617105 23 GENE EEF1E1 MGC128552 eukaryotic translation elongation factor 1 epsilon 1 EMBV3_14508 CACGTGAATCCACTCCGCAAGGTTCACACAATCGCCAGAAAGCCCATGTCTTGGCATGAT Gene GeneID:782130|MGC151969:NM_001110092:331_cdna Constitutive 0 NULL GeneID:782130 3 GENE MGC151969 NULL Uncharacterized protein ENSP00000334415 homolog EMBV3_03523 AATGAAAGAGAGAGAAAAAGGATGAGAGACCAAGCAACCCAGCGAATCCAGGTGGCCAGG Gene GeneID:539749|SIX6:NM_001104993:193_cdna Constitutive 0 NULL GeneID:539749 10 GENE SIX6 NULL SIX homeobox 6 EMBV3_29391 TCTTTGAGTCCTTTGGGGACTTGTCCTCTGCCGATGCCATTTTGGGAAACCCTAAGGTGA Gene GeneID:100337028|LOC100337028:XM_002693225:457_cdna Constitutive 0 NULL GeneID:100337028 15 GENE LOC100337028 NULL hemoglobin fetal subunit beta-like EMBV3_39763 CTTCTGGATTCTCTTTTATGTTCCCAAATGGGTCTACTCAGTGGGCATCTCCCACCTGCC Gene GeneID:536606|LOC536606:XM_002696199:228_cdna Constitutive 0 NULL GeneID:536606 19 GENE LOC536606 NULL hypothetical LOC536606 EMBV3_36767 AAGGGAGGTTGAAAACAAAAAAGAGATTGACTGTCTCCGCCTTTGTGACCCTGAGCACAG Gene GeneID:431786|PEBP1:NM_001033623:48_cdna Constitutive 0 NULL GeneID:431786 17 GENE PEBP1 PBP PEBP phosphatidylethanolamine binding protein EMBV3_05510 AGTAGCTCTGGTGTCCTGAGTTTGGTATGAGGCATGTGGACTAGAGCGGTTAGGTTTGAC Gene BVT0102_004905 + 1 EMBV3_18101 GK000007.2:16595368-16617733 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212082 1 XLOC_130077 Coding TCONS_00212082 XLOC_130077 Coding Coding C7H19orf52 7:16593453-16596822 = TSS159226 3294 1 TCONS_00212082_2 260 0.267152398299939 2 0.0225653206650831 0.000100356518274064 6.72547179546136e-06 4.95289774442658e-05 1.10799162834607e-05 1.31960871229949e-05 2.16773178007933e-11 0.000598258710140684 0.000182365163357131 7.87464153741218e-05 5.49934375458045e-06 3.50380333417175e-05 2.38966227497938e-05 4.60306091107716e-05 1.5899864595454e-05 2.04753085981912e-05 0.000192238531653641 1.09354471222536e-05 4.00020833749294e-10 0.000157957129194222 2.13658631494049e-05 9.78218199523019e-05 5.10128060095505e-06 2.41029216481228e-05 8.10286653129226e-05 4.14858740130682e-05 3.33413390024097e-05 9.78766008998764e-05 1.92771690744495e-05 3.51548622154957e-06 8.02861770958111e-06 NM_001099699.1 C7H19orf52 Bos taurus chromosome 7 open reading frame, human C19orf52 (C7H19orf52), mRNA. 0.0 2578 99.25 0.443230115361263 NM_138358.2 C19orf52 Homo sapiens chromosome 19 open reading frame 52 (C19orf52), mRNA. 0.0 942 79.02 0.337887067395264 TCONS_00212082_2 sp|Q9BSF4|CS052_HUMAN CS052_HUMAN Uncharacterized protein C19orf52; 1e-158 446 85.77 0.996153846153846 1 coding 0 0 0 0 -0.0428387246160104 0.784541311030922 0.0257161910820919 0.673179713259908 CTTCGGAGTGCGGACGCCCAGCCGGAAGACAATGGCGGCTGCCGCTCTGAAGAGATTTTGGTCCCGAAGCCGTAGAGAGGCGCGTGACGCTGCAGCCGCAAAGCCCGGCGTGTGGGCGCGGTTGGGCGCTTGGGCCCGCTCGCTGCTCCAAGATTACGCAGAGGCCTGCAAGGACGCGGCGGCGGCGGCGCGGGCCCGGCCCGGGAAGGCGGCCGTGTACTTAGGGCTGCTGGGTGGCGCGGCGGCCTGTTGCTCCCTGGCACCGAGCGAGGCAGCCTTCGAGGAGGCGCTGCTCGACGCGTCGGGGACCCTTCTGCTGCTGGCGCCCGCCACTCGCAACCGCGACTCGGAGGCGTTCGTGCAGCGGCTGCTTTGGCTGCGTGGTCGCGGCTGTCTGCGCCACGTGAGCCTGGGCCTCTTCTCGCTGGTGTACGAGGCGCCCTTCGATGCCCAGGCCAGCCTCTACCAGGCTCGCTGTCGGTACCTGCAGCCCCGCTGGACCGACTTCCCGGACCGGATTCTGGATGTGGGCTTCGTGGGCCGCTGGTGGGTGCTGGGGGCCCGGATGCGCGACTCCGACATCAACGACGACGAGTTCCTGCACCTGCCGGCTCACCTGCGCGTCGTCGGGCCCCACCAGCTGCACTCGGAGGCCAATGAGCGGCTCTTCGACGAGAAATACAAGCCCGTGGTGCTCACCGACGACCAGGTGGACCAGGCGCTGTGGGAGGACCACGTTTTGCAGAAGGAGAAGAAGGACCAGCTCGCCCTGAGCCAGGCTGACTCTCTGCTGCCGTCGGAGGCCGCGAGATGAAACTCAGACCCCCCGGGTCCCCACCGGGCTCCCGGCCCCCGCAGAATGCTGGCCCGGGAATGTGCAGTTCGTGCGTGTGAGTCTCAAACGCAGAGTGGTGGAAGTAAATTATTTGCAACGTTCTCTCCCTGGGTTTTCACAAAATCGGGGGCCTCCCTCTCACCTGTTCGCTGTGAGCAGACGGCTCATTGAGAGCCTCCCTGGTTTAAGAGTTGGGGAGAGCAGAGAAACGTGCCATGTCGTCTTTATCACTGCCAGAGTTGGTAAGAAACTTTAGACGGAAATAAGCCTTTTTCACTGGGCTTTACGGTTCTCCTGACTAGGGTAACTTGCAGATTTTCGTTTTAAAATTTGACCTAAGAGGTTTATTCTCTCTTTCCACGAGGGACATGTATTTTTTAATTCAGTTTGAAGTAATTGTAGTCTCAGAGGAAATTGGAACAATAATCGAGAAATTCTGTGTGAAGGTTCACCCGGCTTCGCACAATTGATAACATTTCACACTGTCCTTATTGTTCCGTTGCTAACTCGAGTGGGACTCTTTTGTGACTCCGTGGATTGGAGCCCACAAGCTTCGTCTGTCTGTGGGATTTCTCAGGCAAGAATACTGGAGTGGGTTGCCATATTCTCTTCAGTAACCTTGAAAATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCATTTTCATGCAATGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGACGGCGGAGCCTGGTGGGTGCCATCTATGGGGTCGCACAGAGTCAGACACGACTGATGCGACTTAGCAGCAGCAGCATGTTAATGTCTATAGCTGGGTTAAAATCATACTTTTAAAACTACTGTTACAAGAGTGAGACTGCCTCTGTCACTGATGGGGTCTATGACTAGTTAATAAATCAGGAGATGAAACAACCATCTTTGTTGTTACATTGTGCTTATCTGTTTTGCTGTTAAGTTTTGGTACTTGGACCTTCCCTTCATACTATAGGGTGCATTGGACACATGGTAATGTTTATATCCTTATTTAGGGGCAGAGGAGCGTCTTTAAGCCAGCATGTCTGTTTTACAAAGGAAAAATTTTGTTATTTTTCCAGAGCTGTGGCAGACTTCATGATTGAAACTAACTCCTCAAACTCATGGTATTATCTTTGACCCTAATAACGTGCTACTAGAAACTACTGAATACTGTTACTAGCCATAAATAAAAGCTAAGTACAGAAATAAGTGAATATAAACAAAAAGCAATGAAAACAAAAGAGAAATGATACTATAAATTGTAATCCTATACCATTATCTGCTGAAGGCTCTGGACCTGAATCCTGTTGTTCAAGAGAAATTAACCAGCATCAGGGACAGGTTTAAGATGCACTGGTATCAAAATGAGACTTGCTCTTTACCATGATCATGAAGTATTTAGAAAAAAGAGACAGACTTTGCTACTGGTCCAGTGGTCAGGACTCCAAGTTTCCACTGCAGGGGGCACAGATTCTATCCCTGGTCAGGGAACTAAGATCCCATGTACCTCAAGGCATGGCCAAAATTATAAAATTTTTGAAAAGTATTAAGAGGATTGCACATCGTCATTGAGTTGGTTATTAAATGACACTCAAAGCCAGGGAGTCCTACCATATTTGCTCCCTGCTCCAGTAGCTCTGGTGTCCTGAGTTTGGTATGAGGCATGTGGACTAGAGCGGTTAGGTTTGACAGGGGCCTGATGTTCATGCTCAGCACCTTAGAGTATACACAAGACCTCCAGAGGACGGTCCAGCTTAAGCTTCGTTAACTGTTCACTGTTAAGCTTCCAGTATCCCTCAGTGCTCAGCCCAGTGTGGGCCCCAGCAAATGTTTATACTAGACATGCCCGTTATAGGTGGGAGTTGCTGTGATCCTACTGGGGAGGGGGAAGCAGACCGGGACTTGGCTTCCCATCCTTTGGCCAGTCCAGAGTAAGAGACCTTCAGATCTCAACCCTGCCCAGGGCATAAATAGCAAAGTAGACATAGTGTCTCCATTTGCATAAGGGCAGTAGAATCTGAGGAAGAAGAAGTGGGTTTTGAGGGAATTCCTGTCAATCCAATGGTTAGGACTCTGAGCTTCCACCTGATGGGAAGAACAGACTCATTGGCAAAGCCCCTGATGCTGGGAAAGATTGAAGGCGGGAGGAGAAGGGGACGACAGAGGATGAGATGGATGGCATCACTGACTCGATGGACATGAGTTTTGAGTAAGCTCCCAGAGTTGGTGATGGACAGGGAGACCTGGCATGCTGCAGTCCATGGGGTCGCAAAGAGTTAGACACGACTGAGCGACTGAACTGAACATAAATTGGCCACAGATTTGCATGTGTCACCTGCATCCTGAACGCCC EMBV3_23258 CTCTTTGAGAGCTGGGACCTTATCTAAAATACCTCTGTGTGCTCCTCTTTGGTGTTGGCA Gene GeneID:508890|LCK:NM_001034334:79_cdna Constitutive 0 NULL GeneID:508890 2 GENE LCK MGC126900 lymphocyte-specific protein tyrosine kinase EMBV3_18294 TGGGCAATGGCCTCCCTCGCAGAAATTAAGCATGTATATTACGTGGGTGCTGATGTCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24879 TTTGTGACCCTACAGACCATAGCCCAGGTTCCTCTGACTATGGGATTCTCCAGGCAAGGA Gene BVT0102_397033 - 1 EMBV3_38104 GK000014.2:49504246-49558046 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051911 TCONS_00051910 1 XLOC_031320 NonCoding TCONS_00051911 XLOC_031320 NonCoding NonCoding - 14:49505778-49531241 - TSS38616 293 0.668941979522184 2 0.988571204147357 0.00018574217929314 0 0.000221083725794054 0 2.2190441249037e-11 0 0 6.05602334704152e-05 0 0 0 0 9.79256967022385e-06 0 0 0 0 0 0.000524142206419324 0 0.000155409456649482 0 0 0 0.000106942095650694 0.000222227557521686 0.000440432089607617 0 0 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 9e-27 123 79.02 0.450511945392491 0 noncoding 1 1 1 1 0.0102693663794529 0.93304696638029 -0.0155919779712147 0.740523310077213 GATCCCTGGTTCAGGAAGATTCCCTGGAGGAGGGCACTGCAGACCTCTCCTTGCCTGGAGAATCCCATAGTCAGAGGAACCTGGGCTATGGTCTGTAGGGTCACAAAGAGTCGGACACAACTGAATTGACTTAGTAAGGCAAAGATCACCAAACTGCCTAGGGGCATTGCAACATAGTAAGATTTGAGATGGATGAAAAATATGCCTCTTCCTCCGTATCCTCTTCCTCCTTCTAATGTTGAAGAATTATTTTGAACTTTGGCTCCTTCTCCAGAAGATCATGTTGAGAATCT TCONS_00051909 s 5' 1356 TCONS_00053476 TCONS_00053477 r 5' 1534 EMBV3_23310 ATTCGTACTGTCTCCACCAAGATGCAATGCGGTTAGCCTGTGCCAGCACTCGTGTCAACA Gene GeneID:782373|LOC782373:XM_002693317:175_cdna Constitutive 0 NULL GeneID:782373 15 GENE LOC782373 NULL similar to olfactory receptor 555 EMBV3_25222 TGGGATAGAAGACCTGGAGTGGGTCTCAGTAACTGCGGTCAAGCTCAAACCATTCCTCAT Gene GeneID:282657|ATP6V1H:NM_174704:14_cdna Constitutive 2 NULL GeneID:282657 14 GENE ATP6V1H MGC128141 SFD ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H EMBV3_01045 GTAGCGGGAAAGCTGGTTCACTCCAAGAAGACCAGTAATCGTGGCCCAGCCCCTCTCGGC Variant GeneID:523694|SEPW1:NM_001163225:274_cdna 480^578 2 EMBV3_26023 GeneID:523694 18 GENE SEPW1 MGC128106 selenoprotein W, 1 EMBV3_43119 GAAGGCGTTAGGGCAGTTTTAATAGATAAAGACCAGAGTCCAAAGTGGAAACCAGCTGAC Gene GeneID:535883|HIBCH:NM_001046413:39_cdna Constitutive 4 NULL GeneID:535883 2 GENE HIBCH MGC137758 3-hydroxyisobutyryl-Coenzyme A hydrolase EMBV3_24278 GCTGGAGTGAGCCCCCCACTTATCACCCAGATGTACGAGTCTGATGGCTCCGTCATGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28668 TCATGATGGGGAGCTGGCCGGAGAAGGGAATAGGGAAGAAATGTAAAGCCTGAAGTGCCT Gene BVV0102_027357 + 0 NULL GK000011.2:95145049-95357469 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25375 AATGAGAATGGTTCTTGGTGTCATTGTTCCTGGTCGTGGCTGTGCCATTCCAAACCGTCC Gene GeneID:282879|HGF:NM_001031751:2_cdna Constitutive 0 NULL GeneID:282879 4 GENE HGF NULL hepatocyte growth factor (hepapoietin A; scatter factor) EMBV3_02127 CAGCTTGGCTCTGGCGCTCTAGGTGTCTTGGTAGGAGGGCTAAAAGGAAACAACGACTTT Gene GeneID:515263|ALDOB:NM_001034485:12_cdna Constitutive 0 NULL GeneID:515263 8 GENE ALDOB MGC127229 aldolase B, fructose-bisphosphate EMBV3_17382 CATGGGCATCATTGTTGGTCTGGTTCTCCTTGTCACTGGAGCTGTGGTGGCTGGATTTGT Gene GeneID:100126048|BOLA-N:NM_001105651:5_cdna Constitutive 0 NULL GeneID:100126048 23 GENE BOLA-N MGC137175 MGC179296 MGC179359 MHC class I antigen EMBV3_21094 GCCATACATTTGGAGATAAGTATCCTGGAGGCAGAACAAAGAAATGTGGGGAAATGCAGG Gene GeneID:532079|ZNF19:NM_001083460:330_cdna Constitutive 0 NULL GeneID:532079 18 GENE ZNF19 MGC155318 zinc finger protein 19 EMBV3_27941 AAGTGCTGCGACCCCAAGAGACCGTTCCCAGGACTCGACGTCCCCTCCTCAAACTATTAA Gene GeneID:541294|PLA2G2F:NM_001102522:263_cdna Constitutive 2 NULL GeneID:541294 2 GENE PLA2G2F MGC159947 phospholipase A2, group IIF EMBV3_07116 GGCTTATGATGGGACCACCTGACATTCAAAACATTCTTCGGGACACCTTCACTTCCCTGG Variant GeneID:497199|CFLAR:NM_001012281:70_cdna 705^836 1 EMBV3_15486 GeneID:497199 2 GENE CFLAR FLIP CASP8 and FADD-like apoptosis regulator EMBV3_02468 TTGGGAGAGCAGAAAAAGTCTGGAGGAGGCACCACAGAAAATGGCAGCTACATGGGGTTT Gene BVV0102_023067 + 0 NULL GK000015.2:22120339-22134724 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15068 GTACCAACTCTTCTGTCATAGTATTTGTGTGTGGTCCCCGTGGACTGTTTACTATCCAAA Gene GeneID:516010|SMAD2:NM_001046218:110_cdna Constitutive 1 NULL GeneID:516010 24 GENE SMAD2 NULL SMAD family member 2 EMBV3_26669 TCCTGGAGAAAACACAAAGCAGTGTAATGTGTGTGGCAAGGATCTTACCCAAAAGTCACA Gene BVT0102_178751 + 0 NULL GK000018.2:58930572-59050674 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084524 TCONS_00084520 TCONS_00087283 TCONS_00084535 TCONS_00084512 TCONS_00084522 TCONS_00084523 TCONS_00084536 TCONS_00084525 TCONS_00084521 3 XLOC_051602 XLOC_052435 XLOC_051607 Coding TCONS_00084520 XLOC_051602 Coding Coding LOC100299712 18:59692598-59751013 j TSS63301 4236 1 TCONS_00084520_3 756 0.0424929178470255 6 0.927585852706543 0.00225996793050057 0.0028991693759684 0.00134395117616117 0.00184556546226405 0.0025038797166807 9.1838812052101e-08 0.00282309060464273 0.00200536999581929 0.00344268884263911 0.00157198762412737 0.000242582862544801 0.000431071742081669 0.000426817738452788 0.000846787267018445 0.000489544169499279 0.0042825716136237 0.00279192693492839 0.00534518801602137 0.00212106984413694 0.0014858944140641 0.00116513475027952 0.00190183662901076 0.00232076343322388 0.0021883485580654 0.00232555074912132 0.00205003752174252 0.00206938006885987 0.000642089411102794 0.000363801309647233 0.000752587571758 XM_002695305.3 LOC100299712 PREDICTED: Bos taurus zinc finger protein 836-like (LOC100299712), 0.0 4855 92.43 0.773371104815864 NM_001102657.1 ZNF836 Homo sapiens zinc finger protein 836 (ZNF836), mRNA. 0.0 1092 70.73 0.546742209631728 TCONS_00084520_3 sp|Q96SE7|ZN347_HUMAN ZN347_HUMAN Zinc finger protein 347; 0.0 827 53.06 0.998677248677249 14 coding 0 0 0 0 -0.473964104925181 0.380210135474142 -0.499447727192542 0.0031308013491615 GCCTGAGGAAGCCCTGAAGTTGAGGAAGAGGAAAGAAAAGGAGTCAGGCATGGCTCTTTCTCAGAAACGACTGACCTCTAAGGATGTGGCCATCGAATTCACTCAGGAGGAGTGGGAATTCCTGGACCCTGCTCAGAGGGCCTTGTACAGGGACGTGATGCTGGAGACCTACAGGAACCTGCTGTCTGTGGATATCTCTCCTACACATGTGATCAAGCATTTACAACCCAAAGCGAACAGTGATAAACGAGAAATATTCCAAACATTGATGCTGGGAAGACCTGAAAGCTGTGAAATCAAACATTTTCATCTTTGGGGAAGTCAGGAAAATACGTGTGACTTTGAGTGTCAGGGGAGAGATGGCAAAAGAAATTACAAAGGAACACCTGTAAGCCTTAATGGAAATGTGCCTGATGGAATAGATTCACATGATGGAAAGGATGCAGGAATCAAGTCCTTTGGAAGGAGGCTTGGATTTAAGTCTCAGGATAAACTGCAGATATTTCAAACTGGTGGGATAATTTCTGAATATAATAAAGTTGAGAGGTCTGTCAACAACAGTTTCTCATTTTCACCACTTCAAAGAATTCCTCCATGTGCCCAAACCAGTGTTTCTAATGTATATGGGAATGACTTTATGAATCCTTCAGTAGTAACGCAAGACCTCAAAGCACACAGGGAAAAACCTTACAAATGTGATGAGTGTGGCAAGGCCTTTCGTGTAAAGTCAATCCTTTTAGGTCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGACCTTTACTCACAGCTCAAACCTCAGGAGACATCAGAAAATTCATACAGGACAGAAATTATTTAAATGTGATATATGTGACAAAGTCTTCAGCCGAAGTGAACAGCTTGCTGGTCATCAGAGCGTTCATTCTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCCTTTCGTGTAAAGTCAATCCTTTTGAGGCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCCTTTACTCACAGCTCAAATCTCAGGAGACATCAGAAAATTCATACAGGACAGAAATTATTTAAATGTGATATATGTGACAAAGTCTTCAGCCGAAGTGAACACCTTGCTGGTCATCAGAGTGTTCATTCTGGAGCGAAACCTTACAAATGTGATGAGTGTGACAAGGCCTTTCGTGTAAAGTCAATCCTTTTAATTCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAGTGTGGCAAGGCCTTTACTCACAGCTCAAATCTCAGGAGACATCAGAAAATTCATACTGCAGAGAAACCTTACAAATGTGATGAGTGTGGCAAAGCCTTTCGTGTAAAGTCAATCCTTTTAAGGCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCCTTTCGTGTAAAGTCAACCCTTTTAAGGCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCCTTTCGTGTAAAGTCAATGCTTTTAAGTCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGGCCTTTCGTGTAAAGGCAATACTTTTCAGGCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCCTTCCGTGTAAAGTCAATGCTTTTAAGTCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCCTTTTGTGTAAAGGCAGTCCTTTTAAGGCATCAGACAGTTCATAGTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAAGGCCTTTCGTGCAAAGTTAATCCTTTTAAGGCATCAGACAATTCATACTGGAGAGAAACCTTACAAATGTGATGAATGTGGCAAGGCCTTTTGTGTAAAGGCAATCCTTTTAAGGCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGTTGAGTGTGGAAAAGTCTTCAGTCAGAAACCACATCTTCGACTTCACTGGAGAATTCATACTGGAGAGAGACCTTTCAGATGTGATGAGTGTGGCAAGTTCTTCAGTCGGAATTCACACCTTACAAGTCATCGCAGAATACATATAGAGAAACCTTTCAAATGTTTTGAGTGTGGAAAATCCTTTACTCAGGTCTCAGCACTGACTAAACATCAGAAAATCCATACATGAGAGAAACGTATGTGAACGTGGTATATGGTAGAAATCTTCAAAGTTCAAAATTCACACCCTACTATTGGTCAGAGAATTCATACTACTGAAAAACCATACAAATATGAATGTGACAACCTCTTAGGCTTCATGAGAAAATTCATACTGGATAGAAGCCAGATATATATGTATTTATTAGGTCTCTAGAACATGAATTCATTCTAGAAAGATTCCTCACCAATTTCACAAGTGTAAAAACAAAAAACAAACAAACAAACAAACCCTATCCTCACAGCTCAACATCTCTCCAGTAGTATCAGAGTATTTATCCTGGAGAAAACACACAGCAATGTAATGTGTGTGGCAAGGATCTTACCCAAAAGTCACAAGATAGGAACATAGTGGAGCCATACTTCCCAGACTCAGTGGTTGTGGCAAATCCTTTACCTTTCTCACTATATGTATTCTCTGATTACTTTAGTTCAGGTACTGAGCAACTGCAGTAAGTCCATATTTGAAAAGAAACTATAGAGATCTTTTCGTGTAAAATAAACCTGAATTCTAACTCCTCAGAGATTATTCTTTGGGACAGTAGTCCACCATCTTTTTGGTCTCCTGGCTTTCTGAATAAAGTCACTATTCCTTGCCCAACAAGTAGTTCTCAGTTTATTGGCCTGTTGTGTGGTGAGCTCTAAGAGCTTGGCTTTGGTAATACATTGATCAAACGCATTTGCTACATGCATTTCATGATGGTCTCTGGGAAGGAATCAGTGAAATGAAGGGGCCAACTTTATTAAATATGATTCATTCACACCGTGTTTCCTGGAAACACATACAGCCTGAATTACGAGATTCAACAGTGTGTGTGAATTAGCAACAGGGAGGGCGGAAAATAATGTAAAACTAGGACATGACTCATCATGGTCAGTATGATTGGGAAGCCCTTCCGTACATAGTCCAGCCTATTATAAAACATAAAACATATAATAATATAAAACATATTATAATAGAAAACATTATAATAGTTATAAAACATAACTATTCCTTTTGTTATAATTATTCATATTTCATACAAGCTTGTGGTCCCCTTCCTTTTTTTATAGCTATAGGGAACTTGCAGTTTAATAAGACTTTAAATTGTATACTTGTCTTAATTCCTTAGTTTCTTTGAAAAATGAATCCCTTTTGATTCTTCAGTCTTGCCATAATCTATGGTTGCCAGTAAATCTTTAACAACACTGGGAAGAGGGTCCCATGGCAGGACTTGCCTCCCAGCTACGTACTCAATTACCTTGATGATCTAAATGATTCAATGGATAGTTAATTCTTGGCATTTTGGGATTAATAGCCATTTGCACTACTGCCGCTGTTGCAGGCATTGCTTTACAAACCTCAATTCAAACACACAACTTTATTCAAAACTGGACCAAAGATGCTCATACTGTGTGGACCACTCAGGCTCAGGTAAATGAGGAAGTTCAAGATGAAATACAGGAAATAAAAACAGCCATCCAATGGGTCAGAGATCAATTAATAGGTTTACAAAAACAAGTTATACTAAAATGTGACTGGAATTCTACTCAATTTTGTATTACCCCTGTTCGGTTCAACTATAGTGCCTAGTATTGGGAACAAATAAAATTTCACTTGTAAAACATACGTGATAATGCTTCCTTAAATGTACAATTATTAGAAAAGGAAATCTTTGAAACCTTCTCTAAGAGTCTACTCTCTTCCAACAATTTGGAAACCTTAGCTGACCATCTAGCTGATCAATTATCTGGGCTAGAACCTCCAGGATGGTTTCAAAGCATTACACATAGTAATGTATCTAGAGCTGTAACACTGATAATTATCCTGGTGATTACATTTGTAGTATACCAGTGCCTTTCAACTAAAACTGTACAAACTAAACAAACTCAATTGGTCCCGGCCTT EMBV3_34768 AAGCAACCCGTAACTCTCACTTTGATTTGTTTGTACTTACGTCGATGCTCTGTGGTCTGC Gene GeneID:514176|ZDHHC13:XM_002699085:64_cdna Constitutive 0 NULL GeneID:514176 29 GENE ZDHHC13 NULL zinc finger, DHHC-type containing 13 EMBV3_32231 ATGAGCAGAGTGAGCATAACGTGTGCCAAGATATAAATGAATGTGATGCCAGCAATCAAT Variant GeneID:511566|EFEMP1:NM_001081717:83_cdna 630^872 1 EMBV3_36512 GeneID:511566 11 GENE EFEMP1 MGC148456 EGF-containing fibulin-like extracellular matrix protein 1 EMBV3_26919 CAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGTACCTCAGTGTCAGTTACATTCA Gene GeneID:528986|ZCCHC11:XM_002686402:266_cdna Constitutive 1 NULL GeneID:528986 3 GENE ZCCHC11 NULL zinc finger, CCHC domain containing 11 EMBV3_35669 TATGCATCTAAGGTGTAACCCTTGAAGGCTGGAGAAGGGAACGGCTTGCATAGTTTGGGC Gene BVV0102_095714 + 1 EMBV3_38556 GK000010.2:8140313-8169621 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015838 1 XLOC_008568 NonCoding TCONS_00015838 XLOC_008568 NonCoding NonCoding - 10:8164438-8165629 - TSS11092 1191 3 TCONS_00015838_1 65 0.230898404701931 1 0 0 0 0 0 0 0 0 1.98647084948653e-05 0 3.45465695753797e-06 3.84412398519288e-06 0.000147110388682803 0 0 0 0.000665281559407115 0 0 0 0.000114724801326282 0 0 0 0 0 1.77467773259605e-05 0 0 0 0.000126201206030351 XM_005196397.1 NKTR PREDICTED: Bos taurus natural killer-tumor recognition sequence (NKTR), transcript variant X2, mRNA. 9e-09 66.2 76.84 0.0780856423173804 XR_242987.1 CD27-AS1 PREDICTED: Homo sapiens CD27 antisense RNA 1 (CD27-AS1), transcript 6e-11 73.4 77.89 0.0780856423173804 0 noncoding AAATCAGAGTAATGACAACCAAGACCGAAAGAGCTAGAGCTCTTTATGCACCTAAGGTGTAACCCTTGAAGGCTGGAGAAGGGAACGGCTTGCTTAGTTTGGGCTGAATTTCTACTTTAGAAAGCTGTCTGTCTTAATGTCTCAGAAAGGATTCATAAAAACTAAGCTTTTGTTTTGCTACCATGGACTTACTGGGGAATTCTGTTTCTAAAAAGGTTTGATCTTCAGTCTGCTCCTTTGTCTGGAAAATGGATGATGTGATCATTAAGGTCCCCTTGGCTCTAATGTACTATGATAACATAAAGTTCAATGAAACAGCCATCTCTGAGTGAATTGGTGGTTCTGTTTAGATTTTCCTGTTAATTGTAGATTTAGAAGGAAGTGTTTAAAGCCACATATATGTGTTTACTATTAAAAATAACAATGGTGTATCACACTTCTACAGAAGTGAGGCACTATGAGATTCACTACCCAGAACTGAAAATGTGTGTAAGCGTGCTCTCCCATTCCCCACTCTCGGTTCTCACAGCACCCTGCAAGCAGGACACGTATAACCATCCGTGTGTTACTCTGAGGCCCCACACTTCAACAAGGTGAAACAGCCTACGAGACCACAGCTCCTAAGCCGCAGACTGGAAGCTGACCTCAATCCATGGGCCCCAGCCAGATGGGGAACCAAACAGCTGACCTCCTTCCATGACTCTCTTCTGACCCACCTCTTCACCACTGCCTGACCTGTATCGTGGCCTGAGTGTCTGCTGACACTTGGGTCCATGTTGACTATTCCCGCTCTGGTGCTGAGAGGAAGCGAGGCTGGCCATCATGAGTTTTGTATGGCTGATGTAACAGATTCCACAAGCTTGGGAGCTAAAAACAACACGAATGTATTAACTTACAGTTCTGCAGGTCAGAAGTCTTAAAATGCATCTCAAAGTGTTGGCAGGGCTGTGTTCTTTTCTAAAGGCTCCAGAAGAGAATCTCGTTTTTTTGCTTTTTCTTTTTCTGGTTTCTGGAGGCTGCCCACGTTCTGGCTTCTTCAAGGCCAGCAGGGACCAGTCTTTCTCACAACCCATCACTCTGCCTCCCTCGTCCACATTTTAAAGGACTGTCTACTGAACTTAAGTTCAGTTGGTCAGCAACCTAATTCTATCTGCAAACGGAGTTCTCCCCTGCCAGGTAATACTGTGGTTC TCONS_00015840 s 3' 3993 TCONS_00015840 s 3' 3993 EMBV3_28933 TTGAATCGCTTCCAACATCTGCTAGGCATCCTGTCCCTTGTGCCATGTCCCCTCTGATGT Gene GeneID:536375|TMEM229B:NM_001031768:172_cdna UTR3_Alt 1 NULL GeneID:536375 10 GENE TMEM229B C10H14orf83 C14orf83 FLJ33387 MGC143289 transmembrane protein 229B EMBV3_02630 AGGCCTGTGCCTCCATAATTTGGTCATTTGGCAGCCCCTGTTTCTCTGCTGTTTACAACA Gene GeneID:535219|CUL2:NM_001076909:130_cdna Constitutive 1 NULL GeneID:535219 13 GENE CUL2 MGC143284 cullin 2 EMBV3_02657 CGTCAGCTTTGACAATTTTGCAGTTGGTCCTAGAGATGGGAAGGTAATCATTGTGGACGC Gene GeneID:509304|LOC509304:XM_002685035:92_cdna UTR3_Alt 2 NULL GeneID:509304 1 GENE LOC509304 NULL hypothetical LOC509304 EMBV3_12298 CTCACTGAGGGAGAGTCAGAACTAGTCTCAGGCTTCAACGTAGAATATGCAGCAGGACCA Gene GeneID:100335478|LOC100335478:XM_002686743:50_cdna Constitutive 0 NULL GeneID:100335478 4 GENE LOC100335478 NULL NADH dehydrogenase subunit 1-like EMBV3_05349 TGAATATTAATGGAGAGGCTTCCCTGGGGGCATGAGACCTGTTTTGTGCTGCCTTGGCCT Gene GeneID:539079|GREM1:NM_001082450:82_cdna Constitutive 0 NULL GeneID:539079 10 GENE GREM1 NULL gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) EMBV3_42457 TGCCTATTGTACATGGTTTGGGTGCAAAGAGATGGTATTAGTCACCTTCTGGCTGGGTGC Gene BVT0102_260143 + 0 NULL GK000025.2:37691693-37712577 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02392 GGACCCATCACCCCAAACTTCCAAGAAGAGCAGGATAAACTGAAGCTGACAAAGCCTGTG Gene BVV0102_157686 + 0 NULL GK000018.2:57730882-57748137 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084391 TCONS_00084394 TCONS_00084395 TCONS_00084390 TCONS_00084393 1 XLOC_051552 Coding TCONS_00084395 XLOC_051552 Coding Coding C18H19orf75 18:57720789-57734487 j TSS63228 1116 1 TCONS_00084395_1 194 5 0.918887347594364 0 7.20298797886983e-05 4.14606472294865e-06 0 0 0.000157051417569665 2.37889208536071e-08 0 5.65473733772209e-05 0.000338093359598197 6.40175834530553e-06 6.41836481500127e-05 7.89122388126421e-25 0.000216179390992869 0.000167431591736592 1.57439449170455e-06 2.14631700094296e-05 4.4939042567357e-05 0.000121889554257097 0.000176134158465639 2.72019159886302e-06 0 0.000912462171151635 0.000991447826535324 0 0.000118009223125151 4.13600789586668e-05 5.16248643925186e-05 1.8889182114315e-11 2.7124834305272e-11 XM_870576.4 SIGLECL1 PREDICTED: Bos taurus SIGLEC family like 1 (SIGLECL1), transcript 0.0 1970 100.00 0.977598566308244 XM_005258799.1 SIGLECL1 PREDICTED: Homo sapiens SIGLEC family like 1 (SIGLECL1), transcript 1e-140 504 72.15 0.824372759856631 TCONS_00084395_1 sp|Q8N7X8|SIGL1_HUMAN SIGL1_HUMAN SIGLEC family-like protein 1; 3e-54 175 61.75 0.922680412371134 0 coding 0 0 1 0 -0.00458753390596156 0.980650056383251 0.00868852953901514 0.872797988158155 ATCCCTTATTAACCCACAATCTCACTGGATGGACCACATGTCCGACCTGTTCTACGGAGAGTGAGGTGGTTTCATGGTGTTCTTACTCAGAAATAAGCATAGCAGTCTTTGCTTAAGATGAATGCTCAGTCCATGTCCACCGGGATGGGGAAGAGGAAAATCTAAAAATGTTCATTGAATGGGTGCCCCCACCAGGCTGCTCGATTCCTCTTGCTCCTTGAAGAAGACTCTGCAGTGCAGCTGTTCCTTCCGCGGGACCCCCATGCCCTCCGTGCAGTGGTGGGTTGGGGGCACTCCCGTGGCCATGAACCACACAGGCTTTCGGGTGACTTCTACCACGCTTGGCCCCTGGGCCAACAGCACCATCCATCTGACCAAGCTGCCTGAAACGGGCACGAGCCTTCTCTGTGAGGGCAGGAACCCAGAGGGAACCCACGCTCTGACCATCCTGCTGAAGTCAGGAAGGAGTCCTTTGGTTGCCCAGACTTTCATGAAAGGGCTGATTCGGGGCGTGTTCTACGGAGCCATCGGAGTCACACTGCTCTTCCTCTGCCTTGTCCCACTCATAGCGAAACATATCAGAATGAAGCAGGCAAAGAAAATTGCAGCAATGAAGGCAGAAAAGAGCCCTAAAAGAGCCCGCCAAGGACTCGAGACGTCTCTAAGGCTCAAGGAACCAGGAAAATCCAGAGTCACCCCGTCTCCTGAGCAGCAGATATTGGACCCATCACCCCAAACTTCCAAGAAGAGCAGGATAAACTGAAGCTGACAAAGCCTGTGAAAACAACATTCATACCTGAAGTCCCCATCACCCTTGGAGTCACCAAAGCCCATAGAATCCTTAGAGACCCCAGGAACCCTGGAGTCTACAACAAACTCGGACCCCCCAGAGTATCCTCAGCCCATGAAGCCCTCTCCAGTCCCACCTGCCCCCTCACTGGTTATCCATTGAATAGGGTTACCTTGGACCTGGTCTTTGAACCCCTGAAAGCAAACTATATGATATGTTGTTTGGATTAGCCAGAAGACAGGTGCTCCATCCTGGGAGCTCCTTCAAAAGAAGGAGAAATAAACGTGAGACTGTGAAATATGTCCACCAAGAAATAGTTTTTGAGC EMBV3_36736 GACAATAGTCTTTACAGCTTTGCGAAGTATTCACAACCATTGCTTAAATTGCTGAGAAAG Gene BVT0102_288406 + 1 EMBV3_43249 GK000011.2:30557225-30596744 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024585 TCONS_00024587 TCONS_00024586 TCONS_00024589 1 XLOC_014538 Coding TCONS_00024587 XLOC_014538 Coding Coding FOXN2 11:30502068-30561035 j TSS18003 5595 1 TCONS_00024587_4 439 0.0371760500446828 6 0.905216565478411 6.5320146461538e-05 4.43885697608956e-11 3.36676668549945e-11 6.73144496154065e-08 2.42482521082652e-05 3.50797031018714e-09 5.7748979544036e-10 0.000229683986272752 4.32318673606283e-08 0.000221881623814391 6.23571289329535e-05 0.000208747818074031 5.44363615997681e-05 6.81409600241607e-05 6.94527985427762e-05 7.20074914855913e-05 0.00173681295493842 0.00220631530331968 1.00960289059656e-08 1.28716503756006e-14 4.38781746523997e-11 0.00103516612279987 3.11908297804883e-14 0.00195559414015754 4.06919374019053e-20 2.93556813523845e-26 1.31551503190815e-10 5.78858597341868e-09 8.49841309971242e-05 0.000155046827198197 XM_005192437.1 FOXN2 PREDICTED: Bos taurus forkhead box N2 (FOXN2), transcript variant 0.0 3222 100.00 0.319034852546917 XM_005264282.1 FOXN2 PREDICTED: Homo sapiens forkhead box N2 (FOXN2), transcript variant 0.0 3218 80.79 0.604825737265416 TCONS_00024587_4 sp|P32314|FOXN2_HUMAN FOXN2_HUMAN Forkhead box protein N2; 0.0 806 91.34 0.997722095671982 1 coding 0 0 0 0 -0.0595317205964326 0.72030475864131 -0.0353150753926273 0.562423940449733 GGGGAGGAAGCGAACGGGAGGGGGATGTGGTACTGCTGCGGCCGCCACCGCAGCTGCCGCTGCCTGCTCGGGGCCGCGTCTTCCCGGAGGCGGCTACTGGAAGCGGCCGAGAGCAGCTGTGGTGCTCTGCCATATTGTGTCTTCCCCTACCCATCCCTCGCCCCTCCGCTGCGGCGGCCGAGCTGACGAACTGTAAGAGTAAATGGGTCCAGTAATTGGAATGACTCCAGAAAAGAGAGCTGAAACTCCAGGAGCTGAAAAGGTTGCAGGATTGAGCCAGATTTACAAAATGGGAAGCTTGCCTGAAGCTGTTGATGCTGCCAGGCCAAAGGCCACTCTAGTGGACAATGAGTCAGCAGATGATGAACTCACAAACTTGAACTGGCTTCACGAAAGTACTAATCTCCTAACAAACTTCAGCTTTGGAAGCGAAGGTCTTCCAATTGTTAGTCCATTGTATGACATAGAAGGAGATGATGTGCCATCCTTTGGACCGTCGTGCTATCAGAGCCAAGAAAAAAAATCAGCAACTTCAAAGCCCCCATACTCCTTTAGTCTTCTCATTTATATGGCTATTGAACACTCTCCAAATAAGTGTTTGCCAGTCAAAGAAATTTATAGCTGGATTCTGAACCGCTTCCCATATTTTGCAACTGCACCAACTGGCTGGAAGAATTCTGTTCGACATAATCTGTCCCTGAATAAATGTTTTCAGAAAGTGGAAAGAAGCCACGGCAAGGTTAATGGAAAAGGTTCCTTATGGTGTGTTGATCCAGAATATAAACCCAACCTTATGCAGGCACTGAAGAAGCAACCTTTCTCCTCAAAATCCACATTTTACAGCCCTCCTGCATCACCACAAAGTGGTTCTTTATCACCTCATTACTTAAGCTCTGTACTCAAGCAGAACCAGGTGCGAACTCTCAAAGAATCTGATATTGATGCTGCCACTGCAATGATGCTTTTAAATACTTCTATAGAACAAGGAATTTTGGAATGTGAGAAGCCTCTGCCTCTTAAAACAGCAATGCAAAAAAAGAGGAGTTATAGCAATGCATTCAATCATTCCAGTGCTATGCGATTACATGAGAGTGATTCTTTAGCCACCAGCATTGACCCAAAAGAAGACCACAATTACAGTGCAAGTAGCATGGCAGCACAGCGTTGTGCGTCCAGATCTAGTGTGTCTTCTCTGTCTTCTGTGGATGAGGTGTATGAATTTATCCCAAAGAGTAGCCATGTAGGAAGTGATGGCAGTGAAGGATTTCGCAGTGAAGAAGACACAGACGTTGATTATGAAGATGATCCACTTGGAGACAGTGGCTATGCATCGCAGGCTTGTGCAGATACCACTGAAAAGGGGCAGCCAGACAAAAAGATGCGAAAACAAGCATGTCAAGAAATTGATGAGGAGCTCAAAGAGGCAGCTGGATCTCTGCTTCACCTTGCTGGTATTCGTACATGTCTAGGTTCTCTAATAAGTACTGCAAAGACACAGAATCAAAAGCAGCGGAAAAAATAGAAATACTTACTAGTGTGAAATTATTTTTAAATGTGGCAATACTCTTCTACTTAATTCTTTACAAGGGATATCAAAGCCATAATGGACTTCTTTTGGTTTAGGGTGGGGGAGGGGTGCTAATTGTTTATTTCAAAATATTTTTGTTTTTTGAATTTTTATTAAATAGTTGCTGTTAGGATCATGCCCAATCATCAATATGATGTGAAATCCTAAATGCATAATTTTTGTGATAAGTGTCTTCAAGATTGGAAATTTTATGTTTAAAAAAAAAAAAAAAAGTCCCAAGCCTCTGTCTTAAACTTGTAGGGAAGTCTTTTGTTCTGTTAATATGTCCAAGTGTAAGAACTGGCAACTCTAACTTTTTTTTCATTTTCTTTTCCTATCTGTAATTAACTATAGTTGCCGATCCAGCTAGAAATTTTGCTGCTTTCTTTCTCCCATACTCCTCTCTTGACACGTGTAATCCAGTAGGATGAGATTTGAATATTTTATTTTGTCTTAATTTTTGTTTTTAATTATTTTTTGTTGACACATGAACAAAGTTGAATGTAAGTTCGAAAAGATCCTAAATGTCCAGAAAGTTCCTTTTGCATAATCGGCAAAGAGATAGCAAAAAGTTCTAAGATTTAGAAAAGGCAATTTTGTGATGTAATTTATTCTAAGAACTTCAGTTTGTTACAATATTATTTTTTTCAAATTTTTTAACTTCCGAGATATTCCATAGTGTTGATTGGAGCCATTTATTGCAGCCAAAGTGCTTTGCAACCATTATTTTGATTTTAGCCACTAGCTGTCTTTGCTGAGGAGAAAGTATCCAATGAAAGGATATAGCCATGGAGTCCCATTTAGGCACACTTTTGCAATAAGAGGATCTTTCATTGGCTTGTTAAATGTACTGCATTCTGAAAATTACATGAATGGAGTGTAATCTAATATAAACATTTGAATATGTGTTATTTATGTCATCATAAATAAAGGTAGATCATTTAGGAAAAAACTTCTATTCAAGCTTTGTATGAATTAAATTGTATGTGCACCCAATTAAGTTAAAGGATTTAACAAAATTATAGAGACAAAATGCCTTCATGAATTTTAAAATTTGTATAAAATTTTATAAATCCTTTTAAGGAGGCAGTGTAATTACGTGCCATTAAATCCATCCTAAAAGATTTTGTTACTCTTCCAAATGTGTATTGCCCAAGGCCTTTTTCAGTATTTGAACAAATCTGCTTATATGATACACATTTTTTCATATCATTTGTATAGCTTGACTATATCATTCAAAAAGGACAAAGGATACTAATAAAGTTAAACTTATTCATAATGTATTTTTTACAATGGCAAAAGCAGCTTTCTAAAAGTTCAGTCTTAGCTCATGCTGCATCTTGTTTCATAGACAATGACCTTGTTTTTATTTTCTGATGATTTCATATATACATATACACATAAGCTTATGATTTTGGTTTGTTACTTTCAGCTGTTTCGATGATGATAAAGCATTTAAAAAAAAAAGACATTTTTCTTTTAACTTGTAGAGTTTATTTGAGCAAAACTGTCAAATGAGAAGCCTAATGAAAATGTCTTTTTCAGTTGTCAAGACATTAAGCCAGGGATAACAACTTTATCTGTCCTGTTTCCATGTTAACTGTAGTTGAACCTGGATAGCCACAATGATAGAATTGCTGCTGTTGAAAATAATAATCTTCCAATTTGTTGATAATATGTATGCAGGATGAGGTATTGAATTTTTTGTTCTTCATATGTATCACATCTGCTGCATAAAATTGCTAACCTAAGTTAACATCTTTTACTATACACAGTGAATATAACACCAAAAATTGTTAAATTGTTTTATCACAGTATAAATAGTACACGGGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCTGCCTTCTATGCAGGAGGCCCAGCTTCACTCCCTGGGTTGGGAAAATCCTTTGGAGAAGGGAATGACTACCCACTCCATTATTTTTGCCTGGGTAATTCTATGGACAGAAGAGCCCGGTGGGCTACAGCCCATGGGGTTGCAGAGTCAAATACGACTGAGAGACTAGCACACAGACACATACACATACACACAAATAGTACACAGATTATAAAAATCATTTAATAACAAAATATTTTTAAGCTGTTTACTGTGGTCCTCTGGATAGACCTTATTAACAGTGTTTTAATGATCTGGTTCCAATTTATTTTGTTAACTGAAATTCTGTACTACAAATGTTCTCTCTGGTTCTTGTCCATTAGATCATTAGTCTTTGTAAGTAAAGGAAAATGATCTAAGATATAAGGAAGGGAGAAAGTCATTCTCAGTTCAAATAAAGATCTTTAAAGTTATTTTTGTCAATATAAATAGCAATAACTTTTAAACTTGATTTTCTTTCCCTCTTCATGTACTCTTACCACAAATTTAAAAGTTATATTCATCACTAGCAAAGTCAATGAACTTTCACACTAAATGCTAACAGGAATAAGTTACAGGATGCTTTATTGAATTCTTATATAGAATTCACTGTATCACTTTCCATGTGCTGACTTACCCAGGCAGTTATTTTTAAGGGGAAGAACCTTTTTAATTACCATCCCCCTTAATTACTTCCATAGACATAATCCTATTCCTCAGGTGTATTGAGATAAAAACATGGCTAATAACCACCCAATTAAGGGAAGTCATATCTAGTCCTATGGACTGGAAATTGTATTTCTAAGAATATATTACTAGCAAATTTTACTGTAATAAAAAACAACTTGGAAATCCTGGAAAGGTTCTGTCTTTTAAAATTGTGACTTAAGCTAACGTATAATTTGCCTTGCATCAATATAAATTGTTAACAGCCAATCTCAGTTTATGACAGATCCCTAGTAGAAGTTTTAACAATTTATCTTCATCTTTCCCATCCCAAATAGAATCAGTGTTTCATGAATATATATTTTTGAAATTTATTTGTGCAATATATAACTCAATTAGTTCATGTTTTATTTTACTTTTCAAATTCAGAGAAAGAAAATATTACATGGAAAATGAATTGATGGATCACCTCCTTTTTGCCACCCTTGAGCCTTTCCTATCCTTATAACCAACATGGCGTCTCTTAACTTTGATTTCTTTGTATATAGTAAAGTTTAGAATATACATGTTTCTTTCTTTTCCTATTCTCTGAGGCATTGTGTAAAGGATCATACTAGGTGGTCAGTTAAATATATGTTAGCACAAATTCAAAGCTAGAGAAAAGTGTTAAGCGGGGAGTGTGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTGGTAGACCAGGAGGCCTTTCTCAGCAATTTAAGCAATGGTTGTGAATACTTCACAAAGCTGTAAAGACTATTGTCTTAAATACTACAGTAGCTTAACAACCTTTTGTGAAGACCATAGCATTTAATTAAGAAACTTTGAGGCTTTCTGGTTTACATATATATATATTATAGGTTTTTTTTGGTTTGAAATGTTATATAGCTTTGATTTAAACAGTTTGCTTCAATATGTTAATGATGTCAGAATATTTATTTTCTGAAAAACAAAGTATTTTGATGTTATACCTGCCATTTTTTCTTAAATCACACAATTTTTTTTGCTTCTGACTGCCAGTGCCAATGTCAAAATTGTTGTACATTTCTTATTAAGTGCTTAATTTTAAAGTATTATGTTGCCATTAAATAGTGTATAAAAATGTGTAATTGCCAATTCATTGTAACTATTATTTATTTTTAAGTGAAAGTGTAAGAAGGTTTCTGATTTAAGAAATTTGAGTTATTAAATTGTGTCCTTATCCTTTTTTCTAATGTAGCATAAAAATCCCCCTGAGTTTGAGTTATAACTGCCAGTAAGTAGATGACAAGTCCACGTGAACCACTTCTTAGTTGCCAGTCTTTGCTCATATTAAAAACAACTTAACAAACGTTTAGTTTTTGTATCTAATCTCTGATTATTAAATTGTTTATAAAGTTTATTTTTACCAAAGAGATGCAATTCACTCTGATAAAGTATTACAGAATAAATGTTGTTTTATAACA EMBV3_27191 GGTTGATGCAGAGATTGTTTCTCCAGAGGAGATTTACTTCCTGGGCCTTCATTCTTCGGC Gene BVT0102_308018 - 1 EMBV3_42398 GK000008.2:65373696-65414611 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225681 1 XLOC_137811 Coding TCONS_00225681 XLOC_137811 Coding Coding - 8:65381627-65383157 - TSS168904 1422 4 TCONS_00225681_1 61 0.708157524613221 2 0.0712884238064094 8.13280072285325e-05 8.12636883574769e-05 5.53157232889087e-05 7.49436585723994e-05 2.08319347976695e-05 0 0 0.000498577219529311 3.32917130983981e-05 0 0 0 4.03554924596879e-06 0 0 0 0 8.82240833450685e-06 8.57284921719552e-05 0.000213248130671304 0 0 2.10977448954379e-06 1.34736875033078e-05 0.000167283792726977 0.000128820048065517 0.000125670879764751 0 0 0 NM_174654.2 SLCO1A2 Bos taurus solute carrier organic anion transporter family, member 1A2 (SLCO1A2), mRNA. 6e-113 412 89.39 0.218002812939522 0 coding 0 0 0 0 -0.0664964603834051 0.612532822253962 0.0449813807406789 0.42627333979193 ACAAAGAAGAATGACTGGCCTCAGAGTCTGTTTTTTTTTAGCATCTCTTCCCTGTTCTCCTTAAGTAATGCTTGTGTGTGAGCTCAGTCGCTCAGTTGTGTTCGACTCTTCACGACTCCAGGTACTGCCAGGCTCCTCAGGTCCATGGGATTATCCCAGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCAGGGGATCTTCCTGACCCAGGGATCAAATCCATGTCTCCTGAGTCTCCTGCATTGGTAAGCAGATTCTTAACCACTGAGCCACCTGGGGAGCAATGCTATTACTTAAGATGCCTCCAGATATCTTCACCTGGATAACCCATGGGTACTCCAAATTTAACATACAAAACCCAAATCTGCATCCAAATGTTTCCCTCCTGTCTTCCCAATTTCTGTAAATGGCTCCTCCATCCACCCAATCAGCCAAGCTATACTATTATTGCAAATCTCTGGACAGAAAAAATTCATTTATTTCCCATCGTTCTCCAAATTTAACATTCATTGGAATCATCTGGAAAGCTAATTAAAGCACAGTTTCCTGAGACTCATGCCCAGAAATTCTAATTCAACGGTCTGGAATGGGATCTATGAATTTGCAATTCTAACAAGCTCACAGGTGACAGCAGGGCTGTTGGGCCAGGGTCCACAGTTTGAGAACCACTGCCCTAGATAATGAAAAAAACATAGACACATTTCTGTGAGCCGTCAAATCCCTACTCGGTGAGCAATCATTGCCGAAGAATGAAGGCCCAGGAAGTAAATCTCCTCTGGAGAAACAATCTCTGCATCAACCAGAGACAGGATGAATTAATGAAATGGCATGGGATTTAATTATTCCTTCATTCATCAACCATGTTTTGAGTGCCTACGCTCTGCTCGGCACAGTACAAGGCGCTGAGCTATACAATGCTGGATAAAAAAATGACATAATCCAAGTTTTAACAAGTGAACTCAGGCACTCTATTGAGACTGTAAATTGGGAATCATAATGCCATTGCGTAGGCTTTATGAGAGATATCAAAAAGAAGACTTATAGTAAGTGCCTAGTTCAGTGCCTGGAGCATTGATTCTCAATAAGGATAATGAACAATTGGTAACTAGAAGATACTAAGAACAGGTGGCAAGAATACACAGAAGAACTGTACAAAAAAGATCTTCATGGCCCAGATAATCACGATGGTGTGATCACTGACCTAGAGCCAGACATCCTGGAATGTAAAGTCAAGTGGGCCTTAGAAAACATCACTATGAACAAAACTAGTGGAGGTAATGGAATTCCAGTTGAGCTATTTCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCGAATCCCAAAGAAAG TCONS_00225676 TCONS_00225677 TCONS_00225678 TCONS_00225679 TCONS_00225680 s 3' 6834 TCONS_00225676 TCONS_00225677 TCONS_00225678 TCONS_00225679 TCONS_00225680 s 3' 6834 EMBV3_36872 TCATCGGGGCTTGCCGGGATAAGGAGGCTAAGATCAAGGAATTGTTGAAGAAGCTGGAGC Gene GeneID:514513|ANKRD35:XM_002686084:19_cdna Constitutive 0 NULL GeneID:514513 3 GENE ANKRD35 NULL ankyrin repeat domain 35 EMBV3_38545 CGCACGGAACAAAAGACTGAACAGAGATAGCCGGCTGCAGACCTTCCCCCTCCGGTGACA Gene BVT0102_442691 + 1 EMBV3_30069 GK000018.2:45339637-45513289 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00210234 TCONS_00249639 TCONS_00115686 TCONS_00252353 TCONS_00206812 TCONS_00197928 TCONS_00066283 TCONS_00250720 TCONS_00116100 TCONS_00242131 TCONS_00010366 TCONS_00071860 TCONS_00037672 TCONS_00220662 TCONS_00038381 TCONS_00200932 TCONS_00129573 TCONS_00242885 TCONS_00209846 TCONS_00065476 TCONS_00209711 TCONS_00218945 TCONS_00252107 TCONS_00148280 TCONS_00008224 TCONS_00021569 TCONS_00056146 TCONS_00249011 TCONS_00224475 TCONS_00137878 TCONS_00031939 TCONS_00107179 TCONS_00089345 TCONS_00239419 TCONS_00039951 TCONS_00157439 TCONS_00189806 TCONS_00238306 TCONS_00041057 TCONS_00063181 TCONS_00111497 TCONS_00224484 TCONS_00109027 TCONS_00020017 TCONS_00209636 TCONS_00007431 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00178325 TCONS_00233372 TCONS_00010054 TCONS_00153218 TCONS_00029865 TCONS_00240534 TCONS_00123168 TCONS_00065823 TCONS_00209032 TCONS_00085967 TCONS_00039904 TCONS_00130290 TCONS_00109025 TCONS_00063486 TCONS_00207755 TCONS_00199802 TCONS_00250246 TCONS_00209558 TCONS_00020756 TCONS_00238327 TCONS_00224483 TCONS_00088088 TCONS_00157613 TCONS_00021595 TCONS_00117619 TCONS_00155778 TCONS_00161835 TCONS_00059708 TCONS_00115148 TCONS_00170823 TCONS_00142649 TCONS_00122313 TCONS_00249087 TCONS_00020023 TCONS_00223554 TCONS_00107832 TCONS_00199037 TCONS_00019199 TCONS_00122479 TCONS_00122686 TCONS_00166449 TCONS_00031910 TCONS_00152645 92 XLOC_131641 XLOC_128744 XLOC_152582 XLOC_069855 XLOC_155294 XLOC_125332 XLOC_119588 XLOC_040997 XLOC_153663 XLOC_070269 XLOC_148795 XLOC_005917 XLOC_043630 XLOC_021501 XLOC_133979 XLOC_022206 XLOC_122582 XLOC_078286 XLOC_149548 XLOC_128357 XLOC_040195 XLOC_128222 XLOC_132264 XLOC_155048 XLOC_090162 XLOC_003782 XLOC_012242 XLOC_033949 XLOC_151954 XLOC_137538 XLOC_084087 XLOC_018184 XLOC_063090 XLOC_054130 XLOC_146085 XLOC_023768 XLOC_095894 XLOC_115843 XLOC_144973 XLOC_024868 XLOC_037908 XLOC_067397 XLOC_064932 XLOC_010695 XLOC_128147 XLOC_002992 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_108098 XLOC_142854 XLOC_005606 XLOC_092983 XLOC_016120 XLOC_147198 XLOC_074722 XLOC_040542 XLOC_127543 XLOC_052005 XLOC_023721 XLOC_079001 XLOC_064930 XLOC_038213 XLOC_126270 XLOC_121454 XLOC_153189 XLOC_128069 XLOC_011431 XLOC_144994 XLOC_052875 XLOC_096068 XLOC_012268 XLOC_071785 XLOC_094822 XLOC_098720 XLOC_036490 XLOC_069449 XLOC_103665 XLOC_087074 XLOC_073868 XLOC_152030 XLOC_010701 XLOC_136854 XLOC_063742 XLOC_120690 XLOC_009879 XLOC_074034 XLOC_074241 XLOC_101287 XLOC_018155 XLOC_092410 Coding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_13697 GGAGAACTCCAGAAGAAGCGTTTAGGAGACGATCACAGCTTTAACATTCTAACAAAGCCT Gene GeneID:514537|PCDH7:XM_002688187:12_cdna Constitutive 2 NULL GeneID:514537 6 GENE PCDH7 NULL protocadherin 7 EMBV3_07272 GAGGCGAACCACATCTTCGAGTTGATGCAGGCTATGTGGCTTGCCAAACATCTGAGCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07088 CAGGGTTCCTTCTCAACATCATTCCAGGTTTCCTCACAATTCAGCAGCCACTCTGTGGTC Gene GeneID:526700|LOC526700:XM_002683716:4_cdna Constitutive 0 NULL GeneID:526700 10 GENE LOC526700 NULL similar to olfactory receptor MOR118-1 EMBV3_05149 AGCTGGGGGATAGTTTATAGATATTGGGCTCTAAGTGGGAGTGATAGTAGCTGCTGATGG Gene GeneID:281349|NEU3:NM_174122:4_cdna UTR3_Alt 1 NULL GeneID:281349 15 GENE NEU3 NULL sialidase 3 (membrane sialidase) EMBV3_31710 ACACCCAATGCCTGTGCCACTTTCAACTTCCTCTGTCATGAAGGCCGAGTGACAGGAGCT Gene GeneID:511968|NDUFAF3:NM_001046105:142_cdna Constitutive 0 NULL GeneID:511968 22 GENE NDUFAF3 C22H3orf60 C3orf60 MGC128000 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 EMBV3_13532 ACAGGCAAGACCAAGGGTTATGGCTTTGTCAGCTTTAAGGACCCCAGTGACTATGTGCGC Gene GeneID:540172|RBM42:NM_001076205:718_cdna Constitutive 0 NULL GeneID:540172 18 GENE RBM42 MGC139843 RNA binding motif protein 42 EMBV3_31576 TACAAGGAATGGGCTTCTTAAGCCAATAAAATTCCTGCCAGAGGCCCTCTACACTCTCAC Gene BVV0102_023560 + 0 NULL GK000006.2:40349361-41169070 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27813 TCAGTGGCTCCACGTGTCCCTCAAGGAAAGGGTGTGTGTTCAGAGTGAGGCTCTGGGCTT Gene BVT0101_029865 + 1 EMBV3_40268 GK000009.2:103477814-103520045 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02703 ACAGGTTGTGCCCAAGTTCTGGCATCTGCTACTGACCCTAAGATGATCACCCAGCAGTCA Gene BVT0102_055104 + 0 NULL GK000025.2:35220134-35242673 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149364 1 XLOC_091240 NonCoding TCONS_00149364 XLOC_091240 NonCoding NonCoding - 25:35238464-35239682 - TSS111899 1218 2 TCONS_00149364_4 93 1 0 0 8.24994891853085e-06 0 0.000204535691309412 0 0 4.7879411831756e-06 0 0 0 0 0 0 0 0 0.00299244627974792 1.36307777226986e-05 4.1200149338107e-05 0 0.000188937533718023 0 0 0 0 0 0 0 0 0 0 XM_005250150.1 CUX1 PREDICTED: Homo sapiens cut-like homeobox 1 (CUX1), transcript 1e-45 188 66.24 0.595238095238095 0 noncoding CAGCTGTGAGTGCGTTAGGAGCAGGTGGAGGCCAAGAGGAGGATCCCTGAGCCTCGCAGAGCACAGCTGTCTGTCCGGGTTGTGCTCACAAGAGGGAAGCTGCCTGCCCACCAGGCTGAGCTACACTCATGGATGCCACACTTCTAGGTTTTCTCTTCCCAGATCCCACTTGCCTCGAGGTTCTGAGGGGTGTGGGGGGAGGTCCAGTGGGAGCGTGGTTAATGAGGTAGAAGGGGACAAATGAGTGTGATGACACCGGGGTAGGGGAGGACATTCAGGGAGGGAGCCAACTTGCAGCCTGACGGGGAGTGGCTGCCCGCCCACCACGGTCGCCAGGACCTTGCCTGGCTCCATCTCCCCTGAGCAGCTGGCTTACTGGCCTCAGAGGGGAGCGGCCCGGGATGGCTCAGGGCAGACTCTAGTTTTTCATAGGCCTGTCAAGAGGCGTCTGCTGTGGTGCATTTAAGGCAAAGGCTGTTGTCCCCCAGCTCAAGATCTAGGAAATCACCAACACTGTTTCACTGTGTGCTCAGCCCAGAAGGACGGGAGTGTTGCCCCCACTGGCTCCTCTGCTGTTTTCAGGGAGGTCTGTTTTCCTACCATCAGAGGAATGAAGAACATTGCATAGAAAGTCAACAGAGTTCAACGATCGCCCGTGCATGACAGGACACGAGTTCAGGGAGAACAAAGAAATCCAGGCCAACTTCAGGCGAGAAGGCACCTGCCTGCGGACAGAGCTGTCCCGCGACTCTCATCCCAACCTCTTAGGGCATGACTGCTGGGTGATCATCTTAGGGTCAGTAGCAGATGCCAGAACTTGCGTACAACCTGTCCTCTGCTTGGTCTGCTCATGGGGCTGTGGCAGCCCTGGGTATGGAGGCATTCGGGTGTCTCCTTCCTCCTGGGGCTAAGGGCAGCTGGGGAGGGTCTCTCAAAGCCAGAGGGAACACAGAGGAACACTTCACCCAAAGCTCTGCTGCACTCTGGATCTGGACCACCAACCAGCACATCTGGCTTTTAGGGAGACACAAAGATGCCCAAAGGAGGAAGACAGATGAACAGGGAGGCATTCGTGCTTTGGAAGTATAGGGAAACTGTCCCAGGGAGGCCATGAACTCTTATCTTTCTGCCTTGGTTACTGGCCTAGACATAGTGGCCATGACTTGGGAGTAGTCATACAAGTCAGGATCCTGGCAGATCCTGGGGATGCCTCCGCAG TCONS_00147028 TCONS_00147029 TCONS_00147030 TCONS_00147031 TCONS_00147032 TCONS_00147033 . 3' 2992 TCONS_00147028 TCONS_00147029 TCONS_00147030 TCONS_00147031 TCONS_00147032 TCONS_00147033 . 3' 4209 EMBV3_19363 CTGGTTGCTAATTGGAAAAGAGCCCCAGGTCCCAACTTTAACTCGTCTGGAGGCCTGAAA Gene BVT0102_107352 + 0 NULL GK000010.2:1-155009 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015589 TCONS_00015590 TCONS_00012279 TCONS_00015592 TCONS_00012280 TCONS_00015591 TCONS_00012282 3 XLOC_008520 XLOC_007827 XLOC_007829 NonCoding TCONS_00012282 XLOC_007829 NonCoding NonCoding - 10:69532-79108 - TSS9356 1891 2 TCONS_00012282_5 117 2 0.802715404699739 7.1949669641806e-06 0 0 0 0 9.45813545261424e-07 3.42658204357852e-07 0 0 0 0 0 1.51733530047357e-06 1.32670841201231e-06 3.45933285508658e-06 0.000628514232837786 0.000851625403016018 0.00229214974289078 0 0 0 0 0.00152011457983 2.65964543488966e-05 0 0 0 0 0 0 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 2e-69 268 77.51 0.178212585933369 0 noncoding CCCTCATGTTGAGATCTGGAGGGTAGAAGGGGCTCAGATTAAGTTGTGCTGGGAGACGTGGTGTTCCTCTTGAGTGAGACTGGTATGTCAGGGAACTTTTTGATTTGCATCAAGGGTGTCAAGTTCCATTTCGAATTTCAAGAGGGAACATGGGATTTCTCTCGAGATGATCTGGTGGTGATGGGGGAACCTCGTGTTTTTTCTCGAGGTATAGCGGGATTCTCAAGTTATGACAGGGAGCTCAGGGAGCCTTTCATATTGCCACAGAGAAGTCCAATTTTCATTCGAGTTGCAAGGGGGAGCTGGGCATTGCTCTCGAGTCACTGCAGGGCAAATAGACCTCATCTAGGCTTCTGTCCAGAAACTCCGTGATCCTCTCCGGTGGCAACAGGGATCTCGGGGTTGCATTCAAGGTTCACCCGTGGAGTCAGGCCTCACCTCGAGTTGAAGCAAAGAACTCCACTCTCCTCTCGAGTTGATACGGGTATCTCCTGGTGCCCATCGAGTGGCCTAAAGGGAGTCAAGCCTACTGTGGAGTTTTGAGAGGGGACTCGGGATTGCACTCTAGGCCCTGCAGAAAAGAAGGGCCTCATCTCACGATGATGGGGGAATCTCGTGGTTTTTCTCAAGCTGTGGCACGATGTGTGAGGTTTCTATCGAGTTACGATGGGGAACTCAGGGAGCCTCTCGTGTTGCCCCAGGGAAGTCCAATCTCCATTCAAGTTGAGAGGGGGAGCTGGGGCTTGCTCTGGAGTCACTGCAGGGCAAATAGACCTCATCTAGGCTTGGATCCAGAAACTCCATGTTCCTCTCCAGTGGCGACAGGGATCTCGGGGTTGCATTCAAGGTTCACCTGGGGAGTCAGGCCTTGCCTCGAGTTGAAGCAAAGAACTCCGCTCTCCTCTCGAGGTGCCACGGGTAGCTCTTCAAGCCCATCGAGCAGCCTAAAGTGAGTCAAGCCTCCTGTGCAGTTTTCAGAGGGGACTCAGGATTGCTCTCTAGGCCCTGCAGGAAAAGAAGGGCCTCATCTCACGATGATGGGGGAATCTCGTGGTTTTTCTCGAGCTGTGGCGCGACGTGTGTGGTTTCTCTTGATTTACAACAGGGAACTCAGGGAGCTTCTCCTGTGACCCCAGAGAAGTGCAGTCTCCATTCAAATTGCGAATGGGCGCACGACATTGCTCTCGAGTCACACAGGGGAATCGGGCCTCAAGACGCATTGAAGGGGGAATCTAGAGGTCTTTTTCGAGTTGAGGCAGGAAACCCTGGGTTCCCTCGACTTGTGACGGTGACCCCAGAGAGCTTCTCATGGTGCCTATTGGAAGTCAGGAATACTGAGGAGTTGGGAGGGGCCTCTCGGGACTCCACTGGGGTCAGTGCAGTTTAAGAGGGTCTCATCTCGAGTTGAGGCTTGAACCTCAGTGTTCCTCTCCTGTTCTTACCTGAGTTTTGGGGTGTGTAGGCCGTTTCAAACAGGGAATCAGATCTCGACTCGAGTGGAGGCATGGAACTCTGCTTTCCTCTCGAGTTGTCAAAGGGGTTTCAGGCCTCCAGCCGAGTTGAATTTGGGACCTGGGGCTCTTTTCCAATTAGCAACCGAAGCATCAGAACTCCCTTCGTGTTGTGAGTTGATTCTTGCCTGACATTAGAATCGGTGCAAGGGAATCAGGCCTGATCTTGAGTGGATGGGGAAATTCGTGGCTTTCGAATTGTGACAAGACCCGCGGGTTCCCCTCCAGTGTTAAGTAGATACCAGCCTCCTCTAGAGGTGCGACAGGGACGTCAGCATTCCTTTCCAGGCGAAGAGGGCAGGGGATAACAAGGCTCTTCTTGACTTGTGGCAGGAAACTCAGCATTCCTCTCTAGTGGGAACGGGAGAGGAACCCTGAGG TCONS_00015595 r 3' 21354 TCONS_00015595 r 3' 30929 EMBV3_27391 ACTCATAGACGGGAACGAGAGCTACGTGTCCTTCAGTCCCTGTTCAGAGGCCGTTTTCTT Gene BVT0102_246552 + 1 EMBV3_02481 GK000015.2:79087663-79117088 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062514 1 XLOC_037310 Coding TCONS_00062514 XLOC_037310 Coding Coding LOC100848717 15:79098933-79100129 = TSS46299 618 1 TCONS_00062514_2 180 4 0.486192468619247 0.00413895285228475 0.00278039047824929 0.00387829350208541 0.000595712584528809 0.00116638814771876 0.000607752164355822 0.00232136492185869 0.00266185947601381 0.00240023857542793 5.32620256229343e-05 1.1112563247255e-05 1.15717833586201e-05 0.00059738110279739 0.0019181363835329 0.000770064281305124 0.0105988406838293 0.00174619541500961 0.00527801655597462 0.00249474633224185 0.00481755712150596 0.0028245047759331 0.00126079348230941 0.00148447442367224 0.00303825547943867 0.00324000661781512 0.00224588551354985 0.00153588856610688 0.000248677441672012 1.57106825757641e-05 0.00075882769759173 XM_005194717.1 LOC100848717 PREDICTED: Bos taurus receptor-type tyrosine-protein phosphatase eta-like (LOC100848717), mRNA. 0.0 1110 100.00 0.993527508090615 XM_005253038.1 PTPRJ PREDICTED: Homo sapiens protein tyrosine phosphatase, receptor type, J (PTPRJ), transcript variant X1, mRNA. 5e-91 338 82.20 0.543689320388349 TCONS_00062514_2 sp|Q12913|PTPRJ_HUMAN PTPRJ_HUMAN Receptor-type tyrosine-protein phosphatase eta; 1e-52 184 79.46 0.616666666666667 0 coding 0 0 0 0 -0.173545915997162 0.294570806513643 -0.000432203185874461 0.993849827897553 ATGGCTGATCGGCCATCGGCAGATGTTTTGAGATTCACATATGGTGACTTCAAAAGGGGGGCCTCGAATACTTATGTGACATACCTCATAACGACAGAAGCAAAGAGACGTGCTCAGGGCTTGTCTGAAGTCTTGAAATACGAAGTTGATGTTGGCAACGAGTCCACCACGCACGGCTACTACAACGGGAAGCTGGAACCCCTGGGCTCCTATCGGGCTTGTGTGGCCGGCTTCACCAATATTGCCTTCAACCCTCGCAACGCGGGACTCATAGACGGGAACGAGAGCTACGTGTCCTTCAGTCCCTGTTCAGAGGCCGTTTTCTTGCCACAGGATCCAGAAGCTGAGCTGTCACTTGGCCATCAGGACCCAGCTCAGCTTCCTCTTCTGGCGTCCCCCCAGCCCCCGCCCGCCACGTCCCTCCTCCGAAGGCCCGTCGCACGTCCAGTCTGCACGCACTGTTTGCGCCTTTCTCTTCAGTGTAGTGGTTTGTGTGACCGTGTGCCGGACACACGCGCCCCTTTCAGCGCATGGAACTCTTGACTATTAGGATCAGAAGGAGCCATGGAAATCATCTTGTCGGATCCTCGTTTTATTTTTTAAAAATTTTATTGAAGT EMBV3_09776 GCATCAGGCACTGGGTCGTGCAGCGCCGTCTGATTTATGTTCATTCTCAGATAAGATGCT Gene BVV0102_147546 - 1 EMBV3_31378 GK000013.2:59490019-59903158 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06485 CTACTGGCCATTCCCTTTCTTTCACCGTTCACATGGTCGTACAGCCTGCCCGTATCTGAA Gene BVT0102_258899 + 0 NULL GK000003.2:108650186-108651327 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171225 1 XLOC_103774 Coding TCONS_00171225 XLOC_103774 Coding Coding MTF1 3:108650450-108694890 j TSS127767 7190 1 TCONS_00171225_6 750 11 0.838452710457031 2.74881440645839e-16 1.61872559625966e-22 8.44832099291864e-05 2.109918154794e-30 8.541119691083e-22 1.55391059747366e-21 6.54198722085665e-05 2.09407999604263e-05 5.66189938187823e-05 1.87091312551422e-16 4.18438356202478e-26 2.1243463548629e-12 8.98152721576058e-39 5.87804853235793e-29 1.38028329748591e-19 1.16066167919463e-42 2.73069139425631e-13 3.42424646249406e-08 1.64746900563959e-44 7.29541614768861e-18 2.0102432563967e-27 0.000419507741860211 7.74505943254192e-17 6.57256862412004e-05 0.000120037134780334 8.10211751693528e-05 5.66174374758223e-05 7.95696795640887e-05 1.57395010003628e-33 2.60591550495002e-13 XM_005204693.1 MTF1 PREDICTED: Bos taurus metal-regulatory transcription factor 1 (MTF1), transcript variant X4, mRNA. 0.0 6257 100.00 0.482336578581363 NM_005955.2 MTF1 Homo sapiens metal-regulatory transcription factor 1 (MTF1), mRNA. 0.0 4839 85.72 0.57913769123783 TCONS_00171225_6 sp|Q14872|MTF1_HUMAN MTF1_HUMAN Metal regulatory transcription factor 1; 0.0 1234 90.97 0.998666666666667 4 coding 0 0 0 0 -0.0155163538760995 0.920869033466953 0.00189878590581062 0.969099458465921 AGATCTAACAGGCATTTATAAGTCTGGAGCAGAATGAAAGCACGTTCAAAATCGCTTCTTGGAACACCACCACTCCTTGGCAGTGTACCGATTCAGATACGGGCAGGCTGTACGACCATGTGAACGGTGAAAGAAAGGGAATGGCCAGTAGGTGGCGTTACCTGGCCCGGGTGCGTGTCCGGAGGAAGCCGGCAGTCCTCTGGAGAAAAACCTGGGAGACACGGCCTGGGCAGACAGGTCACTGCCTTTCCATTTCTCACAATTGGGCTGAGCACAACTGAACCATGGGGGACCACAGTCCAGACGACAGCATCAGCTACTTTGAGGTAGAGGAAGATGAGCTGACCCCCGATGACAAGATGCTCAGGTTTGTGGATAAGAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTACGATAGGACGACTGTTCTTATCGAGCAGGATCCTGGCACTTTGGAGGATGAAGATGACGATGGACAGTGCGGAGAACACTTGCCTTTTCTAGTAGGGGGTGAAGAGGGCTTTCATCTAATAGATCATGAAGCAATGTCCCAGGGTTACGTGCAACACATTATCTCACCAGATCAGATCCATTTAACAATAAACCCTGGTTCCACGCCCATGCCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAGTCGGAATGTCCAGAAACAAAACGTAAAGAAGTAAAGCGGTACCAGTGCACCTTTGAGGGCTGTCCCCGCACCTACAGCACAGCAGGCAACCTGCGCACCCACCAGAAGACCCACCGAGGGGAGTACACCTTCGTCTGTAACCAGGAGGGCTGCGGCAAGGCCTTCCTCACCTCCTACAGCCTCAGGATCCACGTGCGGGTGCACACGAAGGAGAAGCCATTTGAGTGCGACGTGCAGGGCTGTGAGAAGGCGTTCAACACGCTGTACAGGCTGAAAGCACATCAGAGGCTTCACACAGGGAAGACGTTTAACTGTGAATCTGAAGGCTGCAGCAAGTACTTCACCACACTCAGTGATCTGAGGAAGCACATTCGAACCCATACAGGAGAAAAGCCATTTCGGTGTGATCATGATGGCTGTGGAAAAGCATTTGCAGCAAGCCACCACCTTAAAACTCACGTCCGTACACATACTGGTGAAAGACCCTTTTTCTGCCCCAGTAATGGCTGTGAGAAAACATTCAGCACTCAATACAGTCTCAAAAGTCACATGAAAGGTCACGATAACAAAGGAAACTCATACAGTGCACTTCTAAATCACAATGGATCAGAGGATACAAATCACTCACTTTGTCTGAGGAATTTAAGCCTTCTGTCCACAGATTCTGAATTTCAAGAAAATTCCAATACAGGCCAGAATCTCAGCACTCTCTCACCAGCAATCATTTTTGGACCAATGTTCCAGAAGTCAGATGACCCGGCAATTCAGGAAGATCCTCAACAGACAGCTGCCTTGATTGAAAGTTTTAATGGTGATGCGGAGTCAGTCAGTGATGTTCCGCCATCCACAAGACATTCAGCATCTTTATCTCTTCCACTTATACTGCAGCCTGGCATCTCCGAGCCACCCCAGCCTCTACTACCAGCCTCAGCACCATCTGCTCCTCTGCCTGCTCCCTCCCTAGGAACTGGTTCCCAGCAAGCTGCATTTGGCAACCCCCCTGCTCTCTTACAACCTCCAGAAGTGCCTGTTGCCCACAGCACGCAGTTTGCTGCTAATCATCAAGAGTTTCTTCCGCACCTCCAGGCACCGCAGCCCATCGTACCAGGACTCTCTGTTGTTGCTGGGGCCTTGGCGTCAGCAGCGGCAGTGGCATCAGCCATGGCAGCACCACCCCAACCACAAAGTACTACTGAGCCCCTGCCAGCCATGGTCCAGACTCTGCCCCTGGATGCCAACTCTGTCCTAACCAGTAATCCCACTATAACCATCACCCCGACTCCCAGCGCGGCTATCCTGCAGCCCAGCCTGGTCATGGGAGAGCAGAACTTACAGTGGCTACTGAATGGTGCCACCAGCACGCCGCAGGCTCAAGAGCAAATTCAAGCATCTAAAGTTGAGAAGGTGTTTTTTACCACTGCAGTACCAGTGGCCAGTAGCACAGGGAGCGCTGTACAGCAGATTGGCCTCAGTGTTCCTGTGATCATCATCAAACAAGAGGAGGCCTGTCAGTGTCAGTGCGCGTGCCGGGACTCTGCCAAGGAGCGGGCGGCCAGCAGGAGGAAGGGCTGTCCTTCCCCGCCCCCTCCCACGCTGAGCGCCCAGCCTCCTGACGGGCCCAGCCTGAAGCTGCCACCACAGACTTTCTCCCCACCCCCGATCCCCCTGTCATCCTCTTCCACTGCCGCCTCCTCCTGTGAGCAAAGCAGACAGGCGGTGACTCCTTCAGACCCGCAGACAGAGCCACTCCGTGCCATAGATATGTCAGAGTTTCTGTCCCTCCAGAGCCTGGACACCACTTCCAATCTGATTCCCATTGAAGCACTACTGCAGGAAGAGGAAGAGATGGGCCTGACCAGCAGTTTCTCCAAGTGAAAGGCCCGCATGTGCTCCCCTCCTGGAACAGGCCGAGCAGGAAGCAGGAGGTGTGTGATGCGTAACATCGTGGGGGTCAGCAATTTGAAGGATGAAGAAATCTACTGTTTGTAATCCTCACCTTTCAGACGTATTTTCTTTATTCGAATCCCAGGAGCATCCATTTTTAATGAACTGATCTTTGGAAAAAACAAAAACACAAAAAAAGGCTAAGTTATAAATGAACTGTTTGGCTGCACTGTATGTCACTTTTGCTTATTGTCATGTGAACTTGGAAATTAAGGTTACTCGTATGCATAAAAATTCTAAATGAAAGGGTGTGGTTTCCATCAATCTGATGCTGCCCATCTCTTGCACTGGGGTCTTTGTAGTTGGGCAGTGGAGTTCAGTGTATTGGATGTTGCGATGCCCTGTGAGTCTTTTGAGGCTGAAGCTTGCTTGCAAGGCCAGACCCTCACTCCATCCAAGAGGCATGTGGCAAAGGCAGGTCAGACAGCCGTGAGCTGGACAGGGATCGGGCGAGGCGGTTTTGTGGTCTGTGCTTGGTGATGGTGGAGCTGAGGGTGACTATGGCTGATGTCACCCTGCAGCCAGCAGCATCACAAACGGGCATCCAAAATCCTGGGCCGAGGCTGTGGGGACTGTCCGCTTCCTCCGGAGCCCTAGCAAGTTGTTGACTGCTCTCTGTCTGTCCCTGACACCTGTGCGGAGCAGGCTCTATCAACATGATCATACTGTTTGCTCTGGGTTCTTGCTTCTCTCTCTGCTGGTTGCCAGGCCTTGCAGATCACAGTAATGAATTTTTCTTGGGGATCATCCCTGTTTTGTCCTAGAGTGGACATGTGGTTTATGGCCAGTTGCTGGCTGGTGGTCTGCCTTCCTTGAATGGTATCTTCTTCCTCGGAGCAGAAGAGCTGCATTTTGCTGATCAGGAGAAGGTGCGGCTTGATGGGAGTGATGTTCGGTTGGCATGTCATCGGCAGGCCAGGTATCCTGGTCTTGGGTTCCAGCCAGGCTTTTGGTTGCCCTCCCCCCCCCCCCATCTCTGCCTCTCACCGCTCTGGATTTTGCATACAGCCTAGTACAGTGCAAAGAAGGATGTGACTTGCTCGGCTTAGTCATATGATTTCTAAACAGAAAAAAGAAAAAGAAAAAAAAAAAAACACAAAGCGATGATCTTCTACTCAGGGTAAAACAAAAAATTCCCCTTCCACCAAAAAGCCTGAAATGTTGCAATAAGTTATCTCATTTGGAATGTTTCATTAAGTTGTGTTATAGGGAAAAAAATTTTTTTATTTGTGTATAGAATTATATCCATCTCTCTGCCTTTGGCTCCGAGTCAGTCATTGCCTCTTAAAACATAAAATACAATCCACACTAAAATGGAAAGTTTCTCTTAACTGGCTATATTAATGTAGTCACGAGTGCTCCCCACACTCACTGAACTCAGAAACTAGGTATGGCCCAAGGTCTAACGAGGCCTCTGCCTCCCAAGGGCCTCGTCCCTGCCTTGAGCAAGCAGTAGGGTGCCACACACAGGGCTGCCCTATTGAGTCAGCGACGTTAGGCAGAAAGCAGCCGTGATTTCGCCTTCCTGTTTCACTCCCTAAGGTGACGAGATCTGCATTTGTCACTCTCCTGTTCCCTGCACCATTACTCAGGGCCAGCCAAGACAGTATCTAGAGTAATCATTTACCTGGGAGCCAGGGGCCCTGCTTTTAACAGGATGTTCAGGGACAGATTCGGATGAGAGGGCAGAGGTGGTAAATGTGACTGCCATGGAGAGAAGTGGGGTTTACTACAAGCAGCTGGTGGTTTCTCACTCCTGGGGTCTAGTCAGGAGAATCCGTTTCTTTTTTGACCCTTTGCATTCTCCTGTCCAAAAAACTGGTGGGTTCTGGGTGACCACTGACCTCAGCAGAAGTTGATAAGGCAGGAGGAACCTTCTGTTACCACAGTGGGTTCGTCTCCCTGGAAAACAGCTGCTGAGTATGGGTTGTCCTTGGCTGTCGCTCAGCCTTGAGCTTGTGGGAAGCTTTGCGGTAGGTCCCTGGCTGTTTTCTCTACACCTTCTGAGAGACAGCAGCACAGTGGGGTCCCAAGACACCTCCCCATGCGCGCACCCTAGGCTCACCTGAGATGTGGCTCCTGGGAGCTGAGGTGGAAAACAGGAGCCCGGTGAAGGCCGTCGGAAGTGCCCATGGTTGATATATTGCTTCCCCACTGCTGTGCTTGTGTTGGGTCTGCTTGGGTCAGTGACTTTTCTGCTCTCCTAAGGTTGAGGGTGGTGAAGAAGCAGAGTTTTAGGCTGACAGATTTTTCTAGTTGAAGTGTCTGCCTTTTGAGGGCGACTGATTACAGGGGGGCTTTTGAAAACATCAGGGATATGCTTAAAATGCTAGTGAGTGGTTGTGAAGAGCAGGTTTACTCCACAGGGTAGGCAGTCTCATTTCCTTCCTCTTCTCGCACTCTTCCCCACCCTACCTACCCCCTTCTATCAGCCTGGTCTCTAGTGCCAAGGGCCTTGGAGAAGAGAGGGCCACTGAAAATGGAGCCACAAAGAGCCTTCACGAAGAGTGGTTTTCAAACCCAGGAACGATTCTAGGGTGAAGCTAGGGAAGGTGTGCAGACTTCCAGCAGGTAATATCACGCCTTTTTTCTTCCCACGGTAACCTTAATCAAACCCCCCATAGACTGAGACTTTCTGCTCCCACTGGCATCTCCAGTTAGACTGCCCCTTTATAGGGTGCTAGTCAGCCTGGGGAATTTGGGGATTTGTGGGCTTGGCAGGTGGCCGCAAACTTTGGCTGGCACCACCAAATTGCCTTAGTGAATTTGGCCCTTCCCAGGTAGGTGAGGGAGGCATTGAGGGAAAGTGGCCTTACCTTTCCTGGCAGTTTGGCCAACCTCTCGGGGGCATCAGTAGTTTGATGACAGGAACTGGTGTCACTCACTGAATCCCACCCCACCCCACCTCATCCCCCCTTTAGAAGGAGATCATGGTACAAAGCCCAGGAGGGGCCTTCAGGTGTGAAGACTGCTCTGGGTAGAAGAAAGGGACTTCTTTTCACCATCTCTGGAGAGTTAATAGACTGGAGAGTTTTACTTTCAGGGTCAAGGCAGCAGACTGATGGGGATAATGGGCGGGTGGGTTTTTCTGAGAGATTTTGTATAATGCTGAATGTGTCCAAAGGGACGGGTTTGCAGAACCTCATATTGGTATATTAAAGAAATAATTTTTTAAAAAAAGCACTTTAGGTTATTTTATCTTTAACTCAATTGCTGCAATTTCTTTTGTGTGTGTATATATATACATATATATACTTTCCACAAAGTTTTATTTTTTGCTCAGAAAAAAAGTTAAATTGAGGTGTGACAAGAAAAGCACTTACCTTGGTGCAATATGTGTAGCTTGACGGTCGTTGTCCCATGTGACCCTGGCCTGGCCGCGTTTTCCACTCTATCAGCCCTGTGCTATGAGGCTGTCCATAGGGAAACACTATTATGCATTCTCAGCAACTGCTCAATCTATGCAAGCCTTCCCTGTGTGCCCAAGGGCACCCCCTCAGGCTCTCTGAAGAACTGCTGCGGGTCCTGTTTCTTCTGCTGACTGTTGAGGCCCTTTTTCATCACTTTTGCTTGGCCGTTTGCCATCTTTCCCCCTTCACCGTTACACAGTGATGCCTGAAAGGAAGAAACCGGTTGTTCCTAGGTAGACACCTGGCACTTTCTAGACTTTTACATTTGTAATCAGGTCTATTGTCCTTAATCCTAAAGACTTCTCCAGAGTCACTGAAATCATTGATTGTGGAACTGCAACAATATTGCTAATGAGTTTACAGTATTTCTACACCACCAATCAGAAATATGTTTGGGGAAGGTGGTGGGGGTCACCACCCTAGCCATCCTGTCTCTTTAAGCAAAAGCCTCCAGCCTTCATTGAATCCAGTAAACAAAGCTGTTAATAATCTGCTTTATGAACTTTCTTCCTTCCCTCTCACTCCTCTCCCCTCCCATTTTATCTTCAGTTTTCAGGCTACAATGAATAGAGAAGTTTTAAAACATATTTCAGCCAAAGCAGAAAGATTTCCATAGATCATATACAAATAGTTCTGCTATGAGATAGATCAGAAATTGACCATTCCTAAATATTGGGGAGGGGAGAGGCAACAAAACTGAATTAAGCATATTTCTGATTGGTCGTCAGTTTAGCCTTTTTTCTCTTGCATGTGTTGGGAGGCAAGAGAAGGGGTCCCATGTTTCTTCTGAAACCTTTTGGGGAAGCTGATGATCACTGTTGGGCATTTCTGTTACTCCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAAATGCAAATTAAACTGGATCTTTATGTCATTGTGTACATAGTACAAGCTTTTTTTACTGGAAGCAAAGTTTAAAACCACACACTGCCCTTTTGGTGGTGTGCTTGCTGGGCCCCAAATTGGGTGATGTCATGTCACTTTCTCAGCTCAATGCAGTTTCTACTCTTTTTCTTACGGGGAAATTTTTCATAAAATCTTTTCTTCACCAAACCCAGGGGTGTTTTCTGCAATATCCTTGTTATCCTCATAGTGGTGCCAGGTCCAAGAGGCCCGTCTTGCCCTTTTCCCCCGTGTCCTCAGGCC EMBV3_18327 TTAGTAAGCCAGCAACTGGACCAAGTCCTTTCTGAACCAAAGTGCCAGACAAGCTTCGGG Gene GeneID:789324|NME4:NM_001077906:342_cdna Constitutive 0 NULL GeneID:789324 25 GENE NME4 MGC134183 NDPKD non-metastatic cells 4, protein expressed in EMBV3_36880 AGATTGACCTTCGGCCCTTATCCTAAATCAAGAAGGCTGGAACGATAGGGTCCACATGGG Gene BVT0102_123654 + 0 NULL GK000008.2:7287892-7414944 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224313 TCONS_00224312 TCONS_00224314 1 XLOC_137502 NonCoding TCONS_00224312 XLOC_137502 NonCoding NonCoding - 8:7386170-7390384 - TSS168242 1325 2 TCONS_00224312_1 68 0.110188679245283 3 0.686209352005697 1.33750296659565e-10 0 0 0 1.85751664718794e-06 0 0 0 0 0 0 0 0 0 0 0.00201325582689539 0 0.000795328215614626 0 0 1.14230977886786e-06 0.000334924658756486 0.00216713967729847 0.000898331025499433 5.22203633451652e-06 7.96788040935642e-06 2.20472920710095e-06 0 0 0 XR_231798.1 LOC101903074 PREDICTED: Bos taurus uncharacterized LOC101903074 (LOC101903074), 0.0 991 100.00 0.413584905660377 0 noncoding 0 0 0 0 -0.0960891473590438 0.555536499421514 -0.0112304439483694 0.88813076508416 CACCAGATTCCAGACCTCCGGCTACGTGACCATCCCTTCAGAGAATTTTTCATTGGTGGGGTATAAGAAGGACTCTGTCCGAAAGGGAGGACGCTGGTTCTCCTTAAGAGCCAGTCATCCTCTTTTTTCCCTCCAATAAATGTCCCTTTTCTTGTCTGACTGCGCAGCCCACTCTCTTTTTCTCTGCACTCGCCTTACATTCTGGTGCCGAAACCCGGGAGGGAAGAGCCACTGCGACCGGGTGGGCTCCTCTCCCGAGCCCAGCTCTGGTGGTCCCCTCCCGGGACCTCGCCGAGAAACTGAGGCGAGCTCGGGACGGGACTCTCCACCTGCCTTGCTGGACTGACATCCACACACCAGCCCATTTTTCATCCATCAGTTACAAGGTCGTCCCCAGATATGGGCAAGAAACTAAAAAAGGCAGAAGAAAGACCTCAACCCCCTCAACGAGACCTTTTAAATTTAGCCTTTAAGATTTTCAATAACTGGGAAGAACAGGCAAAGCTAGAGAAGGCCCACGGAGTCCTCCGACCCAGCTGTGCCCAGCCTCCTCGGACTCGCCGCTGAAGACTGAAGGTGCCCCGGGCCCCAGGCCCCGACTCTCATCACCTCTTCGGAGCCCGGGTAACTCTTACAGTCGCAGGAAGCAGTTACAGAAGATTGACCTTCGGCCCTTATCCTAAATCAAGAAGGCTGGAACGATAGGGTCCACATGGGGTCTCACTGATAAGACGGCTCGTTATGTCGACCTCTCAAATAATAAAGAATAAATCACAGTGATCCTTGAGACTGACCAAATTGCCCAAATGGCATCCTGTTACCTCACTGGTGCCTATCTTCTCAAAGCTGCGATTCCACCAGATTCCAGACCTCCGGCTACGTGACCTTCCCTTCAGAGAATTTTTCATTGGTGGGGTATAAGAAGGACTCTGTCAGAAAGGGAGGACGCTGGTTCTCCTTAAGAGCCAGTCACCCTCTCTTTTCCCTCTAATAAATTTCCCCCTTCTTCTCTGACTGTGCAGCTCTCTCTCTTTTTCTCTGCACTCCCCTTACAGTTTCCTTCTCCAAGGGATCTTCCTGATCCAGGGATGGAATCCCATCTCCTGTGTCTCTTGCATTGCAAGTGGATTCTTTACCCACTGAGTCATCAAGGAAGATTTACTCCTGGCTGAATGGAAGGCAGAAAACTGAGCTGGGATTCGGGCTGTATATCCCGCCCCCAACAAATGTTCAAGCCCTTCTCAGCTCTTGTTGCAAATTCACAAAATTTGCAAAATCCTCCCTGATGACTGACCCACTACTTCCCTTCACACACACACAAATTA TCONS_00224315 s 5' 12084 TCONS_00224315 s 5' 16297 EMBV3_35087 TTCCTGTCAGAAAAAACCATGAAGCACCAGATACACCAGCCACTGACGCCTACAGAAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00271 CTAATAACCAGCTGCAGTTCCTACCTCCAGTACCTCACTGTGGACCGAAATCGTCTATGG Variant GeneID:532910|LRRC28:NM_001038156:44_cdna 471^565 4 EMBV3_04883 GeneID:532910 21 GENE LRRC28 MGC134389 leucine rich repeat containing 28 EMBV3_30908 CTGGGACAGGATGGGTCAGAAGGGAGGCTAGAAACAAACCCAGTTTACCCGAAGTTAGTA Gene GeneID:536745|GPKOW:XM_002700080:165_cdna Constitutive 2 NULL GeneID:536745 X GENE GPKOW NULL G patch domain and KOW motifs EMBV3_14952 CTGCACGATGGGGTCCTGGCAGTTACTTCACCTTCGTTTCCTGCCACTTTTCCTAACATT Gene BVT0102_260452 - 1 EMBV3_19105 GK000002.2:111821121-111987823 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33255 GTAAATATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTAAACCCACTTCCAT Gene GeneID:532701|RSRC2:NM_001102146:225_cdna Constitutive 4 NULL GeneID:532701 17 GENE RSRC2 MGC143309 arginine/serine-rich coiled-coil 2 EMBV3_27286 GGCTTTTCTTTCGCATCTAGGCCACTAAATATTGGGCTGAAGTCCAGCCAGCACATGCTG Gene BVT0102_218642 + 1 EMBV3_37900 GK000025.2:26134743-26145405 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146572 TCONS_00146570 TCONS_00144838 TCONS_00146571 2 XLOC_089142 XLOC_088665 Coding TCONS_00144838 XLOC_088665 NonCoding NonCoding NFATC2IP 25:26143481-26145489 x TSS108661 1909 4 TCONS_00144838_5 65 0.375065479308539 2 0.0498256103637269 1.80760786937291e-11 8.03191863209265e-05 0.000720132815412747 0.000227466903828795 0.000765538591963303 0.000611838257435419 0.000319419631988477 6.28883080955656e-13 0.000103483907791304 0.00047239795467647 3.17444931725694e-15 0.000200770709648213 0.000299178301565876 6.23269462511042e-07 0.000469594049145783 0.00264057167076138 1.79864804391213e-32 0.000869259757968639 0.00016386878219651 0.000967361407494341 0.000511501493897798 0.00128364938346899 0.000764611803876618 0.00461242222729395 0.00114655831058258 0.000899599846815266 0.000909729080160954 0.000345452141680918 0.000210593605944371 0.000928841204934574 NM_001098883.2 NFATC2IP Bos taurus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (NFATC2IP), mRNA. 7e-32 143 97.62 0.0434782608695652 NM_032815.3 NFATC2IP Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (NFATC2IP), mRNA. 2e-69 268 65.00 0.696699842849659 0 noncoding ACAAGTTTAATGTATTCCTGTTTATTCTGTTGACACTGAACATATCATTTTAATGTATTCAGACTTATTAATGGATATATCTTACCTGAAAAAAATGAGCTATACCATATCATGGATTATTTAAATATTAAAAATTTTCTTTCTATATTTCCCACATTATAAGTTCAAACGAATGCTACATTCCAACAACAAGAAAAAAACTTTTTAAAGAGAGTGATGTGCTTTTGCCAAAATCATACCACATATCAGGTGGAAAATTCATGGCTTTATTAGTAGATGGCAGAGAAAACTGGCTCATTATACAGTGAAACTAAAACTTGGATCTCATAGACAAAGGTGAATTTTAAATAGTTTAAAAGTACTATTCAACATTTCAGCCTGGCATCAAGCAATGAAAACAAATATTTGACCACGCAGGGCAGATGTCAGCCAGTACACACACCAGCATGTACTGGCTGGACTTCAGCCCAATATTTAGTGGCCTAGATGTGAAAGAAAAGCCAATAAAACTAATAGAAGAAACTGCAAAGTATTGTTAACTATTTTTAAAAACACAAGTGCCATCTTCAGAGTTTTTCCAACTTCCCAGGAATATAGGAGGAACTTTTGAGAGTAAACAAAAAAAAAAATGGTAAGAAGCCCCCATGAGAAAAGGAACAAAGATAAATTAGCAATTCACAAAAAGGGGCACCAGAAAGGCTGACAGGAAAATGAAGAAATTCCTCAAATTACTGGTGACCAGATGAATGTACATTAAAACAGGGCACCACTTTCTACCCAAGAGACTGGCAAAAGTTAGAAAGTTGGGCAGTAATAAATGCTGGTGGGGATGAGCAGAAATAGGAAGCTTTAAGTGGGAGAGTCAAAGACCATTCTAAAAAAACAATAGAGAAATTAATCTGTCTGATGCATAATTCCATCCTGGGTACCTCTGCTGGAGAACTTTACATAAGTATGGAAGGAGACATAGAAAAAGATGTTCACCATGACCATGGCCTTGCCTGTGGGCCGAGGAGTTGCAGGTAACCCAGGTGTCTACCACTTAGCAAATGTCTAAAAAAAATGCACTTAACACCCACCATGGAATATCTTGGAGCAGCTCAAAGAAATAAAGCTGATGTAGCCTAAGCAACCCATGTTGAGTGAGAAAAGCAGCAGGGCAAGATCAACGGGATTATATTACATGTGGGCAAAGTATATGCACACAGACAGCAGAGCATGTTCAAGGAAACATTCATATTCAAAGACATGGAGTCAACACACTAGAACGGATGCTTACAGGAGAGGATGACATGAAGGGAAAAAGCCATAAACCCTGTGTGGACTGCGATCCTGAGATCAAAACCAAAAGGTTCAAGGTGCTCAATTATGCTTTAAACAACACGTGTGCATCAGGAAGGTGGCTCAAAAGGGTCCTAGGGTGAGGAAGACACCCAAGCCTGAGAATCTACTGTACTCTTCAAAATAATAACCCACTGTTTGCCTCTGGTGAAGCTATTGCATTTGTGAGGCTCATCATCTAGTTTCCGGCTGGGCAGAGGAACCACACCTTGGTTCAAGTCAACTTCACCTCCATCCCCCGATGACCCTGAGGCCACGGCTGGTCCTGGATGTGGCAGAATTCTGAGGCCTGGAGTCCCCTTCCAACCCTTACTAATTTCAACTCACTCTTTCAGTATGAGAAGTTTCATATAAGAGACATTTCAGTGAGTGATGGTGGACTAGTGAAGGTGAGGGGATACCTTCTCCATGTCCCAGAGGGCCGTAAAATTCAGCACACCCTGTGGATGGAGCCACAGTCCACCTAAGGCAGCAAAGACCATCATACAATTAAACCAGGTAGCTAACGGCTTGAAACTGGGGTCAAAGGAGAGGGAGTCAAAGATCACTCCTGGATTTTGCTTCAGCT TCONS_00146571 TCONS_00146573 r 5' 0 TCONS_00146571 TCONS_00146573 r 5' 0 EMBV3_38306 GTGGCTCAGAGACTCAAAGTTCCCCGGAAGATGGGAATGTGAACAGGAAACAGATGTGAA Gene BVT0102_021499 + 1 EMBV3_37681 GK000016.2:27886297-28009797 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00668 GATGACCTGTACCAGGCCCTGGCCAGCGGTCAGCTGACAACCTGCTGGCTGGCCTGCGAG Variant GeneID:504764|GRHPR:XM_002689718:25_cdna 809^950 4 EMBV3_28237 GeneID:504764 8 GENE GRHPR NULL glyoxylate reductase/hydroxypyruvate reductase EMBV3_38922 AGGTGCTGAAGCTCTCTGTTTATCTGAGGGAGTGACCGAGAAGCTGGTGTGTGATGTGGT Gene BVV0102_422155 + 0 NULL GK000009.2:25663239-25681084 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00239458 1 XLOC_146124 NonCoding TCONS_00239458 XLOC_146124 NonCoding NonCoding - 9:25672606-25672910 - TSS179136 304 1 TCONS_00239458_1 40 1 0 0 0 0 0 0 0 0 0 2.59543462632755e-05 0 0 0 9.43844392139283e-06 0.00181042103930265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0297656314652343 0.80722134363179 0.0383936245386199 0.58553716763664 CTTCCAGCATGCTGAAGCAATCTGGAAGCAATGTTGGCATTCTCCAGCTTCTAAATGCCAGTCCAGGTGATCCCATTCCTACCTGTATGCACCTCCCCACCCTGTGCGCCCTTTTGAGTATCATGTTGTAGCACGAAGCACAACCACATCACACACCAGCTTCTCGGTCACTCCCTCAGATAAACAGAGAGCTTCAGCACCTGGCCCACAAATGCTGCCAGACTCCCCTGTTATCTCAGACAACCCCAGCACCCGTGATTCATAGCTTCTCAGTCACATAAAGGGACTGCGTTTGCTTCCATTC TCONS_00236846 TCONS_00236847 TCONS_00236848 . 3' 8173 TCONS_00236846 TCONS_00236847 TCONS_00236848 . 3' 8476 EMBV3_19735 CAGATCTTCGGATAATACCCTGTTTCCATTCTTGGGACAATTTAATGGTAGATGACCGCC Gene BVT0102_209816 + 1 EMBV3_34950 GK000023.2:45111457-45119090 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135305 1 XLOC_081686 NonCoding TCONS_00135305 XLOC_081686 NonCoding NonCoding - 23:45111839-45114305 - TSS100695 2466 3 TCONS_00135305_4 78 1 0 9.3794450662053e-05 0.00023226237073522 0.000431553385123003 5.05118954075997e-05 6.1184084033387e-59 1.33981372043081e-33 0 0 0.000310357558967694 4.17122431389077e-05 1.85659809599933e-06 1.4499953568456e-06 2.32707326233284e-06 0 0 0 0 0 3.98105593373766e-05 5.8324672755258e-05 1.7341762164346e-05 0 0 1.99756871287417e-155 0.000342771216098408 0.000151423208091662 1.63041278352739e-05 7.98655140719778e-101 0 0 XM_005249200.1 ELOVL2 PREDICTED: Homo sapiens ELOVL fatty acid elongase 2 (ELOVL2), 6e-129 466 68.84 0.529197080291971 0 noncoding 0 0 0 0 -0.0958304800766475 0.643409429883474 0.00212905293767676 0.96252061220402 GAACCGAATAAAAGGAATCATGACATACTTTAGTGTAAAAATCAATTTATTATACAACAATCATACAGATGCTTTTTATCTACAAGGAAAAAATGGCTTCTCCTGCCTCCCTGGCCACCTCAGTCATGATACTATGTTCTTAAGATATAAGTGTTTTCCAAGGAAAATCAAAAAAGTGCTATCCTTATTTTCTAAATAAGGAAGTCCCCAGAAACATAAAATGAAATGGAAATACTGGAAAGAACTAGACTGGTTTCTTACACAAGAAATGAAGTTCTGTCCATCATAGTAACCTTTTGCCTTAAAAATACCTCTCCAATGTGGGGAGGACTTTCCCCTCAGTATGTCTAAATAGTTTAGTATGTAATTTTGATGGGTTGAGATTTCTGTATTTAATTCCAGTAAGTGAACATTCTTTTGTTTGAAAAATTGGAATAAACATATGCTTACCATACTCATATAACTGTTTTCATTCTTATGAGTGAGGAGAAATTTATTTGGGGGGAAAACTTCCCTTTTTTTTTCTAACAAATTATACAGAACTTTTTTTTAAAACAGCTTTGCTTTAGGAAAATCACATTAAAAGTAAACATTTTGTTTAAAATTGTAACACTTAATAACAGGTGAAGATAGTTACCTGATTCAGTTTTTGTGACTAAGACTTCATAACCCTGTATTTTTTTTTTAACCAGCCCTTAAATGGTTTAAGGCTATAAAGTGTTTCATGAAGCTTCCCTAGGATTACAGATCAAGTCAGAAGTAAGCATCCTGAAGCCTCTATCCAAATCGAGCTGGAGAGTGTAAACTAACCGAGCTTCCCCTTTGATCAGCGGTTTCCAGCTGTCTGGGTCTGCCTTGGCTGAAGGACACCTCTGTCCTTGCCGTGTGGGGATGGAGCCCACGGGAGCCTCCGGAACTGCAGCTGCGAGGCTGAGTGCAGAGCCGGGGCCTGATGACTGAGGGGAAGCTGGAGACAGCAGCTGACCCGTGACCTCTGCCTTCTGAGCCTCATTTTTACCTGCGGTGAGTGCATTTTGATAACATTGTAGCTCCCCTCTGAGACCTAAAACGGCACCAAAGTCTAGCTCCTCCGAGGGGCTTCCTCCCCAGTCCGTCGAGGACTTTGTTACGGGAGCAGGGAGAGTCATACTCAAAGCGAGCCCTTGTTTTAAAGTGAGTTTCTGGGAGGACACAGTACTTAGAGCTGTGCAGGCATGATGTGATGGAAGGAGGGGGTTGAGCACCCTAGAACAAGACAGCTTTAGGAGACTAGAAAGACCCAAGAGAAAGCGGACATCAGACGGAAGATGTCTGTTCCGGAGAAATGGGTCCGCTGGCAGAGGAGGGGCTGGAGGGCATGATGCCCTCGCCGTGAAGGCTGGTAAGGTCAGTTGCCTTTCAGGGCAGCGGAACCCCGAGGGGCGTTTACAAGAAACAGACGTTGGAAGTGTCAGTATGCCCAGTGTCAGTGTACACGTCAGTACCACAGTCCGTGTTTTTGTTTTCCCATTAAAAAAATTTTTTTTCAAACGGAAGCTCAGAAAACAGAAATGGTCCCCAAAGGACAAAGTCCTTTTGTGCTGTAATGTGTTGGGGCATTTAAGCCTCTGATGTCAATGTTACGACCTAAAAACTTCTTAAAGTAAGGCAGGAAAGCAGAGAGAGTGTCAAAGTGCGCAAATCTCGTTTTTACAGGGTATGAATTATTTTATAGGGTGTAAATCTGTATCAGATCTTCGGATAATACCCTGTTTCCATTCTTGGGACAATTTAATGGTAGATGACCGCCCTGCCCTTGGGGAGAAAGGAGTGGTCCCTCTCGCCTTCCTCTGTGTGCTTCTCTGCGGGGCTCGGGTTACCCGAGCAGGGCAAGGGTGTGCTGGGCTTGCCAAACCGGCGCTTTTTACTGCAGGCAGTGCTGGAACCTTTCCATAGCCCTCTCTTTCTTCCTATTTTCAAAAACCTAACCTGTAAAGACAAACAGCAGCTATTTGGGGATAATATTCTCAAGTAGGCTCTTAAGAAATCGTTGACAAGGTCAGTATCTATTTTTCCCTCGATGCTGTATTAATTCTAACTTACAGATACTCCAGTGACAGATCATTCTAAGGGCCCAGTGATGCAGATTAGTGGGCTCGAGTCCTTGTTCAGAGAGGAGATAGGCAGCCAAATTCAGATCCTACTTTTAAAATGAACACTGTTATCCTAACCCAGGGTACCTTAACATAGGATGTAGATGTGAATGCATGAATAACTAAGGAAACCCAGTTAAAACAGAAGAACTAGGCCTATCCAGAGCCCTTGTGCTATGAGGGTTTGGGAGATTTTTCTTCAAAATAAAAAAAAAGGAATAGAAAACTATTACCATGTCACTAAGTTGAGAATTAGGAGTAATTGTGGGAATCTGAGATTCTGGAGACAAAACAGACTTGAGAGAGAAAAGGGGTTGCTGGGTTGTCCATCTAT TCONS_00133541 TCONS_00133543 r 3' 384 TCONS_00133541 TCONS_00133543 r 3' 2849 EMBV3_01327 TATCCGACCCATGTGACTTCAACAAGTTTATCCTGTGCAACCTGACGGTGGAGGCAGTGG Gene GeneID:518003|LOC518003:XM_002686852:39_cdna Constitutive 0 NULL GeneID:518003 4 GENE LOC518003 NULL similar to KIAA0644 gene product EMBV3_11385 GTAGAGATTACCACTTTGTTTCACGGCAGGCGTTTGAGGCAGACATAGCAGCCGGAAAGT Gene GeneID:528109|MPP5:XM_002690977:242_cdna UTR3_Alt 2 NULL GeneID:528109 10 GENE MPP5 NULL membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) EMBV3_04492 CGGCTATCGATGGATCTGCAACCCGCGCGGATTGCTTCATGGAGGTGCCATGGCAACAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25195 TTAAGCAGGTTTCACGGAAGTCTCCCTCCGACACAGAGGGTCTAGTAAAGAGCCTGCCTT Gene GeneID:539387|MPZL1:NM_001076158:5_cdna UTR3_Alt 3 NULL GeneID:539387 3 GENE MPZL1 PZR myelin protein zero-like 1 EMBV3_18709 ACTCAGTAGTGTCTGCTACCCACAGGATAGGAAGTGTGGTCGTCTAACTGCCCAAGGTCA Gene BVT0102_209142 + 0 NULL GK000021.2:44705098-44805297 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121293 TCONS_00121298 TCONS_00121295 TCONS_00121299 TCONS_00121292 TCONS_00121296 TCONS_00121294 TCONS_00121297 1 XLOC_073386 Coding TCONS_00121293 XLOC_073386 NonCoding Coding NPAS3 21:44700341-44796953 x TSS90402 529 0.166351606805293 4 0.994565836188426 0.00194542110552053 0.000407418881473284 0.00991183438876359 0.000380205926719565 0.00202148557802863 0.000903109372477125 8.05649912204959e-168 0.000508279236166565 0.00100864125683148 1.33227008571026e-99 2.81142815352075e-06 2.85516816856692e-06 1.84731454691049e-205 2.16013848724405e-05 3.40497559414445e-05 0 0 0 0.00223370144970065 0.00238367872843041 0.00549538616271963 0 0 0 0.00403673217992992 0.00572738412086084 0.00448057328563879 1.30143220440354e-05 2.17020546366566e-16 0 0 noncoding 0 0 0 0 -0.26891633614043 0.07658441541877 0.0116121436120177 0.804729127248301 AACCACCTGTAAGCCCTGAGTCCTTCACAGCTGTTGCTCCTTTTCTGAACAAACAGCTGAACTCGGGCTTGGAGGCGTCCTGAAAGGTCAGCGGATCCTCTCTGAGAAGCTCAGATTTCTCCCCACTCGTCACCAGTTCTGCCTTTTTCTCCCCTGCAAAACCATCATCACCACAACTGAGTCAGACTCAGTAGTGTCTGCTACCCACAGGATAGGAAGTGTGGTCGTCTAACTGCCCAAGGTCAGGACCCATTTCTGGTCCTTGCTGTAGTGTTTCCATTCTCGGAAACACACTGCTCTGAGATCAGAGGAGAGTCTAGCTCCTAAGCCTGGCAGACAGCCGGGGGCAATATGGTGTGGTGAAAACTGCATGGACGTGGGAGTCAGGCCTGGTGTGGAGTCCCAGCTCGGCTGTTTCTACCTGTACAACCTCACCTGAGGAGAAAGCCCCAAGAACCAACCAGAAATACGATTCGACATGAAGAGACACGAAAAATTGTTTCATTCAGATGATGGCCCTCTGGCCGTT TCONS_00119490 TCONS_00119503 TCONS_00119507 TCONS_00119509 r 3' 62 TCONS_00119490 TCONS_00119503 TCONS_00119507 TCONS_00119509 r 3' 94 EMBV3_18413 GAACTCACGGCAGCCAAGAAGAGTTCCAATGTGGTGTGCTCCAAGGGTGAAAGGACGAAA Gene GeneID:100299266|LOC100299266:XM_002689725:70_cdna Constitutive 0 NULL GeneID:100299266 8 GENE LOC100299266 NULL hypothetical protein LOC100299266 EMBV3_08003 CTATAGCAACAGTGAAAGCCCTCCCTCACCCTGATAGGAATGGATTTGTTATATTTCTGC Gene BVT0101_004109 + 0 NULL GK000016.2:24305816-24330706 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068810 TCONS_00068809 TCONS_00068808 1 XLOC_041796 Coding TCONS_00068809 XLOC_041796 Coding Coding RAB3GAP2 16:24329282-24433840 j TSS51450 7445 1 TCONS_00068809_8 1305 35 0.929129565691441 0.00173784421320241 0.00103383837292083 0.00112805850472722 0.000906026630049493 0.000988793739129003 0.000646124718467547 0.00110095639580548 0.00183063817719758 0.00248389402581348 3.8591432442863e-11 2.0241665856038e-05 4.89137904904616e-05 4.69965457163656e-05 0.000175130551900165 0.000144622640975584 0.00247167411719145 0.000627814963713233 0.00209475247709857 0.0018138625239125 0.0022155098518692 0.000415347929342212 0.00115686744570606 0.0011717983649424 0.0025335653644632 0.00195171702028902 0.00173207521761577 0.000900163510698277 0.000124691630926419 9.73906246881011e-05 8.57245206839254e-08 NM_001192199.1 RAB3GAP2 Bos taurus RAB3 GTPase activating protein subunit 2 (non-catalytic) (RAB3GAP2), mRNA. 0.0 1.059e+04 99.93 0.789791806581598 NM_012414.3 RAB3GAP2 Homo sapiens RAB3 GTPase activating protein subunit 2 (non-catalytic) (RAB3GAP2), mRNA. 0.0 6630 87.48 0.716722632639355 TCONS_00068809_8 sp|Q9H2M9|RBGPR_HUMAN RBGPR_HUMAN Rab3 GTPase-activating protein non-catalytic subunit; 0.0 2480 92.80 0.999233716475096 2 coding 1 1 1 0 -0.0492783685225932 0.707813884960263 0.000781102191857896 0.987724954361245 CAGCTTCCGGTTTGGTTTCCCCGCCCCCTGTGTAGCTGAAGCTCTTCGGGCTCCGCGGTGGTGGCTGGAGCAGCGGCGGGGTGGCGGGGGGGCAGGGCGTGGTGAAGTAAGGTGAATGCCCGAGCGGGCTTCCCGGAGCCATGGCCTGCTCCATTGTCCAGTTCTGCTCCTTCCAGGACCTCCAGGCCGCCCGGGACTTCCTCTTCCCTCATCTGCGGGAGGAGACCCCCAGCGGCGCCGTGAGGAGGGACCCCAGTAAATCAAACTGGGAAGATGATGGTTGGGGAGCATGGGAAGAATCAGAACCCCAAGAACCTAAGAAGGAAATACTTGCAAACCACAAAAAACTTGCTGGCTTCAAGATTGTATTTTATCATTATCTCCAACCAATGATCTTATGGTTATAGCTCGGGAACAAAAAGCTGTATTTCTAGTGCCAAAATGGAAACATAGTGATAAAGGGAAGGAAGAAATGCAGTTTGCTGTTGGTTGGAGTGGTTCTTTAAGTGTTGAAGAAGGGGAATGTGTAACCAGTGCTCTGTGCATCCCACTAGCAAGCCAGAAGAGGAGTTCCACTGGACGTCCAGACTGGACCTGCATTGTGGTGGGCTTTACTTCGGGTTACGTACGCTTCTACACAGAGAACGGCGTGCTGCTGCTCGCTCAGCTCCTGAACGAGGACTCAGTGCTTCAGCTCAAATGCAGGACCTACGAAATCCCACGACATCCTGGTGTGACTGAGCAGAATGAAGAGTTGAGTATATTATATCCAGCTGCCATTGTGACTATTGATGGATTTAGCCTTTTTCAGTCTCTTCGTGCTTGTCGAAATCAGGTAGCAAAAGCTGCAGCATCAGGCAATGAGAACATCCAGCCACCACCATTAGCGTATAAGAAATGGGGTCTACAAGATATTGACACAATTATTGATCATGCTAGTATTGGTATTATGACTCTGTCCCCTTTTGATCAAATGAAGACTGCCTCCAATATCGGTGGATATAATGCAGCAATTAAAAACAGCCCACCAGCCATGTCTCAGTATATCACTGTAGGGTCCAGTCCATTTACAGGCTTCTTCTATGCTTTAGAGGGAAGCACGCAACCACTATTATCTCACGTTGCACTTGCAGTGGCAAGTAAACTCACTTCCGCTTTATTTAATGCTGCCAGTGGTTGGCTTGGTTGGAAGAGCAAGCATGAAGAAGAAGCTTTCCAGAAGCAAAAACCCAAGGTGGAACCAGCTACCCCATTAGCTGTAAGATTTGGGCTTCCAGATTCTAGACGCCATGGTGAAAGTATATGTCTGTCTCCATGTAACACACTGGCAGCAGTAACAGATGATTTTGGCAGAGTTATTTTGTTGGATGTAGCTAGAGGAATTGCAATACGCATGTGGAAAGGGTATCGAGATGCACAGACTGGTTGGATCCAGATTGTAGAGGACCTCCACGAAAGAGTGCCAGAAAAGGGAGACTTTTCCCCATTTGGAAGTCCTCAGGGTCCAAGTCGAGTGGCTCAGTTCCTTGTGATCTATGCACCACGAAGGGGCATTTTAGAAGTGTGGAGTACACAGCAGGGCCCTCGAGTTGGCGCTTTCAACGTGGGAAAGTACTGCAGGCTTCTGTATCCTGGCTATAAAATAATGGGCTTAAATAACATTACTAGTCAGAGTTGGCAGCCCCAGACTTACCAGATCTGCCTGGTTGATCCAGTGTCTGGAAGTGTGAAAACAGTCAGTGTTCCTTTCCACTTAGCATTGAGCGATAAGAAGAGTGAACGAGCCAAGGACATGCACTTAGTGAAGAAACTGGGAACCTTGCTGAAAGCAAAATGTCCCAATCTTGATTTGATTGAAACAGAAATAAAGGAATTAATTCTTGATATTAAATACCCTGCAACCAAAAAACAAGCATTGGAAAGCATATTGGCAAGCGAACGTTTACCATTTTCCTGCCTTAAAAACATCACTCAGACATTAATGGACACTTTAAAAAATCAAGAGCTTGAGTCTGTTGATGAAGGACTGCTACAATTTTGTGCCAATAAATTGAAATTACTCCATCTTTATGAGTCTGTTAGTCAATTAAATTCCACTGATTTTCATTCAGATACACCATTCTCTGATAATGACTTGGCCGTGTTACTAAGGCTGGATGAAAAAGAACTCCTTAAGCTCCAGGCCTTGTTAGAGAAGTATAAGCAAGAGAACAACAGGACTGCTGTCCGATTTTCTGATGATAAGGATGGTGTGTTGCCTGTGAAAACATTCCTGGAATATTTAGAATATGAGAAAGATGTGGTCAACATAAAGAAGACAAGTGAAGAGGAATATGTGGCTTTGGGCAGTTTCTTTTTTTGGAAGTGTTTATGTGGAGAAAGCTCCACTGAGGAAATGTGTCACACTTTGGAGTCGGCTGGACTTAGCCCCCAGCTGTTGTTGTCTCTGCTCCTGAGTGTTTGGCTTTCTAAGGAAAAAGATATTTTGGACAAACCGCAGTCTGTCTGCTGTCTCCATACGATGCTGTACCTCCTGAGCAAGATGAAAGTGGCCATCGAAGAGACCTGGGATTCCCAGTCAGTGTCCCCTTGGTGGCAGCAGATGCGCACGGTCTGTATTCAGTCCGAGAACAACGGGGCTGCGCTGTTGTCTGCGCACGTCGGGCATGCTGTCGCTGCCCAGATATCCAACAGCTTGACCGAGAAGAAATTTTCCCAAACAGTTTCAGGAACTGACTCGGAAGCCCTCACTGATTCCTGGGAGGCCCTTTCTCTTGACACGGAATACTGGAAACTCCTCCTGAAACAGCTGGAGGACTGTCTCCTGCTTCAGACTCTGCTTCACAGCAAAACGAACACCCGGACCTCCAAAGTGTCTTCACTTCAGGCTGAGCCGCTCCCGAAGCTTTCTGTGAAAAAGCTGTTAGAAGGAGGAAAAGGTGGCATTGCAGACAGTGTAGCCAAGTGGATATTTAAACAGGACTTCAGCCCTGAAGTGCTAAAACTGGCTAATAAAGGAAGAGATGCAGAAAACCCAGATGAACCCAGAGAAGGTATTAACCGAGGTTTATTTGAGGTGTCAGAGGTGGAGATGGACTTGGGAGCCATTCCAGACCTGCTGCACTTGGCCTACAAGCAGTTCCCTTGCAGCCTCGAGCTGGACGTGCTGCACGCACACTGCTGCTGGGAGTACGTCGTGCAGTGGAATAAAGACCCGGAGGAAGCACGTTTTTTTGTTAGGTCAATAGAACACTTGAAGCATATTCTTAATGCCCATATTCAGAATGGCATTGCGCTGATGATGTGGAACACATTCTTAGTCAAAAGGTTTTCTGCTGCTACGTACTTGATGGATAAGGTTGGAAAAGCACCAAAGGATAGATTATGCCGAAGGGATGTGGGGATGAGCGACACAGCAGTGACTTCCTTCCTCGGCTGCTGCTGGGATCTTCTTCAGACTTTAATGGAGGCAGACGTCAGCCGGGATGAAATGCAGGTGCCCGTCTTGGACACGGAGGACGCCTGGCTGACTGTGGAAGGCCCGGTCTCCATCGTGGAGCTGGCCCTGGATCAGAAGCACATCCACTACCCGCTGGTGGTGCACCATTCTGTCCTGGGCGCCATCCTCTACGCTGTCATGAGGTTCTCTCTCAAGACCGTGAAGCCACTCTCTCTTTTTGACAGTAAGGGGAAAAATGCATTTTTCAAAGACTTAACTTCAATTCAGTTATTACCTAGTGGGGAAATGGATCCAAATTTTATTTCTGTACGACAACAGTTCTTACTGAAAGTCGTCAGTGCAGCTGTCCAGGCCCGACACACAGTTGCAAAAGACAGAGACTCCACAGAAGAGGCAGCAACCGCCCCTTTTGGTAAAGACCAGGACTGGCCAGTGCTGGCTGTGGACCTGGCCCATCACCTTCAAGTCAATGAAGATGTTGTCAGGAGGCATTATGTGGGGGAACTCTACAACTACGGAGCTGACCACCTAGGAGAGGAGGCCATCCTCCAGGTTCAGGACAAAGAGGTCCTGGCCTCCCAGCTGCTGGTGTTGATCGGGCAGCGGCTGGCGCACGCCGTGCTCCGCACTCAGACGAGGGAGGGGCTGGAGCTGCTCGCCAGGCTGCCCCCCACGCTGTGCACCTGGCTGAAGGCCATGAACCCCCAGGATCTTCAAAACACAGAAGTGCCCATTGCAACAACAGCTAAACTAGTAAATAAAGTCATTGAGCTTTTACCAGAAAACCACGGGCAGTATAGTTTAGCCTTACACCTCACTGAAGCTGTGGAAGCCATATCTCTTCCTCCTTTATGACACTTATCTCCTACAAACAGTCTCAAATTGTGTGACTCTAATATGAACTAGTGCATGGTTATTTTACACAATAAGATCTGGAATTTTACGGAGGAAGTATGTTTTTTTCTTTTGTAAAGTAAATAAAAATACACATTACTTTTAAAAAGTGCAGTCTTGGCTAAATTCCACCTTTGGTTAATACTGACAATAAAATATAAACAGGTATCAGTTATACTATCAATTTCTCTTGAAGCTGTTTTCCTGTTTATTTTTGATTTAAGCACTTAAGTAGCTTTATTGTCCAAATTTGCTATTTAAAACTGGTTATAATTTACAGATTATGTTCTTATAAGAGTCTATATTTCGTACTCAAAATGTTATTGTAATTAAATTTAAATGTGTTCATGTGTAGTCCCCATCAGTAAAATGAGAGAACTGTCTCACTCTGTTTTAATAAATGTTGGGAAAATGCTTTTGTTATCATGCTTAATCCCATCCTGGGGGACTGCCCCCTGGAGTTCTGGATGCTGACAGGCTTCTTTCCCAGAGGAGGTTATGCTGGTGCCATCAGAGGAGGAATAATGGGTTCAAAACCATCATATTCATCAGAATGGACACTAAGTAGAACCCTTAACCTGTTGCACTTGCCAAAACAGAATCTGAGATGCAATCTAACCCAGCAAAATTAATTATAATGCAAGTTAAGATTTGCTTTTTGCCAAGATTCAAAATTGTATCCATATCAGGTAACTGTAAAAATGTATTATCTTGTAAAACTTATGTTTAAAAAAAGGGCAAAGATGCTAAGAATTTAAATCCAACTTTATTTTTCCTACAAGTGTTTAGAAATGTCTGTTTCTGGGATCTGGTCATGTTTCCTGTTCTTAGGAACAGTATAGAAAATGCTTAGTGATGATACTACAGCTCAGCAAACCTACCTCACTGCTGGCTTGAGAGGATGAATACAACTAATTTTGTACCCTACAGTGCCTAGAGCAGTCCAAGTGCTGAATAATCATTTGTTGATTAAAACCAAATTAACCAAAACTCTGTAAAAAAAAGTACTTTGAGCTGTACAAATACCAAGTATTTATCAAGGTAAATCTTCGGAATGTAGCCATACAGCGCAATTGTTGACATGTCCTGGGTCACAGTTGTTACACGTAGCAACTCGTTGTGATACAAAAGTTTGTTTCTTCACTTCCTCAGGAAGAAGCCAGCTCTTGCAATTGTGCAAATTTGAGGCGTTGTTTTCAGGAATATAAAGGAAAAGTCTGATGTCTGAGAATATCCCAATGTAAATTCTTTTTAACAGAGAGATCACATTCAAATAAGAACTGTCTAAAACCTGGTAATTACTGTTTCATTTTAAATCGTGAGAGATTAATTTTTCAGGTGCCTTGAGTGTTTGGGGTGAAGGCCCATGTGTCTGACCGAGGCATACGCTCTGCAGCAGTAACACTGAAAAAGGCCTCCAGGCGGTCCAGCCCCTCAGCCTCTGCTGGGATCGCTGGTACCCCATCCAGACACATTCACGTGATTTCTGAGTATCAGGCATTCTGTAGTCACTTGTTACACGCACTCTACAAGATGAGTTCTTTCCGTGACTTGTCTAGATACTCTGAAAGTAGTTCTGAACCTTGGAGGCTGGTCAGAGAAACTTGGAATTACAGGCATTGTTAAAGAGTAAATTACTCACTCTGATTCCATTATCACTTTGGGGGGTATCTAACAAGCATTTTAGATAATAACACTGGTTGAACTCTGATAGGACACACAATCAAATTTTGGGATTATTGAGAATATATTAATAAGCTGAAATACGGCTCCTAGGACCATAACAAATCACTGAGTCTCTAGTTAGATTTATACTCCTAAAATTTGCCATTGAGAGAATTTTAAAATTGAATTCTCAGTTGCATGGTTAAGAAAAGCAGTTAAATATTTTACTGTTTCGTTAAGGGCTTTTAAAATAAATCTGGTAGAGGAAAGGAAAACAAATACCTGTGTATACAGTCTGTAACCATGAAGAGCCACAAAGAACGGAATCAAGTTTCACACAGAACAGGCAGTTTCTGAAACAGGTGCATTGCACTTACTGCAGTTATTGGTGCAAAGCCGATTTACCAGTGAGTAGCTTTTTCTTAGATATACTCCCATCCTCATATACGTTTCCTTGTTATCATTAAGTAAGCATTCTGTACCTTCTTCAATTCTGTTGTAAATGCAAAGGAAGTCAAAAGGGTTCCAATAATCATAACTTCTGCATTACAAGTTGTGTTTAGATGTAGAACTAGAATATACAGGATAAATGCAGATGGAGAGAAATAATAGTACCAGGCTTCTAAATACGTCCTACTTTTGTAAAAAGAAAAATGAGGTATGGAGAAAAGAGTTTCACCTTTGTTATAAAAACTCAACTAGGGTCAAGGTAAACAGTTAAATTTAAATAGTTTTCTTGAAAAAAATGATTACAATTTAAAATCACAGAAAACTCATTTAATAATACTAAGCATACAGGGAATCAGTTCTCTTAGCAGTTATTGTGGTTCATTTCACTTAGGCAGATATTTTTAAAAGTACTCTATAGCAACAGTGAAAGCCCTCCCTCACCCTGATAGGAATGGATTTGTTATATTTCTGCTAAATAGAATTAACCATCCCTGGAAAGATTTTAATCCTATATGGAATTGTTTATTCCATATTATCTATTGTAATGTATTGTAAGTAGTCAAATTCTGTATATACTGCTATTTTCTGTGTCTGTTCATTGTTGTGAACTTATGTATATTAGTGAAATAAATTTTCAGCTTTCATGTTGTTTCCTTAACATTTATATAGTATTAATGTGTTTTTCCCCTCTTATATGAGACATATTTGGTGACTTTTTCTGATGTGCAGCCCAAAGAGCTAGCTGTTCTGAAAAGGTTGATGTTTGCTGTTAAGGCAGAATGAAATTACTCTCTTCATCTCCTAAGTGACAGACCCCTGCACTGTTGCTGTTCAAAACACATTTTTTTACTTGCTATTCACAACTTTTGTACCACCACCAGTCAGTAATTTTCCAGGTGCCTTTATTTTTAGACGTTATAGAACTTAAATACTGAGTGAAGAAAGTTTATAAAATATAAAACATTTTCAGCTCAGC EMBV3_23196 TGTTATCCAGGCGCTGGATGGGGAAATGCGATCTCCCTGGAGTTTCGAAATCTGGCTGAG Variant GeneID:281767|FDFT1:NM_001013004:5_cdna 298^481 1 EMBV3_07849 GeneID:281767 8 GENE FDFT1 MGC134482 farnesyl-diphosphate farnesyltransferase 1 EMBV3_31886 CCTACATCAGAAGTCACTGAACTCCCAGCCTGCAGCTACTGTGGAGCCCGAAGGATATTT Gene GeneID:507032|PDCD2L:XM_002694924:3_cdna Constitutive 3 NULL GeneID:507032 18 GENE PDCD2L NULL programmed cell death 2-like EMBV3_17676 GAAGCTCTTCTTCTAGGGGTTTACAATTTGCCTTCCAGCATTGGGTCCATGGCTCTGACG Variant GeneID:540584|LOC540584:XM_002686713:56_cdna 334^414 1 EMBV3_34405 GeneID:540584 4 GENE LOC540584 NULL similar to family with sequence similarity 126, member A EMBV3_42708 AGCTTGAGGCTGCAGAAAAGTTTGGAAAGAGAAGGAGGGCTCGTGTGGGTTTCACCTCCA Gene GeneID:100337045|LOC100337045:XM_002689791:28_cdna Constitutive 0 NULL GeneID:100337045 8 GENE LOC100337045 NULL cell division cycle-associated protein 2-like EMBV3_17013 AGGGGGCGGGGATTGATTCTGAAGATCGCTGAATTCAGGAACACATTTACAAGGATTTTG Gene GeneID:540060|TWIST2:NM_001083748:14_cdna Constitutive 0 NULL GeneID:540060 3 GENE TWIST2 MGC151849 twist homolog 2 (Drosophila) EMBV3_34138 CAGACGTGGTGGGGCGAGCCAAGTTAATTGTGTGGAATGGACCTGTAGGCGTATTTGAAT Gene GeneID:538592|PGK2:NM_001123035:323_cdna Constitutive 0 NULL GeneID:538592 23 GENE PGK2 NULL phosphoglycerate kinase 2 EMBV3_03732 TGTCACAGTCGCAGTGCTGCCCTTCCTTACCTTCGCAGGCGTGTACAACAATGAGCTGCA Gene GeneID:281208|NPBWR2:NM_174075:715_cdna Constitutive 0 NULL GeneID:281208 13 GENE NPBWR2 GPR8 neuropeptides B/W receptor 2 EMBV3_04023 CAAAGGTCTATTTGAGGTCCGAGCCCAGGAGTACCTGGAAACACTTCCCAGCGGAGAACA Gene GeneID:512632|DENND2A:XM_002687070:220_cdna Constitutive 0 NULL GeneID:512632 4 GENE DENND2A NULL DENN/MADD domain containing 2A EMBV3_16810 CCTCACAGCCGCCAGCCATATAGAGCCTTCTAATAGCCCCTGGCATACTCCTATTTTTGT Gene BVV0102_088840 - 1 EMBV3_29585 GK000001.2:12796183-14790589 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19170 ACATGGTCCACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTCCCTTGAAAGCCCC Gene BVT0102_211195 + 0 NULL GK000024.2:14347227-14621364 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252199 TCONS_00202283 TCONS_00008643 TCONS_00080564 TCONS_00090676 TCONS_00108173 6 XLOC_155140 XLOC_123928 XLOC_004200 XLOC_049448 XLOC_055456 XLOC_064081 NonCoding TCONS_00090676 XLOC_055456 NonCoding NonCoding - 18:49800691-49801514 - TSS68022 823 2 TCONS_00090676_2 55 0.86269744835966 1 0 0 0 0 0 0 0 0 0 9.58704640967001e-06 2.49969236318414e-06 0 0 0 0 0 0.00112321672954177 0 0 0 0 0 0 2.78677696414441e-06 0 0 0 0 0.000361799285622004 1.17973671770352e-05 0 XR_229055.1 LOC101903110 PREDICTED: Bos taurus uncharacterized LOC101903110 (LOC101903110), 1e-100 370 87.66 0.370595382746051 0 noncoding GGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCCCTGACTCGATGGATGTGAGTTTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGTATGCTGCGATTCATGGGGTCACAAAGAGTCGGACACGACTGAGTGACTGAACTGAACTGACTGAATCTGCCTTGATTCATGGACCTAATATTCCAGGTTCCTATGTAATATTGCTCTTTACAGCATTGGACTTTACTTCCATCACCCGTCACATCCACAACTAGGTGTTATTTTTGCTTTGGCTCCATCCCTTCATTCCTCTGGAGTTATTTCTCCACTGATCTCTTGTAGCATATTGGGCACCTACTGACCTGGGGAGTTCCTCTTTCAGTGTCCTATCTTTTTGCCTTTTCATACTATTCATGGGGCTCTCAAGGCAAGAATACTGAAGTGGTTTGCCATTCCCTTCTCCAGTGGACCACATTTTGTCAGAACTCTCTGCCATGACACGTCCATCTTGGGTGGCCCTACGTGGCATGGCTCATACTTTCATTGAGCTAGACAAGGCTGTGGTCCATGTGATCAGTTTGGTTAGTTTTCGTGATTGTGGTTTTCATTCTGTCTACCCTCTGCTGGATAAGTTACTTAGAGTTTTCTATAAACACAGTTGAGACATGTATGAAGTTCATTTTTCATTTTCATTTCCCTTTGTTTCCTTCACTTCCCTTATTGCACAGGTTAGGAAGATGACAAAAACAGAAAGATATCCCATGTTCTTGGATTGAAAGAATCAATATTGTTAAAATTGACTATACTACCCAAGATAATCTA TCONS_00086596 . 3' 6814 TCONS_00086596 . 3' 7636 EMBV3_27403 CTCCGCAAGGGCGGGGAAGACCGCTTACAGACATTCTGGATAACAGCAAGATCATCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41561 GGTGACCTGTTCAGTTTGCTGCTATCTCTTGTCACGGAGAGAACTCCTCTAGATGTAAAA Variant GeneID:338075|ATP6V0E1:NM_001034050:109_cdna 207^336 2 EMBV3_43500 GeneID:338075 20 GENE ATP6V0E1 ATP6V0E MGC128729 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 EMBV3_37478 TCGGCACGGGCGTCTGCGGGAACAATTCCAGCTGCTTTCTTGGGGACAAGCGTTTTTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26375 CCACAAACAGACCGTGAAGATGCTGGCTGTAGTGGTTTTTGCTTTCATCCTCTGCTGGCT Gene GeneID:514203|GHSR:NM_001143736:16_cdna Constitutive 0 NULL GeneID:514203 1 GENE GHSR NULL growth hormone secretagogue receptor EMBV3_08227 GCTTTACCCAGCTGTTCTTTCAACTGTCATCCACAAAAGAGACCAGGTCTGAACCAAAGC Gene BVT0102_103759 + 0 NULL GK000005.2:89177132-89217218 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39053 AGCTCCAGCCTTGGTTATGTGGCTGATGCAGTCCTGAACTCCTAATCACTCTGTTCAAGC Gene BVV0101_025278 + 1 EMBV3_36054 GK000008.2:79504471-80053310 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31107 GCTCTGGCAAAGTCAGACGGCTGGACACTTCCTGCAGAGCTGAAACTCTTAATTTGGAAC Gene GeneID:513397|DNAJA3:NM_001080270:147_cdna Constitutive 2 NULL GeneID:513397 25 GENE DNAJA3 MGC143373 DnaJ (Hsp40) homolog, subfamily A, member 3 EMBV3_16764 CAAGCGCTCACCTCTGCCCTCCTGAATTAGTAAGTGGCACCTGTCTTTCCCCCTATATGT Gene BVT0102_291264 + 0 NULL GK000016.2:42502470-42537918 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22337 GACCAGGGATTGGAAACCGTGTCTTCTGCATTGGTAGGTGGATTCTTTACCAGTGAGCCA Gene BVT0102_195820 + 0 NULL GK000022.2:51200327-51250980 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128999 1 XLOC_077995 Coding TCONS_00128999 XLOC_077995 Coding Coding - 22:51250215-51253871 - TSS96051 1203 3 TCONS_00128999_2 61 0.325852036575229 2 0.67140902872777 0 0 0 3.4514385330694e-06 0 0 0 0 0 3.42019474488139e-06 1.5223161554398e-05 0.000332898254058123 6.43979414847846e-05 0.000175960144404628 0 0 0 0 0 0 0 0 0 9.75496887548098e-05 0 0 0 2.39530099266812e-05 6.05311040872172e-05 0 NM_001076443.1 UBE2F Bos taurus ubiquitin-conjugating enzyme E2F (putative) (UBE2F), 1e-109 401 82.70 0.322527015793849 NM_080678.2 UBE2F Homo sapiens ubiquitin-conjugating enzyme E2F (putative) (UBE2F), 3e-104 383 81.57 0.325020781379884 TCONS_00128999_1 sp|Q1RMW1|UBE2F_BOVIN UBE2F_BOVIN NEDD8-conjugating enzyme UBE2F; 5e-23 88.6 73.08 0.864406779661017 1 noncoding GAGAGTGGTGCCTGGAGAGGGAATGGACCACACCCCTTCCCATGCCTGGCTCTTTGTATCTCTTCTTCTGGCTATTGATGGCTGTCACTCCGGATAAGGGTTACTACCAGGGTGGCAAATTTCAGTTTGAAACTGAAGTTTCTGATGCATACAACATGCTGCCTCCCAAAGTGAAATGCTTGTCCAGGATTTGGCACCCCCAACATCACAGAGACAGGTGAAATACCCCTAAGTTTACTGAGAGAAAACTCAATGTTCTCAACATTTTTGGGGCACTGGCTGGACTCCCACGAGGACACGGAAGGATGTTGTTTGGGGATTAAACTGTTTACTAATATTTTGAGTTTCGATGATCCACTAAATATTGGAGCTGCAGAACATCATTTGTGGGACAAGGAAGACTTCCGGAACAAAGTTGAAGACTACATTAAGTGTTAGGCCAGATGACAGGAGTAGCAGACTGCAAGGCCATGGATCGCGCATTAAGAAGTTTATCTCCAGGCTTCCGCAGTGGCTCACTGGTAAAGAATCCACCTGCCAATGCAGAAGACACGGTTTCCAATCCCTGGTCTGGGAAGATCCCACATACCAAGAAGTAACTAAGCCTGTGCACCAAAACTACTGAGCCTATGCTCTAGAGCCCAGGAGCCACAACACCTGAGCCCACACACCGCAGCTACTGAAGCCCGCTCGCCCTAGAACCCGCGCTCCGCAACACGAGAAGCCACTGCGATGAGAAACCTGCGCACTGCAACTAGGGAAAAGCCCGTGCAAACAGTGAAGACCCAGCACAGCCAAAAATAAAAAAAATCATATATTAAAAAAAAAAAGAAGTTTGCCTTCAAACTTGGCAATCAGAAACACGCTCCAAACTGTGATTGCACGCAAATTCTTTTTGCTCCTTCCACGAATGTTGGTCCTGCCTAGATGTTATGAAGCCTCCCAGAATGCACAGTAGATCCCTTAATGAAATGCATATTTTATTTAAGTATATTTTGGGACAGATTTGTTATTTGTAAAATTTTACACTGTATTTGTTTTTTGGTTTTCATTTAGTTTGTATTTTCATTGTATAGTGCAGACAGAAAGATGTTAGGTCAAGCAACTTTTTTGGGGGGAGATTAAGCAACTTTTGAGAAAGAATACAAAAAAATATGAAAGGCAAAAAATAAAAAGAGTGTATGTGTTCTCAAAATAAAAAAC TCONS_00127192 TCONS_00127193 r 5' 2700 TCONS_00127192 TCONS_00127193 r 5' 166 EMBV3_41062 GGGCATCTGAAAAACTCTTATCTGGGAGATGATGTAAGATTCCCACAGAGTTACCTGGGC Gene BVV0102_243339 + 0 NULL GK000012.2:51941108-52350608 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037011 1 XLOC_021279 Coding TCONS_00037011 XLOC_021279 Coding Coding KCTD12 12:52346168-52352329 o TSS26810 6161 1 TCONS_00037011_1 326 1 0 0.000750803127685828 0.00125030323095159 0.000346246925162979 0.000542783262747011 0.00054731333824912 0.000289696439171207 0.000559013810612585 0.00060559414734834 0.000676455937623258 0.000164781397916046 4.34726079046786e-05 8.70560058540935e-05 2.63296721423979e-05 8.39862709175072e-05 0.00019579225049009 0.00200804189372489 0.00186169792447084 0.000810041055301002 0.00070522156440991 0.000603219214448827 0.000189904121876659 0.000958700580640673 0.00120464074823802 0.00134903450343142 0.000831820623602192 0.000462979835889254 0.000619688659544706 0.000324338533061914 0.000196955043651171 0.00028533614876159 XM_005213872.1 KCTD12 PREDICTED: Bos taurus potassium channel tetramerization domain containing 12 (KCTD12), mRNA. 0.0 1.108e+04 100.00 0.997240707677325 NM_138444.3 KCTD12 Homo sapiens potassium channel tetramerization domain containing 12 (KCTD12), mRNA. 0.0 4904 77.88 0.999837688686901 TCONS_00037011_1 sp|Q6WVG3|KCD12_MOUSE KCD12_MOUSE BTB/POZ domain-containing protein KCTD12; 0.0 580 97.25 0.996932515337423 1 coding 0 0 0 0 0.10930970574733 0.604268282600297 -0.0258843656065634 0.724126981123462 ACTCCCCTGGAGCGCGCGGGCGAGGCGGGCGGAGCGCAGCTGGGCTCGCGGGGGCGCACAGCGGCGCGCTCGCATCGTGCGCTCGGCTCCGCGCGGCTCTCGGCGGCAGCCAGGGCGCAGGGCTGAGCGAGTGTCCGAGAAAGGCGGCGGCGGCGTCGGCCCCGGTCACCTCTTGGCCATGGCTCTGGCCGACAGCACTCGTGGATTACCCAACGGGGGTGGCGGCGGCGGCAGCGGCTCCTCGTCGTCCTCGGCGGAGCCGCCACTCTTCCCCGACATCGTGGAGCTGAACGTGGGGGGCCAGGTGTATGTGACCCGGCGCTGCACGGTGGTGTCGGTGCCCGACTCGCTGCTCTGGCGCATGTTCACGCAGCAGCAGCCGCAAGAGCTAGCCCGGGACAGCAAAGGCCGCTTCTTTCTGGACCGAGACGGCTTCCTCTTCCGCTACATCTTGGATTACCTGCGGGACTTGCAGCTCGTGCTGCCTGACTACTTCCCCGAGCGCAGCCGGCTGCAGCGCGAGGCAGAGTACTTCGAGCTGCCCGAGCTCGTGCGCCGCCTCGGGGCGCCCCAGCAGCCCGGCCCCGGACCGCCGCCGCCGCACTCCCGGCGCGGGGTGCAGAAGGAGGGCTCGCTAGGCGACGATCTGCTGCCGCTCGGCTCCGCCGAGTCGGAGCAGCAGGAGGGCGCCTCGGCCGGGGCGCCGTCGCCCACGCTGGAGCTTGCTAGCCGCAGCCCGTCCGGGGGCGCGGCGGGCCCGCTGCTTACGCCGTCCCAGTCGTTGGACGGCAGCCGGCGCTCGGGCTACATCACCATCGGCTACCGCGGCTCCTACACGATCGGGCGGGATGCGCAGGCAGACGCCAAGTTCCGGCGAGTGGCGCGCATCACCGTGTGCGGCAAGACGTCGCTGGCCAAGGAGGTGTTCGGGGACACCCTGAACGAGAGCCGGGACCCCGACCGGCCCCCGGAGCGCTACACCTCGCGCTATTACCTCAAGTTCAACTTCCTGGAGCAGGCCTTCGACAAGCTGTCCGAGTCGGGCTTCCACATGGTGGCGTGCAGTTCCACGGGCACCTGCGCCTTCGCCGGCAGCACCGACCAGAGCGAGGACAAGATCTGGACTAGCTACACCGAGTACGTCTTCTGCAGGGAGTGAGCTCCCCGCTCCCCCTGGCGACTCCAGCGCGCCTGTTCCCTCCTCTCCTTTTTGCCCTGGAGGGGACTCTAGATTCCCCCTCCGACCCACCACGTTCTCGCGTTCCCCCCGTTCCCCACCTCCCGTAGACCCCCTGCCCCCTCACTTTACAGGCTGCAGCCGCAGATCCTATCGGCTTCTTCGTCTTCTCCGGACCCCAGTGAAAGAGAGCCCAGACGTACCCCTCCACCCCATGTTTTCTCTGTCCCCGGCCCCAAACCAACCCTCCCCTCGAGTTGTCCTTCAGTCTGGATCTAGTGGGGGGTGGGGCAGTGTGGCCACAAAGCCACAGAGTAGCCGGGAATGACTGAATTGTTCGACCCTGATTGGACCCTGTCCACTTGTGTAGAAGATTCCTTGAAGTCTTCTCAAAGCCCTGATGACTCACTCGCGGTTTAAGAGACTTGGTAGCACTCTGGAAATAGTTTAGTTTCGAAAGGTCATTCATTACGCAGTCTTTTGACCTTTAAAGGTAGAGTTTTAGAAGTCTGAACGGAGGACTCCGGAGCCGAGCCGTAATGAGTTCAGTGCGGAGATAGTTCAGTGACTACACGTGAAGAAAGTTCGGAACGGTTACAGGTAGAAGTAGAAGAATCTCGTGCTGGCTCTACGGAGGAGCCTCTGGTTTCCGTGCCGATTTAAAGATCTTCGCCTGTGGCTTAAACTTGCAGGAAGTTCCCCTCCTGCCTGAGGAGGCACCCTTTCTCCTGGGCTCAGCGCCCGAAGCCCTTGGTTTTCGAGGGTTTTCGACGGCTTGACATGGCAGCCTTTATTGGCAAGACGGGGAAAGAGAGCGTGACAGCCCAGGTCACCAAGCACTGCTGTGACTGTAAACGGAGCTGGGTGGTAACGCACGTCGTGGGTGTTAGGAAAGCCCGTATTCTTGCAGTGAATGGCAGTAGTACCTTAGTTCTTAAGACTTAGGGGGTAGGGTGGGGAGGGAGGAAGGAGAAGGGTAAGAAGGGTGGGAAATGGGGGGAGCAGATATACTCATTTATTGTTGACAGTTGGAAGTTTGTACCATCCGTCTGAGTATATGCACATTTACAAAATAGCAGGCAAGAAACAAGCAGAGCGTTTTGTAAAGATCAATCACAGATCTCCTCTTACCTGGCAGTTGATTGAACTAACTGTTTTGAGTCCTAAACTTAGAAGTTACTGATACTTATATAACCTAACCAAAGAGTTACCCAGTAGGGTTTTAGTTTTTGAACTTTTATTTTCTTGTTGATTATAAGTCCTGATTTTAAAATCTGTTACCTTGAGCAAAATACGTTTGAGTTACTTAGATTTAGTTTTCTTATTAAAAAAATCTTTATTTTCTCCAAGCCCAGCCAATGTTGACTTCTGGGCAAACCTGAAAATGCCCTTTTGATGCAGGTGGTTTGAAGTGAAGGTGAGTCTTTCCAAATGACAGAGCTTCAGAGAAGCAGAAATGCTGAGGGCTGCCATCTGTAGATAACTGGAAAGTGGGAATATTTTTAAATGAAGGCAAATAAGTACTTCAAAGTGAGCTAGCTGAGCAATAAAATGGTGTCCCAGGTAAATGCAGCTGAAGCAGAAGGAGACCTGGTTGCCTTATACTTTTACTCTACCATGGAATAAATCCCCACTGTATATCCTATCTACACTGTAAGTGAAGGGAAATGAATCCTTGTCTTTCATGCTATGAGGCTCCTTTGGATATTCTGTGATTAAGGAGAAGCCTTTCCTTTTTCATTTGTTTCAGCATCATTCTCTGAAGTATGTTTTTAAAAGATTTTGTAAGAGTCTTTTCAGTGTTGAAATTAGCGCTATTTTTTTCTTCTTTTTAAAAATGAATCTTGTACTATATCTTCCTATATGTCCGTAACAGATGTTAAGAATTGAAACAGTTTTATTCTTAGCCTCATGTGATCCAATCTGTATATACCATATATAAACATTTTACACGAATCATTTAGTTTTTTAATTCATTTACTAAATGCTATAAACTTTCCTGTATTTACCCTAGTAACTTGCATCAGATGGTGTATATACTAAAGCAACATGCTTTGATGAGTTTCTTATATCCTTGTCTATGGGGAAATTGGGTTAGGAAAAAAATGCATAATTATAAAGCTGAATTTGCTCCATTCTTTTTGCGTAGCTATTAGTTGTATTCTAATATGTTGATTAACTGTCTTTGTAAACCAAGGTACCTGCATTTTTAATCCACTAATTCTTTTCTTTTTTTATTGAGGGAGAGAAGGACTTGAGGTCTTTCACTGGAGGTTCATTTTTAGAAAAGTACAGTTAGCTTTATATACAAAGACTGTAATTTTAAAGGAAGCAGAAACAAAATCAGAAAGTCACATTGCTGGTGTTGAGTATGTTCTCGGACTAGGTAACGCATTAGAACATACCCCTGTTTCAAACCTGAAATGATTTAGGAATGTCACCTGCTGGCCAAAAGTGAGTATCACAGAGATTTCTGTACCCCATGTGCTCTTCTGTATTGTGCAACACAAAGCAGGTAACTGAGAACGTCTTGGGGACAGATGAAAGCCACTGACATATGGCAAGACTCTGAGCTTCTGATTTTCCTTGTTAAGTCTGCTCAACTCCAGGAGTCATGGGAAACTGGTCGAGTTTTGTCTCTGCCACTCAAGTCTAAAAAGTTTTATCTTGTAAAACTTTGAGTTGACTGTTCCACTGCTTGGCAAAATTTTCTCCTTCCAGACATCCCTGGTGGCCTGAAGGTCTCCCCTCCTTCTTTCATTAGCTGAAAAACTGGGAATTGAACTGTTAGAGACAGTAAACTGACCTCTTTTCGTATTATAACTGTCCTCTCTAAAGTTGGAAGTTGATACGTGAAAAATTTTATCTTCAACCCAAAGTAAAGGCTGGGTAGGAAACTCATGTTTCCCTTGGGTGGACACTGAAACTGAGGTAAGATGACTTGGCCACTGCCCTTTTGGGTCCCTTATTCACCATGTGCTTTGAGCCATGGAAGGAGCCTTACTGGCCTACATCACGGGCTGGGAGTGTTGATTGTCATCTGTAGGTTGGATGAGATTCTGAGGGTATGTGTGAGTAAGCCCTCCAAAGACAGTCAGGAACTTGGAAGAGTGTCATAAATTATTCAGAAATTAAACTGCATTCATCTGACTCAGTGCAGTATGTATTTACATATGTAATGGCTCAACTACCATTTGGTCCATAAGTATTACTGAGATTTTAATAACAAATTTAACTTTTTGAAAAAGAATAGTTGACAGTGGTGGTTAGAAAAACAGGTACCATGTCCAATGCTTTTGCACCAAGAGTTTGACAAATTGTCTGTTTTTTAATACATGTAGAACTATGATCCATGCTCATTTTAGTGTTTCAGATTATGTGTTTTGGAAAATACTCCTTGAGTGTGTGAAACTTAAAATTTTTTTCCCTTTCCAGACGATTTTTATTCTTGTATTTTATTTGGTTTTGGTGTTGATAGCAAAGTAATTTGTATTAATACTAGCCCAAATTGTCTTCTCTTTCAAACCAGATCCGTATATATATGTATGGCCTGTTGCTTCTCTGGGGAAATGCATAATCTGAATTCTCAGACAAAATGGGCAACTGGCAGTGCTCATGACACATTTCCATTTTTATTCGTTTTTTCCTTGTAATGTTATTACATTAAAGCCATGTAAGTTGAAGCTTTGATAATTTTTTACTTTTCAAATTATGGTAAATTCTAATCTAATAGCCAAAAAACAGTTTTATACTCCACATGGAAAATGCTAAATGATAGTGCAGGTATTTAGAAAAGTATTGACTGGGGTTGAATTCCCTAAGAATTTCTTTTATAGTCTAAATCATAAGTACTTTACTCAGTTGACTTAAAATTTTTATTGTAAACTGAATGTTTTTATTCTAAACCTACCAGAGTAAATTCTTTGGATTTTTTTTTCTTCTGTTTTTCCTTATTATAACTCATTTAAAAACTGAATTAGTTTTCTTAGATGACCTAAATCTCTCTCTTGAGAAATAAAATATTCTTCTGTTTCCAGTGGCTATGGTACCTAAAATAAGCCTTCCTAAAGCCAGAAACATGCTATGTTGAAGTTAACTTTTCTTCACAATTTTGGACAATAAACATCTAAAAGGATTAATGTTTGAAGATTAATATTCTCTACTGGGACCCTTGAAACTTTGATGGAAGAAATTCAACCAGAATATTTATATTACAGTATAATCTCGTGTGGTAGGAAGCTGAACTAGTTGATCAAGAATTCTTGTCACCTTAGACATTTTGTGATTTTTTTCCCCCAAGTTTTTTAAAAAAATTTAAACGTGTTTTGAGGTATGTGGACATAATTGTAATGTAAGCTATTATACAACTGTCTTTGTGACTTCATAGGCAGGTGAATTTTGCTATTACTATTGAATACAAATGACAATTCATTTATGATCACTCAAACAGCATATGTGACATTTAATGACAAAGGTTAAAAATATCCATTATGTATGTTAATTTTGAAGTTATAAATAATGTGTTGTTTAAGTTTTTCTGGGCATCTGAAAAACTCTTATCTGGGAGATGATGTAAGATTCCCACAGAGTTACCTGGGCTTATGAAATTGTTGAACATGTTAAATGCTCAGTGATATGGATCACTTAGCCATTTCCTCAGTGATTGAAGGAGAAAGGGGGAAAAAAAAATCATCATACAACTACCAGACTTTCTAACAAAACAGAAAGCCAAGGAAAAAACAATCGTTCTATATTTTAAAAACCGACGAAGTTCTTTTCAGACATGCCCAAACTTAAAGTGAGAATTTCTTCAACCATCTAAATGCTCTAGAAATTTTGTTCTCTCTGTTCACAACCAGTTGTATAACAGAAATACTCGATGCTGTTTTCCTCCCTGTGTGTGAAGTAATGAATCATTGATTATGTGACTTGTTATGTATTCTATTAAACACTAAAGAATAAAACATCTACTCCTTTAATTATT TCONS_00037012 s 5' 0 TCONS_00037012 s 5' 0 EMBV3_15471 CTGAAGACCTCCAGGAACCCCTGAAGCCTGATTTCTTTCTGCCCCTGAAAACAGATAGCA Gene GeneID:521475|FGF19:XM_002699438:135_cdna Constitutive 0 NULL GeneID:521475 29 GENE FGF19 NULL fibroblast growth factor 19 EMBV3_10431 GTAGTGACCAGAGAAATGCCCAGGGTTGGCTCTTCAGCACAGACCTGCATACTAGATGTT Gene BVT0101_023984 - 1 EMBV3_08666 GK000002.2:122980400-123070707 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103689 TCONS_00103690 1 XLOC_062187 Coding TCONS_00103690 XLOC_062187 Coding Coding NKAIN1 2:122969520-122981656 j TSS76958 2444 1 TCONS_00103690_2 163 0.160801963993453 7 0.79917593737124 5.44238068891554e-05 0.000501596749000741 7.95123154631724e-05 0 5.67028779701232e-11 3.5583210571574e-11 0 2.68037654574201e-05 7.6028480312155e-11 3.59066371237421e-11 2.24299158853225e-06 0 3.46272014766527e-11 4.49589286622081e-11 8.31843149886952e-11 0.00353342164905408 0.00143333478843361 0.00075742977253143 4.99468207581855e-05 2.14554798412803e-05 3.64537636402253e-11 0.00051314896622654 7.21716957622855e-05 0.00062420639655949 6.14408180744027e-11 0.000288274188525595 7.19191376672773e-05 0.000208293199350604 3.92071428639279e-05 2.41591904481507e-05 XM_002685664.3 NKAIN1 PREDICTED: Bos taurus Na+/K+ transporting ATPase interacting 1 (NKAIN1), mRNA. 0.0 2331 100.00 0.52823240589198 NM_024522.2 NKAIN1 Homo sapiens Na+/K+ transporting ATPase interacting 1 (NKAIN1), 0.0 1700 76.13 0.960310965630115 TCONS_00103690_2 sp|Q9D035|NKAI1_MOUSE NKAI1_MOUSE Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1; 9e-118 336 100.00 0.993865030674847 1 coding 0 0 1 1 -0.0281257672667535 0.806845501692631 0.00404894732648155 0.933699542475176 GTGCCAGGCATGGCTCTCGCCGCTGGAAATGCAGCAGTGAACATCCCCACTCTCCTGGAATTTGCTGTCTAATGCAGGAGATGGTAAATAATGAGTGGCTGCACTGGAGCGGCAGATCTTTGACTTCCTGGGCTACCAGTGGGCTCCGATCCTAGCCAACTTCCTGCACATCATGGCAGTTATCCTGGGCATCTTTGGCACCGTGCAGTACCGCTCCCGGTACCTCATTCTGTATGCAGCCTGGCTGGTGCTCTGGGTTGGCTGGAATGCTTTTATCATCTGCTTCTATTTGGAGGTTGGACAGCTGTCCCAGGACCGGGACTTCATCATGACCTTCAACACATCCCTGCACCGCTCCTGGTGGATGGAGAACGGGCCAGGCTGCCTGGTGACACCTGTCCTGAACTCCCGCCTGGCCCTGGAGGACCACCATGTCATCTCAGTCACCGGCTGCCTGCTCGACTACCCCTACATTGAAGCACTTAGCAGTGCCCTGCAGATCTTCTTGGCTCTGTTTGGCTTCGTGTTCGCCTGCTACGTGAGCAAAGTATTCCTGGAAGAGGAGGACAGCTTCGATTTCATCGGCGGTTTTGACTCCTACGGATACCAGGCGCCCCAGAAGACGTCGCATTTACAACTGCAGCCTCTGTACACGTCTGGGTAGCGTTTGCCCCACGCCCACCCCCGCGGCTAGACTGACCGCCGCTGCCGCGAGCTCTGGCCAAAATGGCAGGCGCGCCCCCTGGCGGCTCCCTGACTGACTGCAGCCTGAGCCGGCTGGATCTGGGTCTGAAGCGGACTTGGACTTGGCCCTTAGCAGCCTGGACTTGAGGGGCGGGGCGGGGAGCGGGGTGTGGCGGGGAGAATCGCGGGGTTTGTATTTTTGTTTTTTTAATCTCAGCCTTGACGTGTGCGGGAGACTCCCCCGCCCTTCTCCAGCCTCCCCTTCCTCCCTTCTTCCCCCAGCATCCTGTCCCCTGTCCAGAGGGAAAGGGCAGGAGAGACACACACACCCCATCTCGCCACATTTATTCACCAGCCCTGAGGAAAGTTCCCCCGAACCATGAAGAGGAGGAGTCCTGGGTTCTAATCTCAGCTCCATCACTAACTCTGTGTGACATCTGGCAAAGCCCTTGTCTTCTCTGGGCCTTAGCTTCTCACCTCAAATAATTAAAATAATCCCTTAGTAAATGGAGCTCTTCCTAGCCTTTTCATTTGACTCTCAATTCTCTGGACTATACTGGGGCTTTGCTATAATCCCCATTTTGCAGATATGGAAACTGAGTCCCAGAGATGTAAAGCGATTTGCTTGAGGTCACACAGCTGGGCTTTTGGTGGAGGCAGGCCTTGAATACAGTATATCATCTGTAGTTTCGGACTCCAAAACCCAGTGTCCAGTTTCTGAATTCCGTTTCCAAGCCCCCTTCCAACTTGGACACTCTAGAACCCATATGGCATACACCACTCTCACATACCACCACCCCCACTTGCCAACGCCTCTCTTAAAGCAATATACCCGTTCTCTTGCTGGACACGGGATGGACAGATCCCAGAGCCCTGAATTCAGCCTGACCGACAGGGAAGCCTTCTTAGACTCGGCCTCTGCCCACCCTTGGCAAAGCTTTCGAGCTTTCTCTAGCAAAGGGGGGACACAACCCCATTGCCCCAGTCCCTCCCAGGTCCCTGAGGCTGCTGCACCCATGACCCCTCACCCCCTCAGCAACTTTGCCAACCTCTAAGGACACCATCCACTTCATCTGGTGAAAGACCAGTGGTTCCAGCATGGAAAAGGGCTCATCTGTGCTGCCCAGCCACCAGTGTTGAAAGATCACCAGCATTCATGATCGTTTCGGTGTCCAGAAGCAACTTCTAACAACCCCAGAAGTTGTTCCAGAGAGGCAGAATGGGGGAGGGATGCCGTAGGGGAGATGGGTCTGGAGGGCCAGCACCCTTCCTTAAGAGCAAGTCGACGTAAGGGCTCAGTCTCCTCACCTCCCTCCTCAGACACCTCTGAGGACCCTGCATCCCGTGTGCTGGCTGGTGAATCCAAGGGCAGGAAGATTGGGCCTCGGCTTCCAGTTTGTGAAACAGGAGTGGCTCCGGCTTAGGAAGGCGGGTGGGAGGCCCAGGGGAACCAGGTGGAAGTACAGACGGTCGTACACCTGAGCCCCTCCATGACGACCATTCCTCACTCTCCACGCGCTGATCTGCCATCCCCTCCTGTCTAAGGCCAAAATATCCTGAACTCGGATCCCACCCCAACATCTAGTATGCAGGTCTGTGCTGAAGAGCCAACCCTGGGCATTTCTCTGGTCACTACGGGACCTGAGATCAGCCCTGGCCAGCTACAGGTGCAGCTCAAGAGTGTGATGGTTCCCTCCGGCCTGGCTGCTGCTCTGCCCCTGGGCCAACTCCTGCCTCCAGCCCTCTCCTCCCACCCCCAG EMBV3_28854 GCCAAAAGTAGGATTCAAGGGCCTCAGCCAGTTCCTGGAGAGATCAAGTACAAAACCTGT Gene GeneID:513423|SLC25A21:NM_001015587:17_cdna UTR3_Alt 2 NULL GeneID:513423 21 GENE SLC25A21 NULL solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 EMBV3_40369 TGCACTCACACGACGTGCGCTACGGATCAGGAAGTGAGTGCTTTTGGTGAGGAAGGTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06453 GAAAAGGACAATGAATGGAAGTGGGAGGATGGTTCTCTTCCTTCTGGCCTCAAGTGGCGT Gene GeneID:444861|KLRJ1:NM_001002884:8_cdna Constitutive 0 NULL GeneID:444861 5 GENE KLRJ1 Ly49 killer cell lectin-like receptor family J member 1 EMBV3_10698 CAGAGTGGGCCTGAACAATGGGACATTTTGAAACTTGCTGGGAGCACTGAAGAACTTGGG Gene GeneID:100138700|LOC100138700:XM_002694093:363_cdna Constitutive 0 NULL GeneID:100138700 16 GENE LOC100138700 NULL similar to envelope glycoprotein EMBV3_15123 AGTGACACCGCATGGATGGAGAGCTTGGGAGCGGAGTGTTCTCAGCACTGGAATCTCAGT Gene GeneID:510943|CCDC88B:XM_002699330:179_cdna Constitutive 0 NULL GeneID:510943 29 GENE CCDC88B NULL coiled-coil domain containing 88B EMBV3_43362 CCCTACTGTGCAGCGTGGTCCCAGATTAGACCTGTGTCCTCTTTACACCCGGAGGAGGCA Gene BVV0102_180161 + 0 NULL GK000005.2:30060681-30070403 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194496 1 XLOC_117764 NonCoding TCONS_00194496 XLOC_117764 NonCoding NonCoding - 5:30065636-30068207 - TSS145125 2169 2 TCONS_00194496_6 119 0.0299677270631627 2 0.156809338521401 0.000150546984855352 4.63274012588208e-06 1.70659311469028e-05 9.57140838973373e-06 0 1.6491759675814e-06 0 0 0.000116405934917091 3.79391091654383e-06 3.16623102166664e-06 0.000135180323158915 2.11657559214351e-06 4.33748020227339e-06 2.26196164813219e-06 0.000450543431665144 0 1.15679463499121e-05 0 0.000202248721977291 0.000114067299998806 0 0 7.72921465797604e-06 1.70363754708606e-05 0.000237121954237605 0.000116606677026308 1.99277653614971e-05 0 0 NM_172307.3 Mbtps2 Mus musculus membrane-bound transcription factor peptidase, site 2 (Mbtps2), mRNA. 4e-10 71.6 86.89 0.0272014753342554 0 noncoding 0 0 0 0 -0.0370480659569591 0.762184302824295 -0.0580820204410393 0.291862671400028 CGTGGAACCTCTGTCCCAGCTGGCCAAGAGCATGAGGGTGACTGCCTGAAGAGAAAGCAGGGGGCTATTTTCCCAAATAGTTCTTTAAAGCTCTGCTCTGTCAGAATAGACTAGAGCAAGAGACAAGCTTCATGAGAAGTGAGGAATTAGGTTAGAATCTGAAGAGCATCCAAAGTTAGACACAGGAATGAGTAACCAAAGGAGCAGATGATGTGAGCGCAGAGCCTAGGCTGTCGCATCCCCATTGGCTGGCAGACAGCCCCTCTCCATTCCCCACCCCCACTGCCTCCTCCGGGTGTAAAGAGGACACAGGTCTAATCTGGGACCACGCTGCACAGTAGGGGGGCTCCACGGAGGGAGCTCCTGGGACTGAGAGGAGAGGAACAAGACAACTATCCAGAGACGTTCACTTTCCAAAAGAAAATCACTTGGGCCTAAAGGATTCTGTGCGTCAAGGTTTTTTTGTTTCTTAAATAGTAAAGACCATATAAAGATAGAATAGGAGTTGAAAGTTTAAACACGGGCTCCGCTGCATGGACTCTGCCAAGTTACTTCAGGATCCTGAGCCTTAGTTTCCTCATTTGGAAAACAGGGTCTGTTCATAAGGGGCTGGAAGAACCCAATGGGGCCTGACACACAGATCTCATTCAGTGGTGGTTTTCAGCGTAATCGAGGTAGACTGCCATGCCCTCTGCCGAAAAGTTCAGCTGTTTCTCCTGCGGTTTTTAACATGGCCAGGCTATTACTAAAGAAGGGATCACTTTCTCCCCATACACAAGCCTGAGCTTGAATAAAGGAGACAGAGAGGGAATGTGTGTGTGTGTGGAGACAGAGAAGGAACGTGTGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAGAGTGTGTATGTGCTGTGGGACAATGGGGAGGCAGTGAGGAGGATCCCAGAAAAAAGGAGTCAAAAATCAAACCTAAGAGAGAAGTAAGGCCCTCTTCAGAACACAGTGGTGAAGCATTTGGATGGACTGCAGTTTGGGGGAGACTCAATGAAGCAAAGGAGGCTGGGTGGATATAAAGCCGTGAAAAGAGCAGGGCTTTGAGCACCTGGAATCTCATACGAAAGTAAACAAAAGGGGAGCAGCCAAAAGAGCTGAAGCTTTAAGAGGCAGCATAGATCAAAATCTGTGATCTTTAATCTATAATGAGGTCAAGTGATCTGGAACAAGCTAATTGGGGTTTTGATGGGAGACTTTGCTCGGTCAGGAGAGGTGATCAGCTCACCTCTCTGTGAACTGCTCACAATGCAGTTCTCCATGACCTGGAACATGAAGACAGCTCACAATGCAGTTCTCCATGACCTGGAACATGAAGACAGCTCCTAGCAAGAGGTGTTAACTGATAGATAGCCAATGCCAGGCCTCTGGAATGTCAAGGGGAGGACAGGGAGGGACAGAGGGAGGGGAGAGGTTAGGGCTAATCAAGAGGAAGCTTCCGGCCAAGAGGTCACCACTCGGGCAGCTGGGGCAGGGGGTCTGCACAGCCAAGCTCTGTAATCACTTCTCAGGGGGGAGCAGCTACACTGAGGAGCAGTCACATATTTAGCAAAAGCTACAGAGGGGAGGCATGGTTAGGGAAGGGAGGTTATGAGACTGGGGAGCCCAAAGGCACTAATTAATAGGCTGCAGTTAAAGGGCAGAAAAGCAGGGAATGGAAATTTTTCAGAGCTCTGATTAAGTCAGATAAAGAGTCAGTTTCTGCCTGAGCTGGGGGTGTAAGACGCCAGAGACAGAGACCAGCAATTCCCCTGCACCCCCGCGGACAGATGGAACAAGGCTCAGGCAGGCCAGGGCCCAGCCCCGGTCAGAAGAGAGGACAGGACAGCAGTCCAGGACAGCGACCAGTTACAGAGCACCAACCTAGAGGCCCCTCCCCAGCCCTGTTGATGCTTCCAGGCCTTTCGAGCGGCCAGGTTCAGCCTGAGTCCCAGCTTTCAAGTCATCAGCTCCAGGCTCTCTGTCTGAAGCTTCCAGTTCCTCCCTCCTTTAAAGTTCCACAGCACTCTGCACCCACCTCCGTCCTGGCACTGAACACATCTCTTCATAGTTTTGGGAACACCTCTCTCTACCCAAGCAGGAAGACTTTCTTAAGCAAAATTATATTTTTAGTCTCATCTCCAGGC TCONS_00194497 s 3' 2800 TCONS_00194497 s 3' 2197 EMBV3_25653 GCATGGTCACGTGCTCAGGGCGGGAAATCTGACCGCACGTCCTGCTGAAGTCCTTGACCT Gene BVT0101_056096 + 0 NULL GK000002.2:107891800-107892321 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106165 TCONS_00106163 TCONS_00103334 TCONS_00106167 TCONS_00106164 TCONS_00106168 TCONS_00106166 2 XLOC_062736 XLOC_062082 Coding TCONS_00103334 XLOC_062082 NonCoding NonCoding ATG9A 2:107891874-107900030 x TSS76755 598 2 TCONS_00103334_1 47 2 0.926916002452483 0.00041967431450897 4.13484916552112e-05 9.72978755172835e-50 0.00352540509889877 1.40438946273815e-05 0 0.000748319868168269 1.07570665983783e-87 0 0.00033026010419555 0 0 3.36250374664846e-06 0.00295990516595116 0 0 8.32891872837069e-05 0 0 5.72933873095625e-141 0.000516429817118283 0 0 0 2.13934483859539e-166 8.49795905828399e-83 7.89680877599704e-195 2.71903064690121e-05 0 0 XM_005202864.1 ATG9A PREDICTED: Bos taurus ATG9 autophagy related 9 homolog A (S. cerevisiae) (ATG9A), transcript variant X1, mRNA. 2e-13 80.6 100.00 0.0719063545150502 NM_001003917.3 Atg9a Mus musculus autophagy related 9A (Atg9a), mRNA. 1e-10 71.6 95.45 0.0719063545150502 0 noncoding CGCTGCTCGCGGCAGGTGGCCCTCCGGCCGGGTCCGAGCCCACGGGAGTGTTCAACGTCCGACTCCAGCGACTCTCTTCCTCAGCAGCCCCGCCCACCGGGGCCGCCCCTGGCCCCTACTCAGGTCCCCATTGGCCGAAAGTCTCCGAAGGGGCGAGGAGGGGGATGGTGCACGCAAAGGGCAAAATAGACGGGCGGAGCCGGCATGGTCACGTGCTCAGGGCGGGAAATCTGACCGCACGTCCTGCCGAAGTCCTTGACCTCCAAGGAACCATGGTTCGGGAAGCTGCCCTTCTGCTCGCCCGCTAGGTTCAAGGTGCACTCCACTCTTCTTCAAGGGATTAGAGCCAAACCCACACCAAGTTCTTCCCCTCAAAGGGCCTGGCTTAGAGAGGGGCTGAAGGTTCAAGAGCTCCAACACAGAGACACAAAGGATATTCGAGAGAAGAAGAGGTCAAGATTTTCGATGTGGTGCCAAGGTGCTGTGGGTACAGGAGCAGAGATGTCAGAGCCTCGAAGAAACGCAAGCCCCTTGCTCCCTCAGCGTCCCTCCACCAAATCTCCCCCCCAAGTCCCAGTTCTGGCTGTCATGTCCAAGA TCONS_00106168 TCONS_00106169 r 5' 0 TCONS_00106168 TCONS_00106169 r 5' 0 EMBV3_25855 CATGCTTGGTGTGGAGGCAACTTCCTGGAGTTATCTGTTTCATTACATCTGCCAAGACAG Variant GeneID:100337101|LOC100337101:XM_002699703:40_cdna 206^270 1 EMBV3_13714 GeneID:100337101 X GENE LOC100337101 NULL vesicle-associated membrane protein 7-like EMBV3_20216 AGAACGGAGCCCACGAGGAGAGCTGGATGAAGAAGGTTACATGACTCCTATGCGAGACAA Gene GeneID:522419|ERBB4:XM_002685558:1_cdna Constitutive 0 NULL GeneID:522419 2 GENE ERBB4 NULL v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) EMBV3_26056 GGCATAGTAACAATGGCGGACGGCCAGAATCTGTCTTGGCATGTTATTTTCGCATTTCTC Gene GeneID:512637|GPR110:XM_002697271:29_cdna Constitutive 0 NULL GeneID:512637 23 GENE GPR110 NULL G protein-coupled receptor 110 EMBV3_27571 GCAGCTAACATCACCATCAACGTATACCTCGTCAATGAACCTTGGCTCTTCTCACTGGCC Gene GeneID:786996|GDPD4:XM_002693508:210_cdna Constitutive 0 NULL GeneID:786996 15 GENE GDPD4 NULL glycerophosphodiester phosphodiesterase domain containing 4 EMBV3_18021 ACAGTCAGCTGTTCCCCTCTCTACCTTTGACTTCCAAAGCAACTTACCCCCTTTGTGTGC Gene GeneID:531850|TNFAIP8L1:NM_001103270:54_cdna Constitutive 0 NULL GeneID:531850 7 GENE TNFAIP8L1 MGC157211 tumor necrosis factor, alpha-induced protein 8-like 1 EMBV3_27869 CTGTAACATTACTGTACAGAAGATATCAGCTATTTTCAGTCCCCCAAAAGGGTCAAATGC Gene GeneID:536186|CRISPLD1:NM_001101165:52_cdna Constitutive 2 NULL GeneID:536186 14 GENE CRISPLD1 NULL cysteine-rich secretory protein LCCL domain containing 1 EMBV3_15528 GAACAACCGCAGGTCGAATTGTTCGTGAAGGCGGACTGAGACGGTACAGAAGCTGTGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01927 TGTGTTTCTGTTACGGGCAGTATGTCACCTACCACGACCCGCCCCTGCTGTTTGAGATTT Gene GeneID:509206|STS:NM_001075394:8_cdna Constitutive 0 NULL GeneID:509206 X GENE STS ASC steroid sulfatase (microsomal), isozyme S EMBV3_06127 GCATCAAGATTGCGAGAAGAAGCCCATAACATGGGAAGCGTTCATATGTCAGAAATTTGT Gene GeneID:532597|WAC:XM_002692128:87_cdna Constitutive 3 NULL GeneID:532597 13 GENE WAC NULL WW domain containing adaptor with coiled-coil EMBV3_28432 CTTCACCAACTGAGCTATCTTAAAAGAACCTTATAAAACATTTGCAAAATCATGTTCAGT Gene BVV0102_301138 + 1 EMBV3_27839 GK000006.2:87556158-87608785 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00340 TTGACCAGAAAGAGGAAGCCCGTCAGTCCAGACAGCTCGTGGAACTTTACCTCCAAGCTT Gene GeneID:100301359|LOC100301359:XM_002688137:25_cdna Constitutive 0 NULL GeneID:100301359 6 GENE LOC100301359 NULL similar to DNA fragmentation factor, 45kDa, alpha polypeptide EMBV3_30830 TGGATGAGGCCTTTGACTTTGTGAAGCAACGCCGGGGAGTCATTTCCCCCAACTTCAGTT Gene GeneID:539140|DUSP2:XM_002691131:128_cdna Constitutive 0 NULL GeneID:539140 11 GENE DUSP2 NULL dual specificity phosphatase 2 EMBV3_06496 TCACGACTGCCCTTCACTGCATGTCCCCAAACTCAGCATGACCCCTATCCCCTTCAATAA Gene BVV0102_190728 + 0 NULL GK000002.2:70144244-70586540 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39880 CATCTTCAAATCTGGACCTCATTCAGAATGATCCTGCCTCAGGCCTAGGAAAAAGTTTTC Gene GeneID:520192|EPHA4:NM_001083441:115_cdna Constitutive 0 NULL GeneID:520192 2 GENE EPHA4 MGC142975 EPH receptor A4 EMBV3_14343 ATGTGTGATTGCGGTGGTGAGGGTACTCCTGGACGTTGTTACCATCCACTGCCATTGAGG Gene GeneID:100335173|LOC100335173:XM_002698221:809_cdna Constitutive 0 NULL GeneID:100335173 25 GENE LOC100335173 NULL hypothetical protein LOC100335173 EMBV3_31456 AAAAGTCAAGTAGAGGGTACTGGCTAACACAGCTCTGGATGGTTCCTTGGGCTGGGAAGA Gene BVV0101_004506 + 0 NULL GK000008.2:70946953-71085501 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27241 GAGAGGGTCCTCCCAGGAGCGCCTGAACAGAAGCATCAGGTCCATGCTGCTGCTGGCTCG Variant GeneID:100125923|SCO2:NM_001105493:5_cdna 301^480 1 EMBV3_14456 GeneID:100125923 5 GENE SCO2 MGC165812 SCO cytochrome oxidase deficient homolog 2 (yeast) EMBV3_28779 CAGAGAGAGGAGGAGCTTCACGGAAATCGACACGGGGGAAGATGATGACTTCTTAGAGCT Gene GeneID:535990|KCNB2:NM_001024563:49_cdna Constitutive 0 NULL GeneID:535990 14 GENE KCNB2 NULL potassium voltage-gated channel, Shab-related subfamily, member 2 EMBV3_32813 ACCAATGAAGGGTTGTCAGAGAGTTAGTTAACAGCAGACCTTGCAGCTACTTTGTGTGAG Gene GeneID:510457|C20orf111:NM_001015568:976_cdna Constitutive 0 NULL GeneID:510457 13 GENE C20orf111 MGC134505 chromosome 20 open reading frame 111 EMBV3_39927 GTTGCAGCTTCCCAGACAACATCTGTCTAATTTTCTTAGCTTCTCGCTCATGTTCCCGAG Gene BVV0102_250695 - 1 EMBV3_06001 GK000005.2:15013540-15546052 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190968 TCONS_00190967 1 XLOC_116776 NonCoding TCONS_00190967 XLOC_116776 NonCoding NonCoding LOC100847746 5:15078752-15262465 j TSS143190 561 4 TCONS_00190967_1 44 0.0570409982174688 3 0.996962637171225 3.18662118043456e-05 0.000573172735243468 1.64955350543687e-05 1.48013421011071e-05 5.02721996055948e-05 4.26058185438279e-05 2.07904392396421e-05 0 0.000222696219477858 0 0 0 1.02291730159523e-05 0 0 0 0 0 0 0 0 0 0 0 1.23496119768387e-05 0 2.08876808369152e-05 0 0 0 XR_231040.1 LOC100847746 PREDICTED: Bos taurus uncharacterized LOC100847746 (LOC100847746), 0.0 652 100.00 0.641711229946524 0 noncoding GAAGATTCTTAAGCATTGGACCACCAGGGAAGTCCTACAGTGGATTTTTTAAAGACAAGTGATGTGAAGGCGTGATATCCAGAGCTGTGGCAGCCTTCTCGGGAACATGAGTGAGAAGCTAAGAAAATTAGACAGATGTTGTCTGGGAAGCTGCAACCTACCTTCCAGTTCTGTGAAATAGTGAACTATTTCATTGATCAGGAATGGACAGATAAATCACCAGAGAAGATAGACAACTGCGTGAATATTGATGATGATTCCTGGTATTAACACTTAAAAGTTAGTAAATATTGCATGCTGTTCAATTTCATCAAATTACACTTATCTGTTTTATTTTTCTTTTAAATGCTAAAAATAGTTGAAAAATAAATGTTTTCATGGAATCATAATGCTAGAAAGGACCTTAACAGTTTTGCATTTCCCTTTGCATTCAAATGGATTTTATCGAAGACTCTCCAAATTGTTATACACTAATAGATATCATTTGTAAACATATTTATATGTATTTATATAATGTTATAATTCTTTATAGCTAATAAAATATATTACAATTTTTTCCTA EMBV3_32563 TGGGCACAAATATGACCAACTCGAAACTCACTGGACCAACACACAAAAGGACTCCGCTCC Gene GeneID:515356|LOC515356:XM_002695757:219_cdna Constitutive 1 NULL GeneID:515356 19 GENE LOC515356 NULL similar to cytochrome b5 domain containing 2 EMBV3_11646 ACCAAAGACCTTACCCAAACTACCTAAATCTGCTCCAGGCATTAGACTTGCCCCTGTGGC Gene GeneID:534327|NHLRC2:NM_001083723:63_cdna UTR3_Alt 2 NULL GeneID:534327 26 GENE NHLRC2 MGC140213 NHL repeat containing 2 EMBV3_16942 CTGAGCTCCAGTGCTACCTGTAATGGGAAAGAGATGTCACCAACCAGGCAACTCCGAAGA Gene GeneID:777592|LOC777592:XM_002690108:106_cdna Constitutive 0 NULL GeneID:777592 9 GENE LOC777592 MGC133680 hypothetical protein LOC777592 EMBV3_38734 AGGTCTGCCCTTCGGTCATTCTGCTCCAAGCCACCTTATAACACCACCTGAAACTGTCAT Gene BVV0102_050110 + 0 NULL GK000007.2:45844074-45862607 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06636 AACTGCTCCTGCACCGCGGGTGAATCCTGCACGTGTGCCGGCTCCTGCAAATGCAAAGAT Gene GeneID:404070|MT2A:NM_001075140:81_cdna Constitutive 0 NULL GeneID:404070 18 GENE MT2A MT-2 MT2 metallothionein 2A EMBV3_00811 TTTTTGCCTTTTCATACTGGGTTCTCAAAGCAAGAGATGAATGGCCAGAGATGCATGGCC Gene BVV0102_300830 + 1 EMBV3_11333 GK000001.2:139363857-139786932 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32085 CTACCATCTGGAACACACAGAGATTCACAGAATTGGGTAGAGAAGACAGGGGGTAGGGAG Gene BVT0102_249695 + 0 NULL GK000003.2:163365-195879 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37918 AGCCACTTCTAATCACTGTGCCAGTCCCATCTTACGTACCCTTGTTAAAATGGCGTGTAC Gene GeneID:519444|CADPS2:NM_001102055:28_cdna Constitutive 0 NULL GeneID:519444 4 GENE CADPS2 MGC159869 Ca++-dependent secretion activator 2 EMBV3_00967 TCTTATTTTTTAAGAATATTTGATATCAAGACCTGTCAAGTTGCTCTTAATTTTGCCAAT Variant GeneID:281577|WASL:NM_174219:7_cdna 543^629 1 EMBV3_01387 GeneID:281577 4 GENE WASL NULL Wiskott-Aldrich syndrome-like EMBV3_02710 GACCTGACCATGCAGCTTTGGTGTCTTCATCCTTCTCTCCCACCTCCATGAGTGCATACA Gene GeneID:100337478|LOC100337478:XM_002687387:72_cdna Constitutive 0 NULL GeneID:100337478 5 GENE LOC100337478 NULL glutamate receptor interacting protein 1-like EMBV3_42270 CGCCTCCCACTGGAGCGCGATACCGTATTAGGGGCTGTGGTGTATGATCGTTTTAATAAT Gene GeneID:617543|REEP5:NM_001046605:57_cdna Constitutive 2 NULL GeneID:617543 10 GENE REEP5 MGC137184 receptor accessory protein 5 EMBV3_20321 TGTTTGACCATATCTTCATGCTCATATTTGATTTCTGAAGACCTCCTCCATACACTTCAA Gene GeneID:534211|BIRC6:XM_002691220:50_cdna Constitutive 2 NULL GeneID:534211 11 GENE BIRC6 NULL baculoviral IAP repeat-containing 6 EMBV3_04295 ATTGAGACCCCCAAGGCGGCCCCGAAAACCCAAAACACTAAATAACTCTGAAGACTCCAC Gene GeneID:535824|MYO3A:XM_002692073:195_cdna Constitutive 0 NULL GeneID:535824 13 GENE MYO3A NULL myosin IIIA EMBV3_00922 CAGGAAGGCCCCAGTTACATCTAAGGAGGATTAGCTGATGGATGCTGTGCAGGAATGACA Gene BVT0102_350860 - 1 EMBV3_21099 GK000021.2:23387740-23429311 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118867 1 XLOC_072753 NonCoding TCONS_00118867 XLOC_072753 NonCoding NonCoding - 21:23419642-23421599 - TSS89161 1024 4 TCONS_00118867_3 40 0.12109375 2 0.477505112474438 0 0 0 1.62190226650165e-05 2.89287265091324e-05 0 0 0 6.16416157290576e-05 0 0 0 0 0 0 0 0 0 0.00203782546680659 0.000323051843660404 0.000127477195535422 0 0 0 0.000162386211973291 0 6.86618594341665e-05 0 0 0 NR_046096.1 LOC283692 Homo sapiens uncharacterized LOC283692 (LOC283692), non-coding RNA. 7e-35 152 80.92 0.166015625 0 noncoding 0 0 0 0 -0.140540579189404 0.398766973671834 0.001436517434551 0.980840802248255 GTGGAGGAGGGACCCGGCGGTGGGGTCAGACTGTGGTCAGGGAGGGCGTCTTTGGGGTAGGAGCGGACCCCGGGCTGAAACCCCGGGCAGGGAGTGCCACACCCGGATACCTACAGCACAGGAGCCAACTGAGGGTGTATGGCAGCACCAGGAAGGCCCCAGTTACATCTAAGGAGGATTAGCTGATGGATGCTGTGCAGGAATGACATCTCAGCCCGGCCGAATCTTTCAAGACAAGCTGGAGAAGCAGTTTTTGTGTTTTTGGGGGGTTTTTTTAATGTGCAATCTTCCTAATTTTAAATTTGGTCATTAATTCAAAGAATCAAGCCCAGCCTATCCAGGGGCCTCATGCAGCTCATGCTTTTTCTTCCCTGACCCAAAGCTGAGCAAGAGAAGAACCGGAAACTGGAATAGTGCCCAAGGCAACAGTACCTGGGAGCTCTTTCATATTTTAAAACTCCCAGCTGTAAGAAAAGGAAGGCATCTTTCAGGTGTCTTGGAACAGAAATTTGTGCTGCATAAAATCCCTCTTCTTAAAACTTTATGTTGCAGTAATAATGAGAATACAGTTGACCTTGTACTTGACTGAGTACTTGGCCTGTGCTTGGCACAGTTCCAAGTGTTTCACCTGCATTAACCCATTTGCAGACAAGGAAACTCAAGCTCAGAGAAGTAACTAGCTTAAGGACTCCCAGTTTAAGTAGAAAAGTGAGGACTCAAACCCAGGCAGTCTTCTGGCTTCAGAGCCTAAAGCTTTAACCAGATAAGAACAAAATGTCCAGCACCCTTACATGTGTACTACCTTCTGACTGACCCCAGAGCGCAATGTAGGCAATGAAGGAAGGGGTGGGTGCATGCACATACACTCATGCGTTTGGTGAGTCCTGGCTGCCTGCTCTGACTTGGCCAGGCTTGCAGGTTATACAGGAAGAACAGTACCCCTGACTAGATGCCTGTAGTACACAGGGCCGGGTGCGGAAAGAGGCAGAGGTGGAGGTATTACATGACTTGGTCAAGTCCCCGC TCONS_00120773 TCONS_00120774 r 3' 7712 TCONS_00120773 TCONS_00120774 r 3' 9668 EMBV3_23678 AGTCAGCAGTGAGGTACGCCAGGACTTCTTTCCCACACAGCTAATGCCAATCTCTGGCTA Gene GeneID:526766|C9:NM_001035364:33_cdna Constitutive 1 NULL GeneID:526766 20 GENE C9 MGC127814 complement component 9 EMBV3_31388 GCTCCTGCGGCCGCTGTTTCAACCCAGGCGGCAGAAAAATTAATGAAACAAATTGGTGTG Variant GeneID:506045|ATAD1:XM_002698369:155_cdna 62^236 4 EMBV3_14576 GeneID:506045 26 GENE ATAD1 NULL ATPase family, AAA domain containing 1 EMBV3_31999 CAACAATCCGTGGCTGCTCATTCTTGCCTACTTTTACTCTCCCTCTGAAGCAGGTTAGCG Gene GeneID:282125|YWHAE:NM_174491:31_cdna Constitutive 2 NULL GeneID:282125 19 GENE YWHAE NULL tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide EMBV3_37944 CAGTAATTCAGAACAGAGAAGTTCCCAAAGCATTTGCAGCTGGCATCTTAAGGACAGCCG Gene GeneID:616033|NARS:NM_001046572:194_cdna UTR3_Alt 2 NULL GeneID:616033 24 GENE NARS MGC127700 asparaginyl-tRNA synthetase EMBV3_01591 GGGACGGGAGCTGGAAAAGGTGCCCCATGATTTTTTGCTTGTTCGTCCCCCTGTGCCTCT Gene GeneID:539870|AQP2:NM_001101199:101_cdna Constitutive 0 NULL GeneID:539870 5 GENE AQP2 NULL aquaporin 2 (collecting duct) EMBV3_35884 GCCAGCGCCATTGTCAACTTCGTGTCAAAGGTCATGATCGGCTCCCCTAAGAAGATCTGA Gene GeneID:516555|TNS3:XM_002686886:87_cdna Constitutive 0 NULL GeneID:516555 4 GENE TNS3 NULL tensin 3 EMBV3_05568 GTACTTGGCAGATAATTTCCAAAAGTACAATGCATTCACGGTATTGAGAGGCTGGGCAAC Gene GeneID:533672|WIF1:NM_001075996:1070_cdna Constitutive 0 NULL GeneID:533672 5 GENE WIF1 MGC139213 WNT inhibitory factor 1 EMBV3_38707 ACCTGCCGCGTAGATGCGCTTGTGTCTTGAAATGATTCTGGGCCTAGTTACTGCCATCTA Gene GeneID:534933|SCRN1:NM_001110803:22_cdna Constitutive 2 NULL GeneID:534933 4 GENE SCRN1 NULL secernin 1 EMBV3_09571 TGCTGAAGTATGAGTACCAGCCCTTCGCTGGGAAGGGAGAAGTTCGGAGCTGTCTTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03535 AGAGTCTGTCTAGATGCTCCCAGAATTGCTGTTAGTGTAGCTGGTTTGGAGTATCAGCAG Gene GeneID:505430|ATPAF1:XM_002686414:364_cdna Constitutive 0 NULL GeneID:505430 3 GENE ATPAF1 NULL ATP synthase mitochondrial F1 complex assembly factor 1 EMBV3_33836 AGACCCCAAGCACAGCTCCCCTAAAGTTCAGGGCGGGTCAGCTGATAACCTGAAGCATCA Gene GeneID:787634|LOC787634:XM_002695038:345_cdna Constitutive 0 NULL GeneID:787634 18 GENE LOC787634 NULL similar to HAI-2 related small protein EMBV3_14493 GGGCCGCCCCCAGCGGCGGGGCTGCCTGGACATTTAAGTGAGTGGTACTGCAGGAAGTCT Variant GeneID:515194|MRPL39:NM_001080730:19_cdna 80^285 3 EMBV3_43427 GeneID:515194 1 GENE MRPL39 NULL mitochondrial ribosomal protein L39 EMBV3_24652 CTTGTTTCGGGAGATCAATTGGGAAGAGCTGGAAAGGAAGGAGATCGACCCGCCATTCAG Gene GeneID:505901|PRKCQ:XM_002692066:1_cdna UTR3_Alt 2 NULL GeneID:505901 13 GENE PRKCQ NULL protein kinase C, theta EMBV3_28489 GAAGCCATGTTTCGAAGACCTGTAGTACAGCTCTGAATCGCGTGCAGTTGCTCGGTCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30681 GAGTGTGACATCGCCAGGCATTATGGAGAGTGTTTTTGTTGGCCATTGTTACCTGGGTCC Gene GeneID:618331|LOC618331:XM_002689278:11_cdna Constitutive 0 NULL GeneID:618331 7 GENE LOC618331 NULL similar to PLAC8-like protein 1 EMBV3_31737 CACTCCAGGCTCACAAAAGGACTCATACAGGCTGCCTAAGCAGATTCACCCATGCAAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26280 GTTATGGCAATAGGAGGATGAACCATAGCATGACAACCCTTCCCCTGAGAAGCGGGAAAG Gene BVV0102_025397 + 0 NULL GK000013.2:63790157-63817039 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30584 GATGCACAGCAAGCCAAAAACGCCCAGACGCCAAGGTTTGCAGCAGAGGGGGTTTATTCA Gene GeneID:785422|LOC785422:XM_002686196:426_cdna Constitutive 0 NULL GeneID:785422 3 GENE LOC785422 NULL similar to Intersectin-2 (SH3 domain-containing protein 1B) (EH and SH3 domains protein 2) (EH domain and SH3 domain regulator of endocytosis 2) EMBV3_02731 CCTTGAGCAAATCCCGTTTCTCCCTGAGCTTCAGTTACCCCGTCTGTAAAAGGGAGGTGA Gene GeneID:618055|B3GNT2:NM_001034808:128_cdna Constitutive 0 NULL GeneID:618055 29 GENE B3GNT2 B3GNT1 MGC128466 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 EMBV3_17685 CACTGGTGTACAATGTGCTGAAAACCCTCATGGAGATGAACGGCAAGCTTTTCGATGACC Gene GeneID:533788|PPP2R5A:NM_001081728:87_cdna UTR3_Alt 3 NULL GeneID:533788 16 GENE PPP2R5A MGC138101 protein phosphatase 2, regulatory subunit B', alpha isoform EMBV3_41668 CCCTTTGCACACTGAGGAGAGACCCCAGGAGGAACAGCGAGGTCCATTCTTTTTAGAGAA Gene BVV0101_006156 + 0 NULL GK000013.2:45243035-45473918 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09916 TGTGCTCGACTGGTGTCTAATAAAGCTGTGTCACGTCAGGCCACAAGGAAGAAGTCATCG Gene BVT0102_048789 + 0 NULL GK000001.2:146461728-146490838 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15801 AGCTAGTGGAACAGAAAGAGTTACACCTTGTGGGTGTCAATTTGGAACCTGTTGGCCAGC Gene BVT0102_276539 + 0 NULL GK000003.2:34392861-34401023 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173008 1 XLOC_104271 Coding TCONS_00173008 XLOC_104271 Coding Coding TMEM167B 3:34400125-34405974 = TSS128722 2794 3 TCONS_00173008_2 74 3 0.522742818057456 0.000882371689772078 0.00124075331074435 0.000593925806191751 0.000407175980408581 0.000453947883999356 4.97667416668467e-05 0.000220689968750966 0.000237193156111685 0.000267961032205132 2.06164514669798e-05 0.000154032540699346 3.5931839541703e-05 5.7109997614222e-06 6.06255291520988e-11 0.000165003991897672 0.00246219994259764 0.000781434305775491 0.000455327085111224 0.00035080809343601 0.00103128991981894 0.000182413610178955 0.000279257597596416 0.00121271091321477 0.00110674560342584 0.00049275505462931 0.000336338969339272 0.000501953869163289 0.000115686977477528 0.000155869900117565 0.000770824509649659 NM_001128503.1 TMEM167B Bos taurus transmembrane protein 167B (TMEM167B), mRNA. 0.0 3299 99.95 0.655332856120258 NM_020141.3 TMEM167B Homo sapiens transmembrane protein 167B (TMEM167B), mRNA. 0.0 2504 80.47 0.975662133142448 TCONS_00173008_2 sp|Q0IIL4|KISHB_BOVIN KISHB_BOVIN Protein kish-B; 3e-47 148 100.00 0.986486486486487 1 noncoding 0 0 0 0 -0.0171615189998621 0.878029340930982 0.0274386533221954 0.625282436471143 TCGCCTCCCTTCCCTTGCGCCTGCGTAGTACGGCTCCTGCCCGTTGCCGCGGCCCGGATCGGGAAGTGTCAGGTGGGAGCTGGGTTCCCCCGGTCTTCGCCGCTACCGCCACTGACCCCTCCCCCGGACTCCCTATCCAGGACCGGGCCCAGCCGCCATGACGAACGTGTACTCCTTGGATGGGATTCTGGTGTTTGGTTTGCTGTTTGTTTGCACCTGTGCCTACTTCAAGAAAGTACCTCGTCTCAAAACCTGGCTGCTCTCAGAAAAGAAGGGAGTTTGGGGTGTGTTTTACAAAGCTGCTGTAATTGGAACCAGGCTGCATGCTGCTGTGGCAATCGCCTGCATTGTGATGGCCTTCTACGTCCTGTTTATAAAATGAATTCTGAAGCATCCATTTCATCAACCGCCAGCCAAGGGGACAAAGGTGAAGAACCTGTCAGGAGCCTGGGCGCAGCATAGGAAAGCTCAGCTAAAATCATCGAAGTCCCCAGGATGACACCACAGCATCTTCCCCTGCTTCCTGTGGGGAAAACTCCTCATGATTACAAACATTATTTATGCTTCAGGGGACTACAGAAAGCAAACTTCCTTTGACCTGCTTGTAAATCAGTCCTCAGCAGAGAGCATATAATGTCCAGATAAATTACTCCCCTCGGTGATACGATTCCATACCTCCTGCTTAAAAACTGATACCTATTTTGTTCTTCAGCCCCTCATCAGGCTTTTTTCAAACTGAGGCTCATTAGGGGAGGATATAGGCTGTGTTCAAACTTCTTGGAAAGAGAGATAATTTTTAAGACTTGACTTTTATTTTTACTGTTTTATTTGGATGTGATAAATTGCAGGAGTGCTGGGAGGGTGGGGTTGGGAGGCTGAGTGGGAAATAGTAGTTAAACAATGCCAAGACATTGTTTTGGCTTTGGAAATTTATCTTTCACATACCCACCTGGGAACATAGAGAGGCAAGATCCTCACTGCAAAAAGAAACAGTGAAAATAGCTCTGCTGTGTGCTGGAGCTCAGGAGTTTTGCCAAAACAATCTGGGCCTACATAAGATTTGGAAATTATCTGTCTATGGTGAGACCTGAAAGGAGTGATTTAGACAAGAAACAATGTTCCATTCAGCAATATTCCCAAAAGGAAACTTCACCCCTTCAAATGGTATATGGAAACTGTTGCTATTTTCCTAAAATTTTTAAAATTTTTTCTAAATGACTGAGTGCTAAATACTGTTACTCAGTTTTAAATGCCACCACTAAGGGAAAGAGAAACTATTGAAGAAATAATTATTTAATATATTTGCAGTTGGGGTAGAAGAAATAAATACATTTAGTGTATTAATTCATATGCTAGTAAAGTCATCTAGAATTTATTGGGATGTTAGATGGAAGTTTTGTCATGTTACTGAAGATACAAACTTATTTTTTGTTTAAATCTGGGTTATTATGGCAATTTTCAGTCAATTGTGTTTTTTGGTTCATTTTAAATTTTGTTCATGTTGCAGTACTCTTTAGCTGTCTCTTGGAAATTATAAGAACATTAGAAATGTTAATGAGAAATTGATGGCACTCATATGCATGTTTGTACAGTTCATACAATCCATGAATAAATGAGAGTGTCTTCTAAAGTAAAGGAAAACCCAGGTTTCCAATTGAGATTGATGGATGAGCTTTTCCATGGAGTAAACTCCTGAGCAAATAGTTTTAGATGACTCTTATATTTGAAGGGAAGACTTCTCCATTCCCTCCTTCTTATATCTACAAAAGGATTAACTGTCGCATTTATGAAGCCTAGAATTTCTCTTAAAAAAAATTGGTCAAATTATTGTAAAGAGCAAGCATAGACATAGGTCTACCAGTTGAACTGCTCATTAAAGTAAAACTTGACTATGGACAAGTTGGCTGTGGTTGATCCCTTTGTGGTAGTAAATTGTCTTTTGTCTTATTCCAAAAGAACAAAAGCTGCTAGGAAGTTTAGATTCTGAAACACTCAGTTTAGTGCTTTGAGGGTTCCTAGAAGTATAGAAAGTCATCAAGTAAACACTACATGTCTAATCATCATCTCTGGCTGTTATCTCCAGAATTGGTCTACAGGGTAAATTTCAATGATTCCTATATTTTCATTGTCATTTCTGAGACTTTTTCACACAAGAGAAAGGAAAGCTAGTGGAACAGAAAGAGTTACACCTTGTGGGTGTCAATTTGGAACCTGTTGGCCAGCAGGAATGTCACTCCCTGGAAATACAGGTTCAGCATGTTTTGCACTTGTTATTTTGTAGCTTTAATGACTTTTGTTTCCTAATAGGGCTAATAACTTAGAGCTTCTTCATATTTTAAACTAGTTCCATTTCACAGTTCAAATCAATTTTTACAGCTTCCTGCGTGGGTCATCTTGACCTGAACTCTTGAATTGTTATATTTTGAGATGTTTTCATACCAGAACATACCAAAAAGTGCATGGAGTAAAGGTAATTTACAGCAAGAAACAAATACACAGCTTGTTTCATTTCTTTATATAAGCAGATAAGCAGAAACTTGTTTTATTCATTACTTTGATTGATGTATCATAAATTTTTGACTGAAAATTGTAGGAAGTTGTTCCTCTAAGAGAGTCTTTTAGGGGTGGAAGCATGGGGATAGCAGTATTGCCTCAGATTCAAACTGGCATCACCATAAATGTTGTATGCCAGGGTGGAATGAAGTCAGCTTTTTATAGTTGAAATAAAATTTTTTATTCATCATTGTCTGCACAGTCCTTGAAAATAAAATTTTTCCCTACCGTTTTTGTCCAT EMBV3_31155 GGAAGCATCAGAGACTACCATTAGTTACGAAACAGACCGCGCTGACCATCAGAAGCCTGT Gene GeneID:614807|C3H1orf54:NM_001076346:163_cdna Constitutive 1 NULL GeneID:614807 3 GENE C3H1orf54 C1orf54 MGC142459 chromosome 1 open reading frame 54 ortholog EMBV3_18515 AGAAACTGCAGTATTTTCAGCATCTTGGTGAAACTGTACGCCACCTTCTGGTCTGTAAGG Gene GeneID:617047|C27H8orf4:NM_001035490:112_cdna Constitutive 0 NULL GeneID:617047 27 GENE C27H8orf4 C8ORF4 MGC128767 chromosome 8 open reading frame 4 ortholog EMBV3_25521 AAAGTCACTACCCTGATGAATCTGGAGAACAAAAGAGCAACCCTGCTTCAGTGCTGGGGC Gene GeneID:512237|PER2:XM_002686586:58_cdna Constitutive 0 NULL GeneID:512237 3 GENE PER2 NULL period homolog 2 (Drosophila) EMBV3_03024 ATTGCACCTTTGGACATCGGTGGCGCTGACCAAGAAATCAGATTGAACATTGGCCCAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24591 CACCAGAAGCTAAGCATTTTCATCCCTCAGAACCCACTGTCACCAGTTTACAAAGTTAGC Gene GeneID:539676|DMTF1:XM_002686719:74_cdna UTR3_Alt 2 NULL GeneID:539676 4 GENE DMTF1 NULL cyclin D binding myb-like transcription factor 1 EMBV3_11604 CTTCTAAGGAAACTTCTGTCATCCTTTCCAGAGCTTGAACTTCTGTTTATCACATCACAG Gene GeneID:511114|OSTN:NM_001098935:75_cdna Constitutive 1 NULL GeneID:511114 1 GENE OSTN MGC160057 osteocrin EMBV3_32016 TGTACATGAAACCCAAGAGCAAGGAGGCCCATATCTCTGATGAGGTCTTCACGGTCCTCT Gene GeneID:618828|LOC618828:XM_002689684:111_cdna Constitutive 0 NULL GeneID:618828 8 GENE LOC618828 NULL similar to olfactory receptor Olr834 EMBV3_21326 GGAGAGAAACCTTACAAATGTAATAGGTGTGGGAGAGCCTTCAGCCAGAGTTCATCTCTC Gene GeneID:782049|ZNF514:NM_001110091:107_cdna Constitutive 0 NULL GeneID:782049 11 GENE ZNF514 MGC139593 zinc finger protein 514 EMBV3_31690 CTGAAGATTCATGAGCCCGTTGGGAGAACTTTGGGAAGAATGTGTGGGGCTCCTCTGTGT Gene GeneID:506466|LARGE:XM_002687674:57_cdna UTR3_Alt 2 NULL GeneID:506466 5 GENE LARGE NULL like-glycosyltransferase EMBV3_08771 AGGCCGTGGGTCTTGCAGCACATTTGTAAGGTAGAGTTGGCTTTATGGGACACAGCTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16567 TTTGTTATAAAGAAAGTAAATTATGAGCTGAATATTATAGTCAGTTCTTGGTACTTAAAG Gene GeneID:535935|LATS1:XM_002690320:17_cdna Constitutive 2 NULL GeneID:535935 9 GENE LATS1 NULL LATS, large tumor suppressor, homolog 1 (Drosophila) EMBV3_40615 GAAGCCCAGGGGAGAGAAAGCACGAGTCAGAGCAAGGAGCACAGATCTTCCCATAAAGAA Gene GeneID:784844|TCEB3:NM_001102333:311_cdna Constitutive 0 NULL GeneID:784844 2 GENE TCEB3 MGC157191 transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A) EMBV3_16960 GGGATGCAGCAATGGGCGCTGTCGCCGTGGAACCTGTGTGCAGACACATTAGAAAAGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03156 ACGTGGGACGGGAACGTACAAATACGAACGCAGCTACAACCTCCTTGAGAGACCCATCTA Gene GeneID:520525|SEZ6L:XM_002694617:164_cdna Constitutive 0 NULL GeneID:520525 17 GENE SEZ6L NULL seizure related 6 homolog (mouse)-like EMBV3_18429 CCATAATTGTGTCCTACAGCTACATCCTCCACTCAATCCTGAAGATGCGCTCCACTGAGG Gene GeneID:523139|LOC523139:XM_002693120:538_cdna Constitutive 0 NULL GeneID:523139 15 GENE LOC523139 NULL similar to olfactory receptor MOR204-2 EMBV3_43603 TCCCAGAATCAGGACATTTTGACCTACAGCTTTTCCTGAAGGGAAGTGATGCTTTCTTCC Gene BVV0102_411985 + 1 EMBV3_37121 GK000020.2:55353708-55661183 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03292 GAAACTCGGAAGCTTTGCCACTTCAGCTCCTCTAAGTTTTCTGCAGCTCTCTGGGAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36153 AAACCACTCCCACCCCGAAGACCTCGCCAGGTGAATCTGGGAAATCCGGGGACCGCAGCG Variant GeneID:281296|MAPT:NM_174106:179_cdna 544^597 4 EMBV3_26683 GeneID:281296 19 GENE MAPT MGC134287 tau microtubule-associated protein tau EMBV3_43453 AACCTTCACCGATGACAACAGAGGAAGAAGGGAACTGGGATTTGGGTAAGTTCTCCTCCG Gene GeneID:538209|PTGFRN:XM_002686122:157_cdna UTR3_Alt 2 NULL GeneID:538209 3 GENE PTGFRN NULL prostaglandin F2 receptor negative regulator EMBV3_01360 TGGCCCACTTTGAGAACCTGCAGAAATACAAGAAGGCCAAGAAACCCAGCCCCACCACCA Gene GeneID:531522|CIZ1:XM_002691671:436_cdna Constitutive 1 NULL GeneID:531522 11 GENE CIZ1 NULL CDKN1A interacting zinc finger protein 1 EMBV3_12826 CCCACTTGGACAGTTTCCTCACCCCGCTCAGCTTCATCTATTGGTACTAACCGTCCTGAA Gene BVV0101_026284 + 0 NULL GK000014.2:15397090-15464447 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052770 TCONS_00052761 TCONS_00052762 TCONS_00052769 TCONS_00052767 TCONS_00052768 1 XLOC_031575 Coding TCONS_00052768 XLOC_031575 NonCoding Coding - 14:15443166-15447750 - TSS39090 3154 1 TCONS_00052768_7 144 0.258719086873811 3 0.312459087933668 2.77823812261213e-09 0.000512558782462114 0.0007298670421558 2.63581341252251e-12 1.22405628027275e-05 7.59869309524698e-05 1.96572288881047e-09 1.84080414399751e-14 2.80819762814769e-05 4.43246195849076e-05 1.26964460025907e-05 1.32284842655586e-09 7.07819217121715e-18 2.96562389886174e-20 1.39444789527539e-09 0.00180494947158793 0.00144117600130007 2.77141429376412e-08 1.08464333337843e-05 0.000153757053943409 4.43077841418934e-05 0.000204888838919989 0.000420025952805204 8.12159873673815e-05 0.000195825505284856 0.000685602208433231 0.000208604642230348 0.000180857707507049 0.000173913795744074 0.000165338693254543 XR_227693.1 LOC101910144 PREDICTED: Bos taurus uncharacterized LOC101910144 (LOC101910144), 0.0 1007 80.07 0.35288522511097 0 noncoding 0 0 1 1 -0.767262250716189 0.00832741558927232 -0.0254914479085213 0.746353068116643 ACAGAGGAACCTGGCAGACTATAGTCCATGGGGCTGCAAAGAGTCGGACACAACTTGGCGTCTAAACAACAACAACAACAGGTGATGCTGGCCATCTTGTTGTCTTTGAGACAGACGCACTCAGGCTAAAGACATTTCCTTGGATGTTTGATGTTTAATCAGTTGTGGGCCCTTATGGAGGGTTTCCCCACCCACTTCCTCATCCGGGTCTTTTGGCTTGGGCCTATTGATGCTACTTGGGCCCACTTGGACAGTTTCCTCACCCCGCTCAGCTTCATCTATTGGTACTAACCGTCCTGAACAGGGTGGCTCAGTGGTAAAGAATCTGCTTGCGAATACAGAAGACTTGGGTTTGATTCCTGGATGGGGAAGAGCTGCTGGAGAAGGAAATGGCTACCCTCTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGAGACTGGCGGGCTACAGTCCATGGGGTCACAAAGAGTTGGACACGACTGAGCGACTAAACAACAACAGCATATAATATTTACTATTTGGTGTTCTGTCTTTTAAAAAATAATTCTAATCAATCTATATGTAATTATTATTATCCCACTTTCCAGATATTGAAACTGAGCCTCCAGAACCAAGAAAACACAGCTTTCATGTAATGAAGCCAGGATTCAAATCCACTAATGTAGACATCCAACCCCGCTTTGTCCAAGCTAATTCTAGAGACACCATCCCAGGTCCTCTGGGATGTGTTCCTTTGGGAATTTCCCTGAGCCTAGGCCTGGGCCCCATGTTCCCCCCTGCCCTTTTTTTTTTCTTTTTTTTTGTTTGTTTTTTTTTTTGTGGGGGGACAGAAATCAGTCTTTTTTAAAACAAATATTTATTTTTTACATTGAAAGATAATTGCTTTACAGAATTTTGTTGGTTTCTTCACATTTGTTAATCTGCAGGAGGAATGGACTAAGACCCCACAGGATGGGTCCGGTGGGTGTGAGAAGTGCAGAAGAAGGTGGACAGCAGGGAGACTGGGCTTTAAAACTTGAGCAGTGTCAAGTGCGAATCCCCAGGAAATTGTGTTGTTGCCACAGGACTTGGACATTAGAAAAATTAACAGAGAGCCAGTTAACATCTCAAGGCCTTCCAGGGGCAGTTCAACCCAGGGACCAGAAATCAGGACTGAGGAGTGCCCAGGCTACTGTGATAGAGGCCAAGTTGATCCCCAAAGATGTGTATAGCCACAGCTGTGTGCAGAGTAAAGGAGACATATATGCATGTATATATGTGTGCATGAGCACACACACACAGACACAGCCATCAGGAGAGCAACTGCGTGCAGTCAGAGACACACAGACAGGACAGGGTTCCTTTATATTGCAGAAAATACCACTCAGATTATCAGGCTTCCCCTGAGTCAAACTTTGCAGATTATCAAGATTTCTTGTTAGTCTTATTAGTCATGCTTTCCATATTCCTGGTCCAAGCTGTGTATAGTATACTACCTCTTGTAGAAAACAAAGGATGAGATACATAGACACACACACACACACAATGTTTTTTCCCATGATTTTTCCACATTTAGACTATGTAAATTTACCTAAAAAGCTTATGAGCATGGTTGGCTCTGAGTAGGAACCTAAGGGCTAGAGGTGAAAAGAGAATCACTTTGCATTACCTTCTTTTTTTAATATTTAAACCTTTCAATTATGGATGTGGGTTCTTTATTCAAAACAATAAAAAAACCAAACAAACAGAAAAACAGACTATGTTCCCATGTCTATATTACACTCCGATGTTTCTGAATTGAGTCCTGTGAGTGAATGGTTGTTTCTGAATGTGATTAACTCTGGGAGCATTTATGATAGGTTGGAGGCTGTTTATGTTTCAATGTAGAGAAGCAGATTGATGGAAGACCCTTGGAGGTGAGGAGGATGGAAATTCTCTAAGGGAGGTAAATTTCTCTAGCCTCAGCCAGGAAAGGCCAGATTAACCACTAGGGAGTGATGAGTGTCAGTAAATTCCACTAAATCAGGTAAGAAATAAGCTAGACTCTTCATCTTGACACCTGGCTGAATTGGAATATCTAGGAGTATTGGGAGATTTGAACTGAATTTAGGGAATTTTTTTTTTTAAAGGTAAGATGACTGTGTACACCAGATATTTGTTTCCATGGCCACATAACTGAGATGCAGACTTTAAAAGGACTAGCTGACTTTGTTCAGTACCTGCATGTAGTAGAACAGTGAGTAGTCATTTTGCTGGTCTCATCACATTTAACCTTTAAAGACTCATACCAAGTAATATCCCATTTTACCTGTACAGAAATTAGGACCCCAAAGAGTTAGGAGTTGATCAACTGGCCCAAGATGTCACAGATAATATGGCAGGGTCACAGTATGACATTAAGGACTCTGACTCCAAACCCTTGGCTCTTCCCAACACTGACTGGAAGAAAAGGAGCCAGGGCTTAATTATCCACAAGAAACTGGCAAATAATTATCCCAAGGTAGTGGCTGTCAGACCCTAGCTACATCAGAATCTCCTACAAAGCTTGTTAAAATACCCCACCCCCATGGTTTGGATTCAGTAGGTTTGGGCTATGGCCTGGGAATTTGCATTTCTAACAAGTTCTCAGAAGATGCTGGTGGTCTGGTCTGTGGGCTCCACTTTGAGAACTAATAAAGTAAAGAGATTAGAATAGGGGCTCTTAAATCTTATTTGGTGTTTTTAGGGTCCACTATGGGAACAAGGCAATTACATGCTATTTATTTCTAGTATGTTTGTTTTATTTTTTTATATTTTGATAAAATACTTTATGGAAATATCCACTATCTCATTTATTTTCAGGGAGAAAACAGAAATGACTTTGTGTTTACAGGCAAATCAGAGGGTAAGGGGGATCAGGCACCTTAAGGTGTACAGTTCAGAAGTAGCCAGAGGACTCCCCAGAGAAAAGGCCCAGTCACTAGTCAGGACTCTTCTGGTCACAAATGACAAAAATCTAACTTAAATCATTTAATATTTTATTTGGCTGTGTGCAATAGAAGCTCACTTTACACAGGTGTCTTGGAACCAAGTTTCTGATTTTGTTGTACAATAACCCTTCTGGAGTTAGATGGGCACTGGCATTGCTTTAGAAGCTCAATAGTATAAGGCCTGACATCTCTTTTTTTAGT TCONS_00051380 TCONS_00051381 r 5' 18433 TCONS_00051380 TCONS_00051381 r 5' 16698 EMBV3_09074 GTTCCTTTTCCAGGCGAACAAGAGTGAATTGGAGGAGGGACACAGGAGCCCTGGTTCTTA Gene BVT0102_125275 + 1 EMBV3_14701 GK000013.2:37332000-37422253 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18496 CGAGCCCTAACTTAAATGCTACCCTATGACACATCCCTCCATCTCTGTCCCCCGCGATTT Gene BVT0102_149953 + 1 EMBV3_04857 GK000019.2:43270820-43279034 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19495 TGCAGCATGAAAACTAAGTAGTTCTTTCCGTTCCCATTCAGAGCCAACTGCTGGCAGAAC Gene BVT0102_232316 + 0 NULL GK000009.2:82332678-82354180 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242155 1 XLOC_148819 NonCoding TCONS_00242155 XLOC_148819 NonCoding NonCoding - 9:82341691-82343058 - TSS181833 1367 1 TCONS_00242155_1 62 1 0 0.000298589052489472 0.000139663649286814 0.000135391336137767 0.000151868743661104 2.16701985610819e-05 0 1.27981512169878e-05 3.02874853554384e-05 0.000311680716277897 7.52467668684124e-06 6.69842621956372e-06 0.000232798794386701 8.39584446599252e-06 1.37644633903725e-05 0.000132793721201389 0.00141042225406584 0.000145740461239677 0.000367094414505639 0.000283269945692551 0.000199908084316051 1.9986509048799e-05 0.000355562940188056 0.000348975535003946 0.000882993468520387 0.000334514092460285 0.000237082472735376 0.000137156443724596 7.7291122100712e-05 0.000223730813996893 0 NM_001100166.1 PHACTR2 Homo sapiens phosphatase and actin regulator 2 (PHACTR2), 0.0 1031 77.86 0.981711777615216 0 noncoding 0 0 0 0 GAAAAAAGGATAGAAGCATAAATGTATTTTTGAAGAGACTTTGGGCAATTGAGAACTTATTAAGGAATGTGGGAGTTTAATCACTCAATGTGGATTTCTTAGACCTGATCCTAGAAGAATATTCTTGTTTCACCATTATATTGGTACAGCGTAGTACCATTATTTTCTTGTCATTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATGTATCTTTTTCTTAAATGCAAGAGGCTTTTACTGACTCTTAATAAGCATGCTTACCCAAATTTTGTTGCATGCTTCAAATAGCATAGCTATACACACTTTACATTCTTTTAAATACTCCTTACCTAACGTACCAATCTTCCACAAGGATAACAGGACTTGGAACAAAGATGTAATGCGACCCTATAAATCTGTAGCAAGCTTTAGAAAAGAATCTTTTGGTCTTTCCCTAGCTTAATTATCTCCAAAGTTGAAACAGTCCTACTTGATTTAAGGAAGATACTATCTACAATCATGGCACCTTTTTTAAAAAGTCTGAATCCAAAGTTAAACTTAATCAAAATACAGGTGTTCTGCCAGCAGTTGGCTCTGAATGGGAACGGAAAGAACTACTTAGTTTTCATGCTGCATTAAGTTGGATTGCTGCTATTAAAAAAAAAATAAAGCACATGGATTAAAAAAAATACTCACCCAAAGACTTAAAAGAACAGAAAATTTTCTGCTAAGTTGTTAAGTAAGGAGAACCTCATTTGGTATTTTAAGAGTGCAAATTGCATCCATAAATACAGAACTGACTTTCAGTACAAAAGGATCAGTGAATTAAAGTTACGAAAGATTTCCCCATGAGCCTACAGTCAATATTGTTTACATTAAGAAGCCATTGTTGTCATCTTGCTATTTTCCATAAAGTCATGGGCATAGCGTGGCTTCCGCTCCCGAGTGCCTATGACCACGGGTAAATACTACCTTGCATCTAATTGTTCTTTCACAATTATTTTGTGCCCCTTTTATTAAAAACACATGTGATGTAGAACGACACGACAAGACCTAAAGAGACTATTTTATTCTCGGAGTTTGGACTGGGATTTTCTGAAGTGATTCTGGTTCATTGTATGGAAAACTGTAATTTTCTATTCAATCAAAAGCAAGCATTTAATCTAATGGGTAAATGTGGGTCCTGCCATTCACTTATATTTTAAAGAACCACTTAAAATTGGATTTGTAAGAAATAAAAAATGTCATCCCACATGGCCTATTACAAAAAGCCAGGACCATTTTTAACTCAGAAAAGTAGCTGGCATCGTTGCCTCTCTTGCTGTACACAGCTGCGTGCATTAATACAATAAACCTAGAATTTTGCACTATTGT TCONS_00236077 TCONS_00236079 . 3' 117 TCONS_00236077 TCONS_00236079 . 3' 1483 EMBV3_28673 GAAAAGTCCTTCTACCTGCCAGTGGGTCCTAGACAAGAATCACCTGAGAGCACTTACGGA Gene BVV0102_076089 - 0 NULL GK000001.2:81898388-81992397 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008910 1 XLOC_004467 NonCoding TCONS_00008910 XLOC_004467 NonCoding NonCoding - 1:81989617-81989991 - TSS5987 374 0.24331550802139 1 0 0 0 0 0 0 0 0 0 0 0 0 2.54950636666872e-05 0 0 0 0.000918047518139539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.106525033876984 0.438928543987476 -0.0364076711461249 0.486122206561602 GACCAGTTATTTTTCAGGAAAAAAAAATGAAAGTGATCTCATGAAACAGGGTAAAAGAGTTCATCAGAAGCCACCTCTATAGATACTTGCTATTATCCTTTGTGTAGCCTTCACAACAGTCAAGAGTTGGTTGCTTTATCCTGTCTTTGTGGATAATGAAACTTAGGCTCAGAGATGCTGGAACACTACAGGACATGCAGCTGAGGTCCTAATCCTAATAGGAAAAGTCCTTCTACCTGCCAGTGGGTCCTAGACAAGAATCACCTGAGAGCACTTACGGATAATAACAAAATGCAGAAGAATCTTTAGATACTTGCTACCCACTAGAGAATCCATGCTACATTGTTTGCAGGTTTGCAGTAGGTCCAAGGAAT TCONS_00001326 . 5' 1586 TCONS_00001326 . 5' 1586 EMBV3_23459 CACTTGACCCTGGACTTTGGGGAGGATATACAGTGGCCGCTCTCGCTACCTTACAACAAT Gene GeneID:538521|TGM7:XM_002696747:375_cdna Constitutive 0 NULL GeneID:538521 21 GENE TGM7 NULL transglutaminase 7 EMBV3_24991 CACCAAATATGGGAACGTTTAACCACACAGGAAGAAGTTGGTGGGTTTGGAAAGTCGCTG Gene BVT0102_287994 + 0 NULL GK000006.2:70783548-71051427 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205519 1 XLOC_124666 Coding TCONS_00205519 XLOC_124666 NonCoding Coding - 6:70894297-70898177 - TSS153448 3367 1 TCONS_00205519_3 82 0.578556578556578 3 0.132766176849703 0.000946673458512846 0.000492188040118915 0.000761753233537215 0.000913074888192877 0.000528542944763177 0.000116265368479471 0.000542463705618473 0.000728272122276479 0.000678751953715929 0.000328507346098288 3.39944281329914e-06 2.82617236162125e-05 3.68791918171717e-05 0.000134800316745567 0.000387229627469902 0 0 0 0.000733335734806443 0.00097126284310669 0.000316301223217227 0 0 0 0.000399304623510031 0.000525666591053469 0.000564019980996568 0 1.44181708358064e-06 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 8e-110 403 93.63 0.0781110781110781 XM_005271124.1 S100PBP PREDICTED: Homo sapiens S100P binding protein (S100PBP), transcript 1e-43 183 76.01 0.0795960795960796 0 noncoding 0 0 0 0 -0.60772443778834 0.0112009289292152 0.0410689656295343 0.541633391359852 GATGTTTATTAAAGATAAATGTGAAGCACAGGATTGGGCCTAGAGGAGCCACCAGCTGAAAGCTGTTGACCACACTGCCTCCAGCTGGGCAACAAGGCCTTCCTAAAAGGGCGGTGTGGCGGCAGCTTTCCAAGTGAACCACAGTTACCAGTCAACAGCACTGAGTTGGCAAGTAGTGAAACGTTGCTCCTGGGGAAATACAGGGCCTAGGTTCCTGTGAGCCTCTGATCACAACATTGTCACCAATAGATCAATACGTGACCTCGTTTGATGCTCATTACGGCCTTCTAGTACTCAGAAACACAAGTCCAGCTTCAGAATTGAGCCTGGGGGCCATTTTAAAACAGCAAAACCACCAACGAGAAGCACAAAATATAGCACTAAATAGAGCTTGAAAAGGACACATTTGCAGGGTGTGAACTGAAAAAAGAAGTCATCAAGTCACCTGTCCAGTCTCAGCTGAGAACTTGCGGGTCCAGCAATACAATTTTTTGCTCCTCTGCACATCTGCAAATGACTGTGGAAGCATTGTTTCTACAGGAATCATTCATTTGTTCCAGGATCTCTGGACTAAGAAGAAATTCTCTTCCACATTCCACTCAGCATAAGCTATGCTTATCCTTTACTTGCTAATAAAACAGCAGCTTGTGTTTAATGTGGATTGATTCAAATAAGAGAATTCAGCGACTTTCCAAACCCACCAACTTCTTCCTGTGTGGTTAAACGTTCCCATATTTGGTGAAAATGGAGAAAGGAAATAACAAAGGATTGGATATTATCCTAAAAGCTATTTGTTTACTTTAAAAGTCTTAATAAAAAGATTTCTCCAATTTATTTTTCATAACTTCGTAGGAAGCAAGAACAATTTCTGAGAAAGAACTGGTTTTTAGACCAAAATGTCATTTAATCTCCAAGTATACTGTATATTACTTTAAAGTGCTACCTGGGGTTTGTAATCTAAGATGTCCAGCATCGATAACATTGCAAAGATTCTCTGATAATCATGAGGATGCAGGTTTATTTCCTTCAGTGGGGTGTCCGTTAAAAGCATACAAACTTTTTAACTGGCCTCCAGCCTCTGTGCCATGTGATCTACCTGCATTTTTCCATAATTTGTGAGCACCAGCTGAGGTTTTTTAATAGTTGAAGCTAATATTTGTTAATTCAAAGTGGAGGTGATTTAAACCAAACCAAAGATAGCATGTATATATATTTTTTAACAGTGAACCTATGTTGGGACCTTTGTTCTGTTTTCTTCTTCTTTGTGCTTTTCTTGTTTTTGTAAAAAAAAAAAATGTCAGCTTTATTAAGGTATAATTGACAAATTATAAGGTATTTAAGTGTACATGTGATGATTTGATACATGTTATGAGAGAATTCTCCCCATCTAGTTAATTAACACATCCATCACCTCACATATTTATCCTTTTTTTTTTTTTAAAGAGAACATTTAAGTACTGCACTCAGCAAAATTCAGTTATACAATACAGTGTTGTCAACTATAGTCACCATGTTTGAAGTTAGATCCTCAGACCTTGTTCATCACACATCTGAAACTTTGTACCCTTTTTATCAACATCTCTCTATTCCCCAACCCCCCAGCCTCTGGCAACCACTGTTTTACTCTGTCTAGGAGTTAGTTTTTGTGTGTGTGTTTTTTTAAGATTCCAGGTATAAGTGATACTTTGGAGTATTTGTCTTTCTCTTTCTGCCTTATTTCACTTAGCATAATACCCTCAAGATCCATTCACAAATGGCATGATTTCTTTCTTTCTGAGAGCTGGATAATATGTTACATCTCTATCCATTCATCTGTCTGGACATTTAGGTTGCTTCCATGTCTTGGCTATTGTAAATAGTGCTGCTATGAACATGGGGCTGTAGTTATCTCATTTGATACCCTGTTTTCATCCCCTTTAAATATATACTCACAGTTGGAATTACGGAATCATATGGTAATTATATTTTTAATTTTTCTGAAGAACCTCACTATTGTTTTCCACAGTGACTGAACCATTTTACATTCTTACTAACACTGCACAAGGGTTCCCTTTTCTCCACAGCCTCGCCAATACTACTATCTCTTGTCTATTTGGTGACAGCCAGTCTAACAGTTTGGAGAAGGCAGTGGCACCCCACTCCAGTACTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGAGTTGCTAAGAGTTGGACGCAACTGAGCGACTTCACTTTCACTTTTCACTTTCCTGCATTGGAGAAGGAAATGGCAACCCACTCCAGCGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTTGCACAGAGTCGGACACGAATGAAGTAACTTAGCAGCAATCTAACAGTTGTGAGGAGATAACTAGTTGTGGGTTTGACTTGCATTTCCCTGATTAGTGATGTTGAGCCCCATTTCGTGTACTCATTAGCCATTTGTCTTCTTTAGGAAAGTCTCTATGTAGTTCCTCTGACCACTTTTAAATTGGATTGTTCTCATGCTACTGGGCCTTATGAGTTCCTTTCATATTTTGGCTACAAATATAACATAATTGATAGTCCAACTTGCTAATCCTGCTCGCCAGGAGGGACTCTCCCATTCTGAATGCGGCTTCCAGATAAGGGCAAAGTCTGTGGTCCCAGCACCTGAGCATCCTCAGAGCCTTCACGACAATTCTGCTTCCCCAGGTTTTTATAGTCCTGGTTCCCTTCTTGTGGGTCGTAGCCCATGATGGCAGCAGTAGGTTTTGATCATCACAGAATACACTCCTGGTGTACGTCACCTGCTTCGTTCTCTGGACCACAACTTTGCGCCCTGAGCGGCAGCTCACAACTATGTTGCAAACAGGTCGTCAGTATATGTTCCTCCTCAGCCTTCACGGTGGTCACGTGGCCCCCTGGAGAGGTTAGAGCCCTGGAACTCCCACCCCTGGCCTTGAATAGCCTCATTCGTATCTCACACATAGAACACAAATGATCATTTTCCACAGGTACTGGGAGATGAATAGGTTGGGAAGCACCTCTGAAGACTAAGATGCAGCTTGGCTTTGGGAATCTCGAAGCATCCCTCACTACCTCAGTTCTGTGTGCTAGACTCTCTCTCCAGTACCCGGTTGCCAGTCCCCAGAACAACTGACCCATCTTTAGACTTGAGACTCACTTGCTTCATTCCCATGGCAGAGACTGACTGGATGGTCACCCAAACCACTTCTCTCTTGGGTTTAGACACAAACTGCATCTCCAAGGCCCTTGCATCCAGGCAGGGGTGTGAGGACTAACTCTGGCTGATGGACTGTAAGTGTAAATGATGTATCACTCCTGGGTTAAG TCONS_00205509 s 3' 378 TCONS_00205509 TCONS_00205509 s 5' 0 EMBV3_34598 GGCACTTTTGTTGATGTTTCTTTCAGAGTGTTGTGGGAATCATTTCAACCAACAGGATGG Gene GeneID:281135|S1PR1:NM_001013585:14_cdna Constitutive 0 NULL GeneID:281135 3 GENE S1PR1 EDG1 MGC137514 S1P1 sphingosine-1-phosphate receptor 1 EMBV3_11948 ACATTCCATGTAGACGACAGCCACCGCCCCAGGCAGAGCTGCTGTCAATGTAGCAAATAA Gene GeneID:510792|ATP13A2:XM_002685742:488_cdna Constitutive 0 NULL GeneID:510792 2 GENE ATP13A2 NULL ATPase type 13A2 EMBV3_25150 TAGGGGTTCTCTTAAGGCACACCAGCTGCCTGTTTTGCATGGTATTTGCAAAAATGCCTC Gene GeneID:616227|CAMK2N1:NM_001114520:281_cdna UTR3_Alt 1 NULL GeneID:616227 2 GENE CAMK2N1 NULL calcium/calmodulin-dependent protein kinase II inhibitor 1 EMBV3_36690 ATACGAGGTGGCGCTGGAGGCGGAGGAGGACTCGGCGCACCCTCGGGAGCAGAAGCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34461 TCATACATAACTGTGATTGAAATTTGGTTTTGATAAAATTATCTTTTTTAATGTAGGATA Gene GeneID:538632|SFRS2IP:XM_002687322:135_cdna Constitutive 2 NULL GeneID:538632 5 GENE SFRS2IP NULL splicing factor, arginine/serine-rich 2, interacting protein EMBV3_24838 CAACCCTCCCCATTATGAGCTAATCTACCAGCGTCATGTCTACAATCTTCCAAAGGGCCG Gene GeneID:510567|TMEM209:XM_002686941:66_cdna UTR3_Alt 2 NULL GeneID:510567 4 GENE TMEM209 NULL transmembrane protein 209 EMBV3_31094 CACAGGGGTCATGGGCAACATCCAGGTGGTGGAAGAAACCCAAGTCATCCTTCGAGAATA Gene GeneID:535603|ADCY3:XM_002691464:320_cdna Constitutive 0 NULL GeneID:535603 11 GENE ADCY3 ADCY8 similar to type III adenylyl cyclase EMBV3_01770 GGCCTTGCTTAGAATCAAGCAAGTGAGAAAGGAAGAAGTATGTTTGCTTACTTAATGACT Gene GeneID:528920|EVI2A:NM_001034568:262_cdna Constitutive 0 NULL GeneID:528920 19 GENE EVI2A MGC128458 ecotropic viral integration site 2A EMBV3_03099 CACGCTCGGGGCTGGATGTCCATGAGAGACAAGGAGAACTTCCTGATACTGAGCTATGAA Gene GeneID:514658|SULT2A1:XM_002695189:861_cdna Constitutive 0 NULL GeneID:514658 18 GENE SULT2A1 NULL sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 EMBV3_32970 TCCTGAGTCTCTATAAAGGGTTTTTACCATCTTGGCTTCGAATGACCCCTTGGTCACTGG Gene GeneID:536813|SLC25A27:XM_002697265:13_cdna Constitutive 0 NULL GeneID:536813 23 GENE SLC25A27 NULL solute carrier family 25, member 27 EMBV3_10713 GAAGACTTTGCCAAATGTCCGGAGGCCACAGAGCTCACAGAAGAGAAGGAGGCTGAGGAC Variant GeneID:788135|FOXR1:XM_002693081:421_cdna 445^519 2 EMBV3_10013 GeneID:788135 15 GENE FOXR1 NULL forkhead box R1 EMBV3_29848 CATAGTGATCTAGAATCTCTACAAAGTTTTCACAGGAAGACAGAAGAAGCCTTTAGTATG Gene GeneID:511531|LOC511531:XM_002686268:94_cdna Constitutive 2 NULL GeneID:511531 3 GENE LOC511531 NULL similar to guanylate binding protein 1 EMBV3_19870 AGCAGCTTTCTGGACAGTGGCTGCGACCTGATATTCACATGAAGGAGAAGCTTGTGGAGA Gene GeneID:787178|LOC787178:XM_002688770:96_cdna Constitutive 0 NULL GeneID:787178 7 GENE LOC787178 NULL similar to SCAN domain-containing 1 EMBV3_00177 GTCAATATGTGTCTCAAACAAGGGCTGCAAGCCTCAGAAGGGGAAGAGAGCACTTTGGAG Gene BVT0102_116258 + 1 EMBV3_33138 GK000003.2:106792957-106806509 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179953 1 XLOC_109723 NonCoding TCONS_00179953 XLOC_109723 NonCoding NonCoding - 3:106800015-106800878 - TSS134712 863 1 TCONS_00179953_2 49 0.0741599073001159 1 0 0 0 0 0 0 0 0 0 0 0 8.75353451629383e-05 0 0 0.000267086460288833 0 0.000765111752759436 0 5.81481575231414e-05 0 0 0 0.000275158777232262 0 0 0 0 0 0.000211469390164317 0 0 0 noncoding 0 0 0 0 0.000229320185926196 0.998347892114937 -0.0449666506375682 0.446072084339725 TTTTTTAATGGAAGTTTATGAGCATGCAAACATGATCACAGAATAAGTCAATATGTGTCTCAAACAAGGGCTGCAAGCCTCAGAAGGGGAAGAGAGCACTTTGGAGTCATCAAGAGAGTTCTTGTTGGAGATACTGTGACTTTAACTGGAACTACAAGTCCCAGTAGTATTTGGCTAAGTGAAGAGGAGGAAGGTGTTCTAAGCTAAGGGAATAGCTATGGGGAAGAGAGGATTGGGCAAGTTATGTGAAATCTGGGGAGGGATCTGGTCTGATTTTCAGGCCAGGTAGTCTCATTTTTGTAAAACAAGAGGAGTTGCACTAGATTTCTAAAAGGATCCTTTTACCACAAACATCCTCTGTGATTCTTTGAAATAGGGAAGTCAAGAAAAGAAACCGATTGTGGTTTGGGACACAGTTGAGATTGAGGTGGTGGGATCATTCAAAATAGAGCACCCAACAGGAAGTTGGAAATGTGACATTAAAACTTTGGAAAGGCAGTTGAAATGAAGATACAGGTTTAAGACTCACCAAGATACAAAGCTGATGAAGGCCCACAGTGCTAAGTCACAGGAAGGAGAAAGGGCCAGAGAAGCAGAGGAGGGGGCTTGAAGAAGCCATGAAATTAGAAACAGAAAGGACCTCTGATGGCTCTGCATCTTTTCTCCTTTTGCATCTCCCTACTCTGATTTTGCAGCCTTTGGGGATCCCTGTGCATGTGTAGGCTCCCTTGGCGATATGGGAAGGCAGGAAGTGAGCTCCTTTTGCGAACAGGAACTTGGGATTACTACCTATGTGATGTTTGGGCAAATCACTCAACCTCCCTGAGTCAGAAGTTTCCTTCTTCTGGTGTGCTCTGGAGAAA TCONS_00171170 TCONS_00171172 . 3' 4248 TCONS_00171170 TCONS_00171172 . 3' 5110 EMBV3_36172 ATTGCTATTGGCATGATGAATAAGGTAATAATGTTTGGACTACAGGACAATGGTGCTGTG Gene BVV0102_304832 + 0 NULL GK000020.2:20860585-21814395 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35758 GGAACAGTGAACCCATGTGTGCTCTGGTAAACTGTTTCCTTAAATGTGAAATGGTCCCTG Gene BVT0102_377972 + 0 NULL GK000003.2:117900880-117913715 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171543 TCONS_00171546 TCONS_00171545 TCONS_00171544 TCONS_00171547 1 XLOC_103833 Coding TCONS_00171544 XLOC_103833 Coding Coding RBM44 3:117876974-117905966 j TSS127931 2861 1 TCONS_00171544_2 596 16 0.901866096374737 0.00145799169989587 0.00115470719825605 0.000138466775893481 0.00104113640515119 0.00157117333085965 0.000198711566571512 0.00073398339211238 0.000571050328618088 0.00180193909496525 7.10263910114875e-05 1.40898918015865e-48 1.80531420208231e-30 4.84391385637695e-14 0.00018444418566342 1.64902816199176e-49 2.67616570551015e-12 1.36562349830457e-17 7.89574751068008e-20 0.00057242899863028 0.00171418432392914 3.33293146379243e-08 3.51567105260187e-20 8.30374647850054e-24 1.07979888990962e-115 0.000601940198373505 0.000816295851187028 7.72962537365543e-06 6.97742460977917e-05 7.39942733468109e-09 8.94364451033357e-151 XM_001256090.3 RBM44 PREDICTED: Bos taurus RNA binding motif protein 44 (RBM44), 0.0 4709 100.00 0.912268437609227 NM_001080504.2 RBM44 Homo sapiens RNA binding motif protein 44 (RBM44), mRNA. 0.0 2284 79.20 0.920307584760573 TCONS_00171544_2 sp|E1BC15|RBM44_BOVIN RBM44_BOVIN RNA-binding protein 44; 0.0 1130 98.43 0.958053691275168 2 coding 1 1 1 1 1.33565649541546 0.0185929187204569 -0.0071232604948965 0.877717069436702 CTGAGCCGCCGGCCGTTACCCGACGGGCCCCGCGGCTGCACGCGGAGCGCCACTTGCTCTGAAGCGGAGGCGCTCGCGACTGGAGGCTTCACGAGTGGCGGCGGCAACAGCGCGGTTCTGAGGATATACATCCTTGAGTGATGCAAGCCACTGCAGTGGTTGAGACAGCTTCTAATAAAGGCTACAACAATAATGGAAGAAACATTCAGAAAGCAAGCAGGGCAACAAGTGCAAGATCGTCTGTAGTATCCACATCAAGCAACACAGAGATAACAATGATGAATAAAAAACGGCCTAGTGAATGGCAAAGTGAGAAACAAAGAAGTGTGGCTTGTAACACAGATTGGTCATACATTCAAGATACTGAAGACCCACAGATGGCTATGACAAAAGGGCCCACAGGGAAATCTCTCTCTGTTGACAATTTAAAACCTAATGGAAATGTCCTAAATAAGGATTCCCTGGAGTTAAAAACATTTGAGTTCACAGACTTAAAGAAACATTCTGAAAGGGAATCTCAGCTTCCTAAAGAGGTAGAGAAGAATTTGCCATCGAAGTGCTGTCAGCAGATAATGCAGAGAGCCATCCAGGCCGAGTCGCACCTTTTAAATGTTCACTATCAGTTGTGCCATCGCCACTGCAGCGATATTTACAGACTTGTGATGGAAGATAGGGAAGGACTAAACAGGAATTTATCAAGTAATTCTACTAGGAAGGAATTAGGATCAGCACTGCTGTCGGTTTTAGGAGACTTGAAAGTTAGATACATGAATTTGAAAGAGAAGATAAACAAGGGTATACCACTGGAAGAACTGCCTCCCTTGTCAATAGAATCAAGATTATTATCTGCCTTCTCTACTTTTGCTTCCAGGCTGATGAAAGAAGAGTCACATATCTTTTCAGGAGCAGATTCTGAACTAGATAATCAAAGTACACGTGATGTTGGTTCTTCTAGCCTAAAGAAGACACTCTCTCAAACATCTCTGTTACTTGACAATGGTCATCCTAAACAAGATAAATCACCCGAAGAGGGTGGTTTAAAAAATGGTGATATAAATGTAGACTTGAGTCAACTAAAACTTGATGATAAAGACTGCAAAAATTACCGAGAAGTAAGTGAAGACTGGTTCGATGCTAAAGAGAACCTGACTGGAGCAGACTTCTCAGGAATACAAGAAAATCAGATAGAACAAGACAAAGGGGACCCGAAGTTTACACTCGAAATAAAGAATGTGGAGCCCTTACGAAAAGATAAAGGTTACTTGATGCACGTTGGTGGCCTCTGCCCTTCAGTGTCTGAGGCTGATTTAAGGTCTTATTTCCAGAAATACGAAATTTCTGACATTTCAATTTATGATTCTTCTCCTAATTACAGATATGCATCTCTTGCTTTTAAAAAAAACAGTGATGCAAAGATGGCTGTGAAAGAAATGAATGGCATAGAAATAAAAGGGAAATCAGTAAATGTGCGGCTTGTCAAAACTCCTGGAGAATATACACCACTTTCCTCCAAAAATGGAAATAAAGTTAGTTTCAGTAATTTGGAAAAAAGCACCAGCAAAGAAATGAGCTCACCATCCTCTGTTTCTAGACTGCCCAGAACTCGGCCGAGACAGCCGGGGTCTGAGCAAGACAGTGAGTTCTTCCCTTTTGACCAAAAGGGTGTAAAGAAGAATTGTAAACAGATTGAGTCTACTAAATTATTACCTGATACACCTATTCAATTCATACCTCCGAAAACATTGAACCTGCGTAGTTTTACCAAGATCATAAAGAGACTGGCTGAACTACATCCAGAAGTTAGCAGAGATCACATTATAGATGCTCTTCAGGAAGTAAGAGTAAATCATAAAGGTTTTCTGAATGGCTTATCTATTAATACTATTGTGGAAATGACTTCCTCTGTTTTGGAAAACTCTGCTTCCAGTTAGGAATAAAAGAAGCAATAAGAGAATTTCCTTGGAAAGCATGACTTCCTTTCTACAGAGAATGTTCTCCGGCACTTACAAAAAAATTGTGGTAACAGCAAAACAATATAGTTAAATAGGCTCGATAAATGGGGTTAGCTGTTTGTAATATTGTACTTTATATAGCCATCTCTTAAAATCTAGCAACTGTTGTTTTGACAATATAAAGATCTCTATATAAATTAAAAGATACTTTTTAATGTTTATAGACTTTGTATTTCAAACTTGTCACTTAGAGACTTGAAGCTGCATGTTTTGGAGCAGAGACAAAAATGGTGTCAATTTCAAAAATCTGTGTTAAGTCAGTTTTAAAAATATTGACCAATAGAAAGTATGATTTTATATGTGAAAAATATAATTTACCTGAAGTTTAGTTTCAGTTTTCAGTTATCTTAAGACTTTTATATTGGGCCATAGCATAACAGATAAACTGGATCTACAGATACATATTTTGTAATGTTTTTAAGTTTCCAAAATAATTACTGTTGTGATGCATTAATAGGTTTAGATGTATGTTCCCTGTTTTCACTAGGAACAGTGAACCCATGTGTGCTCTGGTAAACTGTTTCCTTAAATGTGAAATGGTCCCTGTATTGATTATGTTCATTTTGTAAGAAGTTCTATTAGGTTAGAGTGTATATTGGAACACTTTTCAAGACCTATTCTTTGGCTTTATCTGATAACATAAATTACTTTAATTGCTTACTTTTAAAGGTAACATATTGTTTAAAGTTAGAGTCTTATTAATAGTAAGATGAACACTTAAATATGCATTTTCTTCAAATGTTTAAAATGTTTATAGCATTCAATATGTAGCTGGTATTGCTTGATTAAAAGTTACCTATTTAACATTTACATTTGGTGTATTATATTTAATAAAGGTAGAATCTGAAA EMBV3_43138 AGCGCTTGGGAGAGCAGAGATGGAGACCCGACTGCCGCACGCCGGGACCTGCTGAGCTTT Gene BVV0101_070451 + 1 EMBV3_29256 GK000015.2:17375064-17400718 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058391 TCONS_00058387 TCONS_00058389 TCONS_00058390 TCONS_00058384 TCONS_00058392 TCONS_00058388 TCONS_00058385 TCONS_00058382 TCONS_00058383 TCONS_00058386 1 XLOC_036085 Coding TCONS_00058392 XLOC_036085 NonCoding Coding ELMOD1 15:17375438-17415361 j TSS43999 465 1 TCONS_00058392_1 35 6 0.988502580031061 0.00126524496459894 0.000863660570055908 0.000312027158882398 0.000471410329745421 0.000872663198509984 9.4008941486798e-05 5.6071311634817e-05 0.000231573900906029 5.46727560085065e-05 9.23633153941347e-05 2.73578777014067e-05 2.93940846127449e-34 0 0.00012814664625059 2.42052370927561e-44 0.000273645533708091 0.000351821849193485 0 0.000116195001346983 0.00121291472253169 7.2948896416973e-154 2.73055585766791e-165 0 0 0.000106721494202444 0.000653941991795735 0.000116262493892349 0 0 9.14532800568927e-05 NM_001078108.1 ELMOD1 Bos taurus ELMO/CED-12 domain containing 1 (ELMOD1), mRNA. 1e-40 170 97.98 0.210752688172043 NM_018712.3 ELMOD1 Homo sapiens ELMO/CED-12 domain containing 1 (ELMOD1), transcript 4e-14 82.4 79.17 0.195698924731183 0 noncoding 0 1 1 1 0.0152348063214958 0.901352624669185 0.0247675547077792 0.607748438898676 CAGCGCCGGGCGGAGCGCGCAGCCGGAGCGCTTGGGAGAGCAGAGATGGAGACCCGACTGCCGCACGCCGGGACCTGCTGAGCTTTTGCGGCCGCCGAGTTCACGCAGGTAGAATTGAACAGGCGACTGGGGAGCGACGGCTGACAGAGCTATTAAAAGCAAAACAGCAGATTCTTTACCAGATGAGCCATTACTCAGCCACAAAAAGAAACAAAACGGGGCCATTTGTAGTGAGGGTATTGACCACAAGTCCATGGAGAAAGTCTTACGTCATGTATACTTTTGTCTGAACCTGGACATCTAGAAGCTGGACCAAAACTCTTAGGATTCCTTGGAGGTGGCCAGGCAAGTTTACTTTGACAAAGGCAAATTTGGAGACACTTACGACCAGTTTGTATAACATCTGGATAATCAAAATAGTCACAATGAAGCACTTCTTGAGAGTTCTGTTGGAAGAGTGCTGTC EMBV3_21565 GTTCCACTTGGGCATCTGGGGCTGAGTCCCCTGGAATCTCATATCACAAATTTCAATAGC Gene GeneID:510736|LOC510736:XM_002700167:87_cdna Constitutive 0 NULL GeneID:510736 X GENE LOC510736 NULL similar to HEPH EMBV3_08906 TGGAGAATGGGAAGCCGGGAGCTGATGTGGTGGACCTAACGCTGGACAGCTCGTCGTCCT Gene GeneID:534722|PIAS4:NM_001083482:57_cdna Constitutive 0 NULL GeneID:534722 7 GENE PIAS4 MGC142540 protein inhibitor of activated STAT, 4 EMBV3_25037 AGAGAGGACTTTATGGGTATTGCATCTCAGCCAACTCCTCGCCGCCCTGGGAATTTTCCT Gene GeneID:508118|LOC508118:XR_084111:333_cdna Constitutive 0 NULL GeneID:508118 29 PSEUDO LOC508118 NULL similar to zinc finger and BTB domain containing 3 EMBV3_07122 GCCGGATCAGCTGCCCGGCACCCGGAGTCGGACCGAGATGTCCAGCTGTCCAAGGCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21571 TTTTCTGCCAGGGTCTCAAGACAGCACAGTTCCATCAGGTTTCCAGGTGTGAGAGTGGGC Gene BVT0102_164454 + 0 NULL GK000017.2:53027511-53067548 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077260 TCONS_00077261 1 XLOC_047031 Coding TCONS_00077260 XLOC_047031 Coding Coding BRI3BP 17:53062202-53088676 = TSS57805 6246 1 TCONS_00077260_1 242 0.132244636567403 3 0.764174819627545 0.000246929665399432 0.000110799852641862 0.000269054987003143 0.000675755333843061 0.00055549235535106 1.41715788230047e-09 0.000318802217571214 0.000369971598993263 0.00088339045750422 0.000154864914012594 6.47058132231113e-05 2.37409645806138e-05 9.59008640474231e-05 0.000157672426644684 0.000156272652502439 0.00238264197316094 0.00100007481810027 0.00141281903661542 0.000172009938473037 0.000331653345913548 7.07979711165287e-05 0.000804542825347863 0.00132272845118194 0.00239507332869475 0.000466038276124674 0.000320903676042815 0.000218858272156293 0.000361782947191892 0.000116237550573089 0.000247444809268767 XM_005217899.1 BRI3BP PREDICTED: Bos taurus BRI3 binding protein (BRI3BP), transcript 0.0 1.050e+04 100.00 0.931476144732629 NM_080626.5 BRI3BP Homo sapiens BRI3 binding protein (BRI3BP), mRNA. 0.0 1330 83.73 0.194684598142811 TCONS_00077260_1 sp|Q8WY22|BRI3B_HUMAN BRI3B_HUMAN BRI3-binding protein; 1e-116 338 85.66 0.995867768595041 1 coding 0 0 0 0 -0.0581142145921177 0.656257220577514 0.00408259706131859 0.954600779269851 AGAGGTGAGGCGCGCGGCCCCCTAGCGCGCCAACGCGATCCCCGCCGGAGCCGCGGCGTCCCACCGTGCGGCCCTCATCCTTCTTCCTGACCCGACATCCCGCCGGCTCCAGGATGGGCGCGCGCGCTTCGGGAGGACCCCGGGCCCGGACAGGGTTCCTGCTGCTGCTGCTTCTGCTCGGGCTGGTGGCCCCGGGCGCGCAGGGGGCGCGGAGCCGCGGCGGCACCGAGAAGAACAGCTACCGCCGCACGGTCAACACCTTCTCGCAGAGCGTCAGCAGCCTGTTCGGCGAGGACAACGTGCGCGCCGCTCAGAAGTTCCTGACAAGGCTAACTGAGAGGTTCGTGCTGGGAGTGGACATGTTTGTGGAAACCGTGTGGAAAGTTTGGGCAGAGCTCTTGGAAGTTCTTGGACTCGACGTCTCGAACCTGTCCCAGTACTTCAACCCCAGCTCGGTGGCCAGCAGCCCCGCCCGGGCCCTCCTGCTGGTGGGCGTTGTTCTCCTGGCCTACTGGTTCCTGTCTCTGACCCTGGGCTTCACCTTCAGCGCCCTGCACGTGGTGTTTGGCCGCTTCTTCTGGGTGGTGCGGGTCATTCTGTTCTCCATGTCCTGCGTGTACATCCTGCACAAGTACGAGGGCGAGCCTGAGAATGCCGTGCTGCCCTTGTGTTTCGTGGTGGCCATCTACTTCATGACCGGTCCCATGGGCTTCTACTGGCGAGGCGGCCCCAGTGGCCCCAGCGTGGAGGAGAAGCTGGAACAACTGGAGAACCAGGTCAGACTGCTCAACATCCGCCTCACCCGTGTGCTGGAGAGTCTTGACCGCCCCAACAGCAAGTGACAACCAGCCAGCCGGCCGGCTCCCCCTCCACCAGCGCCCTCTCTCCGGAAACAAAAAAGAAGAAGAAAAAAAAGAACGCCAAACCCCAAACAATCTTAATAAACATGCCTGAGCAAGAGAGGGGCGCTTTGTGAGGGTGTTTCCGGCCACGTGTCAACTCTTAGGACATCTTCTGGGAGGAATTGACAAGATCGTTGTTGTAGGACTACCCGCCAAGTGTCATTAGTGGAAAAAAATATTTTTTAAACAAAGGATATAACCATATTAGCTGTACAGTAAGAGAAGTTTATCTGTGCATAGAGCATAAAGTTAATTTTTTCAAGCATTTAAATACATCTTTTGTAAGGTTTTTTAATAAAGGCAGATTGAGTTGAGTTTATTAAAACTTTACACAGAGGGGAAGAAATTGCTAATTCGACCTTTTGGGAATGTTTCAAGGCAGGTGTTTGCTTTTGCAGCACAGGGATTGGTGGGTGAGGTCTGTGTGCGTTCTTTTCATGTTCCAAAGCTGTGACCTTCATTTCATGTTGTTTTTGGTTGATGTTGATTTGATGAATCGTGTCGCTTCTGAATGTGGACTCTTGGGTTTCAAGGTTGAAACTCAATGTCTTTGAGATCCTAGATGATTCAACCAAGCCCCCATCAATCAGATTTCTGAATGAAGAAGTCATTATTTGTAGAAAACCTAAGATTCCCTCTCCTTTCTGTACTTTGATGTATTTTAACCTCCACATTTTCTAAAGGAAAATTCAAGAACCAGACAAAGAAATATCATTGGAGTTTGATACCAAGAACTGCCTGAGTGAGCATCGAAGCTCATTCAGGTATCTAATTTGAGTCCTAATTTTACCATTGGCCAGCTAGGGGGATATAGGAAAGCTACACTCTCCAGGGTTTTTTGTATACTTATTTCATTTTGGTTTTTGGTTGACTCAGGACCTTAGAAGGAAAATCAACCATAGCAGCTAATAACCTTTCAAGTCTGTTGCTGCTTATAAAGCATTCTCAGGAACAATAAGCAGAAACCCACAAGACTTGGAGAAGATACGATTTATTCTATCTGAAATTTTTACAATATATGTGTTAGGTGCTTTTGGTTTGAATCTGTGGTGGCTTCATTTTAGGTGGTCTCTAGTGGTGAAGAGAACTACATGGGGGGGCAGACAGCTGTGGGGGTCCTGAACAAAGGGGGCTTTGCAAGGCTTGGATCAGGCGCTAGTGGAGATGCCCCTTTCTGGGTACCAAACAAGCACAGGAAATCAAGGAAAGGATGACCCAGGTTTTGCTACTAGGCTTCATGACTGTCTCCATCGGCCTTCCTTGCTCACCGAGTATCCTGGCAGCCCTCTCACAGAGCCCCTGTACACAGGTTTTCAGAGACCCCTGTCAGATAGGGTAGAACCAAGACTTTCTGGTCCAGGTATCCTTTCAGGGAAAACTCAGCCACCTGCCAACTCTTCCTGTGCTGCTTTATTTGAGGTTGCAAGTACCTGGAAAAGAGAAGCAGATGTTTTTCAAGAATGTTTATGAAACTTCTGTTTTTAAGGTGCATATTAACGGGACCCAAACTCTCTTGCATTTGCAGCTCACTTCTTGAAATTATGTACATGTCCTCTAGAATTTGCTTGGGCAAATCTTTATCCATGGGCGTTGGAATACCCTTTGTTTCTGCATTGAAGCCGTTCCAGTTTTGTCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGTCTGGTGGGCTGTAGTCCATGGGGTTGCTAAGAGTCGGACACGACTGAGCGACTTCACTTTGACTTTTCAGTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGACGCAGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCAGGTACTTAGAGACAGATCTGTTTTCACACAGGGTATAGAGAACTCCAGGGAGGTTGTGTTTGCCTTCTTTCCCCTTGTGCATTTGGCTTCTATGTTTCTGGCATGTTTGGGTGTTTGCTTTGCTCATGTTAGGCAGTGGGATAATTGACATTCTCTGCACAAAGATTTTAAGTTTTAAATTACTGTGTGGGTACAACATCCACCCTTCTCTCGCCCACTCTCACACCTGGAAACCTGATGGAACTGTGCTGTCTTGAGACCCTGGCAGAAAAATAATTTTAACTTCTAGTAAATTGAGGAAGGCTCACATATCTGAGTACTGGTAGACTGAGGCCTCATCATCAACTGGAAATTATTGTTAAGAATATATACACCTTGGGATTTCCCTGTGGCCCAGGGGTTAAGAATCTGCCTGGCAATGCAAGGACATGGGTTCAATTGCTGGTCCAGGAAGATTCCACATGCTGTGAGGCGACTAAGCCCATGTGCCACAATTAAGACCCAATGCAACCAAATATGTGAATAAATAAATACTAAAAATAATATGCACCTTGTTTTCTGGATTGGCTAAGTGTAGGCTATGAAGCCAGTTGAACAATCTGATACACCCAAATGAAAGATGTCTTTATTTTTAACAAAAGTTAATTAGTTCCTTAAGAGTGTCTCTTCAGGGTAGAATAGTCCTTGAAATTCTGATGAAAGTCACGGAGGTTTGATATGCGTAACTCCTGTCTTTTAATGCGTAAATTCGACTTTTGCTTGGACGTCCTCTTATCCTCAGATAGTTTGGATTTTTTTTTTTTCTTCTTTCCATGGAAGCTTGTAGGATAATTGACCTCCCCCAGGACCCCTCATCTCCTTTTCTCTCTCTTTTTGTACATGAGAAATGTATTTTTGTATCATATCTCATACCTTGAGGAGAATTTTTTTTATATCTTCAGGGCTGTAGAATATATTAGTGTAACATCATTCGATGTGATATGAAAACATCCTGACGAAAACTACTGTGAATCTCTCTTATAGTTAAAACTCATTTTTTTAGATATCTTCAAGTTCATCAGTGTTAATTTCCCAATGCTTCAATATCGCAGTAAATACCAAGAGCAGAAAAGAGCCCAGAAAAGAAAAAGAATCTGTTATCTCCACCTTGCTGGATTTCCGTGGATATTTTGGGATCAATGTTTGGAGCAATCTCTTCCTTGACATCCTGGCAAAGATGCTTTTGTGGCACATCAGCCTTTCATATTTTCCATTTTTGTATTTTCCAATACCAATCAGCATTACTTGCCTTCTGGGGTTTTTTTGGTTTGCTTGCTTTTTTTTTTTTCCCCAACCCCATATCATTTCTTGTAGCAAAATGCAACAACAGAATTTCCTGAAAGCTGGCCTTGTGAATTATGCCAGGGTCTTTAATTTATGAAGGGGACCGAGTGACATCATGGAGAGAGGTTAGTGCCTTTGAAAGAGATTTTAAATACCCATAGTTGCCCAGAGACAACAGGCACACCATGCCTCTCAAGACCACAGGGAGCCTGTCACACATGGGCTCAAGAAGCAAACAGGAGAGCAGGATCTGTGCCCTGCTGACTGGCAGGGGGTAGCTAGTTGGAGACATTGCCTGTTGGCACTAAGGGTGAACATGCAGGGTGGCGTCAGTACTTGGGAGGGTTGTGAAAGGACTTTAGTACACCCACCCACCAGGGCTGGCTTGTGGGGAAGATGTAAACCACTTTGGTGGTGTTTCAGTAGCCTTCTAGAGAGGTTAGGAATATGACATCAGACGTCCAGTGCAGAATCTAAAGCATGGACAAGACACCTTCTCACTATCGGGAATCCTGCTTTATTTCATCCTCTTGCTTCCTGCTACATTTTGTTTTTCCTTTTTTTTTTTTTTTTCCAGCTGCACTGCATAGCTCATGGGACCTTAGTTTCCCACTCAGGGATGGAACTTGGGTCCTCTGCAGTGAAAGCATGGCATCCTAACCACTGGACTGCCAAAGAAGTCCCTCTGCTACTTCTTAAGATGCTTTTGAGGAAGGCTATCTGCCTTATAGGCTGATATCCGATCACTTCTCCCGATGGGTTTTTAATTGACTGACTGAACCAAAAAGCCAGCTCTTGCCATCACTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATGGGGGCTTCCCTAGTGGCTTAGTGGTAAAGAATCCTCTTGCCGGTGCAGGAGATGCAAGAATTGCAGGTTTGATCCCTGGTTCAGCAAGATCCCCTGGAGTAGGAAATGGCAACCCACTCCAATATTCTTGCCTGGAAAATCCCACGGACAGAGAAGCCTGGTAGGCTACAGTCCATGCGGTCACAAAGGGGATGCAACTGAGCACACACACAGCCATCATCTAGCTCACTTTAACAGGCATTTCTGGGGACTTCCCTGGCAGTCCAGTGGTTGAGACTCCATGCTTCCAATGCAGGGGACATGGGTTCAATCCCTGATGGGGGAAATAGCATGGCCAAAAAAATAGAAGGAATTTCCAAGACCTAAAGGTGTCACCCGCCTCCCCCAGCTTTTTTTGGATAATATATCACTATTCTGCAACATTTTTATTTATGGCCATTTGAGTACTTCAACCTTTGCTCCTTATTGTGAATAATAGAAGCATATACTTTTGCAGAATCTAACACAGTAGCCTTCAAATTAGACTTGGACAACCATCAATGTGATAAATAGGATCTGGAATAAACAAAGCTTGTCCAGCCTATTGAAATCTGCACTCTGCTCTTCACTGATTCCTTGATAAGTAGGAGATACACCAGGACCAGTATTTCCCTGGTGGTGGTATGAAAACCTGATTGCCCTTTGCACCATCTACTGAAAATCTGTGGCAGCTAGTGGTGATATCAACCATATGTTCTAATGTCTTTTTGCAGATTTAAAGATTTTATTGTAGTGTCAATTTAATATCCGCATGTGTGTTAACTCTTTGAATACTGTAATTGATTTCTTTGTGATGGTGGTGGTGATTAGCGCTCACTTAAAATCCAGCTTAGCACTTATTTCCCTCTTCTCAACTGGAAATTATATTTGTGAGGTATGGTACCCATGATCCATAGTGTATTCATGAGTCAACTTCACATTTCGTGTATCTGGTTATACATTTTACATGGCATTTAATTTGATACTCTGAATCCATCTGATTTTAATATAGTGGTGTGTGCGTGTGCCTATGTGGCGTGTGCTCACTTTAGTTTCATGAGCTTGGGAAACTGATTCTACAAATACCATAAATAAGCATAAATGTATAACGCTTATTTTTTTGGCAAAGCAATCCGTACATTTCTCTTATTTATTAAATCACTGGCTTTGGTGTTACGTAGAGATATTTGTAGACCAATTTCAAAACAATTAAAATATTGTGAAAATTACATCTTAATAAATGTTTATTGTAATTTTGGTG EMBV3_29811 CCGCCGTTCGTAGCGTTTTATCTTGTCTACACATGGGGAACGCAGGAGTTTGAGAAATCG Gene GeneID:286885|UQCRQ:NM_174805:14_cdna Constitutive 0 NULL GeneID:286885 7 GENE UQCRQ QP-C low molecular mass ubiquinone-binding protein (9.5kD) EMBV3_35653 CCATAGCCTACATGGTAACGGGAACAACAGATCAGTTCTCAACAAGAGCACGGCTCGAAG Gene GeneID:514617|ERAP1:NM_001102003:20_cdna Constitutive 0 NULL GeneID:514617 7 GENE ERAP1 MGC166160 endoplasmic reticulum aminopeptidase 1 EMBV3_41415 GCCCACAGGGAGTCAGGCCCCCAAATCAGAGAATCAGACTGTTCCTCCAGAAACCAAATA Gene GeneID:789814|LOC789814:XM_002695411:39_cdna Constitutive 0 NULL GeneID:789814 18 GENE LOC789814 NULL similar to UPF0470 protein C19orf51 homolog EMBV3_24491 CCTGTGGTGGGGGCTTGTCATTGTTTACTGTTTTATTTACCAACTTCTGGCCTAGGCATG Gene GeneID:531968|RNF44:XM_002689003:35_cdna UTR3_Alt 2 NULL GeneID:531968 7 GENE RNF44 NULL ring finger protein 44 EMBV3_36969 CCTGGGCCCTGAACTGCACCCTCTATCGAGCACTACCTTTTCCAGACTGTGCTTCTCTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26227 AGGCATACCTAGTCTTTTTCCCCCGAGGCAGATCATTCTGAGTGTGCGAGTGTGTGTGCA Gene GeneID:532337|GSPT1:NM_001098071:225_cdna Constitutive 0 NULL GeneID:532337 25 GENE GSPT1 MGC139075 G1 to S phase transition 1 EMBV3_34550 AGCTTTGAGCAGACAGATTAGTTGTGACTTGGTGAGGTGGGTATGAGATGTTGTACACTC Gene BVV0102_217951 + 1 EMBV3_02385 GK000012.2:22773622-22817677 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11739 AACAGGGCAAGCGTGGCTGGGGGTATGTTCTCTGCACCAGGAGAAAACCCTAAGAAACTA Gene GeneID:527550|BCAR1:XM_002694726:37_cdna Constitutive 0 NULL GeneID:527550 18 GENE BCAR1 NULL breast cancer anti-estrogen resistance 1 EMBV3_17483 TCTGAACAAATGGGTAGCATCACATCGTCTTCAAACCGCCCCCTAACCAGACCTGGCAGA Gene GeneID:519320|BDP1:XM_002696286:41_cdna Constitutive 0 NULL GeneID:519320 20 GENE BDP1 NULL B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB EMBV3_42533 GTAAATTTTTTTGAACCCTAGTGCTTTCAATCCTCCTACCTCCAAACCCTATTCCAATAA Gene GeneID:519474|TERF1:NM_001076865:31_cdna Constitutive 5 NULL GeneID:519474 14 GENE TERF1 NULL telomeric repeat binding factor (NIMA-interacting) 1 EMBV3_31697 CGTGGCCTTGACCAGCTACCAGACCAACAAAAGCAGGCATGACGAGCTGACCTACTTCTA Gene GeneID:514170|CSTB:NM_001100362:45_cdna Constitutive 0 NULL GeneID:514170 1 GENE CSTB NULL cystatin B (stefin B) EMBV3_12173 ACAGACCCATGCCCTCATAGGGGGAACTCCTAAGGCATATAGCTTTTGATGAGAGTGCAC Gene GeneID:531996|LOC531996:XM_002686772:85_cdna Constitutive 1 NULL GeneID:531996 4 GENE LOC531996 NULL similar to Expressed sequence AI847670 EMBV3_00791 GAGGCAACAGCCTCTATCGATTTTGAGACTGATAACTTGGTGCAGACCACAGTCAGGAAG Gene GeneID:518080|LOC518080:XM_002684649:42_cdna Constitutive 0 NULL GeneID:518080 1 GENE LOC518080 NULL similar to ATP-binding cassette transporter 13 EMBV3_28537 CCCCGGGAGTCAGAGCTGTACCAGAAGGAGCCGGGACTGTCCCATCTTCTACATGCGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34416 CTCAATTCTCTTGAAACTAGATGGGAAAAAATATTTGTGTTTCATAAGTGCCTGAGCTAG Gene GeneID:538619|HEY2:XM_002690063:24_cdna Constitutive 1 NULL GeneID:538619 9 GENE HEY2 NULL hairy/enhancer-of-split related with YRPW motif 2 EMBV3_29312 TTCTTGGGCCAGGCAGTGGGGCCAAGTTCATTTCCTCCCTATCAGTTCTAAGCCAGTTGA Gene BVV0102_274852 + 0 NULL GK000015.2:28397170-28400683 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27561 GTCACCACAGTCAATTTTAGAACATTTCCAGCAAGGCTCAAACAAATTTAAACTCCCAGC Gene BVT0102_039022 - 1 EMBV3_18224 GK000027.2:33164813-33231775 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36635 TCCTATGCTGTGAGAGGAGAAGAGGGGAGACTTGGGGTGAACTGAGGTAAGGATCAAAGC Gene BVT0102_120366 + 0 NULL GK000010.2:29962646-30038587 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013361 TCONS_00013365 TCONS_00013360 TCONS_00013366 TCONS_00013362 1 XLOC_008102 Coding TCONS_00013366 XLOC_008102 Coding Coding FMN1 10:29675346-29970606 j TSS9943 10349 1 TCONS_00013366_2 637 16 0.965003607002665 1.1941472990562e-06 0.000237729266333366 5.59700041003974e-07 9.56029691686733e-05 0.000253285289774877 1.78258780665075e-05 0.000347833156757955 8.211262891e-05 1.55252134076536e-05 0.00014253315000669 5.23138602252758e-06 3.45777700225932e-05 3.43571217762372e-07 1.45173044794564e-09 0.000163879954564378 0.000355473540474624 0.000179133732142775 4.66525826965894e-06 5.51869600465432e-06 5.14839617695913e-06 0.000102784317676871 1.67179462713246e-05 8.10994106535278e-05 0.000294205673448913 0.000371490552827572 0.000335020287164821 0.00054864871024716 4.60079299658534e-11 1.27410356649225e-05 2.21830723743286e-06 XM_002690725.3 FMN1 PREDICTED: Bos taurus formin 1 (FMN1), mRNA. 0.0 1.850e+04 100.00 0.991013624504783 NM_001103184.3 FMN1 Homo sapiens formin 1 (FMN1), transcript variant 2, mRNA. 0.0 3250 77.72 0.387670306309788 TCONS_00013366_2 sp|Q05860|FMN1_MOUSE FMN1_MOUSE Formin-1; 0.0 835 86.24 0.706436420722135 1 coding 0 0 0 0 -0.00273664709141092 0.981061453337255 -0.000935047887545781 0.985816086765187 TGACAGAATACCAAGCTGCTATTTTACACTTGAAGAGGGAGCACAAAGAAGAAATTGAAAACCTGCAGGCTCAGTTTGAACTTCAAGCCTTTCACATCCGGGGTGAGCATGCAGCAATAACAGCAAGACTAGAAGAAACCATTGAGAATCTCAAACACGAGATAGAACACCGATGGCAAGGAGGATGCGAAGAGATGAGAGATGTATGTGTCTCCACGGATGATGACTGCCCTCCAAAGACTTTCAGAAATGTGTGCATCCAGACAGACAGAGAGACTTTCCTCAAACCCTGCGAAGGTGAAGGCAAGACAACCAGAAGTAACCAAATAATACCTAAAAAGCTGAACATCTCCTCTTTAAGCCAACTCTCTCCCCCAAATGACAACAAAGACACCTGTGTACCACCTGCGGAAGGCAGCTCACTGAATCAGCAGAAAACAACTCCTTCCCCTCCCCCTCCTCCTCCTGCCCCACCACTACCAGCACCCATCCCTCCCCCGCCCCCCCTCCAACCTGGACTTGGACCTTTGCCACCAGCACCTCCACCGCCACCTGTGAATACTGGACCGCCACCACCTCCCCCACCTCCTCTGCCTCCAAGTGCTGGACCTCCCCCTCCTCCTCCTCCCCCGCCTCCCCCTCCTTCTCTCCCTCTGCCCAACAACGGGGGTCCTCCTCCTGCTCCAGCACCCCCAGGACTCGCACCCCCACCTCCGCCTGGACTCTTCTTCGGAGTTGGCCCCTCTTCTGGCCAGTGTCCTCGGAAGCCAGCCATTGAACCCAGTTGTCCAATGAAGCCTCTGTACTGGACTAGGATACAAATAAGTGATAAGAGCCAAAATTCTACGCCAACTTTATGGGATTCCTTAGAAGAACCTGATATTCGGGATACTAGCGAATTTGAGTATTTATTCTCCAAAGACACACCTCAGCAGAAGAAAAAACCTCTCTCAGAGACCTATGAGAAAAAAAACAAGGTCAAAAAGATCATCAAGTTATTGGATGGAAAACGATCTCAAACTGTGGGAATCTTGATCTCTAGTTTGCATTTAGAAATGAAGGATATCCAGCAGGCCATTTTTAATGTGGACGATTCTGTGGTTGATCTGGAAACCCTGGCAGCCTTATATGAAAACAGAGCCCAAGAGGATGAACTCGTTAAAATAAGAAAGTATTATGAGACATCCAAAGAGGAAGAATTGAAGCTGCTGGATAAACCTGAGCAATTTTTACATGAGTTAGCCCAGATCCCTAATTTTGCTGAACGTGCCCAGTGCATAATCTTCAGATCTGTCTTTTCTGAGGGTATCACCGCCTTGCACCGAAAGGTAGAGATCATCACACGAGCTTCTAAGGGCTTGCTGCACATGAAGAGTGTAAAAGATATTTTAGCTCTCATTCTGGCTTTTGGAAATTATATGAATGGAGGAAATAGGACTCGGGGACAAGCAGATGGATATAGCTTAGAAATTCTGCCCAAACTCAAGGACGTCAAAAGTCGGGATAATGGGATTAATCTGGTGGACTACGTGGTGAAATATTACCTGCGTTACTATGATCAGGAAGCAGGAACAGAAAAGAGCGTTTTCCCCTTGCCTGAACCACAGGATTTCTTCTTGGCTTCTCAAGTCAAATTTGAAGACCTTATAAAAGATTTGAGAAAACTGAAGAGGCAACTAGAAGCAAGTGAGAAGCAGATGGCAGTCGTGTGTAAGGAGTCTCCAAAGGAGTATCTGCAGCCGTTCAAGGACAGCCTTGAAGAGTTCTTCCAGAAAGCCAAAAAGGAACATAAAATGGAAGAAGGTCACTTGGAGAATGCACAGAAAAGTTTTGAAACAACAGTAGGATATTTTGGGATGAAGCCAAAGTCTGGTGAGAAGGAGATCACACCCAACTACGTGTTTATGGTGTGGTACGAGTTCTGCAGTGACTTCAAGACTATCTGGAAACGGGAGAGTAAAAACATATCTAAAGAAAGATTGAAAATGGCTCAGGAATCAGTCAGCAAGTTAACAGCAGAGAAGAAAGTGGAGACAAAGAAAATCAACCCCACGGCTAGTCTGAAGGAAAGACTGCGTCAGAAGGAAGCTAGCGTGAGCACCAACTAACACAGACACAGGAGAGCAGTGATGGTGAGGCATAGCACCCGCATGACCCTCTGTAACACCGGTGCTACAAGAAGCCCTCAAAAGATACGTCACTCAATGTTTATTTTGCTCATCTCTTTCCGAGAACCCTGTGCCTTCTTAAAGAAGCCCCTTGTTAAGCCATAGGAACAATGAAATGCTGCTGAAGAAGTATTTGAGAACTGTTTCTTCTAGAGGTCCAAAGTTCCCTCACTACAAGACCAGAGAATTACCAAGATTTTTGAGTTTTTCTTTTTTTAAATCAGGGACCTCAAGCTTTCTAACCCAAGCATGATATATGTAAACTTGTGACAGAAGAAGAGATGGATTTTTTGTGACAGCTGCCTTGAGCAAGTTCAAGCCTTGATCTTTACAATAATCAAGCCTGCATTTTGATTCTATTGCAGCAAGATCCTGAAGCACCCTTCTTGCCAAAAATGTTGAGACTTACCAGAATTATTTTAAGAGGCCCAAGACTGTATGCCCCACACTCAAGAAATGGTTATTTTTTCATTGTTTTTCACGTGTTAGAAAGAACAGAACATGGAATTATACATGGATGGAGAAGGAGGTTAAATAGTCATAAACTTCTTTCTGGAGAACAAATTATAATACAGGTAGTTGGCATTAGCCATTTAGCAAGACCCATTCCTCTGTTTTCATATCAGTTCATTGAGGTTTCCTAGGCCACTAGGAATTCTCTACCCCTTATTTAAAAAAAAAAAAAAAAAAACTATGATAACTGAGCAGCAACAGACTTGGGGTCAAAGCATCTGCTTTGATGAGTGACCCAGTATCAGCCAGAGTTCATTTCACACCTCAAATCATCTATGAGTGGATACACCATGTTGAACTGCAGCTGAGCTGTACACCAGGTTCTGGGACTGAATGTGGCTGGACCTCTCCCATGCACCCTGGGAGGCAGTGTCTAGACAGGAGAGCAAATGCTACTTGGAGCTGTTTATCATGACCTTGACTGACAGACATGTGACCTATGGTTGAAGCAGGGGGGTTTAATGTCCAAAAAAGAGAGGGTAGTAAAAAAGTTCTTTACATCAAAATGGGAAGAGGGTGATTACATTGATATTGAATTTTGAGTTCAATAGGTAGTTTTTTCTGACCCTGGAAGCCCGTGTGATTACTGCCTCTAGAGTCACAGGAAAACCACCTTGGACCTCTCGCCACTCTCCTATGCTGTGAGAGGAGAAGAGAGGAGACTTGGGGTGAACTGAGGTAAGGATCAAAGCCTATCAGGTTTCAGTCTTGAAAGGAAAGAGGTCCAAGCTTTCTCCTCCCAACTGGTGGAAGACCATCTAAAGAAGAGCAGAAACCTTAACACCCTTCCCCATCTGCTGGTCATGTGTGAGCTGCCCCTTGCCCCAGCATCTTGCCAGAATCCCTCACCTTGCCAGGTACCTGAGTGTCTACCCAGGACCTGCCTGCTAGTTATCAGCCCCCACAGGGACCCCATAATAGATATAGCCAATTACAGCAGCACCATATCCTAATACAATGCCCAGGAATGCAGAGTCAGGATCAAATCTAGTCACAAGGCCATATTCCTGCAGGTGCTAGCCAGTCTTTCTAATAATTAAAAAAAAAAAAAAAAGGAATGTAATAACATGGTTTGTTTTTTTTCCCCCAAAAAATAAAAGAATAAGACAAGCAAAACAGAAGAGCTGGTAAGAACTTATATGGCTAATAATAGTTGCTTGTGAGCAAGCCTTTCTTACTGCTTTCTTAGATTGTTTTTCTCTTCATTTTCACTTAATGGTGAGGACCTAAGAAATTCCTCAATTTGAAACAAATCCTACTTACAGCTACCCTGTACTCTGTGACAGTCCTTCTAGTATTAACGGACAAAAGAAAAAGCGCCTGTTTTACCCACGCTCAAGTTGGATTTCATTATAGCAGACAGACCGGAATTTGGCAGTAAAATAAAACCTTTTCTAAAGAGCAAAGTTTGCCTACCTCTGTTGGGAAAACCTAGGGAGTCCAATGTACTGTTAATGTGTGAAGACACCGTGGCAGGATCCCCATGACTCACCCAATTTGCATCCTGCATTCGGCATCTGGACACCCCTCCCAAGTCCGCATGTGGACTGCAGTGCGACGGTGCCCTCATTTGTAACTTGACCTGATGCTTGGTAAAAGTTCACAAGACTTTGTCCAAGGTGGATCATCTTAAACAACCCAGAGGCCCTGAGAGAATCACCTATCCAATATGCAGCTGAGATTGTGTTAACTACAGCAGGTGTCACTAAACTTTTCATGAGTAAGTAGTTGGGGTATGTTAAGTAGTTGGGGTATGGTGAGTAGTTAGCAGCTGGGGCATGTCTGGCTGTTCTTAGCCCAGCCCTGCCTGCACAAGAGGGACAGTGGCCAGTATTTCTACCCTGTGTTTAACCAGACATATTTGACTCACTAATCAGACTCAGAGAAACTTAACTTAAAACAACATCATCTCTGCCTAGTTAAGATTCATTAAAGCTGAGGGCACAGTGGATAGCAGTTCAGATTCTTGCATAACCTGCATAATCATCAAGCACACAAGTATATCATATATGACATAAAAGCATTATATAAACATGTTAGGTGAAAAACAGGCCTATGAAGTATTGAGGATCAAGTGAGGCAGAGGTGTGCTATATGGTTTTTTAACCCAAGAGGCAGTTTATGGGCGGAGACACGGTGAAGGGAAAAGGTAGCCAAGAAGAAATGAATGATATGATGATAGGCAAGGCCCAGGAGTCACAGGTGATACACCTGCTGCTCAGAAGTTACCTTTTGAATCCTTGGGTTGATGTCTATGAAATCTCTTTAAACATTCATTGCAACTACCCAGGAACTATGGAGAAAAAAGTGAAATCTGGGAAGTAGAATAAAGAGATCCAGTCATGCTCTTCCATCTTTAAATGTTTTAGCCAAAACAGTGGGCAACATGATGAGAAACTGGATGCCAGATTGGACTCCGGTCTTCAGTCCTCTTTTCTTCCCGGTAAGAATAGTGTATGCTGCACACCTGCTCAGCCGCTCTTAGGCACATCCTTTTCTCATAAATACCGTAAGGAAAGGCATTTCCCAAATGCTCATATGCTGCTGGTGGAGAAATTAAAGGAAGGAATAAAACTCTTTGGTAGTATTCAGCAAGGTGAAGAAGACATTGGTACAGTCCTTCCAAGACCGTGATCAGATGTATCAAAAGATATGTAAGTGTATTTTTGGTAAAGATTTGCTTGTTGGACTGGGATTACACATCTCTCTCTCTAGATTATACCATCTGCATGGGGAAATTTTAATTTTACTTCTTTGTTGGACAACATATTTTATTTCTATTTCATTCTTGCCTGGTGTCACTAACATAGATCATTGCACACAGCACACAGCACCTAGTCAGCCAGAATATGAAGGGGAATTAGCGGTGCAGACCTGTGGGCTCTTTCCCAATAACCAGACTGTAACACTGACATGGGAACTTCATTCCCTGATGTTCTAAATTGGTCTGTTTTGTAGTACTGCCACCCTTGCCAAACAAAGATAAAACCAAATTGGAGCTTTCTGTGTGAAGAGGAGGAAGAAGTCAAAAAAAAAACATAGCTTTTACCCCCAAAATAACTGATGCAAATATCAAATATCCAATTCTATAATTAGTTTAAATAGTCTAAAAATTGCTAACAAGAACTCTCCACTAGGTTTGAGCTTCATTTTTCTTTGATCTTGCCCGTTCTCATCATTTAAAAACAAAAAGACCAAAAGGTAGAAGGGGAAAAGAAGCATCAGCAGATTTGGAAGTCAACAAATTAATTAGTTCCTGAATCACAAAAGAAGGACATATTGTGAAACCCGGTGTTGTAGAGGTCCTAAGCATATAAGAATTTGAACAGCTGTGAGGACTGATGAGTGTGGACAAAGTAAAGCTCTTAACTGCCCACTTGAGACTTCAGCCTAAACCAGGCAATTTTCATAGTGGGTTCAAGAGAGTGAAGTATTGCTCTGAACAATTTATTTTTGGAAAAATCACATACAAAGAGAAGTGGTATGTAGAGAAAGAAGTGTTAGACAATTAAAATTTCCTTTCTCTGCTTCTCTTGTAAGAGCAGTTCATAAATGGATGGACCATCCAGAAAAGCATGAATACCACACTTCATATATCAGGTTTTTACCATAGAAACACAGCTAAAGAGGGTGGACTGAATAAAGAAATGAACTTTCATTCAAGTCAGCTACTTTGTTATCATAAAGAAATCTACAAGAGAAAAAAGTCTGTGCAGACAAGTTTACAGTATTTGAAATGAATGGCTAGTTTTTAACTTTTCCAAAATGTAAATAACTTTGTTGAACATATTTCCATTTTCCAGCTATGGAGAGAGACAGTCTGGCTGGTCGGAACCTTGTCTGTTATTGGTGCAGAAGTCATTTAAAGGCACCTTTTGGCACAGGCCTCAGCGGGTCTGGCTCCTTGAGACTCACATAATTGTATTTATAACTCCATTAGTGACTGAATCCAGGCATCACTGGGCTCAGTTACACCGCTGTATGCGACTCGGAGGCTCATTTTGTGTCATGTCTGCAAACCCGTCGGTTGTTGACACCTTGTTAGAGGCATTGAAGTTTAGTTTCACAGTTCTTCATTTCCCCTCCCAGGGAGCAGGCAATCTACCAGACCCTCCCAGATCAGTGCTTTGCTGGGAAGTAGTGAATTCCAGAGTATTATTAACATGTCAGACTGGAAACCAGTTCAGTAGTTTTATTTCTTCCAAGACCCTTAATCAACCCTGTGATATAAACTTAGCATTTGAGAAGTTTTTGTAGTTGACAGCTGACCTGGAAATGTGAAGATATGCAAATGTCAGCAAGGTGTCTCTGTCTCTTAAGGTGCCCATGAGGTTCCTACCAATGAAGAGATTAGCGGGGCAAAGCCGCATCTAGTAGGTCAGACTGTCCTTACTGGAGCTTCTGGATTCATTACCTCTCCACCCCCAGCTCCTCTCTCAGTCATCCTGGTGATAAATAGTAACATAGAGGACCTTTTTCTTCTCGTCCTCCCTTCTCTGATATGATGGTTCACGTTAGCCAGAGCTCAAACTCATTCTTGCGTATTATGTCTCTAGAGTACTTGTTCATGAATATCTTCTTCATGCTATAATCTGGGAAAGACTGGTTTAATCTCAAGTTTTTATATAGAGTGGTAGCTAAAGCCATTATTTTACATTCCATCTCATATAACTTTCTATTTTTCAATATTTTCTTAAATATACTAAGAATCACCATTGTATCTCCTTTTCTGAAAGCTTATTCATAGACTTCTGTGGGCTGTTGTTTTTGTTTTTGTTTTAATGCTTTGTGTGAAATTCAGTAGCACTGGGTGAGCAAAATGCAAATGAGCCCAATTTCCCACAGCAATTTGGCCTTCTTCTCCATGGAGTAAGCAACCTTCTACCACCCTTAAGCTGTTTTGTAGGCTGTTTGCCTAAATTCTACCTGTGCAGACACCAAGGGGTTCTTCTGTCTTTGAAGCTGTTAAGAATGTCTTAAAAGAGAATGAGTACTTCTCCCCATATATAGTGTGAGCTGGCAGTGTTTTATAGTTAGTATATCAAGTAAGAAATCTAATGTTTTCAGGCATACATTCCCAGAGGTCTATCAACATCTTTGGCAAAATTATACATACTTTCTTTCCCTGTTCTCTTCTAAGACTTGCTTCCATTCTTGTCTCATGAAACAAATGTATTTTTGTTTATTCACCTGGGTCAGCTTTCTAGAATGAGAGGCTAGTCCCATGGACCACTGAGTATAAAGGAAGTTACCCTGCACTGCCCCATGACGTGGTTGATAGGTGTGTTTAGGAATGCAAAGCTTTCTGGGGTATCTTGGGATGGATTTTTGAATTCCAGGTTTCCATGACGTATATAAAATTGGGTACATAGCATACAAAGATTATACTGTCGTCCCCATAAGAGATTAAGAGCTTTATAATCTATACATCTTAGATAGATTTCAGCAAACTGTAAGTAGCTCATTTTACCCCCTTTGTTCTTGGCAACTTGTTCCTATCTATAATCTTATTCCTTCACATCTGACCACCAAGGCATGAAGTGTCAACCCACTCATATCGCCCCCTGCAAAATCCTCTAAAGATGTCCATTTCCTTTAGAAACAAATCCATGGGTAAGAGGGGAAAGTCTAGTGACCATTCTCTTAGCCCAGGGTGCCACACATGGGATTTTGGGCTAAGTCCATACCAAATATTAATTTTACAATTTTTTAATTTCTCAAGATGCAAATAATGTGATTATTATTAATAGGATGTAAAATCTTTGAAGAACATAAGCATTAAGAAAAAAGGACTTCTCTTTAAAGAAACAATCGAAGATATTCCTCAAAAGACAGAAACTTTTAAAATTAGAAATTGAATAATTTTTAAGATTCTTTGGAGAAAATATGTCATTGATTCATCATAGTCTTTTCCTTCTCATTGAGTTTTAATTTAGACTAGCATGGGAAGCAGAGTGCCCCTGGACTTTGATTTAGGGGATCGTGCTTTGGCCTGGAAAGTCAGTACTGGCCTGCATGCCCAGAACCCAAATGAAGTCAGTCAGTGTCCTAATGAGAATCAGGCCTAACAGAAATGTAAATTATTTCAAGACCTTTAGGGTTTAATTTTCTTAGCAACACCCTTGACCCTGTTTCCTAAAATTAATTTGATCCATGCAGTTATGTGTCTTCATTTGGTGTTATAAGATTGCAAGCAATGGGATGATGGAGAAAAATAGACAGTAGAAAAGGAAAATTTGAACAAGGCCAGGGTGTAATGTTTTGCTGATATAATGCATTGTTAGGGAGCTGGTGACTGTTGCCATGGTTGTATCATGGGCAGCCTTTCAACAGAAGCTCAGGGCATATGTATGAGGGCAGTGGGAGTGCCCAGTATCTCCTATTGGTCCATGCTTGACAGTGTGCTGGAAAAGCAGATACATACCAGTGGACTGGCCTGTGCTTGCTGAAATAACTGCATTGAATTTCAGATTAATTTCCATGGGATCAGTTATCCATGAACCTTCCTGTTTCCTCACTGCCTGTTTAAAATTCATTTTGGCATCAAGCTTCATTTCATTTTTCTCCTTTCAGTACTTCTGCATTGTGTCCCCTTCCTTCACATCCTACAGTGACATTTGCCTCGCTTTACTGTTTCTCCAGGACCCAGCTTTCTGTCCCTCTTTCCCCCACAGACACCTGAAGTGCCCCTGAGCCCTCACTTCATCGCCCCACACCCATGCTCCATCCCCCAGCCCTGTGGACAGGGAGCTCGGCTGTCACCAAGAGAGACACAGCCTTGTGACTGCTTCTTGTTAATGTCAGCACCACCTCATCACTTAAGCAAAGAGGGAAAAATCCATAAAAGAGATGGAAAATACAATTCTTTTTTTATTATTATTCTACTTTATTTTAAGAGGCTTGAGAAGAGGGGTGGTTCCAGTCCTTCTCAGTTTCCCAGAGTTTTACTTTACAACTGTCTAAGGAAGGACCATTCTTTTGATAAATGTATAAATCAGCCCAGGTCACCAGCTATGATGCATAAGACTCCAGTGTTGAATCTCTGTGCTGCTGGACAAAGTGACTAAATTCTGTGCAAATATTTTGAATCATAGGCTTTTTATTGCCCCTCAGTTCTTACTACTACTCATGATTCAAACATCTTCACGAAGCTGGGTCAGGATGTTGACAATTTGTGGTTATTTTCAGATCAACAGTAACTTACCCTCTTGAAAGCACTTAAAAAGAAAGTTAAGCGTATCTTAAATATTCAACCATTTGACCTGGAGAAAAGTTGGCTTTTCTGTTTAATTATTAGACCAATCTGTAGATGTAATCTTAAAGGGTTTTTTATGCAATAATGAAGACAGTTTGAGAAATGAGAAGGCACTTTAAAGACGTGAAACCTTGTATTATACACTCGTGGATATTTTTTAATAAGCTAATTGGATTCAGGTATTTTTTTCCCTTTAAATTTTTAAAAATATGTATTTCTAATTTTTTTGCATATTTAATTTTGTCAAAACTGAGAAATGCTCGCTAGTTGAACTTGTAAATGTTATTTGCAAACCAAATAAAGTATTTATTTTTAAAAAGAAAAGGTGAAGGAATCAATACGGATTTGTACATAATGAATATATGTGTGTGTGTGTGTGTGTATGTTTTTCCTTCCTGACACTACTTGGTCCT EMBV3_00555 CGTCTGGTCATCGTTGAGTATATGCCTCTGCTGGCTGGACAGTTTGGGCTGGAGTTCTTT Gene GeneID:100300220|LOC100300220:XM_002700322:32_cdna Constitutive 0 NULL GeneID:100300220 X GENE LOC100300220 NULL similar to alpha isoform of regulatory subunit A, protein phosphatase 2 EMBV3_25352 GCATGCTAAGTGTGAGCTTGGATGTTCCAGTGGCATGTTCCCATGTGTTAAGATATCCAC Gene GeneID:504220|SLC7A7:NM_001075151:65_cdna Constitutive 0 NULL GeneID:504220 10 GENE SLC7A7 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 EMBV3_14156 CTAACTGATGTCTACAATAAAATTCATATGGTAAACCAGATGTAGTGGTGAAAGAAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30742 CTCGCAAACGCAAGTTCTCCGAGGAAGAGCTGAAGCCACAACCCATGATTAAGAAAGCGC Gene GeneID:516069|HLF:XM_002695550:39_cdna Constitutive 0 NULL GeneID:516069 19 GENE HLF NULL hepatic leukemia factor EMBV3_28135 CTAGTACATACAGAGGGGCAGCTTCAAAATGAAGAAATTTTGGCACGTGATGGCCACGTC Gene GeneID:616194|C3H1ORF41:NM_001076412:112_cdna Constitutive 1 NULL GeneID:616194 3 GENE C3H1ORF41 NULL chromosome 1 open reading frame 41 ortholog EMBV3_24209 TGCGGGCGTCATGTCAGACAACGAGGACAAGAGGGCCAGGAGAACGTTGAGATTCTCCCT Variant GeneID:534232|POLR2F:NM_001037475:79_cdna 119^188 1 EMBV3_42766 GeneID:534232 5 GENE POLR2F MGC133639 RPB6 polymerase (RNA) II (DNA directed) polypeptide F EMBV3_22083 GCCAGCGATTACAAAGACAAATACAGCCACCTTATTGGCAAGGGGGCAGCCAAGGATGCA Gene GeneID:515086|SPAG7:NM_001038543:105_cdna Constitutive 0 NULL GeneID:515086 19 GENE SPAG7 MGC133785 sperm associated antigen 7 EMBV3_33680 CTCACTCGTCTTCCTTTTGCTCTCTCTGAAGCCAGTGGGCAGAAGCCACTGTCCCCACAA Gene GeneID:510280|COMMD9:NM_001038520:36_cdna Constitutive 0 NULL GeneID:510280 15 GENE COMMD9 MGC134317 COMM domain containing 9 EMBV3_04685 CTTGTACCTGTCTATCTGCCAGAGTCAGAGGTGGACCGAGGAGAACTTGGAGTTAATTAA Variant GeneID:505792|MVK:NM_001015528:57_cdna 448^603 2 EMBV3_07259 GeneID:505792 17 GENE MVK MGC129086 mevalonate kinase EMBV3_30849 CAAGGTGGCTGCCTTCTGCGACGTGGACGAGAACAAGATCAGAAAGGGTTTCTACTGCTA Gene GeneID:617397|B3GNTL1:XM_002696125:236_cdna Constitutive 0 NULL GeneID:617397 19 GENE B3GNTL1 NULL UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 EMBV3_28140 AAAACGTGGGTTTTTAGGCAGGAAATACGTAACCGGGAGTCTGAAGACCAGGGCCCACAT Gene BVT0102_114245 + 0 NULL GK000006.2:118865146-118947064 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206380 TCONS_00206381 TCONS_00206378 TCONS_00206379 1 XLOC_124909 Coding TCONS_00206381 XLOC_124909 Coding Coding AFAP1 6:118942973-119093365 = TSS153894 6505 1 TCONS_00206381_6 537 0.0594926979246733 17 0.956859120559076 8.77818438914754e-09 9.34141159874357e-09 0.000161281019886259 6.35819983491998e-09 1.21542339145022e-08 1.84721647886654e-14 3.77213020055736e-09 1.98507899899848e-06 2.58636501593127e-06 8.49490774888029e-05 4.14239505691876e-10 2.23282623268009e-05 9.3221872344859e-13 3.34368105446693e-09 3.23887470961308e-09 0.00150586672023864 0.000438878773788484 0.000243487001268898 5.7203444788085e-09 5.98004623616037e-09 5.70760083978858e-05 0.000403991269459896 4.38623551481815e-05 0.000246942184299016 5.42265792102861e-09 1.98899911929637e-06 3.50727353476487e-14 0.000174298372431541 3.10157485236568e-05 1.29362337846084e-08 NM_001206044.1 AFAP1 Bos taurus actin filament associated protein 1 (AFAP1), mRNA. 0.0 1.170e+04 99.91 0.999846272098386 NM_198595.2 AFAP1 Homo sapiens actin filament associated protein 1 (AFAP1), 0.0 2578 83.90 0.369869331283628 TCONS_00206381_6 sp|Q80YS6|AFAP1_MOUSE AFAP1_MOUSE Actin filament-associated protein 1; 0.0 967 87.20 0.998137802607076 1 coding 0 0 1 0 0.00490909215443314 0.972179217061173 -0.00356780828920746 0.946817002959177 GCTCGAGCCCGGTCGCAGCCTCTCGGCGGCCGCTGCTCCTGAGGAGCCGGAGCGCTAGCCCGAACCGGGACCGGCTGAGGCGGCTGCTAAGCGGCCCCGCCCCGGGGCTCCATTGTTGCGGCCGCGGCGGCGGCGGCTCTGCCGGCTTCTCGGCTCCGCCTGGCTCGGCCAGGGCGGCCTCCGTCTAGGAGCGATCGCTGCCCCAGCGGCGGCCTGAGCAATGGAAGAGTTAATAGTTGAACTTCGTCTCTTTCTTGAACTCCTGGACCACGAGTATCTCACCTCAACTGTCAGGGAGAAAAAGGCAGTCATCACAGACATCCTGCTGAGGATACAGTCGTCCAGAGGTTTTGAAGTGAAGGATCATGCCACGAAGCCGGAGACCCCTAGCAGCCTGCCGGCCCCTCCCCAGATGCCTTTGCCCGAGATCCCACAGCCGTGGCTGCCACCCGACAATGGGCCGCCACCGCTCCCAACGTCCTCTCTCCCGGAAGGCTACTACGAGGAGGCCGTGCCCCTGAGTCCCGGGAAAGCTCCGGAGTACATCACCTCAAATTATGACTCGGATGCGATGAGTAGCTCTTACGAATCCTACGATGAGGAGGAGGAGGATGGGAAGGGGAAGAAGACGCGGCACCAGTGGCCTTCGGAGGAAGCCTCCATGGACCTGGTGAAGGACGCCAAGATCTGTGCCTTCCTGCTGCGGAAGAAGCGCTTCGGGCAGTGGACCAAGCTACTCTGCGTCATCAAAGACACCAAGCTACTGTGCTACGAAAAGCTCGAAGGACCAGCAACCCCAGATGGAGCTGCCGCTGCAAGGCTGCAACATCACCTACATCCCGAAGGACAGCAAGAAGAAGAAGCACGAGCTGAAAATCACCCAGCAGGGCACAGACCCGCTCGTCCTCGCCGTCCAGAGCAAGGAGCAGGCCGAGCAGTGGCTGAAGGTGGTCAGAGAGATCTACAGCGGCTGCAGCGGGCCCGCCGAGCTGGAGTGCCCTCCCCCGCCGAGCTCGCCGGTGCACAAGGTGGAGCTGGAGAAGAAACTGTCTTCAGAGAGACCAAGTTCAGATGGTGAGGGTGTTGCAGAAAATGGAATTGCTATGTGTAATGGAAAAGAACAAGTTAAGAGGAAAAAAAGTTCCAAATCAGAGGCCAAGGGAACTGTGTCTAAAGTCACTGGGAAAAAAATCACCAAGATCATCGGTTTGGGAAAGAAAAAGCCGTCGACGGACGAGCAGACCTCCTCGGCAGAGGAAGACGTGCCGACATGTGGCTACCTGAACGTGCTTTCCAACAGCCGCTGGCGGGAGCGCTGGTGCCGAGTCAAGGACAACAAGCTCATCCTGCACAAGGACAGGGCCGACCTGAAGACGCACATCGCCTCCATCCCACTGCGCGGCTGCGAGGTCATCCCGGGCCTGGACTCCAAGCACCCCCTGACCTTCCGGCTGCTTCGCAACGGCCAGGAGGTGGCCGTGTTGGAGGCCTCCTCTTCTGAAGACATGGGCAGATGGATCGGGATTCTGCTGGCTGAGACGGGGTCCTCGACGGACCCCGGGGCCCTGCACTACGACTACATAGACGTGGAGGTGTCCGCGAGCGTCATTCAGACGGCCAAGCAGACCTTCTGCTTTATGAACCGGCGTGTTCTGTCCACTAACCCCTATGTGGGGAGCACCTCCAATGGCTACGCGCACCCCAGCGGGACGGCGCTTCACTATGATGACGTCCCCTGCATCAGCGGTTCGTCGAAGGGTAAGAAGCCCCCCGTGGCCTCCAATGGCGTCATGGGCAAAGGCAAGGCTCTGAGCGGGCAGCAGAAAAAGGCTGACTCGGCGGCTGGCGTGAAGCGGACGCCTTCGAATGCCGACCAGTACAAATATGGCAAGAACCGGGTGGAAGCAGATGCCAAGCGGCTGCAGGCCAAAGAAGAGGAGCTGCTGAGGAGGCGGGAGGGCCTGCGAGACAGGCTGGCCCAGCTGCGCAAGGAGAGGAAGGGGCTGAGGGCGGCCATCGAAGTGAACACCGGCAGGAAGACCCAGGTGGTCCTGGAAGAGAAGCTGAAGAAGCTGGAGGAGGAGTGTAAGCAGAAGGAGACAGAGCGCGTCAACCTGGAGCTGGAACTGACGGAGGTCAAGGAGAGCCTCAAGAAGGCCCTGGCTGGCGGCATCACCCTGGGGCTGGCCATCGAGCCCCGCTCAGGGACGTCCAGCCCACAGTCTCCGGTTTTCAGGCATCGGACTCTGGAGAACTCGCCCATGTCCAGCTGTGAGACCAGCGACGCAGAGGGCCCGCTGCCCGTGAACAGTGCAGCCGTCCTGAAGAAGAGCCGGCCGGCCCCTGGCAACTCGCCCTGCCGGGGCCACGTGCTGCGGAAGGCCAAGGAGTGGGAGCTGAAGAACGGGACATAGAGCCGGAGGACGCCCGGCTCTCGCAGCGTCGAGTGACCGCCCTGCGACTGCGCTCCGGTGCCAGGACCCAGGCCCACTGCACGTATCCTCTCTACTGTATAATGGTTCCCTTTAAAGAGATTTACTTGTAACGCTTTGGCTTCCAACTTCATTTGTGAAAAGATGGCAAGGGGCGGAAGGTGGGGAGCCTCCCCCTCCGGCAGATGAAGAAGCCACAGCTTCCCACCCAGGTAGATGACGGCTTCCACCCGTCCCCGCCCCTCCAGACCGAAGACCTGCAGGGACCTCGACGTGGACATGCTCTGCATGCTGGGCACAGCGTGGGCCTGCGGCTGCCCGCTGCTCAGCTAGGCGCCCCGGGGACACCCCCCCACCCTCCACCGCCCCCCGAGTCTCACCAGCGCCTCCCCCACACCTGGTAAAGTCACCACAGAGCTATGCTATGAAGCAGTTTCCATCTGTTTTTATGAACATTTTGTGAACGGATGATTTTGTCACCAGGACACTCTTCTTTAGGCCTTAAGGAAACGCCCTCTCTGTCCTGGGTTGCACCTAGCGCCCAGGGCTTGCCGGAGCTTCTGGGTCATGTTTTGTCCGTGGTCTGTCCCGCTTTGGAAGGGCGGCAGAGGCTTTCGGCGCTTCACGTTCTGTGTGTCCTTTCCTGCTTTTTCCAGCATCCACGCCCCCTCCGACTCCCTCAGAGCCAGCGGGTGGTCTCAGAGCCCTGGGCGGCCACGGGGTGACGGTCACACTCGTTCCCCAGGGGCCTGGCTGCCAGGCAGGGCCTCTTGCAGCATCCCTGTCTGCCTCCTGTGGGATGTTTCTAGAGCCTGAGACGTGACGGGGACAGGCCTGTCCACAGGGGGAGGTCATCTGGGTCTGAGGACCAGGCCAGCCCTCCCGTCTGCAGAGGGACCTCTCAGGAATACTCCTTGTGGGAAGCATGGCCACTGCCCAGGACAGCCATCAGTCACCCCGGAGCCCCCTGCACGCCGACTGAAGGACCAGTCACACGCGTGCACGGGCTCTCTGCCCCCCGCCACCGGAGCGGGCCTGGTGTCCGCTGCCCCGCGGGTGTGTGTTGTCAGATACAGGAGCGGGAAGCGAGCAGTCAGCGTCCTGTGACCACGTCCTGGTGCTCACGTTTTCTGCAGGCCACACAGTCAAGGTTGCTGTCGTCAGCAGGGTCAGAGTGGCCCCCGAGGCTGGCACGGGCCCTGGCTGGCTTTACCGACCACAGCAGGGCAGTGGTCTTGGTGCCTAGGAATTTCGCAGCAGAACCGGAAGCTGTTTACCTGGACCATGTGAAGTCACTCAGTCATGTTTGACTCTTTGCAATCCCATGGACTGTAACCTACCAGGCTCCTCTGTCCATGGGATTTTACAGGCAAGAGTACAGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATCGAACCCAGGTCTCTCGCCTTGCAGGCAGACTCTTTACCATCTGAGCCACCGGGGAAGCCTGTTTCCCCGGAGCCCACCTGAAAAGCCTGGATTTCAGCAAAGCCGGCTGTCTGGTCTGCGAGCTGCGGCCTGGCGCCCGACGCTCAGGTTCATCCTCCGTAGTTGGTACAGCAGGTGAGGGCGCGTCTCACCTGCACCCGTGACCCCGACCCCCGGAAAGCCAGCTGGGAAGTGAGGAGCCCATCTCCCCAGTGCCGCTCCCCCTGCTCTCCCGTCCACGCAGGAGGCTGGAGCACATGGCATCATATGAAGCGGAGTTTCCATAAACTGTGAGCCGCTGTGGATTCTCACTGCCTTGTGGTCAAATGAACATTCTCCGTCGTGGCTCTCCGACTCCTCTGATTAGTAGCCAACTTTGTCCAAGACGGTGGTCAGGCTTCAACTGTTACTGAGAAGGGAAAAGGTGATCTTATCCTGGTGCAGGTGGGCAGAGTCGACCAGCGCTGGGCTGGCTGGCAGCGGTCGCCGCGACCACCTCTGTGGGTCGCACCTGAGGACAGCGGTTGGCACCGGAGGCAGGATGTGGGCCCTGGTCTTCAGACTCCCGGTTACGTATTTCCTGCCTAAAAACCCACGTTTTTAAATTCACTTTCACAACCATAAGCCTTTTAAAGAGAACGGAGGATTCAGCCCTGTCTTGTTCCCCGAAGCCACGTAAAACGGGCCCTGTGGGGGTCAAGGCCGCCGGCGTCGGGCTGTGTGATGTCGTGTGTTTCCCTCGACATCTTAGATTTGATCAGAAAGTTAAGGCATTTGCTTCAAAATAAGTTATTTATTTGTATATGTTCAGTAAGTATAGGTTTTAATTTATATCTGTACATATTAGACACACTGTGGACATCCTGTCAGAATCCTGGCAGCGACAGCCATCTCCGTAGCCCACCCGAAACATGGCCCAGGGGGCTGCCCCCTCACCCCGGGGGAGACCAGGAGGAAGTGGTGACCAAGCCAGCCTCAGGGGAGAGGCAGCCGGCCTGGACCCTTGCTCCGGGATGCAGGCCCCCATCCCCTGGGAGAAGCGGATCCTTGGGCCATGTCCCCATCCCTCCAACAGACGGTCGTGGTCACAGAGTGCTCGCCAAATAGGATCCTGACCAAAATGAGATGAACGTGGTGGCTGGACCAGAGCCCTGGCGTGAGACGGTCCCCTCCCCAGGGTCTCGAGGTCCTTCCCTTAGGACATGGTGACCGTCAGCCTCTCAGGCTTCTGTTCCTGGCTCTGTTTTGGCAAGGGTTCATCAACCTTGAAAATCCCCTCATTTTCACGTTTTTATGAAGTGAAGTGAAAGTCGCTCAGTTGTGTCCGACTCTTTGCGACCCCATGGACTGTATAGTCCATGGGATTCTCCAGGCCAGAATACTGGAGTCAGGTAGCCTCTCCCTTCTCCAGGGGATCTTCTCAACCCAGGGATGGAACCCAGGTCTCCTGCATTGCAGGCAGATTCTTTACCAGCTGAGCCACCAGGGAAGCCCAAGGATACTGGGGTGGGCAGCCTATACTACATTTTTATAGTGTTTTCATTCATTCACCAACCTTTTGCACAGACATAGAGGGCATGCCACGTCACCCTCGACGTGGGCTCAGGAGGTGGAGAGGACCGCTCCTCCCAGGCCACCAAGGGTTGAGCAGGGCCAGTCTGTGGGTCTGAGGAGCCAGCAGCGCCCCTGCCTCCCAACAGCCGTCTGTGGAGCCTGGCGGGCCGGGGCACCCGCACACGCATCTCCCCAGGCTCCTCTCCCGGGACCGTGGGGAACCAGTCGTGGCCCCTCGGTTCGCACACGCATCTCCCCAGGATCTTCTCCCGGGGACCGTGGGGAACCAGTCGTGGCCCCTCGGTCGCACACGCATCTCCCCAGGCTCTTCTCCCGGGACCGTGGGGAACCAGTCGTGGCCCCTCGGTTCGCACACGCATCTCCCCAGGCTCCTCTCCCGGGGACCGTGGGGAGCCAGTCGTGGCCCCTCGGTTCGCACACCTTGGCTTGTCCAGCTGGACCGTCCCCTGGCCCATCTCCCTGGTCCCTAAGCTAGTTTGGGTGTTCTCGTGAAAACCCAGGATGACCCTGATGGGCTGGAGACATGCCAACTTGGAAAAATCTGTCACAGAAAGTGAAAGGCGTGTGTCCTGGCCCTGGAGACCGGCCCCCCAGCGAGGGGTTTCAGGCTCCTGTTCACTGAGACAGACTGCTGGGCCTGTGTTTCCCAGGGGAGGGCGCAGGGCCGAAGCTGGGCTGGGCCTGAGGGTTGTGGGCAGGATGCTGTTGTCTGCGGCCCCAGCCTTTCTTGCCCAAAGAGTAAGTGTCAGCACCCTGTTTGGAAGGAAATGTAAAGTTTGCCCACGGGCAGCCTTCACCAGCATCTGTCCTGGGACTGGAGCCTTCGCGGCCTGGCCCAGGGACAGGCACTCGGGCAGGGCCTCCCCGACATGTCTGTGTTCCAGCCCGGCCGCTCCGCCCAGCGACACCTCCTCTAGGAGCCAGAAGGACGCCCAGGTGTCTCCACCTCCGCTCAGCAACACTTCAGTATTAAACTATTGCCTTCCTCTTCCCACCCCCCCCCCCCAATTAAGGTTTTTTAATGGAAGA EMBV3_32416 TACATCACGCACGAGAGTGACGATGCGCGCTGGGATCAGTTTGTGGCAGAGCACCCACTA Gene GeneID:782793|PRKD2:XM_002695103:565_cdna Constitutive 0 NULL GeneID:782793 18 GENE PRKD2 NULL protein kinase D2 EMBV3_11639 GGCATATGTAGCAGCCAAGGTTGAGAGAGGAAAAGCAATTGGCTGAGATCATCTAGTTTG Gene BVV0102_391593 - 1 EMBV3_10845 GK000006.2:91480130-91597121 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36445 GATAATCTGAAAAGCAAGCTGGATAAAATGTGATAAGAAATTTAAATCCTCCTTCATCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40685 GACTTAGAGGCGATGTTTACATGCATTTTTTTCTTGTTTTTGTTTTTTAAGTGCAGGGAG Gene GeneID:541284|MBOAT1:XM_002697548:326_cdna Constitutive 1 NULL GeneID:541284 23 GENE MBOAT1 NULL membrane bound O-acyltransferase domain containing 1 EMBV3_09794 AGATGAAAGAAAAGTGGAGACTTCCCTGACAGTCCAGTGGTTAAGACTCTGCGCCTCCAC Gene GeneID:538805|LOC538805:NM_001099093:109_cdna Constitutive 0 NULL GeneID:538805 24 GENE LOC538805 MGC160116 hypothetical protein LOC538805 EMBV3_28296 ATGTCTGGACGTGGTAAACAAGGAGGCAGAACTCGAGCTAAAGCCAAAACTCGGTCTTCC Gene GeneID:618143|LOC618143:XR_084053:256_cdna Constitutive 0 NULL GeneID:618143 23 PSEUDO LOC618143 NULL similar to histone cluster 1, H2ad EMBV3_35409 TATGGCCGGCGCCGTGGACCGCCCCGCAATGCCGGTGAGATTGGTGAGATGAAGGATGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23886 GCTAGCCTACTTTGAACGTTAGCCCATCCAAAGCTACATAAACCAGTCCCATTACTGTGC Gene GeneID:787444|NKAIN2:NM_001102345:21_cdna Constitutive 1 NULL GeneID:787444 9 GENE NKAIN2 MGC140156 Na+/K+ transporting ATPase interacting 2 EMBV3_08239 CCTCAGGGCCTCCCCTGGCCCACGGAGCAGGGCCTCCCCCCAGACAGGGGGGGCTTGCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18593 GGGCATCTGCTAGTTCATTGTGTAACTTAGAGATGGCATTGTATTGGGCAAAATTTGGAC Gene GeneID:613640|AP4E1:XM_002690927:238_cdna Constitutive 0 NULL GeneID:613640 10 GENE AP4E1 NULL adaptor-related protein complex 4, epsilon 1 subunit EMBV3_31465 CCATTGGGACTCCAGATAACAGGGATAGGAGAACTGCAGACCGGTGGAAAACTGATAAGC Gene GeneID:537131|SMG7:XM_002694209:55_cdna UTR3_Alt 3 NULL GeneID:537131 16 GENE SMG7 NULL Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) EMBV3_43614 CCAACCCCCACCCTCTCCTCCACCCCGTCCACCTTTCCCAGTTTTAGTTTCATGCAATAA Gene GeneID:530184|SSBP3:NM_001104986:76_cdna Constitutive 2 NULL GeneID:530184 3 GENE SSBP3 MGC166241 single stranded DNA binding protein 3 EMBV3_38206 GACAGCTCTCTCTATTATCTGTAGGTCTTTCTTCCATGGCGAGGAGCAGGAAGGGGTACT Gene BVT0102_043537 + 0 NULL GK000017.2:58609146-59094335 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077625 TCONS_00077622 TCONS_00077623 1 XLOC_047105 Coding TCONS_00077623 XLOC_047105 Coding Coding SUDS3 17:59091065-59132156 j TSS57959 4159 1 TCONS_00077623_1 327 13 0.899099537600389 0.000760055615331778 0.000722840601744423 0.000951970582173139 6.35894537890585e-09 0.0017283497294435 4.05947407322645e-07 0.000562152994741456 0.00139874151252003 0.0013476001703433 0.000369329928124499 7.75726180423276e-05 4.93540019315574e-07 0.000173269517036869 9.51501217051709e-06 0.000149419232779296 0.00662313821272765 0.000426878390766681 0.00315952984494618 0.00209776608312384 0.00266120860346943 2.19353551106223e-09 0.00196829427532828 0.00154508416042053 0.00339982011906429 0.00258092264325608 0.00105383828342337 0.00129397568136136 0.000626579884012101 0.00054527265629167 0.00131123606908971 NM_001098891.1 SUDS3 Bos taurus suppressor of defective silencing 3 homolog (S. cerevisiae) (SUDS3), mRNA. 0.0 1995 100.00 0.26568886751623 NM_022491.2 SUDS3 Homo sapiens suppressor of defective silencing 3 homolog (S. cerevisiae) (SUDS3), mRNA. 0.0 1503 90.07 0.266169752344314 TCONS_00077623_1 sp|A6H6W9|SDS3_BOVIN SDS3_BOVIN Sin3 histone deacetylase corepressor complex component SDS3; 0.0 657 100.00 0.987767584097859 1 coding 0 0 0 0 -0.177086852583857 0.377532266372136 0.0110796936936285 0.813156761605533 ACGGGGACGGGGTCGCCGGCGCTCCGGCTCTTGGAGTCGGCGGCTCCCTCAGGCGCTGCGACGCGGACGTAGAGCCTGGAGGGCGGGTGGCTGTGGTTCCCGGGGGGCACGCTCAGCTTCGGGCGGAGGCGACATGAGTGCTGCGGCGCTTTTGGCGCCTGCTCCGGCCCCGGCTGGAGCGCCGCCGGCCCCGGAGTACTACCCAGAGGAGGACGAAGAACTGGAGAGCGCCGAGGATGACGAGCGCAGCTGCCGTGGCCGCGAGTCGGACGAAGACACTGAGGATGCTAGTGAAACTGACCTGGCAAAGCATGACGAAGAAGACTTTGTAGAAATGAAGGAACAGATGTATCAGGATAAACTGGCTTCTCTCAAGAGACAGTTGCAACAACTGCAGGAAGGTACATTACAAGAATATCAGAAGAGGATGAAGAAATTAGATCAGCAGTACAAAGAGAGGATACGAAATGCAGAGCTCTTCCTCCAGCTGGAAACTGAACAAGTGGAAAGAAATTACATCAAAGAAAAGAAGGCGGCAGTGAAAGAATTTGAAGACAAGAAGGTTGAGTTGAAAGAGAACTTAATTGCTGAGCTAGAGGAAAAGAAGAAAATGATTGAAAATGAAAAGCTAACGATGGAACTGACTGGAGATTCCATGGAAGTGAAACCCATCATGACCAGAAAGTTGCGGAGGCGACCGAATGATCCTGTCCCCATCCCAGACAAGAGGAGGAAACCTGCTCCTGCCCAGCTGAACTATTTGTTAACAGATGAGCAGATCATGGAGGATCTGAGAACGTTAAATAAGCTGAAGTCACCCAAGAGACCAGCATCCCCATCCTCTCCCGAACACTTGCCCACCACCCCTGCAGAGTCTCCAGCGCAGAGATTTGAAGCTCGGATAGAAGACGGCAAACTGTACTACGATAAAAGATGGTACCATAAGAGCCAAGCCATCTATCTGGAATCGAAGGACAACCAGAAACTGAGCTGTGTGATCAGCTCCGTTGGAGCCAATGAAATCTGGGTGAGGAAGACAAGCGACAGCACCAAGATGAGGATTTACTTGGGCCAGCTTCAGCGTGGGCTCTTTGTGATCCGCCGGAGCCTCCTCTGAAGAGACAGCTCTCTCTATTATCTGTAGGTCTTTCTTCCATGGCGAGGAGCAGGAAGGGGTACCCTCTGCAATGCGTTTTCACCTTTTGAATCCAATCAGTGGATCACATAGGTCCCTTCCTTGTCGAGCGCAGTTCGCTGCTTCCCCAGAAGCTTGGGGCAGAGGTCCTAGCAGAAGAAGAGTCATTCTCCGGACTCTAAGCCTTCTTGGAGAAACGAATGTCTTGTGTTACGTCTGGTGTGTTCCATCCATTCCACCGGCTGAAAGACAGAAAAGTTTGCATGAGAGACAACGTGCACTGCAGTAAACAGAGCTGGGGCAGGGAGAGTGTTTCATATTCATAAAGTGCTGAAGGTACTGATTTCAAATGTTGTTTAGACAAGTGGTTTGTTCACACAGATTTATTCTAGCTCAGTCTGGAACACGAAGTGATCATTTCAGAAATGTTAGTGTGTAGTTCACTGCTGTCTCCTGCTCCCAAGTAGATGAGGTGGTCCCTGCTGCCAGCTGATGATCTGGGTTGTCTGTGGTCTGTGGGGAAGTGAGGTGGATGGTGGAGTCATCAGTGATCTGTACACTTTAACTCAGATCGCACTCTTGTTGCTGATGCCTGTGTTTCACCTTGGCCCTTCCAAACCCATGAAACCTTGTCAGCTCCCAGGAGCTCTGGCCCAGGTTGGAGACAAAGAAGGCTATGACCACCATTAAACCCACTGTCTCCCTAAATGAATCCGGATGAAACAGCCTGCCCTGCTCACGTTCCTTCGCTCTCCAGATTGGACAGATGACTTACTGGCTGATTGTTTGCTTTAATATTCTTGTTGCCATCTTAAGATGTTAAAGTATTTGGGTCAAGTGTTAGCATCTCTGAGCAATCAGTAGACGTTATGTGTCCTAGGAAACCTTTGTAAGCAATTCCCTTGGTCTCAAGTGATTGTCTTCGTATTATCTCTTGATACACATGTCCCAAAGTAGGTTGTGGAGCTACTTGTGAGCACAAGTAGATTATCTTCTCCAGAGTCCTGGCTTCAACAGAGACCAAACCTTAGTGACCCAGAGTAAAGGCTTGTACAGGTACATTTGAGTTTTAATTTATAATCCAGTTTTTCTCTCATTTTCTTCTGGTGTTGGAATCTCATTTAGAAAACAGGATAAATGACGTCATTTATCAGAAGTTGCCCGGGCGTTCTGAGTTTCTTTACTGCCTTCCAGCCTCCCACGGTGATGATTTTTACAATAGTGAACCGGATCTGCACTAAACAGGGCCTTCACCTTTTATTTTTTCTTGGCAGCCTTTGCTGTAAGGGCAGCCCTCTCTTGGCTGAATTTTCGCTGTGGTGTGTGTCACCTCCCATAATATCAGGGAGCTCTTTGTTATCCCCTTGCACACTGTGCTGGAAATTTATTTAGATGTATTTTGTGTGTGTTGCCATCAAAGATGGTTTAAAAAAAATTTTTTTTTTTTTTTAATGATTGTCTTATCTTCCTACCACTGCTCTAGAGTTTCTTTGGGGGAGTGGTGGTGGTAAGAATTGTATTGATAACAACTTTTCAGCATTGAAGCAGCAGCAACTCGCCTTGTTTTCTGGCCTTGCCTGGTGGTTCCTTTGTGCTTTCATGAAAAGAATAGTGATTTGAAGACCAGGCACTTTAGCCTTTTCTCTTCTGTAAATTTGGAGAATGTTTGAGGCCACGCTTCAGCGTGGACTCTGCCACACCACTACCTTCTCAGTATCCTCACAGCCCTTCACAGTCATGATGTGGTGAGAATGGGGGAGACCATGTGGTCCACTTGAGATATGGCACAGTAAATTATATTCCTGATCCTGGTATATTTGCTTTTTATTGAGTCACTCCAGAGGTGAAGAGTCAGCAGTTCTGCCCCTCAGTTAGACCCCTGTGGTTGGTGACCAGGGAGGGAAGAGCCCCCTTGTTAGGAGATAGAGGTGCTTTTATGATGGGCCAAGTCAAACAAGACAAGGAAAAAACAGATTCTGAGCTTCCTAGAATAAGAGGGGCCTGGCTTTAACCCAGGTGGTTATTGTTCTTCCAAAAGGCCTTTATCTCGTCAGGGCATGAGATAAATTCCCAGATTCAAACTATTTCCTGAAAGTGGTACTTGGATAAAGTTTGGTCCAGACAATTCCAATCAATAACCTATACATATGTTAATCTGATCAAGAACCTGTATGTATGTTATTCAAGAAGCTGTATGTGTGTGATCCTGATCAAGAACCTGTCCACGTGTTTCGTTCGAGGCATCAGCCTCAAGTGTTGCCCGCAGTGTTTGCTGCGGGTGTGCCCTAATATTTATTTTACCTCCACCTAGGAGTTGTGTCTCCCTCTCTAAGCCGGTGTCCTCTTGAACAGTTTCCAGATTTCTGTAGCCATACCAAAGCCAGGATATTTTCCTTGATTTGGATACCAGTATTTATAGAAGTCTAACTAACTACCTAACTTTAAGTTTTTTTTTTTAAAGAAATTCTAACTGGGGCCAGTAGAAGATCCCAGAAGCTGATCTGCAAATCAAGCTACTTGTATTGGTGTGTGAGACCCTATGTTTAGGATTGGGTGACTTTTCTAAGAGAAATACAGGGGGTGGGATGGAATGGGTTTGGTTGCAATGTTGTTTTTTTTTTTTTTTTTTTTTTAACCTAACTTGACTGGCTGGGGGGAGGGGAGGGGGATCCTATTTTTTACAATATTTTTGTTTTTTATTTTCTATTACCATTTCCTTTTACCCTTGAATTTCTACTAAAATTCCTCCTGATAAAAAAATCTTGTTTCTAATCTGGGAATTTGAAATCTCGGTACTTAATGTTACACCGTTTTTTCCAAAGAGTTTAAAACACTTTAGTACCAGAACATGGCAAAAAATAATAACAACATACAGCCATTTCAAGCAGTTGGTGGGCTTTTTTTTTTTTATACAATAACATCATTAACTGGTACATTAAATGTTCTGAGAGGTGAATGTAACAAGTAGAGGGTTTTATTTTTTTTCTTTAAATGACAATAAACTTTCAAAGAGAAAACCAGCAT EMBV3_36222 GAGGATATGGCTGCCCTGGAGAAGGATTACGAGGAAGTGGGCATCGACTCCTATGAGGAT Gene GeneID:777775|TUBA4A:NM_001078158:136_cdna Constitutive 0 NULL GeneID:777775 2 GENE TUBA4A MGC139408 tubulin, alpha 4a EMBV3_21599 GTTTTTGTTAAACGCCTAAGCACCGTTTGGCTCTGTGGCAGGATGGTATCTCGGAAACGC Gene GeneID:513753|EDN3:NM_001101979:1033_cdna Constitutive 2 NULL GeneID:513753 13 GENE EDN3 MGC143242 endothelin 3 EMBV3_31792 CTTGGAGGAGCTGACACCGGCTGTTGCGTGGGTCCTGGACACTCACCTCTGGAGCACTGA Gene BVV0102_420026 + 0 NULL GK000005.2:111200491-111261436 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193416 1 XLOC_117473 NonCoding TCONS_00193416 XLOC_117473 NonCoding NonCoding - 5:111212984-111217875 - TSS144555 593 2 TCONS_00193416_1 88 0.6070826306914 3 0.879345603271984 0 0 0 0 0 0 0 0 0 0 2.39471896030128e-09 0.000198951715717182 0 0 0 2.55879887772758e-08 1.54380548675595e-08 1.93647495366312e-08 0 0 0 0.00018743669803056 6.1882181196519e-05 0.00115910557543782 0 0 0 0.000277001744113643 5.26466745393002e-09 1.21529912133382e-09 XM_005198506.1 LOC101906018 PREDICTED: Bos taurus uncharacterized LOC101906018 (LOC101906018), 0.0 812 100.00 0.75716694772344 NM_001531.2 MR1 Homo sapiens major histocompatibility complex, class I-related (MR1), transcript variant 1, mRNA. 1e-09 68.0 79.75 0.129848229342327 0 noncoding 0 0 0 0 0.0227413108320659 0.843229640995267 0.0403346903977425 0.40105181827313 GGAGGGCAGAGAGACCAGAGAGGATGTTGGAGCTGTAGCATCTCGGCATAATAAAAACCATTTGCTAGAGGACATCTTCGAGATTCACCTGCTTCAGTCTTCGTGGGTCTCTGAGGCCCAGAGAGGGTATCTGCCTTGCCCAAGGATGCCGCATAAGGTGTGTGATGTGATCACGCCTGCCTTGGAGGAGCTGACACCGGCTGTTGCGTGGGTCCTGGACACTCACCTCTGGAGCACTGAGCCACCACCATGCTGGGAGGAAGCCCAACCAGCCCACATAGACCAAGTAGAAGAGCCCAGAGAGAACAGGAGGAGGAGAGAGATGCCCAGCCAGCCGACTGCAGCCACTGGTTGCAGCTGCATGAGGGACCCCAAGCCAGACCATCTAGCCAAGCCCATTCCAAATTCATGACCCATAGAAACTATGAAAAACAGTAAGATGATTCTTGTTGTTTTAAGCCGCTTAAAGTGTGGGGTTGGTTGGTTATGTGGCTAATTAAAACACAGCCCTCATGTTGATGGATGGCAGAAATGGAACCAATTTTGTAAAGCAATTATCCTTCAATTAAAAAAAAATAAACACAACCCATTGT TCONS_00196470 r 5' 12495 TCONS_00196470 r 5' 12495 EMBV3_11488 TCACTCTGTACGACTGTCACGGCATGAAGGGGAACCAGCTCTGGGGCCATAGGAAGGACA Gene GeneID:100336914|LOC100336914:XM_002689454:47_cdna Constitutive 0 NULL GeneID:100336914 8 GENE LOC100336914 NULL polypeptide N-acetylgalactosaminyltransferase-like 6-like EMBV3_03485 TATTAGAGAATCTGGATAAATTTTCATAAGATATTCAATTTCCCCTGCAGGTTAGCAGAG Gene GeneID:539867|SYT4:NM_001098108:112_cdna Constitutive 2 NULL GeneID:539867 24 GENE SYT4 MGC142968 synaptotagmin IV EMBV3_41358 GATGTGATCTACTGGTTCCGACAGATCATTGAAAGAAGGGTTCATGACGTCGTTTGCCTT Variant GeneID:512377|RIP5:NM_001034421:1003_cdna 336^490 1 EMBV3_18424 GeneID:512377 13 GENE RIP5 MGC127054 RAB5-interacting protein EMBV3_38376 GTGAACCTTTGCCTGGTCGTCGCTGAGATTCCCCCTTTTGTGACGTATTTGTGCAAGAGA Gene BVT0102_115275 - 1 EMBV3_13426 GK000018.2:62541238-62547218 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084706 TCONS_00084707 1 XLOC_051674 Coding TCONS_00084707 XLOC_051674 Coding Coding UBE2S 18:62537795-62543809 j TSS63421 3462 1 TCONS_00084707_2 162 0.223859041016753 4 0.424912689173457 5.84963109727097e-05 7.92467871696446e-06 0.000151646375002656 5.38988157111222e-06 5.84070730196419e-05 1.39249012037853e-06 7.71147208549633e-05 3.53269393136724e-05 0.000105853105061552 5.8561173885684e-05 2.72606552264021e-06 9.97848631800714e-05 4.77195636112458e-05 0.000267316902651184 0.000270202658259185 0.000136723005677859 0.000355761289604775 7.74852369981056e-05 2.54590187768511e-05 0.000172970505803377 5.55109060437599e-10 7.23445227121082e-05 0.00020827965851778 0.000184756373735414 5.26743679837398e-05 6.58916661076599e-07 2.88731576712787e-12 7.71592165082769e-06 1.90109858302685e-06 4.7723351221558e-05 XM_005219708.1 UBE2S PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2S (UBE2S), 0.0 1465 100.00 0.234257654534951 NM_014501.2 UBE2S Homo sapiens ubiquitin-conjugating enzyme E2S (UBE2S), mRNA. 0.0 1021 87.32 0.232235701906412 TCONS_00084707_2 sp|Q1RML1|UBE2S_BOVIN UBE2S_BOVIN Ubiquitin-conjugating enzyme E2 S; 7e-113 324 100.00 0.993827160493827 1 coding 1 1 1 1 -0.0138735351016668 0.979580886418041 -0.0022217753375747 0.967507886095274 CCGGCCTTTTGGGCAGGCCTGTGGGTCTTCCGGGAACAACAACACTCTGCGGCCGTCTCCAGGACCGATCTGGGGTTTCCAGGAACTCCAACGTGGAGAACCTGCCCCCCCACATCATCCGCCTGGTGTACAAGGAGGTGACGACGCTGACCGCTGACCCACCTGATGGCATCAAGGTCTTTCCCAACGAGGAAGACCTTACCGACCTGCAGGTCACCATTGAGGGCCCTGAGGGGACCCCGTATGCCGGAGGCCTCTTCCGCATGAAACTCCTGCTGGGGAAGGACTTTCCGGCCTCCCCACCCAAGGGCTACTTCCTGACGAAGATCTTCCACCCGAATGTGGGCGCCAATGGCGAGATCTGCGTCAATGTGCTCAAGAGGGACTGGACCGCTGAGCTGGGCATCCGGCACGTGCTTCTGACCATCAAGTGCCTGCTGATCCACCCCAACCCCGAGTCGGCCCTCAACGAGGAGGCGGGCCGCCTGCTGCTGGAGAACTACGAGGAGTACGCAGCCCGCGCGCGCCTGCTCACTGAGATCCACGGCGGCGCCGGCGGGCCCAGCGGTGGGAGGCCCGAGCCCGGCCGGGCCACTGCCAGTGGGGCGGCGGCCTCCACTGCTGACCCCACAGCCCCTGGGGGCCCAGCAGGGGCTGAGGGGCCCATGGCCAAGAAGCACGCGGGCGAGCGCGACAAGAAGCTGGCAGCCAAGAAAAAGACGGACAAGAAGCGGGCACTGCGGCGCCTGTAGTGGGCTCTCTCCCCTCCCTTCTTACCTGACCCGACTCTGTCTCTAAGTTATTTAAATTATGGCTGGGGTGGGGGAGGGCACGAGGGCACTGGGACCTGGATTTGTTTTTCTAAATAAAGTTGGAAAAGCAGCTCTGCACCTCCACCGCCTGGGCTGTGAGCAGCGGCACCCTGGCCCGTCTTGGGTGCAGTGGTCGGTGGGGCCTGGTCCCGATCACTCCTGACCTCGTCTTGAAACAGGCACAGCGGACTGGTGGGGTCTGGCCAGGCGGCAGGTGCGGGCCCCATGTGTCTGCCCTGCCCTGGGTTCTTGGTCCAGCTCTGGCTGCAGAGTGTGCTCCCGGGGGCCTCTGACTCTCTTGCCAGGCCTCATGACACTGGTCTCGTGGTGGGCGGGTCGCTGCTCAGGTCTCAAGTGAAGCTGACTAGGCCCGCTCCTTTCTCCAGGGTTGTGGGCCTGGGGCTGTCCTCAGCTGCAATCTGCCAGGGTCCTCACCCCACGCTCCCCTTTTGTGGCTGACCTGGCCCTTTGGCAGGGCCTAGTTGATTAGATGCAGCTGTTTGATAAGCCCTGGGGGAGAACTTGACTGCAGGAGCTTGTCCGGGTGGGAAGGGGGGTGGGTCTGGGGCATGGCCCTCTTCCCCGCCCAGTTTCCTCATCTGCAGGAGGGCAGAGTGGCAGTCACTGCACCCGTGGGTGGCTGTGGAGGACCAGGGCGAGGCCGCAAAGCCTGGAGAAGTGTGAAGGGACAGCAGGGAGCTGACTTGAGTACACAAAACGCTGAGTAAAGCCACATACAAGTACAAAATATTTGGTTCCACTTCCGTGAAATTCTAGACGGCAGCCAAAAGCAGATCCCTGGCTGGCTGGGATCAGGGAGGATCAAGGACACGGAACCTTGGTGATGAGCACGTTCCAGATCGGTTACGGTGGGGCTCACGTGGCTGCATAATTATGTGAACATGTGTATATTTAAATTTGGTGTATTGTACTCTGTAAAGTACATCTCAGAATTTCATGTAATTTAAAACAAGGAATTCTGTTCAGTGGGAAAGATGATAGTTAACAAGACATACAACGGAAAGGACAAATCTAAATTTGTGAAGAGCCCCTACAGGTCAGTAAAAATGTGAAAGCAAAATCTCTTGCACAAATACGTCACAAAAGGGGGAATCTCAGCGACGACCAGGCAAAGGTTCACACCATCACAAGTGATGGGAACCCCGAGCTGACCCCGCTAGACCTGGCAGTGCCAAGTGCAGAGCCAGGGATGCTCTGCCAGTCCACGGTGCAGGAGCGGGAAACAAGTCACGTGGAGACACGGGGAAAGGCCGGAAGCACGAGTATGTCATTACTCAGCACTCTTGCACACACACCACGAGCTGCAAAGCCACGTTTGTCCCAGGTTGCAAGCAGTATAAACACCTGGATACAGTTGAGGAGCAACAAGAGCAGTGGGCCGTCACTCAGCAGCGTGGAAAAGCTTGCCATCAGCCAAACAAGCAAGGTTCAGTAGATCCACAGTCCTAACGCCATCGCATGCAGTTCCAGAACCATCAAAACCAAGCTCTGCTGCTAAACACACATACCACGGTGGTCACGCTGTGTTTGAGAGCAAGAAAATTGTTTCCCTAAGGCTCAGGATACTGGTTACCCCTAAGCAGCAAGGAGCCCAGGAGCAAAACATAAATGTGTCAATGTGTGCTTTTCTGTGCATCTGCTGTATTTCAGGATTTTAAGGACATGGAGGGAGGGAGGTGGAAGCAGGGTTCTGGATGGGGAACACGTGCGCCCATGGCTGATTCATGTCGATGTATGGCAAAAACCACTACATATTGTAACTAGCCTCCAATTTAATTTTTAAAAAGACAAACACACCAAAAGACATGAAGGAGCACATTATGAGAGATGGACCAATCTCCAAAACATATTACGTAAGAAAGAGCAACATGCCAACACTGTATAAAATATGCTACCGTTTCTCTTTTCAAATTTAACCAGAAGGTGACATTAGCCTGCAAACACTGTCCCAAGAAAGAAGAGCCTGGAATACCATGTGCATGGTACCCATTCAAAATGCAACGTCTTGACTTTTAAAAAATTTTAAAGATAATGAAGTTTCACTAGAATGGCTCCCTCAAACTCCCATCTCCCCAACACCCAACTCCCTAATCAGGGACAACCAGTGTCAATGGGTTCTCTTGTATTTTTCTGAGGAAATTCTATGGGAATGCAAGCAAATTTAAGCATGTTGTTTAGTCACTAATTCATGTCCAACTCTGTGACGCCATGGACTGTAGCCCACCAGACTCTTCTGTCCATGGGATTTTCCAGGCAAGAATACCGGAGTGGGTTGCCATTTCTCCAGGGATCTTCCTAACCCAGGAATCGAAACCGCATTTCCTGCATTTGTAGGTGGGTTCTTTACTACTGGGCCACCAGGAAAGCCCCCCAAATTTAAGCATATGTTTTTTATTATTTATAATTTTGGCCATACCACACGGCTTGTGGGATCTTAGTTCCTCGGCCAGAGAGTGAACCCGCGCCCTTGGCAGTGAAAGCGCAGAGTCCTAATCGCTGGACCAGCAGGTCAAGTCCCCTAACACCTGTGCTCGCACGTCCACTGTCTCGTTTGTGTATACCTGCCAGTGACCTGCACACAGCATGTCACACCTGGGCTTTTTGACTTAGCATGTCTGGCTGGCTGTCC EMBV3_34710 CCGGGCTTCCTGTACATCACCACTGAAAGATGAACTCCCCAGGTTGATAGGTGCCCAATA Gene BVV0102_294845 + 0 NULL GK000004.2:51748630-51781843 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08332 TTTTGTGTGGTTCTGCTGACTCATTTAGCATTTGCCCTGCTGTCTGGAGCCAGAACGCCG Gene BVT0102_111149 - 0 NULL GK000023.2:17856149-17867555 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34195 GTCGAAGTTCCACTGGTTTCGAAAAACATTTGCCAGTTTGTCTTGGAGGTTGGCATTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05537 CAGAAAACATCCAGTACAGACCTTTCTGATTTCCCTCCTCTCCCAGCAAACGCTATTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12072 GAAACCACTTGAGCCGGAAGTGTGAACTGATAATTCCAGAGACATTGTCAACGTACTTCA Gene BVT0102_073004 - 1 EMBV3_13265 GK000001.2:84033891-84062773 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004390 TCONS_00004393 TCONS_00004388 TCONS_00004387 TCONS_00004392 TCONS_00004391 TCONS_00004394 TCONS_00004389 1 XLOC_001029 Coding TCONS_00004391 XLOC_001029 Coding Coding KLHL24 1:84058027-84095673 j TSS2196 6261 1 TCONS_00004391_2 368 9 0.833922167618542 2.55903269576618e-61 1.32722507451354e-13 4.2228507350549e-188 2.0847130331177e-06 1.6045297936129e-24 5.08636146531829e-07 3.41031402333652e-70 1.30933149337477e-154 8.42676057335231e-05 0.000320188662877996 0.000155791095635922 0.000108788137649358 9.67688680704301e-06 4.55443463206861e-28 1.44019905259542e-05 0.000998546630747815 0.00086168588629744 0.00129891856725348 2.48979015287709e-26 2.68008940425396e-06 2.66674447313429e-07 0.00055874634028316 6.44728321142114e-08 0.00071308665225457 1.97037098731203e-66 1.3815860778776e-41 1.87901667402239e-86 0.000260887695108818 0.000127110299644041 0.000436463829610659 XM_005201597.1 KLHL24 PREDICTED: Bos taurus kelch-like 24 (Drosophila) (KLHL24), 0.0 9506 100.00 0.841718575307459 NM_017644.3 KLHL24 Homo sapiens kelch-like family member 24 (KLHL24), mRNA. 0.0 2206 85.77 0.30218814885801 TCONS_00004391_2 sp|Q6TFL4|KLH24_HUMAN KLH24_HUMAN Kelch-like protein 24; 0.0 696 99.40 0.89945652173913 6 coding 0 0 0 0 -0.0151901794246985 0.919083414897834 0.000124234491719055 0.997897659180626 GGCTTCTTCCAGCCTTCGCCGAGAGGTGTGGAAAAACTGGGGCTTTGATCAAGCAAATGCTGGAAAGCCACATAAAGAAAATCTGTAACAGTTATTTCTCAACAATTATATAGTCAACTGATGTAACAATGGTACTAATATTGGGACGAAGACTAAACAGAGAGGATCTCGGGGTGCGTGATTCACCAGCAACAAAGCGTAAAGTTTTTGAAATGGACCCTAAATCTCTGACAGGCCTTGAGGTGGACCAGTTGATCCAGAATTCTCCTGAGTGCTATCAATTGTTGCATGAAGCAAGACGGTACCACATACTTGGGAATGAAATGATGTCTCCAAGGACTAGGCCACGCAGGTCAACTGGCTATTCTGAGGTGATAGTTGTCGTTGGAGGCTGTGAACGAGTTGGAGGATTTAATCTTCCATACACTGAGTGTTACGACCCTGTAACAGGAGAGTGGAAGTCTTTGGCTAAACTTCCCGAATTTACCAAATCAGAGTATGCAGTCTGTGCTCTAAGGAATGACATTCTTGTTTCAGGTGGAAGAATCAATGGACGTGATGTCTGGATTTATAACTCACAGTTAAATATTTGGATCAGAGTTGCTTCTCTAAATAAAGGCAGATGGCGTCACAAAATGGCTGTCCTCCTTGGTAAAGTATATGTTGTTGGAGGCTATGATGGGCAAAACAGACTTAGCAGCGTAGAATGTTATGATTCCTTTTCAAATCGATGGACTGAAGTTGCTCCCCTTAAGGAAGCAGTAAGTTCTCCTGCCGTGACCAGCTGTGTGGGCAAATTGTTTGTGATTGGTGGAGGACCTGATGATAATACTTGTTCTGATAAGGTTCAATCCTATGATCCAGAAACCAATTCTTGGCTACTTCGTGCAGCTATTCCTATTGCCAAGAGGTGTATAACAGCCGTATCCTTAAACAACCTGATATATGTTGCTGGTGGACTGACCAAGGCAATATACTGTTATGATCCAGTTGAAGATTACTGGATGCATGTACAGAATACATTCAGCCGACAGGAAAACTGTGGTATGTCTGTATGTAATGGTAAAATATATATCCTGGGTGGAAGACGGGAAAATGGAGAAGCTACAGACACTATTCTCTGTTACGATCCTGCCACAAGTATCATCACAGGGGTAGCTGCAATGCCCAGGCCAGTGTCCTATCACGGATGTGTGACTATTCACAGATACAATGAGAAATGCTTCAAGCTCTGACGCCAGCGTACCTCACCCAGGAAGCCACAGCAATCCAAGATGAGAGGTTTTAAAAACTCCAGAGTGGGAACTTGGTTTATCTCCTTTATGCCATATGCACAAAAAAACAAAAATAATAATTGTCGTGCCTTTCTCCCCCAAATACCAATCTTTTAAACTATAATAAAGCCTTTTCTGTAATTGGGGAAAAAAAAGGTAATAGTTTTGAAGGTAATAGTGGTCTTTGCTTGGGCCGTGAGAGTGTACCTTTGTGAGTATTTGTTAAAAAAAAAAAAAAAAAGCCTATGTGGCATAGGAAATAATGTTTGCCTGCATACCATTTAGGAATTTGTGAATGGTCTCTTCATTTATGTATGTTTATCTGGAAGACTGTTTATTCCTTATTTTGTCACATAAGTGTGTATGTGTGTGTATATATATGTAGAAAATTGCATGACAAGTTTTCATTTAGGTCAAATCATGTAATGCTTAGAATGCTTAGAATCATTCTAAGGAGGGAAAGACAGTTTTAAAAATCTTTTTCACTAAAAAATACATCCAAATTGATTAACTTTATTATGTTTTTTTTCTGTAATTGATAAAACAGTAATGACAACAATCTGAGTATCATAAAATACTAAGTTATTGTGACTTCATTCTTGGAATTGCTTTCTTATATTAAAGATATTTTGGGGAGAAGATACAAAAGCAAGTCCCCCTAAAATGGGGATTAAAATTAAAGATTAGTTCCTAAGAAAAAGTTATCTAAGACCCTTGAAGGAAAAATGACCCACTGTGGCTCTCAAAAGTATTTATGTATCATCTCTAAATCCTCTAAGGGAAGTGCCTTTTCTTAAACCTGGCAGAAGAGCTGAAATCCACTTTGCAATATTATCTTGTGAAAAACAGGGACAGATTTTCTCCCTAGCCCAGTAGGGTTTGACCTCATTGGAATGGTGCTTTGGGTGAGGACCTCTTCCTGGTTATCCTGTTTTCTTGTGAACAGCTAAAAATCCTGGGAGTCTCTACTGTTAAGCTGCCCTTAAAGGATAAAGCAGGGACCACCTATCTCAGTGGGTCCATATTTCTTTTAAAGTTGACTATCTGAAGAAACTAACAGTAGTAGTAGCAGTTTTCTAAGATAAATCTTCATTTGGTACCCACTGTGTGAAATGTCGATCAACATTCTCACACTTCTCTACATCAAATTGCCTTTGTCTAGATGTTTCAACTCAAGTTTATAAAGCTTGCTAGTTTTCAGAGAAGAGAGTGAAATTTTTTTTTCTAAGGCAAATGGGATGGCAGGAACTACAGCACAAGTGATTGTTGTTATTCCTGGGTAAACAGATACAATTTACAGTATTTTAGGGATGTTCCAGGTAGCCTGTTCTCTTTCAGCTTCCCAGGCATTATTGTCATCTCACATCTTAATTATATATTCCTTGCCATAGGAGAAATGATGCAAATACGTGATTATAGTGTCACCAGGTTTTTGTTAAAACCAAAGTAGTAATCAAAAACCTAACATTGATAAACTTACTCTTCTTTTCCCATTTTAGAAGATACAGAGATTTCAAATACACTATACAGTATCAACTTTAATGCCTAGCTGGATTGTGAGTTCTGAGGAAAATTCTAAAAAACTTTTAACAAATTTTAGGGAATTTTTATTTTTCAAATCATAATTTGAAATTATCTGTACCTTTTTGTGATAATTATCAAAGCAATTCATAAGCCAGTTTTCTACCATTTTAGTTGAAAGACAATAGTAGATACAATTGGGAAACCTGTTTTAATTTTAGAGTAAGCATCTACTTCTGCATCATACCCTTTGTAGGTTATGGAACCTATTTAGTTCAGAAATTCTTTGTGGTGTGTGAGATAATGTATGAGAAAAGTGTTGGTAAATGCTGAGGACTATACAAATGATACTTGTTATTTTCATGTGTATTTGTAAGGTCATGCCCATCCGTAAATATAGACACTTTCTTACAGAAAAGCCTTTCTCAGTGTAACCTATATTTTAGTACTTTTGTAAGTATTAACTATTTACTTGTATTTTGTTATATGTTTATTTTTAATATTCATGTGTTTATTACAGTAAATTTGAAATGAAATCCTATAAACCAGAATTTGTTTAAACATGGACCTTATGCCAATATTTTTAAATTTTTTTCTCTACATAATTTAAAACCACATAATTAGGTCACCAAGAACTTAGCTTGAATCCTATGAAATTAAAGTAACAATTTTTAAAGTTACCCAACAGATACTTTAATTTCCTTTCACTTCCTTTACTGATTTTTTTATAATGAGGTTAGCATAGATAAAATAATGAAGAATTTTAGGGTATAATTAGTATATCAAAAGGGATTTATCAACAAAATTGGTGTCAGATTATATTCATACTGTCATCACATAGCTGACATTTTCTTTTGGTTTGTGATGCTCATATAAGCCTTTGGGTTAGGTTAGTATGTATATACATGTGTATATATGTAGATAGATAGTATGCTCAATCTACACACATATATACAAAAACCAAGAATTTCAGCAGTTTCTGGTTTCTGATCAGAGAAAGGAACATAAAGTAAAAATTAGTTGATCTTACTAAATTCAATTCCAGACGTTGTTTTTTTTTAATATTGGGCATCTCTAGCGTGCTCTTGTACATACGAAAATATATGATGAATATTATTATGATGACTCATACAGTCAGAGTCTATATAACGCATACAATTTACAAGATCAGGAAACAAATTGGAGGGAGATACAAGTTTGGTAAACATAGCCATTGATACCTCAGTGGGAAAGGAATTCAAAAGTAGGTTTTGTGGATCAAGAGAAATGTACTTTTTTTTTTTTTTTCATGAACTTTAATCATTTTTCATGTGGTTCCTATATGTGAGTGAGCTATAACGTGATCTAATTTTTACAACAAAAAGACCTTCCTCTTCTGTTCTAATCTTCCCACTGACTTTACTGCACAGGTATGAAATGGTAGCCTATTGGATCTTTAGTAACTTTTTTTTTCCCTAGATGACTGAAACATAGGTATTTACTCCATTTAAACCAGGTGTTTAAAAAAATGATGTAAATACTCAGGGTATTAACTTGTCATTTTTGCCTAATTGGAGTGTTTAAAGTGCCATATCTAAGCAACTTTCAGTTCATAATTCTAGAGTAAATTCAGTTTGGTAAAGGGGCTTCACACGTGGTGGTGGTTAAACATTCACTTTTTTATATTTAGATGAAAATGTTTGTGGACTGATACATTTTCTCTTAGTGAATACGAATTGTTTATGTATCTCTACTGTCATACCCTTTTTGAAACTCAGGAAAGACAAAGGTTCAATTCTACTACTTTTGTCAGTATACAAACCAGGTGTGTTATTTTTCCTGTTGTCTGGATATGGCAATAGATTTTTTAAAAAGAAAGGCTGTGAGAACCCATACGTGAAAAGAGAGGATTGAATTGTTTGTGCCTTTTGTTTCTTGAGATTTATATGTGGAAAGGACATCATCTACTCCAGACTGTATTTTCAAAGAGAAGAAATTGCTATTTATGTGGTGCCAAGTGATAAAATAATGTCTCTTAAAGGCTTCCTGTGGACTGCCTTTATTTTCCTAAGCTCAAGACACCAGTTAACCTCAACATAAATTTGGCCTTTATTAGAATTTCTGTGCATTATATTGAAAGCTAGGTTTACATCACCTCACCCCATTATTCCTTTTAGTTACATAAATAAATTCACCATACCAAGAAACCAGAATGGGGCAATTTGGTTGGCCTTTAAGGCAACAGGTTTGACTAGCTAGCTATACTTATTGTCACATCTAATGCTAGGTATCAGAAACCACTTGAGCCGGAAGTGTGAACTGATAATTCCAGAGACATTGTCAACGTACTTCATACTTTTTTAAAAATGTTTTTTATGGATGTTTTACATTTGTGTGATTGCCTTAGGTATTAAATTAGTGCTAAAGATCATCATTAAAAATTTTTTTAAATAGCAGTAGTTGTAACTTATTTTATATATTGTCCCAAAGAAAAGAATTTGTTTTAATGTTTTCAAAATAACTGCATCTGTATTTGCTTATGTGCCTTAAGTTCTCTAGTTCTGTTTCAACTTTTTTTTTAATCTAAAGTTTACCTTAGATAAGTTCCATACTTATTTCCTATAAATTGCTCTTAAAATGTTTAATGAGCATCAACTATGTGGTTGCTTGGCAGGAAGGAAAATGTTAAGAAAGTGGTTTGGTGTTTGGAGTTTTACTATATTTGGGAAGGTTTTTTGTTTGATGCCAAGCTGCTTTTTAAGATTTTAAGAAAAAATCCTTGTAAACATCATCAATATCTATATCCAGTGTCAAAAAAGTAAATCTACTTACTCTTGTTCCATTCTTAGGTACTGTTTTTTTGTTTTTTCCTCTACAGACTCTTTCATTTATCTTTTTTGAAAAAGTTCTTAATCTTTCCTCCCCCAATACCCACTCCATGGTTTCTTTATTTAAATCTTGTTGAAAGTCTCTGGAGCTAATCTAAGACAACACAATTATAGAGTTGAACAAAAGCGTACTGTGCTTTACAACATGTACAGACCTGTGGCAGCCAGATGTCATTTGCTTTCAGATGCTCCAGTCTTCACAGTTAAAAAAAAAATGCTCCTTGTTTCTTTGTTTTCATCAGTTGCGGCACACTAATACTTTCATGTCTCGTCTAAAATATACTTTGTGCATAGTTTTTCTTTAATTTTTAAAAAGTTGTATCTAATAAAAAAAAAGTCTTTTAACCATTATTACTTGACTACAGTTGTATTAAATTTTATTTACCAAAAACTAATTGTTGTGTCTTAAATATATTCAAGTGGTTGTTTGAAAAAGGAATGGGGGAAATTACAAGTTAACATATGTGTTTATTGGTAAGTCCACAAAGTAACTAGAAGGCCAAACAAAAAACTGAAAACATTGGTGTGTGTGAGGAAATGGTGGCTTTTTTTAATGATTTTTTAAACTTTTAATTATGAAAGTGATCCATCACATTTGC EMBV3_17851 TGGCAGCTTGGTTGGTAGGTTGTCTTCAGGCCACCATCCTGACATCCTTTACCTTTCAGC Gene GeneID:782366|LOC782366:XM_002699126:196_cdna Constitutive 0 NULL GeneID:782366 29 GENE LOC782366 NULL similar to olfactory receptor Olr1308 EMBV3_22165 AGGCGGAGGCCTCCGCCGAGCGCGTGAGAGGGTGCACAGATCATAGTGTTTCCAGAAGAC Variant GeneID:537669|BTD:NM_001102206:20_cdna 370^640 1 EMBV3_14525 GeneID:537669 1 GENE BTD Biotinase MGC159696 biotinidase EMBV3_10575 GTATTCTTTTCTGTATAGTGGGTTTGCCTAGGGACATATAACCATGGGGCTTTTCTAAGC Gene GeneID:614165|SPTLC1:NM_001034749:105_cdna Constitutive 0 NULL GeneID:614165 8 GENE SPTLC1 MGC128963 serine palmitoyltransferase, long chain base subunit 1 EMBV3_04558 ACACAGAATAAAGCCAGCAGGAAGAGACAGCATGAGGAACCAGAAAGCTTCTTCACCTGG Gene GeneID:782688|LOC782688:XR_084108:104_cdna Constitutive 0 NULL GeneID:782688 29 PSEUDO LOC782688 NULL hypothetical LOC782688 EMBV3_13000 TGCTGACCACGTACACAGGCCCCGGCTCCAGAACACTACTGTAACTACCTACCCAATAAA Gene BVT0102_104384 - 0 NULL GK000005.2:107397565-107398942 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193206 TCONS_00193201 TCONS_00193203 TCONS_00193202 TCONS_00193205 TCONS_00193204 TCONS_00193200 TCONS_00193207 1 XLOC_117418 Coding TCONS_00193207 XLOC_117418 Coding Coding FOXM1 5:107384791-107398763 j TSS144452 3717 1 TCONS_00193207_2 758 9 0.734593085677475 1.01320025420656e-10 1.16967156414057e-54 4.95037820340434e-26 5.13044660141218e-08 3.77235791442901e-18 0.000171636789818722 6.31416696523917e-41 2.34761511435512e-43 2.30886615252547e-10 0.00029215085811422 2.57268533062474e-39 6.40248589257055e-17 4.02116539790134e-05 1.20897587937784e-31 3.1817289477124e-05 0.00102263362165219 0.000727694688372073 2.30958665244127e-05 3.79730801328911e-05 0.000469624126528021 2.6047087549319e-52 3.82451293319517e-05 0.00013310480300185 0.000319896757913089 0.000282623602576078 1.32103527198398e-05 3.52932205005449e-53 0.000271276758202506 4.11071621052094e-05 1.74125090818096e-23 XM_872119.6 FOXM1 PREDICTED: Bos taurus forkhead box M1 (FOXM1), transcript variant 0.0 5900 99.73 0.882970137207425 NM_021953.3 FOXM1 Homo sapiens forkhead box M1 (FOXM1), transcript variant 2, mRNA. 0.0 2558 77.83 0.862254506322303 TCONS_00193207_2 sp|Q08050|FOXM1_HUMAN FOXM1_HUMAN Forkhead box protein M1; 0.0 1129 78.01 0.997361477572559 1 coding 1 0 1 0 -0.0648796996360429 0.699554290062846 0.0199568548953928 0.687038618441643 GGGGTCCACGCTTGTGATGCTCAATGGAGAGTGAAAGCGCAGATTCATGATGAAAACTAGCCCCCGTAGGCCATTGATTCTCAAAAGACGGAGGCTGCCCCTTCCTGTTCACAATGCTCCAGGTGACACAGCAGAGGAGGAGCCGAAGGGGCCCCCTGCCCAACAAGAGCCTGCTCAAGCGCAAGCCCCCAAGGAGGTGGCAGAGCCCAACCCCTGCAAGTTTCCAGCCGGAATCAAGATCCTGAACCACCCAACCATGCCCAACACCCAAGTGGTGGTCGTCCCCAACAATGCCAACATCCAGAGCATCATCACAGCACTGACCGCCAAAGGGAAGGAGAGTGGCAGCAGTGGGCCCAACAAGTTCATCCTCATCAGCTGTGGGGGAGCCCCCACTCCCCCTCCAGGACCCCAGCATCAAGCCCAAACCAGCAAGGACCCCAAGAGGACAGAAGTGATCACCGAGACCCTGGGACCAAAGTCTGCAACTGGGGATGAGAATCTTCCAAGACCAGCGGGAGCCCTTCCTGGGCAGAAATGGAAGAACTGTGCTGGCGGTGAGGCAGCCAGCTGCCCCCTGGACAACAGCTTGACCAACATCCAGTGGCTTGGAAAGATGACTTCCGACGGGCTGGGCTCCTGCAGCATCAAGCAAGAGGTGGAAGAAAAGGAGAATCGTCACCTGGAGCAGAGTCAGGCCAAGGTGGAGAGGCCCCCTGGAGCGTCGGCACCCTGGCCGGACTCCGTGTCTGAACGACCCCCATACTCCTACATGGCCATGATACAATTCGCCATCAACAGCACAGAGAGGAAGCGCATGACCCTGAAAGACATCTACTCTTGGATCGAGGACCACTTCCCCTATTTCAAGCACATCGCCAAGCCAGGCTGGAAGAACTCCATCCGCCACAACCTCTCTCTACATGACATGTTCGTCCGTGAGACATCTGCCAACGGCAAGGTCTCCTTCTGGACCATTCACCCCAGTGCCAATCGCTACCTGACACTTGACCAGGTATTTAAGCCACTGGACCCAGGGTCTGCACACTCGCCCGAGCACTCGGAATCACAGCAGAAACGGCCCAACCCTGATCTCCGCCGGAACGTGGCCATCAAAACCGAACTCCCCCTGGGTGCACGGCGGAAGATGAAGCCACTACTGCCGCGGGTCAGCTCATACCTGGTGCCCATCCAGTTCCCCGCGAACCCGTCGCTGGTGCTGCAGCCCTCGGTCAAGGTGCCCTTGCCCCTGGCGGCCTCGCTCTCAGAGCTTGCCCGCCACAGCAAGCGAGTCCGCATCGCCCCCAAGGTGCTGCTAGCGGATGAGGGGGTGGCCTCTCTGCCCACGGCAGGACCGGTGACAGAGGAGAAGCTACTCCTCGCGGAAGGACTCTCTCCTCTGCTTCCTGTCCCGTCCATCAAGGAGGAAGACGTCCATCCTGGGGAGGAGACACCACATCTAGGGAGGCCCATCAAAGTCGAGAGCCCACCCCTGGAAGCGTGGCCTTCACCCTGCCCATCGGTCAAGGAAGAGTCATCCCACTCCTGGGAGGACTCGTCCTGCTCCCCAACCCCCAGGCCCAAGAAGTCCTCCAGCACTGGGTCCAGGTCCCCCACCCGCCGTGTCTCCGACCTGCTGGTGATCAAACGCAGGGAGGGGCGGGAGATGAGCCGGTCTCGGAGGAAACAGCACCTCGTGCCGCCCCGCCTGGAGGAGCCTGAGCTGCTCCTCTCCGAGGGCCCGGGGGCTCCCCAACCAGCCCTGGCAGGGCCCCCGCAGCCTACCTGCCAGCCCGGCTCCCCGCCAGAAGACGGAGGCCCCTTTAAGACACCCATTAAGGAGATGCTGCCCACCTCCTCCACCCCCAGCAAATCTGCCCTCCCCACGACCCCTGAGTCCTGGAGGCTCACACCCCCAGCCAAAGTCGGGGGGCTCGACTTCAGCCCTGTACGAACCCCCCAGGGTGCCTTTGGCCCCCTGCCGGGCTCCCTGGAGCTCGCGGATCTCAGTGCCACCCCTCTGAAAAGCGTCCCCCTCTTTGACTCCCCCCGAGAGCTCCTCAATTCCGAACCCTTTGACCTCGCCACTGACCCCTTCGGCAGCTGCCTGCCCTCCGACATGGAGGTCCCCAAGCCGGGTTCCCCCGAGCCGCAGGTGGCCGGCCTCTCGGCCAACCGCTCTCTGACCGAGGGCCTGATCCTGGACACGATGAATGACAGCCTCAGCAAAATCTTGCTGGACATCAGCTTCCCTGGCCTGGAGGAGGACCTGCTGGGCCCCGGCAGCGTTGGCTGGACTCAGTGCATTCCTGACCTGCGGTAGAGGCAGGGCTCCTGCCCCTCAAGCCATCCACTCACTCTCCAGGCGCTCGGGGGCCGGCCTTCCGAGTCCTCTGCGAGGACAGTCTGCAGGGGCCATCCACTCGCCCAGTGCCCCACTCCCCGGACTGGCGATGCTACAGCAGGCGCCCTGTCTGAGCCACTCCTGGGCCTTCTGCAAGCAGCAAGGTCCTGGGGGCTGGTCTCTATGCCCCCAGCTCCCCACCAGGCACTGAGGGTGGGAACAGCAGAAACAGGGTGAGAAGGGAGGAGGGGCCCCCAGACCGTTGGCATCTGTGCCCAACAACATCCCTCCGCCTTCCCTGCTGCATGCAAGGTGGCCCTTGTAAATAGTGTATATGCTCCAAATTATCCTCTAATTATAAACGTAAGCCTATCTTCTTAGATCATTATCCAGAGACTGCCAGAAGAGGGGTAGGATGACGGGGCGGGGGTTCCAGTTTGCTTCTGTCCCTTGCTTTTGGCTCCTGGAGGCGGGAGGGCTGCAATGCACGGTTCCTTCGGGGCCCCTCCCTCGAGAGTTCCTCGCAGTGGGTGCCCAGAGGAGCGGGTCTGCCTGCCAGGGTGCCTCGCACTGCTCTTCCCTCCCACCAGCCCCCATTTCCAAGTCAGCTTTCCTGCACGAAGAAATCCGGGTAAAGGGGGCCCTTATTATGGGTCAAGAGTTGAGGTGGGGGTGGAAGTACCTGGACCAGAGTGGCTGCCCCCACATGCCCAAGAGACGTTTCTCTGATCAGGAACCTAATCATGCCAGAGAGACACGACAGAAGGTGGAGGCCAGCCAGCCTGCCCGCCTTACCTGGCCTGCCTGCCCACCTTAGCTGGCACCACCGCTTCGTAGAGAGCCGCCCTGGGTCCCTGCTGACCACGTACACAGGCCCCGGCTCCAGAACACTACTGTAACTACCTACCCAATAAAGCCCAAGGGCACGTGCTGGTCTGTGCGCGCTGGTGTCTGGTCCCTGTGGCGTGAGGAGGGGCTGGGAAGGAAAGCGTGTGACAGTGAACCTGGCGATGGGGAAGATGCAAGGCTTGAGGGCCCTGGAAGGAGAGTGCAGAGGGCTTCAGCCTGGTCACCGCACTCCCCACACCCCACCCCCATCCCCACCCTGGTACCTCCTCTAACTCAGCAGTCAGCTGCAGGTCTCCCATGCTGGTCCCTCATAACAGTCCTCTTTTCGGGATCTCTGAACCTGCTGGAGGAATTTGGGCCTTTTGGAGAGAGCTCCCTAAGAGAGAGGCCTACCCAGCAACCCCCCAGCCCCCAACGTTAGGGAAGGATGCCTGCGAGCCAGCGACCCTGCCTTTCTCCCCCTGCCTTCCTAGCAAGAAATCCCTCCCCTGAAGCAGCTCCTGTTACAAGTTCTATCCCCCACC EMBV3_22311 TTGCCAAAGCCAACACCAAGATGGCCAAGAACAAGCTAATGGCTACACCAAATCCCACCA Gene GeneID:518188|RBPMS2:XM_002690872:274_cdna Constitutive 0 NULL GeneID:518188 10 GENE RBPMS2 NULL RNA binding protein with multiple splicing 2 EMBV3_32899 ACGCACACAGACACGGCACGCACACGCAGAGGACGCTTCGGGTATACAAAATCTGAGGCA Gene BVV0102_343639 - 0 NULL GK000011.2:97859548-98028248 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026055 TCONS_00026063 TCONS_00026062 TCONS_00026066 1 XLOC_014914 Coding TCONS_00026055 XLOC_014914 Coding Coding RALGPS1 11:97674054-97976361 j TSS18784 2731 1 TCONS_00026055_2 557 20 0.991032265320569 1.6710254456461e-16 0.000225742442110421 0.000196494405162038 1.28731646302544e-05 1.58025076527153e-13 3.37699212655551e-39 7.64661524992148e-25 2.05827395995802e-06 9.49130392592651e-05 8.01699062222503e-12 0 0 0 2.84502259396127e-09 7.27058440194287e-31 0.00105854137079149 0.00044965494823626 7.96511349285904e-15 0.000304074237426011 1.38341685445051e-20 5.76289159007972e-05 5.59304750204352e-139 1.24558149112063e-25 4.80539701790661e-34 6.74468925302279e-07 0.000217396995723959 2.09734590413359e-10 0 2.62976219525691e-06 1.99874117011287e-09 NM_001193100.1 RALGPS1 Bos taurus Ral GEF with PH domain and SH3 binding motif 1 (RALGPS1), mRNA. 0.0 3283 99.46 0.675210545587697 NM_014636.2 RALGPS1 Homo sapiens Ral GEF with PH domain and SH3 binding motif 1 (RALGPS1), transcript variant 1, mRNA. 0.0 3268 87.78 0.948370560234346 TCONS_00026055_2 sp|Q5JS13|RGPS1_HUMAN RGPS1_HUMAN Ras-specific guanine nucleotide-releasing factor RalGPS1; 0.0 1135 98.20 0.998204667863555 2 coding 0 0 0 0 0.000953107694181751 0.994957089060808 -0.0118268011289974 0.863716775031668 CAGCCGCTGCGGCCCGCGTCAAGGTGACCGGCCAGGACTGCGGCGGCGAGAGCGGGCGAGGCTCCTGTTTGGAAAGAGACCTGCTGGGACGGTTTATCCTGTTGGCCTGGGATTATGAAGCCCAACACGTGTTCCTGGACTTCTCCAGACAGGTTATGTCACCGACAGAGGCTGCCCTGAAGCTCTCTGTGGCCTGGAGACTATGTACAAGAGGAATGGTCTGATGGCTAGCGTGTTGGTCACCTCCGCCACTCCACAGGGCAGCAGCAGCTCAGACTCTCTGGAGGGCCAGAGCTGCGACTATGCCAGCAAGAGCTACGACGCCGTTGTCTTCGATGTCCTGAAAGTGACTCCCGAGGAGTTTGCCAGCCAGATCACGCTAATGGACATACCCGTGTTTAAAGCCATCCAGCCGGAGGAACTAGCCAGCTGTGGATGGAGTAAGAAGGAGAAACATAGTCTCGCCCCCAACGTCGTGGCCTTTACCCGGAGGTTTAACCAGGTCAGTTTTTGGGTTGTACGAGAAATTCTAACAGCACAGACTTTAAAAATAAGGGCAGAAATCCTGAGCCATTTTGTGAAAATAGCCAAGAAACTTCTAGAACTCAACAACCTTCATTCTCTCATGTCTGTGGTGTCAGCATTGCAGAGCGCACCCATCTTCAGGCTGACGAAAACCTGGGCTCTTTTGAATCGAAAAGATAAGACCACCTTTGAGAAACTGGACTACCTGATGTCCAAAGAAGATAATTACAAGCGGACTCGGGAATATATCCGAAGCCTGAAGATGGTTCCCAGTATTCCCTATCTAGGCATCTATCTTCTGGATTTAATCTACATTGATTCTGCGTATCCTGCCTCAGGCAGCATCATGGAAAACGAACAAAGATCCAATCAGATGAACAATATTCTCCGAATAATTGCTGACTTACAAGTTTCCTGCAGCTACGACCACCTCACCACCCTGCCCCACGTGCAGAAGTACCTGAAGTCCGTGCGCTACATTGAAGAGCTCCAGAAGTTCGTGGAGGACGACAACTACAAACTGTCACTCCGAATTGAACCAGGAAGCAGCTCCCCGAGACTAGTCTCTTCCAAGGAAGATCTTGCAGGCCCATCCAGTGGCTCCAGTTCCGCAAGGTTCAGCCGGCGGCCCACCTGTCCGGACGCCTCTGTGGCCGGCAGCATCCCCACACCCCCGGTCCCGAGACACAGGAAGAGCCACAGCCTGGGCAACAATATGATGTGTCAGTTGAGTGTAGTTGAGAGTAAAAGCGCGACATTCCCGTCGGAGAAAGCGAGGCACCTGCTGGATGACAGTGTCCTAGAGCCCCGCAGCCCCCGCAGGGGCCTCGCCCTTGCCTCCTCCTCCGCCGTCACCAACGGACTCTCCCTCGGCAGTAGTGAGAGCTCAGAGTTTAGTGAAGAGATGTCTTCAGGGCTGGAAAGCCCCACCGGTCCATGTATCTGTACACTGGGGAGCTCTGCGGCGACCCCCACCATGGAGGGGCCTCTGAGAAGGAAAACTCTGCTCAAGGAGGGACGGAAGCCCGCGCTGTCTTCATGGACCAGGTACTGGGTCATACTCTCAGGATCCACCCTCCTGTACTACGGAGCCAAGTCCTTGCGGGGCACAGACAGAAAACATTATAAATCCACACCTGGTAAGAAGGTCTCCGTCGTGGGCTGGATGGTGCAGCTGCCCGACGACCCTGAGCACCCGGACATATTCCAGCTGAATAACCCCGACAAAGGCAATGTTTACAAGTTCCAGACTGGCTCCCGGTTCCATGCAATCCTGTGGCACAAGCATTTGGATGATGCATGTAAAAGCAACAGGCCTCAGGTACCTGCAAACCTTATGTCATTTGAATAAGTCTCTGCAGGACTTGGCGTGACTTCGGAGGCCTCTGGGAGCCCAGCCTGGGACTGGTGGCCAAGCGCACATCGGGGCACAGGCCGCTGGCGGGGTGCTGGGAGACTCAGACCTGGGCTTGAGGGGACACGGCCTCACAGTCCGGAGGGCTCTGCCGGTGTGGGGTCCACCTGCCGATCCCCAGCCATCCTCATGCCCCTCATTCTGCAGCACCACCTCGCAGGGCCTTGATCGGTCCGCAGACTGTACACCCTGCCTGCCCGCCTGCCCAGCCTGGGCCCATGTCTGTCCACCAGCTGCTGCTGCGACCAGAGAGCACCCGGCCCACGTTGGGTCCCCAGGGCTTTCTCCTGCACAAAGAGTGGACGGCGACCCCCATGTGAGGGCCAGAGGGACAAGACAGGCTGGGGACTGGCTCTTTTCACCCCAGCGCGTGGGGTCGCTTGCCCACAGGGCTGCCTCAGATTTTGTATACCCGAAGCGTCCTCTGCGTGTGCGTGCCGTGTCTGTGTGCGTGCAAGCGAGCGAGCGTGGACTATCCGAGAAACATGCATTTTGGCACAAGACTCGTGACATCACACACTTCATTCTCTCTGAGGCCCTGCTTTCACCTTAAGCGATAGACTCATCCACCGAGGAAGGTCAGAGTGAGAGCCCAGTTTCCTCCTGTGTTAAGGGTCCCTCGCATTCTTTTACTGTAAACAAACAATGCCTTAAATTGTGTCTTGTTTTCTGTTCCTATGGGTGCTATTCATCCGGAAGGCCTGCTCCCTGGGCCCGCAGGCCCTCCCAGGCCTTGTTGCGGTCGGCTCTTCTGAGATAGGACCCGGCTTCGGAACCATGGACTGGGCCAGC EMBV3_21792 CCAGTCCCCAACTGCTCTTCCTTTCAGCTTCTTGACCTCACCAAGGGCCTCATAAAAATG Gene BVV0102_172646 + 1 EMBV3_21703 GK000013.2:39836939-39883196 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32338 AAGCTTTCTCAGAAACGGAAGACACTGCTGCCCACCAGAGGGAAAAAATTCGGGCTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19110 ATAGAGACTCTTTGTAAATGCAGGACGAGGAACAGCAGCAAGGTGCCAAGCTGAGCCTGA Gene BVT0102_106811 + 1 EMBV3_21885 GK000012.2:1902768-2067518 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42283 TTTCTGTTGCAGGAAGCCACTCCACCACAGAATGCTAATATGCCAGTGGTACCCAGTACC Gene GeneID:529366|SLMAP:XM_002696995:372_cdna UTR3_Alt 2 NULL GeneID:529366 22 GENE SLMAP NULL sarcolemma associated protein EMBV3_41308 GTTGCTCTCATCTACGGCCATACCACCCGAATGAACCCTATCTTGTCTAAAATTGTTGCC Gene BVV0102_298727 + 0 NULL GK000001.2:61780988-62162864 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01563 TATGGACCAACCGTTAGTTGAACATTTCAGTAATCTTGCTCAGAACACAAATTTACTGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11556 GCTAATTGGTTGATTTTGTGCTGATGTGTGCTGCTGCCTGTATAAATTATTAAGATAGAG Gene BVT0102_044591 - 1 EMBV3_42658 GK000010.2:86661343-86669627 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022846 1 XLOC_013516 NonCoding TCONS_00022846 XLOC_013516 NonCoding NonCoding - 10:86667143-86667951 - TSS16736 808 0.242574257425743 1 0 0 0 0 0 6.72140496254181e-05 0 0 0 0 0 0 3.98281394517574e-05 0 0 0 0 0.00410947984322619 0 0 0 0 0 0 0 0 0 0 0 0 3.72045501640372e-05 XR_229067.1 LOC101904857 PREDICTED: Bos taurus uncharacterized LOC101904857 (LOC101904857), 9e-07 59.0 92.50 0.0482673267326733 XM_005267531.1 MLH3 PREDICTED: Homo sapiens mutL homolog 3 (E. coli) (MLH3), transcript 1e-36 158 72.19 0.353960396039604 0 noncoding 0 0 0 0 -0.346153166212243 0.262406400580469 -0.031889660048453 0.560556433138221 TGAAGCGACTTAGCAGCAGCAGCAGCAGGGGACTTTGTAAGGATGAGAGATCACGTATACAAAGCGTTTGGTATATAGTGAGCCCTCAGGAAACGGTAGCCAGCATTGTTCTTGGAGCCGGAAAACATGGATGCCATGCTCTGCTTTACTTATTAGCTGTGTGATGTTAGACAATATTTTTCAGCCTTGGTTTCCCACTTTGTAGAATGGAGAGAATAATTACCACCTTATTTCACGGGTTGCCAAGAATTCAAGTAAGTTACACAAATATAATTTGTAAACCTTAAAACACCATATAGGAAATAATGATTACCGTGCTGTTTGAAAATTAAATGTAGGTCTGCTCTTATGGCACCTGATTTAAAAAAACTTAACAGAATGCTAACAGGCAATAAAAGTAATGATATTTTTTGCTAATTGGTTGATTTTGTGCTGATGTGTGCTGCTGCCTGTATAAATTATTAAGATAGAGAACACTTTGTATTATATGTGTGTTTAATTGAATTCTGAAACTTCAGTGGAATTATAAAACCTTGGCTGTTTTAGGTAAATTTTGGAAATAACAAATTCATTTTCTTTCTTATTACCTGAATGTGATAGGATAAAAACAGTAAGGATAACATGTATATAGTGACTACATAACCAGTGTTTTTACCCTTTTGTTATGATTGCTGCTATGTGAAATTAAAGATACTAGATTGATGTAGCTATGTAATCAGCATTTTGACTCTTTGTTATAAATCATTTCTGCTGTGTAAAGATAAAGATGGGTAGATTAATAAAAAATTGTTTTGAGAAAGAATAATTA TCONS_00018297 TCONS_00018298 TCONS_00018299 TCONS_00018300 TCONS_00018301 TCONS_00018302 TCONS_00018303 TCONS_00018304 . 3' 1125 TCONS_00018297 TCONS_00018298 TCONS_00018299 TCONS_00018300 TCONS_00018301 TCONS_00018302 TCONS_00018303 TCONS_00018304 . 3' 1932 EMBV3_21441 CAAAGCACACACACACACAAAATCATCTTCACATACTCAACAAATCCTTATGTTTTGGGC Gene GeneID:614183|NUDT4:NM_001081618:46_cdna Constitutive 2 NULL GeneID:614183 5 GENE NUDT4 MGC155166 nudix (nucleoside diphosphate linked moiety X)-type motif 4 EMBV3_23418 GTCCAACTCAGCAAGCTTTTCTCAAAGCCAAGTCTGCTTGAAGAGATGAATTATTCTGAG Gene BVT0101_012423 + 1 EMBV3_31374 GK000002.2:58712392-58797479 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105352 TCONS_00105347 TCONS_00105359 TCONS_00105350 TCONS_00105346 TCONS_00105348 TCONS_00105349 TCONS_00105351 1 XLOC_062555 Coding TCONS_00105346 XLOC_062555 Coding Coding SPOPL 2:58793287-58847138 j TSS77769 4892 1 TCONS_00105346_3 392 0.0650040883074407 12 0.909377901578459 1.05103074640422e-09 8.84118056499004e-80 1.93907476415635e-05 0.000147305154224491 8.52481450495618e-06 6.74556006121124e-25 8.31304897330336e-32 4.72258964271544e-24 8.06506867271146e-05 0.000343961185758719 0.000322223223606759 0.000258581169635774 8.08119778951687e-08 6.18454628009517e-05 7.23369228749116e-05 0.000743452911237708 2.45868166609667e-10 1.9696790276635e-06 3.85122347037863e-05 0.000151121347843369 6.77518536749036e-06 2.09477641104336e-28 7.80500551154152e-09 0.000467640638971585 8.57981897941805e-05 3.24571507599896e-26 3.83060079157078e-14 1.1378082729783e-14 0.000164431238841026 0.00044297735697114 XR_230330.1 SPOPL PREDICTED: Bos taurus speckle-type POZ protein-like (SPOPL), 0.0 6868 100.00 0.778209321340965 NM_001001664.2 SPOPL Homo sapiens speckle-type POZ protein-like (SPOPL), mRNA. 0.0 2340 91.05 0.324816026165168 TCONS_00105346_3 sp|Q6IQ16|SPOPL_HUMAN SPOPL_HUMAN Speckle-type POZ protein-like; 0.0 779 97.96 0.997448979591837 2 coding 0 0 0 0 0.0467474735570864 0.781969178790159 -0.00180447278058077 0.970522783695843 GCGGGAGCGGCGGAGGCGGCCGCCCCTGGCGGCGGGTTTGTTTATCCCGGGGAAGAAGTTTAGGAGCGGGAGACAGGGGAGAAGGGCGGACTGGGGAGGAGGGATGCGGCTCGGCGGAGGCGGTCGCCACAGGGACTCGCCGCCATCACCTCAGCCGGAGAGGAGCCGCCGCTGGGACTGCCCGCCGCTACCCCTCACGTCCGGTAAAGTACTCACCTGTGTGGGATATTGCATACATCTTAGAAGACTGCAATAAAGTGGCAATGTCTCGGGAACCCACCCCACCTCTCTCTGGAGATATGTCTATCGGTCCTATAGCAGAAAGCTGGTGTTATACACAGGTTAAAGTAGTAAAATTTTCCTACATGTGGACCATTAATAACTTCAGTTTTTGTCGAGAAGAAATGGGTGAAGTGTTAAAAAGTTCAACATTCTCATCTAGCCCCAGTGACAAAATGAAATGGTGCCTGAGAGTAAATCCAAAGGGATTAGATGATGAAAGTAAAGACTACTTGTCGTTATATTTGCTTTTAGTCAGCTGTCCAAAAAGTGAAGTTCGAGCAAAATTCAAATTTTCCCTTCTGAATGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATATCGATTTGTACAAGGGAAGGACTGGGGTTTTAAAAAATTCATTCGAAGAGATTTTTTGCTTGATGAAGCTAATGGTCTTTTACCAGATGACAAGCTTACATTATTTTGTGAGGTGAGTGTGGTCCAAGATTCAGTAAATATATCAGGACATACTAATACAAATATGTTAAAGGTACCTGAATGCCGACTAGCAGAAGATTTAGGTAATCTCTGGGAAAACACAAGATTTACAGATTGCAGTTTTTTTGTGAGAGGACAAGAATTTAAAGCTCATAAATCTGTTCTTGCAGCTCGATCCCCAGTTTTTAATGCCATGTTTGAACATGAAATGGAAGAAAGTAAAAAGAATCGAGTGGAAATAAATGATGTAGACCCTGAGGTTTTTAAAGAAATGATGAGATTCATTTACACAGGGAAAGCGCCAAACCTTGACAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGTGTGAAGAAGCTTTGTGTAGTAACCTCTCAGTAGAAAATGTTGCTGATACCCTTGTCCTTGCAGATTTGCACAGTGCAGAACAATTGAAAGCACAAGCCATAGACTTTATTAATAGGTGCAGTGTACTTCGACAGCTTGGGTGTAAAGATGGGAAAAACTGGAACAGCAACCAAGCAGCGGACATAATGGAAACATCTGGGTGGAAGTCCATGATTCATTCTCACCCACATTTGGTAGCAGAAGCCTTCCGAGCACTAGCATCTGCACAGTGTCCACAGTTTGGTATTCCACGAAAACGGCTAAAACAGTCTTGAAACCTTCCATGAACTGTAGAAAAATGGAATTGACTTTTACTCCTCCAGGTCCAGAAGGATTCTAATACACAAACCATAAGCGAGAGTTGTTTCTGTTGTTTTGTCCACAGAACAGAAGCTGAAAAAGCATATTGCTTGCATTTCAGGTATTTACTGAATCCTAATATGCCAAGAATGATTCGTATTTACATTGAACAAACACTGTCAAATAACCATTTGTTATCCACATCAAACTGAAGTTTGAAAAGATGGTATTTTCAGATATCTTCATTTCTTCTTTTGTAGTTTGAGTCTTTGTTGTATTAAGTTAAATTTAATATTGAAAGACTACCTTGGGATAGAAGAAGGATTCTTAGATATGAATGGACTCTGTCCTGTGTAAGAGTATTATAGGGAGTAGAAAACTATGTAAGAGTATTACAAGGAGCAGAAATTCACTTCTTAGCTAAACCATAAGATTGAGCCTTTTAAATTTACAGTGTGCAGCTTAAAAAAAAAAACACATACATACACACTTTAAGGATTTGAGATTTTGCCAGGGTCTTAGAAGAAAAAAATTCCTCTCTCAGGCCCTAGAATTTTGTTGTCACATATTAAAAAAAAAAAATACTGGTGTATCCATTTATATCAAATGCACACAGATGCATTGTGAATTAATTCACTGCTTGAATCTACATTTCTAACCATAGTGACTTCAGTGGTAACATCTATAATGTACATTTCAGCTTACCCTTACTTTTGTGTTTATTGCAAATCTGAAGGGTTTTATTATAAAGATTTTTTTTTAGTTTGGTAACACATTTTGTACCAAAAATGTCAAACACTGTGCTGTAAGGATATCCACGTTTGTAGAAATGTCCACTTTTCAGATAATTTAATGCCTACCAATTATATTAACAGAATCACATGGTAGTTGATTTATTTTTTTTATTTATTATGTATATTTTTGGTATTGTGGGTTCTTGAGGCATTGTAAAACTGTTAATGTATTCTGAAATGAGTGTTCTAATAGCCTTTAAAAAAAAAAACAACTATACACATGGTTTTCAGTAGACACAGATTTTGTTCCAAGCAGTGTTGCCTTTTGAACTAAAGCCTGCTCCTGTTTCCCTTTTGTCACCTAAACAGCTCTTTCTTAGAAAAGTAGTTACTGGTCTTAACGTTACATATTATAAAAGTAACCATTGGAGAACTGTTAGATTGAGATACAGAAACACTATATTTGTGCCTTTTTCATTTTTTAATTTTAGTGTGTATCGGTATTTGGAGCACAAATATGAAGGTGCCATCACATATGGCCTGCCATTGTTACCTCCTTGAATACTCATGTGTCATTGTCTTGAAATAGTAATTGGAGATCCTTGCATGTATTATGTGGTCATTAGGCATGTGTGTGTGCGTGTGTATGTGTGTCTATGTATATTTGCTTGGATTTGTGTGTGGTATGTTCAAAAGTGAATTTCTGAAAATAGGACTCAGTTAAATGTTGAAAGTTTAGGTTAGTTGAAATGTATTCCATTTAAATGTGCTTTATTTGGGGGGACAATTGAGGAAATTATAATTCTCAAAAATGTGACCAATTTACTGCATGATGAAATGTGAAAACAGTGCCTTTTTAGGACATCAGTTTTGAAATTGAGTTTAAAAATATAATGAAGATCTCTTAAAAATTTGTCATGAACATTAATGTTTTATTTTTAAACTAAATTTAAGTTAGAGCTTAAATTGCCAGACATGTAATTAACTAATTTATTTACCCATTTAAGTTTTGTGCATAAATTCAAAATCTAAGCAGAATCTTTGTATGCTTCCTAGTGTTAACTAAAATAGAACACTAGGGACTTCAGTAAGTTGTTTTGTTTAAGTCCAACTCAGCAAGCTTTTCTCAAAGCCAAGTCTGCTTGAAGAGATGAATTATTCTGAGTTGGATGTTCATGCTCTTTGATGGGTAAAATGAAAATATTCAGTGTATTCTTGGAAAACAAGGTGGGTGGGTGGGTTTTAGTGTTTTCAGATTATAAAGACAGCACTTTCAGCACACATAAGAGTATTTTGCAAACCTCTTTTATACAGATTATGAGCTCTACTTTGTTTAAGTGTTAAAATGGAATGATGTAAATTTTAGGTGCAGTTGAACAAATATTGAGTGCCTACCATGCGAGATTTCCTCTTCACTAAGAATGAAATCACCACACCGTGTCTTCTGTTTGCAGTATGTGGACTTTACGTTTGAAAAAGAATTCTTATATTTAAATCTTTTTTTGTTGTTAGAGTTTATCATTGTATACTGTAACCCAGTTAATTTTTGCCTTCAGTTTTTTAGAATGAAAATATAACTTGAGTCCCATTTTTGAAAATAAAAGTCTGCTGAAATTATTTAAAAATTAGTTCTGGGGGGAATTGATTTTCAAGATTCAAATGTATAAAGACACATTGAACTTTTCAGCCTCATTTTTAATCAAGCTGATGTCAATGATGAGATACATACTTTTTGTATCTTGTTGCTGAAAATATTTTTTGCATTTCAGCACGTTGAGTTAAAATAAAGTTGTTACTACTTATTCAGAATTATTTGGTTTATTTTGTGTTTATTTGAAAAGTATGAATGATTCTTTTTCAGATTACTGTGATGTTTTACAAGAAGAGCTATGTATTTGATGTGGTAACCTTTAGAATTATGCATAGTAATTGTCTTTTCTACATAGGGAAGCTAGTGTTTTTTTGGAACCTACTAAAGACCTGTTCCTGGGGATATTGCATATGTGTGTATTTGCTTCCCTCGTGGCTCAGATGGTAAAGAATCTGCCTTCAATGCAGGAGACCAGGTTCAGTGCCTGGGTAGGGAAGATCCCCTGGAGAAAGGAATGGCAACCCACTCCAGTATTCTTGCCTCGAGAATTCCATGGACAGAAGAGCTTGGTGGGCTACAGTCCATGGGGTCACAAAGAGTCAGACACGACTGAGCGACTTTCACTTTTCACCACCTTTCTTGAGTGACTTAATGCTCATATTATGTAATTTAATGTAGCACTTAAATATTTCCTTTCCCTGGTCCTCCTACCCCTTTTTAATTGCAACTAATTATTTGCTGCTGTCAAAAAGAGCAACTTTTGGACAGCATATTACTGGGCCAACTTGGTAGCAGCAACATAATTAGTGCTTAAAAATTATGGCCAAGAACTTCTTAGCTATCCAGTGGTTAAGACTCTGCCTTCCAATACAGGGGGCGTGGCTTCTCTCCCTGGTGAGGAAACTAGGATCCCATATGCCACAAAATGTGGCAAAAAATTGACATACAAACATACATATATGGCCAAAGTGACAGAAATGTACAGTGAAAAGTCTATATACTCAACACACACATACACACACACTGAATTATCCTTAAAATAATAAAAGGGTTGAAACACTTAAATATTACCTATACAACTACAGTAAGATAGGACAAGT EMBV3_39545 AGGGGTGCGCCCAAGCGGGGCTCAGGCAAGGGGGCTGAGGGCCAGAAGCCAGGATTCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06511 CCCATATTGAACTCAACAACTACGTGAAAATAGTCAGCCTGCCCAAAGAGCCTGCCGCTG Gene GeneID:506919|TRYX3:NM_001040509:595_cdna Constitutive 0 NULL GeneID:506919 4 GENE TRYX3 MGC133774 trypsin X3 EMBV3_05471 TAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGTGATTGCCCC Gene BVV0102_457599 - 1 EMBV3_01990 GK000003.2:54735404-54759287 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00206812 TCONS_00066283 TCONS_00231338 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00220662 TCONS_00153678 TCONS_00129573 TCONS_00078473 TCONS_00175855 TCONS_00177370 TCONS_00218945 TCONS_00250930 TCONS_00175580 TCONS_00008224 TCONS_00166977 TCONS_00021569 TCONS_00137878 TCONS_00244654 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00189806 TCONS_00229819 TCONS_00185881 TCONS_00062744 TCONS_00109027 TCONS_00155780 TCONS_00000305 TCONS_00124585 TCONS_00251707 TCONS_00130084 TCONS_00037818 TCONS_00064462 TCONS_00039226 TCONS_00178325 TCONS_00161667 TCONS_00010054 TCONS_00065823 TCONS_00140840 TCONS_00209032 TCONS_00110323 TCONS_00130290 TCONS_00063486 TCONS_00020756 TCONS_00070839 TCONS_00010471 TCONS_00021595 TCONS_00088088 TCONS_00199424 TCONS_00155778 TCONS_00059708 TCONS_00071033 TCONS_00161835 TCONS_00198813 TCONS_00177281 TCONS_00170823 TCONS_00116665 TCONS_00249569 TCONS_00231612 TCONS_00070810 TCONS_00222114 TCONS_00131550 TCONS_00199037 TCONS_00110403 TCONS_00122479 TCONS_00152645 TCONS_00180345 TCONS_00218178 TCONS_00249639 TCONS_00210234 TCONS_00224113 TCONS_00229957 TCONS_00152736 TCONS_00250720 TCONS_00116100 TCONS_00010366 TCONS_00038381 TCONS_00242885 TCONS_00207069 TCONS_00175546 TCONS_00209846 TCONS_00023373 TCONS_00209711 TCONS_00116172 TCONS_00252107 TCONS_00009884 TCONS_00148280 TCONS_00056146 TCONS_00249011 TCONS_00176735 TCONS_00123620 TCONS_00031939 TCONS_00039951 TCONS_00131137 TCONS_00155779 TCONS_00063181 TCONS_00009259 TCONS_00234065 TCONS_00111497 TCONS_00207844 TCONS_00209636 TCONS_00007431 TCONS_00019961 TCONS_00245928 TCONS_00233372 TCONS_00244651 TCONS_00153218 TCONS_00240534 TCONS_00123168 TCONS_00085967 TCONS_00199802 TCONS_00250246 TCONS_00238327 TCONS_00040179 TCONS_00040740 TCONS_00200529 TCONS_00064619 TCONS_00244653 TCONS_00115148 TCONS_00250726 TCONS_00221884 TCONS_00142649 TCONS_00122313 TCONS_00020023 TCONS_00251907 TCONS_00218898 TCONS_00007359 TCONS_00218552 TCONS_00166449 TCONS_00031910 TCONS_00251929 131 XLOC_107421 XLOC_069855 XLOC_125332 XLOC_040997 XLOC_140827 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_133979 XLOC_093441 XLOC_078286 XLOC_047361 XLOC_105634 XLOC_107144 XLOC_132264 XLOC_153873 XLOC_105361 XLOC_003782 XLOC_101813 XLOC_012242 XLOC_084087 XLOC_150512 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_115843 XLOC_139313 XLOC_111934 XLOC_037471 XLOC_064932 XLOC_094822 XLOC_000084 XLOC_076129 XLOC_154648 XLOC_078795 XLOC_021647 XLOC_039186 XLOC_023044 XLOC_108098 XLOC_098554 XLOC_005606 XLOC_040542 XLOC_085269 XLOC_127543 XLOC_066227 XLOC_079001 XLOC_038213 XLOC_011431 XLOC_042616 XLOC_006022 XLOC_012268 XLOC_052875 XLOC_121077 XLOC_036490 XLOC_042806 XLOC_098720 XLOC_120466 XLOC_107055 XLOC_103665 XLOC_070831 XLOC_152512 XLOC_141100 XLOC_042587 XLOC_135423 XLOC_080255 XLOC_120690 XLOC_066307 XLOC_074034 XLOC_092410 XLOC_110113 XLOC_131641 XLOC_152582 XLOC_128744 XLOC_137409 XLOC_139451 XLOC_092501 XLOC_153663 XLOC_070269 XLOC_005917 XLOC_022206 XLOC_149548 XLOC_125588 XLOC_105327 XLOC_128357 XLOC_014040 XLOC_128222 XLOC_070341 XLOC_155048 XLOC_005437 XLOC_090162 XLOC_033949 XLOC_151954 XLOC_106509 XLOC_075172 XLOC_018184 XLOC_023768 XLOC_079842 XLOC_037908 XLOC_004815 XLOC_143544 XLOC_067397 XLOC_126359 XLOC_128147 XLOC_002992 XLOC_010639 XLOC_150855 XLOC_142854 XLOC_092983 XLOC_147198 XLOC_074722 XLOC_052005 XLOC_121454 XLOC_153189 XLOC_144994 XLOC_023996 XLOC_024554 XLOC_122181 XLOC_039343 XLOC_069449 XLOC_153669 XLOC_135195 XLOC_087074 XLOC_073868 XLOC_010701 XLOC_154848 XLOC_132217 XLOC_002920 XLOC_131872 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00218178 XLOC_131641 NonCoding NonCoding - 7:99213677-99241810 - TSS162275 5729 2 TCONS_00218178_2 157 0.905568161982894 3 0.796459547845869 0.000886771403701653 0.00102376193620026 0.000637427881539969 0.00060712227498956 0.000861658363640783 0.000240511398755287 0.0006507876490391 0.000334216051602831 0.000730185142003349 0.000214057065001311 4.3941352307135e-05 8.08315428101829e-05 0.000233250163478171 0.000763452724724909 0.000798732785629046 7.35735537230835e-05 3.13399592248213e-05 3.72164237701071e-05 0.000220143769383598 0.000283865233785678 0.000112882883633591 4.31142807595197e-05 6.58079553498174e-05 3.90706298563263e-05 0.000459456809083102 0.000383679264587045 0.000370165826075435 3.40174828754841e-05 6.31436507816371e-05 7.1976296098839e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 3e-131 475 97.51 0.0488741490661546 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-83 315 68.10 0.168964915342992 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 -0.0148602594801673 0.803029043356466 CTGCTCTAATTTTTAAGATTTCTTTCCTTCTACTAACCCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTATAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTAAGGTATGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGCCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGGTTTTTTCCTGTAATTGAGATCTAATCTTACTGCATTGTGGTCAGAAAAGATGCTTGGAATGATTTCTATTTTTTTTTAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGATGAAATGTCCTATAGATAGCAATTAGGTCTAACTGGTCTATTGTATCGTTTAAAGTTTGTGTTTCCTTGTTAATTTTCTGTTTAATTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGTGGCACTCCCGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGATCATCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAACACATGCAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCGTTGCCATTTACTTTATTGTTTTGGGTTTGAATTTATACACCCTTTTTGTGTTTCCTGTCCAGAGAATATCCTTTAGTATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGAAAAGCTTTTGATTTCTCCTTCATACTTGAATGAGATCCTTGCTGAGTACAATAATCTGGGCTGTAGGTTATTTTCTTTCACCATTTTAAGTATGTCTTGCCATTCCCTCCTGGCTTGAAAGGTTTTTATCGAAAGATCAGCTGTTATCCTTATGCGAATTCCCTTGTGTGTTATTTGTTGTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTTGTGTTTGATCTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCTCCTTGGGTTTATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCAACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACCCCTATGATTCGAATGTTGGAGCATTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTTTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCCTTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTCATTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTGATTTCAAGATTTTGGATCAATTTCACTATCATTATTCAGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGAGCATTTATCCTGTTCCTTTATCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTAAATTTCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCGCTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGGACGCTTGTGTTGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTAGAGTGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATTAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTCCAGTTATTGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATCGATAAAACATCTACGTTAAAGATGAAAAGTTTCTCTACCGTGAGGGTCACCCAGAGAGGTTCACCGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAATCACTTCCTCATGTGCACTCCACAACTGGACCTCTCAGAGATGTTCACGGAGTTATACAGAGAAGAGAAGAAGGAGGAAGGAGACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAACTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGAGTCCAAAGGGAGAGAGAGCAGTTAAGCCAGTAATCTCATTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTTTGGAATTTCAAAAATATGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAAAATGAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAATATAGGTACAAAATTGATAACTAATACCAAAAAGCAAAAGTTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTAAAAAAAAGAAGATGAAAAAGAAAGAGAGAAAAACAAAAAACAAAACCAATGTCACAAAAATTATAAAGAAAATACAGGTACAAAATTGATATCAAATACCTAAAAGCATAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGGGGAAAAAAAGTCACAGAAATTATAAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGCTAAAGAAAAGAAAAAAAAAAACAAGGTCAAAAAATTATAAAAATATATATATATATGAAGTTTGCTGAAGAAAAAAAAATAGGGTCTTTTTTTTGTGCAAAGTAATAGGTTATAAAAGTGAAAATTAAAGGAATAATAGAGGACTTAAATTTTTTTTTAATTAAAAAAGAAAGAAAGAAAAAATGATCATAAAAGTAGTAAAAATATATCGAGGACTTTCTCTGGTTTTGTTGTGAGTATTGTGGGTTCAGCTCATTTTTGGCTAATTCCTTGGTCCGATTTATATTTCTCGAGATCTATAGGCCCCTTCCTATGTAGTCGGTAGTAACCACAGGGTTTTAATCTATTGCCTGTAGCTTCCAAGGCAGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGGTTTCCACCCTGACACAAAGAGGATGGTGGAGGACACTTTTTTTTTTTTAGGCTCACTTGTTCAGTTGCGCAGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCACAGTGCCTCAGCCACACTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGTTCCGCCGGGAACCATCCATGGCCAGCCCTGGGCTGCCTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCCCTCGGGTAGTCCTCAGAGGCACAGACTCAGCTGGGCCTGCATTTTGTGCCCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTAAGCGAGCACGATTGCTGCGACTTATCACCTCCCCGCCACTTGGTTATCTAGGTGTACAACCGGCGCACCTTCTCAGGCAGATGTTAACCATCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGAGATTGCCCCCTTCCAGCTCTGGCTGCGTGTCACCCGAAGGGGAAGGTCTGCAGCCGGCTATCTCTGTTTAGTCCTTTGTTCTGTGCGTGGGCCTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGTGTGGTAGATATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCACTCAGATAGCGCTCAGGGTATTCAGGCCAGGTCCTTACTCTAAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCCGCTTGCTAACGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGCAATCTGCGAGTTTTAATTGTTTATTTATTTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTTGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGACTCCCTTCCCGGGACAGAACTCCATCCCTCCCTCTTTTGTCTCTTATTTTGTCTTTTATATTTTTTTCCTACCTCCTTTCGAAGACTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCTGGCATTCAGAAGTTGTTTTGTGGAATTTACTCAGCATTTAAATGCTTTTTTTGATGAATTTGTGGGGGAGAAAGTGTTCTCCCCATCCTACTCCTCCGCCATCTTGGCTTCTCCCCCTTTAACAGTTTTATTTCAAGCCAACACCTGAGGCAAATATAAGGGATAAGGGATGAGGTCTTAAAAGTTGATCATGTGCTGTAGTAGGTACATATGTTGCCTTCAGCCTACCTCCTTCTTTGGAAACAGCCTCTCCTGACCTTCTTTTTCTACATTATTGTTTCCAGCCTGTCTTCTTTCACAGTACTAATTGGACCAGGTGTGGATCACTGAGCCAAGAAATTCAATCAGTGTTCACCTGGAGAAACAGAACTGAAGGAAGCGGACCTGGACCTGGGGCACAGAGGTGTCAGCATGTTCAAACACAAGCAAGTCAAAGTTACTGTCAATAGGAGAACGATCTAATCTCTGTCCTGCCCATGCACTACCAACAATCCTAAACCTACTATATCTACCAGAACAAAGAGGAATCGGATACCAAGACGGTCTTAACGCTGGATCCACTGCTTTGATTTTAGCAACTTCGGGGAAGAACTTAACCCTGATTCCTCTCTCTAAAGAAAAAGAAAAAAAAGAAAATGAAGAAGAAAATCCTGACTT TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178422 TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178503 EMBV3_27986 ACAGCTACCGTGAGGTGGGCATCTTGCTGTTGTATCTGGCTGTGGGGGTATCCGTGTTCT Gene GeneID:521338|KCNS1:XM_002692470:532_cdna Constitutive 0 NULL GeneID:521338 13 GENE KCNS1 NULL potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1 EMBV3_28819 CATTGCAGACCAGAGTAAATAGACAGTCCTGATCAAATTTGCTGAGCAGTGCCACATTGC Gene GeneID:514273|AMIGO2:XM_002687319:126_cdna UTR3_Alt 1 NULL GeneID:514273 5 GENE AMIGO2 NULL adhesion molecule with Ig-like domain 2 EMBV3_21236 GCCCTTGAGTTGAAACCAAAGTCCTACGAAGCCTTTTATGCCAGGGCGAGAGCCAAGAGA Gene GeneID:507983|LOC507983:XM_002685349:219_cdna UTR3_Alt 2 NULL GeneID:507983 2 GENE LOC507983 NULL similar to KIAA1728 protein EMBV3_03543 TTCCCCAAGACTGGTAGGATGCAAGCTGAGGTAGTGTGGCCAAGATTGACAGACGCCATT Gene GeneID:539099|HMBOX1:XM_002689473:78_cdna Constitutive 0 NULL GeneID:539099 8 GENE HMBOX1 NULL homeobox containing 1 EMBV3_28563 CCACACCTGTGCTCATCTACTTTGTTGTGGCTGCACTTTCATCATCAGCTCATTGTCCCG Gene BVT0102_216621 - 1 EMBV3_43673 GK000008.2:99850893-100138373 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34493 CAGGAGAGCTGGCTGATTGTTTCCCTCAGTGTTGGTGCTTAAGATCAGTTGGTGTCATCA Gene BVV0102_154056 - 0 NULL GK000012.2:79825075-80056875 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22092 CTGGTAAAGAATTCGAGGCACGGAGATTGTGTAACTTGTCCAGAATCACGGCGGAGTAGG Gene BVT0102_221156 + 0 NULL GK000001.2:44712830-44747456 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007320 1 XLOC_002882 NonCoding TCONS_00007320 XLOC_002882 NonCoding NonCoding - 1:44719250-44720748 - TSS4397 1498 1 TCONS_00007320_3 116 0.373164218958611 1 0 0 0 1.23551293005414e-05 2.2173911878347e-05 0 0 3.8929961531771e-06 0 4.21369243387909e-05 2.19732775592309e-05 6.11264840196643e-06 7.16090944819933e-06 0.000114924650764089 3.47267234251911e-05 0.000350443007191634 0.000246837384180314 0 0 0 4.80068967625532e-06 0 0 0.000257217260390526 0.000302165808392322 0 0 1.56452717161135e-05 2.56479586664683e-05 3.88886830819867e-05 0 XM_617121.6 SLC9A4 PREDICTED: Bos taurus solute carrier family 9, subfamily A (NHE4, cation proton antiporter 4), member 4 (SLC9A4), mRNA. 1e-46 192 82.80 0.123497997329773 0 noncoding 0 0 0 0 -0.00255866650380761 0.985224980606861 0.0598577822501035 0.425548826116354 CATGAGTGACTTGAACTTTTATTTAAAAATACTTTCATCTTATTTTCCTTATAAATCAATACATAAGGGTGTTCTGTATCTGTCAAGTACAACACATTTTATAATAGAATGCTTACATCATGCATATCCTGACCCTAAACTACCAATTCCAGAATACAGGTGGCACTGAAGAAAGATTTGTCCGTAATCCCAGCTGTCAGACAGTCAATACTGATGTCCTCACAACAGGGCTATAAATAATAAACAGCAAACTGAAAAAAAAAAAAAACCCTCATCCTGAGGAAAAATCGATTTAACACTCTACCAAATTCCAAAAGGATTTTTGTTTTGGTTTCAGATGCCCAGACTGTCTGAGATTGTAGTGAAACAATTTTTTTTAACTTTTTATTTTATACTGGAGTACAGCCAATTAACAATGTTGGCGATAGTTTCAAGTGGGACTCAGCCATACATACTTGTGTATTCATTCTCCCCAGAGGGGCTTCTCAGGCGTCACAGTGGTGAAGAATCCACCTGCCAATGCAGGAGACGCAAGAAACTCGTATTTGATCCCTGGGTCCGGAAGAGGCCCTGGAGAAGGAAATGGCAACCTACTCCAGTCTCCTTGCCTGGAACATTCCATGGACAGAGAAGCCTGGCAGGTTACAGTCCCTGGCGTTTCAAAAAGCCTGAGAGGACTCAATGGTGAACACGCCCTCACCTCCGAACTCCCCTCCCAGCGGGGCTGCCATCTCACATTGAGCAGAGCTCCCTGCCCTACACAGCAGGTGCTTGCTGGTTGTGCGTTTAAAATATAGCAGCGTGCACATGTCCATTCCAAACTCCCTATCCCTTCCCTCCTGGCAAACATGTTAGTTCTCTAACTTCCTGCAAAGGAAGCTGATGCATGTCTTGGGTTCTTTAATGGAACTGTGCTTAAGAACTCAGGCTCTGAGCCAGTCTGCAATTTAAAGACGATTTCAGCACCTACTCCGCCGTGATTCTGGACAAGTTACACAATCTCCGTGCCTCGAATTCTTTACCAGTTAAACAGGCAGGGCACATTCATGATTCCACAAACATGACTGGAGACTTCCAGGCTGTCAGTCACTGTGCTAGACAGCAGCGAGACCACTCCGTGGAGGTCATATTCCAAAGCAGAAGTCGGACAACCATGCTAGTCTCAGAGTTAAAGCCTCCTAGCGCAGGAAGAAAAATGGATTAATTCCTGTCTAGAATTTAGTACAAACAGTAACCCATGACAGGGAATTCTCCGTAAAAGCTACCTATTATTTCATAACGTGCCCTTCTCCACTAAAAACTGGTAAAACTCTCGGGAAAGCAGGTTATTATGGAAGACCTCCCCGCCTAAGAAGACACCTCTGGGTCACACCCTCCTCCCCGGAGTAAATGCCCCTCACCAGCCTTCACCCACCCATCCACCCGCAAAGACGCGCGTCAGGAGGCTCTCTCTGCCAGAAAAGTCTGCCGACCTAGCAGAGTCGGTGCTGCAGGGTAA TCONS_00003200 . 3' 862 TCONS_00003200 . 3' 2359 EMBV3_15822 GGTGAACCACTTCTTCTGTGACATTCGCTCTGTCCTCAAATTGGCCTGTGGTGACATCTG Gene GeneID:787786|LOC787786:XM_002687130:493_cdna Constitutive 0 NULL GeneID:787786 4 GENE LOC787786 NULL similar to olfactory receptor OR7-15 EMBV3_20651 GTTATATTCTTCAGAGGACCAAAATACCCTGATGGAGGAGTCTGTGGAGCAGGCTCAGCG Gene GeneID:506315|LOC506315:XR_084593:8_cdna Constitutive 0 NULL GeneID:506315 16 PSEUDO LOC506315 NULL similar to dynamin 3 EMBV3_13024 GATGGTTCGAGACAACCCTCTCTATATCCGTTCTCATTCCAAAGCTGTGCTGAGAGCCTC Gene GeneID:790873|PIKFYVE:XM_002685545:145_cdna Constitutive 0 NULL GeneID:790873 2 GENE PIKFYVE PIP5K3 phosphoinositide kinase, FYVE finger containing EMBV3_40649 TCCTGGACTCTTTGCTACGCAGTTTGCTAGTGTTGCGGCTGTCCTTTTGTACTGACTTGG Gene GeneID:783355|LOC783355:XM_002698106:159_cdna Constitutive 0 NULL GeneID:783355 25 GENE LOC783355 NULL similar to odorant receptor family 7 subfamily D member 4 S84N EMBV3_38540 AAGAGATCAATCTCACCAGAGGACCGTCAGGTCAACGGCCAAGACCTAAAGAACCTGCTG Variant GeneID:525107|SYNJ2BP:NM_001035355:130_cdna 157^293 1 EMBV3_11759 GeneID:525107 10 GENE SYNJ2BP MGC127520 synaptojanin 2 binding protein EMBV3_09273 ATCTTCAAAATAACCTCATCGGAAAAATTGGCTGTGAAGGGCTGACAAAGCTTGACTTGA Variant GeneID:527979|LRRC6:NM_001075904:26_cdna 252^329 2 EMBV3_27905 GeneID:527979 14 GENE LRRC6 NULL leucine rich repeat containing 6 EMBV3_22187 TGTCTCAGAGTTTGGGCACCTTGCAGTCCCTAGGAATCAAAGAAAGGCCCTCGCACACTT Gene BVT0102_177057 + 0 NULL GK000013.2:52192980-52253038 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045441 1 XLOC_026436 Coding TCONS_00045441 XLOC_026436 Coding Coding ATRN 13:51999011-52195723 = TSS33163 11326 1 TCONS_00045441_16 1570 0.0676319971746424 29 0.942570573074205 0.000640284226693995 0.000464290734131184 0.000960976941509769 0.000713723595062163 0.000234525776775386 5.84996045980375e-05 0.000381459018653719 0.000248469874183452 0.000740727046706785 0.000232481975897425 1.11546280950976e-05 9.0127794580656e-05 0.0001271620155468 0.000124630754207866 0.000138938294110066 2.01899680024197e-05 1.95606871054656e-41 8.67556617966033e-06 0.000629728262886083 0.00121891228496099 0.000298170749471792 4.48384858194604e-05 3.18401733424448e-06 2.08869803593257e-05 0.00127284978217397 0.000691937015465886 0.000687247022898116 1.00675990350976e-05 1.76965094857945e-05 7.03379990531348e-105 XM_005214484.1 ATRN PREDICTED: Bos taurus attractin (ATRN), transcript variant X1, 0.0 1.072e+04 99.85 0.525604803107893 NM_139321.2 ATRN Homo sapiens attractin (ATRN), transcript variant 1, mRNA. 0.0 8731 84.71 0.686915062687621 TCONS_00045441_16 sp|O75882|ATRN_HUMAN ATRN_HUMAN Attractin; 0.0 2699 93.31 0.887261146496815 0 coding 0 0 0 0 -0.0648490504714203 0.738502217503584 0.0183604164690273 0.767745512973543 GCTGGACAATAAAAAAGGTTGCATGCTGAAGAATTGATGCTTTTGAACTGTGGTTTTGGAGAAGACTCTTGAGAGGTCCTTGGACAGCGAGGATATCAAGCCAGTCAATCTTAAAGGAAATCAACCCTGAATATTCATCGGAAGGACTGATGCTGAAGCTCCAATACTTTGGCCACCTAGTGCAAAGCGTTGACTCATTGAAAAATACCCTGATGCTGGGAAAGATTGAAGGCAAGAGGAGAAGGGGATGACAGAGGATGGGATGGTTGGATAGCATCGCCAACTTGATGGACATGAGTTTAAACAAACTCAGGGAGATGGTGAAGGACAGGAAAGCCTGGCATGCTGCAGTCCATGGGGTTGCAAAGAATCAGACACGGCTGAGCAACTGAACTGAAGTCTCAGAGTAGCTAGACTTCTTTTAAGGCAGCTGGATTTCCTGAGAGTATGTGCTCTGAGCTACTTAGGAGGAAACTGAAAAACTTCCTATGACCTAAAGTCAAATTCTCTGCCCATCACTTCTATCATAGTCTGTTGATTAAACAAATCACGAAGGCCATCCCAGATTCAAGGACTGGAGGATTAGTCCCCATCTTTCCACTGAAAGACTGTAAAAGAATTTGTAGCTATCTTTAATGCATCATACATAAAGTATAGCGGACTCTGACAACAGTATGGCTTCTTCCTCCTTAGAAAGAAAATATCAATACTTCCCTTCACAAGAAAATATTTTGTTTGTTTTTTAAGGACAATATAATCTGAGCATGTTTGAAGGCTAAGGAAAAAGAACTAGAGGAGGGAATAAATTAAGGAAGTAAGAAAAAGAATGTTTGTTGCAGCAAGGTTTGAGAGCTTTGAAGCGAAAATAGTCATACTGCTGTTGTATAGATGCAAGCCATTTCCTGTTAACCTCATGTGTTGGGAAAGTCATGTGAAACTTCTCACCCTGGGCTCAGTCTTGCTGTGGGGAGTGGTGGAATCGGCTGGTTCCATTTCTGGCCTGGAGGAACATTGCTTCCTGAAGCCAAGGCATGGCTGCATGTCAGCCTGACCCATGATAGGGCCACATATTCCATTTTCCTGTCTCATCCATATTTATCCCCATGTAGGACACTGTAGCAAAAACACAACCTACAAACCAGAATACCAGTGCTAGGGCCTAGGCTGAGCACCAGTTTCATGTAAGAATAGGAGGGATGCGTGGGTGGAGAGCGGGCTGTTGTACAGTTCAGCTTTTACCAGGCTTCAGGGGTATGCAGAATGAGGAAGGTCAGGACCTGGAGATATAAGGTACATCCTAGAATTTTAGAATTCTGTGCTCTATGAAGAGAAGCTTCAAAGTGTGCGAGGGCCTTTCTTTGCTTCCTAGGGACTGCAAGGTGCCCAAACTCTGAGACAGCTGCCATGGGAGTATCTGCCACAGCACAAGCCAATGTTCTGGTTATCTGTTGGTAAGTAACAAATTTCTCTAAAACTTGGGAGGCTTAAAACAGAAACCAGTGTATAATTTCTCAAGATTTTGGATAAGGCAAAGTAGGAAAGACTTGTCTCTGTTCTAGGTAATGTGGAAGCACCCAGGTGGCTGGAACAAGGGCTTCTTTCTTCATTGACTTGGTCCCGCAGCTGGGATGGATTTACCAGATTTTTGTGTCTGGGATCTAAGTTCCTGGTGTTAATTGGGCTCCTACTTTCCCTCCAAATGCTCTCTTTGTGGCACAGTGGAAAAGAAGCTGCAGCTCAGGACTATCAAGAGCTCAAAATCAGGATTGCTGCGTTGTTCTTAAGGCTCAGACCTGGAATGTGCCCATCATCACTTCGTCCACTTTCTTCTTGGTTAAATCCAGTCACAGGTCCGTCCAGATTCCAGGGTTGGGGACCACACAAGGTTATACTGCCAGCAGGCATGTTTCGTTGCGGATTACCAAAGTAACATACTACCTGACAAGAAGGGCTCTAGGAGCAGACCTGTGTGTTTAAAGCGGGCCGGGATGCAGAAAGGGGGAGGCTCCAGTTGCTAATTTTATGCTGCCCTTTCGATTGGAGGGCAAACAGTGGGGAACAAGGTAACCCCAAACTTCCTCTACCGAATTAAAGGTGCGGGGTCTGGTTTGCTACTGAATCAGGCTGTATCAAGGAAAGCCTTGCTGTGTGTCTTCAGTTCTAGGCATTCACTGACCATAGGTTCTTAACACACGTGTTGCTTCGTTAACACTGTATTACAAAGGTCAAAGCAGAGGCTCGCAGCACTCCTTCAGTACCACAGCTAGTACCACATCACGACTCAGACTCCTAGGTCCCTTCTGCCCCGCAGCGAAACTTGGGGTAGAGTGATGATTGGAGCCAGGGTCCCTGGACAGCAGCGCTCAACTCGGCCGGCTTGGCTTAAGAAGCGACTGGCTCCGGGCAACCAACGGGAACAGGGTGCTTCAGAACTGCTACCCAGGCGCGGCCGTGCGAAGCGAATGAATAGAACTACACCGCGAGAGCTCCTGGACACCAAGGTCGAGGGAGGCAGGGAGAACTCCCTAAGCCCTACACGTCGCGTTACAGAGCCGCCTTCAGGGAAGCGCGTTCCAGATGACGCTAGTCCGCGCGCTCCGCCCACGCACGCACGCACGCCCTGGCCCCGCCTCTCGCGCCGCTCTGGCCCCGCCCTCAGGATTGACCGCCCGAGCCACCGTCCGCACAGTCCCGCCCCGCACGGCCAGGCGAAGCTGAGCCGGCCGTGCGGTGTGTGTGTGTGTGTGTGTGTGTGGGTATATGTGTTCACGGGACACCGTCTCAGCCCCGGGAAGATGGTGGCGGCGGCGACTGAGGCGAGGCTGAGGAGGACCGTGGTGACACCGGCGCCCACGAGCAGGAACGGCAGGCGGTGTCGGGACTGGGACGCGACTAGAGCTGGAAGGCCGGGGCTGCGGACCGGGCTGCGCCTCCCACGGCGGTGGCGGCGCCTGCTGCTGCTGCTGCTCCCGCCGCTGCTGCTACTTCCCTGGGCGGCTGAGGCCGCGGCGGCAGCGGCGTCGGTGTCGGGCTCAGCCGCAGCCGAGGCCAAGGAATGTGACCGGCCCTGTGTCAACGGCGGCCGCTGCAACCCTGGCACCGGCCAGTGTGTCTGCCCCGCCGGCTGGGTGGGCGAGCAATGCCAGCACTGCGGGGGCCGCTTCAGACTAACTGGATCTTCTGGATTTATAACAGATGGACCTGGAAATTATAAATATAAAACAAAATGCACATGGCTCATTGAAGGACAGCCAAATAGAATAATGAGACTTCGTTTCAATCATTTTGCTACAGAGTGTAGTTGGGACCATTTATATGTTTATGACGGGGACTCAATTTATGCACCCCTAGTTGCTGCCTTTAGCGGCCTCATTGTTCCTGAGAGAGACGGCAATGAGACTGTCCCAGAGGTTGTCGCCACATCAGGTTATGCCCTGCTGCATTTTTTTAGTGATGCTGCTTATAACTTGACTGGATTTAATATCACTTACAATTTTGACATGTGTCCAAATAATTGCTCAGGCCGAGGAGAATGTAAGATCAGTAATAGCAGCAACACTGTTCAATGTGAATGTTCTGAAAACTGGAAAGGTGAAGCATGTGACATTCCTCACTGTGTAAATAACTGTGGTTTTCCTCATCGAGGCATCTGCAATTCAAGTGATGTCAGAGGATGCTCCTGCTTCTCAGAGTGGCAAGGTCCTGGATGTTCAGTTCCTGTACCAGCTAACCAGTCATTTTGGACACGAGAGGAATATTCTGACCTAAAGCTCCCCAGAGCCTCTCACAAAGCTGTGGTCAATGGAAATATAATGTGGGTTGTTGGCGGATATATGTTCAACCACTCAGATTACAACATGGTTCTAGCGTATGACCTTGCTTCTAGGGAGTGGCTTGCACTGAACCGTTCTGTGAACAGTGTGGTTGTTAGATATGGCCATTCTTTAGCATTATACCAGGATAAAATTTACATGTATGGAGGAAAAATTGATTCAACAGGGAATGTGACCAATGAGTTGAGAGTGTTTCATATTCATAATGAATCATGGGTGTTGTTGTCCCCCAAAGCAAAGGAGCAGTATGCAGTGGTTGGGCACTCGGCGCACATTGTCACGTTGAAAAATGGCCGAGTGGTCATGCTGGTTATCTTTGGTCACTGCCCTCTCTATGGATATATAAGCAGTGTGCAGGAATATGACTTGGATAAGAACACATGGAGTATATTACACACTCAGGGTGCCCTTGTCCAAGGCGGCTACGGCCATAGCAGTGTCTATGATGATAGGACCAAGGCCCTGTATATTCACGGAGGCTACAAGGCTTTCAGTGCCAATAAATACCGGCTTGCAGATGATCTCTACAGATATGATGTGGACACCCAGATGTGGACCATTCTTAAGGACAGCCGATTTTTCCGTTACTTGCACACAGCTGTGATAGTGAGTGGAACCATGCTGGTGTTTGGAGGAAACACACACAATGACACGTCCATGAGCCATGGGGCCAAATGCTTCTCTTCAGATTTCATGGCTTATGACATTGATTGTGACCGATGGTCAGTGCTTCCCAGACCTGATCTCCACCATGATGTCAACAGATTTGGCCACTCAGCGGTCTTATACAACAGAACCATGTATGTATTTGGTGGTTTTAATAGTCTCCTCCTCAGTGACATCCTAGTATTCACATCGGAACAGTGTGAAGCACACCAGAGTGAAGCTGCTTGTCTCGCAGCAGGACCTGGTGTTCGGTGTATGTGGGACACAGGGTCATCTCAGTGTGTCTCCTGGGAGCTGGCACCTGAAGCACAAGAAAAGATAAAGTCAGAATGTTTTTCTAAAAGAATTTTTGACCATGACAGATGTGACCAGCTCACGGATTGTTACAGCTGCACAGCCAACACCAATGGCTGCCAGTGGTGCAATGACCATTGTGTCCCTACGAACCACAGCTGCACAGAAGGCCAGATCTCCATTTTCAAGTATGATCATTGCCCCAAGGATAACCCGATGTATTATTGTAACAAGAAGACCAGCTGCAGGAGCTGTGCCCTGGACCAGAACTGCCAGTGGGAGCCCCGGAATCAGGAGTGCATCGCCCTGCCCGAAAATATCTGTGGCATTGGCTGGCATTTGGTTGGAAACTCATGTTTGAAAATTACTACTGCCAGGGAGACTTATGACAATGCAAAATTGTCCTGCAGAAACCACAATGCCTTTTTGGCTTCTCTTACAACTCAGAAGAAGGTAGAATTTGTCCTTAAGCAGCTGCGAATCATGCAGTCATCACAGAGCATGTCCAAGTTCACCTTAACCCCATGGGTTGGCCTTCGGAAGATCAATGTGTCCTATTGGTGCTGGGAAGATATGTCCCCGTTCACAAATAGTTCACTACAGTGGATGCCATCTGAGCCCAGTGATGCTGGATTCTGTGGGATCTTGTCAGAACCCAGTACTCGGGGCTTAAAGGCTGCAACCTGCATCAATCCACTCAATGGTAGTGTCTGTGAAAGGCCTGCTAACCACAGTGCCAAGCAGTGTCGGACCCCTTGTGCCTTGCGGACAGCCTGTGGGGAGTGTACCAGCGGCAGCTCGGAGTGCATGTGGTGCAGCAACATGAAGCAGTGCGTGGACTCCAATGCCTACGTGGCCTCCTTCCCTTTTGGCCAGTGTATGGAGTGGTATACCATGAGCAGCTGCCCCCCTGAAAATTGTTCAGGCTACTGTACCTGTAGTCACTGCTTGGAGCAACCAGGCTGTGGCTGGTGCACTGATCCTAGCAATACGGGCAAAGGGAAATGCATAGAGGGCTCCTATAAAGGACCAGTGAAGATGCCTTCTCAGGGCCCTACAGGAAATTCCTACCCACAGCCTCTTCTCAATTCCAGCATGTGTCTGGAGGACAGCAGATATAACTGGTCTTTCATTCATTGTCCAGCTTGCCAGTGCAATGGCCACAGCAAATGCATTAATCAGAGTATCTGTGAGAAGTGTGAGAACCTGACCACGGGCAAGCACTGTGAGACCTGCATATCTGGCTTCTATGGTGATCCAACCAACGGGGGAAAATGTCAACCATGCAGGTGCAATGGACATGCGTCGCTATGCAATACCAACACGGGCAAGTGCTTCTGCACCACCAAGGGCGTCAAGGGGGATGAATGTCAGCTATGTGAGGTAGAAAATCGATACCAAGGAAACCCTCTCAAAGGAACGTGTTATTATACTCTTCTTATTGACTATCAGTTCACCTTTAGCCTATCCCAGGAAGATGACCGCTATTACACAGCCATCAATTTTGTGGCGACACCTGATGAACAAAACAGGGATTTGGACATGTTCATCAATGCCTCCAAAAACTTCAACCTCAACATCACCTGGGCTGCCAGCTTCTCAGCTGGAACCCAAGCTGGAGAAGAGATGCCTGTTGTTTCAAAAACCAACATTAAGGAGTACAAAGATAGTTTCTCTAATGAGAAGTTTGATTTTCGCAACCACCCAAATATCACTTTCTTTGTTTATGTCAGTAATTTCACCTGGCCCATCAAAATTCAGATTGCATTCTCCCAGCACAGCAATTTTATGGACCTAGTACAGTTCTTCGTGACCTTCTTCAGTTGTTTCCTCTCTCTGCTCCTGGTGGCTGCTGTGGTTTGGAAGATCAAACAAAGTTGTTGGGCTTCCAGACGTAGAGAGCAACTTCTTCGAGAGATGCAGCAGATGGCCAGTCGTCCCTTTGCCTCTGTAAATGTCGCCTTGGAAACAGATGAAGAGCCTCCTGATCTTATTGGGGGGAGTATAAAGACTGTTCCCAAGCCCATTGCCCTGGAGCCGTGTTTTGGCAACAAAGCTGCTGTCCTCTCTGTGTTTGTGAGGCTCCCTCGAGGCCTCGGTGGAATCCCTCCTCCTGGGCAGTCCGGGCTCGCAGTGGCCAGTGCCCTGGTGGACATTTCTCAGCAGATGCCAGTCGTCTACAAAGAGAAGTCAGGAGCAGTGAGAAACCGAAAACAGCAGCCCCCTGCGCAGCCTGGGACCTGCATTTGATGCTGGGGCCGGGACTCCCTGTGAGCAAGGAGTGGCGTGCCAGAGCCGTCTGCCAGGAGGGAGCAGGCAGGGAGAAGATGCTATGCGGGGCTGAAGACTGGAAACCCTCGAATCATCCACCTCCTCTGCATGTTCACAAGCTTTCTTTGACAGTTTCTCCCATCTGTACTCCAGCATCTAACCTTTTACTTTCGTATAGGAAATAATTGATTTCGTTACAGGTCTGGGGTGATCCAGTTGTTGCTGGAGGAGGCCGGTGTAGAGCGAGTGAGAGAGCTAGGAATGACACTCAGGTTCACTTGTGGAAAACTGTCCTTGGGACTGTCTCAACTGTGCAAAAAACAAAGATGTAGTGTTTACAAGTAGACATTTATCATCAGTCATTCTTGAATGTGGTCTTTTAAAAACTAGTCAGATGAATTAACTTTTCATCTGAAGCCTGCTATCTTTTTTAAAAGATGTGCTATTTATTCTTGCACGATTTAGGCAAATATCTCTCTTCCAGGGAGTAACTTTTTTTCTAGTTGAGAATTAATAATGGTCCATCTCTTTTGAATCATAAGATAGAAGGGGGCTATTTTAAATGTCAAGGTCAGCAGTGTTACTTGGAATGTAAACTGATGTAATATGTAGTTTTCTGTAGCAACGTGATTAATTTAGTCTTAATCCATTTAAGGTTCTCTCTCTCTCCCTCCCTATCCTTCTCTTTCCTCTTTACCTCTCTCTGTCTCTCTGTCTCTGCCACTCACGCTCTCTCTCTCTCACACACACACACTAAGTGCCTAGACTTTAAATAGATCTAGCAATTGGAAAGTTAGTAAGCATAAGTTTTTACATAATTGCATTCCTACATTCTTAGAAAACTTAAACAGCTATCATTGGCAATCTGCTCTTTTATAAAATCTAATTTGCAGCCAGGAAGGTTTTCTCACCCCAAGAAACATTTAATGTAGCAGGGATTGAGAGGAAAGCAGAAAGGACCTAACTGTGAATGCTCCTGTTTTTCAAAAAGGACACTAGGCATGTTCCCATGTGCCTCCCTGCCCCAGACTTGGCCTAATGTTTGCTTCAGCCCCTCTGGCCACTCCTGCCCAGGCACTGCAGAGGGAGGGGCTTGCTCATGTTACATGTCTCCCTTGAGCTGAAAAGAGCATGACAGCACTTGGGACTCCTTGATCAAAGAACAGCATTTGTTTCTGTAGCCTGTGTAAGGTGGTGGGTCATTCTTCATTCCCAGGCTGCAGGTGGAGTGCCAGGAGAGGCTCGGTCTCCTGTTGTCAGGCAGAACCTGCCCAAAGCCTGGAGAGCAGCCTGGAGCTGTTGGTCCTCTTTCCCCCAGGAGGGACCCAGGCCTCCCATGCTCCCTCCTAGATTCAAGGGGTGGCTGTGGGGAGGGCAGTGAGTACTGATAAGGATGAAAAGCATGAGAAAAATGGACAAGGAGAGAAAACCATGCCAAATGAAGTGACCAAATTGAAGTCGTGACCAAATTGAAGTGGGGTAGGGCAGTCCCTGCTCGTCTCCCCAGGCCACTGCCGGGATGTCGTGTTGTCCTGTCCGTGGTGCTCTGTATTCTGGCATTATGCAGCAGCCTCCCAGGACCTCTCTTCTGCTTCAAAACCCAGGAGTTCTCTAGCATTACCCTGGGGGGAAGGGGGGGTAATGTGCAGTGTGCAGAGGCTCAGGAAGGGTAGACCTTTAGACAACAATGCTCAAGTTTGTGAATTTGGAGAAATTAATACTCAAAAGAGCAAAACTGTGGCATTTCACCTTTATGTGGAGTACCTAGAGAGAGGGAGTATTATCTCTTCCCCAACACTAACCCCTCCCATGAAGAATTGCCTGGAAAGATGTTTTCAAGGATGTCGAACCATAAAACACTGTCTGATGCACAAAACACCTCTACTTTGAGACTTGCCTCTCAAAATGCTGCTTTTTCACAACATTGTTAAAGAGCAGACGGTTCTAGAGAAGATCCCTCCTCTTAGAAGCTCCCTACATCTCTGCTCCAGATCACGGTATCCCCAGAGAGCCTGCCATGGACTGGCCCTTCACCCTGTAATTACCACGAGGCCATTGGAGAGGACCCTCCCACAAAGGAAGTCCTTGTTTGTTCAAAGGACTAGTGTTTGCTTGGCAAAGAAGCCTCCTCCCCATGGTAGTTCCATGCCTTGAAATAATAAGCACCGTGTCCCATAGCCACCTGGTTTTCTTTTTTTCTAAAAGATAATGTTTATTTTTTAAAAGGACGGAAGGAGCAAGTGAAGTTTAATTCTGCTCCGACAGTAGAGAAACAGCTGAATCCAGCTGCTTCTCCTTTGCAGCCAGTAGCAAACAGCTTTCTGCAGGCTTGGGCCAGAAGAAGGGGGTGGCAGGAGAAAGAGGCGCTCAGCTTAGAGCCAGTTACTGAGAGGAAGTCATCTGGAACTTCAGAGCCTGTATGTAAATTAAAATAGTTATGAAAACATAGATATTGCACTTGTACATAACTATACAATAGTGTCCGAATGTTTGGACAGTCAGAGTGTACATAAAACAAAAATATCTTTATGTATTTTTATTAAACATAACGGTGTCCAAGTTTGACCTAATGTGTTTTTGTGCCATATAATGGATATCCAGGCTCAGAGAAGTCCTCGTACAGTGATGATAAAGCCGAGACAGGCATCCCCGTTGTGCCCATGTGTTCAAATGCATCTGGGGCCAGTTGGATAACTTTTAAAGCAGGACTCGTCTGTCAGTGCACGTATGAAAGTGTGGGCAGCGTGTGAAGAGGCTCGCTGGCAGCTGCAGTGTCTTTGTCACTGTCATCAGCTCTGACGTGCATCGTAAATCTTCCTGTCGGCCTCTTGGTGCTGTGGGTAGCCGGGAGTAGACCAGTCTCGTCCTGAGAAACGCTTCTCTTAGACTTAAGATACAAAGACTACACCGTAGATCTAGTCAGATTTTCCAAAAGGGGGTTTTTCAGGCTGCATTTTGTTGTGATTTTGTGTAAATTTTTGATGACCATTTCCTAGGACCATAGTTAACTATACTGCAAACTGGGGGTGGGAGTGGGCAGCTGCTTTGTTGATAATTAGCTCCTCCTGTTTCCCCATGGAGAACCTCACCCTTGCCTCCTGCCCCCTTCCCATACTGTTTGGGGAGAAGTCTTTGTTTCCTGTGAGGATCACCTCTAAATGTGGGAGGAGGTGTGGAGAGAAAGCAACCATATGCTGCCTGAACTAACCTGGAAGAAAAGCAGCCCTGGACAGACTCTGTCAGCATAGGGAAAATACTGGAATATCAGTGGTAAGGCCTGAGGTAACAAGATTGGAGATGCACCAGGAAGTCTGAGGCAAATGGAAAGACCAAAGCGGTATTTTAGAAAAAGACACTTTACCTTTCAGTGCAAATCTTGCTCCTTCAACTTAGTAGAGTGTATTTAGAGATGGGGTGGGAATGATTCAACTATTCACTAAGTACTTCACTGACAACCTAAGCTAACACTGGGGCAGTGACAGATGGAAAAGCAGCTCTTGAGAATTACAGCAGAATCCAGCTCCTCAAACCTGTCATCCCAGGAGACCTTTCCTTGCAGTGGTTTCTGTGAGAATTGGCCCCCTGAGGACAGACCCAGGAAGGCGGAGGGTCTAGCCTTGGACCGTGCACCGGCTCTCAGCCTGAAATGTTTACTCAGTTTACCAAATGGCTCAAACCATAAAAATCACCGTGATGGTTTGTAGATAGCCAAGCCCACCAAGGGATGTTTCCCCTGAGTTGTCCAAATTCATGAACACCCTTCACCTGCAGGGAGGTGATCTGTTGGAGAGGAGAGGAAAACTGGCGCCTTCTCTTTTAAAGGCAATAATGGAATTGACTTTCAATAACTGAATTTGTGCACAAAACATTCTAAACACTAGTGAAGCCTGTTTTGTTGAACTAATTCTGGCTCTGGAAATGTTTTATAGTTATTTACAGTTTTGTTTTGTTCGGGGAGTTTTTGGTTTGGATTCAAGCTTAGTTTGTTAATATGTATAATTTAGCATATATTGCACTCATGTAAATATGGAGTAAGTATTGTAAACTATTTCATTGCTGGGGATTGTGGGTGTTATACATACATTTAGGACTGCAATTTTTTGGTATTTTTTGTATTGTAAAATAACAGCTAATTTAAGCAGGAACAAGAGAACTAGGGGAGGTCTGTGCATTTTAAAAATAAATGTGAAGAACTTGTATATAAACAAGTAAATACTATAATATGAACTTCCTTCTGAAATAAAAGTAGATCTGATAAAAAT EMBV3_38058 GTTGAGATTTGCTTTGTGGCCTAGCATGTGATCTACCCTAGAGAACTCATCCACGTGCAC Gene BVV0101_043215 + 0 NULL GK000016.2:24433701-24795632 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071777 1 XLOC_043547 NonCoding TCONS_00071777 XLOC_043547 NonCoding NonCoding - 16:24745358-24746422 - TSS53621 1064 3 TCONS_00071777_1 45 0.99906015037594 1 0 1.27873104425264e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000148937789187274 0.000468109107740623 0.00113192020369264 0 0 0 0 0.000120711102985815 9.45375020107188e-05 0 0 0 0 9.12518685118924e-06 9.60603891319166e-05 XM_005216780.1 KCTD3 PREDICTED: Bos taurus potassium channel tetramerization domain containing 3 (KCTD3), transcript variant X1, mRNA. 6e-36 156 71.65 0.298872180451128 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-47 194 65.83 0.93984962406015 0 noncoding CCTCTCTTATTTCTTATTATGTTTACTTGGGTCCCCTATCTTTCATTCTTGATTAGCCTGGCTAAAGGTTTATCAATTTTGTTTATCTTTTCAAAAAATCAACTCTTGGTTTCACTGATGTTTCCTGGTTGTTTTTTTTTTTTAACCTCTACCTAACTTTTTTTCCTCTTTGATTTATTATTGCCTCCTTTCTGCTGACTTTGGGTTTTGTTTAATTCTTCTTTTTCTAATTCTTTTAGGTAGGAGTTTAGGTCATTTGGGATTTTTTTCTTGTTTTTTTTTAGGAAGACCTATATCACTATAAATTTCCCTCTTAGAATTGCTTTTGCTGTATCCCACAGATTTGGAGTGCTGTGTCTTCAAGTCAAGTCATTTATCTTGAGATATTTCTGACTTCCTTCCTGATTTCTTTTTTACCTTTTTAGTAACATGCTGTTCAGTCTCCATGTGTTTGTGCTTCTCTCATTTTCCTTTAACTGCAATTGATTTGTGGTTTCATCCTGCTGTGGTTGGAAAAAATGCTTCATCTAATTTCTATCCTCTTAAATTTGTTGAGATTTGCTTTGTGGCCTAGCATGTGATCTACCCTAGAGAACTCATCCATGTGCACTTGAAAAGAATTTATATTCTGCTGATTTGGGATGTTATATCCTACAGATATCTATCAAGTCCAACTGGTCCACTGTATCATTTAAGATCACCGTTTCCTACCAGTTTTCTGCCTGGATGATCTCTCCCTTGGTGTAAGTGGGATGTCGAAGTCTCACTATTATTGTATTATTGTCAGCTTTTCCTTTTATGTCTGTTAGTATTTGCTTTATATATTTAGGTGCTTATGTACTGGGTGCATATATGTTAGTAAGTGTAATATCCTCTTCTTGTATTGACTCCTTTATCATTATATAAAGGCCTTCTCTGTCTTTTGTTATAGCCTTTTTTTTAAAAGTCTATTTTGTCTGATACGAGCATTGCTATCCCTGCTTTCTTGTCAATTCTATTTGCATGAAATAACATTTTTCATCCCATCACTTTCAGCCTGTATATGTATTTGGCCTAAAGTAGAT TCONS_00066846 . 5' 50616 TCONS_00066846 . 5' 50616 EMBV3_20847 CTTTGCCTGCACCGAGTGTGGTCAGGACTTTGCCCAGGAAGCAGGGCTGCATCAACACTA Gene GeneID:616814|ZNF576:NM_001076433:397_cdna Constitutive 0 NULL GeneID:616814 18 GENE ZNF576 NULL zinc finger protein 576 EMBV3_32007 ACTTAGCTGCTCTATGTTGTGCTACAATGATGGTTTCATGCCCCTACCCCTACCCCTACG Gene GeneID:784732|PASD1:XM_002699669:36_cdna Constitutive 0 NULL GeneID:784732 X GENE PASD1 NULL PAS domain containing 1 EMBV3_41862 TATGCGGCAGCACGATACCAGGAATGGCAGGGATTTGAAGCTGGATGGAGGGAGACAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24735 CCATCCTCTTTCACTTCCTCTTCCAGGTTTACTGTTTCACACGACCTGGTGGGGCTGGAT Gene GeneID:518021|ACER1:NM_001103254:57_cdna Constitutive 0 NULL GeneID:518021 7 GENE ACER1 ASAH3 MGC151717 alkaline ceramidase 1 EMBV3_02547 CTACCTGGAGTACTCCCTTCTTGCAGAGTTTGTGGTTTGGAGTAATATTCATCCGGCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02053 ACATTGTCAGCTTCCTTGACAAACTGATCCGCAATCCCAGTGCCCTTCACACCCTGGTAG Gene GeneID:100336601|LOC100336601:XM_002684679:44_cdna Constitutive 0 NULL GeneID:100336601 1 GENE LOC100336601 NULL hCG1811380-like EMBV3_26983 CCCCTCTTACCAACGCCATGGCAATTCCAGCTGGTCACCTGACTTTTGAATGCCGCAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29215 GAGGAGATGATAGTCAAAAACTGCCCTAACATGGGAAAGGAACTAGCCACCCATTTCCAG Gene BVV0102_123679 + 0 NULL GK000008.2:87578643-87891325 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02673 ACCTGCCTGTCACCATGGCCACAGGAAGAGTCTTGCTAGGCTCTCTGCTTCTCCTGATCC Gene GeneID:518266|PSPN:XM_002688913:210_cdna Constitutive 0 NULL GeneID:518266 7 GENE PSPN NULL persephin EMBV3_13757 CTGCTGCTGCTCTTTCCGCTCACGGCGCAGCATGAGAACTTCAGGAAAAAACAAATTGAA Variant GeneID:514394|UCHL1:NM_001046172:26_cdna 223^309 2 EMBV3_15133 GeneID:514394 6 GENE UCHL1 MGC133697 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) EMBV3_39139 CTTACAGTCAAGACAAAAAGGGGGTGATGTTGCAGCCTGGCGGAGCAGAGACCAGAACCT Gene BVT0101_077238 + 0 NULL GK000018.2:61951471-62018418 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087476 1 XLOC_052500 NonCoding TCONS_00087476 XLOC_052500 NonCoding NonCoding - 18:61955146-61963992 - TSS64955 328 2 TCONS_00087476_1 57 2 0.963143018654607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000822191762315338 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.00205805017294468 0.988877861309625 0.0100403683300831 0.826574436544648 GCTGTGCTGGACGCGGCAGGTGGCGCTGGAACAGGGACTTGAAGTCGGGAAGGATTCCTCCCGAGGGAAACACTGAACGTGAAGACAGCGAGCGTCTGCAGATTCAGCCTCAGATCAAGGAGATAGTCCCCTGAGACTCATCGTTATTGACCACGATGGCCCTGCAGTCAAGACAAAAAGGGGGTGATGTTGCAGCCTGGCGGAGCAGAGACCAGAACCTGCCCCATGACTGGAGGGTGCAGCATATCGCACCCTGTGATTGTCCTAGTGAGCGAGCCGAAGGGACATACTCTCTGCTCCGCTTCACTGCCTGCCCCTGCCTCCGTCT TCONS_00084661 r 3' 3677 TCONS_00084661 r 3' 3910 EMBV3_21022 CCGGTGAGGGGATGGACATCAACGAGTTTACTGAAGCTGAGAGTAACATCCAGGATTTGG Gene GeneID:541271|TUBB1:NM_001144100:1258_cdna Constitutive 0 NULL GeneID:541271 13 GENE TUBB1 NULL tubulin, beta 1 EMBV3_30193 ATATATTGTGAATTTCTTTGAAAGCGAGGAGCCCCCCAACGCTGCACTGCCCGCAGGAGT Gene GeneID:100297493|LOC100297493:XM_002696455:62_cdna Constitutive 0 NULL GeneID:100297493 20 GENE LOC100297493 NULL similar to odorant binding protein I f EMBV3_24167 CAGGGCAGTTTCTCTTTGAGGCGTGAGCTTGTCCTGCTGAGTATGTTTATAGGTCACAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08328 CCGAGATATGTTGTGGGTTGTCGTCGACAGATATTTGCCAAGAGAAGTGGATCCATTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38386 CCAAAGAAATTTCAAAATACGGTCAATTGGGAACTGAAGTCAAAGCAATAACGTACTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37801 ACATCCTAAGAGAGCCACAACATGCCTAATAAGATCACAGCTCTTCTCCAAGCTCCCCCG Gene GeneID:100337120|LOC100337120:XM_002688037:14_cdna Constitutive 0 NULL GeneID:100337120 6 GENE LOC100337120 NULL T-cell activation Rho GTPase-activating protein-like EMBV3_36396 TAGTCTTCAGGAAGGTGCTCGGCTTGGGGAAAGCAAACCCTCACCCTGTCCCTTTTCAAT Gene GeneID:781811|HESX1:XM_002697000:384_cdna Constitutive 1 NULL GeneID:781811 22 GENE HESX1 NULL HESX homeobox 1 EMBV3_19294 TGCAGGTGGAGACCATCTCTCCCGGAGACGGGATGCTTGAAGATGGAAAGAAATTCGATT Variant GeneID:614795|FKBP1A:NM_001035456:1279_cdna 152^199 2 EMBV3_25290 GeneID:614795 13 GENE FKBP1A FKBP1B FK506 binding protein 1A, 12kDa EMBV3_05307 GGGGATGGTTGACTGGGCAAGAAACTCAGAAGACAGGGTGGTCATTCCAAAAAGCATCTT Gene GeneID:533925|BAI3:XM_002689998:8_cdna Constitutive 0 NULL GeneID:533925 9 GENE BAI3 NULL brain-specific angiogenesis inhibitor 3 EMBV3_02873 CAAACATATGCTAAGCCACACCTGTCGTCTGAAACAGAAGTGTTGAAACAGAAGGACTGG Gene BVV0102_040770 + 0 NULL GK000028.2:35378319-35425156 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13281 TTCCCTCCTGAGTGATACGCCTTGGCTTCTAGACTTCCAATGAATTCTGAGCTCTGCCAG Gene GeneID:504511|LOC504511:XM_002690132:177_cdna Constitutive 0 NULL GeneID:504511 9 GENE LOC504511 NULL hypothetical LOC504511 EMBV3_33304 TCTGCTGCGGGCAGCGTCTTGGCCCCTAGGTGGGCTCTCTTCAGCCCGTGCCAGTATTAA Gene GeneID:531927|FARP1:XM_002691965:15_cdna Constitutive 3 NULL GeneID:531927 12 GENE FARP1 NULL FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) EMBV3_20183 GTGGGTCAATTACATATCCACATGCCAAAAAAGAGGAAGTTATATCCTTACTTCATACCA Gene BVV0102_430797 + 1 EMBV3_06121 GK000009.2:87001717-87158384 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15864 CTGCGGGTCCTGCTCGTCCAGGTGGATGTGGTGACTGAATGTCTGACCACCGTCAAGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17176 GAGCACTGGAACTGAATAGCCCAGACCTCTGACCTTGACCCCTGATCTCTCATCCCTAAT Gene GeneID:536942|PCNXL3:XM_002699346:225_cdna Constitutive 0 NULL GeneID:536942 29 GENE PCNXL3 NULL pecanex-like 3 (Drosophila) EMBV3_28634 ACTAGAAACTCGGTTCCTTGAGAGAGAAGTGTCAAAAGTTATGTGCATGATCTCCACAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11956 CCACCTTCGTTACTTGTTTGCTGGTTTCCTGGCGATCTGCCTTGCCCCAATATAATGAGC Gene BVT0102_208540 + 0 NULL GK000005.2:111262445-111293865 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26787 TGCCCGCCAGAAGTATGTCCGGAAAGCCTGGAAGAAAGCCAAGATGACAGACTTTGATCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41979 GTGGGTTATAATTCATCTATACAGATCAAGAACTTGAATGGAAGCTAGCAGAAGTTGGAG Variant GeneID:531753|PDCL2:NM_001040551:107_cdna 499^707 1 EMBV3_00224 GeneID:531753 6 GENE PDCL2 MGC133928 phosducin-like 2 EMBV3_15999 GTTTATATTTACTGAGCTCCTAAAGAAAATGGTAGAAACTCATATAAAGTTCTGTTTAGG Gene BVV0102_155805 + 0 NULL GK000004.2:48075013-48267574 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187267 1 XLOC_113315 NonCoding TCONS_00187267 XLOC_113315 NonCoding NonCoding - 4:48087569-48091116 - TSS139635 3547 1 TCONS_00187267_7 109 1 0 2.30149841095709e-05 0 1.56537883930112e-05 4.68234599113282e-06 1.80950261482782e-05 0 1.64412361399848e-06 0 8.89780804408672e-06 0.000138039384997743 6.32480486685667e-05 3.42749522624356e-05 8.08930783151235e-06 0 1.38319518344263e-06 0.000960555818055444 0.00254159511551804 0.000763975173325759 5.86290752053583e-05 2.02746915618845e-06 0 0.00063913677184745 0.000662124395659327 0.00127613525446907 1.95333324022594e-06 6.15759430989996e-05 3.13853428738328e-05 0.00043056773796212 0.000135496245333896 0.000106786412119155 XM_005250177.1 CCDC71L PREDICTED: Homo sapiens coiled-coil domain containing 71-like (CCDC71L), transcript variant X1, mRNA. 0.0 3016 78.99 0.998308429658867 0 noncoding 0 0 0 0 -0.290999686108162 0.104809241352615 -0.0388825721215394 0.468897858293354 CCGTATATTCTCTAAAATTTATTTACAATTAATAAGTTAAAAAGCAGAGTACAACCAGATTGTAAATCTTAATCATATGCACATCAAACTGTCCAAGGAAACAATTTAGTTCCATTAACAAACAATTGTCTTCTAAAGTACTTAAGACATAACAGGCTATCAAAAAATATTTGAAACACACCAATAAAGTAAATATTATGTATATAAGTCCACTAAAAACCACCAATTTAAAGAATGCTGTGGCTACCCTTAAAACAACAAAAGGCTTTGAGTTCAGAATTGCTCAGGTTTTTTGTATTCAAATAATTTTAATGTTTCTTTATTGAAGAATTTTATAGTACTATCATTTGCATGGAGCAAATCAATAGGTGTCAGCCACCAGCTTAGTTATACAAGTCCAACAGGGTACTCAAACTTTGACAAAATAAATACACACCACAACAGCGACACTTTGCACTATCAACAACAGAGCTTGCCCTTAACAATCATGACATTACTGGTTTCAGGAAGGAAAATTAAGTTGTTGGTTGACAGGGAGGATAAAAATGACATCAGGAAGATTCAAAGGTTAAGTGAGGTGACAGTCACCACATTTAGGCACTCAAGAGTTAAAAATGAAATAAAAGCATAGCGAGGTGATCAACTTCCTCCTAGCTTCTCCCTCTACTTGTGCCATATAAGATAATCTTATAAGAGAATGAATCAAGTCATGAGATTTCTTTTAAAAAACTATATACAAGCTAAACTACAGACTTAGAGGACAGAAAATGGATGCCTCACCATAAAGGCCACCTTGCCAAGTTTCTTTTCACATTCTGCCCAATGTAACCACAAAATACTTTCACTTTCCTATTAATATACTAGCCAACTATATTAGTTGCTTCTTCACATTTTAGGAGTTGTAACATAGGCTTTGCTAAAGAACACTTGGCAAAAATAAAGACTTTTTTGACACCTATTTCACAAACTAGAAATGGTATGATTTTTAAGCAGACCAGATAAATAACATATTGAATTCAAGATGGGCAATCAGATCCAAACTGAAATCAGACAGCCCAGATAATTCAAAGAAGCATTTATGCTAGTTCAAGTGCACTAAAGTAACAAGGCATGAGGGAAAAATGTTAAGAATCTCAGTTAAAATAAAATGCATGATGTCAATGGTTGTTTCCGTTTTGTGCTGAGCAGTTATCCTCCCAGCTAAGTTTAATTTCAAAACCCTCTGGGAAACTATCTGGATAAGCTGTATGTTGAAATTACATTCTAATATGGCCATTGAATTTATTTTTTAATTATTATAAAACTATATACAAAAGTAAGTGGTACCAATACATAGTTGTTTTTTTTTTTAGGGGCTAGTTAACTAAAAAAAAATGAACAATTTGGGAGTGAGAGAAGGGAGAAAACCTTATGTGTCTGCAATACAACTGCCAATGGAAGCTAATAACCAAAAGAATATATATAAGCTTCCTATCACAGAGATCAAATGTAACTCTCCATCATCTAAGTAATGATTCATTTTTATTTACTCATGTGACAGTGTTTGTTACAACGCATTATTATTGAGTAGTGAATAAAAGAATACGAGGCATACTGGGAAACTGGCATCAAGTCATGTATATATAATATATATATATATAATTTTCTTTTTTACAAAACAAGAACACTGAAATTAAAGTCACAAAACTCCTACTTATGTACTATTAAACTTGAAAAATTCAATTCAGAAAGCTATGCCATTTGAAATCTAAGAACACAAGAGTCAAAATTGCAACTCTTACTATTCTCCTAAGAAGCTGCCAAGCAGAGAGAAATCTTAATATTGAGGACTTCCTATGTTAAGTTCCAGCCAGTGTAAGTAGTTTCATGGCAGACTACTTAAATTTGAAAAACTGTGGTACAAAAACCACTTGACCCTTTAGATATTGCAGTAAAATCTGGCTGTGGCACCACTGGCTAAATACCATTAAGTCTTGCTGCCACCAATGACCAAAGGCACTTGGATAATCAAGAATTCCACTCTGGGCCATATGGTATAAACGCTATTAGAGAAGTGTATAAGAAGGGTCAGTACCTAGTGTGAATCGCCCGTTGGATTCCTGTGGTCTTCAGCTGTCAACAAAGACAGGTAACTGCAAACATAATTATGAATGGAATTAAGGTAAAAAAGGATACTCGTGGAGGAAAAAAGACAAATGTCACGATGTCTATAAAGGTGATGGGTATTAGTCGGGGCACTTTCTGCTATTCAACACAAAGTAGAGAAAGATCTATTTTGCCCAGAGTAATTTCAACAAGTTATTTGATACCAAGAAATGCCCCCACCCTCTAAAAAGCTAATAGTTCTGAGAACTCTAATGGGTATTCTGTTTACCATTTTAATCACCAGGTTTACACACATTCATTTCTTCTACGTGGCTCCCAATTTAAAATAGGTTACCTTTGAACTTCTTTGTATGTTAGACCAGTACAAAGAGGCCAAACCATTTCCAATAGGATTCCATCCATCTCTTTAACCAACACCAGTTCTTTGTAACTCATTTTTTTCTTTATCACAAGCCATGTGGTTTCAACGTACTTTAATTTTTATTTAATCAAAAAGAATTTAACAAATCAACTTTTCCTAAACAGAACTTTATATGAGTTTCTACCATTTTCTTTAGGAGCTCAGTAAATATAAACATTAAATCTCAATATAAAATCTTTAGAAACACCTCAAAAATGTTGAAATAGTTGTACTTTGCATCTCTTTGTTTGTAATCACTGAGCCCATGGCATTCAAATCATACAAATCCTTGCACTCTTAACATTAAGTCATTAAGTTTGAAAAATATCCTTGGTCAAAGCTTTGGAATCCGGTTAAAATTCGGAAACGAGTGGGATTCAGAATACCCTGAGCACAAACGGGTGCAACAACAGCACAAAACAGGTTCGATCTATCGTCCAGACAGGTTCGATCTTTCGTCCAGAAAGAGGGGTGGCAGTTGAAAAGAAAAAAATGGGGGTAGGAGGTGGGAAGGAGGCCGGGATAGAAGAGCGGGGTGAAAAGCAAGTAGATTCTGGCTTTATTACACGAAACCAAATTCCTTTGGAAAAAATAACGACTTCTTCGGAGGACTTCCAGACCAGTGAGGTAGAGTCCAAAGGGAGAAAACGGATCTGCCCCTTCAGTCCTGGAGACGTCTCAGTCCGGGGTAGGGAAGCAAACGGCCCTCCCCCGCGGGTCCCGCGGTCTCCTCTGCTGCCCGGCACTGGGAGGGGGTGGAGGGCGCACCTGCCCCGGAGTTCCAGACGGCGGTGCCGCGGGCCCGGGAACACCATCCGGTGACTTCTTCGCCCATAAAGTGCATAAGGGGACAGGGTCCTGGCCGGATCTGTAAACACTCGACTGACACTTGTCCATCCCCCCGGGCGGGAGCTCCGTCCCCGGCTGGGAGGGTGACGCGGTCCGCGCGTCATGCCCGGGGCACCGGGAAGCGGCGGAGCCTCACCACGGGTTCCAGGTTCACTCGCAGGATTTGGCGCGCTTTACGCCGTGCCGCCGCCA TCONS_00183906 TCONS_00183907 . 5' 114975 TCONS_00183906 TCONS_00183907 . 5' 114975 EMBV3_18157 GCTAGATCCCACAAATGCCACAACTAAGAGTTTGCGTGCTGCAACTAAAAAAGATCCCAG Gene GeneID:514651|LOC514651:XM_002696901:383_cdna Constitutive 0 NULL GeneID:514651 22 GENE LOC514651 NULL similar to 60S ribosomal protein L21 EMBV3_24615 GGTACAACAATGTGATCAACCCAACTCTACCCAAAGTGGGAGCATCCAAGATCAGCGTGG Gene GeneID:515764|PNLIP:XM_002698515:106_cdna Constitutive 0 NULL GeneID:515764 26 GENE PNLIP NULL pancreatic lipase EMBV3_04676 CTCCATCAAGTTTAGAAATGTTTGTCCTATGGTTTGAAGTCAGGAGCTGGAGCGTTTGGG Gene BVT0102_041706 + 0 NULL GK000027.2:38797991-38862135 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20442 TAGGAACATCGTAGAGGCCGCAGCCGTCAGGGACATTTCTGAAGAGAGTGTTTTTGATGC Gene GeneID:523671|LOC523671:XM_002689418:17_cdna Constitutive 0 NULL GeneID:523671 7 GENE LOC523671 NULL similar to 40S ribosomal protein S26 EMBV3_22624 GAGGCAAGATAAACATCGAGATTCCGTCGGGGCTGCTGAAGCGTGAACTCCAACCAAAAA Gene BVT0102_227539 - 1 EMBV3_41887 GK000029.2:19189738-19477922 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166670 1 XLOC_101506 NonCoding TCONS_00166670 XLOC_101506 NonCoding NonCoding - 29:19383513-19385161 - TSS124648 1648 3 TCONS_00166670_2 81 0.961771844660194 1 0 8.25588196493348e-06 0 4.64821324795184e-05 6.10269330853012e-05 9.98620372750909e-05 4.30283241683402e-05 1.79881707946128e-05 2.24314445419363e-06 0.000136817760762098 6.583112746411e-06 3.20857070336082e-06 5.6581893594799e-06 3.21671809079666e-05 6.95294458009045e-07 4.52679199747175e-05 8.42134909920714e-05 4.53735643483015e-05 0.000118793299576714 5.00399191862528e-05 2.4000540201061e-05 3.91439266419475e-06 0.000237910089210501 4.56013119550512e-05 4.60550664582918e-05 9.74043406000362e-07 2.6125897062535e-05 2.1331862091536e-05 1.36734143147411e-05 2.36380159580555e-05 3.1512400780918e-05 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 989 83.82 0.538834951456311 1 noncoding 0 0 0 0 0.0418002034799761 0.778573285061736 0.018534516378127 0.713640672576297 CTCTCAGGACAATGGAAGGGTCCTGACCCATTATTAACTAGCGGTCGAGGATGTGCTTGTATTTTTCCACAGGATGCAGATTCTCCAATTTACATCCGGGACAGACTGATTCGCCATGTTGCAGTCCCCCAGACATCCAGTTCTCTCATTGCTTCGATCACAAAAGAGGAGCCCGCCGGAAGGGGAGGCAAGATAAACATCGAGATTCCGTCGGGGCTGCTGAAGCGTGAACTCCAACCAAAAAATAATTCTACTTATTCTGTTTTGGCTTGTCTATCCTCTCCTTATGTTTTTCTCTTTACCAACGATTCTGGAAAACTTAATGTACATGTGACTTTTCACTGGTGGACCCAATGTAGTGACTTGTGAACAATGCATGCTCTCATCTTGTTTAAACCCTCAATATAATGTTTGCTCCTTTGTAGTGTTATAATGTCTACCTTATCTTATGATGTAACCACTTATTAATATAACTATAGTCTTGCTGTATTACAACAACTTCAGGATTTAATGCCATCGTGACAATTTTTGGGCCTATTATTTTAGGAATATCAGCTTTAATAGCAGCAATTGCTTCTGTTACTGTGGCAGCAATATCATTGACTCAACAAGTGCATACTGCCCAATATGTTGATACCATGTCTAAAAATTTTTCTTTAACAACACAGGAAGTTATAGATAGAAAATTGGAGATGAGAGTAGATGCCTTGGAAGAACCAATAATGCATATTGGGACTGAGTTACAGGCTTTAAAAGTGAAAATGGCTCTGTCTTGCCACGCTGATTACCAGTGGATATGCGTGACATCTTTAAAGGTAAACAAGACAGATTATAAATGGGAAAAAAATTACAAATCATATTTCAGGTGTTTGGAACAGCTCTGACATTGGCCTGGACTTAGGGAAACTTCATAATCAAATACAGACCCTGGAACACTCTCAACTGGATTTTACCGCCGCTGGAGCAGCTAATGACTTATTTCACACCTTCTCTAACTTTTATTTCTGGAAAAAACATTCTGTCTAATATCTTTAGTTCTAATTTTGCTTCTCATAATCATTCTTCCTTGTATTGTCAGGATTCTTCGGCAGAACATTCAAAAGCTCGCGACTGAGCTGCATCTGGCTGTTCTAAGAAATAAAAAAGGGGGAGATGCTGGAAGCCGGCATATTGCATATTGAGTGCATATTGCATATTGAGTGCAGCACTTTCCACAGCATCATCTTTCAGGATCTGGAATAGCTCAACTGGAATTCTATCACTGCTGGGAGCCAGCGTGAGGAACTCCGCCCATGACAAAGGTCGTGAGGAAGGAGGCTCGGCATTCGCAAAGGTGGGATCGAGCTTCAGGGGTCCCCCTGGAAATTCTCGAGCATCTAGCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTCTGAAAAAAAAAGAGTTAGCTTACAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTAACCTACAAACTCCTTTGGAAATCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACACGTGATTGTTCAGAGCCTCCCAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAG TCONS_00164594 . 3' 92762 TCONS_00164594 . 3' 94409 EMBV3_28703 GAGGTGCACTGAACTCCCTCTTCAATACCATCTACACCATGCATTTCCCCTTCTGTGGCT Gene GeneID:518474|LOC518474:XM_002689133:123_cdna Constitutive 0 NULL GeneID:518474 7 GENE LOC518474 NULL similar to olfactory receptor Olr1414 EMBV3_40191 CAGGCTTTGGTTTTGAAGGTCTAGGAGCTGAGACAGTGGAGCAGGATGACAGCTGGCTGA Gene BVT0102_233477 + 1 EMBV3_28122 GK000016.2:1317591-1327007 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22448 CAGCTAGCTACTTGAATCAGAATCAGAAATGGAATTTGTTAAAAATGTTGGTTCTAGGTC Gene BVT0102_391402 + 1 EMBV3_17445 GK000007.2:102086618-102227148 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04858 TTCTCAGTTCCTGGCTCCCAAGGCCATGAAGAAGATGTACAAGGCGTGCGTCAAATACCC Gene GeneID:514624|STARD10:XM_002693438:79_cdna Constitutive 1 NULL GeneID:514624 15 GENE STARD10 NULL StAR-related lipid transfer (START) domain containing 10 EMBV3_11583 CCAAAGGTTCTGATTTGATGGTGGATGATCTGCCAGCTCTTTAAAAGGTCACTGCCTAGG Gene BVV0102_299294 - 0 NULL GK000017.2:4165393-4212632 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31612 AGCCACACCCTGGCTGCACTAATCCTATGATGTGAGAGCCACCAGTGGAGGTCACTGACT Gene BVT0102_314840 + 0 NULL GK000025.2:395809-478494 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144041 TCONS_00144043 TCONS_00144042 1 XLOC_088438 Coding TCONS_00144043 XLOC_088438 Coding Coding RAB11FIP3 25:450943-465053 j TSS108239 2249 1 TCONS_00144043_1 313 10 0.841306967184067 1.36805178121994e-42 0.000324638785211333 0.000192622110567148 0.000562147334041671 0.00108950041302386 0.000383564977459676 1.26082821227984e-09 0.00100463222403361 0.000793544087593866 0.000264944763552664 1.79894406135193e-06 3.97461356269978e-05 8.93018911973258e-06 0.00016859445403904 3.62567434036438e-05 0.0031679694812457 0.00186028223711985 0.000518069427011143 0.000315798031123341 6.58620047556527e-10 0.000517942488588513 0.00210180688349377 0.000701614200522737 0.00137157929900658 0.000850902077369472 0.000349194146465059 0.000104771731253448 0.000350206624843421 0.00030867231099508 0.000956954626305457 XM_005196859.1 RAB11FIP3 PREDICTED: Bos taurus RAB11 family interacting protein 3 (class II) (RAB11FIP3), transcript variant X2, mRNA. 0.0 4053 100.00 0.998666073810582 XM_005255713.1 RAB11FIP3 PREDICTED: Homo sapiens RAB11 family interacting protein 3 (class II) (RAB11FIP3), transcript variant X1, mRNA. 0.0 1492 89.22 0.502890173410405 TCONS_00144043_1 sp|O75154|RFIP3_HUMAN RFIP3_HUMAN Rab11 family-interacting protein 3; 0.0 561 91.05 0.996805111821086 1 coding 0 0 0 0 0.0681530156768075 0.655391714821404 -0.00748588670497144 0.880042009708473 CAAGCTGCACAGCATCCTCACTGACGAGGCCTTTGAGTTTTACTGCAGCCAGTGCCACAGGCAGATCAACCGCCTGGAGGACCTCTCTGCTCGCCTGAACGACCTCGAGAAGAATAGTCCAGCGAAGCGGCTGTCCAGCAAGAAGGTGGCAAGGCACCTGCAGCAGTCGGGGGCCCTGACCATGGAGGCCCTGCAGGACTCTCCCCCGGGTCCCGTGGAGGGCATGGACGAGGACATCGCTGACAAGGTCGTCTTCCTGGAGAAGCGGGTGTCGGAACTGGAAAAGGACACAGCTGCCAACGGGGAGCAGCACAGCCGGCTGCGGCAGGAGAACCTCCAGCTGGTGCATAGAGCCAACGCTCTGGAGGAGCAGCTCAAGGAGCAGGAGCTGAGAGCCTGCGAGATGGTCCTGGAGGAGACCCGCAAGCAGAAGGAGCTCCTGTGCAAGATGGAACGGGAGAAGAGCATCGAGATTGAGAACCTGCAGGCCAGGCTGCAGCAGCTGGATGAGGAGAACAGCGAGCTGAGGTCCTGCACGCCCTGCCTGAAGGCCAACATCGAGCGCCTGGAGGAGGAGAAGCAGAAGCTGCTAGATGAGATTGAGGAGCTGTCCGTGCGGCTCAGCGACGAGCAGGAGAACAGGCGGAAGCTGGGGGACCGGCTGAGCCACGAGAGGCACCAGTTCCAGAGGGACAAGGAGGCCACCCAGGAGCTGATCGAGGACCTCCGCAAGCAGCTGGAACACCTGCAGCTCTTCAAGCTGGAGGCTGAGCAGCGGAGGGGCCGCAGCAGCAGCGCGGGTCTGCAGGAATACCACAGCCGCACGCGGGAGAGCGAGCTGGAGCAGGAGGTCCGCAGGCTCAAGCAGGACAACCGCAGCCTGAAGGAGCAGAACGACGAGCTCAACGGGCAGATCATCAACCTGAGCATCCAGGGCGCCAGGAGCCTCTTCTCCACGGCCTTCTCGGAGTCCCTGGCCGCAGAGATCAGCTCAGTCTCCCGAGATGAGCTCATGGACGCCATCCAGAAGCAGGAGGAGATCAACTTCCGGCTGCAAGACTACATCGACAGGATCATCGTGGCCATCATGGAGACCAACCCGTCCATCCTGGAGGTCAAGTAGCCGCAGGAAGTCTCCACCCAGCACGCGGGGTCTCCTTCGCCCAGCGGGAGGACACAGCGGAGCCGGGGCGGGGCCGGACGGAGGGGCTCCAGGACAGCCTCAGGCTGGGTGTGCCCCTCAGACCTCCCGCGCTTCCCGCCCGGTCGGGGAGGAAGGGAAACGGGTCCCCCTGGGGTGCTGCTCCCCGTGGCCACCAGGTGCCCTGCCCGGTGCCATCCAGGCCTGCGCTGCCCCTGGATGGCACACAGGCCCCAGAACTCTGGCGCTGGACGTGGGGGGAGGATAGGCAGGCGAGGACAGTGCCGTCAGGGTCCCACCAGGCGCTGCCGTGCCCCCAGCTTTCTTGGGCTGTTTGAGCCGGCACCCAACTGGAAGGGGCCCCTTGGTCCAGTGTGAAGCCTGGGGGCCTTCGGGTTACAGGGCCGTGCCCCCAGCCACACCCTGGCTGCACTAATCCTATGATGTGAGAGCCACCAGTGGAGGTCACTGACTCTGGGGGGCAGGCCCTCTTCCCCGTGCGAATGTCCACTGCCCCCAGGAGTCCGCACGTCTGGAGCCAGCTTCCTCCAGGAGTCAGAGGTCTTCAGGGGTCGTGGTCCCTCTGCCAGGAGCGCTTTGCAGGAGGCCAGGCAGGGCTGGCCCCCATGTCCACAGGTCAGGGCCTTCCTGGCGGCTTGGGGGCTCCTTCAAGGAGCAGCAGCATCACCCCCCGGGGCTGCGGGCCTGCCCCAGGGCCTGAGTGTGGCCAGGAGCCTCCTGGAGGGGGCGGGGTGGGGGCCCTGCTGGTGCGAGCATGTGCGTGAGGGAGTGTGTGTGCGTGCGAGCGTGTGAGCATGTGTGTGGCCCTGTGTCCTTCCACCCTCTGCGTGGCCCACCTTCTACACTAAGGTTTAAGATGTTGCCTCGTATTGTACATTCTGGGGGAAAGCCTTGGGTGTAAATCAGTGTAAACTTGGAGGAGAGATTTTTCTATCATGTAGAGTAGGTATTTTTTATAGATTGAAGGTTGATCAATTTTTTAATACTTCCAAGAGAGAAAACTATCTGTGTATACACATGAAATATATATATATGTACAATAATAAACACTGGAACTCTGCTCCCCGCCCTGCCATGCCCCACCACA EMBV3_37725 AAGTGAAAGTGTAACGGTGCCATATGTTTTATTCCAGTGGGTGTGATGCACTGAGAAGTG Gene BVT0102_228107 + 0 NULL GK000009.2:17303588-18473882 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015708 TCONS_00015712 TCONS_00015711 TCONS_00015706 TCONS_00015709 TCONS_00015710 TCONS_00015714 TCONS_00015713 TCONS_00015707 1 XLOC_008540 Coding TCONS_00015708 XLOC_008540 Coding Coding TMED7 10:4403000-4418690 j TSS11036 7022 1 TCONS_00015708_2 136 0.164767872401025 3 0.552616482886099 2.34729017040833e-40 2.2773352179875e-50 4.15682276318645e-06 2.38502388558175e-127 1.85248053631559e-129 2.6136667383027e-108 4.08618455790335e-20 3.39861233435225e-48 2.35652062550629e-08 1.59176841239687e-10 3.29965140520944e-09 1.79154501441586e-09 1.29700611711046e-06 7.35628455487926e-09 6.1269720386895e-37 0.00308574493948954 0.00210642349641141 0.00385442050740994 1.91612502480525e-10 8.23082112873661e-42 1.52005496176939e-87 0.0019107025307923 0.00143679300012643 0.00288345169173701 2.37918090431245e-106 8.3835021833219e-73 2.25147144790563e-114 0.000359055518591914 0.000256143446607275 0.000573103576336171 XM_005211176.1 TMED7 PREDICTED: Bos taurus transmembrane emp24 protein transport domain containing 7 (TMED7), transcript variant X1, mRNA. 0.0 5887 99.97 0.465109655368841 NM_181836.5 TMED7 Homo sapiens transmembrane emp24 protein transport domain containing 7 (TMED7), mRNA. 0.0 3009 78.85 0.504841925377385 TCONS_00015708_2 sp|Q9Y3B3|TMED7_HUMAN TMED7_HUMAN Transmembrane emp24 domain-containing protein 7; 7e-96 280 99.26 0.992647058823529 1 coding 1 1 1 1 1.10539042736657 0.0700735418201214 -0.0673748248092853 0.305674049227156 GCTTCCACGTTATTACTGGTGGTCACTATGATGTAGATTGTCGACTAGAAGATCCTGATGGTAATGTGCTGTACAAGGAGATGAAGAAACAGTATGATAGTTACACCTTCACAGCCTCCAAAAACGGGACATACAAGTTTTGCTTTAGCAATGAATTTTCTACTTTCACACATAAAACTGTATATTTTGATTTTCAAGTTGGAGAAGACCCACCTTTGTTTCCTAGTGAGAACCGAGTCAGTGCTCTTACCCAGATGGAATCTGCCTGTGTTTCAATTCATGAAGCTCTGAAATCTGTCATTGACTATCAGACTCACTTCCGATTGAGAGAAGCTCAAGGCCGAAGCAGAGCTGAGGATCTAAATACAAGAGTGGCCTACTGGTCAGTAGGAGAAGCCCTCATTCTCCTGGTGGTTAGCATAGGGCAGGTATTTCTTTTGAAAAGCTTCTTCTCCGATAAAAGAACCACAACAACTCGTGTTGGATCGTAATTTGAGAATTGATGCACCATTGCCGCTGTAATATTGCTGTCCTCCAATTAATTTTAGGTACCGAAGAACTTAATATGGCAACATTTTTAGAACCTTACTCATACACTTGTTGGGGGTGGGTGTACAATGCATATCCCAAGCTGTGGAAAGGACACCTTTTTTTATTTGTAAAGGTAGAAAAACTTTGGGACTTATTTTGGGCTATTCATAAATATTCAACACAATGATTTACACTTTTCTGGGTTGTTTCTATCTACTCACACGCTAACCTTTGGTAATTTTGATTCCTCTTATCCTTTTAAAAGTACTTTTCTTGTAAGCAGTGGATATTTTAAACGAAGCCTTCAATTTAATGTTAATGTGGAGGAAGAAAATTACCTTTTAGTTGTTTATAGTAAATAAAGTTTTGTTTTTAAGAAAACCAAATGTGATTAACTGTAGCCCAAGCCCTATTCCTGCATTGTTTAATTTTATGAGGAAAAAAAATCTACCATAGAAATATTAGTTAATATTGATATAATTTTAAATTGACACATCATGGTTTAATTTATTTCTCAGTAGCTTGGAAAATGTCATTTTTGTTGTTTGGGTTTATTCTATGATCTACCACCAGATATGTTATTTTTTTTTTTTTCATAAAGACAGGAACTAGTGTGTTTCAGTAACAGAGTTTACAGACACCTTAAAAATCAGACTGTTGTTAACAGGTAGAATAATCACAGAGTAATTTAAGACACTACAATGGGGAGCAAATGACATGAGAAAACTTTCAGTGAGTTATCAGCACACATTACATTTTCAGTGCTTTTACAAAGAAAAAAGGTGATCTGTTTCATTAAACATTGAATTGGCTAATTCTTGCTCTAATGTGGCTTTAATGTCGGGAGTCACTCCTAGCTTTAATTGACAGTTGTTAATATAAAAGTGAAAGTGTAACGGTGCCATATGTTTTATTCCAGTGGGTGTGATGCACTGAGAAGTGAGTTTCTTTGGGTTTTTTCTTTCTTTTTCTTCTTTGTTTTTTGGGGGTTTTTTTGTTTGTTTTTTGTCTTGCACATACAATTTGTACAATCCCTGATATAGCAGCCCTAAGATGATTTAAAAATTTAGAATGCTGTGTGTGTTTCTTATTTGATAATCTTCATTGATTGTACTGCATTTAATGAGTATTAAATAGTGCATTTTCTGTACACTATAGGATTTAGTCTGTGTTTGTATTTTATAATTTGCATAAATTGAGCTGACTGAAATAAGATTTTGTTCCAGGTATTCTAGGATACAATACAAGATGATGCAAAATTGTGTTTAAAGCTCTTACGCTGTTTAAAAAAAAAAATTACGACTGCTTTTTGCCATGTTTCTCTCCCCCACCTAAAAGTAATGAGTACTGAACATGACTGGCATATTTTTAGGGCTTTGGTATGTGGTACTACAGAATACTGATTGGACAGCAATTTTAGTCACTTAACCTCCACCAACTAAAAGTTAGCTCCTAATTCTAAGTTGTCTTAAAATGCACATACACTTGTGCATGTAAAAGCAAGATGAATTCAGGTTGTCCTGCTTGCTAATTTAAAATGCTAGAGTGTAGCAAAGGATGAACATACTTTAGACCCTTTAATTCTAAAATGTTTGAAGACCAAATAGCTACTCCTTCAACAATATTTATCAATGGATTAAGAACTGAAGTTTAAGATTGAACGGATTTCTCTTTTTTGGGATCCTGTCCTGCAGCTTTTTAAGTGTCCCTCTGTATTTAGATTTGCAGGTTTTAAACAGTACTGTTAAAGTGATAAACCTGAGAGTATGCTGAGTGTCCTTTTCAGGTTGCCTGCCTGCTCTTGTGTTCAGGTAATTACACCATAATTAAGCAGAGTTGGGTATCATCAAACTGCCAAATTTGGCATAGATAATAGTTATTTAATCTGTACCTATCTAAACTTCATGATATTTAAAGACTATTACCACAGATAACTTGTGATAAAACTATTGAGGTATATTAAAAAGTTTTAAATCACCACTGTTACCTGTTGCAGAAAATAGTACTGACTTAGTCTAGTCTGTAACTGGTTAAAGTTCGGTGGCTTGTCAATATTCAACTAGGTATGTATATAAAAATTAGAAAATACATATCTACCTGGATATGAATATTAAGTAGAACTTTTCCTTCTATATAATTTGTAGCTCATCTTTCATCTTTAATCCTTTCATAACTTGTTGCTGCAGTTTGAATTTCTCAGATGTTTATATTTGGACACACGGCTCAGAATACTTATTTAAACATCATTAGCTGTATATATTTTTAAAGCAGAATAAATACTGGAAAGGGACTTGATATGCAAGTTTATACTAAAATTCCAACTGTGTGAAGATAACATTTAAAGATATTACTTTGCTAATAATCTAAACATTCTTTTTATTAAAGAAGCAGATGGTCTGGGGTTCACAGCTTTCATCCTGGCTTGATGATAATCAACTTTGAAAACACAGTGGACTGGAAAGCAATTAAAATTGCTTTAAGTTCTTTTAAAGATTTCCTTTAAATCTCTACTATCCAGTTTTGCTTCAGTTTGTAAATGTGTAACATTTATGGTTAAATAGGACAAAGCAGACCCTATTGACTATTGTTTTCAAAAATTAAACAAATTGATATATAAATTATTTAGAGGGCATTTTCATTTACTTTTGGAAAGAAAAATTTGTCTAAATGACACATGCTGGTTCTGCAGGATTGTACCAATCAATTCTTGTAGAATAAAAAAAAAATCTTTCAACAAACTGACTTCACTTATTTCTGTCAAGATTTAAGTCTTTTTAAAGCTCCTTACCAACTTAGGCCTTGGGGTGCAGTTTTGTAGCAAGAGAGTGATAATTTATTTCATATTTTATTGGAACATCTTAGGGACTAAGTTAAAGAAGAGGAATACAACCTCTAATCACCTCACTTTTTAACCTTTTTGGTTTTCTTACTGAAAGTTGGGGGGAAAGGAAGTTTAGCCTTCAATTCCCTAAAAAGCTTCTTAGTTTTTAGGTAAGGTAACATTTGGTTGTATAATATTATTTTCTCAATGTTGTTCCCCCTTTATAATGTCATGGGGGACACTCTGGCTCCTAGGCACAAGTCTACAAAAGTAGCAGGTAAGTAACAGCAATACAGGTTAACCATCAGTATTTTACTTGTGTTGACCCATTGCATCTTTGCAATAATCCTCTGAAGTAAGGATATTATTCCCATTTTACAGATGAGGAAATGGAGGTTAAGAAACCTGCCTGTATATCAGTAATTAGCAAAATACATGAGCCATGGCACTGTGGTTCCAGACCCCTCTTTCTCAACCACAATGTGGTAGTACCTACAATTACCATTAAAGAGTGGATCTCTGAAGGCTTAGCAGTATACCTCAGAAGTGGTTCAGTGCTTTGGTTTTGGAGTTATAGCCAAGATCAGATCATGATTGGGTGATCTCATGCAAATGATCTTGTTAACTCCATATATTTCTGTTTCTTCATTTGTTATTAAGGTTATTTCTACTACAATGAGAACATAATGAGATTTATTATAAAGCACTTAGGCTCCACGCCTGTCATATACAAGTGTTTAATAAATAATAGCTGTGTTTTTGTCATTGGTCCAATTTAATCTCTTGATCCTTCTTTAGTTCTTAAAGTTCTTACTGTAACCAAGCTCATACGGCTCTTAAATAATATGTAACAAATACAGAAGTCCATCATGTACATAATAATCTGCTAAGAGTTTCAAAAATGAGTAAGATAATCTGACCTCCAGGAACATAACAGTTGGGGGAGATGAGATAGCTATATAAGGAACTAATGTTAACTAAGTCATGAAGCAGAAAGAACTTGGTTTCTAAGATACCTACAGGGTGCTAAAGGAGCAAGAAAATACACAGATCAAAAGACTTACTCCTCATGGCATTTTGCTTTGTCCTCTTCCAGAGTCGGGAGGGAACATGGTTTAGCTGGGCCAGCAGTTGAGTGAACCAATCTCTACATCAGGGATGTCTATTTATTGGTACAGATCAAAAAATATGTTGTTACTAGTAAAGGTGATCTCCTGAATAACCTCCATCTTGGTTGTTTCCAAATTCTGGAGGAAAATAAAGGGATGTTATCCTTAAACCACAATATGTGCTATTTTTCAGTCTACATTTCTCCATTTTATCCACAAGCTAGCATTATTAGGATGTTTGGTGAAATCTGGAAATAACACAGGGTCTGGCATGATCTGTTTTTAGTGCTGTAATTACTAGTGACTATTACTACCTTGTGGCTCAGCTGGTAAAGAATCCGCCTGCAATGTGGGAGACCTGGGTTCGATGCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCAAGAAAATGCCATGGTCTGTAAAGTCCATGAGGTCGCAAAGAGTTGGACATGACTGAGCGACTTTCACTCACTCACTCATTCACTACTACCTTAAAAAGAGAAGGGAACACAGGAATTTCAGAAATTGTGGTTCACAGAGTAAAACTGACCAGTAATCTGCCATCCACTTTGATGCACTTCATTTGAGAAATTGTGGTTCAGAGAGTAAAATTGACCAGTAATCCACCATCCACTTTGATGTATTTCATTTGAGAAATGTATTTCAGTTTTTGTACAGATTAATGTATATATTTTTAAAGAATTGGTGTTGTCTGTAACAAAGTTTTAAAACTTTTAAAAATTGTAAACAGGGTATTAAACATGTACAGCTTAAAGAGAAATAAAATTATAAAGCACATTCTCAATAACCCATGCTCAGATTAAGAAATGTAGTATTGCCAACACCATAAAAGGTTCTGTGTACCCTTTCCTGACTATTTCTTCATTAGCGATAACCAGTGTTTCGCTTGTAATGAAAATATTTTTTTTTCTTTTTACTAGTTAAGTATGCTTGTTCTTCTCAAACTTTTAAAAAAATTTCCAAGTAATCACAAACAGTTTTTTATTAGTAAATACAAAATCATGTGTTTGAATATTTTGTTAATATTAAATTGCTGTCAGCCTGCCTGAATGCTTGCTTTCTGTGCATGCTTACTCATGTGCTTCTCTCCTCAGCCAGTAACAGTTCAGTGTGGTCACTGGACCATACTTTGAATAGTACTTATGTCTACATTCCTGAAAAATGTCTAAAAAATCAGGCAAAAGTAAACATTAATAAATAAAGTTTAATGGAATATTAAATTCTATTTAATAAATTAGATGTTACATATATTCCTTTGTGACTTTGTTTAGCAAAGTCATCCGTGTTAATGCATATAGCTGTAGTTTCATTACTGTGTAGTAGTCCATCATATAAATATACTAAAGTTACGGTCTTTTCTTCTGTGATGGCATTTGAATTGTTCTTAGATTTTTGCTGTTCTAAAGCCACTATGAACATTTTTGTATATTATGTCCTGTTTGCACATACATATCATCCCTTGAGAATACCAGGGCTTCCCTCGTAGCTCAGCTGGTAAAGAATCCACCTGCAATGCAGGAGACCCCAGTTCGATCCTTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCACTCTTCTGGCCTGGAGAATTCCATGGACTACACAGTCCATGGGGTCACAAAGAGTTGGACAGGACTAAGGGACTTTCTTGAGGATACATCTACGAGTGGAATGTTTGCTTAAATCTAACTTTTTAAAGCAATAGTATCAATTAGTGCTTTTACCAGTAACAGTGGAAAGTTCCACGTTTGTGCTGTTAGACTTTTAAAACTTTACAAAGTCTCCTGGGTTTGTAATGCTGTTAAAGCAACACTTAAGAATTTGAGAGGAGCTTCCCTGGCGGTCCAGTGGCTGAGACTCCATGCTCCAAACGCAGGGGGCCTGGCCTGGGTTCAGTCCCTGGTCAGGAAACTAGATCCCACATGCTGCAACTAGGACCCGGTGCAGCCAAAGAAAGAAAGAATTTGAGAAGTGACTCGAGGAATAAGACCCACCCAGAAGTCTGTTATCCATTTTCATGTTTTTCAGTTATTTTTCTAGATATATGTATATATTTTTAAAGAAACTGCTGTCAAACCTCATTGTTGCTTCATACTTCTATGAGGTTATTTTTTTCCTCACAGGTTTGTCTGCCACATGGATTTCCTCTTCGTGAAGTCCTTGTTCAGATATTTTGCCCATTTAAAAAAACTGAATGTCTTGATTAACGGGATTCCTTTATATATTCAGGAGATTAATCTTTTGGTTATAACTACTTCAAAAAACTTATCACAGTTTGTATTTATCTTTCTGCTTCTAATGAAATACACCAGTCTTTTCCCATCTTGTTGGTGTTTTAATGTGTTGTTAAATACCTCTCTATCCTGAGGTCATGAGTGTCTTCTGTACTATGTTCTAACGTATGATCGTTTTGTCTTCTGCTTGGATTGAATTTTGTGTTTGGGATAAGGTAGGTGTACAGGTTCGTTCCCACACCCCTTAAAAACTCATCTCTCTGTTGA EMBV3_18066 AAGCAATGGGTGTTTTACTGGGGACGTTTGCACCTACCTGGGCTGGCTGCCCTCCTCCCT Gene GeneID:100335812|LOC100335812:XM_002696603:89_cdna Constitutive 0 NULL GeneID:100335812 21 GENE LOC100335812 NULL hypothetical protein LOC100335812 EMBV3_10338 TTCATTGCTTTCAGCTAACTGTCACCCCAGCCTCCCAAAGTGAAATGCTTGACCAGGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12777 AAGAGCTGTTTGCTGGAAAACCTGTGCTACAACATCCCCTGACCTGGATCCTGCTGCTGA Gene GeneID:507430|NIPA2:NM_001034298:7_cdna Constitutive 1 NULL GeneID:507430 2 GENE NIPA2 MGC128994 non imprinted in Prader-Willi/Angelman syndrome 2 EMBV3_16284 GAAGAGAGGGGAAGAATTTAATGGACTGTGAATTTCCAAAAAAAAAAAAAGACTGTCGAA Gene GeneID:281945|NR2F2:NM_174402:8_cdna Constitutive 2 NULL GeneID:281945 21 GENE NR2F2 MGC157288 TFCOUP2 nuclear receptor subfamily 2, group F, member 2 EMBV3_43671 GGCAAGTAGGAATGACTTCACCCTGCAGCTACCCAGACTGCACCTGGAGACCTTTGCAAT Gene GeneID:538331|LOC538331:XM_002689575:9_cdna Constitutive 0 NULL GeneID:538331 8 GENE LOC538331 NULL similar to myosin tail domain-containing protein EMBV3_39821 CTGGGATTGACTTGTGTCTCCTGCATTGGCAGGTGTATTCTTTACCATTGAGCCACCAGG Gene BVV0102_163120 + 0 NULL GK000013.2:53144994-53169425 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02588 GTTCTTCCTCACAGGTCAGAAAACCCAGCAAGCCCACCACCAATCCTTTAGTGCCTACAA Gene GeneID:533295|NSUN7:XM_002688230:149_cdna Constitutive 0 NULL GeneID:533295 6 GENE NSUN7 NULL NOP2/Sun domain family, member 7 EMBV3_18872 TGCCTGCAGTGACTTTGTCTCCAAATGGGAAATGGCTAGCGTGCCAATCAATGGACAACC Gene GeneID:514003|CDC40:NM_001075643:26_cdna UTR3_Alt 2 NULL GeneID:514003 9 GENE CDC40 MGC140426 cell division cycle 40 homolog (S. cerevisiae) EMBV3_31000 CCCGGCACGTGTTCCTGACTGGGCCCCCAGGCAGGGGCCAGTGGTCGCCCAGGACAGAGC Variant GeneID:521103|C28H1orf57:NM_001075816:84_cdna 158^417 5 EMBV3_31419 GeneID:521103 28 GENE C28H1orf57 C1orf57 MGC140669 chromosome 1 open reading frame 57 ortholog EMBV3_10241 TCCCAGAGGGAACACAGATGGCTGTATTTGGAAAAACTGGCCACGCAGAAGTAGTCCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36380 CAGAAGGCATTTCTGGGGCTGGAACCCGGGGTGTATTGCTGCTAAAAGGGCTCCCTCACT Gene BVT0102_147835 + 0 NULL GK000019.2:57047925-57053364 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39696 GGGAAACTCTCAACTTTAACATTGTTGCCATTGCAGGTTTGCAGTTCTAGTCTCCTGTCT Gene BVV0102_053696 - 1 EMBV3_01002 GK000010.2:32866742-33665330 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18965 CGGCTATCGTAAAACAGTGCTGCAATCAACAGCAGGGTGCACGTATCCTTTCGGATCATG Gene BVT0102_119166 - 0 NULL GK000029.2:45520847-45624665 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38251 ACCAGAGTGGATTTCATATAAAGTGCGCAGCCTGGAATTGTGTCGCCGTTTAAACGAGTA Variant GeneID:506450|CCM2:XM_002686879:67_cdna 328^483 3 EMBV3_32268 GeneID:506450 4 GENE CCM2 NULL cerebral cavernous malformation 2 EMBV3_32131 GGTCTTCCTCCCTTTAGCCCATTTTCATATTCCACCATTCTGTGTAAATCACCCCATGGC Gene BVT0102_310411 + 0 NULL GK000003.2:16785105-16801894 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172243 TCONS_00172247 TCONS_00172248 TCONS_00172246 TCONS_00172244 TCONS_00172245 TCONS_00172242 TCONS_00172249 1 XLOC_104069 Coding TCONS_00172249 XLOC_104069 Coding Coding CHTOP 3:16799929-16811452 j TSS128341 5994 2 TCONS_00172249_5 118 0.0113446780113447 5 0.480211768790141 2.3130766055086e-05 4.98891543466751e-112 6.40681288875825e-52 2.43795750857885e-32 3.18218478568788e-16 3.89795279383509e-63 2.94593908062065e-05 3.66994130596288e-277 8.10380960889747e-05 0.00027583921848287 2.18134864589979e-05 9.84616196441781e-05 0.000282089065904453 0.000524281770036928 0.000277078904206988 0.0021617619450813 0.000326430507769638 0.00198966349116747 7.79719742861284e-244 1.58407457814368e-17 4.39293464756197e-215 0.000741863600259391 0.000395800276161735 0.000476273088704351 1.04063989709278e-155 8.40999427131761e-151 6.83244040025148e-133 0.00016870736164732 0.000228577058433144 0.000646862145306175 XM_005203758.1 CHTOP PREDICTED: Bos taurus chromatin target of PRMT1 (CHTOP), transcript 0.0 2814 100.00 0.260093426760093 NM_023215.5 Chtop Mus musculus chromatin target of PRMT1 (Chtop), mRNA. 0.0 1647 81.22 0.295628962295629 TCONS_00172249_5 sp|Q3SYW9|CHTOP_BOVIN CHTOP_BOVIN Chromatin target of PRMT1 protein; 2e-72 220 100.00 0.991525423728814 1 noncoding 1 0 1 0 -1.52962269520908 0.00815046670039048 0.010403309780988 0.916438919341019 CCTCTAGGGGTGCGGCGGATCTGACGTCAGACGTAGCTGCGTCGACGCCATTTTAGCCGGTCCCATTCTGCCCTGGACGTGGCGGCCATTTTGTTTTCCACACCGAGCGGGAGTTGACGGCAGCGGCGTAGTGAAAGGAAGGAAAGAGCAGGCCGGGTGAGCAGGCGGACCGGCCGACCGGACAACCAGCCAGCAGCAACGAACTAACTTAACAATCTACCGCTTAACACATCTAACCAACCGCCCACCAAGTTAACCCGAGCCCCTCCACCGTCAACTCAGGTTCGGCCGGCCTCCGGCCCGCCTGCCGCAGCCGTGGTGGCAGCCCCGGGAGGAGCACTGGCGTCCGTTTCCTTCGATTCTCGGGATTTGAAGATGGCTGCACAGTCCGCGCCGAAAGTTGTGCTAAAAAGCACCACCAAGATGTCTCTAAATGAGCGGTGAGGCAGCCAACAGCAACTTCAGCTCGTTCATAAGAAAACATTACTTAAATTGGCGCTGGGGTCCAATGCACAAAAGTCTGTTTTAAACTAAATACCAACAGAAGGCTACAGACCTCTGTTCTTAGTTGCATCGTATGTGGTACACAAAACAAATTGGGCGGTTGTTTCAAAACCCCTTATCAGTAGATTTTTATATTATGCTATCTGAAATATTTATCTGGTGGGATGTATTTTAAAAAGACTCCTCACACCCTCCCTTTTCTTCACATATTTTTACGTTGATACAGGGGTGGTGCAGCTCGGTAGCATGACCCTAGCTGCAGTAGGCTTGCTGCCCAGTCCAAGGCCAGCAGTGTTGTGTCTGGCCTGTAAGAGGCAGGTAGCAAGCTAAGAATATGTCCAAAGGCCCTTGAATGTCATTCTTGGGCCTTGTAAGAGGCACTTGCTTTGCTCCATTTCACTTTCTTTCCACTCTGCTTTAGTTTGTTTTTGTTTTCAATTCTTTTACAGTTGAGTGTTCTCTTTCATCCCATTAAACTTAACTTGACAGGAGTAATAGAAGAGTGTCTTCACAAGCTCTTAGATGATTGAACTAACCTTTTCAGAAGTTATACTTTGGAGTCAGAAAAAATATATCATTTGATACAAAAAAAAGTTATAGTATTTAAAGGCACTTTCTGTCTGAGAGCTTTGTTCATTGAGTGCCTTTGACTAGTGACTTTATTAAGCTGGTATTAGCCACTAAATGATTTACTTATGTTTGTCTTTTCTGAAGCATATTTACTTCTCTTTATCTCTTAGGGTGTGTTACTCTGATTCTCTATATTTGCATATTACAAGTGACCAAATACATGCGAAAATGTGATATGCTCTTATAATTTATGTGGGTATATCATTTTCATGGGCTTTGAAGGTGCTCTTGTCCTTCCGTATATTTGCCCGTAAAATAGCACCCTCAGGTCTCCTGAGGTTTTGGCTTGCTTTGTCCGTCTTTGAAACTACATCTTCTGTCTCTTGTCATCATATCTGCTTATTGCGTGTTTTTCATGCTTTCCACCTCTAAAAGCCGTTACCTGAGCCCTTGTTATCACTTTTGATTGAATGTGCTACACTTAGCTGCATTTCTGAGTTTCTGATTCTTGCAAGTTTGTGGAAGCAGAGGAGTCTTGAACCCACATCAGCATTGATCTAAGTGTACCACTTTAAGTTCGTGGGATCTGGAGCTCCTGGTCTAGCAAGCCATGAAAATGCCAATAAATGTTTTGTAAATAGCTTTTATTTAAACATCCATTTTGTTCGACCTTGAAGCTTTACTAATATGCTGAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAACAGCAGCAGCTAGCCAGTGCCAGAAACAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGGTAAAAAGTGGACCGTCTGGAGATAGATACTCAGAGGAAAAATGGACACACTGGCCTCTTTGACTGAGAAATCAAACTTGTTCTTATGTCACAAGAATTCAAATGAACTTATAATTTAAATTTTGCCCAGAGTGTGATGAACTTCCTATGGTGTTTGAGTAAGCCTTTGAAGAGAGTGGTAGTCCTTGGGCAGGTATGAATCAAGTCATATCATTGTCAACTGGTGGTTCAAAATCAGCAGAATCCACGATTTGAAATATAGTGTACTTATTAAAACTTGCATTCCAAGTAGTGGTATATGACTTCTGTAGCCAAACTAGTGAGATAATTTGTGGTGATGCCAATTTCATGGAACCATACTCAAGCTTCTTAGAAGCTCTGGATCAAAATTCTGCTTCTCTTACACTGTGTTCTGAGGCAAAGGCTTGCTTCTGGTTTGGGATCCTTGACAGCAAGTGCAGGTTTATTTCCCACCACACAGACATCTCGCTTCTTTTTCTCTGCACTTTTAGTTGCTAAATCCCATTGGATTGCTTTTTTGATCTCAATTCCCTAACACCTTTTCTTCCAGAAGAGCTTAAAGCAGCGCCTGGGTAAGAGTAACATCCAGGCACGGTTAGGCCGACCCATAGGGGCCTTGGCCAGGGGAGCAATCGGAGGAAGAGGCCTGCCCATTATCCAGAGAGGCTTGCCCAGAGGAGGACTTCGTGGGGGACGTGCCACAAGAACCCTGCTTAGGGGCGGGATGTCGCTCCGAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTCGAGGTCGTGGAGGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATGATAGGTCGGGGAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGCCGTGGACGAGGGAGAGGTGCCCTTGCTCGCCCTGTACTGACCAAGGAGCAGCTGGACAACCAGTTGGATGCGTACATGTCGAAAACAAAAGGACACCTGGATGCTGAGTTGGATGCCTACATGGCTCAGACAGATCCCGAAACCAATGACTGAAGCCTGCCCACCCTCCTGGAAGACTCTTGTTCAAGTCACACATCTGTAAATAACTTAGGATAACAGATGGGAAGAAAGCTGACTGATACTGAAAGGACCTATCATAATAGGCTCTGGACTGACTTGCCACCAGTTTGTGCATCTAGTGTGTTCCTTTTACTTTTTGATACTATGTTGTATGAAACCCTTTTTTTCCCCTCTGACTGGGGTTTGGTTTTGTTTTGTTATTTGGGGGGGAGGGGTTTCCTTCACCCAGACTTTTCTTTGAACATGAATGTGTTGGCCTTGTGGCTAGTACACCCTCTTCCCCCATCTGCCTCCCCTCATCTGTCATATGCTTTGACAGTCTAACATTTCCTCTGTTCATTTTGGTGCCCCCGTGAAAAAGTCCCAAAAAGAGCCCACCAGCGTTCCACCTTAATGTCTAAGTTTCTGAGAGAGAATTCTGTTTTACATTATTTTTAAAAGCCTCTAAAGTGTTCAGAAAATCTGGAGCTCATAAATGCATTCTGCCACACTGATGTTTTAGTAAATTGGGAACATTGACATAGCTACAGGGCTACCAAACACGTTAATCGTGCTAGCAGCTCTGATTTAATTAAAGTTATTACCGTGTACGTTTGTACCACTTAACCATTGTGCTGGGTTGGATATGTGCACTTTCTACCCAGGAATGAGATTTATAAACCTGCCCTCTTGGTTTTGCATCATGCTCTAAGGGATGTTTTGGGGTTGGCTTAACATCCTACAAAAGAGGAGAAAGCCTTTTGGTTTGGCAGATGCCTCAGAAGGGAAAGGGCTGAAAATGGATGACAGATACCTGGTGGGAGGGGTCAGAAGATAACCTTGCTAAAGTGCTGTTGTCCTTCTGTTTACCCCAGACCAATCTTGGGCTTCTCCATTTGTTGACCCTCTTCTCAACTCCCCACGAAGGTTAAAGTTCAACCATCGTCTGTCAACTATTCAGTTTCAGTAGAATCTTTTGTTTCTGGCTCATGATAACAAGAAATTGTTCTCTCAAATCCAGCCAGGACTTTCTCTTTATTTGTTGGGCTATTTGAAATGCTATGGCCACTATAACAGTATTTCAACTCTACCCCTGTAGAGTTGTGAGTCCTTCATGGTTGTATTATAATTCAGGGTGGGGAGGTTGTGAGTTTGGGGCAGAAAGTGAACAATTTTCCCTCTTTTGAATAATCCCCAAGGCAAGATTAACCGTACAAAGTAAAGTACTAACTCATTCGGTGCATAGAAAGCTCAAAAGCATTAAAGTCTCAGAAGGCAATACCTGGTACTCCCAGGACTGGTTTCCCTTTTCCCCAGTGCTGTTTAAGGGAAAAGAAGAAACTAACCACCTCCAATCAAACCAGTTACATTGAGCTACTTAGTACCCTAAACTGTGTGTGTTGTTGCAGACTGGGAAGCAAATTTTGGTTGGGAAGACCTGAATTTGAATCCCTTCTATATGACCTCACCTATTTAACCTCTAGGTGGGGAAGCAAGTAGTCTAGTGGTAGATGGGGGAGTTTGAAAAGACCATATGGGGTTGGGAGAGTCATGTTGACATAACCAACCTGACCCAGTTTTGAAGTTCCTATATTACAACTAAATGGAACGTGGGACTGGAGGTCTTCAGCCCAGACATATGTTGATAACCTTTACATTGTAAGAGTAAAAGGTATGTTTGTGTGGGCAAGGCTAATCTTAAAGATAGCTCCTTAGAACTCTGACTCCGAGTAGACCCCCAAGACTTTTGTTGCAGAGGTACTGATTGGCAGTGGGCAGGCTACACCTTGAGATCTTCACTTCCAGGGCTTCCTGGACATGCTTCAGAGAAAGGGCGGGAGCTGCAAGGTGAGTGGGTCCCTTTACCCTCTTCAGCCACACAGTTTGGTATGACCGAATTTCTGAGGTCCATTACCACTGTCCTTCCCAAATACTTTGAACTTAGCAGAAGATGACTAACATGCATGTGTTCTTCAGGATATTTTTAAGTTGGTATCTTTGGTCCCATCTGTAAGCCACTGAGATCTTCTGTAAGAAAAGGGGTGAAAGAGGCACTGGGGCATCCTGGGGGTGAGGGGTTGCTCTGTGGATCGCAGTGAAGCTGGGCAATGAGGTGACCACTGTAGCTTAAGCCCCCTTCTCTTCTTCTGTATCCCTCTAACCACTCCCCCTTTTTTCTCCTCCTACCTTGAAAGAATGTCCAGTGTGAGTAAAGGAGCTTCCCTGCCAGTCACGGGCCCTGCAATCCCACCTGTTGCTCACTGCAGTTCCAAATCTCCTTGAGACCTATTCCCACTTCTGCCAAACTTTGTCTTAATGAGTGCCTAGGTGGAGTCAGCCTAGCTCCTGGGTCAGCCTTTTACTCATTCATCCACCATCTGCCAAGGACTTACAGACACGAACACATCATTTGTTAGGCACTGAGAGTACAGAGAAGAGACTGATGATGGATCATTAAACTCAAGAGAAAGTTTTACAGAGAAGGGGGAAGAATATTTGAAGGAGAGAACAATAAAAAAAGGTACAGAGGTCTCAGATGTATGCCCGGGAAGGCATTCAGCAGTTCTTCATAGTAGAGTGGGAGACACAACTGACCAGATTGAGTAGCCTGGAGCATAATTGTCTTGCTAAATACCTTTGGCTTTGTAATTTGGGTGATGGGAAGTCATTGAATTTAAGCCAGAGAGTGCCATGGGGTGATTTACACAGAATGGTGGAATATGAAAATGGGCTAAAGGGAGGAAGACCATGGAGTCTAGGAAACTGATGGGTTAGTCAAAAAAAAAGCTGGTCTGAACCTGGACCAGCCACATCCTCAGCAGTTATCTGATGTCTGGGATTCCTGTCACAGAGGAGTCAGGGGTGACCTGAGCAACCACTGAGGAGAAGGAATGAGACATACTCCTCTTCCTGGCCTACTCTTGCTGTCTCACTAGTTCCCTCATATGACCCCATGCCTGAGCTAAAGCCACTGGAAGTGC EMBV3_41017 CATCTATGATGCGCTCGAGAAACACGACAGAGAGGATAAAGACTCCCCAGCCTTGTGGCG Gene GeneID:692183|FHIT:NM_001040646:319_cdna Constitutive 0 NULL GeneID:692183 22 GENE FHIT NULL fragile histidine triad gene EMBV3_19897 CTTGGCTCTGCCTTTGGTGATAAAAAGGAAAACAGGAGTCCACCTCTGGGTACAGGGATG Gene GeneID:512649|SERINC4:XM_002696810:573_cdna Constitutive 0 NULL GeneID:512649 21 GENE SERINC4 NULL serine incorporator 4 EMBV3_30023 TACAGTCTTGTGGGATGCCGAGAACTTGGAGGTTCCAGAAACGTAGAAATCACCTGGGAC Gene GeneID:100297223|LOC100297223:XM_002690090:64_cdna Constitutive 0 NULL GeneID:100297223 9 GENE LOC100297223 NULL hypothetical protein LOC100297223 EMBV3_39214 AGGATTCATTCCTGGATCCCCATTTTCTTGCATGACGCATGTCCTGTATGTAGGAAGAGC Variant GeneID:614061|RNF115:NM_001076308:1_cdna 553^835 1 EMBV3_21755 GeneID:614061 3 GENE RNF115 MGC140179 ZNF364 ring finger protein 115 EMBV3_02314 TATCTCTTGGAGCTCACTGGGTGGACTAAAGGGAGTCAAGCCTCCTGAGGCGTTTGGAGA Gene BVT0102_168908 + 0 NULL GK000014.2:40307948-40420995 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00063810 TCONS_00178732 TCONS_00218950 TCONS_00206816 TCONS_00123275 TCONS_00063805 TCONS_00230831 TCONS_00117596 TCONS_00167122 TCONS_00230834 TCONS_00186490 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00149043 TCONS_00161424 TCONS_00116087 TCONS_00101341 TCONS_00111145 TCONS_00088422 TCONS_00222116 TCONS_00106013 TCONS_00238290 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00238291 TCONS_00223049 TCONS_00231769 TCONS_00033186 TCONS_00217532 TCONS_00207410 TCONS_00230833 TCONS_00011614 TCONS_00010443 TCONS_00222183 TCONS_00178734 TCONS_00162571 TCONS_00142474 TCONS_00230354 TCONS_00010832 TCONS_00217533 TCONS_00168478 TCONS_00142472 TCONS_00129561 TCONS_00231774 TCONS_00255144 TCONS_00157807 TCONS_00066112 TCONS_00176791 TCONS_00167922 TCONS_00157808 TCONS_00071703 TCONS_00238280 TCONS_00131535 TCONS_00011615 TCONS_00232767 TCONS_00162567 TCONS_00098201 TCONS_00162570 TCONS_00071451 TCONS_00158314 TCONS_00186834 TCONS_00154284 TCONS_00033205 TCONS_00230832 TCONS_00231776 TCONS_00063811 TCONS_00212984 TCONS_00222175 74 XLOC_090921 XLOC_038536 XLOC_108505 XLOC_132269 XLOC_125336 XLOC_074829 XLOC_038531 XLOC_140321 XLOC_071762 XLOC_101958 XLOC_140324 XLOC_112542 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_090920 XLOC_098315 XLOC_070256 XLOC_061582 XLOC_067045 XLOC_053209 XLOC_135425 XLOC_062697 XLOC_144957 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_144958 XLOC_136355 XLOC_141257 XLOC_019420 XLOC_131531 XLOC_125926 XLOC_140323 XLOC_007165 XLOC_005994 XLOC_135492 XLOC_108507 XLOC_099452 XLOC_086899 XLOC_139844 XLOC_006383 XLOC_103118 XLOC_086897 XLOC_078274 XLOC_141262 XLOC_158076 XLOC_096262 XLOC_040830 XLOC_106565 XLOC_102758 XLOC_096263 XLOC_043473 XLOC_144947 XLOC_080240 XLOC_007166 XLOC_142251 XLOC_099448 XLOC_058447 XLOC_099451 XLOC_043222 XLOC_096768 XLOC_112885 XLOC_094044 XLOC_019439 XLOC_140322 XLOC_141264 XLOC_038537 XLOC_130301 XLOC_135484 Coding TCONS_00207410 XLOC_125926 NonCoding NonCoding - 6:23347892-23353722 - TSS154917 5830 2 TCONS_00207410_9 134 0.0926243567753002 1 0 1.72333371503078e-05 3.12579338021033e-05 8.97322537255123e-06 1.0516600452595e-05 2.14811889678482e-05 1.40288715721895e-05 2.88780016705382e-05 1.12801021788367e-05 6.35072155119095e-05 0.00041251086712145 0.000191001510876784 0.000252096903565238 5.14478876342631e-05 0.000111004556234904 0.000136880232340654 0.00165019416274279 0.000591785563680731 0.00199994435028684 1.75275769134447e-05 2.9993852213128e-05 2.91036372079802e-06 0.000433635055153301 0.000511901343491923 0.000521894878950002 1.55748737310143e-05 1.42774587620872e-05 8.1051534842746e-06 0.000129203216094594 0.000149954028011754 0.00014697972206339 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 3e-112 412 93.12 0.0471698113207547 0 noncoding 1 0 1 1 -0.069690739815313 0.656150057551822 -0.417956814901918 0.00586549399704504 GGGAAATCGGGGTCCTTCGGAATGGGACCACCCACGAGGCCACGTCTGGAATGTCGTCGTGAGACCAGCCTCATCCTGAGGTGCGACCGGAAGGTCGGGAACCCATTCCAGACAAAGCAGGGGAGTCGACCCTCCTGTCCAGATCAGGAGGGTAGATAGGGCTCAGAGGAAGTGGTGCGGGAAAACCTCGGTGTTCCTCTTGAGGGAGACCGGGATGTCGGGGCACTTTGTGGGTCGCAATCAAGGGTGACAAGTACCGTTTCGGCCTCCAATACCTAACGTGGGACTTCTCCTGAGACACTGTAGCGGGAAAGGGCTTCATCTTGCGATGACGGGAGAACCACGTGGATTTTCTCGAGTTGCAGCGGGATTCTCGAGTTACGACGGGGAATTCAGGATGCCTCTTGTGTTGGCCCAGGGAAGTCCAATCTTCCATTCGAGTTGCGAAGGAAAGCTAGAGAATGCTCTCGAGTGACTGCAGGGCCAATAGACCTCATCTAGGCTTGTGTCCAGAAGCCAATGTTCCTCTCCAGGGGCGAAAGGGATCTCGGGGTTGCATTCCAGACGCACCCGGGGAGACAGGCATCCATCTCGAGTGGAAGCAAAGAACTCCGCTCTGCTCTTGAGTCGCGACGGGTATCTCTTGGAGCTCACTGGGTGGAATAAAGGGAGTCAAGCCTCTGGAGGCGTTTGGAGAGAGGTCGAGAGACTGGTCTCTAGGCCATACAGGAGACGAAGGCCCTCAAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATGTTTGGCACAGTAGTCTAGTCCCAGGGGACAAAATACAGGGAAACCTGTTATTACCTGTGGGACTCTGTTTTGAGTGAAGGAAGCAAGCATATAAATACATAAGTTGATATTTGTCACCCTGTATAACTTTTCAAAGTTACTATAAATCAACAAACATTTATTTAAGATAAAGGGAATTGTTATTTAAATATCAGATTTATCCATTATTAAAACTAGATTTGTCTAAATATCTTTCTCCACTATATTTTGTTATTGTTGAGTATGTTTTTTCATTTATAACTACTTTAGCCCCCCCTTCCAGAGACAAGCTAGTATTGACAAAATTAATTTTATTTCACTGGAAATTTTGTGCTCTTGATCTAGTTTTGCTATCCAGTTATATAGTGTAACTAAGAATGGATGCGTTTAGTGAGTTTATTATTTGCCAATCTATGTTAGATGAGGTTTGGTCTCAAAATGGTACCCTTGGCCCTGTTATGTGGGGAGGGTAAAAGTTGAAAGAAGTATTTTATACTTGCTCAAACATCTGATTTTTATCTCCAACTATACTGTGAACATGATATATCATTTAGAGACCTCGAACCAGCTTTGTTTAAATTTGTTGTTTTTAACTTTTAGATCTCCTTGTGTTTTACCACTCCTTGGTTACTTGTTCATGCAATACTTCACATTAATTCTAGTCTTGTTATAATTTCATGGCTAATGTATAACTGGATGTTTTCAACTAGTGGGCTGATGTTAATTTTGTCTTCCCTGTCTTTGAAATGCCTTATTTGCTTTCGTAGTTCAAAGCGTAGAAACTAGATTTGGTTCTGTGTCTTTACCCCCATTTAGAGATAATGCTTACAAAAGAATAGCTTTGAGTAATCTTAAGTGAGCTACTTTAATGGTGATTGAAAGAAAGAAAATTATAGTATTATTCACTCAAGCCATTCTTTGTACTTTGTCTGAATGAATAAGCATACTTGTCTCATAATTATAACTAAACAGGAAGTTAATTTCTTGTCAGTGATGTAATGAGACATGGTATGCAGCACTTATCTCTTAATCCTTAAAGTAAAAGAAACTTTTCAGAATTTCTCAGAAGTTACAAATCCCAAGCTAAATTGACTTTTAAAAGGGCTACTCCTTCCATATATGAAATTGTTCAGACCTGAAAATCTTTTTGCCAAACTCCCTTCTTTTGAAATCACTTCCAGTAGCCATGCATTTCTGAAATATTTGTTTTTCTTCCTTACTGTTTGTTTCTATGTACAGTATTTAAATTTCACAACATTGAAGTTTAAAAATTTTTTGTTTACTTCATAGCAGACTTGATGTTTATAAGAATTAGAGCAATTATTGTCTTACTAGTTGGGCAATTAATACTTCATGTTGACCTTTATCATTGGTCTGAGGATATACCTTTATATTTGCTAGATTGTAAAGCCTCTTTGAGGGTGATTCTTATCTCAAAATTTCTTAAGGCACTTATTCTCTTTGCTTCCTACATCATGCCCTCATCTTATCCATCTCCTAGGGTAATATTTTATGTTGGTCAGTATAGGTTTAAGAGGCAAGATCTGTCTTTATCGTGTGGATTTCCATGGTCATACAAATCTTCAAGTGAAAGTGTTGAAAGAAATTGGCTCTTAAATAAAATACAAGAAATAGCTTATACTAAGGGAATGAACTTTGTTTTCCCCAAATTGATGATACAAAATGTGTCTGTGCTACTTTAGTCATTATGACTTTGATGCAAAATGGATGGCAGAGATTGGAATAACATGATTGTGGAATGTGGTGGTAATTATTATACTTAGTATCATAATTATTGTACTTGACCTTACCACAGTAGTCATCTGAGTTAAGTTTTGCCAAGTCCTTGAGAGAATGATGGAACTAGACAAACTAGAAAAGGTTATTTAGAAAGTTACACCTCAACAGCAGAATTGATTAAATAGGAACTTTGTTTTTGTAAATGTTGGCTTTGGTTATGTTGCTCTAATGAGTAAGTAGTGGTGGTCATTAAAAGAATGTTTAGTGGAATGCATAAATAATAGTTACTGGAGGTTTTGAATCTTACTAATAACTCATCCACCCATATGTCTGGTCTATAATTTGGTTATTCATAATCTTATTTTTTCAATTTATAAGCTAGAGAAACAAAAGCAAATATTTAGCATTATGTTTAGACTTCTGCTCTTAGCCAGTATCTCTCATCCTTCTCATGTTTTACCTCTAATAGTCAATTGTCAAAAATACTGTGTCCCATGATGACAGAAGCAAAGATCTTCCTCAAAATAAACTGTAGGCTTTTGAGTCCCACATAAACAATGGTCAGACTCATTACTGTTTAATCATGTACCTCCAGATGAAAACACTCACTGGCTTAAGCTATACCTGTTGGTTGGCTGTTAGAGAAAATTCATTGACTTATTTTTCTATGGGTCTATTTAGGCTTTTAAGGGAAAGGAGAAGCATATTTCCCAGTGGGAGAAGGCCTGGATTCTCACACTGCCAGGTGTTCAGGAGGTCTCAGGAGAAGCAATTCAAAGGGAAGTGATCCTCAAAGGAGATTTCCCCACAAGAGCACATCATGGTGAAAAAGTGTCTTTTTTTTTTTAATGGACAATACAGTTTTCAGCATTGTGCCCTAGTTATATTAGGGGCTTCCCAGGTGGCATAGTGGTAAAGAATCTGCCTGCCGATGCACGAGATGCGAGTTCGATTCCTGGGTTGGGAAGATCCCCTGGAGTAGGAGATGGCAACCCACTCCAGTTTTCTTGCCTGGAAAATTCCACAGACAGGAGCCTGACAGGCTGCGGTCTATGGGGTCGCGAAGAGTCAGAAGCAGCTGAGTACACACACGTAAGCATACGTAGTTAATATGTTGTTGATCCATCTTAGTGCCCTTTCAAGGTGAGTGAAGCCTTTAGCTAATGTGTGCCAAACTCCCTGCCCCCTATTTTCTATTTCAGTGATCTTGATAGTTGGTAAAGAACCCACCTAAGTAGTGCTTTTCTCTATGGTCTGGAGGTATGGTCAAAGTACGAAGACTTCGTTGGTTATATATATGAGCTGTTCTTTCTGATTCTTGCCGCTGTTCCTCTTAAACTACTAAGAAGCAAAAAGCTGACAATTGAAGTTTTTCGTATAATTTTATAAGTTGTTTTTGTCTCTAAAGCCTTTGAAACCTTTAGGTTCTAAAGTCATTTTGTAAGGTGAACAGCAAAGACAAAATAGCTTTTGAAAATTCTTTGAATAGATGCTACATTGGAAACTGATCTCAAATCCAATAAATACGGTTCTTGCAGTGCCACAAATAATTGTTTTCTTACTTGACTTTAAAGTCCACATAACTTGAAAAATGGGTAACCTAGGCTCAATCTGAGTATAGTGAGATACAAACCAACGGTGAATAAGGAGAAACAAGAAAACACCAATTTTCTGTGTCTTGTTTAATTTGTGGCATTTATTCCTTGAGTAAAATGAAGAGTTGGGTTGGTGGGATTGAAATTTTTGTCTCCAGTTTGCAAAATACCGTGTCAAAGTAGTCATTAACTTTAAATACATCTTTGGAGCAAGGACACTTGAGAAGGTAGCCTTAAATGTATCTCTAGACCTATCTTTTAGGTTGTCTAGTAGATAACACTGCTTTGCTCTCCAACCAGTCCTGAAGCTCAGCGTGTCTTACATTTGGTTTGATTCAGTCTTTGCTTTCCCCTCTTAAGGGGGCACTAATGTAAAATGGATAGAAGACCTATTTCCATAAGATTGTAAGGGTAAAGTGATCAGTGTGTTAAGATAATTTTCATCCTTGGTGACTTAAGTTTATGTTCCTAATGTAGTTATCTATTCATCTATCCTTTGTAGCAGGAGTTCCTACAATATGTGGGTGAGGATGGTCTTTGATATCCCGTAAGTTAAGTAAAAGTTATTGTGTGGGCATCTGTATTAGGGATAGAGGGTCAGCAGTTCATCAGATTATTAGAATTCCTAGTCTTTGTCACAAATAATGCCATGTACATGGCTAGGAGTGTATGAAAATGTGAAGAAACTACAGAAACCAAATTTAGGATGGTCAAAAAAATTTAGGATAGTCTTGTTAACTTGTCAGGGAAAGGGATGGGTATGTGGGGAGTACATGAAACATCTGCAACACTTAAAATCTGAAGATCTAGAAAGTCAGTCATTTCTAGTATACTATTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCGGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCTAGTGCAGGAGAGTAGAAAGTGAAAGTGAAGTCGCTCAGTTGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCCACGAGACTCCTCGGTCCATGGGATTTTCCAGGCAAGGGTACTGGTGTGGGGTGCCATTGCCTTCTCCAATACTGTTGCTGGTACATCAAAAAATTCAACCATTTGTCTTGCTCAGAAAGCGATCAATGGCTTCGCATTGCCTGTGGAATAGGCTTTGCCATAGTATTCAAGACTCGAAAGATCCAGCCCTGATTAACCTTTCTAGCCATATCTGCTACTCTCTTAACCTGTACCCCACTGTGTGTCTGGTATACCAAACTACAAGCAAGTTTTTTAACATCCTGTTTTCTTTCACTCCCCTGGATTTTAATTTCTCTATCTTGAATGCTTATCCCTCTATCAAGACCGAGCTCAAATATCACTGGTTTAAACTCAGGCAAGGTTAATGATAACCGTTTCAAAATTCACAAAGCAGTTGAATGCCTTTTAAGTATTCAGGTTGTTTGAAACGTAATTTTTTAATTTTTTTATATTATGTCTGCTTTCTATTAGTCTATTGGGGAAGGCATTCATGGTCTATCTTGTTATTTTCAGATGTAATATGCTTGACACCAAAAAGGCAATCTCCATATAAAT TCONS_00202772 . 5' 97 TCONS_00202772 . 5' 97 EMBV3_01197 TTGCCAGCCTCCTCACCCAAATCCTGCTTGACCTGACCATCAAGGACACCTTCGCCGAGG Variant GeneID:281035|SERPING1:NM_174821:4_cdna 473^607 1 EMBV3_07104 GeneID:281035 15 GENE SERPING1 C1NH serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 EMBV3_13611 TCATGTCTTTGACACCCTCTGCAAAGCACCAGAGACGAGAGATGCCGGTGTGAGTGGCTT Gene BVV0102_183824 + 0 NULL GK000005.2:113037945-113060932 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201813 1 XLOC_123458 NonCoding TCONS_00201813 XLOC_123458 NonCoding NonCoding - 5:113040104-113041323 - TSS151381 1219 3 TCONS_00201813_3 77 1 0 0 0 0 0 0 0 0.00019614406383568 0 0 0.000891076284998975 0.000202815549358888 0.000184797482819019 7.76754574083311e-05 0.00020066262506756 5.23220870898768e-05 0.00194999218290246 6.80980144785761e-05 0.00057632921892101 0.000111770007794146 0 0 0.00144730468455256 0.000142991785286056 0.000811414193585439 0 0 0 0.000283663466684518 0.000238946834250802 0.000567193175090496 NM_001145398.2 TEF Homo sapiens thyrotrophic embryonic factor (TEF), transcript 0.0 818 74.79 0.998359310910582 0 noncoding 0 0 0 0 -0.0344182689993087 0.762177036676532 0.0872810494808288 0.313207683508193 AAAATGCTCACTTGGAAAGAGCGTGGCTGCTGGCCTCTTCTAGAAGAGCCCCTTCGAGTCAGGAGTCTGGCGGGGACAGGAAGGAGAGGTCCGTGGAGATTGACATGCTGGGGAAAAGGGTGCTCAGGTAAGCGTGTCTTCTTAGTCCTTGCAGGAGAGGTGGTGCCTCCTCAGTTTCCATCGTGGAGTTGGGAGTCTTCTTGACTCCCTGCCAGGCCCTCTCCATCTTAGGGCTAATGGCCAAAAACTGAGGCTCCTGTCCTCATGTCTTTGACACCCTCTGCAAAGCACCAGAGACGAGAGATGCCGGTGTGAGTGGCTTTCCCTTGGCTTGCAGTGGGCTGGGACGGGCCATGCCTTCCTGAGCGCCCCCTTTCACCTCAGTTGCAGCCTCCGAACAGACAAATCATGAATGAGATGGAATGTTGCAAGAATATGCATATAATAAATGTATATCTAGACATAGAATACATATATATTTAGGGAGAGCTTTCACAGTGACCAGCAGTCTTGTGGAGGACCTGGGTAACTCTTACCCTTGGCCCAAGGCAAAGGGTTTGCCTGTCTGGGGCCTGAGGTTGGGGAAGGCACGTAGCAGTGACCCTTGATTCTGGGTAAGCGTCGCCCTGGTCAGGGGGGACCTGCTGTGGCCCTGGCAGGCAGCGTCTGCAGTCGTCCAGGCAGAGGTGGGGCAGCAGGCGAGGGGGCCAGCTGACAAGGGCTGCTCTGTGCTGGGCAGCTCTCCATCCGGGACCCTGGGAGCAAAGGGCTCAAAGCCCCCTGGTTTTCATGGCAAAGCCCTACCACCCCAGAGCTCCTTTAACATCTGTTAATTAAGTGCAATAAATTTTTCTAGAAAATGGCAAAGATGACTTCCAGGTGGATATTGCTGTCTTACAGTGTTGGGGACGCCAGAGCACCACTTGGTTTTATTTTTCTAAGTGCATGTGATGTGACAGAGTGTGTGGGGCTCTGCGCCCTCCCCCGGGAGCTGGCATTCCAGCAGGCCCCTCTCTCCTTCACCCGTGTCGGGGAAGGAGGCACGGCGCAAACCCCTTCTCCCTGGCCGGCGCGGGGCAGATGCGGAGCGTAGCCCGCTGGCCTTATGTGCGTGTGTGCGTGCGAGTGTGCCACTGCTGGTGGGCCCGGGTGACGTGGCGGGAGGGAAGCCGGGGATGTAGCCTTTTCAAACAAAATTAAATATTTTGAGACGAGAATC TCONS_00193514 . 3' 57 TCONS_00193514 . 3' 1275 EMBV3_42964 TGTAGGCGACTGCAGAAACTTCATAAACCAGCCCTTCCTCAGAGCCAATGATGTCCCTGT Gene GeneID:281753|EPB41:NM_174311:24_cdna Constitutive 0 NULL GeneID:281753 2 GENE EPB41 NULL erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) EMBV3_41880 GGCTGGAGGTGGGGGCTAGGGATAAATCATGAGATTGGGACAGACACATACACACTACTA Gene BVV0102_139870 - 1 EMBV3_18156 GK000026.2:16159315-16231616 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01023 CTAGTTATTCCATAAATTTAATTTGAGTAGTTCTGAGCCTCCAAGCTTTTTGGTTGCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03246 AACGAAAAGGAGAGCTTGTTGAAGGAGAGGGATCACATTTTGTCCACGTTGGGCGAGACC Gene GeneID:531350|BACH1:XM_002684612:84_cdna Constitutive 0 NULL GeneID:531350 1 GENE BACH1 NULL BTB and CNC homology 1, basic leucine zipper transcription factor 1 EMBV3_31264 AGACGAACAGCCGGTACTATATCTGCAACAGGCTGTTGTTGTTGTACTCGAGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_01853 CCCCCAGCGCGCCCAGCTTCTGCGGATCAGGAGTCAGAAGGCTGCACCTTCGCTTCCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43568 GGAGGTGGATGACATGGTGCGGCTGGCGGTGCCCGACTCCAAATGCGTCTACACCTACAT Gene GeneID:614015|SMTNL1:XM_002707731:49_cdna Constitutive 0 NULL GeneID:614015 15 GENE SMTNL1 NULL smoothelin-like 1 EMBV3_35525 CTGCCTTATGGGGATCAAAGGAACTGTAAAGCGTAGCACAGACGGGGACTTCATTCATGC Gene GeneID:531382|METTL14:NM_001083714:36_cdna UTR3_Alt 2 NULL GeneID:531382 6 GENE METTL14 MGC138979 methyltransferase like 14 EMBV3_09063 CTGGGAAAGGGCTTAACGATTTTCCTCCTGTTCCACATTTCTCAAGGTTAATGGGGAGGC Gene BVV0102_147587 + 1 EMBV3_10518 GK000011.2:45543545-45583100 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027757 TCONS_00027756 1 XLOC_015324 NonCoding TCONS_00027756 XLOC_015324 NonCoding NonCoding - 11:45552987-45582128 - TSS19608 527 1 TCONS_00027756_1 36 3 0.982017844886754 0.000642577212614958 1.26868087630181e-248 0.000327394359482309 0 4.24093383528628e-87 2.04979309348233e-151 8.03150799903158e-139 0.000661392341766619 0.000118505645102141 0 0 0 0 2.50575500171667e-05 0 0 0 0 4.14612586058022e-21 0.000194546742235457 0.00023361601058682 0 0 0 2.29731833579607e-05 5.14072847923901e-05 0.000149811710471997 0 4.96589486542253e-06 0 XR_227063.1 LOC101903880 PREDICTED: Bos taurus uncharacterized LOC101903880 (LOC101903880), 0.0 946 100.00 0.992409867172676 0 noncoding AGGCCTCCCCATTAACCTTGAGAAATGTGGAACAAGAGGAAAATCGTTAAGCCCTTTCCCAGAGGAGGATTCTCACATCTGAAGCGGCCTCCTGTCAGGACGCCCACTCCTTAACACGCTCGCAACCCATTCCAGTATCCAAGAAGGCTGCCAGGTGACACTTTCTTTGGAGCCAGACAGAGACCCCCCCTGGGTGGGCTTCCAGGTATTGAGGGAATGGGCCAGCTGTGTGCAATGAGGAGACCCCCTCTCACCCTGGCCGGCTGCACACACGCCTACGAGGACGGCGCGGAACCCCTCATTTGCACCCGCACAACTGCTGCGTAGGCTCCGTGGCCCGAACAGAGAAAGAGGCGGGTTGTGCTGCCATCTGGCGTCCACACGAGATATCTCCTAGAATATCACATGCATGCTTTAAAGCTTCAAGAACCTCCGAAATTTCCTCTTTTCTATCACTAAAGGTTTTTAAGTCTAGTAAATTAAACTTCAGGAAATAAAATGAACGCTAATAAGCTGGCACTTTGTCC TCONS_00024861 r 5' 29136 TCONS_00024861 r 5' 136 EMBV3_12001 CCAAGACCTTCAAGGGCCGAGGCATCACAGATCCAGAGCAAGAAGAAGATCCTGGCGACC Variant GeneID:445425|TKT:NM_001003906:76_cdna 834^916 1 EMBV3_06088 GeneID:445425 22 GENE TKT NULL transketolase EMBV3_16421 TTTGCCTTGGAGGAGCCCAGGCGTGATTTGCCAGAACAGGAGATGTTCCAGATGAGAGCT Gene GeneID:516188|CCDC24:XM_002686515:687_cdna Constitutive 0 NULL GeneID:516188 3 GENE CCDC24 NULL coiled-coil domain containing 24 EMBV3_11550 CCCACTACCCCCCTCGATTACTTGATCCCTGAAAAACTTTTCATGTGTGCAGTATCGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31539 CTGCTGCATTGAGAATGTGCTGCTACACCAGAACCTGACGAGCGGCCAGACAGAAACGTT Gene GeneID:507857|ICOSLG:XM_002685127:77_cdna Constitutive 0 NULL GeneID:507857 1 GENE ICOSLG NULL inducible T-cell co-stimulator ligand EMBV3_33887 GTCCCATCATCTGATTCCTCAAGGTCCAAAAGCTGAGGACCCCGAGTGGCCATTCACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23333 AGTAGCTGCTTTCTTGTCCTGCCTATCCTCCAGGCGTCCCTAAAGCTCACTCTGAAGATG Gene GeneID:282513|PAFAH1B1:NM_174663:40_cdna Constitutive 0 NULL GeneID:282513 19 GENE PAFAH1B1 LIS-1 LIS1 MGC148442 platelet-activating factor acetylhydrolase, isoform Ib, subunit 1 (45kDa) EMBV3_21497 GTGCTCAGTCTATCTTTCTGGCCTTCCACCATGCCATCTTTGGGCAAGCGTACCTTAATG Gene GeneID:404166|KCNRG:NM_205808:29_cdna Constitutive 0 NULL GeneID:404166 12 GENE KCNRG NULL potassium channel regulator EMBV3_01965 GAGGAGAGTTTTAAACTCTATTCTCTTTAGGAAGCTTTATAGCAGGGTGAAGTTTCCATG Gene BVV0102_157564 + 0 NULL GK000005.2:87941550-87967758 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195823 TCONS_00195828 TCONS_00195825 TCONS_00195826 TCONS_00195824 TCONS_00195827 TCONS_00195829 1 XLOC_118150 Coding TCONS_00195825 XLOC_118150 Coding Coding ETNK1 5:87962053-87981046 j TSS145839 6537 2 TCONS_00195825_9 77 0.0425271531283463 6 0.656118365627633 8.75402120051829e-05 0.000165926333317653 2.44329491177783e-17 1.80160704186613e-10 1.7880058823079e-05 6.45890713136998e-08 0.000187433422635069 9.41934817784392e-05 0.000316052511270061 2.1163150711119e-05 9.27442100781817e-05 0.000270614858174585 1.18685108915768e-09 1.28334762464753e-10 6.62503409153719e-06 0.00132957178134018 0.0102565136030839 0.00228714527828929 8.52037202392166e-05 0.000129268834290805 2.31690547080423e-05 4.20546750484067e-07 0.000298351027912463 0.00327055888116404 2.45253945845071e-07 3.07408898580916e-12 6.39796844327901e-07 5.84685970748372e-06 0.000540993066271684 0.000218582760541374 XM_002687736.2 ETNK1 PREDICTED: Bos taurus ethanolamine kinase 1 (ETNK1), mRNA. 0.0 1.084e+04 100.00 0.919534954872266 NM_018638.4 ETNK1 Homo sapiens ethanolamine kinase 1 (ETNK1), transcript variant 1, 0.0 5261 79.21 0.917240324307786 0 coding 0 0 0 0 -0.18655115786076 0.336656234427365 0.0255180744636698 0.604074173516509 GCCTAAGAGAGAAAACATTTTGCCAACTTGAGTATTAGGTATGCCATTGTTGCTGCCATGTGGCGGCGCACCCGTGCTTCTTAAACGCACTGACTGGAGGTTTATCGCATCACTTGTTCACATGCACGGAGCCTGGTGATGTACAGTTCATTGATTATGAATATTCTGGATACAACTACCTGGCATATGATATTGGAAATCATTTCAATGAATTTGCAGGTGTGAGTGATGTAGACTATAGTCTTTATCCAGGTAGAGAACTACAGGGCCAGTGGCTGCGTTCTTACCTTGAAGCCTACAAAGAATATAAGGGTTTTGGGACTGAAGTTACTGAAAAGGAAGTGGAAATACTCTTCATTCAAGTCAATCAGTTTGCTTTGGCTTCTCATTTCTTTTGGGGATTGTGGGCTTTGATTCAAGCCAAATACTCCACTATTGATTTTGATTTCCTTGGGTATGCAGTTGTTCGTTTTAACCAGTACTTTAAAATGAAGCCTGAGGTTACTGCATTGAAAGTGCCTGAGTAAAGAAGACTTTAATTATTCTTAAGTAGCTGAACAGTGCTTGTGGATCTTTAAGAAATTCCAAAAAGTCAATATTTGTTAAAATTCTTTTAATTTGGTTTTCTTGCTTTACAAATTATGCCTCTTAACAACCAATTTATTTTTAAAATAGTCTGAATGATGTCAAGAAATATACCTACTGCTTTCAGTATGTGGTGGGTTAGAAGTTTGTTAAATCGGCAAAAAGATACAAAGATGTCAGTTTAATCCTTTTATAATTTAATCTATGTTATATGTGAATTATTTATTATAAATTTAACATGAATTTTGTGACCGCTTTCATCTGTTTCATCTGTTTGTTGAGTGTAAGCAGTGAAAAATTTCCAGAGAAAATATTGTTTTTGTTATGTTTAAAGTAAGATTAATTTCAGTAAACATTTTTGGTTTTTAGTGTAACCTTTCTGACACACTGTAAGTAAAATGAATCATTTACTCTTGAAATGCCAGACGCTGGTTTAGATAACTTAAAATGTTCATAGAAAAATACCTGTGTAGGAGAATGAAATACATTCACTGTCTATGATAGTGGTACATCTTTCTGAAGTATTGGAAAGCATTTTGGAGGGGGGAATATCTTAGAATTTAAATTTCCCTCTTCTTACATAGTCTGGCAGAATAAATATTAATATTTACCATATAATCCTGGAATAGATATATGATAGTTTTGTTACCAAAATCCGCATTAAATAATGTTTTCATGTACTATATATGGTCATTTAAGGTACAGTTTGTTTTTAAAATTTTACTGTATCAATTTGTTTCTAACCAAAAATTTTGTTTCACTTATTGGGATATTCTGTATTTTGTTTGTTATTAAATAGTAGCTAGTACAGCAGTACTAATTTTTGAAACAAAGGTAGAATGCTTATAATATTTGGGAACAAGAAAATGTTGTTTAGATTAATTCTTTTTTACTTCTCCAGATTCATTCCTTACACTGTGGCTTTATGTTTTAGTTTGGCTTCTGTGTCTTTAGAATGATAGCATTCATTCAGCATTCATTCTACTACTTGATAACACGTAGTTTCAGAGAAATAAGTTGAGGTGGTTAAAAGAATTAAATAAGGAACATTTAGAACATCCTGTACACTTAAAATCTAATATAACAGTGTGAATTAAGCAAAAATACTCATGGTAGGAGGGCTTCTGTTTGTTTTGATTTCTTTTGATTTTGTTTTTGTCTGTTTGTGAGAGGATGACAGTTATTATTTGGAAGGAACTTGGGTCTTTGGGATAGATAAGCAAACTTCAAGTTTTGAAGACTGCTGTGTGGAGTTGAGCAGTCATGGTTAACTTTGCTTAGAAAATTAGTCTGAGAAGCTTTGCACACTTTGGTCACATAAGTGCCCATGTACAAGGTTGGCTTAATGGATCTGCATATTCAGAATATGCAACTGCAAATTTATCCTCTGAGAAATCTTATGGAGTGTCTGATGTATTATTCCAAATGACTTATACTCTCAGATAAGTGCTTTAAAATAACTTGGATTAGCTCAAGATGTTTAAAACTGGTAAAGTAAGTAGAAACACAGGCATTTAAAATGGTAAATTCTAGTTCCATGAGTAGAATCTTAAAATCTGTTTGAATCTGTAACAGTGTTAGCCACGATTTGTTTCCCACCTCCCCAACATTGCAAATGTTCCTTTCTGTTTTTATAAACCGTATTACCATTGGATCAGTAGAATTTTACCTAATTAACTAAAGGAAAGGAACCAATTAAACAGTTAATAGCTTTTTATAGAATGTTAAGAGTGAACTTGAGAAATTGTTTTTGGTGGAATTTTCATCTGTGGCTGGAACGTTTTCTTAGGACAACGAAGAATATGTAGGACTGGAGGGTTTTTTTGCTTTCTGACTTCCTAAAAGGGCAACAGTATACATCTTGGAGAGGGTGGGAGGAGAGGAGATCATTTTTCTATCTTCCTCCGTGTTCTTCAGACTATTTTGAATAGATTCACTGAGCCATTCCTGGTAGACTGTGCATGGCTGCTCGCTGTGACACCGTTGTAAGTGGTTCAAAGAGATTCAGGAAGTGAATGTAAAGGGGAATAAAGACTCTCACTTTAGCCCTAGGCAGTGGATCTTGGGAACAAAATAAGATACTTAAGATATTTCTCCCACTCTTTGGGGTATCATGATGTTCTCACTTCCTTTGCAGGTTTTGGGGATCATACTTCAGCCTAATAATAGAGTTCACAATTGCTTCCCTTTGAATTGACCATTTAAGGGATTCTCAAGGGAAAGCATCCCTCTAAAATTTGTCCTGTGGCTTGCTGAGATGTCTTTTGCCTTTTTATGTTAAGGAACTTGAATGCCTTACCTAATAACTGATAGTAAGCTCATTTTGTAAATATGAAAATGGTTGTTAGAGAAGTGGCATTCATGTATACTCATTGTTAGTCAGTAGACCATAGTGGCCTGGATGCTTAAACAAGCAGAATTCCACAATTCTTTTCCCCTTTGTTCCGTACCTACTTGTGTGATCTTACCTGACCAGTAATACTTGACATTTTTCCCTCCAGACCCCATGCTACCACCACTTTCTGGGAATTAAAGAGATGTGGTAGTAAATCATACTGTTCACGTGATCATTTGAGATCAATATGAGCACAAAACTCATCAACTAGGTCTGCCTGGAATGTATATACAACAGTGTAAATAAAAGTTTGTAAATTAGTGTGAATTGTATCTTGCATATGAGATTGTGTATTGTTTTTTGCATTCTCTTCCCTTTTGTAGACATTTTTCTGTAAGGGAATGATCCAGCTCTTTGGTTTAGACTGGAAATAACCAACAGATGGGGCGGTACAGTGGGATAACAAGAGGAACTGGAAATAGGGTTATCCATTTTTGTTAACGTCAGTACTTAGTTGTTTAGCCTATCAGTGCCTAATATGACTTTTTTTCATTCTTTATTCGGCCGTTAGTTTTTGGAGGTTAGATTCTTGCAAGCATTAAATTAATACCCTGTAAGAATTCCATTCTTTGAGTCATGATTCTAAACTAAAGCAAATTAAAAATGCAATTTTATGATTGCAAACTGAAGTATTACCCTTTTCTATTTTCAAGGCTGTTAACTTTTTCCTACCAAAAAAACACTTTCAATTTTTATATATCTCAATATGATTCTTAAGTCCCATATGTACAAGGGAGATGATAAATAATAGCTTCTAGTTCAACTTAAGCATATCTCAGTTGGCTTCTCTAAGTATGAAATTGTTCATTAGGGGATTGTAAAATACAGAAAAAGATAGAACTGTTCTTTTAATGACTGCTAATTCCATTTTTGTTGAACTAGGAATATTTAACTTCATAAACATATTATGAAAGCTTCCAGATTTAAAGGAAAAATTCCCCCTAAACACTCTGAATTAAAAGTTAAAAACCTCCACTTTTAAAGTTATATAGGTATTTCTTTCTTACATTTTCAAAATCCTTCATAATGTAAATGAGAAAACTATCATTTTGCTTTTCTGCTTTACATTGCTTTTAATAAGCATTTTATACTGCGTTCCAAAGTGATATAGACAAACTTTTAATATTAGTCAGTATTTCAGTTAATAGAGTTAACAATGCTTTATGCTAGGAGGAAAGTTTTGTTATTGACGGCAACTTGCATCACTCAACACAAAAGGCAAATGCTAGTAACTATTATGTACCAAGGAAAGTGAATTATAAGGATGTCCTAAAGCAACCTTAATCTTTATTTCAAAATTGATTTGCTCTGAATTTTCTAATATGGTTTGTTAGATTTTAGAATGTGTTTGACTGGAGACTTAGTTACATATTAAGGCCATTTGTTTTTGTTTCTTTTTTTAACAAAAGATATTAGTTATAGGGAACCACCTTTTTTTTTTTTTCTGTTACATACCATTTGTGTGATTACAGTGTTTTGTCTTGGGTTTGGTGTCTTCAGACAGAAAAATGTAGCAATTATTTTAAATGAATTTCCCCCCATCTTTGAAGTTTAGTGTGTAAATGTATTGCTCTAAAGGAAAATGCTTGAGTTTGCATTACTTGAGTACTTGAAAAACTGAAATTAATAAGATATATTACATGATGAATTGGATTTTTTTGAACAGGTTTTACACTAAAATTTTCCTTTCTGGATTATAATTTGAAATGGACAGATTTCAACCATTTGAATAGAAAAAATAATGGTAGTGCTTGTAGAAAATACCTTTTTGAGTTTGAGGCATTCAGAACTCAAGTTTTTAGTAGGGTTCTATCCTGCAATCTGCTTTCTCTTCTTTTTCCTGTACTTACTGATGTTATCAAACAGCCAGTTAAAATCTGTGTTCATTATGTATCCTATGACTTTTCTAGTTATGAAAAAAGTTGCTCTGTAAAATACTCTTAATCCCTAAATGTAGACATATTTTTGTTTACATCTTGCCCATTAATGGTATTAATACCATTAATCATTTTGACAAAACACAAGGTGTTTATAAAAACTGAAAACATTATGTATTATATTTGAACTAGTTAATGAAGAGTAAGAAAAAGCTGGCTGATTTGAATTGTTCCATTAGTTAAATTTCAAAACTCTTAAGGAAGGGACTTTAAGAGAGAGACCAAGATCTGATGATATCCATGAATACTAGATCCTATGAACTGGAAAAGGACCACCCCCCCAAAAAAAGCAGTGGCGGAAATAAGAGCACTTGCATGGTTGTGGTGTGCTGCTACCTAATTTATGTAGTGACACACTGACATTTTTATTGTTCAATAATCTGAGGAAGTTTTCTGTTACTTCCGTGTACTAAAGTAATTGTAAATTGGTGGAATTTGCAAAGAGGAGAGTTTTAAACTCTATTCTCTTTAGGAAGCTTTATAGCTGGGTGAAGTTTCCATGATTTGAAGTATTTGGATTTTAAAATATACTATTATTTTAAGAAAGAAGACCTGGCATTATTCCATGTTCTTAAATGATAATGTCCTTATCATTTTCAGAAGAAAAAAACTAAATTAATAACTGTCATTGCATTAGCTGTATGTTGAATTGGGAAATTGTGGCATAAAGGTTAAATTTGTGTTTATCAAATGTGAAACATAGTAGTATAATGCTGCTCTGTAAATACTGTAAGTGCTACAAATAGTCTCAGCACTGAAAATGTATTGATACCTCTCAAATGAATGCAACGTTTGAGGTAGGTGTATTTGATATGCCTCAGAAAGTATCTGAGTGTCTGAGAACTTGTAATCTGTTTGGTAATGAAGATACTTCCTGTTTTTTGTTGTTTATTTTCATGTTTCAAATTTAATTTTTACATTTTTACTGCTGTTAATTTAAGTAAAATTTGTTCTGTGGTTAAAATGGGGTTGCCAGTGAATAAAATTAAAAACAGCCTCATTCATGTAAACTGCTTAAATAAAAATGCATTTTTTGCTATATGTTCACAAACTTTTCATGAATCTGTATTTCTGTTAAATATAAGTGATGTTTAGGCTTTATTTCCGTTTAATAAGGCCTTTTACCATTGATTAAATGAAGGAATGTATCTTTTTGAAGAGATTTATATTCTGTAAATAAAAATTGGTTGTAACAATAAAGTTGAGTTCTAACTGCTTGTATCCATAAACTTGTGACTTCAACTTATTTTTGTAGTTTTCCTTTTGTAGAAAAAGCTTTTCAGTGTTCGTGTATTCTGTTTGTATATTTGAAGTTGTTCAGTTGCTCAGTTGTGTCTTAACTCTTTGTAACCCCATGGACCACAGCACTCCAGTCCCCGATGTCCTTGAAAGAGTTTGCTCAAACTCAGGTCCATTGAATCGATGATGCTCTCCAGCCTTCTCATCCTCTGTTGCCCGCTTCTGCTGCCCTCAGTCTTCCTCAGAGTCTTTTCCAATGAGTCGGCTCTTCACATCAGATGGCCAAAATATTGGAGCTCCAACTTAGCATCAGTCCTTCCAGTGAATATTCAGGGTTAATTTCCTTTAGGATTGAGTCCATACTGATAGCTCCAATATCTG EMBV3_32679 TGCATAATGAAGCAATGGCCCTTCAGAGGAAGATGGAAAACGAGGAGCTGGAAGCAAGGC Gene GeneID:510922|RSPH10B:NM_001166614:137_cdna Constitutive 0 NULL GeneID:510922 25 GENE RSPH10B NULL radial spoke head 10 homolog B (Chlamydomonas) EMBV3_24526 ACCCGTCCTCGGGCCACCTGTCAAATGTCTACATCTATGTGTCCATATTCCTCAGCCTGT Gene GeneID:100297762|LOC100297762:XM_002691800:437_cdna Constitutive 0 NULL GeneID:100297762 12 GENE LOC100297762 NULL hypothetical protein LOC100297762 EMBV3_26034 TCCCTGGCACCTGCATGCCCTTCTGAGTCTAGAGGCATAGGGGGACGATTGCAAAAGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38846 AGATCAGCCATAGATGTTCTGTGGGAACTGTTGGTAGCAGGTACACTGATTTAACACGTT Gene BVV0102_180956 + 0 NULL GK000001.2:28972473-29641224 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003069 TCONS_00003068 TCONS_00003067 1 XLOC_000778 NonCoding TCONS_00003067 XLOC_000778 NonCoding NonCoding - 1:29327852-29330330 - TSS1598 2123 2 TCONS_00003067_1 74 0.0932642487046632 2 0.143722244650787 0.000315593896487305 0.000391673818689696 0.000446692627249473 0.000119977096048411 0.000148354811039123 4.16300523162561e-05 0.00018128306874274 0.000278602072690323 0.000270678447021761 6.00796774839748e-05 5.22035449709518e-06 0 7.79945034000402e-05 3.75342638634802e-05 3.23535823716535e-05 0 0 0 0.000346699323562642 0.000941382409921972 0.000164440519018116 0 0 0 0.000502582677696943 0.000133285208560114 0.000241536745025607 3.76722807686025e-12 5.04460586219616e-12 5.69282995344327e-12 XM_001788240.3 LOC100138908 PREDICTED: Bos taurus uDP glucuronosyltransferase 2 family, polypeptide B4-like (LOC100138908), transcript variant X1, mRNA. 5e-40 170 79.90 0.089967027790862 NM_183397.2 PXMP4 Homo sapiens peroxisomal membrane protein 4, 24kDa (PXMP4), 2e-21 109 76.67 0.0682995760715968 0 noncoding 0 0 0 0 -0.0264058525234142 0.869769841274509 0.0390787093682311 0.481915843860315 ACCCACAGTAGGGAAGACTGTTGCTTTATCCTATCTGCCTTTTCCTTTATACAGTGGGGTGTTGTTACAGAACCTTTTGCTTCAGACCTATAAGATCTCCCATCCAGTAAACCACTGATGTCTCTGTCACTGCCTCCCATGTCTTTCTTTGGTCTCGAAGTTGGGCAGTCACAAAGCTTGCATGCCTGCGGGGTGTAGCCCAGCACCAGTATATTTGATAAAACAGGAAAACAATGTTAATATAGTTGAGTGATTTTGTTCCCCATCATTTTCATTTCCACTAATTCCTTTCTGTTCTCTGTCCCTCCAAATGAGAAATTTGGAAGAAAAACAATCTGCTAGGGACTGTTTCCTCTCATCTACTTCCCAAATTCCAAAGTTAATTAAAATTTTTAAAAGATACTAAGGAAAAGCTCAGAAGAGGAAGAGAGAATGGAGAGAAAAAGAAGTTAAACCTTGAAAACCGATACTCTTTCTGGATCTGACACAAGAAGGATCAGAAGAAACACGTGAAGAACAGGACTGAGACCACCCCAGAGTCTGCTGTAGAAGAGAACAGCATTCTCATAAAGAGATTTCATTTGGTTAGATAATTTAATGATTTTTAGGAAAACTGGCTTGTGCCTTGTGGACTGCTTTGTCATTTATTGTCCTGGAACTAGCTTAACTTCAAAAACGTGTTAAATCAGTGTACCTGCTACCAACAGTTCCCACAGAACATCTATGGCTGATCTGTCTTCACCTATAACTTATTTTTATTGTGTCTTACTGTGTCTTACACTATAACTTAAAAAAATGTATTTACCATTGACTAATCATACCAAAGTCTGATCCTGGGACTTATTAGATGCCCTAATCACTCCATTCTGTATTTCCATGGCTTAAACCTCACAAAAATGGTTATATTATGGAATTTCAATAAGCTAAATTCATGCCACACTTGTGTTCCAGAGAAAGCAACAGGTGTAAGAACTCTCAGACTGCATATGCTATCAGTAAGATGCAAGTGTCAGAGTCATAAAGGCCTGACAACACATAGACCTTGGAGTGTGAACTGTAATTTGATGACATATTACTGCCATCCTCTACCTGTTCATTTTCTAGCTGATGCTCTGACTTAACAATACCTGTTATATCCTGGTCCAAGTTTGCATCACTGGGAACTCACTACCAAGGAAACCCAACCTTGTTGAAACCCTCAGTTCTTCACCATTAATGGCAGATTCAGATTGCCTGTGGGGTTGCAGCTGATATGTAACCTCTGCCTCACTCTAGCATATTGTTAGTCCATAGCCCTGAGTGCAGAAATAATTGACAACCTGCTCCATCTCCTTCCGTATAAGCCTGCAGGGCATAGTCATCCACATTAAACAGCTGCTAGGTGACTGCTTCAAATATTGCAGTTTTCTACTGAATCCTGCTCAAGGGCAAGAACTTTCTGGAGGAAGAAAAGGAAATCTGTATATCAATGTTCAAGTTTCTGGTTGCATCACCGATTGGAACTACAGAAAGATGGGATATTCTAAAGTCAAGAGCAAAGTTGTCTAAATCCACTGGACATAGAGACAGTGGGGCTATGCACATCTCAATATATAATGTTGAGCAGTCTTTCATCCATGTATTATAGACATATGGTGTTTCTTTTGAATAAATTCATGTATAAGGAGAACCAGATGATAGACAAAAATTAACCTTTCCACTTTTAATAATTTAAATATTTTCCCTTTTCAAGTTTTCTCAATATTGTAGAAATATTTTGCCAGGGATATAGCATTATTTTATTTATTTTTGGTCCCTATTCTGTTAATCTATTAGTCCATAACAAGCCATGCTAATACTTGGCTCTTAAGAAAGATTCATCAAGGAAGATAAACTTCCCAGAAGCCTCTGGTGCAGCAGTACCCAAACTTTTTCGCACCAGGAACTGGTTTCTTGGAAGACAATTTTTCTACAGTTGGGGATAGAGTAGATGTTTCAGGATGATTCGAGCACTTTACATTTCTTGTGCCCTTTATTTCTATTATTATTACATCAGCTCCACCTCAGATCATCAGGCATTAGATCCCAGGGGCTGGGGACCCCTGTGAATATCCACTTAAATTTTATAGGCCAAAGGCTAGTAC TCONS_00003063 TCONS_00003064 s 5' 355004 TCONS_00003063 TCONS_00003064 s 5' 356667 EMBV3_39648 GACGTCAAGATCGAAGTAGGGCTCTATAAGCAGAAAAGCAACCTGAAGGTGGTCCTGACC Gene GeneID:524189|UMODL1:XM_002685123:48_cdna Constitutive 0 NULL GeneID:524189 1 GENE UMODL1 NULL uromodulin-like 1 EMBV3_37080 GCGAGAGGCAGGTCAAAACCTGGTTTCAGAATCGACGGGCTAAATGGAGAAGACTAAAAC Gene GeneID:539542|HHEX:NM_001105424:207_cdna UTR3_Alt 2 NULL GeneID:539542 26 GENE HHEX NULL hematopoietically expressed homeobox EMBV3_22929 CAGACTCAAGTTTGAACCCCCAGCTCTGCCATTACTGAAGTACGTGAACCAGGAACAAAT Gene BVV0101_034194 + 0 NULL GK000008.2:96390358-96612027 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25097 AGTCCTCGCGCTTCAGAAGAATGAGCTGCGGATCCTTCTCCCAATCTTTACAGTCTTCCA Gene BVT0102_412748 - 1 EMBV3_17297 GK000008.2:5672189-5746599 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19003 TCTCCAGACCATGGACCCTGAGGTGTCCCTGCTGCACTGGCCACTGCTGACGACTTCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37814 GCATGAAGGGAGACGAGGAAAAGACAGAGGACAAGGGCATGAAGGGGGATGAGGAAAAGA Gene GeneID:615242|LOC615242:XM_002697342:293_cdna Constitutive 0 NULL GeneID:615242 23 GENE LOC615242 NULL similar to spore wall protein 2 EMBV3_07606 TCTTTTCCTCCAAGAGTTTTGTAATCTCCTGCCTCAAGTGGGGAGGTAGGTGCAGGACAG Gene BVT0102_124818 + 0 NULL GK000016.2:2187561-2327396 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070684 1 XLOC_042462 NonCoding TCONS_00070684 XLOC_042462 NonCoding NonCoding - 16:2320966-2321961 - TSS52528 995 2 TCONS_00070684_1 41 0.952763819095477 1 0 5.46961461609975e-05 0 0.000186010115055936 0.00026706819312465 0 1.7975137466578e-06 0 9.51110114531073e-05 0 0 6.90207046932792e-06 9.34351579310734e-05 0 0 0 0 0 0 2.88278602250578e-05 0.0033861060781401 1.22038952740847e-05 0 0 0 2.08898827173476e-05 7.0808692395269e-05 9.12732081827306e-05 0 4.87900245821978e-06 0 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 6e-48 196 81.64 0.205025125628141 0 noncoding 0 0 0 0 0.0680366528756519 0.615368926638754 0.0220332720058707 0.651255191711001 TTTCTTCCCTGCTGTTTTTCTTTGGGGAAGGCTCATCTAGATGTTTTCCTCCTGTTTGGGGATACTTGATTACCCCTTCAAGTTTAAGAGAGAGAGGCTTAAAATCTGACTAGAAATTCCACTAGGCTTGTCAGCTAGTGGGCTTCACTAATGATCAAGCAAGGATCCTGTCTTTTTTTTTTTTCTTTTTTTCTTGTAGGATCCTGTCTTTTGAGGAGAAGTGGAACAAGTATAAATTTCTTTATTTTTTCCTCTTTTCCTCCAAGAGTTTTGTAATCTCCTGCCTCAAGTGGGGAGGTAGGTGCAGGACAGGCTGTCAGTGATCTGGGAGACAACAGCGGAAAAGGAGGACGGGGGTAGCAGGGAACTCATATTTCAGGATATAGGCTTTGATTTAACTCCCTTCAACTCACTCTTGTGTTGGTATCCCGGTACATGCTCAGCTGCTCGGTCATGTCTGACATTTTGCAGTTCCATGGACTGTAGCCTGTCAGGCTCTTCTGTCCTTGGGATTTTCCAGGCAAGAATACTGGACTGCGTTGCCCTTTCCTCCTCCAGGGGATCTTCTCAACCCAGGGATTGACCTGCGTCTCCTGTGTGTCCTGCACTAACCAGCAGGTTCTGTACCACTGAGCCCCCTGGGAAGCCCATTTCCAGGTACAAAGCCCCTCTAGTTCAGTCTCTTAAGAGAATAAGCCACTACTCTTTTGTTAGAGTGGGACTGGGACAGGTACATAGTTCCAGGGCTTGGAGACTGGATCTGTGGAGTCTAAATGCTTCTTTTAAAGATTCCCAACCAATCATCTCATTTTAGCACCACCTGGTAACTCCCACATCAGGGATACCAGGTGCCTCCAATTCCTAAACCTTTACAAAGCTTTGGGGGGGGAGTAATTGGCTTCTTTTTATCGGCTTTCCTAAGGCTCCGTTTTCCTGGTCTGCTAAGTCAGTTGTTATTTGCACACCAACACTTCAGGTTCTAAGTTTTAAAAAAT TCONS_00068484 . 3' 11419 TCONS_00068484 . 3' 12413 EMBV3_05111 CTGAGGATGGTACCCCTCTCTGCAACGCTTGTGGCATCAGGTACAAGAAATATGGCACCC Gene GeneID:782656|ZGLP1:XM_002688866:230_cdna Constitutive 0 NULL GeneID:782656 7 GENE ZGLP1 NULL zinc finger, GATA-like protein 1 EMBV3_11706 TACGGGTCTCTATCGTGGAACCTGGCTTCTTCCGAACCCCTGTGACAAACCTGGAAACTT Gene GeneID:281448|RDH5:NM_174166:896_cdna Constitutive 0 NULL GeneID:281448 5 GENE RDH5 NULL retinol dehydrogenase 5 (11-cis/9-cis) EMBV3_22453 TGAAGGTACCTGTAAGCCGGGAGACAAGGATGACTCAGCTGGGAATTTTTCCATAGGGAA Gene GeneID:281700|CNGA1:NM_174278:2_cdna Constitutive 0 NULL GeneID:281700 6 GENE CNGA1 CNCG1 CNG cyclic nucleotide gated channel alpha 1 EMBV3_39104 CTCAGAGAAGGTGGACATCATTGCCAAGCGTGTGCTGGGACTTTTAGAAGGACCTGGTAC Gene GeneID:100300732|LOC100300732:XM_002698024:216_cdna Constitutive 0 NULL GeneID:100300732 25 GENE LOC100300732 NULL similar to glutamyl-tRNA synthetase 2 EMBV3_07179 GGCACTTGTCCCCACCATGTCCTGCTCTGTGGGTCAGTGAACAGCTTCAGTTTATGGTTT Gene GeneID:613731|LOC613731:XM_002691864:173_cdna UTR3_Alt 1 NULL GeneID:613731 12 GENE LOC613731 NULL similar to fibroblast growth factor 9 EMBV3_37368 AACTTATGTGGTAGATGATAACAAGGTGAAGCGGAGACCCTGGGGAACATCCTGGTACCC Gene GeneID:506657|MRPL55:NM_001075276:17_cdna Constitutive 3 NULL GeneID:506657 7 GENE MRPL55 MGC137378 mitochondrial ribosomal protein L55 EMBV3_38211 GTAGAAAGGGAACTTGACACCCTTTATGAAACCCCAGAAGCCTCCCGAAATACCCATCCC Gene BVT0102_110924 + 1 EMBV3_27499 GK000003.2:118690528-118770319 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16614 GGGGAAAATCAGTGTTTCCCGACTGTGCAGCATAAGCAACGTTGATAGCAATATAGTGCC Gene GeneID:519739|AGPAT9:XM_002688391:40_cdna UTR3_Alt 2 NULL GeneID:519739 6 GENE AGPAT9 NULL 1-acylglycerol-3-phosphate O-acyltransferase 9 EMBV3_25622 TCTTTCTGTGTCTCAGCGGGAGATGGGGGCACGAACACCGTGTGGCTCAATGTATTTTTA Gene GeneID:529808|ATG2A:XM_002699385:360_cdna Constitutive 0 NULL GeneID:529808 29 GENE ATG2A NULL ATG2 autophagy related 2 homolog A (S. cerevisiae) EMBV3_04590 CATGATCCGGAACTGTCTTTCTCCACTTGGCCCTGAGCTGGCTGGACCCAAGATACATCT Gene GeneID:616225|ATOH8:XM_002691363:213_cdna Constitutive 0 NULL GeneID:616225 11 GENE ATOH8 NULL atonal homolog 8 (Drosophila) EMBV3_09367 GGATGGAAAGAGAAAAGCTGAGATGTGCCAACGGACCCATCCAAGGACCAAGATGCTGGA Gene BVT0102_273158 + 1 EMBV3_18030 GK000011.2:101438629-101477217 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41803 GATCCTGCATGTTAATGGGTTTAATGGAGATGAGAAGGCCACCAAAGTGCAGGACATCAA Variant GeneID:281793|GNAS:NM_181021:727_cdna 74^118 2 EMBV3_41353 GeneID:281793 13 GENE GNAS GNAS1 MGC148689 MGC152036 GNAS complex locus EMBV3_25319 TAGGCTTATGTGCAGTAGCTCAGGCAAAAGGATGGGCAAGAGAGATGTCAAGCTGATGCC Gene GeneID:518996|RNF182:NM_001077938:92_cdna Constitutive 0 NULL GeneID:518996 23 GENE RNF182 NULL ring finger protein 182 EMBV3_40629 GCATGCTTCCAAACCCAAACAGCCATCTTCAGAGACCACCTCCATCTTCCTTCGAGCACA Gene BVT0102_071644 + 0 NULL GK000013.2:73627422-73637275 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046203 TCONS_00046201 TCONS_00046200 TCONS_00046202 TCONS_00046199 TCONS_00046204 1 XLOC_026641 Coding TCONS_00046204 XLOC_026641 Coding Coding SERINC3 13:73635339-73653833 = TSS33550 4143 1 TCONS_00046204_4 472 0.0755491189958967 10 0.776510030822473 0.0012588266176193 0.000760991867261811 0.000738661440104844 0.000335312708862435 0.000727500411325012 0.000124353312719668 0.00012604203789033 0.000358172254708827 0.000641417414094235 1.69071978968748e-11 4.04578332380663e-13 1.52250537516597e-12 2.13947498430622e-05 5.42822504104922e-12 8.57038366512494e-12 0.0010481197787383 1.38473056904841e-07 0.00179153630823128 0.000497561536226238 0.000782025319414116 2.62563614203787e-05 6.7699879535642e-12 0.000455590200396933 0.000172173924276443 0.0010916776995138 0.000526945791725691 0.000444366266434259 2.62986638763833e-10 0.000109393984237221 8.97788423801846e-26 NM_001083412.1 SERINC3 Bos taurus serine incorporator 3 (SERINC3), mRNA. 0.0 3835 100.00 0.512913347815593 NM_006811.2 SERINC3 Homo sapiens serine incorporator 3 (SERINC3), transcript variant 1, 0.0 2423 81.31 0.617185614289162 TCONS_00046204_4 sp|A4FUZ5|SERC3_BOVIN SERC3_BOVIN Serine incorporator 3; 0.0 970 100.00 0.997881355932203 1 coding 0 0 0 0 -0.0321574723452481 0.85780593271649 0.0472157519468337 0.416750372239226 GTGACGCAGGCCGCACGTTTCCGGTCCGAGAAACCGTCGCGTTTCTGGGTGACGCCTCAGCCGGCAGTTAACCACCGTACTCTGAACTCGGGTGTCGGCCGCTTCCATCACCCGAGTCACCATGGGGGCCGTGCTGGGCGTCTTCTCCCTCGCCAGCTGGGTCCCGTGCCTTTGCGGCGGTGCGTCCTGTTTGCTGTGCAGCTGCTGTCCCAACAGTAAGAATTCCACCTTGACTCGCCTCATCTACGCTTTCATCCTCTTCCTGGGCACCATTGTCTGTTGTATCATGTTTCATGAGGGGATGGAGACTCAGCTGAAGAAGATACCTGGCTTCTGTGATGAAGGACTTAGTACCAGGATTACTGATATTATGGATAAAGAGTGTGATGTGCTGGTTCGTTATAAAGCTGTGTATCGAATCAGCTTTGCCTTGGCCGTCTTCTTCTTTGCCTTCTCTCTGCTCATGTTAAATGTGAAAACTAGTAAAGATCCCAGAGCAGCGATACACAATGGATTTTGGTTCTTCAAAATTGCTGCCATTGTTGGTGTCATGGTTGGATCTTTCTATATTCCTGGAGGCCACTTCAACACAGCCTGGTTTGTGATTGGCATGGTAGGGGCTGCCTTCTTCATCCTCATTCAGCTGGTGCTGTTGGTAGACTTTGCTCACTCTTGGAATGAGTCATGGGTAAATCGAATGGAAGAAGGGAATCCAAAATGCTGGTATGCCGCTTTACTGTCTGTGACAAGCTTGTTTTATATCCTGTCAATCATCTTTGCTGGGTTGCTGTACACATACTACACCAAACCAGATGGCTGCACAGAGAACAAGTTCTTCATCAGTTTTAATCTGATCCTTTGCGTGGTGATTTCGGTTTTGTCAATCCATCCGAAAATTCAGGAACACCAGCCTCGTTCTGGCCTCCTGCAGTCTTCTCTCATCACCCTCTACACCATGTACCTCACGTGGTCAGCCATGTCCAATGAACCTGATCGTTCCTGCAACCCTGGCCTGTTGAGCATCATTACGCACATGACCTCATCCACCTTGGCTCCTGCGAATACAACTGCTCCGGCCCCTACCCCTGCTGTGCCGTTACAGAGCGGGCCTTCTCTGAATAAAGAGAATTTCATTGGGCTGTTAGTCTTTGTTCTCTCCCTTTCCTATTCTAGCATCCGCAATTCCAGCAATAGCCAAGTAAGTAAGCTGACGCTGTCGGGCAGTGACAGCGTGATCCTCCGAGATACGGCTGCCAATGGTGCCAGCGATGAGGAAGATGGACGGCCTCGGCGGGCAGTGGACAACGAGCGAGAGGGGGTGCAATACAACTACTCCATGTTCCACCTCATGCTCTGCTCGGCTTCCCTGTACATCATGATGACCTTGACCAACTGGTACAGCCCTGATGCAAACTTCCAGAGCATGACCAGCAAGTGGCCAGCTGTGTGGGTCAAGATCAGTTCCAGCTGGGTCTGCCTCCTCCTCTACGTCTGGACCCTTGTGGCTCCGCTTGTCCTCACCAATCGAGACTTCAGCTGAAGCTGAGTGCCAAGGACGCCACTGAAATTCATAAAGGTCTCCTTTGCTGAAAGCTCACTTACTGTTTACTTTCGCTTCAACTAATATATTAAGCAAATGCTTTGCAAATAAGACTATATCCAGGTTTATATCGGAGGGCAAGATGGAATAATGCTTGATGCAGGATCAGAACCTTTCATTTATATCTCTATTGTGTTTATTTGTAAGGATAGAGAGCAAAAGGAACATTATGTTTTAAAGTGAACTACAGCTGTGCTGTGAAGAGAGTTCTTTATTAAGACTTGTAGGTTCCTACAACTTTGATTTAAAATGTAAGACAGAAAAATATTGGATACTTGAGGTTGTCATTAATATATTTCTATTGCAGTATCTTTAAAGAACAAAATAATTATAATGATGCATTTCTATGACAGTTTTCTTCTGTGAAAGTCTTTACTGTGTGATACAGGCCCTCTGTTCAGTCCTTAAACTCAGTGCTTGGGGAAAGGAGTCTGTGTGCAGGTCTTGCCCCAGAAGAGGGGTTGTTGGTCTGGCTGCTGCTTCTACGTCTTGAGTTTTTTTAATTTCCTTTTTATTTTTTATACTACAGCATTGATGCTGCTTGATTCAAGCCTGTGGCTTTGCTAGAAATGTTAATTTCAATAAACGCTTTGTATGTTTGGTTAAACTGAAGATTCACTTGAAAAACTGGTGCAGCTTTAGTCTATGTCATTATCTTGTTACGAGTATGTAAAACTACAAATGCATGTGAATATATTATATTTGCACTATAAAGGTATTTGATTAAAATAGAAAGACTTACGCTTTTTAAGGTCCTTTCTTTAACAGCTTTGATGAGTTAGCAGCGTTCTAGGTTTTTCATTTTTTTAGACTTTTTTGGGCAGTAAGGTTTATAAAGCATCTTCCAGAATGCTCTCCTGTTCCTTCTAAAGTTTAAGGTCTGACCAGTGAGTAAAGTCTTGAACTCATTCAGAAGTTCTACTAAATGTCTTTCCTGGGCAAGACACTTGGGTAGATGAGAGACAAGGCTTGTGTTCTCTGGCAGCTTCTTTGGGAGAGGTGGCACACAGAAGGATAGAGCAGTCTGCGTGCTCAGCGAAGGTTTACTGCACGTCTGTACCAGGCCCCTTAGGCCTGGGATACAGCCTCAAACAGACAGACACCGGCTCTGCCAGCTTGGACTTAGAGTTTCAAAGAGGGTGAAATGAGCTGACAGGTGATACAACGTGTTGTAATTAGTGCTGTGATTTAGGAATTGCAGAGAACTCACAGGAGAGGTGCTGGGTGGGGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGAGTTCACTAATGAGAGGAATAGAGGAGTGGAGTGGCATTGCTGAAGGATAGACTAAACGGTATGTTACAGGTAGGGAGATTTAAAAAAAAATACATCGTGTTCAGTGGCGCTTTAATGGAGAGAAGTGGTCTGGGACCAGGCCACGAAGGGCTTTGTAAACCACACTGAAGAGTTTGGACCTTGTGCAGGGGCAGCAGGGAGCACAGAGTGCTGTGGGCAGATGGTCTCGTCAGTCACTGCGGCTGATGTATGGAGAAGGGATCTAGAGAATGAGACCGGGGCAGTCCTTAGGAGATCTGAAACAGAGAAGTCAAGTGAGAACAGAAATTGACAGCTGAGAGCTCCTCAGTAATTAAACGTTTTAACTCGGCAGTTGATTAGCTGTGGGAGAGAGGTCGATCCTGAGCGATGCTAGTTTAGCCACCTGAAATCTCTGGTGGTTCTGTTTATATGGTGAGAAAAACCAGAAGGGGAGGAACAACCTGTGCTCGAAGGAAGATGGAGGTGGTCTCTGAAGATGGCTGTTTGGGTTTGGAAGCATGCTTTTGTTATTTTCTGTCAGGCTGGTCAGTAAATATTTACTGAGTATATACTATGCTTTACAACCTTAGGCAAAGACAAGCCATCTAAGCCTCAGTGTCTCCTTTGTTTGAAAGTTTATCTTGGTACGGAAGAGCATTTAGAGAGTAAAATTAGTTTGCAAAGTGCTTAACCATTGTAAGCATGCTGGTGGTAGCTGCTCATCTCCACATGGGCTAAAATGAGACTGGTCAGTAGTCGGAGGTCAGAGGTGTTCAGCCGTAATCTAATGGAGGTGAGATTTGAGGGTTCTTACAGAATTAGACACGGCCTAGAGGGGACAGTCTCAGCTGAGCTGTAGGTGCGGGGTCAGGAAGCAGGGCTGGATAGGAACTGTTGGAACTACCACCATTTAAACCAGTTCTTTATACCATGGCTCAGAGAGAAAATTGCCAGGGATGTGGGGGACAGTTAGGGAAGGTATAGCCCCTTACTCTGCCGGTGTAAAGCAGTCACCCCATTTTCCTTAAAGAAGGGCCAGCCAGATTAAGACTTTTAAGGGTCCTGAACTTTAAAAACATCACCGTGTACCACCCCTCCCCCACCTTATGTCACTTAAAAGCAATACTAAACTGTAAAATAAGTGTAACAGAGTCCAATAAAGGTTTTATTTTTTTCTCATGATG EMBV3_23768 TTGGGAAGAAGGTGGACGACAGCTCTGAACTCTCCAGTGTTTCCAAAACAGAGGCGTCAT Gene GeneID:282293|OPN1LW:NM_174566:19_cdna Constitutive 0 NULL GeneID:282293 X GENE OPN1LW NULL opsin 1 (cone pigments), long-wave-sensitive EMBV3_04847 CTATTTGAGCCACCCTTTCACAGTAGAGAGAATCATACGACCCTTGCCAACACCACCCTG Gene GeneID:539444|NYD-SP18:NM_001046457:18_cdna Constitutive 0 NULL GeneID:539444 4 GENE NYD-SP18 MGC137126 testes development-related NYD-SP18 EMBV3_17509 CGCTGTCTTGAGGTGCTGCAGGCCAATGATAACGCAATCGAATCCCTGGATGGTGTCACC Gene GeneID:516619|RABGGTA:NM_001015614:161_cdna Constitutive 1 NULL GeneID:516619 10 GENE RABGGTA MGC134349 Rab geranylgeranyltransferase, alpha subunit EMBV3_10188 CCCTTCCCAGTGCTCAGAAAAGCTAGACCATGTTCAGAACCAGAAAGCAGAAAGTCAAGG Gene GeneID:100298456|LOC100298456:XM_002688400:64_cdna Constitutive 0 NULL GeneID:100298456 6 GENE LOC100298456 NULL similar to Wolfram syndrome 1 protein homolog EMBV3_23750 AGGTCACTGGGATGGAAGTATGTCACTAGTGGATAGGCGGACTCCTGGAACTTCTTGTGA Gene GeneID:515302|WDR76:XM_002696812:579_cdna UTR3_Alt 3 NULL GeneID:515302 21 GENE WDR76 NULL WD repeat domain 76 EMBV3_29384 CCTTCAGGGACAAAGCAGGATGGAAGATTAAATGCCACGACAGTTCCTAAAGAAGGCCGC Gene GeneID:100336634|LOC100336634:XM_002690594:23_cdna Constitutive 0 NULL GeneID:100336634 10 GENE LOC100336634 NULL TRA@ protein-like EMBV3_31963 GTATGTGCTGTGTGCCATGTATCTTGGAAGTTGGCTTTCCATGAGCATTTTGAGATCTGG Gene GeneID:614715|TMCO1:NM_001034766:41_cdna Constitutive 0 NULL GeneID:614715 3 GENE TMCO1 MGC127543 transmembrane and coiled-coil domains 1 EMBV3_43699 CTCTGTCTCTACCCTCCAAGGATGTGATGCCACCCGGCCTTCTCTTGCACTTTGGACAAA Gene BVT0102_102156 + 0 NULL GK000028.2:28485435-28528041 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160483 TCONS_00160488 TCONS_00160484 TCONS_00160486 1 XLOC_097671 Coding TCONS_00160486 XLOC_097671 Coding Coding DNAJB12 28:28525596-28544418 j TSS120004 3376 1 TCONS_00160486_3 375 9 0.821104085861538 0.000442568935735182 0.000210933408683859 4.07661737397859e-05 0.000123424663487708 1.9351411462512e-05 1.90800746366132e-08 3.30070880339126e-05 0.000641669001615441 4.10931387752116e-09 1.46450568307065e-07 1.9489079159065e-11 0.000118069106888853 4.4214648292255e-08 1.57249165162816e-07 6.89469200502947e-44 0.00123506218405113 2.99844464337396e-23 2.59609582890205e-12 0.000410225881420277 7.70965286347915e-08 8.48578117610724e-25 6.13562055169939e-06 0.000813371129060009 8.81739643533079e-08 0.000405120272052497 0.000335395361435997 0.000119432311995462 2.0083198293293e-05 0.00017185171333974 2.11529470510055e-08 XR_240473.1 DNAJB12 PREDICTED: Bos taurus DnaJ (Hsp40) homolog, subfamily B, member 12 (DNAJB12), transcript variant X6, misc_RNA. 0.0 3573 97.38 0.62085308056872 NM_001002762.2 DNAJB12 Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 12 (DNAJB12), transcript variant 1, mRNA. 0.0 1680 90.69 0.359300947867299 TCONS_00160486_3 sp|Q58DR2|DJB12_BOVIN DJB12_BOVIN DnaJ homolog subfamily B member 12; 0.0 754 97.84 0.973333333333333 2 coding 0 0 0 0 -0.324541061373275 0.0602691583898398 -0.0368360096551803 0.458480025305844 GCAGCCCTTCGCTCCCCCGGCCTCCCCCTCCCTGGTTCCGCGCTCTGGTTCCGCCATGGAATCCAACAAGGATGAAGCCGAGCGCTGTATTAGCATCGCCCTTAAGGCCATCCAGAGCAACCAGCCGGACCGAGCGCTCCGCTTTCTGGAGAAGGCGCAGCGGCTGTACCCGACGCCGCGAGTTCACGCCCTGATCGAGTCCCTCAACCAGAAACCACAGCCTGCCGGCGACCAACCCCAACCCACAGAGGCAACTCACACGACCCATAGGAAAGCAGCTGGGGCCAACACGGCCTCAGCCAACGGTGAGGCAGGAGGAGAGAGCACCAAAGGCTACACCGCCGAGCAAGTAGCAGCCGTGAAAAGGGTCAAGCAGTGTAAAGATTACTACGAGATCCTGGGAGTGAGCAGAGGGGCCTCAGATGAGGACCTAAAGAAGGCCTACCGCAAACTAGCCCTCAAATTCCACCCCGACAAGAACCATGCGCCTGGCGCCACTGAAGCTTTCAAAGCCATCGGCACAGCATATGCGGTACTTAGCAACCCAGAGAAAAGGAAGCAGTATGACCAGTTCGGTGATGACAAGGGCCAGGCAGCCCGGCACGGCCATGGGCATGGGGACTTCCACCGCGGCTTTGAGGCTGACATCTCCCCTGAAGACCTCTTCAACATGTTTTTTGGTGGTGGCTTCCCATCTAGTAACGTCCACGTCTACAGCAATGGCCGCATGCGCTACACGTACCATCAAAGGCAGGACCGCAGGGAGAACCAGGGTGATGGTGGGCTGGGGGTGTTTGTCCAGCTGATGCCCATCCTCATCCTGATCCTCGTGTCAGCTCTAAGCCAGCTCATGGTGTCCAGTCCACCCTACAGTCTGAGCCTAAGACCGTCGGTGGGCCACGTCCACAAGCGAGTCACTGACCACCTGAACGTCGTCTACTATGTGGCAGACACGTTCTCCCAGGAGTACACAGGCTCCAGCCTCAAAATGGTTGAACGGAATGTGGAAGATGATTATATTGCCAATCTTCGAAACAACTGTTGGAAGGAGAAACAGCAAAAGGAAGGCTTGCTGTACCGGGCCCGCTACTTTGGTGACGCGGACATGTACAACAAAGCACAGAAGATGGGGACCCCAAGCTGTAACCGACTGTCAGAGGTGCAGGCCTCCCTGCATGGATAGTCCTGGGCCAGCCGTGCCACCGAGGTCCAAGAGCACCACCATTCACCTCAGTGGAAGCAGTCAGATGTGTTGGCCAAGGATAAAGAGGAAGAGGAAAGAGAACTCTCCATAGAATGTAATTTATAGATACGTGTATATGTATATATCTATTTATATGTAAATAGCACATATAAAGATATATAGAGAGAGAGTCTACTTTTTGAAACTATGCAGGGATTTGGTTAGGTTGTTGAGTTGATTTCTTCCCTGATTTAGAAAATGAGACCTGTTTGGGGAAGGGAGCCTGGTCTGTAGCTGACAGCAGAAGGAAAGTTGGGTCACAGCTTCTAATGTTGCCCTCAAGCCCAGCCTGTTTTTGATGGCAGCAGTAATCATGATAGCATAAATCTGTAGAGAACTTGGAAGGCTGCCAACTTTATGATTAAACTGGAGGGGAACAGGCCATGGGGAAAAGAAGGTGCCCCTAGGGCCAGGTGCCAGGTCAGTATTGTGTCATGATAGAGGCCCCAGATGGCCTAGGGGGATGAGCCGACCCACTGTAAGTTAGGTCAGCTCAGGTGGCACTTAGTCCTGGCGTCCAGGAGCCCCCTGACCCCCCACCACCGAGAACAGCAGGATTGGAGAGGGGAATCAGGTTCTGCCTGACCACCTCCCCGTTTAGTCCCTATGTGAGTTTTGCCTTATAGGTGCCTCCAGGCACAGCCCCGTTGTTGCTACTGGTTTTTCCTAAGTCATGGACCAAGGCTCCAGAAGGCTTTTCTTCCAAGAGTCATCCAGGTGGCACCCAGGACCCTGGGGCAGCAGCCAAATCCTGAAGAAAGTCCATGACCATGGGCACCTCTGTCTCTACCCTCCAAGGATGTGATGCCACCCGGCCTTCTCTTGCACTTTGGACAAAGGATGAACCAGAAGGTTTTCTTATCGTCACCTTCAAATGAGGATTTTTCTCAAAACAGCAGTTGCTGCCAGGGGAAGGGAGGGAGGTTTTATCTATTCCCACAGTTTATACTGGGCCTTTTGGAATTACCGTTTTCCCCATATTTTCCTCTCGTGGTGGGTGTGTCAGCTGAGCCTGCCATCCTCCGAAGCCTTACTACCCCAAACCAAGTTGCCAGCCAGGAGGGGGTCACCACCCTCCCAGAGCTTCTCTTGGCTCTTTTTTTAAAAGTCTCCCAACAAGTAGGATTCTTGCTGGGAAAGGAAGCTTGGTTAAGAAATGTCAAATATGGTTTTTAAACAAGGTCCTGCCCTGTGATGAAGTGGCTGCCCAGCCCAGAGAGATGCTCAGAACTGGATGCGGAGGAGAGCGCCCTGCCCGCGGTGGCCCCGGTGCTCCGCCCCAGCACCCCAACCCTCTGGTCTCAGTAGATGTCCCTAGACGGGCTGAGCCATGTGCAATAAGAACACAGATCCTGACGGATCCCCTGAGAAGCTGTATTTCTTGAATTAGAATTCTGAAATTGTATATCTATAAATATATGTTTATTATGTGATTGGTGGGTCTGTGTTGAGCAAGGGGGCCAGGTTCGGAGGGTAGAAGGGGGTACGAACACCTGCTGCTGCTGACACCGTCCTGCCAAGACCACGAGGAGTTTGGTGGCTAGTCGGCACGTCCCCTCGCCCCAGCTGACAGCCACTTCAGTCACAAGTGGTGTTTCAGGGCTGACTCCCATCACAGTGAAGAGTAAGCAGCTCACTTAGGCCAGGACCCAGGGGAATCCCTGGCACTAATCCAAGGTGGGCAACCTGGGCCTCCCCTAGGTCCTACCCCTCTGACTCCATCAGGCCTGTGGTGAACACAGCAGATTTAGAACCTCCCTTCTCCCCAGCCTGGAGCTCCAGCCCACCCTGGATCCAGAACAAGGGAAAAGTTCTCAGAGTTTCTTTCCATCTCTGGCTGCACACTCTTCCCAGCCATCCCTGCCACACCGCCCCCACAGCCTACCCTCCTCCCCCATGGAAAAGTTAAAAATGTGGCAGCCTCCGTGAATGGAGCAGCAGATCTGCCCGGGCCTCCCAGAGACAGGGCCCGGCAGCCCTGACTGGTGGCCTGAGGCCCCTCCTGCTGCAGCTCCAGCCAAAGACAGGCCGGCTGCCCGGTGGTGCCACGGCAGCCCGGGAGCTCATTGGCTGCCCCCACCCGGGTCACTGCGGCCCTCGCCCGGTCTGCGAGCCACCACTTGTTGGCTGCGG EMBV3_34155 CTTTAAATCAAAGGATGTCATGCGTGTGACTGCGAGCGTGCCCAGAGAGCAAGGTGCCAG Gene GeneID:539070|PANX2:NM_001102225:46_cdna Constitutive 0 NULL GeneID:539070 5 GENE PANX2 MGC166287 pannexin 2 EMBV3_32535 GGGGGTTGACCCAGGTGCTACAGACATCAAGCAAACCCACCCAGGCTTTACTGCTAAACA Gene GeneID:786520|CDHR4:XM_002697036:481_cdna Constitutive 0 NULL GeneID:786520 22 GENE CDHR4 CDH29 cadherin-related family member 4 EMBV3_18460 AGTTTTGAAATTATTGAAAGCCTCACTGATGGAGCCAAACAAAACCAGCTTGGTCACGTT Variant GeneID:512369|STARD4:NM_001080265:27_cdna 311^522 2 EMBV3_23994 GeneID:512369 21 GENE STARD4 MGC155130 STARD5 StAR-related lipid transfer (START) domain containing 4 EMBV3_18385 CCAGGGGAGTAAAACAAGCCTTATTCAAAAAGGGCAGATTTCCTACTGGTGCAGCTGGAG Gene GeneID:513376|STBD1:XM_002688357:161_cdna Constitutive 1 NULL GeneID:513376 6 GENE STBD1 NULL starch binding domain 1 EMBV3_01561 GTGCCATAGAAGACCAAGAACTGTTTTAGTCGAGGCTAGTCTGGAGCCTTTCTTTAGAGC Gene GeneID:512866|ERBB2IP:XM_002696290:23_cdna UTR3_Alt 2 NULL GeneID:512866 20 GENE ERBB2IP NULL erbb2 interacting protein EMBV3_09228 CTCATCATCAGAATATTTGAGAATTACATTTTAGAGAAATCATGTATTACATGTAGAGAG Gene BVV0102_266499 + 0 NULL GK000002.2:107245867-107256012 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26022 AGCCCCTTGTCTGTGGCCCCTCACCCTGACCTGTTCTTGGCACCTTAAATTATTGGGTCT Gene GeneID:100137722|PTP4A3:NM_001083766:2_cdna Constitutive 0 NULL GeneID:100137722 14 GENE PTP4A3 MGC155222 protein tyrosine phosphatase type IVA, member 3 EMBV3_43516 TGAGGGAACAGATCCAGGTGCCCTCCAACTTAGCCCTGAAATTTGCTGATGCCCACAACA Gene GeneID:510101|LOC510101:XM_002699520:43_cdna Constitutive 0 NULL GeneID:510101 X GENE LOC510101 NULL similar to PR33A EMBV3_17671 GTTAGCGTGAGTGGTCGGTCTCGATCCCGGGAACCCGGTGGCCTTAGTCCTTCAGGTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25945 AAGGCATGTCCTACCTGCACAGCAACATGATTGTTCACCGGGACATCAAGGGAGCCAACA Gene GeneID:508943|MAP3K3:XM_002696094:147_cdna UTR3_Alt 2 NULL GeneID:508943 19 GENE MAP3K3 NULL mitogen-activated protein kinase kinase kinase 3 EMBV3_35414 CTGTGACTTTGTCTGGCTTCGGCTGCCAGGCTTTGTTCGCTTCTTCAGGTGATGACACCT Gene BVT0101_073981 - 1 EMBV3_22240 GK000014.2:46354139-46644558 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056439 1 XLOC_034242 NonCoding TCONS_00056439 XLOC_034242 NonCoding NonCoding - 14:46380533-46380732 - TSS42116 199 1 0 0 0.000252473746011168 0.000139507586291952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000469791906155846 0 0 0 0 3.48163949947337e-05 3.54044449013901e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.0425136749126575 0.781117484729892 -0.0129978654664248 0.784743413245976 GGAGTTGAAATATCACACTTTACTGTCTCTGATTCTTTTCCTGAGTTGACCCTTCACAGCGATTAAATATGTCTTTTTCCTGAACAGCTGTGACTTTGTCTGGCTTCGGCTGCCAGGCTTTGTTCGCTTCTTCAGGTGATGACACCTGAATTCTGTGCCAAGGTGCACATGCCCTCGTAGACAATGTGCTTTCCACTAC TCONS_00053441 TCONS_00053443 . 5' 26318 TCONS_00053441 TCONS_00053443 . 5' 26318 EMBV3_17840 AAGGGGGCTCCGTGGGCTCTGGTTGGCCAGGCCGGGGACACCGCTGAGGCTTCCCCAGGA Gene BVV0102_121095 + 0 NULL GK000029.2:51461958-51504193 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38515 GTTCAGTTGGCATCACAGAGGACAAAAAGACAGGGTTAAAAATGAGGAACTTTTACCTTT Gene GeneID:518288|P4HA1:NM_001075770:323_cdna Constitutive 2 NULL GeneID:518288 28 GENE P4HA1 MGC137838 MGC159694 prolyl 4-hydroxylase, alpha polypeptide I EMBV3_25382 GTATGACTTACGCTCTCATCCACTTTGCTATTCCACTATTCCCAATGGGTTTGCTGAGGC Gene BVV0102_071189 + 0 NULL GK000023.2:21840386-21938478 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01779 AAGGCACTGACACCCGGCTTTGTGCCCAATAAAGGGAGACTGAACTGCGATCCCACATTT Gene GeneID:529134|STK32B:XM_002688424:52_cdna Constitutive 0 NULL GeneID:529134 6 GENE STK32B NULL serine/threonine kinase 32B EMBV3_15832 GTCTGTGGTGATGACGGCCAGACATATAACAATCCCTGCATGCTCTGCCATGAAAATCTA Gene GeneID:526637|SPINK5:NM_001102102:64_cdna Constitutive 0 NULL GeneID:526637 7 GENE SPINK5 MGC159895 serine peptidase inhibitor, Kazal type 5 EMBV3_41797 CTTCTTCAAGGAGCCATAGTGTTGGCTTTGACAGACCAAGCTCCCTAATATCACACTGCT Gene BVV0101_023131 + 0 NULL GK000024.2:50460420-50684777 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23160 CTCTTTATTGGATCAGGGCCAGGAAGCAGAACAGTCCAGGCAGCAGACCGTTCTTTGCAA Gene GeneID:537625|LOC537625:XM_002690081:8_cdna Constitutive 0 NULL GeneID:537625 9 GENE LOC537625 NULL similar to chromosome 6 open reading frame 204 EMBV3_42059 GAGAAGAACATGCCAGATGAAGAGAAAAAGGTAAACTAAAAGATCTTGGGAACTTGGTTC Variant GeneID:504602|TTC1:NM_001034217:10_cdna 428^842 2 EMBV3_31020 GeneID:504602 7 GENE TTC1 MGC128644 tetratricopeptide repeat domain 1 EMBV3_11117 GCTGCATTGTCTGGCCACAGAGTTGAAATCCCTCGTGGTCTTGATAACCCTGCTTGGAGA Gene GeneID:522718|SLC22A14:XM_002696915:435_cdna Constitutive 0 NULL GeneID:522718 22 GENE SLC22A14 NULL solute carrier family 22, member 14 EMBV3_20760 CAGCAGCGCCAATGGTGAAGATGACCAGATCCAAGACTTTCCAGGCTTATCTGCCTTCTT Gene GeneID:616180|YPEL2:NM_001079510:63_cdna Constitutive 0 NULL GeneID:616180 19 GENE YPEL2 NULL yippee-like 2 (Drosophila) EMBV3_39729 CTCTTCCTAAGGGGGGAAAAGCAACCCTATAAATGAACTTAACACAGGGTGACTTTCTTC Gene GeneID:785125|ZNF140:XM_002694443:19_cdna Constitutive 0 NULL GeneID:785125 17 GENE ZNF140 NULL zinc finger protein 140 EMBV3_05238 TCTCTGCACTCAGACCCTCCCTATACCATTAGGAGACGCAGGTTTCTTTGCTGATGTGCA Gene GeneID:617849|MSRB3:XM_002687541:531_cdna UTR3_Alt 2 NULL GeneID:617849 5 GENE MSRB3 NULL methionine sulfoxide reductase B3 EMBV3_20226 AGGTGCCAAGCGAGAAGCCCAAGAAGAGGTACCGGAAGAAGCTGAAGAAGTATGGCAAGA Gene GeneID:618454|LOC618454:XM_002693953:129_cdna Constitutive 0 NULL GeneID:618454 16 GENE LOC618454 NULL similar to Uncharacterized protein C1orf115 homolog EMBV3_35251 ATCAGAGTAAAAACTCCCCAGACCAGCAGTCAGCAAGAATAGACTTCTAGAGCAGGGGCG Gene GeneID:509481|HAO2:NM_001035071:41_cdna UTR3_Alt 2 NULL GeneID:509481 3 GENE HAO2 HAOX2 MGC128394 hydroxyacid oxidase 2 (long chain) EMBV3_28740 TGAGACTCTGAGCTTCCACTGTAGGGGGCACGGGGTTGAATTTCTGGTTAGGAAACTAAG Gene BVV0102_344301 - 1 EMBV3_14160 GK000005.2:113420038-113437813 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11078 GTAACAAACCCACTTGTTCATCTAGTTGTGAGCCCTAGTGCTGGCTCAGTGCTTGGCAAC Gene BVT0102_243032 + 0 NULL GK000014.2:71419795-71515115 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052227 TCONS_00052228 TCONS_00052230 TCONS_00052233 TCONS_00052232 TCONS_00052226 TCONS_00052229 TCONS_00052231 1 XLOC_031408 Coding TCONS_00052231 XLOC_031408 Coding Coding C14H8orf37 14:71396809-71421924 = TSS38793 2970 1 TCONS_00052231_1 207 0.0430976430976431 6 0.881978179501473 0.00119320342450037 0.00201551328223396 0.00175463036387852 0.00132266385038651 0.00149308097087892 0.000394261541123199 0.00104654122754056 0.00150729220499452 0.00114956704819926 0.000136196498608606 8.63260762158849e-05 2.78476788501081e-05 0.000317651600054641 0.000516613212566536 0.000383675522597724 0.000837981331390185 0.0007766536143441 2.24855031296413e-211 0.00162998243868089 0.00152954396203896 0.000674122670237987 5.96386372962805e-91 0.000177729063271325 0.000307499826443846 0.00142223696808318 0.00201016120449115 0.00116448270217431 6.79150416739485e-05 3.10561159049298e-05 3.23889284224744e-05 XM_866332.6 C14H8orf37 PREDICTED: Bos taurus chromosome 14 open reading frame, human C8orf37 (C14H8orf37), mRNA. 0.0 5357 100.00 0.9996632996633 NM_177965.3 C8orf37 Homo sapiens chromosome 8 open reading frame 37 (C8orf37), mRNA. 0.0 1388 75.92 0.663973063973064 TCONS_00052231_1 sp|E1BC52|CH037_BOVIN CH037_BOVIN Protein C8orf37 homolog; 5e-155 432 100.00 0.995169082125604 1 noncoding 1 0 1 0 0.00085416969362917 0.99379794445652 0.00352315849999256 0.941389894652393 ATACAAGATGGCGGAGGACCTAGACGAGCTCTTGGATGAGGTGGAGTCCAAGTTTTGCCGACCAGACCCACTGAGACTGGGTACGGTCGAGCGGCCCAGAGGCGGCGGAGGCGGCTTCTTCGGCCACGACCAGAACCGAGCCGAGGCGAAAGAGAATCTCAGATCAGCAGAAACATTTGAAAAAGAAGATGATCTTGACAGTCTCATTAATGAAATATTTGAAGAGCCCCACTTTGACAAAAAACACTTTAAATTAAAATCTAAATCTTCAGGTAACACATCTGTCAGAGCTTCCATTCAAGGCCTTGGTAAAAGCTGCAGTCCAGTGTACATTGGCGGAAGCACCGTTCCGTGTGGGATTGGGACAAATGCTTCACCAAGAGCATGTGACCATCTGCGTTGTACAGCCTGTGATTTCTGGGTAGAAAGCTACGATGACTATAGGTGGGACAAATCATGTGATTACCTGTTTTTCAGGAACAATATGCCAGAATTCCACAAATTAAAAACAAAGCTGGTAAAGAAGAAAGGAACACGAGCATACGCCTGCCAGTGCAGCTGGAAAGCTGTTGAAGAACTGACTGACCTTCAGACCGACCATCAGCTTCGCTGGGTTTGTGGCAAACACTAAGGATCCAGACGTCCTACATTCAGACAGCTGCACCCATGAGAGCAGTCTCCATTCATCGCCACGGTGTTTCGGTAAAGGCACATAGTGTCGTGCCCTTGGGAAAAGACAAAGTTCCATTTAATGGCTGTACAAATTGTCAAGGACTAAATGGACTTGGGAGGATAATGTGCTTTAACATTTTGGAATTATTCATTTTTGATATATGAGCATTTCACTTAGTAAGGTAACAGGTTATCCAAATACTTCTTTGCTAGGCTGTCTCCTGGAGTTTCATACAGATATATAGCCATTCACTAGTAATTGCCATACTCCTGACTGCTAATACACTTAGCATGAGTATTCCTCATTACAGAAGTTACAGGGGATAAAGCAGACCTTTGGCCCTGCAGAGAGGTCACTGAGAGGGGTATACATCACCTGCTCTGGTCAGATCTGCTGTTAGCAAAAATAATAATTTAGGCATGTCAGAATCCATATAGTCAGTGACTGATGAAAGGGTTTTCAAGAGTGTGGGCGAACTGTAGGTGAAAACACTGCCTGTGTCTGATGTTACTTCACAAACTCAAAGCAATTCTATGCACAACAGTTAGTATATATTACCAGTTTTAACTTATTTCTCCTCCTTTTGTTCATTTAGATATCAAAAGGTATCTAGTTTGTGTTTTAGCAAATATTCATTTCTATATTAAAAAAAGTTGTTTTGATGCACCTAAAACTACAAGGAAAAATCCTGATACAGATCATTGCTGGATTTACCAAGTACCTTCTTGCCTTTAATGCCCTAAAACTCCATTAAGTAAAGAGAACAGCAAGTAAGATATGAGAACAGCAAGTAAGATATTTTCTCAGGCAGCCTGTTGATTTTTCTGGTAGGATCAGGTTGACATGCTGTTCATTAGATAACTACATGAAAAGAGAAATAAAGCATAGCTGAACCAGCAGGTAACCTGTTGGGCTCCTTAATATGACTAAGACCTGAGGAATCCTACAAAGCAGCACATTTGGAAAAGCGGTTACCTCAAAATTACCAGCTCCCAGCCTCATCAGGAGATTCCAGTTTGCCAGACGCTCTTCACCCCATGTGTCTATTATGCAGTTCAGATATGTGACACAAGGCTTCCTTAAAGGGAGTAACCAAACACAGTTATGATCTGTTTAGTCTTATACTGAATCTGTTCCAACCATTTTACGCAAGCAAAGAAAGATCTGGTCATTAAAATCCTTTTCCTAACCGTGACACTTTTGCATATGTGTATAACTTGCTCTAGTAAGTCTAGTATTCTGATAGGATACCTCTCACTGGCAGATGCTCACATTCTTATATTAAGGATATGTTTACAGATCTTATCTTTCAATAAAAGTGTTTTATCCTCTAAAATTTTATCAGAAACATAGGAGGATCTGGGTTAAATTGCCTATTGCAAAAAATAGCAGAGCACCAAGATCCCCACATTCAGGACCTCATGGAATTTGGCACTTTTAGTCATAATGGTGATTTTTTTTTTAATTTAAACGAGCAAATTTACTAAATTATGGGTTTTAATTTTTTGCTTTTATTATTTCATTATAACTATTCTGTAACTTAGATATATTGCCCATGTTTAGCAGTCCGTAACATTATAGTTATAATAATTAATTCCCCAATGTCAGAACTGTGTAAATGAGTTCATATTTTTGTTGGCAATTTATTTTATAAGCTTTTTAATATTGTATAATCTTTAATCTAAAATGTAGAAAGTATATGTTTATATACAAATGAGTAGACTAGTACCAGTTGTATCTTATTAGCCAAAACGCAGCTACTTTACTGTCAATGTAGAAGAGTGTAGCTTGTAATCAATTATAATTTTTAAATGCAAAGTCTATAAAACTTTCAAGATGTTTTGCCCATTTGTTTTCAATATTTATAATAATTTTCTACTACCTTCAAGTATCTTATTTTTTTAATTAAAGTTTTATTGAAACACAGTATGTAACAAACCCACTTGTTCATCTAGTTGTGAGCCCTAGTGCTGGCTCAGTGCTTGGCAACATGGGGGCTCTTCGTTTCTGGCTCAGGGATCAAGCCTGAGTCTCCTGCATCACATGGATTCTTGACTGCTGGACCACCAGGAAGGTCCCAGCAAGTGTCTGTTTCTTATCAAGCCAGGTAGCTACTTTATTTGAACTCTGTTGTACTCACATACCTTTATCTTGCCCAGAAGTAAATAAATAATAAGTAGCTTTACTCTGTATTTAGGTGTATTTTTTTTGTTTTATAATAAATATTCAAATGGGGATTAATGTGATATAATTTTGATAATTTCCTTTAAAATATCAATTAAAAGTTTTGAGCCGTC EMBV3_27876 GCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTCCTTATTAGGCCG Gene GeneID:782812|RPS15A:XM_002684792:142_cdna Constitutive 0 NULL GeneID:782812 1 GENE RPS15A NULL ribosomal protein S15a EMBV3_13666 ATAAACCATTTGCTGTATAGACTTCCCTGGTCTGCAACATCTCCACCGACCCCCCAGGAC Gene GeneID:518260|RTF1:XM_002690797:1_cdna Constitutive 1 NULL GeneID:518260 10 GENE RTF1 NULL Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) EMBV3_07602 TGCGCACTCAGGCTTCAAGGCCAAGCTGGTGACATTTCTGAGCCGAGAGCGGAAGAAGGG Gene GeneID:514894|DOK3:XM_002689034:99_cdna Constitutive 0 NULL GeneID:514894 7 GENE DOK3 NULL docking protein 3 EMBV3_04973 GCAGAAAGGGGATATAAAGTCTCCGGTGCTAAGGCACAGATGGTCGAGACAAAGGTCACT Gene BVV0102_210183 - 1 EMBV3_02421 GK000007.2:60998969-61042754 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179596 TCONS_00102424 TCONS_00013240 TCONS_00243948 TCONS_00098385 TCONS_00098275 TCONS_00099834 TCONS_00252294 TCONS_00154811 TCONS_00169479 TCONS_00185628 TCONS_00174545 TCONS_00105301 TCONS_00025106 TCONS_00025108 TCONS_00230483 TCONS_00252175 TCONS_00174542 TCONS_00172905 TCONS_00202431 TCONS_00174541 TCONS_00056222 TCONS_00207060 TCONS_00240487 TCONS_00132257 TCONS_00013239 TCONS_00174540 TCONS_00169645 TCONS_00174543 TCONS_00039773 TCONS_00066485 TCONS_00221594 TCONS_00161883 TCONS_00102423 TCONS_00174544 TCONS_00110376 TCONS_00140494 TCONS_00169477 TCONS_00171161 TCONS_00013237 TCONS_00088693 TCONS_00152796 TCONS_00137852 TCONS_00008712 TCONS_00226267 TCONS_00029929 TCONS_00243949 TCONS_00000314 TCONS_00248788 TCONS_00222044 TCONS_00135546 TCONS_00169478 TCONS_00252807 TCONS_00154809 TCONS_00226268 TCONS_00094939 TCONS_00164253 TCONS_00107398 TCONS_00154810 TCONS_00171162 TCONS_00117782 TCONS_00013238 TCONS_00154253 TCONS_00174546 TCONS_00202430 TCONS_00154812 TCONS_00187310 TCONS_00130398 48 XLOC_109368 XLOC_061863 XLOC_008038 XLOC_150314 XLOC_058631 XLOC_058521 XLOC_060077 XLOC_155235 XLOC_094549 XLOC_103372 XLOC_111681 XLOC_104638 XLOC_062534 XLOC_014669 XLOC_139973 XLOC_155116 XLOC_104243 XLOC_123974 XLOC_034025 XLOC_125579 XLOC_147151 XLOC_080738 XLOC_103408 XLOC_023590 XLOC_041198 XLOC_134908 XLOC_098768 XLOC_066280 XLOC_085141 XLOC_103753 XLOC_053479 XLOC_092561 XLOC_084061 XLOC_004269 XLOC_137960 XLOC_016184 XLOC_000088 XLOC_151731 XLOC_135353 XLOC_081769 XLOC_155748 XLOC_057600 XLOC_100173 XLOC_063308 XLOC_071948 XLOC_094013 XLOC_113358 XLOC_079107 Coding TCONS_00179596 XLOC_109368 Coding Coding - 3:99968921-99976242 - TSS134355 7321 2 TCONS_00179596_16 405 0.995082638983745 1 0 2.2899730733807e-05 2.87794733106343e-05 1.46660483268652e-06 6.61670287463767e-07 1.53646147036544e-06 6.28636240086872e-07 5.72528955562941e-06 1.21959670911563e-05 5.74881503638329e-06 0.000780002652451121 0.000524875399509416 0.000765542978596544 0.000139250951259028 0.000374871407518322 4.26007064693583e-05 0.00240846066750101 0.00195592431671475 0.00489058798563395 1.09503770484616e-05 4.87551939026511e-06 1.22570456212253e-06 0.0026724491859505 0.0033515583835469 0.00270820785064512 1.27136386568317e-06 4.52394845141639e-06 5.25248538403041e-06 0.00182989328022288 0.0018967866127545 0.0033944148952754 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2479 90.46 0.246414424258981 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 6e-08 66.2 69.48 0.0208987843190821 TCONS_00179596_12 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 2e-25 110 28.41 0.723287671232877 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACACATAAAAGGAAGAGCCAAAGCGCTCTCATGGACTCTCTCTCCTGCGTTCATGCGCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCTTAAGAGCTGTAGCATGGTTCCAAGACCCAAGAGCTGTGATGCGCTGAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACATACACTCGTGTGACATCTATGGTGCCGTGACTCGGGTTTAACCTGGCTGAAACAACCTTTGCGCAGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGCAAAACTCCCGCACTAGAAGTGGAAAGCGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACTGGGACAGTGAAAATAGAACTCAGCAGAAAGCTCACGTGGCCCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGTAAGAGGTCCTTGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCATTTCTTGTTTCCTCAAACCTCCCACAAACAGGCAGGCAGCAGGGGAACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGGTGGGGGTTCTTCTGTCCTTTATCCTGTGCCAAGGATCAGACCAATAAAATTATGAGGACCGGTCAGATATTTAGCAAATCTTCCAGTGGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCTGGCTAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAAATTTGTTAGGATCCAGAGAGAAGCCACCCTTCAGGGTGTGAACTGTTGGCAAGGTCAAGGGCTGGGGCCATGGAATTAGGCCGGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATAAGTGAGAGGACCATCCCAGCCATTGGGGAACCACCCACTCATCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTAGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACACTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCTCTTCCCTCCTGTTTCATGCTCTTTTCCTGATCCCCATCCAGACCCACAAGCCTGCCTCTACAATCTTCTGGAGAGACAACCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGGATGCCCAAACTCCAGTCCGGGGGGGTCCCAGGAGGTCATCACACCTTGACCTGCCTAGAGATCAGTCTTCGAAAGGTTGTCACACCTTAACCTGTTGGGGATCCTCTAGTCCGAGGGGTCCCATGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGCCATCACGCCTCGACCTGCCCGGGGATTTGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTACACCCTGACCCAGGGACACCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAAAAGATTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAACCTATTACTCGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCATTGCCTTTCTGGAGAGGTTAAAAGAGGCACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGATAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGACAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAAAAAGAGACAAGGCATGCTCAGATGCTGGCCGCCCTCCAGAAAAGCCCTATGGCAAACCCAGAGTCCTTGAAGGACAAGGCACAAGACAAATGCCTAATCTATAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGCAGCACTCTGCCCTGGGGACCCAAGAGCCTCAAGGTCAAGAGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGTGGCCTGCTCCAGCCAGCCCGCCAGTCACAGATAACCATCACGGGGCTGGAGCCAAGAGTGCACCTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTCCAGGAAAAGCAACTACTAAAAGATTGACCTGAGCACTTCTTTGTTGCTGGGATGGACAAATTTTCCCATCAGTTTCTGGTGGTCCCTGAGTGTCCTACTCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAATCCATTACACCTTCAATAGAGAGGGGCCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGCCCACCAAGCTGAACCAGTCATCATTATCCTCCGAGACCCTACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGGCTCAGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGTTTGTGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGAAAACAGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCTATCCCACAGTACCCAATCCCTACGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACTACTGGCTAAAGAATCCCAATATCGTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACACCAACAGATGACTTGGACGGTATTACTTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGAAAGGCCCTTAGCCAGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGTACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCAAAAACAATTGCGAGCTTTCCTGGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGATGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGTCTGTAGCTTACTTATTCAAGAGGCTCGATCCAACTTCCCAAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATTGGAGAGGCCATTTATGGATGTCTGATCAAAGAATTCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCAGGTATGCAGTAGTCTCCAATTTTGAGACCACAGAGGCTAGGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAACTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATATCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCAACTCTTGGAGGCAGTCCATCTGCCCACTGAGATTTTCAGTCTCCCACTGCAAAAGACACCAAAAAGGGAGCAGGGAAGTGACACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTAAGAGACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATATCGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCTTCCAAATATTACTAGAAAGGTCCTTCAGAGGAACAGGCGTCCAAACAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACATGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGACATATACATTCACAGGATGGATTGAAGGCTTTCCCACCCAGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCTAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGTATCGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAAGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGCATTGCCTCTGAGGAACAGGTTGGTCTTAGTCCTTATGATATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACACTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAGCCCACATGGAAGGGCCCCTACCCTGTAATACCTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGACACCTATTCAGAACTACCAGTGAGTGCCTTCTAATGAACACCCCCAAAATCTGGTTTCTGGGTATAAAATTTCTCAGGATAACCCTAAAGAGCCAACACAGCTTGACAGATACTGTACTCCAAAACAGAGAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCCATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATACAAAACTACAACTGACCACGGAAAATATCACACACCCTTGGACACTGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAAGGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGAAAGTAGCCAGAAAGACCTCGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATTTCTTGAGGGGGGAATATTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCAAGGACCAGAGTGAAGACTTCAGGTAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATTAAAAGGAAGAGCCAAAGTGCTTTCTCATGGACTCTCTCTCCTGCGTGTGTGCGCTCTTCCTCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATACAGCTGTAACACTGATTTACTTAAGAGCTGTAGCATGGTTTGTCCAAGACCCAAGAGCTGTGACGTGCCAAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGTAGGAAAGTAGGATACATGTTTTGAGTAAAAAAGGATTTTTATGCATGGCTGGGCTGAGATTAGGTTAAACTTATTCAGGTAAATGGATTTTGTTATTAAAAGTAGACTGGTGCAGGACTAGATTTGGTTCCTCTATTCTAAGAGAACATGTTTACTTAGAATGCTGCTTTTGATAAGATTGTATGAACTTGCCTTTAAGTGATCTGTATTTGTTTTTAAATAGTCACAGTGACCTATGATTCTATCTGACCAAATATTTTTAAAACTTTTTGATATTTTTTATGCACTTCCTATCAAATTCTAATTAAAGTTCTTTTGACTTCAGCTAGCTTGGAGATGCTTCAGAGGGCCCTTCAGAAAAAAATTTAATATAATTTAAAACTACATATATTCATATTAAACTGGCTAGAATTGGTTGATATGTTAAATTACACAGAAGTCAGTGAATGATCAGCCTCCTCAGATTATATGTTATGAATAAATTTTATTAATACAGACATTCTAGAAACTA TCONS_00174208 . 5' 11514 TCONS_00174208 . 5' 11514 EMBV3_27328 GTGCAAGGAGGAACTTGGGCAACCTTTAAGGACTGGAACTCATTTAGTCCTAGGTCAGCC Gene BVV0102_023210 + 0 NULL GK000003.2:27345762-27378642 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28869 GATTCTATTTATGAACAATGTTATTTCAAACCATCCAGTGTTATGCTAGAAGAGGACCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07882 CTGAACCCAGGTCTCCCTTATTGCAGGCAGATTTTTACCAGGGAAGTCTGTTTAGCAGGC Gene BVV0102_019479 - 1 EMBV3_02001 GK000001.2:11161307-12795328 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29514 GAGGCAGAGGTCACGGAGCTCAGAGAACAGGCTGCAGCCACAATGGTCAGGCCTATGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19708 CCATGAGTACGAACACACTGAGCTGCAGAAGGTGAACGAGGGTGAGAAGGTCTTTGAAGA Gene GeneID:523327|RSPH9:NM_001046267:297_cdna Constitutive 1 NULL GeneID:523327 23 GENE RSPH9 C23H6orf206 C6orf206 MGC137196 radial spoke head 9 homolog (Chlamydomonas) EMBV3_28599 GTATCAACCTCTGCAGGATGCCTGAGAAGAAACATGGAAGAGGGTATAAAAAGAGTCAGG Gene GeneID:788423|LOC788423:XM_002707750:23_cdna Constitutive 0 NULL GeneID:788423 18 GENE LOC788423 NULL similar to mCG142610 EMBV3_30623 ACAGTGCTCAGAGAGGTTGAGAATCTTGCCCAGCGTCACACAGCCAGTCAGTATCATCTT Gene BVV0102_212029 + 0 NULL GK000002.2:121616755-121636111 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11155 TTCACTGACTGTGGCCGAGCAGTACGTCAGCGCGTTCTCTAAACTGGCCAAGGACTCCAA Gene GeneID:510324|STOML2:NM_001038068:38_cdna Constitutive 0 NULL GeneID:510324 8 GENE STOML2 MGC134600 stomatin (EPB72)-like 2 EMBV3_20517 CTAGCCTGGCACCTGGACTGTGCCCCTCCATAGCTGACAGATTCCAACAGAAGTGTATTT Gene GeneID:513906|DDX6:NM_001143867:110_cdna UTR3_Alt 2 NULL GeneID:513906 15 GENE DDX6 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 EMBV3_16474 GGCGCCGGAGCCGCGCTGCCTCTCGGGTGGCCTGGGTCGGTGGTGAGCGCGGTGCTCGCG Gene GeneID:614161|ARF6:XM_002690863:248_cdna Constitutive 0 NULL GeneID:614161 10 GENE ARF6 NULL ADP-ribosylation factor 6 EMBV3_00704 TCCCTGTCCATCCAGTTTAGAACAATTCAGTTTGGGCTGTTTTATTCAGAGCACTTCTCC Gene BVT0102_169933 + 0 NULL GK000001.2:66071883-66213611 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11571 TCACCATTGGTATCATTATTAGCACCATCCCCAAACCCCATTCCCATTCTCCCCGGAGTG Gene GeneID:535858|VIPR1:NM_001081607:170_cdna Constitutive 0 NULL GeneID:535858 22 GENE VIPR1 MGC155293 vasoactive intestinal peptide receptor 1 EMBV3_12602 TTTGGCTGTGCTGGATCTTCATTACTGCAGGGCTTTTCTCTAGTTGTGGCAAGCAGGGTC Gene BVT0102_197269 + 1 EMBV3_23376 GK000010.2:30527331-30916468 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013374 TCONS_00013376 TCONS_00013375 1 XLOC_008107 NonCoding TCONS_00013375 XLOC_008107 NonCoding NonCoding - 10:30720219-30732862 - TSS9948 2449 1 TCONS_00013375_5 201 0.347080440996325 3 0.806517956019617 0.000595544572747655 0.000848805138622424 0.000277449457805801 0.000154789268851925 0.000426382948749296 0.000334408017683421 0.00025446197093999 0.0004587525563003 0.000107925415658789 2.92205409448776e-09 0 0 1.28863594169248e-05 2.99132057371653e-09 3.24310681505018e-09 0 0 0 0.000633975028341764 0.000744529928187863 0.000338631563648732 0 0 0 9.8379559023077e-05 0.000218030673834735 0.000833143363529468 0 3.03985269466256e-09 3.8376891217155e-09 NM_001102188.1 SGCB Bos taurus sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA. 4e-169 600 90.13 0.180481829318089 0 noncoding 1 1 1 1 -2.33120419194528 0.03796698752289 0.0125277105832972 0.87945478096033 CTGTGAGTGAAGCAGGGCCTGGTCAAGCAGGGAATGCACAGAGAGCAAGAGAACAGTCAACTTGAGTGTCCTGACCATACAGCAATGCACACTAGAGAAGAAGGAGACCCAAATGGTGGTGCAGGTTGGTTGTCTTCAGAGAGCCTTCTCCTTGCTTGTACGAACACAGTCATCAGATCTTCTGGAGTTCTGTTTAAATCAGGTGAAAAGGAAAACCACAGCAATATTTTTCTTTTGATAAGAATATATCAGATATACTTCAAAAACTCAACAGCCTATTACTTTTGAGATGATCTTAGGGGATTCTAGTGGCTCAGTGGATAGGAGTCTGTTTGCCAATTCAGGAAACATGGGTTCGATCCCTGATCTGGGAAGATCCCACATGCTGTGGAGCAACTAAGCCTGTGGACCACAGCTACTGAGCCCCTACGCTCTACAGCTTGGGAGCTGCAAATACTGAGCCCATTTCCCCTGGAACCTGTGCTTCTGCAGCAAGAAAAGCCACTGCAATGAGAATCCTGTGTACCACAACTGAAGAGTAGACCCTGCTTGCCACAACTAGAGAAAAGCCCTGCAGTAATGAAGATCCAGCACAGCCAAAAATAAACAAGTAAAGATTTTTTTAAAAAAGATGATTTTAGGCAGAAAAAAGATTTAAGGTGACATATAGTTGAGGTGCTAACACTCAGCATTTAGGTCCCATAATTCCTTTGAAAAACAACTAAGTTTAATATGTGATTTTAAAAATGGTCACTGCTTTCTAAACATATGCATCTTTATTTAAACAGGTTTATATTTTGTCTCCAAAGTGCGTTATACTTAAAATACTGAGCCACTCTCTTTCAAAGCACTGTTGGTTGTTCCGTTTTTGTAGAGATCACAAGCCCACTTGATATTAGTGACTTCTACTTTCCTTTGCTTTGTGAGTGTGGGTAATAGCCTTTTTGTATACCAATTTGCTTACACTGCAGTCTATGCTGGTAATATTGTACATTGCCTGACCTCTGAATGGAAAAATAATAACAAGTTAAAACAGTCATTTTACCTGAAGTCGATAAGGCCATAACACTCACCCTGCTTTCAATTCACATGCTCAATTTTCATCCACTCACTCTCGACTTTGAGAGGAAGGAATAATGACAGGTTACAGGCACTTTATTTCAAAATTCACTCACAAAGTTATTGACAAGCATTTTTCACAGAAACAGCTCTTCTCTCTGACCCTCGTGAGCTGTTTACATGAAAAATGCTCTTCCTTGTAGATTAATGAGAGTGGAACCTAATTCCATACCAAACATGTAGCAATTGCTTTAGCATCGCTGTTTTTGATATGGGAACAAAAATAGGGATAATTTGCCTCAAATTGCAGTCACTTCAGTCATAATAAAATCTCAGAGAGTACTGTTTGCTTTCAACTTTCATTAGGTAAGCTGGGGCTGTTATTAAGGTACCAACACATAAATGTTATATTAGCACTTAACAGAAGCATAGCATTCTCCTCTAGGAGATAAATTCTACCCTTGTCAATATAATTCCTCACTGAGTGCAGTAAAAGAGTTTGAAAAGATGAAATAGTGAAGCTTTGCACTAGAGGAAAAGAAATACCTTGTTCACTCAAGCTTAAAGGCCATTTTGCTGGCCCAAGGTGCTAGGGTACTGTTTAGAAAATAAGTCTCACAGAAACCCTCCTAGGTCAAGCCAAACATTGAGACAAACTTTCAGACATGCTCTCTTTGTCCAAGGTTGTTAAATCAGTTACTTTAAATTTCTGAATGCCTTCAAATGGCATTTCAACTCTGTGAAGAAATATAAGAATTTAAGACCAAGATGGATTTCATTTCCAGAGAGCAAATGATAATCATTTTGTGTAAGCCACTGTACACACAAAACCCACATATTTCTTTTCCTTTTGAGTGTAGTAAGTTCTTTCAAAATGTAAGGTATTGTGTATGTCATAGTGGTGGAGCTGTTAAAATTAAATCTGCCTTTATCCTTACTCTTCAGTTCAGTTCAGTTCAATTCAGTCACTCAGTCATGTCCGACTCTGCAACTCCATGGACTGCAACGTGCCAGGCCTCCCTGTCCATCACCAACTCCCAGACTTTACCCAAAGTCATGTCCATTGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCTTTTCCAGCATCAGGGTCTTTTCAAATGAGTCAGCTCTTTGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTTCAATGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCAATGTTCAAAAGGATCAATTCTTTGGTGCTCAACTTTCCTCACAGTCCAACTCTCACACCATACATGACCGCTGGAAAAACCAT TCONS_00016680 TCONS_00016681 TCONS_00016682 r 3' 183606 TCONS_00016662 r 5' 192883 EMBV3_36216 ACCACGGCCATTTGGTCTCAGCATCCCTGGCCCTGCCATTGCGAGTACGTGTTATTTATT Gene GeneID:616314|RAB4B:NM_001128507:754_cdna Constitutive 1 NULL GeneID:616314 18 GENE RAB4B NULL RAB4B, member RAS oncogene family EMBV3_28059 GATGCCCTAATAGGTAAGACTATAAAGCATTGGTTTTGCTAATGTAGTTTTTGATTTGAC Gene GeneID:517397|AGL:XM_002686172:334_cdna Constitutive 0 NULL GeneID:517397 3 GENE AGL NULL amylo-1, 6-glucosidase, 4-alpha-glucanotransferase EMBV3_04112 ACAAGGCGAGCACCCCTGTTCTAAAGCAGACACGATCCCACCAAATTCAGACAACAGAGC Gene GeneID:534414|NTM:NM_001017949:164_cdna Constitutive 0 NULL GeneID:534414 29 GENE NTM HNT MGC139543 neurotrimin EMBV3_14486 GGACTTGTGTATATACACATGCACATATTGCCCACCAGCTTGTTTATTGACAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_39304 ATACCACCCCCACATCTTTCCTTGGCCAGGTCTATGTCATTCAAGTTCCACTCAAGTGCC Gene BVT0102_289516 + 0 NULL GK000026.2:20403776-20465827 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01054 TTCAGCAGCTCTTCTCTCCGGATCTGTTCCTCTGTGTTCACTGAAGTGGCTTTGCACTTG Gene BVT0101_012574 - 1 EMBV3_37318 GK000024.2:29230447-29489775 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138722 1 XLOC_084718 NonCoding TCONS_00138722 XLOC_084718 NonCoding NonCoding - 24:29342082-29344413 - TSS103898 1414 2 TCONS_00138722_2 66 0.591937765205092 2 0.393991416309013 0.000673548883040258 0.000120808709656695 0.000539925643250882 0.000393478043406568 3.14247101013589e-05 1.01189665060863e-05 4.12426033508537e-05 5.43786433764032e-05 0.00118389283561493 2.61884354624157e-05 0 0 5.27592661229665e-05 9.98022356814441e-06 0 0 0 0 0.00057949009652524 0.000745928091753068 0.000990619947189167 0 0 0 0.000650872571428329 0.000176884039249149 0.000555252561671282 0 0 0 XM_005197460.1 LOC101908419 PREDICTED: Bos taurus secretory phospholipase A2 receptor-like (LOC101908419), mRNA. 2e-119 434 85.23 0.269448373408769 0 noncoding 0 0 0 0 -0.502892954070474 0.0364433404218725 0.0814293820209034 0.165583780181644 CCAGGTGGCTCAGTGGTAAAGAAACTGCCTGCAATGCAGGAGACACAGGTTCAATCCCTGGATCAGGAAGATCCCCTGGAGAAGGAACTAGCAACCCACTTCAGTATTCTTGCTGGGAAATTCCATGGACAGAGGAGACTGGCAGGTTGCAGTCCATGGGGTGACATGACTGAGTGACTCAGCAACAAGAACACAGCAAGGCCACTGTCAGAATTGGCTTCTTAAAATGTCAAGTGACGGCCCCGACATCAGTGGCATCGGAGGCCGCTCATTACTTCAGAATAACAGCAGCGCTTACCAGTCTCTGCTCTGAGTCTCTGCCCACCCGGCTCCCACCAGTTACCTTGACTCACCCGGCCCCACTGGACTCGTTCCCGGAAGTTGGTCACTGCATTATTCAGCAGCTCTTCTCTCCGGATCTGTTCCTCTGTGTTCACTGAAGTGGCTTTGCACTTGGTGGGGTGGGTCAGGGGAGGAGGCAAATATGAAAAGGTTTTATTTTTATTCAATTGTCACTTTAAACTGTGTTCTGCAGACTTGCTCCTTCATCCCCTGATACCTGGAACAGCGGTCCATTCACTGGCCTCTGTTAAAATCCGGGCCACTGTGCTTCAGAACTCTTGTCATGACTCTCTTTTTGGTTCAGGAGTGGTGCTTGACTCTAGGGAGCTCCACGTGCTGTGGGAAGGGGAGTGGTCTTCTCCATCTCTCCCTCCCACCTTCTCCCTCTTGGAGCTCCCCTGGGGTTGTGCCCTGGGTGAGAGGACCAGCCAGGTGGTGGGAGGAATTTCCTCAGCTGACCCACCTGCAGCTCATCCTCTCTTGATGTCCTGTGTGATCTCCGTGACCTGTCATTCACGTGCTGCTCTCCTCAGGAGGGAACTCTCCATTATGTGATTTCCCTCTTCAGGAGGGCAGGGTGCCATCCGCCTCCAGATGCCCTTTGTGAAAGAGAGGTCGTCTCTTACATGAACCTCTAAGCCTCTTCAAAGCCCTGGAAACCATGCTTACCAAAGATGGTCATTAACCTAGAAACTGATTCGGTTCAGTCACTCAGTCCTGTCTGACTCTTTGTGACCCCACGGACTGCAGCACACCAGGCTTCCATATCTATCACCAAATCCCGGAGCTTGTTCAAACTCATGTCCACTGGGTCAGTGATACCATCGAACCATCTCATCCTCTGTCATTCCCTTCTCCTCTTGCCTTCAATCTTTGCCAGCATCAGGGTCTTATTTTTCAAATGAGTCTGTTCTCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTTATTCGAATGAATATTCAGGACTGAGTTCTTTTAGGATTGATTGGTTTGACCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCTAAAGTGTCAATTC TCONS_00138720 s 3' 100188 TCONS_00138720 s 3' 100188 EMBV3_22134 GTCTACTTGTCATATGTAATTGTTACATGCATCTGGGTGATGAGGGGAGATGTGCACTTG Gene GeneID:524106|ZNF354A:XM_002689029:85_cdna Constitutive 0 NULL GeneID:524106 7 GENE ZNF354A ZNF354B zinc finger protein 354A EMBV3_31239 GCTCCCAGTGAAAGCACAGATGCTCCTAGTGAAAGTGCAGATACCCCCACCACAAGCTCT Gene GeneID:784537|LOC784537:XM_002687221:111_cdna Constitutive 0 NULL GeneID:784537 5 GENE LOC784537 NULL hypothetical LOC784537 EMBV3_08579 GGCCAAGAGGCGGAACCAACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTAGCA Gene BVT0102_271358 - 0 NULL GK000014.2:39776015-40275715 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040888 TCONS_00229354 TCONS_00248730 TCONS_00188848 TCONS_00176420 TCONS_00091551 TCONS_00135546 TCONS_00210913 TCONS_00166151 TCONS_00065232 TCONS_00196835 TCONS_00161487 12 XLOC_024702 XLOC_138849 XLOC_151675 XLOC_114889 XLOC_106198 XLOC_056325 XLOC_081769 XLOC_129423 XLOC_100989 XLOC_039954 XLOC_118500 XLOC_098376 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_24416 ACAGAGAAGATGCCCATGACTGGAGAGGTCCCCTTGATGAGTAGGGGAGGCTGCAGGAAA Gene GeneID:509963|ANGPTL4:NM_001046043:45_cdna Constitutive 0 NULL GeneID:509963 7 GENE ANGPTL4 MGC128825 angiopoietin-like 4 EMBV3_08161 TCCCATCTTGAGAATAACCACAGCCTCCCTTTGTCCACACCTTGGGCTCCATAATCTGTG Gene GeneID:504769|CYP2B:NM_001075173:541_cdna UTR3_Alt 2 NULL GeneID:504769 18 GENE CYP2B NULL cytochrome P450 subfamily 2B EMBV3_36618 AAATCTTCTCTGGGGTGGGAGACTAGGATGGGTGTGGAGGAGGTCATGGACAAGGGACTA Gene GeneID:519014|ARL6:NM_001075782:93_cdna UTR3_Alt 2 NULL GeneID:519014 1 GENE ARL6 MGC140307 ADP-ribosylation factor-like 6 EMBV3_25817 GACCCCCATGTGATGTATGTTAGGGTGATCCTGGGTTTTGGTGAAGTCAGAGGTTAGGTG Gene GeneID:504609|LARS2:NM_001077846:86_cdna Constitutive 0 NULL GeneID:504609 22 GENE LARS2 MGC142412 leucyl-tRNA synthetase 2, mitochondrial EMBV3_33817 TGCGAGTGTGAACTGTGTGTTCTGAGGGTCTTGGGTGGTATGGTGGAAAGCTGACCCTTT Gene GeneID:618296|POLR3K:NM_001046617:20_cdna Constitutive 1 NULL GeneID:618296 25 GENE POLR3K MGC137052 polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa EMBV3_17217 CATCATCATGTCTCATCGAGTCTGCTCCCTGCTGATGGTTGGGGTTTATGCCATGGGGTT Gene GeneID:617011|LOC617011:XM_002699198:77_cdna Constitutive 0 NULL GeneID:617011 29 GENE LOC617011 NULL similar to Olfactory receptor 8A1 (OST025) EMBV3_24785 GAAGATGCAGATGGTGATCTTGCAGATGAAGAGGAAGGAACTGTGCAACAGCCTCAAGCC Gene GeneID:785085|LOC785085:XM_002700041:158_cdna Constitutive 0 NULL GeneID:785085 X GENE LOC785085 NULL similar to Transcription initiation factor TFIID subunit 1 (Transcription initiation factor TFIID 250 kDa subunit) (TAF(II)250) (TAFII-250) (TAFII250) (TBP-associated factor 250 kDa) (p250) (Cell cycle gene 1 protein) EMBV3_27730 AAGCTACCAGATGATCATAAAGGCCATGGTATTTGTTGTTGACTGGCAACCAATATTTGG Gene GeneID:280682|CS:NM_001044721:884_cdna Constitutive 3 NULL GeneID:280682 5 GENE CS MGC137617 citrate synthase EMBV3_02629 GTAGCTATTAAGCAATAACAACCACCAACCTGACTTGGTCAACTTGGTTTTACTAGTGGC Gene BVT0102_108307 + 0 NULL GK000007.2:59463983-59524544 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213764 TCONS_00213757 TCONS_00213758 TCONS_00213762 TCONS_00213759 TCONS_00213760 TCONS_00213761 TCONS_00213763 1 XLOC_130528 Coding TCONS_00213758 XLOC_130528 Coding Coding RBM27 7:59405875-59467114 j TSS160056 6575 1 TCONS_00213758_5 1058 22 0.89299127992423 0.00161780350569136 0.0010221541443952 0.00102193983606923 0.000999975208438741 0.000581101911750066 0.000442649523382447 0.000134473992950305 0.000557498890189878 4.32549315706227e-08 1.13075429346351e-63 0.000199075136981307 7.95437100167993e-05 0.000440050113576548 6.13799692290031e-05 6.02811597815872e-63 0.000489720084753692 1.65613133191739e-15 0.0026534491877573 0.00102703309316249 0.00179267163382551 0.000561964645822591 2.26080495429199e-37 0.000522756268433782 0.000875353254389088 0.00139558419828892 0.00126298561925657 0.000814275216603407 5.93079566911086e-05 6.84588692062067e-75 1.7524451166153e-11 XM_005209576.1 RBM27 PREDICTED: Bos taurus RNA binding motif protein 27 (RBM27), 0.0 6845 99.92 0.577946768060836 XM_005268466.1 RBM27 PREDICTED: Homo sapiens RNA binding motif protein 27 (RBM27), 0.0 5992 89.75 0.673307984790875 TCONS_00213758_5 sp|Q5SFM8|RBM27_MOUSE RBM27_MOUSE RNA-binding protein 27; 0.0 1742 92.74 0.999054820415879 2 coding 1 1 1 0 -0.0283815761979534 0.834922458036689 -0.0582722205858571 0.319260734783488 CTTTCCTATTGGTTCCAGCGCTCGCCACTCGACGCTATCTCCCCCCTCTCCTGTGCCGTCGGGCTAGGTTGAGCGAGGGCTCTTGGGTTAGTTCCTGTTAGGCCCCGGCCGGGGGAGTAGATTGAAGTCCTCTAAGATGCCCGGTGGGCTGAGGCACCCGGAGCTGTGAAGAAGGCGTGAGGAGGCGGCGGGGGGCGACTCGCGGCAGGCCCGAACAAGAGCGGCGGCCGAGCCCGCCTTCCCTGCACCATGCTCATAGAGGATGTGGATGCCCTCAAGTCCTGGCTGGCCAAGTTACTGGAGCCGATATGTGATGCTGACCCTTCAGCCTTAGCCAACTATGTTGTAGCACTGGTCAAGAAGGACAAACCTGAGAAAGAATTGAAAGCCTTTTGTGCTGATCAACTTGACGTATTTTTACAAAAAGAAACTTCAGGTTTTGTGGATAAGCTATTTGAAAGTCTCTATACTAAGAACTACCTTCCTCCTTTGGAACCAGTTAAGCCTGAGCCAAAACCACCAGTCCAAGAAAAAGAAGAAATTAAAGAAGAGGTATTTCAGGAGCCAGCAGAGGAAGAACGAGATGGCAGAAAAAAGAAATACCCTAGTCCCCAGAAGACTCGTTCAGAATCTAGTGAACGAAGGACACGGGAGAAGAAAAGAGAAGATGGCAAGTGGAGAGACTACGACCGGTACTATGAGCGGAATGAACTGTACCGTGAGAAGTATGACTGGAGAAGAGGCAGGAGTAAGAGCCGGAGTAAGAGCCGAGGCCTGAGTCGAAGTCGGAGTCGAAGCCGGGGGCGCAGCAAAGACCGGGATCCAAATAGGAGTGTTGAACATAGAGAAAGATCAAAGTTTAAGAGTGAAAGGAATGACTTGGAGAGCTCCTATGCGCCTGTGTCTGCACCGGCTCCGAACTCTTCTGAGCAGTACTCCTCGGGGGCGCAGTCTATTCCCAGCACTGTGACTGTGATCGCACCTGCGCACCACTCTGAAAACACAACGGAGAGTTGGTCTAATTACTATAATAATCATAGCTCTTCCAATTCTTTTGGTCGAAACCCACCACCAAAGAGGCGATGCAGAGATTATGATGAAAGAGGATTCTGTGTACTTGGTGACCTTTGTCAGTTTGATCATGGAAATGATCCCTTGGTTGTTGATGAAGTTGCTCTACCAAGCATGATTCCTTTCCCTCCACCTCCTCCTGGGCTTCCTCCTCCACCGCCTCCTGGAATGTTAATGCCTCCAATGCCAGGCCCTGGCCCAGGCCCTGGTCCAGGCCCGGGCCCAGGCCCAGGCCCAGGCCCTGGCCACAGCATGAGACTTCCTGTTCCCCAAGGACATGGCCAGCCTCCACCTTCTGTTGTGCTTCCCATACCACGACCACCCATAACACAGTCAAGCTTGATCAACAACCGTGACCAGCCTGGGACAAGTGCAGTGCCCAATCTTGCACCAGTAGGAGCAAGACTACCTCCTCCTTTACCCCAGAACCTCCTTTATACAGTGTCAGAACGACAGCCCATGTACTCTCGTGAACATGGTGCTGCTGCATCTGAGCGACTTCAGTTGGGGACACCGCCTCCTCTGTTGGCAGCTCGTTTGGTGCCACCTCGAAACCTCATGGGATCCTCCATTGGGTACCATACCTCAGTCTCCAGCCCCACCCCTCTGGTCCCAGATACCTATGAACCTGATGGTTATAATCCAGAAGCTCCTAGTATTACCAGTTCTGGTAGATCTCAATATAGACAGTTTTTTTCAAGAACGCAGACACAGCGCCCAAACTTGATTGGCCTAACATCTGGAGATATGGATGCAAATCCAAGAGCTGCTAACATTGTCATCCAGACTGAACCACCGGTTCCTGTTTCAATTAATAGTAACATAACCCGAGTAGTTCTTGAACCTGATAGCCGGAAAAGAGCTATGAGTGGTTTGGAAGGGCCACTCACGAAGAAACCTTGGTTGGGAAAACAAGGGAATAACAATCAGAGTAAACCAGGATTCTTGAGAAAGAATCAGTATACAAACACCAAATTAGAAGTCAAGAAAATCCCTCAGGAATTGAACAACATTACCAAGCTCAACGAACACTTCAGCAAATTTGGAACTATTGTTAATATCCAGGTTGCTTTTAAGGGAGATCCAGAAGCAGCCCTCATCCAATATCTTACTAATGAAGAGGCCAGAAAAGCCATTTCTAGTACTGAAGCAGTTCTAAACAACCGATTCATTCGAGTCCTATGGCACAGGGAAAATAATGAGCAACCAGCACTACAGTCTCCAACACAGCTACTCCTGCAGCAACAACAAACACTTAGTCATCTGTCACAGCAGCACCATCACCTGCCACAGCACCTTCATCAGCAGCAGGTGCTGGTGGCCCAGTCTCCTCCCTCATCAGTACATGGAGGGATTCAGAAGATAATGAGCAAACCGCAGACATCAGGGGCATATGTTCTTAATAAAGTTCCTGTGAAACATCGTCTTGGACATGCCAGTGGTAACCAGAGTGATGCAGCACACTTGTTGAATCAGTCAGGTGGTGCTGGAGATGATTGCCAGATATTTCCAACTCCAGGCCATCCAAAAATGATTTATAGCTCCACAAACTTAAAGACACCTTCAAAACTTTGTTCAGGATCAAAATCTCATGATGTCCAAGAAGTTCTTAAAAAGAAGCAGGAAGCAATGAAGCTACAACAAGATATGAGGAAAAAGAGGCAAGAAATGTTAGAGAAACAAATAGAATGCCAAAAGATGTTAATATCCAAGCTAGAAAAAAACAAAAACATGAAACCAGAAGAGAGAGCAAATATAATGAAGACTTTGAAAGAGCTTGGAGAAAAGATCTCACAATTGAAAGATGAGTTAAAAACATCTTCTGCAGTCTCCACACCATCTAAAGTAAAGACAAAAACAGAGGCCCAAAAAGAACTATTAGATACTGAACTGGACCTTCACAAGAGGCTATCCTCAGGAGAAGACACAACAGAGTTACGGAAAAAACTCAATCAGTTACAGGTTGAGGCTGCACGATTAGGTATTTTACCTGTGGGTCGAGGAAAGACCATGTCCTCTCAAGGTCGAGGGAGAGGCCGAGGCCGTGGAGGGAGAGGAAGGGGTTCACTAAATCACATGGTGGTGGACCACCGCCCCAAAGCACTCACAGTTGGGGGCTTCATGGAGGAGGAGAAAGATGACTTACTTCAGCATTTTTCACCTGCAAACCAAGGGTCAAAATTCAAAGACCGTCGGCTACAAATATCATGGCACAAGGCCAAGGTGCCTTCTGTATCCACTGAGACTGAGGAAGAAGAAGTCAAGGAGGAGGAAACAGAAACCTCGGATTTGTTTTTGCATGATGACGACGACGAAGACGAAGATGAATATGAGTCTCGTTCGTGGCGAAGATGAAATCTGATGCGACTTGTATAATTTTTAGGAATATTGTTTAGAAGAACAACTTTTTAAAATTATTTAAAGAAGTCAATGAGCCAAAAAAAAATGTTTTTTTTTTATTTTTCTTTTCAACACAGTAGGTGTAAGGACAGCAAGTTTGCTATTTAAATACATCTCATAACTGTTCATGATATTAAAGCACCAAAGGCCTAGTGACTTTTACACAGTTGTGAAGATCCACAGGAATGACATGGATAATCTCTAGAGCCTTATTTTCCACACCACCTGTTTTTGTTTCTATTGGTGTTGGATTATGATGTAAATGACAGGGTGTTCAGAAATTTTATTTTGGATTATAATCTGCTGATAAAATTTCATTAAATGTCAAATCGCCTGGAATCTCTTAACTCTCAGCTATTATGGATGGGTCGTCAGACAGTAGGAGATACTTGTAATTAAAATACCCTTTGGCTTTCAAGAGTTGTCTTGGAAGAAAAGTAAATTTACTTTTTTTTTTATTGAGGTGGAGCCCGACTTATATTCAGTCTAAATTTGGGGGGGATTTAATATGCAGCAGTGAGTACTATTTTAGTGTTAATCATAACTGTTCTTCAGTGCTAGGCAGGCTCTGTGGTATTTCCATTCTGTCATCACATTAACTCTTCTGAACTTCTGCTACTGAGTTTTAGTTTGCTTTGAAATTATCAAGCATTGGTTCAGTTGTGTTTTGTTTTTTTTTTTTTATGTTTTCAGACTATAAAAAAGGCTTTTATCTGTTGCCCCTTTCTCATCCCCATATCCCCATTTTCTTTCTTCTGTCTTTTTATTAATAGCCTGACTTACCCATTACTGAGATAAGTGATTCTTTGGGGCCATCAAAAGTCAGTCCCCAATAAAAAGTTTAAACCAGCACCTTGATAAATAAGTGATATTTTGATGAGAATGATGGAAGGATTTGTGGGGAGAGTCACCAGCTTTTTTTTTAAGCTTCACTTCAGTTAATAGTTATGCAAAAGGGTTTAAAAGTGTCTGAAATGCTTTTCCTAATTTTTCAAGGATATACACATCTATGTTTTTATAATATGTGTGGTGTGAAAATTTGAAACCTTCTGTTGGCTTCAGAAGGTTCTTGGTGATCACCATGTCAAGGATTTTGTTTCCTGAGGTAAAGACTTTCTCACAGTAGAAACTATTCACTAAGAAATTTAAAACCATCAGGACTCTAGATTTTTTTGGCTATGAGAAATTAAATCCCACATGCTGATTATCTTTCCTCTTCTGTATATTTTCCTGGAATGATGTGTCAAACCAGGATCATTTTTAAGTTTTTATGTAATTTTCCCTTCATAATGGACTTCCTCTTTCTAGGTTATTACTATATTTCTGATAACACAAAGCTTATAAGAGAAGGAAAACATCACAATGGGGTACTAGAATAAGCAATCTTGCTCCTTCTTCCTCCATCATCTCTAATGAAATTTTCTTAATGTCTGTGGCTCAGTCAGTATATATTTTGAAAGATTCATTGTGGTGAATATTTTGAGTCCTGACAGTTTAAACGTGATAGAGGGAACAAAGGATTTATATATTTTTTGTACAAAGTTTTTTCTTAAACTGTATAATTTTGTAAATAATTTGTTTGGTTTTTTTTGTGTACTAAAACTACCAGCGTATAGATTTCAATAAGAATTGTTGTATTTTTGTATTTGGAAACTGAAAATTACAGTAAATTAATGGAGCTGTAAGAAAATTTTCAGTAGACTGACAGTTCAGCAGAATGAGATTCCTTTTCATATGATTTTTTTTTAACCTAAAATTGACATCTTATTACACTCTCAGTACAGACAGAGTTAAGGATTTGTTTGATTTTTAGTTCTTGGGGGAGATGGGGTGAAAGAGAAGGATGTTAAAGTGAAGAATAAATAGACACTTTTTCCAGTAAGTTTTTAAGCCCTTTAAAACTTAGTTTTTGATACACCTTAAATAGGACTAAAATGCTTTCAAAATGTCATTTCTAATGTTTGACTCTCAAAAATAATTCAAAATATGCATTGAATATTGGAAAATTTAAGGTTAGCATAAACTAGTTGAATGTATGTATGTTTTCCTTTAGGGCTGAGGTCCCAAACCATTAGAATTTCTCTTAAAAGCGAGTAAACATGATTTGTTTTCTTGGCATCTTCACTTACAGAAATAACACATACCATCTGAGGCAAATTCTGTTCTTTTGAATGTGTATGACATCTTTCTAAGTAGCTATTAAGCAATAACAACCACCAACCTGACTTGGTCAACTTGGTTTTACTAGTGGCTTACTGCCCAGGCTTAAAAAGGTAACCCCGGGGAATGTAGAATTTCCCTCAGTTTCTTCATGTTGTAACATTGAGAAAATATTGTCACTAGCTAAGGTGATAAATTGGAAAACGTCTTGTGGGTGGAAAAAGAAAGGTCCATGGTATGGATCATTATTTAAAAAAAAAAAAAAAGAAAAAAATCATGTGAAAAGGAATAGTGGTTCCTCTTGATGTATAGTATGCCTGTATTATAGTTTTTACAAAATTGTGAACTTGTGTAATAGTATAATAGGAGATATTGTTGAATTTCTAACTGTTTATACATTTAAATTCATATATGTAATGTTTGTTTTATCAATTACAATCTGAATTTCTAAGAAGCATGTTGACTTTTGCAATAAAGATGCAATATGGAATGGTTCACAATTGGGAAAAAAGAAAGAAAAAAACTAAAAGTTACAAATTTAAAAGAATTTGCAAAATTTATGAACCATTCCAAAAATTATAACAATCACCAAAAGAGCTGTAATTCTGGCTTGTTCTGGAAAGAAAGAAAATGTGTGTGTATGCTTGCTCGAGTGAGAATGAATGAGTGATGGATATGTATGTGTGTTTTATGTTGAGTTCATGTACATGGGAGAATGTCACTCAATCTGAATTTGGGTACCAAAATCACTGGCTATTAAATATTCAGTAGAATAACTCCTTTGATAGGTAGAGTGGTCTTGCAAACAAAAGGGAAGGGCATTAAAGTGTTACAAGTAAACTTGATAGCGTAGTTCTCTGTTCATGAATGGGTCTTGGTATCCCAGATAAAAGCACAAACTATTTTATAAAAGCAGTTATTTTAGTATTATCTTGAGGATATTC EMBV3_43290 CCCTTCCGTCACCAGCTCCCACTGTGAGGGGCTGTCAGGGGCTGCCTCACCCTCTCGCAC Gene GeneID:100139697|IFT140:XM_002697913:539_cdna Constitutive 0 NULL GeneID:100139697 25 GENE IFT140 NULL intraflagellar transport 140 homolog (Chlamydomonas) EMBV3_08656 GTCTCTCTGGGGTTTGCAACTTTCTATAAGAATTTCTTTGGGTTGAGTTCCCTGGAAGTT Variant GeneID:614700|MGC148714:XM_002692789:71_cdna 248^375 2 EMBV3_04569 GeneID:614700 14 GENE MGC148714 NULL similar to Cytochrome c oxidase polypeptide VIc-2 EMBV3_11838 CCTCCACGTTTGTGCATCTTACTCAGGGTGTTACCAGTGGTTTGGTCATCGACTAGCTCA Gene BVT0102_015048 - 0 NULL GK000022.2:54906876-54945534 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127492 TCONS_00127485 TCONS_00127487 TCONS_00127484 TCONS_00127490 1 XLOC_077662 NonCoding TCONS_00127484 XLOC_077662 NonCoding NonCoding - 22:54912453-54937562 - TSS95340 3634 2 TCONS_00127484_5 86 0.201981287837094 6 0.855504221761988 0.00102191410410598 0.000767816408888573 0.00156984802516199 0.00104951517256168 0.000573742039842486 0.000237876138725098 0.000217383119789516 1.95241144930849e-07 0.00129032289275656 7.45687491218127e-19 2.69222278752476e-20 3.74463010871494e-23 3.83337201980784e-06 6.42242863871613e-11 1.41169094876912e-18 8.62789865392767e-21 0 0 0.00103524480210997 0.000138481278095401 6.04580252414911e-14 0 0 7.57108838439674e-22 0.000624251805989253 0.000160318982766406 0.00047718369248564 4.01872008542617e-21 0 0 XM_588043.6 TATDN2 PREDICTED: Bos taurus TatD DNase domain containing 2 (TATDN2), 6e-137 493 82.73 0.135663181067694 NM_014760.3 TATDN2 Homo sapiens TatD DNase domain containing 2 (TATDN2), mRNA. 8e-104 383 77.37 0.134562465602642 0 noncoding 0 0 0 0 -1.54716964278512 0.0127144724489457 -0.157410877021013 0.0161754169426491 GAGACTGATATTAAGAAATAATTTACACGTGCAGAGCTGGGCTGATAGATTGAGAGCAGCTGCGGTGTAGGTGGGACTCGGCGAAGGGTTGGCTCCGAAGCTCAAATCTGCAGGGGAAGGAGGGGTGAGGAGACCAGAGGAAAGAAGACTCTAGACTCAAGAGCGAGCGAGTGTGAGTCTCCAAGGAGGGGCCACCTGATCTGTTTGAGGAACGCTGGGAGGTCAGTGTGGTCAGAGTCCAAGAAGCAACAGGGAGATTAGCAGGGCGGCGAGGAGGAGCCCAGACTTAGAGGGCCTTCGGCTGCTTGAATTGTGGACAAGGCCTGATGCCACGTGAAGACCTTGAATGGTGTATCTGAGAAGGCCCAGCCCGGCTCCTGTGTTCATGGCAATTCCAGGGTGAAACCAGGGTTATGCAAGAGGGCTCTCAGATGTTTTTGTGGTGTGAGACTTGAGTCCAGCCTTTGGTTCAAGGAAAGGTGTGGACCTACTTGCTCCCTGACTTTCTAGATGCTGGTCTCTTCAAAAGGGCTTTGCATCGCAAGCTCCATGGCAGCCCGTCATAGCCCAAGAAGCTCTCTGACACCCCAAAGCAGCTCTGGGCAAACAAGCGCTTGGTAGCTGTGGAAGCAGTGTGGGCCTGAACTTGTCCCAAGTGCTTTGGCAACTCTGAAACCTTCAGTGGAAAAAAGGGGGAAAGGTTTTCGAGAGGCCGCTGCAGCTGGCCGTGTCTCTAAGGAAGCCCTTGGTGATCCACTGCTGAGATGCGGAGGACGATCTGCTGAAAATCATAAAAAAATGAGTGACTCCAGACTATAAGATTCACAGGCACTGCTTCACCAGCACTACCGGGTCGTCAAGCCGCTCCTGGAGCTCTTTCCCAACATGTCTGTGGGCTTCACGGCCATCCTGACCTGCTCCTCTGCCAGCGAGAGCCGGCAGGCTGTGAGAGAGGTCCCGCTGGAGAGGATCGTCATGGAAAGTGACGCCCCCCATTTCCTGCCATGATAGGTTCTCAGGAGCGTCTGCCAGTGCGCCCACCCCGGCCTGGCTTTGGCCACAGTTCGAGAGATCGCCAGGGTCAAGGTCCTGTCACTCAGCCACACCCTGGCCACCCTCCGCGAGAACGCCTGCCGCCTCTACAGCCTCTAAGCCCAGACGTGCCATCAGGAGTCTCCCAGAAAAGGTGACGAAGGTCACGTTGCTAGGTTTTAAAATCCAAGACAAAGTGGCTGGGGCTCGACGTTTGAAATGGAGAGTGTGTAAACAGAGGGTGAGCAGCGAGCCCGGGGTGTCTTGAGTGACCTCGAGGCTGACCCTTGTCCCCATCTCTTCCCCGACCAGCGGCCTGACGAGAGGAAGGCCGTGTGAGCTAGGCCTGCGTGTCCCCCTCGAGGGTGTGTGAGAGCTCCCCGGACGGGGTGCTTCCTGAGACCTCGGTGGGCGCTCCCCTTCAGGCTGGCAGGGGTGGGGGGCGGGCAAGGGGTGCTTGCGGGGCTCCAGGGCCCTGGAAGAAGAGGGGAGGATGTGAGGATGTGGCGAGCTCGCCCGCCAGCGGTGTCTCTGCAGCTGGTGGTGTGAGTGGTCTGTGGATAAAGTCACAGCCCTTCTCAGCTAAGCGTGTGGGGGCGTGTAGCGTGGTTCCTGGTTTCTCCACTCTAAACACACCTCCCCGGTGGAACTCTCCTTTGGGGGACATTTGCCGGAGACCACTCAGGCGGAGAAGGAGCCCCTCATTTCCCTGGATGACCCTTCGGTCCGATCCTCAGTGTTACCATGTCAGCTCCCAGTCAGCACTGGCAAAAGGACCTCAGCCACTGGCCTCACTGGTTCCACTGCCGTCGATTCAGTGGGGCCAACGGGCGCTCATCATCCAGGGCACGTCCTGGCCGAGGGAGCTCCCGACAGACTGGGGGACCTGAGGAAAGCCTGCTTGAGCAAGAGGACCTCAGGGAAGGTGCTCCTACTCACAGATCCCCCAGGACTGCAGCCTACCAGGGAAAACCAACCGGGCCTGCGTGCCAGGATGAAGAGTGAGGCTCCAGTGGAGGTCTCTGCGCCCCTGCAGGCTTCCCGCAGAGTAAAGCTCACGAGGCTGCACACTTGTGTCTCCGGGTTTAGGCTCCTCGTTCCTGTTACACAGTGCACATGACCTGTGAGTGTGAAAGCTGGTTGGTGTTGGTTCTGATCTAGTTTTTGTGTGGCTGACTGGGTTGTTTTTGCTGTGCTGCCGGAATGCCTCTGTGTCTCTGCCCCCTCGCCCCCTTTGACCACCACTTTCTGAAGATAAAGTGATGGACCCATGGCCTCCACGTTTGTGCATCTTACTCAGGGTGTTACCAGTGGTTTGGTCATCGACTAGCTCAAGAATCCAAAGGTCTGGAGGCATTCTTGAATATGTATGTGCCTTAGCACAGTAAACAAGCATTCCTGGTCCCTTCTTCAAAGTTCTGCTGCTGGACTTACCTAGTGGCCCAGTGGCTAAGACTCCATGTTCCTGTTGCAGGAGGCCCGGGTTCGATCCTTGGTCGGGGATCTAAGGTCCCACATGCTGCAGAGCAGCTAAGCCCACGGGCCACAACTCCTGAGCCCATGTGCTGGAACTACTGAAGCCCGCGTGCTTTGGAGTGTGCTCGCCACGTCTGAGGAGAGTCTGTGCAGTGCAGCGAAAGATCCTGCTTGATGTGATGAAGATACCATGCGTTGCAACGAGACCCAGAGCAGCCAAATAAATAAATTTTATTTTAAAAAGAAAGTTCTGCTGCCTTTGAGCATTAACTCTCAATTTACTGCCTGGGAACACCCAGATATACTTGTGCTTCTTGGCCGTGAGAAATAGATACTTTCTTTGTTCCAGAACGGTGCAATAGGAGGAAAAAAAATTGAGGGCCCAAGGGTGTCGTTGATGACTCAGTTGTTCTGTGGGCTTTGGACTGTGAGCTCTGATGCTTCTGGGCAAACTGACTGCAGGCCCTGAAACAGAACTTCCTCCCGTCTGCCAGTGCTGCCCTGAGGTACCCTTGGACACGAGTGCTCAAGCCAGAAGTGAACGTGCCAGAGGGAGGCTCTGTTCCAGGAACAGCGAACACATTTGAAATCTGTGGCGGCCTCCTCTCGGACGCACAGCCGTTGGTTTCTGTATTTCCAGGACGTTCTTCACTCAGTCACAGCCAGACACACGGCAGCTGCATCCACCTGACGCAGCGCCAGCCTCTGTGTCTCGGGAAATCTGCTCTCGGCCTTTCTGAGGTTTCACATCCTTCTCTCTGTGTTAAGTTTGGGACCAACAGTAATCACGCTCTACTGCAAGCTCTTAGTAATGCAGGCATTTTGGTCTTTGTTTTGTTTTCAGTTAATTTATTTTTTTATTGAAGGATAATTGCTTTACAGAATTTTGTTGTTTTGTGTCAAACCTCAACATGAATCAGCCATAAGTATACATATATCCCCTCCCTTTTGAACCTCCCATCTCCCTCCCCATCCCAGCCCTCTAGGTTGATCAGATCAGATCAGATCAGTCGCTCAGTCATGTCCGACTCTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCACGTCTATCGAGTCAGTGATGCCAT TCONS_00129185 r 5' 5579 TCONS_00129185 r 5' 5579 EMBV3_30481 GCTTTCTTCTGCCAGTCGAGAGCACCAAGCCCCAGGGACCCACCCATTGAGCTTCTGGCT Variant GeneID:534606|RPUSD3:NM_001038561:155_cdna 858^973 3 EMBV3_40317 GeneID:534606 22 GENE RPUSD3 MGC133790 RNA pseudouridylate synthase domain containing 3 EMBV3_35966 TCCAACAGTCTTCTTCATGGGACACATGTGCCTTCCACAGAGGAAATCGACAGGATGGTC Gene GeneID:522372|SYF2:XM_002685769:573_cdna UTR3_Alt 2 NULL GeneID:522372 2 GENE SYF2 NULL SYF2 homolog, RNA splicing factor (S. cerevisiae) EMBV3_32795 ATGTGTGTATCAGTGACGGGGAAGGCAGGCACCACTGTGAATGCAGCCAAGGATATTCCT Gene GeneID:540041|MATN3:XM_002691518:528_cdna Constitutive 0 NULL GeneID:540041 11 GENE MATN3 NULL matrilin 3 EMBV3_11436 CTGTTTTCGAACAAACCCTACAACTACAAGCTGCCACCAATGCCAAAAGATTACAGCCCA Variant GeneID:511455|NEK4:NM_001101944:139_cdna 723^830 1 EMBV3_30916 GeneID:511455 22 GENE NEK4 MGC159441 NIMA (never in mitosis gene a)-related kinase 4 EMBV3_04983 TATGACGTCTGTCTATCGCTCTCCTTCCACAAACATGTAAACGGACTCTAACTCTCCGTG Gene GeneID:100337240|LOC100337240:XM_002697854:5_cdna Constitutive 0 NULL GeneID:100337240 24 GENE LOC100337240 NULL serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 4-like EMBV3_34004 CAATGGCTTCGAGACAACCAGAAGTGCCTGAACAGACCCAGGAGAGCATTCAGCGTTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30806 TGCGGGTGGATTTGCTGGAATGTCCATTGGTTATACCGTGTTCAGCTGCTTTGATCAGGC Gene GeneID:514943|RHBDL2:NM_001102014:170_cdna Constitutive 1 NULL GeneID:514943 3 GENE RHBDL2 MGC148990 rhomboid, veinlet-like 2 (Drosophila) EMBV3_36626 TGCTTTGGATGTGGGACGAGGCCCAACAGTGGAACTAAGACAGGTTTGTCAAGGGCTGTT Gene GeneID:505152|POLG2:NM_001075191:45_cdna Constitutive 0 NULL GeneID:505152 19 GENE POLG2 MGC143259 polymerase (DNA directed), gamma 2, accessory subunit EMBV3_06937 CGTTCTGACGAAGCCTTTCCTAAGCTGAAATAGCACACAGGGAAGAAGCAGTTACGGAGG Gene BVV0102_012187 + 0 NULL GK000018.2:36595362-36598366 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086146 TCONS_00083069 TCONS_00083067 TCONS_00083074 TCONS_00083073 TCONS_00086145 2 XLOC_052055 XLOC_051170 Coding TCONS_00083069 XLOC_051170 Coding Coding VPS4A 18:36584537-36598461 j TSS62522 2534 1 TCONS_00083069_4 437 13 0.818932701285642 0.000125712009242236 2.20586211428186e-10 0.000792165693384194 6.41983625021373e-05 0.000563234598639689 0.000562733138840086 0.000155043522444321 1.34652801538812e-114 8.65254705013919e-09 4.34584392640416e-98 4.49246467539815e-43 2.14757952939592e-27 0.000241597385947105 2.43412975317377e-10 1.21011070801505e-80 0.00139092804183872 3.07586171019759e-05 1.98675336399215e-53 5.04752855304508e-14 0.0010880665458748 5.39615419480935e-05 1.01505192281073e-35 0.000150811018231687 0.00096722825753587 9.14606746368247e-24 0.000816228732633239 0.000598872536995971 1.45816131832164e-06 1.07126826901286e-15 0.000154361563285654 XR_238281.1 VPS4A PREDICTED: Bos taurus vacuolar protein sorting 4 homolog A (S. cerevisiae) (VPS4A), transcript variant X10, misc_RNA. 0.0 4515 100.00 0.987371744277822 XM_005255891.1 VPS4A PREDICTED: Homo sapiens vacuolar protein sorting 4 homolog A (S. cerevisiae) (VPS4A), transcript variant X1, mRNA. 0.0 2066 90.43 0.59431728492502 TCONS_00083069_4 sp|Q8VEJ9|VPS4A_MOUSE VPS4A_MOUSE Vacuolar protein sorting-associated protein 4A; 0.0 903 98.86 0.997711670480549 6 coding 1 0 1 1 -0.0478683881717062 0.711761276705686 0.00867346252831017 0.902643973854155 GCCGGCCGTGGCCGCCAGAGGGCAGCCGCGCGGCTCTGGCCCGACCGCTCTGGGCCGCGCTCCTCGCTCTCCCTCGGACTCCGCTCCGGCTGCGAGCGGCCGCCCTGCCCGCGCCCAGCGCTGACCCATCGGGCCCTCCGCGCCGGACCAGCTCCTCGGCTCCCGGGGCAGGACCGAGGCCACAAGCAGCGCCGCGGGGTGTGGGGCAGACCCAGGAGATGAAATGACAACGTCAACCCTCCAGAAAGCCATTGATCTGGTGACAAAAGCCACAGAAGAGGATAAAGCCAAGAATTACGAGGAGGCTCTCCGGCTCTACCAGCATGCCGTGGAGTACTTCCTGCACGCTATCAAATATGAAGCACACAGTGACAAAGCCAAGGAGAGCATTCGAGCCAAGTGCATGCAGTACCTGGACCGGGCGGAGAAGCTGAAGGATTACTTACGAAACAAAGAGAAGCATGGCAAGAAGCCAGTCAAAGAGAATCAAAGCGAGAGTAAGGGCAGCGATAGTGACAGTGAAGGGGATAATCCAGAGAAAAAGAAATTGCAAGAGCAGCTGATGGGTGCCGTCGTGATGGAGAAGCCCAACATCCGGTGGAATGATGTGGCTGGGCTGGAGGGAGCCAAGGAGGCCCTCAAAGAAGCTGTCATTTTGCCAATTAAATTCCCGCACTTGTTCACAGGCAAGCGCACCCCTTGGCGGGGGATACTGCTCTTTGGACCGCCCGGCACAGGGAAATCCTACCTGGCCAAAGCAGTGGCAACAGAGGCCAACAACTCCACCTTCTTCTCTGTGTCCTCCTCAGACTTGATGTCTAAGTGGCTGGGGGAGAGCGAGAAGCTGGTCAAGAACCTGTTCGAGCTGGCCCGCCAGCACAAGCCCTCCATCATCTTCATCGACGAGGTGGATTCGCTCTGCGGATCCCGCAACGAGAATGAGAGCGAGGCTGCCCGCAGGATCAAAACCGAGTTCCTAGTCCAGATGCAGGGGGTGGGGAACAACAATGATGGGACTCTGGTGCTAGGTGCCACAAACATCCCGTGGGTGTTGGACTCGGCCATTAGAAGGAGGTTTGAAAAGCGAATTTATATCCCATTGCCGGAGGAGGCTGCCCGTGCCCAGATGTTCCGATTGCATCTGGGGAGCACTCCTCACAACCTCACAGAGGCCAACATCCACGAGCTGGCCCGGAAGACAGAAGGCTACTCGGGTGCAGACATCAGCGTCATTGTGCGGGACTCCCTCATGCAGCCCGTGAGGAAAGTGCAGTCAGCAACACACTTCAAAAAGGTCTGTGGCCCTTCCCGCACCAACCCTAGCATTATGATCGATGACCTCCTGACCCCATGCTCACCGGGGGACCCAGGGGCCATAGAGATGACTTGGATGGACGTCCCTGGTGACAAACTCCTAGAGCCTGTGGTTTGCATGTCGGACATGCTCCGGTCTTTGGCCACCACTCGACCCACTGTGAATGCAGAAGACCTCCTGAAAGTGAAGAAATTCTCAGAGGACTTTGGACAGGAGAGTTAAAAGCTTCTTCATTTGCCTGATGGTGAAGCTTACTGGACTTCTTACTATACCTGTATTTGGATTTTGGAGGACTTCGAATAAGTGTGGTGACGAGGAAATAGATGTCCTGCTTTCTGTTTCTGCCCTGACTGTGACAGGAAAAGGCTCATTGCTCCTTCTCAACTACAGGCAGTCCCCACTTGTTGAAACCACTTTGCACTGCTTTGCTTCTCTGAAAGACCTACATTAGTACCTGTTTTCACTAATGGAAAGAAACTTGAAGAGGACTTTCACTTTAACAAAAAAGGCAAAAGCCAAAACAGCATTCCACTTCTGTTTTGCAGCAAGCTCTTACAGAAGCAGCAAGCACTCAGAGCAGCCAGAATGGCACCACCAAGCTCCTTCCCAAGGAGCTACACTCAGCATCTCAGCATCCAGCCGTCATCGCTTTGCACTGTGTCTGTGAGCGTCTGTGCTGCATCTCGATTTATTCTGTGCATCTGTTAGCATGATGTGTCCTCCGTAACTGCTTCTTCCCTGTGTGCTATTTCAGCTTAGGAAAGGCTTCGTCAGAACGTTCTTTCAGATCACGGGGAAACCTGTATCGCTCCACGCCCTGCTCCATGGCCTCCACCCAAAGAATGAGCCACGTACCAGCTACCTAAGAGATCTCAGCAGGAAAACCTTCCCCAGGCCTATTAAAGGTGGAAAGCAAAAGCCCGAGACCTAAACTGTATCTGAACCTTGAAAAATGTATGACCACTCAGTTACGTTAAGACTGTCATTGAACTGGGGATATTCTGTCCTGTGTTGTGCTTCCACAGGCAGACTGGTATCCAAAACAAACAGAGACTGTGCAAGTAACACACATGGACCCTTTGTAACATAAGACTTGGTGAAGACGAGCAACCACAGCCTTAATCTGCATTTTAAACATAGCTTTCAGACGTTTGGGGGTTACATCGTAATCTGATCTTGGCTTGGGGAATAGATGGCTACACTCTTCTGAAATCACGTC EMBV3_10785 TAGTTGGCTCCACCAAGATACTAACTGCAGACCTGACCCATCCCCGATGCCTGCCGCTTC Gene BVV0102_095536 + 0 NULL GK000012.2:32293429-32300109 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37642 TGAAAGCTCTGGATGCTATCCGTGCCTCTGGGTCAAAGCACGAAGTGGGAGCTCTCAGCG Variant GeneID:538459|C3H1orf43:NM_001015666:186_cdna 491^716 2 EMBV3_19786 GeneID:538459 3 GENE C3H1orf43 C1orf43 MGC140006 chromosome 1 open reading frame 43 ortholog EMBV3_04497 TTTGCATCTATGTGAACAGCGCCATCAACCCCATCGTCTATGCCCTCATGTCCCAGCGTT Gene GeneID:509089|LOC509089:XM_002692348:172_cdna Constitutive 0 NULL GeneID:509089 13 GENE LOC509089 NULL similar to hCG1785352 EMBV3_11026 TGAGTGACATTGACTCAGAGCCCCCTCGGGGCACCTTCCCCGCCTTTGAACCTCGGAACC Gene GeneID:522613|PKMYT1:XM_002697934:601_cdna Constitutive 0 NULL GeneID:522613 25 GENE PKMYT1 NULL protein kinase, membrane associated tyrosine/threonine 1 EMBV3_31745 AGACAGCATTTGAGCTCCCACCTCCCGAAAACCTGACCCGCACCTGCATCTATACCATAA Gene GeneID:510840|ANKRD39:NM_001075471:44_cdna UTR3_Alt 2 NULL GeneID:510840 11 GENE ANKRD39 MGC142444 ankyrin repeat domain 39 EMBV3_07446 CAGGCCCCTGGAGAGCTCGTGAGGATTTTCACTCTCAGAAAGCCTTACTTTTCAACAAAA Gene BVT0102_215269 + 0 NULL GK000026.2:44558733-44566532 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00154484 1 XLOC_094244 NonCoding TCONS_00154484 XLOC_094244 NonCoding NonCoding - 26:44562047-44563566 - TSS115654 1519 2 TCONS_00154484_2 86 1 0 8.06131795649173e-05 5.95365103684499e-05 0.000188857196411064 0.000366278591568052 4.55039041355031e-05 0.000282584837171704 0.000291777592022955 0.000136283859272498 0.000389571848315987 5.14649939787864e-05 0.000483757201600137 1.88317683369153e-05 0 6.19353823513221e-05 0 0.00330361958370797 0.000240454339615761 0.00517015102247625 1.41624671767596e-05 0.000250920026066029 0.00012390775851679 0.000410360346552828 0.000863652963196284 0.000408356065171183 0.000839261636183059 0.00065398936959841 0.000304722101879136 0.000202347100018621 5.11347865896168e-05 0.000554123878073555 XM_005270299.1 FAM53B PREDICTED: Homo sapiens family with sequence similarity 53, member B (FAM53B), transcript variant X1, mRNA. 4e-34 150 68.65 0.294272547728769 0 noncoding 0 0 0 0 -0.0847538550081154 0.675598327904619 0.000809363777788341 0.98671928700676 ACTGGGTACTGAACCAGGAAGCTTTATTTACACAGTAAAAGTAACAAGCAGATTCCTGAGAGACTAGAGCGGCCCTAGTGCAAGATAGTTGTGGCCTGCGCAGAGGGCAGGCTGCGGTGGGTGGCAGTGGGGGGCAGACCCAGCGCCATCCTGCACAGCGCTTCACCCGGGCAGGGGCCGGGCCCAGTGTGGCCCGTTTTCCAGCCACCACGCTTCCTGAAGCTCTAGGGCACCGACGGGTGCTGCTGGGAAAGCACACGTGACCCCGGAGACGGCCAACCCGCGGGCACCCGCGCCCGGGACGTGGGCCCCCACACTGGGACACAATTTCTTTGCCAAGGAGACTATGCTAGAAGATTGGACTATTCTAGCTAGGTATAAGATTTCTGCTGTGGTCTGGGATTTTTTTTTTTTTTTTAATTAAATCCTTTTCTTTTCTCTTTAAAGAGGCGCCAGTGGGAGGGGTCCGGCCACCGTGAGCCTGCGGCAAGCGGCGGCACCATCGCCTACATGGAGGCGCTGTCCTGGCTGGGTTGCTGCCCCCAGAGCCGGGGCGTGAGGACCGCCTGCACCCCAGGCTGTGGGATCTGACACAGTCATCGTGTGGGTGACCTGCCTCCAGGCCAGGGTGTGTGAAACTCGAGCCCGTGGTGGGGCGTCTGTCCAGGGCGTGGGCTGGAGGCTCAGGCAGCACCAGCCAGAGTGTGGAAGCGCACAGGCTGCCCCTCCCCGACCTTGCTCTGGGGCCCCTTGTGGACAATGGGTTTGTTTCCTTTCTAAGGTGGACTTTGCATTTTAAAATTTCTTTCAGTGTATACAAATTCACAAAAACTTTTCCTGCTACAAAAATTTTGTTGAAAAGTAAGGCTTTCTGAGAGTGAAAATCCTCACGAGCTCTCCAGGGGCCTGGGAGTCGTGTCTGCCCACGGGCGCTGCACTGGCCCTGGCCTCCACCGCGAGTAAGGCAAGAGGGTATGCGGTAATGTAAACGCTGAGGCTGCCGCCCCGATGCCCGGCCCGGCCCCACGGGCAGCGGCCTCTGTTAGTCGGCGGCTTTAGTGAGGGTGCCCCAACACGAAGCCCCCACACCCTTCAAATGCACGACCCTGCTCTTGTCCTTCCAGGCCCCCGGGCAGGCAGACAGCCTGGCACAGCCCTCCCTCCTAGCTCTGAACTTCCTCAGTTCCCCCTTACAGGCAGGAGTTCATGGGCTGCACTAGGCAGGGTCCTGGCAGAAGTGAGGTTCGGGGCTGGGAAAGGAGGCACCAGCTGGCCTGCTGCCCCCTAGGGACACCCCTCACCCCAGGGTGGTCAGAGAGAGTCTCCCTTCAAGACCAGGAGTCCTGGTGCTGGGGGAGCAGAGCCCAGAGACGGGCCTCAGGCAGCACCTCCTATAGACAGATGGGGGCTGCTCTCTTTGATGGGAAGACGGACATGAAGCCACCCCACAGCTGCCTCTTTCTCTGAGGGATCACTGGTCATCCTCTCCCCTCCTTGCTGCTGTCGTGGGCTTGGGCGG TCONS_00152473 TCONS_00152474 . 3' 2952 TCONS_00152473 TCONS_00152474 . 3' 4470 EMBV3_25451 AGATTTTGCACAGGTGCCCGTATGTTCTTCGGGAGGACCCTGGTGAGCTGGAGTACAAAT Gene GeneID:512153|MTERFD2:XM_002686595:66_cdna UTR3_Alt 2 NULL GeneID:512153 3 GENE MTERFD2 NULL MTERF domain containing 2 EMBV3_42295 TGGAGGATCTGCTTCGAGAGGCACTGTGAGCCTCTATGGACTGTGAAGGCAGAATGCATT Gene GeneID:509649|MGC139164:NM_001101916:53_cdna Constitutive 0 NULL GeneID:509649 18 GENE MGC139164 NULL hypothetical LOC509649 EMBV3_38473 AGAAAGTGTTGGTTGCTCAGTCATGTCCGACTCTTTGCTACCCCATGGTCTGTCCAGGCA Gene BVT0102_085455 + 0 NULL GK000016.2:47948275-47951660 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27745 AACTGTGTCATCAAAGTAGTGATGGATTCAGTACTCCTCAACCACTCTCCTAATGATTGG Gene GeneID:614435|PTP4A2:NM_001104998:175_cdna Constitutive 0 NULL GeneID:614435 2 GENE PTP4A2 MGC159683 MGC179416 PTP4A3 protein tyrosine phosphatase type IVA, member 2 EMBV3_10085 GGGACCCCACGAATTGCCATCTCTGACTTTATTCCTCACTCTCTCCATGTGACCAGGCTT Gene GeneID:281528|TGM2:NM_177507:721_cdna Constitutive 0 NULL GeneID:281528 13 GENE TGM2 NULL transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) EMBV3_09471 GCGCCCATCGACAGCTTCAGTAACGGCGGCAAGGAAAAAAGGGTTCCCCTTTATGCATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13553 CACCACATTGTTATCAGTGGCTTTGTGAGAGTGGAATTATGGGAGAACTTTCATGATTGG Gene BVT0102_030597 + 0 NULL GK000017.2:2912626-2991843 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074685 TCONS_00074683 TCONS_00074682 TCONS_00074681 TCONS_00074686 TCONS_00074684 1 XLOC_046406 Coding TCONS_00074686 XLOC_046406 Coding Coding PLRG1 17:2891499-2914533 = TSS56511 7211 1 TCONS_00074686_8 513 0.205796699486895 15 0.687578691442713 0.000428060954562371 0.00102316077941493 6.41407156646517e-06 0.000331668145762255 0.000848895553031882 1.06504826138147e-06 0.000254058669045411 2.36487678952548e-06 0.000779252948153001 3.57503356912529e-07 1.44998904682626e-07 3.49880873421176e-07 5.92124877466356e-08 0.000382139277452544 4.70465764157827e-06 0.00169637292102782 7.87210059047821e-12 0.00240932291264989 2.6631203786609e-06 0.00120856140045506 5.68024324994056e-07 5.26376873376072e-07 0.000370598632240776 0.00255003046189846 3.70964766992365e-07 6.41503344518465e-06 6.17421118062425e-05 0.000527798824785479 0.000484152231611536 0.000659176947981053 XM_005217444.1 PLRG1 PREDICTED: Bos taurus pleiotropic regulator 1 (PLRG1), transcript 0.0 4156 98.86 0.327277770073499 NM_002669.3 PLRG1 Homo sapiens pleiotropic regulator 1 (PLRG1), transcript variant 1, 0.0 2931 79.50 0.456802107890723 TCONS_00074686_8 sp|Q2KID6|PLRG1_BOVIN PLRG1_BOVIN Pleiotropic regulator 1; 0.0 1070 100.00 0.998050682261209 2 coding 1 1 1 1 0.198900482228558 0.714046172329019 0.0665649652284526 0.434429687074426 GAACTATTTCAAAGGGAAAGTTAAGATCAACTGATTGGGAATCAAGCTGGCTTTTTTTTTTTTTTTTTAAGAAAAGCATAAATTGTGCATTAGAAGAGGAGCTGTGTTTTCAAACAATGCAATAAATCACTTAAAGTTTTATATATTAAGTATATATAAAAGTATCAGCACTAAAACTCTGTAGAAAATGAAAAAAATTTTATTTGGAGTATTTTATAACATTAAAATTTTTTTTCATTATTTAATAGCAATGTCTTGAATTAATTTATAGTATTTTCAAACTTCACTGGTGGTGCAGTGGATAGGAATCTGCCTGTCAATCCAGGGGACACAGTTTTGATCCCTGATCCACGAAGACTGCACATGCAGCAGAGCGACTAAGCCTGTGGGCCACAACTTCTGAGCCTGAGCCCTAGAGCCTGAGTGTTGCAACTCCTGAGCCTGCGTGGTACAGCTACTGAAGCCGGTGTACCTGAGAGCCTGTGCTCTGCAAGGAGAGAAGCCAGTGCACTGAGGAGCAGCCCCACGCACCGCATCTAGAGCAAGTCCGTGCAAAGCAACAAAGACACAGTGCAGCCAAAAATAAATAAACAAAAATTCACAGTATTTTCTGTAAAATGTGCCCAAGATTAGATCAATGACATAACAGACATTTATAAATTTGAATCTTCATAAGATATATTTTCATTAAAATTTTTTATGCCCTTTCATTTTTCTCATGTCTTGAATATTTTTTCATTTATTGTTGCTATAAATGAGATCTTTCCCCCATTATATGTTTTAGCTGCATATATACAAGTTACTGACTTTTAATAGGGAATAAAGGGATCTCCTATATTGGTGAATTAAAAAAAAAAAGAGCTCAACTAATAAAGGGAGACTTTCCTTAAAATTTGTACTATAGGCTTCATCCAAACAGACCTAATAATATACATTAATAAAGTATTCACCATGTGCACTTTTGCAAACAATCCTTCTACATTTATCAAGAGCAGCACTGACCTCTACTGCTCAAGTAAGGCAGCTCTGGGTATCAGCCAGGACAAGGTTGGTTTTTGTTTTGTTTTGATTTTTATTGGAGTACAACGTTGTGTTAGTTTCAGGTGTACAGCAAAGTGAATCGGTTATTTATATACATATATCGACTCTTTTTCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGTGGGGTCGCACAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCATCCACTCTTTTTAGATTATTTTTTAATTAGATTAGATTATTATTTAAATTATTTTAGATTATTATATGCCATTACAGAGTATTGAGTAGAGTTCCCTGTGCTTTACAGTAGGTCCTTCTTAGTTATCTATTTTATATATAGTAGTAAGCATAAGTCAATTCCAATTTATCCCTCCCCCTTACTCTCTGGTAACCATAAGTCTATTTTCTCCATCTGTAACTCTGTTTCTATTTTGTACGTAAGTTCATTTGTACCATTTGTTTTAGATTCCACATATAAGTGACAGCACATATTTGTGTTTCTCTGACTTCACTCGGTACAATCTCTTCACTCAGGCAATCACTAACTAGGTCCATCTATGTTGCTCCAAATGGCATTATTTTGTCCTTTATGACTAATATTCCATTGCATATATGTACCATGTCTTCTTCATCTATATTGCCATAGATATATTAGAATCTTGTTTTCTTCTCTGTAATTTTATTGCCCTGTAACATCATGTTCTTTTATATAATTATTTCTATCTAAAAGTAAGTTATACTCTGATTTATTTTCCAAGTATACATTTTATATTACAGCATTTCCTTGCAAGGGCTGCTATTAGTGGCCACTGTTATTGAAAATTACTTCTTTAGGCCAAGTGTTGTGTTAGTCACTCAGTTACTGACTATTCTTTGCGACCACATGGACTGTCTCTGGCCAGACTCCTCTGTCCATGGAATTCTCCAAGCAAGAATACTTAAGTGTGTAGTCATTCCCTTCTCCAGGGGATCTTCCTGAGCCATGGATTGACTCAAGTCTCCTTCATTGCAGGCAGATTCTTTTACTGTTTGACCCACCAGGGAAATCCCCTTAAAGCCAAACTTACACTCAAACTCAGAGATGATTATATTTTCCAATACATGCATGATCTTAACGTTTATAATGAATTAAAAATTAATTTTTAAATGAGATGATCAACTTACATTGCTATACTTTGATAGATTTTTCTCCCTCTTAAAGCAGGTGCTCTGATGACAAGATCTGCAGAAAGTGACTACGGTTAAAGAACAGGAGAGCCAATAAAACGTTCGTCTATTCAAATTTGCAAATATCCAGTTCCATCAATTTTCCTCCTTACCTAGAAGTATAGGTACAACGATTGCAAACTGCAGAGTCTACCTGGGTATAAAAGAAAACGCCCATCTTTTGGCACCAGTCTGTATATATTAATATATAAAAATGCCTTGTCTTCAGATGTTTTTCTTCTCCCCACTTTGGCCAACTGTACCCTGGCATTGTTGAAGCCACATTTATCATTGGACAACTAGCAAACAAGAGTTATGCCAAGAGTTTTGAGAGATTAAAATTTTAAAAAACCTGTATTAGTGGAAAATAAAAGAAATGGCCAAGAGTTCTGAGAGACTTTAAAAAAAAATCTTTGGAAAATAAATTTGAGATTTTGCCACATGCTATTAAAACCAAAATATTTTGCAGAATTTCTCAAATTGAAACTGTTTCAACAAGTGCTTGATGGACAGTGTAAGTGGAATTGTTTCTGGGCGCCAAGAATACAAAGACGTCTAATGGCTTTCAGCCAAATTGAGTCAAATAGCGCAATCTGGCTACGTGCATCACGGAGGCGCCCCCTCAAAGAAGGCAATAGCGTGTAAGAGCCTTCCCGCGCTCTCCGGAAGTTCCCTAAAACTGTTAGTTCGTCTGAAGAAATCGCATTAACATTCCAGAGAACAAAGGACATGCGACCACAACCCTAAATCAAAGTATTTAAGGCTGTGAGTAGGGCAGAAAACGTTATTATCTCAAGATTTCTGCAAGAGGAAGTGAAACGCATCGTCACGCGACTCCCGCATCTTCCGCTTTGCTGTCCAGAAGCTCCTCCCCAGAGGCGGCCGGAGAAGAAGAGCCCGTCGCTTCACCCCGGAAGGCCTGCGAGCGCCCCGCGCGCCTGCGCGGAACCTTGCGTCACATCCGGCCCAGGAAGCGCAATTCCGGAAGGGGCTGAGCCGAGGTGGCGGCGGTTTCTGTCCTGTTCTCCTGATTCTACTGTTTCTTCCCTGCTGGAGCGCCTGTATAGACGGCAGAGCCATGGTCGAGGAGGTGCAGAAGCATTCTGTACACACGCTTGTGTTCAGGTCGTTGAAGAGAACCCATGACATGTTTGTGGCTGATAATGGAAAACCTGTGCCTTTGGATGAAGAGAGTCACAAACGGAAAATGGCAATCAAGCTGCGTAATGAATATGGTCCTGTGTTGCATATGCCTACTTCCAAAGAAAATCTTAAAGAGAAAGTCCCTCAGAATGCGTCAGATTCATATGGACACAAACAGTATCCTGCCAATCAAGGACAAGAAGTTGAATATTTGGTGACAGGTACACATCCGTATCCACCAGGACCTGGGGTTGCTTTGACAGCAGACACTAAGATCCAAAGAATGCCAAGTGAATCAGCTGCACAGTCCTTAGCTGTGGCATTACCTGCTTCTCAAGCCAGAGCTGATGCAAATCGTCCTGTGCCTGCTGGCGGTGAATACCGGCACCCCGGGGCTCCTGACCGTGCGCAGCCTGCAGGGGCGGTTGTTATGGAGGGTAGCAATGCCAAGAACTCTGCACTGATGGCTAAAAAAGCCCCTACAATGCCAAAACCCCAGTGGCACCCACCCTGGAAACTCTACAGAGTGATCAGTGGGCATCTTGGCTGGGTTCGATGTATTGCTGTCGAACCTGGAAATCAGTGGTTTGTTACTGGATCTGCTGACAGAACTATAAAGATTTGGGACTTGGCTAGTGGCAAGTTGAAACTGTCGTTAACTGGGCACATAAGCACAGTACGTGGTGTGATAGTGAGCACGAGGAGCCCGTACCTGTTCTCCTGTGGAGAAGACAAGCAAGTCAAATGCTGGGATCTCGAGTATAATAAGGTTATAAGGCACTATCATGGACATCTGAGTGCCGTGTACGGCTTGGATTTGCACCCAACCATCGATGTGCTGGTGACCTGTAGCCGAGACTCAACCGCACGGATTTGGGATGTGAGAACTAAAGCCAGTGTACACACATTATCTGGACATACTAATGCAGTGGCTACAGTGAGGTGTCAGGCTGCGGAACCACAAATTATCACTGGAAGCCATGATACTACTATACGATTATGGGATTTGGTGGCTGGAAAAACAAGAGTCACATTAACAAATCACAAAAAATCAGTCAGAGCTGTGGTTTTACATCCAAGACATTACACATTTGCATCTGGTTCTCCAGATAACATAAAACAGTGGAAATTCCCCGATGGAAGTTTCATTCAAAATCTTTCTGGTCACAATGCTATTATTAACACATTGACAGTAAATTCTGATGGAGTGCTTGTATCTGGAGCTGACAATGGCACTATGCATCTCTGGGACTGGAGAACTGGCTACAATTTCCAGAGGGTTCACGCAGCAGTGCAGCCTGGGTCTTTGGACAGTGAGTCAGGAATATTTGCTTGTGCTTTCGATCAGTCTGAAAGTCGATTACTAACTGCTGAAGCTGATAAAACCATAAAAGTGTACAAAGAGGATGATACAGCAACAGAAGAAACTCATCCAGTCAGCTGGAAGCCAGAAATTATCAAGAGAAAGAGATTTTGATGTGTTCATTGTGGTTGCAGTTTTTGTTTTTTTGTTTCTTTTTAGCTTGGCCTTGATGAGAATATCCAGTCATTTGTGCTCTGGCTAGGAATATAAAGCAAAAACTCATGCTTGAATCATTGCATTTTCATATTTTACAATGAACTGTCCTCCCCCATGTTTTTATTTCTAAAATTAACAGTTTGAGATCCTAGAAAGTAAGATGTAGATATCAAGCATATGTGAGTTTTTTGACTATAACTATCCTAAACAGAATGATTTGCCACTTCTATTAAAACACACCCCTTTTTTTTTAACTTACAAAACTGCTTACTTTAGTAGGACATGTTTTGAGGGGAGTAATCTTTCTCTTAAACCCTTAAATACTGGTATCTGTGATTGATATTTTGGGATTAAAGGATTTTTAAGTCTTATGTATGTTTATCTCACCAACAGTTTTTGAGCACATGTTCTGCAAAGTTCTGCACTAGGTACTATTCAGAAAGTATACAGATAAAATGTATCTGTCCTTTAAGACTTCCACTTTTAGCAGCTTACTACAGAAATACTATCATAGAAGTGCCAGTGAAAAACCAGGATAACACAGAGGAAAAGCCCATTTTTTTTCCTTGGGAATGATTGTGGAAGACTTCATGGAGTCATTGGTGTTTGAGCTGAGTCTTGAGAGGTCACAGAAAGAAAGGGTATTCTAAGGCAAGGTGTGAACTCAAAAACCAGGCATTCAAGAGGTGTATGTTCCAGGAACAGAGAGCTGTCTGCTGCACTTGAATGAGAACAGCTGTAGGGAAAGCTTGTGTTTTGAGTTTCAGTTTTATTCCACAAGCAGTAGGTTACCAATATAGGTATCAAACCCTGGAGAAGTAACTGGAGATACCAATTGTTTGAAGCTATACTGAGGATTGCAGTCTTTTGCAGAGACTCCATAGAAAAGTTTAAGTTTTTGATGCCTGTGCCTCTATCCTTAGGATCCTCATGCCCTATCAGTCAAGAAAATTTATCACACTTTACTTTCTATAGTTAGAAAACACAATTATAAGAACAATCAGTTTATAGTTTCAAATGAAGAAATTAAACCATAATTTTGAATAAGGATTTCCAAATATATGTGTCCCATCTTGCATGCTGTAGGTGGGAATGTAGTTGTTAAGCCTTTAGGGAGGGTAGTTTTCCAGAGTATATTGAAAATGCTTGGAATCTTTGGCCAACTCTTCATTAGAAATGAAATTACTAGGAAACTGCCTAATATGAATAATCTGACAAGTGTACACAGCAAGTTCATTTCACCTTTGTTCTTTAATTAAAACTAGCCCAGATGTCCGTTATAACAATAAGGGCTTAATATATTATGGTATTTTCAGTTTCTCTCCATAAAAAGTGAGAAATATCTCTGGAATAATAAGATGTCCAAATTTTACTGTTATATGAAAAAGGAAGTTGTACAAGCATTTTTTTTGATAACTTGTTAATGTTCTAAAAAATAATAGGAAAGTAACACCACATTGTTATCAGTGGCTTTGTGAGAGTGGAATTATGGGAGAACTTTCATGATTGGCTTCATATATTTCTATAATGTTTTAATTTTCTATAAGCATGTATTTTGTAAACTTAAATAAAAAAAAAAAAAAAAACCCACGGCACTTGCATCCCTGAGAGATGAATTATGCCTTCCAACAGAAGAAAGATCATAGAGGTGAATACTGTCCACAGCCTGGTCCAAAAGACAAGGAGAAACGGTTAGAACAAGGAGGTGAGGATGATATAGCCCTTGTCATCCTGCCTAGCAAAGCTTCCGCTTACTCTGCTTGTTAGACACAAGTATCAAATTCTGAAGAGCATGAGAAAAATCCATTTCCCCGATTCATGCTGTTCTGTATTGTGGTGCTGTTGAATCTTCTTGCAGAAAGTTTCCACCATGTATGGTCACGAACCTCATGAAATCTTAAGCAGGATTTCTTGTGTGTGCCTTTGTTCTTTGTATTTACTTGGCAAAACCTCAACCCAAGTTAAACCTGAACCTTCCTGTGCCTAGGCCCTGAGTACACTCAAGAACCTGTAAAATGTTAGCGAGACAACTGTGCTAGCTGAACTCATTTTTGATTTATGAGCACACACCATATGTAAGCCATCAGCAGTGACCACACTCATTTCTACAAATAAAATTACACCTTCTTTTCCAAAGGATGAACTACCCACCTACTAACAACTCTGTTGAGTATGTATACAATTACTGCCTTATACTCTTGCCTACTCAAGAACTTAACTTTCATAATTAACCCCTTTCTTTTTTGCAGCATAAATTCCCTTTTTGTCAAATGATGCTC EMBV3_24745 GTGATGTCTCCGCCGGACGGAGCTGCTCAGATGTCCTTCGGCCTTCTCCGCGTGTTCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10496 ATGGTACAGATCAGGAAGAAATTCGAACTGGATGTCTCAGAACTAAGGAATGAATTACAG Variant GeneID:513972|MED28:NM_001038538:168_cdna 252^364 1 EMBV3_39237 GeneID:513972 6 GENE MED28 MGC133509 mediator complex subunit 28 EMBV3_27927 AAACTTGCCTTATTTGGTAACTGTGGTTAACTGGTCCCCGCTGGTAATGCTGGTGAGCTC Gene BVV0101_016254 + 0 NULL GK000015.2:8293361-8921937 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29614 TCAAGACATGGATGAAAAGATCAGATACAAATTGTGGATTTCCTGAAGAAGAAACGTGAC Variant GeneID:515218|SAPS3:NM_001105372:284_cdna 390^576 1 EMBV3_00528 GeneID:515218 29 GENE SAPS3 NULL SAPS domain family, member 3 EMBV3_10393 GGAGTTTTCAGGAGCTTTTGACACTATATAACCCGCCCTTTTTTGTATGCACCGTGGGCG Gene GeneID:514819|PTK7:XM_002697250:454_cdna Constitutive 0 NULL GeneID:514819 23 GENE PTK7 NULL PTK7 protein tyrosine kinase 7 EMBV3_37233 AAAAAGAGAAAGTTAAAGTAGGTTTACACCATGTGCCTTCAAGTTGATATCAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_07824 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05814 TGGTGTTCAACCAGCTGCCCAAGATGCTGTACCCCGAGTACCACAAGGTTCACCAGATGA Gene GeneID:768073|OSGIN1:NM_001077129:83_cdna Constitutive 0 NULL GeneID:768073 18 GENE OSGIN1 MGC137469 oxidative stress induced growth inhibitor 1 EMBV3_40924 GCAAAATCGCCAACTTGCTGAAGCCAGACAAAGAGATCGTGCAGGAAGGCGACCACATGA Gene GeneID:537379|RBP1:NM_001025343:63_cdna Constitutive 0 NULL GeneID:537379 1 GENE RBP1 CRBP1 MGC133574 retinol binding protein 1, cellular EMBV3_00222 GAAGCTAAGAAGCTAGTAAGTGAAGCCATAGCAGCCGGGATCTTCAACGACCTGGGGTCT Gene GeneID:511207|PSMB7:NM_001038527:17_cdna Constitutive 2 NULL GeneID:511207 11 GENE PSMB7 MGC133789 proteasome (prosome, macropain) subunit, beta type, 7 EMBV3_09369 GATCTCAGCATTCTAAGTGAGGCACACAAGTATTTATTAAAGGTACCGCTAGGAAACTGG Gene GeneID:538441|LOC538441:XM_002689664:3_cdna UTR3_Alt 2 NULL GeneID:538441 8 GENE LOC538441 NULL similar to chromosome 9 open reading frame 41 EMBV3_18094 TGTTACTCCAGACAGGTGACGCCATACAACCCCCAGCAGATGGGACAACAGATTTTCCGT Gene GeneID:541065|LOC541065:XM_002686490:582_cdna Constitutive 0 NULL GeneID:541065 3 GENE LOC541065 NULL similar to mCG54492 EMBV3_11354 CTGCCAGGCTGTTTTCCAAAGATGCCACACCATTTTACCTTCCCACCAGAAGCATATGAG Gene BVT0102_173423 + 0 NULL GK000010.2:104144330-104175740 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22220 CAACGGCAAGCCCAAGAGCACTACAACGCCACACTGAGCAGTCTGCTCCAGAGCCAGAGC Variant GeneID:524652|C18H16orf48:NM_001035350:297_cdna 834^974 4 EMBV3_13888 GeneID:524652 18 GENE C18H16orf48 C16orf48 MGC127802 chromosome 16 open reading frame 48 ortholog EMBV3_28880 AGATTTTAAGATGTGGATCAACCCTTGCGCTCAGGTAATCTTTGACTCAGACCCCGCCCC Gene GeneID:528744|PAF1:NM_001046293:655_cdna Constitutive 0 NULL GeneID:528744 18 GENE PAF1 MGC129094 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) EMBV3_37837 ACTGCATGGCAAGAGTGCGTAAACAATTCTATGGCGCAGTTAGAGCATCAGGCAGTTCGA Gene GeneID:507944|BCAS2:NM_001015540:32_cdna Constitutive 0 NULL GeneID:507944 3 GENE BCAS2 NULL breast carcinoma amplified sequence 2 EMBV3_09923 GGCAGCCCACCACCGTATATCAAACCTCACTTCCGAATGTTAAAGGTTCACACGCCTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19933 GATGCAGTTGCTGTCCGAGATAGAGGAACAGCTGAACTGTACCAATTCTCAGGTTGAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35627 GCCGGTGCCACTGCGCGTCTGTGCGAACAGATCCCTAGGGTTATTTTCAAGATGGACTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39513 AGGACGGAGTTAGAAACGGGGTGGGTGTCTCTCCCAGTCCTTCTCTGCAAAATGCCAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16171 CACCCCCACCAGAGGAGCAACCTGAGCAGAGTTCAGATGAGGACTGACTATCCAAGTAAT Gene GeneID:616478|LOC616478:XM_002687786:56_cdna Constitutive 0 NULL GeneID:616478 5 GENE LOC616478 NULL similar to predicted protein EMBV3_07958 CACTATTCACGAGTCAAGCTGTGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAG Gene BVV0102_414598 + 0 NULL GK000014.2:46894220-47005556 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00141370 TCONS_00090416 TCONS_00169477 TCONS_00053047 TCONS_00169478 TCONS_00013239 TCONS_00013240 TCONS_00053048 TCONS_00013237 TCONS_00132043 TCONS_00071867 TCONS_00252293 TCONS_00019980 TCONS_00207062 TCONS_00168148 TCONS_00187309 TCONS_00226268 TCONS_00031871 TCONS_00132044 TCONS_00169479 TCONS_00013238 TCONS_00071031 TCONS_00137852 TCONS_00202430 TCONS_00110376 TCONS_00226267 TCONS_00230483 TCONS_00202431 19 XLOC_085798 XLOC_055197 XLOC_103372 XLOC_031635 XLOC_008038 XLOC_080693 XLOC_043637 XLOC_155234 XLOC_010658 XLOC_125581 XLOC_102983 XLOC_113357 XLOC_137960 XLOC_018116 XLOC_042804 XLOC_084061 XLOC_123974 XLOC_066280 XLOC_139973 Coding TCONS_00168148 XLOC_102983 NonCoding NonCoding - 29:50879636-50881124 - TSS126126 1488 2 TCONS_00168148_1 138 0.936155913978495 1 0 0 4.50197843854933e-07 0 8.37112558462855e-06 2.16946019378399e-06 0 1.30638093469844e-06 0 4.0788621837241e-07 0.000407873213085123 0.000222191335896903 0.000273439517192895 4.37659181384484e-06 7.98588130625371e-06 5.85328560500709e-05 0.00344460910509694 0.000874245010668414 0.00345946377201573 6.02397363189156e-06 6.44394572178701e-07 5.89373497426738e-06 0.00286416229700868 0.00546593726982427 0.00197481945662961 3.32589259098353e-07 4.73485863632411e-06 1.8375495634361e-06 0.0033440627369674 0.00146037636489051 0.00279477376988777 XM_003583446.2 LOC100848419 PREDICTED: Bos taurus uncharacterized LOC100848419 (LOC100848419), 1e-128 464 80.45 0.301075268817204 NM_152473.2 ERVV-1 Homo sapiens endogenous retrovirus group V, member 1 (ERVV-1), 1e-07 62.6 72.99 0.0860215053763441 TCONS_00168148_1 sp|P10400|POL1_MOUSE POL1_MOUSE Retrovirus-related Pol polyprotein; 3e-08 49.7 52.27 0.311594202898551 0 noncoding 1 0 1 1 -0.0929333867839583 0.498616073922466 -0.0279596046177621 0.571171768473429 NCAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGCCACCACTATATGCTCCAGGAACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCCCACAGCAGTCAAGGTACCAGGACGTGACTCCTGGATTCACTATTCACGAGTCAAGCTGTGGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGTCCCTGGGAGATCTCAGATACCTATTCAGAAGCACCAAGGAGTGCCATTCTAATGAACACCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGGATAACTCTAAGGAGCCAATACAGCTTGACAGAGATTGTACTCCAAGACAGACAGGAGATAGATCTTCTGATCCCTGAGCAAGGAGGGACTTGAGCCATCCTGGCGATGTGAATTTAAAATTGACCAGTGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCCTATGATTATTCCATGTACTGTCAATCGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATATAAAACTACAGCTGACCACGGAAGATATCACACACCCTTGGGCACCGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAGAGGGAGGCCCAATACCCCTCGCTGCCCCAGTTCAGCAGGAAGTAGCCAGAAAGACCTCGACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGGTATGTTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGTGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACACACAGCACTCCCGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGGGGAAAAACATATAAAAGGAGGAGCCAACGCGCTTTCTCTCGGACTCTCTCTCCCACGTGCGTGCGCTCTTTTCTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAGCACGGTTTGTCCAAGACCTGAGAGCTGTGACGCGCCGAGGGCTTTAATGTCCGTCGCTCCAATTCTTTGTTCTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGATCCAATCCCTGGTCTGAGAAGATTCTGCAACTAACCCTGGGTGCCACAACTGCTGCGGCCATGCCCTGGAGCCGAGAACTGCAACAAGAGAGGCCACTGCATCGAAAAGGCCGTGCACCGCGGCTGGAGGGCGGCCCGCTCACCGCGGCTGGAGAAAAGCCCCTGCAGCAAGAAAGGCCCGGCGCAGCCAAAAAAGACTGAGAGACTACACGACCCTGAGCCAAACATGCAAGAGCAAAGTGTCTTTTGTCATTTTCACACTTACTTATTAAAGAAAT TCONS_00164280 . 5' 15069 TCONS_00164280 . 5' 15069 EMBV3_39370 AGCTGCAGAGTCAGATCCAAGAGGCCAGAGCCGACTTGACCCGCAGGGGACTTCGCTTCT Gene GeneID:509745|DPM3:NM_001034360:114_cdna Constitutive 0 NULL GeneID:509745 3 GENE DPM3 MGC128163 dolichyl-phosphate mannosyltransferase polypeptide 3 EMBV3_17210 GGATGACCTGGATGGGCAGATCCGCCACATGCTCTTCTCCTGGGCGGAGCGCCAGGCTGG Gene GeneID:100137737|LRDD:XM_002699408:50_cdna Constitutive 0 NULL GeneID:100137737 29 GENE LRDD NULL leucine-rich repeats and death domain containing EMBV3_09360 CTTCTGAGTGGGATGTTCCAGCCTATGGCTTCAGATGTTAGGTGACTCCAAGTGATGACC Gene BVV0102_226159 - 1 EMBV3_41855 GK000009.2:51077753-51100280 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43370 GAGAAGGAGAAGCTCAAGTCCCAGTGGAACAACGATAACCCTCTTTTCAAGAGTGCCACC Gene GeneID:281877|ITGB2:NM_175781:5_cdna Constitutive 0 NULL GeneID:281877 1 GENE ITGB2 NULL integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) EMBV3_36180 GACAGAGGAGATGAGAGAAAATGAAAAGGCCTCAGCAGAAGAGCAGGCCAAAAGAGAGGC Gene GeneID:786372|LOC786372:XM_002686240:266_cdna Constitutive 0 NULL GeneID:786372 3 GENE LOC786372 NULL similar to trichohyalin, putative EMBV3_12043 AGAAGCTGCAATAGACAAGCACCTGACGGTTTACCAAACAAGACACTGATGTTCTGCCAC Gene GeneID:506398|ZNF165:XM_002697450:51_cdna Constitutive 0 NULL GeneID:506398 23 GENE ZNF165 MGC140342 zinc finger protein 165 EMBV3_39506 AGTTTGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGCAACAGTGTTGGTGACG Gene GeneID:100336920|LOC100336920:XM_002693075:403_cdna Constitutive 0 NULL GeneID:100336920 15 GENE LOC100336920 NULL protein tyrosine phosphatase, receptor-type, F interacting protein, binding protein 2-like EMBV3_36377 AGTTGGGCACAAATGGGGAGGGAGAAAGCAGGAAGGAGCATAGTATGGGTGTCACTGAAT Gene BVT0102_164501 + 0 NULL GK000002.2:71309853-71387701 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30073 ACCCCGCCCTAAGTGCTGGCTAATTACTCCCTCATGCGAGTGGATTTTAAAAGCTCAGAA Gene BVT0102_042632 + 0 NULL GK000011.2:68222916-68232861 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032512 1 XLOC_018752 NonCoding TCONS_00032512 XLOC_018752 NonCoding NonCoding - 11:68231120-68231832 - TSS23511 712 0.25 1 0 3.82183617151404e-05 0 0 9.33051165799015e-05 0 0 0 2.49216288121649e-05 0 0 3.21514763011516e-06 1.0044052103349e-05 0 8.58875614940617e-05 0 0 6.99534752173121e-05 0.00014096035846217 1.00715395491045e-05 5.05016679752206e-05 0 4.16891911778565e-05 0 4.70918023230977e-05 0 4.94766393333883e-05 0.000353852677002976 0 0 0.0011737373956793 XM_001788478.4 DVL3 PREDICTED: Bos taurus dishevelled segment polarity protein 3 (DVL3), partial mRNA. 5e-09 66.2 76.67 0.125 0 noncoding 0 0 0 0 -0.868211596371257 0.0126081185688617 -0.0437731184277715 0.505574337826432 CGTGTTTGAGTGTCACTGTTTGTGACTCATGGAGATCCGGTTCTTAATTCCTATTTTTTGGAAAAACTACCACCCATAGTATGGGCTTTGGGTGAAACAGATCTAGGTTCAGTTTCCATTTCTGGCTGAAAGGATGTCTAAGAAAGTCATTTAGCTTCTCTGGGCATCAGTTTCCTTATATACAAAATGTAGATAATTAACCTATCTAGTGGGGTTCTACTGAGGATTAGCAATAATGTAGGTAAATTACCTGACAAGCTATTGTTTTCACATATTGGCAACAATAAACTGTTTAAAAGCTTTGTTAAATATGTTCATGCTTTACTCATTTCTATATTCAAGAGTCTCAATTTACCAAGAGTTTTATTTCACCTTTTTTAATGGAGCTGTCAGTGTATTATAACTTGGGTCTCGAGATAGCTTAAGGAACAATTCTTAAAAATCTTAGTTCTGTTCTACGTACATTTATATTTGTACCACACACACACAAACATCATTTATAGCCGTCTTGAATAGGAAGTATTCTTTTTGAATGTTTTCCTCTAGAATTAAAAGAGAAGGAAAGACTCTGAAAGAGATGTCAAACAAATCTCAGAATTCAACGTCAATTGCAGGTACAGGAAGTTTCTGAGCTTTTAAAATCCACTCGCATGAGGGAGTAATTAGCCAGCACTTAGGGCGGGGTATACAGCCTCGCGATTCCAGTGCTTTC TCONS_00025262 . 5' 825 TCONS_00025262 . 5' 825 EMBV3_05943 TGCGCCAGCAGATGGAAGAGCTGAAGGCGAAGGAGAGGAGGCAGATGGCAGCCTTGCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17906 GAGGGGGACACAGGCAGCGACCAGAGGCAGGTGATGCTACCAAATGAATACCCAGGTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42023 ATGGGAGGCTATTTTATGAATGTTCTAGTGTTGTGTCGGACATGGGATTTGCTCTTTATA Variant GeneID:514943|RHBDL2:NM_001102014:170_cdna 737^797 1 EMBV3_40122 GeneID:514943 3 GENE RHBDL2 MGC148990 rhomboid, veinlet-like 2 (Drosophila) EMBV3_18023 CAAAGGAGTGCAGCATGTATGTCATTGGAGGGGGGAGGTCCTTGCCAAAGCTGGCACTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23321 TGGCTGAATGAGGACACATGCTTTTCTGTGCTTCGGTTTTGTAAGCCAGAGCCCTAGACC Gene BVV0101_024910 + 0 NULL GK000026.2:8690465-8734534 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00741 TCCCTGCTTCCTAGTTCAGAGGCTGCCCCTCACCAGGCTCTGTGCTCGGGGAGGCAGGGA Gene GeneID:100313228|MIR2455:NR_030813:271_cdna Constitutive 0 NULL GeneID:100313228 7 GENE MIR2455 bta-mir-2455 microRNA mir-2455 EMBV3_08207 TTACAACTACCGAGTGGTGATGCTAAAGGGAGACACAGCCTTGGATATGAGAGGGCGTTG Gene GeneID:788127|RAD50:XM_002688961:110_cdna Constitutive 0 NULL GeneID:788127 7 GENE RAD50 NULL RAD50 homolog (S. cerevisiae) EMBV3_21051 TCTCCACTTTGCTCACCTCCTACATTTCACATACCTACAAGCTCCCTTGGAATGCCCCGT Gene GeneID:100299988|LOC100299988:XM_002699958:24_cdna Constitutive 0 NULL GeneID:100299988 X GENE LOC100299988 NULL similar to T-box 22 EMBV3_43043 GGAGTACTTTGAGGCGCTTTCAAAGACGTATTTGTAGCAGTTACATCTAAATTAGAGCAG Gene BVV0102_452491 - 1 EMBV3_42489 GK000030.2:111203562-111213904 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253522 1 XLOC_156462 NonCoding TCONS_00253522 XLOC_156462 NonCoding NonCoding - X:111203882-111206383 - TSS190743 2501 3 TCONS_00253522_4 50 0.084766093562575 1 0 7.61613637598601e-05 0.000349546445709598 3.70012595837011e-05 6.64066064387607e-06 9.87040426454927e-06 1.43024778048321e-06 3.96398181810495e-05 4.49338461675769e-05 7.88698869343923e-05 1.00353109408987e-05 3.66123350836154e-05 0 6.7687864181065e-05 0.000139182483954515 2.74637115093279e-05 0.000918756512662122 0.000172594574959668 0.00373203296223669 0.000212175010404975 0.000186902478685596 6.91869130477008e-05 0.000735835519388826 0.000319128286842135 0.00109931887028758 0.000193919874536035 0.000132401809947738 9.83943281729043e-05 0.000165143405425622 4.07623663846837e-05 0.000235585284672769 XM_005216047.1 NLRX1 PREDICTED: Bos taurus NLR family member X1 (NLRX1), transcript 1e-54 219 89.16 0.0659736105557777 0 noncoding 0 0 0 0 -0.0250074812358964 0.843899383305906 -0.0250074812358964 0.843899383305906 CCGCGCCGAGCCGCACAGGAGGCGGCGGGCCCCGCCGGCCCCGCGCGCAGCCGCTGGGTCCTAAAGCCCTTTTCTCGACGCTTCTGTGGAAAACCTTCACATCCCTTCAAAAATCTGCAGCCCCGCGGGACCCGGAATTGGGATCAGGATGCCTTTCCAGCCCGGGCTCTGTTTTCTGGACCTAAATAACGCCGAATCCCTCAAAGGATCAGCGTTTCCGGTCACTTAAAAAAAACAAGCAGAGCCCGCAGATGCTTTTCAAAGTGCAAGTATATCGTCACGCACCCGGAATGTACCTTTTCATCCGACCAAGTCTGAAGCATTGCTTCCAAGGTGAAAGAGCATCATGGTAATCACGAAGAGCTAACGCTTTCCTTCCCAGAAAATCTGCTTTCAAAAATATTGATATATTCCTCCATAACTGACTAATTCAGCCTGCCGAAGACCAAGCCCTAATAAGGAAATGATTTTTTAGGCCACACCATACCTCTCTCTGCTTGCTGCTTTGTGCCAGCCCCAAGACTAACACAATGCCCTTTAACTCATTGGATCGGTGACAGCCTTCTGGACATCAGGATGGGCTCAGCCACTCCTCCCTTTGTCACTCAGAACTTGAGCCTTCATTAAATCTCTACAATTCGAGTTCTAACCTGTTCCATAAGAGATTGGACTTGAATAATTGTGAGATTCCTTTCCCCACTGAAGTTAGGTGATATCATCCATCTTCAGGCATCTCTGGCATTTTTCTCTTTAGGAATATGATGGCAACACAAATAGAATGTGAAGATTCAAGAGGAATGAAGACAAAAAATGTAGAGAACATGAAGGACTGTTTTTCTTCATTCTTCTGTGGCATGGGAAAATCTATTTATAAGGGTTAAGGGGAGGTATTCAGCCCATAGCTGAGAAGTGCCAGGCCCATTCTCTAAAAGGATTACTAATATCTATTTATAGCACCCAGCAGGTCATCATGTTCTGGATCAAGATACACACACTGTCACAAGTACAGAAGAGGCAGCCACACTCCATAAACTATTCATTTGATATTTTATTTGACACCATCTTAACTTTTAAAGGAAAAATTAACTTGTAGCTTAAAATTATGTTAGAGCACACTCAATATTTAGCATTAGATTTTATTTTTAAGGCAAAGGATTATCACAGGTTTTATATTAAGTAGACTGTACATAAACAGGCAGGGGGTGATAAGCCAATAAATAACATTGCTTTAAACACTATAGAGTCCAGTTTATGGCATATTATTTTCTAACAGTACAAAACTAATACAGAAAATACATTTGAAAGATCACAGTGTTCAGAACATTGTATAACAGCAGTTTTAAAGACAGTAAGGTGCATCTCTAAGCTTCTGACTCAACCCTGCTTCCAGAGAATTCATTATACCATGCACTGGCTGTAAGCAAATCCCCCACACGAAGGGGAGGCGACATCAACTGACCTGTAGCACTTCCCCCGCCAGGAACAACCAAGAACAAAAGCTAAAATCCGATGAGCATTGATTGGCAAGTTGATCCTGTTCAGCCAGGCAGCAGCTAACTTGCCCCAGTGACCATGTCTTTGTGTATTAAGTGTTTGCCATTTTGTCCTTGAGAATGTATGCATTCGAGCTTGTGATTGCTAGTTTCTTTGTCAAATACCTAAATGGATTGTGACTAAAGATCAATTGAATGTCATGTATTGCATTATACTTTCTTGCTCTGACTGAAATACCCATTATTTTCTTGAAATATTAAGTACAGAATAACAGAGTTCTAGAAAGTGATTTTTTTGGCATAATAATATGTAATATACCAGAATACTTGATAACTTGGTTTTATTATAAAATACAGTACTACAACATTTTGTGATATAGCAAAATATCTGACACAATGTTCTGCTCTAATTTAGATGTAACTGCTACAAATACGTCTTTGAAAGCGCCTCAAAGTACCCCTAAAGGAATATAATAATTAGCAATGAGTTGTAGAACCTTTTTTGGCAAAAAGAAAAAAAAAGGCATTTTTTAATAAGTCTCTCATTTTGTGTGCAAGGCTTTCAAAATTTTAGTTATATACAACATATAACTGGTGTTGGATTTAATGCTATTGGAAATTAGGCTTTTAAAATCATAATAACTAATCTGTGTTATTTGGTGTATTTTAAAATAAATTTATGTTTTTAACTCTGCATGTGTGCTGAGGCAAATGCATTGTAAAAAGAGTACAATTTTATTAATACTACTAATTTATTGAGCAGTTCTTCAAAATTCAGTAATACCTTAAATCATGCATGCATGCGAAATCACTTCAGTCATGTCTGACTCTTTGCAACCCCATGGACTGTAGCCCACCAGGCTCCTCTTTCCATGGGATTCTCCAGGCAAAAATACTGGAGTGGGTTGCCATGCTCCCCTCTAGGGGATCTTCCCTACCCAGGGATTGAACCCAAGTCTCTTGAATTATAGTATGTATTCATTCCTAAATACAGTTAGGAATAAGCAG TCONS_00248004 . 5' 170 TCONS_00248004 . 5' 170 EMBV3_33881 CACAATAACAGTCTCCACCATTGTACTCTATTCCTTCCAAAAGCTCTTCCTGGTGCCAAG Gene BVT0102_313217 - 1 EMBV3_31753 GK000003.2:6659068-6672011 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171806 1 XLOC_103919 Coding TCONS_00171806 XLOC_103919 Coding Coding DDR2 3:6665973-6847222 j TSS128079 7831 1 TCONS_00171806_9 855 0.0937300472481165 19 0.956898834745763 0.000315598930484936 0.000420404271497366 0.000182148218566853 0.000155506138069112 0.000301174973718394 0.000128977258051328 0.000111549225706768 0.000207130550129217 0.000253453123873343 2.61869333242177e-05 6.77350930096694e-07 4.39380220508447e-06 4.02996402836813e-05 4.40499511153681e-06 8.53867372059622e-05 3.79366655885658e-05 4.6233963246098e-05 0 0.000383876499597546 0.000217467229045668 7.45748833481111e-05 2.27424340944459e-05 4.97368106322013e-06 3.50057713423148e-05 0.000253549931914492 0.00062237653076359 0.000266539333237515 1.22655862534502e-06 2.25317986033309e-06 3.29676478773815e-05 XM_005203519.1 DDR2 PREDICTED: Bos taurus discoidin domain receptor tyrosine kinase 2 (DDR2), transcript variant X2, mRNA. 0.0 5777 100.00 0.408887753799004 NM_006182.2 DDR2 Homo sapiens discoidin domain receptor tyrosine kinase 2 (DDR2), 0.0 3957 91.76 0.352317711658792 TCONS_00171806_9 sp|Q16832|DDR2_HUMAN DDR2_HUMAN Discoidin domain-containing receptor 2; 0.0 1697 97.43 0.998830409356725 3 coding 0 0 0 0 0.00570183651585079 0.967449519185839 0.0163973955439589 0.787681958107141 AGAGATGGAGAAGCCTGAGCAGAGAGCTAAGTTTTTGGCACTTACTAGTGGTGTTGGAGGGTCCTGAGTTTGGGAGAGGACAGCTTTTAGTACTTCTGGTTTTTCAGGGGAGTTGCAGACTTAATGGTGAGAAGGACATCTTCGGGAGATCCACAACTGGTCCGGGGTTCAATGCTCTAGAAAGTTCTAAGGCTGTGACTTGAAGCCAAGAAGCTGAAATAATTCAAAAGAAGCAGAGGCCAGCAATTCCTGAGGATCCTGTCCCTCGGAGAATGCTCTGCACCCATTGATGCTCCAGTTCCAACACCATCTCCTGAGATGATCCCGATTCCCAGAATGCCCTTGGTGCTGCTCCTGCTGCTGCCTATCTTGAGTTCTGCAAAAGCTCAGGTTAACCCAGCTGTATGCCGCTACCCTCTGGGCATGTCAGGAGGCCACATTCCCGACGAGGACATCACAGCCTCCAGTCAGTGGTCAGAGTCCACTGCTGCCAGATATGGAAGGCTGGACTCGGAAGAAGGGGATGGAGCCTGGTGTCCTGAGATTCCAGTGGAACCTGATGACCTGAAGGAGTTTCTGCAGATTGACTTGCACACCCTGCACTTTATCACTCTGGTGGGGACCCAGGGACGCCATGCAGGGGGCCATGGCATTGAGTTTGCCCCCATGTACAAGATCAACTACAGTCGAGATGGCACTCGCTGGATCTCTTGGAGGAACCGGCATGGGAAACAGGTGCTGGATGGAAATAGTAACCCCTATGACATTTTCCTAAAGGATTTGGAGCCACCCATTGTGGCCAGATTTGTCCGCTTTATCCCAGTAACTGATCACTCCATGAATGTGTGCATGAGGGTGGAGCTTTACGGATGTGTCTGGCTGGATGGCTTGGTGTCTTACAGCGCTCCAGCTGGACAGCAGTTTGTACTGCCGGGAGGCTCCATCATTTATCTCAACGATTCTGTCTATGATGGAGCTGTTGGGTACAGCATGACTGAAGGGCTGGGCCAGTTGACTGATGGGGTGTCTGGCCTGGATGATTTCACGCAGACCCACGAGTACCATGTGTGGCCGGGCTATGACTATGTGGGCTGGAGAAACGAGAGTGCCACCAATGGTTACATCGAGATCATGTTTGAGTTTGACCGCATCAGGAATTTTACTACTATGAAGGTCCACTGCAACAACATGTTTGCTAAGGGTGTGAAGATTTTTAAGGAGGTCCAGTGCTACTTCCGCTCTGAAGCCAATGAATGGGAACCTAACGCCGTCTCCTTCCCGCTGGTGCTGGATGACGTCAACCCCAGTGCTCGCTTCGTCACTGTGCCCCTCCACCACCGCATGGCCAGTGCCATCAAGTGCCAATACCATTTTGCTGACACCTGGATGATGTTCAGTGAGATCACCTTCCAATCAGATGCTGCAATGTACAACAACTCCGGAGCCCTGCCCACCTCGCCTGTGGCCCCCACAACCTATGATCCAATGCTTAAAGTTGATGACAGCAATACTCGAATCCTGATTGGCTGCTTGGTAGCCATCATCTTCATTCTCTTGGCCATCATTGTCATCATCCTTTGGAGGCAGTTCTGGCAGAAAATGCTGGAGAAGGCTTCCCGGAGGATGCTGGATGATGAAATGACAGTCAGCCTTTCCCTGCCCAGCGAATCCAGCATGTTCAACAATAACCGCTCCTCATCACCAAGTGAGCAAGAGTCCAACTCCACTTATGATCGCATCTTTCCACTCCGCCCTGACTACCAGGAGCCATCCAGGCTGATACGAAAACTTCCAGAATTTGCTCCAGGGGAGGAAGAGTCAGGCTGCAGTGGCGTTGTGAAGCCAGTCCAGCCCAGTGGGCCCGAGGGTGTGCCCCACTACGCAGAGGCTGACATTGTGAACCTCCAGGGGGTGACTGGAGGAAACACCTACTCTGTGCCTGCCGTTACCATGGACCTGCTCTCCGGAAAAGATGTGGCTGTGGAAGAGTTCCCCAGAAAGCTCTTAACATTCAAGGAGAAGCTGGGTGAAGGCCAGTTTGGGGAGGTTCATCTCTGTGAAGTGGAGGGAATGGAAAAGTTCAAAGACAAAGATTTTGCCCTAGATGTCAGTGCCAACCAGCCTGTCCTGGTGGCTGTGAAAATGCTCCGAGCAGATGCCAACAAGAATGCCAGGAATGATTTTCTCAAGGAGATAAAGATCATGTCCCGGCTCAAGGACCCAAACATCATCCGTCTCTTAGCTGTGTGCATCACTGAGGATCCTCTTTGCATGATCACTGAGTACATGGAAAATGGAGATCTCAATCAGTTTCTTTCCCGCCACGAGCCACCCAATTCTTCCTCTGCCAGTGTACCCACTGTCAGTTATGCCAACCTGAAGTTTATGGCTACCCAGATTGCATCTGGTATGAAGTACCTTTCCTCACTTAATTTTGTTCATCGAGATCTGGCCACACGAAACTGCTTAGTGGGTAAGAACTATACCATCAAGATAGCTGATTTTGGAATGAGCAGAAACCTATACAGTGGTGACTACTACCGAATCCAGGGCCGGGCAGTGCTCCCGATCCGCTGGATGTCCTGGGAGAGCATCTTGCTGGGCAAATTCACCACAGCAAGTGATGTGTGGGCCTTCGGGGTGACTCTGTGGGAGACTTTCACCTTTTGCCAGGAACAGCCCTATTCCCAACTGTCAGATGAACAGGTCATTGAGAATACTGGAGAGTTCTTCCGAGACCAAGGGAGGCAGACTTACCTCCCTCAGCCTGCCATTTGCCCTGACTCTGTGTATAAGCTGATGCTCAGCTGCTGGAGAAGAGACACCAAGCACCGGCCCTCTTTCCAGGAAATCCACCTTCTGCTTCTTCAGCAGGTGGACGACTGATGCTGTCAGAGCCTGGCAACAGGAGTTCTTGAGAGGAGCAGGTTGAGTGTGGAAGAGTCATCTGCTGCTACTGCTTGGGATTCACACTCTTGCCTTGGAGATGGTATGACCAGCAGAAAAAGAAAGCTTGAGGCTCTGGCTTCAGAATCCATGGATACTGATAACACTGTTAAATAAAAGTCCCCTCAGAACAGATTCTGAGCTTTCACACTCCACAGATCCTCAGATTCAGTAGGAAACAGGAATGAGATGGTCTTGAAGTCTCTTCCAGTTCTGATGTATTCAGACCTCAGTGGATAATTGAATCTACAATTGCTGCAGACTCAGTTGTCCAGTCATCTCCTGCTCTGAAAATTGTGGTCAGCAAAAGAGATCACGTGAAGAAGTCACGATAATAGTAGTAATAGGAACGCCTGCCACTGGCTCAGTGCTTTAAAGTTTATCATGTGTTTCTACATACTTTATCTCATTTGGTATCTGCAGGGCCAGACATGTTCTCATGTTCTTTTATACTTGGGACCTGCCACACACTCTGTCTTCTCAAGATCAGTAATAACTTCGTGTATTATTCATAGTTCCCCAGAGAAACAGAACTTTATATATATATATATATATATATATATATATGATTTATTATAACGAACTGGGGAATTGGGTTACATAATTATGGAGACTGAGGAGTTCCACAAAGCTGGTGGTGATGTACTTCTGAGAACCAGAAGGTCAAAGTTTTAAGTCCCAGTTGAGAGCAGAAGACTGATGTGTGAGCTCCAGTAGTCAGGCAGAGAGGGTAAATACCCCCTTACTTTTTTTCTTCTATTTAGGCCTTCATTGGAGTGGATGATGCCCACCCATGCTGGAGAGGGCAATCTGCCTTAGCTCACCAATGAAAATATTAATCTCACCTGGAAATACCCTTATAGAAAAACACCCAGAAATAATGTTTAATCTGGGTGCCACATGTCTCAGTCAAGTTGATGTATTAAAGTTAATCTTTCCATTTCAATAGAATCAAAGGGACTTGAAATCAGGGCCTGCAACTTGTTCTCCTTGATCCATGAACATCTGGCAGGGCTACATTCAGACCAGGCCATGACTTCCCATGTGGCAAGAGGAAATATGTATGTTCTCTTTCCTTTGTCTAATATCTTTCTACTTATTTCTTTTTACAATTCTGCCTCAAGCCACTGCATTGCATGATACCATAAAAAAAAAAATCATGTTTAAAATTAACTTAGTATGTCTAGATTTTCCTGGCCTTGAGTCATAGAGGTGATCTGTTTCAAGCAACTGGCAAATATATATTGTCATGTACAGTTATCTTTTTCTGAGATGAGGAAGATTCCATCTTCTGGCACTAAGACTTTTGTACTACAGACACAGTTTTAACTTCTCCCTTAGTCATACACGTTGAGTTCAGCAGCAGAAATCTAAGACAGCCATCCGGGTAAATGATCAAGGCTTAGAATCTAGAATTTAAAAGTAGGTGGACTTTTAAAAAAGAATGAAGAACTTTTAAAGAATAGACGAATGAAGCTAGGAATTATGTAGAAAAGGAGGTAGGAAAAGGGATGAGAAACTGTGGGGCCTTGTTACCTTTCTAGGAAGTCATCCTCTTCATGATATATGTGAAATGTTTTATGTCCAGCTTGTGGTTTGGGGTAGTAGATTTAAGTTTATACTTTTGCTAGTGAATGTGGTGATAGCTAGGTCCAAATCTTGATGAGCTGTCCAGACACATATGTGCTAAGAAAAGATCTGGAGCCTAAAGAGGCACCCAAGGGGAAATGCGATTTTAATGCTATGGAAACACCACTCGCAAGTGTACAAGACTGTATAGCAAAGGGCACCATATGAACGTGGAGCAATGAATGTGCATGTGACTGGATGGGGAGGCAGCTGCGGTTTAGAAAGGAGGCTGCATAATAAGGGGTGATAGAGAGAAGGATGGGGGAGGTAAGGGCAGCAAGACAGACACAGATGGTGCTGCTGAGAATCCATTCTGAAGCATGAAAGCCAATCTCTGAGGAGAACAGAAAAAGTAAGTGTCTTGAAGATAAAAGATAAATGTGTAAGGAGAGAGGGGAAATTCTGGATGATAGAGATGATTAAAAGTAGTCATTAAAAAATGAAAAGTGAGGTGCAGAGTATGACGTGGAAGGGAGCTTTTCAGAGTTTTAAGAAAAGATAAACCCATCAAGAATATAAAAACACATAAGCAACCACCAGGGAATGACCTTTTCATCTCATGGGATATAGGAGAGGGAGGCAGTTTGAACAGGGGTGTTCTAGACCACCTCCAGTGGCAGGGATCACATGGTGGTGAAAAGAGCTCAACTCTGTCTGAGCTGGACTTGGCTTTCCAAGTGCTGCTTTGGAAATGAAGACCAAGAGAGGAGTCGGGGAATTCATGTTAGCTCACCAGGCTCTGTCTTCCCCTCTTTGTTCATGTCACTGAAATCCACTTTAGATAATCCTCATCATTGTTGTGCCCAGAGCGGCCACAGGGAAACACTGGGACAACAGGCTTAGGTTAAACTAGATGAAATCTTGTTTGATATTGCACCAAGAGGTACATGCTATGTTGGAACCATGTATTTTTCTAGTATGATCCAGGCATCCCACAAGAAAGCCATGATGTGGGGCTAAGCCATTTGTTTAAAATAAAGGAGAACAGAAGAAAGGAAAGCGGTGAAGATGTTCCAAGGAAATAGTGTAAAACAGAATAACATCTGTTTTGTCCAAAGCTACAAAAATAAACGGAGAAAATCACAGTTAAGTCTTAGAGTACTCCCAATACAGAGCTATTAAGTCTTTGATCCTAAACTGAGTTTGTAGACCTGGAATTTGCCATCTTGCTCTTTTCAGTGAGATCTCTGATATCTGGCCGTGCTTATGATAGGTTTCTGAAAGATGTAGACCCAAATCTAGGCTGAATTTCCTTCTGAATTAAAATTTAACATTTTTATAGAAACAGATGAATGTCTTTTCCACTTGGTAAATGTCTTAGAATGCTAAATTGAGATAAAAAGAGACTGGAATGGTTAAAGGTTTTTAGATTTCTGGCATTTTGAATTCTCTGCTGCCATTAACTGCATTCCTTGGTAGCAAACATATGGAGGGTAATTGTTTGGTTTACGTATCTTTTTTTCCCCCCAGCTGTTATATTGAAATACTTTAAGACTCACAGGAAGTTGTGAAAATAGTTCAGAGTGGCCATTACCTAATAGCAGGATTTCCCATTGACAACATCTTATGTAATCATAGTCCAGTTTCAAAACCAGAAAATTGACATTGGCATAATACTAGTAACTAAACTACAGACCTTACTCAGATTTCACCAGTTGTTCACATGTATACATTTAGTTTCTGGATGCTTTTAACCCTTGCTGATTTGTAACCTGGTCTTGTTTGGCTGCATCACGAAAGACATTATTGGGATACAATTCTGTCAAATCCTAAAGAGGATATAACAAATTAACCTGTTCCTTTATCCAAAGTAATATCCTGCCTAGACTGTATCCATATTTTCTGACGAGTTCGGCTGTTCAGCATCTGAAACAATCCAAAAACAGCTTAGAAAAATCAGATAACACAAAGGACAGTAAGACCCACAGCTCACTAGCTAGGTATAGAAGGAAATTATAGATGGTTTCTGCAGTTCTTTCAAGTAGGACTTATATGGTGGCAAGGAGAGGACTTTAGAATAAATCAGTATTTTGATTAAGAACTAGGTGGCATTTCATTCTTGGCACCAGGAAGAGCTTTTGGAAGGAATAGAGTACAATGGTGGAGACTGTTATTGTGTGGTAAAACACTACTCTCGGAATATTAGAGAAGTTTCATTTACCTAAATGTCTATTCTTAAATGGAATAACAACCACATTGGACTAAATTAAGTACAGGTACAGCAGCAACCAGGCCCAGAGGTTCAGGAAGATAGGGGAGTCGAAGCTTTAGTTTTGTGGATTACAGTTTTGAGTTCTGTAATGGCATTTTTAAGCTGCCCTGTTTAAGGGTCACGAGATTATACCTGAGTTCACCTCTGCATACCCCACATCCTATAAAGTTCCTAACACATAGTGAGCACATCATAAATATTTGCTGAATTTTTTTTTGAATGAATAAAAGGTAGAAGCAGAAACTTGTCAACTGGCATAACTAGGGTGAATTTAGGTAGAATTGCTTTGCTGTAATGTAGAGGGTTTATTTTCAAATGAGGAAAGAGGAAAATGTGCCCAAACTTGTACATCCTCCATTTATATGTTTACTGATGTTGAAACTGATCTATGTAAATGTCTTATTCTTTGAGGTATTCAGACAGAAATGCAAGGTTCTTCTCTGCATGGTACCCCATCAAGAGCAGGTAGAGACTCCAGCCCCAAACCCAGCTCTTTTGGAACAAGATTTTTAGTTTCTCCTGCAAACACCTTGTCAACAACTTCTCAGGCCTCCAAAGGTGAAAGATGGGAGTCCCAGGCTAGCTCGTGCTTACCCACGTTCGCAACTGCATGTAAAGGAAGAATTTGTAAAGAGACTCGAGGGAAAGCACAAAGAGAGAAGGGAATCACTTTTGGTGAAAAACTTTCTTGAAAAGAGGCTTGGAGAGAAGTGCACGTTGATCAGATTACTACAAATGCACCAAGGGTTTGTAACCTAGCCTATTCATCTTATGTCCTTCACTGTTCATGATATCCTAGTCTTCTACCCCATTGTCTGGCAACTTTTTCTGAGGACCGAGTTTCTAAAGCAGTGTGGTGCACTCTTCCTATGAGGAGGAAACATCTGGGCTTTATTCTTCAAGCGTTGGAGGTTGATGTGTCCTGTCAAGGGGTAAAAATAGCAAATTGATTTTATTTCTGCTTAAAACTATCATAGTCATTCCAAAATAGAACGCATAAAAATTCTCTGTATTAGAAAAAGAAATGAGATACCAACTGTATAT EMBV3_02405 GACATTGAATTTGGTGGAACAGCAATCATGGCCAAAGAATGCTAAGCAGCCAGAGCGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32728 CTATCGATGGATCGGTCGGCTCTTTGAAATTAGTCCATTTGAACCCTGGACCACGAGGGA Gene GeneID:404188|NDUFA9:NM_205817:11_cdna Constitutive 0 NULL GeneID:404188 5 GENE NDUFA9 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa EMBV3_36986 TCTGAACAGTCCCCTGCCTGATGAGATAGATGCCTACAGCACTGAGGAAGCTGCTATTTC Gene GeneID:507243|CLIC6:XM_002684585:96_cdna Constitutive 0 NULL GeneID:507243 1 GENE CLIC6 NULL chloride intracellular channel 6 EMBV3_39182 GGGAGCAGCAGTGACATTTGAACCAGCCTTTGGAGGAAAGCCATTTGCCAGACGCAGAAA Gene BVV0102_265872 + 1 EMBV3_40060 GK000001.2:84633406-84656318 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001426 TCONS_00001423 TCONS_00001425 TCONS_00001427 TCONS_00001424 1 XLOC_000357 Coding TCONS_00001424 XLOC_000357 NonCoding Coding - 1:84636113-84638674 - TSS730 323 3 0.875 0.000404527015637011 0.000744839308939173 0.000193234399028267 0.000348371198522716 0.000228499541635853 0.000188246128172932 5.69317267722684e-167 9.03843144868928e-05 0.000317559488599767 0 0 0 0 0 2.80544171880487e-27 8.1769655889895e-05 0 0 0.00273171001386959 0.00130154710725719 1.67038680657529e-130 0 0 0 0.000746165538996203 0.000184860684552 0.00144607374030163 0 0 0 0 noncoding 0 0 1 0 0.0389631242851733 0.767329183375678 -0.00999019725692504 0.858733239674293 GGGTCAAGCGACTGGAGTAATAAATTCTGCTTTGGGTCAGGACGCTGAGGGAGCAGCAGTGACATTTGAACCAGCCTTTGGAGGAAAGCCATTTGCCAGACGCAGAAAGAAGGAAGCAGAATGCCTTGGTGCCTCTGATTCGGACTCAGTCTCCTGCACTGCGTTGCCTTCCCTGAAGCCTCCAACCACAGCCTGCAGACTGGCACCTGCCTGTTTGTTCCTGTTACATATTTGGCCACACACAGAGCTTCCTTTTTTGATGTCTCCATCTAAACAGACTTCTCATCCACAGTTGCCCTCGACCTTCCCTGCTCCTCTCGCAG TCONS_00001426 TCONS_00001423 s 5' 0 TCONS_00001426 TCONS_00001423 s 5' 0 EMBV3_27102 CTTCTGCTCTTCGCCAGCCGCCTTTTCAGACCCAAAGCCCAGCCTCCAGGTCGGGTGTGA Gene GeneID:100140928|LOC100140928:XM_002688101:176_cdna Constitutive 0 NULL GeneID:100140928 6 GENE LOC100140928 NULL hypothetical protein LOC100140928 EMBV3_14691 CCCCCTGTTGGTACATTTGGTTACCTCATTTTGCTGTTTGTTTCAGATTATGGAAAGCTC Gene BVT0102_086920 + 0 NULL GK000008.2:60932583-60970859 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227835 TCONS_00227841 TCONS_00227846 TCONS_00227849 TCONS_00227838 TCONS_00227845 TCONS_00227843 TCONS_00227848 TCONS_00227847 TCONS_00227844 TCONS_00227833 TCONS_00227834 TCONS_00227842 TCONS_00227850 TCONS_00227837 TCONS_00227840 TCONS_00227836 TCONS_00227839 1 XLOC_138349 Coding TCONS_00227845 XLOC_138349 Coding Coding RNF38 8:60965521-61057110 j TSS170012 7127 1 TCONS_00227845_5 432 0.0126280342360039 13 0.922326068917325 0.00343001496589791 0.00401859189861296 0.00304794476439994 0.00181185827167191 0.00135137817838587 0.000930167588852676 0.000515853710669697 0.000905075341918638 0.00200989849816251 0.000261316704505152 1.59274232991308e-05 0.000168369507507068 0.00056712911595764 1.38526898948153e-07 0.000530859019210248 0.000299697004125926 0.000343732655615879 4.40456812315363e-13 1.08858884087272e-07 0.00198358471673463 0.000202093627885867 0.00143041278443652 1.8533033019165e-09 0.00125345515403917 0.000705414850742277 0.00115998035401602 0.00173582364650005 0.000399291625813643 1.66025426598786e-16 1.86025684312962e-14 XM_005210094.1 RNF38 PREDICTED: Bos taurus ring finger protein 38 (RNF38), transcript 0.0 8980 100.00 0.698470604742528 XM_005251364.1 RNF38 PREDICTED: Homo sapiens ring finger protein 38 (RNF38), transcript 0.0 6648 89.37 0.698330293251017 TCONS_00227845_5 sp|Q9H0F5|RNF38_HUMAN RNF38_HUMAN RING finger protein 38; 0.0 862 98.61 0.997685185185185 6 coding 1 1 1 1 0.121263841249514 0.520917491817249 -0.0808026785745538 0.16466602691196 GCCCCATGGTAGTGTTGGTGCTTCTTTTCAGTGCCAGTCCATCCATCACGACCACATTTGTCATGATGACAGTGACAAGATATCTCCCGGGGCCAATTCAGCACCTCTACCTGGCCATCCTAACAAGGTGATTTGTGAAAGGGTGAGACTTCAGAGCCTGTTCCCTCTCCTCCCAAGTGATCAGAACACTACCGTTCAAGAGGATGCTCACTTCAAAGCTTTCTTCCAGAGTGAAGATAGTCCAAGTCCCAAGAGACAGCGCCTCTCTCATTCAGTCTTCGATTATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAGCCAACATCACTTCTCAGGGGAACGATGCAACACACCTGCACGCAACAGAAGAAGTCCTCCTGTCAGGCGTCAGAGAGGAAGAAGGGATCGTCAGTCTCGACTTAATTCCATTAGTCAAGATGAAAATTATCACCATCTCCCTTATGCACAGCAGCAAGCAATAGAAGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACACCCTGCTGCTCATCCACCCCAGCAGAATGCAGTAATGGTTGACATACATGATCAGCTCCATCAGGGCACCGTCCCTGTTTCTTACACAGTAACAACAGTGGCACCACATGGGATTCCCCTCTGCACAGGCCAGCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGCTCTGTGGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAAGCATGTTCTGTTCAGCACTTACCAGTACCGTATGCTGCATTTCCACCCCTTATTTCCAGTGATCCGTTTATTTTACATCCTCCCCATCTTTCTCCCCATCATCCTCCTCATTTGCCACCTCCAAGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAAAGGATAGAAAACGAAGTGGAACTCTTAGGAGAACATCTTCCTGTGGGAGGTTTTACTTACCCTCCATCTGCCCATCCCCCGACATTACCTCCATCAGCTCCTTTGCAGTTCCTAACACATGATCCTTTGCATCAGGAGGTTTCGTATGGAGTACCTTATCCTCCATTTATGCCTCGGAGGCTCACAGGACGCAGTAGATACCGATCCCAGCAGCCCATACCACCACCCCCTTACCATCCCAGCTTACTACCATATGTGTTATCAATGCTTCCAGTGCCACCTGCAGTGGGCCCAACTTTCAGCTTTGAATTGGATGTGGAAGATGGAGAAGTAGAAAATTACGAGGCCCTGTTAAACCTAGCAGAGCGACTGGGAGAGGCCAAGCCTCGAGGACTGACTAAAGCAGATATTGAACAACTTCCTTCTTACCGGTTCAATCCTAACAACCACCAGTCAGAACAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTACTTAGAGTTTTACCCTGTAACCATGAGTTCCATGCCAAGTGTGTCGACAAATGGCTTAAGGCAAATCGTACTTGCCCAATCTGCCGAGCTGATGCTTCAGAAGTGCATCGGGATTCAGAATGACCAACCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATACGGACTATCCATTGAACTTAATCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTTATACTAACCGTGTGATTGGAACTCCAAAGACTTTTTCTTTAGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTTCATTAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTGAGTGGCAATGAGTGCAGCGTATGACTGTTGATGGTAAATGTATCTGTGTGTGTGAGAGAGAGAATGTGTGAAACTACTTGTGTGAGGGCATGGTAGCTAACGTGTGTATGAGATCCTATATACCAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTATTTAAACAGCACTAGTACTGTACACTGGTTTCCCCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCAACGATAAGCATTGAATACTCCATCCCCTTCCCTCCCAGTGAATGGAATGAGAAAAGCCTTCTTCCTTTGCTTCAGGCAGCTGTCACCTTCTCTTCGTTGGTGGTCCCAACTGGGTCACTTAAGGAAAAAGTGTAATAGATTCTCACTCCATGAACCTGAAATTTTGATTTTTGTCGTGAAAAAGAAATTTTTAAATCTCCAACTTGCTGTTTCCAAAAAGAAGGTGCAATATCATACATCATCAGTTAGCAATATTAGCATTTCAATCAGTGATTTGAATGTTGATACTCTCTTGGTTTTCCTTTACATTTTCAGTAAGCTTCTTAGCCAGACGTGCTTGTGATTTTTTTTTTTCTTTTAATGTTTAGGTTTGTAGTCTATTCTGAAGATATTTGAGTAATATATTTCTAAGAATACCACTGGTCCCATGAAGTCTCACCTCTTCTAATTCCACCAGAAAAAAATCTGTTAACTCAGCTTGACTTCTGATATGTTATTTGTTCAAGCTCCCACAGGCAACAAAATTGTTTTAAGAAGACTATGTTTCTGTTCTGCCAAGCTCCAATTTTGAAAGTTGTCTAGTTCTTCTCCCCTCAGTAAACGTGCTTCTCATTGAAATCCTCATTTCCAGGGTGGATCAAGTGCTGTGACAGCTCGAGTTCCTTAGACCTGGTGTGCTTTGATGTTTTATCACTTTTCTTTTTTGTTGAATGAGAAAAAAATTAACAGGTGTCCAGAATACTTGCAGTATAAATGAAGATTTGATTTTTGTATAAAAAATAATGCTGTAAAACAGGAATTGACCTGCATTTAGTTGCTCTGAAAAGAATACATAGCTGTGTGGATTTCTTTGTTTTTTTAATAGGTTCCTTGAGCATAATTCAGATCGTTTCAAGTCATTTTTCTAGCAGTGTTTGAATTCCCCTCTCATTCTTCTAGTGTCTTCACCATTGTCTGCCTCTTCGTGCAGTTGCTGTCCTTCTTCTGGTTGCAGTGGCACAAGCTGCAGTTCTCCAGTCAGGACTGTGATGACTTGCTGCCAACCTCAGCTTTCGTTTGGCTGTGTCCGTTTTCTACTCAGTGTTAACTACTTGTTACTGCCATGCTACTTGCCTTCCCTTGAAGACTATAAGCTTATCACAGCTTAGAGTTCAGTAAAGTCAATTCACACAGAAGCACAATTTTGCCCTTTTCCAGACACTGTTGCCTCTATCTAGTCCTACAAGTAGGATTTTGCATACTTTGTTTGCCCCTGTATTTGTCAGTGCATCAGAAATACATCTAAACAGTGGTGAAATGCACATGTTACTTTTAAATCATTAGAGTATTCCCTACCTGTTCCTAATGAATAAAGTGTGTTAAAGACCAAAATTACTGGTGTAATAATCAACTACATTACAAATCACGTATAGTTTAATCTTTATTTTTTTTAATTAAAAAAATCATGTTTAAAATGGCAAAAGCCCATCTTATACATAGACTCTTTTATATAGCTGCAAAAAATTTATATCTGTACAGATCTAACATAACATTACTACACTCAGTATTCATTTTATTGAAGCATGCAAGTAAAGCACTTTTTCTAATTTATATAGATACTTAATTAACAAGGCACACTGTACTAATGACTAGGAAAAGTAGCTCTTTCTTCCCTCTCTGGGATGATGAATTCTTGTCATACTACCCCTTTTCCATTAAATTTTTGAGAGGCCGTTGGCAATTTAGGAGGCAGCAGGGTCTATTTTGGTAAAATCCAGAATTGTTGCACTCTTGTGGCTGATCTCTCTTTGGGAATGTCTTTTCTTCGCATGGGGCTCTTAGAGATGTGTGCAGATTTGCTTATTAAGTAGTTAGTGTGTGTTAGGAGCGTACATGCATGTGTTCCAAACCAGCTCAACCTAGCCACATTTAGCAACCGTGTGGCTAGCAGAAGAGAAAGAACAGTTGATTTGTACCCAGCTGTTGACTCCTTAGGTGATGCACCAGATAGCAGGCAGATGTTGGTTTCTTGCCTTCTTCCCCTTTCCTCCTAAAACAATATTGGCTTTACCACCTTAACTCGGCTGTGTTTTTTTGTTTTCCTTTGCATGAAATACCACCTTTGTTGGTTTTTAGCACCCCCTCTTCCCCAAAAAGAAAAACAAAAACAAAAAACAAGGCCTCCAGGTATCAAGATCTCATTAGGATTTTCTGTCCTGAATTTTTTCAAGCAAAATCTAGAAAATGTGAAAGCCTATTTAGATTTTATACACTCTCTGAAATGTGATTTGTTAAGATTCTTATATTTGGGCCTCTTATAATATTTTAAATGAGATCTACCAACTCACTTACGAGAATATTTTTCACAGATATCTTTAGGCCTTTATTAGAAAGCTATTTTCCCCCTGTTGGTACATTTGGTTACCTCATTTTGCTGTTTGTTTCAGATTATGGAAAGCTCACAGGGGTGTATTTTGGAATCATTTGCTGAGTCATTTCCTCAAATCATACTCCATTGTATCAGTTAACATATAGTTTTAAATGTACGTATTATAAATATCTGTAACCAAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACATTGGGTTGTGTTTGGTGTTACTGTGTTAGGTAGGGAAGGGTAGGGGTCATGTGTGTTTGGAGGGAGGGATGTAGGGGACTTCCAGCAGGAAAATAGAGCTCTTGAGCTCCGAGCAGCCAAACTTAACTTTGAGGAAGTAATTCAGATTTTGTTTCTGTGTTTGTGTAAACGACTTAGAAACATAAAACCAACTTGCTTTATAACTCGTGTGGCAGATACTTATATCTTCAAAAAGGCCAAGAAGATAGCTCGAGTGTAGGCACATGTACATGGTATGAGCTCATTGAACAGTAAAGTTACATTAAGTGGGTGCCTGGAGTTCTTTCTATTTGTGTCAACCATAAGATACAAAAGATAGTTGGGCAGATTGGTTCACGTTAGATATAGTATGTTATGTCTAACTTGTCCACATAATACGGAAAGAGGAGCTCATTTTCCATACATGTTTGTTGAATTGCTTTCTTTTGACTAAAAAAGGAAGAGAGTAAAGCCATCTACTTATATATTATTACATGCTGAAAGTGGAAATAGGATGAAAAAAATGAGGCTAAGTAATAGAACCGAATTCTCCCTCTTTCAGGAAGCAGTCCTTTGGCTCCAGTACTTCTTGACAGAAGCATTCAGAAAAGTGACCAATCAGGGTCACTGATTGTGTCCCTCAGTTTTCCAACATACTTGAAAGAATGTTTGCATTTGAACTGTGAATGTCTCAAAACTTGTTGTCTTATATTACCGAGGCATTTGCTGCTCAGTCAGTACCTGTGCATTCTCTCCCACCTCCCTACTTACTACTGTAGGCAGCGAGTCCCATGCGGCTGGTTCTGACCAAGGGACCATAAGGGTAGGCCATGCAGCGCTCTCTTCTGCCGTGGTGATGGCAGGCCTGGATCCTGAGTCACTGCCTGAAGAGCCACTGGATTCCACGGATTTTGTGTTAACAGTAAACTGAGGTCCTTAGACTACTCTTTGTCAGGACTTTGTCTTTGCCCATTTATTCCCCCCTTTCAAAAGACTTAAGTCTGTTTAGTCTTATTCTTACAACACTTTGCTAATACTAATCCTCAAGTGTACCAGTTAAACACGACTGACTACAGTTAACTTGCAAGGTCAGATTTGCACCACATGATAAAATTGTTCAGGTCATTACCAAGTATCTCAGGTCTCTGTGTGCTTCAGGCTAATGATAATGAAACATTACCTTTGATATCCCTAGACTTCTCAATGTTTTCATTGCATGCCTTAATATACTACAGTATGATTAGAAATATTTTACTGTTTGTATAGTTGAATGTAATTTATTTCTATATCAATACATAAATATGTAAAAAGCAGACTTAGTTTCTGTGAACATCATATATAGCTTCCCTGGCTAACATTTAAGAACAGAATTTCCTGTTTGTCAGTTTAATTCCCAAATTAAACATTTGTTTATAGCACCTTCCAGATTTGTACCTATTTAAAAGATTAACTTTCCAGTCAGAGAATTGGGCATTCTAAAAGAGCAACAAACTTTGAACCCATACAGAGTGTGTGGGGTAGACTCCTACAAAGATTGCTCTAAAGTGCACATGCTCTTAACCTTTTTCATGTGGTTCTTCTGCCTCCCAAACTGGCAGGAACTATAGGAATGAGAAAGATTGAAGGGGAAAAAAAGAACATAGTGACAGCCAGGGATACTGAATGTCACCTTGCAGTTTGGAAATGGGCTGTAGGGTCAGTATAGATGTTTCCTCGCTACAAAGATGAGGAGAATTAACTCGGGATGAAGGAACCCACGTTCCCTTCAAACCTCTATTTCTTGGTCTACACGTGGAAACAAAGTTTAGTGGCTGGTCAACAAAAGGACCTACAGCCTACACCCAGCACCCTGCATTGTATACAGTCGACAATGTCACCAGCTGCCTCCCTTTCAGTGTTAGAATCCCCTTCCCACAACTCTTCTGTGATAGTAAACTTAAGAGATCCTAAGGCAGGCTCCCTCTTCCCACTACCCTAGCACCTTCAGGTTTAGATGAGAGTAAGTTTTATATTGGACTTCCCTGGTGGCTCAGACGATAAAGCGTCTGTCGTGCGGGAGACCTGGGTTTGATCCCTGGGTTGGGACGATCCCCTCGAGAAGAAAAGTTATCCATCCTTTTTGGT EMBV3_22768 AGGTCAGAGTGAGTGTCTCGAAGGCTGGAGAAGGAAGATGGTAGTGCAGTCGAGCGTTAT Gene GeneID:100298838|LOC100298838:XM_002687959:59_cdna Constitutive 0 NULL GeneID:100298838 5 GENE LOC100298838 NULL similar to bicoid interacting protein 1 EMBV3_04738 AAAGAGCCCATCATCGAGCTCTTCGTCAAGGAAGCCTGCAGACCTGCAGAACTTGGCTCC Variant GeneID:286823|CLIC4:NM_001080218:39_cdna 516^625 1 EMBV3_25344 GeneID:286823 2 GENE CLIC4 p64H1 chloride intracellular channel 4 EMBV3_05338 GACGGGCCGACCATCAAGTTCTGTCAGGAGTCCACATACTACATGGAGGGGAACCTGGGC Variant GeneID:504557|UPB1:NM_001101050:31_cdna 481^642 1 EMBV3_10510 GeneID:504557 17 GENE UPB1 NULL ureidopropionase, beta EMBV3_31832 GGTTTAGTTTTGGTAGCATAGCTCAGCATGAGGCTGTCAGGTGTTTCTCACCTAAGGGCG Gene GeneID:532603|LOC532603:NM_001110080:57_cdna UTR3_Alt 2 NULL GeneID:532603 26 GENE LOC532603 MGC140222 hypothetical protein LOC532603 EMBV3_24705 GGTAAGAGCTCCAGCTGCCAGAGCCTCAAATAATATAAGTTTCTAAAAGGCTATCTTTTG Gene GeneID:521790|PI4K2B:NM_001102064:180_cdna Constitutive 2 NULL GeneID:521790 6 GENE PI4K2B MGC152558 phosphatidylinositol 4-kinase type 2 beta EMBV3_05080 GAGCTACCATTCAGCTGTGTTGAACTCTCTGCCTCTTGAATACCCCTCTGTCCTTGAATG Gene BVV0102_023619 - 1 EMBV3_31943 GK000011.2:7492872-8927584 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01163 GACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGA Gene BVT0102_368781 - 1 EMBV3_32651 GK000026.2:50701240-50787411 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199364 TCONS_00174805 TCONS_00100195 TCONS_00171428 TCONS_00204211 TCONS_00174809 TCONS_00174808 TCONS_00209974 TCONS_00000529 TCONS_00204210 TCONS_00174806 TCONS_00206552 TCONS_00174807 8 XLOC_121017 XLOC_104695 XLOC_060438 XLOC_103815 XLOC_124371 XLOC_128485 XLOC_000141 XLOC_125074 Coding TCONS_00000529 XLOC_000141 Coding Coding - 1:45088092-45096984 - TSS270 8451 4 TCONS_00000529_10 143 0.745473908413206 2 0.0497131931166348 2.01012307707297e-05 1.49871009079085e-05 1.36625311347943e-05 4.53987540290904e-06 1.24531364209072e-05 5.00814608360259e-06 8.46442312822931e-06 1.24185267133133e-05 4.13121620626016e-05 0.001823279532659 0.000814409045036406 0.000443886703423644 0.000426802436486759 0.000631969837416122 0.000420788496196143 0.0164351832051245 0.0118459757916584 0.0133511864103435 1.34853947675417e-05 9.74488686084332e-06 4.71379726774531e-06 0.0113995265993752 0.0116294525732748 0.0115848317310599 2.19528616543606e-05 1.81962347473363e-05 1.11450810621553e-05 0.00508280936174051 0.0025318551055437 0.00742716955264329 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1225 90.86 0.102828067684298 TCONS_00000529_10 sp|Q08DI6|RNF11_BOVIN RNF11_BOVIN RING finger protein 11; 6e-28 104 42.47 0.895104895104895 0 noncoding 1 1 1 1 0.0450297516627036 0.769473730118356 0.00899590186576138 0.845664037517258 TATTTCGAGAAACTGATCCCAATTCTTTATTTTCCATGGTCTACTTTTATACACTGAGATGTTATGCAAAAGTCACATGGGGTCAGCAGTCCTGACTTTTATCAAAGTCAGGTGCTTCATACAAATGTATACAGAGGTCTTAGGGGTATTACATCATCTTCTGGCCAGGGGGCCTGCTGACAATTTATGACCCTCTCCTTATGACAGCGGTCAGTCAACCAGGACACTTATTTCTCCAGGGGTGATTATTCTTAAAAAAGACTCCACCTTCCGAAGGTACCAGATAAAGTTACATTCCTATAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAACCTAAAGTCTAACGTGATGGTCCAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTGGCTCAACAAATGAAAAACCCTTCACCAATACAATTTCTAATCAGCCCACTACTTATACTAATGGTTTTCTAACTTTTCTAAGGAATCTGTTTTTAGAAGGTTTAAAGCATCTCGTGCCTCTCACGGTTGGGAGGCTGTGAGCAATCACTTGTGGCCGGACAAGCCTGTCAGGCAGGCTAGAGAACCTTCAAAGGAGTTTGTAGGTTAAAACACTCTTGTCATGCCCAGGAGTTTTTATTAACTGGAGCTGTAAGTTAATTCCTTCTCCGAAAGAGGTGGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAGAGCACAAAGTAGTAAAGTAGGCAGGCTCTGGTTATGGGGGTAGATGCTCGAGGATTTCCAGGGGGACTCCTGAGACTTGATCCCGCCTTTGCGTATGTCGAGCCTCCTTCCTCATGACCTTTGCCATGGGTGGAGGTCCTCACACCGGCTCCCAACAAGAGTGAAATAGTTGGCTTAAAGCTCAACATTCAGAAAATGAAGATCATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAACTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCTGTCTAGTTAAGGCTATGGTTTTTCCAATGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCATTTGACTGATGCTTTTGAACTATGGTATTGGAGAAGACTCTTGAGAGTCCCTTGGACTGTGAGGAGATCCAATTGGAAGGATCTATGTTGGAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGCGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGAAGGGGACAACAGAGGATGAGATGATTGGATGGCATCACTGACTCAGTGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATAGACAGGGAAATCTGGCATGCTGGAGTGAGGTTGGACACGACTGAGCAACTGAACTGAACTGAAAATGAAAAGATCTAGCTTGATTTTTCTTCAAAGGTAATTTATGATTTATTATTTAACCTGTGTCCTATGATTGCCAAATTTTTTAATATTATTGGAAAATAAATGAGTTGAAAAATGACATTACAGGAAGATCAATTATACAACTAGATAATTTATTTCAGGATTCTGCAGTATTTTGAAGCTTGGAGAATATTCTGGTCCTTAGGTACAGCAGCTAAGTGTGATCTGAAGAGACCCACGCCGGATGGTTTTCTCAGACTTAGAGTACGACATGGGGTGCTCCAGAGCCCTGAAAACTGTATCTTTTTACAGCGCCAGCATTTCTCCTTTTGCCATCCTGGCTTGAGAGGATGCTGGTAGCTTAGGTGTTGTCTTGGGAATGAGGAGTAGGATGGTTCTGCTGCTAAGAACTAGTAACAGTCTCTAGCTGCATCAGGACAACACAACCTCACAAAGCAGTGAGGCCACTGGCCACTCACAAAACAGAGATGGCCACTCTGTCTGGCAGACTGAAGGAGCAGAATTCCAGGAAATGCCAGTTTTCCATAATTGTATCATTGCCATGTTCTGTGCCTGGGGGACATACTTTATTAAAGAGGTTGGGTCGATTAGATTTGTTCTGACTGGTATCCAGGTGGGTTACTCAGGTGGCTGCCCTGGATTACCTGCATGATGAGATTATGTGACCCAAGGGGTTCCATACCTGATGAGGTTATATCAATGATGGGGTTAAGCTGCATATAAGAGCTCACCATCTGAAAGGGGCTTAGTTTCTAGAGAGACACTCCGTGGTGACAGTGACCCCAGCAGAGAACTGGCTTTGTCATCTTCTCTATAGATTTGGATCCTGACCTGGGAACCAGGAGGTGTCCTGCAGAGCCGGCTGTCAGCAGCGGACAGGGACCTCACCCCCAGGCCTGAAAGATGGGGAACTGCATCGGCTCCAGCACCGGGGACGACCGGCCGGTCGCTCGGTTTCCGGCCCCCCTCCGAGAGCGCAGAGGCGGAGACGGCCCGGGGGCGGGGGGACCGCGGGGTCCGGAGCGGCGCGGGGCGGGGGCAGCCCCGCCGGGAGCGCCGCTGACCTTCCGTCGAAGGATCCGCCTCATTCAGAGCCCACCTCGAGACGTGTACGGAAGGGATGGATGCGAGACGAAGACCACCGAGTGCGCGGTCTGTCTGATGGACTTGGTGCCCGGGGACCTCATCCGGCCTCTGCCCTGCAAGCATGTGTATCACCTGGACTGCATCAACCAGTGGCTGACCCGGTCCTTCACCTGCCCGCTCTGCCGGGGGCCCGCGGACGCCGCGCAGCCTTTGTTTGAGGACGCTCTTGAGCCCAGACCCCTGGTGTGATTGCAAGGGACCCATCATTTTTACTGATTTCCATGTTCCGTACTGTGCCCAGATAGCCAGGGGTTAGGAATTTAAATCGTGCACAAAGGTTTATTAAAAGTTCCTGGAATGTGGCAGATGTCCGGGAACCGTTTCTAATGTTTTAGAAAGATAGGGAGAAATAGCGGGTGAACCTTGACCAAGTGCTGAGAGGTATAATGACGTCTTAGCATTGTCCTCTTGCTAGAACTGTGCACCCTGTTTCAGCAGCTCTACGTGTTGCATTGCATCTGTTGAACGTCAGGGAAAGATAGTGGTTACTCTTCCTAAATGAAATCAGATTCTTCTCCCCCATCCAACTTAAAAGTTGCTGGCATTTAGGCCACAGTTTTATGAAAAGTTACAATTTATACAACTGAACTAAAATAAAATCAAAGTATGTATGAGTGAATACCTGAAGAATGTTATTCTCAATTGAGCCTTCTAAATGGTCTTATCCGTTTGTTCTCCATCATTTTGAGACCCTTAACCCTTTCCTCTTATAAATCCAAACCAGGTGAACAAAGTGTTCCAGGGAAGAACAGTCCTGAGCAGGTTTATTATCTGTGTAATCAGGGCGTGTCCAGGCACTTTAGCTGTGTTTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTATCAGGTTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTGCATTGCCGGTTCCTTCTCCGGGGGATCTTCCTGACCCAGAAATCAAACCCGGGTCTCTCACATTGCAGGCAGACGCTTTACCATCTGAGCCACCAGGGAAGCCCAAGGGAAGATAGTTCTCCATTAAACTGGAAGTCAGCCAGCTTCACTCCAGTTCCACTTTACAAGCCTTATCAATTTACATTTTCCTACCAAAGCAAATACTTAAAGTTTGAACTTTCAAAATTTTCTACTTTTTATTTGTCTTTATCTCTTATGGTTGTGAAGAGCTAATTCATTGGAGAAGACCCTGATGCTGGGAAAGATTGAGAGCAAGAGGAGAAGGGGGTGACAGAGGATGAGATGGTTGTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTATACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGATAAGGGGCGCTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAATCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACGGGAAGCCTTCCACTGACGAAGAGGGGAGCGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCCAATGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCACTGCCCTGTGCTTAACTCTAGAGCTCGGGTCAGGGCCACCAGCTCCGCTAACTGAGCACTAGTTTCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGATAGTGGCAGGATTTAAATTTCCACAAACTTTAAGTTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAATGCCGTTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGACCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCGATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATACGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAATTTTGTAGATCCCGTGACAAACTTTGTTCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAATCCTTTCTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGTTCCACATTCATGAAAACAGATGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTCTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCTGGGGGCGGCTTAGATCCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGATTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCTTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTGCCTAAGTCCCTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGTGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATCTCTTACCCCTTGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCAGGTACGGGGGCAAAGTAAGAGGATAGGAGGGAGCTGAAGAT TCONS_00000526 s 3' 6565 TCONS_00000526 s 3' 6565 EMBV3_39238 TGGAAAGCTAGTCTTCGTTGTGGTACGTGGGCTTCTCACTGCGGTGGCTTCTCTGGTTTT Gene BVT0102_201423 + 1 EMBV3_33517 GK000013.2:36448898-36610251 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048247 1 XLOC_028379 NonCoding TCONS_00048247 XLOC_028379 NonCoding NonCoding - 13:36457252-36458153 - TSS35423 901 1 TCONS_00048247_1 44 0.335183129855716 1 0 0 0 0 0 0 0 0 0 0 0 0 7.93715019848042e-06 0 6.2650318023252e-05 0 0.00023450903606153 0.000386956635268044 2.78478179596945e-05 0 0 0 0.000115304554173725 0.000132366971740068 0.000186067026761716 0 0 0 0 2.15520801011516e-05 8.67471362657412e-05 NM_001098936.1 RNF135 Bos taurus ring finger protein 135 (RNF135), mRNA. 1e-24 118 70.00 0.269700332963374 0 noncoding 0 0 0 0 -1.76471196513385 0.0495176276707776 -0.0416021726763625 0.550066308390436 ATCAAACGCACACCCCATGCAGTAGAAGCACAGAGTCTTAACCACTGAACCGCCAGGGAAGTCCCAGGCTTTACTTCAGATTACAGTAAAGCAGGCTGGATCCAAAAAGGAAGCACTCCATTTTACCAGGAAGTTACCCCAAAACAGCCAGTCATCCAGCCAGTAAGGGAGATAGCACCTCTTGGGGAGTAAGTGGAAGTGCTGTGGTGATGGTACACAGGCCTTACTGCTCCAGTTGATTGATCCGTGGTTTATCCAGCTCCTTCCTCAGTGTAAACTTTCCTCTGCTGACTTTGCAAAACAATATCAAACCTCAGGAGAAAGGTAAGCAACTTTTCAAACAGAAAAACTGATTCTTTGTTTTAAAAAACGTTCATTGTATCTACTTTTTACCAATTTTACTCTTTTTGTGAACAAATGGTTTTTAATTTTTTTTTAATGTTAGGAACTATATAAACTAGCAAAATTTCTCCCCCCAAAAAGCTTATCACTGCCTGTAAGGCTTCTCTTTCACCCTTCAGCTATTTGTCTTTGAATCAAAGCAGAGGGAAAGCCTAAAAGCGGTTTCTTGGGGCCCTTTTAGTCCGTTAAGTTTTGGAGAAATTACACCACTTTGGTATGTTTGGTAAAGCACAATTTGCCTATAAGACTGGTGAATTCTAGGACTTTCCCGGTGGTCCATTAGTGAAGAAGCCACCTGCCAATGCAGGAGACACAGGTTTGATCCCTGATCCAGGTACATCCCACATGCCTCAAAGCAGCTAAGTCCATGCACCACAACTGGGCTCTAGAGCCCAAAACCAGAGAAGCCACCGCAGTGAGAAGCCCACGTACCACAACGAAGACTAGCTTTCCACGGCTAGAGAAAGCCTGCTCAAAGCAGCAAAGACCCAGCTCAGCC TCONS_00045088 TCONS_00045091 . 5' 6064 TCONS_00045088 TCONS_00045091 . 5' 6064 EMBV3_04767 CTTCAGACCGTGCTGCAAAGCCAGTAATGAAACAACCTGAGACTGGCATAAACTCAGGCC Gene BVT0102_132303 + 0 NULL GK000003.2:120339475-120383560 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14604 GGACGGCCAAGAGAAGCTAAGTTAGAAATAGAAATTACCTCTCATGCCAAACGCAACCGG Gene BVT0102_008920 + 0 NULL GK000001.2:46412647-46415218 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003274 TCONS_00003270 TCONS_00003273 TCONS_00003272 1 XLOC_000816 Coding TCONS_00003273 XLOC_000816 Coding Coding ZBTB11 1:46380834-46413675 j TSS1684 6541 1 TCONS_00003273_9 1013 11 0.80115712545676 0.000537482444070627 0.0005359655683017 4.32891141427667e-06 3.73719694042455e-07 0.00022789489746013 0.000105030232547484 0.000204610005010366 2.64169128953018e-08 7.72163738344208e-07 0.000474410029262637 0.000267895441991125 0.00023188668820858 3.27318617093596e-05 0.000510533296524759 7.57886181986118e-08 0.000518632630413099 0.00107310356803547 3.18986195737354e-07 0.00021423133894141 0.000444944861805867 3.71213355976279e-13 1.09286314133738e-08 0.00126738243128358 0.00144428010084865 0.000644938049566599 0.000354672204899343 0.000192034617251602 1.00051644474974e-07 0.000212371281798826 0.000421413838271164 NM_001205556.1 ZBTB11 Bos taurus zinc finger and BTB domain containing 11 (ZBTB11), mRNA. 0.0 4154 99.96 0.352392600519798 NM_014415.3 ZBTB11 Homo sapiens zinc finger and BTB domain containing 11 (ZBTB11), 0.0 4563 85.40 0.597462161748968 TCONS_00003273_9 sp|O95625|ZBT11_HUMAN ZBT11_HUMAN Zinc finger and BTB domain-containing protein 11; 0.0 1870 88.61 0.999012833168806 7 coding 0 0 0 0 0.00143841878520784 0.990122263525338 0.00195013603054026 0.969254883069164 ACCAGTTGTATAACATTTTATTAAAACCTTTCTCTATTGGCTCAAAGGCACAAGAGAATCTCCGGTTGTGTTTGGCATGAGAGGTAATTTCTATTTCTAACTTAGCTTCTCTTGGCCGTCCAGAAATTGTTTACTTAACATTTTAATCTATTTACATCAGTTTTAAAAGACGTATATTTCACACTGAAGCATTGAAACATACACATCCCATGGAGAGTGGATTTGGACATCAGTTTTGGGGACGGATGTATCTCCACCTTCTCACACCTCCCTCCCCTAGCTGTGGTCTGAAATGAGTGGCCCTAAGTAAACCCCAGGCCTGGTAGTTGTATTTTTCCTCGGACTGGGAGCTCACTTAGCTACAGCCAGAATATTGAAGTGCCTTAAGTATGCCGTTTGTTAATTGCTGCAGTCCCCACTGGCAAGTGCCTTGGAGACCTAGTATACCCCGCTTTCTGAGCCCACTGCTTTCATCTGCAGTCGGCCCTCACCTGTCTCCGCAGGGCTCAGCGCCTCAATCAGCGACTGCAGACCTAGGCAGGGTCAGGAGAGAGTTGGCTTTCAGGCTCCAGTAAAGCACCTAAGTGCCAGACCCCGGATGGTTTGGAATGTCGTAGGCCTGAGTCTCCTAACTGCTAGGCAGACTCAGTCTACGGAGAGATGACCAGGGCGACCCCTCCCGTCTACCAGTGAAAAATCTGACATAGGACCTACATCTCACCTTGGAAAGTGCAGTTCGAATCGCCGTGGCCTTTGGTGCATTCAGTATATGTTGGGTGTAAAACCGAGTGTTTTTCTTCCCCAAACTAAAAAAAAAACAGTGCTAGCTCATCTTCACCGCTCCTTGCCAACATGATTGACTTAATGGGTAAATTGTCACTGCGTAAGCTGATCACTGCAGAATTATCCACGGGTAGTTTGGAACCAGCAGTATCTTAGAAACTATAGTAACTCCTACCACGGATGGATTTAAGTTTTGTAACACTTGACAGGAAAACTACATTTCCACGTGAAAGGACTTTCTTTGGTCTTATATTCAGGGGCTGTAGACCTCAGTATTTTGTGTTTTATGTTTTTGGTTGTCTCAAAACGCAGACGGAGAAGATTCCATTGCACCTTGGGGTATCAGACAGGGTTAACTGCCCAGCAGCTCCTACACGTGCTCAGAGCAAGGGAAAGAAGGGGGAAATAAAAAAAGGGAAACTGCCAGGACTTAATATGTCTGCTCAAACTCTCTTGGCTCTTCCAGGCAGGGCCTACCCGCTTCCAAAATGTCCGCCCGCAGTCCTGACGTCACTCAGTCGGCTAGATCAAGCCAGAAAGCCATGGCGCTCCAATCAGGGTTCAGCTCCCTCACCCACTGCCCTTGATTTGCGTCACTTCCGGTGGTGCAGCAGCCATTTTGTCAGTCGCCAGCGGATACCGCGCGCTGGAGAAGTGCAGTTCCTCCTGGTTACCAACTCGTCCGTTCTCACTCTGCGCTGCGGGCGCCGTCGAAGAGCACTCACTGTAGATACAACCGGTCCTTCCCATAGTACCGCCGCTGCTGTTGCATCCGCCCGGAGCTAGTGCTCTGTCTTCCTTCCCTGCCACTGACAGGCGCCTTCAGGGAGCCGCCGTCAGCGATGTCAAGCGAAGAGAGCTACCAGGCCATCCTGCGCTACCTGACGAACGAGTGCGAGCCGTACGCGCCAGGCACCGAGGGCAATGTCAAGCGTAAAATTCGCAAGGCGGCCGCTTGCTACGTGGTGCGGGACGGGACCTTGTACTACCAGCGGCGGCAACGGCACCGCAAGACGTTCGCCGAGCTGGAGGTGGTGCTGCAGCCCGAGCGGCGCCGGGGGCTCATCGAGGCTGCGCACCTGGGCCCAGGCGGCACTCACCACACCCAGCATCAGACCTGGCACGACTTGTCCAAGACGTATTGGTGGCGAGGTATATTAAAGCAAGTCAAAGATTACATTAAACAATGTAGCAAATGCCAGGAGAAACTAGATCGCTCGCGTCCTATATCGGATGCTTCAGAAATGCTGGAAGAATTGGGACTAGATCTTGAATCTGGGGAAGAAAGTAATGAATCAGAGGATGACCTGAGCAACTTTACTTCGCCTCCAACTACAGCATCCAAGCCTGTGAAAAAGAAGCCAGTATCCAAACATGAACTTGTGTTTGTTGACACCAGAGGAGTAGTGAAACGTTCTTCTCCAAAACATTGTCAGGCTGTCTTAAAACAGCTGAATGAACAGAGGCTCTCTAACCAGTTCTGTGACGTTACTTTGTTAATTGAAGGAGAAGAGTATAAAGCTCATAAATCTGTTCTGTCAGCTAACAGTGAATATTTTCGAGATCTTTTTATTGAGAAAGGAGCTGTTTCCAGTCACGAGGCAGTGGTGGATCTTTCTGAAGTTTTAGAAATCTGTGAAAGTGTGCATAAACTAATGGAAGAGAAGCAGCTAACTGTGTATAAGAAGGGTGAAGTACAAACAGTTGCATCTACACAGGACTTACAAGAACAAAGTGGAGGTACAGCACCTCCCGTGGCTAACAACACGGGAACCACAACAACTTTATCCACTGAACTTGGGGATTGTGAGATCGTACTACTGATGAATGGAGAATTGCCAGAGCAGAATGGAGAGCTGGGACAACAACCTGAGCCCCAGGTTTCTTCACAGGCTGAAGCCACCGCGTCACCTGTGGGCTGTGTAACTGATTCCCATCCTGAAATGGAGTCTGTTGATTTAGTAACAAAAAACAACCAGACAGAACTGGAAACTTTAAACAGCAGAGAAGATAGCACAGTTTCTAGTACTCATCCTAAGCTTTCACAAGAGAATGTAATCAGTAGCTCTCCAGGAAACACTGATACGGGAAATGATACAGCAGCTGAGGATATCTGTGCTGAAGACATTTCAGAGCATAGGCAGGACCTTGACCCGTCCTCGAAAGATGAGGAAAATCTAGCTGAACCGACAGCACTGATGGACCAGAGCCCCGATGATGATACTTATAGAAGCAGACTTCGGCAGCGTTCTGTTAATGAAGGGGGATATATCCGACTACACAAAGGAATGGAGAAGAAGCTGCAGAAACGGAAAGCTATTCCCAAGTCAGCAGTTCAACAGGTGGCTCAGAAATTAGTTCAAAGAGGAAAAAAGATGAAACAGCCGAAAAGGGATGCTAAAGAGAATACAGAAGAAGAAGCATCCCATAAATGTGGGGAATGTGGAATGTTTTTTCAGAGACGATATGCCCTTATAAAGCACATACTGAAACATGAAAGAGCTAGAGATTACAAGTGTCCATTGTGTAAGAAACAGTTTCAGTACAGTGCCTCCTTGCGAGCCCACCTTATTCGACATACCAGGAAAGATGCACCTACTTCGTCCTCTTCCAGTTCCGCATCGAATGAGGCATCAGGGTCATCGTCTGAGAAGGGCAGAACCAAACGAGAATTTATATGTTCCATATGTGGAAGGACATTGCCTAAATTATATTCTCTTCGAATACATATGTTAAAGCACACAGGTGTAAAACCACATGCATGCCAGGTCTGTGGAAAGACTTTCATCTACAAACACGGTCTAAAATTACACCAGAGTCTCCATCAATCACAGAAGCAGTTCCAGTGTGAACTATGTGTGAAGTCATTTGTTACCAAAAGGAGTCTTCAAGAACATATGAGTATTCACACAGGAGAGTCCAAGTACCTTTGCTCAGTTTGTGGAAAGTCTTTTCATAGAGGCTCTGGGCTTAGCAAGCACCTAAAGAAACACCAACCAAAGCCTGAGGTTCGAGGCTATCATTGTACTCAATGTGAGAAAAGTTTCTTTGAAGCTAGAGACCTTCGCCAGCACATGAACAAACATCTTGGTGTGAAGCCATTCCAGTGCCAATTTTGTGATAAGTGCTATAGTTGGAAGAAAGACTGGTATTCCCATGTGAAATCTCATTCTGTCACTGAGCCGTACAGATGTAATATATGTGGCAAAGAATTTTACGAAAAAGCATTGTTCAGAAGGCATGTAAAGAAAGCTACCCATGGAAAAAAAGGACGAGCAAAGCAGAACCTGGAACGGGTGTGTGAACAATGTGGAAGAAAATTCACTCAGCTGAGAGAGTATAGAAGACACATGAACAACCATGGAGGAGTTAAGCCATTTGAGTGCTTAACATGTGGAGTTGCTTGGGCTGATGCCCGATCTCTGAAACGCCATGTCAGAACACATACAGGTGAACGGCCTTATGTCTGTCCTGTGTGTAGTGAAGCCTACATAGATGCTAGAACACTCCGTAAACATATGACTAAATTCCACAGAGATTATGTGCCTTGCAAGATCATGCTGGAAAAAGATACCCTTCAGTTTCATAACCAGGGAACTCAAGTGGAGCATGCTGTTAGCATCTTAACAGCAGATATGCAGGAACAAGAAAACAATGGTCCTCAAGAACTTGAAACTGTGGTAGTGACGGGAGAAACTATGGAAGCTCTTGAAGCTGTTGCAGCGACTGAAGAATGTCCGTCAGTATCTACACTCTCTGACCAAAGTATTATGCAAGTGGTTAATTATGTGTTGGCACAGCAGCAAGGACAGAAGCTCTCTGAAGTCGCAGAAGCTATTCAAACTGTTGAAGTAGAGGTGGCACATATTTCAGAAACAGAATGAATGTAGTAATAGAGATAAAAAGAAGCGACATCTCATGTATATTGAACTCACAGAACATTTGTTTACAATACTGTATGACTATCTGCCTGGAGTTTGTATGTACAGGCTCTGGGCTATTTGGTGGTGTTTTAACATACAACGATTTGTCTAGCTAATGGTTCTGTAGAAAAGTCCATTTACTGTAAACAAATTGAAAACAAATCTATTTGGTGGCAGTGGATTATCATGGTATACTTCTTACGAATTAATGTTTAAAAAGAACTGTACTAAATTAAAAACCGTACAGTTTTATTTGCATTTTGACTTGATTATATATACTTTTAATTTAAAAGGCTGTACTAATTGGCTTTCTTGTTTATTCTCAAAATATAGAGGTTCTGTGATTTCATTTGCCCTGTTTATGGGTTAAAAATTCTAATATAAAACATTTTAGTAGGATGCATAGGTATGTTACATTTTTTTAAATGCTTCACATCTGTGATTCTTGACTTACTATTTATTTTATCCCTTTATAAAGTCAGGGATTCTTTATTCTGTTGTAAAGCACTTAATGAGTTACATGTTGTAATCAAGTTTGCACAGTGTACTTAATCTGTATGGGGAACCCTTAAATGAATAGCTAATTTTTCAAATGCAATTCAAATGCATGAAATGCCTATTAAGCCTTACTATGCTAACCTTCAAGGCAAGTAAATTGACCATGAGCAAAGAACACTGTTAATAATCTCTGTTGATGGGAAGTTTCTCCTTGATAACAAGAAAATAAATGGGGGTGGGGGAAAAGGTTAAAACTAGGTTTGGTTGTTTGCAGCTTTTGTATCATGTTTAATTGTTTAATTTTGTTAAAAAAACTGCAGTTTAGAAATAGGATAGCAATATAGGTATCTACAGCAGTCCTGTGGATACCATATGATTGTCAAGTAATTTCAGAATATTGAAAATTCTTCAGTTCAACCCTCATTATAGTATACTACTTAAAGGAATTGATTATGGCCCACCAAATTGTTAAAAGTAAATTCTTTTTAAAAGTTGCCTGAAAAATTAATTTGTGTGTTTGATTTTTAAATTCCCACCTCTGTAAGCTATCTAATTTTCTCATTTTTCAAAATAACCATGGGGAGATATCACATTTCTCTCCTGGGATACTACCACTCAAGTTATAATTGTTAAAATTAAACTTCTAAGTATTAGAATAAGCTAATATAAGGTGTAAAATTAAGATATAAGCAAATCACATGTAAATCATTCCTAAAGCACAAGAAAAGAATGTGCCTTGATGTATATATATTATTAAAATGCTTATTCCGGTTTACTTTAAGTGGCTTAAAAGAAAAATAAATGTGATGCCATGCATGTGCTATACCTGCATATGTAATATTTGCATTTGCACATTTCCCATTGTTTCGGTAGCTGTGTGGCTGACTTTCAATTTTAAGTGGATTGACATAACAGTCTACAGCTTTATAATGGCTGCTTGTTTAATCGTATGTTTCAGTTAGTGAAAATGTATTTCAATCTAAAATTTGGAATTGTCTTTATGTTCCATTGTCACCACTGTTATTAGATTTAGTTAATTGGGTAAGACCATTAATGTATGTCATAAATATGTAAATAAAAGATGTTGAATCTTGTTTAAAGCATAAGCTTTGAAGTTAAGCTTGTCACTATTTTCAGCTCATAAGTCAGTTGCTGTTATTTATTATTAAGTTAATCCATTTTTAAAGAGGAGGGGAATTGAACACATAAAAAATAACCACTGAGGGAACATATAATACTATTAAGACTTATTATTAAACATAATCTTAACAACAAAATCAAAAGTAGTACAATTAACTGCCATGTTTGGATAATTTAAGTGTGTTTAGAGAATTACA EMBV3_40465 AGGCTGCCCATCAGCCCTCTACCTCAATCATCTCTGACCTCTATGACTCACACTGACTTA Gene GeneID:513928|ATF6B:NM_001083683:105_cdna Constitutive 0 NULL GeneID:513928 23 GENE ATF6B CREBL1 activating transcription factor 6 beta EMBV3_30875 CTGTGCCCTCTTCTTCTGGGTGCCTACTCTGCTCACCTGTGCCCTTATTCACCTCCAGAA Gene GeneID:783025|SPAG11B:NM_001098154:8_cdna Constitutive 2 NULL GeneID:783025 27 GENE SPAG11B NULL sperm associated antigen 11B EMBV3_03054 GATGACATGAGCAGTCGCATTGATGACCTGGAGAAGAACATAGCAGACCTCATGACGCAG Gene GeneID:767979|HSBP1:NM_001113316:74_cdna Constitutive 0 NULL GeneID:767979 18 GENE HSBP1 MGC128054 heat shock factor binding protein 1 EMBV3_22598 TGTTCAGATAAATCTGAATGGAAGAGTGAGTGGTTAAAGTACCACAGAAGACACTCCTGA Variant GeneID:509278|METT10D:XM_002695691:262_cdna 226^566 1 EMBV3_02570 GeneID:509278 19 GENE METT10D NULL methyltransferase 10 domain containing EMBV3_00592 CTCATATCCAGCATTTGAAAGGAGCACACATTAGGTGTTGGGAGTGGAAACCTGCGGTTT Variant GeneID:526913|MGC148942:NM_001080289:134_cdna 165^262 1 EMBV3_18909 GeneID:526913 11 GENE MGC148942 NULL hypothetical LOC526913 EMBV3_19125 GTGGCCATGTCCCCTCAGGTGTGTTCTCTGCTTATGTCTGGTTCATATGTGATGGGGTTT Gene GeneID:787694|LOC787694:XM_002699173:72_cdna Constitutive 0 NULL GeneID:787694 29 GENE LOC787694 NULL similar to olfactory receptor Olfr893 EMBV3_32363 GGCAAAATGACTAGAAAGAATGTGTAAGTCCTCTGTTCTTGGGTGTGATAGGCTTAGTTG Gene BVV0102_390819 + 0 NULL GK000026.2:5718149-6344785 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17350 GTAGTGCCACACGTCTTGCTTTCTCGTAGCTCCCATTTCTTGGCCCCACACTCATTTTGT Gene GeneID:513028|NAP1L4:NM_001038094:266_cdna Constitutive 0 NULL GeneID:513028 29 GENE NAP1L4 MGC134260 nucleosome assembly protein 1-like 4 EMBV3_00829 GTTTCCAACCGTGACCGTAGAAGCTGACACCTTTCTGGAACTCAGCCAGGGACACTAATT Gene GeneID:100300059|LOC100300059:XM_002700463:8_cdna Constitutive 0 NULL GeneID:100300059 X GENE LOC100300059 NULL similar to neuroligin 1 EMBV3_15581 GAACATGACTATCCAGGCTTGGGCAAGTGGAGTGTCAATCCATATCTACAAGGACAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21268 AGCTCGAGTTCCTTCACCCCAGGCAGTACGGTTCCTCCGACCAGCTCCACGGCAGGTCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22242 CTGAATCTGTCAGAGAAGCAGGTGAAAATCTGGTTTCAGAACCGCAGGGTGAAGCATAAG Gene GeneID:539228|GSX2:XM_002688254:165_cdna Constitutive 0 NULL GeneID:539228 6 GENE GSX2 NULL GS homeobox 2 EMBV3_10635 AATTTTTCAGATAAAAATATAGATGCAATTATATCTGGGAGGCAATTACATTGCTGTCAT Variant GeneID:506058|LRRC67:NM_001075238:13_cdna 347^513 2 EMBV3_15066 GeneID:506058 14 GENE LRRC67 MGC127941 leucine rich repeat containing 67 EMBV3_37674 CAAAAACAAAAACAAATGTCCACTCCATCCTGTCAACCGAACCACCTCTTTCCTTAGGAC Gene BVV0102_080085 + 0 NULL GK000008.2:59592581-59669822 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09208 TCAAAACCTTCTTGGTGAGCGGACACACGTCCTTCTTTACGGATCGGCCTTCTTTGGCAA Gene BVT0102_311383 - 1 EMBV3_33685 GK000015.2:76987499-77157185 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41787 GTGAACGTCAAGGGCAAAGGCCAAATGAAGACCTACCTGTACCCCAAGTGCACAGACAGT Gene GeneID:525482|ADCY9:XM_002697947:637_cdna Constitutive 0 NULL GeneID:525482 25 GENE ADCY9 NULL adenylate cyclase 9 EMBV3_40470 CCACACCTTCAGGGAAGGAGAATTTAAGTGAGAGAATATCATTGTGTCTGGGATCCCCTC Gene GeneID:617720|NUDT12:NM_001046608:14_cdna UTR3_Alt 2 NULL GeneID:617720 7 GENE NUDT12 MGC137455 nudix (nucleoside diphosphate linked moiety X)-type motif 12 EMBV3_10443 ATGCTTCTGCCCAAACCAGGGCAAGAGGAAGCTGTTTACCAAGCGCTGAAGAACGCTCAT Gene GeneID:521021|LOC521021:XM_002697890:471_cdna Constitutive 0 NULL GeneID:521021 25 GENE LOC521021 NULL similar to Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 precursor (E-NPP7) (NPP-7) (Alkaline sphingomyelin phosphodiesterase) (Intestinal alkaline sphingomyelinase) (Alk-SMase) EMBV3_24681 TCAGAGAGGACGTCTTTGCCGCAGATCAGGGTCACCTGGGCCACCATCAGTCAAAGATGA Gene BVV0102_349882 + 1 EMBV3_04945 GK000003.2:9702148-9705463 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171935 1 XLOC_103954 Coding TCONS_00171935 XLOC_103954 Coding Coding KCNJ9 3:9702761-9709562 = TSS128146 3920 1 TCONS_00171935_2 405 0.108163265306122 2 0.423823529411765 0 0 4.72141991209793e-06 0 2.33282292609375e-12 2.62962950192819e-12 0 0 0 0.000341125306960849 0.000550106673941308 7.75338708208735e-05 0.000139804499880134 0.000490498919716304 3.95878298916364e-12 8.98176848643794e-06 5.50586236670226e-05 6.400753161614e-06 0 0 0 0.000270702940688985 7.02095677712965e-05 4.27668578105198e-06 0 0 0 0.000242579939554328 0.000213008093428534 1.6871103655017e-05 XM_005203542.1 KCNJ9 PREDICTED: Bos taurus potassium inwardly-rectifying channel, subfamily J, member 9 (KCNJ9), transcript variant X1, mRNA. 0.0 7048 100.00 0.996683673469388 NM_004983.2 KCNJ9 Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 9 (KCNJ9), mRNA. 0.0 2051 84.28 0.468112244897959 TCONS_00171935_2 sp|Q92806|IRK9_HUMAN IRK9_HUMAN G protein-activated inward rectifier potassium channel 3; 0.0 741 95.56 0.997530864197531 1 coding 0 0 0 0 0.0116721651659997 0.948375985690855 0.000321873413687529 0.995996529836567 ATGGCTCAGGAGAACGCAGCCTTCTCGCCGGGCACTGAGGAGCCGCCGCGGCGCCGCGGCCGCCAGCGCTACGTGGAAAAGGACGGGCGCTGCAACGTGCAGCAGGGCAACGTGCGCGAGACGTACCGCTACCTGACCGACCTGTTCACCACGCTCGTGGACCTGCAGTGGCGCCTGAGCTTACTCTTCTTCGTGCTGGCCTACGCGCTCACCTGGCTCTTCTTCGGCGCCATCTGGTGGCTGATAGCCTACGGCCGCGGCGACCTGGAGCACCTGGAGGACACGGCGTGGACCCCGTGCGTCAACAACCTCAACGGCTTCGTGGCCGCTTTCCTCTTCTCCATCGAGACGGAGACCACCATCGGTTACGGGCACCGCGTCATCACCGACCAGTGCCCCGAGGGCATCGTGCTGCTGCTGCTGCAGGCCATCCTGGGCTCCATGGTGAACGCCTTTATGGTGGGCTGCATGTTCGTCAAGATCTCGCAGCCCAACAAGCGCGCCGCCACGCTCGTCTTCTCCTCGCACGCCGTGGTGTCGCTGCGCGACGGTCGCCTCTGCCTCATGTTCCGGGTGGGCGACCTGCGATCTTCGCACATCGTCGAGGCCTCCATCCGCGCCAAGCTCATCCGCTCGCGCCAGACGCTGGAGGGCGAGTTCATCCCGCTGCACCAGACCGACCTCAGCGTGGGCTTCGACACGGGCGACGACCGCCTCTTCCTCGTCTCGCCTCTCGTCATCAGCCACGAGATCGACGCCGCCAGTCCCTTCTGGGAGGCGTCGCGCCGCGCCCTCGAGAGGGACGACTTCGAGATCGTGGTCATCCTCGAGGGCATGGTGGAAGCCACGGGAATGACATGCCAAGCTCGGAGCTCCTACCTGGTGGATGAGGTGCTATGGGGCCACCGCTTCACCTCAGTGCTGACCCTGGAGGATGGCTTCTACGAAGTAGACTACGCCAGCTTCCACGAGACCTTTGAGGTGCCCACACCTTCATGCAGCGCCCGGGAGCTGGCCGAGGCCGCGGCCCGACTGGATGCCCATCTCTACTGGTCCATCCCCAGCCGGCTGGACGAGAAGGTGGAGGAGGAGGGGGCTGGAGAGGGGCCTGGAGAGGAGGCGGAAGAGGAGGCGGGAGAGGGGGCGGGCGAAGGGGCTGGGGTTGACAAAGAGCAGAATGGCTGCCTGCCACCCCCAGAGAGTGAATCCAAGGTATGACCAGATTCCTTCAGACCCCTGTGGCAGGAGCAGACACAGGTACCTGGGGAGCTGAATATCGTAGGTGGAGAAGGAGTCCGGCAAGGTCCCTATGAATGCACCAAAGCTGGAGAGCCCCCTCAGAATCTCAGGTCTGGGATCCAACTTGGACGGGAGAGATCCTGATTTCAGGAGAATGGAGGGTGGGGATGGGTGAACTTACCCAGCCTGTCTGTGTTTGACCTTCCTGTCTGTTCATGGGTGGATGCGTGGACAGAAGGATGGGCCTGTGTGAGCCAGATGAGAAGATGGAAGCAGAGAGAGACAGCCAGTAGATAGATAAATGGGCTGACAGGCTGGTGGAGCGCTCAGGGCTGCCGCTAACTCACAGAGCATCTTTGTGCAAATTCTAAAAAGGCACCCTTTTCCTCTAGACTTACACCACCCTAAACCAGGGTGCACAGCTTGGGGAGCAGATGTGGGCTGCATTTTAGTCCCCACTCTTCTCCTCAGCCAGCCTCCCTGAGTCTGGCGCTTCTGTCTCACTGGACGCAGCAGCCCGAGCTAGCCCAGGGCAGAGAAAGCTGGAAGGGGGCAGGCAGAGAGGGAGAGGCTGTCCTCCTGCCTCCACCCTCACCACCGTGACAGGCTGAGGGCAGGCTGAGAGATTGCGAGGGCAGCTCAGTAGGGTGTGAAGGAGGGCTACAGGGAAGAGTTTTAGGACTAGGATTGTGGAATGACACAGGAGAGGTAAGGCTGGGGCTGGGATCCCCTCGTCCACGATGCAGGGAAGCCAACTGTAGGGGAGATGCCAGAGCTGGGGCCTTAGGGCCCTGGGGCTGGGCCTGGGCAAGGCAAGCCAGGGACGACCATCTTCTAACAGCAGAGGGAGACCTCAGAAGTGCCACTGCAGAGGCGGGAGGGGAGAGCAGAGTTGTGAAGAGAAGAACGAGGGGAGACATGGAGCTCGTGAATTCACTAGAGCTGGGACACGGGGCCCTCAGGAAACAAGACTCAGTCTTGGGGTACTGTGAGAGGGAGTCATTCACGTGGCTTACTGGGTGCCAGCTGGGTCCGGAGCACTGACCCAGGCATGTGTGGGGAGGATGGCCAGAGATCCGATTCCTATTCCGGAAATACAGCGCATGCACGTGGGAAAGACAGGGACATATGCCTTTGGCAACTGTTTCAAACCAAGAACCTGGGCAATCTCTCTGAGTACGGGTGGGAGGGCTCGATGATCAGAAAGCCGAGGACTGAGTCAGACCTAGAGAGTGACTTTAGCCAGCAGTTGTGAACTGGGGTGGGCATCAGGGTCAACCTGGAGGGCTCGGGGACACAGATGGTTGAACCTCACTCCCATAGTTTCGGACACAGTAGGGCTGGGGCAGAGACTAAAACTGCATTTCTAACACGTCAGGTCCTGATGCCAGAACAGGGACCACGCTTTGAGAAGCCCTCCCCTAAGCAGACTGGGGGTTCTGTCAGGAAGTGGGCATCAAGCTGAGGAGTCGCTGAGGATCCTTGGGAAGGAGACTGAAATATAACGGGTGGAGAATTGTGGTGGAGGGAAAGGGGACCCGGAAACCCAGGCTGAATAGTTTAACTCTGGACCCAGGGACTCACCCGTCAGTGAAAATAGGGCAGCGACAAGCTAGAGATGGGGTTTGGTGAAGATGAGTAGGCATAATAGATAAAGCAAAGCAGCTGGGAGGGCTTCAGGGGGTGTCCTGGGGAGGCAATGGGAGCTAGAGGAGGAAGGGCATCAGTGACAGAGGATGGAATCCCACATGGGACTTGAGGTAGGCTTAAACGTGGGAGAAGGTGTGAGAGAAGCGAGAGTCCAAATATCTGGGTGTGGCTGTGGCCTGCCGTTTGCCCAGCTGGGACAGGAGCCCCTGGAGACATATTCCCATGCCACGTGCATCCCCTTCCTGGCCTCATCTCAGTCACCAGTGAGGCCCTCCATCCCAGGATGATGAAGGGAGAGCAACAGCGAGTCAAGAAGGGGCAGAGACGGGAGGACCTGTGGCTGGGAGAGACGTGTGCACATGCGTAAAGTGCACCATCCCCAGCAGTGACCTCCAGCCCTTGGCCCTGGCTACATCCCACTCCTGAACTTTTAATAAAAGTCTGAACTCCTTGGTGGGGAGCACCCCACGGTGCTGCATTCCAGGCTGCGAAGCTGGGGTCCTATGAGACGCTGTACCTCCTGGAAGCAGGAAGGAGCCATGCCAGCTCAGAGAGGACGTCTTTGCCGCAGATCAGGGTCACCTGGGCCACCATCAGTCAAAGATGAGGTCCCTGCACCCTGGCATCAGTTGTTCACAAAAAACAAATGTTGGGGGATGGAATGGGGTGTGCTTTTGGTTCAATATGCTGAGACAGCTGGAGTCTGGATAGACGGGAGGGGACTGTTGGTGCCCATACTTGCTCCCGTGGGAGTTCACCCACTAAAAATGAACCCACTGCAGAGAACTGAGGCTGGACGGGAGGCCTGAGACCCTGCCGCCCCTCTCCTCATGTTCAGCCACCTCTCAGGGCCCTGCTGTGTGCGGCTCGGGGAGTCTGGAGACCGGGGTTCAAGTCCTGACTCTGTCACTACTTAGTTCTATGACTCTCGGCAAGTCGCGTCACTTCTCTGGGCTTTGGTTGCCCCATCTGTAAAAACAACACTTGGCAAACTGGTAATGCTCAATAAATGTTTAAATCACTGAGTTGAA EMBV3_34952 GTCATGATTCCCTGCTTGCTGATCCTATGTTCCTACACTTGCATTGCTGCTGCCATCCTG Gene GeneID:617297|LOC617297:XM_002693142:48_cdna Constitutive 0 NULL GeneID:617297 15 GENE LOC617297 NULL similar to Olfactory receptor 10A5 (HP3) (Olfactory receptor-like protein JCG6) (Olfactory receptor 11-403) (OR11-403) EMBV3_23546 TCCAGGTAGCAGTTTCAGGATGGGAGAAGCAAAGGAATGGGTACAGAATGGGATCAGGAG Gene BVV0102_250475 - 0 NULL GK000022.2:42134602-42997175 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38718 TTAAGCTGCCTGACACAACAGGGACTTGAACCTGGGTCTGAGGATGCCAGCGTGCCCCTT Gene BVT0102_145626 + 0 NULL GK000005.2:116556850-116616199 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202051 1 XLOC_123696 NonCoding TCONS_00202051 XLOC_123696 NonCoding NonCoding - 5:116574765-116574913 - TSS151619 148 1 TCONS_00202051_1 33 0.445945945945946 1 0 0 0 0 0 6.67186766207833e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000468141419465502 0 7.91777168477794e-05 0 0 0 0 noncoding 0 0 0 0 -0.0767165346068506 0.614731055827431 0.0806144396035345 0.137251160722237 ACAGCGCTGGGGCTGATGGGAAGACAAAGGGGCACGCTGGCATCCTCAGACCCAGGTTCAAGTCCCTGTTGTGTCAGGCAGCTTAACCTCTGCAAGGCTCAGTTTTCCCAGCTGTAAAATGGCACCATAACACCACCTAGCTCAGGGT TCONS_00196701 . 3' 5397 TCONS_00196701 . 3' 5544 EMBV3_19414 ACATCACTGGCTCTAAACGGCCCCCTGAAGTGGAGGTGCAACTATACCTACCTCTAGTGA Gene GeneID:100336428|LOC100336428:XM_002690631:11_cdna Constitutive 0 NULL GeneID:100336428 10 GENE LOC100336428 NULL hypothetical protein LOC100336428 EMBV3_38582 TCAAGGAACACTTCACCACCTTTGCCAAGAGCCTGGGCTTCACAGAGGAAGGCATTGTGT Gene GeneID:286858|PTGDS:NM_174791:11_cdna Constitutive 0 NULL GeneID:286858 11 GENE PTGDS NULL prostaglandin D2 synthase 21kDa (brain) EMBV3_33800 CGCAATCATTTGCGTTTACATCTTCTCCACGCTCCGCAACGCAGATCAGGGCACAATTCC Gene BVV0102_319152 + 0 NULL GK000005.2:25307192-25377044 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31849 AAACTCCATGCCTGTCCACAGCCCTACTGCCTCTGTTAGTGTAAGCGGGAACGGTCTTAA Gene BVT0102_036693 + 0 NULL GK000027.2:42307057-42430096 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15286 TAGGCTTTTTGAGAAGCATTGATCAATTTGGACTTAGAAAAGGAGAGTGACACACCTCTC Variant GeneID:535447|LSM1:NM_001017952:91_cdna 283^398 2 EMBV3_08739 GeneID:535447 27 GENE LSM1 MGC134081 LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_34949 CCAACCTAAATAGCATATTAAAAAGCAGACACATTGCTTTGCCAACAGAGGTCCGTCTAG Gene BVT0102_321413 - 1 EMBV3_39984 GK000026.2:43109286-43118087 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227858 TCONS_00227860 TCONS_00235743 TCONS_00227866 TCONS_00186858 TCONS_00081556 TCONS_00016541 TCONS_00232210 TCONS_00227862 TCONS_00016539 TCONS_00007246 TCONS_00220775 TCONS_00016540 TCONS_00227864 TCONS_00206647 TCONS_00227863 TCONS_00207893 TCONS_00251346 11 XLOC_138354 XLOC_144293 XLOC_112909 XLOC_050435 XLOC_008835 XLOC_141696 XLOC_002808 XLOC_134092 XLOC_125168 XLOC_126408 XLOC_154287 Coding TCONS_00016539 XLOC_008835 Coding Coding PNP 10:26663132-26673928 j TSS11496 5475 1 TCONS_00016539_15 189 0.487123287671233 3 0.493098656785549 6.53282008577477e-08 5.51498814097168e-13 3.05954265164515e-08 1.29226859557777e-13 3.02723111505078e-14 8.16491399353686e-07 9.85766124342597e-22 3.88500949755186e-05 2.18972997007341e-06 3.97804143564724e-06 0.000153163378643651 4.56478017970821e-05 6.11057234935998e-05 0.000470101478614512 1.20147375814341e-05 0.000896363579466569 0.00131670851828135 0.000373752880896779 1.00593143066714e-05 9.34053795778591e-07 0 0.0001669737206972 0.000187144328038078 0.000142489843209998 4.64915837667775e-05 2.59170399157432e-05 2.05727020470636e-05 0.000206354372310683 3.48757444401695e-05 0.000488888865714348 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1299 84.24 0.210228310502283 NM_000270.3 PNP Homo sapiens purine nucleoside phosphorylase (PNP), mRNA. 1e-167 596 68.86 0.274155251141553 0 coding 0 0 0 0 -0.201740758397766 0.188319654473249 0.343339021013834 0.00482608954268114 GCTGGGTGGGTAACACTCTGTTACTGGAGCCAGCTCAGCTCAGCGGAGCAGATATAAACCGAGAAGGGCAAACTCATCGAGAGGGCGTCTTCGGGACCATGGCGAATGGATATACATATGAAGATTATCAAGACACTGCAAAATGGCTTTTGTCTCATACCGAACAGCGACCTCAAGTGGCAGTGATCTGTGGTTCTGGGTTAGGAGGTCTGGTTAACAAATTGACTCAAGCCCAGACCTTTGACTACAGTGAAATACCAAACTTTCCAGAAAGTACAGGCATGAGCACAGTACCAGAAGTTATAGTCGCAAGACACTGTGGACTTCGAGTCTTTGGCTTCTCACTCATCACAAACAAGGTCATCATGGATTATGAAAGCCAGGGGAAGGCCAATCATGAGGAAGTACTAGAGGCTGGGAAGCAAGCTGCACAGAAATTAGAGCAGTTTGTCTCCCTTCTTATGGCTAGCATTCCAGTGTCAGGGCACACCGGTTAACCAGCCCCGGAGTGGGTTGGCCTCTCCATTATGGGATCTGGGGAGCTGCTGCCTATTTCAGCCCTTGCTGGAGTCACGTGCCTCTGCCTTAGGTGGCGGCAGAAAGGAGGGTCACCTTCCCTGCTTCTTCCACCAGACCTTACTGGTGCTGAGCCCTCTTCTGGTCATTTTGTCATCTCAAAATGATTTCCACTCCTATTCCTCTTCAAGAACTGGAGCCCCAACCCTAGCACACATCCAAGGATTTAGTTTGGGGCCCTCAAACTCAGCACAGGAACTATTACTGGCTTAAGATGATTCTTTCACATTCCTCGGAGCTCAGTTCTGCCTCCTCAGAGCATGGGCGACCATACAGGGAAGAGCCTATTGCTTTTGGATTTTTATGCTATTGTATTTTGAATAAAGACAAAGATGAAGTAATTTCTTCATTTTTATGTGATTTGGGATAAGGTTGGCATATGGACCGAGAGTGACATGAAACCAATCATAAGACCACATTTTGTTCGACTCTGTGCTTCTCAGACAGCGAAGAACTGAGATGAGGTGGTATGTGAATTCAGGGTAGGATGAAGCAAAGGCAAAGAGGTGAAAGTGAAAGGAAGTGCTAGAAGATAAGGAAAGGCTAACTTCGGGCACATAATGGCTACTTCCCTTGGATCAGTCTTCCTCTGCCCCTTTGCTTTCTGGTAGTTTCTGTCTACTCATGAATATCTGAATTAGTTCACTGACCTCAGCTTGTGTTCCATAGTTGCCACTTCCTTGTTATGCCCTAGTTGTATTTCCTATTGATTTCCTTCAGTTCCCTCACCCGAACACCTGCCATAATTCACAGCAGCCATACACTCCTTCACTCCATTCTCACAGTGCAATGACAAATACCCTTTTCTCTGCTGCCCGCCACGCCACTGCTGATGAGAGTGCTGCCAGCCCTTGTGAGGCTGACTCATACCCTGGCCTCTTCTCTTGGAGCAGCCCTTTTCCTCCTATTGCTTTCTTCCTGGGCATTAGCCTTCTCACTCTGCTTGATCAGAACCTCCCTGTGACGTAAGCCCAGGCATGACTCGTTGGCTCACTGAACTCTGTGTGCTTATTAGCTTGCCTTCAGCTGGCTGGCATGTTTGCCATTTGAGAGAGGGTAGAGCTGGGTCAGCCTCCAATAGTGGTAACATTTCAATTAGTAGTAGTATCATATAGAAGAGAAATTTTGGCAGGAAAGCTTTCCAGAACTCTTATAAATAATCCTTTGTTTGGTAACTGACCTACTTAGCTGAACCGAACACAAAAGCATCCCGGAGGGGCAGTATGACTACTCTTCGTTTCATCCATTCTTCTTTTCATCAAGTTATTGAATATTTGTTTAACACCGTTAACTAAGAGAATGTTAAGTTCAGAATATAAAAATGGTTTTTTCCTCTCAAGGGCCTTACAGTGCCCTACAGAAATTTTGTTCAGTCTCCACGTGGTGTCTGACTCTGGAACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCTCCTGGAGTTTGCTCAAACTCATGTCTGTTGAGTCCGTGATGCCATCCAACCAACTCCTTCTCTGCTGCCCCCTTCTTTTGCCTTCCATCTTTCCCAGCATCAGAGTTTTTTCCAGTGAATCTGCTTTTCACATCAGGTGGCCAAAATATTGGAGCTTCTGCTTCAGTATCAGTCCTTCCAATGAATATTCAGGACTGATTTCCTTTGGGATTGACTGGTTTGATCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTTCAGCAACACAATTGAAAAGCATCAATTCTTTGGTGCTCAGTCTTCCTTATGATCCAACTCTCACATCCTTATGTGACTACTGGGAAAACCGTAGCTTTGACTGGATGAACTTTTGTTTGCAAAGTGATGTCTCTGCTTTTTAATACACTGTCTAGGTTTGTCATAGCTTTCCTTCTAGTGAACAAGTGTCTTTTAATTTCATGACTGCAGTCACTGTCTGCAGTGATTTTGGAGCCCAAGAAAGTAAAATCTGTCACTGCTTCCATCTTCCCTCCTTCTATTTCCCTTGAAGTGATAGGACTGGATGCCATGATCTTGGTTTTTTTAATGTTGAGTTTGAAGCCAGCTTCTTCATTCTCCTCTTTCACCCTCATCAAGAGGCTCTTTAGTTCCTCTTCACTTCCTGCCAGTAGAAATACACATTTGCAAAGCTATTACCTGTCCATATAAGGTGGTATAAAATAGGTACAAGTCACATGTTATGGGAGCCTAACGGACAAACTGATTTTATACACTGGATTGTGAGGATTGGTTACTTAGAGAAAGGTTGTTTAACTTTGAGCTTAGTCTTCAAGGTTGAAAGGGAGGAAAAGGATTTCACATGAGGGTGAGCCAAAGTACAGAGTAATGAAAAGCACTAGGCATGTTCATGGGTCATTGTCACAACAGGTGTGACTAGAACAGAAGACATGGAGACGTAGCAGATGGGCATTTGGAGGTTAGAGGAGGGCTGCATTTTGGTGCTGGGCTTTCATAACCCAGATCTGCAGTGTGGTAGGTCAGGAACTAGAATAGTGCCATCTGAAAAATATGTCCCAGAGAGACTTGGAATATTTAAGGGCATTTCTAGAGTTTTTAAAGGGAATCTAGACTTTGTGTGTGTGTGTGTGGCCACTGTGCAGCATGCAGGATCTTAGTTCCCTAACCAGGGGTGGAATCTATGCCTCCTGCAGTGGAAGTGTGGAGTCTTAACCACTGGACCACCAGGGAAGTCCCTCTAGCCTTTTAGATTTAGAAGGTGTTGTGTATTTCATAATAAAATACTAGGCTAATAAGGAAGGTTATGCACTTGATGTCCTAATTCCAAAGTCTAATTACTTAGATCTAAGTACAAAAAGTAGAACTCACCTACTTTATACAAGTATATATTACTGTATTCATGTTAGGACATTAAATATACTTTCACGGTGACAGAAAATTGTGTATTCTTTATAGTACAAACTAAGCTATGACAAGGAAAGTAGGCACAGGCAAGTAATAGTAATAATTACTAATTCTAAATCCCTAGAATTCTAGGTTCAAGGGGATATAGGTTGGAAATAAACATGAACACAAAGTGTCTTCAATTTAAAAAACAAAAACAGCTTTACTGAGATATAATTCACATATGATAAAAATTCATCCATTTAAAGTGTGTAATTCAATGATTTTTAGTATATATGCGGATATGCACAATCAGCCATCATCAGAGTCCATTTTAGAACACTTTCATCACCTCTAAGGGAAATCTGTACCCTTTAGCTATCATTCTGTACCCTGCCCACCCCTTACCCCATGCTACCCTCCTCAGTTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGAACCGTAGCACACCAGGCCTCCCTGTCCATCACCAACGCCGGGAGTCGACCCAAACCCATGTCCATCGAGTCGATGATGCCATTCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCCTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGCTCTTCGCATGACGTGGCCAAAGTATTGGAGTTTCAGCCTCAGCATCAGTCCTTCTAATGAACACCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGATTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTTGGCACTCAGCTTTCTTTATAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTTAATATGCTGTATAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGTGTCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCAGAAAAATAAAGTCAGCCACTGTTTCCACGGTTTTCCCATCTATCTGCCATAAAGTGATGGGATTGGATGCCATGATCTTAGTTTTCTGAATGTTGAGTTTTAAGCCAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTCCTTAGTTCCTCTTCCCTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTTCCCCTTTCTGCCATAAGGGTGGTGTCACTGCATATCTGAGATTATTGATATTTCTTCAGGCAATCTTGATTCTAGCTTGTGCTTCCTCCAGCCTCATGAGGAACTGAGAGAAAGGTTCCTCCAACATTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGACATACTCCTTTCCCTATTTGGAAACCGTCTGTTGTTCTATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGATATTCCCATCTCTTTCAGGATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGCTACCCCTGGCTGCTCAAAAGCCAATAGACAGGGCAGGCTGATAGAAAGGATAATTTGCTTTATTTAAGGTGCTGGTGACTGTGGGGTGAGGGTAGTGGACATCTTTTCAAAGGCCTACTCCCCACCTTCCCAACAAGCGGAGGGTAAGAGCTTTTATAGACAGAGTTGGGAGTGGAGAGGGTTACATGCAGAAACAACATAGTCATCTGTAACAGTCATCTTCATCTGGTCCTCAGTGATCTGACCAACATCATCTTTATTGTCACTAAGATTGGTACAGTTAATCTTTAGTTTTAGGGTCCATTTGTTCCCATTTCTTGGCAGTCAATTCTGTGGTAGCTCATGTCCTGGGTACAGTCTGGTCATCATGTGATTAACTTCTTTACCTGTTGTTTTAGTATCTATAAGACAGCTCACAGGATATGGCTCAGAATATTATATAAAGCCCTTGAGAAAGAAATAAAGGTCCTTGACTATGC EMBV3_27173 CTTAAAGAGGGGAGGAGCTGAGCATGTTAGCCTGAGGACAGGGAGACTAGGAGAATATTT Gene BVT0102_283481 + 0 NULL GK000008.2:41860877-41889792 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13773 CAGAGCTGGAGCTCCGCCGGTGTGGAAACTCACTCGGTCCTTCCCAGTACAGGCTTGCAA Gene BVV0102_235385 + 0 NULL GK000023.2:19966933-20014169 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048812 1 XLOC_028943 NonCoding TCONS_00048812 XLOC_028943 NonCoding NonCoding - 13:49018692-49019337 - TSS35988 645 1 TCONS_00048812_1 97 1 0 1.05470556467492e-05 0 7.41276963642213e-05 0 0 5.77690039552415e-05 0 4.58505571066637e-06 0.000272178487746958 0 8.87282004216321e-07 8.31556057528012e-06 5.93134807224284e-06 3.16030536889996e-05 3.9436128036391e-05 2.04741304973556e-05 1.28699791788864e-05 2.91754561426782e-05 0 0.000111866731292832 1.68651177652844e-05 5.75244607176062e-06 7.11165666945104e-06 0.000356952247466072 0 0.000255784860341289 3.91475823134471e-05 0 1.75618616030724e-05 5.20440340619046e-05 XR_236255.1 LOC101905928 PREDICTED: Bos taurus uncharacterized LOC101905928 (LOC101905928), 6e-08 62.6 72.52 0.178294573643411 0 noncoding 0 0 0 0 0.0425495311291958 0.704658756308425 -0.00959511421808806 0.842321262614134 CCTGGGCGTTTGGGCTCCCTAGCAGAGCCGCAGCGCAGGGGAACCAGCCCATGATCAGTGAGCTCCGGGCAGTTACTTTGGTCCCAGGTTTGGAGCCCAATGCCCGGAACGCGGGAGAGAAGAGGCTGGCTGCCGGCGGGTGCTTGCAAGGCTGTACTGGGAAGGACCGAGTGAGCTTCCACACCGGCGGAGCTCCAGCTCTGCGCCCAGGCGCGATAGCACAGAGCCCCGGCCGAGAGGCTGCTCTGTGCCGAGCGAGCCTCCCCAAGGCCTGCCCAGCTTCTGGCGTTCGCGCCCGGGAAGGAGCAGGCTGCGGGAGTGTGGGAGCCGTGAGTGGTGCCTGACTGCTGCCTCAGCTCAGCTCTCGCCTTCCCTTCGGACCTAGGAGCCAGGCGTCCTTGCAGAGGGCTTAGGGGCTGGGGGTGTGCACACTGCCAAAGCCTCCCTCGGGGAGAGCTCTTTCCGAGGGAAAGGAAGCGCCCCAGGCTGCATTCCCAAGCTGGTGCTTCCCCGCCCAGACTAAGCGCCGCACGGAGGGAATCAGGGTCCCGGTGCCCCTGGCTTGGGGAGGCAGCTCCACAGCCAGAGTGTTGCTCCGTTTGTGCCCAGAAAGCGCCTGCCAGACCGGGCCTTCCCTGGAGCTGT TCONS_00045373 . 5' 339981 TCONS_00045373 . 5' 339981 EMBV3_17374 GCCTGTTGTTCATGATTGGGGAAGTCATCGAGATTCTGGGTGCCCTGCTCTCTGTGCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19474 CCTGCGCCTGGTGGACTGGGTGCCCAAAAGTCACTGATGTGTCCCTTACGTTAGAAAATA Gene GeneID:538717|FNBP1:XM_002691677:452_cdna Constitutive 0 NULL GeneID:538717 11 GENE FNBP1 NULL formin binding protein 1 EMBV3_28099 CTGTTCCGAGCTCCCACAAAGGCGTCCCTAGCCAACACTGAAAACTCTGGTGAAAGTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06229 CAGAACTTTGGAAACCGAAGAACAGACGTGTCAACTGCTCATTTCCCGAGAACCCCTGAC Gene GeneID:513774|AKAP12:XM_002690338:14_cdna Constitutive 0 NULL GeneID:513774 9 GENE AKAP12 NULL A kinase (PRKA) anchor protein 12 EMBV3_20902 CGCGTGCTCTCTCATTTCCTCAGCAGCCAGCTACGGGGACCGCCACTGCATCTCGGTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17511 CACAGTGCCCCACCCAGTATACAAATAAACATTTAGCCCCTTCCCTTCCAACCTCATTGC Gene BVT0102_332955 + 0 NULL GK000030.2:84434236-84500824 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247403 TCONS_00247393 TCONS_00247394 TCONS_00247398 TCONS_00247401 TCONS_00247399 TCONS_00247395 TCONS_00247400 TCONS_00247402 TCONS_00247397 TCONS_00247405 TCONS_00247396 TCONS_00247404 1 XLOC_151320 Coding TCONS_00247394 XLOC_151320 Coding Coding TAF1 X:84498002-84562172 j TSS185286 7287 1 TCONS_00247394_9 1468 0.14985590778098 32 0.886939176237747 8.07528729991801e-05 4.06258931300246e-28 0.000117069073853205 1.93824231466201e-05 1.0612531158377e-05 4.61593874927341e-21 8.0539161773315e-05 4.84318939382662e-05 0.000501095107318784 0.000208454089523055 1.31593120143322e-08 4.60499932830621e-05 2.83204961777133e-23 1.88618484455716e-43 2.80202395435566e-08 0.00069861685054412 3.69560317531493e-65 0.00138077424278488 4.42763684849822e-05 0.000556408698285749 9.01352545206437e-49 0.000775800734363267 0.000509005973902036 0.000663667305752394 0.000175113429620823 0.000206703430845214 4.53471599898172e-08 5.5153093913705e-06 0.000136164357874217 4.43439675432684e-08 XM_005200742.1 LOC101909859 PREDICTED: Bos taurus transcription initiation factor TFIID subunit 1-like (LOC101909859), transcript variant X4, mRNA. 0.0 1.107e+04 100.00 0.842321943186496 NM_004606.3 TAF1 Homo sapiens TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa (TAF1), transcript variant 1, mRNA. 0.0 7326 93.58 0.664333745025388 TCONS_00247394_9 sp|P21675|TAF1_HUMAN TAF1_HUMAN Transcription initiation factor TFIID subunit 1; 0.0 2858 99.12 0.999318801089918 3 coding 0 0 0 0 -0.189354909144841 0.447318678485494 0.0574083650467099 0.287471078713425 ATACAGGATACCTGAGGAAAGCAGTGGCACCGATCTTCTGGCTGATGAAAACTTCCTGATGGTGACACAGCTGCATTGGGAAGATGATATCATCTGGGATGGGGAGGATGTTAAACACAAAGGGACAAAACCACAGCGTGCTAGCCTGGCAGGCTGGCTTCCTTCCAGCATGACTAGGAATGCCATGGCTTACAATGTTCAACAAGGTTTTGCAGCAACGCTGGATGATGACAAGCCTTGGTACTCCATTTTTCCCATTGACAATGAGGAGCTGGTATATGGACGTTGGGAGGACAATATCATTTGGGATGCTCAGGCCATGCCCCGGTTCTTGGAGCCTCCTATTTTGACACTTGATCCCAATGATGAGAACCTCATTTTGGAAATTCCAGATGAGAAGGAAGAGGCTACTTCTAACTCTCCCTCCAAGGAGAGTAAGAAGGAATCATCTCTGAAGAAGAGTCGAATTCTGTTAGGGAAAACAGGAGTCATCAAGGAGGAACCACAGCAGAACATGTCTCAACCAGAAGTGAAAGATCCATGGAATCTCTCCAATGATGAATATTACTACCCTAAGCAACAGGGTCTTCGAGGCACCTTTGGAGGAAATATTATTCAGCATTCAATTCCTGCTGTGGAATTACGGCAGCCCTTCTTTCCTACCCACATGGGGCCCATCAAACTCCGGCAGTTCCATCGCCCACCTCTGAAGAAGTACTCTTTTGGGGCACTATCTCAGCCAGGTCCCCACTCAGTCCAGCCCTTGCTAAAGCACATCAAAAAGAAGGCAAAGATGAGAGAACAAGAGAGGCAAGCTTCAGGTGGTGGAGAGATGTTTTTCATGCGCACACCTCAGGACCTCACAGGCAAAGATGGAGATCTTATTCTTGCAGAATATAGTGAGGAAAACGGACCATTAATGATGCAAGTTGGCATGGCAACCAAGATAAAAAACTACTATAAGCGGAAACCCGGAAAAGATCCTGGAGCCCCAGATTGTAAATATGGAGAAACTGTTTACTGCCATACATCTCCTTTTCTAGGCTCACTCCATCCTGGACAATTGCTGCAGGCATTTGAGAACAACCTTTTTCGTGCTCCAATTTATCTTCATAAGATGCCAGAAACTGACTTCCTTATTATTCGCACAAGACAAGGTTACTATATTCGGGAATTAGTGGATATTTTTGTGGTTGGCCAGCAGTGCCCTTTGTTTGAAGTTCCTGGGCCCAACTCCAAAAGGGCCAATACTCATATTCGAGACTTTCTCCAGGTTTTTATTTATCGCCTGTTCTGGAAGAGTAAAGATCGCCCACGACGGATCCGAATGGAAGATATAAAAAAAGCCTTTCCTTCTCACTCAGAAAGCAGCATTCGGAAGAGGCTAAAGCTCTGCGCTGACTTCAAACGCACAGGCATGGATTCAAACTGGTGGGTTCTGAAGTCTGATTTTCGTTTACCAACTGAAGAGGAGATCAGGGCTATGGTGTCTCCAGAGCAATGCTGTGCTTATTACAGCATGATAGCTGCAGAGCAGCGACTGAAGGATGCTGGCTATGGTGAGAAGTCCTTTTTTGCTCCAGAAGAGGAAAATGAGGAAGATTTCCAGATGAAGATTGATGATGAGGTTCGCACTGCTCCTTGGAACACCACACGGGCTTTCATTGCTGCCATGAAGGGCAAGTGTCTCCTGGAGGTGACTGGGGTGGCAGATCCCACAGGGTGTGGTGAAGGATTCTCCTATGTGAAGATTCCAAACAAACCAACACAGCAGAAGGATGATAAGGAGCCTCAGCCAGTGAAGAAGACAGTGACAGGAACAGACGCAGACCTCCGTCGCCTTTCACTGAAAAATGCCAAGCAACTTCTCCGTAAATTTGGTGTGCCTGAGGAAGAGATTAAGAAGTTGTCCCGCTGGGAAGTGATCGATGTAGTACGCACAATGTCAACAGAACAAGCCCGCTCTGGAGAGGGACCCATGAGTAAATTTGCCCGTGGATCAAGGTTTTCTGTGGCTGAGCATCAAGAGCGTTACAAAGAGGAATGTCAGCGCATCTTTGACCTGCAGAACAAGGTTTTATCATCAACTGAAATCTTATCAACTGACACAGACAGCAGCTCAGCTGAAGACAGTGACTTTGAGGAAATGGGAAAAAACATAGAGAACATGTTGCAGAATAAGAAAACCAGCTCTCAGCTGTCACGTGAACGGGAGGAGCAGGAACGGAAGGAACTACAGAGGATGATACTGGCAGCAGGCTCAGCAGCATCAGGAAACAATCACAGAGATGATGACACTGCTTCTGTGACAAGCCTTAATTCTTCTGCCACTGGCCGTTGTCTCAAGATTTATCGCACGTTTCGAGATGAGGAGGGGAAAGAATATGTTCGCTGTGAGACGGTCCGAAAGCCAGCTGTCATTGATGCCTATGTACGCATACGGACCACAAAAGACGAGGAATTCATTCGAAAATTTGCCCTTTTTGATGAACAACATCGAGAAGAGATGCGAAAAGAACGGCGGAGGATTCAAGAGCAACTGAGACGACTTAAGCGAAACCAGGAAAAGGAGAAGCTTAAGGGTCCTCCTGAGAAGAAGCCCAAAAAAATGAAGGAGCGTCCTGACCTAAAACTGAAATGTGGGGCTTGTGGTGCCATTGGGCACATGAGAACAAACAAATTCTGCCCTCTTTATTATCAAACAAATGCTCCCCCTTCCAACCCTGTTGCCATGACAGAGGAGCAGGAGGAGGAGTTGGAAAAGACAGTCATTCATAATGATAATGAGGAACTTATCAAGGTTGAAGGGACCAAGATTGTCCTAGGGAAACAGCTAATTGAGAGTGCAGATGAGGTTCGCAGAAAATCTCTGGTTCTCAAATTCCCTAAGCAGCAACTTCCTCCCAAGAAGAAACGGCGAGTTGGAACTACTGTTCACTGTGACTATCTGAATAGACCTCATAAGTCCATTCACCGGCGCCGGACAGACCCCATGGTGACATTGTCATCCATTTTGGAGTCTATCATCAATGACATGAGAGATCTTCCGAATACATACCCTTTCCACACTCCAGTCAATGCAAAGGTCGTAAAGGACTACTACAAGATCATCACCCGGCCAATGGACTTACAGACACTCCGTGAAAATGTGCGTAAACGCCTCTACCCATCTCGGGAAGAGTTCAGGGAGCATTTGGAGCTAATTGTGAAAAATAGTGCAACCTACAATGGGCCAAAGCACTCACTGACCCAGATCTCTCAATCAATGCTGGATCTCTGTGATGAAAAACTTAAAGAGAAAGAAGATAAATTGGCTCGTTTAGAGAAAGCAATCAACCCCTTGCTGGATGATGATGACCAAGTGGCATTTTCTTTTATTCTGGACAACATTGTCACCCAGAAAATGATGGCAGTTCCAGATTCTTGGCCGTTTCATCACCCAGTTAATAAGAAGTTTGTTCCAGATTATTACAAAGTAATTGTCAGTCCAATGGATTTAGAGACCATACGTAAAAATATCTCCAAGCACAAGTATCAGAGTCGGGAGAGCTTTCTAGACGATGTCAACCTTATTCTGGCCAACAGTGTTAAATACAATGGGCCTGAAAGTCAGTATACTAAGACTGCTCAGGAGATTGTGAACGTCTGTTACCAGACACTGACTGAATATGATGAGCATTTAACTCAACTTGAGAAGGATATTTGTACAGCTAAAGAAGCAGCTTTGGAGGAAGCAGAATTAGAAAGCTTGGACCCAATGACCCCAGGGCCTTACACACCTCAGCCTCCTGATTTGTATGATACCAACACATCCCTCAGTATGTCTCGAGATGCTTCTGTATTTCAAGATGAGAGCAATATGTCTGTCCTGGATATTCCCACTGCCACTCCAGAAAAGCAGGTGACACAGGAAGGTGAAGATGCAGATGGTGATCTTGCAGATGAAGAGGAAGGAACTGTGCAACAGCCTCAAGCCAGTGTCCTGTATGAGGATTTGCTTATGTCTGAAGGAGAAGATGATGAGGAAGATGCTGGGAGTGATGAAGAAGGAGATAATCCTTTCTCTGCTATCCAGCTGAGTGAAAGTGGAAGTGACTCGGATGTAGGATCTGGTGGGATAAGACCCAAACAGCCCCGCATGCTTCAAGAAAACACAAGGATGGGCATGGAAAATGAAGAAAGCATGATGTCCTATGAGGGAGACGGTGGGGAGGCTTCTCATGGTTTGGAGGATAGCAATATCAGTTATGGGAGCTATGAGGAGCCTGATCCCAAGTCGAACACCCAAGACACAAGCTTCAGCAGCATCGGTGGGTATGAGGTATCAGAGGAGGAAGAAGATGAGGAGGAAGAGCAACGCTCTGGGCCGAGCGTACTAAGCCAGGTCCAGCTGTCAGAGGACGAGGAGGACAGTGAGGATTTCCACTCCATTGCTGGGGACAGTGACTTGGACTCTGATGAATGAGGCTTCCTTTCGGCCTCCTTGGTCCGCCTTCCCTGTTCTCCAGCCTAGGTGGCTCACCTTTCCCCCATTTGTTTATATTTATTTGTTATAGTGTCTGATCCTGAAAATACCAAATTAATTAATACTGTAGCTTTTTAAAAAATAATAAGTAAGTGATAATAAATTAACTCTTCTGATTTTTCTGGGGCAGTGCCACCCTTTGATTTAAAACCAGGCAACCCCCTTTCCCCACCACTAACAAAAAGAGAGCACTCTCCTCCTTCTGCAGTACTCTCCTTAACTCTATTAATTGCTTTTGGTATCATTTTGTTCCTGGGGAAGGAAGAGAAATTATGAAATAGCTAATAACTTTATGTCCTCTTGATGTATTAGAAAATTTCCAAGCATGATATCACCTCAGTTTTCTAATTTGCAGGCTGTAACCATTGACAGCCCCCTGTTGGGACAGAGAATTGCGTTCTGGTGGACTCTGTGCCACACTAAAACCATAAACCTAATGGACAAACTGAACTGCCCATTATTTATTATTTATTTGATTATACAATGCCTTGTTCCTAAGTGGATTGGAGGCAAATAAATTATAAATCTTTGAAACAGCATATTTGTCAGAAATGATATGTCGCCATGTAAATGTGTTCTGTCCTTCCCCCACCCCCAGGGGAAATGGTAGGGAAATGGTAAGTTCTTTAGGGCAAAGACTGTGTCTTCTGTTTCTTTTCATGCTTAGGATATGGTTCTGTGCAGAATAGGTACTCAGTAAATGTTCCTAGAATCATAAAATCCTCAACAGATTTGTTATTAAGCATCTGCTCCATGATAAGCGTTCTATCAGCTCCTTGGGATGCAAAATTAAATAAGACACATTCCTTTTATTGAAAGATCTCACCATTAAGTTGGGGGAGGGGGAGGGAAATTCAAAACATGTTAATAAATCATTACAGTACTGTAAGATAAGTGCAATTAAGCTAGGTATAAAACATAGGAGAAAATAGAGGAGCAGTCATGTCTGAAAAAGTCAGGGAAGTCTTCTTAGACATACTTTTTAAGCTGACTGTTGAAGAATTAGTAGGAGCTTGCCAGATGGAAAAGTCTAGGCAGAGTGTCACATGAAATGCAAAGGCCAAACTCCAGAAATGGCAAATAGCAGAGTGTGTTCCTTGTTTGTTTGTTTGTTTGTTTGTACCTGCCTTGTTCCAGAAAGGATTTAAGGTGGTTTATGTTCCAGTCCCTCCATGCTGGAATGGCTCTAGGTGAGACTGAAAGATGGACAGGAAGCATATCATCAAGAGCTTTGAATTGATGCTAATGAATGTGAATTTTATATTAATTAGAAATGAAATGTGCTAGTGGAGTGATAAAATATGATTTGTGTTTTAGAAATTCTCAGTATATTGAATGAAGAAATAAATTGAAGAGTCATGTGTAACAAGTGTGATCCCATTTTTGTAAATGATAAAACCACATGTATATATTTATATGTGTTTACATATACTTGTATATGCAAAGGAAAAAGTCTGAAAGGATTTACACAAAATGATTGACAGTGATAACCTCTAGGCAATGAGATTGGAAGGGAAGGGGCTAAATGTTTATTTGTATACTGGGTGGGGCACTGTGCTTTTATTTCTGTATTTGAATTTTTATAAGAACATATTATTTTTGTAATAAAAATTTTAAAAAAAATTCCAGTGGTAGTGTGGAGAATGGTTTGGAGGGTGGCAAATATAGTTGAACTAGGACTGTGGCATTAGGATAGGGAGGAAGGGGGTGAATTTGAGAGAGATTTAGGGGACAGATCAACAGGACTTGGTGACCAGTTGGCATTTGGGAGTGGAGAAGGAAAAATGGAAGATGACTTCCAGAATTTTGGTTTAGGAGATTGGATGGGTACATGGTATTCATTCATTCAGCATTTATTGAGCCACCAGGCTTCCCAGGTGGCGCTAGTGATAAAGAGCCTGCCTGTCAATGCAGGAGACATAAGAAACCCACAGGTTTGGTCCCTGGATCAGGAAGATCCCCAGGAGGAGGACATGGCAATCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCTTGGCAGGCTACAGTCCATGGGGTTGCAAAGAGTCTGGCACAACTGAGCCACTGAGCACACACGAAGGTCACAGAGAGCTCTGTAGGCAAAAGAATCTGGACTTAATCCTAAAGGCAGTAAGAATCTATTGAAGGATTTGGATAATTTTAGCAGCAGTTTGGGCTATGGACTATAGAATAGGACTGGATATGGTTGTGAGTCATTTAAGCAAAGTACGAGTAAGTTGTTCTTATGCAAGAACAGGCAAAGATTTGAGAGAATTGAGGGGAGGTAAAATCTACAGGTGATTAAATGTGAGGGATATTTCAGTTAATTAGTGAAGAAACATTGATTGAGCCTAGTGAGTACCAGGCATTATTGTTGGTGCTCTGAATATAGCAGTGAATAAAACATACCCCCTTCCCTCATAGAGTTCAGGATCTAGTGGGAGAGGAAGACAGATAAGTGAATGAGAGTGAGAGAAGTACTCTGAAGACAAAGTGATATGAGAGGGTTTGGGGTGAGGGTTCTAATTTAATGGTCAAGGAAGACCTTGCTGAGTAGCTGTCATTGGTGTGTAAATAAGCATGTGTTGCTGTGATAAAATATTTTTTAAAAGTCTGAAAAAGGAAGCAATGAAAGAACCAAGAAAGTTACTTTGAAAGACTGGCCAGAAGTATGAGGAAACCAGGATACACTGTTTTTGTTGTTGTTCAGTTGCTAAAGTGTGTCCAGCTCTTTGTGACCTAATGGACTG EMBV3_33447 CTGGAGTGCTGCGGTTCAAGAGGTCGCAAAGAGTTGGGCACGACTGAGTGACTAAAATGA Gene GeneID:508273|RANBP6:NM_001037817:46_cdna UTR3_Alt 2 NULL GeneID:508273 12 GENE RANBP6 MGC128472 RAN binding protein 6 EMBV3_24636 TCACTTCCCTTTGGAGACACAACAGAAAGACGCGATTGAGTGCCACAGGATTCAGAGATC Gene GeneID:664637|BOTA-T2R10B:NM_001046627:3_cdna Constitutive 0 NULL GeneID:664637 5 GENE BOTA-T2R10B NULL bitter taste receptor T2R10B EMBV3_06914 TGCAGGGCTCTGATATTTTATGGTCCTGTGAAAGATGCTGAGGAATGTCTTTCAGCCAGG Gene GeneID:532923|GOLGB1:XM_002684791:139_cdna Constitutive 3 NULL GeneID:532923 1 GENE GOLGB1 NULL golgin B1, golgi integral membrane protein EMBV3_24241 AAATGCAAGTATTCCTGAGAGACATCACACATCCAGGGCCTAGCACCATGTCTCCCCTCA Gene BVV0102_244321 - 0 NULL GK000007.2:50543439-50666009 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217003 TCONS_00217002 1 XLOC_131403 Coding TCONS_00217003 XLOC_131403 Coding Coding KLHL3 7:50662652-50788208 = TSS161714 5558 1 TCONS_00217003_5 587 0.0147535084562792 15 0.955852017044323 0.000332895746345372 1.62529797480532e-05 0.000327986251658961 9.56152993192089e-05 0.000543631070762518 3.15292302234924e-05 1.87623744877455e-05 7.60784112206045e-05 0.000251259422697188 0.000202081861167651 3.08193718909789e-10 1.0171232580658e-06 5.10990028087971e-07 2.53820504865995e-05 0.000132849861375554 0.00347305672602959 0.00022400348757792 0.000460440798749301 0.000339309757309782 0.000353218620743277 0.000493204644277219 0.000150433115347159 0.000140285102703151 0.000392793000100894 0.000453741745656937 7.47769781843133e-05 0.000105407652023833 0.000185181945343277 6.63730412834774e-05 0.000594141413130635 XM_612749.6 KLHL3 PREDICTED: Bos taurus kelch-like family member 3 (KLHL3), 0.0 4286 100.00 0.4273119827276 NM_017415.2 KLHL3 Homo sapiens kelch-like family member 3 (KLHL3), transcript variant 0.0 5003 80.67 0.968873695573947 TCONS_00217003_5 sp|F1MBP6|KLHL3_BOVIN KLHL3_BOVIN Kelch-like protein 3; 0.0 1224 100.00 0.998296422487223 8 coding 0 0 0 0 0.0495437488624352 0.672672428188554 -0.0281237253451384 0.764035713264342 TCTTTTCAGTCTAGGCAGAGGAGGCAGGAGGTACTGGGGTCGGCTGGTCGCCTGGGGATGCCTGGGCAGATGTGGAAGCGGCTGGAAAGGTGGCCTTGCACTTGGGTTGCTGTTGCTGCGCTGTTCCTAGGAGACGGAGGAGCAGCAAGCCTGCGGGGGAGGGGGAGCAAGTGGGTTGCTGCTTTTAGCAGCTGAAAGGGCTGCAGGGAGCTCTGGGTAAGACGTTTTCTGCTGCTGCTGATTCTGCGGTAGAAGCTGCCGAGAGTAAGTCAGAGGAAGGAGGATCGAGAGGGAGGTGGCTTCATTTGCAGCCATGCTGAATCACTGCTGCTGATCAGATCTCCTGCTGGTTGGCTGGGAGAACCGAGCAGAACAGAGCTAGGATCCTCCGGTACAGGCACAGCTCAGCAGCTGCCACCCCGGCTGGGCCTCACACAATGGACGGGGAAAGCATCAAACCGAGCTCCCAGCCTCTGATACAGACTGGGGATGATGAAAAGAACCAGAGGACCATCACTGTCAACCCTGCCCACATGGGGAAGGCGTTCAAGGTTATGAATGAACTGCGGAGCAAACAGCTACTGTGTGACGTGATGATTGTGGCAGAAGATGTCGAGATAGAAGCCCACCGTGTGGTCCTGGCAGCCTGCAGCCCCTACTTCTGTGCGATGTTCACAGGTGACATGTCTGAGAGTAAAGCCAAGAAGATAGAAATCAAGGATGTGGATGGGCAGACCCTGAGTAAGCTGATTGACTATATCTATACGGCTGAGATTGAGGTGACTGAAGAGAACGTCCAGGTGCTGCTCCCAGCCGCCAGCTTGCTACAGCTCATGGATGTTCGTCAGAACTGCTGTGACTTCCTGCAGTCTCAGTTGCATCCCACCAATTGCCTGGGCATCCGCGCTTTTGCAGACGTGCATACCTGCACTGACCTGCTGCAGCAGGCCAATGCTTACGCAGAGCAGCACTTTCCAGAGGTGATGCTAGGGGAAGAATTTCTTAGCCTAAGTCTGGACCAGGTGTGCAGCTTGATATCCAGTGACAAGCTGACCGTTTCTTCAGAAGAGAAGGTATTTGAAGCTGTGATTTCATGGATCAATTATGAGAAAGAGACCCGTTTAGAGCACATGGCAAAACTGATGGAACATGTCCGTCTCCCTCTCTTGCCGAGGGATTACCTCGTCCAGACAGTTGAAGAAGAAGCTTTGATAAAGAATAACAACACCTGTAAAGACTTCCTCATCGAGGCCATGAAATACCATCTGCTCCCTCTGGATCAGAGGCTCTTGATTAAAAACCCAAGGACCAAGCCCAGGACTCCAGTCAGCCTGCCCAAGGTCATGATCGTGGTTGGTGGCCAGGCACCCAAGGCCATCCGCAGTGTGGAGTGCTATGACTTCGAGGAGGATCGCTGGGACCAGATCGCTGAGCTTCCCTCCAGGAGATGCAGAGCAGGTGTGGTGTTCATGGCTGGCCATGTGTATGCTGTGGGCGGGTTCAATGGCTCACTGCGTGTGCGGACAGTGGACGTGTATGATGGGGTGAAGGACCAGTGGACGTCCATCGCCAGCATGCAGGAGCGCCGGAGCACGCTGGGTGCAGCTGTGCTCAATGACCTGCTCTATGCCGTGGGGGGCTTTGATGGCAGTACTGGCCTGGCGTCGGTAGAAGCCTACAGCTACAAGACCAACGAGTGGTTCTTCGTAGCCCCGATGAACACGCGCCGGAGCAGTGTGGGCGTGGGCGTCGTAGAAGGGAAGCTGTATGCTGTTGGGGGCTATGATGGGGCCTCTCGCCAGTGCCTAAGCACCGTGGAGCAGTACAACCCAGCGACCAATGAGTGGACATATGTGGCAGACATGAGCACTCGCCGCAGTGGCGCAGGGGTTGGGGTCCTCAGTGGGCAGCTGTACGCCACAGGTGGGCACGATGGGCCCTTGGTGAGGAAGAGTGTCGAGGTTTACGATCCTGGAACAAATACCTGGAAGCAGGTGGCAGACATGAACATGTGCCGACGCAATGCAGGGGTCTGTGCAGTGAATGGGCTCCTGTATGTGGTTGGCGGGGATGATGGATCCTGTAACTTGGCTTCGGTGGAGTACTACAATCCTGTCACTGACAAGTGGACACTGCTGCCAACCAACATGAGCACAGGGCGGAGCTATGCAGGTGTTGCTGTGATTCACAAGCCCTTGTGACCCCAACTCCCACTGCCAGGAGGTGGAGGAAGGGAGGGGTGCTGCCTGTGACTCAGCACAGCAGGACCACGCTGGTTGGATGCCACTCGCTGCCGGAGTCTGCAGTGGGGTGGGAACTGCCCTCCTCCAACTTGGCAGTATTGTCTGGGTGGGAAGACAGTGGTTGACTCCTGGCTTCCATGAGGTGTTTTGTCTCCTGCCTTGAGCAGTGGGTTCCTGATAGTTCTGGCTGCACCTTTGAGCATTGTGTGTGTGTGTGTGTGTTTCTATAGGGGTATTAGAGAAGCTGGAACTTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGTGTGTGTGTGTATGTGCGTGTGCAGAACGTTTTGCTTCACTAAGTTGGGGGATGATGACGGTCTACTCCATTTCTGTACTACTGATCCTTCTGCTATGCTAAAAAACAAGTCACAGAAGCCTCTCTTCTGGATTGGCCCCTGGGGACCTTGGGACTACGAAAGCTGCTGTCTACTGGAAGTGCAGTTGGACACACCAGGAATGTCCAGAAATGACCAGGCCCACGTGCTGGCCTAGACCACTGGCACTGTCTGCAGAAGAGTGGGGCTGTCCTGAAGCTGCCCCGTGTCCTCTGTGCGCTAGAACTAGGACCGTGGGTTCTCCAGCCCCTTGGCTGGGTGCTCTTCCTTCACCTCTTCTCCCAGAAGTTCTCATCAGAACTGCCTGGTCTCCAGGCCCCTGGTCTTTGATGTAATGGATTCCAAGTTTGGGAGATTTTGTGTCTCTTCAGCTGAGAAAACTAGCTCTTCAGTGAAGCACTGAAAAACACACTGGAGAAAAAAATACATGGGAAATAAAAGCAACAAAACCAAGTGGTAGGGCTTTGGTCCTTGCCCATAGCAGTCTCAGAGAAGACCCTGCTTCTGGGTTTTCCTGGGATAGGACGCCTCTGTTTATACTTATTATCCAGGTTTAATTATTCAGAGCATCCCATTTTACTCTCATAAGTGTTCTGGTTTGGTGGTGAAGTAAAAGGTCACCCTACCTCCAAACCTAAAGATAGGTTTTTCCTTGCACTGGATGGACTCGTGTGATTCAAATGGACACGGATGACTTTAAAGGGGTGTACCGGCTGGCCCTGGCCATCAGCAGTCTGTGATGAAGGTCCTAGTCTGTCTGACACCCTTGTCCTCTCCCCCATTCCAGGCCTATACCGTCTCTCCAGCCCTCAGAAATCCCACTCCTTGCTTCCGTGAGGGGAGACATGGTGCTAGGCCCTGGATGTGTGATGTCTCTCAGGAATACTTGCATTTTGAGAGAGGAGCTTGATGAAAGGTTTGCTAATTCACAGGTAAAATGATTAATGACAGAACTTCAGGCATCTGGAGAGGGGTATTTGAGGGTGCACAGACTCACTTGCATTTAAAAAAAAAGAAGAAGAAAATTAAAGCTGTACTGTTCCTGAACTAGCAAGTTGTTTATATTGGAATTTCCAGCATAAGGAGGGGAGATCTTATGTCTGGAGCAGCCTCACAACTTGGGGACTGGGATTTACCCTCCCTGTTGTCAGGGTCCACCCTTAGGGAGCCAAGGAGCTTTATGAACCCTGACATTGGACTTCTGATACAACTGGGCCCCTTCCAAACAGATTTTGCAGGAGGCTGGCATTCTTCCCACTTCACCCCAAGTTAGAAACCCAGGACTCTCCCCAGCGAGTTGGCCACTCTGTGTATTTACTGTATATTTATTGTGCACGAACCACTCAACTCTCTTGAGGGGGAAACATCTTCCGATGTTGAGCAGATATTATATCAGTGAGATGTTTGGAGAACACCAAGGCACCCAGGGTCTTTAGCAGCCTTGGGAAGGGGCTGAAATATCCAGCTTTGATGGACCTGGAAGAACAGTTCCGAAGATCCAAAGAGATCAAGACATGCTGTTAGCTGGGCTTTCCGCCCTTAACTGGCATGGAGGTGGCTGTGGTTTCAGAGCCCTGCCTGACTCTGGATCAGAAGCTGAAGGAATGTGCTTTCTGTTCCAAATGTTGTTCTCCTCCCTCTCTGAGGAAGGTTTGGGACTTTGTTTCAGGGTGCGTGTGTGAGTGTGTGTGTGTGTGCACGTGTATTGGTGATAAGGTTGGGGGTTGGGGTCTGATGCGTGCCGTCACACAGCTCCTGATTTCAGATGAAACGTGAAGTACCCCCCAACACTTAGAAGCTGAACTTCCATGCTTATCATGCTTGTGTAGGGGAGGCTCCTGTTCATGGTCATCTTCCCAGAGAGGGTCCCCTCCATGAGAGCTAGCCAGCGTGTTTTCTGCTTTTGGATTTTTGCTGTTGGCCCCTTCTTACGTCTCCCTGCCCAGGAAGTGCTGCCCCTGTTGGCAGTGTTCTGAGGCTGTGTTCATCTCACCTCCATGCGTCCTTTCTCATGGGGACTAGAACACTGGTACGTCATCACCAAAAAGCCAATGTGCTGTATCTGCCCGCAGATGCCGTCCAAAACTAGCTCTCCCTTTACCACCATATGATTTTCTCCCTACAGTGGGCACAACAGACTTATTTTCAAGTCTGTGCTGGTCATGTGGCAGGTGAGCCCCCCATACCCCTATTCTGACAGCCACAACTGCTTGTGAATGCAGCTTTGCCAGTGGTGTATCTGAAGTCTGATCACAGTGATGAAATGGAATTGCAGCCCAAGGTTAGAAGCAGCTTAGACTCTACTTGGATACTGATTTGGACAACAGAGAAGTCAGACTGAATTCCAAAGTTATTTCTCTTAAGTACCCAATGGCATCTCTCCATCTAAAAAGTTGCAGTATTATGCAAATGAAAGTGACCTCATTTTCTGCTATGCAATAAGAATACTTAATTCTTTTTGTGACAAACCAGTTGCAATATCCCCTAAGATGCTTTCTGAGCTGTCTTACTTTGATATCTGTTGTGTAATGTTTGTATCTTCCTGAGCCAGATGCTTTCAAAGATTGCCTTTTTATAAAACTGAAGCTATAGCTTTCAGGCTAAAATTTTAATGTAGATATTTTTATAAAATAATTTTTCACAATATTTGAATTGCTTCTTATTATCCATGATAATGAAATGTTACGTTCTATTGTGCCATTCACTCGAACATCATCCATGCCTGTAGGTATTTTCCCTTTGTTTCTCACCTTACCCAAACTGATTTTTCAGTAGCTTCAGGCTGACTTGGAGGCTTCTTTCTTACAACACATGCAAGGGAGATTGCTAAAAAACACATAAATCACTGGTGTTTTTTTAGTTGTTCAGGGTTTAACAGTAAGCCTAATGCAGCACTTACCCATCTATGATGCCTGTCTGCTTTTTCTGGAGACAGGCTTTCGGCAGGAGTGAGG EMBV3_32262 AATGACCGCATCATTGACTTCGTGGATTTGTTCACTTTAACGCCCCCCTTCCTGAACTTC Gene BVT0102_090938 - 1 EMBV3_09147 GK000030.2:25445677-26730297 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249897 1 XLOC_152840 NonCoding TCONS_00249897 XLOC_152840 NonCoding NonCoding - X:26646915-26647543 - TSS187118 628 0.205414012738854 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000159814643068049 0 0 0 0 1.46083649621144e-05 0 0 0 0 0 0.000170065942422195 0 NM_182616.3 C15orf38 Homo sapiens chromosome 15 open reading frame 38 (C15orf38), 2e-06 57.2 83.33 0.0843949044585987 0 noncoding 0 0 0 0 -0.130732558577395 0.316356656394711 0.0200128152267161 0.741487909006481 GGTGAGGACACTAATGACCAGAGAAGCCAAATAACTTGCCCAGAGTTACCCAGCTAGTGAACAGCAGGTCCAGGATTCAAACCCAGGCAGACTGACGCTGAAGTAAGTGACCTGAACTCTTCTGTTCTACATTCTCTATGAAGGTTTTTGTGTGTCACATCGAGGAGTACGCACTGCAACCTGAAGTTCAGGAAGGGGGGCGTTAAAGTGAACAAATCCACGAAGTCAATGATGCGGTCATTTTTGTCTACAGAAGAGTAAGCCAAGTCAAGCAAATGGTTATTTTTAAGTGAATTGATAATTTGCATGAACTGAATCAAAATGGTCAAGTTGCTTGAGGAAACAGGCAGCTGCCCCTGGAAGCTGTGTACATTGCAAATTTTGCTGATCCACTCCCCTAATCCTTGAGAAAGTGTCCTTAAGGAACCCCAATTGTTTTAGATAAAGAACATTTGTCTGCTGCTTCCATGTATTTAGACCAGTATATATTTTTACACTTTTTCACAATGTATAATTCGAGTCTGAATAAGAAGTAGAAGAGTATGAATACCAATCTTTTTCATGACTGTAACAATACCTTGCCTATTCCGAAAAATACCTCCCAAGAGACCTGGCTTATACTTAACTC TCONS_00246617 TCONS_00246618 . 3' 81820 TCONS_00246617 TCONS_00246618 . 3' 82447 EMBV3_26386 ATAGCACACTGAACCTTCAGATTCATGCAGGTGTGGGAATATTCAGCTTTGCCAGGTACG Variant GeneID:515126|AMZ2:NM_001034481:19_cdna 482^610 2 EMBV3_07749 GeneID:515126 19 GENE AMZ2 MGC127801 archaelysin family metallopeptidase 2 EMBV3_09598 TAACGTTAGCTACAAGGAAAAAGGACGCCTTCCACGACAGACCCTTGAGGTTTCTGCGTC Gene GeneID:515893|YIPF2:NM_001101094:44_cdna Constitutive 0 NULL GeneID:515893 7 GENE YIPF2 NULL Yip1 domain family, member 2 EMBV3_43324 TGGTCTTTGGCCTGGAGATGAAGGAAGTCGACGGTAGAGGGAACATCTACACCCTGATCA Gene GeneID:782703|LOC782703:XM_002700330:55_cdna Constitutive 0 NULL GeneID:782703 X GENE LOC782703 NULL similar to melanoma antigen family B, 4 EMBV3_38966 GAGGCCTACAAGCGGGGAAGGTCATTAAAGCCAGTGAACATCATGGAGCTCTACCACAGT Variant GeneID:518514|IL1F5:NM_001075775:92_cdna 175^302 1 EMBV3_24971 GeneID:518514 11 GENE IL1F5 NULL interleukin 1 family, member 5 (delta) EMBV3_37545 TACGTACCTGACCCCCCTTGGTCTCATAGAAACCCCCAGCGAAACCACCCAAGCTTGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31479 CTCAGCCCCAGACAGGCTATTTTTGGCCCGTTGCAAAGTATGATCAGGAACTGTGGCAAT Gene BVT0102_177285 - 1 EMBV3_17181 GK000024.2:1304490-2206520 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38622 AGCATCAACTCCTGTCCAGCAGCCTGACACAGCAGAGCCATCCAAGCACAAAGTTCTTTA Gene GeneID:100336568|LOC100336568:XM_002690128:163_cdna Constitutive 0 NULL GeneID:100336568 9 GENE LOC100336568 NULL laminin alpha 5-like EMBV3_34790 GCCAGGCCAGGAGGGTGGAGTGCTGGTCCTGGAGTGACAGACCTTGGCCCAGCTCCCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37526 CCCTCGACCGGTTCTTCTAGCCGTGGTGTGCCGACATTAACCTAGATGAGCTGTTGGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28541 ATACACTGGAGAACAAAGGGAACTCGCGGTTTTTCCACATCCCGTGTCATCTATGGCCGC Gene GeneID:532072|AKAP1:XM_002695587:126_cdna Constitutive 0 NULL GeneID:532072 19 GENE AKAP1 NULL A kinase (PRKA) anchor protein 1 EMBV3_42577 CCCCAGACGTCGAGTTCAACAGACCCTTCCTCTGCATCCTCTACGACAGAAACACCAAAT Gene GeneID:280699|SERPINA1:NM_173882:106_cdna Constitutive 0 NULL GeneID:280699 21 GENE SERPINA1 PI serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 EMBV3_38426 TGCTCGCATCGCAGAGGCGCTAGCTAGACTGCGTCTGTAGCAGGCTATGTTTGTTTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40399 CAGCCATGATCTCGTTAACGGACACACAGAGTTTTATTTGTGGCTGGCTTGGCTTTTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17739 AGGGTGGAGTTCGAAGAGGTGTCCGGGCATCGGGTTCTTATCAAGAGGGGACCGGGAAAT Gene BVT0102_077376 + 0 NULL GK000013.2:10747955-10760672 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063810 TCONS_00200854 TCONS_00186491 TCONS_00218947 TCONS_00148450 TCONS_00054133 TCONS_00142473 TCONS_00162568 TCONS_00162302 TCONS_00231771 TCONS_00218950 TCONS_00207147 TCONS_00217533 TCONS_00218953 TCONS_00168478 TCONS_00156651 TCONS_00021875 TCONS_00168479 TCONS_00207544 TCONS_00255144 TCONS_00178728 TCONS_00011613 TCONS_00063807 TCONS_00131539 TCONS_00158397 TCONS_00186558 TCONS_00054137 TCONS_00221904 TCONS_00063812 TCONS_00147823 TCONS_00178730 TCONS_00131535 TCONS_00238280 TCONS_00168480 TCONS_00222116 TCONS_00048460 TCONS_00080098 TCONS_00231768 TCONS_00242222 TCONS_00186557 TCONS_00033186 TCONS_00217532 TCONS_00129560 TCONS_00054136 TCONS_00207145 TCONS_00071451 TCONS_00208231 TCONS_00056187 TCONS_00162740 TCONS_00186834 TCONS_00222138 TCONS_00098203 TCONS_00011614 TCONS_00056283 TCONS_00131531 TCONS_00230828 TCONS_00178734 54 XLOC_038536 XLOC_122505 XLOC_112543 XLOC_132266 XLOC_090330 XLOC_031942 XLOC_086898 XLOC_099449 XLOC_099184 XLOC_141259 XLOC_132269 XLOC_125665 XLOC_131531 XLOC_132272 XLOC_103118 XLOC_095111 XLOC_012548 XLOC_126059 XLOC_158076 XLOC_108501 XLOC_007164 XLOC_038533 XLOC_080244 XLOC_096851 XLOC_112610 XLOC_031946 XLOC_135213 XLOC_038538 XLOC_089710 XLOC_108503 XLOC_080240 XLOC_144947 XLOC_135425 XLOC_028592 XLOC_048982 XLOC_141256 XLOC_148886 XLOC_112609 XLOC_019420 XLOC_078273 XLOC_031945 XLOC_125663 XLOC_043222 XLOC_126744 XLOC_033990 XLOC_099621 XLOC_112885 XLOC_135447 XLOC_058449 XLOC_007165 XLOC_034086 XLOC_080236 XLOC_140318 XLOC_108507 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_01464 ACCCCAGACCTCAGGCCTCAGCCCCAGCAGGTGGTGAACGCAGTCAACTGCAGCCTGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41281 TACACTTCCCTCACGTGGCTCATCTTCCAGGTCTGGGGAGGTCATGGGCTGCAGTCCCCT Gene BVV0102_428789 - 1 EMBV3_28040 GK000013.2:33285265-33291603 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044979 1 XLOC_026324 NonCoding TCONS_00044979 XLOC_026324 NonCoding NonCoding LOC100847770 13:33281428-33289539 j TSS32938 1330 0.41203007518797 5 0.836621454993835 6.51049430628087e-24 0 2.08735975149363e-05 0 1.19054749070916e-23 2.86047396047437e-06 0 0.000133414736884103 1.12460047441815e-77 4.9497667298937e-05 5.16359367246549e-06 6.50346242042224e-05 0 0 0 0.000318401910946487 0.00121084272759516 3.492748947921e-05 2.75483885090511e-05 2.16283599697908e-05 2.61337828702049e-06 9.28402265285544e-39 3.43772545006839e-05 0.00013528170258152 4.6597198138893e-07 2.84375390180474e-24 1.32161277663596e-05 0.000345304006581239 0.000140418043692316 7.40238740566916e-30 XR_138835.2 LOC100847770 PREDICTED: Bos taurus uncharacterized LOC100847770 (LOC100847770), 0.0 906 100.00 0.376691729323308 XM_005252587.1 CACNB2 PREDICTED: Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant X1, mRNA. 2e-29 134 89.90 0.0736842105263158 0 noncoding 0 0 0 0 0.139421123728322 0.308931278787304 0.0210800995108927 0.692108054365932 GTTTGATCCCTGGGTTGGGAAGATCTCCTCGAGAAGAAAATCGGCAACCCACTTAAGTATTCTTGACTGGGAGATTCCATGGATAGAGGAGCCTGGAGGGCTACAGTCCATGGGGTTGCAAAAGAGCTGGACGTGACTTAGGAACTAAACAACAGCAACAAAGGGTCTACGTTAGGAATTGCTCGAAACTTCTTGTGTAGAGAAGAGTGCAAGGTCTTGGATCAGAGTGACTCTTGACCTGTTAACAAGATTGGACCAGCAGCATCATGTCATTGAGCCAAGGGCGAGGATTAAAATGAAGATCTGATGATGGATCAGTTTAAAGGGGAAAAAATAAAATTCAACATCGGAGGCAAGAATTGCTGAACATGTAAGGATGAAGGTGAGAGGAAGCTGACGTTGCTGTGCTCAGACCCCCGGAGACCTTTGACCTGCTGGAAGCTGGCACTTGGCAGTCGTCGTGGGGAGGGGACTGCAGCCCATGACCTCCCCAGACCTGGAAGATGAGCCACGTGAGGGAAGTGTAGGGGCATGACCAAGGAGCCAGCAGGTGGGAGCTCTCTGAGCGAGTCTCCTTTGGCAGCGAGCTCCCCCTACGCCCTGGCGGCTCCCGCAGCAGCATAGTGAACGGTGGAGCCAGAAGGCTGGGCTTATGACTTCAAGTGGATTATACTGAACAGAGAGACTTACTGGAGGACACTGAGCTAGCTTATCTGCCGCCACCATCTGGACATTGAGGTGCTTCGCTTGAGATTTCCCTCGAGACTTTATTAACCTCTGTAAAACCTGCAAAAGACGAGGTTTTTAAACAGGAGCGTCTGTACTCAGTACATTACTTTGAAATACGTGAAGAAAATCCAGCCTCTTCCAGATACATAATTTAGAAGAGGAGGACTATTTTAGTAACCTTTTCAGATAATTGTGGATATTTTTCTTTGATACTACAGTAAACAAGTGGTAGCTTTTTAAAGATTAGCTGCCATGGAACATCTGAAACCCTACTCTATTAAATTCCATTGATTTGTCCTGAAATTTGAATGGCATGTCATTTGTTCTTTCCAATAAAAATGGTGTTCTAAGATGACTGCAATAGTCATACCAGTAGTTGTCCTCAAGTAACTGACTTTGAGTGTGCAGATGAAGAACTTGACGTGTGCCTCCCATTTTGTTACGTAGAATATTAAAAAGGCTGGTAGCACCTTTTTGAAGAGTCAAAATTTAATAAACAATTTTGCTACTTCAAAGTACCACAAATAACACTTTATTGACTAAATATTAAAATAACAAATAGGATATTTTTGGCTTAAATAAAATACATTCTTAAAACTAA EMBV3_24301 AATCTCTGGGTCACGGATCAGTTGGGATCAGTGCTTCTTACCCCATCCCTGTCGCTTTGA Gene GeneID:614071|C29H11orf75:XM_002698989:18_cdna Constitutive 0 NULL GeneID:614071 29 GENE C29H11orf75 C11orf75 MGC133535 chromosome 11 open reading frame 75 ortholog EMBV3_39390 CTGAGCGTGAACCTAAGTGACATAAAGACCAACCATTCAGGAAACACCTACTGTGCTAGC Gene BVV0102_135753 + 0 NULL GK000016.2:61847804-61858194 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067814 TCONS_00067811 TCONS_00067809 TCONS_00067813 TCONS_00067812 1 XLOC_041549 Coding TCONS_00067811 XLOC_041549 Coding Coding FAM20B 16:61810680-61855938 j TSS50908 4781 1 TCONS_00067811_3 193 7 0.894513555914002 0.000192237546436539 5.43841125650468e-05 0.000117187252324962 0.000115928362083581 0.000215402544657337 2.63469841739609e-05 0.000142022309027775 0.000347605107474102 0.000531186097681348 0.000196459911312158 5.23776064103004e-05 7.9408403705946e-09 1.30538776900296e-09 0.000257013777601427 6.69141522055062e-05 0.00381178670205321 0.00158184698344474 0.00379843156883688 0.000134946268663584 8.96392861986217e-05 4.05565927212792e-08 0.00158825741834834 0.00147810894820684 0.00267890081910723 0.000150968429657961 0.000127264082062669 6.14311084768454e-05 0.000328047356697269 9.92859487927908e-05 0.000221157193801849 XM_005217108.1 FAM20B PREDICTED: Bos taurus family with sequence similarity 20, member B (FAM20B), transcript variant X1, mRNA. 0.0 8103 100.00 0.939552394896465 NM_014864.3 FAM20B Homo sapiens family with sequence similarity 20, member B (FAM20B), 0.0 2028 82.62 0.419577494248065 TCONS_00067811_3 sp|O75063|XYLK_HUMAN XYLK_HUMAN Glycosaminoglycan xylosylkinase; 7e-140 401 98.96 0.994818652849741 1 coding 0 0 0 0 0.0370830791060978 0.811778258522982 0.0143854136072629 0.760720486782279 CGGCGTGGGGCTGCCCCTCCCCGGAGGCGGCGGGGGCGGCCGTGGCCGCGCCGCACCGCACCGCGCGGGCGGCCATGGAGCGAGCTTAGGGCCCTGCAGGTATAACCGGGACTATGTGGTAGAAGGGGAACCATATGCTGGTTATGATAGACACAATGCAGAGGTAGCAGCCTTTCATTTGGACAGGATTCTAGGTTTCCGCCGAGCTCCCTTGGTGGTTGGCAGATTTGTTAATCTGCGGACAGAGATCAAGCCTGTTGCCACGGAGCAGCTCTTGAGCACCTTCCTAACCGTAGGAAATAATACTTGTTTCTATGGGAAGTGTTATTACTGCCGAGAAACAGAGCCAGCCTGTGCTGACGGAGACACGATGGAGGGGTCTGTCACGCTTTGGCTTCCAGATGTGTGGCCTTTACAGAAACACCGACACCCATGGGGCAGGACTTACCGAGAGGGCAAATTGGCCAGGTGGGAGTATGATGAGAGCTACTGCGATGCTGTGAAGAAAACGTCTCCCTATGACTCCGGCCCGCGCCTCTTGGACATCATTGATACAGCTGTCTTTGATTACCTGATTGGCAATGCTGACCGCCATCACTATGAGAGTTTCCAAGACGATGAAGGCGCTAGTATGCTCATCCTTCTTGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAGAGAAGCATTCTCGCCCCTCTCTATCAGTGTTGCATCATTCGTGTGTCCACCTGGAACAGACTGAACTCCTTGAAGAATGGTGTGCTGAAGTCTGCCTTAAAGTCCGCCATGGCCCACGACCCCATCTCCCCAGTGCTCTCTGACCCACACCTGGACGCTGTGGAGCAGCGGCTCCTGAGCGTCCTGGCCACCGTCAAGCAGTGCACTGACCAGTTTGGGATGGACACTGTGTTGGTGGAAGACAGGATGCCTCTCTCGCACTTGTAGTTCTCCACAAAATAAGTGAAACTGCTTTTTACAAAGATAGAGAAACAGCACAATCAATTCCAGATGGTATGAGATGGATTGGAAATGGCCAGCAGCGTGTTCTGGTAATAGGGGATAGGGTGGCCTTGGATTTCTTTGGTGTTTGCTGTGGTAGAAGCTAAAGCAAAGACTTACAAGCTTCAGACCATGGAACCGTACCTGCTGAACCACCTTCAGACTTCCTCGGCGTTTGCCCATCCTAGCAGTGGGCAGCACAGTTGGTCAGTCTTAATTTCTCATGCCAAAGGATGGAAGAGAGGTGTGACATTCAACTAGGTTAATGCTGGGGTTGGTTCTGGAGTGTGTATTTGGAGTTCATCCTTATAGTCCTTTCTCCACACTTGTGGATCTTCCAAAAACACTTTGCAGTCTCGAGTCCTTTTTTCCAGGATTAGTCAAATTGGGGATTTTACTGCTTCCTGGGGAGTGGCAGCAAGGAACCTGGCATTCTGTTGAGCCAAAGTAGTAGGGACTATGCTGTTAAGGTAGAATTAGAAGGAAGGACAAAAGCAGGAAGGATGTTTGGGCTTTTAAGTAAGAAGGTGGTAGTGCTTTTGATGATTCTTAAAGGAGGGAAGGAGAGAGAGAGAGAGACCTGCTTGGTAGAACCAGAATCAAGGAAGTGATTGAATTAGTGAAAAACAGGTTCCCCTGTATTTAAGTTCTTAACATATATAAAAGCAAGCATGACTTGTACCTAAGTAAGATTTGCATTCTCATGGTTATGTCCAAATTAACCCAAAAAAATTGTCTGTAGAGAACCTGCTGTTACAACCCAAGCACAATTCTGTTATGGAGGTTTACTTTCTTTTTTGCCCCAAACAGGCAAATCCTTTGCAGATTAACAAAGCAAACTGAAGATAACATCTTGGGTAAGAGTCCGGTTGCCTGCGATCTCTGCCATCCTGATTTCCAAAATGAATTTTCACTTTTGTCTTCAAGGTATTTAGTTGTTAAAGCTGTTGTTCCCGAGAGACTGGCAATCCTATTTGTGCCTTTCTTGGAGAAAAGCCAGCTTACTCCTGTAGCTAATAGTTCACATCCTGCTGGTGGCTGGACCTGTCTAGTGATTTGGGCCACGCAGAAGGCTAAAAACAAAGATTTTAAGCCTTCTGAGCCTTAAAATTAAGGTGGTTCCAGGAAGAGCCTTAAGATTTTGATTTATGTCATACCCTGTTTTCATCATTTAATCTGGTTCTGAACCCATGAGGTAGTATTGTTCTTCTGTCTTCTATTAGCACTTTGAAATATCAGTTTGCTAAAACAGGCTAAGTTGTGTGTTCTGGCAAAGTGATTTTGACATGTAACCAGTGGCATTAAAATATAGGGCGAGGAGAGCTGGCCTGGTGAGTCCACTTGTGCGTCCTCAGAGCTGGAAGCTTCTCTCCTGCATTTTGTCTGGGGACTCTTTGGGTTTTGACTTCTGTGAAGCAAAGACTAATATTTAAACAGTGTGGTTGAACAAATCTACTGCCAGCCACTGGAGACCAATTTTAGGTAACCGCCCTTTCAAAAGTGGTTTAGAATTTATGCTCTAATTTTCTCAAATTGAAAGTCAACTGAGTACCCAGTAACTACTTTAACATGAAATTAGGATGCTTTTGTACTTAGTTTGTACATTTGGAGATGTACACAGAATGGGCTTAGTTATTATTTAAAATGGATTTAAGAAGACGTGTCAGCACAAAACACTGAGCTAGCGTTAACAGGAAGAGGCGCTGATTTCAGTTTTAAAGTCGTGTACTGTGTGCGTCCAGGGAGTACACATTTGAGCTTGAGAAGGGCTTGGATGGTGCTCACCTCAAAGCATCAGGGAGCCAGTAAGAAGGTAGTCAGCTGCTGTGCTTGGTAAATGTTAGTTGAACTAATTCTTTCAAACACGTGATATTGTTCTTTGGTATGCCCCAGTGGAATGAGTAAGAACTGTTCTCAAACTTGGGAACTTTATTCATAATGCTGAAGGCAGAAGATCTGTTGAGGAAAAATGCAGGAGGGAAGGCTGCTTTGAAAGCGTCTCATTCTTTTTTCCAAACACTGCTTCATTCTCCTATATTAATATGATCTTAAAAAGTGTTCAGATGTATAGTGGTTAAAGTTAGAATTGTGCTAAGAGAGTGGTGTGAACTGATGCTTAGAATATAAATTTATGTTCTAAGTCAATATTGGATTAAGCTGGGAAAAGTGTGTTTAGGTAAATCTCGGAGAAAACCAACCATAAGCTCTTAGTCCTAAAATTCATAAACATTATATTCTGATTCAAAAAAGAGGTACATATTGTTTTTTAAAGTTTTCTAACACTGTCCTTTTTATGGTTTATCTTTTAGAATTGAGGGTTGTTACAATCAGACAGGTCATTGGAAGGGTTTTTGGTTAGTCTTAAGTTGGGTATGCCTAGCTAACATCTAAAGATAAACATGGATACATTTCAATATTATAAAACTAAGAAAATCAGAACTGAGTAGCATTTCTGCACTCCTCCTCCTACTTTTTAAATATATTTATTCCAGAGTTTGAGGGAATATGGGTATAGAGGTTTCATCCTAAAATTTTTCTTTAATATGAAGGTATATTATTAGTTTGGGGTAAATAATTTTCTGTGCAAAACAAATTAATAGGATCTGACTTGCTCAGAGTATTGCTTAATAATATATTAATAAGGCATTTCTCTGTATTTGCTCTCAGGATTAATATGTGAAATGAAATGTAATAAGGAAATGGGAGAATTCAGGTACATCCATTGTATACTGTTTTGGGCAAGATGAATCCTCTACATGGCAAAATTTCAGTGTCACCTGAAAGCCACATGTTCTTCCAAAGAAATCCATCTTTTCTTTTAAAAAAAAAAAAAAAGAGGCTTTTGGCCTTCCCCTCGTATCCACCGTGTTCCTTCACCCTCTCTTCTCCACAGCTTCCATATTCTCATTTGACCAGTCCATGACCACACCTCAAATGGTGGTAAACAGCATCTGTCGTTTTGTGAGCTTGGGCTTCAGGAAACATGAGTCAAGGTATATGTATGTATATAGTCATATATGTATTCTAACAAGAAAATATTTATTTTCACACAGGGAAACACTGACTTATGTTGCTGAAGAACCTGAAGCTAGTAAAAGGTTCTCAGTCTCTGAGCGTGAACCTAAGTGACATAAAGACCAACCATTCAGGAAACACCTACTGTGCTAGCCAGGGCCGGTGCCCGAGGCAGATAGACCCGCCTCGTAAGACTGCTATACAGCAGGGGAGGGCCAGTTTTCCTCCCTTCCACTCCTCAAGTCTGGGTTGAAAAGGTGGGGGCTGGATACTATACTGCCACAGGTTTTTAAGGAACTAAGGTGTTACTCAAAAATACAAAATGTTTAGGGGGGGAATCTGGGAATAATTTACCAGGAAGTAATTTATTTGCTTAAGAGAGAGGTGTTAAGAACCACGACCCTCGGTTCTAATCTGCCAAGGATTTCCTCTCAGAGCTCTTGCACAAATAGAGGTTGTGCTTGGTAAGACATCAAACAAGACAGATATGCACCTAAATTTCTAATGTGTTCTATGGGTTTCAATTCTGAAAAAAAAAGACAATGAATAAAGATTTTAATAAGTACCAGCGTATCATGTTTTCCTCTTATTATCCCCCCACCCCACTTGCTGGTTCAGGGTATATCGTTTTCAATTCAGATTTCCATTTTTGTTAGGGGACAGAAGATTACATCTTCTGCATCTGCATAAACTTCCACAGGGGTTGTTTCACAGAATCAACGACAGATAAGACCTTTACACTTCTTATTACACTTTACTT EMBV3_00717 TTAACTGCCCTGAAATGACGGACTACAAGTTATGATGTGTGTCATCTGCACTTCACTCGG Gene GeneID:508055|CNOT7:NM_001034312:16_cdna UTR3_Alt 2 NULL GeneID:508055 27 GENE CNOT7 MGC128204 CCR4-NOT transcription complex, subunit 7 EMBV3_08297 AAACAAAAGTATCAAAAACTCATTTTAATGATGATCATTCCTTTTCTCTGAGCTGTCGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24231 GTTGTACAGGCTGGACAGATTCAGCAGCAGGTCCAGGGGCAGCCATTAATGGTACAGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31325 GTGGCTCCCAGAGATTGTGCTGGAGAACAATTCGCTCAAGTACACGACCAAGGAGATCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18934 TCCATGAGAAATCTGAAGGCCAGCTTGGAGAACAGCCTGAGGGAAGTGGAGGCCCGATAT Gene GeneID:506480|KRT18:XM_002687244:72_cdna Constitutive 0 NULL GeneID:506480 5 GENE KRT18 NULL keratin 18 EMBV3_31365 ACAGTGGTTCTTATGGACAGACCCAGAACAGTAGCTACGGCCAAGATCAGCCCTCCATGA Variant GeneID:280796|FUS:NM_173912:206_cdna 250^573 2 EMBV3_01042 GeneID:280796 25 GENE FUS MGC139714 fused in sarcoma EMBV3_36387 TCTTCCATCTCCTTTCGTGCTGTCCGCTAGGACGCGCGCACCTGCTGATAAGTTTCAGGT Gene BVT0102_295723 + 0 NULL GK000024.2:42133359-42256653 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140301 1 XLOC_085098 Coding TCONS_00140301 XLOC_085098 Coding Coding PPP4R1 24:42091110-42140257 j TSS104756 5387 1 TCONS_00140301_4 893 0.0569890477074438 19 0.890774427216864 2.47023046055488e-26 0.000641492791783093 3.68372894536826e-17 2.29588836711669e-76 9.6404529551496e-05 4.7266340708694e-60 1.3216633576138e-33 1.44753815315973e-27 4.23699942503128e-24 1.12281667898606e-05 7.63763273604887e-20 1.91753270881922e-13 1.01670470338737e-09 8.32683253861507e-14 2.66411654190527e-19 8.31782335033445e-19 6.20334735426297e-42 2.62882283287369e-22 2.46839111961986e-38 8.58593230368175e-49 5.13041145239672e-67 2.23479083308633e-61 7.08612970310425e-20 1.60124275267714e-32 6.4528323939754e-30 6.33506366241966e-28 7.09922437720927e-36 9.93942949701474e-05 6.21053240226898e-41 0.000139662417682205 XM_587353.6 PPP4R1 PREDICTED: Bos taurus protein phosphatase 4, regulatory subunit 1 (PPP4R1), mRNA. 0.0 6448 98.67 0.676443289400408 NM_005134.3 PPP4R1 Homo sapiens protein phosphatase 4, regulatory subunit 1 (PPP4R1), 0.0 2800 76.87 0.6771858177093 TCONS_00140301_4 sp|Q8TF05|PP4R1_HUMAN PP4R1_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 1; 0.0 1481 84.05 0.998880179171333 2 coding 0 0 0 0 0.0515433898852251 0.622945340199612 0.0783704047408951 0.292372710945887 AAAAGGCTCCCTGTAGGCAGCGGTGCTCATGTAGTGAAGGCCGGCTCTTCCATCTCCTTTCGTGCTGTCCGCTAGGACGCGCGCACCTGCTGATAAGTTTCAGGTGTCGGTTACCGCAGCTCTGGGGCTCCTGCAGGGTTAGCGTTGGAGAGTTGACTAAGGACTGTCCCCATGCGGGGCCTTCTCAGGCGTGTGTTTAGGTCCAAGGCTTTTTCTCGGTGGAAGACGCCCCTCTGCAGCAGGTGTCGAGGACTGTCTCATTCATTTACTGTCACTTGGCTGCCCTGGGCAATCAAAGCCTATGAGATGAGCTGCAGTTTTCTCCTTCACCCTTAAGGAGCACGGTCTGGAAGGGGCAGCCCACCAGTATGGAACTCGGCCTGATTTCTTTAGGACTCTCCAGACTGCTGAGGGTAGAGCAGCAGGGGCGGTCACCCTCCGTGCCCCTCTAGCGGTTCCCAAGCAGCTTTGATGATCCCTGGACTTTGTCTCACAAGATGACATGCTGACGCCGCTGGGGAGACTGGACAAGTATGCTGAGAGTGAGAACGTATTTAACAGACAGATGGTGGCCCGGAGTCTGCTGGACACGCTGAGGGAAGTGTGCGATGATGAAAGAGAGTGCATTGCCGTTCTGGAGAGAATCAGCAGATTAGCTGATGACTCAGAGCCGACCGTGAGGGCAGAGCTGATGGAGCAGGTGCCTCACATTGCCTTGTTCTGCCAAGAAAACCGGCCAGCAATCCCGTACGCCTTTTCAAAGTACTTGCTGCCCATTGTGGTTCGCTATCTCGCAGATCAGAATAACCAGGTAAGAAAAACGAGCCAGGCAGCTTTGCTAGCCCTGCTGGAGCAGGAGCTGATCGAGCGCGTCGATGTGGAGACCAAGGTGTGCCCTGTCCTCGTGGAGCTGACAGCCCCCGACAGCAACGATGACGTGAAGACGGAGGCTGTGGCCATAATGTGCAAAATGGCCCCCATGGTTGGCAAGGACATCACGGAGCGTTTGATCCTCCCTCGGTTTTGTGAGATGTGCTGTGACTGCAGGATGTTTCATGTTCGAAAGGTCTGTGCCGCCAATTTTGGAGATATTTGCAGCGTCGTCGGCCAGCAAGCTACTGAGGAGATGTTGCTGCCCAGGTTTTTCCAGCTCTGCTCGGACAACGTGTGGGGCGTCCGCAAGGCCTGCGCGGAGTGCTTCATGGCCGTTTCATGTGCCACGTGTCAGGAGATTCGACGGACTAAACTGTCAGCGCTCTTTATTAATTTGATCAGTGATCCTTCACGTTGGGTTCGGCAAGCAGCTTTCCAGTCTCTGGGACCTTTCATATCTACGTTCGCTAATCCATCTAGCTCGGGCCAGTATTTTAAAGAAGAAAACAAAAGCTCAGAAGATACATCAGTAGAAGACAAAAATAGTGAAAAGATCAGGGGTGCAGATGCTCCAGAGGACATAGAGGCCAGGCCCACTGGGGGCGATTCCAGAGTCCACCTGGAAGAGACACTGGCGGAAGGTGCTGAAACCCTGAGGCAGCCGCCGGGTGAACTGAGCGCTCCCGCGGAGAGCTCCTCACCTCTCCGGTTGTCCCCGGAGCCTCCCCCAGACGCGGCTGGCAGTGAGGAGGAGCAAGAGCCCTGCCCCTGCGGGTTAGCGTCCCAGCCAGAGGCGGGCACCGGTGCACAGGACTCAGCTCCCTTGGACCAGGAGCTGTACAACTCCTTCCACTTCTGGAGGACTCCTCTCCCTGAGATAGACCTGGACGTGGAGCTGCAGCAGGGCTCCGGGAGCGAGCCTGGCCCACAGGGGCTGGATGTGGAGCCCGAAGTGCCCGCCCCCGGCTCCGCCAGCATCACCATGGCCACCAGGAAGGAGCTGGAGGAGATGATAGAAAACCTGGAGCCACACATTGACGACCCCGACGTGAAAGCACAGGTGGACGTCTTGGCTGCTGCCCTGCGCGCCTCCAGCCTGGACGCCGGTGATGAGGCTGGCGAGGCCCCCCGGAGGGCCCCCCAGGACGAGCTCCCCAGCTGCCGGCTCGACCATGACGCCGCAGGGCCTTTGATCAGTGAGGAGACCATGGACTCTGCCCTCCACTACATTCACAATGACTCGGACTCGGGCACCAGCAGTGGCTTCAGCCCCGATGAAGAAAGGAGAGCTAAAGTCCAGGACGTGGTGCCCCAGGCCCTGCTCGACCAGTACCTGTCCATGACCGACCCCTCGCGGGCACAGACCGTGGACACCGAGATTGCCAAGCACTGTGCCTACAGCCTGCCGGGCGTGGCGCTGACGCTTGGCCGCCAGAACTGGCACTGCCTGCGCGAGACCTACGAGACGCTGGCCTCGGACATGCAGTGGAAGGTTCGAAGAACGTTAGCCTTCTCCATCCACGAGCTCGCCGTCATCCTGGGAGACCAGCTCACAGCTGCAGACCTGGTCCCAATTTTTAATGGATTTTTAAAAGACCTCGATGAAGTCAGGATAGGTGTCCTGAAGCACTTGCACGACTTTCTGAAGCTTCTTCACATCGACAAAAGAAGAGAGTATCTGTATCAGCTTCAGGAGTTCTTGGTGACTGACAACAGTAGAAACTGGCGCTTCCGAGCCGAGCTGGCCGAACAACTCATCTTGCTCCTAGAGCTGTACAGCCCCCGGGATGTGTACGACTACCTGCGCCCCATTGCCCTGAACCTCTGTGCGGACAAGGTGTCCTCCGTGCGCTGGATCTCCTACAAGCTGGTCAGCGAGATGGTGCGCAAGCTGCACCGGGCAGCACCGCCCACCTTCGGGGCGGACCTCATCCAGGAGCTGGTGGAGAGCTTCGGCCGCTGTCCGCGGTGGTCCGGGCGGCAGGCCTTCGTCTTCGTCTGCCAGACCGTCATCGAGGACGACTGCTTGCCCATGGACCAGTTCGCCGTGCAGCTGATGCCACACCTGCTCACCTTGGCGAATGACAGGGTTCCCAATGTGCGCGTGCTGCTCGCGAAGACACTGAGACAGACTCTGCTGGAGAAAGAGCACTTCCTGACCTCCGCCAGCTGTCACCAGGAAGCCGTGGAGCAGACCATCATGGCCCTGCAGATGGACCGCGACAGCGACGTCAAGTACTTCGCCAGCACCCACCCGGCCAGCACCAGGATCTCCGAAGACGCCCTGAGCACGGCCTCCTCCACCTACTAGTTGGCGTGGTCCCGGGGGCCTCCCGCTCCCAGGGAGCCGAGGTCCCACTGGCGCCCACGCGTGGCCGGGACAGCCTTGGGGCCCGTCCTCCCACGACACTCGGCTGCAGGTGCAAGTTGCCTACACCGATTCCAGGGATTCTCAGAGTCAAGAGAAAGTACAGTCAACGCCGTTGTTTCGTCTTGACTTGAAGGGAAAACACTTTTCTCAGAGGATTATAATCGTCACCGAAGCCTTAAATCCTTCCGTCTTCCTGACTGAACGAAACTTGAATTGCCCAGCGTTCTCCTTGGAAGGGATGCGACGCCGAGGCCTCTTTGCTTCCCGCTGGTTGATCTCACCTCCGAGAGACGGAAGCGCAGCCAGAAGGTGGAGACTGCCAGCACCAGGCCTCGCCGTGTCCACCCGGGCAGGGCCCTGCAGGGGCTGTGGCCGCCGCCCCGTCCAGCCCAAAGTGTGACTAGTTTAGCCGTGCATAAACGGGGAGGAGATATTTTTTGGATTTCTCCTGAGGGCTCAATGCTAACACTACGTGGAGCTGATTGTGACTCTTAAATGCAGCATATTGCTGTGCACACTCACAGAGTCTGCCGAGCGTCTGTGTCCTGGTTTCTTCATGCTGGTCATGACCCGGAGGAAATTTATTAGCACGTATTCTGTATGTCAGGTGTTTTTAACTTGATCATGATCGGCTCTGAGGTGCAACTTGTCTCACATACTGTATACCCCGTGCCCCCGGGGAGGGCCGCAGTCTGTAATCATGCTCTTGGACTGTTGTGCACAAGTTCTCTTGTCCAAATAAAATTTATTACTAAGATCTATACAGAAACGGACACACTTCTGACTGCTTTCTAGAATAAATGCAATTTGTGACCTGTATTAATGATTTTAGTATAAAATGGGAAAACTGGATTAAAATATTTGTCTTTTAACTAGTTTGGTAACTTCTTTGAAACTTGTGCACATCCTGGGCTGGTAGCGGGGCCTCCCCCCCGAAGGCGAGTATGCACCCCGGTCCCCACCCTCCCACCACCTGGGGGGGGGTCTTCACTCCCAGGAAAGGCCTCTGAGCCCAGGTCTGTGCGTGCGAGGGGATGGTGAAGCCTGCCCGCCCCGCGTCTGGCAAGTGAGACGCCGCGTGGACAAGCTTCGTGAAGGCTGTGAGAGATGCTCACTCAAGTGGCTGCGGCACTCCCGTGGTTTCGGTTCTGTCTTCTCAGCTGGTGGGGACTCCCCAGGCATGTCATGAGCCCACTGTGACCTCAGACCTCAGGGATCCACAGGCTGCTTCCTGCGCTTGTCATTACAGATGAGCCTCTGGTTCCTCCTCCTCCATTATAACCGGATGTTTGTGCTCTGGGAACGTGTGTGGACAGATTCACGGAGATGAACAAAAAAGTAAACACACAGGTAATGTGTGACGCAGGTAATAAGGGCAGAGCCACAGAGTAAAAAGTGATGGGGGTGGTGGGCAGGCGTTAGGGGAACGCATCTGTGAGTCAGTGTAAGAGCAGAGACGGAAGGAGGTAAGGCCTCTTGATGTCAGCCTAGTTTCTGAGATGCATGTTCTCTGCTATTAGGCTATAAAGATATACTTTGTCCCTTCCCCCCCATTTCAGTTCCGTAAATTAATTAGAATTCTACACTAGATCAAACCAGTCAGTCCTAAAGGAAATCGACTCTGAATATTCATTGGAAGGACTGATGCTGAAACCGCAGCTCCAATACATCGGCCACCTGATGCAAAGAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGACGACAGAGGATGAAGTGGTTGGGTGGCATCACCGACTCAATGGACATGAGTTTGAGCAAGCTCTGGGAGATGGTGAAGGACAGGGAAGCCTGACATGCTGCTGTCCATGTAATGGCAAAGAAGCAGACATAACTGAGCGACTGAACAACACTACTAGTAGCTGCATTTTTTTTTAAGCAGTGGCAAGAGTAACAGTCCATTTTGGGGTAAAGAACCTGGATTTAGGGTCAGCTAGAGCATCAGCCAGCTCCTCCTGTGGCACTGGGCCATGTCCTCACTGTAGGGTCCTAAGCTGGATTCCAGGGGCCTCCACACAGCGGGCAGGGGAGGACACCACTGAGTGATGGTCAAGGCCTCCCGGCGTGGGACACCTTGGACAGTGCTCAAGAGAAGG EMBV3_31545 GGGCTCGGCATCTGCCTGTTGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGAC Gene BVV0102_302130 + 0 NULL GK000019.2:38899747-39013104 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096737 TCONS_00096739 TCONS_00096742 TCONS_00096743 TCONS_00096740 TCONS_00096738 TCONS_00096741 1 XLOC_058045 Coding TCONS_00096737 XLOC_058045 Coding Coding SNX11 19:39012142-39018491 j TSS71813 3048 1 TCONS_00096737_3 270 7 0.520951480781348 8.07113425187236e-07 9.20441644004614e-05 1.22817026764648e-10 3.94239358515221e-05 0.00119025371757494 6.03002936170268e-07 0.000648695237243349 5.33649122709438e-10 0.00055278321582193 0.000205372334420156 2.31181074840102e-05 2.04386332830795e-11 2.15338064593527e-16 0.000533543671841287 0.000214810814107431 0.000656171293506319 0.000575484755668118 0.000444080636253681 0.000324285731235451 1.65821527714854e-06 1.41307077740645e-11 0.000835378953536927 1.33022387987306e-05 0.000886340008594427 8.11244109242628e-05 1.33189465917208e-07 6.19769697777047e-06 0.000138482355169362 2.0511432757452e-05 0.000446636009161733 XM_005220588.1 SNX11 PREDICTED: Bos taurus sorting nexin 11 (SNX11), transcript variant 0.0 4331 100.00 0.78740157480315 XM_005257260.1 SNX11 PREDICTED: Homo sapiens sorting nexin 11 (SNX11), transcript 0.0 1849 80.22 0.68011811023622 TCONS_00096737_3 sp|Q08DD7|SNX11_BOVIN SNX11_BOVIN Sorting nexin-11; 0.0 551 100.00 0.996296296296296 1 coding 0 0 0 0 -1.36272132599237 0.00838137808546744 0.0208306121853743 0.706086733345363 CCTCAAAAGCTCAGCAGATGTTTCCTTCCAATGGGCTTTTGGTGTAGGATGTTGGAGAACCAAGAGCAGGAGGAGGTGATCACTGTGCGTGTTCAGGACCCCCGCGTGCAGAATGAGGGCTCCTGGAATTCTTATGTGGATTATAAGATATTCCTTCATACCAACAGCAAGGCCTTTACCGCCAAGACGTCCTGTGTGCGCCGCCGCTACCGGGAGTTTGTGTGGCTGAGAAAGCAGCTCCAGAGAAATGCGGGTTTAGTGCCGGTACCTGAACTTCCTGGGAAGTCAACCTTCTTTGGCAGCTCAGATGAGTTCATTGAGAAGCGAAGACAAGGTCTGCAGCACTTTCTTGAAAAGGTCCTGCAGAGCGTGGTCCTCCTGTCAGACAGCCAGTTACACCTCTTCCTGCAAAGCCAGCTCTCAGTGCCTGAGATAGAAGCCTGTGTACAGGGCCGGAGCCCTGTGTCCGTTTCTGACGCCATTCTGCGCTACGCTATGTCCAACTGCGGCTGGGCCCAGGAAGAGAGACGGGGCTCTTCTCACCTGGCTGAAGGAGACCAGCCTAAGAGTTGTTGCTTTCTCCCAAGACCCGGCAGGAGGAGCTCTCCCTCACCGCCTCCCGGGGAAGAAAAGGATCCGTTCGAGGTGTGGGCTCCTGTGGTTGACTCCGAGGCTCCTCCCTTGGAGAGCCCCACCCTCCCACCCACCTCCTCTCCATCATGCTGTGGTTTTGCAAGACCTGATGAGGGACTCTCTGCTTCTCAGCCTGTGAGGAGGGTCCTGGGAGGGGGCCACGCTGTGCCTTTGGACCCTGGTCAGCTGGAAACAGTTTTGGAGAAGTGAGCTCTCCTCGGAGCTCTGGGTTCTGCTCTGAGGTGGATGAAGGTGATGCAGGCAGGGAGACTTGCTCAGGTGGGGTTAGGCACAGGCTGGTGGTGGGAGGCTGGTCTGCTTCCTGTTTTACCATGGCCTCTGCTCAAGTTGGCTCTGTGGAGATTGGTCATAACTCCTCAGGCTTCTTCGATAGGGATAAGACACTGTGCAGGTGTTTGTAAGTTAAGCACAAGACCCAGGAGTTGTTGGTTCTGAGCCAAACCCCACATTTACTCTCCTGGAAGCTGAATTTCTTTAGATGTCTGTTAATGGGTCCAGGAGCACTGACTCAGGTGACTGGTGGGGACCTGTAGGTGGCAGACTTTAAGCCGCCTTATCAGAGATCGCTCCAGCAGAAGTGCTTGTGTTTCTGTTGTGTCCTTGTGTTCCAACTGGCTGTTTTTGCTGAAGCCCCTGGAGCACTGGTTTCTGGGAGGCTGGCCCCTTGCTACCTCCTCGCATGGATGGGGGGTGAGTATTTTTTCTCCCACCTCCTTGCTTTTCCTCCACTCATAACCACTGAATGGAGCGGTGCTGTGACTCCTGACACTGGGGTTTCCTGCGCATCCCAGGACCTCGGCCTGGCTGTATGGGGCCTGAGGCCTGTGAAATAGCTCGTGGCCATCCACAAAAGAGAAAGGTTTGGTCACAGCCAAAGGACAGGGAACGATTCAGGGGGCTTTGTTTTGGAAAAGATACCCTGGACTGTCCCTGCCTCTGTGGTTATAAAGCCGAGATGGACTGTCTTCTCTGCAGGGTTAGCTGAGCTCCTTTCTTGTTTGAATCCTTTTCTTCTCCCTTAGTAACAGCTCCCTTTCCCCAGGGCTTCAGCCACCACGTGTCCCTCTGCTGTGTTGCGGGAGGCCGTCTGTTCAGTCCAGTGGGGTGTGGGGGCTTTGTTTCTGCCTGGAGAGAGGGCTCTGGGGATGGAGATGAGAAACAACACGCCTTCCTTCAGACAATGAGGCGTCCTGCCCTCCTGCTGCCGTAATTCTCTCCTCTGAGAGCTGGAGCTGGAGGAGACGTGCCGCTGGCGTTCTGCTTATCTGCCCTGGCGTCTGTGTGTTTCTTCTCCATCTCGCCCGCCCCTCCCTCCCCTGGCCCCCGCACCCTGTCCGTGGGCTCTTCTACTACTCGCCTGTGCTGTGGGACTGTCATGGCATTTAGTTCAGAGTTGCGGGGCTTTGGCCTGAAATAAAATTCAAGTATTTAAGACTGTTGCTGCAGTTGGTGTCTAACAAGCTGTAGCAGTGGAGGAGGCATTGAGGGCTGGCGGTAGTCACTTTCATAAATCATGAATTTATCAGTGTGGAAATAATGGTTCAGAACTGTGCACGGCAGCTCTCCTGCATTGTGTGCGCAGCTCAAGTTCACCACTGGAGAAAGGACTGTCTTCCAAAGAGGCAGGATCCAGCTCTTCTCACAGTGATGGGCATGAACCTTGTTAGGTATAATTTACCTGATGCTGCTTCCATCCTTGCAGCCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCCGAGCCCTGGCTGGGACTCATCTCTCTTCTCTGCCTGCCTCCCCTGGGTCTCTCTTTTATATGATGCAGCAGAGCAAGGCGAGGAGAGAAAACCTACAGAGGCAAATCCAAAATGTCAAAAGAAGTTCATTTAAAAGGGGAAAAAAACTCCATACACAACCCTCACAAAAACCCGACAGATGCTAAGCTAATGGCATCCGCTCTGCCGATTGGTGGGGATGACTCATGAATATTAATGAGTCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCTTGAAGCTCTCTGATCTCGAAACTTCCAGACAGGAGCCGGAGGTGGTCTGTGTCAATTCCCTACTCAGCCAAAAAACAGCAAGCTGGGGCGGCTTCTTCTGTTCACTCCTTTTCTTCCTGGAGTTGGTGCTCAGCAGCCAGTTCTGCCAGCAGGGTTGGCTGCTGGGACAGCAGGAGCCGGTCAAAGACACGGATGCGATTTTTCTGACTCCTGGCTTTTTTAATGATCCATTATCAGCAATGCATACAGCAGGACCTCAGTCAATCCAAGGCCAGGCGCCATTCCGCCACTGTCTTTTGCAGAGTTGAGTGTAGGCCATGGAAGGAGATGTCCTAATGGGGGAGAGTTTTTCTAG EMBV3_27267 CCCCAGCCAATGTGGATGCTTCGGTTATGTTCAGGAAATGGAGGGACAGTAAAGGAAAAG Gene GeneID:537885|UBE2R2:XM_002689798:85_cdna UTR3_Alt 2 NULL GeneID:537885 8 GENE UBE2R2 NULL ubiquitin-conjugating enzyme E2R 2 EMBV3_11869 TGGAGAAAATTAGTCAGACAGCACCAGAATGGACAGCACAAGCCATGGAAGCCCAGATGG Gene GeneID:540223|COPS4:NM_001034694:25_cdna Constitutive 1 NULL GeneID:540223 6 GENE COPS4 MGC128170 COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) EMBV3_19611 GGGATTTTATTTCCTGACCTGGGATCAAACCCACACTCCCTGCTTTGGAGGGCCAAGTCT Gene BVT0102_059154 + 0 NULL GK000015.2:72932957-73440853 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062265 TCONS_00062268 TCONS_00062269 TCONS_00062261 TCONS_00062270 TCONS_00062262 TCONS_00062266 TCONS_00062263 1 XLOC_037247 NonCoding TCONS_00062263 XLOC_037247 NonCoding NonCoding - 15:72995288-73068011 - TSS46176 605 1 TCONS_00062263_1 105 0.282644628099174 5 0.991749401831633 0.00130778476158049 1.2395267895179e-06 7.93339479558839e-05 2.64570620771969e-13 1.37370804529702e-47 1.13378822725092e-108 0 0.000232106079033811 3.27971331968649e-178 0 0 0 0 0 0 0 0 0 0.00177718679661333 6.6315904575461e-05 9.26326913059152e-71 0 0 0 0.000650065604472554 0.000612930581355283 0.000132922731242945 0 0 0 XM_005212363.1 ZNF514 PREDICTED: Bos taurus zinc finger protein 514 (ZNF514), transcript 4e-22 109 86.32 0.153719008264463 0 noncoding 1 1 0 0 -0.213091897903568 0.140316315766558 -0.100761635710661 0.106309382651973 TGGTCTGGGAGGTTCAAGATGGCTTCACTCATGCGTCTCAGAGCTGCTGGCTGGCTGTCTGCTTCGGCACTTTGGTTCTTCTCTACAGCGCCTCTCAACTTGCTGGAGGGTCATCAGTGTGCACGCTGCTGTTGCTCCCCCGCGTGCAGGTACCTGGACCATTCTGGATTAGTAACCCCGTGGGCCAAGTGCACTGTTCTGGAAATCAACACTAAGATTATATGTCTTCCAGTGGAGAGGCATGTGGGATTTTATTTCCTGACCTGGGATCAAACCCACACTCCCTGCTTTGGAGGGCCAAGTCTTAACCACTGGACCACCAGGGAAATCCAGTAATACCCACTACAAATCAAGAAAACAGCTGGAGCTTGAGGGGCCCCAAGAAGCTGCTTGCTCCTTACCCCACACTCAGCTTGATCTCTTGGAAATTGCCAACCCTGGAGAGAAGCAGTTTTGACTTCCCTTCTGGCCTGGAAAAAATACAAAGGGAACTTAAGTTTTTAGAAAATGTTTTGAAATCATCCTTGTGTGCCACCTCTGACTTAACTACTAACAATGAAAATAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACA TCONS_00062247 TCONS_00062248 s 5' 315120 TCONS_00062247 TCONS_00062248 s 5' 315227 EMBV3_20898 AGGGCTGATTCTGGGATCCTGAGGAGGGTGAGTCCTTTGCTGCCCTTGTCTGGAAGATTT Gene GeneID:533894|LOC533894:XR_083678:606_cdna Constitutive 0 NULL GeneID:533894 5 PSEUDO LOC533894 NULL similar to Prolow-density lipoprotein receptor-related protein 1 precursor (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) EMBV3_19426 TAACAACTATTCCACACTCAATGAAAGAGGGGACCACAACAGAACACTGGACCGACCCGG Gene GeneID:515187|CTNND1:XM_002693586:52_cdna UTR3_Alt 4 NULL GeneID:515187 15 GENE CTNND1 NULL catenin (cadherin-associated protein), delta 1 EMBV3_17084 TTTACATTGTTTTTGGTCCCTTTGGGCAGGGTCGTATTTTGTGGGGAAGGCCCTGCTCTG Gene BVV0102_186248 + 0 NULL GK000010.2:36715220-36757302 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016823 TCONS_00016822 1 XLOC_008918 Coding TCONS_00016823 XLOC_008918 Coding Coding INO80 10:36618283-36743213 j TSS11651 7360 1 TCONS_00016823_13 1496 0.0112771739130435 35 0.941366696283489 8.39293255043999e-133 9.05311859138898e-08 3.28640132543303e-05 4.86394330123067e-280 0.000101345513885143 2.3480742882109e-204 2.71782427867566e-250 7.87921103045015e-05 1.1657171976487e-102 4.81977643383967e-188 3.32479870263112e-06 3.32827059828446e-76 6.94047447695425e-05 7.3223483898441e-95 6.561799279977e-05 2.13850316016791e-81 1.31204710871102e-40 1.22298333077875e-37 2.40567115565884e-92 1.05235982564186e-321 2.1861610128126e-13 0.00036757333062417 7.87737890720782e-74 0.000291956606085587 6.74155739826525e-06 5.42594285134185e-06 1.31465266279419e-05 1.41895997834031e-07 9.14461500260405e-06 0.000431555509497365 NM_001205384.1 INO80 Bos taurus INO80 homolog (S. cerevisiae) (INO80), mRNA. 0.0 8001 100.00 0.60258152173913 NM_017553.2 INO80 Homo sapiens INO80 complex subunit (INO80), transcript variant 1, 0.0 5910 89.85 0.60258152173913 TCONS_00016823_13 sp|Q9ULG1|INO80_HUMAN INO80_HUMAN DNA helicase INO80; 0.0 1965 97.56 0.683155080213904 0 coding 1 1 1 1 -0.0108569674712592 0.919992587523383 0.0393635492863846 0.474364377358201 ATGCAGGATTTTAGTTTCCCCAAAAGGGGTTGAATCCTTCTGCATTGCAAGGATTCTTAACCACTGGACTACCAGGAAAGTCCCCAGAAAGTGTGTAGTACTTTTGCCTTTAAGCAAATTTAACTTTTCAAAGTCCAGCGAATTTGGCACAAGAAGGCTACTTACGACTTTAAGCGAATGTTGTTTTGTTTAAATGCTAAGGGCCAGAATTAAATGAATTAAAACATGAGACATGAGGGAAATGAAATAGTTAACTTTCAGTAAGTTCTTCTAATCCTTACCTGCAATTAGACTGTACACTAGGTACTTCTCATCACAGATGCTGGTAACCGAGTTGCATTAATTTTAGTAAATGTGGGCAGCAGAGGGTGCAAACTGTTGAGCTGGCACAGACAAGTCAATTACTCTCTTTTCGGAGGTTTATTGGGTGGGTGTTAGAATACTGAGACATTTCTGATGACGGGTCTGTGTATTCCCAGGTGCTTGAATCCTATAACCTTCACTTAGGTACCTTGCCCAACTGTGCCACAGCATCGCAGTTTTGCTCCCTGAGCCCAAACTGGAGCCCCAAACTACTGTGTTAAGAGTGGTCCTACAGAGCAGGGCCTTCCCCACAAAATACGACCCTGCCCAAAGGGACCAAAAACAATGTAAAATATCACACCTGAGCCTATACTTTTCCTCAAGTGAACTGAGCAGTGTTTGGTAGCCGTTAACAAACTAATCACAAGTACCCTCCCACTTCCATCTGCAGCAACAAACATTCCCAGGATCCCGGGCCGTTTGGACTGACGTTACTTCCGGGAAAAGTAACCTTTCTTTGGCGGTTGCAGATCAGGGAGGTCTCGCGACATTTGCTCCCGCGAGATCTGCTTGCTCACTCTAGCGATGACATCCTCCTCCTCCTCCCCGCCGCCTTTCGGCAATCTTCGCCAGTCCCAGCCCCAACCAATCTGCCCTCAGATGGCATGGATCAGGGTCTTCCCCTGAACCCCGGTCCGCGCGGGGCGTCAGGCGGCAGCGGCGGGGTGCGAGCTGCACGAGGCCGACGGCAGCGGCACTGCGGACGGCCACGGGCTGGCGACGAGCAGTGAGCGTGGGCGGGGCGGGGGTAAGCCCACTGAGTAGCGGCTCGATTGTTCTGGCCTGGCTATGGCGCCTCTCCTCCCCCCCGCCATGGCTCCCCGTGTCCCTGCTCCGCTCCTCTCAGTGAGTGAAAGTGGCCGCCGCCGCCGCCGGCCCAGCGCCCGCAGCCGCCTCAGCGCCGCCGCCATCTTGGGGTCCCAGGAGCCGCCGAAGGAGCGAGCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCCACGGCCTCAGAGAGCGAACCGCGGCTCCACCGTCGGCGGGGCGACCCCCCCCTCCGGACCCCGCCCGCACCCCGCCCCCCCTCCGCCGCCGCCGCGGCGGCGGGGCCCGGCGGCCCGAGCCGTGCAGTCAGAAACCCTTGTGCATGAAGACAGATTTGTTCTATGGCCTCGGAGTTGGGTGCCGGGGACGATGGCGGCTGCACTGAGCTGGCAAAGCCCCTCTACCTTCAATACCTGGAGAGGGCCCTCCGATTGGACCATTTCCTGCGACAAACATCAGCCATCTTCAACAGGAATATTTCTAGTGATGAAAGTGAAGATGGACTGGATGACAGTAATCCTCTATTGCCTCAGTCTGGAGATCCCTTGATACAAGTTAAGGAAGAACCTCCAAATTCATTGCTTGGTGAGACTTCTGGAGCAAGCACTTCTGAAATGTTAAACACATACTCATTGAATGGAGTTCTACAGTCAGAATCAAAATTTGACAAAGGGAATTTATATAACTTCTCTAAGTTGAAGAAAAGCAGAAAGTGGCTAAAGAGCATTCTGCTGAGTGATGAATCCAGTGAGGCAGATTCTCATAGTGAAGACAACGATGAAGGAGAAGAAGAAGATGATGACGAAGAGGAAGAACTCAGTCTTAGCAGAGAAGATCTTCATAATATGTTGCGACTGCACAAATATAAGAAACTTCACCAGAATAAGTATAGTAAAGAGAAGGAGTTGCAGCAATACCAATACTACAGTGCAGGGCTGCTGTCCACCTATGACCCTTTCTATGAGCAGCAGCGGCACCTTCTAGGACCCAAAAAAAAGAAATTCAAGGAAGAAAAGAAACTTAAAGCTAAGTTGAAAAAAGTGAAGAAGAAAAGGCGAAGAGATGAAGAACTTTCCTCTGAAGAATCCCCTCGTCGCCACCACCACCAGACCAAAGTCTTTGCCAAGTTCTCTCATGATGCACCTCCTCCTGGCACCAAGAAGAAGCACTTATCCATTGAGCAGCTCAATGCCCGTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGGAACTACCAAAGGCCAATAAGCAGAAAGCTTCAGCTCGTAACTTGTTTCTCACCAATAGCCGCAAGCTCGCCCACCAATGCATGAAGGAGGTGCGTCGAGCCGCCTTGCAAGCCCAAAAAAACTGTAAGGAGACTTTACCTCGTGCCCGCCGCCTCACCAAGGAAATGCTTCTATACTGGAAGAAGTATGAGAAAGTGGAGAAGGAACACCGCAAACGTGCAGAGAAGGAAGCCTTGGAGCAGCGGAAGTTGGATGAAGAAATGCGGGAGGCTAAGAGGCAACAGCGAAAACTGAACTTCCTGATCACCCAGACAGAGTTGTATGCCCATTTCATGAGTCGTAAACGAGACATGGGTCATGATGGGATCCAGGAAGAAATCTTAAGGAAACTGGAAGATAGTTCTGCACAGAGACAAATTGACATTGGCGGAGGGGTGGTAGTTAACATCACACAGGAGGATTATGATAGTAACCATTTCAAAGCCCAGGCCCTAAAGAATGCTGAAAATGCTTATCATATTCATCAGGCTCGGGGTATTAATGGCATTCTTGCAGATGAAATGGGCCTTGGTAAAACAGTACAGAGCATTGCCCTCCTGGCCCATCTGGCTGAGAGAGAGAACATTTGGGGACCTTTCTTAATAATTTCGCCTGCATCCACACTTAACAATTGGCACCAGGAGTTTACTAGATTTGTTCCTAAATTTAAGGTGCTACCATATTGGGGAAATCCTCACGACAGAAAAGTCATCAGGAGGTTTTGGAGTCAGAAGACTCTCTACACTCAGGATGCCCCCTTCCATGTGGTTATCACCAGTTACCAGCTGGTGGTACAGGATGTAAAGTATTTCCAGCGAGTCAAGTGGCAGTACATGGTATTGGATGAGGCTCAGGCACTCAAGAGTAGTTCCAGTGTTCGTTGGAAGATACTCCTGCAGTTTCAGTGTCGGAATCGGCTTTTGCTAACTGGGACCCCCATTCAGAACACCATGGCAGAGCTCTGGGCTCTGTTGCATTTCATTATGCCAACGTTATTTGATTCACATGAGGAATTTAATGAATGGTTTTCCAAGGACATTGAGAGCCATGCCGAAAACAAATCTGCCATAGATGAGAATCAACTCTCTCGCTTACACATGATATTGAAGCCATTTATGCTGAGGAGAATCAAGAAGGATGTGGAAAATGAATTGTCTGACAAGATTGAGATTCTAATGTATTGCCAACTAACCAGCCGACAGAAACTGCTGTATCAGGCACTGAAGAACAAAATTTCCATTGAAGATTTATTGCAGTCTTCTATGGGCTCTACCCAGCAAGCACAGACAACCACCAGCAGCCTCATGAATCTAGTCATGCAGTTTAGGAAGGTATGTAATCACCCAGAATTATTTGAACGACAAGAAACTTGGTCTCCATTTCATATTTCCCTAAAGCCATACCAGATTTCAAAGTTTATCTACCGTCATGGACAGATCAGGGTCTTCAACCATTCACGAGACAGGTGGTTAAGGGTTCTTCTTTCTCCATTTGCACCAGACTATATCCAACAGTCTCTCTTTCACAGAAAAGGTGTTAATGAAGAAAGCTGTTTCTCTTTCCTTCGCTTTATTGATGTATCTCCAGCTGAAATGGCAAACCTCATGCTTCAGGGACTTTTAGCCAGATGGTTAGCTCTTTTCCTGTCTCTGAAAGCCTCCTACAGGCTCCATCAGCTGCGCTCCTGGGGAGAGCCGGAAGGGGAGAGCCAGGAGAAATATCTGAGAAACAAGGATTTCCTTCTTGGGGTTAATTTTCCACTCTCCTTTCCCAACCTTTCCAGCTGCCCTTTGTTAAAGTCTCTGGTTTTCAGCAGCCACTGTAAAGCAGTGAGTGGCTACTCAGACCAGGTCATCCATCAGCGGAGATCAGCTACCTCCTCGCTTCGTTGCTGCCTGCTCACTGAGCTGCCATCTTTTTTGTGTGTGGCCAGTCCACGAGTCACCGCAGTGCCATTGGATTCTTACTGCAATGACCGAAGTGCAGAATATGAGCGGCGAGTGTTGAAGGAAGGAGGGAGCCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCAGCAGACTGGCTAAATCGACGGTCCCAGTTCTTTCCAGAACCAGCTGGAGGACTGTGGAGCATTAGGCCTCAGAATGGCTGGTCTTTCATCAGAATTCCAGGCAAGGAGAGCCTCATCACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGACATAGGGTCCTTATCTACTCCCAGATGACCAGGATGATAGACCTGCTGGAGGAATATATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCTCATCTAAGATCTCAGAGAGACGGGACATGGTTGCTGATTTTCAAACCAGAAATGACATTTTTGTGTTCCTGCTAAGTACACGAGCTGGAGGACTGGGTATCAATCTGACTGCCGCAGATACCGTGATTTTTTATGATAGCGATTGGAACCCCACTGTGGACCAGCAGGCTATGGACAGGGCCCACCGCTTGGGGCAGACAAAGCAGGTTACTGTCTACCGACTCATCTGTAAGGGCACCATTGAAGAACGCATTCTGCAGCGAGCAAAGGAGAAGAGCGAGATTCAACGGATGGTGATTTCTGGTGGAAACTTCAAACCAGATACCTTGAAACCCAAAGAGGTGGTTAGTCTTCTTCTAGACGATGAAGAGTTGGAAAAGAAATTGAGACTCCGGCAAGAAGAGAAACGACAGCAGGAGGAAACCAACCGAGTTAAAGAACGGAAGCGCAAGCGGGAAAAGTACGCAGAGAAGAAGAAAAAAGAAGATGAATTGGATGGCAAAAGGAGAAAGGAGGGTATGAACCTGGTGATCCCATTTGTTCCCTCAGCTGATAACTCCAATCTCTCTGCGGATGGGGACGACTCCTTCATCAGCGTGGACTCAGCCATGCCCAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCATACTGGCTCCATTCCCCCGGACGAGAGCAGCAGCGACATGCTGGTCATTGTGGACGACCCCGCCTCCTCAGCCCCTCAGTCCCGAGCCACCAACTCCCCTGCTTCCATGACGGGCTCTGTCTCAGACACTGTGAATGGGATTTCCATTCAGGAAATGCCAGCCGCAGGACGTGGTCATTCAGCCCGAAGCCGAGGCCGCCCTAAAGGTTCGGGAAGCACAGCCAAAGGAGCCGGAAAGGGCCGGAGCCGGAAGTCCACTGCAGGCAGTGCTGCCGCCATGGCAGGAGCCAAAGCAGGGGCTGCTGCAGCCTCTGCCGCTGCCTATGCTGCATACGGGTACAACGTGTCTAAAGGAATCTCCGCCAGCAGTCCTCTGCAGACGTCCCTTGTTCGGCCTGCTGGCCTTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCCTTGAGCTCCCCTTTAGGCAAAGGAAATAATCTTCCTGGGACTCCCAAGAGCCTCCACTTGACCAGCAGCCTAGCCCCAGACTCCCTGGTCCGGAAACAGGGCAAAGGCGCCAAGCCCTCGGGAGGACGGTAACCACCTGGCCCTCCAGCTTCCTTCAGCCACTCCGGGGGCTCATGCCCTGGCCTGCAGGTGGTCTTTGGATAGCTTGCCCAGTGCAGCATCTTCCATCCCAAGCCACGGGGCAGCAAGGACCAGTTGCAACAAGGGAAAGACAGGCAGGTGGCTGGTGTGAGGACTTGGATCATCCATGTCTCAAGAGGAATGCTCTGGGGTTGCCTGTAGGAAAAAGGCCCAAGGACAGGGATCAGGCCCACAGCCTCTCAAAGGACCTTATAGGCAAGTCTTAAACCTCACACTGGGGAAGGGCTGACAGAGACCCCATCTCGATGCTCAGGCACATAGTCTCCATCCCCATTCCACTCTTCAGCTCTGGCCGTGTCCCTTGCAAAGGCTCTAAAAGTGCTGTGAAGAGCCTTCCACGGTGGAGACTTCTCTTAGGGCTGTGATTTCCTGGGGGGCCCGGAAGGGAGGAAATCATGTAGTTGGTGTTCTCAGTTGTTGAGCAACCCAAGTCTCCAAACCCATTCACCAGAGTGTTACGGCTGAGGAGAGCAGCAAATGCAGGACCAGGTGGTGGCTTTGAGGATGGCACAAGGCTAGGGGCAGCAGGCGTGGAGGCAGTTGTTTCCCAGCATTTCCTCTCCTGCCCTGCATGGTTCGCATCAGAGAACCTTCAGGTCCCACCAGCAAAAGTAGCCGCAGCTCCCACCCCGGGACTCCCAGAAGCCAGTAAGAGACCAGGAGCCACCTCAATCAGCAGGACAGCCTCACTGCCCCTCTTGCAGGCTCCCCTTGCCCCTCCTGAATGCACAGTCTCCCCGCCCTTGCCCTTCAGCCCCCTGCTTGGCTGTATGCACTGTCTGTATTGCACTGAGAAAGGAAGGGACGGTGGAGAGAGATGGAGAGGATGGAGCAAGGGCAGGCTCAGCACCCACCTCCCAGCCTGGCCCCGCCAGCCCGAGCTCGCTTCCCTTCAGGAGCGGCAAAGGGGTGGTGTTCACATGGGAGGTGTTTCTGCCTATCCCCAGCCTGATGTCCCTGGTGGAGCAGGTGCTTCTGGGCGGGTCCGCCTCTAATTTGCACACCTGAAAATCGCGGAATTGAGTTTAGATAGATTGATTTTTTAAACTTTTTTTTTGAGTAGGGGTGGTAGGGGAATCATTTAATTTAAATCATTAAGATTCCCCTGTCCAAACCCAGACTCCTGTGTACAGATGCTATTTAGAGGGAATCAGAAAAATGCCAAGCCTTTTTTCTCTTTGAATGTGCTGTCTATTTTTATAACTGAACCTGTACATATGTATAAAGAGAGACACATCTTTCTTTTACTAACTGGAGAAAATCTTAAATAAAATGGAGTGAGATAATTTTATGTAAA EMBV3_14627 ATGCATTATCCCAGTCTGCTCCTTGTCAGTGGGCTCAGGAAGTCAAGATATGGCTTCTCC Gene BVT0102_032596 + 0 NULL GK000012.2:16242342-16255778 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036296 TCONS_00036297 TCONS_00036294 TCONS_00036299 TCONS_00036292 TCONS_00036293 TCONS_00036295 TCONS_00036298 1 XLOC_021123 Coding TCONS_00036296 XLOC_021123 Coding Coding LCP1 12:16253900-16265341 j TSS26456 2501 1 TCONS_00036296_1 127 0.123150739704118 4 0.781730769230769 0.00137952677882002 0.000896353009193746 0.00129070687552698 0.000990882439287939 0.000319611180834721 7.39392043060603e-05 0.000118475595885014 0.0011641724039461 0.00134105548398851 0.000208166311468295 1.52954581259169e-09 2.86988040021811e-05 2.18296317176124e-11 0.000161375494320501 0.000185746243939396 7.18481245752055e-17 0 3.40289757870789e-23 0.000957014912136899 0.00158821090523498 0.000106860076953374 9.99897043720036e-14 1.04050690914213e-08 2.07168269875468e-08 0.00113012636021967 0.000513703695878059 0.000710500408510072 4.83655654309707e-12 5.99871158476024e-09 1.04375667755597e-10 XM_005213674.1 LCP1 PREDICTED: Bos taurus lymphocyte cytosolic protein 1 (L-plastin) (LCP1), transcript variant X1, mRNA. 0.0 4314 100.00 0.956017592962815 XM_005266373.1 LCP1 PREDICTED: Homo sapiens lymphocyte cytosolic protein 1 (L-plastin) (LCP1), transcript variant X1, mRNA. 0.0 724 72.54 0.546181527389044 TCONS_00036296_1 sp|Q61233|PLSL_MOUSE PLSL_MOUSE Plastin-2; 2e-75 239 92.86 0.984251968503937 1 coding 0 0 0 0 -0.382924826719109 0.258809129707701 -0.000271488411734799 0.995499884664565 GGGTCATTACTCCTTTTTCAGAGATAACACTTGAAAGCTGTGTGGGAGATCATGAAGGCCGGTGTTTTCCACAGAAGCGTTAACTGGAGGAAGACACCCGATGGGTTATGTACACGTTGAATATTCTTGAAGACATTGGAGGCGGGCAGAAGGTCAATGATGACACTATTGTCAGCTGGGTGAATGAAACACTGAAGGAAGCGGAGAAGAATTCATGCATCTCTAGTTTCAAGGACCCGAAGATCAGCACAAGTCTGCCGGTCCTTGATCTCATCGATGCCATTCAGCCAGGTTCCATTAACTATGACCTTCTGAAGACGGAGAACCTGAATGAAGAAGAGAAACTCAACAACGCAAAGTATGCCATCTCTATGGCCCGAAAAATTGGAGCGAGAGTGTATGCGCTTCCAGAAGACTTGGTGGAAGTGAACCCCAAGATGGTCATGACCGTGTTCGCTTGCCTCATGGGGAAAGGAATGAAGAGGGTGTAAGGCCCAGTGGGCGGGGTAGGGGGTGTGTGTGGGTCTCTGGCTGCTCATGCCTGGTGCCCCCGGGAAACACGGGAGGAGTCAGCCATTCCAAAATTTCAACTCGATGACATTATTCACAGTTCCAAAAAAAAATGTATATCTGTTCCGCCAAGTAGCCTTCATGTATTTAACAAAAAGTGCTTTATTCTTTGCAAAAGACCCAGTCTCTTACAAATATTTTTTTTATCATTGAATTGATTGCTTCTTTGAAAACGTAGAGAAAAAGAGATCTTACTTCCCAGGCACCTTTCCTGCCTTTGCCGTTGTAGTCAGGTATAGAAGTCTCAAGTGTAGTTCATTTTAACATAATCTTTCAAACCAGCTTACATTGTCTGCCTTCTTGTTCGGGGTGAGAACCAGGAGGGGAGAATCATGGGAGGGGAGAATCGTGAAACCAGCCTAAAGCTGGCTTCTGGAGGCCAGCGTTTGCTCTGTTACAAGCCTCCTTCCTGTTGCCCTTCTACCTGGGTCTACCTGTTGTGACTTGCTCTCCACCCCGGCAGAACCTGCCCTCTCTGTGGCTCCCCTCTGCTGGCCACCCTCCTCTTGGGCCTTCTGGGTCATCTGACAAATCAGGCTGTATTGGGGTCCCCAAGAGTGTCTGGTAACCTCCAGACCTAAGACATATCATCAGAACATTTTCTTAGAACTGTGTTTACTAATCTCCAGAACGAAGACTTATCATCAGAACATTTTCTCAAAACTAGGGTCCCAGATGTCATCAGATTTTATTTTTTCAGTCAATGAGAAGCCCTCTGTTTTTAACCCTAGGATCTGGGCTCTGACCAGATCTACTATCTTAAATACCATGCCTTCAGATAGATTCTTAACTGTTGGTGGAAGGAAGCGTTCAAGGAGGGGGTCATTGAGCAGCAAACCACTAGAGGGCAGTGTGGAGTCATAACAAAGTTTCTGGTCTCAGGTGCTGCCTCTGTGCATTTAGCCCTGTGTATTATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGCAGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTCGGACATGACTGAAGCGACTTAGCAGCAGCAGCAGCATTAGATCTTGGAGAAGGAAACAGCAGCCCAGTCCAGTATTCTTGCCTGGAGAATTCGATGGACAGAGGAGCCTGGCGGGCTACAGTCCATGGGGTCGCACAGAGTCAGACACAACTGCGTGACTAATGTTTTATTAGATCTAGTTATACAGTGTGGCTAAATATCTGGCGACTGGGAACTGCTTGTTCTGATTTCATTAGCTCTTAGATCATAGTGCATATGATGTCTGCCGGGCCATAGGATCATGTTTACTTTTTTGGTACCCCCAAATGCCCAGGGGTCATATGTGCCAATGAACAGTGCCCCCACCTCAACCCCAAACTTGACCCCCACCAACACACTCACATATACACATACCTAGCCAGGTATCAAGCTGGCTAGGAACAGGCACAGTCGCTTTATGAAGAGTTAATTTACTGGATATTTAAAGAATTCTTAAACAAAACCCAAGGAACACTGTACTCTTGAGCAGTTCTAATAGCCTGCAATTTCCTTGAAAACTTACCAAAGGCTAAATAGCAACAGAGCATTGGGCACTGATGCCAGACCCCTTCTGTCATGGTGAACGTGTTCATGGAGGAGGTATCTGCTTTAGGGGTGGTGTGTAGTGGAACTTAGTCATTTTTCAAAGAGACTGAAATGCATTATCCCAGTCTGCTCCTTGTCAGTGGGCTCAGGAAGCCAAGATATGGCTTCTCCTAGCCCATAATCTGTATTTCTAATGCATTTGATTGCAAAGTGGTTGGCTTTGTCTTAATCTGCACTTAATGTAGCCCCCAGACGATTCTCCCCCCCGTCTGCCTCCAGGGGGAATGTTATTGCCTTAATGGAAAATGAAGATAAAATAATGCTCAATCAAGATCTCTCCAAATAAAATGTTCCCCATATCGGACG EMBV3_01516 GCCCGTTGCCCAAGATTAGGGTCCAAGAGCTGGTGAGGAAGCCTGATTAAGATGCTAAGA Gene BVT0102_007005 + 0 NULL GK000025.2:6686817-7515965 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146105 TCONS_00144413 TCONS_00146106 TCONS_00146111 TCONS_00146107 TCONS_00146104 TCONS_00146110 TCONS_00146109 TCONS_00146108 2 XLOC_089023 XLOC_088559 NonCoding TCONS_00146109 XLOC_089023 NonCoding NonCoding - 25:6804795-6810212 - TSS109335 1600 2 TCONS_00146109_1 96 0.398125 2 0.704948301329394 0.000100785666572115 5.0893166870364e-71 0.000545718587966294 0.000545253594069438 2.10221878750692e-26 7.17028333624078e-31 8.12227358272164e-10 0.000394435418159605 0.00108170624628203 0 0 3.16130335618078e-05 2.0568022873419e-05 0.000137192214408661 5.03331209194373e-16 0 0 0 0.000164221934271246 5.62533773232201e-20 1.03188116422491e-62 0 0 4.1907822321613e-05 0.000686136798793137 0.000172397558743347 0.000972662148177951 0 0 0 0 noncoding 1 1 1 1 0.021586020872454 0.882659480084414 -0.113746216074154 0.0628427648581052 CTCAGAACCACCAGCTTAAAAAGAAAAATCTCAGCAGGACAAGTCAGCCGAGTGCTGCTTGATCCACACAAACCAAGAGAGCAGAGGGATGCAGATGGAAGACATTCCCGTAGACAAGACAAGAATGAAGACCTTCCTGGATGATACACCATCTGATTCTCCTACATCTCCTCAGTGACTTATGCAACACTGTTGGAGGAAAACATGACTTACCATCTCAGCTCCATCTCATTTTCTGGGCAAAGGTCCAAGGTCTGAGTGTCCTCATATGTAAAACGGAGCAAATGCATTACTTGCTGATGAAACAGGTCATCAACAGGAGGAGACTGCTGGCTGGCCCACGGAGTGGACCCCGGCAATCAGCAATCAGAGGGTCCCTACCCTTTCCTCTGTCCTTGAAGGATACTTCCTGTCCACCGTTCCTGCAGTAGGAGCTGCTCCAAGAATGTAGCCTTGAGAAAGCGAGGTGTTCAGATCACCTGGACCGGATATGAGCCTAAACCAAGTGATGGTGTCCGTATAAACTAAGATTCCAGCGGGCAGGTGCCGAGATCTCTCTGTCTTATGGCCTCTCAAGACCAGCCTCATAATTAAGTTGCTTCACTTATTAAAACCGCCACCTGCCGGCCAGGAGGGGTTTACCTCGCTCTGGGGTCTCTTCTTGTGCTCTGTGTTCCTGGCGGTTTGCAAAGCAAAGTGTGGCAAGCCATCCTGGAGACTGAAGTAATGGTTCTTGGGAAAGAGGCATTCGCAGAAGGGAAATCCCGGGCTGGCCATCGACCCCTGCGTGGGGAGAGGTGTCCTGAATGTCAGATGCGTGCAGACAGTTGCTGGAGTACAGGACGCCCCCAACATGCTGGCTGGTCCGATGCGCGTGTCTGCAGAGCCGCCCAGAGGGCGCTGCAGGCGGAGAAGCAAATCCCGGACGCACAGCCGGCTGACTTCCTCTTGGGGTGGAAGAGGCTGATGGCTGAAGTTTAAGTTAGAAAATGGGAAGAACTGGGGTCAGAGAAAAACTGCAGAGTCGCCTGTTCTGTTCATCCCGGGGCCGGCAGACAATCTGGGGGAACTGGATGGTTAAGAGACCTCGGAGAGGCCTTTTACAAAGCGAGGAGGGCGCCCGTTGCCCAAGATTAGGGTCCAAGAGCTGGTGAGGAAGCCTGATTAAGATGCTAAGAGGTGGGATCGCTAGTAAAGAGGAGGTCTTGGAGAGGATGAGATCTCAGTCTGACCCCCGAGCTGAACCGCGGCAGGCCCCAGGCAATTTGAAGCTCCTCTGTCCTTGAAATGTACATTCCGCCCACTGTTTTCATATTGGAAGCTTTGCCCTGATGTATCTTTGAGAGAGTGAAGAGTTGAGCCTGTCTGGACAGGGTATCTGTTAAAACTAAGATTCTGGCAGACAGATGCCTGGATCTATTCATCTTAGAGCTGCCCAAGACAAATTTGTAGGTAAATCTATAAATCCCCACTCAGAAGAACATGAATTATCAGATGCTTGAATGAAATGAAGACAAAAACAAGCTTGAATATTTAAAACTTACAGCAAGTATCTTCCATGATAGATCCTTTCAGACTCCCACTCATTTTTTTCTTTGAT TCONS_00144401 TCONS_00144402 TCONS_00144403 TCONS_00144404 TCONS_00144405 TCONS_00144406 TCONS_00144407 r 3' 117914 TCONS_00144401 TCONS_00144402 TCONS_00144403 TCONS_00144404 TCONS_00144405 TCONS_00144406 TCONS_00144407 r 3' 118061 EMBV3_36356 CAGAACCATAGTTTAGAGCCTGTCCTCATATCCAGCACATTGGCGATGTTACAGAGGAGG Gene GeneID:518313|KIAA1324L:NM_001046238:23_cdna Constitutive 1 NULL GeneID:518313 4 GENE KIAA1324L MGC137390 UPF0577 protein KIAA1324-like EMBV3_05202 TCTGTGCCTTTGGGTTGGATACCTGCCCCACCTGCTTCTGTTCACCTTTCTTGTGGTCAA Gene GeneID:533372|ADCK1:NM_001076895:114_cdna Constitutive 1 NULL GeneID:533372 10 GENE ADCK1 MGC142877 aarF domain containing kinase 1 EMBV3_36323 ATCTGTCCGTGCCATACTTGATATGGATTGTCTACCTTACGGGTGGGAGGCAGCTTACAC Gene GeneID:537963|STXBP4:XM_002695548:34_cdna Constitutive 0 NULL GeneID:537963 19 GENE STXBP4 NULL syntaxin binding protein 4 EMBV3_22908 ACCTGCCAAGGAATCCCCTTCATAGCCCGCTGGAAAATTTGCTAAATATCTGACCGGTGC Gene BVT0102_128974 - 1 EMBV3_09589 GK000023.2:43649505-44010441 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140494 TCONS_00179596 TCONS_00118448 TCONS_00056480 TCONS_00171161 TCONS_00221595 TCONS_00010615 TCONS_00088693 TCONS_00098385 TCONS_00107397 TCONS_00090417 TCONS_00154811 TCONS_00140493 TCONS_00180380 TCONS_00187740 TCONS_00099835 TCONS_00199297 TCONS_00174545 TCONS_00226267 TCONS_00029929 TCONS_00252175 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00073417 TCONS_00000314 TCONS_00056222 TCONS_00136880 TCONS_00137851 TCONS_00132257 TCONS_00222044 TCONS_00174540 TCONS_00169645 TCONS_00174543 TCONS_00154809 TCONS_00226268 TCONS_00132044 TCONS_00154810 TCONS_00117782 TCONS_00171162 TCONS_00150268 TCONS_00161883 TCONS_00174544 TCONS_00174546 TCONS_00110376 TCONS_00102425 TCONS_00238548 TCONS_00110362 TCONS_00130398 TCONS_00154812 38 XLOC_085141 XLOC_109368 XLOC_072614 XLOC_034283 XLOC_103753 XLOC_134909 XLOC_006166 XLOC_053479 XLOC_058631 XLOC_063307 XLOC_055198 XLOC_094549 XLOC_110148 XLOC_113785 XLOC_060078 XLOC_120950 XLOC_104638 XLOC_137960 XLOC_016184 XLOC_155116 XLOC_123974 XLOC_045182 XLOC_000088 XLOC_034025 XLOC_083091 XLOC_084060 XLOC_080738 XLOC_135353 XLOC_103408 XLOC_080693 XLOC_071948 XLOC_091840 XLOC_098768 XLOC_066280 XLOC_061863 XLOC_145215 XLOC_066266 XLOC_079107 Coding TCONS_00179596 XLOC_109368 Coding Coding - 3:99968921-99976242 - TSS134355 7321 2 TCONS_00179596_16 405 0.995082638983745 1 0 2.2899730733807e-05 2.87794733106343e-05 1.46660483268652e-06 6.61670287463767e-07 1.53646147036544e-06 6.28636240086872e-07 5.72528955562941e-06 1.21959670911563e-05 5.74881503638329e-06 0.000780002652451121 0.000524875399509416 0.000765542978596544 0.000139250951259028 0.000374871407518322 4.26007064693583e-05 0.00240846066750101 0.00195592431671475 0.00489058798563395 1.09503770484616e-05 4.87551939026511e-06 1.22570456212253e-06 0.0026724491859505 0.0033515583835469 0.00270820785064512 1.27136386568317e-06 4.52394845141639e-06 5.25248538403041e-06 0.00182989328022288 0.0018967866127545 0.0033944148952754 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2479 90.46 0.246414424258981 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 6e-08 66.2 69.48 0.0208987843190821 TCONS_00179596_12 sp|Q99315|YG31B_YEAST YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; 2e-25 110 28.41 0.723287671232877 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACACATAAAAGGAAGAGCCAAAGCGCTCTCATGGACTCTCTCTCCTGCGTTCATGCGCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGCTTAAGAGCTGTAGCATGGTTCCAAGACCCAAGAGCTGTGATGCGCTGAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCGAGGAACATACACTCGTGTGACATCTATGGTGCCGTGACTCGGGTTTAACCTGGCTGAAACAACCTTTGCGCAGAAGAGGCCAAGCACAGCAGGAGCCCAACTCAGCAAAACTCCCGCACTAGAAGTGGAAAGCGAAGAAACCCAGCGCAGGGGAAGGCCCATCGTGCTGGAAACTGGGACAGTGAAAATAGAACTCAGCAGAAAGCTCACGTGGCCCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGTAAGAGGTCCTTGCTCCTATGGCTGGAGGGACCTTTACAATCTCTCATTTCTTGTTTCCTCAAACCTCCCACAAACAGGCAGGCAGCAGGGGAACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCGCTATCTGCTGAGCCCCAGTAGCTGTTACACAAGCCGGTGGGGGTTCTTCTGTCCTTTATCCTGTGCCAAGGATCAGACCAATAAAATTATGAGGACCGGTCAGATATTTAGCAAATCTTCCAGTGGGCTATGAAGGGGATTCCTTGGCACGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCCAGGACTCAAGCCTGGCTAAAACTAATGAAACTCAGGCTCTGATGTCTCATTGCAAAAATTCATTGAGAGACAAAGCGATAAGAGGTAAATTTGTTAGGATCCAGAGAGAAGCCACCCTTCAGGGTGTGAACTGTTGGCAAGGTCAAGGGCTGGGGCCATGGAATTAGGCCGGGCTAGGTTTTGTGAGGGGATGGAATTCATATGCTAATAAGTGAGAGGACCATCCCAGCCATTGGGGAACCACCCACTCATCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTAGGTGTGTCTGTTGGCTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACACTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCTCTTCCCTCCTGTTTCATGCTCTTTTCCTGATCCCCATCCAGACCCACAAGCCTGCCTCTACAATCTTCTGGAGAGACAACCAGAAAATAGCTGGCCTTGGGAGGGAAATACTCTATAATATCCAACCCCCTAATCCTACCCAATACTGGTCACACTGGAGATCTTGGGGATGCCCAAACTCCAGTCCGGGGGGGTCCCAGGAGGTCATCACACCTTGACCTGCCTAGAGATCAGTCTTCGAAAGGTTGTCACACCTTAACCTGTTGGGGATCCTCTAGTCCGAGGGGTCCCATGAGGTCGTCACGCCTCGACCTGCCCAGGGACCCAATTCTCGGGAGGCCATCACGCCTCGACCTGCCCGGGGATTTGATCTCTAGGAGGCTGTCACGCCTCAGCCTGCCTGGGGATCTACACCCTGACCCAGGGACACCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAAAAGATTCACCCCTAAGGAAGTCCACCCATGGAAACATAAAGAAACCTATTACTCGTGGGACTGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCATTGCCTTTCTGGAGAGGTTAAAAGAGGCACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTATGAGGGACGGGTGATTTTAAAGGATAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGACAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAAAAAGAGACAAGGCATGCTCAGATGCTGGCCGCCCTCCAGAAAAGCCCTATGGCAAACCCAGAGTCCTTGAAGGACAAGGCACAAGACAAATGCCTAATCTATAGACAGGCAGGGCATTGGGCCAAAGAGTGTCCAAACCGTGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGCAGCACTCTGCCCTGGGGACCCAAGAGCCTCAAGGTCAAGAGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGTGGCCTGCTCCAGCCAGCCCGCCAGTCACAGATAACCATCACGGGGCTGGAGCCAAGAGTGCACCTAGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCGGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTCCAGGAAAAGCAACTACTAAAAGATTGACCTGAGCACTTCTTTGTTGCTGGGATGGACAAATTTTCCCATCAGTTTCTGGTGGTCCCTGAGTGTCCTACTCCCTTACTGGGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTTCAGCCCCTAGAGCTCTACAGCTCCTGGTTACTACTGAAGAATCCATTACACCTTCAATAGAGAGGGGCCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGCCCACCAAGCTGAACCAGTCATCATTATCCTCCGAGACCCTACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGGCTCAGGAGGGACTACAGCCTTTAATAAATAAATTCCTTGTTTGTGGGCTATTGGTCCCCACCAGTTCGCCATGTAACACCCCAATCCTCTCAGTAAAGAAAACAGACAGAACCTGGCGAATGGTTCAAGATCTCTGGATCATAAATGAAGCTGTAGTCCCCCTCTATCCCACAGTACCCAATCCCTACGTAATCTTGGGAGAAATCCCACCCAGTGCCAAGTGGTTTACAGTCTTGGATCTCAAAGATGCATTTTTTTGCATACTACTGGCTAAAGAATCCCAATATCGTTTTGCCTTTGAGTGGGAAGCCCCAGGAGAAAAACACCAACAGATGACTTGGACGGTATTACTTCAGGGGTTCAGAGATAGCCCCCACCTGTTTGGAAAGGCCCTTAGCCAGGATCTCCTAGATCTGGACCTGGGACCTAATGGGAAAATATTACAATACGTAGATGACCTACTAATCTGCTCTCCAGATGAGAAAAGTGCCCAACAACATGCAATTCAGGTTCTAAACTTCTTGGCAGAAAGGGGATATAAAGTCTCCCGTGCTAAGGTACAGATGGTCGAGACAAAGGTCACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCAAAAACAATTGCGAGCTTTCCTGGGGCTAACTGGTTATTGTAGAATCTGGATACCCAACTATGGTCTAATTGCCCAGCCTTTATATGAAAGCTTAAAGGGATGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGCCTTAACTCAGGCACCTGCCTTGAGGTTGCCAGACCCAGAAAAAGCATTCCAACTTTGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGTCTGTAGCTTACTTATTCAAGAGGCTCGATCCAACTTCCCAAGGTTGGCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAGATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATTGGAGAGGCCATTTATGGATGTCTGATCAAAGAATTCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCCACCCTCCTGCCTACCCCCGAGGGCTCTCTCCCCTTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCTGAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCAGGTATGCAGTAGTCTCCAATTTTGAGACCACAGAGGCTAGGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAACTCATAGCCCTGACTCGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATATCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCCGAGGGTCCCCAATCAAATATGGTGATCAGATTCTTCAACTCTTGGAGGCAGTCCATCTGCCCACTGAGATTTTCAGTCTCCCACTGCAAAAGACACCAAAAAGGGAGCAGGGAAGTGACACGAGGGAACCAAGCAGCTGATCAGGCAGCTAGGAGAGCAGCATTAAGAGACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTCAAGAAGATCATATCGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCTTCCAAATATTACTAGAAAGGTCCTTCAGAGGAACAGGCGTCCAAACAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAACAACCCCCAAGGAGCTCGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACATGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGGGTATAAATACCTATTAGTTATGACATATACATTCACAGGATGGATTGAAGGCTTTCCCACCCAGACTGAGAAGGCTAAGGAGGTGGTAAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCTAGGTCATTACAAAGTGACAATGGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGTATCGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAAGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGGAAGGAGGCTTTACCAATAGCTCTCCTCTGCACCCGCATTGCCTCTGAGGAACAGGTTGGTCTTAGTCCTTATGATATGCTATATGGGAGACCTTTTGTTTATGTCAATGACCTCTTCCTAGATCCAGAGGTTCAGACCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACACTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGGACTCAAGTCCTAGCCCACATGGAAGGGCCCCTACCCTGTAATACCTTCTACCCCCACAGCAGTCAAGGTACCAGGACATGACTCCTGGATTCACTACTCATGAGTCAAGCCATAGAAGAAAACAGAAGAGGACACTCAATACACCTGTGAGCCCCTGGGAGATCTCAGACACCTATTCAGAACTACCAGTGAGTGCCTTCTAATGAACACCCCCAAAATCTGGTTTCTGGGTATAAAATTTCTCAGGATAACCCTAAAGAGCCAACACAGCTTGACAGATACTGTACTCCAAAACAGAGAGGAGATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCCATCCTGGCCATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCCATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCAACAAAGATACAAAACTACAACTGACCACGGAAAATATCACACACCCTTGGACACTGCTATAAGGACTCTGAGGATTGAGACTAGCAAGAAGGGGAGGCCCAATACCCCTCGCCATCCCAGTTCAGCAGAAAGTAGCCAGAAAGACCTCGATGCCCCTATTCCCAAAGAATTGGGCCTCCCATTTCTTGAGGGGGGAATATTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGCGGTGGCTAAAAGACAAGGAAGGTCCAAGGACCAGAGTGAAGACTTCAGGTAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATTAAAAGGAAGAGCCAAAGTGCTTTCTCATGGACTCTCTCTCCTGCGTGTGTGCGCTCTTCCTCTCTTTCTCTCTCTCTCTCCTGCTATCTTCTAAATAAAATACAGCTGTAACACTGATTTACTTAAGAGCTGTAGCATGGTTTGTCCAAGACCCAAGAGCTGTGACGTGCCAAGGGCTTTAATGTCTGTCGCTCCAAATCTTTGTTGTGACAAGACAAAGAACCGAGGAACATACACTCGCGTGACAGTAGGAAAGTAGGATACATGTTTTGAGTAAAAAAGGATTTTTATGCATGGCTGGGCTGAGATTAGGTTAAACTTATTCAGGTAAATGGATTTTGTTATTAAAAGTAGACTGGTGCAGGACTAGATTTGGTTCCTCTATTCTAAGAGAACATGTTTACTTAGAATGCTGCTTTTGATAAGATTGTATGAACTTGCCTTTAAGTGATCTGTATTTGTTTTTAAATAGTCACAGTGACCTATGATTCTATCTGACCAAATATTTTTAAAACTTTTTGATATTTTTTATGCACTTCCTATCAAATTCTAATTAAAGTTCTTTTGACTTCAGCTAGCTTGGAGATGCTTCAGAGGGCCCTTCAGAAAAAAATTTAATATAATTTAAAACTACATATATTCATATTAAACTGGCTAGAATTGGTTGATATGTTAAATTACACAGAAGTCAGTGAATGATCAGCCTCCTCAGATTATATGTTATGAATAAATTTTATTAATACAGACATTCTAGAAACTA TCONS_00174208 . 5' 11514 TCONS_00174208 . 5' 11514 EMBV3_02807 TGGTGGAGGAAACCTGTCATTTCTTTCTCACGTGCGTTTGAAATACCAAGTGAATAATAC Gene GeneID:781665|IRF2BP2:XM_002698810:39_cdna Constitutive 2 NULL GeneID:781665 28 GENE IRF2BP2 NULL interferon regulatory factor 2 binding protein 2 EMBV3_36332 GTAAACTTACCCTTCTGTGGCCCAAATGTGTTGGACAGCTTTTACTGTGACCTTCCTCGG Gene GeneID:788797|LOC788797:XM_002690715:377_cdna Constitutive 0 NULL GeneID:788797 10 GENE LOC788797 NULL similar to olfactory receptor 1306 EMBV3_12662 ATGATCTCTACCCCAAGATCTACCACAGTTGCTTCTTCATCGTCACCTACCTGGCCCCGC Gene GeneID:282248|HCRTR1:NM_001048182:43_cdna Constitutive 0 NULL GeneID:282248 2 GENE HCRTR1 NULL hypocretin (orexin) receptor 1 EMBV3_25027 GAAGCAATGCTTGAGGCTCCTTACAAGAAGGAGGAAAAAAAGCAAGAGCAGAAGTCGTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13387 AGGATATCTTCACAATCCCGATGAGACAGCAGAACTGGCGCTGAACTTATGGTCGTGGCA Gene GeneID:505575|TMC6:NM_001075208:353_cdna Constitutive 0 NULL GeneID:505575 19 GENE TMC6 MGC139990 transmembrane channel-like 6 EMBV3_02500 GTTACAACACTGCCTTTAGTCAGACGTGCCTCCAGCACTTCACTGTTCCCTGCAAAAGAC Gene BVT0102_175911 + 1 EMBV3_10061 GK000022.2:17735890-17817625 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15118 CCCCCAGCAGCAGTTTTGGCCTTCTATCCTGAACCGCTTGCCAGGGCTGCTGATTTTTAA Gene GeneID:100139987|LOC100139987:XM_002694337:71_cdna Constitutive 0 NULL GeneID:100139987 17 GENE LOC100139987 NULL hypothetical protein LOC100139987 EMBV3_13487 TGTGAGGGGTGTGTCCCTGTGCTATTTCCCTGGTAACTGATGAGCCACCTGACTTCAGTT Gene BVV0102_134270 + 0 NULL GK000030.2:135430738-135436137 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42313 TTGTGGTGTATGTTCAGAAGCCAAGCACCCTTGGAATTTGCTAGCTTTGCAGAACTCTAC Gene GeneID:519597|SNX4:NM_001080281:65_cdna UTR3_Alt 2 NULL GeneID:519597 1 GENE SNX4 MGC152099 sorting nexin 4 EMBV3_00435 ACGTGTTGAAGCCGTGCTGGCTCTCGTCTCTTCTCAAGCATCAAGTACTCGGCTGTCTGG Gene GeneID:515001|NAT10:NM_001098031:42_cdna Constitutive 0 NULL GeneID:515001 15 GENE NAT10 MGC148591 N-acetyltransferase 10 (GCN5-related) EMBV3_15353 TCAGAGAAGTGGCAGTACATTCGGCTGATGAGATTTTGAGCAGCACCATCAAATCTTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29270 GGGCCCTTTGCCAATAGATAGTAATTCAATCTGGTATTGATCTTTTCACAAACAACCAAG Gene GeneID:520472|NAMPT:XM_002686767:70_cdna Constitutive 0 NULL GeneID:520472 4 GENE NAMPT PBEF1 nicotinamide phosphoribosyltransferase EMBV3_34653 GATCATACACCATGACCAAGTGAGCTTTATCCCAGGGATGCAAGGATTCTTCAATATCAG Gene BVV0102_074633 + 0 NULL GK000005.2:100586413-100621342 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007479 TCONS_00240570 TCONS_00152751 TCONS_00250526 TCONS_00116668 TCONS_00124122 TCONS_00238892 TCONS_00233446 TCONS_00174964 TCONS_00071338 TCONS_00152649 TCONS_00224115 TCONS_00032585 TCONS_00177993 TCONS_00048823 TCONS_00021453 TCONS_00107167 TCONS_00135549 TCONS_00115689 TCONS_00135527 TCONS_00249014 TCONS_00254141 TCONS_00250727 TCONS_00116119 TCONS_00110347 TCONS_00253076 TCONS_00065227 TCONS_00021578 TCONS_00250238 TCONS_00251888 TCONS_00208718 TCONS_00207091 TCONS_00020842 TCONS_00223458 TCONS_00175068 TCONS_00098382 TCONS_00242132 TCONS_00254568 TCONS_00031044 TCONS_00007556 TCONS_00240622 TCONS_00152716 TCONS_00162777 TCONS_00251955 TCONS_00231833 TCONS_00117117 TCONS_00110459 TCONS_00218764 TCONS_00157711 TCONS_00141423 TCONS_00152745 TCONS_00136862 TCONS_00031912 TCONS_00031937 TCONS_00179125 TCONS_00186815 TCONS_00098713 TCONS_00251853 TCONS_00124128 TCONS_00185929 TCONS_00238441 TCONS_00135700 TCONS_00020398 TCONS_00249138 TCONS_00020725 TCONS_00073275 TCONS_00249031 TCONS_00240473 TCONS_00218860 TCONS_00250529 TCONS_00251931 TCONS_00040338 TCONS_00200213 TCONS_00022063 TCONS_00032700 TCONS_00021597 TCONS_00233374 TCONS_00206425 TCONS_00040696 TCONS_00156738 TCONS_00047020 TCONS_00208725 TCONS_00207276 TCONS_00206407 TCONS_00142125 TCONS_00190151 TCONS_00111564 TCONS_00115730 TCONS_00071042 TCONS_00130587 TCONS_00071432 91 XLOC_003040 XLOC_147234 XLOC_092516 XLOC_153469 XLOC_070834 XLOC_075674 XLOC_145558 XLOC_142928 XLOC_104747 XLOC_043109 XLOC_092414 XLOC_137411 XLOC_018825 XLOC_107766 XLOC_028954 XLOC_012126 XLOC_063078 XLOC_081772 XLOC_069858 XLOC_081750 XLOC_151957 XLOC_157079 XLOC_153670 XLOC_070288 XLOC_066251 XLOC_156017 XLOC_039949 XLOC_012251 XLOC_153181 XLOC_154829 XLOC_127231 XLOC_125610 XLOC_011517 XLOC_136758 XLOC_104851 XLOC_058628 XLOC_148796 XLOC_157500 XLOC_017293 XLOC_003117 XLOC_147286 XLOC_092481 XLOC_099658 XLOC_154896 XLOC_141321 XLOC_071283 XLOC_066363 XLOC_132083 XLOC_096166 XLOC_085851 XLOC_092510 XLOC_083073 XLOC_018157 XLOC_018182 XLOC_108898 XLOC_112866 XLOC_058957 XLOC_154794 XLOC_075680 XLOC_111982 XLOC_145108 XLOC_081923 XLOC_011075 XLOC_152081 XLOC_011400 XLOC_045040 XLOC_151974 XLOC_147137 XLOC_132179 XLOC_153472 XLOC_154872 XLOC_024154 XLOC_121865 XLOC_012734 XLOC_018938 XLOC_012270 XLOC_142856 XLOC_124947 XLOC_024512 XLOC_095198 XLOC_027157 XLOC_127237 XLOC_125794 XLOC_124929 XLOC_086550 XLOC_116186 XLOC_067464 XLOC_069899 XLOC_042815 XLOC_079295 XLOC_043203 Coding TCONS_00250529 XLOC_153472 NonCoding NonCoding - X:42049161-42049949 - TSS187750 788 2 TCONS_00250529_3 84 0.998730964467005 1 0 1.23329418163439e-06 2.12531113965679e-06 0 0 6.26545040596956e-07 0 0 0 6.67523325166044e-06 4.35119628198308e-06 2.42088161611916e-07 1.90482584342807e-06 0 0 6.22613039246579e-06 0.000101059326334391 0.00420368112349935 3.4494691549136e-05 0 2.01536441530632e-05 0 5.34043566966198e-06 8.47939890028698e-05 4.80296153052119e-05 0 0 1.85886414756489e-06 6.0946592308444e-06 3.69640008818258e-06 0 NM_001206364.1 SLAMF6 Bos taurus SLAM family member 6 (SLAMF6), mRNA. 6e-53 212 83.17 0.253807106598985 NR_047679.1 UGDH-AS1 Homo sapiens UGDH antisense RNA 1 (UGDH-AS1), non-coding RNA. 5e-111 405 76.51 0.700507614213198 0 noncoding ATTTCTGTGTGTTGATTTTATATCCTGCAACTTTACTATATTCATTGATTAGCTCTAGTAATTTTCTGGTGGAGTCTTTAGGGTTTTCTATGTAGAGGATCATGTCATCTGTAAACAGAGTTTTTTCTTTTCCAATTTAGATTCCTTTTATTTCTTTTTCTGCTCTGATTGCTGTGCCCAGAACTTCCAAAACTATGTTGAATAGTAGTGGTGAAAGAGGGCACCCTTGTCTTTTTCCTGACTTTAGAAGAAATGCTTTCAATTTTTCACCATTGAGGATAACGTTTGCTGTGGGTTTGTCATATATAGCTTTTATTATGTTGAGGTATGTTCCTTCTATTCCTGCTTTCTGGAGAGTTTTTATCATAAATGGATGTTGAATTTTGTCAAGGCTTTCTCTGCATCTATTGAGATAATCATATGGTTTTTATTTTTCAATTTGTTAATGTGGTGTATTACATTGACTGATTTGCAGATATTGAAGAATCCTTGCATCCCTGGGATAAAGCCCACTTGGTCATGGTGTATGATCTTTTTAATGTGCTGTTGGATTCTTTTTTTTTTTTTTTTGTATTCCTATTTTTTTTTTTTATTTTTTATTATTTTTTTTTTGGATTCTGATTGCTAGAATTTTGTTAAGGATTTTTGCATCTATGTTCATCAGTGATATTGGCCTGTAGTTTTCTTTTTTTGTAGCATCTTTGTCAGGTTTTGGTATTAGGGTGATTGTGGCCTCATAGAATGAGTTTGGAAGTTTACTTTCCTCTGCAATTTTCTGGAAGATTTTG TCONS_00244277 . 3' 38144 TCONS_00244277 . 3' 38931 EMBV3_03193 GCCCTCTTCTCTTTCAGAGTAAAGTGGTTGACCACCGGCGACACTCAGACCTCCTCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27307 GAGACCTGAGCCTGAGCTCCAGCCTGCTCACTTCCTGCAGGTGCTCAACAGAGATGGTGA Gene BVV0102_092584 + 0 NULL GK000022.2:677105-701103 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14171 GTTCCACGCGCTCCACAAGCGGATCAAGAAACTGGCCCACAGACCCCAAGGCCAGCAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09660 CATAGTATGAGAGGCTGGGAGCAATGACTATAAAACTATAAAATGCTATGGCACATATAT Gene GeneID:407170|KDR:NM_001110000:86_cdna Constitutive 0 NULL GeneID:407170 6 GENE KDR VEGFR2 flk-1 kinase insert domain receptor (a type III receptor tyrosine kinase) EMBV3_36753 CTGATATTTCATTCCTTTGTTTACTAAAGAGACATATTTATCAGTTGCAGATAGCCTATT Gene GeneID:338446|PPARGC1A:NM_177945:156_cdna Constitutive 2 NULL GeneID:338446 6 GENE PPARGC1A NULL peroxisome proliferator-activated receptor gamma, coactivator 1 alpha EMBV3_14828 CAGAACGATTTGAAGGTCCATGCACAGATTTCACCCCTTGGACAACAGAAGAACAGAAGC Gene GeneID:507897|DNAJC2:NM_001075337:117_cdna Constitutive 0 NULL GeneID:507897 4 GENE DNAJC2 MGC139161 ZRF1 DnaJ (Hsp40) homolog, subfamily C, member 2 EMBV3_39029 CCCTCATTGCTCCCCCCACTCATACCCTCTATGAACTTAAAGGAAAACCACTTTGCTCCA Gene GeneID:515088|GIT1:XM_002695704:300_cdna Constitutive 0 NULL GeneID:515088 19 GENE GIT1 NULL G protein-coupled receptor kinase interacting ArfGAP 1 EMBV3_40574 CTGACTGGGAACTGGCGTTGGGCCCTCCGAACCCACCCCGGGGAGCTGCTGAGAAGCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17831 GCCTACCCCCAGCAGAGCCCGTATGCACAGGTACCCTGCTGACTGCCCACTCCCCAACTC Variant GeneID:505853|MGC148679:NM_001109790:15_cdna 448^625 4 EMBV3_06259 GeneID:505853 2 GENE MGC148679 NULL hypothetical LOC505853 EMBV3_04565 AACCTTCTGCAGGGTTGGAATTGAGCTTAGGCGTATCTACAGGAGCCACACGTGCTTGAA Gene GeneID:280824|IL4:NM_173921:10_cdna Constitutive 0 NULL GeneID:280824 7 GENE IL4 NULL interleukin 4 EMBV3_01584 CGCCACCCAGACCTGCAACAAAGTGCGATGCGCGGTGCCCGGGCGTCGGCAGAACACCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14434 CCACTTCCTTTTACATCTCCTCAACAGGCTGTTTAATATCTTCATAACACACTATGAAGG Gene BVV0102_127255 + 0 NULL GK000010.2:3373649-3586113 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26492 TCAGAAGACAAGAGGTTTACTCTCTATACTCGGGGTCGTGTGACCTCTGGCCAATAGACC Gene BVT0101_027817 + 0 NULL GK000010.2:101630219-101895936 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018535 TCONS_00018536 TCONS_00018537 TCONS_00018529 TCONS_00018539 TCONS_00018532 TCONS_00018533 TCONS_00018540 TCONS_00018538 TCONS_00018528 TCONS_00018534 TCONS_00018526 TCONS_00018531 TCONS_00018527 TCONS_00018530 1 XLOC_009275 Coding TCONS_00018527 XLOC_009275 Coding Coding FOXN3 10:101891646-102078194 j TSS12457 7329 1 TCONS_00018527_3 295 0.00832310001364443 4 0.96073375610436 0.000935669139691276 0.000458509139007832 0.00140123674060961 0.00123067375869862 0.000491561725665995 0.000432020641260683 4.39151581247333e-05 0.00158784214059186 0.00108917523518772 3.80194340290746e-05 3.51838479685402e-06 1.3095824441777e-63 0.000258901231682088 0.00103785596516365 0.000195335725996875 2.53786785359186e-73 2.83295361713999e-37 7.60945778643252e-49 0.000941536083720861 0.000432925129268509 0.000209047240137836 2.27738560953392e-95 7.2651437899576e-60 5.56096939455128e-89 0.00171761659222646 0.00117915257149846 0.0011354434925779 4.73386406370171e-74 4.27794942053268e-77 3.72329463741117e-61 NM_001206687.1 FOXN3 Bos taurus forkhead box N3 (FOXN3), mRNA. 0.0 1.228e+04 100.00 0.928776094965207 NM_005197.3 FOXN3 Homo sapiens forkhead box N3 (FOXN3), transcript variant 2, mRNA. 0.0 3238 79.56 0.509755764770091 TCONS_00018527_3 sp|Q499D0|FOXN3_MOUSE FOXN3_MOUSE Forkhead box protein N3; 2e-107 324 78.57 0.779661016949153 0 coding 0 0 0 0 -0.131829623764514 0.567059601173017 0.0219179582838205 0.795169275283082 GGGTAAGGAGTAGAGGTGTAATTAGATCAGACATTGGAACCCACTGTTCATAAAAGATTTGAGGACCGTAGAAGGTGGGGAGAATTCTTGTACTGTAAGTACATTATGCTGTGAATTATGTTGGTCAGAGTAGGTGGTTTTAGGTTATGTTAACTGAAGATGAGTGTTTTATTATGTCAGTAAAAGATGAGAACAAGTGGTGTGAAGATCAGTAACTCCCACTTTCACTGTGGACCAGTCTTCACCGGGACATTTCTGACCAGGTGGGTGGGGGACTCCAAGATACAGAGAAGAGTGGCGAGGCTGGCGAGGGAATCCACGTGTCACCGTGATGGAGCCGGGAATGTGTGATCTGGAGAAGACACCATCCGAAGTTCAGCCTGCCAGCCGTCTTCAGCTTCCCCTGGGAGGGATTTGGTTCCAATGGGTTGAAGTTACAGGAAGAAAGGTTCAGGCTCCACTAAAGAAAGATCTCCCCCACAGAACAGCATCTAACAATACCAGATGCATACCAGGAGCTGGCACATCAGGTCCACCCCTCTGGCCAGGCAGCACCTTCTTCAAGAGGAACGGAGCCCTCCTGCAAGTTCCTCCAGGAGTGATACAGAACGGAACGCGGGTTCTGAGCCGAGGCCTGTTCCCCGGGGTCCGGCCGTTGCCAGTCACGCCCATTGGGATGACAGCGGCTGTGAGGAACGGCCTCCCCGGCTGCCGCCTGCGGACTGAGAGCGAGCCGGCGTGCGGCTCCCCGGTGGTCAGCGGGGACCCCAAGGAGGACCACACCTACAGCAGCGCCAAGGCCGCCGCCGCCCGCAGCGCCTCGCCCGCCAGCGACTGCGCCTCGTCCTCCTCGGCCGACGAGCCCGACGAGGTCGCCGCCAAGGGGGGCCCGGAGGGCAGCGAGGGCAGCTGCCCCAGCCGCGAGAGCCACAGCGAGCCGGAGGAGGACGGCCGGCCGCGCGGCCCCCGGGAGGCCCCGGGCGACGGCGGCCCCGCGCACAAGAAGCGGCCGCCCGCGGCCAAGGCGCGGAAGGTGCCCAGCGACACGCTGCCCCTCAAAAAGAGACGCACGGAGAAGCCCCCCGAGAGCGACGACGAGGAGATGAAGGAGGCGGCGGGCTCGCTCCTGCACCTGGCGGGCATCCGGTCCTGCCTGAACAACATCACCAATCGGACGGCAAAGGGGCAGAAGGAGCAGAAGGAAACCGCGAAAAATTAACAGAAACAAGTCACTGATTTGTTTTGAACTTACGGCCATTTGGTTTCAGCATGTCAGGAGATTTCTAATGATTTGTGGCAATATCAGCAATTTATTCTTTTTTTCTTTTTCCTTTGGTTTGGTTTTCTTTCTTTTCTTTCCTTTTTTTTTTTTAATTTGCCCCCCCCCCCTTGGTTTTGGACCCTTAAGAATTTTATGTTGAAAGGAGATTGAAGCCATAGAACTCATATTGACACTCAGCCGTTTTACAAAAGCTTTTCATTACCTGAAGACAAAACCGAAAAAGCCAAAATGACCATTGCTTCCTCCAGCTTGTCTCAGAATCCCGCGGCTGAATCCACAGGGACGCAGCGGGAACGCCGCGGGGACACACACCCAGCGCTAGAAGGCACGTGTGCAAGGTCACCGTCGATCAGGCCCAACCTTTAGGTTTAAGAGGTCAGGGTGTGCACCCAGCTGGGGTCAGTGAGTGAGCCCACGTAAGGCAACTGAGGAGACGGAAGGACCCCTGGTCCCCCTAGGAGCAGACCCAGGCTCGTGGCACTGGGGCATCAGATGATGCCAGGAGAAGCCTTGGTGTGGCTCCAGCATGCAGTGTGAGGTGGGAGCAGGGCGGTCACCAGTCGTCTGTGCTTCTTAACCACGAAGCCCAGTAGCATCTCCGCAGGCGAACACTGGACCGCTCTTGTTCACCAGGTCTCAGTGACTCATGAGAAGAAACTGGGTCAGTTTTTAATGATGTTGCTGATCATTGGATTCTGTTCTGTATTAAATGAAAAGCAGGTTACACAAGCCATAAGCCTGAAGGTTGGTCCTGCTCATATGCACCTGTGCACACACACACACACCACACACACGGAAGAGGGGAAAAAAAAAAACTGATGCAAAAAACAAGCTGTCTTCTTAACTGCCCAAGTGAAAATCAAGTTCCAAGAAATTACCATAGCTGTTAAGGAAATAATGGTACAAAACTTTTTCTGTCTGTCAAAACCATTTGATCCAAGTGAAAACAAAAAGCTGCGGACCTGCCATTAGTATTGTGTATTTTTAAAAGATGAAAGGCACACTGATGGACAAACTAAAGTAAAATATGGCAAAAAAGAAAAACAAAACTCCTATACTGCCCTCAAAATGGAGTTTGCAATTAACGTCAGTCAGTATTCATCTTTGCAAAAATCAAAATGATTTCCACATTCAGCCGTGTAGCCAGCAGAAATTTCTGATCCACAATGCATGGAATTCCTTTGAAAAAAGAAAAAGAAAAAAAAAATCACAAAAACACAAACTTTTTTTTATTCAAAAATAACAAAGTTCTTGTAAGGTAAATAATGTATTTAGCATGAAGCATGAATTATTTTCATATAAATATAGAAAATAGAGAAAAGGCTATGCCTCTAATTTTTAAGCCCTTAGGCTTAGAGGTTCTTTTGGTTTTCTTCTTTTTTTCTTTTTTTTTTTTCTTTCCTTTCCTTTAATTTTTTTCGCTTTTTTGTTTTTCTGTTTTTTTTCTTTTCCTTTTTTCCGATTATTTTGTTTTGGTTTTTTGAAGCAGGTGTTTAAGGTTTAACCTTCTTCAGGGACAAATTCTGACTGTTGGGGAGCTTACTCTGCAATACAAAAATCTCTTCATGTTCTGGTAGGGCCTGGATGGCGGCGCTCTGGATTGCCTTGTCTGCACTTCAGCCCCCGGCCCCTCTGATTCTCTGTTGAAAAGTGTGTCCTTTCTCTCTGTCTGTGCATGTTTACCATGACGCAATAATCTGAGGGCAAACTGAGTCGTGAGTGTGTATGATAGAATCAAGAGAAGTAAGGGACACTGGCTTGAGAAAACCAGGACCGAGATTTGGTTTCTAGGGGAAAAGGCAGTGAACGATTATGCAATTCGCCAGGAGAAGGGGAAACACGCCTGGGCCTTATCGGATGAGGGTGTGAGTTAGGGTGCCCGTGACGGAGAGAGTGCGCGGGCCTGGGAGGGCCCGGCCCGCAGACGCCCCGACGCCGGTCCCGGCGTCCCCGCCGCCCGGGTGCTCGAGCCCACCTGGAGCGACGCCCACCCGGGTTGTGGCGCGGCGTTCAGACCACCAGGTGAGGGCGCGCGGCCCGGAAGAAGCTCCTGTTACCTTTGCCTGAAAGAAAGGAGTTAGGGAGATCAGAGGAACCTTTGAAAGAGTGATCTTCCGCCCACACGGAAGGGGATTTTAAAGCGTAAAAACACCTGCTCTCAAGATAGACGGTGAGGGAGAAGGAGGGGACTGGGGTGATCTCCACTTTTTGAAACAGGCGGGGTGGGCGTTGCGGAGCCCTCCGCCCGCCCCGGGCACGGCCCGCAGCCCCAGCGGCCGGGACGGCGGGAGAAGCTAACCCGCGCGTCCTCTTCCCCTGGGCTGCTGATGAGCTGAAAAAAAGATCTACAGCCCTGCGCAGGTCAGACTCATTACTGAACCTGAGTGCGCCCAGCGCGCTTGTGCTGGGCGTGGAGAGATGGGGGTAAGGATGTCTTTTCGAAGCGCCCCGGACCCTCCGTCTCCCCACACCAACGTCTGACACCCCAAAAGCCATCCGCAGCTGCGGGATCCGGGCGGCACTTGGCGGTATCCCCTCACCAAGCCCCCCTCAGCCACCCAGCCCTCCCAGATCAAATCCAGACTTCCCTCCCGAAAGGCAGAGACAAACATCCAGGACTGTTTTCTGGCGGGGGTTCCTTCGACGGCGACCCCCACCGGTGGGCTGTCTCCCCTCATTTCCTTTTTTCTAAAGGAGCAAAGGCCTCTTTTAGAAAATAATAAAATGCAATGTGTGTGATTTACTTTTCTGATCTCTTTGAGAAATAGAGAAATATCTTATAAAAGTGTGTTCTTAACTCCAGAACCACTCTTTTTGCATAAATACCTCATCGGGCAGCTTTCTAAGTGTTATTTCCTGCGTCTCCTGCAGTCCCTAACACAGGACCTGCTGGGAGACCTAGGGGAAACTTTAGTGAGGGTACTTTTTTCTATTTTTCTTCTGTTTTTGGAGGCATACACATTATGCATAACCAAAACAATGGCTCAATTGTGTTTAACTTTGTATTTCGATTGTTGAGAAAAAAAAAAACAGTATCGATGTGTCTGTGGCCGTTCATAGTGACTTCATTGCGGAATGAGGTTGTCCATGTCCTTGCCAAGCCGGGGGCAGAGACACCCTCTGTCACCCCCTCCTCCAAGAGCAGTAGAGAATTTAAGCACAAGCCTATTTGTGAAAGAATATTTTGCTCCAGTGTAATTCACTCTAGTCTTGGAATTTCTTCCCAAACATCAGGTGTTCTTTTAGCTTCCAAACTACCCTGTGTACTCATTTAGTCTTGACAAAAATCGCCTAAGCACCGTTCCAGGGGTGTGGTGTTTTTGCTTTGGTTTCTCCTGCTGGGAGAAACGGCGTTTTCGTGTGTCATTCCAGTATCTCACATACTCACGTGGGGCGGGGGGTGGGGGGGCAGTGGGGAACTATAGCAATATTTGAAGATGCTTTTGGGAAACAACCGTGAACTCGTCCGCACCGTGACATCCGCATTTACTTGTTGTCAGTCCTAGGACACGTTTAAGAGACGGAGACTATGCTCTTTCTTCTTAAATGCTATACGCGCAGAAAGTTATTTTTATGCTACTACAGTTGTCTCTTATCTTTACCTAGTACTTTGTGGAAAGGGTCTGCATCATCGATTTTCCCAGCCTTATGATACACCCTAAGCTCCTATTTCCCTCCCCCCTCTCTAAGCAGTATATATATATACACACACATGTGTTCAAGAGTTCTTTGGTCAAATTGTCTATCTGAAACTAAAGTGAACCCACCCCACATCCAGACGATGGTTGGAGAAAACCCTGGCCAAAACAGCTGTGGCAGATTTTAGTCTTGGGGCTGCTTTTTTCAGAAGGACTGTGTGGGAGGCTTCTCCCAAGAGCTGGGTTTTTCCCTGGGAGAGGCACCGGGTGTCTGGCCCTGGCTGAGCGTGGTCGTGAATACCACGTCTCACTGGGGGTGGGGGGGGGGAGCTTCGGGCTGTGGGCTTTGTAGGGTGAAGACCTTCCAGATGGCCTTTGTCCAGCTCAGTCCTGGGGCCCAAATGCTACCAGCCCCCCATCTCAGTGACCCCTGCCCCACACTCCACACGTGTGGGCCCCCAGCCTCTCATCCAAGAGCTCTCAGAGAAGGAATCAATCTGTACAAGTGACCTGCACGGGAGGGTTTTCCACATGGGATTGGATTCAACTCAATGTGACTTCTCTTTCCCTTTAAACTTGATTCAGGTTGGGACTCGTTTCTTTCTGGTGGATCACAGCTGCCCAGATGTTGCCATTTTCTTTTTTATATTTCTGTAGAGGAGTATTTTTCTTTCATCTTCAGGATTTTTTTTTTTTTTGCCACCAAAAGAACACATCTGAACTCCGTGTCCCCTCTTGATTGTGACTTAACCAGTGTTGACAGCTCAATCCTTCGTGTCGTAGGTCCCAGCTCGAATACTATATCAAACACTGTTATGCACATAACGCAGCACTGTGATCTAATTTAAATAATACTTTTTTATTATTTATACTACTATATATAATAGACAGCAACACTTTTGCTATATAACCTAAGTGATAACCCTCTTTTTAGTTACCTACCAAAACTCGGGACTTTGGTTTATATTGCAGTTAACACAGTTACAAAGTTGGAATGGTGTCTTTTTTTTCCTTCGTTGTAATGGAATGTGTAAATCAAAGTATATCTGTTGTGTGGTGTTCCCGTCCCTGGAGCCCCGTGAGAATGTCTGCAGGGCGTTCAGTGTTCTATGTAGACCCACCTGCCTTTGTGAACCCATCTGTCAACCCCCCTTCCTTGGAGAGAGTGCCGGTGATGGTGGCCAACTGCTCTCTCTGCCCCCTACTGGTTATTCTTGAATTAAGCACAGACTCCGTTGCTTTTATCATGAATAATGTGTGTGACCTTACAATTCTTCCACAGTTCAGCAAACAAGTGCTATAGTGTCACTGACCAAAAATTAAGGAAGGAAAATCCGATGTTTTAAACGATCCATCTTTTCACGGCCGAAACCAATGTGTCTATGGTGCTGCGTTCTGCTGTCTGTCCTACTTTTGAAATCAGACCTGGGTGAAAGATCACTTCTGACTTAACTGTGATCGTGCTCACAAGTACCCTTCCTGTTCGTTTTGTTAGCGCTGAAATCAAGACTATTTATTTGGAATAGATACAGCAGTGTTTTTCACTTCCTTTGCAACCGTTGAGAACAGCCTTCCCTACCTTTTGCAAGGAATTAATATTCCATATTGGATTCGCAAAGACTTCGATATGGTGTGTCTAGCAAACCTAGAAACTGTCTCTCACCCTTTCACGACTGTGGCCTGAGTTCCTAACCCCTCCCTTTTGTTAGATGAAACTCTTAGCACAAGTTCAGTTATTTAAACGTGCAGCATTGCCCGAGTGTGTGTGTCGAGCCATCGACACAGCTGATTCAGTAACCGCTGTTCACACTCGCTACTGACACTGCCATGGTGACAATGTGGAGGAAGCAAGTATCCGTGTGTGTCTGGGAAGCATTATACACGTGTACATTTTTTTATACTCTGATTCTGTAACATTTCTGAGTTCTGTTTTTGTTTTACAGAAAAATAAATAACAGTGATAAAGCAATCAGAAGACAAGAGGTTTACTCTCAATACTCGGGGTCGTGTGACCTCTGGCCAATAGACCTCCATGGCCAAGTGTATTCAGTTAGAGTAATAAGTTTTCAAAAGCCAATTTTCGTCCGTGTTTCTTTCTGTATGAAACTGCCAATATCATGAACAGAAAGGGAGACCCGTAGAGGAGAAAGTGACGTTCGGTCGCGTTTGTGTTGCCTAGAGGAAGAGTGGAAGCAGGCACAGCCCGCCCACCTCGAGGGACCCGATGGCGTTGCTTGGAGGCATCCATACTTGCATTTCGCATCCTTCGTATGTAATCATATTGCCAAAGACAAACTATTTCATCATTTATTGTAAATAACACTTTCCCCCCAGACCTACCATAAGGTTTCTGTGATGTATTGTCTTCCAGTTGCAATAAAAATGACTGAGTTGCATCAATTGAAGAAA EMBV3_43084 AACATGCTAGTTGGAAATAAAATTGATAAGAGGCAAGTGCAAAAACCTGTGATGGTGTAC Variant GeneID:511160|RAB18:NM_001075499:28_cdna 429^495 2 EMBV3_39282 GeneID:511160 13 GENE RAB18 MGC139746 RAB18, member RAS oncogene family EMBV3_03640 GTGGTGATGAAGCGGAGATCCGGCCAGCGCAAGCCGAGCCGCCCCACCAAGAGCTCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26415 GACATACAGAAGAACATATGTGTAAATGGCCAAGTATCTGTGTAAATGTTCTATTGAGCT Gene BVV0102_351093 + 1 EMBV3_32263 GK000018.2:60281431-60286462 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21100 CAGAGGGACCACAGATAGAGTTCTCGGCGTGGTGTACTACTATTTTCAGGGGTCTTTGGG Gene GeneID:100137867|LOC100137867:XM_002687968:89_cdna Constitutive 0 NULL GeneID:100137867 5 GENE LOC100137867 NULL hypothetical protein LOC100137867 EMBV3_22378 TGTCTGGGCCAAGGAGTTTTGTGAGCCCTGGAGTGGGTAAAGTCATCAGTGTCACCAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31875 TGTGTACACTAAAAGATACGGAAGAGGTAGAACTGAAGTTTCCTGCACCAGGCAAGCCTG Gene GeneID:541040|SEC63:XM_002690124:152_cdna UTR3_Alt 2 NULL GeneID:541040 9 GENE SEC63 NULL SEC63 homolog (S. cerevisiae) EMBV3_40245 GACTGAGATGCCTGAGTAGCCGTGAGGTTGGTTATGGTTGCCCTACTTTGTGAGTTAACC Gene GeneID:510190|TM7SF3:NM_001076827:5_cdna UTR3_Alt 2 NULL GeneID:510190 5 GENE TM7SF3 MGC140686 transmembrane 7 superfamily member 3 EMBV3_36143 GCCCCTGACTGGACATTTTTACACTGCTTGCCCAGAAAGCCAGAAGAAGTGGACGATGAA Gene GeneID:280887|OTC:NM_177487:4_cdna UTR3_Alt 2 NULL GeneID:280887 X GENE OTC NULL ornithine carbamoyltransferase EMBV3_23576 CCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAAAAAGA Gene BVV0102_131761 + 0 NULL GK000008.2:72631459-73085152 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122094 TCONS_00241066 TCONS_00066405 TCONS_00034472 TCONS_00129428 5 XLOC_073650 XLOC_147730 XLOC_041119 XLOC_020687 XLOC_078141 NonCoding TCONS_00241066 XLOC_147730 NonCoding NonCoding - 9:59411083-59412679 - TSS180744 1596 2 TCONS_00241066_3 52 1 0 3.83618306476266e-06 0 0 5.20310846526627e-07 0 0 0 0 0 0.000371602900397673 0.000357601974581728 0.000119595869008014 5.78238343294847e-05 6.3436643798457e-05 0.000423366625732826 0.0434995119042029 0.00915912048134125 0.0335503791342459 0 0 0 0.0119063293741613 0.0103354717804554 0.0203104914748732 0 0 2.62224429621199e-07 0.0015197245229825 0.0010367077463294 0.00443118164624402 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 2e-70 271 86.70 0.143483709273183 0 noncoding ACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGCTACTGTTAATTTAGATACTTGGGTGAAGGGGAAAAAAACAACTGAACACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACAAGGAAAAGGAGGGACACTGTGCTCTACCTCCCGAGGAGTGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGGCGAGCCCCCTCTCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGCGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAAAATTCCCCAGTTTACATCCAAAGCCTCCCAGAGCATTGCCTAAGGTTGAAAAAGATTAAAAAGTTTTATTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGCAGAAAACCCCCTCAGGGGGGCTTCACCCAAGCAAAAAAAAAAAAAAAGAGAGAGAGAAAAATAAAAAGAAAAAAGGAAAAAGTGAAAAAGAAAAAAGGAAAGAAAATAGAGAAAGATCTAAAGATAGAAAAAGAACTAAAGAGTGAAAAGGAGAGAGGATCGGAGGAGGAAGGAATCAGGGAATGCAGCAAGATAGAAAAAGAAAAAAAAAAGGAAGTTAGAAAAAGAGACACAGAGAGAAAGAGAAGGAGGAGGAAAGAAAAAGTTAGAGAGAAAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAGAAGAGAAGAGGAAGGAAAAAAGATAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGGAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTTACAAGACACTGTGGCCAGACGCCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCACCTTCCAGGGCCCAAGAGTTCCCCACTTGGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAACAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCCTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAGCCCAATGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTCGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAATAAATAAATAAATAAATGAAAGAGAAAGAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACA TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 . 5' 1142961 EMBV3_04244 ATGCACATCACCGTGGTGCACAACTACCAAATCTTCATGCAGCTGGAGAAGGTCTGGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08350 CCCGTGTTGAGAGTGGGATTGGGGGAAGCCAGTTGTCTTCTCTGGACTCCTGAAAATTAA Gene GeneID:506996|USP43:XM_002695882:397_cdna Constitutive 2 NULL GeneID:506996 19 GENE USP43 NULL ubiquitin specific peptidase 43 EMBV3_34486 AGATCTTTCAAGAAGGCATAAAGGTCTTGGAAGCACTGGTGGCCGTGGCTGAGGAACAGC Gene GeneID:507297|HEATR5A:XM_002696697:76_cdna UTR3_Alt 2 NULL GeneID:507297 21 GENE HEATR5A NULL HEAT repeat containing 5A EMBV3_11496 GTCACTGAATATGCTGTAGTCTTGAATAGTGCCCTGACAAGGGGCAGAGTTTAGATGCGC Gene GeneID:613674|VMA21:NM_001081616:104_cdna UTR3_Alt 1 NULL GeneID:613674 X GENE VMA21 MGC142430 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) EMBV3_21926 GACATCGTTAACTCAGGTTGTCATTGCCATTTCAGAGTATCTGGAGGATACCAGTTCCTC Gene BVT0102_154161 + 0 NULL GK000002.2:4208492-4226353 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104359 TCONS_00104360 TCONS_00104358 TCONS_00104361 TCONS_00104355 TCONS_00104362 TCONS_00104357 TCONS_00104363 TCONS_00104356 1 XLOC_062357 Coding TCONS_00104355 XLOC_062357 Coding Coding UGGT1 2:4222277-4278531 j TSS77288 6774 1 TCONS_00104355_3 892 23 0.879988622829005 5.85753447355179e-20 0.000358648524284812 2.05958481117707e-25 0.000198211471075387 8.96993520573206e-49 2.29150979969405e-85 2.66443209246357e-81 0.000516298751184447 2.47784183837887e-15 0.000798663161864594 0.000371887227446162 1.73957322675118e-05 3.18086558439022e-06 6.39423001821296e-08 0.000110775051353635 0.0136852256006755 4.45994878499555e-19 0.00576090683906639 0.000925005767839594 0.0011393288148295 2.80547497313284e-40 0.00521925613963297 0.00384622197610218 0.005676158927558 0.00110825595550042 2.95359144100603e-12 0.000811325730750865 0.000794580336249921 0.000506820027274771 0.000852491775144549 XM_005202234.1 UGGT1 PREDICTED: Bos taurus UDP-glucose glycoprotein glucosyltransferase 1 (UGGT1), transcript variant X2, mRNA. 0.0 1.210e+04 100.00 0.990256864481842 NM_020120.3 UGGT1 Homo sapiens UDP-glucose glycoprotein glucosyltransferase 1 (UGGT1), transcript variant 1, mRNA. 0.0 4105 84.28 0.541334514319457 TCONS_00104355_3 sp|Q9NYU2|UGGG1_HUMAN UGGG1_HUMAN UDP-glucose:glycoprotein glucosyltransferase 1; 0.0 1682 94.49 0.986547085201794 1 coding 0 0 0 0 0.0840652220898088 0.448094730014789 -0.0232744608744817 0.674777760370241 ACTAAGACCATCTAAAGACATGTCTACAACATGTTGCCACGGACCAGCAAATGGATTATATAAGGGTGAACTGTCCCATGATCAAGATGTGGTAGAGTATATCATGAATCAGCCAAATGTTGTTCCACGAATCAACTCTAGGATTTTGACAGCTGAGCGAGAATACCTGGACCTAACAGCAACCAATAACTTTTTTGTGGATGATTATGCTAGATTTACCGTCTTGGATTCCCAAGGCAAGACTGCTGCTATAGCCAACAGTATGAATTATCTGACTAAGAAAGATGATTCTTTTATTAGACCAGTAACTTTTTGGATTGTTGGGGATTTTGATAGCCCTTCTGGAAGGCAGTTGTTGTATGATGCTATTAAACATCAGAAATCCAGTAACAATGTTAGAGTAAGCATGATCAATAATCCTAGTGAAGATATAAGTTATGAGAAAACTCAGATCTCCAGAGCAATCTGGGCTGCTCTCCAAACCCAGACCTCCAACTCTGCTAAGAACTTCATCACAAAAATGGCCAAGGAGGAGACTGCAGAGGCCCTGGCCGCAGGAACTGACATCAGGGAGTTCTCTGTTGGGGGCATGGATTTCAGTCTTTTTAAAGAGGTCTTTGAGTCTTCCAAAATGGATTTCATTTTGTCTCATGCCATGTACTGCAGGGATGTTCTAAAGCTGAAGAAAGGACAGAGGGCAGTGATCAGCAATGGAAGGATCATTGGGCCACTTGAGGACAGTGAATTCTTTAATCAAGACGATTTCCACCTCCTGGAAAATATCATCTTAAAAACTTCAGGACAGAAAATCAAATCTCATATTCAGCAGCTTCGGGTAGAAGAAGATGTGGCCAGTGACTTGGTAATGAAGGTGGATGCTCTCCTGTCAGCTCAACCAAAGGGAGATGCAAGAATCGAATACCAGTTTTTCGAAGACAGACACAGTGCAATTAAACTGAAACCCAAGGAAGGGGAGACATACTTTGATGTTGTGGCTGTCATTGACCCTGTCACCAGAGAAGCACAGAGACTTGCCCCATTGCTTTTGGTTTTAACTCAGCTGATCAACATGAATCTAAGAGTATTCATGAACTGCCAATCTAAACTTTCCGACATGCCGTTAAAAAGCTTTTACCGTTATGTCTTGGAACCAGAGATTTCTTTTACTTCAGACAATAGTTTTACTAAGGGGCCAATAGCAAAATTTTTGGATATGCCACAGTCTCCTCTGTTCACTCTAAACTTGAACACACCTGAGAGTTGGATGGTAGAGTCTGTCAGAACACCATATGACCTTGATAATATTTATTTAGAAGAGGTGGATAGCGTCGTGGCTGCTGAGTATGAGCTGGAGTACCTGTTACTAGAAGGTCACTGCTATGACATCACCACCGGCCAGCCCCCCCGGGGACTGCAGTTTACATTAGGAACTTCAACCAAGCCAGTCATTGTGGATACCATTGTTATGGCTAACCTGGGCTATTTTCAGTTAAAAGCCAACCCAGGAGCTTGGATTCTCAGACTAAGAAAGGGACGTTCTGAAGATATTTACAGAATCTACAGTCACGACGGTACAGATTCTCCACCCGATGCTGATGAAGTTGTTGTTGTTCTCAACAACTTCAAGAGCAAAATTATTAAAGTGAAGGTTCAGAAGAAGGCAGACATGGTGAATGAGGACTTGCTGAGCGATGGGACTAATGAGAATGAATCTGGATTTTGGGACTCCTTCAAATGGGGCTTTACAGGAGGACAGAAGACCGAGGAAGTGAAACAAGACAAAGATGACATAATTAATATTTTCTCCGTTGCATCTGGTCATCTCTATGAAAGATTTCTTCGCATAATGATGCTATCAGTACTGAAGAATACCAAGACTCCAGTGAAATTCTGGTTCTTGAAGAATTATTTGTCCCCCACGTTTAAGGAGTTTATACCTTATATGGCGGACAAATACAATTTTCAGTATGAGCTTGTCCAGTACAAGTGGCCCCGGTGGCTTCACCAGCAGACTGAGAAGCAGCGCATCATCTGGGGTTACAAGATCCTCTTCCTGGATGTGCTGTTTCCACTGGTTGTTGACAAGTTCCTGTTTGTGGATGCGGATCAGATTGTACGAACAGATTTGAAAGAGCTAAGAGATTTCAATTTGGATGGTGCTCCTTATGGTTACACTCCTTTCTGTGACAGCCGCAGAGAGATGGATGGCTACAGGTTCTGGAAGTCAGGGTACTGGGCCAGTCACTTAGCTGGGCGAAAGTACCATATCAGTGCACTGTATGTTGTGGATCTGAAGAAGTTTAGGAAAATAGCAGCTGGTGACAGACTCAGGGGCCAGTACCAAGGTCTGAGTCAGGATCCTAACAGCCTTTCAAATCTTGATCAAGATTTGCCCAATAACATGATCCATCAGGTGCCAATTAAATCACTCCCTCAAGAATGGCTTTGGTGTGAAACGTGGTGTGATGATGCCTCTAAGAAAAGGGCAAAAACAATTGATTTGTGTAATAATCCAATGACCAAAGAGCCCAAGCTGGAGGCCGCTGTTCGAATTGTCCCAGAGTGGCAGGACTATGATCAGGAGATCAAACAGCTACAGCACCGCTTTCAGGAGGAGAAGGAAATGGGAGCACTGTATAGAGACAAGACAGCAAAGGAGGCAAGCCGAGAAGGACCTCAGACACATGAGGAATTATGATCTCCACGGAGGATAGGAAATTATACCATTTGAAAAACACTTTTTATATTAAATGCTAGTTTTTTCCAATTTGTCTATACAACTGCTGATGAACCGACTGGGCATGCCGCCCTGTTCATCCTGACTCCCGCACGCTGGCAGCTCTGGATCTCTGGAGTTAAGGCTTTCTACTAGATTCGAACCTCAAAGGAAGACAAGAAACTGATCTTTGGGGGACTCTATGAAGAGCAGGCCTCTCACCAGAAGAGAAGATGGCAAAAGCAACTGGAAGAGAAACAAGCCCACACGTGCTGCAGTGTCTTAAGAGGCCACTAGCCGGAGCCGCCGGGTCCTCCTTACCTCAGTCCACGGGGAGGGGCGGCGGAGCTCCTTGCAGCGGGGGCCACCCTTCCGGGCGGATAGTGGGTGGGGCGGCGCCCATGCGGGCCTCTCCGGGTTTGCGCCAGTGGGCCCCTGTGCCCTTCCCCAGCATCAGGTTCATTGTTAAATTGAAACCCAATGAACAATCATGTGTCTTCAGGCTAAGCTCGGGGCAAATTAATTTGGGGAGAGGACGAGGGGAGGAGGGGGTGGGTTGGGGTGAGGGTAGGGAAAATAGCAGCAGTAGGAGGGCTCTGGAATGTTGGGGGAGGGGTCATGAGGAAAACCAGAAATTGGCCTTTCTCTTTTATAAACCGTCAGAACCATTGTGACTAATATGAAATGAAGACATTATTCTTATTCTGCACCCAGCCCCAGTGAACTTTTTAAGTAATTGTTTTGTAAGCAATTTTTGTATTTGCAAAAGTCTTTGCTTTCTCTTCCCACTTTCTTACAGGAAGTCTGTTATTTCCTTATTGGATACAGCCATAGTAAGCCTCTCTAGTGATCCACCTTGAGGGGTTCAGAACTCCCTCAGGAAGGTCACCACATCATTTACCCGCTGCTTCTCTGCAGAATTTTTGTCTCTCAGACCCAGGGGAAGTTGGCTTTGTCTTTTCTCTACAAAAGACTCCCAGATCTGAGACCAGGAGAGATTTTGATTGTGTAACTCATTTTTTTATAAATACACCGTTCTGTAGTTCTTTCAGTTTAAGCCAGCAGACGTTGCCAGCCTTCCCCTCGTTCTGCCTCTACAGAGTTGCTTCTTGAAGTAAGAAGGACTCATGAGTCATGGCTTTTTGTGTCGTTAGCAACCCGGAACAGCCCTTGCACAGCAGCCTTTCCTACTGGGTGGGCAGTGCTGGGAGGCACCCAGAGGAGTCTTCCGGTTGTGTGAAACTGCAGGTCCTGCTCCCCGTCTGCCCAGGCTGCAAGCTACAGCTGCAGAGCACTCCATAGACTCCTTCCAGGGTCTTAGGACAAATATCAAATAATTAATTTTTTTCCATATTCATATGCAAGCATTAGTTCAGGAGTCTGTAAGTCTGAAGGAGCTTTTGAGTTTGCTTTTGTAAAAACTGGGGAGGAGGGACTTGTAGATAAATTGATCCAAGACTAAAAAGGTCCCTTAGAGTTATTGCTGTTGACAAAGGCGGTAGTGTGATCTATCCCCCCACCCCCACCCCCCAACACTGCTCCTCTACTGGTCAGAGCAGCTAAAGGGATAGAATCAATGAGGATGAAAGACATTTGCTCAGCTTCATCTGAGGTTTAATTAAGTCTTCCGAGAAGCTGCTGTCGCCACCACTTGTGTCTATAAACCATGGGCACAGTGGTGCTTTTTTCCAGTTTATTTTCTGGGATATTGAGCAGGAAATAACTAAAAAGTCACTGGGATATGCTTTCTAAATGCTGGTTCCCCTGGGTCATGGAATAGGGCACCTTTCCACCTCTTTATGCCTGGTCTCTCATGCGTATTCTGTATGAGGAAGGTGCAGTGTGAAATCTGTTCTCTGTTCAGTGTGTATTCTCATTGCCCCTTAGCACCCTGGATTTAAGTCTCTAAATATGCAAGCCCCAGCCTGCTTCTGAGATGGCCTCAGACCCTCCTCCTCATGCCAGGAATTCTTGGTTCATGTGGCATAAGATCTTCCAAAACGAATCTCTAGCACCCTAGGAAATGATGCTGCCACAAAAATTTGGTCTTGGTCAGCTTTGTCTGCTGTTTCTACTGTGTGAAAGCAAATTGTGACTGAAAAGATTGGTAGATTTTTTTTCTAAGAAACATGAATTGATTTCATTGAAAAGTTGAAGCTTCTGGAAACTGTTCACAGTGTGTTGTTTTTAACCATCATGTATATGTAATGAATCTTTTTCTTTCATCATGCCATAATAGAAAACTTGTCTTAATCAGTGCCAGAGTGATATGAAATAACGTGACATGTCAGAATGAAATGCAACAGTGTGACTTTTTGTGTTCTGTGAACAGTGATATTTGATTGAGGTCAAAATGCATGTAACACAATCTGCTGTTGGGGCTGTGGGGACATGCCTGTGTTTTGTTTTAAAATTGTCCTCTGTACGTAGCACATTGAGGATGATGGTGTGTTAGTTTTCCATACAATTGATAAAGTGTTGAATCTCTCACAATGCATTTCAGATTGCACACGCATCTGGTAAGCCCATGTATTTTGTGAACTCAGCTCTCTGGAGAGAGCAAAGGTTTTATAAACATTAAGAAGCAGTTCCAAGAATGGAGCTTAATTTCCTCTGCTGTCCTCACGACTTCCTATTACGAACCTTCTTAAGATTCTGATGGAGTAAACAATGATTATCTGGTTGCAGAGTCCCTGATGGCCAGGGACAGCAGTGCAGCTTCCAGAAGAGACTGGGAGGAAGGAAAACCCATTCCCTTTGGCTGGGAGTTACACCATACTGCCACTGTGACCTGGAGCTGGCCAGATACCACCCTCAAAACGAGTACGATTCCCCTTCCCCCACACCTGCTTCATGAGTAAATTTAGGTACTTGAAAGCAGTTTTTTCCCCCCTACGATTGTCATGAATGGTTAAAAGAAGTGATTCAGCGCAAGAGTTCCAAGGGAACATCTAGTGTGTTTTTCTGGATAAAATGATGTTAGTGCTGGAGTATCAAATTTCATGGAACTATTAAAGTTTTTGTAAAGCTATGTAATGGAAGATTTCTCTTGGTAACAACAAATGGAGGGTGCATTGTGTGCAAAGTTATTTAAATTTATATTCCATTGTGTAATTTTAATAGTTTTTTAAATACTTTATTTTATGGGGACATTTTTGTGGGTTAATCAACTTGAATATTGCTGTTAAGTGTCTAGTCTGGTGGGATAAACTTTTTAATTTAAATTTCTGTTTTCTCAGTCTTGACATAGTGAGGAAAGACCTTTAACCTGACAGAGTTCACCACATGTAGACATCGTTAACTCAGGTTGTCATTGCCATTTCAGAGTATCTGGAGGATACCAGTTCCTCTTTTATTATTTGGTCTTTGAGCTCTCAACCTAATGCAGAAATGACTTTTCTGGGTGGCGATGAGTCCGTGCCCTGACTGGAGGATCTCTCCCTGTCAGGGTGTCATGAGTGCTGACAGTTTTTAAAAAACAAATCAGGAAATCAGCTTCCGAGGTAGTCCAGAAGTGAGGCCATCTCCTGAGCCCTTTCCAGTTACCTCACAGCACAGAGGCCAAATGTGGCAGATTTAAGTAGGACATGAGTTAGGGTATGAACCAGGGCCTTCATCCCACCTGTAATTTATGCATCGCCTTACTTGTCACCTTTTAGATTTCCTCAGAGAAATGGGTATAATTCCTCTTTAAAATGAAAATAGCAAAATACAGTAACCTAAGGTCAACAATTTGAGACAAGAATATGAAGTACCATGTTTTCCAGTCACTTGTTTTTGGTAATAATAAGGTAAACATGGAAAAACAAAGTAAAATATTAGAATTTTTAAAGAAACTATGTACTTTAAAAAAACCCTTTGCAACTCTTGTGTTTTACTGTAATCATGTTCTATGAAATGCACCATAGGTTTGGGTGCTGCCCCTTGCTTTGGAGCAAGCACTGGGGCGCTAAGTGTCTGCAGAGCCCTCTGCGCCGGAAATGAACTGAGAATGAATTTCTGGTACTGTAATGAAAATAAGGTCAACACAATAAACTTTTCCTTCTCTTCTTTAAAGC EMBV3_34578 AGTCTCTCCAAACGAGCTCATCCTGGGCTGCACTTTAATGGGTGTTCCTGGGAGGACCAT Variant GeneID:513793|EIF3F:XM_002693065:376_cdna 658^795 3 EMBV3_31382 GeneID:513793 15 GENE EIF3F NULL eukaryotic translation initiation factor 3, subunit F EMBV3_37459 TTTCAAGTATGGCCTGATGCCTGGCCCTTCTAGCGATTTCAAGTATGGATTGATACCAGG Gene GeneID:785123|ZBTB10:XM_002692740:226_cdna UTR3_Alt 2 NULL GeneID:785123 14 GENE ZBTB10 NULL zinc finger and BTB domain containing 10 EMBV3_05094 GATCATTTCTAGGCAAAATTGTGAAGCTAACAACCAACCTATTTCTACCTATGTGCAGTC Gene GeneID:408000|SEPT7:NM_001001168:39_cdna UTR3_Alt 3 NULL GeneID:408000 4 GENE SEPT7 CDC10 septin 7 EMBV3_05168 TGGAGACAAGCCTGGTGCCGCTGTCGGACCCCGCCTCATGGTGGAGAGTCACCACTCGCT Variant GeneID:530855|GALK1:NM_001099381:419_cdna 697^961 2 EMBV3_10880 GeneID:530855 19 GENE GALK1 NULL galactokinase 1 EMBV3_04370 ATGGCCTTCTCTAACCTGTCTGCTTGCTCCAGCGACCTGAGCTACAGCAGCCGGATCTGC Gene GeneID:616413|KRTAP10-12:XM_002685130:86_cdna Constitutive 0 NULL GeneID:616413 1 GENE KRTAP10-12 NULL keratin associated protein 10-12 EMBV3_24505 AGAGGAACATCCGCCTGGATCTGAGGAGAGCACCTGAGACATCATTTCTTGTGCAAAATG Variant GeneID:507549|TIMD4:NM_001075320:2_cdna 420^788 3 EMBV3_26798 GeneID:507549 7 GENE TIMD4 NULL T-cell immunoglobulin and mucin domain containing 4 EMBV3_30347 ATCCTTTCCAGCTTTTGGCTCCTGAATACCCTGTCCCGCTTCGTTCCCAGATAACAGACC Gene BVT0102_254458 - 0 NULL GK000014.2:72941716-73175490 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38195 AGAAGCAGCCTCAGACACCTCTGGGATGTCGTGAGGAAAGGTGACGCTGGACCGAGGCTT Gene BVV0101_032046 + 1 EMBV3_40763 GK000027.2:6031031-6181840 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155859 1 XLOC_094860 NonCoding TCONS_00155859 XLOC_094860 NonCoding NonCoding EBD 27:6170809-6171207 = TSS116548 398 2 TCONS_00155859_2 36 1 0 0 0 0 0 7.4429832805262e-05 0 0 0 0 0 0 0 0 0 5.15066973294954e-06 0 0 0 0 0 7.62746152617456e-06 0 0 0 0 0 0 0 0 0 XM_005199579.1 LOC101902646 PREDICTED: Bos taurus uncharacterized LOC101902646 (LOC101902646), 0.0 719 100.00 0.99748743718593 0 noncoding GAAGTGTGTCCGGCGTCGGGCGGCACCACGCAGCTTTGTGCAGAGCGCCCCAGGACCCTCTCCGTGCAGACTGCCCCAGGACCCTCCCTGCGGCCTCAGACAGCCTCCGGGGGGCGACCTCGAGCGGCCGTTCCCTCCGCGGGGAGCAGGACCACACCGAGGTCAGGAGGACTGAGCCCCGGCTGGATGCAAAGCTGGGGCCCGCCAGCGCGCGTGTCCCGTCCCGCAGCCCCCTCGCTCGCTCAGAAGCAGCCTCAGACACCTCTGGGATGTCGTGTGGAAAGATGACGCTGGACCGAGGCTTTGGACCCGGGCTCCGGTCCCGGCTCCGCCTCCGACTACAGGTCACGTCCCTTCGCGCAGTCTCCGCGCCCTCGTAGGCGAGATGCCACAGCTGG EMBV3_15052 CATCCCTTTCCACGTGATGAAAACAATGAATTTGAGGGCCCGGCTGGATTTTCAGACCCC Gene GeneID:281963|P2RY1:NM_174410:11_cdna Constitutive 0 NULL GeneID:281963 1 GENE P2RY1 P2Y1 purinergic receptor P2Y, G-protein coupled, 1 EMBV3_03961 AAGAGATCTAGTACATACAGAGGGGCAGCTTCAAATCTTTCTTAGTAATTATAATATACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05516 TGGTGGCTGGGAGTGGTTGGAAGGCATGGTGGTTGATGTTAACCCCGTCTGAATGTGTAT Gene GeneID:513599|TMEM79:NM_001014920:135_cdna Constitutive 0 NULL GeneID:513599 3 GENE TMEM79 MGC13102 transmembrane protein 79 EMBV3_33437 TGTTGAGTCAGACCAGAAAAAACCAAGGAGAAAAGACACACCAGCCCTGCATGTTCCGCC Gene GeneID:616856|LOC616856:XM_002686828:7_cdna Constitutive 0 NULL GeneID:616856 4 GENE LOC616856 NULL similar to G-substrate EMBV3_20729 GAGGCTAGGCGCTTTCTTGACTACCAATCCAAGTTTGGGACCTAAGCCACAGTACACAGT Gene BVT0102_059428 - 0 NULL GK000020.2:63127327-63676556 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00207486 TCONS_00118040 TCONS_00210913 TCONS_00230720 TCONS_00242420 TCONS_00145751 TCONS_00123823 TCONS_00001867 TCONS_00118458 TCONS_00174808 TCONS_00174809 TCONS_00251626 TCONS_00132066 TCONS_00174807 TCONS_00055559 TCONS_00107436 TCONS_00078426 TCONS_00174805 TCONS_00206300 TCONS_00171428 TCONS_00174806 TCONS_00036107 TCONS_00056149 TCONS_00232824 TCONS_00118487 TCONS_00125692 TCONS_00031759 TCONS_00001866 TCONS_00206299 TCONS_00218430 TCONS_00117924 TCONS_00246741 TCONS_00001865 TCONS_00103962 27 XLOC_126002 XLOC_072206 XLOC_129423 XLOC_140210 XLOC_149084 XLOC_088920 XLOC_075375 XLOC_000454 XLOC_072622 XLOC_104695 XLOC_154567 XLOC_080699 XLOC_033367 XLOC_063346 XLOC_047314 XLOC_124877 XLOC_103815 XLOC_021081 XLOC_033952 XLOC_142307 XLOC_072644 XLOC_077234 XLOC_018004 XLOC_131750 XLOC_072090 XLOC_151107 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_34878 CTTCCACCAGCCTCTAAGGACCATCTCTTATATTCCTGCCCCTTCCCTGAGCCAATAGAG Gene BVV0102_090432 + 0 NULL GK000021.2:2046876-2346807 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120376 TCONS_00120375 TCONS_00120377 TCONS_00120381 TCONS_00120374 TCONS_00120379 TCONS_00120380 TCONS_00120382 TCONS_00120378 TCONS_00120383 1 XLOC_073158 Coding TCONS_00120377 XLOC_073158 Coding Coding UBE3A 21:2343606-2444366 j TSS89923 7856 1 TCONS_00120377_5 854 0.0199847250509165 11 0.922140950188073 1.33610603225302e-111 1.85072370008589e-15 5.72763661240697e-06 4.79163987198518e-06 1.35338174224836e-80 6.61916838205838e-70 4.25603583052756e-12 1.95811530719087e-06 6.41637651287414e-16 1.52859954817891e-05 2.25016398863173e-05 7.39722956137014e-16 1.35419721514464e-66 2.28706990275114e-14 1.28923133808914e-59 0.000274394683672661 0.00025389897485528 2.73366851309013e-05 2.08631828059114e-06 1.82681590661868e-06 3.0707410711464e-28 0.000541415035638973 0.000266358820556347 6.28232467681808e-34 2.81674902047335e-44 4.17880115892981e-31 5.25236306217027e-122 4.24988708693314e-17 8.68686616843612e-47 1.37613666327242e-20 XM_005221701.1 UBE3A PREDICTED: Bos taurus ubiquitin protein ligase E3A (UBE3A), 0.0 7939 100.00 0.560208757637475 XM_005268271.1 UBE3A PREDICTED: Homo sapiens ubiquitin protein ligase E3A (UBE3A), 0.0 6286 89.56 0.58821283095723 TCONS_00120377_5 sp|Q05086|UBE3A_HUMAN UBE3A_HUMAN Ubiquitin-protein ligase E3A; 0.0 1660 97.43 0.998829039812646 1 coding 1 1 1 1 0.225559891403826 0.508059271216393 -0.0632273450962048 0.380138461741195 CCTGTGACCCCCGGTGCGGACGGACAGCGGTGGAGCGGCGGCGGGCGGCGGGCGCGGGGCTTTTTGCGGCCGCTGCGCCCCCTTTCCCGGTCTCGGACTCCGGAGAACGAAGCGCGGGTCCCGCATGAGCGCCGGCGGTGGCGGCAGCGACAGGGAACGAGGCGGTGGCGGGCGGAGGCGGCGGGCGAGGGCGACGACAACCAGCGAGGCGGCCGCTGCTGCGGGGGCCGTGGCCCAGGCGCGGGGGCGACGACAGATCATCAGGAGAACCTCAATCTGACGACATTGAAGCTAGCCGAATGAAGCGAGCAGCTGCAAAACATCTAATAGAACGCTACTACCACCAGTTAACTGAGGGCTGTGGAAATGAGGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCGTCGTATGGATAACAATGCAGCAGCTATTAAAGCCCTCGAGCTTTATAAGATTAATGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAAAACTCTAAAGGTGCCTCTAACAACTGCTCTGACATAAAAATGAACAAGAAGGACGGGCAAGGAGCAAGAGATGATTTTAAAGATGTGACTTACCTAACCGAAGAGATGGTGTATGAAATTCTTGAATTATGTAGAGAGAGAGAGGATTATTCCCCTTTAATTCGTGTTATTGGAAGAGTTTTTTCTAGTGCTGAAGCATTGGTACAAAGCTTTCGGAAAGTTAAGCAACACACCAAGGAAGAACTGAAATCTCTTCAAGGAAAGGATGAAGATAAAGATGAAGACGAAAAGGAAAAGGCTGCATGTTCCGCAGCAGCTATGGAGGAGGATTCAGAAGCATCTTCCTCAAGGATAAGTGATAGCTCACAAGGAGATAACAACTTACAAAAGTTAGGCCCTGATGATGTGTCTGTGGATATTGAGGCTATTAGAAGGGTCTACACCAGATTGCTCTCTAATGAAAAAATAGAAACTGCTTTTCTCAATGCACTTGTGTATTTGTCACCTAATGTGGAATGTGACTTGACGTATCACAATGTATACTCCCGAGATCCTAATTATCTGAATTTATTCATTATTGTCATGGAGAACAGAAATCTCCACAGTCCTGAATATCTGGAAATGGCTTTGCCACTATTTTGCAAAGCAATGAGTAAGCTACCCCTTGCAGCCCAAGGAAAACTGGTCAGACTGTGGTCTAAATACAGTGCAGACCAGATTCGGAGAATGATGGAAACATTTCAGCAGCTTATTACATACAAAGTCATAAGCACTGACTTTAACAATCGAAATCTAGTGAACGATGATGATGCTATTGTTGCTGCTTCCAAGTGCTTGAAAATGGTTTACTATGCAAATGTAGTAGGTGGGGAGGTAGACACAAATCATAATGAAGAAGATGATGAAGAGCCCCTTCCTGAGTCCAGTGAATTGACACTTCAGGAGTTATTGGGAGAAGAAAGAAGGAACAAGAAAGGTCCTCGAGTGGACCCACTGGAAACTGAACTTGCTGTTAAAACTCTGGATTGTCGAAAACCACTTATCCCTTTTGAAGAGTTTATTAATGAACCACTGAATGATGTTCTAGAAATGGATAAAGATTATACTTTTTTCAAAGTAGAAACAGAGAACAAGTTCTCTTTTATGACATGTCCCTTTATACTGAATGCTGTCACAAAGAATTTGGGATTATATTATGACAATAGAATTCGCATGTACAGTGAACGAAGAATTACTGTTCTCTACAGCTTAGTTCAAGGACAGCAGTTGAATCCATATTTGAGACTCAAAGTCAGACGTGACCATATCATAGATGATGCACTTGTCCGGCTAGAGATGATCGCTATGGAAAATCCTGCAGACTTGAAGAAACAGTTGTATGTGGAATTTGAAGGAGAACAAGGAGTTGATGAGGGAGGTGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGAAATCTTCAATCCAGATATTGGTATGTTCACATATGATGAATCTACAAAGTTGTTTTGGTTTAATCCATCCTCTTTTGAAACTGAGGGTCAGTTCACTCTGATTGGCATAGTACTGGGTTTGGCTATTTACAATAACTGTATACTGGATGTACATTTTCCCATGGTTGTCTACAGGAAGCTAATGGGGAAAAAAGGAACTTTTCTTGACTTGGGAGACTCTCATCCTGTTCTGTATCAGAGTTTAAAAGACTTACTGGAGTATGAAGGGAATGTGGAAGATGATATGATGATCACTTTCCAGATATCTCAGACAGATCTTTTTGGTAATCCGATGATGTATGATCTAAAGGAAAATGGTGATAAAATTCCAATTACCAATGAAAACAGAAAGGAATTTGTCAATCTGTATTCTGACTACATTCTCAATAAATCAGTAGAAAAACAGTTCAAGGCTTTTCGGAGAGGTTTTCATATGGTGACCAATGAATCTCCTTTAAAGTACTTATTCAGACCAGAGGAAATTGAATTGCTTATATGTGGAAGCCGGAATCTAGATTTCCAAGCACTAGAAGAAACTACAGAATATGACGGTGGCTATACCAGGGACTCTGTTGTGATTAGGGAGTTCTGGGAAATTGTTCATTCATTTACAGATGAGCAGAAAAGACTCTTCTTGCAGTTTACAACAGGCACAGACAGGGCACCTGTGGGCGGACTAGGAAAATTGAAGATGATAATAGCCAAAAATGGTCCAGACACAGAAAGGTTACCTACATCTCATACTTGCTTTAATGTCCTTTTACTTCCGGAATATTCAAGCAAAGAAAAACTTAAAGAGAGATTGTTGAAGGCCATCACTTATGCCAAAGGATTTGGCATGCTGTAAAAAAAAACAAAAAATGGGAAGAAAAAGAAAATAAATTTAAAATTTTAATAAATATAACAAGAGGGATAAAATTGGTGGTGATAGTGTCCCAGTACAAAAAGGCTGTTAAATAGTGAACCACAGTAGTCACCTATGTCTGTGCCTCCCTTCTTTATTGGGGATATATGGGCTGGAACAGCAGATTTCAGCTACTTATATGAACAAATCCTTTATTATTATTATTTTTTTTTTTTTGCGTGAAAGTGTTACTTATTCTTTCACTTGTATGTACAGAGAGGTTTTTCTGAATATTTATTTTAAGGGTTAAATCACTTTTGCTTGTGTTTATTACTGCTTGAGGTTGAGCCTTTTTGCATATTTAAAAATACACACCAACAGACTCCCCTCCCAAGGAAAATATTACCACCATTTGTAGGCCATGTAACCTTCAAGTCTGTGCTATTTTTTTGTCCCTGTATCTAACTCAAATCAGGAGCTGTATTTTTTTTAAACAATTTGCTTTTGAAACTTGAAGTCTTGAAAACAGTGTGATGCAATTGCTGCTGTTCTAGTCCCCAAAGAGTTTTCTGTGCAAAAATCTTAAAATCAATAAAGATGGAAGGGAGAACTTGGAATGTTTAACTGCAGCCCTCAGAACTTTACTTTAGTAACAGCACAACAAATTAAAAACAACTCATGCCACAGTATGTTGTCTTCATGTGTCTTGCAATGAACTGTTTGAGTAGCTAATCCTCCTTCTTAGTATATGGAAGGACAGGGATTTGTTGTTGTTGTTGTTTTAAGTTTATTGGGGAAAAGTGCATTTGGCCAAAAGAAATGATAGTCAAACCCTTTGCAAGAAAGATAAGTTTGTTGTTTATTATAAGCGTAAAGCATGTGAAAGTGCACTTAAATTTTTTATTCTTTGCTTATTAACCACATTTTAAATAGACAATCCAAAGTCTTCCCTTCTTGTCGCCATCATCTTATCCAGTCAGCCATTTTATCAAGGCACATGATCAGTGTTGGAACATAGTGGAAAGAATGGCTATTGTGCCTTGTTTTACTTAATCATACAGTAAGCAGAGACTTGGAAATGAATGGAACTGTTACTCTTAAGTCCTATTTACATTGTCTGTCCCCAAAGATTAAAGTTTATTTCAAAAAGTGTTAAATACTACTTTCACGTACTATGGAAAAGTACAGGTAGATTTAAATTACTAGACATTCAGAAGCAAGTAGTTTCCCCTGTCTAGTCTTCTGTGTCTGTGATGTTTGTTTCTTTTACTGCAATATAAAATAAAAGGATTATGTATTTTTAACTGAGGAGAGACATATTGATATATCCTTTTACTACAAGTTACAGCTAATGTGCTGAGCTTGTACCTCGATTGTTTTAACTGACCATGACATTAGTTTAATGATTTGTTTGAAATTGGCAGGAAAAATACAGCTTTCAATCATCAGAAGGGGAAAGAGGATGTCTTTCAGAATTATTTTAGTTCTTTTAGTATTTGAGACTTAACTGTTATGTACCATAATGCTAAATAAAACAGTGACATTTTCCACCATAATTTAGTGGAAAAAGAAAACATTGCTTTCCGTATTGTGGTAAGGTAACATGGGGTTTTTCTGGGCCAGCCTTGAGAACACTGTTAAAAATATATACACTACCTTGATTCAAGGGACCCTCATGCTACTACAGTCACCTTAAGAGGCCTCTCATTCCTGTGCTTCTTGTGTATAATGAAAGTGAGAATACGAGAAATCAAATACTCTGGGGGCTTTTTGTATAATAAATTCGTGAAGAAATTTGTGTTCTTCAGTTCTCAAGTTTTATTATCACTATAGTATTGAAGTTATCCAATTGTAATCACATCTATGTGAAGTTTTTGAATGGTCATTGAGTACAGATCACCAGGTATAGAATTCATATCAAATAGACTTTTAACAAACAGTTGAAAATAAACCTACCCTTGAAAATATTCTAAGAGAAAAGTTCATTGGTTGTCCAGACTACTTGCTCTCACTTTCAATATCTGTTTGTCCTGGGCATATTACCACTTCTTTTCTCATTGCCTCCTTTCCACTACTGTCTACAAAATTTTCACTGAACAGTATCTTAAGCAAGAGGGAACAAATAGAAATTTTGACTACAGTGGTTACTCCCTCTATCCCAGATGTTAGGTTATAAAGTACTGTTTCTCCCAGATCACCAGGAAACTCTGGAGGAAATAAAAAACCGAAAACTAATTGGTTTTCCAGATGAAATACACAGTTTCTCCTACTACCATCATTATAGAATATCTCAAGCATACAGTAAAGACACGGCCTGTGACCAAACTTTTCTGGAGCCTGGTAGCTTTGGCCAATGAATTGGATTTCCTACCCTATACAACTTTACTGGGCTCTGCTTAATTGTGTGATAAAATCCAATGACAATTTCTGTAGCTTTACTTTGGGATACATACTAACTAAGGAGGGAGATACATGAAATCAAGCTTCAAACAAAACTTGCTGATGGTATTCATTTCCCTATCGGTACACATCCATCTTACTAGAAAGGAAGGATGAGTGTAACCTGGCACCATCACTCAAAGAACTGTGCTGGGATTTCAGGCCCTTTCAAGGGGTTTTCTCAAGACTTTCATGCAGACTCAGAGGAAGGGTAGTCTTCCTAAGGCTACTCCATCTGTAGTCATGATCCCCTTAACCTGTTTACCTCAAGTATCTTTTTTGACCTTCCACCAGCCTCTAAGGACCATCTCTTATATTCCTGCCCCTTCCCTGAGCCAATAGAGGATTCAAAATGCAACTTCCACTTCCTCTCTTTCCTTTTACCCACAGTGTTAGTGTATGGAGAATTTCCTGGGGAGTCTAGAGAAGTGCATTCTCAGTCTTTTCCTTCTTTACTGTTGATATCCGGTAGTTGGCATTTGTTAACCAATTGCAGGACGATTTCGGTGCAGATGTGCCCCTGTGAGAAATGCTTAAAACTTTTGCTATGCCACTAAAATACCTCTCCTGAAGGATTCTTAGAGTCTCCTCTTGAGAAACTCTGTTGCCAGTGAGAACCCTAACCTTGGCAGCACCCTGAACTTGGTTCAGCTGCTACCCTGTTCGTTTTTCAGTAGGGTGGATACTACTGTAATTCTAAAATTCTGACCTGTACTTAACCAGTTCTGTCGGGTAAACCTCAACCACTCAAAAAGGTTGTTCTCCAAAACCGTGTCTTCTGCTCAGACTCTACCCCCAGAATATCTTTCTGGTATCTTAAAATCAATACACTTCAAAATGGAACTTTTGTCTCTACCTATCATTTATTGTTCCTTAAAAACATCCCTCTTGACTCAGTCTTCAGAATCCCTCACCCTTCAATTGTCACAGCTTGTATCAATTGTTTTCCCCTCTCCTTCATCATACTTCCTTTCGACCTTGACAGTATTCTCCAAACTTTCTCATTCTTCCAGAACACAGTTTTGTTAATTTAAATATCCTTTGCTTCAAAACTTGTTCCCTGTTGAGGAAATCTGTAAGCCTGGTATCCGCAGCCCTCTGTAAGCTCAGTTCCACCTACATTTCCAATTCTGCCATCAGTTACAGGCATCTTTCCCTGCATCCCCACCCACATCATCATGCTGTGCTTAATCATTTCATATTTCTCAAGTAACCTTAAAGGCCAAAACTTTAAAAAGCCCCTCACCCATGAATTCATCAACCTCCAGAATGTCTCTGTAACCTAATAGCAACTTCATGGTAGTACATGCACATTGAGCAATGAGGAGTCACTGGGATTTTTGTTTTTTTCCCATAACCATTAACGTGGCATGTGGGCAGGTTCATGGGGAAGATTGTTTATCTTTGTTCTGTCCCATATAGTAGTTGTGTAATAACTTTGTTGAAAGGACGAGCGCTATTTTTTCCAGTACCTCGTCAGTCACCACCTGAATGATTGAAAATGACGGCTTGCCATTCAATGAAGCGTCTCTGTTCTCACCAAAGATAGCCTCTGTCTCTTGTCTCCTCGTTATCCTACCCCCAAAAGGTTTTATTTTAAAATATTTGAATATTTAGTGGCTAAAGAACTTGTTCCTGGAGGAAGTGAGTAACTGGTTCTGTCATTTCAGCCTGTGAAAAGAAAATTACTAAAAGGGAAAGGATGAAACGGACCAAGTCCTTGGAAGCAAGATTTCTGTGTGACTTCCCCAGTCCTCCTTTTCGGGATGTGCTCTGGCAACCTATAACCTCTGCGTGGTCAGCCGCTGTGGCTACACTCCTCTCCCGCTGGAGATGGGAGCAGGTGTCTTACGTCATCCTGCTGTTGCCAAACCCTCACATATCAAGGAGCTATCCTTGCTGAATGCTGTGTTTTCTGTAGTAAAGCACTCACCATGATGAATGCCTGGTTTGCCAAAACCTTGTAATTACTGCTACAAGTCAACCCTTAAGTTGGGATTCTTAGATTCAGCTGAACAGGACTGTAGAACAGGAATAATTATCCTGGCTATCTTTCAGTCTCCAGCAAACCACAGAAAATGCAATGGGCATGTGTCAGTGAGCAGTGCACAGTGACTGAGGGCACAGCCTTCAGAGTTGAATGATGGTCTCAGTTCTGTCTGGCCCTGCCCATCCTTTGGCTTGGATTAGCATATCCAAGCCTATGTATATCACTGATGGTTATCAAGACTCATTGAAGTTGAGACACAGGTGCTACCTGTTGCAAGACAGAAGAAGGAATTCATTGAGAGGTTGAAGATGTTTGTAATGATTTCTTTTGCAGGATTTGACCCTCCCTCATCTATCTCAAAATGCAGGAGGGGTGCTTTCTTTGATTTTTTTTTTTTTTTTAATTAGGATAATTCATATAACAATTCACTCCTTTAAAGTGTACAATTAGTGGCTTTTAGAATAGTCACAAAATTGTGTGTCACACTATATAATTCCAGGGCATCTTCACCACTGCAAAAAAAGAAAACCGCTTGTATCCATTAGAAGTGATTATCTTTTCCCACC EMBV3_36114 AGAGTCCGTTCAGGCCGCCCGGACCTGGGACAGTCGGCTTTTTACTTCTTTTCACTGAGA Gene GeneID:789893|LOC789893:XM_002694696:297_cdna Constitutive 0 NULL GeneID:789893 17 GENE LOC789893 NULL hypothetical LOC789893 EMBV3_00465 ACGTTAAAATCGTGTTGTACAAGTTTATAATTGTTTACTTGTTGTAGATGATACTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_34150 TCCATCTCAGGCTGATCTTGACACCTCTCATGTTCTGCTCACTTCAATCAGACCTCTCTG Gene BVV0102_059385 + 0 NULL GK000030.2:141047532-141075571 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248566 1 XLOC_151635 Coding TCONS_00248566 XLOC_151635 Coding Coding TLR7 X:141042147-141064699 o TSS185871 6713 1 TCONS_00248566_10 1050 0.0987635930284523 3 0.702452219413773 7.5580943832995e-05 1.73503127847938e-26 3.45643035171936e-27 9.22083066776051e-05 3.92563288144199e-06 3.55831385699338e-23 3.89799211203972e-05 1.2041226066309e-17 5.23722311229038e-17 3.5992891480265e-05 0.000297249224197063 7.65352878820965e-05 9.89180291992328e-05 2.98075784829123e-19 3.84169062590389e-06 8.34724976016554e-20 0 0 1.29653457821978e-16 2.32734951471541e-18 1.13721058312696e-17 3.99501104437858e-21 1.13961313294696e-05 3.59072023523752e-13 5.46897279503425e-40 0.00025899075832229 9.88290294833645e-12 7.91428108467039e-05 5.7449043733606e-05 5.68981432286924e-05 XM_005228486.1 TLR7 PREDICTED: Bos taurus toll-like receptor 7 (TLR7), transcript 0.0 8395 100.00 0.693281692238939 NM_016562.3 TLR7 Homo sapiens toll-like receptor 7 (TLR7), mRNA. 0.0 4307 85.43 0.558170713540891 TCONS_00248566_10 sp|Q9NYK1|TLR7_HUMAN TLR7_HUMAN Toll-like receptor 7; 0.0 1805 86.48 0.999047619047619 0 coding 1 0 0 0 -0.0951175449880519 0.476433114809875 -0.0180070991495819 0.718919042499201 TTGGAGAAGGAAATGGCAACCCACTCCAGTATTCCTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGCAGGCTACAGTCCATGGGATCTCAAAGAGTCAGACACATCTTAGCAACCAAACAACAAAATATGTGAGAAAGCTATTAATTTTTATGTATTATTTGCATGGCAAAGTGGTATGATAAGAAGGCATTTAATTTTTGCTTGTGTGAATATCATTTACATGGTATGTGACCTGAGGAGAGTCCAGTATCTTTTCTGCATTAATTCCATTATTTGTAAAAAAAAAAAAAAAATTTAAGGCTAAGAAGATATTTCTTCGTTCTTTTTAGTAGTCAATGAAATAATACATATTATGCAGTTAGAACAGTCCAGTTCAAAATAAACTCCCAGTAAAGATCATTTATTATTGTATCTAGTAGTTTTTCAGCTGACCTAGGGCACTGCTTGCTTTTCAATCCAGTAGATATCACTGATGGTTAGCAACTGGTTTTCCTGTGGCACTCTTGGCAATTTTCAAATTCTCTCTGGATCGACTAGGTGGACTTTTAAACATAACCACCGATATTTTGACTCTACCCCCTAAAAGGCCCAGTAATCACTTCAGAAGGGAATGAGTCTCCCAGAAACCCCACTTTGAGAAACGGTTTTACCTGACCCTGGACTGCGAGTATAGCTGCCCTCATTTCACCCAAGTGAGAGAACCAAGTCTGCCCCTGCTTAGAAACCAGAGTCCCTTTCAGCTGAGCCTAAGAGAGAACAAGGGAAATGTAGACACGTCTCAAAGATACCTGTAGAATGACGGTTCTCAGTCAGGGGCAGGGGCTGTGTTACAATGTCTAGAGACATCTGTGATTGTCGAGGGGCAGTGTGGCTGGCATCTCGTGGGCTGAAGTCAGGGTTGCTGCTCAGCCTCTTACAATGCCACAAAGATGTAGCTCACCAGAAATGGCAGGAGTGCGCCAGTTGAGAAACTTCTAGAAAAAAACATCAGCCAGCCAAGTTGCTTGAATTTAGACATGAGGTTTCCCTGACTGTGGTGGTAGAAATAAAAGGAACCTGCTGCTTCTGCAAACCTCATGTCTGAGATGGCATAAATAGTCACACTCCTCCCCCTACCCCCTAACCAGTCTTTGCACTTAGAAAGTTCACGACTGGCAGCCTGGAGTCTCCATGACTTAGGTAGGTTTTCCACAGCTCATCTCTTCACCTCAGAAGACTCCAGACCTGGACTCACTCCATGCAGCAAAGAAAGTTGATGCTACTGGGTCCATCTCAGGCTGATCTTGACACCTCTCATGTTCTGCTCTCTTCAACCAGACCTCTCTGTTTCATTTTGGAAGAAGACTGAAAATGGTGTTTCCAATGTGGACATTGAAGAGACAGTTTCCTATCCTTTTTAACATGATCCTAATTTCTGGACTCCTTGGGGCTAGATGGTTTCCTAAAACTCTGCCCTGTGATGTCACTCTGGATGCCCCAAATACCCATGTGATTGTGGACTGCACAGACAAGCATTTGACAGAAATTCCTGGAGGTATTCCTGCCAATGCCACCAACCTTACCCTCACCATTAACCACATAGCAGGCATCTCTCCAGCCTCCTTTCACCGGCTGGACCATCTGGTGGAGATCGATTTCAGATGCAACTGCGTACCTGTTCGACTGGGGCCAAAAGACAACGTGTGCACCAAAAGGCTACAGATTAAACCCAACAGCTTTAGCAAACTCACGTATTTAAAATCTCTTTACCTGGATGGAAACCAGCTTCTAGAAATACCTCAGGATCTTCCTCCCAGCTTACAGCTGCTGAGCCTGGAGGCCAACAACATCTTTTTGATCATGAAGGAGAATCTAACAGAACTGGCCAACCTAGAAATACTCTACCTGGGCCAAAACTGTTACTATCGTAACCCTTGTAATGTTTCATTTACTATCGAAAAAGATGCTTTCCTAAATATGAGAAATTTAAAATTGCTCTCCCTAAAAGATAACAATATCTCAGCTGTCCCCACTGTTTTGCCATCTAGTTTGACAGAACTCTATCTTTACAATAACATCATTACAAAAATCCAAGAAGATGATTTTAATAACCTCAGTCAACTACAAGTTCTTGATCTGAGTGGAAATTGCCCTCGTTGTTATAATGTTCCATTTCCTTGCACACCCTGTGAAAATAATTCTCCCCTACAGATTGATCCAAATGCTTTTGATGCATTGACAGAATTGCAAGTCTTACGTCTACACAGTAACTCTCTACAGCACGTGCCCCAAAGATGGTTTAAAAACATTAACAAACTTAAAGAACTAGATCTTTCCCAAAACTTCTTGGCCAAAGAAATTGGGGATGCCAAATTTTTACATCTTCTTCATAACCTTGTCAACTTGGATCTGTCTTTCAATTATGATCTTCAGGTCTACCATGCAGTTATAAATCTATCAGATGCATTTTCTTCACTGAAAAAATTGAAAGTTTTGCGAATCAAAGGCTATGTCTTTAAAGAGCTGAATAGTTTAAACCTCTTCCCATTACATAATCTTCCCAATCTTGAAGTTCTTGATCTTGGCACTAACTTTATAAAAATTGCTAACCTCAGCATTTTTAACCAATTTAAAACATTGAAATTCATAGATCTTTCAGTGAATAAAATATCACCTTCGGGAGATTCACCTGAAGGTGGTTTCTGCTCTAACAGGAGAACTTCTGTAGAAGGCCATGGGCCCCAGGTCCTTGAAACACTGCATTATTTCAGATATGATGAGTATGCAAGGAGCTGCCGGTCCAAGAGCAAAGAGCCTCCTTCTTTCTTACCTCTTAATGAAGATTGTTATATGTATGGACAGACCTTGGACCTTAGTAGAAATAATATATTTTTTATCAAGCCTTCTGATTTCCAGCATCTTTCTTTCCTCAAATGCCTAAACTTATCAGGAAATAGCATTAGCCAGACGCTTAATGGAAGTGAATTTCAGCCTTTAGTGGAGTTGAAATATTTGGACTTCTCTAACAATCGGCTTGATTTACTCTACTCAACTGCATTTGAGGAGCTGCACAACCTGGAAGTCCTAGATATAAGCAGTAACAGCCATTATTTTCAATCAGAAGGAATTACTCACATGCTAAATTTTACCAAGAACCTCAAGGTTCTGAGGAAACTGATGATGAACTATAATGACATTGCTACCTCCACCAGCAGGACCATGGAGAGTGAATCTCTTCAAATCCTGGAGTTCAGAGGCAACCATTTGGATATTTTATGGAGAGATGGTGATAACAGATACTTAAAATTCTTTAAGAATCTGCTAAACTTAGAAGAGCTAGACATCTCTGAAAATTCTCTGAGTTTCTTACCTTTGGGAGTTTTTGATAGTATGCCTCCAAATCTAAAGACTCTCTCCTTAGCCAAAAATGGGCTCAAGTCTTTCAGTTGGGAAAGACTACAGAGTCTGAAGAATCTAGAAACTTTGGACCTCAGCTTCAACCAGCTGAAGACTGTCCCTGAGAGATTATCCAACTGTTCCCGCAGCCTCAAGAAACTCATACTTAAGAATAATCAAATCAGGTGCCTGACAAAGTATTTTCTCCAAGGTGCTTTCCAGTTGCGACATCTGGACCTCAGCTCAAATAAAATTCAGGTTATCCAAAAGACGAGTTTTCCAGAAAACGTCCTCAACAATCTGAACATTTTGTTTCTGCATCACAATCGATTTCTGTGCAACTGTGATGCTGTGTGGTTTGTCTGGTGGGTTAACCATACCGAGGTGACTATTCCTTACTTGGCCACAGATGTGACTTGCATGGGACCAGGAGCACACAAGGGCCAGAGTGTAGTCTCTCTGGATCTATATACCTGTGAGTTAGATCTGACTAACTTCATCCTGTTCTCACTTTCCATATCAGCAGTTCTCTCTCTGATGATGATCACAATAGCAAACCATCTCTATTTCTGGGATGTGTGGTATAGTTATCATTTCTGTAAAGCCAAAATAAAAGGGTATCGACGTCTGATATCACCCAATTCTTGCTATGATGCTTTCATTGTATATGACACTAAAGACCCAGCAGTGACAGAGTGGGTTTTGGACGAGCTGGTGGCCAAATTGGAAGACCCGAGAGAGAAGTGTTTTAATTTATGTCTTGAGGAAAGGGACTGGTTACCAGGGCAGCCTGTTCTGGAAAATCTTTCCCAGAGCATACAGCTTAGCAAAAAGACAGTGTTTGTGATGACAGACAAGTACGCAAAGACTGAAAATTTTAAGATAGCATTTTACTTATCCCATCAGAGGCTCATGGATGAAAAAGTGGATGTAATCATCTTGATATTCCTTGAGAAGCCCCTTCAGAAGTCCAAGTTTCTCCAACTCCGGAAGAGGCTCTGTGGCAGTTCTGTCCTTGAGTGGCCAACAAACCCACAGGCTCACCCGTACTTCTGGCAGTGTCTGAAAAATGCCCTGGCCACAGACAATCACGTGACCTACAGTCAGGTGTTCAAAGAGACAGCCTAGCCCTTCTTTGCCGAATGTGACTGCTACCAAGGAGAAGCTTGGCTGCCTTGATAGGCTCACCCATGTGTTGCCAGAAGAGCGTTTTAAGATTCTTCAAGCCCTGGGATTGCCCATATTGGAGAGGAGTCACCAATACATGACAAAGGAAGTGGAAAAATGGGATTTATATAAGCATCAAGTCATCTTTCTCAGCTCTCTGTGTCTCCATTTGCACTTGAGTCTTTGTCTTCTGCCCTTGCATAAAATACTGTTGGGAGAAGGGTGGCAAGTAGAGGATGTGGGACTTTGATTCTCCTGTAATTGTGATTATTTCACATACACACAGTCACCAAGAACTGCACTTCTACCCTTAAGAGGCACTGGTATGTATAGAAATAGGGTTAAAAAAAGGCTCAGAGTCTGCTTATATGGCATTAAAATGTACCAGTTAATTAGTGGTAAAAATAAAGACACAGTTAACTCTTCAGCCAATTGACTCAACCATCTAGTGCCCCGTTCTGTGCAGACCATGTGCTGGCCCCCAGCAGGTGGTTGCAGCTCAAGTGCTCCTTGCTCTTTCTCTCCTGGGCCTGTTATTGGGCTCTTTGGGGAAACAGAAACATCTTTGTCATCGATGGATATAGTCTACTTACAAGTGGGAGAAGAATAAAGCACTCTGTATGCAAAGTCATGCTCTTTACTTTTGATGATAATTTACCTGCTTAAATATGGCTCTGGACTAAATGTTTCTCTCCCCCCAGGTTCATACGTTGAAATCCTAATATCCCAATGTGATGGTGTTGGGAGGTGGGGTTTTTAGGAAGTGGTTAGGTCATGAGACTGGAGCCCTCGTGATGGGATTACTGCCTTAGAGGAAGCAGTCAGGAGACTAACTTGCTGTGTTCCCACTGTGTGAGGGTATGGAGAGAGGCTGCCAGTCTATAACACACAAGAGGACCCTCAGCAGAACCAGATCACGTTGGCATTCTGATTTCCTCCAGACTGGCTTCCATGCTTCAGACTTGTGAGAAATAAATGTTTGTTCTTTAAGCCATGCAGTTTGTGATGTTTTGTTACAGCAGCCGATTTAAGACAGATTTTTTTTATCTGCATGGCAAAGTACTGTTTCCAAGGAAAAGTTGCCTCATCCGAGGATCTTTCAAACTGCTTTATTAACTTATACTGCATACTTGTAATTATCTGAAAACTTGATCCATCAATGTCAGACAGCTTTGATGATAAACTCTAAAGGAGAACCCCAAGAGCATATATTTATTTAGAGTTAGCAAGCAGGGATGACAGTCACATGGATTCCTTTAAATTTGGAGGCTGGGGGAGGAACAGAGGTTTACCACCATTAACACTGAGAAAGCTTGAGTCTTGAACTTTGGCTTCAGTACTCAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAACACCAGAAAGAACCAAGATGTTCTGAAGACACATACTTTCTAAGTGTGTATAAATTTGCATGAGTCCAAAGTCTGAAATGTGACCTGTTTGTTTTTATTTCATGAAAAAAGTTATCTACAGAGGTGTCTGTGCCCTTTAGAAGATAGCTTCAAATCCCAGACTTCAAATTATCTGGGAGATAACTGTGTTTTCTTCATATATGGAAAAGACAAAGGTTTTACTCTGAGGATGGCTATATGTATTATTTCCAAAGGACATGTAATCAATAAGGGTCACAAACTCCCAAATTAATCTCTGGAATCCACAGAGCCAACGATCTGAGCCTCAGTAAGCTAGATTGTACTTCATAGGTGCTTATGTGAAAACAAAGATAACGTCATAAAAATTGGCTGTTGGCATCATAAATTTCTTCTATTAAAGCACATAACTATACAAGGTTTAAGTTATTTTGGTGATTTATAAACCATGAAGCACTTGAAGACAAACATCTTCTGAAATGAATCAAGAGGAAGGGAAACTGACAACAACACAACTCAGAAACCACAGCATATTTCAACACGAGGTTGTGCACAGTGGTTTGTTGTAGGAAATGACCCAAAGCACAGTAACAGATGGTTTTCATTTTAATTCCTTTGTATCTTGACAAGTCACTCTTTTAATCTCCTGAGGGTCCTCTGTGGAGTCCTGTACCATTAGAGCCATTCATAGATGGCTTGGATCGAAAGCCAACAACTCAGGCCACCAGGAAAACATGACTGCTAGGTCCCCTGCCAAGCTCTGAGTGGGGAAG TCONS_00248567 s 5' 0 TCONS_00248567 s 5' 0 EMBV3_18285 AGGATGACGTGTACAAGCAGGGCAAGCTGAACCTGCCGCCTTCCAGCCTGAAGCTCAACA Gene GeneID:538124|ANKMY1:XM_002686615:129_cdna Constitutive 0 NULL GeneID:538124 3 GENE ANKMY1 NULL ankyrin repeat and MYND domain containing 1 EMBV3_36727 TGAGTCAATAAGCAAGAGGAGTTACTGGCTGGAAGAGGGAGAGGAAGTGGGAGATGGTAG Gene BVV0102_431767 + 0 NULL GK000009.2:43496018-43523813 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08709 CCAGGTGATTCTAATGCCCCAGAGATTGTGAGCTGGTGGTTCCTGAATAAGCCGGGGAAT Gene GeneID:617894|RHOF:NM_001040602:288_cdna Constitutive 0 NULL GeneID:617894 17 GENE RHOF MGC128150 ras homolog gene family, member F (in filopodia) EMBV3_10057 GCATTTATCAGGGTCACTGTCTTTGCTTCAGGACCTTCTTCCTTCCACCCTCACAGCATG Gene BVV0101_026103 + 0 NULL GK000012.2:31503973-31678404 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16230 GTGACCTGCCACAAGTTACTCAACCCTTCTGTGTCTCAGTTTTCATATCTGTAAAGGGGG Gene BVV0102_179527 - 1 EMBV3_08068 GK000003.2:14117839-14130239 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39841 TCCTCAGTGGACAGCCAGGACTTGCCAGAGGTATTTCCCAGGTGGTGAAGGACCACGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36116 GAATCCTCAGCTACAGAATCCAGAAGTTAGATTTCAGCAGCAACTGGAACAGCTCAGTGC Gene GeneID:783466|LOC783466:XR_084068:33_cdna Constitutive 0 NULL GeneID:783466 25 PSEUDO LOC783466 NULL similar to ubiquilin 1 EMBV3_22634 CAATTCAGTATTAAATCAGCTGGGATGATTACTGTTCTCTCCATTCCTTTGGGGTGACTC Gene GeneID:327674|COX7B:NM_175795:2_cdna Constitutive 0 NULL GeneID:327674 X GENE COX7B MGC128465 cytochrome c oxidase subunit VIIb EMBV3_43500 GGTGACCTGTTCAGTTTGCTGCTATCTCTTGTCACGGAGAGAACTCCTCTAGATGTAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37819 GCACTTTTATCAAGTGCCTCTGTGACCTTGAAAACTGGAAATTTATGTTCTGCCATTCTG Gene BVT0102_144120 + 0 NULL GK000008.2:100277766-100295619 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37129 GCGTTGCTTCATGCTCCTCTGACCCCAGGCCCCTGCTTCTATTTCTAGGAGTCTAATAAA Gene GeneID:540265|TRIM41:XM_002689053:23_cdna Constitutive 2 NULL GeneID:540265 7 GENE TRIM41 NULL tripartite motif-containing 41 EMBV3_19927 GCTTGGGGTGAGTGTAGTTCTGGGCTAGCAGCACTCTTGCGGCTTGTTCTAGTGTGTATT Gene GeneID:535109|PACSIN3:XM_002693538:154_cdna Constitutive 0 NULL GeneID:535109 15 GENE PACSIN3 NULL protein kinase C and casein kinase substrate in neurons 3 EMBV3_20881 CGTGCTATGTCCTAACTCCCTAAACAGCTTTGGGCAAAGCTATTTTCCTTAAGCCCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14372 TGGAAGAGATTGACTGCACCGAGGAGGAGATGATGGTGTTTGCAGCCCTACAGTACCACA Gene GeneID:525159|FERMT3:NM_001037606:42_cdna Constitutive 0 NULL GeneID:525159 29 GENE FERMT3 MGC128660 URP2 fermitin family homolog 3 (Drosophila) EMBV3_29645 CCATCCTCAGGGTCAATTTACAATCCACGTTGGCCACCAAATTTCTGCCATTTTGCCCTC Gene BVT0102_186700 + 0 NULL GK000027.2:20056664-20233577 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155192 TCONS_00155205 TCONS_00155196 TCONS_00155201 TCONS_00155194 TCONS_00155197 TCONS_00155193 1 XLOC_094665 NonCoding TCONS_00155192 XLOC_094665 NonCoding NonCoding - 27:20062567-20146893 - TSS116175 711 2 TCONS_00155192_2 40 3 0.991603913430181 0.000641482318130195 1.01436734845098e-60 0.00147662700697498 0.000373779911056699 0.00110596725209226 2.23756617087935e-12 0.000349089510131798 9.54739842274405e-05 0.000292279033464598 1.48257087139832e-44 0 1.63622604287462e-10 8.27396430656986e-24 6.67867113983948e-97 1.24761357820767e-169 0 0 0 0.000384070859572635 0.00104718871735161 0.000144613011346211 0 0 0 0.00370432123081046 7.6697950675269e-06 0.000792693053405567 2.17988423778882e-25 5.10308999466348e-32 0 XR_230039.1 LOC101908557 PREDICTED: Bos taurus uncharacterized LOC101908557 (LOC101908557), 7e-90 334 100.00 0.258790436005626 0 noncoding 0 0 0 0 -1.14672400151429 0.0142807627025175 -0.00186424092173633 0.975171897684352 GGGTGACTATGGGGTCAAAGGGATAAGCTGAGAGCTAAGTGTAAAAAGAAAGGGAGCCCAGAAGGGAGGGGGCTGGGTGGATGGATGGGTGGGTAGAAGGAAGAGAAGAAGGAAAGAAGAGAGACCTCAGGAAGCAAGTCTGCTCATCACGGCTTCATTATACACCGAACCTTCTGAGTTAGAAGGAAAAAGAGTCTGGAGCATACCATCAAGACTGTGAAGTTTCCAGAGTCCCCAGGACTCAAGATCCTTCCATCTTTCTGTCTCACCTGCTAGCCTGTGACTTCCATCCTCAGGGTCAATTTACAATCCACGTTGGCCACCAAATTTCTGCCATTTTGCCCTCAGTCCAGGAAGCAGTTTGTAACATCCTGAAACTAAAGTGCTTGCTGACTGCCAACCACTTTTCTAACTGAAGCCAGATTTCACTCAACAAATAGTAGAGAAGATGAAAATATCAGCGGAGAATTAAACTTGGGGTATTGCAAAGGTTTTCTGTCAGTTCTCATAAGCATCTGAAAAAGGAAGCAAAATTTAACCAGTCTCCAGTTTTCTTGAAGAGGATACATGCATTGTTCCCAAGTACTTTAAATGTCTCTTTGGATTAAACGCTCAAATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATATTAGTACATATTTTCCCTGATAAGATCAGAGCAGTTGACCTAATTCAGGACAGAAAC TCONS_00155191 s 3' 5905 TCONS_00155191 s 3' 5905 EMBV3_19760 TCAAGCCTTCGTTGATGACAACTTGGGGAAACTGAGTCACGGGAGCACACACGACCTCTT Gene BVT0102_279831 + 0 NULL GK000007.2:45337372-45354485 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33756 CCCAGGGCTACGAGAAGTCGCTCAGGGCAATTTTTGAAGATGCTGGTTATCTGAAGACAT Gene GeneID:508713|GNPTG:NM_001017428:99_cdna Constitutive 2 NULL GeneID:508713 25 GENE GNPTG NULL N-acetylglucosamine-1-phosphate transferase, gamma subunit EMBV3_26366 CGGCTGTGGAAAAGACTCGATGGAAGACACAGAGTAATGTTGAAATATGGAATGGCCCGG Gene GeneID:505479|LOC505479:XR_083677:511_cdna Constitutive 0 NULL GeneID:505479 5 PSEUDO LOC505479 NULL similar to Grp94 neighboring nucleotidase EMBV3_09821 TGTGTGGATATGAGTCCTGCACAAATCTCTTCTTCCACTCTGTGGCCTGCTTTTCCACTC Gene BVV0101_056042 + 0 NULL GK000019.2:44458078-44486053 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41487 CTGGCGCTCGGGCATCATGGAAGAGCATCTCCTGGAGCCCAGGGATGAGGTGGTCCAGGC Variant GeneID:534311|TOR2A:NM_001083476:160_cdna 783^863 2 EMBV3_11587 GeneID:534311 11 GENE TOR2A MGC140387 Torsin-2A torsin family 2, member A EMBV3_09003 TTGACGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTTTTCAGTAACCAAAAAAAAAA Gene GeneID:506260|LOC506260:XM_002699225:31_cdna Constitutive 0 NULL GeneID:506260 29 GENE LOC506260 NULL similar to Rho GTPase-activating protein EMBV3_18793 AGTGGCACCTGATCTTTCTAGCTGGACTACTTTGAGTGGCTTATCCTGCCTCAGTAGGAG Gene GeneID:517459|GABRP:NM_001015618:14_cdna UTR3_Alt 2 NULL GeneID:517459 20 GENE GABRP NULL gamma-aminobutyric acid (GABA) A receptor, pi EMBV3_24113 GTGTGTTATTTCCGTTTTGACTCTCTGAAATAGTTACATCCCTGCCCCCCAAATCAGGGC Gene BVV0102_039435 + 0 NULL GK000022.2:39134229-39174993 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128553 TCONS_00128555 TCONS_00128554 TCONS_00128560 TCONS_00128558 TCONS_00128556 TCONS_00128561 TCONS_00128559 TCONS_00128557 1 XLOC_077916 Coding TCONS_00128557 XLOC_077916 Coding Coding PTPRG 22:39172900-39705910 j TSS95877 6759 1 TCONS_00128557_6 1324 0.024263944370469 30 0.987375447694129 0.00127789540064588 0.000559834316905853 0.00196995913803607 0.000280354647195997 0.000680832450574602 2.49391361037343e-15 0.000445621404617952 0.000900493151782506 0.000558457358310768 0.000129626620490318 5.53225274729637e-05 9.26218290873215e-06 1.61958303748076e-13 0.000388495724329142 0.000182810914833021 6.52268686488209e-07 9.96323717469601e-18 4.83629741636321e-38 9.76958189180717e-06 0.000264834549866954 0.000150863348277301 6.3227794179085e-05 4.4028486466972e-09 4.47880116629634e-09 0.00275111723208727 0.00097464233810207 2.70109602530251e-13 8.94189209268869e-05 3.13818612436515e-11 1.38113533496322e-05 NM_001076228.1 PTPRG Bos taurus protein tyrosine phosphatase, receptor type, G (PTPRG), 0.0 4581 99.96 0.37609113774227 NM_002841.3 PTPRG Homo sapiens protein tyrosine phosphatase, receptor type, G (PTPRG), mRNA. 0.0 6805 85.95 0.858263056665187 TCONS_00128557_6 sp|P23470|PTPRG_HUMAN PTPRG_HUMAN Receptor-type tyrosine-protein phosphatase gamma; 0.0 2564 94.29 0.999244712990937 3 coding 1 1 1 1 -0.463107720010408 0.121584091961669 -0.050083758643091 0.520143525400146 CATACTCCTCAGGGAGCGAAGATGACTTAGGCCGCCATGTCTTGCCCTCTGTGTACTGCTCGAGTTGGGGTGTCACTCCAGGACCTTGCTTCAGACCTCTCAGGTGTTAGTAGTGAGCTACATTGAAGTGAGATGGTTTACTTACACTACAGAAAAGTCGTACTGCTAACCAGGTGCCTACGGTCCTGAGTACTGGGTCACGTCCAGTGTCAGCTGTGGGGGCCGTCAGCAGTCACCTATTGACATTTCAGACCAGCACGCACGCGTCAGTGAGGAGTACCAGGACCTGCAACTCGATGGCTTCGACAACGAGTCTTCTAACAAAACCTGGATGAAAAACACAGGGAAAACAGTTGCCATCCTGCTGAAAGACGACTATTTTGTCAGCGGCGCTGGCCTGCCTGGCAGATTCAAAGCTGAGAAGGTGGAGTTTCACTGGGGCCACAGCAATGGCTCTGCCGGCTCTGAACACAGTGTCAACGGCAGGCGGTTTCCCGTGGAGATGCAGATTTTCTTTTACAATCCAGATGATTTTGACAGCTTTCAAACCGCCATTTCTGAAAACAGAATAATCGGAGCTATGGCTGTATTTTTTCAAGTCAGTCCAAGGGACAATTCTGCACTGGATCCTATTATCCACGGGTTGAAGGGCGTCGTCCATCACGAGAAGGAGACCTTTCTGGATCCTTTCATCCTCCGGGACCTCCTGCCTGCATCCCTGGGCAGCTATTACAGGTACACAGGTTCTCTGACGACCCCACCGTGCAGCGAAATTGTGGAGTGGATAGTGTTCCGGAGGCCCGTCCCCATCTCTTACCATCAGCTCGAGGCTTTTTATTCCATCTTCACCACGGAGCAGCAAGACCACGTCAAGTCAGTAGAGTATCTGAGAAATAACTTCCGGCCACAGCAGGGCCTGAATAACAGGGTGGTATACAAGTCTGCCATTCGTGACGCCTGGAACCACGACATGACGGACTTCTTAGAAAACCCACTGGGGACGGAAGCCTCTAAAGTCTGCAGCTCCCCGCCCATCCACATGAAGGTGCAGCCGCTGAACCAGACGGCGCTGCAGGTGTCCTGGAGTCAGCCGGAGACCATCTACCACCCGCCCATCATGAACTACATGGTGTCCTACAGCTGGACCAAGAACGAGGACGAGAAGGAGAAGACATTCACCAAGGACAGCGACAAGGACTTGAAAGCCACCATCAGCCACGTCTCCCCTGACAGCCTTTACCTGTTCCGGGTCCAGGCCGTGTGTCGCAACGACATGAGGAGTGACTTCAGCCAGACCATGCTCTTCCAAGCTAATACCACTCGAATATTCCAAGGGACCAGAATTGTCAAAACAGGAGTGCCCACAGCATCGCCGGCCTCTTCAGCTGACATGGCCCCCATCAGCTCAGGCTCTTCCACCTGGACATCCTCCGGCATCCCCTTCTCCTTTGTCTCCATGGCGACTGGGATGGGCCCATCGTCCAGCGGCAGCCAGGCGACCGTGGCCTCCGTGGTCACCAGCACGCTCCTGGCCGGCCTGGGCTTCAGCGGCGGCGGCATCTCCTCCTTCCCCAGCACTGTGTGGCCCACGCGCCTGCCTACGGCCGCCTCGGCCAGCAAGCAGGCCGGCAGACCCGTCCTGGCCACAACCGAGGCCTTGGCCAGCCCGGGCGCCGACGGCGATTCAGCGCCCAGCAAGGACGGCGAGGGCGCGGAGGAGAGCGAAAAGGACGAGAAGAGCGAGAGCGAGGACGGCGAGCGGGAGCACGAGGAGGAAGGCGAGAAGGACTCCGAGAAGAAGGAGCGGAGTGGGGTGACCCACGCCCCGCGGGCGCGCAACCACACCCAGCCCACCGCTGCGCCCTCGGCCCCCGGCACCGCTGCCCAGGAGGGCGCGCATCAGACTACATCCGGGCGCGAGCGGGCCCGCACTGCCATCCCCACCGCCCGGCCCCAGGACGCCCTGGACCCCCTCTCGGTCACCCCCACCCAAGTGCCCCCCACAGTCACAGAGGAGCAGGACGAAGACAGTTATCCTGCGAGGCCCGAGATGCCATCCAGGAAGCCCGTGCCCCCAGGGGACCGGTTTCCCGAGGACAGCAGGTTCATCACTGTTAACCCAGCAGAGAAGAACACCTCTGGGATGATAAGCCGGCCTTCCCCAGGGAGGATGGAGTGGATCATCCCTCTGATTGTGGTGTCAGCCTTGACCTTCGTGTGCCTCATCCTTCTCATTGCTGTGCTCGTTTACTGGAGAGGGTGTAACAAAATAAAGTCCAAGGGCTTTCCCAGACGTTTCCGTGAAGTGCCTTCTTCTGGGGAGAGAGGAGAGAAGGGGAGCAGAAAATGTTTTCAGACAGCTCATTTCTATGTGGAAGATAGCAGTTCACCTCGGGTGGTCCCCAATGAAAGTATTCCAATCATTCCTATTCCGGATGACATGGAAGCCATTCCTGTCAAACAGTTTGTTAAACACATCGGTGAGCTCTATTCTAATAACCAGCATGGGTTCTCCGAGGATTTTGAGGAAGTCCAGCGCTGCACGGCTGATATGAACATCACTGCAGAACATTCCAATCATCCAGATAACAAGCACAAAAACAGATACATCAATATTTTAGCATATGATCACAGTAGGGTGAAGTTAAGACCTTTACCAGGAAAAGACTCTAAGCACAGCGACTACATTAATGCAAACTATGTCGATGGTTACAACAAAGCGAAAGCCTACATCGCCACCCAGGGACCGTTAAAGTCCACGTTTGAAGATTTCTGGAGGATGATTTGGGAACAAAACACTGGAATCATTGTCATGATTACGAACCTTGTGGAAAAAGGAAGACGAAAATGTGATCAGTATTGGCCCACCGAGAACAGTGAGGAGTATGGAAACATTATTGTCACCCTGAAGAGCACAAAAGTACATGCCTGCTACACTGTTCGTCATTTCTCAGTCAGAAATACAAAAGTGAAAAAGGGGCAGAAGGGAAATCCCAAGGGGCGGCAGAATGAACGTGTGGTGATCCAGTACCACTACACACAGTGGCCCGACATGGGGGTCCCGGAGTACGCCCTCCCAGTGCTGACCTTCGTGAGGAGGTCCTCGGCAGCCCGCACGCCGGAGATGGGGCCTGTGCTGGTGCACTGCAGCGCTGGTGTGGGCCGGACAGGCACCTACATCGTCATTGACAGCATGCTGCAGCAGATAAAAGACAAAAGCACAGTCAACGTCCTGGGGTTCCTGAAGCATATCAGGACTCAGCGCAACTACCTCGTCCAGACTGAGGAGCAGTATATTTTCATCCACGATGCCTTGTTGGAAGCCATTCTTGGAAAGGAGACTGAAGTGTCTTCCAGTCAGCTGCACAGTTACGTTAATAGCATCCTCATACCAGGAGTAGGAGGCAAGACACGACTGGAAAAACAGTTCAAGCTGGTCACACAGTGCAATGCAAAATATGTGGAATGCTTCAGTGCTCAGAAAGAGTGCAACAAAGAAAAGAACCGAAACTCTTCAGTCGTGCCATCTGAACGTGCTCGAGTGGGTCTTGCACCGTTGCCTGGAATGAAAGGAACGGACTACATTAATGCTTCTTATATCATGGGCTATTACAGGAGCAATGAGTTTATTATAACCCAGCACCCTCTGCCACACACCACCAAGGACTTCTGGAGGATGATTTGGGATCACAACGCGCAGATCATCGTCATGCTGCCGGACAACCAGAGCTTGGCTGAAGATGAGTTTGTGTACTGGCCCAGTCGAGAAGAATCCATGAACTGTGAGGCCTTTACCGTCACCCTTATCAGCAAAGACAGACTGTGCCTCTCTAATGAAGAGCAAATTATCATCCATGACTTCATCCTTGAAGCTACACAGGATGACTATGTCCTCGAAGTTCGACATTTCCAGTGTCCCAAATGGCCCAACCCGGATGCCCCCATCAGCAGTACTTTTGAGCTTATCAACGTCATCAAGGAAGAGGCCCTGACAAGGGATGGCCCCACCATCGTCCATGATGAGTATGGCGCGGTTTCAGCAGGAATGTTGTGCGCTCTCACCACCTTGTCCCAGCAACTGGAGAATGAAAATGCCGTGGATGTGTTCCAGGTTGCAAAAATGATCAATCTGATGAGGCCTGGAGTATTTACAGACATTGAACAGTACCAGTTTGTCTACAAAGCGATGCTCAGCTTGGTCAGCACTAAAGAGAACGGAAATGGCCCCATGACAGTGGACAGAAACGGCGCTGCTCTCACCGCGGACGAGTCGGACCCTGCCGAGAGCATGGAGTCGCTGGTGTGACTGGAAGCGTGAAAGAGTGCTTCATTTGTAAACCTTCTGAAGACTGAGAACTTTCTTGAGGCCTTTTTTTTGCCAGACTCTAGGTCTAGGTTATATGATAACCCAGTTACTTTTTTACACTGATAAAAGTTTTGATATTTATTTTTTGCCATTTTATGTCTTAATGGTATCCTACTGAGCATTTGCACTCCTGTTCATTTCCCACAGTGAGACGCGGTTTTACCTAGTTTGCACTGTCTGATCAGTGTTACTGCCTATAATCTGATACTACAGCAAACCCTGACGTGACATTCCACACCACCATACATGCTACTTTTTAATTCAGTATAGTGAAGGTCTTCGTTAGGACAGTGACTCTTGATTTTTTTTTTTTTTAATTATTATTATTCTTGCTAAAGCAGCTGCATCCTCCCAGCAGGCAATGCTGTCCTTTTCCTCAGTCCTCTCCTATTTTTTAAGGCACTGCTCAGTACTTCTGTATGCCTTCTGTGTTTTAATGGAGTGGATGAGCAGTTTTCTTTTAAAGAATAGTGGGTGGGGGGAGCTACTCTGAAGGTCTGTCCATGTGCTGGCCTTGAGAGAGTCCCATTTGTGATGTGTGAAGGTGTCCATTAAGAAACAAGAAGGTTTAAGAGTCATCTGATGTGAACATCACTTCCTAGTTTCAAAGTTATATTCCTAGCTTTAAAAAATGCCCAACTGTGTCAAAATAAAGGATATCTCTGTATTACAGTTTTCACAGTAGCTATGTGGATAGTGTGTGTTATTTCCGTTTTGACTCTCTGAAATAGTTACATCCCTGCCCCCCAAATCAGGGCCATCTTTTACAAAAGAGAGATGGCAATATTTTACATAACTCCAGTTATGAAACCCTTTAGTGAGTCTTCATTAATGCCTCATGGTTTATAATTTCATACCTCTTGGCAGGTGGAATAATGCAAATCTTGGCAGGTGTGTAATTTTGAAAGTAGTCCTAGAAAATATTACTATTACTCATATAGCAATCTAATAAAAACTACCTATAGAGTTAACATTCTTACATTCTTTTCTTTCCTTTTTTTTTTGTCAAATATTTCATGATAAAACTCGTTAATTACATGCATTCTTCTACTTAAACTGAAAATATTGTATTAATTAGCAAAAAGTCTTGGGACCATCTAGGTTCCTCCACATGGAGAAATCTGACTTGGAGAGAGACAATTAGAATCTTGAGTGAAAGGTAACAGTGACATTTTCAAAGAGTTCTTAACAGCAGGAGACAGCTTTGTATGCTTTTATGTATTTTAGCCTCAAAAACAGGTTCACTTCAGTAAGAGACTGCTCCTAGGGACACAGAGCCCAAGGAGGTAATTTCCCAGAGCCACATTCACCCTGCCATCCATCGTGGGAAAATCAGGAGCATTCACAAGAAATTTCAGTTCAGCAAGTTAGAAAGATAAGCTACTTACTGAGATCCGTTTCTTCTGGTGCATATTGCTTTTGAGAGGTGACTTCTGTCAGAAGTTAAGCCATCACCAGGACTCAGCCTGTGAAGAGGAAAAGGGTTTTGGTGGTTTTTACTTTTTTATGTCAATAAACATCTACCAACAGGTCACACTGGCTATGACCATGCTGTCTGGCTAGGCATTAAAACATCCGTGATAAGCAGCACTGAGACTCTGTTTATCCTGAGTTGATTTTCCATGAAGTTTGTCAGAGCGTAGCTCAAAGGGCCAAAGCTGCTGAGGCCTCCTGGCCCGGGATTTCTAACACGCGGGCCAGGTCAGCCAAGTTTTCGTAAACAACGTAACTTGCCAGGGTTCATCTCATCTTCTCATCGCGCAGATTCAGCCACACAGGGTAGTCCACTCCTCACGGACTGTGAGGGCTTGCTTGAGAAAATGTGGACAGGAGAGCCCAGCTGTGTGGTGGAGGACACAGGCTCGCTCACCGGCCCTCCGCTCCCATCGGAGGTGACGTGCGGAGCCTCTGCCTGACACCTGAGGGAAAATCCTGACCTCACCAACTCTACCGCCATGGGCTGGCTGAGAGAGACCAGGAAGGGGAAGGTTTCAGCATGGTTTCACCTCCTCGTGGCAAGAGCTAGGTCACTGGAGTCCATTACGGAGCTCACTTCAGCTGCACAGAGTGTTGACATGAGCTGACTCTCCTCAGTAGGTGACACAGTGGACCTGACTTTCAGAAGTAACATTCAGGTTGGGGTTTGCGGTCCCTCTAATTTGTTCAGGACACATGGCAAGTATTCCCTTCTGTGCTATTGTTCACTCAGTCGTGTCCGACTCTTTACAACCCCATAGACTGCAGCCCGCCAGGCTTCCCTGTCCTTCACTATCTGTACTATTACAGAGGGCCCAATTCATGGACATTGATACCCTCCAATTCTGTGACCATCTCTTCCATGGGTTTCAGAATCATGATAGAGAGAGAGGTTGGAGATAAAACAGAAACATCAN EMBV3_08913 CGTGGAAGGCAGCTGCGATCCCTCGGACCAGCTTATCCTGCTCACTGCCCTCCTGCTGCT Variant GeneID:617403|TMEM52:XM_002694183:642_cdna 189^230 3 EMBV3_03786 GeneID:617403 16 GENE TMEM52 NULL transmembrane protein 52 EMBV3_40939 TGGCGTGTTGCAATTGATCATCCCCTGAACGCAGAGAGGAAACGGTGAGCCTGGAAAGAT Gene GeneID:541305|NR5A2:XM_002694274:286_cdna UTR3_Alt 2 NULL GeneID:541305 16 GENE NR5A2 NULL nuclear receptor subfamily 5, group A, member 2 EMBV3_32137 TCACTGACAGACTCAATCGAGAGCTTTCCCAGAAGACTCCACCGAGCATGAGACTGAAGC Gene GeneID:504476|ACTL6B:NM_001083370:77_cdna Constitutive 0 NULL GeneID:504476 25 GENE ACTL6B MGC139460 actin-like 6B EMBV3_18628 TCAGGGAAACCCTCTGCCACCTCAGATATTTCCAAGGAGAGCAACACAGTCTTTTCATTC Variant GeneID:785404|SH3BGRL2:NM_001083791:8_cdna 265^307 1 EMBV3_19915 GeneID:785404 9 GENE SH3BGRL2 MGC139020 SH3 domain binding glutamic acid-rich protein like 2 EMBV3_26575 CAGCTTCCAAGAAGAGTGCAAGTTCAGAGAGACCCTCCTGCCCAACAACTACAATGCCTA Gene GeneID:540317|FGF6:XM_002687890:83_cdna Constitutive 0 NULL GeneID:540317 5 GENE FGF6 NULL fibroblast growth factor 6 EMBV3_07059 GCTTATGGTCTAATGGAGTGTGAAAGGTGTTCTATTTGGTGTCCACCTGCTGTTTACCAG Gene GeneID:616997|FAM136A:NM_001046588:41_cdna Constitutive 1 NULL GeneID:616997 11 GENE FAM136A MGC127625 family with sequence similarity 136, member A EMBV3_05070 GGTCTGGACAAGGCCTGTGATTTGTATCTAAACAATGGCAAAGGTGATGAGGTTTTACTG Gene GeneID:787122|LOC787122:XM_002689424:33_cdna Constitutive 0 NULL GeneID:787122 7 GENE LOC787122 NULL similar to solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 EMBV3_21898 GAGAAAGAAGCCAGGAGGAACTAAGGTCAAAAGACAGAATAGAGAGGGAGAGGCAGTGGG Gene BVT0102_333613 + 0 NULL GK000014.2:72800403-72870630 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04799 GACGCGGCCATATTCAAGAGGTGGCAGAAAGAAACTGAGGTAGGTGACTCATAACCATGC Gene BVT0102_026944 - 1 EMBV3_28671 GK000003.2:77511242-77571198 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170332 TCONS_00170334 TCONS_00170324 TCONS_00170331 1 XLOC_103559 Coding TCONS_00170331 XLOC_103559 Coding Coding WLS 3:77396193-77514577 j TSS127291 5424 1 TCONS_00170331_3 450 0.0435103244837758 11 0.954275529425678 5.85816372325567e-18 0.000289757570529588 6.64662920208906e-10 0.000816092519276492 2.79564773268322e-08 1.6779118221729e-10 7.10938540596861e-10 1.08032432851581e-14 1.30092722690059e-08 1.31902755159698e-08 7.88734982732487e-38 2.34450425966291e-19 5.39000276904442e-15 2.06879865945677e-14 3.82539763689604e-36 0.000944048166826109 6.73958209964999e-28 0.00110956947284612 1.12628495804111e-23 1.03547322520604e-20 1.94904391421531e-07 0.000791745168465479 1.58296036605182e-23 0.000929559385974707 0.00129641870374347 0.00126122474425715 2.39880812844009e-08 1.18522239716243e-06 2.00877911224345e-05 6.60028834283289e-05 XM_005204461.1 WLS PREDICTED: Bos taurus wntless homolog (Drosophila) (WLS), 0.0 4385 100.00 0.448008849557522 NM_001193334.1 WLS Homo sapiens wntless Wnt ligand secretion mediator (WLS), 0.0 3341 90.09 0.453355457227139 TCONS_00170331_3 sp|Q5T9L3|WLS_HUMAN WLS_HUMAN Protein wntless homolog; 0.0 862 96.30 0.955555555555556 1 coding 0 0 0 0 -0.547259863406147 0.0181298637182852 -0.313335115936866 0.000909791358895977 ATCGCTTCCCTGCTCCTTTAAGCGTCCACAGGCGGCGGAGCGGCCACAATCACAGCTCCGGGCATTGGGGGAGCCCGAGCCGGCTGAGCCGGGGGAATCCGTGCGGGCGCCTTTCGTCCCGGTCCCATCCTCGCCGCGCTCCCGTACCCCTGAAGTTTTGCAGCGCCTGGAAAGGAGGCGAGGGAGAAGGGAGCGTGAGAGGGGAGGGAGCAAAAAGCACACCTTAAAACATTTATTTCAAGGAGGAAAGAAAAAGGGGGGCGCAAAAATGGCTGGGGCAATTATAGAAAACATGAGCACCAAGAAGCTGTGCATTGTTGGTGGGATTCTGCTTGTGTTCCAAATCATCGCCTTTCTGGTGGGAGGCTTGATTGGAGAAAATGCAGAAGTTTCCATGGATGTTTCTCTGGCTTACCGTGATGATATGTTTGCTGAGTGGACTGAAATGGCCCATGAGAGAGTGCCCCGGAAACTCAAATGTACCTTCACCTCCCCCAAGACCCTAGAACATGAGGGCCGTTACTATGAATGTGATGTCCTTCCTTTCATGGAAATTGGGTCCGTGGCTCATAAGTATTACCTTCTAAATATCCGGCTGCCTGTGAATGAGAAGAAGAAAATCAACGTTGGGATTGGAGAGATAAAGGATATTCGGCTGGTGGGAATTCACCAGAATGGAGGCTTCACCAAGGTGTGGTTTGCCATGAAGACCTTCCTTACACCCAGCATCTTCATCATTATGGTGTGGTATTGGAGGAGGATCACCATGATGTCTCGACCCCCAGTCCTCCTAGAAAAAGTCATCTTTGCCCTTGGGATTTCCATGACTTTTATCAACATCCCAGTGGAGTGGTTTTCCATTGGGTTTGACTGGACCTGGATGCTCTTGTTTGGTGATATCCGACAGGGCATCTTCTACGCAATGCTTCTCTCCTTCTGGATCATCTTCTGTGGTGAGCACATGATGGACCAGCATGAGCGGAATCATATAGCAGGGTATTGGAAGCAAGTCGGACCAATTGCTGTTGGCTCTTTCTGCCTTTTCATATTTGACATGTGTGAGAGAGGGGTACAACTCACGAATCCCTTCTACAGTATCTGGACTACAGATGTCGGAACAGAACTGGCTATGGCCTTCATCATAGTGGCTGGGATCTGCCTCTGCCTCTACTTCCTGTTTCTGTGCTTCATGGTCTTTCAGGTTTTTCGGAACATCAGCGGGAAGCAATCAAGCCTGCCAGCCATGAGCAAAGTCCGGCGGCTACACTATGAGGGGCTAATTTTCAGGTTCAAGTTCCTCATGCTTATCACCTTGGCCTGTGCTGCCATGACTGTCATCTTCTTCATTGTTAGTCAGGTGACTGAAGGCCATTGGAAGTGGGGTGGTGTCACAGTCCAAGTGAACAGTGCCTTTTTCACTGGCATCTATGGCATGTGGAACCTGTATGTCTTTGCTTTGATGTTCTTGTACGCGCCATCCCATAAGAACTATGGGGAAGACCAATCCAACGGTGATCTGGGTGTACACAGTGGGGAAGAACTCCAGCTCACCACCACTATCACCCACGTGGACGGGCCCACTGAGATCTACAAGTTGACCCGCAAGGAGGCCCAGGAGTAGGAGGATTCAGCACCTGACTGGGACTTCCCGCCACATCCCAGCCATTTTTACTAGAACGGGGAGCGTGCCAGAGAGCTCCACATGCCAACGAACGCTCTGTCTCTTAGCTGTGGTTTCTTGGACCAGTGGTGTGGACATTTGTCAGCTTGCCTTCTGACAAGTAGTTCCCGGAGACAGACTCCTGCAGCCACTAATGTGTTGTGTATGATAACAAAACCTCTGGTATGACACATTTTCTGTGATCATTGTTAATTAGTGACATAGTAACATCTGTAGCAGGTGGTTAGTAAACCTCATGTGTTGGGGGTGCACTCCTTGGGGAATGGTTTGGGCCAGATGGGGTCTATATGGAGTGGAATATTTGACTCCTTTTTTTCTTGTTTTTAGGTTCTAGGGTAGAGTTTAACATTCTTTGCAGTCCAAGATGGGCTGGTGTCATAGTCTTCTCACTCCTAATCCATGACCACTTTTTTCCCTATTTATATCACCAGGTAGCCTATTGAGTTAATATTTAAGTTGTCAATCGATATGTGTCCCTATTTTTTAAGGCATAATATAAAATAACCGAATTTCATGAGAAGATCTATTACACCAGGGGCATTTCAGCTTTGAAACCAAATCTGTGTATCCAATACTAACCAGTCTGTTGGATGTGGGTTTTAAAAAAAATGTTTGCTAAACTATCCAAGTAGGATTTATTGTATTAAATGGCCTTTGGGTCTAAAAAACTTTTTTAACCTCTTGCTTAAAATGTGTTTTCTTTTGATAAGATGCTTCAAACAGCCTCCACAAGTGTAGATCTGATCATTTAAATAAACCTGTATGTATATGCATGTATGTGTATGCACACCTCGTCCTCCTGCTCAGCCGGAACACATGCATGCAGATTCTTTTTTTTGAGTTGTGTCTATGGGGTGGGGGGAAATAGCTTTATGAAAAATTAAAATATTTTGCCATCAAAGTTTTGGGGACAGTATATATTTCTGGAAATAGGGTAACATTTTCCGCACTGCATGGTTAACCTCCACTGGATGGCATGTGTGGCAGAAAGCGTGTGTGTGGGGGGCAAGTTAAATGATTTAGACGTAGACTATGATTCCCCTACTATGCCCAGTTCCCCAAGTAGACTGTGTCATTGTACTTTAACTCTGCCATTGGAAAGGCAACGTAATACAGCAGAGAAAGAATAGTGGGTGGGAGGTTAGAAGGCAGTGTTTCCTAGCAGAGGTCTGACATTTATTACATAGTGTGACCTTGTTGAAGCCACCTGACCTGGCTGTTCCCTCACATATAAACTACCATTCATGAAGTTTTAACTGCTTCACGGGGTGGCAGTGCAAATTAGATCAGTTAATGTGTATAGAAATGCATTTTAAACTCTAAAACTGTGTAAATATGTTCTTTTTGGAGTCTAAAGACAATTTCATGAGTGTCCTGTTTTTCAGACATCGATGCCTGGAGGTTTGGGACACAATCCACTTAATCTGCCTACTCAGCACTCCTTCTCTATCCTTTCTTTTCCCTGATTTTGGCTAAAGCTGTGGTAAATAGTGATGGGAGGAAATATTTTGGTTTTGGCTGTTCTCTCAGGCCTTTTCCTGTCCTGGTAAACATTTGATGGTGTCTGATCCAATGCACTCAGCATCCACTTCTGATTGATCACTGTGGTGCCAGGCTTTAAATGTAGCCCATGTCTCACAGTCTGAAAGGGAAGACGAAGTTAAAATACAACAAGTAATCTCGTGCCCCAGAGGATGGAGGCAGAATTTCTCCAAGGAGATGAGAAAAGGGCCTGAGATAGGTCTTGAAGAAGAAGTAAGATTTTACCAGGGCTGAAGGACAAAGGGAACAGCAGGACGAAAATCATACAGGAAGTGAAGAATGGAGAATGCTTAGATAAAGCTGGTCATCAGGCCTGGCTGGCATATAGAAGGAGTGGAAATAGCAGAAGGTAAGCCCCATGCATCTGTGAGCCAAAATGAGAAGGGTCCTTAATGCTGTGGGAAGAGTTATCAGACTCAGCCTAGGGTTTTATGTGGAGACGTGATATGATCAGAATTACTGCAACAGAGAGGCTGGACAAGCCCAGGAAAAAGATCACAAAGGCTGAAAACAGGGCAATAGTAGAGGACATGGAGAAGATCAGATTAGTTTTGGAGATAGAAGTGGCAAGGTTTGGGCATTCTGAATGTGGACATGAAAAGCAACAGCAGAGTCCAATGTCAAGCCCTTTGAGGAGAGAGAATGGTATGGCCCTTTAAGGATTCCTGGAGGGGCAGCGTCAGAGAGTCTATCACCTAAGGGTATGTATCCATACTAGAAGTTAAGTCTAGCAAGCTTACCTAAACGAGAGACTTTAGCAGAACCTTCCAAGAGCACCAATACCAGTAATTCATGGACCTTTCCACTAGAACAGTTCCATTTACTAGCTGTCTGTCTCTCTAGCTTCCGAAGTAGGGGAGGTACATGAGTGGCTCAGTCTCAGGCAAGCGGCTGCCCCTTGCTGATCAACTGTGATCAGGAAACCAAGTCCAGTGGCCGCTAACAGATTACCCTGTGGATTGGGGTCAGTTTCTGAAGAATGGAGAGTCCATTTTGAGTTGGCACACAGTCAGAAAACATGTACTACAGTGGGCCAGATGAGAAGTTTGGATTTGCTTGGGCTGGGTTTTCAAAGCTGTCTTCTGGAAGAAATGACAAGCTAACAGAAGCAAGAGGAGAAGCAGACCAGTCAGGGAAGGAGGCTTTGCAGCCATCACTGAGAATGACGTTGAGCTTGGCAGAGCATCAAAACATCACGTAACTATGGTGAACCAGACGCGGCCATATTCAAGAGGTGGCAGAAAGAAACTGAGGTAGGTGACTCATAGCCATGCAAAGTATCAAAGAAGCCAAAGAAAGAACCAGATCAAGGGGGGAAAGTTAGATAACCTGAGAAACTCAACAGCATTTAAAGATTGAATAAGGCATGTTGGATTTGGCATTGATATGTGGGACCTCACGGCAAGCGCAGCAATTAGACGTAGAATAAGATCAGTGAGTGCTCGTGATGGGAAGATAAGAGGTAGGATGGTGGCTCCAGGAGAAACCAGAGTCTGGGGAGAAAATGGGACTGGATTTGTAGACATTGAGGGTGAGAGTCAGCCATGAAGTCAAGATGATGATGAAGTAGCTTACGCCCCAAGAAGGTCAGAGACTTGGGATAAAGGACACAAGCTGATGAGTTAGTTTTGACAGAGTGAAAGGTCACTTTTATCCAGAGACAGGAGAGAAGTAACCAGTGGATGCTGAAGGAGAAACTTGAGGTCAAAAGAAGAGAAGTTGGCAACCGGTCCCTCTGTGTGTTCTGTTTTCTCTTTTCCCCTTGAACATGAAATGAGCCTAGAGTTGTCCTGAAGAATTTCTCGGTTTCAACAATGCAGGTAGAATACATTTGTTTTCAATCAGCAGAAAGTTCAAGAAACGCTTCAAGAGGTGAGAAAAAGCCTGTAATAAGGACTGTCAACCCAGAGCAAAAATTAATTGTTGGTCATGTATATGTTTTACTAATTGTCTTAAAATTTTTAAGTAATTTTGAAGAATATGATAATTGTAATAAGTTTAAAATTCCCCAACTGTCTGCTTTTTAAAAATAAGAAAACTTGCCATTTATGCAACAAACAGGTAAAATACAATTGATATTTCCCATAGAAAACAGTCAGTTTTATATTGACTTATTGGGTTCACCAGGTGTTAATCCTACATTTTCCCCTTAGGGGAAGAAAATGTCTATAATAATGAAATAAATAGTTTCTTTCACAACC EMBV3_02089 CTTGACCAAGTATGACAACCTATTTGAAACATCCTTCCCCTACTCCATGGGCTGGCACGG Gene GeneID:506997|GALT:NM_001035041:7_cdna Constitutive 1 NULL GeneID:506997 8 GENE GALT NULL galactose-1-phosphate uridylyltransferase EMBV3_17650 CCTTTGGTCAGTTCCTCCTGGCCATCTTTTTACCCTACTGTGGCCCCAACGAAATAGATC Gene GeneID:521252|LOC521252:XM_002693610:120_cdna Constitutive 0 NULL GeneID:521252 15 GENE LOC521252 NULL similar to olfactory receptor Olfr1178 EMBV3_06098 AGCAGGCCCCAAATCCAAAAAGGCAAAGGATACAGGCAAAGGCCCTTCACTCACAAATCC Gene GeneID:613778|POLR3G:XM_002689385:34_cdna Constitutive 0 NULL GeneID:613778 7 GENE POLR3G NULL polymerase (RNA) III (DNA directed) polypeptide G (32kD) EMBV3_32569 CTTCTTTGTCTTTGGAGCCGCGTTGTGTGCTGAGAGTGTCAACAAGGAGATGGAGCCACT Gene GeneID:767601|BCL2L2:NM_001076533:278_cdna UTR3_Alt 2 NULL GeneID:767601 10 GENE BCL2L2 NULL BCL2-like 2 EMBV3_36538 TCAGACACTATGACAGAGGGCCGTGTAGGAATAAGCTTGGCCACTCAAGAGCCTCAGTGA Gene GeneID:524166|RNF144B:NM_001099028:104_cdna UTR3_Alt 2 NULL GeneID:524166 23 GENE RNF144B MGC157214 ring finger protein 144B EMBV3_08555 AATAGGAAGAACTTGGGGATAGTTATGGTTTCTTGGCAGCAGAAGGGCAGTTATGAAAAG Gene GeneID:514787|STK38L:NM_001101092:11_cdna UTR3_Alt 2 NULL GeneID:514787 5 GENE STK38L NULL serine/threonine kinase 38 like EMBV3_04223 GTGGTGGGGTAGTGGTTATCCTTTTTTGCTCCTTTTCGTTCGACAGGGTCCTGAGATAGT Gene BVT0101_042724 + 0 NULL GK000025.2:2780055-2815161 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144322 TCONS_00144314 TCONS_00144315 TCONS_00144320 TCONS_00144323 TCONS_00144313 TCONS_00144327 TCONS_00144324 TCONS_00144326 TCONS_00144321 1 XLOC_088529 Coding TCONS_00144323 XLOC_088529 Coding Coding LOC100140123 25:2771936-2783998 j TSS108384 5989 1 TCONS_00144323_2 380 0.126398397061279 8 0.504104137302048 0.00111367884692317 0.000100563241932184 0.000685545116157489 0.000747513942483498 0.000442638395509481 0.000348990509866871 0.000711919606441539 0.00150146553677496 0.000623070095166392 0.000171005784248812 7.34821742176355e-05 4.24112599316844e-05 4.33619462352772e-05 0.000549095239266217 4.1884950094996e-05 1.42603895642609e-12 0.0013681346953795 0.00160440558945757 0.00108192812452645 5.4763941640478e-10 0.000131170739963622 9.82893003906711e-53 4.21743655213586e-20 5.22517281281832e-05 0.000467437323651399 0.000986595362901923 0.000226079848974104 4.03743303404743e-05 4.29920705620573e-05 1.24507993999875e-15 NM_001109965.1 ZNF75A Bos taurus zinc finger protein 75a (ZNF75A), mRNA. 0.0 1719 80.64 0.311571213892136 XM_005255551.1 ZNF75A PREDICTED: Homo sapiens zinc finger protein 75a (ZNF75A), 0.0 1332 81.83 0.222407747537151 TCONS_00144323_2 sp|Q96N20|ZN75A_HUMAN ZN75A_HUMAN Zinc finger protein 75A; 3e-158 451 81.34 0.7 5 coding 1 1 1 1 -0.0704871663926318 0.567155689083352 -0.019745516498594 0.753022434803278 CCGGTTGACCGGGTTTTCCGGCCCCGGGGAATCTAAGTGGAACCCGGCGTTCCCCTCTTCCCCCCGCCTCTAGCCTCTGAGTGGCGCGCTAGGCGGCGAGGCGGGGGCAGTCCTCCTTAGAGCCACTGTTAGACTGGAGGCGACTTGCGGTTGAGCCCTGGGAAGAGGGAGCGGCTTCCGTGAAGCCAGGCCGTCTGAGCTCTCCTACAAGTTTTGATACAATGGAAAGGAGCACCTCAAAAGGTCCAGGAAGTGAAGGCTTTCATCTTCCCAGAAGGACAAAGGAAGAAGATTGTTTTATTGATTTTGTTCCAGACCAGACTGGGCCTCAGTTGTCAGATCTGGAGCTGGTGGTGTATCTGGCACAGGAGCAGAATTGTTCCTAGATCAAAATGATGACAGTAGATCTGAAGGTTGCAGTCCAGGAGCTGGGAAAGGAGGCAGTGCTCTTGGGAGAAGCAGCAGAGGCCCCAGGCTTCCAGCTGAAGCCAGCAGAGTCCCAGCCAGTGGGCATGTCCCTGGAGGAAGAAGTTTGGAATATACACCAGGGTCTACAAGAGCCACTGAGCAGGAATACCCACAAAGAACCTGAGCCCGTATGTGAGAGGGTGGTACCTACTTACCAGATCCTAGCCCTTCCTGAGGAAACAAACACCAAAGACTGGACAGTGGCACCTGAGTTCATCTTGCCTGAGTCCCAGGGTTTGTTGACATTTGAGGAAGTGGCCATATACTTTTCCCAGGAAGAATGGGAACTACTGAATCCCACTCAGAAGGCCCTCTACAATGACGTAATGCACGAGAACTATGAGACTGTCATCTCTCTAGCATTATTTGTGCTCCCCAAACCTAAAGTGATCTATTTAGAGCAAGGGGAAGAGCCATATATTCAAGGATCTCCAATGTTCAAAGACAATCCTGGAGAGCTGCTTTCAGAGATAAAACTGAAAAATGACATGGAAAATCATCAACTCATGTGTCTTTCTGACTTAGAAATACAAGCACCAGGAGACATAGTATCAAAAAAAGCCAGTGTGAATGTTCATCAGAAAACAACAGGCAAAGAAAATCATGGTGATGTGCATAGGCTGGGGAAATGGCACCAAGATTTTCCAGTGAAGGAAAGAAATAAACTTTCCAACTGGTGGGAGGAAGAGCTGCTGAAACTTATGGAGCTTCATAAGAAAGAACGTGCAACAGAGAAGCCTTTTAAATGTCAGGAATGTGGGAAAAGCTTCAGAGTTAGTTCTGACCTTATTAAGCACCAAAGAATTCACACTGAGGAGAAACCGTATAAATGTCAGCAGTGTGATAAGAGGTTTAGATGGAGGTCAGATCTTAATAAGCACTTAACCACACACCAAGGAGTAAAACCGTATAAATGCTCCTGGTGTGGGAAAAGCTTCAGTCAAAATTCACATCTCCACACACATCAAAGAATTCACACAGGAGAGAAGCCCTTTACATGTCATGAATGTGGAAAAAAATTCAGTCAAAATTCCCACCTTATTAAACACCGGAGAACCCATCTATAACACATGCAAGCATCAGTGAATGCTCAAGACTTTGACACCAGGATTGACATCAATGAAGAAAAGCTTATCTAGTGTTCTTAGTCTAAGAAATTTACCAACCAGAGTTTAACCCTAAAGTTTATGAAAAATTTCAAAATTAAGAAGCATGAAGAATTTTTTACCAGTGGAAAATTTGGTGATATAAACATCATGTTTCACAGAAAGAAGTTAGGGTTGACTGTGAGAGGAAACAGTAGTAGTTAGTTGTACTACTTACTGTTTTTACTTAGAACTATCACTGAATTCCTTAGGAAAATAGGTGTTCTCTAAGAACCCGAGTAAGGGAAAAAGCTTTTGGGATTGTAGCTGACAGAATAGCAATACCAGCTTCAAATAGCAGATGCAGTCATGATCACCAGTCTTCTGTGGTCACAGAGGTAAATATTGTTTTTCATTGATCTTCCAGCCACTGTTAAGCACATATGATGGAAACATTTGTAGCATAGTTTTCCAAAATAAAAAGCAGTAATATACGTGTTTGATTACATACATTGTCTTTCAGGTAGCCGACTTAGCAGTTTCAATAGTCTTTTGGGACGGAAATGAATTTTAACATGAAGTTTTCCAGAAACCAAGTTGAGTTTTCTTACTCTTGTCATTGGACAGTGTTTGCAAAATTGACATGGTTTTGACTTCCTTTATGAATCTTTATTTCTATACCTCTGGAATCCTTTCAGCACAATTTTTACTGTGATGAAATAATTTACTTTAGTGGTGGAGAATCTGCCAGGTGAACTGATGCACCATCTTACCTCTCATTGGTGATGTTTGAAAAAAGGAGAATATCTCTAATGAGGTCATGTGGACATGAATTGGAATTTTTACCATTCAGTCTATATTAGATGGCAGGCTATAGTGCATGGGGTTGCAGAGTTGGACACGACTTAGCAGCTAAACAACAACAATATAATAGATGTAAAGAATTTTCTGTAATAAACTAGACTCCTTACCTCACAATGCCAATAGGATAAAAGAGCCATGAACATGGGTACTTTTCTGAGGCCTAAATGGATATTAATGGGAATTCAGGAACAATTTCTCAGTTTTTTGTCTGTTCACATTTTAATTTGGCTTTGGTTTGTTATTAAGAACAAGGAGAGGGTTATGCTTGTCTGGGAACTGGCGTGTGTGCAGTAGGGAGGATCCTGTGGGTCACTGGGCATGGTGCTCTGAATCCAGCAGCAGGAGACCAAGCCCAAAGGTTTGGGAGCTGATGCTAAGTGGTAGATGAAGGTGGGTGAACCCGCACCTCCTTGGCTGACAATAAACTGTTAAACACACGAGATCTTCTGTTTCTGTTCAGCACACCATAGACTGCTGAGAATCTCTCTGGATTCTGGGTTTTCTTATAATACCTTTTTATCTACAGCCCTGATTCAGATGTGTTCCTTCTAGAGCTTTCGGGTAGTGTTAGGAAAGGAGTTAAATAATGTCTTTAACATATCTCTTAGAAACAAGGAAGTTAAGGCTCAGAGAGATTTAGGGACTTGTTAAGACCCCATAACTAGTGGATCTGTTGGCTGTCACTTAGCTGTAACTAGTCAGGCCTGAAGACAGGATCAGTTGGACTGATCTGTATGTTGTCCCTGCCCAGTCAGCCTGGATGACATTGGATCTGTTTCAAGTTTGTAAAACTAATTTCTTGGTTACTGAAACACGCATAAGTCTTCATTTTCTCTATGAAATAGAGATAAAGCTCAACTCAGGGTTTTCTGAGGATTAGAGGGATTGATGAAGGAAAAGTATCTAATGGCCATGCTGGTAGTGGAGTCTCAGACAGTGTCCATGTCCTTTTCCTTTTCTCTGATCCGCAGTGGTGTGTTGGGTGGACTGACCACACTGAAGGAGCTAGTGCATCTGTGGCTGTTGGAGCTCCTTCCAGGAGCTGAGCGCTCGTTGTGGTGGTTTGCTCAGTTGATTTGTCCTTTGGCTTCAGTGCTTTATGGTGTAAGTCACTTGATCTGTTGGTGTGTCGCTGTCAGCAAGATTTCATTTCCTTCCCCAAGATGAACTCTGTCAAGAATTATTTGCTAAGCACAGCCAGCTCTGCATAGATCTTACCCAACACCCTCAATCTTAACACCCCTGGAACTCTTGTCTCTTCTCCCAGGATACACCTATGGATTAGTTGCTGGCACTGCATTCATGCATTTGTTTTAATGAGGTCCTATTTTGTGTCCAGGTACTTGTTTTTTTGAAGAGCAGACTTTCAACAAGCCTTTTTGTTTTCTTTCCCCGCAGTGGGTCTTTGTTGCAGTGTGCAGGCTTCTCTTGTGGTGAGTGGGCTTAGTTGCCCCAAAGCATGTGGGATCTTGGTTCCCCAACCAGGGATTGAACCCATGTCCCTTGCATTTGAAGGCAGATTCTTAATCACTGGACCACCAGGGAAGTTCCCACGTACTCTTCTAAGCTAAGGACATGATAATGGACAAGGAGACGAAATGCTTATTGCTGTGGAGCTTGTATCCCAGTGAACAGTAAGAATGGGGTGGTTGGGACTTCCTGGCGGTCCAGTAGGACTCCTCACTTTCACTGCTGAGGGTCTGGGTCCAGTCCTTGGTTGGGGAACTGGTATCCTGTAAGCTAATGTGGGACAGCCAAAAAAAAAAAAAAAAAAAGTGGTGGGGTAGTGGTTATCCTTTTTTGCTCCTTTTCGTTCGACAGGGTCCTGAGATAGTTTTGAGCAGTGGGTTGTATAGAAGTCTCACTTCTGGACTGAAGCACTTATTTGTTGGTACAGGACTCTTGTGCTGTCTTCTGCCTCAGTCATGTAAGCATATAGGAGCCACGAGATCAGAACAGTCTGGAATGCTGACCTTCCACACTGGGGAGAGGTATCTGTTCTAGATGGTCTGCCAGACCTGTAATGCACTTTGTAGGAACAATAAATAAACTTTTGTTGTGTTAAATTACTGGGATGTTGGTGCTGTGTGTTTCTACAGCATAACCTGACCTGTCTTAATTGGGCTGGCTGTTCTGGTAGAGCTCAGAAACCTTTGTCATTCTGCCTGGTCTTTGGTCCTCAGAAGAGATCTAGTTTCCTCTTGATGCTCCACTGAGATGATGTAACTGTAACACCGGTGGAAACACATAGGAGCTTACAAGATTGTAGGTGATGGGAAAGAAAGACTGGATTGCTTACCCAAAACAAATAAGAGGTCAGTTGTTGAAGTGGATGAGGCAACCATCTCTCCCTCCCTCTGACCTTATTCCACTTTGTCTTTGTCCTCCACTGCACCACTGCTCCATTAACCCCTCATGCACTGGAAGGGTTTCTGTCCATCAGTGGGCTTGAGAGTGAGTAGGGATTTCCTTCCATTCCTCATATGAATGTAGTAGACTTCAAGTAATTGTTTGTTAAATACCTCTTGTGCCTTCTGTGAGTTGTGCCTCAGAGAACACAGGACACAAGTCACCAAAATTTCCCACAGTATAAAGAGGAATGTGGCTTCTCTCCCTGGACTGAAAGGTGACAGTTGGAAAGAAACTTGGACAGGAACACAGGAGCAGTACAATCCAGCTGGGGAATGAGAAACCTCCAGTGGGAAAGTCTTAGCCACTAGTTAGCAGCATGGTGTCTTATTCCTTATCTTTGGAATTTGGGTTGGATGTGTGCAAGTTAGAAGAAGGCATTTCTATACCTCATCACAGGAATGAGAGCTGATTACTAAAACAACAATATAAAACTAAAACTATTGAACCTTGGTTCAAAAATGAATTCAGACTTGACCCTGGGTTCAGTCTCGCTAATGTGACCTTTGTAACCAGATGATTTCTAGGACAAACCAGAAGGTGCTTTATTTTTTGTGTGTTCAGTTAACAGCCTTACAAGTGGCTCCAGGGTTGCTTCTGAGAAGCAGATCTCTGATCTAGTCTAGCCCCTAGATCTTTGACACCTTCTCTGCATTGGTCCATCCCAGTGGTCACAGTCTTGGGACCATTGCATACCCAGAGTTCTGGCCATTAAGCTGACTGTAACCTCAAGCTGATCTTGAGAACTTCCACTCTCTTGACTGGAGGGGAAGTACAGGAGGAGAGCTTGGAAACTAAAACTCTGGTGTTTCGATCAGCTTTTGAAACTATGAGAACAGTGGTTAATTCTGCTGGAGAACTTGAGACAAAGAATCCTAAGTAGCCTTTTCGATTCTTCAGGACAAGGTAAGGACGCGTGGAGCTCTAGTTCTTTGTTTTCCTAGTGAACATGTTTTCTGCTGTCCTTTACTTAACTCTACAGTGTGCTTATGTGAATGAATGCCACACCCTGCACAAAGCAAGTGAGGAGCCCTGCTCTTTGGTTCCGCAGTGACCTCTTATGACTTATGGCAGAAACCCTGTCAGGGGTTTATACCGACCTGCCAATGGACTTCCCTGGTGGCTTAGACAATAAAGTGTTGCCTACCAGGAGACCTGGGTTC EMBV3_39152 TGCTGATTCTGCCCGCTACCTGCGCTACCTGGGGCTCCTGGAAATTCTGAGCCGCGATCT Gene GeneID:617865|SLC12A9:XM_002698203:758_cdna Constitutive 1 NULL GeneID:617865 25 GENE SLC12A9 NULL solute carrier family 12 (potassium/chloride transporters), member 9 EMBV3_08683 GATTTTGAAATGGGAAGCCCTTCACGCTGCGTACGAGCTGCCTTTCGACAGGCACGACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25798 TTCTCTTTGCGGTGGCTTCTCTTGTTGTGCAGCATGGGCTCCAGGGCACTCCAGTTTCAG Gene BVT0102_319304 - 1 EMBV3_04582 GK000003.2:59809112-59843561 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177949 1 XLOC_107722 NonCoding TCONS_00177949 XLOC_107722 NonCoding NonCoding - 3:59821652-59821976 - TSS132708 324 0.996913580246914 1 0 0 0 0 0 0 0 0 0 7.30568389402503e-05 0 7.06540575419035e-06 0.000143468673374161 0.00203683704716529 5.80740148812868e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 2.96456457461973e-05 8.98999929759449e-05 0 NM_001001159.1 TLR6 Bos taurus toll-like receptor 6 (TLR6), mRNA. 5e-37 158 71.11 0.929012345679012 0 noncoding 0 0 0 0 -0.652994987266011 0.0917255187875424 -0.0294842399836854 0.553627471115494 CAGTGGTAAAGAATCTGCCTGCCAGTGAAGGAGACACAGGTTCGATTTCTGGTCTGGGAAGATCCCACATGGCAGTAAAGCAACTAAGAAGCCCATGCACCACAGCTATGGAAGCCGGGAGCCACGACGACTGAGTTAATGTGCGGCACCTGCTGAAACTGGAGTGCCCTGGAGCCCATGCTGCACAACAAGAGAAGCCACCGCAAAGAGAAGCCCGTGGAGCACCACAACTAGACAGGAGCTCCCACACTTCGCAACTAGAAGAAAGTCCGTGCAGCACCGAAGACCCAGCGTAGCCAAAAATAAATAAATAAAATTATTTTT TCONS_00173558 . 5' 12353 TCONS_00173558 . 5' 12353 EMBV3_08737 ACAAGTAAAAACAAGGAGCAGCAGTGACGAGAGGCTGTGTTGCAGATGTGGCCTCCCTTC Gene BVT0102_121229 - 1 EMBV3_24800 GK000010.2:25861851-25862555 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013199 TCONS_00016488 TCONS_00016477 TCONS_00016481 TCONS_00016484 TCONS_00016493 TCONS_00016478 TCONS_00016486 TCONS_00016475 TCONS_00016487 TCONS_00016485 TCONS_00013200 TCONS_00016489 TCONS_00016480 TCONS_00016483 TCONS_00016474 TCONS_00016491 TCONS_00016494 TCONS_00016476 TCONS_00016482 TCONS_00016479 TCONS_00016490 TCONS_00016492 2 XLOC_008026 XLOC_008809 Coding TCONS_00013199 XLOC_008026 Coding Coding SUPT16H 10:25826893-25862703 = TSS9833 4923 1 TCONS_00013199_6 1047 26 0.863246669831607 0.000139266551263717 4.26984719261627e-05 4.71484111053987e-05 0.00015288669794951 7.04320312115351e-05 8.28429271293725e-05 0.000262466833825087 0.000285711426653768 0.000313614294784943 7.6195406670354e-06 0.000390454926117728 0.000199025891904124 6.45777395856278e-61 1.02101015818527e-16 2.32836128489535e-05 0.0137398746475046 0.000193281816462909 0.00953500783643747 5.78211207889159e-05 7.7098318284155e-15 1.68336412483653e-05 0.0053136365705753 0.00552135052302397 0.00548273312076285 0.000663800044898314 3.52261859188258e-05 0.000114561149720175 0.00136999914943894 0.00106013485891043 0.00252185333595256 NM_001192392.1 SUPT16H Bos taurus suppressor of Ty 16 homolog (S. cerevisiae) (SUPT16H), 0.0 6872 100.00 0.773715214300223 NM_007192.3 SUPT16H Homo sapiens suppressor of Ty 16 homolog (S. cerevisiae) (SUPT16H), 0.0 6426 91.69 0.91549867966687 TCONS_00013199_6 sp|Q9Y5B9|SP16H_HUMAN SP16H_HUMAN FACT complex subunit SPT16; 0.0 2161 99.71 0.999044890162369 4 coding 1 0 1 1 -0.312178965848355 0.203312762418628 -0.0373689643082869 0.533350820309786 CGAAACTCTGGACTCTTTTTGCGTTGCACGTTTTGTTGCTTTCCCCCCTCTTCCTTCCTCTCCTCCCCGTAACCTCCGGAGGAAGGATTTTTTTAAAAAAGAATTCCGATCGCTGCCGGGACCCGGAAGCGGAAAGGGCATCTTTGAGGTCGATACTTCCGGGTCACTGGGAGAGTGCGGGATTCCGGGGCCGAGAGAGGGTGGCGGAGCCGGGACCTCGCGTGATTCTCGGAACCCGAGGAGAAGCGGCGTCTGTGGCTATGGCTGTAACTCTCGACAAAGACGCTTATTATCGACGAGTGAAGAGACTGTACAGCAATTGGAGGAAAGGAGAAGATGAGTATGCCAACGTTGATGCCATTGTTGTATCAGTGGGTGTTGATGAAGAAATTGTTTATGCCAAATCAACTGCCTTACAGACGTGGCTCTTTGGTTATGAACTAACTGATACTATCATGGTATTCTGTGATGACAAAATCATCTTTATGGCCAGCAAGAAAAAAGTGGAGTTCCTGAAACAGATTGCCAACACGAAGGGCAACGAGAACGCTAACGGGGCGCCTGCCATCACACTGCTTGTACGAGAAAAGAATGAAAGTAACAAGAGCAGCTTTGACAAAATGATTGAAGCCATTAAAGAAAGCAAGAATGGCAAGAAGATTGGAGTGTTCAGCAAAGACAAATTTCCAGGAGAGTTCATGAAGAGCTGGAATGACTGCCTCAACAAAGAGGGCTTTGACAAAATAGACATCAGTGCAGTTGTGGCCTATACCATTGCTGTAAAGGAGGATGGAGAGCTCAATCTAATGAAGAAAGCAGCTAGCATCACCTCTGAGGTCTTCAACAAATTCTTCAAGGAAAGAGTCATGGAAATAGTAGATGCAGATGAGAAAGTTCGACACAGCAAACTGGCTGAGTCTGTGGAAAAGGCCATAGAAGAGAAAAAATACCTAGCTGGGGCAGACCCTTCTACTGTGGAAATGTGTTACCCTCCTATCATTCAGAGTGGTGGCAACTATAATCTCAAGTTCAGTGTGGTGAGTGACAAGAATCATATGCATTTTGGGGCCATTACCTGTGCCATGGGTATTCGCTTCAAATCTTACTGCTCCAACCTTGTTCGCACTTTGATGGTTGATCCTTCTCAGGAGGTTCAAGAAAATTACAACTTTTTGCTTCAGCTGCAAGAGGAGCTGCTAAAGGAACTAAGACATGGCGTGAAGATATGTGATGTATATAATGCTGTCATGGATGTGGTTAAAAAGCAGAAGCCAGAGCTGCTGAACAAAATTACCAAAAACCTAGGGTTTGGAATGGGCATTGAATTCCGTGAAGGTTCTTTAGTAATTAATAGTAAAAATCAGTACAAACTAAAGAAAGGGATGGTTTTCAGCATCAATTTGGGATTCTCAGATTTGACTAACAAGGAAGGGAAGAAACCAGAAGAGAAAACCTATGCCCTGTTCATTGGAGACACAGTGCTTGTGGATGAGGATGGCCCAGCTACCGTTCTCACTTCTGTGAAGAAGAAAGTGAAGAACGTAGGGATTTTTCTAAAGAATGAGGATGAGGAAGAAGAGGAAGAGGAGAAAGATGAAGCTGAGGACCTGTTGGGAAGAGGTTCCAGAGCAGCTTTACTTACAGAAAGAACACGAAATGAGATGACTGCAGAAGAGAAGCGAAGAGCCCATCAAAAAGAACTGGCAGCTCAACTCAACGAGGAAGCAAAGAGGCGATTAACTGAACAGAAAGGGGAACAGCAGATTCAGAAAGCTCGTAAATCTAATGTGTCCTATAAAAACCCATCTTTGATGCCTAAGGAACCACACATACGGGAAATGAAGATCTATATTGATAAAAAATACGAGACTGTAATAATGCCTGTGTTTGGCATTGCAACACCTTTTCACATTGCCACAATCAAGAATATAAGTATGTCTGTGGAAGGAGATTATACTTACTTGCGAATCAACTTCTATTGCCCAGGCAGTGCTCTGGGCAGAAATGAGGGCAACATCTTTCCCAACCCAGAAGCTACTTTTGTCAAGGAAATTACATACCGAGCTTCAAATATGAAGGCACCTGGAGAACAGACAGTTCCAGCCTTGAACCTTCAGAACGCTTTCCGAATTATAAAAGAAGTGCAGAAGCGTTACAAGACTCGGGAAGCGGAAGAGAAAGAGAAGGAGGGCATTGTGAAACAAGATTCACTGGTGATCAATCTAAACCGGAGTAATCCCAAACTGAAAGATCTGTACATTCGCCCAAACATTGCCCAAAAGAGGATGCAAGGCTCACTGGAGGCCCATGTCAATGGTTTTCGCTTCACGTCTGTCCGAGGAGACAAAGTGGATATTTTGTACAATAACATCAAGCATGCTTTATTCCAGCCATGTGATGGGGAAATGATTATTGTCTTGCACTTTCACCTCAAGAATGCCATCATGTTTGGGAAGAAGCGGCATACAGATGTGCAGTTCTACACAGAAGTCGGGGAGATCACCACAGACTTGGGGAAACATCAGCATATGCATGACCGAGATGACCTCTATGCTGAGCAGATGGAAAGAGAAATGAGGCACAAACTGAAAACAGCCTTTAAAAATTTCATTGAAAAAGTAGAGGCTCTAACCAAGGAGGAACTGGAATTTGAAGTGCCTTTTAGGGACTTGGGGTTTAATGGTGCTCCCTATAGGAGCACCTGCCTCCTTCAGCCTACTAGCAGTGCGCTGGTAAACGCTACAGAATGGCCACCTTTTGTGGTAACGTTGGATGAAGTGGAGCTGATTCACTTTGAGCGAGTCCAGTTTCACCTGAAGAACTTTGACATGGTGATCGTCTACAAGGACTACAGCAAGAAAGTGACAATGATCAATGCGATTCCTGTTGCCTCTCTTGACCCCATCAAGGAATGGTTAAATTCCTGTGACCTAAAATACACAGAAGGAGTACAGTCCCTCAACTGGACTAAAATTATGAAGACCATTGTTGATGACCCTGAGGGCTTCTTTGAACAAGGTGGCTGGTCTTTCCTGGAACCTGAGGGTGAGGGGAGTGATGCTGAGGAAGGGGATTCCGAGTCTGAAATCGAAGATGAGACTTTTAATCCTTCAGAGGAAGACTATGAAGAGGAGGAGGAGGACAGTGATGAAGATTATTCATCAGAAGCTGAAGAATCAGATTATTCCAAGGAATCATTGGGCAGTGAAGAAGAGAGTGGAAAGGATTGGGACGAACTGGAGGAAGAAGCCCGAAAAGCCGACCGTGAAAGCCGCTATGAGGAAGAAGAAGAACAGAGTCGAAGTATGAGCCGAAAGAGGAAGGCATCTGTGCACAGTTCAGGCCGAGGCTCTAACCGAGGTTCCAGACACAGCTCTGCGCCTCCCAAGAAAAAGAGGAAGTAACTTCAGAACTTTGGCCCTCAGCTCCATTCTTCCTACAGCCAATCCCTGAAAATTTTACATGACATAGAAACTGTATTTTTTCCTTTTTTTTTTTTCTTTTGAAGTTTTGCCATTTGTGTATGGGTTTAGGGGGCCATTTGTGTGGACCAAGCTACTCGGGGAATTCCAGGCCCACCAGGACACGTGCCAATGGCCCCATCCAGATGGCAAGGGAGGAGGTGTTCTTGAAGAAGGGCAGAGGCTTCCGCTGTTAATAAATACCGTTTCATTCCTCTCTCTTCCTGTCACCTTCTGCCAGGACATTGTTGGCTTCTGACATCTTATTCTTCGATGTCTTAAAGCTATATTTCCAAGACATTGGTACAAGGTGACCTTTGCTGCCTGTACCATGGCTCTTGACCAGCAGATGCGATCCTCCCATCTTACCCGCCTGCCATGACCTTCCTCACGTCTCTTTAAGACACATCTTTGCAGAACTCAAGAAAAGGTTCTTGGAATTTGCTAATGGTGTAAGCAATACAACTTGAGATAGGCTGATCAGGCTGGTATCTCCGTCTAAGTTTTCCTGCTTTCTTGCCTCAGGCAGATTCTGAGGTATTTTTACTGCCTTGGAAGACGTAAGAAGCAGTGATACTCCCTGGCTCAGTTTCATCTTCCTTACAAATTCACACATGGTACAATGGTGGAAGCAAAATTACCATTGTTTCTTTTGTGATGTATGAGGAAAGAATGGCTGTGCCTCATGTACTGCTTCTAGTGAAATCTAGAAGGAGGTCAAAGGAGTCAACATTTAGATCTGGAAGGGGCAAGTCATGCCTTGGGCCTAGAATACCCTGATGAGAAAAGAGAAGAGGAAGGGAGGCCACATCTGCAACACAGCCTCTCGTCACTGCTGCTCCTTGTTTTTACTTGTCTTGCATTGTCCTGTATTTATCACAGTTTCTGTTGAACAGCTTTTTAAGTATTTGGGGAGTTTATCTTGCCATCCTCCCTCCTGGTTCTCTGCACCCACCTGTCCCACTGCAGTTCCTTCTGTGTTCTGTGACTTTAAGAGAAGAGGGGGGAGGGGTCTCGGATTTTTGTTCATTTGTTTGTTTATTTTCTCCTTAGCAGTAGGACTTGATATTTTCAATTTTGGAAAAACTAAAAGATAAATAAACTGTGGTTTTTTTTTTGTTGTTGTTTTGTTTTTATAAATTTACTTTCTGTGACAATTCTTTTGCAGTTCAGTTCCTAAAAACAAGCCTGCTTCTCTCCTAAAAAAGTGCTAAGGCATAGAGAATAATTCTCTTTACCCAGCTAGTATCACAAAAAGGAACTTTTATCACTCTAAACTTTCATGATTAGGTTGAGATATCACAGTAAACCAAATTCATAGTAGAGCAAGTTACTTTATAAGAGACTTTTGACTATGGTTCCCTCAGGGTTTAGAATGGACTAGCACTTGTTCCATCAGGAACACAAATCTTCAGTCATCTCCTTGTAAATAGCTTGGAGGGCAGCAGCAGCTTGAAGAGAC EMBV3_34365 GCAGCATTCCCAGAGGATTCAGTACTCAAGTGAAAAATTAGATAATTTTCAAAGCTGGAG Variant GeneID:510950|KIAA1712:NM_001076833:26_cdna 213^270 3 EMBV3_28611 GeneID:510950 8 GENE KIAA1712 MGC143238 KIAA1712 EMBV3_41403 TGTACGCCTTGCGGGCGTGACACTTCGATTCGCGCATTCCTTCAGGGAACACTTGCAGAG Gene BVV0102_289754 + 0 NULL GK000018.2:54949834-55040036 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084120 TCONS_00084118 TCONS_00084117 TCONS_00084121 TCONS_00084119 1 XLOC_051467 Coding TCONS_00084119 XLOC_051467 Coding Coding GLTSCR1 18:54988677-55064373 j TSS63084 5563 1 TCONS_00084119_8 1334 0.032895919467913 15 0.926705859039567 0.000469312048150364 1.51407590030048e-31 6.53392973223727e-15 1.89085725940594e-10 8.16299169975099e-05 4.4518830121481e-06 5.63514705070905e-09 0.000117751915847901 6.98633996391517e-05 4.98035500719774e-05 2.14663560358759e-70 2.50438562581805e-14 1.27637141592007e-57 3.25312190896843e-05 0.000196730593401144 3.2230075339191e-05 0 4.91668371620609e-06 1.37799473097882e-05 0.000153733117383173 3.8659098348487e-07 6.07877259086991e-05 8.12134903841855e-05 0.000183574109982393 0.0001103613037973 0.000407885373603691 0.000183430803414248 4.7570864190338e-14 4.02241526234061e-05 5.94271660209902e-05 XM_003583450.2 GLTSCR1 PREDICTED: Bos taurus glioma tumor suppressor candidate region gene 1 (GLTSCR1), mRNA. 0.0 5050 100.00 0.503145784648571 NM_015711.3 GLTSCR1 Homo sapiens glioma tumor suppressor candidate region gene 1 (GLTSCR1), mRNA. 0.0 2946 89.38 0.400323566420996 TCONS_00084119_8 sp|Q9NZM4|GSCR1_HUMAN GSCR1_HUMAN Glioma tumor suppressor candidate region gene 1 protein; 0.0 1107 92.80 0.529235382308846 1 coding 0 0 0 0 -0.112815357780819 0.536025065281018 -0.0385601443944872 0.412080134182741 GCTTAAAACAATCACTCGTTTATTCAACACACATTATTGAGTCGCTTCAGTATGCACGTGGCTTTTCCAGGGCACCGGGGAAGCGGAAGGTAACAGACCAGAGTGTAGGTGCCGTTGGCCTGTGCGCCCCGGGAGGGTAGCTCCGAGCTGTCTCGGTGCTCAATGGGTCCCGAGCACGGCGCAGGGCACACTGCAGGCGCTCTGCAAGTGTTCCCTGAAGGAATGCGCGAATCGAAGTGTCACGCCCGCAAGGCGTACACGGCCCGGCAAGGCGGAAACAGACCCAACACCACCGAGGCGTCCCGGGGCTTCTGGGAATCCCATCTGCGCGGCCCGCGAGGCCTCGAGGAGGCGGTAAGACAGGTCGGACCCGCGTCCCCGGTGCCGTCCCCGGTGCCCTCCCCGGGGCCGTAGCAGGTCAAAAGGCCGACTGAGACACGTGCAGAGCAGATGAGAGTCTTGAGTTGTCCCCGTGTGCCTGTTCCCAGCTGAGATAGACCGTGGCGACTCCGTCTTCTTGTTTCAGCTCTTCCGTCTCAGCTGGCCCCCGAAAGGACACTCCCCAAGTCCCCAGCTGGGGGCCCCGCGTAGACCTGGAGTGGACACCCCCTCCTTCCCTTCATGATTCGTTTGTAGCGCAGTGGCGATGGATGATGAGGATGGGAGATGCTTACTAGACGTGATTTGTGACCCTCAGGCCCTCAACGACTTCTTACATGGATCCGAGAAGCTCGACAGTGATGACCTCCTGGATAATCCCGGGGAGGCCCAAAATGCCTTCTATGAAGGTCCCGGGCTCCACGTGCAAGAAGCCTCTGGCAACCACTTGAACCCAGAGCCCAGCCAGCCGGCCCCCAGCGTGGACCTCGACTTCCTGGAAGATGACATCCTGGACTCGCCCGCGGCCGGGGGCGGCGGCGGGGGCGCGGGGGGCGCCGACCAGCCCTGCGACATTCTCCAGCAGAGCCTCCAGGAGGCCAACATCACCGAGCAGACACTCGAGGCTGAGGCTGAGCTGGACCTGGGCCCCTTCCAGCTGCCCACCCTGCAGCCCGCGGACGGCGGGGCTGGCCCGGCGGGGGCCGGAGGGGCTGCTGCCGTGGCCACGGGACCCCAGGCGCTCTTCTCGGGGGGCGCTGACCTGCTGGGGCTCCAGGCCCCACCCACCGTGCTGACCCACCAGGCCCTGGTGCCGCCCCAGGACGTGGTCAGCAAAGCCTTGAGCGTCCAGCCCTTCCTGCAGCCTGTGGGCCTGGGCAACGTGACTCTGCAGCCCATCCCGGGCCTCCAGGGCCTGCCAAATGGCAGCCCCGGGGGTGCCGCAGCAGCCACGCTCGGCCTGGCCCCCATCCAGGTGGTGGGCCAGCCTGTCATGGCACTCAACCCACCCACCTCCCAGCTCCTGGCCAAGCAGGTGCCTGTCAGCGGCTACCTGGCCTCAGCGGCCGGCCCTTCGGAGCCAGTGACCCTGGCATCTGCTGGCGTCTCACCCCAGGGGGCCGGCCTGGTCCTCCAGAAGAACCTCCCCGCCGCCGTGGCCACCACACTCAATGGGAACTCAGTGTTCGGAGGGGCGGGAGCCGCCCCGGCGGCGGCCAGTGGGGCGCCCTCAGGACAGCCGCTGGCGGTGGCCCCCGGCCTGGGCACGTCGCCGCTGGTTCAAGCGCCCAACGTCATTCTGCACCGCACGCCCACACCCATCCAGCCCAAGCCTGCCGGCGTGCTGCCCCCCAAGCTCTACCAGCTGACTCCCAAGCCGTTCGCCCCCGCGGGCGCCACGCTCACCATCCAGGGCGAGGCTGGGGGCCTCCCGCAGCCACCCAAGGCTCCCCAGAACCTGACTTTCATGGCGGCGGGCAAGGCCGGCCAGAACGTGGTGCTGTCGGGCTTCCCGGCGCCCGCCCTGCAGGCCAACGTCTTCAAGCCGCCTCCGGCCACCACCACGGGGGCGGCCCCCCCACAGCCCCCCGGGACCCTGAGCAAGCCCATGAGCGTGCACCTCCTGAACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCTTCCGGGCCAGAACCAGTTCCTGCTGCCTGGCACGTCGGCGGTCCAGCTCCCTCAGCCACTCTCAGCCCTGCCAGCCAACGTGGGCGGGCAGATCCTGGCAGCCGCGGCCCCCCACGCTGGCGGACAGCTCATCGCCAACCCCATCCTCACCAACCAGAACCTGGCGGGCCCGCTGAGCCTGGGCCCCGTGCTGGCCCCCCACTCAGGGGCCCACAGCGCTGCCCACATTCTCTCGGCCGCCCCCATCCAGGTGGGCCAGCCGGCACTCTTCCAGATGCCCGTGTCGCTGGCCGCCGGCAGCCTGCCCACGCAGAGCCAGCCGGCCGCCGCCGGGCCAGCCGCCACCACTGTCCTCCAGGGGGTCACCCTGCCCCCCAGCGCCGTGGCCATGCTCAACACCCCCGACGGTCTGGTGCAGCCCGGCACCCCCGCCACTGGTGGGGAGGCTACGCCTGTCCTCACAGTGCAGACAGCGCCCCAGGCGCCCCCCACGGTCAGCACCCCACTGCCTCTGGGCCTCCAGCAGCCGCAGCAGCAACAGCAGCCGCCGCCGCCACCACAGGCCCCTGCCCCACAGGCTGCCGCCCCGGCTCAGGCCACTACCCCACAGCCCAGCCCTGGCCTGGCGTCCAGCCCGGAGAAGATTGTCCTGGGGCAGCCACCCTCTGCTGCCCCCACGGCCGTCCTCACTCAGGACTCCCTGCAGATGTTTCTGCCCCAGATGGTGACCACCCCCTTCCCGGCGCTGCCCCAGCCGAAGGCTCTTCTCGAGAGATTTCACCAGGTGCCGTCTGGGATCATTCTCCAGAGCAAGGCCGTGGGGGCCCCCACCGCCCCACAGTCCTCCGCCAGCCTGGGACCCCTTGCCAGCCCCACTGCCTCCGTGCTGGTCAGTGGGCAGGCTCCATCCGGGACCCCCACCACCCCCAGCCATCCCCCTGCCCCAGCGCCCATGGCCACCACAGGCCTGCCTCCTCTGCTTCCTGCCGAGAGCAAAGCCTTTGCCAGCAACCTCCCAACCCTGACCGTGGCCAAGGCCGCCCCTTCTGGGCCAGGGAAGTCCTCCGGGCTGCAGTATGAGAGCAAGTTGGGCAGCCTGAAGAAACCCCCCACGCTTCAGCCCAGCAAAGAAGCCTGCTTCCTGGAGCATTTGCACAAACATCAGGGCTCCGTCCTGCACCCTGACTGCAAGACGGCCTTCCCCTCCTTCGAGGATGCCCTGCACCGCCTCCTGCCCTATCATGTCTACCAGGGTGCCCTCCCCTCCCCCAACGACTACCACAAAGTGGACGAGGAGTTCGAGACGGTCTCCACGCAGCTGCTGAAACGCACCCAGGCCATGCTCAATAAATACCGCCTCCTGCTGCTGGAGGAGTCCCGGAGGGTGAGCCCCTCCGCGGAGATGGTAATGATCGACCGAATGTTCATTCAAGAGGAAAAGACCACGCTGGCCTTAGACAAGCAGCTGGCCAAGGAGAAGCCAGATGAGTACGTGTCTTCCTCCCGCACTCTCGGCCTCCCCGTCGCCGCTTCTTCCGAGGGACACCGGCTGCCCGGCCACGGCCCGTCTCCGTCCTCGGCGTCCGGGGCCCCAGCCCAGCCCCCTCTGCACCTGCCCACCAAGCTGGTGATCCGGCACGGCGGCGTGGGCGGCTCCCCCTCCGTGACCTGGGCGCGGGCCTCCTCGTCCTCCCTGTCTTCGTCCTCCTCGTCCTCCGCCGCCTCCTCCCTGGACGCCGACGAGGACGGCCCCATGCCCTCCCGCAACCGGCCGCCCATTAAGACCTACGAGGCCCGGAGCCGCATCGGGCTCAAACTCAAGATCAAACAGGAAGCTGGGCTCAGCAAGGTCGTCCACAACACGGCTTTGGACCCGGTGCACCAAACGCCGCCGCCGCCCCCCACCTCCCTCAAGGCGGCCGAGCCCCCGCCCCGGCCCCCGCCGCCGCCCCCCGCCCCGGGCCAGATGAACGGTACGGTGGACCACCCGCCACCGCCGGCGGCGGCCGCTGACCGCAAGCCCCCGCAGCCGGCCCCGCACTGCCCCCGTCTACCCCTCCGCAAGACCTACCGTGAGAACGTGGAGGCCCCAGGTGTCGGGGTGACCGAGGGGGCAGCGGCGGCGGCCGTGGGCAGAGCCCGGGGCGGCAGCCCGGCCCCGCTGCCCACCAAAGTGGACGAGGCCACCAGCGGGCTCATCCGCGAGCTGGCGGCGGTGGAGGACGAGCTGTACCAGCGGATGCTGAAGGCCGGCCCGGCTGACCCTGCGGCGGGCACCGGGCAGGGCAGCGGCAGCCGGGAGCCCGGCTGGGAGGCACCCCCGCTGCCCCCCGCCAAGCGGCGCAAGTCCGAGTCGCCCGACGTGGACCAGGCCAGCTTCTCCAGCGACAGCCCACAGGACGACACGCTCACAGAACACCTGCAGAGCGCCATCGACAGCATCTTGAACCTCCAACAGGCCCCCGGCCGGACGCCCGCACCCCCGTACTCCCACGCCACCCCGGCGGCCGTCACGCCCACCTCCCCGACACCCCTGCACAGGCCGGAGGCCTACCCGCCCTCCAGTCACAACGGTGGCCTCGGCACCAGGACGTTGAACAGATAACACTGGGCTGGACTTCCCTTCCCTGTCCCCTTTCTCCGCAGGGACGCAGCGGGGAGCAGGGAGGGGGACAGCCGGGCGTCTGACCTCAGCCTCCTGGGGTACACGAGCCGGGGACCCCTTGAGTTTTTCTTGCCTAAGTTATTTGAGTCACAAAGGCCTCGTCCCCCCCCCACCTCCTGTCATCCGGGTGGTTGGGTGGGGTCGTGGATTTCGGGGAGGGGGGCTCTAATGTACAAGGTCTCCCCTGCCAAAGGAGGGGGTAATCCTGGTGTGTCGTTTCCTATTTCTTCCCATTTCCAGCCACGCCCCGCCCCTCCGCCCGGGGGACACGTGCGCATTGGCCAGGGAGGAGGGCTCCCTGGCGGTCCCCACCGCTCACACGCATCCAGGTACCCGGTTTGCCCGCGTGGCTTCAATCTGTCCCTGCACCCGTCGCTGGCAGGGTCCGCGTCTCTCCAACGCCCCCCACAGGCCAAGACAGGAAACGCAGGGAAAGGGCGGCGTGAGCCTGCCTCCCGGGACCCCCCACCTGGCAGTGCGTGCCTGCGGGCACCCGTGTCACATCCGTGTGTGTGTGTGTGTATGTGTGTATCCCTCTCCGTGTCCTATGTCCCTCTGTATGTGCTCGAGTGAGAAAGATTTCAAAAGCCTCCAGTCCCTCGACTGAAATCCGAGCACCTCCCAAACAAAACCGGGATCTTCCTTCTACCCCCTTCCCCAGCCAGTCTTCCCCTCTGTTCTTCCTGCCGCCAGCCATCCGCGCCAGATTTTGAAATCTTGGAGACAAAACTAGTACTGTAAGATAAATTTTTTTGTACTGTATTTATTGTGTATAACGATTTTTTTAAAAGGAGAATTCTGTACATTTAGAACTCTTGTAAATTAAAAAGCGATCCTTTTTTTAAAACTGTA EMBV3_18544 GGAGTATACCTTAGCTCTGCTGCTACCCAAAGCTCACATTCAAGTGCAACGGCCTTGGTG Gene GeneID:788031|LOC788031:XM_002688650:26_cdna Constitutive 0 NULL GeneID:788031 7 GENE LOC788031 NULL similar to Olfactory receptor 7A10 (Olfactory receptor OR19-18) (OST027) EMBV3_35200 CGGACGCTGGTTCATGTGGGAACCACAACAAAGATACTTTTGCGAGAACATTTAAAAGTA Gene GeneID:617935|CUL4A:XM_002692015:17_cdna Constitutive 2 NULL GeneID:617935 12 GENE CUL4A NULL cullin 4A EMBV3_19650 GCAAGAGAAATGCTCACAAGAGCAGTAGGGGTTGGGGGAGAAAGAGCAGAGGCCCTTGTT Gene BVT0102_208326 + 0 NULL GK000002.2:512435-646025 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22966 CTGTTGAGCTGCATTCATGTTCCTACAAGATGTACATAAAGTGTTGGTCCTGTGAGACCG Gene BVV0102_309100 + 0 NULL GK000013.2:28620270-28631454 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042399 TCONS_00042405 TCONS_00042402 TCONS_00042401 TCONS_00042404 TCONS_00042400 TCONS_00042406 TCONS_00042403 1 XLOC_025660 NonCoding TCONS_00042399 XLOC_025660 NonCoding NonCoding - 13:28628772-28631133 - TSS31569 2361 2 TCONS_00042399_4 120 1 0 1.3467881752262e-183 0 6.32236827179869e-46 1.58390819799073e-192 3.0752451474109e-146 0 0 7.70907777667619e-136 1.72305429433117e-21 0.000129667731640998 0.000435794877358576 3.84489842171643e-05 7.50595863156375e-06 2.30242018582692e-99 1.93166000804122e-175 0.000318728173912631 0.00101815543703974 0.000231137089434876 0 1.02472638077844e-142 0 4.98071898354375e-78 6.34432950772682e-186 0.000108848846835884 1.40281261051033e-96 2.29742861470991e-216 0 6.7580975239598e-05 6.51371949851461e-05 1.20865769368829e-05 XM_005214177.1 FRMD4A PREDICTED: Bos taurus FERM domain containing 4A (FRMD4A), 0.0 2937 100.00 0.689114781872088 NM_018027.3 FRMD4A Homo sapiens FERM domain containing 4A (FRMD4A), mRNA. 0.0 1236 82.03 0.543837357052097 0 noncoding 0 0 0 0 -0.0460325180429305 0.760466011289644 -0.0104808869988544 0.824950988968846 AGGGGAGTGTGTGTGTGTGTGTGAAACGGGAAAGTTCCATCTTCCTGTGGGTTGGTTGCTTTCAGGTGATAGAGCTTAATAGGAGACAGTAGATTTATTTCCTGAGCAGCAACATGTTTACATGTAAAAGACTTATTAACAGAAGATCCTATTTGTTTGAAATCAGTGTTGATTATCTTTTGATAGGAGGCCCTGGTAGCTTTGCCAAGGACAGACAGGCTTTGGTGTAAGATGCTGTCCTGATGGGCTCGCTTCAGATGTGCTTTGAGTCTGTTCTCAGTGGCTTTTTTCCCTTTCTGGGAGGGTTAGCCCACACTAGCGGCAGATGTTTCAGCCAGGCTCTCCGTCCTGGGGTGCTTTTGCCCGTCAGATTTCTAGTTCCTTGCTAGTGAGGAGGTGCAGTGTGGGTTAGGGGGCCAGGGTGCGACGGCAGCAAAGGCTCCCACTAAGTCAGCCCGTTACTGCTGTGTCCCTCAGTGCAGGGCTTTGTACCTGCAGGCCCAGCGGGCTGTTGCTTTGGTGATAGGATTTGGAGGGTGGGGGATGGAGTCTGAGCTGTGGTACAATGAACAGCAGTGGTAGGAAAAAGGCTGAGCTGCCTGCCTGTCTCCTCAGTTGGCCTGTCAAAAAAAGGAGCCCGATGAGGACACAGGCAACTGAATTACAGCTCCTTGGAGCGTACATAGGCATTGATCAGTTAGACACAAACAGAATGTCCAAGAGGCAGCTGAGATCTTTTCATTTTGAAAATGCTTTAATAAGTGTTGACAACACTGTTTTGCAAAATGTAAAGGTACTATACAAATTCTTAATACAAAAAGAATAAATTAAAAGCAGATTTCTTTTTAATTCTGCAACTTTGTCTACAACATACATCTTTGTCATTGATTACAGATGAACAGAATCCAGTAAAATCATCTTACATGCTCTACAAGTCAGTTTCAGGAGCAACCTAATCCTTTCCTCCCCATTATTAAACTAGAGTCCGTTTTACACAACTTGTAATAAACTATTGACATGAATGTATATGTAAAACTTTACACCTAGTTAATTAAGCAGTAACTGGTCATCTGATAGCACCTGGATGGGGTTTGCTCTATGAAGAACTAAACTAATACCGAATGAAAACAAAGTGGAATTTGAACAGTTGCAACACTCACCTGCATATAAGAAAATTAAAAAACCCACCTGTCTCACAACAAAGGCTGATGTAGGTGTTTTTACCAGCCTTCTGGCTCAACAGGCAGTTTCTTACACGTATCCAAAGAATCCAATAGGGACTTTATTTCAGACCAGGGTTTCGTATTTCCTCTTAGTTTGCTTTAAAGAAATAGGGAAATATAAAGAGCTTGCCAGTGCTTGTGTACAATAACTATATCACTTCCCACCACACTGATCATTAATCATGTCGGTCTCACAGGACCAACACTTTATGTACATCTTGTAGGAACATGAATGCAGCTCAACAGTAAAACCTGTTTTACTTAATCTCCGTCTTTGCTACCAGACTATCAGGATGTTCGTCTGAACTGTAATTCCACCCGCCTCCCCCACCTCCACTCCTTTCTGCCTCCTGAATCCCAAACCCACGTGTTGAGAGAGAATTTTTGTCTGTCATTCCTTATAACCCAGCTGGGCTAAAAACTTGATCGAGATGACTTCCAACTTGATTTCAAACTAGTGTCCCTGTGTATGCCCTGTAGCCATATAAGCTTGTCACCTCCTCTAGTTCCCTTCTGACTTTTAACTGTGGCACAGAGTTCAGTTTGATTATTTGTGCATCTTCTTTTGGGAGAAAGAATCTGGCCTCGTAGAGACTTGTTTCCAAATGGGAAGGGAAAAAACTTGCTGTTTGTAACTCTTGACTGTCAAAGTAAGAGCAGCACCGCTCCCCCCATGTCAATCCCCAGAATCCTTTAATAACATTATCATCAATTTTATTTACCCTGCAGGGTCTACCCCCAGAGTGTTCTATGAATATTACTCCCTTCCGCAAGCTGGTATCACCAACACAGCCAGGGAGCCAGGCCCTGAACCGTCCCAACTGGCCCCAGCCTGCTCCGCACCCCAGAGGAATCCCACAGTGTTTTCCGAGCTGCGGCGGGGGAAACACCGTGGTTGTTGCGTTTTTAACCACTGGTAAGTATCCATTCCTACCCTTCTGGTCTGGTAGAGTCTATTGTTATTCTTGGATTACATATACATTAAAAAAAAAAAAAGACTTTTCTTTTTATGCTAAAGCTAGCTTCAGTTCTGCTTACCCACAAATCTACAGCCAACCCAGCTCCTGTCTGGCTGTCCACTGCCTTTCCAATAGGAAAAGTCATTATAAGTGAGAAAAAAATTAACCCCCCCCCACAC TCONS_00044877 TCONS_00044876 r 3' 258 TCONS_00044877 TCONS_00044876 r 3' 2618 EMBV3_32326 TTCTCTCACGTTTTCTTGGAGGTGGGGTTTGAGTAGAAACCAGATGATGTTCGCTGCTGA Gene GeneID:535449|MTFR1:NM_001035412:31_cdna Constitutive 2 NULL GeneID:535449 14 GENE MTFR1 MGC127123 mitochondrial fission regulator 1 EMBV3_23076 TGGCCAACCCAATACTACAGTACCTCCGTAACTGACCTGTTTCCATGCTTCCGGTCTCTG Gene BVV0101_046317 + 0 NULL GK000030.2:128040605-128132503 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33245 GCACGCATACACTGTACACATGCATTTCACAGTGGAAGGTAGGGCAGGTGGAGAGAAATC Gene BVV0101_048545 - 1 EMBV3_17316 GK000016.2:36290570-36478829 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20175 CTTGGAAGAAGATGATGAGGACCTTTCTCCAGGCCCCGAGCATTCCTCTGACTCCGAGTA Gene GeneID:540173|ZNF428:XM_002695081:505_cdna Constitutive 0 NULL GeneID:540173 18 GENE ZNF428 NULL zinc finger protein 428 EMBV3_28747 CTCCCACCCTCTAATGGACCTCCTCATAGAAGCCCCATTTCACTTTTGTTTATCTACCTC Gene BVV0102_118468 + 0 NULL GK000019.2:38100231-38137126 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34819 CAGGAGTCCGTGTCTGGTGAGGAAAATCAGGAATGGGTCAAAACAGTAGCCCGAGTGTCT Gene GeneID:613855|BAG1:NM_001076291:55_cdna Constitutive 0 NULL GeneID:613855 8 GENE BAG1 MGC139727 BCL2-associated athanogene EMBV3_12294 CAATTCCTGCACCTGTTACCAAAGCATCTGGTTCCTCCTTCCATTGGTTCCTTCTGGTCC Gene GeneID:534114|RIMS1:XM_002690015:48_cdna Constitutive 0 NULL GeneID:534114 9 GENE RIMS1 NULL regulating synaptic membrane exocytosis 1 EMBV3_16403 TCTTGTCTATGGTTGATACAGACCTCTAGTGTCTTGGCTTCGTGTTTTCCCACAGTTTCC Gene GeneID:100295682|LOC100295682:XM_002695460:134_cdna Constitutive 0 NULL GeneID:100295682 18 GENE LOC100295682 NULL similar to vomeronasal 1 receptor, D9 EMBV3_40170 CTGGGTTCAGGTGCCGCGCAGCTCTCGCCGCTTGGCCGGACTGAGCGAGTACAGAACTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07036 TTCAGATGAACGTAGCCAGAGAGGACGGAGGAGCTAGAGTGAAAACCCTTGGCCCCTAGA Gene BVV0102_044664 + 0 NULL GK000016.2:1794808-1837393 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070608 1 XLOC_042386 NonCoding TCONS_00070608 XLOC_042386 NonCoding NonCoding - 16:1803253-1806225 - TSS52452 2972 5 TCONS_00070608_3 67 0.0218707940780619 1 0 0.000466951103261381 0.000632253536491763 0.000289577248519978 0.00027103104615726 7.64166096315068e-05 0.000250346102785986 0.000103997511017826 0.000310463167832833 0.000254862988739915 3.59948679778938e-05 1.00132660122111e-05 0 1.15852715003761e-05 0.000174104377951901 1.15556220032576e-05 0.00217726571026096 0.000536278691335834 0.00117349685669743 0.000366749498592759 0.000631549363872446 0.000598565539696187 3.74528280421303e-05 0.000463024902235233 0.000953303884595277 0.000993113429640789 0.00131687589572414 0.00031148955879119 0.000148666643272317 7.02381640732802e-05 1.01148121663408e-05 XM_005216701.1 LOC101907832 PREDICTED: Bos taurus pleckstrin homology domain-containing family A member 6-like (LOC101907832), mRNA. 0.0 5360 100.00 0.999663526244953 NM_014935.4 PLEKHA6 Homo sapiens pleckstrin homology domain containing, family A member 6 (PLEKHA6), mRNA. 0.0 1572 74.22 0.836810228802153 0 noncoding 0 0 0 0 -0.585271044965183 0.0437203542533019 0.00159387393835397 0.974928980552108 TTTCCTTGTAGAGTTTATTGTCTAATACTAGCAAATCAAATTGGCCCCAATATGTGCATAAATAGATATATGTATATATACGTATATTTCATATTTTCCTTAGTTTTAAGAGCTGCCAGGTGAGGGGCTGCCTAAAGGGAAGGGAATTACTTCTGTCTTGCTACAGTCGGCCCTGCTCCAAGAGCATCCCTCTCACCAACACAGGTGAGCAAGTACGCACAGCCTTCAACCTCAGAAAATCTCTAAAGTGACAACATTAGTACTTGATTACAGCCTCCTGGTTATTGTTGAGGGAGGTAATGTGTTAACTGGGAAGGCCCTAGATTGGTAACCAGGGCTTTCCCCGGGTGGGTTACTTAGCTCTGGGCCCCCAGCCAGGCCCCCTTCATTCCTAGCAAGATGTTTTAAGCTCGGAATAGGGTGCCAGCAAAGGTCAAAGTGGGAGGCCAGGCTTCAGATGCTGGCCAGGAGCTCTGTGCTAGGCTCCAAAACCTTTGATTCCAGATCTGGACAAAAGACTTCCATTCTGCCCAAATCCTTGCAAAGCAAGAGCCCCTTGCCCACTTCAGCAGTCACTAAGCAGTTTGGAAGGCTGAGCTGGCTTAGTTCAGGGCCCCAGCAGCAGGAAAGTCCTGGGCAAGGCTGAGATGCACCTCATCCTTCGGACCCTCAGGGCTGACTTCACAGTCTGGATGCCAGACTGGGGTACCATCCCCTTAACAACGGGCCCCAGAAGAAAGGTCACAGAGGGAGGCAGGTGCTGTAGATGTCACTCAGACCAGAGAGGGACCAAGTGAAAGGAATGTGAGAAGTCCAAGGAACTTGAATGTGTCTGCCCCGAAGGACCAGAGATGTCACACTGTTTGCACTGGCCGTTGCACCATACCCTGGGTCCATCAAACAATAGACCGACATTCTCAGTGCTGTTTGGCATATTCCAGCAGGGTGATAAAGGTGGTGATCCAGGAGCACATCTGGGGCGTGTATGCCTGCAAGGGTCTGCTTTTGTGCACACAGCTGTAAACATTTCCTTCAAGAAGGTTCACATTCAATAACCCTAGAGAGTCATCAAAAGTTGACAGTGTAATCAAATCCTTAGACCAGGACTGCAAGAGAATGTCCTGCCCTGGCAAGATCCTCTCCGGCTGAGTTCTGGGGACCAGCCCTTGGCAGACTGGGAATGGGAAGGAGGAGGCTGCTGAGGAGGAGGGAAGGGTGGAGGGCGGGACCTAGAGGCAGCCCCCCAGTCCCTCACATCGTCTGCCAATTCCATTCAGACATTGCACATGTGGAAAATAGATTTGCTTTTATAACAAAAATGTAAAATAGATCTGTCTTAAAATAACTCCTCTCCCCCTCTTTGGATCAAAAGGCATGGGGTATGGCCACAGTATGCTTGGAATGATGTGGAAAGGAAAGGAGAGAAAACGGGCCTGGGCAGGAGTTTCAGGAAAGGATCAGATGTCCAAACAAATATATATATATATATATTACATATACATCTGCAATATGATAATCTTCACAAAACATATATTAAGGCATGTAAAGCAACATAAAGAGCCAGCTTTATGAAAAAGAGGTGAAAGAGAGGTCGCAGAGGGGCAGACATTAATCCTTGGTATTTCACATGTATTTCTAAAAATATCACTTAAAAAAAAGACACAAAGAAAGGGAGAAGGCGTGGAAGGACCCCCAAAATCTGCTTTTTATGGATGGACAAGGTGTGGGAGAAGATGGAGAAGGGAGAGAAGGTTACCGGGGAGCTGATCCCACCTGTCAGTCTATGGGGGAGAAAGGACACGTTTGGGGTGCTTGAGCTGTGCTGAAGATGGGAGATGCAGCCAAGGGTCACGTTTACAAAAACCTGCTAGATGTGAGGGTGAGCGAATCCTCCTGTCTGTAAACCCTCCGAAACATGGGAATGTCTTAAGCACCTACAACAGCGCCTGGTACATAAAAGGTGCTCAGGGAATATTTGTCAAGTGAATTGTCAGCTTTACTCGCATATGAACCATAACTGTCCCAGCCACGAAGGAGTGGAGAGGAATTGCTAGAAGATGAAGGAATCGTTCTCAGGGTCTCTGAAGCTCAGGTTGAAGTCTCGGGGAAGCACCCCTGGCAAAGAGAAGGTCTAGGGGCCAAGGGTTTTCACTCTAGCTCCTCCGTCCTCTCTGGCTACGTTCATCTGAAGGTGGTGGAGCGGAGGGACAGCAGGCTTTGCTCCTGTCTCTCTGCCACTGGTCCCCTGGCTACGCAGGGTGTGAATGAGCCACGCGAGAAGTGAGACCCTCCAACAGCTTCAACTTGTCCCTGTGTGGGACGCCTGGGATTGAGAGGAGGACTCCAGAATCTGGCCTACCAGGCTCAGGCCACATCTGCTCTCCTGGGACACACGCTCAGCTGGCCCACAGCACATTCCAGGGGGAAGGCGATGAGATGGTGTCACAGAAACGTTTAGGGAAGGCCCCGTGGCTGATCACACGCTCCACACCCCGACCACCCCACACCTTCTGGTCTTCCAGCAGGACCAAGACAGGTCCTTGTCTCTGCTCCTGACCCCAGGACAGGGAGGCCAACATCAGGCCCAGATCCAGAAGAAGCTGTCCCCAGCCCACGCTCCCTGGGCCCTCAGCGCACACCTCCTCCCCACAGCAGCGTGCTCCGTGGGGGTCCTGGAGCTGGCAGCCCCCGATCCCGGCACAAGGTGGGGAGAGCTGAGCTGACACCTGGCACTGTGCCTGGCACTAACCTGAGGCTCCACCCCGGGGAAACCGACCCCATTCCCTTCTCATCTCTGTCCTCCCCCTCCTCCCCGCACACGAGTCCTGCCAGTCCCTTTCCTCCTGCCCTCCCGAGACCTCTCCCCTTCTCTCCGCTACCCCTTCTCAACCTGCCCTCAGACGCTGCACACACTTGCCGCTTCCCACCCACGGCCAGCGCTCCCCTCTGGGAGCCGAGGAGCCTCTCCCATC TCONS_00068453 TCONS_00068454 TCONS_00068455 TCONS_00068456 . 3' 1172 TCONS_00068453 TCONS_00068454 TCONS_00068455 TCONS_00068456 . 3' 4143 EMBV3_43541 CATCATGGGTGTGGTTTCTTTGGTGTTTCTGACCACCGAGCAACAGCAAAGATTCCATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06643 GTATGCCATTTTTCCCTGCAAAGCAGTTCAATAAGAGAAGCCCTGATTCAAAATGGGGCT Gene GeneID:526705|RANBP6:XM_002689608:23_cdna Constitutive 0 NULL GeneID:526705 8 GENE RANBP6 NULL RAN binding protein 6 EMBV3_20788 CAGAGCTTGTTCTAAAGTAGTCTGTGGGTGCCGTGCATGCTTAGTTGGCAGTCTGCTCCC Gene GeneID:533736|NGLY1:XM_002698745:23_cdna Constitutive 0 NULL GeneID:533736 27 GENE NGLY1 NULL N-glycanase 1 EMBV3_11343 CCGCGGGCCGCGGGGCCGTCGCGGGCCCAAGAATGCACAGATGGCTATGAGTGGGACCCT Variant GeneID:535222|EFEMP2:NM_001076049:66_cdna 117^234 1 EMBV3_17423 GeneID:535222 29 GENE EFEMP2 MGC139987 EGF-containing fibulin-like extracellular matrix protein 2 EMBV3_13637 AGTGCAGACTCTGGATTCTCAGGGACACTTGGACTGGGTTTATTTTTCTATGCAGACACG Gene GeneID:767864|IL10RB:NM_001076975:61_cdna Constitutive 2 NULL GeneID:767864 1 GENE IL10RB NULL interleukin 10 receptor, beta EMBV3_03845 AACCCTGCCACCTCAAAGCCATAATAAGAGCGAACTGAACAGAGGGATGTAAGGAAAGCA Variant GeneID:509047|TTC4:NM_001015554:34_cdna 497^621 1 EMBV3_42662 GeneID:509047 3 GENE TTC4 NULL tetratricopeptide repeat domain 4 EMBV3_39060 CGGTTACAGCCTTTCGAGTTGAACAAACTTGCTGCCGGCGGATTGGTGACCGGGAGCTCT Gene GeneID:100336927|LOC100336927:XM_002689401:38_cdna Constitutive 0 NULL GeneID:100336927 7 GENE LOC100336927 NULL G protein-coupled receptor 150-like EMBV3_22904 ATGTGTTAGCAGCAGTCACTCAGCTCTTAGCTGTGCTCCATGAAAGCCACTTTGGATGGC Gene BVT0102_156136 + 0 NULL GK000009.2:97310569-97392609 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238146 TCONS_00238145 1 XLOC_144902 NonCoding TCONS_00238145 XLOC_144902 NonCoding NonCoding LOC100848019 9:97390460-97395406 = TSS177884 2958 2 TCONS_00238145_4 68 2 0.402224469160768 0.00247919097633823 0.00271704711227816 0.00306588149691538 0.00180232391108332 0.00268556829688705 0.00129151502020537 0.00161071526323688 0.00252944264134726 0.00313683660830039 0.000350524739084595 0.000479043037617779 0.00025565288760254 0.00059946599566887 0.00133582264258855 0.000711419391676718 0.00886632159072537 0.00418142563942282 0.00647202742390792 0.0036994088938371 0.00355205131536721 0.0011302227963709 0.00248483260669123 0.00401944532377576 0.00424216800921911 0.00287865458750556 0.00298442649424693 0.00288003761644974 0.000938426053410615 0.000259291346807348 0.00163206630704733 NM_201527.2 SOD2 Bos taurus superoxide dismutase 2, mitochondrial (SOD2), mRNA. 0.0 1452 99.88 0.27315753887762 NM_000636.2 SOD2 Homo sapiens superoxide dismutase 2, mitochondrial (SOD2), 1e-119 435 74.48 0.218728870858688 0 noncoding 0 0 0 0 -0.0465098714195095 0.770975149527756 0.0491877378144555 0.403491888724843 GCAAGGAACAACAGGTCTTATCCCCCTGCTGGGGATTGACGTGTGGGAGCATGCTTATTACCTTCAGTATAAAAATGTCAGGCCCGATTATCTGAAGGCCATTTGGAATGTGATCAACTGGGAGAATGTAACTGCACGATACACGGCTTGCAGCAAGTAAACCGTCAGCCTTACACTGAGTACACCAAGCTCTTTCTGACTATTTTTGTAGTAGTGCAGAGAACCAGATAAACCAGTACGCTGCTCTGTTGTAGTGTTTCTGAGTGTGGCTTGTTCAAAAATTTGATAAAAATAATCCACTGCTATGGATAATCTCTTTTAAAAGTTTGTTATTAGGCAACTGTTTGAAAACGTTAAGTGCTTTGTATGATTTAGCTTTTTGATTGAACATTTTCTTCGGAGAGCTAAACTAGCTAGGAGGTGGTAGTTGTCATCATAAAACCATCAAAAAAAACTTCATCCCCATGAAGCCTTTCTAATCCTGTTCAATCACAGTTACAGAAAATCTAATCTTTTTTGCCCCAGTTGCTTAATAATAGAATATTAAATTTATTTCCCAAGGAAAATGCTCAGTTTTCTATTGAAAATTGCTCTGTTGGTAATCTTCTGCCCAGTATTGTTTCTGATAGTCACCACCCCGTGGTCTTTAATTATTTTCTGATCACATGTTACATAGGGTAAACACTAACCATTTTGTCATTAAAAATATATATGACTTGATTGCTGAGAATTGCTTTATTATGAGAAGGAAATAGTAGCGCCTCTGAATTTTTCTGTAGCAAGAAAAATAAAGACTTTTGTGAAATTTTGTCTTGAAGCATAGCAATGTGTGTTGTCTAAGCACTCAAAGGGGACAAATTACAGCCTGGTTAATAAAATCCACAATAGGACTGTGGCCACAGATCCTCTGGCTGGGCACTTACCCCTCTTCTTCCGGGTCTGTTCACGCCGCCTTCCTCTCGAGAGAACCAGGCTGGCTCAGGTCCTGCCTCCCAAGTGATGAAAGACATGTTGGTTTCTGGATGCAGTCAGATGCATGCCCCGCTCTGGAACATTTATTTGCAAAGACTTGTTTTTCAGTAATTTCTTCCATTTTGAGGGTTTTTTTTTTTGCTTTCTTTTAGAAAAGGTACAATCAATACAGAAGCTTTATATTGCTTTATTGGTTTTTCCAGTAAAAGGAAGACTACCCCTAATTCAGTGACACTGCACATGGCATTCCTGCTTAGTTTTTTCGACTGGAGCTGTTCAGAGCAGCAGGGTCCTTTCTGTATTTGGCTTCAGGTGTTCCCTGTCCATCAGATCCCTCCTCATCGTTAATGGCTGTATAATGCTTTATCAGTTGGACACTTCCTAATAAATTTTACAGTCCGATTACTGAAGGTTTCATTTATTTCTAATTGTTATTACAAATAATGCCATTATTTGTGGCAGTCCACATAGCTTTTACCTTTCTATGGGAATATTTTCTCTCTGTAGGTTTCTTTTCTTAAACTATTTAGTAACAGGGTGTTTACTCAAGCTTGCTTTTTCATGTTTTTTCAAATTTATTTTTTCATTTAAAAAGTTTCCCCCAACTCTATTATCTGTGGGGTTTTTTTTTTTTTCCATAGAAAAATGGAGTGACTTAGCAGTTTTAATATTGAAGACTGAAGTTTTTTAAAAAATTTAAATTCAAGGCACTTTTCTTTTAGAGTTCAATTAGAAAAGCAGTCCTTCTGAATTGTCAACAGCATTTATGAGACTAGTGTTAACTGTGTGTGTGTGTATGGATTGAAAATGACTCAGAGACTATGATCGCCATCCAAAGTGGCTTTCATGGAGCACAGCTAAGAGCTGAGTGACTGCTGCTAACACATATCTTATATATACATATATGTGCCTGTATATATAAAGGCGGTTGTGTGACCACTTGTTACATGTATCCTGTATACAGGTATACATGCCTATATATATAAACAAGGCAGTGAACTCTGTAAACAGACTAATGAGGAAATAGGACCTTTTTGAAAGATGGGCTTTTGACTACAAGTGGTCTTCTAGATCATGAACTATCAAAGATAATGCACAGACTACGGACATATCAAGCTGTTGGACTCGTACTAAGCTTTACGACTCACAAAACATTCAATGTTGAAACTTCTATGGGGCTCTATTTTTGCTTTGATTAAGTGACAACAAGAGAAAGCATACTGTCCTCCACTAAAGTTTTGGATTTTAAGAGACTTAAGATGACATATGCAATACAGATTTTAATCATCCAGCAGAAAATAAGATTCTAAGATTCGGTTTAGCCCTGTTTTTCATAGTAGAAAAGAAACAGAAAAAGTAAAAACAGCATTTCTTCTGGAAAGGGCAAGGGCAACTCTTCCTGTTCACCCAGGAAGAGTTTTGTGACCGAAGCAGCAGAGCCTGCTCTAGTCTCAGACAAGCTGCAGAAACCTTACTTAGAATGGGCGGTGCCTCAGGGGAGCAGGACGAAGTACGAAGGGTGTTTGTGAAACAGAATTGTTGTGTAATAATGAAACTTTGATACTGAGAAATTACAGCTTCACTGCAAATCTCAGATTCATGATTCTAAAATGAGATTTGAGTTTCTGTTGAGTGCCTTGAAAAAGCAACATCGAAATCATAAAATTTAAGACTGATGTATGCTCAGTCACATCTTAAAACGAGGCAGAAGTACGAATTTTGTTTCTTGTTTTAATCGCAGAGGAACTACTCTTTGGGAAAGCTGTGAGGTAGCTGTTTTATAAATGACATCTCTCATTTTCAGTCACGCTCTCACAATCCCATCAAGCTGACATTCTGTGTTGTAAGGTACACGTGGTACCTACTAAATATCCTGTAAGGTCCTGCAAAGTTTTCATTTAATTATTCATTAAAGGAGCATTTATTTTCATATTGTAAGTGTGAAGTTTTTTGATTGCCAATAAAAGAATCTGTTTGCCACCAAAA EMBV3_41481 CAGCTGAGAACTGCCGCTTCACTTGAGACAGAAAACCCTCTCCTGGCCACACGTCCATGC Gene BVT0102_238076 + 0 NULL GK000018.2:63683297-63687552 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084829 TCONS_00084831 TCONS_00084833 TCONS_00084830 1 XLOC_051728 Coding TCONS_00084833 XLOC_051728 Coding Coding NLRP5 18:63666937-63685534 j TSS63496 5974 1 TCONS_00084833_5 1077 0.131904921325745 12 0.679393417939342 0.00124483965520131 5.73654871054522e-08 0.000915533219865844 3.44586129055968e-14 0.000271976411145237 0.000663500154273157 0.000295155811825298 0.00010699018245671 0.000355140277681552 0.000107608436904959 4.41711439441698e-09 7.77377621487984e-09 0.000272512330465071 7.05471545195312e-09 8.59253127229578e-10 1.91383346225075e-08 0 1.49539508789022e-24 0.00121108615877192 0.00265519090748479 0.000976986118717898 1.82180092506035e-10 6.35465307270649e-09 8.13903802912757e-06 0.000770150517183132 0.000425334223513831 0.00116936334439376 5.82499888799427e-15 2.19684901464758e-11 1.00192859075736e-17 NM_001007814.2 NLRP5 Bos taurus NLR family, pyrin domain containing 5 (NLRP5), mRNA. 0.0 5317 99.40 0.500836960160696 NM_153447.4 NLRP5 Homo sapiens NLR family, pyrin domain containing 5 (NLRP5), mRNA. 0.0 1166 70.32 0.434884499497824 TCONS_00084833_5 sp|Q647I9|NALP5_BOVIN NALP5_BOVIN NACHT, LRR and PYD domains-containing protein 5; 0.0 2166 97.54 0.999071494893222 5 coding 1 0 0 0 -4.08634298844185 0.00760822354935693 -0.019071240270954 0.687501327210206 TGGGATCCTGTCCTAGAGGTGAGGAGTCAGGGTGGTGGGCGTTTCCTCCTGCCTTCTCCCTGGAATCTTTCTCTCCCTGTTTTTCTCCCTTCCTGGTTGGAACCTACTCGCTGAGCCCTATTCTCTGCTCCCAGTCTCTCCAGTTAGACTCATCAGAGCCCAGGGACCAAAGAAACCCTCAGAGAGAAGGAGGTCCCATGGGCTTCGTTACCAAAGACTACTTTTCCATTCCACCTGAGCTCTCAGCCTTGCATCAAGATGAGAGAAGCCAAAATAGCCCCCTTATCCAATTACGGACTGCAGTGGTGTTTCGAGCAGCTGGGCAAAGAGGAGTTCCAGACATTTAAGGCCCTCCTGAAGGAGCATGCGTCAGAATCAGCAGCGTGCTCCTTCCCGCTGGTCCAGGTGGACAGGGCTGATGCGGAGTCCCTCGCCTCCCTCCTGCATGAGCATTGCAGAGCATCTCTCGCCTGGAAGACATCCACTGACATCTTTGAAAAGATGAGCCTGTCGGCACTGTCTGAGATGGCAAGGGACGAGATGAAAAAGTATCTACTGGCTGAAATATCAGAAGATTCTGCACCAACAAAGACTGACCAAGGTCCAAGCATGAAAGAAGTGCCAGGCCCCAGAGAGGACCCACAGGACTCGCGGGACTACAGGATCCACGTGATGACGACATTCTCCACCAGGCTGGACACACCCCAGCGCTTTGAAGAATTTGCCTCCGAGTGTCCGGACGCGCACGCGCTATCCGGGGCATTTAACCCAGACTCCTCGGGGGGCTTCCGGCCTCTCACGGTGGTTCTGCACGGACCCCCGGGGGTTGGGAAGTCCTCGCTGGCCCGGAGGCTCCTACTGTTCTGGGCGCAAGGCGACCTCTACAAGGGCTTGTTCTCCTACGTCTTCCTTCTCCGCGCCAGAGACCTCCAGGGGTCCAGGGAGACCAGCTTTGCGGAGCTCATCTCCAAGGAGTGGCCGGACGCCCCGGTCCCGGTGGAGAAGGTCCTGTCCCAGCCCGAAAGGCTCTTGATTGTGGTAGATGGACTCGAAGAGCTGGAGCTCACCTTCAGAGACCAGGACTCCAGCCTCCTGGCCGACTGGGCGGAGAGGCAGCCCGCCCCCGTCCTGGCGCACAGCCTGCTGAAGAAAGTCCTGCTCCCCGAGTGCGCCCTCCTCCTCACCGTCCAGGACGCGGGATTGCAGAGGCTCCAAGCCCTGCTCCGGTCTCCCCGTTACCTATGGGTCGGGGGCCTCTCAGTGGAAAACAGGATGCAGTTGCTCCTCGGCGGCGGGAAGCACTGCCGTCGTAAGACATGCGCCTGGCACGCGGGGGCCGACCACCAGGAGGTGCTTGACAAGTGTCAGGTGCCCGTGGTGTGCGCCCTGGTCCGTGAGGCCCTCGAACTGCAGGGGGAGCCGGGGAAAGGCCTTCCCGTCCCCGGCCACACCCTCACGGGCTTGTACGCCACCTTCGTGTTCCAGCGGCTGGCTCCCAAAGATGCAGGCTGGCGCGCGCTGAGCGGGGAGGAACGCTGTGCCCTGAAGGGCTTGTGCCGGCTGGCAGCGGACGGCGTGTGGAACGCGAAGTTCGTGTTTGACGGCGACGACCTGGGCGTCCACGGGCTGCAGGGGCCCGAGCTCTCCGCCCTGCAGCAGGCGAGCATCCTTCTCCCTGACGGCCACTGCGGAAGGGGCCACGCATTCTCCCACCTCAGCCTCCAGGAGTTCTTTGCGGCCTTGTTCTACGTCCTGCGAGGCGTCGAGGGAGACGGGGAGGGCTACCCGCTGTTCCCCCAGAGCACAAAGAGTCTGACGGAGCTCAGGCATATTGACCTCAACGTTCAGCTGGTCCAGATGAAGAGATTCCTATTTGGCCTTGTGAGCAAGGAGGTGATGCGGGCCCTGGAAACCCTCCTAGGCTGTCCCGTCGCCCCCGTGGCTAAGCAGCAACTTCTGCACTGGATCTGCCTGCTGGGTCAGCACCCTGCTGCCGCCGCCTCCCCAGACTTGCTCGAGGCCTTCTACTGCCTTTTCGAGACACAGGACGACGAGTTCGTTCGCTTGGCCTTGAACGGCTTCCAAGAAGTGTGGCTGCAGTTGAACCGGCCAATGGACTTAACGGTGTCTTCCTTCTGTCTCCGGCGTTGCCAGCATTTACGGAAAGTTCGACTGGATGTCAGAGGGACCCCAAAGGATGAATTTGCTGAGGCATGGTCCGGGGCTCCCCAAGGGCTGAAGATCAAGACCCTTGATGAGCACTGGGAAGACCTCTGCTCCGTGCTCAGCACGCACCCAAACCTACGACAACTCGACCTGAGTGGCAGCGTCTTGAGCAAGGAGGCCATGAAAACCCTGTGTGTCAAGCTGCGGCAGCCAGCCTGTAAAATACAGAATCTGATATTTAAAGGGGCCCGGGTTACCCCTGGTCTCCGTCACCTCTGGATGACTCTGATTATCAACCGGAACATCACGCGCCTGGACCTGACGGGCTGCCGCCTGAGAGAGGAGGACGTGCAGACGGCGTGCGAGGCCCTCAGGCACCCACAGTGTGCGCTGGAGTCTCTGAGGTTGGATCGCTGTGGATTAACCCCAGCCTCTTGTCGGGAGATCTCCCAAGTGCTTGCTACGTCCGGCAGCCTGAAATCCCTCAGCCTCACGGGAAATAAGGTGGTGGACCAGGGTGTGAAGTCTCTCTGTGACGCCTTGAAGGTCACACCCTGCACCCTGCAGAAGCTAATCCTGGGGAGCTGCGGGCTCACAGCCGCCACCTGCCAAGACCTGGCCTCTGCTCTCATCGAGAACCAGGGCTTGACACACCTGTCCCTGTCGGGCGATGAACTGGGGAGCAAAGGGATGAGCCTGCTGTGTCGGGCCGTGAAGCTCTCCAGCTGTGGTCTGCAGAAGCTGGCACTAAACGCATGCAGCCTGGATGTGGCTGGCTGTGGCTTCCTCGCCTTTGCACTCATGGGCAACAGGCATCTGACGCACCTGAGCCTCAGCATGAACCCCCTGGAAGATCCCGGGATGAACCTTCTGTGCGAGGTCATGATGGAGCCGTCCTGCCCTCTCCGGGACCTGGATTTGGTGAACTGCCGCCTCACCGCCTCGTGCTGCAAGAGTCTGTCCAACGTGATCACGAGGAGTCCGCGCCTGAGAAGCCTGGATCTGGCCGCCAACGCCCTGGGTGATGAGGGGATTGCGGCGCTGTGCGAGGGACTGAAGCAGAAGAACACCCTGACGAGACTCGGCCGCCACCTGGCCAGCCTGAACCTGATGCGCAACGACCTCGGCCCCAGAGGAATGACGACGCTGTGTTCTGCCTTCATGCATCCCACCTCTAATCTACAGACCATCGGGCTGTGGAAAGAGCAATACCCGGCCCGAGTAAGAAGGCTGCTGGAGCAGGTGCAGAGACTGAAGCCCCACGTGGTCATCAGTGACGCCTGGTACACGGAGGAGGAGGAGGACGGGCCCTGCTGGAGAATCTGAAGAACCTGAGAACCGCCCCGCCCACCCCCGCTCTGATTCGGGACCCTTCAGGAGACGGATGACGATTCCTGATCCTCACAAAGTCTCACTGGTGGTGGCTCCTGAGTATCCACTTCAGTTCGGTTGTCGGTGTCTGCCTCTGACGACGGCGTGTGCCCTTCATGTCCTGGGACTTCAGTTCTCTGTGAAGCGTCTGTCCTACCTGAACACACAGGGAGGACTGAATAAACACAGCATTTGGAAGAAGCATCCAGTGCCTCCTTGATCGGTGGGGGTGTGACTCCTGAGCAGACGAGGGAGGCCTTGGGTCTTTAAAAAAGTCACAACTCTGTTGATGTTTTTTCAACAAAAAATTTTTAAGTGCATATCTGAATTTCAAAGGAGGATGTGACTATCACTGAACATCAGAAGTATGAACACAATGTTGAATTTATCGCTTAGTGTAGTAAAGAACTGGTCTGCCAGAGTCTCCTCCTCAAAGCAACCACGAGGTAGGTAATATTTTTCCTGTTTTTACAGAAAAGGAAACAAAGGCCGATCGATGGACGTTGACATTGGCCTGGTGTCACAAAAAGTCATTTAGTCATCCTGAGAAAACTCTAATTTGAAAAAAAAAAAAACCTGCAGCCCAATATTCATAGGAGCACTATTTACAATAACCACATGGAGACAATCTAAGTGGCCATGATCGATGAATGGGTAAAGACGGCGCACAGGGAGTACTACTCGGCCGTAAAGAGAGCGAACGCTTGCCATTTGCAGCAGCGTGGGTGGGCGCAGGATGATCACACTAAGTCAGGAAGAGAAAGCGAATGCCATGTGGCTGTCACTCCACGTGGAATCTAATACTCGACGCACAGCTGTGTGCACATTTACTTCCATATCTGCACCAGGGAAAGGCAGGGCAAGAGGGCAGGGACCCACTCCCGGAGGGGTCCATCCCTGCCGTTCAGTCGCTCAGTCGTGTCCGACTCTGCCACCCCGTGGACTGTAGCTCACCAGGCCCCTCTGTCCATGGGAGTCTCCAGGCAAGAATACGGAGGGGGTTGCCATTTCCTCTGCCAGGGGATTACCACTGAGCACCAGGGAAGCCCTGGAGGGTCCCTTGGCAAATCCAGGGGCATCGCCCTGACCAACCAAGTTCGTCTGGCCATGGTGGGGTGGGGACATCTGTACTGCATCCTGGATGGCTGTGGGCTCGCCCTTGTCATTTTCTCCAGGTGGATAAAGTCGGGGGGCTGTGTGTGTGTGTGTGTGTCTGGTGTGAAGCCATGTCAGCTGGTCCTCTAAGCCACAAGTCCCCGAATGCCTGGCCTGGGGTCGCTGTGTAGAACCTCCCTGTTCACTGGGGGACAAGTCGGTGGGTGGATGAGTCCAGTTCAGTTAATCCCGCGGCCCCAGGAGCAGGCGCCCAGCCCACCTCCCTGCGCTCCCCCTGGTGCCCACGAGGTGGCGGCAGAGCGTTGCCTTTCCCTTTACACGCGCGGGAGCAGGAAGGATGGAGGGGTCCCTGGGGCCAGTGTCTCCCCAGCACCGCCGGCCTCCGGGCAGGATAACCTTTTGGGGGCGGGAGCCCCCCCTGAGCATGGCAGGACGTCAGCAGCATCCCTGGCCTTCCCCCCACTACATGCCAGGTGCACCCACGCACCCCTCCTCCTCTACCCTGGGAATTAGAGATGACCCCAGGGCACAGTCGCCTCAGCTGAGAACTGCCGCTTCACTTGAGACAGAAAACCCTCTCCTGGCCACACGTCCATGCCCCACAGGACGAAAGTGCCCTCCACACAGGCCCGCGTCCTCCTGACATGTTAGGGGGTGGCCACTGCCTGCTCCCCGCGGAGGAGGAGGGCTGTTTCCTAGACCCAAAGGTGCGGCTGCCTGAGTCACAGCCGCCAGAGCTTGGGAGCAGGAGGAGACGGGATAAATAAACCAAGTACGTGCCCTTGCTGGCTCACTGCACGCGCGCTCAGTCATGCCTGTGTGACCCGGTGGACTGCAGCCCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATTCTGGAGTGGGGTGCCATGCCCTGCTCCAGGGGCTCTTCCTCGCATCTCCTGCGTTGGCAGGTGGATTCTTGACCACTGAGCCACCTGGGAAGCCCCTCGAGCTCACTGAATGCCACATTGTGACAAGAAGTGAACTGAGGACTGGAGAAGGCGGGCGGCACCGCCTGGCAGAGCAGTGTGCCTGGCTCCTAAGTCCCGCACTAGGCTCCTCCCGGGACAGGAATCGAGGTCAGTGACCAGAGGAGACCAGGCACTTAGAGACACCCCAGGGGTCCCTGCAAACAGTTGTGACAGGCAAGTTTTTCTTTGCACAGAGGAGGCAGCGGAGGGTCAGAGGGGTTAGTTCACTTGCCCAGGGTCACACAGCCTCTCTCTGTGGCCCAGAATCTGGCCCGGGTGTCAGGTGCTGCCTCTGCCCGTGGAGGTGGGAACAGAACGAC EMBV3_40893 TCCCAGAAGAAAGGGGCTAGGCACACGCCTTGTCTAAACTAACTGGGAAAACTCATTTCC Gene GeneID:615161|FRMD5:XM_002696813:582_cdna Constitutive 0 NULL GeneID:615161 21 GENE FRMD5 NULL FERM domain containing 5 EMBV3_25631 TTCAGCTACTTTTATTCTATTTTTACTAGCAGATTTCCTCTTTTTAAATCAGTTCACATC Gene BVV0101_040412 + 1 EMBV3_28561 GK000009.2:52922730-53228693 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35258 GAAGCCTTTCTGGAGCAGAGACAAGCTGAACCTGCCCTCCTGGCACTGGATTCTGTTTCT Gene GeneID:618015|TMX4:NM_001099170:14_cdna UTR3_Alt 2 NULL GeneID:618015 13 GENE TMX4 MGC159915 TXNDC13 thioredoxin-related transmembrane protein 4 EMBV3_04055 ATGGCTCCCAAGAATTCCTCAGCTGGGTTAATGGGGTCATATTGTGAATGCCTCACTACT Gene GeneID:540286|DAZAP2:NM_001034701:110_cdna UTR3_Alt 1 NULL GeneID:540286 5 GENE DAZAP2 MGC127447 DAZ associated protein 2 EMBV3_27631 GTACTGGATTTCCAGAAAGTGAAACTAAAATTTCAATCCAGGTGCTGGTTTGCCAACTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03707 CTCTTCTTCAGAGTCATGCTACAGGAGCTACAGGAGTGCCTCAGTCTACTTACATCCTCG Gene GeneID:525878|EFCAB5:XM_002695705:303_cdna Constitutive 0 NULL GeneID:525878 19 GENE EFCAB5 NULL EF-hand calcium binding domain 5 EMBV3_07984 AACGACATGCTCGATGGCTACTCTGCCTCAACACTCAACCCCAGAAGCTTATTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_06224 CATCACCTGCTCCTCACGCTCCTCTTCCTGGTCCTGTCTGTTGGGTCAGGATTTACTCAA Gene GeneID:100298682|LOC100298682:XM_002698629:7_cdna Constitutive 0 NULL GeneID:100298682 27 GENE LOC100298682 NULL hypothetical protein LOC100298682 EMBV3_13195 AGCGCGTCAGGCGGAGGGAGCCGCCGCCAGGTGTGCAACAGAGGAACATGGCTCAAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32754 GGAACAAGGAAAAGAGCCATGGATGGTTGTGAGAGAAGAAACAAGAAGATGGTGTGCAGG Gene BVV0102_050198 + 0 NULL GK000018.2:47905604-47922965 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083615 TCONS_00083625 TCONS_00083626 TCONS_00083613 TCONS_00083624 TCONS_00083623 TCONS_00083627 1 XLOC_051306 Coding TCONS_00083627 XLOC_051306 Coding Coding ZNF850 18:47904320-47913386 j TSS62790 365 1 TCONS_00083627_1 60 4 0.960176503033646 0.000383799530390985 0.000510491045197133 2.08378040353347e-05 4.78698022207346e-283 2.72531315954319e-06 0 7.06237128061742e-07 1.33245395074724e-57 1.65248301420181e-17 0 0.000233411427888598 8.77698118741599e-05 0.000273070087126836 0.000312670781305029 0 2.77209956613217e-05 0 0.000242217517922418 0.000718185374748304 2.85887537566391e-05 9.36579264284249e-05 3.22037747829321e-05 2.12270280274627e-05 0.000285569916264142 0 0.000475769868536363 2.13864482216219e-05 0.000105091505550095 0.000130232295642227 3.73323331093725e-05 XR_226237.1 LOC101901900 PREDICTED: Bos taurus uncharacterized LOC101901900 (LOC101901900), 0.0 659 100.00 0.997260273972603 NM_001172677.1 ZNF607 Homo sapiens zinc finger protein 607 (ZNF607), transcript variant 6e-93 343 83.89 0.882191780821918 TCONS_00083627_1 sp|Q96SK3|ZN607_HUMAN ZN607_HUMAN Zinc finger protein 607; 1e-23 94.7 75.41 0.983333333333333 0 noncoding 1 0 1 1 -0.452552280000431 0.0907575103265778 0.0203568505198035 0.82688926095039 CTGGCTTTCTGGACATGTGCTTTTCTGTTAGAGGAACCTTGAGGACTAATCCAGTCTTGCAGGTCTAAAACCATTGTTCATACATCGACATTCAGGGATGTGGCCATACACTTCTCCCAGCAGGAGTGGGAATGTCTCAACCCTGTTCAGAAGAACTTGTACCAGGATGTGATGATGGAGAACTATGATAACTTGGTCTCACTGGGACATTCCATTTCTAAGCCAGATGTGATTACATTATTGGAACAAGGAAAAGAGCCATGGATGGTTGTGAGAGAAGAAACAAGAAGATGGTGTGCAGATTTGAATTCAAGATATGAAATAATCAGCTGTGAAAATGTACATATTTATTAAAAACCTTCATC EMBV3_32973 AGAGTTGTCATCTTTCAGCAGGAGCAGGAGAACAAAATCCAGTCTCATAGCAGAGGAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39579 CCCTTGGACGTCATCAAAATCCGCTTCCAGTTTTTGTCGTTTGAAGCGCTGACCGAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09026 AAGCGCCCCACCTGCGTGATAATGGTCAAGCCCCACATTCAGACATCTCTGTGGTCCCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30176 ACGCAGATGGTCGTCCACGAAATCCGAAACTACCCTTACCCTCAGCTTCACTTCCTTGCT Gene GeneID:537072|RNF165:XM_002697812:441_cdna Constitutive 0 NULL GeneID:537072 24 GENE RNF165 NULL ring finger protein 165 EMBV3_10323 ATCGTGACCTATAACGATGAAGGCGGTGGGGAAGAAGATACCCAAGCTTTTGACATCGGC Gene GeneID:541188|CDH9:NM_001105253:15_cdna Constitutive 0 NULL GeneID:541188 20 GENE CDH9 MGC157284 cadherin 9, type 2 (T1-cadherin) EMBV3_14338 CCTAGCACTGTAGCAGAGATATCCCTAGTCTTGGAATACGGAAATACTGAGAGGGTTGAC Gene BVT0101_039144 - 0 NULL GK000004.2:82893921-83035933 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182218 TCONS_00182217 TCONS_00182215 TCONS_00182222 1 XLOC_110797 Coding TCONS_00182217 XLOC_110797 Coding Coding VPS41 4:82705547-82897970 j TSS136209 4107 1 TCONS_00182217_4 838 29 0.978806997120911 0.00056752534193299 0.00251553855091332 0.00080159197622453 0.000771663832672099 0.00099961982314934 8.39020712562601e-05 0.000229074343250344 0.000117570565916665 0.000488865873568391 1.08804613269938e-15 4.36749161565531e-08 1.64243596887687e-05 5.53521842666164e-06 3.45028651303361e-05 0.00037707380827084 0.00355989914361425 0.00253466421159124 0.000900111876727327 0.000588102187021406 0.000346306100076901 1.02903029112109e-10 0.000587989627057678 0.000999587854421237 0.000894419211810012 0.000357602948701991 8.05051519352188e-08 0.000324172806664097 2.7342036023316e-05 4.4804825023234e-05 8.78863875203424e-05 NM_001083453.1 VPS41 Bos taurus vacuolar protein sorting 41 homolog (S. cerevisiae) (VPS41), mRNA. 0.0 4511 100.00 0.608716824933041 NM_014396.3 VPS41 Homo sapiens vacuolar protein sorting 41 homolog (S. cerevisiae) (VPS41), transcript variant 1, mRNA. 0.0 3696 92.70 0.61017774531288 TCONS_00182217_4 sp|P49754|VPS41_HUMAN VPS41_HUMAN Vacuolar protein sorting-associated protein 41 homolog; 0.0 1647 97.95 0.986873508353222 1 coding 0 0 1 0 0.397972305105313 0.0606781885718172 0.00157633065013663 0.973202431603432 GTCTTGTTTTCTCTCATTTCCGGGTGGATCAGGTGACTCCCCGGCTGCGCCATGGCGGAAGCAGAGGAGCAGGAAACTGGATCTCTGGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGTGAAGAGGAGCCCAAACTGAAGTACGAAAGGCTCTCCAATGGGGTAACTGAAATCCTTCAGAAGGATGCTGCTAGCTGCATGACGGTCCATGACAAGTTCTTGGCACTGGGCACACATTATGGCAAGGTTTATTTACTTGATGTCCAGGGGAACATCACTCAGAAGTTTGATGTAAGTCCTGTGAAGATAAATCAGGTTAGCCTGGATGAAAGTGGAGAACACATGGGCGTGTGTGCAGAGGATGGCAAGGTGCAGGTGTTTGGACTGTATTCTGGAGAAGAATTTCATGAGACTTTTGACTGTCCCATTAAAATCATTGCTGTGCACCCGCATTTTGTGAGATCCAGCTGCAAGCAGTTTGTGACGGGAGGGAAGAAGTTGCTGCTGTTTGAACGATCTTGGATGAGCAGATGGAAGTCTTCAGTTCTGCATGAAGGGGAAGGGAACATAAGGAGTGTGAAGTGGAGGGGCCATCTGATTGCCTGGGCCAATAATATGGGCGTGAAGATTTTTGACATCACCTCAAAGCAGAGAATCACGAACGTGCCCCGGGATGATATAAGTCTTCGCCCAGATATGTATCCCTGTAGCCTCTGCTGGAAGGACAATGTGACGCTGATCATTGGCTGGGGGACGTCTGTCAAGATATGCTCCGTGAAGGAACGGCACGCCAATGAAATGAGGGACTTGCCAAGTCGATATGTTGAAATAGTGTCTCAGTTTGAAACTGAATTCTACATCAGTGGACTGGCACCTCTCTGTGATCAGCTTGTTGTACTTTCCTACGTAAAGGAGGTTTCTGAAAAAACGGAAAGAGAATACTGCGCCAGACCCAGATTGGATATCATCCAGCCACTTTCGGAGACTTGTGAAGAGATTTCTTCTGATGCTCTCACCGTGAGGGGCTTTCAGGAAAATGAATGTAGAGATTATCACTTAGAGTACTCAGAAGGGGAGTCACTCTTCTACATCGTGAGTCCAAGGGATGTTGTTGTAGCGAAGGAACGAGACCAAGATGACCACATCGACTGGCTTCTTGAAAAGAAGAAATATGAAGAAGCTTTGATGGCAGCTGAAATTAGCCAAAAGAACATTAAAAGACATAAGATTCTGGACATCGGCTTGGCGTATATAAACCACCTGGTGGCAAGAGGAGAGTATGATATAGCAGCACGCAAATGCCAGAAAATTCTTGGGAAAAATGCAGCACTCTGGGAATACGAAGTTTATAAATTTAAAGAAATTGGACAGCTTAAGGCGATTAGTCCTTATTTGCCAAGAGGGGATCCAGTTCTGAAACCACTCATCTATGAAATGATCTTACATGAATTTTTGGAAAGTGATTATGAGGGGTTTGCCACGTTGATCCGAGAATGGCCGGGAGATCTGTACAACAATTCAGTAATAGTTCAAGCGGTTCGGGATCACCTGAAGAAAGATAGTCAGAACAGGACCTTACTTAAAACCCTGGCAGAATTGTACACCTACGACAAAAACTATGGCAATGCTTTGGAAATATACCTAACATTAAGACACAAGGATGTTTTCCAGTTGATCCACAAACATAATCTTTTCAGTTCTATCAAGGATAAAATTGTTTTATTAATGGATTTTGATTCTGAGAAAGCTGTTGACATGCTTCTGGACAATGAAGATAAAATTTCAATTAAAAAAGTAGTGGAAGAATTAGAAGACAGACCAGAGTTGCAGCACGTGTATCTGCATAAGCTTTTCAAAAGAGACCACCATAAGGGACAGCGCTACCATGAGAAGCAGATCAGCCTTTATGCTGAATTCGACCGACCCAACTTGCTTCCATTTCTCCGAGACAGTATCCATTGCCCCCTTGAAAAGGCTCTTGAGATCTGTCAACAGAGAAACTTTGTAGAAGAGACGGTTTATCTTCTCAGCCGAATGGGTAACAGCCGAAGTGCCCTGAAGATGATCATGGAGGAATTGCATGATGTTGATAAAGCGATTGAATTTGCCAAGGAGCAGGACGATGCAGAACTCTGGGAAGATCTGATTTTATATTCCATCGACAAACCACCATTTATCACCGGCTTGTTAAACAACATTGGCACTCATGTTGACCCGATTCTACTAATTCACCGTATTAAGGAAGGAATGGAGATTCCTAATTTGAGAGACTCCTTAGTTAAAATTCTACAAGACTACAATTTACAAATTCTGCTTCGTGAAGGCTGTAAGAAGATTCTCGTAGCCGACTCACTGTCCTTACTCAAGAAGATGCACCGAACTCAAATGAAAGGCATTCTGGTTGATGAGGAGAACATCTGTGAGTCCTGCCTTTCCCCTATTCTTCCATCAGACGCAGCAAAGCCCTTCAGCATGGTGGTCTTCCACTGCCGGCATATGTTCCACAAGGAGTGCCTGCCCGTGCCCAGCATGGAAGAGAAACTGAAGTCTTGGAGTTGGAAGTGACACTTCAGTAAAACTGTCCAGCCATAACATGGACTGCTGAGAGTTGTCCCAGATGGCTGAGTGCCGTACCACTGAGGCTGTCAGGCAGCACCTTGGACCTTGTTTTCATACCCTCTGCCAGCAGCCAGTCTCAGATTCTGGGTTTGGCTTTTTTTTTTTTTTTTCAGTATGTCATCAACTGTGCTTACCTTCCTAATTGGCATTGAATGAAACATTGTGCGTATTGTCATTGACTATGTGATGTCTGGGAATAACAAGAGCAGCCTGATGCCATGCAGTTTCATGTTGACTGATGACATGTTCTCTGTGTCCTAAGGACCAGCAGTGTCTGCCCTGGCAGGCACTCAGCGTTTGCTGATTGAATAAATGTCAGCTCTTCCCACTGTGAAAGACTCACTTTTACTGGGTTGTACAACTTTAATCAAGCACTCTGGCACCCTCATAAGGAATGGAAGAGAGTTTCAGCACCTAGAGTGTGAGGGAGTGGGGGTGGGTGTCGCTAGCAGGGAGGATAGGAGTGATGCTGTGGAATCAGAGAGACATGCTCAAGAGAAAGGCGGCTGTTACTGGAGGATGGGCATGACAATGTTTCCTGTAGCCTCCTTTGCCCTTGTAGAACATAGCATAAAACAAAGGGAGAGAATTCAAACTTGTGCCTATGTCTCATAGTTACTGGTTTCGTTTCCTTGGGCTACATTGCCATCCTCTAACCAGTGAAAAACACATATTCACTGTCCCTGCTCTCTTTGTCCCAAAAAAGGGAATAAATGCAGCTTTCTGTGTCTGCCTTTTTGGGGAGAGGATGGGATGCTAATGCCTACCAAGCACATACCAAATACTGAACTTGGTACAGTCGTTCCCATGAGCAGCATCTCATTTCATTCTTATAGGACTCCCCAGACTACCTCCTGACCCCAAGAAGAAGATATTATATCCCCAGGTTTACCAGCAGAGAAATCAAAGTGCAGAGATGTTATCACAAAGGTGACTGTCTCACTTCAGAGCTGGGCTCTGCTTTAAGAAATCACATGGCCAAGTTCAGAGGAAATGCACAGTACATCTTTTTGCACTAGAATTAAAAAGAATATTAAGTAGAAGACAACAGACTTCTCTGGTTAGTCGTAAATATTTAGAACTAGAAAGTGTTAGAGGTTACTGTCAACCCTCTCAGTATTTCCGTATTCCAAGACTAGGGATATCTCTGCTACAGTGCTAGGTTTTACTTTTAACCAGAGAAACTCTGCCTTCACAAAAAAAAACCTTACAAGTGATCCCAATTTGAAACATAGCTGAAAAGCAAAGCTACTCCACTTATATTTGAGAAGAATATAGTTGCTGACTTCAAATTTCATGTCCTTTCCTTAAAAGGTTTCCTTAGTGTGAAACCACTAAGTTCAAAGTTATTTTGTGGTAACAGTTTTATTTTTCTTTTGTCTTTAGCCAAAAAGACTTTATACTAGTTTAATTATGTCCATCTTTGAAAATTTTTGAGGCGTTCTTAATAAAAATGTAATTGGTTGTTCTAGTGCTAAATGATCT EMBV3_17981 GGCCTTTGTTGCTGCACTCAGATTTTCTCTAGTTGTGGCGAGCAGGGGCTATTCCTCGTT Gene BVV0102_187285 + 0 NULL GK000029.2:45063840-45110165 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16897 TCCCCCTCTGCTGGAGCTACTTCATTGGTTGGCTGGTGTTTATCCTGTATGTCATCTGTG Gene GeneID:517977|ODF4:NM_001075762:45_cdna Constitutive 1 NULL GeneID:517977 19 GENE ODF4 MGC151922 outer dense fiber of sperm tails 4 EMBV3_25886 CAGTCTACAGTTGTCCTCGCAGCGCTCACGGCCTCGCTTTCTTCAGGCTTCTACTCAAAT Gene GeneID:515451|LOC515451:XM_002698749:9_cdna Constitutive 0 NULL GeneID:515451 27 GENE LOC515451 NULL similar to rCG23123 EMBV3_27033 GACATCACCCTCATCATCGCTATCGACTGGGCTCTGGACCGTTTCCGCACCATGATTAAT Gene GeneID:523673|SLC1A7:XM_002686398:254_cdna Constitutive 0 NULL GeneID:523673 3 GENE SLC1A7 NULL solute carrier family 1 (glutamate transporter), member 7 EMBV3_30262 CCAGACCACATTGACGTTCCGTTTGCCCTTCTGTGGACCCAACCAGATCCAGCATTACAT Gene GeneID:506981|LOC506981:XM_002699096:95_cdna Constitutive 0 NULL GeneID:506981 29 GENE LOC506981 NULL similar to olfactory receptor MOR223-1 EMBV3_33874 CAGCTCAGCAGGTTGGTCTGCGTTGGGCCTCATGGAGGAGATTTAATAACCGAAGTATGT Gene BVT0102_184324 + 1 EMBV3_00667 GK000024.2:47255146-47271787 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140432 TCONS_00140433 TCONS_00140431 1 XLOC_085128 Coding TCONS_00140431 XLOC_085128 Coding Coding HDHD2 24:47255726-47297264 j TSS104818 2390 1 TCONS_00140431_1 144 0.0539748953974895 6 0.942605387967354 0.000433560596974341 0.000244588102139157 0.00089410312372671 0.000661324756501083 0.000413225331917688 0.000366895157727723 0.000101824098982012 0.000203020497511578 0.00026551934741776 1.87394111988162e-09 1.28869974730355e-08 3.29360534509063e-05 9.94807589999571e-06 2.82437683945678e-05 6.00859647144883e-09 0.00108717722035845 8.25546621392911e-05 1.10237048611242e-06 0.000108603689439981 0.00031993337964457 0.000158702799648281 0.000168993837244067 0.00015816438946353 0.000173032659087895 0.000383935674944389 0.000354064189765015 2.02600167920895e-12 0.000136179725752287 3.2783332532794e-05 0.000189960084824527 XR_239887.1 LOC100847542 PREDICTED: Bos taurus uncharacterized LOC100847542 (LOC100847542), 0.0 3314 100.00 0.768200836820084 NM_032124.4 HDHD2 Homo sapiens haloacid dehalogenase-like hydrolase domain containing 2 (HDHD2), mRNA. 2e-167 594 92.38 0.169874476987448 TCONS_00140431_1 sp|Q3ZCH9|HDHD2_BOVIN HDHD2_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 2; 9e-90 266 100.00 0.909722222222222 1 coding 0 0 0 0 0.0337215691108439 0.836683409270802 0.0173276092624488 0.719432983809395 GGCGCTGAACCTCGCGCTGGCGGACGGGAATGAAGGATGGCAACACGCCGTGCATTAAAAGCTGTTTTGGTCGATCTCAGTGGCACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCTCTTAAAAGGTTACGTGCTACTTCTGTAATGGTTAGGTTTGTGACCAATACGACCAAAGAGAGCAAGCAAGACCTCTTGGAAAGATTGAAAAAACTGGAGTTTGATATCTCTGAAGATGAAATATTCACGTCTCTGACTGCAGCCAGAAACTTGGTAGAGCAGAAGCAAGTCCGACCCATGCTGCTGGTTGATGATCGGGCTCTACCTGATTTTAAAGGAATACAGACAAGCGATCCTAATGCTGTGGTCATAGGACTGGCACCAGAACATTTTCATTATCAAATTCTAAATCAAGCCTTCCGGAAGCGCAGCTTTTGTGATTTATGTCAAAGAAAACTGTGATACAAACTTGCTCCATGCAGATAACTGCTAACAGGACAAGGGACTCTGCCACCGAGGCAAGTGTTTTAATGAAACACATTAGTGCAGTTTTAAAAATTCTTTATTATAAGTACCCAAGGACTTGAGTTTCATCCTACATGAACCACCAGTGATCCAAAATCAACTGAACATCATCAACACAGGTGTATTTTGACTTTCCTGTACAATTCACTCCTGTAATTTTTCAATGTGGAATTAGGGTTAGGTGATGACACCTGTCACTCCAGGGGAGTCTGTGACATCCACAGCCATAGGTGTTTGATGGAGCCGTTGCTGAAGGAGGTGGGCAAGCCCCCTTCTTTCGGGGCATCACTATCTGCCCTGAGAGGGGTGGAATGGTGGGTAGGCAGAGTCACTGCAGAACTCGCTGATTCTGGATGGTGAGTGTGAAGTGGGCACAACTGTATCTCCCCCAGGACTTGCCCTTCGCCCATCACACCGAGCACACACCTGGCTCACAGCAGACACGCAATGACCACCTTCCGACAGTGGATGTTCTCTAATGCCCTTTCCAGCCCTAAGATGTCACTTGGTCCCTTTCTGGGGCCAGGACAGGATTACAGTAAAGCTGATACAAACACTTTCCTTGGGGGTCAGTACCACAGGACAGTCCTTGAAATGTAATGGCTGGAAAATAAAGTCCTTTACATACTTCGGTTATTAAATCTCCTCCATGAGGCCCAACGCAGACCAACCTGCTGAGCTGGGAATGTTTCCAGTAATTTCAACACTGTGGACAGGTCGGTTAGAAAGCCCTATTTAACGTTTGTTAAATAAAACGGTAAACTAAGGTTTTAATGGCTTCTAGGGCCACGTGAGAGTGGAGGAAAGTGGAACAGCCACTTCTCCTGGCAGGGCTGGGTGCACACGGTGCCTTACCCTCTCCTGCCACGCACCTGTCAGTCATGTCTACTGCGTGGCTTTAGCTCTAACCTGTCCCCAGAGCATCAGAGCCATTACTTAAATGTCTAATGGGCCTCTTCTATGGACAGCAAGTCTAAAATGAAACTTATTTTCTCCTCCCTACCCACAGCTAAACGTTCTAGCATTAAATTCTTCTGATATTTACAGCTAAGTTTGATTGGTCCGGTGACTGCCTTAGTACCTGTTCTGTGCTGTAGCAGACACAGTCTTGTCTGGTGGGGAGAGGAGACGCGTGAAGGTCCAAGTGTAATCTAACAAGTGCAGCACAGAGGTGGGGACACTTCCTCCATTCTGCGGGCAGGACATCACAGGACAGGGACACAGGATCTTCACACTACCTTGGGCATCCTCCTGGGCCCCTCCTGGCCAGATCCTTCTCTTATACGCTTGCTTCCTAGCAGGCACTTCACACACAGCAGCGAGCAACACTTGAGAACGCCTGGGCCAAGGAATCGCTGCCCCAGGTGCTGGGGAACAGGCCACAGGTGAACATACCAGCAGCCTCTCTGCTTGCACGCAGGGCTTCCCCTCTTTGCAGCTCTGGTCTGAAGGAGTTCAAATATCGTAGAATGTCTCTTTTTTTAAATTCTCAGGAAGACCTTCCCCACTGAACTGGCTATAGAGATGAATTCTACCAAACTTTCCCAGATGGTTAAATGTGGACACTCCTGTATCTGCATGTCGTCATCGCAGACGTGGGAGACTTAGCATCTGCCTGATTCCATTCAAAGTCCTTAACACGTGGGCAGCGCATTTAACTCTCACAACACGCCTGCGTGGTGGGCACCGTGGTTATCTCTATGGAGAAGGGAGCAGAGGCAGGAGGGGCTAGGGGAGGGGCTAGGGTCCTGGAGGGGCGAGCTGGCAGTGCTGGCCAGGCTCTGCGCCCCTGCCACTGCCCCTCCTTCCCGTCCGGGTGGTGTCCCAGCACTGCTGTCTTTGGCACTCTGCCACAT EMBV3_05979 CCTGGCCATCACCCACTACCAAGACGACCCAGACCTGTGCTTCCTCATCGACCAAGTCCA Gene GeneID:617766|TSPAN10:XM_002696141:293_cdna Constitutive 0 NULL GeneID:617766 19 GENE TSPAN10 NULL tetraspanin 10 EMBV3_35231 AAGCACAAGGTGTCTATGGACCTGCGCGCCAACCTCAAGTCCGTGAAGAAGGAGGACACA Gene GeneID:100301375|LOC100301375:XM_002694115:445_cdna Constitutive 0 NULL GeneID:100301375 16 GENE LOC100301375 NULL similar to troponin I, skeletal, slow 1 EMBV3_14356 CTGCTATTTGTCAAATGGTCACGTTCCCTAAAATACTATATTTTTTCTATAAAAAAAAGA Gene GeneID:541140|KRAS:NM_001110001:46_cdna Constitutive 3 NULL GeneID:541140 5 GENE KRAS KRAS2 p21ras v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog EMBV3_15372 CATCAATGGTCATGCTGATAGCCCTGCTCCTGCGAGTGGAATTAACGGCCACAGTGAAGA Gene GeneID:517812|MCM6:NM_001046234:11_cdna Constitutive 0 NULL GeneID:517812 2 GENE MCM6 MGC134399 minichromosome maintenance complex component 6 EMBV3_07232 CACGTGGACACACATCTTGAGCCACAGACAACAAGGAGATGACAAGGGACTAAAAACAGT Gene BVT0102_090661 + 0 NULL GK000018.2:50870678-50913912 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086680 TCONS_00086683 TCONS_00086679 TCONS_00086682 TCONS_00086681 1 XLOC_052219 NonCoding TCONS_00086679 XLOC_052219 NonCoding NonCoding LOC100337138 18:50913084-50916750 = TSS64464 574 1 TCONS_00086679_1 69 0.973867595818815 2 0.843929058663029 0.000122467094369233 0.000619534430681318 0.00216970475093466 0.000320971023303388 0.000877012284380609 2.19640283319467e-05 3.21208434492803e-54 0 0.000157180683545312 0 0 4.75148797889947e-05 0.000978629586415187 2.5337937234378e-05 0.000867069566863408 4.60104818859513e-05 0 0 0.00251439612572328 0.000104898284083848 0.000124515704957857 0 0 2.92059437775194e-05 0.000293251334523374 0.000272378935728169 0.000376138190896601 0.00018670033011499 1.69150120951336e-05 0 XR_228511.1 LOC100848940 PREDICTED: Bos taurus uncharacterized LOC100848940 (LOC100848940), 0.0 1036 100.00 0.998257839721254 0 noncoding 0 0 0 0 0.413303730251882 0.0727177637150806 0.00275948963673261 0.958619651524324 ATGGAAGAAGTGAATGATGCCACCCACAAGCAGGAAGACCTGAGACCGGCTGGAACCACAAGGGTGATTGTGCTGCTCCCCGAGACCTCATCACAGACCCAACAGAAGAGCGTCCTCGAGTTGATCAGGCTCTGCTCCTTGAACAATGTTCTGGATTTCAGACATGCTGTGACCTGGGCTGCAGTGCTTCCACGTGGACACACATCTTGAGCCACAGACAACAAGGAGATGACAAGGGACTAAAAACAGTTCTACATACATGAACAGCTGGGGCAAATGATGCACGAGATAAAAAAAGAAAAATGATCAAAACTCCAATCACCCCTTTGGAGCTGGAAAATTAAAGAGGGTGCTGGACGTGATGCCTGTACACAGCACCACCAAGGGGCTGGGCAGATCTGGCATTCATCCCTCCTGCCCAATGCTGGACCCAGCCTGCCCTCATCCCACTTAATGGACCACATTTCCCACACGCGCCCCGACACCCCCTCACCCCCCAGGAGCAAACAAGGCAACTTGTCACATGTTTGACTCCCTTCCTCATGCACCCAGAGCCCCAATAAAACCTTGTCTG EMBV3_35732 GCCAGAGAATTCAAAGTCGCGGTGAATGGTGTCCACAGCCTGGAGTACAAGCACAGGTTT Gene GeneID:506977|LGALS8:NM_001045954:78_cdna Constitutive 1 NULL GeneID:506977 28 GENE LGALS8 MGC133892 lectin, galactoside-binding, soluble, 8 EMBV3_06960 AAGTCACCCACAGGTTCCTGGCAGAAGGAGGCAGAGATCCAGTCCAAGCCCATCTTTATA Gene GeneID:538209|PTGFRN:XM_002686122:157_cdna UTR3_Alt 2 NULL GeneID:538209 3 GENE PTGFRN NULL prostaglandin F2 receptor negative regulator EMBV3_39405 TTAGGGAACAAAGATCTGTATGGCTTCTGATGATTCTTTGGCTTCAGGCACCCCCAGGGC Gene BVV0101_021778 + 0 NULL GK000007.2:53513898-53578498 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19490 GAAGTCTGTCTTGTTTTTCTCTAATTGTGCTGTTTCAGAGGCTGGACAGTCAGCTGATGG Gene BVV0102_030879 + 0 NULL GK000001.2:72010053-72014193 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003937 TCONS_00001102 TCONS_00001098 TCONS_00001100 TCONS_00001105 TCONS_00003939 TCONS_00001099 TCONS_00003940 TCONS_00001101 2 XLOC_000941 XLOC_000257 Coding TCONS_00001100 XLOC_000257 Coding Coding SENP5 1:71965741-72014279 j TSS534 6985 1 TCONS_00001100_3 708 0.0458124552612742 9 0.856274594639141 0.000425720145663913 0.000560387058379614 7.8969014434806e-08 0.000500965413831614 0.000540708882972391 2.70631844887231e-09 0.000428202387957712 0.000605482253485576 0.00105196728859832 0.000253919069179902 2.30623009435875e-53 1.7554894236477e-08 9.03133511518566e-05 8.4999464846994e-14 3.28130681048245e-06 0.000539648984863035 3.67118178376128e-10 4.76386864459973e-09 1.00281778386622e-08 2.1589189019348e-10 2.67981172430101e-06 0.00064678515691557 2.51298561056593e-05 4.25335321054475e-05 7.8569320367693e-06 0.000758646935707244 1.59946535291285e-07 6.44375702089757e-09 6.73266397154212e-21 0.000548376579026241 XM_003581707.2 SENP5 PREDICTED: Bos taurus SUMO1/sentrin specific peptidase 5 (SENP5), 0.0 7414 100.00 0.58840372226199 XM_005269311.1 SENP5 PREDICTED: Homo sapiens SUMO1/sentrin specific peptidase 5 (SENP5), 0.0 4107 86.20 0.499928418038654 TCONS_00001100_3 sp|Q96HI0|SENP5_HUMAN SENP5_HUMAN Sentrin-specific protease 5; 0.0 1279 82.91 0.998587570621469 1 coding 1 1 1 1 -0.531245980153226 0.0596485304662842 -0.0473913768450798 0.347013394606314 CTGAAGGAGGTGACGGTGTAAGTGAGCGCCGGAGTCGCGGCAGCGGATCCGGAGGAAGCTCGGCGGCGGTGGCTGCTGTAAGCAGGCCGAATTCCTGCTGGCTGACGAGGCTTCCTCTAAAGCTGGCGAAGGCGGGGCCGCAGTCCGAGCTGCCGCAGTATCTGGACCCACGACGGGGCAGGTGCCGGCAGCAAGGGACGTAGCTGCATACAGATCTCATTATGCATCAGAAAAATGAAAAAACAGAGGAAAATTCTATGGAGGAAAGGAATCCACTTAGCCTTTTCTGAGAAATGGAATACTGGGTTTGGCGGCTTTAAGAAGTTCTACTTTCACCAACACTTGTGCATTCTGAAAGCCAAGCTGGGAAGGCCAGTTACTTGGAGCAGACATTTGAGGCAATTCCAGTGCAGAAAGAAGGGCCTTCAAATCCAGAAAACGTGGATCCAAGATGAACCACTTTTTGCTAAGACAAAAGGCAATGTGGCTATCCAGAATCTTTGTACTTCCGCCTCTAAAGTGAAAAGAAAGGACACCAAGCACTTCATTTCCTCCTCAAGGACCTTCCTGAAACTCCAGGCAGAGAAGTTGCTGTCATCAGCAAAGAACTCTGATCATGAATATTCTGGAGAGAAAAGTCTCTTGAAGGCAGCTGCTGACTTACCAGTGAATAGTGTTTTAGGTCAGGCCAATGGTCACAGACCTAGGACGGAGCCACAAGCTTCTGATTTTCCTATGAAGTTCAATGGGGAGAGCCAGAATCCAGGTGAGAGTGACAGAATCGTGGTCACCTTAAGCAACCATAAGAGAAAGCGCTTTTGTTATGGCTGCTACCCAGGGCTGGAGCACCACAGGAACGGGGGACCCTTGATTCCAAAAAAATTTCAACTTAACCAACACAGAAGAATAAAAGTATCTCCTCATATGATGTATGAGAAATTACCCATGATTAGATTTCGGTACAGGATTCTCAGATCCCAGCACTTCAGAACAAAAAGCAAAGTTTGCAAGCTAAAAAAAGCCCGGCAAAGCTGGGTGCAGGTCACCGGGGACCATCAAGAGACCCTTGGGGAGAACGGCGAGGGTGGCAGTTGCAGCCCATTCCCTTCCCCGGAGCCTAAAGACCCTTCCTGTCAGCATCCACCACACTTTCCAGATATGGACAGCGATGCTGTGGTGAAGGGAAAGAACTCTCATGTGCCTGAGGGCCACACTAAAGGAAGCCCTCTCTTGGACAAGGAGCTTAGTTTGGATGGAGCATTCCCTGACCAACAGAATGGCAGTGCCACGTACACCTGGGACCAGTCACCCTGTTCCTCTCCTAAATGGGAGTATACAGAGCTGATTCACGACATCCCCTTACCAGAACATCATTCTAGTAACATGTTCATCTTGGAAACTGAGAGAGAAGTTACGGCTCTGGGTCAGGAAAATCGGACAAGTACTGTCAGTGATGACCAAGTAAAACTGTCAGTGTCTGGGGCGGATCAGTCTGTGAGGAGTGTAGATGGGCCTGTGTCCGAAGAGACTGTTCAGAATGAGAGCTCGTGCCAGATGGATGAGGATGGCTCTTTCAAGCAGAATATTCTTAGTTCCAAGTTGCTGGACCACCCTTACTGTAAAAGTCCACTGGAGGCTCCTCTGATGTGCAGTGGACTCAAACTAGAAAATCAAGTGGGAGGTGGGAAGAACAGTCAGAAAACCTCTCCAGTGGATGATGAACAGCTGTCAGTCTGCCTTTCTGGATTCCTAGATGAGGTTATGAAGAAGTATGGCAGTTTGGTCCCACTCAGTGAAAAAGATGTCCTTGGAAGATTAAAAGATGTCTTTAATGAAGACTTTTCTAATAGAAAACCATTTATCAATAGGGAAATAACAAACTATCGGGCCAGACATCAAAAATGCAACTTCCGCATCTTCTACAATAAGCACATGCTGGATATGGATGATCTAGCAACCCTGGATGGTCAGAATTGGCTGAATGACCAGGTCATAAATATGTATGGTGAGCTGATAATGGATGCAGTCCCAGACAAAGTTCACTTCTTCAACAGCTTTTTTCATAGACAGCTGGTTACCAAAGGATATAATGGAGTAAAAAGATGGACTAAAAAGAATATAAGAAAGTATTTGCTGACTGAAGCCAGAGAAAAAAATAGACCTGAATTTCTTCAGGGTTGGCAGACTGCTGTTACAAAGTGTATTCCACAACAGAAAAACGATAGTGACTGTGGAGTATTTGTGCTCCAGTACTGCAAGTGCCTCGCCTTAGAGCAGCCTTTCCAGTTTTCCCAAGAAGACATGCCCCGAGTGCGGAAGAGGATTTACAAGGAGCTGTGTGAGTGCCGGCTCATGGACTGAATCAGCAGGGACTCTGGGAAGTCTGACCAAGTTGGAGCAGGTGGTTTGTTACTTGAATCTCCACTTATTTGAATTTTTACAGGTATTTCCGATCAGTGGTGTTGGGCCACTATTGTTACCTCAAGTTTATTTTCTGCCCTTAACTCATTTCTCTAGTGACCATGTACTATTTTTTTAATGTTCAGTTTGGTTTCATTTTTAATTTTATGGATTCTGTGTGTGTCCCCCCCCATATTTAATATTTATTATCCAAACGCATGCATATAGACAGAGCATGCAGTGCAGAGTATTAAAAAAAAAAAAAGCCTAGTAGATTTGGTGCAGCTTTTGAAACTTAGTTAGACGTGAACTGAATACAGGTTTAAATTTTAATTCCAGAACCTAAAAATGCAGGATGTTTTTGATAGAACATAACTCTGAGAGTAGTAGATGTTCCCTGGGGCATAAAGGGTAGCTAGGAGGGGTTTTGACAGTCAGTCCTCTATTTTTACCAGCAGCACCTTTCACTGACTTCTCTCTTCAGTGAGTCCCATTCCTTTTAAAGGATGAAAAGGAAGTGGCCATAAACTGACTGGTATGTTCTGTTTATGGTGGCACACTTGTAAGCACAGTGCCTGCCTTGTGAAGAGTTAAGATATGAGACAACGAAAGTGACCTTGAGGGTCCAATTATCTTCACAAATGAGATTTCAGCCTTGGCTTTAAGATTTATAATAAATGCTTTAATCTTATAAAAAGCTTTTGCTGGAACATTGAACTCCTTGGATTCTTCTGGTTTTGACCCATTAAAAAATCAGTATCTGTCAAACTAGTGGTCAAACAAATGAGAATCCAGCCCAAGAGTAATTTACAAGTTGTCACTTCCCCTGTATTGTTTCCCACTTGGAAGAAATTAAGATCTGCCAAATACCTATTTCAAGGGTATTTAAAATCTAAACATTCAAAACCAAAGACTAATTTTAGGTCTTTTGGACGTGGGTGGGGAAGAGAGAACAGAAAAGGTAATAAGGGAGACTTGATACTGAGGGGGTTACAGCAAAAGTTATGAGTGTTTCCCCTCATTTCTCTAATGATCTCAGCAACATGCAGGGCTTATCTGCCTCTGCTTGACCATCCCTGAGACTCCAGCACAGGAGTCCTTTTTTTTTTTGCTTCCATGAACCTCCTCTTCTGGGGGAAAGCAGAAGTGGCCCTGTCCTTAGCCTTTGCTGCATTAGGATTAAAGCAGTGGATCTTGCATCTTTAACAGAGTTTTGTGATAACTGGAAAGGAAAGGAGGAACAAGCAAATGGCAAAGGTACTTGGGTTAATGCCTCGTTAGGTGTGCGGGTAGGGCTGACTGCCAGCAGTTGAGGTGGAGTCAGAACATGTTTACGTGCAGGGTCCCTACCCCAGACATTCCAAGCACCAACACCAGTGTTTACATTATCAACAGGCCAGCACTTTCCTACTCCCTCAGACTCAAAACTCCTTAGTATAAAACCAGGTCAGTATTTCTCCTTGTGCTTCACATCATTAGGAAGACTGAGATTAGAGGCACGTTGTGCTGCTACAGGTAGGGCTGCATCCACATTGGAAAGGTGACAAAATGGGTTGGGTGTTTTCTTGAGGTTTTCAGGCATAATTATGCAAACGAGATTTTTCCAATCTGTATCCCAGACGTTTGCCTTTTTTTTTTTTTGGTAATTAGTAAGTAGGCTGTTAAAAATGTCTTACACTTTAGAGCGCCATAGTTCATATTTCATTGACAGAACCAGGCATGCAAGAGAGTTGTGTTCTGGCAAAAAATCTTCATGCCCCAAGCTTGAGTTGTCATTTCTTTCAGTCTAGAAATGGTCATTCTCTTAGCAGTGAGGCAGAGAGAACCTACAGTGAAGTGTCCCAAGTCACGGGTCTGTTTCATGTCCAGCTTAATAGAGCACCTTGAGCTACACTGTCCAGCATGCTTTAGCTTAAATGTCAGATATTTTAAGTCTGGTTAAATGTTTCTGTTATTCATAAGAAGCTTGTTTCAGTACACACAGTTGCTTCCCTCCTGCCTTTCCTACCCGTCTTGTGATTAGGTATAAACTTCTATTTAGCCCAAGTCCTCCATTAGGATGGCCTTTTTCCCTGATGTTTGCAGTAATGGTTTCCTTGCAACAGAAGTTTCTGAAATATAGTCTGGGCTGTTGGTAGAAGAGACAGGCATTGTTTTGTTTTACTCTCATTAGCTTGGCACTGAATTGTCTAGGTGCCCACAAGGTGGGCAGACCTTATGCTTTGGGGGTTGAGGGCAGGCCTTACACAAACTAAAAGCTGCTTATGATGTGCCTTCAACAAGCTGCTCAGTCCTCTCCATCAGCAAACTTACCAGTCTGTAGTTGCTTTTATCCTTTTGTAAAATCTATAGCAATGAATGTAGATTTAGTTCAACTTTTAGTTCTCTCAAACTAAATGGCTCAGACGGTAAAGCGTCTGTCTGCAATGCAGGAGACCCGGGTTTGATCCCTGGGTTAGGAAGATCCCCTGGAGAAGGAAACGTCAGCCCACTCCAGTACTCTTGCCCGGAAAATCCCATGGCCGGAGAAGCCTGGTCGGCTACTGTCCATGGGGTCGCAGAGTCGGACACAACTGAGCGTCTTCACTTTCACTTTTAGTTCTCTCAATCATAGAGAACCAATCTTCTCTTAAGAAAGGGAGAAGCAGCAGCTGCTTGCTGCCAGCAGTCCCCAAATCTTTTTTGGGGCTTTGCATTTTATTTTCTACATATCATTGAATATAATTAACACTGGTCACCTTGAATTCAGAGTTGGAACAAAGGAACAGACCTGAGACATCGCCAGCAGTAGCCTAAGTAGAGCTGCCCCCTTTCTCTGCAGTTGTGGTTTACTACTTCCTGGGTTAGAAGGAATAACTGCGAGCTCTGCATGGATCAGACCCTTCAGGCAAGAACCAGTGTGTTAATAGTGTGAATTAGATATACTGACTACCTGCTCTGCTTAATTGTTATGAAACTGAACTAATAAGCAGTTATAAAGCACATACTTTGTTATGTGCTAGGCTCTGCCTCCTGGCCTGTAGATAATTTAAGAAGACCTAGGGAATACCATCAGACATGCTAATTGTATTTGGGTGTTAACAAAAGCAGATCTAGACAAGCTGTCCACTTAAATGGTACCTTTTGGTCAGAAAAAATTTATTTAAAGATTGTGATCATGTAAAATTACTCAAACCTTCTAGCAAACATATTTTTTGAAAAATAAACTAAATGCCTTTATAAATGTGTGTTCTCTTGTGTTGGATAACATGTACTGTTTGGTGAGTAGTAATTTTTCCCAGTGGCATTCCAGTCATGACAAGGCTTATCTGCATAGGCTCTAAGCGGCTCACTGTCCAGTAGCAGCACTTTCTACAGTAATGGGAATATTCTGTATTTGCATCCACCACAAGACAGCCATTACCACAGGTAGGTATTGAGCATCTGAAATGGTAATGTGACTGAGGAACAGTTTTAATTAGCTGCATGTAGCGAGACACTACCATATTAGTAACTCTCAAATCTAAATGGACAGGCAAATTCTGCACACTATTCAGATTCTTCCCCAAAATGTATTAATATTCCAGGGTAAGAGTGTTTCAGTGTCTCTTGGTGAGGAAAAACACAGTAAGTTGGTCCAATTTTATTGAAATCTGTTACAGAAGACAATTCAAATATGAAATACTGTCTGTGGTTTTAAGGCCTATAGAAATCTGAATCATGTTTTACTGCAAAATAATACAAAATACATTCATTCAAACTACTGTAAAAAAGTGTATGTCCTCATTAAATTACTTGCACATGTTTTCCTAAGTACTTACAACTAATTTAGAGGTATCCAAATAGCCAACTTAAATTTGAGAAAACACACTTGCTGTAACATGAAAGCTGTTCACATTGCTGTAACATGAAAGCTGTTCACATTGAGATACTCCAGCCCCAACTTCACAAACTCCTGGAAATTAGGAGATACTTTGTTGCTAGATGAAAAAAAATCTCACTTAGGTCAGGGAGAATTGTACTAGACTAGCAGTTTAAAATGAGCAAGAATTCTTGTAACATTAGAGAAATCATCTCTTGCCTTACAAATGCAAAATAAATCCTCTAGACTCCCTTCTGGAAGTTGTAGAGACCATCAGCTGACTGTCCAGCCTCTGAAACAGCACAATTAGAGAAAAACAAGACAGACTTCAATATTAGAACTGGCCAAAACATTTCCCGAGGGAAGCATTTCTGATTTTGTTAAGCCATTCTCTCAACCACCACAAAACACTCCATTCCCAAGATCAGTCTGAAAATGAAAAAAACAGATCTGAAGGCACTCACACCTCACATTTTGAAAAATGTGTTTAGTAAATAAATACTCTTCAATACCTGTCCCTTATTTCCTGATATACAAAGCATGTAAAGCAGGTGGTGTTCCCTGGGACTGTCCAAAGCTTGCTTTTATACCAACTCTTTAGGAATTTCCATTAAGTTGTGCCTTTACAGATTAAAAATCAACACAGAAAAAAAATTCAGTTATCAAGCATCTGTTCCCCTAATTTAGAGCAAAGCTACATAACATAGCAAAAGTCCACTTATTAAACTTTATCTTGTGAAAACT EMBV3_13240 ATGGATGGGCACCATGTTAAGGACATTTCGTGTCTGAATCGGGACCCAGCCCGAGTAGTA Gene GeneID:505489|TIMM50:NM_001035024:544_cdna Constitutive 1 NULL GeneID:505489 18 GENE TIMM50 MGC128406 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) EMBV3_14234 GGACAGGGGTCCCAAGTAAAGAAGAGTGAGACCAGAATACCAATAGGACAAGGGTCCCAA Gene GeneID:767870|TSBP:XM_002697341:290_cdna Constitutive 0 NULL GeneID:767870 23 GENE TSBP NULL testis specific basic protein EMBV3_42613 GAATGCGCTCATCCACAGTCATAGGCCAGACCTGTTTGATTGGAATAGTGTGGTTCGCCA Gene GeneID:100297621|LOC100297621:XM_002700200:121_cdna Constitutive 0 NULL GeneID:100297621 X GENE LOC100297621 NULL similar to dystrophin Dp427c EMBV3_36963 AGACTGTCCCGAGTGTCTTGGAAGCAGGACGGACGTGTGTTGCTTGTCCCCTCGAGTCAA Gene GeneID:516807|TMEM104:NM_001079596:410_cdna Constitutive 0 NULL GeneID:516807 19 GENE TMEM104 NULL transmembrane protein 104 EMBV3_35547 AGTGGAGTCAGGAGGGGATGGTTTAGGACCAGAACATTTCTCAGGAACCTCAGGAGCATG Gene BVT0102_150913 - 1 EMBV3_36053 GK000028.2:25791925-25854740 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28384 TGGCAATGCTCAGTCTTTTGGCCTGTACCTCCCGCCACTCAAGCTCTGATTAATACCCAA Gene BVV0102_209586 + 0 NULL GK000001.2:132014616-132063621 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005292 TCONS_00005293 1 XLOC_001231 NonCoding TCONS_00005293 XLOC_001231 NonCoding NonCoding A4GNT 1:132040501-132063810 x TSS2627 491 1 TCONS_00005293_2 87 0.492871690427699 3 0.979062982666896 0 0.000352632921822204 9.37579203810413e-05 0.000270603792103817 0.000628460006212613 0 0.000308806901234501 6.0231374678632e-05 0.000112486579954064 0 0 0 0 0 0 0 0 0 1.58544290678964e-93 1.16516687751449e-20 3.35238395124847e-11 0 0 0 0.000980711742006011 1.781407354651e-36 0.000141166001397547 0 0 0 XR_239050.1 LOC101905210 PREDICTED: Bos taurus uncharacterized LOC101905210 (LOC101905210), 3e-67 259 85.34 0.468431771894094 NM_016161.2 A4GNT Homo sapiens alpha-1,4-N-acetylglucosaminyltransferase (A4GNT), 5e-14 82.4 80.00 0.181262729124236 0 noncoding CTCCATTCTCTCCGAGGTTTCTAGGAACACGATGCTGTGCCCACGACCCAGGAGAGCTTCCAGCCCCTGATGGGACTTGTAGGAAGGGAATGCCTCGGAGTCCTGAATACATTTTCCAGGCAATGCTCAGTCTTTTGACCTGTACCTCCCGCCACTCAAGCTCTGATTAATACCCAACCTCTATTGCATGTCGTAGAATGGACAGAGAAAAGACTGATCTTATCAACCAATGTCTGGCTCTACGCTCTTTTTTTGGAGCACAGAGGCCCTCTGGATTCACTTTCCTGCCCGGGCTTCTAAGACACTCTCGAGAAAGCACTCTGCACTTCCCCCCATCGAGAGGGCGCCTGAGGTCTTCGTGAACAGAGCAAGCCCCGTGTCAGGGACTTTATTGGTTGTCTGCGTAAACCAAGGAATATCAGCCTCTTTCTCTTTCCTTTACTTTCTTACCGTCGACTCTGGACCACCAGGTTCTGAGCCATTAAAGGACC TCONS_00002242 r 5' 2889 TCONS_00002242 TCONS_00002243 r 5' 0 EMBV3_20664 ATGGCAGCTTGCCTATCCAAGGGCCGTGGTGTTATTTAGGAGGATTCGATGGTAACTTTC Variant GeneID:617609|POMT1:NM_001080330:217_cdna 344^450 1 EMBV3_35055 GeneID:617609 11 GENE POMT1 NULL protein-O-mannosyltransferase 1 EMBV3_13168 TGGAGAGCTTTCTGGAGCCCACTCGTCTGAGCAGTCTGTCATCTACCAGTCTTCACCTGA Gene GeneID:521387|TRAPPC10:XM_002685158:143_cdna Constitutive 0 NULL GeneID:521387 1 GENE TRAPPC10 TMEM1 trafficking protein particle complex 10 EMBV3_21181 TGCTGGGAGCAGGCGTGTTTACATTGTTCCTGGCTTTTGACACCCAGTTGCTGATGGGTA Gene GeneID:509790|FAIM2:NM_001075418:53_cdna Constitutive 0 NULL GeneID:509790 5 GENE FAIM2 NULL Fas apoptotic inhibitory molecule 2 EMBV3_30325 CTCAGATGGTAAGGAACCTGCCTACAGTGCAGAAGACCTGGGTTCAATTTCTGAGATGGG Gene BVT0102_286667 + 0 NULL GK000012.2:12782475-12964734 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038149 1 XLOC_021975 NonCoding TCONS_00038149 XLOC_021975 NonCoding NonCoding - 12:12962760-12964461 - TSS27650 1701 1 TCONS_00038149_3 102 0.336860670194004 1 0 7.99864468598462e-06 0 0.000136008223761068 0 5.80503484995173e-06 1.26174954215946e-05 5.48543821540398e-05 0.000191245715294579 2.31927105928984e-05 0 0 0 0 2.76543062374852e-06 0 0 0 0 0 3.80499588227565e-05 3.92628179429964e-05 5.4531703939156e-07 0 0 0 3.31356403757962e-05 0 0 0 0 XM_005224063.1 AQP4 PREDICTED: Bos taurus aquaporin 4 (AQP4), transcript variant X1, 2e-62 244 87.00 0.116990005878895 0 noncoding 0 0 0 0 -0.00394610453973812 0.977879004228716 -0.011244355098961 0.873404708307018 GTGATACCGTACATTTTTATCATTCGTAATTCTTATTGTCCCAAAATGTATCTCTCATTCTTTAATACCATCTACTGTTGCTGTTTTAGTCACTAAGTTGTGTCTGAATCTTTTGTGACCCCATGGACTGTGGCCCACCAAGCTCCTCCGTCCATGGGATTTCCCAGACAAAAATACTGGAGTGGGTTGCCATTTCTCTCTCCAGGGGATCTTCCCAACCCAGGGATCGAATCCGAGTCTCCTGCTTTGCAAGTGGATTCTTTACTGCTGAGTCACCAGGGAAGCCCCGATACCATCAATGGAGATAGGTGATTATCTTTTATTGCCTTTTCTTACAAAATTCCAAACTTTAGTGGTATTAGGCAGACACCGGCTGTATGTCTAAGTCCTTCAGCCTTCTCCAGACTTCACAGATCCCCGAGGCACCTCTTAAATTTTTGTTGATGGCATTCTCACATGCAGGGGTGTCTTTTATCTCTCAGCTTCATGCTTACCCTTCTGCACGTTTACCCTTCCTCTTTACTACAGTGAAAGTGAAAATGTTAGTTACTCAGTCGTGTCCGACTCTTTGCGATTCCCTGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTGCAGGCAAGAATACTGGAGTGGGTTGTCATGCCCTCCTCCAGGGGATCTTCCCATCTCAGAAATTGAACCCAGGTCTTCTGCACTGTAGGCAGGTTCCTTACCATCTGAGATACCAGGGAAGCCCTTGACACAGTAGTGAGAAGACTGCAAAATACATCTTGGAATTCCTCACCGGTTGGCATCCACTGGGATGCAGGAGATGGAAATCTGGGGGAGAGGAGAAGGGGAATGACTGCTGCTTGCGCTTGTAACAGCGGCAGCATCAGCGACCATGTTAGCAATGGCAGCAGCCAGGCCAGCGACAGCGGTAACAGCAGCAGTAATAAGGTGTCAGAAAGAACATAGAAGCGAGACTAGCGGGTGAGTACCAGGTCCTGGGGTGCTGTTTCGGCAGCAGTGGCCCAACAGAAGCCGCCTCTGTGGCCCAGTGTTCATGGGCTCTGGCTGAAATCATTTCTCCCTTTGACCGCCAGCTCTAGGTACAGTAGCAATTTAGTGCAATTGCCAATCTTTGGATTAGCTAGCCTTTCTTATTCTGCTCCCATGCAGGCCATTCCCAAACTTTTCTATTTCTTATCTTCAGCTCCCTCTCAGTGAAACGCCTAGATCTGTCTCTGTTTTCCCTACCTGGCAGGGAGTGATGCATGTTGGTATGAATCTGCGTGTGTGTGTAACTGTCAGCAGATGTGGTGAGGCCTAGAAGGCATTTCATCACTTCCTAGAAAAACATTCAAGGGAGACTCAACAGACAGTGTCAACTCTGCAGACAACTGATCTCTCTCTCTCAGTCGAGAATCACCTCTCTGACCTGAATCTGAGAGGTTTGGGGGTATTCACTGGCATTTATAGACTCTTGCTTGTATCATGTTTATTCCCCAGAAGGTCTGCACTTAAATTATTGTGGGAAAATGCAAACTGTTTTTGTTGAGCCTTTTCTCTTTTAAGCTACACAATTCATCACTTTTATCTCTCTATATTTTTCTTCCCTTTAGCCTCTGAAGAGTCTTGAATTCGTGGTTTTCTTTTTTGCTATTTCCTCTTCCATTTTCCCTTGGAACTCTTCATTTTTGCAGACAATCTG TCONS_00034548 TCONS_00034549 . 5' 274 TCONS_00034548 TCONS_00034549 . 5' 274 EMBV3_34030 AATGCAAAGTTGAAGAACTGTAACCTCCGAGGGGCAACTCTGGCAGGAACTGATTTGGAG Gene GeneID:613717|KCTD9:NM_001102269:10_cdna UTR3_Alt 4 NULL GeneID:613717 8 GENE KCTD9 MGC159927 potassium channel tetramerisation domain containing 9 EMBV3_34237 TTGGGATGACATCAACAACGTCGGACTCAGTGCGACAGGATGGCTGCGGACTGTGCTCAG Variant GeneID:528832|DHRS1:NM_001046294:176_cdna 558^690 2 EMBV3_10417 GeneID:528832 10 GENE DHRS1 MGC137104 dehydrogenase/reductase (SDR family) member 1 EMBV3_23009 CAAAAATCCGATCCCCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAGCCCAGTCA Gene GeneID:404181|RPS6KB1:NM_205816:12_cdna Constitutive 1 NULL GeneID:404181 19 GENE RPS6KB1 S6K1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 EMBV3_15374 TAGGGCTTTCCCAAGTCCAGGCAGTCACAGGAGTCATGGTTACAGTCAGAAGTCCACTCA Gene GeneID:100337145|LOC100337145:XM_002697031:466_cdna Constitutive 0 NULL GeneID:100337145 22 GENE LOC100337145 NULL hyaluronidase-1-like EMBV3_26465 CACTGCTAAATCATAAGTTTAGTCAACCGTGCCAAAGATACTTTAGACTTGAAAAAGCCC Gene GeneID:506958|PQLC3:NM_001101878:72_cdna Constitutive 2 NULL GeneID:506958 11 GENE PQLC3 MGC148919 PQ loop repeat containing 3 EMBV3_23653 AAGGCCTAAAACTACTCCCCAAAAAAGCAACCCAGCGGCTAAGAGTTCTGAAGAAGACTC Gene GeneID:619000|LOC619000:XM_002692112:6_cdna Constitutive 0 NULL GeneID:619000 13 GENE LOC619000 NULL similar to ankyrin repeat domain 26 EMBV3_27969 GACGCTGCAAACAAATAACACTGGCGTGTGCTCGTAGTGCCTCAGCCACACTGGGCCTGT Gene BVT0102_243554 + 0 NULL GK000003.2:12189936-12252103 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007753 TCONS_00218857 TCONS_00207278 TCONS_00249135 TCONS_00033807 TCONS_00071186 TCONS_00054573 TCONS_00221884 TCONS_00198912 TCONS_00160965 TCONS_00142123 TCONS_00218859 TCONS_00185941 TCONS_00209869 TCONS_00124926 TCONS_00115416 TCONS_00089952 17 XLOC_003313 XLOC_132176 XLOC_125796 XLOC_152078 XLOC_020040 XLOC_042958 XLOC_032382 XLOC_135195 XLOC_120565 XLOC_097858 XLOC_086548 XLOC_132178 XLOC_111994 XLOC_128380 XLOC_076469 XLOC_069586 XLOC_054733 Coding TCONS_00198912 XLOC_120565 NonCoding NonCoding - 5:44470619-44471081 - TSS148480 462 0.997835497835498 1 0 7.36239772539076e-06 0 0 0 1.33581752840345e-06 1.93563449299421e-06 1.05189517347815e-06 0 0 0 0 0 0 8.48484075270203e-07 1.32743750277131e-06 0 0 5.43091750018615e-05 0 0 0 0.00339847362610922 1.98572471094249e-05 0 0 1.52499276434916e-06 0 2.07904344713945e-06 0 0 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-23 111 80.47 0.272727272727273 0 noncoding TGGTCTCTTCAGTGTCTGGTTTCCGCCCTGACACAAAGCGGACGGTGGTGGACACTTTTTTCTTTCTTTCTTTTTTTTTTTTAGGCTCACTTGTTCAGTCGCGCTGTGGGGAGGGAGGGACGCTGCAAACAAATAACACTGGCGCGGGCTCGCAGTGCCTCAGCTACACTGGGCCTGCCTCCGCTCACGGCACGTGTAGCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGCTCCGCCGGGAACCATGCGTGGGCGGCCCTGGGCTGCTTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCTGGTAGTCCTCAGAGGTGCAGACTCAGTTGGGCCAGCGTTTTGTGCCCTGCCTGGGTCCGAGCAGCGCAGGTGATGAGGTGTTTGGTGAGCGCAATTGCTGTGTCTTATCACCTCTCCGCCGCTCAGTTATCTAGGTGTACAACTGGCGCACC TCONS_00191697 TCONS_00191695 . 3' 21636 TCONS_00191697 TCONS_00191695 . 3' 22097 EMBV3_22671 CTGTACTTCAGGATTATGTTTACAATTGATCCAGGTGTTTGTTTCTAACTTCTGTAATAC Gene GeneID:541048|GLCCI1:XM_002686688:106_cdna Constitutive 2 NULL GeneID:541048 4 GENE GLCCI1 NULL glucocorticoid induced transcript 1 EMBV3_18455 AGAGCAGCACACACTAACCTATGCCTCTGTGTCCTCTTTAATGCCCAAAACTGTGCCTAG Gene BVT0102_099799 + 0 NULL GK000030.2:113949566-114055741 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245507 TCONS_00245509 TCONS_00245510 1 XLOC_150748 Coding TCONS_00245507 XLOC_150748 Coding Coding TMEM47 X:113923714-113952697 j TSS184282 3602 1 TCONS_00245507_2 64 3 0.875819474156373 9.36756483179592e-08 0.000146403060657399 1.17784343554517e-07 8.51249219425786e-07 0.000187044888251446 8.60621204613333e-05 7.04100534316866e-05 2.39616613432045e-05 0.000120219333246233 5.37191499945341e-07 3.1405264222681e-05 2.82979916714357e-05 0.000122131111665546 4.40111051171433e-05 4.27001547778803e-05 0.00026125883471267 7.40100001922208e-11 7.08730463997536e-05 0.000192793822409112 0.000234182330394242 4.39866337364125e-05 0.000198560269431996 9.83616692129159e-05 5.05300490209097e-06 0.000120405870672591 0.000210604203265446 9.00528947255435e-05 2.38167474195497e-05 3.54297705580153e-06 0.000570504501736375 NM_001076262.1 TMEM47 Bos taurus transmembrane protein 47 (TMEM47), mRNA. 3e-172 610 100.00 0.0935591338145475 NM_031442.3 TMEM47 Homo sapiens transmembrane protein 47 (TMEM47), mRNA. 0.0 4103 85.47 0.960022209883398 TCONS_00245507_2 sp|Q1JPA3|TMM47_BOVIN TMM47_BOVIN Transmembrane protein 47; 8e-41 135 100.00 0.984375 0 noncoding 0 0 0 0 -0.0612534325432457 0.740102877486257 -8.62353721101383e-05 0.998820009620799 CCTGGGCCAGGTCTTCCGGGCACAGGAAAAGGTTAATGCCATTTACAGACTCAGATCCAACTTGGCATAATGTAAAGCCCAATGAATAAAGGTTTTAGACAACGCGCGAAGAACACAGCAGCCGATAAGCAAACTGGCAGATTGCTACTCTGGCTTTACTCTTGGGTGGTGCTGCCATCATTCTCATTGCATTCCTGGTGGGTTTGATTTCCATCTGCGTGGGATCTCGAAGGCGCTTCTATAGACCTGTTGCTGTCATGCTTTTTGCAGCAGTTGTTTTACAGGTTTGCAGCCTGGTTCTTTACCCAATCAAGTTCATTGAAACTGTGAGCTTGAAAATTTACCATGAGTTCAACTGGGGTTATGGCCTGGCCTGGGGTGCAACTATATTTTCATTTGGGGGTGCCATTCTTTATTGCCTGAACCCTAAGAACTACGAAGACTATTACTAGAACCAATAGTCTCAAATTAAAAAAAAAAAAATCAACCATCCAACAAAAGGATTACGTCTGCATTTTTTCTAATTCATCATTTTCTAAAACACTTGCGGAGCATCAAACAATTTGCTCAGTTGATTTAATATCTTTTGCCTTTTGGCTGTCAACATCATAACCAGCTTTTACATCCATTTTAGGGACCTGCACAAATTAAGAGAGCTGATTAGATATAGGCAAATGCTGCAAACTTCCAATATATTCATGTCACTTTTCTTGACAAGCGAAGGGTCTATATGACAGCAACTATTGTGAGAAACTAGTTGGAATGAGAAATGCCTGAATCTCCTATTGCCTGCAGGGGAACAGCTGGCATAAACAACATTTAGAAGTTCTTTGCGCTGACAAGGATTCCACTGTTAGAGTCCTTATCGCCTGCTTATCCCATCTAGTGACTATATTGGTTATTTGCTTGAGTGAACTCTTGAAAAGTAAACTTCCCTTCAGCATCTAATGGGGGTTCTGAATGTAACTGGGTTAATGATACATATTCCACCTACGTTTTAATGGGAGGTTATGCTTTGGCAATGAGCATCTCTATGGGAAGGGAGTCAAGATTTGGAGACATGTGCATTTCATTATGTGGTTAGAAATTGTGCCTCAGCCATATCTAGAATGAGGAAAAATTGAGAATCTCTGTTTTCCCTGGGGCAACTAGAAAGAAATATGCATGATTGCTTTTGTCCTAAGTACCCTTTAAATCACTTACCAAACATTACAGCAAACAATTGTGCATATGTAACAAGCTTAAGTATTTTTATAGAAGGTGAGCCGTTAGTATAAATGGTAATAAGTTGTTCCCTAACCCTACACCTGCATTTGCCTATTGCACATAAAATTAATATTTGCTCTAGTGAAGTGATTTGAACACTAACCTTGTACACATTGTTAAGAGGCTTAGATCGGTATTCACACTTATTTACTGTACAAAAGTGCATATAAAAGCTTTTGCTCTATGTTCTCATTGGAAAGTGTTAAATAGAATTGTATAAGAAGAAAATCGAAATGGTGTTAATCTGAAAATTAATGATTCTTTTGTAAGCACTGTAGTTCAAAAGAGTGTAGCAATTAGGATGATCATTTTGTTTAAAAGTCATTAAAATAGAAGGCTTCTTTTTCCCCAAGTATTTTAAATGTCTTCATTAAAAAAGGAATAGTGATAGATTTATATAATTGTCAGTAGAGGAGTAGAATTCATCTGGTTTTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTAATGGGCTAACTGATTTGTGCACACAATTAAGATGGATTTGTGGTAAGGGAATCATTTATTGATTGTTCAAATGGAAGGAAATAATAGGGAATAAGTTTGCAGCGAATCTTACACTGCAAACTTGTGTTAATCCTGTTTAATATACAAATTTGGATAGTTTAATTATAAACATATTTTTATAGCAAATATACAGTTCTAATATAAAAGTTATAAATAATTATTTTTGTTAACAAGGACACTATTTGGCCCTCTTGCAGAAAGCATTGGAGAAACCATTTAAAAAATACCTATATTCTGTTGTATTGCAAAATCCATTAAGAACAGGACTACATCAATAGTGTTTAATAATTTGCTTTACCTCCCAAAGCAGAGTTCTGCTTTCAGCTTGTCTTAAGAACTGTTGCCAAAAACAACAGGAAAAAATCCACTATTTTATTATTCAAATGCTTAAAACCTCTTATCTTGTGACTTTTCTATGGAATCATGAAGTAAATTTGAAGAACCGGGCTTATTTTAACAATGAAAGACAAAACTAATTAAGTGCATTCTAAAGAGAAAACTTTATAAAAGTAAATAATCCTGTATAGAATCTATGAGTGAACATTTTCCAGAAAGATATTACTATTATAGAATCTTTTGAAGCAATTTTCTTGAGAAATAGTAAAATCTGGGCCAGACTGTCTTGTAGTTAATTGCATATTAGCAGAGCAGCATGGGAAATACGATATTTATTGGATAGGGATTTCAGCTACTAAACACTCTCTGTTGTGAGAGAATCTTTTTATTCCTGAATAATGGAAGAACAGTACTTTGGTGCTGACATCAATGAGGCACTTTTCTTAGTCCTAGTGGAGGATGCAGGGTGCTGTTAGACCAATATCACATCTCGAGTCTTGATCAAATTTTCATTCTCTGTCAATTTGAAAAAGCCGGAAATGACAGAATATGGTATAGCCAAGGCACACATATTTGCAGTTTAATGAAAAGTAGATTTCTTATATTACTTTTTTCCCCTTTCCAGTGAAGAGCCCTTTGCTATATTTCTACCATCACTAATAGTTGAAAGTGTTTCATTACTAACAAGTTCAGTACAACATGAAAGTTATCATGGCTCATTTGAAATACTGTTTTGTCTATCAGAATAAACACAAGTGAATTTTTCACCCACAATAATATTATGTCTTTGCAGCTTTAGGTTTGTTTATTGTTTTCTTACTAGCCAAACTATTAACTCTAATCCCATTGTTTGTCAGGGAGAGAGAGAGACACATGCACCTACATATAGCATAAAGTACTCAGCAGGGCTAGTTATTTGGATTTCTTGCACAGCAATTTAGCTTTTTGTAAGTTCAACATGTAAATTTTAAAGACAAATATAGAGAGACCTATGTGTTTGAAATATAAATGATATATATGGATTAGCATGTAACTGTATATTATTAAACATGCAATGAGCTGACTGGTAAGTGACGTCTAATTGTATGGCTAGCAATGTAATTTATTCAGACTGTATTTTTGTACAGAGCAGCACACACTAACCTATGCCTCTGTGTCCTCTTTAATGCCTAAAACTGTGCCTAGAAATTTCATCTGTCTTAAAAATAAAATATACTCCATGCTGTTTATGCTATTAGTTTCTCTACTGCTGTTCTATATTTATTATTTTAAAATATATGACATGTTTACTACTTAAATATGAATTCATGGTATTCTGGTTATTTTTTTAACAGTCCGTTGGGGAGATCCTGTTTATCAATCCAGTGGTTTTTGAGTTTGCAGTTTCACGATTAGTTCTTCATTTCATGATTTTTGTAGCTGACATGAAATTATCTATGTGGAAAAAATAAAAATAAAAGTGGCTTCCCTG EMBV3_26294 CCAGCTACTCACCGACATCTCCAAGCTATTCACCGACATCGCCAAGCTACTCTCCAACTT Gene GeneID:100294761|LOC100294761:XM_002707760:2_cdna Constitutive 0 NULL GeneID:100294761 28 GENE LOC100294761 NULL hypothetical LOC100294761 EMBV3_19380 CTGACATGGATTTTCTTACATACAATGGGAGGTTTTGGGGGTAGGATGAGGGAGAGCACC Gene BVT0102_040195 + 0 NULL GK000007.2:51182290-51193328 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217030 1 XLOC_131408 Coding TCONS_00217030 XLOC_131408 Coding Coding NME5 7:51153732-51183606 j TSS161727 1532 1 TCONS_00217030_3 209 6 0.948917082315134 0.000261626924883171 0.000174378638065501 9.54098194591917e-05 0.00017887464081098 0.000255680551149657 0.000130754258530701 0.000216679607214984 0.000150570931620419 0.000236909322117991 0.000128913500145829 0.000174826775282579 0 0.000260333113153271 0.000135101302688229 2.88223037241362e-05 0.00027583902472663 1.28313695238594e-05 1.91166731216858e-05 0.000323786226099474 0.000243360994567103 0.000152278892209608 0.000402034546170475 0 6.56577331363727e-05 0.000209168120962117 0.000291185949314989 8.58321789415322e-05 3.1348436932438e-05 6.97136039850802e-05 5.49422075851712e-05 XM_005209392.1 NME5 PREDICTED: Bos taurus non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase) (NME5), transcript variant X2, 0.0 1288 100.00 0.465404699738903 NM_003551.2 NME5 Homo sapiens NME/NM23 family member 5 (NME5), mRNA. 0.0 935 91.73 0.425587467362924 TCONS_00217030_3 sp|P56597|NDK5_HUMAN NDK5_HUMAN Nucleoside diphosphate kinase homolog 5; 3e-143 403 91.39 0.995215311004785 2 noncoding 0 0 0 0 -0.0205622816191277 0.905494566528166 -0.0106174196299794 0.832570281789209 GCTGCTATCTGCCTTGACCCTGTAGGTGCTGAGTATTTGGTTAGACAAAAGAAGAGACTTAAATAGTCTGGAATGAAAACTAACCAACCCTATGGATGATGGAAAACCTGCTTTGCTAACTTGGAGCTGCTTTCCTGAACTTTTCTGGATTTTGGACCTTTCATTGAGACTCTGACTTATTGAAGATCCCAATACTTGTTTACCATTTTTCTGTTGTCTTTTCTAATAAGAATTATACCTTAACTTACAACCAAAGAGTTAAAGGTGCTTGTGGACATGATATAAAGAAAACACAGAAAACTGAGATTTGGGGTTATGCCATAATATGTTGCCCACATCTTTGTTCCGTAAGGTTAATTTAGAGATAAATAGATTAAACCTCTTTTACTGCTCTTTAAATAAATGTTATTTCACAAGTCAAAAATTACCTTTTAATGATTAAGAAGCTGGGAGTAGAGGGGATAACATTGTCTGGTGAAATATGGAAGGTATCTGACATGGATTTTCTTACATACAATGGAAGGTTTTGGGGGTAGGATGAGGGAGAGCACCAATGATTTATCTCATCATTTGTAAAGTGGAGATTAATAAAAGTGTCCTTCGAATGACTAGGAGGATGAAATAAAATAAATTATGAGGAAAATGTTAGAAAACATCTATTGGTTTTAAGATTTGCAAGGGGATAAAAATCCCTGTGGCGGGTTCCCTTTCTTGGCTAAAAGGAGCTAGCCAAAGACTGTGAAGTGTTCTACTGGAATTGGCCCTCTGCAGCCACCGTCTCTAAGCTGGGTTTCTGGTCTCCTAGCAACAATCTGTGACACTAAAGGAGCCCAGGCTAAGTTGATACGTATGAAGAATCTTAAATTGTAGCCGAAAAGCCAGAATGGAGCTATCAATGCCCCCACCTCAGATCTACGTAGAAAAGACTCTGGCTATTATCAAACCAGATATTGTTGACAAAGAGGAGGAGATACAAGATATTATTCTCAGATCTGGATTCACCATTGTTCAGAGAAGAAAACTACATCTCAGCCCTGAGCACTGTAGTAACTTTTATGTGGAACAATATGGGAAAATGTTTTTCCCCAATTTAACAGCTTACATGAGTTCTGGACCACTTGTTGCCATGATATTAGCTAGATATAACGCCATCTCTTACTGGAAAGAACTCTTGGGACCAAGTAATAGCTTAGTAGCTAAGGAGACACACCCAGACAGTCTGAGGGCGATTTATGGCACAGATGAGCTAAGAAATGCACTTCATGGAAGTAATGATTTTGCTGCAGCAGAAAGAGAAATTCGATTCATGTTTCCTGCAGTGATTGTTGAGCCCATTCCAGTTGGACAAGCTGCTAAGGACTATTTAAATTTGTATGTAACGCCAACTCTGCTTAAAGGACTCACAGAACTTTGTAAGCAAAAACCAGCAGATCCTTTTATTTGGCTAGCTGATTGGCTGCTGAAAAATAATCCCAACAAACCTAAACTGTGTCATCATCCAGTTGCAGAATAATCTTATTAAAATAAAACCC EMBV3_39465 GCAGGGGAAGTTGGGGAATGGGGAGCATTCTTAGAGGGAGACTGTTCTGATGGGTCATTT Gene GeneID:505855|ERP27:NM_001038041:29_cdna Constitutive 0 NULL GeneID:505855 5 GENE ERP27 MGC134360 endoplasmic reticulum protein 27 EMBV3_11995 AGGGCCAGCCAGAAAAGAAGCAAACGGACAGCCAAGCAAACAGGACACCTCAGATCACCA Gene GeneID:529327|RELL2:NM_001046303:256_cdna Constitutive 0 NULL GeneID:529327 7 GENE RELL2 MGC137535 RELT-like 2 EMBV3_27014 TTATCAAGTTAGATTATGGCCTGTTTTATAGGCTACTTTTTCCTTCTGATGTGTAGGGGT Gene GeneID:509304|LOC509304:XM_002685035:92_cdna Constitutive 2 NULL GeneID:509304 1 GENE LOC509304 NULL hypothetical LOC509304 EMBV3_33391 AGTAAACAGGGTGCCCTGTGGAACCGGGTGCGGGTGTTCCCCTACATCTCTGCCATGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20013 CCGTGTGGGGATAACTTCTGCATCACCAAGGATCAGTTCACGTGTGGAGAGACAGTCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35667 TGCTGATGAGAGTGGATTGTTTCAGCAGAGAAAGAGTGGAGGAAACAGCAACCAGGAGTT Gene GeneID:783893|LOC783893:XR_083663:12_cdna Constitutive 0 NULL GeneID:783893 5 PSEUDO LOC783893 NULL similar to ankyrin repeat domain EMBV3_22977 ACAAGTATACAGCGTCGGTCCTCATAGCAGACCTCTTTTATATGGGATTTTAGCTCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21246 TATGCTGTTGGTTGTCATTGTGACTGTGCGCTGATTTGGGGAGAAATACAAGGGGGTGGG Gene BVT0102_139050 + 0 NULL GK000003.2:92944928-92963135 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179277 1 XLOC_109050 NonCoding TCONS_00179277 XLOC_109050 NonCoding NonCoding - 3:92949324-92950050 - TSS134036 726 1 TCONS_00179277_1 65 1 0 0 0 0 4.57528874223808e-05 0 0.000216791178417975 0.000297208573153885 0 2.17358502307736e-05 5.66734605303246e-06 1.57657293831044e-05 0 0 0 4.05470865598797e-05 0.00367434215327715 0.000503099499983374 0.00165890129884067 0.00060251592277396 0 4.18144842702742e-06 0.000470181153643071 0.000556002051537429 0.00214753460032504 0 0 0 0.000515980693671355 0.000113675193269824 0.000737038886646536 NR_036639.1 YIPF1 Homo sapiens Yip1 domain family, member 1 (YIPF1), transcript 7e-52 208 69.87 0.738292011019284 0 noncoding 0 0 0 0 -0.0607218194661155 0.628555335703106 -0.0284098929062199 0.692281586029593 CTTTAAAATGTCATCTCTGCTCTAGCAGTAAGTCTTCCCTGTAACCTGTAAATCAGGACTCAAAGCTCTAGGCTTGGAGAGCTGGTGGCTGCAGACTGCTTTGGTGTCGAAGTTATCTCTCTGAATCCTTCCTGTATTGGGGGAACCTTTGTCTTGAGAGTGACTCTTTTTGCTCTTCAGTTCTCTTCGATGGGTTTTGGAGTGTGGCTCTTTTGGACATGGCATCCGCTGTAGAAAAGCAGAACAACCAAAGCCATCAGGAAGACGGATGGAATGGCCCCAACACCCAACATCTGGGTGGTGCCACACTGAAGCCTGATCATCTCCTATTTAACAAACAAGAGTTAGATGTGGTTGAGACTCATGTCATTCAGCTCTTCGTTATGCTGTTGGTTGTCATTGTGACTGTGCGCTGATTTGGGGAGAAATACAAGGGGGTGGGAGGCTACTTTGGCGCCTGGCATTTGCTTCTCACAGTCACGTGGTGTGCTTCACATTAGGCACGCCCTTAATCCCTAAGATGGTTCCATCCTAACTGGGGTGCTTTTCTCTGGCTTGTGTACAGATTACCCAGATGAGCCGCTGCTCCCCTTGCCATCCTCAAGTGGCTAAACAGTGTGAACTTTGCTTTGGATTCATAGTGAGTCTGAAAATTTGTCTTTGGTGACCTGACTGTGGGCAGCTGAATCTAATGGTTGCAAAATAAATACAAAATGCAAATAATAA TCONS_00170701 TCONS_00170703 . 3' 3052 TCONS_00170701 TCONS_00170703 . 3' 3777 EMBV3_04087 GTCTGACCCTGTGCATTCTCTGCCTGATTCTTAGGTGTAAGGTGACGGCTGCCATTTGAA Gene BVT0102_239889 + 0 NULL GK000005.2:68876108-68883455 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192419 TCONS_00192422 TCONS_00192424 TCONS_00192420 TCONS_00192423 1 XLOC_117174 Coding TCONS_00192420 XLOC_117174 Coding Coding C5H12orf45 5:68866714-68878058 = TSS144001 4071 1 TCONS_00192420_1 192 0.197494473102432 4 0.641452878427224 1.82319816003641e-09 6.9903842419368e-05 5.5095763358396e-11 2.11840588632549e-10 1.47801305149727e-11 2.50510986541973e-11 1.29693279480858e-09 1.38753848065057e-11 7.14565642798899e-11 3.83631074367786e-07 0.000189103630445992 9.1132714178619e-05 5.27416688620329e-11 1.19694584748206e-09 1.03366399138744e-05 0.00232217666153148 1.9143043641942e-08 0.00295150345891361 7.61525705593261e-11 5.49679616679128e-11 3.84572889085824e-11 0.000696144932244479 0.00221086951777853 5.51643906346725e-07 2.98406321733775e-11 1.95619393909423e-11 4.67105900233641e-05 0.000215164053826908 0.000562196734857464 0.00170677650107397 NM_001038689.2 C5H12orf45 Bos taurus chromosome 5 open reading frame, human C12orf45 (C5H12orf45), mRNA. 0.0 3808 99.95 0.51903709162368 NM_152318.2 C12orf45 Homo sapiens chromosome 12 open reading frame 45 (C12orf45), mRNA. 0.0 639 83.86 0.146647015475313 TCONS_00192420_1 sp|Q2TBJ0|CL045_BOVIN CL045_BOVIN Uncharacterized protein C12orf45 homolog; 2e-137 387 100.00 0.994791666666667 1 coding 0 0 1 1 -0.0551586600940958 0.62365946908715 0.00532252462949044 0.907425110883936 TCCGGGCTTGGAGAGGCCGCTGTGAAGACCAGCGAGCAGCATGGAGGTTTCCGGCGAATCCCACTCCGGCCCAAGCTGTTCGTCGTCCTCGCGGGATGGCTCCGGGGTTTCGGTCTCCAAGGAGTTGCTGATGGCGGGGAGCGGCGGCCGCGGAGGTATATGGGACAGGTTGTTCATCAACTCCAAGCCTAATTCCAGAAAGAATTCTACTCTTCAAACAGTTCGGATAGAGAGGAGTCCCTTATTGGACCAAGTACGGACCTTTCTCCCACAGATGGCTCAGGCAAACGAAAAGCTAAGAAAAGAAATGGCAGCTGCACCACCTGGTCATTTCAATATTGAAAATACTGATGAGACTCTTGGACAAGTTATTCAAATGGACGTGGCCTTGTTTGAGATGAATCAGTCTCATTCGAAAGAAGAGGACAGTTCGGAAGAGAATTCACAAGACAGTTCAGAGGAAAGTTCAGAATCTGAGGATGAAGACGACAGCACCTCTTCGGAAGGTGAAGTCACCATAGATAATATTAAGCTTCCTCATTCAGAAGATGGAAAAGGCAAGATAGAGGTTCTGGACAGTCCTGCTAGTGAAAACAAAGAAAAACAGGAAAATAAGTGATCTGAGAAACAGGTGATAGATGCCTGCTAATTAAAAGGGAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTAGGCTAGTCCACGGGGTCGCAATGAGTCGGACATGACTGAGCGACTTCATTTCACTTGACTTCAATTCTATGGAAAAGAGTGTGACTCACTAGTTGTTTTGCATTTCAGATACCTATGGTGCTTTTTTGCAATATTGAATATACTTTGTTTTTTGGAGAAACAGAAGCTGGCTTTTAAAGAGCTGGAAGAGATAGCATTTGGGGATCCTCTAAGAGCACACTGTATTTGATTTCATGCTAAAGAGATTGCGTTTAGAAAGCTTAATTTTATGTATGGTAATGAGTGAGATTGTTGGCATCCTTCTTCATAGCATAGACTTCAGAAATCTCAAACTTATTTTAAGGTAAAAATACATATCACCTGTTTGTTTTTACTTTAAATTGTCCACTTGGATAAAACAACCTAGGTTGGTTTTTATTTTTTAAGTTTTTATAAAGTCAGACTTATTTATTACCATCAAAATGGGGTCAATGAGGTAGAAATCTTTTAAAGAAGTTTTTTACAAAGAAAATAATTACTTACATTTAGCCACCCTCAGACATATCTACTTTCATTAAAAAAAAAAAAAATTCCTTTCCAATTTGAGCGGGAAAACTGGTGTTCTGGTTTAATCACTGGTTTAAACTGGATTAAATTGGTTTAATCACTGTTGATGACTCTGTAGCCCCTTATTACATACTAATATGTAGAATTTTTATATTTCTCCCTTGCCATGGCTGTCTCATATAATACAACCAGGTGTGCTATACAGTTAAGTCATCTAAGTTCAGTTCTCTGAATTGTATGTAGAATTTACTTTTTTGGTTTTGTTTTTTCTTTTTCTCATAAAGCAGTGTTTTTGTTTGTTTCAACTATTGAAATTATTCCTCACAGTTGCCCAGTTTTGAAATCTGTTCATTGTAGAGAATAGGGACACCCCAAGAAAAATAGGGCACAGTACATAAAAAGATAGTAATCGGTTTTCCCTTTCAAAAGACAAAATGATCCTACTTTGGGGTCTCCTTTCTGCCTTATTCTTGACCTTATTAAACTTGTTTGGGTTCTTATTTGCCATGGAACTGGCTTTGCTCAGGATGTAAACTAGAGAATTTAGAGGAGTGTCTCCAAGTGCATTGAGCTGATGGGACTTTGTTCCCTAATGTTTTAGGGGTTTTTTTTTTAACTGTTTTTTTTCTTACTCCTCACCTTATCCTTGTGAATACTCTGAAGATTATTCTCAAGGTTCTTTCTGGTATTTCCCATTGGAAATTGGAACCCAGGCTGTGCCTTAAAAGTATGCAGAGTGAACAGATCTGGAAACCAGATTTCTCAGCTAGAAAAGATACTATGTTGTACCTGGTAGCACCAAACACAGCTGTGATGAATTATTGGTGTAAATATGTATTTAAATAAATTAACAAATATTTAAATAATGTCTTCTACCAGCTAATATTTATGCCACATTGTGGGAAGAATTGCATTTGTCTGGTTCACTCCTTAGCATGGTGCATGGTATACAGTAGGCACTGAATGATGTAGATAAATGAATCAACAGGTATATGGGGATGTACACGGCATTTTAAGCCATGGTATCCATGGGGATATGAAGGTGTAAGTTCACCAGAAATGCATACCTAAGTAGTAGACTGGTCAGTGAAAGAGACTAGTCAGTGTAGAATTACATACTAGTATGTAGAATTTTAATATTTCTCCCCTTCTTTGGCTATCTCATATAATACAACTAAGTGTTCTATACAGTTAAAGAAGTCACCTAAATTCAGTTCTCTGGACATTCTTATGACATTGGAGGAAAAAAAGAAATCTAATATGTGATAGGGTTGTCCTTTTCAGTTCAGTTCAGTCGCTCAGTCATGTCCGACTCCTTGCGACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAAATCCCGGAGTTCACCCAAACCCATGTCCATCGAGTCGGTGATGCCATCCAGCCATCTCATCCTCTTTCGTCACCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAATGAACACCCAGGAGTGTTTTCCTTTAGGATGGACTGGTTGGATCTCCTTGCATTCCAGGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGTGCTCAGTTTTCTTCACCGTCCAACTCTCACATCCATACATGACCACCGGAAAAACCATAGCCTTGACTAGACAGGACCTCTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTGTCTAGGTTGGTCATAACTTTCCTCCCAATAGTTAAGTGTAAATTGGATCCATTATTTAATACACAGTGTCAGGGATGGCTGTTTTTAAACAAAGTTAGAATCTAGGCTCATACCATGTACTAAAGTCAAGGGACAAATTGGGAAAAATATTTGCAATAAAAGGCAAAGAATGAGTGTTATTAGTATAAAATGGGCTTTTACAAATTAGTAAAAAAAAAAAAAAAAAAGTAATACTCTGAGTAGTGAGATGTGAGCAGATAATTCACAGGGAAAAAATGTTCAGTCCCATTTTTCAAAGAAATGCAAATAAAACCAAGGTTATACTTTTTTACCTGTTGAAGTGGCAGGTGAAACAACAGCTAGTACTTAACTAGTACTTAACCTTTTTGTGTGCCTGCCACTATTCTGAGTGTTTTGTGAGTTACCACCACTCTCACACATAGAAAAATTTATCGAGTTACACATTTAACATCTGTGTACTTTATGTATGTTATACCTTAATGAAAAAGCTGTTTTGTTTGTACGCAGCTTTCTCTACAGTCTCTTGGAAACTGAGTCACCGTCATGCTTTGGTTGGTCTGACCCTGTGCATTCTCTGCCTGATTCTTAGGTGTAAGGTGACGGCTGCCATTTGAACAGTCTTGTTCCTGCTAAGGCTGCTCAAATGTTCTCTTTAGCCTTGTGTGTTATCTTTTTATGGCTCTTTGACAGTCTTAAACTGGGTAATTAGGTTTAATGGTCTTGGAAGCAAAAATATTCTTAATGAATCTCCTCTATCCTCATAATACTTTGTGCATCAAATGTGGTATTTATTAAAAAAAAAAAAACCAAAAAACTGCCTTGCCAAGTAGCTTGTATTCCTGTGCCCGAGTCCACGGCTGTGGCAGAAAAGACAGAGATTGAGTCTTTTGCTTGTATTTCCCTCAGTGCCTGGCATGGTGCCTTTCACTCGGAATGTACAATAAATGTTCATGAAAAAAAAACTTTTTTTTTCCTCTTGACGCCAATAAAGTAATATATCTTAAACATCAG EMBV3_10136 GGCTCGGGGAATAGAAGATTCTCATGTTTTAAATTGGAGACTGGTTTTAATGTCTGAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11690 TGTACTGTCTGAGCCTCCAGGGAATAGAGGGAAAAGACGGTTAGCATCTGGCACTGAGTC Gene GeneID:616799|GINS4:NM_001082460:106_cdna UTR3_Alt 2 NULL GeneID:616799 27 GENE GINS4 MGC148462 GINS complex subunit 4 (Sld5 homolog) EMBV3_22871 TCAAATTTTCTTGGGCAGGTGGTTTGTAGAGGGTGGGTTTGCTGCTTCCATTGTCAAAGG Gene GeneID:522763|MGC148762:NM_001102069:23_cdna Constitutive 0 NULL GeneID:522763 21 GENE MGC148762 NULL hypothetical LOC522763 EMBV3_24777 ACATATGCATAGAGCTCTATTCTCCAGCTCCATTTTTGAGCTTCTAAAAAACACTGCTTC Gene GeneID:512581|F2RL2:NM_001038533:233_cdna Constitutive 1 NULL GeneID:512581 10 GENE F2RL2 NULL coagulation factor II (thrombin) receptor-like 2 EMBV3_27298 GAGGCTGAGGACAGGGGCTGACGTTCATTTTCTACAAGTGTGCGTCTGCCCCTGGGCACA Gene GeneID:100313356|MIR2338:NR_031108:13_cdna Constitutive 0 NULL GeneID:100313356 19 GENE MIR2338 bta-mir-2338 microRNA mir-2338 EMBV3_26066 TGCTAACATGGCCTGTGGTGGGAAGGATTGCTGTGGCCATTGTCACCCGAAGTTTCTGTA Gene GeneID:507282|LOC507282:XM_002693176:138_cdna Constitutive 0 NULL GeneID:507282 15 GENE LOC507282 NULL similar to olfactory receptor, family 52, subfamily B, member 2 EMBV3_12683 GATCGAGTCCCTCCGGAACTCACACTCCAGCCTGTACAGTAACCCAGGTGGGATGCCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19038 AGGCTGCGACCAGGGTTTGGCGTTATTGTCAGCCTCCGGGAGAGAGATTGGACAAACATT Gene BVV0102_252585 + 0 NULL GK000017.2:6707746-6786621 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074766 TCONS_00074765 TCONS_00074764 TCONS_00074767 1 XLOC_046426 Coding TCONS_00074767 XLOC_046426 Coding Coding LRBA 17:6785664-7101605 j TSS56568 6098 1 TCONS_00074767_4 1857 37 0.980815977717288 0.00221282957668302 4.31323941561115e-15 0.0010162708687692 0.00057661088736764 0.00177810463963603 0.000516928575430106 0.000554898092120997 8.1834941092042e-12 6.79258325845129e-05 1.59099362532636e-26 4.73859365805599e-17 1.16079768649117e-05 6.78929105258564e-05 1.1109108969342e-05 4.44714081190555e-05 1.32639699170808e-18 9.24855048717205e-105 2.04923999635666e-39 0.000513044251841778 2.38264968004642e-12 1.24101114263579e-07 2.45288423579029e-19 2.13547713000053e-16 2.84693140805391e-13 0.00104134399290688 1.77127047895368e-09 0.000777751438189888 1.06605315561377e-17 3.11583835352939e-12 6.7153399295191e-167 XM_002694326.2 LRBA PREDICTED: Bos taurus LPS-responsive vesicle trafficking, beach and anchor containing (LRBA), mRNA. 0.0 1.054e+04 99.46 0.969990160708429 XM_005263373.1 LRBA PREDICTED: Homo sapiens LPS-responsive vesicle trafficking, beach and anchor containing (LRBA), transcript variant X2, mRNA. 0.0 6747 89.39 0.835355854378485 TCONS_00074767_4 sp|P50851|LRBA_HUMAN LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein; 0.0 3102 83.11 0.996768982229402 2 coding 0 0 0 0 0.0392293971774141 0.711332275039791 0.00560487885419594 0.905452652573566 GCGGCCTCCGCAGCCGCGCCCGTAGCGCCGGCAGCGGCTGTTTTTGCAAAGGCTGAGCGCAGGGGTGGGGCGGGCCAGGAAGCCATGGAGTTCTGTGCAGCCTCGGACTCCCGGGGAGCGGACTAGGGAAACTTGGAGGCTGCGACCAGGGTTTGGCGTTATTGTCAGCCTCCGGGAGAGAGATTGGACAAACATTCTCCAGAATCAGCAGGGCGACGCCAAGGACTTTCCACACCAACTGCTCTTGGGGTTTCTCCACAGCTGGGAAGAGTGACCCTTTCCGTTTTGCGTGGCGTCCGTGTGCTTATTACTAGCGCGGCGACTGGGTCCCGGCGTGACTCTGAGTTGTCCTTTCCCTTGAACTCGCCATGGCCAGTGAAGACAATAATGTCCCATCCCCGCCACCAACAGGTGATGACGGAGGAGGTGGAGGGAAAGGAGAAGAAGCCCCTGCCGAAGGGGGTGCCTTGTCCCTGACACCAGGACTCCCCATCAGGGGTATCAGAATGAAATTTGCCGTGCTGACGGGCTTGGTTGAAGTTGGAGAAGTATCCAATAGGGATATTGTAGAAACTATCTTTAACCTGTTGGTAGGAGGGCAGTTTGATTTAGAAATGAATTTCATTATTCAAGAAGGTGAGAGTATCATCTGCATGGTGGACTTACTGGAAAAATGCGATGTTACTTGCCAAGCAGAAGTCTGGAGCATGTTTACAGCCATTCTGAAGAAAAGTATACGAAATCTTCAAATCTGCACTGAAGTAGGCCTTGTTGAAAAAGTGCTTGGGAAAATTGAAAAAGTTGACAGTATGATTGCAGATCTTTTAGTTGACATGTTGGGAGTGCTGGCTAGCTACAACTTGACAGTTCGAGAACTAAAGCTGTTCTTCAGTAAACTTCAAGGAGATAAAGGGCAATGGCCTCCACATGCCGGAAAGTTGCTGTCTGTTTTAAAGCACATGCCACAGAAGTATGGTCCTGATGCCTTTTTCAACTTTCCAGGAAAGAGCGCTGCAGCTATTGCATTACCTCCTGTAGCCAAATGGCCATACCAGAATGGCTTTACATTTCATACCTGGCTTAGAATGGATCCTGTAAATAACATCAATGTGGATAAAGATAAACCATATTTGTACTGTTTCAGAACCAGTAAAGGTCTTGGTTATTCTGCTCACTTTGTTGGGGGATGTTTAATTATAACATCAATAAAGTCAAAAGGAAAAGGCTTTCAACACTGTGTGAAATTTGATTTCAAGCCACAAAAGTGGTATATGGTAACTGTAGTGCATATTTATAACCGATGGAAGAACAGTGAGCTTCGATGTTATGTGAATGGTGAGCTTGCTTCCTATGGAGAGATAACATGGTTTGTCAACACGAGTGATACCTTTGACAAGTGTTTCCTGGGCTCATCAGAAACAGCAGATGCTAACAGAGTATTCTGTGGTCAGATGACTGCAGTTTACCTTTTCAGTGAAGCTCTTAATGCCGCTCAGATTTTTGCTATTTATCAGTTGGGCCTGGGATATAAGGGTACATTTAAATTCAAAGCAGAAAGTGACCTGTTCCTTGCTGAGCATCACAAGCTTTTATTGTATGATGGCAAACTCTCTAGTGCCATTGCGTTCACGTACAATCCACGCGCCACAGATGCCCAACTCTGTCTCGAATCATCCCCTAAGGACAACCCTTCGATTTTCGTTCATTCACCGCACGCACTCATGCTCCAGGACGTGAAGGCGGTTTTAACACATTCTATCCAAAGTGCCATGCATTCAGTTGGAGGAGTACAAGTACTGTTCCCACTTTTTGCACAGTTGGATTATAAGCAATATTTATCTGATGAGATTGACTCGACTATATGTTCAACTTTGCTGGCTTTTATCATGGAGTTGTTGAAGAACTCAATTGCTATGCAGGAGCAGATGCTTGCCTGCAAGGGCTTCTTGGTCATAGGATATAGTCTTGAAAAGTCTTCCAAATCCCATGTCAGCAGAGCAGTACTTGAACTTTGCCTTGTATTTTCAAAATACCTGAGTAACCTGCCGAACGGGATGCCCTTACTCAAGCAATTGTGTGATCACATTCTTCTTAACCCAGCTCTATGGATTCATACCCCAGCCAAGGTGCAGTTGACACTCTATACTTACCTGTCCACGGAATTCATTGGTACAGTCAACATATATAATGCCATTCGGAGAGTTGGCACAGTGCTTCTCATAATGCATACACTGAAGTACTACTACTGGGCAGTGAATCCTCAGGATCGGAGTGGGATTACCCCAAAAGGATTAGATGGACCGCGACCTAATCAAAAAGAAATGTTTTCTCTACGAGCATTCTTGTTGATGTTTATTAAGCAATTAGTAATGAAGGATAATGGAGTAAAGGAAGATGAACTACAGGCCATTCTTAATTATCTACTCACTATGCATGAGGATGACAATCTAATGGATGTGCTACAGCTGCTTGTTGCATTAATGTCAGAACATCCTAACTCTATGATACCTGCTTTTGACCAAAGGAATGGGTTACGTGTTATCTATAAACTTCTGGCATCAACAAGTGAAGGAATCAGAGTACAGGCTCTCAAGGCAATGGGCTATTTTTTAAAACACCTGGCCCCAAAAAGAAAAGCTGAAGTTATGCTTGGACATGGGTTGTTTTCATTGTTAGCTGAAAGACTCATGCTTCAGACAAATTTAATCACAATGACAACGTATAACGTCTTATTTGAGATTCTCATAGAACAGATATGCACTCAAGTGATACATAAACAACATCCAGATCCTGATTCTTCAGTAAAGATACAGAATCCTCAGATACTAAAAGTAATTGCAACGCTACTTCGAAATTCTGTGCAGTGCCCAGAGAGCATGGAAGTTCGCAGAGCATTTCTTTCTGACATGATTAAACTTTTTAATAACAGTAGAGAGAATAGAAGGAGTTTGCTACAGTGTTCTGTGTGGCAAGAGTGGATGCTTTCTCTCTGCTATTTTAATCCTAAGAATTCAGATGAACAAAAGATAACAGAAATGGTATATGCCATATTCCGAATCCTACTTTACCATGCAATCAAATATGAGTGGGGTGGCTGGCGTGTGTGGGTAGACACTTTATCAATCACACATTCAAAGGTCACTTTTGAAATACACAAAGAAAACCTTGCCAGTATATTAAGGGAACACCAGGGAAAAGTTGATGAAGAAACAGGGCATTGTTCTTCAAGTCCAGTTCAAGCAGTCTCTGGCATTAGCAGGGAGGTTAATGTTTCTGTAGGATCCCAACAATCAGATACAAAGGATTCTCCTGTGTCTTCTGATATCACTAGAAATAGTGATGAAAAGTCAAGTATTGGACAGACAAGTTCAGTAGAATCTGCATCCAACACTGAACTGCAAATTCCTGCTACATCTGATGAAGAAAGGACAACTGGGCCAGAAAATGAGGAGTTACTGGATGAAGTCCCTTTAGAAGAAACACTGATAAATGAAACAGTTAATGCAGATAATTTAGACGGGTCTTCTGACATAACAGAAGCTGCAACCATTTCCTCTGATTCTTTCACAACCGGCAAAGATACAGTGACTGTCAATGAGGTAACTGCTTCCATCAGTTCTCCTTCAGAAGAAGATGCTTCAGAGGTGCCAGAATTATTAGAAAAGTCTATAGTAGAGGAAGATGATGATGATTATGTAGAACTGAAGGTAGAATGTAGTCCTATTGAGGAAGCCAGTCTCCCCACAGAGCCCCAAGACAATAGTTTGTCTCCAGGTGCTTCTGAAGCCAGTGAGAGAGGGGATGTGTTTAGTAATGACCATAAATTAATATTTCAAGAGGAAGAGGCTGTAAGTAAGAAACAGACTGACAGTGAAACTCAAGATCCTGAAGATTCTGGAATCTTGCCTATGACAGCACCAGGGACTTCAGTTACCCCAGCAGATGTGACTGCTTCCCAAGCAGCTGTACATCCGGACATTGCTCATACGCTGGAGGAACGGGAGAAGACTAACTCCACTGGAGAAACCAAACTAAATAGTGATTCTCATGGGAATATCTTTGAGTCTCCTACTACTTCTGAGCATAAGATTGCTAAGTTGGATGTTTCCAGTGTTGCCACAGATACTGAGAGACTGGAATTGAAAGCCAATACAAACATGGAAGTGTCCCAGCCTCCTCAACCTGCGCTTGAGATGTCAAGGCAACAGGAGCAGCCTGGGCAAGGAACAGCCGACACAGTTAACGGACAAAGGAGGGATTCCAGGTCTATGTTCCGTATTCCTGAGTTCAGATGGTCTCAAATGCATCAACGTTTGCTCACTGACCTATTATTTTCAATAGAAACAGACATACAGATGTGGAGAAGCCATTCAACAAAGACAGTTATGGACTTCGTGAATAGCAGTGATAATGTCATCTTTGTACACAACACAATTCATCTCATCTCTCAAGTGATGGACAATATGGTCATGGCTTGTGGGGGTATACTGCCATTGCTTTCAGCTGCTACATCGGCTACACATGAGCTGGAGAATATTGAACCTACTCAAGGGCTTTCAATAGAAGCCTCAGTGACATTTTTGCAGAGATTAATTAGCCTTGTGGATGTACTTATATTTGCAAGTTCTCTTGGCTTCACTGAAATTGAAGCTGAAAAAAATATGTCATCTGGAGGAATTTTGCGTCAGAGTCTCCGACTAGTGTGTGCAGTGGCAGTAAGGAATTGCTTAGAGTGTCAGCAGCAGTCACAGCTGAGAAGTAAAGGCGAAACAGGAAAAAGCCAGAAAATGGCACACAGCCTGATTCCCACTGGGAAATCTGCTGCGAAGAGTCCAGTGGACCTTGTAACTGGTGGTATATCTCCAGTGAGAGATTTTGACAGGCTCTTACAAGACATGGATATCAATCGACTTCGGGCAGTTGTCTTCAGAGACATAGAGGATAGCAAACAAGCACAATTTTTAGCCTTGGCAGTTGTATACTTTATCTCTGTTCTTATGGTCTCGAAGTACAGAGACATTTTGGAACCCCAGAATGAAAGGCATAGCCAGTCTAGAGAAACTGGTAGTGAATGTGGAAATTTGTCACTCCCTGATTTACTGACTTCTGAAGAAAGAGTGCACAGTGCCTCGTTGATGGCATCGGGACCGGCACCGACGCGCGGAGGCACTCCAGGAGCAGCCACGTCTGCGCCGCTGCCTAGCCCAGGAGCTGTTTCTCCCCCAGTGCCTGAGTTCCGCCTTGGAGCAGGTGATGTGCTTTCAGATTCCTCCACAGATGCTGGAGTTAATGGGCTTGATGCTGCTGGTGAGTCCTCTACATCTTACCCAGAAAAAGAAGAAAAAAGTGTCATCGTTGCAACAAAAAAATCAGCAGTCTTACCTTCCACACTTACAGGTATACCTACCAATGCTGTTAGTGTGGTTTCTTCAGTAGATTCAGCTCAAGCCTCAGATGTGGGGGGAGAATCACCTGGTGGTAGATCATCTAATGCAAAATTACCTGCAGTTCCAACAGTTGGTTCAGTTCCACAAGACCAAGTTTCAAATATGAGCATTACAGAGAGGCTCGAACATGCTTTGGAAAAGGCAGCTCCTCTTCTGCGAGAGATATTTGTAGATTTTGCACCTTTTCTTTCTCGGACACTTTTGGGTAGCCATGGACAGGAACTGCTTATAGAAGGAACAAGTCTGGTTTGCATGAAGTCTAGTAGTTCAGTTGTGGAGTTGGTTATGCTACTGTGTTCTCAGGAGTGGCAGAATTCTATTCAGAAGAATGCAGGCCTTGCTTTTATTGAACTTGTCAATGAAGGAAGGTTGCTTAGCCAAACAATGAAGGATCATCTAGTAAGAGTAGCAAATGAAGCTGAATTCATCCTGAGCAGGCAGCGAGCAGAGGATATTCACAGACACGCGGAATTTGAGGTAACTAAAATTTTGTGAACTATGAGAAGACACAGAATGAAACATCTCTTTAATCTCTTCCTGGGCGGCTTCTGCCTCCTCACCTTTGGAGGAAGCCACTGTTAGTTTCTTATACATCTCGTCCAGGTTTCTTTATGCACATAAATAAAAATATGAATATATATTCTCATCCCC EMBV3_41342 GGATCTTCGACGACTAAAGCTTGAACTTGCCTCTCCTGCCCTGGGCAGGTGGATTCTTCA Gene BVT0101_072215 + 0 NULL GK000018.2:64552595-64569143 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40978 ATTGGGAGGATGTGCCCCACCAAGCGCTCAAGAGAACATAACCTGCAATAAAACAGCCCT Gene GeneID:520277|CALM3:NM_001046249:250_cdna UTR3_Alt 2 NULL GeneID:520277 18 GENE CALM3 CALM1 MGC128137 MGC140648 calmodulin 3 (phosphorylase kinase, delta) EMBV3_32962 GTGGCCTTCTCCTGCTCATTGCCTCACCTCCACTCACTCCTACACATACTTCTGCTGAAT Gene GeneID:618396|LOC618396:XM_002691541:15_cdna Constitutive 0 NULL GeneID:618396 11 GENE LOC618396 NULL similar to olfactory receptor 355 EMBV3_01624 CCTGCAGATGGAGTGATAGGAGAAGCAAAAGATTTGGGGTGAATTGAGGTGGAAGACTAG Gene GeneID:504548|UBD:XM_002697377:13_cdna Constitutive 0 NULL GeneID:504548 23 GENE UBD NULL ubiquitin D EMBV3_17358 CCTTGAATGAAGACTCTCGTTAGGAACAAGGGAATCGTGTTGATCTTCAAAGGTCTAGTC Gene GeneID:506133|TMEM194B:XM_002685234:167_cdna Constitutive 2 NULL GeneID:506133 2 GENE TMEM194B NULL transmembrane protein 194B EMBV3_16255 TTATGCCAACATCAGACACACCTCAGTCAACTGCCCACCTGCTCTGGTCATACTCTTCCT Gene BVV0102_195272 + 0 NULL GK000010.2:29164489-29404395 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020220 1 XLOC_010897 NonCoding TCONS_00020220 XLOC_010897 NonCoding NonCoding - 10:29341594-29342733 - TSS14110 1139 1 TCONS_00020220_3 88 1 0 3.58357706363441e-05 0.000185265224333011 0 0.000262465892750308 4.33466145429939e-06 3.14052433991212e-06 2.04801460123242e-05 8.30865148838409e-05 8.31270545370352e-05 0 0 0 2.51912441247397e-06 0 0 0 0 0 0.000163691137179279 3.15689673591458e-05 0 0 0 0 0 0.000105156217481987 6.17294209132534e-05 0 0 0 0 noncoding GGTAGCTTAAAGACAGAGCTAATAAAGAAGGGTTTATATGGATGTGGGATTGTAGGAAATGAACCAGAATGCTGGTTTCTGAAGACATTCCTGGGCCCACACAAGAGATGAGGGAGAATCAAGCAGGAGGATGCAGGTCAATTAGAAAATGATGGAGCCAGTTGTTTCTAAACTCAACATTCTTTAATCTGTAAGGTAGAGTCAAATGATGAAATGAATAATCCTTCCCAGGAAGCAGTGAAAACAGGTGATCACAAAAAAAGCAACAGAGGCAAATAAACACAGATACTCATAATAAAATCTATTTAATAATACAAATCCTTAAAAAATAATTACTAGGGTATTTCACTCTCCAGATAAATTCCTCTCACCCTTTCTTTTTCAACATTTTCCCCCTCAGATCGACCCTAAGGAACTCAGCAATATATTTGTATTTCCTCTAATTCAGTATTGGAAAGGAAACAAAGAACTGTTTTAAAAAATGCATTTCACTGACGTGTCCTCGTCCTGCTTGACAATCATATTCACCTAAAAAAAATTATGCCAACATCAGACACACCTCAGTCAACTGCCCACCTGCTCTGGTCTCACTCTTCCTACACTGGGCTAAAATGCATTCCAATATTTCCAATTTCACAGTTATCATCACCTCATTCTCTGGAACTCGATGGCTCACAATCCCTCAGGACAACCCTGGTCAGGACAATCAGTGCCTCGAGGTAGAAGCTACCACCACCCCGCCACCCCCAGTGCAGATGTGACCTTTCTAACACAAGTCAATTTCTGTGAGAAGGACCTGGCTTTCTTTTTTGTCCACCTGGGCCATTTCCCTGGAAAGGAGGGGATATTGGATGTCCAGCTATTCTGCTACAGCTCCTTAATAAGATCAGCTTCCCAAAGTCAAAGGAAAAGAGACCAAGAAGGCGGGAAGTGATGTTGGGAGATCCAGAGTAGGGGGACATTCTGCATTTTGCCATTTTAACCGTCAAACCTGATTCTACAGGACAGCCCAGCCCTGCTTTCCAGCCACATATGCCTGGTACTGGGTCTGCATTCTGGCACTGCCTCCATCACCACACACTGTCGTTCCAAGCCGCTGTGCTTGAAGGAGTCACTGGTGTCCTCCTCCTCCCCCCTGC TCONS_00013352 . 5' 61663 TCONS_00013352 . 5' 61663 EMBV3_26112 ATACTCATCTGATAAAGCTTATGGGAGAAAAGTTTTGACGTGGGACGGCGCGGTGTCGGC Gene GeneID:504581|USP36:XM_002696155:90_cdna Constitutive 0 NULL GeneID:504581 19 GENE USP36 NULL ubiquitin specific peptidase 36 EMBV3_07974 CCGGAACTCTCTTTGAGGATTTGGGGGTAAAGGGAGGCTGAAGCAGAAGAAAATAGCTTC Gene BVT0102_156075 - 0 NULL GK000011.2:49140112-49162709 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28793 TGACAATGGCCGGTTCGCTGGCCGGGAATTTACAAGAACTCTCCGCCCGATACCTGAGCT Gene GeneID:782056|VAX1:XM_002698517:124_cdna Constitutive 0 NULL GeneID:782056 26 GENE VAX1 NULL ventral anterior homeobox 1 EMBV3_37955 TCTAAGGCCTCACAGATGTTGGTCATTTCCCTGACACTTCACCCCCTGGCCTATAATCAC Gene GeneID:536256|SARM1:NM_001102518:142_cdna Constitutive 0 NULL GeneID:536256 19 GENE SARM1 MGC148473 sterile alpha and TIR motif containing 1 EMBV3_15519 ACTGAATCACCTTGCTGTACGCCTGGAAACTGCCACCACACTGTTAATCAGCCAAACTCC Gene BVT0101_022681 + 0 NULL GK000021.2:66780291-66817740 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121873 1 XLOC_073510 NonCoding TCONS_00121873 XLOC_073510 NonCoding NonCoding - 21:66803277-66811853 - TSS90683 1957 2 TCONS_00121873_2 78 0.111905978538579 5 0.772361516034985 0 0 0.000420851334685694 8.4866132155174e-06 0.00035571885230528 0 0 0 0 4.20489592749581e-06 0 0 0 0 0 0.000566830454515535 0 0 0 4.08301791088963e-07 0 0 7.5005037209647e-05 0.000162763321290162 0 0.000496819431449795 0 1.96324754679451e-05 2.72870005633685e-05 0 XR_229294.1 LOC101907133 PREDICTED: Bos taurus uncharacterized LOC101907133 (LOC101907133), 0.0 1772 99.30 0.509964230965764 0 noncoding 0 0 0 0 -0.219131078136069 0.255504986501042 -0.0727833353016847 0.273439217151268 TTTGTAAATATTTGTGATAAAGGCATAAGGAGTACTTGGGGCTTCCCAGGTGGCGCTAGTGGTAAAGAACCTGCCTGCCAGTGCAGGAGACATAAGAGAAGCCGGTTGGATCCCTGGGTCTGGAAGATCCCCTGGAGGAGGTCATGGCAACCCACCCCAGTATTCTTGCCTGGAGAATCCCGTGGACAGAGAAGTCTGGTGGGCTACAGTCCATGGGGTCGCAAAGAGTCAGACCCAAGTGAAGCGACTTAGCTTGCACTCACAGCACTCAGTTTTTCATGAGCCGTTCCTTATTCAGAGTTTCCACTTGAACTTAATAGCAGAAGTGGGTTTGGAGTTCCAGGCCTTGGAAGGCGCACCAGCTACAAAGGTTCCCTTACTACTTACGGCACGTGAAACGTCCCTGGTGGGTCCATTCACTTCCGACCCTGTACTTCTGCTGGGATCTTCCGGGGGCAACGCCACTCACGAGTGTAGATTTCTGCCATGACTTGCGGTCCCCGGCGTCGCCTGAGCATTCGATGCTGCTTGACACTTCTTTTCCCTGGTCCTCACTCTGGCACCCGCACCACCATTTTGCTCAGCGGATTCTCGAAATGACTTTTTTCAAAGCTCATAAGAAATCTGCCTGTGTGCTCTCCATTCCCTCGCCTCCCCACAGTGGCCCAGTGCCAGCGTCCCCTGCTTCAAGGCAGTTGGAGGGATCCAAGTTCGTTCGCTCAGACACCCAGGGTCCCCTCATGGCTGCTCCTGGCTGAGCCCGAGTTCCCGTCTCCACCTGCGCTCCCCCTCCTCCCATCCCGGGGACCTGCCCTGTGCCCTGGGCTCTCTTCCCTTGGCAACGTCTCTCCCTGTCTTTAGAAACAGGGCTCTCTCTTGACCCCATGTCCCCCAGGAGTCACTGCCCATCTCCTTGCAGTCCCAGCCAAGCCCTGAGAGCAGGTCTGCGCTGACCGTCTCCGCTCCATCTGTTGAGCCGCAGGCCCCGTCCCACCGTCTCACCAAAACCTTTGCCAACCAGCTGCGTGACCTGCTCCAGCCCTCCTTTCCCAAGGCTCTCCGGAGGCTTCCTAACCTGCAGGTGGAACCACATCATTCCAGTCGAAACTCAAAGTTTGGAGCCGCTCCTCCAGTAGGCATTTCAAACGCGCAGCCTTGTTTTCCACCCCTCCTGCCTCCCCCAGCTCCAGTGGTTCAGACCTTTGTTTTCAGGCTGGCCATTCTCTGCCCAGGAGACCCTTTCTCACCGCCTTTGACATTCCTCCTCTTCCAAAGCAGCTCAGGTGGCATCTCAAAGAAGCCTTCCCTGGAAGGGCATTTCGGTAGCATTCCGCCCAAATTGCTATCATCGTCTTCACGGTGAAAGTGACCTGTTAACCTTCCTGCTTGTCCACCAAGCTGCGCCTTTGAGGGCAGGGGCAGTTTCTCTTCTGCCTCCAGCCTCGGAGTGGACCAGGGCCAGCCCGATGCAGGACGCGCGGTCGGCCCCATCGGAGCAGAAACGCCCGGCGCTGCCCCTCCTGGTTTCGTCCTCCACCCCCACCGCCTGTGGAACGCAGAGTGGTTGCATGCCATGTACAACTGAATCACCTTGCTGTACGCCTGGAAACTGCCACCACACTGTTAATCAGCCAAACTCCAGGACGAAATAAAAAGTTTTCTAAAAAGTCCCAGCTCCTTAGCTGGGCTAAAAGGGAAATGTGGCATAATAGGGGAAAAAAAAAAAAGAAGTTTCCATGAGACAGACCCAGATTTTAATAGCGGTTCCACTACTTATCGGTTCAGTGATCTCGGTAAAAAGGCACAGAATTTACTGTCTTCGCCGTTTTCATGTGTGCGGCTCATTGGTGCCGAGGACGTCTGGGTAGCCACGCATCCCACCACCGCTGTCCTTCCCCCGGGCTCCTTTCATCTTGCCAAACCGAAGCTCTCTTCCTGCTGAACAGTAACCCCCGAC TCONS_00120038 r 5' 14133 TCONS_00120038 r 5' 5720 EMBV3_43413 CTTAGGACTTCGTGTCCAAGGCCGAGACCTAGCCTTCTCGCCAGCACTAAATACACTAAC Gene GeneID:613446|PLLP:NM_001099123:403_cdna Constitutive 1 NULL GeneID:613446 18 GENE PLLP MGC166233 plasma membrane proteolipid (plasmolipin) EMBV3_16525 CTTTGCTGTCTAGCATGATCTGCATGACCTATAATCTTTGAACCACTTTCGTACCTCATG Gene GeneID:541277|TSC22D2:NM_001144101:56_cdna UTR3_Alt 2 NULL GeneID:541277 1 GENE TSC22D2 NULL TSC22 domain family, member 2 EMBV3_02367 CTTCTAGCCTGCATTAGAAAGCTCTAGGCGTAGGTGATATGCCATTCCATGATGGCTTCC Gene GeneID:539563|MARK1:XM_002693962:157_cdna UTR3_Alt 2 NULL GeneID:539563 16 GENE MARK1 NULL MAP/microtubule affinity-regulating kinase 1 EMBV3_34284 AGCCGAGTGGTCAAATGCAGCACCAACCCCATCTTCAATGAGGACTTTTTCTTCGATGGG Gene GeneID:787419|C2CD4D:XM_002686036:221_cdna Constitutive 0 NULL GeneID:787419 3 GENE C2CD4D NULL C2 calcium-dependent domain containing 4D EMBV3_30294 AAGTCTCCTCCAGCCGACGTGCTGATAAACATCATAGCTGTCCTCAACAACCTCGTGGTG Gene GeneID:516247|PKP3:NM_001076858:290_cdna Constitutive 0 NULL GeneID:516247 29 GENE PKP3 MGC142697 plakophilin 3 EMBV3_00956 ATCATGAACCTTGCCTGGACATTTGCCACCTAAAAGATCAGTGTGGTGCTGCGTTCTGGC Gene GeneID:504811|CAMTA1:NM_001100294:28_cdna Constitutive 0 NULL GeneID:504811 16 GENE CAMTA1 NULL calmodulin binding transcription activator 1 EMBV3_08861 CCCTCAGCACCCAGCACGTAGATAATACAAGTGACATGACTGTAAACACCAGCGACCGCA Gene GeneID:616801|TRAF3IP2:NM_001035483:71_cdna Constitutive 0 NULL GeneID:616801 9 GENE TRAF3IP2 C6ORF4 MGC134034 TRAF3 interacting protein 2 EMBV3_18050 GGGGTCAATCCAAGAGGAAGACGTAACAATTGTAAATATCTATGCACCCAACGTAGAAGC Gene BVV0102_063397 + 0 NULL GK000014.2:39264600-39328603 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150015 1 XLOC_091796 Coding TCONS_00150015 XLOC_091796 Coding Coding - 26:11532247-11538792 - TSS112494 4178 1 TCONS_00150015_12 124 0.804451890856869 2 0.361858190709046 0.00219104243493564 0.00239427836847623 0.00133228330166534 0.00108337864064317 0.00191634899179236 0.000599557657688176 0.000422547098469683 0.000972850273330613 0.00268063347121649 0.00045951830552785 0.000209851295959926 0.000276757690138394 0.000146966585080107 0.00257225408342361 0.00223750057224574 2.52863210193486e-05 9.93435840833436e-07 0 0.000194377467486132 0.00121598844531343 0.000449104245415371 1.7761303169157e-07 1.97621878965974e-05 8.02520154466831e-06 0.000963712857351226 0.00152854017732444 0.00180612813561353 7.12686678386746e-05 4.76397700842662e-05 0.000115121990512847 NM_001191412.1 RPL21 Bos taurus ribosomal protein L21 (RPL21), mRNA. 0.0 951 91.78 0.159406414552417 NM_000982.3 RPL21 Homo sapiens ribosomal protein L21 (RPL21), mRNA. 0.0 677 88.13 0.128291048348492 TCONS_00150015_12 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 7e-37 136 52.46 0.975806451612903 0 noncoding CTGGTTTCCCTGGTAACTAATGAGCCCACCTGACATCAATTCCACTATAACTGGTAACTTCCCTCCCCTCTTCCCCTGGCGAAGACTGCCACCACATTCTGCCGCTTTCTGCAGCACACTATGAAGTGTCGCTCCAGGACCTTTCTTCAGATGTGCTCTGTGAAATACGTTGCAAGGTATATCTGTCTGCAACAGGACAGTCTGAACATTGCTTGCCATTCAGTGCTCACGAAAGGAAAGTATTAAGACTGAGGAGAGTCAAGATTATGTAATTTTTTCAAATTGAAGATTTGTGACAATCTTGAATCAACCAAGTTCATTGATACCATTTTTTCAAACACCATTTGCTCACCTTGTGTCTCTGTGTCTCATTTTGAGGTTAAGCCCTGAGCCTTTGGAGTGGGAGCACTGACTCCAAGACCCTGGACTACCAGAGAACTAACTCTAGGGAGTATCACATATTGAGAACTCACACAAAGGAAACCACTTGAATACAAGACCCGGCATCACCCAACCACCAGGAGCACCCTGTACAGGAAGCCTCATCTAAACAACAAACAAAACAAAAATACAAACCCAGCAGACAGGATTACCACCTCACTCAGCCTTGCCCATCAGAGGGAAAACAAACAAACAAACAAACAAACAAAAACAACACAAATCGCACCCTATATGAAGCTTACACAAACCACTGGACCAGCCTTAGGAGGGCAGAAACCAAAAGGAAGAAAGAATTCAACCTTCAAGGCTGGCAAAAAGAGACCTCAAACACAATAAGGTAAAAAAAAATAATGAAAAGGCAGAGAAATACTACACAAATGAAGGAACAAATTAAAAACACAGAAGATCAAATAAATGAAGAGGGAATAGGCAAACTACCTGAAAACTAATTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAAATGCAAGAATCAATTAACAAAGACCTAGAAGAATTAGAGAATAGACAGTGGGTGATGTGTTTTCAAATCTAGTGTTTCTTCTTCCTGAAAGATGTAAGATAGTTTGTTATTCAGTATGTTCCATTGGTTAATAAACTGCCAGATATTGCCAAAATAAAATTACTACAATTACTACAATTAAAAATACTCTAGAAGAGATCAATAGCAGAATATCTGAAGCTGAAGAGTGAATCAGTGAGCTGGAAGTTAAAATGATGGAAATAACTTCTGAAGAGCAGAATAAAGTATAAAGAATGGAAAGAACTGAGGATAGTCTCAGAGACCGATGGGACAATATCAAAGGCACCAACTTTCGAATTATATGGGTCCCAGAAGAAGAAGAGAGAAAGGAAGGGTATGAGAAAATTTTTGAAGAGATTATAGTTGAAAATTTCCCCAACATGGAAAAGGAAATAGTCAATCAAGTCCAAGAGGTGCAAAGAGTTCCATACAGGATAACCCAAGGAGAAACACACCAAGACACATATTAATCAAACTAACAAAGACTAAACACAAGGAAGGAATATTAAAAGCAGCAAGGGAGCCTGTCGGCTGGAACCACCATCTTCCAGTAATTTGCCAAAATGACCAACACAAAGGAAAAGAGGAGGGGCACCTGCTGCATGTTCTCTAGGCCTTTCAAAAACATGGAGTTGTTCCTTTGGCCACATCTATGCAAATCTACAAGAAGGGTGATATTGTAGATATCAAGGGCATGGGTACTGTTCAAAAAGGAATGCCCCACAAATGTTGCCATGGCAAAACTTGGAGAGTCTACATTGTCACCTAGCATGCTGCTGGCATCACTGTAAACAAACAAGTTAATGGCAAGATTCTTGCCAAGAGAATTAATGTGCCTATTGAACATATTAAGCACTCTAAGAGCCTAGATAGCTTCCTGAAACATGTGAAGGAAAATGATCAGAAAAAGAAGGAAGCCAAAGAGAAAGGGATTTGGGTTCAGCTGAAGCACCAGCCTGCTCCACCCAGAGAACACACTTCATGAGGACCAGTGGAAAGGAACCTGAACTGTTGGAGCCCATTCCCTATGAATGTAGGGCCTGTTGGGTGTAAGAATAAAGACCTGGACTGTACAAATGTTTCTCTTAATTGAGTAGAGATGTTGTGTCTAAATTCAGTGGGTGATGTGTTTTCAAATCTAGTGTTTCTTCTTCCTGAAAGATGTAAGATAGTTTGTTATTCAGTATGTTCCATTGGTTAATAAACTGCCAGATATTGCCAAAATAAAAAAAATAAATTGCCAAAAAAACCAGCAAGGGAAAAGCAACAAGTAATATACAGGGAAACCCCATGCATTTAATAGCTGATGTTTCAGCAGAAACTCTGCAGGCCAGAAGGGAATGGAAGGATATATTTAAAGTACTGAAAGGGAAAAATCTACAACCAAGATTACTGTACCCAGCAAGGATCTCATTCAAAATTGATGGAGAGAGAAAAAGCTTTTCAGACAAGCAAAAGTTAAGAGAATTCAGTGCCACCAAACCAGCTTTACAATAAATGTTAAAGGGACTTATATAGTCAAGAAATACAAGAGGAAAAAAACATCTACCAAATCAACCCCAAACAATTAAGAAAATGGCAATAGGAACATATATCAATAATTACTTTAAATGTAAGTGGATTAAATGCCCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAAACCCACTTCAGACCTAAAGACACATATAAACTGAAAGTGAGAGGATGGAAAAATGTATTTCATGCAAATGGGAAGCAAAAGCTGGAGTAGCAATCCTCATATCAGACAAAACAGACCTTAAAATAAAGATTGAAAGAGATAAGGAAGGACACTATGTAATGATCGAGGATCAATCCAAGAGGAAGACGTAACAATTGTAAATATCTATGCACCCAACGTAGGAGCACCTCAATACATGACAAACACTAACAGACATAAAAGGAGAAATTGACAGGAACACAATAATAGCAGGAGACTTTAACACCCCACTCACACCAATGGACAGATCATCATAACAGAAAATTAATAGGGAAACACAAGTCTTAAATGATACATTAGATGAGATGACTCTCATTGATATCTTCAGGACATTCCATCCAAATGCAGAAGAATACACCTTCTTCTCAAGTGCGCATGGAACATTCTCCAGGATAGACCACATCTTGGGTCACAAATCAAACCTCAGTAAATTTAAGAAAATTGAAATTGTATCAAGCATCTTCTCTGACCACAATGCCATGAGACTAGATATCAATTACAAGAAAAAAACTGTAAGAAACACAAACACATGGAGAGTAAACAATGTATTTCTAAACAACCAACAGCTTACTGAAGAAATCAAAAGTGAAATCAAAAATTTTCTAGAAACAAATGACAATGAAAACATGACAACTCAAAACCTATGGAATGCAGCAAAAGCAGTTCTAAAGGAGAGTTGATAGCAATACAATCCTACCTCAAGAAACAAGAAAAACATTGAATAGACCACCTAAATTTACACCTAAAACAACTGTAAAAAGAACAAAAAACCCCCAAAATTAGTAGATGGAAAGAAATCATAAAGATCTGAGCAGAAATAAATGAAAAAGAAACAAAACAATAGTAAAGACTAATAAAACTAAAAGCTGATTCTTTGAGAAGATAAACAAAATTGACAAACCTTTAGCCAGACTGATCAAGAAAAAAAGAAGAATCAAATCAACAAAATTAGAAATGAAAAAGGAGAGGTTACAACAGACAATGCAGAAATACAAAGGATTATAAAAGACTATTATGAACAACTATATGGCAATAAAATAGATAACCACAGATTCTTAGAAAAGTTCAATCTTTCAAGACTGAACCAGGAAGAAATAGAAAGTATAAACAACCCAATTACAAGCACTGAAATTGAACCTGTGTTCAAAAATCTCCCCAAAAACAAAACCCAAGGACCAGATGGCTTCACAGGAGAATTCTATTAAACATTTAGAGAGGGGCGAATGCCTATCCTTCTAAAACTCTTTCAAAAAACTGCAGAGGAAGGAAAACTTCCAAACTCATTCTATGAGGCCACCATCACCCTGATACCAAAATCAGACAAAGACAACACAAAAAAAGAAAACTACAGGCCTATCACTGACGAACTATCACTGATGAACATAGATGCAAAAATC TCONS_00149999 TCONS_00150000 TCONS_00150001 TCONS_00150002 TCONS_00150003 TCONS_00150004 TCONS_00150005 TCONS_00150006 TCONS_00150007 TCONS_00150008 TCONS_00150009 TCONS_00150010 TCONS_00150011 s 3' 64536 TCONS_00149999 TCONS_00150000 TCONS_00150001 TCONS_00150002 TCONS_00150003 TCONS_00150004 TCONS_00150005 TCONS_00150006 TCONS_00150007 TCONS_00150008 TCONS_00150009 TCONS_00150010 TCONS_00150011 s 3' 64536 EMBV3_17908 GTCTCTGCTTTTCTGCCCCTCCATAACATCTAATTACTACTAAGACTGTGCTCACGACAG Gene GeneID:537290|TWSG1:NM_001076089:161_cdna UTR3_Alt 2 NULL GeneID:537290 24 GENE TWSG1 MGC139157 twisted gastrulation homolog 1 (Drosophila) EMBV3_30407 CTGAGGGAATCGTGTCGAAGATGTGGAATAAGAGCTCGAGCTCAGCACATTGTACCCTGT Variant GeneID:507912|RPA2:NM_001045984:96_cdna 136^242 1 EMBV3_08662 GeneID:507912 2 GENE RPA2 MGC137236 replication protein A2, 32kDa EMBV3_32842 AGGGCTGTGTTCTGGACCTGATGGTGTCCTGGACGTCTTGTACCTGAATCACTGGTATAA Gene BVV0102_035538 + 1 EMBV3_13984 GK000021.2:66842555-66852434 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120041 TCONS_00120049 TCONS_00120042 TCONS_00120046 TCONS_00120045 TCONS_00120043 TCONS_00120047 TCONS_00120044 TCONS_00120038 TCONS_00120050 TCONS_00120048 1 XLOC_073039 Coding TCONS_00120038 XLOC_073039 Coding Coding YY1 21:66817572-66847749 j TSS89734 6510 1 TCONS_00120038_1 160 0.0153609831029186 5 0.784431336161188 6.04983318305954e-05 4.8426003284928e-05 4.31249440491749e-10 1.14353973908795e-07 1.0688647932889e-09 5.27991627442089e-09 8.01077646905743e-07 5.86682719981855e-12 3.47333129306018e-06 1.65688215028161e-09 0.00020363356178109 0.00022792254877077 1.48640620163702e-17 9.52046754072784e-05 0.000108730561934021 0.00241027393667823 0.00210241499808056 0.0033928170890006 1.06271175378946e-07 1.6385582159526e-09 7.36254616649239e-27 4.09371686364489e-05 0.00131661238957634 0.00163244705895601 4.09260263998411e-05 0.000153141443068672 0.000142272555524807 5.31275642713248e-08 1.33469781207157e-08 6.74190564010121e-07 NM_001098081.1 YY1 Bos taurus YY1 transcription factor (YY1), mRNA. 0.0 2277 99.92 0.194162826420891 NM_003403.4 YY1 Homo sapiens YY1 transcription factor (YY1), mRNA. 0.0 2771 91.86 0.299692780337942 TCONS_00120038_1 sp|P25490|TYY1_HUMAN TYY1_HUMAN Transcriptional repressor protein YY1; 1e-116 341 100.00 0.99375 3 noncoding 0 0 0 0 0.0414096856213393 0.780628833964087 -0.000941780410138496 0.983976407882455 GCGGCGCACGGGCCGTTCGATTGGCCCAGGAGGAGGAGCGAGCAGGCGAGCAGATGAAAAAAAAGATATCGACCATGAGACGGTGGTTGAAGAACAGATCATTGGAGAGAACTCACCTCCTGATTATTCAGAATATATGACAGGAAAGAAACTCCCTCCTGGAGGGATACCTGGCATTGACCTCTCAGATCCCAAACAACTAGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCTGCCATGAGAAAACATCTGCACACCCACGGCCCCAGAGTCCACGTCTGTGCAGAGTGTGGCAAAGCTTTTGTTGAGAGCTCCAAGCTAAAACGACACCAACTGGTCCATACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAGGCTGCGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATGTGCGAATCCACACCGGAGACAGGCCCTATGTGTGCCCCTTCGACGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACACGCTAAGGCCAAAAACAACCAGTGAGAAGAAGAGAGAAGACCCTCCTCAGCCTCGGGAAGCATCTTCCAGGAGTGTGATTGGGAATAAACACGCCTCTCCTTTGTATATTGTTTCTAGAAAAGAATTTTAAAAATGAATCCTACATACCCAAGGGACATGTTTTGATAAAGTAGTAAAAATTAAAAAAAAAAAAAAAAAACTTTAATAAGATGACATTGCTAAGATGCTCTATCTTGCTCTGTAATCTCGTTTCAAAACCACGGTGTTTTTGTAAAGTGTGGTCCCAACAGGAGGACGATTCATGAACTTCACATCAAAAGACAATTCTTTATACAACAGTGCTAAAAATGGGACTTCTTTTCACATTCTTATAAATATGAAGCTCACCTGTTGCTTACAATTTTTTTAATTTTGTATTTTCCAAGTGTGCATATTGTACACTTTTTGGGGATATGCTTAGTAATGCTATGTGTGATTTTTCTGGAGGTTGATAACTTTGCTTGCAGTAGATTTTCTTTAAAAGAATGGGCAGTTACATGCATACTTCAAAAGTATTTTTCCTGTACAAAAAAAAAGTTATATAGGTTTTGTTTGCTATCTTAATTTTGGTTGTATTCTTTGATGTTAACACATTTTGTATAATTGTATCGTATAGCTGTATTGAATCATGTAGTATCAAATATTAGATGTGATTTAATAGTGTTAATCAATTTAAACCCATTTTAGTCACTTTTTCTTTTCCGAAAAATACTGCCAGATGCTGATGTTCAGTGTAATTTCTTTGCCTGTTGAGTTACAGAACGTGGTGCTCAGTCGTAGAATGTATTGTACCTTTAACACCTGACGTGTACATCCCGTGTAACAGAAAGGGCAACAATAAAACAGCAATCCTACAGAAAGAATATGGCAGAAAAAGATCTGTAAGCACAGTCTTATTTCCTTTTGTTGTCCAGAATAATTACAGTTCTTGAGCCTCCCAGAAATTGGAAGCTAAATAAAGCAACTCAAGTTTCCTTTATTTTGCACTCAGTTACAGTGACTTGTGATTGAAGCGATGCATGGATATTTTAATACTTCCCACATGTACTGAATTTTGAAAGAGTAGGTAACAGGCACCCCGAGTTAAGGAACTACCTCAGAGTACCCCGCACCGGGCCCGCTGGTAACAGGATTTTGGTTTTAGCTCCCCCAGCGAATGCGTGACTGAAGCGCTTGTGCCCGGCCTGTGTGTGTTTCTCAAGGTAAGGTGTCACCTGGCAGGGGGCGCAAGCAGAGGGGAGACCAGGCATTTCCACTGCTCAGGCCGCCTTCAGGGCAGCGCCCGCAGGTCCTCACTGGTTTAACAGGAAACGCTAAGGTTATTGGCGGTTTGGTTGGAGAGCCTCGGTCCCTCCATCTAGTGGACTCTGCCAGTGTCAGCACATTGTAGCAGGTGAACGCCAGCAGCTTCCCTCCTTCCGTGCTTCTAAGTGGATAGTGAGTGCAGACTGGCAGGGTGATTCGGTTATCAAGAAAACTGTACTCAGTGAGTACTTGACCTCGTGTTGTGACCTCTTAAATGTACGATTATAATTTCTGGAATTTACTTAGAGTCAAATATCAGACTCGTGAGACTATTTTATAAACTGCCATGATACAGCAAAATCCCATTTATTCAAAATGCAAACATACTGTATGTCTTTGTGCTGTATGCTTGACTCTGCAGAGTAATTGACAGACTAGCTTATACCAGTGATTCAGGTACAAGACGTCCAGGACACCATCAGGTCCAGAACACAGCCCTGTCTCTCACAGCTTCTCCATCGGTCCTGTCCAGGAGGATTGGCGACCTAATGACAGGGACCCTGTGGCCCTCCGGAATTTTGAAGTGCCTTCTGAATCGTAAATGAAAAATTTAACTTGAGACACTTTTTTTTGTTGTTGTTCAGAATCTGTTATCCATTGAGTAGTTTGATGGAACTGAGTTAATCAGAAGACCCCGCTGTTCTCTGGATAAGCCAGGCTTTGCTGTATCTGGCAGTCAGGAGAGAGGTAAGCCTGCGGTGGATGTCCCCTGCGAAGCTGAGCGCCCCAGCGCGAGCCTGTCCTGCTCTGCCTAGACCTGGGGCAGAGGCCTCCACCGCTGCCCGCGACTCGGTGCCCGTGCGTCCCTCCCCACCATCGGGTCAGCAGTCCCCCGAGGGGCTGTGTTAGGGGTCACGCCCTCACCCAGCGCTGTGCCACACTGGAGCCTGGTCCTGACGTCATCCTCAGGACTCCTGCCCAAGGGCCCGCGGCAAGACAAGACTTAGGCCGTGGGGACATCTCCCAGCGGCCCCAAGAGCCATGCCATGACCCTGAGTTGGAGGGAGGTTCTTCTTCCTCTGTGCCTTGACCCCTTGGGGATGCCTTCCGTCATCTCTTCTGTCCCTTTCTGTCTCTGAGTGGAATAGCCATTGCTCCCGTTAACTCTTCTGTGTTTTCACATGTTTTTCTCTCAAGCTGCAGAGTTCATTTCTGAAAGGAATTTCATTGGGCATTTGAAGCAAGTTTAACGCCCAAGTTCCTCCTTGACATAGCGCTCTGAATTTGCAACAGTAGTGTAGGACACGAGTGACAGCTTATAGAGGTAGTTCTCAGCGGGTATAACGTAACACCCATTCTGCTTGTGGTTAGAATTTATAATTTTGCTAAAGATGTAATCTACTAAACTTTGAAATGGTGTTCTAACAGTCGATTGTCTTGATTAATCTGATTTATAAGTAATATACATATTTTCTTACATCTGAGCTGAAATAAATGCATGTTTCTAGCATATGTAATATAAAAACTTGAGAGGGTAAGTTTACATTTAACAAGATGTTGTTTTCTATTTTTGGATTTCTTATATTATTTTCCCCCCTTTTTTGGTGGTGGGGGTTTAGGGGGAAGCATAGTATTTGTATAAAGAACTGTCACCCCAGAGTGACATCTATTTTCCAAGGTGACCTTGAGCTCGCTGTTGGTTTCATATGGTGTGTGTGTGCTGTACCTAGATTCAAGGCCTGTGGATTTGAGGGAAATGGAGATTTTTTTTTTTTTTTTTTAATTTGGTTTTCATGTACATTCTTTTAAATGTCAGTTATTTTGTTAAATTTGAGTAAAATGAAAACCATTGCGATACTCTGCTGGAGGCCTGCGGGTGTTGGCGAGTTCTAGTTGGTTTCTCCGCAATAGATGAGAGTCCTTCATTCAGCGAGAGGCCGAGGCTGTTGAAGCGCTGTCGGTAGGCTTACTGCCGCACGCACTCCTTAGCCAGACTTACCTACTGTACCTTCAACTTGGGATGTGTGTCTGCGGCACAGGAAGACCTGGCCCTCTCCGGTTTCGAGTTGGAAACCTGGTAGTCCACTCCAGGACAGCTACAGGCAGAGAACGAGGATCGCTTCCTGTATCTTGTTTCCTCTAATTTTGGGGTCAGCATGCTTAGCAAGGCCATGTTATTAGTCCTCTGTTCCATCTTCTTGACATCTGACCACCAGCAGAAACAAGGATCCCAGAGGTCAGAGCAGTGGTGAGAGGTTCCCCAGCGTCCCGCGCGGAGCCCGCAAGGCCTCTGTCCAGTGCACGCGGCCTTCGCCTAGCTTCCCCCCGTGCCTGTCGACGGCAGAGCCCTTTGTCCTGTCTCCCCTTGGCCTCGCTGCCGGTACAGCACCTGTCAGAGCTCGGGACCGCGGGGGTGCACTCCTTTGACCCCAGGAGGTCACGGAGGAGGCTGGACCCCTGAGCTGTGCTTCCTGGCGGCCGTGGTCACGCGCTCCACGGTCTGCTCTTCGGCTTTCCAGAACGTGCCCGCGGGAACCCCTGTGCCTGCACAGAAGCATTCGACTGCATGGCTGGCTAGGTCTGCACCCCAGCTTCCCGACTTCCTGGGCCATGTGGGCTGTGCTTAGGTTCCTGGGTTGCCTGAAAGCAGTCAGTGCGGGGCCCTTAAGAGCCTTGGCAGCAGGCAGGAGGGGCGGGCCCTTCACGAGTGGGCGTGTCCCGCGGAAGGCCGTGTCCCGGGAGTGCCTTGTCAGAGAGGATGTTTGCTGGAGACTGGGCTAGATGGAGACCTGATGGGAGGGGCGGGCAGCATACCGTGGACACACTTCATCCGCCCCTCTCCTTCCGGAGACCGGAAGGGAATGTTGAAGGAGAATATGGGCGTTAGGTCAGGAGGCAGATCAAACTCTCCAGACTTGTCGGGCCAGCCCTCATGTCTTTAGCCCACATTCCGGGAGTCTGCAGGGAGGTGAGCGTGGTGGCATCACAACCATCTAAAGCAAGATGATTGATTTTCCGCAAAATGTCAGGTTTGATCAGATTGATTGCTTTTCATTCATTAAAGACCTTCAGACGCCATAAGAAGGAGCACTGGGATGTCATAGGAAGGGGCCGGCTGCTGTTGGTATCTTCTGTTTGCTGCTCTGTCTGGGAGCTTGCTCACTGTCTGCATACAGTATGGAGGTGGAAAGGGCATCAGTACCAAACAGCTATTTTCTACAACATCCATAACTGGTATGAGGCTCTGTTATCTACAGATGGTGATGGGTCAAGCTATCTTCATAAAACAATTCTGTTTTTATTCATTTTCCGGTAACTTCTGTGGGCCCTGGCTCAAGGACTTGGCATTGCGTCTCATGTACATCTTTTTCTTAAATGTTGTTTGCCATTTCTGGAATTGTCCTTGGTTTTTCCTTAGCTCATAGGTCATAGATGCAGAAATATTATAGTATTTAAGGCATCCGCATCAAGCATCAGATGGCTTTGCATCCAGAAAAACATTTAATGATAAACTCCGTTTGAAGCACCAAGCATGTGTAACATGGCTCTATAAAATATAATAAACGCATAATGTTAAGCTTTTTAATGCCTGTGGTTCTTGTTTGTTCCTGGATCTCTAAGCCGCCTGTTGCTGAGTTTCATTACACAGTACAAGTGGCTGTAAGCTCCTGTCTTAACCACTGGACCACCAGGGAAGCCCCCTCACCCACTTTTTAGAAAGCACAACCAAATGAAATTTGCATGCAGTTAGACCCATGACCCCCGGTGTTAGTTCTGGAAGCTCCCTGCCAAAAAAAAAGAAAAACCTTATTCCTAACTGGGATAGACTCTAAAGCTTGGTAAACATATACAGAGAGCTACATAGGATTTGGGGGCAGGGCAACAAAATACTCAGCCCTACCCTCGTCCAGCTAGGGTCCTGGTGACTGCTGGACTGCAGATCGGGGTTTATTACTCCTTAATTCACATGACTTTGCCTCCTCTTTGGAGAGGGCGAGTCCAGGCCCACATGAGGCCCAGAACTGCCGAGGGAAGGTCTGAGGTCCAGCTGTTTTGAGGAGCAGCCATAGTGAAAGAGTGTGTGCATCTTCAGGTTTGAGGTGGGAAGGACCTGGGGTTGCTGGGGCTTTGGAGTTGCTTCCTGTGGTCCCCCCAGATAATAGACGGGCGTCCCTCCTTTGCTTGGGCCCACACCTCCACCCGGCTGTAATAACACTGAGGGCTGGGCTCAGGACCGTACCTGGCACTGTGAACACCTTTTGAGTTAATTCCTCCAGACTGCCCTTGGAGGAATTCCATAGGTTACTCGTGCCAGGGATGAGGGTCATTGGCAATGTCAGTGACTCAGGCTGCCTGCCTTCCACTGCACTCTGCTTGCCACAGTTCATCTCCACCTCCCTTTCGAAAGAATCGCTGGTCCCTGTCTGCGGTGGGACGCCACGGCCTCCTGGCTTCCAGCTCATCAGCCTCTCTGGCTCTTAGAGCATGTCCTGGTCTTGGGTCTGGCTCTCACTGCCAGAGGTTTCAGCTCCTAGGTCTGGCCTGGGTCCCTCCTCTCTGGCCTGCCGTTGGCAACTATGCCAGTCTCCGGCGTGGGGGTTGCCACCTCACCAGAAGCTACTGTGACTCCC EMBV3_26445 AGTGCTGCCCTCTGGTGGTGCTTGCTGGTTAGTGTTGGCTCATTCAGAGAGGTGATTTAT Gene GeneID:282363|SLC6A2:NM_174608:54_cdna Constitutive 0 NULL GeneID:282363 18 GENE SLC6A2 NULL solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 EMBV3_37300 AGAGAACAAGGCTGAGGAGAACCGCTATGTGGTCCGGCTAAGTGAGAGCAACCTGGTCAT Gene GeneID:505716|RELT:XM_002693451:25_cdna Constitutive 0 NULL GeneID:505716 15 GENE RELT TNFRSF19L RELT tumor necrosis factor receptor EMBV3_16972 GAGTCCGGCGCACGTCGGCGGACTGTGGTGACATCCGGGAGACGGCCTTCGTGTTCGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11693 ACTTCGCACCCAGCCCGCATCCGTGTTTACAGGGGACTCGTGCTCACGCTTTATATTTTA Gene BVT0102_385778 + 0 NULL GK000009.2:102893602-102918981 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04567 GCCTGGTGATCTGCCGCGCTCAACACCCCGCCCTCCTTCCTGTTCCTCGCGGGCAATAAA Gene GeneID:788760|EHBP1L1:XM_002699344:219_cdna Constitutive 0 NULL GeneID:788760 29 GENE EHBP1L1 NULL EH domain binding protein 1-like 1 EMBV3_22687 AAGCAGTCCTTCACCATGGTGGCTGACACCCCGAGCTCCAGAGAATCAAGAAGACCCAGG Variant GeneID:532851|LASP1:NM_001035394:132_cdna 335^443 1 EMBV3_39726 GeneID:532851 19 GENE LASP1 MGC128762 LIM and SH3 protein 1 EMBV3_38827 AAGTCACAGTACGCCTTCGTACATCGCCTGGTAAGGAATAGCAAGCACCTGGGGCATCTT Gene BVT0102_044572 - 1 EMBV3_29359 GK000026.2:35717575-35860596 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150937 TCONS_00150936 TCONS_00150934 TCONS_00150935 TCONS_00150938 TCONS_00150939 1 XLOC_091981 Coding TCONS_00150934 XLOC_091981 Coding Coding LOC530353 26:35670363-35719658 j TSS112939 3438 1 TCONS_00150934_3 268 0.0634089586969168 8 0.930417495029821 0.000101529943121872 0.000983522760371403 0.000541627333258757 0.000413994840402465 0.000726354851537074 0.000230100681603235 0.000924702139169581 0.000596611253463242 0.000883447684491424 0.000614791959250089 9.85718328732148e-06 3.13621018580434e-05 4.40310246999045e-05 0.000367509479477018 0.000269643724217492 0.000428256533933589 8.82607296927918e-05 0.0005546559275153 0.000492078641328995 0.000209826768500704 0.000334336368082849 0.000588449628673086 0.000825709524263652 1.62944028440611e-08 0.000695027151458879 0.000631996198781704 0.00018189107699978 3.02677042419832e-05 1.74027126627327e-05 1.74716482961797e-169 XM_003584106.2 TRUB1 PREDICTED: Bos taurus TruB pseudouridine (psi) synthase homolog 1 (E. coli) (TRUB1), mRNA. 0.0 5514 100.00 0.888888888888889 NM_139169.4 TRUB1 Homo sapiens TruB pseudouridine (psi) synthase family member 1 (TRUB1), mRNA. 0.0 2167 75.78 0.877254217568354 TCONS_00150934_3 sp|Q8WWH5|TRUB1_HUMAN TRUB1_HUMAN Probable tRNA pseudouridine synthase 1; 8e-175 491 95.28 0.944029850746269 1 coding 0 0 0 0 -0.472770319154865 0.153253393243424 0.0233471019161742 0.665394158192369 ATTCCAAGAGATGCGCTTTTTCCTCCAACCTGCTTTAGAGGAGCCCCCAGAAGCTGGAATGCCTTCTCCAGAATGGACCAAGAGGAAAAAGCAGACTTTGAAAATTGGGCATGGAGGGACTCTAGACAGTGCAGCCCGAGGAGTCCTGGTGGTTGGAATTGGAAGGGGAACAAAAATGTTGACCAGTATGTTATCAGGGTCCAAGAGATATGTTGCCATTGGGGAACTGGGGAAGGCTACCGACACGCTAGATTCTACAGGGAACGTAACAGAAGAGAAACCGTATGATAAAATAACACAAGAAGATATTGAAAGCATTCTACAGAAATTCACTGGGAATATAATGCAAGTACCTCCCCTCTATTCTGCATTAAAGAAAGATGGCCAGAGACTTTCAACTTTGATGAAGAGAGGTGAAGTAGTAGAAGCAAAGCCTGCCAGGCCAGTTACTGTATACAGTCTCTCCCTTCAGAAATTCCAGCCACCATTTTTCACACTAGATGTCGAATGTGGAGGAGGTTTTTATATCAGAAGCTTGGTCAGTGACATTGGCAAAGAACTCTCTTCCTGTGCCAATGTGCTAGAGCTGACGCGAACCAAACAGGGACCATTCACCCTGGAGGAGCATGCCCTGCCTGAAGACAAATGGACGATTGATGACATTGCACAGTCTCTCCAGCGGTGCTCATCTCTTCTCCCAGCAGAGCTGGCACTTAAAAAATCAAAACCTGAGGAGTCTAATGAGCAAGTTTTGAGCTGTGAGTGTATAACTCTGAATGAGACAAAGGGAGAAGACGATGTAATTAAGACACTTTAAGACTGGCTTGGGATTGTTATCATTTCCTCATTGACATTTGAATCCTGTGTGCAGAATGACAGGCTTCGTGCAAAAGACAAATGATACCTATGGGTTTTTTTTTATTTTTTTGCATGAAGAAAAATGTCCATCATTTATGGTTTCTATGGTGCACAATTTATCTGCTGTACATTATAAATAGCCCTGCAGTTGTTCATTTCTTGTTCTATAGAATATTGTCATGCTATTAGATCAGATTCAGGAAAAGCAACTTTCTGATTTTGATCTCTCTTAAAAGTCTTCTCCTATGAAAAAGTTGACCATATTTTCTAATCAGAGGGGAAAAACAATGAGCTACATGTTTCTTTGGTGTCATGAAGTGAATGTGTATTTGTTTCTTTGACTTTATTTTGGCTTCCTGGTGGCTCTGGTTATTGAAACTCCTTAACTATGTTTGAAAAAGCCATTATTTAACTCTTATGTTTTATAGAGTTTATGATTATTAAGAACATTTCTTTAATAATGTTATACTTATCTTGGTAATAGCTGTGTTTGTTTAGATCTTGGAAACTAATAAACTTTTATAACAAATATTTCTAAATGAACCAAATTATTGCTGCTACCACTAATGGAAGGTAAAGAGAAGACTAAATGTTTAATTAAATTCACCTCTACTCCACCATTAGCATAGGACAGCTCCTATGGCTTATGTTTTGGCAGCTATGAGATGTTTTCCTGGTAATCAATACAGTTGACCACCCTGTGCCAATATACTAAATAACCTAATTTTAAAAAATTAAGCTAAAGAATGTGTCTTCAATTAAAAACTTCTTTTCTTTATTTTTTAGTATTTATTTATACCTTTTTCTAGGGTATCAAGCCCCTGGTATTTTTTCAGTTTGCTTTTTCAAATGATGTTTACAAATGCTGAGGTTTGCCGTGTATTTGCAGTTAATCCCTTCTCTTTAAATGTTGAAAAACAGTTGTTCTCAAACATTTTCATTCAAGTGGCCTACTGACAGGTCCCTGTCCCTCTTCACCATAGTTTTGAAAACAGTCACATTCCAAAAGAATAAATTTCATGTATAATGAGTGCTTCATATTTTTGTTATGGGAAAGCAGTATATAATGCAGCCAGTCTGTTCAAATCCCACTGCATTTATTCAAATAAATATAGTTTCAAAGGGAAGAGTTGTTAAATTTTCATCAAATAAGAATTTTTAGATTTTTATGGATTGTCTTTCTTGCAAAGGTAGTTGTTTTGTAACCTCTAACCTCGAAATTTTAAATATGTTAAAGAAAAATGGTCGTATTTGTGGTGAACCTCATATAAACTCAGTCTAAAAAGTTACATGCTTCAGTAGAGCACTTTCAGCGTATTGTCAACATTTTAAAAACGGAACTTTCTTAAATGACACAGAAAATGATAAGGAAAAGAGCTAGTTATCATAATGCCTTAAATAAAACTTCAGACATACAAAGTTGTAAGCTGAGACTTTTACAGCTTTGCTTGTGTCCAGTGCCCTGCAGTTTGCGTAACCAAAGGTGGCGGTGGTTGCCTCTTCCTGTTGGAAAGGGACAAGTCACAGTACGCCTTCGTACATCGCCTGGTACGGAATAGCAAGCACCTGGGGCATCTTGGCTGTTTCTCAACTTAAATTTTGGCATGCATAGTTTGCTAATGGTAAAGAGCATAAATGTTTTGAAAAGACAAGTGACTTTCTGAAATGGTAATCGATCTTTTTCTTTTACTGAAAACACTGAAGAAAATTTTGCCAAATGGAAAAATTACCCGTAATCGTCACCACCTCGCTGAAGTGACTTCAGAACTTTCATTTTGTATTACTCTTTTTTTAACTATTTTTTATTTCATATTATTTGACTATTTGTATTTAGTTTTGATAATGATTATTTAATCTTTTTACTTTATTTAAACCATTTCCCTATTGCTAAATTCTTAAGTTTATTTTCAGTTTTATTAGGATAAGTTCCTGGAAGTGGAATTATTAAATGAAGTAATATAAACAGTTTTATGGTTCTTAGTAAGTTTGCCTTATTGCTTTCCCAGGGAGTTGTAACATTTTACAGTGTTACCATTTGAGTATATCAGTTCACCAGAAGTTTACAGCTTTGAGTGGGGGTTTTATATGTTATTGTTGCTAATTTAGTAAGTTAAAAGAGTTCAAAATTGCCAGTTTACCTCTGTGTGACTTTTTCATATACTTTGTCACTTGTATAAATAAATGTCTTAATGGTTTCTTTATACATTTGTGTGAGTTATTTGTGCAGTAAATACTTGGTAGAAGTATTTTCATGGTCTGTTGTCTTTTTTTATTTTAGTTTCATTTTTCATTTTTACTGACTAAATTTGCTAACTGATTTTAAGAATTCCTTTATAGTTGCCAGATTTATGAGTATGAATAGTTAAAATTTATTGAAAATTAAAAACATTTTTAACTTTCATAAGCAGCTGTAACTGATCAAGATGCTCTAAAAAGTTTGACTCGCCCATAAAACAAATTAGTTTTCTCCTGAGTCTGGTATTTATGTACCGATTGCTTCGTTTTTTTCACTTTAGTCAAAATATTAAATACCTGTGCCTATGTATTTCATGTCATAATAAAGTTGTCTTATTTGTAAGA EMBV3_39798 ACTTTCGCATCGTGCGCGGAGCCAATGAGTGCGACATCGAGAGCTTCGTGCTGGGCGTCT Gene GeneID:509642|TINAGL1:XM_002685619:284_cdna Constitutive 0 NULL GeneID:509642 2 GENE TINAGL1 NULL tubulointerstitial nephritis antigen-like 1 EMBV3_40618 CAGAAAGAACCTATGATAGGAGTGAATCAGAAGAGTCAAGTGAATTCTGAGGGACTCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13738 GAATCCGCTGGACCCGCGGCGGCGCGGCAGGTGCCCAGGAGCTGCCCTCTGCTGCCTCGT Variant GeneID:536988|CAPN5:XM_002693484:111_cdna 69^142 1 EMBV3_26703 GeneID:536988 15 GENE CAPN5 NULL calpain 5 EMBV3_13621 GTTGGGAGCTGTATAATGTGAAAGTTCTGCATACCTAGGAAAGAGCCATGTAAATATATG Gene GeneID:767836|PNRC2:NM_001076957:302_cdna Constitutive 1 NULL GeneID:767836 2 GENE PNRC2 MGC140026 proline-rich nuclear receptor coactivator 2 EMBV3_14663 CCCAACATGCACAGTCTGGCGACGGCTGCGGTCGGCATTTCTTGCAGCACACATCCCACT Variant GeneID:536537|RQCD1:NM_001101167:107_cdna 141^436 4 EMBV3_29224 GeneID:536537 2 GENE RQCD1 NULL RCD1 required for cell differentiation1 homolog (S. pombe) EMBV3_23649 GGAAGTCTTGCCTGTCTAGAGTCCTTACCTACTCCCAGATGCTCCTCAGAGACACTGTTT Gene GeneID:509157|NHEJ1:NM_001075393:68_cdna Constitutive 0 NULL GeneID:509157 2 GENE NHEJ1 MGC139115 nonhomologous end-joining factor 1 EMBV3_24406 AGTAAGGACAGGTGGCTTTCCTACCTCTGAGCCTTCTTTGGGGAGGAGCATCATGGAATG Gene GeneID:616899|LOC616899:NM_001083775:149_cdna Constitutive 0 NULL GeneID:616899 11 GENE LOC616899 MGC157361 hypothetical protein LOC616899 EMBV3_28579 ACTTGGTGGGTGCAGCCTGATGCTATGTGTGGCAGAGGTTCCCTTCCTCATCCCTTTATA Gene GeneID:504583|PIGS:NM_001034216:52_cdna Constitutive 0 NULL GeneID:504583 19 GENE PIGS MGC127129 phosphatidylinositol glycan anchor biosynthesis, class S EMBV3_31900 CAATGCAGGGGACATAGGTTTGACTTCTGGTTTGGGAAGGTTCCATGTGCAGGGGAGCAA Gene BVV0102_107869 + 0 NULL GK000006.2:98972450-98983516 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210403 1 XLOC_128913 NonCoding TCONS_00210403 XLOC_128913 NonCoding NonCoding - 6:98979552-98981269 - TSS157910 1717 1 TCONS_00210403_1 72 0.430401863715783 1 0 0 0 0 0 0 0 0 0 9.19060212043615e-06 2.39632944318594e-06 5.33299820488415e-06 4.58155368931812e-05 0 0 0 0.000138441533109146 0.00165346004602894 0.000423783214810861 0 0 1.76804494863961e-06 0.00119067870872114 2.67152607275372e-05 0.00114237888861671 0 0 0 5.03474170035191e-05 0 0 XR_231886.1 LOC101908184 PREDICTED: Bos taurus uncharacterized LOC101908184 (LOC101908184), 3e-61 241 93.21 0.0926033779848573 0 noncoding GGGTCTGTTTATTTTCTGGTCATTCAAATGCATAATTTTTAAAAATTATATCTGTACAAATATTTTATCATTTTTCCAATTATAAAAAAATTACATACTAAAAAGTGACTTTTCTCTTTCCTTATCTCCAATGATGTACTGAGGATATAGTTAAGTCCTAGAGAGTAGCAAAAATTATTGGACTTGTTTTCAGTATCTTATTAAAAAATCTTTTTTTACATATACACGCTGCTTCGTAACTACTTTTAGTTACGCTGGGTCTTCGTTGCTGCACTCAGGCAGTGAAGAGAGGCTACTCTCTAGTCGCGGTGTCTTGTTTTGGAATTTGGGCTTTAGGGTGCAGGGGCTTTGGCAGCTGCAGCATGCAAGCTTGCTGCTGGCTTTTTGCAACTTGCTGGCTCTAGGGCACGTGAGCTTCAGCAGTTGTGGCACAAGGGCTCATTAGTTGTTGCTTGTTTGGCCATAGAGCATGGAGGCATCAGAAGTTGCTCCCCTGCACATGGAATCTTCCCAAACCAGAAGTCAAACCTATGTCCCCTGCATTGGCAGGCAGATTCTTACCACCGGGCCAGCAGGTAGTCCTATTTCCAGTATTTTAGAAGTAAGTCACATGAGGACTTCCCTGGTGGTCCAGCAGTTAAGAATCTGCCTGCAGAGGCAGGGTTCAATCCCTGGTTTGGGAAGCTAACACATGCCACAGCACCACTAAACTCCTTAGCCACAACTACTAATCTGACACTCTTACAGTCTGTACTCGACAGCAAGACAAGCCACCACAATGACAGGTCTGCACCGGTGAAGACCAGCCCCCACTCACTGCAAGTAGAGAAAACCCTCAGGCAGCAACAAACCCAGTGCCACCAACAATGTTTAAAATTTTTGATTGAAAAAAATCACATTAAAATATGTGTAAGAGCTAATGGAAATACTTGCTTTTTTTATTTTACCTGGCATCAATAAATTGATGTTATAATGCCGAGTATCACTGTACATGTTCTGACAGCCATATGCCTTTAATAGAAATGTCACTACATAATGAGAGCAATATGTGACACATAAGCCATTCAACATAAAGGCCATGAGAAGGCTTTCCTGATAATGAAAAATACTGGAATTATGCTATATTTTAGTCTTCACTGACACACCCTCTTTTGGTCCCTCTGAATTGCCCAAGAACTTCTATGTATCAAATGTCTTGGTTCAAAGGCAACCAAAGCAATGAGTCAATCCCATAGGACAGCTCTCACTGGAGTAAGTAGTTGCTCCAGTTTATCTAGGCCCGTTTCATCAGAATAAATCAACTGTAATAAAATCCTACTTACCTACAAAAGATCTTGGCATCAACCTTAGTAAGATCACTCCTAAACACTGAACCTAAGCCTCAGAGATGCCTGATAGGACTGTAATAGATCCCAAATGAAATGAGTTAATTTTCTAGTAGCTAACTCCTTCAACTTGAAAAATCAGGGATTTTCCAGAGGTTATTTTGCAGGGCTGGGCATTCCTGTCTCATCCACCACCCTGTGTGTATGTTCACCAGCCAACACACAATTTCTGAGTTCAGTTCAGTTGCTCAGTCGTGTCCGACTCTTTGTGACCCCAGGAATCGCAGCACGCCCGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTGACTCACGTCCATCGAGTCAGTGATCCCATCCGGCCATCTCATCCTCTGTCGTCCCCTTCTC TCONS_00205909 TCONS_00205910 TCONS_00205911 TCONS_00205912 TCONS_00205913 TCONS_00205914 . 3' 1910 TCONS_00205909 TCONS_00205910 TCONS_00205911 TCONS_00205912 TCONS_00205913 TCONS_00205914 . 3' 3626 EMBV3_00380 CTCATTGATGAGAGCTGACTGCACGGATTGAGATCAGAATGTAGCTCTTCTTCTATACGC Gene BVV0102_203988 + 0 NULL GK000027.2:26156004-26260212 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15455 TGTCCATGGGAATGCGGGGATCTCCAGGAGAGATGCGTTTGCTTATGTTCAAGAAAGAAG Variant GeneID:616825|STYX:XM_002690461:355_cdna 652^702 3 EMBV3_04106 GeneID:616825 10 GENE STYX NULL serine/threonine/tyrosine interacting protein EMBV3_31699 GAGAAAATTCGGCCAGAGTTCTCGCTCTTGCTGGGTCTGCTCAAACCACCATGGTCTGAT Gene GeneID:100335305|LOC100335305:XM_002694808:660_cdna Constitutive 0 NULL GeneID:100335305 18 GENE LOC100335305 NULL ribosomal protein S29-like EMBV3_41427 CTTCCACTCCGAGGAGACGTTACTTTTGGAGGATCAGAAAGAGGGCATTTGGTACCTCGC Gene BVV0102_058557 + 0 NULL GK000003.2:111525672-112155591 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174772 TCONS_00174770 TCONS_00174771 1 XLOC_104684 Coding TCONS_00174770 XLOC_104684 Coding Coding GJB5 3:111523590-111541152 j TSS129621 1835 1 TCONS_00174770_2 273 0.163487738419619 3 0.895677922669552 0 2.23481043599159e-10 1.73546585502367e-10 1.68799760832631e-10 5.23241039150345e-11 0 4.52921622058027e-11 1.56611835650394e-10 0 8.15748007368349e-06 4.37428611920883e-06 1.95865389948957e-05 0 0 0 0.00439953061269859 0.00477673629599748 0.00200250621634118 1.19501064523236e-10 1.80637139970282e-10 6.0305049369264e-48 0.00575175950218539 0.00292961519724547 0.0053808335312667 7.4914423005392e-11 6.39329887820755e-06 2.59092990001704e-24 0.000879274401034242 0.00215317884763406 0.00394024402917471 XM_005204751.1 GJB5 PREDICTED: Bos taurus gap junction protein, beta 5, 31.1kDa (GJB5), 0.0 2850 100.00 0.860490463215259 NM_005268.3 GJB5 Homo sapiens gap junction protein, beta 5, 31.1kDa (GJB5), mRNA. 0.0 951 78.16 0.637602179836512 TCONS_00174770_2 sp|O95377|CXB5_HUMAN CXB5_HUMAN Gap junction beta-5 protein; 1e-164 462 80.95 0.996336996336996 2 coding 0 0 0 0 -0.0509989361221393 0.73504544291415 0.00245357845022259 0.971379617136495 GGGATTTCTCTCTGCACCAGCTTCCTCCGGGGGAGTAGAAGGTTGGAGGATTTCTCTGAGGTCAGATCGTCAGGGTTCCCCTGCTGTAGGGTTGGGCCTTGGTCACACCCCGTCCACCACCTTGGCTGCGGAACTCGAGGCTGCCGTGGAGAACAGGGCAGAGGTTGCCCTAGCAGCTGCCCGGGCTTTCTTTGTCTTGAGGACACCTTCGTTTTCCCTTCTCTGCATTGCCCCAGACTTCCACTCCAAGAAGACGTTACTTTTGGAGGATCAGAAAGAGGGCATTTGGTACCTCGCAACACACCCGCCAGCAATTTGATTTGTCAACAAGAAAAGTAACTCAACGTAAAAAAAAGAAAGAAAGAAAAACGAAAAACTTCTAAGAAAATAGCCACCAACACCGGGGGCCACCATGAACTGGGGGATCTTCGAGGGGCTCCTGAGCGGGGCCAACAAGTACTCCACAGCCTTCGGGCGTGTCTGGCTGTCCCTGGTCTTCATCTTCCGCGTGCTGGTGTACCTGGTGACAGCCGAGCGAGTGTGGAGTGATGACCACAAGGACTTCGACTGCGACACTCGCCAGCCGGGCTGCTCCAACGTGTGCTTCGACGAGTTCTTCCCCGTATCCCACGTGCGCCTCTGGGCCCTGCAGCTCATCCTGGTCACGTGCCCCTCGCTGCTTGTGGTCATGCACGTGGCCTACCGCCAGGCCCGGGAGAAGAAGCACCAAGAGGCCATTGGGAAGGACGGCGGGCGCCTCTACCTGGACCCCGGTAAGAAGCGGGGAGGGCTCTGGTGGACATACGTCTGCAGCCTGGTGTTCAAGGCCGGTGTGGATGCCACCTTCCTCTACGTGTTCCACTCCATCTACCCCAGATACACCCTCCCCCGAGTGGTCAAGTGCCAAGTGGCCCCGTGTCCCAACGTGGTGGACTGCTTCATCTCCAAGCCCGAGGAAAAGAACATCTTCACTCTCTTCATGGTGATCACGGCCCTCGTCTGCATCGTCCTCAACCTGGTGGAGCTGGCCTACCTGGTGAGCAAGAGATGCCGGGAGTGCCTGGAGGCCAGGAAAGCCCGGTCTGAGAGCCTGGACCACCGCCTGGACTGGGTCACCTCTTCTTCCAAACAGGGCGATCTCCTCTCAGGCGACCTCATCTTTCTGGACTCAGATGTTCCCCCTCCACTCTTACCAGACCACCCTCAAGACCACGTGAAGAAAACCATGCTGTGAGGGGCTGCCTGATCAGGCCTGGGTTGGAAGGACCCAGGAGCCAAGGTGCAGCCTTGGGGGTGCGGGTGCTGAGCTGAGAGTAGGGGCAGACAAGAGGGAGAGTCAGGCGGCCTGGGTTCAAATCCTTTCTCCCCAAGTTCCTGCCACCTGCACCAGCTGTGTGACCCTACGCGAGTTACCACCTGGAGCTGAACCTCGGTTTCCTTTTGTGTACAATGGAGATGATGAGCCCTGCTGAGCAAAGCCGGCGCTGTGAGGAGGGCTTTAATAAGAGAATATACACGCACATGCCTCCAAAGTGTGGGGTCCACGGTCAGGGCTTAATAAAATTCAGTTCATTCACTGATTCAAGGAGACCTTTGCTCCTTCAACCTTGGTGAGCTTTATTGACTCCTTTCATCAACTTTTCGGCCCCTGCACAGGCTGCACTTGATCTAGCCAGGTAAGGACTGACGTGACTTAGCAGCAGCAGCAGCAGCAGCAAGAGGACCCCCAGCACTCCTGGGGGGTCATGCTCCTTGCTCTGGGTCAAGTCTAGCCTTTATCCCCAGTTGCAGTTTTTAGGCCCATGGGTTGTCTGCAAAGAGAATAAAGCTTAGTG EMBV3_34870 TGGCCATGCACTGATGCAGGAGGTTTTGAAAGAGGGGTGTATTTCACCTCGTTACTTGCT Gene BVT0102_208129 + 0 NULL GK000013.2:34983089-35065346 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29398 ACAATTGGAAGTAACCAAATGTTCCAAAACAGGGGAATGGTTACATAAAATGTGGTATGT Gene BVT0102_421758 + 1 EMBV3_19999 GK000030.2:4735502-4753537 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35324 GGAGGGAAGACAGAAATGGAGAATTCAAAAGGAAAGTTGCCCGCTGTGTAAGAAAAAGCC Gene GeneID:613676|UBE2G1:NM_001082458:171_cdna UTR3_Alt 3 NULL GeneID:613676 19 GENE UBE2G1 NULL ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) EMBV3_05801 AACCAGTATATGTTTCAAAAGTACATTATGCTGGACAGCACGAAGTTGTAGCTATAGGCA Variant GeneID:537320|ADAD1:XM_002694395:29_cdna 599^724 2 EMBV3_17225 GeneID:537320 17 GENE ADAD1 NULL adenosine deaminase domain containing 1 (testis-specific) EMBV3_35960 CCTCTCCTGCCCTCGTTGTTCTGCACTCTGTAAAACGTGAAGCTCTCAAATGGTAACCTA Gene BVT0102_201266 - 1 EMBV3_39845 GK000021.2:28974131-29284082 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123473 1 XLOC_075025 NonCoding TCONS_00123473 XLOC_075025 NonCoding NonCoding TJP1 21:29047603-29048797 i TSS92232 1194 2 TCONS_00123473_2 40 0.126465661641541 1 0 0.0007406797584497 0.00102672535672929 0.00010075544566137 0.00069548930965379 0.000157129767927625 8.98760473410911e-06 0.000141641664543004 0 0 6.89195235990415e-06 3.8344666290185e-06 0 0 0 0 0.00291987159264426 0.000319810364480865 0.00100867870316795 0.000444429349836329 0.000301148772513322 2.542484177628e-05 0.000223738835464597 0.000514792375449465 0.000982851458097156 0.000533853218739547 0.000247831311717242 0.000942174953562171 7.24008121225475e-05 0.000182962457265523 0 XM_005196209.1 LOC101908662 PREDICTED: Bos taurus uncharacterized LOC101908662 (LOC101908662), 6e-100 369 100.00 0.17001675041876 0 noncoding 0 0 0 0 -0.203434541613694 0.230333226932112 0.0150653965337755 0.821733522996083 GGCGGAAAGCGCCCCGGAGGAGCGAGCCCCCCCGTACCCAGCCCTTGCGACTTGGAGAGAGACGCCCCTGGCCACGACCCCCGCTGCCCGCCTGCCTGAGCCTCGCTGGGAAGTGCTTCCAGGCTGTCGTAGTGGACGGACCGACTGCCCCGCGAACGCTGGTCACGGGATCATGGGCACCCGAGGGCCCACCCACATGAGGCCTTTATAGAGATCCAGCATCACCTTCAACAGCCCATGTAGACAGGGATCCCAAACGCATATTTTGGGCATCAAAAATCCTAGGATTCTCAGTGGCAAGGGAAGGGGTCGCGCCGGGCAGAGCCGCGAGGACGTTGGGTCCACAGTCCAGGGGACCAGCCCGCAATGCAGACGGCCTCGCTAGACACCAAGGAGTATTTCAGAAACCTCTCCTGCCCTCGTTGTTCTGCACTCTGTAAAACGTGAAGCTCTCAAATGGTAACCTAAAGAACCTAGTACAGTGCCGCAAAAGGTACACAAGAAATGGAAAAAAGCAGAAACGATGGTTTCCTCTTTAGAATTCAACTGTAGGGAAAATCTAACTTAACGAAGAAATACCTGCCTATCATACATAAAAATGAATTAAAATTTCAAACTAAAATACCATACATTTTGCAACCTGAAGCTACAGAACTAAAGTGAAAGTTGTTCAGCCGTGTCTGACTCTTTGCGATCCCATGGACTATACATTCCATGGAATTCTCCAGGCCAGAATACTGGAGTGGGTGACCGTTCCCTTCTCCGGAGGATCTTCCCAACCCAGGGATCGAACCCAGATCTCCCGCTTTTAGGGAATTTAAAGCATTCTGCAAATCAAATCCTTTCTCTTTTCTCTTCCTCTCCCTGCCCTCCCCCCACAGAAATGATTACAGTCATTTTTGTTTTAAAGTCATGTTGGATGTGACTTTTGTTTTATTCACTTCAGAACTGTAATGAAAAATTTCTTATGAACATTTTTTCACTGTGGCGTTTCATTTTTTATTTTCAAAGGTGACTGTGGAAAAACCTTCCACATTATTAATCTACCCATTTAATAAGATGTGCAGTCAGCATGACCTGCCCAGAACCAGATACCATTCCTTTAACAGACCTAAACCTGGAAATGTTTAGAACAAACGCAGAGACCTTTCCTCTTTCCTCGTTTGTCACTTTTCACCAGGCCTACTGTACCTA TCONS_00120912 TCONS_00120913 TCONS_00120914 TCONS_00120915 TCONS_00120916 TCONS_00120920 TCONS_00120921 TCONS_00120926 TCONS_00120907 TCONS_00120908 TCONS_00120909 TCONS_00120910 TCONS_00120911 TCONS_00120917 TCONS_00120918 TCONS_00120919 TCONS_00120922 TCONS_00120923 TCONS_00120924 TCONS_00120925 TCONS_00120930 . 5' 12 TCONS_00120912 TCONS_00120913 TCONS_00120914 TCONS_00120915 TCONS_00120916 TCONS_00120920 TCONS_00120921 TCONS_00120926 TCONS_00120907 TCONS_00120908 TCONS_00120909 TCONS_00120910 TCONS_00120911 TCONS_00120917 TCONS_00120918 TCONS_00120919 TCONS_00120922 TCONS_00120923 TCONS_00120924 TCONS_00120925 TCONS_00120930 . 5' 12 EMBV3_17258 CCTTTGAAATAAGAGGAACTCTTTTACCAGGGTAAAGCTGACATTAGAGGGTCTGGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10656 TGGTGAGGGGCGGCTGGCTGTGGAGACAGAATGTGCAGCCCCCAGAAGGCCGGAGCCGAG Variant GeneID:511885|PLEKHB1:NM_001046103:55_cdna 197^349 5 EMBV3_40480 GeneID:511885 15 GENE PLEKHB1 MGC128483 pleckstrin homology domain containing, family B (evectins) member 1 EMBV3_40206 CTGGACGCCGGCATGGATAGCAGCTACCAGGAATTGATGTCAACATAAAGGATAACCGAG Variant GeneID:532631|ANKS1A:XM_002697185:236_cdna 745^820 1 EMBV3_03624 GeneID:532631 23 GENE ANKS1A NULL ankyrin repeat and sterile alpha motif domain containing 1A EMBV3_16872 TGTCCGTAATCAGACGATAGTTGCCTAAAAATTCTTGTGTAGAATTGGTGGCTTCCTCCC Gene BVV0101_039967 + 0 NULL GK000015.2:1889721-1898158 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38656 GACCGGAAAAGTAGTAACGGTCTTTTCATTTGCAAGAGGCTCAAATGTTTTCAGCTAGGA Gene GeneID:507482|FMR1:XM_002699624:19_cdna Constitutive 2 NULL GeneID:507482 X GENE FMR1 NULL fragile X mental retardation 1 EMBV3_24972 AACCTCTCCGAGACCCAGGTGAAGGTCTGGTTCCAGAACCGCCGCACCAAGCAGAAGAAA Gene GeneID:539808|VAX2:XM_002691230:80_cdna Constitutive 0 NULL GeneID:539808 11 GENE VAX2 NULL ventral anterior homeobox 2 EMBV3_06949 GTCTGGTTTGTGGACAGTCTCCGTGAACTCTCTCAGTCACACTGGGCTGTAGGAACGAAT Gene BVT0102_299648 + 0 NULL GK000018.2:55787939-55803983 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34014 CCACGGGTGCTGGAGTCAGATGTTGAGCGTGTTGTGTAAACACTTGGCTGTTTGGTGACT Gene GeneID:505086|LOC505086:XR_084554:357_cdna Constitutive 0 NULL GeneID:505086 25 PSEUDO LOC505086 NULL similar to zinc finger protein 598 EMBV3_13528 TGGACCTACTGCCCTCTAATTGAATGGACTTTCTAATCCTGTACAGTAGCCGTGGAAAGC Gene BVV0102_048730 + 0 NULL GK000003.2:8029970-8033834 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171864 TCONS_00171863 1 XLOC_103929 Coding TCONS_00171863 XLOC_103929 Coding Coding FCGR2C 3:8032015-8040506 j TSS128102 3801 1 TCONS_00171863_2 230 0.411996842936069 4 0.552767962308598 2.70494311710342e-05 0.000105745092383459 0 0 5.00261451762453e-06 1.88173406516361e-06 0 1.71170318843484e-05 6.89234897281034e-10 0 0 0 0 0 6.07926522914853e-283 0.00591669732528388 0.0039047231117294 0.00520492942757148 9.71992291817209e-225 0 3.19429988998991e-06 0.000902916802652813 0.000245308290788978 0.00262074979931214 2.32628227723987e-06 0 6.72051589822655e-06 8.89810509998935e-06 1.14179245864864e-06 1.01100247061299e-05 XM_005203553.1 FCGR2C PREDICTED: Bos taurus Fc fragment of IgG, low affinity IIc, receptor for (CD32) (FCGR2C), transcript variant X1, mRNA. 0.0 3606 100.00 0.525651144435675 NM_001002273.2 FCGR2B Homo sapiens Fc fragment of IgG, low affinity IIb, receptor (CD32) (FCGR2B), transcript variant 2, mRNA. 2e-124 452 75.11 0.17416469350171 TCONS_00171863_2 sp|Q28110|FCGR2_BOVIN FCGR2_BOVIN Low affinity immunoglobulin gamma Fc region receptor II; 1e-152 431 95.35 0.930434782608696 2 coding 0 0 0 0 -0.119675792995378 0.368976754502131 0.0190952771610301 0.684560771403925 CCTCGAGAGAAGCCAGTGCCTGTCGTGCAGGGCTGTCAGAGCAACCTGCTCGCTCCAGGAGGTGATGGGGATCCCCTCATTCCTAGCCTTCCCTGCTGCCAGGAGGAACCGAGCTCACTGCACGCCCTGGCATCCTTGGGGCCACATGCTCCTGTGGACAGCTCTGCCTTTCCTGGCTCCTGTTCCTGGGAAATGTGATCTCCCAAAAGCTGTGGTGAGCATCCAGCCTGCGTGGATCAATGTGCTCAGGGAGGATCACGTGACGCTGATGTGCCAGGGGACCAGCTTCTCTGCAGGCAACCTCACCACATGGTTCCATAACGGGAGCTCCATCCACACCCAGAAGCAGCCCAGCTACAGCTTTAGGGCCGGCAGCAATGACGGTGGGTCCTACAGGTGCCAGAGGGAGCAGACCAGCCTCAGCGACCCTGTGCATCTGGATGTGATTTCCGACTGGCTGCTGCTCCAGACCCCCAGCCTCGTGTTCCAGGAAGGGGAGCCCATCATGCTGAGGTGCCACAGCTGGAGAAACCAACCTCTGAATAAGATCACGTTCTACCAGGATGGGAAATCCAAGACATTTTCCTATCAGCGCACCAACTTCTCTATCCCACGCGCCAACCTCAGTCACAGAGGCCAGTACCACTGCACAGCGTTTATCGGGAAGATGCTACACTCATCACAGCCAGTGAACATCACTGTCCAAGATGGGAATGAAGGTTGTTCAAGGAGATGTACATCTTGGAAAGATGGGTAGTGAGGGGATTACTAATCTTCTGGACTCCAGAATGTTTGTTTTCCTGGGAGCGCCTGTTTAACATAAACAGGAACCCTGAAAGTCCTAGCTTGGCCTGATGGTTATATGAATGTGAAGCTGTGTTCCCGGTCATTTCTCAGGGATTATAGAAATGGGTGTCATTTATTTGGTGTTTTAACTCTCAGGGGACAAAATCCACCTTTTCAAGCTCCATATCCAATTCCCAGACATTGCCATTCTCCCTCTTTTGCATCTCACTCAAACCACTCTATCATGTGTCTCTCCCGGCGTCTAATGCTTGCTGCGTTTCCCTACTGAGCCTCTCACCCTAGGATCGACTCTTAGCTTGCTGCAGCCATGTTGGCATTAGAACCTCTCTCTACACATAAAGAACTAGACTTCTGCCTGTTCTTGAGAAACTGTACATTGTGGAATCCATATTATGTCCTTTCAGACGGTATCACAGATTATTTATGCCAGCCTGATGTTCATTAGTGAGTACCCAGCCCTGGGTTCAGAGGAGGTGGTGAGTGAAGATGTGTTGATGTCATCTGTGTATTCCCGAGTTCAATGTTGCCCAAAGGCTGTTCCCCAATCACATAACTCTTTGAGAGCCCTTTCAGAATGAAGGGTTCTGTGGTCAAATTAATGCAGAACACACTACATATTCTTTTCCTCTCCTTTTATATTCATAATGCACACCAAAGGCTTCAAGAAGCCCTGTCTCAAAGAAAACTTTTAAATTGAGCCTGGTAAGGCATTTGCTAAACTCAGGTAACCACAGAACCCTTCTTCTTCTTCTATAACTTTTCTTAATGTTCTGCAGAACAGATGTGTTTGAGGTCATCCTTTGGGAAATGCCGATCCAGCACTTTATTTGGGAAGGCAGACAGACGAAGCGATCCACTGAAGACTTCCTGGGGTAGCTGTCTGCTCCTGGCCTTGGCTTGGGTTGCTTTGCAAAGACTCCTCACTAGGGACATGACTGTTCCAAATTTCTGTCTTAACAACTGTAATTTTTCCTATTCCTCTGCCTCTCCGATTAGGTCCAGCAGTTCCACTCATCTTTTCACCTTGGTATCAAATCACTTTCTGCCTGGTGATGGGACTCCTTTTGGCAGTGGATACAGGCCTGTATTTTTCAGTGCAGAGAGACCTTCAAAGCTCCATGGGAGACGGGAAGAATAACAAAGTCAGATGGAGCCAAGACCCTCAGGACAAATGACCCTTCATTCCATGGTGTAACAGCAGTAGTGGCAGCAACTCTTCAGTCCATAACTTTCCTCTTCCCTGGCCTCACTTTGACAATAACCTGGGCTAAGGAGCCTCCAGGGAAAGAAAAGACCTGTGATCTCCAGATCAAGTAGAAGGTAACAGGCCCTGCCGCTGCTGCCGCCGAGTCACTTCAGTCGTGTCTGACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGAGATTCTCCAGGAAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACCCTCAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCCTCCCTTCACTGATTTCCCAAAGGCTAAGGCACAGTCCCCACCCATCCAGCTCTACATGGACTCACAGCAAATGTGTTCTCCCAGCTCCTCGCTAGAGGCTCCTCAAATATATGAAGCCTCAGTAAATCCTGGTGCTTCTTTCAAAGTAAATCCAACAATCTTCTCACTTCTCACAGGCTGCAGAAGGGCTCACGGGGGCCGGGGCTGCCTGGAGGGATGGCACAGCCCCAGGAGGGGGGTGGACGTGGCAGCATCTTGATCCAAGCCACCATCCTCTCTTACTTGGATTACTGCAACAGCCTCCTGCCTGGTCTTCCTGCACACAACCATGTCACCCAACAGTCTATTCTCACAACAGCCAATGTGTGTTGTATCTGTCACTTCTTTTCTGGAAGCTATGTAATAGCTTCCCCCTTGCATTTAGAGTAATAGCTAAAGCCTTTGCAATGTTCTACGAGGTACTATATGATCTTGCTCCTCAATGCCTCTCTGACCTCATTTATTGCTCTGTTTTGCTTCCTTGGACACTTCAATTATACTTCTGCTACAGGTTTATGTTATTTACTCTTTCTGAAATGTTCTTACAGATATCCGCATCATGCTTCTTCATGGTCTTTACTCAAATATCACCTCATCAGTGAGGTCTCCTTGGTCATTCAACCTAACCTCACTCCTCCACCATCTCCTAATCCTGCTCTCCTGCTTTATTTTCCCCCATTGTTCTCATCTCCAGCTGAATATGTTCAGTTGTTTATTGCTGTATTTTTTCCCCCATGGATGTATCACCAACTGACTACTCCCTCTCTCATTAAAACATGCTCCAGGAGATCTGGGCCTTTGTTTTGTTCACTACTATATACTTAAGAGTCAAGGTCAGGGTCTGGCACATGATAAGACCCTCAATACATATTTATGGAATCAGTAAGTTCTTCAGCATTCAAAATCAGACACTTTTTTAAAAAGTACATCTACTCCATCTTACCAGAAGCAGAAGTCCAATTCAGTACTACTGAACACCCTACTAGATACTACCCAAAATATCCCACTAGTACATGCATTTCAGCTTTGAATGTTATCTGTCTAAACTCATTTTTTACTTTCACCCATCACATCTTGTAAAGTAGTGTATTAGTTGGACCTACTGCCCTCTAATTGAATGGACTTTCTAATCCTGTACAGTAGCCGTGGAAAGCATACTAAAAAGAGAGTTGAACAACTTGGGTTTGTGTTTCTACCATTTGCTAGGTGCTTTGTCTTGAAGAATTCATTTAACTACTCTATGAATTAGATTCTTCTTCTGTGAAATAGTGATATCTTTATCTCCCTCCCCAGGGATATCATGTGAGGTTAAAGTGTAACAACATACATGGAAGCATAATGTCTTTGGAACATAGTAGATGTTTAATAAATGCTTATGGAATCTGATGTCTTCAGAGCA EMBV3_00737 GTCCAACACGGCCATCAAGGGGTCGGACAGTGTATACCTTGTGGTCTTATCCCGATCTTC Variant GeneID:511844|LGTN:NM_001035104:55_cdna 126^316 3 EMBV3_43015 GeneID:511844 16 GENE LGTN MGC137442 ligatin EMBV3_33948 CACCGTCTGCCAGATGCCTAATGACAAGCCGGGCTCATGCCCTAATGTGGATATCGCCTT Gene GeneID:618044|WFDC2:NM_001076490:1339_cdna Constitutive 0 NULL GeneID:618044 13 GENE WFDC2 MGC127126 WAP four-disulfide core domain 2 EMBV3_03074 ACTGACAGCTTTGGGTGGACCAGTGATGAGGAAGATTTCCTAGATCTAACAGTAGCAGTC Variant GeneID:531139|USP40:XM_002686556:41_cdna 535^699 1 EMBV3_09476 GeneID:531139 3 GENE USP40 NULL ubiquitin specific peptidase 40 EMBV3_27850 CATGACTGGTGTGACCACGGCAGGAACCGCTGCCATATGTCTTGCTCTGCTTTACTGAAT Gene GeneID:523887|LYZL4:NM_001077959:128_cdna Constitutive 0 NULL GeneID:523887 22 GENE LYZL4 NULL lysozyme-like 4 EMBV3_11812 CACCTTGGCACCACTGTCTGGGATTGCTACAGCCATTCTTGTGTTAGTTACTATGGGACG Gene GeneID:404152|ATP6V1D:NM_001075141:47_cdna UTR3_Alt 3 NULL GeneID:404152 10 GENE ATP6V1D VATD ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D EMBV3_06009 ACTCTGACACTACCCCGTGCCAAGAGGAATGGATGAGCCTGCAATTTGGTTCAAGAAACC Gene GeneID:767991|RNF24:NM_001077052:1372_cdna Constitutive 1 NULL GeneID:767991 13 GENE RNF24 MGC134203 ring finger protein 24 EMBV3_14724 AAGCCTTGAAGTAGCAGAGAACGTCACCCTGTCCCCATCTCCATGACCTACTGGAAGTGT Gene BVV0102_255106 + 0 NULL GK000004.2:18062250-18821643 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183322 TCONS_00183320 TCONS_00183321 TCONS_00183323 TCONS_00183316 1 XLOC_111129 NonCoding TCONS_00183323 XLOC_111129 NonCoding NonCoding - 4:18627468-18734751 - TSS136834 454 1 TCONS_00183323_1 60 0.383259911894273 2 0.99578680486941 5.77271161346787e-08 0.000328197310611749 1.68672873332925e-06 3.15491275007209e-36 0.000249164694119756 2.84052950614753e-07 1.03154768660025e-45 0.000239290483758866 1.11630776372695e-05 1.29304846676341e-38 0 0 0 0 7.80737083646502e-05 0 0 0 0.00026173680405251 0.000606089364615481 6.64489057402615e-10 0 0 0 0.00105226205007623 0.000233315937422722 0.000991614391382856 0 0 0 XR_232714.1 LOC101907655 PREDICTED: Bos taurus uncharacterized LOC101907655 (LOC101907655), 5e-20 102 70.66 0.52863436123348 0 noncoding AGCCCGTGAGCGTGGAGGTTAGAGGTGCTGCTCTGCCAGTAATGAGCTCCCAGTGGTCCTTGTGGCAGAGAGAGCAGTGAGAAGTAGATCAGGGGCTCTCTGGCCAGCCACTGAGCTGGGAGACCTGGAGACAGGCTGAAGGCTTTGACCCACATTGCTCCAGAGCCTTTTCTGGGAGCACCCCCTGGCCAAGCCCAAGCCTTGAAGTAGCAGAGAACGTCACCCCGTTCCCATCTCCATGACCTACTGGAAGTGTCTGTCTCTATGGGTTGCAGTTCAGGGAGGCCTCAGCAACTGGAGTACAGGGACACTGCTATTAAACTAACAGCTTTAACCAGCATTGGTCTCACTGTTCCAAGTTTCAGAAGATTGCTATGGATGAGATTAGTTATCTGCCCTGAGGAGGTGCCCAGAGGTCAGGGATTTCATATGGAGAATTTTAGTTAACATTCAG TCONS_00183324 TCONS_00183325 TCONS_00183326 TCONS_00183327 s 3' 345918 TCONS_00183324 TCONS_00183325 TCONS_00183326 TCONS_00183327 s 3' 238668 EMBV3_01886 CTCATGCTCACCATAGCCCTGCTGGAGGAGCAGTTGTGGCCCCTTGTCTCTGATGACTGA Gene GeneID:511782|SLC39A5:XM_002687581:645_cdna Constitutive 1 NULL GeneID:511782 5 GENE SLC39A5 MGC127070 solute carrier family 39 (metal ion transporter), member 5 EMBV3_34959 CTGGACCTCAGAATAATCTGCTTTCAAAGCAGTAAACTAGTAATACAGATAAGGCATTCC Gene BVT0102_002179 + 0 NULL GK000010.2:69935077-70012192 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00021976 1 XLOC_012649 NonCoding TCONS_00021976 XLOC_012649 NonCoding NonCoding - 10:69939698-69940273 - TSS15866 575 1 0 0 0 0 0 0 0 0 0 8.23317728300117e-05 0 0 6.84042359125255e-05 4.99004763195592e-06 0.000556298209106552 0 0.000734932428391096 0 8.72728057077586e-05 0 0 0 0.00036135529883779 0 2.91558809812635e-05 3.61484619781042e-05 0 1.01898237856515e-05 0 0.000109756103392758 0 0 noncoding 0 0 0 0 ATTAACATGTCAGGAAGAAGAATATTCGAAGTCAAATATTCAAATATCTTGATCTAACCACACTTAGTAGTAATGAAGAGAAGCAGAAAATGAGTATTGCCAAAGAAACTCGTGAGGTTACTTTTATAAAATGGTTAAAACTAGTATGAGTTGAAAGTTTCTCAACCATTATTATCAACAGCTGTTTTATGGATATGATAACATTATTGTCTATATATAGCTTGGAGCAGTGGAATGCCTTATCTGTATTACTAGTTTACTGCTTTGAAAGCAGATTATTCTGAGGTCCAGATTGACTTTTCTCAGGCCTTGGCCAATCTGTGTAATTGATGGCAGTATAGTGTTTAATATTTGATGCACAGCATTTATAGATGGACAGATGCTCTGGAATGGAAACCACCTGCTAAATTGTTTTTCCGGTAGGACATGTGAAAATTTGTATATCTTAATATTCCATTAAACATTTAAAATGAAGCTATGTTTTGTTTAAATGTCTTCTTTTTAAATGATGGTTTCTGTAGGAAAAAAACATTGTTTAGTTAACACACTACTAATAAATAAAAATGAAAACTCTT TCONS_00014520 TCONS_00014521 TCONS_00014522 TCONS_00014523 TCONS_00014518 TCONS_00014519 . 3' 505 TCONS_00014520 TCONS_00014521 TCONS_00014522 TCONS_00014523 TCONS_00014518 TCONS_00014519 . 3' 1079 EMBV3_09225 TTCTTAACATACTCTCTCCCCCCTTCACACACTCCTGCTGAAAGATACTCGTCCAAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24219 TGAGGGTGAATCACATTGTTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACC Gene GeneID:100337178|LOC100337178:XM_002686221:204_cdna Constitutive 0 NULL GeneID:100337178 3 GENE LOC100337178 NULL polypyrimidine tract binding protein 2-like EMBV3_31547 ATGAAACCTGTTTGGGTGGGGGTCTGGGGGTTGCACAGAGAATGAGTTCTTGTATTCGTG Gene GeneID:537459|RIN2:NM_001102204:70_cdna Constitutive 0 NULL GeneID:537459 13 GENE RIN2 MGC152020 Ras and Rab interactor 2 EMBV3_36484 TCCTGGAGGAATCAGGCCTCGCATGCTGATAACAATCCTGGGTACAGTAAAGCCCAATGC Gene GeneID:786492|LGALS3:NM_001102341:143_cdna Constitutive 1 NULL GeneID:786492 10 GENE LGALS3 MGC148757 lectin, galactoside-binding, soluble, 3 EMBV3_24096 AAGGCTCCCGTGCATCTCATTTATGCCGTGTTCTTTGTGCCTCAACGGTGCCCAGAACGT Gene GeneID:100139148|LOC100139148:XM_002691987:5_cdna UTR3_Alt 2 NULL GeneID:100139148 12 GENE LOC100139148 NULL hypothetical protein LOC100139148 EMBV3_04814 ACCCAACACAGATGGGTCATGGTGGAGAGTTCTGACAAAATATGGTCCACTGGAGAGGGA Gene BVV0102_154185 + 1 EMBV3_18955 GK000008.2:60823631-60849477 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23840 TGGACCCTAAAACAGCTCATCCCTATCTGGTCTTGTCCGAGGATCTAAGGAGTGTGAGAC Gene GeneID:520201|TRIML2:XM_002698678:180_cdna Constitutive 1 NULL GeneID:520201 27 GENE TRIML2 NULL tripartite motif family-like 2 EMBV3_05637 ACTCACGATCCAAGATACCGGGAGTGGGGCTGGGAAGCAGCACTGGCTATTGAAAAGTAT Gene GeneID:532645|MAN1A2:XM_002686098:89_cdna Constitutive 0 NULL GeneID:532645 3 GENE MAN1A2 NULL mannosidase, alpha, class 1A, member 2 EMBV3_03369 AGCGTACGGTGAAGGACACAGGCCGTGGAGTTTGAACCCCTTGAAAGATTGAAATCATGG Gene GeneID:767982|USMG5:NM_001113318:258_cdna Constitutive 0 NULL GeneID:767982 26 GENE USMG5 AGP DAPIT MGC128614 up-regulated during skeletal muscle growth 5 homolog (mouse) EMBV3_24460 CCCTGCTTAGGGGCGGGATGTCGCTCCGAGGTCGGGGTATGATAGGTCGGGGAAGAGGGG Variant GeneID:616638|C3H1orf77:NM_001035481:227_cdna 647^784 1 EMBV3_02034 GeneID:616638 3 GENE C3H1orf77 C1orf77 MGC127628 chromosome 1 open reading frame 77 ortholog EMBV3_11203 ACGAGGTGGTCATCTAACAGGACATGACAGAATTATAACGATGTGTTGGCAGTTATTAAC Gene BVV0102_346816 - 1 EMBV3_02930 GK000025.2:36335484-36347293 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05036 CACGCAGGTACATTCATTTCCTTTGTGTAGAGTAGGGACGTTTTTCACCTCGCTGCCCCA Gene GeneID:516021|SLC5A6:NM_001046219:135_cdna Constitutive 0 NULL GeneID:516021 11 GENE SLC5A6 MGC127172 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 EMBV3_12079 GGAAGGCTGAAGACTCTTGCCCTAGTCCTTGTCGAATCTGCCAAGACCCTGGAGAAGCTA Gene GeneID:538490|RASSF7:NM_001076105:7_cdna Constitutive 0 NULL GeneID:538490 29 GENE RASSF7 MGC139145 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 EMBV3_16054 TGTTGATTCGTGAGGTGGTTGAGAGAAGACTGAATCTCTATGAGCAGAAGGAGGGCAGGC Gene GeneID:533135|RSPH3:NM_001109799:5_cdna Constitutive 0 NULL GeneID:533135 9 GENE RSPH3 NULL radial spoke 3 homolog (Chlamydomonas) EMBV3_25116 GAGATCTGAAAGATGAGAAGGAATTGGGGAGATGGCATTTCAGGCAGAAGGAACAGTAAG Gene BVV0101_007239 + 0 NULL GK000003.2:28016006-28124614 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27002 TCTGTGCCATGGGAAGGAGGTAAGAGGACAACAAGGGTGTGAGCACTAGGATCATAAAGC Gene BVT0102_022051 + 0 NULL GK000004.2:1-120829699 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00107070 1 XLOC_062979 NonCoding TCONS_00107070 XLOC_062979 NonCoding NonCoding - 2:136939983-136941014 - TSS78688 1031 2 TCONS_00107070_3 115 1 0 6.7167120192386e-05 5.24456845280513e-10 0.000161559369180144 0.000217948314362984 0.00107864790496499 0.000762994180708038 0.000378784311425908 0.000668037745567382 0.0020573101899855 0.000433037980895606 1.16591772409988e-05 7.91318271697114e-05 0.000695026773521294 0.00209150428650635 0.00109696049544672 0 0 1.3098243881105e-09 0 4.15484996221562e-10 7.36112522658575e-07 1.7689648191155e-05 6.84439345255088e-10 1.73064831575579e-05 7.49171662358366e-06 0.000125624415275095 0.000124145984875824 7.49185642027594e-05 2.50327413612902e-05 1.31205744706707e-05 XM_005200400.1 LOC101908506 PREDICTED: Bos taurus ubiquitin carboxyl-terminal hydrolase 17-like protein 22-like (LOC101908506), mRNA. 0.0 1831 99.52 0.999030067895247 0 noncoding 1 1 1 1 0.0325370906486804 0.768901115935124 -0.0747392039785758 0.197327309580397 CTGAAAGCAAAGGTCCTCCCGCACTGAGGAACGACCCGAGCCTACCCTAGATTGTGATAGCAAGACAACTGGACTTCCGACTCTGCCCGTCCTGTCTGGCAGTCTCATCCAGCTGGGCCCCGGGCAAACGCCTCTGGACGCGAGGAGATGCGGCCGGCCTCCAAAGTGCCTGGGGCGGTGGGGAAGCTGTCCTCCCCTAGCTGCTTTCGCGACTGCCTCATGGGCCCGTGACCCGCTGGAGGGGCATAGAGGCCCTTATCGACCACCTCTTGCGTTTTTCTTTCTTTGGCTTGGCTGATGGCTTCAAACCCCAAACCCTCCATCAAACGGCAGACCGGGAATTTGCGATGTAACATCTCCGACCTCGAGGGCCAACGCTGGCTCCTGACTGCGCGAGTCGGCGTGGCAAGGAACAGAGAGCGTTCCGATGGCTTGTTTCCCCCGCATGGCTACCTACGCCGCACCATGCCCTCCGCACGTAGAGAGGACAAAGAATGATGAGCAGTATCTTCCCCCGAGAACACGAACAAGCGTGCCCTGCACGAGGAAGCGGAGCCACCCACGGTCCGCCCTCATCATCACCACGCATCTTCCTCCGCCCCATCGTCTCAAATGGACTTACTGCTTGCCCCATCCACACCCTCTGAAGAAGGAGGAGGAGGAGGAAGAGGAGGAGAAGAAGAAGAATGTCGATTGGGGTGGCGTGACAGAGGGAATGGGAAGGTGGCCTTATGCTGGGCGAAATCCGTGCAAAAGAGAGAAAAATCCTGGCTGATCTCGCTTCTCTGTGCCATGGGAAGGAGGTAAGAGGACAGCAAGGGTGTGAGCACTTGGATCATAAAGCACAAAGCGGTAGGCTCCTAGGATGGGATGGGGGGAGCGGGAGGTGGGAGGGGTGCAATAGGCTAAGGAAGAAAACGGGGTCAGGGCCCTTCTTTCCTAGTAAGGACCAACGGAATCAACACTCCAGCTATGGTAAACCTGTGGACGGTCAAACCCCCATAGTCCTGGAAGGCGAGCATAATGTCCAG TCONS_00104286 r 5' 47976 TCONS_00104286 r 5' 47976 EMBV3_37352 CCCGGGGCCCAATCCTCTTCGTTGTAGGAGAGGCTGACGAATGCTTCAATAGCAAAGAAT Gene GeneID:530653|LOC530653:XM_002689870:4_cdna Constitutive 0 NULL GeneID:530653 8 GENE LOC530653 NULL similar to bile acid Coenzyme A: amino acid N-acyltransferase EMBV3_14808 TCAGAAGCCCACAGGCTCCAAGAGCTGCTTGCAGAAGCTTACGGATTTTGTGCGGTCCAC Gene GeneID:518403|ANKRD33B:XM_002696433:55_cdna Constitutive 0 NULL GeneID:518403 20 GENE ANKRD33B NULL ankyrin repeat domain 33B EMBV3_06385 ATGATGCGTCAGAAGGAACAAGAGCACATGATAAACTGGGTGGAGAAGCGTGTGGTGCAG Gene GeneID:282701|ATP5F1:NM_001038501:35_cdna Constitutive 1 NULL GeneID:282701 3 GENE ATP5F1 MGC134131 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 EMBV3_31506 AGGAACTTGGCTCATTGTGGGAACCTAGCCTGTTTTGGGGGGTAGGAACCACAGTTGTCT Gene GeneID:515389|MTA2:NM_001075712:88_cdna Constitutive 0 NULL GeneID:515389 29 GENE MTA2 NULL metastasis associated 1 family, member 2 EMBV3_04079 GGGGTCAGAGGCACCCTCATTCACTGCTGGTTCTAACACAAACTTGTACATCCCTTACAG Gene BVT0102_110160 - 0 NULL GK000018.2:14789109-14792458 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082408 TCONS_00082405 TCONS_00082409 TCONS_00082406 1 XLOC_051001 Coding TCONS_00082408 XLOC_051001 Coding Coding DEF8 18:14785212-14794651 j TSS62162 7371 7 TCONS_00082408_10 125 0.355040021706688 4 0.219432083068447 0.000657646484523635 0.000174276965911204 0.000344663213663288 0.000165300005314323 0.000656458606565569 1.50841996121481e-07 0.000222456113845484 0.000571841773013251 0.00071358584741192 9.99475320955474e-08 1.18739675303003e-08 2.54977474282248e-09 8.53344739551021e-10 4.67628690979328e-05 0.000190336165871179 1.77401723268233e-07 1.30727583426866e-138 1.29072727485999e-07 0.000597229331451556 2.9420717004479e-266 4.67356128583208e-05 8.98007830189882e-16 8.91639367082347e-05 1.70329268090078e-06 0.000378584089552128 5.67303783304252e-09 0.000437377101150707 7.75974132038726e-05 9.00208792514148e-09 2.3681265805037e-08 XM_005192683.1 LOC101904456 PREDICTED: Bos taurus tigger transposable element-derived protein 1-like (LOC101904456), mRNA. 0.0 7101 100.00 0.533984533984534 NM_145039.3 CENPBD1 Homo sapiens CENPB DNA-binding domains containing 1 (CENPBD1), 0.0 998 79.67 0.155609822276489 TCONS_00082408_1 sp|A5PJM7|DEFI8_BOVIN DEFI8_BOVIN Differentially expressed in FDCP 8 homolog; 1e-70 221 100.00 0.990476190476191 1 coding 0 0 1 0 -1.87569325218362 0.00451129818626626 -0.00301871031629918 0.958067226535147 CCCTGCAGCTCCAGGACCGGCAGCACTTTGTGGAGAACGATGAGATGTACTCGGTGCAGGACCTGCTGGACACGCACACGGGCCGGCTGGGCTGCTCACTGGCTGAGACCCACACGCTGTTTGCCAAGCACATCAAACTGGACTGTGAGCGGTGCCAGGCCAAGGGCTTTGTGTGCGAGCTCTGCCGGGAGGGAGATGTGCTATTCCCCTTCGACAGCCACACATCCGTGTGCGCCGACTGCTCTGCTGTCTTCCACAGGGACTGCTACTACGACAATTCCACCACATGCCCTAGGTGTGCGCGCCTCACCCTGCGGAAGCAGTCGCTCTTCCGGGAGCCTGGTCCAGACCTGGACGCCTGAGCGATGGAAGCCCTTCTAGGCCTGTCTGTCCTGCTGGCCGTTGCCACAGTCAAGGTGTTTCCTATACTCTGGAGACCTAGGGTCTAGCCCCTGGACCCCCCGACTGCTGAGCCAGCACCACCAGGACCACCGTCCCCCAGTGCGTGTTGGGGCTTGGGGCGTCTGTTTTTTGGGTGGGCTGCTGTGAGGGCCAGGACGTGTACCCTTCCTCCACTGCAGAGCTTTGAGGGTCAGGTGTGGGGAGCATCCCTCACCTCCCCTTTGGTCAAGAGCCCCCCACCCTACCCTGCCCACCTTGGGACCAAGGCTACTGGGCCCTGGCTACACTGGAAATCCTGGAAGCCTTCCAGGGAGTGCCGACAAGACTGAGGATGCAGTCTTAGCCTGACTTTTACCTGTGGTGGACGGTATGGGTTCTACTTGGAGGCCCCTCCCCCAGCCCCTTGCCTCTTTGAGGTCCCCTGGTTGTCCCTGGCTGGGGCTGTGTTCATCCCTGTCTCCCGAGGGCCCTGCCCCTGCCCCCCGGGTTCTCTGGGGCCTTCGCCAGCAGGACCATTCCAGCGGCTACTGGCTGCTGTGGAGATCTCACCTCCTACCGCCCCTGCCTTGGCCCAGCCCAGCTCACTCTGGTGCTTCATGCTGGGTGGCTGAGGGGGTCCCACCCAGCGAGGAAGTGCGCTTCCAGGTATTGGGCAGGACTGTGCCCCTGGCAGGTCAAGGTTAGGTGAGAGGGCTAGGGGACAGTAGACCTGGCCCAAGTGTGCCTATGGAGGGCTCCGGATCACTCGGAGACCCCCCCAACCGGGGCCTTCTGTTTGGGGAACTGAGATCAGGCACTGGAAATACTTGCTCAGGGGAGCACCAGGCAGGACTCATGGGGTGTGGGAGGTCCTGCCACCAGCGGCAAAGGGAGCCGGGCATGGAGGACTGACCCAGTGGGGAAGATGCATTTGTGGGAACCATCCAGGGGAAGGCTGCCCTAGCCTTGCTGGCCTTCTCCTTGCCCTGGACTGTGCTTGGCTGTTGACACCTGGGGTGGCTGGTGGGCAGGAGGCAGTCACCTGGACATCCATCACCTTTGACTGGGAAGTGCAAGGAGAGGCTTGGCCCACAGGGAGGCTGGCTGAGCCAATGTGGGGGGTGGGTAAGGACAGTGCCAACCCCTCCTTGCCCCTCTGCACCCCAGGGAAGCCCTGCCCAGGGACTTTAGGCCACCCTCCGACTGTGCTGGGCTGTTCAGAGTGTCAGTGTGGGGGTTGGTCCACATGGGGCCACCCTGCTTCCCGTTCTTGGGTCTAGGGGGTTAAAGGCTAAGCGCCCTCTTCCTACACCTCACATCTATACGTCTCACTGCGGCATCGCATTTCTGTCCCAGGGATCCTGGCTTCTTCCAAATGGACTCTGTAATCAGCACTGTGTTATTCCAGTTACAGTCACTGTGTCCGTAAGAAATGTCAGTAGCCATTTGTTGGGCAAAGTTGACTCTTTTTTTAAAACTTCCTCTCACATCACGTCTTCTCCTCCTCCCCCTTCTGGGTGACAGATTCTTTAAACAGAATCATGTGTAGGTCTTTCTGAGACCACGTCACAGTAGCCAGAACCCAGAGGAACCAGTTAGTATGGCCAGGCCTCCCAGGAGAGCCGTATGGGCTGGGTGCTGGGGATAGGGCGGGGTTTGCTGCAGGGTTAGTCAGAGCCCACAGGCCCCTCCCACAGGGTCAGGTGTAAATGGGGCACCTGACCTTGGCCTCAGTGTGCTGACACCTCCTCTGTAGGCTGCACTAAAGCACCCTCTGGGGTTGTTTGGGTTCCAGGAAGTGCTGAGCCCAGTCTGGCTCTGTAACAGAACCTACGTCCTCTCTCCTGAGTCCTCCCAGAGGGAAGACTGTCACGTTAACTCAATGCAGGCAGTGCCGGTCCCAGGTCTAGCTCCCAGAAGCACTTCTGGTCTTCAAGTTTGACTCACTGAAAGGGCCCTTGGAGCTCAGGAGAACCCAAGACCCCCTCCCAAATGACATTCCAACCTCTGTGTATGTACATTTCTCTCTGGAGATACGACCTCTGGTTTTGAGGATGATCTCAAAGAAACATCAGGAGTGTGCGGCAAAGGGGTGGGGGAAGGGTGTGTGTGGGCTGTCTGTGGGCCCACGCTAGCACCTCCACTTCAAACAACTAAAGCCACACTTTGTGTCAGAGGGAGCATGCGGTCTCCACCCACCCACTTCAGGTACGAGGATGAGTTTTTCTTAAACTTTTAACAGCTGTAGGTTTACAGAAGTGCTGCAAACACATTCCCAGGTACCCATCTCCTGGATTCCGTGAATGTTAACATTTTCCCCATTTGCCTTACTCTTTCTCCACACACTTTCTTTTGAACCATCTGGTGGAAGTTGCAGATGGTGCCCCTTTGCCTCTAAGTGCTCCTGTGTTACCCCAGCAAGGATATGCCTCCCACAGCTATGGTGTGGCCATGACATCAGGATGCTCACGTGGATGCCGGCCGTAAAGCCTACAGCAAGCCGTGTTCAAATTCAGCCACTTAGTTGCCATGTCATTTTAGCCTTTAATCTGGAAGGGTTCAGGACTCTGACACAGAAAATCACAGACAAATTATTCTGAAGACTTTCCTTCAGTGTGGGTTTTTCTGACTGGACTCGGGCTTTGCCCTTTTGGTGGGATTTTCCACCCACCAAAGTGGTGGGTGGGTCCAATTTGTCATCTATCCTGCTCAAAACGCTCTGGTCCACTTGGCCCAGCTGACTGACATCTTCCTGGCACTCTTTAGGCACTTTCTTACTTTCCAGCACAGGAAAGTGTTCCAGGCTTAGTTAGTAATTGCCCCAGTCCCAGCCCTGACACCAGTCATCTCTCCAAGGAGCCCTGGGACCTTCTGGTGGAGGACGGATGTGATAGTTGGGTGTGCTCACTTTTGGGCTGATCACTGCCCAGAGGTCCTTTCAGTAGTGTGGAAATAGTACTCCTTATCTATTTCTTTTTTGGTCTATAAACATTAAAAACCATGAGTTCACAGTGAAACTTCCAATTTCAAAACAACACAAGTCATTCTTTCCCTTTTTCATGTTTATTATTTCCTTGCTCGACAGTGAGAAAGCTGGCTCCCTTATCCAGAATACACTTATTTGCTCAGTCCGACAGTACACAGAAAGCACCTTTGGGACTGCTCACTTACGCTGGTGAGAAACAAGGCTACTCACGAGCCTTTAATATTTGTCTATAGCCCGAGGGCATACAGTCAAAAAGTACTTGCTTTTGCTTCTTCATTGTGGGTGTGCAGTTCCTGTGAAATACGGTTCCGTTCAGGTAGTCCACTGCTTTACTTCCCCATCCTTGTTTACTTTTGTTTGTACAGTATATTAACATGGTCCCCAAAGTCAGAACTTCATAAAAGGTACAAAAGTTATATCTCCTCCCACCTCTGGAACCAATCTCTTTAGTCTGATTTCTCCCACCTTTGTTTCTTATTGTACAAATGAGTATGATGTATGCATATTTTCTTATTCCCTGTCTTTCTTCCACAAAAGGTAGCATACTCTACTCCTGATGTTGCTTTTTTTCTATTAATAATATATCCTGGAAACCACTCCACATCAGTTGAGTTCTTCCTTGTTCTCTTATTATTGTAGTTATCATCACTTACAACTGTCTAACTCTCCGTTGTGTACAAGCGCCATTTCATATTTGACTTTTTACATGAGACTCTTCAGGCTATTTCCTAGGTTTTGAAGTTACAAACAAGGCTGCAACAAAATCCATGCATCTGTATTTTCTTTTGTTGGAAGTGTATCCTCCTAAAAGTGGGATTGTTAAATCAAAATAAATATATTTTGTATTAGTGCTTGATATTCTTCTGTAAGGGATGTACAAGTTTGTGTTAGAACCAGCAGTGAATGAGGGTGCCTCTGACCCCACAGCCTAACCAGTGGAGTATGTAGCCATACTTTTGATTATTGCTGATCTGAATAATGAGAAATGGTATGAGTGTTGTTTCATCTGCACTTCTCTTATGTTTGAAGCACTAATTTACCTGCTTATGAATTATATCTTTTGCCTACTTTTCCATGGGGTTTTTGGTATTTTCTTCTCAATATTTATGAGTTCTTCACATATCAGAGATATTAACTCATTATCTGTGAGAAATTTTCTTCCAGTGTATCATTTGCCTTTGACTCTGTTTGTCCTCTTTTATCCTCTTGGAAAAGTTTTATTACATTTTCATATCATCAAATTGATTAATCTTAAATTTCACCTGGACTTTGAGTTACAGAAGATCTTTCTGACCACCCATGGGGAAGAGGCATATATCCGTGGGTTGTGTAGCACTTGTATTGTTTCAGCTTTTAGATTCAAATCCCTCATCTGTTTATTTCTGTGTATGCTGTGAGGTGTGAACTAATTAGCTTTTGCCAAATTTTATCTAGCTGTCCTGCACTATTAAAAAAAAAAACAACCTATCTGTATCTACTTCTGGACTTTCTATTGTATTCTACACGTTTGAGTACCTCCTTGATTCAATCAGAGGTTTTATAGTGTGTTTCAATGTCTAGCAGGGCTGGTCTCATCGTGTGTTTTAAATAACTTTTCCTGGATTTTTCTTTCAATCTTCTTAAAGCACATATTTAAGCACAATTTCAGTAACAAGATGTGATGTTCTTTAGTGTCAAAATGAATGTACCAGAAGCAGGGTTTCCAAGGATGTTAAACATCTGGAGGCCAAGACTTGGCCAGGCGTCACCCAGGAGGTTGCCCTGTTGTGTCTGGTCTTCCTGCCGTGGAGTGTGTTGTGCACTGAGGTCACCTAGGAGAGCTGTTTGGAGCACCGCTCTTTCTCACTGTACAGCTCCCTGTAGCAGCTTATTGCATCATTGATTTCTCTTGAAACTTGCAGTTTCCACGCAGCATCAGGGCTGTTACTGGTAAGGACCTGCAAGCCAGCCTCAAAATGTGAGAAGGCTGCTGACAGCTCCCGTGTGGTTAGTTGGCGCAGGGCAGGGGCAGCCTCTTCACCCTCCTCTTCCTCTCCTGCGGGCTCCTGCTCCAGCTGCATCAGCTCCTCATTTGAGAGACCCTCCTCATGGGACTGCAGCAGCTGGTCCACATCAGCTTCTCCCACCTCTCCAACAGCCACACTCTTGGCAAGGATCACAATATTTTGTTGAAGCTGTGCAATGCCATCTGTTTGGGAAGCACTCTGGAACTGAACACACTCAGGCCAAATCTTCTTCCACACACTGTTCATTGTTGCTGGTCTGAGCTCCCCCCAGGCTACTGCGATGTTGTCCACAGCGTCCACAATGCTGTAGTTTCTCCAGAACTCCCTGATCTCTGCTGTATCCTCCCCATCTGTTGCTTCTAGGATGTGCTCAAAAGTCCTTCTCAGGTAATGAGCTCTGAAGGCAGAGGTTACACCTTGACCCATGGGCTGGATCGAGTCAGCTGTGCTGTCATGAAGATACTCCACTCTTACAGTATCAGACAGATCGTTCAGATTGACTGGGTGGCATGGTGCCTTGTCTAAGATGAGCAGGGCTTTGTTGGTCAGGTTGTTTTGGGCACAGTATTTCTCAATGGCAGGGCAAAAAAAATATGTGAACCATTCATGAAAGATGCTCCTGGTTGCCCAGGCCTTTCTGCTTGAGCGCCAAATCACGGGCAGATTGGGCTTGGAGTACCCCTTCAGAGCCTTGGGGTTTTCTGAGTGGTACACCAATAGGGGTTTCAATTTGAAGTCCCCAGCTGCGTTGCCACCAAGAAGCAGCATCAAGCGATCTTTGGATGATTTAAATCCTGGCTCAGCTCTCTCTTCTACTGAAAGAAACATTCTTTCAGGCATTCTTTTCCAATAAAGACCTGTCTCATCCACATTAAAAACTTGCTGGGGGGTGTACTCACCTTCCTGAATGATGCTCTTCAGTATTTCTGGATATTCATCCTTCTTGGCAGGAGCTGAGATGTTCATTTTGAAGTGGGGCAAACAGTGGCGTTCCTTGAATCTCACAAACCACCCTTTACTTGCAGTAAACTTTTCTGTTTGAGAGCTTTCACCTTGCTCACGCTGTAAGTCATCAAACAAACTCTTGGCCTTCTTCTGAATAACGGTGACACTCAGGGGCACGTTTCGCTGGCTCTCGTCTTCAAGCCACACGCACAACAACCGCTCCATGGTCTCCATGACTGCACTTCGGCGGCGAGTCAACCGGGAGGCTCTCAAAGGAGTGGCTATTTGTGAACTCGCTTTGATTTTGTCTTTATTATCTCTGATGGTTGCCACCGTAGAGGCAGCAAGGCCTAAGGCCTTTGCGATCTGGCTGAGCTTCTCACCCACTTCAAAACGTCTTAACACTTCTAACTTCACGTCGAGAGTGATTGCTTTCCTTTCCCTTTTGGCACTCCGGATGACTGCGGCGTTTAGGGACCTTTTCCCAGTCATCTTTGCCGCCGGTGTGTACTAACCACAGCAGTCTCAGGGGCGAGAAAGCCTGTGGTTACTCCATGCCCTTCGCAGAATTTGGGGAAGAGAAACTGGGGCTTCCCGGAGGCGCAGGATGACTACACCGGGGACGTGACCGGCTCAGCACAGGCCGGCCCACGATACAGCCCAGGACAGGGCCGGTTCCTTCTGGGTTCCAGGGAGTCAATCAGAGCGGCCTAATCCCTGGACAGCAGGACTGGGTTTCCCTGAAGCAGAAACAAAGCTCCGTGAGGGGCGGTAATACCGCACAGCACACGCCGCCCGGGATCTTCGGTTCCTCGGGAACCGGTTCCCAGCGCTGTACCTGGACCACAAGGAGTCGGCGGACAGGCGGGGTGGTGTACGCCGCTTCCCAAGGAGGACTCCAGATTTAAAGTAAGTCTAAAGGATGTCTCCTCAGCACCTTGCCCGCGTCTGCCACCGTAGTGCAGGTGGCGCAAACGTTCAGATCCGAGTCAGGTCCGACAGTAGACACCTGAGGCAAGGTCCCCACCTAGGCGCCTTGGCCTCACCGCGCAT EMBV3_34500 ATCAGCAAACCTGTCTGTCCTGATGGCAAAAATGAAAGCTGTGTGGCCCTAGAAGTGGGC Gene BVT0102_036449 + 0 NULL GK000008.2:63269864-63271134 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227921 TCONS_00227920 1 XLOC_138369 Coding TCONS_00227921 XLOC_138369 Coding Coding TSTD2 8:63270040-63297745 = TSS170055 2773 1 TCONS_00227921_3 513 0.139199423007573 10 0.90026710944268 0.000168027793329204 0.000129389718441134 4.09371425948662e-05 3.36244638844778e-05 4.34106539775435e-05 8.5904436869363e-05 0.00010773768294185 0.000254098681304222 9.39625510263397e-05 9.86580650424874e-06 7.95727977401054e-05 0.000188025451557283 0 2.02311463684707e-35 1.71518102875858e-05 0.00299738414425475 0.0036410788088256 0.005237322482523 0.000194995532206913 5.89467996152319e-05 8.77982580387546e-05 0.00101351171839695 0.00106256810724574 0.000486622406705111 1.59686644613307e-11 0.000929228740163076 0.000915458330285099 3.54927341917026e-05 2.23268316059046e-18 0.00142012732094571 XM_005199242.1 TSTD2 PREDICTED: Bos taurus thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 (TSTD2), transcript variant 0.0 5002 100.00 0.999639379733141 NM_139246.4 TSTD2 Homo sapiens thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 (TSTD2), mRNA. 0.0 2055 81.99 0.763072484673639 TCONS_00227921_3 sp|Q5T7W7|TSTD2_HUMAN TSTD2_HUMAN Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2; 0.0 840 84.22 0.980506822612086 1 coding 0 0 1 1 -0.0381926367895814 0.833709372869065 0.0387578173715279 0.45843336370305 GCTGGGAGTGCGAGGGCTGCGAGCGGTGGCAATTTCTAGGCGGAGACTGCTCGGTGAAGAGAGATCTGAGAAAGGATCAGGACGGGCGGGTGATAGTTAGCAGAAAGGAACCTACCCCACGGCTGGAGCCAAACCAGATGCCTTCTTCCACTTCACCAGACCAAGGAGATGATGACCTGGAGGCCTGTGTTTTAAGGTTTTCAGACCTGGATTTGAAAGACACGAGTCTTATGAATCCCAGTAGCAGTCTCAAAGCAGAGTTAGATGTCAGTGCAAAGAAGAAATACTCATTTGCAAAGAAAAAGGCATTTTCCCTTTTCGTTAAAACTAAAGAAGTTCCAGCACCTCCTTGTGAATGTAAAGAAAAATGGTGGAAATGCTGTCAGCAACTATTTACAGACCCAACCAGCATACACAGACACGTGGCAACACAACATGCTAATGAGATTTGCCATGAGACCGCTTCTGTTTTAAAGCAGCTGGCTGTGACATCGAGCACCTCCAAGAGTCTTGAGTCTACAGACAAAAGGAACCCTTTCAAAGAGGACTTTACCCGTAACCAAGAAGTGTCTACTTGGCTCCCTGATATAAGCTGCTTTAACCCTGATGAGCTGATAAGTGGCCAGGGCAACGATGAAGGGGAGGTGCTACTTTATTACTGCTACTGTGACCTGAAGGATCCCGACTGGGTCTGTGCCTGGCAAACAGCTCTGTGTCAGCACCTGCACCTCACGGGCAAGGTTCGAATTGCTACGGAAGGAATCAATGGGACTGTTGGTGGAAGCAGACTGGCCACCAGACTCTATGTCAGTGTCATGCTTTCCTGCCCACTGTTTAAGGATTACCTGTGTAAGGATGATTTTAAGACCAGCAAAGGAGGAGCTTGCTGTTTTCCAGAATTGCGTGTTGGTGTGTTTGAAGAAATTGTGCCCATGGGGATCAGTCCCAATAAGATCTCCTATAAGAAGCCTGGAATCCATTTATCCCCAGGTGAATTTCATAAAGAAGTAGAAAAGTTTCTGTCTCAGGCAAATCAGGAAGAAAGTGATACTATCCTATTGGACTGCAGAAACTTCTATGAAAGCAAAATAGGACGATTCCAGGGCTGCTTAGCCCCAGACATCAGGAAATTCAGTTATTTCCCTAGCTACGTTGATGAAAATCTAGAACTTTTCAAAGAGAAGAGGGTGCTGATGTATTGCACTGGGGGCATCCGTTGTGAGCGGGGTTCAGCCTACCTGAAAACCAAGGGAGTGTGCAAGGAAGTGTTCCAGCTCAAGGGTGGCATCCACAAGTACCTGGAGGAGTTTCCTGATGGTTTTTACAAAGGGAAGTTGTTTGTTTTCGATGAGCGTTATGCCTTATCCTTCAACAATGACATAGTGTCGGAATGTTCCTACTGTGGCGTCCCCTGGGACCACTATAACCTCTGCTCCACTCCCCAGTGCCGCCAGCTCGTCCTGACCTGCCCTGCCTGCCAAGAACGAGGATTCACAGCCTGTTGTGTCACGTGTCAAGACAAAGGGAACAGACAGGCTGCAAGCCCCGCTCAGAGCAGCTTTAAAGAAGAATGCGAGTGTACAGCCCGACGGCCACGTGTACCGAGGGAGCTCTCACGGCGGGGGCCTCTCACAGCAGGCGCCTCTCCCCTCAAGCCTGGGGCCCAGGCTGGATGTTGATGGGAGCAGCCCCCTCTGTTCCCCCAGGCCTTCACACAGCTAGGTCTGGGGCCGCCATGTATTGGGGAACGTTAGGGCTGCACTAACAGAGAAATGGGGAACTTCAGAGCTGCCAGAGCCACCATGGTCAGCTGGTCACGTTAGCACCTGTCCTCCACAAGAGAAGGGAAGAGGAACTTGGGTGCTCACCTCTTACCACAGACATTCTGGCTCAGAAGGTGCTAGAGCACAGAAAAAGGCGGGCTTTGTGTGATCCCAGAGTTCCTAAGAGAGAGCCTTGAACCTGGTGACCTGCCCTGCCCCTTCTGCACCATGCAGCAGGGCTGGCAGTACTCATTTTTCTTATCAGCAAACCTGTCTGTCCTGATGGCAAAAATGAAAGCTGTGTGGCCCTAGAAGTGGGCTTCTCAGAACTGGGCCTCTTAGGTCAATCTACCATCCACCCCTACCTTCCTCTTTTCCCTGCTAGCCTCAGAGCACTGGACCAGGATCTGCCAACTACAGCGTATGGCCCACCTCTTTCTGTAAATAAAGTTTCACTGGACTAGCCACAGCCATTCACTTACAATGATCTTTGACAGAATTAAGCATTTACAAGAAAGACATTATGGCCTGCAAAGCCTACAGTATTTACATGTGTACCTCGGAGATGCAGATTCAGTTCCAAACCACATCAAAATGAGTTATACGAACTTTTTAGTTTCTTAGTATATGTAAAAGGTATGCTTACATTATGCTGTAGGCTATTAATTGTACAATAGCATTGTGTCTAAAGAAACAATGTATATCACCTAATTAAAATTTTGTATTGCTAAAAAATGCTATCATCTGACAATGTGGGGTTGTCAAAAACCTTTAATTTGTAAAAACCGAAATATCTGTGAAGCACAGTAAAGCAAGGTATGCCTGAACTATCTGGCCCTTTACAGACAAAAAAAAAAAAAAACCTTGCCACCTCTAGTCTAGATGAACAGCTCATCTGGTGGAGGAGATAGTCTTAAAGATGTGGCTGTCTTCACTTTTTATGGATTTCTTTTGTGAGAGATTTCCCTGTAATAGTTTCTGCTTGGCTCAACACCCACCCTACTAGCTCT EMBV3_02853 AAGGAAGTCAGTCCCTGGCCAACAAACAGATGAGTGAGCTTAGGAAGAGACGTCCCCAGC Gene BVV0102_263941 - 0 NULL GK000002.2:130903928-131304417 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35052 TCAGAGCGAAGCCAACCTCCTGGGCCATTTCGAGTGCTTGGTGTGCTTAGAGATGTCTGA Gene GeneID:100297757|LOC100297757:XM_002685383:318_cdna Constitutive 0 NULL GeneID:100297757 2 GENE LOC100297757 NULL similar to zinc finger protein 313 EMBV3_21636 ACGTGTGTTTTAAAGTGGGCCGTGTTGTTCAGGCGACGTATCATGGGGGTGTGCTGCAAA Gene GeneID:617052|ZDHHC7:XM_002694749:145_cdna Constitutive 0 NULL GeneID:617052 18 GENE ZDHHC7 NULL zinc finger, DHHC-type containing 7 EMBV3_38451 CCAGACGTGTTCAGATGGTTTGGGGAGGCCTGCTTCACTAGAATGAGAAGCCTGGGTTTA Gene BVT0102_039395 + 0 NULL GK000018.2:57653296-57680395 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087386 TCONS_00084385 TCONS_00084380 TCONS_00084382 2 XLOC_052457 XLOC_051548 Coding TCONS_00084380 XLOC_051548 Coding Coding - 18:57656172-57683001 - TSS63215 4282 1 TCONS_00084380_8 469 4 0.840539734605636 0.0405501094178628 0.0281793251776275 0.0418107834461481 0.0173855122552235 0.0226084073643376 0.0033422009340258 0.0210385378770376 0 0 0.00156778954316369 4.26282572383648e-07 0.000577195102910093 0.00449514379565615 0.0152713683239324 0.00584679555410355 1.55070278093223e-08 2.82340479026258e-44 6.26431113339403e-34 0.0315628937945015 0.0290554048281621 0.00819353520644869 2.26155102656374e-16 5.70752170324558e-13 0.000128077771437412 0.0185408544876716 0.0139623963742992 0.0121952753923576 0.000122207100320767 5.07099037115923e-05 0.000585098041599878 XM_001787818.3 LOC788860 PREDICTED: Bos taurus zinc finger protein 479-like (LOC788860), 0.0 1205 73.10 0.489957963568426 NM_001256651.1 ZNF43 Homo sapiens zinc finger protein 43 (ZNF43), transcript variant 6, 0.0 801 73.49 0.310368986454928 TCONS_00084380_8 sp|A2VDQ7|ZN420_BOVIN ZN420_BOVIN Zinc finger protein 420; 3e-137 416 51.90 0.889125799573561 8 noncoding 0 0 0 0 -0.692510824680467 0.0240612736429091 -0.440208055814473 0.00123403644784711 TCCTGTGGGAGCATCAGTGTGGTGTGTAGGAAGTGCTCCAGGGGCTTCTAAGGGGAGGCCTGGGTTAAGGACGTGGCTCCTGGTCCATTTGTGAGAGCTGAGGCCTGGCTTCAGTCCAAGCAGAGGCAACAACTTCTGCTCTGCATGAGCTTTAAAGGGGCAAGTCAGTGCAGCCCACACACCCCATGTTAGCAGAATTTGGGGGACTTTATATGAAGAAAGAAGAGTAGACAACAACAACAAGTTGATAGATTGGTCTCCACGGAGGAGCTGATTGTCCTGAATCTCTCTCTGAGACAAAGGACAGGAGAGGTTGGCGTTTCCCGCTCTTTAGGTCCTTCTGCCTGTGAGGGTGTTGGGAGCAGGCGAAGGAGCTGTGCTGGCGCCTCTGAAGGTGTAATCTCATGACGCTGAGGTGATTCCTCCACAGTCTTGATGCGAAAACGACCCAGGGCAGCAGGAAGAAGAGGAGGAAATGGCAGCTTCTCAGGTCCCCTTTGGAGGAAAGGAAGAATCCCGGTGCTAGGTGTGAATGAATGAAGCGGATGACACAGGTGAGAGGTCCAAAGACCACAGAGGAAGCCAGACGTGTTCAGATGGTTTGGGGAGGCCTGCTTCACTAGAATGAGAAGCCTGGGTTTATGTCTGCCAAAGAGGGACATGACCGGCCCCGTTCTTCTGCTGTTTCATCTCCATCTTCTTCAGCTCCAGTGGGTTTTCCCTCAGTTTCACTGAGAGCCAAAACCGTCCTCCTGGTCTATGAGGACCTGCATACTCTCGCTGCTTTGGGGGACCTAGGAAAAGCTGCTAACAGTTCTGACAAACTCTGCCTTAAGGCCTTTCCAAATTTCCGTCTCTGCCTCAAGTCAGAAAAGAGTTGTGGAGCTCTGGGATTAGTTGACAAAATTCCAGAAATACTGGGAACAGATATATGCTTCCTGCTTTCTAATTTCCAATGGAAACTTCAAACATGGCTCTCTGAAGTTCATTCTCAGTCCCTGAAATCATAAAAGCGATATCTTCTCATGACACCCAGGGTTTGTTCCCAAAGAAGCCGTGCATAGGAGATTCATGTGTAATGTGCTCAGAAATTCTGAGAGCTCTCAGCTTGGAAATGTGTACTTAATGAAAGACTGGGAAAGTAAGGGGGGCTGTGAAGGGCCAAAAGGATGTTGTTTTAGATGTAACCAAATCGGGACAATTATTCATGATGAAAACATGATTGCCAAAAGAAATTGAGGATATGCATCAAATTGGGAAAAATTCCATTTGAAGTCAATAAGTTCTGCAGAAAAATATGTTTTTGTAAGCAAGAACCCACATGATTTAAAAAAAAAAAACAAACATATTCTCTGGTGTGAAATTTTGAAAACATGGAAAGTCATCTAGTCTATGCTACAAATAATCACTCAAACCAGTATGAATATAGGTTTGAATTAAACAGCCAGTCATACATGTCTGAGAGCCAGAGATTTGAAAATGAAGGAAGAAAATCTCACTATGATCAGTTTGAGAGATCCTTTAGTGAAGGCTCATTATTTTTCCACCAAGAAACATTTTCTCCCTATTCCAATATCTGTAATGTCAATAATAATGAGACAGTCTTTATCCAGCTGCCGTCATTCAATGGGTATCATAGTACAGATAATGCGGAACAACCTTCCATGTGTAATCCCATGAGTGAGGCCTTAAGCCAGAGCTCCACCTTCAATAATTACAACAGTATTTATGATGGAGCCAGAATCTACCCATGCCTTGAACCTGGGAATCACTTTGACCAAGACTCAGGTCTCATGAATCATCAGAGAACTCTATATTCAGAGAACCATAGTGATGAATGTAGAAATGTCTTTTATCAAAGCTCAAATCTTATTACAGATGGGAATATACATATTGAAGAGAATAATTACAAATTTAGTGAATGTGGTCAAGTTTCTAACCAGTCATCAGAACTTACTCAACATCTGAGTATTCATGCTAAGGAGAAACACAGCAAGTGGAATAAATGTGGGAAAGTCTTTCCTCAATTATCAAATCTAAATAGACACAGGAAAATCCACACCGGAGGGAAACGTAACCAATGTGCAGAATGTGGCAAAACCTTCAGCAAGCCCTCAAGCCTTACTCAACATCTCACTGTTCATACTGCAGAGAAGACTTACAAATGTCCAGAATGTGGCAAAGCCTTTAATCAGAGCTCAAACCTTAATCGACATAGGCGAATCCATACTAGGGAGAAACCATATAAATGTCAGAATTGTGGGAAAGCCTTTAACCAAAGTATAACACTTATTCAACATCAGCAAATCCATACTGGGGAGAAACCATACAAGTGTAAAGAATGTGGCAAAGCTTTTATCAGTTGCTCAAAGCTTAATCAACATCAGAGAATTCATACTGGGGAGAAGCCTCACACATGCAGAGAATGTGGGAAAGCCTTTAATAGTTGCTCACATCTCACTGTGCATCAGCGAATTCATACTGGGGAGAAGCCTTATAAATGTACAGAATGTAACAAAGCCTTTAATCATCACTCAAACCTTACCCGTCACCAGAGAATTCATGCTGGGAAGAAACTATACAAATGTACAGAATGTGGCAAAGCCTTTAATCAAAACTCAACCCTTACTCAACACCAGCGAATTCATACAGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCGAAACTCAACACTTACTCAACATCAGCGAATTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATTGAAACTCAACACTTACTCAACATCAGCGAATTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCAAAACTCAACACTTATTCAACATCAGCGAACTCATACTGGAGAGAAGCCTTATAAATGTACAGAATGTGGCAAAGCCTTTAATCAGAGTTCAAACCTTAGTCGACAGGTGAATTCATACTGGGGAGAAACCATACAAATGTAAAGAATGAGGCAAAGCTTTTAATTGCCACTCAAATCTTACTTGCCATAAAATAATTCATACTGCCAAGTAGTCTTACAAATATAAATAATAGGACAAAGCCTTGAAGTGAGCCGTCACCTCACTCAGCATCAGAGAGCGTGTGCTGGAGAGAGACCCTACAAACGTAGTAAGTGATGAAAGAGGTTTGTCCTAAGCACACACATCAGAAAATGCCAGAGAGTTCATACTGGGAAGAATGCTTAATGCTGTAAAAAATGTACAAAATGAATTTAAAAACTCAGGTCTAAATAAATATCAGAGAATTCATCAAAGATAGCATTCATTCAATAACCCTTTTCTGGTATTACTTTAAATCAGGATATTATAGAAAATAATCCAAAGTGAAAACACTTAGAAAAATTATTTGTTACTTGGACCATAGGATCAAGGCAAGAGATGTTGGACAACATAATTATTATCATTGTATCCTTATTCATATTGACAGTATGTGAAAGTGAAATTTAATATAACTCAACTTTCAAATTACTATGTGCTATACCTTTAGTGTGTATGTGAATATGCTTTTTTAAAACTAATATTCTTGATCTTTGCTGCCTCAAAGTTAAAACCCTTCTATAATAGGTGGAAATAATTTTTATCTACTTTTTTATGTACTATTAAGGATCCTCTAATGTGAAATGTACAGTGGAAGTCTAAATGGAGGTGATGATTGTCATTGTTTAAAACATCCCTCTACGTCACCGCTAGGTAAGTGTTCAGAGAATAATTCTTTGTATTAAAGTAAGACAGAGAGTCGAAATTTTAAATAGTTGTGCCAATGGTTTTTTATGGATATAAAGATGGCAGCTCACTGAAATCCTGATGTATTTTTATAACAGCAATAACTAGAAGTCATGAATTTTAGTTGACATGGTAACAATCAGGAAATCTTCACAGATACCCAAGAAAAATACATGTAACCTTTTCCTGAAAGGTGATGTAATGAATGTACATCCTTGTTTACTAAATAACTGCTCTCTCTGTTTTGTAAACCATAAATATCACATTTCTCTGACCACTGTATCACAAGAACAAGAATGTTTCCAAATGCTTGTAATCTGTATTTTGATCAAAGATTATAGAGTAAACTTTGGAAAGTTTTATTTAGATTATGTGTGAATTTACTATATGTTAATCAATAAAAGTGAACGGCTTTTCATATATTAAACTTGATGTATATTTGAAGAAGTGTTCTCATCAGTAACAAGCTTCCAGGTGGTTCAGTGGTAAAGAAC TCONS_00084375 s 3' 7780 TCONS_00084375 s 3' 7780 EMBV3_11761 CTCCATGAGAAAAAGGAGCATTCCACTGCACATGGAGGATGGAAAGGAAGATAGTAAAGT Variant GeneID:522917|RIOK3:NM_001075836:25_cdna 831^958 5 EMBV3_33488 GeneID:522917 24 GENE RIOK3 MGC138071 RIO kinase 3 (yeast) EMBV3_41517 TTGCTCGGACTCCTCTACGGCCCTTATCAGACTGTCCTGGAATTGTTTACCTGGCTGCTT Gene BVT0102_216978 + 1 EMBV3_39959 GK000027.2:25556382-25637685 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155320 TCONS_00155319 TCONS_00155321 1 XLOC_094691 Coding TCONS_00155319 XLOC_094691 Coding Coding RBPMS 27:25636742-25816022 j TSS116228 1052 1 TCONS_00155319_1 115 8 0.994176674345573 0.00408128840942058 0.00353744456683672 0.0023947637525638 0.00356306940756979 0.00251835076366266 0.00100365246280927 0.000545243769801891 0.00246170591759574 0.00294139777624293 4.2733222754065e-05 0 3.62427085864735e-65 0.000737374964507136 0.000281803732303945 0.00112872596322461 3.1507089154791e-160 2.34388543081277e-276 2.03049114422714e-66 0.00275876492240189 0.000931000206552182 0.000322476915836766 1.84521294757587e-32 6.46539282645901e-05 2.80165840365605e-221 0.00403963543215041 0.0012450847061459 0.00111871292015772 8.94234956873182e-05 3.43997007634193e-05 9.45701748015597e-192 NM_001046535.2 RBPMS Bos taurus RNA binding protein with multiple splicing (RBPMS), 0.0 1155 92.24 0.733840304182509 NM_001008712.2 RBPMS Homo sapiens RNA binding protein with multiple splicing (RBPMS), 0.0 955 85.64 0.733840304182509 TCONS_00155319_1 sp|Q93062|RBPMS_HUMAN RBPMS_HUMAN RNA-binding protein with multiple splicing; 1e-42 142 97.26 0.626086956521739 0 coding 0 0 0 0 0.00309123603939998 0.97982223450493 0.000904148763697585 0.984089626232975 CGTTTTCAAACTGCCATAGGATTCAAAAGACAAACAGGGCCCGGTCTTGTCTTCCAAGAAGGATCTCCCGAAAGGGTGAGAGAGGCAGCCAGGTAAACAATTCCAGGACAGTCTGATAAGGGCCGTAGAGGAGTCCGAGCAAGGGTGGCCGGAGAAGTTTCGGAGGACCCGGCGTGGAGGTGGGGTTTGAAGATGCGCCCTGAAAACGCCGGCCCGGCCCGGGCTGCCCCCGGACGTCACCCCAGTTCCCGCATCCTGTCATTACCAGCTGCCCACTAGGTCCGGACTCTCTTTGTCAGCGGTCTCCCTCTGGACATCAAACCTCGGGAGCTATATCTGCTTTTCAGACCATTTAAGGGCTACGAAGGTTCTCTTATAAAGCTCACATCTAAGCAGTGTACCAAAAGGTGATTCGGTTCTCTTTGCATTTTAAACGATGAAGATGCTGAGCCCGTAGGTTTTGTCAGTTTTGACAGTCGCTCAGAAGCAGAAGCTGCCAAGAATGCTTTGAATGGCATCCGCTTCGATCCTGAAATCCCGCAAACACTACGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAAGAACAAACTAGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGAGAGCCATATGAGCTCACAGTGCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCAGCGGACTTAGCGCCTGCGCTGCCTCCTCCTGCTTTCACCTACCCCGCTTCACTGCATGCCCAGTGTTTCTCTCCTGAGGCAAAGCCCAACACACCTGTCTTTTGTCCACTTCTCCAGCAAATTAGATTTGTCTCTGGGAATGTGTTTGTAACATATCAACCTACTGCAGACCAGCAGAGGGAGCTCCCATGTTGAATTTGCTTGTTAGCTGTTTTTTGTTGTTGTTGTTTGTTTTTTCCCTTCCCTCCCTTTTGCAAAAACTATTTCTTGGTAACGTTTGAGAGATTTCAATAAAAATTTTAATTAGAGCAAAAATGATC EMBV3_04147 GGCTTGCTGTTCCTGTTGTGAAAGCAAGGAGTAGAAGACTGGATCCATAGGCTACAACCT Gene GeneID:100140532|LOC100140532:XM_002690787:217_cdna Constitutive 0 NULL GeneID:100140532 10 GENE LOC100140532 NULL similar to novel ankyrin repeat domain containing protein EMBV3_29808 GTCCTATGATACTACCTTCCATGACGACCATGTGGTAGTTGCCTATGATTGGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_41192 TTTGTGTTGGGAAAAATGCCCTTGCTGGGTGGGGGTGGGGAGCCTACCACATAGAGCCTT Gene GeneID:511099|CDC42EP1:NM_001075495:49_cdna Constitutive 0 NULL GeneID:511099 5 GENE CDC42EP1 MGC139135 CDC42 effector protein (Rho GTPase binding) 1 EMBV3_00282 ATGCACCTTTAGGAAGGTTGTGTGTCAGACCCCTCTGTGATGGATAACCCTTGGACTCTC Gene GeneID:519789|LOC519789:XM_002694803:645_cdna Constitutive 1 NULL GeneID:519789 18 GENE LOC519789 NULL similar to Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) EMBV3_23215 CATCACTGAATGCTGGACTTCATGGCTTGAACCCTACCTCAGCACGGAGTATCAGATGCT Gene BVT0101_067299 - 0 NULL GK000008.2:58010786-58234585 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25167 CCCTTGGACACCCTTACAATAACTTGCTGCCTCCTTACAGATTCAGACCTGACCCATCTG Gene GeneID:522065|LOC522065:XM_002694083:324_cdna Constitutive 0 NULL GeneID:522065 16 GENE LOC522065 NULL similar to preferentially expressed antigen in melanoma EMBV3_35683 CCGACAGAATGCAGAAGGAGATCACAGCCCTGGCCCCCAGTACCATGAAGATCAAGATTA Gene GeneID:281595|ACTG2:NM_001013592:2_cdna Constitutive 0 NULL GeneID:281595 11 GENE ACTG2 MGC129006 actin, gamma 2, smooth muscle, enteric EMBV3_07675 CAATGATGCTTGGGTTTGCACCAATGACATGTTCAGGCTTGCCCTGCACAACTTTGGCTG Gene GeneID:614921|NUTF2:NM_001037624:435_cdna Constitutive 0 NULL GeneID:614921 18 GENE NUTF2 MGC134045 nuclear transport factor 2 EMBV3_15616 CTGTTTGTGCCAACTGGAGAATTGCTTTTAAGTCGTGACCCCCTTGCTTGGGTCTAAGGC Gene GeneID:538632|SFRS2IP:XM_002687322:135_cdna UTR3_Alt 2 NULL GeneID:538632 5 GENE SFRS2IP NULL splicing factor, arginine/serine-rich 2, interacting protein EMBV3_32774 TTTCCAGACAGCAACCACAACTATGCAAGCGAACTTCCGCAAACACCTGCGCATGGTCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03133 GAGAAACCGAGCTCCAGAAAGGTCAAGGGGTCTGTTTTGCCAGGTGATTTCCAAGTGGCA Gene BVV0102_436529 + 0 NULL GJ059753.1:1-21921 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12959 CCCTGTATCCCTCTCTTCTGGATAAAAGGAGCCTGAGACATCTCCACCAACCCAAAGTAC Gene GeneID:513221|HMOX1:NM_001014912:28_cdna Constitutive 0 NULL GeneID:513221 5 GENE HMOX1 HO-1 heme oxygenase (decycling) 1 EMBV3_41914 CTGACGGTCCCAAGGGTGGATGCATTTGTGGGGTGTGGGGTTTCTTTCCCGTTTTCATTT Gene GeneID:505316|MGC127138:NM_001035269:26_cdna Constitutive 0 NULL GeneID:505316 7 GENE MGC127138 NULL chromosome 19 open reading frame 21 homolog EMBV3_00030 TGCCCATCCCAGCAGTGGTGCAGACCTCCCACATGGCTTTTGACAGCACTGTTTACATAT Gene GeneID:512627|LOC512627:XM_002693460:37_cdna Constitutive 0 NULL GeneID:512627 15 GENE LOC512627 NULL similar to olfactory receptor Olr37 EMBV3_25497 TGATAGGGTAGGACACAATGAGGTCATAGGAGTTTGTAGAACAGGACTGGACGCCAAGGG Gene GeneID:537613|SYT10:XM_002687695:81_cdna Constitutive 0 NULL GeneID:537613 5 GENE SYT10 NULL synaptotagmin X EMBV3_22488 CCCGTTAGTTGCTGGCATCCTTTCTATAACATTGTCTGTATGGGTCACTCCAGCCACAGG Gene BVT0102_133372 - 0 NULL GK000007.2:48079677-48390757 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216955 TCONS_00216956 TCONS_00216957 TCONS_00216954 1 XLOC_131388 NonCoding TCONS_00216954 XLOC_131388 NonCoding NonCoding - 7:48140010-48143663 - TSS161689 974 2 TCONS_00216954_3 86 0.293634496919918 2 0.733844468784228 1.82993868286444e-45 0.000348130297846167 0.000355391259365112 0.0014408641143932 0.000446912872330146 4.77544398274004e-14 8.08795893556772e-05 0.000212467341559357 0.000192138742462025 0 1.80791815003414e-07 0 6.60608826430091e-05 1.16628290457334e-08 0 0 0 0 0.00102622649926587 0.0018114786115738 9.23170268076688e-06 0 0 0 4.55593426207015e-05 3.46916063786441e-35 9.1077340304187e-05 0 0 0 0 noncoding 0 0 0 0 -0.0105270776947294 0.942068299143842 -0.0474620968439211 0.409131757014143 GGGTGAGTGCTCAGCTTTTATTGGAAGCAGGCTTGGCCTGAGTGCATCTGAATTCATCCTTCCTGGTGCCCAAACCAGCCCAGAGAATTCCTGTGGCTGGAGTGACCCATACAGACAATGTTATAGAAAGGATGCCAGCAACTAACGGGGCACAGAACTACAGGAGTGGGCAGGCTGTAAGGGCTCCCTAACTGAGAATGCCGTGTCTCCATGCAACACCCTGGGTCTGCCTCTAATGCCTGGAGTCTTTCCTGTTCCAAGAACCAGCAAGGCTGTGGTCATGTGAAAAGCATTCTTGGGGGTTGTGTGTGCACAGCCAACATGACTGCACACAAGGGCCTCGACCAAAGGCAGTACACACAATGTCTGGGTGGGTGGCCAGAACTCGAAGTGCCCCCTGGTTTTTAAAAAAAAAAAAAAAAAAAGGACGGAGTGGGGGTGGATTGCTGTTTCCCAATGTGTTTCTACAGAAGGCTAGTTCTTTGGGCTATTCATCAGAGTTAGGGATGGAGATGCTGAGATCAGATAACATCTGAAGGAAGCTGGATTTAGACACAGCTAAATCCACCTCTCTACTGTAGGACTTCTTGGAGTCCTGGTGGAATAATGAGCACAGGGAATCTCCAAGAGAGGAGATAAGATGCAGTGCTTCCCAAACTTACTGAACCATGGAACCTCTTTCCCCATACAGCATCTCTCAGGACAGTGATCCAAAACACGTGTTTGGCCAAGGCTCAGGAAGACCCCACACTAATAGGCCCCACCACGCCATCAGCCAGGAGGGAAGCCTGCCTGTCCCCGTCCTCACCGAAGGATGGTCACCAACAGGAGAAGCTGCTCTAGAAGCACGGGAGGAAGACGCTCAGCCCAGATCCACTCCAGATCCCACAAATAGGCTTGAGCAGGCTTGGGCAAAGCGTGGATTATGAACCTCCCAGGTGGACGGCAGCGAAGGTCTCCTGCCGAGGCCTCAC TCONS_00216953 s 5' 60335 TCONS_00216953 s 5' 60381 EMBV3_32809 GGCATCTACGCCAAAGTGGACCAGCTGGAGAAGCGATGGGCACCGGTGGCCCCGACGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18606 GAAAAGGACCCAAGCTATGCTTAACAAGTACAGATGCCTGCTCTTGGAGGATGCCATGCG Gene GeneID:540169|LOC540169:XM_002697241:427_cdna UTR3_Alt 2 NULL GeneID:540169 23 GENE LOC540169 NULL similar to Uncharacterized protein KIAA0240 EMBV3_25700 GATGAGCAATGTGCAGAAACTGTTTGTCTCCCACATCCATCTGCCTGATCCTGAGGAGTG Gene GeneID:789197|LOC789197:XM_002694071:279_cdna Constitutive 0 NULL GeneID:789197 16 GENE LOC789197 NULL similar to preferentially expressed antigen in melanoma EMBV3_08757 GAGGGGTAGGGAGGAGACAGGCCATCACACAAACAGGACAGCGTTTAGTAGAACACACTT Gene BVV0101_038696 + 0 NULL GK000006.2:101095293-101195830 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206018 1 XLOC_124809 NonCoding TCONS_00206018 XLOC_124809 NonCoding NonCoding - 6:101193808-101195125 - TSS153718 1317 1 TCONS_00206018_1 56 0.225512528473804 1 0 1.35483753743832e-10 5.33950280957587e-05 2.55501456012096e-05 4.87506911148142e-11 0 0 8.85567128079049e-05 7.97014526233575e-06 0 1.24965248482444e-05 0.000151221982853022 5.43003235431925e-06 2.60420334359638e-11 4.63128010555457e-11 0 0 0 0 2.72197257911766e-05 0.000652020715528758 2.30503432728043e-06 4.62892073319324e-11 0 0 2.63039223227296e-05 0.000130078718356579 6.40776948232245e-05 8.02255041487721e-05 0 0 0 noncoding 0 0 0 0 -0.0230734997717938 0.869163660510566 -0.0212916523756959 0.666136593144411 GTGAGGGCTGAGAACTTGTGGACTCGCCCCGGAGCCACTGGGAGGGCCGGAAGAACTCCTCGAGGGCCGCCAGGTCAGTATTGACCGCGCTCGGCCCCTACCCTTTCTCCGGGCTCTCCGCAGCTAGACACACCTCGGCGTTCAAACCTCAGAGGTTCGGGAGGTCCAGAAGCAGAAACCTGTGGGGCAGGATGAACCGGACGACTTGGAGGCATTCTGCCCGGTGTCATCACCTGCAAAAATGGGAGATGCGTTGGCCTCACTGGGAGTCCTGGGATGAGTTGGCCAGTTTCAACTACATGCCCGAACTGCTTCTCCAAGGACTTCGAGCATTGAAATCTCTCAAAAAATTCACTGCCTAGGGCCTGGAGAGGGAACCAGGACTCTGAGATGCCCCCAGGTGTGGTTGCCAACCAGCTAATCTCTAAGCAGTCATGGACCTTGAGCTGCTAAAGTTGGAACAGGAAGGGCACAAGATCCGCCTTAATTCCGTTCCAAATCCTGTTAGAAGGTGATTAGTTTTCTTGACACGTATGTACCACCTGGTCATTACTGACAAGCTGACACATGGGACGAGGGGTAGGGAGGAGACAGGCCATCACACAAACAGGACAGCGTTTAGTAGAACACACTTATAGAAATAAATCAACAATATAAATCTCTCAAGGTCATTACCGACCCATTGAAAACAAGTAATGTGGTTCTGAAAACTGAATAACAAGCAGAAATAAAAAGTCAAAGTAGGACGCACTGAAAACCAGGGCACAAAGACATTATTTTCCATCATCAAATAGATCTTTAAAGCTCTGAGTTCAGATTGGGTCGTCATATTTTCAAAGGGATAGAGAGGAAAATCAGTCTTCTGGGAAGAGCAAAAATGACAAAAGATATGAGAAAATAAGTCCTTTGAGTCACAGTCATGGCGTGGTTATCCTTAAAGAACGGACGACTATAGGGTGACTAGTTTAATCCATTGTTCTTCATTTCTTTGGAGAACCAGAGATGAAGCACTGCCTGATTCTCAGGAACATAAAGTTGAAGAGACTGATGAAGGCAGTGATGGAGTCTCCCATCTGAGGTCTTGTTTAGAAGCCTGAGTTCTAGCTCCACCAATGCCACTAATTGGGTGTGGCCTTGGATAAGTCATTAAGCCTCAGTGTCCCCAACTATAAAGTGGATAGTTGGGAGGATGGCCTTTTGTGGTCCTTTCCAGCTTACAAATGATTCTGCAACTAAAGCCTCTCTTCAATAGACGCCAGTCCTTCCTTGCTCCCGTGGCTCAAGAATAGGGGACCTGATATGGCACTCAAATGGTTT TCONS_00203957 TCONS_00203958 TCONS_00203959 TCONS_00203960 TCONS_00203961 r 5' 410 TCONS_00203957 TCONS_00203958 TCONS_00203959 TCONS_00203960 TCONS_00203961 r 5' 410 EMBV3_25072 GCTCCCCACCATTACTGTAATTTATGAAAAGAAACTTTATTTCTGCCTCCGGGTACCCAG Gene GeneID:534327|NHLRC2:NM_001083723:63_cdna Constitutive 2 NULL GeneID:534327 26 GENE NHLRC2 MGC140213 NHL repeat containing 2 EMBV3_32421 GGAAGAGGAAAGGACCTGCCCGTTTTGATACTTCGCTGTAGGTGGCCAGTTTTGTTTCTC Gene GeneID:529699|ZC3H11A:NM_001099947:70_cdna Constitutive 0 NULL GeneID:529699 16 GENE ZC3H11A MGC142959 zinc finger CCCH-type containing 11A EMBV3_43035 GGAAGGGATAGTACCTAAGACAAGAGAGTTTGGATGGTCAAAGGAGAGAGACACCCCCGT Gene GeneID:767586|KANK2:NM_001076531:111_cdna Constitutive 1 NULL GeneID:767586 7 GENE KANK2 ANKRD25 KN motif and ankyrin repeat domains 2 EMBV3_29454 CATGTTTTGAAGCTGGATGATTACTTGAGACTTTGACAAGCAGGTGTGGGTACAGGGAGG Gene GeneID:525262|FAR1:NM_001099032:143_cdna UTR3_Alt 2 NULL GeneID:525262 15 GENE FAR1 MGC139098 MLSTD2 fatty acyl CoA reductase 1 EMBV3_04125 ACATCCTCAACATCCAGCAGGCCATTGGAGCCACACAGAACCAGTACGGTGAGTTTGACA Gene GeneID:529879|CYM:NM_180994:140_cdna Constitutive 1 NULL GeneID:529879 3 GENE CYM CPC Chy chymosin EMBV3_29175 TCTGAGGGACTCCATGACGGTATCCGAGCTGAAGCAGTTCATCGCCCAGAAGATCAATGT Gene GeneID:281871|ISG15:NM_174366:19_cdna Constitutive 1 NULL GeneID:281871 16 GENE ISG15 NULL ISG15 ubiquitin-like modifier EMBV3_02689 TAGGTGGGCACATATGGCTCCTGGGCGAGAAGGTCAGCAAGTAAGGTCAGACAGCCCTCT Gene BVV0102_013775 - 1 EMBV3_17247 GK000021.2:70984395-70997329 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42847 CAGCCACCAGTGCGCCCCTGTTCGCATCCCCTGCGCGGCAAGGAGAACAAGGGGTCTGTG Variant GeneID:618753|RNF187:NM_001164265:46_cdna 163^574 1 EMBV3_27704 GeneID:618753 7 GENE RNF187 NULL ring finger protein 187 EMBV3_29946 GGTGGGTGAGAAGGGGGTTCTGGGTCATGCTTTGTTGATTGGAACGGAAGCGGTAAAGAA Gene GeneID:539390|ZNF498:NM_001076159:266_cdna Constitutive 0 NULL GeneID:539390 25 GENE ZNF498 NULL zinc finger protein 498 EMBV3_21547 ACACTGATATTTGGAATCTTTTAACATAGGGGTCAGCAAACTGTGGTCTGTGGGCTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30310 ACAGCCTAGCGCAGCAGCTTATAATGGGCTCTCCGGGGCCATTTGCAATAACAGCTGCAA Gene GeneID:505664|FRAT1:XM_002698415:358_cdna Constitutive 0 NULL GeneID:505664 26 GENE FRAT1 NULL frequently rearranged in advanced T-cell lymphomas EMBV3_24648 GGAAACAGCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGATTTGTCAAACCACAT Gene GeneID:540504|SYNE2:XM_002691063:493_cdna Constitutive 2 NULL GeneID:540504 10 GENE SYNE2 NULL spectrin repeat containing, nuclear envelope 2 EMBV3_07839 GTGGGAGCAGTAAGTTAAACCATGATATGCTTCGACACGCTTTTGTTACATCGCATTTGC Gene GeneID:281062|CDH2:NM_001166492:49_cdna Constitutive 2 NULL GeneID:281062 24 GENE CDH2 NULL cadherin 2, type 1, N-cadherin (neuronal) EMBV3_38900 TCAGTTTGTCAAGGAATGGAGCTGTATAGTGTGGCCAGATCACCATCTGCTTGCACCACC Gene BVV0102_064198 + 1 EMBV3_06514 GK000017.2:13736748-14230808 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074907 TCONS_00074908 TCONS_00074912 TCONS_00074910 TCONS_00074906 TCONS_00074909 TCONS_00074911 TCONS_00074914 1 XLOC_046450 NonCoding TCONS_00074909 XLOC_046450 NonCoding NonCoding - 17:13737208-13739689 - TSS56634 1019 2 TCONS_00074909_1 49 0.160942100098135 3 0.590322580645161 0.000172202235864788 1.65136356817198e-49 5.58256304005518e-05 1.94092340553429e-62 0.000956755369591717 2.05960691703738e-05 6.74077200580543e-92 7.90292707111899e-183 5.91959423940919e-260 5.86970778626436e-23 2.10822757282606e-06 0 4.53316918123874e-50 6.86562103347557e-149 3.78722231846341e-26 0.000401508617568792 0 2.46230631004188e-05 8.94957715690932e-34 0.000254700660346345 0 8.01052763340418e-05 0 0.000403430968458444 6.50893145656663e-05 9.1910370891643e-07 1.15410369234173e-18 0.000216800075295425 0 1.76214911071928e-08 XR_232864.1 LOC101907673 PREDICTED: Bos taurus uncharacterized LOC101907673 (LOC101907673), 0.0 1113 100.00 0.604514229636899 XR_244640.1 HHIP-AS1 PREDICTED: Homo sapiens HHIP antisense RNA 1 (HHIP-AS1), transcript 2e-41 174 66.88 0.575073601570167 0 noncoding 0 0 1 1 -0.065283304567702 0.541707542656315 -0.0118567806954286 0.805533940771416 CCCTTCCAGGGCCTCCCCTACCCCGGCTCCGACCCGCCCCTTGCCCCGGAGGGAGGGTGAGCCGAGTGGGCTGGAGTTGTGGTGGGGGAGCGTTTCGGCCCCTTTCCCCACCACCCTGGCCCGCGCGACTCCTCCATCCCCTGGCGATTTCCAGTGTGAAGCTCACGCCGGTACAAATCTTCCTGGGGTCACATTGAGAGGCGGGGATATAGCCCAGATGCTGCAAGTCGCTGAGAATGTGCAGATGAAGACTGTGCCGAGATTTACCTCTCCGTGCCTAAGTCCTGCGCGCGCCTTAAGTGGCACAAGCGCCTGGCCTGGATTTGCTAGTGGAACTAAGTTTTTCCCGAAAGAGGTGACAGAATAACTGAGAACAATCTGCTGGGCTGTGGAATCCAGTCCTGAGCTCACTAGGGAAATAGCAAACTCATCTATAACCAGATCTTCAGCATATTTTTTTTTTAAGAATCAAGAATCAACATTGAGCTATTTTCTGAAAGTAAACCATTAAAGCCCTCCTGGAGTCTGCCCAACGGTCTGCGAACTTGAACCTGAGAAATGGACTTGTTTTTCATCAGGGTGATCTCCTTCTTCAGCTGAATCATCAGAAGTGGTGAGACGAAAAGACTCCTACCCAACCAAACTGCTTCAGACAAATTCAATCAGTTTGTCAAGGAATGGAGCTGTATAGTGTGGCCAGATCACCATCTGCTTGCACCACCACTGAGCTGTCTCTCTACGACTGCCACCTACATGTAGGTTGTACCCAGTGCAGGGCATCCCGCTGAGGCAGGGCTTGGGAGCTGAAATCCTGCTCCATTCACCAAGCCAAGTTTATTGGTGCCTGGCCAAATGATGTGGCTTCTTTTTCTAATTTGCACCAGTGCACCCTGTACGGTCTAGTGACATGTCTGACCATCCCAATCCCATACCCCAGTCCTATCTGAGATTCTATTCCTTACCTCAGATGGATTCAAGGTTTTCATGAACAAATTAGGTGTCTTGCAAAAGATGAAATG TCONS_00076709 r 5' 0 TCONS_00076709 r 5' 0 EMBV3_07953 GGGGAAGTGAGGCCGGACATAGCTCACCAGCTTTTACACAAACTCAGCGTTCGAGCGGCT Variant GeneID:515362|EMG1:XM_002687861:96_cdna 428^574 6 EMBV3_41949 GeneID:515362 5 GENE EMG1 MGC138092 EMG1 nucleolar protein homolog (S. cerevisiae) EMBV3_42553 CATCTGTGACATGGTGGTATATTTTGTATCAGTGGTGCTGGGTGGTGGTTCCCTTGGTGC Gene GeneID:614468|LOC614468:XM_002688662:65_cdna Constitutive 0 NULL GeneID:614468 7 GENE LOC614468 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_01756 TGACGGACAAGATGAAGCCGGAGGAGAAGGTGGCCGCTCTGGACTATCTACACTTGAAAA Gene GeneID:617757|TSKS:NM_001046609:421_cdna Constitutive 0 NULL GeneID:617757 18 GENE TSKS MGC134104 testis-specific serine kinase substrate EMBV3_33562 GAGTGCTCTGTACCAGTGCTCATCATCCCTTCTTCATACCAACAGCCCTAGTTACAGGAA Gene GeneID:522928|PHF3:XM_002689978:7_cdna UTR3_Alt 2 NULL GeneID:522928 9 GENE PHF3 NULL PHD finger protein 3 EMBV3_01939 GATACCCAGTTGGAGTCAGTTGAACTTCTGCAGCCTCAGTTTTTTCTTCCACGCCTGCAG Gene BVV0102_164286 - 1 EMBV3_25869 GK000007.2:39337799-39351902 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212857 1 XLOC_130272 Coding TCONS_00212857 XLOC_130272 Coding Coding FAF2 7:39268332-39340178 j TSS159595 2233 1 TCONS_00212857_3 445 12 0.969086227294871 0.000207446260079597 0.000188369250996061 8.63508697028125e-05 0.000152661601015313 0.000385969713353924 7.30557441811854e-10 0.000219884497832298 0.000107896932112892 1.09582223645903e-05 8.17851000845443e-05 0.000162863486750508 0.000264343056559109 6.7216946176516e-06 1.65539446721019e-05 8.68593371590761e-10 0.00329061298507687 0.00338682010498934 0.00395144700985531 8.85360220121068e-05 0.000405648635907629 3.42794557843554e-10 0.00144046874014846 0.002062949748386 0.00251961393055166 0.000220801018264807 2.1066342551879e-09 4.24643395510494e-05 0.000536608506301704 0.000712441105798694 0.00144815977791597 NM_001077020.1 FAF2 Bos taurus Fas associated factor family member 2 (FAF2), mRNA. 0.0 2773 100.00 0.687863860277653 NM_014613.2 FAF2 Homo sapiens Fas associated factor family member 2 (FAF2), mRNA. 0.0 2343 92.77 0.700850873264666 TCONS_00212857_3 sp|Q2HJD0|FAF2_BOVIN FAF2_BOVIN FAS-associated factor 2; 0.0 916 100.00 0.997752808988764 2 coding GGTGCGGACGGGTCAGAAGCGTAGAGGCGGCGGCAAAATGGCGGCGCCTGAGGAGCGGGATCTAACCCAGGAGCAGACAGAGAAGCTGCTGCAGTTTCAGGATCTGACTGGCATAGAATCTATGGATCAATGTCGCCATACCTTGGAACAGCATAACTGGAACATAGAGGCTGCTGTACAGGACAGATTGAACGAGCAAGAGGGTGTACCAAGTGTTTTCAACCCACCACCATCTCGACCCTTGCAAGTTAATACAGCTGACCACAGGATCTACAGCTATGTTGTCTCAAGACCACAACCAAGGGGGCTGCTTGGATGGGGTTATTACTTGATAATGCTTCCATTCCGGTTTACCTATTACACAATACTTGATATATTTAGGTTTGCTCTTCGTTTTATACGGCCTGACCCTCGCAACCGGGTCACTGATCCCGTTGGGGACATTGTTTCATTTATGCACTCTTTTGAAGAGAAATATGGGAGGGCACACCCTGTCTTCTACCTGGGAACATACAGCCAGGCACTTAATGATGCCAAACGGGAGCTTCGCTTTCTTTTGGTTTATCTTCATGGAGACGATCACCAGGACTCGGATGAATTCTGTCGCAACACACTCTGTGCACCTGAAGTTATTTCACTAATAAACACTAGGATGCTCTTCTGGGCATGCTCCACAAACAAACCTGAGGGATACAGAGTCTCTCAGGCTTTAAGAGAAAACACCTATCCATTCCTGGCCATGATTATGTTGAAGGATCGGAGGATGACTGTGGTAGGACGTCTAGAAGGCCTCATTCAGCCTGATGACCTCATTAACCAGCTGACATTTATCATGGATGCAAATCAGACTTACCTGGTGTCTGAACGCCTAGAGAGGGAAGAACGAAACCAGACCCAGGTGCTGAGACAGCAGCAGGATGAGGCCTACCTGGCCTCTCTCAGAGCTGACCAGGAGAAAGAGAGAAAGAAGCGAGAGGAGCGCGAACGGAAGAGGCGGAAGGAGGAGGAGGTGCAGCAGCAGAAGCTGGCAGAGGAGAGGCGGCGGCGGAATTTACAAGAGGAGAAGGAAAGGAAGTTGGAGTGCCTGCCCCCAGAGCCTTCCCCTGATGACCCTGAAAGTGTCAAAATCATTTTCAAATTACCCAATGATTCTCGAGTAGAGAGACGATTCCACTTTTCACAGTCTCTAACAGTAATCCACGACTTCTTATTCTCCTTGAAAGAAAGCCCTGAAAAGTTTCAGATCGAAGCCAATTTTCCCCGAAGGGTGCTGCCCTGCCTCCCTTCAGAGGAGTGGCCCAACCCCCCAACGCTGCAGGAGGCCGGACTCAGCCACACAGAAGTTCTCTTTGTTCAGGACCTAACAGACGAATGACACTTTTTCTTCCTCTTCTCTCCCACCCCAATCCCCAAAAGAAATGGAAAAAAAACAAAAACAAAAAAATAAGAGAGATTGATATTATTATTATTATAATACAATATTTTTTTTAAAGACTGCTGCATCCTAAGGAAGGATCAGAAACCATGCTGCCTGCAAGAGTCACCACCTGTGTGTGCACGCAAGGTCATCAGCTAAACAGAAACACTTGTTTCCGGTTTTGTTCTGCACTTCCAAGCCTGAAGTTGTAGATTCGGCTGAATTTCCATAGGAAGTGACCAAGCAAAGATACCCAGTTGGAGTCAGTTGAATTTCTGCAGCCTCAGTTTTTTCTTCCACGCCTGCAGAATTTCCTGCAGCAAGTACTTCTTTCTCCTTGCTTTCACTATAATGTTTGGACAAAAAATGGCCAATGGAGAATACTTCTTTAAAAAAGAAAAACAAACTATAAACAAGCTAAAAAGAACCTAGAATCTTCAACTGAACAGTCATTATGAAAATTGCAAATGGTGCCAAGGCCAAGGAAAAAGTTACGGAAAATGACTATGGGAAGGAGTGATAACCCCCAGAATGCAATGATAACCCCCAGAACGCAAAGTCAGGGGAGTATTAATCTGGTGCTTGAAGAAGGAGCTCCACTTTAGAACTGGTTCTGTTTGTTTGTTTGTTTTTTTAAGGACTTGCGAGAGACGCAGCAACAAGAAATCCATCCACAAAGGATGCAGTGCCCCAACGTGTACTGCACCTGAATAAGTTACGTGATAATTTACTGAGGAAATCTAGTGTACTTTAAATTTTTTTCATAAAAGTTTACATTGTATTGTAGGTTAACATTAAATGTTTTATAACAAAATA EMBV3_32868 CATCACAACGTTCGAGAAAGCACATGATGGCGCGGAAGTTTGTTCTGCCATCTTTTCAAA Gene GeneID:507051|CSTF1:NM_001077865:910_cdna UTR3_Alt 2 NULL GeneID:507051 13 GENE CSTF1 MGC142355 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa EMBV3_05507 TTCTTTTTGGCTGTGCTGGGTCTTCGTTGCTGCATGGGCTTTCCTCTCATTGTGGAGGGT Gene BVT0102_162096 - 1 EMBV3_23085 GK000020.2:31128612-31171387 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114896 TCONS_00114899 TCONS_00114897 TCONS_00114900 TCONS_00114898 1 XLOC_069390 Coding TCONS_00114898 XLOC_069390 Coding Coding NNT 20:31169959-31262611 j TSS85581 5227 1 TCONS_00114898_3 1086 0.0616032140807346 22 0.943821437437265 3.95433098916441e-09 0.000299166279411414 0.000237582720218238 2.88159919232731e-09 0.000187525184010568 9.89259334939465e-05 0.000214226942603289 0.000387927834848344 0.000826931699249609 2.64018972063312e-05 6.57623966970519e-18 1.04997324477517e-13 8.56577279874691e-12 2.39476643535997e-05 5.37505152136472e-05 0.000117748304481449 0.000803087102554041 0.000444412676993685 3.61670872443699e-10 0.000253723064381553 2.22879820330223e-11 4.66459946545296e-05 0.00018093348916575 0.000262444512523397 2.56748081407774e-07 5.95106657173967e-05 0.000242925098138157 3.67040654001835e-22 2.00172561393813e-38 0.000118473212660484 XM_005221529.1 NNT PREDICTED: Bos taurus nicotinamide nucleotide transhydrogenase (NNT), transcript variant X2, mRNA. 0.0 8089 100.00 0.857853453223646 XM_005248274.1 NNT PREDICTED: Homo sapiens nicotinamide nucleotide transhydrogenase (NNT), transcript variant X1, mRNA. 0.0 5662 88.12 0.854218480964224 TCONS_00114898_3 sp|P11024|NNTM_BOVIN NNTM_BOVIN NAD(P) transhydrogenase, mitochondrial; 0.0 2202 100.00 0.999079189686924 4 coding 1 1 1 1 -1.06909525056134 0.0578266310222079 0.0235810068559818 0.745006292154152 CGCACGGAGGCGGGGCCGAGGAGCAGCAGGTCGAGCCCGAGACAAAGAGGGTTTTGGCAGCCCCGGGAGAAGAAGCAAGGGTTCCTTGGGTGATTTACCTTTAAGGACATTGGGGATCCAGAAAATCGGGAACTTCTGTGAACATGGCGAACCTACTGAAAACAGTGGTGACTGGTTGTTCATGCCCTTTCCTCAGCAATTTGGGGTCCTGTAAGGTTCTACCAGGGAAGAAGAATTTTTTACGAACATTTCATACTCATCGGATACTGTGGTGTAGTGCCCCTGTAAAACCAGGAATTCCATACAAGCAACTAACTGTTGGGGTCCCCAAAGAGATTTTCCAAAATGAGAAGCGAGTGGCATTGTCTCCTGCTGGCGTTCAGGCCTTGGTCAAGCAGGGGTTTAATGTTGTTGTGGAATCTGGCGCAGGTGAAGCTTCCAAGTTCTCAGATGATCACTACAGAGCAGCAGGTGCCCAGATCCAAGGGGCGAAGGAAGTGCTGGCTTCTGATTTGGTGGTCAAAGTGCGAGCCCCTATGCTTAACCCAACATTAGGTGTTCATGAAGCTGATCTTTTAAAGACATCGGGTACACTGATCAGTTTTATTTACCCAGCCCAAAATCCAGACTTGCTAAATAAACTGTCCAAAAGGAAGACGACAGTTCTGGCAATGGACCAGGTTCCAAGAGTCACAATTGCTCAGGGATATGATGCGCTAAGCTCCATGGCCAACATTGCCGGTTACAAGGCTGTTGTACTAGCAGCAAATCATTTTGGACGGTTTTTTACTGGTCAGATCACAGCTGCTGGAAAAGTTCCTCCAGCTAAGATTCTGATAGTTGGTGGTGGCGTTGCTGGGCTGGCTTCTGCAGGTGCAGCCAAGTCCATGGGTGCCATTGTTAGGGGATTTGATACAAGGGCCGCAGCTTTGGAGCAGTTTAAGTCTTTGGGTGCTGAGCCCTTGGAGGTGGATTTGAAGGAATCTGGTGAGGGACAAGGAGGATACGCAAAGGAGATGTCCAAAGAGTTCATTGAGGCCGAAATGAAGCTCTTTGCTCAACAGTGTAAGGAGGTGGACATCCTTATCAGCACAGCTCTTATTCCAGGTAAAAAAGCTCCCATTTTGTTTAATAAAGAAATGATTGAGTCCATGAAGGAAGGTTCAGTTGTTGTGGATTTAGCTGCTGAGGCTGGCGGAAATTTTGAAACTACCAAGCCAGGAGAACTTTATGTTCATAAGGGAATTACTCACATAGGCTACACAGACCTTCCCAGCCGAATGGCCACTCAGGCCAGCACCCTGTATTCCAACAACATCACCAAGCTTCTGAAGGCCATCAGCCCAGACAAAGATAATTTTTACTTTGAAGTGAAAGATGACTTTGACTTTGGTACAATGGGTCACGTCATTAGAGGAACCGTAGTGATGAAGGATGGCCAAGTGATTTTCCCTGCTCCCACACCGAAAAATATTCCTCAAGGTGCCCCAGTAAAACAGAAGACAGTGGCAGAGCTGGAGGCTGAAAAAGCAGCTACTATCACGCCCTTCAGGAAGACGATGACATCGGCTTCTGTCTATACAGCAGGTCTCACTGGGATACTAGGTTTGGGCATCGCGGCTCCCAATTTAGCCTTTTCCCAGATGGTGACCACCTTCGGCTTGGCTGGCATTGTGGGCTACCATACTGTCTGGGGAGTGACTCCTGCTCTCCACTCACCGCTAATGTCTGTGACTAATGCAATCTCAGGGTTGACTGCAGTCGGTGGGTTGGTGCTGATGGGAGGACACTTGTATCCTTCCACAACTTCTCAGGGCCTTGCTGCTCTTGCCACGTTCATATCCTCAGTCAACATTGCAGGTGGCTTTCTGGTGACTCAGAGAATGCTGGACATGTTCAAGCGTCCCACTGACCCTCCGGAGTATAATTACCTGTATCTGCTTCCTGCTGGTACCTTTGTTGGGGGATATTTAGCCTCCCTCTACAGTGGTTATAACATTGAACAGATTATGTACCTGGGCTCCGGTCTTTGCTGTGTTGGTGCCCTGGCCGGGCTTTCCACCCAGGGGACTGCACGTCTTGGCAATGCCCTGGGCATGATTGGGGTGGCTGGAGGCTTGGCAGCCACCCTCGGAGGCCTAAAACCATGTCCAGAATTGTTAGCTCAGATGTCTGGAGCAATGGCTTTGGGCGGTACCATTGGATTGACAATTGCGAAACGCATCCAGATTTCGGATTTACCTCAGTTAGTTGCTGCTTTCCACAGTTTAGTGGGATTGGCAGCTGTGCTTACGTGCATAGCTGAGTACATCATAGAATATCCACATTTCGCTACGGATGCAGCAGCCAACCTTACCAAGATCGTGGCCTACCTCGGTACTTACATTGGTGGGGTGACCTTCAGTGGGTCTCTGGTTGCCTATGGAAAATTGCAGGGAATCCTGAAGTCCGCCCCTCTCCTGCTCCCTGGGAGGCACCTCCTCAATGCAGGCCTGCTGGCTGGTAGCGTGGGTGGGATCATCCCCTTCATGATGGACCCCAGCTTCACCACTGGCATCACCTGTCTGGGCTCTGTGTCAGCCCTCTCTGCTGTCATGGGTGTGACTCTGACGGCTGCCATTGGGGGTGCCGACATGCCGGTGGTCATCACTGTGCTGAACAGCTACTCAGGCTGGGCCCTGTGTGCAGAGGGTTTCCTGCTCAACAACAATCTGCTGACCATTGTGGGTGCGCTTATTGGCTCCTCGGGCGCAATCCTGTCCTACATCATGTGTGTGGCAATGAATCGCTCCCTGGCTAATGTGATTCTTGGAGGCTATGGTACCACTTCAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCACGCATACAGAAATCAACCTTGACAATGCAATTGACATGATTCGAGAAGCTAATAGCATTATTATTACTCCAGGCTACGGGCTCTGTGCAGCCAAAGCTCAGTACCCCATTGCTGATTTGGTGAAGATGCTCTCTGAACAAGGCAAAAAAGTCAGGTTTGGAATTCACCCAGTTGCAGGCCGGATGCCTGGTCAGCTTAATGTGCTGCTGGCTGAGGCTGGGGTGCCATATGATATTGTGTTGGAAATGGACGAGATCAATCATGATTTCCCAGACACTGATTTGGTCCTTGTAATTGGAGCTAATGACACTGTTAATTCAGCAGCTCAAGAAGACCCCAACTCCATCATTGCAGGCATGCCAGTCCTTGAAGTCTGGAAATCAAAGCAGGTCATTGTTATGAAGAGGTCCCTAGGTGTTGGCTATGCTGCAGTGGACAATCCAATCTTCTACAAACCGAACACAGCCATGCTTCTAGGCGATGCCAAGAAGACGTGTGATGCTCTGCAGGCGAAAGTTAGAGAATCCTACCAGAAGTAAAATATGAAGATCAAACCACTTCTTCACTTGCGGGAACAGGCAAATAAATTATTAACGTATACAGCTGATACACATCTGTAGCAAAACTCTTGGAAGAAAAGGAAGACTCTGAAGAAACAAAGCCAATAAAGGGAAAATTTTCAAGAGCTGCGATCCATCGATTTTAAAAAAGGATTGATAATTCTAAATGTCTTTCTGTGCATATTTTTTTGTTATGAATTCTAAAAGTATTTTACAAAAGGAGAAAAAACAGTCTCATTTTAGGTATATTCCATTTGGATTTTCCTCAATAGTCAGCAATGTTTTAAGAAATTAAGTCTATGATTTTGGGGACTTACATTATACATGGATTTGAAAAAATCTGACACAGTGTAAACATTACAGCCACCTGAATTTATGTTTTTTTCACCAAATGTGACTAATTTGAAACTTTTATCAACTCTTGAGCTGTCTTCTTAACCATTTAACCATAATCTGAAATAAGCGTATCAAATTGGTTTCAGTTTTTCAAACTGTACTTTAAAGTCTGTATTTCAAGGGTATATTTTCTCACTTCTATTTCAATACATTAAAGGACTAGATAATCTTTCAGAGATGCTGGAAGCAAATCATTTGCTTTGTATGTTTCATTAGAACACCAATGAAACATGTAACTTGAAATCAGTATTAGCTGTATTTTTTAAACCCCATTTCCAATTGGAGATCTCTTTTAATTTCAGTTTATATGTGTAGTACTGTATTAAGTGCACTTGAATGAAATTCTACTATTTGCCTAATAAAATGAGTTCATCATGTTTGCATAATGATGTAGCAGTTGTCTCTGGTGACAAAAGGCTAAAATCAAATAATTCTGCCTGTTAACAGCTGAGGAAGGAATTGCTATCATGAAATAGATGAGATTAAATTGTCTTACCTGTTTGGAAGAATGACTTTTTCCCTAAATCATTGTGTATTTTAAGGTGTTATGTAAATGATAACGTTTGAGAGAAATGGTGGCATTTTTCTAGCTACCTCTTTGTTTAAGCAGCAGTACAGATTCTGCCTTTTTAGCACCAGTAAAGATTGTCCTTTTGCAGTAAAAGTGTAATTTTCTTTGTGTCTTTGCTAGTGTGCCAAAAGTTCTATATAGGTTGAATGTGTGGTGAATATTCGGAATGCCTGTTTCTCTATATAGTTAATTTGGCATTGAGTTTCTTTCTTTTCCCTTCTTTTTGGCTGTGCTGGGTCTTCGTTGCTGCATGGGCTTTCCTCTCATTGTGGAGGGTGGTGACTGCTCTCTAGTTGCCGTGTGCGGCCTTCCCACTGTGGTGGCTTCTCTTGCTGCGTTGACCATGGGCTGTAGGACACCCAGGCTTCAGCAGGCTTCTATGTCGTGTGGGCTCGGTAGTTGCGGCTCCTGGGCTCTAGAGCCCAGGCTCAACAGTTGTACCACATGGGCTTAGTTACTCCACAGCATGTGGGATCGTCCCGAACCAGGGGTCAAACTCGTGTCTTCTGCATTTTTACCACTGAGCCACTAGGGAAGTCCGAGCATTGTTTCTTGAGACAGTTATTAACATGTAAACACTATCTGTAAATCATAAAAAGAAATAACTGGTGTGAAATTTTTTTACTATAATGCTCATGTTTATTGAATTTATAACTCAGTATTGGTTTGATCATCAGTTTCTATTTTGCTGTGCCTGAGATTAAGATCTGCATGTGTGTGCATGTGTTTAAATCAGGAAAGACTCCTTTTTAAGTGGTAAATGCAATTTGTTAATGGATCTCAGATCATTTGTAACTTCATGAGTGATTTATACAAAGAAAGTTCTATTTGAAGA EMBV3_15538 TGAGAAACGCATCGTGATCACAGGAGATGCAGATATTGATCATGACCAGGCGCTGGCCCA Gene GeneID:538959|EPB41L2:XM_002690221:10_cdna UTR3_Alt 2 NULL GeneID:538959 9 GENE EPB41L2 NULL erythrocyte membrane protein band 4.1-like 2 EMBV3_13157 AGGATTCCCTTGCTGAACGCCACATCAAAGGTAAATGTATTTGTGATGGGGATGACCAAG Variant GeneID:525480|SLC16A4:NM_001101123:128_cdna 159^271 1 EMBV3_06743 GeneID:525480 3 GENE SLC16A4 MCT5 solute carrier family 16, member 4 (monocarboxylic acid transporter 5) EMBV3_35514 ATTTGGACAGCCCACCTGAATATAACATTTCAGGGAACGGAAAATATAGTTGCTGTGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23675 CCAGTGGGCAGCAGTTACAGAGACAAAACTCGGCTACAGAAAGAGAACAGGGCATTGCAG Gene GeneID:515386|UBE2CBP:NM_001075711:50_cdna Constitutive 0 NULL GeneID:515386 9 GENE UBE2CBP MGC138919 ubiquitin-conjugating enzyme E2C binding protein EMBV3_18689 GGATAAGAAACTTTCGGCTTCTCCAGTGTCTCATATCCCCCAGTGTTCTTGGTCCACGAG Gene BVV0102_161791 + 0 NULL GK000022.2:15451286-15452030 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128034 TCONS_00128030 TCONS_00126209 TCONS_00128033 TCONS_00128031 TCONS_00128032 TCONS_00126208 TCONS_00126207 2 XLOC_077810 XLOC_077390 Coding TCONS_00126209 XLOC_077390 NonCoding Coding KBTBD5 22:15449290-15451905 o TSS94732 803 1 TCONS_00126209_1 123 2 0.693573068094874 3.38805659564275e-05 0 4.10991130891529e-05 0.000162104202344103 7.34583608005655e-130 0 4.56861745623604e-31 1.81553250572438e-35 5.74399409624913e-14 0.00174901856374796 0.00201471917195495 0.000296418479869163 0.000519846040927377 0.00544146842252635 0.000472388719354248 0.00827252299234289 0.00467864266025818 0.0101031028266624 2.456593469132e-05 5.12237914933779e-05 2.95893648304955e-05 0.00233449675536723 0.00281926583040396 0.00375636344519158 0 0 4.31952126653652e-05 0.00156501465125211 0.00140175731470503 0.00107636773005147 NM_001015598.1 KBTBD5 Bos taurus kelch repeat and BTB (POZ) domain containing 5 (KBTBD5), 4e-11 73.4 100.00 0.0485678704856787 NM_152393.3 KLHL40 Homo sapiens kelch-like family member 40 (KLHL40), mRNA. 7e-84 315 73.78 0.699875466998755 0 noncoding 1 0 0 0 -0.811041041661712 0.173277893795508 0.1318475439412 0.0899366094326862 GTGAGGCTGGGAGGTCATTTATTGAGGAACTGTTGAAGTTAGGTAGGAAAAATGAGGGTCCACTTAGAACATGTGGATGTGAGGTGCTTGGGTGTATCCAGGAGGAGCCTACTGGGGCAGAGAAAGGGCTGAGCTGGGGGGACGAGAAGAAGTGGGAGGGGGTCCTCCGGGAGATCGCCTACGCTGCTGGCGCCACCTTCCTACCTGTGCGGCTCAACGTGTTGCGCCTGACCAAGCTGTGACCTGCCCAGAGGGCCTGAATGTGCCCTGTCCCCTATGCTGCAGACCACAGAGGCCTGGCCTTCTGGGTGGGGACTCCAGGGAGGAGTCCCTAGCAGAGGAGTTTGGCAGAGGCAGAGCCCACCTGGATCCCATCCCATCATGGTGCCCCAGGGACTGCTTCAGCTGGGAAAGGGAAATCGGTGCCCAGTGCTGGGGCTTCGGGCAGGGATAAGAAACTTTCGGCTTCTCCAGTGTCTCATATCCCCCAGTGTTCTTGGTCCACGAGGCAGAAGCTCATGGGGTGTCAGGCTGCACCCTGGTCCAGCCCCAGCCTGGCCGTGTGCCGGTAAATGCCCCACAGGGCTCAGCCTCCTCGCCTGTCAGGTGGGGAGCAACTCTATCGAGTGCACCTTGCAGCCTGAGTAAGTCTCCTCCTGTGAGAAGAATAAAGTGCCTTCCGAGCAAGCAGCTCAGAGTCTGGGATGAGATGCTCCAAGCAGCAGTGACCAGGTGGTTTGAAGGCCTGGGGCTTCTTGTGTTCAGCTGCTGGGCTGCCAAGGTCGGTGGCCTTGGCCGTCCAT TCONS_00128033 r 5' 0 TCONS_00126206 TCONS_00126207 TCONS_00126208 s 5' 801 EMBV3_32878 AGACTGTGGCAGAGCTGTTCAACGTTCCTCTTCTCAGAACTGTTTGGGAGTGAGCACCTT Gene GeneID:510311|OSBP2:XM_002694626:89_cdna Constitutive 0 NULL GeneID:510311 17 GENE OSBP2 NULL oxysterol binding protein 2 EMBV3_25763 TTCTGCTCAAGCCGCTTCCTGGATTTCCTGCTCATTCCGTCCCAGATGATACAGTCACAA Gene BVV0102_317456 + 1 EMBV3_03825 GK000019.2:32426348-32695684 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40777 CCCGAATCCTGCGCTCAAGGCGTTCCCCTTTACTCAAATCTGGGCCTTTCGGCAAAAAAT Gene GeneID:527854|KIF20A:NM_001046288:34_cdna Constitutive 0 NULL GeneID:527854 7 GENE KIF20A MGC137152 kinesin family member 20A EMBV3_25609 AAAGTCATTTCACAAAAGACATTAGAAAAATTAAAATGACAACTAATTAATGTCCATAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39031 GATTGAGAACACAATGTTTATCAACAAGATGCGGATGCTGGAGTCAGGGCTGCCAGAGAT Variant GeneID:515007|ZNF384:XM_002687868:115_cdna 400^900 2 EMBV3_31500 GeneID:515007 5 GENE ZNF384 NMP4 NP zinc finger protein 384 EMBV3_43183 TCTCACAAGACTTTCAGGATCAAGCGATTCCTGGCCAAGAAACAAAAGCAGAATCGTCCC Gene GeneID:100295381|LOC100295381:XM_002690978:245_cdna Constitutive 0 NULL GeneID:100295381 10 GENE LOC100295381 NULL similar to ribosomal protein L39 EMBV3_32997 GAAAGGCGATGAGCAGGGTCTTGTCAGCAGGGAAGGCGTGGAGTCCTTGCATCTTAAGTA Gene BVT0102_149366 + 0 NULL GK000003.2:70997131-72477186 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170250 TCONS_00170252 1 XLOC_103544 NonCoding TCONS_00170250 XLOC_103544 NonCoding NonCoding - 3:71421476-71423236 - TSS127264 528 1 TCONS_00170250_1 94 0.653409090909091 2 0.700966458214895 0.000979195600208523 0.000418683510631972 0.000440297792178749 0 4.99487382869111e-08 3.17566834047866e-08 0 0 6.77605679820721e-08 0.000101248067535329 0 0 2.59442921279522e-08 0 0 0 0 0 0.00172482427572477 0.000177057841243356 4.59886301453764e-05 0 0 0 0 8.33519656534463e-08 0.000508791661144921 0 0 0 0 noncoding 0 0 0 0 -0.0627217787071313 0.581748742225115 0.00207273654615031 0.970253536368176 ACTTCTGGCAAGAAAAGTTTAATCAATGGGATAGCTGAGACCTGCACCATCCGTACAATGAACAACCCCAAAACCAGCCTCCCCAAAGGCCCCCAGATAAGGCCCATTGAAACCAGAGAGCTATATCCTGACCAAAATTTGAAGATTGGTTTCTCTGCCTGTCGGGACTACTGGGAAATTTCAGTTTCACTTGCTTGTAGGGTGCAGGGACCTTGCCCCCTGGTACTTCAGACCAGGGCTCTTAGTGCAAAGCGGATACACCCAACTGACTCTTCAACACAAAAATGTGGTGGTGAGCTGTCTGCAGAAATGCTGCACCTCTCACACTGCAATCTGGAATAAGAGCTGTGAGCAATGAGGCTGTACCAAACTTGCAAGAACTCCACTCCTTCCCCACTGACTAGATCCTTATGAAGCTGTTGTACCACAGCTGTACTTAAGATGCAAGGACTCCACGCCTTCCCTGCTGACAAGACCCTGCTCATCGCCTTTCCAGGAGAGCTTGTACTCTTGAGTGCCAATGTGCAC TCONS_00170246 s 3' 424347 TCONS_00170246 s 3' 424347 EMBV3_25964 ACACATGGATATTCCAGTCCAAACAGTTCATTGTGGGATTTCTGCCTGCCAACAGATGTG Gene BVT0102_301651 + 0 NULL GK000006.2:71196414-71279031 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18774 AGAGAAGGTGCAGGATTCAGCCGGACAAGGCCGAGATCTCATAGTCACTGATGGAGGTGA Gene GeneID:100297127|LOC100297127:XM_002694336:68_cdna Constitutive 0 NULL GeneID:100297127 17 GENE LOC100297127 NULL hypothetical protein LOC100297127 EMBV3_31741 AATTCAGCTTGGGTTCCCCGCTCCTCCAAAGCGGAGGTTAGAACAGCCACCGGCAAAATC Gene BVT0102_162620 - 1 EMBV3_29885 GK000013.2:64069301-64213311 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27063 CAGCTTTGGCTTCCCCAGACCCCAGCAGGCGGACTATGGGACCTACTGCTACTCCGAATA Gene GeneID:514791|HAPLN2:NM_001075684:144_cdna Constitutive 0 NULL GeneID:514791 3 GENE HAPLN2 MGC139652 hyaluronan and proteoglycan link protein 2 EMBV3_40812 GTTTCTATGGTAGATCGTTGGCCAGAGACAGGATATGTGAAGAAGCTTCAGAGAAGGGAC Gene GeneID:617353|MEIG1:NM_001114524:157_cdna Constitutive 0 NULL GeneID:617353 13 GENE MEIG1 MGC133537 meiosis expressed gene 1 homolog (mouse) EMBV3_18909 CTCATATCCAGCATTTGAAAGGAGCACACATTAGGTGTTGGGAGTGGAAACCTGCGGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05840 TGGCTGGGAGTTCATGTGGAATGAGCGTCTGGGATACATCTTGACCTGTCCGTCTAACCT Gene GeneID:281692|CKMT1:NM_174275:124_cdna Constitutive 1 NULL GeneID:281692 21 GENE CKMT1 NULL creatine kinase, mitochondrial 1 (ubiquitous) EMBV3_13670 GCTCTAAACCCGTTATTGAAATGAAGAGCCCCGAGGATGGAGGTATCAGGCTGGAGTGTA Gene GeneID:617928|BTN2A2:XM_002697557:354_cdna Constitutive 0 NULL GeneID:617928 23 GENE BTN2A2 BTN2A1 butyrophilin, subfamily 2, member A2 EMBV3_30670 TCTTTTATAAATTACACCCAGCTCCCCACAACCACTGCACATGCAACCCCCCTCATACCC Gene BVV0102_219760 - 1 EMBV3_40502 GK000009.2:25018747-25263751 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236828 1 XLOC_144583 Coding TCONS_00236828 XLOC_144583 Coding Coding CENPW 9:25262819-25279967 j TSS177197 2276 2 TCONS_00236828_2 88 0.358084358523726 3 0.867440368577594 0.00423676342625689 0.00453133022118881 0.00405304166869909 0.00248650389196677 0.00216283864059998 0.00102132886547079 0.00171780551069347 0.00253561044939232 0.00314477902046386 0.00108159484443882 0.000466809114084615 0.000365534658078465 0.000575843585611276 0.0012015829121612 0.00110828723827837 0.00454700774768359 0.00134150031140356 0.00447098104185469 0.00612908350641936 0.00659286691944417 0.00198567358661866 0.00126476414301952 0.00391848693095987 0.00494981239953836 0.00554292571576883 0.00497613009644599 0.00510455238442778 0.000837522087498147 0.000832857867609459 0.0014187427123553 NM_001111261.1 CENPW Bos taurus centromere protein W (CENPW), mRNA. 0.0 1725 99.79 0.422671353251318 XM_005266966.1 CENPW PREDICTED: Homo sapiens centromere protein W (CENPW), transcript 0.0 720 71.46 0.585237258347979 TCONS_00236828_2 sp|Q5EE01|CENPW_HUMAN CENPW_HUMAN Centromere protein W; 3e-48 152 86.36 0.988636363636364 1 noncoding 0 0 0 0 -0.0266114777631469 0.926965427598456 0.0307861385587064 0.786836352900664 GTGAAAAATATTAGCTGCTAATATTAGAAAATCAAGCCCTGTTAAGAAGGCATTGGTTCTTTAAGAAGCCTGATAAAACATGACAAACTTCTTCTATTCATCTACTTTTTCGTTCATTGGTCTTAGGCTCAGTAGAGAGTGAAAGCTGGGACAGTAAGCGTGACTGCCTTAGCATACCAGCATTTTCCACAAATTTCCAACATCTTTATGGCACACTGGAGAAATCGCTTCCAACAGCTACTTAAGGTGAAACCCGCAACCCTCCCCGTCTGTGACGTCATGGAACGCCCACCAAGGGTGTGTTCCACCAACATCCGGGCGCCAAGGGGCGGGTTTGCGCGCCCCTAACGTCACTACCGGGCGCCGGGCGCGCTCTGTGGCGGCAGATTCAAACGTTCCGGCCGGGGTCTCGGGACCTGTGGGAGCGTCTGAGTCGGGGTTCTTGGTGTACTCGCTGGCGTGAGCTCTAGTGCTGCGCAGGGAAGACCCAGGAAGTTGAGGCGGCTGCTGCCAAAACCCGAGGGTGAGAATGGCGCTCTCCACCACGGTCTCGCAGAGGAAGATGATAAGGCGCAAGGCTCCTCGCGGCTTTCTAAAGCGCATTTTCAAACGACAGAAGCCTCACCTTCGTTTGGAGACGAGTAGCGACCTACTGGTGCATCTGAACTGTTTACTCTTTGTTCATCGATTAGCAGAAGAGTCACGGATAAATGCTTGTGGGAGTAAGTGTGGAGTCATTAAAAAGGAGCATGTACTGGCTGCAGCAAAGGTAATTCTAAAGAAGAGCAGAGGTTAGAAGTCAAAGAACACATATTTGAAAATTGTATGATGTATTATTTTAGGTGGTAACAGATCATGAAAGCACTTTTTATAAAGTAGTTAATATTGTGTATTAAAACATTGGCTAGTTGAAGGATGTGTGTATTTGTATGTTTTTTGCTATATTGAAATATCTTATACATGTAGAACTATATAATCTTTGTTTTTGAGGAATTATTTCAAGTTCATTTTACTTCCCTTTTGTTGGTATTGCAAATGTTTTACATATCATAAATGAAATCTTAGTGTATGAAGTAGCTTGAAGAGATGTATTTCTTAGAATTAGGTTTATAAGTATTTAGATGTACTCACTGTTAATTAGGGAATCAATTTAATCTCTGAAGGAAGACAATATACAGTCAAATTTTAGATACATTTTAAATATTTTAACTGTTTAATACCTTTTCATAAGCAAAGCAGTCTGCTTTTATATTAGGCCAATAGTATACTGAAATAATTTCTTGACTGTAAACACCAGCAGAGTGTTTTTAAAACCTATTTCTCTTCAAAACCAAAAAAAAAAAATTACAGAGCAAACAGACTGATTTTCTTCAAGTCACACATTTAATAGATAGGCGTCTGTTCCCCCAAGAAATCATTTATTGTGTATCATTTAATAGTTGTGTTTTTACATTTTGTTTTTAAATAATTATACATTGCAACGTGAAGTTGCAAAGGTAGTACAGAGAAGTCCCCTGTACTCCATACCCAGTTTTATCCCAATGTAAATAATTAGAATACAGTATCAAACCCAGGAATTTGACTTGGTACAATATGTGTATAATTTTGTACCATTTTAGTACGTTTGCAGATTTATGTAATCACCACTCCTATCAAGATATAGAACTATTTCATCACCACAAAGTTCTCCATCATGCTTTTCTTTTATAAATTACACCCAGCTCCCCACAACCACTGCACATGCAACCCCCCTCATACCCCTACCATCTCTAAGCCCTGGCAACCACTAATCTGTTCTCCATCTCTATGGTTTTGCCATTGTGATGGAATCATACAGGTTTTGACTTTGGGGAATTTGATTTTTTCAGTTGTCTTAACTTTCTTGATCCTCCAAGTTGTTGCGTATAGCAGTTTGTTCCTTTTTTACTACTGAGTCATCCTATTCCCTGGTATTTATGTACCATAGTTTGTATAGCTATTTACTCATTAGGAATATTTTGATTATTTCTAGGTTTTTTTTGGTTATCATAAATAAAGCTGTTATGAACAATTGTGTACCAGCTTTTATGCAATTTTAATTTCACTGGGATAAATACCCAGGAATATTATTGCTACTGGGTTGAATGGTAAGTATATGTTTCAGTTCAGTTCAGTCAGTCAGTCGTGTCTGACTCTTTTCAACCCAATGGGCACACCAGGCCTCCCTGTCCACCAACTCCCAGAGCTTGCTCACACTCATGTCCATTGACTTGGTGATGCCATCCAAATGTTGTATC EMBV3_36858 CAGTTCATGAGATTCACATGGCAAGTATACTGGGGTGGTTTTCCATTCCCTTATCCAGTG Gene BVV0102_098150 + 0 NULL GK000012.2:42606303-43992939 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00073284 TCONS_00251398 2 XLOC_045049 XLOC_154339 Coding TCONS_00251398 XLOC_154339 NonCoding NonCoding - X:62571505-62571723 - TSS188619 218 1 TCONS_00251398_1 37 0.972477064220183 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00169615959524226 0 0 0 3.2988159304372e-05 0 3.4039661827111e-05 4.20828414788918e-05 0.000384509336215916 0 0 0 0 0 0 XM_871192.5 C23H6orf222 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf222 (C23H6orf222), transcript variant X3, mRNA. 1e-17 93.3 89.04 0.325688073394495 0 noncoding CCTTGGGCAGAGGAGCCTGGCAGGCTACAGTCATGGGGTCACAGAGAGTCAGACACGACTTAGCAACTGAACCATCACGACCACAGTTCATGAGATTCTCATGGCAAGTATACTGAGATGGTTTTCCATTCCCTCTTCCAGTGGATCACACTTTGTCAGAACTCTCTGCTGTGACCTGTCCATCTTGGGCAGCCCTGCATGGCATAGCTCATAGCTTC TCONS_00247152 TCONS_00247153 TCONS_00247154 TCONS_00247155 TCONS_00247156 TCONS_00247158 . 5' 19659 TCONS_00247152 TCONS_00247153 TCONS_00247154 TCONS_00247155 TCONS_00247156 TCONS_00247158 . 5' 19659 EMBV3_09282 GCCCAGGGCAACGTTGGACCCCCTTTTACTTTGTAAAGTTTGTATTTATTCCCCTTTAGG Gene GeneID:510245|PPP5C:XM_002695101:560_cdna Constitutive 0 NULL GeneID:510245 18 GENE PPP5C NULL protein phosphatase 5, catalytic subunit EMBV3_41310 CCTGAGGATTCATGCCTTCTTCTGCCTTCTGGGTTTTGCTGGATTCATTGGTCCTGCCTG Gene GeneID:535232|KRT86:XM_002687253:97_cdna Constitutive 0 NULL GeneID:535232 5 GENE KRT86 NULL keratin 86 EMBV3_02583 AGGTTCATTGAGGAAACCAAGGGAACTGAGCCCCAGGATAAAGACTCTATTAGCCTTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20462 CGAGAAGATATTTACAGCTCTGCAAAGAAGACTACAAAGGCATTTCTTCCTGAGATGATG Variant GeneID:527592|HSD17B11:NM_001046286:22_cdna 464^595 1 EMBV3_43391 GeneID:527592 6 GENE HSD17B11 MGC137132 hydroxysteroid (17-beta) dehydrogenase 11 EMBV3_04443 AGACCTGGGTTCTGAGTCTTGTGTATCATGTGGGCTTTGTTAAACATTTGCCTTCGAGCC Gene BVV0102_233292 + 0 NULL GK000001.2:138071196-138139497 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16597 CTGAAAACGGCATAAAGTGAAGATCGACATTAAAATGAGGTGAAAGAAAACTATAGTGGC Gene GeneID:539955|LUC7L3:NM_001034684:156_cdna Constitutive 0 NULL GeneID:539955 19 GENE LUC7L3 CROP MGC129101 LUC7-like 3 (S. cerevisiae) EMBV3_06894 CTTTTAGTAGTGTCATCCAGGAAACTTTGAAGAAGTATATTTGTTAATCTGTGGCTTGAG Gene GeneID:516539|NANP:NM_001105377:5_cdna Constitutive 0 NULL GeneID:516539 13 GENE NANP NULL N-acetylneuraminic acid phosphatase EMBV3_35633 TGTGGGCTCCTTGTACACAGCCAGAACCTTTCCTGGAGGGAATTTATGAAACAGCACCAC Gene GeneID:100296953|LOC100296953:XM_002690657:210_cdna Constitutive 0 NULL GeneID:100296953 10 GENE LOC100296953 NULL similar to human epididymis-specific 3 beta EMBV3_32122 AGTATTACTGATAGTTGCACTTGACTGCAGTTCTGTGAGCCTTGAGCATTCATACACCTC Gene GeneID:539332|CFL2:NM_001076154:41_cdna Constitutive 0 NULL GeneID:539332 21 GENE CFL2 MGC140740 cofilin 2 (muscle) EMBV3_42366 CAACATGCCACAGTATATCCTAAGAGAATTCAAGGTCACAGATGCCAGGGACGGGCAGTC Gene GeneID:532751|PTPRD:XM_002689593:5_cdna UTR3_Alt 2 NULL GeneID:532751 8 GENE PTPRD NULL protein tyrosine phosphatase, receptor type, D EMBV3_22717 CCAATCAGCGTAAGAAGAGAGGAAGTGACAGAGCCAGGTGGAGCCAGAGAGCCAACTTTA Gene GeneID:515706|TDRKH:NM_001105375:103_cdna Constitutive 0 NULL GeneID:515706 3 GENE TDRKH MGC159829 tudor and KH domain containing EMBV3_02846 CTGTGGGCCTCATGAAATCAACCACTTCTTCTGTGAAATCCTGTCTGTCCTCAAGCTGGC Gene GeneID:515772|LOC515772:XM_002687127:484_cdna Constitutive 0 NULL GeneID:515772 4 GENE LOC515772 NULL similar to olfactory receptor, family 2, subfamily A, member 5 EMBV3_43122 GAGGGTGTGGCGGGGAAGCACTGATAACATTTGGGATGTAAAGACACTTTGTATCTGAAG Gene BVV0102_148054 + 0 NULL GK000003.2:95288436-95389091 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003683 TCONS_00003682 TCONS_00003684 TCONS_00003685 1 XLOC_000897 Coding TCONS_00003685 XLOC_000897 Coding Coding KPNA1 1:67471984-67545120 = TSS1871 7222 1 TCONS_00003685_4 538 0.0704790916643589 14 0.901442537772612 0.000118037428153753 4.35406966170209e-05 0.000130327858537364 8.42368643563271e-05 6.12739257643813e-05 1.92789431667603e-05 9.9552920222878e-05 2.83252490791555e-05 0.000126104348512162 2.36366189037636e-16 2.02152512691895e-05 5.9554904986992e-15 5.67523141582892e-05 1.17253776869429e-12 3.39348845081518e-08 0.00142379903567775 1.99744068235597e-05 0.00109259055052322 4.17113998937409e-05 5.34000051193488e-05 1.59991538183857e-05 0.000541039710937845 6.44910501700579e-13 0.000320723620914312 0.000177332474447934 6.15907486623355e-05 5.30993078759703e-06 3.13769747236997e-17 5.05022383598028e-05 2.82260674934924e-05 NM_001081733.2 KPNA1 Bos taurus karyopherin alpha 1 (importin alpha 5) (KPNA1), mRNA. 0.0 4845 99.96 0.372334533370258 NM_002264.3 KPNA1 Homo sapiens karyopherin alpha 1 (importin alpha 5) (KPNA1), 0.0 6204 84.80 0.763361949598449 TCONS_00003685_4 sp|A2VE08|IMA5_BOVIN IMA1_BOVIN Importin subunit alpha-1; 0.0 1113 100.00 0.99814126394052 5 coding 0 1 1 1 0.0698819619724526 0.632163881439624 -0.00104636046986026 0.986492700199275 CGGCCCCCGCGCGCAGGCGCACTGCGAACGCCGGCTGAGCTAGGTCTAGCTGTGCTTGGTGCGCGGCGGCGGAGGCGACGAGCAAGGCCTGGTGAGCGGCGCGGAGAGAGAGCCAACTCTTTCGAGGTTGTGTAGAAGACGCACGGCAGGCGAGCGAGCGAGGCGGAGGCTCATCCCAGAAGTGGCACCGGGATCGGTTGCCTTGAACCTGAAATCATGACTACCCCAGGAAAGGAGAACTTTCGCCTGAAAAGTTACAAAAATAAGTCCCTGAATCCTGATGAGATGCGCAGGAGGAGGGAGGAAGAAGGACTACAGTTACGTAAACAGAAAAGAGAAGAGCAGTTATTCAAGAGAAGAAATGTTGCTACAGCAGAAGAAGAAACAGAAGAAGAAGTTATGTCAGATGGAGGCTTTCATGAGGCTCAGATTAATAACATGGAGATGGCACCAGGTGGTGTTATTACTTCTGACATGATTGAAATGATATTTTCCAATAGCCCAGAGCAACAGCTTTCAGCAACACAGAAATTCAGAAAACTGCTTTCAAAAGAACCTAATCCTCCTATTGATGAAGTCATCAGCACACCAGGAGTAGTGGCCAGGTTTGTGGAGTTCCTCAAACGAAAAGAGAATTGTACACTGCAGTTTGAATCAGCTTGGGTACTGACAAATATTGCTTCAGGAAATTCTCTTCAGACCCGGATTGTGATTCAGGCAGGAGCTGTGCCTATCTTCATAGAGTTGCTCAGCTCAGAGTTTGAAGATGTCCAGGAACAGGCCGTCTGGGCTCTTGGCAACATTGCTGGAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATTCTTCCCCCTCTTCTGCAGTTATTTTCAAAGCAGAACCGCCTGACTATGACCCGGAATGCAGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGCAAAGGTTTCCCCTTGTCTGAATGTGCTTTCTTGGTTGCTATTTGTCAGTGACACTGATGTACTGGCTGATGCCTGCTGGGCCCTCTCATATCTATCAGATGGACCCAATGATAAAATTCAAGCAGTCATTGATGCAGGAGTATGTAGGAGACTTGTGGAGCTGTTGATGCATAATGATTATAAAGTGGTTTCTCCTGCCTTGCGGGCTGTTGGAAACATTGTCACAGGAGATGATGTTCAGACACAGGTAATTTTGAATTGCTCAGCTCTGCAGAGTTTGTTGCATTTGCTGAGTAGCCCAAAGGAGTCTATCAAAAAGGAGGCGTGTTGGACAATATCTAATATCACAGCTGGAAATAGAGCACAGATCCAGACTGTGATAGATGCCAACATTTTCCCTGCCCTCATTAGTATATTACAAACGGCTGAGTTTCGGACAAGGAAAGAAGCTGCTTGGGCCATCACAAATGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTTGTAGAACTGGGCTGTATCAAGCCACTCTGTGATCTCCTCACAGTCATGGACTCTAAGATCGTACAGGTTGCCCTGAATGGCTTGGAAAATATCCTGAGGCTTGGAGAACAAGAAGCCAAAAGGAATGGCACTGGCATTAATCCTTACTGTGCTTTGATTGAAGAAGCTTATGGCCTGGATAAAATTGAATTCTTACAGAGTCATGAAAACCAAGAGATCTACCAGAAGGCCTTTGATCTTATTGAGCATTACTTTGGGACCGAGGATGAGGACAGCAGCATCGCACCGCAGGTTGACCTCAGCCAGCAGCAGTACATCTTCCAGCAGTGTGAGGCGCCTATGGAAGGTTTCCAGCTTTGAAGCAGTCTCTGCTTTCATGTCCCTGTGTCAGCCCAGGCTGCCCAGTCAAGTCCTCTGTGGAGCCCACAGTCCTCATGGAGCTAACTTCTCAAATGTTTTCCATAATACTGTTTGCGCTCATTTGCTTGCCTTGCGCACCTGCTCTCTTACACACATCTGGAAAACCTTTGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAATAACCAGAACGGCCCACTCTGTTATGGAAAACCCTAGGCTTTCGAGATCCGCACTTACATATTATAGAGTCATGGGAATATGCACATGTTAATGTGGCTCCCTTTTTTTTTGTGGGGGAAAAAGAGGACTCCTCATTCCCTTTAATGTGGGAAAAAATACTGACATTAAAAGATGAGACTAAATCTTTACTTTGAATTTCACACAACTGCTTGCAACAAGGGAAATGTTTAGACCTGTTGTGTACTTCAGAGTACTTTCAGGAGTTCCTCCACAGTGAACCCTTGGATTAACTGGTGGCTTTTTCTAGCCACATTTGCATTAATCCTTACTGAGATTGGATGGTTTTATTTCCTCTATTGATGCCATTCTCCACAGATAGTAAACCATCCGCTCCCTCACCTTCAGCCTTCAGTGAATGTGCTTCTAGTTGTCAGGAATGCTGAAGAATTAACTTTGACTCTTAAATGTGATACTGGTTTGAAGATTCCCTTAGAGCAGAAAGGAGAGGGGCACATATTAATTTGTATGGCTATTGCTTCTCTTTGGTCTTACATGTCTTAGGATTTGGAAGTGGTACAGTTCTAATACTGGTATGAAGATTTAGAATCCTTAGTGATCAAAACCGTATCCTGTAATTCAATAAAAAAGTTAAAAACAGAAAAAAAAAAAAACCCTCTAATTTTCCCAAACTTAACCAGTGTGACTAGGGCTGTTTCTGCATTAAAACAAATGTTTCAGGCTTTGTGGTCCTGATCAAGGTCCTCATTAAATTGGAGTTCACCCTAGGTGCTGTTCCCTTCTGTGACTGGCAAATAAATACGCTTCTAAAGGTTACTTAGGGATTATTTTTTTTCCTTAGTTAGGTGCAGCTGGATTCTAGTGTATTCATGCTGCACATAAGTAGCATCCTTATTTTCAATGACCATCTTCTGGACAGACCTGTTTAACCCAAATAAGGGCAGTGATCTTTTTCTTATGACCTCATTGTTCCCTAATCATTTCATCTCCTACTAGTACTGCCCAGTCAAGTCCTTTCCATAAAATAAAAAGTTTCTACCTTCTGGCTCATTTAATGACTACAACCTCTACCTGCAAATGGCGCTTCCAGTACTGTCTTCAGTGATCCACATTTGTGCTCGGACTGGAATGAGAAAAATAAGCTTAATTGCCAAGAGAACTGCAACTGAGTTCAATACGATTTCTTGGTGCTAGTTGGCCATCTTGACTCAATGTTGGGACATATTATCAGAGAAGATTTTTTGTTGATGTGCTGTTCAAAATGAATTCTGAAGGAAAGTTGCTCAGTTCTTTTTCAGAGAATATCCTTTTAAACCTCTTTAATCTTGTCCTCTTCTAGAATTCATTATAACCCCAAAGTGTAACTATTTGAAAGTTCCCCTGACAAGCTGTTATATCTCTGGTAAATCCTGCTGAACATTAGGGATATTCAGAGCTTTCATACCTCATCATGTTGTTTAAACCACCAACTTACGTGATCTGATTTAAACTTTAATAAGAAATCCACTTCATTCAAAATAGAAAGATACAAAGACAACATTTATCAGCCAAGTGTGTGACGCATTCTTCGCATCTAGTCTGTAGTTGTGTCTGTGCTCTGGAATGGATACCGTCTGCTGATGTCTGTTACTGATGGAGCAGCCACTGCAAAACTAGTCAACTCCATCTATAACTGTTACTTTTTCTAGTGCTGCTTTGTGCTGAAAGAACATTTTAGTTTACTGCACTTGACCTGTAAAAGACTTTCTTTGTAATTTTAGGGACAAATTAGGTGGTTAATTTAAAGAAAAACTTTCAATGTTGCCTTTACATCACATTAAAATATAACTTCTTTCAGAAGGGTAATAGAAGCACTGAATGATAGTAAAACTCTTGTTTTTAGCTTTGACATTTTTTGTGGCTGAGTTTTTTTAAATTGTAAATTACTGGTAACATCATTTCTCTAGGATGTTTTAAATCATGTCCCTTCTATTGGATAATTTTAAAAATTTCATCTTGTTTTGATAAATCAATTTTAACGGAAAAAATATAAAACGAAGTTTCCCCAAATTAGCAAGCAAAGCATACACTGGGAATTTTTGTTAGCAACTGCAGGTGTCTCAATGAATGAAGTAAAACAAAATCCATTTAACTAATGTGGTCTATTGTCTGTCTGAAACAAGAGGAGTTTATCTTGCTCTGTCCTAGAAGTTCGTGAGCCATGAGATAGCTAATTTTTTCTTGCAGTTAAGTTTTTAAAATATAAAAGTTGGAATTGATTAAAAGTTAAATCCCATCATAACTGTTGGAATTGATAAAGCAGCCTTTTTAGTAACAGAGGGACATTTTAGAAGGTAGCTGTTAAAAAGTCCTGTTTTTAGTTCTCTACCTGGCAGATTGTGTTAATTTACTTTCACTGAGATGTTAGTCATTACAAAAGCATGCTAATTTCAACACAGGAAAACTCTTCTGCAGTTTTATATACCGCTCTGGGGGAAAGTGGCTTCATTTTCCTTTCTCCTTTTTTATTTCCTCCTCTAAACTTTCAAAGTGTATTCTTTGAAATGAGAACTTTATTTGGGGGGGAGGGTGTGGCGGGGAAGCACTGATAACATTTGGGATGTAAAGACACTTTGTATCTGAAGGATCAGCAGGTAGATATGTGTTAGACTGAAAGACACCTAGAAAGGTAAAGGTGATAGGTATGAAGAATGTGAGATTTAGGAGACACAGTTCTCCATGGAACACTTCATGTTGTCACTAAGTAATTAGAACCTTTTTACACTTTGTCAGCTGTACTGTTTTTGAAAATTCTGTTGCCCTAGGATTGTACCTTCCATCTGCCAGATAAAGCTGAATGGACTCTGGGTTGATTTTCATCGTTATTGTCACAGATAAAAACTTTTGACAGTTACCCCATAATAAATCTGAATTATCCCAGATTGTTGCTGATTTTGCATAAGAAAAAATATGTTGTATATTTTATTAAGCAGACTTTGTCAGCTATCCTCTGTTGTACATGGCCACCCACGGGCAACTATGAATTTACTTCTCCAGTGCTAAATAAATATTTCAGTTATTTAACCCCCCCAATTTGAGGTTGCATTATGAAAGTTTTCCTCAACTTAAAGAATTTTTCATTTTGTGAACATTTTAATATCAAGAGGCAAGTCATTAAAGGTATTTAAGGGCTTGGGACTTTCTGCATATATTGGAAATTGTGATGTCTAAGGGTGATTTTCAGTAAAGAGGGGATCCACTTGTAGGAAGAAGTATTATTTGCTTTTCATATTTACTGTGTTCTACCTCCTGCATTCCAAAATTTGCTCAGACAGGTGTACCTATTGTGGAAGTCTCATCTGAATTTTTTTGCCATCTGAAGCTGTTAGCTTCTGTTAGAACCATTTTTCTTCTATTATGAGGTAAGCAGAGTAAATATATCTACCCAGTTGAGAAATATTCGTGGCTACCTTTTTCTGTCATCAGAAGTTAAAAACTTTATACATGTGTGTGTATATTTTTAAAGTAATTGAAACCAGATGTGGCACTCCTAGTCCAGGAAGTCTGCTTTGATTTGGGTAGTATTCTGTAACATGCTTTATTGTCAGGAAAAGGCAGTAACAGTGGGTACCAGAGCAGCATAAAGGTGTGATAAAACAAATACCACTGTATGCTGGTTTTTAAAATGTCAGATTGCTACTGGACATAAAACTCATCTGGAAGTTTGGAGTAAGGAGAAAGGATTAAGGGTAGATGAAGCTCCATTCTGTTTTCAGCTAGGAGTAGACAAAGAAATCCTAGCCTGTTTTCTTACAGGTCAGATAAAGGGAACTCATCTTTATTGGAACCTCTCTAGTCTTCCAGGTGCCTGGTTAAGGACTTTCACTTTTTCTCATTTAATCCTCATTTTATCCACCTCTTTGAGGTGGATAATTTGTCATTATGGTGACAAAATCAAGACTTAGGAGAATTTACTTTGCCTCAAGGTCACAACCCTTAGACACTGTCCAAAGGTGGGGGAAAGCCCTGCAGTTTGTGTGTCTTGAAGAAAGCAGCAGTCACAAGTGTTCTGTGCCAAGAATTCCCAGAACAGGACACTGCGGCCACAGCTGGGCCAAGTTACTTGTTTTGTCGGGCCATTCTTTCTTCTTATCAGCACCTTGAAATGACTAAATTGGGTATGAACTGCTTTTAGGCTACACAATCCAGAGTGTAGAGACTCAATCCAAACATCTTTCCTTTTCTGTGGTGCTAAAATTTCCTATGACTTGACAAGTTAAAAATAACATGATTCATTGAGTTTAGTAGCATAACTGCTAAACTCAGAAACGTTTCCATTCAACAAATTCAAATGTAGAAAGCAAAGTACTGACACAGAGGGAAAAGGCTTTGGAATGAAGAATGTTACCATAGAAAGCAGTGCCATCCATGGATGTGAATTTAACACAGCTGACTTCCTAAAGGATTATCAACCCAAGGAGTGTCCAAAGTTTAAAAAATGACCTTTTAATGTATGTTGTTATGTTCTGCTTACCTCGTCATTTTGACCACTCTATGTCCTTTTTCAAAGTGTTTTTACACTTTGATTTGGAATGGTTCTAATGATTCTTTGTACTTGAATGTGGTTGGTCAGGCCATGGATGAGTGCCTTGCACACAGCAGACATTCAATAAATATTAAATGACTGAAGGAATGTGCATCTATGTGATATTAGTAAAGGGTACGGGGCTTCCCTGATAGCTCAGTTGGTAAAGAATCTGCCAGCAATGCAGGAGACCCTGATTCGATTCCTGGGTTGGGAAGATCCCCTGGAGAAGGGATAGGCTACCCACTCCAGTATTATTGGGCTTCTCGTGTGGCTCAGCTGGTAAAGAGTCCACCTGCAAGGTGGGAGACCTGGGTTTGATCCTTGGGTTGGGAAGAAACCCTGGAGAAGGGAAAGGCTACCCATTCCAGTACTCTGGCCTGGAGAGTTCCATGGACTGTATAGTCTATGGGGTCGCAAGGAGTCAGACACGACTGAGTGACTTTCACTTGGTTACAAAAGAAAGCTCAAAGGGATTCTTTTATGCTGCTGTTTGAAACCAGGATGAACAACTCTTAAAGCTAGTGTCTCAGCATGTGTTTTATATGTAGTTCCCTTTCTGGAGACTTAATTTGACCTTAAATTTACAAAACCAAAC EMBV3_25493 CAGGCAATGGCAGGAAGGCTGCCCCTCAGCAAGCTGTCTTCATGTGCTACACTTTCATTA Gene GeneID:534607|CIDEC:NM_001076031:158_cdna Constitutive 1 NULL GeneID:534607 22 GENE CIDEC MGC139113 cell death-inducing DFFA-like effector c EMBV3_36048 TCTGAGAGGCACAGCTGCCCTGACCCAGGATTGCTCTCTGACTCCTAAGAGTTACCAATT Gene BVT0102_183320 + 0 NULL GK000019.2:38430121-38496983 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096721 TCONS_00096722 TCONS_00096719 TCONS_00096720 1 XLOC_058037 Coding TCONS_00096722 XLOC_058037 NonCoding Coding - 19:38484033-38487425 - TSS71802 951 2 TCONS_00096722_1 97 2 0.720141551164848 0.0007947222400183 0.000676166224086015 1.17773545521565e-106 2.0725549311942e-05 1.30054143696891e-05 1.8843693251938e-48 0 0 5.85161551521529e-49 0 0 0 8.95467226537932e-69 0 0 0 0 0 7.11831747162665e-05 9.44261508335443e-05 1.10684024094524e-11 0 0 0 1.93970167094185e-50 0.000114537417226637 0 0 0 0 0 noncoding 0 0 0 0 -0.0625145812806137 0.681684538094792 -0.0174130735714381 0.758547957064249 TGCGGCGTCCCGGGGAAGAGGGGGTCACCTTGTAATTGCGACCTCCCTTCGCTCCGAAAATGCTATTTCCGGACGCTTCTGCCGGGTTTGAAAGCCTCATTTCTAATCCTTCAGCCAGGCTCCCGCCTCCAGAGGGCCGAGGCTCGGTGCTAGACCCTCCCAGGATTCCAGATCCCACCCCAGCGGCGCCAACCTGCGGATGGGCGGTCGGCGATGCGGCTGGAGGCGCGCGGAATCCCGAGGTGCCCCTGACCCTCCTCCGGACGCCAACTCTGCGGCTCCGGCTCGGCCGCCTCCCGGCCTGGCGACCTTCCTGCCCTCCTGCCCACAACCAGGCCAGCGCCCGGCACTGAGAGCTCCACCCCGCGCGCAGCCGGGAGGCGAAAGTGCTGATCCCCAGCCGAGCACCGCGGGATGCGCGCCGTCGGGGGCCGCCGCGCTGGCCCAGCGCCAGGGAGCCTAGCTAGGACTTGGTGTGTTCCGCACAATCCCAAATACGTCCGGAGTCGGGATCTAGGTGCGTAACGGAGGCAAATCCTTCCGCCACGACTTCTCCAGCCACCCCAGTCCCCAGGAGACGTGGTCCCACTGCAGTGAGCACTCTCTCCCTGGAGCCGCGGCAACTTGTGGAGCCTCATTCCCCCTGGTTCACATCAGAGCTCAGGATCCCGGCTCACCGGGGCCAAGGAGCTAACGGACTGATGAAGAGGACAGCTTAAGACTCTGAGAGGCACAGCTGCCCTGACCCAGGATTGCTCTCTGACTCCTAAGAGTTACCAATTCCTAGAAGACCTTGAAATACCCACCATGCAGCCCCTTTATGCCTGCTTCTCTCTACATGCCTTTTTCAGAGGCCAGTAATTTTGTATTGGCCCAGTCCACACAGATTGAGATACCTTCTCTGACTTCTGCCCCCTCCCATAAACAACAAGCCCCTGGACAAAAACACAC TCONS_00093650 r 5' 12709 TCONS_00093650 r 5' 9559 EMBV3_16105 GTGGCCAGAAGAGGGGGTGCTGGGTTCAAGTTAGAATGTGGGGTCACTGCTGGAAGAGCA Gene GeneID:510032|TFEB:XM_002697237:415_cdna Constitutive 0 NULL GeneID:510032 23 GENE TFEB NULL transcription factor EB EMBV3_01182 CTCACAGGGCAATGGGAAGATGCCCAGAAACTGCAGCACCGCCTCATCGAGCCAAACACT Gene GeneID:506001|DHDPSL:NM_001075237:78_cdna Constitutive 0 NULL GeneID:506001 26 GENE DHDPSL C10orf65 MGC140473 NPL2 dihydrodipicolinate synthase-like, mitochondrial EMBV3_03991 GGTTACTGAAGTTCACAATGCTAACCCCTAAGGCTTTGAATGCCCCTCAGTCCTCAGACT Gene BVT0102_008973 - 0 NULL GK000016.2:28245551-28258331 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066911 TCONS_00066910 TCONS_00066913 TCONS_00066912 TCONS_00066909 1 XLOC_041312 Coding TCONS_00066912 XLOC_041312 Coding Coding CNIH4 16:28236807-28251627 j TSS50441 6755 2 TCONS_00066912_4 106 0.168467801628423 4 0.544436196774411 0.000116993125345182 2.14935741107003e-12 0.000100328123505456 2.11922311723309e-16 0.000189008038878536 1.65710334816402e-05 4.25290910797409e-05 2.7718429557554e-05 3.69521592981042e-05 1.38079705549371e-05 5.00262501243631e-05 0.000220434108591588 4.83492395133479e-21 9.38184470251046e-12 1.46582611671455e-11 0.00013728078986421 4.16632706700982e-12 3.05341992915358e-20 0.000218225436429476 7.24195037295515e-05 3.45429591974215e-05 0.000202775120054365 2.1131209728975e-22 3.98433709156509e-05 0.000123274603909988 0.00035591784629467 2.82392246311211e-05 4.30597147136321e-05 3.426440527565e-05 0.000170177782938316 XM_005216808.1 CNIH4 PREDICTED: Bos taurus cornichon homolog 4 (Drosophila) (CNIH4), 0.0 1223 100.00 0.100222057735011 NM_014184.3 CNIH4 Homo sapiens cornichon family AMPA receptor auxiliary protein 4 (CNIH4), transcript variant 1, mRNA. 0.0 1216 79.70 0.196299037749815 TCONS_00066912_1 sp|Q3T126|CNIH4_BOVIN CNIH4_BOVIN Protein cornichon homolog 4; 3e-52 163 100.00 0.987179487179487 1 noncoding 0 0 0 0 -3.48635800840395 0.0273016302418762 0.0477004605927498 0.387025915250379 TTTTCTACATGGCTCAAACATAAAATAACCTATCAGTTGTTTTTTTCCAGGTGACATTTCTCCTCAAGACCTCCATCCTCTTGCTATAGTCTGGAGCAGTTGCTCTTAGACCTTTTCACAGCTTCCATCTTGGGACTCCTGGTTGGATCTCCCGATTCTTGGAAATCATGTCTTCTTTTCTCTTGGCTTACTACCTCATTTTGCTGGAGTAGCTTCTTGAGATTCGTGGGTGATTCCAGAATTGGTTGGCCATACTCTTGTCACTGTACTAATGCTCATCTCATTGCACTGGTTCATCTTCCTTCTCAACTTGCCTGTTGCTGCCTGGAATATATATCGGTACATTATGGTGCCAAGTGGTAACATGGGAGTATTTGATCCAACAGAAATACACAACCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCATGATCAAACTTGGCTTCCACCTGCTCTGTTTCTTCATGTATCTCTACAGTATGATTTTAGCTTTGATAAATGACTGAAGCTGGAGCAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTACTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATTTTTTCCTCTTTGAACAAAAAATATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTTTGTAGCTTTCTGGTTCTCAACTTTAGCCTGAACCCCCAACATGTGAAGGTGTGTTTCATCATCTGTATATAGAAGACAGTTATTTGTATGCAGGAAGAGGACTCATTCCAGCCTTGCATGCCAAAGAGTAAAGGACATGCTGTAAACGGAAAGTGTAATAGATAAGCAAGGTGGCTCTTCAGGTCAAGAGTGCAAAACCATATTGTTGTTAGTCTGGGCAAAGGAGGAAAGAAACTAAACTACCCTTTTGCCTATATTGTGGCAGCTTCCTATATTTCACATGGTTTACAGATTTATGGGACTGTAAGCCAAATATCTTTTCATAAGAATGTTAAAAATGACATTTCAAAAAAATATATATTTCTTTGCTGAATTTGTGAAGCCTTATAAGCCATTACAGGTACAATGTAATTCCTGCCTATAGAAAGGAAAATAAGCCAAAACAAATTTTATCAAGAGCTTTCATTTAAAAGCCACTGCCTCCACAATCACCCTCGAACACATACACTCTCACTGGCTCTTGCTGGATCTTGGTTTTGTATTCTAATTGATCTAATTATATTTGATCTCTCTGATATGTCTTTTAATGGGTTTGGAGAGGTGATTTGGTAGAAGATGCTCATCAGGTTAGATGCAGGAGTAGCTGGTCATTCAATGTCAGTGAAATTGATCCTGTCGCCAGTCTGCTTGGTTCCTGACTGATACTTCTGTCCTGCTGCACTGACCGCTTTGTCCATGTCATGACATAGCAATATCTAACCAAACTCGGTTCCTTGGAGTATTTGTCAATTCTTGCAGTTGTTGAGAGAAGTTAACCTCTTAGGTTCTGTTTGCCAGGTGAAGTGAACCTCGCATTTTATTCTCAGTTCTTTGTGTTTTAATGTCTCTTAGGTGCTGGTATTTAGGCGAAACATAGCTGTGTTTTACAACAGAGTCCAAAGAGATTCTTCAATCTGTGGAGGCAGAATTGGTTAGCCAGATAAGTTGTATGGTCACCAAATATCAAATGTTGCATGTCTTTCCAGCCTTGGACTAGGCTTGGCAGAAGCCAGAGAGCCACTAAGCAAAACTCTCTTTATGGACAGACCCACATTTTGAGGATGGTGGTATGCCCTGTCCACACGTGAAAGGAAGGGTGAATGGTAGCAAAGTAAACTTGGTTCTTTTGGTCTGCAAGTCTCAGAATTTGCTCCTTGGGGTTATCTTGTATTTCTTCCAGGCAAAGAGCCAAGGAGCTGTAACACAGAAGTTAGTTTGTTTGCATCCCTCTTACCTTTTCTTTCTTAGGCACCTTCCTGTTTAAAAAAAACTGTCACTTAACTGGCTGTATCCCTAACTTCCAGTGCCTCTAAATGTTCTGCTCAAGCTTTTAAAGCAGTGAAGGTGTTGGAAAATTTTAGAACTGAGAGATAAATAAGCTACTTCAGGAAGCTCAAAGGTAGTGGAGGACTGTTGAACAAAATGTTTTACCTTCTCATTCAAATATTCTTTTTAAAAAAATGCCAATATTCACAATGTTGTTAGTTTCATATCTATAGCAGTGATTCCATTTTTATTTTATTCCATTATAGTTTATTACAAGGTATTGAATATATCAAGTATTCCCAGTAACCAAAATAGAAACTCCATGTAGTTGAGAGCATCTGGCTGTCAGTTTGCATGTCGTCGGGCACAGAGCAGAGGCTGAGCAGATCAGAAAGTTGCCTTGTTTACAGCAAGACAGGAGCTCTTTACTTCTGAAACATTAACTGTGGTTAAAAGCAAAACCACCTTTCTTCTATTGCTTGTCTGTATCAAAGCCAGGAAAGGGGGTGACTCTAGTTCTTTGTTTTAGGGGCTCTTCTACAAATGATGAAAAGAGGAAAATAGCAGTGACTTTAAAGAGCTGTGGTTAAGATGCTAAAGATTACTTTTCTATGCTTTTATGTGACTGGAGAGTTGCAGAGGGCTTTAGAAATCCTTTGGTCTAAGTTCATCTTAGCGGTAGAGAGCAGAGCCCCGGGGACTGCATCTGGAATCCTGATGGTTAGGTTAGTGTTCTCTCTCTCCTGTCATTCCTCTTCCCTGTCTGTGAAGACAGTACCCAGCGCCCAGCCAGTGAAGGCTGCAATGGCGTGCTCCTGGGTGCAAAATACTTTTATCTGTGTGTTCTATCCTTTTCCTTCCCTCCCTTCAGTGGTAGCAGGTGCCCTTACTGATCATGGGACTCTCAGCTAAGAGAGCTGAAGAAGAAAGATCTAAGGTACAGCTTGGTTTTTCAAAGCCTGACAGCCACCTTTTCATGCCACACAGATGACAAAGGAGTAATACTGTCCAAATCTGCTTCCCCACACCTGAACTTTGAGAGATAAGAAAGCTCCCCAATGGAACTTTTTCTCCTGTGCTCTCACCACTTTCTATCTGGTATTATGGTCATTTGTATGCAATTCATCTCTCCTACTAGACTGTACACTCCTGGAGGGCAGAGTATATTCTTATTCATGTTTGTATCTTCTTCCTGTTGCTCCTGGCACCTAATACAGTGCCTTGCACACAGAAACAATAAATGATTATTGAATGAATGAATAAATCTGACATAGAAGAAGGGGGATGGACTTAGGAAGTAGACAGTTCTGGGTTCAGATTTTCAAGCCCTGCATCTTCCAGTTAAAGTTATTAACCTTCTCAAGCCTCAAGTTTCCTCATGTGCAAATTAAAGATGATACTAATAGGAAAAAAAAAAAGTAAATCTGATTGTGTTGTTCTATTGCTCTTTCAGCATGAAGTCTTAACTGATGTCCTTTACGTCAGAGAAGTCAGAAGTAATGGAGCAACATAATCAAAGTCTACCGTCTGTTTTCGAGGCAGTCACATTATGGAATGTTCTAAGACATGCTAGGTTAGGAAAGGAAACAGCTGTATTTGGTGCACTTGAGACTTGTGAACTTTACTCACAAGTAATATTTTGTCAGTAATTGTGGTAAGAGTTATTATGTACTAGGTATAATTATTCTCAAATGTAAGTAAAATTGTTCTAATATATGGAACAGGCAGCAAGACAGAGGAAATCTGAAATTCTATGCTTATTATCTAGATTGGTGCCACCTGAATGTATGTACTTTAGGCCAGATTTACCATTTTGCAATGTAGTGTAACAAAGCTTGAGATATTCTTGGTGTAGTGACACTACAGTGAATAAGGCCATTCAGAGAATGGGCTGTTATGCCTTTGTGAGAACTTGTCAGTGAAGCCTTTTGGTTTTAAGCCATATTTACCATGAAAATTCTAAGATAGTAGCCAAACTGTTTTGCTCTAAATATAGTCTGAGGACTGAGGGGCATTCAAAGCCTTAGGGGTTAGCATTGTGAACTTCAGTAACCACAGTAATAATTACCTTTAGGACATAGATGTTAAAGGGATTGATCACTAAGTTGGTACTGAGCTCAAATTCTCTTCAGAATAAATTCTTTGATAAAAGCTGTTTTTGCTTTCAATTGCTTCCCTCTGAAGCTGGGTGAGGAAGAGTGAGTGGGTGGGCAGTCCAGATCAGCTAGCTCAGAGTTCAGAGGTTTGACTGTGGCTTCCCTGCTGTGTATTTGGTTTGCTGCTTCCATTTATGGAGCAATCTTGGTTTCATCTGTATTAGTTCCCATTCAACATTAGTGCCTAGTCAAAAAGTGAGTCAGCTTAACAAAAACTGAATTTGCTGTTCTCCAGCAGAGCACCTTGTGTATAGAGGTTGAGAGGACTAGGAAGGTGTCAAGCTACACCCTACTACATCATCCTCTCCAGCCATCTCTTGTGTTCTTGGTTCACTTTTAAACACGCTGTGTTTATCAGTCCCCACTTTGTTACTGACCCAGGGGACATAGTTAATCTTAAATATGATATTTTAAGTACCATATACTCTTAGGTAAGAGACTGGCACTTGAACAAGGAAGGAGCTTGCATCCTTCATGTGTTTTCACAGCTCAGTTCATTCAAATGGATAACTCTGAAGGAGAGGATATAACAGGAAATCAAGTTCTAGAGTCTGATCTTATCATTTGATCTGATCAGCAGCCTGTTTCACAGACTGGATGCAAACCAGGTGAGGGTTGAACTCAACAGCCCAATTAAAAGCAAGTTTGGCTGCCACTGCATCTAATCTCTAAGAGACCTGCAGGGCAAGGCTAGTCTTCTGGTGTAAGTCTATATAAAATACTAACTTTTGGGAAGACAGTAATAGGACTAGTCCATGTTAATTGGTAATTTTCTATTTTACCAGCTACAGTAATCAAACATAAGGGCATTCTTGTTTTATCCACAACCTACTACCTTCCCTCCCTCACCTATTTTGAAGCCAGTACTACACATTACATATGTAATATTTCTATAAGATAAGGTTCTTAAAACACACACACAGTCCCAATATCATACATAAATTGGTAACTACTTAGTACTAAATAGCCAATTGGTGCTCTGATTTGCCCCACTGGCTCAAGTTTTACAATTTGTTCACATCAGGATCCACCAAAGATCTGTACATTCACTTGAGTAGTCTCTTTTAAGACTCTTAATCTACTAAATTCCCTCTTTTTTCCTTTGCAATTTATTGAAGAAATGGTTTCATTTGACATAGCAATCAAGTCATTTGTTGTGTAGAACTTGTAGTATTCTGGCTTTTGCTGACTGCATCCTCTGCCATAAACTCTTAAAAAAAAAAGTTTGTGATTTTACTGTGTACATTCTCACCCATCACAATGCTGTCTGATAAGATACTGTTAGATCCTTTCTAAGTTAGGTAAGGGAACTAACTTAAGTACTTGCCTAAAGCGACATGCAAGTTACAGGATTTGTATTCAAGTCTGATGATTCCAAAACCACTACTTCTAACCACTACTTTATAAAGTAATTGAGATATTCATATTTACTGTGGAGGTTTTCTTCTATAAAACTTCACGAGCCTGTTTTATTATATGGAGAAATATCTAGAATTTCAAAGGTGTCATATTCTTCTATGAACTACACAGTTAATTAGAATCAGTCAAGTGTGCCCTTAAATGTTGCCTATCTTTGACAAGTTTTAAGTCAATTTTTAATCCAGGGTTAAGTGGCCATCTACAGACCAAGTAAGGTTTGTATGACATAGTGGCTAAAAGCATAAGCTCAGGGGCACCTGGCTTTGAATCCCAGTTCCTTCATACCAGTTATTTAAACCTACTTCCCTCATTTGTAAAATGGAAATTAGTATTTGCCCCATGAGGCTACCTTGAGAATAAGAATGAAATGAGAATGAAATGAGTGGCTCATCCACAGTGACTGGCCTAAAGCAAGCACCAAATACATTAGCCCAAAGGAATACCTGTTCTGTAATCGTGTTACTTAACCAACTAGTGTATAGCTTTGTGGTTGAGCCATTGTCTGACTCTTTGCAACCCCATGGACTCTATCTATAGTCTATGGAATTCTCCAGGCAATTCTACTGGAATGGGTAGCTGTTCCCTTCTGCAACCCAGGAGCTGAGGGGGTCTCCTGCATTGCAGGTGGATGAGCTACCAGGGAAGCTTACGTGCTGTGGTTGGCCCCTGTCAATACCATTCTTGCTCCTACTTTTAATTCTTGGTCTCACTGCTAAAGTAATGTAGCACAGTCCCAGTTTTCAAAAACCACCAGTAAGTGCCAGCTGACAAGTTACCTCGTGTGTTACCAAATCTGACTCATGATCTGAAGATGGCTTAGAAATCTAAAAGTTAAAAACGCCTTCAGGTGAGTCCCACGTGCACCTGGATTTAGGAGTTAAAACCACAGGCTTTGGAATCAAAATGAGTTTGCAAATCCCAATGCTACCGCCTATTAACTGTATTAGTTTCTTAAGCCTGAGTTTATCACTGAAAAAAAAGTGAGCAATACTTGCTTACAGAGATAGAACTTTAAATAATGTATATAAAGTACCTGGTATCCAATAAGCACTCCCAATTATATACACAAACATTAGGAGAAACTATACAAAGGAAAAGGAAATTAAAACCAAACCAGTTGATTTATCAATCAGTTCTTTCTGGACAAGGAAACAAAATCTTACTGAAAAGGTCTTCATGTTTAAACAT EMBV3_15493 TTGGTGGCCATGACCATTGTGGGGGAAGCAGAGAAAACCCGTGGCAGCTTCCTGGCTCTG Gene GeneID:767895|WDR60:XM_002686990:835_cdna Constitutive 0 NULL GeneID:767895 4 GENE WDR60 NULL WD repeat domain 60 EMBV3_33054 GGGGAGGTATCCACAGAGGAGCGACAGCTTAACGCCAAAAAGAAAAGAAAAATATATATA Gene GeneID:511283|ARID3A:XM_002689144:134_cdna Constitutive 2 NULL GeneID:511283 7 GENE ARID3A NULL AT rich interactive domain 3A (BRIGHT-like) EMBV3_39629 GTGAAGTGTTACATAAATGAAGCGGTCACACGATGGCTTTCTTCCCTCCTCAGGCTTCCG Gene BVT0102_400448 + 0 NULL GK000010.2:5755563-6181417 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01940 CTAAAGCCTTTAGTGCATTCTCCTCATGCTATTGTGAGGATGAAGTTTTTGCTGCTGCAG Variant GeneID:767999|WDR26:NM_001077059:122_cdna 133^180 1 EMBV3_12695 GeneID:767999 16 GENE WDR26 MGC134185 WD repeat domain 26 EMBV3_24430 CTGCTTGCTTTTCCAACATTACTCTCAGCTATCTAAACGCATCCTTCCTCCCAACCCATG Gene BVV0102_027014 + 0 NULL GK000015.2:38977400-38991043 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061149 TCONS_00061148 1 XLOC_036939 Coding TCONS_00061149 XLOC_036939 Coding Coding SPON1 15:38985840-39309268 j TSS45601 10772 1 TCONS_00061149_5 783 0.0576494615670256 15 0.96674056278542 0.000145662245254021 2.63665752202499e-05 2.04456754683025e-05 0.000101262221516836 2.3009586443397e-05 5.12413352575101e-10 6.81317375884627e-09 1.43870945447575e-05 6.47809495149814e-17 1.48317172667749e-08 3.70298916812106e-11 2.83861457830522e-05 1.50171199315774e-05 2.8180937579037e-08 6.1716559157754e-09 0.00182202808300801 0.000669381553295947 0.000776474408078776 4.89746321627935e-05 3.91060756533701e-16 5.46182320239326e-06 0.000139071533159642 0.000572101173983666 0.000463722811733063 9.10270156240473e-05 2.81929511117383e-05 3.29584019951887e-05 4.86372190622945e-08 2.05341529011899e-05 2.09992320295277e-08 NM_174743.2 SPON1 Bos taurus spondin 1, extracellular matrix protein (SPON1), mRNA. 0.0 4284 99.83 0.221685852209432 NM_006108.3 SPON1 Homo sapiens spondin 1, extracellular matrix protein (SPON1), mRNA. 0.0 3438 92.03 0.221221685852209 TCONS_00061149_5 sp|Q9GLX9|SPON1_BOVIN SPON1_BOVIN Spondin-1; 0.0 1525 98.31 0.983397190293742 3 coding 0 0 0 0 0.196506285596711 0.323083055168011 -0.0177032579115722 0.790673495484619 CCAGCACCGGCTCGGAGCTCCGCTCCCCGCCTGGGCTCTGCCAGGTCTCGTTTCCGCGGGGACCCCTTCGGGCAGGAGTCGTGCGGCGAGAGCCAGCGGCCAGGGCACAAAGTTGGGGGCCCGCGAGGATGAGGCTGTCCCCGGTGCTCCTGAGGCTGAGCCGGGGTCCAGCGCTGCTGGCCCTGGCGCTGCCCCTGGCGGTGGCGCTGGCCTTCTCCGACGAGACCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGCATCCTGCGCGTCCAGGGCACGCGGCGTGAGGGCTACACCGAGTTCAGCCTCCGCGTGGAGGGCGACCCCGACTTCTATAAGCCGGGAACCAGCTACCGCGTGACGCTTTCAGCTGCCCCTCCCTCCTATTTCAGAGGATTCACCTTAATCGCCCTCAAAGAAAACAGAGAGGGTGATAAAGAGGAAGACCATGCTGGGACCTTCCAGATCATAGATGAAGAAGAAACACAGTTTATGAGTAATTGCCCCGTTGCGGTCACAGAAAGCACCCCACGGAGGCGGACGCGGATCCAGGTGTTCTGGATAGCGCCACCTGCAGGAACTGGCTGCGTAATTCTAAAGGCTAGCATCGTACAGAAACGCATCATTTATTTTCAAGATGAAGGCTCTCTGACCAAGAAACTTTGTGAACAAGATTCCACATTTGATGGGGTGACTGACAAACCAATCCTAGACTGCTGCGCCTGTGGGACTGCTAAGTACAGGCTCACATTTTATGGGAACTGGTCTGAGAAGACACACCCAAAGGATTACCCTCGTCGGGCCAATCACTGGTCTGCAATCATCGGCGGATCCCACTCCAAGAATTACGTGCTGTGGGAGTATGGAGGATATGCAAGTGAAGGCGTCAAACAGGTTGCAGAATTGGGCTCTCCAGTGAAAATGGAGGAGGAAATTCGACAACAGAGCGACGAGGTCCTCACCGTCATCAAAGCCAAAGCTCAGTGGCCAGCCTGGCAGCCTCTCAATGTGAGAGCAGCACCCTCGGCTGAATTTTCAGTGGACAGGACGCGCCACTTGATGTCCTTCCTGACCATGATGGGCCCCAGCCCCGACTGGAACGTGGGCCTGTCCGCAGAGGATCTGTGCACCAAAGAGTGCGGCTGGGTCCAGAAGGTGGTGCAGGACCTGATTCCCTGGGACGCGGGCACCGACAGCGGGGTGACCTATGAGTCACCCAACAAGCCCACAATTCCCCAGGAGAAAATCCGACCCCTGACCAGTCTGGACCATCCTCAGAGTCCTTTTTATGATCCAGAGGGTGGATCCATCACTCAAGTAGCCAGAGTTGTCATCGAGAGAATCGCCCGGAAGGGGGAACAGTGCAATATTGTGCCCGACAATGTCGACGATATTGTAGCAGACCTGGCTCCAGAAGAGAAAGATGAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCGTGGTCCGCCTGCAGCTCCTCCACCTGCGACAAAGGCAAGAGGATGCGGCAGCGCATGCTGAAGGCACAGCTGGACCTCAGCGTCCCCTGCCCCGACACCCAGGACTTCCAGCCCTGCATGGGCCCCGGCTGCAGCGACGAAGACGGCTCCACGTGCACCATGTCCGAGTGGATCACCTGGTCGCCCTGCAGCATCTCCTGCGGCACCGGCACGCGGTCCCGGGAGAGGTACGTGAAGCAGTTCCCAGAGGACGGCTCCGTGTGCACGCTGCCCACCGAGGAGACAGAGAAGTGCACGGTCAACGAAGAGTGCTCTCCCAGCAGCTGCCTGACGACCGAGTGGGGCGAGTGGGACGAGTGCAGCGCCACCTGCGGGATGGGCATGAAGAAGCGGCACCGCATGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCTGAAACATCTCAGGCAGAGAAGTGCATGATGCCCGAGTGCCACACCATCCCATGCTTGCTATCCCTGTGGTCTGAGTGGAGTGACTGCAGCGTGACCTGTGGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAGTCTCTAGCCGAACTCGGGGACTGTAATGAGGAGCTGGAGCAGGTGGAGAAGTGCATGCTGCCTGAATGCCCCATTGACTGTGAGCTCACGGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGACACATGATTCGAACCCGCATGATCCAAATGGAGCCTCAGTTTGGAGGCACACCCTGCCCAGAGACTGTACAGCGGAAAAAGTGCCGCATCCGGAAATGCCTCCGAAATCCATCCATCCAGAACCTGCGCTGGAGGGAGGCCCGAGAGAGCCGGAGGAGTGAACAGCTGAGGGAGGAGTCGGACGGGGACCAGTTTCCAGGTACTGCCCCCAAGTATGGGCTGGCATTCAGGGAGATGTCAAAGCAGTATGGGTCTTGTAGGAGTCTGCTAGTAAAAGAAGGGTGTTTCTAGGGAGCAGGCATTGTTACTGCAAAGGCATGGAGATACCCAAGAACAAGATATGTTCAAATGGTAAGTGGGCTCTAGAAGAACACACAGTATTCTGTGTGGGGAGGCAGGAAACCAGGCTGCAGACAGAGGACAGGGACCAGAACAGGAAAGGTCTACTGGCTGCTGAGGACTTGATCCTGCAGGTGAAGGTTTCAAGTAACAGACTGACTTTAACAGGCCTGTGTTGAGTGGTCTGGAGGTGGCAAAAACGGAAGCACGAAGACTGGTTTAAATTTTCTCTGTAGACAAGGAGAAAGCTTATGTGTCCCCCTCCTTCAGTATAACTTAAGGAGTTCCAAAACTAAAAAAAAAAATCCCACTTAGGGCTTCACTGCTGAATAAGCTGGTCCCAGCCAAGAGCGCAATATCAGCAAAACAATGAAACAATAGCTGGGAATAGCTTTTTGTCTAATATCATTTCCATAGTCTAATATAAATATAAAATCAATAGCAAGTAATAAGTCATTAGCAAAACAAAAAAGTTGAGAAATGTGCATTAAAATGACATATGACATAACATCTATTTAGAATGCATTCCAGTATCAAATGACAAACTTCAACAATGCAAAGACCGCAATCATCTTCACACCAACCTAATATACACAGTGCTTTTTTTTTTTTTTTAAATTAAGATCTAACCTAATCTTGGGGGTCAGGGAAGTTTTCTTTGAGAAAGGCAAGTCTATTTACATGGGAAAATAATCAATTATACCTGAGTTTACTTGATACTGGGGAAGCTAAGTATTTGGGACAGCAAAGCACTAGAGGAAGTGGTTACTTGCTCCTTGGCTGGTTGCTGCATTAATGAGCCACTACAAAACAAATGAAATTTACAGGATTCTGTAGGGTAGTTACTTGGATTGACTTAGCTGGATGACTCCTGCGGGGTTTAGCTTAGGCTTATTTGAGTGGCTGCTGTCAGGTGGTGGCTCAGGTAGGGCTGGCAAGTCTAGAATGGTCTCGCCTGTGTTTCTGGGGCCTCTCTCCACGTGGTCTCCCCAGCAGATAGTCACACTTGCTTACACAGTGGTGGAAAAGGTTCCCAAGGGCTTTTTTTCAAGCCATGCTTGCTCTTGTCCCATTGGCCAAAAGCAAGTCATACAGCCAAACCCAGATTCTAGGGGTGGAGGAGGAGACTCTGCTCCTTGATGGGGAAGAGCTGCAAAGTATTAATGGACCATTTTAATAGTCAATCAGCTATGAGCTAACATATGTGATAAGAACTCTAATAACTTAATGAGAACTCAACAAAGTATTACATACAGAGCAGAGAAGTCCAGACAACTACCTAGGTTTGACAGTTGTTTACTAGAGTTCAGTCTCCTGTTCTTCCCGCCATGTCTGTTGGCCTAATCAGGCCTTCTCACGCTTTCAGGCTGCAGGATGCGCCCTTGGACAGCCTGGTCAGAATGCACCAAACTGTGCGGAGGAGGGATCCAGGAACGCTACATGACTGTGAAGAAGAGGTTCAAAAGCTCCCAGTTTACCAGCTGCAAAGACAAGAAGGAGATCAGAGCGTGCAACGTCCATCCGTGTTAACCAGGGTACACGTGTCCCAGGGCTGCACTCTAGACCCCCAGAGGCAATGGCTGGATCGTTTGTTTGCTTGTTTAAGGCAGTTTCAATTGTGTACACTAGTTTTCATTTCTGCAGGGGGGTCCGCCCAGTAGTCCTGTGGATGCTACGGCCACCCTTCTGTACACTTCTTGGTGGGCACAGACTGGGGGTGGGGGCATGGGGCTCCCTCATCCTTAGCCGGCCCTCCTCCAGCACAAGTGAGTAGTGCCAGTCACCTGTGCTGAACAGAACGTGTCCCTCTCAAGCATCCACCTGGGCGGCAGGACAGAGACCCTGGCTTCCCCAACATGGAGAGGCAGCTGTGCCCGCAGCTGACCCTGTGCATCGGTGCCAGGGCGCAGCAGCAGGGAGACTTTCCTGATTGGGTGGGAATGAGAGCAGAGTCCCCTCATTCTTGCCTGTGGCCTGCTTGCTCTTGCAGCAAACTACTGTTTGCTTGTCTCTTCTCATTTAGTGGAACTTTAGGGTCCCTTGTTGAGTCTCCTCAGTCATCAACAGTTCTTGGGGAAACAGCTGGCAAACATGAAGAGAAGCACTGATGTTGGGTGGCTTTTCTTCTTTCACTGAGAAATTCTGAATCCAGTATCTCAACCCGATACTCCAAAGGAAAAAAATGATGGCTGCTTTTTAAAAAAAATATAACCAGTTCTTACACCTGAGGTAAAACATACTGAGTCTAGAAATTATTATTCCCTTCTTTTGGGTTTTTTTGGATATAATTCTCTTAGGAAGCCAGCCTTAGGAACCTTGTGATCCTAGATCCTTACTAGAACCACAGCAGCAAAATTGGCCTCTAGAGCAGTCCCAGGCTTGAGTTTTTTTAAACCTTCCAACACAGACTTTTAAATCAGCAAACCAGTTTCTAACAAGAAAACCTTTTTTTCAGTTATGCAAACATTCTGCCGAGTTTGTCTGCAGTCCACCAAGCCATTCCTTCAACAAAAATACTATCTTAGAACTTGAAAGGGTTTTTACAGTCATAAAATTTTATATGTAGAGAGAAAAAGTGTTTCAGAGACCAAGACAAATCCAGGGAGAAAGGAATGTCACAGAATCAAGTTAGCAGAAAAATCTGGTGGGAAGTCAAACGTACATACATCAGCCCTCCACACCAAGGGTCTGGTCCTCTGACACCACCACAGGGAGGGTCATGGTTTTCCGTTCCCTTCCACACACAAGCACACCAAATTCAGGGAGACTGACTACCAAGGATTAGTGTAAAAGGACGTTTTACCAACTTGAGTCCATCAGCAGTTTCTACTCACTCATTTACTGTTAAAATCACTGTTCTGCTCTTGTTGCAGGCCTTCTTTATCGTGCTTAATCCAAATATGTACCATGGATGAGATGCATACAATGCTTTGAATACACTACTTTAAGAATTTGCATTGAATACTTCAGGATATTCCAAACACAACATTATATATATATATATATATGCTACAGCCTTGAATCTGTACTGTTTTAACTACGAGAGAGACTATTCAATAAAAAACTCATTGGGTCTGTCTTTTGTGTTTTAAACTAATTCAGTGTTCAGAAGGTTGGGTCTTTTTTTTTTTTACAATTGTTATCCATTTCAGTCATACTCAGTAAGAGATATGCCTTTTGCACCCTCATTCTGGAGGGACCACTACTCCATTGCTGAGCTTTCTGGGGGTCTGAATTGTTTCCAACATTATTTTTTTAATCCTTCAAGTGAACTGCTTTCTCCTCCCTTGTACAAAGCAGTACAAAATATAAATAAATAAGAGGTTTAATTTCTATTTGCACAAAAGAAAAAGCCCTGATATAGAATCTGCTTGCTTTTCCAACATTACTCTCAGCTATCTAAACGCATCCTTCCTCCCAACCCATGAAAATCAAAGTTCCACAGAGTGGCAATTTCTAAGTAACTAAGGACAAGCAACCCTAGTATCTCATGTTCTTGTTTGGTCCTGTTTGGGTAAATTTTAATCCAAATTTTGGAGACTTAAAACCAGGCAACTGGTTAATGAATAAGAATGGGTAACATGTTTCTTGTTACATAAGTGTTAACTCTTTTTTGTTTGCACAAGGGGGAATTTATACAAAACGTCAAATCTCTTTCTTACCAAAGTCTTGTGTTAGGTGGTTTACAGTTTTTCTGGTTAACCAATCTTTTGGAAATAAAGACTTTTTACTACAAAATAAAATTTGTTTGGACTTCCACTTGAGATAGTAAACATATCATAAGACACCCAGTAAAAACTGCCATACAAAGAACAACTATAATTGTGTGTATTTTTATCAAGGCCAAACCACTCAGACTTCAATTTACATCCACATTTTAAAATGAAAATAAGATCAGAGATATGTTCCCCAATCAGACATGGGGTCACTCACCTGTCACCTTGCTGATGCATTATTTGAAGATACTCTGTTGTAACAAATAAAAATAAATCCTGGGCTTCTTCAGACCCAGAACTGAAAAAAAATTAAATGATGTTGTGCTGTTTTTAATTGGGACTTTGTATATTAAACATGTTTTAGACATAGTCAAGGTCTCTGTACTTATTCCAGGAAGTAAGGATATACTATACATTCTCACATGACCACAATTCTCCAGTCCAGGTCAAGTCCACAGCTAAAATGTCAAGACACAAAAATCTGCAATGTCAAATTACTTCTGTGACCTAACAAACAGCCCACATGTTTCAGTTTAAAGGATTAAAAATTAAACTGTACTAGGACTGTGCAGTCGGCCCCCTTTCCCCGCAGAGTTAAATATTTATGTCCTTAAGAAAGGGACAGTACAGTCCAAATACGATTATAAACATAAATGTGCGATCTCCAATTACAACACAGCATCAAGGAAGGCAGACATTCTACTCTTTGGTGCTATTAATTTTCATAACTGAATTATTCAGTTTTTCATCTTACTTAAAATAGGGAGACTGAATGAAAATAAAATAGTCCTTTCTGAAAAAGAGATGCTGTAACAAACTATAAATAGCAGCTGAATGCTAACAAGCATGAAGATATTTTTTCAATTTAAATCCTTTGAAATCTGTGAGCAAAAGATGTGTACTAAAATGTCAAATTTAAATAATGGCATCCTTGCTTTAGACATACTATCAAGTGTGCTCTGTTGGGCAGAGAAAGCAGCCTGGGTTCAAACCACTGTGTTATTTTACCTTGTCTGGCCTCAGGCTTGGTAACAAGCTTTCTTACACCAAAGGATTTCTCTGCCCACCTCCACAATTTGCCAGTTTCCATCCTGAGAGCGAGTCCTGATGGTATCCTGGCAGGAGAGTCACTGAACGCCAGTTTTACCCCACCAGTCCCTCGCTCCCTTGTACACCAAGAAATGCCTGCCTTGTGTTGAAGCTGGCTTGAGCTGTATTTCTATCACTTAGGACTGAAAATGCCCTGGAAAAAAAATACAAATGCAAAACTTTCACCCAGCTATCATCGGAGAAAAATGCAGTCCCAGACTTTTCACTCCATGTAATGTCCTAACAGGAGATAGCATTCATTATCACTTTCTCATATTGCTCTAAATTCTTCATAAATCTCAGAATATATCCTTACCTTCTTCCTGGCTTTACAACTTACTGCTAACAGTTCTCATATTTTAATGGTACTCCTATTTAAGGTAATAATTTTCATAGTTTAAAAGTGTTCTGTGTTTAGACAGTTTACTTTAAATATTAAGAATTTTAAGTATTAGAAGGGACAGGGACCAACATCTTATTCAAGACTACAACACTGAGAGTTTATAAGAGTCTCTTTTGGCTAGTGTAAGCATGTAACTCCTACAGGGTGATCTTAACCTGGAAGTTACCAACCCATGTAAGAACTCAGATGGGCCACTCATGAAAAATCCCTGGATCTCCTGCTCCTCACACACTGCATTAGTGCCACTCCAAGAGAGACTGCAGCCTGAAAACATCCACAAACTGACCATTACCATCCTACAACGAAAGACAAATTAAAAGCATTCAGAAACTTTTAATTTGACATTGCCACAATAGCCCAGAGGATGATTATTTTTCTAACAGTTGTATTCTATTTAGTACACTGTATCCAGGACAGTGGAGATTAAAAAAAAAAAAAAAATTGCTTTTAAACTGGCCCTTCACCTCAGTCTGAGAAGCACTGCCCTAAGCCATCCTCACTCATCAGTCAGAAAGGAATGTCACCCACAAACCAGAAGCTTCTCAATCTCGCAAGGCTTACGTACGCAAATGGGAATATCTACTTCTAAGACATGCACACCTACGTGTCTATGACTGAGTGCCCTGCACTGGCTCATTTTCTTATTCCTCCAACATCCTATCCTATCAAGCAAGACAGCTGCCCCACCACCCTCTGATTCTGCCACAAAATTTCTCCGAATGGTAACCTTAGCTTCCTTCCTCCACTTCCTTTTCCTCCAATCACACTACAACCAGATGACCAAAATGAATCTCTCAAACTCACCAGCAATCTCTAAACACGCAGCGCTGCTCCTCATTCCCCAATCCGTGCACAGCACCCAAAGCTCTTTACTACCCTCAACTTCCCTGACAAGTCTCCTGAGTCTTTCCAATTATGGGCTACTTCTCTTGGCTTTCTTCTGCCTTTTTATTTCCTAAATGTTCGTTTCCCCCAAAAATTTTACCCTGGATGTTCTCTCAAACACACTTTCTGCCTCAATTCACTCCTACCTCACCATAGATCAATTCCAAATCTGCAGCTTTTAGTTCCAGCCTCTTCTTGCACACATCAATCCCTATTCCTCTGTGCCTCCTGGACTAACTCTGTATGTACCTGCCACAGTCACCACATATTCTGTCTTCTAACTAGGAGGCTATCTGTGCCCCTTGTTCATTCATCAAATGGTTTCCAGCCCATGCCAGGCAGCATGCGTAAAGCAGTAAACCCAACAGGTACAGTTCTGCCCTCACAGAGCTTATGATATTAAGTTATACATGGTGGGTACGTATCATGAAGTAAATACAGGGCAGTGTGATACTAGAATGAGGTGGTCCAAGAGGGCTCTCTAAGGCGGCATCTAAGCCAAGAGCAAGAGTGAAACAGCTAATTCCAGCAGTCGAGTGAAGCAAGTGATTTGGAAAACACTCGGCATGTTCTAGGGTGTGAGAAAGCAAGTCAGCTTGAATGTAAGTGAGAAGCAGGAAGGTGACAGATCCTGCAAAAGATTTCCTTGTACACTATGGGAAGGGATTCAAATGCTGCTTCAAGTGCACTGAGAGGATGGCAGATTTTAAGCAGCAGTGTAACATTAAATTTATGGTCTAAAAAAGATCCCTTTGGCTGCATGACAGAAAGGCTGTGTCGGGGCAAGATGGAAATAAACTACTTCACAGGCCATTGCAATAACATGGGTGCGAGACCAGAGAGGCTCGGAGAAAGTGGCAGAACAAACAGAAAAAGAATAGATTCCATGACTCCAATAACTTCTTACCTGACTACCCCTCCTTAAATCCACACTTCATCATCCTTACTATACAAGACTGGATGCAGGCAATCCCTGTTCAGAATGCCCGGTGGTTCCCCATTATATACAAAAGGGCCACTATATTTAAAGCCCTCCACAACCGAAGCCCAATCTACTCCATCATTCTTTCCCAACTGCATTAAAATCCTTTTAGATTAAGGTTCCAATCCCAGAACACACCCTGTGTGCTGCCAACTCTGTGCTTCTGCCCAGGCTTTTCCCCAGCCTTTCCACATCTCACTCTACTCCTCTCTTGCCACCCCAAAGCCTAACAATCTATCAAGCTCCAGCAAAAACATCACTTCTAATTAAGAAGCTAGGCGCCCTCTGATTTTCTAGGAGGAATATAAAACCATCACTTCTGCTGGATTTGACAACTTTTGCACACTCCTCACACTCTGCCTTAAGTCTGCAGTCTTGACATTTGTTTTTGTCACTCTTTATCCTCCCCTACTAGACACTGAGTAATTTGTAGGAAGGAAATCTATCCATTCCCCAGAACACCCAATGAAGTCTTGCACAGAAAATCTATGTTCAAATTAAAGTGCCTTTAGAAGCCACAAGGAGACGGCAGGAGGGACACTTTCATGACATAATCAAATCCCATGCCCACAAGGTGGGTGGCCCACAAATTAGAAATAAAAAATTGTATCACAGAGGTTCTCCCACAAGAGAGAGGCTCTCCGTCCTAAGGGTCTGGCATCAGGAGGAGGAATTCCCAAAGCATTTACCTTTGAAGCCCAGAGGGGCTTGAGTGCAGGAGGTCTGCAGGGCTGGAGGAAACAGAGACTTCACTCTTGCAGGACACATATAAGGTTTCATGTACACTGGGACCCAGCACAAAGCAGTAACTCCACAGGAGCTGGAGATCCACTGGGACTCATGGTGGGGCAGGAAGGCAAGCTCCAGTGGCAGAAGCCCCAGAGAATACTGATAGGCGTGAGCTCTCCTGATGGTCACCATTTTGGCATCAAGACCTGGCCCTACTCAGGTTCATGTCTCAGGCCAGACAACCAGCAGGACAGGAACACAGCCCCACCCATCAGTAGACAGGGTGCCTCAAGCCACACTGAGCTCACAGCCACCTATAAGCACACCCCTTAACGTGGCCCTGTCCACCAGAGGGACAAGACCCAGCTCCAACCACCAGTGGGCAGGCAGCAGTCCTTCTCATCAGGAAGCCTGCACAAGGCCCCGGACCAACCTCACCC EMBV3_41460 TCTATGATGATCTCCATTGCATTGATATCAAAAAGCAGCATTGGACCTTGCTTAAATTTG Variant GeneID:533613|RABEPK:NM_001035399:32_cdna 693^842 2 EMBV3_24870 GeneID:533613 11 GENE RABEPK MGC133858 RAB9P40 Rab9 effector protein with kelch motifs EMBV3_05875 AAGAAGCAGTCTCTGAGCAGTGACATCATTGAGGAGCAGAAGAAGCTTCAGGAGGCCAAC Gene GeneID:508566|NQO2:NM_001034323:211_cdna Constitutive 0 NULL GeneID:508566 23 GENE NQO2 MGC127852 NAD(P)H dehydrogenase, quinone 2 EMBV3_08473 TATGAAAGAAATGGTGAAAATACAACCAAGGTCCAGCCTGATGACTGGAGGGGCCAAGCG Variant GeneID:613567|STX8:NM_001078037:96_cdna 161^366 1 EMBV3_35976 GeneID:613567 19 GENE STX8 NULL syntaxin 8 EMBV3_00351 AACAAGCTGTGGTACTTTGAATTTGGCACCTCGGAGACCTTCGCGGCCACCTGCAAGAAA Gene GeneID:518523|DGKG:XM_002684869:3_cdna Constitutive 0 NULL GeneID:518523 1 GENE DGKG NULL diacylglycerol kinase, gamma 90kDa EMBV3_39504 AGTTAGAACAACTATACAGTAGATACAAAGATGTGACAGCATAGAAAAACTAAAGGCCCA Variant GeneID:539869|DCUN1D1:NM_001102233:52_cdna 342^510 2 EMBV3_29145 GeneID:539869 1 GENE DCUN1D1 MGC165752 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) EMBV3_16440 CATCATGAACCCCCGCTTCTGTGGCTTGTTGGTCCTGGTGTCATTTTCCATCAGCCTTTT Gene GeneID:618690|LOC618690:XM_002688806:223_cdna Constitutive 0 NULL GeneID:618690 7 GENE LOC618690 NULL similar to Olfactory receptor 18 (Olfactory receptor 145-1) (Olfactory receptor TPCR34) EMBV3_19315 TAATTAAGGGGTAGGAATGTGCTGTGGGCTGGCCCCATGGCATCCAGAAGAGGGGGCATA Gene GeneID:404163|ST3GAL4:NM_205806:8_cdna Constitutive 0 NULL GeneID:404163 29 GENE ST3GAL4 SIAT4C ST3GAL-IV ST3 beta-galactoside alpha-2,3-sialyltransferase 4 EMBV3_40680 TTCTGATACAGTTCACGAGTTCTGTTTACCACTGGATTGGCCTCACTGACCACGGTACGG Gene GeneID:511001|CLEC4F:XM_002691231:83_cdna Constitutive 1 NULL GeneID:511001 11 GENE CLEC4F NULL C-type lectin domain family 4, member F EMBV3_35462 TGCCTTTGAAAATGCTTATGAGGAATGTCGATCCGTGCTTAGACCAATTCGAGAAACCGG Gene GeneID:100140931|LOC100140931:XM_002707846:5_cdna Constitutive 0 NULL GeneID:100140931 12 GENE LOC100140931 NULL similar to pol protein EMBV3_43723 GGTTCAAGAAGTTTTGCAGAGGAGACAGGAGCCTTGAAGATGAGAAGCATAGTGGCCAGC Gene BVV0102_194045 + 0 NULL GK000002.2:21061225-21568559 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101815 TCONS_00101814 1 XLOC_061767 Coding TCONS_00101815 XLOC_061767 Coding Coding LOC100847478 2:21071383-21113369 x TSS75998 1523 5 TCONS_00101815_6 64 3 0.963796594021674 0.00100400062353573 4.91163249357344e-08 0.00106630575405364 0.000464393613847593 0.000125949713335929 2.86558607692638e-05 0.000300397603584334 0.00067480186602742 0.000462933377609321 1.42124410297044e-22 4.48769325436337e-27 0 0.00110458771978464 6.89386668303228e-05 7.06558022748969e-05 0 0 0 7.03662797409701e-05 2.15785629762524e-39 0.00013909742625292 0 0 0 0.000374672700143261 0.00046099194225202 0.000428595920616156 0 0 0 XM_005201966.1 LOC534913 PREDICTED: Bos taurus mariner-like transposase (LOC534913), 0.0 942 80.75 0.657912015758372 NM_001243723.1 SETMAR Homo sapiens SET domain and mariner transposase fusion gene (SETMAR), transcript variant 2, mRNA. 0.0 1076 84.10 0.647406434668418 TCONS_00101815_5 sp|Q53H47|SETMR_HUMAN SETMR_HUMAN Histone-lysine N-methyltransferase SETMAR; 3e-23 93.2 77.19 0.96551724137931 0 noncoding 1 1 1 1 -0.127109511394882 0.253304416741333 0.0583145897028501 0.291737231071956 CTTTGAAGAGTCTTAAGACCATGCAGAAAGCAGAGTAGGGGCCCCCTCTCTGGCAGGGTTAGCTTGTAACACAGTTTGAAATATTTTTCAGGGATGGTCACAGCCTTCCCTGTTAGTGTCCACATTTCTTGGGAAGCAGTGGCCCAGACACAGGGCTCCTGCAAGCCTGGGCATAAAACCTCACTTACGGAGGAAGCCTCGTTGGACCAGTGTGGGCCTGAGCTCTTCATCACAGCTAGGGTCCTTCTCTAGCTTGTAGCAACAGAAACTGGCCCAGGGCTTTGCTTTTCTTCTGACCAGGTGGAACCTGAATACGACACCCATTTTTGATTTTGCAAAAGGCAAGTCTTCCAGCTTCTGGGATAGACGCGTCTGACACCAGGGGAAAACTACAGTTGCGTGGTCCCTTACTCCATCTGCCGGCTCTGCATCCTTACCCTGTGCCCACCTCCTGGCTCTGGCTGGCTGTTGGCACCCCGCACCCGCGGGTTCCCTATTGCAGCACCGGGAAGGCCTTTCGGGGTTGTAGAGCAGCAGAGACAACTTGCAACATCAACAACACATTTGGCCAGGAACTGCTAATAAACATTCAGTGCAGTGGTGGTTCAAGAAGTTTTGCAGAGGAGACAGGAGCCTTGAAGATGAGAAGCATAGTGGCCAGCCATCAGAAGTTGACAACAACCAACTGAGAGCCATCATCGAAGCTGATCCTCTTCCAGTTACATGAGAAGTTGCCTAAGAACTCAATGTTGACCGTTCTAAAGTTGCTCAGCTTTTGAAGCAAATGGGAAATGTGAAAAATAAGTGGGTACATCATGAGCTGACCATAAATCAAAAAAATCGTTGTTTTGAAGTGTTGTCTTCTCTTATTCTACTCAACAACAATAAACCATTTCTCGATCAGATCATGATGTGTGATGAAAAGTGGATTTTATAAACAACCAGTGATGACCAGCTCAGTGGCTGGACTAAAAAGAAGCTCCAAAGCTCCCAAAGCCAAACTTGTACCAAGAACAGGTCATGATCACTGTTTGGTGGTCTGCTGCCAGTCTGATCCACTACAACTTTGTGAATCCCGGCAAAACCATTACATCTGAGAAGTATGCTCAGCAAATTGATGAGATGTACTGAAAACTGCAATGCCTGAAGCTGATACTGATCAACAGAATGGGCCCAGTTCTTTTCCACGACAATGCCCCACTTCTCCTCGCATAACCAATGGTTCAATCATTGAATGAATTGGACTTTGAAGTTTTGCCTTGTCCGCCATATTCACGTGACCTCTCACCAATCAACTACCACTTCTTCAAGCATCTGGACAACTTTTTGCAGGGAAAACGCTCCCACAACCAGCAGGATGCAGAAAATGCCTTCCAAGAGTTCATTGAATTCTGAAGTATGGATTTTTACACTACAAACTTATTTGTAAACACATTTATTTCTTGTTGGCAAAAATGTGTTGATTGTAATGGTTCCTATTTTGATTAATAAAGATGTGTTTGAGCCTGGTTATAATGATTTAA TCONS_00104641 r 5' 573 TCONS_00104641 r 5' 573 EMBV3_09036 TTATTGTTCCTGAAATACACCCAGAGGCTTTTGGCACCCAGCACAGGCACAGCATCCAGC Gene BVV0102_105765 - 0 NULL GK000010.2:85536908-85645804 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15266 GCTAGCTAAAATGAGACGCCTAAGCCACCTTGAGTGCTGTTGCTAAGAGTCCCCTGTCTT Gene GeneID:509610|GNPTAB:XM_002687634:785_cdna Constitutive 0 NULL GeneID:509610 5 GENE GNPTAB NULL N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits EMBV3_08545 GAACTGTTCATTGTCAGCAAAGCCAAGAGCCCCTGCACCAGTGAAAGTTTAAGAATCTTC Gene BVT0102_045922 + 0 NULL GK000002.2:21012003-21060666 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108023 TCONS_00244112 TCONS_00244109 2 XLOC_063933 XLOC_150357 Coding TCONS_00108023 XLOC_063933 NonCoding NonCoding - 2:21039693-21040124 - TSS79644 431 2 TCONS_00108023_1 53 1 0 0.048499798476885 0.0316898387274033 0.0146922435549536 0.00724895284942808 0.006025799920075 0.0027893003391672 0.00486494239040742 0.00403224544623818 0.00562591574598478 0.000155924316741656 0.00264053112060242 2.90368834069853e-05 0.000206375320541067 0.000615739170458061 0.000517939992977254 0.00329378777470897 0.000879549914489196 0.00411584057105922 0.00273804614905747 0.00474950570446028 0.00119269019251961 0.00303081561857077 0.00234850259206632 0.00200125501847234 0.0388530585939025 0.0250642394675952 0.0104773718983675 0.00141775093451205 0.000775312762460524 0.000437085730079233 NM_005342.2 HMGB3 Homo sapiens high mobility group box 3 (HMGB3), mRNA. 2e-131 471 85.42 0.993039443155452 0 noncoding ATACTGTTTATTTAACTTCAAAAACATTTCAACATTCTAAACATACAAAAAAAATAACAGAACATTGCAGATCGTATTTAGTACAGAAGATTCTTGAACTTTCACTGGTGCAGTGGCTCTTGGCTTTGCTGACAATGAACAGTTCTACAGTTTGTTTTAAAAAAAAACAAAACAGTTTAAAACTACCGCACTTCAACTAAAAAGGATCCAAAACACTTCTCATGTCTGCTGACCTCCCCCACCTACTCCACAGCTAAGAATGGCAGCGGGATGCTATGTCGCTATATACAAAAACAAGACAACCTGAAGCTAAATGGATGCCCACTGCAGTGTCCACAGGTCCAGCCCCACAGTGCACGCCCTGAGCTACAGCCCCTCTGGAAGGCATTGCCCCCACAGCCTCCACACCAAGCAAGGAGCATCAAGAGTGT TCONS_00101807 . 5' 7312 TCONS_00101807 . 5' 7312 EMBV3_41854 CTTGAAGAAGGACAGAAAGGAGTGGGCGACGGTAACAGGAAGAAAATTCAGCAGTCTTTT Variant GeneID:286803|TMEM189-UBE2V1:NM_001034042:8_cdna 93^621 1 EMBV3_02850 GeneID:286803 14 GENE TMEM189-UBE2V1 DDVIT1 MGC128699 UBE2V2 TMEM189-UBE2V1 readthrough EMBV3_43726 AGCCCTCAGAGTTCAACAGACAGATCTACGGTCACGTGCCGAATTCCGGTTAAAGCTGAA Gene GeneID:514903|DHRS13:NM_001075687:118_cdna Constitutive 0 NULL GeneID:514903 19 GENE DHRS13 MGC139505 dehydrogenase/reductase (SDR family) member 13 EMBV3_02138 CAGGTAGTAACCTTTTCCGGTTTTCTGGGTGTAGTCCTTGACTTCCTGCTGATGGTCCTC Gene BVT0102_138189 - 0 NULL GK000009.2:94620314-94881350 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16959 GATATTTGTGGGGACAAAAGGAATCCCTCACCTGGTAACCCATGATGCTCGTACCATCCG Gene GeneID:784731|LOC784731:XM_002689748:2_cdna Constitutive 0 NULL GeneID:784731 8 GENE LOC784731 NULL similar to ribosomal protein S4, X-linked X EMBV3_26562 ATTGCCCAATGTGGTCTATGGTCTTACTGCCATTCTGCTGGTCATGGGTGTGGATGCCCT Gene GeneID:510115|LOC510115:XM_002693401:62_cdna Constitutive 0 NULL GeneID:510115 15 GENE LOC510115 NULL similar to hCG2044604 EMBV3_13576 GACAGTCTGCTCAGCTCCATGATTATTGCCTGCTAAGCTGCGTGATTCCTGCCTGCTCAG Gene BVV0102_373372 - 0 NULL GK000018.2:11255069-11654911 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090302 TCONS_00066119 TCONS_00107073 3 XLOC_055083 XLOC_040837 XLOC_062984 NonCoding TCONS_00090302 XLOC_055083 NonCoding NonCoding - 18:43804220-43805696 - TSS67648 1476 1 0 9.21795442219983e-06 0 1.88089336290001e-05 0.000108302737472675 0.000278190723264879 9.95645880422465e-05 0.00013709998674703 0.000211049564444574 0.000555648033484387 9.40812871331288e-05 8.0132008285381e-05 0.000143738167761894 8.08039443630033e-05 0.000794728926491798 0.000639800569491134 0 0 0 0 5.84669498796533e-06 0 5.86547830949684e-06 1.24309602778729e-05 0 0 0 9.92403367380736e-06 3.90454713580565e-05 7.67438964428798e-06 3.39445009718871e-06 XM_002707870.2 LOC100297422 PREDICTED: Bos taurus olfactory receptor, family 5, subfamily D, member 13-like (LOC100297422), mRNA. 7e-62 242 77.35 0.208672086720867 0 noncoding 0 0 0 0 -0.176476748647111 0.210232824462978 -1.30064268873586 3.16395183088253e-05 GATTCCTGCCTGCTCAGCTCCAGGAGTTTTATCTGCTGGGCTGCAAGATTCGTGTCTGCCTAGTCACGGGTGTTGAGCCTGCTGAGTCACTTGTTTATAGTCTGCTTAGCCACTTCATGGCAGTCTGCTCAGCTCCTTGATTTTTGCCAGCTGAGCTGCGAGATTCGTGCCTGCTCAGCTCCTTGTTTTTTGCCTGCTGAGCTGTGTGATTCCTGCCTGCTCAGCTCCATGAGTATTGCCTGCTGAGCTGCACGATTGGTGTCTGCTGAGCTACACGATGGGTGTCTGCTCAGTCACCGGTGTAGAGTCTGCTGCGTCACGTGTTTAGAGTCTGCTTAACCACTTCATTACAGTCTGCTCAGCTCCATGACGATTTCCTGCTCCTCTCCGTGATCAGTGCCCTCTTAGCCAAGTGATTAGTGCCTGCTCAGCTCTTTGATTATTGCCTCCTGAGGCACGTGATCAGTGCATGATAGCCACGTGATCAGCGCCTCTCAGTCACGTGATCAGCGCCTCTCAGTCAGGTTCTCAGGCATGATAGCCACCTGATCAGTGCCTGCTGAGTCACGTGATCAGTGCCTCTCAGTCACGTGATCAGTGCATGCTCAGTCACGTGATCAGTGCCTCTCAGTCACGTGATCAGTGCATGCTCATTCACATGATCAGTGCATGCTCAGCCACCTGATCAGGACCTGCTCAGTCAGGTGATCAGGGCCTGCTGAATCAAGGGATTAGCGCTTGCTCAGCTACATGATTAATCCCTGCTCAGCTGCGTGACTCGTGCCTGATCAGCTGTGTGATTAGTCCCTGCTCAGCTGCTGGATTAGTGCCTGCTCAGGTCCGGATTAGGAGTCGGCTGAGTGACGTGATTAGAGTCTGCTTAGCCACTTCATTACAGTCTGCTCAGCTCCATGATTATTGCCTGCTAAGCTGCGTGATTCCTGCCTGCTCAGTTTCTTGAAAATTGCCTGCTGAGCTGCGTGATTCCTGACTGCTAAGCTCTATAGTTACTGCCTGCTGAGCTGCGTGATTCCTGCCTGCTCAGTTTCTTTATTATGGCCTGCTGAGCTGCGTGATTCCTGACTGCTAAGCTCCATAGTTACTGCCTGCTGAGCTGCGTGATTCCTGCCTGATCAACTTCTTGATTATTGCCTGCGGAGCTTCGTGATTCCTGCTTGCTCAGCTCCATGATTATTGCCTGCTGAGCTGCGTGATTCCTGCTTGCTCAGCTCCATATTTATTGCCTGCTGAGCTGCGTGATTCCTGCCTGCTCAGCTTCTTGATTATTGCATGCTGAGCTGCGTGATTCCTGCTTGGTCACCTCAATGATTATTGCCTGCTCAGCTCCGTGATTCCTGCTTGCTCAGCTCCATGATTATTGCTTGCTGAGCTGCGTAGTTAGTGCCCGCTCAGTCCCGAGAGAGGAGCCGGCTGAGTCACGTGATTAGAGTCTGCTTATCCACTTCATTACAGCCT TCONS_00083308 . 5' 28564 TCONS_00083308 . 5' 28564 EMBV3_20165 ATGGTGACCAACAGGGGGCGCAACAAAATCCTAAGAGATGTGGACAGAACCAGGCTGGAG Gene GeneID:504968|ABLIM1:XM_002698530:187_cdna UTR3_Alt 2 NULL GeneID:504968 26 GENE ABLIM1 NULL actin binding LIM protein 1 EMBV3_43201 AGTAAGCTGGACCCCAAGCAGTAAAACGTCTTGCCTAGCTGTAGACGGTGATGTTGTGGT Gene GeneID:100336796|LOC100336796:XM_002694295:384_cdna Constitutive 2 NULL GeneID:100336796 16 GENE LOC100336796 NULL hedgehog acyltransferase-like EMBV3_07412 CAGGACTGGAGCCCGGCGAGCTGCAGCCAGGTGGTGATCAATGGAGGGGCCACATCCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18233 CTTTCGTCTTGTGCTGACTTTCTCCTGTCCTCTTCCAGTTTAGAATAAGACAGGGCAGGA Gene GeneID:507114|KIAA1967:NM_001075298:58_cdna Constitutive 0 NULL GeneID:507114 8 GENE KIAA1967 NULL p30 DBC protein EMBV3_10536 AGCTTGAGCTGCTGCGAGATTGGAGGGCTGAGCGGCTCTTCGACCTATACTACTATGATG Gene GeneID:615509|MGC151975:NM_001080319:28_cdna Constitutive 0 NULL GeneID:615509 4 GENE MGC151975 NULL UPF0526 protein EMBV3_13043 CCAGTCAGCTGGCAGAGCTCAAGGAGCAGATGACAGAACAAAGGAAGAATAAGCAGAGAC Gene GeneID:100336632|LOC100336632:XM_002687745:91_cdna Constitutive 0 NULL GeneID:100336632 5 GENE LOC100336632 NULL inositol 1,4,5-trisphosphate receptor type 2-like EMBV3_28700 GTCCTAAAGAGGCTGTGATTTTCAAGACCATCCTGGGCAAGGAGTTATGTGCAGACCCCA Gene GeneID:281043|CCL2:NM_174006:170_cdna Constitutive 0 NULL GeneID:281043 19 GENE CCL2 SCYA2 chemokine (C-C motif) ligand 2 EMBV3_13717 GAGGGTACTACGAGAGTACAAGTTGCTTTATACATGTAATGTTCAGTTGAGTGAAGCTGC Gene BVV0101_043111 + 0 NULL GK000002.2:90989215-91026977 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102922 1 XLOC_061980 Coding TCONS_00102922 XLOC_061980 Coding Coding FZD7 2:90986696-90991157 o TSS76541 4461 1 TCONS_00102922_2 574 0.0327280878726743 1 0 2.26844769951015e-05 1.12625311618527e-05 2.14604906022588e-15 0 2.2134795332608e-06 0 1.11828138421502e-05 0 1.06121551656072e-05 6.64828973221986e-05 2.62276998294257e-06 9.28875960284742e-06 0.000146004856515171 0.000468184574392182 0.000174396674883076 0.00188865474526735 0.00177150514252853 0.00224931362501012 0 1.24343048124043e-27 1.13417085092162e-07 0.00113613991022971 0.000821914095962303 0.00042090032859337 0 8.41992386912822e-25 5.60423718308554e-06 8.39726686334552e-05 8.48821332021965e-05 0.000319412774248121 NM_001144091.1 FZD7 Bos taurus frizzled family receptor 7 (FZD7), mRNA. 0.0 3981 100.00 0.494507957856983 NM_003507.1 FZD7 Homo sapiens frizzled family receptor 7 (FZD7), mRNA. 0.0 4774 87.48 0.867966823582156 TCONS_00102922_2 sp|O75084|FZD7_HUMAN FZD7_HUMAN Frizzled-7; 0.0 1095 99.08 0.942508710801394 2 coding 0 0 0 0 -0.12436665690907 0.337229112555568 -0.000730456074549718 0.987804429859541 TCAGTGAGTCAGGAGACTTGGGCAAACTTTGAAGGGTAACCGGAGACGCTTGTTGCTTCTCGCCGCAGAAAAAGCCGCACCGTTACGTCGCATCGAGAGGAGAAGGCGGCCCCCCCATCTGCGCCCCCAGCCCAGGGAGACGAGTTTGGACCCCAGGCGGCTGCGCCAGTGCTGGGCGGAGGCGGCGGCGCCCCCGTGGCGCGAGCACCCCAGCTGCAGCGCCCTCTGTTCCGCGCCGCCCACGGCCCAGCCCCGGCGCCTGGAGGACTCTCATGCGCCCGGCGCAGCGGCGCCTCCCCGGATCCCAGCCGCTCCCGGCTGCCTGGTCGCATTTCTCGGGCTGAGAGTGCCGCTGCACCCGCGGCCGGCGATGCGGGGCTCCCGCGCGGCGGCGTCGCGCTTGCCTCTGGACCTTTGCACCGTGGTGCTGGCGCTGCTGGGCTCACTGCCCGCGGGCGCCGGGGCGCAGCCGTACCACGGAGAGAAGGGCATCTCAGTGCCAGACCACGGCTTCTGCCAGCCCATCTCCATCCCCCTGTGCACGGACATCGCCTACAACCAGACCATCCTGCCCAACCTGCTGGGTCACACGAACCAAGAGGAAGCGGGCCTCGAGGTGCACCAGTTCTACCCGCTGGTGAAGGTGCAGTGTTCACCCGAGCTGCGCTTCTTCCTCTGCTCCATGTACGCACCCGTGTGTACAGTGCTCGACAAGGCCATCCCTCCGTGCCGCTCTCTGTGCGAGCGTGCCCGCCAGGGCTGTGAGGCACTCATGAACAAGTTCGGTTTCCAATGGCCTGAGCGGCTGCGTTGCGAAAACTTCCCCGTGCACGGCGCTGGCGAGATCTGCGTGGGCCAAAACACGTCGGACGGCTCCGGGGGCGCGGGCGGCGGCCCCACCGCCTACCCTACCGCACCCTACCTGCCCGACCTGCCCTTCACCGCGCTGCCTCCGGGGGCCGCTGACGGCCGGGGCCGCTCCGCTTTCCCCTTCTCGTGCCCCCGCCAGCTCAAGGTACCCCCCTACCTGGGCTACCGCTTCCTGGGCGAGCGCGACTGCGGCGCCCCTTGCGAGCCGGGCCGCGCCAACGGCCTTATGTACTTTAAGGAGGAGGAGAGGCGCTTCGCCCGCCTCTGGGTGGGCGTGTGGTCTGTGCTGTGCTGCGCCTCGACTCTCTTCACCGTGCTCACCTACCTAGTGGACATGCGGCGGTTCAGCTACCCGGAGCGGCCCATCATCTTCCTGTCGGGCTGCTACTTCATGGTGGCCGTGGCGCACGTGGCCGGCTTCCTGCTGGAGGACCGCGCGGTGTGCGTGGAGCGCTTCTCCGACGACGGCTACCGCACGGTGGCGCAGGGCACCAAGAAGGAGGGCTGCACAATCCTCTTCATGGTGCTCTACTTCTTCGGCATGGCCAGTTCCATCTGGTGGGTCATCTTGTCGCTCACTTGGTTCCTGGCGGCCGGCATGAAGTGGGGCCACGAGGCCATTGAGGCCAACTCGCAGTACTTCCACCTGGCCGCCTGGGCTGTGCCCGCTGTCAAGACCATCACCATCCTGGCTATGGGCCAGGTGGACGGGGACCTGCTCAGCGGGGTGTGCTATGTGGGCCTGTCCAGCGTGGACGCGCTGCGGGGCTTCGTGCTGGCGCCCCTGTTCGTCTACCTCTTCATCGGCACGTCCTTCCTGCTGGCGGGCTTCGTGTCTCTCTTCCGCATCCGCACCATCATGAAGCACGACGGCACCAAGACCGAGAAGCTGGAGAAGCTGATGGTGCGCATCGGCGTTTTCAGCGTGCTCTACACGGTGCCGGCCACCATCGTTCTGGCCTGCTACTTCTATGAGCAGGCCTTCCGCGAACACTGGGAACGCACCTGGCTCCTGCAGACGTGCAAGAGCTACGCGGTGCCCTGCCCGCCCGGCCACTTCCCGCCCATGAGCCCCGACTTCACCGTCTTCATGATCAAGTACCTGATGACCATGATCGTCGGCATCACCACTGGCTTCTGGATCTGGTCGGGCAAGACCCTGCAGTCGTGGCGCCGCTTCTACCACAGACTCAGCCACAGCAGCAAGGGGGAGACTGCGGTATGAACCCCGGCCCCTCCCCCACCCTTCCTTCCCGCCGCCGGGGGTGGGAAAGGGGCGGTAGGGAAAGAACTGCGGGGTGGGGGGACTTGTTTCTGGAACCTCCTTCCGCTCCAGTGAGAAGTGACCTGGAAATGAGAAGATATATGTAGATATATGTGGGTTGGGAAAAGAGGCCTGGGTGGAAAGACGGTTTGGATGAAAAGACTTCTGGCAAAGACTTGCAGGATGATGCTGGTGATGTTAACAGTGACGTTAATCATGTGCGGTACGGGCCGCCCTGGGCCTGTCGAAAAAGATTGAGATCAGAAGGTTGCTGTGAGTTCTTCCCGGCTCTGGGCCGAACTGGGACTGTGAGCGATTCCCCTGATGCAAGACAAGTGGCCTGTCCTCACTCCTGTGAGGCCCGGGTGAAAGGTACAGCTATCTGCGGCCGCCGCTTTGTTGGGAAAAGGGAGGACTCCCTGCAGTGTCCTTGTCAAGCGGTGGTCAAACCATAATCTCTTTTCACTGGGGCCAAACTGGAGCCCAGATGGGTTAATTTCCAGGGTCAGACATTACAGTCTCCACCTCTGCCTCCTCCCCGCCTGTTTTTCTTCCTCTACTCCTTTCAAGTCTTGTAAAATAAGCATTTTGAAGTCTTGGGAGGCCTGCCTCCTAGAATCCTGATGTGAGGATGCAAAAAGAAATGACAACATTTTGCAACAAGGAAAAGGAGGCTAGTAGTAGGTATTTCTACTACTTTTTTATTTTCTGGGGAAGCAGGCAGAAGAAAGAAGGCTGTTTTATTTGGTTTAATATCCTGAAAAGAAGTGATGACTTGTTGCTTTTCAAAACAGGAATGCATTTTTTTCCCCTTGTCTTTGTTGTAAGAGACAAAAGAGGAAACAAGTGTCTCCCTGTGGAAAGGCACAACTGTGAAGACAGCAACTTTTATAGGCAAAGCAGCGCAAATCTGAGGTTTCCCTTTGGATGTTAATTTGGTTGTAATAAACATTCCTTTTTAAGGAAAAGTGAAGGGCGCTGTGCTTCCATACCCCTTTCTGTCAGAGGTACTGACTTGGCTAAAGGAAATGCAAGGGGTTTTGCTGTGTTTAAGTAAATTTAATTCAGAACACATGATCCAACAGGCTCTGTTAAAACATTCAGGGAAATCTCTCCCTTCATTTTCTTTTTCTTCCCTTAAACCTGCATTTAGGTTTTGTTTTTCGATTTTTTTTTTCCTTCCAATTTGAATCCTCTAAGATAAAAGGAGAAGCATAATGCCTTTAGCCTCATAATAAAGGAACGTTAAATTTTTTTAAAAGTCAAAGGAGCATTTTGTCCTGTTTTCTTTGTTCCATAAATCCGTTTATAAAATATCATGTGTATGCTGACCCTGTCTTTGTGTGGCTGGGTGGGGAGGTGACCTGCAGAAATGACAGTGAGTGAAGAGGACAGTTCAAACCATGGGCCTCATTTTTAAGGAAAGTCGTTAAAAGAAGGTAAACTTCAAAGTAAGTCTGGAGTTCTTTGAAATGTGCTGGATGACTTAAATTTATTAATCTTAAATCATGTACTTTTTTTCCCTCTATAATAGAACTCCAATTCCTTTGCATAATGGTCTAAAGCTGAACAGAGAATCATGGGAGCTAACCTTTACTCCACCTTTGACATCACCTTCCAATCCAGCAACACTATCCTGTTTCTCAAAACGGTCTTTAAATGCTGTTTGAAACAGTTTTTAAATCATAGAGGGTACTACGAGAGTACAAGTTGCTTTATACATGTAATGTTCAGTTGAGTGAAGCTGCTTTTTATATTAAAGTTTAACATTGACCTTATGTTTCTTAAACCTCCAAAACTGTCTCATTTGTCAGATTTTTAAAACGCCCACTACACAGTTTTTGGCATCTTTTGTGTTATATCTCTTGCATGTGAAATTTGTAAAATAGAGACGAGTGCAGTATGTATATTTTGTAAATCTTCCATTTTTGTAAGAAAATATATATTGTATTTATACATTTTTACTTTGAATTTTTGTTTTGTTTTGCCTTTTAAAGTCTACAAGGAAGCCCCACTTTATCACATGTACAGATCACAAATAAATTTTTTTTTTTAATACAAAGTGAACGTTTATTTAGTTTATAGTTCCTATATAAGCCAAAGAACAGAATTTTGTATTATGGAAAGATGGTATGGAGGGACACCCACTGAATATGTCCCTCATAAAAGAAGACACTTACTCCTTGGAAGGAAGGTTATGACCAATCTAGATAGCATATTGAAAAGCGGAGATATTACTTTGCCAACAAAGGTCTGTCTAGTCAAGGCTATGGTTTTTCCTATGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGT TCONS_00102923 s 5' 0 TCONS_00102923 s 5' 0 EMBV3_21012 CTCCGTAAGGCCTCCCCCAATTCCACTGCTCCCAAAACAGAGTGGGGTTCGTTATCAAAA Gene BVT0101_055945 + 0 NULL GK000008.2:29844938-30010800 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01684 GATTTGAGGAGGCTGGTTGCGTGAAGGACATTTGAGAAGTGATCCTGGCTTTCAGGAGAG Gene GeneID:506406|GSR:NM_001114190:7_cdna Constitutive 0 NULL GeneID:506406 27 GENE GSR NULL glutathione reductase EMBV3_13209 AAACCCAAGGCTGTGCTCATCACCTATGGGGACACCTCCCTTCTCAAGGACCTGGGCCAG Variant GeneID:514636|C25H16ORF13:NM_001038106:165_cdna 602^691 7 EMBV3_10562 GeneID:514636 25 GENE C25H16ORF13 MGC134534 chromosome 16 open reading frame 13 ortholog EMBV3_08444 TGTAACATCAATATCTGGGTGTCTCCAGTCCTGCCTTAGGCCCTCTCCCTCCTATTCTGG Gene GeneID:281019|BCAN:NM_173996:19_cdna Constitutive 0 NULL GeneID:281019 3 GENE BCAN NULL brevican EMBV3_36915 ACTTCGAGAATAATCCACAAGGACCCGCCACAGAGCACAAGAAACCCTCTCAAAACTCTG Gene BVT0102_196402 + 0 NULL GJ057690.1:1-1601 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06827 TGCTGTTTCCCTGCCCCGTCCCCTGCTCCTGGAATGGTCTCAAGTAGCGATTCTGGACTT Gene BVV0102_163474 + 0 NULL GK000025.2:39309367-39343632 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147376 1 XLOC_089351 NonCoding TCONS_00147376 XLOC_089351 NonCoding NonCoding - 25:39339577-39340402 - TSS109972 710 1 TCONS_00147376_1 79 2 0.140776699029126 2.6074597529773e-24 0 0.000364935520713632 0 0 1.00729574580183e-05 1.65206503613612e-11 7.89289756024926e-11 0 0 0 0 0 0 0 0.00174836794411315 0 3.53198318708467e-05 4.80817424372375e-08 3.03784031201021e-05 0.000495974577766105 0.000184405722212422 0 0 1.02546754670899e-09 9.91605565534793e-06 8.2459000745942e-06 0 0 0 XR_229872.1 LOC101907300 PREDICTED: Bos taurus uncharacterized LOC101907300 (LOC101907300), 0.0 1002 100.00 0.780281690140845 0 noncoding GCTGTTTCCCTGCCCCGTCCCCTGCTCCTGGAATGGTCTCAAGAAGCGATTCTGGACTTCAGGTTTCTGAGGTCCTGGGAAGGACTGGGCTTGAGCAGCTCTCCCGCTCAAGAGAGGGGAAGTGACCCAGTGAGGATTCCACAGCAAGAGCGAGCACAGGCGGGTGCCCAGCCTCCTGGATCATGCCGCTCCTGAATCCCGCACACCAGCACCAACCAGCCAGGCATGTTTCCAGGGAGGAACAGCCCCGGACAACACCCCGAATACAGCAAGTGCTGGCGCCCCAGACGGAAGCAGAGAGGCAAGGCCCTCTGAGGAGGTCCCCAGCCAGCCACAGGGAGCCGAGAGGCGGGAGGGCCGGCCGGGCCTCGTGCTCTTGGGTCTCAGCCAGGCCTTGGTCCCCACCCCAGCCAGGCCTCTAGCCAGAGTTTCTCCCAGGGCCGGTACTGGGCGGCCTCCAGAGCCTCAGCCCGCCCTGGACCTCCCCGCCTCCCTGAGGCTCATCTACTCAAGGGGGATCCCTGCCCCGGAGAAACCGGGAACTTCTGACCCTCCTTGGGAGTGTTTTAAAAAATCCTTCAAAACTACCCTCTCTCTTCCTGTCCCCCAGGGCACCCAGAGAAAAGCCGCCCTCCTGAGAAGTTCCCAGCCTGGCTTATTTGGTTGAATTTTTTCAGAAACAGACATGAGGTTCCGTGGGCATCCCCCCT TCONS_00145598 r 5' 3410 TCONS_00145598 r 5' 3200 EMBV3_07001 GACGCACTCTCTACGGCTTCGGCGGTTAAGTTCCAGGCAGCCATTTGGCATAGTCTAATA Gene GeneID:617875|LOC617875:NM_001099724:158_cdna Constitutive 0 NULL GeneID:617875 23 GENE LOC617875 MGC159482 histone H4-like EMBV3_04404 GCGAAGTCAAGTGGGCCTTAGGAAACATCAGTATAAACAAACCTAGTGGAAGTGGAGGAA Gene GeneID:282472|SLCO1A2:NM_174654:10_cdna UTR3_Alt 3 NULL GeneID:282472 5 GENE SLCO1A2 SLC21A3 solute carrier organic anion transporter family, member 1A2 EMBV3_41152 GCAGACCCACAAGTGGAAGTCTCTTGATGATGGTGTCAGTGGTCTCATCGAATACAACCC Gene BVT0102_110903 + 0 NULL GK000030.2:133984286-134023356 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245802 TCONS_00245803 TCONS_00245800 TCONS_00245801 1 XLOC_150831 NonCoding TCONS_00245800 XLOC_150831 NonCoding NonCoding LOC100847435 X:133998789-134023137 = TSS184440 429 1 TCONS_00245800_1 58 0.414918414918415 2 0.98246190495749 0.000200330201028284 0.000501066197878117 0.000267983182250826 0.000253419003229406 0.000366927307706665 1.32922947932595e-05 0.000149530974638082 0.000122395238240763 5.40328542424976e-05 0.000403977140959139 0.00086366156152577 0.000407119170358709 5.68506292900269e-05 0.000130081421513265 2.28727408050599e-05 0.00135203373170164 0.00113912293913527 1.06326028515622e-42 0.000117008203482753 0.000117342610932688 9.90682900223006e-05 0.000493819744118419 0.00319460115716482 0.00363979079589191 0.00025143078639607 0.000379288921539171 0.000298390416593818 0.00139160944633334 0.000715851825713739 0.00304432013338147 XR_240880.1 LOC101907068 PREDICTED: Bos taurus uncharacterized LOC101907068 (LOC101907068), 7e-125 450 100.00 0.578088578088578 NM_032796.3 SYAP1 Homo sapiens synapse associated protein 1 (SYAP1), transcript 1e-08 64.4 79.45 0.167832167832168 0 noncoding 0 0 0 0 -0.0528528368431259 0.653333136849171 0.0352239503378474 0.452874988330428 GTGAAGACCAAGCACAGAAGCCCAACCCAGAGAAAGCTCATGCTCTGGAAGCTGAACGTGAAGGAAACACAGCACAGTGGAAGTAACAAGAAGCCTAGCATGCTGGAAAGCAGGACAGCAAAACCAGCTCGGCAGGAAGCTCACGCGGCTCAGTCTCAGATTCCAGAAGACCTCCGGTTAAGGATTGCCTCAAAAGTTGACGGACAGCACCTCTGAGTAATCAGCAATTGCAGACCCACAAGTGGAAGTCTCTTGATGATGGTGTCAGTGGTCTCATCGAATACAACCCAAGTGATTCTAGCTGAGGAAGTCTGGCTTCTTTGTGGGAGCATATCTCAAACTACAAACCTAAACAGCTAATTCCTGTTGACTATATCTGCCAGAGGACTATAGACTAATTTTTATGGGATCAAGAATATAAATAAGTAC EMBV3_19279 CAGCTGCAGCTGCTGCAGAGTGCGTCCACAGGTGCTAACACCTGAGGGGGCAGTGAATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43147 CTACTGTCTCAAGATTTAAATTTTAATGCAGAGTACTTTATTGGTCTGAGGCACACAGGT Gene GeneID:534360|LOC534360:XM_002684745:202_cdna Constitutive 2 NULL GeneID:534360 1 GENE LOC534360 NULL similar to poliovirus receptor-related 3 EMBV3_30199 GGGCACCACAAAGTCTTCTCCACCTTTGCCTCCCACCTGACCACCATTACTGTCTTACAT Gene GeneID:100297422|LOC100297422:XM_002707870:19_cdna Constitutive 0 NULL GeneID:100297422 28 GENE LOC100297422 NULL similar to olfactory receptor 73 EMBV3_00781 AGTGTGGAAACAAGAAAAAGATCAGTGAAGGAGTGAGGAATAGTAGGCAGAGCACAGAGG Gene BVV0102_237442 + 0 NULL GK000030.2:78188380-78263222 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10010 GAGCAGTGGAGGCAAGGAGAGCTGATGAGGCCCCACACCCCCGGGGCTGCAGGGAAGGCC Variant GeneID:507840|SSNA1:NM_001015539:65_cdna 314^543 1 EMBV3_38983 GeneID:507840 11 GENE SSNA1 MGC134401 N14 NA14 Sjogren syndrome nuclear autoantigen 1 EMBV3_42689 TAGGGTGTGCAGACTTTAGCAGTTGTGGCTCCCAGGCTCTACAGCACAGGTTCAACAGTT Gene BVT0102_154744 + 1 EMBV3_32208 GK000019.2:10461302-10546156 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098675 1 XLOC_058919 NonCoding TCONS_00098675 XLOC_058919 NonCoding NonCoding - 19:10477429-10478086 - TSS73051 657 0.914764079147641 1 0 0.000372759973585998 0.00146826492903174 0.000366215287582069 4.21316942586815e-06 0 2.72226681216976e-05 8.87626686630579e-06 2.70079035290001e-05 0 0 0 0 7.86104075327159e-05 0.000365700742077832 0 0 0 0 0.000496616946747309 0.000109458534368122 0.000706950878726558 0 0 0 1.05456179159891e-05 0.000686316823623577 4.45901405778972e-05 0 0 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 7e-115 417 93.86 0.41400304414003 0 noncoding 0 0 0 0 -0.367937287511652 0.0579060248731922 0.000773433267066054 0.987171052354064 CTTAATCATGGCTAATTAGGATGCAATAGAAGATTGAGGCGGAGAAGGCAATGGCACCCCACTCCAGTATTCTTGCCTGGAAAATCCCACGGACAGAGCCTGGTAGGCTGCCGTCCATGGGGTCACTAAGAGTCAGACACAACTGAGGACTTCACTTTCACTTTTCACTTTCGTGCATTGGAGAAGGAAATGGCAACTCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGCCTGTTACCTCAGTGTTCATAGCAGCATTATTTACAATAGCCAAGATATGTGAGCAACCTAAGTGCCCATCAACAGAGGAATAAATAAAGAAGATGTGGTAGGGCTTGCCTGGTGGCTCAGTGGTAGATAATCTGCCTGCGGATGCAGGAGACATGGTTTCAGGCCCTGGGGGGATCTCACATGCTGAAGAGGGACTAAGCCCGTGTGCCACAACTGTTGAACCTGTGCTGTAGAGCCTGGGAGCCACAACTGCTAAAGTCTGCACACCCTAGATCCTGTGCTCTGCAGCAAGAGAAGCCACTGCCCTGAGAAGCCTCCCACCTCAACAAAGAGCGGCCCCCTACTC TCONS_00092170 . 3' 14652 TCONS_00092170 . 3' 15308 EMBV3_16679 GCATTGCCCGTCTGTCCTGTTCTGATATCTCCATCAATGTCTGGTATGGCTTGGCAGCTG Gene GeneID:617763|LOC617763:XM_002693208:406_cdna Constitutive 0 NULL GeneID:617763 15 GENE LOC617763 NULL similar to olfactory receptor, family 52, subfamily B, member 6 (predicted) EMBV3_26923 GACCCTGCGATCAGAGTCTGAAATCAGAGGAACCCGGACGTTCCTGCCTCACCTGGAGAT Gene BVV0102_433326 + 0 NULL GK000017.2:36910602-37149471 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00238289 TCONS_00080098 TCONS_00217532 TCONS_00162571 TCONS_00200854 TCONS_00063807 6 XLOC_144956 XLOC_048982 XLOC_131531 XLOC_099452 XLOC_122505 XLOC_038533 NonCoding TCONS_00080098 XLOC_048982 NonCoding NonCoding - 17:37120691-37121809 - TSS60038 1118 1 TCONS_00080098_2 78 1 0 4.78753310707479e-05 9.4932339466094e-06 3.43843363013195e-05 6.06723695704804e-05 9.08988479709594e-05 6.51622043694459e-05 5.11705138933887e-05 0.000183253491462736 0.000182535013518509 6.81731190344836e-05 6.83946942535167e-05 9.87829255393725e-05 2.67502466787108e-05 0.000166312604361232 0.000148086674799101 0.00241017982236107 0.000337250628166226 0.00122244424164627 9.19664755724166e-06 7.06056940996818e-05 1.47837106007788e-05 0.000312153434511185 0.000488458609486617 0.000555318184846704 2.63112376039151e-05 3.96200823018996e-05 2.60508865532784e-05 6.2278174362547e-05 0.000192546472292626 0.000120648690903383 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 3e-39 167 74.63 0.237924865831843 0 noncoding 1 1 1 1 -0.069690739815313 0.656150057551822 -1.10078665842033 0.00368417958290911 GCCGTCGTACCTCGCGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACACCAGAGCCTCCCCCGTCATCGCGACTTGAGGGCCTTCGTCTCCTGTATGGCCTAGAGACCAGTCTCTCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCAAGAGCAGAGCGGAGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAATGCAACCCCGAGATCCCTTTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTGGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCAACACAAGAGGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCTGCAACTCGAGAAAATCCACGTGGTTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGTGTCTCAGGAGAAGTCCCACGTTAGGTATTGGAGGTCGAAAAAGGGACTTGGCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTGACGGTTAAAGAGGAACACCGAGGTTTTCCCGAACCACTTCCTCTGAGCACCCTTCTGCCCTCCTGATCTCGACAGGAGGGTCGACTCCGCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTAGCCTCGTGGGTGCTTCCACATTGTGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCACCCTGTGAATGAAGTCAACACGAAGGGGCAGTCACTCGTCCATGTATCGTCCGGAAAAACCCCCAGGTTCCAAATACTTCTCTATTAGTGGCCTCTCTCCCCGGGGAGACCTCTAGAGATAAGCGGAGTTCCATGCCACAACCCAAGACGAGGCCTGACTCTCCTGTTCCCAGTCTGCAGGGACCCTGCGATCAGAGTCTGAAATCAAAGGAACCCGGACGTTCCTGCCTCTCCTGGAGAT TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 EMBV3_32645 AAAGAAATACTGAGTACTTCTATACGTGGGCGTAGAGGAGTCTGCAGATTCTGTAGCAGA Gene GeneID:513212|CA3:NM_001034437:39_cdna Constitutive 0 NULL GeneID:513212 14 GENE CA3 MGC127744 carbonic anhydrase III, muscle specific EMBV3_41522 CCCTGAGGGTTATAGTCACTGCTGTAGTCCATGCCTAGGACTGCTCTTGCTACTTGATAG Gene GeneID:523328|CD151:NM_001035347:293_cdna Constitutive 0 NULL GeneID:523328 29 GENE CD151 MGC128855 CD151 molecule (Raph blood group) EMBV3_22197 CCTTTGAAAGGCCTTTTGCCATATGATAAGCACAAGCAGCGCTGCCCTGTGCTGGAGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24039 CCCACAGCTTCTCCCGAAGCCCTCTTGCCTCACAAACTATGGGACATTGCAGTCCAAAAT Gene GeneID:509703|GPR56:NM_001083656:168_cdna Constitutive 0 NULL GeneID:509703 18 GENE GPR56 MGC140208 G protein-coupled receptor 56 EMBV3_29700 CTCTACAACTCCCCTACATCTTTCCTGTCTGGTGTTTCCACTTCTGACCCCTGAGCAGCT Gene GeneID:100141057|KLHL33:NM_001166652:5_cdna Constitutive 0 NULL GeneID:100141057 10 GENE KLHL33 NULL kelch-like 33 (Drosophila) EMBV3_04166 GAAGAGGAACAAAGGCGGAAAGTACTCAGTGAAAGAAAAGGAGGATCTTCACCCAGACCC Gene GeneID:504415|CHL1:XM_002696954:90_cdna UTR3_Alt 2 NULL GeneID:504415 22 GENE CHL1 NULL cell adhesion molecule with homology to L1CAM (close homolog of L1) EMBV3_06840 CCACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTGCCACCACCCCAACTCAAATTAAA Gene GeneID:534677|GTDC1:NM_001076035:115_cdna Constitutive 2 NULL GeneID:534677 2 GENE GTDC1 MGC143010 glycosyltransferase-like domain containing 1 EMBV3_01429 TCTGATGACCAAAGCAGTGAGAAGGAGCGGAAAGAGGAACTGGATGAAATGATCGCCCAC Gene GeneID:538874|BMP10:XM_002691437:119_cdna Constitutive 0 NULL GeneID:538874 11 GENE BMP10 NULL bone morphogenetic protein 10 EMBV3_10251 TTTAAAGAAGAGCTCTCAGTCGTGGTCCTGCCCGTGAAACCTAAGGAAGCAGCACTATCC Gene BVV0101_035780 - 1 EMBV3_03646 GK000018.2:18809261-18810540 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085650 TCONS_00082514 TCONS_00082511 TCONS_00082512 TCONS_00082513 2 XLOC_051926 XLOC_051029 Coding TCONS_00085650 XLOC_051926 Coding Coding BRD7 18:18809355-18858230 j TSS63900 3026 1 TCONS_00085650_3 652 18 0.938453983713222 0.000876041437750978 0.000150729977398528 0.00040776571845592 6.82463795977499e-05 0.00065846527913847 8.85972982116877e-05 0.000775443053449193 0.000288242684158987 0.00203708998784007 0.000259824053495846 0.000154673819686419 1.98001962328603e-133 1.20483855022502e-05 1.30056025824353e-05 0.000373835568993968 0.000427684946314055 2.24935455592352e-120 2.83644848008211e-05 0.000208105112526624 0.000347534246952578 7.71788906263803e-05 0.00104142306019551 0.000659840632230001 0.00037465914279044 0.000477168933653473 6.95004728189085e-05 0.000167365356108566 0.000238216489485832 0.000388428650249001 1.22550767619532e-05 XM_005218615.1 BRD7 PREDICTED: Bos taurus bromodomain containing 7 (BRD7), transcript 0.0 4552 100.00 0.833773959021811 NM_001173984.2 BRD7 Homo sapiens bromodomain containing 7 (BRD7), transcript variant 1, 0.0 2915 91.52 0.677461996034369 TCONS_00085650_3 sp|Q9NPI1|BRD7_HUMAN BRD7_HUMAN Bromodomain-containing protein 7; 0.0 1179 92.01 0.996932515337423 2 coding 0 0 0 0 -0.0874303902395337 0.614379288750249 0.0226905475650939 0.681573607449504 GCTCCCGCCCTCCGCTCGCCTGGCCCGGACCGGAAGCGGCGCCGCACGGCCTGGGCCTGGCGCGGGGGGCGGGCACCGGGGCCCGATCGGACATGGGCAAGAAGCACAAGAAGCACAAGTCGGACAAACACCTCTACGAGGAGTATGTAGAGAAGCCCCTGAAGCTGGTCCTCAAAGTGGGAGGGAACGAAGTTACCGAGCTCTCCACGGGCAGCTCTGGGCACGACTCCAGCCTCTTTGAAGACAAAAACGATCATGACAAACACAAAGAGAGAAAGCGGAAAAAGAGAAAGAAAGGAGAGAAGCAGATTCCAGGGGAAGAAAAGGGGAGAAAACGGAGACGTGTAAAGGAGGATAAAAGAAAACGAGATCGTGACCATGTGGATATTGAGGCAGAAAAAGACCTACAGTGTCAGGCCCCTGTACGATTAGACTTGCCTCCTGAGAAGCCTCTCGCAAGCTCTTTAGCCAAACAAGAAGAAGTAGAACAGACACCTCTTCAAGAAGCTTTGAATCAACTGATGAGACAACTGCAGAGAAAAGACCCAAGTGCTTTCTTTTCATTTCCTGTGACTGATTTTATTGCCCCCGGCTACTCCATGATCATTAAACACCCAATGGATTTTAGTACCATGAAAGAAAAGATCAAGAACAATGATTACCAGTCCATAGAAGAACTGAAGGATAACTTCAAACTAATGTGTACTAACGCTATGATTTACAACAAACCAGAGACGATTTATTATAAAGCTGCGAAAAAGCTGTTGCACTCAGGGATGAAAATTCTTAGCCAGGAGAGAATTCAGAGCCTGAAGCAGAGCATAGACTTCATGGCAGACTTGCAGAAAAGTCGGAAGCAGAGAGACAGGACAGACACCTCACAGAGTGGGGAGGACAGCGGTTCCTGGCCAAGAGAGAGGGACGATGCTGGAGACGCTGAGGCACAGGGCTTCAAGAGCCCCAATAAGGAAAATAAAAAGAAAGACAAAGATGTGCTGGAAGATAAATTTAAAAGCAATAATTTAGAAAGAGAGCAGGAGCAGATTGACCGCATCGTTAAGGAATCTGGAGGAAAGCTGACCAGGAGGCTTGTTAATAGTCAGTGTGAATTTGAAAGGAGAAAACCAGATGGAACAACAACATTGGGACTTCTCCATCCTGTGGATCCTGTTGTAGGAGAACCAGGTTATTGTCCTGTGAGACTGGGGATGACAACTGGAAGACTTCAGTCTGGAGTGAATACTTTGCAGGGGTTCAAAGAAGATAAAAGGAACAAAGTAACTCCAGTGTTATACTTGAGTTACGGACCCTACAGTTCTTATGCACCACATTATGACTCCACGTTTGCAAATATCAGCAAGGACGATTCTGATTTAATCTATTCAACCTATGGGGAAGACCCTGATCTCCCCAGTGATTTCAGCATCCATGAGTTTTTGGCCACATGCCAAGATTATCCATATGTTATGGCAGATAGTTTACTGGATGTTTTAACAAAAGGAGGACATTCTAGAACCCTGCAGGAGTCAGAGACGTCATCTCCTGAAGATGAAGGCCAGACTAGGATACTTGACACAGCAAAAGAAATGGAGCAGGTTACAGAAGTTGAACTAACAGGATGTTTGGACTCCAATAATCAAGACAAGCTTACAGCACTGAAAGCAGTAACAAACTTCGGAGCTCCGGTTGAAGTTTTTGACTCTGAAGAAGCTGAAGTGTTCCAGAGGAAACTTGATGAGACCACCAAACTGCTCAGAGAGCTCCAGGAAGCCCAGAATGAGCGTCTGAGCACCAGACCCCCTCCCAACATGATCTGTCTCTTGGGTCCGTCATACAGAGAAATGCATCTTGCTGAACAAGTGACCAATAACCTTAAGGAACTTGCACAGCAAGTAACTCCAGGTGATGTTGTAAGCACATACGGAGTCCGAAAAGCGATGGGGATTTCCGTCCCCTCCCCGGTCATTGCAAACAACCTTGTGGATTTAACGGCAGATTTTGAAGAACCTAGAAAGACTGATGTTACTGAGTGTGAACCCGATGGGATTTGAATCTATCTGATTTCACTTCGAGGATTTATTCAAAAAGTGGCCTTGTGAGGAAGGAATGATGTGGACCTATTGGAACGCCGAGCAGAGAGTGGATGGGTGGGCCTGGGCAGAGTTCCTGCGGAGGAGGGATCGTGCTCCTGCGGAGGAGGGATAGTGCTGCTTCCTTAGGTTTCACGGGCAGGACCACGACTGAGAGCTCTTCTTTAAAATTACCATCCAGTGAGATTCCCGTTGTTACACCATGAAAACAAATGCAACTTTAGAATTTACTAGCGTGTCCCCCACATACGTGTTGAGGACGATGTCCTTATGTGGGAGGACCAGGGCTTCCCACCACAAAAGCAAAACAAAAACCATGTCAGGAGTTTCATAGCACTAACTTGTCTGGTGTTCCTTTTTGGTTTATTTTTGCCATTTGTAGAGGGGTTTTCCCAGTATAATAAAAGGACAAGCCAAATAGGAATCAAACTCAATTGTCCGTGAATATGTAAGGAAATCACCAAGCTTAAGGAAAGTTGATGTTGCTATTTACTGTTTTTCAACAGGTCACCTATGACTCTGCCATGCCCCCTTAACTGAGACTTATCTACTTTATCTGAAAGGCAACGGTTAAGTTCCTGAGCAGTTTAACTATTTAAGTAGGAAATGATACGTGGTCCTTTTCTATGACCAGGCACTAGAGGTAACCTAGTTCAGGGAACAAATCAAGTTTCAGACCCTACTCAGACTGTACGGAGCCCTTGTGTAAAACACCCAGGCTGGAAGCTGTTTTATTATTTTCTTGACTTTGAAAACTAACATTTAACAAGTAGGGTGAAGGAAAATTGAATCTCTCAAGAGAGTTAAGATGACCTAATCTTTCAAAAACATACTTGAAAGCATATGCCAGAGGAATTAAAGAATCCATTCAAATATGTATTTATCAATATTTATCAAGTCTTTTTAGAGTTTGTCTCTCGAATATAATTCAGGCAG EMBV3_10731 AAGACCCTAGGGGGAAAAATCCCTTTACTCATTTTGAGTTCCATTTGTCCAGTGGAGAGG Gene GeneID:534858|UTP23:NM_001076039:32_cdna Constitutive 0 NULL GeneID:534858 14 GENE UTP23 C14H8orf53 C8orf53 MGC142567 UTP23, small subunit (SSU) processome component, homolog (yeast) EMBV3_20106 GGTGTGAATTTTGTGGACATTTGGCAGGAGTTTTGGTTGGATTAGGAGAAACTCGTGATG Gene GeneID:509776|DCAF10:XM_002689728:79_cdna Constitutive 0 NULL GeneID:509776 8 GENE DCAF10 WDR32 DDB1 and CUL4 associated factor 10 EMBV3_18822 AGACTACAAAACAAGGAGGCTTTTCCTCGGGGGCTGAACCACCGCTTCCTGAGTTCTTGA Gene BVV0102_325906 + 0 NULL GK000011.2:11207041-11207524 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026940 TCONS_00026939 TCONS_00026941 TCONS_00026942 1 XLOC_015149 Coding TCONS_00026940 XLOC_015149 Coding Coding SMYD5 11:11207135-11213750 j TSS19214 2495 1 TCONS_00026940_1 237 0.0224448897795591 10 0.624281826428787 1.11780169098304e-08 0.00171089826296624 0.00329709937659888 0.00354863166153564 0.00213372556756324 1.41164975682753e-05 0.000479906597139123 1.63264062247668e-12 0.00100158673004523 0.00100655118246675 4.87891160784666e-05 0.000888265429795846 0.000366671448229219 4.84148116326131e-08 0.000159961247022618 0.00108481808814172 0.00154695390008864 1.29667633811839e-06 0.00108620793117789 0.0012574680434351 0.0021443691916345 0.000388538876886602 3.85094999535758e-05 0.00171555731428983 0.00285805749891767 0.00213016523051643 4.95839305179714e-08 1.02932981086605e-09 1.05993518068755e-05 1.91968940677732e-08 NM_001080248.1 SMYD5 Bos taurus SMYD family member 5 (SMYD5), mRNA. 0.0 3512 97.79 0.799599198396794 NM_006062.2 SMYD5 Homo sapiens SMYD family member 5 (SMYD5), mRNA. 0.0 1600 77.48 0.802404809619238 TCONS_00026940_1 sp|Q6GMV2|SMYD5_HUMAN SMYD5_HUMAN SET and MYND domain-containing protein 5; 3e-155 442 96.35 0.919831223628692 1 coding 0 0 1 0 -0.064000652077678 0.55516763708644 0.00292333784596344 0.958574185885671 TCTCTCCTTTATCCTTTCCTCCTTGCGTGTCTTCGCGGTGCTCAGCAGATGCAGCCATCTTTCTTAAGTTACCACTGCCTGGATTTTTCCTCCATTCTTAGGGCCAAACAGAGGAGTGTTCACTACCCGCCTGAGACTGCAAGCATAATGTTGATGGCCCGGATGGTGGCCACAGTGAAACAGGCTAAGGATAAGGATCGTTGGATCAGGCTCTTCTCCCAGTTCTGTAATAAAACTGCTAATGAGGAGGAGGAAATTGTCCATAAACTCCTAGGGGACAAATTCAAGGGTCAGCTGGAGCTACTGCGGAGACTCTTCACAGAGGCGCTTTATGAAGAAGCACTCAGCCAGTGGTTCACTCCGGATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATTGGGACCAGCTCCCTGAGCCAGTGGGTCCATGCCTGTGATGCTCTGGAGCTGAAGCCTGAGGACCGTGAGCAGCTGGACGCCTTCATTGACCAGCTGTACAAGGACATCGAGGCAGCAACCGGCGAGTTTCTTAACTGTGAAGGATCTGGCCTCTTTGTGCTGCAGAGCTGCTGCAACCACAGCTGTGTCCCCAATGCAGAGACCTCCTTCCCAGAAAACAACTTCCTTTTGCATGTCACCGCCCTGGAGGATATTAAGCCAGGAGAGGAAATCTGCATCAGCTACTTAGACTGCTGTCAGCGGGAGCGAAGCCGCCACAGCCGCCACAAGATCCTCAGAGGCCGATGAGCCCAACATGACCTCTGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGGAGAGCCGGAAGATGCCGAGCTGGGGGATGAGATGACTGATGTGTGATGTCACCCTGCTCAGAAGCACTCCTACCCCAAACCCTGCAGAAGAGGGGGCCTTTCCCCAGAGCAGAGGCTTGGAAGGAACACCCCACTCCTGTCGCCCACTTCCCCCCCATTTCAGCACTCTTTCTGCCGGAGGGTAAGACAGGCTGGACCCTAGGCCCTCTCCCCCCGCTGGACCTCACGCCCGGACACTGCTGCTGCGTGGCTCAGGCTCTGCGCTGTCACTGAGCCGCTCAGAACTGGCTTCCCCCTGAGGTTCGGATGTAAGTGGCTGGAACCAAGGTCAGGGCCTAACAGTGTTCTTCCCCATGGCCCCACTTACTCATCCGCTTGAGGCTTCAGCCCTCTCAACTCAGTATGGGGGGAGGGGGGCAGTAACAGAGTGGCAACCCGAGAACACCCTGACTCCACTGAAGAAGAGAGGGGCCAAGATGCCCTTACCGACTTCCCTACCTCCCACTGTTGTAGCCTGACCACTGGCACAGCCTAGAGAGGCAGGAGTGGGGAACTGGGCCCCACTGCACCTTCTCTTAAGCGCTCTGTGGGGAGCACTGAACCACGGGGATTACCCCCCTCTCCCCACCTCACCCATCGTTTAGACATCGGGGAGTAGCGATTAGCCCCTCCCCCAGAATCTCTGTACTTGTGCCTTTCCTCTAGGCCCTGGTACAGTGGCTAGCCTCACAGGGTCTGGAAGAGGTGTCTGCCTCCCTTGGGAGGGGTATGGGGGGATCAGCACCCCTCCTCTTACCCTCATCCATTTAGGACTCTAGCAGCATAGCTGAGACTTGGGGGGTGAAAGACCTCTGCTCCCTAACTGAGGATGTTCTAGAGTCTTCTAGAACTTTGATCAGTGAGGGGCTCTCCTGGTCTCAATCTCCATCTTTAGGATCTCCACAGAGGAACACAAGTCTTCCAGAAACCTAGAAGAGCTGGGCTGGATACTCAAGATTAGCCCTGACTGTCTTCCTCCTCCCCAGATTAGCACCACCCCTTGCTCTTGGGTTGGAAGCTGTGGAAATTGTAACCTGTCACCCGCAATTCTTTTCTGCCCCCCTTCCCTGAGGGGCCTGCCGCATGCCCCTGCTGAGGGATCCTAGGGAGGCCAGGTGCCGCCGCATGGGCCCTTTCTTGGATCGTGAGCAGGTGGAATCTGCCTGAATAGCCTATTGGGTTCTTAATTCTTCAGAGCAGCCAGCACCCCCTCCTCCCCCCCTGCCCACTGTTCTCAATAAAACATGAATGGTGACAGGCCTTTACAGGAATGCTTTGTGGAGGATGGCTTGACAAGCAGGCAACAGTCACGTGGATGGTCCCAGAATGCATAGGACAGAGCGGTGACGGCAGGAGATGGGAGCTCCAGCTCCCCAGTTTGGATTCATCCCTCGTCTCGTCTATATCTGCTGTGCAAACGTTTCTCAGGTCTAAGAGCAGGGCTCCTCTGAGGTCCAGTGTGGATCCCCAGGACCAGACTACAAAACAAGGAGGCTTTTCCTCGGGGGCTGAACCACCGCTTCCTGAGTTCTTGAGCAGGAGGCTGTCGGGATCCAGGATTAGCAGTCTGAGCACTGGTCCTGAAGGACCCTGGGCAAGCCTTGTACCCTCTCTGGGCCTCAGTTTCCTCCCTTCAAAACAAG EMBV3_26934 GATCCGTCGATCCCTTCTGCGGCTACTCTGATCAACATTCGCAATGCCAGGAAACACTTT Gene GeneID:539009|LOC539009:XM_002707837:2_cdna Constitutive 0 NULL GeneID:539009 8 GENE LOC539009 NULL similar to Ras-related GTP binding A EMBV3_42374 TCCCCAATGTGTCCCTATTCTGTCTTTCCCGGTCTCCACTATCCCCACTCCCGTTGTTAT Gene BVT0101_062216 + 0 NULL GK000012.2:54092573-54102933 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12394 TGCTGGAGATGGGAGCCCTGTCAGGGACATTTTGGCTGGTGGAGAGCCTTGTGGAGCAAA Gene GeneID:513939|GSDMD:NM_001046160:89_cdna Constitutive 1 NULL GeneID:513939 14 GENE GSDMD GSDMDC1 MGC137804 gasdermin D EMBV3_31676 AACTCCCTGGTGGGCCAGTGTTTAGGACTCTGTGCTTTCAATGCTAAGGGTGTAGGTTCA Gene BVV0102_052441 + 0 NULL GK000010.2:60113746-60140537 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23601 TTCAGGCCTTCACCCACGCTCCTGCTATGTTGGAAGCAGACAAAGGTGGCAAGTTTCACT Gene GeneID:539220|AHSA1:NM_001034666:129_cdna Constitutive 1 NULL GeneID:539220 10 GENE AHSA1 MGC127487 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) EMBV3_39109 TCTGTACTTGGGTTCCACATGTCAACAATTTCTCTCCTGTGTGTATGTTGGCCAAAGCCG Gene BVV0101_033821 + 0 NULL GK000011.2:93133251-93149375 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12442 AGTCATGGCAGATTCCAGTAACCACAAATCAAGCATCAAGATGAAGGGCACAGACCATGG Gene BVV0102_167452 - 0 NULL GK000005.2:79339686-80191842 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38818 AGACATCGAGTGTGAAGAGTGATGGGGCTGCGCATTTTGACTACCAGTTTGGCTACCGAA Variant GeneID:505690|LARP1:XM_002689324:45_cdna 762^839 1 EMBV3_09191 GeneID:505690 7 GENE LARP1 NULL La ribonucleoprotein domain family, member 1 EMBV3_26769 CTAGCCTGACAGTCCTCACACCAGACCAGCTGAACTCCACAGGCATCCCCCAGCTCTTAT Gene GeneID:617445|KAZALD1:XM_002698492:573_cdna Constitutive 0 NULL GeneID:617445 26 GENE KAZALD1 NULL Kazal-type serine peptidase inhibitor domain 1 EMBV3_31713 AGATAGAACCGTGTCTCTTCTGCTTTGTCTTTTCAGTTTGCTATTCCGGCAGCCATACTG Gene GeneID:518880|RBX1:NM_001046241:174_cdna Constitutive 2 NULL GeneID:518880 5 GENE RBX1 MGC127542 ring-box 1 EMBV3_08955 TGTCCATGTTGTATGGCATGTGGGAACTTAGTTTGCTGAAGAGGAGGTCTCCCCCAACTC Gene BVV0102_174248 + 0 NULL GK000003.2:79147217-79284898 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16684 CATGGGCCAGTGTGGCATCACCTCCTCCAAGACCGTGCTGGTGTTTCTCAACCTCATCTT Gene GeneID:513962|LOC513962:XM_002689620:27_cdna Constitutive 0 NULL GeneID:513962 8 GENE LOC513962 NULL hypothetical LOC513962 EMBV3_34405 GAAGCTCTTCTTCTAGGGGTTTACAATTTGCCTTCCAGCATTGGGTCCATGGCTCTGACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41794 CTTTGACGACAATGGCCGGAACTTCGACAAGAATGGGAACATGCTGGACTGGTGGAGCAA Gene GeneID:616991|MMEL1:XM_002694122:465_cdna Constitutive 0 NULL GeneID:616991 16 GENE MMEL1 NULL membrane metallo-endopeptidase-like 1 EMBV3_14270 AAACTGTTTTCCCCCTCGGGTTTCTATAAGAACAAGGATAGAATTCGATTCCGATATCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20398 TGGCCTCCAGGGAGGGTTTGCCCATGTCATTGAAGATCAGCACAAATTCCCACATTACTT Gene GeneID:522518|CWF19L2:XM_002692951:46_cdna UTR3_Alt 2 NULL GeneID:522518 15 GENE CWF19L2 NULL CWF19-like 2, cell cycle control (S. pombe) EMBV3_06410 AGGATTGAATATAGGGCCTGGGAGCCTGAGCAGAGAAAGAAAATAGAAGCCAAGTCCCAG Gene BVT0102_118480 + 0 NULL GK000030.2:82559475-82594046 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00252215 1 XLOC_155156 NonCoding TCONS_00252215 XLOC_155156 NonCoding NonCoding - X:82561801-82562637 - TSS189436 836 4 TCONS_00252215_2 47 0.604066985645933 1 0 0 0 0 0 0 0 0 6.43183662440667e-07 0 0 0 0 0 0 0 0.000431768252821106 0 3.0013047992139e-05 0 0 0 0 0.000131684879053911 0 0 0 0 0 0 0 XM_001252760.4 LOC784457 PREDICTED: Bos taurus proline-rich transmembrane protein 1-like (LOC784457), mRNA. 6e-104 381 89.82 0.32177033492823 0 noncoding 0 0 0 0 0.0192350068969561 0.869126640128057 0.0364694537151077 0.520596011810386 GTGGCATAACTTTTTAAATGAACTACTGGTATGTAGTAGAGCTAGGTTCCCAATCCAGGCAGCTCAGATTGCAAAGTTCATGTTCTTAAATTGGAACCAGGGAAAATGTACAACCTTAGGGCTTAGGCCTGGGACTTGGCTTCTATTTTCTTTCTCTGCTCAGGCTCCCAGGCCCTATATTCAATCCTTTTCATAACATAGACCCAATACCCTTGCATTATTCTCTTCCATCTATTCTATCTTGAGGCAAACTGGTCTATCTGACATTTGAAAAGCTGTATCAAGATGGAAGCATATTCAGGACCTTTAAGACTAAGCTAACCAAATATTGTCATTTTATCTATGAGGAAACAGAGGGTCTGAGTGGGGAAGGTAGTCTTTAAGGCAGTGAATGATAGAACTGAGACTCTAACTCGGGTTTGTTGACTCCCAGACCAATACTCTTTCACTAAAAAAATGTATGTTTGCTTATGCCTAGACAGTTTTTTTACGGAGAAGGTGATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAAGAGTCGGACACGACTGAGCGACTTCATTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGAGCCTGGTGGCTGCTGTCTATGGGGTCACACAGAGTTGGACACAACTGAAGTGACTTAGCATAGCATAGCATAGACAGTTTTTATGCATAAAAATTGTTTCAATTCTCCCTAAAGATTCAGCTTAAATGTCACCTCCTCCCAAAAGTCTTATGTTAT TCONS_00247360 . 5' 2328 TCONS_00247360 . 5' 2328 EMBV3_01828 AGCTGCTGGTGCCCTTGCTACCTACAAGAGTTAGAAATCCAAGCCCCTCCTGGTTCTATA Gene GeneID:521251|PLSCR5:XM_002685032:218_cdna Constitutive 0 NULL GeneID:521251 1 GENE PLSCR5 NULL phospholipid scramblase family, member 5 EMBV3_09540 CCCCTAAGTGCCTGCCCCTCCCCAGAGTATTAACGTTCCCAGAGTATTATTAACGCTGCT Gene GeneID:783470|TLN1:XM_002689679:96_cdna Constitutive 0 NULL GeneID:783470 8 GENE TLN1 NULL talin 1 EMBV3_29825 AAAACCTATGGAAAACAATACAAAGAAAAGGGTGCTTGTGGTTCTTGCTGGGCTTTCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14545 GCAGTCCTGCTGCCAGCTCTCCGACGGCGTCCCCGAGAGGGACTCTGCCGCCGGGGAACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13341 TGCTGCTCCGGGCTCAGGACCAGGCGTAAGGCCGGCTGGGCTGAGACCTACTAGGCTGCC Variant GeneID:504807|COMMD5:NM_001014850:35_cdna 84^308 1 EMBV3_09475 GeneID:504807 14 GENE COMMD5 NULL COMM domain containing 5 EMBV3_31414 CCAGGACATGGTAGCTGCCCTGCTGGAATGCGGGGCAGACGTGAACGTGCAAGATGCAGA Gene GeneID:509964|KANK3:NM_001113763:48_cdna Constitutive 0 NULL GeneID:509964 7 GENE KANK3 ANKRD47 KN motif and ankyrin repeat domains 3 EMBV3_14437 TTGTTCAACAGGAGCTTCAGTCAAAAAGGGCTCGGAGCTCAGGGATTATGTCTCAGGTGG Gene AF135451 NULL 0 NULL NULL NULL GENE KDM5D SMCY Bos taurus SMCY (SMCY) gene, exon 27 and partial cds EMBV3_08762 AAATTAAATCCAGAGTTTTACCATGAGACCCTGGTGAGGCTGGGAGCACAGTTCTCTAGG Gene BVT0101_074288 + 1 EMBV3_31880 GK000005.2:57454986-57455440 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192085 TCONS_00192080 TCONS_00192079 TCONS_00192087 TCONS_00192081 TCONS_00192086 TCONS_00192084 TCONS_00192082 1 XLOC_117087 Coding TCONS_00192082 XLOC_117087 Coding Coding RNF41 5:57428210-57459140 j TSS143817 6093 3 TCONS_00192082_3 176 0.201870999507632 6 0.803194413010443 9.56867303715809e-14 0.000365402460248868 2.93438545118342e-06 5.95818681172953e-11 0.00110972412862883 5.00255875632546e-15 0.000317173149806033 0.000787805115504345 2.532415574358e-08 4.03660901338524e-08 2.57171196073365e-12 6.75909070687736e-11 1.58337476036414e-13 3.50361745974907e-05 0.000174993241349209 7.92793910579211e-07 0.00102957510573797 0.001792361639381 0.000428600673465132 0.00129339749146832 0.000476235204341574 0.000375450572217369 0.000547944899457708 0.0017926630408475 0.000824973977617647 0.000642664100684 0.000384509593199696 1.49260272899709e-16 0.000268107410182693 0.000291656065598836 NM_001046525.1 RNF41 Bos taurus ring finger protein 41 (RNF41), mRNA. 0.0 2607 99.86 0.237978007549647 NM_005785.3 RNF41 Homo sapiens ring finger protein 41 (RNF41), transcript variant 1, 0.0 2214 77.26 0.460364352535697 TCONS_00192082_3 sp|Q8BH75|RNF41_MOUSE RNF41_MOUSE E3 ubiquitin-protein ligase NRDP1; 1e-102 302 78.69 0.982954545454545 9 coding 1 1 1 1 0.0418316949986272 0.712464683636738 0.00966840386279144 0.845798568926498 TATCTCTCGGCCGCTGCGGGTACAGAGAGTCCAGACCGCTTCCAGGGCGGACCTGGGTTTCAGTGATGAGACATGGGGTATGATGTAACCCGTTTCCAGGGGGATGTTGACGAAGACCTTATCTGTCCTATTTGCAGTGGAGTCTTGGAGGAGCCAGTCCAGGCGCCTCACTGTGAGCATGCTTTCTGCAATGCCTGCATCACCCAGTGGTTCTCTCAGCAGCAGACGTGTCCGGTGGACCGGAGCGTTGTGACGGTCGCCCACCTGCGCCCAGTACCTCGGATCATGCGGAACATGCTGTCAAAGCTGCAGATTGCCTGCGACAACGCTGTGTTTGGCTGCAGTGCTATCGTCCGGCTTGACAACCTCATGTCTCACCTCAGTGACTGTGAGCACAACCCCAAACGGCCTGTGACCTGTGAACAGGGCTGCGGCCTGGAGATGCCCAAAGATGAGCTGCCAAACCACAACTGTATTAAGCACCTGCGCTCAGTGGACAGAAGCGAGACATTCAGCTGCTCAAGGCATACATGCGTGCAATTCGCAGTGTCAATCCCAACCTTCAGAACCTGGAAGAGACCATTGAGTACAATGAGATTCTAGAGTGGGTGAACTCCCTGCAGCCTGCACGAGTGACCCGCTGGGGCGGCATGATCTCCACCCCTGACGCTGTGCTCCAGGCTGTCATCAAGCGCTCCCTGGTGGAGAGTGGCTGTCCTGCCTCTATTGTCAATGAGCTGATCGAAAACGCCCACGAGCGGAGCTGGCCCCAGGGTCTGGCCACGTTAGAGACAAGACAGATGAACCGGCGTTACTATGAGAACTACGTGGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTTGTGATGGCCTGTGAGAACCAGCACATGGGTGACGACATGGTGCAGGAACCTGGGCTCGTCATGATCTTTGCGCATGGCGTGGAAGAGATATAGGAGATCTTGATGGGCTCTCTGGAAGAGATGAAGATCTGAAGATCCAGTTACTCCAGCAGCAGGGCCCCAAGTCCTCCCCACTTTTCTTAATACCGTGGCTTACCCTGGAGCCACACGTGTCCCAGCTGTGCCACCACTGAGGGGGACCACAGAGCACTCTGCTCAGCCTTTTAGGTGGGAAACCCAGATTCCCTCCTTTTGTCTAATTTTTTCCCCCAAGATGTCTGTAAATTTTCCACCTGATTGGGAAAGTCCCCATCTCTATTTCTGTTTTCCTGCCTAGGGTCCCTGGTTCCAGATATTTTCAGAAAGCACAAAGATACTCATTTTAGATAGAGGATCAGGATGGAGTGAGGAATCTCTAACTGTTCCCCTCCTCCAAAACCTGGGACTCCAGATGAGGCAGGTCTGTTGACTCTGAACAGCATTTAGAGGGCAGCTGTGGGGAGCAGACATCCTGAAGAAATGGTAGAGTGGAACAAAAGCCTAGAAATAAATAATGAGGCCAGTAGGCCATCGCTGGTGGCCCTTAAGGGAAGACTGGACCTCGGTGCCAAGCAATACCCACCAGGCCACTTAAAGGTGTGGGCTCCTGCCGGGCCTGCGGGTGTACAGTTGGGGATGCCGAATACTTTCAGATGAGCTCTCCTTTCCTACACTTTATCATGGCTAGGCAATGACAGGGTTGGGGGTGAGGGGTTAGTCTCCTGGGGTGAATGCTCAGCAAGAAGCAGGTTGCTGGCTTCTGCTGCAGTCGGGTGGGTGCTGCCTTTGTGGCACGGGCCATAATAGCCCCCTAGACCCCTCGCCAGCCCTGTGATTGTAACTAGTTATTTTGGTAACTTTCTTTCACTCTTTCCCTCCCACTTTTTTTTTTTTTTTTAAAGAAAGGCCTGATTATGGCTACCCCACTTTTCTAGCCCAGCCACGTTGTTGGCAATTTAATTTATTTACCTTTTTTTTTTTTTTAAGAAAGGAAAAAGAAAAAAAAAGTTAACAAAACAGAAAACTTTTCTTTTGCTGTTCCTGTTGTGGGGATTTTTGGATAGGGTGGGACAGGGCTGGGGTCTTTTATATTTTTCCTTTTCAGCACAACCTTTGGCTTTAATATAGGAAGGGCCATGGGAGCCCCTGGCTGAACTGAAGCCTACCCCAAGCCTCCATAACCCGTCTAGGATGAGGCGCTTCCTCTATTCCAGTGATGGATGTGACCGTCCAGCATCACTGACTATGCCCTAGAGAACTGTGCTCCCAGCCTCACCAGGGTCTCATGGTAAAACTCTGGATTTAATTTTGAAGAAATCCTACCCGCCACCAGCCCTACCCTAACACCCAGTTTCCTTGGAGATATATAGCTGGGTTCTAAGCTTCACCAGGCAAGACGGGATGGAAATCCTGTCACTGAGTACAGGCTGTGTTGTCTCACCCATACCCGCCATGGGCTTCAGCTCCATTTCAAGCTGCCCAGGGCATTCCTTCATCCCTGGGGTGGCCAGCAGAGTAAGAGAAGGGGAGGGGTAGTGGGTGTGATTATCTTAATATGCAGGTGAGAGAGGGGCTAGAGGAAGATGGCCATAGGACAGCTTGGAGTTTTATCCCAGGCCAGCTTGCTGTGGGTCTGGTAGTTGGGTCATGGCTCCACTGGGACTGTGGGGAGGAGAGGGACACAGCTTGAAGGCGGTGAGGAACAGTCATATGTTCCAGCTCCGGGACGTTGTGCTCAGGAATTTGAAAACGCTGCTATACTTAGTCTGGTTACTACATTTCTTCCACTCCCCTCTGCCCCTGCCTGCCTTACCCAGGCCCACACCCTCCTGTTATCACCTTCAGATGGAGCCAGGAAGCTCAGTCAAGGCTTCCCTACCCTTTGCACTAGTGTCTCTGCAGGTCGCTGGTTGTGTTATACATGTGCTGTTTCATGGTATTGACTGCACTAATAATAAATCTTTTACTCAGCTCTCTCAATTCTTAATTCATATCACTCCCCTCCTGGAGGTTCTCCTCTGCTTTGGCCTTTCTCTACCTTAATTCCCTGACTTCTTCCTTGCTCTGTAACCAACTCTTGTCTTTGGGCTGACCTCTGTTTTAGGAGGTCTGTGTGGAAGGAGTGTACCCTCCTACGCCCTTCCCTCCTGTCTCCTGTTCTGTAGAGCTGAAGCGCTCTTGCTAGTGATCTGGACTGTGTTATTTTCAGAGTTTTCCTTTGCTGCAAATCCATGTCTTCCCAAGGTGCTCTGGGATTTGGGGACACTTTCTGTAGACCATATGCAAATACCTTTCCCCTTGTCCCACAAACACCTTTGCTTTGGAATCTGGGATTCCATGGCAGGCAGAGAAACCTCCACCTAACCAAAAAAGTAAACATGAGGAAAGGAACCTGGAACGACTGCCTGCTGTGATTGTCAAACCCGATAAACCCTTCTGTAGGCGTTTACTGCCACTTTCCCTATCATGAGAAAAAAAATCTTTTACCACAGTACTGTATTTTAAATTTGTTGAGCATTTACTGTGCACCTAATATAAATCTAATAGTACTCTAGACACTTTAGAGGGGCAAAAAAAAGCATAAGAACACTCCTGTGCACATGGAATCTACTACACTTTCATATACACAAGATCTGATTAGAAGATGCTGATAAACACATCATGGTATAGACCAAGAGTGGCAACATATATGCTCTAGTGACAGCAGTGCTTTTTTTAAGTTTCTTTAAAATAATGTTTGGAGAAGGCAATGGCACCCGAAAATTATGTTTAGAACCTGCTGCTCATTCTTTTGAATGTTATGAATGATGCCAAATCTTTTAGGGTAGGCCTGGTTTTTGGAAACAATACTCACTGAATGTCTATTTTGCAAGAACTCAACTAGGGTGGGGCTGGGGCTGGTGGTTCATATAGCAAAATGGCACCTACCTTCACAGAAGTTACTCCCCGATGGAGATAAATGTTCAATCAGTTCAGTTCAGTTGCTCAGTCATGTCCAACTCTGCAACCCCATGGACTGCAGCATGCCAGGCTTCCCCATCCATCACCAACTCCTGGAGCTTGTTCAAATTCATGTCCATCGAGTTGGTGGTGCCATCCAACCATCTCATCTTCTGTCGTCCTCTACTCCTCCTGCCTTCAATCTTTCCCAGCATCAGAGTATATAATAAGACATCATAAATGTGGGAAGTGGATCTTGCCACAAGCAGTATGTGAGCAGAGTGAAGATAAAGCCCTGGGTTCCAGGAAAGACTTTTCCGGGAGACATGGTATCTTGTTCTACATCAGAGGTTAGGACGTGGTATATTGTTCTAGATCAGAGGTTGGCAAACTACAACTTGTATCTTGCTGCCTGATTTTGGAAAAAAAAGTTGTACTGGAACACAGCCATGCCCATTTGTATTTATGTATATTGTCTCTGGCTGCTTTCAGATTACAGCAGTAGAGCTGAGTACCTGCCATAGAACTATGGCAAAACCTAAAATGTGTGCTACTTTGTCCTTTATAGAAAATGTGCCAACCTATTTTAAGGTCAGGAGAACGGGCAGGGAAGTAAAGAGCGTTGCTTGTTTTAATTTTTTGTTTTTGTTTTGTTTTTTTTTAGTATATGCCTTTGAAAAATCAGAATTTTTCTGCATTGTCAAAATAACAAATGCTTAAAATTAACAATGTATCCTTAATCTAATACAAACTTATATTCGCAGTTCCCCAATTGTCCTAAGAAAAATACTTTTAGAGCTGATTACTCTCCAACCTGGATCCAATCCAGGAACCATGTGGTTATACCAGGTTATGTGTTTTAACTCTGTCTGGATTCCTTAAACAACCTCTTTTTGGTAACATTAATTTGTTGAAGAGAATAGGGTCAGTTGTCCAGAGAGTGGTCTTTTGAATTTGACTCCTTCTTGACAATGTCCTTTAACTTATTCTTCAAACCGCTATTTTTCCTAAACAAGATTAGATCTAGAGTCAGAGAGATTCTTTTTTTTTTTTTTTTGTCATGCCATGTGGCTTGTGGGATCTTAGTTCCCCAACCTGAGATTGAACCCAGGCCCTCAGCTGTGAAAGTGTGGAGTCAGAGCCCTACCAGGGAATTCCCTGGAGTCAGACAGAGGGAAGTTAACCAGTTCTGGGAATAAAAGACATCTCAGGGGAGATGTTCTTTATGTTGTGTAACATTAGAACATAGGCCCAGTTGTCCCACTATTACCCTGATCTCTTCACTGTACACTTTCATCATTGAGAGGTTTTTGAAGCTGGCTAGGTGACAAATATGTGCCCTGAGAGAAGGGGCAGCTGGCAGTACAGATCTGATTGGTTACTGCTATACAAGAATAGAGACCCAACACTGCTCCTGACTTTTTTCAAAAACTTGTGGACATCCTAATGTTTATGCTAAATATCACAACTTTTAAATGTTGGCTCAATTTTTAAAATGTGGGCCAAAAAAAACATGGTTCACCAGTTTTCAACCTCTGTTTTAGGCTGAAATAATAGCATGAATAAAAACAATTGGAAGTGAAGGATATATTGAAGAAGGAGGAACGTGATCTGAAGCATAGAGTTTGTTGAAAGAAGTAATGGAAGACTAAAAATAATTTGGGGCTGATTCCTGGAAAGCATTGATATGGCAGGGAATTTGGACATTAGTTTTACAGATAAGTTCTTGAGAAGAGACGTGACTTGTAATTCATGGTTCTAGTGATGATAGAAAAACAATGAAAATTGGATGATAACATTAGTAAGCTTTGCACTAATTCACATGAGAGGATTAGAGCTTGAAATGACCAGGAAAGAGGACAGAGGAGGGGAGAAAAATCAACAGGTTAACTGACCTTGGTAACTGACTGGATTCACTCAGCCAAAATTTATAGCATAAGTATCAAGTGCTAGACTGGGTTCTGGGCATTTGAGATATACAAATAATTGTATATTCCTTGAAAGGAATTTGAAGCTTGGGTGACATACACTTGAACAAATAATGGGAAATACAGAATAGCATACTGCTAATATGTATGTTTAATGCAGTGGGACAATGAGGAGGAAAGGGGTCAACTCCCTACCCTACCCTGGTGGGATGCAGGAGGGAAGTCTTTCCAGGAATCACTAGAGCTGAGTTCCAAATAGGATCAGATATTGGCAGTGAGGAAAG EMBV3_09071 GAGGTGAGTCGTCTCCTGGTTCCGGGGTGTATTTGTTGTGTGTCAGTTGTTCTCCGGTCT Gene GeneID:518874|SEPSECS:XM_002688175:105_cdna Constitutive 1 NULL GeneID:518874 6 GENE SEPSECS NULL Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase EMBV3_34442 CCAAGCCGGCCCCGACCTTGCCGGAGCAAGATGCGCTCCCCTCGTCGGAGGACGATGATG Variant GeneID:281768|FGFR1:NM_001110207:26_cdna 189^455 1 EMBV3_08768 GeneID:281768 27 GENE FGFR1 MGC151817 fibroblast growth factor receptor 1 EMBV3_36256 CTCCCTTTAGTATCAAAAGCAGACACCTGAAGCTTCTTTGCACTCTGTGTTGCAGTGCTA Gene GeneID:506569|TTC3:NM_001109767:12_cdna Constitutive 2 NULL GeneID:506569 1 GENE TTC3 NULL tetratricopeptide repeat domain 3 EMBV3_34121 GGGATACTGGCTCTTTTGATTTGTATTCCTTTCCAAGTTGCCACACAGAATGTACAGGCA Gene GeneID:535744|CPNE8:NM_001098085:10_cdna UTR3_Alt 2 NULL GeneID:535744 5 GENE CPNE8 NULL copine VIII EMBV3_34409 TTCCTGCCGTTCTTAACCTGCTGGTGTTTGTTCTCTCATGTCTGCAGCCGTTTTGCAGCA Gene GeneID:788091|MAPKAPK2:XM_002693890:203_cdna Constitutive 0 NULL GeneID:788091 16 GENE MAPKAPK2 NULL mitogen-activated protein kinase-activated protein kinase 2 EMBV3_05713 CCGCGTCCGCCTAAAGGCGCACTATAGCGGAATCCATCTACCGCCGTGGAGCCAGAAGAT Variant GeneID:286877|PRKCZ:NM_001077833:31_cdna 189^451 1 EMBV3_41095 GeneID:286877 16 GENE PRKCZ NULL protein kinase C, zeta EMBV3_17207 GAGGCTCCTCATTTCAGGATATTCAGAGGATGCCATCACGAGGATCCATGGTGTTCCAGC Gene GeneID:100337100|LOC100337100:XM_002698477:527_cdna Constitutive 0 NULL GeneID:100337100 26 GENE LOC100337100 NULL leucine-rich glioma-inactivated protein 1-like EMBV3_28467 CGACACAGTCACATTCTCGACCACATCTGTGTCTGACTGCAAGACTAGATACTTCCCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23112 GCCCCTGCTCAACAAAACAGCTATGACTGTGGGATGTATGTGATCTGTAACACTGAGGCC Gene GeneID:782385|LOC782385:XM_002692707:121_cdna Constitutive 0 NULL GeneID:782385 14 GENE LOC782385 NULL similar to SUMO/sentrin specific peptidase family member 8 EMBV3_06683 GTGTTTTTGCAGCATTTGGACAAGTCTAGAATTGCTTCCCCAGAGAAGGCAACGGCACCC Gene BVV0102_366320 - 1 EMBV3_14219 GK000010.2:59971151-59984276 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080561 1 XLOC_049445 NonCoding TCONS_00080561 XLOC_049445 NonCoding NonCoding - 17:50384106-50385700 - TSS60501 1594 1 TCONS_00080561_2 76 0.238393977415307 1 0 0 0 0 0 0 0 0 0 0 0.000469785024811134 1.43612520586762e-06 0 1.80005059933777e-06 8.85319111165636e-05 4.61687538463291e-05 0 0 0 0 0 0 0 0 0 0 0 0 2.41033234837088e-05 3.04555161907757e-06 0 NM_001206779.1 IGSF5 Bos taurus immunoglobulin superfamily, member 5 (IGSF5), transcript 9e-23 113 73.93 0.127352572145546 0 noncoding GGGGGCAATAGACCCATAGAACAAATGTCATAGTCAGCAGTCTGTCTTTGAGCTAAATGACACCTGCAGGGTTCTCTGAGTCCCGAGGACAAGGAGAAGCAAACATAGGGCATCTAATGTTGAGAGAACTGAAGGCCACGTGAAATTCGACAGGCAAAGTTAATGGTTTATGTCATCTGACTTTGTGAACACATGTGAGATGATCTGCAAATATTATCTAGCTAAAGCTGTCTTTGAATAACGCTTTCCTCCAAGATCTTGCCACTGTATTACTCTAGAGCAATAGCAGCAGCAAGAGACGCTTCAGAGGAAAGCCTCTTTCATCTGGGGGTCTCATGAGAAATATCCATTGCTTTCTTTTCCATTTAGAAGAGAAGCAAGAATTTAATAGGTGTGATTCCTTTTGCAGTCTTCCATTGTATTGACCTTCCTCAACTAAGGGACACCTGGTCTTACATTATAATCCCTCCTTATGAGCCTGCTCTCAGCATGAGAAATGTAGAGCTATGCAGAAAAGCTCGTGAATCAGATGTTGTTTCTCACACATATGCCAAAAATGCATAGATCTATATGAAGCTATGCAAACTACATAAAAACCCTTTACTAATCAGTTTTCTTGAGAATGAGATATTTCACATCTTTACAGAGTTTTCAAAGTGAATGCTTAGAGTTTGACACTTAGGGAGAACCTACATCTTTTTTTTTGTTTTGCCTTGTATTCAAGTAAACCCTGTAGTAAGAGTAGGGGTAATAATTGCTACCCTATATGGAGTGCTTATTATGAATTGGGCATGATTCCTAGAACTTAAGATATACTGTGAAGGAAAAATGTTGCCAGTCACATCAGTAAACGGAGGCCACTGCAGCCATCAAGCCACTATTGTAAACCCAGATGGTGCACACTTAGGGAATTTAGGATGGAGACAAACGAGTGGCCAGCTGCTAAGCCCTCAGCCACTGCAGCCACCCCCAAAAGTGATTCTGAGGGGATTCAGGATGGAGAGAAGCAGGATACTTCCTAGATGGTTAAGGTTCATAACAAGGGAACGATCTCAATAGCCCAGTCTTATATCTTCCCATCGATAGAAAAGTGCTATATCTATTAACTTGAGATATCTGCTTTTCTTTAATAAACAGTAATCTTTTGACGGGCTTCCCCAGTGAATAACAGGTTTTTCTAATAGCTGTTTTTCTAATGGCTATCTTATGAGGTTTGCTTCATACACAGAAGCTCAACGGTACTAGACAAGAAAGCAAAGATGAATACTTTTAACTAAAGGTATCTCTTCCTCAGTCTTATCAAAGTACCAGAGAATGTTTTGGCAGTAGATGCCTCAAAACTTTCTTAGACCAGCCTCTGCACACCACCTGTAAGCACCAAACCAACACTTTGTGGCCAGTTTTAAAACTCGTGGAAGAGACTTTTGCCCTGAGAGGGGGTCTGAAAGTTATTAAAGGATTTACTATGTAAAAGTACAGAATGGAGGAATTGAGGTATTTTTGCAGCATTTGGACAAGTCTAGAATTGCTTCTCTGGAGAAGGCAACGGCACCCCACTCCAGTACTCTTGCCTGGAATATCCCATGGACGGAGG TCONS_00077229 . 3' 507863 TCONS_00077229 . 3' 509456 EMBV3_34772 CCAATGCTGGTAGGAAATCGAAATCTGGGAACTATCTCCCTAAACAGGCACCAGGCTACC Gene BVT0102_351490 + 0 NULL GK000010.2:45952114-45992821 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093071 TCONS_00246277 TCONS_00246278 TCONS_00210440 TCONS_00099407 TCONS_00246279 TCONS_00045930 5 XLOC_057069 XLOC_150950 XLOC_128950 XLOC_059650 XLOC_026577 Coding TCONS_00093071 XLOC_057069 NonCoding Coding - 19:27853373-27854446 - TSS69910 1073 3 TCONS_00093071_1 78 0.333643988816403 1 0 0 0 2.53941740141188e-06 0 9.20257554964073e-07 4.16711652527927e-07 1.63048385329419e-06 1.71493719398059e-06 6.127779082253e-07 1.91728175988698e-06 3.46684581540479e-05 0 0 0 0 0.00239254907361366 0 0.00096263667469414 0 0 0 0.000295305017134913 0.000314920783468068 0.000987572094140501 4.51997508299272e-06 5.47178087542981e-07 0 3.13310092736522e-05 0.000169604523826093 0.000248372966383186 XR_229807.1 LOC101907467 PREDICTED: Bos taurus uncharacterized LOC101907467 (LOC101907467), 0.0 1252 92.49 0.801491146318733 XM_005248444.1 TMEM161B PREDICTED: Homo sapiens transmembrane protein 161B (TMEM161B), 3e-07 60.8 69.15 0.181733457595527 0 noncoding CTCTCAAGCCTTGATGATGGATTTCTCTGCTATCTTCTAAATAAAATAGAGCTGTAACACTGATTTGTCTAAGAGTTATAATACGGTCTGTCCAAGACCGGAGAGCTGTGACACACCGAGGGGGCTTTAATATCCGGGGACTTTAATATCCGTCACTCTAAATCTTTGTTGTGACGAGACAAAAACCGAGGAGCATGCACTCACCTGACAGAAAGATCCAGTCGGGGGCACCAACAACAGCTCATCTGGACTCCCCACAAGGGTTTAAAAATTCCCCAGACATTCTGGGGGAAGCCTTGGCTTCTGACCTGAACTCATCCATCTGGAAGAGTATGGATGTTGGCTCCTACAATACGGGGATGACCTGCTGCTGGCTGCCGAGACCAAGGAAAAATGTTGGGAAGGGAAAAAAGCACTGCTCCAGCTGCTGATGGAAGCAGGTTACCAGGTGTCGAAGAAGAAGGCACAGATCTGCAAGGAGGAGGTAAGGTCTCTGAGGTTTGTTTGAAAGAAGGACACAAGGTTCCAGACCCTAGTTTGGTCCTGTATACTGATGGCACTAGCCTCATAAAACAAGGACAACGGCTGTCAGGTTAGCCAAAGTGGAAGGGGCCATCAAGACTGAAAAGGGATGGTGGGAATTGCCAAGTGGCAAATTATTGGTACTGGAGGAGCTGGCACACACTCTGGTAAGCCAAACACACCACGCGACCCACCTAGGCCATGCTGCCTGCCCACAGGTTAATGCTGCCTCTTGGTGTTCAGACAAAAACCTCCGGGTATTCAGCTGAAAGGCACGCTGCCCTTTGAACACCTGGGAGTGGACTTCACTGAAATGAAACCTCATCGACACTACCATTACCTGCTGGTCATGGTATGTACGTTTTCGGGATGGGTAGAAGCTTTCCTACCTGGACTGAAAGAACATCAGAAGTAGCCCGGTGCCTGCTTAGGGAAATAGTTCCCAGATTTGGATTTCCTACCAGCATTGGATCAGACAATGGCCCGGCTTTTGTAGCTGATTTAGGACAACAAGTAAACAAAACTATAAACATCAAATGGAAACTGCACAC TCONS_00093073 s 5' 6514 TCONS_00093073 s 5' 7586 EMBV3_22931 GGCTGCGCATCTTCCACACTCAGGAGACAGGATAGAGATTCCTTCTGCCATCAGATGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04379 CACCACCAAGTGCATGCTCTGGCTGAAGGCCTTGCCGCAGTCCCCGCACGCGAACGGCTT Gene GeneID:100337414|LOC100337414:XM_002695528:376_cdna Constitutive 0 NULL GeneID:100337414 18 GENE LOC100337414 NULL hypothetical protein LOC100337414 EMBV3_15877 TATATCATCCATGCTGTTCTGAGAGTCCCTTCTGGGAGAGGCAGGTACAAGGTCTTCTCC Gene GeneID:786596|LOC786596:XM_002691592:142_cdna Constitutive 0 NULL GeneID:786596 11 GENE LOC786596 NULL similar to olfactory receptor 366 EMBV3_29986 TTAAGCCTTGTTTTACGAAGTAGGGGGAACGGAGGCTCAGAACCGTGAAAGCACTGACCC Gene BVT0102_107702 - 1 EMBV3_03182 GK000017.2:62365248-62526416 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081269 1 XLOC_050149 NonCoding TCONS_00081269 XLOC_050149 NonCoding NonCoding - 17:62368134-62369022 - TSS61209 888 2 TCONS_00081269_3 109 1 0 7.66086344493827e-05 0 0 0 5.55988194662257e-06 6.44514761793366e-05 0.000157614005587016 0 4.44263506571782e-05 0 0 0 0 0 0 0 0 0 0.000104979847704459 4.8590769867383e-05 3.41861054284637e-06 0 0 0 2.34070709732751e-05 0 0 0 0 0 0 noncoding 0 0 0 0 0.063298889228798 0.636460398768342 -0.0089900039837327 0.874545543257577 CCTTCCTCCCGGGTCCCACCAAGCTCGAGGGAGCCGCGTGTGCGCTCACGGGCGTGCGTGTGCTAGTGTGTGTGTCTGTGTGTAGAGCCTCCCTCTGAATCTGAGCTGTCCTAGAACCCACCCTTCTTTTGTGGGGCAAGTTCCCGGCGGGTAGGCCCTTCCAAAAATTCCATCCAAGAAGGAAAACCCTGGTGCTGACCTTTCCCATAAGCCAGCAGACAGGCAGCCGCCTTTGGGCTCTGCGAGAAGCTTGAAACGCTTCGCGTCCGTGCGCTTTTCTGCCTCGCTGGTTTCCAATTTTGACCTCACGGCAGCCAGCCAAAAGAGTGGCTGTTGGGGTGCAGATGCCAGGCCTCGATCGCGACCTGGCTCTTAGATACAGAACTCTAGAAAGTTCGTACCTATGGGTAATTCTTTGGGCATTCTGGAGCCAGGAGCTACAGGTGTTAGAAGTAGATGCGTGTGCGTCCGCGTGGACTTGTACGTGCCCTACCAGGAGACGTCTCTTCCAATTTGTATTTCGAAGTTGCTGCGCAAGACAGTTCCGGATGTAGATGCCTCTGGTTGTTTTATAATCAAGATGCGTATAATCAAGATGTATATGTTGCAGATGTCGGCGTTCAAAGTACACGAAACAACAATAATAAAATGAGCTGGCAGACCGGGGCACGTGCAAGAGACAGGCACTGGGTTCAGCGCCCCACAAAAGAGATCGCCTTTAACGCCGCCTCACAATTAACCCTATGGTGTGCGCGGACGACCTTTAAGCCTTGTTTTACGAAGTAGGGGGAACGGAGGCTCAGAACCGTGAAAGCACTGACCCGGGAGCGCCCGGGGAAACTGGGAGCCGGCATTTGAGACCAAGTGGGCCCCGGAATCCACTTGAAC TCONS_00075790 TCONS_00075795 TCONS_00075791 TCONS_00075792 . 3' 2823 TCONS_00075790 TCONS_00075795 TCONS_00075791 TCONS_00075792 . 3' 3710 EMBV3_31303 CTGGTTCAAGCGGTGGCGGGAGCCCGTCAGGTTGGCAAATAAACAGGATAAGGAAGGGGC Variant GeneID:512781|ARL13B:XM_002684668:14_cdna 337^657 3 EMBV3_15668 GeneID:512781 1 GENE ARL13B NULL ADP-ribosylation factor-like 13B EMBV3_20579 GAGGACACCATCTCCATCAACCACAACTGGGTCAACGGCTGTAACCTGGCCAATATGTGG Gene GeneID:506151|JMJD4:XM_002688513:47_cdna Constitutive 1 NULL GeneID:506151 7 GENE JMJD4 NULL jumonji domain containing 4 EMBV3_14915 TGTCCTCTGTGTTTGTCTCCTGCTCCTGGCCTTGTGTGGCCTAAGTATTTTGCGACCTTG Gene GeneID:281235|IDH1:NM_181012:2_cdna Constitutive 0 NULL GeneID:281235 2 GENE IDH1 NULL isocitrate dehydrogenase 1 (NADP+), soluble EMBV3_25866 CGTCCATGATAACTGAGACTGGTCAGCCTAGAACCTTTGTATTTTGCCCCTTCTTGCGGG Gene GeneID:504377|DCLRE1A:XM_002698510:93_cdna Constitutive 0 NULL GeneID:504377 26 GENE DCLRE1A NULL DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) EMBV3_14706 TCGCGTCAACAGCCACTTGCCTTTAGCATCCCACCCAAACTTCATTCCCGACAGGTTAAC Gene BVT0102_144034 - 0 NULL GJ060126.1:1-7561 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21466 ACAGGACCCTGGGGCTGAGCCCAGAATACAGCAACAGTGGGGAACTGGAAAGGGTCAGCA Gene GeneID:535158|GRIN2C:XM_002696188:190_cdna Constitutive 0 NULL GeneID:535158 19 GENE GRIN2C NULL glutamate receptor, ionotropic, N-methyl D-aspartate 2C EMBV3_09959 AGTACTGAAACTGCAGATGGGGCTCCAACCACGTCCTGTCTTGGCGCTGAGGAAACTTTT Gene GeneID:100296752|LOC100296752:XM_002690588:38_cdna Constitutive 0 NULL GeneID:100296752 10 GENE LOC100296752 NULL hypothetical protein LOC100296752 EMBV3_23503 ACCTGTGGGACACGGTAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACC Gene BVV0102_389890 + 1 EMBV3_32456 GK000018.2:48347628-48398053 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177279 TCONS_00010367 TCONS_00240474 TCONS_00031179 TCONS_00157937 TCONS_00019989 TCONS_00022064 TCONS_00160964 TCONS_00124121 TCONS_00135549 TCONS_00250932 TCONS_00162457 TCONS_00249014 TCONS_00166787 TCONS_00199804 TCONS_00206484 TCONS_00238440 TCONS_00156739 TCONS_00152752 TCONS_00148277 TCONS_00023334 TCONS_00251704 TCONS_00006469 TCONS_00007362 TCONS_00152648 TCONS_00063138 TCONS_00209596 TCONS_00207067 TCONS_00111547 TCONS_00254568 TCONS_00031897 TCONS_00065822 TCONS_00252355 TCONS_00088291 TCONS_00233373 TCONS_00160971 TCONS_00071184 TCONS_00023027 TCONS_00241273 TCONS_00123172 TCONS_00220656 TCONS_00253241 TCONS_00123617 TCONS_00251853 TCONS_00231277 TCONS_00165811 TCONS_00070956 TCONS_00206863 TCONS_00087858 TCONS_00210178 TCONS_00017462 TCONS_00198662 TCONS_00055859 TCONS_00056147 TCONS_00189807 TCONS_00240690 TCONS_00190575 TCONS_00186814 TCONS_00251004 TCONS_00249913 TCONS_00250196 TCONS_00197973 TCONS_00032586 64 XLOC_131641 XLOC_107053 XLOC_005918 XLOC_147138 XLOC_017428 XLOC_096391 XLOC_010667 XLOC_012735 XLOC_097857 XLOC_075673 XLOC_081772 XLOC_153875 XLOC_099338 XLOC_151957 XLOC_101623 XLOC_121456 XLOC_125006 XLOC_145107 XLOC_095199 XLOC_092517 XLOC_090159 XLOC_014001 XLOC_154645 XLOC_002032 XLOC_002923 XLOC_092413 XLOC_037865 XLOC_128107 XLOC_125586 XLOC_067447 XLOC_157500 XLOC_018142 XLOC_040541 XLOC_155296 XLOC_053078 XLOC_142855 XLOC_097864 XLOC_042956 XLOC_013697 XLOC_147937 XLOC_074726 XLOC_133973 XLOC_156182 XLOC_075169 XLOC_154794 XLOC_140766 XLOC_100651 XLOC_042733 XLOC_125383 XLOC_052647 XLOC_128688 XLOC_009039 XLOC_120316 XLOC_033667 XLOC_033950 XLOC_115844 XLOC_147354 XLOC_116610 XLOC_112865 XLOC_153947 XLOC_152856 XLOC_153139 XLOC_119632 XLOC_018826 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_40336 TCACGTTTCTGGGCCTTTCTGCAGTCAACTTCCTCACCCTGTGGGACAGGCAAGAAGGAA Gene GeneID:516326|LMNB2:XM_002688951:81_cdna Constitutive 0 NULL GeneID:516326 7 GENE LMNB2 NULL lamin B2 EMBV3_18972 CTTAACAGATGCTACGTGCTTTGTCTATTAGGAACATGCTAAGCCTTCCTGGGCTGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32838 CGGAGGAGTCTAGGCATGCGAGAGAAGAAGATGAAATTTTGGCAAGAATATTCAGTTAGA Variant GeneID:616767|PRRG4:XM_002693495:143_cdna 107^270 1 EMBV3_03662 GeneID:616767 15 GENE PRRG4 NULL proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) EMBV3_38480 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21741 GCCCCTTCCTGCAGAAGCAACTCACTCAACCAGATCTCCGCGAGGAGCCGGTGCCCAGCA Variant GeneID:514706|DBNL:NM_001098970:38_cdna 924^974 2 EMBV3_13083 GeneID:514706 22 GENE DBNL MGC166201 drebrin-like EMBV3_09453 TGTTTTTGGAGCCCATTACCTGTGCCGGAATCACTTCTCTGACTTCCATGTCCTGCCATG Gene GeneID:615182|DTD1:NM_001098133:35_cdna Constitutive 0 NULL GeneID:615182 7 GENE DTD1 DTD1 MGC157190 D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) EMBV3_14268 ATTCCTCAGGGAAGTAATGTATGGTTCGAAAGAGTGGACCCAGAATACAGCGACCCAGGG Gene GeneID:100140907|LOC100140907:XM_002698225:821_cdna Constitutive 0 NULL GeneID:100140907 25 GENE LOC100140907 NULL hypothetical protein LOC100140907 EMBV3_33264 CTGGGATCGTTAGCAGTGTCTCCGAAACTCCAGGTGAGGACGCGTAGATTCTGAGGCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02173 TTCACAGTGACACAGACAGATGGGGAAGTGAGACACAAACCCTCCCGTCCTGCTCACGCT Gene GeneID:616727|LOC616727:XM_002694666:209_cdna Constitutive 0 NULL GeneID:616727 17 GENE LOC616727 NULL similar to immunoglobulin lambda-6a light chain variable region EMBV3_09483 CCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTGCTTACTGAAGCCCCTGGCC Gene BVV0102_078718 + 0 NULL GK000020.2:65943134-66351476 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118459 TCONS_00220566 TCONS_00118040 TCONS_00238581 TCONS_00210913 TCONS_00160959 TCONS_00219592 TCONS_00226167 TCONS_00148960 TCONS_00040258 TCONS_00250203 TCONS_00133817 TCONS_00110425 TCONS_00123823 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00174807 TCONS_00232829 TCONS_00132066 TCONS_00250681 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00038669 TCONS_00207934 TCONS_00170890 TCONS_00174805 TCONS_00171428 TCONS_00206300 TCONS_00207933 TCONS_00174806 TCONS_00188145 TCONS_00048805 TCONS_00118487 TCONS_00165978 TCONS_00125692 TCONS_00230722 TCONS_00002600 TCONS_00218429 TCONS_00242415 TCONS_00000529 37 XLOC_072622 XLOC_133883 XLOC_072206 XLOC_145248 XLOC_129423 XLOC_097852 XLOC_132911 XLOC_137940 XLOC_090838 XLOC_024074 XLOC_153146 XLOC_081223 XLOC_066329 XLOC_075375 XLOC_083377 XLOC_104695 XLOC_142312 XLOC_080699 XLOC_153624 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_022492 XLOC_126448 XLOC_103679 XLOC_103815 XLOC_124877 XLOC_114188 XLOC_028936 XLOC_072644 XLOC_100818 XLOC_077234 XLOC_140212 XLOC_000643 XLOC_131749 XLOC_149079 XLOC_000141 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_21527 TGCTCATGCCTGCTTTGCACCCCCACTGCTTGGGCCACGGTGTCTGCACTGCCTTCCTTT Gene BVT0102_040891 + 0 NULL GK000029.2:42889930-42890798 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165311 TCONS_00165314 TCONS_00163785 TCONS_00165313 TCONS_00165317 TCONS_00165312 TCONS_00165315 TCONS_00165316 2 XLOC_100484 XLOC_100026 Coding TCONS_00165312 XLOC_100484 Coding Coding MACROD1 29:42890129-42893993 j TSS123512 1281 1 TCONS_00165312_2 143 8 0.670463370437484 0.000243384724267616 8.58498287459726e-05 0.00057272566816179 0.000141903114551455 4.33191024558209e-13 5.24995639194653e-05 5.65198150619625e-05 0.000139290119870745 0.000471720321371833 1.82942248728946e-09 8.9859599777398e-23 1.54639830774365e-19 0 7.26866002232172e-08 0 0.00211675647861683 0.00123122736985087 7.60492562115948e-10 0.000281759768686114 0.000707687758979273 0.000585341805273922 0.000209578337975371 2.30009461510282e-18 8.17629196580085e-09 6.91067755517232e-08 0.00204790552062215 0.000474810648398991 0 8.37002539911286e-22 0 NM_001046509.1 MACROD1 Bos taurus MACRO domain containing 1 (MACROD1), mRNA. 0.0 1065 100.00 0.459797033567525 NM_014067.3 MACROD1 Homo sapiens MACRO domain containing 1 (MACROD1), mRNA. 0.0 641 84.64 0.448868071818891 TCONS_00165312_2 sp|Q2KHU5|MACD1_BOVIN MACD1_BOVIN O-acetyl-ADP-ribose deacetylase MACROD1; 6e-102 299 99.30 0.993006993006993 1 noncoding 0 0 0 0 -0.0344601908509704 0.754397620150692 -0.045772208476148 0.387949488609253 CCGCGTCTGTAATGTGTCTTGATGGACGGCTGCATCCACCGGGCCGCCGGACCGCTGCTCACCGACGAGTGCCGGACCCTGCAGAACTGCGAGACTGGCAAGGCCAAGATCACCTGTGGCTATCGGCTGCCGGCCAAGTATGTCATCCACACGGTGGGACCCATCGCCCACGGAGAGCCGAGTGCCAGCCAGGCTGCCGAGCTCCGCAGCTGCTACCTGAGCAGCCTCGACCTGCTGCTGGAGCACCGGCTCCGCTCGGCGGCGTTCCCCTGCATATCCACTGGAGTGTTCGGGTACCCCAATGAGGCGGCGGCCGAGGTAGTGCTGACCGCTTTGCGCGAGTGGCTAGAGCAGCACAAAGACAAGGTGGACCGGCTGATCATCTGCGTGTTCCTGGAGAAGGACGAGAACATCTACCGAGAACGCCTCCCCCACTACTTCCCGGTCGCGTGATGCTGCCCACCCTGACCAGGACTGACTCCCCTGGGCCTGCCGGACCACGCTCCCAGCTCTAAGTCTCCGAAGCCTGCAGTGGGGCCTGGCGGGGCCACCCTATCCTTCCCCTACACCCTCCGCCCCGTCAGGAGCCTAATAAAGACCACTACTGCTGCAGCTCCGACTGTCCCAGCTCTGCTGGGGGTGAGGGAGGGAGCCCAGGTGTGGACAGCTGCTTTGGCATCAAGGGGAGGGCAAGAGCTCTCGGTGAGCCAGGCAAGGGGAGGCACGAGGTTGACAGCAGAGGTGGGCGGCAGCACGTCACATTTATTGAGGGCCTGCCCCCAAGAAGCTCACAGCCTGGGGGCTGAGACCCCACAGGTGCCGGGGAGGGGGCAGGGGTGAGAGACGAGGTGAAGGCAGAAAGGAAGGCAGTGCAGACACTGTGGCCCAAGCAGTGGGGGTGCAAAGCAGGCATGAGCAGGGGGCCGAGGGGAGCAGAGCGGGGAGAACGGCGGCCTGGAGAGCCCCACTCGACCTGAGGCTAGACCTGGGGACAGGGGACCACGCACAGGCTGGGGGACTGCCCCTCCCCCGCCTGGCTGGCACCAGCTGGGGTGCCCTGGGGCACCCCCACGCCTCCCTCTACCCTGAGCCAGGATGCAGCATCATGCGGTCCCTCTCCACCCAGGACTCCACCACGCAGAGCCCTGATAGAGGGCAGGTGGCCGGGGCTCCGGCCAGGACAGCAGGGTGGGGGCAGGGCCCAGGAGGGAGCAGCTAGAAGCTTCGGTGCTCCTGGGTCCCCAGGGAAAGCCCTGGCCAGCTAAACAGGGAAGGCATGGT EMBV3_31595 ATGGTGAACATGCCAGGAGAGCAATGCAAAAGGCTGGAAGACTTGGAAGCACAGTATTTG Variant GeneID:515290|HNRNPM:XM_002688877:104_cdna 552^668 4 EMBV3_33642 GeneID:515290 7 GENE HNRNPM HNRPM heterogeneous nuclear ribonucleoprotein M EMBV3_26349 AGGAAACTCCTCCAGCAGATCCGACTTGCCCAGAAAGAGAAAGCAGCCATGGAAGTGGAA Gene GeneID:784970|LOC784970:XM_002699516:32_cdna Constitutive 0 NULL GeneID:784970 X GENE LOC784970 NULL hypothetical LOC784970 EMBV3_28984 CAGGTGACTTCCCAGCAGCACTGGGCCAACTGATATCTCTCCTTCTGAAACACTGTCACA Gene BVT0102_009181 + 0 NULL GK000009.2:10612761-10634447 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42528 CCTTGGGTCTAGGAACTGTATCATCACTCAGACAGGCAGGTACAAAACAGCTGGAAATCC Gene BVV0102_026456 - 1 EMBV3_29185 GK000024.2:43920135-43927641 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21421 CACAGCTGGAATGTTCATTGACAACAGCAAGCCTGATCTGGAGGTGTGTGCGGCATAGAA Gene GeneID:529416|FLRT3:XM_002692042:5_cdna UTR3_Alt 2 NULL GeneID:529416 13 GENE FLRT3 NULL fibronectin leucine rich transmembrane protein 3 EMBV3_11407 GCAAGAATATGGGAGCAGGTCATCATTTCCTCCTCCAAGGGATCTTCCTGACTCAGAGAT Gene GeneID:100300713|LOC100300713:XM_002688154:29_cdna Constitutive 0 NULL GeneID:100300713 6 GENE LOC100300713 NULL hypothetical protein LOC100300713 EMBV3_18947 GTGCTTGTGCCGATGGCAAGATCCGCATTTACAATTTCCTCAACGGGAACTGTCTGAAGG Gene GeneID:511953|FBXW10:XM_002695856:320_cdna Constitutive 0 NULL GeneID:511953 19 GENE FBXW10 NULL F-box and WD repeat domain containing 10 EMBV3_04198 TCACAAGACCAGCTCTCCCTTTTCTCCACGTGGGTAGGCGTTTGACTTATGAGGCTTGAT Gene GeneID:615893|CYBASC3:NM_001099149:109_cdna Constitutive 2 NULL GeneID:615893 29 GENE CYBASC3 MGC166426 cytochrome b, ascorbate dependent 3 EMBV3_12742 CCATGTCACGGAACGTCTTAGGCACAAGAAGGATCTGATGGAGGTGGATTTACCCCTTGT Gene BVV0102_007701 + 0 NULL GK000017.2:65216029-65220604 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15761 GAGCAGAAAATGCTGCCTTCTAATGGGGCCCTTCAGTTTGGGACTCCAAGATGATTATAC Gene BVV0102_153897 - 1 EMBV3_24242 GK000004.2:72574869-72774521 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182023 TCONS_00182022 1 XLOC_110749 Coding TCONS_00182023 XLOC_110749 NonCoding Coding ADAM22 4:72758806-72765341 j TSS136109 2066 5 TCONS_00182023_5 43 3 0.684266911539639 8.24412758046487e-06 0.00077332970249364 0.000385209827399708 0.000377619462583953 0.000541176743889853 6.92556416163401e-05 0.000114131037554367 0.00044744718248319 6.11045491249032e-05 7.96607604330593e-06 4.20690466930892e-10 4.53984356208813e-06 0.000225148537564005 5.41284654054132e-05 7.53030982308277e-05 0.000111438253230463 0 0 0.000168589785991407 0.000198408358149469 1.02856264001257e-05 0 0.000536179071723525 0 4.35963326350824e-05 0.00026506103929001 5.16976522611307e-05 9.29832039171865e-06 0 1.05775999867288e-05 NM_001191131.1 ADAM22 Bos taurus ADAM metallopeptidase domain 22 (ADAM22), mRNA. 1e-67 262 100.00 0.0696999031945789 XM_005250444.1 ADAM22 PREDICTED: Homo sapiens ADAM metallopeptidase domain 22 (ADAM22), 0.0 1328 86.73 0.535818005808325 0 noncoding 0 0 0 0 -0.12847757271059 0.532873242597454 0.00933680139421758 0.856676460290794 CACCTTGTACCAGGAATTGAGGAGTCATGGATGTGTAGTGGACTTTATCTCCTGCCAAGTCTCCTTCTTCGTCAACTGGGTCTATTGCTTCCAGCAGAAAATACCCTTATCCAATGCCTCCCCTTCCTGATGAGGAGAAGAAAGTGAACCGACAAAGTGCCAGGCTATGGGAGACATCCATTTAAGATCAGCTGTTTACATGTGATACATCGAAACTGTTTACTTCAACTTTTATACAAACCCAGCCTCATGGAATCACTGCAAATCTATCTGCTCTTCAGACAATTCGAAAACATCTCTGAGAAGCCACAGAGGAGAGGAAGCCAAGCTTCACATCTGGATACCATTTTCTTTTTGTCATTGGCTTAGGATTTAACTGAACCATGAAAAGGACTACTGAAATGTTACACTATAACATGGAACAACAAAGGTCCTGGTATGTTAATGGATAATCCGCATGACAGATATATGTAGAACTATCACTAAAATTAACTCACATGACCCAAATGTAGCAAGTTACCAAGGGACTATAGTGGATTCAGAACTTGACATTCTGAAGCACATCCTCATTGTAGAAAGTCAGTAATGCTATGTGCATGAAGCTTCTGTTTCTTGTTTTCGACATTTAAGGAAACAACATCCCTAATAGAAACTAGCATGCAGGGCTAAGGCATATAGGATTTCTTCTGCAGGACTTTAAAGCTTGAGAGGCCGATATCCCATATGCTAACTGTAAACATGTATTTTTCTTTTTTCTTTTTTTACTTTTCATATTTATATCAGCATACAAGGACAATTGTACATATGTAAACATTTTAAAATTAAAAAAAAAAGCAGCTGTTACACACAAGTGTATTTTGCCAAATGCCTAAAAACAATCAGTCACAGTCACGTCATTGTCATCCATCAGCTGTTCTTTAAAGATTATAATCGGACGATGTTGTAAATACCGTGATCAGGGCTGTATGTGTGTCTCCCCTTAATTGATGTTTGTCCAAACCATGTGCTAGCCTTTTAAAGTGTGCACAGTCTGGAGGTAGTTTTATTGAACAAGAAAACAAAATGTCCAACCAAACTTAGGGCCTCCACAGCTTGCTTCCTGCCTCCAGGCGCTCTGCTGCCTGTTGGCTGGCCCCTGGGGATCCTCCAGCAGGTCCATCTTCTTTCTGGGGGCTACAGTGCCTGCCTCAGCAGCTGTTCTTTTTCGGTACCAGAGCACATCTGCTAGTCTCACCCCAGGGGGCCTGTGAGCCCCACAGCAGTGTGTCTTGCTGAGATCAAACAAGTGCACCAAAGACGCAGGAGACCACGGCTGCTGATGCGTTAGTAACTCCCACCTTGCCAATACTCCAGCCCTTTGTGGCCGAAACTTTTGTTCTTCAAAAAAACTTTTTAGCCACCCTTATCTGTGATGTGAATGACTTGTTTTAAAAAAACAACTTTTACACAGTTTATTAAGGGTATTTATCATCAGTGGGATGTGAGTCCCAACAAGTCATTCTGCACTGATTTGTAAATAAGACATGGACGGTTCTACGAGGTGGGCTGGGAAGCCTCAACAGGCCACAGAGGGTTCAAAGAAACCGAAAACCACAAAAGTGAGCAACTGTGAAGTTACCCAAACAGCTGGCACGGGGAAGAATCTGATGTCCTGAACTATTTTTTTTTTAATCCATAGAAAAGTGAGAAATCTATGTTAAATCCCCCTCTTTAAAACCAAAGTTCCATAGCTATCATCATGCGGCTCTATCATTCTTAAAGAAAACTTCTCTCCAGAGGCTAACTTAGTGAGCTCAGAAATGGATGGGATCAATCAAATGCTTCAATGGGAAGAGTACTTCTGAATTTCCTTATTTTCTTTCCTTTTTCTTGAGAGGAATGGAATCTGCAGACAAGATTTCAGAAATATCCTGTAAGTTTGATCTCTCCCAGTAGTGTCCGAGAACAAAACCCATTTCATCTCTTAAGTATAATCATCTTGGAGTCCCAAACTGAAGGGCCCCATTAGAAGGCAGCATTTTCTACTCTATCTGTTTATGTCTTCTATAATGGACCTCTCTTCTGAA EMBV3_19261 CGGGGGCACATCCAGAGAGAAGCTTCGTAAGGAAACAGACCCAGAAAAAGTTGCAGGTAA Gene BVV0102_049116 + 1 EMBV3_17537 GK000007.2:57242535-57253500 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29337 TGCTGTACGTGGATGGAGAAGCGCACTTCTACTGGAGGACCAAGTACGAGGAGGTACGCT Gene GeneID:618262|P2RX6:XM_002694647:154_cdna Constitutive 1 NULL GeneID:618262 17 GENE P2RX6 P2RXL1 purinergic receptor P2X, ligand-gated ion channel, 6 EMBV3_06713 GATCTCTTGGGAGGAGGCCTAGATAGTCTGGTGGGACAGTCCTTCATCCCATCATCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13501 AATGTGCTCACGCCTCCCTAGACTCCTCCATTAACGACAGACTATGTTGCGCTGGCACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05838 AACATTGTTGTGACAGTTTCAGGCGAACAGCGGAGCGACTCAGCCATACACATACACGTG Gene BVV0102_257217 - 1 EMBV3_35964 GK000019.2:56877031-56877688 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094737 TCONS_00094741 TCONS_00094744 TCONS_00094743 TCONS_00094740 TCONS_00094742 TCONS_00094739 1 XLOC_057532 Coding TCONS_00094741 XLOC_057532 Coding Coding GGA3 19:56863206-56877820 j TSS70792 4845 1 TCONS_00094741_1 647 0.0553147574819401 16 0.66954081981797 1.67927365076464e-16 8.40372805190599e-48 1.74337841361493e-28 7.60202527627711e-38 2.39177961911477e-16 2.55377577401003e-13 2.87375257297298e-44 8.25919985927943e-12 0.00010602582651384 1.62251480951122e-27 5.75257788499815e-54 1.38356480389717e-25 1.57673753259897e-08 1.71013628553188e-47 5.66154531785678e-41 0.000375503576880755 6.48952965091423e-23 9.82000947160742e-74 2.04589140577275e-43 0.000398073944976772 2.91995056852254e-158 1.96906323325254e-14 0.000121906120696697 4.46298553216386e-05 2.36114416413948e-43 3.69718605398844e-25 7.3576293067477e-49 0.000599668311160795 4.9535525925654e-93 1.72420144816515e-91 XM_005221179.1 GGA3 PREDICTED: Bos taurus golgi-associated, gamma adaptin ear containing, ARF binding protein 3 (GGA3), transcript variant X1, 0.0 3460 100.00 0.395665634674923 NM_138619.2 GGA3 Homo sapiens golgi-associated, gamma adaptin ear containing, ARF binding protein 3 (GGA3), transcript variant long, mRNA. 0.0 1433 78.96 0.319917440660475 TCONS_00094741_1 sp|Q8BMI3|GGA3_MOUSE GGA3_MOUSE ADP-ribosylation factor-binding protein GGA3; 0.0 827 75.16 0.945904173106646 2 coding 0 0 0 0 -1.7790864103536 0.0136095794968026 -0.0750717062107486 0.483372644076422 GCAATATGGCGGAGGCGGAAGGGGAGAGTCTGGAGTCCTGGCTGAATAAAGCCACCAATCCTTCTAACCGCCAGGAGGACTGGGAATACATAATTGGCTTTTGTGATCAGATCAACAAGGAGCTTGAAGGGCCACAGATTGCCGTCCGACTGCTGGCCCATAAGATCCAGTCTCCACAGGAATGGGAGGCAGTCCAGGCCCTGACGGGCCGCCTCTCCTGGTTAGGTGCTTCCTCGGGCGAGTGTTGCTGGCCAAGTGCCAGGTCCTGGCCTGAGCGCCTGGCCTCTGTGCTCCAGGTGCTGGAAGCCTGCATGAAGAACTGCGGGAGGAGGTTCCATAACGAAGTGGGGAAGTTCCGCTTTTTGAATGAGTTGATCAAGGTCGTCTCTCCGAAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTTTATAGCTGGACGTTGGCCTTGCCGGAAGAATCAAAGATCAAGGATGCCTACCACATGTTGAAGAGACAGGGCATCGTGCATTCCGACCCGCTGATCTCTGTGGACAGGACGCTGATCCCGTCTCCACCACCTCGTCCCAAAAACCCCGTTTTTGATGACGAGGAGAAATCCAAGCTTTTAGCCAGGCTGTTGAAAAGCAAAAACCCGGACGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGAGGATGAGGCGCGGGTCCAGAAGGTGACCGAGCGTCTGCACACCTTAGAGGAGGTCGATAACAGCGTGAAGCTGCTCGGTGAGATGCTGCGTCACTACAACAGGGAGGGCTCCGCAGAGGCAGACAAGGAGCTCATGAAGGAGCTGTTTGATCGGTGTGAGAACAAGAGGCGGACGTTATTCAAACTCGCCAGCGAGACCGAGGACAATGACAGTAGTTTAGGGGACATCTTACAGGCCAGTGACAACCTCTCCCGGGTCATCAACTCTTACAAGACAGTCGTTGAAGGGCAGGTCGTCAACGGTGAGGTGGTGACCTCAGCCATTCCCGACTCGGAAGGAAACCAAGGCACTCTCATCGACCTTGCCGAGGTGGAGGCGCCGAGCGGCCCGCCCCCAGCGCTGGCCCCTGCCCCCGCCGGCTCAGGCATCCCTGTCCTCCCCCCGCCTCCCCAGGCCTCGGGCCCTGGGCGCAGCCACTCGGCCGGCCAGCCCGAGGCCCCCCCAGGGCCCAGCAGCACGAGCAACGCCCTCAGCCTGCTGGACGAGGAGCTGCTCTGCTTGGGCCTCACCGACCCGGCGCCCAGTGCTCCTCCCGCCAAGGCGGCTGGGAACAGCCAGTGGCCCCTGCTCCAGAACGAGCGGTCAGACCTGGACTTCTTCAGCCCCAAACCTGGGCCGGGAGCCTGTAGCCCCACAGATGGGCCTCTCCTCCAGCCTTCAGTGGCCCCCATAGGCAGTTCCCAGGCCCCGGTGGCCCCAGCTGGCGTTCCTGTCCCCACAGCCAGCCCCTTCTTGTTCTCCACTGGCCTGGCCTCAGCTCTGGCCCCAAAGGCTGAGCCCATCGCCCCTGGGCACCGTGGTTCCACTTTGGGCGACAGCACCCCGCACCAGCTGGATGCCCTCGACCAGCTTCTGGAAGAGGCCAAAGCGACCTCGGGCCTGGTGAAACCTGCCACCTCCAGCTGCTTCCTGGGCGCTGCCGCCCCCCCTCTGCTCCCCAGTGGCGCCTCTGCTCGGCCTCTCCTCCCCCTCTCCGCGGGGCCCAGCAGCCCTCTCTTCCAGGCCCAGGGCAGCCCCATGAAGGGGCCCGAGCTCTCCCTGGCCAGTGTCCACGTGCCCCTGGAGTCTATCAAACCTAGTAGGTGTTGGAGGCTCGGGGTGAGGGGCGGGGGTCCCAGCCTGCAGAGGTGTGGGCTGCATGGCAAGGGATGGGTGGGTCCAGGCTTTCTCGCCAGGGTCCCTTAGAGCCGTACGCGGCCTTCCGTACCGTGTCGCAGACTGTGCTCGTCCCCGCTGTGCACTTGGGAGGTTCTTCCCAGGCTCCTTCAGGAGCTTCCTGGTCCCGGGGCCACCGTGACCTCTCGCTTGGCTGTGGTGCTTTGTCTCAGGCCCACCTCTCCCCCCACCCTCACCTGCCCCGTTCTTACATACAGGCAGCGCCCTTCCTGTGACAGCCTATGATAAAAACGGCTTCCGCATCCTCTTCCATTTTGCCAAGGAGTGTCCTCCAGGACGGCCTGACGTGCTGGTGGTGGTGGTGTCCATGCTGAACACGGCTCCCTTGCCCATCAAGAGCATCGTGCTGCAGGCCGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCCTCTGGGACAGAACTCTCTCCTTTCAGCCCCGTCCAGCCACCTGCAGCCATCACGCAGGTCATGCTGCTGGCCAACCCACTGAAGGAGAAGGCGAGGCTTCGGTACAGGCTGACCTTCGCCTTGGGGGAGCAGCTGAGCACCGAGGTGGGTGAGGTGGACCAGTTCCCCCCTGTGGAGCAGTGGGGGAACCTATGACCCCAGAGGACACGTGTCAGCTGCACTTTGGAGCCCAGGCAGGCTATCCCGAGAGGGGAGGCTCTCCAGGCCTGGTCTTCCTTCATGTCCTAACCGCTGTGCTTAAGAGCTTTGACGTGGAACAGGGGCCCGGGCCGCTGCTGTGATCTCTCTTCCTTCGGCCCCTAAAAGGACCTGTTTTTTTATTTACCTGTGTGACTTGAAGTGGCCACGTACATCAGGAGTGGGGAGTGGCCCCAGGTGCCGCCCCGGGACATGGCCCCAAGGCTGGAGTGGGTTTTCCCCTTGCGCTGGCATCCTCTGATGCAGAGACTCAGGGCCCTCCTTCAGGACCATGTCCTCACATCCCCAGTTCTCAGTCCCCCTGCTACCCAGGCTTCCCCTTGGCAGGCTCCTGGGAGGAGGACACAGCCCACGGCTCCCGGATGGCCCTGGGCCCAGGGCGCTGGTACTGCCAGATCGCCACCCCTGCCTTCTGTGGGCAGCACGACCCTGGAACGGGCACCAGAGGAGTTGTGCTGGGCCCTGGCAGCAGCAGGCTGTGTCCCATGGACATCACGGTAGGATGAGGAGCTCAAGCTGCTAGAAGTAGAACGTGGCCTTGTGGCAGCCTAAACTACACCCAGAAAAGGAAATGGGAGAGAGCAGTGTTGTGCCTTCTCCGGAAGCAGGTACCCAGCACTTTCTGGGAAAAGGGTGCCTCCTGCCGTGGGAATAGGCCATCTCACTCACTCACTACCTCTTGCTCATCGTGGAACAAACCGCTGTGCTGCCTCTGAAGGGGAGGACAGCACCCTGTGTCCCGCTTTGGCCCACCTCCTCCCACCAGATGGCCTGCGGGGTGGCTGGCTGTTGGGAACAGGAAGCCTCAGGATCAGGCGCGTTGCACTAAACTTATGTCCTTACCTGCTGCCCAGAAACCCCGAGTCCCCAGTTGCCAAGGGGCACTGTCGGCGATATGTTGGGTCTGGAGGTGGTGAGATTAGGGGCCTTGCTTGAATCGAGTCACCAGACCCTATTGCTTCAGCAGTGCTCCATCCACTGGCTACAGCTAGGCCGGGGAGTCCAGGCCTCACGGGGCGACAGGCAGGTGAGACCCAGCCGCTGGGGAATGAGCACATGGCTCATCTGCACTCAGCTGGATGAGCCAGAGCCAGCTCCAGGGAGAGGCAGCCCTGACCCCTCCCTGCTCTTGCCAGGCTTCCTTAATCAAGAGGCCATCGCCCCCACCCCTCCCCTCATCAGCGAGCAGGTTTCACTGCTTCATTAGGACAGACGAAAGAAAGTGAATCCATTTTACTTCTTAAGGAGTAAATCCAAGAGCTCCAGAGATGGGCTGCTGCAGCCCTGGGAAGCTCTGTGGGACTACTACACGGAATGTACCTTTACAATAAGCTTTAGACTTTAGAGTTACTTATGAGTGTTACTCGTTACTATTGAGGTCACTTCGTGACAAAAAACTGTACTGGATATATCAACTGCTGCCCTTGTTTTGCTGCATGTTAAATAAAACCATTTTTGCCCTATTTGGAATCTTTCTAATACAGATACCAGTCACCCCAGTGTGGGGAAAGGTGCCACTTGGGAATTCCAAACGCAGGCAGGCAGCTATGCTGGTGCCACCTGAGGTTTCTGTTAAAACATAAGTTCCTAGACTGTTTCCTTTTTTAAAGAAGATAACCAGCCAAGGGGAAAGATGAGGGGAAGGGCTAGTTAAGGAGTTCAGGATGGACATGTACACACTGCTATATCTGAGCGAGATAACCAACAAAGAACCTACTGTATAGATAGCACAGGGAACTCTACTCAATGTCACTGTTACAGGGCAGCCTGGACGGGAGGGGAGTTTGGGGGAGAATGGACACGTGTATGTGTATGGCTGAGTCGCTCCGCTGTTCACCTGAAACTGTCACAACAATGTTAACCGGCGGTACTCCAGCACAAGATAAAAAGCTGAATTAAAATAACCAGAAAGTTAACAGATGATTCTGAGGTGAAGCCAAGTTTCAGATGCACAAGCAAACCACTCAACACTCTTGTTCAGGTTTCGACCTGCAGGCAGGAGGGCTCTGTGTTCCCTGTAACTTCTTTCCAAGGTGGCTACCTCAGGTTTCTAGTGCTGGCAGCTTAAAACCTCCCCAAGTGTAAGAACTATAAGTTCTGTAAGAACTTGCCTGTATTTGCAAAAAGAAACATTTATTCTTTTAAAAGTGTATATACATTGCCTTTACAAAGATACCATGTTGGAGCCAACTTCAGGAACCTTCCAATGAGCCTTCTTTTATAATTGACCGAGCAAGATTCCGCGCAAGAGCA EMBV3_02424 CTGATGGACAGCCCCCACGGCCTTACATAACGCTTCCTGAGCGACTGCCTTCTGAGTCTT Gene BVT0102_227201 + 0 NULL GK000017.2:70967199-70983923 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076185 TCONS_00076181 TCONS_00076184 TCONS_00076172 TCONS_00076180 TCONS_00076173 TCONS_00076182 TCONS_00076174 TCONS_00076186 TCONS_00076179 TCONS_00076183 TCONS_00076193 TCONS_00076187 1 XLOC_046749 Coding TCONS_00076173 XLOC_046749 Coding Coding NF2 17:70894149-70969597 j TSS57234 4311 1 TCONS_00076173_2 517 0.00951055439573185 15 0.943059366177582 5.18252573119851e-59 2.22434062486452e-32 4.35142731261824e-17 3.01657132853931e-17 5.23416681288794e-24 6.64930106846915e-53 7.41652925332322e-97 8.50370159501265e-62 1.16138181983021e-33 2.42054549213458e-05 1.13773198576326e-05 3.00327080352931e-05 1.60558556405554e-45 2.38085524132255e-24 1.4346158814284e-82 5.38690901114377e-10 0.000559912194807232 0.000102279043461811 0.00016311971885252 1.69409998394768e-26 3.01608884448419e-57 0.000521735663047482 0.000908929169607122 0.000748461354834158 1.50933224867256e-42 1.05881690085446e-44 3.15302942780946e-44 0.000365278282007121 2.02058171422795e-05 0.000515902813992676 XM_003587173.2 NF2 PREDICTED: Bos taurus neurofibromin 2 (merlin) (NF2), transcript 0.0 7317 100.00 0.940848990953375 NM_181829.2 NF2 Homo sapiens neurofibromin 2 (merlin) (NF2), transcript variant 6, 0.0 2244 81.09 0.514265831593598 TCONS_00076173_2 sp|P35240|MERL_HUMAN MERL_HUMAN Merlin; 0.0 1008 90.50 0.998065764023211 4 coding 0 0 1 1 -0.818149239137156 0.0753723397802179 -0.0036384335865684 0.970418471087175 GTGGGGTAGGTACAATTATTACCCACCTCCCTCCTTGGGATCTCAAAGACTCCGATACGACTTAGCGACTGAAGAACAACAATAACCCTCGATAATAATTAGAATTTCTCCCTAAAAAGAAGCAAAAGATGAAGTGGAAGGGGAAGGACCTGTTTGACTTGGTGTGCCGGACCCTGGGGCTTCGCGAAACCTGGTTCTTCGGCCTGCAGTACACAATCAAGGACACCGTGGCCTGGCTCAAGATGGACAAGAAGGTGAAGAAGCAGATCTTGGATGAAAAGATCTACTGCCCTCCGGAGGCGTCTGTGCTCCTGGCTTCTTACGCCGTCCAGGCCAAGTACGGCGACTATGACCCCTCTGTTCACAAGCGGGGATTTCTGGCCCAAGAGGAATTGCTTCCAAAAAGGGTAATAAATCTGTATCAGATGACTCCGGAAATGTGGGAGGAGAGGATCACAGCCTGGTACGCGGAGCACCGAGGCCGAGCCAGGGACGAAGCGGAGATGGAGTATTTAAAGATAGCTCAGGACCTGGAGATGTATGGCGTGAACTACTTCACAATCCGGAATAAAAAGGGCACAGAGCTGCTGCTTGGAGTGGATGCTTTGGGGCTTCACATTTATGACCCTGAGAACAAGCTGACCCCCAAGATCTCCTTCCCGTGGAACGAAATCCGGAACATCTCCTATAGCGACAAGGAGTTTACCATTAAGCCTTTGGATAAGAAAATCGATGTCTTCAAATTTAACTCCTCAAAGCTTCGTGTCAATAAGCTGATTCTCCAGCTGTGTATTGGGAATCACGACCTGTTTATGAGGAGAAGGAAGGCCGATTCTTTGGAAGTCCAACAGATGAAAGCCCAGGCCAGGGAGGAGAAGGCCAGAAAGCAGATGGAGCGGCAGCGCCTCGCTCGGGAGAAGCAGATGCGAGAGGAGGCTGAACGCACGCGGGATGAGCTGGAGAGGCGGCTGCTGCAGATGAAGGAAGAGGCGACGATGGCCAACGAAGCCCTGATGCGGTCGGAGGAGACGGCCGACCTGTTGGCCGAAAAGGCCCAGATCACGGAGGAGGAGGCAAAGCTCCTGGCCCAGAAGGCGGCAGAGGCTGAACAGGAGATGCAGCGCATCAAGGCCACAGCCATCCGGACGGAGGAGGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAGGCTGAGGTGCTGGCGCTGAAGATGGCTGAGGAGTCGGAGAGGAGGGCCAAGGAGGCCGATCAGCTGAAGCAGGACCTGCAGGAAGCCCGCGAGGCAGAGCGAAGAGCCAAGCAGAAGCTGCTGGAAATCACCACCAAGCCCACGTACCCGCCCATGAACCCACTCCCAGCACCGCTGCCTCCCGACATGGCAAGCTTCAGCCTCACTGGCGACAGCCTGTCTTTCGACTTCAAGGACACCGACATGAAGCGGCTTTCCATGGAGATAGAGAAAGAGAAAGTGGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAAGACCGAGATCGAGGCCCTGAGACTCAAAGAACGGGAGACGGCCTTGGACATGCTGCACAACGAGAACTCTGATCGGGGCGGCGGCGGCAGCAAGCACAACACCATCAAAAAGCTCACCCTGCAGAGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAGCTCTAGCAGGTGACCCGGCCGCCCCAGGATTGGCTGCTTCTGCCCGCCTGCCCCGGCACCGACGGGACGGGCCTTACACCGCGGGAGCCATCCAAAGGCAGGCCGAGCGGAGAGCCCAGGCCTTTCATGTGCAATTGCCTTGAACTATGACCCCGCAGAGGGTTCTCTGGTGGGGTTCTAGTTCTCCTGACCTGAGTCTTTAGGTCTTTTTTAAGAAGTATTTGTCTCTCCTTGTCTGATGTGGGGTCCTATGCTTCCTTCGTCCAAAGCACCCTGGAGTGTGTGTCTTACTGTCCCCCCCTCCCCGGCCCCGGCTGACCGCCCCGGTCCCCCGGCTGGGAAGTGGCTGCGGGGAGGGGAGTACACAAACCCCCTGGAGACCCGGAGGCTGGTGCCATCCCCCACCCCTGCCCCCAGGGTTCCAGAACGTTCATCTCCTTCCCTGGTGAGGAGCTAGTGTGGGGAGAAGGTGGCCCAGAGTGGCCCGCCTGCTCCACGTCGTCGGAGAGCTCGGCCATGATGAGCCGGGAGGAGATGGGCACCCGGCCCAGGCACCCCCGGGGGGCAGCGCTCTGGCTGCCCGTGATGGGGAGTGGAAACGCAGCTGTGCCCGGGGAAAACCCGGCCCAAGCTGTGGTGAAGGACTGGCTGCTGGCAGAGGGCCTGGGAGGCCAGCCAAGCCTGCACCTGGAACTTGCACCCTACGAAGCTCTCACTGCCTCTCTTCTGCCCGCTCAGACCCAGGTCTGAGAGGCAGGCGTAGGTGGGGTGGGCCTCTCCAGCTGGAGGCTCTCCTGAAGGTGGCAGGGGTGTGAGGGGGATCCCCATCGCTGTGGTCAGCCCAGCCACGACCAGGGTCTCCGCAGGGCTCTTGAGGCCCCACAGGGATGTCTCACTGGCCGCGGCCCGTCTTGTCGATCTGAACCATCCTTCCTCCTGGCCACGCGCCGGCACAGCCCCCCACCCTTGACGGTGCCGGGGCCTCCTTTCCTGCTGCCCTTGTCTCCCTAGAGCCTTCACTTTACCTTCTCCCTGGGCCGTGGGGGGAGGGGTGCAGGTGACCCCTGGGCCGGGTGGGGGCGGGGAGGCATAGTCAGTGCTTGGCGCCTGCTGGCACGTGGCCCCCCCCACCGTGCGCCCACCCAGGACCCACACTCACTCCTCGGTCTGGGGCCACTCTCCCGCCCTTCCTCCATGGCCTGCTGGACCCCCCAGCCTGTTTACATCCTTCCCACGGGGCTCTTGCGCAGAGTGGCAGGAGGGAAGTCTCATCCAGTGAGAAGACGCTTCCCACGTGAAGACCTGTGAGGGCCCTGAGATTCCCCGGGGGCAGAGGTGGTCTCTGGCCATCCTAAGTGGTTTTGAGAGACTGAGACGCTCACAGAGATCCTGCCAGATTCCACGGTCAAGCTGCCCCAGCGGTTGTCCTGGGCTGGCCGCCACTGCCTTGGGCCACCCTGCCCGTAGGCAGCCAGCCCCTCGAGACGTGCAGGGTGGGACTCTGAACACTAGGCACGAACGGCTGTTGCTGGGAGGTTCCCCTCCGTCTCCCCTGTCCCTCCAAGGCCTCTTACCCTGAGACAAGGTTCCCGGTGGGGGTCCTCTAGCGTTTGCCTGGCTGTCTCCTCAGGCTCACCACCCACCCCTGACCTGTAGATTTAGTCTGTAACAGTGGCTGTGGGCCCAGAGCATGGTGGTCATTTATAAAAACGTTGTGGGGTTTTTATTATTATTATTATTATTTAACTGCTGCTTGTGTGTCTGAAGTCTGTGGCCACAGGGGAGCGGGCTGGCATCCGAGCCGTGTAGGGGAGCTGCCTCGGGGTGGGAGTGGGCCGGCTGGAACACCTCAGTTTTCCTTGGGGACAAGAGTGGGTGGGTACCTCCCGGAGATGGACAGGCGGAGAGGACGGGGCCCTCCTAAGGGTCTTGAGCCCGAGTGGAAGAAGGACTTTGAAAGAGGAGCTCCGTTCTCAGGGCGCATGCCCACAGCGGAGGCGACTGTGATGTGTCAGTGGGCGAGCTGAGGGCTTGTCCAGTTAAGGAAGCCCCTGACCTCCACCAAGAGCAGGGCCCTGCCTGGGATCGTCGGGTTAGAAGCGCCCCTGATAGTCACTGGGCGGAAGCACTGGGCTAGTGAGCCCCGGCGGGGCTGCACCGGCGGCTCTTGGTGGGCACACGCAGACCACCTCGCTGACTTGCTCCCCGCCCCTGCTGGGCCCCGGGGCCTCTGCCGTGTGCGGTCCCTGATGGACAGCCCCCACGGCCTTACATAACGCTTCCTGAGCGACTGCCTTCTGAGTCTTGGGGACAGGCTTCTCTCTCTCCCTCTCTTTTCTCTTTCGAATCCAAACAGCACGTTCTGAGGCTGACAACCGGCCACAGCGACTGAGCGTCGCCCGCTGACAGGGCTGAGACCCGGCGGCCTTGGTGGGGAGACAGCCGCTGCCCCAGGGCCAGGCCGGCCCCTCTGGGCTTCCAGGGAAGCTCCCTCGGTTTTCAAAGACATCAAACCACCCTCCCCCATCCCATGGGGCCTCCTGTCAGAGCCGGACCAGGGAAGGGTATTTTCTATTCTGGCGGACTGTTGTAATTTAAATGTTTGTTTTAATAAAAATTCTAAACTGTAAAAAGT EMBV3_10202 GAGGCTCCTTGGGAATCACCTTGAAGACCCGTTACCATATTCAGCAGACTGATTTCGTGC Gene BVV0102_154168 + 0 NULL GK000023.2:16407590-16478579 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40872 GCTGTACATCTGGAACGTGCTGTCTGGGAAAGTGGAGAAGGTCCTCTCAAAGCATCACAG Gene GeneID:509587|ATG16L1:XM_002686559:50_cdna UTR3_Alt 3 NULL GeneID:509587 3 GENE ATG16L1 NULL ATG16 autophagy related 16-like 1 (S. cerevisiae) EMBV3_07812 GCGGCTTCCGGCCCCTGGAATGTGATGTTTTTGGTCATCTCCAAAGGCTGCAGTTTTATA Gene GeneID:359716|DNMT3A:XM_002691463:317_cdna UTR3_Alt 2 NULL GeneID:359716 11 GENE DNMT3A NULL DNA (cytosine-5-)-methyltransferase 3 alpha EMBV3_18720 GGCTTAAGATGTGGTTATGAGTAAGCCAGTCTACTGAAGCGAGAGAATGGAATTCTTAGG Gene BVT0102_023525 + 0 NULL GK000016.2:62128368-62138402 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067819 TCONS_00067820 TCONS_00067824 TCONS_00067828 TCONS_00067830 TCONS_00067825 TCONS_00067829 TCONS_00067822 TCONS_00067821 TCONS_00067827 TCONS_00067818 1 XLOC_041551 Coding TCONS_00067830 XLOC_041551 Coding Coding SOAT1 16:62114176-62130950 j TSS50916 4347 1 TCONS_00067830_5 407 0.0195537152058891 12 0.741548917903774 0.00317861712420112 0.00142295223201124 0.00311793201501762 0.00190807645800277 0.00327250836679654 0.000272442686137484 0.00311342265391994 0.00163420986567398 0.00413662675777764 3.88331976328236e-50 4.41818319272876e-35 9.30568221032053e-59 3.00216539960958e-31 3.44278067608847e-14 0.000428778908677387 1.73211126439623e-06 0.00173212015540465 0.00518589433342471 0.00374504461598785 0.0031808332961509 0.000650989228960516 0.000313956823928803 0.000657953762160187 0.000681638797237153 0.00262940924136366 0.00459493619242427 0.00273233397033487 0.00103342531068072 0.000238240944749397 8.76143940701245e-05 XM_005217031.1 SOAT1 PREDICTED: Bos taurus sterol O-acyltransferase 1 (SOAT1), 0.0 4060 100.00 0.5175983436853 NM_003101.5 SOAT1 Homo sapiens sterol O-acyltransferase 1 (SOAT1), transcript variant 0.0 2556 77.90 0.721417069243156 TCONS_00067830_5 sp|P35610|SOAT1_HUMAN SOAT1_HUMAN Sterol O-acyltransferase 1; 0.0 747 86.73 0.997542997542998 1 coding 1 1 1 1 -1.03297361052618 0.00980517931256576 -0.149512896158216 0.157341014092241 TTTTTTTGGTTCTGTGTCTGGTTTCAAAGGAGAAGTTGTACTGAGCTGTTTGAGGTGGACCACATCAGAACAATATATCACATGTTCATTGCCCTCCTCATTCTCTTCATTCTCAGCACACTTGCAGTAGATTACATTGATGAAGGAAGGCTGGTGCTTGAGTTCAATCTCATGTCTTATGCTTTTGGGAAACTTACTGTTGTTTTGTGGACGTGGCTCACCATGTTCTTATGTACACTGACAGTTCCTTATTTCCTGTTTCAACGCTGGGCCAGAGGCTATCACAGGACTTCTCACCCAGTGGTCCATTCTTTCATACACTGCTTCCTTTTTGTGGTCTTCCAGATTGGAGTTCTAGGTTTGGGACCACTTTATGTTGTGTTAGCATATACACTACCACCAGCTTCCCGGTGCATTGTTATATTAGAACAGATTCGTTTTATAATGAAGACCCACTCATTTGTCAGAGAGAATGTGCCTCGGGTACTCAATTCAGCCAAGGAGAAATCAAGCACTGTTCCAGTACCCACAGTCAACCAGTACTTGTACTTCTTGTTTGCTCCTACCCTCATCTACCGTGACAGCTATCCCAGGACCCCCACTGTAAGATGGGGTTATGTGACTATGCAGTTTGCACAGGTTTTTGGTTGCCTTTTTTATGTGTACTACGTCTTTGAAAGAATCTGCACCCCCTTATTTCGGAATATCAAGCAGGAGCCCTTTAGCGCTCGTGTTCTGATCTTATGTATATTTAACTCCATCTTGCCAGGTGCGCTGATACTGTTCCTTACTTTTTTTGCCTTTTTGCACTGTTGGCTCAATGCCTTTGCTGAGATGTTACGCTTTGGTGACAGGATGTTTTATAAGGATTGGTGGAACTCTACATCGTACTCTAACTATTACAGGACCTGGAATGTGGTGGTCCATGACTGGCTATATTACTATGCTTACAAGGACTTTCTCTGGTTTTTCACGAAGAGGCTCAGGGCAGTGGCCATGTTAGCTGTCTTTGCCGTGTCGGCCACGGTGCACGAGTACGCCTTGGCTGTGAGCTTGAGCTTTTTCTATCCAGTGCTCTTTGTGCTCTTCATGTTCTTTGGAATGGCTTTCAACTTTATTGTCAACGACAGTCGGAAAAGACCAATTTGGAATGTCCTGATGTGGACTTCCCTCTTTGCGGGCAATGCAGTCCTCCTGTGTTTTTATTCTCAAGAGTGGTATGCACGTCAACACTGCCCTCTGAAAAATCCCACATTTCTGGATTATATCCGGCCACGTTCCTGGACTTGTCGTTACGTGTTTTAGAAGCTTGGATATTGTTTCCTTCCTTGACACTGAAGATTGGGTATTACCTGACTTGGAGCCAGCATCTGTTTTCAGCCATCATGAAGTTATCTGTGTTATTTGGACCACTTCAGGCTTTACAGATGGCTCACTCCATTCCTAGGTCACCTGAAAATGAGCTGTTAAAAGTTTACTGGAAGTTTGGACACTTTTAAGCAGTCAATTTTTTTCCTTTTTGGGAAAAGGGAAACTTGTAGCTGATGTAACAACAGATTTTTGCTAAGTCATATCAGCTTAAATCTCAGAAATTTGGTTTTGTTTCTTAACTCCATCTAATTAGAGACCAAACATCATGTTTTTTTGGCCACTGAATTAGCCAGAATGCTGCTGAAGAAATCACTTAAGTACCTGTGGCTTAGAAATTTTTTCATGCACACTATTGGAATGTATGCTAATAAACCATGCAATTGGGAAAGAAAATAATGTGGAATGTTTTCCTGTTTCTAGTAGAGAAAATATCTATTTTTCCAAATATAATCTTATTACATATCCTAATTTGTATTTTTAAGTTCAGGTCTATTCAATTTTTATCTTGTTTTTGCTATACTATGTAGTCATGATATCTGTGAAGCAAAATTATCCCTTACACCTTGAATTCTTGAGTTTGCATCCATAATATTATATATCGAGGGGGACAAAAGCAGGAAGAGAAAAAGGAGTGAGGCCGGACAAAGAAAAATATTTTCTAATGTATGAAGCAGTTTTGAAAAAGAACTTGCAGAATCAATCACGTGTTTAAACTATTTTATTGTAGAACTTATGTGGAAGATAAATTTTTTGTTGTTGTTTAAACTTTCAGGTAATAATTTCTTTGAAGTTATTTAGAAGTAACCATTGGTATAGTTGTTTTATCTAATGAATACTGACCTCCGTTGTTTTGCAGACTAGTGAGTCTGTATCATAAGTATTATCACAACCATTAATATTAAAGGGAATACTAAAGATCCAGAGAAGCTGGCTTCTGCATTCACTCAATTATTCTTAATGGTAGTATACTTTAGGTACAGTAAATAATAGGTGGTCATTTTCAAGAAAATGTACTTTATTGTGTGATGTTCCCATGTTATAAGATGCCTAAGGCTAATAATACAATGTGGTGTGCAGGAATTATTTTGGTTGTTTATATGAGGTATGATTATGTCTGTAAAGATGGAGCTTTGGAGACCATGTAGGTCCACCCCAAAGAAGGGAGACTTAATTACTCAAAACTGGGAAAGCAGCCAACTTGAGAAGCTATTATCTTGGTATTCTGGTAGCCCTATTGCTGTCTAGAAAGTTGTGAGAAGTCTTTTTCAAACTGATGTAACGTCAGTCTGAACCTCACAGAAAGGTAAGTAAAATTTCTTGAAAGTCATAACTGTTGTGTGTGCTGCAAGTGCCCAGCTAAGGCCCCGCTTTTATTTCCCATGTTTTTGGTCCAGCTGAGCTTAGGCAAATCCAACCTCAACAGACAAAACCGTACCTCAAGGAAGGTTATTTTTAAAAGGTACTCCACATGTTCCTAAGCAGTAATTATCTGTACAGTGGTATTGTAGTTGTAATGGAATAACATTCCAATAAGACTGCTTTAATATAGCTCACAATTTCCAGCATTTTTCTAAAAATTAAAATGAGTCTATCACTGGAACTTAGAACTACATTTTAAATACAAAGAGGGAGCTGAGAAAAGCACACTGGTTTAAGATGTGGTTATGAGTAAGCCAGTCTACTGAAGCGAGAGAATGGAATTCTTAGGTCTGTATTTTTTGTTCAGTACTGTGAATGTACACTCCATTGAGAGGACTTTTGCTGTGTACTCATTCTGAATACTGTATTTATTAGACTGATCAAGGCTGGGTTTTGTTTGTTTGTTTTTAAACTCTCATCCTCCCTTTGTTTATTAGTACTTTTTTTTCTACCCAAGATTTTAAAGTGACAACAAATAATATGTATATAATTATAGACTGTTTAGAATGATAAGACTGTCCTAAGATATTTTGAGAAATACTTAAAGGAAAAGCCACTTTCTGTGAAAGACATTAGTTTAACAGCCATGATCTTAATATTAGCTGCTTTTATTGAAAGTCTTGCCTTTAGAGAACTACTTACACTCTTCTAAACAAATAAATTAAACTAAAACTTCTTACTAATGTGTTTCAGAAAGATTTATTGAGTTTGTTTTTTCATTCCCTTCTTTTGTTAATAGCGGTGGAAATGATTTTCACTTATGGAATGATACTTTTTTCCTTTTGAAAAGTAATGAGGTTAACATTTCTTTTCTATAAAGTATTAATTAATTAATTAATTTTCTATAGAGTTAATCATTAGTTTGAGTGTGTTACCTAAGAGAACAACTAAGATCTCTAATGTCATACATTTGTCAGATGCTTTTATTGTTGGTTCTGGATAGGGAAGGAAAACGGAGGGTGCTTTTATTGGTTTTTGGTGGATTAATTACTGCAATTGCCTAGGTAAAGTTGCTTCCTCATGTTAGAGCTTAATTAGAAAACCAAGGCTGCAATTCATTTAGTATGGGCAATTTTCATCATAATATAAAAACTATACTTGCCTGAAAAATTGAATCCTGAAGTCTTTATAGGAAACATAACAGAACATTGTGTGTTGTAAAAGTTTGTTACATGGGCTACATAGGCTAAAAAGATGTAAGTTATGAATTGTTGAAGCCTTTTATACAAAAATATTTTTGTTTTGTGTAGAATTATGTAATTTTGAATAAAGTTCATTGTTCTCTCCGGGGGAAAATGACGAAGATAAACTAGCATATCTGTGGTAAGTAGGTGGCCTAATACATAATACAGTGTAGTAGTTTAAATATGTTAGTTTTGAAACCTTTTAAGAAAAATTAAATTGTTAGGCTTAAGCCCAGCATATAAAACATAAAATATAGCTGCTTCTGGTTCAGATCGGGATATAGGGCTGGAGCCCTTCTTGTTTGGTTATACCCATTTCCTGCTACTCAGAATACCCCGTTTGTAAACCACCAGTGTGGCAAAAACAAAAAAG EMBV3_30520 CTTGTGGGATTTTGCATAGTTCCCTGACCAGAGAGTGAACCCCGGCAACAGGTGCAGAAT Gene BVV0102_217324 + 1 EMBV3_14610 GK000019.2:10395907-10410437 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29967 AGTCAATGATTACAGGGACTGGGGATGCTCACAAGGCAGTTTCTGCAGCCAGTGGGACAG Gene BVV0102_433343 + 0 NULL GK000005.2:56748243-56763172 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191968 TCONS_00191970 TCONS_00191967 1 XLOC_117067 Coding TCONS_00191968 XLOC_117067 Coding Coding TAC3 5:56739776-56750657 j TSS143756 785 1 TCONS_00191968_1 126 8 0.928584558823529 7.89522120465381e-11 9.44899445566205e-09 6.42642931528852e-06 5.53678241109822e-05 0.000327075194541205 0.00133881289763246 9.9172502312205e-10 1.14755480076629e-09 6.32455321067855e-12 1.28395657767072e-09 5.36204661614386e-06 0 5.38434104161362e-10 0.000314448479528878 1.22794600949998e-05 5.12168859110758e-09 0.00134981551271791 0 1.2588773330464e-09 0.000118283966497869 0 0 1.31424621113247e-09 3.134682739254e-09 9.09209440468577e-11 1.47789528034009e-09 0.000166905120109802 0 0 1.08304905319875e-09 XM_005206506.1 TAC3 PREDICTED: Bos taurus tachykinin 3 (TAC3), transcript variant X1, 0.0 1357 100.00 0.956687898089172 NM_013251.3 TAC3 Homo sapiens tachykinin 3 (TAC3), transcript variant 1, mRNA. 3e-145 518 75.03 0.954140127388535 TCONS_00191968_1 sp|P08858|TKNK_BOVIN TKNK_BOVIN Tachykinin-3; 6e-88 256 100.00 0.992063492063492 1 coding 1 1 1 1 -0.0112301359495344 0.930036265552577 -0.000384660271151013 0.99559600376782 ACAGAGGACCCAGGGAGGCAGCTCTTCCCCGTGGCAGCAGCACCAGCAGCGTTCGTGGGGAGCGGGCAGTGCTTCCGGCCAGCTCCCTGATCCTGCTAGACCATCTGTCCCAGGCTCCAAGCTGCTCCACAGGCATCATGCGGAGCACCCTGCTGTTTGCAGTCATCCTGGCCCTCAGCTCAGCTCGGAGTTTGGGTGCGGTCTGTGAGGAGTCACAGGAGCAGGTGGTGCCTGGTGGGGGTCACAGCAAGAAGGACTCAAATCTCTACCAGCTGCCCCCATCATTGCTCCGGAGACTCTATGATAGCCGCGTGGTCTCCCTGGATGGATTGCTCAAGATGCTGAGCAAGGCCAGCGTAGGTCCTAAGGAGTCACCACTTCCCCAGAAACGTGACATGCATGACTTCTTTGTGGGTCTCATGGGCAAGAGGAACCTCCAGCCAGACACTCCTGTTGATATAAACCAAGAAAACATCCCCAGCTTTGGCACCTTCAAGTACCCTCCAAGTGTGGAATGAGCACTCCACTCCTGGACTCCTGGGCTACATCGTGAAGACACCCACCCCTGGATGCACATGCTTCTATTTCCCTTCCTCCTCCCTACCCCTGTAACACTCTTGTGCTTTGACCCCTTCTTCTCTCTGTCCCACTGGCTGCAGAAACTGCCTTGTGAGCATCCCCAGTCCCTGTAATCATTGACTACAGATGGCCCTGGATTTTCTGTAGCATCCTACAAATATAATGTCTCTCTCTATTCCTCAACAATAAAGGATTTTTACATATTA EMBV3_18099 TCTGCAGTGAGGAAGCTAACAGCTGAGGACTGGCACTGTTTATTACGACTCCTTAAAGAT Gene BVT0102_099223 + 0 NULL GK000001.2:71900603-71980543 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001089 TCONS_00001096 TCONS_00001092 TCONS_00001095 TCONS_00001094 TCONS_00001091 TCONS_00001097 1 XLOC_000256 Coding TCONS_00001091 XLOC_000256 Coding Coding PAK2 1:71866812-71960680 j TSS528 9495 1 TCONS_00001091_4 524 0.185150078988942 16 0.899016693832763 0.000262935764267255 6.33552680685565e-05 9.42784255620636e-05 0.000109831962886778 3.83125243324172e-05 2.58498128485932e-05 8.62455437204598e-05 2.1329972273358e-05 8.11346883067707e-05 2.22585256970261e-06 1.20220724392197e-24 4.89417463398115e-05 2.27444980115839e-05 1.64566885893791e-142 2.40820371720871e-08 0.000558120488177047 1.84322179199207e-06 0.000260107166930182 4.93040723205683e-05 3.21714080761216e-05 1.15778723190154e-05 4.00920014893344e-05 3.1865982254894e-31 1.74520110457731e-67 0.000227623432380426 0.000345159136937247 0.000159626969431678 3.40149776495337e-18 2.81060590467647e-15 0.000283468100561646 NM_001206727.1 PAK2 Bos taurus p21 protein (Cdc42/Rac)-activated kinase 2 (PAK2), mRNA. 0.0 4899 100.00 0.285939968404423 NM_002577.4 PAK2 Homo sapiens p21 protein (Cdc42/Rac)-activated kinase 2 (PAK2), 0.0 3633 86.45 0.312901527119537 TCONS_00001091_4 sp|Q8CIN4|PAK2_MOUSE PAK2_MOUSE Serine/threonine-protein kinase PAK 2; 0.0 1065 98.66 0.998091603053435 4 coding 0 0 0 0 -0.00417678430729798 0.979515560434704 -0.0187435595488962 0.688169075990574 CCCGCCGTCGCCCTCCCCCAGGGTTGTGGCCACGCGCAGCGGCGGTGGTTGTTCCGCTTCCCCTCTGGCCTGGGCCGTCGCCATTGCCGAAGGCTCCCTGCCCTCCCCTCCCGGCGCCCGCGGGGCTCGGCTGCCGCCTGGCCTAGCAGTAGCAGCGGCTGCGCTCCAGCGCGGCTCCTCTTCCCGCCCCGCTTCCCCTTCCCTCCCCTCCCCGCCCCGCGTCGCGCGCTTGCTCTGGGCGGCTCCGGAGCCCGCCGGGAGCTCGGCCGGAGGCTCCTCGCTGGGGCGGGGACCTTTCCTCGCCTAGGGCCATATCATAATTCCGAATCATGTCTGATAACGGAGAACTGGAAGACAAGCCTCCGGCGCCCCCAGTGCGAATGAGCAGTACTATTTTTAGCACTGGAGGCAAAGACCCTTTATCAGCCAATCACAGTTTGAAACCTTTGCCTTCCGTTCCAGAGGAAAAAAAGCCCAGGAATAAAATCATCTCTATATTTTCAAGCACAGAGAAAGGAAGTAAGAAGAAAGAGAAGGAAAGGCCAGAAATTTCTCCTCCGTCTGATTTTGAGCATACCATCCATGTTGGCTTTGATGCTGTTACTGGAGAATTCACTGGCATGCCAGAACAGTGGGCTCGATTACTGCAGACCTCCAATATCACCAAACTAGAGCAAAAGAAGAATCCTCAGGCAGTGCTGGACGTCTTGAAGTTCTATGACTCTAATACAGTGAAGCAGAAATATCTGAGCTTTACTCCTCCTGAGAAAGATGGCTTCCCTTCTGGAACACCAGCACTGAATACCAAGGGATCGGAAACATCAGCAGTAGTAACAGAGGAAGATGACGATGATGAAGAGGCTCTTCCTCCTGTTATTGCTCCACGACCAGATCATACAAAATCAATTTATACACGATCTGTAATTGATCCTATTCCTGCACCAGTTGGTGATTCTAATGTTGATGGTGGTGCCAAGACTTCAGACAAACAGAAAAAGAAGGCCAAAATGACAGATGAAGAGATTATGGAGAAATTAAGAACTATTGTAAGCATAGGTGACCCTAAGAAAAAATACACAAGATATGAAAAAATTGGGCAAGGGGCTTCTGGCACAGTTTTCACTGCTACAGATGTGGCATTGGGACAAGAGGTTGCTATTAAGCAGATTAATTTACAGAAACAGCCAAAGAAGGAATTGATCATTAATGAGATTCTGGTGATGAAAGAATTAAAGAATCCCAACATAGTTAATTTCTTGGACAGTTACCTGGTGGGAGATGAATTGTTTGTGGTCATGGAGTACCTGGCCGGAGGATCCCTTACTGATGTTGTCACAGAGACATGCATGGATGAAGCCCAGATAGCTGCTGTGTGCAGAGAGTGTTTACAGGCATTGGAGTTTTTACATGCTAATCAAGTGATCCACAGAGACATCAAAAGTGACAATGTGCTTTTGGGCATGGAAGGATCTGTTAAACTTACTGACTTTGGTTTCTGTGCCCAGATCACCCCTGAGCAGAGTAAGCGGAGTACCATGGTTGGAACGCCATACTGGATGGCACCAGAGGTGGTTACACGGAAAGCTTATGGCCCCAAAGTAGACATCTGGTCTCTGGGTATCATGGCTATTGAAATGGTAGAAGGAGAGCCTCCATACCTCAATGAAAATCCTTTGAGGGCCTTGTACCTGATAGCAACTAATGGAACCCCAGAACTTCAGAATCCAGAGAAGCTTTCCCCAATATTTCGGGATTTCTTAAATCGATGTTTGGAGATGGATGTGGAGAAAAGGGGTTCAGCCAGAGAATTGTTACAGCATCCCTTCCTGAAACTGGCCAAGCCGTTATCCAGCTTGACACCACTGATTATGGCAGCTAAAGAAGCAATGAAGAGTAACCGTTAACATCATTGCCGCGGCCTCATATTCTTTTTTCCATTTTCTAAAAGAAGTCTTTTAATATATGAAAATTATTATTCTTTTGGGGTTTAAAGAAATGGTCTGCATAACCTGGAGAAAAAAAAAATAAACTACTACTTCCTGAAGACAACCAAGAAAAAATTGCAAAACAGAATGACAACTTTAGGGTCCAAAAGGAACTGTGGACTGAATCACTAGCCTTACGTCTTTGTGCAGAAAGCCCGTCAGGGCCATTTATCATGCTTGAGATTTGCATTTTATTTTTCTGATATCATTATAATAGATCCCATTCATTTTCCCTTTTGGGGTGTTTTCAATACTTGAATGGCAGATTTGAGTTTTTCAGAGTATTTGTTTTATCTGCTAGTCTTCTTTTCTCTCTTCTTCATAGCTTTCTTTTTCCTTGACTTTCTCCTTTTGAATTGCTTTGAGAAGTGTTTCTTATGCCTAAATTGGAGGCAAGTGTGATGGAAATTATGTAGCTCCTTATATTGGCAAAGGAACTCAGTATGGTTTAACTTTGTATGGAAGTTAGAACTAGCTATCGTTACATGTAATATTTCAGTTTAGAATTTGAGCTGAAGGGAAGAAAAGTATGTGATTTTTACCTTTTTTTAGCAAATGTGAAAGAGTCAATTTTAGAAATTTCATGGTAGTGAGTTGTTTGGCATTTGTTACATGTATAGAGAGAAGACTAATAATCTATATTTATAACTAAATCATTGAAACAAAAAAAAGAATCCCATTGACTATACTTTCTTAGAGGGTTTTTTTTTTCTTTCCTGTGTCCTCAGACTCTGCTTTAGGACTTTGTGCCACTGCTTTCCTCTTCCCTCTTTTTTCCCCCCTTCATTTTGGAAATAAGTTTCTGTATATGTTGTAAGTTTAGCTAGTTTGTTTGTTTTTTAATTAACCCTCTCTCACCCTACTCCTCCCTCTCCCTTCCCATGGCAAATAATATAATAACCATTGAATTTTAAAATTTAAAACTTAACTATTTTTTTCCATTTAAAGGTGAAAAATATTTGGAGTTAACAGAGACAAAGTGAGAGACTTGAACCTTGCTATTACTAAATTACAGAAAAAGCTGGTTTATCTGGTGGAAAGCTACAGTGTCTCTTGAGTTCCAGATTTGGACATTCTTTGTAAATAGCTGTCTGGATGGATTATAATAAAGAAGATGCTACCAGTGAAATAGAAAACCAACTAAATGACACAAGACTGTGATCCTCATGACCACTCTAGAAGGCACTTGTATACATAAATCATAAAGACCATATTAATTGGATGCAGTGCCAATGCCCCGTTTTTTTGCCTGTGACTCAACAAAGATCTTTTCAGTTTATAAAAGCAGTTTGGGTTTGTATTTACAACTTCTCTAATGGTTACCTGCATGTCCATTGCTGGCAACGGACTTTGTCATTAAAACCTGACTCCTAGGCTAAGGGAGCTACACTGTGGTTTATTCTTTACTTACTTGGATAAACTAACTTGTAATAGAAATATACTTTGGTTAATTCTGAACTGTGTCATTTTTGAATAATCCTAAAAGCAATACAGAATTGTGATTTATTAATTTTAAATTAAAATGTTCACATCTTGTTGCAAGAAAAATTACATCTGAATCAAGATTCACGGTTTTTTCTTAATAACTGCCTTTTGTATTTACCCTTTTTGTCATTACTTTAGAATGAAAATTCTCGTTTAAATCTAAAAATTACCTTAGTAGTCTTCTTTTGTTGTTAAGACAATATTACTATAGTATTTATTATATTTCAGACTCTCTGGCAGTCTAAAAGTTTCCTTTTCTTCCTGTTCCTTTTGCTGCTTTTAGGGACAGTTAAATCTGGGAAACCATGAAAATATTGAATATTTTATTCTACCTAGAATAGTAAAAAACAAGTAGACTGATTGTGCTAGCATCAGAAACTAAGGCTAACACAACTGTCTTTGTGTGTTGAGTGCCTGGCACGTAATATAAATTCTCTTTCCCTCAATATATAAATATTAAGCTGCTTAAGATGTATCTAGATGTTACCACAGTCCTAAATGACCCTGTGCCTTTAATGAGCAATTTAAAACTACCTATGAGTATTTCTTTGTAGGGCTCACATAAATGCATATTTGTTTATATATACTGTATTCTAGTTTGGAGTAATTCTAGATCCGATCAGACAGTGGCTCTAATTAGAACAAGATGGGTGCTTAAAATTTTTGCATTAGTTTTTTAGTCTAAAAATTTAAAAACATACTGAGATTCATATCAAGTGAAATGTCTAAAATCATTATAGAATATAGCTGAAGTCCTCAACTTCTTTGAGGTTTTTTATACTGAAATTCATGGTAATATAAAAAGCAGATTGTCTTCCTTGTCTCAACTGCTCCCACAATAGAGGAACAGTTAAAATCAGTTTTTCCCCACAGGTGTATGAGTATGTGTAAGAAAGGGAAAAAGAAAATACACACACGGATTTTATTTCTCACTAACACATTTATTGACCACACTGACAAAGACGCCATGGTAAATATTGTGAGGATTACAAAGGAGAACTGAGCACCGGCCTGGCCTTGAGAGAACTGAAGTCTTTCTCACTCACAATTCTAGAATGTTGCCAAATGGAGAGAAAAAATGTATGATAATTTTGTCAAGCATACTTTCATTCTGTGTTAAGCAGAGAATTAACTTTGAACATCTTTGGTAGGAATGTCTTGTGGGGGTTTTTTTTTTTTTTTGTAGCTAGAAATGGAATTAAGTGAAAGTAACTTGTTTTCTGTTTTGTCTTCAAATTTTATATTGACTTATTTTTAATTTAATCCCATTCAATTATTTAATTGTTACATTGACATTAACTGCTGTATTTGATGACCTTGTTCAATAATTTTGTTCTTTCAGGGCTAGAAATAAACTTTTTAATGTTCATTTTCCCTTTTCCTAAACTTTAATTCTTTCTTAAGATCAGAGTAGCTTAAAAGAATATATGTAATAGGTTTTCAAAGAACATCCTAGTATTTTTAAGGATGACTATTTTTTAAACGTGTCACAGCACTATGAATGTATTACAGAGCTCCAAATTAGAAAGATTTTCAGAAATCATTGAGTAATAAGCATGAGCCTTCCCTCTTCTAAATCAGGTTCAGAATAAATTTATTCAAAATGAAACATGCAGTGTTCAAAGGCATCATTTCGTTATACACATTTAATTTGAATGTTGGATATCCTAACATGGAGAACAGATGCATTATAGAGTTCAGGATGAAAAAACAAAATTGTATGTAAAAAAGTATGAGGATGTAGGCAATGACTGCTTAAAATATATTTGTTACACTATAAAACTTCTTAGTGCTATTCTGACATCTGTATTTCTTTAACTATGGCAAATGCTCAAAACGTTTGTCTAGGAAAAGTTTAAAAATGCCTGGGTGATTGATTTGATTGAAAAGCACTATTTGTAGGAGCTTGATACATGCTTTACTACTATTTTGAAATTTGCGACTTTTTAAAATTAGAGAATTATTTTTTATGCAAATCATTTTTAAACAAGCTTTATCTTTTGACGAGGAGGAAGAGGAGTAGAACAATGAAGGGAAAGGTCTTTTTTAAGCCTCTTTTTTTTTTAGGTTTTTAGCAAAATAATATGCATAGATAATCTTTAAGGAGTCGTAATAAACAGTGCCAGTCCTCAGCTGTTAGCTTCCTCACTGCAGAGTCCTGCTCCACAGAGGCATCTGCTTTTAACTTTGAACTGGTTTTAGCATGCATTAATTTTCAGATTTCTAAATTATATACTTACACTGGTATTTTTTGATATTTCTTCTAGAAGCTTCCTACTATTACAGTTGGGAATTTGATTACCATGCCATTTTCCCATTTTTACTCCCTATACTCTCCCAATTAAGAAGGGTGGCAAAATTTGATTAGTGGTCAGTTTTTAACTCAATACTATGTGGGAGTGTTGATCATTTGAGTAATTTATCATCACCATATGTCATTTCTTGTTCAACTTTTTGCTTTTCTTATTGTCAATCTTGTCTTTCATTTCCTTTGAAAGCTTCTATGTTCCCATCACTAAGTTTTTCCAGACTCATCGCAAAAGCCCTCTGAAGGCTGTTTTCTATGCAATTAAATGTCTCGGATAAGGACTGTTCCTTTTTCTGATTAGGGCTTCAGTTTGGTCTCTTGCTTTCCAGGCCTTCTGCCCTCTGGCATCTGAGACTGTTTCACTTTTCGACTGAATTTAGAATTTTTGTTTTCCTCTTGCTTGGTTTGTTCTTCATTTTGGAGAAGTACATCTTTCATTAGTGTCCTGAGGAAGGGTGCATATTGGTTAAGATTTTTAAGACCTTGCATGCAAGTCTGAAAATGTCTCAGATTTAATCGATAATACAGGATTTCAGGTTGGAAATCATCTTCCTAGAGAATTTTGAAGTCCCTACTTTATCTGTAAAACCTGCCATTTCTGATAACATCTTTTTATGTAACTCATTTTTCTGCCTCTCTGGAGTTTTTGTTCTGAAAATTTACCTTGAAACCTCGGAGAGGGTCTGTATGTTTAGCTTTTGGCGGGCCTTGTTCATAAAGACTAATTTCCTTCAGTTCTGGTGAATTCTTATATTATTTCTTTAATAATTGCCACATTTTCTCTGTGTTATTTCCTTCTGGCATTCCAGCATTAATCTCCTGTTTTTCTTATCTTTCTCTCCTGCTTTCTTTCCCTTTGCCTTCTGTTTTTAACTTTCTGGGAGAATTTCCTTGATTTTATCTCTGACCCTTTTTTGAACATATATCACCTGTTGCTTCTTGTTTTAATTTTTTTTCCACCCACACTGTGCTGCTTGTGAGATTTTTTTTAGTTCTCCAAAGAGGGCTGATCCTCGCCATGGCAATAAAAGCACCAAGTTCTAACCACTAGAGGGCCAGGGAGCTCCCTCCTGTTTTTAATTTCTAAAAGGTCATTCTTCCTTTCTGATCTTTTTATAGGTTTCTGGTCTTGTTTCATAAATCCAGTATCCTCCCCCGGTGTATTAAAGAGTTTTTCCTTACCTCAGATTGCCATAACAAAATATCATATACTGAGTGGCTTCAACAGCAGAAATTTATTTCTCACAGTCCCAGAGACTTGAAAGTTGAAGATCAAGATGCTGGCAAAGTAAGTTTCATTGTGAGGCTTTTTGCCCTGTAGGTGGCCATCATTTTGCTGTGTGCTCCCTGAACCCCATTCTGTGTATATACACTTGGAAAGACAAGTCTCTCTCTTCTTATAAGAACACTAATCTCATCATAAGATCTCACCCTCATGACCTCATCTAACTTGAGTGACCTCCCCAAAGACCTCCATCTCCAAATTTCAATACAGTATGGGCTAGGGCTTCAGTATATGAATTCAGGGGCAGACACAAATATTCAAGCCAAAATAGGTCTTTTTTTTTAGAGGTTTTTTTTTTTTTAATTATCTCTGGAATTGTTTACTCTTAAATATAACACTGTCTGGAACTGCACTAAACATTTCACATTGATTTTTCTTAATTCTCAGTGGGACTCTTGGTGCTGCCCACTGCTCATTCATTTCACTCCTAGGTCTTTTTTTTTTTTTCCCTTTCTCTTTTTTTCTCCAAACTGTCTATCACCTGACTCCCAACCCTTTTATCTCACCATCTCAACACTTAACTTCTCCCTTACAGCCAAAATTCTGGGGGGTTTTGTCTTTGTCTTCCTTTTGGTCTCAGTGAAAGATGTTTTTCCTCTTGGCGACCAGCCTCACCAGGGACCCGTTGTCAGTATTCTGCCACCTCCTAGGTCTCCAAGCCACTTTGATCCTAACTCTGCTGTGCCTTTTACTTGTCCTTCTGTTCTGTCTAACCCTCAGCAAAAAAAGGCATGCTGGAAAGAGGAGACCAGACTTGTTGTTTCTCTTCATTATCATGTTGCAGCTACCATCAGCATGTCTTTGAAACTACCCTTACCAGTGTCTCAGAATCACTGAATTTGAAATATTCTCAAAACATCAAAAAGATGACTTTCCTCGACAGGTAACTAATGTGCTTACTGGTGTATTTGAGGATTTCCATGATTCCACTCATTATCAGTCTTCCTTTGTACAAAGTAGAGGACTTTCATTCATCGATTTTTAAAAATGTTGTGACTAGATACTTACTTGAGGCTAAGGTTCAGAATGTGATGTAGGTGTAGCTTTGGTAAGCTTTTAATCAGTAGGATTATGTTTTCAACACTGAATATAAAAGATGCAAACAGCTCTTGGTAAACTTAGTATTTGTGAAGGAAGAGTGATAAGGATAAAAAGAGCAAATTCTTAAAAATTTCTTCAGAACTTAATTTGCAGTGTACATTTGAGTAATAGATTTGCCCTGCTAATAATTTTTAGCTCTGAAATGTGTTTCTGTTCTTGAGCATATTAACATGGGCACCTAGAGGAGAAAGACTTAGCTAGGAATGTGCAGAGTGATAGAGGAGAGCCAGCTCGGCCTTAAAAATGGCATTAATTCTTAGTCAGAAATTAAGAGTTGATGAGTACCTCTTTTTTTTTAAAGAGATTTATATAGCCTGTCACAGTGATTATAACATTTTAACCTATGCATCTTAGTTTTTGGTTAGAGGAAAAGACTAAAAAGATTGTCTACAGAAAACAGAATATGTTCAGTATATATTGATAGCCTTTGTATAAATTTGTAACCCAAGTTGATTATTTTGAAAGGAAAAACACTCATGTGGATGTATAATTTCTGGTATACTTGTTTAAAAAAGATCTCATTATTTTTTATCCACAGATCCCAGTGTATGTTCTGTAACAGGTGAAAAAATTTACCCTTGTGCTGCCCATCCCCCCTTTTTTAACAGTCAAAATGGAGTAACAGTACCAAATACATTCTTGTCTTTCATTTTTCGATCTGTAGATACATAGTGTTGCTATGAATGCATTGCCCAAAAAAATGTTTCTCTCAATTTTTTAACTACTTTACCCTGACTTCTCCTATATTTAAAAACAGAAGTGCACCATTTTCAAAAACTATTTGATCTGGGCCATAAGATTAAAGACTATCTAACAGTACAATCTGATTCTGATTAATATATTGTCTTTAAAATCTTTAAGGAGTTTTGTGGTTGAAGCTAGAAGACATCTTGATCACATTCAGTATTCCTTATTCTTTAGGATACTATAAATTTTGCTGCTAGTAACTTTGTTGAAGAGCTTTGTTTTTCAATAAACTCTAAAAAAAAAACTTTAACCATTTGACTTTTTACTATAGACGTTGCTACAATTTTCATTACACTCTTCTTGATTATATGAAAAGTATGTAAATATTTTACCTTTTCTTTTGTTCATGTGTAGATCTTTTGGGGTATGTTTGAAAACCAAGACATCATTGAAAAATAAACTTAGGCCATGGGCTGTTGGGTGCTACATGGATCAGCCAATTTCATATAACTTGTGTTGTCAGCCAATCAAATATTAATACTTCTCCACTTCCTTTCGTATATGCTTATTTTACTACTGATATTCCCCACTGTGTGTCCTGTTTCAATATTTATTTTAACGACAAAGCACAGGTGACGCTGGTC EMBV3_07309 AGTAGAAGTGACCATTGACCCAGCACCTACAGTGTCGATCTCCACCCTCGCCACCTCCAA Gene GeneID:509881|CD300LD:XM_002696191:199_cdna Constitutive 0 NULL GeneID:509881 19 GENE CD300LD NULL CD300 molecule-like family member d EMBV3_40136 GCCTTAACAGACTTCACGTTCATGGTGAAGGTTGTGGATGAGCGAGAATTTTTTGAGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33281 GGTCCGAAACCCAAGCGGCTTCTGCTGCAGGAGTCACCGGCCCAGGACGTCCTGCAGGCG Variant GeneID:525770|CBX7:XM_002687926:145_cdna 247^525 1 EMBV3_09934 GeneID:525770 5 GENE CBX7 NULL chromobox homolog 7 EMBV3_27839 ACTGAACATGATTTTGCAAATGTTTTATAAGGTTCTTTTAAGATAGCTCAGTTGGTGAAG Gene BVV0102_301138 - 1 EMBV3_28432 GK000006.2:87556158-87608785 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07542 ACACTTGCTGACTATGACCATGTGGAAGAGGTTACCAAGGAGGGAGTCAAGAAATCCCCC Gene GeneID:537989|LOC537989:XM_002688377:230_cdna Constitutive 0 NULL GeneID:537989 6 GENE LOC537989 NULL similar to rCG64566 EMBV3_27584 GCAATTGGCAAAGTTCTGAAACTGGTCCCAGAGAAGGACTAAGCAGTTTTCTTGATGTCC Gene GeneID:538724|GSPT2:XM_002700085:179_cdna Constitutive 0 NULL GeneID:538724 X GENE GSPT2 NULL G1 to S phase transition 2 EMBV3_37158 CCTCATACCTACTGTGAGCATATGGGAATTGCTCGTCTAGCCTGTGCTAACATAAGAGTC Gene GeneID:785238|LOC785238:XM_002693324:194_cdna Constitutive 0 NULL GeneID:785238 15 GENE LOC785238 NULL similar to olfactory receptor Olr87 EMBV3_18394 CCAAAGGCCTGGATCTGAGAACTGCATCAGGGACTGGTACAAGCGTAATTTTGCCATCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18521 CATCTGTTGGCTGTGGCTTCTTGGGTAAGTGGCTTTACCGCCTCAGCACTTCATTCCTCA Gene GeneID:539623|LOC539623:XM_002697446:45_cdna Constitutive 0 NULL GeneID:539623 23 GENE LOC539623 NULL similar to olfactory receptor, family 2, subfamily J, member 3 EMBV3_01291 CGTGTCCCCTTACACGAGCTACAGCGTTCAGACCATGGAGACTGTGCCTTACCAGTCCTT Gene GeneID:508750|TBX4:XM_002695606:5_cdna Constitutive 0 NULL GeneID:508750 19 GENE TBX4 NULL T-box 4 EMBV3_27789 TGCAACACCAACGAGTTCTACATGTCCTATCACCTGTTCATCGTGGCCTGTGCTGGAGCT Gene GeneID:516689|GPM6B:NM_001104981:32_cdna UTR3_Alt 2 NULL GeneID:516689 X GENE GPM6B M6b MGC179319 glycoprotein M6B EMBV3_27685 TATTATACTGTATCATCATTTTTATCCCATCCTTTACAAATTACCAAGGTTGGGGCTTCC Gene BVV0101_027653 + 0 NULL GK000002.2:128656643-128710444 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106781 TCONS_00106779 TCONS_00106780 1 XLOC_062890 Coding TCONS_00106781 XLOC_062890 Coding Coding CLIC4 2:128705112-128785887 j TSS78520 6508 1 TCONS_00106781_2 211 0.321911493546404 6 0.919503800727957 1.39275864159335e-06 0.00064777064385004 0.00103557335248956 8.77826428783783e-07 0.000418834999861607 0.00092948357327107 0.00176716467795977 0.00101232560937831 0.00288453496077563 3.59868038675681e-07 0.000128012645798826 0.00024061375888629 0.000338246133584206 0.000958677850622061 0.000194172205464167 0.00792128836071302 0.0114322560735643 0.0159830863449026 0.000499528459174132 0.00211246631564442 0.000522472409037707 0.00537863182369757 0.00452367339565044 3.67208355455785e-07 0.000343171270538239 0.00098250507927099 0.000680320547567884 0.000495612117465444 1.58711267261981e-05 0.000324957075595315 NM_001080218.2 CLIC4 Bos taurus chloride intracellular channel 4 (CLIC4), mRNA. 0.0 1981 99.73 0.16979102642901 NM_013943.2 CLIC4 Homo sapiens chloride intracellular channel 4 (CLIC4), mRNA. 0.0 3642 79.92 0.6319913952059 TCONS_00106781_2 sp|Q9XSA7|CLIC4_BOVIN CLIC4_BOVIN Chloride intracellular channel protein 4; 4e-155 435 100.00 0.995260663507109 0 coding 1 1 1 0 -3.51991269745847 0.00773238903874939 -0.0215653307413037 0.70523454979586 CTCATCCCTCCACGCCTTGGTCAGCTGCATGCCCTCGGCCGAGAGGCCAGTACGGGGCTGTCAGCAGACACTCACCACAGGCTGGCAGTGATGGTGAAAGCATAGGAAACTGCCCCTTTTCCCAGAGGCTCTTCATGATTCTTTGGCTCAAAGGAGTTGTGTTTAGTGTCACAACTGTTGACCTGAAAAGGAAGCCTGCAGACCTGCAGAACTTGGCTCCGGGGACCCACCCACCATTTATAACTTTCAACAATGAGGTCAAAACGGATGTAAATAAGATTGAAGAATTTCTTGAAGAAGTCTTATGCCCCCCCAAGTACTTAAAGCTTTCACCAAAACACCCAGAATCAAATACTGCTGGAATGGACATCTTTGCCAAATTCTCTGCATATATCAAGAATTCCAGGCCAGAGGCTAATGAAGCTTTGGAGCGAGGTCTCTTGAAAACACTGCAGAAACTAGATGAATATCTGAATTCTCCCCTCCCTGATGAAATTGATGAGAATAGTATGGAGGACATTAAGTTTTCCACACGTAAATTTCTGGATGGCAATGAAATGACACTAGCTGACTGCAACCTGCTGCCCAAGCTGCACATTGTCAAGGTGGTGGCAAAAAAATACCGCAACTTCGATATTCCAAAAGGAATGACTGGCATCTGGAGATACCTAACTAATGCCTACAGTAGGGATGAGTTCACCAACACCTGCCCCAGTGATAAGGAGGTTGAAATAGCATACAGTGATGTAGCCAAGAGACTTACCAAATAAAAGAGCACTTATGAGAGAAGCGTCTTCACATCTTCCCCTGACTAAGAACATACTTTCCCTAACAGACTGCTCCTCTTCCTAGAAAGTAGAAACTTTATTTGGCACGAACATGCAGTTATTCCAGATTAGGATAAAGGATAGACAAGGTATAGTAGCTCTCTCGAAATATATATACTCCTAAGCAGTATTATTTTAAAATTCATTTACCCTGCCTATATCCCCTAGCCTGTATCCTCCTCTCCTCCAATTTGGAGACACTCCATCACAAACTTTCACTTTAACGGTAGTTTAAAGGTAGTTTGCCATCTCTCTGGAGCCTTCATCCCTGGAGTCCATTCACTGTGTATCGATGACAGAACTTTTGAGGTGCACTGTTCAACTGTTAAAATAGTAACCGTAAAAAAAATTTAAAAAATAGTAACCGTGACCCCTTCAGTCAGGCCCAAACTGGTGCATAATGCATGGTACAAGGAATATTTATGTATTTTTGGAATTTTATAATATTTAGTAAGAGTATATGAAAGGATTGCTACTGTATCAAAGTATTCTATTTCAGTTTAGTCTATCCTGGATATGTACTAAAGGATGTTACCACCCAAGAAGAGTGCTTTCTACCAAAAGTCAGTGCAGATTTTGTTATTTTACTTTGTACATGGATTTTTACTTTTGCCTAAAAGCATTTTTCTTTCATACTAATGATACTATCTGACACTACTTAGAAGCTGAAAGTTCAGAGGGAAGGATGGTATTTTCAAGATCTTCTCAAGCATATTATGAATATAAGAGAAACCAATGGGCACCTGATACGCTCAGTCTAAATATGTTACTGGTTATATGTATTCTGTCCAGTGCCATTCATTTGGAACATTATTGCTCTCTTCCTATATTGTAAAAGTGCTCTTTTTTAAGGTAAGCATCAGCCTTGCTGTCTGTAGATCTTCTGAGCAACACTATGTACACTGATACTTGGTTCATTTAGCTCTAGCAGTACAATGATTAGTAATGTAAAAGTTAGCCTAAGGAAGATAGCATGGATTTGTCAACATATCAAGTAGAGTTTTGTTTATAAAGCATATTTGATAATCTAAAGAGTGCAGTATAAATCCTATATTAAAAATAAGATTAAACAGGTTATTATTCCATCCCATTTACTGTTAGACTTCAGGCAAGGTATGGTTCACTCCTTTTGGACTAAATTATAGTTGTGATGGTGACTTCATATTTACTGCAGTTTTGCCTAATCTCAATCATTGCATTTCCTTCAATTAAATTTTTCTGAAGCTACATTGAGGAATAGCACTCTGCATGTTTGTTTCTTAAACTGAAGTCCTAAACCAGGAATTTTTTGTGTGGTAACAAGGGAGGATAAACTTGATGAAAATAAAAGTTTGCTAGGTATTTATTCACTTAAAAAAGAAAAAAATGACTTTCTGTGTACTACTCCAAAGACTGGTTGTGACTATAGTAATGTTTTTGGTCATTTTTATACCTAACTTGTTTAAGAAGTGCTATTTCTCATAGGCTGTTTTTGGAAATTTTAAGTATATTTCTTTAAAATAGCAATGTTTTTTTCCTATGATATGCTAACATTTAGTAAACACTGGCTTTATGGAAGGCAGCCTGATTTTTTATAAGCATTGTGCATTTATATAAATCTATCGGTAATTAGCTTGGTGTAGAAAGATAAGAAAAACTCCATATTGTATCCATTTGGCTCAGGGAGATTTCTTTGCTTTACCTTTTTTAGAACTCCTTATTGCTGAACAAAGTTAGGGTACCCACCATTTTGTAATTAAGTATTGGATGATGACTTATCTTGTTCCAGGAAGAAGCACTATCAGGTTATATATTGAGAAATTCTGTGGCAGCAGCTTCCGTGGGTGAATTGCATCACTTGTGCACCAGTACACAGACAGCCGTCTTCACTTTTCACTTACTTTTACCATAGGACCAACTTGGCGTCAGGTGATACTGAATCTTGCCTCATAGCTTAAAGCATAATTCAGGCGAAGCAGGGCGTCTGTTTCAAGTGAATGGTGGACTAAGTGATGCAGAGTAGAGGGCTAATGCGGAAAGAGCTACAGTCCTCAAAACAGGGATGAAGAACACATTCTGAAATTCAGTTGTGAAGAGTTTGCCACTTTGGATATTTATTCTCTTCTTTTTAAAAAATGTACCCCATGATTACACTTGGCTGTCTCTCTAGATATCCAAGGAAGGGGGAGGGTCTATCTGTTATAATTTTGATGAAGGCAGAGTTGTGTTTCTGTAGAAAGACAGATCTTATTACTTTATCAGGAAAGTTAGATGAGATTGAGATTGAGATTGGCAAATGGACAAAAGCTAGTAAAAAAAGATGACCCTAGAACATACCTTTTTAACCCCATCTTACATTTGTGGAAAATCATAGCTTACAGTCTTGGGAAATTTGGGACATGAAAAGTTTTCATGGTAGTTCATGTAGTGTATGGGTTGATGTAATAGAATAGTCTGATATTATTCTACAACTACTGAATCATTCTCCCTTCATTTAAACCCCTTTGTTTCACTTAAACAAGATAAGAGTCTGAATGGAAGATCTTGTAGTTTCCAAGGGATTCTGAGAAATTTTTGTGTTCAACATTTGGAAGGCTGTCTACTATTTCAGTTGATATAACTTCTCCCTTTAAAAAAAAATATAGATGTGGATTTTCTGTATAGTTCTGTTATTTCCTTTTACCAAGATTGTTGACTTTTGTGATAAAATTCATACAAGATTTTATTTCTTGGTAACTTTGGCTTATACAACTATCTTTAAACCCTTGAGCAATCTGTATACAATGAAGAGGTTTCTGACATTTATTCTTACACTCATTTGTTTGACTTTAGAATTTAGGCACATTTACTTCTGTTGTTTTGAATCTCTTTAGAGCTGCGTGTAGATAGCTTTTATTTCTGTGCATTTAAAATAATCCATTTAGAAAATATCTACATGGTAAAAATGAGAAGAAATAGAAATGTATTTTTTCATGAACATTTTGATACACATTTCATCAAATTTATTGATTAACCAATTTCTTACACTGGTTATAATCAGTATTTGATTCAGAGAGAGAGAAACATTCATTATTATACTGTATCATCATTTTTATCCCATCCTTTACAAATTACCAAGGTTGGGGCTTTCAAAATTATACTTTTATTATGGAAAAAAATTTCAGCTACCCCAAATCATAAACTTGAACAGAATTGAAGCATTTTTTTTAATTACTTGAAAAGGAAAATGAAAGCTTATTGTAGAATGCTTGTATTTTCTTTTCTCTCTCTGGAACCAGTATATTGCTGGCAGCTATTGTATTAAAAAATAAAATATATTTTCACTATCATAAAAGGTTCTTTTTTCCCCCTCTCATGAAAATAAATAACAATTTGGGGTAAAAGTGTTTATTTGAGACTATCTTTTGTTTTTCTTGAGGGGGCAGTTCAGTACATTTAATAGATTAAAGGGGAAAACCATACGATCATCTCAGTAGGTACATAAAAAATAACTTACAAAAACTTTCACGGTACCCATTCTTAGCAAAACGGGATCAAAGGTTAACTTTTTTTTAACCCAATAAAGACATCTGCCAAAAACCTACAGCAAATTTCATAAATAAATGTGAAACAAGCCCTCATTAAAGTCAGAAGCAAAATACGATTGCCTTCTATCACAGCCATTACTCAGCTATTTTACATAACTACTGTATTCGAGGTATCCTATACCAATGCAGTAAAATCAGTAAAAGAAATAAGGAGTGGAAAAAGATGGACCAAGTGACTTCTCCTTTGTAGATGATACATATATAAAAAAGATGTGAGAGTTGGACTGTGAAGAAGGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTAAAGGAGATCAGCCCTGGGATTTCTTTGGAAGCAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGTGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTTTTCTATCAGAGGAAATTGGGGAGGGATTGGGGGCAAGAGGAGAAGGGGACAACAGAGGATGAGATGGCTGGATGGCATCACTGACTTGATGGATGTGAGTCTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCGATTCATGGGGTCGAAAAGAGTCGGACACGACCGAGCGACTGATCTGATCTGATTAGAAATAATAAAATTCAATTGCTTACTAGATACAAGATTGAACTATATACTAACATTAACCACATTAAAAATAAATAGATAACATTCATTTCTTCTAGAAGAAAACTGGGTGACAGAAAAATGGATGAAAATTGTCAGTGTTACTTTTTTGAGCTTTTGGAAATTTGTACCATAAATACATTACCTATTCTTTTTAAAAAGTACTTTAAAAGATCATCTCTAAGGTATTTGGGATAAAACCTGATAAAGTATGTGCAATTCCTTGATGGAGAAAAGTACAAAATATTATTAAAGAACCTAAAAGAAACCTACTCAATGGATAGGTATACCATGTTTGTGGATGGAGAATGTAAAAGTTATAAGAATTTCATTTGTTTTAAGTAATTTATAAATTCAATATATTTTCCCAACAAAATCCCAAGAGGGTTTTTTTTGGGGGGGTGGGGCGGGACACAGATAAATGGATTTAAAATATAAATGTGGAAGAAGGATGCTCCCCAAATAGCCAACATATATCTGGAAGGAGAGGGAAAGAAAAGAAACTTGCTTGACAGGATATAAAGTCTTAAAAGCTTAATATAATTGATGAGTAGGATATATTAGGTCACATCAACACAACACTCCTGCTGCAACTACCAGAAAAAACTGGTTTAAAATACCAAAAATTCAATACTGCTTTTAAACATCAGAAAACTGTGGAAGCAATGACTAAATGAATTGGATTTCAGAAGAGGACGCCTTTCTGAGGTAAACTGATGGTCTGGCCATTTTTTCCTTAGGGAGTATTTGCTGATTCTGGGCCAGGAACTGAAGATTGGGTTTAGCCCATGCAGAGGGGCACTTCTGGGTAAAAGAAAACACAAGGTCCTTGGTGACGACATACTGGAAACCTGAGACACCTTAAATAAGTGGTTGGCTTTCTCCCAGGACATTTGCTGAATTCCAGAGCTCTACGTGACATGCCAGAAGCTAAGCCCAGGGCCACCAAAAGGCAGAGTGAAACGTCCCACAATGACACAATACTTAGACAAAATTGCATTAAAAGGTGGGCTTACCTGAAACAGCAGCGGTAACTTAGTGGTTGCCTGTTACTAGGGTTGGAGTTCACGAAGAGTCAGACATGACTGAGCGAGTGAACAACAGGGTTGGGAGTGGGAATTGACCGCAAACGGACATGAGAGGTCTGTTTTAAATACAGGTTGTAGATAAGGGTCTAGTATCCAGAATATATAAAGAATTGTTAAAACTCAATAATAAAAACACAACCCAGCTGGGGACTTTGCTGGCGGTCCAGTGGTTAGGACTCTGCATCCACTGCATCGGGCATGGATTCAGTCCCTGGTGAGGGAACTTAAGATCCCTGCATGCCATGGTGTGTGGCCAGACAAAACCCCACAACCCAACCAAAAAATGAACCAGGGTTTAGATATGTATTTCTCCAAAGAAGATCTACAGAGGACCAATCAAC EMBV3_19103 CTGGAAAGGCTGGGAGGGGGGGCTGCAAGTCCAATTAATGACATTTCCATTCACAATCTT Gene GeneID:523110|NSG1:NM_001077957:13_cdna Constitutive 1 NULL GeneID:523110 6 GENE NSG1 D4S234E neuron specific gene family member 1 EMBV3_29768 GACGGTCATGGAGGATAAGATCAATGCCCTCATTAAAGCAGCCGGTGTAAATGTTGAGCC Gene GeneID:100295775|LOC100295775:XM_002694128:483_cdna Constitutive 0 NULL GeneID:100295775 16 GENE LOC100295775 NULL similar to ribosomal protein P1 EMBV3_21503 ATGACTGCTCTTTCGGCAGGGTCCAAGACACTCCCATTTCCTCCGGGGCCACCTCCACCT Gene BVV0102_268648 - 1 EMBV3_25240 GK000014.2:2031477-2054916 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08419 GCCCTGAGCATCAGCTTGTTTCTCTTAAATCTGGCCTTCTTCCTCAATGTGGGGCAACGC Gene BVT0102_082864 - 1 EMBV3_02819 GK000018.2:25723494-25761282 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082702 TCONS_00082701 TCONS_00082700 TCONS_00082703 1 XLOC_051084 Coding TCONS_00082701 XLOC_051084 Coding Coding - 18:25744496-25756380 - TSS62334 3492 1 TCONS_00082701_3 192 0.234249713631157 8 0.706808045106455 1.24897760125406e-16 1.13021711982008e-10 0.00069392159023856 0.000524804182779957 8.88355968685049e-05 5.12163506883714e-05 0.000256345934565509 4.13084850140105e-05 0.000672958154799302 2.35600098556694e-14 6.94310469022699e-20 1.72552448059123e-10 3.04006836946394e-05 2.02608687303086e-05 3.33346164920731e-05 0 0 0 0.000250947881835354 4.9608856649023e-05 5.41127191622109e-18 2.75579873238406e-17 4.47188206545832e-10 1.14867808129876e-14 9.45804134598996e-05 9.81291023077447e-05 2.13457762031265e-16 2.15928692356135e-11 6.55969945686301e-13 2.75525375520555e-12 XM_005218809.1 GPR97 PREDICTED: Bos taurus G protein-coupled receptor 97 (GPR97), mRNA. 0.0 2554 100.00 0.405211912943872 NM_170776.4 GPR97 Homo sapiens G protein-coupled receptor 97 (GPR97), mRNA. 0.0 771 71.92 0.424971363115693 TCONS_00082701_3 sp|Q8R0T6|GPR97_MOUSE GPR97_MOUSE Probable G-protein coupled receptor 97; 4e-87 270 68.23 0.994791666666667 1 coding 1 1 1 1 0.0557480871476321 0.657897108879777 0.0393106167286931 0.620910114773531 GGGGCTCCCTGCTCAGCCGGGAGGACGGCAGCAGAGTGTTGAACAATCGCATAGTGGGCTTGACTCTGGGTCACATAAACGTCACCGAACTGGCTGAGCCTTTGGAGATCACCTTCTCCCACCAGTACCAGCCCCCCAACATGAACCTCAGCTGTGAATTCTGGGATGCGACTAAAGGAGACTGGTCTTCCAAGGGCTGCTCCACAGAGGTCGGAGTCCGCAGGACTGTCTGCCGCTGTGACCACCTGACCTTCTTCGCCCTGCTGCTGGTTCTCCCGGCAGAGGTTCAAGTCTGAAGACGCCCCCAAGATCCATGTGGCCCTGAGCATCAGCTTGTTTCTCTTAAATCTGGCCTTCTTCCTCAATGTGGGGCAACGCCTGAAGGGGTCCAACGCTGCCTGCTGGGCCCGGGGGGCCGTCTTCCACTACTTCCTGCTCTGTGCCTTCACCTGGATGGGCCTGGAAGCCTTCCACCTCTACCTGCTTGTCATCAAGGTCTTTAACACCTACTTCAGCCACTACTTTCTGAAGCTGAGCCTTATGGGCTGGGTCCTGCCTGCCCTAATAGTCATCGGTACTGGGATCGCCAACAGCTACGGCCCCTACTGCATCCGTGATGAGAAGAACGTCATCACACTGGAGCTGTGCTGGTTCCGTGAGAAAACTGCCCTCTACGTCACCGTGTACGGCTACTGCCTCATCATTTTCCTCTTCAGCGCGGTGATCCTGAGCCTGGTGTCCTGGAAAATCTTTACTCTGTCGAGTGCCACAGCGGGCAAGGAGAAGGGGCAGCACTGGAAGGGGGTCCTCACCCTGCTGGGCCTCTCGTGCCTGGTGGGCCTGCCGTGGGGACTGGCCCTCCTCACGTCCCTGGGCCAATTCACGGCCTATGTCTTTGCACTGTTCACCTCTCTGCAAGGTGTCTTCATCTTCTGCTGGTTCATTGTCCTCTACTGCCCAAGCCAGAGCACCGTGACCTCATCTTCTGGCACTGCCCGGGTTGACCATGCCCAGACCGTGTCTCATGAATAGAGGAAGGCCATGTGGCCAGGCCGGGCCCGCCCTGCACTCTGGACTCAGCTCTAATTCGCCGTGTGACCTGGGGGTGGCGGGGAGGGGGTGCCTGCCTCCTGGGCCTCAGCGCCTTTCTCCGCACAATGTGACTGGGGAGCCAGGGGATGGGAAATATGTTGGGCCATGTTGTCTCAAAGGTCTTATTCAGATACACCTACGGGTCTGAGAGTTCACAGATCCAGGACGGCAAGAGTCTCAAGTCCCTGTGATCCTGAGACCCCTGCCGGTACAAAGTGACACCCTCACCCTGCCCCCACACCCACCACCCGCCCTCAGAGCAAAACGGCCTTCTAGTCTCAGAAAGCCTGAGTTCCAATAAGGAGGTCGGTCCTTGCCAGTTGCTCCCCTTCCTCCCTTCCCCTCATCACTGCCCTCCCACAGCTCCATCCTTGGGCCGCCTGTACCTGAGGGGACACTCAGGGCCACCGCCCGCTCAGGCGTGGGGGGCTCTTGTGAACTGGAGGTTTGTTTTGAGGGGGTGGGGGGGTTGCTCCTCCTCTGGTCTCACCTGGTCTCAGCCACTCTCTCCAGGGCCCATCGTCACAGAGGTCCCCTTGCCGCTCAGGGGCGCTGGGAGCCCCTCAGGTGCTGGGGACCCTGAATATCAAGAAATGCCACTTACTCAATAGGTGGGCTACCTCAAGCAGTCCCCAGTTCCACCTCTGACTGCCTCACGGGTGGCCCTGATACCGACCAGGGTCCTTGGCCTTTCTCAATCAACAGACATTGATGGGAGGCCAGACGAGAAATTCAGGCAAGGCTTTATTGGGGCCCCTGCTGCAGAAGGGGAAAGTGAGAATTAACAACAGGTTGCCTTGCTTGCTCACTCCCTGAGGGCAGGGGTGGTGAAGCCGATTCCTTTCATGGGGTGAGGGTAGGGATATGTCCAGGGGTTTGGCTGGAAGCCTAGCTTAGGTGGTTTGCCCATCCTTCTGGTGGTGCTGAGTACAGGGGGCATGCACAGTACCCAGCTTTTTTCCCTCAACACCCTGTTTTTATTCCTGGCTCTTCAGAAGTGGCATTAGGGACTTTTTTAGTTTTTTGTTTTGTTTTGTTTCTTTTGTCCAGAATTGGCCCAACTGCACATGCACGCAGTTATTTCTAGTCCCATATAGCTTCTCTGCATTTTGTTGCTGGAGAAGAGGTCTGCCCAGGTTGCAAACATTGCAGCAAAGGGTCCCAGGTCCCAGCAGGTCTCAGGTGGACTGACCTCTGACCTGCTGTCTTGGTGGGGGTGGAGGGCATAAGGTTCAGGGCTCAGCACACCTGAGGGCTGAGGAGCCAGTGCGGGGGGAGGGGGTTGTGAACAGAGAGAGGATGGACATTTCTTCTGGCATCCAAGCTCCCATAGTGCCAGGGGAGTGCCTCAGGCCAGACCCAGCTGGGTTTGTCACTTCCAGTGGCTGGGCTTGGTTTTGAAACCACTGGTTTCCTCAGTAGGAAACAAAAAAGAGGCAGAGACAGTAGAGATAGACACGGATATAGAGAGATGGAGAGATAGAGAGAGACAGAAAGATAAACCGAAAGAAAGATGAACAGATAAACTGACCCAAAGAAAGAAAACAAAAGGAGAGATAGACAAATGCAGGGACACGCTGGCCTCCTGGGCCGGCCCGACCAGGAGGGCAGGGCGCTGGCGTCCACCCCTCTCTTCTGCCCTACACTGCACCTCACCCAACTTACTGTTCAGCCTCACTCTTCAACCCCCACCCTCCCCAGTGTGCTTTGCAGAAAGTCTAGCACCTTCCGCAGGTGAGAAGTTATTATTATTAGAGCCTCACTACAACCCCTGGCTGCCAGTCAATTTGCTCCCCACAAATGCCCTGGACTTGGATTTCCCTTCTCCCTCCTCCCACTCAGCAAACAGATGAAAGAAAGGAAGCCCAGGACCCTGGCTTTATGCAAATCACTGTGTTCCTAGAAGGGAAATCTTAAGAGTGTGGACACTGCAACAGTTGAGCCACGTTATCAGTTTTTGGGGACAAACTTGGTGGGTTTCAGGGCTTATCTTCATAGACATCTGTTTCTCACACTGAAGTTCTCAGCAACCTTACCCCAAAGTCTCAGAGCTAGTAACCTGTCCTCAGGAAGAATGGCTGCTTCAGTGTCTGACAGGCCTGGCTTCAAATCCTAGCTCTGCTATTTAGAGGCTGGGTGACCCTGAGCCTGTCACCACACCTCTCTGAACCTCAGATTCACCCTACGTAAGATGGGGCTTGTTGAGTCTTATGTGTGCACGCTCAGTTGCTCAGTCATGTCCACCTTTTTGCGACCCCATGGACTACAGCCTGCCAGGCTTCTTGGTCTATGGGATTTTCCAGGCAAGAATACTGAAGTGGGTTGCCATTTCCTACTCCAGGGGATCTTCCCAACCCAGGGATCGAACCTGGGTCTCCTACTTTGGCAGGTGAATTTTTT TCONS_00082704 s 5' 4903 TCONS_00082704 s 5' 16786 EMBV3_10950 CTTCAGGCCAACATGGTCAACTTGTTCCTGTCATCAATGTGACTGCTCACCTGTTACTGG Gene GeneID:505138|CASP8AP2:XM_002690191:27_cdna Constitutive 0 NULL GeneID:505138 9 GENE CASP8AP2 NULL caspase 8 associated protein 2 EMBV3_23484 CTGTGGCTGTGGACCTGTTCCCTCAGACCCTGCATTGTGAGATGCTCATTCTGTTTGAGA Gene GeneID:281834|HTF9C:XM_002694658:187_cdna Constitutive 0 NULL GeneID:281834 17 GENE HTF9C MARC_4147-4148:996679430:1 HpaII tiny fragments locus 9C EMBV3_36184 TTCAGAGGATCAGCCCGCCCCTCAGTGGAGTCAGGAACAGCAGAGTAAGAGTGAGGCTTT Gene GeneID:790139|LILRB3:XM_002695423:85_cdna Constitutive 0 NULL GeneID:790139 18 GENE LILRB3 NULL leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 EMBV3_01946 ATTGTTCAGCCAATTATCAGCAAACTCTATGGAAGTGCAGCCCCACCCCGAACCTGTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19471 TGTGGGGTCATCTGGCCGTGTACCTTCCCTCTCGGTTGGTTGTATTTCCAGATTGGATAC Gene GeneID:617293|ELOVL5:NM_001046597:362_cdna UTR3_Alt 2 NULL GeneID:617293 23 GENE ELOVL5 MGC128086 ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) EMBV3_32175 CCTCTGGGGCTATGGAGGCCCCTGAGCCTGTGTTCCTACCTTCACTGTGATCCCTGAAGG Variant GeneID:509187|INO80B:NM_001105347:11_cdna 65^257 1 EMBV3_34048 GeneID:509187 11 GENE INO80B ZNHIT4 INO80 complex subunit B EMBV3_42226 CGCTGCTGGTCCTGCGACTGCTTCTCGCTGAGGCCAAGTGAGGTTGGTGCAGGGAGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26508 AACAGTTAAGAGTTGTGTGGGTTGGCTGTAGGAAGGGGGAAGGTGGAGTCTTCTGTGTCC Gene GeneID:100125928|HIG2:NM_001105498:113_cdna Constitutive 0 NULL GeneID:100125928 4 GENE HIG2 MGC166401 hypoxia-inducible protein 2 EMBV3_41007 GTGTACTCCAGCATCGAAACCTCAAGGTAACTGACATCATTCTGTGAAACCCGAAGGGCC Gene BVT0102_082795 + 0 NULL GK000003.2:118227978-118273222 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02229 TAGGAACTGTCAGCATGTTGTTGAAGTGTGGAGTTGTAACTCTGCGTGGACTACGGACAG Gene GeneID:326597|CALM:NM_001166508:106_cdna Constitutive 0 NULL GeneID:326597 20 GENE CALM CALM2 calmodulin-like EMBV3_04741 TTTGAAATAAGGCATCCTGAGTAAATTTGGCAGCAAGTTCTCTTACTCTTATCAGTGGTA Gene GeneID:515119|RMP:NM_001035305:243_cdna Constitutive 0 NULL GeneID:515119 18 GENE RMP MGC128688 RNA polymerase II, subunit 5-mediating protein EMBV3_03879 AGACGTCCAAGTTCTACTCTCAGCTCGTAGTGCTGCTGGCCCTGGCGGCCTGGCTGCAGC Variant GeneID:100125314|ALG12:NM_001103346:2_cdna 519^692 1 EMBV3_12854 GeneID:100125314 5 GENE ALG12 MGC159951 asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae) EMBV3_16851 TCCAGTCAGAGCTCCCTGGCTCAGGAGGAAGAAGAGGAAGACCAAGGAAGAACCAGAAAA Gene GeneID:777788|DDIT3:NM_001078163:88_cdna Constitutive 2 NULL GeneID:777788 5 GENE DDIT3 MGC152049 DNA-damage-inducible transcript 3 EMBV3_33211 TCTTTGGGGCCTACACTCTCCCCACCTTCAAGTTCCAGCCTCGCCGTGAGAGTGTGGACT Gene GeneID:100337454|LOC100337454:XM_002685079:219_cdna Constitutive 0 NULL GeneID:100337454 1 GENE LOC100337454 NULL hypothetical protein LOC100337454 EMBV3_33455 TGCTGTTGCCACCTCTGCTGCAAAACCAAGAAGCCAGACTATCCCCCAATCCCCACCTTT Gene GeneID:282101|TRPC2:NM_174477:128_cdna Constitutive 1 NULL GeneID:282101 15 GENE TRPC2 NULL transient receptor potential channel 2 EMBV3_09877 GTACCAAAGTCATCTGTCAAATATTCCCCGACCCACTCCTGTTGCTGATGCAGTTGGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08246 GTTGCTTATGCTCAAACCCCTTCGGAAGACAGTCAGAAATGGCATTAGGGATGATGGAAG Gene BVV0101_030664 + 0 NULL GK000016.2:47966685-47968521 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069438 1 XLOC_041945 Coding TCONS_00069438 XLOC_041945 Coding Coding RNF207 16:47967555-47985490 = TSS51770 4055 1 TCONS_00069438_5 556 0.05154130702836 18 0.774896843983495 0.00133540378958349 0.000433655945735084 0.000851230933634052 0.000157686854227795 0.000166804074739194 0.000155255696663848 0.000342279825614062 0.000274221837330887 0.000169282804018066 0.00038557515743552 9.82290539860766e-05 0.00012433345361117 4.38707366057485e-05 0.000100924348898932 0.000120276313137425 0.00136128830622208 0.000159676663306614 0.000402196750150382 0.0017949435239374 0.00226650143635767 0.00158636249298223 0.000200690465967426 0.000395921729867378 0.000682161976008836 0.00134127052151201 0.00212667111756915 0.00101722247280244 0.000236872381301977 0.000171198171912981 0.000283191178843564 NM_001078057.1 RNF207 Bos taurus ring finger protein 207 (RNF207), mRNA. 0.0 5544 99.81 0.761528976572133 NM_207396.2 RNF207 Homo sapiens ring finger protein 207 (RNF207), mRNA. 0.0 1009 87.91 0.197533908754624 TCONS_00069438_5 sp|A0JNG4|RN207_BOVIN RN207_BOVIN RING finger protein 207; 0.0 1133 99.46 0.998201438848921 1 coding 0 0 0 0 0.0121652835017944 0.912939544635086 0.0697223614101571 0.18556584521276 AGAGCCAGCCTGGCCGAGGGGCCATACATGGCTGAGGAGCCCGCAGCCAGGGCCCTCGGGCCCCGCTCTGTGCGGCGCTCCGGCGACTCTGGGCTCGGGGCTCTGTCATCCCGGGCGGGATCCAGTCCAAGTTTCGAACCCTAGCCCCACGGAGTCGTTTCCAGCCGCGCGTTCCCGCCACACTCCTCCTCCGGGCGTGGAGTACAGTGGCCGTGGCCGTGGCTGTGACCAGGGCCCTGGGTCAGAGCGGCGGAGGAGCTCGGAGTTCATTCGGTGCAGACCCTCGCGGCGAGGCAGCAGCCGCCGGCCTGGGAAAGGGGCCGCCTTGGAGAAGTGGGAGGACGCACAGGATCTGGCCTCTATGCGCGCCTCCTGCCCATCCTCCCCGCCCCGGCGCGCTAGCCCCCAGCCCCGAGCCCTAGCTGCTCCGCCCTCCGCGATCTCTGGACGCCGCCAAGGGTCCGGGCCGGACAGATGTCGGGAGCTATCTTCACGTCTCTGGAGGGCCCGGGCGCCCTGGACGGGACAAGCGGCCACCCCCTCGTGTGCCCGCTGTGCCACGCGCAGTATGAGCGCCCCTGCCTGCTGGACTGCTTTCACGAGTTCTGTGCCGGCTGCCTGCGTGGCCGCGCTGCTGATGGCCGCCTCGCCTGCCCTCTGTGCCAGCACCAGACGGTGGTGAAGGGCCCCAGCGGGCTCCCTCCAGTGGATCGGCTGTTGCAGTTCCTGGTGGACAGCTCAGGGGATGGCACCGAGGTGGTGCGCTGCGCCAACTGCGACCTGGAGTGCGGCAAGCAGGACGCGGAGACCACGTACTTCTGCAACACGTGCGGGCAGCCGCTCTGCGCGCGCTGCCGCGACGAGACGCACCGGGCACGCATGTTCGCGCGCCACGACATCGTGGCCTTAGGTCAGCGCAGCCGCGACGTGCTCCAGAAGTGCACGCTGCACGCCGAGCCCTATGTCCTGTTCTCCACCGACAAGAAGTCGCTGCTGTGCATCCGCTGCTTCCGGGACATGCAGGGGGAGAGCCGCGTCCACTGCGTGGACCTCGAGTCAGCTTACGTCCAGGGCTGCGAGAGGCTGCAGCAGGCGGTGCTGGAGGTGAAGGCCCTGCAGACCGCCACACGAGTGAAGGGCGAGCTGCTGCAGGCGATGGTGGAGGAAGTGCGACGCAGCGCGGCAGAGGAGGAGGCCGCCATCCAGGCCCTCTTCAGCAGCATGCAGGACAAACTGTCAGAGAGGAAAGCGCTGCTGCTGCAGGCCGTGCAGAGCTTGGCCAACAAGGCCGAGTTCCTGGACCTGGGCTATGAGCTGATGGAGAGATTGCAGGGCATCGTCACGCGGCCACATCGCCTGCGGCCGGCACAGAGCAGCAAGATCACCAGCGACCACCGCGCTGAGTTCGCGCGCTGCCTGGAGCCGCTACTGCTGCTGGGGCCACGCCGGGCGGCGGGTGCCGGGGGTGGCACTAGCACGCTCACAGGGGGCTTGGGCCCCAAGGTGCTGAGGGGGCCCGGCTGCCCTTCCCCAGTGGGGAAGATGTTGGGGTCACCGGTCCAAAAGCCCACACTGCACCGGTCCATCAGTACCAAGGTGCTGCTGGCGGAGGGCGACGCCTCACCCTTCACGGAGCACTGCCGCCACTACGAGGACTCCTACCGGCGCCTGCAAGCAGAGATGCAGAACCTGAAGGACCAGGTACAGGAGCTGCACCGGGACCTCACCAAGCACCATTCGCTCATCAAAGCCGAGATCATGGGCGACATCTTACACAAGGCCCTGCAGGTGGACGCCCAGATTGCCTCGGAGTATGCTTCCGTGGAGGGCCTGAGAGCAGTCTTTCAGGAGATTTGGGAGGACTCCTACCAGCGGGTGGCTAACGAACAGGAGATATATGAAGCCCAGCTCCATGACCTTCTCCAGCTGAAGCAGGAGAATGCCTACCTGACCACCATCACCAAGCAAATCACGCCCTACATCCGCTCCATTGCCAAGGTGAAGGAGCGACTGGAACCCAGGTTTCAGGTCCCTGTGGATGAACCATCAGACCATCCACAAAACACGCATGATGATGGTGTGAATGCCGAGGCTCCGGCCAGAGTCTCCACTTTGAAACCTGCGATGGAAAAAGAAGTCTCCTGACGGTTTCTTAATTGGAGGGAACTGGCGATGTGGCCCTTACCCAAAGAAAAGCTTTCAGGAATACCCAAAAGCCTGTACCTCATTAACCTGATTCTCCTCCCTGCATGCTGGCACTGCTAAATTTATGGAGTTAAAAATAACCTGAAGATCTCAGTGCTAGATGAACGTCGATCGCTTGCCAAAGCCTGTCCCAAAGCGGTTCATCTCTGATCCCTAAGTAATTGCTAATTTCCGCCCTGGGGGACAAAGCAGGGCAGAACGTCCTGTCAAGCCTGGGTGGGTGGTGTGACAGCATCTCCCTGGGACACCAGGGCCGGCCTCCTGAGCCCCGGGCCTGGCAGGCAGGTGGAGGAGGGACACACAGTCAGAGGCCAGCGCCTTCAGTCTTACAGTCCATAAAGCCAGGCGTTATTAGCGGCTCTCCGTGTGCTGAAGACAGCCTCACGGCCCCCAGTGTTGAGGAAAGCTGGCTCCTATCTGGCTAGCGCAGCAAGAACTTTGCCTCGGAGAGTGGGGGCCACTGCCAAAGCTGCAGCCACACCCGCCTCCATCCTGCAGTCCTACTAAGTGGGTTGACTTTGCAGAGCGTGGCCTGGGGAACAAGTTTAGGACTGATTCAATCCCCACACACACTAAGTGCATCTGACGTCCCACCAGGCAGCATTCCCGCCAGAGGAACCTACCGCCTTGAGGCTGCCACCTGGGCTGTCGGCGGGCAAGACCTCAGGAGGCCGAGACTGGACTCAGTCGGGTCCTCCCTCCAGCAAGTGTCACACCTCTTGCCGACGAACCCGTACACCTCTTTGGTATATATAATCATGAAAACACTAATTCGGCCAGGAAATCTAGAAATAAATGGCATTTTGAGTTGGTAAGATGCTTTTTTGAACACACGTTTCCGGTATCTGGTACAATAAATCCGACGTCCAGTTTTGTGTAACTCACGCGGTACTGGTTTTGTCCTCTCTCTTACCAAAGTGTTAAAAACATTTGACATCGTTCTTCCAAGTCTTCACAACACCCCTGTGAGGTAGGTGGTATGGACCCATTCTACAGATGGGGAGGTCTAGGCACGGAAAGGTTTAGTGACTCCTTGAAAGCCAGGTGGCGTGGTGTAGCAGCGCTCCAGCCAGGCGCTGACGCTGCCTTCGATCCACGCTCCAAGGGCGCCACCGCAGGGCTTCATGGACAGAAGTCACACTGAGACCAAGTTCCTCTCTCTAATCCAGAATTCAACAAGTGCCTCAGAGCTCATATGTCTGACTCGTAAAGCCAACCACTCTCCCCAAACTTGAAAAACAAAAGTAGTGACTAAATCTCAGCTCTATTTTTTTCATGAGTCAACTTGCTGGAAATTTATAGTTGCTTATGCTCAAACCCCTTCGGAAGACAGTCTGAAATGGCATTAGGGATGATGGAAGTTTGAGAACAGACCATAGGAATCAATGGTTAATACATTTAAGTCAAAACACAAAAATATAAGCTATGGTAAAATAAGAAGAAACCCCAAATAAACAGAGAGCAGTATTTCTCAATGTTTGACAGTGCCTTGCACAGAGCAGGTGTCCAGGAAGCATTTCTTGGATAAAGGACGAATGACCCATCTTTGACATGCCTGTCACTGGTAACGCCAGGCCCTTTTGGAAGGAGAGCAGGCGCCAGGACCCTAGGAAAGCCACAGGGGCCCACTGTCTCCCTGGCGCGGAGAGCCTTGGTAACCTGAAGCCTCAGCCAGGACTGGGGGCATCCATGCTGCCTTTCTGCCGAATAAAGGGTGAGGCTCATACACTGTGTTAAGTCCACTTTGAGTTTATACTGCTATTTTTAAAAAATAGGTAAGTAAATAGGATGAGATATGTGAGGAACCGAAGGAAGCATCTTAAACTGTAGAGAAGCTCACGCATGTAGGN EMBV3_29879 ATGCATGTTGGAAACCACAGTAGGTAGGAGAGAGAATTTAGTAGGCTAGGGCTAACAGCC Gene BVT0102_084481 + 0 NULL GK000004.2:105837063-105842747 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182689 TCONS_00182683 TCONS_00182691 TCONS_00182692 TCONS_00182685 TCONS_00182693 TCONS_00182696 TCONS_00182682 TCONS_00182688 TCONS_00182695 TCONS_00182690 1 XLOC_110923 Coding TCONS_00182693 XLOC_110923 Coding Coding WEE2 4:105810828-105838511 j TSS136465 3055 1 TCONS_00182693_3 483 9 0.889964597933675 0.0398466082489175 0.0608951650493912 0.0426620283772323 0.0201311213570504 0.0375776251903045 0.00946209554282354 0.0159991900746346 0.0120881532607049 0.0169751371652689 1.35552160381602e-269 0.000108114293229083 6.55616851506318e-76 5.14838472544318e-31 0.005598423185814 0.000324390881753827 3.86504285698844e-117 3.54668918877182e-154 2.60064230627595e-88 0.0472553238231617 0.0631486726144725 0.0139989560675315 1.39141563256316e-39 1.60259465885875e-56 9.28059005474307e-188 0.0797294782432045 0.0765972728445849 0.0266852783004115 7.20278602245312e-05 3.51113107760741e-98 2.61769641193961e-25 XM_598279.4 WEE2 PREDICTED: Bos taurus WEE1 homolog 2 (S. pombe) (WEE2), mRNA. 0.0 3521 99.90 0.640589198036007 NM_001105558.1 WEE2 Homo sapiens WEE1 homolog 2 (S. pombe) (WEE2), mRNA. 0.0 1189 84.01 0.359410801963993 TCONS_00182693_3 sp|P0C1S8|WEE2_HUMAN WEE2_HUMAN Wee1-like protein kinase 2; 0.0 623 60.53 0.997929606625259 2 coding 1 1 1 1 -0.0635522649771734 0.647706788047731 -0.148657483687292 0.0410686976453516 ACGGCATGTCTCTGTGTAGCTGTTAGTTGGCCGAAGAAAAGCAGGGCTGGAACTGGGGAACGTGTCAGCTTACATTCTCTCTCCTCCTTGTTTCAGTAGCTCTGTTTCCTTCTGCTAGGCCTTCTTGCCCAGGTGGTAAAGCTCTTTGGCTGAGATGGGTGACCACAATGAGAACAAAGAACTGAAGCAGAAGTTAAACTTTTCCTGTTGTGAAGAGGAGCATGAGAACAAGGGGCAGGAGGAAGCACAGGAGAGCGAGGAGGCCCAGACTCAAACCCCAGAGAGGCCTAGAGGTCAGGATTCAGAGGTGAAGCTCACACCTCCCAGGACGCCCCTTGGTAACGAATATGACCTCAGCGCACTTTACGAAAGAGACCAAGCGAGTCCAGATCAGGGTCTCAGGACTCCAGTGTCACACTCCCTCGCACGCCCTGAAACACCACCAGCCCCACCAGACAAGAGCGGGCCGTCACACTGCGAGAGCCCCTTCACTCCCAAAAGATGTGTCTTACGAGAAACCAACATGGCTTCCCGCTATGAAAAAGAATTCTTGGAGGTAGAAAAAATTGGGGTCGGGGACTTTGGTACAGTCTACAAGTGCATTAAGAGGCTGGATGGATGTGTTTATGCAATAAAACGCTCCACGAAACCTTTGGGAGGATTATCAGATGAGACTCTGGCTATGCATGAAGTTTATGCCCATGCGGTGCTGGGACAACACCCCCATGTGGTGCGTTACTACTCTGCGTGGGCAGAAGATGACTACATGATCATTCAAAATGAATACTGCAATGGTGGGAGCTTGCAGGCTGCAGTAACTGAAAACACAAAGTCTGGCAGTCATTTCCCAGAGCCCAGACTCAAGGACATCCTTCTACAGATTTCCCTCGGGCTCAAATACATCCACAGCTCCGGCATGGTGCACCTGGACATCAAGCCCAGTAACATCTTCATTTGTCATAAGATGCAAAGCGACTCCCCCGTAGTCCTGGAAGAGGCTGAAAATGAAGCTGATTGGTTTTTCTCTGCTGATGTGATGTATAAAATTGGTGACTTGGGTCATGTGACATCAATAAGCAATCCCAAAGTGGAAGAGGGGGACAGTCGCTTCTTGGCTAATGAAATTTTGCAAGAGAATTATCAGCACCTCCCCAAAGCAGACATATTTGCCTTGGGGTTGACCATCGCGGTGGCTGCAGGAGCAGAGCTGTTGCCCACCAACGGCACCGAGTGGCATCATATTCGTGAGGGGAACCTTCCAGACATTCCTCAGGAGCTCTCCAAGGAATTCCACCAACTACTCGAGAGCATGATCCACCCTGATCCAGCAGAGAGACCGTCTGCAGCAGCTCTGGCCAAGAGTCGAGTCCTCTGTCCCTCCCTGGGGAAAACAGAAGAGCTTCAGCACCAGTTGAACTTGGAAAAGTTCAAGACAGCCACACTGCAAAGGGAACTGAAAGAAGCCCAGCAGGCCCAGTCCCCCAAGGATGGCCACAGTGTACCCGGGGTCTCTGATACCCCCACCGGGTTAAGAAATGCCAAATGTCTGGTAGGAGGAAAGAGTGCCAAGTCTTCAAGCTTCACCTCGGGGCAGACTTCCCCATAAGAATGTCTCTCCAATCAACTTACTCTTTATCCCCAAAATAGATACTGGCTGTGTCGACCTTTCTTGTATAAAGGGAGGAACTAACAGACTTGAGAGGCTGAAGATTTCAAGAGCCACCCTAATTTAGCATTTTCAGCCAAGATCCTATAGCCACCAAGGCTTCCTAGCAGCACCAGTGGCAGGTACTACCATTAGCAGCCATTTTTCTTCTCTTGTTACATCCCTAACACCACCTGTAATCAGCTCAGTGACTCCTCAGATTTGCTGATGGTCAACAGGAAAGCATGGGCCTCTGAACTGAAAGCAGCCGCCCCCCCACTCCCCCCCAGCCCCTGCAGCCTGTGGACTACGAGGCTGCCCTACCTACCTGCCTACCAACCAAGGATCCCAGGGACTCTCCTGGCACACAGAAAGAAAGTCAATTTTGTTTAGAGTTGAGGTAGCATTTTTGTAAGGAAGTATGCCTGGATTTCAACAACACTTCCCAGGGTAGGTGATTTTATTCCTCAAAAAATTCTCAGTCGCTTTGAGAGAGTGGTTTTCCTACTGTATTCTCTGAACGGAGACAATCCCTTTCTCTGATACTGTTTTTACCAAGTAAATGACTTCACTATGTGAGGTAGGTAGAAATAAGACTCTATGTGACTTGAATTTCTGAACTGGCTATTAACTTATGGAACAAAACACTGGCTAGAGGGTTTGAGGGAAATCTGATGTGGTTTGTTGTCCCCCAATCTATTTGCTTTGATTCTCTTGTAATTGTTATAATGGATTTTGATTTTTCTGAGTGTTACTAATTTCTCCTGGATTTTATGAAAAGTTGGCTTTGATTCCTGTGATTTTATCCTATTTTATCCAAATCCTTTACTCTGAATATATATTCAAAGGAAATAGAACATTTGTAAATAAAGTTTTTTTTTTTTTAAATCTTGTCCAAAGCCAAATAGGAATAAAGCACTCTTCTTTGTAAATATGTAACTAACAAAGACTGAGAAATGCATGTTGGAAACCACAGTAGGTAGGAGAGAGAATTTAGTAGGCTAGGGCTAACAGCCCTTGGCTTTAAGGTTCAGTTTCACAGCCTTCACAGCTAATAATGGCCAGGCTATGACCCAAAATCATGTTGGTCACAAAAGCATTTGAGAACAACTAGTTGTGTCTTTTAATGATGTTACTCCTGTTGTGGCTTATAGGCTTTTTGGCTACCTTATTTTCTTCTTTCCCTTAATTTTTAAAAGCAAATTAAGTTTTAAAAATTGAATAAACCAGTGAACAAATCATCACATCATTCTTATGTTTTGGAGTAGCAATTTCTTCCCTGCAATTAAATGAGATATAGTGCTCTGTACTGCCCATTGACATTTTAAAAAATTAGTCTTTATTCAAAATTTTTTTCTGTATACACTTGTGTATTTTATTTTTATTTATTTTTAAAATATATTGGAATAT EMBV3_43757 GACCCCTTTCTCAATAACATGGTGGTGTATTTTGGATCTGTAATTCTCCGGGGTGTTCCC Gene GeneID:100298119|LOC100298119:XM_002688679:112_cdna Constitutive 0 NULL GeneID:100298119 7 GENE LOC100298119 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_27724 GGTTCCAGCTTACTTAGAAGGACAGGGTTGGAGAGCGCCGAATCCGCACCGAATTTGAAA Gene BVV0102_120697 - 1 EMBV3_14204 GK000013.2:23713075-23728841 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40032 AACTGAAGAGTGAGTAGGTGAAGGTGGCGAGGTGGGTTCCCTTTCCAAGGCCAGATTAAA Gene GeneID:512866|ERBB2IP:XM_002696290:23_cdna Constitutive 2 NULL GeneID:512866 20 GENE ERBB2IP NULL erbb2 interacting protein EMBV3_31177 GTGGTCATCACGGTGCTGCTCTCGGTCGCTATGTTCCTGCTGGTTCTGGGCTTGATCATT Gene GeneID:281569|UPK2:NM_174214:31_cdna Constitutive 0 NULL GeneID:281569 15 GENE UPK2 NULL uroplakin 2 EMBV3_37888 ACTGGAACTCCGGCTCTTCAACACCTCCAGTGATGCAGTAAACCTGGACCGCATGTACGA Gene GeneID:516420|USP46:XM_002688272:23_cdna UTR3_Alt 2 NULL GeneID:516420 6 GENE USP46 NULL ubiquitin specific peptidase 46 EMBV3_18001 TCTCCTGCCCCTAAAAAGGGCTCTAAAAAATCTGTGACCAAGGCCCAGAAGAAGGACGGC Gene GeneID:100300167|LOC100300167:XM_002692946:32_cdna Constitutive 0 NULL GeneID:100300167 15 GENE LOC100300167 NULL similar to histone cluster 1, H2bc EMBV3_21227 CCTTCTTGTCATGCTGATTGTGAAAATGGCTGGGCGATGTAAGTCTGGCTTTGACCCTCG Gene GeneID:767911|TMEM60:NM_001076988:18_cdna Constitutive 0 NULL GeneID:767911 4 GENE TMEM60 MGC127963 transmembrane protein 60 EMBV3_17581 GCAGGTACTATTGACTCTGACCAGTGCCTAGAACCTTTGTAATTTGCCCCTTCTTGCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19194 CATTTAAAGGCTTGGGCTGAGTATGTTGTGGAATGGGCTGCAAAGGACCCATACGGCTTC Gene GeneID:100295951|LOC100295951:XM_002688495:95_cdna Constitutive 0 NULL GeneID:100295951 7 GENE LOC100295951 NULL hypothetical protein LOC100295951 EMBV3_25069 CCTAAAGTACAGCTTTCAACTGTCCCCAAACCAGCAAGAAATAGTATAATTGATGCTGCT Variant GeneID:506615|LOC506615:XM_002698034:247_cdna 295^828 1 EMBV3_10703 GeneID:506615 25 GENE LOC506615 NULL similar to limkain b1 EMBV3_27785 GAGTAGAGGGTAAATTGTGGAAAACTGAGGGCAATGCAAATGATTCTTGACCATAGCAAG Gene BVV0102_136769 + 0 NULL GK000008.2:18570369-19629741 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40854 TTTCAGTGTTTATTACTGACTAGAGCAGCGACTTTTAGTCACTTTTGCATCATGGACCTC Gene BVT0102_194187 + 0 NULL GK000001.2:65292072-65309497 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16664 GACTGTCTTATCCCAAGGACACCTGACTCCTCTCCCTCTCTATGTCTGCCCAGTGTATTG Gene GeneID:518653|POLE2:NM_001105383:67_cdna Constitutive 0 NULL GeneID:518653 10 GENE POLE2 MGC157096 polymerase (DNA directed), epsilon 2 (p59 subunit) EMBV3_05249 ATTATTACAGAGCAAACAAGATGAGCTGCTGCACAGGCTACCATCGCTCAGACTGGGTGC Gene BVT0102_086206 + 0 NULL GK000019.2:34929471-34931814 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093422 TCONS_00096485 TCONS_00093421 TCONS_00096484 2 XLOC_057143 XLOC_057981 Coding TCONS_00096484 XLOC_057981 Coding Coding LOC781661 19:34929734-34961343 = TSS71686 6092 1 TCONS_00096484_4 896 3 0.807358896481903 0.00149767218622296 0.00237347995754749 0.000455021110072977 0.000129713040260874 0.000630211764531482 8.92849138753027e-06 0.000563157850866432 0.000657620699855877 0.00105144530910898 0.000300294818944122 7.58694115897542e-06 0.000371756884654428 2.24264466476667e-05 0.000467104787322881 6.70103925040758e-26 0.00104368385725631 7.91937387541369e-46 0.000464220624587017 0.000870610241611611 0.00113537145267454 0.000737205207460197 0.000241601544960016 0.000482362067226564 0.000102000316443574 0.00208915743761218 0.00150336084927785 0.000260196944789436 0.000202667333248811 0.000115294745558598 4.71527282067135e-05 XM_003587411.2 SMCR8 PREDICTED: Bos taurus Smith-Magenis syndrome chromosome region, candidate 8 (SMCR8), mRNA. 0.0 7988 100.00 0.726854891661195 NM_144775.2 SMCR8 Homo sapiens Smith-Magenis syndrome chromosome region, candidate 8 (SMCR8), mRNA. 0.0 1683 83.40 0.261326329612607 TCONS_00096484_4 sp|Q8TEV9|SMCR8_HUMAN SMCR8_HUMAN Smith-Magenis syndrome chromosomal region candidate gene 8 protein; 0.0 1550 83.37 0.998883928571429 1 coding 0 1 1 1 0.035547969159176 0.773081314916131 0.00564045805162938 0.901008517368526 CGCTCCGCTCTCGGGAAACGCAGCTCTCCGGTTCGGAAGTTGACGCGGACGTTTCCGGGTCACGCGGCACGACAGCTCGAGTCATGTGACACCAAGATGGCGGCGCCGCGGTAGCTGGATCCGGGTTGTGGCGTCCGAGGAGCCGTGACGGTTTCTGCCTTCGGGCCGTGGGAGTCGTCACGCTTGGCTGGTCCGTGCCGCAGCCCGCAGCCGCGCACTGGGCAACTGTCCTGAGGTGGGGCTGTTGCCGTGGTGGTGTGCTCGGGGGAGCGCCGGTGACCTCGCTGCGGGTGCCCGCCGCGGTCGCGGGAGGAGGCGAAGGGCAACCAGTCTCCTGGGTCTTCCTGACCTGCGGAGTTCCTGGGGTCTCCTGAGGCCTCCGGAACCCTTGAAGGAGCCACACCTTTGAGGGGCTGCGAGAACTCGAACCTCCGGTTTGTGATTGGCAGCCTCGGACCCCTGAGGACGCAAAGAAGACTGCTCCGCAGGGACTTTGCTTCCTCCTCCAGAGGCCTGGCTCCCCCGCGTTGGCTACCTCCGCATCTGTTCTACTTCCTCTCCATGTTCTTCCCATATACCTGAAAATATGATCAGCGCCCCTGACGTGGTGGCCTTCACCAAAGAGGACGAGTACGAGGAGGAGCCTTACAATGAGCCGGCACTGCCCGAGGAGTACTCGGTGCCGCTCTTCCCCTTCGCCAGCCAAGGAGCCAATCCATGGTCCAAACTGTCCGGGGCCAAGTTCTCTCGGGACTTCATCCTTATTTCCGAATTCTCTGAGCAGGTGGGACCCCAGCCCTTACTGACCATCCCCAATGACACCAAAGTTTTTGGTAATTTTGATCTCAATTACTTCTCTTTGCGGATCATGTCTGTGGATTACCAGGCCTCCTTCGTGGGGCATCCTCCTGGCTCTGCCTACCCCAAACTGAACTTTGTGGAGGACTCCAAGGTGGTGCTGGGTGACTCCAAGGAAGGGGCCTTTGCTTACGTGCACCATCTCACCCTGTACGACCTGGAGGCCCGCGGCTTCGTGAGGCCCTTTTGTATGGCTTATATCTCGGCAGACCAGCACAAAATTATGCAGCAGTTCCAGGAGCTCTCAGCTGAATTTTCCAAAGCATCAGAGTGCTTGAAGACAGGCAACAGGAAGGCTTTTGCCGGGGAACTTGAAAAAAAACTGAAAGATTTGGATTACACCAGGACAGTGCTACACACGGAGACAGAGATCCAGAAGAAAGCTAATGACAAAGGGTTTTACTCATCTCAGGCCATCGAGAAGGCCAATGAACTGGCCAGTGTAGAGAAGTCCATCATCGAACATCAAGACCTTCTAAGGCAGATCCGCTCATACCCTCATCGCAAGTTGAGGGGGTCCAGTTTGTGTCCTAGGGAATCGGAGCACATCCAGGATCCGCCCAGCCAGGCAGCCACTACCTCTGACCCTGAAGAGTCTGCTGACACCGACCATTATGCCTGCAGACCCTCCTACACCCCGAAACTCATCAAAGCAAAGTCCACCAAGTGTTTCGACAAGAAGCTCAAGACCTTGGAGGAGCTCTGTGACACCGAGTACTTCACCCAGACCCTGGCGCAGCTCCGCCACATTGAGCACATGTTCAGAGGGGACCTTTGTTACCTCCTGACCAGTCAGATTGACAGATCTCCAGAAGACTGTTTGGTTCCTCAAGTATTAATCAGCGTGGGCTCCTACAAATCCAGTGTGGAGTCCGTGCTCATCAAGATGGAGCAGGACCTTGGGGATGAGGCATCAAGGGAAGCGGCCGTGATGGAATCAAGCAGTTTTGACCCCCAGGAGAACTTGGACTACCTGGAGATGGACATGAAAGGGAGCGTTAGTAGCGGAGAGAGCATCGAGGTTCTGGGCACAGAGAAACCCACCTCTGTGCTGTCGAAGTCTGAGAGCCAGTCCAGCCTCACAGTGCCCTTGAGCCCCCAGGTCGTCCGGAGCAAGGCAGTCAGCCACAGGACCATCAGCGGGGACAGCATCGAAGTCCTCAGCACCTGCCCCTCTGAGGCCCTCATCCCTGACGACTTCAAGGCCAGCTATCCAAGTGCCATTAACGAGGAGGAGTCCTACGCAGAAGGCAGCCAGGGGGCCATCCACTTCCAGGCAGGCATCAGCCCACCGGAGGCGGGGGAGGCCGAGGAGGGCAGCTCGGGCCTCGCTTTGCTGCAGACAGATGCCTCCTGCTGCATCGGGAGGGAAGCTGGTGCTCTGCTGGTGCCGCTCTCCACCCCAGGCCACACACTCTCCGATGAGGACGGGGTCGTGAGCGTTCCCCCACAGCGCTACCGGCAGAAGGACCAAGGGTTCCACGTGGACTTCTCGGTGGAAAATGCCAGTCCTTCTTCCCGAGACAATAGTTGTGAAGGCTTCCCTGCTTATGAGCTGGACCCGAGCCACCTGCTGACCAGCCTAGACGGCAGTAAGACCAGCCTGGATGACCACTCCGATGCCACCAGCTATGGGAGCAGCGTAGCCTCCACCAGCTCCGACAGGACTCCCTCCTCCATGCCTCCTGCTGGCCCCTCTTCCGAGAGGCACAAGAAGAGGGCAGGCCAGAACGCCTTAAAGTTCATCCGCCAGTACCCGTTTGCCCACCCAGCCATCTACTCCCTGCTCAGCGGGAGGACGCTGGTGGTCCTGGGGGAAGAGGAGGCCATGGTCAGGAAGCTGGTGACTGCGCTCTCCATCTTTGTCCCTGGCTACGGCCGCCATGGCAAACCCGTGAAGCACTGGCTCTCCTCCCCTTTGCACATCACGGACTTCCAGAAGTGGAAGCTTATTGGCCTGCAGAGGGTGGCATCCCCCGCCAGTGCCAGTGCCCTGCACGCCCTGAGCCGCTATAGCCGCTACACGAGCATCCTTGACCTGGACCGGAAGACCTTGCGCTGCCCGCTCTACAGGGGCACCCTGGTGCCACGGCTGGCGGACCACCGTACACACATCCGGCGGGGCAGCACCTACTTCCTGCACGTGCAGAGCATGCTCGCACAGCTGTGTGCCAAGGCCTTCCTCTACACCTTCTGCCATCACCTGCACCTGCCCGCGCACGGCGGTGAGGCCCCGGAGCTGGCTGCCAGTCGCCAGGCCAGCTTCCTGCAGCTGACACTGGGGCTAGTGCATGAGGACGTCAAGGTGGTGCGGTACCTGGCGGAGCTGCTGCGGCTGCACTACACGCAGGAGCGGCGCGGGACCAGCCAGCCTGCCCTCAGGTTCGACTACGTGCCCAGCTTTCTGTACAAGATCTGAGTCCAGCCCGCCTCGGTGACTGAGACCTGTGGCCCAGGGTTGGGGAGGGGTTGGCATGACTGAGCGGTCCTCTGAGCTGTTTGGACTCCTGCTGTTGTCAGCGGGAAGGACACCAAGGCAGCAGCCATGGTTCCCAGGTGCCTCTGGGCAAGGGTGGAGGGCCTGGCCCTCTGGCAGTGTCCCTTGGAGGAGAGTGGTTGGCGTCAGGCCCAGAGGCTGGGACAGAAGAAAGTCTCAGTGGTGGATTAGGGCAGCGGGGCAGAGCCCATGTGGAGGACCACGCTGGTTGCGGGCAGGTTCTCTGGACACTCACACAAGCAAGATCAGGGGGGCAGCTGTTGCTTGGAGGACACGGGAAGCAGGACGAGGCTCTTCACTCGGCTTCGTGGAGCCGCCCTCTCAGGGAGGCTCCTGAAGGCACCCTACCCAGGCCTCACCTCCTGACCAGGCATGGAGGCGCCTGTCACTGGGCTCTCCAGTTCAGCAGGAGTGAGCGGAGTCACTGGCACCCAATTTTCAGATCTGTTCTCGGGGGTGGGGAGCCCCGGAGACAAGGCCACGGGGTTCCTCGAGGAAGAGCCAGCCCTGTCCACCCCCCTGGCCAGGTGATCCTACTCTGTTCTTTCAAAGGGTCTGCCGACAGGCTGGAGCTCAGTTGGCAGAGGTCACCCCAGTCCTCACACCCACAGCAAACCTTTGCAACCACTTCACTACCTCGTGGGGTGTCACGGGCCTGGCGGCCGCTGGGTCCTACTCAGCCAGCCACCAGGCTGGGGTCTCCAGGAAGGCTGTGTGGCAGTCTCAGTGATCTGCCTCAGGGGCTGTGCTGGCCTGGAGCGTGGGCACCTTACGGCAGCTTGCTCTGCTGCAGCCCCCCCCCACCCCGAGTCCCCCACACCTTCACCCACCAGGACCCCCGAGGCTCTGACAGTTACCCCTGATGTATATAGATGGGTGGTTTTTGCAATCTTGAGACTTTTGTACCTTCTTTTCCTCATGCTGTTTTTCCTAAAGTAGAGAGAACTCTTGGTGTTACTGCTTTACGTTTCCCCAAATTGTGATAAACACACCTGAACCAGCCACAGTGGTTGCTCCTGAGCATGTGTGTGCAAGCCTGCTGGGGCAGCATTCCGTGTTGTTGGCTCCATGTCACCTCAGTCTGGTGGCTTCTCCCTGCCTGGGCTTCTGCTCAGGGCCTCCATTCCCGCTGGAGGGCTGGTCCTGCTCCAGAGTCTGTGACTGAGGCCCCTTGGGGGCATTGTGTCGCCTTGTCTTCTCGGCTGTGTACCTGTGCTGTCACCTGTGTTCCCCCAGAGGCGTCTCCGGGGATGGCCCGGCAGCTTTTAAATGTGCAGTGTGGGTACAGGCAGGAAGACTGTCCTCCTGTTACTCCCCACTCCCCGCTCCTCGTGTTCTGAGGCTGCTTTGTTTCCAGGTAGGTGGCTGATTGTGTCTACTTGGGCCTCCTGGGACATGAGCTTTTGTGACACCTTACGTCGAGGGAAGATTGGTGGGCCATGGGGCTCCAGTGACCAGATACAAGGTGATCACTGGCCCACCTGTTTTGTTCCTGGGCCATCAGCATGGACTCAGCAGTTCACACCTCTTACTTGGGAAGCTGGGAGGGGCAGCAGGTCAGTCACACTGGCCTCCTTGAAGCAAAAGTCCAATTCTGGAGAGTATTTGTGCAGAAGCTACACCTTAAGTGGTCAGGAGACCCCCAGGGTGTGGAGGGCAAGCCTGGCTGGTGTGAGCAGGCCTGGCCATGGGGCAGCCACAGAGTGGGCACCCGGGAGCCAGTCCCTTGAGCTGTGTCTTCACTTAGAAGTAGCCTTTGCTAACTAGTGGTTGAACTCCAGCATTTAAATGTTGGTTAGACGCCAGCTCTGCAGTGTGGCTGTTTCACAGGCTTGCTTGATGGCAAGTATGTTTCTCTTCAGAGGATCTCGAAAGGGAACCAGGCTCTCCCTGCCCTGCCACAGTTCCGGAACCTGCCAGAAGTGTCAGACGCACCCAGTCTGAGCGATGGTAGCCTGTGCAGCAGCTCATCTTGTTTGCTCTGTAATAATAAGTGTTCAAACACCAAGACACTTAAGAAATCAGGGTGTTAGCACCCCTTGTTCAGTTCTGGTGTCACCTTGGAGGCCCAGGCACCAAAACCTTGAGGTTGGTTTCAGCTTCACTTCCAGTCTGTTACGTGCACCGCGCCCCCCTGCCACCACCTTTTTAAAGTAGTCCAGGTTATGAAGAACCTGCTCAAGCTGGCAGTTAAGAGATTTCCAGAAGCTCCACACCCGCCGAACCCTTTTACAGCCCCTGGGGGGCTTGCTCCTTCAGTAGAAACTGATCCCAGGTCATTTCCCAGTTGGTTCTTAACATCTTGTTTTAGGTCAGTTACCACCTGCAGAGATTGTAAATTTCACCCCCAAACTAGTGACAAGTCACAGGAAGGCTGATAGATTCTCCCCCAAGTGCTGCTGCAGCTCATGACACGTCCCCAGAGGCCAAGCAGTCCAGACGACCCTGCACACAGCTTGCCGCCCCCTCCCTGGCCTGATGTTGCCTGCCCGGCCAGCTTCTCCACTCAGTCCATGATGCTGCCGCTGCCACATGGTCTCCACACAGACAGGAGCCCTCGGCTAGTGGACAGCCTTTCCCATCTCCCTAGAGGCTTGAGAAAGTGCCTTGGCTCGTGCTGTGAAGCAAACCAGCTGGCTTTCTGGCTTTTCCCCAGTGTTGTGATAGAAACTGCTAAAACTGAAATTTTAAAGAAAGACAGCATTAGCAGACAAAGCATCAAATCTCTACTTCTGCC EMBV3_03602 CGTCCAGGCTTCCAGAAACACGCCTTGAACCTTCCTTCTTTATTGCCTTTGCTCATGCTG Gene GeneID:514663|LRG1:NM_001046177:27_cdna Constitutive 0 NULL GeneID:514663 7 GENE LRG1 MGC137162 leucine-rich alpha-2-glycoprotein 1 EMBV3_08844 GAGATTTTACTTTTGTATAGTTTGCTGGGGTGTGGGGGCAGTGGGCTATGGTTTTTACCC Gene GeneID:100124505|PDE4B:NM_001102546:2_cdna UTR3_Alt 2 NULL GeneID:100124505 3 GENE PDE4B MGC152127 MGC154987 phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila) EMBV3_33598 AGCCAGGAGACCCGGAGGGCAGGCAACTTCCAACAACTAGAAACGTCTAGGGAATGTTCT Gene BVT0102_140216 + 1 EMBV3_09348 GK000013.2:43610263-43625060 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045262 1 XLOC_026393 NonCoding TCONS_00045262 XLOC_026393 NonCoding NonCoding - 13:43613141-43617713 - TSS33074 684 1 TCONS_00045262_1 38 0.747076023391813 2 0.850798512360534 0.000323235504891304 0 8.45577963419875e-05 0.000165920814056407 0 9.5875944016383e-07 1.70517400472562e-05 1.08090563077847e-06 0 1.94496063268136e-05 7.41990325139001e-06 2.97858765227668e-06 0 8.71109752928766e-06 1.67470458011015e-05 0.000885816501657176 0.000209956165040418 0.000297204609435121 5.24190796413096e-06 0.000120821018176748 0 0.000554798565225558 0.000505566231452928 0.00130827466763296 0 0 0 2.88311205436957e-05 3.85450746373808e-05 4.19159742421861e-05 XM_005208073.1 ART3 PREDICTED: Bos taurus ADP-ribosyltransferase 3 (ART3), transcript 2e-70 269 88.29 0.320175438596491 0 noncoding AGAGGGGCCATGTGGCAACAAAGACGGAAGCAAAGACGGAAGCAGGGGAACTGCCGGCTTTCAAGACAGAGGAAGGAGCCAGGAGACCCGGAGGGCAGGCAACTTCCAACAACTAGAAACATCTAGGGAATGTTCTCCCCTAGGAGCTCCAGAAAAATTGCAGCCCTGCTGACCCGTTCTGGGTATCTGCCCTCCCCAACGATATCTCAGGAGGAGAAAAGCTGAGTGCAAAGTCCCTGGATGATGTCCCACAGCCAGCAGACCTGCCCAGTGGGAGGGATGCCAAGGAGTGATCAGACCTTGAAAGGTTATTGCTGAATCACGCGAATACACCAGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGAACGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGAGGCAGAAAGAGTACCCCCCTGCTAGTCTTTAGCTGGATGTTATATAGTCACTAGCAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGATGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGGCAGACCACCATACAAATAGTTTCATTTACATTAGGGGATTAGGGGAACAATTACATTAGGACAATTACATTAGATTAGGG TCONS_00042776 r 3' 2880 TCONS_00042776 r 3' 3362 EMBV3_39671 AAGAGGACCGAGAGTAGCTTCCCCGTGGCATCTTGTTGACAGGCTTTGCGTCTGCACAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24918 TATGAGGCCTGCACCTTGGCTGTTTGGGAGCTGTGGACTCCATGGTCAGTTGTCTTCCTT Gene GeneID:533678|NUDCD3:NM_001075997:46_cdna Constitutive 0 NULL GeneID:533678 4 GENE NUDCD3 MGC137347 NudC domain containing 3 EMBV3_15740 AGCATCGTGGGGGCCTATATCTGCATCTTCGTAGGGGAGACGCTGCTGTTTTCTAACTGG Gene GeneID:613889|SPNS2:XM_002707759:225_cdna Constitutive 0 NULL GeneID:613889 19 GENE SPNS2 NULL spinster homolog 2 (Drosophila) EMBV3_24177 ATTCTGCCTCTTGAAGTTTTGCTGAAGAATATGTCTGGTTAGGATAGCACAAACATTAAC Gene BVT0102_213082 + 0 NULL GK000009.2:84136431-84176328 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237896 TCONS_00237899 TCONS_00237897 TCONS_00237894 TCONS_00237895 TCONS_00237898 1 XLOC_144835 Coding TCONS_00237898 XLOC_144835 Coding Coding FBXO30 9:84171312-84191530 j TSS177749 8200 1 TCONS_00237898_3 745 0.100609756097561 3 0.594549141811347 0.000966472171195935 0.000879282577255921 0.00096853756421221 0.000765766866491518 0.000414189032146346 0.000393301039243343 0.00101704241284129 0.000279127428021595 0.00177981132657969 5.29433351452589e-06 5.90156073538797e-08 1.08111233350433e-05 6.01615921895975e-05 0.000128243526100884 8.24939759239551e-05 0.00128403300041182 0.000284577955620018 1.3408625641804e-06 0.000911396682383906 0.00106326200569721 5.77389038442033e-05 0.000430186187320369 0.000785263271468302 0.00112128636514916 0.00105575966889304 0.000570434666431018 0.000395027744148186 3.08599178720983e-05 0.000101861258196999 1.45433184671729e-08 XM_005211022.1 FBXO30 PREDICTED: Bos taurus F-box protein 30 (FBXO30), transcript variant 0.0 5393 100.00 0.364512195121951 NM_032145.4 FBXO30 Homo sapiens F-box protein 30 (FBXO30), mRNA. 0.0 4039 88.06 0.389878048780488 TCONS_00237898_3 sp|Q8TB52|FBX30_HUMAN FBX30_HUMAN F-box only protein 30; 0.0 1418 90.91 0.998657718120805 1 coding 1 1 1 0 0.885673650988243 0.0847507171797813 -0.122481624937707 0.194061026246158 GAGGACCGGCGCCCGGATAGGAGGCCGAGGAGGAGGAGTAGGGGAGAAAAGCCGGCGGCCCGGTGGGGCAGAGGGGCGAGCAGGAGGCCGGTTGCACGGGTGTGTGGGGCGCGGAGCGGCGCCGGGACAGCGGGGAGCAGCTGGGCACGGCGGCCGCGGCAGCCGGGATTTGGGCCGCGGTTCGGCCGGGCCGGCCGAGCTGGACTGGCCATCATGGAGGAGGAGCTGCAGCATTCGCACTGCGTTAATTGTGTCAGTAGACGATGTATGACAAGACCAGAGCCTGGGATTTCCTGTGACTTGATTGGTTGTCCATTGGTTTGTGGAGCAGTTTTCCATGCATGTAAGGCTGATGAGCATCGACTTTTATGTCCATTTGAACGAGTGCCTTGCTTAAATAGTGACTTTGGATGTCCATTTACAATGGCTCGAAATAAAGTTGCTGAACATCTAGAAACGTGCCCTGCAAGTGTGGTGTGCTGTACCATGGAATGGAACCGATGGCCAGTTAGTTATGCAGACCGGAAATCATATGAAAATCTAAGCAGAGATGTTGATGAAGTGGCACAATTAGACATGGCCTTGGCCCTTCAAGACCAACGGATGCTCTTAGAATCTCTCAAAGTAGCCACCATGATGTCAAAAGCAACTGATAAAGTGTCAGAACCTAGAGAACAGATCTCAGTTAAACCAAGTGTCTCAGAAATACCACATACTAATGGTTTGGTGTCAGTTGATGAAGAATCTTATGGTGCACTTTATCAAGCTACTGTTGAAACAACCCGAAGTTTGGCTGCTGCTTTAGATATTCTGAATACTGCTACAAGAGACATTGGCATGCTAAGTACGAGTCTTTGTGCTTCCCTAAATGAAATGAATGAAGAGCAAAAAGCCAGGGAAGGCTTACAGAATAGAAACCAGAAAGACCAGGACCATCTTTATGAGGATGAGATGGGAGCAGTAGGTGGAATTGACCATAAGGACACGAGTCAGAATGCCCAGTTGGAACAAAATGGTTCAAGTGATTTATTATGTGACTTTAATGCCAGTTCTTATGGCACTTCTGCTCTTTGTAATGGCTTTCCTTTGGAAGATATATGTGCACAGGTCATTGAGCAGAACCAGGATTTACATACTGACTCAAAACAAAGTAACTTAACAAATGGAGAATGTGTAGCATCAGGTGGCTCTTCAGAACCTTCTAGTTCACTTTTAGTAGCAGCACAAGTTCGGGAAGTAATACCACCTAATGCTTTGCCTAATGGCACGGTTCAGCATATCCTCGTGCCAGATGATGATGAAGACTTGTGTTGGAAAAAAGTAGACTTAGGGGACCTACGGAATGTGGATGTCTTATCTTTCAGTCACCCTCCTTCATTCAAATTTCTTTCGAATTCATGTTGGTCTAAACCAAAGGAAGATAAAGCAGTAGATACATCAGATTTGGAAGTTGCGGAAGATCCAATGGGTCTCCAAGGAATAGATCTAATCACAGCAGCATTACTGTTTTGTCTAGGAGATTCTCCAGGTGGGAGGGGTATATCTGATAGTCGCATGGCTGATGTTTATCATGTTGACTTTGGGACTCAGACTTTTTCACTTCCATCTACCATTTTAGCTACAGATACAATGGTTGGGGAAATAGCTTCAGCTTCAGCTTGTGATCATGCCAACCCACAGCTTTCAAATCCAAGCCCTTTTCAGACACTGGGGCTGGACTTAGTATTGGAATGTGTCGCTAGGTACCAGCCCAAGCAGCGTCCAATGTTTACATTTGTTTGTGGACAATTATTTAGAAGAAAAGAATTTTCATCACATTTTAAGAACGTGCATGGTGACATTCATGCTGGACTCAATGGCTGGATGGAACAGAGGTGTCCTTTAGCATATTACGGTTGTACCTATTCACAGCGTAGATTTTGTCCATCAACACAAGGAGCAAAGATTATACATGACCACCATTTGCGGTCATTTGGAGTTCAGCCGTCTGTATCTACAGTGTTAGTAGAGCCTGCTAGAAACTGTGTGCTGGGTTTACATAGTGACCATCTAAGTAGTCTTCCTTTTGAAGTCCTGCAACATATTGCAGGATTTCTCGATGGCTTCAGCTTATGCCAGCTCTCATGTGTATCCAAGTTAATGAGGGATGTGTGTGGCAGTCTTCTCCAGTCTCGTGGAATGGTCATACTTCAGTGGGGGAAAAAGAAGTATCCAGAAGGAAATTCGTCATGGCAGATAAAAGAAAAGGTATGGCGATTCAGTACTGCATTTTGTTCTGTCGATGAATGGAAGTTTGCTGACATCCTGAGCATGGCTGACCACCTGAAGAAGTGCAGTTACAACATTGTAGAGAAGCGGGAGGAAGCGATCCCACTGCCGTGTATGTGCGTGACACGAGAACTCACTAAAGAAGGACGTTCACTTCGCTCAGTTTTAAAACCTGTACTTTAAAAAGTCAAATTCCACTTGCACATACATGCAAGCTCCTAGTATAATTTCTTTGTAATATGTGACACCTTATTAATGTATTAAAGATTACAACTAGCTAAATTTATTGTCACTATGTATATAATGTTTTGAAGTGACATATATTTTTATAAAGTACTGATTAGTTGGGAAAAAGTTGCCTTAATATTTGAAATGTGTGAATTTTTTGGAACTTGCTGGACAGGGTGATTTAATTTTTGGCTACATAATTTTCAGAATTAGTATTTTTAATGGTGTGCATATTTTGGTTCTTACATTTTTTGCTTCTTAAACTAACAAGATCCTGACCAAACAATTTACTCCTCATTTTCTGTGGGTTACAACCCATGCATTCAAAAAGCAAAACTTTGATTCTGATTTTTACATCATAGGCTCTTCAGATAAAACATTCAGTTGCTTAAGCACTGCATAAAAACATTATAAAATTTTTATTTTCTAGTGTTCCCGTTACATAATTGTTGATATGGAAATGATCTGTAATGTAAACATAATATTTAAATCGTGAATGATGTTGATAATGCCATTTATCGTGTTTTAAAAATAATCCACAAAAATATTGTCTCCTTTTGTGTTTACACCTCTCATACAGAGAGTTACCATTTGCACCTTTTTTTGATTAGATGCCACATCCAAAGACTCATAGCAATATGTTACATGACAGGTTAAAGCAAAATCAAACCCAAAAAAAGCCTGTGAATTTAATTTGAAATTGTATATATTTGCTAGGAATTTGATATTTGGAGAGAAGAAAATACAGTCGACCCTTCATATCTGGATATCCATGGATTCAATCAAAGGATGGAAAATGTTTGGAAAAAAAAAATTCCATGAAATTCCAAAAAACACAACTTGAATTTGCCACTCATCTTCAACTATTTACATAGCACTTACATTATATTTGGGCTTTCCTGGTGGCTCAGACGGTAAAGTATCTGCCTGCAATGCAGGAGACATGGTTTGATCCATGGATCAGGAAGATCCCCTGGAGAAGGAAATGGCCACCCACTCCAGTATTCCTGCCTGAAGAATTCCATGGACAGAGGAGCCTGGCAAGCTACAGTACATGGGGTCGCAAAGAGTCAGACATGACTGAACAACTAACATTACACTACTACTACATTATATTTACAATTATTTACATGGTGTTTTCATTACATTCAGTTCAGTCGCTCAGTCTTGTCTGATTCTATGCGACCCTATAGACTGCAACGTGTGCCAGGCTTCCTGTCCATCACCAACTCCTGGAGCTTGCTAAAACTCATGTTCATCGAGTCGGTGATGCCATCTAACCATTTCATGCTCTGTCATCCCCTTCTCCTGCCTTCAGTCTTTGCATTAGGTACTATTAATAGTTTAGAGATGATATAAAGTGTATGGGAGGTGTGCATGGGTTATGTGCAGATACTGTGCCATTTTATATGAAGCAGTTGAACATCTGTGAATTTTGGTACTGCAGGGAGTCCTGGAACCAATCTTCTGCAGACACTGAGGGACAACTGACTGTATGCCCCATTTTAAGTTTGAGTTGGGCATGTTCTGTGAATAAATTTCAGATATTCACAGTGCAAAGGGCTTAACCTTTTTCAGAAGTGTTTAAAATTTTTGCCTTTTGGTGTTTATAAAAATCACAATTATGTTGTTTTAAGACATGTAAAAATGTGCCATTTGCTGTCCTTTTAAGATGACAATCATGAACTGCAGAGAAGCCTGTCTTGGTTGACAATCTCTTTAAAACATTTCCAGGTTAATATTCCATACACTTCTCTACCAAAAAAGTTAAGAATTGCACCTTTATGTAAAAATCAAAATTTAACAGAAATATCTTCAAGGACCTGTTCTTGAGGTATTTGATTATAGTTTTCAAATCGATTTATGCTATCATTAACCTGATATGGTCAGTTTAAAAAATGAATATATCAGTATTAAGAAATAAATGGCAAAGATGGGGACATGTACTTAAATAATTTAGGTAACTTCTGGCATTTGGTAGTCTGAAATGGTTACAAATTACATTGTTATATATAAAATTTCAAAACTCTGTTTTGTCTTCTCTTCCTACTTTTGTCCCTAAGAGTGCTCTATTGTTAACTAGATTCTTGATTCCCATATATGGCATTCGGGCTGGGAAGAGGCATTCTTTGGGCATTACAAAAGAATTCTGAATTGCTTAAAACCTGATTTGGTTGGATCAAGTCCTTATTACAGTTGAAAAATACAGCATTGAAGACTAATCAGTTGTTTTGCCTCACCTGTCATTTTAACTAGTAGAATACTTATTTCTCAGTACTTAAACTATCATTTTGAACTGTGAGATTTGAATTACATAAACAGTCTATTTCTGTGAAAAAGTCAGAAGTAAGATATCAAATACTGTAAAATATAATTCTGCCTCTTGAAGTTTTGCTGAAGAATATGTCTGGTTAGGATAGCACAAACATTAACTTTTTGTTTTATGGTTGTGCTTTTTAAAAATCCTTGTTCGTTTAAGTTTAGACTCCTTATTTTCACACTAGATCCAGAGATATTTACCATTTTTCACCTTTTATTTTCTTTTACACATCTTTGGCTGTTTTCTTTTTGTTTGTTATGCCACCATATTATTTTGTTAAAATGTTTTCTTTGTGTAGTATTTGTTCAAGTTCTAATAAAATTAATATTTTCCTTTATATGGCTCAGTAACTTGAAAAAAACCTACATTTAAAATATTCATCCTTGTTTGACAAAGTTGAGACACAGTCATACTGTTTCTATAGTGCGGTTTTCTGCATGTTATAGGAGTTGCTTGATGATTATCATTGCTCACCCATGTTTTAATGGTGAACATTATTACTATTTTTATTTAATACGGAAAACTCAATAGTTAGCTTTCTCTGCCCCTTCAGTGTCTTCTTTAAAGTAGCCCCACCTGGGGCTGTTGAATGGCTGAAGAGTTTCTGGCAATAGTATTTTTCTAAAACTTGTAGTGGGAACAATCTGTCTAGCCTTTTAAGCATGAAAAGGTTTGTGTGTTGGCCAAGTATGTTGTCATTTGAGGTCTTTATTGATTCCTTAGTCTTTGCTAGCCAGCAAGATAAAGGCAAGTATTAGGAAGGAAGGAAATACCTGAATTCACTTTTCTCCTCTGCCTTCATCCCCAGAACTGCCTATTAGCTTAATCTCAACCTTTCTTTTCCCCCTTCTCCCTCCGTCCTTGCCTCTTTCTCTCTCTCCCTCTCTTTCCCCCCTCTCTGTCCCTCTTTCCTTCTCTCTCCCTCACTCTAGCTTCTGAGGTTCACAGATCACTTAAGAGTAGTGTTTCCCAAAGTATGGTCCCTTGACCATCAGCATCACCTGGGAATTTGTTCAAAATGCAGATTTTTGGACCTTTTCACAGACTTACAGCATCTGAAACTCTGTGGTGGGAACCAGTAGTCTTGTAACAAAGGCCTCCCCAGAGGATTCTGATGCATGGTAACGTGAGAATTTAGAGGAAAGCCTGGGACATGCCCAGTTTTCTCGTGAGTAATACGTTGTTAGAACAGATACATGTGTGTATGTACCTACATGTATAGTCCCAAAATTAAGAGTAATAGTAATTTATTAGTATTACTTAAGTGATTAAATTTAATGATATATGTTGTCTTGATCTTACAGCCATATGACAAATATTAATACATTGGGTACCATGATTGTTGGACATTTTTTAAAAAGCTAGTATTTACTAGTATTTTAAATTTACTTATTACTAGTGTTTCACTAGTGTTTCTTCTGGTCGAAGTAAATTGCAGATTGTTTATTAGCACTAACAGTTAGCTTATCGTCATTCATTCTCTTGTTTAGTGATTGTAGACTCGTGAACATATTAGATTTCTAGGATAAATGGGGTAGATATAAAAAGATACTGGATTAAATTTGAAAAGAATTCTGTAGTAATTCTTTCAGTGCTATCAATAAGAGGTATTAAAGATTGGGTTTCTGATTTATCAGTAATACTGACTCTCTTTTGGTCTTTGACCCTGTGCTACATGTCCCAAGAATATTGTTACTATTATTAACTATCCTTTAACATTGAAGATTGGGATCCTTGCAGATTTGGTAGTTTATTCAACAACACTGCTAATAGATTTTTAATTTCTGGCAATTTGTATGTAGGTGTTGGTGTTTAGAAGCAAAACATGATTTCATGTTTTGCATCCCAGTCTAAAAAGACAGTTTATTTTTTAAATTTTCTAAGGGATAGTTTTGGAAACATTAAAAAATATATCATGCATGACACATCACACTGGAAAGTGATTAATTGGAACCTGTAGAGGTGAGTGTTAAGAATTACAGTAGAAAGAAATCCCTCATTCTTTCAAAAGGCTGGACAGAGCCTTCTGATGGAAATAATTTCTCTGATGTATATTTAGCTGGTTAACTAAATGTAGCTCTTTGCAGTTTTGACAAGCCTGTGAGGTCTTGGAAGCAAGAATGTGTAAGTCATGCCTTTAATCAGTTTATCAGTGACTCATCCATTGTGGTTAAAGTAATTCAGTGATATTTTTAAGATTTTGATATAAATCTGATTTCTGAACAAAAAAGTATAAGGTGTACAAAGTAAAGGCCAACTAGTAAAGTCCTTTTTAAGTAAAATAAAGGAAGAGGAAGAACAGTTTCCTTTAAAGTCATCTTTTACACTGTTTTTCCTTGATTTAAAAGCACTAAGTAAGTTCAAAAGGTAAGACCTTTCTTTTAAGTTAGCATTGTATGGATGAAAAAACCTAGGTACTGATGAGTGTATTAGAGTGAGAGCAATGTGTTCTGACACAGTTGTTTACAAATGCATAAAGAGAAGGGACATTCAGATGTAGGGAAATTATTTTGGAAAATATCGTTGCATAGAATATTTGATTCCTAACAAGTGTTTTAGAATGAGTTATTGGGTAATACCAAAAGGAAACAAAGTATTAATAGAAATCAAGTGCAGAATGCTGCTCTGAAAATCCTTTGCAAAAATATAGTCTTTTGCTGAGTTTTCAGGAGTATTTTGCTGCATCTGTGATTTGTAAAATTCTGTAAATGTATTGTCTATACATATATTTATTTGTATATGAAATCTCCATAAATCGGCCAAGTATATTTTAATAAACAACATGTTGAGATATACTAATGGAGATACATCTTGAAGTGCTGTTTTACCTTAGGACATTTCAAAACTGACGTTTTGTATTCAGAATGTTCGACATTCCAATGTGTTATGTGGGGAGTGATTTTAAATTAATTTAATAAACTACGTAGAAACGAGTTACATACAAGGATGATGCATGAACATGCTCTGTAGAAATACAATAAAATTCATTGATGAATCTCCTATTTTATAATTTTTTATTTTTGACATGCTGTACTGAAGCATCTTATTTACTATGAAGAAAAGCATTTTCTGAAGCAAACTGACAGCAGAAGTAATGGAAATCTGTTTCTTTTTCACTAACACCAGTAGAATTTTAAGCATCCCCCAATCGTATTATTAACCTGTTTGCTTGTAAATATGATAAGAAATGATCCTCCAGTACCTGAGTTGTAGTAGTGGTGTTTAATTGTTTGTTTGAAAGAAAGAAAACTGCATTTCTGTTGAACTCTTTTAAGACTAACTGACTAACCAGGTCAAATTGTCCTTTCTCAGTAAAAGCAAATTTATCAGGTTTAATTTTTCCCTTTTTCTAATACAAATTATTAGAATTTTTTACTCAGATCT EMBV3_00370 TCTCGGGAGTCTGCATAGGGGTGATCAGATAAGGTCATCTCCAAAGATCCGGGCAGCTCT Gene GeneID:506146|UNC13D:XM_002696175:151_cdna UTR3_Alt 2 NULL GeneID:506146 19 GENE UNC13D NULL unc-13 homolog D (C. elegans) EMBV3_32932 AGCAATCCTCAGACACCTCACTCAGGACAGCTTGTAAAAATTAAAATGAATAAACTACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32902 ACAGAAACTGCGAAGAAGATTTCAACTCCTGTGGGTCTCCTTACTTAGCAACCAAAATTA Variant GeneID:618047|DNAJC15:NM_001080332:220_cdna 254^401 4 EMBV3_17175 GeneID:618047 12 GENE DNAJC15 MGC148559 DnaJ (Hsp40) homolog, subfamily C, member 15 EMBV3_04530 AAGGCCATGATCCTCCTCAACTCCAGTATGTACCCTTCAGCTACAGCACCCCAGGAGGCT Gene GeneID:281146|ESR2:NM_174051:11_cdna Constitutive 0 NULL GeneID:281146 10 GENE ESR2 ERB estrogen receptor 2 (ER beta) EMBV3_18257 AGGTAGAAAGGACCCTACGGCTTCCCTGGTGGCTCAACGATAAAGAATCTGCCTGCAATG Gene BVV0102_203497 - 0 NULL GK000015.2:71245768-72466674 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21941 TGTAACAGCCACATAGAGAGGGCGCCGTGTTCCATAGCATGAGACAGAGGATTTCCAGTT Gene BVT0102_406385 + 0 NULL GK000009.2:104763843-104993578 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22109 CTGACTAAAGCTCTAGCCAGATCGTGTACAATAGTATGGAGCTCATACTTGCAGGTACCT Gene BVV0101_021812 + 0 NULL GK000030.2:131500237-131577195 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00254318 1 XLOC_157252 NonCoding TCONS_00254318 XLOC_157252 NonCoding NonCoding - X:131533125-131534433 - TSS191539 1308 1 TCONS_00254318_1 35 0.0474006116207951 1 0 5.20095016252831e-06 0 0 0 0 0 0 0 0 3.46019905688926e-05 1.75014196700825e-06 7.1076442365714e-05 0 0 0 4.03847044635753e-05 0 3.83653038133215e-05 0 0 0 0 0 0 0 0 0 0 0.000102065253786854 0.000124105518790967 XR_229354.1 LOC101902477 PREDICTED: Bos taurus uncharacterized LOC101902477 (LOC101902477), 2e-80 304 84.64 0.21177370030581 0 noncoding CTGCAGAGAGGTTACTCTATCATTTCCTGTTTTATAAGCTTCTAGATACCAGTCAAAATAAGCACGGCCAGGCTTTTCTAATTGTGTATGCAAAGAATATCAATTTTAGAATATCAAAAGAACCCCAGTTTGGCCATTTTAGATTGAGATCTCTTTTAGTATAATGTCTCCAATTAACTAGGTACTTGCAAGTATGAGCTCCATACTATTGTACACGATCTGGCTAGAGCTTTAGTCAGAGGCTAGCTTTCTGACCCTCTTTTGTTTCTGTTTTTGAGAGATTTTTGTTTCCCATTTTCAGCTGAATTTGTCAGGGATAAAAATCACTAGTGAACTTGTGTAGTGGGCCCATGTGCTGCTTGTGAGTTTAATTCTTCCACCTGTCACCCCAGAGTTGTTTCAGCTTATCTTACATGTCTTGGATTCTGCCTCCAGCAATCTAAAACCACCGTGGCTGCTCAGGTCACTGAATGGCCAGTTCTTATGTGTGACCCCCGGACAAGCAAGTATTTTAATTAATGAATGGGTTTCCCTATGGGACCACTGCACAGTATGAAGACTAGGCCTCCACCACTCCCGTAAATTTCTCAGTCACCTGAGAAAACCAAAACTGGCCGGGAGGAGTCTTGTCCCTTTTCTTCAAAGCAAAGCTCTCATGTACTTTCCTCACTTTTATCCTGACAAATTCTATAAAGGCAGTTAAATTGAGGAAAAGTGTCAGATCAACCTCTTACTTAACCACTCAGCCAAGACCATTTAGTCCCCTACAACGGAGCAACCTTAGCATCTTTCAGCCGAGCCCTGGGTATTCCTTGATTTTTTCCCCTAATCAAGCCCTCCCCTACCCAGTACCTTTCCACTGGGTGGATAATTCCCCCGGCATCTTTCAGCCAGCCCCCTTCCCAGTATCTTTTGCCTGGGTGGGGATTTCTTGGTATCTTTCAACCGAGCCCCACTCATTGTCTAGACCACGAGTGGGTATGCCCTGGGTGTTTCACTGGGGCCCCACCTAGTATCTTTCCTACTGTAAGGGGGCAGGTAACCTGCTTCACTGCCAAATAAAACTCAGAATCTCAACAATACAGGAGATTCGAGAACCAGGAGAGACTTACCCAAATTCATCTGCACTCCCCGAGGAGGCAGATGGGCACAAGGGGCCACTGCTGGTACCAAAGCTCCGGTTCCTTGTGGAGTCCAGTCACAGGAAGGAGGTGCACTCTGGATTGCTTCGTCAGTTCCCCTAACTGTTGACTAAAAAAAGATGTACAACTTGAGAGTTGTGAGTTAAGTTTTATTTGGGGCAAACTG TCONS_00245735 . 3' 32890 TCONS_00245735 . 3' 34197 EMBV3_00071 CCATCGGATCACCGACTGCCCCAAGCTCGAAGCCATGCAGACAAAGCAGGTTAGCAACAT Gene GeneID:505276|DDX41:NM_001082602:11_cdna Constitutive 0 NULL GeneID:505276 7 GENE DDX41 MGC148916 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 EMBV3_30921 CAGCCATGGTATGGAAGAATACAAAGAAGATGGGAGTGGGGAAGGCATCTGCAAGTGACG Gene GeneID:538565|GLIPR2:NM_001076112:56_cdna Constitutive 0 NULL GeneID:538565 8 GENE GLIPR2 C8H9ORF19 MGC142546 GLI pathogenesis-related 2 EMBV3_28882 ACCTCTCCTGGCCCGCTGTCGGTCTCTGCCTAACTCAACATGGCTTAACAGCCTAAATTA Gene BVT0102_277156 + 0 NULL GK000003.2:105789544-105795121 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12017 CCTCTGAAGGCTTCCTTCTGGCACCCGTGTTTTGAGGCTGAACACCATGTCATCGGTCTA Gene BVV0102_117284 + 0 NULL GK000022.2:60946560-60960187 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15226 TCCTCCTCATCCCCTGCCTTAAGTCCACTTCTCTGCCTCAGGGGTCTCTTCTCCTTGGCT Gene BVT0102_201234 - 1 EMBV3_28496 GK000003.2:9372445-9385091 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13075 GAGTCAGCGCACCATCACCGTCGGGGTGTACGCAGAGCAGCCCCCGGACCTGCACTGCGT Variant GeneID:505463|GADD45A:NM_001034247:28_cdna 327^548 1 EMBV3_14426 GeneID:505463 3 GENE GADD45A MGC128673 growth arrest and DNA-damage-inducible, alpha EMBV3_34824 TCTGCTGCGGCGGGAGAGGTGGTCGTGGAAGACATCAATGCAAGCCTGAATAAGAAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15608 GCCCTTCCCCACTTGAAACCCATCACGAAGATTCTTTCTGGCAATATGTAACTAACTGCC Gene GeneID:541171|MGC143035:NM_001083500:186_cdna UTR3_Alt 2 NULL GeneID:541171 3 GENE MGC143035 NULL hypothetical LOC541171 EMBV3_36431 ACAGGCACGAGTTTCAACGCTGTCCCCCTGTACCCCAACACTGTGCTACGATTCATCAGT Gene GeneID:614681|ZG16:XM_002698089:109_cdna Constitutive 0 NULL GeneID:614681 25 GENE ZG16 NULL zymogen granule protein 16 homolog (rat) EMBV3_35584 GGTGATGGGAGCAACTGGAGCGGTGGGCAGTTTTGTATTCAGAGATTTATCAACTTTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09097 CTGGACAACCGGGTACAAGAGACTAAGGTTGGGAATGGGAAAGGTGGGGTTTCCATGGTT Gene GeneID:540581|GPR61:NM_001038571:176_cdna Constitutive 0 NULL GeneID:540581 3 GENE GPR61 NULL G protein-coupled receptor 61 EMBV3_24558 CAGGGTTACTAACCAGATACCACGTCCGCTGTGCCACACTGGTGTCAGGAACACTAATAA Gene GeneID:522967|MYO1D:NM_001075838:256_cdna Constitutive 2 NULL GeneID:522967 19 GENE MYO1D KIAA0727 MGC137743 myosin ID EMBV3_33367 CCCTGCAGTGAAAACACTCTCTGAAATGAGAAAGAAGCCAGTGTTCCAGCCTGTCCACCC Gene GeneID:540938|CNOT10:NM_001083755:202_cdna Constitutive 0 NULL GeneID:540938 22 GENE CNOT10 MGC139097 CCR4-NOT transcription complex, subunit 10 EMBV3_12032 CAGGAGGGGCTCAGGGAGATAGTGTGTGCTGCCCCTGGCCCTCTCTGCCCTTCCGTCCCC Gene GeneID:100313032|MIR328:NR_031133:5_cdna Constitutive 0 NULL GeneID:100313032 18 GENE MIR328 bta-mir-328 microRNA mir-328 EMBV3_06214 TACAGCATCTACAGAGACCTGTGGGAACGAGGCTTCTTCCTCAGTGCGGCCGGCAAGTTT Gene GeneID:505571|TSEN34:NM_001034251:22_cdna Constitutive 0 NULL GeneID:505571 18 GENE TSEN34 MGC129062 tRNA splicing endonuclease 34 homolog (S. cerevisiae) EMBV3_13235 ACAGTAGTACAGTAAAACAGCTGGCATACAGGGCCTGGCATCAAGGGAACAGGCAAGACT Gene BVV0102_336113 + 0 NULL GK000018.2:47675770-47683549 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083599 TCONS_00083597 TCONS_00083600 TCONS_00083601 TCONS_00083598 1 XLOC_051302 Coding TCONS_00083599 XLOC_051302 Coding Coding ZNF570 18:47655686-47678949 j TSS62781 2205 2 TCONS_00083599_1 140 0.196825396825397 6 0.905468145473304 7.56046036218612e-05 7.97874248155128e-43 0.000160720521990598 1.88060602960016e-05 4.2302865021148e-206 3.89109103752697e-308 0.000286555059062255 1.80765899855182e-07 9.91558134075506e-05 2.74477016317068e-81 0 0 3.18487469948987e-06 2.20297254920917e-06 3.2817201502263e-06 0.000345599066318513 5.70343079657206e-110 1.57286171915721e-08 1.44420540009242e-29 3.12953747127064e-06 0.000323598379168142 0.00061292354546497 4.36877654463195e-35 0.00053596959061809 2.24635597221227e-32 1.58651086704739e-05 2.45519850596303e-06 0 1.1326450373575e-05 0 XM_005218896.1 ZNF570 PREDICTED: Bos taurus zinc finger protein 570 (ZNF570), transcript 0.0 760 99.76 0.191836734693878 NM_144694.1 ZNF570 Homo sapiens zinc finger protein 570 (ZNF570), mRNA. 2e-139 500 89.01 0.172789115646259 TCONS_00083599_1 sp|Q96NI8|ZN570_HUMAN ZN570_HUMAN Zinc finger protein 570; 2e-62 203 86.49 0.785714285714286 1 coding 0 0 1 1 0.0374587480386941 0.754147108191686 0.0315854996981769 0.501475513721729 GCGAGCCTTCCGGGCTGGGAGCTGGTCTTCCGGCAGTTCGGTTCTGCAGACACTGCCATTCCCCAGGAGAAGAGTCAAGGGGAGTAAAGAATGGCTGTTGGACTTCTTAAAGCCATGTACCAGGAGTTGGTGACCTTCAGAGATGTGGCTGTAGACTTCTCCCAAGAGGAGTGGGATTACCTAAATCCTTCTCAAAGGCATCTGTACAGTAATGTGATGTTGGAGAACTACAGGATCTTGGTATCACTGGGACTTTGCTTTTCTAAACCAAGTGTGATATTATTGTTGGAACAAGGGAAGGAGCCCTGGATGGCGAAGAGAGAGATGACAAAAGACTTGTGCTCAGACTGGGAATCTATGTGTGAGACTGAAGAATTAACCCCAAAGCAGGACATTTATGAACCACAATCATCTCAGAAGCTAAAACAAGATTCCTTAGTAGACAAAGAAGAACATCCATGGAAAGCAGCAGGTCACAACTGGGACAACCTAAAAACTTTAGAATGTATGTAGGAGTGTTTTTACTATAGGCAAGTAATAGAAGTAGAACTATATAACACAGCTGGGTTTAGGTTTCTAAAGAGAAAGAATTAGATAAAGTAATTAAAGAAAATGAGAAAAATACAGAACTTCTATTTAGATCAAGCACGGAGAGTATTGCAGTTAACTCTAAAACCTCAAGAATTCATACTGCAGCATAAAAAGACATCAGTCCCAAGTAACAGTATGGGTTAATCTAGGTGATTTCATCTAAACTGTTTGATACTACAGAAAAAAAGACAAAGTTTATAAATTTTTATCAGGTGATTATAAAACTGAAATCAAAAGGGGATTGAGAAGAAAATTACAAACCACACACACACACACACATATATATACAGTTTCATTCATTCAGTGAATATTGAGTAGCTGCTGTTTGCCACACACTGATTTAGACAGGAGGAGACAACATGATCGATACAAAGACCAGATCCTCAAGGAGTTAATAGATTTTCTAGGTCCAGAAAACTGAAGAAGAATAAAATAAATCAAAGGGTATTATGTAGCCTAGGCTGAAGAGACTCAAGATAATAAAGTTGTCCGTTATTTCTGATTTAACAAATTCACTGCAATTCCAACAAAATTCCTCAATAGGCCTTTTTGCCCTTTAATTTCACATAAAATCTTAAAATTAGTCTATGAAGTGTGACTTCTAAAGAACAGCAATAAAATTATTGAACCAAATCTACTTGTAGAAAATTTGCATATGATAAAGATGGTTTAAATACCAGTAGAGAAAGGATGGATTTGGGAGTAGTAAAAGAATTGACAGTATACATCATGGCAGTGAGGGAAACAAAATCACAATGAACTATTTCAAAAGCATCACAGTACTAATTACTGGAAAGGTGTGGAGCAATAGAAATAATCATACAATGCAGTTGAAAATACAGTAAGTCCGCTACATACAAACCTTCAAGTTGCAAGCTTTCAAAGATGTGTATGTGCATTTACATGTCCAGTCATGTAAGTTAGTTTTCATGTCTGGCGTACCTCGTGACACGCGTCCATCCTCTACAAGTAGCTGTGCTTTTGTGTACTTCACAGTATAGAGCACAGTAGTACAGTATCTTTGTTTCAAGTCCAGGATGTCCAGAAGCAAGCGTAAAAGCAGGCAGTGATGTAGCTGATATCTTCTATTGCTGACAATCCAGTTCTACCATATCCTATTTCCCTCCTTCAGTCAATAAGTCTTGCCTGTTCCCTTGATGCCAGGCCCTGTATGCCAGCTGTTTTACTGTACTACTGTACTTTTCAAGGTACTGTACTATAAGATTAAAAATGTGTTCTTTATTTTTTGCTTTTTATGTATTATTTGTGTGAATAGTCCACAGAATTCTCGAGGCAAGAATACTGGAGTGGGTTGCCATTCATTCCCTTCTCCAGGGAAAGCTATTTCAGTAGAGTTCTATATAGCCAATTGTGTCAGTTGGGTACCCAGGCTAACAGTTGGACTTGGAAAAATTGGACTTACAAACATTCTCTTGGAACAGAACTCATTCCTGTGTAGGGGACTTACTGTAGTTTTTTAAAAAGAATTTGTCAATATCTAGTAAAGTTGAAGATATGGATACTCTTTGACCCAGAAATTCAACTTAAACCTCTACAGAGCCTCTTGGGTTCAGGGAGATGTACATGAAGACCCATTTCAGTGTTTGTAGAAAT EMBV3_16153 AAAGCCCGTGAGATCCAGGCCAAGCTAAAGTTTTGGCAAGGAGCTCTGCCAGGCCAAGCC Variant GeneID:526771|TEAD4:XM_002687882:60_cdna 482^610 1 EMBV3_04956 GeneID:526771 5 GENE TEAD4 NULL TEA domain family member 4 EMBV3_41183 TAACTCTGAGAAGTCGTCCTCTTCAGAAAGGTGGCTATCATCCAGTGAAAATTGGAGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42634 TGCAGCGATCGGCAGGAAGAAGAGGGGCTTGACTTCCTAGATCATCTGGAACCCAAATTT Gene GeneID:281127|DSC1:NM_174044:55_cdna Constitutive 2 NULL GeneID:281127 24 GENE DSC1 dg3 desmocollin 1 EMBV3_42657 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07710 TGTCTTCTCTGCCGTCTGCACGCAAGGCTTTTTAAGATGAAGGGGGAGACGCTTCGTTTC Gene BVT0102_325735 - 0 NULL GK000028.2:16197587-16620267 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00674 GCCAAACTGGGAAGAGTGTCTTTTATTCTCCCTCTTGAGCCCAAACCGCCCTTGAATGTC Gene GeneID:512512|DNASE1L3:XM_002696990:360_cdna Constitutive 0 NULL GeneID:512512 22 GENE DNASE1L3 NULL deoxyribonuclease I-like 3 EMBV3_25502 AGTGGAAGCAGGAGGGAGTCGCCAGTTTGGACAACAGAAGATACTCCTACTTGGTGTAAG Variant GeneID:524908|TTC27:NM_001075862:32_cdna 254^431 1 EMBV3_37865 GeneID:524908 11 GENE TTC27 MGC137883 tetratricopeptide repeat domain 27 EMBV3_42694 CTGAACGAGGGCGCGATAACACCCCTGGAAACCGGTACTTGAAACAAACACTCGATCTGT Gene GeneID:512596|A2LD1:NM_001075571:8_cdna Constitutive 0 NULL GeneID:512596 12 GENE A2LD1 MGC140053 AIG2-like domain 1 EMBV3_17447 GCCGTCCCCTGCCAGTCACTTTCCACCGAGGCCAAAGGCAGGATTGTGGTAATGCCAGGG Variant GeneID:535065|CUTC:XM_002698425:384_cdna 596^729 2 EMBV3_15531 GeneID:535065 26 GENE CUTC NULL cutC copper transporter homolog (E. coli) EMBV3_11221 TGAGGCCAGAGGGGAGAGGAATTCTCCAAAGTGCTTGTACAGATGGGGCTACTCAACTTA Gene GeneID:100124511|LOC100124511:NM_001102550:2_cdna UTR3_Alt 2 NULL GeneID:100124511 7 GENE LOC100124511 MGC143377 hypothetical protein LOC100124511 EMBV3_33346 GTGGAATGATGTGAGTTAAAAATGAATGGAGCATGGGCCTTCCTTGGTGGTCCACACACC Gene BVV0101_035871 + 0 NULL GK000003.2:44625973-44657521 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26467 CATGGTTCTGACAGCTTCTCCCTTCGTGAGCAAGGACAATGGACCCCCACCCCTCCCTAA Gene GeneID:513340|GNB3:XM_002687865:107_cdna Constitutive 0 NULL GeneID:513340 5 GENE GNB3 NULL guanine nucleotide binding protein (G protein), beta polypeptide 3 EMBV3_34685 TCATATCGAGATTGAGGGCAGAACAGGAAAGATCACGGACGCACTCCTAGGCCTTATGAG Gene BVV0102_352370 - 1 EMBV3_05500 GK000030.2:93096382-93117837 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245158 TCONS_00245149 TCONS_00245157 TCONS_00245156 TCONS_00245159 1 XLOC_150636 Coding TCONS_00245156 XLOC_150636 Coding Coding LOC100301478 X:93113430-93150673 j TSS184085 3327 1 TCONS_00245156_4 1054 9 0.910907040438215 0.053832815567265 0.0600339776948347 0.0404908238994986 0.0292151447034029 0.0360330624205975 0.0131523236047707 0.0181392957180308 0.0246504908788565 0.0380231710343836 0.00438740571854356 0.000220770979283271 0.00114667439139962 0.00459299986841296 0.0151146675175339 0.01051523969872 0.00397651185422918 7.68288189088253e-08 0.000579754581727371 0.0365280137181091 0.0471586029642717 0.0146640099035805 0.00103732195126611 0.00220280152161795 0.00184694734857141 0.0588640102768134 0.0430158863086224 0.0334808692402969 0.000516644033933889 1.95681960062628e-27 1.17372566170819e-23 XM_003584903.2 CCNB3 PREDICTED: Bos taurus cyclin B3 (CCNB3), partial mRNA. 0.0 3997 99.78 0.669972948602344 NM_033031.2 CCNB3 Homo sapiens cyclin B3 (CCNB3), transcript variant 3, mRNA. 0.0 713 76.30 0.281334535617674 TCONS_00245156_4 sp|Q8WWL7|CCNB3_HUMAN CCNB3_HUMAN G2/mitotic-specific cyclin-B3; 0.0 606 40.33 0.995256166982922 1 coding 1 1 1 1 -0.136405057837958 0.426221307525024 0.0270350877570422 0.615937582310513 CTAAATTGAGACGGACGCCGGTTGCTGCAACGCGGAGCTCCGGTCATTTCCCTGGCCTCATAAGGCCTAGGAGTGCGTCCGTGATCTTTCCTGTTCTGCCCTCAATCTCGATATGAGCCCTGCCTTGGATAGACGCTGCTGAATCTGTAAGAAATGCCGCTGCCACTACCATCCCACCACTCCAAACATGAGACTAGGAAATCTCAGTCCAGCATTGTGCCCAGTGATCGTGAACCATCTGAAAAGAAAGATGAGAAGTACCAAGCAAAGATATCTCCATCTTCACCTCAGGGACCACTCAAAAAGAGATCAGCTTTTGAAGATCTCACCAATGCTCCTCAAAGTCAACCTGTCCAGCCCAAGAAGGAAGCCAATAATGAGTTTGTTAAAGATACTTCCAAGAAGAGAAACAGGAACACATCTGCTAATAGGTTGCCTGAAAACAATAAGATGAATATAAAAAGATGTAAGGTAGAACTCTCACCAATAGTAGTGTCAACCACCATGATGCCAAATATTATAGATAATCTGCTCACTCTGGGTATGTCTACCAGCTCCAAGACACCCAATACTGAGGAAGCATCTCTTTTCAAAGAGCCATTCATTTTAAAAGAGGAACCCACTTCTGAGGATGCAGTCCTCATGAAGAGGTCATTATCTTCAAAGAAGTGCACAGATCAGGGGGTAGTGTCCCTCTTGCAGAAGCCACTGTCCTTGCAGGGGAAGAGTGACAGTGATGTTGTACAGCCAATGATTTTTGGGAAGAAGTGTAAAACCGAGGAGACAGCCATCACCAACAGGACATTATCCTTAAAGAATATGTGCCCATATCAGGGAAAGCAGTCCTGCTCAGGGGAGGAGTTGGCCTTGCACGATGTCAGTGTTGAAGAGGATTCTTCCTTTATGGAGCTCCAGAATGTTAGGAAGAAGCCTAAAACTGAGGAAGCAACCTTCACCAACCCATTATCATCTTTAAACAAAAAGTATACCACTCAGAGGAAGATGTCCTGTAGCAAAAATCCTCTAGTACTGCAGAAGACCACCTCTGAAGAAAAGCCACCACTTTTTAAGGAACCATTGGCTTTTAAGAAGCAATCTACCACTGAGGAGACAACCTTCACCATGAGGCCATTACCTTTAAATAAAAAGTGTACTACTCAGAGGAAGAGGAAGATGACCTACTCAAAGATGACCACCTCTGGAGAGAATGCATTCATTAGCCAGTTGCTGTCCTTTAAAAAGAAGCCGACCCCTAAGGAGGAGTCCCTCTTCCAGGACCTCTCAGTGTTGCAAGAGAAGCATACTGATGATGGAGCAGTGACACTTGTGAAGAAGCCATGGGCATTGCAGAAGAAAGATGATGAAGATGATTTTCTTATGGAGCCACTTTCCTTTAGGAAGACTCATACTACTAAGGAGGCAACACTTCCCAAGAAGCCACTACTTTTAAAGAGGAAGTGTACTACTCAGGAGAAGATGTACCACTTGAAGAAGCCACTAGTATTGCAGAAGGTCACATCTGAAGAGAAGTCACTCGTTAAGGAGCCATTACCCTTTAAGAAGCCGCCTACCACTAAGGAATCCCTTTTCCAAGAGCCATCAGCATTGCAGGGTAAGCACACCATTCTAGAGGAGGCATCCATCTTGAAGAAGCCCTTGGTCTTGCAAAAGATTCCAACTGAGGAGGAATCACTTAAAAAGGAGACTTTGATTTTTAAGAAGTTTACCACTGGGGAGGCAACCTCCACCAATATGCTGTTATCTTTAAAGAATAAGTGTACCACTCAGGCTAAGTCCTGTTTGACCAAGCCACTAGTATTGCAGACCATTTCTGAAGAGAAATCACTCATTAAGGAGCCTACCACTGAGGTGGAGTCCCTCTTGAAGGAACCATCTGCACTGCAAGAGAAGCACACCACTCAGGGGGATGTGGCCCCCTTGAAAAAGCCATGGGCATTACAGGAGAGAATAGACAGTAAAGATGAATTTCTTATGGAGCCACTATCATTTAGGAAGACACATACCACAAATGTGGCAGTCTCTACCAAGGAGTCATCATCTTTAATGAAGCAAACGTGTGCCACTCAAACACTAATGTCTATCTGGCAAGAACTGTTGGGGTTGCAGAATATGATTGGTGAAGGTAAGAATTCCTTTATGATGCCAGTATCATCTAGGAAGAAGTCTTCAACTGATGAGGCAGTTCTTACCAAGACACCATTATCTCCAAAAATGAGGCAAATCACTCAGTGGAACACCGTCATAGAGAAGACCACCTCTGAAGAGGAGTCACTCTTTAAGAAGTTATTTCCCTTAAAAAAAACGTCTACAACTGAAGAGGAGCTCCTCTTCCAGGGTCCATCTGTATTGAAAGAGAAACACACCTCTCTGCAACAGGCATCCCTCTCAAAGAAGCCATTGACCTTACAGGAGAATATCGCCACTCAAGAAGAATCATATATCAAAGAACTGTTGACCACGGAGAAGTCCTTAGTCTTGCAGAAGACCGATACCAAAGTGGACTTCTCGACGTCATTGGCTTTGCAGAAGAAAAGCACCACTGAAGAGAAATTCTTTTTCGAGAAACCATTGGTTCTGAAGGAAAAGCTCTCCCCCAAGGCAGCAGCCAGCATAGAGGGACAATCATCTTTTAAGAAGCAGCCCACTGCTCAGGGGGAGGTGTTCCTCTTGAAAAAGCAGTCGACCTTGCAAGAGAACATCACCAGTGAAGAGGAGTGCATTATTAAGCAGCCACAGGCCTTGCAGGAGAAGTCCAGCGTTGAAAAGGAGACGATCCTGAGGGAGTCCTTGGCCTTGCAGGAGAATTCCACGATTGAGAAGGACGCTGTCTGGAAGGAGCCATTGGCCTTGCAAAAGACTCTCGCTCACAAAGAAAACACCTTTCTCAAACATTGCACCCTGCAAATTGAAACCAGCCCAGATGTGTCCACCACCATCCCTGAATCTGGAACAGGCTTGTCCAACACCATCACCATGTCTTCCAGTATCATAAGCAAGTCCAGTACTTGTGAATCCAATTCCGATAAACCTTTCTCATCTTCCGACAAAAAATCACAGCAAGAGGTGATCCCACTGGGGAATACTGACATAGACTGCAGTGACCCATTTTTCAGCTCAGTATATGCTAAGGATATTTTCAGTTACATGAAGAAAAGAGAGGAAAAGTTTGTACTTAATAAATATATGACCAGGCAGACTGATATCGACAGTGACATGAGGGCCATTCTTGTGGACTGGTTGGTGGAGGTGCAGATATGGAAAAGAGTTGTTTTTGAAGAATTGGAAGGATATGCCTGACAAAGGCAG EMBV3_19539 AACTCTGGCCGCAACCCAGGTGGAGGATGGAATGATGGTGTTGACCCTTCCGACTTCAAT Gene BVV0101_085593 - 1 EMBV3_31533 GK000019.2:37932792-37978509 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099990 1 XLOC_060233 NonCoding TCONS_00099990 XLOC_060233 NonCoding NonCoding - 19:37976514-37976997 - TSS74366 483 1 TCONS_00099990_1 82 0.989648033126294 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.94052925186037e-06 0 0.000192997580281625 0 0 0 0 0 0 0.000998640621397356 0 0.000416513444525065 0 0 0 0.000417616809026918 3.01528147983154e-05 0 XM_005220561.1 PHOSPHO1 PREDICTED: Bos taurus phosphatase, orphan 1 (PHOSPHO1), transcript 1e-96 356 100.00 0.405797101449275 0 noncoding 0 0 0 0 -0.0103373446617683 0.921646181713898 0.0126731994329019 0.812929476457551 AAGAGAGGAAGAAGGAAAGATTTATTAATTAGAGCAAGCAAGGAGATCTTTCCCAAAGCAGTGTCTCTCTGATCAGCAAAACTGGAGAAGTTTTAAGCTAAGGGTACATGTGTTCTTGAAGGGGTTTGTCTGGTATATGAATATTCATGAAGGGGCTTGAGCAGAGGAGATTCAGCATAGAGTTGGGGCAAAGGTCAACAGAGTTCAAGCTTTACTTGATTGAAGTCGGAAGGGTCAACACCATCATTCCATCCTCCACCTGGGTTGCGGCCAGAGTTCCTGCAGAACTCAAAGATATGTATCAGATTGCTATGTATCCCTTGAGGAGGAACTTGGACTCTGTTTTATCACTGAACTATTTTTTCTTGACTGCTTTTCCTGTGTTCTTTCCTTAAGCTCGTTAATTACTGAGACCTATTAATGATAATCATTGTGGCCAGGCTAAGATCACAAAATGGCTTAGGAAAAAATAGCCTCTCAAAA TCONS_00093624 TCONS_00093627 TCONS_00093628 TCONS_00093629 TCONS_00093625 TCONS_00093626 . 5' 1513 TCONS_00093624 TCONS_00093627 TCONS_00093628 TCONS_00093629 TCONS_00093625 TCONS_00093626 . 5' 1513 EMBV3_28234 ACACGAAACTTCCAGGACTTTGACTGTCAGGAAGAGTTGCAGGCCAACCTGGACCTGATT Variant GeneID:514399|NDRG3:NM_001101996:1054_cdna 142^636 1 EMBV3_09775 GeneID:514399 13 GENE NDRG3 MGC165984 NDRG family member 3 EMBV3_03301 GCTGGCCTTCTTCAACAGCAGCGCCAACCCCATCATCTACGGCTACTTCAACGAGAACTT Gene GeneID:540577|NPFFR1:XM_002698905:82_cdna Constitutive 0 NULL GeneID:540577 28 GENE NPFFR1 NULL neuropeptide FF receptor 1 EMBV3_14419 GTAATTGCGTCTCCATGGGCTGTGAGACTGTGTGAAGCTGTTTGTGTAGTCTCCTTGTGG Gene GeneID:617808|LOC617808:XM_002694923:814_cdna UTR3_Alt 2 NULL GeneID:617808 18 GENE LOC617808 NULL hypothetical LOC617808 EMBV3_33859 CCCCCATCCAGTCCCTTAGGCAGCCATTGGCAGCATTTTAAGCATTCTTCCAGAGGTATT Gene GeneID:511281|ORC2L:NM_001101942:91_cdna UTR3_Alt 2 NULL GeneID:511281 2 GENE ORC2L MGC140463 origin recognition complex, subunit 2-like (yeast) EMBV3_28624 GCTTGAAGACCCCCTTGGACAACATCTCAATCACCAACTGCCTGCTTACAGAATCAGACC Gene GeneID:100337492|LOC100337492:XM_002699024:99_cdna Constitutive 0 NULL GeneID:100337492 29 GENE LOC100337492 NULL preferentially expressed antigen in melanoma-like EMBV3_07016 GATTTACGGTTGCACCATCCCTTAATTTGTTTCTACACATACCTAAGTAATTCACCAGTG Gene GeneID:407121|NEB:XM_002685358:243_cdna Constitutive 0 NULL GeneID:407121 2 GENE NEB NULL nebulin EMBV3_11194 AGAATGGTCAAAATAAGACAACTGAAAGGCAAAATGTGTGAATGTACAAACGTGAGACTC Gene BVT0101_011687 - 1 EMBV3_33042 GK000016.2:64426027-64648456 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00599 ATCGCTCTGTGAGATGGAGTCGAAAACCCTGGCTCACTTGCCGGTTGCCTAAGAACTGTT Gene BVT0102_081902 + 0 NULL GJ058438.1:1-32166 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43689 AGTTAACAGCAACACTATCCACTCTGCTGCTCAAGGCAAGAGGCCCAGGAGTCATGCTTA Gene BVT0102_078351 + 1 EMBV3_31791 GK000002.2:122170080-122194333 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33107 GTACTCAGGATCTGGGTCATAACTATATGTACTGGTACCGACAAGACCTGGGACACGGGC Gene GeneID:100300635|LOC100300635:XM_002687096:360_cdna Constitutive 0 NULL GeneID:100300635 4 GENE LOC100300635 NULL hypothetical protein LOC100300635 EMBV3_00412 CCTATATATTGGAGGATGTTTAGCAGCATCCCTGGACTTTACCCATTAGATGCCAGTGGC Gene BVV0102_211470 + 0 NULL GK000002.2:57213281-57777005 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03819 CACGACACTTTTATTGATTCAGTCAATTTCAGGTTTGGGGTGCGGCACTCCACCTGCAGG Gene BVV0102_415782 + 0 NULL GK000004.2:106891603-106935176 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182727 TCONS_00182736 1 XLOC_110941 Coding TCONS_00182736 XLOC_110941 Coding Coding LOC100300510 4:106918979-106923617 j TSS136494 878 1 TCONS_00182736_1 55 5 0.81173172309683 0 0 0 9.45712509912975e-06 0 0 0 0 0 0 2.60703956207512e-06 0 0 0 0 0.00458978584197534 0.000103999971259525 0.000738499633790982 0 0 0 0.000160889341121466 0.000548563012066784 0.00287151780354845 0 0 0 0 0.000215636830249133 0.000109562082984083 XM_003582150.2 LOC100300510 PREDICTED: Bos taurus uncharacterized LOC100300510 (LOC100300510), 0.0 1359 100.00 0.856492027334852 0 coding 0 1 1 1 0.0993214091538452 0.427294084017587 0.0304552665220549 0.545509818274932 AGCGCTGGGACAGGGGAAGCGAGCGGGAGCCTCTGGAAGCTGCGGGGGGGTTTGAGTGCGGGGCTCTTCTTCCGTGTTCCTATGAGCAGTATTTCGGCCCAGGCACCAAGCTCACGGTCTTAGATGATCTGAGCCGCGTCCACCCGCCCAAGGTGGCTGTGTTTGAACCCTCGGAAGCAGAGATCTCCCGGACCCAGAAGGCCACGCTCGTGTGCCTGGCCACGGGCTTCTACCCTGACCACGTGGAGCTGACCTGGTGGGTGAACAGGAAGCAGGTCACGACTGGGGTCAGCACGGACCCTGAGCCCTATAAGGAGGACCCCGCGAGGGATGACTCCAGATACTGTCTGAGCAGCCGGCTGAGGGTGACCGCGGCCTTCTGGCACAACCCCCGCAACCACTTCCGATGCCAAGTCCAGTTCCACGGGCTCACAGACCAGGACCAGTGGGAGGAGCAGAACAGGACCAAGCCCATCACCCAGAACATCAGCGCCGAGGCCTGGGGCAGAGCAGACTGTGGCGTCACCTCCGCGTCTTATCAGCAAGGGGTCCTGTCTGCCACCCTGCTCTATGAGATCCTGCTGGGGAAGGCCACCCTGTACGCTGTGCTGGTCAGCGCCCTGGTGCTGATGGCCATGGTTAAGAAAAAGGATTCCTGAGACCAGCTCCAAAAGTGCATCCCGAGTCATTCTTTATCGTGGCCCTGGATTCTCCTTAACATCTTTCCAGTCTGTGTTCCTCAAGAGTTTCTCTCTCTCTCTCATCTCCTTCCTTTACGGATGTCTGCCCCTTCTCTGAGCTTCCCTGCAGGTGGAGTGCCGCACCCCAAACCTGAAATTGACTGAATCAATAAAAGTGTCGTGATGGGCTTGATTGTG EMBV3_15245 AAGTCACTTCCAAGGGCAGATGGGACCTGCCCCTCCAGGACTCACTGGGTTCAGATCGTT Gene GeneID:514211|LOC514211:XR_084540:66_cdna Constitutive 0 NULL GeneID:514211 13 PSEUDO LOC514211 NULL similar to Uncharacterized protein KIAA1755 EMBV3_41925 CTTAGACACAGAAGTCCAAGGATCAGAAGAAGTGTTGATCCCACCAGACGGGCTCGTTGC Gene GeneID:506155|SGCG:NM_001075244:14_cdna Constitutive 0 NULL GeneID:506155 12 GENE SGCG MGC140045 sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) EMBV3_40293 CTGAGCACTGTGTCTGGTACTTAGGAGGTGCTGAACTAACTCTAGTATCCCTTCTTTGTC Gene BVT0102_168949 + 0 NULL GK000002.2:23330400-23377566 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37321 GCCGTAGACTTAAGCTTTTTCATTTGTTAGCAGTACCCATGACATTCAGTGGCCTTGTGC Gene GeneID:282658|ARPP19:NM_174705:18_cdna UTR3_Alt 1 NULL GeneID:282658 10 GENE ARPP19 ARPP-16 ARPP-19 cAMP-regulated phosphoprotein, 19kDa EMBV3_01005 CCCCTGTCCAAACCCAGACTCCTGTGTACAGATGCTATTTAGAGGGAATCAGAAAAATGC Gene GeneID:505992|INO80:XM_002690793:234_cdna Constitutive 0 NULL GeneID:505992 10 GENE INO80 INOC1 INO80 homolog (S. cerevisiae) EMBV3_17882 AAAGAGGCACTGAGCGAGGTCATTTCAAACCTGATGGCAGAGACAGAGGACAGGATTGCC Gene BVT0102_067219 - 1 EMBV3_26846 GK000006.2:71462047-71562164 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32713 CATCTCTTGGCCACTTTCCCACAAGCCCACGGATGCACATTCCCTCAAACACCCAAATTG Gene BVV0102_379698 - 1 EMBV3_29330 GK000007.2:70839762-70858270 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17824 TCGATGGCCTCAACAGCAATATGAGATATAATGAGCTATTACTGGGTGTTGGTCACCCTG Gene GeneID:282138|AKR1C4:NM_181027:11_cdna Constitutive 1 NULL GeneID:282138 13 GENE AKR1C4 AKR1C1 MGC137190 aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4) EMBV3_30484 GTCTACTTCCCGCCTATTTGCGGCCTATAGATTCGTGTGTCCCTTGAATACAAGAAAATG Variant GeneID:528135|HNRNPK:NM_001034562:40_cdna 129^207 3 EMBV3_05539 GeneID:528135 8 GENE HNRNPK HNRPK MGC127613 heterogeneous nuclear ribonucleoprotein K EMBV3_10152 AGGAAACTGCCAAACTTCCTATAAGTGAAGACTCTTTCCAACCGCCCAGAATGGGGGTGG Gene BVT0101_032277 + 0 NULL GK000011.2:92665482-92737260 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025888 TCONS_00025891 TCONS_00025892 TCONS_00025893 1 XLOC_014852 Coding TCONS_00025892 XLOC_014852 Coding Coding DAB2IP 11:92577650-92666901 j TSS18682 3682 1 TCONS_00025892_3 1068 15 0.958913165266106 0.00211610131220156 0.00149973084694313 1.02555517747257e-09 0.000224863234831972 0.0001994672950699 3.41924268900674e-66 0.000297197244448982 0.000347068835668414 3.56935124098407e-05 0.000383808959154382 0.000164376599789056 1.81421907196188e-05 0.000149914508835634 0.000220674427930316 0.000127497420155103 0.000931562334083282 5.82553775434034e-79 9.89953704539857e-05 0.000330328382860948 0.00213330454542024 0.00100629525261491 0.000297584428124694 0.000224973470358435 1.54722304111361e-15 0.00194055207237967 0.000594992160817503 0.00117317978643002 0.000152529048150721 4.59566985337834e-05 2.71788105723557e-05 NM_001144082.1 DAB2IP Bos taurus DAB2 interacting protein (DAB2IP), mRNA. 0.0 5640 100.00 0.848995111352526 XM_005251719.1 DAB2IP PREDICTED: Homo sapiens DAB2 interacting protein (DAB2IP), 0.0 4360 90.89 0.848995111352526 TCONS_00025892_3 sp|Q5VWQ8|DAB2P_HUMAN DAB2P_HUMAN Disabled homolog 2-interacting protein; 0.0 1965 96.57 0.9812734082397 3 coding 1 1 1 1 -0.139632131897789 0.275748467010544 -0.0626342495928585 0.365860243929739 ATGTCCGCGGGCGGCGGCGCCAGGAAGAGCACCGGGAGACCCTCCTACTACTACCGGCTGCTCAGGCGACCCCGGCTGCAGCGACAGAGGAGCCGCTCCCGCAGCCGGACTCGGCCCGCCAGGGGTAGGCGTCTCATCTGATGCCCAGGCTGAAAGAGTCTCGCTCCCACGAGTCCCTGCTCAGCCCCAGCAGCGCGGTGGAGGCGCTGGACCTCAGCATGGAGGAGGAGGTGGTCATCAAGCCCGTGCACAGCAGCATCCTGGGCCAGGACTATTGCTTCGAGGTGACGACGTCCTCAGGAAGCAAGTGCTTCTCCTGCCGGTCAGCAGCTGAGCGGGATAAGTGGATGGAGAACCTGCGGCGAGCCGTGCATCCCAACAAGGACAACAGCCGGCGTGTGGAGCACATTCTGAAGCTGTGGGTGATCGAAGCCAAGGACCTTCCGGCCAAGAAGAAGTACCTGTGCGAGCTGTGTCTGGACGACGTGTTGTACGCGCGCACCACGGGCAAGCTCAAGACCGACAACGTCTTCTGGGGCGAGCACTTCGAGTTCCACAACCTGCCGCCCCTGCGCATGGTCACCGTCCACCTGTATCGTGAGACTGACAAGAAGAAGAAGAAGGAGCGCAGCAGCTACCTGGGCCTGGTGAGCCTGCCCGCCGCCTCTGTGGCCGGCCGGCAGTTCGTGGAGAAGTGGTACCCGGTGGTGACTCCCAACCCCAAGGGCGGCAAGGGCCCCGGGCCCATGATCCGCATCAAGGCGCGCTACCAGACCATTACCATCCTGCCCATGGAGATGTACAAGGAGTTTGCCGAGCACATCACCAACCACTACCTGGGGCTCTGCGCTGCCCTCGAGCCCATCCTCAGCGCCAAGACCAAGGAGGAGATGGCGTCGGCCTTGGTGCACATCCTGCAGAGCACGGGCAAGGTGAAGGACTTCCTGACCGACCTGATGATGTCGGAGGTGGACCGCTGTGGGGACAACGAGCACCTCATCTTCCGGGAGAACACGCTGGCCACCAAGGCTATCGAGGAGTACCTCAAGCTGGTGGGCCAGAAGTACCTGCAGGACGCACTAGGGGAGTTCATCAAAGCGCTGTACGAGTCAGACGAGAACTGTGAAGTGGACCCAAGCAAGTGCTCGGCCGCTGACCTCCCCGAGCACCAGGGCAACCTCAAGATGTGCTGCGAGCTGGCCTTCTGCAAAATCATCAACTCCTACTGCGTCTTCCCCCGGGAGCTCAAGGAGGTGTTTGCCTCTTGGCGGCAAGAGTGCAGCAGCCGCGGCCGGCCGGACATCAGCGAGCGGCTCATCAGCGCCTCCCTGTTCCTGCGCTTCCTCTGCCCAGCCATTATGTCCCCCTCGCTCTTCAACCTGCTTCAGGAGTACCCCGACGACCGCACCGCTCGCACACTCACCCTCATCGCCAAAGTCACCCAGAACCTGGCCAACTTTGCCAAGTTCGGCAGCAAGGAAGAGTACATGTCGTTCATGAACCAGTTCCTGGAGCACGAGTGGACCAACATGCAGCGCTTCCTGCTGGAGATCTCCAATCCCGAGACCGTCTCCAACACGGCTGGCTTCGAGGGCTACATCGACCTGGGCCGCGAGCTCTCCAGCCTGCACTCGCTGCTCTGGGAGGCCGTCAGCCAGCTGGAGCAGAGCATCGTATCCAAGCTGGGGCCTCTGCCTCGAATCCTGAGGGACGTCCACACGGCTCTGAGCACCCCGGGCAGTGGGCAGCTCGCAGGCACCAACGACTTGGCCTCTACACCTGGCTCTGGCAGCAGCAGCGTCTCGGCTGGGCTGCAGAAGATGGTAATCGAGAACGACCTGTCTGGTCTGATAGATTTCACCCGGTTACCGTCTCCAACCCCCGAAAACAAGGACTTGTTTTTTGTCACAAGGTCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGCTCGAGTTACTCGGAAGCCAACGAGCCCGACCTTCAGATGGCCAACGGCGGCAAGAGTCTGTCCATGGTGGACCTCCAAGACGCCCGCGTGCTGGATGGGGAGGCGGGCTCCCCAGCAGGCCCCGACGCCCTCACCGCCGATGGCCAAGCGCCTGCCACTCAGCTGGTGGCCGGGTGGCCGGCCCGGGCGGCCCCCGTGAGCCTGGCGGGGCTGGCCACAGTGCGGCGGGCAGGCCAGACGCCCACCACGCCGGGCACGTCGGAGGGCGCGCCAGGCCGGCCCCAGCTCCTGGCACCGCTGTCCTTCCAGAATCCCGTGTACCAGATGGCGGCTGGCCTGCCGCTGTCTCCCCGCGGCCTCGGCGACTCGGGCTCTGAGGGCCACAGCTCCCTGAGCTCCCACAGCAACAGTGAAGAGCTGGCAGCTGCCACCAAGCTGGGCAGCTTCAGCAGCAGCACTGCCGCCGCCGCCCCCGAAGACCTGGGCCGGCGCCCTGGGGAGCTGGCACGGCGGCAGGTGTCGCTGACCGAGAAGGGTGGGCAGCCTACAGTGCCACGGCAGAACAGCGCCGGCCCCCAGCGGAGGATCGACCAGCCGCCGCCGCCACCCCCGCCGCCGCCCCCTGCGCCCCGCGGCCGGACGCCACCCACCCTGCTGAGCACCCTGCAGTACCCACGGCCGTCGAGCGGGACGCTGGCCTCAGCCTCGCCCGACTGGGCTGGGCCCGGAGCCCGGCTGCGGCAACAGTCCTCATCCTCCAAGGGCGACAGCCCCGAGCTGAAGCCTCGCGCCGTGCACAAGCAGGGCCCTTCACCCGTGAGCCCCAATGCCCTGGACCGCACGGCTGCCTGGCTCTTGACCATGAATGCGCAGTTGTTAGAAGACGAGGGCCTGGGCCCAGACCCCCCGCACAGGGATAGGCTAAGGAGTAAGGAGGAACTCAGCCAAGCGGAAAAGGACCTGGCAGTGCTGCAGGACAAGTTGCGAATCTCCACCAAGAAGCTGGAGGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGACAACCCAGAAGCTAGTGCTGGAGTACCAGGCACGGCTAGAGGAGGGCGAGGAGCGGCTGCGACGGCAGCAAGAGGACAAGGACATCCAGATGAAGGGCATCATCAGCAGGTTGATGTCAGTGGAGGAGGAGCTGAAGAAGGACCACGCGGAGATGCAGGCAGCTGTAGACTCCAAACAGAAGATCATTGACGCTCAGGAGAAGCGCATCGCTTCACTGGACGCGGCCAACGCGCGCCTCATGAGCGCCCTGACGCAGCTCAAAGAGAGGGTGAAGGAAACTGCCAAACTTCCTATAAGTGAAGACTCTTTCCAACCGCCCAGAATGGGGGTGGGGAACCCAGGGCAGAGCTCCAGGTGACCCCCACCCTGCAGAGCATCTGCCCCGGTGTATACCTCTCACCCCCTCCCACCCATCCGTCTGCGTAAGGCAGACCCCAGGGAAACAGCCCCTCTTTTTCTACACACTCCCCCAGCTCCCCTAGCCCCACTCCACCTCCCGCCCCGCCTTTTGTAAGTATGTGAAAAGGAAAAAAATGCAAACGTTGGAGTCTGGCCAGAGTGCCTCCCTCCAGCTGTGACTCTAACTATGTAATAATGTACAGAGAAAGTTGTTGGTGTTCTAAGACTGTGTGGCTGTGCAATTTCTGTACATTTGCAATTAGAAATATTAAAGATTTATTTAGCTATTTTAAG EMBV3_38697 GCAAAAAGAAGGGCAAATGTGGGGTTAGTGGAGGGACTTTATGCAGGTGACATGGAGAGG Gene BVT0102_165640 + 1 EMBV3_18174 GK000002.2:126622544-126676549 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18272 TGTGCCGTCTCCTATCCTCCCCTAAAGACCCTGGAACTGAAAAGTCTACAGAGCACCAGA Gene GeneID:404191|ANPEP:NM_001075144:80_cdna Constitutive 0 NULL GeneID:404191 21 GENE ANPEP APN CD13 P150 alanyl (membrane) aminopeptidase EMBV3_24479 CCGTGTGGGGATAACTTCTGCATCACCAAGGATCAGTTCACGTGTGGAGAGACAGTCCCA Variant GeneID:511579|DPH3:NM_001113299:5_cdna 199^273 2 EMBV3_20013 GeneID:511579 1 GENE DPH3 MGC138937 DPH3, KTI11 homolog (S. cerevisiae) EMBV3_40561 TATGGTGGCCAGCTGCTTTCTAGTGACCTCAGAGCGCATACTTTGTATCTCGATCTTAAC Gene GeneID:783019|DIRC2:NM_001101287:110_cdna UTR3_Alt 3 NULL GeneID:783019 1 GENE DIRC2 NULL disrupted in renal carcinoma 2 EMBV3_33840 TCTCACAGAACCTCTTGGAAGGCCCGCACCATCCCAACATTGAGGCCATACGAAATGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01344 TCCCAGTCCCTCTGTAGACACTCCTGGCTGCTGGACACCCTCTCTTTACTTGTGATGTGT Gene GeneID:505852|ARHGEF4:XM_002685223:133_cdna Constitutive 0 NULL GeneID:505852 2 GENE ARHGEF4 NULL Rho guanine nucleotide exchange factor (GEF) 4 EMBV3_01274 CTCGTAGTAGCTGTGGTGGCTGGAGCTGTGATCTGGAGGAAGAAGCACTCAGGTGAAAAA Gene GeneID:515712|BOLA:NM_001038518:135_cdna Constitutive 0 NULL GeneID:515712 23 GENE BOLA D18.5 MGC134453 MHC class I heavy chain EMBV3_37413 CATTTATACCAAGGCGAAAAATGGCTCTTGGGCTGCAGGCTATGGGATCTGGAACACTGC Gene GeneID:540514|ARSJ:XM_002688099:170_cdna Constitutive 0 NULL GeneID:540514 6 GENE ARSJ NULL arylsulfatase family, member J EMBV3_41680 ACATCATGGTGGCGTACTGGCGACAGGCTGGACTCAGCTACATCCGATACTCCCAGATCT Gene GeneID:617230|ATP5E:NM_001143741:1315_cdna Constitutive 0 NULL GeneID:617230 13 GENE ATP5E MGC133545 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit EMBV3_32436 GCATCAGATTGTGAAAATACCCATCAACCCATCATCTGCTCTGGGGGACCAAAGTGCTGG Gene BVT0102_242367 + 0 NULL GK000015.2:75567304-75693431 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065980 1 XLOC_040698 NonCoding TCONS_00065980 XLOC_040698 NonCoding NonCoding - 15:75654068-75655236 - TSS49723 1168 1 TCONS_00065980_2 94 1 0 0.00101343685209522 0.000146252973191531 0.000142613020583645 7.10972251006598e-06 0 1.2250215055092e-05 4.99290011229701e-06 0 0 3.17041288053819e-05 0 0 0.000483947628622848 2.41643742323165e-05 0 0 0 0 2.45579659323414e-05 5.54133606532447e-05 0 0 0 0 0 0 0.000275901542607716 0 0 0 0 noncoding 0 0 0 0 -0.119103173411693 0.309279417079773 -0.00793782588233929 0.906687446807769 AGGGAAGCCTGCCCGGAATAGCCCTGCCCTTGGAACCTGGGAGTGAGCAAGGGGCCCCCAGAGGGCTGGCAGGTCTACGTTCTACCTGTCGTCCCTGCCCACCCGCTTCACACCCAACCTGCCCCGAGAAGAGGAGCGGACTGAGACTCCGAGGGCAGCGGACGTCCACTTTCGAGTACCACGTGTGCGCTCAGTCTGCTCCCTGGGAAACCCTAAGATCTCTGATCCAGTAGAATTTCAGGTCTCCTGGTCCAACAGTCCCCAGATACATTCAGATGGCAGACCTCTGGGGTATCTTTACCCAGCCCGAGGCTGAAATGGCAGTATATGGATGAAAGTTCCAGACCACTTTTTAGAGGCATCAGTTCATCTGGAGTAGGATTTAGGACATCTTGGGTTGATCCAGCAAAAACTGTCCCCCGCCTCCTTTCAAAACTGCCTCGTCAGCCGGGAAACAGCTCCCTGAATTACTGAATGAATTTTTAATGGTCTGGGGCCGGGCTGGGGTTGGAGGAGGCAGAATGGAGATAGAGCACAGGATAAACTTGTAAGATGAGGGTGTCAGCCCAGGAGATTCCGAGGGGGCCTTGCAACTTAAAATCAGGAGAGTCTGACATTTCAGGGTGCTAGGCAACCCTGTCTGTCTTCCATCCAGTGGGGGGCACCTCCCCTGGCCATGTCTTGCTCCGCTTTGCCCCTGCACAGCAACGTCAACCAGGAGCCTGTCAGCCATCAGACTGTGGCTTGGGGACAGAGATGGTGGTGTTGGTGACCAATTCCTGCTGGGCTCCACATTTCTACCTGCAAGCTTGCACACTAGCTTTCTCTGGATGTCTGTCTAGCTTCCACTGTCTCTGTTTTCCTGGGCAGAGCAAATGGTGGCCCCTGTTAGGGACCCCTCTTTCCAGAGGGCTGCTTTTCTGGTCTATTTCATCAGCCATTGAGAAGGAAAACCAGGAACATTTGTTCATGCTCAGCTGGGACACAGCAAAGGGAGGGGGCCCTTTGGAAGCCAGCACTTTGGTCCCCCAGAGCAGATGATGGGTTGATGGGTATTTTCACAATCTGATGCTGTTAAGTAACCCACCAGCCTGGGCTCCTCCTGCTGCACGAGCTGCCACCTTGGACCCGCATCAGTGCTCTGCCCTGGGTGGTTGGGGGATAGAGT TCONS_00060062 TCONS_00060063 . 3' 86766 TCONS_00060062 TCONS_00060063 . 3' 87933 EMBV3_13097 GTCACAAAAATTATTAAAAATAAATATATGAAGTTTGCTTTAAAAATAGTCTTTTTTATG Gene BVV0102_130069 + 0 NULL GK000007.2:11340242-11439933 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36424 TAGACTTGACTCTTGGGAACTCTGTTTTCTTGGCCCAGCACTCATGGTGGAGGAGACGCT Gene GeneID:520070|LOC520070:XR_084670:244_cdna Constitutive 0 NULL GeneID:520070 29 PSEUDO LOC520070 NULL similar to Tumor endothelial marker 1 EMBV3_30386 TGGGATGCTTGCCTTGTGGAAGCTAGGGAGGCGTTGTTACTTTATGCCTGTGGTGTGAGT Gene GeneID:505438|ARFGAP2:NM_001080227:36_cdna Constitutive 0 NULL GeneID:505438 15 GENE ARFGAP2 ZNF289 ADP-ribosylation factor GTPase activating protein 2 EMBV3_39484 CCTAGGAAAGGGGTGAACCTTAGAGTAGCACTATCTCTCATGGCTGGGATGGAACAAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30549 GCCTTGCAAAACTGAAGAAATCGAGGACAATCGGCTCACAGCTGGGCGAAAGGATGCCAA Gene GeneID:100300871|LOC100300871:XM_002695327:39_cdna Constitutive 0 NULL GeneID:100300871 18 GENE LOC100300871 NULL similar to ribosomal protein L38 EMBV3_03580 GGATGCCAAGAGCCTTCCTCACTAGTAGTTGTAAATGCTAAATCTATACTTGACTTCACC Gene BVV0102_372465 + 0 NULL GK000003.2:33961479-33964963 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169505 TCONS_00169507 1 XLOC_103386 Coding TCONS_00169505 XLOC_103386 Coding Coding GNAT2 3:33944622-33963078 j TSS126902 3347 1 TCONS_00169505_5 354 0.157155661786675 10 0.819181793551883 1.56372830313816e-05 5.28989728826281e-05 2.15852678719315e-05 1.62091298698193e-05 2.97674565791071e-129 9.70798114400105e-05 8.33788149445272e-127 8.63089216755252e-05 1.44711790109114e-128 5.34335856171182e-06 7.87547853179035e-06 6.40994078573051e-06 1.63473198384968e-05 3.92551509906516e-104 3.74153285364246e-35 0.000430497082110706 4.38401646344248e-06 0.000592907402419764 2.8742341836019e-05 4.04653143449202e-05 0 1.22069324198517e-05 7.71688651046505e-05 8.16603886458569e-27 2.29144325059397e-107 4.11294601321172e-06 5.83522672572087e-07 1.29999442255371e-41 7.7598195434259e-05 7.0764880921941e-21 XM_005204072.1 GNAT2 PREDICTED: Bos taurus guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 (GNAT2), 0.0 3009 100.00 0.498057962354347 NM_005272.3 G protein Homo sapiens guanine nucleotide binding protein (G protein), alpha 0.0 1676 90.71 0.362414102181058 TCONS_00169505_5 sp|P04696|GNAT2_BOVIN GNAT2_BOVIN Guanine nucleotide-binding protein G(t) subunit alpha-2; 0.0 733 100.00 0.997175141242938 2 coding 0 0 0 0 -0.00441662856957842 0.965468026286943 -0.0394212022290067 0.428356445648808 TCCAAGGGCCCCTGCCCTGGCACTGAGATGGGAGAAGTAAGACAGTCTTTCAAAATTGCTGGCTGGTTGGAGGCGGGCAGGCCACGTGCTCCCCAGAGCGGGACCCGGAACTCGTCTGGACTTCTCTCCACACTTTCACGGTATTCGGGGTCGGATTCCGGTAGCTGGACCGTGAGGAAGTCACGCAACAGATAGGAAACCCTGGAGGAGAAGCTTAAGGGCTGGAGAAAGCTGCCGAGGAGGAGACGGATGAAAGATGGGGAGTGGAGCCAGTGCCGAGGACAAAGAACTGGCCAAGAGGTCCAAAGAGCTAGAAAAGAAGCTGCAGGAGGATGCTGACAAGGAAGCCAAGACTGTCAAGCTGCTATTGCTGGGTGCTGGGGAGTCAGGAAAGAGCACTATCGTCAAACAGATGAAGATTATTCATCAGGATGGCTATTCGCCAGAAGAATGCCTGGAGTACAAGGCCATCATCTACGGCAACGTGCTGCAATCCATCTTGGCTATCATCCGGGCCATGCCCACACTGGGCATTGACTATGCTGAAGTGAGCTGTGTGGATAATGGGAGACAGCTCAACAACCTGGCTGACTCCATTGAAGAGGGCACCATGCCTCCTGAGCTAGTGGAGGTTATCAGGAAGTTGTGGAAGGATGGTGGGGTGCAAGCCTGCTTTGACAGAGCTGCAGAGTACCAGCTCAATGACTCAGCATCTTACTACCTGAATCAATTAGACCGAATTACGGCCCCTGACTACCTCCCTAATGAGCAAGATGTGCTACGATCCAGAGTCAAAACCACAGGCATCATTGAGACTAAGTTTTCTGTCAAGGACTTAAACTTCCGGATGTTTGATGTGGGAGGGCAGAGATCAGAGAGAAAGAAGTGGATCCACTGCTTTGAGGGAGTCACCTGCATCATTTTCTGTGCAGCCCTCAGCGCCTATGATATGGTGCTGGTGGAAGATGACGAAGTGAATCGTATGCATGAGTCACTGCACCTGTTCAACAGCATATGTAACCACAAGTTCTTTGCGGCCACTTCCATTGTCCTCTTTCTCAACAAGAAGGATCTCTTTGAGGAAAAAATCAAGAAAGTCCATCTCAGCATTTGTTTTCCAGAGTATGATGGGAACAACTCTTATGAGGATGCAGGGAATTATATCAAGAGTCAGTTCCTTGACCTCAACATGAGAAAAGATGTCAAAGAAATCTACAGTCACATGACCTGTGCTACAGATACACAGAATGTCAAATTTGTATTTGATGCAGTTACAGATATTATCATCAAAGAAAACCTCAAGGACTGCGGACTCTTCTAGTTCTCACCATTTCTCAAGTATGTTCTATAAACAGGCTCCGAATCTCGTTAATTTTAAGCAGAAAATTTAAGGTCAATATATTATTGAATCCATAAGAATGAATCCATCCTCCCTTGGAAATGGAGTATGTATGATTGCAACTGTGTCTCATTTGGTCTTTTAAAAGCGGGATAGTTAGCACAGTTTAAAGAATGCAGGACCAGGAAATCAGAAGACCCAGGATCCATTATTGGCTCTGCAACTTACTATTGATGCAAAAATGTAAATATTTCATTTGTCTGAGCCTTGAGTCCCTTATCTATAAAATGAAGGTAATTTCTCTACTACTTCACAAGGTTACTTTAATGATCACAAACATAACTGAAGGCAGGCACATAAAAACTGTGTGGTGACACAAAGAAATCCTATGTTAAAGCTCCCACTAATGAAATTCAACACCAAAGTTTAGATGAATTATCCCAAACAAAAAAGCAAACCTTCCCTGCAATCTGCAAAAAAACTTAAATTAGTTAAAAACAGAATTTCAATAAACCTACCACCCTTTTTTACTATAAGACCTTTATGTGCCTTAGCTAAGAGATCTGAATCACCAGATGGATGTCAGTTTGTGAGCTCTAAGGCACACATCCAGTTTTTTTTTTTTTTTTTCCTGTTTTTTTGGCCACATGGCTTGCCTTGCAGGATCTTAGTTCCCCAACCAAGGATTGAACCCAGGCCCTGGTCAGAGTCCTAACCGCTGGACCGTCAGGGAGTTCCCCAAAATGATTTTCATTAAATCATATTATCCCTCTGCTCCCAAACTGCCAAGCTGTGTTCCTATATCTCTGTAAGTACAGGGATACTTATCTAAGTAACTCTCTCAGCTATATAAGACACTTTCTGAATGAACCTGGAGGACAGAACACACTCCCACTTGGAGTATTAATGATTGTGTTGCTGCTACTTCTCTGTCACAGAATTTAGAACAAGTGAGCAATCCTAAAATCCTCATTTCAACTGCTACATGTTTCAGAACAAAAAAGGCAGCTGATTTTGCTTTAGGCACTGAAAATTTTTGCAGTTGGATCCATGTGATGCCTGGCTGAAAACAACATCTCCCCAAACAGGCCAACAATTAAATTATCCCTTGAACTCCTTTGAGGGGAAACAAAGCTTATATTTATCTTGACAGGAGGTGGTGAAGTCAAGTATAGATTTAGCATTTACAACTACTAGTGAGGAAAGCTCTTGGCATCCAAGATTTAGTATATAAGAGAAAGTGTCAATTAAAATGAAAATCTGCTCCTTGCCAGAAAAACACATTCACACTTAGGCTACTACTAGCAATATTGATACTAGAGAGCCATATGAGCTTGAAATACACTGAAGAATAAATTTGCAGGTGTTAAAATTGGATTCATTTAATAGTCTTTCTGATTCTTTGAAAAGAAACCAACTTGGGAAAATTACCAGGGAAATAAGGAAAACTACTGTCTACTGCCGATTAAAAAACTTAAACTGAAGGAAAAAAATCTGGGCAAGATTTCTTGTATCCAAGCACTGTTCAGGGACTATTCTAAAGGGCACGCTCTAATGCTCACTAACCTCTCTGCTTTAACTCAAGTTATAGGGGTTCCAAGGTGTTTTGTTTTTTTTTTTCCTTTTGGTATCATAAATCCCTCTAGCAGTCTGATGAAGCCTATGGGATCTCTTTCTCAGGATACTTCAAAATGCATAAAACAAAACTCAGAGAACTACAAAGGAAACCAACATACTGAACCAACAACAGTTGTATCTTTGGAGTTCTGAAGCCCCAGGTTAAAAATTTTGCTACAGCTATGATCTCAGCTATTCAAGGCCCAAATGTAGTTTTCCCATTTATTCCACCTTCAAGTAGGGTAACCCCACCTACCCTCAAATCACGGCAAATTGTTTGCTTTTCTAAATTATCTTTTCCTTGATCTTTGACTCTAGGCAGGAATTGGTTATAGGTCAAACTACAGAAGCCCAACACAGACTCCTTGGTTATTAATGTTCATATAGAACT EMBV3_38145 TTGGGGCTGAATACAAAGATATGGATTCAGATCTGCCTCTCATGGCCCTCCCCCCATGCC Variant GeneID:507631|TYMS:NM_001037816:56_cdna 553^654 2 EMBV3_02573 GeneID:507631 24 GENE TYMS MGC134366 TS thymidylate synthetase EMBV3_31020 GAGAAGAACATGCCAGATGAAGAGAAAAAGGTAAACTAAAAGATCTTGGGAACTTGGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30822 ACAGCAGTCAAAGTGGATCTACAGCTCCAAACCCCATTCCTTCTGGATTTTCGTGCTGGC Gene BVT0102_376804 - 1 EMBV3_02041 GK000013.2:30527983-30604487 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042446 TCONS_00042442 TCONS_00042435 TCONS_00042433 TCONS_00042436 TCONS_00042447 1 XLOC_025667 NonCoding TCONS_00042446 XLOC_025667 NonCoding NonCoding - 13:30540381-30542348 - TSS31590 1032 1 TCONS_00042446_1 50 0.476744186046512 2 0.476093591047813 0.00250588123177829 0.000246234222732546 0.000472197981010287 0.000674768921800212 0.00146114518878533 2.36287062526565e-09 6.39332062640274e-17 0.00215166439858723 0.00117461512708336 0 0 0 0.000115965949552377 4.1023161229471e-05 2.1379288787256e-05 0 0 0 0.00122432790387469 0.00163077324122154 0.000128091437279873 0 0 0 1.38352312843434e-19 0.000239350685038436 0.000343898735634365 0 0 0 XR_227490.1 LOC101901993 PREDICTED: Bos taurus uncharacterized LOC101901993 (LOC101901993), 3e-116 423 100.00 0.22577519379845 0 noncoding 0 0 1 1 -0.109318347485922 0.350425619257768 -0.000504413942626764 0.994849837388045 CTCTGGATGGAATCTTGTAGCAGACAAAGGACTAGGTAAAAACTGAAGACATCTGAATAAGACCCTGTCAGCTGCACAGTTCCAACAGCAGTCAAAGTGGATCTACAGCTCCAAACCCCATTCCTTCTGGATTTTCGTGCTGGCCGCCAACCAAGAACTGGCTCCAGCTGTACTGGCCCCTAATTTCTTTAACTCTTTCCTCTTCTTTATTCTGGTGTTGAGAGAGCAAAGGAGATTCATTTGCAAGTATTTATTGAGCACCAGTCACTGAGGACAGCAGTAAATAAGGCAGGTGAGGTCCCTGCCCATAGAAGCCACATTCTGAAAGATGGATAGCATCATGGCACACTTATTACTGCTAGAAGAGTTACTTGAATGAATGTTTTCATTAGTCCTGATGATGGAGATGCTAATTGTTATTCTCATTTATGAGACATAGACGCCAAATGACTTACCCAACATCAGGCAGCTAGTTAGTGATGGAGATACAATTATTTTCTTTTACTGATTTTATTTATTTATTTATTTTTGGCTGTGCTGGGTCTTCGCTGCTGCACGAGGTTTTCTCTAGCTGCAGTGAGGGGGGGCTTCTCATCGCAGTGGCTTCTCCTGCTGTGCAGCATGGGCTCTAGGGTGCGTAGGCTTCAGTAGTTGTGGCTCCCGGACTCTAGCGCACAGGCTCAGTTGCCCTTGGGCATGTAAGATCCTCCAGGACCAAGGATCGAATCTGTGTCTCCTGCTCTGGCAGGCAGACTCTCCACCACTGAGCCACCAGGGTAGTCCCTGGAGATACAACTTAAATCAAAGGTCTCAGATTCCAGAACACTTGGATTCCTAACCATGATAATATCCATAAAATTGTTCTTTTGCGTAGATACTGTCTGATTGCTGTCTTGCTCTTTCCACTCTTAAAAGTATGCTGCTTCTAAAAAAATATCTGTAATGTCTAATGACAATTATAAAAATAAAAAGTGGCTTTTTTTTTTTTTAAGAAAATGGTGCCATTCGCATTCAATAGTTGCTTTTGTAGCA TCONS_00044920 TCONS_00044921 TCONS_00044922 r 5' 12400 TCONS_00044920 TCONS_00044921 TCONS_00044922 r 5' 12400 EMBV3_17231 CAGGAACGTTGCACGATGCATTTGTGTAAGCGACCACAGACTACCTGAGCCTCAGATCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11534 TCATGGCTCAACCAGACCCCACACCGAGCTGGCCACACTTGAGAACCTGATATTTTTGTA Gene GeneID:515911|STRA6:NM_001075730:97_cdna Constitutive 1 NULL GeneID:515911 21 GENE STRA6 NULL stimulated by retinoic acid gene 6 homolog (mouse) EMBV3_09009 GAGCTATGACCAACCTGAGACAATGCTCAACCTCAAAACTCCTGGAAGCATGCACTTTCC Gene GeneID:280705|TF:NM_177484:4_cdna Constitutive 0 NULL GeneID:280705 1 GENE TF MGC139350 transferrin EMBV3_17449 TCTCGACGAAGTGTATATTTACAGAATAGCTTATAGCCCAGGCCTTCAATGTATAATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38125 GAGACCAACATCCTGGTGGCCAACAGCAGCAACTCCAACGGGCTGAAATTGGACCAGACA Gene GeneID:522265|SLC30A1:XM_002694265:259_cdna UTR3_Alt 2 NULL GeneID:522265 16 GENE SLC30A1 NULL solute carrier family 30 (zinc transporter), member 1 EMBV3_36063 GTGGCTGCCTGGATTATTGGCCTTATCCACTCCGTGGTTCAACTAGCTTGCATGGTAAAC Gene GeneID:788790|LOC788790:XM_002690716:380_cdna Constitutive 0 NULL GeneID:788790 10 GENE LOC788790 NULL similar to olfactory receptor 1306 EMBV3_03104 CGATATGTGTAAGTCGATACAACATCAAGACCAAGTGTGCTTTACCCCCAGCAATGCAGG Gene BVT0102_334756 + 0 NULL GK000029.2:50187349-50218483 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25853 ACCAAACATCTGCTCCTGTGATTGTCCTGTGAATTACCCCTCTCCCCTTTGAAGCTCCAG Gene GeneID:522186|YIPF7:NM_001103258:17_cdna UTR3_Alt 2 NULL GeneID:522186 6 GENE YIPF7 MGC155290 Yip1 domain family, member 7 EMBV3_10968 TTCCGACCTGGGGCGCCGGTTGGAGACATGATTGCAATGCGGGCCTTAGGATTTGAGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21650 TCTGAATCTCCCAGGCTGTCTGTTCCGAGGGTGGATTGAGATCTTAGGAAAAACCAAGGC Gene GeneID:503625|PLA2G2D4:NM_001012687:66_cdna Constitutive 0 NULL GeneID:503625 2 GENE PLA2G2D4 NULL calcium-dependent phospholipase A2 PLA2G2D4 EMBV3_22136 CCTTCAGAGGAAGAATCAGGACCTCAAGATGAAGGTGGAGATGATGTCAGAAGCAGCCCT Gene GeneID:534624|CLIP1:XM_002694485:340_cdna UTR3_Alt 3 NULL GeneID:534624 17 GENE CLIP1 NULL CAP-GLY domain containing linker protein 1 EMBV3_14975 CTGAAGTACCCGAAAGTGATGGAAACCTGAGTGAAGTACCAGAAAGCAGTGTCAGCGACA Gene GeneID:616597|RAD9B:NM_001035479:273_cdna UTR3_Alt 2 NULL GeneID:616597 17 GENE RAD9B NULL RAD9 homolog B (S. pombe) EMBV3_02741 ACATGTTTGACCTTAGACATCAAAACCAGATTATTCCGAGTGCATGCTGCAGAGTGACTC Gene BVT0102_125514 + 0 NULL GK000009.2:39627077-39647513 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00240091 1 XLOC_146755 NonCoding TCONS_00240091 XLOC_146755 NonCoding NonCoding - 9:39640140-39641794 - TSS179769 1654 2 TCONS_00240091_1 37 0.120918984280532 1 0 0 0 0 0 0 0 0 0 0 3.98016024110536e-05 1.38402892244153e-06 0 0 0 0 0.00116568738373081 6.02260394479517e-05 0.000182037996216897 1.3006530660919e-05 0 0 0.000262459528655661 0.000632309679740099 0.000304075110231509 0 0 0 2.90362223030312e-05 1.17402699987105e-05 7.99694772156825e-05 NM_001205769.1 CDNF Bos taurus cerebral dopamine neurotrophic factor (CDNF), mRNA. 2e-25 122 72.81 0.119105199516324 NM_001114332.1 Slc16a10 Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 10 (Slc16a10), transcript variant 1, mRNA. 1e-28 132 77.53 0.100362756952842 0 noncoding 0 0 0 0 0.133680920514998 0.596644025394427 0.0672828527971041 0.231335155120601 TAGACATTTGCTAAAAAATTTTTATTAACTGAGAATATCATATTGTTTCACAGTAAAATGATTTTACCCTCCAAATGATTACAAAGCTCTTTTTCATTAAAAACATTTTGTTTATCTATATTAAATTGAACATTATAAAAAATCAATTATAAATTATACTCTTTAAAAAGAAACATAAAAATTTTTAAAAGGCAAGTACTAAAACACTGCACACTGATCAAACCCAGCATAATCATTTCACATAAGTGACCTATATTTAGACAACTCCTATGCCAAAAATGGCACCCTGTGTAGACAGAGCAGAGTCACTCTGCAGCATGCACTCGGAATAATCTGGTTTTGATGTCTAAGGTCAAACATGTTTTCCTAACTTCGAAAATATGCAAAATAATTTAAAAATTAGTTTTCAGTTAAACATTAAAACAAGTTGACAAAAAAAGTGTCTATTAGGAGATACTTAAAATATCCAAGCTCTCTCTCAGTAATACTGCAGGGTTCAGTCTGTCATAGCTGTAACTTTCAAGCTAAGGTAAATTTGTAGGAGAACAGAATGACAAAATTCAAATTTATCAAGCATTGGGCAATGCCTTAATAATGTTATAGTTCTCAAACTACAATATTACAACAATTACATGAGAAGTTATTACTAAGGGGATATTTCATCTCACTCCACTGTAACTTTTTTTTTGAGTATCGTTGGTTTACAGTGTTGTGTTGGTTTCTGCTCTACAGCACAGTGAATCAGTTATACATATACATAAATACATTCTTTTGTAGACTTTTCCCATATAGGTCATTACAGTATTGAGTAGAGTTCCCTGTGCTATATTAGTTACCTGTGTTATATATGGTGTTATGTATGTCAATCCCAATCTCCTCCCTCTGTAACTTCTGATTAACAGGCCCCCATTCTCTTACATACAAATCATGTTAACAGTAGAATGGAATTATCATTTGTTAACAGTGAATCCAGTATATTCTAGTAGATTCTAAATGTTTGGTTTTCCTAATTAGAAAAATGATAGTATTTTTCTAACTTACATTTTTAATATCTTCACAAAAATAGAGTTAAGGCAACATCTATAAAGACAGCAAGGTTAAATACAAATCTGTGGTCCCCACTTCCTCTGAATCCTACTCGCAGGTACCTTAGGGACTCAAGAGACCTGCATGGAATCTGGGGTAGAGTTCTGGTGCGAGTCACACAGTCAGCCACAACCATGATGCTCAGAGCCAATCATAGGTCTGAGGTTTGCTGACTCTGCCCCAGACATAGTTGTTTCTAATCTAATTTCTTTATGTTAAATCTGAAAGATGGACAATGATATTTTAAGATTGATGGTTCCCAAAACTCTAAGCCTGAAAAATAGCTTAAGTTATATCCTTAAGCCCAACAGAAAGCTACTTCGTGTTTATGTGTGTATATAATACATATACACACACACATACACACACATATATAATTATATATATAATAAAACATGACTTTTTTCACATAAGAGTTACAGAATACTTTGAATAGCTAACTTCATGCTAGCAACATTGACCAGGGACTTTTCTTTAGTCATTACCTTTGGGGGCTATGTTCATCATTAAGTTTTCATTTGGTGATCATTTTTTTGAGTTTTGTACCCTAACACCTTCTGTATTAACA TCONS_00237095 TCONS_00237096 . 3' 176 TCONS_00237095 TCONS_00237096 . 3' 1829 EMBV3_26373 CAACAGTGTTTTAAATTCCTACAAACCAAGGTGGAGCTGTCCATGGAGGACATAGAGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03835 TCAACGGCTCCCACGAAGCCAATATGTTAAGCCAAATTTACAGATGACTGCAAGTTCAGG Variant GeneID:536771|FGF5:NM_001078011:7_cdna 362^465 1 EMBV3_31329 GeneID:536771 6 GENE FGF5 FGF-5 fibroblast growth factor 5 EMBV3_20384 AGACCCTGAGAGAAGGGTTGATGAGGAGCAAGCTGGCTCTTCAGACTCCTCAGAAACCTT Gene GeneID:524284|AMIGO1:NM_001101119:125_cdna Constitutive 1 NULL GeneID:524284 3 GENE AMIGO1 NULL adhesion molecule with Ig-like domain 1 EMBV3_14964 TTGTGAGACCTGCGGGGCCGGCGGCCATGGAGGCCATGAAGAAAGATGGACTAGTGGGCA Variant GeneID:615565|FIS1:NM_001034784:299_cdna 65^406 2 EMBV3_29735 GeneID:615565 25 GENE FIS1 MGC127603 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) EMBV3_06267 GACGGGTTCATGACGCACTACCTGAGAGAGATTGCCTTGGATTGCCCAGCTGAGCTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01150 GAGAACAAAGACTCTCTCCACTCCAACACAGCCAACCGCAGGACCACCCCTGTATGAAGC Gene GeneID:286800|CACNG2:NM_001077832:164_cdna Constitutive 0 NULL GeneID:286800 5 GENE CACNG2 NULL calcium channel, voltage-dependent, gamma subunit 2 EMBV3_29780 ACCTCAACGCCCCCGATCTCTATATCCCCATGCTGGCCCTGCTCCTGGGCATCTACCTGG Variant GeneID:506336|YIF1A:NM_001034269:521_cdna 595^714 4 EMBV3_15030 GeneID:506336 29 GENE YIF1A MGC127000 Yip1 interacting factor homolog A (S. cerevisiae) EMBV3_29092 TCCTGCTGGCGTCGGGAAAACCACACGGGCCAAGGGGCTCAACCACAGGCGGACGTGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29966 ACACTCCTGTTGAGTGCAGCAGAACAACTCCGTGTTCAGAGTCAATGTATTTGGGAGGGC Gene BVT0102_335909 + 0 NULL GK000010.2:87747765-87853103 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018346 TCONS_00018347 1 XLOC_009226 Coding TCONS_00018347 XLOC_009226 Coding Coding - 10:87841263-87850293 - TSS12355 1376 2 TCONS_00018347_6 93 3 0.847934433492081 0.000139051347864988 3.6843043452666e-08 1.89266921772537e-08 2.07254059380986e-07 4.20149984367164e-10 3.19660641743984e-06 1.79392307894279e-09 0.000330975223260569 4.41093478310904e-09 0 1.63060451010823e-07 0 3.71750553303465e-09 7.73625109005821e-10 0 5.27137427540186e-08 9.82483882590415e-07 0 0.000243762393556337 0 1.71944520651643e-05 3.23484121067816e-05 0.00050002707494913 0.000105061212935373 4.62506366927304e-06 0.00014455638781647 5.99326656901728e-05 0 6.05489132260141e-09 4.36055487416199e-06 XR_232508.1 LOC101902488 PREDICTED: Bos taurus uncharacterized LOC101902488 (LOC101902488), 0.0 1566 92.54 0.775436046511628 NM_007176.3 C14orf1 Homo sapiens chromosome 14 open reading frame 1 (C14orf1), mRNA. 2e-17 95.1 73.01 0.117732558139535 TCONS_00018347_6 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 5e-19 82.4 44.33 0.978494623655914 1 noncoding 1 0 1 1 -0.095100471900682 0.570446828716994 0.00976451440038785 0.890261091544383 TCGTTCTGCTGGAAGCCATGGGTCTTGGACCCCTTTACTGCTAATCAGCGGTTGCAGCTGTCCAAGCCTCAACCCCAGTACTCAGCCCTTGCAGTGAACACTCCTGTTGAGTGCAGCAGAACAACTCCGTGTTCAGAGTCAATGTATTTGGGACGGAGGGGAAAAGAGCGGATAAAAGAATTCAAGACTCCTGTGAAGACCTGCCGGTGAAGGAGGAGGGACGGAGGTGGAGAGCGCTATCCCCGCCTGCTCGCCCCGAGCGATGGGAAGATGAAACAGGTAGTGAATGGCAGCAAGGGAACTGAGCGCTCAGTTAAAGTTGCAGGTATTGCCCCTTGGATCCATCATACGAGGGTGACGAGAACATACCACGCAGACCCAAAAAACGCTGAGTGAGCTGCACAGAGGGATCCTACTGACCCTCGAGAGACTAAGACCATCCTTAAGAAGAAGGAAAAAAGATCCTGGATGAGCCCCTTCAGGATGAGGCCGCACAATCAACTCCTGCTGCTTGGCCTCATCAACGTGATTTTGAATTTAACTTCCATTTCAACTCAGGACAATGTTTTCATCTCATGGGCACATTTCTATGCAGACTTCCAAAACACCTCCAGCTGCTGGATATGTGGGGCTATGCCTCTGTCAGTGATGGATGGACTTCCTTGGTAGGTATCACTGCTCTGCCAAGGAGATTTTAAACCACTCTGCTCTTTTCTGGGATGACAAAAAGAGGCTTTCCTCTCTTGTCAATCATAACCTCTCCTTGCTGTCTTGGTGTAAGACCTACAGTCAGTAGACTCGGGTCATGGGGTTACATTTGATATAAATGCCCGTGTAACAAAAGCCTAACCTACTTGTAAATCTACCCCGGTAGCCCCAGTAAATCTACCTTATTTACGTGCTAGATGGACAAGATCCGTGTTTCAATGGTATGAGTATATTGCTGCCTTATTCGTATCCTCTATAGGGACAACAGATATCATGATTAAAGTAGAGACCTTACTAATTTCACAAAACAGGCCCTCCTAGATAGAACAAAAGCCATCCAAGCCTTAAATGAAGAGCAAATCCAAATGAGAAAAGCAGTAATTCATAATAGAATGGCTTTGGACATACTCACAGCTGCTCAAGGAGGGACCTGTGCTATAATTAAGGTTGAATGTTGCGTATACATTCCTGACTTATCTGGTAATGTATCGACTGCTTTAGATGACATGAAAAACCAGGTAAAAGCAATGTCAAATGAAAACATTCATTTCTGGACTTCGGTCCTATCTTGGGTGAAGGGTGATTGGTGGAAAACTATGTTTACCACTGTTATAGTTGCCTTGATACTTCTGCTTTGTGGACCCTGAATTTTACAATGTATTATAAAC TCONS_00015277 r 3' 5752 TCONS_00015278 r 5' 60 EMBV3_27444 GCTAATCCAGAGATCATTCAGTAATAACCACCGTGAAACCAGACCGGGTGACATCGCTCG Gene BVT0102_218633 + 1 EMBV3_06309 GK000008.2:44901903-45177228 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34975 CCCCTGGTGAAGTTAGCTTGTGGCAAGAAGAATGGCTACCAGGCTCTGATGTATTTCCTC Gene GeneID:530966|LOC530966:XM_002692885:85_cdna Constitutive 0 NULL GeneID:530966 15 GENE LOC530966 NULL similar to olfactory receptor, family 9, subfamily G, member 1 EMBV3_14991 AAGTTTTGCAAGTTGGGTCGGCAAGAGCCAAAGAATTAGCATATCCCGTGTGCCAGGAGG Gene GeneID:532903|WARS2:NM_001034582:65_cdna Constitutive 0 NULL GeneID:532903 3 GENE WARS2 MGC127444 tryptophanyl tRNA synthetase 2, mitochondrial EMBV3_12969 CTTCTCCGCAAAGTGCAACCCAGACACAAGGAAATGTCATTGCACAAAAGTTAACTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18806 TCTGAAGAACGCAGCCCTCCTCGGTCCAGGGAGAAGGAAACAATCGCCAAGTGCATTGCA Variant GeneID:282701|ATP5F1:NM_001038501:35_cdna 114^729 1 EMBV3_09738 GeneID:282701 3 GENE ATP5F1 MGC134131 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 EMBV3_27468 CCGACCGTGGCGTCCCCGTTGTGGTTACTTATACAATCCCTACTCCATACCCAGAAAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31529 CAGCTGAACCGTTACGAAGTGTTTCGCCGCTCAGCCTTCCCCAAATCCACCATCAAACAT Gene GeneID:615245|LOC615245:XM_002696443:82_cdna Constitutive 0 NULL GeneID:615245 20 GENE LOC615245 NULL similar to Transcription initiation factor TFIID subunit 11 (Transcription initiation factor TFIID 28 kDa subunit) (TAF(II)28) (TAFII-28) (TAFII28) (TFIID subunit p30-beta) EMBV3_43364 TCCCTCGTGTCGACGCTCTTAGTGGTTCCTGCTGAGAAGCTGCCTCACGTGCTCCTCAGA Gene BVT0102_257724 + 0 NULL GK000029.2:44741764-44756081 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165459 TCONS_00165460 1 XLOC_100528 Coding TCONS_00165459 XLOC_100528 Coding Coding EIF1AD 29:44745741-44759171 j TSS123590 1403 1 TCONS_00165459_1 114 6 0.89597140516792 3.74141805935733e-138 8.47669396105171e-60 5.38193958707027e-300 4.24439624896883e-33 2.52977527443789e-186 9.77717472020356e-132 6.00993459504486e-48 5.94835961811334e-62 1.4718278205054e-05 5.0773852287931e-25 8.53324754996033e-06 3.46286869428758e-05 1.07745350852334e-46 0.000412730736199877 3.41463047025096e-29 8.52154947554027e-05 6.46780779621612e-18 1.70064492635552e-18 2.16890183400619e-62 1.17169686062943e-69 2.87579351193023e-53 3.19426494878176e-130 3.08837254105048e-05 4.16681823899859e-25 1.1811092980318e-67 0.00010041883202952 4.11590124010673e-66 0.000302038754416802 5.68753735959963e-07 0.000597046744376275 XM_005227188.1 EIF1AD PREDICTED: Bos taurus eukaryotic translation initiation factor 1A domain containing (EIF1AD), transcript variant X1, mRNA. 0.0 1036 99.83 0.410548823948681 NM_001242481.1 EIF1AD Homo sapiens eukaryotic translation initiation factor 1A domain containing (EIF1AD), transcript variant 1, mRNA. 0.0 746 88.89 0.409836065573771 TCONS_00165459_1 sp|Q58CY2|EIF1A_BOVIN EIF1A_BOVIN Probable RNA-binding protein EIF1AD; 5e-80 236 100.00 0.991228070175439 1 coding 0 0 0 0 -0.189534791001599 0.123115811726913 0.0340399272689631 0.497949644922522 GCGCCGGAAGTACGGCGTCCGACTCAGGCCGACACGAGTTGTCCTCCTCGCTGTCGGACTTGTTAAAGTCGGACGGGAACCGGATGCGCCCGAGACCTGAGTCCAAGCCGACTCCACCGTCAAGACCACTAGCGAGTCCTTTTTCTCTGCTTTCATTGCCTCAACTCTGAAGTGAGTCGTGGACGAGCCGATCTCTGCGTCCTGCTTGGAGAACCGGGTCGTTCTGGCAGCTTTCGTGGGATCCGAGGGCCAGAGAGTCCTCAGGACCCCAGGGAACAATCTACATGAGGTGGAGACAGCCCAGGGGCAGCGCTTCCTGGTGAGCATGCCCTCCAAGTACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTCTCATCGTTGACCCTATTGAAGAAGGAGAGAAGGTGAAGGCTGAGATCTCCTTTGTGCTCTGCAAAGACCACGTGCGCTCTCTGCAGAAGGACGGGCACTGGCCCGAGGCCTTCTCCCAAGTGACTGAGAAAGACAACAACGATAGGAACAGACAGACTCAGCCAGAACTCCCAGCTGAGCCACAGTCGTCAGGAGAAGAGTCCAGCTCTGAAGACGATTCTGACCTTTTTGTTAACACCAACCGCAGACAGTATCATGAGAGCGAGGAGGAGAGTGAAGAGGAAGAGGCGGCCTGAGACCGCGGGACCCGCTTCTCCTCTTGCTCAGAGACTGGTCCTGGGCTCCTCTGAGCGTGGACATTCCCAGGGGGCTCTGCGGATCTTTCCCCCTGGATGGGGACAAGGCAGGGCCCCTCTCTGAACTGACCTTCTGACATGGGAGAATTAAACCCCTGGAAATTCCTGGGGTTGAGGGACCCTGGATTTTGTCTTCAATCAAGGCCCAACCGTCTCTGCTTCCCGAGTCTGAGGAGCACGTGAGGCAGCTTCTCAGCAGGAACCACTAAGAGCGTCGACACGAGGGAGGGCGGGACGCCGGCAGTGGCTCGTGCTCACATGTGATTCATGGATGATGTACTCGGGGACTCCAGAATCCGTGTGGAATGTGTCAAGGCACACGGCGTACCTCGCCTGGTGACACAGGAATAAACCGTTAGCAATGATCAAGGCTGTCTCCTGAGTGGTGGCAATTTCTTTAGTTATTGTTAGGACAGCATCTGATGATGCTAAGATACCCACTTCATTATGTAACCTGTGCTCGTTCACAGCGACGAGCACCAGAAACCCTCGTTACTAGCCAGTCCAGGCGGTTCAGCATGGAGAGAGTGCTACCACACCATTTGCATTAACTGTTGTAGGAGAAGAGTACTTTTCTTTTCCTTGGAATTCAAACCGCATGAGCTGGGCCACAGTGAGAGGTGTCATCAGTTCCTGGCCCCATATTCAGTCAACATTCATGGGAGCTGCCAAC EMBV3_36138 CCGTTGGCACTGGTTGGGCTTCTCTTCAGTTCGGTATCAACAAGGAGGGAATGAAGATGA Gene GeneID:407236|LY75:NM_001001158:61_cdna Constitutive 0 NULL GeneID:407236 2 GENE LY75 MGC140308 lymphocyte antigen 75 EMBV3_12515 TGAAGAGGTGACCCATTAGCAAGTGACTGAGTTGGAGAATTAGAGGAGGACCGTTCTGGC Gene BVV0101_051263 + 0 NULL GK000026.2:21670839-21677155 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150419 TCONS_00150426 TCONS_00150416 TCONS_00150423 TCONS_00150422 TCONS_00150425 TCONS_00150418 TCONS_00150415 1 XLOC_091869 Coding TCONS_00150426 XLOC_091869 Coding Coding FAM178A 26:21635152-21672552 j TSS112681 6397 1 TCONS_00150426_4 817 0.0142254181647647 18 0.829433942084013 0.000746584637670972 0.00124354727768289 0.00112851042240264 1.32211186108928e-16 0.000475914031791948 1.77432921852335e-07 2.37396409872751e-11 0.000607991678041962 3.3648601400416e-09 0.00015317777563661 0.000116298616301612 0.000553328262458473 3.51996097708905e-09 5.83923075156521e-05 0.000106633633890186 0.00382212045407705 0.00148558338257379 0.000202658871139203 0.000795095560490525 0.000519186228587424 0.000169300493230434 0.00138051519627367 2.29567023011153e-79 9.82574834838565e-10 9.53160564241155e-05 0.000307298350374675 6.25728301388948e-13 8.13369530878369e-06 0.000527501294455841 0.000403390458653619 XM_005225611.1 FAM178A PREDICTED: Bos taurus family with sequence similarity 178, member A (FAM178A), transcript variant X5, mRNA. 0.0 1.060e+04 99.95 0.919337189307488 XM_005269965.1 FAM178A PREDICTED: Homo sapiens family with sequence similarity 178, member A (FAM178A), transcript variant X1, mRNA. 0.0 6985 86.61 0.911521025480694 TCONS_00150426_4 sp|Q8IX21|F178A_HUMAN F178A_HUMAN Protein FAM178A; 0.0 1490 90.50 0.998776009791922 1 coding 1 1 1 1 0.26466428991279 0.174036632156838 0.0267512065640894 0.565215128579935 CAGGAACAAAGATGTTCCTTAATCAGGAAAATAAGCATTTTTTTTTCTAAGGAAAATGGACATCTCTCAAGAAAAAGATCTTCTTCTGATTCATGGGGACCTACTTCAGGCTCTAAGCAGAATAAATTCCCTGACAAAAGAAAAAGGAACTCTGTGGACTCAGATCTGAAAAGCACAAGAGAGTCTATAATGCCAAAAGCAAAAGAGTCCTTCCTTGAGAAGCGTCCCGATGGACCACATCAGAAAGAAAAATTTATAAAACATATTGCACTGAAGACACCTGGTGATGTATTGCGCTTGGAAGATATATCCAAGGACCCAAGTGAAGAAGCTGATTGCTCCTCTGCAGGCTTGACACCTACAAATTCTGGGCACCAGATCCGTGGTAGTGACCAAAACCGTGTGGCAAGTACCAAAGAGACTAAGATACCGAAACCCCACTTATCTTTACCTCAGGAAAAGTCTGCAGTTAAAAAAGCTAGCAACCTTCAGAAAAATAAAACTGCTAGCTCTGTGGCATCACAGGAGACAAAACTTCTACCTTTGCTTTCCCATGTTCCAAGTGCTGGTTCCTCTCGGGTTCCATTAAATGCTAAAAATTGCACTCTTCCAGTTCCTAAAAAAGATAAAGAGCGTTCTTCACCTAAAGAGTGTTCTGGGCATTCTACAGAGTCCTCCAAACACAAGGAACACAAAGCAAAGACTAATAAGGCTGATTCTAACATATCTTCAGGGAAAATTTCTGAGGGATCTTTACGTTCAGAATATGGCACTCCTACAAAGTCCCCCCCAGCTGCTTTGGAAGTTGTGCCATGTATTCCAAGCCCATCAGCACCTTCAGATAAAGCCCCTTCAGATAAAGAGAGTTCAGGAAATTCTAATGCAGGTAGCAGTGCACTGAAAAGGAAACTAAGGGGTGATTTTGATAGTGATGAAGAAAGTTTAGGTTATAACCTAGAGAGTGATGAGGAAGAGGAAACATTAAAATCACTGGAAGAAATAATGGCTTTGAACTTCAATCAGACTCCTACAGCTACAGGAAAGCCTCCGGCTCTTTCTAAAGGGCTTAGATCTCAGTCATCAGACTATACAGAACATGCTCATAGTGGGACTTATACAAATACTTTAGAGCGTCTAGTGAAGGAGATGGAAGACACACACAGGCTAGATGAACTGCAAAAGCAACTACAGGAAGACATCAGGCAGGGCCGAGGGATTAAATCCCCAATCAGAATTGGTGATCACGACAGTACTGATGATGAAGATGGCCTCTTAGAAGAGCACAAAGAATTTCTAAAGAAATTTTCAATTACAATTGATGCTATTCCTGATCATCACCCAGGCGAAGAAATATTTAATTTCCTTAATTCTGGAAAAATTTTCAGTCAGTATACTTTGGATTTAAGAGACTCTGGTTTTATCGGACAAAGTGCTGTAGAAAAGCTTATTCTTAAATCAGGAAAAACAGATCAAATTTTTTTGACAACACAAGGCTTCCTTACCTCGGCTTATCACTATGTCCAGTGTCCTGTACCTGTGTTGAAGTGGTTATTTCGGATGATGTCAGTTCATACAGACTGTATTGTATCTATGCAGATTCTAAGTACATTAATGGAAATAACAATAAGAAATGATACCTTCAGTGATTCACCAATTTGGCCCTGGATTCCATCATTGTCTGATATAGCTGCTGTGTTTTTCAATATGGGAATTGATTTTAGATCTTTATTTCCTCTGGAGAATCTTCAGCCAGACTTTAATGAAGACAATCTAGTTTCTGAAACACAGATGACATTGGGGGTGAAAGAAAATGAAGATTCATCTTACAAGCCAATTTTTTCTTCTCTCCCTGAAACCAACATTTTAAATGTGGTTAAGTTTCTAGGCTTGTGTACATCAATACATCCAGAAGGTTACCAGGATCGTGAAATAATGTTACTGATCTTAATGTTGTTTAAAATGAGTTTGGAAAAAGAATTGAAACAGATTCCTCTAGTGGACTTTCAGAGCCTCTTAATAAACCTGATGAAAAACATCAGAGATTGGAACACAAAGGTGCCTGAACTCTCTCTGGCCATAAACGAACTCTCCACTCATCCCCACAACCTTCTCTGGTTGGTACAGCTGGTCCCTAATTGGACATCACGTGGAAGGCAACTGAGACAGTGCCTCAGCCTAGTGATTATTTCAAAGCTTTTGGATGAAAAACGTGAAGATATCCCTAATGTGAATAATCTGCAGATATCAGTCTTACATCGCTATCTTGTGCAAATGAAGCCTTCAGATTTGTTGAAGAAAATGGTCTTGAAGAAAAGAGCTGAACAACCAAACAGCACTATTGATGATAGTCTTCATTTGGAACTTGAAAAGCAGGCATATTACCTGACCTACATTCTTCTTCATTTAATCGGTGAGGTTAGTTGTTCTCACTCCTTTTCTTCTGGACAACGGAAACATTTTGTGCACCTCTGTGGGGCTTTGGAAAAGCACGTTAAGTGTGATATTAGGGAAGATGCAAGACTGTTTTATAGAACCAAGGTAAAAGACTTGGTTGCCAGGATACATGGAAAATGGCAGGAAATAATACAGAACTGTCGGCCTACTCAGGGGCAACTTCATGACTTTTGGGTACCAGATTCTTAACAGGAGTTGCAGCAAAAAAATTATGAACTAAGAGAAATTCAATAAGAGCCTTTCCTAAAGGAATACTACAGAATCCAATGGAAAGCTAAGAACATGTGCAGCAGACGTGCTACTTGAGTATCTAGAATGAAGCTGGTAATGAAGAAATTGCCATTTCTGAAGCAGATATGAAATATAATCTGATTAATTACAGCAACTGGCCTTTTAAAAGAGAAGAATTCCTTGAGAGGGGAGAGGTAGAAGCAGCTGACAGTTGCATATCTAACCTTCCCCTGTTTACTCTTGTTAAATTGTAAGCCTGTTATCTTTTTTTTTTTTTTGGATTATATTTGCAGCACTTGGATAATCACAGGAAGTATGTAAGAAAGGGCTTGGACCAACTTGAAAAGCTGGACCTGGAAACCAAGATCAAGTTCCAGTTTGATTTAATTTTCCTTTTTAGTTATTTTATGACTCAAAGGGGAAAGCTTAAAACTGAGTTTAATAATTGAAAGGATAAATCTTTTCTGTTACTCTTGTAAAACCACTGGGGTGTTTTAATCCATGCATTTTTCTTCACTATTCAAGATTATAAATCTGTTGGGTTTTTAAAATACATTTAAACAAACAGTTGAGAAACAGAAGTTTGGTACCTTGTCAGATCCCCTTAAGGGGAAGAGTTTAAGCTATAAAATAGTGGCTTTGTTTTTATTCCAAAACATACATCTGCTGTTTGTTTTGGATTTATTTTACATGCGTTTATATATTTTTTAATACTGGTTAAATCTTAGCATCTTGGCTAAATCTTAGAATTCTGGCCCTTCGTAGCCATATTACAGAAGTCTGTATTGTAAAAGCTAAAGGTCTGAACAGGTTTCCAAAAACTTTTACTTTCATGAGGATATAACCTTAGCAGAGACCTGAATAACATTTATTCTTTGGTACGCTATGCACGCGTGTGTATGTATGTATGTATGTATGTGCGTGCTTGTATTTTAAATTTGTTGCACTTGAAAACCACAGCTGCTCTAAATTCTTAAACACTGGAAAGCCATCCTTTGGTTTCAATGGTGGAGGGTTAGGAGAAATGCACATGCTAGTCTTAGCCCAGGGCCCTTTTGAAGCCTTCGGTAGTAATAGACTCTTACTAGCTAACTGAAGAATTCTTTTGTTGACTGAGTGTCCCTTTAGGAGGGTTGGTTTCCTGAAAGATGATGCCAGCTTTGTGTTTCTTTCTTTCAATATTGACTTGGATGACACTGCTCTCCTGAGCACTCTGTTGCCTCCAGTTGTGGGAGAAGGATGAAGGGGAAGGGATTTGGACTTGATGTTTATAGTTTGAGAGAGGAGAAAATAAATTTTGAAAAATAGCTTTCTACCTCTAATTGAGGCTTAGCAGTAAAAAGCATTTTATCTTAAATTTTCATTTAAAATAGTAACTTTTGAGCCCATGTCAAACATTGAGCAGTTAGAGATTTTATAGGGAAGACTAAGTTAATCTAGTCCCTAAGAACCCTGACTGAATGAGGCTTCAAGAGTCAGACCAACAAAAGTTTTATTCTGTGTTGCGTTTACTGGTAAGAATATTATTATCTTGATACTACCTCTCAAGGGTATTGTTAGAAAATGCCACTTATGGTTAATGAGATAGATACAAAGAGTTATATTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACAGTGGGGGCTTTCACTCTCTGTAATTTAATATTTTGTAGATATACATTATTTGTGTGTAATTTTATAAGTGTTCATATTTTTCTCATTTTGCATTGTGTAAAGTGTACAATATCTCAAAGTATAAAATACTGCTTATATTGCTTGTAATTACAGTGTGTAAATATTTTCTAATCGTGTACATTGAAAGGGGGAACGAGTGGGTTATTCAGGTGTTTTTTTTTTAAAGTGACCCTTTTGTATTGCAGTTTCAGCAGATAACTGCTCATCAAATTTAAAACCACTTTGATACGTTTTATTTAGGAGTTCCAATAAGAAAAGTCTCTATTTTTAATTGTCTCTCTCCATTGGAAAAAAAGTTCATCTGTCCCTTTAAAATAAATGGCCAAACATCAATTTGAACCGTTATATTTATGGCTTGGTAGATATCCTTAGTCTCCAGGTCATATTCCAACAGTATTTTCATTGGGGCTCTCAGAAATTTTTGTGAGTCTTTAGCACAAGTAGCCCATGGTTTTTCTCCGAAATCAAGTATTATCCTTCACCCTCTGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTGTTGTCCTGTGAATGGGATGGTAGTGGGGGGGGAATATGTTTGTTGCACAGAGAATGTCAGGTCACTTTTTGGACTTGGCAAACAAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGTGTCAAAAATCACCTTGTCTAATTTTCTGGATCTGTATGTCAAACTTATTGCCCTTATTGCAAGCTGAAAATTAAGGTACTTGCAAGTGTTTATGCTTTTGTGTGTAACTGTTTGCCTTATCTAAACTGCTTTTCTTGTTATCCTAAAGTATAATTCTGTTGGTTATATCATGTTAAGTGAAGAGGCTTTCCATGCACAAAATGCATCTATGTAGCAGTAAAGTCATATTTGTACATTTTCTGTTTCTCTCCTGATGGCAGTGGTGCCTTTGTCACCTTTTAGAAGGTTGGCATTTTGTTTTTGTTTTTAAATACAAGTAACAGCTTGCTTTTGACTTCACAAAAATCTCCCCGGACGTAGAAGAAAATGGTGCGTTGTCATCCTGGCTCAGTTGGAGTATTTGCATTTTTATTTCTGTCAAAATAAGTATAGTTGGTGGGGATGGGCCAGTAATAATGTGTGGAGTCTTTAAACCAAGAGTAATTTTGAAATTAAAAATTGAAGAGGTGACCCATTAGCAAGTGACTGAGTTGGAGAATTAGAGGAGGACCGTTCTGGCTTGTCTCTTTAGAAGGCACGTTGGAGTACAGGTGGCTTGGGCGTGTAGCGTGTGATCTGCGGCTATTTCTTACTCATCAACAGTGTCGGTGCACCTCATTATGTGTGCATTTGTTTTCCCTGGGCAGTCCTGTGAGCCAGGTAATCCACCAGCTTTTAGGAAGTTTACAGGTAAATGCAGATTTCCTTTTTCTTCCCTTTTTTTTTTTTAAACAGATTTTATACTACGTCTTGTTTAAAGTCCTATGAATGTATGTGTCTGCTATTAAAATGGCTTTTTCTCAGTTTGAACACGTGTTTGGTTAAATTTGTTTGGGAGTGGGGATGGTTAAGTATCTGGGACGTCCTGTTTCTTCCCTTGCCCCACCTAGTTTTTAAACCTATTTTTTCCTCTTGGATTGGATTCTTCAGTCAGTTTTTTAGTTTGATATTTCCTCTTTCTGGAAAGGAACCATGTTGAGCCCATAGTTGTACACAGTTCACTGTTACATACCCAGTTAATAATTTGCTGTATACTCTGCCATTGGAAATGTGATCACCTCTTTCTTACATCACCTCATTCAGTACAAGCATTCAACAGCTGTATTACTACTGCATGTCAGGCACTGTTTTTAAGATTCAGTGGTGAACAACACAAAGATCTCTCATGAAACTTACCTTCTGAAATCCAGGTGAAGGTATTTTCTTTTATTAGGCAAATAGGACTGGAAAAGAATACCTTTGGCCTGGCTTCCTTTTTCTGGAGCTCAGGGCAAAAAAAGGGGAAGCCATGCAGAGTAGAGGCAGAACTTAGGACCACCTCCAAC EMBV3_17838 CATGGTCACTGTTTGGTGGTCTGCTGCCGGTCTTATCCACTATAGCTTTCTGAATCCTGG Gene GeneID:534913|SETMAR:NM_001083726:33_cdna Constitutive 1 NULL GeneID:534913 1 GENE SETMAR MGC151518 SET domain and mariner transposase fusion gene EMBV3_36699 TTATAGTTGCTCTGGGTCCTCGTTGCTGATCATGGGCTTTCTCTAGTTGTGGCGAATGGG Gene BVV0102_425418 + 0 NULL GK000005.2:106238041-106248786 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02187 AGACCTACCAGGCACATTCATTCGTGTCTGCCTTCATCGGGGGCTTGCTGGTGTTTGGAA Gene GeneID:514831|LOC514831:XM_002697715:21_cdna Constitutive 0 NULL GeneID:514831 24 GENE LOC514831 NULL similar to peroxisomal membrane protein 4, 24kDa EMBV3_28557 ATCTGGATGGCATTGGCATGGGCCGGCCTGATCCTTGGGGGCTTTGCCTCTGGGCAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13994 ATTCTGGTGTGCGGCCTCTTCCAGAGCGAGAATCCAGTGTCCCCTCGTTATGCTGACAAA Gene GeneID:100335712|LOC100335712:XM_002691195:122_cdna Constitutive 0 NULL GeneID:100335712 11 GENE LOC100335712 NULL hypothetical protein LOC100335712 EMBV3_03687 TTCATACAGTGTGTCTCCCAGAGGCTAACCAGGCCATTTCAGCTGGTTCCACTGCTTATG Gene GeneID:521615|TMPRSS11D:XM_002688313:157_cdna Constitutive 0 NULL GeneID:521615 6 GENE TMPRSS11D NULL transmembrane protease, serine 11D EMBV3_43079 ACCTTCAGTAGAGTATTTCATCTGAGATGTCATTGATTGTAGGATACATCCTGGCTCCAG Gene BVT0102_232461 + 0 NULL GK000010.2:12522443-12690726 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24270 GTGACACCAGGCCTAAATGTGGATTTTGTCATGTAGGGGAGGAAGAAAATCAAGCAAGAG Gene GeneID:518186|PHF6:NM_001075769:11_cdna Constitutive 0 NULL GeneID:518186 X GENE PHF6 MGC142680 PHD finger protein 6 EMBV3_05469 CCTGCCTGATGCTACTGTCTCAGGTCCAAGATTGCCTGCCAGAGGAGACACTCGGGACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06816 GCCATCACTGTTGTATTTGAAGTGGTTGAGGAATCCTTGTATGCCGTTTTCTTTGGCTTC Gene GeneID:507120|CIRBP:NM_001034278:35_cdna Constitutive 3 NULL GeneID:507120 7 GENE CIRBP MGC127049 cold inducible RNA binding protein EMBV3_13203 AAGAGCTTCTTGCTGAACCTGGGCAAAGACGACAACAACCTGTGCCTCCACTTCAACCCT Gene GeneID:326598|LGALS1:NM_175782:19_cdna Constitutive 0 NULL GeneID:326598 5 GENE LGALS1 NULL lectin, galactoside-binding, soluble, 1 EMBV3_32954 TGGCAGAGGAACGCAGGCAGAAGAAGGAAGTTTGAGATGTGCTAGAAGCTTAATGATTTC Gene GeneID:505129|MATR3:NM_001102486:208_cdna UTR3_Alt 2 NULL GeneID:505129 7 GENE MATR3 MGC140178 matrin 3 EMBV3_12939 TTTAAAAAACTCTTAGGGAGGGTGGGGGAGGGGGTTGGTATGGGAAACACATGTACACCC Gene GeneID:508183|SLAMF6:XM_002685863:421_cdna Constitutive 0 NULL GeneID:508183 3 GENE SLAMF6 NULL SLAM family member 6 EMBV3_18528 CTTCCCCGACGACACCAAGCTCACCAAGATTGAGACGCTGCGCTTCGCCTACAACTACAT Gene GeneID:508548|NEUROG1:XM_002689194:66_cdna Constitutive 0 NULL GeneID:508548 7 GENE NEUROG1 NULL neurogenin 1 EMBV3_13072 GTGGAGACTGCAGAGGACATGGCCCAGGAGGTCAACCGAACTTTCCAGGAGCTGGCGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32785 ATGCATGGACTGGGCGGAACGTCTCATAGAGATGTTCAGTGGGACGAATGCGAACACAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00001 CGTGCTCAGCGACCCGCGCAAGCGCGAGATCTTCCTCTCCCCAAAACACCCGAGAAACGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12780 GAGGGTGACTAACACACAAGCAGAAGCACAGAATGCAACCCCTAAGCAAAGGAAGCAGAG Gene GeneID:784202|PPP1R1C:XM_002685256:50_cdna Constitutive 0 NULL GeneID:784202 2 GENE PPP1R1C NULL protein phosphatase 1, regulatory (inhibitor) subunit 1C EMBV3_06892 AAGATGTGTGACAAGTCGTACACGCACCCCAGCTCTCTGCGGAAACACATGAAGGTCCAT Gene GeneID:514433|ZIC2:XM_002691972:44_cdna UTR3_Alt 2 NULL GeneID:514433 12 GENE ZIC2 NULL Zic family member 2 (odd-paired homolog, Drosophila) EMBV3_15191 ATGCATGGGTCTCCAGCCTCATAGTTTAGAATGAAACAGCTCCTCCTCAGCCTCTAGCTC Gene BVT0102_265008 + 0 NULL GK000007.2:27064925-27228692 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21379 AGTTCAAGAAAGGAGCACTGGTTCTGTTGCCGAAATCTTGGCTCTCTGTGCACCAATGCC Gene BVV0102_076979 + 0 NULL GK000007.2:46214459-46228875 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11911 CAGTTATAATTAGTCAGCTAGAGCCGCTGGGTCCAGTATGTTTGCTACACGCAGCTCTTC Gene BVV0102_233359 + 0 NULL GK000009.2:98064204-98127843 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11050 CTCCTTCAGGGTTGGCAAATACAGCAGCAGAGGGGATGCACCCAGTGGAAAACATCTATA Gene GeneID:768047|HAVCR2:NM_001077105:20_cdna Constitutive 0 NULL GeneID:768047 7 GENE HAVCR2 MGC140131 hepatitis A virus cellular receptor 2 EMBV3_38106 AGTTCCCTCCTTTTCTCCGTCTTATTGTCTTCTTTTTCCAGGATATGTGCCCTGTGAGGG Gene BVV0102_091229 - 1 EMBV3_28446 GK000023.2:32763529-32775582 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34774 TCTTATGCTGCTCCATCATGAACTGACACCAATGCCCAGCAATCATTCTCTCCCCCTTCC Gene GeneID:508852|MGC128175:NM_001034332:102_cdna Constitutive 0 NULL GeneID:508852 2 GENE MGC128175 NULL hypothetical LOC508852 EMBV3_20041 GACACGGCAGGGCAGGAAGACTACGACCGCCTGCATTGAGTTTCCCCAGCCCTGACAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12192 AGCCGACTTCAGAAGTGCTTTGTTTAATCTGGCTCTCCTGTACTCTCAGACTGCAAAGGA Gene GeneID:522132|TMTC3:XM_002687188:79_cdna Constitutive 0 NULL GeneID:522132 5 GENE TMTC3 NULL transmembrane and tetratricopeptide repeat containing 3 EMBV3_11788 GATTGCGCTCCGCGCTGGCCCTGGTTACAGGCCTGCTTTTCTCGCCCGCCGTCTGTCGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20553 GAGATCCCAGTTTGAGGACAGCCTCGGTCTTTGGGGGCAGGGGTCCTTTTGCAGAGATTT Gene GeneID:282532|RASA3:NM_174676:39_cdna Constitutive 0 NULL GeneID:282532 12 GENE RASA3 GAP1IP4BP RAS p21 protein activator 3 EMBV3_07018 TTTATTAATTACTTTGAGTACAACTGTATGAGGGTGTGGTGGGGCCCTTCTCCCCCCGCC Gene GeneID:540547|CCND3:NM_001034709:341_cdna Constitutive 0 NULL GeneID:540547 23 GENE CCND3 MGC128700 cyclin D3 EMBV3_26809 TATTCTTTACAGAAGAAAGTGAGTGAAATGGAACTTAAAACAGTAACCTCAGACTTGATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17139 TCCTCAAGGGCATGGGCAGTGGCCTGTTGCCACCGCGGAGACCTGGGGAATGTCCGTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12371 AGTCCATCATTGGCCTACAGCGCTTCTTTGAGACCCGCATGAATGAGGCCTTCGGGGACA Gene GeneID:519422|TRIM28:XM_002695515:334_cdna Constitutive 0 NULL GeneID:519422 18 GENE TRIM28 NULL tripartite motif-containing 28 EMBV3_37824 AGAGAGAAAGTAGAGCTGTCCAGATGCGTTCTGTCCCATGTGCTTCAGGAATCTTCTCCC Gene GeneID:100141038|CYTH1:XM_002696156:93_cdna Constitutive 0 NULL GeneID:100141038 19 GENE CYTH1 NULL cytohesin 1 EMBV3_39663 CCTGAGGAAGAACCTCTTTACGACCGCCCATTGTAGCCGGAGAGTTCCACATAAATACAG Gene GeneID:617083|UBE2F:NM_001076443:23_cdna Constitutive 1 NULL GeneID:617083 3 GENE UBE2F NULL ubiquitin-conjugating enzyme E2F (putative) EMBV3_01917 AGGCCTTTTCTACCTGTGCGTCTCACCTGGTCATTGTCCTTCTCTACTATGGCAGCTCCA Gene GeneID:514434|LOC514434:XM_002697411:106_cdna Constitutive 0 NULL GeneID:514434 23 GENE LOC514434 NULL similar to olfactory receptor Olr1730 EMBV3_38039 GGCATAGTTGGATTCACACGCTCGGCAGCGCCCTTCAATGATTGCCAATGGATTAATAAC Variant GeneID:512259|HPGD:NM_001034419:29_cdna 526^689 4 EMBV3_21252 GeneID:512259 8 GENE HPGD MGC127443 PGDH hydroxyprostaglandin dehydrogenase 15-(NAD) EMBV3_02323 CTAGACTGGCGTGAGTGCTTTGGTTGACTTTATACCTGTGTGTGGATACAAGCGGTCTGG Gene GeneID:517336|MED13L:XM_002694587:666_cdna Constitutive 0 NULL GeneID:517336 17 GENE MED13L NULL mediator complex subunit 13-like EMBV3_28492 AGGTGGGGCAAGTGGGATCTGAGGGGAAAATGTTGCTCCTTGGGGTGGGTAAGTGTTAAA Gene BVV0102_134431 + 0 NULL GK000006.2:104136965-104149823 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210602 1 XLOC_129112 NonCoding TCONS_00210602 XLOC_129112 NonCoding NonCoding - 6:104144003-104144877 - TSS158109 874 2 TCONS_00210602_1 75 0.281464530892448 1 0 0 0 0 0 0 0 0 0 0 0 5.23840955429077e-06 0 0 0 0 0 0.00138668930276686 0.00031578934947476 0 0 0 1.69809481899447e-05 7.34764555714807e-05 0.000172633660105123 0 0 0 0 0 0 XM_005213807.1 TNFRSF19 PREDICTED: Bos taurus tumor necrosis factor receptor superfamily, member 19 (TNFRSF19), transcript variant X1, mRNA. 1e-30 138 90.29 0.116704805491991 0 noncoding 0 0 0 0 -0.00090635332585064 0.995381422874233 -0.0532795840636588 0.374404293672927 GTTCTTGCCTGGAGAATTCCAGGGACGAGGGAGCCTGGTGGTCTGCTGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCGTAACTAAGCTCATCATAGTCGAGGTAATTCAGTATAACCACCTCTTTGATCACAAGTGTAGGGAGAAATTGGAAGAAGTCACTGAAGCCCTGGAGGGGTACTTGCTCCCCTGGTCGCACTCTGCAAGCTGTGCAGGGAGGGAAGTCTGAATAGCTGCTGCCTGATGGTTTCTTAATGCCTTTTATGTCTGTGTCCAAATCTGCAAAGTGTTATAACTGTCATCCGACTAATAACGACTTTTCGTAACTTGAGATTTCCCCAAACCCATGCTTACCAGGGGCAGTTGTACAGGTGGGGCAAGTGGGATCTGAGGGGAAAATGTTGCTCCTTGGGGTGGGTAAGTGTTAAATCTCTGTAACAAGAGACATGATGTCAGTCATTTCAAACATTTAAAAACTTAAAATGATGAACGCATCATTTGAAAATACAACCAGAAGGTTACCTGAGCACTGGAACTTTCTCCAGATTGTTCAAGCTTGTAAAAAAAACAGCAACAAGGTAAAACAACATGAGGCAATGCGTTATTCATTACAAAGAGATTTGATTCTAAATGAGAACGGGCTTCAAGCCACTATCAAGCATTATACTCATCAGCGATGTACCTTTCTCTCTGGAATAAAAAGCAGTTGAGTCTAATGTATAAACTGTTATATTTAAAATGGATAACCACCACGGGTCAGGGGACTGTGCTCAGTGTCATGTGGCCGCCTGGATGGGAGGGGAGTTTGGGTAGAATGGATATATGTATATATATATATAACTAAATCGCTTTGCTGTCTACCTGAAACT TCONS_00206091 . 3' 4947 TCONS_00206091 . 3' 5820 EMBV3_26468 GAGAGCTACTAATTCTGCCTGGAGGAAGGGCATTCCAAGTAAAGGAATGTGTGAGGTCCG Gene GeneID:100337011|LOC100337011:XM_002693842:148_cdna Constitutive 0 NULL GeneID:100337011 15 GENE LOC100337011 NULL hypothetical protein LOC100337011 EMBV3_03638 GCAAAGAGGAAATAGTTCAGTTCTTTCAAGGTATATTGAGATCTTCAGAAGTAGCAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16907 TCCACGTCTTCAGAAAGTCTGCTCTGCTGGGGCTCACTCTGCCATCCAGCACTGCCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01000 GTGAATTGGCTGGGTACACGCTGTAAGGTTAGAGTGGTTGTGAGCCGACGGAGACTGTAA Gene GeneID:615113|MGC152346:NM_001102286:49_cdna Constitutive 0 NULL GeneID:615113 2 GENE MGC152346 NULL Uncharacterized protein LOC285141 homolog EMBV3_32510 CCTGGTGATGGTCTCTAACTCTACTTCTCCAGCATCAACTCACATTTGAACTCAGCAGGC Gene GeneID:505078|APOL3:NM_001100297:170_cdna Constitutive 1 NULL GeneID:505078 5 GENE APOL3 NULL apolipoprotein L, 3 EMBV3_33185 ACCTGGTAACCTCTGCTGCGTGTATAACCAGTTCACAGGCGCCACTTTCCATATTCTCTC Gene BVV0102_020447 + 0 NULL GK000022.2:15577583-15644933 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05570 AGAGAATAGAGCCCCAGGAAGGGTGCAGAGTCAAAGTGAGGACCCAGAGTGTGGACATGA Gene BVT0102_157573 + 1 EMBV3_25554 GK000030.2:118607669-118633275 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07753 GCATATGATAAGTTTGCAGGAAGAAAGCCTGGTTTGCTGCAAGACTCTACCCCTTCCCCA Gene BVV0102_253653 + 0 NULL GK000016.2:11853253-12483070 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156814 TCONS_00054728 TCONS_00204180 TCONS_00011558 TCONS_00134878 TCONS_00220136 TCONS_00250272 TCONS_00019267 TCONS_00132405 TCONS_00010745 TCONS_00138406 TCONS_00018727 TCONS_00229177 TCONS_00148378 TCONS_00188655 TCONS_00206254 TCONS_00186861 TCONS_00189837 TCONS_00135618 TCONS_00197812 TCONS_00020508 TCONS_00151311 TCONS_00110358 TCONS_00058128 TCONS_00167486 TCONS_00186919 TCONS_00056822 TCONS_00134877 TCONS_00068428 TCONS_00021459 TCONS_00046799 TCONS_00048752 TCONS_00206255 TCONS_00229178 TCONS_00169138 TCONS_00160954 TCONS_00229179 TCONS_00233185 TCONS_00166135 TCONS_00118116 TCONS_00057018 TCONS_00011993 TCONS_00243110 TCONS_00057884 TCONS_00122090 TCONS_00118479 TCONS_00120346 TCONS_00035886 TCONS_00091893 TCONS_00197076 TCONS_00235856 TCONS_00116161 TCONS_00037742 TCONS_00089192 TCONS_00098489 TCONS_00207792 TCONS_00149464 TCONS_00171864 TCONS_00118516 TCONS_00039279 TCONS_00100335 TCONS_00202228 58 XLOC_095274 XLOC_032537 XLOC_124364 XLOC_007109 XLOC_081568 XLOC_133453 XLOC_153215 XLOC_009947 XLOC_080770 XLOC_006296 XLOC_084614 XLOC_009409 XLOC_138675 XLOC_090260 XLOC_114696 XLOC_124865 XLOC_112912 XLOC_115874 XLOC_081841 XLOC_119473 XLOC_011183 XLOC_092080 XLOC_066262 XLOC_035925 XLOC_102322 XLOC_112967 XLOC_034625 XLOC_041687 XLOC_012132 XLOC_026938 XLOC_028883 XLOC_103286 XLOC_097847 XLOC_142667 XLOC_100973 XLOC_072282 XLOC_034820 XLOC_007543 XLOC_149773 XLOC_035681 XLOC_073646 XLOC_072637 XLOC_073143 XLOC_021016 XLOC_056664 XLOC_118741 XLOC_144309 XLOC_070330 XLOC_021571 XLOC_053977 XLOC_058734 XLOC_126307 XLOC_091340 XLOC_103929 XLOC_072652 XLOC_023097 XLOC_060578 XLOC_123873 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_12953 TCCGAAAAACTTCCGTGGCTTTTGCATCCCCCATGGAAATGAGAAGGGTACTTCTCTAAG Gene GeneID:538952|PRR15:XM_002686842:51_cdna Constitutive 0 NULL GeneID:538952 4 GENE PRR15 NULL proline rich 15 EMBV3_16325 CTTCTACCTACCAATCAATCCTCCAGTCCTCCAAACTACAGTAGCAGACACATTGTCACC Gene GeneID:512180|LOC512180:XM_002686412:358_cdna Constitutive 0 NULL GeneID:512180 3 GENE LOC512180 NULL similar to Uncharacterized calcium-binding protein KIAA0494 EMBV3_30389 TCAAGGTCAATGTTATCTATGGTCTGATGGTGGCCCTCCTGATTGGGGGCTTTGACATCC Gene GeneID:510150|LOC510150:XM_002693201:386_cdna Constitutive 0 NULL GeneID:510150 15 GENE LOC510150 NULL similar to Olfactory receptor 658 EMBV3_21406 AATACAGCAGCATCACCACCCACTCCAGCACCACTGAACCCTTCCTACTGGATGGACTGA Gene GeneID:506995|ITGB4:XM_002696208:255_cdna Constitutive 0 NULL GeneID:506995 19 GENE ITGB4 NULL integrin, beta 4 EMBV3_09193 CAAGCACCTCAAAAACGTGGAGGCGACCCATTGCAGTCCGCTGGAACCCGAGGACTTTCA Gene GeneID:514829|C13H20orf135:NM_001038541:1075_cdna Constitutive 0 NULL GeneID:514829 13 GENE C13H20orf135 MGC134103 chromosome 20 open reading frame 135 ortholog EMBV3_11143 GCCGCTGTGCCCGCTAGAGCAGCATCAGATAGTGAATGTTGTCATATCAACGTGGACACA Gene GeneID:617053|CNNM1:XM_002698485:551_cdna Constitutive 0 NULL GeneID:617053 26 GENE CNNM1 NULL cyclin M1 EMBV3_04475 CTTCTAAAACCTCAGGAACAGTACAGAGATTGAAGCCCTCAGTATGGCAGCACAATTGGC Gene GeneID:514432|BRMS1L:NM_001083428:20_cdna UTR3_Alt 3 NULL GeneID:514432 21 GENE BRMS1L MGC143052 breast cancer metastasis-suppressor 1-like EMBV3_07949 GGTTCAGTAGCACTTTCCTGGTTGGCAATACCCATGTTCCTTGTCATGCGTCAATGCTGG Gene GeneID:280885|OMD:NM_173947:72_cdna Constitutive 0 NULL GeneID:280885 8 GENE OMD NULL osteomodulin EMBV3_24140 CTGATGGCGGCGTTGCTGGCTGGATTCTGACAGGTAATTCTCCAACCTCTTCTTCACCAA Gene BVV0102_368610 + 0 NULL GK000007.2:93253095-93872177 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214569 TCONS_00214572 TCONS_00214575 TCONS_00214566 TCONS_00214589 TCONS_00214592 TCONS_00214568 TCONS_00214571 TCONS_00214576 TCONS_00214591 TCONS_00214567 TCONS_00214570 TCONS_00214596 TCONS_00214574 TCONS_00214573 1 XLOC_130722 NonCoding TCONS_00214596 XLOC_130722 NonCoding NonCoding - 7:93389954-93456826 - TSS160459 679 0.430044182621502 3 0.98989098413363 0.000122339734229166 0.000586224696320959 0.000502346488940652 0 0.00013841906168165 3.31187384318657e-72 8.19606876646567e-05 0.000678428864652149 0.000168800536589538 0.000178971860292118 9.48226410809298e-163 2.62188592435879e-24 6.87605319997127e-56 2.84211619845243e-60 0 0 0 0 0.000192623951790885 0 0.000785368774991782 1.49213767781541e-15 0 1.05083763744497e-54 0.000152204940780846 0.000101703560112054 0.000366723994735843 6.25564722887828e-06 0 0 XM_005193404.1 LOC101908689 PREDICTED: Bos taurus C-type lectin domain family 17, member A-like (LOC101908689), mRNA. 7e-07 59.0 72.32 0.159057437407953 XM_005274845.1 OR2H1 PREDICTED: Homo sapiens olfactory receptor, family 2, subfamily H, member 1 (OR2H1), transcript variant X1, mRNA. 7e-14 82.4 69.26 0.368188512518409 0 noncoding 0 0 0 0 -0.508588122720233 0.0334834016677696 0.0356035728556691 0.538050775774729 GTGTTAATACCGTGTTAAGGTGGTTTCAGCTGCTGGCTCTTGGCGACGTCAGCGTCAGGACTGTTTCACCGTGAACCGTTGCCGGGTAGGGTGAACCTGGGGCCCTGCTGAACGTCTCCCTTCTCACACTGCAGGAAGCCGCACCACTTCTGGCGTCTCTTCCCTGATGGCGGCGTTGCTGGCTGGATTCTGACAGGTAATTCTCCAACCTCTTCTTCACCAACTCGGCACAGCTGGGCCTGGGGCCCTGGAAAACCACATGGTGGAGATAAGAAGCCACAGATAGGACGGCCTCTGACGTCATGAATGGCTGCTGAGGTGAAGGCTCCTCACTGCTTAGAAAAAAGTTCTTGAAGCTGGAAATTCAAGGCACTGGCAGATTGGATATCTGGTGAAGGTCTGCTTCCTGGCTCAGAGATGCTGTATCATCTTATGTCCTTACATGTTGGAAGGGGCAAGAACACTCTGGAGTCTCTTCTATGAGGACATTAATTCCATTCACGAGGACTCGACCTTTGTAACTTAATCAGTCCTAAAGGTGCTACTTCCAAATATTATAACATTGTGTGCCAGGATACAACATAAGAATTTTGGAACAAGTTGGGGTAAGGGGAAACACAAACATTCAGTCTATAGCAGGATGGAGAGAAGTACATATACATCCTTTCTCAAGGGAATG TCONS_00217987 r 5' 136840 TCONS_00217987 r 5' 136840 EMBV3_00137 AGGTCATGGTCACTTTTGGTGGTCTCCTGCCTGTCTAACCCACTATAGCCTTCTGAATCC Gene GeneID:100125239|CCDC127:NM_001103318:2_cdna UTR3_Alt 1 NULL GeneID:100125239 20 GENE CCDC127 MGC137900 coiled-coil domain containing 127 EMBV3_39853 AGTTCCATCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTTGACCATTACAGCA Gene GeneID:540446|ACHE:NM_001076220:281_cdna Constitutive 0 NULL GeneID:540446 25 GENE ACHE NULL acetylcholinesterase (Yt blood group) EMBV3_13118 CTTAGGGCAAACTGGACCTTAGGAAACTACTCTCTTCGCACACACAGCAGCACACATCCT Gene BVT0102_001602 + 0 NULL GK000010.2:57123376-57712107 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014136 TCONS_00014137 TCONS_00014134 TCONS_00014139 TCONS_00014135 1 XLOC_008249 NonCoding TCONS_00014139 XLOC_008249 NonCoding NonCoding - 10:57698026-57702369 - TSS10305 876 1 TCONS_00014139_1 96 3 0.798940580377706 0.000795107340837079 0.000322863557120422 0.00141125291599087 0.000228205279122498 0.00145090975974385 3.09726575449852e-10 4.12109962641718e-17 0.000252545812818541 0.000173430720099683 1.03265676314856e-47 0 1.22449602109647e-05 8.43191885090639e-06 0.000306082010903938 0 0.000391949112660766 0 0 0.00038291636132061 0.00175025023272633 0.000487700750461641 0 0 0 0.000106767443312391 6.41031540566828e-05 1.40882367584355e-14 0 3.32500399034477e-05 0 XR_226918.1 LOC101904374 PREDICTED: Bos taurus uncharacterized LOC101904374 (LOC101904374), 5e-143 511 98.64 0.329908675799087 XR_248132.1 LOC101928499 PREDICTED: Homo sapiens uncharacterized LOC101928499 (LOC101928499), misc_RNA. 1e-125 453 71.51 0.970319634703196 0 noncoding 0 1 0 0 0.0430243092545664 0.952826562884587 -0.149235707726809 0.016382364751627 GGATCACTTTTTCTTACTGTGCACTGGGGGCAAATCCTCAAACGTGAACCTGATCACTTGTCACAGAAGCAACTTGCCATGAAATCCGCTAATGCGCCGCGACTCGCCCACCCGGATAACCCCCGCAGTGGTGTAACCAGCGCGCGCGCCCAAAGCCGTCTTGTCCCTCGAATGCGCTCACCGCCGGCAACACTTGGAGAATCCAGCCCACAGTGGTTTCGAAAACCCCATTTTCCTGATTGCAGCTCAGACTGTGGAACCCCGAGAGCCTCCCCAAAGAGGGAGCGTGAATCGGGCCAAGTAGTGGGTCGGGGACACACACGCACGCACGCACGCATATGCACACAGAGGCAGAGCAGTGCTTCATAGGACCTAAGATCCAGGGTGGCTGGAAAGGGATCTGGGAGGCCACGTCTGAAGGAGCCAGCAAGGCCCTGGTGCTGCCTCTGCCAGAGTCGTGCAGCCACTGAAGCAGCCTGATCCTGATAGTTATTTTGGGGGGAAAAACACCTGGAACCCAGGTTTGAGCTAAAGAAAGTAAGGGCAAGTGACAGATGATCAAGCATTTCTTTGAAATGAGGAAGAACTGAGAACTACCCAGCTGGCCTGGCCTTAGGGCAAACTGGACCTTAGGAAACTACTCTCTTCGCACACACAGCAGCACACATCCTCCGATGGCAAGTTCACCGGTGCCCAGCAAGGGCCACTGCACCTCCTAACTGCTTTTTCAGCCTCCTCCAGGTTTTGCCAGGCAAATGAAACAAGAACTCAATAGTAAATTATTTTGTTCAGACTTCTGTCTTTTTATGAAAATAAAAGGCAACACTTTGTCATTTTTAATCATATAAGCAGACAATAAACCTAATCTTGATATTG TCONS_00014140 s 5' 9739 TCONS_00014140 s 5' 14081 EMBV3_13069 TGGCAAGGGCTCGGGAACACTGGTGCAATCGATGGTCAGAAACCTTGAGAAGCAGTTGGA Gene GeneID:512800|DZIP1L:XM_002685080:222_cdna Constitutive 0 NULL GeneID:512800 1 GENE DZIP1L NULL DAZ interacting protein 1-like EMBV3_17056 TCATCAAAGAAGGCTGGCTCCATAAGCGCGAATGCCAGCTGATGAAGACCGAGAGACCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08863 CAACCCAGACGTACGGACTACCTCCTTTCGCTTCAAGCACAAATGCCAGCCTGATACCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31439 TGTCCATGGCAAATGCTGGCCCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCA Gene GeneID:786614|PPIA:XM_002690516:511_cdna Constitutive 0 NULL GeneID:786614 10 GENE PPIA NULL peptidylprolyl isomerase A (cyclophilin A) EMBV3_00871 TCCTCAGCTGGCAAACTCAGTGCAGATCAGGCTTATTTCTGCGTCACATGATCTTGGCCT Variant GeneID:540537|ANAPC5:XM_002694490:353_cdna 389^498 1 EMBV3_34933 GeneID:540537 17 GENE ANAPC5 NULL anaphase promoting complex subunit 5 EMBV3_30853 AGGCAACCTCGCCTCCATCCACAACTTTAATGTCAACCTTATCATCCATCGCTTGAGCAC Gene GeneID:617374|PRG3:NM_001098471:31_cdna Constitutive 0 NULL GeneID:617374 15 GENE PRG3 NULL proteoglycan 3 EMBV3_39823 CTTTCGGGGGTGCTCTAGGTCTCCTTTGCATCTCTGCATCTTTTCTGCTTCACCTCTGCT Gene GeneID:506707|LOC506707:XM_002693872:141_cdna UTR3_Alt 2 NULL GeneID:506707 16 GENE LOC506707 NULL similar to complement component 4 binding protein, alpha chain EMBV3_16534 GACTGAGTGATGCTCGGTCCTGCTTTGTGATGTCATATCCCCAGACCCCTCTTTCTGCAG Gene GeneID:510417|BOLA-NC1:NM_001105616:81_cdna Constitutive 0 NULL GeneID:510417 23 GENE BOLA-NC1 BoLA MGC134252 non-classical MHC class I antigen EMBV3_27000 CACCTTCTTCCTGTGACGGGTGAACTTTTGTGTGCTGTGTCTCGGGTCCAGTAGAGGAAT Gene GeneID:614507|RAB15:NM_001046538:205_cdna Constitutive 1 NULL GeneID:614507 10 GENE RAB15 MGC137938 RAB15, member RAS onocogene family EMBV3_36631 AGGCGAGAAGAAGGATTTGTTGCTGCCTTGCGGGATCGGAAGGACCCTGAACGAATTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18940 GTTTTTGCTTTAGCTGGGCTAACTGACTTGTTCCACTTACTTATATGATAATTTCAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26209 ATGCTGCCATATGAATAGCTATGTTTTTTCTCTCACTTTTGACATTTGGGATGAAAAGCC Gene GeneID:282573|KCNMA1:NM_174680:245_cdna Constitutive 3 NULL GeneID:282573 28 GENE KCNMA1 NULL potassium large conductance calcium-activated channel, subfamily M, alpha member 1 EMBV3_07233 GCAGATGGCTCAGGCGAGGATCAGCGCTAAGGTCAGCAAGTTTCTGGATGACCTGGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24919 GGTTCCTGCGTCCTGTACAATGTTATGAACCTCCATCCATAGTTCTTTGCACTCTACCCG Gene BVV0102_052109 + 0 NULL GK000007.2:54735693-54748000 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12200 ACGAGTTCCAGAAGAAGTGGCACGAGGAGGTGGAGGCGCTCAAGGAGGGCGGCGGCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34426 GAAAGGCATACCTTGCGGGTTCCATCAAAGGACTCTGCCTGCCCTGGTATGGCATCGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18508 AAGAGATCTAGTACATACAGAGGGGCAGCTTCAAATCTTTCTTAGTAATTATAATATACC Variant GeneID:616194|C3H1ORF41:NM_001076412:112_cdna 464^581 1 EMBV3_03961 GeneID:616194 3 GENE C3H1ORF41 NULL chromosome 1 open reading frame 41 ortholog EMBV3_10819 AGCGCGACGCCGACACCCAGAACTTTGTCAGCTTCGTCTGCAGAGACTCCATCCAGAAGT Gene GeneID:535174|DCI:NM_001046396:234_cdna Constitutive 1 NULL GeneID:535174 25 GENE DCI MGC134174 dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase) EMBV3_13246 AAGGCCTAAGCCAAAGCCAGGGGATGGAGGATTTGTGGAAGTAATTTCCTTACCAAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15956 CCACGTGTGTGACTGTAATTCCCATGTTCAAGGCTGTAAGCCCAGAGAGTTTTCCACATC Gene BVT0102_189977 + 0 NULL GK000006.2:51166023-51536862 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205137 1 XLOC_124589 NonCoding TCONS_00205137 XLOC_124589 NonCoding NonCoding - 6:51387370-51406045 - TSS153263 2852 2 TCONS_00205137_5 83 0.509116409537167 2 0.847381385884117 0.00155751886706021 0.00184599312068454 0.00249080625676857 0.00119751568992684 0.0009106858355962 0.000782463424209765 0.000520919907502722 0.000802779789284545 0.000645208268458721 0 0 0 5.03029180261274e-06 0.000129475687303657 1.54824112623968e-05 0 0 0 0.000805554070750031 0.00113398000029445 0.000472302438384789 2.40731890164718e-11 0 0 0.000706098372328046 0.000744781032124392 0.000737102355043265 0 0 0 NM_174233.2 AGTR1 Bos taurus angiotensin II receptor, type 1 (AGTR1), mRNA. 0.0 645 91.22 0.16234221598878 0 noncoding 0 0 0 0 0.0578634168486756 0.704849170415951 -0.0294142933033308 0.713072338829291 GGGCGCTTGACCTGCTATCCAGGTGGGCCCAATGTAATCACTATGCTCTTTAGAGGAGGAATGAAAGAACCTTCAGAGCCAGAGGAGGAGGTGATGCGATGCTGGAAGAAGAGAAGGGAGTGTTGTACTTTGAAGGTGCAGTTGAGGGCACAGGCAGATGAGCTCAGAGGAACCTAGAAGCTAAAAACGTCCCCAGATGGACAAAGGTCCATCTAGTCAAGGCTGTGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGCGCCAAAAAACTGATGCTTTTAAACTGCGTTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGACACCAGTCCTGGGTGTTCATCGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACCCTGATGCTTTAGGGATGGGGCAGGAGGTGAAGGGGACAACAGAGGTTGAGATGGCTGGATGGCATCACCGACTCGATGCACATGAGTTTGGGCGGACTCCAGGAATTGGTAATGGACAGGGAGGCCTGGCATGCTGGAATTCATGGGGTCACAAAGAGTCAGACATGACTGAGCGACTGAACTGAACTGAAAAGACCACTTACGAGTTTGTCAAGTTACTTAAAGGAAAATATTTAAAAATCTTTATTTCTTTCTCATTTATATATATAATGAATGTCATATTATTACAGACTAGGAAAATTAACAATTAAAATTGAACAAAATGTGTAGATTCAGTGCTGATTTATAGCGAGTTTTAATAATAACCACGTGTGTGACTGTAATTCCCATGTTCAAGGCTGTAAGCCCAGAGAGTTTTCCACATCCACTGGTTCTCAGTGTGATTGGGCCCTTGTGGAAGTAACAGGTAATTTTAAATACTTTCTGGTCAATCAGTTGTATTGTTTCAATGGCATTTCTTCTTCAGGCTACAGGTCACTGTCTCAAAGCTTTGCACAAATAACCATGGAGCTCTTGTAATGTTCAAAATTAGGGTTGTAGGGATATTTATTTCTAGATAAAGCAGAATCCTATTAAATAGAATTTGCCCAATTACAATGCTTTGTCAGAATTGTCCTACATGTATGTATAAGCCTTAATTACTTCTGTTTAAAAAGATGAACCTGAGGTCCTTTAAAACCCTAAATTGCCTATTGAGTTATCAGTATGCATTTGGAGTAATCAGTATATTCATAATCTACTGAATGCTAATAATTTGAAAATGTGTGATACATGGATTATTTATATCAGTGCTGAAACAGATCATTCAGTGAAAGAGCTCTTTGAAACAGAAACCTTCACAGATTTGAGTCATTCAAACCTGAGTTAAAATATTGGGTTTGCCAGTAATTACCTGTAATTTCTGTAATGTCATTTAACTCTTGTAAGCCTCAGGATATTCATATATAAAATGGATATTATGTCTACTTTACATAGTTGTTATAAGAATTCATTAAGGTAATATCATATTAAATGCCTGATATATCCATTCTCTGTGCAAACATATTGGTTCCTGTCTCTTTACTTTAATTCTCTGATCCTAGTGAAAAACTTGGCTTAAAACTCAACGTTCAGAAAACTAAGATCATGGCATCTGGTACCATCACTTCATGGAAAATAGATGGTGAAACAATGGAAACAGTGAGAGACTATTTTTTGGGCTCCAAAATCACTGCAGATGGGGACTGCAGCCATGAAATTAAAAGATGCCTGCTCCTTGGAAGGAAAGCTATGAGCAACCTAAACAGCTTATTAAAAAGCAGAGACATACTTGACCAACAAAAGCTGACCTCCGAAGAATTTATGCTTTTGAACTGTGGTGTTGGAGGAGACTCTTGAGAGTCTGTTGGACTGCGAGGGGATCCAACCTGTCAATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATTCTGAAGCTGAAACTCCAATACTTTGGCCACCTGATGTGCAAAAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGACTGAAGGCTGGAGGAGAAGGGGATGGCAGAGGATGAAATTGTTGGATGGCATCACTGACTCAATGGACATGAGTTTGAGTAAACTCTGGGAGTTGGTGATGGACAGGGAAGCCTGGCATGCTGCAGTCCATGGGGGCGCAAAGAGTTGGACATGACTGAGCAACTGCTGAACTGAACTGAACATCTATAATTCAATAGTTGGTGTCATATCTAGACTATGCTTGATTTATAAAAATACTATTTTGTTAGGCTTGAAAGATCAACACCGTCATCTAAGTTATAGTGTAGAAGATAATGACTTTCTCCACTACTACTTGATAATATTAATGGCAAAAAATATAGGCTTTGGTAAATCTTGTAGTAATTCATATATAGCCATAAAAGTCCCACTGAAGCTTGTTCTGCTTGTGATATCTGAGTGGCTAGCAGCAGCACATTTCCCACAATATTAGCAGAATTGTAAAGTTTCCTCTGATTGAAAGAAGCTTCCATGGTTGGTCAAGGGTGGCAATTGCCCAGTGAAATGTGTAAATAATGAAATGCACTAGAGGAGTTGAGGTGTCTTCTTCATTTGGCCTGACAACTGGTTTTGCTTTTCCCTAGCTACACATTGACAACAGTGTACTGGGAAATCAGAATCAGTTTTATGTGATTATTATGTATATATCACCCAAGGAATGCCTGAATATCTTATTGGTGAACATAGATCTACTTTCAAATTAGATTGATAGGGTTGCTTATAGAACACATGAGAATATGTAATATTTTTATAGGTCACACAG TCONS_00203180 TCONS_00203181 r 5' 146830 TCONS_00203180 TCONS_00203181 r 5' 130818 EMBV3_07926 GCATTGTTCTGTGCATTCTGTGTGAGGCACTGTGCTGGATAATGGAGAAACTGGGGTAGG Gene BVT0102_084230 - 1 EMBV3_14264 GK000001.2:64865033-64870751 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003546 1 XLOC_000875 NonCoding TCONS_00003546 XLOC_000875 NonCoding NonCoding LOC100847116 1:64835927-64867158 = TSS1812 855 0.362573099415205 2 0.972686519372398 0.00127701193406162 0.000896996529376701 0.000824729761278734 0.000398626598124407 0.000353432395795026 0.000280086380257836 0.000599276027841055 0.000443343952662062 0.00061601383422902 0.000285279761757296 0.000239263098645646 0.000432126609463803 0.000290999018174112 0.000576652383479086 0.000542521986161911 0.00396553185056086 0.00164942643572734 0.00144821763274801 0.00166582436168694 0.000943576967453918 0.000351458693957816 0.00172093470019729 0.000467039380969974 0.00179499629789822 0.00105470352517188 0.00193175094106421 0.000923507108682083 0.00051460499785595 0.000641711841231317 0.000998336822202069 NM_001192736.1 GLA Bos taurus galactosidase, alpha (GLA), mRNA. 4e-31 140 87.50 0.129824561403509 NM_152305.2 POGLUT1 Homo sapiens protein O-glucosyltransferase 1 (POGLUT1), transcript 2e-97 360 71.86 0.766081871345029 0 noncoding 0 0 0 0 -0.027307413021952 0.831444753079413 0.0164340151034225 0.748656009920846 TCTGAGAAGGAAAGGATAAGTGTGGAATTCAGCTAGTATTAAAAAACAACAACAACCTTCAAAAGTTATGGAGATAAAAAATTACTTTCAAAACCATACATTTTATATGTCATTACACCCATCTTCATATCATCTACACTGAGGTAAACAAATACATGTAAAATCTGAATAACATCTGCTGTACTTAAATACAAATGGTCTTATTAACTCTTCAAAGGACAGATGAGAATGTGCATTGACCCAATTCTTAGCGTCTTGTCCAGTCCCTCTTGAAGCCAATGGCTGGGCAGTCTGTAAACAGGATTTAGTTAAGTCCACTGTTCCCATCCATCCATCCATCCTTCCAGCATTGTTCTGTGCATTCTGTGTGAGGCACTGTGCTGGATAATGGAGAAACTGGGGTAAGTAAAACATGATTCCTACCCATCAAGAAGCTCATAGGGGAAACAAAAAAGCTCACAGGAGAAACAGTCAAATAACTACAGTACAGTGTGATGTCATATAATACAGGCTTGAGAAAAATATTATGATAGCCTCTAACTGCCTAGAGTAATGAAAATAAGGAGTCTGAGAGATAATGCTTGAGTTGGAAACACTTCCAGGGAAATGCACCCTCAGCTGCTAATCCAAAGGACAGAAAATTTTGCTCTTAGTTTTGTTGTTCAGTCATTAAATTGTGTCTGACTCTTTGTGACTGCATAGACTACAGCATGCCAGGCTTCCCTGTCCTTCACCACCTCCTGCAGTTTGCTCAAACTCATGTCCATTGAGTTGTTGGTGTTGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACAGAACTGAA EMBV3_22104 GCCAAAAGCTGGTTCTTTGAGAGGATAAATAAAATTGACAAACCACTAGCCAGACTCATC Gene BVV0102_147377 + 0 NULL GK000001.2:4451640-4476535 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008835 TCONS_00136862 TCONS_00071184 TCONS_00023027 TCONS_00224115 TCONS_00023028 TCONS_00253241 TCONS_00250504 TCONS_00124128 TCONS_00130261 TCONS_00251853 TCONS_00124121 TCONS_00233580 TCONS_00165811 TCONS_00162457 TCONS_00107515 TCONS_00037712 TCONS_00166941 TCONS_00079688 TCONS_00141271 TCONS_00091329 TCONS_00111488 TCONS_00251889 TCONS_00037937 TCONS_00148277 TCONS_00223458 TCONS_00070842 TCONS_00122012 TCONS_00141422 TCONS_00109885 TCONS_00056147 TCONS_00207067 TCONS_00254568 TCONS_00080108 TCONS_00190575 TCONS_00233374 TCONS_00248781 TCONS_00030947 TCONS_00063104 TCONS_00230245 TCONS_00208725 TCONS_00122326 TCONS_00066258 TCONS_00124022 TCONS_00177025 TCONS_00252355 46 XLOC_004392 XLOC_083073 XLOC_042956 XLOC_013697 XLOC_137411 XLOC_013698 XLOC_156182 XLOC_153447 XLOC_075680 XLOC_078972 XLOC_154794 XLOC_075673 XLOC_143062 XLOC_100651 XLOC_099338 XLOC_063425 XLOC_021541 XLOC_101777 XLOC_048572 XLOC_085699 XLOC_056104 XLOC_067388 XLOC_154830 XLOC_021766 XLOC_090159 XLOC_136758 XLOC_042619 XLOC_073568 XLOC_085850 XLOC_065789 XLOC_033950 XLOC_125586 XLOC_157500 XLOC_048992 XLOC_116610 XLOC_142856 XLOC_151724 XLOC_017197 XLOC_037831 XLOC_139737 XLOC_127237 XLOC_073881 XLOC_040972 XLOC_075574 XLOC_106799 XLOC_155296 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_29320 TGGGATTACCAGCCCGACATTTGTAAGGACTACAAGGAGACTGGCTTTTGCGGCTTCGGA Gene GeneID:493640|RNF113A:NM_001007807:17_cdna Constitutive 0 NULL GeneID:493640 X GENE RNF113A MGC138121 ZNF183 ring finger protein 113A EMBV3_26623 CTCTTGTCGAGGGGAACGGATAAGAGATTATTACCAAAAGCAGCAGGGCTACGCCGCTTG Gene GeneID:534164|SLIT2:XM_002688148:15_cdna Constitutive 0 NULL GeneID:534164 6 GENE SLIT2 NULL slit homolog 2 (Drosophila) EMBV3_30547 GCTGAGTACTATAGACAACAAGCAGCCTACTATGCCCAGACAAGTCCCCAGGGAATGCCA Gene GeneID:513562|FUBP1:NM_001076846:38_cdna Constitutive 0 NULL GeneID:513562 3 GENE FUBP1 MGC143062 far upstream element (FUSE) binding protein 1 EMBV3_29102 TGTCCAGAGTAGGCATATCTTTAGAGACAGAAAACAGACGAGTGGTCACTTGGGGCTGGG Gene BVT0101_010537 + 1 EMBV3_33105 GK000013.2:60492006-60505461 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045819 TCONS_00045818 1 XLOC_026537 Coding TCONS_00045819 XLOC_026537 Coding Coding PSMF1 13:60502197-60545001 = TSS33360 4616 1 TCONS_00045819_3 270 0.17157712305026 7 0.892320631731421 7.86260090000433e-05 0.000113317247113052 0.000302358920118499 0.00010090995198351 0.000106174118337286 1.02084645448165e-05 4.37511184777248e-06 0.000382030209545079 0.000181324576031587 4.26219854675135e-05 2.02460173920218e-06 1.91512850577513e-05 2.03023042333218e-05 3.28255269067437e-07 0.00010355641203592 0.00154845658589609 2.35830911901187e-05 0.000285090370195297 0.000486251729275846 0.000438578184195347 6.02877822514111e-05 0.0005541920954341 0.000175777779361197 0.00109651655640707 0.000161884886609547 0.000618043435893948 0.00033664657835152 9.97635434906716e-05 6.6165807668386e-05 0.000126540317795291 XM_005214859.1 PSMF1 PREDICTED: Bos taurus proteasome (prosome, macropain) inhibitor subunit 1 (PI31) (PSMF1), transcript variant X1, mRNA. 0.0 3059 100.00 0.367201039861352 NM_006814.3 PSMF1 Homo sapiens proteasome (prosome, macropain) inhibitor subunit 1 (PI31) (PSMF1), transcript variant 1, mRNA. 0.0 1842 81.98 0.378682842287695 TCONS_00045819_3 sp|Q3SX30|PSMF1_BOVIN PSMF1_BOVIN Proteasome inhibitor PI31 subunit; 0.0 554 100.00 0.996296296296296 2 coding 0 0 0 0 -0.177447401710872 0.368892185230651 0.00577777744882083 0.91044640792575 GTGGCCACACCCCCGCCTCTGGGCGTCTCCATTTTGGTCGCGCAGGTTGACATTAGACCACTACCTGCGGAGTAGCGGAGAGGAGTCAGCAGTGTTGTGAGGGCCCTGTCGGCTCACCGCACTTTCTTCCTCCCTTCCTCCGCCCGCAGAAGCCAGGGTCGCCCATGGCTGGCTTGGAGGTACTGTTCGCGTCGGCGGCGCCGGCCATCACCTGCGCGCAGGACGCGCTTGTCTGCTTCCTGCACTGGGAGGTGGTCACGCACGGCTACTACGGCTTGGGTGCCGGCGACCAGCCGGGTCCCAATGATAAGAAATCAGAACTGCTGCCAGTGGAATGGAACAGTAATAAAGACCTGTATGTCCTCCGGTATGAGTCCAAGGATGGGTCCAGAAAGCTACTCGTGAAGGCTGTCACCGTGGAGAACAGCATGATCATCAATGTGCTGGAACATGGCTCACAGCAAGTGTCAGATTTGACCCTGAACTTGAATGATTATATCGATTCAGAACATCTGGTTGACTTCCACAGGGTCTACAAGAACAGCGAGGAACTTCGGTCCCGTATTGTGTCTGGGATTATTACACCTATTCATGAGCAGTGGGAAAAAGCCAATCTAAGTCCCCACCGGGAGTTTCCCCCTGCCACTGCCAGAGAGGTGGACCCACTCCGGATTCACCCACAACACCCACATACCAGCCGACAGCCTACCTGGTGTGATCCCCTGGGCCCGTTTGCTGTCGGGGGAGAGGACCTAGACCCCTTTGGGTGTCGGAGAGGTGGCATGATTGTGGATCCCCTGAGATCCGGCTTCCCAAGAGCACTTATTGACCCGTCATCAGGACTCCCAAACCGGCTTCCTCCAGGCGCTGTGCCCCCAGGAGCACGCTTTGACCCCTTTGGACCCATTGGGACCAGCCCATCTGGACCTAACCCAGACCATCTGCCCCCGCCGGGCTACGATGACATGTACCTGTGAAGGCCTCAAGAATGTAACGTCCCAGCCTTCCCTCCACTGTCCTGGAGCTGCCACCGCGGGCCCCTTCAGCACCCGTTTTCTTGCGGGCTGGGGGCAAAGGACTCTGTCCATGTGTTTGCAGGCCGGCTGGGATTGCCTCCCCACCCCCTACCAGAGCCAGGGCACCTGCTGCAGTTCTCCACCTGGCTGCATATAGGTCCCAAAGAGAAATCAGTGTGTGTCTCACCACCAGCTCCTCTCCACTTCGCAGGGGAGACTCCGGCAACATATGCCCTTGACCCGATGCAGTTCCAGCTGCATCGCTATAAGAACAGAACCCATTTTGGATGTTATTATTAAGAACCAAATGTCAATACAAAAATCATGTTGCCGGTCTCCCACTCTTCTTTACTGCACAGCTCCTTCCATGTATGAGACTTGAGAGTTTGGATCTTTGAGGGGCTAAAGGACTGTCTTAGGCATCTTCCTTTCATGAATTGCTCTCACTCCTGATACCACTAAGATGGTCTGGCTGCATGGATGAAAATGAGTGACTGGAACCCCCATAGGCCACAGGGATGACTTCCACAAGGCCAGGCGCATTGCAGAACGACTGCATCTCTCTGCAAAGGGCAAGACGTTCCAGTTCTGCTTGTCTGAGCCTGTCCTCTGGGTCTGTCTGTGCCTGGGCAATGGCCGCCTTCAAACAGAGGAATAAACAGAGCAGACCTGAAGGCTAATCTCTTTTTTGCCACTAACTTAACTGAGTGACCCTATGCAAATCCCTTCCCCTTCCAGGGCCACTGTGCCCACCTGCGAAATCCGAGGTGCCTTTCTTGCTCTAAAACATCCTGGTGTCGGCTTCTATGCGTGATGATCCCTAGTAACTGGGGCAAAAGGTAAAGAATGAAGGTACAAGGCTTTGTGTGGCGATTACCTACAGAGTCTGCAACTCTGTGCCTCTACCCACCGTGAGGCCCCGACATGAGCATAGCAGCACAGTGCTGGACATAGGGACAAGCAGGGAGCCTGGCCTCTAGAAGCCAGTGTGTGACAAGGGTGAATGGAGGAGTTGGTGATACAGGAAACAACCCAGGAAGGCATTCCACCCCCAGGGAGCCCCAGCCTCTGGAAGTCTGTGCCCTGTATCCAGGCCCACCTGACCTTTGGTGTTCTCCAGATCCTTTTCAGCCCTAGGCCTGACAGACGTGTTCAGTGATGAACCCCTGTGCTGGAATAGAGAAAACACCCTAGAGCACCAGACTCCGAGGCAAGAGATGAAGGCACTAGTCACTTTCACTCCACCGCTAGCATTTCAGCCATGGGTGGTGCCTTTTTCAGCTCCTTGGACTCCTTTCTCTAAATTAGGAGATAGTATTTGTCTGTGGGCAGAGGGCTACCAGAGCCTTCCTAAGGCATCTGCTAATGTGCTATATAGCCTGGAAGTGCCTGTCTGCTGTGCCCAAGAGTGGGTTACAAGTAAACTAGACAAGGCATATATGCCCAGGGTCAATCCAAGATGCCACCTGGGTATAGGTGGGGAGGCTAGGGCTTCCTGGGCGTTTCTGGCAGGCCGCATTTCAAGCACTGATTTAGTGAAGGACCAGTGTAAAGCTTTTAGAACAGCTCTGCTCTGGAAAAAGACCCAGAGGTCAGGCAGAACTGCAAATGCAGTCATCAATGGCCATCTTCCCCAAGAGCCAGCAAATGGGTGAGATGTTTTGTTTGGAAGCTAGATCATACCTTCTACAAAGAACTTGAGGCAATTTGCTCATAAAAGCATCCTTTATTATAAAAAGAAGCATTTAAAGGAACATCAGACAAGCAGGGGAAGTAAATAACTTTTAGGACCCTGATTCAGGGGAAGGACAAGATTGAAACAATAAATTCACCACTTAGATTTTCTAATAGTGAAAGTGGAAAGGATAGTCATAAGCATAATACTGTTTTCTGAAAACAGAAACTTCAGTGATTCATCTGCAGAATCAGTCATTTTTTGAGTGGGTCTCCTTGCATTAAGGACTGAGGAACGCAGACTGTGCCTTAAGTTATGTGTGGGGAGGTGAATGGGACCTTCAGGAACTTCCAAGTCAGCCTGTCAGTACACGTTGTGTATCTCAGCCACTTCCTCCTTCCAGCCATGAGTAATCACCGAGCAGCCAGAGGGAGTGATTCAGGTACGTTTTGTGGAACCTAGAAGTGTTAGAGCCTTAACAGTAAATACCAGCACTTAATAGCCTGTTCTTCCTTTTTAAAAATAACAGCTTTATTGAGATACAGTTCACATACGCATAAAGTTCATGTTTTTTAAAGTGTACAATTCAGTGTTTTTAGTACATTCACAGTGTTGTGCACCCATCACCATATCTGAGTTCTGCACATTTCATCATCCAAAAAAGAAACCTCATACCCATTAACAGTCACTCTCCATTCCCTTCTCCCAGCCCCAAGTGACCACTCGTCTGTTTTCTGTCTCTAAAGATATGCCTATTCTGGACAGTTCTTACACGTGGAATAACACAATATGCGGTCTTTCATGTTTGGTTCCTTTCAGTTAACGTTTGCAGGGTCCATCCATGCTGTAGCGTGTATCAGTAATTCATTTCTTTTAATGGCTGAATAATATTCCACATTTTCTCTATCCATTTATCAGTTGATGGACAGGTTGTTCCAACTAAAATAAGGCTGCTATGAACATTTATGTACAAGTTTTTGTTTGGTCATATGTTTTCCGTTCTCTTGGAGTGGAATTGTGGGATCATATGGTAACTCTGTGTTTAATTTTTGAGGAACTGCCAGACTGTTTCCCAAAGTGACCGTGCCATTGACATTCCCATTAGCAGAGTATGAGGGGCCTGGTTCCGCCCATCTCCTCACCTGTTAGTCTTGTGTATAGATATCCTAGTGGGTGTGAAGTGGTAGCTCCTTGTGGTTTTGTCCTCTATTTTAAAAAAACAAAAACGGAATTCTGACCGAGGTCAAACAAGACAGAGATCGCAGACTGTGGCTTTGGTAATAGCCACCTTGGGATTACTGACTGGTGAGACGCAAAGGAGTTAAAGTTTGAATTTTGGGGAAGTTTCAGGGCTGGATGTGATTTAGGAGAAAGGTCCTGTCTATAGGGAAGTTACCATGACCTTTCCAGGTCTGGTGAGATTCATGGTAACCACTTTTGCTTGTTTTGAAATATTTGTATTGACCCAGTGGCTTACAAGTAAAATAAACATCTAGTTCTGAATCTTTGTCTTTTGAAGTGACATAGACTACGTGTACCATCTCTGGCAGTCTCCTCATCCCCAACTCTTCTTCCTTGCCTTGTGTCCTTCCTGATTCTTAGAGCTGGCTGTGTTTTTCATTGCATTGCATTTATCTGCTCATCGTGAGCTGTCAGCCTCCATGGTGAAGTCACTGGTCTCAAGACCCTGACTCCAAGCAGGTATTATGTTCAAAACAGATTTTTTATTCCTGTGATGGATGGCTAGTACCTGTTGCCATGCAGTTAGAAATCGGGTAGCAAGCCCTGTAACAACCTCATTCTTTGAAATCCAAATTCCTTCATAGCTTCCTTTTCTGCTCATTAATGACATTCTATTACTGATCCTTGCCTCTTCATAGAAGAAAACTTAGAGTCTGTGGAGCAGTTCCTGTCTGTCACCTTGT EMBV3_17432 AAGGGAAGAACTGTCCAACTCTGGTCTATTAGTGAGGTAGTTAGAGGCTCCTTGACCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02955 TTCGCAAACCCATTAACCTGCCAGTTGTGAAAAAAAGGTGGCAGGAGAGAGAACCAGCCA Variant GeneID:512142|SNRNP35:NM_001075556:138_cdna 589^693 1 EMBV3_06420 GeneID:512142 17 GENE SNRNP35 MGC140223 U1SNRNPBP small nuclear ribonucleoprotein 35kDa (U11/U12) EMBV3_18634 ATGGCTCTCCTGAAGAACATGCAGTCTATGTGTGGGACCATTTCATAGCCCAGTCTGCAG Gene GeneID:617002|LOC617002:XM_002689392:5_cdna Constitutive 1 NULL GeneID:617002 7 GENE LOC617002 NULL similar to CG10038 CG10038-PB EMBV3_17237 CCCGCTACCATCCTCCTTACTTTCCCTGGGCCGTGGTGGTATTCAACTCCTTTTTTCTTT Gene BVT0101_047823 - 1 EMBV3_21372 GK000020.2:23565675-23658801 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40393 CGAAGATGTGTGATCCCCCAGGCCATCGAGCTAGTGGCACTGTGTTCCAGTGGGGAACTG Variant GeneID:534377|SERGEF:NM_001076021:169_cdna 473^533 2 EMBV3_04900 GeneID:534377 15 GENE SERGEF MGC128942 secretion regulating guanine nucleotide exchange factor EMBV3_25003 AGTAGAGTTACTTGGAGGATGTTCTCTGCGCGTATCCAGGTCCACATCGAATGGCATAAG Gene GeneID:540762|NCOA5:NM_001046487:1249_cdna Constitutive 0 NULL GeneID:540762 13 GENE NCOA5 MGC137529 nuclear receptor coactivator 5 EMBV3_33397 CCTGGTATGCAGCCTTCCAAACCCCAGCAGCCATCACTCAATACAATGATTCAACAACAG Gene GeneID:538540|CLINT1:NM_001105417:17_cdna UTR3_Alt 2 NULL GeneID:538540 7 GENE CLINT1 MGC159872 clathrin interactor 1 EMBV3_14752 ATCCTTTGGAAAGCCTATGGGCAGGCGTGCATGTTGGCACTGCGAGTGAAGTCATCATGT Gene BVT0102_381534 + 0 NULL GK000018.2:14738097-14757331 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01097 TCAGCTTAACTTTAACGGAAAAGAGCCGGCGCGGTTATGGCGAATCTGCGGCATCCAACA Gene GeneID:100296964|LOC100296964:XM_002692601:5_cdna Constitutive 0 NULL GeneID:100296964 14 GENE LOC100296964 NULL hypothetical protein LOC100296964 EMBV3_20711 TACAGTGCCAGTAAAGGAGGATTAGTCGGATTTTCACGTGCTCTTGCCAAAGAAGTAGCA Gene GeneID:533020|CBR4:NM_001083717:2_cdna UTR3_Alt 2 NULL GeneID:533020 8 GENE CBR4 MGC138958 carbonyl reductase 4 EMBV3_39873 GGTGGGTTCCTGCATGACCGACCTGGTCAGGTTGGCAAAGATTCCTTTGGCAATGATTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36242 TACAAAGACTAACCTCCCCAATGACCCTGCAGTACCCTCAAATCCCCTGGTTTTCACTGC Gene GeneID:100298118|LOC100298118:XM_002688309:147_cdna Constitutive 0 NULL GeneID:100298118 6 GENE LOC100298118 NULL hypothetical protein LOC100298118 EMBV3_03271 TGGGTGTTCCAAGGCTACAGCGTCACCGGGCCAGCGAGCCTGACGCCATGCATGTGGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29483 TCGCTGTTCACAAGGGAGGTACTTGCATTCCTCCTTCCCCTTGCTCGCGTGTAAATCACA Gene GeneID:512411|ZNF174:NM_001035106:144_cdna Constitutive 0 NULL GeneID:512411 25 GENE ZNF174 MGC127259 zinc finger protein 174 EMBV3_37886 CCGATCAAGCAAAATTCGCCTTTAGCACCACACCTTTGTGTGTCCTACAGAAATCATTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41158 TGGATGAAGTAACGCGACGCATCAAAGTGGCAGGGCCCAATGGTTATGCTATTCTTCTGG Gene GeneID:541044|RBM15:XM_002686184:387_cdna Constitutive 1 NULL GeneID:541044 3 GENE RBM15 NULL RNA binding motif protein 15 EMBV3_05375 CGACCAGTTCTTCATCCTTAAGTCAGCATGACTACAAGAAAAACAGAACCCTCTGTGCAC Gene GeneID:507069|LOC507069:XM_002691807:456_cdna Constitutive 0 NULL GeneID:507069 12 GENE LOC507069 NULL similar to Brca2 EMBV3_36612 CAGCCATGATCTCGTTAACGGACACACAGAGGGCTTCTTTCCTGTGGTTGTTGGCTTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14982 CCAGTAACCAAGGGGCTGGTGTTAATCCAGACCCCCTCCCCAAGTGCTTCCGAGATTAAA Gene GeneID:407118|SLC6A1:NM_001077836:74_cdna Constitutive 2 NULL GeneID:407118 22 GENE SLC6A1 NULL solute carrier family 6 (neurotransmitter transporter, GABA), member 1 EMBV3_28832 GTGCTGGTCCTGGTCTTTGGTGTGCATTACATCGTGTTCGTGTGTCTGCCCCATTCCTTT Gene GeneID:524064|PTH2R:XM_002685525:82_cdna Constitutive 0 NULL GeneID:524064 2 GENE PTH2R NULL parathyroid hormone 2 receptor EMBV3_31179 CGAGGAGTTTTTGCGTTAGCTCTGAGGGCAGCTCCATCCTATGAAGATTTTGTGGCTGCA Gene GeneID:538919|PLEKHA8:XM_002686847:63_cdna Constitutive 0 NULL GeneID:538919 4 GENE PLEKHA8 NULL pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 EMBV3_31723 TAAAGTGAGCGAACAGTCAAGCAGCTCCTCCTTTCCCTGCAGACTCAGAAACTTGGAAGG Gene GeneID:788926|HK2:XM_002691189:104_cdna UTR3_Alt 2 NULL GeneID:788926 11 GENE HK2 NULL hexokinase 2 EMBV3_10219 TTCCCAGCTATGGATACGGCCTATATTAACACACGCCCTCCACCTCACAGATCTAAACCC Gene BVT0102_250479 + 0 NULL GK000020.2:42060656-42067176 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17861 ATCTGATCAAAGATGAGGCCACAAGAATGCCAGCAACCGAAGAGGCTGACTACGTGGTGT Gene GeneID:537241|AGXT2L2:XM_002689027:79_cdna Constitutive 0 NULL GeneID:537241 7 GENE AGXT2L2 NULL alanine-glyoxylate aminotransferase 2-like 2 EMBV3_30173 TCCAAGGGTAGTCTTTGAGGATGTGCCATGCCCCTTCAGACCAGCTGCTTCCATCGGATT Gene BVV0102_129618 + 0 NULL GK000019.2:23212513-23215813 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095788 TCONS_00095787 TCONS_00095789 TCONS_00095790 1 XLOC_057795 Coding TCONS_00095788 XLOC_057795 Coding Coding PITPNA 19:23213465-23249410 j TSS71324 3686 1 TCONS_00095788_2 242 11 0.897757622969063 0.00162092710122146 0.000715043719276958 0.00100765243876457 0.000644640342340269 0.000586699144852326 0.000530945854738228 0.00100286114004259 0.000766590312036076 1.97582242850919e-08 0.000597125232844401 0.000106521783744516 8.18838009797116e-05 5.78437268853227e-05 1.25949448869155e-08 0.00100316938909066 0.00557530705122863 0.00270974801065143 0.00228431148231857 0.000704953347644288 0.000347496216903604 0.000528204732433213 0.000406755856282843 0.00207689523637325 0.00165096578340885 0.00174474485529778 0.00189500155878938 0.00183744253180848 0.000471236268967472 0.000166524622155973 0.00208648780603735 NM_001046582.1 PITPNA Bos taurus phosphatidylinositol transfer protein, alpha (PITPNA), 0.0 1433 99.87 0.215952251763429 NM_006224.3 PITPNA Homo sapiens phosphatidylinositol transfer protein, alpha (PITPNA), 0.0 2432 78.02 0.801410743353228 TCONS_00095788_2 sp|Q2HJ54|PIPNA_BOVIN PIPNA_BOVIN Phosphatidylinositol transfer protein alpha isoform; 5e-177 492 89.63 0.995867768595041 1 coding 1 0 1 1 -1.06664232542949 0.0082648469183513 -0.0209943313893181 0.792379514929152 GCCGGGGCGGCAGGAGCCGGCGCGGCGACCGCAGCGAGAGCGGCGGGGACAGAGCAGACCACGACGAAGGCGCACAGGCAGCCGGGCCAGGCCGGGCCACGGGAAGAGCGGCCGTCAGGAAGCGGGCGGGAGGCTGGACGGGCAGCAGGCAGCCGCCGAGTCGCGAAGCGACATGGTGCTGCTCAAGGAGTATCGAGTCATCCTACCTGTGTCTGTAGAGGAGTATCAAGTAGGGCAGCTGTATTCTGTGGCTGAGGCCAGCAAAAATGAAACGGGTGGTGGTGAAGGCGTGGAGGTCCTGGTGAACGAGCCCTATGAGAAGGACGGCGAGAAAGGCCAATACACGCACAAGATCTACCACTTACAGAGCAAAGTGCCCACGTTTGTTCGAATGCTGGCCCCAGAGGGAGCCCTCAATATACATGAAAAAGCATGGAATGCCTACCCTTACTGCAGAACCGTTATCACAAATGAGTACATGAAAGAAGACTTCCTGATTAAAATTGAAACCTGGCACAAACCTGATCTTGGGACCCTGGAGAACGATTACAAGGCAGAAGAGGACCCAGCAAAATATAAGTCTATCAAAACAGGCCGAGGACCCTTGGGCCCCAATTGGAAGCAAGAACTTGTAAATCAGAAAGACTGCCCATACATGTGTGCATACAAACTGGTTACTGTCAAGTTCAAGTGGTGGGGCCTGCAGAACAAAGTGGAAAACTTTATACATAAGCAAGAGAGGCGTCTGTTTACAAACTTCCACCGGCAGCTGTTCTGTTGGCTGGACAAGTGGGTCGACCTGACGATGGACGACATTCGAAGGATGGAAGACGAGACGAAGAGACAGCTGGATGAGATGAGACAAAAGGACCCAGTGAAAGGCATGACGGCGGATGACTAAAGCCACTCCCCCCCTCCTGCACCTTTTGCAAGCCAGTGGTCAACAGGAAGGCCCAGCAGCTCCACGCTCCCGAGTGACAGGCCATCTCCGGACGCAGCCTTCTGTGCCCATTCTTCAGGCAACTCTGACCCCTTACCGTAGCTAATTCTAGATGCCCTTTACTGTTGTGAACAAATAGACCGTCTGGTATTATGCAGCCCGTGTGAGCGGGAACCTGCCCCTCTGAGATGCGTGGCGTTGTAGGCGGCTGTATTTACAGCGCCTCCCTCTTCAACCATTGTGTTCTTGACCCATTTCTGTGTGCCCTGCCCACCCCCCTTTATTTCCAAGTGACATTTTTAGTCTTTGAAAATAGCTACCTTTTGTGATGTGGTGATTTAAAGGATTTACTTTGTTTTCAACCTTGGGATAAACTGAAGTGTTTGGCTTCCTGGGCAGGTCTTCGCAATTTTGAGTGCTCACAGGGGGAGAGGGGATGAGGCAGAAATAGATTTGTTTCCCCCCCAGTTGCCCAGAACATCAGTGTGGCTTCGTAATTCTGATCTCTGCTCCTAGGAACCCACTGTTAAGAGTGCTCTAGGCACCATGGAAGTACCCAAGGCCCAGCCAGTCTGTTTTGAAAATTAAACAACAGATAACCCCTGCTCCAGTCATCGCATCGCTGGTCACTCGTCTTAGAAATACCTATGGCTCCTTGGCCCTCCTGTTGCCTACTCTGTCTGAATCTCTGCAGAGCCTGTAATATGCCCGGGTCAACTCTCCTGGAGGGGACTGTCCCACGTGGCCCTTAGAATTGAGTCTGCCCCATATATACCTAATAGTGTGCCCACCCCCCAGCTCCCACCATCCCCAGGAGCTCTGTGTCCACACTCTTCTTCCCTTTTGGGCTGGTGCTGCCACTCAGCAATAACCCCCTCCTCTCTGTGCTTTCTTAGATTCCTGTCCTCTGTCTGAGGCTGGTCAGGACACAAGGGGTCTTGATCTTTTCATGCTGCACAAAACAAGCATGCAAAAAGCTTTTTCCCAGAACACGTTCCCCCCTCCTCTCCAGTGGCCGGAAAGGATCAAGATCTCAGCTTGTCCTGCCCCCATGCAGAGTTCTGCCCTGGACAATCAAGAGCCAGGAGTGATCGCAGTGGCGAATTCTACCAAAGTTGGCTGGTGTGAAAGCCCAGGCCTGCGGGGGAGCAGAGGCTGCTGAGGGCTTCCTAGTCGCCTGTGACTTGGCAGCGCTGGAGTACGCCTTCCCAGTGGGAGAATCTGAGATAGCTGTGGTGTCACTTGACATCTCCCGAGCCTCGTGAAGTTTGTTGGCCAAGTGTGCAGTGACTCAAGCTAACGAGAGACCAAATCTCTGTTAGGGGAGCAAGAAGCAGAATGGGATGATCTGTCCTTAGGTTTTTGTCAGTTTGTTTTGCCTTACTGATTTCTAAGTGCAATAAGGGAGTGTCACGTCTGGGACTTCCTGATGGCTGCTTCCCTGTGGCCCCCCTGGGGCAAGGCAGGGGGGACAGGTTCAGCGTGGTTAGCTCCTGCCTTCACTGAGTCCCCTCTGGGACCACAAGATACCCCAACACACCTTCCTTTTAGTCTCCGCACCTTGTGGGGTCTATAGTAATGGATCTGGGGCAATTCATTTGGTTATTAGCAGCCCAACTGCTGGTCGCATTTGACAGGGCAAGTTGAAGTGGCATTCCTACTGGAGAAAAATGTACATGTTTTCCTACAAGTTCTGTAATAGCTGTAATTATATTTGTGCTTAAAGCTTTCCCTTCTTTCATTCATCAACTAAGTGAAGTCCAGATGTGCGTTAGCCTGGGAGAAACAAGCAGTGATAATGGAAGCAGACGATTGTTTACGTGGTTTGAGGGTCAGCAGATGTTGGTCTTCTTCCTTCAGTTCTTCTCTGAGATTCATACATATCACTCCAACTTGGGGAGCAGCGGGGCTTGCTCTTTGTGGGCCTTTTCTCTAGCTCCACCTGCCTCCACCTGTTGCCCCAGTTCAGCATCCATGTGAGCTGATTCAGAGGTCAGCTGGATCTGGGGCTCCAGTCCACATCAGCGTAAGGAGGGATGAGCCTGGTCTATTCTGTCCCCGTGGAGAGTGTCGCTGCTGGGCAATGATACCTTTTAAGTACCTCCCTTCCCTTCTTACTTACCCTGCCCAAACTGACTAGCACTCAGAGGGGCTTAGGATGCAAGGCTTAGCTCCAAGGGTAGTCTTTGAGGATGTGCCATGCCCCTTCAGACCAGCTGCTTCCATCGGATTTCCAGGGCCGCAGTCCCGGTTGGAAGCAGCGGTGCCTCTGGGGGATGAGGGGTGCTGGGCTCTGGGCTTCTCACGGAGAGGCGTAGGGGACAGGGTCAGTATTGTGGGCACGTGTATATCTTCCCCAATTCTCTTACAGTCCCTGCTGGGACTCCCTGACTTATTTTGGTTGGTTCCTAGTGCTACTTCTTTTACAAAATACACTTTGTAGACCTGATTAGATTACCTTGTTTATTTAATGTGAGTTTGTGCCTTTTTGTCTCAATCTTCCAATACAGGTATATTGGGGGGAAAAAAAAGCAGTCTAATAAAATCCTAGACAGAGCTGTCTGGAGTCCAGCTTATTGGTGATGTTCTCATGTCTATTTTACAACTTAGATATCCTCAAACTCTTGCTGACATCCCCCATTTTACCAGGGAAGGATTAGAAAGATCCAAGATACCTCTAGAAATTGTGGCACATGGATTTCTGTAAACTAAGACAATCGCTCATCATTTTACTTATACAAACATC EMBV3_28714 GTAGTACTGACTAGGAGATGTTCTTACTGTTTCCTTGAAGCTTTACCTAGAAATAGAAAA Gene BVV0102_174336 + 0 NULL GK000021.2:57008399-57075108 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121686 TCONS_00121689 TCONS_00121685 TCONS_00121690 TCONS_00121693 TCONS_00121687 TCONS_00121688 TCONS_00121692 TCONS_00121691 1 XLOC_073451 Coding TCONS_00121693 XLOC_073451 Coding Coding TC2N 21:57073098-57117727 j TSS90579 4267 1 TCONS_00121693_2 490 0.123505976095618 12 0.904656269606525 0.00180189176506281 0.00248872857213127 0.00106089673939876 0.00119150259093307 0.000574514554380621 0.000695018152240783 0.00150171046465152 2.51244023244428e-10 0.00136483936670074 0.000190836380258562 0.000153640520747128 0.000302645179381022 1.10470631002137e-14 0.000101763347214103 2.75391614357065e-17 0.00376438445764514 3.79711831706882e-05 0.000235731273811653 0.00195222933377767 1.65440332400436e-09 1.26103020739637e-11 1.36561205936057e-09 0.000960735681512454 0.00115964378808225 0.00330298661677146 0.00273640369724388 0.00134666276456867 0.000337163111470919 1.93409406017967e-13 1.9307662755006e-13 XM_005222222.1 TC2N PREDICTED: Bos taurus tandem C2 domains, nuclear (TC2N), transcript 0.0 7418 100.00 0.963674712913054 NM_001128595.1 TC2N Homo sapiens tandem C2 domains, nuclear (TC2N), transcript variant 0.0 2987 83.03 0.647761893602062 TCONS_00121693_2 sp|Q8N9U0|TAC2N_HUMAN TAC2N_HUMAN Tandem C2 domains nuclear protein; 0.0 909 91.02 0.997959183673469 1 noncoding 1 1 0 0 -0.201590690577821 0.380680749984958 -0.0107433018261818 0.828125713665618 GAGCGGACCTGGAGAGAGGGCGGGGCGGTCTTCAGGGGACGGGGGCGGGGCCTCAGGGCGCGGTAGCGCGAGGTGACCTGAATCACGGTTCCCGCGGGCGGCGACGCCACAGCGCCCACTACCTCGAGCAGATTAATATTAAAATCGGAAGTTTGTATCTTTTGCTGGATATTGGAGATTTAATGTAATGGCAACAGAATTTATAAAGAGTTGCTGCAGAGGATGTTTCTATGGTGGAACAGAAAAACACAACTTATCTGTGGAAAGAGACTTTAAAGCAGCAGTATCACATAGTCAAAATACTACTATCTCTATACCCCCATTGACTTCTGTTTCTGTAAAGCCTCAGGTTGGCTGTACTGAGGATTATTTACTTTCCAAGTTACCATCTGATGGCAAAGAAGTACCATTTGTGGTGCCCAGGTTTAAGTTATCTTATATTCAGCCCAGGATGCAAGGAACTCCTTCACAGTTGGAAGAACTAGAAGGATCTGCCAGAGCATCATTTGGAGACAGAAAGGCAGAACTTTCCAGTTCAGCCCAGCAGGGACCCAGCTATGATGTATATAATCCATTCTACAAGTACCAGCACGTGTCACCTGATTTGAGCCGGCGCTTTCCTCCTCGTTCTGAAGCAACAAGACTATATGGATCGGTTTGTGACTTAAGGACCAATAGACTTCCCAGTTCCCCTGGGCTAAGCAAGTCTATGTTTGATCTTACAAGTTCATCTCAGCGGTTCATTCAGAGACATGATTCATTGTCCAGTGTGCCTAGTAGTTCTTCTTCGAGGAAAAATTCTCAGGGGAGTAACAGAAGCCTGGACACAATTACTCTATCAGGAGATGAAAGAGACTGGGGGAGATTAAATGTGAAAGTGTTTTATAATTCTTCAGTAGAGCAGATCTGGATCACAGTTTTACAGTGCAGAGATTTAAGTTGGCCCTCTAGGTATGGAGATACTCCTACTATTTCTGTAAAAGGAATACTAACATTGCCCAAACCAGTGCATTTCAAATCTTCAGTCAAGGAAGGCTCTAATAATATTGAATTTATGGAAACTTTTGTATTTTCTATTAAACTCCAAAGTCTACAAACTGTGAGACTTGTATTTAAGATTCAAACCCAAACTCCCAGAAAGAAAACCATTGGAGAATGCTCATTGTCACTCAGAACTCTTAGCACACAGGAGATGGATTACTCTCTGGACATATCACCACCTTCAAAAATTTCTGTTTGCCACGCAGAACTTGAACTAGGGACTTGTTTTCAAGCAGTGAATAGCAGAATTCAGTTACAAATTCTTGAGGCACAGTACCTTCCAAGTTCATCAACACCCCTAACTTTGAGTTTTTTTGTGAAAGTGGCAATGTTTAGCTCAGGAGAGTTGATTTATAAGAAGAAGACACGCTTACTGAAGGCCTCCAATGGAAGAGTAAAGTGGGGAGAGACTATGATTTTTCCACTTATACAGAGTGAAAAAGAAATTATTTTTCTCATTAAGCTTTATAGTCGAAGCTCTGTAGGAAGAAGACACTTTGTGGGACAGATTTGGATAAGTGAAGACAGTAATAACACTGAAGCAGTGAGCCAGTGGAAAGAGACAGTCACACATCCAGAAAAGGTTGTTGTTAAGTGGCACAAATTAAATCCATCTTGAAGACGCCGCACATTAATTTGGTGACGAACTTGGCATTCTTTTCGAGGACTTATGATTTTAATTTGCTACCAATTTAAAGAAACAAATCAGTACATTTATTTATGGAGGCCATATTACAGTAATATAATGGATCTAATAGAAAATTAAACTTGGTAAAAAATGGGATGAATTATATCAGATACCCAAAGTAAAGGAAATGTTTTAGACAGTAGGGCAACTAAATAAATTATAAAGTCAGTAGGAATATCAGTCATAGATAGTTACTGCTGTATAATAGTTATGAGTATTTTAAAGCTTTACATAGATATTAAAAATCCAATATATCAAGTCTCTGTTAGTACAAGTGGACATATAGAAGACTGCCACTGTTTCAGTGCTAGTCATTATTGATTATAGCTTAACTCTACTGTTTTAACTCCTTGCTACATATTTTCCCTCAGAAAGCAAAAATAAATTGAACCACTTCAACTCTTCTTATTTGGGGAAACTTTGTGGCCTATGTTTATCATTATTTACCCATAAGTTGTCACATTGCCGCTTTATAAGCTATTTATCTCTAAGAAATCTCAGACATAGAAAACTACATTTTGGCAAGAATAGAATAAATGAAAACACCATAAGGTTGAAGTTTAATTGGAAATTCAGTGTACACACATTTTTCTGTAAGGTTATCATCCATATAGCCCATCCTAATTAGCAGAATTAATTGAACTTAAATAACAAATTCAATATTTTATGATAATCACTTATTTGTTTTTAGTTTTTTAAATATAAATTACTTGTTCTATAATCCACAACATTAGAATATTTTCCTATGTTTTAAAACTGACCATACATGATAACATTATGTAGCAAATACATATTTTCTGTTACAGTTTTTCTCCGGTACTCACTACAACTCAATATGTAGGGATAATTTCAATTTAGTTGGTCAGACAAGCTGTGATCAAAAAAACACATTTGGAGAAATCAGTGATACCATTCCTGATCTTGGAAAATATGACTTTATTTTTGCTAATGGGTAGTCTAAGTGATTCATCTTCTATTTTTTTCTCTCTTACCTTGTCCCACACATGCCAACAGATAAATAGTGATATTTTAGGTCAGAAGTATACTTTGCTGTAATTTAAGCATGCCCTTTCTTTTTTTTTTTTTTTCTAATTCTTGTTCTGTATATCTCATTCAGTTCAGTTCAGTTCAGTCGCTCAGTTGTGTTCGACTCTTTGCAACCCCCTGGACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCAAACTCATGTCCATTGAGTAGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTTCCACCTTCAATCTTTCCCAGCATCAGTTAAGATTTCCCAAATAAACACTAATTCCCCTTTTCCTGAGTACCACCTCCTCAAGCTACAAAACATGCATAGTTGACATGCCCTTTGCTTCTGCTTCTAGAGTTACGGTATACTGGAGGTGTTGACAGGTACTCTCTGACACTCTGCTTTTTGAAATAATTTTTTTTTAGATTTGTGAAAAATGGCATATTGGTGAGTACTCATGGACTTTCAAGAGAAATCACCTTGAGAGGAGGTGTTTTGAGTCTTTAAGACACATGGCAGTCATTTAAAACAATTAAAAAAAATAGACTTTATTTTTTTAGAGCAGTTTTAGATTCACAGCAAAATTGAGAGGAAGGTACAGAGAGTTCTCATATACCCTCTACCCCCACATTTACACAGCTTTCCTTGCTATCAACACCTTGCACTATAGTGGTATATTTCTTAAAATCACTGAACCTTCATTGACATATCATCACCCAAAGTCCATAGTTTATATTAGGGTTCACTCTTTATGTTGTACATTCTATGAGTTTGACAAATACACAAATGACATGTATCCACCACTCTAATTTCACGCAGAGTAGTGTCACTGCCCTAAAAATTCTCTGCAAATACAACCATTTGAATAGTTAAGAAAGAAGTAAATGTATCATTGTCTTTTAGATAAGTAACAGACTGTATTGTTTTTTAAAAATCTAGAATTTTATTTTAGCAATTTTTTTGTGTACTAGTAATGCTTTCAATTCCTAAATTTATTACAAGTAGTCATGTATTTAATGAAACTTCTAATTATTTTAATTATCAATATTTTGAATATGTGTGTAGTGTATAATTTGAAGGAAAGATACAACGTCTTGGTTTCTTGTGTGTCTTAGAATCCTAGGTAAATAAAAAAATTAAAAGAAAATCTTTGTATTTTAAGGACTTCAGTTAGAGAAGTGTTTGACCCAACTAAGATCCCAAATATTTTAATTAGTGTTTACTTAAGCCTTTTTCAAATAAAGTAGTACTGACTAGGAGATGTTCTTACTGTTTCCTTGAAGCTTTACCTAGAAATAGAAAAAGAAATACACTGTTGTATTAATAGCTACTCATGAGAAAAAACATTAGAAACTTGTAATAAAAATTTAAATACTATGCAAAAAATCACTTCTCTTTGTACTTACTTGGCATTTTTTACCTTTACCCACTTATAAATGAGAGGGAACTAAAATGATGCTGGGCAACCGAGAAAAGCAGGGAGAGTTCACAT EMBV3_32881 GCTAGAGGAGAAATGGAAGAGGAGGCCCTGGTAGAAAAGAGGGGGGTCCTAAATGAGACT Gene BVV0101_008297 + 0 NULL GK000003.2:22790540-22880134 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08371 TGGCTTATCACTCGGGCTACGGAGCCCACGCAATGGCCTTCATCACCTACGTGCTGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37783 GTAATTTAGCAGATGGTTCCGTGAGAAGGCAGGAAGATGGTCTGAGCTTGGGCTACTGTC Gene BVT0102_123317 + 1 EMBV3_14860 GK000025.2:37330863-37348779 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147162 TCONS_00147161 TCONS_00147163 1 XLOC_089313 Coding TCONS_00147161 XLOC_089313 Coding Coding - 25:37338149-37344910 - TSS109877 5001 1 TCONS_00147161_3 310 0.533293341331734 2 0.260502958579882 3.09482623363158e-92 0 1.39390407638061e-06 1.73617121972129e-05 5.58172063728815e-06 1.91244996485975e-177 2.23832551491308e-73 8.5668943362885e-127 9.32107965126138e-112 5.89929990876346e-22 1.49372961773625e-20 3.69750027415766e-05 2.26624794736673e-11 1.91073401050555e-11 8.93708387967496e-07 6.13758362765133e-45 0.000667614298354467 4.61424994218594e-22 1.34391954014632e-11 5.27071871095182e-12 2.10396233720085e-24 4.53076416958711e-39 8.27589887884949e-25 6.85544597377475e-22 9.48881124747643e-35 2.61614304145412e-144 6.944441353439e-06 1.04432413279389e-42 1.23316953080298e-70 5.92910519561702e-54 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 2008 89.52 0.296540691861628 NM_145115.2 ZSCAN25 Homo sapiens zinc finger and SCAN domain containing 25 (ZSCAN25), 0.0 818 82.62 0.162767446510698 TCONS_00147161_3 sp|Q6NSZ9|ZSC25_HUMAN ZN498_HUMAN Zinc finger protein 498; 2e-158 458 82.12 0.880645161290323 5 coding 0 0 0 0 -0.172178165340361 0.293228050382057 -0.0126845140690875 0.806491360009784 ATGTCGAGGTGGCTTGGTACAGACAGCTGCGTTCACTGGCCCATCCAGCAGTCATGAAGCATCTGTCCTGAGTCAGTCCCTGTGCCAGGCTCCCAGAGACCCAGGGCAATAAACCAGGCTGAGGTGGAGGGCACAGTGGGAGCAGGGACAGTGACCTGAGGGAGGATGTGGAAACATTGCTGGAACAGGTTCATGATCCTAGGGAAGCTGAACATCTCGACGACTGTAGAATAGCATGTGTAACAAGGTCATGTGTAAGTAAGTGTGGAATAAACAGTGCTAATTGAATGCATGTGCTGTAGAGACCCACAGCGGGGGAGAAATCAAGGTGTGTTCCTTAGAGGATGGCATTGAGTCAGATTTTGAAGGAAAGCACAGGGTGACTTAGTAGGAAATTAAGAGGGAAGGCATTGTAATTTAGCAGATGGTTCCGTGAGAAGGCAGGAAGATGGTCTGAGCTTGGGCTACTGTCACAAAATACCACCAAGTGGGTGGCTTTAACAACAGACACTTAATATCTCCCAGTTCCGGAGGCTGGGAAGTCCCGGATCCAGTTGCTGGCACATTTGTTGTCTGGTGAGGGCCTCTCTTCCTGGTTCACGGGCAGTTGCCTTCTTGCCAGTCCTCATGTGGCAGAGGGAGGGAGAGAGAGATCTCATGTTTCTTCCTCCTTTTTTGTAAGGCCGTTAATCCATCACGAGGGCTCCCACTCACATGACCCCTGTGTGCAGAGAGCCAGCCCTGGCTTCTGCTCTTCTGGGACGTGGTCCCATCCTGGGGGCTCCACCCCCAGACCCTCACCTAATTAGGGTCCAAAGGCCCCACCTCCTAACAGCAGCCCCAGGGGCCTGAGAGCTTCAGCCTGTGAATTTTGGAGGGAACCCAAACATTCAGTCCATAACAGGTGGAAAGAAGTAAAGGAATGTCTGGTTTTAGAGTCAGAGCAAGTGAAATGCACAGAGGTCATTGGTAGTTGTTAATGGGACACGTTAGAAGCCAGGTTCTGGCTAGAAGTTTCCCTTCAGATCTCTTCAGCGTTGGTCTGTATCTCCTTTGTCCTGTAGGCCTGGGGAGCAAGGACAAGGAGGCAAAGACCCAGCTGGCAGACCCCAAGGGGCAGCTCGCTTGCGGGCGGGCAGAGAGGTGTGGGGAGGCCGCTCTCCAGGGCCCGGAGTCGGGAAGACCAAGCGAGCAGCAGGCCGGGAGCTCGGTGGGAAACGCGCCCGGGCCGCTCCTGCCCCAGCACAGCGTTGCCCCGCTGCCCGATGACCTCCAGACCCACAGCTCCTTCTGGAAGCCTTTCCAGTGCCCTGAGTGTGGGAAAGGCTTCAGTCGGAGCTCCAACCTGGTCCGACACCAGCGGACGCACGAGGAGGAGAAGTCGTACAGCTGCGGGGAGTGCGGCAAGGGCTTTGCGCTGCGCGAGTACCTGCTGAAGCACCAGCGGACGCACCTGGGCCGGCGGCCGCACGTGTGCAGTGAGTGCTGGAAGACCTTCAGCCAGCGCCACCACCTCGCGGTCCACCAGCGCAGCCACACAGGCGAGAAGCCCTTCCAGTGCGCGGACTGCTGGAGGAGCTTCAGCCGCCGGCAGCACCTGCAGGTGCACCGCCGGACACACACCGGCGAGAAGCCGTACACCTGCGAGTGTGGCAAGCGCTTCAGCAGGAACGCCAACCTGGCGGTGCACCGGCGGACCCACACGGGCGAGAAGCCCTATGGCTGCCAGGTGTGCGGGAAGCGCTTCAGCAAGGGGGAGCGGCTGGTCCGGCACCAGAGGATCCACACCGGGGAGAAGCCGTATCGCTGCCCGGCCTGCGGCCGCAGCTTCAACCAGCGCTCCATCCTCAACCGGCACCAGAAGACGCAGCACCGCCAGGAGCCCCCGGGTAACCATGGTGTTTACATTTGACTCAGCAGAAGACGTCCTGGCCCTTCAGTTGTCCCCGTGAGGCTGTGAGTACTGTGAGACGTCCACTTTCTGAGATGCTGGACTGCCATTTCCCAGCACTGTTGAGTCCAGGTGCAGAGTCAGCTCTTTTCTGCCTCACGCCTCAGACAAGCCAGGCAAGGCTCATAGCCACCTGAAGTCCAAACCCAATGACAGGCTTCCCTCAGCCTCTGGCTCTAGTCTGTAGGACATAGGGGCTGACCTGACCCGAGTTTGGTCTTTTCTGAGAGGTGTGTAGGGGGCATGGGCCAGCATGGGTTTGGCGTTGCTCATCAGTGGCCTTCTGTTTACCTGAATTAAATGGCAGATTCTCTGAGCATACACTGGGTTTTCAGCCAGTTGGGATCTCAGAAGGGAGCTTCTGTAAGAGTAAGAACTTGCTGTCTTCCCGTGTGGACTCCCTTGTTTGCTTTGAGACCAAAGCTTACTGACGGTTCCTCCAAAGAGTCCCAAAAGGAACATTTTCCCATAGAGCTGTAGTAACCTTATTTTTGATAGCTATTCAAATGCCAAATATTGTTTTCTGTATTTTTCTATTTAGGAATTTTTTTAGAATAGAGAATTTCAAACATACATAAATGAATCCTCATGTATTCATCATTTAGCTTTAACCATTTGTTTATGCATAGCCAATCTTGTTTCATTTCTGCCCCGTCCTCCTCTTCATCTTCCTCCCCAGCTGAAGTATTTTGAAGCAAATCTCAAATGTTTATAGATATTTCAGTGTATACTGCTAAATGTTAAGGATTCTTAAAAAAATTATAATAATAACTACATTGCTATTATCATACCTAAAAAATTAAATAGTTCCTTAATTCCCAATTAATGTACTTAAAAAAGAAACCACATGATTTTTAAAAAGCTCCTTTAAGATCAAAGTAAGATCCATAAATTGTAATTTGTTGCTTGTCTTCTAAGTCTGATATATCTTTTCCCCCTTGATATATGCTTTTCTTTTTTATTTGGCCATGCTGCATGGCTTGTGCGATCTTAATTCCCCAACTAGAGATTGAACCCATGCCCCCTACAGTGGAAGCACAGAGCCCTCACCACTGGACCACCAGGGAAGTCCCTTCCCTTGAAAATTTATTTGTTAAAACAACTGGATTATTTTTCCTGTGGACTTTCTCACATTCTGAATTTTATTGCTTGCATACTCATGGCATAGTTAAATATAGTTCTCTGCCATCTGATTAACTAAAAACTGCAGGTGTAGAGGGCTAGTCAGGTTCATGTTTCACATTTTGGCAAGAACATACTACAGATGGTGGCTTGTCTGGGTTGTTTCTCATTATATAATGTTAAGAGCCTAAATGTGAAGTCAAGTGGGCCTTAGGAAGCATCACTATGAACAAAGCTAGTGGAGGTAATAGAATTTCAGTTAAGCTATTTCAAATCCTAAAACACGATGCTGTGAAAGTGCAACACTCAGTATGCCAGCAAATTTGGAAAAAGCAGCAGTGGCCATAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGCTCAAACTACCGCACAGTTGCACTCATCTCACATGCTGGTAAAGTAATATTCAAAATTCTCCAAGCCAGGCTTCAGCAATACGTGAACCGTGAACTTCCAGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCACTGGACCATGGAAGAAGCAAGAGAGTCCCAGAAAAACATCTATTTCTGCTTTATTAACTATGCCAAAGCCTTTGACTGTGTGGATCACCATGAACTGTGGAAAATTCTGAAAGAGATGGGAATACAAGACCACCTGACCTGCCTCTTGATAAAATTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTATGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTCTATGCAGAGTACATCATGAGAAACGCTGGGCTGGAGGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGATATCACCCTTATGGCAGAAAGTGAAAGAAGAACTAAAGAGCCTCTTGATGAAAGTGACAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACTAAAATCAAGGCATCTGGTTCCATCACTTCATGGCAAATAGATGGAGAAACAGTGGCTGACTTTATTTTTTTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGAAAAGTTATGACCAACCTAGACAGCCTATTAAAAAGCAGAGACATTACCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAGTAGTCTTGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGATTCTTGAGAGTCCCTTGGAGAGCAGAGAGATCCAACCAGTCAATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATGTTGAAGTTGAAACTCCAATACTTTGGCCACCTGATTCGAAGAGCTGACTCATTTGCAAAGACCCTGATGCTGGGAAATATTAAAGGCAGGAGGAGAAGGGGAGGATGAGGTGGTTGGATGGCGTCACCAACTCAATGGACATGGGTTTGGGTAAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCATGGAGTCACAAAGAGTTGGACATGGCTGACTGACTGAACTGAACTGAAGAGCCTAAATGCATTTATTTCACTAATTCTATAAAAGAATCTTCATTTATTAGCTGGGATGCCTCACAGCTGTATCTGTGCACTCATACAGTTCACAGAGGAAAGGAAATACTGGATTCTTCGTTCCCTTATTTACCCATCTTCACAATAATGATCTCGTGGCTTTTCTCCTAAACTAATCACCATGAAAGTGGTCAGTGATTATTATTTTTTAATAAAAAATGGATTCTTGAATTTAACCAATCCAT TCONS_00147167 TCONS_00147168 s 3' 5502 TCONS_00147167 TCONS_00147168 s 3' 1853 EMBV3_37411 TGGAGGCCCACTTGCTTACGACATTGAGATTATTTAAGAGTTTGGCCTTCTCCCTCCAGG Gene GeneID:514205|SAMD9:XM_002686655:86_cdna Constitutive 0 NULL GeneID:514205 4 GENE SAMD9 NULL sterile alpha motif domain containing 9 EMBV3_21979 TGTAGATGACTACTTGGGCCTCGGGGGGTGGGAGGGATGGGCAGTTGTTTAGTCATTGAT Gene GeneID:539941|MAPK8:XM_002698954:73_cdna Constitutive 1 NULL GeneID:539941 28 GENE MAPK8 JNK1 mitogen-activated protein kinase 8 EMBV3_37356 AGCAGCAAAGAAAAGGAAAGCAAGTGTCCATCTTCCACGCATTGGACATGCCACGAAAGG Gene GeneID:524787|CHD1L:NM_001037820:74_cdna Constitutive 0 NULL GeneID:524787 3 GENE CHD1L MGC128792 chromodomain helicase DNA binding protein 1-like EMBV3_07934 CTTCTACCTCAGAGATCAACTGCACAAACTGCTCAGAGTCCTGCCACCTCATATGGATGC Gene GeneID:520706|LOC520706:XM_002699831:2_cdna Constitutive 0 NULL GeneID:520706 X GENE LOC520706 NULL similar to preferentially expressed antigen in melanoma-like 3 EMBV3_10283 AGGTGTTTCTGATTCTCAACTGCCTTGCAGATTTACTATTCTGAAGGTGGACAAGCTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31632 ACCACATCCTCTGGATTGCAGCTCTACTTGTAACAGTGGTCGTGAGTGGGATGGTGTTTC Gene GeneID:414345|CD86:NM_001038017:26_cdna UTR3_Alt 2 NULL GeneID:414345 1 GENE CD86 NULL CD86 molecule EMBV3_02676 TCCCTTGTGGAAGGAGAGGCAGCCAACTGGTGTGTGTTTGCAAGCATGTATTTGGAAGGA Gene BVT0102_222924 + 0 NULL GK000028.2:2361687-2392187 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37879 TGGGAGCATCGTCATCCCTGTCTGTTACCTCTGCATTTGTGGCTCTATTTGTGACCTCAG Gene GeneID:510165|HPS5:XM_002699087:70_cdna Constitutive 0 NULL GeneID:510165 29 GENE HPS5 NULL Hermansky-Pudlak syndrome 5 EMBV3_35215 TGCCAGTAATGGAGTAGCTCCCTCTTTTGGACCTGGCTCAGGGGGCTGGGATTTTGATAT Gene GeneID:515771|B4GALT3:NM_001015609:281_cdna Constitutive 1 NULL GeneID:515771 3 GENE B4GALT3 MGC143068 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 EMBV3_34463 CAAGAGCTCTAAAAACACAGCTATCTCAAGCTGAAGTACATAAAGTCTCAAGACCAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38865 GGTGGCCTAAACAAAATGGATGAGGATGTCTTTCTTACCTGATTCAACTTTTGCTCTTCC Gene GeneID:540450|CYTIP:NM_001102243:139_cdna UTR3_Alt 2 NULL GeneID:540450 2 GENE CYTIP MGC179355 PSCDBP cytohesin 1 interacting protein EMBV3_00679 GCTCGGGGCCTTGCAGACGCTGCTCAGCCGATTTTGGTGCCTCTGATTTTGCTACGACAA Variant GeneID:617809|BCL2L13:NM_001078082:100_cdna 570^639 1 EMBV3_39155 GeneID:617809 5 GENE BCL2L13 Mil1 BCL2-like 13 (apoptosis facilitator) EMBV3_30201 TGACGGTGTGAACATTGCCTACTTCAGATTACTTACCACTAAGCCACCTAGGGCATCGGC Gene GeneID:100295252|LOC100295252:XM_002691534:580_cdna Constitutive 0 NULL GeneID:100295252 11 GENE LOC100295252 NULL similar to histone cluster 1, H2bd EMBV3_38169 ATGATGAGAACTACATCCCCAGTGAGCATGCCAGGACATCACAGGTGATATTTACTATTT Variant GeneID:514284|CEP164:XM_002693001:184_cdna 150^261 1 EMBV3_43134 GeneID:514284 15 GENE CEP164 NULL centrosomal protein 164kDa EMBV3_21014 GATCGAATCCATGTCCTCTGCATTGGCAGGTGGATTCATAACCACTGGACCAGCAAGGAA Gene BVV0102_052608 - 1 EMBV3_15529 GK000029.2:44170097-44189277 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33012 TACATGAAACCCAAGAGCAAGGAGGCCCGTATCTCTGACGAGGTCTTCACGGTCCTCTAT Gene GeneID:615852|LOC615852:XM_002689682:105_cdna Constitutive 0 NULL GeneID:615852 8 GENE LOC615852 NULL similar to olfactory receptor Olr834 EMBV3_03402 CGACGTGTCTTCCAGTTGCACATGTGTGAGCTTTTTCCAAGATGGCTTGAAGGCAGCTCA Variant GeneID:523797|ASAP3:NM_001083446:194_cdna 624^709 1 EMBV3_26837 GeneID:523797 2 GENE ASAP3 DDEFL1 MGC155101 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 EMBV3_23270 AGGTATGCACGTATTAATGTCACTGATTTAAGAAATTCCCAGTGGTGGCCTGCCTAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12652 GGGGGCCCAGTAGGTGACTAAGGAGAGCTCACAAACAAAAGATTACTCTTCCCCTGTATC Gene GeneID:100336604|LOC100336604:XM_002683609:13_cdna Constitutive 0 NULL GeneID:100336604 2 GENE LOC100336604 NULL R3H domain 1 (binds single-stranded nucleic acids)-like EMBV3_10368 CAGGGGCACTTTAAGTCTCTATGGACTGTGACGGTGGGGGTGAATTTAGGGCCCTTTACT Gene GeneID:504861|LOC504861:XM_002695344:67_cdna Constitutive 0 NULL GeneID:504861 18 GENE LOC504861 NULL similar to cationic amino acid transporter 5 EMBV3_35474 CAGACACAGGAAACATTCAGTGTGAAGTGAGTCCAGCAGGTAAGTAAGCCCAATGAGCTC Gene BVT0102_114536 - 1 EMBV3_34051 GJ058531.1:1-7665 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30194 GCCAGTCACCTCGGACATCTCAAGTGAGTTCTTACCTGCCTTCTAATCTGTCGGAACTAG Gene GeneID:781199|KIAA1383:NM_001098148:120_cdna Constitutive 0 NULL GeneID:781199 28 GENE KIAA1383 NULL hypothetical protein LOC781199 EMBV3_10374 TGAATACGCTGAGTTCCTCTAGCTTGCTTACGAATGCAGACTATACCACCGGGCAGGTCT Gene GeneID:507179|COPS5:XM_002692691:88_cdna Constitutive 0 NULL GeneID:507179 14 GENE COPS5 NULL COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) EMBV3_23248 TCCCCACCCCCCAACCATACCCTCTCATTTTAGAGCCAGGTGTGAGGGTCTGAGGAATAA Gene GeneID:513565|PLCH1:XM_002684989:98_cdna Constitutive 0 NULL GeneID:513565 1 GENE PLCH1 NULL phospholipase C, eta 1 EMBV3_34683 AATTCAGCACTCGGCTGTTATGATGGACATGCCTATGAACGTCTGTTCCAGTGGGCTCAG Gene GeneID:514969|ACOX2:NM_001102015:172_cdna Constitutive 1 NULL GeneID:514969 22 GENE ACOX2 MGC159638 acyl-Coenzyme A oxidase 2, branched chain EMBV3_41081 TTTGATTGAGAGGAAGGAAACTAACCGAAAGCTAAATTGCCTCCAAAACCATCGTCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15959 TAAAGTTGACAGGCGACGAATTTGCTTCTGCGCCATCTTCCGTTGGACGCTGTCTGGCCA Gene GeneID:767916|MGC127695:XM_002688236:38_cdna Constitutive 0 NULL GeneID:767916 6 GENE MGC127695 NULL hypothetical protein MGC127695 EMBV3_15355 TGGATGTCCCCAAGGGAGAAAATTAGAATCAATGGATGATGTCGAAGAAAGAAGACTGGT Gene BVV0102_193921 + 0 NULL GK000003.2:8494617-8519512 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10138 AGGGACCATGGGGTGGAATGAGAGGACAAGTTAGTATAACAGACGGACCCAGAATTGGAC Gene BVV0102_134405 + 0 NULL GK000022.2:51569917-51572107 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129032 TCONS_00129040 TCONS_00129039 TCONS_00129038 TCONS_00129033 TCONS_00129037 TCONS_00129036 TCONS_00129034 TCONS_00129035 TCONS_00129041 1 XLOC_078005 Coding TCONS_00129032 XLOC_078005 Coding Coding ARIH2 22:51571084-51609931 j TSS96070 3930 1 TCONS_00129032_5 491 16 0.899243165319467 0.000249506568786788 0.000833846824651853 9.15895153933324e-05 0.00035200715919229 8.1833071223132e-35 4.19065386145055e-11 0.000218266758772021 8.63867015557395e-09 4.29379287445348e-05 7.23037618990589e-12 0.000589698017119459 4.06392318275613e-05 0.00110883784084925 7.20046789468731e-06 2.99731772945316e-05 0.00796840826216962 2.42512265618662e-08 0.003931705852066 0.00014325049295921 0.00143690499980101 5.48613206674539e-07 0.00376668088930786 0.00251686779151417 0.00289756549147424 4.95194243699597e-05 0.000250573302047051 0.000192106481344432 0.000638882721886206 0.000261866116540683 0.00155225183558995 XM_005222735.1 ARIH2 PREDICTED: Bos taurus ariadne homolog 2 (Drosophila) (ARIH2), 0.0 7081 100.00 0.998727735368957 NM_006321.2 ARIH2 Homo sapiens ariadne RBR E3 ubiquitin protein ligase 2 (ARIH2), 0.0 3608 80.39 0.988804071246819 TCONS_00129032_5 sp|O95376|ARI2_HUMAN ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2; 0.0 1002 97.97 0.9979633401222 1 coding 0 0 0 0 0.0113952058758971 0.9154864781652 -0.000751570800856027 0.989827272341382 CTCGCAGTGCCCCCCTCCCCGCGCGGTTTGTTAACGCCTGCCGATGGAAATTATATGAATGACTATTTAGGTGACATCTTCCTGCAAGATCTTCAAGAATTACAGAAGACAAAAACACTAATGAGTTTGAGAAAGTGGTGAAGTTTGGGGGGAGGGAAAAAAACTGCTTTCCTGATCTGCAACTTGACTGGATGTTAAGATGTCTGTGGACATGAATAGCCAGGGGTCTGACAGCAACGAAGAGGACTATGACCCAAATTGTGAGGAGGAGGAAGAGGACGAGGACCCTGGGGACATAGAGGACTATTACGTGGGAGTGGCCAGCGATGTGGAGCAGCAGGGGGCCGACTCCTTCGACCCTGAGGAGTACCAGTTCACGTGCTTGACCTACAAGGAGTCCGAGGGTGCCCTCAATGAGCACATGACCAGCTTAGCTTCTGTCCTAAAGGTATCTCATTCAGTCGCTAAACTTATATTAGTTAATTTCCACTGGCAAGTTGCCGAGATACTGGACAGATACAAGTCTAATTCTGCTCAGCTGCTCGTTGAGGCCCGAGTTCAGCCCAATCCATCAAAACATGTGCCCCCGGCCCACTCCCCTCACCACTGCGCAGTGTGCATGCAGTTTGTGCGGAAGGAAAACCTCCTCTCTCTGGCCTGTCAGCACCAGTTCTGCCGCAGCTGCTGGGAGCAGCACTGCTCCGTGCTCGTCAAGGACGGTGTGGGTGTGGGTGTCTCTTGCATGGCTCAGGATTGCCCACTTCGAACACCAGAGGACTTCGTGTTTCCATTGCTGCCCAATGAAGAACTGAGAGATAAATACAGGCGCTACCTCTTCAGGGACTATGTGGAGAGTCACTACCAGCTCCAGCTATGCCCTGGTGCAGACTGCCCCATGGTTATCCGGGTACAGGAGCCCAGAGCTCGCCGAGTACAGTGCAATCGGTGCAACGAGGTCTTCTGTTTCAAGTGTCGTCAGATGTATCACGCCCCCACAGACTGCGCCACAATCCGGAAATGGCTCACGAAGTGTGCAGACGACTCTGAAACAGCCAACTACATTAGTGCCCACACTAAAGACTGTCCCAAGTGCAACATCTGCATTGAGAAGAACGGCGGCTGCAATCACATGCAATGCTCCAAGTGTAAACACGACTTCTGCTGGATGTGTCTAGGAGATTGGAAGACCCACGGCAGCGAGTACTATGAGTGCAGCCGGTACAAGGAGAACCCCGACATCGTCAACCAGAGCCAGCAAGCCCAGGCCAGGGAGGCCCTCAAGAAGTACTTGTTCTACTTTGAGAGGTGGGAAAACCACAACAAGAGCTTGCAGCTGGAGGCACAGACATACCAGCGGATTCACGAGAAGATCCAGGAGAGGGTCATGAATAACCTGGGGACCTGGATCGACTGGCAGTACCTCCAGAACGCAGCCAAGCTCTTGGCCAAGTGTCGATACACCCTGCAGTACACGTATCCATACGCCTACTACATGGAGTCCGGGCCCAGGAAGAAGCTGTTTGAATACCAGCAGGCTCAGCTGGAGGCTGAGATCGAAAACCTGTCGTGGAAAGTGGAGCGGGCGGACAGCTATGACAGAGGGGACTTAGAGAACCAGATGCACATAGCAGAGCAGCGGAGGAGAACGCTGCTGAAGGACTTCCATGACACCTAGACTGGGACTCAGGCGTGCCGGCGTGAGGACGATGTGGCTGCGAGGTCTCTCGGCTGCCGTGCTGGATGCTGCAGGCTCCCTGCCTCTCACGACCCCAGGCAACAGCCAGGACCCCACTCCTGAGAGACACTGGCCACACACCTCTTAGTTGATTTCTGGTTGTTTTTTTTTTTCCCCTCCTCTTTTTGCTTTTTGTTTCCACCAGGGTAGAGGCCCCGTTGAATTGGCCTCTTCTCAGGACCGTCAGTTCCCCCTGGATAGTTGCTGGGAGGGAAGGAAAGTTTTTCTGAATGACTATTAATAGTATTAGATCATTACAACTTATGTAATTTTCAAAGGTTGTACAATTATACAAAAAAAAAAAAAACCGGGGGGCAAACAAACCATAGAATGACACAGAACCCTTTTTAAAAATAAACTGGCATTGGAGTGTTTTACCCTCTAGCTATTTTACTTAGAACGCAACATACGCTGTCCGCCCCCCTTGCCTCAGGATGTCTGCTGCACAAGGGCCCCGGTGGTACTTGCTTTCCAGATTCACACGCCTTTGGCCACAGCTGGAGCCCCAAGGCAACAGCATGGGCGGCAGATGGTGCAACATGGGGTTGGCCTGTGGAACACCGTGGTGTGCAGAGAATCACGCCCGGCCTCCTGCCTGGTCCTTGTAGACCCTTCTGTGATCAGGGTACTGCCTCACGTTGGCAGTTAGGAGACAATACAGAACAGAATCTTGCCCCCGGTATCATCATGTCCAGTGGCACTGCGTGTCTGTGGACTCATTTATCTTGAAAGTGAGCTTTACCTGGGCCTGGCCACTTAGGCCAGAGCCCACAGCAGAGCGCATAGGTGAGCTGTGGTCCTCCAGCCCAGGGGTTGGAGAGTTCAGCAGAGTTTTCTTTTGTTTCCTGAAGAGAGAGATCCACTTTCAAAGGGAATCATTCCCCCAAAGCCTTGTTTTACCTCGGCCCCTTCTTTTGTGCCAGTGTTCCCGTGGAGGGACCCCAACCAGGTTGACACACAGCTATACCTGATGCTGGCCTGCTGCGCTCTCCTCTGGTGAATGTCGAGGTCAGAGTTCAGCAGAGCCGTCCTAGGGCAATGGTCTGCCTGGCTCAGGGGCTGTGTCTGCACAAACTGTTTTCATGTTAACCGGGAGTGTGTGTCTCCATGACCTGCTCTGGGGGTGGGGTGTGCTCCCCCTCGCCTGGTTTCCAGTGTTGGAGGGCAACACCTCTGGGGTCTGGACTCTGAGGCTGGTGGGGGGCTTCCTAATTTGTTGTCCCCGCTCCTATACCTGGAGGCTGGCCAGGGAAAAGGCCAGTCTTTTCACAGTGCAAAGGAACAAGCGGTTTGCATGGTATCCTACTTGTCCTAAACCTGGTCCTGTGGGCCTTTCAGAAGTTAAATCTGTGATTCCTGGGGTTCCTGCGGCTCTTATTCAGGGCCTCCTTGACCTCCTGGAAGAGTTGCTTGGAAATCTGTGAATAAATATTGTGTTGGGAATTATTTGATATTCCAACATTTTCACCTCAGTCAGTAATTCCCCCAGGTACCATGTTAGTTGCAAACTGAATCGCTCTTGGAAGACAGAGGACAGTTGTAACTCTTGTGGTCATGGGGTCCATGGTTGGCTGCAGGCCCCCTTTCTCCCCAGTCATGTTTTGCCTCTTCCTGTCATCGCCTGCAAGGAAGGGACCATGGGGTGGAATGAGAGGACAAGTTAGTATAACAGACGGACCCAGAATTGGACAGCGCTGAGCCAAACGACGGAGGAGAGTGTCTACCTAGAGGTGGGATATGCCTGCTCTGTTGGCACATGGAAGGTCCTAGCGTCTGGAATGTTCGCCTGTCCGTTGAGTCCTCTGGTCACCGCCGTGGCAGCAGCAGGACCTGAGTTGCAGCTCTGCACCTTCAGCCCCACCCTGCGCACTGTCTGCACTGTGTGACTGCCACGCAGTGCACTTGCAGCCAGCTGTGACCCCCAGCCTCAGGAGCTGCGAGAGGGTCTGTGCCCAGACCGCAGCCTACAGCCTTTGACCTGTGGAGAACTTCCTTCCATGCCCCAAGTGGCTGTCTCTATCATCAGGAGCATGGAAAAGTTCAGGCAGAATGCTTCTGCCCTGCAAAGGAAGGCACAGTGTTTTCACAAATTTACCATATATCTTTGTTTTCTTCAAAGAAAAAGTTGAGGCAATGTCATCTGCTCAAAGTTGAGTGGTTTACTCAAAATAAAGTTTCTGATTATAAAAGTGCGT EMBV3_30406 CGGCGAGCATCATGTGTATTCCAGAGACACTTGCTTCAGGGACTTCTCAGGTGGAGCAAA Gene GeneID:506961|ADC:NM_001038510:70_cdna Constitutive 2 NULL GeneID:506961 2 GENE ADC MGC134604 arginine decarboxylase EMBV3_31086 TGTTGTGGTACTCCAGCAAGAGGAAATATGACACCCCCAAAACCAAGAGACTGAGTGGGG Gene GeneID:506530|SSR2:NM_001015533:94_cdna Constitutive 2 NULL GeneID:506530 3 GENE SSR2 NULL signal sequence receptor, beta (translocon-associated protein beta) EMBV3_25967 TGGGCTGCATAGCTGAGAGTAAGAATCTGGCCTGAATACCCTGAGCGCTATCTGAGCGAA Gene BVV0102_346700 + 0 NULL GK000007.2:33465945-33638729 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00165814 TCONS_00115686 TCONS_00252353 TCONS_00020158 TCONS_00224113 TCONS_00197928 TCONS_00231338 TCONS_00252235 TCONS_00250720 TCONS_00116100 TCONS_00010366 TCONS_00071860 TCONS_00220662 TCONS_00038381 TCONS_00222766 TCONS_00129573 TCONS_00209846 TCONS_00012329 TCONS_00230723 TCONS_00177370 TCONS_00230710 TCONS_00252107 TCONS_00008224 TCONS_00056146 TCONS_00249011 TCONS_00031939 TCONS_00107179 TCONS_00089345 TCONS_00070930 TCONS_00238306 TCONS_00039227 TCONS_00063181 TCONS_00018773 TCONS_00009259 TCONS_00111497 TCONS_00209636 TCONS_00222777 TCONS_00124585 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00064462 TCONS_00178325 TCONS_00233372 TCONS_00161667 TCONS_00012336 TCONS_00153218 TCONS_00010470 TCONS_00240534 TCONS_00122281 TCONS_00209032 TCONS_00140840 TCONS_00040744 TCONS_00012332 TCONS_00110323 TCONS_00085967 TCONS_00039904 TCONS_00109025 TCONS_00199802 TCONS_00109451 TCONS_00020756 TCONS_00238327 TCONS_00040740 TCONS_00179741 TCONS_00177996 TCONS_00088088 TCONS_00157613 TCONS_00117619 TCONS_00040502 TCONS_00135546 TCONS_00161835 TCONS_00059708 TCONS_00115148 TCONS_00177281 TCONS_00170823 TCONS_00116665 TCONS_00072814 TCONS_00142649 TCONS_00122313 TCONS_00249087 TCONS_00020023 TCONS_00011864 TCONS_00223554 TCONS_00251907 TCONS_00107832 TCONS_00199037 TCONS_00122686 TCONS_00166449 TCONS_00157036 TCONS_00031910 TCONS_00022066 TCONS_00152645 TCONS_00251929 94 XLOC_107421 XLOC_100654 XLOC_069855 XLOC_155294 XLOC_010836 XLOC_137409 XLOC_119588 XLOC_140827 XLOC_155176 XLOC_153663 XLOC_070269 XLOC_005917 XLOC_043630 XLOC_133979 XLOC_022206 XLOC_136073 XLOC_078286 XLOC_128357 XLOC_007841 XLOC_140213 XLOC_107144 XLOC_140200 XLOC_155048 XLOC_003782 XLOC_033949 XLOC_151954 XLOC_018184 XLOC_063090 XLOC_054130 XLOC_042707 XLOC_144973 XLOC_023045 XLOC_037908 XLOC_009455 XLOC_004815 XLOC_067397 XLOC_128147 XLOC_136084 XLOC_076129 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_039186 XLOC_108098 XLOC_142854 XLOC_098554 XLOC_092983 XLOC_006021 XLOC_147198 XLOC_073836 XLOC_127543 XLOC_085269 XLOC_024558 XLOC_066227 XLOC_052005 XLOC_023721 XLOC_064930 XLOC_121454 XLOC_065355 XLOC_011431 XLOC_144994 XLOC_024554 XLOC_109511 XLOC_107769 XLOC_052875 XLOC_096068 XLOC_071785 XLOC_024318 XLOC_081769 XLOC_098720 XLOC_036490 XLOC_069449 XLOC_107055 XLOC_103665 XLOC_070831 XLOC_044582 XLOC_087074 XLOC_073868 XLOC_152030 XLOC_010701 XLOC_007414 XLOC_136854 XLOC_154848 XLOC_063742 XLOC_120690 XLOC_074241 XLOC_101287 XLOC_095496 XLOC_018155 XLOC_012737 XLOC_092410 XLOC_154870 Coding TCONS_00209032 XLOC_127543 NonCoding NonCoding - 6:64152219-64153072 - TSS156539 853 5 TCONS_00209032_3 52 0.998827667057444 1 0 0.000107999636877353 1.19149476583088e-05 2.77977361639031e-05 7.42310905705153e-05 7.42958473863742e-05 8.29962906229326e-06 8.28814847992459e-06 2.14954933166912e-05 3.66837127035834e-05 3.34088975402152e-05 9.6624329663661e-06 5.30274005361289e-05 1.35671438855644e-05 9.77799863791822e-05 5.64380255512048e-05 0.000967589294690976 0.000241963569057791 0.00217517217184346 2.34687726319461e-05 2.10768795184397e-06 7.7643663881918e-06 0.00243679562207728 0.000415699164541666 0.000345529510950997 1.33440787334988e-05 7.22718768678785e-06 1.20285354067589e-05 0.000120696340149773 7.33536840209947e-05 0.000127428579407952 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 1e-29 134 83.87 0.144196951934349 0 noncoding 1 1 1 1 -0.0633622171091176 0.579861142912628 -0.0149585236604085 0.812391044970016 CGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTTGGTGAGCGCCAATGCTGCGACTTACCGCCTCGCTGCCACTCGGTTTTCTGGTTGTAACACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCCGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGCGATTGCCCCCTTCCGGCTCTGGCTGCCTGTCACCGGAGGGGGAAGGTCTGCAGCCGGCTATCTCTGTTCAGTCCTTTGTTCCGTGCGCGGGCCTGACGGTTTTAGGTTAGGACTGGCTTTTCGCGTGGTAGATATCCCACAGTCTGGTTTGCTAACCCAAATTATTTCGCTCAGATAGCGCTCAGGGTATTCAGGTCAGATTCTTACTCTCAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCTGCTTGCTAATGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGAAATCTGCGAGTTTTAATTGTTTATTTATTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTCGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGATTCCCTTCCCGGGACGGAGCTCCGTCCCTCCCTCTTTTGTCTCT TCONS_00205327 . 3' 333887 TCONS_00205327 . 3' 334739 EMBV3_05619 CTGAAGCAGCTCCGGAAGGCAGAGAAAGCTGAGCGGGAGTTTCGGAAGAAGTTCAAGTTT Gene GeneID:504848|PRAM1:XM_002688891:145_cdna Constitutive 0 NULL GeneID:504848 7 GENE PRAM1 NULL PML-RARA regulated adaptor molecule 1 EMBV3_01462 CCGGGTAAGGGCGGTCACTCATCACTTGGAAGATCTAAGGAGGCGACAGAGAATCATCAA Gene GeneID:618287|INCA1:XM_002695772:261_cdna Constitutive 0 NULL GeneID:618287 19 GENE INCA1 NULL inhibitor of CDK, cyclin A1 interacting protein 1 EMBV3_13089 TACAAGCCCAAGTATCTTCAGCTCAAGAAGGGAGAGCAAGTTTCTGAAGCTGGTGGCCGC Variant GeneID:523694|SEPW1:NM_001163225:274_cdna 369^502 2 EMBV3_41319 GeneID:523694 18 GENE SEPW1 MGC128106 selenoprotein W, 1 EMBV3_32322 CATCTGACTCGGTGGAACAGATACTGCACCTCCATGCTGCGTCACTTCTTGCCTCTCTTA Gene GeneID:517240|CC2D2A:XM_002688465:35_cdna Constitutive 0 NULL GeneID:517240 6 GENE CC2D2A NULL coiled-coil and C2 domain containing 2A EMBV3_04703 AGAGCATGCGGTTATTGGCCAGTGACTTGCAAGAAGCTCTCTAACCGTCTTGCTCAAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35050 GCTGCTTGGATGGACCCATTGTGCGTCTTTTACTGAAAACTGGCTCCCCATCATGTATCC Gene GeneID:526052|TPP2:NM_001099034:20_cdna Constitutive 0 NULL GeneID:526052 12 GENE TPP2 MGC157323 tripeptidyl peptidase II EMBV3_11694 TTGAGTCCTCGAGTTGATCGGGTCTCGCGGGCATCTTGTTTTGGTCTCGCGGGCGAGTGG Gene BVV0102_269494 - 1 EMBV3_24850 GK000025.2:36648340-36651005 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149416 1 XLOC_091292 NonCoding TCONS_00149416 XLOC_091292 NonCoding NonCoding - 25:36649088-36649673 - TSS111951 585 1 TCONS_00149416_1 60 1 0 0.000511668104218381 0.00106496134904193 0.000680208088388958 0.000511024522687185 0.000253188919752011 0.000324075062302752 0.000707780097669653 0.00131438172735149 0.00103853108566326 7.73665210453985e-05 9.78282546191555e-05 8.5572109370603e-05 0.00014223789502793 0.000739773596267028 0 4.51480182835246e-05 0 0 0.000723221241702844 0.000577772637562088 0.000176435769951479 0 0 0 0.000994857666998455 0.000915309536552216 0.00053082947327177 0 0 0 XM_005225118.1 MEPCE PREDICTED: Bos taurus methylphosphate capping enzyme (MEPCE), 0.0 1056 100.00 0.998290598290598 XM_005250498.1 MEPCE PREDICTED: Homo sapiens methylphosphate capping enzyme (MEPCE), 0.0 762 89.06 0.998290598290598 0 noncoding 0 0 0 0 -0.0234943747588109 0.868726015304174 0.0604124462844533 0.480816221761845 GACCACGCTCCCTTCCCCCCCTCCTTCCCCGAGTGCGCGCGCAGTGCTGCTCGTCTCCCCTGGTCTCGTGCCCAAGCGCCTCCCCGGAAAGCTCGCCCCACTCGCCCGCGAGACCAAAACAAGATGCCCGCGAGACCCGATCAACTCGAGGACTCAACCGCGCGTGCGCCGACCCCTTTCTCCTCCACCACTACCGCTCCGGCGCGAGCGCGCACGGCTGGGGCGCGTTCCTCTCTCCCGGGAATCACGCATGCGCACTCTGCCACCACCCTGATTGCGCGCGCATCGGAGTACGAACCAACTTAACGGCTCCGGGAGTTTAAATATAGCCCTTCTCAGCCCGCCCCCCACCCCCAGAAGCCCACCACCCCAAACTGACACCCTACTTCCCTTCGCAGCTATGTCCGTCCCTACTGATATCCTTTTGTCTCTGCCGCGCGATCCCACCCACCGTAGGCGGGGGACGGGGAGCTGGTGTGAAAAGGTCTCCTTGACACCCGACCCTTGTTCCTGAGGAATGAGTCTCAGCGGTCTCCGCCCGGCTCTAAACCCAGCAACCTCCCCACCCCGCCTCCTTCCTCCCCC TCONS_00147100 . 5' 69 TCONS_00147100 . 5' 69 EMBV3_07842 CCCCCCTCTCTAATTTACAGCAGATCCAACCATTTCTCCCTTGGAGACTTGCCTTTGGTA Gene GeneID:538778|DACT1:XM_002690959:328_cdna Constitutive 0 NULL GeneID:538778 10 GENE DACT1 NULL dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis) EMBV3_30442 TGGTGTGGAAGGAGGAGAAGGAGAAAGTGATCCAGTACCAGAAGCAGCTGCAGCAGAGCT Gene GeneID:539634|LZTS1:XM_002689758:5_cdna Constitutive 0 NULL GeneID:539634 8 GENE LZTS1 NULL leucine zipper, putative tumor suppressor 1 EMBV3_41065 TCGTGCAGGAGGATCAAAAGTGTGAGGCCTACTTACGCAACTTTTATAACCGCGCCATCC Gene GeneID:508646|GZMB:XM_002696646:216_cdna Constitutive 0 NULL GeneID:508646 21 GENE GZMB NULL granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) EMBV3_05832 TGACGGTGTAGAGGACCTTCGCTGCAAATACGTCTCAACTCCCGGCCCAAGCTCAAGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10160 GTCACCTCCAACAACATCCGCGAGATCGAGGGCAATGTATTTATGTATTATGGACTGTCT Variant GeneID:505797|TMEM30A:NM_001075223:8_cdna 340^447 1 EMBV3_07490 GeneID:505797 9 GENE TMEM30A MGC139932 transmembrane protein 30A EMBV3_33271 GACGCGCACAGGGACATCAAGTTCAGCATTGACTACATCCTCTCCGCCCCTGACCCCTTT Gene GeneID:783396|LOC783396:XM_002698174:674_cdna Constitutive 0 NULL GeneID:783396 25 GENE LOC783396 NULL similar to crocodile CG5069-PA EMBV3_27288 CATTCCTGTCGTGTGATTGGATCCTGGGCATTTACGTGTTCCTCAGTTTCCCTGCTTGTG Gene BVT0102_342003 + 0 NULL GK000001.2:41648573-41736550 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003106 1 XLOC_000794 NonCoding TCONS_00003106 XLOC_000794 NonCoding NonCoding - 1:41689860-41701330 - TSS1623 523 1 TCONS_00003106_1 43 3 0.954660388874357 0 0 5.30821301763388e-05 0 0 0 1.11504930470593e-05 0 0 0.000338285475167721 2.44719695741015e-15 4.7858177619011e-05 0.000109723895059911 2.69827313529201e-05 0 0 0 0 0 0.000302506668967849 0 5.67545873672425e-05 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.236285256875267 0.117028280908476 0.0187166343398259 0.801415890976106 ACAAGCAGGGAAACTGAGGAACACGTAAATGCCCAGGATCCAATCACACGACAGGAATGAATACTGATGGAAGCAGCTCAATCAGTTACAGTTCTGTTTCCTATCCAGTTTTCTTTGAAGCTCTCCAGGAAGCCTTTAACGACTGAAGTAAACACAGCTTTCAGGAGAGCGTCCTTCCAATCACGAGAGATCTTCTAGTGCAATGTGGGGGAAGAGGCAGCAATAAGCCTCTCTAGCCAGCAAAAGTTTTAAACAGCGAGTTGTATATCACTTAACCCCTCTTCCTCCCTCAGGACAGATGAAAAGACTCCGGAACAGTTTCCCAGGGCTGAAGAAGTTGCAGCTACCCCGTGGCCGTCTCAGAAGTTGAGGGCGCCATAAGTGCCGGTTCAGGTGAATGTACTGACATGCAACTTTCAGTTATCAAGTCTGGAAGACAATTAAATGGACCTTGTTTTTATCAACTTCATGGCTGGTTTTAAGTAACTCCAAAAATGATGATTCTCCTTCCACCTGGTTTAAT TCONS_00000395 r 5' 9887 TCONS_00000395 r 5' 379 EMBV3_34190 TTTTCCTAAAAGCCGGTCTCCATCTTAAGGCCTCAGACAAACAGCTGGTAGGCAGCACAC Gene GeneID:100295352|LOC100295352:XM_002686901:99_cdna Constitutive 0 NULL GeneID:100295352 4 GENE LOC100295352 NULL hypothetical protein LOC100295352 EMBV3_25018 AGGACTCGACTACCAATCCTGTCCAACATCAGGAGACTGCGAAAACAACCCTGTGGATTC Gene GeneID:616757|BST1:XM_002688466:38_cdna Constitutive 0 NULL GeneID:616757 6 GENE BST1 NULL bone marrow stromal cell antigen 1 EMBV3_13781 AGAAGCTGCACCTCTCGCTCAACGATGCCTACGATCTGGTCAAGAGGAAGAAGTCCAACA Gene GeneID:614306|DUSP9:XM_002699742:189_cdna Constitutive 0 NULL GeneID:614306 X GENE DUSP9 NULL dual specificity phosphatase 9 EMBV3_29525 GAACAAGCAGGCCCTACAGCCCTTACTAAACAGCAACCTCCAGCCTCTGGTACCTTAAAA Gene BVT0102_011170 - 1 EMBV3_36857 GK000012.2:78546609-79000722 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035729 TCONS_00035731 1 XLOC_020986 Coding TCONS_00035731 XLOC_020986 Coding Coding RAP2A 12:78507479-78549442 = TSS26150 5195 1 TCONS_00035731_2 183 2 0.876245174205233 0.000178952826688084 2.09817839213094e-05 0.000263845935921456 0.000547355454614231 0.00118222236421771 7.6228856463438e-05 0.000891981440795639 0.000916154198891615 0.00152251358965691 0.000297751461795322 6.84527147332996e-05 0.000176113650521637 0.000290942783448955 7.58556059670222e-07 0.000546491898477909 0.00236110234310761 0.00198275017946765 0.00120112875276212 0.000304470731775191 5.21521721006743e-05 0.000240637971846957 0.000553155375375495 0.000415410711990763 0.00088534777299296 0.000219547819156718 0.000739184529183421 1.88095853355206e-05 0.000173319155853514 0.000215274711093595 0.000303307898906272 XM_005213936.1 RAP2A PREDICTED: Bos taurus RAP2A, member of RAS oncogene family (RAP2A), 0.0 7460 98.80 0.816169393647738 NM_021033.6 RAP2A Homo sapiens RAP2A, member of RAS oncogene family (RAP2A), mRNA. 0.0 4388 82.36 0.838498556304139 TCONS_00035731_2 sp|Q80ZJ1|RAP2A_MOUSE RAP2A_MOUSE Ras-related protein Rap-2a; 3e-134 378 100.00 0.994535519125683 4 coding 1 0 1 1 -0.00953454433865695 0.948117333566986 0.0563747948752156 0.434180009931564 GGGCCGCCTTGCCACCTGGCTCGGCCCCTATGCCCAGGGCTGCGCTTGCCTCCGCCGGCGCCCGGGGGGCCGCGGCGGCCGTGAGGTGGGGGCGGCCGCGGGAGGCGGCGGGGCCGGCCGCCGGCGCAGGGTCCGGGCGTGCAGCAAGGCGGGCGTAGGTCTATGTCGCGGGCGGCGGCGGCGGCGGCGGCCGCGGAGGGACGATGCGCGAGTACAAAGTGGTGGTGCTGGGCTCGGGCGGGGTCGGCAAATCCGCCCTGACCGTGCAGTTCGTGACCGGCACCTTCATCGAGAAATACGACCCCACCATCGAGGACTTCTACCGCAAGGAGATCGAGGTGGACTCGTCGCCGTCGGTGCTGGAGATCCTGGACACGGCGGGCACCGAGCAGTTCGCGTCCATGCGGGACCTGTACATCAAGAACGGCCAGGGCTTCATCCTAGTCTACAGCCTCGTCAACCAGCAGAGCTTCCAGGACATCAAGCCCATGCGGGACCAGATCATCCGAGTAAAGCGGTATGAGAAAGTGCCGGTCATCTTGGTGGGGAACAAAGTAGACCTGGAAAGTGAGAGAGAGGTGTCCTCCAATGAAGGCCGGGCCCTCGCCGAGGAATGGGGCTGCCCTTTCATGGAGACATCGGCCAAGAGTAAAACCATGGTGGACGAACTCTTCGCCGAAATCGTGAGGCAGATGAACTATGCCGCACAGCCCGACAAGGACGACCCGTGCTGTTCCGCGTGTAACATACAATAGCACTGACATGTGGCTGCCCGCCCCCCACCATTGGAGGCGACACCAGCCTCTCCTGCTCGACCATGGAGCCTGCAGGGTGTGCGGTGTGAACCTCCAGGGAAGCAGCAGATTGTCCTTCAGAGCCAAGCGGCGATTGTCAGCTGATATCTCTGAGTCACCTTTGGGTCCAGTTACTGCAGTCTTCACCATCGTCCTCAGTCCCCTCCAGGCACCTGCAACTTCAGGCGTCGTGGCCCAGTTGATCCACAGGGCGACCTCCTTCGAAAGCTATGATGGCATTGTCACTTGAGTTGACAGAAGCAACTATGGTCAACGTTAAAAGTAATCACGGGACAGAAACCGGAAGAATTCCTGTGACCGCTTAACCATTAAAATATTTTGTCTTCTTTAAAAAAAATAGATGAGTCAAGGAGAAATATTTTCCTACCAGAGTACTGAATTTCAGGAACTGAGATAGTGCTTCTAACCAATGTATCACATCAAGGAAGTAATAGCAGCTGACCTGCCGACAGCATTCCAGGGAGAGATTCTTTGCTCAGCTGACACACTTCTGTTTTTCAAAGTTGATGCTTAATTGTAGATGTTATCCTAATTTGTGACACAGAACTAACTCACGCACCAGTCTCTGATAGAGCCAGAGTCAGCACAGGTTGGGTGAAAATACAGCCTGATGTTAGAATGTCATCACCTGCTTTGCCCAGAAAGTGGAGACTCTCACAAGGGTTTGAGTCAAATTAAAACCCCAGACCCACCCCTCTGTTCACCAAGCAGGGATGGTCTTTGTTACTTTACTGAACAAGAAGGAAGCAACTGTGATGGAAAAAGATTGCCTAGCCTTACTAACGAGAAGCATTCCAGTAGATGAACTAGTACCATCGTGTAAGGAAAATGAAGCCATGTTGCATCCACATGTTCCCGTTTGCAGAAACCTCGCAGGACAGTACCGATATCTTGCATTTTTATGTTCGTTAAAGCAGCAAATTCCTTCTTGCCTTTAAGGGCTATGGTTGTGGTGTGATTCTTGGCTAACCTGCTTTCAAAATCAAGTTTTCTATAGCAGAGCTTTATTGCAGGCATTAAAAAAAAATTTGAATAACCATGTGAAATAATTGGGGCTTAAAAGTAGAACAGAAATTATAGAGTGGAAAGTAAGAGACAAAAAAAAACCCTTTAATTTTCCTGGAAAATTCTATGAAGATTTTCTTACAACAATTTTGGCCTGATTACTGAAGTGGCAAATAAAGCTAGAGTGAATATTTTGTCTTGAAAAGGTGCTCAAGCCCTGACATTTTTGGTTTTTATAGCCGCCAAGTATTTATCATTTGCATGACTAATGGCACAGGAAAAACGTATTCATAAGTTTTACAATCAAGCGCAGAAGGGTTTTCAACCACCTTCAGAGTTATAAAATGCCGAAGAGAGTGTTTTGAGCTGATCCTCTGGAGATGAATTTGGCCTTCAGAACTGCAGTATCACTGAGCCTGTGATCTGCATACCGCCTCAAATTTCTTGTCGGTTTCACACTCTTGTGCAAGTCACCTTGGGTCTTACGTGTGTTACTGAGTGAGAATGTGTGTTTGCGTGTGCACGTGCGTTAATGTTCTGAAGAATTTGGCACAAGTCAGAGATAGTTGCCTATACTGAGAATCTGTCCTGCAGAATACCATGGAGCAAAAACATTTTTTTTGTCTTTTTTTTTTTTTTTTTAATACATTCTTGAAATCATTGCTAGCCCTCCCCCCAAGTGTTTAGTAAACTGATGTTAATGTTGGAGGAGAGAAAAAAGGTGGATAGTACTTTTCATAAATGAGAAGACAGATGTGTGGGTCAAACCAGGCATGGTTGTCAAAAGTCTTTGAATTGTGAATATTTGCATTCTTCAATATAATTTTTTGAATAATTTCCAATTATGAAGCACCTTTTATAGGCCAGAAAGTTCTAACCAGTTTTACTGCATCAAATTTGGTCATGTAAAAGGTGATTTGACTCAATCATGTAGACAAGTCAGTGATTCAAGAAGTATGATTTTTATCAACTGAAAGAGAAATATTTGTTAGTGCACTGTTTGAGTTTTGAAGCCTCTGACTTCTCAGAATGATTCTGGTTTTTAGAATTCCATATTTAGTAGAAATTTATGGCAAGTAAGATTACATATAAAAAATCTATAAAGACTTTACGGTTTTACATTGTGGATTGCTATGCAGACAAAAATAAGTTAAATAATGTGAAAGGTATGGCAGGATATAAGGTGGAAACGATTATCTAAATATTTGGGTTTTAGTTAGATGTGTTTATGTCAGACAATAAGGTGGTTGTTTTTATTTTTACTGTAAAGATGTTAATAACTGATATGGCTGCCTGATCAGTGTTTCCACCCAGCCCTGCGTATTTAGTGACAAAGCATCAAATATATCCAGAAACTTGGAAACCCTCGTGTGCTCTTACTGTTGGTGTTTCATCTGGTATGAAAATAACTCAGCTTGAATGAATGTGTTTGTTGAGATGTTAATACAGAGCTTAAGAACAGGAAGATGAAATTTGTTGGCACATGATTAATAGTTGGTGACCTTGTGTCGCTATTTATTTTATGCCCTGATCAGAATAGCAACTAGATAAGTGAAAGTTTTTCTAACATGCCTTAAAAATGTTATGGTTTGATCCAAAGACCCACTTTTTCTTTAGCTACTACGATAAGGTTTTCTTCTTTTTTTTTTCCTTTGTTTTGTCTTGTTTTACTTTTATACAAAAGCAGCATTTTTTTTTTGTAAGATTTTTTGTTCTGTGTCGCAACTTTTTTGTTGTTTTTTGGTTCTCTTAAGCTGTGATAGTGATGGTAACTGATGCCTTTCTTTTTGTTCAACTCATACAAAACAAGCCAGCATCTGATCAAAAGTATTACATAAAATCTTCCTTAAACTATGGAAAGGTGCTTTGATGATTTTTCTTCTTTGGTTTGTAGAATTAGGACTGAACTTTTGACTCTAATCACTACAGTTGCCATCACTTTTCTGTGGTCAAACTACTGATATTTGCTTTTCTATATAAAGAAATGTTGCCTGAGGATGTCTGCTGCTTGTTTTCAGGAGTCGTCCAGTAGGAATATTGTCTATGTGTATGAATATGAAAGTGCTTATTTCGCTTGTTGCCATTGGGTTTTTGTTTGTTTGTTTTGTGGTTTTTTGTTCTTCTCGGTAGTCCTGTGTTAGCACTTGGGTAAGCTTTAATGGTCTCCTTAGCCAATCCAATGTTAAAGACTATGGGGTCTTTTTTTTTTTTTTGATTAACGTGTCTGTCATTGTGCATCTCTTAAATCTTGATCAGGGTTTCAAGAATGACTGCAGTGGGTTTTGGAAACAGACTTATCCTTATTGATTTGGGGTTTCCCAGAGATAAATATAGTTCACAGTTAATTGTTGAGCTCTAATACAACTGACCATTTAAAATTGAACAACAGTTTATTGTTTTGTAACAGTGTCAGTTGTTAAACCTTGACCTTTCAGTTAAAACATGAATTGTAGTTATAACTCAATGCAAATTCAACAGTTGTATTTGGAGTTAAATTATTTTAACAAATAAATTTATTTAATGAAATTGCCTCTGGATTTTTTCTTGTTGTTTTATATGTATTCATGGGTGAAATGTATTTTTTCAAAAACTAAAAATTGCTGTAGAATTCTGTTTACAGAAATGGTCAAGCTGAGAATTCATCATATTAAAAAGGTTAGTAGATCATTTTCATAGCTTTTAAAAATAAAAACATGAGAAAGATTTTTAAATTAGTAAGTTTAGATATGAACAGTACTTTATATTTTTGATGATAGCTGGCTAATTTGAAATCTCAACGGTATTCACGTTCACAGAATTGTTCTAGATAATTAACATTAATTAGCAGTTGCTTTGTGGCCCTGCTGGTATCACAGAAATGTATCTGTGTCCTTCCACTGATGGCTTGGGGGTGTCTCTTTGTTTAGGTCTTGTGGATTTTTAAGGTACCAGAGGCTGGAGGTTGCTGTTTAGTAAGGGCTGTAGGGCCTGCTTGTTCTATATAGGGCCCTGTGAATGTTGACAGATGCTGTTAATTATATACAGCCTTCAGCTGCTCTGATAAGGAGCCCATTCATTCCCTAAGCCAATTTAAACTGTGCCTTTTGGTCATGTTGCCTTCAAACTGTGTTGAAATTTCCTGGCAACATTCCACCAGTTTAGAAGCCTCATTGTTTTGGAATAGAATAATTTGAATGAATATAACAGAGGCACTGTAGGCAGAATCTCAAATATTTAAAGGAAAATGTGTCTATATTTTAGTATAATAAACAAGTATCTACTGGTTGGCCTCATAATCTCATTTGAAGCCTTTGTAAAGTATTCAAGCCTATCACATTCTGCTTCCAATTGGGAGAATTTCTTTGTGAGTGGAAAATAAAATTTTGAAATTCTAAC EMBV3_12429 ACTGGAGCACTCCCATGACCCATACAACGTGTACATTGAGTCCGACACTTGGCAGGAGCA Gene GeneID:528014|KCNE1:NM_001077977:40_cdna Constitutive 0 NULL GeneID:528014 1 GENE KCNE1 NULL potassium voltage-gated channel, Isk-related family, member 1 EMBV3_04726 TACCTGGTTGTGTATTTCAGAGTGTGGAGCTGTGGGAAGGTGTGACCAAGGTGAGCGCTA Gene BVT0102_239311 - 1 EMBV3_42066 GK000009.2:32928632-33014531 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236948 TCONS_00236947 TCONS_00236949 1 XLOC_144614 Coding TCONS_00236949 XLOC_144614 Coding Coding SLC35F1 9:33011436-33437306 j TSS177263 4342 1 TCONS_00236949_2 405 8 0.989823161582552 9.41936466741987e-05 0.00038094579256758 0.000196940723857406 0.000501986235596889 0.000223755649542519 0.000372905854649041 0.000206782850610935 5.72440814546831e-09 1.39305227139234e-22 6.99040565979229e-05 8.60252858338526e-14 1.23477259131748e-05 5.01487507183831e-15 1.28013083738533e-11 1.64946000948534e-05 0.000301932532872795 0.000156738248829316 0.000139815390393192 0.000184145775317555 0.000703099545423695 0.000256424794075496 1.91251278590567e-13 4.30488322019895e-14 0.000242575445620195 0.000832908771678534 0.00078643796512629 0.000315590399152267 1.7986215249891e-13 1.71591591979131e-12 2.7692054468496e-05 XM_002690083.3 SLC35F1 PREDICTED: Bos taurus solute carrier family 35, member F1 (SLC35F1), transcript variant X1, mRNA. 0.0 7478 100.00 0.954629203132197 NM_001029858.3 SLC35F1 Homo sapiens solute carrier family 35, member F1 (SLC35F1), mRNA. 0.0 2928 86.49 0.559880239520958 TCONS_00236949_2 sp|Q8BGK5|S35F1_MOUSE S35F1_MOUSE Solute carrier family 35 member F1; 0.0 765 96.91 0.955555555555556 2 coding 0 0 1 1 0.0832826243822858 0.485620700822161 0.00995223132012057 0.848998658373242 ATCGCCGCCGCGCCGCCGCCTCCGCCGCGATGATCCCCCCCGAGCCGCAGCCGCACCAGCCGCCGCCGCCGGCCCCGCCGAACCATGTGGTGACCACCATCGAGAACCTGCCGGCCGAGGGCAGCGGCGGCGGAAGCCTGTCCGCCTCCTCCCGGGCCGGCGTGCGCCAGAGGATCCGCAAAGTGCTGAACAGGGAGATGTTAATCTCTGTGGCTCTAGGCCAGGTGTTATCCCTCCTTATTTGTGGAATTAGCTTGACCAGCAAGTACCTGTCAGAAGATTTCCATGCCAATACGCCAGTCTTCCAGAGTTTCCTCAATTACATTCTTCTCTTCTTGGTCTATACCACCACACTAGCTGTCAGACAAGGAGAAGAAAACCTCCTGGCGATTTTACGGCGAAGATGGTGGAAATACATGATCCTGGGGTTGATAGACTTGGAAGCAAACTATCTGGTGGTCAAGGCTTACCAGTACACGACTCTGACCAGTATCCAGCTCCTGGACTGCTTTGTGATCCCAGTGGTGATCTTGCTCTCCTGGTTCTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCATCGGCATCGTTGTCTGCATCCTGGGGATGGGCTGCATGGCGGGCGCGGACGTGCTCGTGGGCAGGCACCAGGGAGCAGGGGAAAATAAGCTGGTGGGGGATCTCCTGGTCTTAGGAGGAGCCACACTGTATGGTATCTCTAACGTCTGGGAAGAATACATCATCCGAACTCTGAGCCGAGTGGAATTCCTGGGAATGATTGGACTGTTCGGGGCATTTTTCAGTGGAATTCAGTTAGCGATAATGGAGCACAAGGAGCTGTTGAAGGTGCCCTGGGACTGGCAAATAGGACTGCTCTACGTCGGCTTTAGTGCCTGCATGTTTGGTCTCTACAGCTTCATGCCCGTGGTCATAAAGAAAACCAGCGCCACGTCGGTCAACCTCTCGTTGCTCACCGCAGATCTGTACAGCTTGTTCTGCGGGTTGTTTCTCTTCCATTACAAGTTTTCAGGACTGTATCTCCTGTCTTTCTTCACCATCCTCCTCGGGCTGGTGCTCTACTCGTCCACCTCCACGTACATAGCCCAGGACCCCCGGGTTTACAAGCAGTTCCGCAACCCTTCGGGACCCGTCGTGGACTTACCAGCCACAGCTCAGGTGGAGCCTTCGGTCACCTACACCAGCCTGGGCCAGGAGACCGAAGATGAGCCCCACGTGCGTGTGGCCTAGGATGACACCCTCCCTGACCACTGAGGACACCTCCACGGCTGTGTGTCCGCCCGTCATCTCTGTTTTGTACATAGAGAAAGGTATTTATTAGGTGCAGTTTACAGAGGTGGACTGCAAGGTAGCAAATCCGAAAGCCTGTAAGAGGCACACGCTAAACATCCCTGGAGATGCAGGCTCTGATCCACCTGGAGGGATGCCTACCTAGGGTGTATCCTGGTCACACACACACATACACCACCACCCCCCATCCACATTAATTACTGTGAAAATGTTTGAATCAAAAGCAAGTATTACTGTTTGTATGATTATGGTTACTGTTATGATAGCGACTTTCAGGAGGAGGTTTTGTACTCCTGATGGGAACTCTCGCCAGACCCACATGTAGTTAGCATCACTCCCACTTTTCTATGGCAAGTCACTTTTTAAGAATCACACTTTATTTTTGTGCACCTTCTCTGAGTGCTGCATGCCACAGGAGCCCCACCCTGCGACGCTTCCTTATCCTAGGCACCTGGGGGCTCATGGTTCCCTCTGTTACCTGTTGGATCGCCTGCTCAATATGTATTTCGTGCTGTGACCCTTGTGGGGAGTGGCAACTGACCATATAATTCTCTATTCTAGGAATAGATATAAAACAAACATTTTAGCCTTTTTATATTTCAACCTCGGATTACTCCAGGCCATTGCCTTTCTGTTGCAACTCATGATTCTGCTAATCAAGTCCTTGTAATAACAGGATAAGGAATGTTCCATTTCTGTGGCTTATGGGAAACCCCAGAGTAATATCACTTGTGCTTAGGGTACTGTCTTTTTTAAAAAAATCTTTCTGCCCCTTCCTATGTTCCCTCTTCCAAAAAAAAATTTAATTTTCCTTTTCCCCCTAGATTTCTTTAGGGTAGATCAATATGGAGATCAATCAAGGCATTGGAAAAAGCCATGGTCCTCTGCCCTTTTGTGTGACACCCTTTTTGAAATATACCGGCATGGAAATTATCTTGATTGTGGGATATCATTGGTTGTCTGGCCTCCCAACAAAGTCAGGGTGCTGCTGTGGCACAGCCTCTGACAACAGCTCATCTGATATGGCCATTGTGTAGTAGTAAAAATCTCACCAATGAAAAGTCTGGCATTTTTGGTCATATTTGGCATCCATTCGATAACAGAATGTATCAACACAGCATTCTTATGGATACAGAGAATATTCCAGGGTCCTGATAGGGCTTTGAGGGGTATGTCACTAATCTAATTTTGTCGCCTTTACAATAGCTCTTTCTTCAAACGCAGAAAATCAAGAAACACCACAGAGCTCTGTGATTTACAGTAGATTCTCTTTTTCCCTATCAGTACATGCACTAGTCTTTACGTTTGGCTGGCTTCAGTATCATTCAGAAAGATCCTCGACAGAGTTACAGGATTTGTAAAGGAAAAACAAGTGTTTATGAAACTTTGGGCAATTCAAACCAGTTCAAGTTAAGTAAGCAAAGCAAAACTCCAGTGGGGTCTCTGTAAGGTGGAGAACAGATTGCAGCTTAGTCAGGATTCCCATACTGGCCTGAACAAGTCCTAAATAGACCTGCAAAAGTGTCCCATGCTGTCAGTCAGCACCCACGTGGCACCTCTGTCTGCCCTCTACCCTGGGGACAGGGAGTCCTGCCTTGGAGTTGGAGCAGACAAGTTATCTTTCCTGATATGCAAATTGTATGCTCATCTCCATTCAGCCCGCTTAGAAGCCTGTTTTATTTCTAGTGAAAAAAATCAACACTAAAGCTGTATCAAATCAAAAGAACTTTGCCAATGTTTGCTCTCTGCTACCTGTCAAACCAATTAAATACCTTTCTCTGACTATTTTGTCCATTCAGATCTGAAGACCTTTAAAGACTGGTTTTATTTTTGTGTTTATGTTCCTTTGGTTTGCATAATTTGTCTGATTTATTGCATTTTTAGTATTTATTTTCAGCCAAATATTTTCATCTTTTTTTGTTCATTTTTATGACACTAATTTGTAGACGCTTAGTAAAATCTTAAGAAAAATAAGTGGATGAAAGTATTTCCAAGTCAACTCAGTGGATGCAAATTTTTTTTTTTAATTTCTAAAAGGTTTGCAATCAATGGATGGCTACAGGTTGCCATGTGAATCGTTTCCTAGGATATTTTAACTGACTCCAAATTGTATGGAAACCAAGTGTGAATGTTAAGGTGAATTCACTGTATACCTTTTATCATCCCATGTCCTTGTACACAAGACTTTCGTGTCACTGGGGTGCCTCACCGTGTTGGTTCTTCTCCATTTAGAAAGGCTGATAACATATTCGAATTGTCTGAGATTCATCCCATGAATCAGGAGTTCCAGATTGGCCTTTTGGGGAAAAAAAGACAATAGCAAGAAACAAACTCTTTTTCTGTGTTAAGACATCAACCCTTTGGGAATGGGGTAGGAAATGGGAGTAGGACGTCATTAACTCTAACTGTTTGAGTTTCTGGAATTTCATAACCTCAGTAGACACCAGCAAGAATTTCAGCTTTTCAATCTACCATAACTCTCTCTTCCACAAATAAGACTTTAGCAATTTGTATAGAATTTGGCTGGGTAAGCAAACCATAGCTCTCCTAAGTCTCGCTCGAGATAAGTGGTGGTCCTCACTTACTCCATGACAACTTGCACTGGGGCTAGCGCTCACCTTGGTCACACCTTCCCACAGCTCCACACTCTGAAATACACAACCAGGTAGACCAAGCAAAGGAAAAATTGGTACCACTGTGTCCCATGAAAATGTTTCAATGTTTAGTTTAGATATTGCTAACTTGTGCTATTAACCTTTTGACAAGCGTGTAGTATTGTTCGTTTGGGGTTTGTTTTTGATTTGTAACCACTTAGTAGTCCCCAGCTAGCTACCAGTACAGATTTTTACCCCATGGGTAGGATTCTACTGTCAAGCCACATAAATAACAAAGCACACTAATCCCAACACTGCAAATGGAAAATATGAACCAAAAAGGGAAATTGACACCAATAAGTTGAACAAACTCTCCATTTTTGATATTTGCATGCTCCCCTATGGACTGGCTGTGGCAATGTAATGCCTGTATAATGTTTT EMBV3_27901 AGGAGTTTGAAAAGCATGGTGCAGTGGTGAATGAAAGTCATCATGATGTTTTGGTAGAGG Gene GeneID:615718|FKBP14:XM_002686841:48_cdna Constitutive 0 NULL GeneID:615718 4 GENE FKBP14 NULL FK506 binding protein 14, 22 kDa EMBV3_09499 CTTCACTGGTCAAACGGGACAGTTCAACCCCAAATTGTCGAGAGGACAGCTCTGGATCAT Gene BVT0102_004304 - 1 EMBV3_04520 GK000002.2:121076440-121176034 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103598 1 XLOC_062161 Coding TCONS_00103598 XLOC_062161 Coding Coding LOC100847876 2:121089839-121145133 = TSS76908 1488 1 TCONS_00103598_3 495 13 0.973323928887924 0.000259736658772696 0.000783345620074744 0.000194333998717257 4.46460413510438e-05 3.61982903791562e-06 4.80787352147221e-06 2.35149927690307e-05 1.58998449869601e-05 0.000250267488252317 0.000237800335717127 0.000100501777253361 0 2.22889202279792e-05 1.05595274496621e-05 2.88080527568479e-05 0.00166847116313467 3.34723736109582e-05 0.000691350802850496 0.000248098564600559 0.000327640057215982 0.000113620333458554 0.000558544946541092 0.000659693152730291 0.000574594616486121 0.000353874441322761 0.000438388782225875 0.000295005159114539 0.000258203835655803 0.000107662720077812 0.00029495565827361 XM_005203047.1 LOC100847876 PREDICTED: Bos taurus unconventional myosin-IXa-like (LOC100847876), transcript variant X2, mRNA. 0.0 1552 100.00 0.577284946236559 NM_006901.3 MYO9A Homo sapiens myosin IXA (MYO9A), mRNA. 0.0 1342 94.64 0.576612903225806 TCONS_00103598_3 sp|B2RTY4|MYO9A_HUMAN MYO9A_HUMAN Unconventional myosin-IXa; 0.0 598 99.30 0.575757575757576 2 coding 0 0 0 0 -0.00754721868231867 0.95627766528693 -7.5949414208798e-05 0.998706395923593 ATGGCCACCGGTTCAGGCCCGGAGCATCACCTAGGCGTGTTCACCCAATCCCCGCCTCTCCACAGTGCCAATTGGCTGGAGAGGCCACGCCTTGGCCGAGTAGCCAGCAGGGTGCGCGGCGCCGAGCCGAGGGGGCGGGCTGAGGGGCGGCCCCCGGGAAAGAGCAGCCAGGTGGAGGAGGAGCGCGAACGCGACCGCAGGCCGGGCCGGGCCGGGCTGCGCTGGGCGGGGCATTGCCGTGGGCACCGGCAGGCAGGCGGCGGCGGCCTGACCTGGGATCCGCGCCGTGGGGCCCGCGTGGGGGCCGAGCAACCGGGCGAGCGGATCGACCGGCCGCCGCACGCCCTGGGGGTAGAAGAGCACAATGGTCACATCTTTAAGGCCACCCAGTATAGCATCCCTACCTACTGTGAATACTGTTCTTCTTTGATATGGATCATGGACCGAGCCTCTGTTTGCAAATTGTGCAAGTATGCTTGTCATAAGAAGTGCTGTCTGAAAACCACAGCCAAGTGTTCTAAAAAGTATGATCCAGAGCTGTCCTCTCGACAATTTGGGGTTGAACTGTCCCGTTTGACCAGTGAAGACCGAACTGTTCCTTTGGTGGTGGAAAAGCTCATAAACTACATTGAAATGCATGGACTGTACACAGAAGGTATTTACCGAAAGTCTGGTTCAACTAATAAAATCAAGGAGCTTCGACAAGGTCTAGATACAGATGCTGAGAATGTAAACCTTGATGACTATAACATACATGTCATTGCAAGTGTATTCAAACAATGGCTTCGTGATTTACCCAATCCACTCATGACCTTTGAACTCTATGAGGAATTTCTTCGAGCTATGGGCCTTCAGGAGAGGAAAGAGACAATCCGCGGTGTATACTCTGTCATTGACCAGCTCTCCCGAACTCATCTCAATACACTGGAACGCCTCATCTTTCATCTGGTCAGGATTGCTCTACAGGAAGACACTAATCGAATGTCTGCTAATGCTTTGGCCATTGTGTTTGCACCCTGCATTCTCCGCTGCCCTGACACCATCGACCCACTGCAAAGTGTGCAGGACATCAGTAAGACTACCACCTGTGTGGAGCTGATTGTTGTGGAACAAATGAATAAATATAAGGCTCGTCTCAAAGACATTAGTAGCCTGGAATTTGCTGAAAATAAAGCAAAGACCAGGCTATCACTGATTCGTAGATCAATGAACTCTTCTAATGGCGACAGTGGTGGTAGCGTCTGTAAGGTGGCCCTCATGACGCTTGTTGCCTTAGTGTCCGAAGCACTTTCTGAGTTCGAAGGGCAGGAGCGTGCAGAGGTGATCACGGAGCCCATAGTGGATGTATCTCAAGGCAACGTCAAAACCACCACCACCGAAACCGCTGCAAGGAAAGAAGCAGCGCGTGTGCCGCAGGAGGCCCTGCTGGGCTTGGACCAGTCTCGGGGTCAGAGGACGAAGCCTTGTCTGGGCTCTGCCCTGGGCTGA EMBV3_11673 TACCGTTTTACATTCTCACCAGCAGTGTATGATATCCACTTGTTCCACATCCTCTCTGGC Gene BVV0102_353271 + 0 NULL GK000018.2:58183084-58194881 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084432 TCONS_00084431 TCONS_00084438 TCONS_00084436 TCONS_00084434 TCONS_00084433 TCONS_00084435 1 XLOC_051563 Coding TCONS_00084433 XLOC_051563 Coding Coding ZNF614 18:58163106-58185693 j TSS63244 3809 1 TCONS_00084433_4 352 0.371226043580992 6 0.831621358363588 2.86014126407002e-16 0.000448297542875799 1.3772911027197e-13 0.000150391993073699 1.97886515823858e-15 1.55803629145535e-16 4.25511820543035e-07 0.000164276565249755 2.01452868167265e-08 0.00056494389845151 1.11198158072278e-08 4.98750989634388e-05 2.31458685805301e-06 5.11003587060169e-11 6.67753440825691e-25 6.43095677709308e-18 0.000876420335134569 0.0135853323804497 5.30462792809198e-36 0.00016882209857887 3.22003868753923e-75 0.00150747564212617 0.00315332858540786 0.00177457729192984 2.16612791183577e-05 1.90178645494745e-12 2.1684913560355e-39 8.07034576909728e-09 1.96789364693272e-16 1.88276259970934e-15 XM_001789843.4 ZNF614 PREDICTED: Bos taurus zinc finger protein 614 (ZNF614), mRNA. 0.0 4827 98.84 0.723286951955894 NM_025040.3 ZNF614 Homo sapiens zinc finger protein 614 (ZNF614), mRNA. 0.0 870 75.64 0.327382515095826 TCONS_00084433_4 sp|Q8N883|ZN614_HUMAN ZN614_HUMAN Zinc finger protein 614; 4e-117 355 52.14 0.974431818181818 4 coding 0 0 0 0 -0.225278306984056 0.480050763961549 -0.0624631068830025 0.283665337851598 CGGCAGCGCTCCAAGGTCGTCGGCTGATAACCTGAACCAGCAGGAATTGCTGACACTGGAAGATGTGGCTGTGGAGTTCAACTGGGAGGAGTGGCAGCTCCTGGATTCTGCTCAGAGAGACCTATACTGGGATGTGATGTTGGAGAACTATAACAATTTGGTGTCACTGGGATATCAAGGTACCAAACCAGATATGCTTTCCAAGTTGGAACATGGAAGAGAACCATGCATAATAGAAAATGAAATGCGGAATAGAATTTGTCCAGGAATCCGGAAAGGTGACAGTTATTTGCCAGAGCACTCTCGAAACCAAAGATTTCTGAAGAGCATGCAACAGTGCAATGAACAGAATGCATTTAGAAAGAGTGTTCATCTGAGCAAAACACATTTCACCCTAATTCAAGATCATATATTTAACTTACATAGAAAAGCTTTGGAATCAAGCTTAAGTTTAATTAACCAGAAGAGCAGCTATGGAATAAAGAACCCTGTGGAGTTTAATGGAGATGAGAAATCCTTTCTACATAGTGATTGTGGACAGTTGTATTCTGGAATTATATTTCCTGAAAGTACAGAACACATTAGTGCTCAATTCCAATTCCTTAAGCATCAGAGGACTCACAAAATAGAGAAATCTCTAGCCTGTGTTGAAAGTGAGAAGCCATGCAGCAGGAAATCTCAGCTTATTTCTCATGAGAGTGTTCATACTGGAGAGAAACCCAGTGGGGGTAATCCATGTGAGAAATCCTTCTCCAGAAATGTCACATTAACTAAACATCAGAAAACTCACACAGGAGAGAAAGCCTATGAGTGCAATGAGTGTGGTAAAGCCTTCAGTCAGAAGATATGCCTCATACAACATGAGAGGTGTCACACGGGAAAGACTCCCTTTGTATGTACTGAGTGTGGAAAATCCTATTCCCACAAGTATGGTCTCATTACCCATCAGAGAATTCACATAGGAGAGAAACCCTATGAGTGTGATGAATGTGGAAAAGCCTTCACCACAAAGTCAGTACTCAATGTCCATCAAAGGACTCACACAGGAGAGAGACCATATGGGTGCAGTGATTGTGAGAAAGCCTTCTCCCACTTGTCAAATCTTGTGAAACATAAGAAAATGCACATCAGAGAAATGGGTAGATCCAGTCAAGTTGGAAATGCCTTTAACAGAGTCCCAGATCATTTTTTATGAGTGAACCAAAGCCCCGTTAATGCAATGATTGGGGAAATGCCTTCTGTGACAGCTAAGACTTTAAGCATCAGTGCTTCTAGCAGAGCAGAATGTAGTCATGGGATGACCTGTTGTTATCAGATGGGGGACCATGAGGAGATGAAAGGGTTTGCCCCAGAGATAAATCCAGTGAATATCGTGAATGCAATAGTGCCTTAATGATCCTACCTCACATTTTCTGTTAGTGAAAACATGTTGGAAAAGCCCTTGATACGTTCAGGGTGGAGATGCCTTGGGAAAAACTTTCTGGCTTCATTATATGTCTGAAAAGTATATATTCCGTATACACTTGGACAAATTTTGTGAATGCAGAGACTAGAAAAGTCATCAGTGGGAAGATAGACTTTATTATCAGGGATTGTTGTTGATCATCAGTGAACTCATTGTAGAAGTATGATTTAGAAAAGAAAAAAGAAATACGATGACCATGGGAATGTCTTTACCCAGAAAGAAGACCTCAGTGAGTGTCAGAGGTCACACTGGAGAAATATTTTTAAGAGGACAGTATATATGGCAAGATTTCAGTGAAGCATTCTGCTTCATCATTTGTCAGGGAATCACATAGAAATTAAAACTTTTAGGAACATGCTAAAGGTAGAGTACCTTTAGTTAAATATCAGTGGGCTTACAAAGGAATGAATTTTTATGAAAATAATAAATGTTTGAGTGCTTTTTGTTACAAATGTAACCTCATCAGACATCAGATGATGCACCTGAGTCTTGTTTCTGATTTCCTTGTGAATAATTCCATAATTTTGTGTGTGTGTGTTTTTAAATGTGGACCATCTCCCAACTCTAGTTGAATTTGCTACAGTATTGCTTGTTTTTTTGCAAGGGATGTGAGATCTTAGCTCCCAAATCAGGTATCAAACCCACACCCCCTGCATTGGAAGGCAAAGTCTTAACCACTGAACCACCAGGGAAGTTCCAGTAATTCCATAGTTTTAAATAAAAGTTGTTTGCTTTTATCATTGTTACTGCAAGTGTTTTAAAAAGGAAATGGAATAGGTACATACATTTGCAGCTTGCTTAACTAAGTTTATAAATAAAACCAAATATTTTATAAAACCACCTTCAAAGTTGTTTTTATAAAATGGATAACTTGAGATCATTTTTAACTTATAAGAAAATGCAAAAGTAGTCCAGAAAATTCCCTTGTATCCCTTATATAACTTATCCCCATAAAAACATTTTATGTAACCATTAACTCTTAACCTTTGGAATTTAGATTTCCCTAGATTTTTTACATGAATTTTTAAATAGTTTTTTTTGGAATTCTAAGCTGCTTTATTACATTCATAGATTTTGTGTAACTGCTATCTCCAGAATGTAAAACTTTAATCAACACAGACACCCTCAAGCTACCTTTTTATGGTCACTCCTTCTATCCAAACCTACCTCTGGCAACTATGTGTCAGTTTTCCATCAATATAATTTTGTCATTTATGAAATTAATTTTTATAACCGGATTTTAAACATTATGTTGTATTTATTGATACAAATTTATAATTTTTTATTAATAAGGGCCATGTAATCTGTTTTTGTCCCTCAGGAAATTGCTCTTAAGACTTTTTTGAGTTGAATTGCTTTATTTTTATTACTGAGTAGTCTACATTATTGGATGTACCAGTTTGTTTATCCATTCACTCTTCAGATAAGTTTGTATTGTTTCCTGGTTTCAACTTTTATAAAGAAAGGTGCTATACATCTGCATCCAGGGTTTTGGATGGACATAAATTTTCATTCCTCTGTAATATATATTCAGGTGTATGATTATTGGGACATAAAGAAAGTTGTGTTTAGCTTTAAAAGAAACTACCAAACTCACTTCGAGAGTGACTTTACCGTTTTACATTCTCACCAGCAGTGTATGATATCCACTTGTTCCACATCCTCTCTGGCATTTGGTATTTTAAGTGTATTTTAGTCATTCTGCTAGCAACACATGATTCAATTGTTCATCCTTACCAGCACTTGGTATTGTGATATGTTACATTACCCATTCTATTAGGTTTGTAGTCATATCTGATCTTGAGCTTGCATTTCCCTCATAGCTAATGATTTTCAATCCTGTTATTATTATTGGACTTATAAGGACGTTTGTACCGTTTGACGACCTTCACCATTTCTGCCCTCCCACCCTTCTTTCAGCTTCTGGCACACAGTCTGTTATTATTTATAAGTTTGGGTTTTTTTTTGGGGGGGGGGGTTTCTACAAATAAAAGAGATCATAGAATATTCAGCTTTCTTAGCTTGATTTATTTCACTTAATATCCCTCATGGTTGCAAATGGAAAGATTTCCTCCTTTTTATGGTTGAATTTCTTTATCCATTCATCTGACAATGAACACTTAAGACTGTTTCCATGTCATGGCTGTTGTAAATAACACTGCCCTGAACACTGATTGTAACAACATATCTTTTCAAGTTAGAGTTCTTATTTTTTTCCAGATATATACCCAAATTGCTAAATCTTATGGTACTCCTATTTTTCATTTTTTGAGGAACCTGTGTACTGTTTTCCTTAGTATCTGTACCAGTCACGAGCTTCTTCATTCTTTTTATGTCTATAGTG EMBV3_21943 TCAAGCCATCTCTGTGCTCCACGAGGTGACCCAGCACACCTTCCAGCTTTTCAGCACAGA Gene GeneID:618947|LOC618947:XM_002689514:130_cdna Constitutive 0 NULL GeneID:618947 8 GENE LOC618947 NULL similar to Interferon alpha-B EMBV3_03847 CCTGAGTCCTCTAGACGTTCAATTCAGGAAAAGACAGGGAGGCAACTATGAGAAGTCTGC Gene GeneID:514192|YEATS2:NM_001105367:28_cdna Constitutive 0 NULL GeneID:514192 1 GENE YEATS2 MGC159897 YEATS domain containing 2 EMBV3_20065 TGGCATGGATACACTGAGTTCTCTTATGTCTAGGGAGTGCGTGTCTGCCCTTGGTGTCCA Gene GeneID:613527|CTNS:NM_001102264:165_cdna UTR3_Alt 3 NULL GeneID:613527 19 GENE CTNS MGC166375 cystinosis, nephropathic EMBV3_19179 GTATTCATTACTTGCAGAAGCGTTGAGATATTCTAGGAGGTGGAGGTTGGAGGATGGGGA Gene BVV0102_223886 - 1 EMBV3_28388 GK000030.2:64659594-64684213 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247177 1 XLOC_151257 Coding TCONS_00247177 XLOC_151257 Coding Coding CAPN6 X:64683217-64708869 = TSS185175 3518 1 TCONS_00247177_2 641 0.0287094940306993 13 0.863358153678219 0 0 0 0 8.60453738354959e-11 7.33430307254601e-11 0 1.2205955665247e-10 0 0 4.55495120526956e-06 7.24988359806348e-11 6.03582224530728e-11 8.75626423230842e-11 8.53565078814115e-11 0.000811190122439497 0 0.000499249014377305 0 0 6.27246941912923e-11 0.000135101787875632 0.00110853182838317 0.000390760420505161 0 1.54236462532995e-10 1.25834791057334e-10 0.000133784511897913 7.45976253824154e-05 3.25563721901452e-05 NM_001192231.1 CAPN6 Bos taurus calpain 6 (CAPN6), mRNA. 0.0 4549 100.00 0.716600341102899 NM_014289.3 CAPN6 Homo sapiens calpain 6 (CAPN6), mRNA. 0.0 4226 86.13 0.999715747583855 TCONS_00247177_2 sp|Q9Y6Q1|CAN6_HUMAN CAN6_HUMAN Calpain-6; 0.0 1276 94.23 0.998439937597504 3 coding 0 0 0 0 0.0699484610639263 0.64017857313676 0.000354257477341774 0.996259786965068 AAATAGTTTTCAGGTTAAGAAAGCCAGAATCTTTGTTCAGCCGCACTTACTGGACAGACTTGGTAGAGGTTACCTGGTGAAGAGCAGCAGCAGAAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCGAGTCTCCTGGGATAACTCAGACTTAGTTTGACATTATGGGTCCTCCTCTGAAGTTCTTCAAAAACCAGAAGTACCAGGAACTGAAGCAGGAATGCATCAGGGATGGTAGACTTTTCTGTGATCCAACCTTCTTGCCTGAGAACGATTCACTTTTCTACAACCGACTGCTTCCTGGAAAGGTGATATGGAAACGTCCCCAGGACATCTGCGATGACCCTCGTCTGATTGTGGGCAACATCAGCAACCACCAGCTGACCCAAGGGAGACTGGGGCACAAGCCAATGGTCTCTGCATTTTCCTGTTTGGCTGTTCAGGAGTGTCACTGGACAAAGACAATCCCCAACTATAAGGAACAGGAATGGGACCCTCGAAAAATAGATAAATATGCTGGGATATTTCACTTCCGGTTCTGGCATTTTGGAGAATGGACTGAGGTGGTGATTGATGACTTGCTGCCCACCATCAATGGAGATCTTGTGTTCTCCTTCTCCACCTCCATGAATGAGTTTTGGAATGCCCTGTTGGAAAAAGCTTATGCCAAGCTCCTTGGCTGTTATGAAGCCCTTGATGGTCTGACCACCAGTGATATCATTGTGGATTTCACTGGCACATTGGCTGAAACTGTTGACATGCAGAAGGGAAGATACACTGATCTTGTTGAGGAGAAGTACAAGCTGTTTAAAGAACTGTACAAGACATTTACCAAAGGAGGTCTGATCTGTTGCTCCATTGAGTTTCCTGACCAGGAGGAACAAGAAGTTGAAACTGATTGGGGTCTGCTGAAGGGCCATACCTACACCATGACTGATATTCGCAAGATCCGCCTTGGAGAAAGACTTGTGGAAGTCTTCAGTACTGAGAAGCTGTATATGATTCGTCTGAGGAACCCCTTGGGAAGACAGGAATGGAGTGGCCCCTGGAGTGAGATTTCTGAAGAGTGGCAACAACTGACTGCAGCAGATCGCAAGAACCTGGGGATTGTCATGTCTGATGATGGAGAGTTTTGGATGAGCCTAGAGGACTTTTGCCGCAACTTCCATGAACTCAATGTCTGCCGCAATGTGAACAACCCACTTTTTGGCCACAAGGAGCTGGAGTCGGTGGTGGGATGCTGGACTGTGAATGATGATCCCCTAATGAATCGTTCAGGAGGCTGCTATAACAACCGTGATACCTTCCTGCAGAACCCCCAGTACATCTTCACTGTGCCAGAGGATGAGCACAAGGTCATCATGTCTCTACAGCAAAAGGACCTGCGCACTTACCGCCGCATGGGAAGACCTGACAATTACATCATCGGCTTTGAGCTCTTCAAGGTGGAACTGAACCGCAAATTCCGCCTCCACCACCTCTACATTCAGGAGCGTGCTGGGACCTCCACTTACATCGACACACGCACCGTGTTTCTGAGCAAGTACCTGAAGAAGGGCAACTACGTGCTGGTCCCAACCATGTTCCAGCACGGCCGTACCAGCGAGTTCCTCCTGAGAATCTTCTGTGAAGTGCCTGTCCAGCTCAGGGAGCTGACTATGGACATGCCCAAGATGTCCTGCTGGAATCTGGCTCGTGGCTACCCCAAGGTTGTCACCCAGATCACAGTGCATAGTGCTGAGGGCCTGGAGAAGAAGTATGACAATGAAACTGTAAACCCATATTTGATCATCAAGTGTGGAAAGGAAGAAGTCCGTTCTCCTGTCCAAAAGAACACCGTTCATGCCATTTTTGACACCCAGGCCATTTTCTACAGAAGGACCACTGACATTCCTATTATAGTTCAGGTATGGAACAAGAGAAAGTTCTGTGATCAGTTCTTGGGCCAGGTTATCCTGGATGCTGACCCCAGTGACTGCCGTGAACTAAAGTCCCTGTACCTGCGTAAGAAGGGTGGCCCAACCGCCAAAGTGAAACAAGGCCACATCAGCTTCAAGATTATTTCGAGCGATGACCTCACTGAGCTCTAAATGTTCAGCTCCAGGGAAGCCTGACAGAGCTCTTCCATCCTTTCATTTTCTGTCAGATGCTAGATTTTATCTAGGATTCCCAATCTTTTGAGAGAGAAATTCACAGTAATTAACTTTCCTTTTCTTCTGATAAATTCCCTATACCTCTCGATCTGAGTAGCATAAGTAGCTACATAACCTATTTACCTCCAGCAGCTGGACAGGGGGAGGTGACAGTCCCATCTGGAGATTAGACAGATGTTGGCCAAGAAAAAAGATCTCTGGGGCTTCTGGGGGTGAGAGTCGAGCAGGACAACATCAGCCTGGATACTCTACCGATGTCATTGCCGTTTTCAGGTCCCCAATATGTCTCCCCTGTAGGGCATGTTGAGGAAGGGGGAGGGGTGATTGAGGCCAAGCAGGTCTAGCCTGACATCCCAGCTCCTGACTGAACACTAGAGCGGTCCCAGCAGCATTTTACACAGCACCCAGAGTCTGTTCATACGTCCCCAGCCCTTACCACCATCACTACCACCACCATCAGTCAACACCACCATCAATCTCCACCTCTGGAAAGAGTAGTCCTGCCCTAATCCAAGTCACCCCCCACAGTAGGTTTTACCTTCATGTTGAGGAAGCTTCCTAGGTGCTTAATCAAGAGCTAGAGTTCCCTGAGGCTCAGACAGTGGAAAGGGCCCGAGCTCAAGCTCCATGGAAACCAGCTGTGTGCCACAAGAGGGAAAAGTGGAAGAAGCTGCAGTGGGAGACAAAGCCTCGGTCCCCCACCCATCCACACACACCTACACTCACACACGCGCACATGGGCGCGCACGAACTACCGTTCAGGCAGTCAGTGGGCAAGAGGAAAGATGAATAAGGACCACACAGGATCAAAGGATGAAAGAGTCCATCCAGGCATAGTTCAGCTAGTTTGGGGCCCCTGACTGCAATGTGAAACCTCCTGCTGCTGCTAGGTTTACAAACAAGCCCATTGCCCTGTGCCTTCTAATATCATTGGTACTGAAGACCCCATCTGGGGGCTTGAGCCCCCTCAGGCTTCCCAGGTGGGAAGTGTCACTCCCTGGGGGTGTTTATTTGCCCTCTTGTATTTTTTCAGTCCTTCTACAGAATTTTCTCTGAAATGTTCTTCCCTCCACCTCATCTATCAACATTTTACCCCTCCTTCAAGGCCCAGCATAAAAGCCACATCCTCCATGAAGCCTCTCCCCATCCTCCAACCTCCACCTCCTAGAATATCTCAACGCTTCTGCAAATAATGAATACAATGACATAGTTGTAGCCCTTAGTCTAGTTCAGCACGCAATCATTTAAAAAATTATTTTGTAGATTATTTTTAGCTCACTCTTTCCTACCACGTTTTTCAGTCTATCTTCTCTACTGCCTCCACCACACTGCCTTACATAATCCAAAGCACAATAAAATTGACATT EMBV3_13718 TTGTGTGCAGAAATGCTCCCAAATGTGGAATCTGATGCAGGGGCAAATAGCACTGTGGCC Gene GeneID:510379|MON1B:NM_001037454:23_cdna UTR3_Alt 2 NULL GeneID:510379 18 GENE MON1B MGC126906 MON1 homolog B (yeast) EMBV3_06757 GGTGACTCTCCACTTTGTGCCCTGTGTTTACATCTACTGCCGGCCCTTTATCATGCTGCC Gene GeneID:615998|LOC615998:XM_002693831:114_cdna Constitutive 0 NULL GeneID:615998 15 GENE LOC615998 NULL similar to olfactory receptor Olr325 EMBV3_32426 CCTGCACCCCATGATGAGACGCTGTGGACCTTTGCTGACAGGTGGAAGTTTTTTGAGGAA Gene GeneID:523644|SHROOM2:XM_002700461:29_cdna Constitutive 0 NULL GeneID:523644 X GENE SHROOM2 NULL shroom family member 2 EMBV3_23887 GCACATCCCCACCCTTTGACAACTTTAAATACTAGTTAGACACTTAGATGGCTCTGTTCC Gene GeneID:540909|C11H2orf42:NM_001034714:68_cdna Constitutive 0 NULL GeneID:540909 11 GENE C11H2orf42 C2orf42 MGC127654 chromosome 2 open reading frame 42 ortholog EMBV3_02388 CAACTATAGAAGATCTTATAGTCCTAGAAAACCAAACTGCAGCTGGAATACCCAGTACAG Variant GeneID:768310|FUSIP1:NM_001078126:305_cdna 519^569 4 EMBV3_22168 GeneID:768310 2 GENE FUSIP1 MGC128430 FUS interacting protein (serine/arginine-rich) 1 EMBV3_02580 CATGTTTGTCCTCCCGTGACTGAGCAACTTGTCAACAAACTGTATTATGGAAATCATGAT Gene GeneID:286886|GOT2:NM_174806:72_cdna Constitutive 0 NULL GeneID:286886 18 GENE GOT2 NULL glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) EMBV3_19794 AACCTCCGGAACCCGAAGCTGGAGAAAGCAGAAATACTGGAGTTCGCCGTGGGCTACTTG Gene GeneID:617638|HES7:XM_002695855:317_cdna Constitutive 0 NULL GeneID:617638 19 GENE HES7 NULL hairy and enhancer of split 7 (Drosophila) EMBV3_37795 TCAGCTGTAAATGTAGTGACCAGCAGAGGAGCCACAGAAGGGAGGAACAGTGGGCAAAGT Gene BVT0102_138344 + 0 NULL GK000004.2:55896663-55994118 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22560 CAGCTGGAGTTGAGGATGGTGCAGAGCAAGAAGGACATCGAGAGCCCCGAAATCGTCGTC Gene GeneID:514168|PDXK:NM_001075651:42_cdna Constitutive 1 NULL GeneID:514168 1 GENE PDXK MGC152058 pyridoxal (pyridoxine, vitamin B6) kinase EMBV3_12801 AGGACTTCTGACGGACTCTTGGTATTAACTCCTGTCGGTACCTGCCAAGTGGAGAGCTGT Gene GeneID:505766|LOC505766:XR_084698:27_cdna Constitutive 0 NULL GeneID:505766 6 PSEUDO LOC505766 NULL similar to BMP-2-inducible protein kinase (BIKe) EMBV3_04429 ATAGCCGACCTACAGCTGATAGACTTTGAGGATTTACTAACCAGACATAAAGTGTTGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06094 AAGTGACAAAGTGAGAGTGATAACGCTGGTGAAGAACCGTGGAAAGGGCGGAGCGATTAG Gene GeneID:506566|ALG5:NM_001045943:47_cdna Constitutive 3 NULL GeneID:506566 12 GENE ALG5 MGC137195 asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae) EMBV3_36741 GGCATCTGGCTAATGCTTCCAAGTCTGTCTATTTACCCGCAAACGCTCCCTGCTCCCATT Gene GeneID:785664|STON2:XM_002691077:175_cdna Constitutive 0 NULL GeneID:785664 10 GENE STON2 NULL stonin 2 EMBV3_10734 GCAGGGACTGCACCTGTAGGAACCAGGACAGGGAAGAAAAAGTACTCTGACAGTGGGAAT Gene GeneID:614333|BACE1:NM_001046531:125_cdna Constitutive 0 NULL GeneID:614333 15 GENE BACE1 MGC137940 beta-site APP-cleaving enzyme 1 EMBV3_09090 CCCCGCATATCACTTTCTCTAATCCCACCAACTCATTTTTAGTAGTATGTGTGGGCCAGG Gene BVT0102_054835 - 0 NULL GK000012.2:6214962-6938604 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034472 TCONS_00233183 2 XLOC_020687 XLOC_142665 NonCoding TCONS_00034472 XLOC_020687 NonCoding NonCoding - 12:6364895-6366558 - TSS25460 1663 1 TCONS_00034472_1 48 0.506915213469633 1 0 8.34717351197335e-10 7.55294998933707e-07 0 0 1.3430468344736e-06 0 0 0 0 0.000411407190845502 0.000767496433422496 0.00016884960262657 0.000210214201268645 0.000191650917828039 0.00126996477062549 0.0135641318459335 0.00252741940803008 0.00766436854674063 0 3.60363795826903e-07 0 0.00424968258548582 0.00400432867505553 0.0054478244682385 0 0 0 0.000974975121570472 0.000467746776754344 0.0027204390629365 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 8e-68 262 85.84 0.137702946482261 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 1e-09 69.8 87.50 0.0330727600721588 0 noncoding 0 0 0 0 -0.0644343619631274 0.597147675601465 -0.0141406486926897 0.771811902889454 GAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAATGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAATAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCGTGCTCCTTGGAGAAAATCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAACCAAACGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTTGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACAGCTTTTGCTTTTTACCTTATTATCAGACAAGAAAAAACCTTGACTTCTCAGGCTAGGAGCCACAGAACATTTGGATTTAGTGATCTAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTTTAAAAGATCTTTTAATTCAAGAAAATAAAATGTCAGGGCTATTAGACACAAGAACAGACGTCTCTTAACATTGCTGGAAAAGACTGGCCCAGTTCCTGGCCCACACATACTACTAAAAATGAGTTGGTGGGATTAGAGAAAGTGATATGCGGGGTGAGAATGCTGTAGAAAAAAAAAAAAAAAAAAGGGTGAGGGAGAGTTTAAAACCTTGAAGAGTAGTGAGTTTCCTGTTGTTGGAAGTATTCAAGCAAAGATTAGATGGTTACTTGTCATCTAAAAAGCTATAGACCAGATTTGGTTTACAAAACTAACTGGAGAAGCTTATAAACATGTTGTGCAACACCTCTTTACTTGCTTCTCATATTTAGGTGTGCCAAAAGTTTTAAAAACTGATAATGCCCCTTTGAAGCTGTGGAGAGATTGTTTACTAACTTTAAATGATTTCCAAAAATTATTAGGGGACATTAATTGGATACGCCCTCATTTAAAACTGACTACTGCAGATTTAAAGCCTTTATTTGATTGCTTAAAAATTGATCCTAATTCCAGTTCTAAGAGAAAGTTGACTAATGAGACAGAGTTAGCTCTTGTTGAAGTGTATGAGACTTTAAATGGTCAGTTAATTAGGATTAATATTACCAAAAGATGAGATTAAATTATTCTTGCCACAAAACATACACCTACCGGGTGCTTATGACAAAAAGGCCCATTGGT TCONS_00036102 r 5' 1163746 TCONS_00036102 r 5' 1163746 EMBV3_10053 GGAATCGGATGGGCTCTTCTGCCCACAGTTGTGACTGAGAATGCACAGGGACTTGTTTCT Gene GeneID:519857|PRDM6:NM_001103255:14_cdna UTR3_Alt 2 NULL GeneID:519857 7 GENE PRDM6 MGC148761 PR domain containing 6 EMBV3_03139 TTAGATGCAGAGCTTCCAAACAGCCTAAAGGCAGGGTGAGCTACGTGCGCCAGAACCTCT Gene GeneID:538506|LOC538506:XM_002694851:781_cdna UTR3_Alt 2 NULL GeneID:538506 18 GENE LOC538506 NULL similar to Genetic suppressor element 1 EMBV3_01931 TTTAAGACCGTATCCGTGCTAACACCGACTATGCAGGGGCCTCCATGGCTGTGATAAGCC Variant GeneID:539436|ITPRIPL1:XM_002691135:140_cdna 251^354 1 EMBV3_15507 GeneID:539436 11 GENE ITPRIPL1 NULL inositol 1,4,5-triphosphate receptor interacting protein-like 1 EMBV3_33232 GTTGTTGTTCTCTTTTTTGGCTGCATGGCACGTGGGATCTTACTTCCCCGACCAGGGATC Gene BVV0102_023228 + 0 NULL GK000011.2:60381306-60397413 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027994 TCONS_00027993 TCONS_00027995 1 XLOC_015382 Coding TCONS_00027993 XLOC_015382 NonCoding Coding CCT4 11:60395526-60398294 j TSS19721 2234 2 TCONS_00027993_3 82 0.165174574753805 3 0.193711601011926 1.2369866188968e-05 0.000166836541175174 4.86879306554144e-09 3.74657358978536e-09 2.59112567447848e-08 4.30090277287749e-09 2.95269098874337e-08 9.31273515957829e-08 0.000977882618284866 2.29170156470529e-08 1.98442255695254e-09 0.000451039673410628 0.000152177669611355 0.000685158756389894 0.000216134118212764 0.0189490393592657 0.0102114690055525 0.0181061433868064 0.00196661197193421 0.000750281413829692 0.000188832121643298 0.00881347075164174 0.00815568139842447 0.012477152214234 3.17670657530692e-08 1.29305078320401e-08 0.000279745507062506 0.00113365831172993 0.0014869713454939 0.00134695427713385 NM_001038194.1 CCT4 Bos taurus chaperonin containing TCP1, subunit 4 (delta) (CCT4), 7e-159 565 99.68 0.141002685765443 XM_005264083.1 CCT4 PREDICTED: Homo sapiens chaperonin containing TCP1, subunit 4 (delta) (CCT4), transcript variant X1, mRNA. 2e-96 358 84.08 0.144136078782453 0 noncoding 0 0 0 0 -0.998367385167177 0.0334321878491513 -0.12746979494325 0.0439220026092505 GACAAGACTGAGCAACTCAACAACAAGTTCCAGGGTGGTATTTCCAACATACTGGAGGAACTGGTTGTCCAGCCTCTGTTGGTTTCAGTCAGTGCACTGACTCTAGCAACTGAAACTGTCCGGAGCATTCTGAAGATTGATGATGTGGTAAACACTCGGTAATCTGGTTAACATTGTCTGACTGGCACCATCATGGCCACTAATGGTGCAGCTGGAGTGGAAGAGCACCTTGGCATTCCTTTGGAAGATTGTTATGAATTTCTGGGCCTGGTCTTCCAGTTGGCATTTGCTTGAAATTATATTGACACAGTTTAATGAAAATATTAAACACATGGTTTCAAAAAGCAGATTAATTTATTGCTCTATACTCTGCATTATTCCCACTCTCTCCTAAATTCTGTTATTTCTGATTGACTAGAAATCTGTGAGGAGAGAAAAAAGGAGCTAACATTTGCCTGTTAAAGTCTGAAGGACTTAATGCTGGGTACTTTTAAGTTTTGTGTTAGGTTGTGGTTTTTTGTTGTTGTTCTCTTTTTTGGCTGCATGGCACGTGGGATCTTACTTCCCCGACCAGGGATCAAACCCACACTCCCTGTATGGGCAGCAAAAAATCTTAAACACTGGACTGCCAGGGAAGTCTCCAGTTTTGTGTTTATTGATAGAAGTATTGAGAAGGAAAAATGGCCCAATATGCTCATCACCCTGATAACCCACCATTTTCAGTAATACATATGCTGTTTGAAAAGTTAACAGTACAGAAAGAGTGAACAATGAAAGTTTTTCTCATTCTTATCCCATTTTCTAAGAACCACTGTTGTGTTAATTGGGATTCCTTCTAAAAATAAAAATATGCATATATGTAGCAAATTTTGTTTGTATAAGTAAGTCTTTTCTCAGTGGTTTAAAACATCTTAGTCTTACACCAAGAGTATTATAAAATTTAACTAGTTCTGTCCTTGTTTTAGTCACCATCTAGTCAACTTGGCACACATTCTATATATAGCTTAGTGGTCTTTTTTTAACTTGTCAAGCACTCCTTTATAAACGCTTTCATGGCTTTTGATTACCTTTGGATAAAGGCCAGACCTTTAAGGTGGATCACAAATTGAGCCTTAAATCCGTGATTACTCTCATCATCTTTTGTATTATATATAAAGAGTATTATGAAAGCAGTGGATGGAGGGGGGGACTCCTAAAGGTTTTGGAGAACTTCAGCCAATCAGTTCCTTTGTATCTGATAACTCCAGTAGTTAATTAAAATGACTAATCTGATAAGTGGTAAATTTAGATAAGTCTTTGGATAGTCTGGAATTTAATAATTCAGTAATTATTTCTCTTTTTAGTGGGTATTAGGACCTTGCTGTTGGAAAAGAATCATTTTATAGCTGCCATAAAACTGAATGTTGTATAATGTAAACACTTTTAAGTCAAAATACTTGAGCCAGAATTTTTCATATTGGAACTTCTAAGAGTTATTCAGCACCCTTATGTGTGTCTGTGTCTTAGGCTATACCTGTATATCTAAATATGTTTAAAAATTTGTAAAAGGAATGCTAACAAGACAAATGTTAGTCATTAAGTTTGATGTAAATTAAGCCACTATTTAGGATTTGATTGGGTTTTACAAGTTTATAAAATTTATAAAGTTAATGTTTTCGGAAGCAGTGGTGGTGCTTTGTCACTGAAAGGCCAAATGACAAAACTCAAAAATAGTGGTCGGATTCAGTTAGATAATTGTAAAGCAATGAAAGGAAAATTATCCTGTTAAATATTTAAGAGGTATGCTTTGAAATAGGAATGATGACTATCCTAATGAGACAAAGGTTTTGCATACTTTTTTCCTCTTGAGTACTATAAATTTTTTCACTCTCATTTTTATTTTTTTGGCCACACCCCGTGGCTTGTGGGATCTTAATTGCCAGACCAGGGAACTCAGGCCCATAGCAGTGAAATCACTGAGTCCTAACCACTAGACAGGCAGGGAATTCCCACCCTAGCTTTTCATTAAAAAACAGTTTACAGAACAGTGTGAACACCCTATACCCTCCAACTATTGACATTTTACCATAGAAGTCAGTTCTATAATACGATGTATCCTTAAAAATCTTGGTACGCAAAATAGTGCAATAGAAACCACAGGGCTTAGAGAAGAAATGTGGTTGGAGACAACCCCAAGACTTCATCAACAACACAAAAGGAACCTGATCAAATAGTTTAACAAACAGTAATTGGTT EMBV3_01250 CCATGGCTGGGGTGGCGCTGATAGGAGCCCTGGTGTATTTTGTGTACGTCATAAGTACTA Gene GeneID:404118|CEACAM8:NM_205788:97_cdna Constitutive 0 NULL GeneID:404118 18 GENE CEACAM8 CEACAM1 MGC142545 carcinoembryonic antigen-related cell adhesion molecule 8 EMBV3_06660 CTTATGACACCAAAGACGCTTCTGTCACGGACTGGGTGATCAATGAATTGCGCTTCCACC Gene GeneID:532262|TLR8:NM_001033937:8_cdna Constitutive 0 NULL GeneID:532262 X GENE TLR8 NULL toll-like receptor 8 EMBV3_03331 AACTACGTGGTCCAGAAGATGATCGATGTGGCAGAGCCAGCCCAGAGGAAGATCGTCATG Gene GeneID:535450|PUM1:XM_002685620:287_cdna UTR3_Alt 3 NULL GeneID:535450 2 GENE PUM1 NULL pumilio homolog 1 (Drosophila) EMBV3_42362 TCGCATTGATTCGCGCCTGGCAGATTCCCTGATTGGCAAGGCAGTAGGTCATGTGTTTGA Gene GeneID:540146|SPIN4:XM_002700137:130_cdna Constitutive 0 NULL GeneID:540146 X GENE SPIN4 NULL spindlin family, member 4 EMBV3_07006 CCGACAAGAAGATTGAAGGGGAAAAGCACGACATGGTCCGCCGTCGAGACATCAAAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05268 AAATATGACCCTGATCCAGCCCCTCGGTTGGAAAACTTGAGATGCAGAGGAGGAGCCGTA Gene GeneID:506867|NSL1:NM_001101876:42_cdna UTR3_Alt 2 NULL GeneID:506867 16 GENE NSL1 MGC159505 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) EMBV3_24873 GAAGGTCCACTTGACAGCCTCCAAAACAGGAAAAGGGGAAGGAATGATGCCAACATTAAA Gene BVV0102_137922 - 1 EMBV3_24255 GK000024.2:32915398-32921537 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140027 TCONS_00140022 TCONS_00140028 TCONS_00140021 TCONS_00140024 TCONS_00140025 TCONS_00140026 TCONS_00140023 1 XLOC_085045 Coding TCONS_00140027 XLOC_085045 Coding Coding TTC39C 24:32919040-33025398 j TSS104616 4656 2 TCONS_00140027_1 258 12 0.956335737187021 0.000697379827825853 5.49776035927126e-05 3.61466152718727e-05 4.34587625535384e-05 0.000162621304875773 3.96530312804927e-05 0.000157355711115208 0.000129207800556022 0.000471435920586941 5.10587051262005e-05 1.54574955842579e-06 4.6065648558698e-05 4.38095287416316e-05 1.92571746696371e-16 1.51333551025845e-13 3.59991027698159e-07 6.29221234075192e-18 1.56773798704853e-11 0.000148215418522843 0.000118014176856327 0.000118018951865743 1.89253132270108e-07 0.000479720449128825 9.55279335474562e-05 0.0001072667112533 0.000116258218501292 0.000240662143725631 4.5113999993009e-05 7.7979742741211e-13 7.82508024679079e-16 XM_003583968.2 TTC39C PREDICTED: Bos taurus tetratricopeptide repeat domain 39C (TTC39C), 0.0 2336 97.72 0.286082474226804 NM_001135993.1 TTC39C Homo sapiens tetratricopeptide repeat domain 39C (TTC39C), 0.0 1889 86.05 0.330541237113402 TCONS_00140027_1 sp|Q8N584|TT39C_HUMAN TT39C_HUMAN Tetratricopeptide repeat protein 39C; 3e-178 508 95.82 0.996124031007752 3 coding 0 0 0 0 -0.0311417570947117 0.861680063382537 0.0150830110787378 0.777013367503905 GGGGCGCGGTGTGAGGGCCGGGGCCCGGGTGGCGCGCGGGGGCTGCAGGAAGCGAGGGCAGCCGGGGCTCGGCCCCCGCTCCGCCCGGATAGAAGACACCCGGAAACGGATTCACCGCTTCGGTGGCCGCGCGAGCCGGGAGTCTCGGAGGGGGAGCGGGCGGGCGGGCGGCTGCTGAGTAATCCCCGCGGCGGCGGCGGCGGGAGGCGGCGGCCTGGGCGCCCACGTCCCCGCCGCGCGCGCTGCAGCCCGGCCCCGGCTCCTCCCTCCGCGCCCGCCCACCGCGCCCGCGCCCCGCGCAGGTAGAGCCGGGCTCCGGGCGCGCGCGGGGGCCGCAGCGGCTGCCACCCCACCTCACCTCGGCCCCGAGCAGAGCCTCGCGCGCCCATGGCCGGCTCGGAGCAGCAGCGGCCGCGGCGGCTGGACGACGGAGACGCGGCGGCGGCGCCCCTGCAGGACGCTGAGCTGGCCCTTGCCGGCATCAACATGCTGCTCAACAACGGCTTTCGGGAGTCGGACCAGCTCTTCAAACAATACAGAAATCATAGCCCGTTAATGAGTTTTGGAGCCAGCTTTGTCAGTTTTTTGAATGCCATGATGACATTTGAGGAAGAAAAAATGCAGTTGGCGTGTGATGACTTAAAAACTACAGAAAAGCTGTGTGAAAGTGAAGAGGCTGGAGTAATTGAAACAATCAAGAATAAAATTAAGAAGAATGTTGATGTCCGAAAATCTACCCCCTCTATGGTTGATCGGCTTCAGAGGCAGATAATCATAGCTGACTGTCAAGTTTACCTGGCTGTGCTCTCGTTTGTAAAGCAAGAGTTGTCAGCATATATAAAAGGTGGGTGGATCCTTAGGAAAGCCTGGAAGATTTACAATAAATGCTATCTGGACATCAACGCCCTTCAGGAGCTGTATCAGAAGAAGCTAAGAGAGGAACGTTTGACTTCTGACGCTGCAAATGATAACCACATTGTGGCTGAAGGGGTGTCTGAGGAGTCTCTGAACAGACTGAAAGGTGCTGTGAGCTTTGGATACGGCCTTTTTCACCTTTGCATATCCATGGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCTGGGTTTTCCTGGAGACCGCCTGCAGGGGCTTTCTTCACTGATGTATGCAAGCGAAAATTAGCGCTGCTCTGGTATCATACCGTGGTCCGCCCATTTTTTGCCTTGGATGGAAGTGATAACAAAGCCGGCCTGGATGAAGCGAAGGAAATTCTCCTCAAAAAAGAAGCTGCTTATCCAAACTCTTCCCTCTTTATGTTTTTCAAGGGACGCATACAACGACTAGAGTGTCAAATCAACAGTGCCTTGACTTCCTTCCATACTGCTCTGGAACTTGCAGTAGACCAGAGAGAAATCCAGCATGTTTGTCTCTATGAAATTGGTTGGTGCAGCATGATAGAGCTGAATTTCAAGGATGCGTTCAATTCCTTTGAGAGGCTAAAAAACGAGTCCCGGTGGTCCCAGTGCTATTATGCCTACCTAACCGCAGCTTGCCATGGAGTAGATGATTCATCTGTCGTTGGATTAAAGTATTTGCTTCTTGGTGCCATACACAAATGTCTAGGGAACTCAGAAGATGCTGTTCAGTTCTTTCAGCGAGCTGTCAAAGATGAGTTATGTCGGCAGAATAACTTATACGTTCAGCCATATGCTTGCTATGAACTTGGCTGTCTTCTATTAGACAAACCAGAGACTGTAGGAAGAGGCAGAACTCTCCTCCTTCAAGCAAAGGAGGATTTCTCTGGCTACGACTTTGAAAACAGGTTGCATGTCCGCATTCATGCTGCTCTGGCCTCAATGAGGGAACTGGTCCCTCAGTGACAGACCCCAAGTTCCTGCTGTGTCCTTCCCCAACACAGGTTCTGCACTTTAAAAGCAGAGCACACCGCTCTTATGAAGATCAGCTTTTCTTCGAAAACCACCTGGACCCAGGACACGTTTCCTCAGTTAGGCTGATGTATTCAAGATCTCCTCTTTTAAACACATAGCTTAAAAAAGAAAAGTGATGATGATGGTAGTGATAATAACTAACCACCTGGGGAGAGGGTTAAGTGACCTTGTTCAAACATTTTAGTTTTGTGATTTATTATTTTTAAAATAAAAGTAAACTAAATATTCAACCTGCGATCTTGTAGGAATGCATACCTGAAGCACACATCTGACTGGGTAACACAAAGTACCTGTAAAATTATTAACAGTATCACAACATAGTATTTATATTGTGTTTTGAAAAAATAGCAGTGCTTTCCAGTTTTACTTTATCCTCAAACTATTCCTGTGAATAATAGCACAGATATTCTAATCTCCATTGTCCAGAAAATGAGACTCAGGCACAAGAAAGCGAATTGACTTATTCCAATTAATTATTCCTCTTATTATAGAGTCTTGAATAGAATGCAGGTCTCCTGACCACAGACCAAATAATTCTTTTATTGTAAAAACAAATATGTTAATAACCCAGAATTCCAAGTTTTCCTTATTAAAAAAAAAATACTTCTCAGCTGAAGTTGTGTCATCAAAATATTTATCTCCAGATTGTCTACAAAAATGTTTCAAAGGACAAACACTTTTTTCCCTTTGAAAGCCAGCAACATGAAAGCAAATAGAAGATAGTTTTACAGCCCAAAGTATAGCTGTTTTGCTAATGTATTAGAAGACCTAGACTACAGACAGGATTAATAACACCTACATTATAGGTGTTTCCCTTCCTTTGTAATTAATTGTCTAGTTTCCAAGTTTTGGAACTTTTTCAGCAAATTGCATGAAAAGGCTGTTCTTGAAAGCACACAGATTTTTTTGCCTCAAAGTATTTGCTGGTGAGGGATTTGCTGGGCTGTCTGTTGCCAGGATTTAATCATTTTCCCCTTAGCTCAGGTTATTGATATTGTAAATAGACTTCAAAGTTATTTTTTAATCCTTTGTTGCTAATTTTTATTGTCATTGAATTTACCTCTTTGTTCAGTACTGCATACCTGTATTTTCAAAGAATCTAAATACCTCAGTCATTTTAAAATTTATTTCATCATTGTGTGGCTAACCTGGATCAATCTTAAGGGTAGTTATTTTTAAAATTTTCAGTGCCCTATAGAATATCCTCTTGGAGTGTCATTTAATTTACATATCGTTTTAGCTGAAGTATGATCTCATAGAACATCAGCAGTTTTAATATTTCACTTCAAAACAAACATGGGAGGGGCAGCTACAGCTTTGGCAGCTTCAATCTACTTAATCAGGTTTTGAGGGAATAATAGTTTCTTTTAAAAAAATGCTTGCTCTTCACTGACTTTGGCTGAACTTGCTTCATGTTTTTTCACTTACAAAGTGCTTATTAACGTTGACTTTCTTTCTAGTGGGACTGCTGCATGGGTTTTAGATGCTAGCCAGAGAGAAAAGATGCTACGTACTTTCATGAACGGGAAGATCCAGGAGCCAGGTAGATGCCTTCTGAAGGGGAAAATTGGTGTCTAAAAGTTTTAGATACCTGGTTTGAAGGAAAGAATGTTATGAATCTTTAAAATATGGCTCTCGCCATTTTCATGTCCTTTTGGTTATAGTTTATATGGCAAATTTCTCACTTATGATTGTGGAGCGTTCGGAATCATGAAGTTCTTGCTCCAGTATTCATACTTATTTGAATTTTCAGATCAGGTATTGTTCAAGCTACTTACTATTCAGTAGTAAAAGATTACATAAGGCTCCATACTTTTCTGCTTTAACTGCTTTAAAACTTTTTGTTTTTCCAGAGAGATCTCAGGATTTCAAATAAATCTGTGTTCAGTTCACTTCACTGAATACACATGATTGCAACACTGCTCAGTGAGTCGTCTCTACTAGTCCGTTTATAGATCTGTTTATAAACTGTCTCTGCTGGGTTTGATGCAGGATAGCCCTGGTGGTTTATCTGGAACCTGGTGGTAGAGCTCTGAGAGGGGGTAGACAGTGGTTCTAAAAATACTAAAATAACAAAACTGTGCTGAGTACACAAAGCCATTAGATTCACTGAAATCTGAGTACAGTATTGAGTGGAGTAATTTATAACAGTCTGGCCTGCGTGCCATGACTTACCCAACCTTTGAGTTACTGTTACCTGCCTGGAAACCTAGTTTGGTGTAAATTGCTCTTTACCCCTCTCTGATGAAGAAAATAATCAATAATCATGTTTGCATCTGTGTGTGCTTTTTTAATGTTGGCATCATTCCTTCCCCTTTTCCTGTTTTGGAGGCTGTCAAGTGGACCTTCTAATTTATAAGTGTCAGATATATTTTTGTATTAGATTGTGCCTATGATGAGAGAAATCTCTAATGTATATTTTCTGTACTTGGAACACAATTATAATCTGACACACTTGGAGGCATGGTCTAGTAATAATAATATGTACCTCTGTGATTAATGTATTTAAGATTTTACTTTTATTGGGATAGGTATCTTTTTGATTTTAGCACATGATAGCTAAGTAAAGAATTATTACTTTCAGATGTCACAGAAAATTAGAATATTTATTGTCCCATATTGTGTAAGTCAATTATTTAGAGAATTTGCATTTTTATCTTTCTGCCAACTAAAATTGAAAGACAGCGTATACATGGTTTTTTAAAACACACACACACACACACAC EMBV3_35062 GTCCCAGCCCGTGAGCATCCTCGCGGTCAGGATGTTAAAGTCTTCAGTGAAGACGGGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43125 GCAAAATAGATCGCGGATTCAGGTGTGGCTTTATGAGCAAGTGAATATGCGGATAGAGGG Gene GeneID:531493|SNRPE:NM_001083459:73_cdna Constitutive 0 NULL GeneID:531493 16 GENE SNRPE MGC140763 small nuclear ribonucleoprotein polypeptide E EMBV3_16947 CTGTGCTGGGCAACACGATCTACTGCCTCAACCACCAAGTCACAGCCACCTTCACCGTCT Gene GeneID:539100|KLHDC7B:XM_002687989:92_cdna Constitutive 0 NULL GeneID:539100 5 GENE KLHDC7B NULL kelch domain containing 7B EMBV3_35391 ATTCAGACGGACTTGTTGTTGGGCGTTCAGATGCAATTGGACCTAGAGAGCAGTGGGAAC Gene GeneID:512533|FRG1:NM_001075566:40_cdna Constitutive 0 NULL GeneID:512533 27 GENE FRG1 NULL FSHD region gene 1 EMBV3_43729 GTCTTTGGCCAGTAACCTGCTTTTGTACTCTGCTGGTGCCGACTCCCCCACCTTCTTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31161 CAACAACTTCTAGTTCAACATCCTACTCCCTCCACCCTCACTTCACACACCAGGAAACGG Gene BVV0102_194751 + 0 NULL GK000007.2:40266424-40282368 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220444 1 XLOC_133761 NonCoding TCONS_00220444 XLOC_133761 NonCoding NonCoding - 7:40281377-40281637 - TSS164442 260 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00165482941789619 0 0 0 0 0 0 0.000135489855644585 0 0 0 0 0 noncoding 0 0 0 0 0.0477814784816631 0.743191972513382 -0.0912220630551951 0.548608979240819 GTCTTTGCTTTACTTGCAAGTTTGGGCAAGCCTCCGTTTCCTGGTGTGTGAAGTGAGGGTGGAGGGAGTAGGATGTTGAACTAGAAGTTGTTGATTAGCTGTAAAATTTCAACCTTGTTTTCTTCCTAGTCTTAGGCCTAAAGCCAGCCACTGGACCCCAGCTCCCCACCTGTATAATGGGTGTGAGCTCATTCCTGCGGCTTGGGGTGGTAGCGCTGCCTTATAAGGCAGCAGAGGCCGAGGGCGGGCGAAGCCGTGTG TCONS_00212925 . 5' 727 TCONS_00212925 . 5' 727 EMBV3_43598 GCACATTGCAAGGGGGCTGCAACTTTTAGAAAACCAACAATGGAAAAGGGAGCCCTGCAC Gene GeneID:317707|HTR1B:XM_002690033:25_cdna Constitutive 0 NULL GeneID:317707 9 GENE HTR1B NULL 5-hydroxytryptamine (serotonin) receptor 1B EMBV3_09674 TCAAGTAGAAGGTTTCATTGCAGGGTTTTTTGGTTTGTTTATCTTGGTTGTGAATGATGC Gene GeneID:531418|CLASP2:XM_002696923:457_cdna Constitutive 2 NULL GeneID:531418 22 GENE CLASP2 NULL cytoplasmic linker associated protein 2 EMBV3_34726 TTGACACCCTTCGGCCAGGCTGCACTGTACCCCTTCTCTGCCAGCGCCGCGCTGCCCTGT Gene GeneID:539207|BHLHE23:XM_002692407:356_cdna Constitutive 0 NULL GeneID:539207 13 GENE BHLHE23 BHLHB4 basic helix-loop-helix family, member e23 EMBV3_39728 CAACCTCAAGTCGTGCTGTGTGCCCACCAAGCTGAGACCCATGTCCATGTTGTACTATGA Gene GeneID:281867|INHBA:NM_174363:10_cdna Constitutive 0 NULL GeneID:281867 4 GENE INHBA NULL inhibin, beta A EMBV3_28461 TCTCCACCTGTGTCTCCCACATCACAGCAGTTATCCTGTTCCTTGTGCCCTGCTTATTTG Gene GeneID:515790|LOC515790:XM_002692905:137_cdna Constitutive 0 NULL GeneID:515790 15 GENE LOC515790 NULL similar to olfactory receptor 1257 EMBV3_38883 CCTTAGTGATAACGGGGAGAGTTGTGCTGGCTCTCACTTTCTAAACCTCCTCAGTGATGG Gene BVT0102_022765 + 0 NULL GK000008.2:26010692-26631847 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39960 CTAATGAGTTCCTAGATTGAGCTGTTGGGGGACAGAATGTATTCACCTGGGACCAAACGC Gene BVT0102_045637 + 1 EMBV3_36850 GK000022.2:30080250-30101333 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130720 1 XLOC_079428 NonCoding TCONS_00130720 XLOC_079428 NonCoding NonCoding - 22:30092771-30093540 - TSS97587 769 1 TCONS_00130720_3 84 0.315994798439532 1 0 0.000159234406267211 0.000104535113055131 0.000926603203277829 0 0 0.000683780136243188 0 0.00236895682183848 0.000348848777391362 0 5.95366465308772e-06 0 0 0 0 0 0 0 1.86500252055776e-05 0.000430175780433889 1.18429045914747e-05 0 0 0 0 0 0.000190479600604616 2.49809150264416e-05 0 0 NM_001102073.1 ILDR2 Bos taurus immunoglobulin-like domain containing receptor 2 (ILDR2), mRNA. 8e-39 165 89.52 0.159947984395319 0 noncoding 0 0 0 0 -0.0933554021219667 0.389232061445948 -0.0216799369493805 0.638052344969388 GGGGACTGCGGGGACCTCGGGGCCCAGAGAGCGGAGTAGGCACTCTCTGCTCGTGGAAAGGCATCCTTGACGCCTAGTTGTAACATGGGCCAAGTTGCCTCAGTCATGTCTGACTCTTTGCAACCCTATGGACCGTAACCCCCCAAGCTCCTCTGTCCATGGGGTTCTCCAGGCAAGAATACTGGAGTGGGGTGCCCTGCCCTCCTCCAGGGATAGTTATAACATATGCTTGTTCTAATGAATATCTGTTGCCATTTCTCTTGTCTATTTCATTTTATGTGTTTCGGGTTTTAAGAAATTTTAAATCTCATGTTGCAGACGAAAAATAACTAATGAGTTCCTAGATTGAGCTGTTGGGGGACAGAATGTATTCACCTGGGACCAAACGCTGGTTTTTAAAAGCAATTCGCAGGGGCTTCTCTGGTAGCCCAGTGGTTAAGACTTCACATTTCTAATGCAGGAGGTGCTGGGTTCGATCTCTGGTCAGGGAAGGAAGGTCCCATATGTGGCAAGGTGTGACCAAAAAAACAAAAAAACCAGCTTGTGTTCAAAGTCTATTACAGTGATCCACTTCTTACCTCCAGTTCTTAGAGATACTTTCTTCACTGCATGGGTTCAAAAGTATCTGTTTTTTAAAGCTGTAGCAATTTTGAGGTTAATTTGTAGCAGAATAGGAAATAAAGCACTCAGCTCATCACATTATTTCTAAGTCACTACCTATGTGTAGCCCCTCAGCTCAACCCTGATAAAATAACCAATGTGGTTTCCT TCONS_00126591 TCONS_00126595 . 3' 325 TCONS_00126591 TCONS_00126595 . 3' 1093 EMBV3_12107 TCTGTACCATTCTGTGGTAGAGCCCATGCTGTGGAATCCTTCTGGGACCCCCAAGAGGTA Gene GeneID:615587|LOC615587:NM_001101245:95_cdna Constitutive 0 NULL GeneID:615587 17 GENE LOC615587 NULL hypothetical LOC615587 EMBV3_20948 CTGTGTGGAAGCTCCCCATGAGACTAAAGAAGCCAAAAGAGACATGTGATACCTCTCCTG Gene GeneID:100336777|LOC100336777:XM_002694294:381_cdna Constitutive 1 NULL GeneID:100336777 16 GENE LOC100336777 NULL hypothetical protein LOC100336777 EMBV3_31531 TAGGAGGTTCTTACGGTGCCACCTGCTGGCAAAATGGTGTGGCTCTTCTGTTTGTTTCAG Gene GeneID:617478|C1orf110:NM_001076462:347_cdna Constitutive 1 NULL GeneID:617478 3 GENE C1orf110 NULL chromosome 1 open reading frame 110 ortholog EMBV3_01489 AGCCAGGGGAAAGAAGGTTACGCACCTGGTTGAATGTGTGTTCCAGATAAATCATCCCAG Gene BVT0101_049033 + 0 NULL GK000017.2:18573503-18613424 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06381 ATTAATCCTGCTGATTCTCTGTGTGGTGGGTTGCTCTGGTCAACACTGGTCCTATGGGCT Gene GeneID:768325|GNRH1:NM_001078137:13_cdna Constitutive 0 NULL GeneID:768325 8 GENE GNRH1 MGC152181 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) EMBV3_22736 CCGCAGGTGGCTACCCACCAGGTGCACCAGGCGGCCAACATGTCCGGGACGTTTGGAGGA Variant GeneID:282142|ANXA11:NM_174502:236_cdna 157^275 3 EMBV3_09494 GeneID:282142 28 GENE ANXA11 MGC140235 annexin A11 EMBV3_16100 GCACACAACCTCTTCGAGCTGTTGAATCTTCAGTCCCTCTTCGTGACATCTCAGGGCAGA Gene GeneID:538145|LOC538145:XM_002685748:506_cdna Constitutive 0 NULL GeneID:538145 2 GENE LOC538145 NULL similar to chloride channel EMBV3_31293 GTCGAGAGGATTCAGTGGATAGAGACAGGTGGGTAAATAGAATGGTACTTGACCAGGTGG Gene GeneID:507639|PRPF18:NM_001075323:79_cdna UTR3_Alt 2 NULL GeneID:507639 13 GENE PRPF18 NULL PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) EMBV3_27781 ACCAAATTGCATAAAGAAGAATTATCTGAGCTGAAGTCTCTTCTAGCCCCAGGATTACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42768 GCTCAGTAGCACGGACCCAATAAGTTAACAGCTTTGCTGAAGTTAATACATGAATTACTG Gene BVV0101_022175 - 1 EMBV3_12570 GK000004.2:52222608-52230673 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184048 TCONS_00184049 1 XLOC_111262 Coding TCONS_00184049 XLOC_111262 Coding Coding CAV2 4:52228421-52236084 = TSS137144 2910 1 TCONS_00184049_2 162 0.0584192439862543 3 0.620595144870791 0.000529299680921285 0.000982669440504977 0.000526928010993313 0.000406473448575737 0.000732258292615214 0.00012417114857004 0.000315036556061157 0.000296034317773434 0.000735243660841961 0.000129972902874892 2.31303986645958e-06 3.17936656230737e-05 7.4020582822254e-05 8.48378730190272e-05 0.000212425165167887 0.00101444567605953 0.00139573902922562 0.00274316220666207 0.000354287136990092 0.000466035879554278 0.000111766816276543 0.000645567640202153 0.000642804581197373 0.00112863492214912 2.73680671326815e-06 0.000505673158324665 0.000497434076431244 3.14828477508235e-06 1.38223202253314e-05 1.76563410013751e-07 XM_005205393.1 CAV2 PREDICTED: Bos taurus caveolin 2 (CAV2), transcript variant X1, 0.0 4013 100.00 0.76426116838488 NM_001233.4 CAV2 Homo sapiens caveolin 2 (CAV2), transcript variant 1, mRNA. 0.0 1772 80.60 0.641580756013746 TCONS_00184049_2 sp|Q66WT7|CAV2_BOVIN CAV2_BOVIN Caveolin-2; 4e-116 330 100.00 0.993827160493827 1 coding 0 0 0 0 -0.122489167317397 0.292455950929142 0.010640026750868 0.89981450652684 GTCTCGCGGGCCGGGTAACAGGAGCCAGCAGCGGGAAGCAGCCGCCGCCCGGGCCGCGCTGGGCGAGGCGAGGCGGGGCGGGGCCGGGCACGACGGGAAGGGGAAGCCGCGCGGGCCCGGAGCCGCGCCGCACCAGCCCGGCTGCATCCACCGCTCACCAAGCGCCGCGATGGGGCTGGAGACCGAGAAGGCGGATGTCCAGCTCTTCATGGACGACGACTCCTACAGCCGCCACAGCAGCGTCGATTACGCAGACCCCGACAAGTTCGTGGACCCAGGCAGCGACCGAGATCCCCACAGGCTCAACTCGCATCTCAAGGTGGGATTCGAGGATGTGATTGCAGAGCCAGTGTCTACGCACTCCTTTGACAAAGTGTGGATCTGCAGCCACGCTCTATTTGAAATGAGCAAATATGTGATCTACAAGTTCCTGACGGTGTTCCTGGCTATTCCCTTGGCTTTCGCTGCGGGAATTCTCTTTGCCACCCTCAGCTGTCTGCATATCTGGATTATAATGCCTTTTGTAAAGACCTGCCTAATGGTCCTGCCTTCAGTGCAGACAATATGGAAGAGTGTGACAGATGTTGTCATTGCCCCATTGTGTACGAGCATAGGACGCAGCTTCTCTTCTGTCAGCCTGCAACTGAGCCACGATTGAATACTTGGGCCCCAGGTCCAGAGATCTGGATACTTGTTTTTATAACATAAAAGCACTACTGTTCTGTTAATTCCCCAACTGTTCAAATTAAGAAAGCTATTAAGATGGGCAACCACATGTAGAATGTTTATTGGCAGATCTTTTCAAATAATGCTTTTCTAATTAAAAGCCAAGGATTTCGTATCTAACTTTATAATCAGAATTATTCAGCAGGCAACAATTAATTTTAAAGGCAGGCAGTTTTTTCTTTAGTACAAAGGTATGCATTTTATAATGATGAATCTGTAATGATCAAGGGATATTTCTCTCAAACACTACAATAGTTTTGTGTACAACTGCTCGTAAAAATATGGAATTTCCTATTTTTTTACTCTGGAAGTAATACTTTTTAAAACCTTTGCAGATAAAGTCATGGGGATACTTAGAGATAAGATAATACAAAGATCCTACAAAAGTAATGATAGGGGCTCTCAAATAAATGTGAAAATAGATTCATGAAAACATGTTCCTTTAAATAGGGTATTGTTAACTTACAGGTATATTTAACAAGAGGTTTCAATCTACTGTATATTTTGTAGTTATTGTAAATGTTGCCCTAATCAGATTGTTTTAAAGCACACTTTATATTTGTTATCTTGTACTAATATATAGAAGGAGTAAATGTATCTTCCATAAGGAACTTCATTGGTGAGATTGCACTGTCCAGATTACATAAGCATATGCATCTTCTTTGGTAATTGAATGTAAAAGAGAGATATACAAGGCTTTTCTTTCTTACTCTTCCAAGTGAAATCCTGAAATGTTTCATGGCTAATGTTTATCTGGCTGTGATCTTAATACAAACCTAACTGATATTTCATCTAAGAGATTATTTCTGTCTTGTAGTTAAAAATTAATCCTGTATTCTGCATTCTTATTGTTTCTCTTTACCTTCAAGTAATATTGGTGCTATTAAATAACATTTAAAATAATGGCTATTTCTGATACTTAAGTACAATTTCAGCTACAGTAATTCATGTATTAACTTCAGCAAAGTTGTTAACTTATTGGGTCCGTGCTACTGAGCTATGTATATATAAATTAAAAAGTAATAGCTACAAACTTTCAAGATATTATCTAATATAAGTTTTACTGCACAGTATAAAATTATTCTTATTATTTTTGGACTGTAGAGTCCTATTTCAGTGTTATGAGTCACTGTTGTTTTAAAAATCTCTATTCTAAAATAATAGGCCTACATAAAAGCTGTCTATAATGTGAGTGGTTAACTATAATTTACACACCCTAAAAGTGTGTCAATGCTCAAATTTCAGAATTACTATCAGAACTTAGATTAACATTCCTTTAAATAGTTTCATAGATGACAACTCCTCATTCAGTGACAATTAATTTTATTTTCCCAAGTTTCTAAGACTGGTGAATATAAAGGATGATTGAACTGGAATTCTACTGGGGAACCAAGCAAATGAATGATTAAATTATGAAGCTTATATCCTTTTGAAGGTAGCTACAAAGAGATTTTTTCAAAACTGTCTTAGGTCATTGTAGCATCATTAGAAAACACTCTCATGATCATTACAGCATTATTTCTCATTTGACAATATGGATATTACTATGTTAGTCAAAAAGGTCAATCAGTCTCATGACTTTATAGTTATACCTTATATTTAAGATGTTTTTAAAACATATTTGGATATGTCATTTGAGCAAAAGTATTTGATTAATAAAATATCTATTTAAATAAATCATGGCTTCTATCTTTTCAAATAGCAAGTTTTTTCAAATTGGCAAGTTTTAAAGCCAAAATATACATACATAGTCACATAAAAAAAAACCTATCAACTTGTAACAAGTAGACTATATGATTTTCTTATTTCTGAATAGCATTGATCATCTTCAAAATCACTTTTTATTGAGATTTGTCATTAACTATTTTATTTCAGAGACTGAAATTTTGTACCAAGTGGACCTAGGTTTCATGTACAAATATGTTGGTTCTTTTATTTGTGAGTGGGGAAGAGGTGGGTGATGGTGGGACTTTCCCAGTATCTATAATAAACTTTTTAAAACTTATAAAGTGTGTTTATTGCTTTTATTACATATCAAGTTCATCAATAAAGAACCTTTTCAAACTAATTTTTCCTTATTAAAAACTTATAATAGGTAAACATACATGAGTTATTGCTTATTCTGGAATTTATTTGTAAAAAATTACATGATTGGTAATTTTTTTTATTTTCCCAGCACTTAAG EMBV3_05583 GTGCACGTCAACTCGGAGACACAGCTGAAACAGCACATTAGCAGTAGAAGGCACAAAGAC Gene GeneID:789528|LOC789528:XM_002698760:34_cdna Constitutive 0 NULL GeneID:789528 27 GENE LOC789528 NULL similar to zinc finger protein 385D EMBV3_33380 CCAGCCCATAGGATATTGACTGGGCATGAATGTATAAGCCGTTGTCTTTTATTGTTGGAC Gene BVT0102_050654 + 1 EMBV3_06035 GK000001.2:120315814-120401469 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25411 ATGCCTGGGAAACCTGGTGTTGTTTGTGTGGAAGGCCCACAGAGTGCCTGTGAAGAATTC Gene GeneID:505006|RWDD2B:XM_002684614:90_cdna UTR3_Alt 3 NULL GeneID:505006 1 GENE RWDD2B NULL RWD domain containing 2B EMBV3_19360 GACTATGCACCACCTCGCTGGGCTCGGCAGGTTTGAACAGGCCATCCAGGCAGCCAGCCG Variant GeneID:505847|CDC25B:XM_002692383:290_cdna 420^578 2 EMBV3_06903 GeneID:505847 13 GENE CDC25B NULL cell division cycle 25 homolog B (S. pombe) EMBV3_26265 GTATACACCAACAACATCACCGAAGAACAGTGGCTTGAGGCAGCCTTCCAAGCTCTCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02298 AAGTCCATCCATTCTGTTACACTGGTGAGGCTTCCCCCAGACCTCTTGATGTGCTGAGCA Gene GeneID:538877|LOC538877:XM_002692263:1579_cdna Constitutive 0 NULL GeneID:538877 13 GENE LOC538877 NULL similar to Uncharacterized protein C20orf177 EMBV3_19713 ATTTATCCTTTCAGAAGTGGTGGCTTCACGTCTTCCCTTATTAGGCGGGAGAAGGCAGGC Gene GeneID:509060|SMARCC2:XM_002687420:162_cdna Constitutive 0 NULL GeneID:509060 5 GENE SMARCC2 NULL SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 EMBV3_17360 GACGGCTTCCTGGCCTTCCAAACTAGCCGTTACAAACTCCATTACTACGAGACGCCCACT Gene GeneID:616205|TRAPPC1:NM_001076413:105_cdna Constitutive 0 NULL GeneID:616205 19 GENE TRAPPC1 MGC140540 trafficking protein particle complex 1 EMBV3_22433 AGGTGGCACACAGACGGACCTGTTTACCTGTGGCAAGTGCAGAAAGAAGAACTGCACCTA Gene GeneID:507729|TCEA2:NM_001075329:931_cdna Constitutive 0 NULL GeneID:507729 13 GENE TCEA2 MGC139630 transcription elongation factor A (SII), 2 EMBV3_36938 GAACATCGTGCCTGCCAATATGCCTACAGAGTCATCTATAAGTGTCCAAACGAAACCAAC Gene GeneID:522529|ADSS:NM_001167809:59_cdna UTR3_Alt 3 NULL GeneID:522529 16 GENE ADSS ADSS2 AMPASE2 adenylosuccinate synthase EMBV3_29128 GGAGCCTGTTACAACTGTTAAGAGTCGGGGTATGGCAACTTGTTATTGCACAGAAGTTGC Gene BVV0102_385762 + 1 EMBV3_32909 GK000002.2:127248204-127251764 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35005 GCCTAAAACTCTAAAGCTCCACAACTAGAGAAAGCCCATGTGTGGCAATGAAGACCCACC Gene BVV0101_018727 + 0 NULL GK000030.2:3970604-3997929 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21680 ACTAAACCAGGAGCGGCCGACTTGGACCTTCATGGTCGTTCTGGGGTTGGAGTTTTCCCC Variant GeneID:100316905|LOC100316905:XM_002689763:22_cdna 195^365 9 EMBV3_42968 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_26068 GCTGGCTGGGCGGCTGCCTCCTGATGTCAGTTACAGGAAATTCCAAGATACATGCACGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38429 TCCCACTCAAAACCCCAGGAAGATGCAGGAATGTCTTCTAAACCAGGTGACATGAGCTGG Gene GeneID:514509|AGMAT:XM_002694143:526_cdna UTR3_Alt 2 NULL GeneID:514509 16 GENE AGMAT NULL agmatine ureohydrolase (agmatinase) EMBV3_01029 ACAGCACGTTTATTCTTATGCTGTTAACTCTGCTAAACTACAACTTAGCCATATGAAGCA Gene BVV0101_030339 - 0 NULL GK000008.2:84508201-84513652 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228469 TCONS_00228470 1 XLOC_138501 Coding TCONS_00228470 XLOC_138501 Coding Coding ZNF367 8:84512134-84539536 j TSS170330 4882 1 TCONS_00228470_5 241 0.0202785743547726 4 0.821977300098537 0.000395385275938946 0.000143801544582355 0.000320265658097965 0.000145700800916426 2.71272288236233e-05 1.69990832324456e-05 8.58948070166349e-05 4.51707336624049e-05 0.00021911346324866 8.64899550402523e-05 2.6193994511236e-06 3.80859309202742e-05 1.42141492641946e-05 5.29945949245403e-05 3.59938716650506e-05 0.000151478248321732 1.79356286983541e-11 3.87227246788543e-05 4.65834213892812e-05 0.000279225567810901 3.86355359272503e-06 3.8030004198378e-06 1.42696826286637e-19 4.17514700450182e-12 0.000336443497872958 0.000103784630094549 0.000118484623384054 7.70390745855223e-06 6.3494436848849e-06 4.56782373976375e-05 NR_046265.1 LOC100140121 Bos taurus uncharacterized LOC100140121 (LOC100140121), non-coding 0.0 2019 99.91 0.229619008603032 NM_153695.3 ZNF367 Homo sapiens zinc finger protein 367 (ZNF367), mRNA. 0.0 3000 86.56 0.515567390413765 TCONS_00228470_5 sp|Q0VDT2|ZN367_MOUSE ZN367_MOUSE Zinc finger protein 367; 3e-118 345 85.85 0.87551867219917 3 coding 0 0 0 0 0.00892753139032489 0.95305078796533 -0.00404854259413412 0.93841717393341 GTGGGGGCAGAGAGGGAGAGAATACTCAGCTATCTATTATGTAGGCCTGTTCTAATTACTAATCCTAACTGTTAACTACTGGATATTAATTCATTTATTCAACAAATATTTATTGAAAGTCTAAAACAAGTCAGGCTTGGCCCTGGCAATACAGCAAAGAACAAAACAAGATAGTCACTTCTTTCACGTTCTAGGGAATACCAGGCTGGACATTCCATTTTGCCCCATCCCTTTCTGAGACCCAAAGTGCCCCTGACAGGGGTTGGGCGGGGGGAGGTTGACTGTCAGACTTTTGATTCTTGTCAATCAAGATCCCTTGGGTGCCGAGTGGGGTCTGGAATGACCGGGGCATCCATAGCTCCACACCCTTTCAGATGGGGGATGAAGGGGCGGCCCCAGACTGGGTTTGGATCCGCGGCAGGAGGGCGGGGAGTCCTCTGGCGTCTTTGGGGCATCCGTCCCGAGCGTGAGAATGGACACTCGCCTGTGTTCGTGTCTCTCCGGCGCGAGCAGCACACAGGGAACTCAGAGATGACCTCCTTAACTATCCTACTTAGCACAGATGGGAAACCGACGCCCGAGGAGGCGAAGGCTGTGACTGATGCCCACCTCAGTCTTGGGGCGAGTCGGGGGCGCGGATTGGGTCCACTCAGCGAGTCCAACAGCTGGGCTGACGGGAATCATTAAGAAACTACACACTTCTTGGTATCTACTAGAAACTACAGTAAGAAGGCCTCGGTCCCTCTTGAGCGGGTGGCGGGAGCTGAGAACCGGGAGGGCGGCGCGGGCCCCAGCCCTTTAAATTCGCAGCCGCGCGGGAACTACAGCCCAACAGCCACAGGCGGGTGGGGTGGGCAAACGCAAGCCCCCGCCGGCCAACGACCGCCCCTAGCCCTCCCCGTCACCGAAACCTCTCCAATCAGCAACCCTCTTGTCGCTTGCCCCTGCCCGTCACCCCCACTGGTCGCCAACCTCGACTACCCGCGCAGAGGGACAGCAGGGGCGGGGCTCCCGGAGGGTGTGTCTGGGTGAGTGCCGACGTCGCGCGCTCCCCTGGAGTTTCGAACGCTGTTGGCTCCTCTGGAAGAAAAAAAAAATACAAGAGCGGCGGCCAATAGCATGGCAGAAAGGACCCGCGCGCAGGTCCGGCTCCGCCCCGGTCTGGCTAGAAAGAAGTCCAGGCCCGGCCATTGGCTCGCGCGTCCTGTCACTCGCCGCTGCGGCCAGCGGGCAGGGGCCTTGCGGTGATTGGTTCCGCCCAGGCGCGAAATGTAACGCGGGAAAAACAGGAGTAGGGACCCCGGCGGCAGGTTGTTATTTTCGGGGGCTCGGCGCCTCGCGTCCAGCTTCCCTGTCATCGCAAAGGCAAGCCGCCCGCTGCTTCCTGCAGCTGCAGCCTGCGTTGGAGAGTATAAACAGCGGAGAGCGGGTTTGACCCAAGGGTTGGGGGGCCAGCCCTGACCGTCTGGTCCGGCCGAGCCGTTCTGTTCCTTCACTGGCCGCAGCGCAGGAGAGTTCCAGGAAACGTCCGCCTGCCATGAGCCGGCGGGACTAAGAGCCGGCAAGACTGAGAGCCAGCAACTCGGAGCAGCGCCGGCGAGCGGAGCAAGGACCAGACCCGGGCTCGGGGAGTGCGGCCCACGGCCGCCGGAGCTGCGGATCCGGGCCAGGCAATGATCCGGGGTGTGGAGGCGCAGATGGCGGACAACGCCCCTCAGCCGCCGCCCGTCATCTTCTGCCAGGATTCCCCGAAGCGGGTGCTGGTGTCGGTCATCAGGACGACCCCGATCAAGCCCACATGCGGCGGCGGAGGGGAGCCAGAGCCGCCGCCTCCGCTCATCCCCACCAGCCCTGGCTTCAGCGACTTCATGGTGTACCCGTGGCGCTGGGGCGAGAACGCGCACAACGTGACGCTCAGCCCCGGAGCCTCCGGGGGCGCAGCCTCGGCTGCCTTGCCTGCGGCCGCCGCCACCGCCGAGCACCTGGGGCTTCGCGGACGGGGCGCGCCGCCGCCCACCGTCTCGGCCGCCGCCGCCTCGGGAGGTGAAGACGAGGAGGAGGCGAGCAGCCCGGACAGCGGCCACCTCAAGGATGGAATCCGACGTGGTAGACCCAGAGCAGATACTGTACGGGATTTAATAAATGAAGGAGAGCATTCGTCCAGCAGAATCCGTTGTAACATCTGTAATAGGGTGTTTCCACGGGAGAAATCACTCCAGGCTCACAAAAGGACTCATACAGGTGAGAGACCTTATCTGTGTGACTATCCAGACTGTGGAAAAGCCTTTGTTCAAAGTGGACAGCTCAAAACCCATCAGCGTCTTCACACCGGAGAAAAACCTTTTGTTTGTTCAGAAAACGGTACTGGGAAACACGAGAGCAGCGCACTCCCACCTTGAAAGGAAAGCTGGTTCAGAAGGCTGACCAGGAGCAGCAGGACCCGCTGGAGTATCTCCAGTCTGACGAGGAAGACGACGAGAAGAGTGGTGCGCAGCGGCGGCTCCAGGAGCAGCGGGAGCGCCTGCACGGAGCCCTCGCTCTCATCGAGCTTGCCAACCTGACGGGAGCACCGCTTCGCCAGTAGCCCGAACACTGACTCTTCCACTGTACAAAAGTACTGCCCAGCATACTTAAAAAGTAGATCCTTGGGCATAAGCTAAGCACCTTATTTGCTTATCATAGGCTGCTATTCTGTAGAAATGTATGAAGAATGTCATTGCCCCAGAATATGGGGTGAGAGAGAATTGCACTTTTTTATATGGTAAAAGATTTGTTGTAAAGTTTAAAATATTTTGTAAATATGGGACTTCTAGTACAGGGTAGAAAACTACGTATTGTGGGAGGCTAGATTTTGCAAGTTTAATGCATTCATTGGAAGCAGTTCTCACAGAAAGCACTTTCTGAATAAGACACTTGTATGGGGGAAAAAAAAAAAGCATGGTACATGTAGCCAAAGAAGGTTTAAATAGATTATTTATAAGATCATTTTTAACAATGTATATTAGTATGTTTAATAATACTGTAAACACTGAAGCAAGCAGAAAGTATAAGATGTGAGTAAGGTATGTATTTTAAAATTGCAAAATAGTGTGCCTAATAAGACTAGAGATGGAAAACTGACTTTCAGAAGACTTTCTAACTTTGGGACTTTGGAAGAAAACAGATATTTGAAGATCTTGGTAAGATGAACAGTAGTTAAAAATTTTCAAAATTGTATTGAAATCAGTCTTATTCTCTCTTTCTGAGGTTTTACAACTCACTATGATGTTTAGGTTTGAAAGCACTTGTCATTCCTAGCTTGTTAACTTGGGAACTTTTGCACATTTCATGTTTCTCATTTGCTGAAATCGAATGATTAATCTTGCAAAGTCTAGGTAACTTGGTAATCGGTATTTTAAAAATGTATTATGGGCCCTGTAATGAGATTTGGCACTTGGATTTTTATTAATAAAAGGGACATCTACAGGGTTGTTTTGTAGTGAACCGTTTTAGATCTTTTGTTAGCAAACACTAAATTTAAATGTACTGCTTGTTTAGAATTATTAGCAAATGGAAGCCTCCTATTTATATTTTCAGTGCATAAAGCCACCTTCTTGCTTTACTTCAGAATAACATGCCAAGCTATTTTGTGTTCACTAAATTTAGCTATCAGTTAAACACTGCAGAAAATATTAGCTACTCAAATAAGTAGGCTTCCGGAATAGTTTTAACTGCAAGTGTGTTAACTTGTGTGGTGGTTTTAAATAATTTTTTCCAAAATAGATGAAATTTTTAAACACCACTTTATGTACTGAAGCATGAATAGAAAAATGAAGAGCAGAGTAGTTCACCTCCTTTATGTAGGCATAAACTTCCATCATTTTACCTTGTTTTAAGCAGAAACTAAATAACATGCATAGCATGGTAATTTTATAGATTGCTTAATTGGAGTAAACATCACAATAAGAGAAATAAGGGCTCGTCAGTGCCTTTTTTTCTTTTTTTTGTATTGAAGTAGTAGCCTACAGATGTAGTTTAAACATCTAAAATGTAGGCTTCTTTATCTCAAAATCCCAATGTGTTGCAGTACACAGATAGTTTAAAACATATAGCCATGGGGAAGGGGATGTATGTAAATGTACTGAAATGAGGCAAAAGTGTGAAAGATAATAGTAACAAATAATGTGTATGATGAGGACATACTTTAAAAATGTAATTCCTCTGTACAGTAAATTACAAATCTTAAGGGATTTTTTTTTTTTTTTTGTAATAAGAGAATTTATATTTGTAATGGTCTAAGAATTTTTTTTTTGTAATCTGGTATATAGAATTTTAACTTGGAGCACTTATGAGCACAGACTATAGCATCTGAATTTTCTTGGTTTAGGTTTCAACATTTTTCTCTAGAATTTTTCCTCTCAAATATGACTTAAATGAACTATAAAAAGCTTCATTGGTTTTGGGAAATTTAATGAACTTACCTAAAGAAGGAAATGCAGTAGGAATTTAAAAAATACAAATATTTGCCTGTTCACACATAATAAAATTTAAGGCCTTCAAAAGTAAGAGTTTTTGTTTGTTTCTCCTGTCAGCTTTTGTCAATTATAATAGTTATATTCACAAACATTTTTTATTTGTATAATTGGAAGTTTTAAGAAATTATTACAATTATTTACTATAGAAATATTTAAAATGTTCCTTTTTTGATATAAGCTATATATTTGGAAAAATACATTGGCATCTAAAATTTGAGGTGTGTTAAAAATGTGGTTTACATTCAAATTTTTGAAGTGTTTTATGCTTCATATGGCTAAGTTGTAGTTTGGCAGAGTTAACAGCATAAGAATAAACATGCTGTAATTTTAAAAGTTGCTTTGAATAAAAACTTACTTTAATTTACAGT EMBV3_35722 AGGCTCAGAACTGGGAGAGGGAGAAGAGGAGGTGGGCCTCTCATACTTGATGAAAGAAGA Gene GeneID:507203|ANP32E:NM_001075306:64_cdna Constitutive 0 NULL GeneID:507203 3 GENE ANP32E NULL acidic (leucine-rich) nuclear phosphoprotein 32 family, member E EMBV3_23411 AGAAGCCGTACATGTGTTCCGAGTGCGGGGAGACCTTCAGCGTCAGCTCGCACCTCTTCA Gene GeneID:540379|ZNF697:XM_002686095:80_cdna Constitutive 0 NULL GeneID:540379 3 GENE ZNF697 NULL zinc finger protein 697 EMBV3_07979 ACCTTGCGCCTGCGAAGGTTTGTTCTTTTCAGAGTCCTGTAGAAATCTGCAGGTAGCTGT Gene BVT0101_071941 + 1 EMBV3_41468 GK000030.2:50531697-50551257 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21899 TCTGTTGCCTTTTGCATTTAGGTCAGGTAAGAGATTTCTTTTCATGACTGAAGTTGCCAG Gene GeneID:100298754|LOC100298754:XM_002696448:96_cdna Constitutive 0 NULL GeneID:100298754 20 GENE LOC100298754 NULL similar to dynein, axonemal, heavy chain 5 EMBV3_37101 AGCTTGTGTCAGTCAATTGCTTCTGCATCTGACCTAGTGACGCCCAGACCCCTCTGACTA Gene BVV0101_050688 + 0 NULL GK000006.2:115943191-115980085 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206333 TCONS_00206330 TCONS_00206332 TCONS_00206331 1 XLOC_124890 Coding TCONS_00206330 XLOC_124890 Coding Coding PROM1 6:115979502-116013937 j TSS153860 2479 1 TCONS_00206330_2 355 0.27228721258572 14 0.928413777080792 2.06726650118233e-53 1.06086016869099e-160 4.20759351442025e-62 2.1325998968258e-123 2.95204695366331e-119 1.82030946593534e-52 1.86788819326037e-13 6.80161854965695e-10 1.9751461095695e-07 0 4.50502305556167e-41 0 1.12016129571087e-14 1.7060259462524e-26 1.33012112648143e-23 5.20072579465601e-07 0.00166409496564125 0.00147136029984224 8.3486938579261e-31 1.42707982479559e-16 1.84592684478815e-11 0.000121519839681804 0.000126239415408752 0.000734786544181207 2.2436447461229e-09 3.29873873349260e-11 7.2691141507064e-16 3.11776458763371e-19 7.70099541830882e-06 5.93615731225123e-20 XM_005208336.1 PROM1 PREDICTED: Bos taurus prominin 1 (PROM1), transcript variant X14, 0.0 4415 100.00 0.987091569181121 XM_005248194.1 PROM1 PREDICTED: Homo sapiens prominin 1 (PROM1), transcript variant X1, 0.0 704 73.42 0.481242436466317 TCONS_00206330_2 sp|O43490|PROM1_HUMAN PROM1_HUMAN Prominin-1; 6e-145 436 58.33 0.977464788732394 1 coding 0 0 0 0 -0.0769223978387745 0.611346329657965 0.00506168033854559 0.928485736890414 CAGGACTCTGGTGTTTGATTGCCAAGGGTGGCTGGTTTGCTTGGTCATCTGCTGCTTGCTGACCCTCATCTTGATTTTTTACCTCCTGGGCTTGCTCTGTGGCACGTTGGGCTATGACCAGAAAGCCACCCCAACCAGACGAGGCTGCGTCTCGAACACCGGGGGCCTCCTCCTCATGGTTGGGGTTGGACTCAGTTTCTTCTTTTCTTGGATAATCATGACCATCGTGGTGCTGACTTTTGTCACGGGTGGAAATATGGAAAAACTGGTCTGTGAGCCTTACAGAAACAAAAAGTTATTCCAGGTTTTGGACACTCCATATTTACTAAATGAGGATTGGAAATACTATCTCTCTGGCCTAGTATTTAACAAACCAGATATTAATCTCACTTTTGAACAAGTTTACAGTGACTGCAAAGAAAATAAAGGCCTTTATGCCACACTTAAGCTCGACCACATCTACAATGTCAGTGAACAGCTCAACATTACAAAGCATACTGGAGACATAAATAGTAATTTGGAAAATATGAATATAAGAATTGAGGATATAGAACTGCTGGATAAAACAGGAATGAAAACCCTTATGGATCTCAGATCTTCTGGAATAGACGATATAGACTATGCTGCCTACTTGAACGCGACCGAGAGAAGTCCCACGAGAGTAAATCTTATCTCATTTGCAAATAATCTCCGAAGAAAAGCCAACCAGCTGCCCTCAGGAAACTTGAAAACCAGCTTGAAAAGTCACACAGATACCTTAACAAATATCCATGAGAACCAGGTCGTTCCTCTGCAGAATTCAATGAACGCCATGCACCAGCAAATGAAGGGGCTTCAGTACAGGACCAGTGGACTGAAGGTCAGAGTGTCCACCACCATTTTCTTTTTGAATTCTACCCAGGACTTTCTCACCAGCCAGCTGTCCGAAGTTGTTGTTGAAGAAAGTAAGCAGTTCGGGAATAAGATAATAAGCTACTTTGAACGTTATCTGCAGTGGGTCGAGATGGCCATCACCCAGCAATTTGCAGCCTGCAAACCGGCGGCCACTGCTCTGGATTCGGCTGTTAATGTCTTTCTGTGCAGCTACATCGTCGACCCCCTGAATCTGTTTTGGTTTGGCGTGGGAAAAGCGACCATACTTTTACTTCCTGCTGTCATTTTTGCCGTGAAGCTGGCTAAGTACTTCCGTCGAATGTATTCTGAAGATGTGTATGAGGATGAGCCAGTGAACAAGGCGCTGTAACACATCACACAAACCGGTTGACTTAGAGCAACGTCTTCTCCACTTTAGCGGAGGCCAGAAGCCTGAAACCCACACGTCAGCAGAGCTGGCTCTCCCAGGAAGCCCAAGGAAGAGTGTGTCTCGGCCTCTGTCTTCTCCTGGAGCTTTCCCTTGGTGTGTCTGGGTTCTGTGTCTCTCACCTCCTAAGGACAGCAGTCATCAGATCAGGGCCCTTCCTAGGCAAGAACGACTTCATCTTCATTTGCCCACATCTGCAAACAACCTATTTTCAAGCATTCACTGAGACCAGTGGACATAAGTTGGCGGGGGGTGGGGGCGGGGAAGGGGCTTCCCTGGTGGCTCGGTTGTAAGGGATCCACCTGCTAATGCCGGAGACCCGGGTGGGATCCCTGGTCTGGGTAGATTCCCCTCCATGCCATCCAGCAGCTAAGCCCGTGAGTAACTACTGCTGAGCCTGCGCTCTCGAGCCTGGGAGCTGCAACTACTGAACCCGTGTGCCGAAACTACTGGAGTCCGCTCGCCCTGGAGCCCATGCTCTGCAACAAGAGAAGCCACTGCAGTAAGAGACGTGGGCACCACACCTAGAGAGCAGCCCCGCTCGCCCCAGCTGGAGAAAAGTCCAGGCAGCAGTGAAGACCCAGCACGGCCAAAAAAATAAATCAATAAAATTATTTTTTTAAAAAGGGGGGGTAGGGAGAGGATATTATTCAACTTGCATAGTCGCCCAACATCCGTAGCAAGCAGCCAAAGAGACAGAGAAGTGAACACGAGAGCTGTACCAGACACACAAAAATTAAGGTAAATCACCAAAATCGAGGATGGCAGAAAATAAAAAATGTTATTAGACATGTACAAAACAGTAACTCCTTCCTGTCTTAGTTTTATCTGTAAAGTTTGTCTGTATTTAAGAGCATGTGACTGACAGTGTCAGAGCTTGTGTCAGTCAATTGCTTCTGCATCTGACCTAGTGACGCCCAGACCCCTCTGACTAGCTGGGTTCCTCCGAGGAGAGAGCTTTTTATAACAACTGATCCTTGGGTCCTCCCCAAAGAGATGCTGACGGATGAGGCTTGAGCACGTGGATTTAAAATTTTTGCCTGGTGATTCTGATGTAAAGCCAACGTTGAGATATACAGCCTCTGATTAATTAAATCAGAATTTCTGAGATGTATCCCAGGGAATTCTCAAGTGTAACCTGGGTTGAGAGTTACTAATACAGTTTCTACATGCATTTCA EMBV3_37853 ACCGGGAGTCAGACGAGTTCCCAAGACAAGGCCCTCCAAACCACCACAGCCAGTCGACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39593 GAGACTTGGGGCTCAGAAAGACAACTCCCAAAAACATGTAGGTAAATGGACGCATGGGGC Gene BVT0102_243294 - 1 EMBV3_11792 GK000017.2:2567621-2650459 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25178 TGAGGAGACACCAGGAGAACGTCCACACCGATTCATGAAATATTTGATTGTCAAGAATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06196 TCTGGATGAAGACCCTACCCCAGAAGACACAGGAGCTAATGGAGACCAAGGAGAAGCACA Gene GeneID:505928|CES2:NM_001034260:123_cdna Constitutive 1 NULL GeneID:505928 18 GENE CES2 MGC127393 carboxylesterase 2 (intestine, liver) EMBV3_14861 ACCTCTTCTCCTACATCCGCCAGTGGGATCAGAACGAGCGTTTCCTCGTAGTGCTCAACT Gene GeneID:507107|SLC3A2:NM_001024488:55_cdna Constitutive 0 NULL GeneID:507107 29 GENE SLC3A2 MGC127541 MGC142823 solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 EMBV3_10868 CGATTCATGTTTCCTGCAGTGATTGTTGAGCCCATTCCAGTTGGACAAGCTGCTAAGGAC Gene GeneID:785439|NME5:XM_002689211:119_cdna Constitutive 1 NULL GeneID:785439 7 GENE NME5 NULL non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase) EMBV3_40832 CAGGCGGAATACCTAAGGGGGGCATTAATTGTTTGGCTCCTGCCTGACTGATGACAGTTG Gene BVT0101_041652 + 0 NULL GK000017.2:68597305-69431676 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08944 TGTACCCCCGGAAGAACCTCCAGGCTCCAGTTTACCCAGTGACACTTCAGATGAGATCAT Gene GeneID:787862|FHOD1:XM_002694817:685_cdna Constitutive 0 NULL GeneID:787862 18 GENE FHOD1 NULL formin homology 2 domain containing 1 EMBV3_24087 ATGAGGATCGGCAAATACCAGAAGCCAGTGCTGGCTACCTGTGGTGCGCTTCATCGAGGA Variant GeneID:512478|SEPT1:NM_001098947:302_cdna 230^353 1 EMBV3_22917 GeneID:512478 25 GENE SEPT1 MGC148435 Septin-1 septin 1 EMBV3_10807 TTCCCTTCACACACCATTTTTGTGGGTGTGTATATATCTGACTTGGGGAGAATTGGGGGG Gene GeneID:786732|SPCS2:XM_002693469:67_cdna Constitutive 0 NULL GeneID:786732 15 GENE SPCS2 NULL signal peptidase complex subunit 2 homolog (S. cerevisiae) EMBV3_27488 ACAGCAGAGTGGTCCTTTGGTCCTTCTTTGAAGCTCTTGTTCTAGTTGCCATGACACTGG Gene GeneID:785350|TMED2:XM_002684798:159_cdna Constitutive 0 NULL GeneID:785350 1 GENE TMED2 NULL transmembrane emp24 domain trafficking protein 2 EMBV3_22878 TTTTGGGGACGCCGTCAACAACACAGAGTGGCTCCGGCCATTGGATGTTGAATTTATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07085 GACTAAGATGGTGGAGGAGCATTTCTACTGGTGACAAGAAGTACATCATGGGGCCCAAGC Variant GeneID:783090|LOC783090:XM_002690169:56_cdna 408^631 1 EMBV3_08621 GeneID:783090 9 GENE LOC783090 NULL similar to chromosome 6 open reading frame 168 EMBV3_33332 GGCAGCTCTTCAGCAAGAAAAGCCAGGAAATTCCACAGCAGATGAATGGAAGCGACTGTG Gene GeneID:538091|SENP1:XM_002687313:110_cdna Constitutive 1 NULL GeneID:538091 5 GENE SENP1 NULL SUMO1/sentrin specific peptidase 1 EMBV3_01958 AGTGGGATGAAGGGAAAAGACCCTCCCTGTCCTTCAAGAGCAGCCAAATGAACAAAGCCT Gene BVV0102_053611 + 0 NULL GK000010.2:37885646-37889528 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016886 TCONS_00016887 TCONS_00016885 1 XLOC_008931 Coding TCONS_00016886 XLOC_008931 Coding Coding ZFP106 10:37886354-37942009 j TSS11687 9736 1 TCONS_00016886_11 1903 22 0.825457289682682 0.00285674331566903 0.00134401308380054 0.0020238313242901 0.00242859519660239 0.00205451562618831 0.00133954731436218 0.00102112414521817 0.00132583037989531 0.001542307190625 0.00136582310945757 0.00100438794495702 0.000694240652968083 3.38627152538333e-06 0.00106945008333247 0.000139061679108233 0.0218655793050826 0.0125595952204255 0.0139611204420891 0.000487958209857122 0.00152554185864992 0.000174424870184873 0.00814058679660623 0.00799369251852288 0.0107641626854098 0.000802936693046355 0.00105920974180164 0.0011151044252837 0.00256366306882575 0.00198845510718007 0.00474862076655225 XM_002690810.3 ZNF106 PREDICTED: Bos taurus zinc finger protein 106 (ZNF106), mRNA. 0.0 1.751e+04 100.00 0.997124075595727 XM_005254591.1 ZNF106 PREDICTED: Homo sapiens zinc finger protein 106 (ZNF106), 0.0 8713 86.91 0.737263763352506 TCONS_00016886_11 sp|Q9H2Y7|ZN106_HUMAN ZN106_HUMAN Zinc finger protein 106; 0.0 3239 87.91 0.979506043089858 0 coding 0 0 0 0 -0.209579495578172 0.23723987370285 -0.0271047671134502 0.65956495391804 GTGCGCCTGCGCTCTGGCGGCGGCGGCGGCGGAGGTTCCCGGTGGGGAGCGGGTTCGGAGCGGGGCGCCGGACCCAAAGCTGAAGGGGGTGGCTGGGGCGTGAATGAGGTCCCTCGCCGGCGCCTCGGCGGCCTGATGGAGTAAGAGGGGTCGGCTGTGAGTGTGTGACGTTGAGTGCTTCAGATCTGGTCACTATGGTACGAGAACGAAAATGCATATTGTGCCACATTGTGTACAGCTCAAAAAAGGAGATGGATGAACACATGCGGAGCATGTTGCATCACAGGGAACTTGAGAACCTGAAGGGCAGGGACAGTAGTCATGAGTGCCGAGTGTGCGGGGTTACAGAAGTAGGTCTTTCTGCATATGCAAAGCACATTTCTGGCCAGTTGCACAAAGATAATGTTGACGCCCAGGAAAGAGAAGATGATGGAAAGGAAGAAGAAGAGGAAGATTATTTTGACAAGGAACTCATTCAGTTAATAAAACAAAGGAAAGAACAAAGTCGAAAAGATGAACCTTCCAATAGCAGCCAAGAAATAAACTCTGATGACAGGCGACCCCAATGGAGACGAGAAGACCGAATCCCTTACCAAGACAGAGAGAGCTACAGCCAGCCAGCATGGCATCATCGTGGACCTCCTCAGTGGGACAGGAAGTGGGAGAAAGATGGCTATAGTAACACTAGGAAAAACAGCTTCACACATTCTTCAAGGAATAATGGTGGATCAAGAGGATGTTCTGGGTGGCATAATGGTGGTGCAGGAGGTCCCTCACCTTGGTTTCACAACCATAGTAATTCTGGAGGTGGTTGGCATTCAAACAGTGGGACAGTAGATTGGAATCATAATGGTACAGGAAGGAATTCCAGTTGGCATTCTGAAGGAGCAGGTGGCTTTTCCAGTTGGCATATGAACAGCAGTAACGGAAATTGGAAATCCAGTGCACGTGGTACAAATAGTTGGAATTACAGTGGCCCCGGAGACAAATTTCAACCGGGCAGAAACAGAAATTCTAACTGTCAAATGGAAGACATGAATATGCTATGGAATACGAAATCTAAGTCAAACAAATACAATCAAGACAGGTATAAGTGGCAGTGGCAAGAAAATGACAAAGTTGGTGCGGTTGCCACATACAGAGGTCCTTCTGAAGGATTTGCAAGTGGTAAGTTTCATTCAGAAGGCTTGCTTGACTTCAATTTTGAGCAGCTAGAAAGCCAAACCACTAAACAAACAGACACCTTCACTTCCAAAATTGGTGGGAAGAGTGGCAGTGTAGCAAGGGAAAAGCTCCATCGCTGGACTCCTTACCCTTCACAGAAGACTCTGGATTTACAATCAGGAATGAAAGAAGTCACTGGTAACAAGTCAGAAATGATAGATAAGCCTCTCTTTGATTTTAGCTTGATAACCACGGGAATAAAAGAGCCCCCAAATGATAAAACAAATAATTCTCAAAAACTGAAAACAAAAAAGGAAAAACATATTGAATCTCTTAAACACAAAGCCTCTTCTGACTGCACTGCTTCTTATGAGGTAGTGAGAGAATGCCCCATTACAGAAAAACCTGAACAAGAGCCTAATTTAAATAAGATGCCATCATTAAAATCCCCATTCCTTCCAACTCCAGGCAGCAAATCAGTTCCTCAAAAGCAAGATTCAAAGAATCCCTCAAAAAACACCAAAATTAATTCTTTTTTCTCTGGGGAACACTCAAATCCTTTGGCTAAACACACTGTGGAAGATAATCAGAGTTCTTGCATATCCAAAATGCGAAGTTCAGGTCCTCATGTTTTAAAAGGAAATAATAAAAGTTCACTTGGAACTCAAAGGGATTCTGATGAAAATTTAAGTGATACATTACAGAAAGCCAAAGATGTGCTGCAGTGTCATGAGACATTGCAAAATCCACTTAGCACTTCTAAAAGGACCAGGAATTATGCAAAAGCAAGTAGAAATGTAGAAGAGTCTGAAAAAGGATCTTTGAAGATTGAATTTCAAGTACAGACATTAGAAGATGAAAGTGATGGAGAGATATCTGACACAGAAAAGCATGAGACAAAAATCGAAACCCTGGGTTCGACAACTACAGAAGTTTTATCCTGCAGTACTCCTGCTGCTGATGAGAAAAGGGGGGATGACCAAAACCTGGAAACATCTAGAAAACCATCCACTTCCCCATGTAACTCAGCAGTTCACCAAAAAGAAACTGAGTTACAAATGACATCTGTAGCCAGCCCACAGTCTGGTTTACTGCTAGATTTGAAAACCTCTCTAGAAGATGCACAGGTTGATGACCCTGTTAAATCTCATGAATCTTACGAAACTGAAGGCTTTGAGAGTACTAGCTTGGATGCCGAGCTTCAAAAAAGTGATATAGGTCAACCCTCAGGCCCCCTCCTGCCTGAACTAAGCAAGCTTGGCTTTCCTGCCTCACTCCAGAGAGATCTAACCCGGCACATTAGCTTGAAGAGCAAAACTGGAGCACACCTTCCTGAGCCAAACCTCAATAGTGCTCGCCGCATCCGCAATATCAGTGGTCATCGAAAGAGTGAGACAGAGAAGGAATCTGGGCTCAAGCCAACCCTTCGACAGATTCTAAATGCATCTCGAAGAAATGTCAACTGGGAACAGGTCATTCAGCAAGTAACCAAGAAAAAGCAAGAGCTAGGCAAAGGCTTACCCAGGTTTGGCATAGAAATGGTGCCTCTGGTTCAAAATGAGCAAGAGGTCTTGGATCTGGATGGTGAACCTGATCTGTCTGATCTAGAAGGATTCCAGTGGGAAGGTGTTTCCATTTCTTCATCCCCTGGGTTGGCAAGGAAGCGAAGCCTTTCAGAGAGCAGTGTGATCATGGACAGGGCTCCGTCTGTATATAGCTTCTTCAGTGAGGAAGGCACAGGCAAAGAAAATGAGCCCCAGCAGATTTTTTCACCTAATAATTCATTCAGATCCGCACAGAGTCAAAAACCAACCATGAGCCTTAAGCAGGAAGTGACACCTCTGGCTGCCTCCCTAAGAACAGATGAAAGAACTGAAAATGTTGCTGCTCGAAGGCGACATAGCGCACAATTATCTCCTGACCGTACAATACCTTTGATGCATTTGACAAAAGAGCTGCACAGCCAGGAGAGCTCTACACTACTTTCAGAGAATCATAATGCCCAGGAAAGTAATGGAGAAGGAAACTCTTTATCATCAAATGCATCCTCAGCCCTTGCAAACTCCAGTTTGGCAGATGCAGCCACAGATAGTAGCTGTACCTCTGGTGCTGAACAGAATGATGGCCAGAATGTTAGAAAGAAACGAAGAGCCACTGGAGATGGATCTTCTCCTGAACTGCCAAGTCTTGAGAGAAAAAATAAAAGAAGGAAAATTAAAGGAAAGAAAGAACGTTCTCAGGTTGACCAGCTGCTGAATATTTCTTTAAGAGAGGAAGAACTAAGCAAATCATTGCAGTGCATGGATAACAATCTTCTACAAGCTCGTGCAGCACTTCAGACAGCTTATGTTGAAGTTCAAAGGCTACTTATGCTTAAGCAGCAGATAACTATGGAAATGAGTGCCCTGAGGACTCATAGAATACAGATTCTACAGGGATTACAAGAAACATATGAACCTTCTGAACATCCAGACCAGGTTCCCTCTAGCCTTACACGAGAACAGAAGAATGTTAGATCTCAAACATCTACTGATGTCACACTTCTGCCTAGTCCTTTTTTCCCGAATTTCCTGGAACCTCCATCTTCCCACGTGTCTCCATCACCCGCTGGAACCCCTCTCCAAGCAATCACATCTTCTTTCCAAGCTCATGGCAGTGTTCCTGCTCCAGACTCATCTGTTCAGATTAAACAAGAACCCATGTCTCCTGAACAAGAAGAGACTGTCAATGCCATATCACAAGGCTCTGCTTGCAGTGTGTCCAAGGAATTACTGCAAGCTAATAGAGAGATCAGTGACAGTTGTCCAGTTTATCCAGTTACCACTGCAGCATTGTCCTTATCAGGACTAACAGAGAGATTCCATGAGCCTAGCCAAGAACTGAAGTTTTCTGTGGAGCAAGGAATTACCAGAAACAGAGGGAACAATCCCTCTTCCCAATCAGCTGGTCTTCCTAGCATAGATAAAGAAAGTGAAGAGCCAAACAAAGGCAACAGTGGGTCTGAAGCCTGTACCAGTTCTTTTCCAAGATTATCCTTTGCTTCAGAAACCCCTTTAGAGAAAGAGCCCCACTCTCCAGCTGACCAGCCAGAACAACAGGCAGAGTCCACTCTGACATCAGCTGAAGCTAGGGGGAACAAGAAAAAGAAGAAACTTAGGAAGAAGAAAACTCTGCGGGCTGCCCATGTTCCTGAGAACAGTGACACTGAACAGGATGTATTTACTGCTAAACCTGTAAGGAAAGTAAAAACTGGAAAGTCTGCTAAAGGGGGGAAAGTGACAACCTCCACCTGGGAAGATAGCAGAACTGGCCCAGAACAAGAAAGTGTCAGAGATGAACCAGATAGTGACTCGTCTCTTGAAGTCCTAGAACTTCCTAATCCTCAGTTAGAAGTGGTAGCCATTGATTCTTCTGAATCTGGAGAAGAGAAACCAGATAGCCCATCTAAAAAGGATATTTGGAACTCCACAGAGCAAAATTCATTAGAAACTTCTCGCTCTGGTTGTGACGAAGTTAGCTCTACCAGTGAGATTGGCACTCGCTATAAAGATGGCATCCCTGTAAGTGTGGCAGAAACTCAGACTGTGATCTCCTCCATAAAAGGATCAAAGAACTCTTCAGAAATATCTTCAGAGCCAGGAGATGACGATGAGCCCACAGAAGGGAGCTTTGAGGGGCACCAAGCTGCAGTGAATGCAATTCAGATATTTGGGAATTTACTGTATACCTGTTCAGCAGATAAAACTGTCCGAGCTTATAATCTCGTGAGTCGAAAGTGCATTGGTGTCTTTGAGGGCCATACCTCCAAAGTGAACTGCCTCCTGGTTACTCAGACCTCTGGGAAGAATGCTGCCCTTTACACTGGTTCCAGTGATCATACCATTCGCTGCTATAATGTTAAGACTCGACACTGTGTGGAGCAGTTACAGCTGGAAGACCGGGTTCTCTGCCTCCACAGTAGGTGGCGAATTCTCTATGCAGGACTGGCAAATGGCACTGTGGTCACCTTCAACATAAAGAACAACAAACGACTTGAAATCTTTGAATGCCATGGCCCTCGGGCTGTCAGCTGTCTTGCCACAGCTCAGGAAGGTGCCCGAAAGTTGCTGGTTGTGGGTTCTTATGACTGTACCATTAGCGTACGCGATGCACGGAATGGATTGCTCCTTAGAACTCTGGAGGGCCACAGCAAAACCATCCTCTGCATGAAGGTGGTGAATGACCTTGTGTTCAGTGGCTCCAGTGATCAGTCAGTCCATGCTCACAACATTCATACTGGTGAGCTTGTCCGGATCTATAAAGGTCATAATCACGCAGTGACTGTGGTGAATATCCTAGGGAAAGTGATGGTGACTGCTTGCCTGGATAAATTTGTTCGTGTCTATGAGTTACAGTCACATGATCGATTGCAAGTTTATGGAGGACACAAAGACATGATTATGTGTATGACCATCCATAAAAGTATGATTTATACTGGCTGTTATGATGGCAGTATTCAGGCCGTGAGGCTAAATCTGATGCAGAATTACCGCTGCTGGTGGCATGGCTGCTCTCTGATATTTGGTGTTGTAGATCATTTAAAACAACATTTGCTGACTGACCATACAAATCCAAACTTTCAAACTCTGAAATGTCGCTGGAAGAACTGTGATGCTTTTTTTACTGCTAAGAAAGGATCCAAACAGGATGCTGCAGGACACATTGAACACCACGCTGAGGATGACAGCAAAATTGATTCATGAAGTTTTTTGCCTCCCATGTTGGGAAGTCTTTAGTTGAACTAATCTCATATCAGCCCCTTGCACAGGCCAATGTCCTCCTTTCTCCAGTGAATCAGGGAAGGAGAAAGTGGTTACTAGCCAGGCTTACTACTAGCATAAGTCTGGGCAGCTCTATGGGATGACAGGTTACACTTCTAAATTTTTGCTGGAGGTTTGTCAGATTTAAACAGATTTTTAAGGAGCTATACTCTTCTGGGACAGCATGGCATATAGTAATTTATGCTACTGGTGTTCTCCAGATGTTTATTAAAGACACAGATCTTAATTGGTTACCCAGTTTGACCCTAATCACACATGTATTTTATTGATTTCAGTTTGTGATTTTTAGTTTCTGTTCTTATGATGATTTAAACCGATAGTCACGTGTTTAAGTTCAAATTTGTTCAAATGTTAGGTTTTTAGGATCAGACTTAATTTCTCCTTAATTATTGCAATCAGTTAATTCTAACCACTGGGTAATTTAATTGGAAGCAAATATTTTCTTTTCTTAACAATTATGTACAATGTTTCAATATTCTCTTCTTAGATGGACAGAGCAGCCTTTAAATGCTAAAGGGACACACAGTAGATTTTTAACAGCTGGAGTAGCTGCTCTGCTGATTATATTTTAGGAGCTCAGGCAGCAGATCACATAATGACAAATCCTTGCACACAATAATTCCTATTGAACCTCCGCAGACTTTGACAAAGTCCTCGGTTCAAGGCAATGCACAGACCTACCATCTACTTGGAGATCTCACTGTTAGACCTGGGTACTCCCTGCAGGTATTGGCAGGCTGTTCAAACTGGACGTGTGCCTTTGTCTTTCCAGGTTCTGACCCTCCAAACGGGCAGTGGGTTTGAAACCTTTTAGTTTGCTTCATTGCCAACCCCTCTCCCATTCTCTGATTGTGCCTAGACTGACAGCAGCCGTCATATAGTTCCTCTGGGCTCATGAGGTACTTTTTACCGACCCACAGTACACAAATGGGGGGAATCAGGATAAAGCATCTGAATATAGTTTTTAAGGCCTCAAGCAAACTTCTTAAAGACCAGTGTATTGCCTTCACCTCCCCCACTAAGCTGAGAAGGAAGGGTGGAGTGGGATGAAGGGAAAAGACCCTCCCTGTCCTTCAAGAGCAGCCAAATGAACAAAGCCTTGACACTGCTTTGTTTTTAAATTCTCTCTGGATTCTTAAGTGAAGCCATAGCGGTGTTACTTTCTAGCTTTTTGTTTCTGTGATCGTCAAAACTCTAAAAGATTCTACAGAGAGAGGGAGGAAAGGAGAGAGGAGCCGAGTGCCACATACCGAACTCCGGATGTGATGCCCACTCTTTCCTAGAGGAGAGCAGCCAGGTTTATCTCCACCCACCTTAGTGTACACAATTCTTCTCCCATGTCTTCACTCAGGCTTTAGGGCAGGGGAACTTCACCTGGGGTTCATGGATAGGTTTCATGAGGGTATCCAAAACCCCTGGAATTGAGTATAAGACTAAGTAGCTGTTCTTTTTTTCCAGGAAAGCCTCTGGTGGTTTTTATTAGATCCAAAAAAAAAAAAAAGAACTAAGCTGGGAGATACATCTAGATAATGAATGGCCCCATGAATTATTTACTTCTGTCCTTATGAACGCCAGGACTCTTGTGTTGACCACATTACTGAGATTTGCATGATATTTGAGAGAGCAGAGAAGATCTTGTTGCATAAAGTTTATGTGTGCTGTTTCTGTCTGAGAACAAGCATTCCCTTCTCTTACCCCATTTCCTGTACACGTGACCAGAGAAGCCAAGCTGTTCTGTGGGTTTGGGAATGGTGATTCCTAGCAAAGTACATTTGGATTTATTGCTAAACCTGGCGTTTTCCTTAGGACTGTAGTGAACCCACATTCCTACATTGGCTGAGCAGTGTGCTGAGAAAGTCTTGCATGCTCTGTCACATAGGTGCCCTTCTGTTCTGCCTGAGGACATGTCTGAAAAGATGGGAGTGGTGGAGCTTATGTACAGCAGGAAGGGGATATGTGAGGTGTTGGGCAGTTGTGGGGAACTGTTGTAGGTATGAACAGATTGATAGAATCAGTAAAAACTGATTTGAGCTTAACTTTGATAGAATCATGCACAGTCTATCTGCCTTTATGTATGCAGTTATGGATGTTTCTTGTACGTGTGTATGCGTGTGGGCACCTATACTTAATAATACTTCTCCCCATTTCACAGGAATTTTCTCTGAAGCCATAGCAATAATGTCTTTGTTTCAAGAATGTGTAAAACTCACTTAACACCAGGTTAGTGTACTGCCCTAAATGCACTGTTGTAGCCATCTGTTTAGAAATAAAGGCACCATAAGCATCTTGGCTGCTTATGGTTGTGTGTTATTACTTTTAAGTGTCTTCAAAGTTATGCAGAAGTCTTTTTTTTAAGTCTTCTATAATGTCTTGGCTGATTCTGGCCTTCTCTTCCCTCTCAGATTAGAGCAGTGGTTCAGGGCTTTGTGTTTGCTCTGATATTTCACACTTAGTAGAGGAAGGAAATTGTTACATGATGTGACAAAAACACAACTCATTTCTTCTAAGGAATCGAATGTTATTTTTAATTACTTGTGTTTACTTCTGACAACAGAAGCCAAGAAAACCATAGCATAAATCCTTTTGTGTGTATATGCTAGTGTTTTAATGGCAGTTTGTTCTGATGAAATATCAGTGACTTCAAGTTTTATCATGAAGTTTTTAATCAGGTTCAAAATTTTGGCGTGCGACTCTACTCAATATAAAGCAGTTAAACACAATGCAAACAAAGGGTTATCTTGACCTGATGTTACTTGAATTTGAGAGAACGTCATTATTACTACACTCCTGCTTTCGTGGAGAATTTTTTTTTCTGCCTCAGAAGTTGAGTGTTTAGCTCCTGAACTACCTATAATTTGTAGGCAACATTATTGCTATTTAAGTGATTATTTGCCTAACGAAGGGTTTTTTGTTTTTCTCTTTTTGGTAGATTATACAGTGGTCAACTTTAGTGACTAGGAATGTGGATGATTTGGTGGGAGTAGGTGTACAATACTTAGCGGAATGGTAATGGTATATTTTATGGAAGAGTTCCATTTGAGGGGAAATCAAACTATATTGTGAAGTGGGATTTAAGTAGCACGCCCTCTCAGGTTTGCCGTTCATATACGCTGACTTATAAATTTTGTACCTGTTACCTAAAGGAGAGCGCCTAAAAACTGTTAAGGCCATGCCTGCCACATTGTTACAACAGTGATTTTTATCCCAGCCGCAAATCCTCAGGATCTTGAGGATTTCAGAGATGCTGTCTGAGGGTCAGAAACAAGCTGTGGTATAGGTGGTTTGGGTTATACTGAGTTCCATACATCAGTGGATGTGAAATCTTGATTAAACCAAACCTACTACTAATCAGACAGTAACCACTAACCTCACTTCCAACCCCCAACTATGTGGCCTTGCTGGGTCACCTGGTGACTAACATTTCCCAGATTTCTTCTGAATTCACAGTTGAATTAGCCCAGTTGAATTGGGGGAGAAGGAAGCAAGGAGGAAAGGCTGTTGAGGACCTTTTCTCCTGCTTCAGAGAAGTACATGCCCTCGAGCTGCGCCAGTGCCCTTGGTGTCTTGATTTTTTTTTTTAATTGAATATGGATTAGAAGACTGAAATCAGATGACATTTGACTGCAAAATGTTTATAAGCAAATAGTTTAGCCTTCTTACATTTTGGTATAAAGCTGTGAACTTCCTAACTTTGTAAAGCAACATATAAAGCAAATATAAGAGGAAAATAAAGTACTTTTACTAATTGTTTA EMBV3_41507 CAGCCTCCCCAGAGACTGTTCTTGGTTTTGAACCTGACTGGCGGCTGTGCAACCAAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37504 GAGACGCGGCAGGCAGCCGCGCTGTGCGTGGAGCGCATCCGTCTCATCCTCAATCTTCCC Gene GeneID:286879|LIPE:NM_001080220:77_cdna Constitutive 0 NULL GeneID:286879 18 GENE LIPE hsl lipase, hormone-sensitive EMBV3_22073 AACGCAGCACACAGGACTGGAAGCTGCACATGCCTCTCCTTTCCAAGTTGTACAGAATCA Gene GeneID:528153|RUFY1:XM_002688485:58_cdna Constitutive 2 NULL GeneID:528153 7 GENE RUFY1 NULL RUN and FYVE domain containing 1 EMBV3_23212 CGACGGTCTCCTCGTCTTCTTTTGCGTCCCTCCCCCTCTTAAAACACTTTAAACTCAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37901 AAAGGAGAAGTTTTTGGACTTCCTGCCGGTTAAGAGCTTAGAGCAAGAGGGGTTCCCACG Gene BVT0102_111931 + 0 NULL GK000020.2:17610174-17831024 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114723 TCONS_00114711 TCONS_00114714 TCONS_00114720 TCONS_00114724 TCONS_00114716 TCONS_00114721 TCONS_00114719 TCONS_00114713 1 XLOC_069331 NonCoding TCONS_00114723 XLOC_069331 NonCoding NonCoding - 20:17802629-17808693 - TSS85479 2183 2 TCONS_00114723_3 132 0.350435180943656 2 0.640277090549233 0.00106545063261849 0.000910901810320618 0.000494529912864523 0.000694059872434719 0.000277065370094639 9.90684967414813e-05 0.00115686468737673 4.9280513368183e-05 0.000154467083861164 2.26173786065196e-05 2.15365531821395e-06 7.8621539732912e-05 5.23973746263757e-05 0.000110997972167408 0.00012438441665137 0 0 0 1.19590275751802e-24 0.000381597985524391 6.89814163586714e-05 0 0 0 0.00047946181710005 0.000847361871215976 0.000914089854474822 4.39679135821074e-06 0 0 XR_232768.1 LOC101906873 PREDICTED: Bos taurus uncharacterized LOC101906873 (LOC101906873), 1e-09 69.8 72.31 0.0586349060925332 0 noncoding GTCCCCACGTGCTCCTGGACAGGCTGTGGGAGGGGCTACTGTGTAGGGATCTCCTGGCGGAGGGGGCGGAGTTCCCTGCGGCTGGAGACCGGTGCTCTGCTGAGGCTCCAGGCAGCGTCTCCGCACACAGCGGCCACCACCATCCTAGACTGAGTGTGGTGAGCAGTGCTTCTCCAAACGGCCTGGAGCTGAGACGTCAGTACTAGGGGCTCTGGCCCCCGGTGCTTGGGGCAAAGCGTCTACAGGCAGCCCTCTGTGAGCAAGTGAAAGGGACTGAACACAAAGGACTAAAGAAAGCCAAAAAGGAGAAGTTTTTGGACTTCCTGCTGGTTAAGAGCTTAGAGCAAGAGGGGTTCCCACGGGCACTCACCGGATCACCAGGGCAGCTGGAAAGCTGTGGTGATACCTAGAGGTGAGCCCATGGAGCCCCAGCCAATGAAGACTCAGCCACGGTTCGCCTCATCAGCAGTGCGGGGAGGAGAGCCTGGCGGGGAAGTGTTTCCTCTTCTTGTCAGCAGCCCACAGGGCTTCCTGATTATGGGGGTCCTGGTCTTGCGAGTGGCTCACAGCGCTCCCTGGCCCACTTGAGAGAAACTAGCTCTGGCAGGAAGAGGTCAAGTCACCAGTCACTTACTCACCTGAACCGGGATGGGGCATCCTTGTTCCAGCTTGTCAGGTGGTCCTCATTACCTGGGCCTTTTCCTGGTATCACCTCTTGGCTCACTGGACTGGCCACTTTCCTTTACCAGATCAAAAGTGACTCGGGAGAATGCTTCTGCTGACCCCCAGAGATTGGCAAGGACAAAAACCCCAATGCTGCCACTACTCCCTTGTACAGGGGCCAGGAGGACAGTACTGCTGGTGAGACAGTGGGCAAGACAGCTGTGGCTCCATCCTGTCGGAGATCCCCACCATCCCCAGGCCCCAGCGCTGCTGGAAGGCCAGCCAGAGGCAGCAGACAGACGCGTGTGAGTCTGTCTGTGATCCCCAGGGATGCCTCAGAATGATTCCCTTAAGAGAGGGGGTCCAGATGATGCTGGTGGCTATGTTGTGTGGTGCACCACACTGGGTATTGGCTTACTGGGCAGAGCTGCTCTAAGTTTGGCCAGAGGCTGCTGCCATTCCACCCTGTCAGAGAGTACTCAAAGATCAGAGTCCTCGTGTGAAGCTCCCAAAGCTTCCACCATCCTCCCGCTGAAGCCAGGGGAGCAAGAAAACCATGGTCTGTTTCTCCATGGTCACCAGAGTTTGTTACCAACCCTTTTGAGTCAGGCCCCAGGCAAGGTCCTCCTGCTTGTTGTCATTCAGGCCAATAGAATGAGATTGAGTTTGGTTCAGAGGAAAGTTTTACTCCTTGATCAAAGAATGGAGAGGTGTGAGGTACAGTTCTAAAGTACACCTTCTCTGAAACAAGCCATTGGTGAGCTGCTTTGTAGGGCTCTCTGTGGAGGGGGTGGGGTGGGGGTGGAGTCTTCGAGGCTCAGGGGCAGTCGTGTTGCTTACGCAACTCCAGATGGAAGTGGCGGGTGCAGCATTTCTGCACGTGAAACATCAAGATAGGGTGTCAGGCGCAGCGCCTCTGCGCTGAGAACGCTAATCGGACACGTGAAGTGCAAGTCCTCTGTAAACGGCACCTTGTAGGCAAGTGAAACCAGACTAAGCACAAAACGAGAGGTTAGACCTTATCACCTAAACCCCATCTTACCTTTCCTGGGGCCCCCAGTGGCTTTTATAGGGGACATCTTCTTGGAACCTTGCTTGATCAGTCTTCCTTGTCATATATGCTGATAGCTTCCTTCCTTTTGCTACATTGTACCTGCCTGTGCTTCCATATTTGTATGATTATTCAGACAATGGCTGTGTTGTCTGCTTAGACTACAAAACTCCCAAGGGCAAGGACCGAGACTGTTCTACTCATCATTATATCCTCGGAAGTAGCACAGAGCAGAGTAGATAATAGATGCTCATTAAGTCTTTAATAAATGACGAGTGAAAGGATGAATGAATGGGAATCTCAGCAGTCTCCAGTCAGTCTCCCTGATCTCAGACTTGGCTCCTGTAGATCATTTTAAAATTTTCTTACCAACTATAGGTTCTGTTAATCCTTCAGGCAATAGGAAGAAATTAAACCTCTTAGCTTGGTCCTTCAGAATCTAGTTCCAGTTTGTCCATTTCCACTCCTG TCONS_00114726 s 3' 26510 TCONS_00114726 s 3' 22332 EMBV3_09859 CCTCGACAATGTTGGCGGATCTACTGAAACGTGGGCTCTAAAGTTCCTCAAGAAGTGGTC Gene GeneID:506626|RTN4IP1:NM_001075275:18_cdna Constitutive 0 NULL GeneID:506626 9 GENE RTN4IP1 MGC143304 reticulon 4 interacting protein 1 EMBV3_20163 ACGACACGGTCCAGAGTCTCCTCTCGGGCACCTCATCCTCTGACTGTGCAGAATTTGCAA Gene GeneID:508744|PCSK4:XM_002689176:229_cdna Constitutive 0 NULL GeneID:508744 7 GENE PCSK4 NULL proprotein convertase subtilisin/kexin type 4 EMBV3_23008 TGGATACCGCCTGTCTAAACCACTTCACGCGTTAGTATTTATTTACCAGTCCTGAAGACT Variant GeneID:514142|HUS1:NM_001079592:40_cdna 188^600 1 EMBV3_05662 GeneID:514142 4 GENE HUS1 NULL HUS1 checkpoint homolog (S. pombe) EMBV3_38504 GGCAGTGACCAAACCAGGATTAGGAAACGTCAGGGCCTTCTCTACCTTCTCAGATCTAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36034 AGCCACCAATTCATACATCGGGACTTGGCTGCTCGGAACTGCTTGGTAGACAGTGATCTC Gene GeneID:531514|BMX:XM_002700401:78_cdna Constitutive 0 NULL GeneID:531514 X GENE BMX NULL BMX non-receptor tyrosine kinase EMBV3_34302 CCCAAGCTGGCCAAAGTTCTTTTTATGCTTCGTGCCATTCTCACTCCTATGATGACCCCC Gene GeneID:789022|LOC789022:XM_002689095:14_cdna Constitutive 0 NULL GeneID:789022 7 GENE LOC789022 NULL similar to olfactory receptor EMBV3_09284 AACGTGTTGCTAGTCGTGAGCGACTCCTTCCAATGTGGAGTGGGCTCTTCACTCACTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37959 TTTGGGAGCGCACCACATCCACCATTTCCATGGCAGCAGCAAGCATCATTCAGTGCCTAT Gene GeneID:781054|NRXN1:NM_001109805:191_cdna UTR3_Alt 2 NULL GeneID:781054 11 GENE NRXN1 NULL neurexin 1 EMBV3_00032 GACGGAACGGTGACTCTGGAGTACAGGGTGGTTTGACAGGGGAGCTTAAAGCTATTAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27963 AAGCTATTTGCACTCACGGCATCAGCCTGTGACATTTCTTCCCTGTCCTTTAATCCCCGG Gene BVV0102_105653 + 0 NULL GK000007.2:64684501-64703773 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213938 TCONS_00213941 TCONS_00213939 TCONS_00213937 TCONS_00213943 1 XLOC_130580 Coding TCONS_00213937 XLOC_130580 NonCoding Coding SLC36A1 7:64561727-64689216 o TSS160148 4927 2 TCONS_00213937_5 113 0.065354170895068 2 0.96136891315261 0.000849487100246962 0.000939868287772192 0.000487109264663317 6.68512087272602e-24 2.93128076809092e-05 2.89803721615059e-06 0.000464206145012805 0.000818088780093737 0.000902590978786741 6.18440573872942e-49 0.000105920584694134 7.45478133656505e-06 6.29717982508621e-05 5.38265388816801e-11 1.04653921594609e-08 0.00162061089571644 0.0012669491482417 0.00187043414958449 0.000583311213635478 0.000571173305534318 0.000457307025724503 0.000326859754812723 0.00104114670991293 0.000451828011613654 0.000772217084118033 0.000707895438666879 0.000199424386627101 0.000243624509852803 0.000289114638570833 3.08481406766542e-05 XM_005209640.1 SLC36A1 PREDICTED: Bos taurus solute carrier family 36 (proton/amino acid symporter), member 1 (SLC36A1), transcript variant X1, mRNA. 0.0 7721 100.00 0.868682768418916 XM_005268386.1 SLC36A1 PREDICTED: Homo sapiens solute carrier family 36 (proton/amino acid symporter), member 1 (SLC36A1), transcript variant X1, mRNA. 0.0 1460 68.10 0.868276841891618 0 noncoding 0 0 0 0 -0.0473815251312568 0.813431812498814 -0.0860099535092099 0.0979348913129207 TGCATCCTGGGTTTCGTGGGCTTTGTGGTAGGGACGTGTCTGACCCTGTATGAGCTGATCCAGCCAAGCAGCGCTCCCATCTTCATCAACTCCACCAGTGCCTTTGTATAGCAGGCTGGGTGCGTCCCTGCACCAGCCCACTCCACCCTGTGTGTTCCCCCAGCACCTGGCTCCAGAGCCTCAGGCAGGGTCCAGACTCTGGGGGAAGGTAAGGTCGCTGTCTGGGAACCCCTACCTGGCTCCTAGGTACCCTGGGTCAGGTAGGGATGAAGACAGGGTAGGGCGTGGGCAGCAGATTCGCTGCTGCATGGGAGGTACCTCTAGCGGCAGCGCCATCTCTGTTTATTTGTACTTATTTTAACCCAGAACTTTTCACCTCTTTTCCCTGATCCCACCTCCTCCCTTCACTGCCTGCCTTTCTCCTTCTGACCCACCTCTCCAAATTATCCCTGTTGCACAATTCACTTTATCTAAACATTTCAGTGTCTGTCACCTCATGTTTTCTCCTTGCCCGGGCCAAGCCTAGATGAAATAATGTGGGCATGCCCCTCTTTATCAAGCCAAGCCCACCTCTTAGCTCTCTCCCAAATATTTTACCTCAGTATTCTCCTGCCTATTCAAGTCTCCGCCCAGTAGTGGAGCCTACCTAGTAGTTGAAAACCAGCCCCCAAAGCTAGAGGTTTTGGCCTTTCTCTGGCTTGCCGTGACCCTTGGCAACACCACCTCCTCTCCGGTTTCCTCGCATGGGTCACGATACTGTTATCTTAGTTGCTCGAAGTGCTGAAAGATATCAAGTGCTGCCAAAATTGAAAATATTTATATTTTATTTAAAACCAGCTTTTGTTTTTAGATTCTGTCTCTAGATCTGGGCCTATTTGCAACTTTTTCCTTCCTCAGTAAACTCTCACTCAACTCCTCCCTCTGAGAGGAAACTGAGTCCAGGAGGTGTCTACGGAGGCCCTCAGCACCCTTGGCCGAGGACCCCAGAGCTTTTAGTCAGGACCATCGAAGTGCGGACCTCTGTGGGGAGTCACGGACCTTGCCTCCCGTCAACCAACCTGATTTCCTCCTGAGAAGGCAGGAAGGACTCAGGAGATGTTGCACGAAGCGGAGGGGAAGAATGGCGACGTGGGGTTGGTTTCTCTCCATAGGAGGCTTAGACAACAGCCGCTTTGTGCATTCAGACCTGTTCCCCACCTCAGCTCCTGACGGACAGACGGCACGGCAGCGTCCAGGAGGACACCCCGACTCTTGCTGTGAACGAGAAGCTGAGGCCAGTGTGAAGGGCAGTTCCCAGAGTTTGCAGCAGCTGGTCCGACACTACATGTGGTGCTCGGTTGTTTACAAGCCCTGGAGGACAGGGCGGGTGGGCAAAGTACCCAGCCCCAAGCTGCCTCCAGGATCTGGACTTCTAACGGAACCACTTGGTTGGGACTTCGGTCTCCTGTGTTCTGAACACTAATCGTGCCCTTGTCCCTCTACCCCCAACCCCGCATGCCTCCCTGGGTATCAGAAAAGAGGCAGCCTCAGGGCTGACTCACCTCAAGGTCAACCATCAGGTGTGGGGACAAACTGCAGAGAAGGCTTGGAAATGTCCATTGCACTGTCGGCTGCCTCTTCCCTCTTGGTGTGACAGGTATCACAGAAGGCTGTTCACTGAATCTCCGTCTCTTGAGTTGTGTATGTGTGTGTGTGCACGCACATGCTCCTGTGTAGGTAACAGGGTCGTGCTGTCCTCCACCCCTGCCAGCCTCTTACCTGAAAGTGGGGAGAGCAGCACTCCTTTATCAGGGGTTTACTTTTTGTGTTTCACCAAAGCTCTTGGGGGCTGGGACCCACCCTCACAGCCCCAGCTTTTTTCTTTCTCTTCTGTTCCAAAGCCAGACTCTCTCATTCAGTGACACCTGACCTACTTAATCATTTGTTCACTTAGGAAGATGCAGTCAGTTTTGATCTGGTCTCCCTTAGGAAAGTGAACACTTTCCCCCATTCTTTCGGCTCTTTGGTGGTCACTCACAGGTGCTCATGTGACCAGGGTTCTAACTGGAGGTAGCAGTGGCCCTGCCCTCTGGAGCCTCAAGCTTTCTGAGTAACTTCTGGTTACCAAAGTGTAACTTCAAGAACCTTTAGCTCCCATTTGCAAGCCCAGGCTCCAGCAGTCTTTCCAGAGCGGTCCTGAGTATTTGTTTCCATCGAGAAGGTGTGGGCCACTATTAAGGGCTCAGACATGTGTCCCACCCACAGCTTCCACGGTGGAGGCTTCTGTGTGCTCAGGGCACAGCTAGAGGCAGTCCTGTCCAGGCGGCTCTTGAGACCCAGTCTGGGATGCTGGGACCTGACAACTGGACAGCACGATCCTGAGGTCTTTTGGCCCCATGTCTATTGCTTCAGGGCCCCTGCCCAGGGAACCTGGTATGTAGGAGAGACTGCTGCAGCCTTGGGGCTTCAGGAAACTAGCTTGGCCTGGCCTTGCCCTGTTCGATAGCTTCCTGTGCTTTTTCTTCTCGGGCAGCCTGATCACATGGCTGCTTCAGGAGACCCAGGCAAGGTGGATGCCATGGGGACCTTCCTGCTTGTGCAGTTGCACAGCAGTCAGTTGTCGAGTAAAGGGTTGGCCAGATGGTTTAGTGGAAGAAGCCCTTCCTTTTACAGAAGCAGCTGGCGAGCCCAGCTCAGGGAAGCTTAGTCTGCTGCCCACAGGGCTTCTCAGTCAGGGCTCCCTCCCTGCTTCCTTCGCAGCCTCTCCCTGGGCCCTGCTTTAGTCTCTGGTGAAGAAGCCCCAGCATAAGTAGGAGACCAATCAGGGAACAAAAGAGCAAAGGCTTGCAGGGATGTGGGGCCACATCTTTCTGACCAAAGGTAAACGATAGGGCTTTCTGGCCCAGTGCTGTTCACTCTGTGTCCTTCTCCAGCCTCCCCAGGGCGGCCCCAGGTTCCATCAGCCCAGAGGTAGCTTCTCAGAGCCCCTTGTTCCTTCCTGCAGACGCCACTATCAGGAGCAGGTTTCCAACTCCCTGCAGGCAGTATACCTCTCCTTAAATGCAGGTTCTTGCTGGGAACAGCGTGACCTGGCATCCTCTCGTCACTTTTTCTAGAAGTTGTACCATTCACAAGTGGCATTATTTATATTTATGTTGTGCTGCTAAGAGCCCTTCATGTGCACAGACCCTGGCCAGATGGATGTGACTGTGTGGTGTGTCTTAGCCTAGAACCTGCAGCTTAACTCCTCTGTCAGTCACCTTTCCAGTCAGATTTACTGGCTGATAATGCTCACCGTTTACCCTCTACCCCCACGAAAGGCAAACTTTGCAGTTTGCAAAGTTGTCTTAAAGTGATGATCTCCAAACAGGTATGTTAGGAAAATCTTTTCCCCCTCCTTGTTCTCCTGCCTGGCTTTTTTTCCCCTCAAATCTCTCCCTTCCTAAATTGTAGAACATCATCTCTGTTTAACACTACATGTTTGCCTCATGTGTTTTGGAAGTGCAGAATCTCAATTTATGTCTGTTTACAGCTCTCTTTATTCACTACTCACTGCAAGGGAGTCTGTATCAGTTTGTTTTATTTCATGGCTGATTGGATGTTCAGGTGAGCCCTGGCATCTACCTAGCTCAGAACACAAAGCTGCTTCTTGGTGGAAATAAAATTAAAAAGGCTTGACTTGATGTACAGGAGTCGGCTCCAAGTCTGCCTTAGAATTTAATTTTCCAAGGTACATTACGCATCTCCAAGACCATTAAGAGGAAAGGAAAGAGTACGGTTTATATTGAAATCATGGTTAATACTTTTAGACAGTCCTGCTAGTTGCAAAGCTATTTGCACTCACGGCATCAGCCTGTGACATTTCTTCCCTGTCCTTTAATCCCCGGGTCTTTCTCTGGCCAGGGGACATAAATGGTGCTGAGCTGAGGTTACCAGAGTCGCGGTCGGGAGTAATGGTGAAGTTGCCTGCTGTCAGCCATGTTCTTTTGTTTCAATCAAGGTGATGCTGTGGAAGTGGTTTTGTTTTACTGAAATTTACTGAACAATAAAATATGTGACTCTGTTGTAAACCATGTTAGTGGATGTGTGACCAAGAGGAAAATGAAAAACTGCCATCCAGCGGGTCTTGATAACTAGACAGTCCCGTGTATGTCATGTGCCTGTGTGCATGTGTACGTTCTGAATGGTACGTGTAGAAATGCGGGTCATGCAGGGACTCATGAAGATTTTGTTTTGGGTTCTGCACACGGATCATGTGTTAAACTTTTCCTTAATAAATGAGCTTTATTTTTTATTTTTGAGAGCTTGGAGTCTGTGTCTTCGTTTTCTCTCTGTCTCTTTTTTTTCCCCCGATCACTCAGATCCCTTTACTGGATCTTAGGTCAAAATGTTTCTAGGTTTATGTCACAGAACTCATCTAGGGGAGTAGTGTGAACAGCAGACCCACCTATGGATGGAGAGTCCCTGAGAAAGGGCAGGTAGTTACTTTTCTGTTAGACAATCCTGCTCTTCCTAAGTCTACTCCTGCTTCTCTTGAAAGCTTGCGTAGGAATTCTTAGCCCCCTCTGTGCATGTCAGAGGACCACCCAGGACAGGCGTGATGGTTTTCAGTGTCAAGGTGGTTGGGCGATTGTATTGAATAACCCAGTTATTCAGTTAAACACTAACCTAGGTGTTGCCGTGAAGGCATTTTGTAGTTGTGGTTAATGTCCACAGTCAGTTGCTTTTAAATAAAAAGATAATCCCCAAAATGTGTGTGGGCTTCATCCAATCAGCTGAACAGCCTCAAGAGCGTAATGGAGGTTGTTTCACTGAGAAAGAAAAAATTTTGCCTCAAGACTACAGCATTGACTCCTGCCCAAGAGTTTCTAATCACCAGCTGGCCATGTACATTCTGAACTTGCCAGCCTGCACGATCACACATGTTCTTGAAATGCCCGTCTGTGTG TCONS_00217481 TCONS_00213943 r 5' 0 TCONS_00217481 TCONS_00213943 r 5' 0 EMBV3_23093 CTCCGAAGCTTTTTGGAGACTGGGAAGCCCAACTGCGGAGGATAATGAAACTCATCGCTG Gene GeneID:533538|SGMS1:XM_002698368:152_cdna UTR3_Alt 4 NULL GeneID:533538 26 GENE SGMS1 NULL sphingomyelin synthase 1 EMBV3_16968 GTCAAGTGCTGGGAAAACTACCCACATCAGGACTTCAAGGAGCAGGTGATTCATCACTTC Variant GeneID:505233|LASS4:NM_001015520:27_cdna 649^741 1 EMBV3_40178 GeneID:505233 7 GENE LASS4 MGC143234 LAG1 homolog, ceramide synthase 4 EMBV3_36271 AGGACATGCCACTTCCAGTTTCCTTCTGGGTGACACGTGCTGGCCTTAGATTCCAGGATC Gene BVV0102_036281 + 0 NULL GK000008.2:40878300-40956461 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225069 TCONS_00225074 TCONS_00225076 TCONS_00225072 TCONS_00225064 TCONS_00225071 TCONS_00225067 TCONS_00225065 TCONS_00225061 TCONS_00225062 TCONS_00225075 TCONS_00225066 1 XLOC_137681 Coding TCONS_00225072 XLOC_137681 Coding Coding GLIS3 8:40719451-40955664 j TSS168607 5348 3 TCONS_00225072_3 141 0.0121540762902019 8 0.977393189169051 0.000960099130194971 0.000306523389465449 1.28278231912132e-15 0.000838123344059089 0.000355619373571999 0.000107951339089144 3.00741996213413e-13 8.62185878497325e-29 8.96181556219888e-12 1.54475148680185e-23 1.43846129360625e-10 1.20414789021635e-16 5.62056514218956e-35 1.23146517278113e-06 9.10026053974979e-56 6.03322339849985e-30 2.26534146430177e-34 7.81569515985731e-14 4.91773496168106e-25 9.18673996561331e-05 4.75686613618126e-12 2.11408732462948e-56 6.58914547724471e-21 9.6386668358908e-22 0.00052582469763847 0.000248676215864944 0.000354130959234787 2.28849122888462e-10 3.60810453671097e-139 6.5486002001146e-34 XM_002689612.2 GLIS3 PREDICTED: Bos taurus GLIS family zinc finger 3 (GLIS3), mRNA. 0.0 9548 100.00 0.989715781600598 NM_152629.3 GLIS3 Homo sapiens GLIS family zinc finger 3 (GLIS3), transcript variant 0.0 1716 82.99 0.30964846671653 TCONS_00225072_3 sp|Q6XP49|GLIS3_MOUSE GLIS3_MOUSE Zinc finger protein GLIS3; 2e-79 253 86.62 0.99290780141844 0 coding 0 0 1 1 0.041929476051741 0.693462992806629 0.00355538131084264 0.960356826112529 AAGCATTTGGGTCGAGTATAAGAAGAGTGGTGTGGAAGGTAAAACAGCAAGGGAGTTTGAAGGTTGCAAGAAGGCCTTTTCGAGGCTCGAAAATCTCAAGATTCATTTGCGGAGCCACACAGGCGAGAAGCCGTATTTGTGCCAGCATCCGGGCTGTCAGAAGGCCTTCAGTAACTCCAGTGACCGCGCCAAGCACCAGAGGACACATCTGGACACTAAACCTTATGCTTGTCAAATTCCGGGATGCACCAAACGCTACACAGACCCAAGTTCCTTAAGAAAGCATGTGAAGGCACATTCTTCCAAAGATCAGCAAGCAAGGAAAAAGCTGCGGTCCAGTGCAGAGCTCCATTCCGACCTGCTCACAGACTGCCTCACGGTGCAGCCCCTGCAGCCCTCCACCTCCCCAAGAGACGCTGTCGATAGGGCGGTGGGATGCTCCCCAGAGCCCGGGCCTGACCTCTATCCAGCTTCCATTTTCTCCAGCAATCACTCAAGCCGAAGTGGAACAGCTGCTGGGGCCGTGCCACCCCCACATCCTGTCAGTCACCCTTCTCCGGGACATACTGTACAGGGGAGCCCCCACAACCCCTCCTCCCAGTTACCTCCACTCGCAGCTGTGGACGCCGGAGCTGAGAGGTTTGCACCTTCTGCTCCATCTCCTCACCACATTAGCCCCCGGAGAGTTCCAGCTCCTTCTTCAATAATGCAGAGAACACAGCCTCCCCATACCCAGCAGCCCTCAGGATCACACCTGAAGTCTTATCAGCCAGAAACAAGCTCTTTTCAACCAAATGGAATCCATGTCCATGGATTTTATGGGCAACTACAGACATTCTGCCCCCCGAATTACCCTGATTCTCAAAGAACCATGCCACCTAGCAGTTCCTGCAGTGTGATGCCTTCCTTCGAGGACTGTGTGGTCCCCACATCCATGGGCCAATCTGGCTTTGATGTTTTCCACAGAGCCTTCTCAACTCACTCGGGCATTACAGTGTATGATTTGCCTTCGGGTTCCTCAAGCCTCTTTGGGGAGACTCTTCGCAGTGGACCTGAAGATGCCACATTCTTACAGATCAGTGCTGTGGACCGCTGTCCTAGCCAGCTCTCCTCTGTCTATACTGAAGGCTAAAATCCACCCCCAGCCTCCACTGGTGCTGGCGTCCAGAATCTTTTTGTTCCTTGTCACTTTTTGTTCTTATAGTTTCGCAGACCCTAAGAAAAAGAATGTCAAGCAAATCAACTCAATACGCCACATCACAGATGTGTCTTTGGAGAGCAGGGCTGGATGGTCAGAGCTGGGCTTTGTAGGTGTGTTTGCAGCTGCTCCTTTTTCCCTCTGGATTTGCCAGTGACCAGCAGGACTGTCTTTTCAAAGGGAATTCGGAGTCTCACTGCTAGATATCTGTTACTTCCCAACTGTCAACCTTCAAGGGACACCAGTGAGACGATGTGCATGTGAAAATGTAATTTGGAGATCACCCTTGCTGAAAACTCCAAATAAGGATGGACAACCCAGATTGCCAGCACAGTGAATCTCCTCACCCAAGAGCCAGGTGCAACAAGGGAAATCCACATCCAAGCCCAGCATGGGCTCGGCTCTTGGAGGAGCCTCGGTTTCCCAGCACCAGCCTGGCACCCAGGGAGCTGGCTGCTTCTCTCCTCCTGGGTACTCCCATGATAACCAATTGCTTTTCAGTGTTTTTCCAAAAGCAAAATGAGAAGGTTCTGTCAAGCACAGCCCCCTGAAAAGCTTGACAACTTGTTTTGTATTCCTGCAACCTACCCTAGTCCTTTGATTTTAAAGGCTTGTTATTTACATGTACTTTTAAAGGAAAAAAATATTTAGAGGTCTGTTCTTTGGATGGAAATAATTATTTTAATCACCCCAGCTACATACGTCTGGCCTCTGCTGTGGCTTGGCTTGGCCCCGCCTAGTAGCTCCTGTGTGCACCAGGAATGTTCTGCAAAGGCTGCCTGAGGGACATGGCGTTGGCCACCCCCTTCCCAGTGCTACCACAGAGACCCTCGTGTGTTGACTGTTCAGTGACTCCACCTTGAGGACTTTATTCAAAGGAAAATTTCTCTTGACTGGTTCACCCATGGCCTCCGCTCTGGTGCTCTGCCCAGAGCCTGCTAGAAGCTGTGAGAGCAGGGACACGTGGAGGTGTGCTCCTGGGTTCTCTCAGAAAACCAAACTGGAAGAGCCCCATGTCCAGCTCCTTTGCACAGCCTCTGCTGCCTCTGTTAGGGTCTCCCCTCACCAGTCTCTCTGTTGCTCCCTTGCCTTTCTCCTCCCTCTTCATTGCTCTCATCTTTTTATTTTGACTGTAGTTCAGACATACCCACCACCTGCCATTGCCTGCCCACCAGCTCTGAGCAGGGTCTGGCCTGCTCAGGTAGAGGAGGTAGTTCTGGAGGCCTGCTCAGGGCAGGTAGAGGAGATAGTTCTGGAAAGGTGGCCAAAAAGAAGCAACTGCTTTGTCTGAAACTCTGTTTTGAGAGCCTAGAATTTTCACAGAGCTCTTGGCCATTTGATCTCAAACCTGAGTAGGAAGTCATTTTCTGTGACACCTTTTTGTTGCTGTTGTTTTGTCGCTAAGTCGTGCCCGACTCCTTGTGGCCCCATGGACTATAGCCCTGAAGGCTCCTCTGTCTTCTGTGACACCTTTACCAAGCAATTAAAAAGGTCCCAAGTCCAATGACATAGGCTATAAAAATTGCCAAATCCCCCAAAACCTGGTAAATTCTGACACCCCAGTACTATCACATCTCATGATTTCTTTTCTCTCTCTTCAAAAATGTTCTCTGAAGAAAAATGAAACAATGCTATTTGTCAAACTGGGATAATTACAATCTCCAACAACACAATTAAACAGCTTGATGTCAGACTTAGGATCTGGTGACAGTTTGTATCCTGACAGACGTGTCCTTCCAGTCTGCTGCACAGTCGGTAGTGTTCTGCCTGATTCAGGACTTCATTCTCACATGCAGTATAATCAGGCTAATAAAGAACCAAGTGCAGGGTCCATTTCTACAGTGCTCTCAGGCAATCTCATTTCTCTGGCTAGTGGGCTCTGATCTGAGAAGAGCCATCATGCAGACATCTGTGTCTGACAAAGAGACAAGTTATTCACTTTACAAAAATCTGCTCTGCTTTACGAAAGGACGCACGTCAGACTTTTCTTTCCAAGTGAGCTTTCAAACACACACAGAGTCCCACCCTTCTGGCAGACTTAGTGGATTGTGTCACCTGGCCTAAACAGGGACCATGTCCTTTGCCTCACACTGCAGAGAAGGGGAAGCTCTGGTATCATAGACAATCTATTCATTCTAAATCCCAGAGCCTCTACAGGGAACTCAAAACACATTTCATCCATGTGATGAGGAAAAAGATGGAAAGGTAAGGCTACTGCAGCTGGTGTTGTCAGCCTACTTGTGGCTTCTGGCTATAATCTGCCGTGGAAACAGGGAAGGAGGACAAAGCCAGAAGAACCCAGATACTCTGGCTGGAGGAGATGCTCCTGAGCATCTGTAGTCTCCCCGTTGGCCTCACTGAGGCCCAAGGGAGCCCGGGGGTGCCAGGCAGCAGCCGCACCTGCAGGGCCTCCTTCCCTGGCAGGAATTAGCAGAAGCAGGCCCAGGACCACCTGCAAGGCCAAGCGCCCCTCCTACTCCCTCCCCCATCTCGTGTTTCCCCTTGGCTACAGGTTTGAGCTCAGGACCCCAGGACATGCCACTTCCAGTTTCCTTCTGGGTGACACGTGCTGGCCTTAGATTCCAGGATCTCACCTGACCTTAAAATTTGTTCCTTGCTTGCTTTCACATTACATAGATTTATATATGTTTTCATCATTATGTTTGTAACAGTAAAAGTGGAAACTTCAAAAGATAATTCCCTTCCATTTTCTGGTCTTTTTACTCTTGATATATAACCATTTTCATAAACATCTGAACAGAGATTGTCATTCCCCTTTAAAAAAAAAAAAAGAAGCTGATGTTCGTGAAAATACACACAGCCCAAAGCCAATTATCCTATTACATTAAAAAAAAAAAAAAAATCAGCATGCCTAGAGATATTTTACTTGCTGCATTGTCTTAATTCCCTAAAGGGACTGCATCAAAATGTAAGTTGTAATTTAGCCTCTGATATTAGTGTTAAATATTCTATTCCTGTAAGATGTCTCGCATTACCCGTGTCACCCCCCAAATTATTTAGGTGATTCTAAAATGGACAAAAGGTCATCAGTCAATCACAGCAAAGTTTCCACTGATGAGCCAGAGCTTTGGTGTTACTCTTGTTTTTAAATTAGCAGCTGTCAAGCATATTAGCATACTAGAACAGAGGTAAGTGTCCAACCCCATCTTCAAGAATCTTGCTTCCCAGTTGCCTTGAATTTTGGGAATAGTGATTATAAATGTCCAATTTAATTATTTGGTATTTTATTTGACTGTTTTGACCACTTCATTTTAAAGCAGCATTTTTAACAGCACTTTTTGTTGGTGGTGTGGAATTTCTGCGGTTACTTTTTTTTCTTTGCAATGAGTAAAGCAAAAAAAAAAAAAAAAACACATTGGAGAGATGGCAAGTGTAAAAAGGAGGAGATTTATTTTGTACAGACAGCAGAGCATCCTGTGTAATGTTGCTGACATAAAGCACTTTGGGGGAAAAAGTGGAAATCTGTTTTCCATAAATCACACAGACTCTTGTACATAGTTATATACACTCACGTAGAGAAATGAACTGCATATATCATACTGGATATGGGGCTGATTTTACTCTAGGGGCACATCTGGTGCTTATTGTCATAAATCTTTTAAAGAATTAGGTACACTTTTTTCTATTAATATGTATAGTTTTGTGATTTGTCACAGTTATGTTTCATATAATCATAAGTTATTTTGTCTCGTTTCATGAAGTCCTTTTTTTATGTCAAAAGTAAAATGAAGGGATTGTGCACTTGGTACATAATAAAACTGGAAATAGAGGATGCGCCCACCTGCCTGAAATCCTCCTTCGGCATGTTGTTTTAAAACACAATGGCAGCAACCATTTTTTGTTTGTTTGTTTGTTTTATTTTGTTTAGTTTTTACCATCCGCTTCCCTCGTATTGGGTCGGTAATTATAATTAAAAGCAGATGGGGATGGGGGAGGGAGTGTCCAAGGCCAGCTTTAGAATGCCGCATCGCTTTGGGCCAGAGCTGCAGCCTGGATTTAATTATAGATATGAGGACGAAATGGCAGTAAAAATGAATGTGTCTCTGAATCCTTTACATGTTGGGAGTGTCCATAAATAAAACATGAAGTTTTATTTCATCAGATTTAATTAAAGCTTTTATACATGTTT EMBV3_25099 CCGAAATCGACTCTGTCCCACTGATGACAGCACCAAGTCTGGAGATTCAGCCGTAGAAAA Gene GeneID:616181|UPF3B:NM_001076411:29_cdna Constitutive 2 NULL GeneID:616181 X GENE UPF3B MGC134301 UPF3 regulator of nonsense transcripts homolog B (yeast) EMBV3_28471 CCATGACCACTCCATCCTGACACCATCTACCCAGAGGCAGCATCAGATTCCACAGGTTAA Gene BVT0101_022652 + 0 NULL GK000009.2:60280370-60555708 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237446 TCONS_00237442 1 XLOC_144721 NonCoding TCONS_00237446 XLOC_144721 NonCoding NonCoding - 9:60490948-60555499 - TSS177509 6022 3 TCONS_00237446_12 79 0.315177681833278 3 0.906754453911696 0.00185219650339032 0.00122979531189228 0.0010649879941063 0.00123300214991604 0.00150884835010394 0.000420121650206336 0.000660939301503487 0.000967461628646996 0.00200989849816251 0.000340313361734918 8.23218996835015e-14 9.92257461930742e-09 0.000115221891454207 0.0002925291782545 0.000520874088233647 0.000380336033352375 3.53695830010648e-05 8.32267747940051e-08 0.00134411778732091 0.00092270965587594 0.000771983161339647 2.45487528755847e-05 0.000269343111609294 0.000122128266635522 0.00127765500750269 0.000724242754664827 0.00134882480344658 4.50011559023709e-05 3.81374072601933e-05 4.2630338403069e-05 XR_235861.1 LOC101902479 PREDICTED: Bos taurus uncharacterized LOC101902479 (LOC101902479), 8e-176 623 100.00 0.0571238791099303 NM_017856.2 GEMIN8 Homo sapiens gem (nuclear organelle) associated protein 8 (GEMIN8), 2e-13 84.2 72.67 0.0259050149452009 0 noncoding 1 1 0 0 0.101670626555369 0.529521681520758 -0.0899328441732959 0.113196209669973 TGAGAGGCTAGTTTGGACCTGAGGGACAAATTTCGCGAGACCTTTATTAAGGGCCTACAGCAAAGTGATGATACCGCGAGAGCTGACGTGTGACGTAATTAAAACGCGCGAACGGAAGTGGCGCAGGGCACGATGGAATCACAGTACGGTTGGTCCTTTAGGAACCAGCGGGAAAGATAAAAGCTACAGTTTCAACCTTGTTTGGTGAACTACTACTCCTAAGAGAATGAAGTTGGCCTAGTTGAATTTGATGGGGTTGACTATTATGTGACCAAGAAGAACATAATAAATCATGGCATTTGAAGAACATCCTGAGTTCAAAGATTCTTCTCTTCCAGACTAATGCTGATCAGAGCTGCATGCCATGAGGACTTAGTGATAAAACCACACTGGCCTGGCTGCTTCAGAGTGTTATCTGTGAAGAGAGGCGGTGGCCCAGGTGGATGCTCTGGTTATCGGCTTACATCCACATGCCTTTTACTTGGGCCCTAAGTCCATTCACTTTCTGTAGCGGTTTCATGAGATTCGTCCTGGAGCTGTCGCGATCTCAGAGCTATCATAGTGGCATCACTGTTGAACATGAACACATATTGACAATAGCCTTAACTTCTCTTCTTCCTTAAAGAAACTTCTAAACCACGGCACTACGCTGCATCTATGTGGATAGAGACCAAAATGTGAGTTTCCCTTGGTGACGATAGGATAAATGTGTACTTTGTCTCACTTTTCAATTAGGGTGATTGTGTGATGACTCTATCCTTAGTGCATTTATACATTGTTATCCTGGGACTACATCTTCCTCATCATATTAGAACTTTCTGCTCTGAAGGCTGAGGAGTGTGCAATGGCCTGTGGGCTCAGTGTTGGATATTTTAAGTATGGCAGAGCCAGAGGAGGTGTGCTGAGTGACTGAAGATCTCTACGTTAGGCCCTGTGTGGAAGCTCTTTGTGTAAGTCTACACTCTCTGCCTCAGATTCCTCTTTCTCTTGTGTGTGTGGGGAGAACCTAAAAATAGTGCTTGAAAGGGTTGCCAAGATCTTAGCTTTGTGTTGGAGAAACCGTCCACTAATCTTATTGCCTGAAACCAGAGTCAAAGAAGGTGCTCTGAAATGAAGGTTCAGAAGAAGAACAAACATTTCCACATTGATTTCCAGCAAAGCATCCAGCCTTCTACCTGGTTACTGAGGAGGTGAGGCAGATGAGAACGCACCTGCGGCTCAGGGCCAGGGCGGGCGCGTGCCTCCCAGCTCTGGGTCCCTGTGGTGTATGCCATGTTTGATGTGTAACTAACCCATCTCAGCCTCAGGTTTTAGGTATAGCAAGTGGAGGAGAGCTCTGCTATGTTGCAGATGATAGGAAGTATTTTTAAATTTAATAAATGCATGGTATGATTATTCCTTTTTAGAACCACAGACAGAAGCCTACAGGGCTCACGGTTCTGCAGCTGGTGCAGTAACTTCCTCCTCGGCTGGCTTTCTCTCCTCTTCCTCCACCCCAGGGACCTGTTGTGGCTCTCTCCTCTAGTGCAGAGTTAAGACCGTCAGGGGAATACCAGTTAATTGCTGAGTAGCTAATCAGCATTGTAAAGGTCAGTGATAACAGGCAACAACTTACTCATGTTCACAAACAGCAGGATGTGACAAAAACAATTTACCTTGATAAATGTACTTCAGAAATCTACTGAGCTTACACTGTCTCCCTCGGGCTCTGTCTGTCCATCTTCATTGGCCCCTCTCGGTTTCTGCTTCTGCCCCCTCTTTGGGTCTTGTTTCTAGGTATTCCATGTTGCTATCTGGTCCCCTTTGAAGGGTTTCTGCATTCATTTCTGCTGTCTGGGGGTTTTCCCATACTACCCCAGTATCGGATGCCAGCTGACTGTTCTGCCATGACCACTCCATCCTGACACCATCTACCCAGAGGCAGCATCAGATTCCACAGGTTAAGGGCTCAATCTTGCGAGACTACCCTCTGCTTCAGATGTCAGTCAAAAGCTCAGGCTGTCACTTGTGCCTCTGACCCACACAGAGATCAGAGGTTCCAGCCACCCCCAGAAATCAGAAACATTTTACCCACTAGATCACCAGATTACCAGTATTGGGCCCCTTTGAGCTTCGCTCTTGGCTTGTACATGGGGCAGAACGACTCACCACAGCTGCCTGTGCCCCTGGTGGCCACACTGACCCCTGTGCGGGATCAGACTCCTCGTGCCCTGAAGTCCATGAGCCCTCTTGTCCGCATTCCCAGTGGCTGATGCCCCACTTCGTCCTCCTCTAAAATGGGGAGAACGTCCCAGTGCCACCTTTCGCTCCAGGACTGAAGCAACTTTCTTACTGGCCTGCATCAGACAGTCCCAGAAGGAAACAGAGGGTCCAATGGAAAGGGCTTTTGGGGAGAGTTTGAAGGAGGAATTCTTTTCACAGGTGTTGTTAGTTATTAATGCTTCACAAACTTTTTTGTTGCCTTATTAATAATAATGCACTAACTTGTATAATAATAATAATCACACTAACTTCTGTATGTTGGGTATATGAATGAGGTCATTAAAGACTATTCAAGACTTCCCTTTGAGGCTTGCAATCAAATTCCAAAGTCATTTACACATCCTATGAGGCCTCTGACTCCTCTATACCTACATAGCCTGATGTTTAGACTCTCCAGATCCCTAAACTCTGCTTCATTTTGTTTTGCAAGTGGCTGAACTGCTTTCCTCCTCAGGGCCTTTGCACGTGTTGGTCTCTGTCTGAAGCACACTTCCTGTTTCTTCCCTTCCCTTACGTGGCTCGGGTTGCAGTGTCATCTCCACAGAGCTGCTATGCACACTCATAACACCATCTGTATATTCTTCATAGAACTATGGCAAACAAAATAAGACGACAGAAGAGGATTTCACAGGCCTTTCATGACAGTGATCAGTTTAACACTGAGCATGTGGAGGTGGGCGGGAGGGTGTGTTTACTTAATTTGTGATTGCTCTGTATCCATCTCCCCACCGCGTGACTGCACGAATCGTGTGCGCTGATGCTTCCCCAGGCCTAGCACGTAAGAGGCTGACTAGCCCCTGTATGCCAGGGTCCTTATAGGTAGTGTGGGTTACTTCAGTCTTCATTACAATTCTGTAAGCAGAAATTAGCAATCTGTGGTCCATGAACTAAATCCAGCATGTCAACTGTTTTTGTTGGTAAGGAGTCAGTAGAACACAGCAACAGCAATTTGTTAATGTATTGTCTACAGCAACTTTTGGGCTACGGAAGGCAGAATTGAGTAGTTACAAAAGAGATTTGCTTGCAAAGCCAAAAATAATTACTCTCTAGCCTTTTAAAGAAAAGATCTGCTGACCCCTACTATATATGGGGTAACAGAATCTCCATTTCACAAGTGAGGAAACTGAAGATCAATGATCTCATATCCAGATTTCAAGCGGCAGAGCTGAGACTTAAAGTCACCACACTTCCTTTATCATCTTTCCCCATAAACCAAATCTCCCTGCTGACATATGTCTAGGAGAGAGCAACAAATTTCCACAGAGGAGGTGAAAATTTCCTTTGGTCTAAATCTTAAAGGAAAAGTTGGAATTCTGCCATGGACAAGAAAGGACAAAACACTCTAGGCTGAGACACAGAGGTATGAGGGAGCTTGGTGCGTTAGGAGGGAGCTTGGTGCGTTTAGGAGATAGCTAGTCAGACTGACTAAAACATGATGCCAGTGGTTGTGGGAACAATGGGCAGAAAATGACAGATAAAGAGGCTTCTAGAATGCAAAGAGACTGTGCCAGACTGGGGAGCCTGAACTTAAGTTTACAAATTGTGCTTTCTGCTTGTTCATCTTCTCTCTCAGTTAAATAATTTGACCATTTGTTCTAACTATATTTTCCATAAATTATCTACATGTAACACTATATTAGTACTATACTGTATACATTATAAAATATACAAATATGGGAAACTATAAAAGATAAACTGAAGGTAGAATGAATATCTAAAATATATCTTAAAATTTTTAAGTATTAATGGCTTACAAAACCTTTTGGCTTCCTTATAATAATGATGATGCTTAATGAGAGTGATGTTAGTGAATATGCTTAATTATACTTGAAAATCTTGGCTTAACACTGGTACAGCTGTTTAAAGTTATTATTTCAAGATTAATTTTCTTTAATGTGTGGTTTAAATAGCATCACAGCCAAAATGATAACTCACAGAGATACATGGATGCAAGTGAAAGAAATGAATTGTTGGTTTCACTTGCAAATTATAATAGGTATTTTTCAAAACTATCCACCAATTATGCAAAGTTTTTGTTTTAATTTGTCTGCTATGTTTACACCTTCCCTGCTGTCAATTGCTTGTCAATATGCAAATGAATTTGAAAGTGCTCTGTTTTCATATTTTATATGATGTGTTTACAATGTGTTCAAGCCACTGGAACGGTTCACCTGGAAATTTTTAAACAGGTTAGGAAATTGGAACTTTAAGTCTCTAATTTTGGCAGTTCTTGAAGATGATACATATCATGATCAGTGACAAAAATTGTATAACAAAGAAAATAATTCTAAACATCTATTTTGAAATGCTGTCTTAGAGGTTTCTCCAGGAAATGAACTATTTCCTCTCTCCTTACACCATCATGTTTATGTAGAAGGAACATATTTTGTGCTTATTTTTTAAAAAATAACCATACTCAGTGACAAGTCTGATTATTTCATTGCTGAATTCACTTCCTCTTATGGTTGACTGGAGAGTTCAGACTGTAAATGGGGGAAACCTTTGTCTTGGCATTTTCTTGTTATTCATTGGCTTCGTTTGCATTTTCTTTAATCCACAGCCTTTTTGAAATATCTCTTTAAGCCATTTATCCCTTTTGTGATGGCTGATCTAGTTAAAGGTATTCCATATACCCTGTAAGTCCACTTGGCCTGGAATATGGGAGCTGAACTGTGTTGTATCATGTTCAAGTAACTGAACAGCTGAGGGCTCCACTGTCAAATCCTTGAGGTCAATGCACATCTTAAATATTAGAAATCCTTAGCTGCCTTTTTTATAGTTTGGGTATCTAAGACTAGGAGTGCTGACGTTTTACTTCTGCTCCCAGTGGCTCATCTTGTTCACCCCCTGGTGCACACACCTTATTTTGGAGACTGCTGCCTTGAGTAGTGGAAAGCACACCACAAGTTGTTAGAAGTGGGTGACATGATCAGGTCCAATTTATTTTGGGGACTATATTTTGTGACTTTGTGTGTAGACATTTCAAATATTCTCCTAAAGTTTTTATTGTGTACATATTCAAATAAATAAGCTAGCTGGCTTTAAATAATGTTATCCAAATATCTTGAACAGGCAGCCACTCTGAGCCTTGTGAAAGCTGGTCTAGCCTTGTTAGTAGCTCAGGGCCCCTGGAAGTTCCCTGATAAGTCCATAGGCTTTGCCCTTTAGGTTAGAGAATAACTTGCTTTGGGAACAAGGAGACCACTGGGGTGACTTAAACACCTCAGTGTGGAAAGAAGAATAGTTAGGTTCTGCAAGAGTCAGGGGAAATGCTTTTTGTGACCCTATTAACACTAAAGATTTAAGAGGAAGAATTATTAGCTCTGACTCCACATTAAAAAGAGGGAGAAGAATTAAAGAAATGAGAAATGACTCTAGGTTAAGAGTTGCTTGAAGAGTTATACCCTTTTAAGCTTTAATGAAAAATTCTCGTGTTTTTCTTTAATATAAGCATATGAAGATAAAGAGCCAACCACTGACCTTGAAACAAGGAGAGAAAAAAATGGAGTTGGTTCCTGAGAAATAGAAGTTGTCAAAACAATACCTACCTAGGCAAAATTTAATAACCATTTTGGATAAAAGTGCTGTGCTAGTTTATTTTGCAAACCATGTACCCAGTACACGAGGGACTTCATCTTCTGTTAAGCCTACAGGTTTACTTTTGAAGGAAGAATTTGTGTGAAAAGTCTATTGCTTCATTTTATAATTTTTTCAATTACTGTAATTGTGTGAGTTTAGAAGACAAAATAAATTTTAAAAC TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 r 5' 58993 TCONS_00235623 TCONS_00235624 TCONS_00235625 TCONS_00235622 r 5' 141 EMBV3_15644 TGGCATCCCAGATGGTAGCACAGGCTTCTCTAGTAGACTAGCAGCTACACAAGATATGCC Gene GeneID:538551|EBAG9:NM_001078015:38_cdna UTR3_Alt 2 NULL GeneID:538551 14 GENE EBAG9 NULL estrogen receptor binding site associated, antigen, 9 EMBV3_00493 CTCTGAATTCCCCTCTCCCCAACCCTGTGCTGGCAGCTGTAGCTCTAACTTTAGTGAATA Gene BVT0102_151747 + 1 EMBV3_22656 GK000030.2:4940506-4995336 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248999 1 XLOC_151942 NonCoding TCONS_00248999 XLOC_151942 NonCoding NonCoding - X:4950814-4951197 - TSS186220 383 1 TCONS_00248999_2 92 1 0 0 0 0 0 0 0 0 0 0.000473820378387109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0286771975382926 0.861198388856293 0.0448982787561072 0.381869095937575 GATCTGCTATGAGTGCACAGCAGAATGTTGAACTGCTTAGTCACTTAAACTTTTTGGACCTATTTCCTCAAAGGGCTCTTGTGAGGATGGCATATGATCATTCTGGTGCAAAATCTAGACAAATCATTAGGTCTTCTGGTGGACCATTCCTCTGGGGACATGATCAGGGGAATGACCTCACTGCTCCCCAGCCTCTGAATTCCCCTCTCCCCAACCCTGTGCTGGCAGCTGTAGCTCTAACTTTAGTGAATACAGAGAATGATGGCCTGACATGCCAACACTGTTGAAGATCAAAAGAGTTTGTAGATAATAAGAGCAAAAGACCTATATGAACAAAAGGGATATTTGGGACTCCTGAGATTAGGAATGTCTACTGAAAGCAC TCONS_00246186 . 5' 10310 TCONS_00246186 . 5' 10310 EMBV3_19896 GAGTCTGAGATCCAATAACATTGCAGAACTGAGTCCAGGAGCCATCAATTCCTGCCGAAG Gene GeneID:541051|TBC1D30:XM_002687545:540_cdna UTR3_Alt 2 NULL GeneID:541051 5 GENE TBC1D30 NULL TBC1 domain family, member 30 EMBV3_17016 GGATGGGGAGCATCAGAAACCAGAGGAAAAAATAGGGTTGTGATTCCCTGCTCACAGTCC Gene BVV0102_193795 + 1 EMBV3_11335 GK000004.2:104680494-104715492 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182631 TCONS_00182630 1 XLOC_110913 NonCoding TCONS_00182630 XLOC_110913 NonCoding NonCoding - 4:104708282-104712713 - TSS136431 777 1 TCONS_00182630_1 77 2 0.825056433408578 1.92899265425146e-11 0 1.28786139388043e-11 0.00043818487526723 8.3705913812666e-09 0.000108761357541047 0 1.09356874110107e-08 0 0 0 0 0 0 0 0 0 0 0.000516824553357247 1.85107684080213e-05 0.000414141029750626 0 0 0 0.000222924050026359 0.000108810230513288 0.00124421820670432 0 0 0 0 noncoding 0 0 0 0 -0.0321809718380321 0.756470758108443 0.00560605289400791 0.913061497990224 CTCAGCTCTGGAATCCACACTTGTGGGGTCATAGCTTAAGGGTCAGCGGTTGAAAATGCCTTGTGGGGGTGACTCCCCAAACAGTTATCACCACAGCCTGATTCTCTGAGAGAGCTTATCTCTGGGCCGAGGGAAGGTGGAGCTCTGAGGCTGAGAAAGGAAGGAGGAGGGACTGCCATCTAGAAAGCAGAGGAAGGAGGGAATATCAAGCGTTAGCAAAATTCTGCTGGGCCATGCAGACCACATGCGCTTGGTCTTGTCCTCAGCCTCCATTTGTTATCCCCACACCTCTGAGGAATTAAAGGGCTCCTTCACCACCTCCTGGATCAGTCCTGCAATGATGCCCTATCTCCGGCCAGTTACCAAGACATGCCAACCACACCTGCTCCCACTCATCCCTTCCCTTGCCCACCAGTGTCTCGGAGAGTCTACAGCAATGAAACCCACCCAGAAGTCCTGCTCCAATTGGTTTTCATGACCATGTGATTGACCCTGAATTGAAACACGATAATGGAATGCTTCTAAATACACATTCTTCTTGGAAAATGTATGAAGTTTTTTTCTTAATTTTTTTAATGGAATCAGAGGACTTGGTTCTTGGACAGACTGTTGGTGTGAGGTAAGACGAAAAGGTTGAGTGGCCATGTTCTAACACACCCATGCTTCTTGGTCACACTTGGTTTCTAAACCCAAATAGCATTGTCCATCCAAGGTCTGCCCTGGACTGTGAGCAGGGAATCACAACCCTATTTTTTCCTCTGGTTTCTGATGCTCCCC TCONS_00185179 TCONS_00185180 r 3' 2780 TCONS_00185179 TCONS_00185180 r 3' 7210 EMBV3_09058 TCTCCGTTTCCTGTTTCTTTTCGAGTCAGGGTTTCTGATAAGGATTACATATTAAGTGTC Gene BVV0102_140661 + 0 NULL GK000013.2:32445159-32475796 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042459 TCONS_00042456 TCONS_00042458 1 XLOC_025671 Coding TCONS_00042456 XLOC_025671 Coding Coding STAM 13:32390136-32450200 = TSS31596 7236 1 TCONS_00042456_3 534 0.142482034273079 14 0.879759585768277 0.000634797169276103 0.000497112280766543 0.000204062826443834 0.000100656897149843 2.19411226737517e-09 9.58399431962984e-05 8.25344865680393e-08 1.16091383633292e-08 5.50227077060149e-07 9.67527213282787e-05 1.4773808207027e-07 2.70695743765371e-08 2.00420560460799e-05 6.25341562610057e-05 2.09645918084193e-05 0.00096858063216503 7.5731739686717e-08 0.00103671133805678 1.50839472546511e-06 4.09178719277059e-08 1.95627451981617e-08 0.000477811230189184 0.000627058975787204 0.000948895953105122 0.000383199574775099 0.000374237263328961 4.58239094396994e-06 0.00011977920960617 9.66739417692435e-08 0.000290382929733924 NM_001076842.1 STAM Bos taurus signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (STAM), mRNA. 0.0 3889 100.00 0.297816473189608 NM_003473.3 STAM Homo sapiens signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (STAM), transcript variant 1, mRNA. 0.0 3613 84.63 0.444720840243228 TCONS_00042456_3 sp|P70297|STAM1_MOUSE STAM1_MOUSE Signal transducing adapter molecule 1; 0.0 976 88.69 0.99812734082397 4 coding 0 0 0 0 -0.00921210435357675 0.951498972393577 0.0204075231491876 0.655284233483846 GCCGCCGCCGCCGCCGCTGCCGCGGTTGCTGCGGGTCGGGGAGAGCTGGGGTTGTCGCGGGCCGCGGAGAGTCCGTCTCGGCCGCTCTTTTTGCCCGAGGAGACTTCCTTCCTAGGTCGCACCCTGACTCCCGTGGTGTCGAGGAGGAGTCCCTGCGGACACCTCTGCACGAAGTGGAGATGCCTCTGTTTGCCACCAATCCCTTCGATCAGGATGTCGAGAAAGCAACCAGTGAGATGAATACTGCTGAGGATTGGGGCCTCATTTTGGATATTTGTGATAAAGTCGGTCAGTCTCGCACTGGACCTAAAGATTGTCTTCGGTCTATTATGAGGAGGGTAAACCATAAAGATCCTCATGTGGCTATGCAGGCTCTCACTCTTCTAGGAGCATGTGTATCAAACTGTGGCAAAATTTTTCACTTAGAAGTATGTTCGAGAGATTTTGCTAGTGAAGTAAGCAACGTATTAAACAAGGGTCATCCTAAAGTATGTGAAAAATTGAAGGCTCTTATGGTTGAATGGACGGATGAATTCAAGAATGATCCACAGCTCAGTCTGATATCAGCAATGATTAAGAACCTGAAAGAACAGGGTGTTACATTTCCCGCTATTGGCTCTCAGGCTGCAGAACAAGCGAAAGCAAGCCCAGCTCTGGTAGCCAAGGATCCTGGTACTGCGGCTAACAAAAAAGAAGAGGAAGATTTAGCGAAAGCCATTGAGTTGTCCCTGAAGGAACAAAGGCAGCAGTCAACCACCCTTTCCACTTTGTATCCAAGCACATCCAACCTCTTAACTAACCATCAACATGAAGGCCGGAAAGTTCGTGCTATATACGACTTTGAAGCTGCTGAAGATAATGAACTGACTTTTAAAGCTGGAGAAATTATTACAGTTCTTGATGACAGTGACCCCAACTGGTGGAAAGGGGAAACCCATCAAGGCATGGGGCTCTTCCCTTCAAATTTTGTGACTGCAGATCTCACTGTTGAGCCTGAAATGATTAAAACAGAGAAGAAGACGGTACAATTTAGTGATGAAGTTCAGGTAGAAACGATAGAACCAGAGCCAGAACCAGCCTACATTGATGAGGATAAAATGGACCAGTTGCTACAGATGTTGCAAAGTACAGATCCCAGTGATGATCAACCAGATCTTCCAGAGTTACTTCATCTTGAAGCAATGTGTCACCAGATGGGGCCTCTCATTGATGAGAAGCTGGAGGATATTGATAGAAAACATTCAGAACTCTCAGAACTGAATGTGAAAGTGATGGAAGCCCTGTCCTTGTATACCAAGTTAATGAATGAAGACCCCATGTATTCCATGTATGCAAAATTACAGAATCAGCAGTATTATATTCAGTCATCTGGAGTTTCTGGTTCTCAGGTGTACCCTCCTCAGAGTGGTGCTTACCTGGTCGCAGGGAGCGCCCAGATGAGCCACCTGCAGAGCTACAGCCTACCCCCAGAGCAGCTGTCTTCCCTCAGCCAAGGAGCAGTGCCACCATCTGCAAACCCAGCCCTTCCTACTCAGCAAGCCCAGGCTTCCTACCCCAGCACAATGGTCAGCTCCGTCCCGGGAAGTACGTATCCCAGCCAGGCTTCAGTGTACAGTCCTCCCCCTGCTGCCACAGCTGCTCCCGACGTCACCATCTACCAGAACACAGGGACCAGCCTGTCCCAGGTGCCGAACTATACATTACCGTCCACACTGCCCCAGCCTGGGGGCAGCCAGCAGCCACCTCAGCCGCAGCAGCCGTACTCCCAGAAGGCTCTGCTATAGGACTGGAGTCCCCTTTGTGGCAAATACCCGCCGATCGCCAATGGCAATGTTACGAGATTCTTTAATATCTTAAGATTGGTTTACCCTCAGCTTATAGGAATCGTATCTTGGTCAACACGTTCCAATGTTCAAGAAGGGAGATCCCTCTTCAATTTGCACTGACTTTTTAGAGAGTCTCCCCTCCCCTCCCCTGTGAGGAATGAAACTACTTACAACATATAATTCCTTTCATAATATGAAAGGGTCAATGCAAGATTATCTGTCTCGTAAAATCACCTGGCCTGCAGAGTCAATCTTACCAACACTGTTGTGGCAAACGTTGTGTACATAGGTTGCTGTGTAACTTCACTACTGGCCATTTTGAATCACGAGTGGTGATCATGTGAATATATTTAACACTGTTAAATTAATTGACATTGCTATTTTATTTTAATCATGAACAGCTACCATGTTTCATAATGTTTTGTGTAAATTGAAGATAATTACACTATCCTTTTAAACTGCAAGAGAACAAAACTGTAGCATATGTACATGAAGGTGTTATGTTGTCCCCGTTTCAGTTTCCCATTCAGCTGAACCTTCCTGGGAGTAATTGGGAGCTGAATGCACATATGTTATGTCATTCTGTAGCCTCTGCATACTACTAGCTGTCATCACACCAGCGTACAGTAGCTAAATTTTTGGTGCACTTCTAGCAAATGATGATGTTCCCTTTTACACTTTGACATTTTGGCATGATATATCAGAATACTGTGGGACCATGAGACAAAAGTCAAGTTGGACTGCATTCTTTTATATCTTAACTTTTAAAGAGATAATGTCAATTTACTTTTTCCTAGTCAAAGATAGTAATTAGGTTTCTAAGCTGTATACTGTGTTTATTGGTGGCAGTGACACCAAAGATAGAGGCAAAGGATAGAAGTTTTTAAACTGGAAAGAGAATATGAATTACACTACAATTTCAGTCTCTTGTAATTATTTAGGCGATGGTGAAACTCAATTCATCTGTCTTATTCCACTGCTAGTCTTATCTTTAACATATTGTATCCTTTAATTCTTCATTAAAATAAGTGTAAGTAGATGTTTCAAAGTCATCGAGGTTCCTGGCTTTGCTTAACAGTTTGTATATTTATTCTTGTCTTTGAAACTGGATTTATAGGCTGTTTTCTCTCTCTCCTCTCTTTTAAAGTTCCCGAATGGAATTATTTTGGCTTCTTATTCTGAAGTAGTTTTGAGTGAATGCTTTTTCTTTTAATCCATATGAAATATGTTTTCTACTGATATTTTAATCTCCTTAAATATTTATGATTTCCCTAGTTGTGGTGTTATTTAACACTATTATTGAAACAACTGAAGAATTGAGTACCATAGTAAATGAATTGATTTATTAACAGGTTTCACACCATAAATGAAGATTTAATTTGTATTTTCTGAGGTAGGTTCAAGGTAGGTTCAAATTTAAATCACCATCTTATATCTAATTTGTGCCTTCCTGAGTTTAGAGTACATTGCCCTCAAACAGTAATTTTAAAATTCTAAATTAAACTTTACATTAAAAATTTTTAATATGTTGGTTTTTGCTAAACATTGTCAAAAGATTGTAATATTTTTCATAGCCATTTGAATAGTTTAAGTGATACACTTTGTCTCAATTCATACTGTATTTTTCTCTTTTGATAAATTCCCCAATACCAATGGCAAAATGTATCATTGTCCCATTTTATTTTGATAGCTTTGTGCTGTAAAATCAATGACATATTCTCTAGTATGTGTTTGCTTTGTAAAAGTCAAAGAATGGTGAAATGAACAAAGGCTACCCTTATTACAAGGCATGTGTAAGTTTCTTTGCCTAGTCATATTACTAGGCTTTTATAAAGATTTAAATGATGAATACTTAAAAATACTTAAAACTAATACTATATTATAAGCTTGCAGTTTTCTTTTACTAGGCTTTCCCAGTGGCTCAGCGGTAAAGAATCTGCCTGCAGAGCAGGAGATGCTGGCTTGATCCCTGAGTTGAGAGGATTCCCTGGAGAAGGAAATGGCAACTCACTCCAGTTTTCTTGCCTGGGAAATCCCATGGATAGAGGATCCTGGTGGGTTATGGTCCATGGGGTCACAAAAGAGCTGTACATCACTCAGCAACTAAAAAGCTTTCACTTACTAGGTGTGAAAATACCAGATGGAAAAAATTCCCCTGAAAAGGAAGCACTGGATTTTCCATCTTTCAGGTGACACGGCAAGGCTAGAAATAGAAAAGGACCAATTAGAAGCACAGTGATTTTGTTCTGCAACCAGAGTATGTGCTGCACTTTCGTAAAATTTTTCTTTAACAGGTAGCTGTCCCCTTTTAAAGGGAATTGAATTATTTATAAAATAAATTAGCTATAAAATGAATTTCTGGGAAGCAAATTTTACTTCTTGGTAAAATTTTTTTTACTTTTATAAAGTAAAAGCAAAAAATTTTTTTTACTTTTATAAAGTTTTATAAAGTTTGTGTATCCATAAGCCAGTGACATCTGAATGGAAAAATTCTGCCCAGTTACTGTCTAGCAAGAGTAGCCAACAAACCTCGTGGTCAGTCAGATGGCTAATACATCAGTGTCCTAAACCCACCTACTGGTAATAACACATGGTGCATCCTTCCCCTCATTTCCCCTAACTCTGTGGTCCTGCTTTGCTGTTACTGTCTCTCCTACTCATGAGGAACCTTTTTCTGTGCCAGATTTTCTTCTGAAAGTTTGTCTCTATACCTCTTAATTTTTGTAATTAAAATGCTTAGTAGACCCCTAGCATTCTTTTCTCATAGTTTTCATAAATGACACATGTATAATTCAGCGTGAAACTTATCTTTAGTCCCAGGCTTCAAGTTTATAAAAGATAAATTAGTGTCCTATATGATAAACTCTGCAACTGCAAAAACTATACAGTTATTTTCTAAATTGAGGTCCATTGGTATAATTGGTCAAATTTTCATTTAAGACATTAAAATCGCTGTTTTCTTTTTCTCATCTTACCAGTTAGCAATTATAGAGTCCTGTTGTATCATTATTTATTTAATAACAAAATCATAGCATTTTCTAATTTAAAAAGTTTTTCATTGTCAATGAATCTTTGTACCCTTTAGAATAAACGTAAAGAAAAAAACTTAACTATTTCTCAAAGACCTTATGTTCAGTTATCTTTTTATTTTAGAATCATGATTAAGTGTTCTTGTCAATACCTAGATTATTTTCTTTCTTTTTTTAAAGATTTTTTTTGACGTGAACCATTTTTAAAGTCTTTAATGAGTTTGTTACAATATTGTTTCTATTTTATATTTTGTTTTTTATGAGCATGAGGCATGTGGAATCTTAGCTCCTTGACCAGGGATCGAACCTGCACCCCGTGCTTTGGAAGTTGAAGTCTTAACCACTGGACCACCAGGGAAGTCCCTAGATTATTTTCTATGCTATTTATGATTACAGCCCCTGTTTCTAATCAAAACTGCCTTGAATTTTATGCACTTTTTTTTATATGGTCTTCCTTTGAGATTATTTTTACCCCCTGATTTTTCTAGCTTCAGAAATATTGTTTCCATACAGATTTCCTTATTGAACAAAGCCTAACTCTTTATTGGTGATAACTTGTATTCATACTGTTCTTTGCTGATTTTCCTACTCCTAGCTTTATGTTAATACTTGCCATTGCCATTATTCTCCGTTTCCTGTTTCTTTTCGAGTCAGGGTTTCTGATAAGGATTACATATTAAGTGTCAGTAAGCTCCTGGATAAACATGAAAGGAACTGGTTCTAATATCTTTTGGTGTTCATAGACTAAAGAAAGTTATGTGTATTTTAGAAAAGAGTATATTCAGATTTTTTTATCTTATGCCATCAGTAACAAATATTTTTGAGTTTATGGCCTCAAAATATGTGTATTTACAAATGGTACAAGTTCTACAGTAGTAATACGTGTAGTACATTATGAAACCCAAGAAATCTTACAAGGATAAGAGGAAAAATTATGAATAGAAATTCTGATATTTCTTCGCTTATCTCTGGTTCATTAGTCGGTACCCTAGAATGTATCTGCCTGATTTGGAGACCACTGATTTAGAGGTTACGATTAGACAGAGTGAAAGTACTGTGATACTAGGTTGGCCATTTGAAGTCAGCATCTGATACTACAAGTGCTGCTTTTCCCAGCCGCTCTCTATGTTGAGAATTTTCAGAGTTATAAAAAGATTGAAGTAATATATTGAAAAGCTGAGTACTCTTCACCTGATTCATGAATCATTAACATTTTGTTACATTGGCTTTATCTCTTTATGTTTATATATATATGTGTGTGTATGTGTATTCATGCTTGCATATAGGTGTGTCTCTGTGTGCATATCCACATATACTATATTGTGTGAATAGACAAAGTTAGACTTTGCACTAAACTTATACCTAAGCATTTCATCATGTATTTTGTTAAAGATAAATACCTCTTCCTTCATAACCTAAACCTTTATCCCATCTAAGAAAATTAACAGCAATTTTGTAATATAATTGTTATCAAACATCCCTAATAATCCCTGTTTTATAGGTACAGTTTTTTTAAATTCCAGGAAATAGATCACATTTTTAATGTCCCTTTATTCTCTATGAGTCTAGATTAATCTTTTTTTTTGCCTTTTTAAAGATCAAACCTGTTTGTCGTTTAGTGTGTCCCACATTCTGGATTTATCGCTCTTTTTTTTATGTTAATTATTATTTATTACTTGATGCTCTGTTCTCATTATAGTCCTTTTTTCTTAACCCTTCAAAAGTTAGTCAGAATTATGTGATTTATGGTTAAAGGTGGTGAATCTAAATTTTTCAACCTCATATCAGAAAAGTGTATATATAAGTGAACATTTTGAGCCTTCAGATGTGGTTATTCTGTATAAATAGAGGCTGTGTGCTCAGTCCACTAATGCTTAGTAGTTTTGTGTCCTTCTTATCAAATTGCAATTAGAGTCAATGAAGAAAATCTGAACCCTTAAAAATAATTGGCTCCCTTCTATCCCCATTCAAACCCAAATCAGCTTTTCTCAAGCTTGTATGTACCTGATTCACTCACAGTGGCTTTTAAGTATTTTAGAAATGGCATCAACAAGTATAGAACTTTGTTTTAGGGTGTGTACATTTTGGCATGTTTGTTTTAAAAGACTCATTACCTTTTATCATATCTTCTATTAAGATACTGAAATCACTTTAAGGGAAGGGAAGTACTTCCTTTTTAAAAAATCTAGTTTTTACTTGAGATTGGTTGCCAAATTGGAATCAGGCTGAGTAAAATTTATACCCAGAGTAAAGTTAGAAACACATGCAAGTTACAATAATATACACTATCAGGTTGTTAAGTAGCTGGTTTAAACCCTCATATTATTTCAGTTCGTTAATGGCTTAAAAAAAAAAAAAAAACCAGTATTTGTAATCCATTG EMBV3_16444 TGTGGCAAGGTAAATGGGGGAGTTCTTATCTGTGAATATTTCAGGGGATATCCTTGGCCC Gene BVV0102_323883 + 0 NULL GK000004.2:72487001-72499900 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15556 TGTGACATGTGTAACGTTACTAGTAAACTCACAGAGGGAGCTTACAGTGGGGCATGCTTC Gene BVT0102_369256 + 0 NULL GK000012.2:11116235-11131390 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034484 TCONS_00034483 TCONS_00034485 1 XLOC_020695 Coding TCONS_00034485 XLOC_020695 NonCoding Coding LECT1 12:11109116-11122141 j TSS25471 6736 2 TCONS_00034485_8 94 0.0776425178147268 3 0.483031326781327 8.86381268885243e-06 4.8983384559381e-05 9.98714067042822e-53 1.70136005053468e-05 2.39667583801844e-06 3.3432665583003e-06 3.18721783766397e-06 7.85639559892063e-06 6.91877743599185e-05 9.54743226619403e-07 8.56279218900766e-07 4.01431086877658e-06 6.91266315369616e-07 1.94293950637041e-05 1.5753488103368e-05 0.000133284695957724 2.18708628545438e-05 0.000230772607932918 7.44528925771783e-14 0.000157010189073844 6.37141360174196e-05 9.93225876014001e-05 4.65490846223024e-05 5.03057436394871e-05 1.53087575176383e-05 1.32832553137057e-124 4.03422081800056e-05 1.84967367294477e-05 1.12616359017717e-05 1.21952335093168e-05 XM_005213543.1 LECT1 PREDICTED: Bos taurus leukocyte cell derived chemotaxin 1 (LECT1), 0.0 4617 99.88 0.381235154394299 NM_007015.2 LECT1 Homo sapiens leukocyte cell derived chemotaxin 1 (LECT1), 3e-150 538 77.81 0.104958432304038 0 noncoding 0 0 0 0 -0.0489160257205081 0.695442483391105 0.036171740884103 0.619897701921764 TTCAACACATACATACAGGTTGACTTTTTTCGTACAGCTAGAACTGTGGAGGTAGGAAGAAATCCAGAGAGAAAGAAGAGAACTGGTAAGAAAAATCGTGACCACAACGACCACAAGAAGACTACGCAGCGGCCCTCAGGGCACCCCAGCCCCTGGAAGACCAAACAACGGAACCAGACCCAGCGTCCAAGAGGACGCAGAGCCCTTCAACCCAGACAACCCTTACCACCAGCAGGAAGGAGAAAGCATGACATTCGACCCCAGACTGGATCATGAAGGAATCTGCTGTATAGAATGCAGGAGGAGCTACACCCACTGCCAGAAGATCTGTGAGCCTCTGGGGGGCTACCACCCATGGCCCTATAACTACCAGGGCTGCCGTTCCGCCTGCAGAGTCATCATGCCCTGTAGCTGGTGGGTGGCCCGCATCCTGGGCATGGTGTGAAAGCGTTCAGGGAGCAGGCGCTGTGAAGAAGTCAAACTCCAGAGACAACCAAAGCCTGGGGCATCCTGAAGCTAAAGGGACCATGACGGATTTTCTGTTCCATCTGAGCAATGTTATTCGAGACACTGAACAGAATACTTTTCAATGCTTTATGTAAGAACTTTATTCAGAATTGCAGAAGTACTGAGAGGGTAGTTTTAAGTCTAAAATATCATAATAATCCTTTTATTACTTGCTATTGTTTTGCTTTTCTTTGCCAGGAAGGTCTGCTTTTAAGCCTTCCTTACCAAGCTATTTTGAAATAACCACGAAAAATTACTTACAATATATCAAAGATCTCAACTGTACACTTGAGTTACTTTTAAATCAATTCACAGACTAAAACGATTGTCTTCTGTTGTTATTTGCTCAGAATTCCTGTTTTTCTTAATCTTGATTGTTCTTTCCTAGTCTTGCAAATGTGCCCCCAGAGTTCCCAGATAAAAAGGAGACAAAAAAGGGAGAATGAGATATCTAATGAAATCTCCCTGAGAGTGAACATCACCCTGAAGGCAGCAGCTCTCGGGAGACCCTGGGAATAGGAGGCTGGCCTGTTGAGAGCGGCGCCCAGGAAGAGCGCTCTAGGATGAGGAAGAAAGCTCAGTGCAAGGCCAAGCAGACTTGTGGGGAGCGCTTCCACCGACATTCTGAAAGCCAGGTCTTCACAGCCCTTTCAAGCTGCTGTCAGTTAAGTGGTCTTCGGGCTTGAAGCAGCATAATGATTTCCACCTTTGTAGTACAAGTTGGGCTGCTGACATAGTTCAGTTACCAGTTGAGTTACTCTCCTAATAACACGGCGGGCAGCGCTGTCTGACAGACACGGCTGAGGAGGAATGGCTTATTTATAATGACAGAAAGAATCTCAGGACCAAGGACTGTCTTTAAAAATTGAGAGGTTAGATCAGGAAGATGAACAGGTATTTCATATTTTTGACATTTTAGTTTTGACTCTCATAGTTTTAAGAGATTAAAAACCTTCCTAAAGAAAGTAAGTTTTCCAAAACAACACAAAGATTCAGAGAGATGAAAGGTTGTGATACCACAACGGTCCCATAGTCTAAAGACATCTTACTACTATACATCTAGTTCTGAAACTTGGTTATCAGACGAACACCCATATACCTACATTAAATGGGATGAACAGCAAGTTAGGTCTTTGGAGAAAAAAGGGATGAAGGACAGACACACTGACATGTATGGTCACACTGTTCAGGCAGCACCAACTTCCTGCAGCTACAAATTTTACATTTTCAAAATGGTTGCCCCTCTACTAAGCAAGTCAGTGCCAATGGTTATGCACACCACCTCCCACCTCCATCACCCAGCAGCCTCTATGTACTTGCCTCTGCAAATCAAAGAGGAAAAAAGACGGGAGTCAGTGATCCCACCCCAGAAGTGCTTGCGGTCTCATGAGGCAGATGACTGGGCTTCAGTACACCAAAGGCCTGGATAGACTTGGGAGCACTGGGCTTCTGGGGAAGAGAAGGCCTTCAGTGGGTCTTTGAGGATGAGCAGGAGTCGGCCAGGTGGTGACAGTAAGGGCATTCCAGGCAGAGGGAGCAGTTCCGGTAGAGGCGTGAGGCTGTGCGGTTAAGCAGGGAAACGAAGCATTCAGGCTGAGGCAGGCGTGTCAGGATGGAAACAGAGGCAGAAGCTCCAAATGATATTGCATGTCAACTTTGAGTTTACTGGGGGAAGAAGGAACAGGAGGAAATGGCAGCCCACCCCAGTACTCTTGCCCAGAAAATCCCATGGACAGAAAAGCCTGGAGGGCTACAGTCCAGAGTCACCAAGAGTCGGACACGACTTAGCTACTGAACACACACACACAGAAGGCAAAGGAAACCAACGGAAGGTTTTGGGCAAGGAGGGGGCTGGTCGTTTCCACTTTACATGGAGCCCCTTGGAAGCTTTCCATGTGGGCACTGAAGGGTGCCAGCCTTAGCGAGGAGGACAGTGAATCACGAGGGAAGGAAGGCTGCCTCTTGAAAAGATGCTCCCTCTTCAAAGCACCACAAGTAAATGAAATATAGGTGGATAACTTAGATAATGGGATTATGCTGTTATGAAAGTCACTCGGCACCTAAGGAAGTCAACATAGCAGGGGGAAAAAATGGATGTTTTAAGGATGAAAAAGAAAAAGTGTAGTTGCTTGGTTGTGTCCATCTTGGTGACCCCATGGACTGTGTAGCCCACCAGGATCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCTAACCCAGGCATCAAGCCCAGGTCTCCTGCATTGCAGGCAGATTCTTTACCATCTGAGCCAAAGCTTTGACCTTTTTAAGGACAGAGGGGAAAGTCAAAATTGGATTAAATGCAGGAATGACAAAGAGACTCAAATTTTTCAATGAGAAAAACGAAAGGTCTACTTTGAAAGAGAAGAATCGAGTGTACAAAGAAGAATATTTGGTTAAGGGAGAGGGGACACTGCAGAATACAAACTTTTCACAAACTGCTCCTAATCCCTAAGGGACCTCTGACCTGGTCAGTCCAAAAGCTGCAAATGCTGCCCAGTTTGCAGTGCTGAACCTCGACCTGTCCTTTAGCTAATCCTCAGTGGTGAGGCAGACCAATCCTTAGGACACCACAGGTTCATTTTCAAGGTCCTCGAGTCCCATCTTGACTCAGTAGTCTTAAACGTGATCGGTGCTGCTATGTCAGCAGAGAAAATGAAAAACAGTACTGCTGGGTTTCAGGAAGTGATCCACGTCACATGACATACCTCACTGAACAAACTTCCTCTACAATGTTAAGAATTTGCTTAACCTCATCCTTAAACCCCCTTCCCACCATCACCTCAAATAACTGTTGACACTAAAAAAGCAAATATATTCAGAATAATCACTTAACCCACTTAACAGGTGTTCTTATACCAGATTTTATTACAGTCCGAAATACAAGCTACATTTTTACAAAGTAGAAATTCCTTGTGTGAGTGGAATAATTTTTACTTCTGCATAAGCTGAATATGCTGATTTGTTTTATGTACATTTATTTTATAGAAATGTCACATTTCCTCTTAAGTTAACTGACTTATTGAGGGGAAGGAGGGCGTCAACAAAAATCTACATGCAGATAGCCCCAGTAGCATATGCAGAGAGAAAGGTGCAAATTTAAGTCAACTACGCAAACTTCAGCAAAAATGTTTTACAAGCAGAGTGAGTTTTGCTGTTTATAAAAGAAAGCTGAATTCCTTTTAAGGGCTTTTGTACATATATGCATGCTCATATTTTATATGCATATACAGGTTTCACTCTGAAAAAGCCCAGTATGTTAGAATCAATTTACAGAACCAGTTTAAGTTAGTATCGATTGACTCAACTACAGATTTTATTTAAAATGCTTACATTCAAAAGTAATCAATTTACATACAATTTTTAGGTACTTCCTATGTAAAGGTAGGTACATCTATACATGCATTTGCGCATGTATTGATGTAGCCTAACCTGGCAATAGCTAATGCTATTTTCTAAGGTGTTTTGGTTGACTGAACCTTTACCATGTCTTAATAGTTTTTAAATCAAATATACAAGAGTCAGTCTTTATTAGGATCTATGTTATCACCATAGGTTGATAAAAAGACCAGTAACAAAGCTATAAAGAAGTCCCTAGGTTAACCACCAAGTTATTAAACACCATTTGTTTTAAGAAGCATGCCCCACTGTAAGCTCCCTCTGTGAGTTTACTAGTAACGTTACACATGTCACATTTCTCTTCTTTCTGTGCCTGCTCCTGTGCAAAAATTCTCTTCCTATCAAATTTCTGCAACTGAATCAATCTCCTTTTTCTCATCTGTAACACGGCTGCAAAAATCTTAACAGCAATGAGATAGTCTGGAAGAAATACTCTGTACACTTTTTCTTAAAACTAGCATTATATTTGCACATTTACTTGCAGTTTCTTAAAAACATGAATTCCTTAGCTTCCTGTTCTTCAGCTTCCCAAGGTGTGGATTATTTACCAAAAATTTTCTTTTCAACCGCCTATTTATTTCCTTAACATAGACCATTATCCATCTTTTTTATGATGGATTTACTTTATACTGACACAGTCAAAGACCTGGAATAAATTTACCCAGCATAAACTTCCTCTCAGCAGGAAATTATGCTTTTAAAGGCAAGTGGTTTCTTTTTAATTAAAACCATACTCCTGCCTAGAAGGTGCTAAGGAAACTACAGCTACGAAGTGAGAAAGATCTCCACTCGAGAAAGCTCTCCCCTAACACACATCCTACTTGACTTAATCAACCAGCATTACAATGTTTAATTCATTTAGCACCTATGTGTAATCATACAACATCTGAGAATATTCCAGTTGCTAAAGAAGTTGCCTTATTTAAATCAATACTATGATATTCCATATATACTCCATGGATACTGACTACTCTAGTATTTGCTGCTCAATAATATCTCAGCAACAATAAATAGCACATTGTCCAAATGGTCTCAATTTGCTTCACTTGACTGAAAAAGATTTTCATCATGTGCAACACCACATGGTTATATGGATTCAATGACTTGTAATGACCGTAAGGTTCTGTTGACAGAGGAACAAAAACCATCACTAAGCACCTCTCCTCTGCCTCACATCTACATTAGAGGGAAACAGATTCTTCAAAAGGACAAGATCCCGAGTAGCTTTTCACCTGTCTCTATAATTTTTTGGAAATAAGACATAAGAGATGAAGAGCACTAATAACTTCACTTTTTAATCTTTTAGTCTATGAAATCACTTTCTTAAGGGTAAGGTCCCAGGTCACATACTTTGAAGTCACCAGGTCACAATAAACAGATTTACTGGGCCCTACAAACCTACTGATTCAAATCTCGGGAGGAAAGCAGTGAGAGCCTACATTGTAAGGAACAAGCTTCGCAGGCAGAGGTTGTTCACCCTCAAGCCTACACAGAATACCTTCCCAAAGCTGTAATTTTTAGTTGCCTGGCATTTGGGACAATTGTCAGAAGATCAGCTCAAGACTGGGGTAAACAGCTTAAGTTTTATGTAAGTTAAATTCTATCTGTCTAAGTGAAAGAACGCTTATGAACAAAGTATATACAAGTGTGTCTGGGAAAAAATTCCTTTGTAAAACTAAGGATTTAGACTAGTCAGTATTTAAGATTCATTCTGGCTCTAAAATTCTGATTTTTGTTTTGTCTCATGTTGACAAGGAATGGAATGCAAATACATGTTTAAGGGAGTATAGGTCCCAAAACTACTTCTAGTCTTGCCAGATGGCCCATAAAAACATGCCTGCTGATCTTTGACAATTCTATTCAACATCTAATCCTGTACCACACTTACTAAGTTTCTGTTCATCATCAGCTGTTCTAATTAACCCAATTTCACCTCAGTATCTAGTCTTCTATACTTAGATTCCAGAACAGGAAACAGCTTTGCTAAACAAAGATTAAACTGAAATGTAATATCACCTGTAATGTGAAAAGAACAGAAATAAATATTTCAATAAAATACTGACCCTAAGGATTTCACATATAACCATTAAGTCATAAACTGTAAGTCAAATTCATTCACATCATCAGGTGTTCAAAGTAAACTCCACTGCAATCACTGTTAGATTTATAAACTACATTTGACTGCATGTACATTTAATAAAATGTGAAGACATAAACTGTGACAGCACCGAGAACAACAGGGTTCCACATTAAGCTGGGGCGAGCCCTGGCATTAGCTACCATCACCTCACCAGGACCACCAGCAAGGCCCTAGGTGACGGAGGCCCCCACCACCTCCAGCCACCCCGTCTCCCCTCACTCGCTCCGCCCCAGCACCGCCGCATCCCCAGCAGCCTCTGCTCCTTCTGCTGGCAGTGCTGGTTCTCAAGCATCTTCCCGGCTCCCTCCACTTCCTTCAAGTCTGTATTTAGGCATCACCTGCTCACTGAGTTCTCAACTGGGCTCCTACATCAAGTGTCAACCACCAATTGTCCTCTTTGCATATGCCGTTTTCTCCCTCAGCATCTAGTTAACACCATTAACATGCACTCTGCCTATTTCCCCCACGAGCTAGGCTCCATAAATGCAGAGAATTCATCCACCAGTGCAGCCCCCTGCTTTGGAAACAGTGTCTGGTACATACCTGGCCTTCAGTGTTGATGAGAATGGGTATGATGCCATGAATATGAATTTTTCACATATCTATATTACTCTATATATTATTCCATTAC EMBV3_42704 AGGTGTTTATTACCTCAGTGTGGGTGCAGGCTGTTTTGTAGCCAGCATTCTTCTCCTTGC Gene GeneID:538938|SEC62:XM_002684930:79_cdna UTR3_Alt 2 NULL GeneID:538938 1 GENE SEC62 TLOC1 SEC62 homolog (S. cerevisiae) EMBV3_32928 CTTCCCCTGGATACAATCACTTTCTACAAGATTATGGCGACAAGCTGAATATGGAGCTGA Variant GeneID:613357|ERP29:NM_001076271:255_cdna 284^422 3 EMBV3_28450 GeneID:613357 17 GENE ERP29 MGC140608 endoplasmic reticulum protein 29 EMBV3_15396 TCGAATTTATTCTGATCTGTCCAGTATCTGCAGAGCCGCTGTACACGCTGGCGTGGTTCA Gene GeneID:536186|CRISPLD1:NM_001101165:52_cdna UTR3_Alt 2 NULL GeneID:536186 14 GENE CRISPLD1 NULL cysteine-rich secretory protein LCCL domain containing 1 EMBV3_22305 CTCTGAGCACTGCTTTAGGGTGGAGAAGGAAAATGCTTTCTGTACATCGCTAGGGTAGAC Gene GeneID:539528|KCNB1:XM_002692499:613_cdna Constitutive 0 NULL GeneID:539528 13 GENE KCNB1 NULL potassium voltage-gated channel, Shab-related subfamily, member 1 EMBV3_07554 GATGCTGTCCCCAGGAGCCTCAGACATCTCCACAGTCCTGTATCTCAGGAGTCAAGTCCA Gene GeneID:518878|LOC518878:XM_002696133:261_cdna Constitutive 0 NULL GeneID:518878 19 GENE LOC518878 NULL similar to Coiled-coil domain containing 57 EMBV3_05950 GTCCCCGGCAGTGTGACTGTTTACACGGTTTGGCAATAGGTTCAGTTCTGATTGCTTCAG Gene BVV0102_143744 + 0 NULL GK000022.2:17613439-17627572 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29174 GAGAAGATCTACCCGAGGGAGAATCTGAGACATCTTGCCTACTTTTCTTCTTCCAGCTCC Gene GeneID:786490|LOC786490:XM_002687764:89_cdna UTR3_Alt 2 NULL GeneID:786490 5 GENE LOC786490 NULL similar to epithelial membrane protein 1 EMBV3_41235 GATGAGTCTCCATCAGCCAAAAGCCCAGACTGTACCCAAACGTTCTCGTGATGACATCCT Gene GeneID:616962|LOC616962:XM_002694022:10_cdna Constitutive 0 NULL GeneID:616962 16 GENE LOC616962 NULL hypothetical protein LOC616962 EMBV3_00287 TCTATTCCCATGCCAGCACTGTCTGCTGTGCACTGTGTCCTATTACTGTAAATCACCTGG Gene BVV0101_064410 + 0 NULL GK000001.2:58771765-58790853 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003425 TCONS_00003427 TCONS_00003426 TCONS_00003428 1 XLOC_000858 Coding TCONS_00003428 XLOC_000858 Coding Coding KIAA2018 1:58784616-58837488 j TSS1757 13317 1 TCONS_00003428_12 2228 0.0526394833671247 7 0.748255187153638 1.91047257696667e-11 6.2153559689289e-09 9.29014763970541e-05 5.42254213264727e-07 0.000133095239660393 7.26791756031009e-11 5.47194572786343e-05 1.45844098198274e-10 2.21152824974477e-14 9.8984582450773e-05 9.37561330512369e-11 0.000122952807397945 2.58400092294631e-12 9.51030926516299e-05 0.000253322356660064 0.00198775712123366 3.13072194929569e-05 0.000261203473856229 3.11372454490579e-12 6.84059913258153e-05 2.05880702535769e-07 0.00117833189919316 5.92206099899957e-07 1.10720263315742e-06 4.55341963416264e-07 1.22421675814273e-06 5.63021528813204e-05 6.05080688442461e-05 6.38025889171229e-05 0.000143499426233596 XM_005201359.1 KIAA2018 PREDICTED: Bos taurus KIAA2018 ortholog (KIAA2018), transcript 0.0 1.487e+04 100.00 0.619208530449801 NM_001009899.2 KIAA2018 Homo sapiens KIAA2018 (KIAA2018), mRNA. 0.0 9548 87.02 0.581061800705865 TCONS_00003428_12 sp|Q68DE3|K2018_HUMAN K2018_HUMAN Basic helix-loop-helix domain-containing protein KIAA2018; 0.0 3649 87.06 0.999551166965889 0 coding 0 0 0 0 -0.116610490373634 0.806590910241569 -0.0182220568796546 0.707459363465403 GGCCGCGCTGCCGCCGGGTCTCCGGCCTTGAGGGCTCGGGCTCGCAGTGGCGGCGGTGGCCGCTAGAAGAGGCGGCGGGGGCGGGGGGAGAGGAGGGCCTGGGCCCGCGCTCCCCCAGCCCCAGAGAAGCAGGCGGCGGCCGCGGACGGAGAGATTGGCCCGGGCGGTCGGACACCCCTGCGGAACCCGCTTGGGATCATGACCCAGGCTGGGGTCGCCGCTGCCGCCGCCGCCGCGGCCGAGACCACGCAGCCCGCGGTAAGAAGAAAACATAACTTATAGACCATCTTCTGGCAGAAGATGATAGATTTGGATCAGAAACGAGAGGCGTTGGAAGCCAGGAATCAAAAGTGAAGAGATTCTGCAAGCCCTTGGGTTCCTATCACTGTAACCATGCCAGAAATGACAGAGAATGAGACTCCTACAAAAAAGCAGCACAGAAAGAAAAACCGGGAGACACACAATGCAGTGGAGAGGCATAGAAAGAAGAAAATCAATGCTGGGATAAACAGAATAGGAGAGCTGATCCCATGCTCTCCTGCACTGAAACAGAGCAAGAATATGATCCTGGACCAAGCCTTTAAGTACATAACAGAATTGAAAAGGCAGAACGATGAACTCCTGCTTAACGGAGGAAACAATGAACAAGCTGAAGAAATTAAAAAGCTACGTAAACAACTGGAAGAAATTCAAAAAGAAAACGGCCGATATATTGAATTACTAAAAGCAAATGACATATGTTTATATGACGACCCCACAATCCACTGGAAAGGAAATCTTAAAAATTCAAAGGTCTCTGTTGTTATTCCCAGTGACCAGGTTCAAAAAAATATCATTGTTTATTCCAATGGGAGTCAGCCTGGTGGAAACAGCCAGGGAACAGCTGTTCAGGGGATAACCTTTAATGTTGGTCATAATTTACAAAAGCAAACTGCCAATGTGGTGCCAGTGCAGAGGACTTGCAATCTTGTGACTCCTGTGTCTATTTCTGGAGTTTACCCTTCTGAAAACAAGCCATGGCATCAGACCACGGTTTCTGCATTGGCTGCCAACCAGCCTGTTCCTCTTTGTCTTCCTGCTGCTCTTTCTGCTCAAAACATTCTTGAGCTCTCCACCTCCGAAAGTGAGTCTAGTGTGCTTGGTCCCACCAGCAGCTCACTGGTCGCTGTTCCTGTTGGGCCTGAACCACCCCAGCATTGTTCATCGCACACGTGTCTAAATGATCAAAATTCTTCAGAAAATAAGAAGGGGCAAGAAAGCCCCCAAGTATTGAAGAAAACGGTCCCTTGTGCCACAAGCATCTCCTCCAGCTGCTCAGCAACTGCCACTCAAGGACAGCCTGGAAGCGAGTCCTGCCGGAGCACACAGGATCACAGAAGTGATCTTCAAACCACCCTGGTTGTTTCCGTCACCACCGCAGTCTGCTCCCAGCCTCCCAGACCTGCTGGTGATTCTTGTATGGCAAGCAGTAGCAAGGGTGCAGACTCCGCAAGTGTTACCATGGTGGTGGCCCCGTCTGTCCCTGGAGGAGGGATGATCACCATGCCTGTAAGCACCCTTTCTGCAAACCCTATGGACAGTGGTTGGACTCTTTCTTGTTCTTTGCCTTCTTCAGCTGTCAGTACTGCAGATTTGAAAAACATGAATAGCCTTACCCGAATTTCCTCAGCTGGAAACACACAGACAACGTGGACTACTTTGCAACTGGCGGGAAACACTATTCAGCCCTTAAGCCAGACACCGTCTTCTGCTGTGACCCCGGTATTAAATGAGTCTGGCACTAGCCCCACCACAGCCAACCACAGTAGATGTGTGGCTCCAGGCATCAGCTTGAATAATTCCTTTCCAGCAGAGGGGCAGCCAGTGGAGCAAGTAGTTGTAACCTTGCCTTCCTGTCCACCTTTACCTATGCAGCCACTGATCACCCAGCCACAAGTTAAGTCTCAGCCTCCAAAAAGTATCCTCCCATTGAATTCTGCCATGCAGGTGATTCAGATGGCTCAGCCAGTGGGGTCAGCTGTTAATGCAGCTCCTGCTAATCAGAATGTTATCATTCTTCAACCACCCAGCACCACCCCGTGCCCAACAGTGATGAGGGCAGAGGTTCCCAACCAAACGGTAGGTCAGCAGATAGTCATCATCCAGGCAGCTAACCAGAATACTTTGCCACTTCTCTCTGCTCCACCTCCCGGTTCTGTTCGACTCCCTGTCAATGGAGCCAGTGCTATCATAGGATCTAACAATTCAGTGCAAAATGTTTCCACCCCGCAGACTTTTGGAGGAAAGCACCTTGTCCACATATTACCACGACCTACATCTTTATCAGCGTCGAATTCCACACAAACTTTTTCTGTTACTGTATCCAGCCAACAGCAGCCTCAAACCATTTCTTTAAATGGACAGCTCTTTGCTTTGCAGCCTGTGATGTCTTCATCAGGAACTACAAATCAAACCCCTATGCAAATTATTCAGCCCACCACCAGCGAAGATCCAAATACCAATGTTGCCCTGAATACCTTTGGCGCTTTGGCCAGCCTCAATCAAAGCATATCACAGATGGCTGGGCAAAGCTGTGTACAGTTGTCTGTTAGCCAGCCAGTCCATCCTCAAACTGCTGCAAATAGTCAAATCACCCCAGCTAACTGTGTTTCATTAACAACTGTAGCACCTCCCATGACAACAGATAATTCAGCCACACTACCCAGTACTTACAACCTAGTGACTACTCCCTCAGTGAACACTGTGGCTTGTGTGCCTAACACGAAGGCAAAAAGGTTGAATAAGAAGCCGGGTGTCAAGAAACACTTAGCCACTAACAAGTCAGCCTGCTCCCTGAATGCAGTCAGAGATGTGGGCAAGTCAGATGGCCCCAGCACTGAAGGTTCCGCAGAGCCATCATGTAATGATGGACTTCTGGAAAGCCTCCCTGGTGTGTTACCATCTGCCATTGTGTCCCAGACAAATAGTGTAAGTGTTTCTGGTTCACATTCTTTGAATGTTCTGAATTCTGAATCAGTGATGCCTGAGTCTGTACCCAAATCTAAGTCAGCCGAAGAGTCTAGCCCACCCTCCCAAGAATCTGTAACAAGTGAACAATTTACAATGGCCCCAGCAAAATCCAAAGATTTTCTCCCCATTTCACAACGAGAGACATCTCAGGATACGCCACCGAGTAGTTTGGCATTGCCAGATGCTGCCAAATCCTGCACGTCAGCCAACGTGTTGATTTCCTCTGCGGATGATGCCCCCGTTTTGGTCTCTCAGGTTTCTCACTTGTCATCTACCACGAGCACTACAAGTACTGACTGTGTTTCTGAAGTGGGAGTCATTGCTGACCCTTGCAGGGTTCAGCAAGCGTCATCAGATACAGTACCAACCACAGGTCTCTTAAAGGGGCAGGGTTTAACTGCACTGCTCTCTGGTCTTGCTAAAGAAAAAGACCCTCAGAAATCATCTCTTTCAGTCCAGGTGGACCATCCTGACTTTTCTTCAGAAAATTCTAAAATAGTTGATTCAAATGTTGAGTTGCATCCCAAACAGGAGCTATTACTGATGAGCAGTGATGATAGAGACCCAGGACAGCCTCATTCGTGCATCCCTGACCAGGAGGTTATTAATGGTTCTTTGCTCACCAGTAGGCAGGCTGACTCTCCCATGTCGACCAGCTCTGGCAGTAGTCGTAGTTTCTCAGTTGCATCTATGCTTCCTGAAACAGCCAGAGAGGACGTCACCAGCAATGCAGCGACTAATACGTGTGACAGCTGCACCTTTGTGGAGCAAACTGATATAGTTGCTCTTGCAGCACGAGCTATTTTTGACCAGGAGAACCTTGAGAAGGGAAGAGCTGGTACTCAGGTACCAGCTGATATACGGGAAGTTCCTTCAAAGCCTTCTGAAGCATCCTCTTTAGAGGGAGACCAGCCTTTCAAAACACAGATATCTAAAGAGAGTGGTCCAGGACAGGCAGAAGCAACACCAAATGAATTTAATTCTCAGGATTCAATTGAAGCCACTGTGGATAGGCCCCTTGAAAAACCAAGTTGTTCTGTAGGAATGAAAACATCAAATGCCTCTTTACAGGTTTCGACTTCCCAGCCACCAAGCATCACCAGTTTAAGTGTGAATAATCTTATTCACCAGAGTACCCTCAGCCATCCTCTGGTCAGCTGCACTGGTTTATCCCAAACTTCAGAGCAAACAGCTGTTCCTACAACAGTGAATCTGACAGTTTCATCTGGTTCCTATGGCAATCAGCCTCCTGGACCATCCCTGATGACTGAATACTCCCAAGAACACCTAAATACTATGGCTGGTACTGTACCAAACACACCAATTCAAGAGCCGCTCTTAAAGCCAAGTCACGAAAGCCGTAAAGACTCTACTAAACGTGCTGTCCAGGATGACCTTTTACTGTCTTCAGCTAAACGTCAGAAGCATTGTCAGCCAGCCGCCCTCCGGCTTGAAGGTCTGTCCCTGATGAGCCGAACTCCAGACAGCATTTCCGATCAAACTCAAATGATGGTTGGTCAGATTCCTCCCAACTCTTCAAACTCAGTTGTGCCTATTAGCAACCCAGCACACGGGGACGGCCTTACTCGATTATTTCCGCCTAGTAACAACTTTGTGGTCCCCGCATTGAGGCAGACCGAGGTTCAGTGTGGTTCGCAGGCTTCCATTGCTGAACAGCAGCCAGCCCAGGCCGGCCAACATCTGCAGGCCCTGCAGCAACATGTTCCAGCTCAAGGGGTACCTCACCTGCATAGTAACCACGTCTACTTAAAGCAGCAGCAGCAAGCAGGGCAGTTGAGAGAGAGGCATCACTTGTATCAGCTGCAGCGTCACGTACCTCACGCAGAGAGTTCTGTCCACTCTCAGGCCCACAGCGTCCACCAACAGAGAACCCTGCAACAGGAAGTTCAGATGCAAAAAAAGAGGAATCTTGTTCAGGGCACTCAGGCCTCTCAGCTGTCTTTACAACCCAAGCATCATGGAACTGACCAATCCCGACCTAAGAGCGGTCAGCCGCACCCGCACCATCAGCAGATGCAGCAACAGATGCAGCAACATTTTGGAAGCTCCCAGGCAGAGAAGAGTTGTGAAAACCCTTCCACCAGCCGGAACCACCAGAACCACCTCAGTCAAGATATTCTGCACCAGCAGGAGGTGGGAAGCCGGCAGCAAGCTCCGGGGGTTTCTTCTGAACACGTATCTGGGCATAATCCAATGCAGAGGCTGTTGACATCAAGAGGCATAGAGCAGCAAATGGCATCCCAATCGAGTATTGTGACGAGACCTTCAGACATGACCTGTGCTCCACACAGGCCGGAGAGAAACAGAGTTTCAAGTTACTCTGCTGAGGCACTCATTGGAAAAACATCTTCTAATTCAGAGCAGAGAATGGGTATATCGATTCAGGGTTCCAGAGTTTCAGATCAGCTTGAAATGAGAAGCTACCTTGATGTTCCCAGAAACAAGAGTTTAGCCATTCATAATATGCAGGGTCGTGTGGACCATACTGCCTCAGATATCCGCCTTTCTGACTGTCAGACATTTAAACCAAGTGGAGCCAGTCAGCAGCCCCAGAATAATTTTGAAGTACAGTCTTCAAGAAATAATGAAATAGGTAACCCTGTATCATCTTTGAGGAGTATGCAGCCCCAAGCTTTTCGTATTAGTCAAAACCCTGGTCCACCACCAGTCGACCGCCAAAAGCGATTACCTTATCCACCAGTTCAGAGCATCCCAACAGGAAATGCTATCCCAACAAGGGACAATGAAAATACATGTCACCAAAGTTTCATGCAGAGTTTACTTGCCCCTCACCTGGGCGATCAGGTCATTGGAAGTCAGAGATCCCTCTCAGAACATCAGAGGAATACACAGTGTGGTCCCTCCTCTGCAGTTGAATATAACTGTCCCCCGAGCCATGAAAGTGTCCATATTAGAAGGGACAGTGAGAGTCAGAGTAGGGAGAGCTGTGACATGTCCCTGGGCGCAATTAACACCCGGAACAGCACCTTGAATATTCCGTTTTCAAGTTCTTCGTCTTCAGGAGATATTCAGGGTCGAAACACGAGTCCCAATGTTTCTGTACAGAAATCCAATCCCATGAGGATTACTGACAGTCATGGGACCAAGGGCCACATGAACCCTCCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCTTTGCCGCATCCGTCTGCGTCTCACGGAAATGCTGACCAAGGGCCTCCTGTACGTCAAACCAGTTCTTCAGTTCCCCAGCGATCAAGGCATCCGTTGCCAGACAGCGGCGGTTCCAAAATTCGTCCACCTGAAAGGACTCGCTCCGGAAACCCAAGACATAGCAATGTCTTCGATCCAAGTCTTCCTCACCTTCCTCTGTCTACTGGCGGCAGTATGATTCTTGGACGCCAACAACCTGCTGCAGAAAAGAGAGGAAGTATTGTTCGTTTCATGCCAGATAGCCCACAAGTACCTAATGATAACTCAGTGCCTGACCAGCACACACTATCACAAAATTTTGGTTTTCCTTTTATCCCCGAGGGTGGCATGAACCCGCCAATAAACGCTAATGCTTCTTTCATTCCACAGGTTACTCAGCCTAGTGCCACTCGAACCCCAGCCCTCATCCCTGTGGATCCCCAAAATACTCTCCCCTCCTTCTATCCCCCATACTCTCCTGCTCATCCCACACTGTCCAATGATATTTCAATCCCCTATTTTCCTAATCAAATGTTCTCAAATCCCAGCACAGAGAAGGTAAACAGTGGAAGTTTGAATAACCGATTTGGATCAATTCTGTCTCCTCCCCGACCTGTTGGCTTTGCTCAACCGAGTTTTCCTCTTCTCCCCGACATGCCTCCAATGCACATGACCAACTCTCACTTATCCAATTTTAATATGACATCTTTGTTTCCAGAAATAGCTACAGCTCTTCCTGATGGCTCAGCGATGTCCCCTTTGCTTACGATAGCAAACTCCTCTGCCTCAGACTCTTCCAAACAGTCCTCCAACAGACCTGCCCACAACATAAGCCATATCTTAGGTCATGATTGCAGTTCAGCTGTTTAAATACCGATTGACTAAACATAAGTGTAACGAGTGAGATTACACATGTATTTGTATGTGTGTTCACACATACATGCACAGGAAGAGAGAGAGTGTGTGAGTGTATCTCCTTGTGTTTGTTTAATCAGTTGCCAGTTATCTTCTGAATGTAGGGAAGCCATGTCAGAGATGAGGCACATACTAGGTTGTCAAAAAAAATTTATCTTTCATTTTTAACTGCACGGTGTGCGCTTTAAATTGCCCAAGCAGACTGACATTTTCAGGCTTGATTTATAATCTGACATTCTCTAGATACTAATCGACTGGAAGGTGGGAGAAGTCATCCTGGTGTCATCACCTAGATTTTAAATTTGATTGTTGACAATTTGTAAAATAGATGATTGAGATAGTGGAGTTGCTCTCCAACAATACAGACATTTCAGTAGAACACAGTGGCTTGTAACCAAATGCTGGCCAAGTGTATTCTGGAACAGTCTCTTACCCATGGCAGGTGTTGAATTAATGTAGAATGAATGTCCGTGATTCAACTCAAGCAGTTAGCAAATAGGTGAGTTATTGAATCAAGCTTTATTCCCAAGGTTTGGTTTAGGTAGAAGCTTCTTCCTTAATTATAACAATTCATAAATTATCTGAATTCCATGTCTTGTTTTCCAAATTAGGGAACCGTCAGTTCAGTTTAGTTGCTCAGTTACATACGACTCTTTGCGACCCCATGAACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTTACTCAAGCTCACGTCCATTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTTTTGTCCCCTTCTCCTCCTGCCCTCAATCTTTCCCAGCATCAGGGTCTTTTCAAATGAATCAGCTCTTTGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAATGAATATTCAGGACTGATTTCCTTCAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCGTCAATTCTTCTGCGCTCAGCTTTCTTTATAGTCCAGCTCTCACATCCATACATGACTACTGGAAGAACCATAGCCTTGACTAGATGGACCTTTGTTGAGAAAGTAATGTCTCTGCTTTTCAATATGCTGTCTAGATGGGTCATAACTTTCCTTCCAAGATGTAAGCTGCTTTTAATGCATGGCTGCAGTCACCATCTCCAGTGATTTTATCCTTTAATGTGCCAAGGTCCTGTAAAGCAAAGGTCTTCCTTAAACAAGTAGCCTTAAAAGTGGAAAGCTAAACAGCAGAGTACGTAGATGTTTTCCATTTTGTCCTTGCATTTTGCATCAGGCCATAAGGATGATAGCCAGTTGTATTGTGAGGTTTTGCATGTGTTCAGTTAAGGATTGTTTCACTCATTGAGTTTTGTTGTAGAATTCTCTCTTTGTTCTATTTGATCTTGAAATAGGTTCTTTGGTATTTGTTTAATCATTAGGGACTGATCACTTAATAGTGTGTTTGGAATCAACAGTTATTTGAGCCTTACTTTTCAAATATTTCTGAACAGAGTCTTAAGCTCTGTCAGTATTTTCACTTACTGGTATTTATATTCAAGATATGGCATTGTATATTGCATTATTACCCTTCATTGTAGACTTACAATGAGAGGATGAATTTGTTCATTGCTTTTCCTGATGGTAGATGTGAAATGGTGCTTCAAAAAATTGTCTTTTTATAAGTTCACGTGTGTGAGTGTGTGTGTACTTCGACATAGATTTTAAGGTATAAACTAGCTCTTTCAAAATAGGCCTGCGATCTGAAAATAGGAAATTGACACCTGAGACCTGCTGAAGAGTAGAACTTGATATAGAGTTGTTTTTAAAGCCCCACTGAAGTTAAGAATGAATTTTGAATTTTAAAGATATATATTCAAAATTCATGTATTGCATTTTGAAAACTTTATTAAAAGTTAAGAAAACAGTTGATGTGTACTCATATTTCAAGCCCATTGCTTGTTGTTATATTCTGCCAAAAATGGAATGGAGTGGGAGATATAAACTGTTCTGTCTGCTCTGTTAACAAAGTTAACCCACGGACCAGTGTTTTGGTTTTATTCTCATTTGGGAAAAAAAAAAAAAAGCCTCCTAATGCTTGGTTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGGAAATCCCATGGACAGAGGGGCCTAGCGGGCTACAGTCCATGGGATCACAAGAGTCAGACAGGCCTGAGCGACTGAACACACACAGAAGGCTTGGTTAGAGCAGCTAACTCTAGTGAATACCTCTACTACAGCAAAAGGGTCTCAGCAAAAGGGTCATCTGTGCCTCTTTCGCTGTTCTTACCAAACTCCCCTGCTGCTGGCGGAGGCCGCCTCCTCGGCGCAAAAAATATACTGAAAGAAAATGTCTGTATTTTCTTCCTTCAGAATGGTCATGGGGAGAAATAGGAGAGCTTCATGAAAAAGTTACTTAAGAAAACAGGTAAACAGTTAAAACGTTTAATTGAGAAAAAATATGACATTTATAACTTATTTTAACTGAATTTTAAGCTTTAACATTCAAGTTTTTCCTTGTACTTGAAAGGTCTAATCTGCCAGTTTCAAGAACTGTTCTTAGAGTGTTCAGCTATTCATCCTCTCTCTCTCTTTCCTACCTTCTCTTCCTCTCTTTTCCCTCTGTGCACGCACGTGCACTCACACATACGCGCACACGCAGTGGCTGTTGAGTTCTGCAAAACTGGGGACTGTTAGGTAAAATCAGAACTAAGGTAACAGGCCAAGGAGAAGCTGAATTTGAACATTCAGTGGAAAGGCCTCAAGCCTGGTACTTGCAAGTATTTCTCTGTTGTCTCAATTGTATTTTTCTGCTCAGCTCTCTTCAGAGATAATATTTACATTCCTCAGAACTTTCATTCCAAGCGTACAACACTTTGATTCCAAATGAGTCTCTATCCCTAAGTAAGGCTTATTTGACCCTCTGAGGAAAAATGTGACCATCTGCAAATAATTTGGCCCCTGCTTCCATATAGCTTTAATTGTCTTACAGACAGATGCATACGTATGTGTTTATATACAAACTCAATTCTGAAAATGTTCAGAGCACAGTAATCTTACTTGATTTATAAGCATGATTATATGAGGTTTAAGCAGTATTAAGTATTTGATAATTAGAGCTACATGAATTGGGCAAGGAAATTTATCATTTAATATATAACAATATGGATTTTTTTTTTTGGCAAACATGGCAGAGAACATAGTTTTGGTTATAGTAAATTTAATGTTATTCGTGGCTTGCTAATATATGTCTACAGAATGTAAAATCATTTCTACAGATAAATTTGTAATCTAGAAATACACAAACATGTATGAAGCATAAGTGAATCATTGATTAAATAATTTCTCTCATAGTGTTATTGATCACCTGGAATCAATTTCAGGAAGATGTTGATTCCTCTAAACATTTAATACAGCAACTTCTGATAGGGTAAAAAATTTCATATTTCTTATCATGCAAAAATTTCTAATGTGTCAATCATGGATAAAAGATGTCATTTCTCTTTTTGGTACATAAAAGTTGTTTTGGGATATTTTATACTATTCCAGGAAGTTTGTTTTTGTTTTTATGTTAAGACCTTTGGGGTGTTCCAGCAATGGTACCCTTTTTCTAAGTAGAGAGTGTGCATTCCAGAGGGATCATGCAGTAAAGAGTGCGCATTCCAGAGTGATCATGCTTTATAAAACTTAATGTGTCAGAACTGTAGAAAGAGAAGAATGAGGAGGGAATCTTCAGGGTGAACTGCAATGAGGATTTGACTCATTTTAAAATTAGCCTTCTTAATATACAAATTATTTAAATATTTTAAAGATAATTCATTTGCCCTGCTCTTGCCTTCTAACATTAGCCATTTCATGGAGAGGCTGATATTTACACTCCAAAAAAGTGTGGAAATACATTTTAATGGGAGTGATGTTTTTAGAACTTGAGAAAAGATTATGACTCTTCTTAGCTGTATCCTTCCTTTGATGCAAAGTACCTAGGCTCTTATTTTCTTCTGTCTGCTCCATGTCAAGTGGCAGGGAACCCACTCATTCCTTAGCAGAATGATTACTCCTCTGCCTTGAAACATTTATTGGGCCCAGCGTCATTGGATCAGTGCATAATAGCGACTCATACTCCCAAATCAATGATTCCCAAAGACCTAGCTTTGGAAATCACTGTATTCTATTAAGGGGCAAAGAGAATTCCTCAAAACAAAAGTAATTCAAGATTAACTGAAAATATTTAACGTGCCATATAGTTTTGTTCCTTGTTTTGGAGAGCTTGTTTTTTTTCCCCCATGGAGGAGTAAAGAAAGGGCAAAGGTGGTACCAAAATCAGATGGCTTTGGGTTGATATCCTTAGGAACCTGGCAGTCATTGTTCTAATTCTGCTCTCTCCAAATCTGCATTTGTTGATCACCTATGGCTGTGTACTTCCAGAGGGCAGTAATAGTAAGTGATGGTTTTTGATACACTTATGCAAATTAAAGGCCAGAAATTAGTTCTTCTCTGATAACTTTTTGGCTGAATGAAACCATTTCTCCTTCCCCTGTGAGTTCAACAGGAGAGGGTCCTTTATTACTTAATCATATTCTCCCTGTATTCTACACTTCTGTGTGAGCCTAAGAGTGTTTCTACTAGAGTCTGTGGGGGTCATCAAGTTCAGATTGAGGTGTTCTGGGAAGAAGTGTTGAGGACCTTCTTAGACACAGAACTTCCAGTTGTGCCCACATGCCTCTCCCCGGAAACTGCACTTTACCTGCAACTGTGCCTCTGGTCCTAGGACCAGCCATTGGAACATACCGCTCACCCACTCCTCTGTTCCGGCAAAGGACCAGCCTGGTACACGCTGTGTAATCAAACACCTAGATGACAAATACAGCTGACGTTTCTCACTGTTGCCTTATCATTCTCTGAGCCATCTTTAATGCTGATCTTAGAAAAATTTACTAGTTAGATGCAAGACTCCTTTTAAACTCAGAGCTGGTATGTGGTGGCCATTCAATATTCTTATTTCTAGATTTGCACAAACCTTGTCAACTGTAGTCTTTTTCTGGTGCATGCATGTGTTCAGATGCTTCATAAACAGCCTACCCGGGTTGAAAATGTTGGGGATAATGTTGAAAGTGGTGTTATTTTGGATGACTACATAATCTGTCACTAGGAATTTCATGAGGCATAGGAGATAAGTCTTCATTTGTAATTTGACATTTAAAAAAATAATTCTTTTTTCCCCCTCAGTTGTTACGTACAGGTATACACCATACTATGTCATAGGAACTTAAAGTTTACTCCATGTCAATCCCCTCTTCACTTTTCTAGATCTCTATTCCCCCACCCCCTAAGTCTTAAAACCATTTTTTATCTGTGAGGTCACTGAGGCACTGGACTTGACTATATTGGTAACTTTTAGGGGGAATTGAACTGTTGATCTTCCAAAAGAAAGGGACCAGACAGTGTTGCTTAAAATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTTGCTTCCACTTTCAACAGGAGATATATATATATATATATATATACACACACACACACACACACACGCATATACACATATATATTCATTTCAGTAAAAGTGGGTGGAGAAGTCTGAGCACATAGTTACCTTCACACATTATTTATAGATACACTGGGTGAGAAGCTTACTGTAGGGCAGTCACCAGAAAAAACCTAACTGTAGTGCTTTCAGTATATGTAATATTTGTATCTATTCCCATGCCAGCACTGTCTGCTGTGCACTGTGTCCTATTACTGTAAATCACCTGGTTTATAATTCTAATGGGAACTAATTTGTTTTGTAATGAATTCAGAGCAGATATGTATAATATGGCCAGGATTGTCCTACAGTTGTAAATAAGAATAGGTCCTGTTTATTTTGACATCTTTTTACAAATGCATTGTATTAGGGTGTGAATATTCTGAACCATGCTCTTGTTTAAAGTTTTGAAATTTTTATTGGTAAATGTAACATTTTAATGGTTGTAATAATTATTTGTATAGATATGAATATAGTATTTTATTTAAGAAAATAAACTTTGCATTTTTGCATTGTGAATTCTGTCTTTTCTGATCATTGCATGTACCACTTCAAACTTGGTATTAAAATGATTTGCCTTGCATGCTGA EMBV3_23813 GGGAGGGATGGCCCAGCCTGTAAAATACTGTATATGCGCTGCTGTAGATACCGGAATGAA Gene GeneID:782359|LOC782359:XM_002695182:842_cdna Constitutive 0 NULL GeneID:782359 18 GENE LOC782359 NULL similar to BCL2 binding component 3 EMBV3_21418 GGAATGGATCCTTGACTTCAGACTGTGAGATCTTTTCCTCCAGGACTCTCCAGAGGCAGG Gene GeneID:100297703|LOC100297703:XM_002694503:390_cdna Constitutive 0 NULL GeneID:100297703 17 GENE LOC100297703 NULL hypothetical protein LOC100297703 EMBV3_35642 TTTCAAGCATAAAACCAAGGTATGGTCCCTCACGAGCAGTTCCAGCCGCCAGGCCAACGT Gene GeneID:528174|GPR133:NM_001034564:111_cdna UTR3_Alt 3 NULL GeneID:528174 17 GENE GPR133 NULL G protein-coupled receptor 133 EMBV3_04760 GTACATGATTACTACAGTTCAGAGGTTCTCCACCAGAAGGGGATGTGGGGATGTGTGGCT Gene BVV0101_069407 + 0 NULL GK000016.2:55154557-55240170 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35295 CGTTAATGAAGGAGAAGTTGAGCCAGGGCGTCACCCTGGTTGTGGACAGATACGCCTTCT Gene GeneID:506946|DTYMK:NM_001098893:17_cdna Constitutive 4 NULL GeneID:506946 3 GENE DTYMK MGC148989 deoxythymidylate kinase (thymidylate kinase) EMBV3_29949 GGAATTTTATCTTGCCCACTGGGAGCATGTACATGTAACGGTCTAAGATGACTGAAAAAC Gene BVV0102_140079 + 0 NULL GK000020.2:33747494-33762477 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113762 TCONS_00113761 TCONS_00113757 TCONS_00113760 1 XLOC_069116 Coding TCONS_00113760 XLOC_069116 Coding Coding TTC33 20:33722079-33751673 = TSS85027 5407 1 TCONS_00113760_5 262 0.162567042722397 5 0.817456831007333 0.000263079233199741 1.41939774122013e-05 1.7033197109971e-05 0.000136286587608637 2.87704931490075e-05 8.64530893674516e-08 3.98585754727439e-05 5.22942790425909e-05 2.65397956838842e-05 7.69650548470271e-06 1.91244280779034e-12 1.74507866534981e-14 2.69356682520697e-48 1.88797194859172e-09 7.88454815281799e-06 3.97299825305532e-05 7.15138702997443e-09 0.00157268043254629 3.50870288628038e-05 7.58840411910453e-05 1.7918052222683e-05 5.30102657604348e-10 0.000266141938939127 0.000579023595398125 5.85858009892277e-05 2.87354269523658e-25 9.51924005815053e-15 3.57818154818122e-05 1.27554448772218e-19 0.000126570826120164 NM_001192705.1 TTC33 Bos taurus tetratricopeptide repeat domain 33 (TTC33), mRNA. 0.0 2214 100.00 0.226743110782319 NM_012382.2 TTC33 Homo sapiens tetratricopeptide repeat domain 33 (TTC33), mRNA. 0.0 2232 78.50 0.497688181986314 TCONS_00113760_5 sp|Q6PID6|TTC33_HUMAN TTC33_HUMAN Tetratricopeptide repeat protein 33; 0.0 514 93.89 0.99618320610687 6 coding 0 0 0 0 -0.00407048111501497 0.976044510949537 -0.0115974649995971 0.839443639436079 CCGGGGAGTGGTCTTCGGGTAACACAGGCTACGGTTTTTCCAGAATGGCTTCCTTTGGATGGAAAAGGAAGATCGGTGAGAAGGTCTCAAAGGTCACATCCCAGCAGTTTGAAGCTGAAGCTGCTGATGAGAAGGATGCAGTCGGGAAAGATGAAGGCAACTGGCTTCATGCTGTTAAACGGAGGAAAGAAAGTCTCCTTGAAGGCTGTGCCGAGAAAAGCAAACAGCTGAAGGATGAAGGAGCCACTCTGGCTGAAAATAAAAGATACCGAGAGGCCATTCAGAAGTGGGATGAAGCACTACAGTTAACCCCAAATGATGCTACCCTGTATGAGATGAAATCACAGGTCCTAATGTCTCTTCATGAAATGTTCCCAGCAGTTCATGCTGCAGAAATGGCTGTCCAGAGAAATCCACATTCATGGGAATCTTGGCAGACTTTGGGGCGTGCTCAACTTGGATTAGGAGAGATAGTCTTGGCAATTCGAAGTTTTCAAGTAGCCCTTCACATCTATCCAATGAACCCTGAGATATGGAAAGAAGACCTTTCTTGGGCAAGAACACTCCAGGAGCAGCAGAAAGTAGCAGAGAGGATTAAAAAGAGTGAAGTACCAGCAGAAGTAACACATTTCTCACCCAAGTCAATTCCTGACTATGACTTTGAAAGTGATGAGATTGTTGCTGTTTGTGCAGCTATTGCTGAAAAACAGAAGACAGTTGCAGCAAATAAAACAATGGTTATTGTGTCAGCTTCTGGGACTGTAGAGACTGTGACCGAGAAGGAAGATGGTGCTGCACCACCGGATGCCTCTGTTTTTATCAAAGCCCGATGAAGCTTAGCAAGAGTCCTTTGAATCCATCTTTGATTACCACTTAAATTTTAGGCGTGGGGGCTTTTAGTCTGGAGAAACAGGGTAAAATTCCTGCTTGTTAAATAAGTTTTTCAGATGAGACATATAAAACTTAAGTGAAAGAATTATTGTATAGTTTTTGGACTGTACTTTGATGAGGCATGATTTCAGCTCAAGATTAAAATTGAGTACATGGTTTTTTGATTAAGAAGCTTAATTTAATCAAAATATATAAGTGAATGCATTTTCAAGATACCACTTGAAAAGCAAGTTCTCAAATAGTGAATAACTTGATGGCCAGTGTTATTAAAATATTGACTTGTTGATTTTTGTTTTATAATAAAGGAAGTAGGCTTCTTTCCCTGCTAGAAATATACCGCTATTCCTATTCACTCTTCTTTTTCTCTTGTTTCATTAGAGTAAGTCCGTCACGAAGCTTGAATCTTTTTGATACTCATTTTGATTCAGAGTTGTCATTTGGTCCTATGCAGGATCTTGAAAGTTTGAAAATGCATGCAAATGTGTATGCTGAACATTTTATGAAGTTTCTCTTTTGATTTGTGCTTTTAACTTTATAATTATTATAACAATGATAGTTGCCACTTTCAGTATTTGTTAGATGTGTGAGATACTGACAAATGTCAGAATCATGGTTTATTTTTTAAATTATTAAGGTAGATAGAGTAATCCTTAGCACCAAGTGAGTCATTTTAAAGATGTGCATTTTTAAAAAAAATCAGTGGCTCTTACAGATAACATCATAACAAATTACACTACTATTTTCCCAGTCAAAAGCAGTATTTTCTTTTCCTTATTTTTAAAAGATTAAAAACAATTTATTTCTTGCTGTAATTTCCTAGCTGATGGTTTAGAATTCCTTTTCTAGTTAACTTTTATGGAACTGCTCAGTGAAATGAGAAACAATCACAATTTTAAATGACTCAATTATACTTTTCTAAAAATTGAGGGGGAAAAGTAGATATGTTATTGAAATAAAGGAGTGAATAACGTTAGGCGCAACATACACAGAAATTGAAGTGTGATTTATGGTTTAATCCCATGAATAGAAAGGATATATTGAAGGATATATTTCATTGAAAGGTCACCATCACATCCACAAATCAGTACTGACATTGCTAATGTTAATTATTATTTTAGTACAGTTATATAGAACTGCTGAGTACTGTTACTTCTGAAACTCAGGAAGCTAGTATTGGTATTTTATCCTTGTTAGAGAGGAAGTAAGTTACTTTTTATTTTAAGGAATTTTATCTTGCCCACTGGGAGCATGTACATGTAACGGTCTAAGATGACTGAAAAACATTTTTTTTAGTGGAATGCTTACTTCTTTTTTTCAGAGTTGGAGAAGCCAGCATTTGCCTTGAAAAGTACTATTTTTCCCCCCAAAGTTATATCAGATAGTTAGCTCTGGTTAGAGAAGTTTGTTTTAGAAAGATCAAAAAAAAATTAATGATATTTTATTTTGTTAAATAATGCATATTCTTCAAGGGCAGGTAGATGGTGTGTAGATAAATGTGCACTTACTGTTCCATATGTTGTTTTGAGTAATGGATGTTGATTGTATAGTTTGTGAATAAATAGGGTTTTTTGCTTTTAAAGGTTTGCCTATTTGTGTTGTTAGCTTTTGAAAAAATTAGATTGATTAATTTATTTCTTATATGAAGACAAAATATATAAGGCACCTTGTATGGTGTTTTGTGTATGAAGTACTCAGTAAATGTTAGCTGTTTCTATGAAGCACTTGAATTGGTTTTATTTAACCTCACTTTCTTCTGATTTTAAGAAAGGAGGAAAACTTCTTTGTAATTTTTTCCGTACTTGGAAGTGAGAAGTCACTACTTCTGATACTATAGGACAGATGGCTTTCAGTTGGGGAATGTTGTTGGTATAAGGTTTATGAAGTGAAGTGAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCCACCAGGCTCCTCCGTCCATGGGATTCTTCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCGACCCAGGGATCAAACCCCGGTCTCCCACATTGCAGGCAGATGCTTTAACCTCTGAGCCACCATACCTCAACCCAAAAGAAACAAGATCCAGGATGGGAGTGCGTGTAGCTACTAGATTCTGTTTATGAACCTACTGCTGCCTCTGTACTGACATCAGTAGGCCAGGTTAGTCTCTTTCTTACACAGAAATAAGACATAAGATGGTTTAGATGCAAGATGGAGGAGAGAACGAAATAGTGAATTATGGAGGAGAAAGGGATCTCATTTCTTCAGGCCCCCCAAACTGCTTAGCACTCTTGTGTACGAAGGGAAAAATGCATACATTATTTTATAAGGATGTGAATACTGATAGATCTGTACTAAGCTTGGTAACTGTAATAGCAAATTCTTTCAATCTGAGGGAAATAATTGATGTTCATGGTAATGATATAATTAAAGATATTTAATATACTTTCTGAAACAACACTAAACACTAATACTATATTGAAAATAATTTGTAGTATTCTTATCTGAAAATGTGTGTGGCATAGATACTCATTAGTCAGAACACTATACAATCCAGACCATGTCTGATAATTTGAGAATCATTATTCTCTAGACAACAGGTTCTTAGATTATAAAGTATTTATCTTAAATGTGCTAACAAATACTACATAAACACATGCAAAGTTTAGACCACGAAACCTGGATCTTTTTTATTTTTTTGTAATTCTTTTTTTCTTAAAAAAAATTTTTTTTATATTTTTTAAATTGGATAATAATTGCTTCAAATATTGTGATGGTTTCTGCCATACATCAACATGAATCAGCCACAGGTATACGTGTTTCCTCTCTCTTGAACCAAGATCTACCTTAATTGGAGCCTATGTGAAGGGTTTTATGGTACACTTCAGTATGAAATTAGCTTTTAAATTGATGTTATATGTCAAAACTATAAAGAAGAGTTTAAATTAAAAAAGCTTTGGCTCAGAAAGCTAGTGTTTTCATGATTATAACTGACCAAGATAGCCTTTTCAGTTTGAAAATTGTGCTTTGTGTAATGACGTCAAAAGCTCGTTTCCCTGCCTTTCTCAGCAGCAGGAAATTGTTAATAATTTCTTTAATCTCAGACTTCATGAGTCAGAAGCCTTTTAAAATTGATTTGGACTTTGATTTCATGACATACATATATCTAAATGAGTTGTACATTGACACAAGAACCATAGTTCTATAATTATCTTCAAATCAATAAGTAGATTAAGTGTGTTTTTCCTTAGGGATTATTATGAAACTGATGTTGTGTTTTGTAATTGATGACATTTTAGGATTGAGAAAATAATGTTTTTTTTTAAGCCAATAATAAAAATACACAAGTTTGTAAATGATTCACTCATTACTAAAGTAAAATGAAATATGTCACTTTCCCTCCGTGAAATTAAATACGCCTACTTGAGTGGAAGAGGGGATGGCCCTATAGCCAGTGTACCATGAACTGTGCCTTAATGTGTGTTACGTGTGAACCTCACTTGCTGTGCGTGCCAGAGTGGAAGAAAGGGTGAGAAATAATAGTCTATACTTGGTTGAGAAGGCAGAAGGATGGGGAAGGGGATGGCTTTTTTTCCATGGTGCTTTGACATCCATCAACCAAGGAATTCTGGTTTCTCCCTTTGTTCCTCCCTGCCATCTCCCCAGTAAAGGGAGTTTAAGATAGAAAACTGGACATGCAAACCTCTTTCTGCATTTGTTTTTTTGAAATGTGTCATGCCTGCAGACAGCCTATGTTGTGGTCTCTTGCTGGAAGTGTATGTTTTGCAGCGAAGACTGTCTGTCCCTGCAAGAGGAAACCTGTAGTTGTTCAGGACTGCCAATGCCTTGGTGAGCAGATGTGTCTAATTCTGGGTTTGATACTAGGTGGCCATTGTTGGCACAAACCTCAATCATATCCTTTAACCTAGACTTTTTCATCAATAAATCTGACTTAAATCTCTGCATCACATTTTGTTTCTGAAGTGGTTCAGAAGTCAGGAAGGGAAAATGGGTGTTACTTTGAGTCCCTCATAACAAAGATTACTGTAGATTATTTCAATGTAAGCATGAGACAAAAACCAAATTTCTTTCTAATTTTAGATTTTTTTTTTAAATCATGGAAATTCTATTGAAAATGGGCAGTGTTTAATTCCAAGGCAGTATGCAAACATTTGTTTGGCATATTTAAAACGTCTACTGACTTAGCGTTGTGCTAGACCACAATATTGATTCTAGATTTAATTTGAAGGAGAGGATATAAAACAGTATCTCTGCCCATCCTGTCAACTTTTTTGAGTGTAATTTTGCATATGATAAAATGCACTTATGGTAAGTTTAAGAGTTTTGACACGATGGTAAGTTGAAGAGTTTTGACAGTACCATCAAGATGGAGAGTATTTTTATCACCCAGAAAGTTCTCTAAAGTTGATTTATAATCAGTTCCCTTCCACCCCACAAACACTGTTCAACTAGTGATTTGCTTTCTG EMBV3_27992 GAACTCTTCAGATACTGCACCCTCCCTGAGGAAAGAAGACATCCCGTCATCCCTTGCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39086 AGGACTGGAGCAGGCGGGGAAGGAGAGTACCTGTGGACCGCAGAGCCATTAGAATAAACT Gene BVT0102_185916 + 0 NULL GK000025.2:677048-724445 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147567 1 XLOC_089454 NonCoding TCONS_00147567 XLOC_089454 NonCoding NonCoding - 25:681220-683039 - TSS110102 1819 2 TCONS_00147567_3 226 1 0 0.000381468789487789 2.76207335203853e-05 0.000381556492917465 6.39131919275402e-05 0.000436989868685374 2.16314527560056e-05 2.56479613283375e-05 9.10457163805745e-05 6.50643098091978e-05 0 1.13263610809812e-05 0.000271272379751294 1.73513583395034e-05 0.000318081944205453 8.09158817974091e-06 0.000101639070528078 0 0.000551750571040267 0.000918541355068155 4.74420386822102e-05 0.000108478869252074 0.000171340303195696 0 6.45148581299552e-05 2.66625997033557e-05 0.000205282096764967 0.000202928907920012 1.58414150676953e-05 0 0.000214840797155934 XR_239944.1 LOC101903096 PREDICTED: Bos taurus uncharacterized LOC101903096 (LOC101903096), 0.0 3281 100.00 0.999450247388675 0 noncoding 0 0 0 0 -2.16542999230085 0.0161719184455003 -0.027573860272499 0.594192953820133 CAGGTTGTAAGCATAAGCTGTGAGTCATAAAGTCTCAGGGCATTGACTCTGGTTAAGCAGTTTATTCTAATGGCTCTGCGGTCCACAGGTACTCTCCTTCCCCGCCTGCTCCAGTCCTCCCATGACACTGGCTCCTGCCAGCATGTGGGTCAGAAAGACGCACGTGGTCTATACCTTGGTGCTGCTGAGGTTCAGGAAGAGGCCCAGGGCCTGCACCTGCCTAAGCACCAAACACTCCAGTGCCCACAGGCCATGGGGGTCCCCTTCTGATGAGGCTAGTGTCACTCAGGGGTCCTGCGCATTGCTGGCAAGTCTACTGGTCTGCACCCGCAAAGGGCCTTTCGCCAAGAAGGTGGGTGAGTGGGACGAATGCACACGTCGGGCCACCAGTGCGTTGTCACCCAGGCCTGGGCATGGCTCTAGGTTTTCCCTCTCGACCTGCAGCTGCACCCCCAGGTCTGTGCAGCACTGCAGAAAATTCTACCTGATCATGGGGCAGCTATGTGAGTGGAGCTGGGGGTGTGTGGCGGGCCCCCCAATTCTGTCTCACAGCTGCCATAGCCACCTCCGTCCCCTGCCCAGTGGCCAAGTGTGGTGGGCCTTGCGCCTTCAGCAGGTACGCTTCTGGTCCCAAGCAATATGCCCACCATGTAGGGGTGGATGGAAGAGGCTCCTAGAAACAGTTTCAGTGCCCAGAGGTTTTCCACAAAAGCAGAGGAGACACTTTAGGGGACGTTGCTGTCAGCTGGGGCTGCCTTCCACAGTAGGGATGATGCCCAGCAGTGCTCACGGCCCAGAGTAGGTCTGATGAACTGGCTGAGCAGGAAACTGAGGCCCCGGGGCTCTGGGCTTGCCCAGGTCTCACCTCGGTTTTGTGTCCTTCATCTAGTGACTTCCCTCAAACACCTGGAATCCCTGCCATCTGCTCATTTCATCTGAAGCTGCAGAAGCTCTGGTGACTGCAGAGTGCAAGTAACTGAATGGGGACCCTCTACTATCACAAAGATCTCTCCCCAGAAAGGACCCCCGTCCTGTGCCAGGGGGCGAGGTCTCCCATGGGGACCGCGGACATCGTTCACCCCTCCCAGGTTCAGCGCAGGGCTCCCTCGCCTGGGCCACGTCTGCCACTTCTGGATGCAGTCTATGCAGACTGCTCTGCAGAACTTGACACCAGAGTTACAAGGAATCTAGAATGCAACCTCCCGGGGAAAGGTCTGTCATGTGAAACGGTGAAGGACCAAGCCAACAGGAGTCCACGCAAGGAGCAAACGCGGGAGCGCGTCCTGGACTGCGGAGCTCTCAGGGCGGAACCGGCGGGACGGCTCCGAGGTGTGCGCGGCTCGCTGCTCGGTTTCACAGGACGAATCTGCTCCGGGCTTGACTTCCGGAGGACCCGGGCGGCGCGGAGCTGCAAGAGGAGCCCACGCACCGCGGGGCCCTGGCTGCTCGGCCGCTGGCAACGCAGGGCAGACTCGGGGGGCTTCCCCTCACGGCCAGGATTAGGACAGGGAACTCGCGACAGACGCCGTTATCAGAAGACGAGGACTCCTAGGACGGAGGCTGACGGCCAGTTTAGCTAAAGAACTTAAGCGAAACAAGTTTCCGGCGTTCTTACTAGTGTTAACGTGCGATGTTTATCGTGAAGACAATACCGAGCGGCACCGCGAGGGAAGGCCCGGCAGCAGGCTCCAGGCACCTCCGCTGCTCCGCGATCCCCACCGTCAACGCTCTTCCACAGCCCGCGGCGCTTGAAGCCCACTGCCGCCTTGGGAGATCCCTTCCGGGTCTAAGCGTGGAGGGGGCGGGGCACGCAGGGGGC TCONS_00145815 . 5' 4174 TCONS_00145815 . 5' 4174 EMBV3_29502 GGATACCACAGCCCCAATTCACAGGTCACAGCAGCTTCAGAAGAATTACAAGACTGGTCC Gene BVT0101_046354 + 0 NULL GK000010.2:21783182-21786855 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016340 TCONS_00016341 TCONS_00013129 2 XLOC_008709 XLOC_007998 Coding TCONS_00013129 XLOC_007998 NonCoding NonCoding REM2 10:21778870-21786845 x TSS9785 3190 2 TCONS_00013129_2 135 0.158620689655172 2 0.600200652119388 9.90620257832289e-06 1.29881537314502e-299 0 5.51623693933363e-05 1.64057529087516e-05 1.12756728554031e-129 0 6.24793496727548e-05 9.15765324901564e-05 0.000103181082216341 4.80783652011265e-05 2.48208058548344e-06 6.65383039831205e-06 0 7.65289281876091e-05 0.00072784248316527 1.72142245586547e-100 0.000494597581597079 0 9.84262408670544e-255 2.08301696351379e-05 9.69447683058355e-70 4.38810069672625e-05 8.02075151833446e-05 3.6279679834369e-05 0.000125646722323855 5.49128823548196e-23 1.78115029705633e-17 4.2606799526084e-05 0.000109308511868501 XM_005211312.1 RBM23 PREDICTED: Bos taurus RNA binding motif protein 23 (RBM23), 0.0 4747 100.00 0.824764890282132 XM_005267510.1 LRP10 PREDICTED: Homo sapiens low density lipoprotein receptor-related protein 10 (LRP10), transcript variant X1, mRNA. 3e-114 417 70.08 0.274921630094044 0 noncoding 0 0 0 0 -0.0429454224512 0.6815583830577 0.0330204788589547 0.545410672119759 AGCAAGTGCAGTAGAAAAATTCTTTATTGAAAAGAGAAAGGTGGTCCCCTTGGTGGTGCCTCCTGGGTCCTGGCCAAAGGCAGGTTGCCACCCCTCAAATCTTCAGGCAAAAGTCTCTGCGCGCCTTACCTTTAATAACCTTAAAGGGGAAGTGCCGTGGTGCCACGGTAAGTCCCAGAATCTGAAGAACACCGGTTCCAGGCCCTTGCCTTTAAGAACTTATTAAGGGCAAAGTGGGCAAGTGCAGCAGATCAGAGACGGGACGCTGTAGGAAAGTCTCAAAGAAGAGGCTCTGTGACTTTAAGTATCTCTTACGATGAGGCATGTTCGCGCTGAGTACAATGGTGGGAAACTGTAAAGAAGTCTAGTAAGCTCTCTTCCAGTTTTTGCTTTTAGCATCTCTTTACAGGAGAGGTGGTCAAGCGCGAATTAATAAAAAAGAAAATCCCTTACAAAACTACTTCCCCCCCCGCCCGCCGGAAGCCGCCCCGCCCACTGGCCGCGGCTCGCCCTCCGCGGGTCCGCGTCCTCTCTTTCCAGGAGCCTCGAAGCCGGGAGATGCTGTGCTAAGCACCTTCCTGAATTACCTCCTTTCATCCTCATGATCCTGAGGCTCAGAGTGATAGGTGAGTGGCCTGTCCTCCAAATCAATCATGCAGCTGGAAAATGGGGACACCATGATTCCCACCCAGATCCTTCCAGTGCCAGAGACTATCTTTCATCTCTGTCTTTGTCTTAAATATTCCAGCTGTTTCCTATTATTGGGAACAATCTTTATTGCCATCTTCAGTGGATTTTTCCGACTGAAGCAAATAGTCATATGGGGATTACTAGTGCAGTATGTGGATGGAGGTCAATTACAGGGCAACAGAGTAGGGTCTAGCGGAAGCAGAACTATTAAGCAGCTACAATCCTCGTGTACTTCACTGGATAGACTTACAGTCCTCAATCACAGCCTACTTGTCCTTAACTTTATTCACAATTTTAATGTTCCACCTGTGTTCCTGTACTTGAAGATTAGAAGTACATCTATAGCAGCTAGTGACCCCTACAGTAGCTAATAGTAAGAGAAACAACATCACAGAAAACTTTTAAAGCAGTCCTTTTAAAAAGTGGCCTAAGGTCATCATCTAGCATTAAGGCGAATAGCTTTTCTGACACTGTTCACAGCTTCTGAAGACATTGCTGCAGAGTTCTTTGGTTTCTGAGTGATCCTCAGCTATCCAGAAGGATTTATGTTATATTGCAGATGTGCTGAAGATGAGTGTAATGTTTTAGAATGACTTCCTTCCAAAATGAGTTTTTTAAAAGTTTTAAATTACAAAGGGGTGAGCTTTATATATCTGGAAAGCTCATTTAGATGGTAGAATTCATTTCTATGATACTAGATAAGAGTGCCAGTGTCTGCAGAGCCCAGCGAGGACTCTTGACCATGACTTCTGCTGGCTCTCAATCTAGCCTCAGGCCACAGATGCAGGCTGGGTTTCATCTTGAACCATCATCTCTCTCATCCCACTGGTAAGTGGCTGTGCACTTGCCCGGCTTGAGGCTCCCTCAGGAATTGGAGGTTCTGTATAATAATGGGACAGACTGAGATTTGAAACTGAGCGGATCCAGGTTTAACTCTGCCTCTCTAGAGACTGGACCAGTCTTGTAATTCTTCTGAAGCTGCTGTGACCTGTGAATTGGGGCTGTGGTATCCATGGCACAGCTTCATTGTGAGGGTTAGCTACACCCGATAAAGGGTCTGATATGCAGCAGGTTCCCCTGCCATTTGGTGCTCCACAGCCTCAGGCTGTGTGGCTGGGTATCCCTCTCCCTTCCCAGCGCGGCCTGGAGCTTGCTTTAGGCCCAGATTCTGCTCCTTAAGAACCAAATTCTGGTATCTGCTCAGATTGTCTGATTCTCAGGCTGATTCCCATCTCATAACTATCACCTCCCTCCTTCCCACCAAGGGCCTTTGCTTGAGTCCCATGCCCTGGTACAGGGTATCTTATCTTGACAGGATTTGGAGTCACCTCATTTCTTTTTCCTTGGGCCATGGTGAAAATAAACTTGGGTGACAGCCCCCCAGTGTCTCACCCTTACCTGGATATGAGCCTGTCTTCATATCCCATTATGCCAGTACAAGGTCAACCCTGTCTCCCTGCCACTGGGGCTTCCCTGGGCTCCTGCTTGCTGGAAGGAAATGCTGAACAATTAGTGCTGGGTGTGAGGACACTGACAGGGTGTAGGCAACAGGGCGCCTCCAGCAGAGGGGTGGGGATAGGCCAGGCCAGGCAGGAAGGGGAAAATGAACCTAAGGGGGAGCCCATTTCTCTGGGGACTGATTCTGTTAGGGAATGCCTCAGCTCTGCTTCTGTAGGCATCACACCAACTTCCATAGGCTCTTTCTACATCCTTTGTCCCCATTAATTTTCCTTTTAAACTCTGGGACAGCTCTGTCACCTTGCTTACCACAGACTGGTTCTTACCACAGACCAGTTCTCACTGGTCATTCCCTCCATTACCCTCTCCAGCTCTTTGGGGCCCTCCTACAGCCCTAGCCCTCACTGTCTGCTTAGTTTGCTTATCCTGTGGCCTCTCACCTTGCCTAAAATCCACAACTCTATTCCAACTACTGACAGCATTCTTTAGCATCTAGTTTGGACCCTCTTCCAGAAAGACCTCTTGGATTTGGCCAAGGTGATGCTAGCATCTTCATACCCTGAATGATGATGATTTTTCTCTGGACGCATCTTTGTCTGCTTTGGGGCATGCTGGACAAGAGTTCATCTGTCTTGCTTAGGACAGACTGAAATGCTTGGTGGGGTGGAGGATGGGGGGCAGAGTGCTTCACCAGGGACAGTCTGCTTCTGTGATAAGTGATCTGAGAGTTCTCCATAAATGGGAAGTTTCCTAGCTGCAGGGCCCTGCTGGCTCACGAATTCTGAGAGCCTGGCAGTAAGGAGGCTTGGTGCTCACTGCTGGTGTCAGGCACTATACAGATGGGCCCCTGGCAGTAAGTGGAGATAGAGAGGCTTACTCTTGGGGTTCCTAGAATTTTCTTACCCTCTGAGTGGTATAAAAACTAAGGATGGGTGATCTGAAGATAAACAGGAAAAGGGCAGAGAAAAGGCCTTTATAGCAAGGAGCAAGGTGAGGGGAGCATAAGCTGAGCTAGGTAGAGAGGCGGGGCCCAGCACAGCTC TCONS_00016338 TCONS_00016341 r 5' 0 TCONS_00016338 TCONS_00016341 r 5' 0 EMBV3_09902 TATGCCCCAGACTATGTATGGGGTTCAGCCAGCTCAGCAGCTGCAGTGGAACCTAACTCA Gene GeneID:514465|SMAP2:NM_001075670:167_cdna UTR3_Alt 2 NULL GeneID:514465 3 GENE SMAP2 MGC143386 SMAP1L small ArfGAP2 EMBV3_04549 CTCACTTGAAGCACAGCTGGCCATGGGGCTTGGTAGAAAAGTTCCTATTTTCACCCTGAC Gene GeneID:515605|APPL2:NM_001046206:1019_cdna Constitutive 0 NULL GeneID:515605 5 GENE APPL2 MGC138091 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 EMBV3_24404 CATGGTTCATCGTTTTGGCAGACACCTCTCACCCTGGGTTCATGTTCTCATGGGCAATGT Gene GeneID:516414|LOC516414:XM_002693349:268_cdna Constitutive 0 NULL GeneID:516414 15 GENE LOC516414 NULL similar to rCG39410 EMBV3_16900 CCTGACAGTGAGGACAAATATGCTCATAATATTCAGTTCTGGCACGTCCTTGCTGCCAAG Gene GeneID:100140158|ANO5:XM_002699077:4_cdna Constitutive 0 NULL GeneID:100140158 29 GENE ANO5 NULL anoctamin 5 EMBV3_28569 GAAACTCCTGCAGCTTGATACCTCCTGCTTTTGTAGCAGTGAACAGTGAATGTTTGAGAG Gene GeneID:614177|MAT2B:NM_001046526:17_cdna Constitutive 1 NULL GeneID:614177 7 GENE MAT2B MGC137399 methionine adenosyltransferase II, beta EMBV3_22716 CCATTTGGTTTTGAGTACTTAACTTGTTTTCATTTCCTCAAAGTTAAACGTGTCTTCCAG Gene BVV0101_001565 + 0 NULL GK000006.2:79361437-80161685 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29747 CGTTGTTGGAGGGGCTGGAGTTGTTCTCGGTCCTGTGTTGTCCGCTTAGAGTCATTGATT Gene BVV0102_078660 - 1 EMBV3_20472 GK000010.2:26445635-26493104 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121822 1 XLOC_073490 NonCoding TCONS_00121822 XLOC_073490 NonCoding NonCoding LOC100847284 21:61983539-61985682 = TSS90653 887 2 TCONS_00121822_2 46 0.0473506200676437 2 0.586834733893557 0.000368659782515473 0.00142640989217922 0.000834633957059002 2.29520017266819e-05 0.000172550525941375 0.000350849592216037 0.000433924516804673 0.00167760285147774 0.00152915712262596 0.000767051849387862 0.000532982998131706 0.000372785659910502 0.000389389129545337 0.00128644213637053 0.000352188904915686 0.00727999340360531 0.00448562577508667 0.00292074675416067 0.000153478881008211 7.18423418098347e-05 0.000277219080481347 0.00261086389505191 0.00556325205147087 0.00409703100169538 0.000585681985938751 0.00027688772328273 0.000425565396531273 0.000993855811407545 0.000993620423858321 0.00241624759600601 XR_139009.2 LOC100847284 PREDICTED: Bos taurus uncharacterized LOC100847284 (LOC100847284), 0.0 1600 100.00 0.998872604284104 NR_003138.3 SNHG10 Homo sapiens small nucleolar RNA host gene 10 (non-protein coding) (SNHG10), transcript variant 1, non-coding RNA. 1e-23 114 81.67 0.134160090191657 0 noncoding 0 0 0 0 0.0420707994259982 0.780992490987556 0.0230596110559395 0.706640599264449 AGACGGCGGCCTCGGCGTTGCCGCGGCAGTGCGGTTGGCCGGTACCTGGGTGGTGAGCTCGCGTTGTTGGAGGGGCTGGAGTTGTTCTCGGTCCTGTGTTGTCCGCTTAGAGTCATTGATTCCAGGTAAATCAGAGGAACAGACATCATGAACAGAAATAATACAGGAAGTGATGTGATGCCGAAGTTTAACTGTTGTTCCAGAAGTCCAGCATCTGTGGCTCATAACTTTAGGAACTGTATCATTTGCAAGGTCACCTAACTTTTACTCATATTGGGTTGGCCAGAAAGTTCACTCAGTTTTCCTGTAAGCTGAGAGAACCCGCACGGACTTTTTGGCCAACCCAATACAGTAAGTTTTGTTTGTTTGTTTTTGTTTTTTTTTAAATAAATATTGACAGTTTGTTCCAGAAAACCTAAATTGTAAATTGCCTACTCTAAGCTGCCTGATTCTCTGCTTGTGTTCACTGGAATAGGGAGAAGAATTTGCAAACTGATTATGTGAGGGTCCGAAATGTAAAACCGAGCCGTGGGGAGTAGCCTGTTTTTTGCCTGGTGTGTAATATCGGCTTTGCCTGTTACAACTGACAGACATTTTATTAAGTTGAGAATATAGCTGTCATTAAAGACTAAGAATAATCCTTGAGCAGGAAGAATATGAACCCTATGTTTTCCAAAATTACGATAGAGTTGCTGGTTACAGTCAAGTATGGTGAGACCGTCCGTGAAAGGCAAGGACATGGAAAAGCAAGTGGGAGTTCTTTCCAAGAGCTAGGTGGGGTGGCTTTGATAGGATGATGAAGGGAGAGAGATCACCTATCCAGACCAAAGAAATTGAAGCAATACACCTAAATGTAAGTTTTTAATAAAGTAACCTAAAGTATAAAA EMBV3_08088 CGACTAAAAGAAACCACCCTCCTGTTATGCTCGACATCTCCAGTGTGTTTATGTAAACTG Gene GeneID:509977|ARL6IP5:NM_001014891:23_cdna Constitutive 0 NULL GeneID:509977 22 GENE ARL6IP5 NULL ADP-ribosylation-like factor 6 interacting protein 5 EMBV3_06978 GGGTTCGCGTGCCTGGCGGCCAAATATTGACCCATTTACTCTAGGAATCTGTTTCCACAT Gene BVV0102_155002 - 1 EMBV3_13986 GK000024.2:39205395-39250141 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29033 GAAATCAGCCTATTTAATAATTTACTGTTCTAAAAGTCCAGTGTGGATTTGTTTGGTATG Gene GeneID:538461|KBTBD6:XM_002691770:353_cdna Constitutive 0 NULL GeneID:538461 12 GENE KBTBD6 KBTBD7 kelch repeat and BTB (POZ) domain containing 6 EMBV3_31768 CCCCATTACAGAGCACTTATTCTGGACTGATGGTGGAGCCTTCTAAATTTCCAGTCAGGC Gene GeneID:782063|LOC782063:XM_002683908:2_cdna Constitutive 0 NULL GeneID:782063 Un GENE LOC782063 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_00976 TCACCTGGACAGCGACCTCTCCCTGTTGCTGCTTGCCACACCAGTACAATTCAATAACTT Gene GeneID:783279|LOC783279:XM_002689470:9_cdna Constitutive 0 NULL GeneID:783279 8 GENE LOC783279 NULL similar to hCG1643218 EMBV3_43061 TTACCATTCTGGGGACAAGCACCTGATGAGAACTGCTTTGAGGATGCAGTCTACTGGGAG Gene GeneID:281456|RHCG:NM_174172:65_cdna Constitutive 0 NULL GeneID:281456 21 GENE RHCG MGC134580 Rh family, C glycoprotein EMBV3_07413 GCAGCGCCGGGGAGATTACTTTTCTGGAAGCTTTGGCTAGATCAGAATCTAAAAGAGATG Variant GeneID:533853|SENP6:XM_002690035:31_cdna 53^199 4 EMBV3_22415 GeneID:533853 9 GENE SENP6 NULL SUMO1/sentrin specific peptidase 6 EMBV3_10883 CTTCAGGCATCGCTGGAGCATTTCAAAGAGAACACGAGCGGCTCCGCAAGTACCACTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42225 GTGAAAGGATTCACCCCTCCCCACAGATGAGGGTGCTGCACAGTTCAGTCTCAGAGACAA Gene GeneID:100298830|LOC100298830:XM_002684000:2_cdna Constitutive 1 NULL GeneID:100298830 Un GENE LOC100298830 NULL similar to pseudoautosomal GTP-binding protein-like protein EMBV3_19629 TTTGTCCAAAAACCGCACCACAGACAGCCATAAGCAACCAGTGGCAACAGTCTCTCGTCA Gene GeneID:515909|POLI:NM_001024692:107_cdna Constitutive 0 NULL GeneID:515909 24 GENE POLI NULL polymerase (DNA directed) iota EMBV3_32171 TTGCAAGAAGAGGATGTAGAGACATACAGAGAAAGCCACTTGACAGCGGGGGCAGAGGTG Gene GeneID:538963|F2RL3:NM_001076138:107_cdna Constitutive 0 NULL GeneID:538963 7 GENE F2RL3 MGC140530 coagulation factor II (thrombin) receptor-like 3 EMBV3_23134 CTTTGGTGTCAGTTGTTTGGAAGTCAATGATGTTTGCCACTGAAATTCACATCCATAGAC Gene GeneID:540733|RCHY1:NM_001083754:101_cdna Constitutive 0 NULL GeneID:540733 6 GENE RCHY1 MGC139530 ring finger and CHY zinc finger domain containing 1 EMBV3_14805 ATGTAAATTCTATCGCTAAAGATGTCCTTCTCTAGGTGTTCCTGCTGATCAGACGTACAC Gene GeneID:539536|KCTD4:NM_001099387:172_cdna Constitutive 0 NULL GeneID:539536 12 GENE KCTD4 NULL potassium channel tetramerisation domain containing 4 EMBV3_35736 TGAGACAGAGAACCGCTACTGCATGCAGCTGTCCCAGATCCAGGGGCTGATTGGCAGTGT Gene GeneID:281889|KRT17:NM_001105322:30_cdna Constitutive 1 NULL GeneID:281889 19 GENE KRT17 MGC159887 keratin 17 EMBV3_42531 ATCCTTGTCTTCCTCATCAACTGCATTGTCTTCGTGCTGCGCTACCGGCACAAGCGCATT Gene GeneID:506723|TMEM132E:XM_002695655:113_cdna Constitutive 0 NULL GeneID:506723 19 GENE TMEM132E NULL transmembrane protein 132E EMBV3_39845 TAGGTTACCATTTGAGAGCTTCACGTTTTACAGAGTGCAGAACAACGAGGGCAGGAGAGG Gene BVT0102_201266 + 1 EMBV3_35960 GK000021.2:28974131-29284082 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123473 1 XLOC_075025 NonCoding TCONS_00123473 XLOC_075025 NonCoding NonCoding TJP1 21:29047603-29048797 i TSS92232 1194 2 TCONS_00123473_2 40 0.126465661641541 1 0 0.0007406797584497 0.00102672535672929 0.00010075544566137 0.00069548930965379 0.000157129767927625 8.98760473410911e-06 0.000141641664543004 0 0 6.89195235990415e-06 3.8344666290185e-06 0 0 0 0 0.00291987159264426 0.000319810364480865 0.00100867870316795 0.000444429349836329 0.000301148772513322 2.542484177628e-05 0.000223738835464597 0.000514792375449465 0.000982851458097156 0.000533853218739547 0.000247831311717242 0.000942174953562171 7.24008121225475e-05 0.000182962457265523 0 XM_005196209.1 LOC101908662 PREDICTED: Bos taurus uncharacterized LOC101908662 (LOC101908662), 6e-100 369 100.00 0.17001675041876 0 noncoding 0 0 0 0 -0.203434541613694 0.230333226932112 0.0150653965337755 0.821733522996083 GGCGGAAAGCGCCCCGGAGGAGCGAGCCCCCCCGTACCCAGCCCTTGCGACTTGGAGAGAGACGCCCCTGGCCACGACCCCCGCTGCCCGCCTGCCTGAGCCTCGCTGGGAAGTGCTTCCAGGCTGTCGTAGTGGACGGACCGACTGCCCCGCGAACGCTGGTCACGGGATCATGGGCACCCGAGGGCCCACCCACATGAGGCCTTTATAGAGATCCAGCATCACCTTCAACAGCCCATGTAGACAGGGATCCCAAACGCATATTTTGGGCATCAAAAATCCTAGGATTCTCAGTGGCAAGGGAAGGGGTCGCGCCGGGCAGAGCCGCGAGGACGTTGGGTCCACAGTCCAGGGGACCAGCCCGCAATGCAGACGGCCTCGCTAGACACCAAGGAGTATTTCAGAAACCTCTCCTGCCCTCGTTGTTCTGCACTCTGTAAAACGTGAAGCTCTCAAATGGTAACCTAAAGAACCTAGTACAGTGCCGCAAAAGGTACACAAGAAATGGAAAAAAGCAGAAACGATGGTTTCCTCTTTAGAATTCAACTGTAGGGAAAATCTAACTTAACGAAGAAATACCTGCCTATCATACATAAAAATGAATTAAAATTTCAAACTAAAATACCATACATTTTGCAACCTGAAGCTACAGAACTAAAGTGAAAGTTGTTCAGCCGTGTCTGACTCTTTGCGATCCCATGGACTATACATTCCATGGAATTCTCCAGGCCAGAATACTGGAGTGGGTGACCGTTCCCTTCTCCGGAGGATCTTCCCAACCCAGGGATCGAACCCAGATCTCCCGCTTTTAGGGAATTTAAAGCATTCTGCAAATCAAATCCTTTCTCTTTTCTCTTCCTCTCCCTGCCCTCCCCCCACAGAAATGATTACAGTCATTTTTGTTTTAAAGTCATGTTGGATGTGACTTTTGTTTTATTCACTTCAGAACTGTAATGAAAAATTTCTTATGAACATTTTTTCACTGTGGCGTTTCATTTTTTATTTTCAAAGGTGACTGTGGAAAAACCTTCCACATTATTAATCTACCCATTTAATAAGATGTGCAGTCAGCATGACCTGCCCAGAACCAGATACCATTCCTTTAACAGACCTAAACCTGGAAATGTTTAGAACAAACGCAGAGACCTTTCCTCTTTCCTCGTTTGTCACTTTTCACCAGGCCTACTGTACCTA TCONS_00120912 TCONS_00120913 TCONS_00120914 TCONS_00120915 TCONS_00120916 TCONS_00120920 TCONS_00120921 TCONS_00120926 TCONS_00120907 TCONS_00120908 TCONS_00120909 TCONS_00120910 TCONS_00120911 TCONS_00120917 TCONS_00120918 TCONS_00120919 TCONS_00120922 TCONS_00120923 TCONS_00120924 TCONS_00120925 TCONS_00120930 . 5' 12 TCONS_00120912 TCONS_00120913 TCONS_00120914 TCONS_00120915 TCONS_00120916 TCONS_00120920 TCONS_00120921 TCONS_00120926 TCONS_00120907 TCONS_00120908 TCONS_00120909 TCONS_00120910 TCONS_00120911 TCONS_00120917 TCONS_00120918 TCONS_00120919 TCONS_00120922 TCONS_00120923 TCONS_00120924 TCONS_00120925 TCONS_00120930 . 5' 12 EMBV3_14825 AGGGTCCACGACCGTTAGCCACCTGCCAGACTGAAGGCCAGAGGCAACTTGTAAAAATTA Gene BVT0102_085256 + 0 NULL GK000030.2:88621167-89162375 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26561 CTCAAGTATAGTGCCAGGTCTTCTCTAGCTTTTCTCAGAATTCTTGGGCTACAAGTACTG Gene GeneID:540222|LOC540222:XR_082719:552_cdna Constitutive 0 NULL GeneID:540222 21 GENE LOC540222 MGC152170 hypothetical protein LOC540222 EMBV3_05535 CTGCCTGCCCAGTGCCTTTCATGTTGTTGAAGAAATCAGTAACAGTTTCCCCTCCATTCC Gene GeneID:516077|BNIP2:XM_002690851:196_cdna UTR3_Alt 2 NULL GeneID:516077 10 GENE BNIP2 NULL BCL2/adenovirus E1B 19kDa interacting protein 2 EMBV3_38847 GCTATCCATTTTTGGAAATCAAACGGGCTGAATGAGATTGCCGACCGTGGCAGCGTGGAT Gene GeneID:100336646|LOC100336646:XM_002683890:3_cdna Constitutive 0 NULL GeneID:100336646 Un GENE LOC100336646 NULL hypothetical protein LOC100336646 EMBV3_12806 CTTGTGATCCCCTTTCTACTCATCATCACATCCTACGCTCAAATCGTGTCCTCCACCCTC Gene GeneID:618112|LOC618112:XM_002695698:282_cdna Constitutive 0 NULL GeneID:618112 19 GENE LOC618112 NULL similar to olfactory receptor Olr1466 EMBV3_42637 AGGCTGCTGAGACTTGTCCCACCGCGCGTGGCCTGAAGCACTTTCCCGAGGCGGGAATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42543 CTGGTGATAGTTTCTCCTCGTTTGATACTCGGCTGTTGATAATCAGGTGTACGTGGCCAC Variant GeneID:520620|NIT2:NM_001038133:75_cdna 480^633 3 EMBV3_12791 GeneID:520620 1 GENE NIT2 MGC134308 nitrilase family, member 2 EMBV3_33108 TGTACTAATCTTTCCGATAGCTTGATGAGGCCACACGATATCCTTAAAAAAAGAAGCCAC Gene BVT0102_405930 + 0 NULL GK000025.2:13758356-13770790 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32133 TCCCCACCTCTTTGCTACGGTGATTAATCCACTTCCCCCAACCGCCACACACACTTAGGA Gene GeneID:616983|GSX1:NM_001105448:79_cdna Constitutive 0 NULL GeneID:616983 12 GENE GSX1 MGC148669 GS homeobox 1 EMBV3_33361 GACTTTGTCAACAGCTATGCGTCGTGGTGGTCCTCGCATGTGCTGGACTGGCTTAAGTAT Gene GeneID:788123|WSCD1:XM_002695768:249_cdna Constitutive 0 NULL GeneID:788123 19 GENE WSCD1 NULL WSC domain containing 1 EMBV3_16020 ATAGGGATTCACAGAGGGGAGCATGAGCTGGACCCTTGGTTATTTAAGAGTCGTGTGGTC Gene BVT0101_052004 + 0 NULL GK000017.2:46022178-46027457 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39799 AGGTGTACGTCATGGTGCTGGAGAACGCCAACCACAGCTTCTACTCCTACATCCTCAAGT Gene GeneID:781026|LOC781026:XM_002685086:10_cdna Constitutive 0 NULL GeneID:781026 1 GENE LOC781026 NULL similar to kyphoscoliosis peptidase EMBV3_24993 ATGACGTATCCTTGACGCATCTGACCTTTGGGAAGGAGTTCACAGAAGCGGTGGAAGCCA Gene GeneID:530409|PHB:NM_001034572:120_cdna Constitutive 1 NULL GeneID:530409 19 GENE PHB MGC127238 prohibitin EMBV3_19036 GGTTCTCAGTTGTCGCACGTGGGCTTTCTCTAGTTACAGTGAGCGGGGACTACACTTAAG Gene BVT0102_195795 - 0 NULL GK000007.2:90554764-90608688 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26966 CCTACCAATATGGATGTACTCAAAGTAATAGGCTGCCCCGTGCTCTGTTTCTCCACAGTT Gene GeneID:781881|SNX31:XM_002692780:45_cdna UTR3_Alt 2 NULL GeneID:781881 14 GENE SNX31 NULL sorting nexin 31 EMBV3_35237 CAAAGAGGGCCTGCCATAACGTATCCTAAGGATATAAATATGATACTGTCGATGATGAAT Variant GeneID:535837|TRMT61B:XM_002691495:422_cdna 723^803 1 EMBV3_06398 GeneID:535837 11 GENE TRMT61B NULL tRNA methyltransferase 61 homolog B (S. cerevisiae) EMBV3_15370 TTTTTAATTCCTCTTGCATTATTGACCAGCAGAGAGGCGGGGCTTCTTCCAACCCCCAGC Gene GeneID:616906|EIF4E3:NM_001102306:68_cdna Constitutive 0 NULL GeneID:616906 22 GENE EIF4E3 MGC148740 eukaryotic translation initiation factor 4E family member 3 EMBV3_30263 TGTCAACCGTGGCCAATGCCCTCTTCCTTAATGATTGGTTGCTTAGCTGTGGCAGTGTCT Gene GeneID:617720|NUDT12:NM_001046608:14_cdna UTR3_Alt 2 NULL GeneID:617720 7 GENE NUDT12 MGC137455 nudix (nucleoside diphosphate linked moiety X)-type motif 12 EMBV3_38496 TAAAGGCAATCACTTTGAAATCCTCCCTCCTGAACTGGGTGACTGTCGGGCTTTGAAGCG Gene GeneID:527708|LRRC8C:NM_001099039:162_cdna Constitutive 0 NULL GeneID:527708 3 GENE LRRC8C MGC157140 leucine rich repeat containing 8 family, member C EMBV3_31816 AGGGCCCAATTTTTCCACCAGGAGACAAAGGCAGCTGAAGGCAGATGTGAGGAAAGCCAT Gene GeneID:538888|RNF148:NM_001080736:52_cdna Constitutive 1 NULL GeneID:538888 4 GENE RNF148 NULL ring finger protein 148 EMBV3_34143 GGAGTCTCTGCCGGGTTCTAGATTGCTTAAGAAGCAACATCCTAAGTCAGTGTGTAGGTC Gene GeneID:512203|C8H9orf23:NM_001046111:19_cdna Constitutive 3 NULL GeneID:512203 8 GENE C8H9orf23 C9orf23 MGC137146 alba-like protein C9orf23 homolog EMBV3_05525 CACTGCTGTCCGAGGTCTGTACATGTGTAAATAGAAGTTCCTGGATACCCTAGAGCCCTG Gene GeneID:540371|MARCH6:XM_002696434:58_cdna Constitutive 2 NULL GeneID:540371 20 GENE MARCH6 NULL membrane-associated ring finger (C3HC4) 6 EMBV3_01233 TCTGTCTCTCCGTCCATGTGTCTGGTTCCCGGAGCTGGAGCCATCTCTGCTGGAGGGGAA Gene GeneID:617545|LOC617545:XM_002694130:488_cdna Constitutive 0 NULL GeneID:617545 16 GENE LOC617545 NULL similar to hCG19301 EMBV3_20078 AATTGAGCCATTGCTTCTAGGGCAAATGCAGGGTTTGGTTCCAATGAGCTTCTGGTCACA Gene GeneID:515418|CD1A:NM_001102024:9_cdna Constitutive 2 NULL GeneID:515418 3 GENE CD1A MGC152638 CD1a molecule EMBV3_34388 TAGGTGCCAGGTATCTCCCCGCTCCTCTCAGCTTGTGCAGAGGTGTTGACGGTATTATCT Gene BVV0102_148705 + 0 NULL GK000023.2:28100116-28101728 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134643 TCONS_00134642 1 XLOC_081473 Coding TCONS_00134643 XLOC_081473 Coding Coding TUBB2B 23:28100211-28105333 = TSS100318 3206 1 TCONS_00134643_6 444 0.0143480973175296 4 0.374731497754345 0.000768344092431372 1.65782701226661e-06 0.000287991537384555 0.000236098009203729 0.000347336214671155 0.000203894244630885 0.000173715493866933 8.5785340271346e-06 0.000691513571862432 0.00105089588326756 0.00488624051055608 0.000767689987826613 0.000693508053392895 2.3952555375168e-09 0.000296151757223523 0.0554221018302842 0.0101997291592272 0.0526122369096293 0.000476178051767015 0.00157045087236432 0.000201169117617498 0.00993617220671885 0.012151269744306 0.0285897955367536 0.00090525461657767 0.0006447151647248 0.000155648450930737 0.00385597842922696 0.00224568383191221 0.00274076230089066 XM_005223680.1 TUBB PREDICTED: Bos taurus tubulin, beta class I (TUBB), transcript 0.0 4525 98.95 0.791640673736744 NM_178014.2 TUBB Homo sapiens tubulin, beta class I (TUBB), mRNA. 0.0 2444 81.67 0.778852152214598 TCONS_00134643_6 sp|Q2KJD0|TBB5_BOVIN TBB5_BOVIN Tubulin beta-5 chain; 0.0 934 100.00 0.997747747747748 3 coding 0 0 0 0 -1.04532737067894 0.0106555315199885 -0.020595433741338 0.785473743868738 CCTCTCCTTTCTCCCTCTCAGAACCTTCCTGCCGCCGCGTTCGGACCTCGCTGCTTCAGCCTCCGGGTCCCGTTCCATCTTTCCACCCTGCGACTAGCAGCAGAGAAAAACTAATTCCATAATATTTTTTTGCCCCGTATACACTTTGAGGCGAGCAAAAAGATTAGAATAAATTTTAACAATGAGGGAAATCGTGCACATCCAGGCCGGTCAGTGTGGCAATCAGATCGGTGCCAAGTTCTGGGAGGTGATCAGTGATGAACATGGCATCGACCCCACCGGCACCTATCATGGGGACAGCGACCTACAACTGGACCGCATCTCCGTGTACTACAATGAAGCCACAGGTGGCAAATATGTCCCTCGTGCTATCTTGGTGGATCTAGAACCCGGAACCATGGACTCTGTTCGCTCAGGTCCTTTTGGTCAGATCTTCAGACCAGACAACTTTGTTTTTGGTCAGTCCGGGGCAGGCAACAACTGGGCCAAGGGCCACTATACAGAGGGAGCCGAGCTGGTTGACTCGGTCCTGGATGTGGTTCGGAAGGAGGCCGAGAGCTGTGACTGCCTGCAGGGCTTCCAGCTGACCCACTCGCTGGGTGGGGGCACTGGCTCCGGAATGGGCACCTTGCTCATCAGCAAGATCCGTGAAGAGTATCCCGACCGCATCATGAACACCTTCAGCGTGGTGCCCTCACCCAAAGTTTCCGACACTGTGGTTGAGCCCTACAACGCCACCCTCTCTGTCCATCAGCTGGTGGAGAACACTGATGAAACCTACTGCATTGACAACGAGGCCCTTTACGACATATGTTTCCGCACCCTCAAGCTGACCACACCAACCTATGGAGACCTGAACCACCTCGTCTCGGCCACCATGAGTGGAGTCACCACTTGCCTCCGCTTTCCTGGCCAGCTCAATGCTGACCTCCGCAAGCTGGCCGTCAACATGGTGCCCTTCCCACGCCTCCACTTCTTCATGCCTGGCTTTGCCCCTCTTACCAGCCGTGGCAGCCAGCAGTATCGGGCCCTCACTGTCCCTGAGCTCACCCAGCAGGTCTTCGATGCCAAGAACATGATGGCTGCCTGTGACCCCCGCCATGGCCGGTACCTCACCGTGGCTGCTGTGTTCCGTGGGCGGATGTCCATGAAGGAGGTAGATGAGCAGATGCTCAACGTGCAGAATAAGAACAGCAGCTACTTCGTGGAATGGATCCCCAACAACGTCAAGACAGCTGTTTGCGACATCCCACCCCGTGGTCTGAAGATGGCAGTCACCTTCATTGGCAACAGCACAGCCATCCAGGAGCTGTTCAAGCGCATCTCGGAGCAGTTCACGGCCATGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGGTGAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAACGACCTCGTCTCCGAGTACCAGCAGTACCAGGATGCCACCGCAGAAGAGGAAGAGGATTTCGGTGAGGAGGCCGAAGAGGAGGCCTAAGGCCAAGTCCCTATCACCTTAGGCTTCTTAATCCCCTCAGCCTTCTTCCTCAACGACCCCTTTCCTCTCCCTCAGAATTTGCATTTTCTGCATCTATCTTGTTTTTCTTTTTTGGGGGGGATTCTAGAACAGTGCCTGGCACATAATAGGCGCTCAATAAATATTTGTTGTTTGTTGAATGTCTCTTCTCTCTTTCCACTTTTGGGGAGCCTAGATTTTCTGCATTCTGGGTAACCCTGTCAATTTTCTTTCTGGTGCTCACTCCTCCCATCTGTCCAGTTAACATTTCCCTCTCTGTTTTCGAGATAGCTCTCCAAGAGGCTGGGGTTCCTCAAATCTCATTTAGAACCGTGTGCTGAAAACCTGGATTGGTGACTGCCATCCTAGGCCGATGTGCTGGCCCAGGGGAAGGAAACTGAGCGAGTAGAAGTCCCTACCAGAAAGGGTTGGGTTTGGAGAGGGGCATCCAGGGTACTGAAGTCCTAGGTGCCAGGTATCTCCCCGCTCCTCTCAGCTTGTGCAGAGGTGTTGACAGTATTATCTTCATTTTCAGTCTCCTTCCAAGTTCTGTCCTAAGCTATTACCTTTGCAAGTTTCTGGCCCCCACCCTATCAAGTGGGAATCCCTTCCTCTTCCACTTTATCTCCTTCATAATAACGTTGAATTCCCTCCTTTCTCCTGTTTGAGAAAGGGGGTCAAGAGAAGCAAGAGATAGCCTTGGTCTCTTAAGTCTCCAGAAAGCCCCTCCCCACCCCATCTTATCAAAAAAAAATGATACGTATCAACCCCTTCTGTACTTATATGGAAAGGTATGTGCTGCCACCTAAACGTCATTCCCCAGACAGGGGACAGAACACCTTCCATCTTTTGGCAAACATCTCATCTCTCCTGCTACTGCTTCCCCACTTCTTGATTTTTGTCCTATTCTACACTTCAGATTTCTATTGTGTTGAACTTGCTGCTTTTTTTCATATTGAAAAGATGACATTGCCCCAAGAGCCAAAAATAAATGGGAACTGAAAAGAATCTCGCAGCACGTGTGCTCATTCAGGGAAAGATCACTGGTGAAGGAGGCATGGGGCTCCAGGTCAGTTGTACAATATACTCTGCTCTCTATAAACAGGTGAGAATATCCTTACACCTTAATCCCTGGTACCCTGTCTTAGTAACTGGGATAGATGCTCAGATGTGAGGAGATCTAGGGATAGAAAGGAGAAATGAGGTGAATGTCATATAAGTGGTTGCCAGATAAGCATCCCCTTGAACTTGGAGAAATAGAGATTCTCCCACCTGCCCAGATGTACTGAACCAAAAGTGGGTTGGACCCCAGCAGTCTGTTTTTAACAGTGCTCCAGAAGAATCTTGGGAGATGCACAGACACTGTTTACCACTTGGAACACACAGTACCTCCTGGGTTCCTTTCAGTTATGGATATATGGGTTTTCTCAGCCTAAGGCAAAAATCACCTGGGGAGGGGTGGTGTCATATCATAGTCCCATTCTAAACTGACACTAGTGTTCCACCTAATAACTCCTGCTACAAAGAGCACAGTGTTAAGTCTCAAATATCCCTTTATTATCAGTAATTCTAGGGACTAACATAATTACTGATACTGCTGCTACTTAAGGATGCTCTTCTGACTATAATGAATTTCAGGGTAGAGTGGGGGTATTCTACAACTCTTAACAGT EMBV3_31343 CCATCACTACTGCCCTTAACACTTGCCTCTATTCTGTCGTATGTAGTGTTCTTAATGTCC Gene BVT0102_019786 + 0 NULL GK000025.2:16550326-16556488 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146389 TCONS_00146390 TCONS_00146391 TCONS_00146388 TCONS_00146382 TCONS_00146383 TCONS_00146387 TCONS_00146384 TCONS_00146386 TCONS_00146392 TCONS_00146385 1 XLOC_089087 Coding TCONS_00146382 XLOC_089087 Coding Coding SMG1 25:16551018-16652351 j TSS109453 16945 1 TCONS_00146382_8 2859 62 0.833389255121778 5.63681884741651e-26 0.000192899713776251 8.78066045156602e-18 1.89935932832178e-21 0.000422514158637793 1.87499471164378e-07 0.000448425259081668 1.9103557316207e-27 0.000165342465826399 7.38475646669989e-20 2.7396201755158e-10 2.89548050332942e-72 4.93629947627831e-05 3.52383054696099e-25 1.57430620710229e-06 1.88588151005512e-25 0.000108973710966051 0.000470609546411918 0.000969941794080027 0.00155155217508615 0.000760640823300092 0.00108808003996324 1.07076406356048e-05 0.00354979803361336 0.00014402622781293 0.000547233361646101 0.000117442899842667 1.70066719032613e-08 7.19861580297408e-20 5.78423758835256e-06 NM_001205915.1 SMG1 Bos taurus smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) (SMG1), mRNA. 0.0 1.543e+04 100.00 0.504868692829743 NM_015092.4 SMG1 Homo sapiens SMG1 phosphatidylinositol 3-kinase-related kinase (SMG1), mRNA. 0.0 1.277e+04 93.08 0.504868692829743 TCONS_00146382_8 sp|Q96Q15|SMG1_HUMAN SMG1_HUMAN Serine/threonine-protein kinase SMG1; 0.0 5705 98.88 0.997201818817768 1 coding 0 0 0 0 -0.0618170991969204 0.593142354491181 -0.0572175437844558 0.310401707107657 ATGAGCCGCAGAGCCCCGGGGTCTCGGCTGAGCAGCGGCGGCGGCGGCACCAAGTACCCGCGGAGCTGGAATGACTGGCAACCCAGAACTGATAGTGCATCAGCCGACCCAGATAATTTAAAATACTCTTCATCCAGAGATAGGGGTGGGTCTTCCTCTTATGGACTGCAGCCTTCAAATTCAGCTGTGGTGTCTCGGCAAAGGCATGATGATACCAGAATCCATGCTGACATACAGAATGACGAAAAGGGTGGCTACAGTGTCAATGGAGGATCTGGGGAAAATACTTATGGTCGGAAGTCGTTGGGGCAAGAGCTGAGGGTTAACAATGTGACCAGCCCTGAGTTTACCAGTATTCAGCATGGCAGTCGTGCGTTAGCCATCAAAGACATGAGGAAATCACAGGAGCGATCGATGTCTTATTCTGATGAGTCTCGACTGTCGAATCTTCTTCGGAGGATCACCCGGGAAGATGACAGAGACCGAAGGCTGGCTACTGTTAAGCAGTTGAAAGAATTTATTCAGCAACCAGAAAATAAGCTGGTGCTAGTTAAGCAGTTGGATAATATCTTGGCTGCTGTACATGATGTGCTTAATGAAAGTAGCAAATTGCTTCAGGAGTTGAGACAGGAGGGAGCTTGTTGTCTTGGCCTTCTTTGTGCATCTCTGAGCTATGAGGCTGAGAAGATCTTCAAATGGATTTTTAGCAAATTTAGCTCATCTGCAAAAGATGAAGTTAAACTCCTCTACTTATGTGCCACCTACAAAGCACTAGAGACTGTAGGAGAAAAGAAAGCCTTTTCATCTGTAATGCAGCTTGTAATGACCAGCCTGCAGTCCATTCTTGAAAATGTGGATACACCAGAATTACTTTGCAAGTGTGTTAAGTGCATTCTTTTGGTAGCTCGATGTTACCCTCATATTTTCAGCACAAATTTTAGGGATACAGTTGATATATTAGTTGGATGGCATATAGATCATACTCAGAAGCCTTCACTTACACAACAGGTGTCTGGGTGGTTGCAGAGTTTGGAGCCATTCTGGGTAGCTGACCTTGCATTTTCTACCACTCTTCTTGGTCAGTTTTTAGAGGACATGGAGGCATATGCTGAGGACCTCAGCCATGTAGCCTCTGGGGAGTCAGTGGATGAAGATGTTCCTCCTCCATCAGTGTCCTTACCAAAGCTGGCAGCACTTCTCCGGGTATTCAGTACTGTGGTGAGAAGCATTGGGGAACGTTTCAGCCCAATTCGAGGTCCTCCAATTACTGAGGCATATGTAACAGATGTTCTGTACAGAGTAATGAGATGTGTGACGGCTGCAAACCAAGTGTTTTTTTCTGAGGCTGTGTTGACAGCTGCTAATGAGTGTGTTGGTGTTTTGCTCGGCAGCTTGGATCCTAGCATGACTATACATTGTGACATGGTTATTACATATGGATTAGATCAACTGGAGAATTGCCAGACTTGTGGTACAGATTATATCATCTCAGTCTTGAATTTACTCACATTGATTGTTGAACAGATAAATACAAAACTGCCATCATCATTTGTAGAAAAACTGTTTATACCATCATCTAAGCTACTATTTTTGCGTTATCATAAAGAAAAAGAGGTTGTTGCTGTAGCCCATGCTGTTTATCAAGCAGTGCTCAGTCTGAAGAATATTCCTGTTTTAGAGACTGCCTATAAATTAATTTTGGGAGAAATGACTTGTGCCCTAAACAATCTGCTACATAGTCTACAACTTCCTGATGCCTGTTCTGAAATAAAACATGAGGCTTTTAAGAATCATGTTTTCAATGTAGACAATGCAAAATTTGTAGTTATATTTGACCTTAGTGCTCTGACTACAATTGGAAATGCTAAAAACTCACTAATTGGGATGTGGGCCCTGTCTCCAACTGTGTTTGCACTTCTGAGTAAGAATCTGATGATTGTGCATGGCGACCTGGCTGTTCATTTCCCTGCCATTCAGTATGCAGTGCTCTACACATTGTATTCTCATTGTACCAGGCATGACCACTTTATATCTAGTAGTCTTAGTTCATCATCCCCGTCCTTGTTTGATGGTGCCGTTATTAGTACTGTAACTACAGCTACAAAAAAACATTTCTCAATTATCTTAAATCTCCTGGGAATATTGCTTAAGAAAGATAATCTTAACCAGGACACAAGGAAACTGTTAATGACCTGGGCTTTGGAAGTGGCTGTTTTAATGAAGAAGTCTGAAACATATGCACCTTTATTCTCTCTTCCATCTTTCCATAAATTTTGCAAAGGCCTTTTAGCCAACACTCTGGTCGAAGATGTGAATATCTGTCTGCAAGCATGCAGCAGTCTACATGCACTGTCCTCTTCCTTACCAGATGATCTTTTACAGAGGTGTGTTGATGTTTGCCGTGTTCAGCTAGTCCATAGTGGAACTCGTATTCGACAAGCATTTGGAAAGCTATTGAAGTCAATCCCTTTAGATGTTGTCTTGAGCAATAACAATCACACAGAAATTCAAGAAATTTCTTTAGCATTAAGAAGTCACATGAGTAAAGCACCAAGTAACACATTCCACCCACAAGATTTCTCTGATGTTATTAGTTTTATTTTGTATGGAAACTCTCATAGAATAGGGAAGGACAATTGGTTAGAAAGATTGTTCTATAGCTGCCAGAGACTGGATAAACGTGACCAATCAACGATTCCCCGCAATCTGCTAAAGACAGATGCTGTCCTCTGGCAGTGGGCTATTTGGGAAGCAGCACAGTTCACTGTCCTTTCTAAGCTGAGGACCCCACTTGGCAGAGCTCAGGATACCTTCCAAACAATTGAAGGTATCATTAGAAGTCTTGCAGCTCACACATTAAACCCCGATCAAGATGTTAGTCAGTGGACAACTGCAGACAATGACGAAGGCCACAGTAGCAACCAGCTTAGACTTGTGCTGCTTCTGCAGTATCTGGAAAACCTGGAGAAGTTAATGTATAATGCATATGAAGGATGTGCCAATGCATTAACATCGCCTCCCAAGGTCATTAGGACTTTTTTCTATACCAATCGCCAAACTTGTCAAGACTGGCTGACTCGGATCCGACTCTCCATCATGAGGGTTGGATTGTTGGCAGGCCAGCCTGCTGTGACAGTGAGACACGGCTTCGATTTGCTTACAGAAATGAAGACAAATCCGTCTCAGGGAAATGAATTGGAAGTAACTATCATGATGGTGGTAGAAGCATTGTGTGAACTTCATTGTCCTGAAGCTATACAGGGAATTGCTGTCTGGTCGTCTTCGGTTGTTGGAAAAAATCTTCTCTGGATTAATTCAGTGGCCCAACAGGCTGAAGGGAGGTTTGAAAAGGCCTCTGTGGAGTACCAGGAGCACCTGTGTGCCATGACAGGTGTCGATTGCTGCATCTCTAGCTTCGACAAATCCGTTCTCACATTGGCTAATACTGGGCGTAATAGTGCCAGCCCCAAGCATTCTTTGAATGGTGAATCCAGAAAAACTGTGCTTTCCAAACCAACTGATTCTTCTCCTGAGGTTATAAATTATTTGGGAAATAAAGCATGTGAGTGCTACATTTCAATAGCTGATTGGGCTGCTGTACAGGAGTGGCAGAATGCTGTCCATGACTTGAAAAAGAGTACCAGTAGTACTTCTCTCAACCTAAAGGCTGATTTCAACTACATAAAATCACTAAGCAGTTTTGAATCTGGAGAATTTATTGAATGCACTGAACAATTAGAATTGTTACCAGGAGAAAATATCAGTCTACTTGCTGGAGGATCAAAAGAAAAAATAGATATGAAAAAACTGCTTCCTAACATGTTAAGTCCAGATCCAAGAGAACTTCAGAAATCCATTGAAGTTCAGTTGTTAAGAAGTTCTGTTTGTTTGGCAACTGCTTTAAACCACATAGAACAAGATCAGAAGTGGCAGTCTATTACCGAAAATGTGGTGAAGTACCTGAAGCAAACCTCCCGCATAGCTGTTGGACCCCTGAGACTTTCTACTCTAACAGTTTCCCAGTCTCTGCCAGTCCTAAGTACTTTACAGCTGTATTGCTCTTCTGCTTTGGAGAACACAGTTTCCAACAGACTTGCCACAGAGGACTGTCTTATTCCACTCTTTAGTGAAGCTTTGCGTTCATGTAAACAGCATGATGTCAGGCCATGGATGCAAGCATTAAGATACACGATGTACCAGAGTCAGTTGTTGGAGAAAATAAAAGAACAAACAGTTCCAATTAGAAGCCATCTCATGGAATTAGGTCTAACAGCAGCAAAATTTGCTAGAAAACGGGGGAATGTGTCACTTGCAACAAGATTGCTGGCACAGTGTAGCGAGGTTCAGCTGGGAAAGACTACCACTGCACAGGATTTAGTCCAGCACTTTAAAAAACTATCAACTCAAGGTCAAGTGGATGAAAAATGGGGGCCTGAACTTGACATTGAAAAAACGAAACTGCTATATACAGCAGGCCAGTCAACACATGCAATGGAGATGTTGAGTTCCTGTGCCATCTCTTTCTGCAAGTCTGCCAAAGCTGAGCATGCTGTTGCCAAGTCAATTTTGACATTGGCTAAATGGATCCAGGCAGAATGGAAAGAAATCTCAGGACAGCTGAAACAGGTTTACAGAGCTCAGCAGCAGCAGAACTTCACGGGTCTTTCTACTTTGTCTAAAAACATACTCACTCTAATTGAACTACCATCTGTTAATACGATGGAGGAAGAGTATCCTCGGATAGAGAGTGAATCTACAGTACATATTGGAGTTGGGGAACCTGACTTCATCTTGGGACAGCTGTATCATCTGTCTTCAGTACAGGCACCTGAAGTAGCCAAATCTTGGGCCGCATTGGCTAGTTGGGCTTACAGGTGGGGCAGAAAGGTGGTTGACAATGCCAGTCAGGGAGAAGGTGTTCGTCTGTTGCCTAGAGAAAAATCTGAAGTTCAGAATCTGCTCCCAGACACCATAACCGAAGAAGAAAAAGAGAGAATATATGGTATTCTTGGTCAGGCTGTGTGTCGCCCAGCGGGGATTCAGGATGAAGATATAACGCTTCAGATCACAGAAAGTGAAGATAATGAGGAAGATGACATGGTTGATGTTATCTGGCGTCAGTTAATATCAAGTTGCCCATGGCTTTCAGAACTTGATGAAAGTGCAACAGAAGGAGTCATTAAAGTGTGGAGGAAAGTTGTGGACAGAATCTTCAGCCTGTATAAACTGTCCTGCAGCGCATATTTTACTTTCCTTAAACTCAATGCTGGGCAGATTCCTTTAGATGAAGATGACCCTCGGCTCCATTTAAGCCACAGAGTGGAGCAGAGCACGGATGACATGATTGTGATGGCCACGCTGCGGTTGCTCAGGTTGCTCGTGAAGCACGCTGGGGAGCTTCGGCAGTATCTGGAACATGGCTTGGAAACAACACCTACTGCGCCTTGGAGAGGAATTATTCCGCAGCTTTTCTCACGCTTAAACCACCCTGAAGTGTATGTGCGCCAGAGTATTTGTAACCTCCTCTGCCGCGTGGCTCAGGATTCCCCGCATCTCATACTGTATCCTGCAATAGTGGGCACCATATCGCTTAGTAGTGAGTCACAGGCTTCAGGAAATAAATTTTCCTCTGCAATTCCAACTTTACTTGGCAATATTCAAGGAGAAGAACTACTGGTTTCTGAATGTGAGGGAGGAAGTCCTCCTGCTTCTCAAGATAGCAATAAGGATGAACCTAAAAGTGGACTGAATGAAGACCAAGCCATGATGCAGGACTGCTACAGCAAAATTGTAGATAAACTGTCCTCGGCAAACCCAACTATGGTGTTACAGGTTCAGATGCTTGTGGCTGAGCTGCGCAGGGTCACTGTTCTCTGGGATGAGCTCTGGTTGGGAGTTCTGTTACAGCAGCACATGTATGTCCTGAGACGAATTCAGCAGTTGGAAGACGAGGTGAAGAGAGTCCAGAACAACAACACCTTACGCAAAGAAGAGAAAATCGCAATCATGCGGGAGAAGCACACAGCTTTGATGAAGCCCATCGTATTTGCTTTGGAGCACGTTAGGAGCATCACAGCGGCCCCTGCAGAAACACCTCATGAAAAGTGGTTTCAGGATAACTATGGTGATGCCATTGAAAATGCTCTAGAAAAGCTGAAAACACCGTCAAACCCTGCAAAGCCTGGAAGCAGCTGGATTCCATTTAAAGAGATAATGCTGAGTTTGCAACAGAGAGCACAGAAACGTGCAAGTTACATCTTGCGTCTTGAAGAAATCAGCCCATGGCTGGCTGCCATGACTAACACTGAAATTGCTCTTCCCGGAGAAGTCTCAGCCAGAGATACCGTCACAATCCACAGTGTTGGTGGAACCATCACAATCTTACCTACTAAAACCAAGCCAAAGAAACTTCTCTTTCTAGGATCAGATGGGAAGAGCTATCCTTATCTTTTCAAAGGATTGGAGGATTTACATCTGGATGAGAGAATAATGCAATTTCTGTCTATTGTAAATACCATGTTTGCAACAATCAATCGCCAGGAAACACCTCGTTTCCATGCTCGCCACTATTCTGTAACACCACTGGGAACTCGCTCAGGCCTAATCCAGTGGGTGGATGGAGCCACGCCCTTATTTGGTCTTTACAAACGATGGCAACAACGGGAAGCCGCCTTGCAAGCACAAAAGGCCCAAGATTCCTACCAAACTCCTCAGAATCCTGGAATCGTACCCCGTCCTAGTGAACTTTATTATAGTAAAATTGGTCCTGCTTTGAAAGCAGTTGGGCTTAGTCTGGATGTGTCCCGCCGGGATTGGCCTCTTCATGTGATGAAGGCAGTGTTAGAAGAGTTAATGGAGGCCACGCCCCCAAATCTCCTTGCTAAAGAGCTTTGGTCATCATGTACCACCCCTGATGAGTGGTGGAGAGTCACACAGTCTTATGCCAGATCTACTGCAGTCATGTCTATGGTCGGATACATAATTGGCCTTGGAGATAGACATCTGGATAATGTTCTCATAGATATGACGACTGGAGAGGTTGTTCACATAGATTACAATGTTTGCTTTGAAAAAGGTAAAAGCCTTAGAGTTCCTGAGAAAGTACCTTTTCGAATGACACAGAACATTGAAACAGCACTGGGTGTAACTGGAGTAGAAGGTGTTTTTAGGCTTTCATGTGAGCAGGTTCTACACATTATGCGGCGTGGCAGAGAGACTCTGCTGACGCTGCTGGAGGCCTTTGTATATGACCCCCTGGTGGACTGGACAGCTGGGGGCGAGGCTGGGTTTGCTGGTGCGGTCTATGGTGGAGGGGGCCAGCAGGCTGAGAGCAAGCAGAGCAAGAGAGAGATGGAACGAGAGATTACTCGCAGCCTTTTTTCTTCGAGAGTAGCTGAAATTAAGGTGAACTGGTTTAAAAACAGAGATGAGATGCTGGTTGTACTTCCCAAGCTGGACAGCAGCTTAGATGAATACCTGAGCTTGCAAGAGCAACTAACAGATGTGGAGAAACTGCAGGGCAAACTGCTGGAAGAAATTGAGTTTCTAGAAGGAGCTGAAGGAGTGGATCATCCTTCTCATACTCTGCAACACAGGTATTCTGAACACACTCAACTACAGACTCAGCAGAGAGCTGTTCAGGAAGCAATCCAGGTGAAGCTGAATGAATTTGAACAGTGGATAACACACTATCAGGCTGCGTTCAATAATTTGGAAGCTACACAGCTGGCCAGTTTGCTTCAGGAGATAAGCACACAGATGGACCTTGGTCCTCCCAGCTACGTGCCGGCAACAGCCTTTCTGCAGAATGCTGGCCAGGCCCACTTGATTAGCCAGTGTGAGCAGCTAGAAGGGGAGGTTGGTGCCCTCCTGCAGCAGAGGCGCTCGGTGCTGCGAGGCTGTCTGGAGCAGCTGCATCACTACGCAACTGTTGCTCTGCAGTATCCAAAGGCCATATTTCAGAAACATCGAATTGAGCAGTGGAAGACCTGGATGGAAGAGCTCATCTGTAATACCACAGTAGAACGCTGTCAGGAACTTTACAGGAAATATGAAATGCAGTATGCGCCCCAGCCACCCCCAACAGTGTGTCAGTTCATCACGGCCACTGAGATGACCCTGCAGCGGTACGCAGCCGACATCAACAGCCGACTTATCAGACAGGTGGAACGCTTGAAACAGGAAGCTGTCACTGTACCGGTTTGTGAAGATCAGTTGAAAGAAATTGAACGTTGTATCAAAGTTTTCCTTCACGAGAATGGAGAGGAAGGATCTTTGAGTCTAGCAAGTGTTATTATTTCTGCCCTTTGTACTCTCACAAGGCGTAACCTAATGATGGAAGGTGCAGCGTCGAGTGCTGGAGAGCAGCTGGTTGATCTGACTTCTCGGGATGGAGCCTGGTTCTTGGAGGAACTCTGCAGTATGAGCGGAAATGTCACATGTCTGGTTCAGTTACTGAAGCAGTGTCATTTAGTGCCACAAGACTTAGACATTCCTAACCCCATGGAAGCATCTGAGGCCGTTCATTTGGCTAATGGTGTATACACCTCACTTCAGAATGCTTCATGCTCAGTATGGTGAATTAATCCAACCAAGAAATGGTTCAGTTGATGAAACACCAAAAATGTCAGCTGGCCAGATGCTTTTGGTAGCATTTGATGGCATGTTTGCCCAAGTTGAGACTGCTTTTGGCTTATTGGTTGAAAAGCTAAATAAGATGGAAATTCCTATAGCTTGGCGAAAGATTGACATAATACGGGAAGCCAGGAGCACTCAGGTCAATTTTTTTGATGATGATAATCACCGACAGGTGCTGGAAGAGATCTTCTTTCTAAAACGACTACAGACAATTAAGGAGTTCTTTCGGCTCTGTGGTACCTTTTCTAAAACTTTGTCAGGATCAAGTTCACTTGAAGATCAGAATACTGTAAATGGGCCTGTACAGATTGTCAATGTGAAAACCCTTTTTAGAAACTCTTGTTTCAGTGAAGACCAGATGGCCAAACCAATAAAGGCATTCACAGCTGACTTTGTGCGGCAGCTCCTGATTGGACTCCCGAACCAAGCCCTGGGCCTCACACTGTGCAGCTTCATCAGTGCTCTAGGGGTAGACATCATTGCGCAGGTGGAGGCGAAGGATTTTGGTGCTGAAAGCAAAGTTTCTGTTGACGATCTGTGTAAGAAGGCGGTGGAGCACAACATCCAGATCGGGAAGTTCTCTCAGCTGGTCATGAACAGGGCGACTGTGCTGGCGAGCTCCTACGACACTGCCTGGAAGAAGCACGACTTGGTGCGCAGGCTGGAGACCAGCATCGCCTCCTGCAAGACAAGCCTGCAGCGTGTCCAGCTGCACATCGCCATGTTTCAGTGGCAGCATGAAGATCTCCTTATCAATAGACCACAAGCCATGTCTGTCACACCTCCCCCTCGTTCTGCCATATTAACCAGCATGAAAAAGAAACTCCATACTCTGAGCCAGATTGAAACTTCAATTGCAACAGTTCAGGAGAAACTGGCAGCACTTGAAGCAAGTATTGAACAGCGACTCAAATGGGCAGGTGGTGCCAACCCTGCACTGGCACCTGTACTACAGGATTTTGAAGCAACAATAGCTGAAAGAAGAAATCTTGTCCTTAAGGAGAGCCAAAGAGCAAGTCAGGTCACTTTCCTCTGCAGCAATATCATTCATTTTGAAAGTTTACGAACTAGAACTGCAGAAGCCTTAAACCTGGATGCTGCATTATTTGAACTAATCAAACGGTGTCAGCAAATGTGTTCATTTGCATCGCAGTTTAACAGTTCAGTCTCTGAGTTAGAGCTTCGTTTATTACAGAGGGTGGACACGACTCTTGAACATCCTATTGGCAGCTCTGAGTGGCTTTTGTCAGCACACAAACAACTGACCCAGGATATGTCTACTCAGAGAGCAATTCAGACAGAGAAAGAGCAACAAATAGAAACAGTCTGTGAAACAATTCAGAATCTGGTTGATAATATAAAGACTGTGCTCACTGGCCATAACCGGCAGCTTGGAGATGTCAAACATCTCCTGAAAGCAATGGCCAAGGATGAAGAAGCTGCTCTGGCAGATGGTGAAGATGTTCCCTATGAGAACAGTGTTAGGCAGTTCTTGGGTGAATATAAATCATGGCAAGACAACATTCAGACAGTGCTGTTTACATTAGTCCAAGCCATGGGTCAGGTTCGAAGTCAAGAACATGTTGAAATGCTCCAGGAAATAACTCCCACCTTGAAAGAACTGAAAACGCAAAGTCAGAGTGTGTATAATAATTTAGTGAGTTTTGCATCACCATTAGTGACCGATGCAACAAATGAATGTTCGAGTCCAACATCGTCTGCTACTTATCAACCATCCTTTGCTGCAGCAGTCCGAAGCAACACTGGCCAGAAGACTCAGCCTGATGTCATGTCACAGAACGCTAGAAAGCTGATTCAGAAAAACCTAGCTACATCAGCAGATACCCCACCGAGCACCGTTCCGGGAACTGGCAAGAGTGTTGCTTGTAGTCCTAAAAAGGCCATCAGAGACCCTAAGACTGGAAAAGCTGTGCAGGAGAGAAACTCGTATGCGGTGAGTGTGTGGAAGAGAGTGAAAGCCAAGCTAGAGGGCCGAGATGTTGATCCGAATAGGAGGATGTCAGTTGCTGAACAGGTTGACTATGTCATTAAGGAAGCAACTAATCTAGATAACTTGGCTCAGCTGTATGAAGGTTGGACAGCCTGGGTATGAATGGCAAGACAGTAGATGAGTCTGGTTAAGCGAGGTCAGACATCCACCAGAATCAACTCAGCCTCAGGCATCCAAAGCCACACCACAGTCGGTGGTGATGCAACTGGGGGCTTACTCTGAGGAAACCTAGGAAATCTCGGTGCGCTAGGGAAGTGAATCCTGCAGGACAGCTGCACTCAGGGATACGCCCAACACCATGGCCTGCAACCCCAGGGTCAAGGGTGAAAGAAAGCAAGCAAGCTCACCGCCTGAACACGGAGATTGTCTTTCTGCCACAGAACAGCTGCAGACGTGTCAGGAGGTTAGCTGCAGAAAGAGATCGGGATGCCGCGGAGCACAGTGATTTGGAACTCCATTCCACCTGACCCCGTGTGTACAATCCAGGAAAAAAACCCAGCTCAGAAACAAGAGGAAACTGGGGCCGCGAAGAAATCACAGCCAAGGAAGATTTGATGCATTCAGATTCTTGCATAACACTTGTTGCTTAGCAACAGTACTGGTCGGGTTGACCAGTAAGTACAAAAAAAGGCTATGAGATATGAATTTCAGAAATGGACTGAAGAAGGAGAGCTATGTAACAGATACACTACATTGGAAGAACTTACTTCTGAAATGAAGGGAAAAAAACCCACCCCATCGTCGTCCTCCCCATCCCTCTCCATCTGCCCATTTCCCCCTTTACCTGATCTAGTAGATTAGCCATCTTTCGCATTCACTTTTATTTCAATCCTTATATTTCATATACTTCATCTCGATGCTGTTAACTTATATTTGGAGTGATAAACAGAAAATTTTCCAAAACCACTGATAACACGGAAAATGCAAGGATTGTTTAAAGGTCTGATGATCACATACAAAATGTAATTCTGGTTATTTAAGTCATTTCTGTGATTCTATCATGTACAGTTTCCAGAATTGTCACTGTGCATTCAAAAGTAATGAATCTAACAGACATTTGATTTAATGTACACTCCCCTTTGCTTATAGTGTACATTTTTGGGAGGTCATTCAAATTTCCCTCTTCTGTGATTGCTGTAGTATCTTCATAGAAAGTAGCTAATCCAATGTAATCTTTTACCTTTTTAAAAACCAGGATAGAGTACCTATTAAGAGTTTTACATTGTTGATGGCAGATTAACAATAAAGTGATGTTCTGGTGGAGGTAGAGTGAAATGTTTTTTTAATTCAGTTTTCTCATTTGATACTTTTAATTTATACAGTTTACAAGGTGTAAATTAAAAGTGCTTTAGTTTACCTGGCCTTTTAGGACATATACATGAAACATCAGCAAAAAGTAAGAACCAACATCTTTTATTAAGTTCCATTATTAGTGTGTGAAGTACTTTAATTTTTGCACAGTTTTAATAGTTCAGTAGTGAATTCATGATCAAGGTTTCCTTAAATTTAGCATTGCATTTCAGTACTGTGTAAACTCAACTGTTGATCCAAAATAAAAATCCAGACTAGAATAGGATTCCTAAAATCACGTATCAACACAGAGTAGAAGAGGATTAAAATCTTGATCGAGTACATTTTCCCTGCAATTTAGAGATTAGGGCTATGATCACTTTCTAGTTGCCAGTCTTCACAGACAAACTTGAAAGAAATTAAGGAAAAATTTCACATAGTTCTGGCCTTTGCTGTATTCTGATTGCCACATTAATCTGTAATCCTTAAATACTCATGGGAGAATGCATTTCAGTATCAGTGCTCTTTTAATACTTTGACAGGTATTATAAGAAAGGTGATATTTTTGAGTACCCATGTGTCTAATGGCAAGTTAAGGAAACTAGTGCATCAAATTTTACTTTCTTCATTCATTTTGAACCTTATTTTCACAATCAAAACAACCTAACTGAATAATAATGCCATACTGTGTTTTGCACACTGCTTTATTTCCCAGAGGCTGTTGCACTCATCACTTGATTACCTCTGCTGTTTCAAGATTAGTCTTTCAACAACATTCTTTGTCACAAGGAAAAACTTTTATTACAATGATAAAACCAGTTCACACTAGTTTATCCTTATAGACAGTAATCAGAAATTGCCTTTTTGTTGGTAAAGAAGAAAAATGAAATAGGTGAATTTTATTGCCTGTGAATTTCAGGCTTCAGAGGTACCTGGCACCTTATCCTAGCAAAAACAAAACAGCTTTACATAAAAAAACATGTGCCTCTGCTAAATTATCCATCACTTTTATTTTAAAATGATCCCTCAGAGAATAGTGTGACATATACATATTTGGTTGTAGGGCAGGTATGATTGATGACTTCAAAGCTTGCTCTTTGCTGCATTCTGGACAATAAGACCTCAGTCTGTACTCTGGCTGCTTCTGGGGAAGTCATTTGACAAGTAGCCTTGTCATTTTGAACTGTTTACAAGAGAACTCAACAGTTAAGAGATTTAATCAGGAGTAAAAGGCTTTGGTCATACAGCAGATTCAGAAGACAGGTCTGTATTTTGGTGATTATCTTTTAAAATGTGAAGTTCAGAGTGCTATGGTTATGAAGTCATGCATTTTTGATAATACAGAAATACCTGTGGCAAACCAGGGGTCTGCTCCACCCTCCCTCCTCCTGTCCCCCATCCCCTCTCCCACCTTCCTTCTCCCTCTTCCTCCCCATCCGACTTCTGTACTCTCACACTCTCGTGCTCCCCCCACCCTTCTTAAGATTCAGGGGTACAGAATAACTTACTTCTACAATTTGAAGTACCCTTGGAAACGGAAGTTTATCATAAGTGTTTTGCTGTCTATAATTTTCTAGAATTGCCTGAATTTTAGTTGATTTCTCTATAAAGCTGTGGAGGCTTAGTAGTCTATGGAGCTGTCTGTATTTCTCTTTTACTCTGTTTCTTTGATGTGTCTTGCAGTATCTCTTTATTTCTGGTCATGAGTTCTTCACATAGTTTGTTAGATGATTATTCTTCTGTGCCTGACACTTGTGAGTTGTTTGAGATATGTGACGTTTCTGTGTGAGAACTGATAAGCTCTTGATCTGCTCCCCTAAATTGCTCTTTTAGAGCCCAAACCCCAGGTTCAGGGTTGAGGGTTTGTAATACAAAGAAAAACTTCCATCACTACTGCCCTTAACACTTGCCTCTATTCTGTCGTATGTAGTGTTCTTAATGTCCAATGTTTGGTGTTATCTGCATTGTTTTTGTTTTTAATTGTGGTTGTTCTGATGTGTGAAATTTAAGGAAAGAGCCATTAAAAAATTCCAAGCAGGGCAATGCAAGTACAGCCAAATATTAGAGTTGATGTGCAATCTTAGGTCCTTTTAAATCTGTTGTGATATAGGCAGTACTTTGAATTGAAAAGTCTTCCTGGCCTATTTTCCTCTACATATTTGTAATTACTCTGGGGGCTTACTTGTTTTGGCAGTACTAAAATCAAAGGAGCTGGTTCTTCTTTTCTCCCAGTTCTTTTCCTATTAAAGAAGGCACCTACAATTAGCTTGTTAGCTTTTGTTCATATACATAAAAAAATCAATGAATGTTTTTCTGTTAGCACATTGAAGGTACCTTTGTTTTACATAAAACCAGATATATATGAAAACCAGTGCCCTTCCATTCTGTATCTTGAGCTTGTAAATGCCAGTAATTTAGAGCTAGGACTTTTCCCCTCTTAACTCTAGGAGGTAGACTATGTTAATTAAAGGATCGCTTAAAGAAGGCAGATTTTTTTCACTATTTGGGTTGTATTAGAAAGATTCCTCCTATGGGGAAAAACTAGCATTATAAATTTTCCAAACACTGAGGAAGAAAATCCACTGTATTATGAACCCAGAAGGGTTTGTTGCACTTTTCCTGCTTTTTTTTAAGGCCTGGGTAACAATATCACCATCTCTTTTTTACAAAAGGGCAAATGAACTGCAATTGAGAGAAGCTTTATAGGTTCAGTGGTTAGTTGTACAACATGAACCATTTAGCCTCTTGCTTTCCATGGGAATTTGGGCTTACTAGGGAAAAAGCTGTTTGTTGTGCTATTGTAAAAATGTCATAAAATTAGCTTGACTTTGGAAGATGGTAAATTTAACTGAATGTTCTGAAATGCAGACTTGCAGAATGTATGTCTTTCAAAACAGGCTTTTTTTTTTCCTTGACAGTCCAAGTTTCAGCTCCTGTTTAAAGTTCTTTTATTTTCTGGTTTAAATTTTCCTTGTATTTCCACCTGTAATGTCAGTGGCAACACCATACTTCACTTGTTAATTTACTTTACCCTTATTATATAAGAGCAAATTGAGTTGAACTGAATCTTCCTTGTTCTTAGTAACACTGTATAAATAAAAGTGGCTTCTCTGTACAAAAGGTTGCAATGCCTCCTGATGGATATAATTTTGTGATTGTATTTAAGATTAAAAGTTGAATAAATCACACCAGCTTCCTGAAAATGCTCATAATGCATCTTTTGGAAAACAAAAGTACATGGCCTACCTTGTGCATATCTGCATTAACATGGCAAAGATTGTATGAAATATCTGTTTTTCAGAAAATAAAGTCTTAAAAGACGTAGCATTTAAGCTCTGAATTTGTTGAAGTAGTTTCCGGAAAACTTAGTTTTGGAGTATGGATAGCTTTTTTAAAGCATTAATACCTCCAAAAGTTTAAAAAGTTGATTCTAAAAAAATTTATTTTACATGTTCTAATATTTTTGAATAGAAGTGGAAATTTTACTTCAGAGTTCTTAGTATTAAGGCACAATTTATTAAGCTTCGTTTTGTATATCTTTAAAAACTTCTGTAGATTATTATTGACATATTTCCTGGTGTGTGGTGTGCAAAAGCTCTGAGGGAAAACAATATCCAGCTTGTTTGAATATCTGGAAATCAGATTGCATTTGTTGCTGCCAGATTCTGTAGGAGGATCTGTTCAGTCATCTGATATATTTCAAAAGTTCACATCCTGCCTTTGTAGTACCAAAAAAAAAAAAAAACACAACCAACCCAAAACTCCAAAGGAAGCTACACCAAGGGCGGGCTGGGATTTTTAATAGGGCAATTGGAAATTTAGTTAAGGACCTTATTTCAGTGCCTTAGGCTGTTAAGTTGTAAATAAGTCTGGGAACAATGTTCCTTGAGTAACAAGGGACTGTGGAGAACTGTGCTATTTTAAATCAGTTTCTTTAGTTTTTTTCACCCACTTCAATTTCACAAGCTGATGTTGAAGTCTTTCTTCTGAAGTTGTACTTAGAACTTGGGTGAAAACCAGGCACATTCTGTAATAAAAACTGATTTCCTAAAGTACAAAGGGCAGGTTTTAAAGTCTAATAACCCCACACTTCTCCTTCGGAAGAGGATATTACTGTGCCAGTAGCAAGATTTTGCAAGCAGCGCTCTATATATTCACTAATTATGTGGCTGCTGATTGATTGGGACCTTTTTTCTTTTGAATAGGTAGAGGAGGGGCTGCTCCTCACAGTTCATAACTTATATAAAGTCTCCCGAAATGGGGTATATCTTGGCTGCATTTTCCCTACATAAAATTGTTTCCCCAGCATTTCCCAAAGGGGCACTTGACTGAAAAGTCTCCTTCCCTTACGAAGCCCCCCACCCTGCCCCGCCCCACAGAGTTTATACCTGATCAGATGCTTAATTTTTTTCAAAGTTCAATGGCAAATTTCATGCCTTTTTATGATACAATGCTTCTGCCCCCCTAGTTTTCTTAGGGGCAGCATGTGGTCTGTAGTTGTGTTGGCTCACATTTCTTTATGCCTTCCCTGAACTTTTTATGAACCTGGTAGTTAATTTAAGGAACGTTTTTAAAATAAACTTGATGGCATAATATAGATGAATGCAAAAGGATAAAAGACTGGAAGTTGAAAGCTATGGCATGTTTTTCTGAAAGAGACATCTGACCAGGTCAACATTTGGCATTATTTTGTGTTAAGTAAAAACGTTAATGCATTTTGAAATCCTGGAGAGACAATGTGTCTCACATTGATCATCTAGTTCTTAAATTGCAGTGAATTCCACTCAGGATGGTTTACATCTTTCCTTACATGAAAGGATCTGTCAAAACCAGCTCCTTTTTGGAGGGGAACCATGCGGTTTCAAGTGAGGTGTTCTATCAATAACTTCCCCAAAGAACCCATGAAAATAAACCAGTTTTATAAAGTGGTGCATTTTTCACAAGCTCTCAAACTATGCCCAGATGTCCACACCCTCTCTGCCTCCCCCCGCCCCCTCCATGTAAGGC EMBV3_14851 GCCACCCTGAGTTTGAGGAGGACAGTGACTTTGTGATCGAGATGGAGAATAACGCCAATG Gene GeneID:100141289|USP13:XM_002684902:29_cdna Constitutive 1 NULL GeneID:100141289 1 GENE USP13 NULL ubiquitin specific peptidase 13 (isopeptidase T-3) EMBV3_14784 CAGGAAACTCTACCCAACCTTCTACTCAAGCTCCTACTAAGCCACCATGTGAGAACAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13278 GACCTAAGCACCCAGGCGGTGAGATTCGGGCTGCTTTTTAACCAGGAGTATACAACACAT Gene GeneID:518515|BTBD16:NM_001038131:17_cdna Constitutive 0 NULL GeneID:518515 26 GENE BTBD16 MGC134200 BTB (POZ) domain containing 16 EMBV3_04226 ACCAGTCCCCACCCAAGCCTCAAACCCAGTTTCTACTCCAAGACTTCTGCTTCCAACCAA Gene GeneID:789284|LOC789284:XM_002691205:14_cdna Constitutive 0 NULL GeneID:789284 11 GENE LOC789284 NULL similar to hCG1989538 EMBV3_03756 CTGGGCTACCTCAGCATACATTTCTGCCACATTCTTAAGTAGCAAAAAAAGGAAAAGTGC Gene GeneID:282241|GALNT1:NM_177519:67_cdna Constitutive 0 NULL GeneID:282241 24 GENE GALNT1 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) EMBV3_41986 AGTGGACCGAGTACAACTCAGGGACTCTTCTTCATTCTATCCTGCACCCACAAGCAGGGA Gene GeneID:532644|KRT71:NM_001075970:39_cdna Constitutive 0 NULL GeneID:532644 5 GENE KRT71 MGC139857 keratin 71 EMBV3_36091 CAGAACTGGAAGGAATTCTGCCCCCAGAAGAGCCAGGACCCACGTGATCAGTAACTAGTA Gene BVT0102_142743 + 0 NULL GK000021.2:15584701-15812886 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15334 GATCTTCAAGTTGGAACAAGGAGAGCAGCCATGGGTATTAGAGGCAGGGTCTCCAAGCCA Gene GeneID:100336842|LOC100336842:XM_002688240:50_cdna Constitutive 0 NULL GeneID:100336842 6 GENE LOC100336842 NULL zinc finger protein 510-like EMBV3_12689 AAAGACTTCCACTGATGATACACTCCACTGTGAAAATTCAAAAATTTAATAAAGCCAAGC Variant GeneID:613396|TMEM192:XM_002694306:11_cdna 478^612 3 EMBV3_29736 GeneID:613396 17 GENE TMEM192 NULL transmembrane protein 192 EMBV3_11311 GGACCTTGCCAGTTTGGTTTATACCCCCAGCTTCTAGAACACTGCCTGGAATACAGTAGG Gene GeneID:512477|ZNF48:NM_001101958:299_cdna Constitutive 1 NULL GeneID:512477 25 GENE ZNF48 MGC165906 ZNF553 zinc finger protein 48 EMBV3_13394 TGCTTCTTCCTATTGCCGGAGCAGACTGGCCATTCCTACAAACATGCCTTTGCTCAGGTT Gene BVT0102_035998 + 0 NULL GK000011.2:11227723-11283272 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00030005 1 XLOC_016260 NonCoding TCONS_00030005 XLOC_016260 NonCoding NonCoding - 11:11252991-11253362 - TSS21004 371 1 TCONS_00030005_1 36 1 0 0 0 0.000249434561201409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00104673235676392 0 0 0 0 0 1.89904841276786e-05 0 0 0 0 0 noncoding ACTGGATGCTTGTTGTGCCTTGGTGGGTGGTCAGGATTTGGACCCTCCCAGAAACCTGAGCAAAGGCATGTTTGTAGGAATGGCCAGTCTGCTCCGGCAACAGGAAGAAGCAGGGACTGAGGGCTGTGGAAGGGCAGGAGGAACTGTAGCTGGGGCTGTGGCAGAAGCCAGGGGGTGAATCCTACAGCTCCCAGAATTTGTTCTGGGGTCCCAGACTGTCCTTCTGGCCTTTGGGTCCCGGAAGCTCTGGGTTAAGAGTCTGGACATGTCTTCCTGCGCTCCTGGAGGCTTATCAAAGGCTCGCTTCCCAGAGCAGCGGAGAACTCAGACCTAGGGCAGCGGTCGGCGCCGGGCAGCGCGGGCCCCTGGAC TCONS_00026947 . 5' 25265 TCONS_00026947 . 5' 25265 EMBV3_38801 ATCTCGCAAACCAAAGAAGAAGAACCCCAACAAAGAAGACAAGCGGCCCCGCACGGCCTT Gene GeneID:100337304|LOC100337304:XM_002686983:816_cdna Constitutive 0 NULL GeneID:100337304 4 GENE LOC100337304 NULL engrailed homeobox 2-like EMBV3_43219 ACCCAGTTGGCTTCACTCTTTGAGGAGTTTTGCCCTGTATCCCAAGCCCCTTTCCGGTAT Gene GeneID:510825|PPP1R10:NM_001143863:87_cdna Constitutive 0 NULL GeneID:510825 23 GENE PPP1R10 NULL protein phosphatase 1, regulatory (inhibitor) subunit 10 EMBV3_16244 GCTGGCCTTCTAATTTTGGAATAGAGTGGGTTTTGCTGCCTTTCCATATACAAGGCTACT Gene GeneID:768077|ORMDL1:NM_001077133:57_cdna Constitutive 1 NULL GeneID:768077 2 GENE ORMDL1 MGC137701 ORM1-like 1 (S. cerevisiae) EMBV3_09410 AACCATGCTCAGACACTAGCCAGGTTGAAGGGTTTCCATCTGAATTCCTTGAAGAGAAGA Variant GeneID:281295|MAP4:NM_174105:28_cdna 469^537 1 EMBV3_02537 GeneID:281295 22 GENE MAP4 NULL microtubule-associated protein 4 EMBV3_24882 ACATTCCCACCAGCAGTGTATGAGGGTTCCTGTTTCTCCATGTCCTGCACCAACATTTGC Gene GeneID:783802|LOC783802:NM_001077891:147_cdna Constitutive 1 NULL GeneID:783802 21 GENE LOC783802 MGC133521 WD repeat domain 73-like EMBV3_05448 CGGCTGAGTGTGAGGAGACCCAGGAGACAGCCAGGACAACATGTGGCGCTGTCCCCGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20914 GCTTTCCTATCTCTCAGTTTGGTCGCGTGTTTGAAAGCTTGTGGTTCCTAAGGCAGCTAA Gene BVV0101_025577 + 0 NULL GK000012.2:15522536-15590374 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038310 1 XLOC_022136 NonCoding TCONS_00038310 XLOC_022136 NonCoding NonCoding - 12:15524076-15525196 - TSS27811 1120 2 TCONS_00038310_1 54 1 0 0 0 0 0 0 0 0 0 0 3.67365289481425e-06 2.04391645155095e-06 0 0 1.68000006802282e-05 0.000722789319257735 0.000495217615733222 0 2.24025883586461e-05 9.60392888503935e-05 0 0 0 0 8.98105517408191e-05 6.18614467425684e-06 0 0 0 0.000134368333210092 0 0 noncoding 0 0 0 0 0.0291500513390297 0.850522690392595 0.0278601216197503 0.557638572934749 GTTCCCTTGACGATGAGGGCTGAGGACTTGGCTTGTGACCAGCCCCTGTGATCTCCGAGGACCTTACAGAACTTTTCAGCGCTTGTCCCAGGGCTGCCCCACTTCGAGTTTCCGGATTCCTTTGTGGGGCGGAGCCAGGTCCGGTCTGTGGGACCCACTTCGGCCTGCCAGCCCCCTGGGAATGATCGTGGGGGGCGTAGAGTCTGCAAGGGGGCTTGAGAAGGAAGGAAACTGTCAAGGAAGTTTGCACAGCTTTCCTATCTCTCAGTTTGGTCGCGTGTTTGAAAGCTTGTGGTTCCTAAGGCAGCTAAAGAATCTTCCTGTTTCTGTTTTGCGCTTAGTCTAGAATTAAGGCCTTTGAAAAAAAGGATGTGTTGTCACATTAAAGTGTAGTTGAAATAAATTAATTTAAAAAATAAAAATAAAGTGTAGTTGAGATAATAACCCAGGAGCTAGAAGGTAAACATATAAAGAAGGAGCTTTCCACCTGCCCAAATTTTATTTGGACTTTAGACTCAGTTACTCGGTACTAAAAAAAAAAAAAAAAAAAACCGGTTTAGTGACATCTTTGGTTTAAAGGCAAATGAGTATGAAACCGGAGAGATTCTTCCATTCCACAAATATATTTGTGCTCTGCTGTGTCCCTAGCACAGAGGTCCCAATTGTGAACAAGTTAAATCCAGTTCAATCCTCACAGAAAACTTCATTCTGGTAAATAAAAAATCAGACAGTTGTAATAACAAACTTCCCCATATGCACCAATAAAGCATTCCACAGAATAAGGGAGGGCAACTGTTGCAAAAGAGTAGGTAGGGCACAAGTCAGTGATGGAGGAGTCAAAAGGAGCCGGGAAAAGGGATCCTCCCTGGAAGAAGGGGTCTGGGGCTGTACTGGACACCCTCAGGGGACCCTGCAGATACCTGAAAAAAAGCTAAAACTGGAATGAAGGGGATTTGAAAACAAATGGACGTCTTCTGATAAATGGTCCACTAAGGATCGCTGAAACCTCTTGATTATTTCTGAGATGTGTGAATGGAACATTATTATCCCAGGCATAGCACAAGTTAATTATTTTCCTCAACTTTAACTTTTCAAGTTATTCAGAACCATTCCCATCACT TCONS_00036265 . 5' 1542 TCONS_00036265 . 5' 1542 EMBV3_08267 GGTACCCCTCAAGGAGACCATCAAAGGATTCCAGCAGATTTTGGCAGGTGAATATGACCA Gene GeneID:327675|ATP5B:NM_175796:923_cdna Constitutive 0 NULL GeneID:327675 5 GENE ATP5B NULL ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide EMBV3_15684 TCCAAGCCCCTTTTAGGAACGTACTGCCCTTGGGTCTCCTCTGGGACTCAGATGCCGTGG Gene BVV0102_229187 + 1 EMBV3_40426 GK000026.2:49743840-50472972 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00451 TCCTTGCCCTTCTTTCTGTAGTTAGGAACCTCTCAGAAAAGCTTTCATCGGGCATATATG Gene BVV0102_199208 + 1 EMBV3_16232 GK000001.2:111331242-111445586 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34220 AACACGTCCCCAACCGGCTCAAGGACCTCTACTTTGCCACTTGCTTTGGACGACCACACT Gene GeneID:613358|MT1E:NM_001114857:400_cdna Constitutive 0 NULL GeneID:613358 18 GENE MT1E MGC140492 metallothionein 1E EMBV3_10199 CCATCTGTAAAATGGAGGTGGTCCTGTCGGGATGAAGGGAAAACGATGTAGGTCAATGCC Gene GeneID:518159|FITM2:NM_001103095:1114_cdna UTR3_Alt 1 NULL GeneID:518159 13 GENE FITM2 FIT2 MGC155065 fat storage-inducing transmembrane protein 2 EMBV3_32627 GAGCCCATTCCTCTCACTGCTTTCTCACCAACCCTGAAACTGGAGGGCCAATTAAGAGTT Gene BVV0101_013437 + 0 NULL GK000007.2:33639123-34103593 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05934 CATGAACCCCCGCACCTGTGGCTTATTGGTCCTGGCATCATTTTTCACCAGCTTTTTGAC Gene GeneID:615841|LOC615841:XM_002688810:235_cdna Constitutive 0 NULL GeneID:615841 7 GENE LOC615841 NULL similar to hCG2044651 EMBV3_29806 CAGTTACCTGCAGCTCCTGCCCGCATCCCTGTTCGTTACTGTCTATGTTCCTGGAGAAAT Gene GeneID:535881|SLC8A2:XM_002695184:847_cdna Constitutive 0 NULL GeneID:535881 18 GENE SLC8A2 NULL solute carrier family 8 (sodium/calcium exchanger), member 2 EMBV3_13273 ACCTTCAGGCCAAGTCAGGCATCAAGATTTTCCGCTTTGTGGCCCCTCTCTACTATGTAA Gene GeneID:513953|SLC26A2:NM_001040525:52_cdna Constitutive 0 NULL GeneID:513953 7 GENE SLC26A2 NULL solute carrier family 26 (sulfate transporter), member 2 EMBV3_01494 CAAGACCAACTGGCAAATCTTAAAAGACAGGCCATCCGTGTACTGGACAGAGAGATTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00359 CCCCACCAGTATGCTTGTTAGAGAGATTAAACCAAGAGGGTGGCATTCCCCAATGTGGTG Gene BVV0101_020336 - 1 EMBV3_18428 GK000020.2:24478234-24570225 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116548 1 XLOC_070715 NonCoding TCONS_00116548 XLOC_070715 NonCoding NonCoding - 20:24528552-24529294 - TSS87016 742 2 TCONS_00116548_1 44 0.42722371967655 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.001014456021216 0 0 0 0 0 0 0 0 1.97410663004603e-06 0 0 0 NM_001103327.1 NEPN Bos taurus nephrocan (NEPN), mRNA. 1e-67 260 90.48 0.253369272237197 0 noncoding TTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTTAATGGACATGAGTTTCAGCAAACTCTGGGAGATGGTGAAGGAGAGGGAAGCCTGGCGGGCTGCAGTCCACGGAGTCACAAAGAGTCGGACAGGACTGAGTGAATAACAACAATATCCTAAGAGAAGTATTAAAATGGGTAAATGATTTTATCCTCTTTTTCACAGGCATTTGCATTTTAAAAGAGGAAGACCAAGATTCTGGAATTGGCTTTGCCAATTGCAGTACTATTTGCATTACCCAAGAAAGAGAAGGGACTGTAGAGGTCAGAGACCTTCCCAGCTAATGGTCACCCCCTATTTTGACCACAGGCCAGTCCAGCAGCCAAGAAGAGCTTTGGGAAGCAGGAAGGGAAGACAGACCCCACTGTAGAAACACCACATTGGGGAATGCCACCCTCTTGGTTTAATCTCTCTGACAAGCATACTGGTGGGGGTGGGAGGTAGGTTAAGAGGAGCAAAAACACTTTAAGAGAAGTCTGAGGATCTATCTTGCTTTTTGAAATCAAAACCAAAGTTGACATCCTACTGTATAGCACATGGAACTTTGCTCAATGTTATGTGGCAGCCTGGATGGGAGGGAAGTTTGGAGGAGAATGAATTCTTGTATGGCTGAATCCCTTCGCTGTTCACCTGAAACTATCACAACATTGTTAATC TCONS_00114841 TCONS_00114842 TCONS_00114843 TCONS_00114844 TCONS_00114845 TCONS_00114846 TCONS_00114847 . 3' 39844 TCONS_00114841 TCONS_00114842 TCONS_00114843 TCONS_00114844 TCONS_00114845 TCONS_00114846 TCONS_00114847 . 3' 40585 EMBV3_28148 TTGCGGACTACGAGAGTGGCCGGGCCATTCCCACGCGGCCGAGCGGAACATGGGCGGGAG Variant GeneID:515380|EDF1:NM_001035307:38_cdna 441^622 3 EMBV3_39849 GeneID:515380 11 GENE EDF1 MGC127033 endothelial differentiation-related factor 1 EMBV3_29544 TTAACAACCCCAGCTATGTCCGGAGCCCCTATGACCCTGACATGGATAATCGCTACCTGA Gene GeneID:506337|C29H11orf66:NM_001038044:49_cdna Constitutive 0 NULL GeneID:506337 29 GENE C29H11orf66 C11orf66 MGC134028 chromosome 11 open reading frame 66 ortholog EMBV3_41497 TCCTTGGGGAGCCAAATGCTCTGTAAAAAGATCTACTTCATCTGGGTGACACGGACCCAG Gene GeneID:785698|DUOX2:XM_002690942:279_cdna Constitutive 0 NULL GeneID:785698 10 GENE DUOX2 NULL dual oxidase 2 EMBV3_31957 TCTGACCGCTACCACGAGCAAGTCTCTGCCAAGCGCAAGGTGGTTAAGATGATGATCGTT Gene GeneID:407133|nk1R:XM_002691188:101_cdna Constitutive 0 NULL GeneID:407133 11 GENE nk1R NULL tachikinin receptor 1 EMBV3_17589 AGGAGAATTCAACCTGAGTTCGGTCAAGATTCTCTGGATGGTCGTCAGATCCGTGTAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12293 CACTCATGGCTCTGCACCAGGACTTCACACTGAAAGATGAACAGGTGCTTCCTTGCTCCT Gene GeneID:100336488|LOC100336488:XM_002687996:123_cdna Constitutive 0 NULL GeneID:100336488 5 GENE LOC100336488 NULL hCG2042154-like EMBV3_13522 GAGAGAGCAGCATTTCTAAGAAATCTGTTGTCAGCATTAGAGACCACCTATGCGACAAAG Gene BVV0102_141070 + 0 NULL GK000013.2:70691373-70727181 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046137 TCONS_00046141 TCONS_00046134 TCONS_00046142 TCONS_00046139 TCONS_00046133 TCONS_00046143 TCONS_00046140 TCONS_00046135 TCONS_00046132 TCONS_00046138 TCONS_00046136 1 XLOC_026625 Coding TCONS_00046135 XLOC_026625 Coding Coding CHD6 13:70724947-70878494 j TSS33517 10959 1 TCONS_00046135_10 2387 0.0156036134683822 37 0.928868221900929 0.00113501544588256 0.000481556844619939 0.00109869785327524 0.000142201332145805 0.000727124257364794 8.07916004009545e-05 0.000291953186948965 0.000573217248789672 0.000524494008480729 1.54437199925711e-31 4.60358152845599e-05 1.02375438553158e-05 1.13623601102455e-05 2.59792254084628e-11 8.4989437511867e-13 0.000401056868846438 2.10240872008788e-21 6.37289227193551e-19 6.24952838298162e-22 0.000824945585273367 0.000189821383603615 0.000120957081486636 0.00052497279856177 0.000152044771374674 4.3050201174078e-05 0.000706600445393765 0.000476792262533203 0.000302836069806252 0.000109907750907968 2.68181083005827e-05 NM_001243300.1 CHD6 Bos taurus chromodomain helicase DNA binding protein 6 (CHD6), 0.0 1.536e+04 99.98 0.777716944976731 NM_032221.4 CHD6 Homo sapiens chromodomain helicase DNA binding protein 6 (CHD6), 0.0 1.160e+04 83.99 0.979012683639018 TCONS_00046135_10 sp|Q8TD26|CHD6_HUMAN CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6; 0.0 4268 88.24 0.999581064097193 0 coding 0 0 0 0 -0.0268975752724023 0.794986510706123 0.00138847661084979 0.985783095069047 CTGCAGCCTGCCAGACTCCTCAGTCCATGGGATTTTTCAGGCAAGAATACTGGAGTGGATTGCCATTTACTCCTCCTCCAAGGGATCCTCCCGACTCAGGGATTGAACCCGCATCTCCTGTGTCTCCTGCACTGCAGGCGGATTCTTTACCGCTGAGCCATTGAGGAAGCCCCGTGGCTGTCATATATGACCTTCATTACATTGAGAAATAAAATAATTGCCTTTAATAGATGATAATGAAAATACAGAAGAAAGAGAAGCAGTTGTCAAGTCTAAAAGTTCCAAATCACTCCCCAATGTCTGATGCCTCTGTCAATTTTGACTATACATCCCCCTCCCCATTTGACCACAGCACTGACCAGGAGGAGAAAATCGAAGATGTTGCCAGTCACTGTCCAGCCCCAAAGGAGCTGTACGACGTTGAAGAGGAGGCTGGGCCCCTTTTCCCCAGAAAAACGGCGTCCCATAACGGTATGGAGGACAGTGGTGGAGGAGGCACGGGCGTGAAGAAGAAACGCAAGAAAAAGGATCCAGGGGAGCACGAAGGGGCAGCAAAGGGAAGCAAGGACAGGGAGCCTAAGCCAAAGAGGAAGCGTGAGCCCAGAGAGCTGAAGGAGCCCAGGAAGGCCAAGGAGCCCAGGAAGGCCAAGGAGCCCAGGGAGCCCAAGCAGAAGGACGGCACCAAGAAGACGCGGAAGCCCCGCGAGGCCTCGGGCCCCAGGGAGGCCAAAGAGAAGAGGGGCGGCCCTGACGCTGCAGCCAGGACCAAGTCCAGGAAGGCCAGCAAGGAGCAAGGACCAACCCCAGTGGAGAAAAGAAGAAAGGAAAAAGGAAAAGTGAAACCGCAGTGGAGAGTTTAGAGCTGGACCAGGGCCTGCCGAACCCATCCCTGCGGAGCCCCGAGGAGTCCACTGAGTCTGCAGACAGCCAGAAACGACGCTCAGGACGGCAAGTGAAGCGCAGAAAATACAACGAAGACCTGGACTTCAAGGTGGTGGACGATGACGGGGAGACCATTGCCGTGCTTGGGGCCGGCCGGACGTCCGCCCTCTCAGCTTCGACCCTGGCCTGGCAGGCGGAGGAGCCTCCAGAAGATGACGCAAACATCATTGAGAAGATCCTGGCATCTAAGACTGTCCAGGAGGTCCACCCGGGAGAACCCCCATTCGACCTGGAGCTGTTCTACGTCAAGTATAGAAATTTTTCCTACTTACACTGTAAATGGGCCACAATGGAAGAACTCGAAAAGGACCCTCGCATCGCACAGAAGATCAAGCGATTTAGGAATAAGCAAGCCCAGATGAAGCACATTTTTACTGAGCCTGACGAAGACTTGTTCAACCCAGACTATGTGGAGGTCGATCGCATCTTAGAGGTGGCCCATACCAAGGATGCAGAAACCGGAGAGGAGGTGACGCATTACCTGGTGAAGTGGTGCTCACTGCCCTACGAAGAGAGCACTTGGGAACTGGAGGAGGACGTGGATCCTGCCAAAGTTAAAGAATTCGAATCTCTGCAAGTGCTCCCCGAAATCAAGCACGTGGAGCGACCCGCTTCAGACTCCTGGCAGAAACTTGAGAAGTCGCGAGAGTATAAGAACAGTAACCAGCTCCGGGAGTACCAGCTGGAGGGGATGAACTGGCTTCTTTTTAACTGGTATAACAGAAAAAACTGCATTTTGGCCGATGAGATGGGCCTAGGGAAAACCATCCAGTCCATCACGTTCCTTTCAGAAATATTCCTCAGGGGCATCCACGGCCCTTTCCTCATCATCGCCCCACTCTCCACCATCACCAACTGGGAGCGGGAGTTCCGAACGTGGACAGAAATGAATGCCATCGTGTACCACGGCAGCCAGATCAGCAGGCAGATGATCCAGCAGTACGAGATGGTGTACAGAGATGCACAGGGAAACCCCCTGTCAGGTGTCTTCAAGTTCCATGTTGTCATTACAACATTTGAGATGATCCTGGCAGACTGCCCAGAGCTGAAGAAGATTCACTGGAGCTGTGTGATCATCGATGAAGCCCACAGGTTGAAGAACAGGAACTGCAAGCTTCTGGAGGGCCTGAAGCTCATGGCCCTGGAGCATAAGGTGCTGCTCACGGGGACACCCTTGCAGAACTCGGTGGAGGAGCTCTTCAGTCTGCTCAACTTCCTGGAGCCATCACAGTTCCCTTCAGAGACTGCTTTCTTGGAGGAGTTTGGAGATCTGAAGACAGAGGAGCAGGTGAAGAAACTGCAGTCTATCCTCAAACCGATGATGCTTCGGCGGCTAAAAGATGACGTGGAAAAGAACCTCGCTCCCAAGCAAGAGACAATCATCGAAGTAGAGCTGACCAATATCCAGAAGAAGTACTACCGAGCCATCCTGGAGAAGAACTTTTCCTTCCTGAGCAAGGGGGCCAACCAGCACAACATGCCCAACCTCATCAACACCATGATGGAGCTGAGGAAGTGCTGCAACCATCCCTACCTGATCAGCGGGGCAGAGGAGAAAATTCTGGAGGACTTCCGGAAAACCCACAGCCCCGATGCCCCGGACTTTCAGCTGCAGGCCATGATCCAGGCCGCAGGGAAGCTGGTGCTGATTGATAAACTGCTCCCTAAGCTGATCGCTGGCGGCCACAAAGTGCTCATCTTCTCGCAGATGGTGCGCTGTCTCGACATCCTGGAAGATTATCTCATCCAGAGAAGATACACCTATGAGCGAATTGATGGGCGAGTACGGGGAAACCTGCGCCAGGCAGCCATCGACCGGTTCTGTAAGCCAGACTCAGACCGCTTTGTCTTTCTTCTGTGCACGCGAGCGGGAGGCCTGGGGATCAATCTCACAGCTGCCGATACCTGCATCATATTTGATTCAGACTGGAACCCACAAAATGACTTGCAGGCTCAGGCCCGGTGTCACCGGATAGGCCAGAGTAAAGCCGTGAAGGTGTATCGCCTCATCACGCGGAATTCCTACGAGCGGGAAATGTTCGACAAGGCCAGCCTGAAGCTGGGCCTGGACAAGGCCGTCCTTCAGGACATCAACCGGAAGGGCAGCACGAATGGCGTACAGCAGCTCTCAAAGATGGAGGTAGAGGACTTGCTCCGGAAAGGTGCCTACGGCGCCTTGATGGATGAAGAGGACGAAGGCTCCAAGTTCTGTGAAGAAGACATAGACCAGATCCTGCAGAGGAGGACACATACCATCACCATCCAGTCTGAGGGGAAAGGATCCACTTTCGCCAAGGCTAGCTTTGTGGCTTCAGGAAACAGAACGGATATTTCCTTAGATGACCCAAACTTTTGGCAGAAGTGGGCTAAAATAGCTGAACTGGACACTGAAGCAAAGAGTGAGAAGGAGAGCCTGGTGCTCGACCGCCCGCGCGTGCGGAAGCAGACCAAACACTACAACTCTTTCGAGGAGGACGAGCTCATGGAGTTTTCGGAGCTGGACAGCGACTCTGACGAGAGGCCCACAAGGTCCCGGCGCCTCAATGACAAAACCAGGCGCTACCTCCGGGCCGAGTGCTTCCGGGTGGAGAAGAACCTGCTCATCTTCGGCTGGGGCCGGTGGAAGGACATCCTGACGCACGGGCGGTTCAAGTGGCATCTGAACGAGAAGGACATGGAGATGATCTGCCGGGCCCTGCTGGTGTACTGCGTCAAGCACTACAAAGGGGACGAGAAGATCAAGAGCTTCATCTGGGAGCTGATCACGCCCACCAAAGACGGACAGGCCCAGACACTCCAGAACCACTCAGGCTTGTCCGCTCCAGTCCCCAGAGGGAGGAAGGGGAAGAAGACGAAGAACCAGCTGCTGCTCCCGGAGTTAAAGAACGCAGACTGGCTGGCCACCTGCAACCCCGAGGTGGTCTTACATGACGATGGCTACAAGAAGCACCTCAAACAGCACTGCAACAAGGTACTTCTGCGAGTCCGGATGCTGTACTACCTAAAAGCTGAAATACTGGGAGAAGCAGCTGATAAAGCATTTGAAGGAACTCCAGCCAGGGAACTGGACGTGCCCCTTCCTGACATCGACTACGTGGAGATCCCGGTGGACTGGTGGGACGCTGAGGCCGACAAGTCCCTCCTGATTGGTGTGTTCAAACACGGTTACGAGAGGTACAACGCCATGCGAGCCGACCCAGCACTTTGCTTCCTGGAGAAAGTGGGCATGCCAGACGAGAAGTTGCTTTCTGCAGAGCAGGGTGTCACAGACGGGGCCTCAGACGTCCCCGAAAGAGGCCACACAGATAAAGAAGACAATACAGAAGACAAAGTAGACGGCCTCCAGAAACAAATGGAGAGTTCCAGTGATGGAGGTGATGGCCTTTTTGCTGAAAAGAAGGATGACACCCGGGCAGCCCAGGATGGCTCCGACCCAGACAAATCACCCTGGCCTGTTTCATCCGCACTCACTGCTCGTCTCCGACGCCTGGTCACCATTTACCAGCGCTGTAACCGCAAGGAGCTCTGCCGGCCTGAAGTCCTGGGACTAGGAAACCAGAGCTACTGGGTCCAGGAAGAGATGTTCCGGAGGTCCTCAGAGATGGAGCTCATCAACAAGGAAGCCCAAAAGAGGTGGACAAGGAGGGAGCAAGCCGACTTCTACAGAACAGTGTCTTCCTTTGGTGTCGTTTATGATCAAGAGAAGAAAACCTTTGACTGGACACAGTTTCGCGTCATTTCCCGTCTGGACAAGAAGTCGGACGAGAGCCTGGAACACTATTTCTATAGCTTCGTGTCCATGTGCCGCAGTGTCTGTCGTCTGCCAGCCTGGAAGGATGGTGGCCCCCCGGATCCCAGCATCTACGTGGAACCCATCACTGAAGAGCGGGCCGCGAGAACGCTGTACCGCATCGAGCTGTTGCGGAAGGTGCGGGAGCAGGTGCTCACGTGTCCTCAGCTGCACGAGCGCCTGCAGCTCTGCAGGCCCAGCCTGTACCTGCCCGTCTGGTGGGAGTGTGGGAAGCACGACCGCGACCTGCTGATCGGCACCGCCAAGCACGGCCTGAACCGCACCGACTACTACGTCATGACCGACCCCCAGCTGTCCTTCCTGGATGCCTACAGGAACTACGCCCAGCACAAAAGACCCGACCCCCAGGCCCCAGAGAGTCTCTGTTGCCTCTACCAGACCAACTCCAAACTGTATGAGTCTCTGGCCTATACGCACATGAGCCGGACTTCCGAGTCCCTTGAAAACGAACCCGAGAACCTCATGAAAATCGAAGCTGGAGATGATCACCTTGGTCCGCCCAGGGGCAGCTTATCTGACATGACCTGTGAAAGCTTCATCTCTAAAACTCAAGATGTCCTTTCCCTTACCCATGACGAGAGTCTGCTGCCTGGGTCCTTGGAGACCATGAGGTACGGGAAGAAGGCGCTAAGCCAGGAGCCAGGCCCTTTTCAGGGCAGCACGGGTGCCAGTACTGAGTCCAGGCAAGACACCGCGGCCATCTCCGCAGGCAGAGACGGAAACTGCCAGCCCCGGGGCCACGAGGCAAAAATAGCCTCAGACCCCTCTTTTATGGAAACTTTAGAAGCAGGAGTAGCTCAGATGAACATTAAAAATGAGAAACACCTGTTGATATCTCTTTCAAAGGAAGGGGAACTCGGCTGCAGCGAGGCAGGACCAAGACCTGAGAGAATCGGGCAGCTGGACCCCAACTGCTTTGCCTCCCCTTCCTTGGACCCAGGGAATGAGAGCGGGTTCGTTGACATGTGCAACCTGAGTGTCTGTGACTCCAGAAGAAACGTGTCATCAGACCAGCAGCTAATCGACTTACTAGAAAGCAAAAGCTTAGAAAGCAAATTGGTTTTGGGTCCGAACCACAGCGACGAGGAGGACGACGAGGACGAAAACGAGGAGGAAAGTCTCGAGCTGGCCGCAGGCAGGCGGGAAAGGCTGGCAGCGTCGCCTCTCAGCGAGCCCACCACCCGCATGGCAGGGGAGCAGAGCCTGGCCGGCTTCCTCACAGAGGAAGCCAAGAAAGGGAGCACGGAGGCCAGAAGCCAGCCTCCTGGACCACAGGGCCCTTTCCTTCCCACAGCCTGTCAGTGTCACTGCAAACACGTGGAGAGGTGGGCACGCGGCCTCGAGAAGGACGAGTTTGAAGTGGAGAAACCCCAGGCTTACCCCCCAGACCCCTTCACAAGCAAAGCCAATAATGTCACAGTGAGGGGCGAGCCCACTGCTGTCCCACCTGAGCTGCTCCAGGTGAAGCAGGAACTGCTGAAGGAACCCTGGAAAGAGAGCACAGAAGGGAACCAAGGTCTCCCTCCGTATCCTGAAGGGAGTGAGCTCAAGCCGGAAGACATGGATTATGAGAGTAAAGAGGAGTTGGATAAAGACGGGAACTGCCAGAGTCAAGATTATCCAGGGAAGTACTCTGAGGAGGAGAGCAAGAGCTCGACCTCGGGCATCACGGGAGACCTCGGGGACGACCTGCAAGAGGCGCGGGCTCCCACCATTGCTCAGCTGCTCCAGGAGAAAACGCTGTATTCATTCTCCGAGTGGCCGAAGGATCGCGTGATAATCAGCCGCCTAGATAACATCTGTCACGTGGTGTTAAAGGGGAAGTGGCCCTCCAGCCAGCAGCACGAGCCCTCGGGCACGCTGCCCACCCCCGTGCTAACCAGCAGCACTGGTCCCCGAGGCGGCATCTCAGAGCCGGAGGCATCAGAGCACAGCTCCAGCAGTGGTGCAGCGTGGGTGGCCCAGATGCAGAAGGAGAGCTTCTTGGCTCCGGTTTTCACAAAGGATGAACAGAAGCACAGGCATCCTTACGAGTTCGAGGTAGAGAGGGATGCGAAGACCCGGAGCCTGGAGCAGTTCTCAGCCTCCCACGGGCACCCCCCCATCGTCCTCAATGGCTGGCATGGAGAGTCAGCCATAGACCTCTCCTGCCCATCGGAGGGGTCCCCAGGGGCCACGTCCCCTTTCCCAGTGAGCGCCAGCACCCCCAAGATCGGGGCTATTGGTTCACTGCAAGGAGCCCTTGGCATGGACTTGTCGGGGATCCTGCAAGCTGGCCTGATCCACCCAGTGACCGGACAGATTGTCAACGGAAGCCTCAGGAGAGATGACGCTGCCTCCAGGAGGCGGAGAGGAAGGCGGAAACATGTCGACGGCGGGGTGGACCTCATCTTCCTGAAGGAGCAGACCCTGCAGGCGGGCATCTTGGAAGTCCACGAAGACCCAGGACAGGCCCCCCTGAGCACCCCACACCCTCCTGAAGGGCCGGTGCCCGCCACGTCAACCCCGGAGCCGACCCCGGCCGCTGGCAGCCCGGCCGAGAAAGCCATTCCCAGCAAGAGCCTGCTGGACTGGCTGCGGCAGCAGGCCGACTGCTCCCTCGAGGTCCCGGGCTTCGGCGCGAATTTTTCAGACAAACCAAAGCAGAGGAGGCCACGCTGTAAGGAACCTGGAACGTTAGACGTCACCTCTCTGAGTGGGGAAGAGAGGGTTCCTGCTGTCCCCAAGGAGCCCGGCCTGAGGGGGTTTCTCCCAGAAAACAAGTTCAATCACACCCTGCCCGAGCCCGTTCTCCGAGACGCAGGCCCCCGCCGCAGGGGCAGGCGGCCACGGAGTGAGCTGCTGAAGACCCCGGCCCTGGTGGCGGACGCCCCCTCCGGGATGGGGCCGCTGTTCATGAACGGCCTGATCGCCGGGATGGACCTGGTCGGGCTGCAGAACATGAGAAACATGCCGGGTATCCCCCTCACGGGGCTGGTGGGCTTCCCAGCCGGCTTCGCGGCAATGCCCCCAGGCGAGGAGGTCAAGAGCACGTTGAGCATGCTGCCCATGGTGCTGCCGGGCATGGCCGCCGTGCCCCAGATGTTCGGGGTCGGGGGGCTCCTCAACACCCCCATGGCCACCACCTGCGCCTCGGCCGTGCCAGCGCCCCTGTCAAGCACAACCAAGGGTGGCGTGTCGGCGGCCGAAAAGACTGCGGAAGACCAGCCCGGCAGCCACAACGTCAAAACGGACCCGTCGGCCGAAGACAAGCCCGGCCCTAGCCCCTTTTCCTCCGACCAGCCTGAGCCCGCAATAACTACGAGCAGCCCCGTGGCGTTTAACCCGTTCCTCATCCCAGGTGTTTCCCCCGGACTCATCTACCCTTCCATGTTCCTCTCCCCCGGCATGGGCATGGCGCTGCCGGCCATGCAGCAGGCCAGACACTCGGAAGCAGCAGGTCTGGAGAGCCAGAGGAGGAAGCGGAAGAAGACCAAGGGGGACGCCCCGAACCCCAACCCAGAGCCTGTGCCCGGGCTGGAGAGGGAGCCGGGCAGCGAGCAGAGCTGCCCAGAGCCCAGGGCCCCCGCGCCCCCCGACAGAGAACACGCAGCACAGGCCCGGGAAGGGGGCCCCCAGGACTCTCACGGTGACACCAATTAGAACTTTTTCATCGAGGAAAATGATTGTGACTTGTAAGTTTCTTATCCCATAAAGGTTTGTTACTTCCCCTCACTTCACCGTCATAAGAACCTGTGTTTCCATGAGTACTATTACCTCCCTGATTTCCTGTCTGAGAACTATGGTAACAGATGTTCATAGTCAGTCACAGGGTCTTGCCACGCCATCAGCTCCGTGTCGTTGACCTAGTATAGGAGGTGCAGAACCCCTCACTCCGTTACCCAGTCGTCCATTCCAGCGATCGTAGTTAGTGCAGACGTGGGGACACGCCCTGCCCCCTTCTCTTCCAAGTTTCCCATTTATTCGAAGAGGAAAAAAAAAAAAAAGGCAAAAGAAAGCCGGCTAGGGACTGACCAGTGCAGGGCCGAGGCAGAGAGCAGCTCTCTTTTGTTTTTTTTCCGTGAGCTGTGCCGAACGGGAAGAAGGGTAACAGGGAACCAAAAAAACAAAAGCACAGAGAAAGGAAATGCTGGTGCATATTCTTTAGTTAAAATATTTCCCAGTTTTAATCACGATTACTAAACGAGTAGGTTAGGCAGAAGTCTCTAACTAACGGTTGAAACCGCACATATCCATTTTTAAAACAGAAACCTTACTGGTAGTAACATGACTTCCCCCCACTCTATGGGTTTTCAGGCAACCTGCAGCAAGAAGACATAATGACCAGGCATCATTTCTTACACACGCACGCATCCCTCACCTCCCGAGTCAAAAGGAGATTCCCAGTACGAGCAAGCTGTACGCACCGTGGGCTGTTGCCAGCGGGGGGGTGGGATGGGGCGCGCGCCTGCACACGGCATAAAGCACACGACCGGTTCTGCCCCTACTCAGGCCTCTTAGGAACCCCTCTGGCCGCTGCTGGAGCCTCCTGGACTCTTACTTTTTGATTCCCTTTGCCAGGACCCAGGCTCACTCTGGAGCCTGCAAGAAAAATAAGTCCCCCAACACTCTTTGACACTAGCCAGGGGTTCGAGGTTGTCAAACCTACATGCGTTCCACCTTTTATAAAGAGTGCAACTGTGAGAAGTTTTTTTTCCTTCCCTCCAGATTTTTCAGTTTATATTTTACAGTCGGACCCAGATCTCAGATCATCAAGTTAGTGGAGACTGTGTTGGCAAGCTTAACATTCCCCCTCCTTCCTCAGCTGCCCAGCTCTCCGGGCAGCTCGCCCCGCCCCTGCCCACCCCTGCCCCATCTTCCTTCACCCCCCCCACCACCACCACACAGTCCCTCCTTTCTGATGGTCTCAACTCTCCATCCACAGTTCACACTCTGAGACTTGAAAGAAGCTCGTGGTTCAGTCCCCAGGGGGCACAGGGTTGTGTGGGACCGTTGGAAATGTTGGAAGCGTTACTCGTACCGGTTTCACATTTTGTTGTCAACAATTTACTGTATTTTTTTTTTTTTTTACTTTTTCTGTAACAGTTTTGCTATAATTTATCAGAAGGTCCAAAAGTTCGACATAACTATTTCAGTTTGCATTATTTATTTATGATGCTTTTGTCATTGTCTTTTATACATTTGGGATTATAAATTATGTAAATGTTAAAATGAGCATCTCAAAGAAGTCTGTTAAATCATGGCCGGGGTGGGGAAAAAAAAAAAAAACAGCTTTATTTTTAAAAAGTGGAGTCCCAGTTTTAATGAATCAGAGTTATAAATCAGAAATTCTGTAAACCAATTCCATAAGAAGAAAGGATCCAGTAATTAAACCGATTCTATTTAATGACATCTTTGTCGCATAGGTGGTCTCTAATGCTGACAACAGATTTCTTAGAAATGCTGCTCTCTCTATTTAACTAACATTTTGTTCAGTTTTGCCTCCAGTGGAAGCAGAAAGGGTTTTTTCAGCTGTTAAATCCTAAAAATCAATATAATTTATTTATGTAAAAAAAAAATCACTCAATTGATATATTTTTGAACCTTTTAAGTACTAATTTTCTTTTTATCAAGTAGGAAAAAAAAAATGTATTTGCCCTAAATCCTTAAAATACAAATGCTATAAAAATTCATGTATCTTGAAAGCCTTACTGCAAATGAGTATTATAGACACCCAGCAGAGCCTGGGTTTTCTTTGCTGTCGTTGTTGTTGTTTTGTATGGAAAGGCTGCTTTCCCCAGGTTCCACTTAGAACCTCCAGTAGGTCACAGGGTTCAGTATGGATTTGATTTAACAACCCACCAGCATGCTAAAAATCCCTTGTTATATCTTATCGAACCTGTATGTTAACTCTCTGGGTGTTTAGGCTTCTCTTTGACTGCTATTGTGTCCCTGTTTGCAAAATGAAAATGACACTCTGTGGATTATTTGCTCTGTAAGGCATAAGTGCTTCTTATGATTATTTTGACGTTTCCAAGAGCAAAAGCCAAATTTAAAACTCTCTTCAGCAAACTTGAGCCTTTTCATCTAATTCCATGTCACTCACAGCCATAACTTTTCCTTGATCGTTCTTCACCCCATGTCTTACATAATAAATTGTCTGTGGTCTCGATCCTGGATTTAAAAAAAAAACAAAAAAGTTTAAAAGTCAAATTTGTATTTGAGGA EMBV3_23659 TGTCACATTTAGGGGAGTTCAGGCTGCAAGAGCGTCGTTTCTATTCCACGTGAGCCTGCA Gene BVT0102_033025 + 0 NULL GK000005.2:112896900-112916434 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193500 TCONS_00193503 TCONS_00193505 TCONS_00193502 TCONS_00193498 TCONS_00193501 1 XLOC_117497 Coding TCONS_00193505 XLOC_117497 NonCoding Coding L3MBTL2 5:112900230-112905933 j TSS144603 4216 1 TCONS_00193505_4 230 0.283444022770398 4 0.26131182041389 5.62979642072113e-34 1.65370162425989e-21 3.67697017659432e-07 4.65813014897623e-26 4.88521406880097e-30 2.15976839867663e-17 4.30291401141991e-05 3.87903272780908e-42 0.000150233847544079 0.000288562329019285 3.57587851175465e-06 9.0329449440633e-21 5.19505572183227e-16 7.25513446652334e-05 2.3589854414402e-23 0.00021534861594593 7.48481122159774e-17 5.30191776441455e-08 4.36660781632047e-14 0.000143907942377761 3.53055902359199e-12 0.00206768208703933 0.00218078803747012 0.00240558501252121 3.90098799343165e-42 3.39797548934539e-32 0.000117684179711786 0.00172329046988745 0.0011178094850688 0.00209418529108234 XM_005207389.1 L3MBTL2 PREDICTED: Bos taurus l(3)mbt-like 2 (Drosophila) (L3MBTL2), 0.0 3820 100.00 0.502134724857685 XR_244389.1 L3MBTL2 PREDICTED: Homo sapiens l(3)mbt-like 2 (Drosophila) (L3MBTL2), 2e-94 352 78.26 0.0993833017077799 0 noncoding 0 0 1 1 0.020500514965964 0.853093417758077 0.0182148051044105 0.729185465620697 CTTGCCCACTCTGTCATATGCTCGTGCCCTTGTGCACCAGAGCCCACCACACCTCTGAAAGCCAAAGAGGCCACAAAGAAGAAAAAGAAACAGTTTGGGAAGAAACGAAAAAGAATACCACCGGCCAAGACGCGGCCCCTCAGACAGGGGTCCAAGAAGGCACTGCTGGAGGAGGACCTGCAGGCAGCGGCGAAGGCCCCGTCGGAGCCCGCCCCTGATGAGATCATCACCGTGCGTGTGAAGGAAGAGCACCTGGACGTGGCCACAGCCGACAAGGCTCTGAGTCCAGAGCTGCCAGTACCCGTCGAGAACATCAAACAGGAGACGGACGACTGAGCCTTCCTCGCTGCCAGTCAGAAGCCAGCCTAGGGCGCCGCTCTTGCCACCACGCCAACCTGCTTTACTTTGGAGACTGAGCCTTTTTGCATAAATTTTGCCTGGTACTGTGGGGGCCGGGGACCCAAGGAGCAGCCAGGGTCTCCTCTAGCCTCTGGCCTCCTCTCCAGCAAGGCCATGTGACGGGGGCTGCCTGCGAGCAGCTCCCTCTCCAGCTCGAGTTCCTGAAGCTCTTCCACACTAGTCCCCTCCACTCCCCCAACAGTGCTCCATTGCCAGGGCGGGGGCTACACACGGGAGACAAGCTGGCTAGTGGTTAGGCCCGAGCAGGTCTCGAGGTGGGGACAGACGGTCACCTGATGGACGTGAGTGGTGTGAGGGGTACAGCCTCTGCCCCAGACTCCATGCGGAACGGCCCCTCCTGCCTCGGTTGGGGCTCTGCTCCTCCTGGCACCCCCAGGAGGTTGCGGAGCCCTGTGCTGGTGCCCAGCTCTGGCAGGCAGCTGAGCAGCAGTGACCAGCATGTAGGTCCTGGTGGCTTGTGAGGTGGCCTTGATCTGTTTTCCCTTGGCATGAGTACTGACTCCATTTCCAAGAGGAGCAGAGATAAGGTCTGCTCCCTGGGAAAGGGAGCTTTCCAGGGCCTCAGGTCGGGGAGACCACACCAGTCCCTGTGCCATGGGAGTGGGGGGTGGGTGTGGGTGTGGGTGTATGCACATGTGTGTGCACAAGCATGCAAGTATCCCCGAGAGAAGGTGCCCCCAGTGTTGAACTTAGCCCAGTCTGGAGCCCAGCTGGACGGGACCTGTCCTCCTCTTCTCCCTTTCTGTTCACCAAGAACGGGTCTGGCCTTGCCAGAGTCTCAGGGCCTCGACACGGGGGGTGGTTTGCCTGCTGGGACGTGGCCCTGAAGGAGCTCCTGGAGGCAGGGATGTACTTCTTGGTCCTTTTCCTCACCGTGCATGTCCTTAACTCCATAATATGTTTTGATTCCGCTGCTCCTCTGAAAGTACATTCTAGAATTTCACCTGGTGTCTGCCCACATTTCAGCTGCTTCTGCTCTGCAGTTAAGTCTCCTTTGAAGCTGTCTTCTCCCTCTGACTCACCCTCTCTTCAGGAGACCTGGGACCTAAGTGGTAACAGGCTGCTGTCCTCAGCCCTTCTTTTTCCTTCCGCGTGTTTGAGTAGAGACAGCATGGCTGAGTGTGTCCCTGTGTTCCCCTGTAATAGCTGCCACGGCCCATGCTTGCCTGATGGGGTGCTGACCTTGGGTGTGTTGAGGACCCTGCTGTTGGGTGTCATCCCAGAGATGGGCAACCAGCCCAAAGGGAGCCAGTTTCAGTTCAGAGAGAACCAGATCATTTGTCCTTTCCTAAAGGCACTGTGCAGGCTCACGTGGAATAGAAACGACGCTCTTGCAGCCTGAACTCCCCTAAATGTGACAGGGGCTGTGCCTCCCCTCACCCCACCTCACATTGATGGGTGGGTCATTGGAGGAAGGTGGCCGACAGTGGCTTGCAGTTCCACAGCCTGCTCTCATCACCTGCCTTTGTTGAGGGTGACTTGCCCAGCTGAGAAGAATCATTTTCCCCTATGCTCTTGCCCTTAAAGGATCAAGTTCTGCCTGAAGAGCTTCTGGGGCGATGGGACTTGTTTGGCTTTCAGTTTCGCTTCTTCCTAAGTGAAGAAGTTGATGCCCACAACTTGATGCTTGGGTGCAGCAGGCAGGGCTAGAGGACAAGTTTAGCCACCGTTACAGCCCCAGATGGGCTTCCCACACCTAAATCCTATGAGACGATTAAATCCCTTTCTTGCTGCAGTCAGTCTGTCAGTGTTCCTTCTGAGACACCACCCCACCAGGTCGGTTACAGAGACGGGGAGAGTTCATCCGTGAAGAGTGCAGAACAGCACGTCTCCACAGCAGTATGCTATGTTATTTGTCCCTGCCACTCCCCTCCCAGGACCCCGGGCTCCCCAAAGGCCCCGCCCGTGTCTTCATGTCCCTGGGACCTAGAGGTTAGTCGGTCACAGACGGGAGTGTCGACCTCCAGGGCGTTTTAGCTCAAGGCACAGAATGAACCTTGTCCCTCCACTGCCCTTGCCTATGGATGGGACTTGGTGAAGTTCCACAGCGGTGGCGGGGGTCGGGGGCGTGGGGGACACCTGAAGACTGGAAGACATCCTGAGGAACAGAAGCCTCTCTACTCCTTGCCCCACTGCCTGACGGCCTGCAGCGAGCGGCTCCCTGGTACAAACACTGGTGGAACCCCCTGCACCTTCCTTTACTGTCACCCCGTCGGACTCGGCTGCTCGAGGGATGGGGAAGCAAGGGATTCCACATTTGTGACAGCCTCATGCCAGACACTAGTTTACAGGTGTTCACACTGCTTGCTTCATCTTTGATCCTGTGAGGATGTGCTGACTTTATTTTACAAGTAAGAGAAAGAAGGCTTGTTAAAGTTCAGTAACTTGGTGGCCTAAGTTGACATGAAATGGCAACAGTGGGATTAAACTTCATCCAGCTCGTCGGCCAGGTCACAACCAGGACTCGGTGGCTTCAATCTGGTGAGCACCCCAGTGCAGAACATTCTGCCGGGGGTCAGAGCCCGTGTCCTTCAAGGCCTTTGTATTCCTGGGAGGAAGCAGCTACTTTCAATAGAAGTAGAAACAAATCCTAGGGCTTCCCTGATGACTTAGTGGTAAATAAAACGCCTGCCAGTGCAGGAGATGCTGGCTTGATCCCTGATATGGGGACATGCCACATGCTGCAGGACAACTACTAAGCCTGTGCTCCAGAACCCAGGAGCTACAACGACTGAGCCCATGTGCAGCTAAAGCTGAAGCCCAAGAGTCACCACGGTGAGAAGCCTGTGCACCGCAATAAGGGCAGCCCCCACTTGCTGCAATTCCAGAAAAGCCCGTGCAGCCAAGAAGACCCAGCCTAGCTGAAATAAACCCCTGGTGTGATCACTCACCTAGAGCCAGACATCCTGGAATGCGAAGTCAAGTGGGCTTTAGGAAGCATCACCATGAACAAAGCTAGTGGAGGTGATGGAATTCCACTTCAGCTATTTCAAATCCTAAAAGATGATGCCGTGAAGATGCTGCACTCACTCAATATGCCATCAAATTTGGAAAACAACAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAGTCCCAAAGGCAATGCCAAAGAATGCTCAAACTACTGCACAATTGCACTCATCTCACACGCTAGTAAACTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAGTACATGAACCGTGAACTTCCAGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCCCTGGATCACAGAGAAAGCAAGAGAATTCCAGAAAAACAGCTACTTTATTGACTATGCCAAAGCCTTTCTGTGTGGATCACAACAAACTGGAAAATTCTGAAAGAGACCGGAATATCAGACCACTTTACCTACCTTCTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTATGTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTACATGCAGAGTACGTCATGAGAAACGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGACTGCCGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACACTTATGACAGAAAGCAAAGAAGAACTAAAGAGCCTTTTGATGAAAGTGAAAGAGAAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTTAGAAAACGAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAAATAGGGAAAACAATGG EMBV3_02086 GGGCTGTAACTTCTTCGTTGACACAGTGGTGCTCAGCGACAACCTCACCAAGGACTCCAT Variant GeneID:525680|UXT:NM_001037471:87_cdna 279^386 2 EMBV3_20087 GeneID:525680 X GENE UXT MGC133475 ubiquitously-expressed transcript EMBV3_32976 GCATCGCTTTGCACTTGTATGGAGATTACAGGTTTTCTGAAGGCGTGGATGGGATTCATC Gene BVT0102_125894 - 0 NULL GK000011.2:10571076-10644560 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07365 TTCCTCATGGGCAAGAATCACGCCTCCAAGTTTAAGCTCAAGGCCAAGAGACGGCGGCAG Gene GeneID:615867|LOC615867:XM_002695903:240_cdna Constitutive 0 NULL GeneID:615867 19 GENE LOC615867 NULL similar to Spermatid-specific linker histone H1-like protein EMBV3_17451 ATACGGATAGTGGAAAATAAGACCCTAGCAAAGGCTCCCCTTGAGACTCATACAGAGCGC Gene GeneID:786891|LOC786891:XM_002692117:19_cdna Constitutive 0 NULL GeneID:786891 13 GENE LOC786891 NULL similar to C10orf68 protein EMBV3_08228 GCGTTGCTTCTGGCTGGAAGTCCGTCTGAAATCTGGAAACCACACTGGACAATCTCAAAG Gene GeneID:514111|ARMC6:NM_001098966:47_cdna Constitutive 0 NULL GeneID:514111 7 GENE ARMC6 MGC159992 armadillo repeat containing 6 EMBV3_02825 ATCACACTGACCCTGATACTGCCCACCTGTCCTCAGTCTGCCCGCTGGATCCTCCAATAA Gene GeneID:789593|ZNF784:NM_001099731:202_cdna Constitutive 0 NULL GeneID:789593 18 GENE ZNF784 NULL zinc finger protein 784 EMBV3_01809 CCATGGCAACAAAACGGAAGAGAACAGAGGCCTTGGAACAAGGAGGATTACCCAAGAAGC Gene GeneID:515462|CDK7:NM_001075715:84_cdna Constitutive 1 NULL GeneID:515462 20 GENE CDK7 MGC140417 cyclin-dependent kinase 7 EMBV3_28328 CCTTTCCATAATGCTTTGCTCCTTCACTCTGTCAATGTGGTGAATTGTATTCATTGATAC Gene BVV0102_259431 - 0 NULL GK000008.2:92674693-92687846 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228633 TCONS_00228631 TCONS_00228632 TCONS_00228634 1 XLOC_138543 Coding TCONS_00228633 XLOC_138543 Coding Coding LOC530653 8:92685821-92690865 j TSS170400 2874 1 TCONS_00228633_1 177 0.311760612386917 3 0.430696014277216 0.0110538785282476 0.0110600139481634 0.00907424696972852 0.00909481939676335 0.0097088601278323 0.00190586181478428 0.00733439614276993 0.007591875778227 0.021276126766901 0.00182101051338109 0.000222870404538572 1.48924164188622e-12 0.00102420266674169 0.000890802698808514 0.00126003844752301 0.000169428985747474 0.000131708519784259 8.83548005329435e-09 0.00845980945568412 0.00457342657771256 0.00129246175786279 8.77811241851713e-05 2.98893231955513e-09 6.05552367251903e-09 0.00582954757671785 0.00508940252634121 0.00817539681245801 0.000184402057612612 5.32974636446092e-05 2.04995995398695e-09 XM_609128.4 LOC530653 PREDICTED: Bos taurus acyl-coenzyme A amino acid N-acyltransferase 2-like (LOC530653), transcript variant X3, mRNA. 0.0 4625 100.00 0.89178844815588 NM_001164565.1 Acnat1 Mus musculus acyl-coenzyme A amino acid N-acyltransferase 1 (Acnat1), mRNA. 1e-144 518 74.56 0.27696590118302 TCONS_00228633_1 sp|Q8BGG9|ACNT2_MOUSE ACNT2_MOUSE Acyl-coenzyme A amino acid N-acyltransferase 2; 5e-69 219 59.89 0.994350282485876 2 coding 0 0 0 0 -0.153422993505343 0.215502617505994 -0.0213412751649197 0.66373400704494 AAGACAAAGGGCATCCAGTTGTTGAACTAGGATTTCCCACAACATTTTAAAAGGGAAGGCCCATTCCCAGGACTCCTTGATTTGTTTGGGGGCATCGGGGGTCTAGTTGAATATCGGGCCAGTCTTTTGGCTGTCCGTGGCTTTGCAGTGCTGGCTTTAGCATATTTTGCCTATGATGACCTGCCCAAGCAGCTGGAGGAGGTGGACCTGGAATATTTTGAGGAAGCTGCCAACTTGCTACTAGCTCATCCCAAGGTCCAAAAGCCGGGAATTGGAGTGATATCTGTGAGCAAAGGTGCAGAGATTGGGCTGGCCATGGCCTGCTACCTCAAGCAGGTGGCAGCCACTGTCTGCATCAATGGGGCCAATGCCATCCATGAATTTCCGCTCAGGTACCGGGATCTGGTCATAACCCCCATCCCCTCGTTTCCAGAGCGCATGCAGGTCAACGCTGCGGGTGCTGTGCGCATCCGCCACTTCAAGGGCGACCCCCGAGATGAACGGAATCAACATAGTGTGCTTCCTGTTGAAAAGGCCCGGGGCCCAATCCTCTTCGTTGTAGGAGAGGCTGACGAATGCTTCAATAGCAAAGAATACGCTGAGCAGGCACTGGACCAGCTGCGGAGGCACGGCAAAAGCAGTGGAAGGATGCTGTCCTACCCCGGGGCGGGCCACCTGATAGAGCCGCCCTACGCGCCCCTGTGCTGTGTGTCCTGGAGCCGCGGCCTCTTCCTCCCCATGCTCTGGGGCGGGGAGCCTGAGGGCCAAGCGGCAGCCCAGGAGCACTCCTGGCAAGAGATCCTGAAATTCTTCAGGCAACACCTTGTTCTGAGCAGAAGCACACTGTAAGGGGGGTGATGGGGGCGGGCGCGGGGGGCGGAGACCAACAGCAACAGAAAAGAATCAGGCAGGGCTATGGGTGAGGGAGGGGGCTCTCCTGATTTCTCTAGATTCACAGTCATCTTGAGTCAACTGGAAGAAAACTGGACAAAATCAAAGAATCATGCATCTGAAATATTTCTGATAAAATTGTATGTGCTTTGTAACTTTTTATAAATTGAATCTTAGTTGATATGCAGCAGGGTACGTTGCTCCTGCAAAATTTTGATGCCCTTGAACATTGAATAACCTTTTGTATCCCGGTTGGGGAGTCCTTGGATCCGGGTATTGCCAATCTAGATGAATTTCCTGGAACTTTAAAGTCCCTTGTGAAGTCATTTTCTGTTTAAACTATTTTGAGTTGAATTTGACATTTGATTTGAAAAGTTCTGATACCACCATCAGGTGTAGAGCTTGCTATGGATTTCCAGTAGATACCTTAACTCTATTTTTTTTTTTTTTTTTGGAATAGTGATGTTTCTTTTTCTTCCTAAAATATATTTTGTTTAAGAATTTTAAACAGGAGTGGGATTAAATGCTCATGTGCTTCTGGAGTATTTAGTGCCTAAATGAGTTATATTTAAAGTGATTACAGAAGTGCCTGGCACATAGTGATTTCAGTATCAGAGTTAGCTATTATCCTTTCCATAATGCTTTGCTCCTTCACTCTGTCAATGTGGTGAATTGTATTCATTGATACACTAATTTTTCTAATTCATCTAATTCTACTAGATCAGTTTCTCATCTTGACTAGTTTGGGTTTTAAAATTAAAAAAAAATTGGAGCTAACCTAGTCATTTATATTTTCTAAGAATTTCATCTCTATTTTCTGGAACACATTTCTCTCTCTCTCTCTCTCTTTTTAACATATCAACTGTCATTTTGTTTGCATGCTTTTGCCTTTTACTTTGAATCCGACTTGCTAAATACTTGTCTATTTTATTGATTTTTTTCCCCTAGAACAGCTTTTGGGTTGCTTAGGGGTCAAATCTAATTTTTCCTGATTCCTCAATTTCTGCTTCTTTGAAATAAGTTTATTCTTTCTGCCGTATTTGCTTTTCTGGCTTTTTGATATACTGTGTTCTCATTTTGTTAATGTCTAAGTAGTTTGTGATTTACTCCCTGCCCCTCCCTTAAACCCAAGAATGCTTTTACCAAAGTACCAAGTATCATCCTGTAGTTAACTTGTTCTTTAAAAGGGAATCTCACTTTGTATTGGAGGAGTCAGATTGTCACCCTCTGAACCCACTGACCAAGCTTAGTGTTTCTAAAAATGGTCAACTTGAAATAACATGTTTCATGATGAGATGTAATGTGGAGTGCTCAGCACTTCTTAGAACTCTTCTAACAACACTAGTAAGCTTGAAGTTTTAATGTCAAGCTTTAAATCCAGTCCGGTCAAACTTCTTACTAATGTGGTAGCTAGTGAAAGAGATAAATGGTACTTACTATAAGGAGACAACCATAGACTATCATTCTATGATCTGGTCTAGTCACAATTTAATTACCAACTGACCTGGTCTCTTTTCATAAAAATTGCATGGAAAATTTTGGAATTTTTCACTTTGTAGGATTTTGTTTTTCTTTTTGCATTGGAGCGAGCTGGGGAATTATTCAAAATTAAAAGGGATTTGAGAGGCATATCAACCAAATACTGTGTGTGGGCCTGGTTTGAACAAAATAACTGTAAAAAGATTTTTGAGGGGTAACTAGGGAAATATGAATATGACTGGATAGTAAACAATACTATGAAATTATCTTGTTAGGTGTCAGAATGGTATTGGGATTATGTAAAAGGTAACTTTTTAGAGATGGATACTGACATATTTAGAAGTGAAGAATCACAATATCTGGGAATCATTTTAAAATACTACAGGTATATGGAAAATGTAGGAAACTATTGTATCTAGATGATGCATATACTGAGGTTTGTTTTCTCTACTTTTATGTGTGCTTTCAAATTTTTAATAATAAAAGTTAAAAAATAAGGTACAA EMBV3_05512 GTTAGAAGGTGGGGGAAGGGCAGGCGTCCAATGAGTTTCTTTCCTCGTACTCTGAAATTG Gene BVV0101_064478 + 0 NULL GK000029.2:24834952-25002480 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163326 1 XLOC_099849 NonCoding TCONS_00163326 XLOC_099849 NonCoding NonCoding - 29:24867041-24868068 - TSS122409 485 1 TCONS_00163326_2 56 2 0.529239766081871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00106759519421849 0 0 0 0 0 0 0 0 0 0 0 noncoding ACCCTGACATCTGAATACTTTTAATAGCTCTTTTACTTTTAAGAGCAATGAATTTTTCAGTAAAAACTAGGTTTGAGGCAAGGGCAGGTAAGAAGCGAACAATTTCAGAGTACGAGGAAAGAAACTCACTGGACGCCTGCCCTTCCCCCACCCTCTAACCCTACACATTCCAAGGCCAGAAAAATTGTCTTCAGTCATGCATCGAAGTCCTTAAGCATTGGCTTTGGCCACATTGTTATTCAAAAGCAGTTCTGTAGGAATGAGATCAGGAACCTGGAAAATGACATTTTGAAGGGAGAAAACAGTATTTCTTTAGATGTTTGTACAACATACTCTGAAAAGGCCTCTGGTCAAATTTATCCAGAGCCAGAATGTTCATATCACCTTTCTGAATTCTGAAGATGTTAGCAGTGATGGAATGCAAAGGATCACATGGCAAATTCATACGAACATGGCACCAATCAGAGGAGATATGCAGATGACAC TCONS_00164740 r 5' 32091 TCONS_00164740 r 5' 32091 EMBV3_25647 TGGCTTATCACTCGGGCTACGGAGCCCACGCTGCACCGTTTTGTGTCCGTGAACAAACTC Variant GeneID:506336|YIF1A:NM_001034269:521_cdna 199^410 4 EMBV3_30217 GeneID:506336 29 GENE YIF1A MGC127000 Yip1 interacting factor homolog A (S. cerevisiae) EMBV3_35580 TGGCCGATCTGACAACCAGACACTCCAACTCCATCCTCTCCCCTCACCTAAATTGGCTTT Gene GeneID:526736|KLK10:NM_001075890:283_cdna Constitutive 0 NULL GeneID:526736 18 GENE KLK10 MGC139944 kallikrein-related peptidase 10 EMBV3_23056 TGGCAAAAGAATAGACAAATAGGTGGGTGGAACATGATGGAGAATCCAGAAATAGACCCC Gene BVT0102_043144 + 0 NULL GK000003.2:27324667-27337851 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41466 AGGACTGGTGACTTGACCTCATACACAGCCCATGATTCTGGATATTGCACTAAACCCAGC Gene GeneID:525942|ZNF454:XM_002688487:64_cdna Constitutive 1 NULL GeneID:525942 7 GENE ZNF454 NULL zinc finger protein 454 EMBV3_18752 CTGGTGATAGTTTCTCCTCGTTTGATACTCGCTGCCAGCTATTGGTATATCCTGGAGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19437 TTCGCCTCCAAAGGTAGGGCTGTTTCAGAGGTATGGGCATCTTAGTTTTGTGAGACAGGC Gene BVT0102_154972 + 1 EMBV3_24676 GK000019.2:51637710-51640322 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22327 TGGTGTCTGTTTCAGTCCCTGAAGACTGTGAGCCAGTGCCTTTCCTTCACCTGGAGATGG Gene BVT0102_105342 + 0 NULL GK000028.2:26786029-26794898 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159357 TCONS_00159359 TCONS_00159358 1 XLOC_097399 Coding TCONS_00159357 XLOC_097399 Coding Coding EIF4EBP2 28:26764733-26791995 = TSS119432 7202 1 TCONS_00159357_2 120 0.094140516523188 3 0.735923113605517 0.000806919616278439 0.00063085554437017 0.000840614867533216 0.0001956135370323 0.000725989578063308 0.000168328314452951 0.000665511566802702 0.000521806112527338 0.00168145027463382 0.000412904585449117 0.000246099972417955 0.00013629296596304 0.000216446309483192 0.00035509286876113 0.000692886964952151 0.0106750105378483 0.0101328999270707 0.00661567320956188 0.000720366093668796 0.00156788048846604 0.000444701130362908 0.00648709840291479 0.00451597409823913 0.00385742113781376 0.00122442719277676 0.000631656657862534 0.000814643711207068 0.000977344193936668 0.000506811392540809 0.00125429110731631 NM_001191149.1 EIF4EBP2 Bos taurus eukaryotic translation initiation factor 4E binding protein 2 (EIF4EBP2), mRNA. 0.0 2136 100.00 0.164259927797834 NM_004096.4 EIF4EBP2 Homo sapiens eukaryotic translation initiation factor 4E binding protein 2 (EIF4EBP2), mRNA. 0.0 2504 77.74 0.423771174673702 TCONS_00159357_2 sp|Q13542|4EBP2_HUMAN 4EBP2_HUMAN Eukaryotic translation initiation factor 4E-binding protein 2; 1e-84 246 99.17 0.991666666666667 1 coding 0 0 0 0 0.0450842759504425 0.717722587149725 -0.0219860363878425 0.692774164355728 NNCCCGCCTGCCCGCCCGCCGGACAAAGCCCGAGAGCCCGCGCCCAGAGCCATGTCCTCGTCCGCCGGCAGCGGCCACCAGCCCAGCCAGAGCCGCGCCATCCCCACCCGCACCGTGCCCATCAGCGACGCCGCGCAGCTACCTCATGACTATTGCACCACGCCCGGGGGGACGCTCTTCTCCACCACACCGGGAGGAACTCGAATCATTTATGATCGAAAGTTTTTGTTGGATCGTCGCAACTCTCCTATGGCTCAGACCCCACCCTGCCATCTGCCCAATATCCCAGGAGTCACCAGCCCCGGCACCTTAATTGAAGACTCCAAAGTAGAAGTAAACAATTTGAACAACTTGAACAATCATGACAGGAAGCATGCAGTTGGGGATGATGCTCAGTTTGAGATGGACATCTGATTGTCCTTTGAGGATCAGAAGAAAAGCAGCAACACTGATACATGTGTGTACTTGATTCGGCTGATAGGATCATCGATGCAAAGACAGAAGAGGCAGTACCAGCAATCCCCGTTGCTGTCTCCTTCCCCTCCTCCTTCCCCTTGTGCCAAAGGATGCAAAGATGAGCTGCATCTGACCATTTCTTCTCCCTGTTTCCTGTTCCCCTCCCAGTTAGACAGTTAGATTGAAGACTCTTGACATATTTCTGTAGAACTAAGCAGCCCATAGAGGAAAACAGTTAAACTCTGGTTCCCCTCCCCGCCCCCCATTTTTTTTAATCCCAAATCCATTATCAACCTACTAATAACTGACTGGCTGGGGAGTCTGGGGAAGTGATACAGAGGTTTGATGGGTTCAGCATCATTCCTGTTCTTATTCTCTCTCCTCACTGTCTTGCCCAGGTTTCAGTCTTGCAAGAGCCTGGGTTTGGGGGTCTTGAAAACCACTGGAGGGAAATGGTAAACAGGAAGAGAGCTGCTTTCCTTTTTACTTTGCGGTGTTTGTCCTTGGGGATAGTACACAGTTTGTACAACTCGAGTAGCATTACCCTGGGGCACTGTTTTGAGGTCCACTTCCCCTCCTTCCTCTGGGAGGAGTGTATTCTGTCTTTCGTACTATAGTTCATCTTCCTGTTCCTTTACTTTGCACAGTTGTGCAGACACTTTCTAATTCTACGTCAGAAGGGAGTCCTGTGTCACCAGTTGTTCGTTGCCCCGCTTCTCCCATCCCTCCATGACTGCATCCTGTTGCCTGTGGTCCTTTTGTACCCTGAGCTATCCAGGTGGTTTCTCCTGCTCCCGAGCAGGTCCCTTCCATGGGACAGAAGCACATTGGATAAGGCCTAACGGTATACTCTGCAGGATGGTACCCAAGAATGACCTCGGAAGACGCTGAAACTTTTGAGTACCCTACCCAGGCCCAGTAGTCATTGTTTCTCAGTCCAGTGAGCATTGTGATATTTATTGTCTCCGATTTTTTAGTTTAAAGTTGACTTTGAGAGTGTTCTTAGCAAAGAACTACACTTTTTTCCTTTGTGGACCTGCTTTGTTTGGCTGCTGAGATAGATAAGCATGGGCTTAAAAACGTGTTCCTTCCGTTCTTACCCTTCCCAACGTACTCTGAATTCCCCTGTCTTTCCCTGCCTCCTTCCCTTTTCTCTGCCAGGCCATTTTTCAAATGTACATCCAGGATACCTCACCTGTGGTATCTGATAAGATCTGTCACTCCTCTTATCTGAGGAGTGACCTTTTATTTTTAAGATGAGTACAGACCTATTTTTAGATATGTTTTCAGTACAATTTTGAACAGCAACTTTTTAATTATACATCTTCCGGTGTTAGGAAGGTGAGAACTGTTCCTTGGTGAGTCTGCTGTTCCATGTCACCAGCCCTTGTCTCCCCCGGTCCCTTATGAACTTGTTCCTCTTGCTCTAGTGTTGGCTGTGCATGTTTGGAGTTCGTAGTGGGTGGACTGTGAGACTGGACCATTCTGCCTTCCCTGGGTTGTTCATGGTAGCCTCATTCTCTCCCTTTATGCTGTGCTGCTTCGTTCCCCACCCCATGGTCCTGACTGTTGACTGGCATGGGAATCCTGGAAGAGTGACTCCTCTCACGGAAAGACAAGTAAAATAGCCACTGGTGTCTAGGAATTTCTGGTTGGATTTGGTGCTCCGAACCATCTTTTTAAGAGGCGAGATACCAGGGTGAGAGTACCAGGCCAACTGGCTAAGATGGAAAGCTGTTTTTCTTTTGAACTCTGAGAAGCCCCTGTTTGCGAATACATTTAGAAGAGACTAAGGATGTCTGTGGAACTTTGTTCTGTTTTCTGCTACAAAATGTGAATTGTTTAAAGAGTGAAATCTTTTGTGATGGTTGATGTCTCAGGAATAAGCTGGATCTCCACGGTTTTGGAGATGCTTTCAGTCTCAAGAATTGACCAGAAAAATATTTCTTACTGCTTTTTTAATGTATCTCTGTTCTGATTTTTATTAAACTCCAAATTTCACTATACTTACTCTTGGAAAAACTTAAGGTGTGTTGGTAATTTGCATGACAAGCTTGCACAGGACTTCGTTGTCCCCTGGGAGCTTGTCCCCTGGGAGCTTGATTCTTTGGGAATGAAGCTTGCTTTCTCCACATCATCTGGAATGTGACTCCACTACAGCGAGTAATCGTTCTGTCAGTGAGCAGAGTGCGTGCCCTGTTGGGTCTTTACTGCTGCACGTGAAAACTCGGTTCCCTCACTGAATAGTGGGAAATTAAAACACCAGCTTGAGTAGTCTAAAGACGGTATGATCCCCTTTGTTGCTATCTCGAGGAGTCTGCACTTGGCCTCCTAATCAGAGGCTGTATTTCTAGTATGTCTTGGGAGCATCAGCTGTATAATATAGCAGCTGCCCATCCTGTAGGCATCTCTGTAAGGATCTCCATAGTGCTTGGTGCAGTTCTTTCCTGAAGGCCACTAGATTTACTTTGGCCTCCATAAATCGGCGTTTTAAAGATAATCTCACAAGGCAGTAGATGAACTTTGAACAGATGAAACCTTTGTGCCATGCCTCATAGAATCATTTTTCAGGGCAATCCAGAATCTAGTAGGTGGTTTACTCCTGGGTGTGTTTATGTGCTCAGTAGCTCAGTTATGTCTGACTCTTTGTGACCCCACCAGACTCACCTATCCATGGGATTTCCCAGGCAAGAGTACTGGAGAGGGTTGCCATTTCCCACTCCAGGGGATCTTCCCGACCCAGGGATTGAACCCACGTCACTTGCGTCTTCTGCATTAGCAGGTGGATTCTTTACCAGTGAGCCACCTGGGAAGCCTCCTGAGTGTTTGGAAGGAATCATCTAACAGTTGAAGCCCTAATGAATAATCTATCTGGGCCTTTTCGGAGCACCCTTAGGGTATCATTTGAGTGAGATGATTCTTAAAATCTTACTAATTATTTGTACTTTTCTCCTTAGGAGAAAACCATGTGTCTGTACTTCTGGGGACAATCCATCTTAATGAGATGACCTCTTCCCTCCAAATTCCAGCAGGAGATGTGCATTGTCATGGTTCTACCTCCTTCATAGTGTGGTGACTTGAGTTCACCACTCTCTCGTATCCTGTGTAAATAGCTACTGTGTTCTCTAAAGCATAGTGTAGAGAAGCCGGCTTCTAGCTATTAGGCTTCCAAGCCAAGGGTTTTATCCTTCATCCTTGTTATCTGTTGCTATTTAACAGGTTATCCCCAAACTTAAAATCTCTTTTAGAGCAAACATTATCTGTCAGTTTCTGTGGTTAGGACCTGGGAAGCAGCTTAGCATGGTGGTATTGGCACCATAGGAAGTTGCAATCAAGACTTCAGCAGGGTCTCCAGTCACTTGGGCCTTGAGAATCCACTTCTGGGCTCTCTTTGTGAGCAAGATGCCTCAGTTTCTCCCTGTGTGGGTCTGTCTAGGGCAGCGCGAGTGTCCTTACAGCATGGCAGTTGGCTTTGCCTGAGTACACGATCCCAGAGAGAGCAAGGAGGAATCTGCAGTGCCTTTTATGTCAGTCTTCGAAAGCAAATCACCACACCTTCCTATCTCTTTCCTTAGAAGCAAGCCACTAAGCCCAGCTACACTCAAGGGAACTGGGGTTACACCCCACCTAATGAATGGAGCAGTGTCAAAGAATTTGTGGATATACCTTAATATGACCCCTCCCCCAACAGAGGGTGAAACTAGATCAGCAAGAAGGGCTATGTTTAAACTAGATGGTATACTGAGAGAAGTGGTGTTGCTGAGAATAGTTCTCTAACATATACATCAACAAACAGATGAAAAATGGACTGTCCATAACCATCTGCCAGTTTTGAGAGAGTTGGCAAGAAATGGCCATTTCCAGGGTAGCATTTGTACACTGTCCTGTTGTACACTACCAGTGGCCCAAGGATGCTTCAGTCCTTGACTTGATACCTCTAAAAGACAATACTGCTGGCTCGCTTTCTCCTTTAGCCAGGAATTGACAAAGGGCATTGGAGCCTTCTCGTTGAGCCATTCGAATGGATCAGTCGGGGTTGTCAAACAAAGGGAGCAAACATGAATTAGGTGGTGGGTTACTGGGCTGAAGAATAGCTAACCATTCAGATCCAGAGTAACAAAGCTGATAGTATCCAGAAGCCAGGTCCCCCCCAGTTGATGCTTGGCACCTGCTCTCTCAAACCACGCCAGCTAAAGCAGACTTGGGTCAGGTCTCCCACCCAAAAAACCACCTCAGTAAATGGGGGGGACCTCTGGGAATAAGAGCTGTCTGTGCTTGATCTTTACATCCAGTAAAAGTTAACTCTGCACACCTGCCTCACCCTGGGCTTCCTAATGGAAACAGGTTCTTAAAAAGAACCAATCCTGTCTTCACCCTTGAGAGAAGCTTTGATGAAGCTCGTCAGTTTAGCACATTTTTAGTGAATGTCTGTTCTGTGTCCCTGGCACCGATGCCAAGTTTTTGGGGGTTTCAGACATCTTAAGGGTGCAAATTCTTTAGATTTACACTCTGACACTTCCCAGCATTTTCTTATCTATAGCCCTGCTTGCTTTAGAGTATACTTGAATAAAAAGCAATGCTGCTAAGGCAGCTATTTAAAAAAAAGAAGAAAAGGTACTTCTAGAAGTAAGGAACTTGTCTTTAAAGCACCTTCAAACGAATTTTTTTACTTCTGATTTTAAGGTGGAGTCAAAATAGATGGTCTTTATTTTTGCTGTCTGGGTTACCAGCTCTTTGCATCTCTCAGACCTCAACTTCCCAGTTCAGACATTTCCTGCTAGATGTATGGGCTTTACCCCAGAGGCTGTCGCTCAGCCAGTGCCTGCTTTGCATCAAGGCACCTGGTGTAAGGTGCTTATTGTATTGGCAGCAATATTCCAGAAACAGTCCTTTTCCGTTTTCATCTTGGAGACTTTATGGGGTATCAGTATCTTGGCTGTTTGAAGCCACGGCCCTCAGCCCCTTATATTCCCCTCCAGACAGGAGAGCCAGTGCTTGTCTCTCTGGGTCAGAACTTACCCGTCTTAGCATGTCTCTGGACTATATGCACACGGGCAGCTATTTATTAATCTGCGAAACCCAATCTCTTACCTATGCATGGCATCTAGGAGGGGTTAGTGTCTGTTTTAAAGAAGCAGTGTTTACTTGGGAGGGCAGTTTCTGTCTGGACTTCACAGGGGGCATAGTGACCATACAGTGGTACCCCTACCACCACCAACTTCTTTACCTCCCAGCTATAAATAAAAGATGACATCAGATCTTGAGGCAGCTGGGTCACAATTATTTAGAATGCTTATACCCCAGGCACATTTCTTGTTGTAGTCATGTTTTCCCAGCTGAGAATTGGAGTTCCCCTGAGCCTAGCTCATGACATTTCTGACTGCAGTCTCAGGAATGATACAGTCAGTTCATGTCACCTTTCCCACCCTGCGGAATTGACATTTCTTTCTCTGGATGGGCCTGGAAATTGTTACCTTTTGGCAAAGCTTAGATTTAGGAGAAGTCTTTAAAGTCCCTTTTCAGATGATCTGTGGTGTCTCTTTGCTTCTGCCTGCAGCCCTGGCAGACCGTACTGCCTGGATCCTGAATGGAAAATAGTACTGAGATGAAACACATTCTTGGGGTATTTAAACTTTCACTCTGCCACCTTTCAACGAGTGGGAGGCTGGCAGAGAGATGCTGCAATGCTTGAAATTTGGCCACATTGAAATTTCCAAAGGGAGCTCTTGCCAGTGCTTAAAACCAAAATTTCTGGACATCTGAGATTGCGTGAATCTAGCGGAGTATCTCTTCTTGCCTGCAGTGTGCCCTTTTCCTCTCCCATCTTAATCTTTAAAAAAAAAACCAAGCCCAGGCCAAGGGTCATTTTTACTTGAAACCAGGAGAGTGAGGAAGGAACACTAGAGCTGAGGAGTGAGCTGTGTGGTGAGGCGTCCTGCTCCTGGTGTCTGTTTCAGTCCCTGAAGACTGTGAGCCAGTGCCTTTCCTTCACCTGGAGATGGAACCCATCTCTTCTCACCTGGGTGAGGAGATCCTCTGCTACCCAGGGGTAAATCGACACCCACATATTCGGGTGTCCATTTTAAGCATCTTTAAAATACTTTATATATTGAAATGCCCTTCCCTGTCTTTGTGCCACCAGTGGCCCAGTTCCATCCATTCTGAGTGGAAAAGTGGAGACTGCCAGTACTTTCCTTGGTCTTCCCTTTGTCTCCCTTGATGTGGGTGTCCCCTTTCCCCTCTGTCCATCTCACTGTCGTGGATGGAGAGCAGAGGGCACCGTGTAATCCTGAGGCAGCCCTGTGTGACTCCATGGTTAAGTTTTTGTTTCTGATTTTCCTAACTGTCCTTACAAACCAGCAAGTGTTTGGAAATTATGGAAAAAATTAAATTTTCACCAACGGTTGCTGTTACAGTTGAATCAATAAAGATCTTGAGTATCAACTTGGTGTTTTAATTGTTTTTTTAAATTTCAGGTAAAATCCTGTTGACACATTTTGGGCATCTTGGCTGATAAGGAAGATGTGCAAAGGCAGTTGGCCACTTCACATGTCAGTTCCTTCATTTACAAAGCACTTCTTTGTGTGTCTGGCCCTGTATGTGTCAGGTGATGTGACCCTTCCCCAGGGAGCTTGGAAGTGAACACGTACATGCTGGGGCCAGATGCACCCGAGAAGGCCCTTCATTGGGTCTGCAGGGAGCCCAGACCACAGCTTTCCTGGTGAGGGCTGCCTCTGCCCCTCAGG EMBV3_21535 GAAGACAAACACCTGAAAATTCGTATTTCTCATGAATTAGATAGTGCCTCTTCTGAGGTC Gene GeneID:281499|SPP1:NM_174187:141_cdna Constitutive 1 NULL GeneID:281499 6 GENE SPP1 NULL secreted phosphoprotein 1 EMBV3_28334 TTAGCAACAAGAATGCCCTCTCCCCCTCCTCTATCTGCTAAGCCGTCGCTCATAACCTGT Gene BVT0102_145395 + 0 NULL GK000004.2:32222389-32250990 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42246 AGCCATGGGATCATATTCTGAAGGCTACTTAAAACATCTAGGAGGGTTTGGGAAGGGCAG Gene GeneID:510330|DYNC1LI1:NM_001046052:80_cdna UTR3_Alt 3 NULL GeneID:510330 22 GENE DYNC1LI1 MGC137616 dynein, cytoplasmic 1, light intermediate chain 1 EMBV3_34794 TGACAGCTTATGTGGCAGGCACCAACACACTGAGCGGCAGCATCGCCCCGATGGACACCT Gene GeneID:521401|AMDHD2:NM_001101104:204_cdna Constitutive 1 NULL GeneID:521401 25 GENE AMDHD2 NULL amidohydrolase domain containing 2 EMBV3_40286 AAGAGCATGTGCTGTGTCAGAGTTGCTGTTCCAAATTACAATGTAGGGAATAGAGGAGGG Gene BVV0102_000698 + 0 NULL GK000019.2:9333407-9351921 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38519 GAGAGAAACAAACTTTTCAAGGCTTATATTCAACCATGGACTTTATAAGCCAGTGTTGCC Gene GeneID:535408|ELAVL4:NM_001081606:91_cdna Constitutive 3 NULL GeneID:535408 3 GENE ELAVL4 MGC140771 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) EMBV3_05732 CATCTTGGATGGCACAGTAGATGCCCAAGGAGGTGACAGCATTTTGCAGAGATTGAAACG Gene GeneID:615687|TMX3:NM_001102289:124_cdna UTR3_Alt 2 NULL GeneID:615687 24 GENE TMX3 MGC152463 TXNDC10 thioredoxin-related transmembrane protein 3 EMBV3_41425 GTTGAACATGATTGTTTCTTGGACCCCAACGAGGCACCAGTACTCTACCGTGGGATTTGC Gene BVT0102_197564 + 0 NULL GK000011.2:18655423-18835046 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34180 ACTCACTCTTTGAGACTTAGTTTCCCTCTGACATTTGCTGCCTCCCCCCGCAAGGTGGAG Gene BVT0102_179399 - 1 EMBV3_10151 GK000024.2:46862096-46885278 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27521 ACCTCTTGTTTTGGAAGGACGAGAAGCTCAAGATCGGCATTGGGGTTGGCAACCTACAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10823 GCAAAATCAGTCGCCTTCGCCGGGAGTGTCCCTCAGATGAATGTGGTGCTGGAGTTTTTA Gene GeneID:100139249|LOC100139249:XM_002686046:254_cdna Constitutive 0 NULL GeneID:100139249 3 GENE LOC100139249 NULL similar to ubiquitin and ribosomal protein S27a EMBV3_40546 CTGGCAGAGACCAAACCCCAGGTCCCAAGTTCTCAGGAGGAAGAAGACTTAGCTTTAGCA Gene GeneID:508203|ZFAND2B:NM_001098906:65_cdna Constitutive 2 NULL GeneID:508203 2 GENE ZFAND2B MGC165690 zinc finger, AN1-type domain 2B EMBV3_21530 GCTAAGTTCCAGAAGCGCAGACCATTAAATAAAGGGATTTCTCCCTCTCTACCCTGGGCC Gene BVV0102_157375 - 1 EMBV3_23890 GK000002.2:24194816-24489073 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05728 GTTCTCAGCTCTGGGGTCAGTGTCCGTTCACATGGTCATGCCTGCCTTTAAAGTGTCTAA Gene GeneID:615707|TTC15:NM_001102290:25_cdna Constitutive 0 NULL GeneID:615707 8 GENE TTC15 MGC160052 tetratricopeptide repeat domain 15 EMBV3_04445 CAGAGATTATCAGTGGGCGGATGACATTTGGATGTCTAAAAAGGCTTCAGCGTAACAACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15517 CGCAGATACGAATACGACCACTGGGATGCGTTCTGTGGATCCACCATTGCCGGCCTGTCC Variant GeneID:535305|ALKBH7:NM_001046402:72_cdna 222^395 4 EMBV3_41182 GeneID:535305 7 GENE ALKBH7 MGC137333 alkB, alkylation repair homolog 7 (E. coli) EMBV3_26404 CGACTCACTCGTCCGTGGGGAGGAGCTATTTAAGGATAGATGGCACCCTAGAACTGAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20058 TTTCTTCCCGGCAACCGTACGCACCCTTCCCGCTAAACATGCCGTTCGTTGAGCTGGACA Gene GeneID:615999|DDT:NM_001099150:109_cdna Constitutive 0 NULL GeneID:615999 17 GENE DDT MGC165767 D-dopachrome tautomerase EMBV3_03915 AGGCTTTCTGGCTGTGGTCATCTTGGTGCTGATGGTGGTGAAGTGCGTGAGGAGGAAAAA Gene GeneID:538722|SCN2B:XM_002693005:196_cdna Constitutive 0 NULL GeneID:538722 15 GENE SCN2B NULL sodium channel, voltage-gated, type II, beta EMBV3_30845 GTCACTGACACCAAAGATACGAGGATAACGTTTGCCTTTGACCTGTTAGGAGGGAAACAG Gene GeneID:781681|GLDN:XM_002690925:232_cdna Constitutive 0 NULL GeneID:781681 10 GENE GLDN NULL gliomedin EMBV3_00258 TTCCCCATCCCCAACTGTCTTAAGTCTATGTGCCGTGTGAACAGAGGGTGCTCTTGGCCA Gene GeneID:541235|PPM1L:NM_001099118:161_cdna Constitutive 0 NULL GeneID:541235 1 GENE PPM1L MGC157046 MGC159398 PP2CE protein phosphatase 1 (formerly 2C)-like EMBV3_23955 ATATGAGGATAGGGTGTGAACTTTGTTGATAAGGGAGATTAAGGGAGAGACAGACTCAAC Gene BVT0102_003763 - 1 EMBV3_03796 GK000030.2:92893908-92897951 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42813 ACACAAAGAAGCCCCGGATTCAGAGAACAGTGACATACAGAGCCTCGCGTCAGAGGACTA Gene GeneID:510837|LOC510837:XM_002690985:265_cdna Constitutive 0 NULL GeneID:510837 10 GENE LOC510837 NULL similar to Uncharacterized protein KIAA0247 EMBV3_08455 AAGGGAAATTAAGTATTTTAGAACAAAGTACAATTTAACTTACAACAAATGTTTCCAAGG Gene GeneID:281124|DPYD:NM_174041:108_cdna Constitutive 2 NULL GeneID:281124 3 GENE DPYD MGC179396 dihydropyrimidine dehydrogenase EMBV3_05668 CAGACCCAGCCTTACAGCGCAAACTGGCGCGCCTCCGCCACCTTCCCCGGAACCCCTGGC Variant GeneID:533338|BCL2L12:NM_001101148:307_cdna 562^652 1 EMBV3_21154 GeneID:533338 18 GENE BCL2L12 NULL BCL2-like 12 (proline rich) EMBV3_08881 TCTTATGGCCTCATTTTCTCCAGCATCTTCCACATCCGCTCCACAGAGGGCAGGTCCAAA Gene GeneID:788554|LOC788554:XM_002699182:10_cdna Constitutive 0 NULL GeneID:788554 29 GENE LOC788554 NULL similar to olfactory receptor MOR167-3 EMBV3_14229 TGCCAAGCAGGACTTCCCACATGGCTCAGTGGTAAAGAATCCGCCTGCCAATGCGGAAGA Gene BVT0102_237988 + 1 EMBV3_30917 GK000018.2:63928471-63941395 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091826 1 XLOC_056597 NonCoding TCONS_00091826 XLOC_056597 NonCoding NonCoding - 18:63933392-63934256 - TSS69172 864 1 TCONS_00091826_1 73 0.21412037037037 1 0 0 4.65204573137074e-05 6.42638932257388e-05 0 0 0 0 0 0 0 2.64952047783193e-06 0 0 0.000228666545289069 0 0.000152844788206851 0 0.0012487355709302 0 0 0 6.8709823380813e-05 2.12362238080329e-05 0.00086830838161867 0 0 4.06885319465172e-05 0.000511386327123947 0 0 XM_001252705.3 PTRH1 PREDICTED: Bos taurus peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) (PTRH1), transcript variant 1, mRNA. 2e-47 194 87.20 0.1875 0 noncoding CACGGAGAGCGCCGGGGCTCGGGGCTCTTCCTGTAGCCCCTCTGTCCTCCCGAGCCTTTCATTTGCCACTTACTGAGGGGCTACTGTGTGCCAAGCAGGGCTTCCCACATGGCTCAGTGGTAAAGAATCCGCCTGCCAATGCGGAAGACCTGGGTTCCTTCCCTGGGTCCGGAAGATCTCCTGGAGGAGGACGTGGCAACCCACTCCAGTGTTGTTCCCTGGAGAATCCCATGGACAGAGGAGCCTGGCGGGCTAGAGTCTGACAGGACTGAGCCACCAACGACAGCACAGTTCGCCGAGCACTGTTGCAGGCGCTGGGGACAACTAGGAACGTGCCAAAATCGCCATCCGCGGAGCTGAGGTTCCAGTGTGGGAGAAATTTAATAGGAAAACAGATACTGATAAATACTGGGAATTGATACACGTTATAAAGAAAAGCAGAGCACAAGGCCATTCTTTCAGTACTTGGTTCTTTTACACCCTCTTGTTCCTATTCAGCGTGTGTCTGAAAATGTTTAATAAACTAGCTCTCGTCCAGTCATGCCTCACCTTTTCTGAAATCGCGTTATAGGATATGGAGCTTCAGAGTAACTTCTCATCAAAGGAACCAATGACAAAAACCTGGAAATGTTTATATGGAAGAAATGTACAAAATGCAAATGTTATATTTACAAAGATATTGAAACACTGTATATAGTAATAACATGTTGAATATAAACAACATGGTTAAAAGTAGAGAAATACATTTGTTTGAAATTATAAAACTAATTGTGTGATACTGAAGCAACCTGTATTTCTGGGGCTTTGTTTTTCTTAAAGGGGGAATTAATCTGTTACAACTACATTGCACTATTGGAAAGCTGT TCONS_00087643 . 5' 321 TCONS_00087643 . 5' 321 EMBV3_15804 AGCTACAGCTACAGTTATCCCCAGTACGGCTACACCCAGAGCACCATGCAGACGTATGAA Gene GeneID:532582|TRNAU1AP:NM_001075967:209_cdna Constitutive 1 NULL GeneID:532582 2 GENE TRNAU1AP MGC140234 TRSPAP1 tRNA selenocysteine 1 associated protein 1 EMBV3_32285 TGCATTGTCCTCACTATCTTTTTATTTAGGTTTGGGGTCGGGGAGGGTTGTGGGTAGGGG Gene GeneID:511951|DDB1:NM_001080262:70_cdna Constitutive 0 NULL GeneID:511951 29 GENE DDB1 MGC143388 damage-specific DNA binding protein 1, 127kDa EMBV3_35962 GGCACCAAAGCTACTGAGAACATGACACCAACTGGCTAAGACAAACTCACAACCATTCTG Gene GeneID:532890|SLC10A1:NM_001046339:151_cdna UTR3_Alt 2 NULL GeneID:532890 10 GENE SLC10A1 MGC128766 solute carrier family 10 (sodium/bile acid cotransporter family), member 1 EMBV3_35664 ACCTCATCCAGGAGACGTACCAGCTGCACCGTGATGACCCAGAGGTGGTAGAGAGCGTGT Gene GeneID:614899|LOC614899:XM_002691622:291_cdna Constitutive 0 NULL GeneID:614899 11 GENE LOC614899 NULL similar to chromosome 9 open reading frame 96 EMBV3_05205 AGGGGGTCAATCCAGACAGCTTGCTAAGGAATGTTCAAAGTGTCATTACTGCCAGCGCTC Gene GeneID:534471|INTS2:XM_002695604:177_cdna UTR3_Alt 2 NULL GeneID:534471 19 GENE INTS2 NULL integrator complex subunit 2 EMBV3_14621 TGCAAGAACCAAAAATGGACATACCAGGTGCAAAGCAGAAAGAGACAGTTGTCTTCTCCG Gene GeneID:515411|MGC165780:NM_001102023:23_cdna Constitutive 0 NULL GeneID:515411 X GENE MGC165780 NULL hypothetical LOC515411 EMBV3_32333 AGCATACGCTGCGGGTGCTGGATATGACGGGCCTGCGCCGCGTGGACTTGCGCTTCAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29513 GAACCAATGTTACTGGGTCCTTTCTAGGCTGTTGAGGGCATCCTGTCTTCTGCTGAGACC Gene BVT0102_006081 + 1 EMBV3_06231 GK000003.2:276532-329275 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171672 TCONS_00171671 1 XLOC_103894 Coding TCONS_00171672 XLOC_103894 Coding Coding SFT2D2 3:324399-345865 = TSS128014 6251 1 TCONS_00171672_1 160 0.0863861782114862 8 0.709154437456324 0.00126889461288148 0.000931179756649974 0.000991407398078336 0.000636320358205594 0.000376463276904766 0.000242645527369899 0.000605062730305968 0.000873476242162113 0.000660002311726531 2.50883168821993e-05 8.67841326352233e-05 1.44254791857879e-05 3.30476942882025e-05 1.08306969723794e-09 3.7536615989622e-05 0.00330138593724744 0.00145503153116097 5.18131446114879e-05 0.00215446088785712 0.00074730388470123 0.000194327921497383 0.000443993101478349 0.000135546022485278 0.0015325319406628 0.00152159906081048 0.00136143274506477 0.00130847693788054 0.000316227047125796 3.54123391888293e-05 0.000247597350893134 NM_001192122.1 SFT2D2 Bos taurus SFT2 domain containing 2 (SFT2D2), mRNA. 0.0 2374 100.00 0.210366341385378 NM_199344.2 SFT2D2 Homo sapiens SFT2 domain containing 2 (SFT2D2), mRNA. 0.0 841 82.22 0.133578627419613 TCONS_00171672_1 sp|O95562|SFT2B_HUMAN SFT2B_HUMAN Vesicle transport protein SFT2B; 4e-103 297 90.00 0.99375 1 noncoding 1 1 1 1 -0.0593824398388363 0.637723354691526 0.00271444641789267 0.954471954621933 GCTGTGGTTGGCGACGGCTGGGGCAGCACCCGGAAGAACCTGCGACTTAGCCAGCGCAACAGGCGGCTGGAGGGGCAGCCGGGTGGACCCGTCCCGCCATGGACAAGCTGAAGAAGGTGCTGAGCGGGCAGGACTCTGAGGATCGGGGCGGCCTGTCTGAGGTTGTTGAGGCAACTTCATTAAGCTCGGGCACCAGAATAAAAGGCTTCATTGCCTGTTTTGCTGCAGGAATTCTCTGCTCACTTCTGGGAACTCTTTTGCTCTGGGTGCCCAGGAAGGGACTATATCTGTTCGCAGTGTTTTATACCTTTGGTAACATCGCATCTCTTGGGAGCACTGTCTTCCTCATGGGACCAATGACACAGCTGAAGCGAATGTTTGAGCCTACGCGTTTGATTGCAACTGTCTTGGTGCTGTTGTGTTTTGCACTTACCCTGTGTTCTGCCTTTTGGTGGCACAACAAAGGGCTTGCTCTCATCTTCTGCATTTTGCAGTCTCTGGCCCTGACGTGGTACAGTCTTTCCTACATACCATTTGCAAGGGACGCTGTAAAGAAGTGTTTTACTGTGTGTCTTGCATAACACAGCCAGTTTTGCAAAGCTCTGGAAAACACCGTGGATGGATGTGGGTGGACCGTGTTGTAAATATCTTCTAAACCTCTGTCTCAGAGACATGTGCCTTTGATCTTGCAAGCAACACGTGGCTTGCATTTTGAACCTTTGAGGATTGGTTCTGGAGGCAACTGTGTGTTCCCAAACCCAAGTGTCTGCCACATGATACAAGAAATGGTTCTGTATCTGACAGAGTGGAATCTCCCTCATATACCTTTGGATGGTGTTCCACTGAGTTTTTATGGGTAAAAACCTTGTTAGCAGCAGCAGATAAGCCTTGGGAGCCAGTGATTCCCAGTTAGTGACAATGGCCCCATTGGATACAAAGGTGCAACAGGAAGGAATAGAGTTTGGGAATCCATGGGACTTTGTAGATTTGTCCCTCAGCGTGTCACGCCTGCCCCATACAACATGGATATACTTCTACTTTGGTGTCCAGGAACAAGCTGCCATCCTGACATTTGAACATGAGCCTGTGAAGAGCCTGGCTGTGGAATGAGGTAGAAAAGCACTTTCTGATGATGTGTGTTGTTTTTAAACCTGAACAGCTGTCTTCTGATTCCACACCTGTGAATGTATTTTCTTTCCTTTTTTTTTCTTTTATTGGAATATAGTTGCTTTACAGTGTTGGGTGGGAATGTATTTTCTAATGCTCATTGCATACTCGTCTTCTTGGGTTTTCATTTCTTTCTTTCTCCCTCCCCAATGTATCTTTACTCTTGACTTCCTGGAACGAGATTGAAAGAGAACAAAGCTGCGGCAGTAAATACTAGTGTTTCCTTTTGGACAGGAGCCAGTAGGAGGTGGAAAACCATGCTGCTCTCTGCTGTGTTCCGCCCCCACCACCATTATTTGTAAATGTTTGCTTTTAAACCGATTTTATTTTCCATTCTCCCCTGGAATGGGGCCAGGGGAGAGTAGGTGGGAAGACAGAGCCCAACCCTGGAGCCAGCAGAAAGTAGGCACGCCCACCCAGTGACCTTTAAACAGTCCCAGTGTTTTGCACTGGAGTCTGTGCTGGAAACAGTGGGAGAAGACACCAGGGGCTGCAAAGTGGCCACATCACAGCCTGAAGCCTGATCACAGACAGACTGCTTTCGTGTCCCTGATTTTGTCTAGTACTGGTAAGAGCCTTGTGATGAAGCAGAGACTGTTAACCCACTTGGCAGGCCAAAAAAATCAAGGCTCAGAGAAGTTACTAACCCTAACCCAAAATCAGAGTTGATGGCAGAACTGAGTCCTGAGCCTGGGTGCCCCCACTTCAGTCCCCTTTGTAACCCGCATTTCTGGATATGGCTCTGGTGATATCTCCTGTAACTATTTTCCCCGTTTTCATCAGCAAGCTTCTTCCTTTTCTGGCCCAGTCCTCTACATCATTGTATCTTCTCCTGCTTAGTCTCCCTGTGGGAAGCTTTCTCCTGGATCTGTGGCCTCTTCATCAGTTCTTTTGTGCGCGTTTGCCCTTCCTTGCTGCATGACCATCAGAATGTCCTGTATTGATCATCAGAGCTCTTGGCATTGCAGGGCCTCCAAAGTCTCCTTCAAAGCCAGTCTATTTGTGTTTGCCTTTCTTGTCTTCTTCCAGGTCTGGCCTGTCCACTCAGGCTCTTGCTCTGGGAGCCTCCAAACCAAACGCAGTGTTCCACCTCTTGTCTCCTTGCTTGCTAATTGCTGAATTCTTTCTTCTGCTGTAGCTGAGACCTCAGACTGGCAAGACTTTTCTTCTGATCTGGGGAAGGTATGAACAGGCCTGATGGTGCCAGAGTGAGGAACCAATGTTACTGGGTCCTTTCTAGGCTGTTGAGGGCATCCTGTCTTCTGCTGAGACCCCTAATATTCATTCAGCTAGAAGTGGAAAGTATATACCACTATCTGGGGTTACCTTAACATGCCAGGTGCTTCCAAGAGACTGCTCAGGTCTCAGAAGGACCCTGAATGGGGCCAGAAGGAAGTCAGGAGTCTTCATTGTTTCTTCTCTTTAAAGCTAATGTGAAACTAACCTGGTCTCACTGTGAGCTTCAACTAGCCTGGAGGCCACAGACAGCCATAGGATCTCTGGAGGCTACAGACAGCCACAGGGTCTCTGTGGCTGACCCCTCTGTACCTGTTTCAGAGGCTGGACTTGGACTTTGTGAGACATGAGGTTAAGGGGTCACCTGGCCTGTGTGATGTAGTGGTAGTTAATGTGGGCTATAAAGTTAAACAGGTCCGGGTGAGTTGTGGCTCAATCACATGCTAGTGTCAGGTTGAACAAGCTCCTTAACCTCTGGTCTTCATGTTGCTCATCTGTTTAAAAATAATGGGGATAATTGCTGCTGGATCATTGCAGGATGTCAATGAGAAATATGTCAAGTGCTTAGCAGGGGGCCCAGCATAGGTAAATATCTCAGTAAAAGGTGGGTATTATTATTTAAGCTTGACAATAATGGATGACCATTGAAGGTGACAGGGTGAATGTCTCTGGTCATTAATTTATCTAAAAAAATTTATTTTGTAGTATGTGTCTGGCACTATAGACATCACCATGCAACATCTCACTGAATATTCACAATAACTTTGCTAGGCTAGCAGTGTATGCTAGTTGCTGGGTTGTGTCTGGCTCTTTGCGACCCTACATACTGTAGCTCACCAGGCTTCTCTGTCCATAGGATATTCTAGGCAAGGATACTAGAGTGAGTTACCATAGACTAGCAGTCTTGTCTCTATTATTAGACAAGAAACAGCCTCGGAAAGGGTAAAGGGTCTGTACCAGATCTCACTGGCAGAGGACGCCAGTTCTTAGATAAAAGCTCCTACTTTGTCTACTCTTGAGTCCTGTGGCCAGTTTGCTCAGACAGGTCCATTCCAACACCTTAGCAGCTCGGGGGTGATCTTGCCTTCCAGGATCTTCCCAGACTCCTACATTTTTCTTTCTGCTGCCTTACCTTTTGGTTGGTTCCCTACTTGTTTTTGTCTGCCGGATTGGAGGTGCCCATTTCAAATGTACTGAAATCTGTTACCAAGCAACAGTGCCGGTTAAAAAGCAACCCCATGGATGAGACAAGGAGTGGAGAGTTAGGGCTTTAGATCCTGTGGCTGTTCGTGGTCTGTTTCCCTGCTCCTCTGCCTTCTACCTTACCTGTTCATTGCTGGGTTAGATCTTTGCATTTTGGAATGAAGGGAGCCATTGAGGTGGCTCTTTTGTAGACAAGAAATGTGTGTGTTCAAGGCGGCGCTTCCAGCAGCTGGCTGGGAGGCCGGCCTGAACGCTCCTCCTTGGCCGTGGTGGTCTGTGACCACTGTGCTGGGAGCAGCACTGCTCTCCCGTCCTGGAGGCCTGGCTTCTTAGGTTTCCCCGCCCCTTAGAAACTGCTAGTCTGATGCTGGGCCAGCGTGTTTTCTAACTCATTGCCCCCCATCTCCGGTCTCAGAGTTCTTCGCTTTTGCCTGATGTGTTCAGGGTGGCCTCTGGCTCTCCAACTTCTCTGCGTGGCTGTGCCCATGGCTATGGGCTGCTGAGACCTGGCCCAAGGTTTCCTCTTTCTCTTCCACAGACTGTCTTGTCTCTGGGAAGGAGCAAAACACTCTATCTGGCTGAGCATTCTCATTGGCCTCATTATCAGTGCTTGGAGCTTCTGTGCATCACTCCTCTGTGGTGATTGTGGATTATCCACCTGAGTGCTACCCTAATCAGTATATGCTGAGAAGCAAGAAATATAATCATGAAATGCATCTAAAATTACTTTTGGATACTTCCATTAGGAAAGATAATTAAGAAGAGGGTCATACCTTAAAAAAAAAAATGGTGTGAGGGCACTGGTTTGGCTGCTTCTGCTTTTGGTATCTCCACAAGAGTGACACATGTTATGACACACGTGATGAGACTTGGTGGAATGAATTAGAAAATAAAACTGCAGCCCTGTGACTTCAGTATTCTTTTTGTATGGGGTTGCCTATACAAGGCTTGTCTTCTCATCTCTTTCCTCAGATAACTTCTGACTAGAGTCAGCTACAGAATTACAGATACTTCAGAGTTCACAACCCATCCTTAAACTTCATTTTAAGCAAATAAAAACAACAAAATCAGTGTTTAAGGTTTATAAAGTCATTTTGCTAGATAGTAGGCATCATTCTTTTGATTTTAAAATCCAAGACTTAAGTTTTTAGATACGCAGTAGTTTCCTTGCAGTTAGCATTTTTAAAAAGTGAATAGACTCTACACCTGATGTGTAGCTGTTGAAAAGATTAACAAAAGAATTTACATTTAAAAGTCTACATTTTTTTTAAACCAATTTTTATTTAAAAAGTTGGAAAGTTAAATCATGTGACTTTAACGTACCTTCTCATTTATAATTTTATGAAAGTCTGAGACCTTGAGGGTGTTTTGGTCATGTGAAGAGGAGAGTGCCATGCAGTGTAGTTGCCCAGTTTACTTGGGGTAAGGCATTTAGTTCTACTTTTCAGTTATCTAGTTCTACCCTGAATGCCTTGATAACACTCCTAAGGCCCTGGTATGCTTACGCTTTGCTGTTTTTGGCTCAAATTTCTGCCCCTTGGCTTCACAAAGCAGAGATCTCGCTGCAGGGCTTGTGAGCAGAGCCCAGGGACCATCAGTGCCTTTGTTGATGTAAACTGACAGAATAACATTATGTTCTTTTTTAGCTGGAGCTGATAAACTGATGATGAGCTTGAAAATATACAAAGCATTTTCTATAGATGGAATGAACTGAAAGCAGGGAAGAGTATCTTCACTAGGCAGAAGGAGCATGGCTATTTGAAGTGAAAGGTCAATCCATAGCATTGTAATAAACAATCCACAGCATCGTAATAACTACTACTATTGATGTGTATATTCAGAACAATATCACTACATTTTTTTAGTGGAGGGTAATTGCTGCAGTGGTCATTACATTTAATAAATAGCACCAAAAAACAGACATAGCATAGGCAAAAATTCCCTGATATAAATGGCTGCCTAGATTTAATATCATTGTGGATCCGTCCGTGGGAGCCATCCTTTGAGACCAAATGGAGACTCAAACTGGGCAGAATGTTGCTTTCTGCCTGTTGAACTTCCAAACTGCACCTTAAGAGGTTAATGCACCTTAAGTGTGGATGAACCTTATACTTGTTTAGTGTCTTAAAGGAGAAACACAGTTGACATGCAATCTTGTGGTCTTAATGCTATGAAAAGTGCTTTCTTTGCCTTTTTCAATATATTTGCTTGACTTAGCCACTTTGAACAAGGAAAAACAATTAAAACCTGAACTATGATCTTTTGCTGCTTTGTACATTCTGATTGTGCAGTTGAGATGACGGATTTTTAAAAGCCCCTGGGGAGTTTATATGCCTACAGAACATTGTGCCTGTTCTAATATGATAAGCTTTTAAGACACTTTGTTAAAAATTCAATTTTTATAATTGTATAGATATTCAGCTAATTTTGAATGCTGCTGATGGCATACCTAAATTTTTATGTCAAAAATATATTGTGTGTTGTTTTTCCTACCTTGAGATCCTATTTCATACAATGAATATTGTTTTCTTTTTACTAACTCCTTTCAAAGAGAAAGAATTTTACTGTTAAGCAAGCTGTTTTTCCCCCAAATATCACAAAACTTTTTTTTTCTCTAATAAATGAGAGCATTATGATCTTTAATA EMBV3_25615 GAGCAGCAAGTCCGAGAAAGGAACCTGAACCCGAAAGCCGCGTGTCTGAAGAGAAGGGAA Gene GeneID:534935|TCF7L2:NM_001034621:155_cdna Constitutive 0 NULL GeneID:534935 24 GENE TCF7L2 MGC128514 MGC155227 TCF4 transcription factor 7-like 2 (T-cell specific, HMG-box) EMBV3_02682 GGTCCTGTTATACACGGATGCAGGGTCTACAGACACAGAGAGTTGATTGCGTATTTACTG Gene BVT0102_279668 + 0 NULL GK000015.2:5747361-5805478 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058270 TCONS_00058277 TCONS_00058269 TCONS_00058278 TCONS_00058271 TCONS_00058276 TCONS_00058268 TCONS_00058274 1 XLOC_036050 Coding TCONS_00058278 XLOC_036050 NonCoding Coding DCUN1D5 15:5746906-5751200 j TSS43941 4201 4 TCONS_00058278_8 59 0.11759104975006 2 0.0218961099464244 0.00117956884191655 0.00202809722863294 0.00101889039157803 0.000634885186032786 0.000844184302397906 0.000170810931005982 0.000755796813404845 0.000610844971542454 0.00132802854071952 1.88153087077639e-05 5.92396732856728e-05 1.09382665378865e-13 2.31317907717832e-11 0.00014220739267827 0.000100541499605729 0.000425601255332199 7.42589226022728e-10 0.000917391353168331 0.000521520290355382 0.000295466635784327 1.36697117005571e-15 0.000444295192091453 9.85347407434575e-05 0.000197496378180801 9.12126408841291e-116 0.000737147283668401 0.000306615032664749 2.13873317848084e-08 2.97305763075668e-05 4.21588674440631e-08 NM_001046012.1 DCUN1D5 Bos taurus DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) (DCUN1D5), mRNA. 1e-171 609 100.00 0.0799809569150202 NM_032299.3 DCUN1D5 Homo sapiens DCN1, defective in cullin neddylation 1, domain containing 5 (DCUN1D5), mRNA. 0.0 710 82.94 0.166626993572959 0 noncoding 1 1 1 1 0.349936146487568 0.198664227799962 -0.035320632675161 0.533945803743827 GGAAAATACCTAAAGAAGGGAAAGGGCCTGTTCTTCTTGATGAATTTGTTGAGTGGCATAAAGTTCGTCAAGCATCATAGCAAGAAGTATTGTGAAGAAAGTGCAAACCTTTTGATCCTGACGTGTGTACAGGCTAATGAGATGAGAGGGGAAAAAACCTAAGGGGTGCATTTTCATTCATATGAAAGACTTCTCATAGTACTTTTTTTTTTTTTCCTTTTTTTTTAAAAGGACGTTTTCTTGTTACATGTTATGGGCGTTGAGCCACACCTCTTCTGAGACTGAATATTGAAGTTTTTGTTTGAGTTATGTTTATAACATTTATTTCAGAACAATAAAGATTCAGATTTGTGACAAAGGCCTTAAAGTGAAGATGTCCGTTGAGTGTCAAGAGTGGTATTTATTTTTGTAAATTTTAATTCTTGAATTTTAGAAGTCTCTCATACCAGAAATTTGTGGAATTTTAAAGGTTTTAAACAGTCTTAATATTTGGCAATGTACTCTGTTCATGGTATAGCTCATATATTCATCTCTGCACAATCAGAAAGAATATTTATTGGTCTTGACTTCTTGGGTAATTTCTGATGCAGCTAATAAAATACGTTTCTGGATATCGGGCAAGTTTAGCTGTGGTTTTCTGTGAAAGTTGCCAACATATTATGCATATTCTTTATCTGAAAAGTTTACAGTTGGAAAGATTATTGTGTTGTTACTTTGTTTTCTAACCATTAAATAGTATTGTCAATAAGTATAAATCAGCATCGTATGTATACTCTTAATGTGAATTTTACGTTTTCTGTATTCTATCAGTTTAAAATTCCATTATATTAGAGCAAGTTTCATATATTAATGGTCTCAAAATCAGTTAGCCTTATGAGAAAATTAAGACCATTATTGAAGCTGTATATCATCATTATTGTTGTTGTTCGTGACATATATGTGATCTTTTTAACTATCATTTCGTGATTTGGGGAGTTGTGTTGAGGACCACTCCATCCCAATCCCCCTTCTTTTTGGTTATTTGAGAACCTTAGCTCTGATGTTGTGGATTTAGTTAAAATATGTATTAGAAAAACGAGAATACGGACTCATGGGAGAATTCTGGGTGTAATTGTGCACAACTCAAGGATACCATTTACATTGGTACAAATTACATTGCTAATTGTCACAGTTCTCTGACCGTTGGCAGTGAAGTTTCCTGAAGACAGGACCGTCTTTTTTCTAATTCACACAAAAGGTGTCTTTTTGGACTAGCAGCAGGGCTGTTTTTACATTCCTCTTAAACCATCCAATATCCCAGTGAAATGAAAACCGTGTTCACATTTACAGTCAAGTCACAGCTTCAGGAATGTAATTCCTAATTATATGGAGAAAAGCAAATAGGTTGCTTTTCCATAATAACATTTCTATTGGGATTTAAGGTAAAGGTTGGTTTTTGGTGGTGAATTTAATGAGTGATTACAGTAGTGATTACTTAGGGAGAATAGCATTTTAAATAATTTTATGTTTTTGCTTTTTTTTTTTTGCTTTTTGGTTGAGAAAGAATGATTGCCGTTTTTATTTCTTCATGACATCACTATGTACGACTTTGTGAAACACTGATACAATAATGGAAAACAGTTTTTCCCTTAAATGTCTGATAAGGATAATTTTCCTGGAATACTGTGTCAAGTATTAGAATCACTGAATTATCAGAACTGAGCATACTGACAGTGCGTGTTACGACATTATGACTGGTGTTTTAGTATTAAATGTATTATAAGTACAGTCAGTCCTCGAACAACATGGGTTTGAACTGTGTGGTTCTGCTTATAGGCAGATTTGTTTTCAGTAAATACGCAATCAACTCTCTGTGTCTGTAGACCCTGCATCCGTGTATAACAGGACCTGTGGGATAGAGGACCAACTGTGGCTCTTGAGCATCTGCAGATTTTGGTAAACTCGGCGGCTGCTGGAGCCAGTGTCCTTTAGGTCCTGCGGGATGACTGTAAAGCACTTAGGTTTTAGACATTTGAATCTTTATGATATGACTCTTCAGGGAACAACTTGTGAATTTGAAGAATATTGCCCATCTTTATTTAATTCCAAAATATATAATTTAAATGAAATTTTATAAGTTGTCAATTTATGGCCTGAACAAAATTGTTTTGTCTTTATAAGAAACATTTGAAAATTATAGATGCCTTTTAAGGAAATAAAATATATGAAACAATTTACTTTGCTTACTTATCCAAAGATTCCTTTAAGACTTTGAATCTGGAAATTTAAATGAAACTTACTTTATCCTGAAGTCAACAGCCCCATTTTACTCAGGCTGTGCTTGGTTTACTCTGCTCTTTCTAATTCTCCAACCTTCTTAGAGTCATAACTCAACTTATTTTGGAAGCAAACTTAACTCTGCCTCATTCATCTCAGGATATGGGCTTGTCCCTTCTGGTCATTTCTTTTTTAATTAGTATTTGAACATAATTTAATTTATTGGAACTAATGATCAAGAGGTTAAGTAGTGTAAGTAAAGAGGATAGTATTAAGGAGCCAGCAGTATGAATAACAAATCTTCTGTTGGGGCTCTTGTTTTAACTAGTTAGCTTTAAGTGCCTTCCCAGGAATCCTGTTGTAAAACTTCCTTTAATGTGGAATAAAATTCACTGGTGCTTTATAATTAGAAACTACTTTCTTCTTATAGAATAACATACAGATGGAATACTACTGGAAGAAAGTAGAGCCAGGTGTTGATTCTGAACTGTGAGTGGATGGAGAGGTTGTCTCCCAACCCCTTGAAGCCAGTGATTTATTAACAAGGCATAGTATCTTTAGGAACTTGCCAGTTATTCAGGTAACTTATTTGAATAGGAGATAGAAAATGGTGTGTTGTGGGCTTATCTGACTTTATTGCAATGTTATCTCTTATTGTCTTACAATGTCTTCTTTTTTGACTGCTCACAGTAAAATTCTTGACGTAATCCATTTTTGGTTGTAGTAGTATTTTTATGTGTAATGTACAGGTTTTTTGACTTGAGTTTTACTTTGAAGTACTCTAGTGTTTCTTAAAGGGCTCCCTGGTGGCTCAGTGGTAAAGGATCCACCTGCCAAGTAGGAGATGTGGGTTTGATCCCTTGGGTCTAGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCACGGGGTCGCAAAGAGTCAGACATGACTTAGCGACCGACTACACACAAGTATTTCTTAAACTGGAATTTGAGGGCCTTCTATGGGAATGTTAGATTGACCATGAAGAGTACTTCTCTTAAATTCAAATGCCTTTTTCATCTAGTGAGCCAAAAATTTATCTTTAGTAGAATTAATGCCATCACTTTGTGTGGGGAGGTGAGTAGGATAGTAGAATTTTAAAGCATAGTAGTTAATGTAGAGTATTAGCAATGAAACATTTTACTTTGAACAAATGATTTCTTTGTCAAAACATTCCTTTCTCCTTAATTGATGATGTGAAGTTATGAAAGCATTTATTTGAAATATATTACATACTCAGCTTGATAAACAAGAATACTGACTTTTTTTAAAAAACTGCTTTCTTGAAGGGTACTTAAAACTGTTGTGATCATTCCTAATTCAATAAAGTTTTGTTTGGGCTCTCAAGGCTCTTAGGGCCTAAAGTTTTGTAGCACATCTCATGTGCTTACTAAATGTCTAAAGCATCAAATAAGTTGAGGACACTTTAATTTACATAATTTAAATGCATTTCTCTGTTAAACTAAGAGAAAAGGCAAAGCCATCTCTTAATCGTACTTCTAAAGAATTCATAAAGAATTCTCTTTTTCTTGAGATAGTATATTTCTTGAGTGATATTAGGAATCATTACGTGGAAACATTTCAAGGTAGTGTTTATTTACTCTTCAGGAGAAAAGAGAAATAACAGCAAAATATCTTTGATTTTGTCAGGAAAGGCTGGTCTGGATTATTAAATATTCTAGATCATGTAATTTTTTAATGAATATAGTTTTATAAATATTTGTTAACAACCAGACAAGTTGCTTAAGATCTGGTCTTTTTTGTTGATAAACCTAGTTACCTATAAGTAGTAATGTGGAAGCCTAAACAACAGTCTGACTTTTATGGTCAAATTTATATAGATACAGATTATGAAAAGGTAAATTCC EMBV3_30762 CAAGGACTTAACTTCCTGTCCCTCCCCAGCCTTAACCCTGATGCCCACCCTCACGCCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42975 TCATGCTAGCCAGTCGCCCACTCGAGACTAGACAGAGAACCAACAGCCACCTTTCAGTAT Gene BVV0101_019794 + 0 NULL GK000003.2:16052573-16059670 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27030 CGCCATTGACCCCGATACCATCAGTGCTTTGGAACAGTACGCAGCAAAGGTGTCCATTGA Gene GeneID:100337300|LOC100337300:XM_002693103:491_cdna Constitutive 0 NULL GeneID:100337300 15 GENE LOC100337300 NULL zinc finger protein 76 (expressed in testis)-like EMBV3_21398 GTAGCGGTGAGCAAGCCAGAAGTTTCTCCATTTTGTCACCTTTGGTAGCTGTGCAATCGC Gene BVV0102_105679 + 0 NULL GK000026.2:40380690-40916707 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151030 TCONS_00151031 TCONS_00151032 1 XLOC_092007 Coding TCONS_00151030 XLOC_092007 Coding Coding SEC23IP 26:40346153-40386051 j TSS112990 4950 2 TCONS_00151030_5 561 0.015959595959596 19 0.876406747374489 0.000480235823009836 6.94206979559894e-05 0.000220499832160329 0.000495541581334376 0.000218930930978395 4.11459852893992e-05 6.4547448643917e-09 0.000323008926055465 0.000591994106963467 0.000599611666861491 3.66603164935411e-05 0.00021793112821313 7.52837601179654e-06 1.99523581390798e-05 4.32682810019366e-05 2.70527840095071e-06 1.1290373438831e-06 0.00597496816096254 0.000182732583938687 5.79853104947114e-05 3.5248662706749e-05 0.00270332193118358 0.00243028864991996 2.32567095853394e-17 0.000267494686674334 0.000443738525777914 0.000160529093150185 0.000592932521040081 3.42968394950953e-05 0.000692567136157932 XM_005225774.1 SEC23IP PREDICTED: Bos taurus SEC23 interacting protein (SEC23IP), 0.0 8179 99.18 0.924242424242424 NM_007190.3 SEC23IP Homo sapiens SEC23 interacting protein (SEC23IP), transcript 0.0 5048 83.28 0.952929292929293 TCONS_00151030_5 sp|Q9Y6Y8|S23IP_HUMAN S23IP_HUMAN SEC23-interacting protein; 0.0 926 92.15 0.928698752228164 3 coding 0 0 0 0 0.0310826403868557 0.888955468334784 0.0100026666183739 0.828491062802361 CCCTTGGTCTGCTGCTAGCAATATGTTTACCTACACGTGCAGCTTTCGCACTTCCTCAAAATCTTACCTAGTTAAACGCTCCTGTGGGTACTTTATGGAAGCACAGAGCGCCGCCCGCAACCCGAGACTTGCAGTGTCGATTCGTACTTTTATTTACAAACAGCAGCACCCCATCTCCCACGCTCCAGCCCCAGTCTGTCCGGCCCCGCCCGGGCAGTGGCCGACGTTGTCACTTGCTAGGACACGGGCGCGAGGTCGCCGCCGCCATGTTACTTTCTGGCGGCCCCGTTGGAGAAGGCAAAGGGAAGCTGAGCGGCCGCCCGGAGTTCCGGCCCTTGTGCGCAAGTGCGGAAGTGTGTTGGCCCCGACTGCGCTCAGTTTCCGGCCGGTGTTTCCGCACCGGCCGCCCGTAGACGTGTAACGGACGGTGGGCCGCAGCCATGGCCGAGAGGAAACCTAACGGTGGCGGTGGCGCCGTCTCGGCCTCCTCGTCGGGCACTAACTTACTTTTCTCCTCCTCGGCCACGGAGTTCAGCTTCAACGTGCCCTTTATCCCAGTCACCCAAGCCGCCGCTGCCTCGGCCTCCCTGCTCTTGCCCGGAGAGGATTCCACCGATGTGGGTGAGGAGGACAGCTTCCTTGGGCAGACTTCTGCTCACACATCTACCCCACAGACATTTAGTTACTTCTCTCAGGTATCAAGCAGTAGTGATCCTTTTGGGAATATTGGACAGTCCCTGTTAACAACTGCAGCAGCATCAGCTGGACAATCAGCCTACTCCAAGCCCCCAACGTCTCTGCCTTTTACAACTGGATCCCAAGATGTGTCGAATGCATTTTCATCATCCATTTCGAAGGCGCAATATGGTGCTCCACCTGCTTCACAAATCGGAATAAATCCTTACCCGCCTTCTCAGCCTAGTAATCTCCCTCCTTCGAATTTTGGGAGCCCACCACAAGGAACGCCCCAACAAGGATACAATCCGTATCGCCACACGGCTGTAAGCAGCAGGGCTAATCCTTACATTGCACCACCGCAGCTGCAGCAGTGCCAGACACCAGCTCATCCTTCCCATCCTCCGCCCTCCGCACCCCCCGTTCAGATGTACCAGGTGCCTCCAGGATCTTTGCCGCCGATCCCTCCTCCAGCGCAGGCAGGGTTGCCCCCTCCAATCCAGCAGCAGGCACCTGCCAGACCTGCAGGACCCCCTTTGCAAGCGCCACCTCCTTTTCTACTTCAAAACCAGTATGAACCTGTCCAGCCCCACTGGTTTTACTGCAAGGAGATAGAATACAAACAACTATGGATGCCTTTCAGTGTTTTTGACTCTTTGAATCTTGAAGAAATCTATAATTCAGTCCAGCCAGACCCTGAGAGTGTGGTCCTTGGCACTGATGGAGGGCGCTACGACGTCTACCTCTATGACCGGATGCGGAAAGCCGTGTACTGGGAAGAGGAGCCAGCCGAAGTGAGACGCTGTACTTGGTTCTACAAAGGTGACACAGACAGCAGATTTATTCCCTATACAGAGGAGTTCAGTGAAAAGCTAGAGGCTGAATATAAGAAAGCTGTAACCACAAATCAGTGGCACCGAAGATTAGAGTTTCCAAGTGGAGAGACGATTGTTATGCACAATCCAAAGGTTATTGTTCAGTTCCAGCCTTCCTCAGTGCCTGATGAATGGGGGACCACGCAAGATGGACAGACAAGGCCTAGGGTTGTAAAGCGCGGAATTGATGATAACCTGGATGAAATTCCTGATGGAGAAATGCCTCAGGTTGACCATTTGGTGTTCATGGTACATGGCATTGGACCTGTGTGTGACTTGCGCTTTAGAAGCATTATTGAATGTGACACACTTCAAGAAATCTTTAGATGATCGGAAAGTAAGCAGAGTGGAGTTCCTTCCAGTTCACTGGCACAGTTCCTTGGGTGGAGATGCCACAGGTGTTGACAGGAATATTAAGAAAATCACTTTACCGAGTATTGGTCGGTTTCGTCACTTTACCAACGAGACCTTGCTAGACATTTTATTTTACAACAGCCCCACCTACTGTCAGATGATTGTGGAGAAAGTGGGGTTGGAGATAAACCGTCTGTATGCACTCTTCATGAGTCGGAACCCAGACTTCAAAGGCGGGGTCTCCGTTGCTGGTCACAGCTTAGGCTCTTTAATATTGTTTGACATCCTGTCTAATCAAAAAGATTTGAGCTTATCAAAGTCTCCTGTGCCTTTTGCTGTTGCTAATGGAGTTGTGAAGCAACCACATTTTCAGGAAAAGCAGATACCCGAAGAGCCAAAGCTGACGTTGGATGAGTCTTGTGACCTTGATGTTGAAAATGAAGAAGTCCTGACTTTGCAAGAAACTCTGGAAGCACTTAGTCTCTCTGAATATGTTAGCACTTTTGAAAAGGAAAAGATTGATATGGAATCTCTGCTTATGTGTACAGTGGATGATCTGAAGGAAATGGGGATACCACTTGGACCCAGAAAGAAGATAGCTAACTTTGTAAAACATAAAGCTGTCAAACTGGAAGAGAAAAAAGCAGCATCGGAAAAGAAGGCAGCGGTGGCCACTTCAGCAAAAGGACAGGAGGAAAGTGCTCAGAAAGCTAAAGACATGGCTTCTCCTCCCTCAGACTCGAACGAGTCCAAGAGGAGACTCCCGCTTGGAGCGTCCGTCTCTTCTGTGCGTGTTGATTATGAGGCCTTTGAAGTTGGCACCGGACAGGTTTCTGTTGTTTACAGCTCCTTAGACTTTGAACCAGAGATTTTCTTTGCCTTGGGATCTCCAATTGGTATGTTTCTCACTATTCGAGGAGTGGATAGGATAGATGAAAACTACAGGCTTCCTACCTGCAAAGGATTCTTCAATATTTATCACCCACTTGATCCAGTGGCGTATCGATTAGAACCTATGATTATACCAGATTTGGACCTGAAGGCAGTTCTCATTCCACATCACAAAGGCAGAAAAAGACTGCATTTAGAGTTGAAAGAAAGTCTGTCTCGTATGGGATCTGATTTGAAGCAGGGTTTCATTAGCTCTCTGAAAAGTGCTTGGCAGACATTAAACGAATTTGCCCGTGCTCATACCTCTTCAACTCAGTTGCAAGAAGAATTGGAGAAGGTAGCCAATCAGATCAAAGAAGAAGAAGAAAAGCAAGTAGTTGAAGCAGAAAAGATTGTTGAAAGTCCAGATTTTTCCAAGGATGAGGACTACTTAGGAAAGGTTGGAATGTTGAATGGAGGCCGTCGAATTGACTACGTTCTTCAAGAAAAGCCAATAGAGAGTTTTAATGAATATCTTTTCGCTCTTCAGAGTCACTTATGCTATTGGGAATCAGAAGATACTGCTCTGTTATTACTTAAAGAAATTTATCGAACAATGAACATTAGTCCAGAACAGCCCCAGCATTGATTGGACTTCAGCTTAACTGTACTCTTGTCTTTGCAGAAGCTTGCAGTCTAAATTACAGTGCTGAGAAAATCCTCGGAGGACATTCCCAGTCCGCTCTTGGGATGGCTGACAGAAAAGTGATTCATTGACAGTTCCTGTGCTGTCATTCTCAGATGTAGGGGTTCATTTTAAAGAAAATATGCAGGACAAAAAGACAGTGCAAAAAATCAGTACCACATTTGGACTGTGTAGGTGAGAAAAAGAAATGTTTAAAATGACGCAGTTTAAAACTCCTCAGATCAGTTTAATTGTACAGTTGTCAAAGTAATATGTGATATCAATGAAGAATATTTGTTGCATGCAAACGGTTGTTTCTTTTTCCTAAAAAACTACTGTCATTGGTCTATTAAACGTGCATTTTAAAATTAATGTAGTATGTTCTACAGACTTCTCAAGAAACTATAATAATACAGTTTTTTAAAAATTTATGTTCAACTTTTTAAATGTGAATTATAGTTTGGGCTGCTTCAATGCAGGGTTATTTGTATTTGTTAAGCAGAAGTAACCAAAATCACTTCTGTTCCAAGCTCCGCTGTGGTCTTGGAGCCTTCCAGGCTGTTGCTGGGAGGAGAGTGGTGAGAGGAAGTGAGACGCTCTGCACTCACGGAAGTCCTGTGAACGCTCTCCCGGTGTCGCTTCCGCTAGTAGCGGTGAGCAAGCCAGAAGTTTCTCCATTTTGTCACCTTTGGTAGCTGTGCAATCGCCTTATTGCTGAAGTTGCAGTTAATATGAGAACCACAGTAGAATTTTTCTGGGTTTGGGTTTTTTTGCCTTGTATTAATTTCACTTATACCAAAGTATTGGGAAGTATGAACTTCTAGACTGTAGCTGTACTTCATGAAAAGACTGTTCTGTGATATTTTACTTTGTTTTACTGTAGCTTCAGATTATCTGAATATTTTCCTAATAGTCTGTGGGAATGCTGATCTGCTTTTGTTACGCAGTAGGAACGTTTGACACTGTTTACATAGTTCTCATGGAACGTAGAATTTTTGGAAAGCCACATATGATACACATTTTTTGTGTATATATATTAGTGTGAATAAAACAGTAACATCAGTGCATTTTTCTAAAGCAGAAAACTTCTGTAATTTTCTTGTCTTCCTTAAAAGTATTCCTTTGAGTTCAGTGTTCATTTACTTTTCATTGTGAGCATCTGCTCTATGGTTAATGTCTAACTATAGCATTTGCTCCTAATAATAGAATTAGGACAGTAGAGTTTTTGAACTGCAGCTGACCCCAGACGGCATATGTTCCAACCACCTTATTCTGCATCCAAGGACACGACACTAAATGCCTTTCTCAGGCTGCTGGTGGCAGATCTGGGCTGGAGTATGGTTCCACCCACTCCCTTTTGGCCTTCATTTCTCGACACCAGTGCTATTACTTTTCACTTAATTTCCTCCTAACTTCCCCAACTGATGAAATAAAAATAAGAGTTATTTATGTATATTTTAATAAAATCCTGTTCGATTTTTCAACTTACAG EMBV3_39150 TGGAAATTCTGCATCTTTATCCAGAGCTCCAGAGACGACCTTGTCAGCCTGGGTCCCCCT Gene GeneID:533351|C13H20orf4:NM_001034587:1189_cdna Constitutive 0 NULL GeneID:533351 13 GENE C13H20orf4 C20orf4 MGC143142 chromosome 20 open reading frame 4 ortholog EMBV3_08660 GAACATACTGAGCTGTGGATTCATTGGCTCCTATTCGGTGGTCTTGGCCGTGGACAGTTA Gene GeneID:510190|TM7SF3:NM_001076827:5_cdna UTR3_Alt 2 NULL GeneID:510190 5 GENE TM7SF3 MGC140686 transmembrane 7 superfamily member 3 EMBV3_23101 TCTGCAAACCCTTGTTATATGGCAGCAAAATGTCCCGAGGTGTCTGCCTCTCTCTCGTTG Gene GeneID:618091|LOC618091:XM_002693751:517_cdna Constitutive 0 NULL GeneID:618091 15 GENE LOC618091 NULL similar to olfactory receptor 1025 EMBV3_06173 GAGCGCGTCCTCAAGCGCAGGAAGGTAAAGCGGTCCAGCTCCTTGAAAAAGAAGTTCAAA Gene GeneID:526046|SURF2:XM_002691621:288_cdna Constitutive 0 NULL GeneID:526046 11 GENE SURF2 NULL surfeit 2 EMBV3_27043 CCAGGGGAAGGGGCTGTTTCCCCCAACGCGGTCTCTGCAGTGCTGAGCACCCCGATGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17225 AACCAGTATATGTTTCAAAAGTACATTATGCTGGACAGCACGAAGTTGTAGCTATAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26481 GAGGGCTACCCCATTTCTTCAAAGGGATTCTTGCCCACAGTAGTAGATATAATGGTCAAC Gene BVT0102_219973 + 0 NULL GK000021.2:7012113-7045097 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081660 TCONS_00250009 TCONS_00039767 TCONS_00018840 TCONS_00124861 TCONS_00032660 TCONS_00164548 TCONS_00238908 TCONS_00048441 TCONS_00091156 TCONS_00162732 TCONS_00178519 TCONS_00188338 TCONS_00197218 TCONS_00201371 TCONS_00242450 TCONS_00241364 TCONS_00169650 TCONS_00110346 TCONS_00169662 TCONS_00186843 TCONS_00153295 TCONS_00199216 TCONS_00169657 TCONS_00066154 TCONS_00122398 TCONS_00242579 TCONS_00107252 TCONS_00110687 TCONS_00207716 TCONS_00057663 TCONS_00009218 TCONS_00190425 TCONS_00239537 TCONS_00012559 TCONS_00148961 TCONS_00010409 TCONS_00091999 TCONS_00197561 TCONS_00131899 TCONS_00049056 TCONS_00009520 TCONS_00233199 TCONS_00150016 TCONS_00232046 TCONS_00011662 TCONS_00031121 TCONS_00164545 TCONS_00071294 TCONS_00253124 TCONS_00250193 TCONS_00186768 TCONS_00031446 TCONS_00163173 TCONS_00239426 TCONS_00122302 TCONS_00135594 TCONS_00117322 TCONS_00250884 TCONS_00087974 TCONS_00012560 57 XLOC_050539 XLOC_152952 XLOC_023584 XLOC_009522 XLOC_076404 XLOC_018900 XLOC_100256 XLOC_145574 XLOC_028573 XLOC_055932 XLOC_099613 XLOC_108292 XLOC_114381 XLOC_118880 XLOC_123017 XLOC_149114 XLOC_148028 XLOC_103412 XLOC_066250 XLOC_112894 XLOC_093059 XLOC_120869 XLOC_040871 XLOC_073953 XLOC_149242 XLOC_063163 XLOC_066589 XLOC_126231 XLOC_035461 XLOC_004774 XLOC_116460 XLOC_146203 XLOC_007887 XLOC_090839 XLOC_005960 XLOC_056767 XLOC_119222 XLOC_080604 XLOC_029187 XLOC_005075 XLOC_142681 XLOC_091796 XLOC_141533 XLOC_007213 XLOC_017370 XLOC_043065 XLOC_156065 XLOC_153136 XLOC_112820 XLOC_017694 XLOC_099814 XLOC_146092 XLOC_073857 XLOC_081817 XLOC_071488 XLOC_153827 XLOC_052762 Coding TCONS_00122398 XLOC_073953 Coding Coding - 21:7014236-7017701 - TSS91157 3465 2 TCONS_00122398_6 162 0.999134199134199 1 0 0.000585063789679719 0.00133028532566571 0.000609788916453181 0.000624308497602406 0.00073401160528929 0.000200252401671131 0.000626425269143257 0.000349032436503999 0.00159392940138531 7.83712933799993e-05 3.93092567665752e-05 1.24693152206138e-06 0.000143947124633393 0.000278438333232553 0.000169534072105345 4.57343504794127e-05 0 0 0.000637588180278657 0.000974569220305688 0.000302463247050511 5.35402974725164e-06 0 4.83829113148253e-06 0.000540658716267424 0.000418807931195365 0.00054565641174357 1.38603259552188e-05 4.20312405404202e-06 2.31351667898023e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1353 84.88 0.333621933621934 NR_047679.1 UGDH-AS1 Homo sapiens UGDH antisense RNA 1 (UGDH-AS1), non-coding RNA. 3e-58 232 68.22 0.192784992784993 TCONS_00122398_6 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-06 47.8 22.86 0.777777777777778 1 coding 0 0 0 0 -0.771351067419945 0.0405011737901622 0.0376261617141226 0.472326582819497 NNATTTTTTCATTTGTAATTTTTTTGATTTGGGTCCTTTCTTTTTTCCTTGGTTAGTCTAGCCAAAGATTTGTCTAATTTTGTTTATCTTTTCGAAGATCCAGTTTTTAGTTTCTTATCTTTTTAGTCTCTATTTCATTTTATCTCCTCTAATCTTTCTTTCCTTTCTTCAACTAACTTTGAACTTAATTTATTCTTCTTTCTGTAGTTCTTTGAGGTGTAAAGTTAGGTGGTTTATTTGAATTATTTCTTAATGTAGGTGTCTATTGCTGTGTGTTTTCCTCTTAGATCTGCTTTCTCTGCAACACATACATTTTGATACGTTGTGTTTTCATTTTGGTTTGTGTCAAGAAACTTATCTGTCTCTCTTTAAAAAGATCATATACCATGATCAAGTCAGATTTGTTCCAGGAATGCAATAATTCTTCCATATATGCAAATCAATCAATGTGATACACCATGTTAACAAATTTAAAGCTAACCATATGATAATCTCAATAGATGCAGAAAAAGCTTTTGACACAATTCAACCCCATTTATGATTAAAAAAAACTCCTTAAAAAATGGGTACAGAAGGAACCTACCTTAACATAATAAAGGTCATATACAACAAACACAGCAAACCTTATTCTAAATAGTGAAAACCTGAAAGCATTCCCTCTGAAATCAGGAACAAGACAAGGGTGCCCACTCTCACCATTATTACTCAACATAATTTTGGGAATCCTAACTATGGCAGTCTGAGAAGAAAAAGAATAAATGGAATCCAGATTGGAAAGAAAGAAGTAAAACTCTCACTATTTGCAGATGACAGATTCAAATAGATGACTGTTTACAGATACTGTACATAGAAAACCCTAAAGATACTGTCAGAAAATTATAGAGCTAATCGGTGAATTTAGTAGCATTGCAGGATACAAAATCAATACACAGAAATCACTTGCATTCCTATACACTAAAAATGAAAAATCAGAGAAATTAAGGAATCAATCCTACTTACTATTGCAACAAAAAGAATAGAATATCTAGGAATAAACTTATCTAAGGAGACATGTAAAGATGCTGTAAAGAACAATATCGCATAGGAACCTGGAATGTTAGGTCCATCAATCAAGGTAAATTGGAAGTGGTCAAACAGGAGATGGCAAACGTGAAAATGGACATTTTAGGAATCAGTGAATTAAAATGGACTGGAATGGGCAAATTAACTCAGTTGACCATTATATCTACTACTGTGGGCAAGAATCCCTTTGAAGAAATGGGGTAGCCCTCATAGTCAAAAAGAGTCTGAAATGCAGTTCTTGTTTGCAATCTCAAAAACGACAGGATGATCTCTGTTCATTTCCAAGGCAAACCATTCAATATCATAGTAATCCAAGTCTATGCCCAAGCAGTAATGCTGAAGAGCAAGTTGAACAGTTTTATGAAGACATGCAAAACCTAGGACTAACACCCTAAAACGATGTCCTTTTCATCATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAGATACTGGAGTAACAGGCAAATTTGGCCTTGGAATACAAAATGAAGCAGGGCAAAGAGTTTTGCCAAGCAAATGCACTGGTCATAGTAAACACCCTCTTCCAACAACACCAGAGACGACTCTACACATGGACATCACCAGATGGTCAATACTGAAATCAGATTGATTATATTCTTCACAGCCAAAGATGGAGAAGCTCTGTACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGTCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTTAAATTGAAGAAGTAGGGAAAACCACTAGTCCATTCAGGTATGACCTATATCAATCCCTTATGGTTATACAGTGGAAGTGACAAATAGATAAGGGATTAGATCTGATAGACAGAGCACCTGAAGAACTATGGACAGAGGTTCGTGACATTGTACAGGAGGCAGGGATCAAGACCATCCTCAAGAAGAAGAACTGCAAAAAGGCAAAATGGTTATCTGAGGAGGCCTTACAAATAGCTGAGAAAAGAAGAGAAGTGAAAGGCAAAGGAGAAAAGGAAAGATATACCCATTTGAATGAAGAGTTCCAAAGAATAGCAAGGAGAAATCAGAAAGCCTTCCTCAGTGATCAATGCAAGGAAATGGAAACAATAGAATGGGAAAGACTAGAGATCTTTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGCAAAGATGGGCACAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACAAAGAAGAACTATACAAAAAAGATCTTCATGACCCAGATAATCACGATGGTGTGATCAGTCACCTAGAGCCAGACACCCTGGAGTCTGAAGTCAAGTGGACCTTAGGAAGCACCACCACAAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTTCAAACCCTAAAAGATGATGCTGTTAAAGTGCTGCACTCAATATGCCAGCATATCTGGAAAACTCAGCAGTGGCCACAGGACCAGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAGGTTCAAACTACCACACAGTTGCACTCATCTCATATGCTAGCAAAGTAATGCGCAAAATTCTCCAAGTCAGTCTTCAACAGTATGTAAACTGTGAACTTCCAGATGTTCAAGCTGGATTTAGAATAGGCAGAGAAACCAGAAATAAAATTGCCAACATCTGTTGGGTCATTGAAACAGCAAGAGCATTCCAGAAAAATACCTGTTTCTGCTTTATTAACTACGCCAAAGCCTTTGACTGTGTAGATCACAACAAACTGGAAAATTCTGTAAGAGATGGTAACCAGATCACCTGACCTGCCTCCTGAGAAACCTATATGCGGGTTAGGAAGCAACAGTTAGAACTGGGCATAGAACAACAGACTGGTTCCAAATCGGGAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATGCAAAATGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAACCTCAGATACACAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAGAGTCTCGAGGATAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAACATTCAGAAAACTAAGATGGCATCTTGTCCCATCACTTCATGGCAAATAGATGGGGAAACAATGTAAACAGTGACAGACTTTATTTGGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGTCTGCTCTTTGGAAGAAAAGCTATGACCAACCTAGACAGCATGTTAAAAAACAGAGACGTTACTTTGCTGACCAAAGTCCATCTAGTCAAAGCTATGGTTTTACCAGTAGTCATGTATGAATGTGAGAGTTGGACTATAAAGAAAGCTGAGCACCAAAGAAT TCONS_00120438 . 5' 2125 TCONS_00120438 . 5' 2125 EMBV3_13164 TCCAGCCCGGATCCATTCCTTGCCCTGGGGGAGACCCCGAACATTCTCTCTGGATGCTGT Gene GeneID:539691|RTKN:NM_001034681:51_cdna Constitutive 0 NULL GeneID:539691 11 GENE RTKN MGC127441 rhotekin EMBV3_41625 CACCTGGGAGGGTGGCATGATGGTTCCTTGGAGACCCTGTCTGTTCCCATTTGATTACTT Gene BVT0102_314230 + 0 NULL GK000009.2:95289979-95353541 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242759 1 XLOC_149422 NonCoding TCONS_00242759 XLOC_149422 NonCoding NonCoding - 9:95319439-95321534 - TSS182437 2095 3 TCONS_00242759_5 96 0.288782816229117 1 0 2.59774413754929e-05 7.19457581848449e-05 0.000295952087233383 3.1710423074588e-05 0.000162608870034113 0.000836637458273003 3.34035927055492e-05 0 0.000177010008026627 0 0 0 2.19133717267073e-05 0 0 9.69766472561208e-07 0 0 2.39601146489695e-05 0.000710562383269336 8.9840184657753e-05 2.7246742449734e-07 0 0 0.000297642789260039 0.000638968632075359 1.1186915138322e-05 0 0 0 XR_232166.1 LOC101902393 PREDICTED: Bos taurus uncharacterized LOC101902393 (LOC101902393), 0.0 1682 100.00 0.444391408114558 0 noncoding 0 0 0 0 -0.0655337362310101 0.696215874172371 -0.0153425936405109 0.738442955567603 CCTCTTTGATGTTGTTTAGTCGGTAAGTTGTGTCTGACCCTTTGTGACCCGATGGACTGTAGCCCACCAAACTCCTCTGTCCATGGGGATTCTCCAGGCAAGAAGACTGGAGTGGGTTGCCATTTTCCGCTCCTGCGGATCTTCCTGACCCAGGGATCGTACCCTCGTCTCCTGCATTGGCAGGCGGATTCTTTGCCAGTTGAGCCACCTGGGAAGCCCATGAGGTCCTCTAGTAGGTGCCTTACCCACAAGATAGTCCAGAAGTAGCACTCTGAGGCCAAAACACTTTGATCACAGATGCAGCAAACCAGCACAAGTTATGAAGGCATAGGTGAAAACATAACACGTATGACCCTCACCCCGGCGCACGTAGCCAACAACCAAGTACATCAGGGACGCGTGCCAAGATTTACAGGACAGCTGGGGGGCGTCCGCACCTGCTCTAGGCCTGACGAAGCTGGGAGCCGCATCTTCTCCCTGCAGATCTGGGGATCAGCTGGACGCTTCTGCTCTGGTGTGCACGCCTGGCCCAGGCTCAAGGGGTGCCAGCTACTCCAGTTAAGCGTTTTCTCACAGTGATGGCAAAAGCACAAGTAATCAAATGGGAACAGACAGGGTCTCCAAGGAACCATCATGCCACCCTCCCAGGTGCCAGTAACTGAAGCGAGTCACACGGGCCAGCCAGAGCCAGAGAGGCAGGCACACCTCGCTCACTGTGACGTCACTGAGGACACACGGTGGTTGTGACACGCTGAGTGTGTTAATGATGCTTGACATGCCCTCCCGTTCCTTCCCAGCTGGTGCTAGGGATAAACCCGCCTGCCAGTGCAGGAGATGGAAGAGACGCGGGTTCCATCCCTGGGTTCAGAAGATCCCCTGGAGAAGGACATGGCAACCCACTCCAGTATTCCTCCTGGAGAATCCTGTGGACAGACGCGCCTGGTGGGCTGCAGTCTGTGAGGTTGCAAAGAATTGGACAGGACTGAAGCCACCTGACAGGGCACACCCTCTCCCTCCACGTGGTGGGGGCCCCCAAGCCCCCCTCCTCTGCTAAGACACCAGGTCAGGGTGAGGGCTGAGGGTGGGCAGGGAGGCAGGCACGTGGAGAGGCCCTCGTCCAAGAACCCGTCTACTAAGGGCTCAATTTCTGTTTCCGTCAACTGCCAGCTCCGTGATCTCCGGCAAGCCACTTAACCTCTCCCAGCTTCAGTGCCAAGTACGTAAAATCAGGAATAATAACCGTTCTGGAGAAGAGGATGCCCTGGCCTTCTCGGATGCGTGGATGTGTGAGCCCTGGCCTAACACAGGGCAGGGGCTCAGGAAATGGCCGTCTCTTCACACTCCGGCTCTCCTGAGCGGTGGCAGGGACTGGGGTGGGCGAGTAAACAGCTCTGAGTCTTCCTAAGAGCTGGTCTCTATAGAAGGTCAAGCAAAAGGCTTGTCAACCCGTCTACTAAGGGCTCAATTTCTGTTTCCGTCAACTGCCAGCTCCGTGATCTCCGGCAAGCCACTTAACCTCTCCCAGCTTCAGTGCCAAGTACGTAAAATCAGGAATAATAACCGTTCTGGAGAAGAGGATGCCCTGGCCTTCTCGGATGCGTGGATGTGTGAGCCCTGGCCTAACACAGGGCAGGGGCTCAGGAAATGGCCGTCTCTTCACACTCCGGCTCTCCTGAGCGGTGGCAGGGACTGGGGTGGGCGAGTAAACAGCTCTGAGTCTTCCTAAGAGCTGGTCTCTATAGAAGGTCAAGCAAAAGGCTTGTCAGTGAGGAGGGGCGGGAAATGCCCAGGTGAGAAGAAGCAAAACCCAAACAGGACTTGACTCCTGGAAAAGGCACAGGTGTTTGGCATTCATGTGGGGAATCCGGCCCCTTCCAGAAGAGCCAAACAGAAACTGGAGGAGACGATGGGCTGGGGTGTTACTTCACACCGGCTGTTTGAAGGTGGTGGTGGGGGGCACCAGGTTTGTCCCGTCGGGGCTCTGCTCTCCTTAGTTGCAACGTCCAGTCACAGTCTCTGGAGATGGGGGGCTCTCTCCCAGGGTCCCTGCATTAGGAGCCAGGAAACCCGCCCAGGCTGGGTCACGTGCCCACTC TCONS_00236331 TCONS_00236332 . 3' 29462 TCONS_00236331 TCONS_00236332 . 3' 31556 EMBV3_23831 TATGCGTTAGTCGCTTAGTCGTGTCGGACTCTTTGTGACCTCGTGGACTGTGTAGCCTGG Gene BVT0102_020898 + 0 NULL GK000005.2:57219970-57241072 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42582 GCCCACTTTTGTCTCCGCGGTTGATGGACTCACCTTCCAGGCCTTTTCCTACTTAAACGT Gene GeneID:282490|BOLA-DMA:NM_001012674:50_cdna Constitutive 0 NULL GeneID:282490 23 GENE BOLA-DMA DMA major histocompatibility complex, class II, DM alpha-chain, expressed EMBV3_31893 ATGGGGGTGGGGAGCTGGCAGTTTGGAGAGAGAGGATTTGGGGATTCTGCAGTGTGGAAT Gene GeneID:515756|EPHB4:XM_002698204:761_cdna Constitutive 0 NULL GeneID:515756 25 GENE EPHB4 NULL EPH receptor B4 EMBV3_33946 CTTTGAGGATGTTCAATAGCATTAACAGTGGCTTTGTTTTGGTCTGGGGCAGATGCCACC Gene GeneID:531706|USP33:NM_001101139:56_cdna Constitutive 1 NULL GeneID:531706 3 GENE USP33 NULL ubiquitin specific peptidase 33 EMBV3_17618 CTGGCCTATCGACAAACCCTGAGAACCCAGGCCACTTTGACAAAATACTGCACACAGCTT Gene GeneID:520046|DHX38:NM_001075798:276_cdna Constitutive 0 NULL GeneID:520046 18 GENE DHX38 MGC137958 DEAH (Asp-Glu-Ala-His) box polypeptide 38 EMBV3_11190 TGTCTCCTGTGGACCTGTTGGTTTCACCCAGAATCCAGTTCTCTTCTGAATGTGCAGCTG Gene GeneID:783730|LOC783730:XM_002699561:61_cdna Constitutive 0 NULL GeneID:783730 X GENE LOC783730 NULL similar to family with sequence similarity 127, member A EMBV3_10169 AAAGCTTCTACAATATGAAAATGGTGCCGTGTCCCTTCCCACTGTTCCCAGTCTCAGCCG Gene GeneID:514590|PLCH2:XM_002694123:468_cdna Constitutive 0 NULL GeneID:514590 16 GENE PLCH2 NULL phospholipase C, eta 2 EMBV3_10473 CCCAGAGAAAAGTTGTTGTCAGTCATAGCACACATCGGACATTTGGAAAACAGCAGTGGC Gene GeneID:515543|EIF3M:NM_001035312:32_cdna Constitutive 0 NULL GeneID:515543 15 GENE EIF3M HFL-B5 MGC127047 eukaryotic translation initiation factor 3, subunit M EMBV3_28758 TGTCACGACGGGGCAGCCTCTTTCCCAAGTCGAGTTCGTTGGGTAAACTATTAAGACAGC Gene BVV0102_034428 + 0 NULL GK000011.2:106152398-106157002 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029449 TCONS_00029450 TCONS_00029447 1 XLOC_015752 Coding TCONS_00029450 XLOC_015752 Coding Coding UAP1L1 11:106155865-106161939 = TSS20476 2791 1 TCONS_00029450_1 504 9 0.541906800592788 1.34291451404908e-10 7.197823678969e-06 9.5847539720912e-11 1.18990540631718e-05 0 6.85865303742486e-06 0 0 7.01573382552452e-11 2.9472979222034e-06 6.67575242680646e-06 3.72541884904172e-11 4.11137048764354e-06 0 6.99407862105236e-13 0.00251718780096857 0.000506718762767611 0.00265770942311396 0 1.31263174800214e-64 0 1.44488795964773e-06 0.000148312758882931 0.000331496894126608 3.21952383049574e-05 6.72989842546153e-11 2.51900464625675e-05 1.72045847533476e-05 3.5830098411335e-05 3.32238004666075e-05 XM_003585073.2 UAP1L1 PREDICTED: Bos taurus UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 (UAP1L1), mRNA. 0.0 5034 100.00 0.999641705481906 NM_207309.2 UAP1L1 Homo sapiens UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 (UAP1L1), mRNA. 0.0 1741 85.36 0.545324256538875 TCONS_00029450_1 sp|Q3KQV9|UAP1L_HUMAN UAP1L_HUMAN UDP-N-acetylhexosamine pyrophosphorylase-like protein 1; 0.0 832 84.03 0.992063492063492 1 coding 0 0 0 0 0.0626711782946087 0.557078269816133 0.0215789629450778 0.663604314049751 GGGCCCGCCCGGCTGGAGTCTGGACCGCCTGCGGGTCCCGTGACACCGGCCGGAGAGCGCGGGTCACAAGCGCCAGCGCGGCCGGCGGCGGCAACATGGCCTCGGAGGCGGACCTGCGCGCCCGGCTGCAGCGCGCCAGCCAGGAGCACCTCCTGCGCTTCTGCGCCGAGCTGGCGCCGGAGCCCCGCGCCGCGCTGCTGGCCCAACTCGAGGCCCTGGAGCCCGAGGCGCTGCGCCAGCACTGCCAGCGCGCGGCTGCTGCCTGCGCGCGCCGCCCGGGCCCGCCGCCCGACCTGGCTGCGCGCCTGCAGCCCCTGCCTCTTGAGCGCGTGGGCAGCGCGAGCGAGGGTGACCCCCAGACCCGGCGGCTCTGGGAGGAGGAAGGTTTCCATCAGATCGCCCTGAACAAGGTGGCCGTGCTCCTGCTGGCTGGCGGGCAGGGCACCCGCCTGGGCGTGACCTACCCCAAGGGCATGTATCAAGTGGGGCTGCCCAGCCAGAAGACCCTGTACCAACTGCAGGCAGAACGGATTCGGCGGGTGGAGCAGTTGGCCGGCGAGCGCTACGGGACCCGCTGCACTGTGCCCTGGTACATCATGACCAGTGAGTTCACGCTGGAGCCCACAGCCAAGTTCTTCAAGGAGCATGACTTTTTCCACTTGGATCCCAACAACGTGATCATGTTTGAACAGCGCATGCTGCCTGCTGTGTCCTTCGATGGCAGGGCCATCCTGGAGAGGAAAGACAAGGTCGCCATGGCACCAGATGGCAATGGGGGCCTGTACAGCGCGCTGGAGGACCACCAGATCCTAGAGGACATGGAGCGGCGAGGAGTGGAGTTCGTGCACGTGTACTGTGTGGACAACATCCTGGTGCGGCTGGCCGACCCGCTCTTCATAGGCTTCTGCGTGCTGCGGGGCGCCGACTGTGGAGCCAAGGTGGTGGAGAAGGCGTACCCTGAGGAGCCAGTGGGCGTGGTGTGCCAGGTGGACGGCGTCCCCCAGGTGGTGGAGTACAGCGAGATCAGCCCCGAGGTGGCGCAGCTGCGCGCGCCAGGTGGGGGCCTGCTGTACAACGCAGGCAACATCTGCAACCACTTCTTCACCCGAGACTTCCTCCGGACGGTCACCAGGGAGCTCGAGCCCCTGCTGCAGCCACACGTGGCTGTGAAGAAGGTCCCCTGTGTGGATGAGCACGGGAACCCAGTAAAGCCGCTGCAGCCGAACGGGATCAAGATGGAGAAGTTCGTGTTTGACGTGCTCCCGTTTGCCAAGAACTTCATGGCCTTCCAAGTGCTGCGGGAGGAGGAGTTCTCCCCACTCAAGAACGCTGACTCAGCCGACAGGGACAACCCCTCCACGTCCCGGCGGGCCCTGCTTGCCCAGCACTGCCGGTGGGCCCTGCGGGCAGGCGCCCGCTTCCTGGACGTGCACGGGGCCCAGCTCCCCGAGCAGCTCAGCCTGCCTGGCAGCGCAGAGCCTCCAGCCATCTGTGAGATCTCCCCCTTGGTGTCATACGCTGGAGAGGGGCTGGAGAAGTACCTGCGAGGCCGCGAGTTCCGGCCCCCACTCATCCTGGACGAGGCCATGGCCAGGGAGCTGCGGCCCTGACCCCTGCCAACCCTGGGGCCCAAGACTCAGGACGCAGCCCCACCTGGGCTCCAGGCAGGGGAGCTGCTCTGCGATTCTGGCTGCAGACCGGAGACCACAGAACGGAGCAGGCTTCCTCCACAAGGGTGGGAGGCCTCCCGCCACCAGGGCCCTGGGAGCCGGGTGACCCCGGGCCTGCAGGGTCCCTGGGGGCGCTCTGGCTTCACTCCTGCAGTGGCGTCCAGGCTGGAGGCAGAGGGACTCGGAGGACTGGGGTGGGGCCCAGGCCGGTGCGGCAGGTGCTGACAGGCGCACGGGCCTGTCTGAGCTGAAAGGGCTCCTGTGCGCCTGCAGACCCACCTGGCGGGAGCAGGAGCAGCCATGCTGCGCTTTTCCGCAGCGACGTCAGAGCCTGCAGGGCTCTGTGTTGGGAGGGACAGCTGAGCCTGGGGGTCACAGCCAGGCGCCCCTTCCCTGCCCGGCTGCGGCCCACAGCAGGTCCGGAGCTGGCTCTCCGGGAAGCTTGGCCTGCACGCCTGGCACAGTTGTCTCGAGTTCCATCCAAAGCTTCAGCCCCCAGAAAACAGTGGGACCCGTGGAGGGCGCCGCCCTCCCGCCCCCGCCCCCAGCCTACAGGGAGCTTCTGACAACACGGTGCCCGCACTCCTTACCGCCCCACCCAGGGAGGGGTGGGCACAGACCCTCACTGCACACCCTCAGCCTGGTCAAGGTGGGGAGAAGCCGGCTGCCTCTGGTCTCTCTCCACGGGCTTGGCTGCTTGGGGCCGCTTCCCGCCTGGAGAACAGCACAGGGCGCCTGCCCCCTCCTCCTGTGAACAGCCTCCTAAGTGCCGCCCGCCCCGCCCCTCCCCGCTCCTCCAGCCCACGTGCGGCCGTCTCCCCCAGGAAGGGTGCTGTCCCGGGGGCTTCAGTGGCAGTGAGCCTCCCGCCTCGGGTGTGCCAGCAGGGTCAGGGCCAGGCCCAGGGCTGTGCCTCCACCCAGGCTCTAACCTGTGCCTTACTTGCCTTCTCCCAGCTGCTCCACAGGCCAGCAGAGGGCCTGGGGCAGATGAGGGTCACCAAGGAGGAGGCCGAGGTTGAGGGTCCCGCCCGGCCCAGGGGCTCCTCACTGCCACGACGGGGCAGCCTCTTTCCCAAGTCGAGTTCGTTGGGTAAACTATTAAAACAGCTTGCTTTCACAAA EMBV3_36111 AGGAGGATAGCCTGGAAAGGTTTCTCTACGAATCCTCATCAAGGACTTTGGGAGCACTTT Gene GeneID:516644|NCAPG2:XM_002687059:184_cdna Constitutive 0 NULL GeneID:516644 4 GENE NCAPG2 LUZP5 non-SMC condensin II complex, subunit G2 EMBV3_30077 TCCTGGACCTGACCCTGCTCCACACTACACACTACCCAGCTCTTTTTTCCTTTGTAAATA Gene GeneID:511112|CCL21:NM_001038076:16_cdna Constitutive 0 NULL GeneID:511112 8 GENE CCL21 MGC134292 chemokine (C-C motif) ligand 21 EMBV3_12550 GGTCACCCCCAGGATCTACGTGGGCAACGCGTCTGTGGCTCAAGACATCCCCAAGCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10621 AAAGTACTCTGTGAGGTTAGGATGAGTGGCTTTTTTAGGGCGGGTCCTGGGTTGTGTTGG Gene BVV0102_144372 + 0 NULL GK000017.2:67759047-67783920 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076072 TCONS_00076068 TCONS_00076063 TCONS_00076066 TCONS_00076073 TCONS_00076067 TCONS_00076069 TCONS_00076061 TCONS_00076064 TCONS_00076065 TCONS_00076070 TCONS_00076074 TCONS_00076071 1 XLOC_046725 Coding TCONS_00076073 XLOC_046725 Coding Coding ADRBK2 17:67687079-67764482 j TSS57189 8089 1 TCONS_00076073_3 537 18 0.8957262086251 0.000565733238776321 4.61652099650604e-07 0.000347316730279564 0.000341493555253023 0.000161279896331688 1.48709307539672e-21 7.80999783204557e-17 3.43081593387956e-14 0.000172310458471386 3.22849028686424e-25 1.46787996713826e-11 2.49457871386612e-14 5.61260811985437e-05 8.31624159575764e-06 2.59297892121254e-18 4.93047967008363e-10 1.91674650334956e-16 0 1.69744672963382e-07 0.000555308063927219 9.16856978111759e-05 0 1.15806542094003e-10 8.25591135588223e-10 0.000464060864179221 4.68406568370641e-11 1.5904594059603e-10 2.94584073371173e-23 1.02960028093681e-10 3.79711304963381e-13 NM_174500.2 ADRBK2 Bos taurus adrenergic, beta, receptor kinase 2 (ADRBK2), mRNA. 0.0 3889 99.45 0.271232538014588 NM_005160.3 ADRBK2 Homo sapiens adrenergic, beta, receptor kinase 2 (ADRBK2), mRNA. 0.0 1912 88.04 0.186920509333663 TCONS_00076073_3 sp|P26818|ARBK2_BOVIN ARBK2_BOVIN Beta-adrenergic receptor kinase 2; 0.0 1107 93.39 0.998137802607076 3 coding 1 1 1 1 -0.0165716754632771 0.874488019450744 0.00930818041807212 0.847854247138314 AGATGATGCAGGCTGGGTCGCATCCGGCATCTGTGCAGTGATGACAAGGGAACAGCATGGTCAGGTCTGGGGCAGCAGCTCACAGGACAGATTAGAAGGGACGCCGGACGGATGATGGGAGCTGAGTGAGTGGCCGAGTGGTGATCGAGGAAGCAGCACGTCTCTCTCCTGCAAAGCGAACGTGGCTCGTAACTGATGCAGTGCAGTTAGGTTTCTTGCTATTTAAAGATTTTTGTTTGAATGAAATTAATGAAGCTGTACCTCAGGTGAAGTTTTATGAAGAGATAAAAGAATATGAAAAGCTTGAGAATGAGGAAGATCGCCTTTGTAGAAGTCGACAGATTTATGACACTTACATCATGAAGGAGCTGCTGTCGTGTTCACATCCATTCTCAAAGCAAGCCGTAGAACACGTACAAAGTCATCTGTCCAAGAAACAAGTGACATCAACTCTTTTTCAGTTGACCATGAATGATTTCAGCGTGCATCGGATCATTGGACGAGGAGGATTCGGTGAAGTATACGGTTGCAGGAAAGCAGACACTGGAAAGATGTATGCAATGAAATGCTTGGATAAGAAGAGAATCAAGATGAAACAGGGAGAAACCTTAGCCTTAAATGAAAGGATCATGTTGTCCCTGGTGAGCACAGGAGATTGCCCTTTCATCGTCTGTATGACCTATGCCTTCCACACTCCAGATAAACTGTGCTTCATCTTGGATCTGATGAACGGGGGTGACCTGCACTATCACCTTTCGCAGCACGGGGTGTTTTCTGAGAAGGAGATGCGGTTTTACGCCACAGAAATCATCCTGGGGCTGGAACACATGCACAATCGGTTTGTCGTTTACAGAGACTTGAAGCCCGCCAATATCCTCCTGGATGAGCACGGACATGTGAGGATATCAGACCTTGGTCTTGCCTGCGATTTTTCCAAAAAGAAGCCGCACGCGAGCGTGGGCACCCACGGGTACATGGCGCCCGAAGTTCTGCAGAAGGGGACCGCCTACGACAGCAGTGCCGACTGGTTCTCCCTGGGCTGTATGCTTTTCAAACTTCTGAGAGGTCACAGCCCTTTCAGACAACATAAAACCAAAGATAAGCATGAGATAGACCGAATGACTCTCACCATGAACGTGGAACTTCCAGACGTCTTCTCCCCTGAGCTCAAGTCCCTTCTGGAAGGCCTGCTTCAGCGAGATGTCAGTAAGCGCCTCGGCTGCCATGGAGGCAGCGCACAGGAGCTAAAAACGCACGACTTCTTCAGAGGCATCGACTGGCAGCACGTCTACCTGCAGAAGTACCCTCCACCCTTGATCCCTCCCCGAGGGGAAGTCAATGCAGCCGACGCCTTTGACATCGGCTCATTTGATGAAGAGGATACCAAAGGCATCAAGCTTCTTGATTGCGACCAAGAACTCTACAAGAACTTCCCTCTGGTGATCTCTGAGCGCTGGCAGCAGGAAGTGGCGGAAACAGTTTATGAAGCAGTAAATGCAGACACGGATAAAATCGAGGCCAGGAAGAGAGCTAAAAATAAGCAGCTTGGCCACGAAGAAGATTACGCCCTGGGAAGAGACTGCATCGTGCACGGGTACATGCTGAAGCTGGGGAACCCTTTCCTGACCCAGTGGCAGCGCCGCTATTTTTACCTCTTTCCGAACAGACTTGAGTGGAGAGGAGAAGGCGAGTCGCGACAAAGTTTACTGACAATGGAACAGATTGTGTCCGTGGAAGAAACTCAGATTAAAGACAAAAAGTGCATTTTGTTGAGAATAAAAGGAGGGAAGCAGTTCGTTTTGCAGTGTGAGAGTGACCCAGAGTTTGTGCAGTGGAAGAAAGAGCTGACGGAGACATTCATGGAGGCCCAGCGGCTGCTACGGCGAGCCCCCAAGTTCCTCAACAAATCCCGCTCAGCCGTCGTGGAACTCTCAAAGCCTCCCCTCTGCCATAGGAACAGCAACGGCCTCTGAACCTCTGACCGATGGGAAGGGTCCTGAGAGAAAGCACCTCCTCTGGGCAGTCCACGTGGGCTGCTCAGTCCTCAGAGTGCAGCCTTGGGGAAAAGTGTGAGGGTGAGAGATGGAGTCGCTCCCCTCCGGGGTGCTCTGTGGCTGGGGTGGGGCCAGGACTCCGAGATACTTCTACTAGGAGTGGTGACCACCGTCAGGCTCGGGGGCGCCTCCTCCCTCCTAAGGGCCTTCTGCCACCATCGCATCTCTCTGTCCTCGAAACTACTGAAGAAATGAAATTCTCCTTCTTTGCCATATGTTTCTTTTGGTTATGGGTGAACCTAGAACTTGAAATGCTTCCTACTGATCACGGCACTTTTTACATCCGCTGTCAAGCGTATCTCAGACTTGCTAAGATGGGGTCGAGCAGTCTGCTGTTCAGATTGCCCTGCACTGCCACGTTCTGTCCATCAACAGCTGCTCCTGGGTTTGACTGTCTTTGCTCCGTGCTACTAGGGGGATGGCAGGCCACCCCGGGGGTGTCTCTCATTCTCCAGGGCTTGAAAGCTGCAGAAGTTTTCTTAGAGGGTTGCACCTGGGCCCTCCCCATGGGTGCTGCACCCACGGGTACCAGCCTGCCTGTGACAGGGAGCTTAGGCAGCTGGGGATTGAGGACCCTGCTCCCGACCCCACCCCTACCCCCTGGGGGTGTGGGAGCACTCAACTCTGGAGGCATCAGATCATAGATCTTCAGAAGGTTTGCAGTGGCTCTACGAGAGAGGCAGTGGCGGTTTACATCTCAAGGCAATAGCTATTTTCAAAACCCTCCAAGTCCACAGCACTTTCCTGTGTCTGGGTGCCCAGGACCGCCTTAGGGGGGCGCCTGTCTTGGGTTTGGACAGAAGCGGTCATGTGACCCAGCACCTCTGGTTCCCTCTGCCTGACCTCAGGAAGCATCTTGGTAATGAATGGGTCAAGGAAAGAAACTGTGTTTGACATTTCAGTATAATTTAAAATGAATTTTATTGAGAAAGGAATGCCGAAGATGAATGTGCCCGATGGGGTTAACTGTGTATGTTGAACTTGTGCTGTCATTCAACTGTCATTAGTGATCCCGGGCCCGGACGGGCCGCCCTGTGACAGCAGTGGCTGGGGCCCAGTGGCCGTCCGCTCCCCGGGGTTGGTGTCAGCCCTCAAATAAGTGCTGGGTTCTAAAACCCAGTGTGTTTCCCAGTGATGTCCTCCGTGTCATCAGACTAGAAATAATAACAGTAATTTTCAAAGTCAACATATTTGTCCTATTCTTAGTGCACTTTTATTGTCTGTTTCCAAGTCGACTACTCACAATATAAATAACTTGACATCGTAATTATCTGTATCCTGTCCTCGATATTTTTAGTGGTTCCAAATCTCTGTGTTTACATTCGTGTGCCGTGCTCACTGGGAAAGTCAGTCCTTCTTAACGAAACGACGTCTTGAGAGTTTGGGAAGATAATTACTGAAAGAGCCTTTTGTTTCATAGGAATTACCTTGGAAAAGAGACTGCGAGGTTTGCTATTTATCTCACTTGCTAGTTGGAGTGTAATATACATGTTCTGCTCTCTGCTGTTTGCAGTGTAGAAGTTGGGGCCTACTATTTACATGGATTCTCCTGATTTAAAAGGGAAGAAGAGTATTCAAATTCTATTTAAAAAAAAAAAAGTTGAAATAACAAAAAAACGGAGATGGAAAAGCACTTCATGACGAGTGAACATCTTCCCATAGCGATTGTCTGTCACCGTCACCACTGCTGTTAGTGGCTCTGTTGCAAGCGCGCGTGTGCTCAGCGCTTACAGTTCAGAGATGAGTAAATGACGGTTTAGAAATTGCTGAGCCTCGTGCCTCTGCCGGACAGAGTAGAGATGCAGCCTCTCGTGGAGAAGGTACACGGATTCCTCAGGGGTCTGGGCTTAGCGTCCCAACATTGCGTACCCAGGACACCAGCTATGCCAGTTTGCATCTCTGAAAAATATCATTTAAGCTCTGGACCAGAACATAAGGTCATCTTCTCTTTGGAAAAGAAAAATGAATTGGAAACATTCCGAAAGCCCTGTTGCCTCAGATTTATTCCAAGTAAACTTTCACACTTCCTCAACTCGAGATGGATGGATAAGAACAGGGCTGAGAAGTGTCATGTGGACGTCATCTATTAAAAGTACTCTGTGAGGTTAGGATGAGTGGCTTTTTTAGGGCGGGTCCTGGGTTGTGTTGGGGTCTAGTTTGACACCCCTGGAGAGGCCAGTCTTCCTCCTGAACTCATTTGTGCAGCCATTCTGATGGGGTACGTGTCTCTACTGCCAGATGGAAGACTTTTCCGGGACCCTTCTGTGCCAGCACTTGGTACCCACATGGCCAAAGAAGTCGGTTGTTTTTGGAAGACTTGGTATACGTGGCTGCTTTAGGTCTTCAGGTGTGGCTGTAATTACGTTTGGACCGTTCAAAAGGATAGAATTGAGCACAAGTACTATCATTATTTTAGATATGGTTGGGATGTTTTAACGTTGTTGGAGAAAGTCGTCGAAGCTGATATTTTTATAAAATTATGTTAACAATGTCTCTATTTCATAAATCAAAGAGATCATTAAAGCAAAACCTAAAAATTGATTATGCTGCTATGCGACATCTATGAAGTGAATTAAAAGCTTTGGAGAATCCGAGGTTATTTATTTCTTTTTTTGGCCTGTTAACATTCTCCTTGGTGCATTTATCCCCTTATGTCATTGGGGCTCATGGTTTTTTCCTTCTCTGTCATGTTTAAGTATGATTTTTCAGCAAAACTGCTAGGAACCAGCTGTTGTTTCACTGCTAAGGAGACCGTTTCACTACTTGTGCCTCTAACTGGTCAATTCACAGACACGACAACTTCAAGTTCTGTATGTAAAAAGAAGAAAGACAGCATTCTGCTCAAGAAAGACAGCAACAAAGCTGGAGAAGTAAATAGGGCAACAGCCACAATGTTTCGCCTTGATTTGCAGTTTGAAATACTCGGTACAGACACTGGCAACAATTGTTTGAAGACCCTCACTGGTCATTTTTTTAAAATGTCATTGACCAATTGACAATGTGGTTTAAGTCTGAAGATCAAAGTGTGTTCCCCAGCCCCGCCTGAGGATTTTTTTTTTTTTTTTCAATTTGGAATTTATAGTTTAGTCAATCCAATACAACGTTTGATTTTTTCTGTGGAATTGGCTTTTCTAACGTTTCAAAATTTTAACCCATCAAAAAGAAAAGAAAATTCTCAAAGTTGGACTTTTTTTGCTTGATGTAAATCTGTTAAAAAAATTTTTGCAATGTGTTAGTGTAAGATAAAACTTTTCTTGCGTGATTTAATTAGTTGTGATTTTTCTCACTTACATTCAGGGAAGTGTGTGTGTCATTCAGAGATACTTGAGGAGTGAACGCCTCGCCTGCCAGGGGATGGGTGTGTTCTTTGTACCCAGAGAGGAGTCAGCTTTCATTCAAATTTGTGACAGATGCTGAGAAATCCTGGTAGAAGTGGGGCGAAGAGAAAAGGGAGTGTATTTGCTGGTAAAAACCCATCTCTTTACACCATCAAGGACCAGGGAAGTTACAGTTAAACTTGGGGCTTCAGGGTTGACCTCCTCTTAGAAGAGGAGTTGAATAGTAACTCTTGTAAGACTCAGTCTCTTTGACTGTGGAGCTTCTGGACTTACAAGATGCTGTTTGCTTTCCACCAGGACTTGAGGTTGCCCCTGTTTGTCATCCAGCATCCCGGGAAAGTCACGTGGAGCCCAGAGCTGCTGCCTGGCTGGCTGTGTGTGCCTGGCAGCCAAGCAGGGGGCCAGAGTGGAGGTGTGGGTGGCTGTCAGTGCCCTGCCCTGCAGGTCAGGTGGGGATGTGGCCGCCCAAGCTCTGAAGTTACTGTAATTCCCCGCCGATAACAAGACGAGACTTGCCGCCTGAGCCAGGCAGAGTGAGCTCTAACAGTTTTTAACTTTTCAAAACATTTTTTTTCCCCCTAAAGTTCTAATATGATTTTTCCTCCTGCATCGGGTTGACTTGAGAAGCTTTAAAGAATTAATCATTTAAATTCATGTTAATAAGAATTTTTGTATCCAGGCCACATTTTAAAAAATTTACTGTAGAATGAATGAATTGAACTCTAAAATGATACTTCTTGGTTTCCTCGAATCATAATGGCCTTTAGATTTCCTTCATCCTCAAAGACTTAAGAGAGCCATTCTCTGACAAGAGAGTGACAGAGATGCCCAACTCTGGCAATGGGGACACGAGTGACCGGCCACTTCACTGACATGGCTGGGTTAGCACTTACTGATAAATGTAGCACCCTGAATTTTAAATTGCCTTTATTAAAACACGCACACACACGTTACAGAAAATGGATTAACAGTATATGCATTCATCAAAACCATATATAGGAAAAATTTAATTCTTCATTTTAGACTTAAATAACTCAAGTTCTTACAGTAAACTCTCTTATACCTAAAAAATCTCAAAGTCATCTCTGAAAAACTGATAACTATGCTTCCACTTTAGTTTTTTTCCTAACATAAAATGTGTCTCATGTGCGGGTAGGGAAGGGAGAAATATTTTTAATCATGTACTCATATTTCAAAGGACTTGAAATTCAACTTCTTGTTTCTCAGTTGATATATTCCATGATGTACATTTTATATATGGTTTATAAGCTAAGCACTGGCCTTTTTTTTTTAAGTTTTATTGTTTGTATTTTTCTATGTTTTAACTAATAGATGTGGCTTTTTTCTGGGTAACATTAAGATGCCAAACTACATATATATATATAAAAACAAGAGTTCTATTTTAGCACAAAAGCATTTTATATTATTTATTGAACCCTTTCTTTGTTCTCATCAAAAACATTGCTTACCGCTTCTGCTCCTTTTTATTTGTATAGTTTGTTATTTAAGAAAACACACTCCTTTCTGTTTCATTTTGTTTTGTTCTGTTCACAAAATAAAATGGAAACAAAGCCTATAGCAGTGTGGGGCGGACATCCCTTCTCACGGCCGCAGACTTTTTTCAACAACAGCTAACCCTCAGACCTGCGCCGAGAGGCACGTGCCCTTCTTGGGTAACATCTGACCGTGCACTTGCCGTGAAGTACTGCTGTCATCTACCTCTTCTGAAGGCCCTGAGCTTGTGGACAGGTTCCCCGAACGCGCCACTCTAGACCAGCTCCACCATAGAAGAGCTTCAGGAAAGCATGTCGGAGTCCTCTCCTCATGATGTCGATTTCGCAGCAGCATGTAGGGGCCCCAGCAAGCAGGGCAGGTAGGTACTCGTATGGCCAGCCTTCGGGAGCCGAAGTCCACCTGCAGAACATCACTTCTGACTCTTCCTGTGCCAAATCACCCAACCAGTCTTACCGTCGCCTCAAGATTTGACCGTAGCACCTGATTCATCAGCTACCTAAATGGAAGCCTCTTCCTCCACGTTCTTTAGAAAATGGCCAACTGGGTTTAAAAGCAGCACTTCTGGGAGCAGCTCCTTCGAACGTGACTCTTCCCACCTCGCCGATTCAAAATGATTTGGGAAATGGGCTTGTCCACCGTTAAAACTTTGCAAGAGGTCTTATTCTTGAGCAGACCTTTGAGGGGTCTATGTGAAATAGAATGAAGATGGGTCCCTGTGAGGGGTGAGCGGGCCCGTCCTCACACGCTGACGTTTTTCTCTCCTTGTGTCCCCTGCTGCATAACCATCCATGCGGTCACATATTTGTTCTGTTTGTGGCCAAAGGGTAACACCTTTGAAGAAATAAATCGTTTTTTCTCGTGCATTGCTATACCAAAAGAGGTCAGTGAATTCGATTTTATAAATCTAAAGATTGTACCTGTTATCTGGTTTTCTTTCTCTTCCCATCGCTCGCGCCAGCAGAGGTCACAGCCTCCTCTGAGTGTGTGTTTACCGGCCTGAAATCGTTTCCCATGTGAGATGCTGGGCCAGGTCCAAGGTCACCTGCCCCACACGTGGCACGTCACTGTTGGGTAGTATCGCCATTTTTCATGGTTATTTGGGGGGCAGGCGGGCTGGTTTTCTTTGTTGATAAATTACTTATATAAACCTCAATAAAAAGGATCTGTATACAAAGAGACTTA EMBV3_04899 TAACAGTTGGAAGGAGAGCTGGAAGCAGAAGTTGCCCCAGGTTTGACAGGCCTCAAGGAT Gene BVT0102_084706 - 0 NULL GK000014.2:3773333-3870892 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28628 TCCAGAAAGAACTGCAGAGGCTGCAGCAAGCGCACTGACAACAAATACGACCCAAGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40637 TGAGTCTTCAGACAAGAAATCCTTCCTCCCGGCAGACATGGGAACGCTTTGTGTGCTTTC Gene GeneID:535834|SRD5A3:XM_002688259:179_cdna Constitutive 0 NULL GeneID:535834 6 GENE SRD5A3 NULL steroid 5 alpha-reductase 3 EMBV3_10183 TCCAGCTCCGCAGTCAGGCAGGTCTGGGTTTGAATCCTGGGTTTCTGTCCTTACAGGTCA Gene BVV0102_115580 + 0 NULL GK000004.2:107062132-107063157 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185246 1 XLOC_111530 Coding TCONS_00185246 XLOC_111530 Coding Coding TRPV5 4:107030535-107062787 j TSS137756 3548 1 TCONS_00185246_2 731 0.148252536640361 16 0.890484015999504 9.6566673157496e-27 9.32491004671669e-211 3.34311099479067e-238 3.28521089898803e-37 5.82738647783579e-22 1.46506777366899e-32 1.00624955567934e-42 5.23146109761907e-63 5.21891047638509e-17 1.65054945187879e-16 1.17909066329269e-09 0 7.35198259839481e-156 9.77865704466779e-22 3.72428363089882e-107 0.00128946653365568 0.000445891291620215 1.59131001716863e-07 1.33467772333087e-29 8.55969156988997e-24 4.3162398657658e-144 0.000159167424626776 8.7706926003751e-10 0.00351870798476739 1.58489681729331e-189 4.99444951348029e-45 1.53143910844442e-140 9.82379698097092e-05 7.54772889048084e-05 0.000318214735798283 XM_602687.5 TRPV5 PREDICTED: Bos taurus transient receptor potential cation channel, subfamily V, member 5 (TRPV5), transcript variant X3, mRNA. 0.0 5698 100.00 0.890078917700113 NM_019841.4 TRPV5 Homo sapiens transient receptor potential cation channel, subfamily V, member 5 (TRPV5), mRNA. 0.0 2390 83.64 0.633878241262683 TCONS_00185246_2 sp|Q9NQA5|TRPV5_HUMAN TRPV5_HUMAN Transient receptor potential cation channel subfamily V member 5; 0.0 1206 80.72 0.991792065663475 6 coding 1 1 1 1 0.0216285703575213 0.838554871607598 -0.024012120219535 0.715671247695037 CTGCGGGGTACTAGGCAGAGCAAGAAGTTCTGGGGGCTTTTGAACCCCTCTGTGGAAGAAGAATCAACTGTCCTTGAGCTGTTATGACTATGTTTTACAGACTCTGCTGTGACAGCATGTAAGTATCACTCCAGTTTTACAGATGAGAAGACTGAGGCACAGAAAGCTCACCTAACTGACCTGTAAGGACAGAAACCCAGGATTCAAACCCAGACCTGCCTGACTGCAGAGCTGGAGGGCTTTGCTTCTCAACTCTCCTGCATCCGAGGGCCCCCAGTCCCCTCCATGCACGTGTACACCCTGCACAGCGCCACGCCAGATCCACTTGTGACCCATCCCTCCTCCTCGTCTCCGCTTCAGCTGCCGGCTGCATCCTAGCCCTGCTCCCTTGAACCACCTCCTCCCCGCGACTGGCCACTGCCCGGAAGGAGAAGACATGGGAGCACCTCCATCCAAGGCCAGGGGTCTCTGGATCCAGCTTCAGAAACTGCTGACCTCCTGGCTGGTGGGACAGCAAGACTGGGATCAGCGTCTGGATGAGATGTACATGCTGCAGCAGCAGAAGATTCGAGAGTCTCCTCTGCTTCGGGCAGCCAAGGACAATGACCTGTGTGTCCTGAAGAAACTTCTGCTGGACCGAAACTGTGACTTCCGGCAACGAGGGGCTGTCGGGGAGACGGCACTGCACGTGGCCGCCCTCTATGACAACCTGGAGGCCGCCATGGTGCTGATGGAGGCTGCCCCTGAGCTGGTCAAGGAGCCTGCCATCTGTGAGCCATTTGTAGGTCAGACGGCCCTGCACATAGCAGTCATGAACCGGAACGTGAACCTCGTGAAAGCCCTGCTCGCCCAAGGGGCCAGTGTCTCTGCGAGGGCTATAGGCTCCGCCTTCCGTCTCACTCCTCACAACCTCATCTACTTTGGGGAGCACCCTCTGTCCTTTGCCGCCTGCATGGGCAGCGAGGAGATTGTGAGGCTGCTCATTGAGCACGGTGCTGACATCCGGGCCCAGGACTCCCTGGGAAACACAGTGTTGCACATCCTCGTCCTCCAGCCCAACAAAACCTTTGCCTGCCAGATGTACAACCTGCTGCTGTCCTACGACAGGCGAGGGGACCACCTGCAGTCCCTGGACCTCATGCTCAATCACCAGGGCCTCACCCCCTTCAAGCTGGCCGGAGTGGAGGGCAACACTGTGATGTTCCAGCACCTGATGCAGAAGCGGAAGTACATCCAGTGGACGTGCGGGCCGCTGACCTCCACTCTCTACGACCTCACAGAGATTGACTCCTGGGGAGAAGACGTGTCCTTTCTAGAGCTTGTGGTCTCCTCCAAGAAACGGGAGGCTCGTCAGATCCTGGAGCAGACCCCAGTGAAGCAGCTGGTGAACTTCAAATGGAGAAAGTATGGGCGGCCTTACTTCTGCATCCTGGGAGCCTTGTACGTGCTCTATATGATCTGCTTCACCATGTGCTGCATCCACCGCCCTCTCAAGGCCCGTAGTGGCAACCGCACAGACTCCCGAGACATCACCGTATTCCAGCAGAAGCTGCTCCAGGAGGCCTACGTGACTCAGCAGGATAAAATCCGGCTGGTGGGGGAGCTGATGACGGTCATCGGGTCAGCGATCATCCTATTCCTAGAGATCCCAGATATCTTCAGGGTCGGTTTTTCCCGCTATTTTGGACAAACTGTCCTCGGGGGGCCATTCCATGTCATCACCATCACCTATTCCTTCCTGGTGCTGGTGACCATGGTGATGCGGCTCACCAACACCAGCGGGGAGGTGGTACCCATGTCCTTCGCCCTGGTGCTGGGCTGGTGCAGCGTCATGTACTTTGCGCGAGGATTCCAGATGCTGGGCCCCTTCACCATCATGATCCAGAAGATGATTTTTGGAGACCTGTTGCGTTTCTGCTGGCTGATGGCTGTGGTTATTGTGGGATTCGCCTCAGCGTTCTATATCATTTTCCAGACAGAGGACCCGTCCGCTCTGGGGGAGTTCTACGACTATCCCATGGCGTTGTTCAGCACCTTTGAGCTTTTCCTCACCATCATTGATGGGCCCGCCAACTACGATGTGGACTTGCCCTTCATGTACAGCATCGTCTACTTTGCCTTCGCCATCATCGCCACGCTGCTTATGATCAACCTGTTGGTCGCCATGATGGGCGACACACACTGGCGGGTGGCCCATGAACAGGACGAGCTCTGGAGGGCCCAGGTTGTGGCCACCACGGTGATGCTGGAGAGGAAGATGCCTCGCACCCTGTGGCCACGCTCTGGCATCTGTGGGTACAAGTACGGGCTGGGGGACCGCTGGTTCCTGCGAGTTGAGACCAACCAAGACCAGAATACTTTGCGAGCACGTCGCTACGTGGAAGCTTTCAAGGGCTCAGACAAGGAGGAAGGACAAGGGCATCCCCCTGAGAAACGGCCCTCGGTGACTGAAAGCGGGCTTCTAGCCAGAGCCTCCCTGGCCCTCCCGACCCCTTCCCTGTCCAGGACCACCTCTCGAAGCAGCGGCAGTCACCGAGGCTGGGAGATCATTCGACGCAACACCCTGGGACACGTGAATCTCGGACTGGACCTTGGGGAGGGGGATGGAGACGATCGGGTTTATCAGTTATGATCAGGACCCTTGTTACTCTCGTCCTGACTCCAGGTGGGCCTGGGTGAAGGCAGAGAGACAGAGATACTGCTTGTGAAGCATCGCCCTTCCTGCCTGTTAACCCTGTGAGGGGTGGACAGAAGAATTCTCCCAGGCCATCCATACCTCACCCATCACCTCAGCATTCCCAGGAATGAGTACCTTCTGGCTTCTTGGAAGTCTCACATCTTGGGAAAAGAGGGTATCTGTTCAAGCAGAGTTAGGCTTGGCAACTAAAGATACCAGGTAGGGATGCTAGGCCAAAGGCTGGGTCATCATGTCCTTTTCTGCCCCATGAGGTGCTAGACTGTGAGCTGTGACGTCTCCCAGGGCTTCAGGAAGCACAAGCCGGGCATGGCCCTGAGGTTGTAAGCCTCACCTCTTCCTGTACCTCATAGGACCCTCTCCCCACCTCACAGCCAAACCCACACTAGAAAACTGCAAGAAAAAAGGTTATTTATCCTCCCTTTATTTAAAAAAAAATGTATTATGATATGCAGAACATAAAATGTACCATTTTAAGCATTTTTTAGCTGTGCCGTTCAGTGGTATTAAGTACATTCACATTGTTGGGCAACCATCACCACTATTCATCTGGGGAATTTTTTAAACCGAAAATCGTATACCCATTAAACACGAACTCCCCATCATTCCTTCCGCATGGTCCCTGAAACCAATATCCTACTTTCTGTCTATGATTTTAAGTTTTCTGGTTACCTCGTATAAGTGGAATTATCCAACATTAGTCCCATTGTGCCTGGCTTATTTGATGTAACATAAGGTTTTCAAGATTCATCCATGCTATAGTGTGAGTCGGAATTTCATTCCTTTGAAAGGCAAATATAATAACATCTCATTGTATGTTTAGATCACTTTGTGTTTATCCATCCCTCCACTG EMBV3_04693 GTCTTCCAGGAGGCACAGAAAGACGTCCCAGGATGAGTGGGATAAGACCCAAAACGCTAT Gene BVT0102_298786 + 0 NULL GK000030.2:67800530-67896114 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244665 1 XLOC_150517 NonCoding TCONS_00244665 XLOC_150517 NonCoding NonCoding - X:67828775-67829941 - TSS183830 1166 2 TCONS_00244665_1 56 1 0 0.000431823867791613 0.000120650149511302 0.000286073886717631 5.35826763863427e-05 0.000346277698774837 2.28482084732234e-51 1.50044164970229e-05 1.01453073721035e-05 1.35336795699302e-05 0 0 0 1.23039665898531e-05 2.01662462745841e-05 0.00997857664919605 0 0 0 4.13978972539234e-05 0.000193143880840673 1.04141405220614e-05 0 0 0 0.000128880166720908 5.08725078446973e-19 0.000715488082357139 0 0 0 XM_003583919.2 LOC788801 PREDICTED: Bos taurus ferritin-1, chloroplastic-like (LOC788801), 5e-88 329 73.41 0.487993138936535 NM_000146.3 FTL Homo sapiens ferritin, light polypeptide (FTL), mRNA. 4e-64 250 72.45 0.398799313893654 0 noncoding 0 0 0 0 0.00889039900255256 0.945491180237962 0.0277253973208032 0.570422800260462 AGACCCAGAGACGACCCTTACTCCAGCCTCCCACAACCCTCCAACATTTTTTTTCCAATGTTCCAACCTCTAATCAGCAGCCACTTAGACATCCTTGACCTCCAGGACCAGCCAACACCATTTTTTGAGCTTAACTCCTTTAATACCTGATCAACCATTAAGCTCCCAGACTCATCAGAATTATTACATTGAGCAGGAGGCTGCCATCAACATCTGGGTCACCCTACACTTATTTCTCTCTGGGCTGCCATTTCCACCACGGAGGATGTGACTCTGGACATGTCGGCCACTTTTCTGCGAATTGGCCAAGGAGAAGCACAAGGGCACCCAGCGTCTCTTGAAGATACAAAACCAGCGCGGTGTCAGCGTCGTCTTCCAGGAGGCACAGAAAGACGTCCCAGGATGAGTGGGATAAGACCCAAAACGCTATGGAAGCTGCCATTCTCATGAAGAACCTGAGCCTGGACCTGTGGACCTGCATGCCCTGGGTTCTGCCCGAGCAAACCTCCATCCCTGTGACTTTCTGGAGAGGCGCCTCTTGGACGAACAGGTGAAACTCGTGAAGTAGATTAACACCACCTGATCGGCCCCAATCCCCCACTCCCACAGGCTGCCTGAATTGTGTTGGGGGCGGTGAGCTGAGCCAGTAGCTGAAACTCTAGTAAATGGCAACCACGTGACTAACCTCCGCAGGCTGGCTGGTCCCCTGGTTGGGCTGGGCGAGTCTCTCTTTGAAAGTTTCACCAGGAGCTTCCGGAGCCCAGCAGTCTTTGAGAAGCCCTCCTGGTGTCAGGGCTGCAGCCTGAAGCCCCTCCCTGCAGCCACTAGGCAGCTTTTTAACCACCCTGGAGCCCTCTCCCAAGCCTCGCACCAAATGAAAACAATAAAGTTATTTGCAGCCAGAAAAAGAAAAAAAAAAAGATAATTTACACATGACTTTAATTCTGCTCTTTCTGAAAGGATACCTGGTTTCTGTCTTTGTTTTCCTGAGATACTGAGAATAAGACAAGTAAATTTTGGAGAAGAGGATTTCCTTAGCTGTGTCTCATTTTTTAGAAAATATCTGTTACTGAACCACAAGTGAATTATTAATCTAACAGGAGCAAAGACCAGGCATCTATGGTGGGAAACTAACTTTTAAAATTTCTCAAGCCAACACTCAAAGC TCONS_00244663 TCONS_00244664 s 3' 28247 TCONS_00244663 TCONS_00244664 s 3' 28247 EMBV3_05983 CTGGAAATTCACCTACAACCCCATGGACCCCCTGGACTACAAGGATCAGAGTGCCTGGAA Gene GeneID:280756|CRX:NM_173904:20_cdna Constitutive 0 NULL GeneID:280756 18 GENE CRX NULL cone-rod homeobox EMBV3_37476 ATTGAGCTGGACCACCTGTGGCTGGAGACAGCGTGTCTACAAAGAGCGCCTGGGCCTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19467 GATCTCAGGGGCATTACTCTAGTGTGCCTTAATTGTGACTTCCTAACTGATGTTTCTGGC Gene GeneID:617261|ZNF280D:XM_002690858:232_cdna UTR3_Alt 4 NULL GeneID:617261 10 GENE ZNF280D NULL zinc finger protein 280D EMBV3_31028 CACACTGTGCTATATTGCTGCTGAATTAAATGCACTTTTCCCCACAAATGGGGCACTGGC Gene GeneID:511417|SHOC2:NM_001101943:33_cdna UTR3_Alt 2 NULL GeneID:511417 26 GENE SHOC2 MGC151791 soc-2 suppressor of clear homolog (C. elegans) EMBV3_27183 ATGCCAGCAGAGTGACTAAGCCTGAGCACCGCAGCTATTGAACCTGGCCGCTCCATATAA Gene BVT0102_139579 + 0 NULL GK000012.2:70953157-71321404 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037196 TCONS_00040865 2 XLOC_021325 XLOC_024679 Coding TCONS_00040865 XLOC_024679 NonCoding NonCoding - 12:71219277-71222286 - TSS30366 3009 1 TCONS_00040865_2 111 0.575274177467597 1 0 0.000390972977015293 0.000567707856949972 0.000352393805402944 0.000326112409329055 0.000396526893923361 0.000113330581626179 0.000447375088137076 0.000291247443742001 0.000471555577014731 3.11537928056057e-05 1.06509187192984e-05 3.18868517875732e-05 6.5001604044637e-05 5.47157642260329e-06 0.000176095069382834 0.000216512496334771 5.51753943310066e-05 0.000204991266509719 0.000311003170537911 0.000655593303070571 4.85945260146607e-05 0 1.06710527067798e-05 5.57149310547594e-06 0.000272663390036958 0.000315891499334833 0.000313536920925225 0.000100552689665066 2.09737148269501e-05 1.69837497776266e-05 XM_005213921.1 LOC101906170 PREDICTED: Bos taurus uncharacterized LOC101906170 (LOC101906170), 9e-58 230 85.02 0.068461282818212 XR_111226.3 MGC39545 PREDICTED: Homo sapiens uncharacterized LOC403312 (MGC39545), 5e-23 114 71.48 0.0877367896311067 0 noncoding CAACTCTGCTGTGGGATTTTAAAGGAAGGATGTAACTGAGTTCTCATCTGCTCCCCAGATGGATGGCACACGCTTCATCGCCTTCTATGGCATTCTGTCATCCTGGCTCACAGACTGTCTAAGCTTGCTGCCTCCCTCTTTCTGAATTTTCCAGACCCAAAGTGGGAAATCAGGTTTTTCTATTTTACTTGTAACACAAAATGATGGTATGGGAGTCTCCTCTGCAAAGCAACCAACTCACCTGGCTTCTAGCAGTAGGTAAGGCACCAGCTGTACTTGGGTTGGGGGGGTTCTATGATATCCTGTATCCCCTCTACTTTGTCCTTGCCTGGGAGGTTGAGGATGATGACCATTGGGGACAGGGGTCACCAACTCTCTGCCTCTTGTCCCCAGACCTTTGCTCTCCTCTGGCTTGGGTTTCAATCTCTCTTCTCTGGAGGAAAATTCATTTGGTTAAGTTTTCTTGCAAACTGTGCTTTTCATGCCAGCACCAGTGGTCTTTAAGCTATAACCTCAAGGAATTTTCATTCCTTTAGCACAAACATTCATACCATAGCAAGGACAATTAATTTAATATTCTGATAAAATATCTTGCTATAATCTCCACTTATTGAACATCCCTTCTGCATCAGAAATTACAAAAAGCACTTTCACATAAACAGTAACTCCATGAGACAGTTATTACTTTTTTTTTTTTTTTTAATTTTGGCTTTGTTAGGGCTTTGTTGTGGCACTCAGGACCTACGTTGTGTCATGTGAGATCTTTCATTGGGGTACATGGACTCTCTTATATGGAGCGGCCAGGCTCAATAGCTGCAGTGCTCAGGCTTAGTCACTCTGCTGGCATGTGGGCTCTGAGTTCCCTGACCAGAGATTGAAACCAACTCCCCTGTCTTGCAAAGCAGATTCTTAACCACTGGACTACCAGGGAAATCCAAGATACTACTTTTTAATACCTATTTTACAGATGAGAAACTGAGTTCAGAGAACATGTGTCACTCAACTAGAGGTGGAAGAGTTGCCCCTATTATGGGGTGGCCTTCCTTATTTATCTGGTACAGCTTCTGGAAACCTTAAGAGTTTCCAGTTTTTGGAGGATCAGATAGAAAGAAAAGACAAATGTTTTAATTCTACTTACAAAGTGTAATTAACCAAATTGTTGTAAGTCATAATTAGCTTGAGGGAAAGGATTTCCTTATGTTAGGAAAACACTAACTTAATCACTTAAATCACTAATATTTTAGACAAAAACAGTAAAATTTATAAGCATATTCTCCAGTTCACTCAGCAACTAGTCCTTTTTGTTAATGGTTTTATTGAAGGCATCAGGTTTTCCATTAGGACTTCATAATTTCTTACAAAGTTTAGCTTGTAGTTTGAAACTTATCAGAAATATGTACTTGTCAAAAGTCCTTCCCATGAATCTTCTTAAAAATGAAGCAGTTTTACAAACACATCTGAGTACAACAACAACTGTCTGTATGATGAAAGACTTCTTGCATACACGTGCAGGCTGTACAGGTCAATAAATTGTTTTTCTCTTGTTCATCTGTCTTACATCAATTGAATTTCCCAGGCCCCAGCCAGAGGGCCTAGAAGGGTAAAAGGAAAAGGAATTTTCTCCTCCCTTACATGGTAAAATATACATAACACAAGTGAACAATTTTAATCATTTTAAAATGTACTATTGTGGGTGTTGATTATATTCACACTGCTGTGCAACCATCACCACAGTCCCTCTCCAGAGCTTTTTCATCTTCCAGTTGAAACTGTGTCCATTAAACACTCCCCACCCTCCCCGCCCCCCACCCCCCCAACAAACACCATTCTACTTTGTGTTTCTATGAATTTGACTAGTCTAGGCCCCTCATATAACTGGAATCACAGTATTTGTCTTTTGGTAACTCAGTACTTCTGGACACCATGTGTGTACTAACCAATCCTAACCAGTTCTCCAACTCACCAGACACAACTGTGTCCCGCAATTTAAGTCAGTTCTGACACTATCTGCCTGAAGTTAGTGTTAGACCTCATCATGGGTTAAGGACTCAGTCTCACAAGACTGCCCCTTCTCAACTTCAGAGCCAGTCTTGAGTCCTGTTCTCCTTATGGACTGCTCATAAATCAGGGTTCCCATAACCCCTTCCTTGGGTTTGGTAATTTTCTAAAGTGGCTTACAGCTCAGGAAAACAGTTTATTCAACTAGATCACTAGTTTATTATAAAAGGATTCAAGTCACGAACAGCCAGATGGAATGGATGCAGAGCAAGGTAGGAGGAGGGGAGGGGCTTCTAGGCCCTCTCCAGGAGAGAGCTTCTCAGAACCTGCATATGTTCACCAGCCAGGAAGCTCTGTGGACCCCATCCTATTCATTTTTTATTGAGGCTTCATAGAAACATACTTAGGCAAGGTTGATTAAAGCATTGGTGGGCTGAAACTGCCAACCCTTTAATCGGTGTGATTTTTCTGACAAGCAGATGCATTCACTAAAACTCAGGTGTAGTTGAAAGGGGCTTATTACCATTATCAAGATACTTTTTCACTCTTAGAGCACCTAAGTGTTTTAGGAGATCTGTGCCAGCAACAGCATGAAGATTAAATAAGTATTCTGAGTCACAAGTCTTCAAGGTTCATCCACTCTGCAGCATGTGTCAGAATTCCCTTCTTTTTTAAGGGTGAATGATACGCCACTGTATATTTATACCACATTTTGTTTATTCATTCCAGAAATAATACTTTTGAATGCTTCCTATATATTCATGTGGGCTTTATATACGGGAAAAAAGTTTGAAGTTCTTTTTTATTTATTTATTTATTTTTTTACTTTACAATATTGTATTGGTTTTGCCATATATATTTCCCTCTTGTACTGATTCCTGCTTATTGGCTGATTCAAAATTTATTTCTTTGAGGGATAAACAAAGTTAACCTTGACTTCTTGCTTATGTACTTTTCTCTGTGCATCAGTTCACTGCTGAGTAACTGTCCTTCATGCCACAAGAAGGATGT TCONS_00035544 . 5' 1972 TCONS_00035544 . 5' 1972 EMBV3_27321 TTTCATCACTGGGTGTTTGTGTTTGCTGAGGAGGGTGGAATGGGAAGAGATGGAGTTTTG Gene GeneID:404154|IL4R:NM_001075142:2_cdna Constitutive 0 NULL GeneID:404154 25 GENE IL4R NULL interleukin 4 receptor EMBV3_43242 GTGAGTAGCCACTAAAAACCCTGCCCACTGGTGGTATTGCACCAACCTGTTTAGAGAACA Gene BVT0102_169060 - 1 EMBV3_32952 GK000010.2:54043421-54105428 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014016 TCONS_00014018 TCONS_00017324 TCONS_00014014 TCONS_00014013 TCONS_00014015 TCONS_00014012 2 XLOC_008233 XLOC_009008 Coding TCONS_00014014 XLOC_008233 Coding Coding MNS1 10:53917123-54044830 j TSS10251 3175 1 TCONS_00014014_3 453 13 0.975240004385072 0.0022582236503214 0.00138472632622185 0.000736007923488568 0.000728858137975419 0.000833165478331837 0.000422075774720526 0.000998651393300296 0.00187551853264052 0.00109769858797887 0.000119064217161758 5.47427043888178e-06 4.89764115930053e-05 1.02822708380737e-11 7.82263405560228e-17 0.000962822494690306 7.01026177063339e-13 2.20606779634448e-29 6.47493755108324e-05 0.00135717489044735 0.00202304648519899 0.000585755496639145 1.0911604487908e-05 4.4088562674942e-24 6.79338614706479e-09 0.000752365239800907 0.00142699177951615 2.93103054189416e-08 5.14228124734707e-13 2.1654401698603e-05 4.86592527569066e-05 XM_005211695.1 MNS1 PREDICTED: Bos taurus meiosis-specific nuclear structural 1 (MNS1), 0.0 3256 99.94 0.569133858267717 NM_018365.2 MNS1 Homo sapiens meiosis-specific nuclear structural 1 (MNS1), mRNA. 0.0 1932 88.67 0.470551181102362 TCONS_00014014_3 sp|Q2KIQ2|MNS1_BOVIN MNS1_BOVIN Meiosis-specific nuclear structural protein 1; 0.0 784 98.46 0.997792494481236 1 coding 0 0 1 1 0.0770934747975375 0.774198680281209 0.0300048869238431 0.536951505954472 TTCACATCGCGCCCCGGAGACAGATGCTGCGGGCTTCTCTCTCAGCTTCTATTCTGCCGTTGCTCCGCCCCAGGGTCTGCTCTTCCGCTAGGGAAGCCAGGCTGGGCCCTGTTTCTGGGAAAAGCAGTGGGTGGCTGAACGAACTCAGACCCGACAGGCCCAGAGCTTCCAAGCTTTCCCCGGCCTGGATTTTCAGCCTCCCACCTTCAACCTGACTTCTAGCTTCTGATGGCCATGTCAAGGGGAGCTCTGAAAGTGGCATCTGGAGGAAAAGGGAGCCTCTTGGGCCCTCCAGCAGCTGGTGTCTAAGGAAACTTTCAAGGCACTGTGCCATGCCCTGTGCAGGAGACAGAGGTTCTCAAGAGAGGGGCCTGGCTCTCCTGGACCTTTCACTGAGGCATGGAAAATAGGATGCATGCCCTAATCACCAAGGGAGGGAACCCAAGAGGAAGGCTTCCATAAGGAGAACTTTGAGCTTCAGTGAAAGGCATCAGAAATTAGTAGATATAAACTATTGCAAAAAATTGCATGTCGAGGCACTACAAAGGCTACAGAATCAAACTAGGGACCAAATGGTGCAGAACGAGAATGATGACCGGGCTGAGCGCAAAAGGTTCCTCAGATTATTACAGGATGAACAATTTGAGCTGGATATGGAAGAGGCCATTCAAAAGGCAGAAGAAAACAAAAGATTGAGGGAGCTCCAGCTTGCACAAGAAGAAAAATTGGCTACGGAACTGGCAAAACTAAAACGTGAAAGTCTAAAGGATGAAAAGTTGAGGCAACAAGTAAGAGAAAACAGTGCTGAGCTCAGAGAATTGGAGAAGAAATTAAAAGCAGCTTACATGAATAAAGAAAGAGCAGCTCAAATTGCTGAAAAGGATGCCATTAAATATGAGCAAATGAAACGTGATGCTGAAATAGCCAGAACTATGATGGAAGAGCACGAGAGGTTAATAAAGGAAGAGAGTGCTGCAGAGGACAAACGAAACCAAGCAAAAGCACAGTACAGTCATGACTTAGAGAAACAACTGGAGGAACAAGAGAAGAAAAAGCAGGAAGCTTATGAGCAGCTGCTGAAAGAGAAACTCATGATTGATGAAATTGTTAGGAAAATCTATGAAGAAGATCAATTGGAAAGACAGCAAAGGTTAGAGAAAATGAATACAACTCGAAGGTATATAGAAGAGTTTCAGAAAGAGCAGGCTCTCTGGAGAAAAAAGAAACGGGAGGAGATGGAAGAAGAAAATAGAAAAATAATAGAGTTTGCCAAGTTGCAGCAACAAAGAGAAGAAGATCGAATGGCAAAAGTTCAAGAAAGTGAAGAAAAAAGACTACAGCTTAAAAATATGCTGACTCAGAGGTTGGAAGAAATGCTGCGGCAACGTGAAGATTTAGAACAAGTGCGACAGGAATTATACCAGGAAGAACAAGCTGAAATATATAAGAAGAAACTAGAAGAAGAAGCAGAAGAGAAATTGAGAAAGCAAAAGGAGTTGAAGCAAGATTTTATGGACCAAATGGCCTTGAAGGAATTAATACTTCAGGCGGCAAAAGAGGAAGAGGAGACATTTAGAAAAGCCATGCTGGCAAAATTTGCTGAGGATGATCGAATAGAATTAATGAATGCGCAGAAGCAAAGAATGAAGCAACTAGAACACAAGAGGGCCGTGGAAAAACTTATAGAAGAGCGCCGCAACCAGTTCCTTGCAGACAAACAACGTGAACTGGAGGAATGGCAGTGGCAGCAAAGACGACAAGGATGTATAAATGCAATTGTTGAAGAAGAAAGACTAAAACTTCTCAAAGAACATGCTACAAAACTACTAGGATATCTCCCTAAAGGAGTATTCAAAAATGAGGATGATATTGATATGCTTGGTGAAGAGTTTAGAAAAGCATATCAGAAAAGGAGTGAAATTTGTGAGAAGTGATACCGTCAAGGAACTTCACTTCCTTGATTTGGCTGGGGAAGACTCTTCCTATTATGAGAGGAGAAAAGTACAGAGTGAGGAATTTCAGAGTGCTTTATTACCTAATGCAGTTATCAATAAGAACATAGAAAGTTTCTCTCAGGTAAACATCGTTTACAAACTAAAGCTAAGTCTCTAGAACATATTTTCTATGCATATGCAGCTGAAAGGGGCTAGAAGGTCATAAAAAAGATAAAAGAATCGAAAGTTCAATTTCTGTTGCTTTATTTTATAAAACATTGCTAATAATTAGGTATCAATTTTATATCCCCAAACCTAAATTTACTTTAAGAGTATATCCACCACACACTAGAGGTTTAAAAGTAGATCACTTATTAATTTCCCCATTCAAGTGCCTTCATAAATTCTTCTTCAGTGAAAGACAGCATCTTGGCAGCTTCAATATGCATCTGTGTTTAAAGAAATCAATATTGTCTAAGAGTAGACCACAGAACAATAGGAAATTTGTGAAAGTGCATGTATAATTCTAATTACAGTAAACAGGTTTAAATAGTAATTTCATTCAGTGAGTAGCCACTAAAAACCCTGCCCACTGGTGGTATTGCACCAACCTGTTTAGAGAACAATTCCATGTTGTAATACCTAATCTTTGCAAAAGGTGACAGTAGCAAAAACATGAATTCACATCCTCTTAACCACAAGGCAAACCTGTGTGGTGACCACAATAAAAGTGGTTTGGAATCAGTTTCACTCCAAGATTTCAAGAGGCAAACTGATCCCTTTTTAAGATTATAGTTATTTTTTATATTTGGTATTATTTTCTTTAGTTAGGGAGTATCCATACTGTATGGAAAAAGAACTAGTAAACGTTTCTAATTTACTTGCATCAATGTATAGATAACATTTTGTGACTAAGCATGGCAATAAAAACTATACCTGAAGGAGAAATACTAAATGTCTTAGTAGAAAGAGCCAAATAATATCCAGGATTTATTTTAACTTTGTTTAAGATAAACTCACCTTCTGCCTTTTTAAAACATCAATTAATTTTAACTGTTTCTTAAATCCTATCATTAATTCTCCTTTTTGTTTTTCTAGCTTCTTGTTTTCTGATTTTAATGCTTCGATTTTTTGGTGTTCTTCATTTGCTATATCCTGCAAAAGGAAAAAATCCTATGTATTCTTTACAGTATTTTAATGGAAAAATTATATCAACAATAAAAACTTAGGTTTAAGTTTCA EMBV3_40397 GCATCGGAGGAACCCAGCCGGACGCAGCTAACGCAGTTGCTCCTAAAAATTAGTGTTTGA Gene BVT0102_368718 + 0 NULL GK000016.2:78041753-78094757 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28839 GCTAACAAGTCAACTGCAAACCAACTGAATGTACAACCTTAGTGCTGGTGCTGAAATCTC Gene BVV0101_028081 + 0 NULL GK000003.2:17337506-17432731 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068911 TCONS_00068912 TCONS_00068907 TCONS_00068910 TCONS_00068913 TCONS_00068916 TCONS_00068908 TCONS_00068909 TCONS_00068914 TCONS_00068915 1 XLOC_041820 Coding TCONS_00068916 XLOC_041820 Coding Coding ENAH 16:29236032-29442778 = TSS51497 4770 1 TCONS_00068916_4 570 15 0.977000652978307 0.0084761193612938 0.00624170196764173 0.00624654208484376 0.00660570610084602 0.00820660690687384 0.0037523870779052 0.00519477763368455 0.00670167822637812 0.010764569708194 0.00104680058018059 0.000446238563719492 0.000267683594184088 0.0013407161830729 0.00155851461691578 0.00328485412917973 0.0202806314612809 0.0144011815953225 0.027549362949714 0.00621314419564508 0.00468071605705217 0.00212119348189146 0.00884674649038814 0.00969599633208234 0.0161824906953138 0.0072461517782882 0.00498122321023354 0.00454512864732584 0.00269474084746849 0.00110614180080245 0.00315771723014186 XM_005216863.1 ENAH PREDICTED: Bos taurus enabled homolog (Drosophila) (ENAH), 0.0 8421 100.00 0.978616352201258 NM_001008493.1 ENAH Homo sapiens enabled homolog (Drosophila) (ENAH), transcript 0.0 5631 85.77 0.99979035639413 TCONS_00068916_4 sp|Q03173|ENAH_MOUSE ENAH_MOUSE Protein enabled homolog; 1e-105 340 81.11 0.378947368421053 2 coding 1 1 1 0 -0.253572566463621 0.403031129393915 0.00519940438150454 0.959581413680239 CCCCGCCCCTGGAGGAGAGACCCCCCCCCCCCCCCCTGTTCGGCTCGGCGCCTCCCGCGTCTCCCGGCTGCTGGGGAAGCCTCGGCGCGGCCGGCACCATGAGTGAACAGAGTATCTGTCAGGCAAGAGCTGCCGTGATGGTTTACGATGATGCCAATAAAAAGTGGGTGCCAGCTGGTGGTTCAACTGGGTTCAGCAGAGTTCACATATATCACCATACAGGCAACAACACATTCAGAGTGGTGGGCAGGAAGATTCAGGACCATCAGGTTGTGATAAATTGTGCCATTCCTAAAGGATTGAAGTACAATCAAGCTACACAGACCTTCCACCAATGGCGGGATGCTAGACAGGTGTATGGTCTCAACTTTGGCAGCAAAGAAGATGCCAATGTCTTCGCAAGTGCCATGATGCATGCCTTAGAAGTGTTGAATTCACAGGAAACAGGGCCAACATTGCCTAGGCAAAATTCACAACTACCTGCCCAAGTTCAGAATGGCCCATCACAAGAAGAATTGGAAATTCAAAGAAGGCAACTGCAAGAGCAGCAACGACAAAAGGAGCTGGAGCGGGAAAGGCTGGAGAGAGAAAGAATGGAAAGGGAGAGAATGGAGAGGGAGAGGTTAGAAAGGGAAAGGCTGGAGAGGGAGCGGCTGGAACAGGAGCAGCTGGAGAGAGAGAGACAAGAACGGGAACGTCAGGATCGCCTGGAGCGGGAGAGACAAGAGCGGGAGAGGCTGGAGAGACTGGACCGGGAAAGGCAGGAACGAGAGCGGCAGGAGCAACTAGAGAGGGAGCAGCTGGAGTGGGAGCGAGAGCGGAGAATATCAAATGCCGCTGCCCCTGCCTCTGTGGAGACTCCTCTAAACTCTGTGCTGGGAGACTCCTCTGCTCCTGAGCCAGGCTTGCAGGCAGCCTCTCAGCCGGCCGAGACTCCAGCCCAGCAGGGCATTGTCTTGGGACCACCTGCACCTCCACCCCCTCCTCCACTCCCGCCAGGTCCTGCCCAGGCACCAGCCATACTCCCTCCCCCACCAGGACCCCCTCCACCTCCTCCACTCCCATCCTCAGGGCCTCCGCCCCCGCCTCCTCCACCACCTCTTCCCAATCAAGTACCCCCTCCTCCTCCTCCACCTCCTGCTCCTCCCCTCCCTGCGTCTGGATTTTTTTCGGGATCCATGTCTGAAGACAATCGCCCTTTAACTGGACTTGCAGCTGCAATTGCTGGAGCAAAACTTAGGAAAGTGTCACGGATGGAAGATGCCTCTTTCCCAAGCGGAGGGAACACCACTGGTGTGAATTCGGCCTCATCTAAAACAGATACAGGTCGTGGAAATGGACCCCTTCCTTTAGGGGGTAGTGGTTTAATGGAAGAAATGAGTGCCCTGCTGGCCAGGAGGAGAAGAATTGCTGAAAAGGGATCAACGATAGAAACAGAACAAAAAGAGGACAAAAATGAAGACTCAGAGCCTGTAACTTCTAAGGCCTCTTCAACAACTACACCTGAACCGATAAGAAAACCTTGGGAAAGAACAAATACAATGAATGGCAGCAAGTCACCTGTTATTTCCAGACGGGATTCTCCAAGGAAAAATCAGATTGTTTTTGACAACAGGTCCTATGATTCATTACACAGACCAAAATCTGCGCCTTCGTCACAGCCCAGTGCCAACGGAGTCCAGACGGAGGGACTGGACTATGACAGGCTGAAGCAGGACATTTTAGATGAAATGAGAAAAGAATTAACTAAGCTAAAAGAAGAGCTCATTGATGCAATCAGGCAGGAACTGAGCAAGTCAAATACTGCGTAGAGAAACAAACTAAGGAGAGACAGGACTTTTCATCTGGAAAAAGAAGAAAATAAAAACCTGCGAAGAACAACTGTTAGCAACAACAAAACCCTTACATTTTGTGAGCTGTAAGAAGAAAACGGAGATACACAGTCGGAAGGAGGGGAAAACCAACATACTTTGAAAGCCTTCAAACATTACTACTCCGGCGGATAAGCTATTTCCCTCCCAGTTTGCTGCTTTTTTCTGACCTTTACAACAGGATGGAAGAGAGTCGTATAGGAGTTCCTATATCAGTTATGCAGAAAATAACTAAACCCGTCAGGCAAGATCACCGTACATTGAAAATATTTTCATGTCAAGAGACAATTGCACATTTTCCACAGTCCATTGCTAAAATAAAGAGGAGAAAGGCTTGAGAAGGTTTTTTTCCAGAGAATGCTGATGAAGAATTTAGCAAGTGATGCTATTGTATTGTAAATGTTTCTCTCAGGTTTGTCTTCCTATCATATTTGATATTCCATGGATAATTGAGATCAGCCCTGTGTAGGTTAAGATCATAAAATGTGGAACAAATGTAATTGTATGTGCTTTCAAAAGGTGACATTTATAAGAAAGTGTCCTAAAAATGATTTGTCCAGAGAGGAATTTTAGAATGATAGGAGGTCTCTCGAGTTTAGCCTTCATGCAATTTTGTAGATTCAAACATAAAATTCATCCAGAATTTAAAGATTTAGATGCCTTCCTAAATTGTTACAATGCTTTACCAAATCTATGACTCCTACATAACAACCAGTGGTCAAATGTAAAACAATATATTGTAGATTTACTGTAGGTTTTCAACCTTTTTTAGATTTATGCATGTGGACATTTTTATAACGTAATTACAACCACCACAAAAATTAGCTTTTTTAATTGCAGACAGTAATGCATGTTAAACTAATATGTAGTGGCCTTTTCAAGGCCTAGTCCCAGGGAAAACATTTTGTAGAGTATAGGGAGTGGGAGGCGGGGAAGGAATAACTTTTTATTTAAAGTTAATTTCTGCACTATCTTTTTTCTCAGTTATCTGCATGAATAATGATGAGGAATATTTTGTGACTTTAATTGGTAAATATGTTAACAGAACCGAGTACTTAATCTTTTACATCATGTCTTCAGCTATTTGTATTTTAATTCAGTAACTTCAATGGTCTGAAACATGATTCTGAGCTTCACGTGAATTCTGTCTTACTGTGGAATTCAAACGTTCGTCCCTGAATCTGACAGTTGTTATTACCTAGGTGCCCTGTAGTTATCCAGGTGTCAGGTACACATTCCTGACTTCAGAGCTGCTTTCGGACTTTTACGTTGAAATACTAGAAAAGTAACAACGATGGCAGCAATTAAGGTCACAGAAATCATCAGATAAAGGGAAAAACGACGAGGGGTCCTGCATAATTTTCTTTTAATAAATAGAGAGGTGGTAGGAAGAAGGAACTAGATGCCCTACTTACCACCATGTACGTGTGCGTGTTTGTGTGGGCACTCACGTGTGTGTGTGTGTGTGTGTGTGTGTGCAATGCACTCCCTTTTCTTTGAAACTTCTGAGATTAAAATAGGGGAGCAATCCTGTATGTTACAATGATAGCATTTTTTGGAAATCTAGGAAATCAAAAATTCTCCAGGCTCTCCATCTTGGTTTATGCTTGAGTTGTTATGTGCCATATTTGCTTTGAAATCTTTGATTATCTGTAGTTTTACTAAAATTTTGAAGAAATAATCCACTGTTGTCTGCTTTCTGGATTTCTTAATCTTCCTTCATAAGACAGAGCTTGTTGATAGCATAGTTTTCTAAATGCAGGTTTGCGGCCATCACCACTTCAAAGAGGTTTGAATGAGGAAATTTTTTTTTCCCCGTATTAAAACAGTTCTTGTTTCTGTAGAAACTTCATTTTTAGATTAATCTGTGATGGATGAGCTATCATAATTCTACTATGCGGTTCTTTTTCTATCAGATATTGTCATCCACCAGTAAAGACATTAAAGATGCAGCAAGCTTATAAAGTACTACTTTCTTAAAGAAATAGGAGGCATTCCCATCTTTATTACCGTACTTTTGGTTATGCAAACACTTTGGAGATATAAATGTTTATGTCCCCCATAAATCTGGTCAGAAATCATTTTTGATTTTGTTGATTAAGTTAAACAGTAGGATAGAGTACTGGGTATAAGTGGTCCAAAGTAAGATAAAAGACTACGCTAAAAATGCTAGATCTTGAAGAAGAAACTGGTTTATGCACTAAACGTTTTGTGCCTTGGTCTAAATATTAACATGTCTATGTAAAATGACAAAAAGAACCAGTGTTGAATCACATTTTATTTCCTGTCGTTCTGCTTTATCCCAGACTGCTAAATGTGTTCTTTCCAAGAAGTTTGATTGAATTACTGTACACATTTACTGTCCTGTGTGACAGTTTTGTCATTGTTAGAGATTTCAGTAATTAAAACGGGAAACAGAAGCTTAGGTTATTTTCCTTATCAAAACTATGTTCCTTGGAGCCACGTTATTATGATGGTTTTCGTGCTCTTGTACATTGGATGTCTTAAGCTGAGTGCAGTTTAGGGGATCCTTTCTAATTACAGGAAGGTACTTCTTTCCTTTAACACTGTGATCTGACCTGTGACAAATCTGTACTACACACTATGTAAATGGCTAACAAGTCAACTGCAAACCAACTGAATGTACAACCTTAGTGCTGGTGCTGAAATCTCTTCAGAATAGTCATCATGATCTCAAAGTTTGTTTCAGAATTTGCAAGCATCAAGTGTCAATCAGAACTGAAGATGAAACACTAATGAATGTTGAATCCTCATGCTCTAGGTGTACTTCCTTTGTAGAATTTTTGTTTCTCTGCTATTTTTACCATACTGTTCCATTTAAATTTCCTACACGCTAACTTCGTTTGTGCGATTGAAATAAAATTGCAGTATATACATG EMBV3_19567 ACCCAGTTGTGGGACCTTACTGGCTTCTCCTGTGAAGACCTCATCCCCTGTGTCTTAAGT Gene GeneID:505200|CCNF:NM_001098870:66_cdna UTR3_Alt 2 NULL GeneID:505200 25 GENE CCNF MGC157179 cyclin F EMBV3_22189 TCTGCAAGCCAAGGAAGGGGCCTCATAAGAAACCAACCCTGTCAACACCTTCATCGTGGA Gene BVV0101_021831 + 0 NULL GK000011.2:14590468-14683782 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16133 GGGTGCGCCCTGTGTATTCCGGGTTTTGTTCTTAGAGGACACGGAACATGAAGGACAAGA Gene GeneID:615435|APLNR:NM_001102524:28_cdna Constitutive 0 NULL GeneID:615435 15 GENE APLNR AGTRL1 MGC152407 apelin receptor EMBV3_34778 CCAGGCGCTCAGCGAACACTTAAAGAACCCTGTGATAGCACAGAAGATCCAGAAGCTGAT Gene GeneID:617109|STIP1:NM_001035492:122_cdna Constitutive 0 NULL GeneID:617109 29 GENE STIP1 MGC128110 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) EMBV3_03489 CTCACCCACAGCTCAACAAGTCGCAGTCCCTGACCAATGCCTTCAGCTTCTCTGAATCTT Gene GeneID:782758|SYN2:XM_002697133:71_cdna Constitutive 0 NULL GeneID:782758 22 GENE SYN2 NULL synapsin II EMBV3_29331 GACATACCAAGTATACAGTCTGGCCTTGGAAGAACACACCCCAGTGACCATTGTACCACC Gene GeneID:513051|MUTYH:XM_002686424:391_cdna Constitutive 1 NULL GeneID:513051 3 GENE MUTYH MGC128714 mutY homolog (E. coli) EMBV3_30535 ATGTGCTTGAATCATCCCAAAACCATTCCCCCTACCTCTGGTCCTGGGTCCGCTGCTATA Gene GeneID:524111|ZNF227:NM_001077960:277_cdna Constitutive 0 NULL GeneID:524111 18 GENE ZNF227 NULL zinc finger protein 227 EMBV3_39682 GCGTCCTGGACTCTGTTCCATCAACTTACAGAACTGCCAACACCATCCCAATTCTCCTTT Gene GeneID:282002|PRKCG:NM_001166502:121_cdna Constitutive 0 NULL GeneID:282002 18 GENE PRKCG NULL protein kinase C, gamma EMBV3_01447 CCGACGCTCTTTCAAACCGACAAGGACGAGGGGCGGGAGTTCGATTGGTCGGTGCCCTAT Gene GeneID:520692|LOC520692:XR_084616:925_cdna Constitutive 0 NULL GeneID:520692 18 PSEUDO LOC520692 NULL similar to L-amino-acid oxidase precursor (LAAO) (LAO) (Interleukin-4-induced protein 1) (IL4-induced protein 1) (Protein Fig-1) (hFIG1) EMBV3_42834 GTTGCATGGCAGTTTGTTAAGGTAATATCATGTGTATATTTTGTCAATATTATGTCCATC Gene GeneID:783685|GPR22:XM_002686777:87_cdna Constitutive 0 NULL GeneID:783685 4 GENE GPR22 NULL G protein-coupled receptor 22 EMBV3_22620 TCTCTGGGCTTCTATTTCGACCACGACGATGTGGCCCTGGAGGGTGTAGGTCACTTTTTT Gene GeneID:783224|LOC783224:XM_002685056:153_cdna Constitutive 0 NULL GeneID:783224 1 GENE LOC783224 NULL similar to ferritin L subunit EMBV3_37428 GGACAAAGTCCTGATGAGAAACCTCTTCACTGGACACTTCCACACACCAAAACATCAGCG Gene GeneID:786759|TRIP11:XM_002696752:398_cdna UTR3_Alt 2 NULL GeneID:786759 21 GENE TRIP11 NULL thyroid hormone receptor interactor 11 EMBV3_39137 GGGAGCCGGGCAGCCCGCGGCTCACCGAGGTGTCCCCGGAGCTGAAGGATCGCAAAGAGG Variant GeneID:525900|SHOX2:XM_002684959:228_cdna 347^427 1 EMBV3_39142 GeneID:525900 1 GENE SHOX2 NULL short stature homeobox 2 EMBV3_00831 CAGGCTACTGGAATAGAGGATGGAGAGTTAAGGAGAACATTGCAGTCATTGGCTTGTGGC Gene GeneID:539668|CUL4B:XM_002699510:100_cdna UTR3_Alt 2 NULL GeneID:539668 X GENE CUL4B NULL cullin 4B EMBV3_24865 TGCAGCTTATAGCTGTTGTCACTTTCTAATGTGTTATAATTGACCTTGCATGGTGTGAAA Gene GeneID:785768|RANBP2:XM_002691336:502_cdna Constitutive 2 NULL GeneID:785768 11 GENE RANBP2 NULL RAN binding protein 2 EMBV3_35137 TCCCAAATGATAGCTGGACCACCCCACAACGAGTATATGGAACAGAGTTTCCAGGGCTTG Gene GeneID:493989|XYLT2:NM_001008667:50_cdna Constitutive 0 NULL GeneID:493989 19 GENE XYLT2 NULL xylosyltransferase II EMBV3_35289 CATGACCATGACATACGCACGGCCGTAAAAGGAGGCTGCGGGATTCTATACAGTCTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42441 TGTTGGAACTGTGTATGTATCCCTGCTGAGGGAGGAAGCCACTTGGGGAGGGGGAATTAA Gene BVV0102_157829 + 0 NULL GK000010.2:55017779-55031447 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04460 AAGGGTGAATCGGGAGGACCCTGACGCAGAGGAACTGAAGGAGTTGACATACACTGACTT Gene GeneID:282860|KIR2DL5A:NM_174740:127_cdna Constitutive 0 NULL GeneID:282860 18 GENE KIR2DL5A KIR2DL1 KIR2DL4 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 5A EMBV3_26483 GGGAAATTCTTGCACTGTATCCAAGTTTTTTGATCTGGTGCGTGTGGCCCTGTGGGAGTC Gene GeneID:281777|GAP43:NM_203358:29_cdna Constitutive 0 NULL GeneID:281777 1 GENE GAP43 MGC140756 growth associated protein 43 EMBV3_40498 TAATTCCCCATTTTTGGTCTGTCTGGCCTCTGCCTCATGCATCTGCGAAGCAGCTCTGCG Gene GeneID:511061|SLC30A2:XM_002685704:380_cdna Constitutive 1 NULL GeneID:511061 2 GENE SLC30A2 NULL solute carrier family 30 (zinc transporter), member 2 EMBV3_34322 AGCGGCCTCGCTTCTCACAGATCGTCAGTGTCCTGGATTCTCTCATCCACAGCCCTGAGA Gene GeneID:517368|EPHA8:XM_002685783:622_cdna Constitutive 0 NULL GeneID:517368 2 GENE EPHA8 NULL EPH receptor A8 EMBV3_20585 AGTTCTCCGGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATGCCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08898 CTACGAAGTGAACTTTGATGACGGATCCTACAGCGACAACCTGTATCCAGAGAGCATCAC Gene GeneID:508141|KDM4B:XM_002688920:88_cdna UTR3_Alt 2 NULL GeneID:508141 7 GENE KDM4B JMJD2B lysine (K)-specific demethylase 4B EMBV3_02246 TTTCACACGACTTGGACAGATCTACCAGTCCTGGCGGTGGGGTCAAGCCCGCAGAGGGAT Variant GeneID:100125922|RER1:NM_001105492:2_cdna 124^876 1 EMBV3_02432 GeneID:100125922 16 GENE RER1 MGC159658 MGC179436 RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) EMBV3_09532 CAGTCAGAATGCAGGGCTTTTCCAGCATCTCCGAATCCACACTGGTGAGAAACCCTATCA Gene GeneID:518176|ZNF323:NM_001046237:25_cdna Constitutive 0 NULL GeneID:518176 23 GENE ZNF323 MGC138002 zinc finger protein 323 EMBV3_42111 AAGGCAAGATAGCATGGTCTGGGGGTAATACATCATCAGCCCTTCACCCAGTATGACTCC Gene GeneID:317724|USO1:NM_174845:32_cdna Constitutive 0 NULL GeneID:317724 6 GENE USO1 MGC128739 VDP USO1 homolog, vesicle docking protein (yeast) EMBV3_31043 ATTGGTAGGGTGGTCAACGGAGCCTTCATGGTGCTGAAAGGGCATCGGTCTATTGTTAAC Gene GeneID:785849|DCAF5:XM_002691041:429_cdna UTR3_Alt 2 NULL GeneID:785849 10 GENE DCAF5 WDR22 DDB1 and CUL4 associated factor 5 EMBV3_09741 TCCTCAACCCTCCATCCCCATCATGGGCATCATTGTTGGACTGGTTCACCTCATGGTCAC Gene GeneID:533050|BoLA:NM_001114855:156_cdna Constitutive 0 NULL GeneID:533050 23 GENE BoLA HD15 MGC142969 major histocompatibility complex, class I, A EMBV3_02763 CCTGCTGCATCGTAAGTAAGCTAAACTTGTTCATTAGTATCTGCTTAAATCCATTTGCAG Gene GeneID:100139620|BHLHB9:XM_002699792:6_cdna Constitutive 0 NULL GeneID:100139620 X GENE BHLHB9 NULL basic helix-loop-helix domain containing, class B, 9 EMBV3_28972 ACAAAATCCTTGTCGAGGGACTGCTTTTGTTGTGAGTTGGAGGGGAACCAAACTGTCGGC Gene GeneID:789410|XRCC2:NM_001102354:766_cdna UTR3_Alt 1 NULL GeneID:789410 4 GENE XRCC2 MGC160004 X-ray repair complementing defective repair in Chinese hamster cells 2 EMBV3_30954 GTCATGTCCGAGGCGATAAAGCCTGATGTTGTCGTGTCTGAGCAGCACTGTGTTGTAGAT Gene GeneID:100336960|LOC100336960:XM_002687265:145_cdna Constitutive 0 NULL GeneID:100336960 5 GENE LOC100336960 NULL hypothetical protein LOC100336960 EMBV3_17559 GCGCATTCCCACGGCTGCACTTTGCTCAGACTGAGATGTGAATGGTTAGGGTTTTGCTAA Gene GeneID:614701|SLC22A23:NM_001076341:2_cdna Constitutive 0 NULL GeneID:614701 23 GENE SLC22A23 MGC138947 solute carrier family 22, member 23 EMBV3_00441 TGGGTTCAATCCCTGGTTGGGGAACTAAAATCTCACAAGCTAAGTGGCATGGCCAAAACC Gene BVT0102_183912 + 0 NULL GK000026.2:537420-663447 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096449 TCONS_00096446 TCONS_00149888 TCONS_00096452 TCONS_00096447 TCONS_00096448 TCONS_00096453 2 XLOC_057973 XLOC_091760 Coding TCONS_00096449 XLOC_057973 NonCoding Coding - 19:34565551-34586383 - TSS71672 1724 1 TCONS_00096449_2 94 0.230278422273782 3 0.917382746867649 0.00461494249829276 0.00300987905509246 0.00412702819078064 0.00190546705405221 0.0014936156690703 0.00094274627539022 0.0010140822222499 0.0017797401152328 0.0040229358098656 1.01731123555819e-31 0 0 1.06230073666291e-13 3.80620239023171e-05 2.14638692034989e-07 1.52564327541723e-05 0 0 0.00149192854837562 0.00245788206516299 0.000862395409209179 0.000105435574242769 0 0 0.00131880803622182 0.00174046898498967 0.00231347334076234 0 0 0 XR_238694.1 LOC101902723 PREDICTED: Bos taurus uncharacterized LOC101902723 (LOC101902723), 0.0 1195 100.00 0.383410672853828 0 noncoding 1 1 1 1 -0.219540358756908 0.325900381797544 -0.0169511194286721 0.735142976326264 CTCGCCCACCAGTTCCCCGAGCCGCACAGCGAGTGCAGTGTTCTGCGGATACCTGGGCAAGGTCGAGCTGTCTCGCCTCATAGTAAAGTGTCTCCCATCCACCATGGATTGAAATTATACCTTCTTTGAAGACCTGCATTTTGGAGAATTCCCTAATGGTCCAGTGATTAGGACTCTGCCCTTTCACTACAGAAGCATGGGTTCAATCCCTGGTTGGGGAACTAAAATCTCACAAGCTAAGTGGCATGGCCAAAACCAAGAAACCACCATGACATCCCTGCTTTTTTATTGGTGAAGTCGTGGACAGCTGCCTGTCTCCTGCATTTCATCAAGGCCTTCAAAGATCTGTCCATCCTGGAGAAAGAAGCACCGGCTGGGGCCATCCTGCTGGACCTCATCCCACCCAAGAGCCAGACTGCGCAGCTGATCAGAGCGGCCCCTGCCATGACGTCCTGACGGGGACCCAGCTGATTGTGTAGGGCAGGGCTGCTGCAGTTTTGGCCGTTGCTATCCTCGCAGTGGGAATTTTAATAAGACTCTTCACTGACCGTGGCTGAAATGGAATCATCCCAGCCCCAAACTACCAGTGAGAACGCTATGCCACACGTGCAGCATGGGAGGCGAGCTCTTTGCCTGGACCGTGGCTTCGGCCCCAGACAAGCAGGGAGAGGATGCCAGCTTCATGTTCTTACTTTGAGGATTCACACTATCGTTCTGGACATCAAGAAAAGCGTTACAATTTTATGTGCACTTTTCTCCCAAACGTTAACTCTTACCGTGGTTTTTAAGTCTGCACATTTGGTGTCCTGGCTGGCTGTGTTCCTTATCCCACCTTACATTTAATACCTTCTGTCTTCCAGGAGAGCAGGTCCTCCAACAGTAACTGCTGGCCACGGTGTGTTTGTGGCCCTCTTGTGCATCCAGCCTCGTGTGTGAGTGTGCATGAAGTCCTGTCTTGGGCAGTGCCATGCAAGCTTTTATAAAATAAACATTTTAAAATATGTGCTCAGACTATTTCTAAGTGCTAACTTGTAGCTTACTGCCTTTTAAGAAATTTGTTAAACTTTTGTATTAATTAAAAGATGACTCTTGTGTTCTGTCCTGCTGCTGAGCTCCCAGGTGCTGGCAGGTATGGCCCCGGCGCCTGCTGGAGGTTTTTAGAGCCTTTAATAGGGAATCTGACCAACCAAACAGAAAGTCCTAAAAATGACTGACACTGGCACTTCCCCAGCATGAAGCCCACTGCTGACCTAGAGAGCAGTCCTCCCCGGGGCCACGCACCTGCCCCCCTCACCCCACCGGAGGAGAGAGGCAGGAGAACCCCGATACGTCACCTGCAGGCTGCAGACTATGACGCAGCAGGACAGACAAAGTTCTGAGGTCAAATTCACATAACAGGAAAGTAACCTTCACGTGTATAATTCAGCGACATTAGCCAGTGCGTCTGTGGTCTTTATTATTATGCCACCCAGTACAGTGTGCAGTATCTCACTGCTACTTTATTACAGTTTCACTGCACGTCACTAATGACATCCCTCAGCTTCTTGCAGGGTTACTGCCCGGCTCTGATGGTTTGGAGACATGTGCCCATTCATCTATGGGCTTGTCTTTCTGCTGTGGGACATACCCTCTGGGTACTGGGCCCCTATCAGATGTATGGTTTGCAGTATTCTCCCCATCTCCCAATTCTGCCAGCTTTCTATGCACTTTCTTGACAGTGTCTA TCONS_00096450 s 5' 0 TCONS_00096450 s 5' 0 EMBV3_18905 GATGTGTCTGCTACAGTCATTCAGCGTGCTTACAGACGTTACCGCCTACGGCAAAATGTC Gene GeneID:533065|SCN9A:NM_001110787:112_cdna Constitutive 0 NULL GeneID:533065 2 GENE SCN9A NULL sodium channel, voltage-gated, type IX, alpha subunit EMBV3_40576 GGGAGCCGGGAACCATTTCCAAAGCAAGTAAGCTTCAAGAGGCAAAAAAGCACGTCGTCC Gene BVV0102_215067 - 0 NULL GK000011.2:28666834-28771283 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027402 TCONS_00027405 TCONS_00027401 TCONS_00027403 TCONS_00024508 TCONS_00027404 TCONS_00027406 TCONS_00027400 TCONS_00027407 2 XLOC_015241 XLOC_014525 Coding TCONS_00027407 XLOC_015241 NonCoding NonCoding LOC100848599 11:28755683-28756144 j TSS19422 349 1 TCONS_00027407_1 41 2 0.245652173913044 0.0152269870544594 0.0114473767868187 0.0266883382598263 0.00691770192155023 0.00774106197867122 0.0008527730258349 0.00163098231630996 0.00207227433839659 0.00114632765389329 0.000294632548537001 0 0 0.000121108940334795 0.0032506763981843 0.000460289586434068 0 0 0 0.0100630654541906 0.0222215392513106 0.00720762774350684 0 5.25734053038212e-05 0.000288217080577875 0.0177679493099171 0.0207086401416836 0.00915533252424433 0 0 0 0 noncoding 0 0 0 0 -0.0280218526532915 0.853554086441044 -0.0031742353287916 0.94739927363546 CGGGATAGGTTCTGGTGTTGATCCCCGTGAAAAGGAGCCTTTTTGAAAGGGTGTTTCAGGGGGAGCATGGCAGCAAGTGGTTAAAGGGCAGGTCCTCTAAAACTCTCCTTTGAATGGGGAAAACACTGTGGAAAATGAACTTCCTATAAAGCAGGCACAGCCCTCAAAGTCTCCGTGACTCAGGACGACGTGCTTTTTTGCCTCTTGAAGCTTACTTGCTTTGGAAATGGTTCCCGGCTCCCTGGCCACCTCCACAGCTGACCGGAAGCTTCTCTTGGGTCACAATTCCTCCTCCTCACAGGTCTGCACACTCCCAACAGGGCCGATGCGGCCTACCCACATCTCCTCC EMBV3_08159 CAGGCCATCGATGATGATTGTAACCAAACAGGGCGTGGACCTGACCTCCAAGCTCTCCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19801 TGGGCCACTTCCTTGACTGATCCTCGGGATTCCTTCCCTCATCTATGCAGACTTCACCAA Gene GeneID:520665|FRMPD2:XM_002698949:59_cdna Constitutive 0 NULL GeneID:520665 28 GENE FRMPD2 NULL FERM and PDZ domain containing 2 EMBV3_31392 GTCCTTTGGGGACCCCAAGGAGAGAGTCAGTCCAAAGGCATCTACTACGTGCAGCTGGAA Variant GeneID:526256|MGAT4B:NM_001103261:28_cdna 761^812 2 EMBV3_27277 GeneID:526256 7 GENE MGAT4B MGC152320 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B EMBV3_07202 GAGCCTACGGCTTTGGGACACTTGAAAACTTATCAGAGTGAACACTCCATAGCATTGGGT Gene GeneID:533008|LOC533008:XM_002692963:96_cdna Constitutive 2 NULL GeneID:533008 15 GENE LOC533008 NULL similar to solute carrier family 35, member F2 EMBV3_20209 TTCAGCATTCTCATCCGGCCCCTGTTTGAGTCCTTCAACGGGATGGTGTCTACAGCAAGC Gene GeneID:788534|MLXIPL:XM_002698186:709_cdna Constitutive 0 NULL GeneID:788534 25 GENE MLXIPL NULL MLX interacting protein-like EMBV3_20535 TCCTAATGAAATTGACCACTACTTCTGTGAGGTCCCTGCGGTCCTGAAGCTGGCCTGTGA Gene GeneID:527217|LOC527217:XM_002686521:705_cdna Constitutive 0 NULL GeneID:527217 3 GENE LOC527217 NULL similar to olfactory receptor Olr856 EMBV3_03571 TGATGGCCTCTGTGGAGACTGTGATGGGCGCAGGCAGTGCCCACTGGGTGGATTATCCCA Gene BVT0102_185270 - 1 EMBV3_07196 GK000019.2:35943736-35955795 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22960 CTGACTTTTCCCCAACTCTTCTGGTCCTGGTGGCTTGTTAGTTCCACGTTCCTTACCAGG Gene BVT0102_394923 - 1 EMBV3_09480 GK000014.2:39348349-39354350 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00056109 1 XLOC_033913 NonCoding TCONS_00056109 XLOC_033913 NonCoding NonCoding - 14:39352910-39354158 - TSS41786 1248 1 TCONS_00056109_4 122 0.0705128205128205 1 0 5.45098882486471e-05 0 0 0 0 0 0 2.36968003826854e-05 0 0.000263749377786737 1.83428311410389e-06 2.86513163327521e-06 0.000278191655156813 0.000511358186123868 2.751874121851e-05 0 0 2.01048759792202e-05 0.000873381814856371 1.15247378940413e-05 0.000400142073683094 0 0 0.0001477652291578 0 3.38723652073908e-05 4.69483531390045e-06 0 0 0 XR_238555.1 LOC101901949 PREDICTED: Bos taurus uncharacterized LOC101901949 (LOC101901949), 7e-112 408 79.07 0.380608974358974 0 noncoding TCTTGGGCTTCTGTAATATTTCATAAATTGGTATATTTCAATTATAATAAAACATTATATTTCAACTTATTTTTTAGGGTTGCCTTCACTATGTGTTAGGGGAAGCATACTGGCTGAAACTGCCCACCCTGGCCAGGCACTATAGTAACCATTTGTGTGAGCTGTTTTATGACACGAGGTCCTGGTAAGGAACGTGGAACTAACAAGCCACCACGACCAGAAGAGTTGGGGAAAAGTCAGGAGACACCACATGTCTGACCACTTCCCAGAGTCCTTCTTCCTGGCATCCATCTTCCTTGAGCAATGCCTGAGCCACCAGGAAGGACCTTGAGTCAGAATGATTGGCCAAAGACAACCTGGAAATTTATCCTATCACCTTAAAACCCCAGACTGTGAGCCACATGGCAGAGCAGTTCTGGGTTTCCTTACCCTACTGCTCTCCACCCAGATGCCCCTACCCAATCATCTTTTGCTTTCCCAGTTCATGCGTGTCCTCGCGCAATTCATTTGAGTGTTAGACAAGCGCCCTCTCTCCTAACTTGGAAGGGATTCTACTTCCTGCAACATAAAGCGCTGTGGATTCCCAGTTTTATTCAGTATCTTTATAGCCTCAGCTTCCGAGTTAGTCCTGGCAATAGGCAAGGCACTCAATACCTCTTTAACAAATAATAAACTATCCGGTACACGAATAAGAATGATTTCAGAAAACAAATTTGACAAGTATCAACAATGAGCAAATTCTACTTATCTTCTACCAACTCATTGGTTGGATCAAATTACCATTCATTTTTGTGCAAACGTGTAATGTATTATTCCTCTGTGCCAATAGATTAGAAACATTTTCCATAAAGAAAATGTTTAAGGGAGCCTAGAAAATGACACCCAGGAGAATGAAACATTTAACTCGGGCTTCCAGGATTTGTCCTTTGAGCATGGCTCTCCCCTCTATCCTTCCACACTGTTATAAAGAGGCCAAGACTCTAGCCTGCCTGGCATCTCCGTCCACGCCTAGAGAATCCCAGGGACAGAGAAACCTGGCAGGTTACAGCCCATGGGGTCGCAAAGAGTCGGACACGACTAAGCGACCAACACACACACACACACTCCCTTCAGTTCTTCCACACTGTTATAAAGACACACACACACACACACACACACACTCCCTTCAGTTCTTCCACACTGTTATAAAGACACACACACACACACACACACACACTCCCTTCAGTTCTTCCACACTGTTATAAAGAC TCONS_00051775 . 5' 76 TCONS_00051775 . 5' 76 EMBV3_17879 CCGGCAAGTTCAAAGTGAGCGGCAAAGTTCTGCTTGGCCAGAAGCTGGAGAGAGTTTTCA Gene GeneID:505971|C13H20orf79:NM_001040507:16_cdna Constitutive 0 NULL GeneID:505971 13 GENE C13H20orf79 C20orf79 MGC133481 chromosome 20 open reading frame 79 ortholog EMBV3_39023 ACGACACTCCCTGGACAGTTCCTGAGGTATGACTCTCATTCAGGGGTCTTTGTGAGCACT Gene GeneID:521950|LOC521950:XM_002692767:130_cdna Constitutive 0 NULL GeneID:521950 14 GENE LOC521950 NULL similar to rCG60008 EMBV3_34003 CCAAAGCATCTAAGAGACACACTGCAATTCGACATTTATAAACAATGGATGCAGGCATAC Gene GeneID:511081|COMMD2:NM_001105356:29_cdna Constitutive 0 NULL GeneID:511081 1 GENE COMMD2 NULL COMM domain containing 2 EMBV3_21666 GTTTCGAGTGGGACAAGGATTGATAGAAAGGGCATCTATGTACTTCAGGACAACAAATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34998 AATAGGTCATCTCTTGGCCCGGAAAATCTGTCAATTCCTCCCTGGAGCCTGGGCGACTTT Gene GeneID:512506|RANGRF:NM_001037460:18_cdna Constitutive 4 NULL GeneID:512506 19 GENE RANGRF MGC133973 RANGNRF RAN guanine nucleotide release factor EMBV3_18974 GAACTTGACCCTGGCCTATTTGCTTCTGCCTCTGGGGTTTGTGATCCTTCTGGGTGGAAT Gene GeneID:614257|LOC614257:XM_002689632:35_cdna Constitutive 0 NULL GeneID:614257 8 GENE LOC614257 NULL similar to Chromosome 9 open reading frame 71 EMBV3_34010 CCACCCCCTTCTCATTCCACAACGAACAGCCTGTGGACATCTGGGCCCACCAGTCCCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42062 TCCCGGCCCGTAGTGTGGCAGCAGCTTCAGCCCAGGAGTTAAAGTCACTGTTTGAAAAAA Variant GeneID:533861|MAPKAP1:NM_001081603:35_cdna 231^648 1 EMBV3_14734 GeneID:533861 11 GENE MAPKAP1 MGC154984 mitogen-activated protein kinase associated protein 1 EMBV3_14607 CCCTTAGGAAAAATAGGTGCCCCTCTAGTCCAAAGCTATTTTTCTCTTGGCTTTGGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08681 TCATGAGAGTACTAACCATGGCTTTTCCCCTGTACACTTCTCGTTCCCTCCTATTCCGAA Gene BVV0102_052043 - 1 EMBV3_40161 GK000005.2:46333944-46719642 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18568 GCGATGAAAACAGGCTTCTAACCAAGTCATCTAAGAGGTCAGCAAGCAAACCGAAGGAGG Gene GeneID:515866|GOLT1B:NM_001046215:31_cdna Constitutive 2 NULL GeneID:515866 5 GENE GOLT1B MGC134250 golgi transport 1 homolog B (S. cerevisiae) EMBV3_32051 GTGCCTATGACATGGTTCTGGTGGAAGATGAAGAAGTGAACAGAATGCATGAAAGCCTTC Gene GeneID:516262|GNAT3:NM_001109982:11_cdna Constitutive 0 NULL GeneID:516262 4 GENE GNAT3 NULL guanine nucleotide binding protein, alpha transducing 3 EMBV3_32890 CAGGGATGATTATTATGGATGATGTGGAGGTGCCTAAACAATGCCCGCTATGGCATCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36666 ATGCAGGCACTTTTTCACCTTATGAGCACGTTGTCCCTCACATTACTGATGCTGTCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06956 GAAAAGTTCTTGTCCATGGGAATGCGGGGATCTCCAGGAGTGCTGCCTTTGTTATTGCAT Gene GeneID:616825|STYX:XM_002690461:355_cdna Constitutive 3 NULL GeneID:616825 10 GENE STYX NULL serine/threonine/tyrosine interacting protein EMBV3_06750 GAAAAGTTCCAACAGGCCATCGACGCCCGAGAAGACTTTGTCAGCTGTGCCTTTGTGGTT Gene GeneID:517658|CASP14:XM_002688565:229_cdna Constitutive 0 NULL GeneID:517658 7 GENE CASP14 NULL caspase 14, apoptosis-related cysteine peptidase EMBV3_30613 ATGCTCAACATGACCCTCTGCTGACTGGAGTATCTTCAAGTACAAATCCCTTCAGGCCCC Gene GeneID:287018|GNG5:NM_174811:17_cdna Constitutive 0 NULL GeneID:287018 3 GENE GNG5 NULL guanine nucleotide binding protein (G protein), gamma 5 EMBV3_31705 CGCATAAGCCAAACTATTGGTTCCACATCCCCAGTGACATCTCGACACAGAGTAACACGG Gene GeneID:537755|DSG4:XM_002697688:199_cdna Constitutive 0 NULL GeneID:537755 24 GENE DSG4 NULL desmoglein 4 EMBV3_35794 GATGTAATCATGGAGTTACGCGACCCGTCAAGATATAGGAAAAGTGTGGTCAAGGTTCGG Gene BVV0102_024726 + 0 NULL GK000017.2:32889850-33496004 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075210 TCONS_00075209 1 XLOC_046515 Coding TCONS_00075210 XLOC_046515 Coding Coding ANKRD50 17:33493845-33534821 j TSS56765 8212 1 TCONS_00075210_4 1440 0.0330004870920604 5 0.799707138499085 1.39800658412376e-05 2.38975960606300e-11 1.10649843226551e-05 1.47223431133731e-11 4.40076818127498e-06 2.08953079869166e-06 9.67616406216054e-12 9.19411401945501e-12 7.69999517737219e-05 0.000174685232234674 0.000108112766374351 9.08128992620566e-05 1.43759293000384e-08 6.57365526328249e-09 9.66567229384651e-11 0.000852380821915204 1.49693399335245e-05 0.000804192176748636 1.15771490961266e-11 1.5609321748124e-11 8.40962599174397e-07 0.000127692329019694 0.000639828965409115 0.000355746530871561 1.09189258589862e-11 4.14123450955885e-06 1.44634590644043e-06 7.30819068124702e-05 7.22192958467186e-05 3.2936904873086e-05 XM_005217603.1 ANKRD50 PREDICTED: Bos taurus ankyrin repeat domain 50 (ANKRD50), 0.0 1.452e+04 100.00 0.980150998538724 NM_020337.2 ANKRD50 Homo sapiens ankyrin repeat domain 50 (ANKRD50), transcript variant 0.0 9263 85.92 0.972479298587433 TCONS_00075210_4 sp|Q9ULJ7|ANR50_HUMAN ANR50_HUMAN Ankyrin repeat domain-containing protein 50; 0.0 2823 97.90 0.991666666666667 5 coding 1 1 1 1 -0.107871554098852 0.531921524500357 0.0388693613803582 0.63373990503616 CAGTGGGGGTTGGGAGGAGCACGGCGGAGCTGCTGGGGCAGCTGGAACTGGCAGTTGCCGGGGGCCAAGAGGAGGATCTGGAGCCGGGAGCGTTCTCCGGGCCGGGCGGAGGAGGCGGCTGCAGTGAGAGTTCAGGGAGCGCTGGCGGCGGTGGCTTCTCAGCAAAGCAAGTGTCTGAGACTGAGACTCCGCAGCGGCGGCGGCGGCGGCAGCAGCCCGGACCGAGATACAGAGTTAACGCTGGAAATCTGGAGAAGCATTTTATACAAATTGAAAGATTGGGCTTTCTCTTCAGTTTTCCAGATGTATTGTCTCATCTGCATACTTGAAATATCCACAATCACATAAACTCTAGATGTAATCATGGAGTTACGCGACCCGTCAAGATATAGGAAAAGTGTGGTCAAGGTTCGGAACCAGGCAGTTTTCCACCAGTTCAACAATTAATATAAACATATATTCTCTGCTGATTATCAGGAATAAAGAGCCAAATAAAGTCACGCACATTCTGTTGGCAGATGGACTCTGTGGCTGTTGAATTTTACTGTAACTGGTTACTCTGCCATTCAAACTCAACTTAATATGCAAGTTCCGTCCAAAAGGATGTAAAGACCTGTGTTGATGTACCCAGATGCTAGCAAATGTTGATGGTAAGAAACCTATTATGACTAATCCTTGGGAAGAGAAAGTCTGCAAAATGGCTCAAACGAGTTTACTGCAGGGGAAGCAGTTTTACTGTAGGGAGTGGGTTTTCCACAAGCTTCAGCATTGCCTCCAGGAGAAGACTAACTGCTGCAACAGTGCTGTCAACACACCACCCCTTGTAATGAATTCTGGGAATAATGCTAGTGTTGTCTCTGGGAAAGGAGCTGCCTGGGGTGTATTATTGGTAGGAGGGCCTGGCAGTGGCAAGACAGCCTTATGCACTGAACTCTTGTGGCCAAGTTCACCTACAAGCTTGCAGAGAGGTTTACATCGCCAGGCGTTGGCCTTTCATTTCTGCAAAGCGCAGGACTCTGATACTTTGTGTGTTGGAGGGTTTATTAGAGGTCTGGTTGCTCAGATCTGCCGTAGCGGACTACTCCAAGGATATGAGGACAAACTAAGGGATCCAGCAGTTCAAAGTCTCCTACAGCCCGGGGAATGTGAGAGAAACCCAGCGGAAGCATTTAAAAGGTGCGTCCTGCTCCCTCTTTTGGGAATGAAGCCACCCCAGCAAAGCCTCTATCTTCTTGTGGATTCTGTGGACGAAGGGTGTAACATTACTGAAGGTGAACAGACGTCCACCAGCTTATCTGGGACTGTGGCAGAGCTTTTGGCTGGTCACCACGAGTTCTTTCCACCGTGGCTATTGCTTCTCTGTTCTGCCCGAAAACAGAGCAAAGCTGTTACTAAAATGTTTACTGGTTTTCGAAAAATAAGTTTAGATGACCTTCGGAAGGCATATATCGTTAAGGATGTTCAGCAGTACATCCTTCATCGTTTAGATCAAGAAGAAGCTTTGCGACAACACCTCACGAAAGAAACTGCAGAGATGTTAAATCAACTGCACATTAAAAGTAGCGGGTGCTTTCTTTATCTAGAACGAGTTCTCGATGGAGTTGTAGAAAATTTTATTATGTTGAGAGAGATTCGTGACATCCCAGGAACTCTAAATGGTCTGTATCTCTGGCTGTGTCAAAGACTTTTCGTAAGAAAACAGTTTGCAAAGGTTCAGCCTATCTTGAATGTGATTCTTGCAGCCTGCCGGCCTCTGACCATAACAGAATTATATCATGCAGTATGGACAAAAAATATGTCATTAACCTTGGAAGACTTTCAACGCAAGCTAGATGTCCTTTCCAAACTTCTTGTTGATGGACTTGGAAATACTAAAATACTGTTTCACTACAGTTTTGCAGAGTGGCTCCTGGATGTGAAACACTGCACTCAGAAGTATTTATGCAATGCAGCAGAAGGACACCGAATGTTGGCTATGAGTTATACCTGTCAAGCCAAGAATTTAACACCATTGGAAGCACAAGAATTTGCGTTGCACTTAATTAATTCGAACTTACAGTTAGAGACAGCTGAGTTAGCTCTGTGGATGATATGGAATGGCACACCTGTCAGAGACTCCCTATCTACTTTAATACCCAAGGAACAAGAAGTGCTGCAGCTGTTGGTGAAAGCTGGCGCTCATGTCAACAGCGAAGATGATCGCACATCATGCATCGTCCGGCAGGCCTTAGAAAGAGAGGATTCCATTCGGACATTATTAGACAATGGAGCTTCAGTAAATCAGTGTGATTCGAATGGGAGAACGTTACTGGCTAATGCGGCTTACAGTGGCAACCTCGATGTGGTGAATTTACTGGTCTCTAGGGGAGCAGATTTAGAAATAGAAGATGCTCACGGACACACACCGCTTACCCTGGCTGCTCGACAAGGACATACCAAGGTGGTTAATTGTCTGATTGGTTGTGGAGCAAATATTAATCACACCGATCAGGATGGCTGGACAGCATTGAGATCCGCGGCTTGGGGTGGTCACACCGAGGTTGTGTCTGCACTGCTTTATGCTGGCGTAAAAGTGGACTGTGCAGATGCCGACAGCCGAACAGCTCTGAGAGCAGCAGCCTGGGGAGGACATGAGGATATTGTGCTGAACTTGCTCCAGCATGGTGCTGAAGTCAACAAAGCTGACAATGAAGGCCGAACTGCTTTGATAGCGGCTGCCTACATGGGACATAGAGAGATTGTGGAACACCTGCTGGATCACGGAGCAGAAGTCAATCATGAGGATGTCGACGGCAGGACTGCACTCTCTGTGGCTGCACTTTGTGTTCCTGCAAGTAAAGGACATGCATCGGTCGTTAGCCTTCTGATTGATCGAGGTGCTGAAGTTGATCACTGCGATAAAGATGGCATGACGCCCCTACTGGTGGCTGCCTATGAAGGACATGTCGATGTGGTTGACTTGCTTCTAGAGGGGGGAGCTGATGTCGACCACACGGATAACAATGGGCGTACACCCCTCCTAGCTGCCGCGTCTATGGGTCATGCCTCAGTTGTAAACACGCTTTTGTTTTGGGGTGCTGCTGTGGACAGCATTGACAGTGAAGGGAGAACAGTGCTTAGCATAGCTTCAGCCCAAGGAAACGTTGAAGTAGTCCGTACTCTGCTGGACCGGGGCTTAGATGAAAATCACAGAGATGATGCTGGATGGACACCTTTGCACATGGCAGCTTTTGAAGGCCACAGATTAATATGTGAAGCACTTATTGAACAAGGTGCTAGAACAAATGAGATCGACAACGATGGGCGGATACCTTTCATATTAGCTTCACAAGAGGGTCATTATGACTGTGTTCAAATATTACTGGAGAATAAATCCAACATTGATCAGAGAGGTTATGATGGAAGAAATGCTCTGCGGGTCGCTGCATTAGAAGGACACCGGGACATTGTTGAATTGCTTTTTAGCCATGGAGCTGATGTTAACTACAAAGATGCTGATGGTAGGCCAACACTTTATATTTTGGCCTTAGAAAATCAGCTTACAATGGCTGAGTATTTTTTGGAAAATGGTGCAAATGTGGAAGCAAGTGATGCTGAAGGCAGGACAGCACTTCATGTCTCGTGCTGGCAAGGCCACTTGGAAATGGTGCAGGTTCTGATCACCTATCATGCTGATGTCAATGCTGCTGACAATGAAAAGCGCTCTGCACTGCAGTCTGCAGCCTGGCAGGGCCACGTCAAAGTGGTGCAGCTTCTCATTGAACATGGCGCCGTGGTGGACCACACGTGTAATCAGGGCGCCACCGCGCTCTGCATTGCAGCCCAGGAAGGACACATTGACGTCGTGCAGGTTTTATTAGAGCACGGTGCTGATCCAAACCACGCTGATCAATTTGGACGTACTGCTATGCGAGTTGCAGCCAAAAACGGACACTCTCAAATAATTAAATTATTAGAAAAATATGGTGCATCCAGCTTGAATGGCTGTTCTCCATCTCCTGTTCACACGATGGAGCAAAAGCCTCTACAGTCAGTGTCATCGAAGATGCAGTCCCTAACAATTAAATCAAACAGCTCAGGCAGCACTGGTGGTGGGGAAGCGCAGCCTTCGTTGCGCAGTTTGCCAAACGGGCCAGCTCATGCATTCAGTTCTCCTTCAGAATCGCCTGATTCGACAGTTGATCGGCAAAAGTCATCATTGTCAAATAATTCCTTGAAAAGCTCAAAAAATTCATCTTTGAGAACTACTTCATCTACAGCAACGGCTCAAACAGTGCCAATCGACAGTTTCCACAGCTTGTCATTTACAGAACAAATTCAGCAGCACTCGTTGCCGCGCAGTAGAAGTCGCCAGTCGATTGTCTCCCCGTCTTCCACAACACAGTCCTTGGGCCAGAGCCATCATTCACCGAGTAGTGAGTTTGAGTGGAGTCAAGTCAAGCCCAGCTTGAAGTCAACAAAAACGAATAAAGGGGGGAAATCAGAAAATTCCAACAAATCTGGGTCAGCTGGAAAAAAAGCTAAACAAAATAATTCTTCACAGCCGAAGGTCCTAGAATATGAAATGACTCAGTTTGATAAAAGAGGACCCACAGCCAAATCTGGGACCAGTGCACCATCTAAGCAGATGCCAGCAGATTCGCAGTGTAAAATCATGATTCCTTCAGCTCAGCCAGAAATAGGTCGATCTCAACAGCAGTTCCTTATTCACCAACAAAGTGGGGAACAGAAGAAGAGAAACGGTATAATGACAAATCCAAATTATCATCTGCAGAGCAACCAGGTTTTTCTCGGTAGGGTTTCAGTCCCACGGACAATACAAGACAGAGGGCATCAGGAAGTGTTAGAAGGATACCCTTCCTCGGAGACGGAATTAAGCCTTAAACAAGCTCTGAAGCTTCAGATTGAGGGTTCTGACCCTAGCTTCAACTATAAAAAGGAAACACCATTATAAAAGTTTCCTATTCTGTGAAACAGAAGACATTGTGATTGGAGTGATTCTTCAGCTACTGGATGAAAATATAAAATGCCTGTTGATTTGCTGAAAAAAAAAAAAGAAGAATGTGATACCTGCAGTACAGTTACCTTAAATACTGTCATGTGCCTAAGTAGTAAGGCTGCCTTCTCAATGTAACCCTCTGTGCTTAAAAAATTTCATTTTGTGTGCTTTGTATTCACTACCCAAGAGTAAGCACTTTTTTTTTTTTTTTTTAATGCAGATATATACTGCAGTTCCCTGATAAAAGATGAAAAATATTTTGAGTATTTTAAGTTAATATTTGATAAGTGTGCATGTGCCATGGTCAAATATATATGAAAAGGCAGTGTTCCTTGTATTTATTTTTTTCTTTCTGTGGCAAACGAAACTTAAGCATACTGTTTCAGTCACATTTACCTTGTTGTAGTGTATGGTTTGTCTCCTGTATCCTTAAAAATGTCACTCAATAAAATAAATCATGCAACTCTTTTATGTTCATTACACCTTCAGCATTGGTTAAAAATGTGTTTCTATTTAATGCTACATCAAGGTGAAAAAATAGTTTCGTGAAAGATTTTTTAAAAGTCTAGTATTTTAGGGAGTTGCTCTAAGTAGTTTAAATTTGGATTTCTCAGTGGAATCCTCCTAATCTTCAGCTAAAGGTGTGAAAAAAAAGAAAAAGAAAACCCACACACAGACTATAGGCAGAACAAAGTTCTGTTTCATTGACTGGGATGCAGTTTCACCTTCCTGTCACTTGTCATTCCACATCCAAGAAGACAGACGATCATTCCTGAGGCGTGAAAATTCTCAGGGACAGAGCCAGGCCTCAGTGGCACGTGTGTAGAGGGAGATGTAGCTGTCTATCTGAGGGTAGATTTTTGATCCCTGAACAATTCACTGACTACCCTTCTTTCTTCTTCCATCCAGTTATGTAAAACATCTGCCACCTTGAACTGTGATGCCGGCTTCTCTCTCAGTCGTTTCTGTTTTGTAAATCACTGCATGTCCAAAATAGCCCCTACTCAGAATCAGTTGGATCAATTTTAATGATTAGTTGGATGAGTATTCTTGATGAATATGTGTTGTCCTTCAGAGATGACACTACTAACCTATCTGCCATAGCACAGGTGTATTTTTTAATTGCTATTTGCTAAATAGTAGTAATGGATTTGCACTTTTCTGTCCACATACTCTTTCCTGTTTTACTCTTTGGACAATCACTTCTAGAATGATAGATGCCAGGATTAGGGGTGAAGTCTGTAACCAAGGAAACTAAAGTCAACTGTTTAGATGAGCATGTGACTCACCACCTTGACCTCCTGGATGGACACTTTAACCAGTTGAGCTAGCTTGGTGGGTTTTATGCATGTCTGGAGAGGGTCAAATTTATTGTTTAGAAACCAAGGTTGCAGGTTTGATCTTTGCAAAAGCCCTGGGATCCTACAAAACCCAGAAATTCTATTCTTTCCATGTGCTGTTGATGAAGAGGAATAGGAAAGAGAATTTGGAGATTCAGCACAAAACCATTGCAACTACTGGACAAAAATCTTTAGAAAATGTCTTAGTATCTGAGGTCAGTAATGTCATCTTCATATATGAAGGACACATACATGACGCATTGTTCACAGAAACAGGAAGAAATATGTAGTTGGTCGTGACAAATGTTTCACTTGATCTTCCTGTAAGGCTTTTGTTTTTGCTTCTGTTTTTTAAAGTCAGCGAAACTTGGGTGTTTGTATCATCGGTAAGTCATAATCAGAATAGGAGATAAATTCAATCAATATTAAGGTGACATGGCAATATTTATAACTCAAATGTGAATGTTTCAAGTGTTGAATTTTTGTCCCTATGGGACATTTATTAAATACACTTAATAGGACTCTTGCAAAGTAGCCTTAAAAGTGTTAATGATTCTGTTAATAACTATGAACACATCCTATTATTAGAACCAACTCTACTCATATCTCAAATACAGTACATTTACTTAATTTAGAAGAGGAAGCTCTAATTTCTTATTAGGTGTATTTTTCTTTAGAAAGAGAATCTTGAAAGCTGCCAGTTTTTCTATTAAACCTTGAATTATTGGAATTGTATTTATTTAATTTTATTGTTTTTACAAAAATGCACCTTGTGGCCAACGGGCAAAGATATGACTCGTGACACAAGGGATTTCTGTTTTCTGAAGAGCTCAGTGTTTTCACATCCATACTATATTCACTTGAAACAGTTGGTAGGAAGAGAACCTGTTGGAGAAATACACTTTTCAAAAGTAAATATTCCTCTGGATGTTTTTATATGAACTAAGTTTTGGAATAGAACAGCAATGGCTTTCAGTAAGGATAAGGCTAATATGGGGGTGGAAGAAGCCCTGCTTTGCTGATTGGTTTCTGTGGGGATTTATTTAATACCATGACTGAAAATAACTTCTGTTCCATTGAGACTAAAAATAGTCCCATAAATAGAAAACTCCTAAGTAACTTTTTTAAATAAAAAACATTAAATTTTGTAAATCACCTGCTGCCACAATACAACTGTGATGCCATATGCTTTTAAACAGTTTTATACCCTTCCATTTGTGTTCCTTTCCTAAAAGTCATGAGTTGATAGCAGAGGAAGTGATTAAAAAAAAAAAATACAGTAATGAAAAATAAAGTCTCCATGTGTGTAGGAAAGGTTTTGGAAGGAAAATGGACCAGAACCCAGTGTGTTCTGCAGAATACAGCCAGTTATGTTGCGTCCCTCCCCCTCACCCCCCACACCTACCAGAATCCTCACCAAAAGTAGTTCACTGCTCGAAAAACAGGAGTAAGTACTTTTTCCAATATTGTTTGCCTATGCAAATACTTGTTTTACTTTAAATGTCCTCCATTTACACTTTGCAGCAAATGTAGTTGCAGACAAATGCTTTTTCTTTTTGAATTTTTCCCTTGGTTTGGGGGTATGTAAATAGCCGAAAAATGTACATTGAATTTCACATTGTAAAAGTTTTATTTTATTCCTTGTATTATATTAAGCAAAAATCCCTATGTAAATGAAAGTGCATAATAAATATATTTGCTTTACAGAGAATACCTTGTTTTAATTTTATCGTTGAATCCGCAGAAGGTGCATGGCATGCTTACAGTAGAAACAACTGTCTGTTAACTTCTTTTAAGTACTGAGGAGATGAATTTGGAAACATTTTACAAAGAAAAAAATGAGATAGAAAAACTTTCAAAGGAAGGTAGAAAT EMBV3_13349 AGCGGAAGCATCGGAGTAATAACACCTGGCGATTTCCCCCCAGTTAACGGCAGACAAAGA Gene BVT0102_194190 + 0 NULL GK000014.2:3171548-3552195 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051140 TCONS_00051141 1 XLOC_031118 NonCoding TCONS_00051141 XLOC_031118 NonCoding NonCoding - 14:3419406-3423428 - TSS38209 3935 2 TCONS_00051141_11 128 0.239390088945362 2 0.0218851032081572 0.000288709832138452 0.000217055928292852 0.000295940089418991 0.000143626181401886 0.000337503363628419 1.76784187074411e-05 0.000125774680454598 1.21128927208503e-09 3.72849428994514e-05 8.17028777831842e-10 0 0 5.95277082468374e-10 2.28944957286031e-05 0.000128807768835629 0 0 0 0.000212361595981059 0.00147666429747204 5.94380062274994e-05 0 0 0 1.37040362883323e-09 0.000111555576770786 0.000291830906843996 0 0 0 XR_228029.1 LOC101905510 PREDICTED: Bos taurus uncharacterized LOC101905510 (LOC101905510), 9e-28 131 70.43 0.0841168996188056 NM_173802.3 METTL20 Homo sapiens methyltransferase like 20 (METTL20), transcript 3e-27 129 71.00 0.066581956797967 0 noncoding 1 1 1 1 -0.0519995992695771 0.777857383010145 0.0545539997611348 0.260069436917566 GGGGATTCTAAGAGGAAACCTGACTGGGGTTGGGAACACCAAAAGGGAGAGGGGAGCTCATTAAACCAGACCGTACAGTCTCTGGGGTCTGATTCGAATTTCCATTGTTTCAGAGATGTCACGCCATAGCACCCCCATCATGACTGGATACTGCTGCCAATGGGTGTGTGATCTGGGGGACAATGCAAAATCTGTTAACAATCAGGGCTCTGGGTGCGCTGCCAGCCAAGGGTGGGTTGAGATTGGGTGCTATGCTGCCCACACTTCTTCCCCAAAGACTAATAAGCACCAGCCTTCGTAGGGTTAGGTGGACTGTCCCACTGTGTGTGTGTGTGGTGTTGAACACTTCCAGATGTCTTTTCAAGGGACATCGCTCCAGATCTGATCCTCATAACGCCCTCTTAGGGAAGTAGACCACACTTTTCTATTTCCATTTCATGGATGATGCAATGGAGGCTCAGAAAGATAAGGTAATTTGGCCAGAATTGGGAGGGGGTCTGGAAAAGACTTATTTTCTCCTGGCTGACAGTGTGCATGACCGTTCTTTGTATCCAGATGTTACTCAAGGAGGAACGGCCCTTCTCTGAGCAGCACACTGTGCACCTCCGTGGACTTGCTTGCTGAATGACTCTTGGACGTCAGCCCATTTGTTGGGGGCGGGAATGCTGCTGGCTGTTTATGTCTGCATACCCGGCACACAGCCTGGAGTGCACAGGGTCTCCGCAAGGATGATGAGTTCTAAGCAGACTGCGGTCCCAGAGCCCCGACCAGCATGTGGCCATGAGTTCGGCCTCCTCTGTACCTCACTCCCCCATCCACAAAGTGGATGTGCCCCCAGGAAGTGCCACCGTGCTGGAAACTTCAGGTTCCTGCCTCCCCACTTCTTGCTGTGTCACCTTGGGCAGGTTGTTTCACATCCCTTCCTCTCCACCTGCATCCCAGAGAGAATGGATGGCAGGACTCCCACTGGGCGATCATGATAATCACATTAAAAACAGCGTATACAAATTGCTTCACATGGTGCCTGACATCCTTGTTTGACAAATTTTCTCTACTCTTCACCTACAACAACCACTGCCTATCATAGAGAGGTCCTTGATTTCATGATTTCTCCTTTCGACTCTCGTTCACCTACTATGGGCTGGCGCTCTGGGTACAAGGAGATGAATAAGCCTCCCGCTGGGTACACGTTGACTGCAGGAGATAAGCAGCATCCACGAGCTCATCGCTCTCCCACTTGGCTTCCCTAACAAGCACCTGAACTGCAGAGATTGGGAGGGGAAAATGGGATGAAGGAGAAAGACCAGGGAGGGAGATGTGAGGCCGTTATCCCTGGTGCAAAAGAGGATGATTCAAGTCGAATGCGGTACTAATTTAAGTACCGAAATGACTGATGTATTTTCCATGGTGTTTTATTAATCAGCCTCAGATGGAGCACAATTTGCAAATTTCATGTGGCAGCTATTAAACATCTCCTACGTAAGTAAATGAAACGGATTTACTGATTCCAGCAGACACTTCGTGAATCAGTAATGGGAGCGAGAGCCCCTACACAGGCGGACATACTGACGCTGCTCAAAATGCAACCCGCGCTCAGACCCCGGCTAAATTGATTTAATCCCTCACACACGTTCGGAGCCCCGGCAGACGCGATCAATATTGATACAGTGGCGGAGGTCAGTGATCACCGGGTAGAGTCCAGGGTGCATGTTGATGCTCTGAGTTTCTGCCCAGGAGAGCAATCCTAGAGGGAGGGGCCAGGGCGGCAGCATCACCAGGTGGTGATTTGCGAGGCCCTGGGGCGAGGAGCTTTGTCTCCCTCTGATGAGAGAGGAACTGGAGGCCTAAAGAGGTAAAGTGTTTTATCCCAGTTTGCGTGCTGAAGAGGAAGAGAGGCCTCTTGGCTGTACAGAGGGCAAGGAACCAAGGATACTGAACCGGGGGCCCTCTCGCACCCCTGGAAAGCTGAGACCCTGGGGTAGTGCAGAGAGCATCCATCTAGCATCCAGGACTCCCTGCCTGAGGCCCAGCTACACGACTTCCTGGCTAAAGACTTTCCCTCTCTGGGCCAGGCTTGCGGATCTATAAAGTGAGACCCTCGGAATCAGGCCCACGACTCAGATGATGAGCGACGTGGATTTCCCTCCGAGAGGAATATCTTGTTGAAAGGACTGTAAGGATGGAGTGTGGAGGCAGGAACGCGTGAAGCTGCAGAGCCTCCTGAGTGGTCCAGCAGGCGTCCTGCTCTCCTGCTGTGACCCTCTGATGCTCCAGATACCGGGCTGTGGGTATGAGGTATTTGCTTCGCATCTGCCCTGTGCCAAACCATGAGGATGCTGGGGTTGAAGGAACTGGACAACGTTCTCTCAACTGGATGATGGGGACAGAAGTGCTGTGGGTGGAAAAGAGGACCTCTCTTGAACTAACTCAGCCACATCTGGGCCTGTTTGCATCGTTCACACACACTTCCTTTTCCCATTTAAGTGCTTAAATGATTTAAAGTGGTTTAAATAGAATCCTTGAAAGTCCCTCCCCTCCCCGTTTCTTCCTAAACAGCTCCTACACAGCCTTCAGGGCCTCGTTCAAGGGTTGCCCACTGAAGTACTTACACCTGCCGCTTCCTCCCATCCAACAGGTAGAGCATCTCCTCAGTCAGCCCACAGTACATCACACAAGTGTTTGGTGGAGCACAATAGTCATTGTTTTCATTTGCCTCTGAGCCCTTTGGGTAGAGCGAGGACATGGCTTCCTCATCATCACTGATTCCCAAGCCCGGAGTACTTACTGGCCCCAGTAATGTTTGTTCCATGAATATTTCTTCTTATTGAGGTCTGACAGGAGAAAGGGCTGAGAAAAGGAACTGATACCCATCAAGCCTGCAGCACCTTCAGTTATAGGCCCAACGCCTGGCCAGGTTAACATAAATCTCCACACTAAAGACCTCTTTACTTCCGTTCCTGAAGCCTATACCACATGCCAGGCTTTCAACAAAAAATTACAAGGTCTGCCAGAAAGCAAGAAAACACTGAAGCAAGAAAAGTCTGAAGAGACAAAGCAAACATCACAACCAGACTCAGACATGACACAGATGTTAGAATTATCAGGCAGGGAATTTAAAATAACTATAATTAATATGTTAAGAACTCTGTGGAAATGTAGACCACATGCAAGACAGATGGGTAAAGTAAGCAGAGGTGGAAACTCTGAGAATCAAAAAGAAATGCTAGAAATCTAAACACCGGAACAGAAAAGAAGAGTGTCCTCCATGGGCTGCTCGGTAGACTGGACACAGCTGAGGAAAGAATCCGTGAGCTTGAAGACAGGGTGATAATAAGTGTTCAAACTGAAATCAGAGAGAAAAACAATGAAAGAATAATGAAAACGGAATGAAAGCATCCAAGAACTGCGGGGCTACAGCGAATAGGTGTAACACACACATAACTGGAACACTAGAAAGAGGAGGACGGAGCAGAAGCATCGGAGTAATAACACCTGGCGATTTCCCCCCAGTTAACGGCAGACAAAGAACTGCAGTTGCAGGAAGCCTGGGGGACCCCTGGCAGGATAAACAGCCAACAGCAACAGCTGAAGGGGGCTTGCAGAGACCAGAGTACGGGGTGCCCAGCATTAGTGCCAGCCTCTCCATTATCTGTACGATACCTCATGGCCATGACTCACAGACCTTTCAGATAGTTCCCCCTGAATCACTAAGCCCAGACTCTGCAGTAGCGAGGCCGGTGGCTGGAAACCCTGCTGGTGGCACTGCTTGCTAGAGGAATGCTTCAGCTGTGCCATCCGTGGCGGTGCCTGGTGGCACAGCAGAAACTCTGCTGGTTGGGAGTTTGGTGGACCCAAAGGGGTCCACTGTACAGATTTGGGGCAACTCATGAATCACCAGAAAGGGGATTTCCCTGGTACTTCCAATGCAGGGGGCA TCONS_00052646 r 3' 128768 TCONS_00052646 r 3' 132789 EMBV3_19780 AGCAGTCCCTCCAACCTTAAAGACTCCTTTTGGCTTTCGACAGCTTGTGTAACCTATGAG Gene GeneID:767836|PNRC2:NM_001076957:302_cdna UTR3_Alt 1 NULL GeneID:767836 2 GENE PNRC2 MGC140026 proline-rich nuclear receptor coactivator 2 EMBV3_05456 CCCAGCGGTAACCACCAATCTTCCTTTGCCAATAGACCTCGAAAATCATCAGTAAATGGG Gene GeneID:510666|BMI1:NM_001038072:88_cdna Constitutive 0 NULL GeneID:510666 13 GENE BMI1 MGC134151 PCGF4 BMI1 polycomb ring finger oncogene EMBV3_16371 TTTGCTCTTCCATTGACTTCTGCTCCACTAGCCAGTATGTTTGTGAGGCCAGAGACGCTG Gene BVT0101_001559 + 0 NULL GK000026.2:25360638-25469309 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150651 TCONS_00150654 TCONS_00150653 TCONS_00089383 TCONS_00150649 TCONS_00150650 TCONS_00150655 2 XLOC_091920 XLOC_054168 NonCoding TCONS_00150650 XLOC_091920 NonCoding NonCoding - 26:25387569-25438015 - TSS112786 1293 3 TCONS_00150650_1 48 0.412219644238206 2 0.974407770839528 0.005233117407391 0.00384734290697955 0.00484541732383514 0.00253874932051537 0.00431835626817257 0.00107063558865859 0.00253477506483841 0.00294834870146972 0.00305259154653152 0.000195076362971965 2.2522176082451e-18 1.88398568959939e-05 0.000475588929679391 0.00157830444264582 0.000114904747242259 0 0 0 0.00202633879227886 0.00194337353259932 0.000760992460960532 0 0 0 0.00192774575825432 0.00199713230875556 0.00179796315144941 2.86731823859494e-06 3.70617352768597e-06 4.59607914218501e-06 0 noncoding 1 0 1 1 -0.43078819713837 0.110705908000018 -0.00656737458713436 0.890721302376369 CCACTGATTAAGCCCATATGTTCGTGCTCAGCAAGTGGCAAGGGATCAAGGAGCTGGGCTCACTTTCAATCCTGAGCTCCAGGAGAAGCAGAGTCCTGACCTCCCTCCCCTAACTCACCACTCCAGGGCTGGGACCAGTAAGCTCTTGGAAGCAGCTCCAGTTCAGGGAGCCTTGTGGTTAGAACTGACCCTGTCTCCAGAGGCCGCACCAAAGGTCAAGGGTTTGAGGAAAGATAGTGCCTTCCAGCCACGTTTTTTTGCTTAAAATGGATCCATCCTCAACAAAATGAGGTACTGGATGAGGTGCTGGTGACGCAGTAATAAGGAAGGTCAGCGTCTCTGGCCTCACAAACATACTGGCTAGTGGAGCAGAAGTCAATGGAAGAGCAAATAAAGGCATTTTACACATTGTGATAAATTCTGGGAGTGCAGCAAGTGGAGATATTATGACACAATATGGCCGTCCCAGTACAGAGCATGGTGAACTGATCAATGTCTCGTTTCCAGAAAATATAATTCTCTGAATGCAGCCTAAAACTGCATTTGTGTTGTTTCTTTTTTTATTAGCCACCTTACACTTTTTATCTGTATTGAGCCAAAATAAAATTTTTATTATACAAAGTATTTTCAGTAAATACTTATTATACAAAGTGACTGCAGCAAATGTGTGAAACAGAAAGAAGAAGGTGACCTGTATTATCACCACTGAGAGTTACTGCTTGCTACCTTTTGGATCTTCTTCCTATTAATAACTATGTTTATGTATGTGTCTTATAATTTTATAAACTGGTTTGATCCACTTACGAAAATGTTACATGTTATTTTCCCCCACGTCAGGAAGTATCCTATATTATCATCCATCGTGGTGACATGATATTGCACTGTGTGGTCAAGCGAAACACCTCATCACTTTTGGATGCGAAGCAGTTAAACCAGGTCTTCCTCCTTCTGTACTTGTGTAATTTTTTTTTTCTAACCTAAATGTAGGACTTTACATTTTTATTAAAAAATCGTATTGTTGCTTTTGAGATAAATTATTAGTCTGTTATGATCTTTTAAGTCATGATTTCATTAACCAATCTCTCCCAGGTTGATACGATTTTAAAATCAGTAAGGATCAAAATCACTGATACATCATTTTAAGTAGGATAGAGCCTCATAGCATTCCCTTGGAAACCCCCCTACAGTTACTCCATTGATCAAACACTGTTTAGTTCTGATCAATTAATAATTTTAGCTGTACTATCCTGTGGCTTGTTTCTCCATTGGAAAATAAGAACTTTCAAAAACAAG TCONS_00150648 s 3' 26933 TCONS_00150648 s 3' 26933 EMBV3_03322 TAGGTCCCAGTTCTGTCTCAGTGTCTGTACCCTAGTGACCACCTGCAGTATGACCAGGCA Gene BVT0102_218773 - 1 EMBV3_01565 GK000005.2:104236942-104237712 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26596 TTTGCCTACAAGTCGGGGGTAAAAATGCCTGTTGGGAGGAGAGATGAGAACGTGGAGGAA Gene GeneID:100124517|KHNYN:NM_001102551:2_cdna Constitutive 0 NULL GeneID:100124517 10 GENE KHNYN MGC166217 KH and NYN domain containing EMBV3_31237 GCTAGGACTAGGTCAGTAGCCCAGAACGCTGTGGTAGGATTTCATTTGCTCCCTCTAATA Gene BVV0102_296349 - 0 NULL GK000014.2:56658520-56787217 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053517 TCONS_00053522 TCONS_00053525 TCONS_00053523 TCONS_00053521 TCONS_00053524 TCONS_00053520 TCONS_00053519 TCONS_00053518 1 XLOC_031760 Coding TCONS_00053518 XLOC_031760 Coding Coding - 14:56785517-56790680 - TSS39462 4731 1 TCONS_00053518_5 1003 0.0445994504333122 2 0.0838822161952731 0.0914840974492628 0.0469428809071581 0.0736813776688537 0.0484931916920006 0.0414185923435931 0.022228994367769 0.0236169511131658 0.0254390696994851 0.0447147399896641 0.00312338014296214 0.000971365894259545 0.000628615228480934 0.00804986701407206 0.0167751693399586 0.00936196012086035 7.30515329772528e-18 1.31559417457936e-15 0 0.0333354567673074 0.0519503891349438 0.0201230271993227 8.86592466718971e-12 1.68695943914114e-21 2.87028201920844e-17 0.0419984009011266 0.0268519618885277 0.0283922798586169 0.000183238761388659 0.000154470533544826 0.000522903301154022 NM_001083679.1 SMG5 Bos taurus smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) (SMG5), mRNA. 3e-98 365 68.50 0.216867469879518 NR_033609.2 A930017M01Rik Mus musculus RIKEN cDNA A930017M01 gene (A930017M01Rik), non-coding 0.0 1885 74.48 0.620798985415346 TCONS_00053518_5 sp|Q6ZPY2|SMG5_MOUSE SMG5_MOUSE Protein SMG5; 0.0 759 43.36 0.979062811565304 2 coding 1 1 1 0 0.161183840708522 0.354051654904003 -0.140672041884024 0.0405976015879593 GTGGAAGCAAGAATGATAGATGATTATAATGGATGTGCTACGAAGACACAAATCGGTGTTGTGGGAAGAGTCCAGCCCTATGGAGAGCAGCCAGGTAGAAGCCCTGAAGGCCAGACTCCTCTACCAGGATGTGTGCAGGGCAGCTCAGTGTCTCGACCATTTCCTTCTAAAAGGAAATGCCCACGAAGAGCTTTTCAAGCCTCATGTCCTGGCCCTCAGGGATATGGTCCAGCAAGTCTGCATTAAACTCATGTTTCTGCACCCAGTGGAATATGGGAGGAAAGCAGAAGAGCTGCTCTGGAGGAAAACGTACTCTGACGTGGTTCTGCTGCTGCTGAAGCCCAACAGAAAAAACACGGACTCCTCTGAGGAACAGTGGGAAGGCCCCCTGTGGGCGCATCTAAAGGGTGGCCTCAGGTTCTATGAACACCTTTTCCTGTTCCTGCAGGAGCACTACCAGCTGGGCTTGTGGAGCTATATCGACTGGCCTCACAGTGCCATCCACTTCATCGGCTGCAAAAGAGCAGGTCCTGCATCAGAGGAAGAGGTGGACTGGGCACGGATGGCCTGCCACCGCTGCCTGCTGTACTTGGGAGACTTGTTCCGCTTTCAGAATGAGTTCCTGGCCCTGCACACCAAGGACCTGGCAGAGAGGTGTTATTACAGAGCCCTGTCAGTGGCACCACACATGGGCATGCCCTTCAACCAGCTGGGAACTCTCACGGGGAGCAAGTACTATGGTGTGGAAGCCACATACTTCTACCAGCGCTGCCTCCACTCGGAAGTGCCTTTTAAAGGGGCATCTTGGAACCTCAAACAACTCTACCATCATGCGGGAAAAAGATATAGCCGGCTGAAGAGGAACCAGGGGAAGAAGCTCTCTCTCAGCCAGAGGCGGTGTTGGGATAACAAAAGGTTACTGGTTAGTTTCCTCTACCTTCAGAGCCTCTTGCAGCCTCAGAGGAAATTCAGAGCCACCAGGCTCATGGCCTTGTGCCAGCTGGTTCTGGAAGACTTCCGTCTTTGTCTTTCCTATCGGCCCTGCCCATCCAACCAGAGCCAGGCCTCCAGAGAGAGAAAGCCCGCAAGAGGCTACCAGTTCCTCCCCGACCTCCTCATCTTCCACATGGTGGTCCTCTGCCTCATGAGCGTGCACAGCCTGAGGACAGCAGGCTCCAAGCAGCACAGGACAGCGGTCACCTTCACCTTGACCCTTTTCTCCCATTTAATTCAACACGTGACGACACGCCTCCAGGCTGAGCTCCAGAAAGGGAAGCTGACTCCAGAGGTGGACGTCCCCAGGGACAAGGAAGACCAACAGAAGATGGAGGCTGGGGAGGGGCAACAAGATGGTCTAGCCCCCTCCCCTGGGCCCCGCCACAGCAAATCTCAGAAAACCCACAGGTCATCTCACGTTTCCAGTGAGGGTGACAACCCAGAAGCCAGTTTTCATTCTTGCTGTGACTGGGATGAGACAGAAGAAGATGAAAACACATCCTTATGCTCACAAGTCAGCTCAGAACTCAGCAGTGAAACCACTTATTCAGACACAACTGATGATGAGGAAAGTGGCTCCCTGAATCCACAAGCAACGCAGGAGGGTGGAGCTAAATCCAAAGATAGAATTTTCCCTCCCAGGGATAAGCTGAAGACGTGTCAACTTCCCAGTCATCTCCTAGGTCTCTTAAAAACAACCAGTTCCGCTAGCCTATCAGCCCCGTCGAGCCACAAGCTTCCAGGCAAACATGGCTTTCACTTGGCTCCTGTCTTCAGCCACAGTTTCTTTACGCCTCCTAGTCCTGCCTCCAGCAAAGCATCTGTCACAGAGGATGACGTGAGCAGCTGTCTTGAGACAGAGCCTCCTGCTGGCTGCAACTTGGGGCAGAATGCCTCCATCAGCCAACCCTGCAGCAATCTCCAGACCATTCAGAAGAAACTGCAGGTCCTCTCTGCAGAGGGGCTGCTGCCCACGGTCAAGGTGATACTGGGCTGGCTCCGCGCCAACTGCAGTCTCCTCACCGCACATGGGTGGAGCCTGTTTAGCCTGTGGGACCACCTGTCCATGCTGCTGAACCTGCTGCCCTCTGTGCGAGACCTTCAGGAGCCAGGCCTGGGCCTGTCCTACCATCTCCATGAGCTACTGCAGAGCTGCAAGGGCCCACACCTTCCCCAGTTCCTGAAGCTCCCAGAGGACATTGCCCTGGGCCAGCACTGGCTGAAGCAGGCTTCCCAGGAGAGGGTGGGCTTGGAGCAGGACCCACCTCCACTCAGCTCCCAAGATGAAGCTGCTGTACGCGTCTGTTTCCTCAGAAGCTTTGGCCACTTCGCCACGACACTCCCTGGACAGTTCCTGAGGTATGACTCTCATTCAGGGGTCTTTGTGAGCACTGGGTTTGAAGGACCAGACAACCTATCTCAGCAGTTGCTAGAGAAAACTTCCAGGATCAGATTTTTCAAAGACATAGTACAACTGTGGCTTCAAAGTGAGGTGGTGCTGCTGGAGAAAACTCTCAGGCACATCCAGATTCGGTCAGCTTTGACCCTTTACCTGTTCCCTGACCCCCGGGCCCTCTGTGAGCACCTGCCAGTCATCCGGCAGCTTGCCACCAGCGGTCAGTTTCTCCTCATCGTACCCAACATCGTGGTGGACATATTGTATATCCTGAGAAGGGAGGACAAGCGGGCTTCAGCAGCCATCACCTTCCTAGAGGGGGAGCTGAAGAGAGGGAACCAGTACCTTCTCTGCCAGTCCTGTGTGTCTGTGACGTTGGTGAGACCCAGGATGACCAGGCCAGACTCTGATGCCTGGGACCTCTATAACATGCTTGACATCTGCAGAGGTCTGCTGGACTCATCCTGGCTGGGGACCCCCGACCACAGGAATATGATCACCATCCTCACGGGCATCTGTTTAGACAACCCTAGGAATCTCTCATACCCCCTGCAGCTGGTGCTGGGGACGGCAACTGAAGCTGGTGTGGAAGTCAAGAATGTCCTGCGCTTCTACAGGAAGTGGAAGATGGTCAGCTGATGTGGTCATATCTCCCTACTTCTCCCTCGGCACTTACACATCAAGCTCAGTCTGTTCACCTCTCTTGTTCGCACCTAATGTTAAAGGTAGCTGTTGTGTAAACTCATATCTGTACCTACCTACCTATGGGTAGAGTCTCAGTGGACCATCTCCCAGAGGCCTTCATGTTTCCTTCTTTGTTGTCTTGACTTGATATCACATTCTCTGTCTGAAAAATATCTCTAGGTTAAACTAACTCAGTATTTGGTGTTTTTGTGGTAAAGCAGCAACTTAAGGAGGCATTTCTGCGTCCCTGCTCAGCTGGTGGAACTGTAATTTGTTTTGCTCTGTTTTTTTTTTTTTTTGCTTTGCTCTGCTTTGTGACATGAAACTTTTTAATGCTATTTTATTGTAATGGATCATGCCTACTATGTAAGGTAGGCTTGGCCATCTGTGAAAGCTCAATAAATGGAAAGTTAAAATTCTGATTGGAGTGAAGGGTTTTATTGCAATTCCTGGTTACTTCTTCACTATCTTTTATGCTCCATTCAGGTTTTTCCCTTTTGGCTAGGACTAGGTCAGTAGCCCAGAACGCTGTGGTAGGATTTCATTTGCTCCCTCTAATATGATAGCAATAGCCCCAAGGATCAGCTGATCTGGTTCCAGTTATCTTCCATTGGAAGATAACCTACTTCCCAGATTATCTGGGAGTAGGTACTATTTAGTGGTACAGTATTGGTAAAGTTTCTAATTTGGCTACTATGACATTGTCTCTTGCTTTTTCCCTGGCTCTCAGATTCTTTTGGGACCTCTTGTCAACATTGTACTGATGTATACTCTGGAGAGCAGCTCTTTTAGCAAACTCCATTAGCAGAGTTTGAATGTGGACCCTGTAAATACTGGCCACAAGTGAATATCTACCGATTTACTCAGATTGGCATGCATTACAAGTATTGACATTAATCTCCTCCCCTCCTCCCATCCCCAGAGTTCTTCCCTGGTAAACCATCACATTTCAAGGCCAAACTTAATCTTCTTTTAGGATCCTAAGTTCTTGAGGCATCTGAATCCTTCTCTGTCTGGATATGTTCCTCCCTAAGTCAACCTCAGGTCTAATTTATCCAGAAGCAGAAATTACCTTCTGAGCTTTTTCCTGACTCATGGGTTCTCATTTCTCAGTTGTCCTAAGCTAAGCCTTTGTGTTTCAGTTAAACTTCTGTCACTTTCCCTTTTCCATGCTTTTTAAAGTATTTTATTGTATTTATTAAAGAAATTTCAACTCATGGAAGAAAATCTTAAGAGAAAAACCCAAAGGTTGTTATACCCTAATATTAGCATTTTGTTTTCAGTTTATTTATAACTTGTCATTCTTCCTCTGGATACATGTTTTTCTTAGTTATATTCTATAAACACCTTTTTATTTTTAAAAAACCTTTAGTGGTGGAAATCTTTATTGCTTTATTATTATTAAAATTTTAATTTTGTATTGAGATATAGCTGATTAACAAGCAATGTAGTGATAGTTTCAGGTGAGCAGCAAAGGGACTCAGCCGTACATGTACGTGTATCCATTCTCCCCCAAACTCCCCTCCCACCCAGGCTGCCACATAACACTGAGCAGAGTTTCATGAGCTCCACAGTAGATCCTTGTTGGTTATCTGTTTTAAACACAGCAGTGTGTACATAAAAATCTTTTTAACTTCCGTTTCTTCAAATTACAG TCONS_00051977 r 3' 126999 TCONS_00051977 r 3' 131687 EMBV3_02092 AGGTGGCTTTCTGTCTCTGGTCACGTGTGTCTTCAGGCGGACCTTCCTGTATCATCTGTT Gene GeneID:534015|TMCO7:XM_002694832:728_cdna Constitutive 1 NULL GeneID:534015 18 GENE TMCO7 NULL transmembrane and coiled-coil domains 7 EMBV3_03185 AAGAACCAGCCTGATGCCCTCAAAACCCAGCACCCGTTTGGCTCTGTGCCCTTTGGCTAT Gene GeneID:511960|CYP27A1:NM_001083413:77_cdna Constitutive 0 NULL GeneID:511960 2 GENE CYP27A1 MGC151538 cytochrome P450, family 27, subfamily A, polypeptide 1 EMBV3_23863 AGGTGGCTTACGTTCTCAAGAAGGCCTTATCCATTTCGATTGTGTGACAGATTGAAATCG Gene GeneID:512904|EML1:XM_002696768:445_cdna Constitutive 0 NULL GeneID:512904 21 GENE EML1 EMAPL echinoderm microtubule associated protein like 1 EMBV3_20801 ATCATCCCCGTCCGGGTGGCAGATGCTGCTAAAAACACGGAGGTCTGTGATGAACTAATG Gene GeneID:534286|ALAS1:NM_001101154:238_cdna Constitutive 0 NULL GeneID:534286 22 GENE ALAS1 ALAS-H aminolevulinate, delta-, synthase 1 EMBV3_33559 AGCACAGTGGTGGCCGAGGATCAGGAGTGGGTGAATGTCTACTATGAGATGCCTGACTTT Gene GeneID:282312|POLR2A:XM_002695804:381_cdna Constitutive 0 NULL GeneID:282312 19 GENE POLR2A NULL polymerase (RNA) II (DNA directed) polypeptide A, 220kDa EMBV3_32806 CCTTGATACTCTTGAGTTCCACCAACTCTTAACGTATATCTGAGGTGTGAGGAAGCCGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34382 GGCTGGACTGCATCCTTGGGAAAGAACCTACACGACTGCCTTTTGTTTACACTGGTTATT Gene GeneID:504531|PIK3CD:XM_002694047:130_cdna Constitutive 0 NULL GeneID:504531 16 GENE PIK3CD NULL phosphoinositide-3-kinase, catalytic, delta polypeptide EMBV3_17500 TGGAAGTACAAGCAGATGTACAGAAAGAACGGTACAGCCTAAGTGGAGAGTCCGGCACAG Gene GeneID:540195|RNF19A:XM_002692784:57_cdna UTR3_Alt 2 NULL GeneID:540195 14 GENE RNF19A NULL ring finger protein 19A EMBV3_37602 GAAACCTTGCAGCTGTACCCTGATGCTGGATGGCACTTACCTTGTGTGGTCCTAAATTGG Gene GeneID:784938|LDHA:XM_002699932:79_cdna Constitutive 0 NULL GeneID:784938 X GENE LDHA NULL lactate dehydrogenase A EMBV3_07837 CCCTGAGCTCCCCATCAAGATGTGAACCAGAGTCCTGTGATCCTGAAGCTTCCCAAATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35842 ATGCAGCCACAGTTTTGGAACAGTACGCTCAGGACCATGAAGAAGCTGTGCTCGTGCTGT Gene GeneID:505465|LOC505465:XR_084717:35_cdna Constitutive 0 NULL GeneID:505465 8 PSEUDO LOC505465 NULL similar to inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein EMBV3_13961 CCATTCAGGGTATGGTCAAGCACTGCCTAGAAGTCGCCAAGGCTATAGATGCACACAAAG Gene GeneID:515176|DNASE1L1:NM_001038634:52_cdna Constitutive 0 NULL GeneID:515176 X GENE DNASE1L1 NULL deoxyribonuclease I-like 1 EMBV3_00054 GTAGTGCCTTTACTCCTGCTCCTTAAGCGTCTGTCCTTCTGTGGAAGTCATGTTCTGCAC Gene GeneID:783707|LOC783707:XM_002693301:132_cdna Constitutive 0 NULL GeneID:783707 15 GENE LOC783707 NULL similar to olfactory receptor 561 (predicted) EMBV3_25635 GGATGCCTGGCTCATTCTACTCCATCCACATTTAACTGAGCTCCTCCTCTTGCTGTTTCC Gene BVT0102_061013 + 1 EMBV3_28702 GK000003.2:10683412-10821556 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27599 AGCTTGTGTGAGCTCCTAATCACTGATTAGGGATCTGCATGGCCTACTATGAGAGCCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09649 AGGTCCTTAAGACGACAAGTCCTAATGGGGATAGCATTTGGCAACTGGTGGAGCCAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02938 TCCTCCATGTTCCATCTGGTGCTGAGCCTGCTGTCTGTCCTTCTCTACATTGGTGCTCTG Gene GeneID:613992|LOC613992:XM_002696553:28_cdna Constitutive 0 NULL GeneID:613992 21 GENE LOC613992 NULL similar to myeloid-associated differentiation marker EMBV3_28089 TCTGTGGTGGAGTTTTCCCATTTCTTACAAGCTCCTAGGTGCTGCAGATGCTGCTGCCTA Gene GeneID:281160|FGF1:NM_174055:4_cdna Constitutive 2 NULL GeneID:281160 7 GENE FGF1 NULL fibroblast growth factor 1 (acidic) EMBV3_15298 TTTTTATTTTACCTTCCCTCCCTGGCTGCTGGCTCCGTTTCGGTCCTGCTGCTAACCTGG Gene GeneID:617828|ADORA2A:XM_002694674:231_cdna Constitutive 0 NULL GeneID:617828 17 GENE ADORA2A NULL adenosine A2a receptor EMBV3_10206 TCTGACCGAGTGCTCGTATCCCTGATGGGGCTTGTGGTCCTGTTTATTACCATCCTTCCA Gene GeneID:507154|MRPL4:NM_001037450:5_cdna Constitutive 0 NULL GeneID:507154 7 GENE MRPL4 MGC128303 mitochondrial ribosomal protein L4 EMBV3_40889 GGAACATGTCCAAGGGTGCCAGAAGGAATGTTTGGAACTTGTGCTGAAAGGTGCACAGGA Gene GeneID:515676|LOC515676:XM_002695644:80_cdna Constitutive 0 NULL GeneID:515676 19 GENE LOC515676 NULL similar to CG33196-PB EMBV3_21830 CAGGCCGCTTCCTCCTGCAAACGCGGTCTGGTTGTTTACTATGTCATTGGCTGGTCCAAC Variant GeneID:781766|LCA5L:XM_002685102:53_cdna 180^337 1 EMBV3_28571 GeneID:781766 1 GENE LCA5L NULL Leber congenital amaurosis 5-like EMBV3_19980 AAGCTGTATTCAGGGCCCCTCATGTAGCCCGAAGACCAAGAAAAATCTGACATTGGCCCT Gene GeneID:538893|GOLGA4:XM_002696911:414_cdna Constitutive 0 NULL GeneID:538893 22 GENE GOLGA4 NULL golgi autoantigen, golgin subfamily a, 4 EMBV3_24674 TGGAACCAGAGTAGCTGTGGAGTGGGGGAGAAACACAGGGTTGGTGAGCCCAGCACGTGT Gene BVV0101_026614 + 0 NULL GK000023.2:13829129-13832464 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132416 TCONS_00132421 TCONS_00132415 1 XLOC_080773 Coding TCONS_00132421 XLOC_080773 Coding Coding DAAM2 23:13775521-13831962 j TSS99079 6204 1 TCONS_00132421_8 1084 24 0.890503189227498 0.0017295204981194 0.000774455358487649 0.00110731028437268 0.00169338846483956 0.00125178753153001 0.000403838479282092 0.000886392990666544 0.000634449118348534 0.00119886376229773 2.5096380992525e-08 2.25004184025324e-05 3.94319118803054e-05 0.00010687390388697 0.0010862394554466 0.000223188038557927 0.00090822825771616 0.00173079863794397 0.000282377750011875 0.000457400934573727 0.000916322844710082 0.000462461080537751 9.26674398521202e-05 0.000108785867262976 0.000222901217707826 0.0010385253236251 0.00106287757335872 0.0011030572510835 2.23437834835469e-05 3.14657260972588e-05 5.36437263426728e-06 XM_001252205.5 DAAM2 PREDICTED: Bos taurus dishevelled associated activator of morphogenesis 2 (DAAM2), transcript variant X1, mRNA. 0.0 1.075e+04 99.16 0.977272727272727 NM_001201427.1 DAAM2 Homo sapiens dishevelled associated activator of morphogenesis 2 (DAAM2), transcript variant 1, mRNA. 0.0 4742 85.58 0.650870406189555 TCONS_00132421_8 sp|Q86T65|DAAM2_HUMAN DAAM2_HUMAN Disheveled-associated activator of morphogenesis 2; 0.0 1916 95.21 0.999077490774908 3 coding 0 0 0 0 -0.0591602496174713 0.749325879157776 -0.0357299851619638 0.45521960664416 ATGGCCCCCCGCAAGAGGAGCCGCCATGGCCTGGGCTTCCTGTGCTGCTTTGGGGGCAGTGACCTCCCTGAGATCAACCTCCGGGACAACCACCCTCTGCAGTACATGGAGTTCTCCAGTCCTATCCCCAACCCAGAGGAGCTGAACATCCGCTTTGCAGAGCTGGTGGATGAATTGGATCTCACCGACAAAAACCGGGAGGCTGTATTTGCACTGCCCCCTGAGAAGAAATGGCAGATCTACTGCAGCAAGAAGAAGGAGCAGGAGGACCCCAACAAGCTGGCGACCAGCTGGCCTGACTACTACATCGACCGCATCAACTCCATGGCCGCGATGCAGAGTCTGTACGCGTTTGATGAGGAGGAGACGGAGATGAGGAACCAAGTCGTGGAAGACCTGAAGACTGCCCTCCGGACACAGCCTATGAGGTTTGTGACCCGCTTCATCGAGTTGGAGGGCTTGACCTGTCTGCTGAACTTCCTCCGGAGCATGGACCACGCCACCTGCGAGAGCCGCATCCACACCTCCCTCATTGGCTGCATCAAGGCGCTGATGAACAACTCGCAGGGGCGGGCGCACGTGCTGGCGCAGCCCGAGGCCATCAGCACCATCGCCCAGAGCCTGCGCACGGAGAACAGCAAGACCAAGGTGGCCGTGCTGGAGATCCTGGGCGCTGTGTGCCTGGTGCCCGGCGGCCACAAGAAGGTGCTGCAGGCCATGCTCCACTACCAGGTGTATGCAGCTGAGCGGACGCGCTTCCAGACCCTCCTGAACGAGCTGGACCGGAGTCTGGGCCGATACCGGGATGAAGTGAACCTGAAAACAGCCATCATGTCCTTCATCAACGCTGTCCTCAATGCTGGCGCCGGAGAGGATAACCTGGAGTTCCGTCTGCATCTGCGGTACGAGTTCCTGATGCTGGGGATACAGCCCGTGATTGACAAACTCCGGCAGCACGAGAATGCCATCCTGGACAAGCATTTGGACTTCTTCGAGATGGTCCGGAATGAGGATGACTTGGAGCTGGCCAGGAGGTTTGACATGGTCCACATTGACACCAAGAGTGCTTCCCAGATGTTTGAGCTGATCCACAAGAAGCTGAAGCACACGGAGGCCTACCCATGCCTGCTGTCCGTCCTGCACCACTGCCTACAGATGCCCTACAAGCGAAACGGTGGCTACTTCCAGCAGTGGCAACTCCTGGACCGCATCCTGCAGCAGATTGTCCTCCAGGATGAGAGGGGCGTGGATCCTGACCAGGCTCCCTTGGAGAACTTCAATGTCAAGAACATTGTCAACATGCTCATCAATGAGAATGAAGTGAAACAGTGGCGAGACCAGGCAGAGAAGTTCCGGAAAGAACACGCAGAGCTGGTGAGCAGGCTGGAGAGGAAGGAGCGGGAATGCGAGACCAAGACGCTGGAGAAGGAAGAGATGATGCGGACGCTGAACAAGATGAAGGACAAGCTGGCGCGCGAGTCTCAGGAGCTGCGCCAGGCTCGGGGCCAAGTGGCAGAGCTGGTGGCCCAACTCAGTGAAATCTCGACAGGACCTGTATCTTCCCCCCCTCCCCCTGGGGGCCCACTTACCTTGTCTTCCTCGATGACAAACAACGACCTGCCTCCACCCCCGCCCCCTCTTCCGTTCGCCTGCTGCCCCCCACCGCCACCCCCTCCTCTGCCCCCCGGGGGGCCTCCAACTCCCCCCGGCGCCCCACCTTGCTTCAGCATGGGGATGCCCCTCCCCCCAGACCCCTTCCCCAGCAGTGATGTCCCACTCAGGAAGAAGTGTGTCCCCCAGCCTTCACACCCACTGAAGTCCTTCAACTGGGTCAAGCTGAATGAGGAACGTGTCCCTGGCACCATATGGAATGAGATTGATGACATGAAGGTGTTTCGGATTCTAGACCTCGAGGACTTTGAAAAAATGTTTTCAGCTTATCAGAGGCATCAGGACTGGGGGAAACACACACGTCAGCCTTGCCACTCGGCTTGTCGGTTACAGAAAGAGCTGGGCTCCACCGAGGACATCCACCTGGCCTCACGCAAGGTCAAAGAGCTGTCTGTCATTGACGGCCGGAGGGCACAGAACTGCATCATCCTTCTCTCCAAGTTGAAGCTGTCCAATGAGGAGATCCGGCAGGCCATCTTGAAGATGGATGAACAGGAGGACCTCGCTAAGGACATGCTGGAGCAGCTCCTCAAGTTCATCCCGGAGAAGAGCGATGTTGACCTTCTGGAGGAGCACAAGCATGAAATCGAGCGGATGGCCCGCGCGGACCGCTTCCTCTATGAGATGAGCCGGATCGACCACTACCAGCAGCGGCTGCAGGCTCTCTTCTTCAAGAAGAAGTTCCAGGAGCGGCTGGCTGAGGCCAAGCCCAAAGTGGAAGCCATCCTGCTGGCCTCCCGGGAGCTGATCCGCAGCAAGCGTCTAGCGCGGATGCTGGAGGTGGTCCTGGCCATCGGCAACTTCATGAACAAAGGGCAGCGTGGGGGTGCCTACGGGTTCCGGGTGGCCAGCCTCAACAAGATCGCTGACACCAAGTCCAGCATCGACAGAAACATCTCTCTGCTCCATTACCTGATCATGATTCTGGAGAAGCACTTCCCTGACATCCTGAACATGCCGTCTGAGCTGCAGCACCTTCCAGAAGCCGCCAAAGTCAACCTGGCAGAGCTGGAGAAGGAGGTGGGCAACCTCAGGAGGGGCCTCAGAGCAGTCGAGGTGGAGCTGGAATATCAGAAACGGCAGGTGCGAGATCCGAACGACAAGTTTGTGCCGGTCATGAGTGACTTCATCACGGTCTCCAGCTTCAGCTTCTCAGAGCTGGAGGACCAGCTCAATGAAGCCAGGGCCAAGTTCTCCAAGGCCCTGATGCACTTTGGGGAGCAGGACAGCAAGATGCAGCCGGACGAGTTCTTCGGCATCTTTGACGCCTTCCTGCAGGCTTTCTCGGAGGCTCGGCAGGACCTGGAGGCCATGCGCAGGAGGAAAGAGGAGGAAGAGCGGAGGGCGCGCATGGAGGCCATGCTGAAGGAGCAGCGGGAACGTGAGCGGTGGCAGCGGCAGCGGAAGGTGCACGCGGGCAGCGCGCTGGAGGAAGGCGGCGAGTTTGATGACCTGGTGTCGGCCCTGCGCTCCGGAGAAGTTTTCGACAAGGACTTGTGCAAACTCAAGCGCAGCCGCAAGCGATCAGGGAGCCAGGCCCTGGAAGCCACCCGGGAGCGGGCGATAAACAGGCTAAATTATTGACCTGAGGACTGGCCAGCAGCGGGAGACTGGGAGACAGGGATGGGTATCCCCTCCTCCCCCCGCAAGGGGGCGAGTGGTGGAGGTGCGAGAGTGATACTTAACGCGACTTGGTGCTGGGCTTAGAGCCCTGGACTGGGTCCTGGGGGCAGGGCTGTGTGTGGCAGGACCCTGGTGTCTCCCCACCTGAAGGGGTTTCCCTCATCTCCACTTCCCATTATTCTTCCTGCACCCCAGCCCCAGGGGTCACTCTCCTGAGGCTGACTTGGACATCCTTGGCCAGCCCCAGCTGAAGGGGCCCTGTTCCCCACCCTGCAGCATGGGCACCTGTGTGTTGGCACAGAGCTGTTTCTGATCTAGACTGGAGAGAGGTCCACAGACCATGTCCAGATTTCCCATGCTGTGGGAAGTTAACAGTGGGGTGGGGGCACCCAGGACCCCATCTCTCAAGAGTAGGGTTAATGGAACATTGATCTGGGGTGAAGTATCCTATCAAATGGAAGAGGCATTAGAGATGCCAGCTAGGTGTTCCAGAAAGAAGAAAATGCTGGGAGGATGCTGCGGGGACCAAGTTATCACGACAGGGTGGCAGTACCCATTTCCTAGATCAGAAGTCCGCTGGCCCCTCTCTGGCATGTCATAAGTCTCTTTCCCTTCCCTCCTGCCATCTCCAGTCTACTAATCCAGAATTTCAAAATTCACCTTTGGGTTCCCATGATCGTGGCTCACTATCAGGCATTTGATGGATCTGGTAAGGGTTCAACAAAGACCCCATTATCACCACACCCTGGATGCTAGGCACAGGGATCCCGGGACAGAACTCTCCTTCCCCACCCAGACCTGGTATATCTTGACCGTTGTCTTGGAGACAGTGACCTCACATGTTGGCTGGGGGTTCCAGAGGCCAGTGCTTGAATGGCTAGGTTCACCCTAGAGCTCCTGGGTCACCAACATCACTCAGAGCCCACACTTCTCTCAACATCTGCAGTGACCTCCTGCTCTGTTCAGCCTGCACAGGGCTGCTTTAAACTGCCTGTATCTGGCTGAGGTTGGCCCTGGGCATTGGTTCCTGAGAAGGTCCCAAGGGCAAGAGCTTCCCCTCTGCCACCTATAAGGGGGTATGAGGGCACCCCCCCCCCACCATCAGCAGCATTCAGACGGGGCACAGCAGAGCAAGGCAGGAGAAGCCGGGGAGTACCCTGCCCAGGGGAGCCAATGGTGGAAACCTGAGGGGGTCCCACTCGCCCATCTCTGGTGCCTGATTTGGTCCACCTGACTTCCAGGGGGCCCATTCTGGTTCTCCTGTCCACTCTGACCTTCATTTTGTCCATCTAGAACTGTCCTCGTGGGGAAGGATGATGACTGGTATCTATAGTTTTCTCTTGTAAAAGGACAGAGGGTAAGCCCAACTCCAGCAAGGTTCATACTTTTAATACATTTCCTATCTCCTAGAATTAACCCCTCATCCTCAGTGTCAGAGACCTGCCTGTCCCTCCCCCCGCCCCACCGCCTCCCCCATCAACAGGCTCCCTGCCCTTCTGTCCTGCCCCCACTTCTGATTCTCACCTCTGACCTCCTCCAGCTCAGGGTTATTTCCAGTGGACAGACTGGTGGGCTGGGGCCCACTCTTCAGCTGCCTTTTCTGGGGGTGGAACCAGAGTAGCTGTGGGGTGGGGGAGAAACACAGGGTTGGTGAGCCCAGCACGTGTGTCGGTTCGAGGGGGAGGGACTGGAGTAAGTGTGAGTGTGGCGGGGACAGGTGTGAAAAGGCCACCAGAGTCCGTGTGAGGGCCAGGGGAAGGCCTCCAGGAAGGCTGGCTGCAGGGCAATGTGGCACCCACGAGCCCCCGCTGTTAAGAAGCTGGCACTGGGATGATGGGAAGGTTGTGGCAGGGCCTCTTAAGGCCCTCCCCGAGACTGGCCAGGCCGGAGTCCACCTCACCCATGGGGGCAGGGAGGCCTCTCCTCCTATGCAGCAGGCCTGTCCAGATCCCAGCATTCCCACCCACCATGGAAGACTAGATACGCACCAGGAAAAAGAAGGGAGAACGGAAGCGTTTGGCAAGACACGTTGGGAATCACAGAAAAAGCACAGTTTGGTTTAACTGTTTACAGAGGACACGTATATTGTTCCAGGGCTCAGGCGTCTCACTTCTAAAGGTTTTTTGCCTTCTCTATTTATTATTTTCTAGATCTGGCCAGTGGCTCTGACACCAGACGCTGCTGTAGCCAGATGGCCAACAGTGCCTTGGACCGTGGACCATCGTGGCCAACTCAGCAAGAAGGGCAGGTGCCCTGGAGACGGCCGGGTTGGTCCTCGACACGCTGCGTGTTTACGCCTGTTATATTTGTTCCTTGGTCATTCCCCCATGCCCTTCCTGCCCCGCCCCCCACCCCTGCGCCTGCCACCTATGAGTTAATTTCTCTAGCTGTCTTATGGTGTGTCCAGTGTAAAATTCCAATTAACCTGATGCAACCTGTCCCTTTCTCAGCAGCAGCACCCACCGCCCACCCCTTCCTCTCAGTGATGGAAGCAGGGTGTGTTTGGGGCAGCAGGAGGAGGAAATTCTCCAGGTGGATGGGGAAGGGTCTGATCCAGGCTTCACCCTCCCACTTTGCACCCAATGGAGGTGGAGGGTGGGGCATGGCCATCTCCCTGACCTGTACCACCTCCACACCAAAGCTGTTCCCACCAGCTCTTTCAGACGACAGATGAGGCTAATGTACAAAATCTGCAGTGTCCTTTTCGCCTGCACCTTTTTTATAAGAATATATTGTAATACTAAAAAATATTAAATCCGTACCACCCTCACCTAGCCTGCCTTGAAACCTGTGTCTCCTTCCCAGGTGAGGATGTGAAGTGTGCTGGGGAGGGGGCAGAGCCCATGGGGTGTTGGGACCAGATCCTACCAGCGCCGGGAGCACCAACTGTTACAGCCTCAGGGATTCCGC EMBV3_02729 GCACTGGCGGGCGGATTCACCACTGAGCCACCAGGGGAGCCTATTAAATGGAATTTCTTT Gene BVT0102_113094 + 1 EMBV3_20448 GK000021.2:45340794-45354859 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43660 CCGGATATTTCTGATAGCCAGCAAAGAGCTGGAGGCAGAATTCGGGAGTATGGCAGAGCT Gene GeneID:514929|NCSTN:NM_001034475:275_cdna Constitutive 0 NULL GeneID:514929 3 GENE NCSTN MGC126920 nicastrin EMBV3_14105 TTAAAACTTTGGATTTCATAATGCTAAAAATGCTTCATTCTGTAGTTGAATCACTCACTG Gene GeneID:535653|ESD:NM_001076065:163_cdna Constitutive 3 NULL GeneID:535653 12 GENE ESD MGC139609 esterase D/formylglutathione hydrolase EMBV3_02017 AGGTTGAAGTTCCGACTAATACCTGGCTTCTCAACTAGTGTCGAGGGGGTGTTTGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_18924 AAAGCAGTCAGCAGAATCAGTGTTGCCTGGGAAGCCACAGCCGAACCCCACATCTGGTAA Gene GeneID:506408|ZNF786:XM_002687138:516_cdna Constitutive 1 NULL GeneID:506408 4 GENE ZNF786 NULL zinc finger protein 786 EMBV3_25588 TTCTAAGTTTGGTGTCTTATTATTGATCATCATACGTGAATGTAAATTTAAACCCTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42333 CCTGTAGAATGCAAAGGGTAGTCACCTCTCCTGACCCTGACTGGAGCCCTCTCAGATTTA Gene GeneID:614343|MRPS21:NM_001113307:154_cdna Constitutive 0 NULL GeneID:614343 3 GENE MRPS21 MGC137760 mitochondrial ribosomal protein S21 EMBV3_05218 AGTGCCCAAATAATGAAGGAAAACGGGTCACCAGCTGTAGGAAAGGACTGGGTGAGGCTT Gene BVT0102_349086 + 1 EMBV3_22363 GK000029.2:37684933-37695482 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10916 TTTACATGAAGAACTTGCAGGGATGGGCTCACGGCTTGTGGCAGATTGCCTCTCCCAACA Gene BVV0102_242128 - 1 EMBV3_19945 GK000015.2:55022697-55029089 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065132 1 XLOC_039854 NonCoding TCONS_00065132 XLOC_039854 NonCoding NonCoding - 15:55025702-55026329 - TSS48875 627 1 TCONS_00065132_1 120 0.551834130781499 1 0 0 0 0 1.32442591492236e-05 0 0 0 0 0 0 3.65101503307346e-06 0 0 0 0 0.00235893143952519 0 8.00346992316982e-05 0 2.29392781285274e-05 0 0 7.3158290239019e-05 0 0 0 6.54131437312652e-05 0 7.74260404258888e-06 0 0 noncoding 0 0 0 0 0.0662606772379556 0.658118230158433 0.0346548041119016 0.48685955825004 GGCAGGTGTTGGATTGTCTTGCAGCCAGCTCCCTCCTGCTGCTTATCATGCCACCCTTAGATCCATTCGGAGACAACAGTAAAACTCTCCAAATTTTTTGCAGTGGATCTTGGCTGCTGTAAGGGAGCTTTGGCTCTTTGAGGGAGATGTCCCTGTGACTGACAAACTGCTCTGGGAAACAGTTGATTAATATCGAATAGTACTCAGTATCCAGGCTCTTAGTGCCCTGGATTTTGTGTATAATGCTGTCAAAGGTGACCCACTGGGGAATGAGTGTTGGGAGAGGCAATCTGCCACAAGCCGTGAGCCCATCCCTGCAAGTTCTTCATGTAAATGCAAAGACCCTGGCCACTTCTTCTGGGCCAAATCTCAGTATTCTCTTGGTAGTGAGCAGCCTAGGGAGAGGAAGTAATATCTCTTTCCTGGAGCCGGTTTGCTTACTGTTCACTAAAAGTGTGGACTCCCCCCAAGCTCAGGGTTCTTTTCTTATGACACAACCTACTGTGCATGTGGGCACCCATCTAGGCCTACCTGTGTCAGTTTTGTTGGGGAAGGGGAATGGGGAACTAGCACAAACCTGTCCATTGCTGTTTGCTGCATCATAAGTAATAAAGTTCTTTGATCCAG TCONS_00059627 . 3' 942 TCONS_00059627 . 3' 1568 EMBV3_39395 CGAGAGAGCCCAGACCCTTGCCCGCGCGGTGTACGTGGCCCGACCTGTCCTGTGCCCTGG Variant GeneID:515662|EME2:XM_002697918:553_cdna 374^466 1 EMBV3_27948 GeneID:515662 25 GENE EME2 NULL essential meiotic endonuclease 1 homolog 2 (S. pombe) EMBV3_16239 GTAACTGGTTTCCATCTATGGGAGAAAGTAAATAATTGACCTTTAAATGATTGTTACAGT Gene GeneID:282661|CD47:NM_174708:38_cdna Constitutive 2 NULL GeneID:282661 1 GENE CD47 IAP CD47 molecule EMBV3_11992 CGGTCACCTCTTCGAGAAAGATCTCTAACCATGGAACAGTTTTCAAGGCCCAGCACTACC Gene GeneID:512887|LOC512887:NM_001101965:43_cdna Constitutive 1 NULL GeneID:512887 27 GENE LOC512887 MGC151606 hypothetical protein LOC512887 EMBV3_40934 CCGATTTGGATCAATTCTGTCTCCTCCCCGACCTGTTGGCTTTGCTCAACCGAGTTTTCC Gene GeneID:789845|LOC789845:XM_002684777:300_cdna Constitutive 0 NULL GeneID:789845 1 GENE LOC789845 NULL hypothetical LOC789845 EMBV3_06343 TGATGGAAATATGGACGCCTGTGACTCAAGAACTGAATATGGAGCCCACAGTGAACCGGG Gene GeneID:783762|VPS54:NM_001105460:155_cdna Constitutive 0 NULL GeneID:783762 11 GENE VPS54 MGC151871 vacuolar protein sorting 54 homolog (S. cerevisiae) EMBV3_30701 GTATTTGAAGCAAGTTCTCGGGCAAATGGTCTTCCTGGGTTATGTGGACATGCTTGGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40609 ACTTTTGAAACCTTGTGTGGGATTGATGGTGGTGCCGAGGCATGAGAGGCTAGTATGAGC Gene BVV0102_382599 + 0 NULL GK000021.2:50637737-51111405 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067293 TCONS_00247689 TCONS_00067291 TCONS_00069268 TCONS_00069269 3 XLOC_041400 XLOC_151397 XLOC_041906 Coding TCONS_00247689 XLOC_151397 NonCoding NonCoding LOC100848809 X:94310322-94332789 = TSS185425 960 2 TCONS_00247689_2 56 2 0.957357785097481 0.00617925726215495 0.00588252087492964 0.00673807254411039 0.00584750220459583 0.00549260945324135 0.00196738001614477 0.00478888146568262 0.00386305373838261 0.006764143179962 0.00621674123993736 0.00293301923003414 0.000845500435183721 0.0041246066882588 0.0102581652745716 0.00748323844628235 0.0798810952589448 0.021721321068732 0.0335590618087689 0.00265921374316163 0.00354328203348624 0.000724147848913076 0.0334936101582739 0.024626690753709 0.0257756349645191 0.00665423122911345 0.00524006393884736 0.00311267850419692 0.00613663810394471 0.00494057350807856 0.0100893025131582 XR_237771.1 TARDBP PREDICTED: Bos taurus TAR DNA binding protein (TARDBP), transcript 2e-104 383 96.58 0.241666666666667 XM_005263435.1 TARDBP PREDICTED: Homo sapiens TAR DNA binding protein (TARDBP), 0.0 1472 95.49 0.966666666666667 0 noncoding GGTTACTTCCTTTTTTAGTTTTGTTTTTGTTTAAACACTTGTCTCCCTTCATATACAAAAGTACAATATGAAGCCTTCATTTAATCTCTGCAGTTCATCTCATTTCAAATGTTTATGGAAGAAGCACTTCATTGAAAGTAGTGCTGTAAATATTCTGCCATAGGAATACTTCTGTCTACATGCTTTCTCACTCAAGAACTCGCCATCACGCTGCGCAGGCTGCGTCTTTGACGGTGGGTGTCCCATTTTTATCCGCTACTCTTTATTTCATGGAGTCGTATCAATGCTATGAATGCAAGGCTGTGATATGGAACCAGAAGGCTGTCTGAACTTTTGAAACCTTGTGTGGGATTGATGGTGGTGCTGAGGCATGAGAGGCTAGTATGAGCGAGAAAAGGAGAGAGCGTGTGCAGAGACTTGGTGGTGCATAATGGATATTTTTTAACTTGGCGAGATGTGTCTCTCAGTCCTGTGGCTTTGGTGAGAGAGTGTGCAGAGAGCAAGGATAGCAAATAATGTACGAATGTTTTTGCATTCAAAGGACATCCACATCTGTTGGAAGACTTTTAAGTGAGTTTTGTTCTTAGATGACCCACGTTAGCTGAATGTGTTAAGTGAAACGATACTTGTATTTCCCCTACCCCTTTGTCAACTGCTGTGAATGCTGTATGGTGTGTGTTCTCTTCTGTTACTGATCTGTAAGTGTGGTAATGTGAACTGAAGCTGATGGGTTGAGAACATGGACTGAGCTTGTGGTATGCTTTGCAGGAGTACTTGGAAGCAGAGTTCACCAGTGAGCTTGGGGTGTCTCAAAGCAGGGTGGAAGTTCTCATGTCTGTTAGCTACCCATAAGAATGCTGTTTGCTGCAGTTCTGTGTCCTGTGCTTGGATGCTTTTTATAAGAGTTGTCACTGTTGGAAATTCTTAAATAAAACTGATTTAAATAAAAAAAAAATAAAA EMBV3_18775 GTGATGGCTCCCCCTCACAGCAGTGGCATTTGGAATCTTAAGGTGGACGGAACAGTGACT Gene GeneID:534904|GALNT11:XM_002687051:162_cdna Constitutive 0 NULL GeneID:534904 4 GENE GALNT11 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) EMBV3_41520 TTTTGATCCGAACATCAACCCAACAATAGGTTTCGTGCCTTAGCGCCAATGTACTACCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03372 CAAGAGACACACGTCGTCTTGGTGCAACAATTGATGTAGAACATTCTCATGTTCGGTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17952 AGCACGTCCACTCTCTTGGCCTGGTATACCGGGACCTCAAGCCCGAGAACGTGCTGGTTT Gene GeneID:615123|SBK2:XM_002695406:25_cdna Constitutive 0 NULL GeneID:615123 18 GENE SBK2 NULL SH3-binding domain kinase family, member 2 EMBV3_28291 CTCAGCTGTAAAAGAAAGACTAACTCAGGTTGTCTCTGCAGAGGCTGTGAGACAGGTCGG Gene GeneID:512582|LOC512582:XR_084687:833_cdna Constitutive 0 NULL GeneID:512582 4 PSEUDO LOC512582 NULL similar to family with sequence similarity 62 (C2 domain containing) member B EMBV3_30012 CTGTTCTGGGACCTTCTGATGGAGGTCCAGGGCACACCCCTGGTGATAGCGCCCCTATAT Gene GeneID:532875|LOC532875:XM_002694867:836_cdna Constitutive 0 NULL GeneID:532875 18 GENE LOC532875 NULL similar to AFG3(ATPase family gene 3)-like 1 (yeast) EMBV3_13541 TTGTTTTCTTCTCTGCTTTTGTCGACTGGCGTGCCTGGCCATATCTGCAGGAGCGTTGTG Gene GeneID:614783|DAZAP1:XM_002689174:223_cdna UTR3_Alt 3 NULL GeneID:614783 7 GENE DAZAP1 NULL DAZ associated protein 1 EMBV3_27582 AGGTGACCAGCTCACAAAATTCCTGAGTGTGTAGCAGTTGGTTCTAGAGTAAGAGATGGC Gene BVV0102_047621 + 1 EMBV3_12912 GK000025.2:39828743-39998763 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149664 1 XLOC_091538 NonCoding TCONS_00149664 XLOC_091538 NonCoding NonCoding - 25:39876580-39877903 - TSS112199 1323 1 TCONS_00149664_2 96 0.0718065003779289 1 0 4.11358150422404e-05 0 0 1.25535126463107e-05 0 0 0.000312964535934233 0.000102825820378852 2.38553297386762e-05 0 3.28756635001256e-05 0 0 0 0 0 0 0 5.42021380527704e-06 0 0 0 0 0 0.0002880323386026 0 0 0 7.33876832859706e-06 0 XR_226468.1 LOC101903098 PREDICTED: Bos taurus uncharacterized LOC101903098 (LOC101903098), 2e-18 98.7 84.21 0.0695389266817838 0 noncoding 0 0 0 0 0.00436638215278151 0.971631685513288 -0.0144166455837346 0.859623307188016 GATGTCCTTTTGAAAGAAGGCATGGGGAGTTTAGATCAACAGAGGGGAAACTATTTTTGCTCAGTGTCTTTTGTTTTTTTAACCTCGTTGCCAATTGTGGGGTTTCCTTTCAGTTTTAAGTGAAGCCTTTTCAATAGAAGTGTAAATAATAATTACTTCCTCTCTATTCCTCTGACTCTGAACAGATATCAGGGGGTGACTTTGTGGCAAGGCCTCAGCTGACTGCAGAGGCGGCTGCTCCCTTCTGGAGCTGCTAGAGGTTCGGTGAGCACGGGGGCGAGGTGACCACCCTCGGCAGACGAGGCGACTATTCCCTAAAAGGCAGTGGGAGGAGGTTTTACCTCCCTTCACCTTTTCGTCTTGGCTCAGTGGACAAAGCTGGGAGAACTGGATATATTTACACAGAATGGAGAAAATAAATATTTCTTTATCCACACCCAGTGATGCAGATAAGCTTGCTCCCTCTCAAAAACAGACCTGACGTATAGTTTATTTCTGTGATGGAAATACTCTCATCACCGTCAATTTCAAGTTACTGATGGTTTGGTGACCAGCTCACAAAATTCCTGAGTGTGTAGCAGTTGGTTCTAGAGTAAGAGATGGCACATTTACAACATACCCCAGTATCTCTATCTTCCATTTACACCTGTCTAGTCACTCAGTTGTGCCCAACTCTTCTACGACCCCAGGGAACAGCCCACCAGGCTACTCTGCCCATGAGATTTCCCAGGCAAGGATACTGGAAGGGCTATCTATCTGTCTTTTATTTATCATCCATCTTTATCATTCATTCATCTATCTCTGTCTTCACTCTATCTACCTACTTAGCCATTACCCATCTGCATCTACCGATCTATCTTCATCATCTGTGGATCTGTCTAGAAAGATAGAAGTGTCTCAGAAACCCCAGGCACCCCACTTCCAAGCTGTTTGAGTCTTTCCAATCCAGACATGTGAAGAGAACCTTTGGGATGACCCCAGCTCCAGCTGGAAACATTACATTACTGTACAATCAGTGTGACAAGTGTCACCAAAGCTACATTCATGAAGTGCCACCAGGAGCCCAGAGGAGGACGTCAAGAGGGGCTTCCTGGAGAAGGGGGCACATCACTTGCGAGGAAAGGACCCACCTGGTCATGCTCTCTGCCTGAGGACGTGGTGTGTGAGATTTGCCAGTGAACAGGGATGGAGTTAATCTCATGTCATAAAGAGCTTGTGCCCTGATGCTTTGAAGGACTTTTTGAAATATCAAGAAACATAAAGAAAAATGTAACCAGTACAATGCCCTATTTGTCAGAATACAGGATTTAAACCATTAAAATG TCONS_00147399 TCONS_00147400 TCONS_00147401 . 5' 47839 TCONS_00147399 TCONS_00147400 TCONS_00147401 . 5' 47839 EMBV3_28182 AGCGCCGCGTCTTCCTGCTTCCCTACTCGGACAGCGGTGATCAGTTATGACTATCTTACA Variant GeneID:533372|ADCK1:NM_001076895:114_cdna 58^203 1 EMBV3_22118 GeneID:533372 10 GENE ADCK1 MGC142877 aarF domain containing kinase 1 EMBV3_14558 GTTCTCTCTCTGTCATGCTGGGTCAGGCTCGTTTTTAGGTCATTTGCAGGCAGACATTCC Gene GeneID:615443|MTMR10:XM_002696616:147_cdna Constitutive 0 NULL GeneID:615443 21 GENE MTMR10 NULL myotubularin related protein 10 EMBV3_29133 GATCTTCACCACGGCCAGGGATGCCAACACAAAATACGCTCAAGACTACAACCCTTTCTG Gene GeneID:511252|C25H7orf42:NM_001046081:290_cdna Constitutive 0 NULL GeneID:511252 25 GENE C25H7orf42 C7orf42 MGC134267 chromosome 7 open reading frame 42 ortholog EMBV3_02611 CGAGCTCAACATCATCGCCCTGAGCCACCGCAAGACCATGAAGAAGCGAAACAAGAAGAT Gene GeneID:538475|PDZD4:XM_002699743:192_cdna Constitutive 0 NULL GeneID:538475 X GENE PDZD4 NULL PDZ domain containing 4 EMBV3_28217 GAGAGAGCCAGCTGTGTAATCTAAACCTCTCCGATTATCCACCATGCGCCCGAAGCAACA Gene BVV0102_034243 + 0 NULL GK000003.2:24329713-24865808 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169181 TCONS_00169184 TCONS_00169185 TCONS_00169188 TCONS_00169183 TCONS_00169187 TCONS_00169180 TCONS_00169176 TCONS_00169178 TCONS_00169186 TCONS_00169182 1 XLOC_103303 Coding TCONS_00169181 XLOC_103303 Coding Coding TBX15 3:24316990-24361713 j TSS126741 3321 1 TCONS_00169181_3 420 6 0.925875408076562 0.00314201996142307 0.000539304207495402 0.00211675439675305 0.0012958859176477 0.00121774870684066 0.000961193095601546 0.00110576996251915 0.00113927601948103 0.00098428510424721 1.054200587303e-06 0.00022374681915424 8.94542449836534e-06 0.000651488854676681 0.000116016912761301 2.38571680129292e-42 4.01314742075449e-22 0 4.13529071613099e-43 0.00055320679709404 0.00173084372244128 1.7387358147426e-06 0 0 4.23483147931736e-45 0.00204353751531916 0.00131440237960949 0.0012496645875269 2.76020349078268e-12 1.18923492506187e-77 3.96209268337254e-05 XM_005204030.1 TBX15 PREDICTED: Bos taurus T-box 15 (TBX15), transcript variant X1, 0.0 5416 100.00 0.903944595001506 NM_152380.2 TBX15 Homo sapiens T-box 15 (TBX15), mRNA. 0.0 3438 85.55 0.905149051490515 TCONS_00169181_3 sp|Q96SF7|TBX15_HUMAN TBX15_HUMAN T-box transcription factor TBX15; 0.0 863 99.05 0.997619047619048 1 coding 0 0 0 0 0.385256541552737 0.235242510120486 -0.0393391036845903 0.409030362503376 CATGGCTCATTTTTGAGATATTTCAGAACTTGGCCCTAAGCCCATGAATTTGGAGATATGTGTATCACAGCTCCAAGTGGATGGTGGCTGGCAACGCTGATTCCCCCGTGCCCCCAAGAGTTTATATACACCCTGATTCTCTAGCTTCTGGAGATACTTGGATGAGACAGGTGGTCAGTTTTGACAAACTCAAGCTGACCAACAATGAATTGGATGATCAAGGACATATCATTCTTCACTCTATGCACAAATACCAGCCTCGAGTACACGTGATTCGCAAGGATTTCAGCAGTGACCTTTCACCCACCAAACCCGTCCCTGTTGGGGATGGAGTGAAGACATTCAACTTTCCTGAGACAGTGTTCACTACCGTCACAGCCTATCAGAACCAGCAGATCACCAGATTAAAAATTGACCGAAACCCTTTTGCTAAAGGATTCAGAGATTCTGGAAGAAACAGAACGGGACTGGAAGCTATCATGGAGACTTATGCATTCTGGAGACCCCCTGTGCGCACACTCACCTTTGAAGATTTCACCACCATGCAAAAGCAGCAAGGGGGCAGCACAGGCACTTCCCCAACCACCTCCAGCACTGGGACACCATCTCCTTCAGCTTCTTCTCATCTTTTATCTCCATCCTGTTCTCCTCCAACGTTTCATCTGGCCCCCAACACTTTCAACGTGGGCTGCCGAGAGAGCCAGCTGTGTAATCTAAACCTCTCCGATTATCCACCGTGTGCCCGAAGCAACATGGCTGCCTTGCAGAGCTACCCAGGGCTGAGTGACAGTGGCTACAACAGGCTCCAGAGTGGCACCACTTCGGCTGCTCAGCCCTCTGAAACCTTCATGCCTCAGAGGACTCCATCCCTGATCTCAGGAATACCAACTCCTCCCTCGTTGCCTAGCAACAGCAAGATGGAAGCCTATGGTGGCCAGCTGGGGTCCTTCCCTACTTCCCAGTTTCAGTATGTCATGCAGGCAGGCAATGCAGCTTCCAGCTCCTCATCACCACACATGTTCGGGGGCAGCCATATGCAGCAGAGCTCCTACAATGCCTTCTCTCTCCACAATCCTTATAATCTGTATGGATACAATTTCCCTACTTCCCCTAGGCTAGCTGCAAGCCCAGAAAAACTGAGCGCCTCTCAAAGCACTTTACTCTGTTCTTCTCCTTCCAATGGGGCCTTTGGAGAGCGGCAGTACCTGCCTACGGGGATGGAGCACGGCATGCACATGATTAGCCCTTCCCCCAATAATCAACAGGCGACTAACACCTGTGATGGCCGGCAGTATGGGGCGGTCCCAGGCTCCTCCTCCCAGATGTCTGTTCACATGGTTTAGTGGCCAGTCCCAGCACCACGGAGCCAACAGCAGCCGAGGCAGATCCGGAGTCTCCAGGGGCAGATCCTCCTCTCTGGGAGCCCAACGCCTTTGAAAAACAGGAACTGTGTATTATTATTATTATTACTTTCTGGAGGAGGAAAGCACATACCCAACAACAACAAGAGACACTTAAAGCCACTGAAGGAATACTTGCAGTGGAATCATCTCTGACTCAGTGGCCATTCTCCTGCCTTCCCAAATCTTAGCATCGTCTGTCTACTCAGAGTGGCCTTTGAAGAAACTGAATAATCGTTTTATAATGTTAAGGGAGATGCTAGCATGTAGCAGCCATGAAAAGTTACCCACACACAGATACATACCTACCTTTACATACACACATACATATGTGCATGCATACATACACACGTACATAAATATATTCATACACAAACTCATCCATACACAAACATACATGCACAGTGACTCGGAACTGGGTGAACTCTGTGGAGGGAAGCCCAGCATGGGTGCTTTCACCAAAAATTTGTCTATGTACAGCAGTAGACGGACTGGGTCAGCAGTAGCTGCCTGCCAACATTTCTTCCCTGCAGCTTACCCTTTTTCTGGAATGAACCATGTATCCTGAAACCCCTTCCCATCAATGGGGGTGGAAAGACGTCAGTACTACAACCGGACTTGGCTTCCTGAAAAAGATGGCCTTTGAACTTCGGCTCTCTTCGATTTGTGTGCTAGCATTGATGTTCCCAGTGGTGCCTGTGAAAAGAGGGAGTAAGAGCAGCTGAAAGAGAGAGAAGGAGAAAGAATAGAGAGCAAGAGAGAGGTGGAGAATAAGACTGAATGAGGAAGTGAGAGCAGTGATGAGAGTTTAAATTCACTGAGGAAATGGGTTTGGTGCTCACCCCTGCCCCCCAGGTTATGAAAAGAACCATGGAGTTGTTGAATAAACCTCTCTGGGACACTATGTATGGTCAGGGCACGGGTGAGAAGCACCCAGGCAGGGCATGAGTCTCAGTCCCACAGTTCTGACCACTGTGAGCCAGAAGAGAGGGGCACCACACAGGAAGTGCCGATTCCAGAGCACGCAGCCTGGCAGGGGACGGGAAACAGAAGGAGTGTGAGAAAGGAAGGGTTTTATAACCTCAACAGATGATACCAAGAACAGAGGCAACACAGGGAGGTCTGGCCTTCTGAATGCCAGATCCAGATGCCTGACCTGGATTGCTTTCCCCATTTCCCCTGTGGCAGGAGGAGTCCTGTCACCTTCCAGAGAACTGAGAATGGGCCTTCTAGAATACATCCTTCCATCTGCTCTTAGATCGCCACTTTTTTTTTTTTTTTAATCAAATAGTTCGTTGCAATTTTGAAGTTTTGGATTTCTCCTTTCATCTTTACCTTCCCCTTCAAATCCTTTAATGATAAGAAAAAGTGAAGTTTGGTGCCAGCTAAACTTTTTAAGTGGTGTGGAAATGAAGATAGTACCAAGTAAAAGAATTCAGATATTACTAAGATTTTTTTGGTTTTGAGGTGTTGTAGATAAATGTATTTATGTGCCTAGTGGGGAATCCAATATTATGAATATTAAAAAAGGGGGCAATAAAAAGGGTATGTAAAATATGTATGAAGAAAAGGTGTATAAAAATTTGCCCTTATGCACGGAACTCTGTTTCTAAGTGCCAAGCACAGAAAGCCGCTAAATAAAATCTTTGCAATTGTTTTCTGCGTATCCGTTCATATGGAATAAGAAAGCAGCAGCCCATGCCTTTGAATTGTGCTGTGCATAATAAGCACAGCAGTCTCATCTCTACTACTTAACATGATCTTGTTCAGAACACACGAAGTCTGTATTACCATCCTCATTTAATGATCAGTAACTAAGCTTCATAGGGACTGATTTATCCAGATTACACAGCCCGATGGAGAGAAAACTAGGACATGAAGCCAGGACTGTAGTGGGATACCTGGTTTCATGTTAGCTGCA EMBV3_42795 TGCCAAGGGCGTCGGCTTCCACGGTCGCGGCGGCTTCAAGCTCAAGCCCTACGTGAACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39553 GACATCCAGAATACCACCAGGCTTTTGTCCTCACAATCTTCTCCCTAGTCCCTCACTCCC Gene BVV0101_087255 - 1 EMBV3_26360 GK000015.2:38800772-38876121 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00064496 1 XLOC_039220 NonCoding TCONS_00064496 XLOC_039220 NonCoding NonCoding - 15:38821083-38821402 - TSS48239 319 1 0 0 0 0 0 0 0.000504600454600351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0606742817735812 0.636835642212449 -0.00758331923008102 0.904595463625675 ATTTAACACTCTAGCCTCTTTCTTTCTTAATATTGGCAACAATAACCACCACTTCACAGCCACAGTTATATCTTGGGCCTTCTCTGGACCTGGAGCCACTCCACTTAAGCTATCTTAAGGTCTAGTATATTATCATCTCCTGGCTCCCCAGCTCTCTCACTTTCACTCCCACCGTACCTCCCCCTTGACATCCAGAATACCACCAGGCTTTTGTCCTCACAATCTTCTCCCTAGTCCCTCACTCCCCTTAATATTTCCTTTTCTTCCCTACGCTGCCTAGATCTGATAATGCTGCATGAAAACCAGCCTTATTTCCCTC TCONS_00059038 TCONS_00059040 TCONS_00059041 TCONS_00059042 TCONS_00059043 TCONS_00059044 TCONS_00059046 TCONS_00059047 . 3' 20292 TCONS_00059038 TCONS_00059040 TCONS_00059041 TCONS_00059042 TCONS_00059043 TCONS_00059044 TCONS_00059046 TCONS_00059047 . 3' 20610 EMBV3_16652 CCGGCTGGGGCAACACCCTGAGCAGTGGCGGCAACGGACAGCTCCAGGGCATTGTGTCCT Variant GeneID:282603|PRSS2:NM_174690:565_cdna 455^616 1 EMBV3_28366 GeneID:282603 4 GENE PRSS2 TRYP8 protease, serine, 2 (trypsin 2) EMBV3_41471 GAAGCCTGGATCCTCTCTGGCCAACAGCAGCCCTGAGAATAGGTCATCTCTTGGCCCGGA Variant GeneID:512506|RANGRF:NM_001037460:18_cdna 450^556 4 EMBV3_39305 GeneID:512506 19 GENE RANGRF MGC133973 RANGNRF RAN guanine nucleotide release factor EMBV3_16615 GAGCTGATGATCTACTGCCTTGAGCATAATGAAAAGGTGGAAGTACCGATGATGCTGAGG Gene GeneID:518798|PTPN14:XM_002694255:233_cdna Constitutive 0 NULL GeneID:518798 16 GENE PTPN14 NULL protein tyrosine phosphatase, non-receptor type 14 EMBV3_02593 AGCCACTATCTTAGGTGCTGCTGGTTGTTGAGGCAGTAAGGAGTGAGTAGCAAAGCACGT Gene BVV0102_279821 + 0 NULL GK000029.2:22457441-22698837 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21251 TAGGTCTCTCGCTTCACCACCACTTAGGTCAGTCCCAGATTTGGCTGCATCTTGAATTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17348 GCACTCAGAAACAGCCTGACTACCATCCCAATTCCTGTGTTGGCGGCTCAGAGACACTAT Gene GeneID:787810|LOC787810:XM_002693196:371_cdna Constitutive 0 NULL GeneID:787810 15 GENE LOC787810 NULL similar to cOR56B2 olfactory receptor family 56 subfamily B-like EMBV3_00745 GTGCCTTCTCCAACATCCTTCGTGGCACAGGGGGTGCTTTGGTCTTGGTATTGTATGATA Gene GeneID:541168|SLC25A31:NM_001046500:56_cdna UTR3_Alt 2 NULL GeneID:541168 17 GENE SLC25A31 MGC134063 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 EMBV3_07717 AGAAGATCTCTGTGTGTTCCTTTCCACTCACTGCCCCACAAAGGGAATCACTATCCTGAC Gene GeneID:539847|ZNF383:NM_001102232:715_cdna Constitutive 1 NULL GeneID:539847 18 GENE ZNF383 MGC160035 zinc finger protein 383 EMBV3_02409 CCTTTGAAGAGGCCCCTAAGAAACCCAGGGAGTGTTTAGTCAAGGAGAACCAGAAATACA Gene GeneID:514435|DMRT2:XM_002689617:18_cdna Constitutive 0 NULL GeneID:514435 8 GENE DMRT2 NULL doublesex and mab-3 related transcription factor 2 EMBV3_14354 AAGTCTGGAACCAAGACGTAGAGTCGAAGGCTGTGCCACACTTACCTCATCTGTGCAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19860 AGGTGAAAATAAAGAGAAGCGAAAAGAAGTCCGTGCAGCCCTCCCAGGAGATGAAGCTCC Gene GeneID:513220|MKI67:XM_002698582:162_cdna Constitutive 0 NULL GeneID:513220 26 GENE MKI67 NULL antigen identified by monoclonal antibody Ki-67 EMBV3_24712 GGGCAGCCTCATTCAGCTCACCACCCAAAGACCTTAAAATGCACAACCATGAAAAGCCCA Gene BVV0102_056486 - 0 NULL GK000024.2:57487774-57873094 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09968 ACGACGTCACAGAACGTGGCTCGGAAGTTCATGGGACACTGACGAACACATTCTGCCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06232 CTGCTGTTCCACTAGCTTCTGTGGATTTCCCATCTGTTCCACTGGTGGAAACTGTGGCTC Gene GeneID:618495|LOC618495:XM_002695972:312_cdna Constitutive 0 NULL GeneID:618495 19 GENE LOC618495 NULL similar to keratin associated protein 1-3 EMBV3_19703 GCAGTGAGTCTTCTAAATTGGAGTGAGAACCAATGCACAGAATGCCTGACCTGCCCTTCC Gene GeneID:514494|CA5B:NM_001080908:26_cdna UTR3_Alt 2 NULL GeneID:514494 X GENE CA5B NULL carbonic anhydrase VB, mitochondrial EMBV3_28708 TGAAGGATACCTTGATGGGCTCATTAGTAGACTGGACATGCCAAGGAAAGAGCTTTGAGC Gene BVV0102_105087 + 0 NULL GK000005.2:107822808-107878849 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23778 GGTCCTGCCCTGTCAAAGAAAGTCAAACCGAAGAAAATTACTGATATTCTTGCAAAATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41886 CGGTGCAGAGGTCAAAGATGATGCATAACAGCCTCTCTAGACTGCCACCAGCTTCTCTCA Gene GeneID:789597|RAPGEF6:XM_002688963:116_cdna Constitutive 0 NULL GeneID:789597 7 GENE RAPGEF6 NULL Rap guanine nucleotide exchange factor (GEF) 6 EMBV3_07315 CTGTTCATAGTTTTTCCCTGTGTGTGCAGCGCTTTCCCCTTATATGGTAGATCACTGGCT Gene GeneID:508293|MOSPD2:NM_001101896:11_cdna UTR3_Alt 2 NULL GeneID:508293 X GENE MOSPD2 MGC159831 motile sperm domain containing 2 EMBV3_01368 TCATTGCTACCACATGCCAGGTTTGCAAGAGACAACCGGCACGAATAATCCTCACATAGT Gene GeneID:518047|SLCO1C1:XM_002687743:86_cdna Constitutive 0 NULL GeneID:518047 5 GENE SLCO1C1 NULL solute carrier organic anion transporter family, member 1C1 EMBV3_18118 TCCGGGCTCCACCCCAAATGCTGGCTGGGAAGGAAACATTCGAGCTGTTAAATGGAGAAA Gene GeneID:100138125|GCNT7:XM_002707726:405_cdna Constitutive 0 NULL GeneID:100138125 13 GENE GCNT7 NULL glucosaminyl (N-acetyl) transferase family member 7 EMBV3_14649 CTGCCCCTCTACTCCTTTCTTCCTGGACTCCTTAGGGCTTCGTCATGGAGATTTGAATGA Gene BVV0102_126711 - 1 EMBV3_18623 GK000014.2:2293396-2301586 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054146 1 XLOC_031955 NonCoding TCONS_00054146 XLOC_031955 NonCoding NonCoding - 14:632754-633635 - TSS39823 881 1 TCONS_00054146_1 36 0.30533484676504 1 0 0.00154592808751462 5.13256769870586e-05 6.6671454646987e-05 5.10565726388185e-06 0.000111369706053923 0.00024385083482633 5.26193419635488e-05 4.59033655516513e-05 0.000176592077604925 0.00293238722409138 0.000707872756171944 0.00127091391335698 0.000841183502049305 0.000983725524537984 0.000771989087276517 0.00487288798227137 0.000610550483823116 0.0196590540373616 4.06976182636799e-06 5.68772938325574e-05 3.44577927359288e-06 0.00220905820540651 0.00174233582246591 0.00242193585252357 0.000202731130723959 0.000409776537560464 0.000472692951195377 0.00158733294678468 0.000489293136344245 0.00100724407966801 XR_139643.2 LOC100847137 PREDICTED: Bos taurus uncharacterized LOC100847137 (LOC100847137), 1e-119 434 81.08 0.502837684449489 0 noncoding TTTACTGTTAAGGCTAAGTGAACAAGGCAAGAGAGAAACCCCAGAATTGAAAAGCAATTGACGGTTTTGAAAGAAACATGTGCAGGTGAAGCTCTCTTCCTTTTTGAGAGATGGTTAAATGCAAAATCTTGATTCAACACATATGACTTTTGTGCACTTTCTTTCAAATCTCCATGACAAAACCCTAAGGCGTCCAGGAAGAAAGGAGTAGAGGGGCAGACAAAAAGAGCAACCTTTCCCCTTGGTGCCATCGCAACCAGCTGCTTAGTTCCTTCATCTCAAGGACTATCATCTGGGCTTCTCTGGTTTGTCTGATTCTTGTTTCGGGGACCGTTTCTCGTCACAAGGCTGTCAACAGTGGGGGTGGGGGTGTGTGTGTGTGGGGGGGGAGCCCTTCTTTCCATTCCACATGAGACCCAGTGGACAATCCAGGCCCTGCCCACTGCATTGAGTGTGCAGCAACAATATCAACGGTAATGCCGGTGAACAATGCGTATTCCTGGAATCCACTCCGTTGACTACTGACTGTGTGTGGTGGTGGTCTGGAACCTAGACCTGGAAGCTTTCTGGATGATTGCAAATGACACCAAAGTCTGAGGACGATGGAAGATTGCCGGGGTCCTGCCCCGGCTGATCCAGGGTATTCGAAGCGGGGACGGTGTCGGCGACCTATTTATTTATTTAAATATTTTATCAAAGGATATAAAGAGTAATAGGATGAGGATAGCTCAGTAGGAAAATTCAGTGGAGAAAAGAGGCTGAGTAGCTTGGTTTACGCGGGAGACCAATAAAACTTCAAGACAAGAAGTTTGCACCACTTACGTAGGCCGCAGGCGTCCTTCCATTCTCCCGAAGGAGAGGAGACACTGAGGCCTCCCCGG TCONS_00050930 TCONS_00050931 . 3' 95370 TCONS_00050930 TCONS_00050931 . 3' 96250 EMBV3_02977 CTGGTGCCAAGATTATTCCAAAATGCATCTTATGGATGAGGGGCCTGGTGCCATTCTGAG Gene BVT0102_399483 - 1 EMBV3_14236 GK000018.2:58735243-58755297 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188848 TCONS_00250376 TCONS_00169788 TCONS_00091433 TCONS_00087263 TCONS_00169790 TCONS_00210913 TCONS_00065232 TCONS_00091303 TCONS_00087262 TCONS_00084921 TCONS_00055104 TCONS_00169786 TCONS_00169787 TCONS_00084513 TCONS_00078429 TCONS_00166151 TCONS_00070927 TCONS_00091898 TCONS_00140862 16 XLOC_114889 XLOC_153319 XLOC_103444 XLOC_056208 XLOC_052424 XLOC_129423 XLOC_039954 XLOC_056078 XLOC_051756 XLOC_032913 XLOC_051600 XLOC_047317 XLOC_100989 XLOC_042704 XLOC_056668 XLOC_085291 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_03259 TCTCAAGTCTAAGTGCGGGGCCGTTGGCATCTCTGAGCTCTTTGGCTTTGAAAAACTCGA Gene GeneID:783265|LOC783265:XM_002700140:138_cdna Constitutive 0 NULL GeneID:783265 X GENE LOC783265 NULL similar to Zinc finger X-linked protein ZXDB EMBV3_21249 GGTAAAGGCTCTTTGGCCAGACATGTGGACCCATCAAGAGTACAGAGCTCAAATCAAGAG Gene GeneID:784535|LOC784535:XM_002686784:107_cdna Constitutive 0 NULL GeneID:784535 4 GENE LOC784535 NULL similar to RIKEN cDNA A530099J19 EMBV3_27769 CTAACTGATCTCTGGACTGTACAAATGGTTGTCCTTCCATTGAGGAGGTGGGGACAGGCA Gene BVT0102_134311 + 1 EMBV3_19096 GK000007.2:13506236-13543658 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219031 1 XLOC_132350 NonCoding TCONS_00219031 XLOC_132350 NonCoding NonCoding - 7:13521437-13524721 - TSS163029 3284 1 TCONS_00219031_1 153 0.606881851400731 1 0 9.52895479584877e-05 1.22392697266903e-05 1.12716266791931e-05 0 4.51021033143606e-06 1.08924081247829e-06 0 0 0 0 0 0 0 2.86479360806989e-06 0 0.00120637614018168 0.000535883177796534 0.000351456058963504 8.07931093245361e-05 3.06578121269728e-05 9.29024900223651e-05 0.0003705805053637 0.000310084323404063 0.000260352098114121 0 1.07269662296309e-05 0 0 2.36521553349186e-05 0 XR_231610.1 LOC101906392 PREDICTED: Bos taurus uncharacterized LOC101906392 (LOC101906392), 0.0 2888 100.00 0.48721071863581 0 noncoding 0 0 0 0 -0.177284426713243 0.245164220526336 -0.0461207698126078 0.365818819182861 GTTTCTTGGTGTGACGGAAGCTTCCTGCAGATGGGTAGTTGGTGACGGTTGCCCAACCTTGTGTTTCTCCTAAATGCCAGGGCCTTGTACACTTTAAAATGGTTAACTTTATGTTCATATATTTTGTCTCCATTTTTTTTAAAAGGAAAGAAGAAAAAAGAAAGAAAGATAGGAAAGTTAAGTGTGCAGGCTACACTGAGAAAAGAGATGAGGGGTCAGGGACACTGAGGTATGAAGTTGGGGCACATCTCCAGACCCAGACAGTGACAGATGATGGCACCAGGGAGGGACAGGGAAAAGCAGAGGAAAGGGAGAAACAGGAGGTAGGGTCCCATGACTGGTTAGATGACAGGGTGGTGGTGGTTCATGGGATGCTTCTGTCTCATCTGTCAGCTCTGGTGGGTGGCCAGGGGTGGGGATTACTCGAGGCAGATCTAGGCTTCCTGTCTGTGACCCTGCTGTGCCTCCATCAGCCTGCCAGTCTCAGCGCTCAACCCCATATCACCTTGAAGACACGAACGTCCCCTCCCCGGGGGGTATCCCCATCACCCTCTCCCTAGTGTTAATCATCAGAACCTTCTGCGCGTCCCCATGCCCCTCCAACACCGACTCCTTCTGACCTCTTTGCTGTGCCAACCAGTAGACACCCCCAAAAGCCCCAAGTCAGCATCAGCTGACATTCAGACCTCAGGCTCCTTTAGAGCAGGGGTCTACAAAGATCTGGAAAGGGCTGGACTGGAAATATTTTCTGCTTCAAGGGCCAGGCTGTCTCTGTTGCAATGACTCAATTCTGCTTTGTAGCATAAAAGCAGCCCGGGATAATAGGTAAACAAATGAGCACAACTGTGTGTCAATAAAACTTTATTTATGGGACTTCCGTGGTGGCCCAGTGATTAAGACTCTGCCAGTTCGATCCCTGCCGCGAGCCACTGAACGACTAAGCCCAAGCTCCACAACTATGAAGCCGAGGTACCTAGAACCTGTGCTCTATAATGAGAGAAGCCACCACAATGCCCCTGCTCGCTGCAACTAGAGAAAGCCCATGCACAGCAATGAAGGCCTACCAAAGCCAAAACATAAATTAAATTTTAAAAACAACTTTATTTATGGACTCTGACTTTTCAGATAATTGTTTTATTTTTTATTTATTTGACTGTGCCAGGTCTCAGTTGCAGCACCTGGGCTTTCCATCTCCATTGCAGCATGAAGGCTCTTTTAGTTGTGGTATGCAGTATTTTTAGTGGCTACATCCAAACTCTTAGTTACAGCATATAAACTCTTAGTTGGGGCATGTGGGACCTAGTTCCCTGACCAGGGATTGAACTCAGGCCCCCTGCCGTGGGAGCACAGAGTCTTAGCAAATGGACCACCAAGAAAGTCCCATGGACTTTTTAATTGAAATATATTTGACATGTAACATTGTATAAATTTAAGGTGTCCAACATTTGATACATTTATATAGTATAACTGACATATATTGTAATATGGTTGCGATTGTATCCATAATTAGCACCTCTGTGAAAGTGTTGGTCTCTCAGTCATGTCCAACTCTTTGTGATCCCATGGACTGTAGCCCACTAGGCTCCTCTGTCCTTGGAATTCTCCAGGCAAGAATAATGGAGTGGCTAGCCATTCCCATTTTCAGGGGATCTTCCCAATCCAGGGATCAAACCTGGGTTTCCTGCATTGCAGACAGATTCTTTAACGTCCGAGCCACCAGGGAAGCCCAGATGTTATATAATCAACATTTCTTTTTAGTGGTGGAAATAGTTAAGTTGCTAGTCTCTTAGCAAGTCTGATGATTATAATACAACATTTTAACTTGTATTTACTCTTCTGTGCATCTGTGGAATTCTAGGATTTATTTACTACTCAGTCCAAGTTTATACCCTTCAGCAAAGTCTGTTCTATCCCCCCCAGCTCCTTGGTCACTGAAATTTGAATTGTAGATCATTTTCAAATTGTGAATTGTTTTTTCCAGCCATTTGAAAATGAAAAGGCCATTCTTAACTCACTGGCTGTACAGGAACAGGCAATAGGCTGCATTTAGCAACCAAGGCTGTGGATAACTCCAAACTATCTCTTGCCCACATTTGCCCCTTATAATAGTGTATATCAGGGAGTCTTGGGTATCTTTATAAGGGCACTAATCCCATTCACAAGAGACCCACCCTCATGACCTCATTCCCTTCCAAAGGCTGTACCTCCTAATATTATCACCGTGGTGGTTAGAATTTCAATACAGAGTGAGGGGGTGGAGACACAAACATTCAGACCACAGTTGTGAGTATCCAGGGTTTTTTTTAAATTAGTATTATTGGCAATTCTCTGGTGGTCCATTGGCTAAGATCCCAATACAGGGGCCCGGTTCAATTCCTTGTCAGGGTACTAGATCCCATGTGCCACAACTAAGACCCACTGCAGCCAAATAAATTAAAAAAAAAACAACTGCTCTGAGACACTGCCTTGACACCTGGGATACCAGGTCTCGTCATCACGGCCACAGTCAGAAAACAGAAAACTCCTAAGCACTCCCAGGGTCCCCAGCTGCCCAGGAAGAACAGGTTGGCAGAGGCCAGATGAGGGGCTTTCCAGTGACAAACACAGACCTCCCTTCCACGCCTCCACTAGGAAGAATATTCAAACATGTCCCTGACTATCTTTCTCAATTAGCCATCACTCTGCTTTCCCCCAGCACTCTCTCCTCTCATAACCCCAGTGTATTTTCTTAAAGGTGTTTATGTTTTTCAGAGCTTATTAGTGTATTTAAGCATCAAATATTGCCTGTCCCCACCTCCTCAATGGAAGGACAACCATTTGTACAGTCCAGAGATCAGTTAGGAATAAGTCTCGGTTGGGGTTGTTGTTGTTGTTCAGTGGCTCAGTCATATCTGACTCTTTGCTACCCCATGAACTGCAGCATGCCAGGCTTCCCTATTCTTCACCATCTCCCAGAGTTTGCCCAAACTCATGTCTATTGAGTCAGTGATGCCATCCAGCTATCTCATCTTCTTCTGCCCCCTACTCCTCCTACCCTCAATGTTTCCCAGCATCAAAGTCTTTACCAATGAGTCGGCTCTTTGCATCAGGTGGTCAAAGTACTGGAGCTTCAACTTCAGCATCAGTCCTTCCAATGAGTATTCAGGACTGATTTTCTTTAGGATGGACTGGTTTGATCTCCTTGCAGCCCAAGGGACTCTCAAAAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCTGGGCTGGGTGGTCATAACAATTTCACTCTGCCTGTGTAG TCONS_00211848 TCONS_00211849 TCONS_00211850 . 3' 15203 TCONS_00211848 TCONS_00211849 TCONS_00211850 . 3' 18486 EMBV3_31803 TCTTACAGAGCACCAACATGGCCTTTGGGAAGGTCACAGAGGAGACTGTCTACACCTGCA Gene GeneID:508389|RFC5:NM_001075358:93_cdna UTR3_Alt 3 NULL GeneID:508389 17 GENE RFC5 NULL replication factor C (activator 1) 5, 36.5kDa EMBV3_34515 GGCCAGAATTTGACCACACACAGACCTCGTGTCTCTGAAGGGATTTATTCTTTGGAGGTC Gene BVV0102_132636 + 0 NULL GK000025.2:27154028-27158932 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146722 TCONS_00146721 TCONS_00146724 TCONS_00146723 1 XLOC_089187 Coding TCONS_00146722 XLOC_089187 Coding Coding ZNF629 25:27157173-27163765 j TSS109626 5262 1 TCONS_00146722_5 868 0.0281261877613075 3 0.202093764223942 0.00103703623298978 0.000107440233479813 0.000200777424936267 0.000394916083056246 0.000661870871398134 0.000249630406482705 0.000194396044669008 0.000404556354502575 1.70025887776155e-09 4.14260462822506e-05 8.69837688913183e-07 5.84765546914035e-10 2.65546875528574e-05 8.89442618580109e-06 0.000206639642603873 3.49957814060443e-05 0 8.29901480597495e-11 0.000352839155175684 0.000690744253630688 6.88828498942617e-05 2.32120019126018e-11 5.21977663427962e-06 4.16513444525065e-06 0.000592215446447543 0.000368721697467559 1.6147402951974e-13 2.58972831099727e-11 1.85787634283761e-06 1.56273027178687e-11 XM_005224962.1 ZNF629 PREDICTED: Bos taurus zinc finger protein 629 (ZNF629), transcript 0.0 9395 100.00 0.989737742303307 NM_001080417.1 ZNF629 Homo sapiens zinc finger protein 629 (ZNF629), mRNA. 0.0 4792 80.67 0.972253895857089 TCONS_00146722_5 sp|Q9UEG4|ZN629_HUMAN ZN629_HUMAN Zinc finger protein 629; 0.0 1607 91.60 0.998847926267281 10 coding 0 1 1 1 0.0691452463272279 0.550441925966235 0.015028451892502 0.751953418948627 CTCCTGTTCCTCTGCTGCCATCCTCTCCAAAGCACTGGACCAAAGAGGTTCTCTAGGAGCAAGGGGCATCTCATTCATTCATCCAGAATTTACTGGACACCTAGGTCCCTGGAGCACTGGACAGCCCTGAGTTCCGGGATGGAACCTGAGACGGCGCTCTGGGGCCCAGATCTGCAGGATCCTGGACAGAGCCCGGACGATGGTCACCCAGGTGCAGAGAGTGGGAACGAAGAGGAGAGCACTCAGCATGAAAGTTCTGGGGAGGAGGTCATCTTGGGAGATCCAGATCAGAGCCCAGAATTCAAGGACCCATCAGAGATGCCCCTGGAGACACCCTCCCAGGATGCCTCTGGCCCCCAGGATGCCCCGGCCCCGCTGGGTCACGCCAACCCCTCGGACCACCAGACCCCTCTGGACACCCCCTCCCCCGAGGTAGTCCCGACCCCGTCAGACTGGACCAAGGCCTGTGAGGCCAGTTGGCAGTGGGGGACTCTGACCACCTGGAACAGCCCCCCGGTGGTCCCGGCCAATGAGCCCAGCCTGCGGGAGCTAGTGCAAGGCCGCCCGGCCGGCGCCGAGAAGCCCTACATTTGCAATGAGTGCGGCAAGAGCTTCAGCCAGTGGTCCAAGCTGCTGCGGCACCAGCGCATCCACACGGGTGAGCGGCCCAACACCTGCTCCGAGTGCGGGAAGAGCTTCACGCAGAGCTCGCACCTGGTGCAGCACCAGCGCACGCACACGGGCGAGAAGCCCTACAAGTGCCCCGACTGCGGCAAGTGCTTCAGCTGGAGCTCCAACCTGGTGCAACACCAGCGCACGCACACGGGCGAGAAGCCCTACAAGTGCACCGAGTGCGAGAAGGCCTTCACCCAGAGCACCAACCTCATCAAGCACCAGCGCTCGCACACAGGCGAGAAGCCCTACAAGTGCGGCGAGTGCCGGCGGGCCTTCTACCGCAGCTCGGACCTCATCCAGCACCAGGCCACCCACACGGGCGAGAAGCCCTACAAGTGCCCCGAGTGCGGCAAGCGCTTCGGCCAGAACCACAACCTCCTCAAGCACCAGAAGATCCACGCCGGTGAGAAGCCCTACCGCTGCACCGAGTGCGGCAAGAGCTTCATCCAGAGCTCGGAGCTCACCCAGCACCAGCGCACGCACACGGGCGAGAAGCCCTACGAATGCCTGGAGTGCGGCAAGAGCTTCGGCCACAGCTCCACGCTCATCAAGCACCAGCGGACTCACCTGCGCGAGGACCCCTTCAAGTGCCCGGTGTGCGGCAAGACCTTCACGCTGAGCGCCACGCTGCTGCGGCACCAGCGCACGCACACGGGCGAGCGGCCCTACAAGTGCCCTGAGTGCGGCAAGAGCTTCAGTGTCAGCTCCAACCTCATCAACCACCAGCGCATCCACCGCGGCGAGCGGCCCTACATCTGTGCCGACTGCGGCAAGAGCTTCATCATGAGCTCCACCCTCATCCGCCACCAGCGCATCCACACGGGCGAGAAGCCCTACAAGTGCTCCGACTGCGGCAAGAGCTTCATCCGTAGCTCGCACCTGATCCAGCACCGGCGCACGCACACGGGCGAGAAGCCCTACAAGTGCCCTGAGTGCGGCAAGAGCTTCAGCCAGAGCTCCAACCTCATCACGCATGTGCGCACGCACATGGACGAGAACCTCTTCGTGTGCTCCGACTGCGGGAAGGCCTTCTTGGAGGCGCACGAGCTGGAGCAGCATCGGGTGATCCACGAGAGGGGCAAGACCCCGGCCCGAAGAGCTCAGGGCGACGGCCTCCTGGGGCTCGGGGACCCTGCCCTGCTGACCCCACCCCCCGGAGCCAAACCCCACAAGTGTCTGGTTTGCGGGAAGGGGTTCAACGACGAGGGCATATTCATGCAGCATCAGAGGATCCATATTGGCGAAAACCCCTACAAAAATTCGGACGGCCTCCCTGCCCACCCCGCCCCCAAGCCGCCTCAGTTCCGGTCCCCCAGGCTCCCTTTTGGGGGGAATTCCTTTCCCGGTGCTGCGGAGGGCAGAGCCGACCCGCCTGGACAGCCCTTTAAAATGCCCGACGGGCAGGAGAGTTTCAGCCACAGGCTGGGGCTGCCCTCCTCCAAGTCCTACATCTGTTCGCACTGTGGCGAGAGCTTTCTGGATCGCTCGGTGCTCCTCCAGCATCAGGTCACCCACGGCAACGAAAAGCCCTATCTCTTTCCCGATTATCGGATTGGCCTCGGGGAAGGGGCGGGGCCCAGTCCCTTCCTCAGTGGAAAGCCCTTTAAATGCCCCGAATGCAAAAAAAGCTTTGCCCTCAGCTCAGAGCTGCTGCTGCACCAGAAAGTTCATGCCGGCGGGAAAGCCCAGAAGAGTCCAGAGCTGGGGAAGAGCTCCTCCGTCCTCCTGGAGCATCTCAGGAGCCCCCTGGGGGCCAGACCCTACAGCTGCTCAGATTGTGGGGCCTCCTTCCTCGATCGCCTGGCTCTCATCCGGCACCAGGAGACCCATACTCAAGAAAAGTCCCCCATACCCGAGGACCCCCTCCCAGAGCCAGCCACCCTGTCCACAAGCCAGGAAGGTGAGGGAGAGGCCCCCGCACCCACAGAGAGCAGCAGCCATGAGGAAGGGGGAAGCCCCAAAACCAGCTTGGAAGAAAAGCCCTATTTGTGCCCCGAGTGTGGAGATGGCTTCACAGAAGTCTCAGCCCTCCTCCTCCATAGGAGCTGCCACCCCGGGGTCACCCTGTGAACAGGGTCTGGAGACCAGAGGCCTCTCTCCTGAGAGGAACACTGGGTCTCCTCAAAAGTTACGTGGGGAAAGGAGGAAAACCCTATCAGATTGTAGAGAAGAAGAGGATAAAGAATTGTGGGTAAAAGTAGTGCTTTTACATCAGTGATGAATAACCCTTTAAAATTGTTGGTGGGAACCACTTATAAGGCAGTAGAGAAAAACTGTTGGGTTAGAAACCCTATAAATATGTAGGAAAAAAAAAGCCCTTTAAGTCTGTAGCAGAAAAACCCTATAAACCATAGTGGATAAAAGCCCTATTAATTGTAGGAAGAGGTCCCAATATGTCTCTAGACAACCCTATAAAACTGTATTGAAAACCTAGTGAAACTATAGGGTCGGGGAAGCACAGGGAATCCGACAGCATCGACTTGGGAGGAATGACCCTTAGAAGGTGTAGAAGGACCTCCCATGAACTCACTCCACAGCGTTCTCTCCCCCAAGAGTATGGGAGGGAGCCCGTCTGCCAGAGCCGTGGACGATGACACCAAGGAAAATGCTGGGCTGGGGGAGGAGCGTGGGAATGAGGAGGAAACTTCTGATTCCCCAGAGGAGAAATGACCCAGGAACTGGGAAGAGAAGGTCCAGTTCAAGGCACTGGGGGTTCTGTGGGGGACGAGGGAAGTCTTAGATGATTGTGTGTGAGAGAGGGAGAGGCCCATGGAACTCCTGATCAGAAAGAACCCCCAAAATGGGAAGAAAAAAACATGTCCAGCCTGTTTAAAGGCCAAAGTTTGGGGAGCATAAAAGTTTTAAGTGTAAGGAGACTAGGAAACCACCACAAAAATTAGGAGGGAAGAGTAGGGTGATTTATTAGAGTGCTTTGAGGAAAGCGAACCAAGGTGGAGAAGCCGTTGAGATGGAACCCAACAAACCCCAGGCTGCCCAGTCCTCCCTGTTTCAGAAGCTTGTCAAACTGCAAGTACAAGCAGATCCTAGCTCAGGCCACCAGAGTTCCCCACATCCCCGAGCCAGGCAGGACTCCCCTCTCCCCAGCTCAGCTGGGGAACATCGCTGCGAGGCCTCCAGGGATGGAGGGTCCCTCCTGCCACATTCTCAGGTCTCACTGTCGGGAGGCTTCTCCTGCAATCTAACTGCCACCAGTCCTGAGGCTGTGGCAGCCCATTTCCTTACATTCTGTCCTCAGAGAGGGAGAAGCCTTGTTAGTCGACCTCCAAAGAATAAATCCCTTCAGAGACACGAGGTCTGTGTGTGGTCAAATTCTGGCCAGACTTCTCTTAAGAGCACCACCTTTGATTCTCTGGCAACAAGGGACAGCAGAATGGACAGAATTGAGAGCCTGGATTAGCCAGCAACCTGATTTTTAACCTCATTCTCTCACGTGAACTGTTAGCAAGGCTGCAAGAGGACGAGCCAGCAAGAGGACACGTAGTGATGGGTGTCCAGATACCCCACAGACTGGACCGTGGGTCCCTGAAGAGTACACGGAGACCTGACCACCTTCCTCACCTGGGTACCTGGAGCCTTCTGAGGTTGCAGCAGCCCAGCCCAACTGTGGTCTTGGAAAGAAGACAGAGTCCACCCACTTGGCTCCTCTCCTCCTTAGCCAGAAACCTTCAGAGGGAGACAGAATGATGAGAAACACACTCCCTGGCCAGGCCCGGCTCCTGTCCTCACACACTACGTACAGTGACATACTTTCATTAACCCTGCCAAACCTGCTCCCGTGGTGGGGAATGAGACTGTTGTCCTCTGAAATGGTCGAAGAGCCAAAACTCTTGAAACATCCATAACAAGAACCCCACCCCTTAACCCCAGAGACCCTTAAAGGAGGACAGGACTCCCTGTCCAGAGCTGGGTCTGGAGGAAGTGCCCACTGACACCACGTCGGCCCCAGTAACGTGCTGTGGTTCAAGTAGAACTGAGATGCCAGGTGGGGAGTCACGTCCCTGTAGAGGGTGACCCGGCTTCCTACAAACCTGTGGAAGAGACCTCTGATTCCATTACCTAAAAGTTCAAAAGGTGAAAGTCCTTCACCCTCCGTCTGTCCTGTTCCCAAAGGGATGACCCTCAAAGGCTGAAATCTAGAACACTGTAGGAGGAAAAGCCTAGGCCTGCTGGGGAGAAGGGAAAGGCAGGTCTTGGGGGACTGAGGAGACCCTGATTATATCTGCATAAAGCCCCACCCACCCAAGTGCCAGGTCAGAAAGCGCCACCAGGAGGGGAGAAGGAGCCTGCCTGCCTCTACTGACAGCATGGACCGAGGAGGCGTCCCTCTGAGACTGAGGAAGAGGAGACCATTCTCCAAGCAGGTTTTTTCTTTCCTCTAAGATGGCAGCAGAAAGAAAAATCATTTGTAGAAACAAACCCCCTGTAAAACTAGAAGCAGATCCTCTTGGAAATAGGCCTGAGGAATCAGTCTCCAGAAGGGTCCGGGAGAGCAGCTTTTGGGGCTCAGGGCCAGTCCGGGGGAAGATGGGTGGTCAAGGCTGACTGAGGGCCTTTCGAGGCCTCGGG EMBV3_43053 GCTCCTGACTTCTGTGTGAATATCGCAACCCTGATTTCCTAAGGCGAGCATCTCTTTTTC Gene BVV0101_065833 - 0 NULL GK000019.2:57334740-57430860 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09847 AACATGCTGTTTGAGAGCATCCAGGAGGGCAAGTATGAGTTTCCAGAGAAGGACTGGGCC Gene GeneID:538519|MKNK2:XM_002688958:101_cdna Constitutive 0 NULL GeneID:538519 7 GENE MKNK2 NULL MAP kinase interacting serine/threonine kinase 2 EMBV3_38668 GGGGGGCCAAAGACTGAATAACATCCTTCCTCAAAACTAGGAGGTTCCCAATACCTGGCT Gene GeneID:512005|LOC512005:XM_002695158:749_cdna Constitutive 0 NULL GeneID:512005 18 GENE LOC512005 NULL similar to phospholipase A2 inhibitor beta subunit EMBV3_14678 CTCTATTGCCATTTTTTAAAAGAAATCTGGATAGAAATCATAACTATGAGGTGGTAGAGG Gene GeneID:509250|ZNF266:NM_001104968:2_cdna Constitutive 1 NULL GeneID:509250 7 GENE ZNF266 ZNF426 zinc finger protein 266 EMBV3_00310 AGGAGCGTTACCATTTTTTGTTGCTGCTGTGGCTTAATAGAGGAGATGGGTGCTGCCAGG Gene GeneID:514493|DTD1:NM_001038104:52_cdna Constitutive 0 NULL GeneID:514493 13 GENE DTD1 MGC134429 D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) EMBV3_40683 TCGGCAATGGAACCCAGATTTACGTCATTGCTAAAGAAAAGAAGCCCTCTTACTACAGGG Variant GeneID:281732|CTLA4:NM_174297:58_cdna 452^561 1 EMBV3_09558 GeneID:281732 2 GENE CTLA4 CD152 cytotoxic T-lymphocyte-associated protein 4 EMBV3_38764 CCATCACCATCTCCTGAGAAGTACACCTAGGGAAAAGTCCCAATGATTCCAGTGCCTTCC Gene BVT0102_153686 + 0 NULL GK000027.2:24104605-24193121 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15809 TATGGACTTGAGACCACACTGTAACTGCAATCCTGTTGCCTAACGAAGGCCAGTCACGGG Gene GeneID:613945|TMEM42:NM_001076298:155_cdna Constitutive 0 NULL GeneID:613945 22 GENE TMEM42 MGC137275 transmembrane protein 42 EMBV3_16271 CAGCTGGCCACGAGGTCCTGAAAAATGCCTCCCAACATAAGGCTGCTAAACACATAATCG Gene BVT0102_155748 + 0 NULL GK000013.2:78484754-78628601 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12902 CTATCCATGGAAATTTGATCTCTAGGCAAAGCCTTCCCCTGTAAGTGGGAAACTGCCTGG Gene BVT0102_280224 - 1 EMBV3_35373 GK000026.2:16919270-16954142 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39235 TCACTTCTGCCTGCAGCCCCTGGGCGAAGAACATCCATGACCAAGAAAATTGGTGGGAAA Gene GeneID:100138447|GJA10:XM_002690190:24_cdna Constitutive 0 NULL GeneID:100138447 9 GENE GJA10 GJA10 gap junction protein, alpha 10, 62kDa EMBV3_35620 CCGCATCCTCTTTCTCCTATCGGTTCTCGGGTCCGTGATGACAATCTTTTCTCTTTGGAA Variant GeneID:399681|EMD:NM_203361:31_cdna 267^478 3 EMBV3_40182 GeneID:399681 X GENE EMD MGC128971 emerin EMBV3_25058 TTCCCAGGGTACTGGCCGGCCTTGGAGCCCAGCACTTTCTCAGGCCCTTTATTAAATTTC Gene BVV0102_290116 + 0 NULL GK000003.2:108808992-108854244 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15742 GAACTGAACAGTTTGAACCAGAAATTAGAGAAACAGGCACAAAGTTACCACACTCAGCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17922 CAGGATTTGCTTGTTTATGGTGGTGGGTTCCTGGGTTGGTGGCTCCTTGGATGGGTTCAT Gene GeneID:615374|LOC615374:XM_002689123:93_cdna Constitutive 0 NULL GeneID:615374 7 GENE LOC615374 NULL similar to olfactory receptor, family 2, subfamily T, member 2 EMBV3_27741 GAAAGTGAAGGAGACCCTCGTGGAACAACGGAGGAAGAGAAGCAAAGAGAACTCTATCCC Gene GeneID:100336661|LOC100336661:XM_002690037:37_cdna Constitutive 0 NULL GeneID:100336661 9 GENE LOC100336661 NULL interphotoreceptor matrix proteoglycan 1-like EMBV3_25816 CCAGGTCAGGCTTTTGTGCCCAAACCAGAGAATGTTATTCCCTGAAGCTCGGCGATTAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31838 GGGAGCTCATAGTGCTGATTGGGATCTGTCATCTTAGCATCTTAGGGTGTTAGCTGGGTC Gene BVV0101_039652 + 0 NULL GK000010.2:12302425-12321151 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016023 TCONS_00016018 TCONS_00016027 TCONS_00016019 TCONS_00016025 TCONS_00016026 TCONS_00016024 TCONS_00016020 TCONS_00016017 TCONS_00016022 TCONS_00016021 1 XLOC_008612 Coding TCONS_00016022 XLOC_008612 Coding Coding DPP8 10:12317650-12374933 j TSS11179 6898 1 TCONS_00016022_6 882 0.0358074804291099 20 0.879927376837401 0.0020223506573189 0.000913217676057397 0.00282198592669143 0.00151516044006248 0.00250998833264623 0.000551355439660564 0.000689783317059314 0.000157154930252592 0.00243443603566017 1.40698169608068e-12 4.52025343150468e-05 2.81745013662409e-09 0.000191595534102603 0.00013042003069876 0.00184232926936887 1.14768645200259e-17 1.20699117908149e-20 2.13240284376682e-26 0.00103611747839812 0.00222891432560154 0.00151430824910901 7.91861885293269e-69 1.54033879063576e-15 1.61035027278879e-18 0.00295473351183467 0.00104810754337482 0.00149290007738515 7.1429546913841e-07 1.47270784433019e-09 6.41784856008967e-17 XM_005211351.1 DPP8 PREDICTED: Bos taurus dipeptidyl-peptidase 8 (DPP8), transcript 0.0 1.215e+04 99.99 0.977094810089881 XM_005254500.1 DPP8 PREDICTED: Homo sapiens dipeptidyl-peptidase 8 (DPP8), transcript 0.0 6210 85.90 0.766888953319803 TCONS_00016022_6 sp|Q6V1X1|DPP8_HUMAN DPP8_HUMAN Dipeptidyl peptidase 8; 0.0 1811 98.19 0.998866213151927 4 coding 0 0 0 0 -0.485911688663805 0.0161774838138371 -0.170334937050947 0.0121740839024757 CTGCAGCTAAGAGGTTTTTATATTCTCAGCTCTATTCTGGGGGGGTAGGAGGGGATGGGGCAGAAAGTCTCCAGCTCATCAGACCTGCAAGGGGACAAGGTCTTCAGAGGCTTCTGGTCCTCTCCAGTTTCAGAAAAGTCACAACGCATTCTGCTACAACTCAGGAAAATGCAACATGGCAGCAGCGATGGAAACAGAACAGCTGGGTGTTGAGATCTTTGAAACTGCAGAGTGTGAGGAGAATATTGAATCACAGGATCGGCCTAAATTGGAGCCATTTTATGTCGAGCGATATTCCTGGAGTCAGCTTAAAAAGCTGCTTGCTGATACCAGAAAATACCATGGCTACATGATGGCTAAGGCACCACATGATTTTATGTTTGTGAAGAGGAATGACCCAGATGGGCCTCATTCGGACAGGATCTATTACCTTGCTATGTCTGGCGAGAACAGAGAAAATACACTGTTTTATTCTGAAATTCCCAAAACCATCAACAGAGCAGCAGTCTTAATGCTCTCTTGGAAGCCTCTTTTGGATCTTTTTCAGGCGACACTGGACTATGGCATGTATTCTCGAGAAGAAGAACTATTGCGGGAAAGGAAACGCATTGGAACAGTTGGAATCGCTTCTTACGATTATCACCAGGGAAGTGGGACATTTCTATTTCAAGCTGGTAGTGGAATTTACCATGTAAAAGATGGAGGGCCACAAGGATTTACTCAACAACCCTTACGGCCCAATTTAGTGGAGACTAGTTGTCCCAACATTCGGATGGATCCAAAACTATGCCCAGCTGATCCAGACTGGATTGCTTTTATACATAGCAATGATATTTGGATATCAAACATTGTAACGAGAGAAGAAAGGAGGCTCACTTATGTGCACAATGAGCTAGCCAACATGGAAGAGGATCCCAGATCAGCTGGAGTTGCTACCTTTGTTCTTCAAGAAGAATTTGATAGATACTCTGGTTATTGGTGGTGTCCAGAAGCTGAAACAACACCCAGTGGCAGTAGAATTCTTAGAATTCTGTATGAAGAAAATGATGAATCTGAGGTGGAAATTATTCATGTTACATCCCCTATGTTGGAAACAAGGAGAGCAGATTCATTCCGTTATCCTAAAACAGGCACAGCAAATCCAAAAGTCACTTTTAAGATGTCAGAAATACTGATTGACGCTGAAGGAAGGATTATAGATGTCATAGATAAGGAACTAATTCAGCCTTTTGAGATTCTGTTTGAAGGAGTTGAATATATTGCCAGAGCTGGATGGACTCCAGAGGGAAAATATGCGTGGGCCATCCTACTAGATCGCTCCCAGACTCGCCTACAGATAGTGTTGATCTCACCTGAATTATTTATCCCAGTAGAAGATGATGCCATGGAAAGACAGAGATTCATCGAGTCAGTGCCTGACTCTGTGACACCACTGATTATCTATGAAGAAACGACAGACATCTGGATAAATATCCATGACATCTTTCATGTTTTTCCCCAAAGTCATGAAGATGAAATTGAATTTATTTTTGCCTCTGAATGCAAAACAGGTTTCCGTCATTTATATAAAATCACATCCATTTTAAAGGAGAGCAAGTATAAGCGATCCAGTGGTGGGCTGCCTGCCCCAAGTGATTTCAAGTGTCCTATTAAAGAGGAAATAGCAATTACCAGTGGTGAATGGGAAGTTCTTGGCCGGCATGGATCTAATATCCAGGTTGATGAAGTCAGAAAGCTGGTATATTTTGAAGGCACCAAAGACTCTCCTTTAGAACATCACCTGTATGTGGTCAGTTATGTAAATCCTGGAGAGGTGACGAGGCTGACTGACCGTGGTTATTCGCACTCTTGCTGCATCAGCCGGCATTGTGACTTCTTTATAAGTAAGTATAGTAACCAGAAGAGCCCACACTGTGTGTCCCTTTACAAGCTGTCAAGTCCTGACGACGACCCAACCTGCAAGACAAAAGAATTCTGGGCCACGCTCTTGGATTCAGCAGGTCCTCTTCCTGACTATACCCCTCCAGAAATTTTTTCTTTTGAAAGCACTACTGGATTTACATTGTATGGGATGCTGTACAAACCTCATGATCTACAACCTGGAAAGAAATACCCCACTGTGCTGTTTATATATGGTGGTCCTCAGGTGCAGTTGGTGAATAATCGGTTTAAAGGAGTGAAGTACTTCCGACTGAACACCCTGGCCTCTCTGGGCTATGTGGTTGTGGTGATAGACAACAGGGGGTCCTGCCACCGGGGGCTTAAATTTGAAGGCGCCTTTAAGTATAAAATGGGTCAAATAGAAATTGACGATCAAGTGGAAGGACTCCAGTATCTAGCCTCTCAATATGATTTCATTGACTTAGATCGTGTGGGCATCCATGGCTGGTCCTATGGAGGATACCTGTCCCTAATGGCGTTAATGCAGAGGTCAGATATCTTCAGGGTTGCTATTGCCGGGGCCCCAGTCACTCTGTGGATCTTCTATGATACAGGCTACACGGAACGTTATATGGGTCACCCTGACCAGAATGAACAGGGCTATTACTTAGGATCTGTAGCCATGCAAGCAGAAAAATTCCCCTCTGAACCAAATCGTTTACTGCTCTTACATGGGTTCTTGGATGAGAATGTTCATTTTGCACACACCAGTATATTACTGAGTTTTTTAGTGAGGGCTGGAAAGCCATATGATTTACAGATCTATCCTCAGGAGAGACACAGCATAAGAGTTCCTGAATCTGGAGAACATTATGAACTGCATCTTTTGCACTACCTTCAAGAAAACCTTGGATCACGTATTGCTGCTCTGAAAGTGATATAATTTTGACCTGTGTAGAACTCTGGTGTACACTGGCTGTTTAACCAAATGAGGAAGTTTAAATTTAATCAATAGAGAATTGATCATCACATTTTGGTACTTGCCACATAACATCTACTTCTGAAAGTACATCTGGTGCCACGCAGGTGTTTACAGCTTGTGGATAGTAATCTCATACCTTAACCATACACACACAAAATTAAATGACACGTATTTCTAAGGGACCCAGCAATACCTTGAGAATCACTGAAAGAAATAAGACATTAGCACTATGTATTCATACTACCTTATTTTCATTTTTAATAGCATTATGAAACCTCATGGACTTAGTGTATTTTTACAGTATACTTCGGAATTTGTTAAAATATGATGATATTAGTGATTGGCTTGGTTCAATTCCAGAATCTCTGACTAGTTACAGATTTGATAGCACTTAAATGTAATTGAATAGCTTCTGCTTCGTTGCTTGGGGTGTATCCAGCATGTTATAAAGTAATCACTATTAAACCTATGACTTAACCAATCATTAACGATTGTTCAGGGTTAAGTTAGTGGCCTCCTAAAGACACTTACTTTGTTTCATTCAAACTCTGACCAGTTTTTAGCCAATTTAAATTGTATCTAGTATAAATGGTTCTCTTTAATGATATGACCGAGTGGGTTTTTCTTTTCACATAAAGGCAAGTAACTGTATATGTAGCATGATTATAATATTGATAATTACAGGCAGGAAAATTTTAATCAGATAATTAGAGCTTAAATATTTGCAGGCAGTTCCTTTCCCTTTGGGAAAAGAAAAAAGTACACATTCACTCGTATTCTTCAGAAAACTTAATGGTGCCATTTTCCATTGGGTATTTTCCTCACTGAAATGTTCCAGAGTTTTAGGGCAATGGAAGGGAATTTTGGTGGAGTCGGGGAGACCAGGGTGTGGAGAATGGCAAGGAGAGGAGAAGGCAAGGGTCTGCTTAAGAACTAAGCAGAAGTATAATCTGACCAAAAATACTCATGAAAAAGTTTCAGAATTGAAATTTAAACTCCTAGAATATTAGCTAAGGAAACCAGAATTAAGAAATCACTCTCTTGCCAACAGTTACAGACTAACATTATTCAGGGGAAGAAAAGCTCCTTACAGTTACTTTTACATTTCAATTCTAATTTTTTGTTATTTTCTTCTTAATTTTGGAAGCCTTGCAAATTGAAACTTTCTTGAACCTTTATAAATTATTTGAGCATCATTTAAATATTGTGATCTTAAAATACAGAGGTTTCCAGACAACCTCTTAACCATAAACTGATCCCCAGCCAGCCATGACTCTCTTTTTCAGTGTTCAAAGCTTATAAGCGATTTCTTGAGTGGTCATGACATGTTCCTGATTTAGCCCTAGAGCTTGACTATTAAGGGAGCTCATAGTGCTGATTGGGATCTGTCATCTTAGCATCTTAGGGTGCTAGCTGGGTCACATTGGAGCCAATGTCAGAGAAGGCACCCAAGAGTTTGACCCTTTTTATCACAAGCCTCAATGTTCGGAAAGTCGTTATCAGTACTTCTAAACAATATTCCAAAAGAAAAAAATTTTACTCTCTCTCACCATTACAGAGTGAATAGATTCCTAATCCTAGAGAGCACAGCCTCCGTTAGTAAAGATAACTGTGCTTGAGACGTGGACCTCATCTTTGAGGGCCACATGGGAGGTGGGAGACGTCCAGAGGTGGCAGGGTGACCTGGTGGTTCTGTCCACGGAGGGGGGTTGGGTTTTGCTGTTTTTGTATTTATACTGTATTATAGGTACCACACTTTTCCCTATGACTGTATATGTATGGATTTTCTTGTTTATGATATTTTCCCATGCTGAGATATGTTTATATTCTTTTCAATGTTAAATTAAATTGATTTGGGTAATATTCTTCCCCAAGAAAGTACTTTCCCCCATGACTTAAGTTTGTATCTGATTACTGAAGGCCATTTTTGTTTGTGGACCTCGTTGGCCTCCGAGGATATATCCTTATATAATATGCAAAGTAGAAATGGTATACAGTAGCTTTTAGACAGCCGTTCATTTGAAACCTCTTACCCAGTATGGCTGTGTTTTCAAAATGGCATCTCGTATTTTACCAAAACAAACCTTAAAGGAACCTCATGGACTCTCAAATTCACAGATATTTTCCTTTTGCATCTTGCCATCTGCTTTCCTCCCATCACAAGGAATGCTTCTGTTATCATTCCCTGTCAGTCAGTTAAAGGCCATTCTCCTTCTATAGAGAGGGAAAATACCTGACTGAATTTGCATGCAGAAAGACAACTTGACTGAATTTGATTTTTAAAATCAATGGGAAAAGCATAGTCAATTCAGGCAATCTGTAGAAACCTCACTAAAACTATTTGTACCCTATGTATGGGCAACAAACTAAAAGGCAAGAGTATAGCAACATTTTTAGTGAGAACCAAAAAGCTCTAGGTTAAACATCAAGGGGGAGTTTTGCAGGTTTGATAATTGAGTGCACTTGAACAGCCATCAGGTAGGTATGGTTGCTTGTGTGTTGAGCAGGGAGACTCAAGATCTCATTCATCTGGATGCTTTTGAAAAGAAATGCACTCTTGAACCTCACTCTTAGAAATTTGGATTTGGTTGATTAAGTGGAGACCAGGAATCTGCATTTCTAACAAGCTTTCCAGGTGTCTCTAAAGCAAGTCATTTGTGGAGCTACTTTAAGAAACTCTCCTACAGGACTGAGTTGGATTAAGAAAATAATAGGTGATTTTTACACTGGACTGATTTTCAAGAACGTAAAACAATAGTCAAGATAGCTCCTCATACAGTAATTATTGGCTGTTTTTTCACTGTGAAAAAAGCAGAAGGTATCATTAACTGTATCTCCCCTTGGTCTGGAGATTAATTTTGGAATGAAGGTTTTTCCCTCTTGCTGTTCCTGGCTTGTTTCCAATGCCTCACACATAAGAGGAAGAAGTCACAATGCATGCATGATTTTTCAAAAGAATGAGGTAATAGGTAACTGATGCTTACTTTTACTTGTTTTATTTCTTGAAGAAAAGTGTATCCCACCTCTCTATAACATTGTCTCTCTTTAGGTGGAATGATTCCTATGAGATCTCTCATTATTATAGAATTACAGAACTTTCAAGCTATTATATCTTTGATATAATCTGATGTTCTCATTTTTTAGAGGAGGAACCTCCATATAGAGAGGAGAAAATATACCCGTGGCCACACAGCCCCTTAGTGCTTTGTCAGTGCTAGACTCCATCCAGATATCCCAGCTCATGGTAGTTAAATGATATGTAGAAAAGGCAAATTTTTAAAGAAGTATTTATTAATATATTCCTATGAAACATTTTAAAGATAACATAAAATGGTTAATTTTTCCATTCTGAAGTAAATGCTAAGCATGCTTATTAATGAAGCAGTACTTCTAATTAGTATATGACATTCTGAAGTTAATTAAAATTGTTAAACTCAACGTGTCTTCCTTGGTGTAGTGGGAGGTTTGGGGCTTGGGATATAAAGTGCTTGTTTAAGCCTAGGAACCCAAATTAGAGCTATTTAAAGTAAGCAAAAAGACATAGCCATATCTAAACTAAGATATGGAAGCTGAGTGTCCATTCCCAGCAGACGTAGGAAACTTTCCTGACTCTCACCTTTCCACAGCCCAACCTCACCTATCCATCTTGCAGCCTAAAATATGAAGGCATGTTAGTGCAAGGTGCTGGCTGCAGTTTTTTCTTACTTTGTCAAAAAACAATTCTAGGTAATCATTTAAGAAGTCCCTCACAGAGAGAGAGAAGTAGTGTTTGTATGTTTGTTTTTAAATAACCCAAATACAAGTTTATGTTGTATTCAGCACAATTGGAGTTCAGGTCTTTAATTTTAGAACATAAAGTGCCTGCTGTTTTAAGCGTTGACTTGTATAAAAAGAACTGCATGTCTCACTCCAGTAAGTTTATGGGTTTTCTCATTTTCAGCTACATGGCTTTTAATCATGTAAAGTGAAACCTTAGTTTTGTTGCATTTTATTACAGGTTCTTTGTTGCAATAAAGATGCTGCTAAAATTAATTG EMBV3_39198 CCTGTGAACCCCCCTAGACCTTTCAAGCATAGTGAGCGGAGAAGAAGATCGCAGCGTTTA Gene GeneID:511990|PHF20L1:NM_001082432:20_cdna Constitutive 1 NULL GeneID:511990 14 GENE PHF20L1 MGC148600 PHD finger protein 20-like 1 EMBV3_38695 CGAGAGCGGCCCCCTGGGCTCCGCAACTACGACTGTGAGAAAGAGAAGGAGGAGAGCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15038 TTTGCTGGCTGACTGCAGAATGTTCCCTGCAGAAATCCCGGAGAGGTGAGGAGAAAGCAT Gene BVT0102_076743 + 1 EMBV3_23227 GK000029.2:41175173-41298478 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27982 ACTGCTGTAGCTTCCTCCAGCTACTATTTGGGCCCCTGGATCAGACATCCTCAATATGAG Gene BVV0102_064899 + 0 NULL GK000027.2:42451168-43276967 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23451 TCCTAATGAGCCGCCGTGTTTGCTGGATGATTATAGCAGGTTCCTGGTTTGGGGGCTCTT Gene GeneID:616938|LOC616938:XM_002689121:87_cdna Constitutive 0 NULL GeneID:616938 7 GENE LOC616938 NULL similar to olfactory receptor, family 2, subfamily T, member 1 EMBV3_26905 CTTGGAGTCTCAGCTACCGGACCACCAGGGAAGTCCTGGCTCATTTCTAAATTGGTTTAC Gene BVV0102_019784 + 0 NULL GK000016.2:45416463-45465611 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18987 GAGCTGTCGCCTAAGTTCTGTCATCTCCCTCTACATCAGGCACTTTATTGCTGGGCCTCT Gene GeneID:407222|ST6GALNAC6:NM_001001151:19_cdna Constitutive 1 NULL GeneID:407222 11 GENE ST6GALNAC6 MGC139767 siat7f st6GalNAc-VI ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 EMBV3_23754 TGGGAGCTAGTGGTGCTCCTATATAGGGATTGGAGCTGTCGATTGGCAGCCCCTTAATTT Gene BVV0101_004691 + 0 NULL GK000015.2:38445584-38465720 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09238 GCATTCCGATACGAGACCCTGTGCAATGAGCTCAGCTTCCTGTCTGATGCCATGAAATCA Gene GeneID:519803|AMPD3:XM_002693100:482_cdna Constitutive 0 NULL GeneID:519803 15 GENE AMPD3 NULL adenosine monophosphate deaminase (isoform E) EMBV3_25128 GGCTTCTAACAAGCAGCCAAGGAGATCATGTCATCCCCACCATTTGAGTTTGCATTCTCT Gene GeneID:540832|CSRNP3:NM_001076244:142_cdna Constitutive 0 NULL GeneID:540832 2 GENE CSRNP3 FAM130A2 cysteine-serine-rich nuclear protein 3 EMBV3_42104 TACCTCCAGCCCCAGCTCCTGTTCCTCCAGGACTCTGTCCCAGGGCTGCCTGGCATCCGG Variant GeneID:509100|C3H1ORF210:NM_001081517:107_cdna 121^229 1 EMBV3_11288 GeneID:509100 3 GENE C3H1ORF210 MGC148971 chromosome 1 open reading frame 210 ortholog EMBV3_14654 CACTGGAAGCGCAGAGTCCTAACCACTGGACTGCTAGGGAAGTCCCACTATGTGCATTTT Gene BVV0102_083877 - 0 NULL GK000029.2:45877740-45899596 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164087 TCONS_00164086 1 XLOC_100117 NonCoding TCONS_00164086 XLOC_100117 NonCoding NonCoding LOC100848115 29:45879422-45894992 j TSS122853 2000 2 TCONS_00164086_7 97 0.15 3 0.871732288522063 0.000551524780462561 0.000218357089791303 0.000169506521469568 0.000648395303299895 0.000133825475736883 0.000198552442946738 5.38320798235116e-05 0.000178888266255623 0.000337646161108388 0.000338335282907968 0.000348484743268479 0.000411730021778146 0.000178198280294877 9.75166236793527e-05 0.000151191658277954 9.85427094936131e-05 0.000144963559644622 0.000156359701919905 9.66715418493559e-05 0.000322814715119745 0.000131995424706904 0.000177954256770462 9.08081162483792e-05 0.000150577465394322 0.000123825307421734 0.000185681899798365 0.000305500374714254 0.00027355542458875 0.000327588854422637 0.000477854239287044 XM_005226998.1 RAD9A PREDICTED: Bos taurus RAD9 homolog A (S. pombe) (RAD9A), transcript 0.0 868 100.00 0.24 NR_033894.1 LOC286114 Homo sapiens uncharacterized LOC286114 (LOC286114), non-coding RNA. 2e-19 102 75.16 0.0775 0 noncoding 0 0 0 0 -0.502783923064374 0.0289047980392535 -0.131127234572029 0.0659420341928713 GTCATCAAATATATTTGTATATTCTTTTTAAAATATAAATTAAATCATTATTAACATCCTGCATTTTGACAATTTTTTTCATATCACAGAGAGTTGCACATCAATACAGTAAGCTCTGCCTAATTTTAACAATAACCACACATATCCTCTTTAATGGTATCCATCATTATTTAAGTGGTCATCTATCGATGGTGATTTGTTGCTTTGTTTCCATTTCCACTAATGCTTAATTACCTCTGTATATACTTTGTTGTGCACACATGACCATTAATTTCATAGTATTTCTAGAATCGCTGAAGCAGAGGCTATGTGCATTGTTTCCATTTTTTAAATTTTATTTTTCTTTAAAAAATTTTTTTTTTATTTTTGGCTGCTCCACCTGGCATGTGGGATCCTAATTTACTGACCAAGGATGGAACCCACGCCCTCTGCACTGGAAGCGCAGAGTCCTAACCACTGGACTGCTAGGGAAGTCCCACTATGTGCATTTTTAATTCTAAAAGGCACTACCTAATTTCCTTACCAGAAATTGCACTACTTTACAGAGAATGGGAATGCCTGTTTATGTTCTTAAAGGACTGTCCAATCTGCACATCAATCATGTCATATAAACCTTGCAACACTCTCAGAGGAGAAATGGGAGCCATTACAATTATCACCCTTTTTAGAAATAAGGAAACCGAGGCCCGGTAGCTCCTGGGCCAGCTCCCACCTCCACATCGTTCTTCCTCCGGCGGGCCCGGCTCGGCCCGGCCTGGGACGAGTCACCAGCCAGGGCATCCCCTCCTCAGGGCAAATTTTCAATCGGCAAGACGAAACCATCCGAAGACCGCGAGCCCACCTCTTCACCTCGCCTCCCAGATGCCTCAGAGCCGCGGCTACCACGAAAAACTACCTTTCGGCCTCCACGGCCTCTCCTACGCCGGCAGCACCCAGAAAGGGCCCAGGCCAGCCGTGGAACCTGGCGGCTCAGAACGGACTGCGACGCTGGGGCGCCATCTTGCGTCTGTTCTTCTGGCCGCCGGATGACAGTCTGGAAACCACATTTCCCAGTGTGCCTGGCGCCTTCGCGCAAGCGCGAAGATTCCACCCCCCCCCCCGCCCCGTTTCCATGGGAACCTCACTCTCCAGAGTCCCGGCGGCTAGACTCTGAGGAGAGTCAGTTGTCGGTCTCTCTGTGGTGCCCCGACGCCAGGACTGGGTCTATAGACTGTTGAGGGGGCAAAGTAAGAGCCCGAGGAAAGGAGACCAGGTGGCCCTGCCTCCGGGCTGGGGCCAGCGCTTTCCAGTTCTCCTCAGCGTCTGGGCGTCCTGGGGCCTCGGCGTTCTGAAGCGAAGGGGCCCGGGTTGGCGAGACCAACTCGAGCACTGGTCTGCGCGGCCCTGCTGGTCCCACTCAGCGTTTTGTCACCCCCTGCCAAGAGCCTGCGCGCCGCCGACAGGTATTCCCGGGGCGCGGGCAGGAAGAGGAAATCTGGACACAGACATGTACAGAGAGAAGACAAGGTGGAGACACAGGGGCACGATGGTTGTCTACAAGCCAAAGACTGGGGCCTGGAACAGATCCTTTCCCACCCACCTCGGAAGGAACCAACCCTGCCAACACCATGATCTCAGACTTCTTGCTTCAGAGCTTGAGCTCCTGGAGCTTAGGGACTAGGGTTCTGAGCTGCCACGACCAGCACGAGACCAGCACGAAGCTGTTTTCTAACAGGACTCAGGTGGATGAACTGGAGGCCAGCCTACCTGCTGAGGAAACTAGCAGTCGTGTTCCAGATCCCCTAAGTCCTCGAGGTGGTGTCAGCCCCGCTCAAGCTGGCACTCTTTGGCTTCCATCTGCTCCTAGACTAATTCAGAAACGTCTTCCTTCCCCTGTTTACTCAAGTGTCTTGGAAAATTAGCTCCCTAAGCCCTCACGCTACCAGTGAGTTTGTCTGAGTTTGAAGGTGGATAAATGTTGCCACACCTGAGTCAATAAAGAATGAATCAGTGTGCCCCTC EMBV3_14549 CACTAACAGATGGAGTCTGTGTGCTCCAATGTCCAAAAGACGTGGAGGTGTAGGAGTTGC Gene GeneID:526880|LOC526880:XM_002699460:26_cdna Constitutive 0 NULL GeneID:526880 X GENE LOC526880 NULL similar to kelch-like 4 EMBV3_19787 GAAAGGAAGTTCTCTGCACATCGAAGCCCCAAAACCTGAAGACTCAGCCACTTACCTCTG Gene GeneID:100337247|LOC100337247:XM_002690646:155_cdna Constitutive 0 NULL GeneID:100337247 10 GENE LOC100337247 NULL hCG1812119-like EMBV3_41384 GAGGGTTTTTTCCTCCTAATTTAGTGGTTGTTTTTGTTGTCTATCCCACAGGGGCAGAGG Gene BVV0102_126628 + 0 NULL GK000028.2:45053553-45127534 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04999 AAGAGAAAGTCTTACAACTGGAGCTGGACAAAGATTTCTTAGACATGACGCCAAAAAGGC Gene BVT0102_092849 + 1 EMBV3_28710 GK000029.2:41329263-41338686 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35523 CACAGAGCAGGTTGTGGCTGTGATCGATGAAGAGATGTGTATCAACTGTGGCAAATGCTA Gene GeneID:281124|DPYD:NM_174041:108_cdna UTR3_Alt 2 NULL GeneID:281124 3 GENE DPYD MGC179396 dihydropyrimidine dehydrogenase EMBV3_01792 CCCAGCGCTCAGCTTTGCTCACAACGGAAACAACAACAACAACGGCAATGGATACACCTA Gene GeneID:539904|MEX3B:XM_002696619:155_cdna Constitutive 0 NULL GeneID:539904 21 GENE MEX3B NULL mex-3 homolog B (C. elegans) EMBV3_30599 CAGATTAGACACCTAGGAGGGCATGTGTCCTAAGAAGCATTTCTTTGACCAACTAACTGG Gene BVV0102_375517 + 0 NULL GK000005.2:65453819-65522972 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195353 TCONS_00195354 TCONS_00195352 1 XLOC_118027 NonCoding TCONS_00195352 XLOC_118027 NonCoding NonCoding - 5:65514673-65522677 - TSS145595 262 0.251908396946565 3 0.967637136073972 0 0 3.53205657510109e-05 0 0 0 0 9.48473785959599e-06 0 0 0 0 0 0 0 0.00162739340083956 6.34300130159229e-20 9.57670375694945e-05 0.00240285293602006 0.00330541526246497 0.00211277576193822 0 4.9385462412305e-82 0.000191961507589343 0 0.00171470533071009 0.000214087719610968 0 2.03555046086594e-321 0 XR_231123.1 LOC101908204 PREDICTED: Bos taurus uncharacterized LOC101908204 (LOC101908204), 4e-132 473 100.00 0.99618320610687 0 noncoding 0 0 0 0 -0.530642584069124 0.0276222887820753 0.0187596616694043 0.723819321365463 TTATAAGAAAAAGCATCCTGATTTTCCCTTCAGGACTCACTCTTCCCTCATTCTCAGTATCTGAAGTTCAGATTAGACACCTAGGAGGGCATGTGTCCTAAGAAGCATTTCTTTGACCAACTAACTGGTTCAGAGCTGGCTAGGAGATGGCACTGACTGGAGCATCCTTGGAAGCCAAGTATGGAAGATGACAGAGCCCCCAGATTTAGAGTGCTCAATTACTGAGTATTATACAAGAAGGAAGTAAACTAACATAAGCCAT TCONS_00192318 TCONS_00192319 r 5' 7401 TCONS_00192318 r 5' 0 EMBV3_01581 AGAAGACAATGACCAGGATGCTGGCTGGTGGAACAACCTGCTGGACAAGCCTGGACAAGG Gene GeneID:538865|HOXA4:XM_002686860:62_cdna Constitutive 0 NULL GeneID:538865 4 GENE HOXA4 NULL homeobox A4 EMBV3_11262 GATTTGCCAACCGGGTCCAACCAGAGCCCAATGGAGTCGATGGGGCAGTTTCGGGCAGCA Gene GeneID:100297029|LOC100297029:XM_002696163:115_cdna Constitutive 0 NULL GeneID:100297029 19 GENE LOC100297029 NULL hypothetical protein LOC100297029 EMBV3_20765 GAGTGACGCTTACATGGGGTGTGACCAGGAGTACAAATTCAGCGTGGATGTGAAAGAAGC Gene GeneID:510529|SNRNP200:XM_002691133:134_cdna Constitutive 0 NULL GeneID:510529 11 GENE SNRNP200 ASCC3L1 small nuclear ribonucleoprotein 200kDa (U5) EMBV3_35631 ATTATGCCATTACCATGAATTCCCAACGCTGCATCCTGTTGGTGGCTGGGTCATGGGTGG Gene GeneID:619026|LOC619026:XM_002691587:127_cdna Constitutive 0 NULL GeneID:619026 11 GENE LOC619026 NULL similar to hCG1685998 EMBV3_20530 TTCCTCAAGGGCCACGAGACCTACTCCTACTACGGGCCCCTCAACTGGATCACCTTCAAT Gene GeneID:540994|DEGS2:NM_001076251:286_cdna Constitutive 0 NULL GeneID:540994 21 GENE DEGS2 MGC151900 degenerative spermatocyte homolog 2, lipid desaturase (Drosophila) EMBV3_37923 TGCGCTATTACTACGACAAGAACATCATGAGCAAGGTGCACGGCAAGCGCTACGCCTACC Gene GeneID:524933|FEV:XM_002685577:168_cdna Constitutive 0 NULL GeneID:524933 2 GENE FEV NULL FEV (ETS oncogene family) EMBV3_28842 GCCAGAGGCACCTCCCACCCACTCACCGAAATTAAGACAATCAAAAAATGCCTTCAGACG Gene BVT0102_270356 + 1 EMBV3_06962 GK000001.2:84428659-84536352 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001406 TCONS_00001411 TCONS_00001410 TCONS_00001412 TCONS_00001413 1 XLOC_000354 Coding TCONS_00001412 XLOC_000354 NonCoding Coding MCF2L2 1:84513236-84528536 j TSS723 3480 1 TCONS_00001412_9 82 0.264655172413793 4 0.772795607556049 0.00106551355758888 0.000625485479395166 0.000319553787777397 0.000326247180741886 0.000460811916595739 3.89736958054972e-05 0.000172290342790022 0.000483864541135095 0.000523644274428305 0.000127337836236112 5.97122348249569e-07 0 0.000329133812813811 0.000114458369926953 0.00104897606965987 1.89422631284304e-05 0 0.00211195562233497 0.000818784154254296 0.00112202290548481 0.000384100741332037 3.60719077698072e-05 0 4.534636969688e-44 0.00091805864467765 0.000320718112982338 1.39520007867084e-08 0 1.66612048837339e-38 9.08246912247886e-13 XM_001790423.2 MCF2L2 PREDICTED: Bos taurus MCF.2 cell line derived transforming sequence-like 2 (MCF2L2), transcript variant X1, mRNA. 0.0 1631 99.89 0.260344827586207 NM_015078.3 MCF2L2 Homo sapiens MCF.2 cell line derived transforming sequence-like 2 (MCF2L2), mRNA. 7e-35 154 78.49 0.0505747126436782 0 noncoding 1 1 1 1 0.0339352773602614 0.850927222787037 0.0147040407494732 0.838806720967293 GCCTGTCCCTCCATGTAGCAGAATATCCAGAAGATGTTTATGAAGATGAAGACAATGGCAGACAAATATCCCTAAAACGTTGCTCAAGCAGGGAGTTTATCTCCATGGAAACCTCTGTCAATTGTGAAGGTGCAGAAGATTTGGAAAAGGAGAACAGTGTCCTGAGTCTCTCGGGACTTTTCCGGTTGGACGACAGTTACGAGACCTCCACGTCTGGTCAGGAGAAGGGAGAAAGCATTCGGGGAGAGAAAAAGGGCTGTCAAAAGAAGGACACGTGAGTGGAACGCGGAAAGAAAAGTAAGCCAATTTGTTAGCAGTTGCTCCTCTGACTTTCTTCTTGGAATTTCAGGGCCACGAACAAAACTGAGGAGAGCCTTGAGACGTCTACTGGCTTGCTCGCCCCTGCGGGGAAGGCCAGTTTCCCCCGAGCAGAGGCAGTGCGGGCAGAGGCAGTGCGGGCGCAAGAAGGAAGCCTGAGGCCGCCCTCTGCAGAGAACTGACACTCGTTCCAGACCACTGAGCATCCCCGGCCGATTGTATTCCGGGGAGCCGCTTCTGTGGGCGCGGAGCAGAAGCAGCAAAGGGATCTCACAGCCCACACACAGATCCGCTGTCCTGCCGGGGGCGACTGGACCATCTTCCCGGAGCCTGAGGAGCGGTCCACGTCTGCGCGGGGAGCCTCGGGCTGTTCTACGCGCCGCCTCGCGAGCGCAGGGACTCGGAGCAGACCCCTTGGAGAACCTGCAGATGCCGCCACGCGCCCGCGCTGGGACAGGGCGCAGAGTCCGTGGAAAACCTTGCGCCCTTCTAGACGCGCCTAGAGTGTGGACTCCGCGGAGAACCTCTAACTGCTCCACATGTGCGCCTACAGAGGTTAGGGATCCAGTCCTGGAGAGCTGAGTCCAGGGTTTCTGAATGTTGGCACTTTTGACTTTAGTATAACTGCTGTGGAGGCTCTCGGGCATTGTAGAATGTTTAGGGGCATCTCTGCCCTCTATCCCCTAGATGCCAGAGGCACCTCCCACCCACTCACCGAAATTAAGACAATCAAAAAATGCCTTCAGACGTTGCCAAATTTCTGCTGGGGCGGGAGTGGAGAGCTCGGTTGAGAACCTCTGATCGGAGCCGCTCAAACTCCACAGGGCAGCCCTGCGCTCTTCTCCCTGAATCCCCACAAGAATGTTAACTGTGATATTTGTGTTACTTTGTTCCAGGGTTGTTTCCTCTTAGTGAGGGCTGGCTACAAGTTAACTTCTGAGATATTTACGTTTAGATTTATTAGTTTTTAAGTTAGCTTCATTTATTTTCAGTAATTTATTTTTAGTTTAATTAGTTAATATTCATTTTTGTTTTTAGTTTTATCTTTATTTAATTTCATAGCTTTAAAGCTACCTGTTTATAGCTATTTGGTCTTACTTAGTTCCTTAGTTTTTGAGTTATTTTGTTACTCATTTACGGTTACTTTGTTTTGAGTTATGTATTTCCAAATTAGTTACCTTTAGAATTATTTATTTTAAATTATCTATCTTTGCAATTGTTAATATCTGAGTTATTTTCATGTTTTTATTTTTAATTGTTGGCAATTTGGGGATTATTTATTTTTACAGCTACTTATTTGAATAGTAAATATTCACTTGAAGTTTTTTAATTGCTTTATTTTCAGAATAAAATACCTGTAGTTATTTTAGGGCTTTTCCCCTAGATATTTAGTTTTAGAGTTACCTATATTCACAGTAATTTATTTTCATTTATTTTAGAGTCTGGGTTATTTTTACACTCATTTGGGGGTTTTTAGTTATTAATATGTGGTTTTAAATTATTTTCAGTTGTTGCATCTTGAGCATTATATTTTGAGCTTCTTACTTTCAGAACTTTTGAGATACTTAGTTTTTGAGTTATTTTCAGAGTTACTTATTCTCAGTCGTTTCTTTTCAGTCATGTCTTTGTCATTCAAGTTTTTTTCTATTTTGTATTTTTCATTATTTTGTTTTCAGTTTTATTTACAGAATTATTAGTATTTCTTTAGAATTATTTAATCCATCAGTCAGGATCCATTCAAGAGAAACACTATAGTATACTAGTTATTTTAACAGAAAGAATTTATTTTAACAGAAAGAATTTAATATAAGGAAGTACTATCCAGGTACTGAAAATTTCAATGGGGGAAAAACAGTGATAATCAGATATCATGAAGATTTTAACTTCTCTGCTGGCATCAGGAAAGACCAAGGAGTTATGAAGATGAGTGAGAGGTTCCTGGGTCCAGTTGGGGGAGTCAGATGTGGAAATAGGTGATCACAACACAGTGTGTGACACACAACTCTGCCGCTATGTGATGAGGCCGTGTTTGGAAGATGGTAAACTGCTGCTACTGCAAGGGAAATGCAATTTTGAAATTTTTAGACTTCTTAAAAACCAGAAAAATAATAGAGGCTGAATCTTCTGTGAATGAGATTTGTGTCATCTTTCTATTTGGGTAAATGAAAAGAACTAAAACCTTCAGGTAAATCCTTCAGCCTCCTTTTATGAATACTAGTTGCTCAATACCCATTCCAGTGTTCTTGCCTGGAGAATCCCAAGGATGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAAAGTCAGAAACCACTGAAGCAACTTAGCAGCAGCAGCAGTTGCTCAATTAATCATGTCCCCTGTTGCCCACTAGAGGTCTTCATTTCAGCAGGTTGCTTAGGAATGGGAATTCTGTAGCCCCAGTCAAAGTGCTCTGGTATAGGAACTGTAAAATCTGGCCAGAGTCTGTGTCCACAGTAAAGAACAACCAGGCATTATGAAATTATTAGAAAAGTTAGAGATATTCTAAACCAGCATTTCCCAGAGTGTATTTTGCAGAATAGGCAGAAGAATGTTAGAGTTCAATGAGTTAATCCCACAATGAAAAAGAATTATGTAAAAATAAATATACTTTACAAGTAGTACATATTACTGTCTTGGTTGATCCCAACTGGTAAATTAAAGGAGCTGAGAACTCTTTCAGGACCAAAGTCTGTATATTTTTGTTAAACTCATGATTTCCCAAACTTATTTGACCACAGAACCCTTTTCTTTGTGAAATATAACATCCAATATGTATTAGTAAAAGGAAAGACTTTGCTATAACAAAGAGATCCAACAATATATTGACTAAAGAATATTTCCGTCTGTGAAACAGCCTGAGTTGAGCTTGCAGTCTACTCTGCTTCACATGGTCATTTATTGTCCCAGGTTCCTCCTTTCTGGTTTTCTACCATCCCCTAGAGCATTGTCTTTGTCTACACAGTCAAAAGCAAATTTCAAGAATGTCCAGCTTCCATCCTGCAGGAAGGAAAAAGAACTTGGGAGATATATGTATAAGCAATGTTTTAAGGCCCAGCCTGCAAGTAGCACACAAAACATTTTCTTATATTCCCGTAGTGAAAGCTATGTTGAATGGCCACACCAAGCTCCAAAAGG EMBV3_42688 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24318 GCTTCTGGAACTACCTTATTCTGCACCACCCAGCCCTGAAGAGAAGGGCTCCGACACCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31952 CTTCAGCTCGGAACCAACGCTGGAGGACATTCAGTGGAAGCCTGATGAGGAGCCTGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37329 ATGCTCAGACAGCTTCCAAGACAGAGTGGCCAAGAGGGAGAGAAAGGCAGCAAGAACACT Gene GeneID:100297846|LOC100297846:XM_002690244:62_cdna Constitutive 0 NULL GeneID:100297846 9 GENE LOC100297846 NULL similar to trace amine associated receptor 8 EMBV3_38619 TAAAGGACTGGCCCTGGGCTCACCTGGTCTTGATGTGGTGTATGGATCTGTGGTCACTGT Gene GeneID:514547|MAP1LC3A:NM_001046175:1063_cdna Constitutive 1 NULL GeneID:514547 13 GENE MAP1LC3A MGC138125 microtubule-associated protein 1 light chain 3 alpha EMBV3_00681 CAAGCCGTCCGATGGGAGCGAGAACGAGATGGAGACGGAGATCCTGGACTACGTGTAATG Gene GeneID:783869|GTF3C5:XM_002691654:386_cdna Constitutive 0 NULL GeneID:783869 11 GENE GTF3C5 NULL general transcription factor IIIC, polypeptide 5, 63kDa EMBV3_10082 TATGAAATGTCAGAGTGGCCATGCTCCAGACCTGTCAGAAGAAACCACGTATTCCCAGCC Gene GeneID:536117|LOC536117:XR_084559:260_cdna Constitutive 0 NULL GeneID:536117 10 PSEUDO LOC536117 NULL similar to centrosomal protein 152kDa EMBV3_18062 TACCTGGAAAATCCCTTGAACAGAGGGGCCTGGCAGGCTACAGTCCTTAGGGTCACAAAA Gene BVV0101_081632 + 0 NULL GK000010.2:64223428-64625547 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22892 CCGCGCGGGACATAGTCCCGCTCCCGACCGCTGTATTCCTCGGCACTTGTGGAATGTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43618 GCTAATCATTTAGGTCAGAGACCTGTTGTGTTTCTGCAGCATGGTCTTCTTGGATCAGCC Gene GeneID:281283|LIPF:NM_174103:7_cdna Constitutive 0 NULL GeneID:281283 26 GENE LIPF NULL lipase, gastric EMBV3_41807 CTCGTGGGCAAGAATTTTGAGCAGGTGGCTTTTGATGAGACCAAGAACGTGTTTATCAAG Gene GeneID:504356|PDIA2:NM_001098861:54_cdna Constitutive 0 NULL GeneID:504356 25 GENE PDIA2 MGC157374 protein disulfide isomerase family A, member 2 EMBV3_17689 GTCAGGTGGTGGCCCCGTCGGACATGATGGACGGGGCCCAGGCCGGGGCATTTGATCTCA Variant GeneID:510679|ALAD:NM_001014895:20_cdna 644^988 2 EMBV3_01619 GeneID:510679 8 GENE ALAD MGC137079 aminolevulinate, delta-, dehydratase EMBV3_42469 ATCAGTGACTTTGGAATGTCTCGTCAAGAGGACGGTGGTGTGTATTCATCTTCTGGCCTG Gene GeneID:536759|FER:XM_002689429:1_cdna Constitutive 0 NULL GeneID:536759 7 GENE FER NULL fer (fps/fes related) tyrosine kinase EMBV3_15040 CACGGGCCTCTCTGGCCACTGCTTTATATCTGGATTTTTCACGCTTTTGTAGAACTAAGG Gene GeneID:507473|C2H2orf24:NM_001015538:59_cdna Constitutive 1 NULL GeneID:507473 2 GENE C2H2orf24 C2orf24 MGC137840 chromosome 2 open reading frame 24 ortholog EMBV3_14113 GCCCAAAGATTTGCAGCTGAGGAATGCCAGGAAGCTGCTTTAAAGAATAAAAAAGAACCA Variant GeneID:614512|FANCL:NM_001076332:170_cdna 179^296 5 EMBV3_13022 GeneID:614512 11 GENE FANCL MGC133719 Fanconi anemia, complementation group L EMBV3_10859 GTTTTGGACTGTAGAAATTCAGGGAGGGCTCGAGTTTGGCTGGGGTGACCAAAAAGGCTT Gene BVT0102_116778 - 0 NULL GK000026.2:22655325-22677210 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150482 TCONS_00150483 1 XLOC_091889 Coding TCONS_00150482 XLOC_091889 Coding Coding PPRC1 26:22676296-22691230 j TSS112712 5735 1 TCONS_00150482_11 1584 0.0102877070619006 14 0.616888769838613 1.43788087935965e-35 3.30557557050801e-05 6.10360812272514e-52 1.3713593425716e-05 3.4386223078236e-84 8.29242889827635e-42 4.15278601403339e-117 4.19746628652493e-33 5.62761521408963e-44 8.5357026599397e-35 3.94378942776727e-105 6.70675735689442e-27 1.74844089341274e-23 8.92021691876296e-27 1.83532100147303e-44 0.000695310300868005 1.69940553551106e-120 4.4682092649877e-43 6.96844649483601e-05 1.0796395344346e-82 1.51079187250461e-28 2.17383260906644e-99 1.49929394457688e-05 1.05061513612828e-28 6.53640948151963e-06 0.000316726533106978 0.00039103546443798 2.34605696431148e-63 3.39384440685793e-44 1.19976334359057e-132 NM_001205755.1 PPRC1 Bos taurus peroxisome proliferator-activated receptor gamma, coactivator-related 1 (PPRC1), mRNA. 0.0 9194 99.80 0.891194420226678 NM_015062.3 PPRC1 Homo sapiens peroxisome proliferator-activated receptor gamma, coactivator-related 1 (PPRC1), mRNA. 0.0 5918 85.23 0.890322580645161 TCONS_00150482_11 sp|Q5VV67|PPRC1_HUMAN PPRC1_HUMAN Peroxisome proliferator-activated receptor gamma coactivator-related protein 1; 0.0 2157 81.25 0.999368686868687 0 coding 0 0 0 0 -1.00533569254634 0.0108941657336689 -0.0130220925943093 0.804482000108105 CTCTTTGAAATGAATTTTAAACTTCTGTAATACAAAACTTAAAAATAGGAAAACAATATGAAGGAGATTCTAAATGCCAAATGAGTAAATAATAGAGATAGTTTTGGACTGTAGAAATTCAGGGAGGGCTCGAGTTTGGCTGGGGTGACCAAAAAGGCTTTCCAAGATAAAACAGAGCATCAAAGATGTTTTGACGCTCAAGTTTTCCACAGAGAAAAACAAAAGCAGGAGAATGCTTGTTGTCTTTGGAGGATAACAAGATGATCTGCAATAGCAGGCACTAAATTTGGCAATGAGGTGCCAGCGTGGGGCTCTGAGAGTAGCTCAGAGCCGACGCCGATAATGTGGTGTTTTAAGATTAAATTTGTGCCTGGCGTGCTGCAGTCCATGGGGTCGCAAAGAGTCGGACAAGTCTGGGCAACTGAACAAAATTAAACAAATTACCCTGCTGCAGTGTAGCAGGTGAGATTTAGCTCTTGAAGTGCGCGTGCCCACGAGGGGGTGCTGTTTCAAAACACAGGCCTACTTGGACTAAGGCAAAAGGAACGAGCAGCAGGTAAAACGTCAGACAAAGAGGGCGCTCCGACAGTTGGGCAGATTAAGAAAATAAAAAGATGAGCAAAAGGCACTGCTGCAGGAGGAGGGCGATGATTCTGGCTTTGTCAGTCTGTCTCGGCTGGGCCCCTGTTTGAGGGACAAGGACCTGGAGATGGAGGAGCTGATACTGCAGGATGGGGCGCTGCTGGGGACCATGCACAGCTATATGGATGCCTCTCTCATCTCCCTCATTGAAGATTTTGGTAGCCTTGGAGAGAGCAGATTATCTCTGGAGGACCAGAATGAAGTGTCACTGCTCACAGCTCTGACGGAGATCTTGGACAATGCAGATTCTGAGAACCTATCTCCATTTGACAGCATTCCTGACTCGGAACTGCTCGTGTCACCTCGGGAGGGCTCCTCTCTGCACAGGTTGCTCAGCCTCTCTCGGACACCCCCAGAACGTGACCTCATCACCCCAACTGACCCACTGGGGCCCAGCACAGGCAGTAGTAGAGTTGAGATGGCGCTCGCAGATCCCCCTTGGGACTTCTCTCCACCTTCCTTCTTGGAGACCTCCTCCCCTAAGCTTCCTAGTTGGAGACCCCCAAGGTCAAGAACCCGCTGGGGCCAGTCCCCTCCTCCCCAGCAGCGTAGTGATGGGGAGGAAGAGGAGGAACTGGCTGGCTTCAGCAGTGAGATGCTTGCTGGGGAGCTTAACAACTCTGTGAGCAGCATCCCAGACTTCCCCATGCACCTAGCCTGTCCTGAGGAGGAAGAGAAAACAGCAGCAGCAGCAGCAGAGATGGCAGTACAGGCAGCTGGAGACGAGAGCATCTCCTCCTTGAGTGAGCTGGTGCGGGCCATGCACCCGTACTGCCTACCCAACCTCACCCACCTGACGGCGCTCGAGGATGAGCTTCAGGAGCAGCCAGATGACTTGACACTGCCTGAGGATTGTGTGGTGCTGGAGATTGTGGGTCAGGCGGCCACAGCTGGCAATGACCTGGAGATCCCAGTTGTGGTGCGACAGATCCCTGCTGGCCCCCAGCCTGTGCTCCTGGATGACACACTAGAGGTCAGTCCAGCCTTGCAGCTGCTCATGCCATCACTAGAGGTGGAGACAGAGGTTGCGGTTCCCAAGGAAACCCTCTGCCCTGAGGATGAGGGCTTGTCACTGGACTCAAAGGAAAAGTTGGAGGCAGCCTCCATGTTGGAGCCCAGGGAGGTCATGGAGCCAGTGGCGCCCAAGGGGCCTCAGAACCCACCAGCCAACGCCATGCTAAGTTCCCAGAGGGCTCGAAAGGGCAGGAGGAAGAAGAGCAAGGCGCAGCCAGCTGCCTGTGCAGAGGGCTACACCAGGAGGCTGAGGTCGGCCTCTCGTGGGCAGTCTACAGCTGTTCCAGAGGTGACCTCTCAGGGAGGCAGCCTGCCTCAAGAGGACCTTCAAAGAGAGGTTGGGCCTCCTCATGGTAGAGGGAAGCCCCGGGCTTGGGCTCGGGCCTGGGCAGCTGCCTTGGAGAAACCCAGCTCTGCGAACTTGGAGAGCAGTACTAAGCAAGCTAGTCCTGCTAAAGAAGATCCTGTAGACCTCTGCCCCAGCCTGGTTGACCCTATCCAAGCCAACCCTGTTTCAACGCATCTCTCACTGGTTGACTCTGCTCAAGCTGACCCCATGCCACTTGACTCTCTTGAAGCTGATTCCACTGTAGTTGACCCTGGTCCCACTGCGACTGACACTGAACCTGTTGACCCTGTGCTGACTAACATTGCTTCAGCGAACTCAGAGCTGGTTGAACCCCTCCCAGCTGATCCAGTCCTGGCTGACACAGCAGCAGCTGACCCTACAGTGGTTGTTCCCATCTCAGACAACTTGTCTCCAGTTGACCCTGTCCTGGTCAAGTCAGTACAGGTTGACTCTGTTCCCAATGACCTGTCTCCAGTTGACCCTGTACTAGTTAAATCTAGGCCAACTGATCCCAGACGTGGTGCAGTATCATCAGCCCAGAGGAATCCAGGTGCCCAGCTCCTCCTGGAATCAGAGTCTTCAGAGCCCCCAAAGGCCAACAGTCCTGAAGTCAGGGAGGTTGTAGGTCCTCTGAAGGGAGAAACTGGTACCAGTACCACAACCCAGGAAGTCAGGCCTCGGCCTCTTAGCCTGTCTGAGTACCGGCGACGAAGGCAGCAGCGCCAGCCAGAGGCCGAAGAGAGGACCCCTCAGCCTCCAGCTGGGAAGTGGCCCAGCCTCCCAGAAACTCCCACAGGGCTGGCAGACATCCCTTGTCTTGTCATCCCTCTAGCCCCAGCCAAGAAGACAGCTCCACAGAGAAGTCCTGAGGCGGCTCCTGAGGCTTGCTTTGGGTCTGTGGGCCCCAGCCCTGCCTCCCCTAGTCCTGAGCCACCTGCGACCAAACCTATGGCCTCAGCTCCTACTGAGCAGGTGCCATCCCAAGAGAAACTGCTGCCAGCACGACCGCTACCTCCTGCTGTGCAGCCCATGCCCCCCACAATGCCCACTGCTCTGCCTTTTCCCACGGGTGGGCTGGGCATGACTCCTGCGCTGCCCCTTCCCACAAATGGGCAAGCTGTGCCCAATCTGCCCCCACCACCCCTGCAGCCTCCTAGTGTTCCGATGTCTCTGGGGCCAGTGCCACCTGATCCCTATACTCACTATGCCTCTGTGCCACCCTGGCCTTGTTATCCTCCCGTGTCCCCTTCTGGCTATCCTTGCCTGCCCCCCCCACCAACGGTGCCCCTAGTGTCTGGTACTCCAGGTGCCTTTGCTGTGCCCCCCACTTGCAATGTGCCTTGGGTACCTCCTCCTGCCCCAGTCCCACCTTATAATTCCAACTGTACCTATGGGCCCTTGGGATGGGGCCCAGGGCTGCAACACCCTCCATTCTGGCCTGCTGTTCCTCCACCTCCATTGCCTCTAACCTCAGTTGGAAGAGCTGTCCCCCCACCCAAGGTGGAGCCTGGTGGCATCCCAGCTGGCTCTCCTGAAAGTGTGCCAGCTGTGCCGATGGCTCCTCCCCTCAGTCTTGGGGCAGCTGGCCAGGGAGCTCCACAGACAGAGCCCACCAAGGTGGAGGTCAAGCCAGTGCCTGCATCTCCCCATCTGAAGCACAGGGCATCCTCCCCGGTGCACAGCCCGCGGATCAAGGCTCCACCGTGTGTGTCTGCTGAGAATGTGGCTGTTGAGGAGCCTGCATCAGAGAGGCTAAAGCCTGAGCTGCAGGAGACTAGGCCCAAGGAGAAACCACCCTCTCCTGTTGCCAAGGCTGTTCCCACACCGGCACCAAGGCAGAGCACTACCACCAAACTGCCTGTTGTCCACCCAGCCCGTCTAAGGAAACTGTCCTTTCTACCTACCCCACGTACCCAGGGTCCTGAGGCCGTGGTGCAGGCTTTCATCAGTGAGATTGGAATTGAGGCGTCGGACCTGTCCAGTCTGCTGGAGCAATTTGAGAAATCAGAAGCCAAAAAGGAGTGCCCTCCCCCGGCTCCTGCTGACAGCCTGGCTGTAGGAAACTCAGGCAGCGTTGACACTCCCCAGGAGAAGAGGCCCCTAGACCGGTTACAAGCCCCAGAACTGGCCAACGTGGCAGGGCTCACCCCTCCAGCTACCCCTCCCCATCAGTTATGGAAGCCCCTGGCTGCTGTCTCTCTGCTGGCCAAAGCCAAATCTCCTAAGTCCACCGCCCAGGAGGGAACCCTGAAGCCTGAAGGAGTTACAGAGGCCAAACATCCAGCTGCAGCCCGCCTCCACGAAGGGGTCCGTGGCCCTAGTCCGGTCCATGTGGGCTCTGGGGACCATGACTATTGTGTTCGGAGCAGGACCCCCCCAAAAAAGACGCCTGCCCTAGTCATTCCAGAGGTGGGCTCCCGATGGAACGTCAAACGCCATCAGGATATCACCATCAAGCCTGTCTTGTCCCTGGGCTCAGTCACCTCTGTGCCTCCAGGCACAGCTGCCTCCCAGAAGCCACTTGATCACAGGACTAGCAAAGAGCAGGCAGATCCCCAAACTCCTTGCCTTGCCCCGTCTGCCTTGCTATCCCCTGAGGCCTCACCCTGCCGGAATGACACGAACACTAGGACTCTCCCTGATCCCTCAGCCAAGCAGCAGTCAGTGCGCTGTTATCGAAAAGCCTGCAGGTCAGCCAGCCCCCCAAGCCGGGGCTGGCAAGGCCGCCGTGGCCGCAGCAGCCGTTCTGTGAGCTCTGGGTCCACCCGGACCAGCGAAGCATCTTCCTCCTCATCCTCATCGTCGTCTTCCTCATCCCGATCCCGGTCCCGGTCCCTCTCCCCCCCACACAAGAGGTGGCGAAGGTCCAGTTGCAGTTCCTCTGGACGTTCCCGGAGATGCTCTTCCTCTTCCTCCTCCTCATCTTCCTCCTCATCTTCCTCCTCCTCATCATCTAGTTCCCGAAGCCGGTCCCGCTCTCCATCTCCTCGCCGGAGAAGTGACAGGAGGCGGCGGTACAGTTCTTATCGTTCACACGACCATTACCAAAGGCAGAGAGTTCTGCAGAAGGAGCGTGCAATAGAAGAAAGAAGAGTGGTCTTCATTGGGAAGATACCTGGCCGCATGACTCGGTCAGAGCTGAAACAGAGATTCTCTGTTTTTGGGGAGATTGAGGAGTGCACCATCCACTTCCGTGTCCAAGGTGACAACTATGGCTTCGTCACTTACCGCTATGCCGAGGAGGCATTTGCAGCCATCGAGAGTGGCCACAAGCTGAGGCAGGCTGATGAACAGCCCTTTGATCTCTGCTTTGGGGGCCGCAGGCAGTTCTGCAAGAGAAGCTATTCTGATCTTGACTCCAACCGGGAAGATTTTGACCCTGCTCCTGTAAAGAGCAAATTTGATTCTCTTGACTTTGACACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCCTGGGCCCTTCTCCCCCATCCCCTTTTCTTTGGAGGTGCCCAACCTCCTCCATTCCCCTCCCCCAGTCTAGGGGAGAGAGCTGCTAGCGAGGAGATGACTGTTTTCTAAAGAAATGGAAAAAAGTGAAATAAAAATGTAATACATCAGATTTTAAGTGGTATTTGTTTTTTATAATAGGCTTTGAAACACATTAACTTGCATTCCTGTGTAAGATGGATGGGGTTGAGGGGTTCCCCCAGTGCAGACTAATAAACATGAACTAGAGAGA EMBV3_32161 CCAGGCCTTTCAGAAAACATGGAGTTGTTCCTTTGGCCACATACATGCGAATCTACAGGA Gene GeneID:782021|LOC782021:XR_084028:375_cdna Constitutive 0 NULL GeneID:782021 22 PSEUDO LOC782021 NULL similar to 60S ribosomal protein L21 EMBV3_35935 CTCAGCATCAGCCAATGGAGAGAGATGATTCTGGAATGGTAGCCCCCTCTAACATTTTTC Gene GeneID:509490|LOC509490:XR_083719:60_cdna Constitutive 0 NULL GeneID:509490 7 PSEUDO LOC509490 NULL similar to ANKHD1-EIF4EBP3 protein EMBV3_26718 GTGGAAGTGTGAGTCCTCCGTGTACTGGGTGAGCTTACAGGCCAGCTGCACACACTGGGA Gene BVT0102_233930 + 1 EMBV3_22040 GK000019.2:58579256-58620113 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32365 GCCAAAAGCCAGGAAAGGAGCATGTACGGAGGAGAAGACAGTATCACAGAACTCATATGT Gene GeneID:517589|NUDT9:NM_001101096:19_cdna Constitutive 2 NULL GeneID:517589 6 GENE NUDT9 NULL nudix (nucleoside diphosphate linked moiety X)-type motif 9 EMBV3_42962 GAGCTTAAGAGCTGTTTGTGTCCCACTGTTAGCCGCTTTGTTCCCTCATCTTTGTGTGGG Gene GeneID:518469|GPCPD1:XM_002692364:238_cdna Constitutive 2 NULL GeneID:518469 13 GENE GPCPD1 NULL glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) EMBV3_04054 CAACAATCTCATCTTCCGTCTCTTAAATGCAGTCAACCTAAAGGTTCGGTTTGACGTGTG Gene GeneID:540187|EML4:XM_002691295:394_cdna Constitutive 0 NULL GeneID:540187 11 GENE EML4 NULL echinoderm microtubule associated protein like 4 EMBV3_35010 AAGCAGTTGCCTAAAGGATGGTTCCTGTACTCTGTTATTTTTATTTGGAAGAAAGTTTTC Gene GeneID:507031|STX7:NM_001077864:5_cdna Constitutive 3 NULL GeneID:507031 9 GENE STX7 NULL syntaxin 7 EMBV3_32303 TACTGCAAGGCCTCAAACTCAGCGCTTATAAATACCACATCTGCTCCCTGATCTTCCCCC Gene BVT0101_056762 + 1 EMBV3_21312 GK000012.2:19385305-19400263 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37180 CAAGTTTGCCCGCAGTGATGAGAGGAAGCGCCACACCAAGATCCACCTGAGACAGAAGGA Gene GeneID:100297981|LOC100297981:XM_002698852:66_cdna Constitutive 0 NULL GeneID:100297981 28 GENE LOC100297981 NULL similar to early growth response 2 protein EMBV3_10791 CACATTGGTAAGTTCTTTGCACGTGATGCTGACATCTCTGTTAGGTTTGTCCTGTCATGG Gene BVV0102_136508 + 0 NULL GK000016.2:50686448-50687997 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34849 GAACACTCAACTCCTCTCACCACTTCAACCCCACTCAGCCCCACACACCACCATGACCGT Gene GeneID:777598|LOC777598:NM_001078145:246_cdna Constitutive 0 NULL GeneID:777598 19 GENE LOC777598 MGC143210 keratin associated protein-like EMBV3_12494 ACCAACCAGCCTCTCCAACTCTGTGGCAATTAGAGAATTAGCACTACTACCATCTGACCC Gene BVT0102_069443 + 0 NULL GK000003.2:107705847-107709949 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171202 1 XLOC_103765 Coding TCONS_00171202 XLOC_103765 Coding Coding MYCBP 3:107699303-107709388 = TSS127752 4762 2 TCONS_00171202_3 126 0.167576648467031 5 0.528262594208647 0.00291790638688681 0.00214974069895329 0.00248290769562743 0.00213605520645264 0.00328484994714421 0.00117273391441839 0.00221973511016578 0.00273686930084501 0.00440653003924545 0.00211172169062246 0.000965941742827212 0.000565599016599771 0.00079366324654559 0.00168246439042837 0.00171289223704259 0.00413295494649533 0.00160445089611541 0.00327735182994438 0.00334221413161968 0.00408346532323049 0.00198619519747046 0.0013837878445823 0.00204683761304273 0.0020285234568654 0.00204503028988607 0.00179347290173221 0.00199100233697739 0.000975274659455853 0.000536954169460893 0.000746887208595107 NM_001038565.2 MYCBP Bos taurus c-myc binding protein (MYCBP), mRNA. 0.0 913 99.80 0.106677866442671 NM_012333.4 MYCBP Homo sapiens MYC binding protein (MYCBP), transcript variant 1, 0.0 2594 82.63 0.538429231415372 TCONS_00171202_3 sp|Q2TBP7|MYCBP_BOVIN MYCBP_BOVIN C-Myc-binding protein; 2e-68 205 100.00 0.80952380952381 0 noncoding 0 0 0 0 -0.133876574106265 0.550393483267477 0.0110088752914762 0.835133189086005 GTGTCTACTTTACAGGGATGGTGTGAGGATTAAAATAAGAAACAGGTGTTTAACGCGCTGCCAGGCATACAGTAAGCGCTCAAAAGTGCTAGCTATTATTATCACATTACTGCTCACCCTCTGGAGACCCACATCAAGTCGGCCACAAAATAAGGAGACTCCAAACGACAGAGCTGGAGCCCAAACAGACGATTCTAAGCGGTCTTCCAGCCACTGGAAATCCAAGGGTTGCCCTCGACGGTCGTGCGCCCTCTTTCAAGACGAGAGTCCACACACCAGTAGGCGCCGCCTGCCACGGCTTCTGAGGTCCTAGTTGAGACGGGTCCGCCCACTCTCGGCGTCTCGAGTGAGTCCTAGCGCTCCAGGGCTCCGCAGGCCCCGCCCCCTGGCGCCACGCCCGTCTTTGGCCCCACCTGGACACTCGCCCCAAGTTACCAAAACCTAGCCTCCTACTAAGCAACCAAATCTTGGCGAGGACCGGAAGAGGAAGGAGAGGCGACGCTTCGCTAACCAGAGGGGCGGGTGCACGCAGCCTCCCTCGGCTCATCTCGCTATGGGGCATTCAGAGCGTCCTGGTCGCCATGAAAACAGGCCACACCCCGGCCATCCCGGCCCGGGGATCCCAAGTGCGCAGGCGTCCGTGCCCCTCCGCGCATGAGCAGTGCTGCTCCGAGCCCGCCAGCCACGGTCTCCGGCGCCAGCTACGCCGCTGCCGCTGTCACTATGGCCCATTACAAAGCCGCCGACTCGAAGCGCGAGCAGTTCCGGAGGTACTTGGAGAAGTCGGGGGTGCTGGACACGCTGACCAAGGTATTGGTAGCCTTATATGAAGAACCAGAGAAACCTAATAGTGCTTTGGATTTTTTAAAGCATCACTTAGGAGCTGCTACCCCAGAAAATCCAGAAATAGAGCTGCTTCGCCTAGAATTGGCAGAAATGAAAGAGAAATATGAAGCTATTGTAGAAGAAAATAAAAAACTGAAAACAAAGCTTGCTCAGTATGAACCACCTCAGGAGGAGAAACGTGCTGAATAGGATTCTTCTCAGTTGAAAAGACACTGAAAAAAATGGTTTTGTATGACTCGAATAGTTTGTACAGTATATAATCTTTTCTGAACAGATGCTATAGCACTCTTTTAAATATGTTAAATTCACCTATCACACGTTAACTGTTATAAACACATATACTTAGAATCACCAATAAAAACTCAGTATAACTTTCTTTGGGTCTTAAAAAAGCAGGAGAATCAAAAGTGAATCCTGGAAAGAAAAAAAAAAATCTATAAACACAGCCATCGAATTCATTACCTTAAAAGACATTCTATCAGTCTGACTAGGAATGATGGTACTGGTTGTATTTTAGCCAAGGAAGTTTAGCACAGAGCTATTCCCTGGTTTAGCTCAGGATTATGAGCACAGGTACAGTCATTCTTTAAAATGAAGATGACACTGTTGTTTTATATTCTCTGTAGGCAGCTGGAGAGATCTGTGTGATACACGATGCTGTTTCATGGGGGTCTCATGAATCTTCTGCTCTTGTTTATATTAGGTGGAACGAATGACTCTTTGCCACCACTTTGCCTTAGATACTGTGTGTGTGCCAGTGTGAACTCTGACACCACCTTTCCTTCTATGCAATCATGCCCTATCTGATACTGTTGCCTTGCTTTACTGTGCTTCCCTGGGTCCCAGTTGCACATTGGCCTTTCTGTGTTGTTTTTCAATTTCCTGTAATAGCAGTTACCCTGACTGTAATTTATATAAAGAGGATCACACTGTTCCCCTGCCTTACTTAGTTGCTTAGCGGAACACAGAACAGAGGCAATTTAAAATTCTGGGTTCACGCACAAGCCTGGATGACAAGGGGAATGAGCCATATATTGTGGAAAATTATAGTTTGTGGGTATAATTATATAGTGCTTTTTCCCCTCAAAGTATTTTTCTAGCTTTGAATTCATTTTATCTTCATTATCCCTGTGAAGTAGGTAGGCAAGTGTGAGGGGAGGTGGGGTGCTGAATCTTTAGGCCAAAGACTGATATGAATACCAATTATTTACCAATTGTAGAACCTTGGGCACATTAGTAAATTGCTCCAAGATTCACTTTCCTCATCTGTCAAATGAAAATAATATCTGTGCTGCCTACCTCACAGGGTTGTTGTGAGGGTCAAATGGAATGTATATGAAAGATTTGTAAATGGTAAAGCACTATATTCTTGTTTGTTAGTCCTTTTTCCTTTCTTGGAAGACCTACAGTCAGATGTTTTTGTGTTACTCTTCACTTCTTTTCCTTATTGATTGATTAGCATTATTAAGAAGTAGCCCTATCTCATGTACTTTGTCCCCAGTGTTACAGAAATGTCCTTATTTTTTGGTCAAAACACACAGAGAAAACCATACAATGAAAGCTGGTTTTTAACTAGCAGAAGCCTCAGCACCTGCTGGAAGCTGTGACCAAGCCAATTATAAGGGCATCTTAATCAGTCACAGTGGCAGGAATGTGGCAGTGGTCTGTCTCTTCCAGTCACAGGTTTGTTTTTGTAGGGGAATCAGATATGGCTGGAAGAACATTTACTTGAATTGGTTTATCTTTTACCAGTTTGAGTGCCTCCTACAGGGACAGCAGTGGGCTGAGTATTATAAAGATGAATGACTTGAAGTTAACTATAAGACATGTATATAATCACAATGTGGGATAGGATGTGCTAAGAACGATAATAATAAAACATGGCCTCCTGGGGGGTTTTGGAAGAGAGGGAGACATGGCTTCTTTAAGCAGTTGGTGTCATAGTCCCTTTGTGGACAGGCAAGTAGAAATTTTTTCTGGCAGCCAACCCTTATTTGCTTTTTTCCCTAATGAGACTGGTATTAATATTTATGTAAATCAGATGATTGTCTCCTGTACCATCCTTTTGAAAAATGGCAACCTGTGAGTTGGATAATCAGACTCTTGGGGGGAACTGACATGCTTACACTGCTGTATCAGTCAGTGCTATGTAAGAATTCAGGGTGAGCCTGGCCTCTGCAGGTCCTCTTCAACATTTCTATCAAGGATCTGGATGAAGACAGTGTACATGATGCTCAATGGAGTAAAAAAAGGATCCGATCTGTTCAGTTCCTGCTGTTCCAGCTGCCTTATCTGTAAAATGTAGATTTCATATCTTGCCTATCTCACAAGGTGTTCTAAGGATTAAATTAAATATAATGGATGTAAAAAGTACCTTGCAAATTGTAAAGGACTACATATGGGTCAGATGGTAGTAGTGCTAATTCTCTAATTGCCACAGAGTTGGAGAGGCTGGTTGGTAGACTATATTGAGATGAGCTTGAAAATGATTCACAACTTGGGAGTGCCTAAACTTCACGGCCTAAATGAAAAAGCTGAAATATCAAGTCTTACATTGAGGTTAAAAATGCAGCTGCACAAGTTTAGGCACTTAGGGATTGCTGACAAAGTACTGGTTCCAGTGACTGTTAGTGTGAACCACTTACAGTCTGTACATTTTTTTAAAAATTCCATTCTGGAAAGCATTAACAGAAATACTGTCCAGGTGCTAAACAATCACCCTGAAGGCTCTACTGGTCCTTACTGTAGGTGTCAGACATTTGATGGATGTTGACAAGCTCAATTGCATATAAATGTGGAGAGTACATTTGAAACCACAAAGCTGTATTGTCCAACATGGTGGCCGCTAGCCACATCTGGCAAGTAAAATTAAAAATTCAGTTCCTGAGTCACACTAGCAGCAATTTAAGTGCTCAATCCACACTGGCTACTATGTTGAGCAGTATAGATGTGGAACATTTCTGTGATCACACGAAGTGCTATTGGACATTACAGTAGAAGGCCTGGCTAAAGTATGTTTAATGTGGAACAGAAGACTGGGTAATGAAGACTGTAATCCAATATCTGAGGTGCTGTCATAAAAAAGATGACCACTGCTAATAGACTGTGGTGTATAAGCTCCAAGGAGTGTGATTTTTGGCCTGAATAAGAGACTTCTATGCCAAATTTTACTACAGTGGAATTGTTTGCCTATTGAGATAGTGAGCTCTCTTCCCTGGGCTCTACTGAAATGTATGCTGCAAGTCTTTCATGCAGCGTCAGAAACGCTATACAGTGGATTCTTTTTAGGTGAGAGGTTGCACTAGATGACCTCTAAGGATGTCCTAGCTTTAACTTCAAGATTCAGACAAAACCAACTTCTAGATTTGCATACCTGCTTTCCCTTCATAATCAAGAAAGTTTCCTTGAAAGATCAGTACCACCACCCATGTCCCCGTTAAGAGAAGGACCTTTTTTGGTTAAATTTCCAATTCTAAAGCCTCCCTGTGAAGAGTAAAATTCCTCTAGTTTTCCCATATTTTGGTGACAAGCATTTGTTCTGGTCAGCTTTCATTATTAATTCCTTTGGTCTCTGATCTGAAGGAGATCGCACAAGATGCAATGTTCCACGGGGTGATGGAATTACTAAAGAAATAGATACTGGGTGGGGAGGAAAGAGGAGTCAGATCCTGGTAAGTGTGAAACAGTAGCAGTATTCATTGTCAGTGATTTGCTGAAGAAAGAGGGTAAAACATTCTAGCTTGCTGGCATTTGCTTTCCCATCAGGGTCCAGCTACCTGCTAGAACAAACTATCTCACCGATGACTCTGCCTTGTTTGAGGTTTTGCCCTCACTCTGGCTAGCTTCTCCTCTCTACCTTTGAACATCCCAACCAATGCCATCCTTCCAGACCTGTTCAGACGCCAGCTCCTTAGAG EMBV3_22173 CCTCGGCCACCACGCCGTTCCGGGTCACGAATCAACAGAGAATAGTATATATGCAGCTTA Gene GeneID:100337409|LOC100337409:XM_002691540:595_cdna Constitutive 0 NULL GeneID:100337409 11 GENE LOC100337409 NULL disabled homolog 2 interacting protein-like EMBV3_18036 CCATGAATCCTTTATTAAGTCTGCCTCTTCCCAGAAGTAAATTGGAGGAGCCTTTGGGCC Gene GeneID:337886|S100A11:NM_001098856:37_cdna Constitutive 0 NULL GeneID:337886 3 GENE S100A11 NULL S100 calcium binding protein A11 (calgizzarin) EMBV3_03088 TCTACCGCGCCGCCCAGATCATCCTCAACTGACCTGCTGCAGTCAGAGTCAACCTCCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17948 TCAGTACCAAGAGTGATGGGGCAGATTATGCCAGTTGGTATTGGAGTGATGATGTCAAGG Gene GeneID:530472|LOC530472:XM_002696660:270_cdna Constitutive 0 NULL GeneID:530472 21 GENE LOC530472 NULL similar to novel G protein-coupled receptor protein EMBV3_36233 CTAACCTTTCTATCTTGTTGGTTTGGAGACTACTTGGCTTTTGCCAGCATCCTCTGTGGC Gene GeneID:514644|PHACTR4:NM_001102007:161_cdna UTR3_Alt 2 NULL GeneID:514644 2 GENE PHACTR4 MGC151764 phosphatase and actin regulator 4 EMBV3_33810 TGGTATGTAACAGCGACCGCGTGCTCAAAAGAAGTGCTGAAGGAAGCAACCCTCCTAAAC Gene GeneID:534712|RB1:NM_001076907:157_cdna UTR3_Alt 2 NULL GeneID:534712 12 GENE RB1 P105-RB PP110 RB11 retinoblastoma 1 EMBV3_33067 TATTTCCGAAACATGAAGCGCGCCCGAGGCGGCTCTAAGTCGGACAAGGACAGCGTCCAG Gene GeneID:539213|LHX3:NM_001038620:175_cdna UTR3_Alt 2 NULL GeneID:539213 11 GENE LHX3 NULL LIM homeobox 3 EMBV3_31677 CTATCTCTTCATCCATAAACTGGGGGAGGGAGAGGTACGCTGTGGAATGAGATAGAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33658 CATATGTGGAAGGCTGCTGGAGGGTTGAGGATGGTGTAAGGGCCACATCATTTAGTAGTG Gene GeneID:618250|S100A14:NM_001079634:239_cdna Constitutive 1 NULL GeneID:618250 3 GENE S100A14 NULL S100 calcium binding protein A14 EMBV3_21786 GGGTCTCAAAGAGTTAGACGGGACTGAGCACACACCCAAACACTTAGTAAGTCAAGATAC Gene GeneID:534488|SLC35A5:NM_001076025:95_cdna Constitutive 1 NULL GeneID:534488 1 GENE SLC35A5 NULL solute carrier family 35, member A5 EMBV3_42287 TACCTGCCACCACGGGTTCTAGGGGCAGAACTCGCCCTCCGCGGCAGCTCTGGAATTCAA Gene GeneID:100294744|LOC100294744:XM_002691351:178_cdna Constitutive 0 NULL GeneID:100294744 11 GENE LOC100294744 NULL hypothetical protein LOC100294744 EMBV3_39511 TAGACTGAGTAAAATGTTTGCATAATAGGTTCCAGGGCGGGGATGTGGTGCCTGCGGGTG Gene BVV0102_175327 - 1 EMBV3_30804 GK000019.2:28524592-28541732 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25237 TACAGGGCACACCCTTTACCAGAATAGGAGTCTCGGTCTCTATCCACGGTGCTGAAAGGC Gene GeneID:100335696|LOC100335696:XM_002688864:225_cdna Constitutive 0 NULL GeneID:100335696 7 GENE LOC100335696 NULL hypothetical protein LOC100335696 EMBV3_04745 TTGGCACACCAAGAAGCTGCCCCATAAGACCCAACAAGGGCTGTGCAAGGTTGCCTATAT Gene GeneID:616840|LOC616840:XR_083586:128_cdna Constitutive 0 NULL GeneID:616840 1 PSEUDO LOC616840 NULL similar to ribosomal protein L3 EMBV3_43012 AGGGATACTGTATACTCTGGGAGGGGAAAAATCAACTGTGTACTCGGGCAGAGATAGCTC Gene GeneID:100301250|LOC100301250:XM_002696845:679_cdna Constitutive 0 NULL GeneID:100301250 21 GENE LOC100301250 NULL similar to RAP2B, member of RAS oncogene family EMBV3_26370 TGTGGACCCTCAGCTAGAAGAGACAGTGGAGGGCTCAGGAACTTCGAGGAAACAGATCTA Gene GeneID:100297047|LOC100297047:XM_002698583:165_cdna Constitutive 0 NULL GeneID:100297047 26 GENE LOC100297047 NULL hypothetical protein LOC100297047 EMBV3_33988 TCACCTCTTCCCCCTTTGAGGTGGTGGGTTCAAGGAACAGGAAATCAAGCCTGGGGTTTT Gene GeneID:281414|PNOC:NM_174150:37_cdna Constitutive 1 NULL GeneID:281414 8 GENE PNOC NULL prepronociceptin EMBV3_15731 AAAATCAAGAAGCAGCTGTCGGAGCAGGACCTCCAGCAGTTGAGACTGAAGATCAACGGA Gene GeneID:532191|OLIG3:XM_002690272:14_cdna Constitutive 0 NULL GeneID:532191 9 GENE OLIG3 NULL oligodendrocyte transcription factor 3 EMBV3_06037 GGATCCAGAGTAAAAGGGAAGACATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAAT Gene GeneID:534407|RIPK2:NM_001034610:61_cdna Constitutive 0 NULL GeneID:534407 14 GENE RIPK2 MGC127456 receptor-interacting serine-threonine kinase 2 EMBV3_28655 GCATATTTGTGTGGTGGTACAGCCATAAGAAAAGGGATTTATAAACTCTGTACACATGAG Gene GeneID:512960|CCNG2:XM_002688361:173_cdna Constitutive 0 NULL GeneID:512960 6 GENE CCNG2 NULL cyclin G2 EMBV3_05084 GGAAATACAGAGGCAGTGAAATAGAAGACTTAGTACTCCTCGATGAAGAATCCAGGCCTG Gene GeneID:513265|CDKN2AIP:NM_001046143:46_cdna Constitutive 1 NULL GeneID:513265 27 GENE CDKN2AIP CARF MGC137334 CDKN2A interacting protein EMBV3_00634 TTGAGAGAAGTGGTGGTCTCTGAAATCCGGTGTGTTCCACGTGCAGCTGTGTTAGGATTG Gene GeneID:504752|EIF5:XM_002696846:682_cdna UTR3_Alt 2 NULL GeneID:504752 21 GENE EIF5 NULL eukaryotic translation initiation factor 5 EMBV3_34206 ACCTGGTCTAGTGAGGAGGTGGACACCAGCCAGAGTTGCAAAAACAAGAGAAAGAAGCCA Gene BVV0102_076599 + 0 NULL GK000018.2:52074917-52081110 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08140 TGCTCAAGTTGTGACTACGTGCTCTGGAATACTCTCTTATCCCTTTGACACAGTTAGAAG Gene GeneID:541168|SLC25A31:NM_001046500:56_cdna UTR3_Alt 2 NULL GeneID:541168 17 GENE SLC25A31 MGC134063 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 EMBV3_24701 CACTTCTTGCACGGGAGAGTAAAGAGGATTACACGGTGCTGGAGGGGTGAAGATGGTGAA Gene BVV0102_195440 + 0 NULL GK000012.2:20456764-20512063 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07874 TAAGAAACGATTAAAATTACACTCGTGCTGTGCGCCCCTTCGTCCCTTGCTACTCCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30218 TCAATAATGGCACTTTTCCGAGTGGATTTCAGTGGTCGTGGGGAATTGGCTGAACGGCAG Gene GeneID:618398|DMC1:XM_002687925:142_cdna Constitutive 0 NULL GeneID:618398 5 GENE DMC1 DCM1 MGC133645 DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) EMBV3_42156 CAGTGACCGGGGGAAAGCAGTGGGAGGGATAAATTGGAAGATTGAGACTGATACACACAC Gene BVT0102_245689 + 0 NULL GK000002.2:108260786-108272819 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103379 1 XLOC_062094 Coding TCONS_00103379 XLOC_062094 Coding Coding STK11IP 2:108243940-108262483 j TSS76770 4706 1 TCONS_00103379_5 1070 0.177433064173396 26 0.747600043145292 6.0956929014788e-05 5.63064021648521e-85 6.369539678715e-112 3.22353147154125e-05 6.24813488895785e-78 7.64139006786727e-06 3.73705653017488e-05 2.37613440376702e-15 1.27352243663436e-05 3.09356665272861e-06 1.7063937618246e-06 7.64704303116048e-06 2.13252406623745e-06 4.56629535937165e-36 6.35068754811459e-06 0.000758893933539265 0.00161732392012075 1.5094257174355e-05 1.1647487971111e-05 6.49946959328845e-05 3.94044622691326e-51 3.70104483791537e-05 0.000440445357066463 2.02281960554424e-05 8.67107711220705e-122 2.70720712634548e-05 9.12276432898297e-05 5.29268194266858e-05 0.000271528383844318 0.000105540264387785 XM_002685595.2 STK11IP PREDICTED: Bos taurus serine/threonine kinase 11 interacting protein (STK11IP), transcript variant X1, mRNA. 0.0 6277 100.00 0.739269018274543 NM_052902.2 STK11IP Homo sapiens serine/threonine kinase 11 interacting protein (STK11IP), mRNA. 0.0 3342 80.70 0.732681682957926 TCONS_00103379_5 sp|Q8N1F8|S11IP_HUMAN S11IP_HUMAN Serine/threonine-protein kinase 11-interacting protein; 0.0 1568 77.81 0.998130841121495 2 coding 0 0 0 0 0.0632165234921482 0.547177231106355 -0.0324467064731499 0.52167585842896 ATGGCCCTCCAACGTCCTGTGGCCATGACGACCGCCCCGCGGGACTCTCTGGTGTGGAAGCTCGCGGGGCTTCTGCGCGAGTCCGGGGATGTGGTGCTGTCTGGCCATAGCACTCTGACCCTGCTGACTGCCACATTGCAGCACCTGAACCACGTATTTGAGCTGCATCTGGGGCCATGGGGCCCTGGCCAGACAGGCTTTGTGGCTCTGCCGTCCCACCCTGCTGACTCGCCCATCATCCTCCAGCTTCAGTTCCTCTTTGACGTGCTGCAGAAAACGCTTTCACTCAAGCTGGTCCATGTCCCAGGTCTTGGCCTCTCAGGGCCCATCAAAATTTTTCCCTTCAAGTCCCTTCGGCAGCTGGAGCTCCGAGGTGTCCCCGTCCACTGCCTCCGTGGCCTCCGTGGCATCTATTCCCAGCTGGAGACCCTGATCTGCAGCAGGAGCCTCCAGGCATTAGAGGAGCTGCTGTCAGCCTGCGGTGGTGACCTCTGCTCTGCCCTGCCCTGGCTGGCTCTGCTGTCTGCCGACTTCAGCTACAATGCCCTGACCGCCTTAGACAGCTCCCTGCGTCTCTTGTCAGCTCTTCGCTTCTTGAACCTGAGCCACAATCAAGTCCAGGACTGCAAGGGCTTCCTGATGGATTTGTCTGAGCTCTGTCACCTGGACATCTCTTATAACCACCTGCGTTTGGTGCCAAAAATGGGACCCTCAGGGGCTGCTCTGGGAACCCTGATTCTGCGGGGCAATGAGCTCCAGAGCCTGCATGGCCTGGAACAGCTGCGGAACCTGCGGCACCTGGATGTGGCCTACAACCTGCTGGAGAGACACAGGGAGCTGGCACCGCTGTGGCTGCTGACAGAGCTGCGCAAGCTCTACCTGGAGGGGAACCCTTTGTGGTTCCACCCTGAGCACCGAGTGGCCACCGCCCGGTACTTGTCGTCCCGTGCCAGGGACACTGCTGCTGGGTTCCTTCTCGATGGAAAGGCCTTGTCACTGACTGATTTACAGACCTCCACGTCCTCGGGGCTCAGCACCTCGGTACCACCTCCGCCCTGGCCAGTGGGGAGTACGATCGAAACCTCCGGTGGCCCTGACTTGAGTGATAGCCCCTCGTCAGGGGGCGTTGTGGCCCAGCCTCCACTCCGCAAGGTGAAGAGCCGAGTCCGCGTGAGGCGGGCAAGTATCTCGGAACCCAGTGACACCGACCCAGAGCCCCGGACACTGGACCCCTCCCCAGCTGGGTGGTTTGTGCAGCAGCATCGGGAGCTGGAACTCATGAGCAGCTTTCGGGAGCGGTTTGGCTGCGACTGGCTGCAGTATCGGAATCACCTGGAGGCCTCTGCCCTCAGCACGCTGTCCCCGGACGCCCCGAGCCCAGGGCCTGCACCCAGCCCTCCACCCCCTGAGAAGGAGTCTCCACAGGAAGTGGCAGAGGAGGTCTGGCCGGAGCCGGAGCCTCGGGAGGAAGAGGATCTGGAGAAGCAGGGAGAAGAGGAGCTGGAGAAGCAGGGAGAAGAGGAGGGAGGAGAGGAGCAGAGTGAAGTGGAGGTGGAGCTCTGCCGGCCCATATTGGTGTGTCCCCTAGAGGGGCCCGAGGGCGTGCGGGGCAGGGAGTGCTTTCTCTGGGTCACTACGGGCCACCTGTTTGAGGTGGAACTCCAAGCAGCTCGAACCCTGCAACGGCTTGAGCTCCGGAGTCTGGAGGCAGCTGAGGTAGAGGCAGAGACCCAGACCCAGAGCGAGCAGGTGCCTGAGAGTTCAGATCCACAACCCCAGGGCCCCATCCTTGTTCTCCGCTTCTCCTACATTTGCCCCGACCGGCAGCTGCGTCGCTACGTGGTGCTGGAGCCGGATGCCCAGGCGGCTGTCCAGGAGCTGCTAGCTGTGCTGACCCCAGCAGCCACCTCTCAGCATCAGCTTGAGGAAGCGGGGGCCCCTCCAGGGGACAGACTCCAGTGTCTGCGCTGTGGCCGTGAGTTCAAGCCAGAGGAGCCCAGGTTGGGGCTGGATGGTGAGGAAGGCTGGAGACCACTGTTCCGGAAGACAGAATCATCTGCTGTGTGTCCATACTGTGGCAGTGATCACGTGGTTCTTCTGGCCGTGTCCCCGGGAACCCCCAGTGGGGAGCGGAGACAGGAAGAGCAATCCATGGCCCCTTCGCAGTCCCTGAGCACTGTCCACGACCCTCCTGGCCACAGTGACCCCAGCAACGGGGCTGGCAGTGCCCCATCCCAAGCCCTGGCCTCCCATGACCACCACAGTTGGAGCCTCAGCCCGCCCCCTGAGCGCTGTGGCCTCCGCTCCGTGGACCACCGACTCCGGCTCTTCCTGGACGTCGAGGTGTTCACCGATGCCCAGGAGGAGTTCCAGTGCTGCCTCAAGGTGCCGCTGGCGTTGGCAGGCCACCCTGGGGAGTTTCTGTGTCTCGTGGTTGTGTCTGACCAAAGGTTCTACGTGTTGAAGGTGACAGGGGAGATCTGCGGGCCCCCAGCTAGCTGGCTGCAGCCGGCCCTGGCCGTTCCCCTGCAGGATCTGCGGCACATAGAGCTGGGCCTGGCAGGACAGAGCCTGCGGCTGGAGTGGGCAGCTGGGTCAGGGGCCTGTGTCCTGCTGCCCCGAGAGGCCAAGCGCTGCCGGGCCTTCCTGGAGGAGCTCACCGATGTCTTGCAGTCCCTGCCCCCAACACGGAGGAGCAGTTTCAGCGCCACGGAGGAGGAGGTGACCCCTAAGCACAGGCTCTGGCCACTGTTGAAGACAGAGTCTTCCTCGGAGCCTCCCCGGTTCTTCTACCTTCGAGTGTTCCTGGATGAAGGACCGGCTACCTGCCCTGTGTCCCTGTTGCTGACTCTGTCCACCCTGTACCTGTTAGATGAGGACCCTGCAGGGTCCCAGGCAGAGCCCCCTTCTCCAGCAGCGTCTGGCGAAGCATCTGAGAAGGCCCCACCCCCCGGGCCAGGCCCCTCAGTGAGCGTCAGGGAGCAGCAGCCCCTCAGCAGCCTGAGCTCTGTGCTGCTGTATCGCGTGGCCCCAGAGGCTCTGCGGCTGGTCTTCTACGACGAGGTGTCCCGGCTGGAGAGCTTCTGGGCACTCCGCGTTGTGTGTCCGGATCAGCTGACGGCCCTGCTGGCCTGGATCCGGAAGCCCTGGGAAGAGCTGTTTTCCATCGGACTCCGAACTGTGACCCAGGAGGCTCTGGACCTTGACCAGTGAGGCTGCTGGGCTCGCCCCGCCCCTGCCGTAGAAGCCACCGCTACAGATGTCCTCTCTCCAGACTCTGGCCACTGACTCGTCTGGGCACTGGCCAGCAAGGCCCCAGCTGACCCCCAGCGCACGGGCAGGGTGAGAGGACTAGTCTGGCAGGGACTAGTTGACCTGGCCCCAGGGGATGGGCCAAGTGGTCAGGAGTGTTTCTCCTGTGCTTTCCTCAGGTATCAATAAAGCTGTTTCCATTCCAGATGCCCTACGGGCACCTGGATGTGTCACTTGTGAGGCCTGGTGTCCTCCCACTTCTTACAGAAACTGCCCTGCCCGTGGCTCTTCCATAATGGACCAGCCAGGCAACCTCATTTGAACTGCGACACTAACCATCTTCCAACCCTGCTTTGGCTCCACCGATGGGATCAAGTTGGACTCCTACCCACGGGTACTCGTCCTCAGCCAGCAGCGCCTGTCATGTGACCTGGCGAGGAAATCCCTGCCCAGCCAACAGCTGGGCCAGTTAGGTTCCCACTCTCTCGAGTTTCAGCTGGGGACTAACGAGCATCTCAGGCCACTGGTGGTGCAAGCTGGAAAGGAGTGTGACTGGGGAGCGGGTGTGTAGAGCCGGGCTGTGGAGGGAGGGCAGGCGGGCAGGTATCTGGGGGTTTCCATCCCTGCCTTCTTCTCTCCTGCACTGCTTTGTTCAGCTCAGGGCCTGGGTGGGTTGACCCCACTGCTTTACCTGTGTCTCCACAGCCATGGTGAGTGGTTCAGGAATGCCCATGGTTTGGCCTCCCAGGCCTCAGGCCTGGCTTTTTGCCAGAACATCCAAGAAAGAGGCAGGTTTCCCCCAGGAGGGCTGCTGAGAGAATAGACCTGCAGCTGCTGATCGTGAAAGGGGAGTAACCAGGCCGAGAGAGGGAGTCAGAGCTGAGGTGAGGAAACTGAGGCTGTGAGGAGGTGAATGACTGGCCATGATCCCGTCAGTAAGTAGAGGACACCTGATGATGTCCAGGCTCAAATGACTTCAAACCTGGGGTGTCAGCAAAGCAGTGTAAATGTCCTTTAACAGAGGAATGGATAAAGAAGACATGGTACATATATACAATGCGATATTACTCAGCCATATAAAGGATGAAATAACAGTATTTGCAGCGACATGGATGGACCTAGAGATTGTCATAGTGAAGTATGAGACAAATACTGTATGATATTACTTTTATGTGGAATCTAAAAAAACGGTACAAATGAGCTTACTTCCAAAACAGAAATAGAGTCACAGATGTAGAAAAAAAATGTTCAGTGACCGGGGGAAAGCAGTGGGAGGGATAAATTGGAAGATTGAGACTGATACACACACTCCTATATACAAAATAGATAATAAGGATCTGCTGTATAGCGGAGGGAACTCAAACTGTAATGGCCTATGTGGGAAAAGAATCTGAAAAATAATGGAGATGCATATGTATATAACTGATGCACTTTACACCTGAAGCTAACGCAAT EMBV3_01116 AAGGAGAGGTGTACTGTGCCAAGTCAGGCAGGAAGTTCTCCGGCCAAATCCGGGAGAAGT Gene GeneID:521399|LOC521399:XM_002692631:92_cdna Constitutive 0 NULL GeneID:521399 14 GENE LOC521399 NULL similar to Protein FAM83A EMBV3_01066 AGGAAGGAAATGGAGCAGCTGGTGCTGGACAAAAAAGAGGAGGGGACAGTCGCACTGGAA Gene GeneID:509355|SYAP1:NM_001034348:6_cdna UTR3_Alt 3 NULL GeneID:509355 X GENE SYAP1 MGC127250 synapse associated protein 1, SAP47 homolog (Drosophila) EMBV3_38730 GGGGCCCAGTACTTCCGGCGCATCAGTGAGTCTGGCATCAAGAAAATGTGTAGGAACATT Gene GeneID:537690|EXOC4:NM_001102207:21_cdna UTR3_Alt 2 NULL GeneID:537690 4 GENE EXOC4 MGC160074 exocyst complex component 4 EMBV3_07437 CTGCTCTGAAATACTTTTGGGAACTGTGGAGCTTCTCCCTGAAGGGTCCAAGGCCTGTCT Gene BVV0102_320184 + 0 NULL GK000003.2:20825681-20847971 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172485 1 XLOC_104143 NonCoding TCONS_00172485 XLOC_104143 NonCoding NonCoding - 3:20836053-20837218 - TSS128461 1051 1 TCONS_00172485_1 102 0.352997145575642 2 0.0987972508591065 1.59639894776396e-10 0 0.000316978256954666 3.16044698042878e-05 0.000174596057394463 0 2.74452603613416e-10 0 1.50488767759806e-09 0 2.16795049563414e-06 0 8.19014778764485e-05 0 0 0.000150779920088427 0 2.3745683610561e-05 0.000313854431372458 0.000136848446757411 0.000193764941509058 0 0 0.00017546243360167 0.000260387433797555 8.25457533779285e-08 0.00028989057633758 4.79280222725796e-05 0 0.000106749684789596 XR_083738.3 LOC100298923 PREDICTED: Bos taurus uncharacterized LOC100298923 (LOC100298923), 2e-54 217 91.50 0.144624167459562 0 noncoding 0 0 0 0 -0.123536549403794 0.304136910041834 0.00280497028266768 0.951747562320833 CGGAAGGGGAGGAGCGCTAGCCATCTGGGCGAGACCTAAAGAAAAAGGCGGCTGGAATCGGCGGCAGCAGCAGGGAGGGAGCAGGTGGAGAGTACGAGGCGGCTGTCCAGTAGAGCACTGATGACTTCCCTGCTGGTTCCGTCACCGTCAAGAGCCAGGAAGGGACCCTCGGCCGGCAGAGTGTGCAGGCTGCTGGGCAGGGAGCCCCCAGGCTGCTCTGAAATACTTTTGGGAACTGTGGAGCTTCTCCCTGAAGGGTCCAAGGCCTGTCTATTCCGGAAGACATTTCCGGGGCTGAGAACGAGGCCCCAGAGGGGACTGATGCAGCTGGCTGGGAGAGAGGAGGAAGGGCTAGACCGAAGCACAGTTATGGAGCTGAACAGGCAACCGGGTGTGGAGAAGAGTTGTTTTTCACCTTCCAGCCTGTAGGAGGGCCCTAAACGCATTTGGGGATCACGGGAGCTTCTGCTCGAGTCCAGGCCCGCTTCAGAACACACGGGAAGTTACTAGTCTGAGAAGGAATCTCTGTACCAAAATATACATACCATTTTAATACTTCTGTATCTAATGTTGCTGACAGTTATGTACTTTTTCTTTCAAACTTAAATTTACTAAAGAATTTTCTTTCAAAGAATCAGATTATGATTTTAATTGTTTTGGGGGAGTGGGGAAGTCTGTTCCATTGATTTCTATCCTAATTTATTTTTTCTGCTTTCCTCGGGTTTTATTATTCCTTTATTAGCTTTTAATAGCTTTAACTCATTGTTTTTAATAGTTCTTATTTTCTCATAAATGCATTTTAAAGCTATGAATTTTCCTCTGACCTCTTCATATAGGTTTTAAAATGTAATGTTCACTTTATTTCTAAGGAGTATATAATTTTTATTTTGATATCTTGCAGTTCAGTTCAGTCGCTCAGTCGTATCCGACTCTTTGTGACCCCACAGACTGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAAACTCATGTCCATGGAGTCCATGATGCCATCCAGCCATCTCATCCTCTGTCG TCONS_00169037 r 3' 10374 TCONS_00172488 s 3' 10754 EMBV3_30472 GTGCCTTGAGCGACTCCAGAGCCAAAGCTCATTCTCTAAGGTACAATTTGAAGTCATCAC Gene GeneID:100337069|LOC100337069:XM_002691935:1_cdna Constitutive 0 NULL GeneID:100337069 12 GENE LOC100337069 NULL multidrug resistance-associated protein 4 splice-like EMBV3_16521 TCCCTAGAGGAAGCCAAGAAGAAGAAAGAGCTTGAGGAGTTCCTAAACCAGAGCTCCCCC Variant GeneID:280750|CLU:NM_173902:34_cdna 298^468 2 EMBV3_16075 GeneID:280750 8 GENE CLU NULL clusterin EMBV3_39926 TTCAGAGTGTATGTGAAACTCCCCAAAATCCATACATTGCTCTGTTGAAAGGACGCCCAG Gene GeneID:535033|LIX1:NM_001078003:23_cdna UTR3_Alt 2 NULL GeneID:535033 7 GENE LIX1 MGC142689 Lix1 homolog (chicken) EMBV3_21098 AGTGCTTCAGGAACCTGATGGAAGGAGTGGAGCAGAACCTGTCTGTCAAGAACAGAGACA Gene GeneID:533085|LOC533085:XM_002696267:59_cdna Constitutive 0 NULL GeneID:533085 20 GENE LOC533085 NULL similar to RAN binding protein 17 EMBV3_25738 AATCCAGCTTCTCAGAATACAGCCGGTTCCAAAGTCGGGGCAGGGTTGATACAGCATAAG Gene BVT0101_041207 - 1 EMBV3_42733 GK000008.2:86491829-86579158 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233239 1 XLOC_142721 NonCoding TCONS_00233239 XLOC_142721 NonCoding NonCoding - 8:86570463-86570801 - TSS174743 338 0.603550295857988 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000381364392370935 0 0 0 0 noncoding 0 0 0 0 -0.0306413390919612 0.765082906420189 0.0330030076104743 0.57517094127943 GCCCCCGCAAGCTGGCTCCGTAAACTTTGACATGCCATCATCATTTTTTCTTTTTTTTTTTTTTTGAGCATTTTCTTTACCATGTAATACATGGTCCAGGCTTATGCTGTATCAACCCTGCCCCGACTTTGGAACCGGCTGTATTCTGAGAAGCTGGATTCCTTTTCCCAGGCCATGACTTAGAGATCACGGTCTGGGAGCTGGGGGTGCTCTGAGATCCCAGTGGCCAGCTGCAAAACTGAACAGACAGAGCCAGAAACACATGATGGGCAATGTGTTCAAAACCTGACATATACAAACAGGCACCTCACTGTGCTCCCTCATATTCCCCGCTGTGG TCONS_00228552 TCONS_00228553 . 3' 114926 TCONS_00228552 TCONS_00228553 . 3' 115263 EMBV3_18336 TTTAAAAACCAGAAGGTATGGGGCTTCCGTGGTGGCTCAGTAGTGAAGAATCCACCTGCC Gene BVT0101_029676 + 0 NULL GK000019.2:19036606-19044189 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28068 CGGCAGGAGATGGTTCGGTCTGTCTTAGAGCCAAGTAGCCTCCACCTCACAGCAGCCCTC Variant GeneID:785267|CCDC84:XM_002693129:565_cdna 557^621 3 EMBV3_30608 GeneID:785267 15 GENE CCDC84 NULL coiled-coil domain containing 84 EMBV3_42806 AAAGTGGCTTGGAAGTCTTAGGTGGTTTGTAACAAATTCTTTAAAAAAATTTTTAAACAG Gene GeneID:541080|FUBP3:NM_001101217:190_cdna Constitutive 2 NULL GeneID:541080 11 GENE FUBP3 NULL far upstream element (FUSE) binding protein 3 EMBV3_30296 TGACCCTCCAATTCCGCTTCAGGGCTCAAACAGATGCCTCACCCAAAAAGAGACCACCTA Gene BVT0101_029146 + 0 NULL GK000027.2:19014505-19018671 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07115 TGTGTTGGACATACGCGGCCCTCAGGTGTCTGTGTGAAGCGTCTGAGATGTTCTTGGTCA Gene GeneID:507534|LOC507534:XM_002694750:148_cdna Constitutive 0 NULL GeneID:507534 18 GENE LOC507534 NULL similar to Uncharacterized protein KIAA0513 EMBV3_22762 CCGCCAGAGCCCATGGCCGAGCCGGCTCCGATAATGGACTTCCCAAACCAGAACTAATAT Variant GeneID:506408|ZNF786:XM_002687138:516_cdna 111^237 1 EMBV3_13733 GeneID:506408 4 GENE ZNF786 NULL zinc finger protein 786 EMBV3_24350 CCTACCCTGCCCTTTCCCCCGCCCCAGCCAACAGGAGAACCCCTGACTTGTGTAAATAAA Gene GeneID:617289|LOC617289:NM_001078073:96_cdna Constitutive 1 NULL GeneID:617289 5 GENE LOC617289 NULL hypothetical protein LOC617289 EMBV3_09075 CAGGGGGAACTGATGATAAAGGCTTGTGCCGCAGGAGGGAGTCAGACCTTGGTGCAAATT Gene GeneID:532393|NTF3:NM_001077988:35_cdna UTR3_Alt 1 NULL GeneID:532393 5 GENE NTF3 NT-3 neurotrophin 3 EMBV3_04748 GGGCCAAGATCACATCCTTGAACCTGATCGGGAGAGACGGGATCCATCCTATTTGAATTG Gene BVV0102_279536 + 0 NULL GK000005.2:72614195-73716088 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195527 1 XLOC_118071 NonCoding TCONS_00195527 XLOC_118071 NonCoding NonCoding - 5:72751652-72768703 - TSS145689 1047 2 TCONS_00195527_2 77 0.196752626552053 2 0.938709677419355 0.00116954363563423 0.00184269281027917 0.00114017829689847 0.0010231472890151 0.000455049921841483 6.49131506961009e-05 0.000479013895192696 0.000463235133607386 0.000406941106007979 0 0 6.8303594854866e-06 5.48097295708808e-05 0.000354933910560161 0.000215554208721383 0.000176581673851405 0 0.000287574950904981 0.000178074747135694 0.000913524280517966 0.000414622170794961 6.3788034952477e-05 0.000148957764812543 0.000512387457823214 0.00040366407389151 0.000141313179815863 0.00022384594600336 4.58700336157107e-05 0 6.89082146739696e-05 XM_005206780.1 LARGE PREDICTED: Bos taurus like-glycosyltransferase (LARGE), transcript 0.0 657 100.00 0.346704871060172 XM_005261833.1 LARGE PREDICTED: Homo sapiens like-glycosyltransferase (LARGE), 3e-102 376 85.54 0.316141356255969 0 noncoding 0 0 0 0 0.0547367005403915 0.672792222490203 0.0186722677193104 0.743584887879576 GGCGGCCGCCCCGCGTCTCTCCCCAGCGCCACCTCCCCGGACCCCAGTCCGAGGCAGACCCAGGCCCCATCCCATGCGGGGCGCCCCCGGCTCGGAAGAGTCCGGGGGGCAGGGAGCAGCTCCAGGCAGCAGTGCCCAAGGGAGAGGAAGAAGAAACGGTGCTCAGCTCGAGCGGCCCGGACCCTCCCCGCCGCCTTCCGAGGCGGGGGCTGCCCCGAAGTCTGCGCTTGGCACCGACGCTCGGACTCGGGCAGCGCCTGCTGGGACCCCGACCCGGAACCCCTGCGCCTCGTAGGCGGCGGCGCCGCCGCGCCACCCGGCTCTTCCGCGGTCTCCCTCTGCCCAGCGGCAGTCACGGCCAAGATGTGATGGAAGTCCTGGCTGTGAGCCGATTGGAAGGGCCAAGATCACATCCTTGAACCTGATCGGGAGAGACGGGATCCATCCTATTTGAATTGCTTGGAGAGAGGAGACAAGGTGGTTCTGAAGGAGAAGCTGAGCAAACAGAAAACCCCAACATGTTCAGTAGGAATATTAACCCGAAGACCTTGAAGATCAAATGAACTACAGGTGTCTTCTCTAAAACTCTTTCACTCTCCTGGGCATGCGTCTTCCCTTCCACGCATTACCAGCCAATACTTGTACTTGTTGTGACACCCATCTGCCCATCGACAAAATGACATTAGTGATACCGTCTGTTCCCTGCGTTGGTAATCTCAAGACTTTTAAGGCAGTGCCAGAAATCCCTGACTTAATGTATTTTGTGATTTTTTTTAAAGCCATTAGTTATGCAATTAAAAAAAAGAAATTAAAAATCATGGAACTCCATCTGTGTTAGTTTGCTAGGGCTGCCATAGCAAAGTACCAGGGACTGGGTGGCTTAAACAAAAGAATTTTGCTTTCTCACAGCTTAAGAGGCTATAAGTCCCCAGATCAAGTTGTCAGCCACGTTGTCTGTCCCGAGGCCCCTCGCCTTGGTTATGAGACAGCCATCTTCTCCCTGTGTCTTCACGTGGCGTTCCCTATGTGTATATCTGACACATAGTC TCONS_00195518 s 5' 86444 TCONS_00195518 s 5' 87127 EMBV3_01216 AGCCAGACAAGAGCTACATCCGGCAGCCAGGTAATAATTTCAAGATGCCGGGGCGTTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04740 ATGATATACATCTGGGAGAAGATCCGCAACGGGGACCTGGAGAAGACCATCAGGATGTGG Gene GeneID:528348|CCDC113:NM_001075910:315_cdna Constitutive 0 NULL GeneID:528348 18 GENE CCDC113 MGC127838 coiled-coil domain containing 113 EMBV3_08653 AGATCTGGGCTTAAACTCAAGCTGTAACACTCTGTGGCCCTGGGCAAAGGAATTAACTTC Gene GeneID:513622|MRPL51:NM_001101088:26_cdna UTR3_Alt 1 NULL GeneID:513622 5 GENE MRPL51 L51mt MRP-L51 mitochondrial ribosomal protein L51 EMBV3_32587 AAGACGCCTTCATCAACATCAAGTACATGGTCCCCACCTACGAGTCGTGCTTGCTGAACT Gene GeneID:100336821|LOC100336821:XM_002690381:4_cdna Constitutive 0 NULL GeneID:100336821 9 GENE LOC100336821 NULL PACRG protein-like EMBV3_00279 CCATGGAAGCTAAATTCTCCCGGCCCCATGCATTTCACATGGGACTCCAGATCTTAAGGA Gene GeneID:505318|OLFML3:NM_001075197:23_cdna Constitutive 0 NULL GeneID:505318 3 GENE OLFML3 MGC140634 olfactomedin-like 3 EMBV3_27323 AGCCCATAGGGTCACAAAGACTCGGACACGACTGAGCAACTGGGCTGCACTGAACACATG Gene BVT0101_067662 + 0 NULL GK000008.2:31872133-32053639 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00230633 1 XLOC_140123 NonCoding TCONS_00230633 XLOC_140123 NonCoding NonCoding - 8:31963779-31964437 - TSS172137 658 2 TCONS_00230633_1 59 0.758358662613982 1 0 0.0028508787084288 0.00608828594910337 0.00260288583954346 0.00319608971790732 0.00236094121179768 0.0018175230024608 0.00264997666500619 0.00120976096566678 0.00163978035719364 0 0 0 8.7212407736037e-06 7.1489240520064e-06 0 0 0 0 0.00592850401212815 0.0112900253800232 0.00174665890371568 0 0 0 0.0101326245725608 0.00500455677805093 0.00439450456680022 0 7.37784049977574e-06 1.82742519197735e-05 XM_005213039.1 KCNS3 PREDICTED: Bos taurus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), transcript 1e-117 426 87.79 0.515197568389058 0 noncoding GAGAGTCCCTTGGACTGCAAGGAGATCAGACCAGTCCATCCTAAAGGACATCAATCCTGAATATCCATTGGAAGGACTGATGCTGAAGCCGAAACTCCAATAATTTGGCCACCTGATGTGAAGAGCTGACTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTGGGAGGAGAAGGGGACAACAGAGGATAATATGGTTGAGTGGCATCACTGACTCAATGGGCATGAGTTTGAGTAAACTCGGGGAGTTGGTGGTGGACAGGGAAGCCTGGAGCGCTGCAGCCCATAGGGTCACAAAGACTCGGACACGACTGAGCAACTGAGCTGCACTGAACACATGTGTCATCTCTGTATTTTTAATTTCATTGGTAAGAAAATAATTGCACCTAACATTTATATCACACAATATCACAGTCAAACATCCAAGAACTTTATATATCATGTCTTATTTAATCCTTACAGGGTTAAATATTTTAAGGTAAATACTAGTATTATCCTTCTTTTTCATTAAGAAACTGAGGGGCAGGTAGGCCCAGTATTACAAACGTACAATGTGGTGTGCTTGGAATTCCTTCTGAAACAGCCTGAACTGAGTCATAGCTACAAGCCCTACATATAGATCTTTGTTAATCAAACTATGATTTTGTTTTCAC TCONS_00224888 . 3' 91497 TCONS_00224888 . 3' 92154 EMBV3_36389 ATTAACTTGCTTAAGGAATGTCACAAAAATTACATGGAAAAGAGGAACAAGAGCAGGGAG Variant GeneID:614078|C18H16ORF61:NM_001113175:62_cdna 244^315 3 EMBV3_09250 GeneID:614078 18 GENE C18H16ORF61 MGC137594 chromosome 16 open reading frame 61 ortholog EMBV3_10303 TGCGTCTGGAGTCAGATCCTGGGCTGGGCTCCGAGGAACAGTGACCTGGAACGGTGACAA Gene BVV0102_428340 + 0 NULL GK000002.2:79304397-79550828 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37481 CTGCGCCATCAGGAAATCGTTTGGCAGAAAGTGCTTTTCCCTCGTACCTCTGTTGCCCTT Gene GeneID:100141009|ASB18:XM_002686567:14_cdna Constitutive 0 NULL GeneID:100141009 3 GENE ASB18 NULL ankyrin repeat and SOCS box-containing 18 EMBV3_10702 AATCCCCCGAGGAGCCAGTTGCCAAAAAACGTCAGAAGAAGCTACCCCAGAAGGGAGTTT Gene GeneID:513045|MYBBP1A:XM_002695761:230_cdna Constitutive 0 NULL GeneID:513045 19 GENE MYBBP1A NULL MYB binding protein (P160) 1a EMBV3_39275 AGACATGCCAGCATCTTCTCCCAAAAACTCTTGACTCACATTGGGGTTGGGGTGACACTC Gene GeneID:781324|LOC781324:XM_002693293:101_cdna Constitutive 0 NULL GeneID:781324 15 GENE LOC781324 NULL similar to olfactory receptor, family 52, subfamily A, member 5 EMBV3_09223 CATCTGTTTTGGAACCATTTTCAAATAAAACTCCCCCTAACACCGCCTGACTGGAAGTCC Gene GeneID:537017|LOC537017:XM_002697563:372_cdna Constitutive 0 NULL GeneID:537017 23 GENE LOC537017 NULL similar to cytidine monophosphate-N-acetylneuraminic acid hydroxylase EMBV3_04989 CAGCCTCCCCAGAGACTGTTCTTGGTTTTGTACCTGACTGGCGGGTGTGCAACCAAATAA Gene GeneID:510274|PCYT2:NM_001035089:69_cdna Constitutive 1 NULL GeneID:510274 19 GENE PCYT2 NULL phosphate cytidylyltransferase 2, ethanolamine EMBV3_14249 GCACTCTCACACACTGCATCCCTGGGCATGAATGATGGACATTCCTCCTTTCAGTCATTG Gene BVV0102_004621 + 0 NULL GK000013.2:44230473-44945067 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18278 GATCTTTTCATGGTGACAGTGATTCCTTAGCATATTCCGATGTCTGCCTGCGTGATCGCC Gene GeneID:617475|LOC617475:XM_002699699:28_cdna Constitutive 0 NULL GeneID:617475 X GENE LOC617475 NULL similar to coagulation factor VIII-associated protein EMBV3_18316 TCAAATGCCCTCACTCCCACCCCTCATCCTAGCCAGTAAGAAATTCAGACTGTGGGTCTC Gene GeneID:613851|SLC30A7:NM_001083760:188_cdna Constitutive 0 NULL GeneID:613851 3 GENE SLC30A7 MGC138969 solute carrier family 30 (zinc transporter), member 7 EMBV3_18321 TGGACGCGCTCAGGTTCTTGGAGAAGAACGCACTGAGGAAGGCAGTCAGAAACCCAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34046 GTGGGTTTCATTGACTATATTGCCCATCCACTGTGGGAGACGTGGGCTGACCTGGTACAC Gene GeneID:524624|PDE4C:XM_002688538:142_cdna Constitutive 0 NULL GeneID:524624 7 GENE PDE4C NULL phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila) EMBV3_07441 GACGTCACCAAGAATGGTAGTAAGAGCAGAGATGGAGAAAGTTGACTAGGAGCCCAGTGA Gene BVV0102_026073 + 0 NULL GK000010.2:95712296-97457611 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24421 CCGTGCCGTCAACAGGACTGATGACCGCTGGTCCTGGCCTGGTTATCACGTCCCCCTCAG Variant GeneID:515007|ZNF384:XM_002687868:115_cdna 609^656 2 EMBV3_03089 GeneID:515007 5 GENE ZNF384 NMP4 NP zinc finger protein 384 EMBV3_35465 AGCATCAGCTCCTCCCTAAGTGGTTTGTGTGTCAGGATTTGCAGCGTTAATGTTTGCAGG Gene GeneID:281169|FNTA:NM_177498:11_cdna Constitutive 0 NULL GeneID:281169 27 GENE FNTA NULL farnesyltransferase, CAAX box, alpha EMBV3_20750 CGCAGCTGCAGCTGGACGAGCGCTCGCACCCGCCGGAGTGGCCGAGGCCGTGGTGGTCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04102 CTCGTGTGGACAAGGTGGATGAGGAGAGATACGACGTGGAGGCGAAAGTCACTAAGAACA Gene GeneID:511094|TNNI3:NM_001040517:157_cdna Constitutive 3 NULL GeneID:511094 18 GENE TNNI3 NULL troponin I type 3 (cardiac) EMBV3_19533 TAAGCTGTACTTGTCACCCCGAATTGAACAGGGTGTCGTGGAATATGATGCAGAAGGCTT Variant GeneID:614152|BRE:NM_001102274:216_cdna 764^934 3 EMBV3_26009 GeneID:614152 11 GENE BRE MGC165890 brain and reproductive organ-expressed (TNFRSF1A modulator) EMBV3_12569 GTGAGCAGGCGGCGATGACATGTACCACTTCAATTATTTTACCATCTATTTGGTAGTTCG Gene GeneID:533538|SGMS1:XM_002698368:152_cdna UTR3_Alt 4 NULL GeneID:533538 26 GENE SGMS1 NULL sphingomyelin synthase 1 EMBV3_18555 TAAACTTTCCACAGCACAAAGCCACTTAGTATTTAGACTACGTTTTTGCACACTTCAGTG Variant GeneID:514175|TMEM144:NM_001101989:60_cdna 846^964 3 EMBV3_13364 GeneID:514175 17 GENE TMEM144 MGC165857 transmembrane protein 144 EMBV3_09203 CTACGCCCGGACCGACGGGAAGGTTTTCCAGTTTCTTAACGCAAAATGTGAGTCGGCATT Gene GeneID:282048|RPL24:NM_174455:2_cdna Constitutive 0 NULL GeneID:282048 1 GENE RPL24 NULL ribosomal protein L24 EMBV3_23981 TGCGAAAGTGGATGTTTATCTGCATCGGCTGGGGTGTGCCTTTCCCCATCATTGTGGCCT Gene GeneID:281716|CRHR1:NM_174287:185_cdna Constitutive 0 NULL GeneID:281716 19 GENE CRHR1 CRFR1 corticotropin releasing hormone receptor 1 EMBV3_36787 CCTTTCAAATGGCATGACAAGGTGTGCAGTGGCCCCATCCAGCATGTGTGTGTCTCTATC Gene GeneID:537631|MAPK10:NM_001083728:25_cdna Constitutive 1 NULL GeneID:537631 6 GENE MAPK10 NULL mitogen-activated protein kinase 10 EMBV3_17354 TGAAGGGGTGAAGGCTCCCATCAGACTTTGTGACTGACTTGGCCTCCCAGGGAATGTTGT Gene BVV0101_004981 + 0 NULL GK000018.2:11208224-11243350 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26025 AAGAACTACAGGCAGTCCTTGCAGTAGCGAGAGGCTGTACTGTGGAAAACTGCAGCATTC Gene BVT0102_110688 + 0 NULL GK000006.2:99487576-99498195 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34522 AATGCACCCTGAGCTTTGCCAGAAGATGGTGTTGATTGCCTGGTTAGGTGGTTTTGGCAG Gene GeneID:782554|LOC782554:XM_002697476:128_cdna Constitutive 0 NULL GeneID:782554 23 GENE LOC782554 NULL similar to olfactory receptor 1368 EMBV3_03926 GATGGGGAACTTTGTGACCAACACACATCTCGGCTGCGTCAATGATCGGAAGGAACAGCT Gene GeneID:529246|TTLL9:NM_001035378:1174_cdna Constitutive 0 NULL GeneID:529246 13 GENE TTLL9 MGC127902 tubulin tyrosine ligase-like family, member 9 EMBV3_17370 AGGACAGCAATGGCTGTATCAACTATGAAGAGCTCGTCCGCATGGTGCTGAATGGCTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05317 CCCAAGTCGGCAGCTTACATCCCATTTGGCCAGGGCGATTTCTACTACGATGGTGCATTT Gene GeneID:529958|GLT6D1:NM_001075928:148_cdna Constitutive 0 NULL GeneID:529958 11 GENE GLT6D1 MGC133914 glycosyltransferase 6 domain containing 1 EMBV3_17704 TCTACGATGCGGAAAAGCAGAGGCCTCGAGGTGGAAGTTAAACGGGCCGAACCTCGGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34745 TGGGGCCAAATTTCCAGGACAAGCTGCCAAATGCCAGATGGGAACCCGGTGACAGTTTAT Gene GeneID:515475|TMEM140:NM_001105373:11_cdna Constitutive 0 NULL GeneID:515475 4 GENE TMEM140 MGC159778 transmembrane protein 140 EMBV3_00782 GCTGAGCCTGGAGAGCTGCTTTTTACCCGGTCCTCAATTATTACTTCCTTCTGAGGCTAC Gene BVT0101_018671 + 0 NULL GK000025.2:19201992-19228384 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02126 AGCAGGATCAACAGCTGGAAATGGTGTCTGGGAGCATCTCAGTTCTGAAACACATGTCCG Gene GeneID:525379|STX10:XM_002688744:83_cdna Constitutive 0 NULL GeneID:525379 7 GENE STX10 NULL syntaxin 10 EMBV3_17003 GGCATTTCTTGGGCCAGTAGTTTCCTGAGTTCCACGGTCATCAACATCTTCACCTTGAGC Gene GeneID:615810|LOC615810:XM_002693755:528_cdna Constitutive 0 NULL GeneID:615810 15 GENE LOC615810 NULL similar to olfactory receptor 1018 EMBV3_29556 CTGCAGTGCTGTACAAACGACTTTTTCCACCCCCATCTGCATGCTCCTACTACTTTTGAC Gene BVT0101_043743 - 1 EMBV3_02869 GK000002.2:15207509-15671108 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104525 1 XLOC_062402 Coding TCONS_00104525 XLOC_062402 NonCoding Coding - 2:15657770-15658918 - TSS77376 1148 1 TCONS_00104525_3 70 1 0 0.00086578215057881 0.000489043062171495 0.00044194349238613 0.000545900210103341 0.000330800983973617 0.000141188736224009 5.2355496426337e-05 0.00222056099774545 0.000460486490368566 0 0.000105661782817208 0 1.24968861265663e-05 0 0 0.000806691458079393 0.000444582330144909 0.000611093311915376 0.000401168706581159 0.000682809395765434 1.58661430511759e-05 0.000991891642472794 0.00012731384694046 0.00023616530295726 0.000649468951850863 0.000518370409441536 0.000188086679215695 3.34675313179246e-05 4.06173028541198e-05 5.237152919545e-06 XR_230266.1 LOC101905876 PREDICTED: Bos taurus uncharacterized LOC101905876 (LOC101905876), 0.0 2071 100.00 0.999128919860627 0 noncoding GTGGAAGGGTCTGCCAGAACCAGAGGCTAAGCACACAGCAGTGTAAAACAAATTCTTTATTCCAGCTTCCAGAATGCATCCTCTTCAGCCTTTCCTGTTCATTGGACTAAAGCTGTTAAGCAATGGTGTCAAGAACCGTCATCCACTGGTTGAAGCTCAGTACAAAACCAGGAAGCAGGCGGGTTTAGATCCAGTAGGAACAACTTGACTCAGATCTTCGCACTTTCACTAAGGAGGGTCGGGGGTGAGGAGACAACATTTACATTTGTACTGAAGCTGATCTGATGTGATTGTGACAGTTTTCCAGTCAGTATTTGTTTATCTTAATTTAGTCGCGTGTTAAAAATGTGAGGGTCAAATTTACTTCCTTTCAAGGCCACTTGGCGTACACGTCTTGTAGTCTTTGGAAGGGATGGCAAGGAAACAGCCATGCTTTAATGATGGGATTAGATGTTGATGAAAGCTAGGTGTAATAGTAGAAACATTTTATTGTATATTTTTATTCCAAAGTAAGTGCAGTGTTATTATATTTAGATAAATGTTCAGTGATAAGCCAGAAATCTTACACATACATTGCTGAAGACATTTTCCCTCTGGATTTAATAAAATTCTGGTACACAGAGGTACAAAATGTAATTCATAAATGTAATGAAAACCCTAGAAAACGCTTCCCGCATGCTTTCCTTCCCTCCCCTCCCCTCCTGTCCCTTTCCTCCTCTTCTCCAGCCCACTCTCCAGTCTTGCTTGCCTTCATTGCTGGGGGAAAAAAAAAAAGAGCAGGTGAGCACATAATTAGGTTGTCACTTTTAAACTCTGGATTAGTGGGACATCCTGGAAGACCTCCCTCAACTGCAGTGCTGAACAAACGACTTTTTCCACCCCCATCTGCATGCTCCTACTACTTTTGACTAGATGTCTTGAGAATCTGCCAATATTTTTAATTGATCAAGTGAAAAATACACAGGAAGTATGCCTGTTTTTTAATTTGTTTGTATATTTTCTTGATGCGTTGCATAAAGACCCAAAGGTGCTTTGGCTTCTGTCTGTCCTCACTGGAACTGTGGTTACTGTGGGGTGTGTGGTACTCCGTAGCACACCATAAATCTCCACTAGATGTCAGCGTGTCACCAAATGAAACCAGCACTCTC TCONS_00104524 s 5' 0 TCONS_00104524 s 5' 0 EMBV3_42649 AGAATGTGTCTCTGAGTTCTGTGAGCTGCCCTAGCAAATTAACAGATGCCAAGGAGGGCC Gene BVT0102_268108 + 0 NULL GK000008.2:105147136-105203359 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05433 ATGCAGTTCAAAGGCTGTTAGACCAGCTTCCGAGAGCCAATGTTCTTCTCCTAAGGTATC Gene GeneID:515501|ARHGAP20:XM_002692973:34_cdna UTR3_Alt 2 NULL GeneID:515501 15 GENE ARHGAP20 NULL Rho GTPase activating protein 20 EMBV3_12604 CCCGAGAACAGTCTGAGCTACTGGAACAACGCCATCACCATGGACTACTTCAGCAAGCAT Gene GeneID:511034|TMEM108:NM_001101939:25_cdna Constitutive 0 NULL GeneID:511034 1 GENE TMEM108 MGC166037 transmembrane protein 108 EMBV3_21582 AGGGAGAGAGGGCTGCTGGAGAAGCACAGGCTGCTATATTTGTAACTGGTTGATTCACAG Gene BVT0102_095224 + 0 NULL GK000007.2:41602838-41643589 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212987 TCONS_00212986 1 XLOC_130297 Coding TCONS_00212987 XLOC_130297 NonCoding Coding - 7:41626371-41639297 - TSS159650 1372 2 TCONS_00212987_1 66 0.0619533527696793 2 0.894003868471954 0.00105180849903823 0.000113257938356378 2.56723233444308e-07 0.000423626695204592 0.000395961108627826 0.000341387136665013 0.000267393687587795 9.45215218346412e-09 0.000130048848666535 1.47012684232709e-61 2.61957885655451e-05 1.26236687834908e-13 1.8723600398088e-09 3.02199292243595e-05 0.000945906411441717 5.26422158729793e-120 4.56767913950988e-53 3.06069524709188e-23 0.00101843072066507 0.00188181854274301 0.000680651799176075 7.90275909574476e-212 5.33318403192394e-31 8.78411144106338e-49 0.000515873629200832 0.00076439939058202 0.00020691354251396 4.35166461424225e-66 3.89605672422215e-21 5.60434407733916e-84 0 noncoding AGTGGGGCAAAAGAGTTTTACCACCACCACCTGGCCAATTGCTGTCTCCCTACATAGTCTCTCATGGAGTCTTGTAGAAGATGCAGGGAGAGAGGGCTGCTGGAGAAGCACAGGCTGCTATATTTGTAACTGGTTGATCCACAGTGGCTCAGGGTCCCTCTGGATCAAAATTTCCAGAAGCCCCATCCACTTCCACAGTCTGGAGGAGCTGCTGAGCCTCAAGTAAAATGTGAGTGGCCACAACTAGGATGGGGCAGGATGCTTCTCTCAAGAGCAGAAGCAGAATTCCTTGTGAAAATGGTTCAAGTTGGAGATAGGATGTGATAGGATTCAGTCCAAGGGTCCACACAGCCAAAAAGCACCTGAAATCTCCAGGGTGGTGGGAAGATGGCAAAACAGTGGCCAGGTCCTAGGGTTCTCCCAGGTCTCTTGCTGACTGCTCTTTTCCAAAGGCCCCCTCCAGGGAACGTCTAGAGAACATCCAGGGACACAGCAGCAGTGACATACACAGGAATGCCAGCAATAATGTGGTTCTGGAACTTTGTCTACAAAATCTTCTCCAAATTGTTCCTGGGAAAGAAGGTGATGGTAAGAGTTGCTCACCCTGATGTGAACTGTGGCAACCAGTATAGAGGGGTCTGTTGGCTGGAGGAGGAGCCCCCCAAGCCTCATCAGTGTTGGGAGTGTCCTGAGTCTTGGCCCATGTGGGACTGAGCTTCAGACCAAGACTTTGGGAGCAGGCATGGTTAGAAGATACAAAGCTGCCTGGAGCCAGGGTGGAGCTACCAGTAGAAGAACCAGGGAAGGAAGCAAGCAGAGTGATGGCAGCGTGGTGAAGGCTGCAAAAGTAGAACCAGAGAGAGACGCTCATGCTGGAGTAAATCTGGGAGAGCACCGGCATTACTGTTTGCAATTCTTTTAAATTATTTTGAGAGATACTTTTTTAACCTTTAAGAATCAGTGTAGTTACGTTTATAATACTTTCTGTATCAGTTTTTAGGTGTTAGAAACTGGCAAGAAGCCTGAGAGGAGGCTTAATTCTGGAAAACATATCTTTTACAACAGTGTCAATGTGAAAAACATTTTTACACGTGAATTTTGGCTCTCAGGCACTGATAAACTGAGGCATTTGAGTGTATGATATGGCCGCCATCTTCAAATGAGAAAGCAAGCACTTGCTGTCCTTTGAAATACCTGCTGCATGTATGCTGCTATGTGTGCATGAGTTAACCTGTTTTTATGGTTGTATTTTTTGTGTTGAATATCTATTTTGAATCTGCATAATTATACTTTGATTATTCATAAGTTCTCACTTCATGTAACAAATGCATGTTGACAATAAACTGTAAATAAAAGAAATGTATGAAATAAG TCONS_00216681 r 3' 4293 TCONS_00216681 r 3' 17218 EMBV3_34153 CATCAATGAGGGACAGCAGGAGGGAGAGAAAAAACCTTTGCCCCAAGTTTCTGAGCAGTG Gene GeneID:282401|ADAMTS2:NM_174631:7_cdna Constitutive 0 NULL GeneID:282401 7 GENE ADAMTS2 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 2 EMBV3_11887 AAGAGATGAAAACCCGTCCTTTCCCATAAAAGGCACTGTGGAATTTCTCCACTCCGGGTG Gene GeneID:497022|CD2:NM_001011676:14_cdna Constitutive 0 NULL GeneID:497022 3 GENE CD2 MGC140284 CD2 molecule EMBV3_11657 CTAAGCATATTTGTTCAGGGAAATCCATGCCTCATGCTGCTCTCCAGTCTGCTCTGGGTG Gene GeneID:786690|BVD1.15:XM_002690613:2_cdna Constitutive 0 NULL GeneID:786690 10 GENE BVD1.15 NULL similar to TRD@ protein EMBV3_09116 GATGAAAGATGAGTCCAACGGCGCTCGCTCTCTAAGATTGAAAGGGAATGTGAGTGCAGG Gene BVT0102_277512 + 0 NULL GK000009.2:88633705-88955909 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08547 TGCACATCTGAGCAAAAACAGCATAGGACCATCTCTCAGCCCACCCTACCCACATCTACA Gene GeneID:516026|GPRC5A:NM_001034515:92_cdna Constitutive 0 NULL GeneID:516026 5 GENE GPRC5A MGC127231 G protein-coupled receptor, family C, group 5, member A EMBV3_21843 GGAGCTGAAGCTGCTGCCTTAAAGCTAAACCTGCTGCCTTAAACTTTGCTACCTCCCTCC Gene BVV0101_035941 + 0 NULL GK000010.2:70034780-70069548 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014525 TCONS_00014527 TCONS_00014526 TCONS_00014530 TCONS_00014529 1 XLOC_008321 Coding TCONS_00014525 XLOC_008321 Coding Coding NAA30 10:70011073-70038368 = TSS10466 9163 1 TCONS_00014525_2 359 0.0576230492196879 5 0.66446838132923 0.000578361021833918 5.74879374976321e-05 0.000287075704219329 0.000193078687480326 3.06335433007341e-05 0.000134008732666345 5.39046968219456e-05 0.000296735701254665 0.00017601633943063 1.60185645629451e-35 1.01816017463179e-69 4.24224422714243e-15 6.55918773842138e-05 6.14190033434421e-05 1.52894371252648e-07 3.48206032903761e-18 2.3831166071158e-13 4.17513083423116e-18 0.000186197633574563 0.00110081108640437 0.000244236187395344 1.10432885324381e-45 7.77104185028487e-87 2.41736856198227e-37 0.00066687246299622 0.000424959149242655 0.000464326135962038 1.00208929095516e-79 7.95318361709056e-34 9.18270070365925e-16 NM_001206037.1 NAA30 Bos taurus N(alpha)-acetyltransferase 30, NatC catalytic subunit (NAA30), mRNA. 0.0 8028 99.98 0.4860853432282 NM_001011713.2 NAA30 Homo sapiens N(alpha)-acetyltransferase 30, NatC catalytic subunit (NAA30), mRNA. 0.0 5438 86.79 0.491542071374004 TCONS_00014525_2 sp|Q147X3|NAA30_HUMAN NAA30_HUMAN N-alpha-acetyltransferase 30; 0.0 538 92.01 0.997214484679666 5 coding 0 0 0 0 0.672733705603492 0.0258951410064568 0.0230820294644298 0.779966387276584 GCTCTACATTAAGCCTAAAAAACTTAACTTGCTCCGTGTGCTGGTGCGTTACACTACCTGCGCTCCTCTTAGAACAGACGGACTGAACATCGCGGCTGTGGACCAGAGCCGAAAGAGCAGAGCCTCGCGCTCTGGCGCGGAGGGCAGTTCTTTTCCCTTTGCCTCCGCACTGGCAGATGACTTGGCAGAGGGGGCAGAGCGGGGCGGGGGCAGGTTCAGGACACCTTTTGGCCGGTGCTTCTCACCTATCACAATTCGGTTCACAAGTTTAGGAATGTGCTTCTTAGCCATTGTCATTCTCTTTCAACATCTCTAATTTTCCCCAGGTGTGTTTACAGCTGCCAAACACCTGTTAATCCCATTTACTTCCAGTCTTCCTGGGCGGGGTGAAAGGGATAAAGAACGAAGGAGAGAGGAAAAGGACTACCTGTCAACTTTCTCTTGCCTCAAAGAGGCAAAGACTAAATTCACGTTGCAAACGAACCAGTTTTCCTCAGTCATTCTCATAATTTTCACAGTTCAAAGTTTTAAACTTCCTCTCCTTTTCGGGGATTTTTCTCTCCTGATTGCTCCATTTTTAAGGGACACGGGTAACCCTCCCCCTACCCCACGTCAGAGCAAAGGTTAAACGTAGTACAGCTGAGGAAAAGCATTTTTAGAAGATTGGTCCAAGGGCCGGGGAGCAGGCCCAGAGCGGGTGAGCTTTGCGGCAGCTTCGTGGGAGCGCCAGTCTGGCCCATCCTTCCCGGGCTCTGCAAGGTCCGCGGGCCGAGCAGCCCGCAAGGCCGAAGATGGTGGGTTAAGGGCTGGTGACTCCCAAGCCCTCTGCAACTTCCCTGCCCTACAGCCCCACCCACTAGCACGCAGCCGCCACCGGGCCTCGGGAGACACCTTCGCCCCTCCCCGCCACAGGTCACCTCCCTCCACGCCCCTTTCCCTCGGCCCGGCAGCCGGCAGGCAGGGAAGTGTCGTAAAGCCAGGCCCAGGAAACTTTACCCGGGGTAACAGCCGAGGCGCTTTACGGCGACGGCGGCTGAGTGTGAGCCTTGGCGGCGGCGGAGGCAGCCGCGGCGGCGAGGGAGGCGGCGGCGGCTGAGGAGGAAGAGGAGTGGCGGCAGTGGCGGCGGGGACCTGTGCGGGGATGGCGGAGGTACCGCCTGGGCCTAGCAGCCTCCTCCCACCACCAGCACCTTCGGCCTCGGCCGCGGCCGAGCCCCGCTGTCCCTTCTCGGCGGGGGCCGCCCTCGCCTGCTGCAGCGAGGACGAGGAGGACGACGAGGAGCACGAAGGCGGCGGCTGCGGCGGGAGCCCGGCGGGCGGCGAGGCGGCGGCCAAGGGGCATCCGTGCCTCCGCTGCCCTCAGCCGCCGCAGGAGCAGCTGCAGCTCAACGGATTGATCAACCCCGAACTGCGGCACCTCCGGGCGGCCGCCTCCCTCAAGAGCAAGGTTTTGAGCTCGGCCGAGGCGGCCACGATCGCGGCCACCCCCGACGGGGGCCCCAGAGCGACTGCAACAAAAGGAGCCGGGGTACACTCGGGCGAGAGCCCCCCTCACTGCCTCCCCAGTAATGCAAGAACTGCGCTCTCCAGCCCGGCAGAGGCAGCGGCGGCGAGCGATCCCGCGGCGGCCCGCAATGGACTGGCGGAGGGCACGGAGCAGGAGGAGGAGGAAGACGAGCAGGTGCGGCTGCTGGCTTCATCCCTGACCGCAGGCTGCAGTTTAAGGAGCCCCTCAGGCCGGGAGGTTGAGCCGGGGGAGGATCGGACGATACGTTATGTCCGATATGAATCCGAGCTACAAATGCCCGATATCATGAGACTGATCACCAAAGATCTGTCTGAACCCTACTCCATATATACCTATAGATATTTTATCCACAACTGGCCACAGCTGTGCTTCTTGGCCATGGTAGGGGAGGAGTGTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCATGTTAGCCGTGGATTCCAAATACAGGAGAAATGGCATTGGTACTAACTTGGTTAAGAAAGCTATATATGCTATGGTTGAAGGAGACTGTGATGAGGTTGTTTTGGAAACAGAAATAACGAATAAGTCTGCTTTGAAACTTTATGAAAATCTTGGTTTTGTTCGAGATAAGAGGCTGTTCAGATACTATTTAAATGGAGTTGATGCACTGCGACTTAAATTGTGGCTGCGTTGAGAAACTGACATCAAGGAACAACTTTCCAACCATGCAGAATCGACCTTTGCATGCAATGCAATTTGTACAGAATTGCTTTGCAGGTGGAGTTAGTGATTTCCATGCAGCTCTTATCTGTCAGTGTCTCATTTGAGTGTCGCACAATATTTGTTGCACTTTGGCATGGCGCATTTCTTCTGAATTAAAAGAGATTGTTTTAAACTTAAAGAGTTCTTTTGGTACCAACAAGATGTGCCAGTTGATAGCCAAGATTTGTTTGTTCATTTGGAAAGTCTGCTGACATTATTTACACAGTGATAATTTTATCGCAGAACCAGGATGTGGAACATGATTTTTGTTTCTTAAAAAAAGCCAATGTAGATTGTAAAAATCTCTGAATATACTAACATTTCACATGAAACCTGCCATAGTTTTTCTGAGGGGGTGGGGGAAAAGCTTCAATTTTAGGTTTTATTTTTTCAATATTAAATTTTCCATTCTTGAATATTGGTACCTCAGTGATTAGTGAATTAAAAAATTGTTACGTAGGGTTGGGTGTGTCTTACAATGAGTAAAGATAACCAATTGCGTCTGCCAGTGCCTGTGTAGATAAGTATATTTGTCTTCATCTCTATAGGTTTTGAATGCATGCTGTCTTTTCCTTTTCTTTAAGGCCTTTGCAAGCAAACTTGTTTTTATTTAAATTCTAAATTTGATAATAAATTATTTCAGATTTTTATAATTTGGATACTTTTTCCAGGTGAGTGACAGAGTGGTTTACTGTAGAAGTCCCTTCTTATCTTACAAGTTAAATCTACTTGGAATATCTTTAAGAAATGACTCAAAAGGGATGAGAAAAGTTGATGAAGCCGGGAATTGCTGGGTTTTAGATGCACTTTTTTTGAGAGTGAGGGAATTTTTGGAAAAGAATAGAAAAATTAATGTAAATTGGTATGATTTTATTTAATCAAAATTATTGCTCAGCTGTGAGGAACAGCTTTTACAAAGTAGTTGGAACTTTTTTCCCACTCGGTTTGAATTCACATTGCTTCCACTTTAAATGCTTTGCTTTTGGTTCTTGGTGTTGAAAATAAATTTCGAGGTGCACTGTATCTGTTTTAAACTGATTTTATTTTCTTTTCATTTATTTGTGCAAATTCTTGGGGGAACTTTGCTTAGTTCCCAGAAAACAAAAGGGAGACATGGAAATTTTTTTTTTTGGAATGAGTTCTATGGGTTTTCTTAATAGCCATCACCATGTTCATTAGTTATATTTTGTTTCAGCCAATCTGTGCAGTGTAATAAATTTTAAAGTTGATTGCTTTCAGTTGAGTTAAGAGACCTGTGATGGATAATTTATTTGACTGGAAAACCTAGGTACCCATTTAAAAAAAAAGATTCATTCTCTGTGAAAAATGTTTTGTAGGAATCTATTGTTTTTTCATTAATTTGCATATACTTTTCTTCTGCTCTAGAATTTGGTTTGAATTTTATTTTATGGCTGTAATTACTGTATTTTTAAAAAACCCTACCTCCATTAACAGTTGGTAAAAGCCCCCTTTCAGGAAAGTTTGTTGCCTTTTTTTTTTTTTTTAAAGGAAAGCTGCTCCTTGCTCAGTGTAGTGTCTTGAAAGTGAACATGGTAACAAGTACTTTTAAAATAAAGATTCATAAATTTGGTGAAAATAAAATCTTCCTGTTGATGGGATCATTTATATTAATAGTTCCTTATTTTTAAAGAAAACCTTTTTCTTTCCATCTTATATTGCTCTTGAAAGTTTAATGGGCAGAATACTTACATTAAAAATATGAAGACCACACAATACTCAGCTTTCAGGGTGACCTTTTTGAGTATGTTTTTGCTCAAACTTCATTTGGACTCTAGCACTTAGAGGAATATCAATTATAATGATGCTTCTGTTATTCTTGATATTGAGGGAATTGAACGAAGTGTATAGTTAGTACTTTCACTGTCAAATTTTATCTTACCACCTTACGTCTGACTTGCTGGTTAATGGGTAATGATTGTTGATGAACATACATTTGCTTGACTCACTAATAAGAACAGTTCTAAAGTAATACTTGCTTGGTTTTTAGCTCAGCCATTAATTTTTTGGCAGGTTGTCAGTGAAACCATCACTACTGACCTTTTCACCCAGAATTGGCCAATTTTGCTGAATTGACTGGGTGTTTTAATTGGGTATTTTAAACATGAACTTAGCCATGTGACTGAAAAGTCAAATGGTTGTTGTATTGTTTAGCTGGTATATGTTGAATATCATTGTCTACCTTGTATCTTTAATTGGCTGTGCAAAAATTGTTTACTTAAGTGCACTGAAATTTTCCTCTAGCTGATAACCCAGCACCAAAATTAAGTCTCAAAGTATCATCAAACGAATTTTTTATATTGGACGTTCATCTTTCTTATATAATCGTGAAACAGTTCCATTTGAAATTGATAGAGTGAGTTCACTTGGCTAAAACTGAGCAAAATTGGTGCAACTTTCTTTTAATGGGGTGCTGCCTCTTTAAGACTGACTGTACTATCCACTGACACTGGTTTGGCAGTTGGTACTGCTGAACATTTTTATACATGCTACCATGAAGCTATATATGTTAGTATTGAAGAAGCTAACGGGTATACTACCATTTTTGATGTGTGGGCTGATTATAATTTCCCTTACATGAGGATGAAACTACTCTAGAGAAGTCCACAGATCATAAACCAGATAGTAGTTTTGAATCTGAAGCCAGCAAAATTAAAAAAGTTACTATTAAAATATTGGTTTTAATATTTTCTGCCTCTTCCCCAAAGTACCCTCCCCATTTGCTTGACAAATCTGTGTAAAGTTTGTTTGTCACATGTTTTAGCTTTACCTTGCCCTGTGTTATGGTATTGGCTGACATGTATAAGACTGGATGTGTATATTTATTATGGTGTCTAAAAATCATGAAGTTCATCACTTTCCAGGAGCATAGATAAAAGCAAATTGGTAGTGCATCAGTTACTTTTCAGTGCACCACGACATCACTAAAATGAGTGCTATATTGTTACAGGGCTTTCAGGTTTGTAAAAACATAACCATAAATTATACTGACGTCAGATATGAGTTGAGTATCTATAAAGTATCACGTGTATCTCAAAATATTGGACTGCTGTTTGATGACTGGATATTGCTGCATAATTTTCTTCTATTGTCCCATATCCTTTTGGAGAGAGAGATTTAATGGGATTTGAAATGTGCAAGCTGTCTCAATAAGATGCAGTCAAATAAAGTATGGTTAAGTTGTGTTTGCATTTTTCTTTTAGATACAGCTGTGTGCATTTTATGTTTGAGTTGTTTTACCTACTAAGAAGTGAAAAAAAAAAAAAAGGCAAATCTGTTCTGTTCCCCACTTACTGCCTTGCATCTAAGAGTTATTTGGAAGAAGTTATATACAATTGTTATCTCTCTCACTTTGTATTCTGACAAAGTAAATGTGAAAATAACAACATGAACTTGATTTTCCTAACAGTATTCAAAGTTAGCTCATATACCAGCTATCAGTACAAATGAGCATTTTTGCATGCATTAAACCAAAACTTACTTTTCTGTCCTTATTCTGTAGAAGTTTATTTGTAAGACAGTTTTTATTTTAATTATTTTTTGTTGATAACCTAGGTAATGTCCCCTCACCCTCAAGACCAAAGTAAAATAGAGCAATATCTAAAGGGCTTTTGGTCTCGTTCTTGTGAGAAACTTTAAATGACAGTTATGTATTCTTTCTTATTTCAAAATTTATGGATATTAGTGGGAGATCTGTTATAAATATGGCTAAATTACTTTCATCATGCATGTCAAATTTTTACTTTGTTCTTTTACAGTCATGTAGTGAAAATAGAATGTGAGTTCATATTTTACTTGGCCCTATATGGAACTCTTAAGTACTTCATAAATTGTCTAAATAAGGACAGGAAAGTTGATATCATTCTTTCACACATATAAACAGAGATCAATAATAACCTGTAGCCTAAAGATATGATACTTTTAAACAGCTTTTTAAAAATGAGTTTGAAAATTTCATGAGTATTGCACGATGCACTTTCTTCAGATCAGAGCTGTCCCCATGGCACTTTTTATGATAGACATGTTATTTGTGCTCTCCACTATGGTAGCCACTAGTCACGAAGCTACTGAGCCCCTGAAGAAAGGCTAGTATGATTGAATAACTGAATTTTTAATTGAAATTTACATAGCTACATGTGACTAGTGGCTTCTGCATTGGATAGCATAGCTTTAGGTAATATTTAGACAGTAATAACTGGGGAAAGCAGTTTTTGAAAAGGATTTTTTCAGACTAGCTTATTGAAGAATGAAATAAAAGGATCATGATTAAAAATTGCCTCTGAGCAATGTACGCTATACAAGAGTAAAGCTACAGTATTTATGTTGACAATATTTCATTAAAATAGTGTCTGTCATAGCGCCTTTTCATAGTGCTCTTGCTATGAATTAGCCCTTCTGAGAAAAGCAGCCCTTTCAGTTTTTTCCATTTGGTAGTTGTCTGGGTTGCAAAGGTGCACAGATTCAAGTGCCAAAAATTGGTTTCTGATAAGACTGTCATATCTTTTTAGCTTTAAAACATTTTACAACATTAAGCTTAACAATCTCTCATTTTAGGTGAATTCGAGATAATTTCACCTCTATTTGAGATTAGTCATTGCTTGTTTTATGAGTGGTCAAACTGAAACATGGAGGTATATCATTTTTAATCCATTTTAAAAATGCTAGATTATGTTGATACAAGAGCAAGTGTTTTTGTTTCTGAGAGAACCAGATTCATTTTGCTGTGTTCTCTGTTCACGGCATGTCACCCTTGACTCTAGCTGGACATCTAGTAAGTGTAATTCATCAAGAGAATAGGAGTGGAGATGGGAAATACCCGGCCCCAGGGAGTGCCAGGCTTGCTATGACACTGTTAACACTGCTGGAGAAAGCTCAAGGCACATGTTCTTTTGATAGTAATCAGTGTTAATCTTCATGTGAAAAAGATTTAGGAATAATAAAGATCACCAAAGTGCCAAAATCGACCTTATACTACTTAAAAAATGTAAACAACGCAGGAGTTGAAATGTAAGGTTTTTATAATACTAAGAAGCCTATTTTTAGTTGATTAATTTTCATGACTACCTCTTTGCTGTATGACTATATCTCAATTTTTTAATACCTCAATTTCCTGAGACTCTGTATGTACGCTTTTGTAAATAATTTACCATATGCTAGAGGAAAGGACCTGACTTAAATTGTATGAAGACATTTGTTACTGGATTTGTTACACAGTAAATTGATTTGAAATTTCTTTAAAACAGCCTTTTCTGCCCCCCTTGATTGAGGTTTTCTTTTTTGTTTTTGCTTTTGTTTTTGTTTTTTTTTTCAGTAAACATATTCTTAGTGAGATTTGTGTTCCAGAAAGTGTGTATCCTCATTTGTTCTGCAAAGATTTGTATGTCTCCTGTGTTTTCCTTTCATGCCAAAGAAATTCACTCTTTTAAAAAGTCAGCAGGTTGTACTAACTGAAAAAAATTTTTTGCCCCTTAAATAGGCATTAAGTTTTACTTCCTGAGACTTAAATATTTTCCAAAGGAAAATATATTCAATTTTTTAGTTAAAGCCATTAGTAAAAATTTGTAAAAATGTGTTTTTAGTAATTCACTAGTTCCATAGGAAATAATATTGGCAATTTTAAGGAACTGTGCTGCTTTAAAATCCACTTTTGTTTGAAACTTTTCAAAACTGATATATAAAGTGATTACTAAATTTCATGTACATTTGTGAACTGTTCAGGGTTCAACGCCCTAACATATAGGGGATAGATTACTGACGTCTGTAACACCAGATAACCTGTGATTGTATATGTTTATTGATCATTTTAAAGGAGCTGAAGCTGCTGCCTTAAAGCTAAACCTGCTGCCTTAAACTTTGCTACCTCCCTCCAATCGTGGCTGTAAACAGTGACTGAAGAGTCAGCTAGCCTTATACTTGATTTTATTGTGAATGCTAATAAAATTTATAAGTCCACCAAGTTTTGACTTAACTAGGAAAATGTAGATTGATTTCAACTGTGTCTTTGGCCAAGTCTACTTGATAGCTTATGATAATATGAAATGAAGTACACCAGTATGGATGTGAGCATTGTGTTTGAGTTATTGTGAGAATAATTTTTCCTTAATATTTAGAACTGATAATGAGCATTCAAGGTGTCTGTTTGCATCCTGATGATACTGAGCAAATTTCTTAATCTCTCTGAGCCTTTAGTGGTAACTGCTTGATAAACTTAGTATGAAGAATAAATGAGATAATTTATGTAAATTCACTATAATGGTACCTAGTAGCCTGCTGTGCTGTGCTTAGTCTCTCAGTCACGTCTGACTCTCTGCAACTCCATGGAATGGGTTGCCATGCCGTCCAGGGGATCTTCCTGACCCAGGGGTCAAACCCAGGTCTCACACATTGCAGGCAGATTCTTTATTGTCTGAGCCACCAGGGGATCCCAATACTGGAGTGGGTAGCCTATCCCTTCTCCACGGAATTTTCCCGACCCAGGAATCAAACTGGGGTCTCCTGCATTGCCAGCGGATTCTTTACTGGCCAAGCTACCAGGGAAGCCCACTAGTAGCCTAATACAGGGTAAATAAAACATGATAGCTATTATTAATATATATACTATAGTATATAGTAATTTTGTGTTGTGGTATTGGATTTTGTAGCACCTTTTAAATGGTAAAGGTCATCTAAATATTATATTAGGTCTGATGAGAGTAGCCCAAACCATAACAAGTGAAGAGAAAAACTTCTTTATTGTGGAGAATATTAAAATAGACTGAAGAGTGTAATGATCTCTCCATGCACTTATCAACTGTGCCCAAAGCCCATTGCCAATCTGGTTCTATCCATTCCCCTTTCCCCTTCTCATAGTTCCCCC EMBV3_29265 GGGACAGATGGCTGCGTTCGTGTCTGGAAGGTTTGGGCAGGTTCCAGACCAGCCTGCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42004 TTGTTTCCTACTAGAGGATTATGGAGGTAGAAGGACTGAAGATGAGCATGACCCCATGGG Gene BVT0102_152295 - 1 EMBV3_29486 GK000027.2:34353370-34367776 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00884 CTACTTTCTGCTTGTGCTTTCACCTAAACCTCTGACTTTACGCGGGGCTCTCCCCCACTA Gene BVV0102_136317 + 1 EMBV3_24986 GK000014.2:40531577-40936274 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134876 TCONS_00134877 TCONS_00134878 1 XLOC_081568 NonCoding TCONS_00134877 XLOC_081568 NonCoding NonCoding - 23:31103865-31107831 - TSS100460 3966 2 TCONS_00134877_3 104 0.301059001512859 1 0 0 0 3.3614476544525e-15 9.5941761560716e-22 6.09613449321502e-21 1.28694291605463e-20 3.84082746709463e-15 8.6996932475596e-20 2.16167140483215e-21 1.61594493139293e-05 2.21816493060411e-05 0.000112516702463313 3.44719630312864e-10 4.61338084777687e-05 0.000128768902561206 3.60204353483715e-10 4.20945687677168e-10 6.69577326738751e-13 0 2.82314950024578e-10 3.71162993549208e-16 0.000354642936957241 1.72951378125587e-10 0.000319391619788706 4.03526912369282e-22 1.92345785152099e-19 3.55589647416915e-21 1.60434669867432e-05 0.000153186116867957 0.00033091089253408 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 5e-164 583 94.95 0.0935451336359052 0 noncoding 1 1 1 1 -0.595416926795943 0.174418025970049 -0.0383345061947562 0.593236167095668 CTAAAAACACCACAGCGGAAAAAAAGGAAAAGCACTTGTGTCCATAAATAGGGTGCTTTCTAAATAGGGTGAGAGAAAGTCCCTGAGGGAAAGAAAGGAAGGAGAGGTCCAACTCACACAAGCCTGAGACATAAGCACCCTGCATTCTCTGTAGAGCAGCATTTTCTTTCCTTCAACTTAACTGAGCTCATTTCCTTGAGACTGAGAAAATCCCTAGCTCTCTTCCCAGATCAAATTAATACTGGGAATTCTTCAGCAAACCTGCCAGTAATTAGGATGGCTTTGGGTGATCTAGAAGGAATGAGACAAAGAAAATCTCAGAAAATTAAGGACATCATTTTGGCTCTGCTGAGAAGCTTTTTATGGACAGCTGCTGTTATATGAACTCTTTGTTTTCATTTTCTATCCATCCTTTCCTCCCCACAGCCCTACCTGATAATGTCCTCCACATACAATAAAGTCATGTGTTGGCCACATACTGTTGGGAGACTGCTTCCATAAAGCATTGGATTGGAATCCCTGCATATTAATTCATTCATTGTGGGGCCAAACAATATTCATAAAGAACTTAACACGGAGCCCTGGTGATAAACTATTGAACAAGATAGTTATCTCCTCTTGGAACACAGTGAGGGCAGGGAGGGACGAAGGGAGGAGACTGACATTAATTTAGAATAACTCCAGTAACTAATTAATCATAAGAAACTGATTAGGGACATTGATGGAAAAGCAAAAAAAAAAAAAAAGGATCATGGAACAGAGAAAATAAAATCTGACTTAGACTGAGAGGAATATGTTGTATGGAGACAGAAAGTCAGGAAAAGCTTCCCCAATGAATTCAGTGGAAAGCTGAATGAAGCAGGAATGAAATTTAACCAGGTATAGAGAAGAAGGGAAATCATTTCCTACCAAGGAAGGAGCACTCCAGGACTCTGTCTCTAGGGTCAGTGTTCGCAGAGCCATCCGTGAGGGGGTAGGGGTGGACCATAGGGCTTCCAGGCCACACAAGAAGCACTTTCCCCTCTGGCAACCTAAACCTAGGTAAATGGAGAAAGTAATTTCAATGAGATGTGAGCACCCGAGACACCATATTTTCTGACAGTTTCAACTGGGCGGGATGAGTCCTGGTGGGGCTGAACTCAGAGGTATGGGCAGAATCAATCCATATTCGTTGCCTTGAACTGACTTCTGGCACCTGGTATGAGGCCAGATTACACGCCAAGCACCCAAAGATTCTGACCAGTTTGGCCAAAAATGGGAACCAGTAAGATTCACTTCGAAGCAACCACCCTCTCTGTTTCATAGCTGGAGGTCTGAGGACCACACTTTGTAAAACTAAGCAAGAAACTGCATGGATTAGAAGTGGAAGTGAGAGTAGTGATTCCACGAGTGTTAGCAACCAGGAGAGGAAGCATCATGTTTGAAAAATTGCACGGAGTGAAACAATTTTTGTTCCTTTTGGTTTGTTTGCCAGGGGCAAGATGTTGGAAAGTGGAGGAGAGAATAAGGCAATTAACTGGGAAGGCATTTCTAAATAAGGACGGGAACCAAAGTGCCTGTTTCTATGGATGACGGGAATGGATGTTCCTGTGAAAAGAGCAGAGGTACAGCCCAGAGGCAGGTGTTTTTCTTCATGGCTTTCTGTGATAGTATAGTGGTTAGTACTCTGCGTTGTGGCTGCAGCAACCTTGGTTCGAATCCGAGTCACGGCAAGAGCTGCATTGCTCATAAGCACCTCACTGTTTTTGCAACATTGCCATGGAGACAGCCTCGGAAATGCCTTTGCGAGATCGAAGACAAATGTTCTGCATCTTGCCCGTACTGGCCAGTAATGGCTCTTTTTTACACTCATATTTATGGATTCTTAGATTTCATATAGGATTCTATGGTGGATTTCATTTTCTTCCAGATTTATCTCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCCCCAGTCCCTGGGATTCTCCAGGCAAGAACCTCTAGTCGTCATAAAAGTCAAGGAGAAATAGGTGACAACCTGATGCTTCACATTGCCTCACAGAGCTACACAGTATATGAAAGTGGATCTCTCAAAGAGAAATCAGGGGAAAATCATATATTCTGTCTCATAAATAGCTATTAGAAGCCTAATCTACAAAACACCGAAACCTCACTCTGTTTGCCTTGGAGTTGGAGAAGAAACAAACAAAAAAAACACATATCTTCGTAGCTGGTTCCACTGGGGATCGAACCCAGGACCTTCTGCGTGTAAAGCAGATGTGCTAACCACTACACTATGGAACCAAGAGCTACCAGGTCTCCTGTCCCCAGATACAAAAGTTTCTGGCAAACTATATCAGCAAATATAATTATTGATTCAAAGATAGGTAGCTTTGAATACGGAAATTTTTGGTGCTTAATTACATTTCTACTGCATTTCAGTCTCATACAAGCTTAAAATATCTTCAAGTTGCATCATTTGTGAACACACTATTCTTGATTTGTGCCCCTTTGAACACTTCTAGATTAATCTGTCTGTGAACACATGATTCTTGATTTGTGCCCCTTTGAACACTTCTAGACTATATTTATCCATTCACTCAAAGAGTATGTATGTTGAACATGTGGGCCAAGCGCTTGTCAAAGTGCTGAGGATAGAGCAGTGCAACAATCAAAACCCCTGTGTATACATACCTGATCACCTTATCTTACCATGCTGTAGTTCCTAGCAAATAACAGGTGCTGAATAAATGTATCTATTTCAAAAGAATTATAAACAAAATTAGCAGCACTCTCATGACCTCTCTTTTTTGCAGCTGAGTTACAGCTAGACAATTGGGGGATGCCGGGAGCCGGCATATTGCATATTGAGTGCATATTGCATATTGAGTGCAGCACTTTCCACAGCATCATCTTTCAGGATCTGGAATAGCTCAACTGGAATTCTATCACTGCCAGGAGCCAGCGTGAGGAACTCCGCCCATGACAAAGGTCAGGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGGGTGTCCCTGGAAATTCTCAAGCATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTACAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTAACCTACAAACTCCTTTGGAAATCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGTTCAGAGCCGCCCAACTGTGAGAGGCAGGAGATGTTCTAAACTGTCTAAACACAGATTCTTTTGAGTAGTTAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAATTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGTTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAAGGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTTAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAACTTTTGCATATGATAAGTTTGCAGGAAGAGAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATACATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCACCATGTCGTTCTTTCTCTTACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCAT TCONS_00134882 s 3' 4066 TCONS_00134882 s 3' 4066 EMBV3_42987 GAGCTGTCCTTCTATGACGCTGAGCGCCGCTGCCACCTGTACACCTTCCACGCCCGCTTT Gene GeneID:518310|TRIM35:XM_002689793:11_cdna Constitutive 0 NULL GeneID:518310 8 GENE TRIM35 NULL tripartite motif-containing 35 EMBV3_04670 CCCCTCAACTTGTAAACAAGGGTTTGGGGGTTTTTAAGTGTGTAAAAATACATGCACACA Gene GeneID:528138|KLHL13:NM_001102511:8_cdna Constitutive 0 NULL GeneID:528138 X GENE KLHL13 MGC165978 kelch-like 13 (Drosophila) EMBV3_01099 ATACTTCGTCTCTCTCCAACGTGGCCTACAAGACTGCATCGTCTTACTGCTTACTCCTGG Gene GeneID:523293|CCNJ:XM_002698405:330_cdna Constitutive 0 NULL GeneID:523293 26 GENE CCNJ NULL cyclin J EMBV3_34361 CATCCATCACACGTCCTTTGAGGTCATGAAGGAGAACCCGATGGCCAACTATACCACGCT Gene GeneID:615528|SULT1C3:XM_002691279:352_cdna Constitutive 0 NULL GeneID:615528 11 GENE SULT1C3 NULL sulfotransferase family, cytosolic, 1C, member 3 EMBV3_22745 TCTGAGATGAATCCTCAAAGGTCAAAGTGGAGAGGGGCCAGTCGCGCAAACATCTTTCCT Gene BVT0102_133683 + 0 NULL GK000028.2:13893840-13902309 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41285 GCTGGCCCTGGGACCTGCCCAGGCCAAGGTTTTGTTACTTTGGAGAACTATGTGTAAATA Gene GeneID:539229|LOC539229:XM_002691660:403_cdna Constitutive 0 NULL GeneID:539229 11 GENE LOC539229 NULL similar to Protein FAM69B EMBV3_25702 GGCCTACCTCATCGCCAGCGGCTTCTTCAGTGTTTTTGGAATGTGTGTGGACACTCTCTT Gene GeneID:520625|SLC44A4:NM_001083442:141_cdna Constitutive 0 NULL GeneID:520625 23 GENE SLC44A4 CTL4 MGC154986 solute carrier family 44, member 4 EMBV3_13567 GGGAGCTCGGGTGGGGTTTATTTTGTTTAATGAACCTGGTGGAAAATGCAGTGGCTGTCG Gene BVT0102_171355 + 0 NULL GK000007.2:28395382-28414056 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39217 CCAGAGAAAGAAACTGTTTTCCCCCGGAATACTTTGAACCTGTTTTGGGGACAATGTTCA Gene GeneID:509485|PERP:NM_001034350:5_cdna Constitutive 1 NULL GeneID:509485 9 GENE PERP MGC127602 PERP, TP53 apoptosis effector EMBV3_17672 CAGGCTGGTTTAGTCATACCTATTACGGATAAGAATTGGAAGCTCTGGGGCATTGCTGTG Gene GeneID:519037|PLCE1:XM_002698389:280_cdna Constitutive 0 NULL GeneID:519037 26 GENE PLCE1 NULL phospholipase C, epsilon 1 EMBV3_25941 CAGCACCTTAGATCGCCTATTGCCCCCTGTTCTGCACTCCCAGGTGTTCCTTTTGTCATT Gene GeneID:787749|LOC787749:XM_002690819:62_cdna Constitutive 0 NULL GeneID:787749 10 GENE LOC787749 NULL hypothetical LOC787749 EMBV3_38446 TTTCATCCTCTCCCTTGCTTCTCCTCATCTCCGTGTCTTATGCAGGAGTCAGTTAAAATG Gene GeneID:327677|CD38:NM_175798:7_cdna UTR3_Alt 2 NULL GeneID:327677 6 GENE CD38 NULL CD38 molecule EMBV3_08904 AGGAGACAGATACCCCATGTTCAAGGTGGCCAGCACCCTCAGGCAAAGCTGACAAAGAAA Gene GeneID:100138149|LOC100138149:XM_002700445:70_cdna Constitutive 0 NULL GeneID:100138149 X GENE LOC100138149 NULL hypothetical protein LOC100138149 EMBV3_10537 TATTCTCCTGGACAATGTCAAGTGCCGTGGGGATGAGAGCGCCCTGCTGCTGTGCTCTCA Gene GeneID:539182|SRCRB4D:XM_002698113:372_cdna Constitutive 0 NULL GeneID:539182 25 GENE SRCRB4D NULL scavenger receptor cysteine rich domain containing, group B (4 domains) EMBV3_18838 GCACCTCACTAGCTGCTTTTGTCTGTTGGTGTCATGTTGAGCGAAGGTAGAATAAGCCTG Gene GeneID:541054|BTG3:NM_001034722:7_cdna Constitutive 0 NULL GeneID:541054 1 GENE BTG3 MGC127685 BTG family, member 3 EMBV3_14730 TAAGGGGGCTATTGTTGTTCAGTCACCAAGTCATGTCTGACACTTTGCGACGCCATGGAC Gene BVV0102_342218 + 1 EMBV3_21573 GK000005.2:58329306-58370253 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18029 TTAAGTCACACGCTGAAAAACCGTCATCCAAAAGTCAGCTTCAGGACTTCCCTGGTGGGC Gene BVV0102_132438 + 0 NULL GK000025.2:4168724-5331284 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42413 CACCATCATCGGACGAATCGCATCACTGGCCTCAGGAGTAGAAAATGAGAAGACGCCCAT Gene GeneID:100336502|LOC100336502:XM_002695019:269_cdna Constitutive 0 NULL GeneID:100336502 18 GENE LOC100336502 NULL ATPase, H+/K+ exchanging, alpha polypeptide-like EMBV3_20346 CTGCGCACATTTCTCTGGACACCCTATGGCTATTTGTTATCACTCCACAGTGGCTGCTGC Gene GeneID:510440|IVD:NM_001034382:136_cdna Constitutive 2 NULL GeneID:510440 10 GENE IVD MGC127338 isovaleryl Coenzyme A dehydrogenase EMBV3_22267 CATAAGGCCTTCAGGTCAACGGACACAGTGGGTTTTGTGGAGGCGGAGCTAAAGAAGCTT Gene GeneID:516410|GGNBP1:NM_001098993:128_cdna Constitutive 0 NULL GeneID:516410 23 GENE GGNBP1 MGC165763 gametogenetin binding protein 1 EMBV3_09804 GTCTGCAGACGGTCTTCACAAACGTTTACAAGATATTCCTGCTGCAGGCCTACAGGTTCC Gene GeneID:518884|TERT:NM_001046242:23_cdna Constitutive 0 NULL GeneID:518884 20 GENE TERT NULL telomerase reverse transcriptase EMBV3_17251 GCTTCGCCTAAAGGATTTCCCACATTCACCACACACATGAAGGTTTTTTCCAGCGTGCAC Gene BVV0102_073614 - 0 NULL GK000018.2:65353662-65491120 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085045 TCONS_00087766 2 XLOC_051771 XLOC_052587 Coding TCONS_00087766 XLOC_052587 Coding Coding ZNF154 18:65430354-65448000 j TSS65127 2602 1 TCONS_00087766_5 788 3 0.852706149050723 0.000922973397665659 0.000518021643450962 0.000757072086288758 0.000714750151781175 0.000973847059453545 0.000193583609758668 0.00041147668803759 0.00077506013162362 0.00104153463541591 0.000480356915328312 8.43419284927839e-05 9.07756247962568e-05 0.000212850347466328 0.00106421104676801 0.000122683554451648 0.00124874640576576 0.000525386374023343 0.00290683539212258 0.000368928273913499 0.00099185723315674 2.78359429722875e-05 0.00161334695919269 0.000494006441255104 0.000344293726610987 0.000344776060348307 0.000757805979709764 0.000236830411456854 0.000145996943792066 0.000151655070602295 0.00063428450167854 XM_005219821.1 ZNF154 PREDICTED: Bos taurus zinc finger protein 154 (ZNF154), transcript 0.0 4385 100.00 0.933897002305919 NM_005773.2 ZNF256 Homo sapiens zinc finger protein 256 (ZNF256), mRNA. 0.0 868 70.81 0.734435049961568 TCONS_00087766_5 sp|B7Z6K7|ZN814_HUMAN ZN814_HUMAN Putative uncharacterized zinc finger protein 814; 0.0 816 52.25 0.996192893401015 9 coding 0 0 0 0 -0.134643511611254 0.286411282968751 0.062330319748461 0.478664417480407 CCGGCGTCCTCCTCCTGGCGGCCATTTATATTACTTTCCTGTGTGTTGTCGCTCGGGGCGCTACGTTGGGAATGAGGTGACTGAATTAAGACGGTCCAAGAGGCAGCGCACAGAGGCGGGTCTCAAGTTCAGCGACGCCGTCAGGGGACCCCCGCGCTAGGCCCCCAATCGCGCCCGCTGTGCCCGCTTCCCGCCTCCTCTCCCGCCGCTCGCGGTCCTGCTCTGGCCACAGAGTCCGATGGCGGCGGCGGCGCTGAGGGATCCGCCTCAGAAGTGCAGTGTGACCTTTGAGGATGTGGCTGTGTACTTCTCCTGGGAGGAATGGAGACTCCTTGCTGAGGCCCAGAGAAGCGTGTACCTCGATGTGATGCTGGAGAACTATGCACTTATAGCTTCACTGGGTTGCTGCTGTGGAACAGAGAATGCAGAGGCACCTTCTGAACAGATCACTTCTCTAGGAGTGTCACAGGCTAGGACTTCAAAGGCAGCTTTGTCTTCCCAGAAGATCCACCCCTGTGAGACTTGTGGTCCAGTCTTGAAAAAAGTTTTCCACTTGGCTGAGCACCAGGAAACACAACACACCCAGAAAATGTTGAGGTGTGGAGTATGTGTGAAACAGTTTTGTTCTAGTGCAAATTTTCAGCAGCACCAGGAACACATGGGAGAGAAAACCCTCAGAAGTAGTGTGGATGAGGCCAAGTTTTTCAAGAGCTGCAGATTCCTTGTGTTACAGAAGCCATTTACCTGCAGGGAGTTTGAAAAGGACTTCCCAACCATTATGGGACACCTGCAGCAACAGACTACTCATACTGTGGAGAAGCCAAACAAAGTCACCCAGTGTGAGTCAACTTTACAGAGCAGAAGTCGTCACACCTCAGGAGAATGCAGGAAAGCCCTCAGCCCCAAACACACACTTGTTCAGGATCAGGGTGTCCATACTGGAATACCTTGTTTTGTGTGCAGTGAATGTGGGAAAGCATTCAGGTACAAATCTTCATTTGTTGTGCACCAGAGAGTGCACGCTGGAAAAAACCTTCATGTGTGTGGTGAATGTGGGAAATCCTTTAGGCGAAGCTCAATTCTTTATAAACATCGAAGAATTCATACTGGGGCAAGGCAATACAAGTGCAGCAAATGTGGGAAATCCTTAAGTCACAAATCTGTCCTCATTTCTCCCCACCCATGGTGCAATGGAGAAAAGAATTATGTGTGCAGTGAGTGTTCGAAATCTTTTAGCCATAGCTCAGTATTCATTCCACACAGGAGAGTTCAAACTGGAGAACGGCCTTATAAGTGTAGTGACTGTGTGAAATCTTTTACTTCAATGTCTGCACTCTGTTATCATCAGAGATCCCACACTGGAGAACGACCTTACATATGCAGTGATTGTGGAAAATCTTTTATCTCTAGCTCTGACCTCCGTTATCATCAGAGAGTTCATTCTGGAGAAAGGCCCCATGAGTGCAGTGAATGTGGGAAATCTTTTATCACTCGTACTGCTCTCCGTTATCATCACAGAGTTCACACTGGAGAAAGGCCTTACGAGTGTAGTGAATGTGGGAAATCCTTTACCCGAAAAAATAACCTTATTATACATTTAAGAGTTCACTCAGGAGAAAGGCCTTATGAGTGTAGTGAATGTGGGAAATCTTTTACTTTTAGCTCTAGTCTTCGTTATCATCACAGAGTCCACACTGGAGAAAGACCGTATGAGTGCACTGAATGTGGGAAGTCTTTTAACAATAGATGGACGCTCATTCGACACCAGAGAATTCACACAGGAGAGAAGCCTTATGTGTGCAATAAATGTGGGAAATCTTTTTCCTGTAGCTCCACCCTCCAGTATCATGAGCGAGGTCACCTTGGGGAAAGGCCTTACGGGTGTGATGAATGTGGGAGATCTTTTACTACTAGCTCTGCCCTCCGTTATCATCAGAGAATTCACACAGGAGAAAGGCCTTATGAGTGCAATGAATGTGGGAAATCTTTTATCTCAAAGTCTGACCTCCATTATCATCAAAGGGTTCATTCTGGAGAAAGGCCTTATGAGTGTAGTGAATGTGGGAAATCCTTTATCCGAAGGAATAACCTGCTTTTACACCAGAGAGTTCACACAGGAGAAAGGCCTTACAAGTGTAGTGAATGCGGGAAATCTTTTAACAATAGATGGACACTCATTCAACACCAGAGAGTTCATACAGGAGAAAAGCCTTATGTGTGCAGTGAATGTGGGAAATCATTTACCTCCAGCTCCACGCTATGTTATCATCAGAGAGTTCATGCAGGAAAAAGGCCTTATGAATGCAGTGAATGTGGGAAATCTTTTACCTCTAGTTCTACCCTCCGTTACCATCAGAGAGTTCACACAGGAGAAAGACCTTATGAGTGCAGTGAGTGTGGGAAATCTTTTACTTTTAGTGCCAGCCTCCGTTATCATCACAGAGTGCACACTGGAGAAAGGCCTTATGAGTGCAATGAATGTGGGAAATCCTTTAAGGATAGATCGCAATTCAATAAACACCGGAGAGCTCACACTGGAGAAAGACCTTATGAGTGTGCTGAATGTGGGAAATCTTTTAGCCAAAAATCTTCCCTCTCAACA EMBV3_35480 ACCAAGGAGAGTGAGCTGAAGAGCAAGGAGATCCTGGAACTGCTTTCGCAAATTCTGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08130 TGTCCGGGGGCCACACGGGCCAATGGAGAGATCTTTGAAAACAAAGGAGCCATGATGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01024 CCACTGCGTAAAGGACAAACACCTGTCCGTAAAAAGGATTTAAGTAGCCTCAGTCCCCCG Gene GeneID:515287|CDCA2:NM_001046194:39_cdna Constitutive 0 NULL GeneID:515287 8 GENE CDCA2 MGC137262 cell division cycle associated 2 EMBV3_29916 GGACCCTCCTGAGTGACCTGCTTCCCATGTACAGCGCTCTCGATCCTAATTACATGCACA Gene GeneID:513004|TPST1:NM_001077912:311_cdna Constitutive 0 NULL GeneID:513004 25 GENE TPST1 MGC143139 tyrosylprotein sulfotransferase 1 EMBV3_16269 GGGCTGCTGAAGACCAGACTTCCAAGGCAGAGAAAGATGTCCGTCCAAAGCTGAAAAATA Gene GeneID:509740|XAF1:NM_001035075:63_cdna Constitutive 1 NULL GeneID:509740 19 GENE XAF1 BIRC4BP HSXIAPAF1 XIAP associated factor 1 EMBV3_30637 GAAGCTGTCGTGACGCTGCCGGTCTTCATCGGCAACATCGCTGTGAACCATGTTCCATTG Gene GeneID:786098|ARRDC1:NM_001080365:86_cdna Constitutive 1 NULL GeneID:786098 11 GENE ARRDC1 MGC142598 arrestin domain containing 1 EMBV3_35347 CTCGGTGGTGAGTTGGAGGAGGGGACAGGCATACCTTTGGAAGCAGGGATTGGCTATATT Gene BVT0102_015004 + 0 NULL GK000015.2:29344914-29345978 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07160 GTTCCATATTTCGGCTCCCTTTCTGCGGACCCAACCTCATCGACCATTTCTTCTGTGACC Gene GeneID:615987|LOC615987:XM_002693810:51_cdna Constitutive 0 NULL GeneID:615987 15 GENE LOC615987 NULL similar to Olfactory receptor 5A1 (OST181) EMBV3_21445 AGGAACCTATGGATCCGTGTGCGTTTCTTGTCCGTGTGGCACGTTGTTTGCAGGATTTGT Gene GeneID:515515|SYK:NM_001037465:99_cdna Constitutive 0 NULL GeneID:515515 8 GENE SYK MGC127145 spleen tyrosine kinase EMBV3_25822 GGGTTGATCACCATCTCTCTCTTTGTCCCACCATCTCCCCTTCGTGGTCATCTCATGCTT Gene GeneID:100296463|LOC100296463:XM_002698042:5_cdna Constitutive 0 NULL GeneID:100296463 25 GENE LOC100296463 NULL similar to heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1 EMBV3_27865 GCAGTCAGGTGGATTACCTGGATGTAACTAAAAACTAGCCTGAGACTAAACATTCCCCAC Gene BVV0102_313516 - 0 NULL GK000001.2:67878002-68012077 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12698 CCTCGCTGTGGCTCTCACTCGACCTTTCACCTCTGTCTGTTGGAAGCAGTACTTTTTACT Gene GeneID:539180|RAB14:NM_001130754:16_cdna Constitutive 1 NULL GeneID:539180 8 GENE RAB14 NULL RAB14, member RAS oncogene family EMBV3_28239 CAAACCAGCAGGTCTCGGAATGAGCCTTTGTCTACCTCCAGGAGAAACTGGAAAGAGCAT Gene BVT0102_018714 + 0 NULL GK000011.2:7414637-7422135 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026818 TCONS_00026819 1 XLOC_015117 Coding TCONS_00026818 XLOC_015117 Coding Coding MFSD9 11:7419708-7432721 = TSS19159 3903 1 TCONS_00026818_3 485 0.0184473481936972 6 0.70050722410083 0.00154723440989988 0.00073888019100673 0.0019766739148239 0.00144252725097708 0.000866326092328948 0.000344594089718145 0.00051394708963437 0.00145991470602891 0.00199208876608416 0.000506003157961183 1.82037346750331e-17 4.58062182767313e-05 0.000111005434714857 0.000547973126048729 0.0007000494640957 0.00148676151385578 4.92034537871981e-05 0.00211560520805484 0.000442027060544237 0.00220191970201541 0.000645051858540508 0.000626256726616038 0.000389447813593362 0.000608303565965063 0.00260593176080897 0.0014513202811897 0.000635946763780104 3.95820254029246e-05 7.36003136097883e-05 1.90416536300518e-05 XM_591971.6 MFSD9 PREDICTED: Bos taurus major facilitator superfamily domain containing 9 (MFSD9), mRNA. 0.0 6518 100.00 0.925698180886498 NM_032718.3 MFSD9 Homo sapiens major facilitator superfamily domain containing 9 (MFSD9), mRNA. 0.0 1099 76.88 0.378939277478862 TCONS_00026818_3 sp|Q8NBP5|MFSD9_HUMAN MFSD9_HUMAN Major facilitator superfamily domain-containing protein 9; 0.0 594 67.95 0.962886597938144 2 coding 0 0 0 0 -0.0559281792133283 0.755253248196871 0.0377153812911908 0.470957735144658 CGCATGCGCATGGAGCCGGGCGACCAGACCAGCGGCATGGCTCCGGACCGGGGTTTGGTATCAGCAACACGGAGACCGCGGCAGGAGCCCGGGACAGGGACCCAGGAAGGGGCTCCTGGCCCCGGGGCTGTTCGAGCCCGCCGCTTCCTGCTCTGCCTCTACCTGGTAGGCTTCCTGGATTTGTTTGGTGTGAGCATGGTCGTCCCTTTACTGAGCGTTCATGTCAAGTCTCTTGGAGCAAGTCCAACGGTTGCTGGGATAGTAGGCTCCTCCTATGGCATTTTGCAGCTCTTTTCCAGCACGTTAGTGGGCTGCTGGAGCGACGTCGTTGGAAGACGGTCTTCCTTACTGGTGTGCATCCTGTGCAGCGCCCTGGGTTACCTTCTGCTCGGAGCATCTACCAACGTGTTCCTGTTCACCCTGGCTAGAGTCCCTGCGGGTATCTTTAAGCACACACTCTCCATCTCAAGGGCCCTGCTCGCTGATCTGGTCACAGAGGAGGAACGGCCGGTGGTGCTGGGACAGTTCAACACGGCGTCCAGCATGGGCTTCATCTTGGGCCCAGTGGTCGGCGGGTATCTGGCTGAGCTGGACGGTGGGTTTTATCTCACGGCCTTCGTCTGCTCTTCTGTCTTCGTTCTCAATGCTGGTCTCGTTTGGCTGTTTCCATGGAGTGAAGTAAAACTCAGCGGTCCAGAGGATGACTTGCCACGGGGCAGGAACCAGGCGCTTTGGGAAAAGACAGACTCTGCCGTGCAGAGGGCAGCCAGTGCCCATGGGACCCCAGCCAGCCCCCAGGGGACCCCAGTGAGCAAGGGGCCGGCCAGACTGCTCTGGGCGGAGGTGCTGGCCACCCTGTGGGGCCTGAGGAGCCTGGTGCTCTCCGCCCTGTGGGTCGTGTTCCTGGTGCGCCTGCTGATGGCCGTGGCTGTCATGCTGTACTACAGTAACTTCGTCCTGGCCCTGGAGGAGCGCTTCAGCATGGGGCCCAGGGCTGCTGGCTATGTCACCAGCTGCGGCAGCGCCCTGGGCGTCCTGGCCGGCTTCGCCCTGGGGCCCCTCCTGCGGCTGTACGGCCACCAGTCTTACCGGCTCCTGCTGCACTCCAGCGTGCTCACGTCGATGCTGCTGCTGCTTTTCGCCTCGGCCCGCAGCCTGGATGTCGCAGTCGCCTGCTCCGTGCTCCTGTCCTTTTCCACCGCCATCGGCAGGACCTGCATCACCGACCTCCAGCTGACCGTGGGTGGGGTGCGGGCCGGCGGCAGCCTCCTGGGCATGGGGCAGTCGGTGACGGCCGTGGGCCGGGTCCTCGCCCCCATCCTCTCGGGGGTGGCCCAGGAGGTGAGCCCCTGCGGCCCTCCCGGCCTGGGGGCGGCCTTAGGCTTCGTGGCTGTTGTCATCATGTCACGAAACAGACCTCACTCTGGTGGCCAAGGGGGTGATCAATTAAAAAGCGAGTAGGTGGATTTAGACAGCAGGAAGAAACAATACCAGAGGTGTGTGGATGTGGGCAGAGGCCCCAAGATGGGTGCTATGGAAAGGATCGATGGTGAAGAGAAATGACTTCTCTCCAAAAAGAAGCTCTGGTCGTGGGTGTCCCGTCAGGCCTGCAGGACAGGTAGAATCAAAGCAGTACATAGACACGTGAAGACGGGAGCTGAGCTTGGCTGGAGGGGAGGGTAATCAGCGTTCCCCTAAGAGTCTGCTCTTCATCTGGCCGGTGAGCCCGGGGTTTTCAAGGGGAAATGGTGGTGGGCTCACAGAGCAGGACACGTGCCAGGAGGGGAGAGACCGCAGGGATTTCCCTGCTGAACAAAAATAAGGAAACATAAATGAAATGCTGGTCAGCTGGATGCGGATGTCAGGTGGAGTTCCAAAGCTCCAAGGAGGCTTTTCTGCCACCAAGATGCCGGAGACAGAAGAAGCTGCTCTCCTGAGACCAGTCCGTCCCTGCTTCAGGGCCTCACAGCGTTCCATCTGGGGAGCTGGCTCAAAACCAGAGATGCCCATCTGAGCCCGTGGACCCAGGCGAGGCCCTGGAATCGGGTGTGTTTAGTGAATGCTCTTTCCAGTTTCTCCTGGAGGTAGAGAAAGGCTCATTCCGAGACCTGCTGGTTTGGATTAAAGTAAAAGTCAGAGACTCGGTGGTTATTAATAGCTAACGCGTTTGGATTGTCTGTTAAAATCATGTGATCACATACAATGGGTTCCACGTCCCCCGGCTCTCGGCAGTCACACTGTATACCAGGGGAACCCAGTCCTAGGGGCCCTTCCCCTGTGCCCAGGGTCCCCGGGGCCCCCGCCCTGCAGAGGCCCGAGCCTGCCTGCAGCCACATCTCCCGGAGACCGGGCGTGATGATCTATCTGCTCCTGAAAGAGGGGAAAGAACCTGGTGGAGAAACCAAACCACTTAAATGCTTTTCAGATGAACGTCTTCAGGATAAGAGAGAGACTGGCCTCAGGCCGTGTCACGGGTGCTACAGTGTCTTTGTTGAAAATCATTTCCTCACTTTCATGTTGACATCACCCCTGAGAACAGAAGCGCTGTGTTGACCTACAGGGAAACATTCTGGGCACCTCCAGGGGCCTCGAGCAGGGTGAGCACAGATGCCCGGGACACTGCAAGCACTCACTGACTCTCCAAGGTGACGTCAGTTACTGGTACAGACGGTTTAGGGGCCTCCTCTCTCCACACAGACCCCCAGAGCTCACATTCCTTTCGGTCCTTTTAATCAGTCTGCTAGGGTTGGATTCCAGTCTTCCACCTGATGTGTGTAATTATAAATGATGCTTTAATACACTAATTTGTTATAACTTTAATACTTGCAGAGCAGAAAAAAATTGTTCTGCAGCTGCAGACGTGTGTTGAGTAAACTCAAATATTTATGATGAAGAATTAACTGCAGGTTTGAAGATTGTCCTTGTTCCTGTTTAGCTACAAGAAAAACGTCAGCTTCTTATTAAGTGTGAACTTTTGTACAAGTGCTTTTGAGGAAACCAAAATATGATATAAAATGGCCTCGCTCTGAGTAAGTGTACCAAGTTGTCACAGAGATTAGACTCAAACGAACAATATATAATCAAGGGTTTATGCGATGAAGGAGAATTTCAAAAGAATTTCTCCAAAGATTGTCTTTTCTTCACTCTCAGAAATAGGTTTCTGAGAAGCTCTTAAATCTAGCCATGTGTTTATTTTTTTAAACTGTAGCACTTTACTTTTGAAGTTAAAGCCTGTACACTTAATGAGGTTTTATAACGAACTAGAGACATAGAAATACTGAGAATCCTAAAAATTGATCTCAGTATGGAGAGCAGACACTTTTGTTATTCTCTACTACTACAAATTATAGTGTTTCGTTCCCGTGATTTTTTCAGATGTTTATATTAGATAGTCTAACATGTTGCTACTCGAAGTGTGGGCCAGGGACCAGCCACTTCCCGTCCCGGGAGCTCTTCGGACATGCAGACGCTGGCCCACCCCACGCCTGCGGGAGTCATTTGCACAAGACACCCAGCTGCTTTGTTTGCACAGTGAAGTTTGAAAACCACCACCAGTCTGATGGACACTCTTTGTTTATAATATGGCCTCAGGGAAATTAAATCTGCTCAAAGTTTGTGTTTTGTTTTTTTTAATTTTGAGTATCTTCTGTCATCTTTTGCAATGCGTTAGGTCAAGCCACATGAAATTGCAGTTTTTATATGTCAAAAATACCTGAAGTTTACATCTGGTTCAACTTAAATTAACTGTTATGATGACATGATGAAATCTCACTTCAGAGACATTGAATGTGCCCGAGAAGTTTGTAAAGGAAACGGCCCCCTGTCCAGCACTGTGTAGCAGAGCTGGTATATTCTGTGAAGCAGCACGGGGCTTGGGCGTCCAAAAGACTTGGCCTTTTCCAG EMBV3_42460 TGTTGATCTCCACACTCACTGTTCCTATCAGCTCATGTTGCCAGAGGCCATTGCCATCGT Gene GeneID:538785|STAMBPL1:NM_001076129:40_cdna Constitutive 0 NULL GeneID:538785 26 GENE STAMBPL1 MGC143324 STAM binding protein-like 1 EMBV3_11004 GGCAAAAACCCAAAAAACTGGACTGTATGCTGTAATGACAAGGCTATGGGAAAACAAGTG Gene BVV0102_438917 - 1 EMBV3_04699 GK000012.2:28488432-28544048 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00039021 1 XLOC_022841 NonCoding TCONS_00039021 XLOC_022841 NonCoding NonCoding - 12:28504237-28505847 - TSS28522 1610 5 TCONS_00039021_2 57 0.717391304347826 1 0 0 0 0 1.03157193605548e-05 0 0 0 0 0 4.25931286021323e-07 1.4218529312684e-06 1.33255469745013e-05 0 0.000154851624013297 0 0.00104990167647648 9.37451841044303e-07 0.000677921281541434 0 0 0 0 1.13963265229251e-06 1.04128210792539e-05 0 0 0 7.15914062948142e-05 8.14125891620342e-05 0 XR_083420.2 LOC510382 PREDICTED: Bos taurus guanylate-binding protein 6-like (LOC510382), 9e-61 239 92.12 0.101863354037267 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 1e-15 89.7 76.61 0.0763975155279503 0 noncoding 0 0 0 0 -0.054027769137025 0.747267887071388 -0.00465931471113454 0.921038468472955 CTTTGGCCCGTTTTTTGATTGGGTCATTTATTTTTCTGGAATTGAGCTGTAGGAGTTGCTTGTATATTTTTGAGATTAGTTGTTTGTCAGTTGCTTCATTTGCTATTATTTTCTCCCATTCTGAAGGCTGTCTTTTCACCTTGCTAATAGTTTCCTTTGTTGTGCATTAAACCAACAATTCCAATCCTAGGTATTGACTCAAGAAAAATAAAAACATGTTTGCAAAAAGATCCATACAGGCCTTATTCTTAAAAATGAAAAAACTGAAAATAACTCAAATACCCATCAACAGAAGAAAAAATAAGCTTGACACATTCATCCAATGGCATACTACTCAGCAATAAAAAGGACTCTGACACATCCACCCTCACAGATGCGTCTGGAAATATATGTTAAACAAACAAAGCTAGATACCAGAAAAGAAGACACTGTACGAAGACCAAACAAAATACCTACAATGTTAGAATTCAGAGTTTTTGGGGGAGAGGGGAACTGAATGCAAAGGGTAACCAGTGAACTTTCTGGGGAGAGATGAGAATGCTTTATCATCCTTTGGTTACCAGTTAAATGAGTACAACTGTCACACCTAAAAGTCACATCTAAAACAACTAAGGTCTGTACATTTTATTGTATTTAATAAATATCTCAATGTAAAAATTAAATTTTTAAATAAATGAGTTCATAGTATTAATTTTCCTTTTTTTTCCTTTGTCCTGGGTTGTCTACATGTAGTGTATGTATACATGTATCAATGGGTTCTCGGTAATTATCTCTCATCATCTATGTGCCAAACACTAGGCTAGGTTCCATAAGTCCGTAAGTTCATGCCCTCAAGAGGGTAACAATCTAGGGCAAAGAAATACACACCTAGTAACAGTACACAATGCGAGGGTTTCCATTATAAGGGTATACACAGGGGCCTGAGCGAAGACTCAGGCGACAGAAAAGCCTCTTCATTGGAGAATGACAAGCGCCAACTGTGGACATGTAGACAAGCAGGAACGGACCATCATAAACAGAGAAATACCCCACGCAAAGACACAGACAAAGGGTCGAACTCGACAAGGAGCTAGGAGCAGTCCAGTGTTCTGGGAGCTGGAGAAGCTATGAGGTGCCATCCTAACGCTACGGCCCTTGGGCTATGGAGCCAGTGAAGAGCCACTTGACAGTTTTAAGCAAGGGAATGATGCTTTCAAATTTGCAATTAGAAGTATCACTTTGCTAACAGTGAGAATGACAGAAAGCCTAGAAGGGAGTAAAAATGGAAGCAATCTGTCAGAGGACAACTGCAACAAGCAAGTTGTTTCCTTTTAAAAATTCAACCAAGGCACATGAACTGAAGAGAAATTGAAGAATCCCCAAAATGGACAGGAAAATGACTAAAGATTCAGATCAGACAGTTCACAGAGAAAAAAAATGAAGCTCAAAATGGCCCAAACAAATGAACGGATGCTCAACTTCACTCACAAGAAATGTAAAAAATGAAAGCTACACTGAGGTATCGTTTTTCACCTATTATACTGGCAAAAACCCAAAAAACTGGACTGTATGCTGTAATGACAAGGCTATGGGAAAACAAGTGTTCTCACACATACATTATTGTTTCAACC TCONS_00036611 . 5' 29859 TCONS_00036611 . 5' 29859 EMBV3_17677 CGGCATGGGCCTGCACTACGTCGCCTTCAGGAAGCTGGAGCAGTTGCATCGTAGCTTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37378 GTGGGTAGGCTGGAAATGAGCACTAAAAATTAACAAACTTGTAAGTGTGAAGAGTTTGGG Gene BVT0102_021307 - 1 EMBV3_36931 GK000003.2:51112406-51195434 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00751 CACCATTACACGAACTCCCCACTCCAAGCACCTTTTCTTACCAACACAGTGCTCGCCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22231 ATGCCGGAAAGTCGGCCAAGAAAGACAAAGATCCAGTGAACAAATCTGGGGGCAAGGCCA Gene GeneID:785516|RPS25:XM_002685997:352_cdna Constitutive 0 NULL GeneID:785516 3 GENE RPS25 NULL similar to mCG10725 EMBV3_36317 CCATGATAAAGCGGGGAGGGGAAGGTCACCTGTAGGCTCAATTTTATGTTTGAAGCCAAG Gene GeneID:534560|TMEM150C:NM_001078001:19_cdna Constitutive 2 NULL GeneID:534560 6 GENE TMEM150C MGC152232 transmembrane protein 150C EMBV3_06011 GAGTACCTGGAGAATGCCTTGAAGCTGATTCCAGGCATCAGAGCAGGGGCAAGGTGGTAG Gene GeneID:533657|GBP6:NM_001075995:168_cdna Constitutive 0 NULL GeneID:533657 3 GENE GBP6 NULL guanylate binding protein family, member 6 EMBV3_01566 CCCAGGAGGACTGTGAAGAAGGAGGCTTGTGTGGAGGCCATATCAAAAGTACACTCTGTA Gene BVT0102_055190 - 1 EMBV3_15148 GK000028.2:12978394-13050366 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40411 TTTTTGTAAGTATTCTTTATCTTTTATAAGGCAGCATGGTGAAATGCAGTGGTTATTAAA Gene GeneID:533692|IRAK4:NM_001075998:27_cdna Constitutive 3 NULL GeneID:533692 5 GENE IRAK4 IRAK-4 MGC137816 interleukin-1 receptor-associated kinase 4 EMBV3_24412 GCCCGGACGTTGCTCGGTCCTGACTACAGCGACGAAAATGACTACACTCACACTTCCTAT Gene GeneID:532808|CLVS1:XM_002692668:21_cdna Constitutive 0 NULL GeneID:532808 14 GENE CLVS1 RLBP1L1 clavesin 1 EMBV3_29145 GTGTTGATCATCGCGTGGAAGTTCAGAGCAGCAACACAGTGCGAGTTCTCCAAACAGGAG Gene GeneID:539869|DCUN1D1:NM_001102233:52_cdna Constitutive 2 NULL GeneID:539869 1 GENE DCUN1D1 MGC165752 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) EMBV3_20027 GGTGAGAATGATTGTGGACTGCCATGCTACCCCTGTGCGGGTTACTCAGGATGAATCACT Spike ESK0901 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33804 TTGAAGACAATGCCTCCCTACTATCTTGGGGCCAAAATAGAATCTGATCGAGTCATCGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08540 GAGACATGCAGCTTAGGACACAGTGACGCATACCCCCTGTACCTCAGTTCGTGGTATAGA Gene GeneID:407210|Grb10:XM_002686637:40_cdna UTR3_Alt 3 NULL GeneID:407210 4 GENE Grb10 NULL growth factor receptor-bound protein 10 EMBV3_22408 AGAGCTGGACATGACTGAGCGTGCGTGCATAGCATTTTTCTAAGGAAGTCCAAGACAATC Gene BVT0101_005558 + 0 NULL GK000001.2:148773782-148908098 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08988 TCCCACATGCTCATATCTCTTCCTGCTGGTCTGTCAAAAATTTCAAGCATTAAGAGAGAC Gene BVV0102_178705 + 0 NULL GK000002.2:103950563-104492354 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34213 GTGTTGCATGGAAGTACGGTTGCTTCTGTGTACAAGGGGAAAATGCTGGTTGGAACTGTG Gene GeneID:523798|PON1:NM_001046269:45_cdna Constitutive 0 NULL GeneID:523798 4 GENE PON1 MGC137153 paraoxonase 1 EMBV3_22857 GTCCCTATTCCTTCCATGACAGAGCCTTAGCCTGTTTGGGGCCCAGAATCACCCTCTTCA Gene GeneID:529706|CES8:NM_001167834:324_cdna Constitutive 1 NULL GeneID:529706 18 GENE CES8 NULL carboxylesterase 8 (putative) EMBV3_29602 ACCATCTATCAGTCGCTGCCTTATTTCGAATCATTTGGCACTTACTCCACAAAGCTGCCC Gene GeneID:618814|PTPLAD2:NM_001076522:96_cdna UTR3_Alt 2 NULL GeneID:618814 8 GENE PTPLAD2 MGC142592 protein tyrosine phosphatase-like A domain containing 2 EMBV3_16581 TATGACTTTGGATATTTTATGTGCTCCCTACCTGTTTAAGGTTATGGAAATAAACTGGAG Gene BVT0102_198853 + 0 NULL GK000004.2:31694055-31742101 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22982 TAGGGGCCTAGAATTTGGCTTTGTAGGGATGGGTTTGGGAAGTCTGAAGAGTGCTGGGAC Gene GeneID:525900|SHOX2:XM_002684958:226_cdna Constitutive 1 NULL GeneID:525900 1 GENE SHOX2 NULL short stature homeobox 2 EMBV3_31399 GGCAAGTCACTTGACCTCTGTGTGCCTCAACTTCCTCCTCTGTAAAATGGGGACAGTCCC Gene BVV0102_273807 + 0 NULL GK000013.2:66292991-66306259 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26876 GAGTCTCACCAGTGGTTTTACATCTGCAGAGCATTGAGGACTGGGCTGACTTTTTGAGAG Gene GeneID:613759|UHRF2:NM_001102270:2_cdna Constitutive 0 NULL GeneID:613759 8 GENE UHRF2 MGC139180 ubiquitin-like with PHD and ring finger domains 2 EMBV3_03418 CCGCGGCTCCACTGCTGGTATCCCTGTATCTACAATTGCCACCTCCAGATTTGTATTTTG Gene BVT0102_132525 - 1 EMBV3_35020 GK000003.2:53419679-53470478 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177596 1 XLOC_107370 NonCoding TCONS_00177596 XLOC_107370 NonCoding NonCoding - 3:53466504-53467002 - TSS132355 498 2 TCONS_00177596_2 52 1 0 0 0 0 0 0 0 1.17102556850661e-05 0 0 0 0 0 0 0 0 0.00010607060000861 0 0 0.000820768569599948 0 0 0 0 0 0 0 0 0 9.74818290655762e-06 0 0 noncoding 0 0 0 0 0.0768018349664641 0.55192427219062 -0.00873696075385597 0.849080010342964 AATGGATAAGGAAGGAAGGCAAAAAAAAAAAAATCAAAATACAAATCTGGAGGTGGCAATTGTAGATACAGGGATACCAGCAGTGGAGCCGCGGGGGAAGGTGGTACCTGCTTTCTTCTTCTTAGATTCTTCCATGTGAAACTGGGTTCTTTCTCTACATGGACCACAGATATCCCATTTCTCTTCTAGCCCAGATAGTGGAGTATAGTGACTAACAGAAGAAATCCAGTAAAACTAAATGTCAGGATGATGCAGGCTGGGTTAGTAACAGCTTGAGAATCTGGGTCTGAAATGCCAGGCTGGACAGGAAAGTCACATCTGCCCAGAGGGCCTGGCACATGTTACTGTTTTTGTGCACCCACCTTTCTGGACCTGTTGAATGTCACTCTCTGCCACGTTTACTCTGCATCACATAGCCCAAACAGAGCTTTCTCATTTCAGAATAAATGACCATGAGTAAAGACAGTCATGCCTTGAACATTTAGTGAAGGTACTAAT TCONS_00169937 . 5' 3476 TCONS_00169937 . 5' 3476 EMBV3_03816 CTAGGTCTGCAGGTCCCACCAGGTCCGCCTCTTGCCTGAAGCCTTAGGGGTCACCCAGAA Gene BVV0101_083973 + 1 EMBV3_28572 GK000018.2:26043125-26077403 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25387 GCTCCTTGCCCTGCTTCCGGAAGCACAAAGAGCAGTGCAGGCCTGCAGCTGGTCCTGTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36406 GGGATTTACGAGGATGTTGTCCGGGGGTTCCTGCTCCAGAGGATCAATCGAGAATTGAAA Gene BVV0102_095335 + 0 NULL GK000007.2:5493985-5517842 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215243 TCONS_00215240 TCONS_00215244 1 XLOC_130874 Coding TCONS_00215240 XLOC_130874 Coding Coding - 7:5494172-5503637 - TSS160798 2545 2 TCONS_00215240_5 217 0.295874263261297 7 0.731825866441251 0.0025506007497341 0.00167459484850712 0.00246475100318148 1.09085415283999e-07 0.00221200289581366 0.000446140162897845 0.00161494087016603 0.000721080894754913 0.00235896577859592 5.41406974088146e-05 3.59778887714634e-06 2.52894949878012e-05 5.63177383230596e-05 0.000341861714837912 0.000444997249761346 1.08608549427943e-09 1.47045028120102e-10 4.75373090648898e-12 0.00386389574075439 0.00345077953201225 0.00029608250740647 3.20275552586217e-10 4.2261551931481e-10 3.85982655745368e-11 0.00214998400066954 0.0020164782448478 0.002845328788636 4.92994700961551e-10 8.35987958670734e-06 4.34608688778931e-05 XM_005208586.1 FAM129C PREDICTED: Bos taurus family with sequence similarity 129, member C (FAM129C), mRNA. 0.0 1647 100.00 0.358349705304519 NM_001098524.1 FAM129C Homo sapiens family with sequence similarity 129, member C (FAM129C), transcript variant 2, mRNA. 0.0 695 79.01 0.322593320235756 TCONS_00215240_2 sp|Q86XR2|NIBL2_HUMAN NIBL2_HUMAN Niban-like protein 2; 3e-94 292 77.01 0.984126984126984 0 coding 0 0 0 0 -1.25857841897236 0.0205713965739702 -0.173660011177704 0.0421549115492431 CTCATTGGCTGAGTGGTGGTAGTTTCTCATTGGTTGGGGCTGTTACTGGTTAAGGAGAAAATCTTCCTCCTGTGGGAGTGGTGTACTCATTTGGGGAGATGCCATGGGACCCAGAGCTGATGCAGATTTGCTACCGAGAGGCCAAGAGGAGCCGGGGGCAGCTGGGGCAGCTGGCAGCACTGTTTGGCTTCTTTGGAATACAGAGCCTAGTGTTTGGGGCCCAGGATCTCGCACAGCAGCTCATGGCTGACGCCGTGACCACCTTCCTACAGCTGGCCGACCAGTGTCTGACCACGACTCTGGACTGCGACCAGGCCACCCAGCAGCTGGAGAAAGTCAGGGGGCGCGTGCTGAAGAAATTCCAGTCGGATAGCAGCTCGGCGCGGAGGACTTTCATCCACAGCTGGCTGCTCTGCATCTTCTTGCCCTTTGTGTTGAGCCAGCTGGAGCCGAGCTGCAAAGCGGAGCTGCTTAAGTTTGAAGGGGACGTCCTTGCTGTGGGCAGCCCTGCCCTGACCATCGAGGGGATTTACGAGGATGTTGTCCGGGGGTTCCTGCTCCAGAGGATCAATCGAGAATTGAAAAAGGCCCTTGGGGCCAGAAACATATCCTGCATTCTGGATGACTGCTCAGAGGAGCCATGGGACCAGGCAGAAGCAGATGTATAAACTGAGGCTCAGAGAGGGACTTGCTCCAGGCAACCAGGCCCCAGCACCGACGTCTAGCCACTACGCCCACGGCCTCCTCTGGGGACATTCCAGCGCTGAAGCTCTGCCCACATTTATCATCATTCTCAGCGGATAAATGTCTACTTGTGGAATTTCTGAGTCAAAACATATGTACCGTTTCAAGGCTTATTATGACCCCTACTCCTCTCCAGAAAGGCTGTGCCTTTTATTAACACTCCCACCAACAGTATTTGTGCATATTATCCTTTCCAAACACTGGGACTTTTCATGAAAGAAAGACTGCCAATCTGATAGACACACACAGATTGCATTGTTTTAATTTCTTTGATGACTACGTGCATGCATACTAAGTCACTCAGTTGTGTCTGACTCTTTGTGACCCTTTGGACTGTAGCCCATCAGCCTCTTCTGTCCATGGGATTCTCCAGGCAGGAATCCTCAAGTGGGTTGCCATTTCCTTCTCCAGGGCATCCTCCCGACCCAGGGATGGAACCCTTATCTCTTACATCTTATGCAGTGGGAGGGGGGTTCTTTACCACTAGCGAGCATCACCTAAAAATATCTCTACTGACCATTTATATGTTTGTGTGTTTTTATGTTTTTCTTTGTTTTAGTGAGTTGCCTGTTCAGAGCTTTTACCTACTTTTCTCTTCAGGAGAGTTAATCTTTTTCTTATTGATCTCTAATAACTCTTTATATATTAAGGATATTAACAGTTTTGTGATACAAGCTATAGATTTTTTTTCCCCTCAGATTTCTGTGTGCCTTTGGGATTGTTTACTTGCTCCAAATCTTAACTTAGTATCAAGTTTCCCAGCTGACATTCGAGCTTTTACTGGTTTCCCCCTGCCTGCCAGAAGCCATCAATCCACTGGAGGTTGGCAGCTTCTGCACATCACAAGCCTTCCAGCTGCTTCCGGCGCCAGTCCCGAGAGGGATTTCCCCAGTGTTTTTCTCAGTTCAGCTTTCAGAGGGAGGACATGCAGACTCCCTGATTTTCTCCCATTCTGCCCTGGAATGTTCATCCTCCCCCAGGAGAATGAGCTTTTCCTTAGCTTTCCCTCCTAAACTTTTGCCTCATGTCCCTTGAGCACATTGAGGACACGCAATCTGTGCTCTGAATTTTACTTCACAATGTTGAGCCTCCCCCTACCGCTCACGTTAACAGACATCTGAGCATCTTTCTTAAAACAATTTTTTATAACGACACAAAAACGATCAGGGAAGCCTGGTGTGATGCCGTTCATGGGGTCGCAAAGAGTGGGACACGACTTAGCAACTGAACAGCAACAAAAAGTGATTAGAAACACATTAATTATTGGGAAAAAATTAGATTATTGGAAAAAAATAGATTATTGAAAAACAATCCCCTTGTAGCATTTCTAGGGAAACGCCCACCTTGTCTCCAGAGCGTGTGCTCAGCGAGTTCCATCCTCTGACAATCCTGAGGTCGTTATGACTCCATTTTACATATGGGCAAACTGAGGCTCACACAGCGACTCCACGCGCGGGCTGGATTTATAGCCAGGTCTGGGGACTCCAGGGCCCATGCTCTTAGTATTCAACAAACCCTGAGGACATCTCTGGGAGGTGGAAAACTAAGACGGTAAAACCATGTTGCAGCAGAGGAAACTGAGATTCAGACCTCAGGAGTCTCAGCCCAGATCCTAACTATCCAGGTCTGCCTCGTGACACAATCGGGGTCTTACACAAATAGGAGTGGGACAGAGAATCGGGTTGATCCCGGAGGGGAGCAGTTTCTAAGGCAAGGCAGATTCTGAGCTCTGACACCTTTACTGCACGGACCCAAGTTCAGAGCGCTCCAAGTCTATGAGGGGGCGGGGGATCCCGAGCCT TCONS_00215234 TCONS_00215235 TCONS_00215236 TCONS_00215238 s 5' 189 TCONS_00215234 TCONS_00215235 TCONS_00215236 TCONS_00215238 s 5' 2073 EMBV3_42869 CCCCATGGCTTGAAGTGACAGCAAGGAAAGAAGCACCAGTCAAGTTGTGTCAAAGCACCA Gene GeneID:536619|PAIP2:NM_001034636:11_cdna UTR3_Alt 1 NULL GeneID:536619 7 GENE PAIP2 MGC128370 poly(A) binding protein interacting protein 2 EMBV3_32102 TGAGCCTGCCCGCCCTTGACCGCCGCCCGTCCCAACCCGGGCTGCTGAGAGCGGGCAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15705 TGGTCACCTTACCAATCTTACACATCTAGGCCTTGGAGAGAACCTACTTACTCATCTTCC Gene GeneID:511417|SHOC2:NM_001101943:33_cdna UTR3_Alt 2 NULL GeneID:511417 26 GENE SHOC2 MGC151791 soc-2 suppressor of clear homolog (C. elegans) EMBV3_15585 CAGATCTCGGCTCCGGTGTCGGAGCAGATGGGGCTATCTTCACTTTGGTGTCTCTGAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04276 CCGGGCTGTGGAGGACCTGCTGCCTAGAAGGGGCTGTGAGGGCCTCCAGCGTCTTCCCTA Variant GeneID:538496|CACNG3:NM_001078014:374_cdna 634^717 1 EMBV3_41051 GeneID:538496 25 GENE CACNG3 NULL calcium channel, voltage-dependent, gamma subunit 3 EMBV3_11357 AGAAAAGGTCTCTGAGGTCTGGAGGAGTGAAGAACTCACCGTTAGGAAAGGGGCCCACAT Gene GeneID:100297476|LOC100297476:XM_002686178:351_cdna Constitutive 0 NULL GeneID:100297476 3 GENE LOC100297476 NULL hypothetical protein LOC100297476 EMBV3_05785 TGGGAAATGGCTCGTCGTTGTATCACAGGAGGAATAGTCGAAGAGTACCAGCTGCCGTAT Gene GeneID:404101|BMPR1A:NM_001076800:11_cdna UTR3_Alt 2 NULL GeneID:404101 28 GENE BMPR1A BMPR-IA bone morphogenetic protein receptor, type IA EMBV3_28721 CCAGGCTCCTCTGGCTATGGAATTCTCCAAACACGAATACCGGAGTCGGTTGCCATTCCC Gene BVT0102_268538 + 0 NULL GK000001.2:62392882-63176503 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008036 1 XLOC_003596 NonCoding TCONS_00008036 XLOC_003596 NonCoding NonCoding - 1:62738962-62739288 - TSS5113 326 1 TCONS_00008036_1 45 0.552147239263804 1 0 0 9.24702191422799e-05 0 0 0 3.29177098525135e-05 7.15547057751769e-05 0.000272149071751142 0.000435651712073137 0 0 0 0 0 0 0 0 0 0.000153977025624362 0.000375014312928551 0 0 0 0 0 0.000151283048758749 0.000179729038121866 0 0 0 XM_611147.7 PPP1R15B PREDICTED: Bos taurus protein phosphatase 1, regulatory subunit 15B (PPP1R15B), mRNA. 3e-45 185 85.12 0.503067484662577 0 noncoding CTGAGACCAATCTTGAATTATTTACTGTTGGAAATGCAGTGAAAAAGGAAGAATAAAAATAGGAAAGGCATTACAATAACTTTTATGATAAATATTTTAAAAGAAATCTTAGAAAGCTAAAGCATTAAAGCTCTGGGCTATACTCTTATTTGAGATGCCTGGATTGTAGCCAGCCAGGCTCCTCTGGCTATGGAATTCTCCAAACACGAATACTGGAGTCGGTTGCCATTCCCTTCTCCAGGACATCTTCCTGACCCAGGGATCAAACCCGGTCTCTCAAATTTCAGGCAGATTCTTTACTCTCTGAGCCGCCAGGGAAGCCTAGA TCONS_00003467 . 3' 437216 TCONS_00003467 . 3' 437541 EMBV3_04064 AAGACATCCATCAGTGTGCACTTCTAACAGATTGGACCCCTTCAAATCCTGAGCCAATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25532 AACCGCCCCGACTCTTCAGGGAAAAGGTCAGTGAAGTTTAACAAGGGCTACACTGCTCTT Gene GeneID:617177|LOC617177:XM_002696633:176_cdna Constitutive 0 NULL GeneID:617177 21 GENE LOC617177 NULL hypothetical LOC617177 EMBV3_06984 TGCAGAGAGAAACGAGCAGGGTGGGCCAAATGTAACCAAAAAGCTTGCCGGAGCAGTCTT Gene GeneID:511254|NRD1:XM_002686360:127_cdna Constitutive 0 NULL GeneID:511254 3 GENE NRD1 NULL nardilysin (N-arginine dibasic convertase) EMBV3_19967 CAAAGTCTGTGGGTTCCGGGGGGATTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACG Gene GeneID:100336625|LOC100336625:XM_002698291:1018_cdna Constitutive 0 NULL GeneID:100336625 25 GENE LOC100336625 NULL hypothetical protein LOC100336625 EMBV3_38552 GTAATTGTGTGGGCTGGTACCAACAGATCCCAGGATCGGCCCCCAAAACCCTCATCTATA Gene GeneID:100138815|LOC100138815:XM_002694662:198_cdna Constitutive 0 NULL GeneID:100138815 17 GENE LOC100138815 NULL similar to Ig lambda chain V-I region BL2 EMBV3_10336 TCCGGCCGCCCGCTTCCTCCTTGCCTGGAGCTTTCTCCTGTGCTTCTGGGGAGTATCTAG Variant GeneID:518313|KIAA1324L:NM_001046238:23_cdna 315^435 1 EMBV3_13061 GeneID:518313 4 GENE KIAA1324L MGC137390 UPF0577 protein KIAA1324-like EMBV3_21775 TGCGGCCAGAGCAGGTTTCCTGGACACTTTACAGACTTTGCTGGAGTTTCAAGCTGATGT Gene GeneID:505691|CDKN2C:NM_001101054:19_cdna Constitutive 0 NULL GeneID:505691 3 GENE CDKN2C NULL cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) EMBV3_22283 CTCTGGCTCGGTTTCCTTTCTTTGGTCTGATACTTCATGTATTTGAATATAGTTGAATTT Gene GeneID:512064|DIP2B:XM_002687272:141_cdna Constitutive 2 NULL GeneID:512064 5 GENE DIP2B NULL DIP2 disco-interacting protein 2 homolog B (Drosophila) EMBV3_38018 CACGAAAGTGACGATGCCCGCTGGGAAATACATGCATACACACACAACCTTGTATACCCA Gene GeneID:538447|PRKD3:XM_002691284:367_cdna Constitutive 0 NULL GeneID:538447 11 GENE PRKD3 NULL protein kinase D3 EMBV3_34116 AAAGAGCAGCTGCTCCGCCTCCTGATACAGGCCTTGTATGACCCCATCAACCCGGACAGG Variant GeneID:505862|TMEM143:NM_001037447:136_cdna 261^365 1 EMBV3_27777 GeneID:505862 18 GENE TMEM143 FLJ10922 MGC128619 transmembrane protein 143 EMBV3_13027 TGCAGGAGACAGGCAGTAAGAGTTAGGTCTGTAGCTGTGGAGGTAGGTCAGCGAGAAGTT Gene BVT0102_147424 + 1 EMBV3_19697 GK000008.2:59784219-59797488 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00231977 1 XLOC_141465 Coding TCONS_00231977 XLOC_141465 Coding Coding - 8:59784686-59785480 - TSS173481 794 1 TCONS_00231977_1 77 1 0 0.000359847769662244 0 0 0 0 0 0 0 0 0.000326465228748163 2.88310634887356e-06 0 0 5.92442858496004e-06 0 0 0 0 0 0 0 0 1.15542163402612e-05 0 0 0 0 0 0 0 XM_005210090.1 UNC13B PREDICTED: Bos taurus unc-13 homolog B (C. elegans) (UNC13B), 8e-20 102 100.00 0.0692695214105793 NM_172691.3 Fam214b Mus musculus family with sequence similarity 214, member B (Fam214b), transcript variant 2, mRNA. 7e-08 62.6 94.87 0.0478589420654912 0 coding 0 0 0 0 0.0844640591489102 0.823161844420431 0.0204791150499522 0.779099260476162 CAAAGTGATGGCTGCAGGTCGCCTGAGGGCCCACCCCGGACACGTGCGGCTTCTGTGATGACAGGTCTAAAGGGGCGGGGCCTCATCCCACAGTGTGCAGCCTGGGCTGACCAGATCCGGCCGGAGATGGGGAGCCAGAACCTGCGCCAAAGCGCTAGCTTGTGGGCGCCCGAACCTGGTTGGAGCCCTCCCAGGCTTTCGAGCTGGTGTGAGCTGCCTGCGGAACTTGAGCCTCTTAGTGAAGGCGTCTGGGTTAGCGCGCGTATTTGCCCTAATAGGGGAGGTCTGTAGGGTTTGCAAAGTAGTGCAAAGAACTTCAGAATTCTGTGAAAATGCGGGAATCTGGTTGGCGGGGGTCTCAAGTCTGTGAGGAGGAGCAGTTTCTGTAGCCTACGGTGTGCAGGAGACAGGCAGTAAGAGTTAGGTCTGTAGCTGTGGAGGTAGGTCAGCGAGAAGTTTGTGAATTTTATGAGCCAAAGTAGAGCCTTTGCTTTGTATAAGTGTCGACTGAACTATGTGACTGTTACACACGTTCTGTAATTTCATTAGCGCCTGAGTCTTCAACTTCCCGGGAGCCCCACGAGTTCCCAAGATATGTCCAGGGGAGGGCGATGCTTACGAGCTACCGGTAGATGGCAGCCCAGGTCCCTTGCAGAGCTGAGTGGCTCTGAGCCCAGAGCCTAGTAAGCTTCTCGATGGAGCCGGAGGTATTGATGGCTGTGTGATGGACTGGACCTGGTAAAGTTATCTCGAAGTCTCAGATTCTTTAGATCTCTGTGACTTCTTTCTGTGAG TCONS_00227773 TCONS_00227774 . 5' 469 TCONS_00227773 TCONS_00227774 . 5' 469 EMBV3_23445 ACCCCCCGCTCCCTACCCACTAGAGCAGTGAACAAATGAAAAACATCTTGCTGTTAACTC Gene GeneID:506971|RASGEF1B:NM_001083649:29_cdna Constitutive 0 NULL GeneID:506971 6 GENE RASGEF1B MGC139622 RasGEF domain family, member 1B EMBV3_15995 CATGGTGAAGCTTCATCATGAGATAAGAAAATTCTATATGAGCAATGAAACCATCTCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14288 CGGTTGGGTCGTCTGTACATAGGTAGGCCTGTGCGGTTTCTCCAGTGCTGAGTGTTGAAA Gene GeneID:506553|CAMSAP1:XM_002691656:391_cdna UTR3_Alt 2 NULL GeneID:506553 11 GENE CAMSAP1 NULL calmodulin regulated spectrin-associated protein 1 EMBV3_40542 TTCGCAGTGACTGAGAAGTGCTCTGATTTCTGCCAAGATGACCTGGCAGACGATGACATC Gene GeneID:514446|FLII:XM_002695867:352_cdna Constitutive 0 NULL GeneID:514446 19 GENE FLII NULL flightless I homolog (Drosophila) EMBV3_16150 CCCTTGTCCTCACCAGAGAATACTGTGAAGCAGGGATTTGGGCTTCGGTTCCTTATCTAC Gene BVT0102_225769 - 0 NULL GK000021.2:33840717-33843754 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119219 TCONS_00119226 TCONS_00119222 TCONS_00119225 TCONS_00119221 TCONS_00119223 TCONS_00119215 TCONS_00119213 TCONS_00119220 TCONS_00119217 TCONS_00119224 TCONS_00119216 1 XLOC_072838 Coding TCONS_00119224 XLOC_072838 Coding Coding SIN3A 21:33816947-33843325 j TSS89335 4341 1 TCONS_00119224_3 573 11 0.835841831899003 0.00585519366465333 0.00423299103668339 0.00988583912424846 0.00491960102725309 0.00268095186192074 0.00223173403802565 0.00339257327145701 0.0075869770103328 0.0131517848086552 8.95187400066978e-44 1.3529612457999e-64 0.000188315074156548 0.000396053135751059 0.000842979794843768 0.000719550463055872 2.70721715588414e-49 0 1.96534723180253e-65 0.0374797945161168 0.0304300792454721 0.00337391388882117 7.7522630448532e-81 3.34516037583891e-67 2.27519623416474e-61 0.0194485665815226 0.0302029543902205 0.0084226551624915 2.22232058693226e-32 1.88977089141026e-31 7.21680291866975e-33 XM_875451.6 SIN3A PREDICTED: Bos taurus SIN3 transcription regulator homolog A (yeast) (SIN3A), transcript variant 6, mRNA. 0.0 6798 100.00 0.868002764340014 NM_001145358.1 SIN3A Homo sapiens SIN3 transcription regulator family member A (SIN3A), 0.0 4688 87.81 0.856715042616909 TCONS_00119224_3 sp|Q96ST3|SIN3A_HUMAN SIN3A_HUMAN Paired amphipathic helix protein Sin3a; 0.0 1197 99.13 0.99825479930192 0 coding 0 0 0 0 0.0387076597381921 0.805313673880475 -0.0522557455629844 0.316577001119192 CAACGTTTTAGAGCTTCAGCTTCATCATCAGTCCTTTCACTTGATGTAGTTTTAGAGACCAATCTGGCAACTATCCGGGTTCTGGAAGCAATACAAAAGAAACTTTCCCGCTTGTCTGCTGAAGAACAAGCTAAATTTCGCTTGGACAACACCCTCGGGGGCACATCGGAAGTCATCCACCGAAAAGCACTCCAAAGGATATATGCTGACAAAGCAGCTGACATCATTGATGGTCTGAGGAAGAACCCTTCCATTGCCGTCCCAATTGTCCTTAAAAGGTTGAAGATGAAAGAGGAAGAATGGCGAGAAGCTCAGAGAGGCTTTAACAAGGTGTGGAGAGAGCAAAATGAGAAATACTACTTGAAATCTCTGGACCACCAAGGCATCAACTTTAAACAAAACGACACCAAGGTCCTGAGGTCCAAGAGCTTACTCAATGAGATTGAGAGTATCTATGATGAGAGGCAAGAGCAGGCTACGGAAGAAAACGCTGGTGTACCTGTTGGCCCACACCTCTCACTTGCCTATGAAGACAAACAGATTCTGGAAGATGCTGCTGCTCTGATTATCCACCACGTGAAGAGGCAGACAGGCATTCAGAAGGAAGACAAATACAAAATCAAGCAAATCATGCATCATTTTATTCCAGATCTGCTCTTTGCTCAGAGAGGTGATCTCTCAGATGTGGAGGAAGAGGAAGAAGAAGAGATGGATGTAGATGAAGCCACAGGGGCGGCTAAGAAGCACAATGGTGTTGGGGGCAGTCCCCCTAAGTCCAAGCTACTATTTAGTAACACAGCAGCTCAGAAGTTAAGAGGGATGGATGAAGTGTACAACCTCTTCTATGTTAATAATAACTGGTATATCTTTATGCGGCTGCACCAGATACTCTGCTTGAGGCTGCTGCGGATTTGTTCCCAAGCTGAACGGCAAATTGAAGAAGAAAACCGAGAAAGAGAGTGGGAACGGGAAGTGCTGGGCATCAAGCGAGACAAGAGTGACAGCCCTGCCATCCAGCTGCGTCTCAAAGAACCTATGGATGTTGATGTAGAAGATTATTACCCAGCTTTCCTGGACATGGTGCGGAGCCTGCTGGATGGCAACATAGACTCGTCCCAGTACGAAGATTCGCTGAGAGAGATGTTCACCATTCATGCCTACATTGCCTTTACCATGGACAAACTCATCCAGAGCATTGTCAGACAGCTGCAGCATATCGTGAGTGATGAGATCTGTGTACAAGTGACGGACCTATACCTGGCAGAAAACAATAATGGGGCCACAGGAGGCCAGCTGAACACACAGACGTCAAGGAGCCTCCTGGAGTCAACATATCAGCGGAAAGCTGAGCAGCTCATGTCAGATGAAAATTGCTTTAAGCTTATGTTCATTCAGAGCCAAGGCCAGGTTCAGCTGACAATTGAGCTTCTGGACACAGAAGAGGAGAACTCGGATGATCCTGTAGAAGCAGAGCGCTGGTCAGACTACGTGGAGCGATACATGAATTCTGATACTACCTCTCCTGAGCTTCGTGAGCATCTGGCACGGAAACCAGTATTTCTCCCACGGAATCTGCGGCGGATCCGGAAGTGTCAGCGTGGTCGAGAGCAGCAGGAAAAGGAAGGGAAGGAAGGAAACAGCAAGAAGACCATGGAGAATGCAGATAGCCTGGATAAACTGGAGTGTAGATTCAAGCTGAATTCCTACAAGATGGTATATGTGATCAAGTCAGAGGACTACATGTATCGGAGGACCGCCTTGCTGCGGGCTCATCAGTCCCATGAGCGTGTAAGCAAGCGGCTACATCAGAGGTTCCAGGCCTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCGTGAAATGGCAGCGGAGACCAGCAAGTGGCTTATGGGTGAGGGGCTGGAGGGCCTGGTGCCCTGCACCACCACCTGTGACACAGAGACCCTGCACTTTGTGAGCATTAACAAGTACCGTGTCAAATATGGCACAGTGTTCAAAACCCCGTAACTGCAAAGCCAGAGCAGATAACTGGAGGGGGGTGGTGTGTGTGGGGGGGCGCGTGTACTCGCACACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGACATGGCCACCTGATCTGTGCGTGGCTGGTGCAACCTGGCACCAAGTGGGCTACATATAAGGAACGTGTGATCCCTTACAAAGCCGGAGTTGGAACTTTTCCCAGGGGTTTTGGGTATTAGCCTGCCCTGGAGGGGAGGAAACCCACGCAAGCACAGGGACACGCAGCTTGCACACACCAGCAGAGCGGAGACTGGAGCCTTCTGGGGCGACCTTCAGTGAGGGAACCGGATGCTGTTCACACCTGGACTGGATGGGCGAGCATCGACTGACAGACTTGAGGAGTCAACGCTTAGATGGATTGTAACTCTGATGGTCACTGCTCCTTTCCTCTTCCCCCCAAAAAGGAAAAAAAACTGGATTGGATTTTTTCTCCTGGTCACTTGAGCACATCTAGATCACCCATTAGGTTTTCTCTGGGACCTGCAGTTTGGCTTTGGGATTGATCATCTTGTGGATTTGATTCCTGATGAAAGCTTGCTGCCCACCCTTTCTTCTCTCCTCTGGTTCTCAGCCTCAACAAATTCAAATCAGTCGTCCTTTTTAGCTCCCGTGGAACTGTTTTGTACCTGCTTCTTTACTAGTCTACCCTAGTGCCATCCACCAGCTTTACTCACACACACACACAAACACAATTTTAACTTGGTTTTTCTTTTTTTTTTTTTTTTGTAAATAATGTACATACTGTCAATTTTTTATTAAAAGAAATATGCTTTGATGTGCTAGCATAACTGCTCTAGCTTCTTGTGTACCATAGTTCTATGTGGCTTCAGGTTTAGTACCTGTGAACAGGTGTACAAGACATTTATTACACTTTTTACCAAAGGGAGTTACCGTTGTAGTACTTTTGTGTAAAACTTGTCTTCCTTCTTGCCCCAACTTTTTTTTTTTTTTTTTTGTAAATAAATAAAGCTTGGTTCTTAAGGAATGAACTCTCAACACAAGTCCCTTGTCCTCACCAGAGAATACTGTGAAGCAGGGATTTGGGCTTCGGTTCCTTATCTACATACAGTACAAAAACAGGATTTTGCTTTAAATAGTTAGCAGTCAGTTGTACTTGTCCCAAATCAAAATATCTCAGATTTTAAAAACAGAATTATTCATTCTTTTGGTACATATTCTACCCCCTTCAGCTGTTTGGAAATATTTTATATATGGGTATATTGTGCAGCTGTATAGTTTGTGCTTCTCTATTTTTTACCTTTATTGGAAATGGGAGTGAACAGCTTAAATACCAAACCAGTGTTTGAAAGAAGTGTGTACACAGTGTGTGGTATAAATGGGGTTAGGAGGGAGAAGACTTGATACATTAGCAACTGCAAATGGAATATATATGTATATATATTTTTTTAATTACATAAATTTAAAGCAGCAGATATTTAAACATGAGTGATTAGGATTTTTGTATGTGGGCAGCCTGGCTTTTCTGAACAAACACCAACTGAGCCCCTCCCAGGACTTTGGTGAATTTTTCTCCAGCAACCATTACTCTAGTCAAAGTAAACAACAGTGTTCCTGTGTGGTTTTGTTTGCTTTTTAATTAAAAATCCCTAATATCACCACCACAAAACCAAGTTTTTTTTGCTCTGGACTTTCCTTATGAATGGTAAGCTTATCTGACTTTTAGACTTTTGTTGGGGGGCGAGCATTGGAGGGATGGGACAACTATAGGAGACTCAGCTCACAGCCAGGATTTACAAACAGCATTTTTATGTCTCCTGCCTTCTGACATCTGAGCTCCAAGCTCGGCTCAGCCTGTCTTAGAGCAGCAAGTTATATTTTAAGTCGTGTTTGGTATTCTGTACTTAAGTCACTTTTCCCTATGATTTGCATTTGAAGTGTTGTAAACTTGGTCAGTATTTCTATTAAAATATCAGGGGTCGGTCATGTTGTGTATATACTTTTCTTCCTAATGATTTTATAGAGAAGATTTCATCCCATTCCCAGGAGGGAGGTGGGGGAAAGTTGCCAATAGACCACCAGAGTAACATGAGGGTGAAACTGGAGGTGTTTCTGGTATTATGGCGTCTCTGAACTCATCAGTCCCTGTAGAGAAATGCATTATTCTGTTACGCTCATGAATTCTATGTCTGATCTGCCATCTCAAAGTCGTAAGCTTCTGGCGATGGGCAGCAATTAGCCATATACATAAAATAGAACACGTAGTAGAGGAAGCTGAGGTTACTGGGGTATAAAGCACTCCCTATTTAACACATGTC EMBV3_27877 CGCCTGGTATCGGGAGGTGCCGAACACTGTGCATTTATTCCAGCTAGACATCTCTGTGAA Gene GeneID:327670|NDUFA6:NM_175791:135_cdna Constitutive 0 NULL GeneID:327670 5 GENE NDUFA6 B14 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa EMBV3_10498 TCAGACTTTGGCCAGCTAACCAGGGCTCTCTGTTCAATCCCCGCACCAAGTTTTTCTTGG Gene BVT0102_172866 - 1 EMBV3_15403 GK000008.2:63729125-63772479 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227967 TCONS_00227966 TCONS_00227965 1 XLOC_138379 Coding TCONS_00227967 XLOC_138379 Coding Coding TBC1D2 8:63768851-63814993 j TSS170078 6743 1 TCONS_00227967_5 857 0.115823817292007 13 0.854142736394963 7.36139092586454e-07 1.08650414538606e-07 9.28046940276285e-08 2.47156433748058e-07 1.31751965890059e-06 2.50678750363567e-09 8.606632360888e-05 1.2679703363717e-05 0.000135595357632397 2.727977839316e-05 1.78843930080177e-12 2.33706427628927e-13 1.03932100917855e-08 4.17514531526065e-11 1.07768158948324e-12 1.01312180133153e-08 1.76868946280827e-20 2.9268007728254e-09 2.53249103940401e-05 3.20640291143138e-07 2.9354999678806e-08 8.22700302047584e-09 2.62010344131087e-08 2.20767309809761e-08 0.000746156394894721 5.17983490719691e-07 0.000599037671507155 8.44504043299211e-13 1.54966491076776e-08 4.03490197408013e-12 NM_001101981.1 TBC1D2 Bos taurus TBC1 domain family, member 2 (TBC1D2), mRNA. 0.0 5606 99.87 0.461812249740472 NM_001267571.1 TBC1D2 Homo sapiens TBC1 domain family, member 2 (TBC1D2), transcript 0.0 3267 82.57 0.460477532255673 TCONS_00227967_5 sp|A6QP29|TBD2A_BOVIN TBD2A_BOVIN TBC1 domain family member 2A; 0.0 1761 100.00 0.998833138856476 2 coding 0 0 1 1 -0.104556842130539 0.56449456689099 0.014280722576115 0.790537393916262 CACTAACCTCCAGTCCCTCTGCGATGGAGGGCGCGCAGGAGAGCCCCGCGGAGTCTGGTTCCTCCGTCCCGTGGTCCGAAGAGCCTGCTGGCTCGGCCAAGGTTCCCGAGGTGTCGCTTTCGGAGGAGTCGGAGGGCTGTACCCGGCCCCTGGAGGCGACCCCCCCAAAGCTTTGTGGATATTTAAGTAAGTTTGGTGGCAAGGGGCCCATCCGGGGCTGGAAATCCCGCTGGTTCTTCTTCGACGAGAGGAAATGTCACCTGTATTATTCGCGGACCGCGCAGGATGCGAATCCGTTGGACAGCATCGACCTCTCCAGTGCGGTGTTTGATTGCAAGGCGGACGCCGAGGAGGGGACTTTCGAAATCAAGACTCCCAACAGGATAATTACCTTGAAGGCTGCCACCAAGCAAGCGATGCTGTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGAGTTCCACAACAGCCTGCCTGCACTTCCTGCTGCCCACGACGCTGCCCTGGCTGGGAATGGGCCTGCCCTGCGCCTTGAGCTAGAGCAAGAGGAGGAGGAGGAGGAGGCGTTCCTGTGTCCCGTGAAAACGCCCACTGATCTTGTGGGTGTGGCAGCTGCCTGGCAGCCAGTCCATGCCAGGCCTTTGGCCCTTCAGAATATTTCCCTCAAGCACCTGGGAACTGAAATACAAAACACAATGTGTAACATCCGGGGCAACAAGCAGACCCAAGGAGCAAACCACAGACCCCCCGGAGAAGATTCTCCACTGATCGAGGAGACGCAGAGAGAGGAGCAGCCCTCTCCCCCTGGCCCTGGCGCCCCAGGGAAGGATCCAGCAAATTCTCTGAAGTCCTCTCTGACCACCAGTCTCATTCGGAAAGCCAAAAGCCAGAGCAACACCTTCCCGCTCTTCAGTGAAGGGCTCATGCGGAACCGAACTGCCCAGGAGAAAGTACTGGCCTTGGAGCAGCAGGTTCTGATGCTCACCAAGGAGCTAAAGGCTCAGAAGGAGCTGGTGAAGATCCTGCACAAGGCGCTAGAGGCAGCCCAGCAGGAGAAGAGGGTGTCCAGCGCATACCTGGCAGCGGCCCAGGACAAGGACCGGCTGGAGCTGGTGCGTCACAAAGTGCGGCAGATTGCGGAGCTGGGCCGGCGGGTGGAGGCCCTGGAGCGGGAGCGGGAGAGCCTGGCGCAGACAGCAAGCCTGCAGGAGCAGGAAATACGGGAACTGCAGCAGCACGTGCAGCTGCTCCTGGACAAGAATCAGGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGTCACCCAGGACTTCATGAAGGCCCCAGAGGAGGCTGACAGGGACTTCCTGAGCCAACAGGAGAAGATGGAGCACCTAAAGGATGACATGGAAGCATACCGGACCCAGAACCGCTTTCTCAACTCTGAGATCCACCAGGTCACAAAAATCTGGAGGAAAGTGGCTGAGAAGGAGAAGGCCCTCCTGATGAAGTGCGCCTACCTCCAAGCCCAGAACTGTCAGGTGGAGAGCAAGTACCTGGCAGGGCTGCGGAGGCTGCAGGAGGCCTTGGGGGTGGAGGCCGGCGAGTGCTCGGAGCTCCTGAGGCAGCTCATCCAGGAGGCACTGCAGTGGGAAGCCAGCGAGGCCTCGGCCGACAGCGTCGTGCTCAGCCCCAGCACCATCAGTGAGTATGACGAGTACGGCTTCCTGACGGTGCCCAACTACGAGGTGGAGGACCTGAGGCTGCTGGCCAAGATCCAGGCACTGGAAGTGCACTCCCACCACCTGCTGGCCCATGAGGCCGTGGAGCGGCCACTGCGGGAGCGCTGGGCCACCCTGGGCGAGCTGGCCCCCTCGGCAGAACTGAAGCAGCTGCTGCGGGCGGGCGTGCCCCACGAGCACCGGCCGCGTGTTTGGAGGTGGCTGATCCGCCTCCGAGTCCAGCACCTGCAGGCCCCCGGCTGCTACCAGGCGCTGCTGAGCCGGGGCCAGGCCTGCAAGCACTCTGCTGCCCGCCAGATTGAGCTGGACCTGAACCGGACCTTCCCCAATAACAAGCACTTCACCTGTCCCACCTCCAGCTTCCCTGACAAGCTCCGCCGGGTGCTGCTGGCCTTCTCCTGGCAGAACCCCACCATTGGCTACTGCCAGGGCCTAAACAGACTGGCGGCCATCGCTCTGCTGGTCCTGGATGAGGAGGAGAGTGCCTTCTGGTGTCTGGTGGCCATTGTGGAGACCATCATGCCAGCTGACTACTACAGCAAGACGCTCTTGGCATCCCAGGTGGACCAGCGGGTGCTACAGGACCTTCTCTTGGAGAAGCTGCCCAGGCTGATGGCCCACCTGGGACAGCGCCACGTGGACCTATCCTTCATCACCTTCAACTGGTTCCTTGTGGTCTTTGCAGACAGTCTCATCAGCAACATCCTCCTCCAGGTCTGGGACGCCTTCCTCTACGAGGGCATCAAGGTGGTGTTCCGCTATGCCCTGGCCATCTTCAAGTACAACGAGGAGGCACTCCTGAGGCTACAGGATAGCCTGGAAATCTACCAGTACCTGCATTTCTTCACCAAGACCATCTGTGACAGCCGCTGATGCACATTGCCTTCAATGACATGAACCCCTTTCCCATGAAACAGCTGCGCCAGCTGCGGGCAGCCCACCGGGAGCGGCTGGAGGCTGAGCTGAACGAACTGGAGCAGCTCAAGGCCGAGTACCTGGAGACCCGGGCAGCCCAGGGCCCCGCGGTGCCCGAGGGTTCCCCGAGTGAGGATGAGGGGGAGGCAGAGCCCTGACATGGCTGCCTGCCCACCCCAAGCCCTTTCTCACCCTGGGCTGGCAGGCCCAGAGAAGGACGGCCATGCAGCGATATGTGACCCTCAAGTCCCTTCTCCTCTGTGGGACTCAGTCTCCCCATTGAAACGTTGGCTTCTGAAGCCACTGATTGGGTTTTCTCCTCATGAGCACCCCTTCTCACTTCCTCCGCAGAGCACTGTAGCACCCAGACAAGCAAGAGTGCTGTCTTTATAGGGTTAACCTTGAACATTCTCTAAGTTTTATCTGTGTATAACAGTGTAAATACTGGAAATAGTTCACAAGCTCTGGAACCTAAACAGTTCTCAGTAACTGGTTGTTCCTGGGTGGGCCTGGGGCTCCAGGATGTCGCACCACCAGGGCCTTCTCAGCCTAGGACGTCTCTGGCTGCTGTTTCTCATGGTGTCTCTGCAGGGCCAGTCCTGGTTCCCGGAGGAGCTGAGTCCATATGCATTTACAGCTCCCGTCTTTGTGGGCGACAGCGTCTCTCAAATACTGGTTGGCCTTTTGATCCAGGCCCAGCTCCCACCTACCCGTTTCCTGGGCCTTGCACCTACCCTCTCCTTTCTCCTCACAGCCCATCTTGGGTGTTGGGGGGTTTCTAGGGAAACCCCTGTCCACCACCAAGAAAAACTTGGTGCGGGGATTGAACAGAGAGCCCTGGTTAGCTGGCCAAAGTCTGATCTCCCACCACCAACTTCATAGTCAGGGGCAAGAAGGGTCACCTCTTTGAAAACTGGGTGGTTGGGAGAGAGAGAAAAAGGTGGTGAGACAGACAGAGCCTGCAGCCAGGTCAGGGCTAGCTTGTGCAGAACTCAGCTCCAGTTCTTCTGGGCTCTTCCAGGCCCTTCCTCAGCAAACAGGCTTCCCCCATCGCCCTCCGTGCAGGGGGTCGAGGCTGCACAAGTGATGTGAGCAGCTCATTCCTCAGCAAAGCCTATGACTGTCTGCCAGACTAGCCTTGGGCTCAGCAATCTTTGCTATGAGGGACTAGGGTAGGGCTTCTCACAGAAAAGCCTCCTGCTCTGATCCAAGTTTCTTTTCGAGGCTTGGGAGGGAGGCCACACCCATTGCTGGGGACAAGGGACAGGCCCTTTTCTCACCCACCAGCGTGAACTTGGCGGGGTTGGCGCACCAGACCCCTTGTTCCCTCCCATCACCACCCCCACCAGCCCCAGGGAGAGGACCCTCAGGGTTCCTTTCCTCCCACATTCATCAGGGCGGCTGTGAACACTACACCAAGGCTTGATGGCCTTTTCATATTTGCCAAACTTATTCGTCTGCTGAGGTCCTTTCACCACCAAACAGTAACTGAAGCATGATGGTGGTCTGAGGGCAGCCTGGGGTGGGGGGGTCCTGGCTGCACCCCCAACAGGTTGCAGGCTGTATCCCTCAGGGCCATCACCAGGAAGACTGGGCGGTCTGGCCTCCTGGAACGCCGGGAGGGTTAAAGGAGATGACGCTGGTGCTGCGTCTGCTTGCCCAGCAGAGTGAAGCACACAGCCTTGGCAGTGAATGGCCTTTTCATAAAGAAGGTATCACCAGGAAGGCCCTGAGGGCCAGAAAAGGCCCCCGGTTCCAGCAGAGACTGGGTCCAGCTGGTCCCTCTGACTCCAGCCTTTAAAACCAGATTCCCTCCTTGGCAAAAATACAGCACGTGACCCCAGCTCAGACCAGGGCTGCTGGACAACGCACCCCCACCCCTCGCCTCCCGTCTGCCACCCGCCTCTGCTCCCACCTCCCTTTCCTCCTTCCCTCATCCTTTGTCTTCACTTGTCTTCCCTCTGCTTCTCTCCCCGCCCGCCCCCACCACACACACACCACGCCCAGGCAAAGAAGTTCTGCCCAAAGTTGAATGTCTGTCCCCTCCTCCTCCTTCACTGGGAGGGGTGGTATTATGCAGCTGACCCAGCACTGTGTCACCTCTGGTTCCTACCTGGCTGCACCACAGTACCACCTGGGTGCTGGGTCAGAGCCTGTTGTGGGGCATGGGTGTTACGGTACAGCGACAGGGTTGGGGACCACAGGCAACGAGGACTGACTAGTGGGGCCTCCGGCCTTGTATCGGGGAGCTGGAGCGAGAGCCAGGAATGTGAACTGCCTGTCCTAGAGCACCCACTCATCCGACAGAGCTCGGTTTACAGATGAGGAGACGGCTCAGAGAGGTTAGCCAACTTGCCCAAAGTCACAAAAGCCACAAGTGTTTAAGCCATGCTTAAGCCTTAGAGGCTGCTAACTGGAAAATCCAGGGAGAGCTCCTCCAAGCTAGAACACCTCCCCCAAGAACCCAGGAGAAAGGGCAAGCTTGGCCTATGGCCCCCTGAGCCGTGAGGGCGAGTGGGGATACCCCAGGCAAAGGAAAATGGGAGGAAGAACCATCTACCTGACAAGGGAGGCTGTAGCAGGGACTGGGGTGGGGGTAGGGGGGCCGAACTCCGAGAATCTCTGGGGCGGCTGCTGCTCCTTGGGAGCCTGCCCACCCTCCCTCAGCTCTTCCTGAAAGGCATTTGGGGCCCAGCCCCAGTGTCAGGTTCCTGGCCCCGCACCACAGCTGTCGCCCCCACCATCCCCAGGGATTGTTGCCTTCCTGGCTGGAGGATCTGATCCCTCACAGCCCCACCTCCCTACCCCAGGGGTGGGCCCCCTAGCTCAGAGCATCCCTCTCCCAGACACGAGGCCCCCAGCAATCAGGACACGCTCCATTCTACAGGTGAGGGAAAGGAGTTACCCAGGGAACCTTCCTGGGCAATATCCTAAGAATAAAGGGGCTCCTCAAAACAGCAGGGGGCCACTGTGGAAGATCTGAACCCTAAAGTGGGAGATACATGCTAACTTCTACAGGATGCCTGTGTTCAGGGTGCTCTCCCGCATGTTCAGAACCTCCCCCTAACCCTGATCCTCCCAGGCACAGGTCCCCTCCTTCCTCAGCTCAACCTGCCATGAGCACAGGACCACATGGTACAGAAAGCTCCATGCTGGGCAGATAGGGGAGAACTTGCCACTTTCCCTCACACACATGCAAAAACAGGTTCTTGTCACCCAGAAGACATTTACCTACATGTGGCAGGTTAAATTTTAAAAGAAATTTTGGCCATACCGCACAACATATAGGATCTTAGTTCCCCAACCACCGGTTGAAACTTGCACCCTCTGCCTTCAAAGTACACAGTCTTAACCACTGGACCACCAGCAAAGTCCCAACACACAGCAAATTAAACAAAGGCCATGCTGACACAGGAAGGTGTTGGATTTCTGGCCTATCTCAATCAGCAATAAGGCCCAATAGAAGGTCCTGGCAGATGGACCCAACTTTGGGACCAGACCTATTGTGTGTTTCCTAGCTAGAGACCCCTGGATAGGTCATTCCCGTTCTGGCCTCAGTTTCCCCATGTGTGCAATTCAGATAGTCAGCCGGTGTTGTTGATGTTCAGTTGCCCAGTCATGTCCGACTCTTTGCTACACCATGGACTGCACCATGCCAGGCCTCCCTGTCCCTCACAAGTTCACATCTATTGCATCCATGATGCCATCCAGCCAGCTATCTTATCCTCTAACACCCTCTCCTTCTGCCCTCAGTCTTTCCCAGCATCAGGGGCTTTTCCAATGAGTCAGCTGTTCACATCAGATGACCAAAATACTGGAGCCTCAGCTTCAGCATCAGTCCTTTCTAGCGAGTATTCAGGGTTGATTTCCCTTAAGATTGACTGGTTTGCTCTCCTCGCTGCCCAAGGAACTCTCAGGAGTCTTCTCCAGCACCACAATTCGAAGCCATCAATTCTTTGGCGCTCTGCCTTCTTCACAGTTCAGCTCTCACAACTGTACGTGACTACTGGGCAGGTAGTCTTCATCAAATGGATCAGCGTTACGGGGATGGAAGGGGAAGGGGGATAAGCACACCTACACAGCATCTCTAGGAAGAGTCCTAGG EMBV3_09951 TGGCACAATCTACCAGAGCATGCCCAAGACTGGCTTGAGATCACATTTTCTGGTCAGTTC Gene GeneID:100295484|LOC100295484:XM_002699921:40_cdna Constitutive 0 NULL GeneID:100295484 X GENE LOC100295484 NULL hypothetical protein LOC100295484 EMBV3_06517 GTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTTGCCGTCCTCCAATGGATACCGT Gene BVT0102_127908 + 0 NULL GK000014.2:26941727-27637548 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00117923 TCONS_00118040 TCONS_00210913 TCONS_00226167 TCONS_00219592 TCONS_00040258 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00174808 TCONS_00174809 TCONS_00132066 TCONS_00174807 TCONS_00232829 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00078426 TCONS_00207934 TCONS_00174805 TCONS_00018386 TCONS_00171428 TCONS_00206300 TCONS_00175564 TCONS_00207933 TCONS_00242416 TCONS_00205125 TCONS_00174806 TCONS_00118487 TCONS_00056149 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00242415 TCONS_00001866 TCONS_00110426 TCONS_00206299 TCONS_00246741 TCONS_00001865 33 XLOC_105290 XLOC_072089 XLOC_072206 XLOC_129423 XLOC_137940 XLOC_132911 XLOC_024074 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_126448 XLOC_009243 XLOC_103815 XLOC_124877 XLOC_105345 XLOC_149080 XLOC_124587 XLOC_072644 XLOC_033952 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_149079 XLOC_066330 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_29727 CACAGTCAGCGAGTCCAGTATATTCACAAGGCTATTGTGTCTCCCAGATCCTCTGCTGAG Gene GeneID:100141209|BOSTAUV1R417:XM_002695272:25_cdna Constitutive 0 NULL GeneID:100141209 18 GENE BOSTAUV1R417 NULL vomeronasal 1 receptor bosTauV1R417 EMBV3_34245 CAGAGGAGATCAGTGGTCCCTTGACCTCAGCCAATAAGATCACACTGGTGTCCAGTGGAA Gene GeneID:532573|FLOT1:NM_001076887:153_cdna Constitutive 1 NULL GeneID:532573 23 GENE FLOT1 MGC143379 flotillin 1 EMBV3_09450 CACAGTCATCATGTCACAAAGGGTGTGTAAAGTGCTGGTGGCAATCCCCTATGTCTATAG Gene GeneID:785470|LOC785470:XM_002693740:487_cdna Constitutive 0 NULL GeneID:785470 15 GENE LOC785470 NULL similar to cOR8V11 olfactory receptor family 8 subfamily V-like EMBV3_06412 TCGGCCGGTAAAAGTCAATGTCTACCAGAACCACTTCACATAGACGTCTCAGTGCATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04843 GGCAAATGGCCAGCCACGGAAGGCTTTTTACCTGACTGCTAGTTGAAAATCACACTATAG Gene BVT0102_330403 + 0 NULL GK000010.2:26632355-26667690 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020117 1 XLOC_010795 NonCoding TCONS_00020117 XLOC_010795 NonCoding NonCoding - 10:26655880-26657823 - TSS14007 1943 1 TCONS_00020117_1 71 0.142048378795677 1 0 0 4.65444632390276e-05 0 0 0 0 0 0 0 0 4.47704344261375e-05 0 1.47672770812355e-06 0.000152522745281948 0 0.000163118307067708 0.000487046672681909 0.00107181892147184 0 0 0 7.63836115232168e-06 9.44317743088903e-05 0.000526320851087457 0 0 1.80930850397708e-05 4.94347522974799e-05 3.99761738574309e-05 0 0 noncoding 0 0 0 0 -0.0404688895601941 0.83222849663685 0.063386565431956 0.289623345374761 TAGGTAAGAAATATTTTAGATGCTGGACATCCATAAAGAATGGCAGAATGGCAGAAGATATTCAGAGTTACCCTTACCATATTTCCATGTTTCTTTTTTAAACACTGGTGATTCCTATCTATTTGTGAAGGATAGAGGCAATCTGGGGGGGCAAGCATTCAAGGAAACCCAATGGCTTTCTTCTGTCTCCCCAGATTCAAAATCTTGCAGGTCTATCAGTGGATGTCCAGAGTGAGAACCTTCCCACTCTGAAACAAACATATCACAAACAACCACTGCACCAAACATCAAGTTTATTCGTTGATGGCAGTTAAATTATTTCCATACTTTGTTTGATAGAGTGGGTGGGATACTAACAATGGTAGAAGCTCTACCTTATTATTTAGAGGGAGCAGTGGAGATTAAAACTGTGAACTGGAATTAACCCGAGACAGTTTTTGAAGGGTAAAAAGAACACTGGATAGACCTAGAACATGTCAGGCTACACATAAAGTCATACTAAATTCCAACTAATCTCTTATTATGAAATTACAACTAAAGTTCAAGTAGAAATAGCTCAAAATAAAATAGGAAAAGGAAAGACTAAGGCTAAAATCAAACAGCTGGCTGACATTCATTTTTAAAAAATGAATAAAAGAGAGAAGGGAAAGAGAACAAGAAAAAATAGAGATTTGCAAGGGAGCTAAAGTAAACCTTCTGAATGAACATATTTAGGATGGAGTGAAAATGAAAACCAGTGGGGGTGGAGGGGAAGGGCTCTCTGACCCCAAAACAGGAGAACAAAGACAGATTAATCCCAAACAATATTAAATCTATTTTAGGCCAAAGCTACAACTCTGGAAAAAAGATTGAAAACAGGAAATTTTACATTTTTATTAAAATCCAAATTTACAATAACAGGAAAGCAAGGCAGATAGCCAGTATTTATTCAAAAGGTGTCCCTTAGGAACAAAATGTAATTATGAAAACAGAGGCCTATTTACAAGGAAAAGAGCAATGCAGATCTAAGCCAGATCAAATTTAGATGCAAGGCACAGCAAGGAAGAAACAGTTTCATTCTCTTTCACTTTCTTGTTTTAAAGGGACATGTACTCCTAATACTAATCAACAAGCAGGCTGGGAAATAGCTAAAAACAAACAAACAAAATCCAAGCATATTCTTCCTTAAGTTCTAAAAAATTTGAGATGACAGACATGTGTTCTTGACAGCATTGACTAATTCATGAAGCAAGCACACTAATTTACTAAAGGGCAAAGATCTTCAAGATATATTAAGATGAAATAAAATAGCAAAGTGCAGAACAATACAAATAACATGCTAGCTTCAGTGTATTATAATAATAGGAGAAAAAAATTGTATTTGTATTTTTTATAAATGCTGGAAGAATATACAAGAAGCTAATAAAAGTGACTCCTAGTGGGATAGGGAAGGAAGGGCAGATGGAGGACAGAACTGAGGTGAATATTTTCGCTGTATACATTTTTTTTTTGCTTAACTTTTTAGCTATGTGATTATATCACCTATTCAAATTTTAATCTAAAAGAAGGAGAAAACTAATTTGAATTAACTGTACATTTTCATTTCTAAATTTCTTACATTCTTGCCTTTATGTTTCATTTTATAACAACATTTTCTTTCAAACACTACAAAAGACCTCAACCAGATTAAAAATTAAATATGTCACACCACCCAACTAATTTGAGGTGAAATTAATTCTACCATCAAAAAAGCCACCTTGGTTCTACTTAGGCTTTAGTCTATGAAAATATTTACTATAGTGTGATTTTCAACTAGCAGTCAGGTAAAAAGCCTTCCGTGGCTGGCCATTTGCCTAGAAAACAAGATTCTTACTGCTCAGCCTGAAATCAGAGCCCTAAACAATTTAACCTCTCTCCACCTTATCTCCAAGTGCTCCTTCTCATGATTTCTTCAATTTTACCAT TCONS_00016538 TCONS_00016539 TCONS_00016540 TCONS_00016541 TCONS_00016542 . 3' 5310 TCONS_00016538 TCONS_00016539 TCONS_00016540 TCONS_00016541 TCONS_00016542 . 3' 7252 EMBV3_34583 CGCCATCCTATGTGCGGTTGAGTTCTTTCCTCACCATGTCTTCTCACAAGACTTTCAGGA Gene GeneID:767908|RPL39:NM_001105455:32_cdna Constitutive 0 NULL GeneID:767908 X GENE RPL39 MGC127980 MGC179345 ribosomal protein L39 EMBV3_30044 ACTCATGGAGATACAAGAGCATTGGAACTGAATCAGAAGTTGTCCTCAGAATAACAGTGC Gene GeneID:534095|TTC37:XM_002689395:20_cdna Constitutive 0 NULL GeneID:534095 7 GENE TTC37 NULL tetratricopeptide repeat domain 37 EMBV3_41993 TCATGAGAACGAACTGCCCCAGGAGTGGGAGAACAACAAAGATGCCCTTCTCACCTACCT Gene GeneID:532219|CPXM1:NM_001015642:1186_cdna Constitutive 0 NULL GeneID:532219 13 GENE CPXM1 CPXM carboxypeptidase X (M14 family), member 1 EMBV3_33700 GTACAACCATCCACTGACATCTGAATTTATACCTGTTGGACTGAGTGCACCCAAACACTC Gene BVT0102_197743 + 0 NULL GK000026.2:24225838-24226658 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150606 1 XLOC_091909 Coding TCONS_00150606 XLOC_091909 Coding Coding TAF5 26:24211947-24226667 = TSS112767 3245 1 TCONS_00150606_5 800 11 0.780283986683878 0.018523877953003 0.0171396254872771 0.0126313789769081 0.00976387343716414 0.0141075765602334 0.00577787961783045 0.0111030937457414 0.0105124147611219 0.0174427856997936 0.00543494155584209 0.00182091931806969 0.00173882773743518 0.00260722165639564 0.00492123303225609 0.00388026694558056 0.00548192055145766 0.00317004101749635 0.00473706207968477 0.0138902660316483 0.0110526283919598 0.00435682658601042 0.00112566056994637 0.0023394152523048 0.00196795198355764 0.0122780365224894 0.0145251657070724 0.00786489806073392 0.00169611421446833 0.00120455078442722 0.00214814982419503 NM_001191478.1 TAF5 Bos taurus TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (TAF5), mRNA. 0.0 5853 100.00 0.999691833590139 NM_006951.3 TAF5 Homo sapiens TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (TAF5), mRNA. 0.0 4782 92.71 0.999691833590139 TCONS_00150606_5 sp|Q15542|TAF5_HUMAN TAF5_HUMAN Transcription initiation factor TFIID subunit 5; 0.0 1434 96.50 0.99875 3 coding 0 0 0 0 1.78447426876525 0.0160054476882858 -0.123602506517274 0.0464397396664768 CTCAGCCGCAAGATGGCGGCGCTGGCAGAGGAGCAGACGGAGGTGGCGGTGAAGTTAGAGCCTGAGGGACCGCCGACGCTACTACCTCCGCAGGCGGGGGACGGCGCTGGCGAGGGTGGCGGCGGCACAACCAACAGCGGCCCCAACGGCGGCGGCGGGAACGTTGCGGCGGCGTCGTCGGCCGGCGGAGATGGTGGGACCCCCAAACCCTCGGTGGCTGTCTCCGCCGTTGCACCGGCGGGGGCGGCCCCGGTCCCCGCCGCTGCTCCGGAGGCCAGCGCTCCCCACGACCGACAGACTCTGCTCGCCGTGCTGCAGTTTCTACGTCAGAGCAACCTCCGCGAGGCCGAAGAAGCGCTGCGCCGTGAGGCCCGGCTGCTGGAGGAGGCAGTGGCGGGCTCCGGAGCCCCGGGAGAGGCAGACAGCGCCGGCGCTGAGACGGCTAGCGCGCTTCTTAGTCGGGTCACCGCCTCGGCGCCCGGCCCTTCGGCCCCGGATCCTCCGGTCAGCGGCGCTTCGGGGTCCGCCGCCGTCTCGGGCTTAGCGACAGGTTCTGTGGCTCCGGGTAAAGTTGGAAGTGTATCTGTGGAAGACCAGCCAGATGTCAGTGCCGTGCTGTCAGCCTACAGCCAACAGGGAGACCCCACGATGTATGAAGAATACTATAGCGGACTGAAACACTTCATTGAATGTTCCTTGGACTGCCATCGGGCAGAACTATCCCAACTCTTTTATCCCCTATTTGTACACATGTATTTGGAACTAGTCTACAATCAACATGAGAATGAAGCAAAATCATTCTTTGAGAAGTTCCATGGAGATCAGGAATGTTATTACCAGGATGACCTACGAGTATTATCTAGTCTTACCAAAAAGGAACACATGAAAGGGAATGAGACCATGTTGGATTTTCGAACAAGTAAATTTGTTCTGCGTATTTCCCGAGACTCGTACCAACTCTTGAAGAGGCATCTTCAGGAGAAACAGAACAATCAGATATGGAACATAGTTCAGGAGCACCTCTACATTGACATCTTTGATGGGATGCCGCGTAGTAAGCAACAGATAGATGCGATGGTGGGAAGTTTGGCAGGAGAGGCTAAACGAGAGGCAAACAAATCAAAGGTATTTTTTGGCTTATTAAAAGAGCCAGAAATTGAGGTGCCTTTGGATGATGAGGATGAAGAAGGAGAAAATGAAGAAGGAAAACCTAAAAAAAAGAAGCCTAAAAAAGATAGTATTGGATCCAAAAGTAAAAAACAAGATCCCAATGCTCCACCTCAAAACAGAATCCCTCTTCCTGAGTTGAAAGATTCAGATAAATTGGATAAGATAATGAATATGAAAGAAACCACAAAACGAGTACGCCTGGGGCCAGATTGTTTACCTTCCATTTGTTTCTATACATTCCTCAATGCTTACCAGGGCCTCACTGCAGTGGATGTCACTGATGATTCTAGTTTGATTGCTGGAGGTTTTGCAGATTCAACTGTCAGAGTGTGGTCTGTGACACCCAAAAAGCTTCGTAGTGTCAAACAAGCAGCAGATCTTAGCCTGATAGATAAAGAATCTGACGATGTCTTAGAAAGAATAATGGATGAGAAAACAGCAAGTGAGTTGAAGATCTTGTATGGTCACAGTGGTCCCGTCTATGGAGCCAGCTTCAGTCCAGATAGGAACTACCTGCTGTCCTCTTCGGAGGATGGAACTGTTAGATTGTGGAGTCTTCAAACATTTACGTGCTTGGTGGGATATAAAGGACACAACTATCCAGTGTGGGACACACAGTTTTCTCCATACGGATATTATTTTGTATCAGGGGGCCACGACAGAGTAGCTCGGCTCTGGGCTACAGATCACTATCAGCCTTTACGGATATTTGCTGGCCATCTTGCTGATGTGAATTGTACCAGATTCCATCCAAATTCTAATTATGTTGCTACGGGCTCTGCAGACAGAACTGTGCGGCTCTGGGACGTCCTGAATGGGAACTGTGTAAGGATATTCACTGGACACAAGGGACCAATTCATTCCTTGACATTTTCTCCCAATGGGAGATTCCTGGCTACAGGAGCAACAGATGGCAGAGTACTCCTTTGGGATATTGGACATGGTTTGATGGTTGGAGAATTAAAAGGACACACTGATACAGTCTGTTCACTTAGATTTAGTAGAGATGGTGAAATTTTGGCATCAGGTTCAATGGATAATACAGTACGGTTATGGGATGCTGTCAAAGCATTTGAAGATGTAGAGACTGATGACTTTACTACAGCCACGGGGCATATAAATTTACCTGAGAATTCACAGGAGTTATTGTTGGGAACATATATGACCAAATCAACACCAGTTGTACACCTCCATTTTACTCGAAGAAACTTGGTTCTAGCTGCAGGAGCTTACAGTCCTCAATAAACCATCGGTATTAAAAGACCTTTGGAAACTACTGTTTGAAAAAGGGAGACTAAAAGCAAATACCTCAGTGATTACTATTTAAGCTACAAAGAATGTTTTGTCTATATGGATCTGGAAGTATGCTGCTTAGAAAATCTGTACAGGACAGTTCCATGTTTCTATAGCAACCACATTTAACTAATTTCCGTTAGTTGAATAAGAGGTATTATGTTTGTGGAGGGGACATTCATGGTGCTTTGGATTGTGTGGAAACTATGCATTTTCTGTTCAAATGCTATTTTAATTTATTATGTTAAAAAAATCAATTGATTTCAATAATTTGTCCTGCTTCAAGATTCAAATTGAGTAATATAATACCATATTGAATTTTAGCTGAAGAATTCCATGAGCATGTACGTTTCTGCTGTAAAAATGTAGTTACTGTATGGCACTCAAGTACTATGTTATATGATCCACTAACATTTTTGCTTGGCTCATGATTAGTGGAACGTACGTTAACTGGCTAAGATGAACTACAGTTCCTTTCTGAGAAACAAATGAAGTACAACCATCCACTGACATCTGAATTTATACCTGTTGGACTGAGTGCACCCAAACACTCTATAAACCAGGTGAAATTAACTTCCATGTTCTACTTCAGCTAAAATGGCTGCATACAACCTAGTACACTTGAAGTCAGACATTTCAGTTGCTTACCTCCAGTACTGAGCCTTGCTTTGGAAAACTAAAAGATTTAGACCAAGTTACTGCCAGTTTTTTGCCTTTGTTGCATTTTGTACAGTTTTTATATTTTTGATATCTTGTAAATAAAGACAACCAGCTTTTCCAGG EMBV3_18917 TTGGGGACGGAAGGCCATTCCTGAGGTCAGGTCCTGAGAGCCCCTCGCCATGAGTACCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24554 CTTACTGCAATTAGTGTGGCCTGACGGACCTGGCATTAGATTTCAAGAAGAGTCTGACAC Gene GeneID:281690|CHSY1:XM_002696498:70_cdna UTR3_Alt 2 NULL GeneID:281690 21 GENE CHSY1 NULL chondroitin sulfate synthase 1 EMBV3_08263 GAACGAGCACCTGCAGTACATCATCACCTGTTCCTAAGTTGGACTCCTGGTGTGTGAGGA Variant GeneID:100139115|SURF1:XM_002691662:409_cdna 878^920 4 EMBV3_03708 GeneID:100139115 11 GENE SURF1 NULL surfeit 1 EMBV3_13653 ATTCCCCTCTACATAGACGACACCCTCACGCGACATAGTATGCTTAAGCAACAAGATCTA Variant GeneID:539076|GGNBP2:XM_002695616:1_cdna 207^287 1 EMBV3_13515 GeneID:539076 19 GENE GGNBP2 NULL gametogenetin binding protein 2 EMBV3_34651 ACACTGCCCCATTGTTTATAATGGTCTACCTATGGGAGTTAATCCTCACAGTCTCAAACC Gene BVV0102_099864 + 0 NULL GK000005.2:90720734-90847808 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140821 TCONS_00118521 TCONS_00200894 TCONS_00200893 3 XLOC_085250 XLOC_072652 XLOC_122544 Coding TCONS_00118521 XLOC_072652 Coding Coding - 21:1775869-1778843 - TSS88974 2974 1 TCONS_00118521_4 156 0.887693342299933 1 0 0 0 0 0 0 3.59804436203869e-07 1.64893831358264e-06 4.30394284886036e-07 2.65304312677963e-06 4.41039633896231e-05 1.98604484010436e-05 4.1484989456559e-05 5.71566686106111e-05 9.25212916703375e-06 4.89006210907275e-07 0.00243605498529143 0.00440416881996876 0.00300389528946996 0 1.44598970738229e-06 1.45822608924962e-07 0.000853158816970268 0.001182486291039 0.00153486519771352 1.04835751874347e-05 2.36902831900233e-06 2.79100259250286e-06 0.000333359524940917 0.000331884634568802 0.000703844655787113 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 1016 84.05 0.302958977807666 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 4e-11 75.2 66.39 0.117014122394082 TCONS_00118521_4 sp|P63136|POK17_HUMAN POK17_HUMAN HERV-K_11q22.1 provirus ancestral Pol protein; 1e-54 187 57.05 0.974358974358974 2 noncoding CTGTAATATATATTAATTAACATTAATTATAAAGATTAATTCAAGTATATTATGTCAATAAGTCTATACTTGTTGCCATATATAAATACATTTTGCATTTAGGTATATCTGTATATCAAAATGAGATAAGGAGGTTATACATTTATTATTTAAATTTATAGAGACCTAAACTAAACATTAGACCTAAATTAACATATCTCTAAATTTATATTGTTAAAATGTAAATTTTAAAAATTAAATTGACAACTGCTTGATAATTCCTTTGCCATAAAACCCCCATAGGTGTAATTGGGGTAACCAGACAAAAAATTGGTTTTATAACAAAACGGCCCCCTAGAGTGGGTCCATCTTCCCGCTCAAACTAAAAATGTAGTGGCTTCTTATCCGGGATTGATAGCTACTTTGATATTAAAGGAAAAAAGCGGAGCATTGAACTATTCGGCAAAGAGCCAGCAGAGATTGTAATTCCATATAATAAGGAACAACTTGATGCTCTTCTAATGTTTGATGAGGATTGGCAGATTGCCATAGGAAATTATTGTGGTCAATTTTTGCATCATTTACCCTCACATGTTTTGTTGAATTTTATGTCCAAACATCCAGTTACTTTTCCTGTCAGATGCTATTCTCCTATTCTAAATGCACAGATAACCTTTACTGACAGGCAGCAAACAGTAAAGCTCCATAGTTACTAAAAATCACCAAAAGGTTTTAGAAACACGGGAAACTTCACCTCAAAGAGCTGAAATAACAGCAGTCATAGAGGCTTTTGCTATGTTTGCAGATGAGGAATTTAACCTTTATTCGGATTCTCAGTATATTGTCAGGTTGTTTCCACACATTAAAACTGCGGTTTTGCCTGAAAGTAAAACTACCATATTTCACTTGTTAAGTAAATTACAGCAACAAATTGGAAAAGAAATAAAATATTTTTCATTGGACACATTCGGGCTCATTCCAGATTGCCCGGCCCTTAAAATGCCTTTAATGATTTGGCTAACTTGTTAACCAGAAATACAGTGGCTACTGTGATTGAGGAGGCCAGAGCCTCTCACTCACTTCATCATCAATATGCTACTGCTTTAAGATATCAATTCCAAATTCCCAGAGAGACTGCTCGAGAGATTGTGCATTCTTGCCTACACTGCCCCACTGTTTATAATAGTCTACCTATGGGAGTTAATCCTCGCAGTCTCAAACCTAATGTACTCTGGCAAATGGATGTAACTCATGTCTCTTCATTTGGAAAACTGTCCTTTGTTCATGTAACTGTAGATACCTTTTCTCATTTTATTATTGCAACTGCTCATACCGGAGAGGCAGTTAAAGATGTAATACAACATCTCTTTACTTGTTTTTCATATTTGGGCCTACCAAAAGCCTTGAAAACTGACAATGCTCCTGCTTATACTTCTAAGTCTTTTCAGGAATTTTGTATAAAGTTTCAAATTAAACATAATACAGGCATCCCTTATAATCCCCAGGGACAAGCCATTGTGGAAAGAGCACATCAAACATTAAAAATCCAAATTCAAAAACTAAAAGAAGGGGAGTTTAAGTATAGCTGTCCCCATCAAATCTTGCAACATGCTCTTTTCGTAATAAATATTTGCTCTTTTCGTAATAAATATTCTAAATACTGATCTGGCTGGAACTACTGCAATGCTTCGTCATTGGTGCCTGGAGCAATTGAATGCAAAACCATTAGTTAAATGGAAGGACCTCCTCTCCGGACAATGGAAGGGTCCTGACCCATTATTAACTAGCGGTCGAGGATGTGCTTGCATTTTTCCACAGGATGCAGATTCTCCAATTTAGATCCAAGACAGGTTGATTCGCCATGTTGCAGACCCCCAGACATCCAGTTCCCCCATTGCTTCGATCACAAAAGAGGAGCCCGCCGGAAGGGGAGGCAAGATAAACATCGAGATCCTGGCACGACCGGCGGGGCTGCTGCAGCTCGAACTCCAACCAGAAAATAATTCTACTTTATTCTGTTTTGGCTTGTCTACCCTCTCCTTATGTTTTTCTCTTTACCAACGATTCTGGAAAACTTAATGTACATGTGACTTTCACTGGTGGACCCAATGCAGTGACTTGTGAACAATGCATGCTCTCATCTTGTTTAAACCCTCAATATAATGTTTGCTCTTTGGTAGTGTTACAATGTCCACCTTATCTTATGATGTAACCACTTATTGATATAACTATAGTCTTGCTGTGTTACAACAACTACAAGATTTAATGTGATCGTGGCAATTTGTGGGTACTTATTTTAGCAATATCAGCTTTAATAGCAGCAATTATGTCTGTTACTGTGGCAGCAATATCATTGACTCAACAAGTGCATACTGCCCAATATGTTGATGCTATGTCTAAAAATGTCTCTTTAACTCTAGCAACACAGGAAGTTATAGATAGAAAATTGGAGATGAGAGTAGATGCCTTAGAAGAGGCAATAATGCATATTGGGACTGAGTTCCAGGCTTTAAAAGTGAAAATGGCTCTGTCATGCCACGCTGATTACCGGTGGATATGAGTGACATCTTTAAAGGTAAACGAGACAGATTATGAATGGGAAAAAATCAAAAAATATATCTCAGGTGTTTGCAACAGCTCTGACATTGGCCTGGACTTAGGGAAATTTCATAATCAAATACAGACCCTGGAACACTGTCGACTGGATTTTACCACCGCTGGAGCAGCTAATGACTTATTTCACACCTTCTCTAACTTTACTTCTGGAAAAAACATTCTGTCTAATATCTTTAGTTCTAATTTTGCTTCTCATAATCATTCTTCCTTGTATTGTCAGGATTCTTCGGCAGAACATTCAAAAGCTCGTGACTGAGCTGCATCTGGCTGTTTTAAGAAATAAAAAAGAGGGAGATGTGGGGAGCGAGCTCCGCCCCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTC TCONS_00118509 TCONS_00118510 s 3' 72347 TCONS_00118509 TCONS_00118510 s 3' 72347 EMBV3_18484 CAAGACGCTAGTCCTGCTGATGGGCAAAGAAGGTGTCCATGGCGGTACGATCAACAAGAA Gene GeneID:781603|PFN1:XM_002684947:197_cdna Constitutive 0 NULL GeneID:781603 1 GENE PFN1 NULL profilin 1 EMBV3_21053 ACGAGTGACCGATTATGCATTCTTTGGCCTACATTCTTTATTCTGCGATGAAGTTGAGGC Gene GeneID:282318|PPP1CC:NM_174581:18_cdna UTR3_Alt 2 NULL GeneID:282318 17 GENE PPP1CC NULL protein phosphatase 1, catalytic subunit, gamma isoform EMBV3_32617 AAGAGAGGAGCGTCAACAGCAGCACCATGGGTGAATCTGGACTGGGAAAGTCAACATTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36343 TCAGCAGGAGATAAAAGAAGACCCACGATGAGACAGCTGCAAAGAAACAGGCGATGCTCG Gene GeneID:782407|CCDC121:XM_002707690:428_cdna Constitutive 0 NULL GeneID:782407 11 GENE CCDC121 NULL coiled-coil domain containing 121 EMBV3_06489 TGATAGAGCAGCAGCGAGTGGAACCGGGCACTTTGCTGTTGTCGTTTAGTTGCCAAGTCA Gene BVT0102_149295 - 0 NULL GK000001.2:158172899-158298804 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05255 TACATTACGCCACCATCATGACCCGCAGTGTCTGTAACTATTTAGCCTTTGGCACCTGGC Gene GeneID:522385|LOC522385:XM_002699119:176_cdna Constitutive 0 NULL GeneID:522385 29 GENE LOC522385 NULL similar to olfactory receptor 981 EMBV3_16381 CCTCCTAGGGTCCTGAATATTTTTGTGTTCTAAGTCCATTCTCTTGGCCAGTATCCCCAA Gene BVT0102_028107 - 0 NULL GK000001.2:114281047-114292212 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32680 AGCTGACGAGTCTGGGCTTTTTGGAAGATGGTTCTAAGCCGGGAAGATTGAAACATTTGG Gene GeneID:613785|DNMT3L:XM_002685135:101_cdna Constitutive 1 NULL GeneID:613785 1 GENE DNMT3L NULL DNA (cytosine-5-)-methyltransferase 3-like EMBV3_18053 GAAGCCGGTGCAGGTGCCCTGCGGACACGTTTCTTCCTGTCCAAGATCCGGGCACATGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28939 ATTGGCTCTTATAGCTGAATTATTTCTTGGTTAGAAGTTTGGGCATATAACCAGATTAAA Gene GeneID:508266|CHN1:NM_001075349:214_cdna Constitutive 2 NULL GeneID:508266 2 GENE CHN1 MGC139749 chimerin (chimaerin) 1 EMBV3_23005 CCATTGTGATGAAAATTCCTTCGTTCATTTTTATTAACATGTCGATCTTTTCCCCCAAAC Gene GeneID:520956|FAM108C1:NM_001099014:39_cdna Constitutive 2 NULL GeneID:520956 21 GENE FAM108C1 MGC152409 abhydrolase domain-containing protein FAM108C1 EMBV3_19991 AGTGAGGAGGACGGCTCCATCTACGAGATGGTGGATGACCCCGACGTCTGGGTGCACAAC Gene GeneID:529043|ARHGEF10L:NM_001046297:203_cdna Constitutive 0 NULL GeneID:529043 2 GENE ARHGEF10L MGC137435 Rho guanine nucleotide exchange factor (GEF) 10-like EMBV3_25401 TTCCACTAGAGTAAGATCCCTGAAGGCAGAAAGTGTCTTGCTCATCCCCGTTACCACAGC Gene GeneID:614149|NUDT5:NM_001076314:14_cdna UTR3_Alt 4 NULL GeneID:614149 13 GENE NUDT5 MGC140268 nudix (nucleoside diphosphate linked moiety X)-type motif 5 EMBV3_01135 GGAGGCGCAACTGACACTCATAGGCTTCACAAAGAAGGGAAATTGCTTCCACTGGTTCAC Gene GeneID:513762|GLRX2:NM_001040523:11_cdna Constitutive 0 NULL GeneID:513762 16 GENE GLRX2 MGC133684 glutaredoxin 2 EMBV3_16221 GATTGGGAATCTTCTTTGGACTTAGTCTCTCCCCTAAGAGTCAAAGGTGCATCAATATCC Gene BVT0102_393713 + 0 NULL GK000009.2:65962158-66160564 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235790 TCONS_00235791 TCONS_00235802 TCONS_00235793 TCONS_00235782 TCONS_00235794 TCONS_00235801 1 XLOC_144300 Coding TCONS_00235793 XLOC_144300 Coding Coding KIAA1009 9:66113033-66212206 j TSS176642 6016 1 TCONS_00235793_6 1248 0.0585106382978723 28 0.939620054047513 0.000142656696968377 2.19155942432213e-06 8.69779554683469e-05 3.07764858584366e-05 6.23601091833924e-07 7.55837217675228e-10 1.06712208573948e-06 0.000306107494540834 0.00058452164975552 7.33417393938243e-10 1.19401185115264e-22 1.5525150475814e-20 3.56484546894423e-11 4.16907856735387e-23 1.86822778048396e-24 0.00103505671151691 5.81608937534593e-15 1.33287641189927e-08 3.76430568951911e-06 4.43059018789118e-12 9.25166778578417e-12 1.58382446745757e-16 0.000537972682697934 3.13041311939314e-12 4.52349556206324e-07 8.86942077200625e-07 2.39234036008537e-10 3.07672245119313e-19 1.29001846052622e-16 3.53878967575344e-16 NM_001206593.1 KIAA1009 Bos taurus KIAA1009 ortholog (KIAA1009), mRNA. 0.0 7048 100.00 0.649434840425532 XM_005248674.1 KIAA1009 PREDICTED: Homo sapiens KIAA1009 (KIAA1009), transcript variant X1, 0.0 4498 85.14 0.655917553191489 TCONS_00235793_6 sp|Q5TB80|CE162_HUMAN QN1_HUMAN Protein QN1 homolog; 0.0 1991 82.13 0.989583333333333 0 coding 0 0 0 0 0.0660234188298774 0.589722619163505 0.0180144497252048 0.748370139976612 GCAGAGTCTCCAATGGTGCAGCAGTAGCGGCTCCCACCCGCAAGACCGTCCTGCTAAGCCACGACCACTATAACCTTCGCTCGCGGAGGCGAGAAGATGCAAACTACAGTCCCTCCGCGCCCGCAAGCCACGTGACCAGCTTGCATCATGTGACTCCGGAGGCTGGCGGCGACGTTCGTTACCCTAGCAACTGGCTGCCCCCCACCCCCTCACTCCACCCCCATCCCTTGGACCTTCCGGGAGAGCGCGGAATTCGGAAGCAAAGCGTTTCCAATGTTGTAAACACTCCAGAATGTTTACTTTGGAAAGTGAAAAGTATTGATAATGGCCCACTATTCCAAAGAAGAGCTGGATGAAGAGTTTGAACAGTTCATGAAAGAACTTTCAGATGATTCTTTTGAAAATTCAAATAAAACACCTAGACAACCTAAAGAAGTGAAGAAGAAAGATACAGTGCCATGGTGGATAACTGAAGATGAATTTGAAAGTGGTGGACCATTTGGGACAAATGTAAGCTATTTGAAAACAAAGAAGACTTCTCAGCCTGTTAAGGAAACAGAAGAGGAGTCTGCTGAAAGGATTCAGTTTCTTAAGAGCAGTGGAACCTCTATCTTGAGTATTGACAGCTTAGAAGCCAATGAGATAGTTTCTGAGCTCAATCATAGTGTTCTCGGATTGGGACTGGACACATTAGAAGAGCAAGAGGAAAAAGAACAATTTTTTGCCAGACTTGAGAAAGGCTTAACATCGTCCATTGATTATTCAAGGTTAAATAAGGAATTGGATTCTAATGACTCCATACATTTTAAAGCTTTACATAGAGTTGATCACTGCAACTCTTGAGAAGTGACCTAGGAAGGAGGGGCTGTGCCTTATGTTCTTGGCTTACCCAGCAAGAACATGCAGGGACCCTGATGGTCCATGGTGATTGCCTGTCTTAACAGTGACAACACAGATAATCAAGCTAATATGGATCTAACTGAAGATAAACATGAGCATGAATCAAAACATGAAGAACTGACAGAAAATTATAGTGATGATTTTGAAGATGAGGAGGATGTTGATGCACCTTTGACTCTTAAGGGAGAGACTAAGTCCAAAGAAGATTCCCAATCAGAAAAAACGAATGTACCCAAACAGGAAGAAGAAAAAACTGGCATGCTGGCTAATGTAGTGCTGCTTGATTCATTAGACTCTGTTGCAGAAGTCAGCCTTGATGAACAGGATAGAACAAAAACTAAGCCAAAGGCTGTGTCAGATATGACTGATAATGAAATGATAGGAACAGGTATTTCTTACGGACAAAGCAACAGTGACATTGAAGCTCTGCATCAGGCTTATTGTCACGTAGCCCATTCTTTGGGAGATGCAGATGAACAAAGAACTGAGAGCAATGCAGCAGAAAATACCAAGAGCTCAACAAAAGATCATCCTCAAGAAAATGAAGGGTCCTCTAAGAACATCTCTACTACAGAGTCTGATCTGCCCACAGTAGAGGAGCTGATGAAGCCTATCAGAATAGATTCCTTTGGGGTCAGTGGTTTTGATTTACAACCTGTCAGCTATAAGAAACTCGCTGAGAATAAAGAAACTGAATTTGTTAGCCCTTTACCCCTTAAGATTAACCCAAACGTTGTGTCTCAAGAACCACAAACTGTGAGCCAATTGTTGGACAAAAATGAAGAGAATGTAGTTTTAGAAAAGGCAACAAATGAAGTTACAGAAAATAACTATCCAAGAGCAAATGCTGTGGAAGAACAAATAGATAAAATGTACCTTGATATTTTGAAGAAAAAAATATCTGTTGGTCCTTCATTATTACCTCAGGATGACAAAACAAATAAGACTTTAAGATCTCAACTCGATTCTGGAGAAGAAGGGACTATAACTGGTAAACAGCTACCATACAAGAAGACCAAAAGTGCACCTCCTTTATTTAAAAGAAAACCCCAGAGTGGATTATATGCATCAGTTAGGAGTTCAGGGTATGGCAAACCCAGTTCACCATTCAAGACATTTTCTAATCTTGAAAAGAAAACTTCTAAGGACATCATGAAGAGCAAAAACTTGAGATCTATTCTTGCCTCAAATCAAAGTAGGAAAAAAGAAATCTTACCTGCAACAAAGCTGATCAAGCCTGCATCTTTGGGTAAACCAGCTCCTCAAACTGAAAGTTGGCTGGCTACTCCTAAGTCGTCTGAGGGCCCCACAGAAGCTGACTCCTGTGTTCAGTTTCAGAATGATTCTTCAGGATACCATGGTGGGAACAAGGAGACAGAATTGCTTATGTTTAAAAGAGTTCAGGAAGCAGAGGAAAAATGGAAGGGTGCCCAAGCTCTGATTGAACAAATTAAAGTCACTTTCTCAGAAAAGGAGAAAGAGCTGGAAAATAAGATGGAGGAACTAAAGAGACAACAGGAAAAGGAACTCTTCAGACTGAATCAAGACAATTATATTCTTCAAGCCAAGTTGAGTAGTTTTGAAGAATCAAACAAAAAACACAGGTGGTTACATTTGGGAGAAACCACTGATCCTGTCACTGAAGAAAAATTGAAGCAAATCCAAAAAGAAATACAAGAACAAGAGATGCTTCTTCAAGGATATCAGCAGGAAAATGAAAAATTGTATAATCAAGTGAAAGATCTCCAAGAACAAAACAAAAAAAATGAGGAGCGAATGTTCAAGGAAAACCAGAGTTTATTCAGTGAATTAGCTGCCTTAAAAGAACAGATGCACAGAAGTCGTTTCCTGTCTCAAGCAGTTGAAGATTCAGAGCCCACCAAAAATCAAAATTTTACAGATCTGTTAGCAGAACTACGGGCAGCACAGAAAGAAAAGAACAGTTTGTTGGAAGACATCAAAAGACTGAAGCAGGACAAACAAGCTCTTGAAGTAGACTTGGAAAAAGTGAAGAAAGAGAGAGACCAAGCCAAAGACCAGATTGCTTATGCTACAGGTGAAAAATTATATGAAATAAAAATTATAGAAGAAACCCATAAACAAGAAATCAGTCGTCTGCAAAAAAGATTACAGTGGTATGCCGAAAATCAGGAACTTCTAGATAAAGATGCAGTTCGGCTTAAAGAAGCAAATGAAGAAATTGAGAAGCTGAAACTTGAGGTTGAGAAGCTGAAAGCTGAATCTGGAAATCCATCCATCCAGCAGAAGATACGTTTAAAAGAAAAAGCAGCTGATACCAAAAGAATTCAGGATCTAGAGCGACAGGTTAAGGAAATGGAAGGAATTCTAAAGAGACGATACCCCAATTCTTTGCCAGCTTTAATACTGGCTGCGTCAGCAGCTGGTGATACAGCAGATAGAAATACAGTGGAGTTTATGGAAAAAAGGATAAAAAAACTAGAAGCTGATCTGGAGGGCAGAGATGAAGAAGCAAAGAAAAGCCTTCGTACCATGGAACAGCAGTTTCAGAAAATGAAGATTCAGTATGAGCAGAGACTGGAGGAACAGGAGCAGTTACTTGCTTGCAAATTGAAGGAGGCAGCCCAGAACCAACAGGACAACTCCTCAAGGACTAAAGCACTGGAGAAGGAACTGGATGATGTTAAGGAAGCCCATCAGATCACCATAAGAAACCTTGAAGCTGAAATAGATGTTCTTAAACATCAGAATGCTGAATTGGAACTCAGGAAGACTGAGAAGGATGATAAAGATTTCCAGTCCATAGAGTTCCAGGTGGAACAGGCTCACTCTAAAGCTAAACTGGTCAGGCTCAATGAGGAGCTGGCTGCAAAGGGGAGAGAGATACAGGACCTTTCCAAAACTGTGGAGCGGCTGCAGAAGGAGAGGAGAAAGATGCTCTCTAACCAGCAGTCTAAGGCTCGAGAGGAAATGACTGCCAAAAGGGTGAAGAAAGATGGTCTGCACCCTGGCAAAGGAAATGCTGACTCCTTCGGAACCCTGGAGGGCAAACTTTACCAACCACATACTTTTACTGATTCTCACGTTTCAGAGGTTTTACAAGAAAACTGCAGATTGAAAAATGAAGTGGCGAGATTAACTGTGGAGGGGAATGAGCTGAAGATGAAATCTGAAGCTGCAGTGAATCAATTTGAAAACACCATGAAAAGGTTCAAGGAAGAAACTGCAGCACACATCACATCTCTCAAAGCATCTCATCAGAGGGAAGTAGAGAAACTCCTTTGCCAAAATGCAGTTGAGAATTCTTCTTCCAAAGTAGCTGAACTAAATCGTAAAATAGCAACTCAGGAGGTACTTATAAAACATTTTCAAAATCAAGTCAATGAGCTGCAGAGTAAGCAAGAGTCTCTTGTAGTTTCTCAAGTTCGAGAAGAAATCCTACAAAAAGAGATTACAAAACTCTTGGAAGAATTGAGAGAAGCCAAAGAAAATCATACACCAGAGATGAAACATTTTATGGTCTTAGAAAAGAAAATCAAACAGATGGAAATGAGACATGAGCAAAGAGAACAGGAGCTTCAGCAGATAATACAGCAGACACACCAAGTAGTAGAAACCGAGCAAAACAGAGAAATTGAGAAATGGAAAAGACTTGCACAGCTGAAGAATCGGGAGCTGGACAAGTTCCGAACAGAGTTGGATTCGATCTTGGACGTTCTCCGAGAGCTGCACCGGCAGGGGGTGGTCGTGCCAGTTGCTTTGGCAGAAGTGAATGCACCAGAGTATTAGTAGAAACTCACATATCACGTGACCTCACAGGGAGGCCTGAAGATGGTTGGGGTCCCCGTCAGAGGAGGCTTTTGAAAAAAGTGTTCCAGTATGTTGCTGGAACACAAGAACATTTCAAAATAAATCATATTTTACCAGCTAGGGAAAAATAAGAGCAGCATTAATGGTGTATTTTACTGGAAAAAATTAGTCATCAACATTTTAAATAATTACAGACAAGTCCCTTTATGGCAGATGATTAGAACTGGTGATATTTATTGCAAAAGGCCTCACACGCTAGATATGGGAGGAAAACAAAATTGCAGATACTTGGCCATTATTGACTAGGTGTGTATTTTTAATTCTTGTCCAGAAGAACAGCTCCTCTTTCTCACAGAAACGGGGTGGGCAGTGTGAGCACAGCGGCTCAGACAGTCACTGATGTAATGGTGCTTCATGTTCATTCTGGTGAGAGTTGTAACTTGCGTACAGGTAGATAGTGAACTCTTGTGTTCTCCCAGATTTCCACTCCTGCCTCTTGGCGCCTCATTTTGCACCTGATACAAGGTGCAAGGTATATATCACAAGTAGTAGGGGAATTTGATTTATTCACTGTTTCACTTATGCTGTGTCTCAAATGCCAGTCCCTCTTTTGGAAGTCTAAAGTGATAAACAGAATGCAACATTTTTACTTCATTTAAGAAGTGAATATATGTTCACTAAAGAAATTAAAAGCATGTGTAGAAGTAGCCAGATTATTCTCTTACATCACAGTTCCATTTCCCAAAGCAGCTAGGAGGCACGTGAGATACTGCTACATGGAAGCTGTAGCTGGGGCTTTCTCTGGGGCTGCTTTGTTTTCAGATGTTCTGGCTCACTGCTGTCCAATAGGAAGATCCTGTGAGCCACGTGTCACTTAAAAATTTTTATAGCCACGTTTAAAAAGGTAAAAAGAAACAAATGAAGTTAATTTTGGTAATTTATGTAATATATCTAAAATAATATAAAAATTGGGATTTTACATTCTTTTTTTCATCCTAAGTTTCCAAAATCAGGTAAGTTTTCCATTTATAGCACATCTCAGTTTGAACCAGCCACATTCTAAGTGCTCAATAACCACATGCCAGCAAGTGCAATTCTAGAATAATCATTACAAAGTGAAGTACTTTATAAAGGACATGTGAAGTAGACCTTGGTAAACTTATAGGTATTAAATGTGAAATGTGGAAATTAAATGTAAGGAATACAGTTAATATCTCGATGTCCAGCATTTTTAATGTTCTTTTCCTAAGGGTAGAAAGCATTAATTAAAATTTGCTATTTTTTTATGTGAAAGAGTTGTAAGTTATAAACTATTTTGGTTATTATT EMBV3_33226 TGTCACTGGGCTCTCCAGTTCAGCAGGAGTGAGCGGAGTCACTGGCACCCAATTTTCAGA Gene GeneID:781661|LOC781661:XR_084622:350_cdna Constitutive 0 NULL GeneID:781661 19 PSEUDO LOC781661 NULL similar to Smith-Magenis syndrome chromosome region, candidate 8 EMBV3_08718 GAAGCTACGTCGACTATTTCTCCTCGTCCCTGTACCAAGCCCTGGCAGACATGCTGGAAA Gene GeneID:617610|HRC:NM_001102313:415_cdna Constitutive 0 NULL GeneID:617610 18 GENE HRC MGC160130 histidine rich calcium binding protein EMBV3_25883 GACAACAAGTCCCGGCTGCGCAAGATGAAGAGCTGCCTGGAGTTTAGCCTGAGGATCCAG Variant GeneID:511956|MAEA:NM_001034415:51_cdna 518^631 1 EMBV3_08204 GeneID:511956 6 GENE MAEA MGC128694 macrophage erythroblast attacher EMBV3_32371 CCCGCCCCGCGCCCATGGCCGATCCGGATCGACTCAGATTCAGACACTGAGGCAGGAGCC Variant GeneID:504463|SIRT2:NM_001113531:538_cdna 102^148 1 EMBV3_28222 GeneID:504463 18 GENE SIRT2 NULL sirtuin (silent mating type information regulation 2 homolog) 2 (S. cerevisiae) EMBV3_36021 CACCCACGCTGACCTTATCTCTGTGTGAAAGGACGCAGCCCTGGGGCAAATGTGAATTAA Gene GeneID:522202|CDH15:NM_001102066:288_cdna Constitutive 0 NULL GeneID:522202 18 GENE CDH15 MGC155243 cadherin 15, M-cadherin (myotubule) EMBV3_02834 ATACAGAAGGATGTGCCAACACCTAGAGTAACAGAGCCGCTACGGAAGAGGAATAAGTCC Gene BVV0101_025681 - 0 NULL GK000028.2:9594389-9964005 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158999 TCONS_00158995 TCONS_00159000 TCONS_00158993 TCONS_00158998 TCONS_00158994 TCONS_00159001 1 XLOC_097332 Coding TCONS_00158998 XLOC_097332 Coding Coding MTR 28:9468534-9599306 j TSS119255 8637 1 TCONS_00158998_7 862 0.206784763227973 32 0.934197949086571 1.73725775247839e-10 1.10276160355043e-06 9.80907310849952e-08 1.17437515159604e-07 4.81340285821381e-10 8.22762742212416e-11 1.88813258892364e-07 6.50792445108645e-08 0.000420255918364121 0.000193979011488429 8.5227885950521e-05 1.82053709391495e-06 1.60334765152376e-05 4.18554814190392e-16 3.76105236035236e-05 0.00100960192586986 2.36253106909409e-08 2.21617634081376e-09 5.24970179913201e-16 3.62567301605666e-09 0.000185581946439132 0.000214638126888329 0.000180893149184947 8.20482625627941e-08 3.81126149764086e-40 1.03785419724593e-07 3.19241706677343e-32 1.25774324228487e-06 2.08191530890278e-08 6.93976386087663e-05 NM_001030298.1 MTR Bos taurus 5-methyltetrahydrofolate-homocysteine methyltransferase (MTR), mRNA. 0.0 4713 99.85 0.303577631121917 XM_005273140.1 MTR PREDICTED: Homo sapiens 5-methyltetrahydrofolate-homocysteine methyltransferase (MTR), transcript variant X1, mRNA. 0.0 3532 83.34 0.377677434294315 TCONS_00158998_7 sp|Q4JIJ3|METH_BOVIN METH_BOVIN Methionine synthase; 0.0 1778 99.65 0.998839907192575 4 coding 0 0 0 0 -0.061904021089136 0.553615817578956 -0.013994224046691 0.80938241613086 GGAGAAAGAAGACTCCGGAGCATGGCCCCCACGCTCCAGGACCTGACGCCATCTGCAGGGATGAAGAAGACCCTGCAAGATGAGATTGAAGCTATCCTGCAGGAGAGGATTATGGTGCTTGATGGAGGGATGGGGACCATGATCCAGCAGCACAAGCTGAGTGAAGAAGACTTCCGAGGACAAGAATTTAAAGATCATGCCAGGCCCCTGAAAGGCAACAATGACATTTTAAGTATAACTCAGCCCAGTGTCATTTACCAAATCCATAAGGAGTACCTCCTAGCTGGGGCAGATATCATTGAAACAAATACTTTCAGCAGCACTTCTATTGCCCAAGCTGACTATGGCCTGGAACACTTGGCCTACCGGATGAACATGTGCTCTGCGGGAGTGGCCAGAAAAGCAGCCGAGGACATCTCTCTCCAGACAGGAATTAAGAGGTATGTGGCAGGAGCTCTGGGTCCAACTAACAAGACACTCTCTGTGTCGCCATCTGTGGAAAGACCAGATTACAGGAACATCACATTTGATGAACTTGTTGAAGCATACAAAGAGCAGGCCAAAGGGCTTCTGGATGGTGGAGTGGATATCTTACTCATTGAAACTATTTTTGATACCGCCAATGCCAAGGCAGCCTTGTTTGCAGTCCAAAAACTTTTTGAAGAGGAGTATGTTCCCCGGCCTGTCTTTATTTCAGGGACAATTGTTGATAAAAGTGGGCGGACTCTCTCTGGCCAGACTGGGGAGGCATTTGTCATCAGCGTGTCTCATGCAGACCCACTCTGCATTGGATTAAATTGTGCTCTGGGTGCAGCTGAAATGAGACCTTTTATTGAAACAATTGGAAAATGTACAACAGCTTATGTTCTCTGTTATCCCAATGCAGGTCTTCCCAATACCTTCGGTGACTATGATGAAACTCCCCACGTGATGGCCATGCATTTAAAGGATTTTGCTGTTGATGGCTTGGTCAACATAGTTGGCGGATGCTGTGGTACGACACCAGATCATATCAGAGAAATTGCTGAAGCTGTGAAAAACTGTAAGCCTAGAGTTCCACCTGCCACTGTTTTCGAAGGGCATATGCTACTGTCTGGAAGCACTGAGCGTTGCCAAAATGCAGGTGGAAATGGGAGCCCAGGTGTTGGATATTAACATGGATGATGGCATGCTGGATGGTCCAAGTGCAATGACCAGATTCTGCAACTTCATTGCTTCCGAGCCTGACATTGCCAAGGTGCCCTTGTGCATTGACTCTTCCAATTTTGCTGTGATTGAAGCCGGCTTAAAGTGCTGCCAGGGGAAGTGCATTGTTAATAGCATCAGCTTGAAGGAGGGAGAGGATGACTTCTTGGAGAAGGCCAGAAAGATTAAGAAGTTTGGAGCTGCCGTGGTGGTTATGGCTTTTGATGAAGAAGGACAGGCAACAGAAACAGATACCAAAATCAGAGTGTGCACCCGGGCCTACCATCTCCTTTTGAAAAAACTGGGCTTCAATCCAAATGACATCATCTTTGACCCTAATATCCTCACCATTGGTACTGGGATGGAAGAACATAACTTGTATGCTGTTAATTTTATCAATGCAACAAAAGTCATTAAAGAAACGCTGCCTGGAGCCAAAGTAAGCGGTGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAGGCAATGCATGGGGTTTTCCTGTACCATGCGATCAAGTTTGGTATGGACATGGGAATAGTGAATGCTGGAAGCCTTCCTGTATATGATGACATCCACAAGGAGCTTCTCCAGCTCTGTGAGGACCTCATCTGGAACAGAGACCCTGAGGCCACCGAGAAGCTCTTACACTACGCCCAGACTCAGGGCAAAGGAGGGAAGAAAGTCATCCAGACTGATGAGTGGAGGAATGGCCCTCTCGAAGAACGCCTTGAGTACGCTCTTGTGAAGGGCATTGAAAAATATATTATTGAAGATACTGAGGAAGCCAGGTTAAACCAGGAAAAATATCCCCGACCTCTGAATATAATTGAAGGGCCGCTGATGAATGGCATGAAAATTGTTGGTGATCTTTTTGGAGCTGGAAAAATGTTTCTACCTCAGGTTATAAAGTCAGCTCGGGTCATGAAGAAGGCCGTGGGTCACCTTATTCCCTTCATGGAAAAAGAGAGAGAAGAAACCAAAGTGCTTACTGGCAAAATAGAAGATGAGGACCCTTACCAAGGCACCATCGTGCTGGCTACTGTTAAAGGTGACGTACACGACATAGGCAAGAACATAGTTGGAGTGGTTCTTGGCTGCAATAATTTCAGAGTTATTGATTTAGGAGTCATGACTCCATGTGACAAGATACTGAAGGCTGCTCTAGACCACAAAGCAGATATAATTGGCCTGTCAGGACTCATCACTCCTTCCCTGGATGAAATGATTTTTGTCGCTAAGGAAATGGAGAGACTAGCTATAAAGATCCCATTGTTGATCGGAGGAGCTACCACTTCCAGAACCCACACAGCAGTTAAAATAGCCCCAAGATACAGTGCGCCCGTGATCCACGTCCTGGATGCATCCAAGAGCGTGGTGGTGTGTTCTCAACTGTTAGATGAGAATCTAAAAGATGAGTACTTTGAGGAGATCCTGGAAGAATATGAAGATATTAGACAGGACCATTATGAATCTCTCAAGGAGAGAAGATACTTAACCTTAAGGCAAGCTAGAGAAAATGGTTTCCATATTGACTGGCTGTCAGAGCCTCCTCCAGTGAAGCCCACGTTCCTCGGGACTCGGGTCTTTGAAGACTACGACCTGCAGAAGCTGGTGGACTACATTGATTGGAAGCCTTTCTTCGACGTCTGGCAGCTCCGGGGCAAATACCCGAACCGAGGCTTTCCCAAGATATTTGACGACAAAACTGTAGGTGAAGAGGCCAAAAAGGTCTATGATGATGCCCAAAATATGCTGCAGGCACTGATCAGTCAGAAGAAGCTCCAGGCCAGGGGTGTGGTTGGGTTCTGGCCAGCACAGAGCATTCAGGATGATATCCACCTGTACGCGGAAGGCGCAGTGCCACAGGCCTCGGAGCCCATAGCCACCTTCTACGGGCTCAGGCAGCAGGCCGAGAAGGACTCTGCCAGCTCGGACCCCTACCTCTGCCTCTCGGACTTCATCGCCCCTCTGCACTCAGGTATCCCCGACTACCTGGGCCTGTTCGCCGTTGCCTGCTTTGGGGTGGAGGAGCTGAGCAAGGCCTACGAGGAGGAGTGTGATGACTACAGCAGCATCATGGTCAAGGCGCTGGGGGACCGGCTGGCCGAGGCCTTCGCTGAGGAGCTGCACGAGCGGGTCCGCAGGGAGCTGTGGGGTTACTGTAGTGGTGAGCAGCTGGCTGTGGCTGACCTGCGGAGACTGCGCTACGAGGGCATCCGGCCAGCGCCCGGCTATCCCAGCCAGCCTGACCACACTGAGAAGCTGACCATGTGGAGGCTGGCGGACGTGGAGCAGCGCACAGGCATTAGGTTAACAGAATCGCTGGCCATGGCACCTGCTTCAGCAGTATCTGGCCTTTACTTCTCCAACTTGAAGTCCAAGTATTTTGCCGTGGGGAAAATTTCCAAGGATCAGATTGAGGATTATGCTTCGAGGAAGAACATGTCTGTGGCCGAGGTTGAGAAATGGCTTGGACCCATTTTGGGATATGATACAGACTAACTTTTTTTTTTTTTTTAACCTGTCTGTACTTGGTGATCCTCAGGGAAACAGTCCAAAGTGCCTATTATAATCATAACAGCGCAATGGCCAGGAGCCCATCTGCATCTGGTTGCCCTTTGCACCACTCCAGGGTGCGGACCGTTGGGGGGACCTTATAGAAGACCAGGGTCTGGACTTTGAATAAAGAGCAGCGAGTCAGACTCCAGGGGTGTCCCTGGTCCCTTGGGGACTAGAACAAGCTGGAGATGGAGGTCTTTTGCATTTCAAAGCAAGTCAGACTTTTTTCGTTTTTATCCCAGACCTAGGAGGTCACTTCAGTTGAATAGAAAATGTGACCCTTTGGCAGAGTGATGCTGTGAGCAATGGGACATTTAAATCTGAGTGGTTAGAGCTGTTACTCTGACAGGGAAGAAGCATCACTCTGCTCTCTCCCGGAGACCTCCTTTCCTGAAGCCTCCAGGAGATGCTTAAAGGCATCCCTTTAGCCAAAGGCACACTCTCCCTGAGGCTTATTAGAGGCGCTCAGGCTGCTTGCCCTAGCGAGTTAAATACAGCATTCTCCAAGCATTTTGTTCTCTCATAATTTCCTATTCCCTCGCCCTGAGGGGGAGGAAGGAGGTAGGCAGAGGCAGCGGCCGCTAAGGGTGGTTAACCCCTGGGTCCTGTTCCAGAGTTGAGCAGGCTCAGCTGCGCTTCCTGTGCAGAGTGGGTGGACGGGCAGCCTCACTTCTCAGTTCTTCCTTTTCTGCACTGCCCCAACTCCAAACGTGTACGGTATCGGAACAGCACGTGGACTTGTTCATGGTTAGTGCAGGGAGATGGTTGAGAGCGTGGGCTTTAAGTCAGACACACCCGGATTCAAGTTTCAGCTTTGCCACATGCTTGCTGTATGACGGAGGCAAATTACTTCAGTTCTCTTAACACAATTTTCTCAATCTGTAAAATGGGGACAGTGATACTAGTTCCTCTCTTGTGGGCATGAGACGTGGATTAAATGAGAGAACGCATGTAAGGCGGGTAACATGGGTCTGGCATATAGTGAGAGCTTGATAGACAGCAGCTTCTGTGAGGTCTCTAGAGCTCAGCACAGGGTAGGTACTCAAGGAAAGGGAATAAGAGATTGATGGGGTGAAAAGACATTCAGGAAGTGCACGTGGGAATGACTGGTTCCGTATACTAGGTACCCTTTTTGGAACACACTTGAACACAGTGACTGGAGTAAGAAGCTACTTTCTATGTCATTGGCATCATCAGATCTCATTTCCTGTAAGACAGTCCCCTCTCCCCTCGTGGTATAAGCTGGCCTCATCCCAAAGCAGTTACATCAAATATACACTCAGGTATGTTGGAGGTGAAAGGGGGAAAAAGCTTAGCAGTTGATAATCCTATATAACAGCATATACATGTGTTCCTGAAGAGTAACATGGCTTTTCAGGCATCACTGGCCCTTAAAGAGAGAATTATATGCTTTCTTTTAAAAAGAGAATTATATGCTTTCTTTAGGGTCCATTTAATCTGTCCTAGATGCTCAGTTGGAGGACTTATTCCTCTTCCGTAGCAGCTCTGTTACTCTAGGTGTTGGCACATCCTTCTGTATAAGAAAGAATAATCTTTTCCTAATATTTTAATTTATTTTATCTGAATCACACTTGTTAAAAGTTTCCCAGTTTCATTAAATGTTTACCATATCTTTTTTCAACTCATAATGTGACAGAACGGCTTCCTTCATTGTATTGTTGATCTGATCCTGTGATGGATGCCTTTTATCTAAAGACAAAACCAATTTGTTCAAGTTTGAGCCCCTGTATTTTCATTAAAGAATATAGAAGATAGCTTGAGGAAAACCCCTTCTTTAATTTATGTCAGGTGACCTCAAAGGCAGGAAGGTGACCATGCTGTACCCGGAGTCTTTTCTGTGTCTCTGTCATCTAGAACGTCACCTTGTCGTCAGCATCCATGGCTCTCACATCCACTCGCTCACTCTCATCATTCCCCTTAGGGATCCCATGTTTATTTTTCCCTCTAAAGAAGCACTTGTTTGGAAGCTTGCTCACTCTGCTACCTGTGTATGGGATGGAGGCCAGTGTATGGGATGATGGTAGAGGTTAGGTCTCATAATGTCCTGTTTCTCCTCTGAGACATTCTGCTATTCCTTCCTTTCACAGCTGGGCTCATTTAGAGACTAGCCTGTCTTCTCTCCATTTTTCTCAGGCTTGTCTTCAACAAGTATCTGAGTGTCTGTTTTATGCCAACCACTTTTTCCCATTCTCTCCTTAACTCAGTGAAGTTAAGTGTTTTTTTTTTAAAACCCATCTCTTCTGTCATAAATGACCTCTTAATTGTTAGATCTGTTAAGATCTAACATTGGCTATTCTAGTGATTTTTCTTCTCTGGATTTGGGCAATGTTGACCACTTCAGAAATCGTCTTTCCCTGTTTCCTCCTGACTTCACTTTTCTGGTTAACTTTACATGTTTCTTATTTCTTAGCTTCTTTCATAATTTTCTCTTCCTCTACCCATTTAAATCCTGGTCCTCACGATCCCATCACTAGTTACCTTCTTAGTCATGTAGTTTCAGTGGGCAATCTCATCAAACTAGTATCTTTATCCAGACTCCTCTGTCCTGAAGAACATAGCATAGCAAGCATCCAGTATACAAGAGACACCTCAAACCCAGTGCGTCTCAAACCAGTATCATCTTACTCTTCTCAAATTCTTGATATATTCAGTAAGGAAGAATTCTACCATCGCTCCAACAGAAACCTCAAACTCACCCCAATTTGCACATAAAAGACACACTTTTAGTTGGGAAGGTGAAATACCTTCCCCAATACCTTAACCAGATGGTTAAGGCAGGCAGTGTTTTAGGTTAAGGCCTGATTTGGGACTTGAAGTATAAAGGTGAAGAAGCAAGGTAGAAACAAATGAAGAACTGCCTTTGTTCATGAATACTGAAGGTTGTAAGGGTGTCAGATCTCCCCCTAAATTATCTGTAGACTCAACGCCATTTCAAGCAGAAATTCCAACAGAGGTTTTGCTGAATGTGATGAGCAGATATTTAAATGTTTGTGGAATGGCAAAGGACTAAGATAGCTGGATGCTTCTAACTATGATGAAGAGGTTGAGGAGACTTACAAGATAGTAAGTTGTATTGAAGAGTCTGTGGTGCAGGCGTTGTGAGCAGTGCAGTGAAATGAGGAGCCTGGAAAGTAGCCCATGCATATATACTGACCTCTGAGATATGATGAGATGGCATGGCAGGTCAGTGGGGGACGAAGGGTGACTCCGTAAGTAGTTTTAGAACAACGGTTATCCTTACGGAAAAATGAAGCTCGGTTCACGCCTCACGTCTCACCTAGCAATCAGTCCCAAATACGTTAAGGTCTGAATTGCAAAAAGCAAATATTTAAATGTTTGCATGAAGAAAAAAATCTGTGGGCAGGAACAAATCTCTTGAGACATATGCTAACCATTAAAGATGATTAAGTCAAATATATTCAAACTAGCACTTAGGTTAAGCTAGTAAACAATTTAGTGTAGTAAAAAGACAAACCAAGACTTGATATTTACAATACTGTTAACTGAGAAGGAAGTAGTAAGAAGAATATAGAGAGAATTCCTATTTTTTAAATAATAGGAAACAGACTTCCTCTTCCCAGGATGGGATCTAGAGGCGTTCAGGACGGTCCAGCATTTGATATGCCGCTATAAGCTTTCCTACAATACAGCCTCTTAACAAGACTAGGCTGTCCTTAACCCCTGGTAATAGAATCGTTTACCTTTATACCAAGAAAGTTGGGATAGCACTAAAATCCGCATGTGGTGTGTGCCCAGGCCACCTTCAAGGAGTTTGTGCTGTGAGACCTAAGGTTCTTTATGAGGTGGTCTAAAGCAAAAAGACATGTCAGCCAGGCCTGGTTTTCTGTGTGGATATATGTCTGTTACAGGATCAAGTGCACTTTCCTTACCAAGGAGCAGAAAATCAAGCAGAGAGTCAGAAAGCTAAATTTAAGAAATGAAGCTTTTTTGAGTAATTTTTAAAAATCAAAAAGAAGGAAAAAAAAATGAAAAAGACTTGAAGAGGCATTTCACAGAAGAGAAAATACATGGGGCTTATAAATCAATAGAAACCTTGTGAGATACAAATTACTATCACAATGAGCTTGTTAAGTTACATCCATAAGATTTACAAAGTTAAGGAATCTAACAGCACCAGGTGCTAAAGAAGATCGTGTGAGCTCATTTCATGATCTGTAAACAGGCGCCCCTGCTTTAGAAAACAACCACACCTCACCAAGTTGAACATTTGCACACTTTGGACTCTAGCTTATGAGTCCACCTTCCAGCTATGTATCCAGTAAAGGCCTGCCTTTGTGTACCAGGAGATATGTACAAAAATGTTTATAGTAACGTCTTCATGATACTTATAACTGGAAAAACTGAAATGCCTTCCTGTCTACAGGACAGCATTTAAGTAAATTAGGTGTATTAACAGTAAGGAATATTATTCTGTAGTAAAAATATAAGTTAACCACAGCTACACCTGACAAGAAGAATGAATCTCTGAAAATATTAAAGAAAAAAAGTCCCAGGATATGATTGAGACTATTTTTATTGAGCTCAGAACCAAGCAAAACCAAAGAGCATCTTCTCAATGCATGTGTAAATGGTAAAACTAAAAGTGTGAAAAAAAAAAAAGATAAGCCAAAACAAACCTCTGAGAGGGAAACAGAGGGAGCAGATATCACGGACACATGGTTAGACGCTGGTTATTAGTAATGTTCAGGTTTTGGGGTTGTAGGTTTATGGTTATTTATTATGCTTCACAACTAGCTTAATATTACAGAGTTCTGTATGTATTACATATTATAAAAATAATAAAGGAAAGAATGGAATAATAAGCCAGAATGTGGGGTGCTGACTTTGTAGAT EMBV3_19222 CGATTCTTAAGGGCCCAGGATTTTCAGATGGTAGATGAGCACTGGCCTCACTTGGTCACC Gene BVV0102_056067 - 1 EMBV3_00947 GK000023.2:52015704-52050984 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35401 ATGGCCCGGATGGTGGCCACAGTGAAACAGGGTCAGCTGGAGCTACTGCGGAGACTCTTC Variant GeneID:509313|SMYD5:NM_001080248:4_cdna 544^648 2 EMBV3_38110 GeneID:509313 11 GENE SMYD5 NULL SMYD family member 5 EMBV3_02589 CAGCTGCAGCTGCTGCAGAGTGCGTCCACAGGTGCTAACACCTGAGGGGGCAGTGAATGA Variant GeneID:527118|LOC527118:XM_002688741:75_cdna 310^602 1 EMBV3_19279 GeneID:527118 7 GENE LOC527118 NULL similar to mCG5922 EMBV3_22399 GCACAGGCAAGCCGGTTCTCTCCAAACGAAGCCAGACAAATTGAGCCATCTGCTTTCTAT Gene GeneID:514470|DCDC2B:XM_002685615:272_cdna Constitutive 0 NULL GeneID:514470 2 GENE DCDC2B NULL doublecortin domain containing 2B EMBV3_34440 GGTGGGTTCCTGCATGACCGACCTGGTCAGGTTGGCAAAGATTCCTTTGGCAATGATTAT Variant GeneID:513276|RBKS:XM_002691453:286_cdna 99^231 2 EMBV3_39873 GeneID:513276 11 GENE RBKS NULL ribokinase EMBV3_06921 AAACCTGTTGCCCAACCGTGCCTACAAGTTCACTGTCAAGAGGGCGGAGAGCTACACTCT Gene GeneID:614565|C13H20orf195:NM_001079622:1276_cdna Constitutive 0 NULL GeneID:614565 13 GENE C13H20orf195 C20orf195 chromosome 20 open reading frame 195 ortholog EMBV3_03451 GGAGCAAGGCATGATCAACTTGTGGGCAATTCTGGGACTGGATGGCATGGAGATGAAGTT Gene BVT0102_120516 - 1 EMBV3_25379 GK000002.2:129437770-129501726 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106827 TCONS_00106829 TCONS_00106828 TCONS_00106830 1 XLOC_062898 NonCoding TCONS_00106828 XLOC_062898 NonCoding NonCoding - 2:129486631-129497214 - TSS78541 565 1 TCONS_00106828_2 70 0.886725663716814 2 0.946796446796447 3.36902808459722e-10 0 4.97185429116531e-09 4.51286377080542e-07 0 2.16241805903485e-07 0 0.00206229940989893 0 7.45501700441015e-10 0 0 7.6975009913344e-23 0 3.88795383096632e-08 0 0 0 4.87699711090254e-07 0 0 0 0 0 4.07662332264455e-07 4.19745616873305e-07 0 0 0 0 NM_001078069.2 PTPN18 Bos taurus protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18), mRNA. 3e-62 242 78.55 0.520353982300885 0 noncoding 0 0 1 1 0.0354177295010075 0.757482715978786 0.0264510771290146 0.6670723670482 TGGAGCTCTGGATTCCCAAGTAATATTCGTGCATGAATCAGACGTCCCTCCAGATGAAAGCTGCTGACCACAAGACGATAGACTCTAGACTGGCTGAAACCAGAAGGTTGTTGATGCTTGAAACTTCATCTCCATGCCATCCAGTCCCAGAATTGCCCACAAGTTGATCATGCCTTGCTCCTTGAACACTATAAAACTCCTCACTGTCCCCTACAGGGTGGGTCACACAGTCTTGAGGGCATTAGCCCACTGTGGCCGCCTTTGCCTGACAAACCACGAAAAGCTACTCTTTTCTATGTTACCCCAAATGCTGTCTCCATGTTTCTATTCAGGGAACAGAGCCTGAGTTATGGCAACAGATCCAATGTTTACATCTTTTCCTGTTTTAAGTTGAATTGAGTGTGTACGAGCTCAGCCATTTCAGTCGTGTCCGACTCTTTGTGACTCTATGGACTGTAGCTCACCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGAGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCTGACTCAGGGATCGAACCCGCGTC TCONS_00103945 r 5' 35283 TCONS_00103945 r 5' 25231 EMBV3_13812 GCACTTTTATGCCAAGAACGATTTTAGTGAAGGCTCCTTTCAGATGTAACCTTATGAGGG Gene GeneID:536671|ZFYVE16:XM_002689368:30_cdna Constitutive 0 NULL GeneID:536671 7 GENE ZFYVE16 NULL zinc finger, FYVE domain containing 16 EMBV3_00898 ATTTTTGGCTGTGCTGGGTCTTCGTTGTGATTCGGGCTTCTCTGTACTTCTGGCAAGCAG Gene GeneID:100126043|LOC100126043:XR_082712:213_cdna Constitutive 0 NULL GeneID:100126043 18 GENE LOC100126043 MGC166022 hypothetical LOC100126043 EMBV3_18554 CATCCAGATGGCAAGGGAGGAGGTGTTCTTGAAGAAGGGCAGAGGCTTCCGCTGTTAATA Gene GeneID:514989|SUPT16H:XM_002690734:443_cdna Constitutive 0 NULL GeneID:514989 10 GENE SUPT16H NULL suppressor of Ty 16 homolog (S. cerevisiae) EMBV3_34496 CCTGTTTCCCCTCTTCCGGCTGACCTGTGATTTAAACTGCTCTTACAGTTAATGCTTTGG Gene GeneID:523045|PSD2:XM_002689215:50_cdna Constitutive 2 NULL GeneID:523045 7 GENE PSD2 NULL pleckstrin and Sec7 domain containing 2 EMBV3_42331 CTGCTCGGGCCTTTGTCTGTTGTGGTGCACAGGCTTCTCACTGCAATGGCTTCACTTGTT Gene BVV0102_371327 + 0 NULL GK000024.2:7520027-7576789 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12721 GAAGATTGTTCTTGGATGGCGATCAACTGACCCTGGCTGACTGTAGTTTGTTACCCAAAC Gene GeneID:532777|CLIC2:NM_001081727:11_cdna UTR3_Alt 3 NULL GeneID:532777 X GENE CLIC2 MGC148419 chloride intracellular channel 2 EMBV3_42162 CTTCGTCGATGAGGCCAGAGATGCTTCCTTTGCTCTAACGGGTTACCTTGGGTTGCTTTT Gene BVT0102_065965 + 0 NULL GK000008.2:111899128-111916918 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229098 TCONS_00229097 TCONS_00229099 1 XLOC_138652 Coding TCONS_00229097 XLOC_138652 Coding Coding MEGF9 8:111914783-111928986 j TSS170632 1223 1 TCONS_00229097_2 74 4 0.914167018729756 0.00416653915930314 0.00370512292924182 0.00272514356819388 0.00279849971267097 0.000440745190866729 0.00105890652147504 0.0034096796158619 0.0028635276952571 0.00728367751621838 0.00058575009369086 0 0.00018945604555468 0.000822235842613634 0.00155077363470293 0.0019438997998593 0.00426282642988416 0.000853706557591863 0 0.00832119192145109 0.00664754070749797 0.00188939141800823 0.000712176331826221 0.000256696744509198 0.00142566515961021 0.00603981619029331 0.0047371485634534 0.0033700436979242 0.000134222381824906 0.000299727805952048 0.00037539789718512 XM_003582585.2 MEGF9 PREDICTED: Bos taurus multiple EGF-like-domains 9 (MEGF9), partial 0.0 1413 100.00 0.639411283728536 NM_001080497.2 MEGF9 Homo sapiens multiple EGF-like-domains 9 (MEGF9), mRNA. 1e-133 480 85.58 0.339329517579722 0 coding 0 0 0 0 -0.0800572791681088 0.512686879300018 -0.0299555695657878 0.532323164801717 CACATATTTCCCTTAAAATGGAGGTGCTTGTTTCAATTGCCAGGATAACAGCGAAGGGGATCACTGTGAAGAATGCACAGAAGGATTTTATCAGAGTCCTGATGGCTCGAAAGAATGTCTTCGCTGCCCTTGTTCAGCAGTGACATCTACAGGCAGTTGTATCATAAAGTTGGGTGAATCGGAACCTGAATGTGTCCAGTGTAAAGACGGTTACACAGGCCAGAACTGCAATGACTGTAACCACGGCTACTATAATTCTGACAGCATCTGTGTGGAGTGCCAGTGCCACGGCCACGTGGACCCAGTTAAGACTCCAAGGGTTTGTGAGCCCGAGAGCGGGGAGTGCATCAGCTGCCTCCACAACACCACCGGCTTTTGGTGTGAAAACTGCCTGGACGGTTACGATCGAGACCTCGAGGGAAACTGCATCACGAAAGGACATACGGTCAACATAGCACCTCTGATTATGAACATTCCCTGGTTCTTATATTTTGAGGTATGTGGGAAGGAGTTCAATTTATATATCACAAGGAAAGAAAGCTCCCACAAAAATTTCGGAAAACTAAAAAGCAACCCAAGGTAACCCGTTAGAGCAAAGGAAGCATCTCTGGCCTCATCGACGAAGAGCCTTTGGTCTGTTATGATCGTCTCGATAGGAGTTTGGGAGCTGAAACGAGTTTGGTGTGTGCAGGGGAGTGACGGGAGGTTAGTGTAAGTTTTCCCTCAACCTTGAGCCAGTGACTATGCCAAGGGAAGAAGCAGGAAGAGCACACTGGTTCACCTGAAGAAATCAAACGATACCACGTGAACTAAAAAGGCTACAGATCCCCAGAGTGTCAGAGGTCGAATGATGCTTTTTCAAAGGCCACTGGGAACCATCTGCAGTAACTGTACCAGCAGCTCTAGAACGCGAGACCAGGCCTGAGGCCTGCACTAGCCTGAGAGCTGACTGATTTAAAGCAACTTCATGCTAGGCACAAGCACTCTGTAATACGTTAAATTTCCGCCCAAGCAATTGGGAGTGTTTCTGAAACATTAAAATCGTATTTATGTCACTAAAATTCTAACGCACATCTTAAAAACATGTCTCATACATATGCTGGACTAGGCTTCATGATGCATTTCTAAATTTGTGTATGATTTGAATATAAGAAAGAATTTATACAAGAGTGTTATTTAAAATTATTAAAAAATAAATGTATATAATTTGTACCTGTTGTAGA EMBV3_10505 GCCGCGGCTCCTGGGCAGCTCCGGCGGGCGGTGGCACAAGATCTCTGCAAAGTAGCAGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19259 CAAACTGGCAACTTGTCCCTTCAATGCTCGCCATCAGGTTCCTCGGGCTGAAATCAGTCA Gene GeneID:506864|GTSF1:NM_001034273:25_cdna Constitutive 0 NULL GeneID:506864 5 GENE GTSF1 FAM112B MGC127830 gametocyte specific factor 1 EMBV3_20228 TTCCCATTTGTTAACTATGGTGTCCTATTAGTTACTGCTGAAGGAAAAGTTGGTCTGGCC Gene BVV0101_034824 + 0 NULL GK000003.2:77950528-77972151 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170340 TCONS_00173752 TCONS_00170347 TCONS_00170348 TCONS_00170343 TCONS_00173750 TCONS_00170344 TCONS_00173751 TCONS_00170342 TCONS_00170345 2 XLOC_103562 XLOC_104432 Coding TCONS_00170344 XLOC_103562 Coding Coding GNG12 3:77813377-77954368 j TSS127298 4157 3 TCONS_00170344_1 72 0.0401732018282415 4 0.97054401021349 0.00203447252361457 0.00160730160003372 0.00188640635861295 0.00144850594024842 0.00297230020201722 0.00111242534061274 0.00209422438853544 0.00163270885044178 0.00369493846563004 0.000884719868624603 0.000494422281897067 0.000624872872114633 0.000497581680354875 0.000308389256270658 0.00171256526679745 0.00448967957995936 0.00169491677073962 0.00359095381333736 3.71779534748046e-12 2.40560193313283e-06 3.98320932347057e-05 0.00139510022261692 0.000133656983599292 0.00175941112110014 0.000699862095117415 0.00186490480964016 6.99346183888871e-08 0.000226748000776098 0.000153208783044608 5.59760877792479e-08 NM_174785.2 G protein Bos taurus guanine nucleotide binding protein (G protein), gamma 12 4e-140 504 100.00 0.0668751503488092 NM_018841.5 G protein Homo sapiens guanine nucleotide binding protein (G protein), gamma 0.0 2895 75.46 0.988212653355785 TCONS_00170344_1 sp|Q28024|GBG12_BOVIN GBG12_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12; 6e-48 150 100.00 0.986111111111111 1 noncoding 1 0 1 0 -0.377605556021596 0.0308537562664388 -0.0492265495546946 0.338205397269737 GCAGATTCATTCCATCACCTAAAACCTGGTGACGGTGGGCCATATAGAGTCTTGCTGGTGAAAACCATTAACTGAAGATGTCGAGCAAGACAGCCAGTACCAACAACATTGCCCAGGCACGGAGGACTGTGCAGCAGTTGAGAATGGAAGCCTCCATTGAGAGAATAAAGGTTTCAAAGGCATCAGCAGACCTCATGTCCTACTGTGAGGAACATGCCAGGAATGACCCTCTGCTGATGGGGATACCAACTTCAGAAAACCCCTTCAAGGATAAGAAGACCTGCACCATCTTATAGAGAAGTAGTGAAGTGGATCCTCCCCTCTTCTCAACAAAGCAAATGATGAGCAGCTCCTTGAAAAGATTTACCTTCAGCTTATTTGGTAACCACTGCTAATAACTAAAATGCTCTTAACTTGGAGTTATGGACTCTGAAGTCTTTACCTTCCAAGTTTTTCTTTCCTTTTACTGAATTAATACAGAATAATAATCTTGTTTCCCATTTGTTAACTATGGTGTCCTATTAGTTACTGCTGAAGGAAAAGTTGGTCTGGCCTTTAAAAAGAAAACAAATATATCAGTGATCCAGTTAAAACCTAAATTACCTAAGCAGTCGTCTAGATTAAAATGCCAAGGATAACTGGTCCTAAAATTTTTGTCGTAGTCTATTCTTAAGAGTTGTGCCAATCTGTATAGTATATGTGGATGAGAAATGTTTTGTGTATATATATGTGTGTGTTTGTATATACACATCTCAAAGCTTATTTCCCAATTAAAATGTCTCTCCCTCCATACTATCAGTTCGACTCAAGAAGTTATACCTTTATCTCAAGCTGTGTGTAGGTAGAATTAAATTCTTTTCTTGTCGTTATTGTACAAAAAGAACACCCTACAGCCTATATTCATCGTAGTTGAGTAATGAAGTCATCTCTCTCCTCTTGAAACCGTGCTGACCTGCCAATCAAAATTTTTAAACTGAACTAAAAGCCCTTTTATAATATGAGCATTCTTTCACCAAGGGATTTCAGGTTTCAGCAATCCTGAATCTATGTAGGAAATGGGAGGCAGCCCTTGGGGGCACCCTAGGCAGCTGTGCCCCAGGGCTCATGGTCTCTGAACCAGGGGTAGACACCTGAAATTCCTACTGTAACGATGGGAACTAGACAGAGCGGCCATGAGCCCGGCCAAGAGAAGAGCAGGAATGCGTGAAAACCAGCTGCTCTTTGTGGCCTAACTTTGTGATTTAGCTCACTTTCTCTGCCTTCCCTCTTATCTTTCCTCTGCAGCCAGATCATGTCTTCAGAATTAATGTCCACCTCCCCATCCCCAAATGGGTAGATCATGGTGGGAAAGAAATATACAAAGAATGTAAAGGTATCGGACACATAAGCTCTTTTCAAGTATCTGCAGCATCTGCATCATCCCTGCCTGGTCCTCACACCATCAGAGGGGCTTGTTTCACTACTTGGGCTCACAGTTCCTTGATTTTCCTCTGGGCCTGGATATTACTGCCACACACACCCAGAATGGCTAGTGGGGATCCCCAAAGAAGGTTGTCTCCTGTGGCAGAGGGCATACTGTTAACTAAGAGGAGGAGAGGGTATTCCTAAACACTTATTTATGGGCCCAAACCATGCACCAGGCCTTTGATATTTTAATTCAAATTCCATTCATTAAAAATTACTAATGAAAAGTTAAAAGTATTCTCAGAAAGGATTCAACCCCAAGAAGGAATTATTTACAATGGTTTTTCCCTAGTTCTGTACAATCTTGCCCTGCAGTGCAAGCCTGTTTTTAAATCTAACACCTAAGCTTTGAGTATTATGTTAATTGTGGGTGAACAAATACAGTACTGTTTTCAGACTGCTCAAATCTATTCCGTATTTCTGCAAGTCACCTATCTAGCATTGTGAACTGCCCTCACTCCTCCAGGATCATGTGGAAATCATGCCACTGCCCTTACCTTCTTGTCATCCACACTTGGTTCTGCAAAGGGCCCAGTTTCCAAGTATATTATAGGCACCGTTGGTGGAGAAAGGTTTTTCCTTTCAAAAGGTGAAATTTGAAATATACATTAAGAAGACAACTTTACATGTACTGCATCACTTAATGAGACATTCTTTTTTTTTTAATAGGTGTATTTTTCTACTGATAAGTTTCAGAACACTAATCTTATTTTCACTCTGATTTTTACCATGTTCCTTTGAATATTTATAATGTAGCTTGTTACAAAATATTTTCATGAAATTACTTTTATTATACTGTTATATACACATTTTTGGTAGCAAGCATAGTTTATTCTTTCGTACTAAAACATGTTCTTTTCCCTATTAGAAAACAAGTATGGTTTGCTATATATTTGTTAATATGCTTGTAGTGGTAAGGAATGGACTTGAGGTCCCAGGAGATTTTTTTTATTTTTGCTAGCCAGATATCATAAAGGCTACAAGTATGAACATCATATAACTTCCTGACCAGGTGTAGGGCATGTTTAAGAAAAGTGATATCAAGTCCTTTGATGCTGGACCCAAGGGGGAAAAATTGTAGCTAAGTGTTGATTTACTTATTATGAGACGTCTATGTGAGAAAAATATAATATATGTATACATATATATGATATGCAGAAGTCACTTTTATTTATCAGGCTTTATTCTACTAGTAAAGCCACAGTTTAACTATTAGACAGCAGCTGGTTATAATGATGGACAAATGCCCAATGTGTTTTATTTTTTCCAAACTACCACTATAATGACACAATCACTTAAGTACATGCAACTTCCTGGCTTCATATCTATGAGGCTATTTAAATATGTTCACTATACTTTGTCTTTAATTCTGCCTCTATTAACAGTGATCTCTTTTTCCATTCTTGATTCTTCTTTAGTTCATCATTAATCTGTCCAATTGACGCCTCAGGACCATGGCAAGAATTTCATGACTCCAAAGTATTTTACAGACACACACTTTTTTTTTTTTTTTTTAACAGAGAGAAACACTTTCTATACCATGTGGTTCACAAGCTGTAGGTTTTTTCTAAAAAGAATCAGGTTTTTACATTTCCTTATTATTAAAATAAAAAGTGCCATACTTACCCCTTAAAGCAAAGACCTAATTTGCTTTCTCTCTATTGGGACTATTTTTGTACTTTACTAATCTTTTAACTATCCAAAAAAAAATTATACCAATGATTTAGTAATTTTGAGGCATAAGTTAGTTTAGGTAGTGGAAGATGTGCCAAACTTTCCCTCCAGATGCCTTTGTCTCAATTTGCAACTAAGGTAGCGTCATCTGAGTGATTACACTGAATTTTACTAAGAAGTGAATCACAGTACATGTCAGTCCTTTCTCAATAAATGTAATACCAGAGTGTGTTATGACTGTAGACTTTTTATGGTAGATCTGTTAATAGAAAAAAAAAATATATTGAATTAAGTAGAGTTATCTGTATGTTAAAATAGAGCACTTACCTAGAGCTGGGTGTCCTGGATCGCTGTCTAGCCAATCCTGTGTTCCTGTGTTGTGTGACTTTGGACAAGGCACTCCATCTCTCTGAGCCTCCATTTCACCATCTGTAAAATAAGGGGCTTGAAGTAGCTGATGGCTGATACCCTCCTGTTCCGTCCAGTGGCCTACCCCTCTACTGGTCCTGCCAACATGTTGGTGCTATACGCTGCTTCAAATATAAAATTGGTTTGTCTATTGTGTGTGCTCATTTAATAGCTTATGAAAGGCCTTTTTGTTATATGGCTTTTTTTTTCTAGTTTTATGAACTTGATTACTGTAATAAAGTCTTGTTTGTAGCCATGTAACTATAAACATAGTCTCTTGATGTCAGTAAATTTGCATTTGATATATTAGTTGATGGAATTGTTGTTTTAGGACATTCTTTGACTACTTATCTGTCCAGCATCTTATTAACCTAAATATTGTGATCGTTGTTTGGAAATCTGTTCTCTGGAAAGAATAAAAGCATTTACTTCACAGCTAATGTGTTTGCAGATTTGAAAAACAGTTTCATTAAAGCACCATTGCTCTCTTTACTGGGTCTGGCTCATTGAATCTTCCTACCCATATTTTGCTCAATAAACTTAACAGAAGACCAGTTCTCCTCCCTTTTTCCTGCACTCATTCAGTTAACATTTTCTGAGTACCTGTTAAG EMBV3_04430 AATGCTTTGAAGATGCATTGTAAATGCCCATTTTTGTAAGTTAATCATGGTTATATTGGG Gene GeneID:615136|LSM5:NM_001046553:60_cdna Constitutive 1 NULL GeneID:615136 4 GENE LSM5 MGC128153 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_02624 AGTCAACTTGCACGCGCCAAGACAGACCCTGAGAAAGTCTCAGCACTGGGATGAAATGAA Variant GeneID:508096|LOC508096:XM_002695799:366_cdna 436^508 1 EMBV3_32112 GeneID:508096 19 GENE LOC508096 NULL similar to hCG2036610 EMBV3_43184 TGCAGAAAAGAAGTCCCAAGAAAATAAAGGGACCGTGGTGAGGAGGTGCACGGCCCTGAC Variant GeneID:508051|WDR4:NM_001100320:17_cdna 166^309 2 EMBV3_39736 GeneID:508051 1 GENE WDR4 NULL WD repeat domain 4 EMBV3_34967 GCTCAGAACTCATTAGTGACACCTTTTCAGAAGGGACCAGAGAAACCTATGTCCCAGTCC Gene BVV0102_078180 + 0 NULL GK000005.2:116348341-116413863 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202030 1 XLOC_123675 NonCoding TCONS_00202030 XLOC_123675 NonCoding NonCoding - 5:116380927-116382018 - TSS151598 1091 2 TCONS_00202030_2 104 0.0494958753437214 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000173577086554056 8.19210370603088e-05 0.000750995129838534 0.00104096709063437 0 6.8994344626571e-05 0 0 0 0.000401302205290225 0.000529757207037642 0.000430257410992663 0 0 0 0 0 0 0 noncoding ACAGCAGGGATAAAAGCGCAGCGCACCGGAGCACTACAGGGACAGTTCTGAGGGGCTGGGGGTGGTAGGATGGGAGACCTTGTGTGTAAAGGGCAAGTAGAGGTGAGGAGGAGGGACGCAGCACCAGTGTGACCCTCGGCCTGCGTCCCCAGCCTAGCAGGCGCAGTTCTCCTCCCCAGATGCAGCAGAACAGCAGGCGCAACGCAGCCTGGCTGGGATTATCCAGGGCGGCCAGGCCCCGGGGTCGCCCCGACCACGGTCAACCCCAGCGGTATGACGTCCTCGCAGGCTGTCCCTGGGCCCCTCTGGACCTCAGGCTCCTCGTCGGTCAAACAGAGATCACACTCCTCTCGGGCAAAGTCAGCATCAGATGGAGGGCACCCGCACAAAGCACCTGGCACACAGCGAGTGCTCAGGGAGCGCCAGGTGCCAGGGCAATGAGTACTGTGCTTACGGGGTGGCGCTGCAGGCCCTTTGGGGCAGGGACTGTCTAACAGGGCAGAGGATGCTCAGAGGACATAGGAATGGGCTGACAGGGAAGTGGGGAGGGGTGCCAGGGAGGCTGAGCAAACAGGGCAGAGGTGCCTGGAGCAGATGGTCGCTCCGACCCCTCGCATTTCAGACACTCTGTGCCAGGTGACAGGCAGCCTGCCGGGCGGGCATGCAGCCGGGCACAGAGTAGGTGCTCAACCAACGTTTGCTGAATGGAGGAATGAGGATCCTTCAGTTTTTGCTCAGAACTCATTAGTGACACCTTTTCAGAAGAGACCAGAGAAACCTATGTCCCTGTCCAGCTCTGTGTTGTAGACACCCTCACCTTCACGCCCACCACCCTCATCCCCACTTGTGAGGAAAGCTTCATTCCAGGGCAGCCTGCCCGCCACAAAAAAGAGGATGCAAATTGATCCCCGCCCTCATCCCGGCCTCCAGGGTGTGGCCTGCTGAGGGGGTCTGGAAGCCTTGTGACCTCAGGTGGGTTGGGGGTGGGGGATATATCGGCTCTTTGGGACCCAATTTCCCCAACGGTGAATGAAGGCGGGGCCGTAGAATCTCCAAGGTGGACATTCCCTTCTCCAAAAGCTGCCGTCGCC TCONS_00196681 TCONS_00196682 . 5' 20762 TCONS_00196681 TCONS_00196682 . 5' 20762 EMBV3_39270 CACGTGATTACAGCACTCCTTGTGAAGAAGGAACTGGATGCCTTCCAGCCATACCCTATT Variant GeneID:513107|STYXL1:NM_001101968:164_cdna 190^465 2 EMBV3_24311 GeneID:513107 25 GENE STYXL1 MGC179477 serine/threonine/tyrosine interacting-like 1 EMBV3_03680 ATCCTTGTTTCTCTGTCCATCTCAAATCGTGTATATGTGTATGTGTGCGAGTGCAGGCGC Gene GeneID:523578|MOSPD1:NM_001038137:14_cdna UTR3_Alt 2 NULL GeneID:523578 X GENE MOSPD1 MGC134397 motile sperm domain containing 1 EMBV3_37154 GGGGAAATGAAGAGGCTAGACTCAGATCAGCTCTGTCGAAACGCCTTACAAACCCTTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19451 TCCCCAGGCTGCCAAGCAAATCAAAGATGGTGCCTAGCGCCCCTGTGATTGACCTGACCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14716 TCTTCAGCTTTAGCCAGATGCCCACAAGCCATTTTTCCCTCACTCCCCCGACTCATTCTA Gene BVT0101_026025 + 0 NULL GK000004.2:16910760-17047159 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183292 1 XLOC_111123 NonCoding TCONS_00183292 XLOC_111123 NonCoding NonCoding GLCCI1 4:16995616-17170711 x TSS136823 994 1 TCONS_00183292_1 46 0.045271629778672 4 0.994345894205398 1.03969166674018e-231 6.45676704999804e-317 5.32445005977718e-05 4.62815067831347e-141 0 2.33638122184744e-46 0 5.80052326333414e-57 7.72380507235133e-54 0 0 0 7.09402970605738e-39 5.36260069973814e-147 0.000108588052261139 0 0 0 0 0 0 0 0 0 0 0 8.52698041895545e-101 0 0 0 XR_230826.1 LOC100848017 PREDICTED: Bos taurus uncharacterized LOC100848017 (LOC100848017), 3e-46 190 100.00 0.104627766599598 XM_005249606.1 GLCCI1 PREDICTED: Homo sapiens glucocorticoid induced transcript 1 (GLCCI1), transcript variant X1, mRNA. 5e-24 116 92.41 0.0784708249496982 0 noncoding 0 0 0 0 -0.223416002543535 0.145593350556459 0.0758632355455633 0.484114739978298 GAGAGGCCTGAGCAGGGAAGACGAAGGCGTGACGAGGTCTGCAAGAGGACAAGGGTGGAGGCGCACCTCGGGCCGCCTGCCTGAAGAGCCCCGGTGGTGGAAGCCGGACCGTCCGCCGAGCTGAGAGGCAGGAATACCGGGCAGTGGACTGCAGGGGCGGAGCGGTGCTCATTGCTGGGAACAGAAAAAAGACTTGGATGGAACTTCAGACATCACGTTTCTTAGCTTGTGATGGAAAGTGTGTAAATTAAATGTCAAGAGGAAACCAGGCTGTGGAAATCTAATCCAGTCAGTGTACCTCCAACCCGAGAGCTGAATTCATCCTTGTCAGGGCACACGTGAAACAGATGATTTTGGCACAGATATATTTGACAGCGGCATAGGGACTGATCTTGATCCGGTAGCCTACAAAATACAAGAGCAACAGAAGCTCCTAAGGAAGAAGCTGGCTTGAGCTGTACATGAATCCAGCTCATCTCTGCTCTGTTTCATCACAACAAACATAGAGCTGTGCAGACTGCCCTTTCCTGCTGCCAACTACAAACTGCCACTCTGTGACCTTGTTTTCACATCAAGGATCCTCTTCAGCTTTAGCCAGATGCCCACAAGCCATTTTTCCCTCACTCCCCCGACTCATTCTAGAAGAATGTGCTCTAACCTAGCCTCCATAAACCTCACGGAGATGGTTCCCAGTAAGTTCATCTACCCTGGCCATCCTCTGCTATTGACCCAAATCTAAAAAGACCTCTTGCTCCAGGCAGCTCCCTGGTGCAGCACCCTAGTACAACACCTTCTCTTCTGTGTTTCAGCAGAAACATATGGGTGTTTATTGGGCATCAGAATTTACTGGGCACCTATCACGTGTCAGGCTTAGCACCAGGCACTGGTTTTGCCATAGTGAATAAACTGTGTTTATATCATGAACAATAGACATATAGTATGAGCAGAAGAGCAGTAGCTAAGCCCTTTTTTTTTTAATTGAGAAATTGTAAAC TCONS_00180934 TCONS_00180935 TCONS_00180936 TCONS_00180937 TCONS_00180938 r 5' 50969 TCONS_00180939 TCONS_00180939 TCONS_00180943 r 5' 0 EMBV3_42382 TTCTTTGTCAGCCTGCTCTTGACTGCCAGACTTTGGGGAGCCACTCTCCTCTGCACTTGA Gene GeneID:281983|PLAUR:NM_174423:44_cdna Constitutive 0 NULL GeneID:281983 18 GENE PLAUR NULL plasminogen activator, urokinase receptor EMBV3_40648 GATCCTTGGCTCAGTCTGGCTCCCTGATATGCCTACTTTCCATGCAGATTTGGGGGTGTA Gene GeneID:510596|CHMP6:NM_001075457:72_cdna UTR3_Alt 3 NULL GeneID:510596 19 GENE CHMP6 MGC139458 chromatin modifying protein 6 EMBV3_09593 CTCTGTCTTTTACACAGTGGTCATCCCCATGCTGAACCCAGTGATCTACAGCCTCAGGAA Gene GeneID:784595|LOC784595:XM_002683787:2_cdna Constitutive 0 NULL GeneID:784595 20 GENE LOC784595 NULL similar to olfactory receptor Olfr1174 EMBV3_13470 TGGTGTGCCTTGAGTGCCCTCTCGCCTAACTCCTTCACGGTTAAAGAAGTACCAGAAGGC Gene BVT0102_123226 - 1 EMBV3_33953 GK000002.2:131596963-131624284 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05723 ATGGAAACCAACAGCTGCCGTGTACATTATTTTCCAAGAGGGCTAAGCTCTGAACCTAGC Gene BVV0102_108434 + 1 EMBV3_05959 GK000001.2:64149061-64357118 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05113 TTACCTTTTCATATGTCAACAACATGGCCCGAGTAGGGACCCTGATCCTCTGTCTCCACG Gene GeneID:616901|LASS6:XM_002685310:147_cdna Constitutive 0 NULL GeneID:616901 2 GENE LASS6 NULL LAG1 homolog, ceramide synthase 6 EMBV3_37333 AAGTCTGGACGTAGACACACAAAGACTAACAGAGCCTCTCCCCCTCCTTACTTCATGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39920 TGGCAGAAAGATTAAATTTCAGGCTCTTACCACTTGGGGGCACTCCAGCTTCCAGACTCC Gene BVV0102_160729 + 0 NULL GK000015.2:53668828-53678627 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061782 TCONS_00061785 TCONS_00059577 TCONS_00061772 TCONS_00061779 TCONS_00061784 TCONS_00061771 TCONS_00061778 TCONS_00061775 TCONS_00061773 TCONS_00061765 TCONS_00061776 TCONS_00061770 TCONS_00061780 TCONS_00061777 TCONS_00061767 TCONS_00061768 TCONS_00061781 TCONS_00061783 TCONS_00061786 TCONS_00061766 TCONS_00061769 TCONS_00061774 2 XLOC_037138 XLOC_036459 Coding TCONS_00061776 XLOC_037138 Coding Coding FAM168A 15:53669511-53876530 j TSS45952 9615 1 TCONS_00061776_4 235 0.0538741549661986 9 0.953598237834391 0.00025374871859051 2.56004029146501e-28 0.000124170580191594 2.01233791695048e-91 1.38617863712691e-05 3.44846095458737e-06 0.000104104907140315 7.32832479463779e-05 2.04909031364164e-06 2.12943901536744e-47 6.82618578919086e-19 4.30490260415192e-75 1.75322275779687e-05 2.67918874536508e-22 4.22934778239244e-08 0.000217348858899906 3.28502245356452e-35 3.18076423192545e-05 0.00010598293953589 0.000218317088787143 7.59733400283765e-05 1.10925613422875e-95 8.65986609397571e-25 0.000225617537836207 1.56903865929839e-141 3.49697535618479e-13 5.9703465104742e-05 0.000101467641751321 9.21299130216675e-33 1.0039304062279e-100 XM_005216227.1 FAM168A PREDICTED: Bos taurus family with sequence similarity 168, member A (FAM168A), transcript variant X2, mRNA. 0.0 3036 98.45 0.178055122204888 XM_005273852.1 FAM168A PREDICTED: Homo sapiens family with sequence similarity 168, member A (FAM168A), transcript variant X1, mRNA. 0.0 4430 76.01 0.639313572542902 TCONS_00061776_4 sp|Q92567|F168A_HUMAN F168A_HUMAN Protein FAM168A; 2e-139 395 95.90 0.995744680851064 1 coding 0 0 0 0 -0.10636893927321 0.488252337631252 -0.0188684250293885 0.773202435813221 GCTCAAGCTGCCAAGTCGTCTAGTTTTGCAGGGAGACCAGAAGGAAGCTGCTGCATTAGTTCTGGTGCGAGACAGTGGTAAACGGTTATTTCGAAGAGTACAGAATCGCAGGTGATCTTGCCCATCTAGGCCTGTACTCGGCTGGGTGGCATATTTCCTTCCCTTTCCCCTCTCTTTCACTTCTTTATTTTAACATGGAGGAAGAACTGAGAACTGCATCTCCCAGCATTTCGCAGGGACCACACTCCCTGGGAACTGTAGTACCAGCCCAGCGTCCCCTGCCCCCACCCGTCGGGCTCCTCGGCGGCTACTGCAGAGGATTCAGAGCCGAGTCGCTGAGGAGGAGGCGGCTCCTGGTCCCTGCGCGCCATCCGCCACCTTACTGGACACGGGCGACGGAGCGAGAGCGTCGCCTCTGTAGCCTTCAGAGAAGACAAGGGCATCGCCGCCTCAGCTGCCGCCGCCGCCGTTTTCGCCTGCAGCGGCTCGCCGGATTCTCAGTTGTCCACAATGAACCCTGTTTATAGCCCCGTGCAGCCTGGGGCTCCTTATGGCAACCCGAAGAACATGGCCTACACAGGTTACCCCACAGCCTATCCAGCTGCGGCCCCTGCCTACAACCCCAGCCTGTACCCCACCAATAGCCCCAGTTATGCTCCAGCAACTCTGCTGATGAAACAGGCCTGGCCACAGAACTCGTCTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAGTGGACACCGGGACCGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGATATACTGCGGGGACACCATACAAGGTCCCACCGACCCAGAGTAATACTGCTCCGCCCCCCTACTCCCCTTCACCCAACCCCTACCAGACGGCCATGTATCCAATCAGAAGTGCCTACCCCCAGCAGAATCTGTATGCCCAGGGAGCTTACTATACACAGCCGGTGTATGCTGCCCAGCCCCATGTCATCCACCACACCACGGTCGTCCAGCCCAACAGCATTCCCTCTGCCATCTACCCGGCGCCTGTCGCCGCTCCCAGGACCAACGGCGTGGCCATGGGAATGGTGGCCGGCACCACCATGGCGATGTCAGCAGGTACCCTGCTGACTGCACCCCAGCACACCGCGATCGGGGCACACCCTGTCTCCATGCCAACATACAGGGCCCAAGGGACCCCTGCGTACAGCTATGTGCCTCCGCACTGGTAAAGCCTGCGTCCATCCAAACCTGGAGTCACACATTGTATGCAACTACTCAAGTCTTACACAGGTGCTGGAGCAGCTCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTTATGCATCTTTAACGGTTTTGGTTTTTATTTTTGGTTTTTGTAAAAGCTGCTTTTTCTAATCTCCTGCCTCTCCCCACTGTCCCCCTCTGAGCCGCTGCCCTCGCAGCTCCACCCTTCTCCTACCTGACCAGGCACATCCTCTCTGCTCCTTTCCTTCCCCAAGCATTCAGTCCTGGGAGCCTAGTCTAGCGGCAGGCAGAGAGTGGGGTCTGTTGCAGTGGTTCTGCTGAAGGTGCGATTTCCTTTGAAGAGCATAGTGGATGTGACCCTTGGGTCCAGGGTAGGAACTCAGAACTGTTAAGCAAGCCACATCTCTGAGGGATGGTTTCTTTTTCGATTTTTCTCAAGCAGGATTAGTTTAAGACACTGCTGTATCCTGACACAAATGAAATATCTTCTGATATTTCTGAGAACCATCGCAACAGACCAAGAACAAAACCACCTGATTAGGTAGGAGCGTTCATAGCAGCTTAATAATACCCCAGATGAGAACCTGGGAAAACCAGATTTTTTCTTTGGGAGAACTTGAGGGAGGGTGGGGGGAGGGGCGCACTGTGGGAAGGCAGAGGGAAGAGAGTTGAGAGGCCCTTGCCTGCTGGCTTTGGCTTGTAAGGTCTCTGGCCGAATTGTCTGGGCCTGGACCCTCTAATTTGCACAGTGATGTTAACTGACCTGGCACTTCCTCAGAAGGTGATTTTTGACCTCAGACCTGCCAAGCAGCTGCAGGACGGTGGGATCCTAGCCCCCCAAAGCCTCGGAGGCCAAGTGCCCAGTGTACTCTAGACCTTGGCCTCTGAGCCTTCATGGATCCACTCTGGTGAGGAGCTTGCTCCTCAGTAGAGTGGAAACCTGTGGCATTTCTCTCCCTTCCCTTTGTCCTTCCCAGAGCCAGGGCTCACCCGTCTGTCCATGGCGCTGGCAGACAGGCTAAGTTCTTGGTTACCTTGTGCCATTCATGGCCAAAGTGAAGGAACCACATTCCAGGTGGGTGCTGGTGGCTCTGGAGGTCAGGATAGTGAAGGAGAAACAATAGCAATAAACATTTCATCGACTCATGGAACTGAAGGGACCTTAGCAATCATCTCATCCATTCCCCTATTTGACAGATAAGGAAGCTGAGGCCCAGAGAAGAGGAAAGGACTTCCCTAGACCTTGCAGTAAATTAGCATTAAATGCAACCTTCCTGCCTGGGGCATGCTGTCCACAAAAATTTACCTAGGGATGGATTGGCTTGGCTTTGTAAAAATGAAGCCAGCAGTGCCCACACCTGGTGAGCTCTGGAACAGTCTCTGGGCTTTTGTTTCTGCTCTTTTCCTCCATGGATTTCAAAGGCAGAGGTTGAAGACTTGGCCGAGGTCACATAGGGGCAGATGGCGGGAACAGAAATTGCAAATGAGGAAATAGCATTTGGAAATTCTGTGAAGACATGTGGACCTCTCATCCTATACCTGACTCCAGCCCTTGGAGGAGCAGGTGGACTGGCTGAAAAGGAGTCCATGCTGTTAAGACAGTAGCCCCTCATCCTGAGAGGAGAGGAGGAAACATGGGCTCTCTGGGGAGAAGAGGGACCCCTGGGTCAGGAGGCCCCATTGGTCTCAGCCAGGAGCCCAGCTGTCTAACACTGCCCGCCCTGCACCCGGCACTTGGAGGGGTTAGCAGCCCCTTTGGGGATGGTTGGTGGCGGGGGGTGGGGGGGTGGGGTGGCATGCACAGGAACATTTTACTGTACAAAATGGGATCATTGATGACATTTAGAACTTCTAAATAACTCTCTTCATTTTAAATTCATGCATACGTGGATATATCCCTACCCCTACCTCCCATGTCTCCCTAAAGGAGGAAATAATCAGGAAACCCCTGGGCCAGGAGGACCTCAGAGGCTATCTGGCTGTTCCCAGGGGGGCACAGCCCAGCAGCATCCTCGACCTGGGAAATGCAGGACCAGTAAGGAAAAGCCCCGCTGTTCTAAATGGTCTGCTCGGGGGTGCTGAAAAGGTTTTGTTTTAAAACAATAGAAAGTTTTCCAGTGTTAATCCTTTTTTTTCTTCTTTTTTTGGGCAAATACCTCCTCCTACTCTCTGGTTGTATAAGGGTGGGTGAAGGTTGTTTTAGATTATGTCATACATGCTTAGAAAATGCCAAAATAATAATAATGATTATAATAATAATAGGAAACATTTGCATTTGTCAGGTGCTTCATAGACTTCAGAGCACTTCACAGCCTTTAATTTACTGACCCTGAGGGAAAGACAAGGTCAGGGTTATTTCACCCATTTGACAAATGAAGAAACTGGTCCTATTTAATAGCAGGAAAGGGAACTTCTCTCTTAGAGAAAAAGTGAGCAGAATGCTGGCACCCCAAAAGGCTCCCCTGAACCCTGCTGCCTCCAGATAGGCTGGGGCAGAACCAGAGGAGGGGAAAGGAGATCTAGGAATTACCTTTTTACCTTTCTTCATTCTGTACCAGTATGTAAAAACCAACATCTAGTACCTCAGTTTTTCACAAAGCAATTTCATATCCATCATCTGGCTTAACCCCGTGAAACAGATGATTCTCTCATTTGATCCATGAGGAAACTGAGACTTGGAAAAGCAGAGTGACTTGCTCGTAAGTGGCAGAGCCATTTGAATCTTAGTCTGCGGTCTCTTTCCCTCCAGTCTGAATCCACACACAGGCTTGTGGACTGAAACGCGATGCTGTGCACCCTCTCCTGGCCCTTGTATGTAATTCAAGATCAAGGACAGACCCCAAGGCAAAAACAAGGTGTGGAAAGGCTGGGGTCTGGAAGAACCCAGGCATAGCACCCCTTTTGCGGGCTGAGCACCGGAGCCCCAGTTCAGCTGGCCTCACCCTCTTGCTTTGACGGAGATCCACAAGCCTGGCCAAGCTTGGGGAGTCATTGCAGAGGAACTGAGCCCAGGAGAACGAGGCAGTCGTGTGCCTGTGGTAGGATGAGCACACGTGGGATCACGGGCATCCATCAGGAGGTACCATGAGCATCATCCACAGATACTGGATGGCCCAGTGGTCAAGCTGGACAGAAGGTCAGAGCTTGAGGGGCCCTGTCATTTTAGGAAGTCCAGCAAGCCAGAGAGGACAAGGGGTGCACCCACATGACATTCGAGCTGCAGCATGGCACCAGCAAAGCCCTCTCCACCCCATTCCACTGCTTCTCACCAGTGCTACAAGCTTGGTGGGCAGGGTTAGGGGTACAGGTGGTTCCAGTCACCAGCCAACCCTCACGGCTTTCCCCACTTGTACCTGCCTCCCTCTCCTTAGCCTGGGGCCCAGGAAGCTGGAGTCTGGAAGCTGGAGTGCCCCCAAGTGGTAAGAGCCTGAAATTTAATCTTTCTGCCACATTTTGGAAAAATTGATTTCCTTTCTTCCCCGCAAGACAAGACAGTTGCTGCTCTTCCTCTCTCTCTCCTGGCAGTGACTGTAAAGTGAATATCCCCCTCCCTATATATTGAAAAAGGACACTCACCTGTCCAGTTTATTGTCTGTATACGAAGTACTTTGATATTGATTGCCAAAATTCCCATTTTATAGATAGAAAAAACTAAGTCTCTGAAAGCTTAAGAGACTTGCCAAAGGTCACATAGCTCATGAGAGAAAGAGCCAAGATTTGAACTCTTCAAATCCTCTGCTCTTTCTGCTGACACCTGCAAACCTTGGTGGCCAGCATGCAGAAGGGATGGGCTACCTGTCTGCCCCTAAACAGAGGAACGCTCCAGGGAAACCTGGGAAGTCAGTCTTCCCTGCTGAGCAGATTTTTATGAGGAGCCCTGGAAACCCAGAGGCAGTTCCAGCTGGCAGCACTCGAAGGACAGGAATTTGCAATAAGAGGCCTAACTTGAGCAAAGCACTTTGGGGTCATGATGCCTAGGACTGAAGATGTGTTCAGGGGCAGCCCCAGGCACCTGTCCATTGAAAGACCTATGTCCTTAGGAAGCCTGTGTACCCTTGCTTTCTGACCCTGGAGAGCCGGCCCACTATCCAGACCCAGTGAGTTGGCACTTCCAGGGGACTTGATGTAGCCCTGAATGCTCAAAAGTACACCTGAATCCAGACCCTGGATTTGTTTTTCCCAAGAGTGAGGACCAGGATCTAGAGAGACACTGTGCAGTCCTTCCACCTCATCCCAGCTCTTACCCTTGGCCACCCAAAGTGTTCCAGAGATCTGGGAGTGTGTCTTCAGAGAGGCTGGCTTTGTTCCAAGTACCCTTCAGAAATGAATCACACGGAGCATAGGAGTAGTGCAGATCCTTTGGTCACAGAGTTCTGATGTCCTCACTGTGCAGACAGGACTCAGCCAGAGGTCCAGAGAGGCGCTGGCTGAATCAGGCCTGGAGCCCTGCATGTCAGACCCTCAGCTCTGCTCTGAGGGAGGCGAGAGGGAGGCCTAGAGGGCACAGGTCTTGGTCACAGCACTGTGGCTGGATCAGTCACTGAGATGTCACCATGGCATTTGCTCCTCAATTGCAGTTCAAAGTACATGTGGAAGCTCTGCTTTTCACCCTGTATTCCACAGCACTGTAGGGCATGTGGTCCCCAGCTGATTGCCAAGCTTGGGAATCCAGAGGGGGCAGGTTGGGCAGTGGAGGGGCAGGCTCCATGCCAGTGTCCAGCCCCAGGAGAATCCAGGCTAGACTTACCTCCAAAAGCTGGATCACGGTGGAGACCCAGCCAGGCTAACATCGGGTTCCACAGCTGAGCCTGAGAGAGCTCAGCCTCCTTTGGGTGTGCCAGGTTGGTGGCAGGATTTGTCCTTTACCTGTCCACGTCCCCCTCTAGAAAACCTGTTTCTGAAATTAGGCATTACATGGTTCTAGGGCCTGGCCTTTAAATTTCCTGGCAGGCCAGTTTCAACATTCCATAACCAATCTTGCCTGAGCCAGACTTGGGTCTCACTCCCTCACTTTCTCCAATGGGTATTTTCTACCTTGTGTACTGCTGAGTCCAGCCCAGTAGCCAGGTGATTGGGACTGGCTGCCACAAAGCCAGAAAGGGAAACTAGAACGCTTGCTTCCCTGTGGCTGCATCCATAGTCCCTGGGTCTTCTTGCTGTGGCAGTGAGGCCCTGTACCCAGTCCAGCTCCTGGTAGAGGGGCTATTTTCCTTTTTTGAAGAGAACACATATAACAGCTTTGCTGATAAGTACCAGCCCATAGGTCTCAAAAGGGTGAAGTCATCTTTGGGCCTGACCCCAGCAAGACCAGCATCTCCAGGCTCCAGCCTTCCTCCTTGTGCCTGACAGTCAGGGAAAGAGTGGGACTGGCCAGAGACCACCTTCTCGGGTCAGCCAGCTTGTCTGGATCTATGGTGGGACTGCAGCTCTTCCTTACCCAAGGGGAGGTAAGGCCAGGCCTCTAGCAACGTGGCGTTGTCTGTCATGACCTTTAAAGGCCCAAGGGCCTGTCCCTGTCTCCTGACTAAAAGGCATCTGCATCCCTGTTCATATCACACAACAGAGAAACTTGTTCTCGTGGCATGTACCATCCCTGTGAGAGAGCGTTGTATATGATTTTGTATTTTTTAATTCATTTTAATCTACAGGTTGGAATCTAGTTTTTAAATTTTATTGGAACTCACATTTTAAAAAGAAAAACATTTAAAATAATAATAATAAACCTTTGACCGGTGTCTTCCAAGTAGTTTGAGCAAAGAACTTATAGGTGTTTTCAAAACACAGCCTGGAGTGTAAAGAGTGGAAAGCCCCGCGGCCTCGCTTGTGTGTATGAAGTGTAAATCTGGTTTTGTTCTGTTGTTTTGGATTCTTTTGGGTTTTTGTTCCGTTTTGTTTTGAAGATCAGATAGTGATCACCCTGAAAGATTGAAGCCAAGAATTTGTAACTATGATATTTACTGTAAGCTGTAGAACATTGAATAACTATTAAAAAAGTTTCCAAAAAAAAAAAGTCTGGAGTGACCAGACTGGTGGTTCTTGGGAGAGGGAGACACAGACACCTGTTGGGTTGGTGAGTGTCCCCTGGGCTTCTGCCAAGTTGATTCTAAACTTGTTTTCACCAGTCAAGCGATACCTACAGATACGCTGCATCTCCGGGTCAGGGGCCGGGGCTAAGGTGTGTGATACAGGAGTGCAGGGGAGCCATGAATGATGGAGGCTGCATCTGCCGAGTGCCCACCGTGTGGCCGGTAATCCTCATGGCAGGACAGGAGGTGAGCCCTGTGGGTAGCCCTGGCCTTGGGAGGGGGAGCAGCTGAGGAGGGCGAGTACCTTGGCCAAGGTTACAGAGCTAGTGAGGGGCAGAGCTGGAACTTACACTTGGTCTGGCTCCAAAGCACAGGTACCCAGCCCCAAGTTCTCCTGCCCACTCTGGAGGAGGCAGTGCCTACATCCACTTAACAGGGCTAAGCGGTCTGTGGGCCCAGAAGGATGGCTGAGGGTGATAATGTGGTCTCCATCCATGTCGTCGTCACGTGCTATCAGCTTTATTTATGTCCAAAACATCTCTAATCTCCCTTCTGGGCAAAGCCACTGTCCTGGTCCAGAGCTGGGTTTCCTCCCTGGTCATCGCGGCAACTGTTCCTCCTAGGGCCTGGCTCCTGCCGTCCACGCCCTACCAGCCTCCCAAGTATTCAGCTTCCTCAAGTGGGGAGAATCCTTGAGGCCCAAAGAGGCTAAGTGCCCTGGCTGTAACTAACACTCTGGGGCCCTCTCCGCCAGACTGTACCCCGGGCCTCCACAGAACCTCCCTCCCCTGTGGGGGCAGAAAGCTGTGTCAGGTGTGGTCGGGGACGATGTTCCTGGGCTCTGTCACAGCAGTTCCTCCTGGACAGGAAGGGGACTTTGTCCAGGGACTTGGCTCCAGGAGCAGGTGGGAGGCGGAGACCTGGGCCGAGGCACCCGCCATTCTAGCCCACGGAGGAGGGGCAGCAGAGTGAGAAGAGGTCAAGCTCAGAACTGTCCTCATTGGCCACCCAGAGCCCCACCTTGTCCTCTAGCTCCCACCCTGCCAGCAGCCTCGGCCTACCTTCAGCTCAAGAGTAGGTTTTAGAGCCAGGAAAGCTTCCAGGTGAGAGGGGGGTCCTCAGGGTCAACCATATCAGACGCACCCCTAGCTGGTCCTCAGCTCATCTCCCTTTTGGGAGGTGGCTTCAGTATCCCCAAGGATCAAGTGAAGAGACTGGGGCCAGAGCCATTCCTTTTTCTTACCTTCCAGCAAGCAGGAAATTGGGGTGGCAGGCGTGGTCTGGAGGTGACCAGTGCCTATTACCCCAGGGGCCAGCACTGAGATGGGTGTCCATTACCTCACCTGGGAAGCTCAGACCCAGCCTCAGTCTCCACCCTCACTGGCATCTGTATGTGCCTCATCCCAGAGATCAGAGTCCAGCTTCCCTCTGGGAACGGAGGCCAGAGGGTGGGAGGGTCAGCCTCCCCTTTGACCCAGGGCACTATCTCATCCTCATCTCAGGGTGTCATCCAGGCACTCGGTGAAGTGGGGTTGGTTGGCTCGGGGCAGCCAAGTCTAAGAAGCCACACCCTGGCGAGTAGGGACACCAACAGCAGCACGGTGGCCCCAGGGAACATTCCCTGGGTGCACTGGTGCCCGTTGGTCCCCTACAACACTGTTCTAGACTCTCGATCTCTAGATGATGCTGAACCTCTGATGCTCCAGAAAATTCCTCTTGATGTCCAGCCTGTATCCTTCCCTCCCCTCTTGAGAGCAGGTGATACTTTGTCTCCTGAATCCTCAGAGGTGCCCTCCCTTTCCTGCCCACCTGAGAAGCTGCAGAGAGAAGCCTGTGCTCTAGAGAGGTGAGAGGAAGGGAGAGGTTGCGTCTCCACTTGAATCTGCCCAGCCTCCCCTCAGGACAGGAGTCTTCACAGCTGCCAGGCTGGGCCCCACCATGGCTTCTGCCCCATGTGAAGTCAGGCTTCGGGCATATGCCCAGCGTGGCCACTGCCGTCTCCCAGGAGCAAGCCTGAGCCTTCCCAGGGTGTCCCCTTCCACCCCCACCCCGGATTCCACCAGGCATCACTTCTTGGTTCTTCAGCCTCCTTGAGCCTCTTTGCCATTAGTGTTTAAATACGTCTCCTTCCTCCAATACAAAACACCAAAAGAACCTGGAATTAACTAAAAACCCCCTCTCCCTGAAGCCTGTACCTATGGTTGGACTGCAGCTCTTCCTTACCCAAGGGCAGATAAGGCCAGATGACCTGCGAGGCCACCTCTGGCCCCACTTCATCTGGTGCCCCACCTGCCAAACAGCAGACACTGCCAGGGGAGGGATGGCATGT EMBV3_24228 TTGGAAAGCTCCATCCAAGTTCCTCTCTCTGCCTTGCCCTGACAGTACTCTCTTGAGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02538 TTCAGTCGTAGGGGACTCACACGCACTGTACAAGCGTCCCAAGTTGGATTCTGAATACTA Gene GeneID:616371|LOC616371:NM_001101256:5_cdna Constitutive 0 NULL GeneID:616371 8 GENE LOC616371 NULL hypothetical LOC616371 EMBV3_33919 CAAACGGTATGAAGAACAACACTTCGGTCCTTTCTTCAGTTTGAAGTTCCAGGAATTAAA Gene GeneID:790244|TMEM170A:NM_001099213:130_cdna Constitutive 1 NULL GeneID:790244 18 GENE TMEM170A MGC159606 TMEM170 transmembrane protein 170A EMBV3_11389 ATAGTAGAGACACTTCCCCTTCAAGGGACGATTGAATAGTCTTCCTGCTGCTGGTGTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09422 AGGCTGCCCCTTGCCTCCTGCTTCCAGAATGCCCATTTCAGTACATAAAAGCTAAAAGGC Gene BVT0102_078454 + 1 EMBV3_10652 GK000017.2:63559647-63561377 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075835 TCONS_00077720 TCONS_00077719 TCONS_00077723 TCONS_00077722 TCONS_00077729 TCONS_00077725 TCONS_00077727 TCONS_00077724 TCONS_00075836 TCONS_00077730 TCONS_00077721 TCONS_00077728 TCONS_00075833 TCONS_00077718 TCONS_00075834 TCONS_00077726 2 XLOC_046664 XLOC_047131 Coding TCONS_00075834 XLOC_046664 Coding Coding TPCN1 17:63498271-63561362 j TSS57069 5181 1 TCONS_00075834_6 758 27 0.918307180218735 0.00021979163587009 4.08812838985579e-05 0.000493580085891854 0.000183200229667487 0.000133636466143649 4.50617944899962e-05 8.41492801650416e-05 4.48186773624877e-05 0.000704308138880355 2.31915116377472e-19 1.65417533002002e-84 6.00249360007277e-55 3.13692981442885e-05 0.000449550722798177 1.72324423838874e-05 2.0594847794829e-06 6.70900827526277e-38 2.20422096589351e-05 7.84355228267141e-06 5.06399183885481e-32 6.5285084010402e-36 2.56003486083199e-26 3.74582747549106e-93 4.74213448137669e-109 0.000381576496762068 0.000122887162725553 0.00012265075303798 2.08269236319773e-29 1.51881192697929e-38 2.27484151021758e-05 XM_005195075.1 TPCN1 PREDICTED: Bos taurus two pore segment channel 1 (TPCN1), 0.0 8799 99.08 0.959853310171782 NM_017901.4 TPCN1 Homo sapiens two pore segment channel 1 (TPCN1), transcript variant 0.0 3139 82.20 0.601042269832079 TCONS_00075834_6 sp|Q9ULQ1|TPC1_HUMAN TPC1_HUMAN Two pore calcium channel protein 1; 0.0 1345 92.82 0.970976253298153 1 coding 1 1 1 1 -0.131374077043288 0.75876551846106 0.0127120049039906 0.801547230941845 AGCTGCAACAGCTCCGGGCTCGGGGCTTTGGCGGCTGCACCGGCGGGCTGTACTGTGCTGTGCGGACCCCGGCGGTCGGTCCGGGTTGCTGGGGCGGCGCGTGTAAGAATTCGAGGCGTGTGAGGGATGGTCAGAGGAGAGGGCAGAGAAGATGCTGCTGATGGAGGAGTTTCTGAGAAGCACCACGGGGCCAGTGGCTTTGACTGGGAGCTCAAAGCAGAGACTATTTAAAGCCTTGGACATCACCTCCTGAGGCCTGCAGGAGTGAAGAGCATGGCTGTGAGTTTAGATGACGACGTTCCCCTCATCCTGACCTTGGATGAGGGTGGCAGCGCCCCACTGGCTCCCTCCAACGGCCTGGGCCCAGATGATCTGCCCAGCAGAAGAAGGCGAGAATAACGACAAGTTCTTCACCCACCCCAAGAACGCCAAAGCTCTGGCGGCCTACCTCTTCGCACACAACCACCTCTTCTACCTGATGGAGCTGTCCGCGGCCTTGCTCCTGCTGCTGCTCTCCCTGTGCGAGGCTCCCGCCGTCCCCGCGCTCCGGCTGGGCATTTACGTCCACGCAACCCTGGAGCTGTTCGCCCTGGTGGTGGTCGTGTTTGAACTCTGCATGAAGTTGCGGTGGCTGGGCCTTCACACCTTCATCCGGCACAGAAGGACCATGGTCAAGACCTCCGTGCTGGTGGTGCAGTTCGTGGAGGCCATCGTGGTGTTGGTACGGCAGACGTCACACATGCGGGTGACCCGGGCGCTGCGCTGCATCTTCCTGGTGGACTGTCGGTACTGCGGCGGCGTCCGGCGCAACCTGCGTCAGATGTTTCAGTCCCTGCCGCCCTTCATGGACATCCTCCTGCTTCTCCTCTTCTTCATGATCATTTTCGCCATCCTCGGTTTCTACTTATTCTCCCCTAATCCTTCAGACCCCTACTTCAGCACCCTGGAGAACAGCATCATCAGTCTGTTTGTCCTTCTGACCACCGCCAACTTCCCAGACGTGATGATGCCCTCCTACTCCCGGAACCCCTGGTCCTGCGTCTTCTTCATCGTGTACCTCTCCATTGAGCTGTACTTTATCATGAACCTGCTCCTGGCCGTGGTATTTGACACCTTCAATGACATCGAGAAACGCAAGTTCAAGTCTTTGCTGCTACACAAGCGAACTGCCATCCAGCACGCCTACCGCCTGCTTGTCAGCCAGCGGAGGCCTGCCGGCATCTCCTACAGGCAGTTCGAAGGCCTGATGCGTTTCTACAAGCCCCGGATGAGTGCGGGGGAGCGCTATCTCACCTTCAAGGCCCTGAATCAGAGCAACACGCCACTGCTCAGCCTGAAGGACTTTCATGATATTTATGAAGTTGCCGCCTTAAAGTGGAAGGCAAAGAGAAATAGAGAACACTGGTTTGATGAGCTTCCCAGGACAGCATTCCTCATCTTCAAAGGAATTAATATCCTTGTGAAGTCCAAGGCCTTCCAGTATTTCATGTATTTGGTGGTAGCGGTCAACGGGGTCTGGATCCTCGTGGAGACCTTCATGCTGAAAGGTGGGAACTTCGTCTCCAGGCACGTGCCGTGGAGTCACCTCGTCTTTCTGACTATCTATGCGGTAGAGCTGTTCCTGAAAGTTGCCGGCCTGGGCCCCATTGAGTACCTGTCCTCAGGATGGAACCTGTTCGACTTCTCCGTCACAGCCTTTGCCTTCCTGGGACTGCTGGCTCTGGCCTTCAACATGGAGCCCTTCTACTTCATAGTGGTCCTGCGTCCCCTCCAGCTGCTGAGGTTGTTTAAGCTGAAGAAGCGTTACCGCAACGTGCTGGACACCATGTTTGAGCTGCTGCCCCGGATGGCCAGCCTGGGCCTGACTCTGCTCATCTTCTACTACTCCTTCGCCATCGTGGGCATGGAATTCTTCTATGGAATCCTCTACCCCAACTGCTGCAATACAAGCACAGTGGCAGACGCCTACCGCTGGCTGAACCACTCCGTGGGCAACAGGACCGTCGTGGAGGAGGGCTATTACTATCTCAATAATTTTGACAACATCCTGAACAGCTTTGTGACCTTGTTCGAGCTCACGGTTGTCAACAACTGGTACATCATCATGGAAGGTGTCACCTCCCAGACCTCGCACTGGAGCCGCCTCTACTTCATGACCTTCTACATCGTGACCATGGTGGTGATGACCATCATTGTGGCCTTCATCCTCGAAGCCTTTGTCTTCCGAATGAACTACAGCCGCAAGAACCAGGACTCGGAAGTGGACGACGGCATCACCCTGGAGAAGGAGCTCTCCAAAGACGAGCTGGTCGCAGTTCTGAAGCTCTACCGGGAGGCAGGGGGAGCCAACTCAGACATTGCCCAGCTGCTCAAGATCCTCTCCCAGCTGGAGAGATACGAGCAAAATACCTTGGTGTTTCTGGGACGGAGATCAAGGACCAAAAGCGACCTGAGCCTAAAGATGTACCAAGAGGAGATTCAGGAGTGGTATGAGGAACATGCCCGCAAGCAGGAGGAACGACAGCTCAGCAGCTGCGTGGTCCCTGCCACCCAGCAGCCTCCAGGCAGCCGCCAGCGCTCCCAGACCATCACCTAAGCCCAGCCTGCAAAAGCCATCTCTTCTATGCAATAACACAATAGTATTATTTTACTACAATGTATCAAAGTAATGTATGTGTATATATGTATATGTTATATATATGTATACACATCCATATATATATGCACATATTTATATACAGAAAGGAGAGAAAGGCTGACAAGATGGGGTTTGGTTTATAATCGCCTTACCCTGTTTAACCCTGGAAGTCGGCTTCGTCTCGGGGGCGGTCAGGCCACCAAGAGCGGCTCTTAACGTGGAAGGCTCCAGAAGGCCCCTTCACAAGAGCACGTGAATAGGGCTGGCCTTCACAGTGGGCCCGCGTGCCTGTCGCACTGTCTTCCTGACGCTGCTCTCAGAATCCTTCCCTGCCCGGCAGCCTCCCCACTGACCTGCCCTACGGCCCAGGGCTCCTGTGTCCTGCTTTGGGGACAAAACCACTTAGGAAGGAAAGAGCCCACATCCTCAGGATGGTATTTCTCCAGATGTGATGATCATGGAATGGGTGTTCCCTTGGGAAACCAGTACCCAGCAAGCACCTGCCGGAACGAGTGATCCGGGGCCATGGGTACTCCATGTGGTCAGATCTCAGCCAGCGCCGGGCGGTCAGAGATTCTGTATCCTGGCTCCATGAGCCTTCTCACCTACCGTAAGTTTTAACCCTTGTTGCTGAAAATGCTTCTAAGATGGTCCATAGGAGGAGAACAGGCCAGAGGCCAGGCCAGTGGCTACCACCCCAGACCAAGTCCTAAAGTGAACGGGCTTTCTCCTTAAATCCTTTTGCCTTGGGATTGTCCTGTTCAAGCAAAAACATATTTTGGTTAATTCAGGATTCTGCCAAAGACCGCAGCAGGTCCTTCACATGTGTGCGTGCTGAGGAAAGGGAACAAAAAGCACAGAGGCTCACCTCGGGCCATCCACGGCCGCCCAACTCGTTGGCCCCCTTGGCCAGCTCTGCCCTCACCTTGAGCAAGTCACTCCCCGTGGACTTGACTGAGGTGGGAGCGGGGACTCGGCTCGCTCCAAGGTTTCCCCATCCCGGGAGTAGGTTCAGATAGCCCCTCGGTTTCCCGGGGACCTTGGGCGAATCCTGAGATTGGAGTGCCTTCGGGGCGTGAATGCACGGCAGGTGGGGTTAGCAGTGGTGGCTCCCGGGCTGCACACCCGGTGCAGGAGGCAGCATGCAGGGAGGACGGGGCAGGGGGAGGAGCCCCCGCTGGGCGTCCTGCTCCAACCGCAGCTCTCCAGCTGCCTCCATGAGCTAGAAAGGCGGTAGGGGGCGGGGGTGGGGTGGAGTGCAGAGACTCCGCCCTCCCCGCATTCTCTTTCCAGCAGGGCAGGACCCGGCTCCCCTACCCATCTCCACGGCCAAGTCTTGACTGTGGCCTCGGAGGGTTGATCGCCAGAGCCAGCATCCCATAGCTCTGCCCCTCATCAGGGGAGGAGTGGTGGTGTTTTTTTTTTTTTAAGCACAGCCCTTTAGGAAAACAAACCAATCACTGAGAACCACTGAGGTTTCCACCAGGAATCAGGAGACGGACATTGTCTTCCTCATCTCTGGGGAGCGACAGGCTGCTGTGGGCAGCTTGGCACCAGGCCCAGGCCTGGACCCCTTCCCCGCTCCAGAGAAGGAACTTTATTTGCACAACCGGGTGCCTTTTAGCTTTTATGTACTGAAATGGGCATTCTGGAAGCAGGAGGCAAGGGGCAGCCTTGAAAGGAGGGCATGAGTCCTCCGATCTCAGCATCTGCCCTCAGAAGGGGGTCCCAGGGAGGCTGAGTGTACCCCACGCCCACCCTCAGGGTGATGGCTGCTACCAGGAAGAGTGGAGTTGAGTCCAGGCTCCCCAGCCATCCTGCGAAAGGCCCTGTTTCAGTCAGGAACGGGCTGGAGGCCAAGGGGCAGCAGTGCGGATGGCCCGACCCCAGCCCCCGGTGGGCGCCCTCGTCACTGAGGCTAAGGACAGCTGCCCGTGGGGTCACGGGGGCTCCTCAGGCGGACCCTCCCACTCACACACAGGCCACCGAGCAGGGAGCGAGTGTCACTCAGGGCTGTGAGCTCACCCAGCTCAGACACTCTCACCTCAGCTTGGTGACACCGACGTGAGACGCGCCAGCCTGCTCTGGGTCCCTACCACCTATCAGTCAGCGTCTGATGGCCCTGTGCCGTGACCCAGCTTTGGGAGGGGGACGCCATCCGGCCCCTCCTCCTTGCTTCCCTCCCCTAACCCAGCCTTACTCCACACCACGTGACAATCATTTTGTATCGGTAGCGGGAACGACGCTGTAAGGTTTTGTACGTCGGCGATTTGTTACCTAGAAAACCCACCGTGCTGCGGATTTCTGGCATATTAATAAAGAGCCTCCGCTTTGTACGTGTGGCTGCCGCCTCGTGACTTCCAGCAGGCACCACGCGGTGGCTTCCATGATCGTGGGAAGCAGGAACAGGACCCAGCCGTGCCAGTCCATGGCACCACCTCAGCCCCACCCCTAGACGCGCCACAAAGTCCAGATCCGTCAGGCCCAAGAACCTTCGGCCCTGGATCCAACTGCCTGTCACCCTGGCCCGGGTTAAGAAGAAC EMBV3_31450 CTAGCCGCATGAAAGCTTTAAGTTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGG Gene BVV0102_089841 + 0 NULL GK000012.2:71670787-71903904 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022895 1 XLOC_013565 NonCoding TCONS_00022895 XLOC_013565 NonCoding NonCoding - 10:87215349-87220175 - TSS16785 4826 1 TCONS_00022895_5 154 0.999171156237049 1 0 1.57732261374093e-05 1.29927330130029e-05 1.32990573478007e-05 3.03582643571296e-06 7.95136623824791e-06 2.86362043214976e-06 2.42054773329235e-06 5.62389470728264e-06 5.92210875854391e-06 0.000254544433029669 0.000305944280177154 0.000117560310430686 2.53654570079822e-05 5.38438455733832e-05 1.07882290071628e-05 0.00109872190992971 0.000445257214358796 0.00080801827837914 1.18775518736231e-05 1.23010430466775e-05 1.60562612133676e-06 0.00101750068762907 0.000680446554682069 0.000975367596242452 6.94135601564397e-06 7.31718577111903e-06 9.79441837276018e-06 0.000702617848523246 0.000365427337986479 0.00110278676599476 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1413 90.04 0.215499378367178 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 8e-23 114 64.98 0.117695814338997 0 noncoding 1 1 1 1 1.05789475784859 0.046984737242554 0.21681114338649 0.0263634394330927 GTGTAATAAAGTTTTATTAAAGTATAGAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCCCCTTGCTAGTGTTAGCAATAAAGTTATATACTCTCCAATGAACCCAAAGAATGTCTGGATGTTGTAAAGACCTCACCAGGCCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGTTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTCTTATATAATCCTAAGGAATGTAGACAAAGAAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCATCGTTCTCTTTCCATAACTGCTTCCGAGCTGACAAGGGGTGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTATTTGGAGGAAGATGCAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAGTTACAGATGCAGGCAACATAGTCATTAAAACAAGTTAAAATTGAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAGCGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAATAAGAGGCATTGCATGTGATTGTTGTCGAAGGTATTCACAGACATGGAGAAGGTCTTTTCCTTGAAATGGAGATGTCCACCATGGGAAGCCTTCCACTGATGAAGAGGGGAGTGTTCCACAGACCCAGCAGTTAGATCCATTGTGGAATGCAGTGTAGGAGTGAGCCGGACAGGAAGGCATTGTCTTGAGGATCAAATGGCAGACTCAGGATTTTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATTCACTGCCCTTTGCTTAATTCTAGAGCTCGGCTCAGAGCCACAAGCTCTGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCGTAAGCTGCTTTACACTTTTCATCCTGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCCTCCCGAGCTGCATAAAGTTAGGAATTGAGAACAATCGTGAACAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATATTTAAGAAGCCTACTGTCTGTCATCAAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAATAAGGTTTCATCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACGTGAAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTGCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCCATTTGGACCTGCTGAGTTTCAGCTATAAGTTTATCTAAAGGCCAGGCAAGTTCCCCGTAACCCGGAATCCAAATGCAACAGTAACCTAAGATTCCCAAAAATCCTCTCAATTGTCTTAAAGTCATAGGTAAGGGATGATTTAGTATAGGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAATTTTAAGAAATCTTCTGAGGCTCGCAAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACCGCTTCAGAGCTATTAAAGTTTTGTAGATCCTGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCATGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGCCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCACCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCTCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCATGGGGTGTAAAGGAACTACAGCCTCATTTACTATTCGTAAATCTTTAACTAGTCTCTATTTACTATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGATTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGAAGGGTTTTAACCCTTCCTTAACCTCAGGTTTCAGTGGATACTGCTTCTTATGTGGGAATATGTGCGGGTCTTTGAGCTTAACAACTACAGGAATAGAATTTTGTGCTCAACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTGGTTCAACTAAAGGAAGAGAAAGGCAGGGCTCCATATTCATAAAAACAGAAGCATGGACCTTGCTAAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCTTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCAGATCAGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAAAAAGTTGCCCCAGTGTCTAAAAGGAAATCGACGGATTGGCCCCCCACATTTATTAATACCCGGGGCTCCTCAGGGGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCTGATCCCGGAGACCTACGCCTCTGGGGGCAGTCTATCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCCGGGGGGTGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGTAATAGCAAGCCCGTCCCTTTTCACCTGGACCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCAAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATGATAGACTGTCTGAGCTAGTCGTAACAGAGTATCTAAAGACTAATTTGGTCCATACGCCCGTTTTAATAGCTTACAGTGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCATTTTTGGGATCAATCTCAGTGAATCTGAGAAGGCCTTCTCTCAATCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCACCTGATTCCCAGTGGGGAGGGCCGCTGTTTCATTCTCCCTCTTCCCTACTGATTCATTACCAAGCCATTCATCTCCAGAAGCAACCACTTTTCCAAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTCAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTAATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAAAGAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCAGTGGGTGTTTCATAAACAGGCAACAGCTTGTGTGGCTGTTTCTCAGTCCCTCTGGCTGCTCTGCACATATGATCCCAGGAATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATAGTCTCAGTTTCTACTGAAACCAGAGCAGTCTGAGGTCGTACTGAGATAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCGACTGAGACCAAGACAACCCTTCTGAGGGGGGTTCTCTGGCTTTCAGTTTGCTCAACTTGGAGCCCCAGGTACCAGGGCAAAGTAGGAGGACAGGAGGGAGCTGAAGATTTCACACCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGTTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGTAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCATTCGCCGTCCTCCAATGGATACCATGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGAAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAGAAAAAAGCGACCAGCACCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGATGGTACACCAAAAGCTTTTCCTTCCTGGTCAGACTTAGTCTGTCCCTTACCGACGCAGGCG TCONS_00015253 TCONS_00015255 TCONS_00015256 TCONS_00015257 TCONS_00015258 TCONS_00015259 TCONS_00015260 . 3' 12983 TCONS_00015253 TCONS_00015255 TCONS_00015256 TCONS_00015257 TCONS_00015258 TCONS_00015259 TCONS_00015260 . 3' 17808 EMBV3_32565 AGATCGGCCCCGGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCAGACCCTGAGAAAAA Gene GeneID:782067|PITPNC1:XR_084547:181_cdna Constitutive 0 NULL GeneID:782067 19 PSEUDO PITPNC1 NULL phosphatidylinositol transfer protein, cytoplasmic 1 EMBV3_20323 GTGCGGAAACATCCGCTCTCTCTTCAGTCATCTTGGTTGTGGGCAGAGACGATTTCCTGT Gene GeneID:100297567|LOC100297567:XM_002688755:117_cdna Constitutive 0 NULL GeneID:100297567 7 GENE LOC100297567 NULL hypothetical protein LOC100297567 EMBV3_33625 CGAAAAGTAGTACTTCTGAAGTTTATGCCAGGGGAGGCAATGCTGGGGTTTCACTTGGGG Gene GeneID:505560|PYGB:NM_001035270:17_cdna Constitutive 0 NULL GeneID:505560 13 GENE PYGB MGC128680 phosphorylase, glycogen; brain EMBV3_21423 GCTGCTTGGTGGGAGGACTGGCTTCCTAAAACCACTATGACCTTGACCAAACTAGACAAC Gene GeneID:782446|DIO1:NM_001122593:124_cdna UTR3_Alt 2 NULL GeneID:782446 3 GENE DIO1 NULL deiodinase, iodothyronine, type I EMBV3_20469 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33433 ATTCCCACCACCCCTTTTCAGTCTTCATGCCCCTTCCACTTTGGCTAGTTGATTTTGGGC Gene GeneID:786493|IL1F7:XM_002691397:335_cdna Constitutive 0 NULL GeneID:786493 11 GENE IL1F7 NULL interleukin 1 family, member 7 (zeta) EMBV3_41741 CCATGCTTGCCCTGGCGATGGTTAGTCTGGAAATGGAGAAACTCATTCCTGATTGGCTTC Gene GeneID:504847|CCNI:NM_001083373:41_cdna UTR3_Alt 2 NULL GeneID:504847 6 GENE CCNI MGC138097 cyclin I EMBV3_09825 AAGTGTCTCTGTCACATCCCCTTTGGGATCTCTCGTGACCTCGGAATGCTTGCCTACAGC Gene BVT0102_185798 + 0 NULL GK000005.2:75909086-75927673 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37272 GTGATTGATCTGACGAAAGACGACCTGTCAAACTGCAGCACAGAAAGCCCAGTATCCACC Gene GeneID:529852|ATF7IP2:XM_002697960:674_cdna Constitutive 0 NULL GeneID:529852 25 GENE ATF7IP2 NULL activating transcription factor 7 interacting protein 2 EMBV3_35592 CCAGGTGAGCCAGTCAATGATTTCTTCAACAGGGCTGCCTGCTAAGAGATGTGTCTTACG Variant GeneID:520049|WEE2:XM_002687075:235_cdna 378^578 2 EMBV3_03083 GeneID:520049 4 GENE WEE2 NULL WEE1 homolog 2 (S. pombe) EMBV3_41727 ATGTCCGGGAATGCCTGCAGAAAGGCCTGAAGGAAAGTCCTGTGATTCCTCTGGTGGAAA Gene GeneID:617564|DHDH:NM_001076469:412_cdna Constitutive 2 NULL GeneID:617564 18 GENE DHDH MGC139501 dihydrodiol dehydrogenase (dimeric) EMBV3_22481 TTTCCCCTACTTGAAAAGTTTCAATTCATGAAAAATGAAAATGGACACAGACCTATTGCA Gene BVV0102_060812 + 0 NULL GK000017.2:30095716-30106648 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076903 TCONS_00076909 TCONS_00076911 TCONS_00076916 TCONS_00076904 TCONS_00076902 TCONS_00076908 TCONS_00076905 TCONS_00076910 TCONS_00076913 TCONS_00076914 TCONS_00076906 TCONS_00076901 TCONS_00076912 TCONS_00076907 TCONS_00076915 1 XLOC_046938 Coding TCONS_00076913 XLOC_046938 Coding Coding C17H4orf29 17:30104455-30143971 j TSS57631 4102 1 TCONS_00076913_2 464 0.029985372988786 13 0.896520308743515 0.0036673427842158 0.00344359955457631 0.0041614219253699 0.0012699424206777 0.00236883733625186 0.000419335392295689 0.000802553777154722 0.00155824484933138 0.00405245106205387 0.00020209134835627 8.75154960514337e-22 3.13044009849853e-40 6.23926188366564e-05 0.00034707065280811 0.000926158642485213 0.00232552713122227 0.00123193364402819 0.00139511496784884 1.343219844236e-09 0.000933069488628686 0.000613899100081091 0.00101722377123372 0.00060436665217748 0.000140737194324861 0.00278785365979066 0.00440639227852932 0.00259660257628087 6.90701686828451e-24 0.000172523063905297 0.000101914115297154 XM_005217561.1 C17H4orf29 PREDICTED: Bos taurus chromosome 17 open reading frame, human C4orf29 (C17H4orf29), transcript variant X5, mRNA. 0.0 6956 100.00 0.940029254022428 XM_005263240.1 C4orf29 PREDICTED: Homo sapiens chromosome 4 open reading frame 29 (C4orf29), transcript variant X3, mRNA. 0.0 2399 88.79 0.455387615797172 TCONS_00076913_2 sp|Q8C1A9|CD029_MOUSE CD029_MOUSE Uncharacterized protein C4orf29 homolog; 0.0 902 91.81 0.997844827586207 2 coding 0 0 0 0 -0.356195385888645 0.208164322995214 -0.0476111918107658 0.488122487617796 TCCTCCTCTCGAGTCCGAGCCTCTCCGCCTCCAGGGAGGGTTGGGGGCGTGTCCAAACAGCCACTCTGCCCAGAGTTCATCCTCCTCCCTACACGGCTCTGTCGTCTACCTCTCGCTTCTCAGTTTCTGGGGAGACTGTTGTCACTGCGTTTGGGGCTCAGAAGGACGGCGAGTCCCAGGAGCCTAGGGAGCCGTGGCGCTGGGAGTCTCGGCCAGCTGGACAGCAGGCGTCCGCCAAGCGGCCACTGAGTGAGTAGCTGTTCCAGGCCGCGCTTCCCAAGCCTCTTGCAGCGCTTGCCTACGTGCCAGGAGATGTTTGTTTGCTACTGATGGGTGTGAGCAAGTTAGATATTCTATACCGGAGACTACTCCTTACAAAACTTTTTATCAGAGGATGGGGAAGGCCAGAGGATCTCAAAAGACTCTTTGAATTCAGAAAGATTATTGGAAATCGAGAAAGATGTCAGAATCTGGTTTCAAGTGATTATCCAGTGTACATCGATAAGATTGAAGAGCAATCAGATTGTAAGATCCTAGATGGACACTTTGTTTCCCCCATGGCCCATTATGTGCCTGATATCATGCCAGTTGAATCTGTTATTGCTAGGTTCCAATTTATTGTGCCTAAAGAGTGGAATAGCAAATACAGACCTGTATGCATTCATCTTGCTGGAACAGGAGATCATCATTACTGGAGACGACGAACACTAATGGCTCGTCCTATGATTAAAGAAGCCCGAATGGCCTCTTTGCTGTTAGAAAACCCTTATTATGGCTGCAGGAAACCCAAGGACCAAATAAGGTCCAGCTTAAAAAACGTGTCCGACCTTTTTGTGATGGGAGGAGCTCTCGTTTTAGAGTCTGCAGCTCTCTTGCACTGGCTAGAGAGGGAGGGTTATGGACCTCTAGGAATGACCGGAATATCCATGGGAGGACACATGGCTTCCTTAGCAGTATCCAACTGGCCTAAGCCCATGCCATTGATTCCATGTCTGTCGTGGTCCACAGCATCTGGGGTCTTCACTACGGGCGTGCTAAGTAAATCAATTAATTGGAGGGAACTAGAAAAGCAGTATTATACACAGACAGTTTATGAAGAAGAAATTATTCACATGCTTGAATACTGTGGAACAGATTCTTTCAAAATGGGACAAGAGTTCGTGAAACGCTTCCCTAGCAGTGCAGACAAGCTAACTAACCTTAATCTGGTTTCTAGAACTTTAAATTTAGATATGACGGACCAAGTTGTGTCCCAAAAACCTGTTGAGTGCCATAAATCTAGTAAAACATCTATCAGTGCCACATCAGAAGGACTCTTGTTACAAGATACCTCTAAGATGGACTGCTTCAATCACACACTTTCAACCAACAAAAGTAGTTATACAAGTTGCAGTCCTCAGTCATGCCACCTACTCAGTAAAGAACAAAGAAGAAACAATCTTCAGAAAGAATCTTTAATATTTATGAAAGGAGTTATGGACGAATGTACTCACGTAGCAAATTTCTCAGTTCCAGTTGACCCAAGCCTCATCATAGTGGTTCAAGCCAAAGAAGATGCCTATATTCCACGAACAGGAGTTCGAAGTCTGCAAGAAATTTGGCCTGGTTGTGAAATCCGATATCTAGAAGGGGGTCATATTAGTGCTTATCTTTTTAAACAAGGACTCTTCAGGCGAGCCATCTATGATGCATTTGAACGCTTCCTCCATAAATACGCCAACTAATGGGATCACTCTGTGCAGCCAGTGGAGCCATCATGTTTCTCACAAAAGGAGCTCCACCCTTTGATGATGTGAAGAACAAGCGCAGACAGCACTATATACTCTACCTGCTGTCAGTTGAGCCTGGAATTTATATTACAAATCAGTCAACTGTTATCTTTAAATACATTTGAATAATTCTAAACCAACATTTGGTGAAATAATGTTAAATATTTTGTTAGTTTGTGGGAGTCCCATAAAAATCAATTATCTATTCTCTTGTTATTTATGAAAACTTTACATTTTTATTATGAATAATTTATTGATTTAAAATAAAGGCATTCATAGAAACCCTTTTGGTTTTTAAAGAACTGCTAAATCAAACTTGGTTTGTAATATGTCAGCCTGTGTTGTACATATTCCCTTACATGGTATTTCTATTATTGACTTGATTTGAGAAACATGTTTCTTCTATGGATCCATAGTGAATTTATAATCCTATTTTCAATACTAATTTTCTGCCATGGATAATTCTGTGTAAAATCAGTGTTAATGTTAACTTTGAATTCTAAGAAATCCTGATTGCTTTGTATTTAAGTGCTTTTAATAATTGAATGTGAGAATGAAGATAAGATGCATAAGACTTTAAAACTTTGCCAAATATGAGGTTAGAAAAAAAAAATGCCAAACATATTTCCCCTACTTGAAAAGTTTCAATTCATGAAAAATGAAAATGGACACAGACCTATTGCATTACTTGATAACAATTTCTTAACATTTTCTTGTATACATACTTAGAGTTTGCTAAACATCTAACTTTAAGCCAGATACTTAAACAGCTTTGACTTTTTAATTTCAGAAATTAATGGCCACTTATAAAATTGATTTGTCCCATATACACTTCACTTTATAGAAAAGATATAATAACTAGTAACTTTTAAACCTTTTTAAAAAGAAGTATTATATGGTTACACTTGGTGCTTTCTTTTTATGTTAAACTTCTGAAGCCAAGAGCTAAAATGTTTTTTAAAAGTAGAAGATATTTTGGTAGGAATAAATGTATTTGAGTTGCATTTGTTTGAAGTATGTGTTGTCTGTGGGTTACTTTATTATAAGTAGTCGTACTCTAGTAAGGATATTTGAATTATAAGGTGCTTTTGCAGCCTTTTTAAAGGAGATTTTATTTGTCCTTATAATGCCTCCATCACCTTAATTTTTAAAAACTATTTTTAAATGATTAACGTGAAGTCACCAATGGCATACAATGTTGTAAATTCTGTAAAACTGCTTTGACATAATGAACAAACATGGTTTGAGCTGTAAAATTTTACTTGTTTAGATTAGAACCTTTATACTGACAGTATGAAATTACTAAAGTTCTCCAACAAAATATTCTTTAAAGATAAACTTGTTGGTTAACTGAAATACAAGTATTTTCTTATGTATTTAGTGAGGTGATTGAATGCTTTCTGAGCAATGGCTTGAGCAAACCCAGTACTTTATTTTTCACATAAATATTTCCTATAAGCAATAATGTACATAATAATGTATGTAACTTTCTATTTGTAAAAGAATAAAATTCATTTAATTTTAATAAACTCTTAGGCATAACTAATTTCTCCTAAATAAATGTGAAAAAAGGTATTTTTAAAAATTTCTTCTCTTAGTCAGATGTTTTAAGAACATATCCACACAACTACCTAAAGAAATGTTCTCATTTTTAAGATTGGGTACGTAACTTGCTAGAAATTCATTTAGCCCAGAGCTGCAAACTGACAGTCAATTCAGGCCAGCTTGGCCCACAATTGTTTTATTCAGTGTGCATAACTCCAAAACTTCTGAATTCAGAAAGTCTTTGTATTGGGTATGCAGTCCCCCGTTTGCCATAGCTCACCAGACTCCAGGCTCTTACATGAGACTACTTCACTACTTTGTGTTTCCCACTTGGCCCTGAAGACATCTGAGCTTGAGACCTCAGTTTAGATCTGTGGTTTAAAAAAATTCCAAGATAAAACTGTAAGTACTGTTGAATCATTTTAGCATATGCATTTTTAGATTGTGTCTTATGAATGTAAATTTTAATGTGGTGCTTTCTTTTGTAAAGATCATTGAATTATTAACTCTGTAACTGAAATTTTAAAATCATTTCCAGATATTTTATATTCACAATAAAAGTCTATTTAAAAAATTACTTGTTATGTTCAAGAGGTTTTATTCTAAATACAGAACACCCATGTCACATTTGATTAACATGGCCTAATTTGGGACTTCCCTGGCCGTCCAGTGGTTTAAGACTCTGCACTTCCACTGCAGGAGTCATAGGTCCCATCCCTGCCTGGGGAACTAAGATCCCACAAGCTGTGGGGCACAGCCAAAAAAAAAAAAAATCTTTAAAGAACATT EMBV3_32504 TGTCTACAGCAGTGGGCAGTAGATCAAGATAAGTTGGTTGATATGTCTGCAGCACCATGC Gene GeneID:514221|COQ10B:NM_001075654:104_cdna Constitutive 0 NULL GeneID:514221 2 GENE COQ10B MGC139232 coenzyme Q10 homolog B (S. cerevisiae) EMBV3_41356 AGTTTTTATAGCTATCAACATTAGGAGTAACTTTCAACTTTGCCAGCATCACTGGTATGT Gene GeneID:282318|PPP1CC:NM_174581:18_cdna Constitutive 2 NULL GeneID:282318 17 GENE PPP1CC NULL protein phosphatase 1, catalytic subunit, gamma isoform EMBV3_42148 TTCCTATGGATAGTTCTTGTTCTCTCGCTCTCTTGCTCTGTCACTGACCTCAGCAGCAAA Gene GeneID:515181|RAP2C:NM_001075700:80_cdna UTR3_Alt 2 NULL GeneID:515181 X GENE RAP2C MGC143331 RAP2C, member of RAS oncogene family EMBV3_43047 ACATGTCTTTGTCCCCTTATCTGGGCTTGTTCTGGAGGCTGTCCGTCCATCCTTCTGGGA Gene BVV0102_255474 + 0 NULL GK000003.2:117678030-117707633 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10688 GTTCATCAGGGGTGAATGGATCAACCATCTGTGTCTTATAACCGGAGGATGCTTCTGGTC Gene GeneID:530547|UFM1:NM_001046314:133_cdna Constitutive 2 NULL GeneID:530547 12 GENE UFM1 MGC127692 ubiquitin-fold modifier 1 EMBV3_09361 CCCCACTTGGAGATGTGACCTTGGAAAGCTGGGATCCTCTTCCCTATTCTGGGCAGCTCA Gene BVV0102_121412 + 0 NULL GK000022.2:11849428-11864296 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126068 TCONS_00126063 TCONS_00126064 TCONS_00126062 1 XLOC_077362 Coding TCONS_00126068 XLOC_077362 NonCoding Coding - 22:11854244-11858150 - TSS94659 3906 3 TCONS_00126068_4 82 0.411418330773169 1 0 0.000461557174799665 0.000545382346402122 6.81789800252918e-34 9.59040542398919e-13 0.000208560273033859 4.2431286568058e-06 6.12821760294651e-05 1.0599664682892e-05 0.000168960598738596 1.43919860743089e-05 1.73463675721364e-18 7.19057992297598e-05 7.34498194893645e-07 1.73211766515693e-06 4.41795409058933e-39 0.000259074127697066 0.000339444786610443 0.000303557273937838 3.66722288196246e-06 0.00115898811308714 0.000371060470036957 4.50073819349682e-59 3.63114047630515e-74 2.69348367567425e-16 4.26935812162853e-07 1.34228619055878e-136 0.000202167454340663 1.29405812627979e-43 8.30839498545809e-12 3.48681991772863e-42 XM_005222456.1 XYLB PREDICTED: Bos taurus xylulokinase homolog (H. influenzae) (XYLB), 0.0 820 100.00 0.115975422427035 NM_005108.3 XYLB Homo sapiens xylulokinase homolog (H. influenzae) (XYLB), mRNA. 2e-55 223 72.02 0.118023553507424 0 noncoding 0 0 0 0 -0.135311215435259 0.324124688201423 -0.014598754224513 0.774078493211674 GTAAATAAAGTTGAGGTGATTTCCAAAAGTGTTGCACCGCCAACTTCTACCAACTGTGCAAAGAGACAGTCATTTCCAGGCACTTTCATCAGAATTTTTTAATGTTTTGTAGATTTAAGAACAAAAATTGGTTTCTTGTCTCAAGTTCCCATTTTTTAAAGATCTTAAACTACAGGTTGGGGAACTACTACCGTTTCATCTTTCGCGAATTGACACTTCTCTTTTGTCTGCCCAGCAAAAATGTTAAATTGCCAGTGAGCGGGATGGAAAAGTTTTTAAACTGTAATTTGCAAAGAGATGTAAGTGGCACCTTCCCTTCCCCATCCTAAACTGCTCTTTCCACCTCTCCAGGTCTATGAGGCCCTCCTCCAGCGGTATGCCATGCTTGAGCAGAGAGTCCTGAGCCAGACCCGGGGGCCTCCGGAGTGAATTCTGCAGGCCCAGGCCCCCCGCCCCACTTGGAGATGTGACCTTGGAAAGCTGGGATCCTCTTCCCTATTCTGGGCAGCTCTGCCCTTCCCACTTCCCCACCTGATTCCTTGCGGTGCTCCAGCCCTGCCCAGGACCACCTTAAAGCCCATCTTAGCACATCCTCCTGAACCCAGATGGGCTGCTTGTGTCCCCATGCGGTTGTGCCCAGGGCAGGAAAGCATCTCTCTTTTCCTGTCTTTATCCCAGGAGGCAAGATAACACTGAGCTTGGGATAGATCCAAGAAAAATTGTGACTTTTCCCCTTTCAGGACCTAAATCAGCAGATTGGGAAAGACAAAGCAAAATAAATAGATTCTTTCCTCTTTATTCACCAGTTTTCAGGATGATAAGTTGATCCCCAAGCATCCTCTGAAAGCAATTGGGTTTTTAGTATGATACATTTAACATACTTTGTATGTCTTAGTCCATTGCAGTGATTCTTCTTTTTGTCTTCTTTCTGATAGCCATTGCCTCCAGCTTTTCTCCTGCTTTCCTTGTGTGCATGTGTGCTCAGTCATGTTCAACTCTGGATGCCATGGATGTAGCCACCTGGCTCCTCTGTCCGTGGGATTTCCCAGGCAAGAATGCTGGAGTGGGTTACTTTTTCTTCTCCACCCACTTTCCTTATTTATCATTCATTCTTCCTTCTTTACTGAGCCTTCTGCCCTGTCTACCCTTTAATTATTGCTGGGCCCCAAATCTCTGTTCTCATTCCTCCTTCCCTCCGATTCTGTCCCCTCTTGTTGGATGACTTCATCTAGCCTTGGACTTCAACTGCTCCTTAAATACTAGTTATACCCAGCTCTGTGTTTCCAGCCAGAACTCTCTTTGGAGTTGGTCAGCATTCTCACAGGGGTACTTCAGAAGCAACTTATCTTCACATGCCCTTCCCCAAACCTCCTCGTCCAGAGTTCGTGTTTCAGTGAATTGGTCCACCATCTATCCATTCATTCATTCAGGAACCCAAACTTAGAACTCAGATATCTGCTTTCCCACCTCAGATCAGTTACCAAGTAACTTTGGTTATTCCTTCAGTAATCCCTTAAAAGTAGTTCCTTTCTCTCCATCCCTCCCTGTTTTACTTCAGAACCTTTTATTCCTTGCTGAAATTGCCTACGTAGAAAGTCCTCTGTGACCTGCCTCCTGAAAAATCCTCCAGATTTTTCTGTTGCTACAGGCCTGCACCTAAGTTGGACTTGGGTTAAACCAAATTACTCATGGTCTCATCCAGAGGACACAAATGCTGCAACAGGTTTGAGACCTTAGAGGATCAGAGCAGAGACTAGTGGGAAGTCAAGGGAAGGAGTTTAGAGGTTTAAGTAGGATAAGAGATATCACATCTGAAAAAGATGAAGTCATCTGGAAAGGGAGTGATACCCTTCTAAGCTCCATGGATGAAGGCAAAAAAAGGAAGCAAGAAGCTGAAGATCACAGCCCATCAACAGCAGGTCAAAGATTCAGAAGAACTCTCCCCCCACCTCACCACCACTTGGACATTACTTATTAAAGAAATTCCATTACCAACCAACAAACAAGAGGCTCCTACCAAAAAACAGAGAAAGTCGCTCAATCCACTCATTTTACCCCTGCCCCCATAGAGTTGCCCATTATTACAGGGATATCAACATAAACAGAAAAAGGAGCTGATTATACAAATATGAGAAGAAAAGTGAGAACCATAACTTTTAAAGTTAATGAAATACTTCACATAAAAAGCAACAGAAGGTAAATTATACCAACCCTCTAACATGAACTTCAAAAAATAAGAAACAATTGTGGCTATGAAAGAATACCACAGATCAGAAATCTAGAAACTCAGAATAAAAATGTGAACAACAGATAAGGTGAAAAGAGAATGGCCCAAGCTTGGGAAAGAATTTGAACAGAAAGATAAAATCACCCTAGATGATGAAGACTAAATTACAACATATCCAAATGAAAATAGGAATGACTGCAAGTACTATACATCATATAGAAGATAAGAATGAAGAAAGCTAAGACAGCAAAAACAACGTGAAGAGCTGGAAAGGCCCAGAAGGAAAATGACAGAGAAGATAGGCAAGGAAAAATTAACACGGGCAAAATTGGAGTCTTGAAGCCAAAAGATAAAACAATGAAACAGAGTTAATATTTAACACTATCCAAAGAGGAAGTCCTGGAAACAAGATCTGAATTCGTGTCTTGAATAGGCCTGTCTAGTTACTTGGAAAATTGACTCAGAATGATCAGCTGAGATTCTTCCTAGCAAACTATTATCCTTTGAAGGTGAGGGGGATTTTCTATAGGCCAAAAGGCCAGAAAAGTCTCCAGAAAGATCAGGTTGGCATCAAAAAGCGAGGTAGCAGTGGAGCAACATGTTCAAGAAACTCAGGGAAAAAATATGAACCGAGTGTTTTGTGTCTAGCTAAACTGCCCTGTAAGTATCAAGGATGTTTTTTAAAAAGTTTTAATCATGCAAGAGCTCAGGAAATATTGTACACATAACTCCTCAGTATTCTACTAAATCAAGCCTCATCCAATTAGGAGATCATTGGGGAAATGTCAGCAAAAGGATTGCTAGTGAGCACTGATTTAGATCTAAGACCAAAGTGAAAGTGGGGATTGGGGTGGGAGAAGAGTATCAAATGGTACATGTTTTGACAAGGTAGAAGTAACAACTAAATTAAAAAAAAAAGAGGACAGTATAAAGAGCTGTCATGGGAATTCCCTGGTGGTCCAGTGGCTAAGACTCTGTTCTCCCAATGCAGAAGGCCTGGGTTTGATCCTTTGTCAGGGAACTAAATCCCACTAAGACCTGGTGTAGCCAAATAAGTAAATAAATAGATAAATTAAAAAAAATTATACATGTATATATTTATAACCTCAAAGAGCTCTGTTGCAAAGGCAAAATGTGCAAGTCAGAGTACCCGGGGCAAAGGGAAAACATAAAGTAGAATTTCAGAGTGTCCAGAAAAGTGATTGAGGGAATTTCCTGATGGTCCAGTGGTTAGGACTCGGCACTTTTCACTGTCTCTGTTCGATCCCTGGTAGGGGAAATGAGATCTTGCAAGTTGCACAGTGGGGCAAAAATAAAAACTAAAAATGTTCAAGACCTGGGTATAAAATACTTATAGAAATGTGTTAAAAAGAAAAATTAATGGAGAGAAAAAAGATTGATAATGAAATCTATAGGATATAATTAAAACAGTGATAGGTGACGTATAGCTTTATAATACTGTAACACTGATAAAACAGTTAAATGAATTAAAAATACAGGGAAAAAATGTCAATTCTACCCAATAAAAAAAGACAATGTTTCTTTTTTGTTTGTTTTTTAATTGAAGGATAAATGCTTTACAGAATTGTGTTGGTTTCTGCCAAACATCAACATGAATCAGCCATAGGCATACATATGTCCCCTGACACTGTATTTCTTTTATCTCCCGAAAGTCCATT TCONS_00126062 s 5' 0 TCONS_00126062 s 5' 0 EMBV3_05075 GGGAGGATTCAGCCATCAGTGGGGTATTTTAGGATCCCAAGGACATCAGAATGGATTATC Gene BVT0102_007689 + 0 NULL GK000005.2:120912214-120924121 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193762 1 XLOC_117582 Coding TCONS_00193762 XLOC_117582 Coding Coding ZBED4 5:120908147-120913569 = TSS144750 3693 1 TCONS_00193762_1 778 2 0.319129311935067 0.0032089217899403 0.00197268186993145 0.0020322097980069 0.00246898360829871 0.00162380379818608 0.00116232247724994 0.00126566556927381 0.00267467268785963 0.00282659697160936 0.00020722866099317 1.1532830011998e-05 5.80941186722974e-05 0.000168598591906452 0.000555359509197875 0.000398789567948096 0.00107277145554562 0.000251754098653659 0.00138601247170046 0.00153205027803311 0.00198431399885024 0.00102665606241633 0.00051440309998397 0.000181344046067147 0.000667317530055974 0.0018761113032116 0.00152050766569593 0.00135015964074532 0.000213275331305996 5.89234245576413e-05 0.000271878457301067 XM_005207558.1 ZBED4 PREDICTED: Bos taurus zinc finger, BED-type containing 4 (ZBED4), 0.0 6448 100.00 0.967776875169239 XM_005261875.1 ZBED4 PREDICTED: Homo sapiens zinc finger, BED-type containing 4 (ZBED4), 0.0 2342 78.71 0.764148388843758 TCONS_00193762_1 sp|O75132|ZBED4_HUMAN ZBED4_HUMAN Zinc finger BED domain-containing protein 4; 0.0 1290 81.35 0.970437017994859 2 coding 0 0 0 0 1.81285322761394 0.020312202875803 0.00460869291165078 0.920342882093656 ATGACTGGATTTGAAACAGGAGCTGCCCGTGCTCTGGGGCCACGGGGCCGCGGCGTCCCCCTCTCCGACGCCGGCGAGGCCTCGTGGGGGTCGTCTCCCGAGACGCAGCCGGGTGGCGCGCCGAGCCCTCGGCCGCGGGAGCCGGGCGCCGTGTTCCAGCAGAACAAGAAGGTGATGAAGCGGCTGAAGTCGGAGGTGTGGCACCACTTCTCGCTGGCGCCCACGGACAGCCTTAAGGCCCTGTGCAGGCACTGCGGCTGCGCCATCAGCCGGGGCAAGCGGGGCGACGTGGGCACCAGTTGCCTCATGCGGCACCTCTACAGGCGCCACCCCGAGGTGGCCGGGGGCCAGAAGGGCTTCCTGGGGGCCGGCCTGGCCAGCTCGCCCTATGCCACCCTGGCTTCCGCCGAAACGTCCTCCTCCCGGTTGACAAACCTGCCGACCGTGGTCACCAAAAACCATCAAGCTGTGTTTCCCGTCAACAGCAAGAAGACCTCCAAGCTCTGGAACCATTTTTCTATCTGCTCCGCAGACCCCACGAAGGTCGCGTGCCTGCACTGTGGCCGGACCATCAGCCGGGGCAAGAAGCCCACAAACCTGGGCACCAGCTGCCTGCTGCGGCACCTGCAGCGCTTCCACAGCGGCGTGCTGAAGCCCGAGGGCGCCCGGGCTGCCCCACCCTCCCCTCCTGACACCCAGGCACCCCTGGGCGGGCCGTTGGCAGGTGCCGCCGCCTCTGACGACGGCAGCGAGAAGTTTTACGATTCTCACCCCGTTGCTAAGAAAATCACAAGTCTCATTGCTGAGATGATCGCCCTTGACCTCCAGCCGTACTCGCTGGTGGACAACGTTGGCTTCAATAGGCTGCTGGCATACTTGAAACCTCAGTACTCCCTGCCCCCGCCGGCCTACTTCTCCCGGACGGCCATCCCGGGCATGTACGAGGACGTGAAGCACGTCATCATGGCACACCTGCAGGAAGCCGAGAGCGGCGTGGTCCACTTCACGTCGGGCATCTGGATGAGCAGCCAGACGCGGGAGTACCTGACCCTCACGGCGCACTGGGTCACCTTCGAGCCCGCGGCCCGGCCGCGCTGCGAGGATCACCACTGCTCAGCGCTGCTGGACGTGTCGCAGGTGGACTGTGACTACAGCGGCAGCAGCATCCGGAAGCAGCTGGAGTGCTGGTGGGAGGCCTGGGTGACGTCCACTGGCCTGCAGGTGGGCATCACCGTCACCGACAACCCCAGCATCGGGAAGACGCTGAACGAGGGGGCGCGCTCCAGCGTGCCCTGCTTCAGCCACACGGTCAACCTCATCGTCAGCGAGGCCATCAAGAGCCAGAGGATGGTCCAGAGCCTGCTGAGCACCGCCCGGAAGATCTGCGAGCGGGTGCAGCGCTCGCCCCGCGCCAAGGCCAAGCTGGCGGAGCTGCAGCGGGAGTACGGGCTGCCGCCCCACCACCTGCTGCAGGACGTGCCGTCCAGGTGGAGCACGTCCTTCCACATGCTGGAGCGGCTGCTCGAGCAGAAGCGGGCGGTGAACGCACTGTCCGCCGAGTGCGACTTCCGGGAGCTGCTGAGCTGCGACCAGTGGGAGGTGATGCAGTCCGTGTGCCACGCCCTGAAGCCCTTTGCCGCCGCCAGCCGGGAGATGAGCGCGCACGTGTCCACGCTGAGCCAGGTCATCCCCATGATCCACATCCTCACCCGCAGGGTGGAGATGCTGTTCCAGGAGACCATGGGCATCGACACCATGCTCCGCGCCCTCAGGGAGGCCATGGTGAGCCGCCTGTCCGCCACGCTCCACGACCCCAGGTACGTGCTGGCCACCCTGCTGGACCCGCGCTACAAGGCCTCCCTGTTCTCCGAGGAGGAGGCGGAGCAGTGCAAGCAGGACTTGATCAGGGAGCTGGAGACGCTGGATCCTACCTCAGAGCCCACGCCCGTCCCCAGTGGCTGCGAGCCGGGCTCCCCGCCCCGGGACTGCACCGGCGAGGAGAGCCTTTGGGCACTCATGGCCAAGCTGAAGAAGAGCGAGCGCGGAGGGCGGCCCAAGGTCCCCGAGGACATGGTGCTCGCCTACCTGGAGGAGGAGGTGCTGGAGCACAGCTGCGACCCGCTCGCCTACTGGAGCCTCAAGAGGGCCGCCTGGCCCAGCCTCTCCGCCTTGGCTGTGCGCTTCCTGGGCTGCCCCCCGAGCATCGTCCCCTCCGAGCGGCTGTTCAGCACGCCCCCCGAGAACGGCAGCTTCGGCCAATCCAGGCTCCTAATGGAGCATTTTGAGAAACTCATCTTTCTGAAAGTGAATCTTCCCTTAATATGCTTCCAGTACTGAAGAGCCCGCTGGAGCCACCCGGCGAGCACCGGCGTCTGCCCAGGCTGGCGCTCGCCACAGCCGGCCCTGCAGGACGGCAGGCCGGGCGCTCAGGTCCACGGCCGCGGGAGGGGCCGCCCGGCCCTCGCTGTTGCGGCCACACGTGCCTTAACCAGTCCTTCAGGCCAGGTACCACGGTGTGTGTTTTCAGAAGTCCACTAGAAGCAGCTTGTCTCGTCAATGATGAAATACGATGATTGGGTTTTCATTCGTAACTGTAAGGTTTTTTACAAGTTGGGGATCAGTAGTTTGTCTCAGTAGAATGGCAGAGGAGAGGTGAGCAGTTTTATTCCGTAGGCTTTTTATTCGATTATGTAAAAATCAGATCAGGTACTGTATTTTAGTTAAAAATTGCTTTAATTGCAACAGAACAGCCTTTGTGGCTGTCAAATAAAACCTGTAAATAGGAGGTGGAGTTGAAGCCATCTTGGCCGAGCAGTTCCTGACTGCGGCTCTGCAGGGCGTTGAGGGGGACGGAGCGTTCTGGGGGGCAGCTGTCGACCACGACAGAGGCGTGGCGTGGGCACCAAGCCCGAGCTGACATGTGACGAAGGGTCGGTCGCGCAGGGTTTCCGCAGAGAGCACGCGCCCGTTTCAGGGCCTGCCTGTGCCGCGTGGGCGGCTGGTGTGGACACCCCCACGTGTGGTGTACACCGTGTGGCCAGCGCGCGGCGCGACACGCTTACAGCCTCCTGTTGGTGAATCTCTGAGCCTCTGACTCAGTGGCTCTACATCATGAAGCTGTCTTGAAATTTGTGCACTGACCCCCAAATTGATCCAATTATGTACACAGTTCTTTTTAGAAGAGGTGGCTTATTAACAGGGAAGAAGATTGCTATGTTATGGTTGTAAGAATAGCCTTAGGCGTTTAGATTTTCTTTTATAAAATAGGGAGGATTCAGCCATCAGTGGGGTATTTTAGGATCCCAAGGACATCAGAATGGATTATCAGTCATCAGGTGTTTTTTTTAACAATAATATGTCTTCAAAGTTTTTGTCTCAGCGTCTAGAAAAGAATTCATTTTCTTACTTCAAACCAGTTAAATATTCTGGGTGAAACGAGTCACTGATTTGCCTATGACCTTTTAGAAAAGTTATTGTTTTGTTAAAATACTGTATCTGTTATTAATCTGAATTTGCATTGACTATGTTTTTAGTGTATTTATAAATGGTGAACTCAGTTTCTGAAATTAAACTTTTTATTTGCAATTTTCTACTGCTGGAGGATACTGGCTTTTTATTCTCAGGATAATAAAACAATCCTACTCTTAGGGGCCAGCATGTACAGAAACTACCCTCAACACAGCCTTTAAATCT EMBV3_25749 CTCATAAATTCTTTTAGGCCAGTAACACATTATGACTTTGTTTACCTGGTCCTCACAGCC Gene BVV0102_336413 - 1 EMBV3_14995 GK000011.2:38150592-38161133 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027590 TCONS_00027585 TCONS_00027594 TCONS_00027589 TCONS_00027588 TCONS_00027592 TCONS_00027587 TCONS_00027593 TCONS_00027586 1 XLOC_015283 Coding TCONS_00027588 XLOC_015283 Coding Coding SMEK2 11:38096094-38155507 j TSS19516 10927 1 TCONS_00027588_18 813 0.189439004301272 16 0.816350232276308 0.000638507225530219 0.00064003024591274 0.000607053414771896 0.000528114684824927 0.000542462195646467 0.000312330874774769 0.000503948374686185 0.000558762472103535 0.00115835399196177 0.000403165986332261 0.000341757039609446 0.000219459754055581 0.000174926719957832 0.000395597111413829 5.18774075564858e-05 0.00119070296923114 0.000295119333141288 0.000928621581644897 0.000431669617471777 0.000197385797244421 0.00011951453608393 0.000478438297067899 0.000539592788378567 0.000577240578090034 0.000347055227642661 0.000217882618201376 0.000277728725393505 0.000205578841494714 9.74208462569686e-05 0.00018495319935395 XM_005212614.1 SMEK2 PREDICTED: Bos taurus SMEK homolog 2, suppressor of mek1 (Dictyostelium) (SMEK2), transcript variant X2, mRNA. 0.0 9187 100.00 0.466093163722888 NM_001282850.1 SMEK2 Homo sapiens SMEK homolog 2, suppressor of mek1 (Dictyostelium) (SMEK2), transcript variant 3, mRNA. 0.0 6017 87.15 0.447606845428754 TCONS_00027588_18 sp|Q922R5|P4R3B_MOUSE P4R3B_MOUSE Serine/threonine-protein phosphatase 4 regulatory subunit 3B; 0.0 1550 95.49 0.998769987699877 0 coding 0 0 1 1 -0.0687310835999451 0.56983403829218 -0.00478575362087624 0.92503825154796 CCTTATCTTCAGACTTTGTGTTCACATGAGCCAATGAGTTCTCTTATCATTTAAACTAAAGTGAATTAGGTTTTTTGGTACATTCCAAGGGGATATGGAAGGAAGTCAAGGAAGGCTCCTCTACATAAATGATAATTGTAGTGACATCTGAAGGATAAAGCAGGAATCATCATGAGATGATTGGAAAGAAGGAAGTTCAGACAAAAATGTCAATTTTAACTTAGATCAAGTAAAACAGGTTGGAAGATGTGGGCATTATCAGGTCTTTAGTGAGTTTAACAAGAGCTTTTTGGTGAGGGCTGAGTGATGGAAACCAGAATGTGTGTGTGTATGCGCATGCACGCGTGCTCAGTCTTTTCAGTTGTGTCCGACTTTTTGTCACCCTATGAACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTTTCCAGGTAAAAATATTGGAGTGGGTTACTCTGCCCTCCTCCAGGGAATCTTCCCAACCCAGGGATCAAATCTGAGTCTCCTGCATTGCAGGCAGATTCTCTACTGCTGAGCCACTGGTGAAGCCCAGAAATCAGAATAGATAGGTTCAATTAAGGAGTGAATGGTGAGGTGAGGAAATGAGTTTGGCTGAAAAGAGGCAAAGAAATAGGAATATCAGTGAAGAAGATACAGGTTATCAGTTTTGATGACTTTTTAAATGGGGATGGCCTTAAAGATTAGTCACCTCAAGGAAAAGCTAATTATACAGCAAAAAACCTCTCATAAAAGTTTTTTCATAAAAATATCCGGGGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCTGGAAATCCCATGTAGGCTGCAGTCCATGGGGTCGCAAAGAGTCAAACACAACTGAAGCAACTTTTACTCTGTAGAGAGAACTATTTCTAATCCTTAAGAATTAAAAAGTGTAATGTACTCTCAAGAGACATTTGGCAAGGATGAGAGATAATTCTGATGATTACAACAGGAGGATGAGGTGCAATACTACTAGCATCTGGTGGGTAGAAGCAAAGAAATGCTGCTAAACATCCTGTGATGCACAGGACAGCCTCTCACAACATAGAATCATCCAGCCCAAAATTTCAGTGATGCCAAAGTTAAGCCCTGCTCTGGGAATTTAACCCACACATGTGTTGACACACATAAAACTACTTTTGTACAATCATTTATTGTTTGAAATTACAAAGTACTGGAAATGACATATGTATATATAGAAGGTTTAAACAAACTAAAGTACACTAGAACACCAGTACGTATGATATTCCATTATTTGTGTTTAAAAAAGAGTGGTAGAAGTAAATGTTACATATATAAAGATACCTATCTATCTTAGCCTTTGGGGTTGAACCGTCCTGAAAAAAATTTTTGCTGGGAAAAACACAGTGTTGCAGTGCATTACTGCCCTCAGTATATTTTAGAGACTCTTGCTCTGGCCTTCTGTCTGTGCTTCTCTCCATGGGATGAGAAATCAGTGAAACCAATGGATGTGTCCAGCTGGAATCCAGATCATGCTCTGGCCACCCTGGAATTCCTTGTCCCAAAGGCCAACCCTGCTCCCAGGGTCTGCACAGTCCTCTTCCCAAATTCTGTCCTCTTGAGGACAGCCAAGGGTGACTACATTCAGGGAGTGCAAACATAGAAATTTGGACAAAAGGTTAGGGTATCCTATTTGTGTACATGAGAGCTGTCAAAGTGCAAGACAGAGCTGAAGTGTTTCAAGGGCCAAAGGGAGAAGGTGGAATTCTGAAGAGTTCAAGAATTCTGGATTTGAATCGAGCTTCCAGACCATATCAATATACATTTCTCAAGGTATGCCAAAGGTAGGAAAAGAAAATACATTTTTATTTAATAGATTGATTTAAAAAATTAAATCTTTAGACATATAGTATACGTTCCTCCATTTGTATGCTTGTCCTGGATCTTACCAATCTTAGAGGTCGGCCTGTTGCAAAAGAGAGAGAGAACCCCTGTGACCTAGAACAAGAAAGAAACAGAACCTGGGCCAGAGGATCCAGCAAGGGTCAGAGATGAGTCCCGAGGGTTTAACTCTGTTCCCTATTTCTCTGTTCCCTTATTTCAGATCTTGGGGAGTATAGCAGAAAAGGGATACTATAGGAAAGATGGAAGCGATGCTTTGAAACACTGCTGAGATCATTTCATTCCTTAGTTCAAAACTCCCCAGTGAATTTGCAACTCATTCAAAGTAAAATCCGAGGCCCCCAAAACGGCCTCTCTCCCACTCCCAACTTTACTTCCCACCACTTCCTCCCTTTCTCACTCCACTCCAGTCACACTGGTTTCCTTGCTATCCCTCTCACTCAGCATGCTACAGCCTCAAGGCTTTGTACTTGGAGTTGCTGTTTTCTGGCTCTCTCTGCCCCCAGGGATTTATGCATAGCAGACTGCCTCCCCTCAGAAGCCTCCCTCAACGAACATTATTACCCTTCCCAAACTCACTCTCTGTCTGCTAATCAATTTTTTTTTTCCTTTGGTCATAACATTTACCAGTATCTAGCATAGATTTGTTTATTGTCTTCCTACACTAGAATGTGGGCTTCCCTTGTAGCTCAGTGGTGAAGAATCCACCTGTAATGCAGAGGACACGGGTTTGATCCCTGGTTCGGTAAGATCTCCTGGTGAAGGAAATGGCATCCTACTCCAGCATTCTTGCCTGGGAAATCCCATGGTCAGAGGAACCTGGCGGGCTACAGTTGATGGAGTTGCAAACAGTTGGACACAACTGAGGGACTAAACAACACTAGAATGGAAGCGCCATGAAAAGAGGAATTTTTTTCTATGTATTCACTGAATGGAACAGTGTCTAGCACATAGTATACACTCAATGAGTGTTTGCTGAATACTGACTAAATACAGGAAATGACTCCTGTGATTTTAATTTTTTCCAATTAGATCTTCTTTATAGGATATTAAGCTCTTAACATATGGTGTCAAAGTGACTTCTATATAGTTCTCATTCTCAGTACATAATCTGCTCATAAATTCTTTTAGGCCAGTAACACATTATGACTTTGTTTACCTGGTCCTCACAGCCTTAAACACCTTTCAAGCCAAACTTCCACTCAGGGATCCTCTAACATCAGGTCCAAAAGTTACCGGTGTGAAGCCTTCTCTGACCTGAGATAGAGATATTATTTTCTCCGGGCTCAAAATGCATTTTGTATTTTGTGCACATTAGTCACGGCAATTAATGTGCTCTTTTGCTACATATATTGCACGCATCTGTGCTCAGTCACTGTCATTTCAGACTCTTCTGTGACCCCATGGACTGTAGCCAACCAGGCTTCTCTGTTCCCGGAGTTTTCCCGGGCAAGAATACTAGAGTGGGTTGCCATTTCCTTCTCCACAGGATCTTCCCCACCCAGGAATCGAACCTGCATCTCGTCTCCTGCAATTCTTTACCCCAGCGCCACCTAGGAAATCCCCAACATATACAACTACTTAAATTCAAGTGTATTTTGGTAGGTTCTCTTTAGAGTAAAAGAAATCCCTATGTAACCAGATTTTGAAATGAGAATTTTTCATCAGGAGCTTACTCTGTGTATGCATGTCACGTGTCAGTTCGTATGCTGGGTTTACGCACAAGATTTGGTAAAAAGAGAAGCACGTTTTGACAACATCATTGGTAAGGAATAACTACAACTCCCAAGATGCGCCGCAGGGTAAAACCTGTCCATCTCGCTCGATTTTCACCCTTCAGACTAAAGGGTTGTTAAGAGCTGGCGGCAGAACAAGCTGGAACTCTCTTTAAAAACAAACAAAAAGAATCTACCAAGAACGAACAGCGACTGACAAACAATACAGCGCACGGCTCGTATCTACCGCGCAGTGTCTGACAATGTGATGTGTGACAACCGACGCGAACGCCCAGAGAATTGCTCCCTCGCTTATTCAGCTCGGAAGACCTCCCGAGAGAGAACGCTAGAAATGCCAGCAAGAGACACTCAAAGATATGGAAACAGTGCTCTTAGATGTGTTAGGAAGGTAGTTCCCCGCCACTTGCCTAAACTTATCTGAAGACTTATGTTCCGAGGTTACCGACGCAGGAAGGACACTGTTTTCAAGAAGCGGAAAGTATGCCAGCCACCAAAAGCTTGACGGTAAAACGCCTGAACGAGAAATAAATTGTCAATGCACTTTTGTACGATGTTATAATCTCCTGGAGATCCACAGAACACTTCCTGAGGAGATGCTTAACTGTAGCAGACTCCTTAGCGAGTTTTAGTGGGTTTCGAGTCCCATTAAAGGGCTAACGTCTTCACAGAAAGAGGTTTAAACTATTTTTCTCTCACAGGCTGAAAGGGCGAGCTTCCATTATGGAGTGTGAGCACATTTCCTTCCCTTCTGCTCACGGTGAGTCCCGTCCAAGGATGCGTACCTCCCAGACTTGCTTCGTTTTTTCCACAGAGCTGGATCCCACGGCTCCTTACACGCCGGGCGCAGCCCCAACAAACCGCCAGAAGCCGAAACCACAACTCCGCTCTCGCCGCCAGTCCGGAGAAGAGTCTCGCGGCACCAGCGGAAACCCGAAGCTCGCGAGAACCGCCCACCTGGCGAGAGCCCACGCCTGCAGGCGGAGCCGAGAGAGGAGGAAGTCGCACTTAGACCCACCCATCTTACTCCACTACCCCTCCTCGCGAGAATACTGAGCACGGCCAACGCGGGTAGCGCGTGCAGAAACGGAGGCGTCACACGTTGGACTCGTCGGCCGCCGTAGCCCCTGCTAGGACAGCCCGTGCGAACCTGCTGGAGGAGGAAGAGAAAGGCAGAGAGAATCGGGTTACAAGATGGCGGGTCTTTAGTAGTTACCGCGACGGCGGTGGCGGCGGCGGCGGGAGAGCGAGCGAGCTCTGGGGGGTAAAGGGTGGGGAGGGTGGGTGCGTTCGGGGGTGAAGTGAGAGGTAACTGGGAATCTGGGCGGCAAGGTCTCAGTGGCTCCTGTTGCCCTTTCCCGCGGCTGAACCTGGGAGCCATGGTGAACTCGGGCCTCTCCGGAGCCGCCGCCGCCGCTGCCGCCACCGCCGCTACCGTCTCTCAAGAGTGAGGGGCGTAAAGGAGGTGAGCAAGGAGGCGGCGGCTGGAACAGTGGGGACCGCAGTCACCATGTCGGATACGCGGCGGCGAGTGAAGGTCTATACCCTGAACGAAGTTCGGCAATGGGACGACCGAGGCACCGGGCACGTCTCCTCTATCTATGTGGAGGAGCTCAAGGGAATGTCGCTGCTGGTTCGGGCAGAGTCCGACGGATCACTACTCTTGGAATCAAAGATAAATCCAAACACTGCATATCAAAAACAGCAGGATACATTAATTGTTTGGTCAGAAGCTGAAAACTATGATCTGGCACTAAGTTTCCAGGAAAAAGCTGGCTGTGATGAGATCTGGGAAAAAATTTGTCAGGTTCAAGGTAAGGATCCATCAGTGGAAGTCACACAGGACCTTATTGATGAATCAGAAGAAGAACGATTTGAGGAAATGCCTGAAACCAGTCATCTGATTGACCTACCCACATGTGAACTCAATAAACTTGAAGAGATTGCTGACTTAGTTACCTCAGTTCTCTCCTCACCTATCCGTAGGGAAAAGCTGGCTCTGGCCTTGGAAAATGAAGGCTATATTAAAAAACTACTGCAGCTATTCCAAGCTTGTGAGAACCTGGAAAACACTGAAGGCTTACACCATTTGTATGAAATTATTAGAGGAATCTTATTCCTAAATAAGGCAACTCTGTTTGAGGTTATGTTTTCTGATGAGTGTATCATGGATGTCGTGGGATGTCTTGAATATGACCCTGCTTTGGCTCAGCCAAAAAGGCACCGAGAATTCTTGACCAAAACTGCAAAGTTTAAGGAAGTTATACCAATAACAGACTCTGAACTAAGGCAAAAAATACATCAGACTTACAGGGTACAATACATTCAGGACATCATTTTGCCTACACCATCAGTTTTTGAAGAGAATTTTCTTTCTACTCTTACATCTTTTATTTTCTTCAACAAAGTTGAAATAGTCAGCATGTTGCAGGAAGATGAGAAATTTTTGTCTGAAGTTTTTGCACAATTAACAGATGAGGCCACGGATGATGATAAACGACGTGAATTGGTTAATTTTTTCAAGGAATTTTGTGCGTTTTCTCAGACATTACAACCTCAAAACAGAGACGCATTTTTCAAAACTCTGGCAAAGTTGGGGATTCTTCCTGCTCTTGAAATCGTAATGGGCATGGACGATTTGCAAGTCAGGTCAGCTGCAACAGATATATTTTCTTATCTAGTAGAGTTTAGTCCATCCATGGTCCGAGAATTTGTAATGCAAGAAGCCCAACAGAGTGATGACGATATCCTTCTTATTAATGTAGTAATTGAACAAATGATCTGTGACACTGATCCTGAGCTAGGAGGTGCTGTTCAGTTAATGGGACTTCTTCGTACTCTAATTGATCCAGAGAACATGCTGGCTACAACTAATAAAACTGAAAAAAGTGAATTTCTAAATTTCTTCTACAACCATTGTATGCATGTCCTCACAGCACCACTTTTGACCAATACTTCAGAAGACAGACGTGAAAAGGATAATGTAGTTGGATCTAACAAAAGCAGCACGATTTGCCCTGATAATTATCAAACAGCACAGCTGCTTGCCTTAATTTTAGAACTACTCACATTTTGTGTGGAACATCACACGTATCACATAAAAAACTATATTATGAACAAGGACTTGCTAAGAAGAGTCTTGGTCTTGATGAATTCAAAGCACACTTTTCTGGCCTTGTGTGCTCTCCGTTTTATGAGGCGAATAATTGGCCTTAAAGATGAATTTTACAATCGTTACATCACGAAGGGAAATCTTTTTGAGCCAGTTGTAAATGCTCTTCTGGATAATGGAACTCGGTACAATCTATTGAATTCAGCTGTTATTGAGTTATTTGAATTTATAAGAGTGGAAGATATCAAGTCTCTTACTGCACATATAGTTGAAAACTTTTACAAAGCACTTGAATCGATTGAATATGTTCAGACATTCAAAGGATTGAAGACTAAATATGAGCAAGAAAAAGACAGACAAAATCAGAAACTGAACAGTAACAGATTTCGCAGAGATGCAAAGGCGTTGGAAGAGGATGAAGAAATGTGGTTTAATGAAGATGATGAGGAGGAAGGAAAAACAGTTGTTGCACCAGTGGAAAAATCTAAGGCAGAAGATGATTTTCCAGATAGTTATGAAAAATTCATGGAGACTAAAAAAGCAAAGGAAAGTGAAGATAAGGAAAACCTTCCAAAAAGGACATCTTCTGGTGGCTTCAAATTTACTTTCTCCCACTCCACCAGTGCTGCTAATGGAGCAAACAGTACAAACAGCAAATCTGTAGTGGCTCAGACACCACCAGCAAGTTCTAATGGATCCTCTTCCAAAACTACAAACTTGGCCACATCCGTAACAGCCACCAAGGGAAGTTTGGTTGGTTTAGTGGATTATCCAGATGATGAAGAGGAAGAGGAAGAGGAAGAAACATCTCCCAGGAAAAGACCTCGTCTTGGCTCATAAAATATTTACTGGGGCCCCTCAACATGTGGTTGAACAAAAATGCTGCAACTGTTCAATGAGCTGAAAATCTGAATCAGAAAGCTTTCTCACTTGAACTTATAAGTATACAAGGAATAGAAAAAGACACTCAGTATATCAGCTAGGAGAGTTTAGTTCTGTAAAAAAACAAAAACAGGCTTCCCAGGAACTTGATCGCTTGCTAGTAATTAAGAGACTTGCCCTTCAGGATGTCAAAAAAAAAAAAAAGTTAGTAACCTGGGAGGTAGCTTCTCAGCAAGGAAACTCTCAGGTTTGGGGATGGTTTAGGGAAGGGATAAAGCTGGTAAGGTATCATTAATGTGGGGTTGCTCCATGGGGGTTTCTGATCTAGAAACAATTACAAAACTTCAGTTGCAAACCCAATAACATTACTTGTATAATGGTGCTGGCCATGTTGTTCTTTAATCAGTTGCCTCTGACTTTTATGGAAAACATTCAACTATCATTAAAAAATGAAGTTAAGCTGTTGGGACCATTTCTTTGAAGATCTAACAAATTCAGCCTTATTGGTAGTTGGAGGGAAATACACCCTGTGTTACAGCACATGTTGAGTTTTCTCCATCAGGAAATTTCAGTTGTGTATTTTGATGAAAACAAGCTGGATTAAAATGGACAGTTTTGTTACTGTAACTTTAAAATCAGCACTTTTAGAGAGAACAGATGCCAAGAATCAGTACAGTAGTATTCCAAAGTGATTTTCTCTAGAAACGGGAGTATATTGAACAGAACGTTTTCAACTGCCTACCAGTACAATCTTGTGGAAGATGCTTTAAAGTCACTTTCTACTTCGTTAGTAAAGGTTTCTCTGAAGAGCTGCAGGCACGTTTTAAGGTGTAATTTATAAAGACTAACATACAAAGAACAGTGCTGAATTAAGTGGCATTTAATATCTATAGGCCATTTTGGTCCAAGAAGTTACTTCAGTGTCAGTCAGTATGCAGCACCTGAAGCTTTTCCATAAACAAGGGTGTAATATGAAAGCTGCTTTTTTTTTTTTTTTTTTTTTTTTTAAGAATAAAAGCACATTCCATGTACGAAAATGAGTTTAAAATAATAAACTGAGGCAAACAGTTAAGAGGTTTTATTTTTAGAACAGCAAGTTAACTAAATATTTTAATGTTAGTTTGCTCATCTGTGATCTGAGATCATGCTGAAGTGAGAAAAACATCCCCCAAACTATAATACATTGGGGGGGGGAAAAAAGACTAAAATTAGTAATTCCAGCTACAGTCTTCAGATCACCTTTGTAATGTGTTATGGGTCCATTTTTCCTGGAATAGCTTAAACTGAAGCAGTTTCCCCTGTTTTGGAGATTTTGTAGTTAATTTTAATTTTGGCTATTGTTTGGAGGATGGGCTGTTGTGTAGATATGAAGTATAGTTTTTCCATAAAACAGATGTTTATTTTGTATTAAAAATACCACTGTACTTGTTTTACACCATTTGTATACATGTGGTGATATTAATGCTGACCTGTAAAATTCAGGAATTAAAATGTGACCCTGTAATTCTATGGTTGCTGCTTTTGTTTGGTTTGTTGTAAGTATAAGTAAACTTCATTTTGAGTTATGTTCATTTTACAGTATTTTTTAAAAGCCAGTATGTTTTCCATAGATACTTATTATAGACCACTGTGTCATAACACCAATCTGAATGAAAGAATTCTAAACAAAGGCCAACCTCACAGTAAATATCGCTGATACTAAGAGAAAGTATGCCTTGGGTCCTAAAGTCCTAGCACCGAAGGATCACAGCATGGGGGCAGTAGCTCCTCTTTCATTAAAGGTGCATATAACGGAAACTCCACCTCGTAACAGTCAAGTGACTCAGGAGAACTTAAACAAATATCAGTAAAGTTACTACAGGAAAACATTTTCTTTCAAGCAAGTTTTATCAAGCTCCTTCCCTCTTCTTAGTTCTTGTTAAATTTCCTCTTAGAATCTAAGAAGCCCAGCCTTAAAACATTTCCCTTTCTACTCTTGATTCTTCCTGGTAAAGTAACTTTGAGTTCCAGTAGGAAGTTTTATCTTTATCTTAGGAAGTTTTTCTTTCTGAAGAACTGCCACAGGTGAAACATGTGATGCATTATTATCATAGGAACCTTTTCTTATAGCATATTGTGAATATTTTCTTGAATTACAGGAAAACACTTTCCATGGTACAGATGCTCAGCCACAGTGAAATGAGAGCAAGACTTAAAAATATCGCTTGAAAGGATAACTTAAGATGGCATGTTAGCTGCTGTCCTAAATGACTACCCTCAGGCAGATCAAGATTTTTTATCTTCACTCAGTGAAGCAAGCCAGAGCCCACATTTGTATGCCTGAGGTTCTCTTAAAATAGTTATCTGTAAACATGTATGCAATATAAAACCTATTTTTAATAAAAAGCTTCATGAAATAAATTTCTGTGTTTCAATCACTAGTTTTCCACTTGTCCATGTAAGCGATGAAAATGTGACATATAAAGTAAGGCTGGGTTTTCTCTGCATGTTGACGGTTGGAACTAAGGTAATTTTGGTATCTCGTTTTGGGTGTTTTTTTGGAGGGGGCCATGCCTTTGGGCGTGTGGGATCTTAGTTCCCTGACTGGGGATGGGACCCACACCCCCTGCATTGGAAGCGTGGAGTCTTTCTAGTGGACCGTCAGGGAAGTGTTATAATCCCTTTTTAAAAGCTTATAACTATAGATATAAGGAAAAATGGAATTATAAATTAAACCTTGGGAGTGGCCTGTAACCAGAAAAGAAGGTGCTTACAGATGACACAAAACAGTTTCTGAAAGGAAGGTTTCTCCTACTATTTTGTGTTAGCTTTTAGCAAATGGACTACATACCACCCCAGGATCACTTCAAACACACAAGACTACACCCATGGCAGAATTCCCCCTCAAAGAGGCTCAAGCAATTGTTTCTTTATCTGTTTTAATGTTGCTTTTCTAGAAAGAGTAACTGAATATTTTGAACATCCCCCACATCTATTTTTGAAGTCCTATTTGCTGCTGCCTCAATGTAGGGTGCTAAATTCTGCCACAGAGAACCACTATTGCATTACATTGATTACCCTATACCTGTTCACCCACACCTACTCTTAACTCACCCAATCACCACACTGCAACTACACATCTTTTTAAAATGGACATTTTGATCATGAAACTTACCTGCTTTAAAATTTCTGTGACTTCCCACTACCATTATAAAATCTTTAAAACTCTCACATTCCCTATAGGCCTTGCAAGTGAGTACCCCACCTATCTCCAATTCCATATGCTAACCTCTTCTCATTGACTGCAGGATCCTGTTTATAACACTGCACTC EMBV3_01284 CAAGGAAAGCCACCTGCCCGAGGGGTCCCTGAACAGCCTTGTGGATTACAACTCGGAGAT Gene GeneID:100337468|LOC100337468:XM_002688110:202_cdna Constitutive 0 NULL GeneID:100337468 6 GENE LOC100337468 NULL CXXC finger 4-like EMBV3_00905 TACCACTCTCCAATAAATGGAACCAAAGCCCCTTGGAGAAATGGCAGGATCCCAGACTGG Gene BVV0102_125964 + 1 EMBV3_01082 GK000010.2:44114906-44342322 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34616 CGGTGTCAACGCCATCCTCCTCATGTGCGTCAACATCTTCTTTTACACCTACTTCGCCTG Gene GeneID:407227|SLC5A10:NM_001001442:460_cdna Constitutive 0 NULL GeneID:407227 19 GENE SLC5A10 SGLT5 solute carrier family 5 (sodium/glucose cotransporter), member 10 EMBV3_07856 AGCCTCCATATGACCAAACCATCCTGTACAGCCCAAATGTGTGTGTGTGTGTGTGTGTGT Gene GeneID:519280|GPX6:NM_001163142:22_cdna Constitutive 1 NULL GeneID:519280 1 GENE GPX6 NULL glutathione peroxidase 6 EMBV3_01198 TCAGATGAGCACGTCTTGATATTTCGGTCCCAGAGCCCTTGCTCACTCTAATGCTTCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22223 TAGGGACAAGGAATGGACGAGAGCTGTTTGGAAAACCGGATAGCAGCCCTGTCTTTAGTC Gene GeneID:505949|RDH14:NM_001075233:63_cdna Constitutive 0 NULL GeneID:505949 11 GENE RDH14 MGC139076 retinol dehydrogenase 14 (all-trans/9-cis/11-cis) EMBV3_42217 TCCTGTTGGGGCACCTGGAATCTGAGAAAGAATAAGAGACAGAGGGAGAGACCAGCTGTG Gene GeneID:538100|SCN4B:NM_001076912:107_cdna UTR3_Alt 2 NULL GeneID:538100 15 GENE SCN4B NULL sodium channel, voltage-gated, type IV, beta EMBV3_01266 TACATCTGTATGAATAAGAGGGGCAAGCTCATCGGAAAGCCCAGCGGGAAGAGCAAAGAC Gene GeneID:100300257|LOC100300257:XM_002689770:40_cdna Constitutive 0 NULL GeneID:100300257 8 GENE LOC100300257 NULL similar to fibroblast growth factor 17 EMBV3_36972 CAGTAGACACGACAGTGACGTGTCCATGTCTCTGCATGTAACTCTATTAGATCAGTAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42086 CACTGAGCTCTTTGTTTCCAAAGGAACTAAAAGAACAATTCCCCTCCCTACCCAGAATAA Gene GeneID:100336946|LOC100336946:XM_002685419:2_cdna Constitutive 1 NULL GeneID:100336946 2 GENE LOC100336946 NULL G-protein coupled receptor 39-like EMBV3_40104 GCACAGGTCCTAGGGCTGAGGGTAAAAAGCACATCAAACTCTGCCTCTGATCTCGTCATC Gene BVT0102_132919 + 0 NULL GK000017.2:5332303-5916804 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22923 AATGCTGCCTGCTACAGACACAAAGCCCAGACCAGTATCCCAACAAAAACTTGCTGCCAG Gene GeneID:515080|FBXO5:NM_001082435:9_cdna Constitutive 0 NULL GeneID:515080 9 GENE FBXO5 MGC148774 F-box protein 5 EMBV3_38933 GAGCTCTACGCCCGAGAACCAGATACAAGTCCAGAACTCAAGAGCGAGTTTGTGGAAATT Gene GeneID:513329|LOC513329:XM_002689931:76_cdna Constitutive 0 NULL GeneID:513329 8 GENE LOC513329 NULL similar to Equ c1 EMBV3_38946 GCTGCTGAGGTCTTCGTCTCCGGGCCAGCGTGGAAACTCCATGAGGCTCTGGAACATCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30939 CAAAGCACAGAGCTTAAGTGATTTACACCAGAAACACCAAGGGTGGAGATGCCCCAGCTG Gene GeneID:785705|LOC785705:XM_002707744:95_cdna Constitutive 0 NULL GeneID:785705 17 GENE LOC785705 NULL similar to mCG10725 EMBV3_22662 AGCCCACACTTATCTGTCGTACCATCTTGTTGGTTTTCGGGAGGGCAGGAAACGGAAAAG Gene GeneID:617045|TMEM169:NM_001038690:25_cdna Constitutive 0 NULL GeneID:617045 2 GENE TMEM169 MGC134344 transmembrane protein 169 EMBV3_42236 GCAGGGCATTTGACTACCTTATCTGAGGCCAAAAACACACAGAGCTAACAAGTACTACGC Gene BVT0102_139621 + 0 NULL GK000009.2:70270276-70499607 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21853 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42302 TTGTAGTCCTATGAACAGTCTCCTAGTGTGCCCAGAGACTGCATGTGCCAAGTAAACCCG Gene GeneID:504255|RGS17:NM_001101836:6_cdna Constitutive 0 NULL GeneID:504255 9 GENE RGS17 MGC179306 regulator of G-protein signaling 17 EMBV3_05330 GGATGAAAAACAAGATGGACATCCAGGGTGATCCCAAATACCGAGCTCTCTCTGAGCAGG Gene GeneID:510169|MYBPH:NM_001075435:43_cdna Constitutive 0 NULL GeneID:510169 16 GENE MYBPH MGC143401 myosin binding protein H EMBV3_25780 AACCAAGGATGTGCTCGGGATGCCTTCCGGGTTTTCTGCAACTTTACGGCTGGAGGGGAA Gene GeneID:515435|COL11A2:NM_001046199:125_cdna Constitutive 0 NULL GeneID:515435 23 GENE COL11A2 NULL collagen, type XI, alpha 2 EMBV3_10193 AAAGCCCCCCGCATCGTCTGCCTGTGGTGCCCCACCCAAATCAGAGTTCGTGGATGTAAA Gene GeneID:538948|USP11:NM_001080308:14_cdna Constitutive 0 NULL GeneID:538948 X GENE USP11 NULL ubiquitin specific peptidase 11 EMBV3_32402 AATCCAGAAGAACCCCAGGGCATGAACGTTGCCATTGGACTTGGGCAGGTGTAACTGTGA Gene BVV0102_316380 + 0 NULL GK000017.2:72208759-72229522 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35309 CACTTGGAGCCCCCACTGGGTCAACAGCGCTTCTTCTCAACCCTAAACAAGGATGAATTT Gene GeneID:617058|LOC617058:XM_002688852:192_cdna Constitutive 0 NULL GeneID:617058 7 GENE LOC617058 NULL similar to Uncharacterized protein C19orf45 EMBV3_31416 CCCAGATATCAATCACTGCCACTCTGTTCTTAAAATCTAAGCCAAATTAGACTCTGTTTA Gene BVV0102_352413 - 1 EMBV3_18885 GK000010.2:95431195-95708523 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00220 TCCTCCGCTGGTTTCTGCTTCTCATTCCTGTGACTTCAAGAGCACAGTCCCTGGAGGGCC Variant GeneID:100139115|SURF1:XM_002691662:409_cdna 256^787 4 EMBV3_17788 GeneID:100139115 11 GENE SURF1 NULL surfeit 1 EMBV3_05489 AAGGACTGTTTGAAGTAAATCCCTGGAAACTAACTCGGGACGGGAGGAAGATTTACTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36155 CCTGCTCCTGATGCTATGAAAGAAATGCAAACTAATTTATTGCCCAAAACGGTCCTCTCC Gene GeneID:281112|CYBB:NM_174035:7_cdna Constitutive 0 NULL GeneID:281112 X GENE CYBB NOX2 cytochrome b-245, beta polypeptide EMBV3_35189 CATCATGTTACTGAAGTTGAAGGAGAAAGCCAACCTGACCCTGGCCGTGGGGACAATCCC Gene GeneID:100139881|CMA1:XM_002696640:196_cdna Constitutive 0 NULL GeneID:100139881 21 GENE CMA1 NULL chymase 1, mast cell EMBV3_20990 GGGCTTCCCACTGGTCCCAGCCTTCCATATGTTGGGAAGTTGCAGAGTGTTTTAATGCAA Gene GeneID:540025|RERG:NM_001076198:53_cdna Constitutive 2 NULL GeneID:540025 5 GENE RERG MGC142471 RAS-like, estrogen-regulated, growth inhibitor EMBV3_04154 CTGATCCAGTGTCCAAGAGTTCAGTTTCAGGATAGAGGTCCGGTCAAGGCCAACCCTTCA Variant GeneID:535449|MTFR1:NM_001035412:31_cdna 279^394 2 EMBV3_34134 GeneID:535449 14 GENE MTFR1 MGC127123 mitochondrial fission regulator 1 EMBV3_23992 GTACGTGTACAAGGTGCTGAAGCAAGTCCATCCAGACACCAGCATCTCTTCCAAGGCCGT Gene GeneID:100294980|LOC100294980:XM_002690298:40_cdna Constitutive 0 NULL GeneID:100294980 9 GENE LOC100294980 NULL similar to histone cluster 1, H2bd EMBV3_39438 GGTTGTTTCCGTGTCCTGGCCATTATAAACGGCGCTAAAATGAACACTGATGTGCGTGTG Gene BVV0102_196254 + 1 EMBV3_29028 GK000029.2:17802379-17828867 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35153 GAAAGCATTTCCACTTGGGAGCAAGAACTAGAGACTTATTAGGACCCTGGAGCGCTGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32904 ACAGAGTCCAATGAGTCCCCTCTCGCAGAAATGGAGCCAGGAGAAGTTGTATATGGTCTG Gene GeneID:524601|LOC524601:NM_001101120:115_cdna Constitutive 0 NULL GeneID:524601 X GENE LOC524601 NULL similar to Spindlin family, member 2 EMBV3_34317 GTGCGATCCATGACATCAGATTTAGTCCAGATTCCCGGTTTCTAGCAGTGGGTTCCAGTG Gene GeneID:537305|EML5:XM_002691108:23_cdna UTR3_Alt 2 NULL GeneID:537305 10 GENE EML5 NULL echinoderm microtubule associated protein like 5 EMBV3_34166 CAAGGTCACTTCTCAAATTAATGGTGGGAAGATGTTATCATCTGTACTGTGCCACCTGAC Gene GeneID:537451|GYS2:XM_002687740:77_cdna Constitutive 0 NULL GeneID:537451 5 GENE GYS2 NULL glycogen synthase 2 (liver) EMBV3_09891 AAAAAGGTAGGGCATTTTACACAGCAGCAATACAGCGGAGTCAGGGCGGAGACATGGGGG Gene BVV0102_301916 + 0 NULL GK000028.2:39448965-39458541 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159689 TCONS_00159688 TCONS_00159686 TCONS_00159690 TCONS_00159687 1 XLOC_097476 Coding TCONS_00159688 XLOC_097476 Coding Coding GHITM 28:39435143-39452600 j TSS119605 6004 1 TCONS_00159688_3 345 0.0739506995336442 9 0.656565077910174 0.000211071745173511 0.000550732238330639 0.000446496662947743 0.000302563255544456 0.000383687919909293 4.54009942168329e-05 0.000570971258638654 0.000261176650403721 0.000914206323038036 0.000110985085454082 9.01920723951012e-05 6.39495645047899e-05 0.000126813130721334 0.000146282930458131 5.74472531437054e-05 0.00179218757018144 0.000592253274135936 0.00207451039577908 0.000344545815038663 0.00134268667199979 0.000354623432901773 0.000371305980548199 0.000475690788680878 0.00120783035701896 0.000726908061275398 0.000283009330203348 0.000375630555177035 0.000186352866167948 0.000140134716484183 0.000123990525874137 XM_005197251.1 GHITM PREDICTED: Bos taurus growth hormone inducible transmembrane protein-like (GHITM), transcript variant X2, mRNA. 0.0 4403 100.00 0.406395736175883 NM_014394.2 GHITM Homo sapiens growth hormone inducible transmembrane protein (GHITM), mRNA. 0.0 1835 85.62 0.265323117921386 TCONS_00159688_3 sp|Q9H3K2|GHITM_HUMAN GHITM_HUMAN Growth hormone-inducible transmembrane protein; 0.0 644 93.91 0.997101449275362 2 coding 0 0 0 0 -0.489518250982957 0.130837156822491 -0.196186761392306 0.0219875310699602 GAGGTGGGCGGAGGGAGCGGGAGGTTTGGGTGCTTGAGTTTCACCGGCCCGGAAGGGGAACTGCGCGCTTGAGGTGTCCAGGGACTGAGCGTTTCAGATCTGCTTGGTAAACCTGGTGTACCACCATGCTGGCCGCAAGACTTGTGTGTCTCCGAGCACTGCCTTCTAGGGTTTTCCACCCAGCTTTCACCAAGGCCTCCCCCGTTGTGAAGAATTCCATCACAAAGAATCAATGGCTTTTAACACCCAGCAGGGAATATGCTACCAAGACAAGAATTGGGATTCGACGTGGAAAAACAACCCAAGAACTCAAGGAGGCAGCTTTGGAACCATCGGTGGAAAAAATATTTAAAATTGATCAGATGGGAAGATGGTTTATTGCTGGAGGGGCTGCAGTTGGTCTTGGAGCTTTGTGCTACTATGGATTGGGAATGTCTAATGAGATCGGAGCTATTGAAAAAGCTGTAATTTGGCCTCAGTATGTGAAGGATAGAATTCATTCCACTTACATGTACTTAGCAGGAAGTATTGGCTTAACAGCTTTGTCTGCTGTGGCAGTGAGCAGAACTCCTGCTCTCATGAACTTCATGATGAGAGGCTCTTGGATAACCATTGGTGCAACCTTTGCAGCCATGATTGGAGCTGGAATGCTGGTACAGTCAATATCATACGAGCAGAGTCCAGGCCCAAAGCACCTTGCTTGGTTACTACATTCTGGTGTAATGGGTGCTGTGGTGGCTCCTCTGACGATCCTAGGGGGGCCTCTTCTCCTCAGAGCTGCGTGGTACACGGCTGGCATCGTGGGAGGTCTCTCCACCGTGGCCATGTGTGCGCCCAGTGAGAAGTTTCTGAACATGGGGGCCCCCCTGGGTGTGGGCCTCGGTGTCGTCTTTGTGTCCTCACTAGGATCGATGTTTCTTCCACCTACCACTGTGGCTGGTGCCACTCTGTACTCAGTGGCGGTTTATGGTGGATTAGTTCTTTTCAGCATGTTTCTTCTATATGATACACAGAAAGTAATCAAGCGTGCAGAAGTAGTACCAATGTATGGAGTTCAGAAATACGATCCCATCAATTCGATGCTGGGAATCTACATGGATACATTAAACATATTTATGCGTGTTGCCACTATTCTAGCAACTGGAGGCAACAGGAAGAAGTGAAGTGACTCAGCTTCTGATATCCTCAATACATCAGATATCTGGCTTGTTTAATAGGGGCAGATATTCATTAAATAGTTTGTACAAGCAGCTTTCGTTGAAGTTTAGAAGATAAGAACTTGTCATCGTGTTTCAAACGTTCCAGTAATGTGATGCTTCAGGTCTGTTTTTCTCCTGGAGAATAAATTCAGTAGTTCTCTTCCAGATAGCACATGCATTTTCAATTCTTATGTCTCAGTAATTCTACAATGTTCAAATTATTGTGAAAACCAAGGTTTGTTTTTCAGGAATTTGAGTGTTTTATCTGTTTTAAAATTTATTTGGTTTAGTGAAAGTTCACAAACTTGTGTACCTGCAGTTTCCTTTTTGGAATGTGGAATATTAACAAGTAATGTCATAAGTGATGAAAGGATTTGGTGAAGGGACCAGAGAGAAGCAAAAGGGCACCTGCAGTGTTTCTTTGAATGCTCAGCACTGAGGCGATGGCGGCAGCAAGCCAGGGAGTCTGCACATGAGCAGACGAGGCATGGCTGCATCTCCGCAGAGCCGCCAGACACACTGAGCAGGTGACAAAGACATCGAGGGTTCTCCAGGCGCTCCTTACAGTACAGATGGGGTCATGCTTGACTGCCTGCTGTCTCACGCTGTTCGCAGAGTTCAAAATGCTAACCACATGGCGAATTCCTGTTATATAACGTGTATGTTGTAAGTCTTACTTTTGAATCACCTGAAACAAAGTATCCTTAAAACACTCAGGAAAAAAGACTCAAAGCATGAATGTTATTGCATTTTTAAGTATAGAAACAATATGTGCATAATTGCTGAAAAATTTTGCAAATTTATTGAGATGCTTAAAGAAATGCATGCTTGTCTTTCTCATTTCTTCAAGCTTTAAAGCTTTTATCAGAAAAACCTGTTCATGATTTATACTTGAGATTATGAAAGTTTTTCCCTTTAATCTGATTTCTTGCATTCAAAAAGGAAGGCAAAGTGAGGCTTTTTTCCTGAACTGTATTGATCAAAAATGTATTGGAGAAAACACTTCATTAGAGTTTCCCCCACCAGGATTTTCCTTCCGCATAGACTGTTATCTTGTGCCCTTTGTAAGTTTTTTGATACAGAAGAGTTATTTCTGGAAGCTCTTAAGAATGAAAAAAGTGTATGATTATTGAGATGGTGTATCGACAAATATTTATTACAGTAATCCAGAAAAAAACTATTCTAACCACCTCACTTCAGGATGTTCATTTCTGAATAATAAAGGGTCTAGTCAGATGGTGATTGGTCTGTAATTTTTCCAGCTGAACCATATACGTACCATCGAATAGGGGTTTGAGAAAGCACACGACTCTCTTACTGACATAGCACGTAGAGTAGTAGTTGTTGTTTAGTCGCTAAATCATGTCCAGCTCTTTGTGACCCCATGGACTGTAGGTCACCAGGCTCAGCTGTCTGTGGGATTTTCCAGCAGCAATACTGGAGTGGATTGCCATTTCCTTTTCCAGGGGATCTTCCTGACCCAGGGATCAAACCTGCGTCTTCCTACATGGGCAGCCGGATTCTTAACCACTGAGCTACAGTATGTCATGATAACCATGGTACTTCCAGCTAGAACTGCATTTATTTGAACTCTGGCTCTTCTGTTTATTCTTTTTGTGACTGCAGGCAAATTATTTCACCTCTCCCCCCATTGCCTCGTCTGTAAAACGAAGATGACAACAGAACTACCTCATAGGGTTAAGGTGAAATGTACGGGCACTTAGTAAATACTGCCTGAGATTTACCTGCTGTTGCTGGCTGGTTTTGAAGGGTTTTTTTTTTTTCTTAAGAAAGATCTGTATTTGTTTTCCCTTGTCTACGTCTTAAAATGTAATCTTACAGGTCCTGTTGTCAGTCATGTTTTAGAATTCAGTTTATATCCTTATGTTTGCATGGTATACACAATGCAAAATGCTGTATCTCAACACTGGGTGTCAGGCAAAGGCTTAGCTAGAAAATCGGGGTGGGGATCATTTTATTGTAGATAAGACAATGAAGACTTCAATATAAAGTGAGATATAAAATATGAATACTTATAAATTAAAATAGTAGGTCTAAAATGATAATAGAAGATCTCTAGTTCTCTGGCTCCTGTTAACAATACCACTGGGTTTTTTTTTCTCTTCACATGACTCACGGGGAAGAGTGGAGACCTACTGATTGACAAGCTTTAGGGGGAAAAAAATGTTTCTCATTTTCTAAAACATCCAGTGTTAATGGATAACTGAGATACATGATTTTAAAAAGTCACACAAAGTAATAAAGATCTATTTGTTTGCTTAGAATGGTATCTAATGAACATTCAGAGGGCGTGAATATAGCAGACACCGTGCTAACTGGACCCAGGAGAGGCAATAATAAGTAGAAATTGCTTTCTAAAGTACAGCAACCTCATGTAAAAACAACCATAATCTATTGTGATGAATGTTACAAGAGAAGTGAACAAAGTGTGTTTCTAAGATGTCCAAGGAGGAAGTCTTCAAGAGTAAACATAGTTACAGCACATAAAAAAGGTAGGGCATTTTACACAGCAGCAATACAGTGGAGTCAGGGCGGAGACATGGGGGCAGATGGCAAGGTGTGAAGCCCGACGTCCTGCTCACAGCTGGTGGTGTGTGCTGGGCCTAGGGCCCCGGACTTCTGAGTATTTTATGTGCATTTTGAGTGTTAGGATCTGGGAAGAAAGATCCTTATGCTTTCCTTAAAATTGTTCATCTGTGTAGGATGTGTCCCAGTTAAAGTCCCTGGAGTTGATACCCAAGATCTGTATCATTGGAATAGGGTAGGAGGATCCAGGCATGTTAAAGCTAATGATTGAATTGAAATTTTTCCGTGTTGTATGCTGTCCTTTGTGTGATCATAACATTCCTTTGAGCCAAGCACTGCTTCCCCCATTTTGCAGAGGAGTAAACCAAAGCCCACAGGTTGTCTTTGCACAAGGTCATAGCAGGGAAAAATAAAGTGGCAGAGTTAACCAGTTATACTGTTTGTGATGAATGCCGTAGAGCTGAAGTCCTATTTGAGAATCAGAAACTCTGTACTAGTTAAATAGGTTGAGGTTTAGCAGAACGTTAGAATTTTAGTGTTTATCAAAAGGCATTGATATTGAAGGGTAAATGGATGGTAATCGATGTTTTACTTCCTAGATCCTATTATATAGAGGACCAGAAACTCTTGTATTGCCCAGTCCACTTGAAGCTACAAAGCAGGCCATTTATTTAAGGTTGATGTAATAATCAGTAAGATGAAATCCTCCTTATTAAATAGTACTCAGTTTCACTGGCACTCAGAATGGAAGCTGTTTTCAGGAAAAGATGAAAGTTATGATCTTGACCACTTTGTATTTTTTGAAACAGCTCAGGAAGATGGAGAAAGTCCTCTCAATATTATTAATACTTGAAAATAGCAAAAGGAGCATTTTGTGTCTCCTTTTCATCTTCAGCAAAGATGAAGTAAGTGAAAAGTCTGGTGGGGAAGGAGGTTTATACTCTCAGCTGGTCCTAGGCAGGGCTGCTGCTAGTCAGCACGTGGCAGGAGCAGCGCGGTGTGTTCCCTTCAGCCTCAGCATGCCGCTCTGCTCTGCTCGTTGCTTGTGTTGCTTCCTCACCTAATGGAATATCAGCCCTCCAAAGGGGCCTCTCAGCGCTCTGCCTTCAACTGAGAAGTTGTGTTGCAACCTTGGGGCTACAGCTGGAAGCCTTTGGGTGGGGGAGGGGAGGGTCTCTGTGACTACACCCAGAAATACAGGATTGATTTTTTTCTGGCAGGATCATCCTGACATTCATTCTCATAACTAGGCAAATTCAGACAGTTTTTAAATATTTAAATGCTTTCCACTAAGCGCTTGTTAAAATCTGATGACCAGTAAGTGTGGTGTCAAATGGCCATCCTTCTAGCCTAACCTTCCACATGCCTGGAAAGGTGGACTGCTCGCCTCTGCACCCCAGGGCAGTTTACATAGCATCACAGGGCTTGGTAACCTGAGGTTCTAATGATGATCTCCCAGGAGGTGTCATGTCTTGATGTATTAGCGTGTTAGTCATGCTACCTGTTCTCAGATGCAATATTTTTCACACTTCATTTCTGAAACGTGTATTTGATTTTGTAATTTTTTCCCCATAAAACCAAACCGCTTATCTTTAAATCAGTGGCATCTTAGAATTGAAGAAATAATGGTAGTTCTCAATGATTTGTTTTCTGTTTCTCATAGTTCATTGTCCTGTAAGAACAGGGATCTGATGATTCAGAGGGAATCTTCCACAAGAAAAGTAAGAACAACCTAGCCCCACCCAGTTATGTACTTAACACAGGCTGAATGGACTGATTTCCCAGCAATGCAGAATGACTTACGAACAGAAAGGGCAGTGGTGGCTGAGAAAGAAAGCTTTTGTGCTTGGGTATGATCTGTTCATAAGGAGAGTAGGGAATTAACAAGTTGGTTCAGTTTGGTACTCCTTGAAGGAATGACCTCCTAGCACCAACTGTGGGAACAAACCAGGATGAAGGAGACCCGTTTTTGCCCTCCTGTCAAAGCCTGGCTGCAAACTTGTCAGCTAGAAGACAGCATCAGATGGGCAGAGGCAATGGGTGGTGGCCAGAAGAGCTCCCAGAGTGAGAGACAGCCACTGGCCCTGGCCCTGGTGACCTTTGAGCAGGGAACACTGGAGACAAACCTCTACCATTGGTGGGAAATTTCGGGGCTGTACACCACAGCATTAATCTTTACACGTCACTTTTTTAAGAAGTCAGGTGAAGAGAGTCACTATTTGGTAGCAAGCTGTTAGGAGAAACGGCAACAAACAAAC EMBV3_09573 GCCCAAAGAACAAGATGCAGTAGCGGACAGATTGCTGACCAGAGGCTTGAGAGCTGAGTT Gene BVV0102_449970 + 0 NULL GK000018.2:35246119-35250880 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082926 TCONS_00082927 TCONS_00082924 TCONS_00082928 TCONS_00082925 1 XLOC_051140 Coding TCONS_00082925 XLOC_051140 Coding Coding FAM65A 18:35234780-35291850 j TSS62450 5786 1 TCONS_00082925_7 725 0.0625648116142413 23 0.899016979445934 5.31690829796054e-05 0.000447825493587988 0.000163162877073582 8.87502729477376e-07 1.02441489741961e-06 4.98373032742124e-05 6.48052899675298e-07 6.06498850165569e-06 5.00647696327915e-06 4.0411075219885e-06 2.64546286138396e-05 3.40453042786429e-05 0.000278898605987363 1.94885576130587e-05 0.000872732938279238 4.97540984509438e-06 3.6491460294288e-14 0.000212618662129232 0.000246302678430742 4.62125495695111e-06 4.87078414755697e-06 9.55903953904215e-05 0.000160188111833809 2.1683865818286e-05 0.00104830265413458 3.69495534911249e-08 8.0563317718476e-05 0.000108416593923559 2.70242348154832e-07 0.000345218123502616 XM_005218597.1 CTCF PREDICTED: Bos taurus CCCTC-binding factor (zinc finger protein) (CTCF), transcript variant X4, mRNA. 0.0 7065 100.00 0.67680608365019 XM_005255775.1 CTCF PREDICTED: Homo sapiens CCCTC-binding factor (zinc finger protein) (CTCF), transcript variant X1, mRNA. 0.0 5272 93.61 0.603525751814725 TCONS_00082925_7 sp|Q61164|CTCF_MOUSE CTCF_MOUSE Transcriptional repressor CTCF; 0.0 1272 96.33 0.998620689655172 4 coding 0 0 1 1 0.0139377864409572 0.933316963153439 -0.0174412146253814 0.756389197922812 AGCGAGGTCCGCTCAGCCAGCGCAGCCATGGAGCCCCGCGCGGACTCATTCCATGATGTCCCTGTCGGTGCGGCCGCAGCGCCGCCTGCTCAGCGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGAAGCCAGGAGCGGGGTCCCAGGAGCTTCCCGGCCTTCAGTCCTCCGGGGCCCCCTAGGAAGCCCCCGGCGCTCTCCCGAGTGTCCAAGATGTTTTCAGTGGCGCACCCGGCCCCCAAGGTCCCGCAGCCTGAGCGCCTAGACCTGGTGTACACTGCACTCAAGCGAGGCCTGACGGCTTATTTGGAAGTGCACCAGCAGGAGCAGGAGAAACTCCAAGGACAGATAAGGGAGTCCAAGAGGAATTCCCGCCTGGGCTTCCTGTATGACCTGGACAAGCAAGTCAAGTCCATTGAACGCTTCCTGCGACGGCTGGAGTTCCATGCCAGTAAGATTGATGAACTGTATGAGTCATACTGTGTGCAGCGGCGTCTCCGGGATGGCGCCTACAACATGGTCCGTGCCTACAGTACCGGCTCTCCGGGGAGCCGTGAGGCCCGGGACAGCCTGGCCGAGGCTACTCGAGGGCATCGCGAGTACACAGAGAGCATGTGTCTGCTGGAGAGCGAGCTGGAAGCACAGCTGGGCGAGTTCCACCTCCGGATGAAAGGGCTGGCCGGCTTCGCCAGGCTGTGTGTTGGTGACCAGTATGAGATCTACATGAAATATGGGCGTCAGCGCTGGAAACTACGGGGCCGCATAGAGAGTAGTGGAAAGCAGGTGTGGGACAGCGAGGAAACCGTCTTTCTGCCTCTTCTCACGGAATTCCTGTCCATCAAGGCGCACTGCACCGCGCCGCCGCCATTTTGTGTCCGAGCCTGTGGAGCGATTAAACCGTGCGCGGAGCTGCTTCTTTGGCGGCAGCGGCGGCGGCGGAAGCCGGTGCGGGTGCGCGGAGCTGGCTGGGGACGCCGGGTGGCCGGAGCGGTGGAGCGGCGGCGGAGCGAGCGCTGCGGGGGGTGTGGCGCGGAGAATGATTACAGACCTGGGTCCAAAGAACAAGATGCAGTAGCGGACAGATTGCTGACCAGAGGCTTGAGAGCTGAGTTCTGTTTTCCCTGCTCAAACTGACTTTGCAGCCACGGAGAGGGTACAAAGTGGTATGATTCCGGGGTACTTGAAGCCACAAGATAAACATGACTCATCTTCTTGGAGCTTCAGTTGTGCTCACTGAGGGGGCGGTGAGTTAAGTAATTTAACAGGAAGGGGAAATGGAAGGTGAGGCGGTTGAAGCCATTGTGGAAGAGTCTGAAACTTTCATTAAAGGAAAGGAGAGAAAGACTTACCAGAGACGCCGGGAAGGGGGCCAGGAAGAGGACGCTTGCCACCTTCCCCAGAACCAGACTGATGGTGGTGAGGTGGTCCAGGATGTCAATAGCAGTGTACAGATGGTGATGATGGAACAGCTGGATCCTACCCTTCTTCAGATGAAGACTGAAGTCATGGAGGGTGCAGTCGCTCCAGAAGCAGAGGCTGCCGTGGACGATACCCAGATTATAACCTTGCAGGTTGTAAATATGGAGGAACAGCCTATCAACATAGGAGAGCTTCAGCTTGTACAAGTACCTGTTCCTGTGACTGTACCTGTTGCTACCACTTCAGTAGAAGAACTTCAGGGGGCTTATGAGAATGAAGTGTCTAAAGAGGGCCTTGCAGAAAGTGAACCTGTGATATGTCACACCTTACCTTTGCCTGAAGGGTTTCAAGTGGTAAAAGTGGGGGCCAATGGAGAGGTGGAGACCCTAGAGCAAGGGGAACTTCCGCCTCAGGAAGATCCTAGTTGGCAAAAAGACCCAGACTATCAGCCACCAGCCAAAAAAACAAAGAAAACCAAAAAGAGCAAACTGCGTTACACAGAGGAGGGCAAAGATGTGGATGTGTCTGTGTATGATTTTGAGGAAGAGCAGCAGGAGGGTCTGCTGTCAGAGGTTAATGCAGAGAAAGTGGTTGGTAACATGAAGCCTCCAAAGCCAACAAAAATTAAAAAGAAAGGTGTAAAGAAGACATTCCAGTGTGAGCTTTGCAGTTACACATGTCCACGGCGTTCAAATTTGGATCGGCATATGAAAAGTCACACTGATGAGAGACCACATAAGTGCCATCTCTGTGGCAGGGCATTCAGAACAGTCACCCTTCTGAGGAATCATCTTAACACACACACAGGTACTCGTCCTCACAAGTGCCCAGACTGTGATATGGCCTTTGTGACTAGTGGAGAATTGGTGCGGCATCGTCGTTACAAACACACCCATGAGAAGCCATTTAAGTGTTCCATGTGCGATTACGCCAGTGTAGAAGTCAGCAAATTAAAACGTCACATTCGCTCTCACACTGGGGAGCGTCCTTTCCAGTGCAGCTTGTGCAGTTATGCCAGCAGGGACACATACAAGCTGAAAAGGCACATGCGAACCCATTCAGGGGAAAAACCTTATGAATGTTATATTTGTCATGCACGGTTTACCCAAAGTGGTACCATGAAGATGCACATTTTACAGAAGCACACAGAAAATGTGGCCAAATTTCACTGTCCCCATTGTGACACTGTCATAGCCCGAAAAAGTGATCTGGGTGTCCACTTGCGAAAGCAGCATTCCTACATTGAGCAGGGCAAGAAATGCCGGTACTGTGATGCTGTGTTTCATGAGCGCTATGCCCTCATCCAGCACCAGAAGTCACACAAGAACGAGAAGCGCTTTAAGTGTGATCAGTGTGATTACGCTTGTAGACAGGAGAGGCACATGATCATGCACAAGCGCACCCACACTGGGGAGAAGCCTTATGCCTGCAGCCACTGCGACAAGACCTTCCGTCAGAAACAGCTCCTTGACATGCACTTCAAACGCTATCATGACCCCAACTTTGTCCCTGCGGCCTTTGTCTGTTCTAAGTGTGGGAAAACATTTACACGCCGGAATACTATGGCAAGACATGCGGATAATTGTGCTGGTCCAGATGGTGTAGAAGGGGAAAATGGAGGAGAAACGAAGAAGAGTAAACGTGGAAGAAAGAGAAAGATGCGTTCTAAAAAGGAGGACTCCTCTGACAGTGAAAATGCTGAGCCAGACTTGGATGACAATGAGGATGAGGAGGAGCCTGCTGTGGAGATTGAACCCGAGCCAGAGCCCCAGCCAGTAACCCCAGCCCCACCACCTGCCAAGAAACGGAGAGGACGCCCCCCTGGCAGAACCAACCAGCCCAAACAGACCCAGCCCATCATTCAGGTCGAAGACCAGAATACAGGTGCAATTGAGAACATTATAGTTGAAGTCAAAAAAGAGCCAGACGCAGAGCCTGCGGAGGGGGAGGAAGAGGAGGCCCAGCCAGCTGCCACAGATGCCCCCAACGGAGACCTCACGCCTGAGATGATCCTCAGCATGATGGACCGGTGATGGCGGGGCCTTGCTCCTTGCCAGGACTGCTCTGGGCTGTGTTTAAACGGCCTGCATCTTAATTTTCTCCCTTCTTTCTTCTTTTGGCTTTGGGAAAAGCATCATTTTACCAAACATACTGAGAACTAAAACTTCAAGGATGATGTTAGAAAATGTGATTTAACTAGAACTTGCTGTTTGATGTTAGCAAATCATGGAATGTTCTGAGTCCCTGAGGGTTTACTGTGAAGTGCTGAGGACAGTGTTCACGCCTCCCTGGTTTTCTTAGCTGGAAACAGAGACATTGAACCCTCTCTCTTGCAATGGTAAACCACTCCAGAAACCACCACCGGGTTTCCCAGAGTTCTTATGGTCTACTTCCCAGGAGAGTTTTTAATTGTAAATGCAGACTTGGGAAGGACTTAGACTTTTAAACTGGTTTTTGCTTTTGCTTTTCCCTGACTCCCTTTGCTTGGAGTCAGCTGCACACCAGTAGTATGGCATGCTACGATTGGTTTCTGTCCTGAAGACTTTGCCTCTTTCTTGGCAAAGTTTCTGGTATGGTCAAGCTTGTAAATAACTTTTTTTACATTTTAATCTTTTCCATTAATTACGAGGTTGAAAAGAAGTGCAGTGTAAGAAAACCCAGCATTTTAATTACTTGCAAATTAAGTTACTACAGACGGTAGTTTGTAAACGTTGACAAGGAATTGGATCACAATCATGTCGCAGAACAGCACCGAGACTGCTGCCCGCTCGTGACGGACACCCACATGGAGCATCATGATTCCAACCCATGGAGCCAGCATTTGAACCTTGTACAATTAACTTTCGGTTATGATTTCCCATCTACATTTTCTTTGCTTTGTTCGTAGCTGAGTTTCGTGTTTTATAAATCCTCTCTTGAAGCAGAAGGGTGATTATGAGTGGGTCACAGCAGCTCTTAAAAGCTGGGCCAGGAAATTTCACTAGGTCAGTAATTTAAACTTCGGATCTTCAAAAAAATAATAATGTGAAGCAAAACCAACTCAAAGTGATTCTTGCACATGAACTGTCACATGTTTAAAATGTGTTTTTAGAGAGCCTCAGTCTTGCTGATTTCAAACACTTTTTTCTTCTGTGTATTGCTTTTAAGAGAGCCATCAGTTAGCTATCAGACTCTAGGTTGATGCATTTTGTACTTAGCTGTACTGTGTGATATTTTTCATTATTTTAGGACGCCAACATGAGACCTGTAATAAAATATGTAATGGGGTTGAAAGCTGGGGAGGAGGATCTACTGCTGTACAGCTAATAAATCATAACGGATTAACAAGTGCTCCGAACACCCCCACTTGTGTGATTCCTGCCTAACCAGGGGCCCAGAGAGGTCTGTGTGCATAACCTCAGACAGCGCAGACCTCTTTCAGAAGCAAGCTGTGCTTCCAGGATGACCACTTCTGTCTAGCAGATGGGCGATGATCTTGGCAAGTGATGGAATATTGAGGGCATCCTGCTACAGGTTTTAATGCCCCAAAGTGTATGAGTAGAGATGTGAGTCTATATAGCTGCCAGCCCCCATGATCCACGTAAAGAGTGGATTCCCTGTGGTAGAGCAGGTGGACCACAGAGCTTAAAGAAAAAGGGGCCAATGGGAAGCTCTGGCCTCATGATCTCAGCACAAGAATTCCCTGGTGGTAAAGTGGATAAGAATCTGCCTGCCAATTCAGGGGACATGAGTTCGAACCCTGGTCCAGGAAGATTCCACATGCCACATGGCAGCTAAGCCTGGCATGACAGCTACTAAAGGCCATGCACCTAGAGCCTGTACTCCACAAAAAAGAAGCCATTGCAATGAGAAGCGTGTGACCCTCAACGAAGAGTAGTCCCCACTCAACCACAACTAGAGAATGCATTCATGCAGCAACAAAGACCCAGCAGAACCCAAATGTAAAAAGATTAATAGTAACTTTAAAAAATTGGCTCACGGAGGACCGGGATCAATGCATCAAGCTTTGCTAAATGCAGGGGAACAGAAAGAAACTGGGCCCTAGAGAAGTTCACTTGAAAGGGGGGACCGATGTGCCACTATCAGACTGTGGGGAGAGACACCTAAAGAACATAGCTCCCTGTTAGCACCTGGGAAGCAGGATGGGAAGGAGATGCGTTAGGAAGTTTCTGTATTGGTGAATTTCCATCTTGCTGTTGTCCATTTCTGGGCAGATTGCTCTGGCAGAACCATTTTAGGTGAAAGCTTTGGCCACACATTACAGGGTTTTTTGGTTACTGAAGTATAGTTGATTTATAATGTATTACTGCTGTCCAGCAGTGTGATTCAGTTATATATACATTTTTTTTAAATACTC EMBV3_08165 AAACTGGCGAAGCCCACGAAGGCAATGTAGTGTGAAGTGGAGAGGATTTAGCCCTGAAAC Gene GeneID:100337355|LOC100337355:XM_002697696:224_cdna Constitutive 0 NULL GeneID:100337355 24 GENE LOC100337355 NULL HIG1 domain family, member 1D-like EMBV3_30671 GCTCTTCAGTTAAGATCCATTTTTATTAAGTACCCCCTTCAGGTACCTTCTTACACCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13934 CGGTCTGCCTAAAAATGGCAGCAGGGGCTTTTACAGCAGGACTGTTGAACTCTGTGGTTC Gene GeneID:788874|LOC788874:XM_002693631:178_cdna Constitutive 0 NULL GeneID:788874 15 GENE LOC788874 NULL similar to Olfactory receptor, family 5, subfamily F, member 1 EMBV3_41764 TTGACCAGAGATAAACCTCTTGGCATGAGACAGCCTGGCACACCACTGATCACTCGGTTG Gene BVT0102_324291 - 1 EMBV3_27721 GK000007.2:67745734-67795751 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221940 1 XLOC_135249 NonCoding TCONS_00221940 XLOC_135249 NonCoding NonCoding - 7:67751737-67753387 - TSS165938 1650 2 TCONS_00221940_2 53 1 0 0.000692652904050256 0.000669896441237663 0.00060010867987489 0.000261706011380089 6.58291191355229e-05 0.000223295086574451 0.000445330256901922 0.00116860449255902 0.000965942987772749 0.00063587644535558 4.16216782568686e-06 0 0.000205197069156818 0.000145395962508348 5.94691014161562e-06 0 0 0 0.000638865125314988 0.00124215759313067 4.04763725695881e-06 0 0 0 0.0010791617106105 0.00077713612320112 8.8774937091767e-05 0 8.82653299027373e-06 0.000287858952549202 XR_231766.1 LOC101903257 PREDICTED: Bos taurus uncharacterized LOC101903257 (LOC101903257), 0.0 652 100.00 0.218181818181818 0 noncoding 0 0 0 0 -0.0625240832580142 0.612381525168397 0.00984524197205571 0.886502307987515 GTCCTATCCCCCTTGTTTTACAGGTGGCAAAACAGACCTAGAGGACGGGGAGGCACAGCTAGAAATCGGAGACCTTGCTGCTAAAATAACCCCTTCTGGTTTATCTCCCCCACACTCTTTCCTAAAGAAAAACTAAGAGTGTGCGGTGTGTGTGTGCGTGGGGGGTGGGGGAATGAAACTCTGTCCATTCTTAGGTTTGTAACAGCCTCAAAATTACGGAATCTATTTAAGGTAAACCTGATGCTGCCCATTGTCCAATGCCTAACACAAATCAAGCTTATGGAAAAAGAATATTAAAATTTCCACGTTTTCCCTCGGGTCTGGAACCCCAGGATTCAAGGGAGAATTAAACATTTTCCTCTCCCATTCCCTTTCTCTTCCGAAGTCCGTAAATGACAACGTGTTTACACAAGTTTTTATGTCGTCTGAGCTTCGCCCCGGCCCCGCTTCCTCCTCTGTGTATGTTCCGCGCAGAGAGATGTCTGCTTCAGGACGCGTTCAACCTAAACAGAACCCCGTCTGATTGGAAAATGTATTTATTTGAAAAATCGTAACTCACAGCTTTGGTGAAAACGGCCCCCAAATTTATGGGATGGCTTGGGGCGCGGCGGTCGTAAATTAAAAAGCACTGGACAACCCCCTCCCCCAATCCCCGCAGCGGCACCAGTCAGGTTCTCAGGAGCACCCAGAGACTAGCCCCCTCCCGGCTCCACCCCGCCGCACTCTTCAGCCTCTGCTCCAATCTCTTGCTGTGGGTAAGTGGCTGTGTTAACAGGCAGGTGGATTTCATTCTGGTTCCTTTCACCCAGTCAAGTTAATTTCAGGGTAGCCTCACTGAGAACGGTTTCAGGTGGTCGGTTAACAGTGAACAGTGTTCTGTTGTGCACCCATCTGTTTTAGGCATCTCGGGTTTTCTCTTTAAGTACACGCTGGTAAATTTCGTGGTAGTGGGCTGCTTGTCCCTAGTCCCCAACCGAGTGATCAGTGGTGTGCCAGGCTGTCTCATGCCAAGAGGTTTATCTCTGGTCAGTGTCATGAAGGTCAGTTTCATCGGCGACTGCTGCTGCCCAGGTCTGGGAAATTTTTTCCTTTCAGTCCAATCTGAATTCCCCTGGAGGATGGAGTCAACACATTCCGCCTAGTTGCGCGATCCTTCAGCCAGCCTGCGCCAGCTGAGGACTAGGATTAGAGGTTGGAACTGCGAGCACGTCCTGGGGAACAGGAGCCGCGGCCGCCAGAGGTGGGGAGCCGCGTAGTCCAGGCGGAGCTGGACTCATGGGGCCTTCACTCGCAATCGTCTGCTTCCCCCTGCAAACGCCGGACTGAGCCATATCGCTCCGTCTTTTTTTTTTTTCACTAACGATCAAGCGCCACTTTGGCAGCGTACCCACGGGGAGCAAGGCAAGCTCTCCGCTCCCGGCTTGTCTGTCTAAGCGCTGCTGTCTCGGGCAAACGAGTTTAGCTACTCAAAATTTGTGCCTTTTGCGCTCGTTTCAAAGGAGCGCTCTGGAGCGCAGGAAGAGCCGCAAAGTAGTGCGGGAATCCCAGAATCCGAGGTGGTGCCGTAACTCATCCCAACCGGTTCTGCCGCGGCCACCTGCCTCGCAGCAAGCCAGTCCGCTGGCACTGATGTATACGCAGAAACGTTGG TCONS_00217556 TCONS_00217557 TCONS_00217558 TCONS_00217559 TCONS_00217560 TCONS_00217561 TCONS_00217562 TCONS_00217563 TCONS_00217564 . 5' 5999 TCONS_00217556 TCONS_00217557 TCONS_00217558 TCONS_00217559 TCONS_00217560 TCONS_00217561 TCONS_00217562 TCONS_00217563 TCONS_00217564 . 5' 5999 EMBV3_12730 GTGCACAGCATCATGGTTCCCCAGGAGTGGATTTACCAGTTACCGCACCAGAAGTTTCTT Gene GeneID:515032|NBR1:NM_001100367:139_cdna Constitutive 1 NULL GeneID:515032 19 GENE NBR1 NULL neighbor of BRCA1 gene 1 EMBV3_35894 TGTTTGACAACCGCTACCTGTATATCCTGGACTTGCGGACAGAGAGCCTGATTAGCCGCT Gene GeneID:767863|FBXW2:NM_001076974:2_cdna Constitutive 1 NULL GeneID:767863 8 GENE FBXW2 NULL F-box and WD repeat domain containing 2 EMBV3_38040 CTCACCCCCAGAGATAGAGGGGACGTTAGGTTTGATTGCTACAACCTTCTTATACCGTCG Gene BVV0102_412712 + 0 NULL GK000008.2:45440076-45503978 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227513 TCONS_00227515 TCONS_00227511 TCONS_00227514 TCONS_00227517 TCONS_00227519 TCONS_00227512 TCONS_00227516 1 XLOC_138261 NonCoding TCONS_00227515 XLOC_138261 NonCoding NonCoding - 8:45472564-45493128 - TSS169832 674 0.0919881305637982 4 0.967417205660653 3.19701638554277e-05 0.000166308612548593 0.000305438359145677 2.13681508782286e-11 7.43993674431947e-09 8.19666671685144e-12 9.26793418094841e-05 1.35360734904692e-08 1.14514843112666e-08 1.2973572315943e-13 0 0 4.07219745460876e-09 0 0 0 0 0 1.53490736966691e-08 8.13856470405009e-10 0.000635825641766976 0 0 0 0.000604873168923813 1.04920907728701e-13 0.000300758873610712 0 0 0 NM_174654.2 SLCO1A2 Bos taurus solute carrier organic anion transporter family, member 1A2 (SLCO1A2), mRNA. 5e-22 109 98.41 0.0919881305637982 0 noncoding 1 0 1 1 -0.0784787540726929 0.701606778831895 -0.00254136861000206 0.959040350001601 CAGTTAAGACAGAGCTACCAGGCCTGATGACCATCGGAATTTACTGAAAGGACACACAAGAGAAGACCTGATAAACCAGAACTAAGGAGAGGAGCCCAGGACACTTGTGGATTCAGAGCCTCAGATACACATGGACAGCCTTTCAAGAAGCTGCCTTTGGATGACTCATTCACAGCCACCTCCAGTACACATGTGTTTCTGCTCAGATTCAGATTCCTGAGCAAGATGAACTGATTGGTGTTTCTTTGGTCATGTGACACCCCTGACTTTAACCCCTGTGGTTGAAAACCCACCAGAATCAGACAAAACAGGCTGGGTGCTGTTACTAGAAGGGGAAGAACTTCCAAGGAGCAGAAAAAGGATTTTATAAAAATCGTCCTCATCTTATTGATTTAAACATTATGCAGGTAGCAAGTAAGCAAATGCATTTGTGAAAAACCAAATAATGAAGAGTATAGAATAATACCTTACTTCTTACCTTACTCTCACCCCCAGAGATAGAGGGGACGTTAGGTTTGATTGCTACAACCTTCTTATACCGTCGACCATTTGGAAACAGCTACATCAGCTGTAAAGAGGAGCGTCAGCTGGTGTGATGGCTGGTCACCATGAACATGTCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCAT TCONS_00225181 r 5' 31303 TCONS_00225181 r 5' 10811 EMBV3_13485 TGTGACGTGAACCCTTTGCTTGAACTTGCCTTCACTGATACCCACACTCTAGGGCTCTTC Gene GeneID:509025|LOC509025:XM_002693572:260_cdna Constitutive 0 NULL GeneID:509025 15 GENE LOC509025 NULL similar to olfactory receptor Olr659 EMBV3_37748 TTCAAATATCCTACTTTTGGTAGCCATCTGTCATGCGTTCCCCCCCCAACCCCAAAATAA Gene GeneID:616981|FERMT2:NM_001101264:137_cdna Constitutive 3 NULL GeneID:616981 10 GENE FERMT2 NULL fermitin family homolog 2 (Drosophila) EMBV3_05904 CTGGAAATTGAGTGGACTTGAGGCCTTTCTTCCAGAAAACAAGGACTTGATTGTCAGGCC Gene GeneID:507148|MGC157163:NM_001101880:95_cdna UTR3_Alt 2 NULL GeneID:507148 6 GENE MGC157163 NULL hypothetical LOC507148 EMBV3_26051 TCACTACCTTGCAGCAGTTTGGCAATGACATTTCGCCAGAGATAGGAGAGCGAGTCCGCA Gene GeneID:538628|RUNX1T1:NM_001099385:70_cdna UTR3_Alt 3 NULL GeneID:538628 14 GENE RUNX1T1 NULL runt-related transcription factor 1; translocated to, 1 (cyclin D-related) EMBV3_23110 GAGTCGAGCGGAGAAGAGCCCGCCCGAGAGGTAGGAAGGCCAAGGAGATTATCAACACGG Variant GeneID:790815|SCLY:NM_001083804:26_cdna 133^248 1 EMBV3_13079 GeneID:790815 3 GENE SCLY NULL selenocysteine lyase EMBV3_37360 ACCTGGTCCCTGGCTGCCCGCGGGAATTCAAGCTGCGCTCTAGTGGCTACGCTGAGATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00773 CAGCTACTTGTCCCTTTCTCATGCCGGAAGTCTCACCACAATTCCTGCTGGGTTAATTGA Gene GeneID:100336729|LOC100336729:XM_002698448:445_cdna UTR3_Alt 2 NULL GeneID:100336729 26 GENE LOC100336729 NULL CG8379-like EMBV3_18298 AGCCCCTGGTTGCCTTGGTGGGCAATAAAAGTCTTCCTGTGTTTTCAGAAAGTTGCTGCT Variant GeneID:536021|RAB28:NM_001034634:13_cdna 604^707 1 EMBV3_21034 GeneID:536021 6 GENE RAB28 MGC128932 RAB28, member RAS oncogene family EMBV3_03058 GTGAAGTAGGTGTATTAAGCCATACTGAACCTGAGTGTAGCAGGGCAGAGGCAACCTAGG Gene BVT0102_075687 + 0 NULL GK000018.2:7366904-7421232 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088208 1 XLOC_052995 NonCoding TCONS_00088208 XLOC_052995 NonCoding NonCoding - 18:7415468-7417471 - TSS65554 2003 1 TCONS_00088208_5 85 1 0 0.000163023747984016 0 5.08207421270949e-05 0.000165834789750345 4.43681367853724e-05 1.78584948095041e-06 3.20263620503818e-05 0.000191940275979299 7.87831793780225e-05 0 0 0 8.59496129894763e-06 4.69695147591918e-06 0 0.000593370691953805 0.0010195114834602 3.75799988390107e-05 0 0 1.06091150611492e-05 0 0.000503815996801963 8.36974784034149e-06 0.000318233019771826 3.16570581173173e-05 4.97281174106073e-05 4.79539459150235e-06 0 0 NM_029441.3 Cdyl2 Mus musculus chromodomain protein, Y chromosome-like 2 (Cdyl2), 1e-175 621 72.46 0.63654518222666 0 noncoding 0 0 0 0 -0.0454763438930816 0.700285984779894 0.039373648939885 0.489697902402966 GTTTCAACCTTTTTATTCAAAGCAGCTTCTCACGATGTATAAATACTGCATATTAGCACACATGAAAAATACAACTTCTAAGGCACCCAGAAATGTGTTCATACACGTTACAGGACCATTCACAAAGAGAGTGTACAATTTGCTCTAGACAGTCAGCGTTTGATAAATCAGAAGGTTATTATCCCTCAGTACCGCACCCAGTCTCGGGTAATATTTACAGCGTGGTGAGAAAGGGGCACTGTACCTGCTTTATAAGTCTATGAAGTACTCATACTTACAGATATTCAGAACTAGTTAAAGACTTTCCCATGATAACCTGGCGAAAGAAAACGAGTAGCCTAATTTGCAAAGGTCTCCTTGGATTTTGGTGTGTGTGCTAGATCCATGATCAAATCTGAACACTCCCGGGGTGGGCCGGATACATTTTTTGGTAGCCTGCTTCATTATCAGAGGTTTGGTAATAAGCCTTACCACTAGAATCCCACTTCTTCAGTATCAGATCATTTCTCAGCCGGCCGATGGATGAATGGTTTCATTGTGGATGAGCATGGAGCATCTACCTAGTGTGAGAAGTGAAGAGATTTCTTCCAGGACTAAACAGGAAGCGGAATGGGTTGATGGAGAACAAAAAGGAGGTGGAAATTTGGCAACTGTAGGATCTGGCTGCTCAGTGTAGACACACATCTGAAGAACGCGCGCTGGAGGTGTCTACATGGATGGACAAATCACATGCTGATCAGGGACCCTGAAGGATGCCGGACCTCCACTCTCTACGGTACCGACATGGATAAAGGCTGGACTACACAGCAGAAACACCCGCCTGGGACAGCGCGTTTCAATCTAAGAAACTCATCTTCCAGAGCCTTCGAGAGGGGACGGCAAATCCCTCTGTAGGGCCAGCCGGGGGGAGCATACGGTTGGTGGACGGGGGCAGCTTCTCTGTGCCATGAAGCATGCACACCTCTGCCTAAATGTGCCCACAATCTATGGAACTCGTGCTTTGCTGGAATAATGGAATTCTTTGGTCCTTGGTTTTATGAAAGGCAATATTTTCACAGTCCTGTCAACACGGGCATCAGCAATGACTTCAGGCTGGGACTGATGGCACAGGGACACATTAAATACTATACGGAAAATTCCACACCCTCCAAACTGCCCAGAGTCACCTTAACGAGCTCCAGAGCGAGGCCAGGTGCTGGGCCAACGAGGCAGGGTCAACCCACAGAGAGGTCAGAGCAGAGGCTAAAATCTAGATGTCAGTTTTTCTGATTGACACACACACTGCAAATATTTGAAGCCAGTCTCCATCCTAGTGGGAGACAGGTTGGCTTTATGAACACGTATTTTGAGATGAACCGAATAACTTGACTTTAGCCATTCTATGGCCCTGGTCTCAAGATCATCTTTGAAACCTTGATAAGGAGAACCAGGAGGTAACTGCAGAAGCAGGGCCAATGAGAAAGAATCATTTTTTTTAAGTTTAATTTTCAGAGTTTACTTGGTTTTATCAGACCCTGGTGGACGCCCGTCCAGTGAGCTCCACGACTTATGCGCCATTCAAACAGCCCAGAGTGGGCTGAGACCGGCTCAGCTGATGCGTGTGTTGCACACCTAGGTTGCCTCTGCCCTGCTACACTCAGGTTCAGTATGGCTTAATACACCTACTTCACTGACAAGACACTCAGCACATGTGGGAATGCGGATGACATAACTGAAATCGACTTCAGATTGTCTACACAGTAAGACTCACATGTAAACTTTGTTAACATCTCTCAAGGAGTGCTGACCGCAGCCAGGCTGGACATTCCCAGGTCACCTGCAAGGAACCTGGGGTCAACCGCCAAGGTCAGCAGCAGGAAATGCCATTGGTTCAAAACAAACAATGGACCAGCGGCCCTCCCTGTGGCCGTGTCTACACCACATGAACAGTACGCAGGGGGCTCCAGAACACCTGTCCAGGGCCCCTTCGTATGGCCAAGACAATCGCCAAGGTGTCTAACTGG TCONS_00085318 . 3' 3762 TCONS_00085318 . 3' 5764 EMBV3_41412 ATGGCTTATTTACTACCTGTTATAAGTTTGTACATTTAAACACCATCACTCTTAATCCCC Gene BVV0102_205560 + 0 NULL GK000030.2:18729253-18770189 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19809 GGAATACAAAACCCACACCGACAGCATCAAGGACAATTCAAGCTTTCGAAATACAAAAAT Variant GeneID:519920|EIF4E2:NM_001075795:112_cdna 717^795 1 EMBV3_09694 GeneID:519920 2 GENE EIF4E2 MGC152103 eukaryotic translation initiation factor 4E family member 2 EMBV3_14913 CCCGGAGCACTTGGTATAGAATTGACTTGTTCTACTTCACTGGGGTGACAAAGAGGGCCT Gene BVT0102_159254 - 1 EMBV3_26263 GK000011.2:99103592-99131532 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41675 ATCCGCTGTTGTCCACTGCTTTTCTGCCAAATTCCTAACCAGATGCGTTCAAAAAGGCCC Gene BVT0102_065565 + 0 NULL GK000028.2:44418584-44419334 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33110 TAATTATCTGTCTTTTCTCTGGCCTTTGAACCAAGATCCTCTGCTGGCTTGACAACTCTG Gene BVT0102_405349 - 1 EMBV3_20406 GK000030.2:25010008-25235057 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246603 1 XLOC_151041 NonCoding TCONS_00246603 XLOC_151041 NonCoding NonCoding LOC100848707 X:25170607-25174785 = TSS184847 530 1 TCONS_00246603_1 95 3 0.873832894421834 0 0 0 0 0 0 0 0 0 0.000558950367041794 8.63844784093505e-06 0 0 0 0 0.00249165772386778 0 0.00241440847915627 0 0 0 0.000882079416044425 0.000155785848767479 0.000885678518193449 0 0 0 0.000126861374445252 1.83192896728138e-05 0.000805413909673486 XR_240752.1 LOC100848707 PREDICTED: Bos taurus uncharacterized LOC100848707 (LOC100848707), 0.0 957 100.00 0.99811320754717 XR_244544.1 LOC101928833 PREDICTED: Homo sapiens uncharacterized LOC101928833 (LOC101928833), misc_RNA. 4e-09 66.2 70.32 0.283018867924528 0 noncoding 0 0 0 0 -0.0589235886803613 0.640039270696315 0.0336485934592902 0.491125285271114 ATACCATTATGATGATTTGAGTGACTTCATATTACTGGCTTCTCTTCAGAGTTGTCAAGCCAGCAGAGGATCTTGGTTCAAAGGCCAGAGAAAAGACAGATAATTAGACTTAACTCTCCCTTTTCTTCATATAACGAAAGAGTTAAAATATTTAGATAATGAACAAAGTTGCAATGTTCTTTCTTCTTTTCATTTTTGTATTTTTAATGGAAAGTCCACTTCATTTGAACATGATTTATTCAGCACCCATAAAATTGGATCAGTCATTGGCCAAACCAAATGAAAACAATAGCGGTCATCAACAGAGCGGATTTCCATCAAAGTACTCAGCCATGATGAGAAATGAGACTGTTGTTCTACAGAGAAAAATCTGGAAAGATTCTGATGTAGCCTATGCTATACCTAAACGATACATCAAATGGGATATAAGGAATATGGCCTTATAAAATTCACAAATAGCCCTCTAATCAAATCCCTCTGAGATGGTACCACACAAATCAAAACAATAAATGCATCATTTAATTAGCAAA EMBV3_14216 GGAATTTTTAGAGCCGGATAGCTGGGAGACATTGGACCATCAACAGTTCTTCACAGAGGA Gene GeneID:509003|NUCB2:NM_001075381:95_cdna Constitutive 0 NULL GeneID:509003 15 GENE NUCB2 MGC139712 nucleobindin 2 EMBV3_26992 TCCTCAACCCTTCGAATCTTGTGTGGTATCTCCCTTCAGCCTACGTGATTGCGCTGATCA Gene GeneID:538861|STEAP4:XM_002686859:59_cdna Constitutive 0 NULL GeneID:538861 4 GENE STEAP4 NULL STEAP family member 4 EMBV3_27202 TCAGCAGGCCGTAAGGTGCTGACCAGTTCTTCTGTTCCCAGGGCAAAGGGGCCATTCTGA Gene BVT0102_288093 + 0 NULL GK000028.2:27080094-27096453 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09398 GGTGGACTAATGAATTTCCAGAATGCCAAGAAACTGATGTCACACCAACAGTTCCAAAAT Variant GeneID:518609|CD55:NM_001030303:64_cdna 735^923 3 EMBV3_26917 GeneID:518609 16 GENE CD55 DAF CD55 molecule, decay accelerating factor for complement (Cromer blood group) EMBV3_02661 CAGCTGTGGTGTCCCATTTTAATGACTGCCCAGATTCCCACAGTCAGTTCTGCTTCCATG Gene GeneID:540388|TGFA:XM_002691233:89_cdna Constitutive 0 NULL GeneID:540388 11 GENE TGFA NULL transforming growth factor, alpha EMBV3_13708 CAGTGTAGCCAGGGCCATCAAGTTTGCCAGCTGTTTTCTAACAAACAATTATATACCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14332 GAGTCACAGGGTGCTCACTGGGTTTCTACTGCTCTCATGGGTGATTGGGCTTATCCATAC Gene GeneID:788100|LOC788100:XM_002690693:312_cdna Constitutive 0 NULL GeneID:788100 10 GENE LOC788100 NULL similar to Olfactory receptor 4K13 (Olfactory receptor OR14-27) EMBV3_11923 GCCACAAACTAAGCCTCAATTCAGAAGAACATAAATTACACAGATCACATTCTGTGAAGA Gene BVV0102_208517 - 1 EMBV3_37913 GK000025.2:40456326-40643968 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22884 GGGGTCAAGCTGGGATTTGAACCCTATAGTCTAGCTCCAGAGTCACACGTTTTAGGATGG Gene BVV0101_011760 + 0 NULL GK000018.2:40379996-40424604 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083210 TCONS_00083207 TCONS_00083209 1 XLOC_051202 Coding TCONS_00083207 XLOC_051202 Coding Coding POP4 18:40370492-40381468 j TSS62586 2841 1 TCONS_00083207_2 188 0.0242872228088701 8 0.741867881548975 0.000569992000772226 0.000272505581173375 0.000595311553753981 0.000629801149544494 0.000257376352681055 0.000282392592792453 0.000172976862307199 0.000197174725461789 0.00134604637093316 1.04684801612368e-09 4.05399016798644e-06 3.83837539020147e-05 4.8953284622351e-05 0.000217045666159094 0.000124257330103258 3.44447107076511e-09 4.50317276464772e-09 2.99256487628736e-11 0.000751131334125535 0.000558341519598289 0.000313449450784351 4.72293499369544e-09 1.91780606369389e-09 8.49567155849136e-09 0.000601563004187378 0.00122743647464951 0.000158926676782396 3.44912973487232e-09 1.17354129608568e-09 0.00011773749267219 NM_001113282.2 POP4 Bos taurus processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) (POP4), transcript variant 1, mRNA. 0.0 1370 100.00 0.266807462161211 NM_006627.2 POP4 Homo sapiens processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) (POP4), transcript variant 1, mRNA. 0.0 884 76.25 0.416050686378036 TCONS_00083207_2 sp|Q2KIB9|RPP29_BOVIN RPP29_BOVIN Ribonuclease P protein subunit p29; 3e-126 359 100.00 0.925531914893617 1 coding 0 0 0 0 -0.089402566553693 0.403182511010564 -0.0378248313756502 0.51048934362946 AGGCGTCATCCTAAATCGGCGCGAGTCGGTGACGTCACGGGCGGCGCCACCCCTGAGCTAGGAACCCGAGACTCCAGCTCCGAGTAGCAGGTCGTTCGCCTGACAACCTGCTTCCCGCGCGACTTCGGGAACAAGGAACGTCTGCGCCACAAACTTGGACGAGAGAGGCTCTAGTGGTCGAGGGCTGCTGAAGAAAGTAGAGACGGGTGAAGAGTGAGCGACGCCTGAAGGAGACGTCAGCAGAGCGCCCCGGAAGCGGTCCGAGAATGACGAGTGTGGTCTACCATGCCTTTTCTCAGAAAGAGGCAAAAGAGCTCGACGTTCAGCACTCGGGAGCCCAGCGGGCCGAGGCCTTTGTGAGGGCCTTCCTGAAGCGGAGCATGCCCCGCATGAGCCAGCAAGCCCTAGAGGACCACCTGCAACGCAAGGCCGTTGTCCTGGAGTACTTCACTCACCGGAAGCAAAAGGAGAAGAGAAAGAAATCTAAAGGCCTTTCTGCCAAGCAGAGGAGGGAGCTGCGGCTCTTTGACATTAAACCAGAGCAGCAGAGATACAGTCTTTTTCTCCCTCTACATGAACTCTGGAAACAGTACATCCGGGATCTATGCAACGGCCTCAAACCAGACACGCAGCCACAGATGATCCAGGCCAAGCTTCTAAAGGCAGACCTTCACGGCGCTATTGTTTCAGTTACAAAATCCAAGTGCCCCTCCTATGTGGGTGTTACAGGGATCCTTCTACAAGAAACAAAGCATGTTTTCAAAATCATCACTAAAGAAGACCGCCTGAAAGAAAGTGGTGTACAGGTTTCCCCAGGAAGCATAAAGCCATGAGTCTGTCTGCAGGTTATGTGTTATCCCCAAGCTAAACTGTGTGTTCACCGTGGAGATCGATGGCTTCATTTCCTACATTTACGGTAGCAAGTTCCAGCTGCGGTCAAGTGAGCGGTCTGCAAAAAAGTTCAAAGCCAAGGGAACAATTGACCTGTGAGCTGTTGCTGCCTAAGGGGATTATTTATGCCAGCCAAAGACTGGAAACATCCACCTTTCAGGAAAGAGATGGTCAGGCCAGTTCTGGTTGTAGACCACTTCCAGCCAGTTTAAATCAGCGTTAAGGACACTTGGTCGTCTGGGAAGAAGCACACTGTACTGAGCACAGAATGCAGGGACCAGAGGGATGTGTCTTTGTAGATGCTCTTGTTTTTATATTACTCCCATGGAGAGAAGAGATCGGCAGAAAGCACCAGGATTAACACAAGTTGACCTAAATAGTTTATTTGGTTTTTCTTTTTCATACTTTTCTGTGTTTTCAGAATGTTGTTTGATAAATCAGTAGTTTGTGTGATAATAAAATACGCGTGTGGGCGGGAACAGGCCACAGGAGTGATTCCTGCAGCACAGCCGGGACGGAAGGGAAGAGAGGCCTGAGGCTCTCCCTGGCTTGTGCCTTTACTTTTGCTCTGGGTGCCATGAGGCCCCGGTCTCACTAGTTCAGAGGTGCCTGCATCTTCGATGCGTCACTTTAAATCATGCCTTCTGTGAAGCTCTGTGACCTAACCAAGGTTTACTTTGCTGTTTCTAGAAAGCAGAAGAAAGTTCCAGTACAGGGAGCTTAAGCCTATGGAATGTTCTCAATTCCTGAGTCTATTAGGCTCCAGAGGAAGGTGGACTGAAGGGAAAATAAGACTACAGCCTTTCCCAAGGTCTAACCTGCTAGGAAAGCCTGAGTCCCCAACGGTGCCGCCTTAGGTGACTTGGTTCCATTTCTGCTGCCAAAAAGCATGGCTCTCCAGGCTGACCCTAGGCCTGTGGGCAGTGTGCCCGTGGGCCAGTAGGTGGGGCCCTTCTATGCAGGCCTGAGTACAAACCCACCGAATGAGAACAGGGTGGGGACCAGCCTTCCAGGTCTGCTATTAAAAAAGCCATATGGCTTAGCAGGCCCTATCACCCCTTTCCTTTGAGCAGCAGGTGTTTGCCAGTCAGCAAGGTGAAGGCAGAGCACTCCTGATGACAAACTGGTGGCAAATTCACGTGCTTTTTGCTTCCACACCAAGAGAAGCAGCAATGCCAGAGCTTTGCTTTCTCAGCATTTCCCGCTCAGACTCTACACGGGACAAGAAACACGGCAAGAGGGGTGTAAACACTGATTTCACATCAGCTGGAGAACAGCGAGAAGGCCTAGCTGTGCCTCCTGAAGGCTGAGCCCACCGAGAGTCTCCCACGGTCATACCCGCCTGGCAGCTCGACCCCGCTTCCCTCTCTGCTGTCCCTCACTTAGCAGGAGGGTCTGGGTCTCCTGGGGTGTTCTCCGCAGTCTAGCCACCGTTGCCTGTGGTTTGGAGCACAGTTCCCAGCACCACCTCAGACAGGGCATCCTGACCCAGTGACAGCCATTGGGTGTGGCCACAAGGACATCAGAGTCAGAGCACTTTCTTGCCTGGGGCCTCACCACCTGAGAGGGGTCAAGCTGGGATTTGAACCCTATAGTCTAGCTCCAGAGTCACACGTTTTAGGATGGGAAGAGACTTCGAGAATGCATCCTTCATTACCTGGGTTCCCGCTTCCTGAGGGAATCTCTTGTCTTTCCCATAATACGGCTTCTGTTCTTCCGGCTGTCTGAAAGTGCCACACTGGTGACAGCATAGGTGCTATCACTTCTAAATCCCACTGCTCTTACCCACCCCTCTGCAATGTAAAAGGCGGCCAATGTTGTATAAATATACAGTTGCTTTCCAGAAAAGTTGTTGGAACCAATTGCCATGTGAAATCTGTTTTTCATTTGGCTCAGACTCAAGTTTCCATGTGAGTGGCTGTTTAGTTTGTAGACTTCTCTCCCCCTCCC EMBV3_15212 ACAGCGACAGTTCAACACTGGCTAAAAAATCACTGTTTGTGAGGAACTCCACCGAACGGC Gene GeneID:532571|WWC2:XM_002698669:149_cdna UTR3_Alt 2 NULL GeneID:532571 27 GENE WWC2 NULL WW and C2 domain containing 2 EMBV3_14496 CATGGGCATCGACCGCGTCTCCATGTTTCTCACAGACTCGAATAACATCAAGGAGGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20015 AACGCAGTGTCCGGCACAGAAAGTCCTTGGCACCTTTCACCTGGATGGTGGCAACAGACC Gene GeneID:100294857|LOC100294857:XM_002685989:329_cdna Constitutive 0 NULL GeneID:100294857 3 GENE LOC100294857 NULL hypothetical protein LOC100294857 EMBV3_02117 TACTGTGGTGCACGTGAAATCAGAACGATACGGCCACGGGAAAAGAATCTCGGCCCAGGA Gene BVT0101_012833 - 1 EMBV3_35150 GK000006.2:118178760-118212843 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204292 TCONS_00204291 TCONS_00204288 TCONS_00204293 TCONS_00204290 TCONS_00204289 1 XLOC_124397 Coding TCONS_00204290 XLOC_124397 Coding Coding KIAA0232 6:118108401-118180637 j TSS152857 6660 1 TCONS_00204290_6 1317 9 0.907925520869385 0.00103116910875074 0.000906502068881668 0.000807870832422801 2.11052032493643e-10 0.000844513825701899 0.000379273679705597 2.80446621378071e-09 0.000341164387568639 0.000614846750520283 7.55549423787023e-05 0.000291947602856903 6.02217451801507e-30 0.000273788131882757 0.000344794446616727 1.27037194111943e-24 0.00101317199563401 2.90262677998381e-05 8.07130928125681e-05 0.000426433559742897 0.000723432199254339 0.000791015662127079 0.000603036943581583 3.35079929788663e-10 0.000158932389836133 0.00116936369967834 0.00111579857894657 0.00038952173141879 0.000102145468755222 0.000162679467188457 6.15852779866535e-05 XM_005208354.1 KIAA0232 PREDICTED: Bos taurus KIAA0232 ortholog (KIAA0232), transcript 0.0 8035 100.00 0.668768768768769 NM_001100590.1 KIAA0232 Homo sapiens KIAA0232 (KIAA0232), transcript variant 2, mRNA. 0.0 4686 84.75 0.631681681681682 TCONS_00204290_6 sp|Q92628|K0232_HUMAN K0232_HUMAN Uncharacterized protein KIAA0232; 0.0 2265 88.44 0.997722095671982 1 coding 1 1 1 1 -1.19884619552401 0.0111438454370054 0.0612469713273518 0.221835594664404 AAGTGCGTCTCATCAGAACAAGAAGGCACCTTTCCCACAAGAGCTATAACATAGCCTCTGCGGACGCAGCCCTCGGCAGCAGGGAGGAGCCCACATTCAGAGGACTGGACGCAGTTCACACAGGTTCTGCTGGAGACTTACATTTGGCCTCGATGTGAAATTAAAGTAGAACATCGTATCTAAATGTATGTTAATATCAGGATGTTGATTCATTGGTCATGCCTGCAGAGGGAAATTCAGTTGTAGATGGCTGACTGCCAGCAGAAATAAATGTTTACCCTAGATGTCCAGCATCTCTCCTTTTTACTGGAGTGAAAATCCCCTCCAGACACCAACAGAACGTCACTGCAGAAAATGCTTCGCATCTTAAGGATGTCAGCCACCTCAGTTCATGCGCCCTGTCTGTGCAGTTGCTGTGGACGATTTACCATCTGAAAGCTCCTCCAGCTCTTACCCAGGCTCCGTATCTGTCTCTGAAATGTCTCTGCTTCATGCTCTGGGTCCCGTGCAGACCTGGCTGGGACAAGAGCTAGAGAAATGTGGCATTGATGCCATGATTTATACTCGATACGTCCTCAGTCTTCTGCTGCACGACAGCTATGACTACGACCTGCAGGAACAGGAGAATGACATCTTCCTGGGCTGGGAAAAAGGAGCTTATAAGAAATGGGGAAAGAGTAAGAAGAAGTGCTCAGATCTAACTCTTGAAGAAATGAAAAAACAGGCCGCTGTCCAGTGTCTTCGATCTGCTTCTGATGAAAGCTCTGGCATTGAGACTTTAGTGGAGGAGCTCTGCTCCAGGCTGAAGGACCTGCAGAGCCAGCAAGAAGAGAAGATTCACAAGAAGTTAGAGGGGTCTCCCTCTCCAGAGGCAGAATTATCGCCCACAGCGAAGGATCAAGTGGAAATGTACTATGAAGCGTTTCCACCGCTGTCCGAGAAGCCAGTTTGCCTGCAGGAAATCATGACCGTGTGGAACAAGTCCGCCGTCGGCTCCTACTCGAGCTCGTCCTCCTCGTCCACAGCCCCTCCAGCCAGCACAGACACGCCCTCCCCCAAGGATTGCAACAGCGAAGGCGAGATCATCCGGGAAAGAAGCGGCGACGCGCCGCCCGCCAGCCTGCACGAGAGAACACAGAGCGGCCGCAGCCACAGCGAGAAGGAGAACAGGTTCAGGAACGGGCCCAGCGAGGAGCGGTCCGCGCCGCCGCCGCCGTCCAAGAAGCAGAGCCGGCACCGGCCGGACGGGAAGCCGCGCCCGCGCTCCTGGTCATCCGGCTCCAGCGAAGCCGGCTCGAGCTCCAGCGGGAACCAGGGGGAGCCCAAGGCGTCCGCGAAGTGCGTGAAGTTGAGGCACAAGGTGCGGGAGATCCGGAACAAGAAAGGAGCGCGCAGCGGGCAGAGCCGGCTCTCGCTGAAGCGCGGCGAGAAGGCGGAGAGAAGCCCACACGCCGCCGGGAGCAGCAGCAGCAGCGGCGGTGGCGGTTCCTTCCGACAGCTGTGCAAGCGGGGCAAGCGGCCGCTGAAGGAGCTGGGCAGGAAGGAGGCGGGGGGTGCCGAGGGCAGAGACCTGTTCCTGGAGAGCAGGACGGACAGGGAGTACAAGGAGGAGCCGCTGTGGTACACCGAGCCCATCGCCGAGTACTTCGTCCCTCTGAGCAGAAAAAGCAAGCTGGAGACCACGTACCGCAACAGGCAAGACGCCGGCGACGTGACCTCAGCAGCTGTGGAGGAGTTGTCCGAGTCAGTGCACGGCCTCTGCATCAGCAACAATAATATTCATAAAACATACCTCGCAGCAGGTACTTTCATCGATGGTCATTTTGTAGAAATGCCTGCAGTCATAAATGAGGACATCGACCTCGCTGGGACCTCATTCTGTCCTCTGCCAGAGGACGACAAATACTTGGATGATATTCATCTGTCAGAACTAACACACTTCTACGAAGTGGATATTGACCAATCCATGTTGGATCCCGGTGCCTCAGAAACCACGCAAGGAGAAAGTCGGATTTTGAATATGATTCGACAAAAAAGCAAAGAGAATACCGATTTTGAGGCAGAATGTTGCATAGTGTTAGATGGAATGGAGTTGCAAGGGGAACGTGCAATATGGGCAGACTGTACCAGCTCTGTGGGCGCCGAGGGCTTTCTCCTGCAAGACCTTGGCAGCCTGGCCCAGTTCTGGGAGTGCTGTTCGTCCAGCTCTGGCGATGCCGACGGGGAGAGTTTTGCGGGAGACTCCCCGGTTCGACTCTCCCCGACCTTAGACAGCACAGCGCTCAATCCGCATTTGCTGGCCGGCAATCAAGAGCTCTTTTCAGATATTAATGAAGGATCTGGTATAAACTCCTGTTTTTCAGTGTTTGAAGTGCAATGCAGTAATTCTGTTTTACCATTTTCTTTTGAAACACTCAACTTGGGAAATGAAAATACAGATTCTAGTGCTAACATGCTTGGGAAAACACAGTCTAGATTACTAATATGGACCAAAAATAGTGCCTTCGAGGAAAATGAACACTGTTCTAATCTTTCAACGAGAACTTGCAGTCCGTGGTCCCATTCAGAAGAAACACGTTCAGACAATGAGACGTTAAGCGTCCAGTTTGAAGAGTCCACACAGTTTAACGCAGAGGATATTAACTATGTAGTTCCTAGAGTCTCGTCCAATTATGTAGATGAAGAACTCCTAGATTTTTTGCAGGATGAAACTTGCCAGCAAAACAGTAGGACTTTAGGAGAAATCCCAACGTTAGTTTTCCAAAAAAAATCTAAACTAGAATCTATCTGTGGTATTCAGCTAGAACAAAAAGCAGAGAACAAAGCCTTCGAGACGACGCAAGCGTGTAGTGAAGGCAGTCCGCGTGGAGATGGCTACAGCTCAGGGGTTATTAAAGACATTTGGACAAAGATGGCAGACAGAAATTCTGCAGCTCCACTAGAAATAGAAAGCGTTGACGATGAGTTGTTTCCGACAGATGTAAATAACTACTGCTGCTGTTTGGATGCTGAGGCTCCAATGGAGCCCCTCCAGGAGCCAAACAAGGCCGTGCAGAGATCAGAATACCACCTGTGGGAGGGCCAGAAAGAGACCCTGGAGAAGAGAGCCTTTGTGTCCGGCGAGCTGTCCAAGGTGGATGGCGGGGACTACACCACCCCGTCGAAACCCTGGGATGTGACCCAAGACAAAGGGAGCTCATTCATCCTGGGAGGGGTTTACGGGGAGCTCAGAACGCTCAACAGCGATGCAGGGTGGGCGGTCGTACCGCCCAGTCACGCCAAAGGGAGTTTGCTGCAGTGTGCCGCTTCTGACGTGGTGACCATAGCGGGCACAGATGTCTTTATGACCCCCGGAAACAGCTTCGCTCCTGGTCACAGGCAGTTATGGAAGCCCTTTGTGTCCTTGGAACAGAACGACCAGCCGAAGAGCGGGGAAAACGGATTGAATAAGGGATTTTCCTTCATCTTCCATGAAGACTTACTAGGAGCTTGTGGCAACTTTCAAGTTGAAGATCCTGGACTCGAGTATCCCTTCTCTTCTTTTGACTTAAGCAATCCGTTTTCACAAGTTCTCCACGTAGAGTGTTCCTTTGAACCCGAAGGGATTGCATCTTTCAGTCCAAGCTTCAAACCGAAGTCAATCCTCTGCTCTGATTCCGACAGTGAAGTTTTCCACCCCAGGATATGCGACGTCGACAGAACACAGTACCGGGCTATCCGGATCTCCCCCAGGACTCACTTTCGCCCCATCTCTGCATCTGAACTCTCCCCCGGAGGAGGAAGTGAGTCAGAATTTGAATCCGAGAGAGACGAAGCAAATGTTCCCATTCCTTCTCAAGTCGACGCATTCGAAGATCCACAGGCAGATCTCAAACCGCTTGAAGAGGACGCAGAGAAAGAAGGCCATTACTATGGGAAGTCCGAGCTTGAGTCTGGGAAGTTCCTCCCCAGGTTAAAGAAGTCTGGGATGGAGAAGAGTGCCCAGACATCCCTGGATTCCCAGGAGGAGTCGGCCGGGGTCCTGCCAGCAGGAGAGCGGAACCCGTGTCTGGAGTGCAGCATGAGCGAGCCTCTGGAGATCGACCTGGAAAGCCCAGAAGCAAACTGTAAAATAATGGCACAGTGCGAGGAAGAAATTAATCATTTCTGCAGCTGCAAAGCAGGTTGTCAGTTCCCTGCTTATGAAGATAATCCAGTTTCTTCAGGACAGCTGGAAGAGTTCCCTGTACTGAACACTGACGTGCATGGAATGAACCGGAGTCAAGAGAGACAAACCTGGTGGGAAAAAGCCTTGTACTCGCCTCTCTTCCCCGCCTCGGAGTGTGAAGGTGTCTTCTGTTTATGAAGCGAGGTGCACAGCAGAGCAGGACGCCGGAGCCCAGCCCAACGGCTTCCACCGCACGCCGCGCTGCAGCGCCGGCTCCGCCGCGGAGGACTCCGGCTCGGAGGGTGGAGAGTTGAGGACAGCTGTCCTGTTGAAGATTTTCTTTCTTTTTTTTTTTTTTTCTTCTTCTTCCAAGCTGTTAAAATTCTTGGCTCTCTGAACTAGACTAGAACCGGTGTGCATGTGCTCGTCTTAGAAGCATCACTGCCTTCCGCGTCCTCTCGCTGCCGCAGCCCTCCCCACCTCCGGCCGCAGTCCGTCACCGCCCCCCCTTGCTAGCACCGCAGCGTCAGCGCCCACGTCCACTCCTCAGAGACTCTAGCTTCGGGGACACGCAGGCTCTGTCCTCTCCGAACTGGGGTGTGAATGCTTACCCCTGCGGCGGGTCAGTGCCTGTCTCCGGAGGCCAGAGGGCAGCCTGGGTGACTCATCCCCGGTCTCCATTCAGTAAAAAAAAATCTCATGTACATTTAACGTAGGAACTGCAAGGGTGTGCTTTTAGAGACTTAACAAAAATACTGTGTTTTCTATCTTAGGATCTTCCCCTAGAGTATGTACCATGGACAGTGCCATGGTCGGTGACCTCCTCGCTAGCTGAGGCAGCCAAGGACTTGGAGGTATGGGGTGGCATGTAAGGCCAGGTGGGGCAGAGGGCGGGGCAGTGCACCCCAGCCTGCTGTCGTCGCAGTCTCTTTGCCCGCCCCCGACACCGGTCAGGGTTTGCGGTGAGTCTTGGCAATACTCGGTGAGGACCTGGGTTGCAGGTGAGATTCTTGCAGTGACCGACATGGAATCCAAGCCCCTCCCCCCGCCCTAGAACTTGAGATTGTAAACGTCTGACCTGAAACAAAGGCCACCTCACGACCCCAAAGAGACCTTGGCTGCAGCAGCTGGCTGCGCTCCTGGCTCTGACTTAGAGTAGCTTAGATCTCCTTTTGTGTTTGAGAGAATGTTCTGGGCAAGTTCTGTGTGGCGGGTCTGAGAGCAGAGTCCTGGTTTCTCCCGTACCGGTGTGAGGGCTCCACGGGGCCACTGGCCCGTGTCGTCGGGAAGCCAGGGCTCGGTCAGTCTCGTCCAGGCCCATCCGTTTCACGACGGTCACTTCCTCAAGCTTTTCACACCGCCGCGCAACAGGCTGAAGTTAGAAGGAGCGATATTTGCAAAACCTAAATGTTTAAAGTTACTTTTCTTTTATTAACCGACGTGTGAGATCAGTTGAGCGTGTCTGTAACGTCGGGAAGTCTTAACTGGATGAGACAGCTCCACCACTGATTCTGGCAGGCACTAGACACTTAATATGTTCTAGCTGGGAGCTGAGCTGGCCGAGAATATGAGGTTTGCTTCAAGCATTGGGTTTCGTTGCCTTGCCTTCATGATGACACAGGAAACTCCCTCCAGGGCTGTGGAGTCACCCCCTCCCCCGGCACTCTCTGTCCTCACTGTGGGAAACCTGATGGGCCGTGGGGTTTGGTCTCACCACACGTCAGGGTTTGTTTTTATACAGCACATCTTTGACACTTTAAAGTGGGTTTGTGTGTGTGTGTGTGTGTGCGTGTGTAAGGTTTTTATGTTGCTGTTATTTATTTATAGACTTTATAAGGGTTTATGTATTTTTCTTTCTTCCAGAGCTTCCTAAAAATTGATTAGCATCTGCACTGAAATATAATTTTTAACAGCAAAGGCAAAAAAAGAATTGGAAGTTGTAAAATTCCTTTAAAAAAATCACTACAGTGACGATCATCCTAGAAATCGTTGCTCGTGTAGCCGAGACCAAATAAATAGATTTCAGACACAACCTTTAGCTCGGTGATTTCGGACAGCTGCTTTTTTTTTTTTTTTTTTAATCATGAAAAGGCTCCAGGTGGTCACGTGCAGACTTCCTCACGCTGGTGGGAAGGCGAGGCACCTCCCACGGGAACGGGAAGGGATTAGAAATGGGCGAGGGAGTGAACAGATTACTTATTTATTTGTTTTTGTAGCTAAGTGGCTGAAGCCGGAGGCGCTCAGCGACAGAGTTGAAAGTTGTGGCTTTCAGGTTTGTGAGTGAGTGATCACAAGGAAAAAGCATCTCTTTAAAAAGCTGGCAAAACGCCGGAACACACTGTGGTATGAGGCGCGCTGCACGTCTTGGCGCTGAAGCGCCCGTTCCCCTCCTGGGCCGAGATTCTTTTCCCGTGGCCGTATCGTTCTGATTTCACGTGCACCACAGTAACCGATTTTTTGTTTTGTTTTGTTTTCTTGTGGAGTTAACACCAAATAAAAAAGTTAAAAAGCCG EMBV3_02427 GGAACTGAAACCCCTATCCCATCTACCTCCTAGAGCTGGAATATCAGATGAGCAACACAC Gene BVV0102_306173 - 1 EMBV3_10626 GK000010.2:87051825-87110379 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40480 TGGTGAGGGGCGGCTGGCTGTGGAGACAGAATGTGCAGCCCCCAGAAGGCCGGAGCCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11638 GTCAAGATCGAAAGTCAGAAGCTGAACTTCAAAGAAAAGGCCCAGGCAAAGGTGGGATCC Gene GeneID:281295|MAP4:NM_174105:28_cdna Constitutive 1 NULL GeneID:281295 22 GENE MAP4 NULL microtubule-associated protein 4 EMBV3_18411 GTCATCTGTGCTGTCACTGCACAGGTACAGTCTGCATGTAACTCTATTAGATCAGTAATA Gene GeneID:512334|GLOD4:NM_001101953:106_cdna Constitutive 0 NULL GeneID:512334 19 GENE GLOD4 MGC179552 glyoxalase domain containing 4 EMBV3_25924 CCTACAAGGACTCCATTAAAGCATTTGCAGAAATCTGCAGACAGAATAAGCTCATTCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01377 GTGCTGAGGTTAGCCAGGCAGGAAATGGCAGTGTAGAAGCCTGAAGGCAAGGAAAAGGAT Gene BVT0102_023580 + 0 NULL GK000017.2:67367179-67407098 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26781 CAATATCTGCAACGTGGTTCTGATGCGATACGGGGAGCTGGAGGAGGGAATTGACGTCTT Gene GeneID:528468|SFXN5:NM_001075914:13_cdna Constitutive 0 NULL GeneID:528468 11 GENE SFXN5 MGC140573 sideroflexin 5 EMBV3_03199 CTGTTTGACCGAACGGGGGATGGCAAGATCCTGCAGACTGTGGCCAAGAACAAGGACCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41714 TTTTGCCAAAGACCTTGAAATGTTTGCAAGCTAAAATACATCACAGAGAAAAATGAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23219 TCAGAATGCTGACAGTCCTCCTCCTCCTTGATATCAAATATGCCGTCATCGGGACTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39912 CACATCTGGACTTGAGTTTCCTATTTAAATTTCTTGGTAATATTGTGCCAAGCCTCCAAA Gene GeneID:533927|TSNAX:NM_001076006:87_cdna Constitutive 3 NULL GeneID:533927 28 GENE TSNAX MGC142669 translin-associated factor X EMBV3_35197 GAAGATGGCTGTGGGGGCTCAGGAAGTGGAGAAGTCAAGAGGACACTAAAAATCACAGAC Gene GeneID:522828|GPC5:NM_001102070:32_cdna UTR3_Alt 2 NULL GeneID:522828 12 GENE GPC5 MGC166256 glypican 5 EMBV3_42204 GGGAACGGTTGGGTGAAGGCTGAGAACTGAAGAGAATGAGAAGTGATAGAGTAGAAAAGG Gene BVV0102_273527 + 0 NULL GK000001.2:95206792-95475795 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02719 CATTAGTTGACTTGGACATGGCTGGGAGAAAAATCCCTGAGCTTGAGAGTGTTTCACTGG Gene BVV0102_137070 + 0 NULL GK000030.2:43768397-44354490 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37807 GAAGAGTGGTGCTTCGGGTCAGAAGGCGGAGTAGTAACATGATGATTCCTTCTCTTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30805 AGATGGGAAAGGAATATGAACCCAAAGCCACTCACCTGGTCCCCGGCTCCCTGGATATAT Gene GeneID:100296486|LOC100296486:XM_002700098:221_cdna Constitutive 0 NULL GeneID:100296486 X GENE LOC100296486 NULL similar to glyoxalase domain containing 5 EMBV3_41709 TGATTCAAGATGATGTTGACCTCCGTGACACTCGGAGGCACTGTGACAAGGGTAACCTGC Gene GeneID:538626|P4HTM:NM_001076115:253_cdna Constitutive 0 NULL GeneID:538626 22 GENE P4HTM PH-4 prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) EMBV3_28337 TCCCCAGGCAGAAATAGTTGTGTGTGCTCCCAAAGCCCTTGGTTCATGCTTCTACTGTGA Gene GeneID:532621|THRA:NM_001046329:157_cdna Constitutive 0 NULL GeneID:532621 19 GENE THRA MGC137819 thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) EMBV3_11984 CACTGGGTTGCATCTCACTTGTGTTCTCTCTGTGAAGAAACTGCAGGAATAGACATTTCT Gene BVV0102_054220 + 0 NULL GK000001.2:44490896-44546052 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01882 ACATTCCCTGTGCTCGGGATTCGGTATTATATGGCTCATTAGGATCTGTTGTGGCTGGCC Gene GeneID:615660|FAM36A:NM_001040585:107_cdna Constitutive 0 NULL GeneID:615660 16 GENE FAM36A MGC133496 hypothetical protein LOC615660 EMBV3_34642 CAACCCAAACTTCAAGTCTACCTGTCAACGCAACAGGAAGGTAGTCAAGTGTCCCGGAAA Variant GeneID:515228|MRPS23:NM_001046192:24_cdna 320^446 2 EMBV3_02312 GeneID:515228 19 GENE MRPS23 MGC134172 mitochondrial ribosomal protein S23 EMBV3_40362 CGTGGGGGTGTGGGGAGGGCATGAGATAACCTTGACATCTGAGTGACTGAAGAATTGATT Gene BVV0102_134218 - 1 EMBV3_17488 GK000021.2:67431510-67457236 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40256 TCCCCACCCCCCAACCATACCCTCTCATTATAGAGCCAGGTGTGAGGGTCTGAGGAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42093 CCCCATGGCTTCTCTCTGAGGAGGTGGGCATAGAGTACCTCTGGTGACGAAGTTGTTTTA Gene GeneID:507962|KDM5A:XM_002687904:53_cdna Constitutive 0 NULL GeneID:507962 5 GENE KDM5A JARID1A lysine (K)-specific demethylase 5A EMBV3_28251 TCTTGGCAATGATTGTGCCCCTGGTCCTCCTGGCAGGTCTTGCATTTTGGCTTAGGAAGA Gene GeneID:515418|CD1A:NM_001102024:9_cdna UTR3_Alt 2 NULL GeneID:515418 3 GENE CD1A MGC152638 CD1a molecule EMBV3_34533 ATTGAGGAATCCAGTTAGGTTAAGACAGGGGGGAAACAGAGAATTTGAGTTGGTGAAGAG Gene BVV0102_173961 + 1 EMBV3_10020 GK000002.2:81275828-81639830 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28748 CTTCCTTCTTCTCATCGCGGTTGCTGGACTGACAGATGTCATCAATGCTTCTTGGTGGGT Variant GeneID:510619|TSPAN31:NM_001037595:989_cdna 273^392 1 EMBV3_42532 GeneID:510619 5 GENE TSPAN31 MGC133819 tetraspanin 31 EMBV3_40635 GGATGGATAAGCACCCTCCCATGGCGGGAATTATGTCTTCTCTCTCATGCATCTGGGTCT Gene GeneID:539433|DCAF11:NM_001014954:228_cdna Constitutive 2 NULL GeneID:539433 10 GENE DCAF11 MGC137750 WDR23 DDB1 and CUL4 associated factor 11 EMBV3_15360 AAAACTAAAATATCCCTTGAACCAGAACAGGTCATGCCTCAGCTGCTCAACTACCTGAAG Variant GeneID:512079|PDCD2:NM_001046109:2_cdna 831^944 1 EMBV3_38196 GeneID:512079 9 GENE PDCD2 MGC134365 programmed cell death 2 EMBV3_06395 GAATGGGAAGAAGGTCTGCCTGGAATGTGAGATGACCTCTTAACCAAATCCAGAGTGGCC Gene BVV0102_237398 + 0 NULL GK000005.2:107436914-107445595 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31004 AGTGTCAGCAAAAGGCAGAAGAGGGTTTTCTAAAGTTCTGTGAGAATGCGGACTTATGGC Gene GeneID:533900|RFX4:XM_002687661:33_cdna UTR3_Alt 2 NULL GeneID:533900 5 GENE RFX4 NULL regulatory factor X, 4 (influences HLA class II expression) EMBV3_07278 GACATCCCAGCTACCCTGAAATTCTTCCATAGTCTCTTAGCTACCAATGCTAAGATTCTC Gene GeneID:613413|HNMT:NM_001035434:14_cdna UTR3_Alt 1 NULL GeneID:613413 2 GENE HNMT MGC137515 histamine N-methyltransferase EMBV3_26818 GCACGTTGCAGTCCAAGTTTGTGCTGTTCGGAGCCACTCTCGTAGTCATCGGCTCCCACG Variant GeneID:512653|RABAC1:NM_001075575:196_cdna 457^558 2 EMBV3_35749 GeneID:512653 18 GENE RABAC1 NULL Rab acceptor 1 (prenylated) EMBV3_33780 TACCTCGCAGGTGGAGAGACCATCTACCTAGCCAATTACACCCTCCCAGACTCTCCCTTC Gene GeneID:281175|FUT2:NM_177500:32_cdna Constitutive 0 NULL GeneID:281175 18 GENE FUT2 sec1 fucosyltransferase 2 (secretor status included) EMBV3_00404 GGAACTTGAGGCTAGTTAGTATCACACTCAGGCCACGCTCAGCATTTGTCCACTCTGTTG Gene GeneID:533484|DHX40:NM_001076897:33_cdna UTR3_Alt 3 NULL GeneID:533484 19 GENE DHX40 MGC142364 DEAH (Asp-Glu-Ala-His) box polypeptide 40 EMBV3_02006 TTGCAGAAGGAGAATGTGCAAAACAAGACCTGACGACTAAGAATTCCGTTGATGGTGCTG Gene GeneID:537506|MDGA2:XM_002690859:235_cdna Constitutive 0 NULL GeneID:537506 10 GENE MDGA2 NULL MAM domain containing glycosylphosphatidylinositol anchor 2 EMBV3_06835 TACCGCTGCTAAATTTGAAAACAAGGTAGAAGACCTATCTTCAGAGCTGCCAAGCCGAAG Gene GeneID:532412|SGOL2:XM_002685485:208_cdna Constitutive 0 NULL GeneID:532412 2 GENE SGOL2 NULL shugoshin-like 2 (S. pombe) EMBV3_39773 ACAAGCTCAAGGTGCACATGAGGAAGCACACGGGCGAGAAGCCGTACCTGTGCCAGCAGT Gene GeneID:788491|ZBTB7A:XM_002688922:94_cdna Constitutive 0 NULL GeneID:788491 7 GENE ZBTB7A NULL zinc finger and BTB domain containing 7A EMBV3_16765 CCCCTTGTTGTAACTATTAATGGAACGGTATAACCTTGTCCCCTCCTACCCCACAGGGAG Gene BVV0102_234015 + 1 EMBV3_06922 GK000020.2:25700516-25965174 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31670 CCTCTCTATTCAGGGATCTCCATCCGCCTGGGAGCCTTGTTCTTTTCAGCCTCAATACTC Gene BVV0102_198888 + 0 NULL GK000007.2:17403238-17499952 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01499 AGATTAAGGATGTAGTTCCTAGAACAAAGAATCCTCTGCTCTTGAGGGAAGAAGCATCTG Gene BVT0102_361202 + 1 EMBV3_19051 GK000010.2:38151657-38159316 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020622 1 XLOC_011297 NonCoding TCONS_00020622 XLOC_011297 NonCoding NonCoding - 10:38152120-38157107 - TSS14512 4987 4 TCONS_00020622_4 77 1 0 0 0 0 1.18939929664985e-07 0 0 8.35273342658173e-08 3.55807473438453e-06 1.26571181995657e-05 2.80514821273671e-05 4.1312871887498e-05 4.23031639808649e-05 8.0549166628617e-06 3.49002606327573e-05 2.1643579453328e-05 0.000799708175746344 9.65442271440698e-05 0.000286782060517213 0 0 0 0.000485088867686678 0.000209713679770838 0.000416847196500104 0 1.20085160512356e-05 0 4.42990390990377e-05 3.5044283653693e-05 0.000270050304602881 XM_005211595.1 TTBK2 PREDICTED: Bos taurus tau tubulin kinase 2 (TTBK2), transcript 0.0 7514 100.00 0.835171445758973 XM_005254171.1 TTBK2 PREDICTED: Homo sapiens tau tubulin kinase 2 (TTBK2), transcript 0.0 1746 75.00 0.529977942650892 0 noncoding CCTTGCCTTTCTCAAAAGCTGAGTTTTCAATCCCCTGCCCACTCGTTTTCCAGCACCCACCAACAACTGATCGATCATTTAAGACTTTAAGACGGAGGGGCTTTTTAGGATCCTCAGCCCACAACCCTTAAAAGTGCCGCCACCCTGCACACAGAATCGCCGTCTTTATTATCCCTTATACGTTACACAAGGTTAATAGTTCAGCTACTTTGCAGTTATTAATAGGCATACATATGATTAGTTTCTGGTAGCTTGTTATTTCTTAATTTTTTTTATTTCAAAAAATACGAGAATCACCTCTTTGGATGTTGCTGCTCACTGAGAACTCAAGAAAGGGAAACCGGGCTGAGAAAAACAAATGGCACTAATATTTCAGGCCAAACCAAATCAGGAAGGGTGAAGCAGTGCCCGCATGAAAGCCTCCTGAGAGGTCCCTTGGTTCAAAGGACAAGGAAAAAGAGGGGATGCTGGAAAGCAGAAATCACTCCAGTGATACAGGGACGTTTCCTGCAGAGAAGGGAAAAATACCTCCCAACAGCGATACAATGATGGGTTGAAACAGAGCTTTTAACACTTTCAGTTTTATTACATGGGGAACCCTCTCCTCACATCTCTGAACCCTGGTTGTTGTCTGCAGGGGAAATTGAATACCTAGTTTCTATTCCAGCGCTTCTTTTTCTAGGTCACTTCTGGATGTGGTACTGCATTTATAGAACACTTTCTGCTCCCTGTTGATCCTGTGACCTCCGGTGCATTCAATAACCTTTAAATTAGAAAAATATTTCTCACCTCTGAAATCCAAACCATCACACAAATAGAACTAGAGTTTGCATGCGGAATGAATATTTTATTACTAGATTATAAAAATAAAATACAAAATAATTTTAAAACAGAACTTAAAACACTGTACAAAGCTTTAATATGATACAAATGGGAAAATTAAATAAATAATTACACTTTTATGTACAGATGGCCTATACAAAAGCACTCATGTTTCTGCCAATACTCTATGTCCTTGGTTGCCTGAGCAAAAATGCATAAAGAGGGCTGCTTGGAGGGGAAAGGGATACAATACAATACCTTTGGAGGTATTTCAAAGAGCAGTTTCTCATCAGTGATTTCATGAAGAGAAAAAAGGGAGAAAACTATGGAACTGTTAAATTACTCTAACTTGTCTTACTCGATGAGTGAATTCTTCTGGTTTGTGGTTCCATCTGATTTAAAAAATGCCAGTAGTTAGAAACTTTCAAGATTTACATCTAATTCAAAATTAGGTGCTTCTCAACTCTCTCTTTTTTCCTAAAAGCTGTAAACTTGTAAGTAAATGACCCAATGACATCAGCACTTGGTTATTTTAGGAAAGGAGTCAGGAGGGGAACCAGGAACTGTGCATGAGCAGTGAGGAAGCGTGAGCCTGGGTCATCTGTTTTTTTCGTTACTCAGTTCACAAGTTCACACAATCCAATTTCAGAGCCCCAGTGGTACACGTTGTATTTCCTTTAGCTTCCTCTATTTGTATTTCTGAATTAGTGAACTAATTTATCTAACTGATGAATAGTTTAAAAAGAAAAAAATCCCAAGGGCTTTCCCTTCCCTGTGTTGATCCCTAAAATATACTCTGGTAGGTCTGTTTATCCCTTGTGGATGAGAAGAACACCCAGACAGACCCCAGGGATGCTGAAGTTCCATATAGGAATTTTTAAGGATTTGAACTGTATATTTTAAGGGGTGGGGGGGGAGGAATATATGGCAGGGGTAGTCTATATAAAAATTAGATTTACCCAGTGTTTTTAACTTGGTGAGTGAACACTTATGTACACAACATGAAACAATATTAAACTACTGAAAAGAAAGAGAAAATTTCCTATCATTAGTGTGTAAAATTATGTCAGCAAGTTCTATAGTCACATGGGCTCAAAGGTCTGCCTCATGGAATCCCATTCTCTCAGTCAAGGAACCCAGAATCCCTGACCCAGAGCATCCATACTGTCACTTCAATTAAAGAGGCAGATCCTGTTAAAGTTTCACAGGGCAATGAAGAAAAAGGCTTCACCTCCTTTACATGTCTCCTTAAGACCAAGAATCCAGCAAAATCTATGGAAATAATCATCAAATCATTACTGAGTAAAGGTTTTTACTTGGCTCTTTAGTGTTTTAAGATTGTGGATCAGGTCAAGGTGACTTTGATCTTGTCACATACTCTGATTCTTGGATCTGCTTAAGGGAAGTAATTAAACATCAAGCTTATGTTAGTTTTAAAATTTGGAACAGATAACCACAACTGAACTAGAAAATATACTGATGGGTCAAGAATATAATTTCAAGAATTTGAGGTGTGTAGCATCCAAATTTCCCTTTAAATCAATAGGGGGATCCTTGTCCCATTTGCTGGAGTTACCTAAGAACTATATGAATTCCCCATTTATTGCCTGCAGTTCTCCCTAGCAGTGCTGGCAAGAGATTCTGCAGTATCCTGAGTCTAACTGGCTTAAATTTCTCATGATTCCAGAGAGACAGCCAAACTCTGGAGAATATCCAATGATATGTTTCCACACTACTCCCACATCCTTGAATTCTATACCAGAGTTCATCCCACTGGATGAAGTGGGACGTCCTAACAACCACCTGGGGTTTCCCATGAACTACTCTTTCTGTATGTCTGTGGATTAGAACTGCCTCTTGTTCCCATCTCTAAGTTAAGGTCTAAATATGCACCTGTGATTCCTGAACTTGGGTAAATATTGACATGTGAGGACTACCACAGTGGTTACATGCCTTAATCCTGAATACTTTGTTAGAACACAGATGATGTTCTGCAAACAACTGTCTATAGTACCAAACTCAAGAAAATTAAACACAGTTGTCATCAACCATTCTATCTCCTCAGTGATACAGGTGCTGAAATCTCTCTCCTTTAGGCAAAGTCCCAACACATGTGTGGTAAATACATATAAACAGAAATGGGCAGATTTTAAAACAATGAATGCATACAACTTCATTCCAAAACACATAAACATGACAAAAGAAATAGTTCCCTGACATATGTCACGCTTTAATATCAGGAATGAAAAAGTTTTAAAATGTGAAAATTCTGACCTTCAAGGCTAAATCTAGACTTATCTACAAATAAATGTGTTTTCAAGTAGCCAAAGTAAGATGCATTTTTCCCTTAAGCCACTAAATTCTGAATTCTAGATCCTTTTTCTCCTATCACCAATTCTAATGTTAGATTAAGAATGTAGTTCCTAGAACAAAGAATCCTCTGCTCTTGAGGGAAGAAGCATCTGTTTTTAATTCAAAGCTATTGGATATATAAAAACTAGTTATGGTTTTAACTATCTGTGTCTGGGTTTATAAAACATGCACCAACATTTTCCTTTGTCAATTAAATATAACCATAGAAACATTCACATAAAAATCTGTGGCCTGGAAGGAATCTCTGATGATTACAGAAGAACCTCAAGTTCCTGTAGTGGCTAAGAGTGACACAGAGAGACACTGCACCCTAGTCCACTGGATTCGTAAGCAGCTGAGATTTGTTTAGTGTTTCAAAAGCAAATACAGAGTGGATAATGGCAACAGTGGGTCTCAATTACCATTTTGCTAGTTATTTAGGACTTGATTAACTTGGCAACTTAAAAAATAAGTTTCACTTCACAACATGCAACTTAAAAACCAGAATGTAACTATGCTGCTGTCAGCAAGGCGGGCTTGCACACCACAGCTGAGAGTAACAGTGTCTATTTAAGACTCACCATTCAAGCGTGTTTATAATCTGTGCTTTACAGTTAAATTTGCTATGACCCAATTTTCATTCTTTGTTCACTATACGTTAGAGTTAAATGCCTTTAAGCTGTGCAAAAGACTGCTGTGTGGAATTTTAATATTTCAAACAATCTATACACCCTGGAGATTTGGCAGCATAATTTAGGAGTAAGCTACCTAAAGAGACTGAGCTATGGCTAATTTCATCTTCTGCTCCACCCAAGTAATTCCAGAGACTGGACAAGGGAGGGTAAGGGCAAGTGTGACAAGGTAACTAACCATTTTGTTGTGATAGGAGAATCTAGGAGGCACTTGGTTTTCAAAAGGTAATTTTAACTTTTTCCCCATACTACTCTTAATATAGTTTGGCTTGACTTTAAAGAATAGCCAAGTCCCTCATTTTAGAATAACCAAACTGGTTCAGAATTACTTGGATGACCTATGTCACTGAAGTGTGAAATATGCCACCACTAAAAAAAATAATAAATTTAAAAAGAACAATAACAACAAAACCCAATTCATTTTCTGTATCATACAGAAATAAAAACAAAAACCCTTGTGCCAAAAGTGCTTTGCTCAGGGCTGCCAACTTCTCTTTTTGGCCCAAGACATCTAAAACCATAGAGGTTTTTTTTTTTTTTTTTTTTTTAAAAAGCAGAGTAAATCTCTATACAAGACAGTCCTTTTAAGTGGATATATTGATACATGAGATATAATTAATCTTTTTTGAAAGTATCCAAGCAGAAATATCTTTGGTTAACTCTTTTTCTCTATGTGCAAAATAAAACATTCTTACACAGCAAAGTTTTCTCTCTGGATCTTGAGTTTGTCAGTGCCATTTAGAAAAAGGGGCAACACAGTGGAAAAGTTGGGAGAAAAACGGAAGGACTCAAGAGAGAGAGAAAACATTCAGCTGCCATGTTGTCATCACTATCAGGTTTAACTAGCAGAGACGTGCCCGTAAGAAGTGAAATAGCATACTTCATACTGTTTGCAGCCTCATCAGTTTTTCAAATAGTTACCACAAGCACATTTCTGATTAGAGGGGTCAGGATTTAAAGCTGGCTACTTTTAGCACAATTTTGCTAATACAACAGGAAAAACAAGATAATTTCTTAATTACAGATTACTTCTTACCTCCACCCTGCCCCTGACAAAGTGAGATGAAAAGAGGAAAGCAGAATGGTAATTTTTTAAGAGATTAAAAAAAAAATCTATTTAT TCONS_00016902 TCONS_00016903 TCONS_00016904 TCONS_00016905 TCONS_00016906 TCONS_00016907 TCONS_00016908 . 3' 437 TCONS_00016902 TCONS_00016903 TCONS_00016904 TCONS_00016905 TCONS_00016906 TCONS_00016907 TCONS_00016908 . 3' 5423 EMBV3_43481 GGCTCTGTTTAGCCTCTATCAGCATATAAGGGGGTTTAAGAGTTGGGACAAGTTGAGCGG Gene GeneID:613942|CHODL:NM_001101228:10_cdna UTR3_Alt 2 NULL GeneID:613942 1 GENE CHODL NULL chondrolectin EMBV3_29440 AAATGTGGCTTCATACACTCACACACAAACTTGGCTTCGGTTTTCTCCCCAGCGACAGCC Gene BVV0102_191837 + 0 NULL GK000025.2:10251927-10288887 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146208 TCONS_00146211 TCONS_00146209 TCONS_00146207 TCONS_00146210 1 XLOC_089053 Coding TCONS_00146211 XLOC_089053 Coding Coding LITAF 25:10287379-10325038 j TSS109387 2383 1 TCONS_00146211_1 161 5 0.936852727176164 2.56185173443959e-09 1.57875068733979e-27 2.08627994819839e-12 1.050829910706e-29 1.35127092787655e-08 2.38911522310729e-32 5.80214348969748e-05 1.24069006680602e-05 7.21141543873982e-10 5.08634271604704e-06 3.79244758681786e-55 2.85498179623792e-11 9.65404862274441e-17 6.90865261746556e-05 1.0190058536053e-13 0.00470544606347347 4.2354791564606e-07 0.00630591163990026 3.0917618677208e-28 0 2.54765531969329e-05 0.000502951119469047 0.00036282342626344 0.00416567566466963 1.30962735833402e-36 2.35272245858173e-05 4.45650645965692e-29 0.000515340227210976 5.50550637426028e-12 0.000157960372223611 XM_005224463.1 LITAF PREDICTED: Bos taurus lipopolysaccharide-induced TNF factor (LITAF), transcript variant X1, mRNA. 0.0 3119 100.00 0.725136382710869 NM_001136472.1 LITAF Homo sapiens lipopolysaccharide-induced TNF factor (LITAF), 0.0 704 86.49 0.248006714225766 TCONS_00146211_1 sp|Q9JLJ0|LITAF_MOUSE LITAF_MOUSE Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog; 5e-97 281 91.93 0.993788819875776 1 coding 1 1 1 1 0.0825676793989208 0.550864283322174 -0.00524309349119542 0.956867992072937 CCGGCCGCCTTCCAGCCAGTCCGCCCGCCAGCTCCGTCTGCTCAGACCTCCCGGCTCGACTGGCGGCGCGCGCGGCGGTAAAATGTCTGTTCCAGGATCCTACCAGGCGGCCGCTGGGCCCTCCGCGGTGCCGACTGCACCCCCATCCTATGAAGAGACGGTGGCTGTCAACAGTTACTACCCCACACCTCCAGCACCCACGCCTGGGCCGAACACGGGGCTCATGACGGGCCCGGATGGGAAGGGGATGAACCCACCTGCCTACTACACCCAGCCAGTGCCTGTCCCCAATGCCAATGCAATTGCCGTGCAGACCGTCTACGTGCAGCAGCCCATCTCCTTTTATGACCGCCCGGTCCAGATGTGTTGTCCTTCCTGCAACAAGATGATTGTGACGCAGCTGTCATACAATGCAGGCGCCCTCACCTGGCTCTCCTGTGGGAGCCTGTGCCTGCTGGGGTGCATCGCAGGCTGCTGCTTCATCCCTTTCTGTGTGGACGCCCTGCAGGACGTGGACCACCACTGTCCCAACTGCAAAGCTCTCCTGGGCACCTACAAGCGTTTGTAGGACTCAGCCAGGCCTGAAGGGAGCCGTGTGCTGCAGGAAGGCCTCTCCGACTCTTCACCCAGCCCCTGCTCCTGAAATACAGTTTGTTTGTATAACATCGGAAGACATGATTCCTAGGACTGAAGCAGCAAGCTAGAGTTCTCAGTTCGCTGCTGTGTCATCTTTGAAATCAAGACAAAGCCGGGCTGGACTTTCAAGAGTCCCTGTTTTGATAATGAATAGGCACAAGGAATGCATGTGAATAATACTGTGTAGAAATCAAAGCCTAGACATTGATCAAAAATCTGTATATTGGGTGAAAACTATAGTCATAACCCATTGATTCAGCTTATTCATTTAACGTTTTGAAACTTCCAGTAATTATTTTTGCAATGACTATAGATATACTTCATAGTACTTTGTTCTCTGCTTTTCAAAAATAAAGTCTTTGGTTCACTCCGTGAACTATTTATCAATTCTTGCCATGTGAAGAAAGGTCTTATGTTGTGTTTCCAGCTGTTGTTACAAAGAGCCTTTATTTGTTCCATAACAGTACAAAGTCCTTCATGATAGAAAACTTCAGACTGGCTGAATATCCTGTGATGTCAACATGAGCGATGGTGAGTTGGGTGGATGGCTAGTGAGTCAGATTTGAACATGAGGCCGTTGGAACCCAGTAAACATCATTAGTGGCAGCAAGCCGTAGCTTTCAAGTTTTAATAAGATGCACAGAAGGAAGCTGTTCTCATTCATGCTCCGAACAAAACATGCTTTGTTAATTGATCGGGGTAGATGTGAGATGCTAGAAGGAGGGCATTGTAACTCGCCAGGACTATGAATGTCATCCCCTCTTTTCCTACCTGGTGATAAAACTTCATTTTGGAAGGTGACGGTAAATTGTGTCATTGCCGTACGACTTTTATCAATTTAAACCCTAACTTCTGGTTTTGAAAAATTGCCACTCACCCCAATCATGAGCGTGTATTTTTCTTTCTCTTGACAAAATTGAAGGCCATGCATATTTAGCAGTTTTGCTCAGATGGTGGCATATAAATTGTCTCAAACTGTTATCCATTACATATGCAGAGTCTTCAAAATCTTCAAAACAACAGCCCTATTTCAAGGACTGTAACATATATAGTCTGCAGAACTTGAAAAATAACATCGGATGCCTGGCACTTGGCGTGTTCAGTAGACATTTCATTTTATCGTTCTAAGTACAGGCTTATCTGTATATTTTTAACAAATTAAAAGACTATTTTGTGCTGCCCTGTTTGTTGGGGACTTGGGAATCTGTTGGAAGCACTGCATCACATTCAATTATTGCAAGAGCTTTATTTTATATCTACTTGGACCTCAAAGAAGAATTTGTATGAATTTCAAACCCTGAATGGCTGTATATCTTGTTTGTATACCTTGAGTCCATCTAGGCCTTGTACATGCAAGTTTGGGTTTGTGTCCTATTAACAAAAAGAAATCAGTTTATTGCATCTGTTTTAGCCAGCTTAGAGCACGTGACTCATTCCTGGCCGACCGCAGCATTACCCATGAAAATGTTTTCTCTGGGACAACTGGCTCCGCAGTTGCTACCGAGAACACTTCTATGGGGCCCTGAACTATTTATAAAATGTGGCTTCATACACTCACACACAAACTTGGCTTCGGTTTTCTCCCCAGCGACAGCCTTCCGTGTTTGGGATATTAAAGTCCTGCTTTGACTTTCTGGGCTCCAAGATCTCTGTGTAGGAGTAAGTGTAGACGTTGGAATTTTACTTACAAAATTCTGATTTGCATTTTGGATCCTATTAAAGTTATCTCCTGTATTTATGACTCAGA EMBV3_14460 GTTCACCATCCCTGTGACAGACAGAGCCAGGTGGCATCACATAGAGTCATTACTAAATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42501 TAGTGGCCTTCTCCTGCTCATTGCCTCACCTCCACTCACTCCTACACATACTTCTGCTGA Gene GeneID:100297996|LOC100297996:XM_002691551:2_cdna Constitutive 0 NULL GeneID:100297996 11 GENE LOC100297996 NULL similar to olfactory receptor, family 1, subfamily F, member 1 EMBV3_36371 GCTAGCCCACAGAAGCCACAGCTCTCCCTGACTGGAGTTGGTGTCTTTTTAATCCAGAAT Gene GeneID:784353|ATAD3B:NM_001105462:251_cdna Constitutive 1 NULL GeneID:784353 16 GENE ATAD3B ATAD3 ATAD3A ATPase family, AAA domain containing 3B EMBV3_05920 GATCCTCTACCACCAGATAAGACATCCCTTCACCTAGCAGGAAGGCAGACTAGTTATGGC Gene BVT0102_061203 - 0 NULL GK000002.2:129752822-129791370 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112615 1 XLOC_068510 NonCoding TCONS_00112615 XLOC_068510 NonCoding NonCoding - 2:129761354-129763031 - TSS84236 1677 2 TCONS_00112615_6 68 0.341681574239714 1 0 4.86787570926704e-05 0 0 0 0 0 0 0 1.41147242466753e-05 0.000184011138646627 1.36504630099678e-05 2.55863115589651e-05 1.7109625531157e-06 0 0 0.000267738291734538 0 1.49617748273736e-05 4.2760555039268e-06 0 0 4.53559304226626e-05 5.47051347194761e-06 0.000119961584894863 0 0 3.49383342038237e-06 0.000389476586231212 0.000114345464493635 0.000139819652895014 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 9e-106 389 97.00 0.138342277877162 0 noncoding 0 0 0 0 -0.187527060357207 0.260209014550501 0.0088362510719581 0.87899178553707 GTCCACAGTACTGGAGGAAATGCAAGGATGGCTCGAGCGGAGGGTGAAGGGAGGAGAGACGAGGGAACAGGCGGTACTCAGAGTGTATACACCCCCGCACCCAATTTTGGTCAAGGTATCCCAAACTGATAAACACATCCACCAGTTCTTCCCATGGCTGTTGTTTAAAGGGGTGTGAGGCTGGCGCATTTCTCTACCTTGAAGACAAAAAAGATCATCTGAGCACAGAAGCAGAACCAGCCGTGCAGAACTACCCTGTTCAAACCAGCGTGACCGCCCTGCAGCCCTCAAGGAACTCACTCTCTAGAAAAGCAGCTGTGTAACCAAGAATCAGAGACCGCCACCACAGAGACCAGACTGGACGGGCAAATCCACAGGAAGACCACTCCTGGGAACAGAGTTGCCCAAGACAGGCAGATTGATTCAGAGACATTAGATCCTCTACCACCAGATAAGACATCCCTTCACCTAGCAGGAAGGCAGACTAGTTATGGCAAACACAACAAAAACCAAATGGGAATCTTAGTATTGTTAGGAGAAATGAATGTTTTAAATATTTTCTCATTTAAAGGACAGCCTTTTTTATTACTGTCCCCACTTGACAGAAAAAGAAGCTGAGTTTTGGTGAGGCAATGAGAACCACTGGGACTGAAATCCAGGTCTCTGACTATGAAAACAATGCTTTTCCCACTTGAACACAAAAGAGGCTTCACTTCAAAACTGAAACCAGTGAAGAAGGGAGGGGAGGACCCTGTGACGCGGGGAAGAGGGTACGTTCAATTCCACATATTAACATGATGTGCACAGACTACCAAGTGAGCACTCAGACCTCAGGCTTATGGTCCTCAGCCTCCGGTCAGGATAATTCCTAAGAAGCTGGCTATCAGAGTTCCAATCTCTCCCCCTTTTAAGCTCCAGTACCTCCTTCAGCAAACATTCCCCTAATCACCTACAAGAATCACTGTTCCCTCAAGGCAAGTCTTTTTACTCGTTTCTAAGTTCCTCTTTTTACTTCCTGGTTTTAAAGGGGCAAGACACAGACAAATCTCTCTTGGTTTGTATTTGCACCAGACTGGGGGTGGTGTGCCTTGAATAAGTTGATAGCTAAATCAATACTACTTGTGCTTGGAACTGCAAAATAAAGAAACATCACACACTGGAAACAGGGCTTGATTCATTCAAACCCTTACTGAGTTCCTACTCTGTGTGTAGCAGGCAGTGTGCTTGGTGCTGGCCCCCTCAGGTGTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTTTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTAACTCTTCGAGACCCCATGGACTGCAGCCCACCAGGCTCCTCCGGCCATGGGATGCAGACAGCCTCAAAGCTATAAGGAGTCCAGTCTAGTGGGTGCGATGTTATTCAAAAGAAAGATTCCATTCAGTTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGAATTGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCTGGAGTTCACCCAAACTCAGGTCCATCGAGTTGGT TCONS_00106847 . 3' 2054 TCONS_00106847 . 3' 3730 EMBV3_17987 TCCTTCAGCCTCAGTACATCACTGGAGACACAGGACCTCTGACCATCTGATTTCCCAATA Gene GeneID:782132|ZMAT2:NM_001080343:47_cdna Constitutive 1 NULL GeneID:782132 7 GENE ZMAT2 MGC143137 zinc finger, matrin type 2 EMBV3_17154 CCCCAGACCCCCTTTTGCTCTGCATTAGAGAGGCCCCGGTGCTCTCGTCAATCTGGTGTG Variant GeneID:505523|WFDC3:XM_002692483:569_cdna 183^736 2 EMBV3_16864 GeneID:505523 13 GENE WFDC3 NULL WAP four-disulfide core domain 3 EMBV3_14011 CAGACTGGGCAACAGACCTGAAACTAGAGGAACAGCTTATGTGGTGTATCAGGAGATCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17640 CCAAAGGCCTGGATCTGAGAACTGCATCAGGGACTGGTACAAGCGTAATTTTGCCATCAC Variant GeneID:617441|C14orf153:NM_001076459:309_cdna 413^503 2 EMBV3_18394 GeneID:617441 21 GENE C14orf153 NULL hypothetical protein LOC617441 EMBV3_24958 AGTTGGAGAAAGAAGTGGAATATTTTACAGGTACAAAGACGGCCAGGACCACATTGGCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12984 AATATCTGCAGTTCCGATTTCCAGAAAAGACTAAAATGTGACACAGTGGTGAGTGAAATC Variant GeneID:525894|RARS2:NM_001075878:23_cdna 136^238 1 EMBV3_41423 GeneID:525894 9 GENE RARS2 MGC140742 arginyl-tRNA synthetase 2, mitochondrial EMBV3_42650 TGGAGAGGTTGGCTTGCTTCCCTCTCTTCTAACTGCATGTTCAAAAATAAGCTTTTATTG Gene BVV0101_037229 + 0 NULL GK000015.2:43770017-43781462 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061373 TCONS_00061372 1 XLOC_036961 Coding TCONS_00061373 XLOC_036961 Coding Coding IPO7 15:43778367-43825204 = TSS45687 7045 1 TCONS_00061373_5 1038 0.0712562100780696 25 0.850115295926211 7.18215544020947e-05 8.20940109509074e-05 0.00011801810097158 1.7994994463676e-05 0.000120983237576879 1.18514699718354e-05 3.12438884026692e-05 1.95246603168057e-05 4.48791375165412e-05 0.000372950081181495 0.000216856505466341 0.000287518455670142 5.3279150418809e-05 0.000364224029796645 4.67875913046318e-05 0.0112893888002491 0.00608918205724414 0.00743027028363736 0.000139370096056571 0.00017961793465779 5.50082710350137e-06 0.00315558819604351 0.00339584560978322 0.00497991021278287 3.58339048871281e-05 3.49265213169071e-05 5.67958744892965e-05 0.000463947150680309 0.000394600866019313 0.000745028547572048 NM_001192356.1 IPO7 Bos taurus importin 7 (IPO7), mRNA. 0.0 6821 100.00 0.536692689850958 NM_006391.2 IPO7 Homo sapiens importin 7 (IPO7), mRNA. 0.0 8177 89.82 0.861462029808375 TCONS_00061373_5 sp|O95373|IPO7_HUMAN IPO7_HUMAN Importin-7; 0.0 2155 99.90 0.999036608863198 2 coding 0 0 0 0 0.0438798735221004 0.7474350270371 -0.00173655944473017 0.971524568664486 TCCCGCCTCCACGCCGAGGAGAAGAGGTTCTATCCGGGGCCTTGGCGCTTCTCTTTCCTTTCGCGCCGGTTGCCGCTGCGGAGCGCGGCGGGTCCATGTGCGCAGTGAGCGGCACTATTCCTGGCCCAGTAGCACCCGAGCCCCGGGTTTGACCGCGTCCCCGCTGCGATGGACCCCAACACCATTATTGAGGCCCTGCGGGGCACCATGGACCCAGCCCTGCGTGAGGCCGCGGAGCGTCAGCTCAATGAAGCACACAAGTCTCTGAATTTTGTTTCAACGCTGCTTCAGATTACTATGTCGGAACAACTGGATTTACCTGTGAGACAGGCAGGTGTTATCTATTTGAAAAATATGATAACGCAGTATTGGCCTGATCGGGAAACAGCACCAGGGGATATATCCCCTTATACTATTCCTGAAGAAGATCGACATTGTATTCGAGAAAATATTGTAGAAGCCATTATCCACTCTCCTGAGCTCATCAGGGTACAGCTTACTACATGCATTCATCATATCATCAAACATGATTATCCAAGTCGCTGGACTGCTATTGTGGACAAAATTGGCTTTTATCTTCAGTCTGACAACAGTGCATGTTGGCTAGGAATTCTTCTTTGCCTCTATCAGCTTGTGAAAAATTATGAGTATAAGAAACCAGAGGAACGGAGTCCATTGGTAGCAGCAATGCAGCATTTCCTGCCAGTTCTAAAGGACCGTTTTATCCAGCTTCTTTCTGATCAGTCTGATCAATCTGTTCTCATTCAGAAACAAATTTTCAAGATCTTCTATGCTCTTGTTCAGTATACATTACCACTGGAGCTGATAAACCAACAGAATCTGACAGAATGGATAGAAATTTTAAAGACTGTTGTGAACAGGGATGTACCTAATGAAACACTTCAAGTTGAAGAAGATGATAGACCTGAGTTACCATGGTGGAAATGTAAGAAGTGGGCTTTACATATCTTAGCAAGGCTTTTTGAAAGGTATGGAAGTCCTGGCAATGTTTCCAAAGAGTATAATGAATTTGCTGAAGTATTTCTGAAAGCATTTGCTGTTGGTGTCCAACAAGTTTTATTGAAGGTGTTATATCAGTACAAGGAGAAGCAATATATGGCTCCCCGAGTTTTACAACAGACGTTAAATTATATTAATCAAGGAGTTTCCCATGCTCTCACCTGGAAGAATCTGAAGCCTCATATACAAGGCATTATCCAAGATGTTATTTTTCCATTGATGTGCTATACAGATGCTGATGAGGAACTTTGGCAAGAAGACCCTTATGAATATATACGCATGAAGTTTGATGTATTTGAGGATTTCATCTCTCCTACCACCGCTGCCCAGACGCTCTTGTTTACAGCCTGTAGTAAGAGGAAAGAGGTACTACAAAAGACTATGGGATTTTGCTACCAGATTCTCACAGAACCAAATGCTGATCCTCGAAAAAAAGATGGAGCCCTGCATATGATTGGTTCTTTAGCTGAAATACTTCTGAAGAAAAAGATCTACAAAGATCAGATGGAATACATGTTGCAGAACCATGTATTCCCTCTCTTCAGCAGTGAACTAGGCTACATGAGAGCCAGGGCTTGCTGGGTCCTTCACTACTTTTGTGAAGTGAAGTTCAAAAGTGACCAGAACTTGCAAACAGCCCTAGAACTGACCCGAAGATGTCTGATAGATGATAGGGAAATGCCTGTTAAAGTGGAAGCTGCCATTGCACTTCAAGTGCTGATCAGCAATCAAGAGAAAGCTAAAGAATATATCACACCATTCATCAGACCCGTCATGCAGGCTCTTCTTCACATTATAAGAGAAACAGAAAATGATGATCTTACCAATGTAATTCAGAAAATGATCTGCGAGTACAGTGAAGAAGTTACTCCTATTGCAGTAGAAATGACACAGCATTTGGCAATGACTTTTAATCAAGTAATCCAGACTGGGCCAGATGAAGAAGGAAGTGATGATAAAGCAGTTACTGCTATGGGAATCCTGAATACCATCGACACGCTTCTTAGTGTAGTTGAAGATCATAAAGAAATAACCCAGCAGCTTGAAGGAATCTGCTTGCAGGTCATTGGAACTGTTTTACAGCAGCATGTCTTAGAATTCTATGAGGAGATCTTCTCTTTAGCACACAGTTTGACATGTCAACAAGTGTCTCCACAGATGTGGCAGTTACTACCTCTGGTATTTGAGGTTTTTCAGCAAGATGGTTTTGATTACTTTACAGATATGATGCCTCTGCTTCATAATTATGTAACAGTTGATACAGACACACTTCTATCTGATACCAAGTACCTTGAAATGATATACAGTATGTGCAAAAAGGTTCTTACAGGAGTTGCAGGAGAAGATGCAGAGTGTCATGCAGCAAAATTGCTAGAGGTCATCATTCTGCAGTGCAAAGGGCGTGGCATTGACCAGTGTATTCCCTTATTTGTGGAAGCAGCTTTAGAGAGGCTGACGAGAGAGGTGAAGACAAGTGAACTTCGAACAATGTGCCTGCAAGTTGCCATTGCAGCTTTGTATTACAATCCACACCTACTTCTCAATACCTTAGAAAATCTTCGCTTCCCTAATAATGTTGAACCAGTTACAAATCATTTTATTACACAATGGCTTAATGATGTTGATTGTTTCTTGGGGCTTCACGACAGAAAGATGTGTGTTCTGGGCCTGTGTGCTCTTATTGATATGGAACAAATACCACAAGTTTTAAATCAGGTTTCTGGACAGATTTTGCCAGCTTTTATTCTTTTATTTAATGGATTAAAAAGAGCTTATGCCTGCCATGCAGAACACGAGAATGACAGTGACGATGACGATGAAGCTGAAGATGATGATGAAACGGAGGAACTGGGCAGTGATGAAGATGATATTGATGAAGATGGACAAGAATATTTAGAGATTCTGGCTAAGCAGGCGGGTGAAGATGGAGATGAGGAAGATTGGGAAGAAGATGATGCTGAAGAAACTGCCCTGGAAGGCTATTCTACAATCATTGATGATGAAGATAACCCTGTTGATGAGTATCAGATATTTAAAGCTATATTTCAGACTATACAAAATCGTAATCCTGTGTGGTATCAGGCTCTGACTCATGGTCTTAATGAAGAACAAAGAAAACAGTTACAAGATATAGCGACTCTAGCTGATCAAAGAAGAGCAGCCCATGAATCCAAAATGATTGAGAAACATGGAGGATACAAATTCAGTGCTCCAGTCGTGCCAAGTTCTTTCAATTTTGGAGGCCCGGCACCAGGGATGAATTGAGTTACCACTTTCCTTCCTGCAGTGTGATTGTAGTGAAGAGCTTGTGTTCCTCCTAGTAGCGGTTCCAGAACTGGTTCATGTTATCTACTCTAAACTAATTGATCAATAGATGGACAAAGAAACCCCAGAAGGTGGGACTTGATCATGCAACTTGGCACTGAAAATGAAACTAGAGGGATTTTGGCCGGGGAGGGAGGTAACTTGGGGGGTAGGGAGTATTTTCTTTATTTTTTGAAGAAAGTAAGGATTTGACTGAAAGTTCAAGTGACACTGTGGAAATCTGCAACAGGAGGGGATGTCATGAAGGCAGCTTTTCTTTTTCTGAGGAAAAAAATAGGCATGGGCTACAGGACTATTTAAAATGTCTCATTTACAGTATAAGCTCAAAGGTAGATGTAATTTTTACACCTATGAGTATTTGTCCAATTTCTGTCTCTCCTTCACCATTGGGTATCTATTCTTTATATGTAAATAAGATAAGGTAATGGATAGCCTTATTCAATCTTCATCATTTTCATTCATCAAAGATTGTTCCTATGTAGATTATTGGACATTTATTGTAGCACTACATAACTGATTAAAAAAAAATCTGTAAATGAATTAGCACTTTCATATTGAAACAAGCCTGCTAGCCTATGTATAAAATAGCAAAATGTTTGCTGTTTATAAAAAGATGGGATGTAATGGGGTGGGGGGCAGGGGTAATTTCAAGTTATTAATTTAAAAATGAATTAGCAATTTTGTACCTGGTGACTTTGTGGTGCACTCACCTCTGATAGTGACTTGAATTCGGTATGTTAAAAGGGGTTAGTGATATTTCATTGCTGCTAAAAATGGCAACTCCCTCTGTGTCCTGTTTTTTTCTTAAAGCTCTCAGTGTACAAGTGGATATTTGGGTACAAGACCTTACTGTAACAAAGAGGAAAGGTGATATTTGAAGCATGTAAATTGGATATAAAGTTCTACTCTTAAAGAGTTGATCAAAGAGTATGACTAAACATCTATATATGCAATCTATTAAAAGAACTTAATTCGGCTCTTATGTCTTGATTTGATTGCAGTTTTTTTCTAATTATAATTTTTTTCCTCATTGATCTATTTTTATCCTATAACTAGAAAGAATAGGAAATGCACACTTTTAAAATTGACATTAACACCTGCCCACCTCCCTTTCCCATCTCCTCTGCCCCTCTTGTTGATGCTGGTATCTGATAGGCTGAAGGCACAGGGTTCCCTCCAAAAACCACTGTTGATACCACTGCAAAAACAAGCCAGCAACAAGACAACATGGAGAGGTTGGCTTGCTTCCCTCTCTTCTAACTGCATGTTCAAAAATAAGCTTTTATTGATCTTGAACATCTGTCAGATGAGTCATACGTTGGGTTATTTTTTTATATACATGTATACACACAATATTTCAAATTGAAAGCAACATCTCAATGGATTCAAAACTATTGAGTGCTGTTGTCTATAACAGACTAGAAAATTTGTAAATGTAAAAATGAAACAAATGCACATATTATTTAAAATGCATAATGAAAACCCATTGGTGTTGTGTTTTTCTTGTATGCCAGTAATTAAGCCACTACTGTTGGCATTGTTTGGTTTTCTATTTTAACACTGAAGGAGTGAAAGTATTTCCTATATTTATGAATTTACTATGAAAATCTTGGCAAAAAAAGAAAAAAATGTTTATCTGAAATGTGTGGGTGAAAATTGTTAATCAAGTGTGTTTCTACTTTTTCGCCCCAAGTTGAACACCATCTGTAAACCCTAGGTTGCTTCAGGGGATTTCATTATTACATAAAAGTCATAAAATTAAAATGGGGTAGTTGTATATATGCAACATTATGTACAGAGGGGAAGTGCTGAATAGTATTAAACATTTTTGTCTTCCTTTACCTTTTATCTCCTACCTAATATCTAGTCTACTTTTTTAAATTTCAAATTTCACTGCTCTTTGAATTGATAATTTCAATTTTCACATTGTTACTGGAAACCATATTAATAAAGGTTTTAGTTATTTCCATGCACAGTATGAAAATTCTCGGTTGCTGAGATTTTGTTTCAAGAAAATGTATTGGCATGTCTTTGAGATCAAGTTTTATTGTCTCCTCTGTCATACAATCCAAACTAATCTACATTTATGAATTTTTGACTGAAATGAAAGACCTTAAAATTAAACTATATTTAATATTAAATATTGTTCAAATGGTAGTTTCTAATGCATCAAATATACCTCGATTATTTTCAGTATTTCCTTAAATATAACATCAAATTAGAGTTTCTTATAGATTATGAATCTTGATAATGTATCAGTGTTTTTAAATAAGGTTATAGGACTTTTAGATAACTTTTTGAGAGTAGTATTTATAAACTTGTAATTAGTTGCATGTGGATTTTATTTATTTCTTTAACATACAGCATTTCCCACAGTTTCACTAATCTATAACTTATTTTTTAATTTATACAAGTTAATTCTGATTTTGTTTGGGTTTCAGTATGTCTTTTTTAATGGCTGACATTAGCATAAAATCTTCACTTTTTTGTAAACCTAAGCCATCCATTTTTATAAAAGCTATTCGTTTATCAGTATTAAATAAAAGATGTTAATCTATTTCTCTGCAGGTAACAGAATGGTGATTACTAATCTACATGCCTTACCAGGATAATGACTGCTATGTTCACCTCTTGAAGAGACCAGAGTGTAGAGCAGGGGTGGCCATACCACAGCGCTGTGGCTATGTTCAGTTCCAGATATAGTCCCTGAAGCAAGCATTTAGAAAAAGTTATTAGGGATTATATTAATATACACCATGTCTTTGGGAGGATTTAGCACAATGGCTTAAGCATAGTAGGCATTCCATAAGTGCTTGTGAAATAAATGACCTAAACTTACATTAAAACATTGGTTATAAAAATGTCAGTTCTGTTCTATGTAATTTTAAGTTTTGGTGAATGTTGATCCCTTCTGAAGTTGAGGTTTTACCGTTGATGAGGTTGGCCACCCTTGCAGTAATAGCATTTTACTTCGGTGCCTGTGGTTTTTACAAACGGAAACTAGATATAATAGAAATCCAGAATTTTGTTACTATGAGAGGAATATCTTTTAAGTAACTTTTTGAGAGGTAATTCCCCCTTTAGTTTTTTTTTAGAGCACGGGTGATAGGTAGAAATTTGTCAGTTATATTTGGTATCTGAATCCTATATTTAAGTGCTTCCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTTGTGTCCGACTCTGTGCTTCCTACCAGAGTCTTTTTTAAAATTTCCTTTTAACATCCTTTTAATAAACTCAAAAAGGAATTTCCTCAATCTGAAAGAAAGGCTCAAACTAATGGACTTAATAATGAGAGTAAAAACCCTTCCCCCTAAGATCAAAAATGCTCCTGTTGCCCCTTCTGTTTAGCGTTGTACATAGGGTTTTGTTTATTGTTGTTCCATTGCTACTGTGTCCGACTCTGGCCCCATGATCTGCAGAACGCTAGGCTCCTCTCTGTCCTCCACTCTCTCCCCGAGTTGGCTCAAATTCATGTCTGTTGAGTCAGTGATGCTATCTAACTATTTCGTCCTCTCCTTTGCCTTCAATCTTTCAATAAGGGTTTAGCCAGGGCAGTTAGGGAGGAAGAAATAAGACATCCAGTGGGAAAGGAAGAAGTAAAATGTATTCTCAGATGACTGATGTCACAGAAAACCCCGAAGAATCCACACACAAAGAGCTAATGACTTCAAGTTT EMBV3_00488 GATCTCTGGGGAGAAAATCACACAGGGGCTGGGAGGTGAAAGGTCGAATGCTTCCTGAAA Gene BVT0102_334455 + 0 NULL GK000011.2:101838119-101977233 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19976 ATGTCATCTACTATGTGAATGGCACTTACCGCCTGCTGGAGTTTCTCGTGGCCCTGTGCG Gene GeneID:534282|RNF145:NM_001102168:25_cdna UTR3_Alt 2 NULL GeneID:534282 7 GENE RNF145 NULL ring finger protein 145 EMBV3_04552 GAGGAGAACGACGTGGTGGAGAAGCTGAACCTCTTCCTGGACTTGTTGCAGTCCTACAAA Gene GeneID:614344|SNX8:NM_001046533:290_cdna Constitutive 1 NULL GeneID:614344 25 GENE SNX8 MGC137391 sorting nexin 8 EMBV3_27645 GTAGGGATGTGCCCTAACTTTGCAGACTGCTGTTCCTGTTTTCTCAAGTTTAGACCTTTG Gene GeneID:540159|ANKLE2:XM_002694448:39_cdna UTR3_Alt 2 NULL GeneID:540159 17 GENE ANKLE2 NULL ankyrin repeat and LEM domain containing 2 EMBV3_24203 TTAAAGAGAAGAAATTGGTATTTATTTTTCTATAATAGCCATATTTATATATTTATGCAC Gene GeneID:512018|BOC:XM_002684774:291_cdna Constitutive 2 NULL GeneID:512018 1 GENE BOC NULL Boc homolog (mouse) EMBV3_24589 GTTCTCGCCGGAACCGGAAGTTCTGTAATCTTCATGGAATCTCAGTTTACCCTTCTGAGA Gene GeneID:100294848|LOC100294848:XM_002691604:177_cdna Constitutive 0 NULL GeneID:100294848 11 GENE LOC100294848 NULL hypothetical protein LOC100294848 EMBV3_34986 TCCTGCAGACCGAGGACAGCTGGGTGCCTACCTCAGCCTAGAAGAAGGGCTCGAGATACC Variant GeneID:512203|C8H9orf23:NM_001046111:19_cdna 399^556 3 EMBV3_08812 GeneID:512203 8 GENE C8H9orf23 C9orf23 MGC137146 alba-like protein C9orf23 homolog EMBV3_18584 GCCCCTTCCTGCCAGAATTGTTGTCAGAAGGTAAGACTGCCGCAGCCGTGATCGGAGGAG Variant GeneID:514011|LOC514011:NM_001100361:235_cdna 256^408 1 EMBV3_20369 GeneID:514011 21 GENE LOC514011 NULL similar to putative ISG12(b) protein EMBV3_25157 AAATTCCACCCACAGAGTCAGGTTGGGGAGGTGGAGGGCTTAAATTTGTGAGGAAGGCTG Gene BVT0102_281718 + 0 NULL GK000016.2:42912740-43027922 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069248 TCONS_00069251 TCONS_00069249 TCONS_00069247 TCONS_00069250 1 XLOC_041899 Coding TCONS_00069249 XLOC_041899 Coding Coding PTCHD2 16:43027032-43085172 j TSS51666 5307 1 TCONS_00069249_7 1393 0.021104201997362 21 0.909079963535665 0.00081378598904725 0.000233559497624374 0.000730918850550797 0.000455629170798262 0.000711969294091529 4.51365321924918e-05 1.42884423470962e-08 0.000109485279140426 2.66998578329428e-08 4.81091381847192e-05 2.58802258639892e-13 1.30066639195839e-37 1.39692795528121e-10 6.84745841299804e-17 9.69176822095866e-06 0.000143519941662937 1.13663057603841e-21 0.000106127090313637 4.74811701142144e-05 0.000645669697350169 3.74370900287798e-07 4.88997737135017e-27 0.000440809718183393 2.02321649978482e-10 0.000588628672641282 0.000209204584011425 0.000152763184054767 2.74894086629235e-05 1.95411584955438e-08 8.98938352970153e-05 XM_005216984.1 PTCHD2 PREDICTED: Bos taurus patched domain containing 2 (PTCHD2), 0.0 9571 100.00 0.999811569625024 NM_020780.1 PTCHD2 Homo sapiens patched domain containing 2 (PTCHD2), mRNA. 0.0 5795 84.82 0.979272658752591 TCONS_00069249_7 sp|Q9P2K9|PTHD2_HUMAN PTHD2_HUMAN Patched domain-containing protein 2; 0.0 2514 91.18 0.999282124910266 3 coding 0 0 1 1 -0.14659976247744 0.320645050190267 0.0262598032075106 0.648767947743575 AAGCTGAGCTCCGGATTGCGCGCTGGGGAATGAGACACACACCCGGCAGTGCACCGTCTGTGCGCTCTGGAGCGGAGCGGGGAACCCTGGTCTCTCGCAGCTCTTAAGAGCTTCTCTCTGCGACTCCCGCGACGGGACAAGTCCGCACGGCAAGGTGGCCGCAGCCCTGGGCCCCTCCGGTGTGTCTCCCTCCCGCGCCCGCGGCTCAACCAGCTCAGCTTGGCCAGCCGAGGCTATGGACTCAGAGGATGACCCCTTGCTGCAAGATGTGTGGCTAGAGGAGGAGCAGGAAGAGGAGGAGGAAACAATGGGTGAGGCCTTTAGGAGGGGCCAGAAGAAGCTGGGGCCCCACGCTGGAGCAGGGAGGCAGTGTTGCTGGCGGCGCTGGACCTTGCCGTCCCGGCCCCCAGCCTCGGGCTTCTGGAGTACCCTGGGCTGGGCCTTCACCAATCCGTGCTGTGCAGGGCTGGTGCTCTTTCTGGGCTGCAGCATTCCCATGGCCTTGTCAGCCTTCATGTTCCTCTACTACCCGCCACTGGACATTGACATCTCCTACAATGCCTTTGAGATCCGCAACCATGAGGCCTCCCAGCGTTTTGATGCCCTCGCGCTGGCGCTCAAATCCCAGTTTGGGTCCTGGGGGCGCAACCGACGCGACCTGGCCGACTTCACTTCTGAGACACTTCAGCGCCTCATCACAGAGCAGTTGCAGCAGCTACATCTAGGGAACCGCTCGCGGCCGGCCGCCCGCGGCCCACACACGGTGGTCGCTGTAGCTACACAGAACGGCTTGTTGTGGGACACCGCCACCGCCCAGAAGCCAACAGCCAATCGAAGCGGGCGTCTAAGGCGAGAGGCTCCACCCCTGGAGAGGCCGGCAGCCAACCAGAGTGAAGCCCCGATAAACCTGGGGCCAGACAAGAGTGGGCGACGTCCACCCAGTTCCCCGCCCCCCACAGCAGCCACGGCCAATCAGAGCCGTGCCCGCCGTGGCGCCTCGCGCTGGGACTACTCACGCTCCTTTGTGAGCACCAACACCCAGACGCATGCGCACTGGCGCATCGAGCTCATCTTCCTGGCACGTGGCGACGCCGAGCGCAACATTTTCACGAGTGAGCGGCTGGTCACAATCCACGAGATTGAGCGCAAGATCATGGATCACCCGGGCTTCCGGGAGTTCTGCTGGAAGCCCCATGAAGTGCTCAAGGACCTGCCGCTCGGCTCCTACTCTTACTGCTCCCCGCCCAGCTCACTCATGACCTACTTCTTCCCCACTGAGAGGGGTGGCAAGATTTACTATGATGGCATGGGCCAGGACCTGGCCGACATCCGGGGCTCCCTAGAGCTGGCCATGACTCACCCAGAGTTCTACTGGTACGTGGACGAGGGCCTCTCCGCAGAAAACCTCAAGAGCTCCCTCCTACGCAGCGAGATCCTCTTTGGAGCACCCCTGCCCAACTACTACTCTGTGGACGATCGCTGGGAGGAGCAGCGGGCTAAGTTTCAGAGCTTTGTGGTCACCTATGTGGCCATGCTGGCCAAGCAGTCCACTAGCAAAGTCCAGGTCCTGTATGGGGGCACAGACCTGTTTGATTATGAGGTTCGCAGAACCTTCAACAACGACATGCTCCTGGCCTTCATCAGCAGCAGCTGTATCGCTGCCCTCGTCTACATTCTCACCTCCTGCTCAGTGTTCCTGTCCTTCTTCGGGATTGCCAGCATTGGCCTCAGTTGCCTGGTGGCGCTCTTCCTGTACCACGTGGTCTTCGGTATCCAGTACTTGGGCATCCTCAATGGGGTGGCTGCCTTTGTGATAGTGGGCATCGGCGTGGACGACGTCTTTGTGTTCATCAACACCTACCGCCAGGCCACCCACCTGGAAGACCCTCAACTGCGGATGATTCACACCATCCAGACGGCAGGCAAGGCCACCTTCTTCACCTCGCTGACCACGGCCGCCGCCTATGCGGCTAACGTCTTCTCCCAGATCCCAGCTGTCCACGACTTCGGCCTGTTCATGTCTCTGATCGTGTCCTGCTGCTGGCTGGCAGTGCTCTTCACCATGCCTGCAGCCCTGGGCATCTGGAGCCTTTACATGGCACCGCTGGAGAGTGCCTGCCAGGCCAGCTGCAACCAGAAGTGTGGCCGTAGGAGTTCCCCGCACTTCCCTGGGGACGTGTTCACAGCTCCTGAGCGGGTTGGGGGTGGCCCTGCACAGGGCCCCATGCCCTACCTGGACGATGACATCCCCCTGCTGAGTGTGGAGGAGGAGCCAGTGTCGCTGGAGCTGGGAGATGTGTCCCTGGTGTCTGTGCCCCCCGAGGGCTTGCAGCCGGCTCCCAACGGGGGCAGCCGGGGGCAGCTCATTGCCCAGCTGCAGGAGCTGCTGCACCACTGGGTCCTGTGGTCAGCCGTCAAGAGCCGTTGGGTGATTGTGGGGCTCTTTGTCTCCATCCTTGTCCTGTCCCTGGTGTTCGCCAGCCGGCTCCGCCCCGCCAGCCGGGCCCCGCTGCTCTTCCGGCCCGATACCAACATCCAGGTGCTGCTGGACCTCAAGTACAACCTGAGCGCCGAGGGCATCTCCTGCATCACCTGTTCAGGTCTGTTCCAGGAGAAGCCCCACAGCCTGCAGAACAATATCCGGACGTCCCTGGAGAAGAAGAAGCGGGGTTCTGGGGTGTCCTGGGCCAGCCGGCCTGAGGCCACGCTGCAGGACTCCCCAGGCACCGTGTACGTCTCCAAGGTGAAGAACAAAGGCCGCCCGACTGTCTACAGGTTCTCCCTCAATGCCAGCCTGCCTGCCCCTTGGCAGACCGTGTCCCTTGGGGACGGGGAGGTGCCCTCCTTCCAGGTGTATAGAGCGCCTTTTGGTAACTTCACCAAGAAGCTGACCGCTTGTATGTCTACAGTAGGGCTGCTCCAGGCGGCGAGCCCCTCCCGCAAGTGGATGGTGACGACCTTGGCCTGCGACACCAAACGGGGCTGGAAGCTTGACTTCAGCTTCTACGTGGCCGCCAAGGAGCAGCAGCACACCCGGAAGTTGTATTTTGCCCAGTCCCACAAGCCCCCTTTCCACGGGCGTGTGTGTGTGGCACCTCCCGGCTGCTTGCTCAGCTCCAGCCCCGATGGGCCGACCAAAGGGTTCTTCTACGTGCCCAGCGAGAAAGCACCCAAGGCCCGCCTCTCCGCCACCTTCGGCTTCAACCCCTGCATAAACACGGGCTGTGGGAAGCCAGCAGTGCGGCCACTGGTGGATACAGGGGCCATGGTCTTTGTGGTCTTTGGCATCATCGGCATCAACCGCACACGGCAGGTGGACAACCACGTCATCGGAGACCCGGGCAGCGTCATCTATGACAGCAGCTTTGACCTCTTCAAAGAAATTGGGCACCTGTGTCGCCTCTGCAAGGCCATAGCGGGGAACTCGGAGTTGGTGAAGCCGGGCGGGGCCCAGTGCCTGCCCTCAGGCTACAGCATCTCCTCCTTCCTGCACATGCTGCACCCCGAGTGCAAGGAGCTGCCCGAACCCCACCTGCTCCCGGGGCAGCTGTCACATGGGGCCGTAGGCGTCAAAGACGGCCGCGTGCAGTGGATCTCCATGGCCTTCGAGTCGACCACGTACAAGGGCAAGTCCTCCTTCCAGACCTACTCAGACTACCTCCGCTGGGAGAACTTCCTGCAGCAGCAGCTGAAGACACTCCCTGAGGGCTCAGCCCTGCACCACGGCTTCCAGACCTGCGAGCACTGGAAGCAGATCTTCATGGAGATCATAGGGGTGCAGAGCGCCCTGTATGGCCTGGCCCTGTCCCTGCTCATCTGTGTGGCCGCCGTGGCTGTGTTCACCACCCACGTGCTACTCCTGCTGCCTGTACTCCTTAGCATCTTGGGCATCGTGTGCCTCGTGGTGACCATCATGTACTGGAGCGGCTGGGAGATGGGCGCCGTGGAGGCGATCTCCCTGTCCATTCTTGTCGGCTCCTCCGTGGATTACTGCGTCCATCTGGTTGAGGGCTACCTGTTGGCTGGAGAGAATCTGCCCCCCCACCAGGCTGAGGACGCCCACTCGCAGCGCCAGTGGCGGACGCTGGAGGCCGTGCGGCATGTGGGCGTGGCCATCGTCTCCAGCGCCCTCACCACAGTCATCGCCACGGTGCCCCTCTTCTTCTGCATCATCGCCCCGTTTGCCAAGTTCGGCAAGATCGTCGCCCTCAACACAGGCGTCTCCATCCTCTACACGCTCACGGTCAGCACAGCCCTGCTCGGCATCATGGCACCCGGCTCCTTCACGCGGACCAGGACTTCCTTCCTCAAAGCCCTGGGCGCTGTGCTCCTGGCGGGGGCCCTGGGGCTGGGCGCCTGCCTTCTGCTCCTCCGGAGTGGCTATAAGATCCCCCTGCCCAATGGGACCTCCCTATAGCCCTGGCACTACATCTGGACTTGCACACCTTTGGTCCAGTAGGTGGGGGACGAGATGCTTGTTCTCTGCGCCCAGAGGCACATTGTTCGCAGCTCGGCTACAACTCCTTATGTTCCCAAACGTCTGGGCCAGACGTCACCCACCTGTGTGACCCACACTGCCTTCATCACAGTGCCAGCCCCTGCTGGGTGGTGAAGCTGGCTGCCACTCCCCACTGCTGGACACTGGCAGCTGCCCTGCCTCTCCCTGTTAGGGGAAGAGACCAGCCCTCCTCCTGAACCTGGTTCCCAGGGGAGTCAGGTGATTTTTGCAGGGGGCTTCCCTCTGCAGAATTTCCACATTGCCTCAGTGCTCACAAGAACTTTCTGATGTGGTTGTTACAGGGCCCCCATTCTATGGATGTGAAAACCAAGGCATCAGAAGGCGAAGTAACTGACCTGTAGCTGGGTCAGTGGCACAGCCAGAGTGGCCTCCCTCGGGAACTCTGCAGGAAGAGCACAGAGGGTTCAAGGGCAGGGCCTCACACCCCCTGCCCCCCCCTCCCCAACAGTTTTATGGCGGCCAGTGCTGGGTGGTCCTGTGGCCTCCCTAGGCCTTTAGGTCCTGGCCTGGGAGGACAGAAGGACCAGCCTGGGTTACTGCATGTCCTAACCCCGGCCCCAGACTCAAGGGGCTCTGCTCTCTGGAAAGCCATGGGGCCCCAGCACAGCCTTCCTCACAAATTTAAGCCCTCCACCTCCCCAACCTGACTCTGTGGGTGGAATTTAGGGGAGGGGGCAGCCCCTGGGATGGGGAGCTGGCCGTGCCTGCCTCCTGCTCACAGCAGATGGTTCTTATTAAAGTGAAATGAAACTGCAGACCGCCGCCATTAACACGAGCATTTTAAGCAT EMBV3_28514 AGGAATGGGCTAGGAATGTTGGAGGAACCCAAAGGTCTGAGTGGCTAGAGTGCTACTGGA Gene BVV0102_238852 + 0 NULL GK000004.2:46759188-46858941 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187220 1 XLOC_113268 NonCoding TCONS_00187220 XLOC_113268 NonCoding NonCoding - 4:46803572-46805428 - TSS139588 1856 4 TCONS_00187220_3 50 0.380926724137931 1 0 0.000579121155476213 0.000584715752443684 0.00104955080625577 0.00126620466457928 0.00127951722843207 0.000250548427394861 0.000908062537406729 0.00224351288520517 0.00172171552966082 3.32529123473466e-05 0.000462522469426973 0.000186875907032017 0.000170054573974131 0.00224808281736567 7.4016192699954e-05 0.000256147172433483 0.000787178669084384 0.000648901111693111 0.0013947777148277 0.00125927558929219 0.000850527863001602 0.000191913818230669 8.89724302402295e-05 0.000135490072057828 0.000824996837871351 0.000979380118369559 0.0014426900118456 0.000548571504829486 3.13875277878141e-05 1.94361497386077e-05 XM_005226715.1 RAB30 PREDICTED: Bos taurus RAB30, member RAS oncogene family (RAB30), 3e-11 75.2 79.35 0.0474137931034483 XR_248396.1 LOC101927755 PREDICTED: Homo sapiens uncharacterized LOC101927755 (LOC101927755), misc_RNA. 3e-23 114 81.10 0.0662715517241379 0 noncoding 0 0 0 0 -0.163069742193587 0.224787004999335 0.0448446365902344 0.588033341904905 TGTACTGTTTTTGCAACTTCCTGCAAATCATACTATTTCAAAATAAAAGTTTTAATTTAAAAAAATGTGTTAAAAAAATTTTAGCCAAAAAAGTTTAAAACACAAATGTTCAACCAAAACACAGTATAACAACACAATAAAATGCTACTTGGAAATAGAAAGGAATGAAACACCAATACATGCTATAACATAGATGAACCTTAGAAATATTATGCTAAGAGAAAGCAAGCAGACAGAAGATCATATATTGATGATTCTATTTATATGAAACATCCAGAATAGCTAAGCTTATAGAAACAGAAAACAAATTATTGACTGCTGTGGGCAAGGGAGAATGGGAAGCAACAACTACAGGGTTTCTTTTTTGAGGTGACATAAATGTTCTGGAATTAGATAACAGTTGCACAACTTTGTAAATATATTTTTAAAAAACAATTACATACTTGAAAAACTAAATTTTTAAAAAATAGAATTTTATGGTATGTGAATTATGTTTCAAGAAAAAGTTGCACATGAGGAAAAAAATTCTTTTACTCTTTAAATTAAAAAACTGTATACAGTTGCTCAGGCCCCAAAGCTAAAATCTATCACAAGACATGTGTTTTAGCCAATTCTTAAGGTTTGATTTGTGCTTGAATGACACTGTAGCTCTTCCCTGCTGCCTGTTACTCACAAAGCAGCACAATTAATAATCAGCAAACTAAAATCAGTGACAATCTGACAAGCTAACAATCTCAGTTGAAATATCTTAATCTCATTTCTCACAACTACAAATACTAGCATCCTAAAAAAGGAGCCTACAGGAAGTGGTTCAAGGCATAAAAACTCACAGAACTGAACTGAATTAAAATGAATGAAGTGGCACTTGTACATACAAGCAGATAATGATAGAAGTAGATCATATTGCATCAAGCCAGGCCTATATAGTCATAAAATTCAAGTGTGCCAGTCACTATACTAATACAGTTTAAAATTAGATCTATACTCCCTCTCCCGCTCTGGAAAACAAAGTAAAAACCAAAAACACTGGGCATCTGGAGACCCGAATTTTGGTTCAAACTAAGCTAACTGTGTGACCTTACTCTCTATCGGAGATGTCTGTAAAATGAGGAAAACCTCTGAGGCTACCAGTCTCCTGGAAGTCCCTCCACCATCACTTCTCCCCCCACACCACTTCAAGTCAAGCAAGGCACCAGAGTTCTCCCCTATTACCATGGAAGGCAAGCTCTCAGTGTGTAGTTCTTCTCGCCACCCATAATCCACTCTCCACATTAACAGCCAGTATACTTTTTAATAGGAATCAGATACTGCCACTCCTATCTGTGTGCCTATCAAGGGCCTACAAGGCCAGGCCCTACCCATTTCGACTCCTCCCAAATCACCATCCTCTCCAGTAGCACTCTAGCCACTCAGACCTTTGGGTTCCTCCAACATTCCTAGCCCATTCCTCCCCAGGGCCTTTGCCATACTCCCATCTTCTCTTTATTCTAAATTCTGTTCAAACGCCACCTCCTCAGAGAACTGAGTGTCAGCTCTGGTCTCCGTCTGCCTAGACTGAACTGAATAGCTGGACATGTTGCTTACTCATGCTATGCCTCTGCTTCATCTGTAAAGTGGTGATAACTACAGTGTCTGCCTCACAGGATGATCACCAGGGATAGATACATGAAAATGGAGCCGCAAATTGACTGGCACAGTTTTCAAATGTTATCTATCACTGTACTTAATGCACCCCATCTTCACTTTCTATCTTCACAGCATTATCCGGAATCATCTTGTCATCGGTTCTGAAGCCCCCGGAGAGAGAAATCTTCATAAACTTTGCTTTTCTTGCTCAAAGCTCCACCAATGTATTC TCONS_00183852 . 3' 1342 TCONS_00183852 . 3' 3197 EMBV3_42881 GTACTTCCTAGTACAAAGCCCGGAGGCAAACCTGAAAAGCCCCCAGTGGTTTCACCTCCA Gene BVT0102_164884 + 0 NULL GK000013.2:59912716-59957521 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41063 TACATTGCCTACAGTGATGAAAGTGTCTACGGTCTGTGAAGCTGCTGCCCCTAAAGTGGG Gene GeneID:327715|GABARAP:NM_001034048:36_cdna Constitutive 0 NULL GeneID:327715 19 GENE GABARAP MGC128374 GABA(A) receptor-associated protein EMBV3_09370 CAGAGGGGCCTCAGTTCCTGTCTAGCTGGGCTTTCATGGTACTTCCTCTGTGAATTGTGT Gene GeneID:505708|PRKCD:NM_001077855:88_cdna Constitutive 0 NULL GeneID:505708 22 GENE PRKCD NULL protein kinase C, delta EMBV3_22837 AATCACCCAGCCCCCGCTGCTGTCCATCAGGCTGTACCTTCACTGTCTTAGTGCACACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09764 AACAGGTTTGCTGTTGGTGGACAATTTCAGAGCAGTGGAATCTCAAACACGGCTCCCTCC Gene GeneID:784711|TREML1:XM_002697289:85_cdna Constitutive 0 NULL GeneID:784711 23 GENE TREML1 NULL triggering receptor expressed on myeloid cells-like 1 EMBV3_33894 AGTCAACGGGGCCCCTTCTCTTCTTCCTCGTTTTGGAAATTCTTTCCCCTTCTCATTAAA Gene GeneID:510334|NEURL:XM_002698465:493_cdna Constitutive 0 NULL GeneID:510334 26 GENE NEURL NULL neuralized homolog (Drosophila) EMBV3_07142 GAAGCTCGAAGTTCAGGCCACAGACCGAGAGGAGAATAAACAGATTGCTTTGGGAACCTC Gene GeneID:534799|TOP1:XM_002692463:512_cdna UTR3_Alt 2 NULL GeneID:534799 13 GENE TOP1 NULL topoisomerase (DNA) I EMBV3_26994 GTGCTGCAGGGCAAGTAAAGTCGACAAAAGGGCTCTTCACTAGGATAGGTCCCAGACATG Gene GeneID:100138708|LOC100138708:XM_002695836:230_cdna Constitutive 0 NULL GeneID:100138708 19 GENE LOC100138708 NULL hypothetical protein LOC100138708 EMBV3_35455 AAAGTTTAGAGAAAGCCTGACCAGCTCCCCAGCCAGCTACCGCCTCTGTGCTATTCCTCG Gene GeneID:521656|CYP2J2:NM_001038551:66_cdna Constitutive 0 NULL GeneID:521656 3 GENE CYP2J2 MGC134319 cytochrome P450, family 2, subfamily J, polypeptide 2 EMBV3_33520 CACCAAAGGCAGAAACCAAAAGGAAGAAAGAATTCTACCTCGAATTCTGAGAAAAGGAGA Gene BVV0102_139464 + 0 NULL GK000030.2:70630893-70898137 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28294 CTTGGTCCCGAAGATTTTATGGATGAAGAGATTATCTGTTGGTTTTGAATTGCTAAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08829 CATGGCGAGTTCAGCAGTGAAGTACCTGAGGCATATCCCCCCACGTCCTTGTCCAGGAGC Variant GeneID:404132|APOA1BP:NM_205796:46_cdna 217^325 2 EMBV3_22959 GeneID:404132 3 GENE APOA1BP AIBP apolipoprotein A-I binding protein EMBV3_04944 GGACACACGGTGGTATCTGCTGTCATGTCTGGTCTTCAGAGAGCTTATCTGCTCAGCCAT Gene GeneID:513273|LOC513273:XM_002698180:692_cdna Constitutive 0 NULL GeneID:513273 25 GENE LOC513273 NULL similar to Williams-Beuren syndrome chromosomal region 16 protein (RCC1-like G exchanging factor-like protein) EMBV3_28961 GGTTAACAGTTTATGCTGATCATAGGAAGTTAACTTTTTCTCTTTTTTGACAAGGCTTGC Gene GeneID:615110|ACER3:NM_001102285:59_cdna Constitutive 2 NULL GeneID:615110 15 GENE ACER3 MGC179542 PHCA alkaline ceramidase 3 EMBV3_36096 AGCAGTCAGGCACTGCATGTGTTGTCTAGAGTCTGGGTTGAGACAGTCACCCTGATGGAA Gene BVT0102_003004 + 0 NULL GK000019.2:35546101-35557244 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09695 TCGAGCAGGGTGGTAAGGATGTCTTTGATGCGCCCCAGATGCAGTGTAGAAATGTGCTCA Gene GeneID:506359|AURKAIP1:NM_001075255:64_cdna Constitutive 2 NULL GeneID:506359 16 GENE AURKAIP1 MGC142346 aurora kinase A interacting protein 1 EMBV3_02151 TGGTGCCAAGTGGTAACATGGGAGTATTTGATCCAACAGAAATACACAACCGAGGGCAGC Gene GeneID:508912|CNIH4:NM_001034338:35_cdna Constitutive 1 NULL GeneID:508912 16 GENE CNIH4 MGC127199 cornichon homolog 4 (Drosophila) EMBV3_14344 TCAACCCACGACTCTCGTCTTACCGCCTCAGTGACCTTGGGAAAGGTGTTGAAAGTGATC Variant GeneID:525389|MED27:NM_001040546:130_cdna 506^599 3 EMBV3_03171 GeneID:525389 11 GENE MED27 CRSP8 MGC134262 mediator complex subunit 27 EMBV3_38544 AGGAATGGGCAAGTGGAGGGAGTCACATAAAGGAGCAAGTTTGTGCAGCATGTTCCTCTC Gene GeneID:513742|DAAM1:NM_001081588:106_cdna UTR3_Alt 2 NULL GeneID:513742 10 GENE DAAM1 MGC139910 dishevelled associated activator of morphogenesis 1 EMBV3_35753 GGGTTGACTCTGCGGAGCGTTGCCCTGGCCCTGCTGTCCTGCTCTCATTTCTGGATTAAA Gene GeneID:510596|CHMP6:NM_001075457:72_cdna Constitutive 3 NULL GeneID:510596 19 GENE CHMP6 MGC139458 chromatin modifying protein 6 EMBV3_05859 CAACGTTGGGTAACCATTGTCTCTCTCTAGTTCTGGAACTTCAAGCAGCGCCTGTTAGGG Gene BVT0102_035341 + 0 NULL GK000003.2:16067749-16079926 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175737 1 XLOC_105516 NonCoding TCONS_00175737 XLOC_105516 NonCoding NonCoding - 3:16071998-16072891 - TSS130496 893 1 TCONS_00175737_1 42 0.739081746920493 1 0 0.000274247156944321 0.000618884858584416 0.000497415387225703 0.000441710438077356 9.95175921611057e-05 9.21304186947859e-05 0.00109385329783073 0.000155649821342481 3.53421733914304e-05 0 2.56347839659604e-06 0 0 0 0 0.000709829002861422 0 0.000112389111510893 0.000754833891650968 0.000157035691577274 2.71958005510573e-05 0 0 0 0.000860622257244693 0.000398427579744716 0.000361303607308543 0 0 0 XM_005207587.1 SYNPO2 PREDICTED: Bos taurus synaptopodin 2 (SYNPO2), transcript variant 4e-62 242 86.54 0.228443449048152 0 noncoding CTAGTGGTAAAGAACCTGCCTGCCAATGCAAGAGATGTAACAGATTTGGGTTTGATCCCTGGGTCGAGAAGATCCCCTGGAGGAGGAAATAGCAACCCACAGCAGTATTCTTGCCTGAAGAATCCCATGGACAGAGGAGCCTGGCGGGCTACAGTCCACAGGGTCACAGAGAGTTGGACACGACTGAAGCAACTTAACACGTTCACTTAGATACACATGTAAAAAGCATATCAATTATAAGTGTTCAACTAAATAAAATTTCACATGAACACAGCCTTGTAACTCCCATCCAGATTTTTAAAAAGAGAGAATGTTAGCAATATCCAGAAGTCCCCCACTATATTCCCTGCCAGGCATTATTCCATCTTCTTCAAAAACAGGGGGAAGGAGGAATAGAGAGTGGCCCCCTAACAGGCGCTGCTTGAAGTTCCAGAACTAGAGAGAGGCAATGGTTACCCAACGTTGTGAATGTAGTACATGTCACTCAACTGTACACTTTTAAATGGTTAAAATGGTAAATTGTATGTTATGGGTAATTTCTAACAATTTTTTTTTAATGACCAAAAAAGTAAATACTATTCTGACATAACAACAGAGATTAACTTTGCCTGCTGAATTTTATATAAATAGAATCATAATCTTTTGTATTTTTTTTCAATAGTGAGAATCAAGGGCATTGTTGACTGCAGTTGTAGCTCATCATCTTCATTGCTGTAGAGTGTTCCATTGCATAAATGCACCACTGTTTATCCATTTCACCACGGATAGATATTTGGGTTGTTTTCTATTTCAGACTATTAAAAATAACACCACTCTGAACATTCTTGTTCATGTTTTTAGTATACAAATATATGTTTCCATCTACTTATTAAAAAGGAACACACTGTAAAATA TCONS_00172171 . 5' 4251 TCONS_00172171 . 5' 4251 EMBV3_39548 TCAAGAGGACCAAATCGTCTGTGAGGATGCGGATGACTGCAAGAGTCAAGTGTGTCAGTG Gene GeneID:100125947|LOC100125947:NM_001105510:2_cdna Constitutive 0 NULL GeneID:100125947 2 GENE LOC100125947 MGC152283 hypothetical protein LOC100125947 EMBV3_06210 TGGGAAGAGCAAATTGGCGCTCAGACCTGGGAAGAGCACAAAACGCAGGCCCAACTGAGT Gene BVT0102_098484 + 0 NULL GK000029.2:28050654-28072510 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071418 TCONS_00115865 TCONS_00135686 TCONS_00085967 TCONS_00039226 TCONS_00129783 TCONS_00063181 TCONS_00111497 TCONS_00175855 TCONS_00107179 TCONS_00122479 TCONS_00054161 TCONS_00055871 TCONS_00020157 TCONS_00090421 15 XLOC_043189 XLOC_070034 XLOC_081909 XLOC_052005 XLOC_023044 XLOC_078496 XLOC_037908 XLOC_067397 XLOC_105634 XLOC_063090 XLOC_074034 XLOC_031970 XLOC_033679 XLOC_010835 XLOC_055202 NonCoding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_27426 CAAACCCAGGCCCTGGCAATGAAAGCACTGTCTTAATCACTAGACCTCCAAGGAATTCCA Gene BVV0102_226320 + 0 NULL GK000030.2:105462565-105550796 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21610 CCCTTCATCAAGGAGTACCGGGCCAAGGAGAACGACTTTGACCGGCTGGTGCTGCAGTAT Gene GeneID:338085|COPE:NM_176673:24_cdna Constitutive 3 NULL GeneID:338085 7 GENE COPE MGC133960 coatomer protein complex, subunit epsilon EMBV3_29710 ATTCCAAGATGCTGGACTTTGAGACCTTCCTGCCCATCCTGCAGCACATCTCCCGAAACA Gene GeneID:504201|MYL4:NM_001075149:206_cdna Constitutive 0 NULL GeneID:504201 19 GENE MYL4 MGC140227 myosin, light chain 4, alkali; atrial, embryonic EMBV3_10212 GGACAGGAATCTGCAAACTCTGGAAGATAGTGAAGGACAGAGATGCTTGGTGTGCTGCAG Gene BVV0102_285292 + 0 NULL GK000017.2:6686709-6703059 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076589 TCONS_00076591 TCONS_00076590 1 XLOC_046872 Coding TCONS_00076591 XLOC_046872 Coding Coding RPS3A 17:6700674-6707813 = TSS57480 3318 1 TCONS_00076591_2 264 0.427667269439421 6 0.536004483048473 0.000623332239671289 0.000513940636146516 1.54181113256455e-07 0.000280252851767156 0.000675785459215803 5.24072578167685e-05 2.08613569323405e-05 0.000393151367856419 0.0001553795941844 0.000162050668792031 4.28454523238678e-09 1.33999095337719e-05 4.5659918983714e-06 4.65902724714374e-06 4.75602898556478e-08 0.00360673042783157 0.00278899511234341 0.00327331104680094 0.000160489834029599 0.000331682427715704 3.42833228992912e-09 8.81255532554143e-05 0.000848135083484196 0.0019721734950257 0.00062546568546097 0.000336652847281993 0.000261594472041496 9.44718527460965e-07 0.000110597989954066 0.000372165188145645 XM_005217448.1 RPS3A PREDICTED: Bos taurus ribosomal protein S3A (RPS3A), transcript 0.0 1752 100.00 0.292344786015672 NM_001006.4 RPS3A Homo sapiens ribosomal protein S3A (RPS3A), transcript variant 1, 0.0 1305 91.61 0.276069921639542 TCONS_00076591_2 sp|Q56JV9|RS3A_BOVIN RS3A_BOVIN 40S ribosomal protein S3a; 0.0 545 100.00 0.996212121212121 1 coding 1 1 1 1 -0.0194126089604185 0.885581473461518 0.0266692120828307 0.713329291130165 ATGTCGAAGGTCACGTAGACAGCGCGTCCCGCCCCGCACGCCTAAGTTCTCGCGCGAATTGCATTTCCGCCCTTTTGGCTCTCTGAGCGGCACCATGGCGGTCGGCAAGAATAAGCGCCTTACGAAAGGAGGTAAAAAGGGAGCCAAGAAGAAAGTGGTTGACCCATTTTCTAAAAAAGATTGGTATGATGTGAAAGCACCAGCTATGTTCAACATAAGGAATATTGGGAAAACATTGGTCACGAGAACTCAAGGAACCAAAATCGCGTCTGATGGCCTCAAAGGTCGTGTTTTTGAAGTGAGTCTTGCTGATCTGCAGAATGATGAAGTAGCGTTTAGAAAATTCAAGCTAATTACTGAGGATGTTCAGGGCAAAAACTGCCTGACTAATTTTCATGGTATGGATCTTACCCGTGACAAAATGTGCTCCATGGTCAAAAAGTGGCAGACCATGATCGAAGCTCACGTTGATGTCAAGACTACCGATGGTTACTTGCTTCGTCTGTTCTGTGTGGGTTTTACTAAAAAGCGCAACAATCAGATTCGGAAGACCTCTTACGCCCAGCACCAGCAGGTGCGCCAGATCCGCAAGAAGATGATGGAAATCATGACCCGAGAGGTGCAGACAAATGACTTGAAAGAGGTGGTCAATAAATTGATTCCAGATAGCATTGGAAAAGACATAGAAAAGGCTTGCCAATCTATTTATCCACTCCATGATGTCTTCGTTAGAAAAGTAAAAATGCTGAAGAAGCCCAAATTTGAATTGGGAAAACTCATGGAGCTACATGGTGAAGGTAGTAGTTCTGGAAAAGCTACTGGGGATGAGACAGGTGCTAAAGTTGAACGAGCTGATGGATACGAGCCACCAGTCCAAGAATCGGTTTAAAATGCAGACTCTTAATGGTGACAAATAAAAGATCTTATTTGTGGTATTTTTTCCCTGATCATTCTTTTTAAATAACCTGACAGCTTGTTTAAAATGTTCTGATTTGTGGTGAAGTTTTCTTATCTTTTGTGTATAATTTTATTTAGTTACTAAGTAGCCAAGAAAGAGTAACATCTATTTTAAGCAGGAGTGGTCTGGAAGTATTATAGATGGTGAATAAAAGGAAACCCTTTCTTTACATGGTTGAAGTTTTAAAAGCAAAAGTCAGTCAGTCGTATCTGACTCTTTGGCAAGAATACTGGAGTGGGTTGCCATAGCCTTTAGGGATAATCCCAACCCAGGGACTGAGCCCAGGTCTCCTGCACTGGAGGCAGTCTTTTCCATCTGAACCACCAGGGAAGCCAAGGTGGTTCTCAAATCTCTGAAAGGCTTATTAAAACATTGCATGGCCTTGCTCCCAGAATTTCTGATGTTGTTCTAGGATGAAGTCTGCAGGTTTGCAAATTTTCAGGTGACGCTGGTGACAAGGAACCATACTTTGTGAACCACTGTCCTAAACCACACAATGGAAAGAGCTTATTGCCGTTTAGGTTTTTGTGGGTTTGTCTTTTTAAAATATAAATGCTGTCTTCTGTTCTCTAGAGGTAAATCCCCCCCTGAAAACCGTAATGGTCAAGCTGAAGTTGGCTAGACAAGTAGAGAAGCAGGTTATCGGTCTCCTATTGAGTGGGCATTTGTCTGCCATCCAGTGTTTCCTGGTCACTCGCCCATTCTGTTCTATACCTTCTCCGCTCAAATCTCTAATTTTTCATTCTCAGTTCAGCTGATGGCCTTGCTTCTTGAGAGTAAGAACCTCAGAATTTCCTGTTATTTCCACCCTGCCTCATGTTGGGAAAGACTGAGGGCAAAAGGAGATGGGGTGGCAGCGGGTGAGATAGATACCATCACTGACTCAATGGACAGGAATCTGCAAACTCTGGAAGATAGTGAAGGACAGAGATGCTTGGTGTGCTGCAGTCCGTGGGGTTGCAGAGTCAGACACAGAAGCATCAGATTCTACCCTCTGTTCTTGGCTCCATCAGTTCTCGCCTTTTTCATTATTCCTCTGCCAGTCTCAGCATACAAGCAAGTCCTCTGCCTTTCCAGATCCCTATTCAAGCTCATAGCAAAGCTCGAAAGAGTTAGCCATATTTCTTGCACTTAATTTTACTTTCCTTGAATCTGTTGCAGTTGGGCTTTTTTCTCTTTCACACTTTTTTTTTACACCCCACTCTTAACGGAACCTGTTGCTGTTAGAATTAACAGATGTCATTGTTAAGCCAGTGGTTCATCCTTAGCTTTCATTTTACTTCTGTAACAGTGATAATTGACAGTTGATTTTCTCCTGTGTTTCTTAACTGTATTCTGGAATTGGACCTCAAAAAAGTTTGCCTCCCATGTTGCTAGCTACTTACTATTTGCTAGTTTGTCTCAGGCCTCAGTGTTGGAGGGCCCTAGGCCTTTTATGTTTACCAATATTCTTTCTAAAAACAGTCTTACTCAATTTCTTGGTTTTAAATAAACTGACTCAGAATTTTACTTCTAGTCTGTACCTTTTTTGAACTCCAGGTTTGTCCCTCCAACTCCCAATTTAATGTCAATAGGCATTAACATGTCTAAAATTAGATTCCTGAACAACTTCACCCATCCTATTTTACTTTTTACAATTTATTTTCTAAGTAAAATACTTACTTGGCTGCATCAGGTCTATGGCATACAGGCTCAGTAATTGAGATGCATGGACTTAGTTGCTCCACGGCATGTGGGATCTTAGTTCCCCAACCAGGATCGAACCCAGGTTGCCTGCATTGCACAGAGGATTCTTAACCACTGAAATACCAGGGAAGTCCCCCCATCCTGTTTTAGACAGAAGTACGTCCTCTGGTCATCTTTGATGATTCACAGTTCATTCAAAAGGAATCTGGCAGTCCAGTGGTTAGGCCTCTGCTTTCAGTGCCAAGGATACAAGTTTTTAATAAAGAAGAAACTATGTGGAATCTAACCATTTCTTACTGCCTCCATTTCTGTCACTTTGGAGGAAGTCATTACCAGCCTGTGCTTGGAATTGGTTGTGTTCAGTCTCTCAGTCTTGTCCGACTCTTTTGCAACTCCACAGACTGCAGTACACCAGGCTTCTCTGTTTTTCACCATCTCCTGGAGCTTGCTCAAATTCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTCCTCTGTCATCCCCTCCTGCCTTCAGTCTTGACTAGCATCAGGGTCTTATGAACTGGCTCTTAACATCAGGTGGCCAAAGTATTGGAGCTTCAGCATCAGTCCTAATGAATATTCAGGATTCATTTCCTTTGGGATTGACTGGTTTGATCTCCTTCCAGTCCAAGGGACTCTTAAAGAGTCT EMBV3_02214 CCAGTCTCAGGGAACAAGGGTGTATGTCCAAGCAGCCCCACCACTGCTGATGGAACTATT Gene BVT0102_117278 + 0 NULL GK000007.2:22183821-22195199 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10449 CTGTAGAACCAACCCACCCTCATGGCCTGGAGTTCTTGTTTCGTGACTGTAGGAATGTCT Gene GeneID:522917|RIOK3:NM_001075836:25_cdna UTR3_Alt 5 NULL GeneID:522917 24 GENE RIOK3 MGC138071 RIO kinase 3 (yeast) EMBV3_23809 ACGTTGAAGATCTCCAGCAGCTCCAGAGAGGTGATGTACTTCATGATACTGCAGAACTAC Variant GeneID:540604|TTC21A:XM_002696921:449_cdna 539^661 2 EMBV3_35356 GeneID:540604 22 GENE TTC21A NULL tetratricopeptide repeat domain 21A EMBV3_00691 CAGGGATCGCAAAAAGTCGGGTACAACTTAATGACTGAACACAAAACACGCACCTGTTGG Gene BVT0102_228758 - 1 EMBV3_26432 GK000030.2:55895773-55945392 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26103 TGCCCAGACGCAGCGGGGAGGCTCACCTTCCATGTCCCTGGTGACGGTGCTGAAGTGCAT Gene GeneID:100337485|LOC100337485:XM_002694655:178_cdna Constitutive 0 NULL GeneID:100337485 17 GENE LOC100337485 NULL T-box 1-like EMBV3_20392 TCACGAGGAGCGTTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGAGGATT Gene GeneID:100296786|LOC100296786:XM_002691459:306_cdna Constitutive 0 NULL GeneID:100296786 11 GENE LOC100296786 NULL similar to immediate early response 3 interacting protein 1 EMBV3_12572 GCTGCTGCTTCATGGATTTCCAGAATTCTGAATATATTTTACGACACCCGGCCCAGCTGT Variant GeneID:524246|EPHX4:NM_001075855:153_cdna 389^675 2 EMBV3_08699 GeneID:524246 3 GENE EPHX4 ABHD7 epoxide hydrolase 4 EMBV3_05100 TGAGACCAGTCACAGATCCAGACACCCAGACACACACTTTCCCAGTCTTTTCTCGGGGAA Gene GeneID:520712|C5H22ORF23:NM_001046253:73_cdna Constitutive 1 NULL GeneID:520712 5 GENE C5H22ORF23 MGC133941 chromosome 22 open reading frame 23 ortholog EMBV3_29023 TTACAGGCCAGTCATACGTCTGCCGGTGACCTACAAGCCCACCCTGTGTGTGACTCCTTC Gene GeneID:782628|KRTAP12-2:XM_002685117:31_cdna Constitutive 0 NULL GeneID:782628 1 GENE KRTAP12-2 NULL keratin associated protein 12-2 EMBV3_11075 GTCGGGTTTCTGATCCCCTCGCATTCATTACCTTGGCTTCACCTGGACATCCAGAGGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32943 TCTCCGTCCCTAACCCGGTCTTTGGTAGCCATGAGGCCTTTTGTGAACCCTTTGATGACT Gene GeneID:505543|STAB1:XM_002697020:438_cdna Constitutive 0 NULL GeneID:505543 22 GENE STAB1 NULL stabilin 1 EMBV3_25105 CTGTGACAAAATGGCTAGTCACAGTTTAGCACCTTAGATCAAAATTAGTTTTTAAGGGAT Gene GeneID:615303|UGT2B4:XM_002688321:180_cdna Constitutive 0 NULL GeneID:615303 6 GENE UGT2B4 UGT2B17 UDP glucuronosyltransferase 2 family, polypeptide B4 EMBV3_41690 CTGGAAGTGGAGATGTTAGCTGCCTCCAGAAGTGAGAGACCAGAGACGAGAGCTGGAGAA Gene BVT0102_114859 + 0 NULL GK000026.2:48280436-49122094 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40955 CTGGATGCAGCACGCCTGAAAGACTACGTGAATGCTGACCACGGCCTGTACTGCGACAAG Gene GeneID:515968|GEMIN8:NM_001075731:29_cdna Constitutive 1 NULL GeneID:515968 X GENE GEMIN8 MGC140558 gem (nuclear organelle) associated protein 8 EMBV3_28589 CCACTCGCTGCAACTTTAGAGAAAAGCCTGCACAGCAACAAGGACCCAGCAAGCCAAAAA Gene GeneID:533077|PEX7:NM_001076890:29_cdna UTR3_Alt 3 NULL GeneID:533077 9 GENE PEX7 MGC143449 peroxisomal biogenesis factor 7 EMBV3_23180 CTCTTGCAAACCCTCTCCACTGCCTTGATCCTCTCTGCTTTGGTCACATTCACTGGAAAA Gene BVT0102_400357 + 1 EMBV3_08104 GK000029.2:43936187-43943683 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40079 ATGAAGGAGCTGGAGCGGCAGCAGAAGGAGGTTGAAGAGAGACCAGAGAAAGACTTCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08335 CACCAAACTGCTGTTAAATCATGCTTCGGACAGTCGTGTGCAGCTGAGTGTTCAGTGATG Variant GeneID:100299171|LOC100299171:XM_002694751:499_cdna 408^955 1 EMBV3_41450 GeneID:100299171 18 GENE LOC100299171 NULL similar to DNA replication complex GINS protein PSF2 EMBV3_32633 ACCTTTGTGCATGAGTCCCTGGCCGATGTTAAGGCCGTGTGCTCCCAGAAGAAAGTCACT Gene GeneID:280930|RNASE1:NM_181810:13_cdna Constitutive 0 NULL GeneID:280930 10 GENE RNASE1 SRN ribonuclease, RNase A family, 1 (pancreatic) EMBV3_27920 GGACGTCCGCCGGCGCTTAAGTGATCACTATAATCGAATTCCCGGGGCCGCCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_35998 CAAGTCGAAGCCCCGGTGGGATGACATGAACCTCCTTGTTTCTGGGAAGATCAGTTTCTT Gene BVT0102_058727 - 0 NULL GK000018.2:32888928-33746276 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085946 TCONS_00085962 TCONS_00085960 TCONS_00085963 TCONS_00085966 TCONS_00085940 TCONS_00085945 TCONS_00085965 TCONS_00085942 TCONS_00085958 TCONS_00085964 TCONS_00085959 TCONS_00085961 1 XLOC_052004 Coding TCONS_00085961 XLOC_052004 NonCoding Coding - 18:33703892-33713609 - TSS64058 1399 4 TCONS_00085961_6 54 0.199428162973553 4 0.856422396047756 0.00163964350441386 0.00283697587364707 0.0018508108429488 0.000138782726222882 0.00164957500752667 0.000658308116000562 0.00101830669630857 0.000172008158254915 0.000797274246668893 1.35070685559214e-61 1.64797629981164e-15 1.63844387358971e-09 0.000396852663476085 0.000605279908950548 0.000260610091576752 0 0 0 0.000744112995425094 0.00209593219258772 8.64874859413354e-05 0 0 0 0.00149809186192598 0.000568926473045867 0.000730411349293797 8.85542912053761e-31 1.13582369879731e-30 0 NM_001034664.1 PDZD3 Bos taurus PDZ domain containing 3 (PDZD3), mRNA. 2e-11 75.2 66.57 0.225160829163688 NR_038268.1 LINC00840 Homo sapiens long intergenic non-protein coding RNA 840 (LINC00840), non-coding RNA. 4e-27 127 73.53 0.155110793423874 0 noncoding GATGACTGGCAGCCCAAAGCTCGTTGCCTGGGGAGCCAACCCTGTGATTGGAGAGTTGGAACTTCCAGTCCTGCCCCTGACCTGCTGGGAGGGGAAAAGGGCTGGAGATTGATGTCAGTCACCATGGCCAATGATGTAATCAATCATTCCTGTGTCATGAAGCTTCTACATGAAACAAAAGGCTGGGTTTGGAGAGCTTCTGGTTGGTGAACAGGTGGAGATTCCTGGAGGATGGCTGGCTGGAGAAGGAATGGAAACTCTGTGCTTTGCCCTATGCATCTCTTCCATCTGACTATTCCAGAGTGCTGTCTTTCTGTGATAAAACTGTAATCTAGAGCCCATCAGGAGTATGACAGCAAAGTCGGTGCAGTTCAGGCTTTGACTTCTCCTTTTATCACCAAGATTTTTTGGCAGAACATAGAAGGAATTCCAGCCCACAGGGAGTTGCCCCAGAAATTAGATTCAAGAGACATGTTCAAACCAATCTGCAGCATATAAATTTATATGAAGAAACTGATCTTCCCAGAAACAAGGAGGTTCATGTCATCCCACCAGGGCTTCGACTTGCTGCATTGAATAACCAGGAACTGACTTTCTGGTTATGGCTGGATAAAAGCACTGGGTGATGGATGGGGTCAGGGATGTTTCACAACAGCCACTCAGGAGACCTGGGAACAAAACCAGTCACTTACCGGAGAGGCCGTTCATGGACCAGTTGCTCATGTTCCCAGATCCAGTGACCCTTCTCCTGGATGTTGCTGATTTTTAGAAGAAAAGCCAGTGGGCTCCCAGACAAAGTTAAAAAAGGACACTGAGCTGTGGAGGGGTTTTGGTAGCAGCAATTATTTTTCAAACTGGGAAGATATGAATGATAAAGGGACTGTGTCAGCTGCGGGGCTGTAGATTCCATGCCTTTTCCTAAACACTATGATTCAACCCTCCCACTGGAGTCTGCCTGGTGGGTCACTTCACGCCCAGAGCCATGAAGCTCCACGTGGAACAAGGGGTCTGGAAGGACACATATGGAGATGTTACTAGTGACTGCATTTCAGTCTTGGGGTTACGGGAATATTTTCTTCCCTTGTTTTCCAAATGTCCTTTGATGACTTTGATGAAAAAGAAAAGACTATTTTGTTTTTTTTTTTAACCATAGTAGTCTTGCTGTTTTTTAATGTGCATGTCAAACTGCTTGGATATCATGTGAACTAATTCTGTTAATTCAACATTTTTTATTGTCACACATGAGAAATGGAAATACTGAAATTAATAAAGAAGAATAATTTAAAATTTCCTTTAAAATCATTACTATGTGCTGGATGCTGGTAGGAAAATCTTTCTAATTTAAAACTTTGAGAAACATATTTGTGAACTAAAATAAATAGAATAAATAGAAAGGAAT TCONS_00085969 s 3' 489235 TCONS_00085969 s 3' 480110 EMBV3_42009 CAGTGTGGACTGCATCCCTGTGGTCTTCCATTGTTGCCATGCCTTGGTTGGTCAAAAACA Gene GeneID:541140|KRAS:NM_001110001:46_cdna UTR3_Alt 3 NULL GeneID:541140 5 GENE KRAS KRAS2 p21ras v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog EMBV3_10897 CCCGAAGGGTTCCTTTAGTGTTCTGTGGGGAGTTTGATCACCGGATATCATGGAGTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06543 GGGCGGGGGAATGTCTAAAAAATGCCTTGTCCGGTAGAGATGTAGATGGAGAGGATATGC Gene GeneID:614242|RAB8B:NM_001076317:136_cdna UTR3_Alt 2 NULL GeneID:614242 10 GENE RAB8B NULL RAB8B, member RAS oncogene family EMBV3_43164 CGGCTCTGCGGACAACCTGAAGGCCCTGGAAGAGCTTGAAAGGAATATCACCTACGAAAA Gene GeneID:100336007|LOC100336007:XM_002697786:364_cdna Constitutive 0 NULL GeneID:100336007 24 GENE LOC100336007 NULL serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 12-like EMBV3_39979 CTGGTGATGCCTAATGTGATTGGCCTGTGAATCTCCCCATGTAGAATTTGCCCTTATTGC Gene GeneID:539563|MARK1:XM_002693962:157_cdna Constitutive 2 NULL GeneID:539563 16 GENE MARK1 NULL MAP/microtubule affinity-regulating kinase 1 EMBV3_43787 CTCTTCAGCTTTACATTAGCAAAAGCTCCTCCTGTTCTTGGGCTGGTTCACACCCAGCTC Gene BVT0102_275599 + 0 NULL GK000001.2:151199109-151320006 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24249 CTGCAGCCAGGGATGGCACACTCCAGCCAGCACAACAAAGAAAACTGAGGAGGCAAAAGA Variant GeneID:537386|C25H16orf65:NM_001076094:368_cdna 289^478 3 EMBV3_23501 GeneID:537386 25 GENE C25H16orf65 C16orf65 MGC134002 PDZ domain-containing protein C16orf65 homolog EMBV3_12659 TTTCCAAGAAACCCAGTTCATCGCCGTGACCGCCTACCAGAATGCCGAGATTACTCAGCT Gene GeneID:538933|TBX21:XM_002695918:283_cdna UTR3_Alt 2 NULL GeneID:538933 19 GENE TBX21 NULL T-box 21 EMBV3_13551 AACACGGGGTTCCTGAGAACAGCGCCCCTCTAGTCCACTTTGTGAAGCTGGTTCGAGCAA Gene GeneID:522188|PTPRR:XM_002687177:12_cdna Constitutive 0 NULL GeneID:522188 5 GENE PTPRR PTPRR protein tyrosine phosphatase, receptor type, R EMBV3_12924 TGGGGACTTGCTGCGTTTTGCTGAGGTCACCCTTGGTCATCAGCCTCCTCGCATCTGGAA Gene GeneID:281356|NPPC:NM_174125:19_cdna Constitutive 0 NULL GeneID:281356 2 GENE NPPC NULL natriuretic peptide precursor C EMBV3_29402 TCGGCAAGGGGGGTGCTAAGCGCCATCGCAAAGTCTTGCGGGACAACATTCAGGGTATTA Gene GeneID:617905|LOC617905:XM_002697521:248_cdna Constitutive 0 NULL GeneID:617905 23 GENE LOC617905 NULL similar to Histone H4 replacement CG3379-PC EMBV3_28749 AAATATATTGATCAGAAGTTTGTATTGCAGATTTATTTATGAAACAGAGCATCACAATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37239 ATCATTATGAACTACTCAGTCAAACATCCTGCTCCTTACCCAAATGGGTGGTGAATAAAT Variant GeneID:514624|STARD10:XM_002693438:79_cdna 663^780 1 EMBV3_27858 GeneID:514624 15 GENE STARD10 NULL StAR-related lipid transfer (START) domain containing 10 EMBV3_12158 CATGGAATCACTTATCAAAAAATTGGTCCTTTTGCTGTGCCCTAAGACAGATCTCAACAG Gene BVV0102_398356 + 1 EMBV3_36984 GK000005.2:116897166-116948624 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10718 TTCCAGGAACTTGGTTATGGTTGTCTCAAGGTATACCGGACACTACTTCATAACCACTTT Variant GeneID:507906|TM2D2:NM_001038056:41_cdna 539^654 1 EMBV3_05719 GeneID:507906 27 GENE TM2D2 MGC133974 TM2 domain containing 2 EMBV3_26914 ACCACCCTGGGATGTGGTATTTATTAGTGGTTGAGAACAACGGACTTGGGACTTGGGGGC Gene BVV0102_271151 + 1 EMBV3_05527 GK000005.2:113541201-113553951 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196565 TCONS_00196568 TCONS_00196566 TCONS_00196567 TCONS_00196570 TCONS_00196563 TCONS_00196569 TCONS_00196562 TCONS_00196564 1 XLOC_118378 Coding TCONS_00196567 XLOC_118378 Coding Coding NAGA 5:113552202-113562090 j TSS146245 3324 1 TCONS_00196567_3 293 0.0514440433212996 8 0.664610094062911 1.03519127285799e-14 7.48520889923164e-13 6.21662753429403e-06 3.29722562706809e-13 5.12178693138466e-111 1.08427269930662e-11 2.74819653652303e-05 5.32655723537579e-06 4.55726245523866e-05 8.50676673465338e-05 0.000161141958041161 1.6948811422572e-05 9.49410482282408e-06 0.000102610810758911 3.38782507939935e-06 0.00205014236493312 7.50822813432142e-09 0.00787642617451606 0.000105693537532983 7.26772132378902e-05 7.36251918662074e-78 0.0041451180391775 0.00150309371051058 0.00148904496034757 8.32341837386658e-06 0 0 0.000356555738784825 0.000171990408754007 0.000371396613038256 XM_005207406.1 NAGA PREDICTED: Bos taurus N-acetylgalactosaminidase, alpha- (NAGA), 0.0 4888 100.00 0.814981949458484 NM_000262.2 NAGA Homo sapiens N-acetylgalactosaminidase, alpha- (NAGA), mRNA. 0.0 1122 77.69 0.424187725631769 TCONS_00196567_3 sp|Q58DH9|NAGAB_BOVIN NAGAB_BOVIN Alpha-N-acetylgalactosaminidase; 6e-150 431 91.49 0.798634812286689 1 coding 1 1 1 1 0.0165486704031185 0.912014710448651 0.0804385787311775 0.301395556358534 AGGCGGAGGCTCAGATCGCAGCGGAAGAGTCGTGCTTTTCTAACGTTTCTTAGCTTCCAAATCCCGACATACAGAGGCTGGTAAAAGCAGAGCAGATCTGGTCAGGTCCTGAGACCGCTGAGTCCAGAGCAATGTTGCTGAAGACAGGTGCTAGTCCTGGAGAACGGGCTCCTGCGGAAGCCACCCATGGGCTGGCTGGCCTGGGAACGCTTCCGCTGCAACATCGACTGCAGTGAGGACCCGAAGAACTGCATCAGTGAGCAGCTCTTCATGGAGATGGCTGACCGGCTGGCGCAGGATGGATGGCGGGACCTGGGCTACGTATACCTTAACATCGATGACTGCTGGATTGGTGGACGTGATGCCAAGGGCAACCTGGTGCCGGATCGCAAGCGCTTCCCCCACGGCATTGCCTTCCTGGCTGACTATGTGAACTACACCCTGCTGGCAGACATCTGCAACCTCTGGCGCAACTTCGATGACATCCAGGACTCCTGGAGGAGCGTGCTGTCCGTCTTGGACTGGTTTGTGACCCACCAGGATGTGCTGCAGCCGATAGCCGGCCCAGGGCACTGGAACGACCCAGACATGTTGCTCATCGGGAACTTTGGCCTCAGCTTCGAGCAAGCCCGAGCCCAGATGGCCCTGTGGACGGTGCTGGCGGCCCCCCTGTTCATGTCCACAGACCTGCGTACCATCTCTGCCCAGAACATGGACATCCTGCAGAATCCACTCATGATCAAAATCAACCAGGATCCCTTAGGCATCCAGGGACGCAGGATTCTCAAGGAGAAATCCCACATTGAAGTGTACTTGCGGCCCCTGGCCAGTGAGGCCAGCGCCATCGTCTTCTTCAGCCGCAGGATGGACATGCCTTATCACTACCATTCGTCCCTCGCCCGCCTGAACTTCAGCAGCTCCGTGGTGTATGAGGCCCAGGACGTCTACACGGGTGACATCATCAGTGGCCTCCAGGATAAAACCAACTTCACCGTGATCATCAACCCTTCGGGGGTGGTGATGTGGTACCTGTACCCCATCAGGAAGCTGGAGATACCCCAGCAGTGAGGGGCTGGGGCCAGTGACAGGCTGTGGCGGCACCACTGAGCCTGGACCATGGAGGGTCCGTGTGCTGAGGGCCAGTGCGGTGGGGTTCTCTGCTCTCCAGGCCCGGTTGGCGATCTGACCTCATCAGACTTGGGGTGCAAGCTGAGGGCCAGGTCCCGCTCCCTGCCGGAGCATGAACTCTCCAGGAAACTCGTCCCAGGGAGACTTCCTGTGGCTCTGTGGGCCTCTACCGTGTCTGCACAGCCCCACAGATACTGTTGAACAGCTCGGTCAGCTTCCCCTGTGGGGACAGGCAGGGACACGCATATCTGTCAGGACACGAGCCTTGGACCTTCTGTTTGTTGATTCTGAAATCAGGAATTTTGGGAATTTTTCTTATAATTAGGAGTAGAGCTCTGATCTCTTGTCAGGAACCCCCATGAATTATGCGATTAACTTTCCTGCCCGGAGAAGGCCTTGCAGGCTGACACGGCCTGGGAGTGACCTTGGTTCCTTCGGGTCACCAATAAAGCTGTTCTTTTGTCAAGCAGTTGCAACATGGGCCTGGGGCCATGGTTGGTAGGGACTCTGGGGAGCACGACACGAGGTGCCGGTTTCAGATTTCGCCTCACAGGGAAGACATGTGGCATCGTCCGGCCCCTCACTCCACAATGACTGGCAGATCGCACTTCTGACCATGCCAGGCTTGCCTCCCACCCCAGGCCATCCCTGCTCCGCCCAGCATCGTGGTGGTGACAACACAGAGCGGCTGGCTAGTGATGTCCCAGGCCCTCTCCCCTACCCCGTCCACATGTTACAGGGTCTGCCTGCCATGACCACACTCAGCGGCCCCTCGGCTGCACAGGGAAAGGCCCTGGTCTGCTGAGGGATGCTGCGTCATTGTCTGGGCTGTCTTTCAGGTGCCCTCCCCCTTTCTGACAGGCCCTCGGTCAACGGCGCCCCTGGTTGGAGCAGCCGAGGGCAGTGAGCTCTGCCTTTCCCCCACAGGGGCCACACAGCTTATCCTCTGCCCATCAGTGCTCCCAGCTCCCTGCTGAGCTTCTCCTCTCCTACCTGGGTGAGAGGACTTTCAGCCCCCTCAGCTGTGTCCAAAGGAAGGTCCAGGGGCTCTCTGTGACCTGAAGTATATTTCCTGCTCCTCCTCCTAGGGAAAGGGGTATCCAAAGAATGGCTGGTTCTTGACTCCGGTTCCTCGTTCCCAAGCCCTCTCTTTAGCTAAGGCCTCAGGGCGTCTGTCTTCCACGGTGGCTCTCGTTCCCCTTTGGAAAGGGGCAGCAGAGCAGGTGAGGTAGGTTCTCCTTGTGCTTTGGAGCACACATTGGAGCACCCGGGCCCCAGGCTTTCGTGGTGTCCGCTGTAGGAACTCTTCTGGGGGCTCTCCCATGTTCCCTTCCTCAGGGTTCTAAGGTCCTTATGTTAGAGTGTGGTGGAAAGAACTCTCAAATGTGCGTTTTATAGGGTAATTTAAGATCTCTGGAGTCCAGGGTCATCAGAGGAAGCTCCCTTTTCCCAGTTGATGTCTTGAGGCTGTGGGTCACTCAGGAGGACCCACGCTTACTTAGCCCAGGCCTCTGCCCTCTGAGGTCTGTCAGCTCCAGCTCCAGGTCTTGGTCATAGTGCTGCTCGAGCCAAATGGAACGGTCTGGGCAGGAACACTTCTTTCGCCAGTCCCAGGAAAGAAAGCTTTTCCACCACCCTGGGATGTGGTATTTATTAGTGGTTGAGAACAACGGACTTGGGACTTGGGGCCAGGGATCAGCCTGGATGTGACCAGTTGATTACTGTGCCCTTCCAGACCCAGAGATAGTTTTTACTTGCTGTATAACTTTATCCTGAGGTACCTGATCGGTACTGTAGCTTTAGCCTTTATTCTCTTAACACACGGCGTGCCTGTCTTCTACGACATTGTTTTACTGCCTTTCACCAAAGGCCAGTTTGGAACTCAGTTATTTTTCCCAAGTTCAGCCTTGTTTGGACCCAAGAGTACCCCTTCTGTTTTTTTTAAAAAAACATTTTATTATGGAAATTTTTAAAAATAAAAACTGGTAATTAAACCTTCATGTACCCATCACCCAGATCCAACAGCCATCAACCCCGTGCCATTGTTTTATATCTCTCATCCCACACATACTTTTTTGCATGTGAGCCGGAGTATTGAGAGCAAATCAAAGAAAACTCTAAACACCACTGTGTAGCTCTAACTGATCATAGGGCCTTGAAAAGAATATATATCCTTAATAAAAATTTTAATCTGAT EMBV3_38654 TCACCCACAGTTGTATCCATGACTGGGGAAAGGAAGGTGCAGGCAGAGGATGAAGCTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26065 ACCTTCCCGTGGGTAGATCCGTGGATGAGACACTACGTTTGGTTCAGGCATTCCAGTACA Gene GeneID:281999|PRDX4:NM_174433:8_cdna Constitutive 0 NULL GeneID:281999 X GENE PRDX4 MGC133729 peroxiredoxin 4 EMBV3_32413 CCATCATGATCGATTAGACTGGGATGAACATAGTTCTGCTGGCAGATACGTTTCAAGGCG Gene GeneID:613808|CLK1:NM_001102271:137_cdna Constitutive 3 NULL GeneID:613808 2 GENE CLK1 MGC148790 CDC-like kinase 1 EMBV3_38810 GGGTTTGATGCAGTCACCGGGGAATTCACTGGAATTCCTGAGCAATGGGCACGATTACTC Variant GeneID:534526|PAK3:XM_002699942:108_cdna 541^648 1 EMBV3_33004 GeneID:534526 X GENE PAK3 NULL p21 protein (Cdc42/Rac)-activated kinase 3 EMBV3_17479 GAGTTACCGACCTGGCGCGTCCCACGAACGATATCTGGGAGGCAATTACATTGCTGTCAT Variant GeneID:506058|LRRC67:NM_001075238:13_cdna 129^513 2 EMBV3_36113 GeneID:506058 14 GENE LRRC67 MGC127941 leucine rich repeat containing 67 EMBV3_11020 TCTGAAGCAGCGGCAGGACCGGCAGAGGCTTCATGATGGAGTGATCAGAGACATTGAAAG Gene GeneID:786022|LOC786022:XM_002692132:99_cdna Constitutive 0 NULL GeneID:786022 13 GENE LOC786022 NULL similar to CSRP2BP EMBV3_17096 ATTCGCCCGTCCTTCCGGTTGGAGAGTTCTCCGAGCCATTTGTACATTTCATCACTCAGT Gene GeneID:100295732|MAP2K5:XM_002690479:406_cdna Constitutive 0 NULL GeneID:100295732 10 GENE MAP2K5 NULL mitogen-activated protein kinase kinase 5 EMBV3_14841 AAGATCAAGAGCCACAGGATCTCTTTGCAGCTAGAGGAAGAAGAACAGGAAGACCAATTT Variant GeneID:512029|SNX1:NM_001046107:46_cdna 307^434 1 EMBV3_10741 GeneID:512029 10 GENE SNX1 MGC137095 sorting nexin 1 EMBV3_42873 CTAGCTCCTTGCATAGAGACCTTGATTCTTTTGGATCGACTTTGCTACCTGAAAGAGCAG Gene GeneID:513885|LOC513885:XM_002687192:90_cdna Constitutive 0 NULL GeneID:513885 5 GENE LOC513885 NULL similar to Chromosome 12 open reading frame 26 EMBV3_19739 GAGCTGGCCCTCTGTGACCTGTGTCTAGTGGTTTCATTTCCAGGGGCCGTGTGGGACGAC Variant GeneID:507347|SIRT5:NM_001034295:56_cdna 858^973 2 EMBV3_09227 GeneID:507347 23 GENE SIRT5 MGC128489 sirtuin (silent mating type information regulation 2 homolog) 5 (S. cerevisiae) EMBV3_03064 GTCCCCAAACAGACCCAAAATCAGGGATCTTCCTTATACTCGGAACAACCTAGCTCCCCT Gene GeneID:533461|ANKRD55:NM_001099057:15_cdna Constitutive 0 NULL GeneID:533461 20 GENE ANKRD55 MGC152470 ankyrin repeat domain 55 EMBV3_28370 TTCTGCCATGCCAACAACATCGTGCATCGGGTGGTACCGAGCCCCCGAGCTCCTGTATGG Variant GeneID:510920|CDK20:NM_001098933:20_cdna 640^761 2 EMBV3_40119 GeneID:510920 8 GENE CDK20 CCRK MGC154961 MGC166397 cyclin-dependent kinase 20 EMBV3_02211 GAGCTCATTATTTTCAACCAGGAATTATGTCACAAGTAATTGACCCTCAATCTGTAGACA Gene GeneID:504844|RPA1:NM_001075176:58_cdna Constitutive 0 NULL GeneID:504844 19 GENE RPA1 MGC140011 replication protein A1, 70kDa EMBV3_28942 AACAGTTTTTCCACAGAGACGGCGGGAGGTGAAACTCAGCTTGTAATGCAAGCAATGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41457 ATGGATTCAACTGGTTGTGGGTGTTTGTTGTTTTGAGCTGGGATGGAATAATAAGGCCGC Gene BVV0102_054640 + 0 NULL GK000003.2:19991726-19994997 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33402 CTTGCGAAGTGGTGGCACTCCACAGATGCTGTAATAAGAACAAGATAGAAGAACGGTCAC Gene GeneID:100297656|LOC100297656:XM_002687401:104_cdna Constitutive 0 NULL GeneID:100297656 5 GENE LOC100297656 NULL similar to TAFA5 protein EMBV3_21829 CAGACTATGAGTCCACCGGCAGCAACGCCACTTACCATGGAACTAAAGGAGAGCACACTT Gene GeneID:523661|CTNND2:XM_002696428:41_cdna UTR3_Alt 2 NULL GeneID:523661 20 GENE CTNND2 NULL catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) EMBV3_32517 TTTGGCACTTATCTTTGGGAAAGCACAGGATGCTACATCCACAGTGCCCTTTGCCTCAGC Gene BVV0102_082179 + 0 NULL GK000005.2:110691515-110708929 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34858 GAGAGTGAACAAATTGCTGAACTTGAGTGTGCAATATTACCGAAGGACAAGTACCTGGTC Gene GeneID:100296197|LOC100296197:XM_002707713:302_cdna Constitutive 0 NULL GeneID:100296197 11 GENE LOC100296197 NULL similar to small nuclear ribonucleoprotein polypeptide E EMBV3_16194 CAGAGCCAAAAGGGACCATAAAAGTTACCTGGAACAGCCTCCTTAAACTTAACCTCTTGC Gene GeneID:514870|WDR3:XM_002686097:86_cdna Constitutive 0 NULL GeneID:514870 3 GENE WDR3 NULL WD repeat domain 3 EMBV3_23433 CGTCCACACAGGTGCCAAAAATCGAAACTAATGCATCCGGGAGACTGCGCATAGGTTTTC Gene GeneID:514947|ZNF287:XM_002695815:167_cdna Constitutive 0 NULL GeneID:514947 19 GENE ZNF287 NULL zinc finger protein 287 EMBV3_08069 AAGCAGAAGAGGAAGAGGAGCGCCGAGAGTTTGAAGCGGGGATAGCAGCAGAAAAGAGCT Gene GeneID:540193|CCDC11:XM_002697767:310_cdna Constitutive 0 NULL GeneID:540193 24 GENE CCDC11 NULL coiled-coil domain containing 11 EMBV3_31982 TGCTCCCGCATAGTCACATCTTTGTGTAGTCTCCTCCTGCATGGCTTCGACCAGTCAACT Gene BVV0102_193609 + 1 EMBV3_21049 GK000006.2:61807729-61872552 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39993 AATGTGAGCAGAGGGGTCGTTTCCTCTTCCCCAACCTGGAGACAGCAAGACAAAGGATGT Gene GeneID:540105|FMNL3:XM_002687282:170_cdna Constitutive 0 NULL GeneID:540105 5 GENE FMNL3 NULL formin-like 3 EMBV3_38739 TCAGATAGGCTTTTCCCAGTGATCTGAGTTCTGTACCTCCCTCCTCGTCTGAATCACGGT Gene BVT0102_336991 + 0 NULL GK000010.2:87861268-87879233 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018351 TCONS_00018350 TCONS_00018352 TCONS_00018353 1 XLOC_009228 Coding TCONS_00018352 XLOC_009228 Coding Coding C10H14orf1 10:87908526-87921832 = TSS12360 5368 1 TCONS_00018352_6 244 0.469448584202683 5 0.596918451709884 4.57618071653335e-05 3.35865085581694e-05 6.89256440075958e-05 4.12998392190575e-24 1.77549332288741e-05 5.05094385851911e-08 1.25932149452762e-05 2.1540933141448e-05 1.48635307034846e-05 1.0614978165487e-06 3.42784231129813e-05 3.69491342623115e-07 2.3826308754934e-59 6.6441424087297e-05 0 0.00264512052942396 0.00102928945707069 0.00151166794657058 0.000105598495505165 3.40796217099139e-05 8.31051992990137e-13 0.00115263359999211 0.000146349546483856 0.000122403085829383 6.70146051326728e-05 6.09118642315066e-07 9.68572010979635e-05 0.000222576254954246 0.000110034573563037 0.000491033835632374 XM_005212209.1 C10H14orf1 PREDICTED: Bos taurus chromosome 10 open reading frame, human C14orf1 (C10H14orf1), transcript variant X1, mRNA. 0.0 4212 100.00 0.434798807749627 NM_007176.3 C14orf1 Homo sapiens chromosome 14 open reading frame 1 (C14orf1), mRNA. 0.0 794 80.70 0.157228017883756 TCONS_00018352_6 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 5e-09 57.0 26.53 0.590163934426229 1 coding 0 0 0 0 -1.28824517413293 0.0155380952427079 -0.0400814676115473 0.643542475751511 GTTTGCGGATCGGCAACCGCTGATTGGCAGTAAAGCGGTTCACGCCCCATCGCCTGCTCGAGCATAACCTAAACAGCCAATCAGAACGAGGGCTGATCGCAACAAACCAATGCCGGAGCCGGGCTGAGAGTGGGGGCGGGGACAAGTGGCTCAGGTAGACTCAGGTCTGGAGCTGTGCTAGGGCAGTTCCTTTGCTGCTGCTACTACTGCTGCTGTGCTGAGAGTACTGTCGCCAGGCAAAAAGCCCTCTCAGGTTGGAGGGGAGCCATGAGCCGATTCCTAAACATGTTACGAAGCTGGCTGGTGATGGTATCCATCGTAGCCGCAGGGAACTCACTACAGAGCTTCCGAGACCACACCTTTCTCTATGAAAAGCTCTATACCGGCAAGCCAGACCTGGTGAATGGCCTCCAAGCTCGGACCTATGGAATCTGGACGCTGCTCTCATCAGTGGTTCGCTGCCTCTGCGCCATTGACATTCACAACAAAACGCTCTACTACATCACGCTCTGGACCTTCTTCCTCGCATTGGGGCACTTCCTCTGTGAGTTGTTTGTATTTGGGACCGCGGCTCCCACGATTGGCGTCATGGCACCCCTCATGGTGGCAAGTATCTCAATCCTGGGCATGCTAGTGGGGCTCCGGCACCTAGAAGCAGAACCAGGATCCAGACAGAAGAAGAGAAACTGAGGCCAACATCCCCATGTCCAAGATGTCATCTCCCGCCTTTACTCGCCTCTTCTGTCTCTATGCTCTTCAGTTTCATTTCTGCTCCATCATCCACTTACAGCCTTTCACATTTGGGGTTTTTTTCTTTAATTAAAAATTTTTTAAGATATTACATGCATACAGAAAGTCAGTGCCATTTAAATGTATGTAAAGAATGAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCCTGAACTTCCTGATGTTCATTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCGCTGGATCATGGAAAAAGCAAGAGAGTTCCAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGAGTGTGTGGTTCACAATAAATTGTGGAAAATTCTGAAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAACCTATATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAATTTGTATGCAGAGTACATCATGAGAAACGCTGGGCTGGATGAAGCACAAGCTGGAATCAAAATTGCCAGGAGAAATATTAATAACCTGAGATATGCAGATGACACCACCCTTATGGCAGAAAGTAAAGAACTAAAGAGCCTCTTGATGCAAGTGAAAGAGGAAAGTGAAAAAGTTGGCTTAAGACTCAATATTCAGAAAACTAAGATTATGGCATCTGGTTCCATCACTTCATGGCAAATAGATGGGGAAACAGTGGCTGACTTTATCTTTCTGGGCTCCAAAATCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGATGCTTACTCTTTGGAAGGAAAGTGATGACCAACCTAGGCAGCATATTCAAAAGCAGAGACATTACTTTGTCACCAAAGTACGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTTGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGATATCCAACCAGTCCATCCTAAAGGAGATCAGTCCTGGGTGTTCATTGGAAGGATTGATGTTGAAGCTGAAACTCCAAGACTTTAGCCACCTGATGTGAAGAGCTGACTCATTTGAAAAGACCCGGATGCTGGGAAACATTGGGGGCAGGAGGAGAAGGGGACGACAGGATGAGATGGTTGGATGGCATCACAGACACAACGGACATGGGTTTGAGTGGACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGGTTCATGGGGTCACAAAGAGTTGGACATGACTGAGCAACTGAACTGAACTAAACGGAAAGAAGCATTTTAGAATGACGTACATCTGTCCAAATCAAGGAACTGCCAATATATCTGAAGCCCACTGTGTGCTCTTCCCGCACCCACGTCCTCTTCCAGCACTACTTTTCCAGCCTTCTCCTTTTTTCATTTTATTTCTAACTGTTGACTGGTATGGTTGGAAGATACAAACTGAAACTTCAAGCTGCTACTTTGCCCAGAGCATTGCCACCAAGGACTGCTTTGAGGGGTTGTCCATCCAGGTTGGGTTCCTCTCTGCTGCTTGACCCAAGACTCTGAACCACCTGGGGGACAAGCAGTTCTTTTAAGAAGGGCTGGCCGGCCAGGGAGTGTGGCCCCTGTCCTTGTGCCTACAGGTGGATCAGGGTTGGAAGGGTCTTTAGACCTTCCAGTCAGCTGTATTTGTGTAATGAGACTTGTAATAAATAGAGAAGCCTTCTGCTCTGATCCGTCCTGGTACTTTGGCCTCCTCTAATCCCAGAGTGCCCCTGCCCTCCTCTGAGGCCCAGCAGAGGAAGATCCAAGCTTTCTGCAGATCAAATACACCATAATGAGTAGGACAGCACAAGACCCAGGTAAACCTGGCTGCCTTTAGTCTCTTGTTCATTTCTCATGAAGTCAAATCCTCCTCTATCCCCACCTTCCAAATTCTGAGCACACAACTGAACAGCCAGAACCCTCTCTAGTTTCCTTCGCAAAGAAGAAACAGGTTCTTGAGAAAGCATAATCAGACAACATACAGGAAACAGCTGTATGAGCATGAAAAGAACAGTGGAGCCCAAGGACAAGGCACTGGAGCAGACGGCTGCTGTCCAAATACAGCCCTGAGCACCTCCACAGTGGCTGGACCCTCACACACTGTGTATAGATGTGAGAACCCATTCGCCACTTCAGCGAGTGTTTATTGAACACTTACTCCATGCCAGAGACTTGGGAAGGGAAAATGAATGACCCAGGCAATGTCCCTGGGGTCAAGAAACAGACTGTCAACAAGCCCACACCTGAAAGAAAACCCCAGACAGTGCTAAGATTCTAGAAAACCAGGTACCGTGATTCGGACGAGGAGGGAGGTACAGAACTCAGATCACTGGGAAAAGCCTATCTGAGGAGGTAGGATCTGAGTTGAATCACAGAGGTCATATGTCTTCATATGTGAGGCAGTGTCTAGGGCAGACCTAGCAGCACTTAGTCTGTTCAAGGACTAAGGTCACTAAACTACAGAATGGTGACGTTCCTAAGTGAAAGGGAGGAGTTGGAAAGGGAGCAGGGGGCTTGTGAAGGGCATTCCCAACCAGTTAAGGCTCTTTAGGTGAAAGGAACAAAATCTTCCTTAAACTAGCTGAAGCCATAAAGATAACATTGGCTGACAAAACTGGAAAGAGGATAATAGGCTTCAGGAATGGTTTGATCAGGACTCAGTTGCATTTCTCTGGAGTTCTTTTGACTCTGCCCTCCTGTGTTGGCTTCATTCCCAGGCTGGCTTCGTTCATGGTACCAAAAGCGGTTGTAGCAATTCCAGGCCTCGTGTCCCCACCTAGAAAAAGAGCTCCGTGGTACAAACTATCTTTCCCTTACCAGCTGTTGTAGGAGGCAGTAAGAAAAGCAGTGATCTTACAGAGAGTTAATGTTCGGATGGAGGCCTGCAGGGAGCCCAGATTAGAAAGGAATGAATGAAAGCACAAGACGATATGGGTCTTCTAGGTATGCCTCAAGGAAATGTGATTCCAAATAAATAAAGGCAAGATCCCAGAGGATCTACAGAAATGAAACAGAGTATTTGGCAGCTACTCTGGCTATTAGGGTTCTCAAACAGCCCAGGCTTGGCTCCCGTCCCAGGTGATTTCAAGTGGAATCCTAACGTTGTTTGTCTGCCTAAGGATTGCTGACAGAGAGGGAGCCAGAGTGCCCCAGATGCAGTCAGCTCGCTAGAGAAGAAATGTCCAGGAAAGTGATGACTGCAGCCCATTCCTGTAATGCACATAAGGTGAATGCATTACGAAGGGAAGAGGGACAGAAGGGGAACAATCCAGAACTGCAGAAAACAAAACTGGATTCCGGCCCAGACAGTCTGCTGCACGACTGCTGTGCTTGGAGAACAGACATGCCAGCCACCCTGGGAGTTACAGCCAGAAACCACAGTGGGCTCTTGGCAGCAGGCACACTCGGGTGACGCTGTCCACGCTTGGCAGCAGGCACACTGTCCTCATGTGGATGCTGTGTGGAAAGCAGTCCCAGTCCCGTGTTAGGCACTGAGTTGCGGTCCCCAAATAGCCCAGGTGTAACCTCTGCAGCCTCATCTTAAAAATAACCCACAAGGGGGAAAAGACCTAAACAGACATTTCTCTGAAGAAGACATACAGATGTCTAACCGACACATGAAAATATACTCAACATCACTGATTATTAGAGAAATGCAAATCAAAACCACAATGAGATATTACCTCACACTGGTCAGAATGGCCATCATTAAAATGTCTACAAACAATAAATGCTGGGGAAGGTGTGGAGAAAAGGGAACTCTTGCACTGTTGGTGGGAATGTAAATTGATACAGCCACTATGGAAGATGGTATGGAGATTCCTTAAAAAACTAGGAGTAAAACCACCATATGACCGAGCAATCCCAGTCCTAGGCATATACCATGAGGAAGCCAGGGTTGAAAAAGACACATGTATCCCATTGTTCATTGGAGCACTATTTACAATAGCTAGAATATGGACGCAGCCTAGATGTGCATCAACAGATGAATGGATAAAGAACTGTTACATATACAGAGTGGAATATTACTCAGCCATAAAAAGGAACACATTTGAGTCAGTTCTGATGAGGTAGATGAACATAGAACCTATTGTACAGAGTGAAGTGAGTCAGAAAGAGAAAGAGAAATACTGTATTCTAGTCCACACATATGGAACCTAGAAAAATGGTACTGAAGACTTTATTTACAGGGCGGCAGTGGAGAAGCAGACATAGAGCTTAGGGGCATGGGGAGAGGGGAGGAGCAGGTGAGATGTATGGAAAGAGTAACATGGAAACTTACATTACCATATGTAAAATAGATAGCCAACGAGAATTTGCTATATGGCCCAGGAAACTCAAACAGGGGCTCTGTATCAACCTAGAGGGGTGGGATGGGGCGAGTTTCAAAAGGGATGTGATGTATGTATACCTATGGCTGATTCATGTTGAAGCTTGACAGAAAACAAAATTCTGTAAAGCAATTATCCTTCAATAAAAATAAAAAT EMBV3_43317 CTCTTCTTTGCATTTAAGCCAGCTTCTGTCTCCTGGATGAATTTTAGGGCTGGGGGAAAC Gene GeneID:616348|C10H11ORF46:NM_001078061:51_cdna Constitutive 1 NULL GeneID:616348 10 GENE C10H11ORF46 NULL chromosome 11 open reading frame 46 ortholog EMBV3_35802 GGAGAGGATCCGGGAGGAGGAGTTGCAGAGATCCATTGATGAGATGAAACGGTTGGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41940 GCTGCATGTCCTTGGGCTAGGAATTCTTAGTGATAAGAATTAAGTATGGCTCTCTTGGAG Gene GeneID:507296|STAP1:NM_001077868:26_cdna Constitutive 2 NULL GeneID:507296 6 GENE STAP1 MGC151890 signal transducing adaptor family member 1 EMBV3_34455 AAGAGTCGAATTAGCTCAGGAACAAATACATTGGCCAGTTATATAAAAACACAAGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14163 TCCAGGTGTTGCAGTGGTAAAGAATCCACCTGCCAATGTAGGAGATGCAAGAGATGCAGG Gene GeneID:507236|LOC507236:XR_084646:142_cdna Constitutive 0 NULL GeneID:507236 23 PSEUDO LOC507236 NULL similar to zinc finger protein 311 EMBV3_09657 CCTACCCCATATCCAGAGTTAGACTGAGAGCGACATGAGGAGGTGATCCAGAGAATCTAG Gene GeneID:515372|TMEM139:NM_001143872:664_cdna Constitutive 1 NULL GeneID:515372 4 GENE TMEM139 NULL transmembrane protein 139 EMBV3_21059 CTGCGTGGACTACGGACAGTCAACAATATGTACTTAAAAGTTGCACTATTGCAAAACGGG Gene GeneID:100297344|LOC100297344:XM_002691313:440_cdna Constitutive 0 NULL GeneID:100297344 11 GENE LOC100297344 NULL similar to calmodulin 2 EMBV3_28581 CAAACCTGGCTACTGGATTGGCATCCGCTATGATGAACCACTAGGGAAAAACGATGGCAG Gene GeneID:530447|TBCB:NM_001014939:661_cdna Constitutive 0 NULL GeneID:530447 18 GENE TBCB CKAP1 tubulin folding cofactor B EMBV3_41894 ATGAGGGTTGGAAACATTTCTTCTTTCTCCTCTTTGGAGAATGCATACTTGGTAGCTGCT Gene BVT0102_443598 - 1 EMBV3_14743 GK000030.2:109999568-110055860 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38610 CTTACTGTCCCACCTGTGGGCCTCATTCTGCCAAAGTTGGACCAAGGCTCACCTTTCTAA Gene GeneID:539223|LASS2:NM_001034667:136_cdna Constitutive 2 NULL GeneID:539223 3 GENE LASS2 MGC126981 LAG1 homolog, ceramide synthase 2 EMBV3_02378 CAGATGGACTATGACTTCTCCATACTCTGGTAATGAGGCCGGGCTGTCTGTGCACTCAGA Gene BVT0102_002066 + 1 EMBV3_14266 GK000026.2:20777488-20829319 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27251 GGGCTATCAGTACCTGTTTGACCGAGGTGTTAAGGGGATAGTACAGTCCAGTTCAAGCAG Gene GeneID:539542|HHEX:NM_001105424:207_cdna UTR3_Alt 2 NULL GeneID:539542 26 GENE HHEX NULL hematopoietically expressed homeobox EMBV3_01717 CAGGACAGAAGTATAGAATATGGACAGCGGCAAATGCCCAAGGAAAGTGGAGGCCTGAAG Gene GeneID:519882|SPRED1:XM_002690783:205_cdna UTR3_Alt 2 NULL GeneID:519882 10 GENE SPRED1 NULL sprouty-related, EVH1 domain containing 1 EMBV3_00593 GTGGAGAAGGCCCTGACCTATGAGAAATTCGTCACTTGGACGAAGCTGGATGTGATGGAC Gene GeneID:617406|LOC617406:XM_002697607:94_cdna Constitutive 0 NULL GeneID:617406 23 GENE LOC617406 NULL similar to thrombin inhibitor EMBV3_30025 GGCCAAAAGAAAAACCAACAAGGGGCTGGCTCAGTGTCTCAAGGAATACAAGGAGGCCAT Gene GeneID:513987|TCEAL4:XM_002699844:59_cdna Constitutive 0 NULL GeneID:513987 X GENE TCEAL4 NULL transcription elongation factor A (SII)-like 4 EMBV3_27546 AAGCTGTACATGGTGCCCTGGCCGCTGGTGTTCTTTTCGTGTTTAGTGATGATTGCCTAC Variant GeneID:613446|PLLP:NM_001099123:403_cdna 175^297 1 EMBV3_00706 GeneID:613446 18 GENE PLLP MGC166233 plasma membrane proteolipid (plasmolipin) EMBV3_16390 AAGGGACCTCCTCTTAGCCCTTGGGACTTTGAACATCTGCTCCTCACAGGCGTGTCCTGT Gene GeneID:100138344|LOC100138344:XM_002693547:176_cdna Constitutive 0 NULL GeneID:100138344 15 GENE LOC100138344 NULL similar to LOC399888 protein EMBV3_11148 CCGTGATCAAGAGTAGGGGCCTTAGGGCATGGGGCAGTGGTTCCAGTTTAAGTAGACTCT Gene GeneID:512571|PKM2:XM_002690489:435_cdna Constitutive 0 NULL GeneID:512571 10 GENE PKM2 PKM pyruvate kinase, muscle EMBV3_24952 GCTGTGAATCCAGAGCTCTTCATTAAACCTAAGATGCTGCTGAGGAAGAAGGATGCCGAT Variant GeneID:533179|MGC148355:NM_001081531:26_cdna 269^519 1 EMBV3_41645 GeneID:533179 9 GENE MGC148355 NULL UPF0708 protein C6orf162 homolog EMBV3_36578 GAAACGGTTCCGTAATAGACCTTACCCTGTCCTATGGCGCAAGGTGCATTCTGTTTGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15128 TTCAAGAATGATGCCACAGAAATCATCCCCGAGCTGGGCGAGTACCCCGAGCCTCTGCCA Gene GeneID:282880|SOST:NM_001166514:194_cdna Constitutive 0 NULL GeneID:282880 19 GENE SOST NULL sclerosteosis EMBV3_17720 GAGCCATGGTAGGGGAATGTGGCCTCGAGACGTGTTGAAGAAGGTCTCTCGAGGTCTTTC Gene BVV0102_031466 - 1 EMBV3_00689 GK000020.2:48012749-48874611 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00063808 TCONS_00149038 TCONS_00162571 TCONS_00054133 TCONS_00142473 TCONS_00162568 TCONS_00010832 TCONS_00231771 TCONS_00218950 TCONS_00217533 TCONS_00063805 TCONS_00186556 TCONS_00230831 TCONS_00117596 TCONS_00240372 TCONS_00167122 TCONS_00210949 TCONS_00255144 TCONS_00231774 TCONS_00063807 TCONS_00186493 TCONS_00186490 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00149043 TCONS_00033204 TCONS_00131535 TCONS_00149042 TCONS_00232767 TCONS_00222116 TCONS_00231768 TCONS_00186557 TCONS_00217532 TCONS_00158314 TCONS_00230833 TCONS_00186834 TCONS_00071397 TCONS_00011614 TCONS_00131537 TCONS_00230828 TCONS_00178734 42 XLOC_038534 XLOC_090915 XLOC_099452 XLOC_031942 XLOC_086898 XLOC_099449 XLOC_006383 XLOC_141259 XLOC_132269 XLOC_131531 XLOC_038531 XLOC_112608 XLOC_140321 XLOC_071762 XLOC_147036 XLOC_101958 XLOC_129459 XLOC_158076 XLOC_141262 XLOC_038533 XLOC_112545 XLOC_112542 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_090920 XLOC_019438 XLOC_080240 XLOC_090919 XLOC_142251 XLOC_135425 XLOC_141256 XLOC_112609 XLOC_096768 XLOC_140323 XLOC_112885 XLOC_043168 XLOC_007165 XLOC_080242 XLOC_140318 XLOC_108507 NonCoding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_21887 ATTGCTGCTTCCCCTGTCTCCACATACCAGGGTGCTGTGATTACGCCAGCGATGGACCAT Variant GeneID:784766|RBMS3:XM_002696871:274_cdna 889^939 1 EMBV3_25135 GeneID:784766 22 GENE RBMS3 NULL RNA binding motif, single stranded interacting protein EMBV3_06003 CCAGGAGATTTGGGTAGGAACGGGGTTGATGGCCTACATCGTTTATAAAATCAGGAGTGC Gene GeneID:767909|MP68:NM_001113315:327_cdna Constitutive 0 NULL GeneID:767909 21 GENE MP68 MGC127724 MLQ 6.8 kDa mitochondrial proteolipid EMBV3_23030 CCTAACTGATTTTGGTCCCCAGACTTCTAATCAGCCCATCCCCTCTCCACCGGAGTTTGA Gene BVT0102_290392 + 0 NULL GK000023.2:27309608-27327857 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17079 GTCAGTCAGCTAGGCCTTACAGCATGGGTGGCATGGAAAAACAAGTGTCAAAACCGAGAC Gene GeneID:785803|LOC785803:XM_002687388:75_cdna Constitutive 0 NULL GeneID:785803 5 GENE LOC785803 NULL lysozyme 14D EMBV3_20375 GCGGTATTACTCCTGAGAACTTCGCACCTGCTCCGCCGGCATCATTTTTGATGTTTCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41820 TAACAGATATAGCCGGAATCTGCCTCCTCCCCTGTCACTTATACCCTGTGTGGAAAGAGG Gene GeneID:789631|FIZ1:NM_001101308:205_cdna UTR3_Alt 2 NULL GeneID:789631 18 GENE FIZ1 NULL FLT3-interacting zinc finger 1 EMBV3_40091 GGAAATCTTTGGATATTGTATTGACATAATTGTCACAAAATCTATTTAAGGATTTGGCCC Gene GeneID:508337|MFSD1:NM_001075351:115_cdna Constitutive 0 NULL GeneID:508337 1 GENE MFSD1 MGC139134 major facilitator superfamily domain containing 1 EMBV3_27139 GATGAAGGAGTATGGGGAACAGATCGACCCTTCCACGCACCGCAAGAACTATGTACGTGT Gene GeneID:506534|CNPY2:NM_001075267:950_cdna Constitutive 0 NULL GeneID:506534 5 GENE CNPY2 MGC140496 canopy 2 homolog (zebrafish) EMBV3_07678 AATAATAGTCGGTTCAAATGTCAGGCCAGCTCTGCTGCCTGTGGGGAGACTGGTTGAGCA Gene BVV0102_182939 - 0 NULL GK000013.2:78907461-79263517 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14272 TGGCTGAAAACCTACTAAGGGTCTTCAAGGCAGTGGAGCAGGCTAGCGATCACAAGCAGG Gene GeneID:514685|DPEP1:NM_001034472:237_cdna Constitutive 1 NULL GeneID:514685 18 GENE DPEP1 MGC126924 dipeptidase 1 (renal) EMBV3_09685 TATCTCTCTAAAGCTATCAAAATGTAGTTGGTGTGAGTTTTCAGAAAAAGTTTTTAGGAC Gene GeneID:510522|FGB:NM_001142917:20_cdna Constitutive 3 NULL GeneID:510522 17 GENE FGB NULL fibrinogen beta chain EMBV3_33648 GAGTGTGATAGCTTGTTGCTAGTGGAAGGTGAGTCAGCAAATCAAGGAGAACTCAGAGGG Gene BVV0101_008119 + 0 NULL GK000021.2:38276327-39608366 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121193 TCONS_00121195 TCONS_00121194 1 XLOC_073371 NonCoding TCONS_00121193 XLOC_073371 NonCoding NonCoding - 21:39487227-39561922 - TSS90365 395 2 0.994738533215519 0.000413336511491424 0.000534220599780521 0.000544818751886923 4.20462434479928e-05 0.00136925326327229 9.05579028734925e-06 5.76324071705748e-10 0.000129358311447033 9.84562568427593e-06 0 0 0 3.51882480611138e-05 0 1.24207359179001e-05 0 0 0 0.000203702859090872 0.000124609482173029 0.00036121371621559 0 0 0 8.28921943432441e-05 0.000642119255953239 0.000231477301052629 0 0 0 0 noncoding 0 0 0 0 -0.0404942573123436 0.741990770028456 -0.00292364481205279 0.964991816645768 TCTCAGAGGAAGCCTGATCTCGTGGGATATCGTGAGATTTACCAAGGCTGGCAGGGGAATCCTGGAATGGAGACCTTTGGGTCCTGGGTGTTGGAGGTTGCTGTTCTGGACTTACTCCTGAAAGAGGAAATGAGCTCTGGCCCAAAAGCTATGCCGAGTTGAGATCCACTGAGGTCAGGAATCATGTTCACTGGTGGGTTTGCTGTCCTTTCTGCTCCACAACTTTAGACCTTAAGACAGCCATTGAAATGGAAAGATTGAGTGTGATAGCTTGTTGCTAGTGGAAGGTGAGTCAGCAAATCAAGGAGAACTCAGAGGGATCTTACCAACCAATCAGAAAACCACCGAGAAGTGAACTGAAGATTCTAAGGCGATTGAAGGCGATGGCACCCCAC TCONS_00119369 r 5' 168283 TCONS_00119369 r 5' 93621 EMBV3_15653 CTCATCACTGTTCGGAAACACTCTTCAGGTAGCTCATCTAAGGCCCTCTCCACTTTGTCA Gene GeneID:788764|LOC788764:XM_002690771:545_cdna Constitutive 0 NULL GeneID:788764 10 GENE LOC788764 NULL similar to olfactory receptor 1306 EMBV3_11158 GAGTTCAAGGAGGTGCTGAAGAGCGAGGAGGTCCGGTTTATCACTAAAATATGGCATCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33972 CGAGTCGGTAGGTCTTTGTCAACATGTCAGAAGACTTCATTGGTCCTCTGTTTCCTACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14954 CTGGAGATTTGAGAGAAGCAAAGAGAGTTTATGAGCTGGGCATCTCTGAGGGTTCTACCC Gene GeneID:100139912|MAMLD1:XM_002699644:131_cdna Constitutive 0 NULL GeneID:100139912 X GENE MAMLD1 NULL mastermind-like domain containing 1 EMBV3_25507 CGCTGAGACAGGTGTGGAGGTCCTAGGCAGGGACAATGAAGCCTTTGAGGTGCCAACCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30684 CTGGAGCGGCTGCTGGCGTGGAAACTAGCGCGGTACTGGCTGCTGGAGCTCCTGAGGTGG Variant GeneID:516108|LOC516108:XM_002697903:510_cdna 328^487 2 EMBV3_32044 GeneID:516108 25 GENE LOC516108 NULL similar to CG2446 CG2446-PC EMBV3_15729 TTGTATTTTTCCACAGGACGCAGATTCACCAATTTGGGTTCCAGACAGGCCAGGTTCGCG Gene BVT0102_192430 - 1 EMBV3_35745 GK000002.2:10692823-11210619 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081894 1 XLOC_050771 NonCoding TCONS_00081894 XLOC_050771 NonCoding NonCoding - 17:73322643-73323079 - TSS61834 436 0.791284403669725 1 0 0 0 0 0 0 0 1.33754620188907e-06 0 0 2.74569516406098e-05 4.46948551169467e-06 9.40848518699641e-06 5.06223465669872e-07 0 0 0.00833244244093284 0.000966462445252387 0.00387099392020841 0 0 0 0.00159232419879898 0.00166329548588627 0.00183251182395734 0 0 0 0.000113211160701269 0.000161457112661942 0.00029268630826187 XM_005192833.1 LOC101909757 PREDICTED: Bos taurus uncharacterized LOC101909757 (LOC101909757), 3e-85 318 90.83 0.522935779816514 0 noncoding 0 0 0 0 0.0261587956829462 0.823260886386536 0.00627717193325281 0.904216634535155 GCAGCGAGGAGGGTGCGGGGCGAGGCTGGAGGCGCAGAGGCGAGAGCTGCCTGGTGGGCGGGGCAAGCGAGTGCGCGCCGCGAACCTGGCCTGTCTGGAACCCAAATTGGTGAATCTGCGTCCTGTGGAAAAATACAAGCACATCCTCGACCGCTAGTTAATAATGAGTCAGGACCCTTCCATTGTCCTGAGAGAAGGTCCTTCCATTTGACTAATGGCTTTGCATTCAATTGCTCTGGGCACCAATGGCGAAGCATTGCAGTAGTTCCGGCGGAATCGGCATTTAAAATATTTATTACAAAAAGAGCATGTTGCAAGATTTGATGGGGAGAGCTATACTTAAACTCCCCTTCTTTTAATTTTTGAATTTGAAGCTTTAATGTTTGATGTGCTCTTTCCACAATGGCTTGTCCCCGGGGATTATAAGGGATGCCTG TCONS_00076348 TCONS_00076342 TCONS_00076343 TCONS_00076344 TCONS_00076345 TCONS_00076346 TCONS_00076347 . 5' 1857 TCONS_00076348 TCONS_00076342 TCONS_00076343 TCONS_00076344 TCONS_00076345 TCONS_00076346 TCONS_00076347 . 5' 1857 EMBV3_28662 ACTTTGTGGCGGAGCTCGCCACTGGAGCCAGTACATTACCCGGGCCGTGCCGGCGAGGAT Gene GeneID:539144|FRAT2:XM_002698416:361_cdna Constitutive 0 NULL GeneID:539144 26 GENE FRAT2 NULL frequently rearranged in advanced T-cell lymphomas 2 EMBV3_42026 GACTCCGGCTCCGGGAGAACACGAGTTTTGTCAGTGTGTTTGTCAAAGTGTCTCTGATGA Gene GeneID:529391|SYT15:XM_002698940:29_cdna Constitutive 0 NULL GeneID:529391 28 GENE SYT15 NULL synaptotagmin XV EMBV3_12435 GTTATTTCTGGAGAAGCCCTGGGAATCAAGGACCTGATGATGCACAGCAAAAAATAGAAC Variant GeneID:790878|PIR:NM_001102358:44_cdna 788^917 3 EMBV3_09851 GeneID:790878 X GENE PIR MGC160032 pirin (iron-binding nuclear protein) EMBV3_23353 CAATGCCATGCAGCTTGTGGAATCTTAGTACTCTGACCAGGGATGGAACTCAGGCCCTCA Gene BVV0102_275734 + 1 EMBV3_36829 GK000002.2:107711676-107722664 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00548 AAGGAAATGCTTTCCGTCTTCTCTGCCACTTCGGCCACCTGGAAAGAAACAGCTGAGATC Gene BVV0102_059546 + 0 NULL GK000009.2:61925636-61993720 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235683 TCONS_00235682 1 XLOC_144281 NonCoding TCONS_00235682 XLOC_144281 NonCoding NonCoding - 9:61933402-61950626 - TSS176589 632 2 TCONS_00235682_2 50 3 0.963479068687221 0 0 0 0 0 0 0 0 0 2.3573133799925e-15 8.35128463737814e-06 4.56168639904682e-09 9.48243707372681e-06 0.00100378811877856 1.58503453269284e-05 0 0 0 0 0 0 0 0 0 0 0 0 1.55921995470583e-30 4.90780469269224e-05 3.00827337414638e-11 XR_235866.1 LOC101905895 PREDICTED: Bos taurus uncharacterized LOC101905895 (LOC101905895), 3e-94 349 100.00 0.30379746835443 0 noncoding 0 0 0 0 -0.162153469068542 0.489110720188942 0.0883617112293243 0.306418509205196 GTTCTCATCCTGAGCATTTCACTCCTTTACTTCCCTGACTCTTTAGGCAAAAAAGCTTGATGTTCCTCTAAAAACAGATTGGAGGCAGTGAGGCAAATGGCAATGACTTACCTGTGAGGCACCTGAGGACTTGGACTAAGATAGTTCAAAGGAAATGGAAAGGTAGACATGGAAATAAAAGCCTGAGACCTGGTGACTGAGTGCGGAGACCAGACATGGTGGAGAGGATGAGGAAGAGGAGAGTGTTATGACCAGTTGGTCACATGGGAGACAGGAGATTGAAGCGAAGAGATGCCAGAAGAAAAGACAACAGGATGGATAGGTCTTTTCTTCAGAAGGAAATGCTTTCCGTCTTCTCTGCCACTTCGGCCACCTGGAAAGAAACAGCTGAGATCGATCTGACCTCCTACTACTGAAACATACACCCAGAAAGAGAAGAGAGGGTTAAGAGAAAAACAAGGAAGAAAACGTACAAGGTCATCGTATTTGAAAATCTTATTAAGTAGGTGCTTCTTCCTCTAAAGTGAATATTGAAGGTCTAGATTTCCATCAGGCATAAATCCTTTTAGAAAGATTTTCAGCACTGATTATTTCAATATGAATAAAAGTGAAATATTCAGGATCGTGTACAG TCONS_00237487 r 5' 6418 TCONS_00237487 r 5' 6418 EMBV3_03218 TGCTTCTGTGTGCAGTGGCCGCCGGGGCTCAGCAGAGCTTGTCAGCTTTTCTAGGAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21336 ACCTGTAGTACGCTTGAAGGATATGACCAGTGCCTAATGTTGAGTATAAGTCACTGCGTG Gene BVT0101_025154 + 1 EMBV3_15331 GK000011.2:4618884-4630685 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026755 TCONS_00026753 TCONS_00026754 TCONS_00026752 TCONS_00026749 TCONS_00026756 TCONS_00026751 TCONS_00026750 1 XLOC_015102 Coding TCONS_00026749 XLOC_015102 Coding Coding AFF3 11:4628612-4655114 j TSS19123 4381 1 TCONS_00026749_3 246 0.0287605569504679 8 0.834987358967586 9.90635359825182e-21 0.000634765080779471 3.80676653195414e-32 7.27295363081951e-48 2.06119935358062e-21 5.17498108403843e-05 0.000158426273728626 8.54428358865428e-05 2.61209981866182e-20 0.000472489664166449 1.80378037371278e-05 6.51770126635777e-22 4.06156258821845e-05 3.74608044818492e-26 9.84766516614169e-24 1.3218544073333e-22 3.78936499609999e-06 7.01555330765269e-06 1.03278809202485e-33 5.64898347453676e-05 0.000153899483166418 1.28077036838351e-09 6.7457123167158e-06 7.06213165633496e-06 1.47771423177365e-08 0.000125410820348036 0.000134545789424632 1.77877577854676e-30 3.80172225568577e-05 1.26279823636756e-14 XM_002700703.3 AFF3 PREDICTED: Bos taurus AF4/FMR2 family, member 3 (AFF3), mRNA. 0.0 7746 100.00 0.980141520200867 NM_001025108.1 AFF3 Homo sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 0.0 2030 76.83 0.6108194476147 TCONS_00026749_3 sp|P51826|AFF3_HUMAN AFF3_HUMAN AF4/FMR2 family member 3; 1e-160 481 97.56 0.995934959349594 1 coding 0 0 0 0 0.306695294421507 0.160450034710502 -0.0276853607609557 0.547643495691286 TCTAGGGAGGAGAGAAGGGCTTCTAAAACAGTGCTGAAACATTGACCAGCCAGTGAGGACACCACTCACTGTGGCTGAGGGACTTGGCCACGCAGTGCAGATTATTTTATGCAAGAAGCTAAGCGAATGAAGCATAAAGCAGATGCGATGGTGGAAAAGTTTGGAAAGGCTCTGAACTATGCAGAAGCAGCCTTGTCATTCATTGAGTGTGGAAATGCCATGGAACAGGGCCCCATGGAGTCCAAATCTCCTTACACCATGTATTCAGAGACAGTTGAGCTCATCAGGTATGCCATGAGACTAAAAACCCACTCAGGTCCCAATGCCACACCAGAGGATAAACAGCTGGCTGCATTATGTTACCGATGCCTGGCTCTCCTGTACTGGAGGATGTTTCGACTCAAAAGGGATCACGCTGTAAAGTATTCAAAAGCACTTATCGACTATTTCAAGAATTCATCTAAAGCTGCCCAAGCCCCATCTCCATGGGGGGCCAGTGGAAAGAGCACTGGGACCCCATCCCCCATGTCTCCCAATCCGTCCCCCACCGGCTCCGTGGGCTCTCAGGGGAGCCTGTCCAACAGCAACGCCCTGTCCCCATCCACCATCGTCAGCATCCCGCAGCGCATCCACCAGATGGCGGCCAATCACGTGAGCATCACCAACAGCATTCTCCACAGCTACGACTACTGGGAGATGGCAGACAACCTGGCCAAGGAAAACAGAGAATTCTTCCACGACCTGGACCTGCTCATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAGCAGGGCCTGCACTGGCTGCGAAACAGCGCCCACCTGGCCTAGACACCTGCCCCCGGCTGCGGCGTGCACGCATCTCCACGGATGGCCCAGCGTTTCGGGACACTGTGCTCCCCACGTTCCCGGCCACAGCATTTCTCGAAAGGCGGTGAATAGTTTTCAGCATCGAACAGCAGTCTTTCCTCCCAGGGCATGTGTGTTTGTGTATGTGGGTGCAGAATGAGCTGCCCGTGGAGGTGTGTAAGACACAACAGTTCTCTAGAACACATCTTCTTTGTCTAGTTTCCAGCCTCCCAGGCTAGACAAAGTGATCTGACATTTCTGATTAGAGAAGACACACACTCACACACACACACACACACACACTTTCTAGTTCAAAGCTAAACCGTGACTTCCTAGAATATTCAACCAAAATCTCATGGGTTAGTGAACCAGGTGCAATATCGCACACCAAAAGCTTGACTGCCAGTTAAGATGAACCCAGCTCTTATACTCTTGATTACTTTCAGTATTAATATACTTTTCTCCCATTATTTTTTTATTGTCTGTATTCATGGGTATTTGAATAATGAAAATAAGTCAGTTATTTTTGTGTGGACGTTTACTAGACTGCATGTTACCAAATACCCTGCCTTTTGTCTGGTCCCTCCCCTCCTCCATCCAGTTCTCCATCTAACTCTCCCATCAGCTAAACGTGTTAGACGCAAATGAATCGACTCCCATGGGCCTTCCCTGCCCTGCCCCCCAAAATAGTATGACCATGACCCTGACCCTGAGATTTGGTGGGGGGAAAAAAAAAAACCCTCCATGTCTTTGAAAACTCACCCAAAGGAAGCAGCAGCAGCTGTGTCCCTGGGCTCAGTGAGAAACAACCCTCTGCCCCCACCAGGAGCCCAGCCGGCCCGTGTTTCTTCCTCCCGCCACTGTGACCCCAGGGGCTGTGGAGCCCCATGGGCTTGTCGGCCGATACTTTTCAACAAGCCTTTTCTCTGTCTGAGAGCTTTCTTACCCATGTTCTTGGCCGAATGAGGACATTGTCTAGGGTGTCCCTTCCCTCGGAATCTGTGTCTGTTGCTTTGTCAGGCCAAGAACTCTTTGCTGCCGTGATCCTGTCTAATCCTCCCTGTCTTTGGAGAAAGTGCCGTGCGGACCTTGAATGCATTTTTGACCCGGGGGATGTATTTCAGTGTCTGATGAGCAGGTTGCTCCCCACAGAGCAGGTGATCCTGGTAGTCACTGCAGTTCTGTCTAGGGTAGCAGCGACCTGAACATCATGCTTAGGCCCCCGTGCGTCCGGTACGTGTATGTCTTCCCCCGATTCTTTGTTTTGCTTTTTTTTAATTAAGTTTACATTTTAGTTTTTTCAACATTTTGTTTACAATGTTTGTCTGAAATTTCTTTTATTGTCTGAAATTTATTTCTTTTATTGTCTCTTATCATATCCTAGATTTAGTGTTCTTGTTAAATATATTTGAATACAAAGATATTGGTAAAAAAAAAAAAAGAAAAAGAAAAACTCCTGGAACGGAGGATATACCTTGCCATGCTTTAAAAACAAAAATAATGACCTTGATGCCTCTCACTTGACAAAATTTCCCCAAGACAGCCTGAGAAAGACAGGTGATGGGGTACATGGAATAATCCATTTTTCAAGGTGATGATAACGTAAAACATGTGTATCAGATGCTAATGGTCTCACTGGTTTGGTTGCAGTGTTAACATTTTCGTCAGCCTGATCTGTGGGTGGGAAATCAGATTGCTGTAATTCCCTAGCTCTAAGCCCTGATTCAAAACCGTGCAAGTGATTGAACAGCTTTGGTGATTTGAAATTCATCTCAATGAACAAGTGAAGGCTTGTGAAATTTGCATTTGGTGTTGGCCTTTCAGCAGCTGGAAGTATTAACAATACTTCTTTTTTCACATTTATCCAACTGAGGTGCTTCTGACATGCCTTTCACTAATTATTACTAGATTTCCCCTTCCCATTGGGGTCTAACTTAAGAGATTTTTATTTTATTTTTTTTGGAGGACTGAGGCTGAGTTCTACTCACTGCTGCTGAATTCTGATGAAATGTTCAGACTTTGATGTAAAAGGACAGCCCGCGGTGTCCCTCATGCATCCCTGGGGTGCCTTTCTGATCTTATTCACCTTTAAGCCCCAGGCCTCATGGTGGCGTCCACGCGGTGTGCTCACGAGTCAAGGCACAGGCTGCCTCCAGCTGGCTGTGCCAGCAGCAGTCAGGACGCCGTGAGCCGCAGTCACTTCCTGCAAAGCGTGAAGCCAGTGGACTGGGGGCAGTCACAGCATGCCGTTCCTCTCACGGTCGCATCTCACTGGTGCAGCGTGTTGGGGCAGTGGTTGTTCCTTGCTTTGGCATCAGTGCTTTGGATAAGGAAGCATCTTCTGATCATTGCTGCTTCCTTTTCTTTAGTTTTGTTCAAAGTACAGATAGCTCTCTTGTGTTTTCTGATTATGAAACTAATAGACACTCATGGTGAAAATTCAAACGATGCAGACAAGTGTAAAGTAGGAAGTACTCAGTCCCACCCCCCAGAGACAGCATTGCTCACCCTTCCCTGTATATCCTTCGGGAGAGCCTCCCATTTAAATGTAGAATGTCTATCATCATTTCCTTCTATTTGAAGACATTATTTCTTCAGAAGTTCAGTACAAGTTCAACTGGCCTTATCCCTCCATGACCTGAATGGACCTGGATCACAGTTGTTAGAAATATCTTTGAAAGAGAGGAACCCAAATATATTCATGATTAAAATGTGGGATTTGTTACCATTCGACACAGATCAGACTCACATGCAGAATTGTGCTTGGGAAGAGAGGTTCTGTTAAAACGCTATTTCTGGAAACTTTCAAATTGCAAACGGAAAGTCGGACCCACTATCTAAAGAGAAATGTACTGGAAAAAAAATCTGAAACCTTGACAAACTGTGTATTGGATTGAACATGTGGAATCAACGCAGCGAGCTTTTCTGCACTAAAACGTACCCTCGTATCTACAACAAAGATGTGTGTATTACATGACAGTGACGTGTACATTTCTGACATCCCATACATCATACACACAGTTTGTATAAATGCATACATTTAAAAATATATATGTACAGTACAGCTACCATAAACCTGTAGTACGCTTGAAGGATATGACCAGTGCCTAATGTTGAGTATAAGTCACTGCGTGTTTAAATCACCTCAGAAGTGCAGTAATTGTTATCAAATTAATCAGTGCAGCCAACCTTATTTATGAACCACATCTTTGAAACTGTGCAGTAGTATATACATATATATTTTTAAATAACATTTTTCACAGTTTTCCAGAGTTACTGTTGAAATCTGTATCACCAAAAAAAAAAAAAAAAAAAGGCAAGATTTTTTTTAATGATGTAGACACTCTCCAAACCCAGTAATCTGTGTGTGATTTCCTGTGTGTAGATACCCAAGACACTTTAGCAGTCACCAGCCTTAATGCATGTACAGGATATTATTGTGACTTAATTTATCTGCAATTTTTAATCCATGTGAAATTGGAATTTATAAACTGACTTGGATTAACTATGTCTG EMBV3_39996 GCTCTCGGTCTACTGCTTCCTCGTCCCCGTTTCCAGACTCCAACCCATTTAACTCCAAAT Gene BVV0102_359791 + 0 NULL GK000029.2:45796216-45808353 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165546 1 XLOC_100550 Coding TCONS_00165546 XLOC_100550 Coding Coding LOC100848827 29:45796449-45800826 = TSS123631 552 1 TCONS_00165546_1 183 3 0.874542961608775 0.000419014860819297 0.00178396100273511 0.00164292071371405 0.00111323767727745 0.00150262004878743 0.000116643377090359 0.00100364508642194 0.000257162116937223 0.000200112369345789 0.00143858194017069 0.00012855925979257 0.000123076185879742 2.59898919867193e-05 7.6695544863264e-05 4.04001967195628e-07 0.0105741827327341 0.00282719983684207 0.0214999718642679 0.000623559277276779 0.00432529169346842 3.29970125521635e-05 0.0116015153684093 0.00292506068328385 0.00476820321672433 0.000941369245380292 0.000701994928158743 7.43008971864608e-05 0.00238389676845016 0.00131918767119207 0.00588154741072776 XM_003588060.2 LOC100848827 PREDICTED: Bos taurus lysine-specific demethylase 2A-like (LOC100848827), mRNA. 0.0 987 100.00 0.989130434782609 NM_012308.2 KDM2A Homo sapiens lysine (K)-specific demethylase 2A (KDM2A), transcript 0.0 746 91.59 0.945652173913043 TCONS_00165546_1 sp|Q9Y2K7|KDM2A_HUMAN KDM2A_HUMAN Lysine-specific demethylase 2A; 4e-114 354 93.92 0.983606557377049 0 coding 0 0 0 0 -0.15339107710934 0.443179962069472 -0.0345238941645423 0.632766726168615 ATGCCGGTTCCTAATAAGTTCCGCTATCCATTCTACTACGAGATGTGCTGGTACGTGCTGGAGCGCTATGTGTACTGCATAACCAACCGCTCTCACCTAACTAAGGAATTTCAGAAAGAGTCTCTTAGCATGGATTTGGAGTTAAATGGGTTGGAGTCTGGAAACGGGGACGAGGAAGCAGTAGACCGAGAGCCCCGGCGCTTGAGCAGTAGACGTTCTGTCCTCACCAGCCCTGTGGCCAATGGGGTCAACCTGGATTATGATGGACTGGGCAAAACCTGCAGAAGTCTTCCAAGTCTGAAGAAAACTTTGTCTGGGGACTCATCCTCTGACTCTAGCCGGGGTTCCCAGAATGGCCAAGTGTGGGATTCCCAGTGTAGCCCCCGAAAGGACCGACAGGTGCATCTGACCCATTTTGAGCTTGAAGGCCTTCGTTGCCTTGTAGATAAATTGGAATCTCTGCCACTGCACAAGAAATGCGTCCCTACAGGGATAGAAGACGAAGATGCTCTCATTGCTGATGTGAAGGTAAGGGTTCATTGTGTTGCATAA EMBV3_14803 GTCATCCTCTTTAACATCGTCATGCCACCTTTGCTGAACCCTCTGATCTACACGCTGAGG Gene GeneID:510451|LOC510451:XM_002693588:58_cdna Constitutive 0 NULL GeneID:510451 15 GENE LOC510451 NULL similar to Olfactory receptor 4S1 (Olfactory receptor OR11-100) EMBV3_02791 CTGCAGCCCTGGGAAGCTCTGTGGGACTACTACACGGAATGTACCTTTACAATAAGCTTT Gene GeneID:510539|GGA3:NM_001083404:374_cdna Constitutive 0 NULL GeneID:510539 19 GENE GGA3 MGC140036 golgi associated, gamma adaptin ear containing, ARF binding protein 3 EMBV3_24211 TTCTGTGACTTCTCCTACCGAAGGCCCAGGAAGTGTGCACTCCGATACCTCTAACTAATC Gene GeneID:539222|PBX3:NM_001046453:38_cdna Constitutive 1 NULL GeneID:539222 11 GENE PBX3 MGC134053 pre-B-cell leukemia homeobox 3 EMBV3_40326 CAGGATTCTTGCTGAAGGCAGGCTAGGTAATCAGATATTTCCTGGGGGATGCTAGGGGTG Gene BVV0102_180267 + 1 EMBV3_13793 GK000022.2:31769467-32285751 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40387 GAGGCAGAGTCACTTCTTTCCTCATGATGTGCTAACCATCGCTGGAATCCTGCCACTGAA Gene BVV0101_011150 - 0 NULL GK000003.2:20147755-20172324 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168984 TCONS_00168980 TCONS_00168982 1 XLOC_103243 Coding TCONS_00168984 XLOC_103243 NonCoding Coding ENSA 3:20142167-20157594 j TSS126623 10191 5 TCONS_00168984_19 100 0.269453439309194 4 0.339621418384546 6.78842131549352e-08 4.60659585763413e-08 4.88413027160538e-08 0.000589761136287721 3.80510817865133e-08 1.53814943844064e-06 0.00012946670538278 2.64489800388989e-08 9.42717501723543e-07 0.000194307900693869 6.65483451699001e-05 1.27081327229932e-07 0.000304367580795532 3.86951290210857e-11 7.03862060539037e-09 0.00706447161731581 0.00190264299277751 0.00640895876610834 0.00409973213452662 1.57375948662502e-08 0.00153005550085914 0.00293158342929678 0.000104646464716716 0.00251887426401239 1.88248474194446e-06 0.0012261592480524 0.000865153465303948 0.00068831518680347 0.000285286753071242 7.47196985432283e-09 NM_174050.1 ENSA Bos taurus endosulfine alpha (ENSA), mRNA. 9e-140 504 96.12 0.0302227455598077 NM_207046.1 ENSA Homo sapiens endosulfine alpha (ENSA), transcript variant 6, mRNA. 0.0 1092 83.59 0.0997939358257286 0 noncoding 0 0 0 0 -0.442430235734556 0.212610885888656 0.0155059525191226 0.780770592626428 GAGTGGGTGAATGAAAGGGGGTTGGTGGTCTCGGGATGAGATGACACCCAAGAGAAAGAAGGTATTCTCCCTGAGAGAGCTGAGGAGGCAAAGCTAAAAGCCAAATATCCAAGCCTAGGACAAAAGCCTGGAGGCTCCGACTTCCTCATGAAGAGACTCCAGAAAGGGCAAAAGTACTTTGACTCAGGAGACTACAACATGGCCAAAGCCAAGATGAAGAATAAGCAGCTGCCCAGTGCAGGACCAGACAAGAACCTGGTGACCGGTGACCACATCCCCACCCCCCAGGATCTGCCCCAGAGAAAGTCCTCGCTCGTCACCAGCAAGCTTGCGGGTGGCCAAGTCGAATGATGCTGCCCGGGGCTCCGCCAGATCCTGAGACGCTGCCCCCTGGGTCCTGTGCTGGCTCCTGCCCCTCCCTGCTTTTGCAGCCAGGGGTCAGGAGGTGGCTCGGGTGCGGGCTGGAGAGGCAGAAGCCCCTGCCCGTCGGTGTCCCAGCGCATGGAGCCCCTTGGGCCGAGCACCAAGACCTTGACTCTTTTTTGTTTTTTCTTTTTTTTCCAAGTAATTGTTGGGAGACATCACAGTGAAATCCTGGGGGTTGGGTGGGGTGGGGGGTTGAGAGGGTGGAGTGGGAGATGTGCGGGGTTATGAATTAGGACTTAGAGTTGATAACAAAAACATTCCTAACTATCCTCCTTCTTGACCTTGTAGCTGGGGTGGGGTGGGGGTGGGGTGGGGTGGGGGAGTGAAGTGGACTGAAGGTGAGGGGTTCTAATTGAGCTGTGTAGAAGAGTGCCTTGCTAGCTTGGATATGACTGGGGACCTGATGTCAGATAAAAGAAACTGTCTAAATATGAAAGATGCGGATGACTCCTCTGGTTCTGCAGAAAAAGCTAAGAACTGAATGTTAATTGTTTGGGTGGGGAGAAAAGTGCTGTCTTTGAAGTAGATTTGCTGTGGGAGGAAGGGCAGTGAGTGTGGGAGAAAGGGGATGAGTGTGGGGAGCACCGCAGAGCCCAGGGGACTTTTTCAGTATTTGAAATAAAAAACAAACAAGAAGATCCACGGAAAACAAAAAAAACAACAAACCAACCCAGAAATTCTCTGCAGCAGTTGGTGTGTTTTATTGGGGTTTGGCAAAAGGGAAAACAATAAGACTGAAGACACCAGTCAGGAGAAGCTGGTGTGGGGTTCTGAGCCTCTAAGGAACAGGGGCCCTTCGGATGGGATGTGTCTGGGTTCTCCATTTCCATCATTTAGGGAGAGGGTGCAGGGACATTGGCATATAGACCAGGACTTCTATAGCTAATGCAAAGATGAATCTTCCTCATCACAAAATGAGGGGTTTGCGGTATTTGATCTGAAGGGTTTATTCACACCTGAAGATTACTCCAGGCTAAGCATGAAAGGAAGCCACTCTGTTTTCCCTTTCAGTCTTCTTTTCTTCTCAAGTTCCTGTGTCTCTGGAGAATTGTAACCATTAGTGATCAGCCTTTCTGCTAGTGGCCAGCAGGAGGCAGAGTCACTTCTTTCCTCATGATGTGCTAACCATCGCTGGAATCCTGCCACTGAAAAGGGTTTAAAACTATCTGTGAGTGTAATATACAAAAGAAGTGTTGCCAAAGGAGAAACAGACTCACACTTTTCTTCTGTCACACTCACACCAGTCTACCATGTGTGAAGATGGAAACTTGCCCATTTGCCTAAGGAGATTTTATGATTAGGAGATTTTACCATAGTTATCTTCTCAAATGAGCATGCGTCAAGGAAGACAGAATCCCGGAGACAATAGATGTTCTAGAGAAATTTCTATCACGTTGAGAGGGTGGAGTACTTCTAAACTAGAGAAGGAATGTTCTCAGCATGTGATTCATTCTCTCTTCTTAATCAGAAACTTTCCAAATAAGTTTTCAGCTTCTCAGGAAGCTGACTTGCTCTCTCCTAATTTAGTCAGGGGACTGCGATGCCTCCTAACCATCAGCCTTTCTGAACAGCATGCTAGACACTGAGCTAGGTGGTTTGTAGGTACATTAAAGAAAGGCATGCCCCACCTTTAATGGGGTTTCTTATCTAACTGGAAGAAAATACATGAAAAAGTTCATATACTTCAGTAGTATAAACTTACATCTTAAAGCTAGGAGATGGATGTGTGTATGTAAAGCTAGGAGTGTTTATTATGATGGGGTTTCTGAGTCTTACTCCCCTTACGCCAGTCCCATGACTTCTTTTTGAGCACATTGTCCCTACTTTTATGTTTGCCAAGTGGCAACAGCTGGGCAGTGAGGTCAACAAGCCTCCAAATGCAGAAGCGTCAAGTTCCATTTAATATAAAGAGAAGGGACGTTGACATAGAAATAAGTTATTTACGGCAGTGCTAGTTTACTGAAGACCTTGAGTTAACATCTCTTAACTTTTAGGCTTTTACATGCTTTTTCCATTACTCTTGGCTTTCCTGGTCCTTAGGTTTAAGCTGTGGCCTTAGGAATCCTGGGGTGCCCAGAAATAGTCATTGCTGTTTCTGTTCCAGTTTAAAACCTGCCTTTCCTTTTCCTTTACTCATATGACAGGGCTAGGCAGTCAGGAAGCCCGATTCTGCAGTGCTTCAAAAAGCTGTTCTTGCCCATTATTTTAGCTTAGTGTTTTATCTTTATTCCAAAGAGTGGATTCAAGGGTTCTGCCACTCCTCCAGCATGGTTGAGTGATAATTGTGTTGACAAGTCTCTCAGTTGAGCCGTCTGATATGCAAGGTGGCAGGGATGAAGTCACAATTATTATTGTCCAACCACATTTATTTTAAGCTGATGTGGCCTGAGCATGGAAAACACAGGCAAAAGGAAAATAGCTGGGAGGATTGCCATTGAAGATATCTACTGTTGGTCTGCCAGCCACACCCACACTAGCAGCCCTTATGTGTACAGTGCCCTCTACTGGACCTTGAGGGAAGTCAACAAGCAAAGGAAAGATCTCTTCCCTTGGAAGCTGAAGTATGACAGTGGCATGCAAGTAAAAGCAAATTAATGTAATAAGATCCCACAAAGCATATGGGATCTTAATTTCCTGACCAAGGATCAAGCCCATGCCCCCTGTGGTAGAAGCGCACAGTCTTAACCACTGGGCCACCGGAAGGTGTCCAGATTACTGTAGTTCTAAGCAGAATTCCTGTGAACTAAGAGGAGGGTCAGGAGATGAGTTGGCTGAATTTCCTTAGAGATGGGTGACTTACTTAAAAAGATAAGGCCCCCCATGCTTGGGCAGTGATTTTTTAATTCACAAGGAATTGATGAAGTCTGACTTTGGGGAAATACTAGCAGTTTTTGACTCTTTGCAGTTGGAAATACTAGCAGTTATTGGGCAGATAACAGTGTAAGAGATGGTGTCTGTCCTGGAAGAACTTGAAGCCTCACTGAGATAGCACTTCTACATATAATGCAAGATAGTGGTAAAGGAATTCTGAGAAGGGAAAATTCAAAGGGCTGGAATCATGAGGTAAATATTAGTAGAAGAAATGGAAATTGAACTGGGCTTTAAAAGATGGGTAGTATTAAAGAATCTAGTTCAATTATTAGTTGATAAGTGCCTATAATATGCCCCTGGAGTAGGAAATGGAAACCCACTCCAGGATTCTTGCCTGGGAAATCCTATGGACAGAGGACCCTGGCAGGCCACAGTCCATGGGGTTGCAAAAGAGTCAGACACCACTTAGAGACTAAACAAGTTGCAAGGAGATGCCACTCTGGTGGGGAAACTACACGTGAGGAAATCATGCCGCAGCGTTAAACTTGCAGCAGAAGTTCAGCTACATAGAGGAATAGGGACAAGTATTTAATAGTAGCATCTAGCCCATTGTTAAGTCCTTAATTTACGTCATCTCATTTAATTCTCATAACAGTTCTACGAAGTAGATAGTATTGCCATTATACAAGTGAGAAAACTAAATCAGTAACTTGGCCAAATCACACAGCTTCTGAGAGTGGAGGCAGAATTCCAGTGCCTGCAATGGGATGGCGAGAAGAGTGATCAGGAAACGCTTCTACTACCTGGCCTGGTTCAGTCCCTGGTTAGGGAATTAGGATCTCACAAGCCACACGGCACACCCCAAAAGAAAGTAATCAGGAAAGGTTTCATGGAGCAAATTCCGAAGGAGAAACGAGATTTTTCTAGAAAGGTGCAAAAGGGCATTTTGGTAGCAGGACCAACACTAAGAGAAGGGTGAGGCAATGTGGAATCTGCTGATTTTGCAATACCGTATCAAGTGAGTCCTGGGGAGGGACGAGCCCAGGCCAGAAAGGCAGGCAGAAGGATATGATTTGCAGGCAGGCATGGGAACCATGGAGGTGACTGCAAAGAAGAAATCTAGTTGGTTCTGTGTTTTAATTAGGTCACTGCCAAATCGTGTGGAGATGAAATTTAGTTGTTTAGGCGCTCAGTCGTGTCCAACTCTTTGTGACCCTGTGGACTGCAGCATGCCAGGCTTCCCTGTCCTTCACCATCTCCCAGAGCTTGCTCAAACTCACGTCCATTGAGTCAGCGATGCCATCCAACCATCTCGTCCTCTGTCATCCCCTTCTCCTCCTGCCCTTAATCTTTCCCACCATCAGGATCTTTTCCAATGAGCCGGCTCTTCTCATCAGGTGGCCAACATATTAGAGCTTCAGCTTCAGTACCAGTCTTTCCAATGAGATTTAGAATTGATAAATTTAGTGATGGACTGGTTCTAGCATCAAGTTTCCTGGTTTTAAGTCCTGATTTTGATACATTTGAATGACTTGAGACAAGTTTCTTAAACTCTCTTTGCTTCAGTTTACTTATTTTATAAAATAGGAATGATGTAGTACCCACTGTACAGGATTTGCCGTGATGATTAAACAAGATAGAACACGTGAAGCCCTTACTTCAGGGATTGCAGTAGTGCCTAAGATATGGTTCCTGCCCAGGGAGCTTACAGACTATTGAGGGATATACTGAAGATAGGCAGACTGACAATAATTAGAGCACAAGGATTCGGAGCTAAGATAGGGAAGAGCGTAAAATGGTCTGGAAGTACAGAGTCTGGGCACCTAATTTGAGTAAATGGGAGGACAGCCAGGAAAATCCTTACACAGAGAGTAGCTTCTGAGCTGAAATATGATGGAGTAGTAGGACTTAGGAAAGGGGGTTAGATTGGGAAAGGGGGCCTTCCAGGTGGAAGGAACAGTCTGAAAAGATGCAGAGGTATTACATTCTGGCAACTTAAAATAACTGAGTAACTGTAGCATAGCATGCAAGGAACGAGGCTGGACCTGGGTGGAAGTAACCAAGGGTTAGGTCACAAAGGGCCCGTTAGGCTTCATCCTGGAGTCGTTGTGAAGCTGCTTAATAAAGATTTTGAGCAAGGAAATGACATGATCAGATTGGCCCCTTAAAATAATTTTTTTGATTGTAGTGTCAGGAGGAGACTGGAGATGGTAAAATGGGTGTATTAAAGATACTACTAATGGGATGGAAAAGGAAAAGGCTACTGTGAAAAGGAAGATGATGAATTCTATTTGAGACATAAGTTTAACAAACATCTAAGTGGAGAATTCTGTACTTGTAAACTGTTAACCATGGGTTAGTTGAGGTACAGTAACAGCCTGTATGTAGCTAGAGTACTATAGGTTAGATATGATGAGGAGATAAGGTAATGATCGTGGGGATGAAGACTGAGCAGACTCAGGAGATACATGAGAAGTACAATCAACAGAAACTGATGTGAGGAGTGGGACTCGGAAAGAGACAGGACACTATTAAAAAATTCTGAGGTTTCTGGCCTGAGTTACTGGGTAAACTATGATGCTGTAATCCAGAGAGAACACAGCTGGAAGAGCAAGTTTGGCATGGAAGACAATGAGTTCATTTTGCAGAAGAGTTGATGTGAGGTGCCTGTAGGACATCCAAGAGTAGGTTACAAGATTTATGTTACGTTACTGCATTTATGCATCTGGAGGTTGGAGAAAATTTCAGAACAGGAGATACAAATTCTGTAGAGCTCAGGATACACTAGTAAAGCCATGGACATGTAAGTAACAGAGAGCAGAAAGCCTGACAAACTGACCCGATGAAGGCTGACACCTGAAGGAAACAGAAACAGGCTCACCAGAATGGAGTCAGGATGATGTGGAGCCCAAGAACAGAGGTAATGGAGAAACTGAAGCAGTCAGTAGTGTAAAGCACTGTTACAAGTAAAATCTCACTGTGTAATGAAGTGTTAGTCGCTCAGTGGCATCCAACTCTTTGCAACCAAATAGTCTGTAGCCTGCCAGCCTCCTCTGTCTATGGGGTTCTCTTGGCAAGAATACTGGAGTGGGTCGCCATTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCCGCATCTCGTGCATTTCAGGCAGATTCTTTACCATCTGAGCCACCAGGGTGCCCCCAAATTTCAGGAAAGCAGCATGCCAAAATTGTGAATAACTGTCAGGATTATGGTTTAAGGACTGTATGTATGTTTCTACTTTCTGTACTTTTAAAGATTTTGACATGAGCATCTATTTGATGATTAGAGGTACTTTTAATTCTAAAAACAAGAATAAAATCACAGTTGTTTTTTTTTTTTTTTTTTTTGGTGGACGAAAGGGTGTCAGTTTGATTTACCAGTTAGTAATTTTTTGGGACCAGTTTCAGTGTATTGGTAGAGGTAGAATCTTGCTTGTAAACCTGAGTGGTGTGTGAAGGTTTTGTTGTCTGTTGTTGTTTTAGAATGAGAATGACAGGCATGTATATTTACAAAGTAAAAGTAGAGGCATCATAGAGAAGGATGATAACCAAAAAGCAGGGCTCCAAAAAGGGTGGGGTGTGGAAACAACTCAGGTGGATGTGGTTAATTAAACAGTAGTTCAGCAAACATATACTGAGGACATATGTGCCAGCCTCTGTACAAGGTGAGGTACTGAAGTTAATCTAGTTAGCAAGCCAGCTGAGTAAGAAATTGGTCTAAAGCAGAAGGACAGATGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATAGGGTCGTTGAGAGTCGGACACGACTGAGCGGCTTCACTTTCACTTTCCACTTTCATGCATTGGAGAAGGAAGTGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCGGGGATGGGGGAGCCTGGTCACACAGGGGTCTGACACAACTGAAGCGACTTTACAGCAGCAGCGGCGGCAAAAGGACAGATGCCTCATCCTGCTTGAGACTCAAGGTGAAGACACAGAACTTTGTTTGCAAAGTAGAAATAGAGACACAGAGGTAGAAAACAAATTTATGGATCCAACAGCGGGAAGGGGTAGTGAGAAGAATTGGGAGACCAGGATTGACACATATACACCACTATGTATAAAATAACTAATGAGAACCTACTGTATAGCACAGGGAACTCCACTCAGTGCTCTGTGGTGACCCAAATGGGAAGGAAATCCAGAAAAGAGGGAAGATAGGTAGATAGATGTATAGGTGATCCTGAGCACACATAGCTGATTCACTTTGCTGTACAGCAGAAACTAACACAACATTGTAAAGCGGCAAAATATAAAAAAAGATGAAGATATAACAATGGGTAAACTCACAGCTGTTTGTGAATAGGGGTCGGTAATTTATAGGAGTCCTTGTCTGACGGCTTTCTTGTTCTTGTGGAATAGGATGTGAAGTTACTACTTGAGAGTTAGGAAGGTGGGAGTTAGTGGACTTAAGAAGAGTGGCCATAGTGTTGAAGAGAGGATGAAAGGGAGGAGGATGAAAGAGAGATGACAAATAGTACTGTTATTAAGTAAATGAATTAGGAAACAGTGGTGAGGGTCTAACAGAAACCGTGAACGTATAATCCTTGGAACGCGTAACCCATTGGAATGGTGGTGGTTGTCCAATCACAGTCGTGTCTGACTCTTTGCAACCCCATGTACTACAGCACACCAGGTTTCCCTGTCCTCCACCATCTCCCAGAGTTTGCTCAAGTTCATGTGCATTGAGTCAGTGATGGTATCTTACCATCTCATCCTCTGCCGCCCTCTTCTTTTGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTCCAATGAGTTGGTTCTTCACATCAGATAGCCCAAGTATTGGAGCTTCACCTTTAGCATCAGTCCTTCCAATGTATATTCAGAGTTGATTTCCTTTAGGATTTGGTTTGATCTTCTTGCAGTCCAAGGGACTCTTGAGAGTCTTCTCCAGCACCACAGTTCGAAAGCATCAGTTCTTCAGCACAGCCTTTTTTATGGTCCAGCTCTCAGTGACACCGTTGGAAAGGTATCAGTTCGTTTATTTCTGCTGTTTTCTCTAGTAACGCCTAGCTGCCTGGGTACAAGAGCAGAGAAGACTTATTATTGTGTAGATCCTGGATCATGATTTGTAGACAGATGAAGAGGATTGACAGAGGAACAAGGGGGTAGAAGGTGTTGGTGAAAGAAGGAATACTTGATTCAGACTGGGTAAGAAGGTTGGCTAAGGAAAGTATGATAAACTCAGGTCAAGAGAAGCCTTAATAAGGTCAAAGAGCAGATGATTTAGAAGTGATAAAGCTGGAAGCTCAGGACATGGTGTCACAATGATGTTGGCGTTTCAGATTTCAGAGTTGGAACTCTTCCATGTCATGACAAGGGCAATAGGAACAGGCGTTTCAAGTGGAGTAAAGGTAAAGATCGTTGGGGTGTTAAAGAACTAAGGGAGTTTCCCTATCAAGCTGCCAGGGTAGGTGGCTCTTGTGTTTGAGCTTTTGTTCTATCTTATTAAGCCTAACTGTATTTTTTTTTTTTTTTTTTTATAAAAGGAAAATTGAAGAGTCTTAACTGAGAAAACAATAATAGCAACAATAAAAGAATTATGGGCTTAGAGTGTTGGGTCAGTAAATCAAGGTGTTTAAATGAATCTAGAATTATGCAAGACTGGGGAGGAGAAGATGAAGCCAACTTCCAGTCCCGGTATAGGAGTGACCAAGAATAGCAGAGAATATGAAGGAGAATTTAGCTTGATGGAATGAACTCCAAAGTAGGAGGGGTTACATACGAATGTCTTGGAAAAATAAGGGCCTGAGGATGGCACTAGGGAACTAGAGTGTCTCAGTTCCCCCACTTTCTGATATAGGAGGGGAAAACCCTGTAGGTCTGCAAATAAAGCCATGTTTAAGGGTAGCTTCAGTGTAATTTAAATGAGTGGGTTGAGGGAAATTCTTTGAAGAGGAGTTACTGTGTATCAGAGGTATCAGAGAAATGACGGGGCCAAGGTTGAAAGTAGCAGAGTTCTGCATTTGGGGCAGAGTCCAAAGATTATAGAGATGGCAACCACTTGTGCAATGAATTAGCCTTAAGGCTCCCAACTTGGTTCAAAAGTTGTTTGGTACCAGTTTTTACCGAAGGCCTCACGGGGCTGTGGAGTTCAGCGTCCTCAGGCCTGCCTCTCAAGGCTCTGAGGGGAAGATTAAGCATTCCGTCTCCGAAAAGACATTCTGGGGAAAAGGGAATGGAATAGTAGTTTGAACAGTGATCACAAAGAGGAACAAGTAAGCCAGATTAAAGGAACAGCTGGAGGAGGGTCCTTCATTCACACCTTTATCGAGTATTGGCCTCCTACCAGGACTCTGTCATGCTCATTGCTACATCCCCAGTATCAAGTGTTTGGCACATATGTGTTCAATAAATATTTGTTGAAGGAATAAATTGTTCACTAACTTATGTTCAGATTAGTCTGTGAGTATTTGGAAAAAAGTAAAGAGTTTGACCTCTTTCAACAGTCTCTGAATGGCAGCAGTAGTGGATAAGCCAGGAAATGAAACTTCAGAGAGAACCATGTTGGAAGGTTACTCCGCACACAAAGCTGGGTCTCCCTCTTGGAAAACTTAGATGAGCCCCATGACTAAGAGCAGGTAAAGGTCAAGTGCTCAGAATGTCAACCAAGGATTGCTTTTTCTGTGAAACATTAACTTCTGACAGGAAGAGCACTCAGCACTGACAGCCACATTGTGGTAAAGTGGCCCCTTCAGGTAAGAGAAGAGTTTTGGTATAAACGGAAGTTTTAGTGACAGAAGCACTTAGTGTTTTTATAATAGACGGACTTTTTTTGAACCTTCTTCTG EMBV3_15161 CAAGTCAGGCCCGCATGTGCGGAGCCAGAGAATGGCTAAGGGTGCTCCTGCCATATTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00426 CCTGCTGCACATTGGACTCAAAAGGAAAACCGGACCAACAGTAACTGAGGAAATAGACTC Gene GeneID:613818|TBPL1:NM_001076290:8_cdna Constitutive 2 NULL GeneID:613818 9 GENE TBPL1 MGC134257 TBP-like 1 EMBV3_37528 CTGAGCTTTCAGCTGAGCAAGCTGAGGCAGGAGACCAGCAGACTTTTGGAACACCTGGTT Gene GeneID:529335|MAP3K15:XM_002700353:19_cdna Constitutive 0 NULL GeneID:529335 X GENE MAP3K15 NULL mitogen-activated protein kinase kinase kinase 15 EMBV3_18959 AGATGAGTTAGAGGAAGACCACGAGGGGAAAGAGGAAGAATCCGCGAATGTTCCCACATC Gene GeneID:618203|TTC24:XM_002686009:388_cdna Constitutive 0 NULL GeneID:618203 3 GENE TTC24 NULL tetratricopeptide repeat domain 24 EMBV3_00821 ATGGCATCAGTGAACAAAGTGATCATCGTCGGCAATCTGGGCCGCGATCCCGAAATGCGC Gene GeneID:100298705|LOC100298705:XM_002683893:1_cdna Constitutive 0 NULL GeneID:100298705 Un GENE LOC100298705 NULL hypothetical protein LOC100298705 EMBV3_32594 AATGGGCATGTCCTCTCTCCTCACCGTTCTCATGTGACTAGGGTTTCTGACAAAACTGGC Gene GeneID:504846|PPP1R11:NM_001100295:57_cdna Constitutive 0 NULL GeneID:504846 23 GENE PPP1R11 NULL protein phosphatase 1, regulatory (inhibitor) subunit 11 EMBV3_22581 CCAGGCCTTGAGGACCATCGCTAACGACGACTGTGAGCTGTGTGTGAATGTTGCCTGTAC Gene GeneID:515664|GUCA2B:XM_002686453:470_cdna Constitutive 0 NULL GeneID:515664 3 GENE GUCA2B NULL guanylate cyclase activator 2B (uroguanylin) EMBV3_35353 CTGTCCACAGACCCTCAGGACCAGGCTTCTCAAGGTGACTGATCAAAACTGCAGAATAAA Gene GeneID:614252|RASL12:NM_001076933:266_cdna Constitutive 2 NULL GeneID:614252 10 GENE RASL12 MGC139757 RAS-like, family 12 EMBV3_07539 GGTATTGAACTCCCCCGTAGGAGCAGCAGCCTCCATTGAGTGGTGCCTGGGCTGGGAGGG Gene BVT0102_372530 + 1 EMBV3_04393 GK000003.2:102310398-102421542 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30103 TTCTTAGACCCGGGAGGGTGGTCGGGAAGCAAAGCGGACCTTCTGAAATGAAGGCGGAAT Gene BVV0102_096742 + 0 NULL GK000006.2:27638248-27790948 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00207561 1 XLOC_126076 NonCoding TCONS_00207561 XLOC_126076 NonCoding NonCoding - 6:27686897-27687518 - TSS155068 621 2 TCONS_00207561_2 70 1 0 0.000284821068968433 0.000275077644600546 8.94107122998174e-05 0 0 0 9.39083930045085e-06 9.52450111765641e-06 0 0 0 0 5.08247150677235e-05 0 0 8.50617747040463e-05 0.00192490161585038 4.04040148741438e-05 0.000230948240398761 0.000324250908733924 0 0 0 0.000350950725464469 5.57847341027958e-05 0 0 3.09345300362751e-05 0 0 0 noncoding 0 0 0 0 -0.0725927416083126 0.683536617025337 0.0716386739991245 0.168575226783851 TGGGTGTGCGTTTGCGGGCCGGCTGCAGCTGCGGCGGAGGAGCTTGATGGCGGCCGCCCGAGGGGCCGAGGGCGAGCCTTCAGAGGCTGGGCACCGGGATGCTGAGCCCGAGCTACTACACCTGGCTCTCTACCATGGCCCCCGCCAACCCACACCCGGAAAACGGGCCCGTGCTCATTTCGGGGCAGTCCAGGTGCACCGGCGGGAATTTCCCGAAGAAGGAGACGCTGGGCCTTCTTAGACCCGGGAGGGTGGTCGGGAAGCAAAGCGGACCTTCTGAAATGAAGGCGGAATGGACGTACTGGCCATGAGGCCAGCGACTCTGGAGACAGATACCTGAGAACGCCCGTTTTCAGAGCAGCCTATGGGCCCGCTGGGCACAGAGCAAGGAGGCGGCCGCTGGGAGGGCCCTCAGCATTAGGACTGTCTTGTCTGTGGCCATTAAAAAAAAAAAAAAAAGGTTCGGCAAACGAGAGGAGTGACCGTCCCGGGATTTCTTCAGAAAGTGTTGTTCTCCTTCCAGAGGAGTGCGGCCTTCCGTTCAGGAGGACACCTGAAAAGCTACGTAGAACTAGGGTGCCCTGGCCGTGGGGCGCCACCCTGCCGGGATATGCCCGGCTC TCONS_00204783 . 5' 36819 TCONS_00204783 . 5' 36819 EMBV3_00481 TTCTGAGAACTGCGCCTCTGCTGAGGGGGAGCCCGGGAACGGTGTCCTGTGGGAAAATAA Gene GeneID:614579|MRPL14:NM_001076337:353_cdna Constitutive 1 NULL GeneID:614579 23 GENE MRPL14 MGC138975 mitochondrial ribosomal protein L14 EMBV3_16605 AAAGACCTCCCAAGAGAATTTGGAGACCTCAGCCATAGTCAGGCCAATACCGTGAGTAGT Gene BVV0101_015292 + 0 NULL GK000030.2:59923438-60106180 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14413 GAATCCAAGAAGTTTGGAGGTCCTGGTGCCCGTGCCCGCTACCAGAAATCCTACCGATAA Gene GeneID:506297|RPS16:NM_001033624:550_cdna Constitutive 0 NULL GeneID:506297 18 GENE RPS16 MGC127222 ribosomal protein S16 EMBV3_32575 GTGTTGTGCCAAAGTTAAACTACTGCAAATGGCAGAAGTCCTACAATGTACATAGAACAC Gene GeneID:782847|ZHX1:NM_001110095:62_cdna Constitutive 2 NULL GeneID:782847 14 GENE ZHX1 MGC159821 zinc fingers and homeoboxes 1 EMBV3_14177 AACAAGAGAAGCCACTGCAATGAGAAGCCCGAGCATGGCAATGAGGAGTAGCCTCAGCTT Gene BVT0102_266423 + 1 EMBV3_22958 GK000014.2:65075315-65338358 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00057359 1 XLOC_035157 NonCoding TCONS_00057359 XLOC_035157 NonCoding NonCoding - 14:65130896-65131149 - TSS43036 253 0.956521739130435 1 0 0 0 0 0 0 0 0 7.01349367247924e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000602475128310194 0 0 0 0 0 XM_003582781.2 PUS10 PREDICTED: Bos taurus pseudouridylate synthase 10 (PUS10), partial 2e-34 149 73.86 0.857707509881423 0 noncoding 0 0 0 0 -1.04085638364128 0.0261460607344847 0.0123813188879559 0.788550174501436 ACTGAAATGGGGACTTCCTTGGTGGTACAGTGAATAGAAATCTGCTTGCTAATGCAGGGGACACAGATTCGATCTCTGGTCCGGGAAGATCCCACATCCTTGCAGCAACAAGAGCCTGTGTGCCCCAACTACTGAGCCTGTGCTCTAGAGCCTGCGCTCTGCAACAAGAGAAGCCACTGCAATGAGAAGCCCGAGCATGGCAATGAGGAGTAGCCTCAGCTTACTGCAACTAGGGAAAGCCTCAGTGCAGCAG TCONS_00053699 . 5' 53989 TCONS_00053699 . 5' 53989 EMBV3_04110 TGAATCTCTGTATATTTGATTCCTAGATTAGACTCTTCTTTAAAATGCTCTGCATCCTGC Gene GeneID:540235|TPD52:NM_001076922:58_cdna Constitutive 2 NULL GeneID:540235 14 GENE TPD52 NULL tumor protein D52 EMBV3_37490 CGCCGGTTACCGATCCGACTTAAGTTCCAGCTGCACGTCATTGACTCCTGGACCCAACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03806 CTGTGACAATGCAGGCTGTCTAAGAAGGTGATGTAATGATGGAAGCAGAGTTGGAGAAGG Gene BVT0101_043915 + 0 NULL GK000030.2:91869001-91897883 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247590 TCONS_00247589 TCONS_00247586 TCONS_00247592 1 XLOC_151368 NonCoding TCONS_00247586 XLOC_151368 NonCoding NonCoding LOC100848501 X:91886078-91891733 j TSS185376 1347 1 TCONS_00247586_2 100 0.547884187082405 2 0.762115316590025 0 0 0 0 0 5.51721207992623e-09 7.40882573398857e-114 0 8.30115600719507e-60 6.10912489704188e-06 1.92389040113697e-05 7.15531827832936e-218 2.86779501041557e-48 3.90322332768674e-66 9.58436158005496e-56 0.00473499795906076 0.003485227640363 0.00136736857497725 6.48254655711507e-130 0 0 0.00319799531014054 0.00156231540490866 0.00203771516666445 0 0 0 0.0010655259689355 0.000209389600227525 0.000255994180615995 XR_233006.1 LOC100848501 PREDICTED: Bos taurus uncharacterized LOC100848501 (LOC100848501), 0.0 2255 100.00 0.92724573125464 0 noncoding 0 0 0 0 -0.0778717710233712 0.67291301558717 0.00661827598003566 0.921561789797799 GAGACACCTGTACCACATAACTGAAGTATCTCAGCCAAAAGCCAGCACTAATTCATTAGCCGGGACTTGAAGACTCTGATCTGCTTGGTGGTGAATATCCCAGAGTGAGGTGTCTGAGCTCTTTGTATGTATATGTCCCAGGGAGGGAGGGTCATGACGGGTTTGTGGGTGTATATTGTGAGGTTTCAGATCTGTTTAGAAGTGAATTCCAGCAGGTGATGTATCTGAACTCATTTTGAGTGTATGTGCCAGGCTTTGAGAGCTCTCACATGTTTTTCAGTATATGTGCTAGTGTGAGAATGCTAATCTGTTTCTGGGTGTACTACCCTACATGTGAGGTCTCTGAACTCTTTGTAGGCTTATGTTGCAGGATTTTAGGTCTATGATTTCTTTATGGCTATATTTTCCAGGTTTTTAGGTCCCTGATCCGTTTGTGGGTATATGAATCACATATGAGTTCCCTGATTAGTTTGTGGGTATGTGTCTCCCAGGACATCATGTCTCGACTGATCTATGCATGTACATCTCTGTTCAGCTGAATACTGGCCTTCAATAATATCCCCGTCTCAGTCCCTAGTGAAAGTGTTAGTCATTGAGTCATGTCTGACTCTGCAACCCCAGGCTCCTCTGTCCATGGGATTCTTTAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCTGACCCAGGGATCGAACCTGGGTCTCCTGCACTGCAGGCAGATTCTTTACCATCTGAGCCACCTGGGAAGCCTGTGACTATGTTAACTTTCTGGCAGAAGGGACTTTGCAGATTTGATTAAGTTAATCACCAGGAGGCTGGGAGTTTATCCTGGATTATCCATGTGGGCCCAGTGTAGTCACTAAGGTCCTTACGTGTGGGAGGCACGATGGTGAGAGTCAGAAATGACACTGTGACAATGCAGGCTGTCTAAGAAGGTGATGTAATGATGGAAGCAGAGTTGGAGAAGGAGATTTGACAGCTGAAACAGAGAGAAGAGAGATCAGAGAGACATTTGAAGATGAAACGCTGCTGGCTTTGAAGATGGAGGAAGGGACCATGAACCAAGGACTGCAGACAGCCTCTAAAACTGGAAAATGAAAGGAAGTGCATTTTCCTGGAGCTTCCTGGAGGGAAGTAGCTCTGCTGACAACTTGACTTTATCTCTGTAAGACTCAATTTTAGGTCTCTGACCTATAGAAGTGTAAGATAATAAATTAGTGTTGTTTTACAATACCAAGATTTTAGTGATTTGTTATAGGAAATGAAGAGTGTCCTGGGTTGTGATGTCTGTATCTGATTGTCAGTGCCCATCCCAGGATGAGAACTCCAT EMBV3_21281 GGAGTTCTTGCCGGCCAACAATAGCAGTAAGACCGGAATGTGCGAGTCCAGAAGATCTTC Variant GeneID:767617|ST14:NM_001076538:176_cdna 243^345 1 EMBV3_29797 GeneID:767617 29 GENE ST14 NULL suppression of tumorigenicity 14 (colon carcinoma) EMBV3_30222 CTAGTAGCTCCAGAAACAGCAAATCAAGAAGACTTCAGAATCAGATATGCAACTCCACTT Gene BVV0101_005944 - 1 EMBV3_15941 GK000015.2:36251372-36515355 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32128 ACACTCTCAAGTCACTAACCCTTTGGGAAATACAAATGAAAACCACAATGAGATGTTACC Gene BVV0101_026769 + 0 NULL GK000004.2:5494385-5661071 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31273 TCTTCTTCCCCCCCTCTACCCAAGGACCTCAGTCTTTACTAAAACTTGTTATTTTGGCAT Gene GeneID:616526|BET1:NM_001099157:63_cdna Constitutive 1 NULL GeneID:616526 4 GENE BET1 MGC166065 blocked early in transport 1 homolog (S. cerevisiae) EMBV3_33510 ACTGTTAATAATGGTGGCTTCATCTGTCCTGACGCTGGCACCGCTGCTGCTCATCTTCCT Gene GeneID:529284|LOC529284:XM_002689702:164_cdna Constitutive 0 NULL GeneID:529284 8 GENE LOC529284 NULL similar to olfactory receptor Olr833 EMBV3_02875 CACGCTCCCATTCCCTCCACCACAAACTCTTCTACGTCATAGGGTATCCTGGGAACACAA Gene BVT0102_244756 + 0 NULL GK000018.2:54836605-54852870 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086961 TCONS_00086962 TCONS_00086960 TCONS_00086959 1 XLOC_052301 Coding TCONS_00086961 XLOC_052301 Coding Coding SLC8A2 18:54850201-54864301 j TSS64626 4513 1 TCONS_00086961_2 274 0.0633724795036561 7 0.68040286545145 0.00620243882124613 0.00473257653294932 0.0058854678607285 0.0022853360522397 0.003809382655472 0.00137127843718471 0.00291669969326367 0.0030519323980849 0.00480110144526172 0.00075758205394853 0.00033665619966643 0.000643155997589441 0.00078356394896631 0.00321059823875668 0.00201189727234871 0.00101245045253581 0 2.22374744216988e-05 0.00391137788266848 0.006140063259871 0.00147624864350847 4.76838589957601e-05 3.86227121577646e-05 2.36864077362657e-14 0.00655398901661852 0.00465755385495958 0.00453031241201681 0.000115969087704123 2.76960710848249e-05 0.000188708070107605 XM_002695184.3 SLC8A2 PREDICTED: Bos taurus solute carrier family 8 (sodium/calcium exchanger), member 2 (SLC8A2), transcript variant X1, mRNA. 0.0 5398 100.00 0.662973631730556 NM_015063.2 sodium/calcium exchanger Homo sapiens solute carrier family 8 (sodium/calcium exchanger), 0.0 2518 80.73 0.612896077996898 TCONS_00086961_2 sp|Q9UPR5|NAC2_HUMAN NAC2_HUMAN Sodium/calcium exchanger 2; 0.0 557 99.27 0.996350364963504 1 coding 1 0 1 0 -2.35378810459415 0.00775356358655671 -0.0636668022968531 0.360647908732475 CAGGCATGAATTTCAGTATGAAAGAAGGTGGAGGGAGTGGGTCTCATTGAAAAAGAAGGTAAAGTTTGAACAGAGAACTGGAGGAATTGAGGGAACGAGCATGGGAGAACAGTGTTCTCAGCGGAAGGAACAGCCAGTGCAAAGACCCTGAGGCACGAGCAGGCTTGTTATTTCATTCTCAAAACACTGAGGAGGCCAGTGTTACTGGGGAAAACTCTTCAGGTGAAGATAGTTGATGACGAGGAATATGAGAAAAAGGATAATTTCTTCATCGAACTGGGCCAGCCACAGTGGCTTAAACGAGGGATTTCAGCTCTGCTACTCAACCAAGGGGATGGGGACAGGAAACTGACGGCTGAGGAGGAAGAGGCTCAGAGGATAGCAGAAATGGGCAAGCCGGTTCTTGGGGAAAACTGTCGACTGGAGGTCATCATTGAGGAGTCATATGATTTTAAGAATACGGTGGATAAACTCATCAAGAAAACGAACTTGGCTTTGGTGATTGGGACTCATTCGTGGAGAGAGCAGTTTTTAGAGGCAATTACGGTGAGCGCAGGGGACGAGGAGGAGGAGGAGGACGGGTCCCGGGAGGAGCGGCTGCCTTCGTGCTTTGACTACGTCATGCACTTCCTGACGGTGTTCTGGAAGGTTCTGTTTGCCTGCGTGCCCCCCACCGAGTACTGCCACGGCTGGGCCTGCTTCGGCGTCTGCATCCTGGTCATTGGGCTGCTCACCGCCCTCATCGGGGACCTCGCTTCCCACTTCGGCTGCACCGTTGGCCTCAAGGACTCGGTCAACGCTGTTGTCTTCGTGGCCCTGGGCACCTCCATCCCCGACACGTTCGCCAGCAAGGTGGCGGCGCTGCAGGACCAGTGCGCCGACGCGTCCATCGGCAACGTGACGGGCTCCAACGCCGTGAACGTGTTCCTGGGCCTGGGCGTGGCCTGGTCGGTGGCCGCAGTGTACTGGGCGGTGCAGGGCCGCCCCTTCGAGGTGCGCACCGGCACGCTGGCCTTCTCCGTCACTCTCTTCACCGTCTTCGCCTTCGTGGGCATCGCCGTGCTGCTCTACCGCCGCCGGCCGCACATCGGCGGCGAGCTGGGCGGCCCGCGCGGCCCCAAGCTCGCCACCACCGCGCTCTTTCTGGGCCTATGGTTCCTTTACATCCTCTTCGCCAGCCTAGAGGCTTACTGCCACATCCGGGGCTTCTAGGGCCCTCCGCAGGGACTCCGCCTCCAGCCTCGAGAGATCGCTGCATCCGTGCTGGACTGCATCTCCCTGGTCCTCCGGAGAGGCAACCTCCTCTCCGGGGACTCGGCCGCCCTTCCTCCAGGGACGTGATCGCCCCCCTCCTCACCGCCCCCACCCTGTCCTCCGTCCCCACTAACAGCCTTCACTCTTTCCCTCCGGAGCCTCCCCAGGTCCTCCTGCAAAGAACAGCTCCTGCAGTTACCTGCAGCTCCTGCCCGCATCCCTGTTCGTTACTGTCTATGTTCCTGGAGAAATTTCCACCTCGAGGCCCTCCCCCCCCGCCACCTCCACCCCGAGAACCCTACCCCATCTGTGACCCTCTCGATCTCTCCCTTGAGACTGCCAGCCTTGCTCTATCCCATAAGTCCCCGGTCCTCAAGAGGAACACCCCTGCCTCCTTCCAGGAACCTGTGCCCCAAGACCTCAGAACTTAGCCCTCCCTGAGGGGCCCTTGAAGGAGGCCGATCCATCCTAGGATGTCACGGATCTCGGGCCTCCCCCCAACCCTCAGGGGGCTCCGTCGGCCTGGGGGATAGGGGAACAGGTGGGTGCGTGCATGGGGGAGGGGACACACCTCCCTCCTCCCCCACCTCCGATTTCTCCACTCAGGCCCTTGGGAGGACGCTAATTCTCGAGGCTTGGAGAAGGGAGGGAAGGGGAGACGTTTGGGGTTTCAGAGCTGGAGGAGGCGCACTTTGGACCTGTAACTTCTCACATTCCAGAGCCCCCACTTGCCTCCACTACCTCTGAGAGCCCAGCCATGCCTTGGAGGGGAGGGGGCCTGTGTGTGTGTGTATATAGTGTGTTTGGGGCAGGGGGGATGAGGGAGGGTGCATGACTTGGGGAAAAGGGGGGGGGTGACAGACTTCTTTTGAGAGGGCAGCAGACACCCCCAGCCGTGAGAAGCGGCTTTGGGGAGGAGGCCGGGGATCCACGGGAGTATATAGCCAATCTCTCCCGACAATCTAGAAGGCTCAATTTGCCCTCAGTGCCAGCCAATTCGGGCAGGACCCTCGAAGAGGAGACCGAGGGTCCCAGAGGACCAATGCTACAAGCCAGCAAATGCTGCCACATCTCTGCCTGAAGGGGAGCAGGGGTGGGTGGGAGGGTGGGACGGGGGTCGGGGGGTCTGGGCGGGTGTTTTTAACTTTGGAGGCCACCTATCTGTTGGCTGGCCATGTACATTTTCTTACTGTTGATGTTTCCTGCCCAAAGGACATACTTGGGGTGTGAGGAGTGCTGCCTACTTCTTGGGACCCCCCCTGCAACCCCCATAACACCTGCTTCCCACCGGTTTTTAGCGTCCTATCCTCCTGTTGTGCATCACCCCCAACATCCCAGACCTGTTGCGTACTCCCTTCTCTACTCCCAGCTCATCAGCACTAGTCGCTGTCTCTGTGATTTCTGTAAAAGTTGCCATAAAACTGAAATTATGCCTGGAAAAACGGCCTCCCCGTGGGAAGTTGGAATTCACGACGAGAGAGCTAATGAAGTCTTTAAGATTTGGGCAACTGGAAAATACACCAAGTAACCTGGGTTTTTCCATGTTCCCAGCATCCTCTGCAGGACACGCCCGCTTGCACCAACCACTCTGAAGGTCCGCCCAGAGCTTCCCTTCACCACGCCCCCACGTATTACCCGGGAGCTTTACTAGCCACGCCCCCATCCTTCACCCAAGAGCTTCCCTGGCCACGCCCCCTCCACACAGGAGCTTCCCTGGCCACGGCCCCATGCCACCCAGGAACTTTCCCTAGCCACGCTCCCATTCCCTCCACCACAAACTCTTCTACGTCATAGGGTATCCTGGGAACACAAAAGAGGAGGATCCTACGTTGCCTGAGGAAGAGAGCTGGGGTTGATGGGGGTTTCCTAAAGAAATCAGGTAACTTTCTCAGAGGACTTGTGTGTGTGTGTGTGTCCCGATAAAGGGCACAGCCTGTTTAAAAGTGTCCAGCTTTGTGAGTTAATGACTGGTCGTCTTGCAAGTGGTTGAATCCTACAGGGAAGAATGGAGTGTGGACATGTGGGGAGTGGATCTGGGAGGGAGGGACTGGACAGCGTGAAGAATTTCCAGCCCAGAGAGTGAGGGCTTGAAAAGCCAAGTGGGGATAAGTACCAAGGACAGGCTTAGAGGTTTCAGGTGAGTTCATGCTGAATGTGAGATGCCTGTGAGCCATCTAGAGGGTGAAGAGACATCCGGGGGACACCTTGAGCTCAGCCCAGGGAGCTGCACTTGAGAGAGATTTGGGATTTGTTGGCAAGGAGGTGTCACCAAGCCACAGGAGGGGGTGGGGCTGCTCTGGGGCCTGGGTAGCAGGAGAAGAAAGCAGAGCCTTGAGGACCCCTAACATCTAAGGGCCACATGGAAGGTGGGAGACCTGTCGAGGAGAAGAAGCCAGAGAAGTTGGTGGGAAACCAGGAGAGTGGGGCAACTGAAGCCGAGAGAAGTTTCTAGAATGAGGGCATGGTCAGCAGGACCCAAGGCTGTGAAGAAGTGGAGGAAAATGAGAGCTTAGAGGCTCCCCTTGGGTTTAGATCTTGATGTAAGCAGTTGAGGGGAGAATGTGGGAGCAGAAGTCAGACTGAAGAAGAGTGAGGAGTGGGTAGAAGGTGGGGAAACTGAGTCAGAGCATGTAGATCAGAGTTTGGAGAATCTTGAGAGAGAGTTTCTAAAGGAAGTTACGGGCCTGAGAGGGCTTTTCCTGCAAGGTGGGAGGAGGTGTGGGGCAAGAGGGCACTGAAGGCAAGGGATCTGAACCTGGCGAGAACAGTGCCAACAGCGGCGGGCGTTGAGGAGGGCCATGATGCTTGCACTGTGCGGCCTTATGCGGTCTGCCATCAGTCATCAGAGTCAATTCCTTCTACTGAGGAAACAGGCTCAGAGAGAGGAGGCAACTTGCCCAAAGTCCCGCAGTGAGGAAGGGCAGAGAAGACGTCCAGGGCGCAGAACGGGAGCAGGACACGTTTAATTCTACCAGACGTGAACCAGGACAACGGGGACAGAGGCAGGGAAAGGTGTGAGCCTGGGGACAGGAAAAGGAGTGCGGTCTCTGCTTCAAACAGGGGCGTTTCCAGGGCTTGGGATTGGACACAAAAAGGAGCATCACAGATGCCGATTCACCCCACCAGCAACGCCATGTTCCTCGCCTGGATACAAGGTCTTCCAAGGGGCAGCTTGGGAGCAATTTGAATTATTTGTCATTGGAAACGACATAGCATAATGATTTACTGTCTTAGTGCTTCAGTTCCTTCACCTGGAAAA EMBV3_26588 GTCCATTAGATGTTCCTTAAGACTACACACAGACTGGCTGTTCAATCCGTTTTCACTCTG Gene GeneID:781153|FAM108B1:NM_001101278:5_cdna UTR3_Alt 2 NULL GeneID:781153 8 GENE FAM108B1 NULL family with sequence similarity 108, member B1 EMBV3_03538 GGGGGGCTGTTTTCAAGGCATGCTGGGTACCAAAGCACCTCATAGACTATCTGTTACAAG Gene GeneID:525941|SCG3:NM_001102097:77_cdna Constitutive 1 NULL GeneID:525941 10 GENE SCG3 MGC166329 secretogranin III EMBV3_01874 TGGCCACCTGTATATGTCTTTCCCTGCTGTGTTAGGAAAATGGGGGCTGGATATCCCAAG Gene GeneID:508431|ITCH:NM_001082428:955_cdna UTR3_Alt 3 NULL GeneID:508431 13 GENE ITCH MGC152011 itchy E3 ubiquitin protein ligase homolog (mouse) EMBV3_39825 CTCCGCTTTTGTCTTGCCCTCCAGTGAATGGGAAGATGGAGATGGATGTGGAGGGAGTTT Gene GeneID:100336434|LOC100336434:XM_002696866:261_cdna Constitutive 0 NULL GeneID:100336434 22 GENE LOC100336434 NULL hypothetical protein LOC100336434 EMBV3_33325 GTCTTGAAAACAGTGTGATGCAATTGCTGCTGTTCTAGTCCCCAAAGAGTTTTCTGTGCA Gene GeneID:533136|UBE3A:NM_001098462:2_cdna Constitutive 2 NULL GeneID:533136 21 GENE UBE3A NULL ubiquitin protein ligase E3A EMBV3_23996 GCTGCCGCACCTATGTGGACCACTACGACTACACCATCGAGAACGACACTGACATCGTCT Gene GeneID:541294|PLA2G2F:NM_001102522:263_cdna UTR3_Alt 2 NULL GeneID:541294 2 GENE PLA2G2F MGC159947 phospholipase A2, group IIF EMBV3_34295 GTGGTGTCTCCTTTACCTTTGGGGCTGAGGTGGTAGCCAAGTTCCTGCACAAGCATGATT Gene GeneID:100336432|LOC100336432:XM_002683598:2_cdna Constitutive 0 NULL GeneID:100336432 1 GENE LOC100336432 NULL protein phosphatase 1, catalytic subunit, alpha-like EMBV3_08433 ACCTGGTCCCCGCACGACTCCTCTGTCCGTGGCTTTCTGTGGATTCTGTTTAGTCCGTCT Gene BVT0102_279682 + 0 NULL GK000025.2:41778057-41817961 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147450 1 XLOC_089375 Coding TCONS_00147450 XLOC_089375 Coding Coding ELFN1 25:41817295-41820589 o TSS110015 3294 1 TCONS_00147450_2 801 1 0 0.00075688923082182 0.000706195821087487 0.000368024957919469 0.000305040755559055 0.00015249328177913 0.000177060673372661 0.000224149755228617 0.000916356153668312 0.000518582287287438 0.000132401623161219 6.25437869238339e-06 1.68809718948164e-10 6.85719352684026e-06 0.000551226595972694 0.00011890673965778 0.000114365835922827 5.04016086915722e-06 0 0.000313483203820039 0.000842712329329145 5.38801526686311e-05 0 2.78508528753009e-06 0 0.000731969321445609 0.000472692285437607 0.000339738263366471 4.46811405179165e-10 4.12656094734147e-05 3.34278542241264e-10 XM_005225229.1 ELFN1 PREDICTED: Bos taurus extracellular leucine-rich repeat and fibronectin type III domain containing 1 (ELFN1), transcript 0.0 4917 100.00 0.827261687917426 NM_001128636.2 ELFN1 Homo sapiens extracellular leucine-rich repeat and fibronectin type III domain containing 1 (ELFN1), mRNA. 0.0 2828 82.67 0.798117789921069 TCONS_00147450_2 sp|P0C7U0|ELFN1_HUMAN ELFN1_HUMAN Protein ELFN1; 0.0 1252 81.73 0.998751560549313 3 coding 0 0 0 0 -0.0868765385653031 0.738999258582631 -0.0258838377639755 0.740579617183261 CCGATGGGGAAGCAGGCCGAGGCCCCGGCCGGACACGGGCGGACGGAGTGAGGCCGCCAGCCGTGAGGGAGGCGCTCCCCTCGCAGCACGTGGGCCGCGTGGCCATGTGCCTGGGACGGTCCTGAGCAGACGGGCGTCCTCCCCTCCCGCGCACCCCACCGCCCAGGCCCCCACCCCGCGCCCTGGGCAGGCTGAGCGGGCAGCCCCCGCAGGCGGGTCCCGATGGCTGGGTGCGGGTGGGAGGCGCCGTGGGTGTGGGTGTGTGTGGCGGCCGCCCTGCTGCACGCGGGCGGGCTGGTGCGCGGTGACTGCTGGCTCATCGAGGGTGACAAGGGCTTCGTGTGGCTGGCCATCTGCAGCCAGAACCAGCCGCCCTACGAGGCCATCCCGCAGCAGATCAACAGTACCATCGTGGACCTGCGGCTCAACGAGAACCGCATCCGCAGCGTGCAGTACGCGGCGCTGAGCCGCTTCGGCAACCTCACGTACCTGAACCTCACCAAGAACGAGATCGGCTACATCGAGGACGGCGCCTTCTCGGGCCAGTTCAACCTGCAGGTACTGCAGCTCGGCTACAACCGGCTGCGCAACCTGACGGAGGGCGTGCTGCGCGGCCTGGGCAAGCTCGAGTACCTGTACCTGCAGGCCAACCTTATTGAGGCGGTGGCGCCCGGCGCCTTCTGGGAGTGCCCCAACATCGTCAACGTGGACCTTTCCATGAACCGCATCCAGCGTCTGCACAGCGCCACCTTCGCGGGCCTGGCGCGGCTCTCGGTGTGTGAACTCTACAGCAACCCCTTCTACTGCTCCTGCGAGCTGCTGGGCTTCCTGCGCTGGCTGGCGGCCTTCGCCAACGCTACGCAGGCCCACGACCGCGTGCAGTGCGAGTCCCCGCCGCTCTACTCCGGCTACTTCCTGCTGGGCCAGGGCCGCCACGGCCAGCGCAGCATCCTGGGCAAGCTGCAGTCTGTGTGCACTGACGGCCCGTATGCGGCGGAGACCCGCCCGGCGCCCGGCCGCCCCCCGCCCGGCCGCTCGCCGCCGCCGCCCCCCGAGCCCAGCGAGGCCCCCTGCGCTGAGGACGAGTGCTTCTCCGGCGACGGCACCACGCCGCTGCCCACGCTGGCCCCGCAGGCCGAGGCCCGCCCGCTCATCAAGGTCAAGCAGCTGACGCAGAACTCGGCCACCATCACGGTGCAGCTGCCCAGCCCCTTCACCCGCATGTACACGCTGGAGCACTTCAACAACAGCAAGTCGTCCACCGTGTCCAGGCTGACCCGGGCCCAGGAGGAGATCCGCCTGACCAACCTGTACGCGCTCACCAACTACACCTATTGTGTGGTGTCCAGCAGCTCGGGCCTGCACCACAACCACACCTGCCTCACCATCTGCCTGCCGCAGCCGCCTAGCCCGCCGGGCCCCGTGCCCAGCCCCTCCACGGCCACCCACTACATCATGACCGTCCTGGGCTGCCTCTTCGGCATGGTGGTGGTGCTGGGCGCCGTCTACTACTGCCTGCGGCGGCGGCGGCGGCGGGAGGGCAAGCAGAAGCAGGCGGCGGCAGCGGCCGGCAGCCTCAAGAAGACCATCATCGAGCTCAAGTACGGGCCTGAGCTGGAGGCGCCAGGCCTGGCCCCGCTGTCCCAGGGCCCGCTGCTGGGCCCCGAGGCGGTGACCCGCATCCCATACCTGCCCGCCGCCCCCGGGGAGGTGGAGCAGTACCAGCTGGCGGAGGGCAGCGGGACACCCAAGGGCAGCAAGGGCGGCTACATGGAGGTGCGTGCGGCAGAGCAGGCAGAACGCAGGGAGGGGGAGCAGGGCCGGCCGGGCCCCGACAGCCAGAGCTCGGTGGCTGAGATCTCCACCATCGCCAAGGAGGTGGACAAGGTCAACCAGATCATCAACAACTGCATCGACGCCCTCAAGGCCGAGGCCACCTCCTTCCAGGGCGGCAAGCCGGGCGCCGTGTCCACGGCCGAGCCGCTGGCCGGCAAGCGCGGCTTCCTGGCGCCCGCCTACCAGGACGCCTGCGGCCTGCAGCGGCACCACAGCCTGGAGGCCGCCCCCGGGGCCCCGCGGGCCAGCTCCTCGTCCAGCGGCTCCGCCCGCAGCCCGCGGCCCTACCGCGCCGAGCCCCCTGCGCTGCACGAGGCCAAGTACATCGAGAAGGGCTCGCCCGCGGCGGAGGCCATCCTCACGGTGACGCCCGCGGCAGCCGTGCTGCGGCCCGAGCCCGAGAAGGGCCGGCAGTACGGGGAGCACCGGCACTCGTACCCCGGGCCCCACCCTGTGGAGCCCCCCGCGCCGCCCGCGCCCCCCGAGAGCCTGGGCGGCCGCAAGGCCTCCATCCTGGAGCCGCTGACGCGGCCGCGCCCCCGCGACCTGGCCTACGCGCCGCTCTCGCCGCAGTACCGCCACCTGAGCTACGCCTCCAGCCCCGAGTACGCCTGCCGCGCCTCCCGCAGCCTCTGGGCCCGCTTCAGACTGAGCCGCCCGCGGCACCGGGACGCCGGGGAGTGCGTGGCGGCCGGCCACGCGCTGCGCCGGAAGGTGCAGTTCGCCAAGGACGAGGACCTGCACGACATCCTGGACTACTGGAAGGGCGTGTCTGCGCAGCACAAGTCCTGAGCGGGCCGCGCGCGGCCAGAGGACACTGCAGCTAACCCAGAGACTCACGGCGCACGCGCACACACGCACAGAGACTCACGGTGCACACGCGTGCGCGTGCACACACACACATACACACCCCCCCCCCCCCCCACAACTGCTGAAGCCCTGGGCTTTGCGGGCAAAGTGGGGAGGGGGCACCGGCAGGCCGAACGGGAGGGGCGCGTGGCTGAGCGTGTGCACCTGCCGAGACGTTCTCGCTGGTGTGAGGGGCCCGTCCACACACACGCGTGCACACACACACACACACACACAAAGGGACTTCCGAAAACTGTGTCTTAGGGATGGGGGGCGGGGGAGGGGATTTTTTTCATTATCTTTTGATTCTTCTCTGCCTTCTCTTCTTTTTTTAAAGTTCTCTTTAAAAGACGTAAAACGCTCTATGTGGGGGGTGTGGCCACCTGGTCCCCGCACGACTCCTCTGTCCGTGGCTTTCTGTGGATTCTGTTTAGTCCGTCTCTTCGTCGCCGCCACCAGAGAGGGCCAGAGCGAACGCAGGCGGCCAGGTGGTCTCCGGGAGGGTCCCGGAGCTCCCGGGACCTTGGGGGCAGGGAGGGCTGTGCCTGCAGACGGCCAGGGGTGGCGGGGGCCGGGAGTGTGCCTTCCAGCCCTGCCCCCACTATACAC TCONS_00147451 s 5' 0 TCONS_00147451 s 5' 0 EMBV3_18883 GAGGTCTAGAACACCAAATATATCATTGTCTTGGGCTCTTCAGTAGCTTCTCTGTGTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21518 TTCCATTTCCTGTTTCTTCTGTGAGTAAAGGAGGTAGGAAGAGTAATTGGAATTGCTCTT Variant GeneID:509460|THUMPD2:XM_002691293:389_cdna 273^676 2 EMBV3_11153 GeneID:509460 11 GENE THUMPD2 NULL THUMP domain containing 2 EMBV3_42020 GAATGGCTGATCATCTTGGCATCTCTCCTGGCCTTGGCTTTGATTCTCGCGGTTTGCATT Gene GeneID:281057|CD44:NM_174013:21_cdna Constitutive 0 NULL GeneID:281057 15 GENE CD44 MGC139880 CD44 molecule (Indian blood group) EMBV3_41011 CCATTGGAAACCCTAGAGAAGAAATTTGGTGCCCCTGTGTTAGATTTAGCTCACAGAGTA Gene BVV0102_318081 - 1 EMBV3_41049 GK000003.2:66931505-66969544 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170163 TCONS_00170164 1 XLOC_103532 Coding TCONS_00170164 XLOC_103532 NonCoding Coding - 3:66964752-66968725 - TSS127223 3973 5 TCONS_00170164_8 74 0.124087591240876 1 0 1.36981619738964e-05 0 0 0 0 0 6.43814831170748e-06 1.73747971364971e-06 0.000184414833340606 0.000146709094196919 6.64445190481834e-05 0.000188210705652308 5.90812733879351e-05 0.000160335211656174 3.11542801894778e-05 0.00185134155565851 0.00119026660656248 0.00121009289860216 0 0 0 0.000414926034228142 0.000646333245109542 0.000460628840721215 1.74388988180922e-06 0 0 0.000116848095244132 8.18016918612031e-05 0.000210919304012586 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 4e-57 228 88.52 0.0458092121822301 0 noncoding 0 0 0 0 -0.0584537942998188 0.715103650410876 -0.0514886572839718 0.323647981758818 NNAGTCAACAGGGGGATACCATTAACACCAATTATTCGATTTGTTTACCTAATTTTTATTTACTGTTTTTGAACTTGTTTAAAATCGTGACTGAAACGTTAATATAATGACAGCAACACTGTTAGAGGGGTTTTTAGAGAAGACTCAACCGAAATTAATTTATTCAAGCAGCATATTGAATCAGTTTGTTCCATACACTATACTTCGATACTGGAGACTTTTTAAAATGTGTTAATTGGATTTTTTGCTTTCTAGGAAGCCATGATATAGTCAAAGAACCAAATGCAAAAGAGTAGTAGTATCTGATAAATGCTTTCAAAGCGTAGACAAGATTTAGGCACTGTTAATTCGTCCATTTGTTCTGTAAACATTTATAGAGTTCTGCTGTGAATCAGGTACTGTACACATCACAAGGGAGTGGGGTACCCTACTGCCAAAGGACTGATATTTTAAGCAAGGCATTAAAGAATGAGAGTTTGACCAGTGGATAAAGAAGCAGCATGCACTAAGGTATGGGGGTTTGGGGGAAGATGAGAACCTGAGTGAAGTCATTGGAGATAGGGTTGGGTGGGGAAGGAGGGTGGAAAATGAGGTGAGAAAAAGTGAAGGTGGATACCAAGTTAGAATGCTTTTTTAATATAGAAATTGTCCTCAAACTATGAATTTCTTGTCCTTCAATAGAGTTTACAAGTGTCTTTGCTGTGATTTGATTATTTCTACAGAATTGATCTTAAATCTGATATTCTCAAGTTTAGCATTCGAGTTGAATTGCCCCTTCTCATGGTATTTGAGAATGCTTCCATATATATTGGTTGTAGCTGTTTGTCTGATTATTCAGGTGTGGAGTATAGGGAAAGGTGTTTGGGTTTACGGAACAAGTTAGGTTAATATTTGAACTACTTTTTTCCTTATTTATATTAAATGGATTCTGAATTGTATTTCCAAAATCTCCATCTAACCTTAAGTTTCTTTTCTTTGTCCAGAGTATTATGCTATGTTCTTTGGAAGGAAGAGGTATAAGAACAGCTTATTGCCTTCAAAGAGCTACATACTGGTGGGAAATCTATTGGCATTTCAGCTGAACAGTTCTTTGTTATGCGGGAAAGCAGAACAAATGATTAGGGTCCCTGGACCCTATCTAGTTAAAGCTAGTAGCATTTACTCCAGCTGATTGTTGCCATCTGGCAGTGGAGCTCGGTCTTTTTTCCAGAGAATTCTAATAGTTTGTTTTTTTTTTTAATGTGAAGTTTTCAGATTTTATAATACTCTGTGAGCTAAATCTAACACAGGGGCACCAAATTTCTTCTCTAGGGTTTCCAATGGTATAGTTTAGAAATTATATTTGGGTATTTCAAGCTTTATCTGTAGAGGGTGATATTGAAATTGTTTGACTAGATACTTAGTGGTCACACTGATAACAAGTTCTGTCCCTGAAACATTGGAAAATTAATGCATATCTACTTTTTTCCCCTTAAAGTTATATGAAGATAGAAGTAAATCTGAGACTGAGTAGTAGATCGTAGGTTAAGCAAGATTATCAACCCTCATCACTTCCCCTCTAAACTATTAAATTAGTCATTAGGTACTCAATTCTTTAAGTCTCTTCCTTGATAATTATGAAAGTAATTCAGACTATTATGTTTGAATAAAAAGAAAAATTTATAAAATAGAACTCTTGACTTTTTACTTACCATTATTCTCTTTCAGTGAAAACTAGCATTTGAGAGTTTTGTTTTGGGGGCTTTTTTTAGTAACATATTTTGAGATAGGATAGCAAAGCTTGATTATGATAATAAAGACTTAGGACTGTAGAGAGGGGACAATATTAATGAAGTGGCAGCCTAGTAATATTTCTAGCCTCTTCACATTTCTGGTACATGGAAACAATCCATTAGGACCTTTCCTATAGTGGGTACTCAGTATTTATTAAATTGAATGAATATATCTAATGAATTAGTGATGAAATTTTGTTTTGAAAATAATTGCATTCTTTCAAAATGTATGTCTTTGGCCAGTATAAATAAAAGGCTGTTAAAATTTTTGAACCAAACATTTGAAGTCTTGTGAACTCTGCATTGTTGAATTCTAGTGTGCTGAGTTGTTCATAGTAACTGGCAATTTATGTGGTACATACTAGGTCTCTGTGCTAAGCGTATGTGTATTAATTCATTTAATTCCCACAATTATCCTACAAGGTAAGTGGAGAAACTATTTATCTCTTTTGTACACAGAAGATGAATGAGGCACAAAATGCTTAAGGAAATTTGGCAAGGACACAAAGCAGTAAAACCAGAATTACCACTGACCCCAAATCACGGTTGGACCCCAAAGCCTAAGGAAGCATGTAGACTGAAACTTAGGAGATAGTCATTTGGGGCATTTAGGTAATTACTTCTGAAAGTCAATCTTTTGTGTGCTATTGTTTGTGGTTTTATTGTTTTGTTCTTGAAAATGAGGTGGTATGGCTGAATCTGTTAAATTTTCTTTCAACTCCAAAATTCTTAGATTCTAGGAATAATCAATGAAGAGAGGTGGACAATGCTCAAACAGTGAAAATACAAAAAATATTTACCCTTTTGAGAAGCAAGGAGAGTCCAAATAGAACACTCGTATTTTTATTGTAAATTAAAATCAAAGAAGTTGCCTACACTTAGTTCTACTGGTCTCATAAGAATTTTATATAGCTAGAGGTTGAATTTTAAGGATTACTATTTCTCTTAAAGTAATCCTGTGAAGTAACCTAGCAAATATATATTTAACTGATCAAATAGTAGTAGTTTTACTAGAAGATTTTTACTGACATTTTTAGTGATGGGGGCTTCCCAGGTGGCACTAGTGGTAAAGAACCTGCCTGCCAATGCAGGCGATGTGGGTTTGATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGAAATGGCATCCCACTTCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTGGGCTGTAGTTCACGGGGTTGCAAAGAGTTGAACAGGACCAAAGCATCTAAACACAAACAATGTTTTTGTATTGGTTTGGAATTTTTGAGATATGTTAACTGGTTCTTCTGAGTGTACTTAATGATCAGTTTTCATTTGGATATTTTTAGAACTATTCAATAAATAGAAGATATCCAATTAAGTATCCTTTTTCTATGCAGAAGTTCCTTGGAGTTCAAGGAGTGCTGCTTTGCAAACTCAGAGTATTTATAAAAGCTAATTGCAGAAGGTATTGCCAGCCTAAACTATTTCCTTCATGTATATTGTTGTTTCTCAGACCTGAAATACTTATAAATCAGTGCCCAGCAGCTAAGTTCCTTTGCAACAGTTCAGATGCTCATTGCTTTAAACTGAAGTGGAAAAACAACTTTCAGGTGTGATGAGGAAAATTTTCAGAATATTAATCATATCAAATATACAAATAAGCTTTTGAGAAAGTGAAAGATGATTAAGATAGCATCAAGAAATACATACTTCTTTTATCAAGCATTTTTATATTTAATTCTAATATGCTTTGTAGTGGGTGTTTACATTTACAGATGAGAAAAAGGGAAATCTGGGAACCCTAGGAAATATATTTGGTATATGGGAACAGATAATGTAAGTATCAGGACTTATGTGATACATTTTGAATTCAGGTTGTTATATACACTTATCCTTCACAGTTTTCTAGTTACAATGAAGCCTGAGGCACTTGGTTTAGTTCCACATCAAGATCTCTCTTTGGAAGAATTCCAGTCATCAAAAGTTTCATTTTCTCTTTAACTTTTATCATGGAAAATTTCAAACATACTCAAGATTCAAAGAATAACATCAGTACATCACCCATCTTTGGTGACTACCCCTTTAGTAATTTCTGTGGAGCTCTGTAGAAATTGGAACTTCACCATTGACTTGCTATGCCTCTTGAGATGTTTTTCAGTTGTAAAATGATTGTCTCATAAGCACTCTATATCAGAATTGTT TCONS_00170170 s 5' 0 TCONS_00170170 s 5' 0 EMBV3_03998 ACAGCTTCCGGCTCCAAAGTCATTTCTCAGCATTGAGGGAAGAAACAGGAAGGAGTGCTC Gene BVT0102_030497 + 0 NULL GK000008.2:10919925-10991169 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224402 TCONS_00224398 TCONS_00224403 TCONS_00224406 TCONS_00224410 TCONS_00224405 TCONS_00224407 TCONS_00224401 TCONS_00224399 TCONS_00224408 TCONS_00224411 TCONS_00224409 1 XLOC_137525 Coding TCONS_00224409 XLOC_137525 Coding Coding CCDC25 8:10901730-10923336 j TSS168290 3969 1 TCONS_00224409_1 140 6 0.816570238370747 0.000268390100700545 0.000338481529711138 0.000654348799103592 0.000343419065970387 0.000118358087066908 4.23947097348521e-05 0.000237939054837648 0.000416599954902069 3.90086891200824e-08 2.04297119710063e-07 7.82814603512538e-11 5.49049153784655e-05 1.07873887366979e-05 4.41197422308229e-07 0.00040724760957239 1.18631096776381e-05 0.00157565060466236 0.000715557336108821 0.000333856016408802 0.000406948368757844 0.000322422956093476 0.00142057195385815 8.8477940152968e-12 0.000161574141955676 6.69179062595021e-05 6.1864355472783e-05 0.000331747587853052 4.19567617582254e-07 0.000207681541915639 0.000476193882375662 NM_001035044.1 CCDC25 Bos taurus coiled-coil domain containing 25 (CCDC25), mRNA. 0.0 989 99.82 0.139077853363568 NM_018246.2 CCDC25 Homo sapiens coiled-coil domain containing 25 (CCDC25), mRNA. 0.0 994 76.15 0.348450491307634 TCONS_00224409_1 sp|Q3SZX8|CCD25_BOVIN CCD25_BOVIN Coiled-coil domain-containing protein 25; 7e-99 287 100.00 0.992857142857143 0 coding 0 0 0 0 0.0193478683709075 0.867790156220895 -0.00559404249364349 0.903360932481557 GTTCAGGGAGAGAAAATAGAAGATATTCCAAAGGAGGTGCTGATGGACTGTGCCCATCTTGTGAAGGCCAATAGCATTCAAGGCTGCAAGATGAACAATGTGAACGTGGTGTACACCCCGTGGTCAAACCTGAAGAAGACGGCCGACATGGACGTGGGCCAGATTGGCTTTCACAGGCAGAAGGATGTGAAAATTGTGACAGTAGAGAAGAAAGTGAATGAGATCCTGAACCGATTAGAAAAGACCAAAATGGAGCGGTTCCCAGACCTAGAGGCAGAGAAGGAATGCAGAGACCATGAGGAGAGAAATGAGAAGAAAGCCCAGATTCAGGAAATGAAAAGGAGAGAAAAGGAAGAGATGAAAAAGAAGAGGGAGATGGACGAACTTAGGAGCTATTCATCACTAATGAAAGTTGAGAATATGTCTTCAAATCAGGATGGCAATGATTCAGACGAATTCATGTGAATGGAGGAAAGGACCTTTTAAAGATGTGAATTTGGGGCAGTGTGCAGAAGTTTTCATCTATGTTCTGAGTCATAAAAAAACAACCAACCAAAATTCTGCCTTCATAATATTCTACAAATATTACCAACTTTGGAGTTTAAAAAAAGTGTTCCCTTTTTTGCTGTCAGCAAAGGATCAGATGAGTGTATATGTGTATATAAATGTGTATACAGTATAGTTGGACTTCAGTAGAGCATATCACTTTAGGAAAGTGAAAATATTTTTGCCAGAACATGCCTTGGAACCTCACGAAAGTTGGCCGCCCCTGTTCTTGGAATAGACTCTAGAACGAACCAACTCTGGAAAGTATTTCTATTACTGCAGTCTGTCCTGAAAACAGATGTCTTGAAAAGCTCCTCATATTCTTAAAATAGTCTCAGTTCTGTTAAGAAGAACGTATTGATAAGCAATATAAGTGAATGTTCCTCTCACCCCTGACTTCCTGGTTAAGGAAAAAAAAAAGATATGGGTTTTGAAAGTGATAGTGATATTTTCAGAAGATAACTGGCTTCCCTGGTCATGTCCCATTGTGCCATCTGAGTTTGTTAATGGATCTGCCCTCATCTCTCAGCTTCTCCAAGCTTCCACCTGCTATATCCTTCCTTTTCCCATTGACAGCCTCCACCCAGGCACCATCAGACTTAAGAAAAAGAATAGTCGATGTTAATCAGATTTAGGCCTTATGGCAGTTTTTACCTGAGCCCCAAGTTGTATATTACAGCTTCCGGCTCCAAAGTCATTTCTCAGCATTGAGGGAAGAAACAGGAAGGAGTGCTCTGTGAATTCCTTTGAAGATGTAGGTTACCTGGTTTCTGTCTTGGGATGTAGCATAAAGCCCAAGTCTACTTGGCAGTTACGGTTTAGAAAGACTAAAGCATGTCACTTGCCAGCCGAGTAGTTTGTTATTTACTTTGAAATAATATTTATTTTGAGTGGTAATCCCGGAGCTCAGATTCCTCAGTTGTAGACTCAGTAACTTAATAGGTAACAGTCCTGCTCATCTGAACCACCTGTCTTCCAGGGTGACTCTGAATAGAAGAGAGATCTCTGTGACAACCTGTAAAGAAACCGCTATGGAAAGAGACAAAACAATGAAAAGGAAAGACACAAAGTCTGTGGGTCAGAAGGCAGAGAGGTTCACACTTTAACCCCACCCAGAAGTCTTAAGCTCTGTTCCAACCCAGCAAAAGCTCCTCCTCCAACAGATACTCCACCTGTAATAGTGGAATAGAAACAAGACTTATTTCTGTTTATCCCAAGTTGGTGTGTGGGGTTGAACTGGAAAACGTCTTGGGCCAAATTCTGAGAGGGTGCAGAAGATGAACGCATAGATTAGTGATTATCTCTGTATATATGTCTCATGACAGCCTGGAACTCTGTGAGTTGGAAATGTAACAATAAAGACTCATTTTTATTTGGGAGGACAGTAATCTATAACTTCTTAGAATTTGCTCGTTAGTTCCCTCCCTAAGCTGGTTCTTAGGGTAATCAGGCTGTGAAACCCTTCTCTGTCACGTGGGCTTAATCTGACAGGTTCTCCAGGGGTGATCTTCCTCCTTCACTGACAGATGTGTCTGTCCCAGATGCCCGTGGGGGCCAGAGTGGACGACCTTTCTCAGGCACCTTCTTGATTCAGTGTAAATCAGCAACTGTGCTTCTTCAATCAGATAGCCCTCCCACCTGGTGACTGTAAATGAAGTGCTGCAGCTGTCTAGAGTGGGGAGACTGCCTCTGGCATTGCCTGTGTAACCTCATCTCTCTGCCCCATGTTACAGCATATACAGGAAGAACTTTGGAAGAATACATCTATTTTTACTGTAGTGTGAGAGATCCTGGGGTCCACATGGTAAACTCTTAGCTGACACTGGTTTCAAATCCCTGGCCCTCGACCCTTTCTAGCTGCTCTTTGCTGATTGCCCCTCTTCCCCCTCTTTCTGTGCGATGGGCAGGGTTTTTGACCAGCTCCCATGGCCCCAGAGGAAGCATCCTCTTTTTCTTCTGAGAACATTGGCTCAGTGCCAACAGGTCAAACTGTTGGCATTGAAGTCATCTCATTTCTGGCTATTGGCATGTTCCCTCAGCTTTTTATAGGAAAATTCCAGACTGTTGGCATTTCTGTAAGCTGTGCCCTTGATCAAATCACACACCGTGAGCATTTCTCTTTTCCACTCCGCCTCCAGTCTCCCTACTCCGATCTGTGTGCAGGTGAGGGTCACATGATTATTTACTTAACAAACTGTCGTATTCCTGTAGCTTGAGAAGTTATTTCTTATCCACCTTTTTTGACCTGGAGTCACAATCTTTTGGGCAAGGGAAGTTTGTCACAGTGCATGGGATAGAACAGACTTCAGGGAGTTGACCAAAATAGGGAAGGTTTTGACCTTTGCAAAGTAGGCGCTTAGCTGTGGTGGATCCCCTTCAGTATCTGTTTTTGTTGCTGTGCTGTGTTGAACATTGTCTAAAGCCCAGATTTTGGTGAACCTTTGAACTGTTCCTTCCACTTGGGAAGGAAGGTGTGAGCCACACATGTAGCAAGATTAGAGAGGGAAGTAGGTTCTGGCCTCTTTTTTAAGACCAAAGCTGTTCCTCCCACATTTGTATCCATCAGAGACAGAAAGCTCTCGTCTTCCAGGCTGGAACAGGTTATGGGAAAAACTGAGCAGGATGGAGAAATGGAAAACACGTTCCAATTTTTGCTGACCTGTGGTCTTGAAAGCCTGCTTTTCTCTGTTTGATTTGAAGGACAGCGTTGTGAATAATAAATCCCACACTCAGAATGATCACAGTAGAGTGAGTGGGCAGCATCTTGATTCTGAAGTAGGCTGGGAAATAGTCCAGCTGTACTCAGCACGGTAAAATTAGAAACTTCAGTTCCAAGCTAAATGTCCATCTCGACCCATCTAACTCCAGGGAGTGTGTAAGAGCTGGGAAATGAGGACAGCACATCCGGTGCCCCAGCAGGCCACCGTTCAGGGTGGGCTTCGTGAGAGCCCTTTCCTGCCTGGTGCACGGGGGCCCAGCACAGGGCAAGTGACTTGTGTGCATCACGTCATTTCATGTTGAGTATGAACGATGCCACCCATGTACGTGTCGTGTTCTGGATGAATGACATGTAAAATAGAATAAAAGCTTATAGTTTGAGAAGAACCAAGTGTGCGTTTGGGCTTTCACTTTCCTTTCCTCCTCCATGACGCAGTCTCATTGATGGGCTGTGTGTACTTTAGACAAGTAGGTTCTTGGCTACGTGGGATGATGCCCTTCGAACAGTCAGTTTTGCTCTTTAGCAGGAAGAAGAGAACAATGTAGAGCAAAGGGGAGATGCCCAGGGATTTCAGGAAGAGAACTGAAGACCTCGTAGTCTCGGGGCTGTGATCTCCGTGCACCAGAATGTGAAGTCTACAACTCAGTTCCCCACCCCTCTAGAGTTCCTAGGGGTCTGCCTGAGACCCGGACCCCTGGATGAGG EMBV3_25457 GTGGTCGCTGTCTTCCCGGCTCTTGCGCGGAAGCAAAACCAGCCCCAGAAATATTTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21983 GTTCTTTACATGTCTTTGGGCAGATATGTGTGCTGTCTAGGGCAAGAGGGATCAGGGCTC Gene BVT0102_141643 + 0 NULL GK000002.2:85387384-85640649 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38326 ATGTACATGGAGTCCGAGGGAGGCGACGGGTATCTCGCTCCGGAGAACGGGTATCTGATG Gene GeneID:535113|SNRNP70:NM_001076046:325_cdna Constitutive 0 NULL GeneID:535113 18 GENE SNRNP70 MGC138058 SNRP70 small nuclear ribonucleoprotein 70kDa (U1) EMBV3_10142 GGAGACACGGAGACTCAAAAAAGATGAATTATTTGGCTGTACTCGATGGCAGAAACCAGA Gene BVV0102_459773 - 1 EMBV3_20279 GK000020.2:8369977-8419595 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38792 GGAAAAATACTGATTCTGTGAAAATACCCCCTTTTCTCCATTAGTGGCATGCTCATCAGC Gene GeneID:100297368|LOC100297368:XM_002699598:108_cdna Constitutive 0 NULL GeneID:100297368 X GENE LOC100297368 NULL similar to SMT3 supressor of mif two 3 homolog 2 EMBV3_07700 GGTGAGACGCCAGAATGTCCTAGCCAGCATCCAGACACTTTGGACGATCATCTTGAACCT Gene GeneID:505234|FGD4:XM_002687709:139_cdna Constitutive 0 NULL GeneID:505234 5 GENE FGD4 NULL FYVE, RhoGEF and PH domain containing 4 EMBV3_41857 GTGGATGTCTCAGTAAGGAAGGGGCATAAGGACCGGCTCAGGAGACCAAAACAGCTATTA Gene GeneID:509102|PIPOX:NM_001014878:82_cdna Constitutive 2 NULL GeneID:509102 19 GENE PIPOX MGC137271 pipecolic acid oxidase EMBV3_39119 TGGAGAAGTACCCTTCTGCTGAGGCTGCAAGGACCGCAGACTGGAGAGATGTTTCAGAAT Gene GeneID:511463|MBD4:NM_001034405:107_cdna Constitutive 0 NULL GeneID:511463 22 GENE MBD4 MGC128668 methyl-CpG binding domain protein 4 EMBV3_05026 GGGGACACCCAAGAACTCAACGAAGGGAATGAAAAATGAAAACCATGTGCGCTTTGGCTG Gene GeneID:615452|TBC1D19:NM_001076938:204_cdna UTR3_Alt 2 NULL GeneID:615452 6 GENE TBC1D19 MGC143093 TBC1 domain family, member 19 EMBV3_29655 TTCTATAGCACAGTGTTGAGTGAAGTCAGTGGGGGTGTTGGATAGCAGGTGTCCCCAAGT Gene BVT0102_038388 + 0 NULL GK000011.2:4456736-4502860 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026744 TCONS_00023829 TCONS_00023831 TCONS_00026745 TCONS_00023832 TCONS_00023827 TCONS_00023828 TCONS_00026746 TCONS_00023830 TCONS_00026748 TCONS_00026747 2 XLOC_015101 XLOC_014369 Coding TCONS_00023832 XLOC_014369 Coding Coding EIF5B 11:4425371-4503244 = TSS17638 5751 1 TCONS_00023832_7 761 24 0.926456235874255 0.0167132748550396 0.0119690315959421 0.00977032016801464 0.0104257301106244 0.00906689588357681 0.00464733146438715 0.00725407562500126 0.0107713808254563 0.0101984213896332 0.00303886510435264 0.00106138924920686 0.0012189607629252 0.00152646292320999 0.00379589362169552 0.00321089099202898 0.0102425238790729 0.00271563362879579 0.00538974635670579 0.00880602287930904 0.0126518366925333 0.00708102919245799 0.00490480727417525 0.00429200045213608 0.00444241919424253 0.0270747700776507 0.0183194367750422 0.00991216845337412 0.00127843858709301 0.000831665194980938 0.0020859128414532 XM_003586607.2 EIF5B PREDICTED: Bos taurus eukaryotic translation initiation factor 5B (EIF5B), mRNA. 0.0 9294 99.98 0.896539732220483 NM_015904.3 EIF5B Homo sapiens eukaryotic translation initiation factor 5B (EIF5B), 0.0 5856 89.45 0.765605981568423 TCONS_00023832_7 sp|O60841|IF2P_HUMAN IF2P_HUMAN Eukaryotic translation initiation factor 5B; 0.0 1356 95.91 0.993429697766097 5 coding 1 1 1 1 0.0750722070827191 0.705958446734786 -0.00405385676358216 0.947784594766523 CTCACACCATATGTGCCCTGTCCCAGTGCGCGGGTCTGTGGAGAGCCGGGTGCGAGAGGAGGCAGCGCGAGGGGCACGGAGCCGAGCGGAGACCGAAGTCAGCCGAGGGACAGCGGGTCTGTGAGAGACCAAGTAGAGGGGCTGGGGCTGCGAGCGCCGCTGACACACGATGGGGAAGAAGCAGAAAAACAAGAACGAAGACAGTGCCAAGGATGACATTGATCTTGATGCCTTGGCTGCAGAAATAGAAGGAGCTGGTGCTGCCAGGGAGCAAGAACCTCAAAAGGCAAAGGGGAAAAAGAAAAAGGAGAAAAAAAGACAAGACTTTGATGAAGATGATATCCTGAAAGAACTGGAAGAATTGTCTTGGGAAGCTCAAGGCATCAAAGCTGACAGAGAGCCTGCTGCGGTCAAGCCAACAGAAAATAATGAAGATGAACCCATCTCAAAACAAGATAAGAAAAAGAAAGGACAGAAAGGCAAAAAACAGAGTTTTGAAGATAATGATAGTGAAGAATTGGAAGAAAAAGATTCAAAGTCAAAAAAGACTGCAAAACCCAAAGTGGAAATGTACTCTGGGAGTGATGATGATGATGATTTTAATAAACTATCCAAAAAAGCAAAGGGGAAAGCTCAGAAATCAAATAAGAAGCGTGATGCATCAGAAGAGGATGAGGATAACAGTAAAAGAATTAAAGAGCGTATGAGAGCACATTCTTCTGGTGAAAGTGGTGATGAATCAGATGAATTTTTGCAATCCAGGAAAGGACAGAAAAAAAATCAGAAAAACAAGCCAGGTCCTACTGTCGAGAGTGGAAATGAAGATGATGACTCGTCCTTCAAAATTAAGACAGTGGCTCAAAAGAAAGCAGAGAAGAAAGAGCGTGAGAGAAAAAAACGGGATGAAGAAAAGGCAAAACTTCGGAAGCTGAAAGAAAAAGAAGAGCTGGAGTCTGGTAAAAAGGATCTGGGTAAACCAAAAGAATCTCAGCGGAAACCTGAGGAGGAAGCTCTGAAATCCAAAGTGACACTTGACTCTGGGGCAGCTCCTGCCTCTGAAGAGAAAGGAGAGGGTCCCATAGGCGCAGAAGATGACAATGAAGGAGACAAAAAGAAAAAAGATAAGAAGAAAAAGAAAGGAGAAAAGGAAGAAAAGGAGAAAGAAAAGAAGAAAGGACCTAGCAAAGCCACAGTTAAGGCTATGCAAGAAGCTCTGGCTAAGCTTAAAGAAGAGGAGGAAAGACAGAAGAGAGAGGAGGAAGAACGGATAAAACGGCTTGAAGAGTTAGAAGCCAAGCGTAAAGAAGAGGAAAGATTGGAACAAGAAAAAAGAGAAAGGAAAAAGCAAAAAGAAAAGGAAAGGAAAGAACGCTTGAAAAAAGAGGGGAAACTTTTAACTAAATCCCAGAGAGAAGCCAGAGCCAGAGCCGAAGCTACCCTTAAACTTCTACAAGCTCAGGGTGTTGAAGTGCCATCAAAAGACTCTTTGCCAAAGAAGAGGCCAATTTATGAAGATAAAAAGAAGAAAAACCACCGCAGCAGATGGAAAATAAAGTTTCTGAACCAGTGGAATTAAGTGCTGCTGCAGAAGTTGTGGAGCAAGGACTACCCGAAAAAGAAGAGACACCGCCTCCTGTTGAACCAGAAGAGGAAGAAGAAACCGAGGATGCTGGGTTGGATGACTGGGAAGCTATGGCTAGCGATGAGGAGAGAGAGACAGAAGAAAACACGGTGCATATAGAAGTAAAAGAAAACCCTGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAAGAGAGTGAAGACGAAGAGGAGGAAGAAGGAGACAGTGAAGGCAGTGAAGGTGAAGATGATGATGAAAAGGTGTCAGATGAGAAGGACGCTGGGAAAACATTGGATAAAAAGCCAAGCAAAGACGTGAGCTCAGAATCTGAGGATGACTCTGACGACGATCGAACTAAAGAAGAACGGGCTTATGACAAAGCAAAACGGAGGATTGAGAAACGGCGACTTGAACACAGTAAAAATGTAAATACAGAGAAGCTGAGAGCTCCTGTTATTTGTGTACTTGGACATGTGGATACAGGGAAGACAAAAATTCTAGATAAGCTCCGTCACACACATGTACAAGATGGTGAAGCAGGTGGTATCACACAGCAAATTGGTGCCACCAATGTCCCTCTTGAAGCTATTAATGAACAAACTAAGATGATTAAAAATTTTGATCGAGAGAACGTACGGATTCCAGGAATGCTGATTATTGACACTCCGGGGCATGAGTCTTTCAGTAATCTGAGAAACAGAGGAAGCTCTCTTTGTGACATTGCCATTTTAGTTGTTGATATTATGCATGGTTTGGAGCCCCAGACAATTGAATCTATCAACCTTTTGAAATCTAAAAAATGTCCCTTCATTGTTGCCCTCAATAAGATTGATAGGTTGTATGATTGGAAAAAGAGCCCTGACTCTGACGTGGCCGCTACTCTGAAGAAGCAGAAGAAGAACACCAGAGATGAATTTGAGGAGCGGGCCAAGGCGATCATTGTGGAATTTGCACAGCAGGGGCTGAATGCAGCTTTGTTCTATGAGAATAAGGATCCCCGCACTTTTGTGTCCTTGGTACCTACCTCTGCACACACTGGCGATGGCATGGGAAGTCTGATCTGCCTTCTTGTTGAGTTGACTCAGACCATGTTGAGTAAGAGGCTTGCCCAGTGTGAGGAGCTGAGAGCCCAGGTGATGGAGGTTAAGGCTCTCCCGGGAATGGGCACGACTATTGATGTAATACTGATCAACGGGCGTCTGAAGGAAGGAGACACGATTATTGTTCCCGGAGTAGAAGGGCCTATCGTCACGCAGATCCGAGGCCTCCTGTTACCTCCCCCTATGAAGGAGTTAAGAGTGAAGAACCAATATGAGAAGCATAAAGAGGTAGAAGCAGCTCAGGGGGTAAAGATTCTTGGAAAGGACCTGGAAAAAACATTGGCTGGTTTACCCCTCCTCGTGGCTTATAAAGAAGATGAAGTCCCAGTTCTTAAAGATGAGCTGATCCACGAGTTAAAGCAGACACTGAACGCTATCAAATTAGAAGAGAAAGGCGTCTACGTCCAGGCCTCGACCCTGGGATCTCTGGAAGCTCTCCTTGAATTTCTGAAGACATCAGAAGTGCCCTACGCAGGGATCAACATTGGGCCCGTCCACAAAAAAGACGTCATGAAGGCTTCGGTGATGCTGGAACACGACCCTCAGTATGCAGTGATTTTGGCCTTCGATGTGAGAATTGAACGGGATGCCCAAGAAATGGCTGATAGTTTAGGAGTTAGAATTTTTAGTGCAGAAATTATTTATCATTTATTTGATGCCTTTACGAAATACAGACAAGACTACAAGAAACAGAAACAAGAAGAATTTAAGCACATAGCAGTATTCCCCTGCAAGATAAAGATCCTCCCTCAGTTTATCTTCAATTCTCGGGATCCGATAGTGATGGGCGTGACTGTGGAAGCAGGGCAGGTGAAGCAGGGGACACCCATGTGCGTGCCCAGCAAAAATTTTGTTGACATTGGAATAGTAACAAGTATTGAAGTAAACCATAAACAAGTGGATGTTGCGAAAAAAGGCCAAGAAGTCTGTGTCAAAATAGAACCCATCCCAGGTGAATCTCCCAAAATGTATGGACGCCATTTTGAAGCTACAGACATTCTCGTCAGTAAGATCAGCCGGCAGTCCATCGATGCTCTCAAAGACTGGTTCAGAGACGAGATGCAGAAGAGTGACTGGCAGCTTATTGTGGAGCTGAAGAAAGTGTTTGAAATCATCTAATTTTTCCACCGGGGGCAGAAATTGGAGTCAATGCAATATTATGTGGTAATATCACCAAGAAAAACAAGGAATGGACCTGTCTGAACACTGATTGACCTTAAGTATAGAAGGAAAAAACTAGGTGTATAAAATGTTTTCCATGAGAAACCAAGAAACTACACTGGTTTGACAGTGGTCGATACACGTCCCCACAGCTCCGACGTGCCTGTTCACTCGCCCACGCCCTCCCCTACTGGCTGCTGTTTTAAAGTTTGCCCTTCCTTCCCCAAATTTGGATTTTTATTACAGATCTAAAGCTCTTTCAATTTTATACTGATTAAATCAGTACTGCAGTATTTGATTAACCAAGCTTCTGCAGATTTTGTGATTCTTGGGACTTTTTTGAGGTAAGAAACACATCTTTATTTATTCATTTCCTTCCCAGTGATTCTTCTCCCAGCATTCTTCTGCCATATGCCCTTAGGAATTTTTTAAAATAGAAAATTTCGGCTGTCTTGATATTTCTTTATCTGCTTTGTGTGAAACCATGGTGTCGAGCATCGCCGGCTGCCCTTCACCGCTTGTGTGGTCATGAGTGTCCACAGTTCTCAGCACCATCCTCAGTTCTAATAAAGAACCCAGACGCGGCCCGCAAGCGCCGCTGGGCTTCCCTTCCTGTCCGCAGAGCTGCTCTCCAAGCCTCCTCCCGGTACAGCACATTCTCTCGAGGACAGGAACCGTCCGGTCACCTTGGGTCCTAGCACACGTCGCAGCAGGGTTTTTACACATCAGTTTGCGTCTGTTTGTCCTGGCAGGTTCTATCGTGCATATATTTTCTGACGAGACAATCAGCAGGGTGTTGATTAACTGTCTGGACTTAGTATTTCTTTCTAAGTTGTTACAGAGGCATAACAGTTTCGTCATATTGGTAATTTGGTGGTAGCTAGTTCCCTAAGGTTTTCCTGAAGACTATGGGAAGTGGGTCCCTGAGAGCAGCAGTCTGTTAGCATCAGACTAGTACCTGCCTACCTTCTATAGCACAGTGTTGAGTGAAGTCAGTGGGGGTGTTGGATAGCAGGTGTCCCCAAGTATTCACTGGCATAGAGTTATAAACTATATTTTTAAAGTCATATAGCATAGACGAATACTTTTATATACATTTGGAAATCTGTACCATTCTTCATTATTTCTGAAGTTTCTCAAGGGCCAGTAGAGGCAAAGACAAAACCTCTCAACCATCTGGGGACACAATTTTCCCAGGAAAAACTCGGTCTTCATTGTGTGTGTGTTCTAATTCAAAATATGTGAATTCCTCCACTCGGAAGAAGTAAAGAAGACTTTGTTAACATGTTCCTGTGTCGGTGCTTTGGGTTAGGAGTGAGTGAGTGCACGCTTGCTTTACCCTTGCTTGGCTGGCACAAGTACACACCAGTCAGGGCTCTCAGGAATGTCAGCGCTTAGCACGGAGCCTGTAACCGGCCAGCTTGGAGGGTTTTCAGCCTCTTTAAGTAGAATAGTTCAGGATTTGCTTCCTAAAGGATTCACAAAAAGGAGCCTGTACAAAATATACATACAGTTCTTTATTAAACAACTGTAAACACTTCACTGTAAAAATCCATAAAACTTTATAAACAAACATTTTGTAAATAGAATCTATGCTACAGTAAAAGAACACAATTATTTACATGCAATACTGACAAATTTGGCACTTACTGAAAAGAAATGTACAAAACACTTTGCTTAAAAAGAAATTTAAAATTATAAAACTCAGAGCATTACTATCATGCACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTAGCGGAGAGCGCCAGGCTCCCTGGTAATTCATCTTCATGTGACTTTTAATGTGCTTCCGTACGTTTGCTGTAAAACCACCTGAACATTGTCGAGAATAAAGTCAAATGCCATATTCCAAA EMBV3_42706 AAGACCCTGGCTCAGCAGACAGGCCGGAGGCCAGAGCTGGTGGAGCGCCTGATTGCCGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19693 TGGAAGGGCACCCATCTAGGCACCTTGAGACACTAGGTTTGGTTCAGCCATTCCAGTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32459 ACACACTGTTTTTGCTTTTGTATGTTCAAACTCTGATATTGCTTTGTGTTTTTGTGCCAT Gene GeneID:529894|ZNF451:XM_002697168:188_cdna Constitutive 0 NULL GeneID:529894 23 GENE ZNF451 NULL zinc finger protein 451 EMBV3_27496 CCTGGTACAGCCCAGCCAGGCAGATGCCCGGCCCTGAGGACTGTCCTGCACAGCCTGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04095 GGGCGTTTCCATCTTGTGAGTTCCAGCCCTGTCTTCTCCAGGCTTCCAGGTTCCCTTTTT Gene GeneID:100138522|LOC100138522:XM_002687045:145_cdna Constitutive 1 NULL GeneID:100138522 4 GENE LOC100138522 NULL hypothetical protein LOC100138522 EMBV3_39951 CGAGGGCAGGATTGAGTGCCCTTGGAGGAATAGAGGATGAGAGTTGGAATGTTCCTTAAT Gene BVV0101_084820 + 0 NULL GK000019.2:37679356-37725117 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099966 1 XLOC_060209 NonCoding TCONS_00099966 XLOC_060209 NonCoding NonCoding - 19:37720952-37721074 - TSS74342 122 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000707354436785328 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 TGGAAGGGGAATATGGGAACTGGGAAGTGCCCGGATGCTGTGGGACGAGGGCAGGATTGAGTGCCCTTGGAGGAATAGAGGATGAGAGTTGGAATGTTCCTTAATGTTCTTGCATGACATAG TCONS_00096668 TCONS_00096669 TCONS_00096670 . 3' 4044 TCONS_00096668 TCONS_00096669 TCONS_00096670 . 3' 4165 EMBV3_26829 GGGCCCATACTTCTCTGCATACTCGTGGTCGCTTCCAATATTTACAGTGCCATGCTAGTG Gene GeneID:521172|LOC521172:XM_002689911:22_cdna Constitutive 0 NULL GeneID:521172 8 GENE LOC521172 NULL similar to CG2698 CG2698-PA EMBV3_39351 TGAGCAGCAGTTCAAGTGTGTGTGGTGCGGTGAGCGTTTCCTGGACGTGGCCCTGCTGCA Gene GeneID:618783|ZNF319:XM_002694797:629_cdna Constitutive 0 NULL GeneID:618783 18 GENE ZNF319 NULL zinc finger protein 319 EMBV3_37711 CTGACACCTCACTTTGGTTCATCTGGGTAGCTCCTTCCTTTCCCACCAGGAGTCCATCTT Gene GeneID:515024|STRADA:NM_001015603:245_cdna Constitutive 0 NULL GeneID:515024 19 GENE STRADA LYK5 STE20-related kinase adaptor alpha EMBV3_08181 TAAGGGTCCACCAGAAAAACAGCTCGGGTTCTTAATTAGAGGGCAGGTCATTAGCTGAGG Gene BVT0102_170507 + 0 NULL GK000015.2:66264926-66454412 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26454 CTAAAGTCTGACAACTTCTGTTCCAAAAACAGAGTCCTGATGGGCGGCAGCCTCTCTCGA Gene BVV0102_051967 - 0 NULL GK000027.2:12938955-13134164 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35492 AGAGAACACAGCTCAGGAGCAATCACGGGACTTTGCAGATTTACAACTGGGAGCCACAGA Gene BVT0102_043394 + 1 EMBV3_28772 GK000015.2:6947619-7021659 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058312 1 XLOC_036065 NonCoding TCONS_00058312 XLOC_036065 NonCoding NonCoding LOC787564 15:6995589-7032186 x TSS43961 1847 2 TCONS_00058312_2 66 0.644829453167298 3 0.949611979451306 1.14589391476336e-05 0.000201295130533004 4.00822983194646e-05 8.99204902578739e-06 5.34615810558935e-05 0.000123947943485515 0 3.20233412435187e-06 0.000170874581337903 0 0 0 8.59874853553986e-12 2.54683017707936e-06 0 1.09524595448271e-10 0 0 0.000500838445406228 3.54815882800167e-05 0.000128201155424563 0 0 0 0.000274958559508906 0.00023268818153728 0.000431426142655065 0 0 2.59902766391128e-25 NM_024947.3 PHC3 Homo sapiens polyhomeotic homolog 3 (Drosophila) (PHC3), mRNA. 1e-08 66.2 73.68 0.0590146182999459 0 noncoding 0 0 0 0 -0.0615765177239927 0.724260808494973 -0.0174212849904981 0.730945541861842 CCACAAAAACCAATCACTCCCACACCTCAGGGCCACTCTCACTTTCCAAGACCCTGACTGCGTGCCCAGAGTGCAAGTCTGGCTTTCGAGATGGCCCATGCTCTGTCTTTGAATGCGTATCTCCCTGAATAAAACTGCTTTTACTTCCTTAAGGCTCGCTCTTGAGTTCTTTGCTGTTCAAAGCCAAGGACCCTGACTTGGTGGCCTGATGGAGGGGCTCACCTAAGACTTGGGACACGATCATCCTTTTTTGCCTCATTTCTCCTACAACAGTAAGCCCCTACTGAAGCTTTTCTACCACAGCCCAATGAATAGCCCTCAGAGTTGTCCCCGTTTCCTCTCCTGGCTGCTAGGCAGATAACTGTTATTACATCCCAACACAATACAGCTGGGAAGTGCTGGACCTGAGGGTCTGCAAAGCAGCATCTGGTGAGAGGTACCAGCATCACCAAGAACTTCAGTGCTGGCTCCTCTCTGTAGTTTGGGGCTGGTGGTAGGACAGTGAGCACAGAATTGGGGGTGTGTTGAGCCTCAATACTGGGGTACATCCACCTAGATGTCCCCATCCCACGTTTCAGGGCTCGGACCTTAGTGTAACAGAGTGTTTAATCATCTCTGTGGCTCCCAGTTGTAAATCTGCAAAGTCCCGTGATTGCTCCTGAGCTGTGTTCTCTGCCACTGCAGGGAGATAAGGATGGCTTTGTAAGAAGTACCACCACAAGCATACACTGGCTCTCATACTTAGCCTTGAACTTCTCATTAGCTGCCTTCAGTTTCTAGTTATCCCTCTGAAGGGCTTCCATTCACTTGTAAAGACTAGCCCTTGTCTTTGCAGGCGCTGGCTCTCGTGTCTTTAAAGGCCTCATTCATTGCATAGGTAAGCTTGATTTTCTGCACTGGGTATGTTTCCTCAGGCCATCATCTGTGAAATAGTCAGCAGCTGAGACACCACCTTGTGCCAGGGACGATTTGCGGCCCACATCCCACTGAGGTTGGGGTTTTCCTTGCCGGCCAGTGAGCAATCCACTCTCTGCCCTAGAGGCTGCCTTCTCAGACCATTTGCTAGTACCAACTGTTCAGTTCAGTTCCTCTGAAAAGCAGATACTGTGACGGAGTGGAGATGTACAAGGTTTTATTAGGAGGAAACACCTGTGAAGGATAAAGTGAACAAGAGCAGGTGTTAGCTAGGAAACTTTTGACATTATGACATGGGTCTGACAACTGAAAAAGGAGAGCAGGAAGGAAGCAGCAGCTCAGAGAGTATTGACCAGGCTGGTGAGTCAGCTGTGAGGAGTCCCCGCTGGCCAGAATGGTCCTCCTCAAGTCCACTCACTATCAGTCACGACTAAGATATTTGAACATTATCATCACTTTGGAGAAATCCTGGAATACCTCAGATGCTCTGGGGATTGCATTCTCTTCCCTGCTCACAGAGGACATCTGGCTACGTCTGAAGACACTTATCATGATGGGGACATTCTATGATTTTCGAAGCCAGAGATACTGCTAAGCATGGTACAAGGCACAGGAAAGCCCCCCACAACAAATGATTATCAACCAAAAATGTCTGTAGTGACAAGGTTGAGAGACCTTGATAAATACATACATAGAAAATATTTTTATTATTGTTCACATCTAAATAGTTTGTAATTTCTATTATAGTTAATTTTTCAGAACATTGGTTTGTTTAAAAATGTTTTTCTTAATGGTTATTTTTTGTTACTCATGTTTGTGGTCAGAGGATGTGCATTACTCCAATCCTTTGAAATGTGTCAATGTGTTTTATAGTATAATATTGGTTCCTTTTAATAAATGTTCTAAGTGTGCGCTTACAAAGAATGTGTCCC TCONS_00060527 r 5' 884 TCONS_00060527 r 3' 26070 EMBV3_41614 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19553 CCACGCATTTGGTGGAGAACTCGCTCATCCCTTTTATGACAGGACTAATGGCAAAGCCCA Gene GeneID:618141|ZNF3:NM_001046614:329_cdna UTR3_Alt 2 NULL GeneID:618141 25 GENE ZNF3 MGC128512 zinc finger protein 3 EMBV3_29699 CTTTCCCGCCCCTGCAGGACTGAGTTATGTCTGGTCAAGAGAAATCTTGAGGAAACTAGC Gene GeneID:540247|CMTM4:NM_001083749:387_cdna UTR3_Alt 2 NULL GeneID:540247 18 GENE CMTM4 MGC139432 CKLF-like MARVEL transmembrane domain containing 4 EMBV3_33772 TGTCTGGGCCAAGGAGTTTTGTGAGCCCTGGAGTGGGTAAAGTCATCAGTGTCACCAGTT Gene GeneID:505539|HMGXB4:NM_001101856:13_cdna Constitutive 0 NULL GeneID:505539 5 GENE HMGXB4 HMG2L1 MGC165903 HMG box domain containing 4 EMBV3_11770 AAACTCTGTGAGGTGGAAGAAGGAGATAAGACAATGGAGGCAATGAATGGTGGAAAACTA Variant GeneID:281615|ALDH1A1:NM_174239:11_cdna 189^329 1 EMBV3_06989 GeneID:281615 8 GENE ALDH1A1 ALDH1 MGC128391 aldehyde dehydrogenase 1 family, member A1 EMBV3_05295 GCATGCGAACATAAGACGGAGGTTAGTGCTTGTACCAAGGTTATCTTCTTGTCCATACGC Gene GeneID:512302|CDH13:NM_001035277:29_cdna Constitutive 0 NULL GeneID:512302 18 GENE CDH13 MGC128634 cadherin 13, H-cadherin (heart) EMBV3_16301 GAAATGGCACAATGGCACTAGGGAGCAAGCAGCCGGCCCAGGTTCACTTGCAAATTTATA Gene BVT0102_035613 + 0 NULL GK000011.2:97302290-97316656 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026028 TCONS_00026021 TCONS_00026025 TCONS_00026023 1 XLOC_014908 Coding TCONS_00026028 XLOC_014908 NonCoding Coding FAM125B 11:97193946-97305073 j TSS18773 3666 1 TCONS_00026028_9 260 5 0.967055414574447 2.08982384456726e-05 0.000218897727437172 0.000409949320675191 0.000210068487927663 0.000403655166905022 9.00502913103003e-06 4.5792437814359e-08 1.01069905469032e-09 2.69135052518379e-05 2.73852443066352e-73 1.55624286756547e-10 0 1.51486785845136e-13 3.52542953478138e-24 6.48419011613044e-26 1.98064207885659e-08 8.26139891701862e-05 4.24283184200982e-09 8.34371824256384e-23 0.000333536951868593 8.72929250428438e-06 1.31325426355313e-09 1.06158346470356e-05 1.52264867271727e-33 6.44158514915271e-08 4.47605738921252e-05 3.95844242564598e-08 3.46987954111417e-06 9.54008581807005e-23 1.37811970438919e-22 XM_002691585.3 MVB12B PREDICTED: Bos taurus multivesicular body subunit 12B (MVB12B), 0.0 6336 100.00 0.957992362247681 NM_033446.2 MVB12B Homo sapiens multivesicular body subunit 12B (MVB12B), transcript 2e-167 594 80.67 0.180851063829787 0 noncoding 0 0 0 0 0.0888425078450634 0.467762484445268 -0.000643434413121424 0.989838094611542 ACTTTTTGTGAGATAAAGAGCTCCACTACTCCAGTTAAGGCAGGAGGAGTGCCCTCTCCCCACCCAGAAGCTAGCCGGTCAGCACGAGAGCACAGTCACTGGGACCTGAAGCCAGGGGACGCAGGAACACAGGCCACGGAGAGTCTAAACTGGAGGCACATCTCTCTCACGCTCCCCGCTACCTTCCGAGGCAGGAACAGCACTCGGGCTGACTATGAATACCAGCACTCCAATCTCTATGCCATCTCAGCCATGGATGGTGTGCCTTTTATGATTTCAGAGAAGTTTTCTTGTGTTCCAGAAAGTATGCAGCCCTTTGATCTCCTGGGAATCACCATCAAATCTCTGGCAGAAATTGAAAAAGAGTACGAGTACAGCTTCCGCACGGAGCAGAGTGCCGCGGCCAGGCTCCCGCCCAGCCCCACCCGATGCCAGCAGATCCCCCAGTCCTGAGGGGCCGCCCACCCGCCCGCGGGGAGACGACACAGCGCCCGGACTACTGAGCGCCCCCTCGCCCGGCCCCTCCCGCCGCCCATCCACACTGCCCTGCTCGGCGCTCCTGGGAGACTCTGGGCAGCTGAGCTGTTGCCTCCTCAGTCATCGGTCATCAGCTTGCCCAACGTGACACCCCCTGCCTCCCTGGGGATGCTCTTCCTTAACCTCCACTAACCTGTGTGTGCTGTAGTGACCAGCGGCTCCTCCCGTATCTGTGTGATGCCCAGTAGTCCTCTGACCAACCCTACCCACCACGGGAGCCATCTGAGGGCCCTGGACAGTTGTCTGGCCGCCCAGTGATGCCACCGGCTCCCTGCCCTCCTGACTCTGCCACCATGAAGCCATCGCCTCCTCCCAGAAGACCCTGAGGGGCTGGTGGCCTGGCACAGGGCACCCACCCACCACCCCCCCTAGCACTGATGGGTTGCCCCGTGGAACAGATCTCTCACGCCAGGGGCCTCGAGTGCCCGAGAACTTCATGGGGACCCTAAGGAAACACGGAGGGGCGGCCGGTGATGCCCAAGTGGACCTGGGCCTAGCTCCCCTCTGACTCACCCCTCAGTTCACACACTGGACGCCCTGAGGACGGGGGCCGGCCATCCCACAGCCACCGGCCCAGAGAGGACTTGCCTGAGGCCGAGGCAGCCGAGGGGCTGGGTGCTTGCGTGGACATGAACTTTGCCGCCAGGTCCCCATGCCCAGCCTCCTCACCATCATCCCCACAAAGGGCTCATCTCTGCAGTGCTCACGTGCCAACAACAGCTCCAACTGCCTGTCCCCACGCCCCGACCATCATCACGTGGGTAAAGAGGCTCTGTGAGCCGGTGCCCAAGGACGTGGACACACAGTCACCAGACTGAAGCCAGAACTGACCCTTCTGCCACTAGTGCCAGTGACCACACCATCGTTCCCCAAGGTGCTGGCCACCCAGCCCAGCTCCCCACACGGGCACCGTGGGAACGGGGCTGCTGTCCTCCCTGGAGGCCCGGTCCTCATCCGGTGTCTGCTTTGTTTGGCCATGGGACTGTCCTAAACTCCCGGAACCTGGTATCTCACACCTTGGAGGTGGGGGGCAGGGGTCAGCAGATAGTTGGAGCATTGGACGTGAGCTTTGACACGTGTCTGGCGTAAGCAAGCAGCCCGGGAGAGGCCCTGCCCAGCTAGGAACAGAGCCCCTGCTCCCTGCAGTTCCTCGAATGACACCGGGGTGGCTGGGGTGCAGTCAAGAGGAGCAGCCTCTGGCTGAGACACAGGGCCAGGGCAAGACATACCTCAGTCAGCCGGCCTCAGCTCCGCCATCTCCAGACCCTCCGCCTCCCCCCGCAGCTGCCCCTGATCTTTCCCTTCCGATACCTCCTGATTCCTGTGTGTCACCGCTCCCCACTGTCCCCAAGACCTGAGGACATCCCTGGCAGGGCCGGCCTCCCCGGGAACCGCCAGGGCCCAGGAGGCACAGGTGGAAATTCCTCGGGCAGACCTTTGGGATGGGTGCTCGCCCAGGGCTGAGCCGATGACCTGGCCTCAGACATACGCACTGAAATGAGCTGGTTGTTCCTGGATCGGGGTGGGGAGCCCTGAAGGGCCCAGAGAGCCTGCGTCTGCTGCTGCTGCCAGGATGGCGGAGCTCGTCCAAAAGCAACAGCGGGGTGGCCCCTCTGCTCACCTCTGTCCGGCCGTGTCGGCTCCGTCCCTCAGTCTCTCCTCACACCCCGGCCGTGGGGTCGTCCCGCCAGGTAACAGCCGCGGCCTTTCCGCGGCCTTCCTCCACTGAGAAGCAAGCATTTCGGCTCCGTGGGCCCGAGGAGGTCCAGAGACAGTCACGTGAGATTTCCTGTCAGGGAGCAAGAGGGCCATGAGGGTGGCTGTTGGGGAAAGGGTCTCCCCTCCACCCCCCAACCAGGCCGGTAGAGGCAGGGTCCAGGGCCTCCAGGAGAGGGCCAGGCCTCCCCTAGCAGGCAGCCTCAGCGCGGGGTCTAGCGAGTGACTGTGGACGGCGCCGTGATGGCAGCTGGAGAGAATGGAGCAGCGACGGTGTTGGAGAAGCCGGCGTCCCCGGTGGGTCTTAGGCAGCTCCTGACCTCTGTCTCTTTCCTTCTGAGGGGGGCTGCTCACCCGCGTGGAGGTGAAGCTCGCTCACTGGGGACCAAGCCCCCTCTTCCCCCTTCCTTTCTGGGACGGTGCTTTTCTCCGCAAACCCTCTGGCCACGAGGGGCGGGGAGGCAGGGCTTCTCTCAGAAACACGAAGGGCAGTGACCTCCACCCTTCCCAGAAGGACTCCCCAGAGCACAGCGTCCCCCGCTGCCTCCTCCTCGTCCCCTGAAAATTCTAAGCCTGTCTGCACAGGCCTTGGAAATGGCACAATGGCACTAGGGAGCAAGCAGCCGGCCCAGGTTCACTTGCAAATTTATAACAAGGTTTTCCCCCACCCCCGAGTCCAGGAACTGACTCTGGCCACGACCTCCTCTCAGAGGGATGGTCAGGACGGCGGGGGACGGGAGGCGAGGGCCAACACGTCCGAAGCACCTACTCCTTGCCGGGCACACGGCCGGCACTTGAAGCACATTTTCTTCTGTCACTCCCACCCACCCCACCCCGCCAAAAAAAACACCACCAATACCCAGAAGCGGATGCTGGTTCCAGATGAAGATGCTGAGACGCGTCCACAGGCACAAAGCCGGCGCGCGGCAGAAGCGGCCCAGGCCCCGCTCTGTCCCGTCTCGAGCACCTGCCTCCCGTGCAGTAACGGGCCTGCGGGCGTGATGGTGTCTCACCGAGCACGGGGTGAGTGCCGGGTCCAGTCCCCAGGGCTGCGGGCTGCCCCTCACCGTGCACACGGATCCCAGCCCGCAGCTCCCTGGAGCCGGCCGGCGAGCCTGAAGGTGAGCCTGAAAGCCGAGCTCGCCTCCCGGGGCCTGGAGCGGCCGGCGCCCACTCTCACCGCAGCTGCCCGCCCCCCAAGGGCGGCTGGCCGTCCTCACCTGTTGGACCCTGCCGGCCCGGCCTGTCACCACCAGGAACCGGGCCCCGGGCGGGCGGCTGGCTGCGCTAGGTTAGGAACAGCGTTGTACTGCGTGTATTTATTTGAGGTGACTCTAGTACTTGGCAAAGGGAAGTTTCACTGTGTGATTGTCTTCTTAATATAATTTGTTAAATAAACGTTTGTTTTAACCT EMBV3_41580 ATCTTTTTGCTGTGTTGGGGATTTTCTTTTGGGAAAGGTGAGGGGAATCACAGGGCATGG Gene GeneID:540347|YIPF6:NM_001101206:74_cdna UTR3_Alt 2 NULL GeneID:540347 X GENE YIPF6 NULL Yip1 domain family, member 6 EMBV3_15423 TGGGAGGGACTGAAAGCACGAAATCTTCCATCACCTTTACAAAGAGAGCTCAGTGGACCC Gene GeneID:533330|PRKG2:NM_001144099:4_cdna Constitutive 0 NULL GeneID:533330 6 GENE PRKG2 NULL protein kinase, cGMP-dependent, type II EMBV3_16624 GAAAATAAAGAAGATTTGTCAGGGACTCAGAGGGGCCAGGGAGCTCCAGCTCGAGAGCCC Variant GeneID:535482|C1H21ORF59:NM_001046407:43_cdna 763^894 1 EMBV3_38895 GeneID:535482 1 GENE C1H21ORF59 MGC134342 chromosome 21 open reading frame 59 ortholog EMBV3_21029 GATCCCATCGTTAGGAGATGAAGAGGAATTCTTTGAGGATGAGGGCCAGGATGAGTCCAC Gene GeneID:100296459|LOC100296459:XM_002695450:103_cdna Constitutive 0 NULL GeneID:100296459 18 GENE LOC100296459 NULL hypothetical protein LOC100296459 EMBV3_06899 TGCCTCTCAGGGTAGTGAAGAGGAAGTGCTCCCAGTGAAGGAAGATGGTATGAGGTCTCA Gene GeneID:514534|WC1.3:XM_002687856:271_cdna Constitutive 0 NULL GeneID:514534 5 GENE WC1.3 NULL WC1.3 molecule EMBV3_19304 TAGGGAAGCGAGAAGACACGCCTTAGACACTTCTGCGGGCTGGGTCTCCAGTAGCCATTT Gene BVT0102_031315 + 0 NULL GK000012.2:80244064-80321481 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035775 TCONS_00035774 TCONS_00035776 1 XLOC_020994 NonCoding TCONS_00035776 XLOC_020994 NonCoding NonCoding - 12:80316570-80320395 - TSS26176 1077 2 TCONS_00035776_3 74 0.369545032497679 2 0.718880753138075 0.00194073948772362 0.00233803591486875 0.002169224838359 0.00223909798773113 0.00346644526603811 0.000121417085833571 0.00177589910944068 0.00123113542257339 0.00045573665043063 8.7867178588033e-05 0 1.4405350974256e-11 4.35826770952486e-10 1.07314656694079e-10 7.60063927203751e-12 0.000204364847704929 0 0 0.00389868617629521 0.00774889092577308 0.0033875027508397 0 4.37005614617355e-09 2.17197065709209e-10 0.00426192853917452 0.00181491530559282 0.00374844637225658 8.20886297958421e-08 2.25789658375991e-08 0 XR_227381.1 LOC101905905 PREDICTED: Bos taurus uncharacterized LOC101905905 (LOC101905905), 0.0 823 100.00 0.42246982358403 0 noncoding 1 0 0 0 -0.518019061476357 0.0118713937117372 -0.0673094309450162 0.179498045560115 CCCACCAGGCCAGGCCGCGCCCACCAGGCCAGGCCTCGCGGGGTGACGTGTCTGAACTGTGAAGGCGGAAGCGGGAACGAGGTCGCCGGGGTAGGAGTTGGCGAGGTGTGGCTGGCTGCTGGGCGTGCGCACGCGCAATCCGCGCAGTGGGCGGGCCAGATTGCGTCTGGAGACCGGAGACCATTGTTATAGATACAGGCTTCCCTTTTCCGGGTTTTTGCTAATGCTGAGCTCGGCGGATAGAGGTGGTGATGTGTGTAGGGAAGCGAGAAGACACGCCTTAGACACTTCTGCGGGCTGGGTCTCCAGTAGCCATTTGACGGCGAGCTAGCAGCCAGTCCTCTTTCTTTCCTCTGTGAATGGAGGATAAACGCGTGTGGAAAACGTCAGGTTTAAATTTGATTGAAAGTTAAACATCAGAGGAATGGACTTCGTGAACAAAAACTGTGGCCCATACTTCCAGTTCTGCAAGGATCAAGCCATTTGCTACTGCAGTCACCCAACAACAGTGCACCCTGAGGGGAACTCAGGATGGAGAAAAATCAATATTCTGTGCTTCGGAGCCTGGCCCTGGATAGTTAAGATGCATATCTAAGGAATAATTTCACTGAACTCAGATGCTTGCATCCGCTCATATGTACAAAAACAGTAAAATCTTTAACTTGAGATGTCTGTTCTTTGTGATTAGCAGTAACCTTTGGATATTGGCCTAGCTATTTTGTTCCAGCCAAAAAACTCATATACATCCTGTCTCCTCCCTTACCTCTTGAGACCGGTTCTTCAGAGCTATCTGAGAGGGGGTTTTCTATGCTATGTTCCTCAGTAAGTTCCCTGAATAAAACTTAAAACTTCCATGTTGTGTGTTTTCCTTTGTCACCAAAAGCAAGTTTCTCCTGGAACAGTGTACCACACAAACACACACAAGTACGTCGTGCACACACTAGCACAGGCAGCGCATCGCTTCAATAGGAAAAGTGACAGAAATTTGCTCAAGTATGATCGTCCCAGATTTCTATTTTGCATGAACTACATTTCTCACTGGGCTCTAGAGTATGCCCATGTCTTCCTTTGTAAAGA TCONS_00035777 TCONS_00035778 s 5' 1086 TCONS_00035777 TCONS_00035778 s 5' 4910 EMBV3_23279 GGGATCATGAGCATGAAATGGGATCCTGCATCACTTGTTTTAACTATTTATTTTGCCATG Gene GeneID:539432|EPC2:XM_002685364:259_cdna Constitutive 2 NULL GeneID:539432 2 GENE EPC2 NULL enhancer of polycomb homolog 2 (Drosophila) EMBV3_13363 CAGCCGGCGGGATGCGATCGTGGCCGAGCTGGACAGCCTGGAGTGCATGGCCATGACAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02905 TCACTCAGGTCTCTGGGAGAATCCATAAGTGCCAGACTGTTCAACTTGGGACCTGCCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24197 CTCAAGTGCTCCAACGACAGCTTCTCTGTGATTGCTGACTACTTTGGCCGAGGTGTTTTC Gene GeneID:540381|VPS11:NM_001076216:202_cdna Constitutive 0 NULL GeneID:540381 15 GENE VPS11 MGC137371 vacuolar protein sorting 11 homolog (S. cerevisiae) EMBV3_38996 ACTGTGCCTGGACATGCGTGTGCTTGGGGTGGCTTTCTCCCTAGGATGTTGTGTGTATAT Gene GeneID:524075|PDK2:NM_001075853:112_cdna Constitutive 0 NULL GeneID:524075 19 GENE PDK2 NULL pyruvate dehydrogenase kinase, isozyme 2 EMBV3_05007 ACGAGTTGGTGATCTTTGCTTTTGGCATCATCATGGGCATCAGCCCTCTCACATGCATCC Gene GeneID:507573|LOC507573:XM_002688604:367_cdna Constitutive 0 NULL GeneID:507573 7 GENE LOC507573 NULL similar to olfactory receptor 1357 EMBV3_18151 GGAGACTTTCTGGGACTTTGGTCTTGAAAGCTTCCTCTTCTAGCTCAGCTGCCCTCAATC Gene BVV0102_285006 + 0 NULL GK000003.2:32284476-32321549 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172896 1 XLOC_104241 NonCoding TCONS_00172896 XLOC_104241 NonCoding NonCoding - 3:32319238-32320578 - TSS128658 1340 1 TCONS_00172896_5 113 0.0626865671641791 1 0 0 0 0 0 0 0 0 0 0 3.07052069037625e-06 1.53751217715135e-05 0.000378745846991892 0 0 0 1.97101104706752e-05 0 0 0 0 0 0.000210437007657465 6.84630201078242e-06 0.00140122308929406 0 0 0 1.48189561113056e-05 5.43426981907262e-05 0.000555298448581182 XR_233958.1 LOC101903695 PREDICTED: Bos taurus uncharacterized LOC101903695 (LOC101903695), 0.0 1867 100.00 0.771641791044776 0 noncoding GTGTACATGGTAAGAGAGAAGGACTTTTGCCAAGATGCTGTACCTAAGAGGAGCCTGGCAGCAAAAGGGTTTGATGCCAGTGTCTGCCACTCCTGCAAAGAATCAATAGCCTTCTGGGAGAAAAGTGAGGTGCTGAAATAAGGGAGACAGCTGCTTGCTCTTAATAGCTTCAGACCTGACTTCTGTGGACTAGTAAAATCCGGTGTTCAGTGGCCCAGCCACGACTCCAGGGGAGAACGACAGTCACAGTAAATAAGAATGTTACAGTCTCTGCAATGGTGAGAACAGTGACCCAGAACACTCAGATCTGTCACCACACATTACTTGCAGTCTGTACAGACAGGCTGCACAATACTCACCACCAATCTGAGGAACAGGCATCTCCTGATCAGAGGGGGAAACTGAGGCACAGGGTAATTCAGGGACTACTTGGGGAATACAACAGAATCTCTTGGGGGTGGGACTTATGAGAGTTTCATGTTCATACTCCTACCTTCTGGATGCAGTACACACCAAACATCTCACAGATGTGGGATGCCTCTTGTTTGCAAAAGACCTTGGGAAGCAAAATCTTTTCACTGATCATTCTGGAACCTAAGGAAATTATTTCTTTCCCTAAATCGTTTGGGTTGCATATTCAGCCCATTTCTTCCTGCTTTATCGGAAAAGCCAAGAGAACAGCAAAACTCACAAACTCAAACAGAAGGACTCTTGGGCTGCAGACCAAGAAATCCAGCAAAAAAAAGAAAAAAAGATTGCTTCCTTCTCCCTTTCAAAGGGAGTTAACAACAGAAGAGACAAGGTCCATCAAACACAGGTTTATAATGGGTCATCTCATTTAAGGGCTTCTCACTAAACAACAAAATCTCGTTTAATCCCCAGAGCCCTGGAAAGGAATTATTATCCTGAATTTTAAGTACAGGAGGGAACCACCCTTTCTAGAGAAGTCAGAAGTCTGGTTACACTTGTTCCTCCACCAGGAAGCCCCTCCCACAGCCCTCTGAGGAAAAGTCCCAGAACCAGCTGGAATATAGGTGAGGAGACTTTCTGGGACTTTGGTCTTGAAAGCTTCCTCTTCTAGCTCAGCCGCTCTCAATCCAGGAGCACTGCCACTCCTCCCTAGAGGATGATTTATACTTGCTCCTGTGTGCGCGCACACATGCACACACACACACACACACAGACACACATACGCACATCCTCCTAACCACACAGTTGCCTTGGAACCAAAAGGGCAAAAGAGGGAGGGGAAACTCCAGGGAAGGTGGAGAATAGTACAGAAGATGAAAAGAGCACACTCTTCTGCAGGCTGCATGCCAGACCTCAGGACAGGTAATACT TCONS_00169454 r 5' 913 TCONS_00169454 r 5' 913 EMBV3_37624 ACTATTTCCACAAATACTTCTTCCTCTACACACCCACTTAGCTCCTCAGCACCAGCCCCC Gene BVT0102_052499 + 0 NULL GK000004.2:72075483-72413175 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182017 TCONS_00184521 2 XLOC_110747 XLOC_111360 Coding TCONS_00184521 XLOC_111360 NonCoding Coding - 4:72212488-72215541 - TSS137390 2562 5 TCONS_00184521_2 43 0.112021857923497 2 0.161205766710354 0.0778432223684083 0.0399373870534021 0.0625290092647131 0.0481944006022769 0.0346162676489481 0.0209478691842401 0.0237632046934752 0.0411765321295066 0.047770140861022 0.0180650302078535 0.00613219214252487 0.00857991108673238 0.0144878631815421 0.0345038057114069 0.0228174026333824 0.000796514563250817 0.00245599782422284 0.00257932204669151 0.0338322408636333 0.0696131098214711 0.0257989626630906 0.000739909165535222 0.00486328832005517 0.000170132023679605 0.102274946254351 0.0600381385871772 0.0642758562366457 0.0043382779938374 0.00255781867122611 0.00213818768272674 XM_005219700.1 LENG8 PREDICTED: Bos taurus leukocyte receptor cluster (LRC) member 8 (LENG8), transcript variant X1, mRNA. 3e-114 417 76.14 0.233801717408275 NM_052925.2 LENG8 Homo sapiens leukocyte receptor cluster (LRC) member 8 (LENG8), 3e-120 437 75.72 0.266198282591725 0 noncoding 1 1 1 1 -0.664235332427032 0.0997090883815537 -0.779874594207936 0.00163579067291267 GAGTTGAGAAATGTATACACAATTCGTTTCCCCTTTTAGGCTGTTGCCTAGAGGCGATGAGCTGGTGAGGGGCTGCTTCATCTAGTAGTTAGCTTCTCACTGACCCATACGTTGCTGCACAGGCAGGGGTCAGGGTACAGAATAGCCAAGAGGCTATCAGATCCAGCATTAGCAGCCTGGTGAATGGAGTGGAACATTAGTCCTGGCTCAAAGCAGTTGCTTCAGCTCACATTGTGTTAACCTGTGATAGATGCTGGCCAAATCTGTAACTGTAGAGAGTCCCAGACTTGTGGACTCAGCTGGAAAGGCTGACCTCAGCTACCCATTAGAATCAGCTGGGCTCTTTTTAAACTCCTGATGCCTAAGATGCAGTTTGGACCAATTGATCAGAATCTCTAGAGGTGGTACTCAGCCATCAGGGGTTTCGAAATCTCTGCACGGTTGAGAACAACTGCACCGAAGAGTGAGGGCAAATACCCAACACAGCCACCTATGGTTCTCATTCTGGGATGAGACAAACACTTTGGGGGATACTGCAAAACCTAAGGGAGTGTTTTGGTTATTACAGCAACTGGGGCTACCACTGGCATTTGGGGTGGGGGTGTGGGTCAGGGACATTAAATACCTCCTGCACTTTGTAGAACGGTTCTTCACAATGATCAATGACAAATCTCCAAGGTACATGCAAGTGTGTGTGTGTGTGTGTTGAATTTGAGAGACACTGAGTACACATATCTTTTGTGTGGAGGGAGATAGCCGGGTCAGTTTTGGCTTGAGATACTGTTAATGCAGAAGCAAGATGTGGAGGTTCTCCCAGGAAAAATCAATAACCTGCTTGCTGACACCTCTCTATAGTGATTTGTCTCAAGTGAGAACACTAGCTGTGCATGTGTGTTCATAGCAAATGGCAAAAATTTCTACTATTTTCTCCCAGAATCTTCTTGAATATTAAAGCAAATCATGGCTGGGGGCTGGTGCTGAGGAGCTAAGTGGGTGTGTAGAGGAAGAAGTATTTGTGGAAATAGTATTGGCCAGGATTGACTGAGAGGACAGGGGTTTCTTAATTTGGCAGATTCCACACGGTCCACTTGGTATCTAAAACAAAAACAGATGACACAAACTAGAAGTCACCATGATTATGGGACACATATGTGATCTGATATTATAGGTAGGGAATCAGCTGTGAACTATAAAGGTCCAAATTTCATCGACCACCTGCCCTGCCTGCATGGATCTGCTGCTGTTTCTGTGATATTTCCAGCATCTCCCTCTCCTCTTCTCTCTCTCAATTTTAGTTTCTCTCAAGCTTCCAAGTAGTGCTCACTGCTCTAAGGAAACACTGAAGGAAGGAAAGGGTAGGGAGAGAGGAAGAGGAGGGGAGGCAGAGGAGAAACATTGGAGAACAAAGCAGCCTGACAGCCCAGCTGTTTGCAAACTCATTGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGACAGAAAAGGGGAGGAGGAAAAAAATAAATTATACACACACGAAAATAAAAGAGAAGGAAACAACTGTGAGTTGGTGATCCAGGAAGCAGGGAGGAAGGGGTAACCCTTTTACCTGTGCTAAACTTGGGAGTGGGAGCAGGAGGGAAGGAAAGGAGGGAAGAAACGAAACACTAAAGGTGGAGGGAGAGCGGACACAGACCCAATACAACAGCAGACAAGGCAGCCCCTGATGGCCTCCAGAGTCCTCAGTGCAGGATGGTGATGTGGCGGTGGCGAGGCCTTGGCATTTCTGGGATGGGGGCCGAGGGCAGGGCACAGCCTCTTCGTTGTTCCCCTTGCCCAGAGCACTGAGACCCCAGAGGGATGGGCAACAGGAGTCTGTGGTGAGGCAGGGGCTGACTGCGGACGGAGGGCTGGTATACTGGTGCCCCCTCAGTGGTAGGCGGGAGCGGGGAGCCTGTCATCTTCCAGTACGCTTCACACTCACACCCACATCCCAGGCCCCTTGGAGGTGCAAGATGGGCACAGAGGAGCCTACAGACCATGCCCCCCACCCCTCCTCCCCCAATCCCATCCCTTTGAAAGAAAAAATAAAAGTGTAAATAGAAAAGGTGCTTGTCCAGAGCCCCTGGTGGGAAAACAGAAGGCAGGAAAGGTGGTTCTTCCTGCAGTCCACGCCCCACAAGTTAATTTACAACCTAGGTCCATGGTTTAAAAACAAAATCTGCCAAGGCGGTGCTGGAGGCTGCAGACCTTCCCACCGCCCCCTCCTGTGGCCCCGCCCCGGCCCAGGTCCATCCGCTGATGCTCAGAAGGCGCACAGGTGCGTTGGGCTGAGGCGCTGAGGCGGCGGTGGACGCTGGCGTCGTCTGGCCCAAGTAGACCTGGCCCAGGGATTCTAGGAAGGCCTGGCAGCAGAGGCACGTCATCATTGCTTGCTTCAGGTTTTCACCACATCCAGCACCCTGGAGGAGAGTGCAGCAAAAAGGATGCAGTATTGAGCTAGAAGGTCCTCTCTGTGCATGGTTCCAAGCTCTGCCTTGTAGGCTGGGATCACTGAGGCCTAGAGTTTCAGGGT TCONS_00184518 s 3' 492 TCONS_00184518 s 5' 0 EMBV3_15701 CTGCCGAGCACCCGGAGGGGCCCAGCCTTTTCTGATTACTTGTACTTCAAGCACAGAGAT Gene GeneID:539632|ZNF366:XM_002696265:53_cdna Constitutive 0 NULL GeneID:539632 20 GENE ZNF366 NULL zinc finger protein 366 EMBV3_41736 CCAGGCTGGCATGAGGAATTCTGAAAACCTGACAGCAAATAACACTTACAGCAAGCCCAC Gene GeneID:540902|TRPC7:XM_002689205:100_cdna Constitutive 0 NULL GeneID:540902 7 GENE TRPC7 TRPM2 transient receptor potential cation channel, subfamily C, member 7 EMBV3_09291 GGGCTGTGCTCGTGAACATACCAGCGTTTTCGCCCATTTTCACCATATTGGGAGCATCAG Gene GeneID:617066|LYPD4:NM_001076442:403_cdna Constitutive 2 NULL GeneID:617066 18 GENE LYPD4 MGC133841 Ly6/Plaur domain containing 4 EMBV3_07950 CAGGCACTTGACCCTTGGTGTAGCTTCTGTTCGACTTTTTATCACGGGAACGGATTGGTC Gene GeneID:513993|CSDE1:NM_001098025:50_cdna UTR3_Alt 2 NULL GeneID:513993 3 GENE CSDE1 MGC139021 cold shock domain containing E1, RNA-binding EMBV3_27318 TGGTTTTGCAGGGGGAAGATCAGGGTTTGTGGTCCTCTTGTGGGAGGTGATGTCCAATCT Gene GeneID:337925|SLC8A1:NM_176632:39_cdna Constitutive 0 NULL GeneID:337925 11 GENE SLC8A1 NCX1 solute carrier family 8 (sodium/calcium exchanger), member 1 EMBV3_41234 AGCTAGTTAGAACCATCTGGGGGACGTATAACTAAACACTACCGACTTTGCCCGGAGCCA Gene GeneID:529868|LOC529868:XM_002696572:186_cdna Constitutive 0 NULL GeneID:529868 21 GENE LOC529868 NULL similar to leucine-rich repeat kinase 1 EMBV3_11972 ACACAGGACCCTGGGGAAGGACCATCTTCACGACATATCGATTTAGAGAGGGTTGAGGCA Gene BVV0102_227477 + 1 EMBV3_28387 GK000019.2:38246284-38253557 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03744 ATTCTCCTTGGAGAAGGCCACATCCCCAGGGCAATTTGATCTTCCCTCTGGGTATGGGAA Gene BVV0102_092561 + 0 NULL GK000001.2:35559-66182 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005813 1 XLOC_001376 NonCoding TCONS_00005813 XLOC_001376 NonCoding NonCoding - 1:48609-49857 - TSS2890 1248 3 TCONS_00005813_2 61 0.112980769230769 1 0 0 0 7.41506921751386e-06 0 0.000272969644122839 2.86622689152388e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.72993097714439e-06 0 0.000124966970960523 0 0.00011103316665368 5.13218073400641e-07 9.3896706278009e-06 0 0 0 XR_232013.1 LOC616903 PREDICTED: Bos taurus protein CutA homolog-like (LOC616903), 2e-55 221 88.37 0.137019230769231 0 noncoding CCACTCCGTGATCTTATTCTCAAAGAACTTATTTGAGCAAAGAGATTTGTAAATATTCATCCATGAGTGGAAGGTGGGTAGGGAAAGGGAGGGGAGGAGAGTGTGTTGGGGGGAAGAGAAAGTATAGAATTCTGAGTTGAATTACAGTCATCTCAGTGCAATGATCCTTCACAGGGTCTCTGTTCTGTACTGGGCCATGTTTCCCATACCCAGAGGGAAGATCAAATTGCCCTGGAGATGTGGCCTTCTCCAAGGAGAATCTCCCTCAGGACCCAAAGTTTGCTGCTTAGGGGGTATCTTAGGCCAGAAGTACCAGGAGTGTCGCAGTCCGTGGGTAGGATAGCAATCACCGTGATCCCCTGTGAGGTGGAAATCGCAACGTTGGGGTGGGAAATGGCGGTGGGAGCACTAATGAGAAACTGAGGTTGTTTTTTCTGTGGAGAAGCTGGATACCCGTGTTTGGGCAATTCCAAAGCACGGGGCCGAGGCCTACATGCTTACATATAGAAACGGTGGGTGGCATACAGTGGGTGAGGGGCAGGGGGCAAGCAGTGACGCCCTCCCAGGTGGCTGCGACGGCAGGAGCAGTTAGTGCTACGCCTTGCCGGGAATACCGAGTCCCCTCACTCATGGCAGAAGTTTGAGCCGTGACTCCCACTGCGGTGAAAGGAGGAAGCGTTATGAGCGGTGTCGCTCTGGGGAGTGAGTCAGCAGGGGGAAGGGGCCAGCAGCTTCACTCCCCTTGTTCCTCTCTCCTGATTCTTAAAGGAGTTACAACGGCCCAGTCAGGTCTCAGGTTGACAGTTCCAACCAGTATTTCTCAATATGATTCATAACAAAACCTAAGAGTTGAAGGATCTTGTGTAAAACATACACACAGAGGTGATGGGCCAGGAATGAAGAGACCTTACCTCTTGTTCTGATATTCATCATTCAGTTTCCTCATGTGCAAGACACGAGGACAGTTTTGAAAGGCTTCTTACATTAAAATTGTATAATTCTGTCAAAACCACCAATGTAAACATTTCCGTGTTCCATTGAACTATCATGCTTCATTACCCTATTGTTATTTAACTCCCATTTCAAAATTACTGGGTTTCCCTGATAGCTCAGTTGGTAAAGAATCCGCCTGCAGTGTGGGAGACCTGGGTTCTATCCCTGGGTTGGAAAGATCCCCTGGAGAAGGGCAAGGCTACCCACACCAGTATTCTGGCCTGGAGAATTCCATGGACTGTGTGGTCCATGGGG TCONS_00002808 . 3' 33492 TCONS_00002808 . 3' 34739 EMBV3_28798 ACTAACATACACATACGTAGAGATGCCACAGAAGCTACCCATAATTGATCAAGGTGGTTG Gene GeneID:281161|FGF2:NM_174056:8_cdna UTR3_Alt 1 NULL GeneID:281161 17 GENE FGF2 NULL fibroblast growth factor 2 (basic) EMBV3_31903 ATTCAAACATCTCCTGAAGAAAACCCAGGACTTCCTTTGAGAGGCTGCTGTGGCGAATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27492 TACAGACCACCTGTAATGGCACCATTCCTGTCCAGAGAGATGTAAACAAATGTAAAGATC Gene BVT0101_023431 + 0 NULL GK000006.2:73970920-73985966 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203608 1 XLOC_124209 Coding TCONS_00203608 XLOC_124209 NonCoding Coding - 6:73977930-73983182 - TSS152471 5252 1 TCONS_00203608_15 142 0.811500380807311 1 0 2.81176454683521e-06 5.73977639798324e-06 0 0 0 0 1.11037847967405e-06 9.57256089627302e-06 6.00924985269553e-06 1.29868543800088e-05 0.000113210170894223 4.89678384658714e-05 4.2450331609087e-05 0.000152367549405262 0.000385460286596199 0.000893370744180977 0.000270589960113411 0.000328993693730257 0 6.8463707517787e-07 1.61286572022816e-05 0.000119061920602462 6.88282487512226e-05 0.000259145479487245 0 0 0 0.000181516690854887 6.95177034583141e-05 0.000272636471834461 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 856 87.12 0.130997715156131 0 noncoding 0 0 0 0 -0.0627300888170871 0.818016979726168 0.00925277978118048 0.893501187349187 GGGCGCGCGGGCCGGGAGGGGGCAGCCTAGACTGGGAAGACTCGGTCTGGCCCAACGGCGCCCCGAGTTTGCTCGTCTCGCCGTCTTCAGTGGTGGGGAGCCCAGGAGACGCTTCGGGACGACTTGGTGTGTCGATGGTGCAGTGAGCGGGCCGAGGCGAGGGGAAGCGAGGGCGCCGGAATTTGCGAAGAGCTGCTTTGTGTTTGGTACGTATTTTGAGAAAATGGCCGAATGCCTATTTCAGTCAGGAATGCCGCGGCCGAGGCCGGCGCTGGTGAAGGCAGCACGTAGGATCCGAGTGGCACGTTGGGCTTTCGGGCTGTGCGCGGACGGCCTTCCTGAGCAACGTTGAAATGCCTGTAGGAATGGTTGTTAGGGTTTGGGGAGAATTAGGAATTACGAGTCACCTGGGCTGTTTCGTTAAGGCCTTGGACAGCCTTTGCTGTGTGATGGCATTTGATTCCGACTTTCGTTGGTACCTATGACTCAACGAGTTTGTGTTTATCCGCTTGGGTTAAACTGATTACTTTTGGTATTTTGGGTGTAAAATTTTTTGAGCCCTTGCCACTTTGCTTTTTCTAATTCGCAAGAGAACATCTAATTTGAGAATTAACACCTTTTAGGTTGGAAAGTAATGAGGTTAAGACACTTTATTGAAAAGCCCAACGTTTTTTCAAAGAGATTTTATTATGGCTCCTCTAGGCCGTTGAGTCAGATCAAACACAAGGCAAGAAAGTTGCTGATTTGAAGATGAGTTATTCAGTTAATGGGTATTTGAAAGCTCTTGTGTTTTCATTTATGTATATTTAAATACACTAAACTTCCCTTTTCACAGGAAAAAAGATATTTAATTTTTGTTTACTTTTAAACAGGTCATCAAGAAAAGAAACTTAAGTAATACTTTAATGGTATTATGTACTTTTTCAAAGTACATTGGACCCTTAAACAACAGGAATTTGAACTGCATGGGTTCACTTATATGGATTTTTTTCAAGAAATATATTGGAAAATTTCTCATAGATCTGCAACATTTTGCAGAAGTCTACAGATGATACACATAGCCTAGAAATATGGAAAATTTAGAAAAAGGTACATCATGAATGTATCAAGTATACATAGATAATGTATTTTATCATTGACTACTGTAAAATGTATACAAATCTAATAAAAGTTACCAAAAATTACAGACCACCTGTAATGGCACCATTCCTGTCCAGAGAGATGTAAACAAATGTAAAGATCAATCATTCACCCATAACTGCATATTAACTGTGGTCCATACTGTGGGTCTGTAATCATTTCATAGCTACCTGTTGTTGCTATTTTGGTGAGCCTCAAGTGTTTGGAGGGATCCACTTAAAACGTCTTGTAAGTCTAATCATATCTGGGTGAGCAGTTCTCTCCAGTAAATTGTGCTTGCAGAAAAAAAGCCACCTCTCCCATTTCCTGAGTGTTTTTCATTGTGTTTAGTGGGATACCAGAAACCTTGAATGACTCCATGGGACCCATATAAAGTGCCACTGGTGATGCTGGAAATGCTCCCAAGCAGTAAAGTCATGGCATTGGAAGAAAAAGTTAAATTGCTTGATATTGACCATATCAAGTTCTGCAGTTTCCATTACCCACCACTTCAAGATCAGTGAATCTAGTGTAAGGGTTATTGCAAAAAAAAAAAAAAAAAAGAAATTTGGAGACTGTCTCTGCATTTTTGCCAGCAGACATGAAAGCCTTACACTTTTTGTAATATGCCTTCTGTCTGATATTAAAAATGCCTTTTTGGGAATTCCCTAGTTGTCCAATGGTTGGGACACCGTGCTTTCACTGCTTGAGGGTTCAGGTTTAATACCTGGTTGGGAAACTAAGATACCACAAGCCACCAAGCTGTGTGATGTAACCTTAAAAAAAAAAAAAAAAGAATTTTTCATGTGGGTATAGTTATGAAAGGCATACCTATAGAGTAAATTGATTCGAGAAAAAGTGAAGTTATTGTATGACAATTTAAAGCAAAAGGAAAATGAAGTTTCTAAATCTGGAGACTTTAATGCTGGCAGAGAATGGTTTGGTAATTTTAGAAAGAGTTTTGACTGAAAAAATATCAAGATAGCAGAACCAGCTTTGAGTTCCCAGATGCTGTTAACAAAATTATTGAAGAGAAAGGCTGTCTGCCTAAACAGGTTTTTAATACAAAGTAATGTGCCCTAGTCTGGAAAAAGTTGCCAAAAAGCTCATTCATTACTAAAGAAGAGAAGTGAGCATTAATTTGGATTTAAGGCTGGTTGAAGACTAGCTTGTTTTGTACAAATTGAGTTTTTGATCAGGACTGTTCTTATCTATAAAGCTGCCAAGCCCACTTTTTTTTTTTTTTAATGGAATTGTTTTTCTTTCGTTCTTTGTCTTCCTTTCTTTTTTTGGCTTGCACGATCTCAGTTCCCCCACCTGGGACTGAACCTTGGCCACTGCAGTGAAAGCCCAGAACCCTAACCATTAGGCCACCAGGGAACTTCATAAGCTCACTATCCTTAAAGATAAACACCAGTTACTATTCTTTTGGTTGTATAATAAGAAGGCCAGGGCAATGAGAATACTTAACTAAATTGGTTCCATTGATGCTTTATCCCTGATTATGAAGTACTTCGCAGTAAGGGGACTGCATTTTAAGATTCTTTGGTATTGGACAGTGACCCTGGCCACCTTAACCCCATGAGTTCAACATTGAAGGTGTCAAATGGTATTCATGCGTGTGTGCTAAGTTGCTTCAGTTGTGTCCCACTCTTTGCGACCCACTCTTTGCGACCCTATGGACTGCAGTCTGTCAGGCTCTTCTGTCCATGGGATTCTCCAGGTAGAATACTGGACTGGTTTGCCATTTCCTCCTCCAGGGGATCTTTCCGACCCAGGGATTGAACCGAGGTCTCTTACATCTACATTGGCAGGCAGGTTCTTTACCACTAGCACCACCTGGGAAGTCTGTCAAAGTGGTTCCCAAACACAGTGTCTTTTAATAAAGCCTATATTAAGGTATCTTAAGGACCTTGAAGTGTCATTACACATGGTACTCCATAGAAAGGATTGTCAGTGCTGTGGAAGACAACCCTGATAGAACATCGTGAAAGTCTAGAAGGACCATACTGTTGAAGATGTTATCATTGTGATAGCAAAAACTATGAAGGCCATCAAGCCTAATACAAATTTCTGCTAGAAGAGACTGTCCACGTCTTGTGCATGAATTCACAGGATTTACCACAGCCAATCAAGGAAGTCATGAAAGAGATAGTGGATACTGGAAAAAGGTGGATGAAAGGCTTCATGATACATATTTTGGGAATATTCAAGAGTTAATAGATAGCATACCAGAGTAATTAATGGAAGTTAATTTGGAGGTGAGTCCTTTAGAACCAGTGTAAGACTATAAGGAAAAAGACATGGAAGAAGCAGCGCCAGAAAACAAATTGACGTTAGACAGTCTGGCAGCAAGGTTCCTTTTGTTGAAGATTGCTTTTGACTTCTTTTACAGCTTGGCCCCTTGTATGATACAGACACTAAAACTAAAGCCCTTGGTAGAAGGATTAGTACCAAATTGAAACATTTTTAGAGAAGTAGAAAAGGAAAATTTGGACAGAAATTTAAGATATCTTTCTCTCAAGTTTCGCCTCTTTCCACTTCCTCCACCTCTTCTCTCTCTGCACCTCCTTCTGCCTTCTTTTACACTTCCTCTGCCTCTTCTGACTGCCACTCCTGACTCAGCAAGAGCAACCCTTCCTCCCCCAACCCCCCTACTCAACAGAAGACAGGAGGATGAAGACCTTGATGATGATCCACTTCTCTGCTTAATAAATGTTAATCACACCGTTCAGTTAATAAACTTATCTGTCATGTATGTGTATAAGTGTCTTGTAAAAAATCTAGTAATTGTACACCAAGAGCTGGAAGACATTGTGTCATCACCATTGTTACCTAAGAATTCATTGTGTGCAAGACTTGAGAAAGGTATTAGTTTTTCTACTGTTGTATAATTTTGCTTTTGAATAATTACATTACCTGGAACTTCCTTGGTGGTCTAGTTGTTAAGAATTCATGTTCTGCTGTTGCTGCTAAGTCGCTTCAGTCGTGTCTGACTCTGTGCGACCCCATAGATGGCAACCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACAAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAAAGTGAAGGCGCTCAGTTGTGTCCGCCTCTTTGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCAGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATCGCAGGGGATATAAGTTCAGTCCCTGGTCTGGGAGGATCCTACCCACATGTCGAGCAGCAATTAAGCCTATGGGCTGGAACTACTAAAGCCTGGGCTCTAGAGCCCCAGCACTGCAACAAGAGAAGCCACTGCAACTACAGAGCAGCCTCTGCTTGTCGAAACTAGAGAAAGCCAACACGCTGCAACGAAGACTCAGTACAGCCGAAAATAAATTTTCAGTCCAGTTCAGTCGCTCAGTCATGTGCAACTCTTTGTGACCCCATGGACTGTAGCATGCCAGGCTTCCCTGTCCATCACCAACTCCCGGAGCTTACTCAAACCCATATCCATAGAATCGGTGATGCCATCCGACCGTCTCATCCTGTATCGTCCCCTTCTCCTACTGCTTTCAATCCTTCCCAGCCTCAGGGTCTTTTCCAGTGAGTCAGTTCTTCACATCAGGTGGCCAAAGGATTGGAGTTTCAGCTTCAGTGTCAGTCTTTCCAATGAATATTCAGGACTGATTTCCTTTAGGATTGACTGGTTAGATCTCCTTGCAATCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGACACTTAGCTTTCTTTATAGTCCAGCTCTCACATCCATACATGATCACTGGAAAAACCATAGCCTTGACTAGAGGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTTAATACGCTATCTAGGTTGGTTATAGCTTTTCTTCCAAGGAGTAAGCGTCTTTTAATTTCATGACTGCAGTCACCATCTGCAGTGATTTTGGAGCCCCCAAAATAAAGTCTGTCATTGTTTCCCCATCTATTTGCCATGAAGTGATGGGGCCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAATTTTTTCAC TCONS_00203609 s 5' 0 TCONS_00203609 s 5' 0 EMBV3_13053 AGGCCGTGGGTCTTGCAGCACATTTGTAAGGTAGAGTTGGCTTTATGGGACACAGCTGGG Variant GeneID:338049|RHOA:NM_176645:73_cdna 79^236 1 EMBV3_08771 GeneID:338049 22 GENE RHOA ARHA ras homolog gene family, member A EMBV3_16219 CGGACGTGAGGCTGATGAAAAGGAAAACAGAAAAAGTTGGTGATTCAAGGAAAGCATATT Variant GeneID:534216|RBM5:NM_001046374:235_cdna 560^633 2 EMBV3_22877 GeneID:534216 22 GENE RBM5 LUCA15 MGC137881 RNA binding motif protein 5 EMBV3_10523 TCAGAGTCCTTGCTGGTGGTGCACTCCTTGTTCAGCCAAGATGGATGTCAGAGAGAAGGA Gene BVT0102_225420 + 0 NULL GK000018.2:26132553-26169326 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049923 TCONS_00198001 TCONS_00105794 TCONS_00186757 TCONS_00203764 TCONS_00105516 TCONS_00035555 TCONS_00186759 TCONS_00253850 TCONS_00086693 TCONS_00071855 TCONS_00105517 TCONS_00087769 TCONS_00087768 TCONS_00089250 13 XLOC_030054 XLOC_119659 XLOC_062643 XLOC_112809 XLOC_124263 XLOC_062585 XLOC_020940 XLOC_112811 XLOC_156788 XLOC_052219 XLOC_043625 XLOC_052590 XLOC_054035 Coding TCONS_00105794 XLOC_062643 NonCoding NonCoding - 2:90231974-90248208 - TSS77972 1026 2 TCONS_00105794_2 57 0.119883040935673 2 0.936918622558985 0 0 0 3.17967341283374e-06 0 0 1.5788589450471e-11 1.04492493110321e-05 5.56979861550227e-05 0.00228350305254083 0.000634205832531842 0.000563381185884682 0.00229099122643596 0.0041589014801676 0.00134627222274139 0.0384106252897684 0.0228689381319732 0.0550653309974162 3.10631942985492e-06 0 9.86267194563775e-07 0.0169328196627207 0.0206373919747268 0.0272895760181398 0 0 2.85534389093468e-06 0.00360609847909873 0.00235037458449443 0.00562811710279824 XR_227982.1 LOC100848180 PREDICTED: Bos taurus uncharacterized LOC100848180 (LOC100848180), 5e-138 495 82.11 0.475633528265107 NM_017686.3 GDAP2 Homo sapiens ganglioside induced differentiation associated protein 2 (GDAP2), transcript variant 1, mRNA. 2e-16 91.5 77.69 0.121832358674464 0 noncoding 0 0 0 0 -0.0658205733623288 0.664489944205605 0.0502381190048198 0.342564753660519 CTCCCAGAATCCTTCTCTCTGGCATCCATCTTGGCTGAACAAGGCGTGCACCACCAGGAAGGACTCTGAGTCAGAATGATTGGCTAAGGACAACCCGGAAACTAATCCCATCACCATAAAACCCAGACTGCAAGCCACATAGCACAGCAGTTCTCCTGGATTCCCTTACCCTACTGCTTTATGCCTGGACGCCCTTTCGCAATAAAATCTCTTGCTTTGTCAGCACATGCGTCTCCTCAGACAATTCGTTTCCGAGTGTTAGACAAGAGCCCAATTTCAGGCCCTGGAAGGGGTCCCCCTTCCTGCAACAAATAGCGACTCTGGTGGGATTCTTTTTTGTTGAGACTGACATCCTGACCACTTGAGGAGACTGACATCCTGACCACTTGAGGTACTCAGGGGCCAGCTTGCCCGCCAATGGACCAGACCCAGCAGCTGCAACTGAGACCCTTTTGTCCCTGGTCTCCTCCTGACGCAGACAACTGGCCAGAGTGCCCTGACCGACCTTGCTAGATGTTTCCATAAAGGTAGAGAAAAGGATCCTGCAGGAGAAAAGAAACTGAGACCTTTTGAAAAGACTCCAAATGGTGAAGAATCTGATGAAGAAAGTCAAAGACTATGAAGATTTAAGTGAAATGTAGCAATAAATGATGCTTTTTTTAGCTCAATTTATTCTTTCATTGAAAAGTCACGTCACATCATTCTTCGGTGTTTGTTTTGTATTGATTTTGTATTTTTTTCCAATTTTTACTTCATTTATTATAATATCTAAGTATTTATATAGAAACATAAAGCTACATACAGATGCATTAGGTTTATAGCTCTTGCACACGGATAAAACCAAAACTTTACAGATCAGACACAAGGAAAACACAAAACTGCACATGAATTATAAAAGCTATGCATATTATATAAATAAGTACATTAAACAGAGATGGACTACAAATTCTAATTTTAAGAAAAGATTTATAGGACCGGATTTTGTTTAAACAAATAAAAACAAACAAAAAACAAAACTGACAATAC TCONS_00102897 r 3' 11394 TCONS_00102897 r 3' 11916 EMBV3_27179 TAGCCGCTCCAATCCCACCGACATTTATCCCTCCAAGTGGATTGCCAGGCTCCGCCACAT Gene GeneID:504985|TSC2:XR_084065:567_cdna Constitutive 0 NULL GeneID:504985 25 PSEUDO TSC2 NULL tuberous sclerosis 2 EMBV3_02237 GGACACAGCTCGGGATTTAAAGAGAGGGGGTTGAACCCCACTCCCCTCCTCCCAGCTCAG Gene GeneID:616723|CCL14:NM_001046585:289_cdna Constitutive 0 NULL GeneID:616723 19 GENE CCL14 MGC137043 chemokine (C-C motif) ligand 14 EMBV3_41276 TTCTCGGGCCAGCCACGTGTTCTCCAACATCAAGAAGGGCGTTCGCTTTGTGTCTTTTGA Gene GeneID:789309|LOC789309:XM_002695043:359_cdna Constitutive 0 NULL GeneID:789309 18 GENE LOC789309 NULL similar to F-box protein 27 EMBV3_37222 TGGCTGTGGACTGGCTGCTGGACAGAATGAGAACGTCTGTCAATGTTGTGGGTGACTCTT Gene GeneID:541119|SLC1A2:XM_002693523:10_cdna Constitutive 0 NULL GeneID:541119 15 GENE SLC1A2 NULL solute carrier family 1 (glial high affinity glutamate transporter), member 2 EMBV3_05368 GTTGTACCTGATACTGTTGACATGACAAAGTACGTGGACCGGCCCTGCCTGGAGCCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02164 TGCTGGAGGCTTTGACAGGAGTGGACTGGGTCATCTGATTCTGGCTCGATTTCCTTACCT Gene GeneID:613577|HERPUD1:NM_001102265:409_cdna Constitutive 0 NULL GeneID:613577 18 GENE HERPUD1 MGC152403 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 EMBV3_00809 CCAGAGGACAGCGCTTCTCCAGGATCTGTATGCAACTATCCAGAAATGGCCAAGTTCAAG Gene GeneID:521973|ZYG11A:XM_002686400:260_cdna Constitutive 0 NULL GeneID:521973 3 GENE ZYG11A NULL zyg-11 homolog A (C. elegans) EMBV3_36293 TGGACTGATTTGGTGATTGAAGTTCCCAAGAGCTACCCAAACACGAGAAACCAAGGTTCC Gene GeneID:509418|CSF1R:NM_001075403:37_cdna Constitutive 0 NULL GeneID:509418 7 GENE CSF1R NULL colony stimulating factor 1 receptor EMBV3_29927 TGCTCGCTGTGGCCCGCCTATGCTGTCTTTTACTTGAAACGTCTGGCTCACTTGGTCTAA Gene GeneID:782160|PPP1R3D:XM_002692413:374_cdna Constitutive 0 NULL GeneID:782160 13 GENE PPP1R3D NULL protein phosphatase 1, regulatory (inhibitor) subunit 3D EMBV3_36300 TGTAAATGTGCACATCCGGATACCTGTGTCATCAGGACAGCTTACCTGGTGGGGTAGGAC Gene GeneID:540304|WIPF1:NM_001076923:40_cdna UTR3_Alt 2 NULL GeneID:540304 2 GENE WIPF1 PRPL-2 WASPIP WAS/WASL interacting protein family, member 1 EMBV3_21292 TGCTGTGTCTGTGGCGTCTGTAGTGCCTGTGATCGTGTGTTGCCATTTTGTCTGGCTGTT Gene GeneID:280937|SYP:NM_173963:18_cdna Constitutive 0 NULL GeneID:280937 X GENE SYP NULL synaptophysin EMBV3_05608 CCTGCCCAGGCACTAGCCTGTGTGGCCCAGGGGGCCCTCAGGTGGCCGCCTCCCTCTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29856 CATCACCAGGCTGTAAGCAATATCTTGAGTTTGTAGCTTAGAATTGGGAGGATAATGAAC Gene BVT0102_042530 + 1 EMBV3_19642 GK000012.2:25641459-25792899 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036572 TCONS_00036575 TCONS_00036573 TCONS_00036574 TCONS_00036576 1 XLOC_021180 Coding TCONS_00036574 XLOC_021180 Coding Coding NBEA 12:25791632-25963413 j TSS26594 4221 1 TCONS_00036574_7 760 19 0.97553847945046 0.000904659714283743 0.000720686120379545 0.000256067352924234 0.000561631188205296 0.000445579235562099 6.67390402891494e-05 0.000397062043917864 0.000277035558611621 0.00100200466046694 3.08476728528498e-05 2.26601655787766e-08 3.18626979337349e-06 5.25014279953743e-15 0.000268512381192195 0.000110869440877232 5.14004088295319e-10 5.74787898479826e-11 4.6950608343544e-10 0.00106885741620175 5.98633237954953e-08 1.043248683478e-08 6.49838102960116e-11 1.26885939509685e-10 1.51439507657779e-10 0.000827778930747208 0.000468965231627182 0.000374333943459587 1.19261825985966e-10 1.05790062149773e-08 5.39450547206536e-10 XM_005194130.1 NBEA PREDICTED: Bos taurus neurobeachin (NBEA), transcript variant X2, 0.0 5025 99.47 0.667614309405354 XM_005266347.1 NBEA PREDICTED: Homo sapiens neurobeachin (NBEA), transcript variant X2, 0.0 6046 92.94 0.96470030798389 TCONS_00036574_7 sp|Q8NFP9|NBEA_HUMAN NBEA_HUMAN Neurobeachin; 0.0 1559 96.97 0.998684210526316 3 coding 1 1 0 0 -0.337877126193241 0.134257472302709 -0.023014292272937 0.70373199881946 ATTAAGGAGACTTTACACTTCATGTTTGCATCATTAGCCAAGACTGTTGTGTGAGGGCAAGGCTGTGTGTCAGGGTGGAGCAGGAAAGGCTGCAATGGGGCAGATGCGGCACCCTCACCCCACCCCGGGCTGCACCCAAGGGAAGCTCAGTCCTTGCGTACACTGAGGGACTTCATGGAAAATGGATGTTCAGCGAGATACGAGCTGTATTTTCAAGACGTTATCTTCTACAAAATACTGCTTTGGAAGTGTTTATGGCAAACCGAACTTCAGTTATGTTTAATTTCCCTGATCAAGCAACAGTAAAAAAAGTCGTCTATAGCTTGCCTCGGGTTGGAGTAGGGACCAGCTATGGTTTGCCACAAGCCAGGAGGATATCACTGGCCACTCCTCGACAGCTTTATAAATCTTCCAACATGACTCAGCGCTGGCAAAGAAGGGAAATTTCAAACTTTGAATATTTGATGTTTCTTAATACTATAGCAGGACGGACATACAATGATCTGAACCAATACCCCGTGTTTCCATGGGTATTAACAAACTATGAATCAGAAGAGCTGGATTTGACTCTTCCGGGAAACTTCAGGGATCTATCAAAGCCGATCGGTGCTTTGAACCCAAAGAGAGCTGTGTTTTATGCGGAGCGCTACGAGACCTGGGAAGATGATCAGAGTCCTCCCTACCATTACAACACACATTATTCTACGGCAACATCCACCTTATCCTGGCTTGTTCGAATCGAACCCTTCACAACCTTCTTCCTGAATGCAAATGATGGAAAATTTGACCATCCTAATCGAACATTCTCGTCCGTCGCGAGGTCTTGGAGAACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAATTCTATTACCTTCCGGAGATGTTTGTCAACAGTAATGGATATAATCTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCTTGGGCAAAAAAACCCGAAGACTTTGTACGAATCAACAGGATGGCCCTGGAAAGTGAATTTGTTTCTTGCCAACTCCATCAGTGGATTGACCTTGTATTTGGATACAAGCAGAGAGGACCGGAAGCAGTCCGGGCTCTGAATGTTTTTCATTACCTAACCTATGAAGGCTCTGTGAACCTGGACAGTATCACTGACCCTGTGCTGAGGGAGATTCCAGAAGCTTATTTCATTAGAGATCCCCATACGTTTCTTCTTACAAAGGACTTTATTAAGGCCATGGAGGCACAGATACAGAACTTTGGACAAACGCCATCTCAGTTGCTTATTGAGCCACATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTTCCACAGAGTCCACTCATGTTTAAAGATCAGATGCAGCAGGATGTGATCATGGTGCTGAAGTTTCCATCAAACTCCCCAGTGACGCACGTGGCGGCCAACACACTCCCCCACCTGACCATCCCTGCGGTGGTGACGGTGACCTGCAGCAGGCTGTTTGCCGTGAACCGATGGCACAACACAGTAGGCCTCAGAGGAGCTCCAGGTTACTCCTTGGACCAAGCCCATCATCTTCCCATTGAAATGGATCCACTAATTGCCAATAACTCTGGTGTGAATAAACGGCAGATCACAGACCTCGTTGACCAGAGCATACAAATCAATGCACATTGTTTTGTGGTCACGGCAGATAATCGCTATATTCTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACAGGGAAGCTAACTCAGATTGTATTCGGCCACTGGGACGTGGTGACATGCTTGGCCAGGTCTGAGTCGTACATTGGTGGGGACTGCTACATTGTGTCTGGGTCTCGCGATGCCACCCTTCTGCTCTGGTACTGGAGCGGGCGACACCACATCATAGGGGACAACCCGAACAGCAGTGACTATCCTGCTCCAAGAGCTGTCCTCACGGGCCATGACCATGAAGTAGTCTGCGTTTCTGTCTGTGCAGAACTTGGACTTGTTATCAGTGGTGCTAAAGAGGGCCCTTGCCTCGTCCACACAATCACTGGAGATTTGCTCAGAGCCCTCGAAGGACCAGAAAACTGCTTGTTTCCACGCCTGATTTCTGTTTCCAGTGAAGGCCACTGTATCATCTACTATGAACGAGGGCGATTCAGCAATTTCAGCATCAACGGAAAACTTTTGGCTCAAATGGAGATCAACGATTCAACACGGGCCATTCTCCTGAGTAGTGATGGGCAGAACCTGGTGACCGGAGGGGACAATGGTGTGGTGGAGGTCTGGCAGGCCTGTGACTTCAAGCAGCTGTACATTTACCCTGGCTGTGATGCTGGCATTAGAGCAATGGATTTATCCCATGACCAGAGGACTCTGATCACTGGCATGGCTTCTGGTAGCATTGTAGCTTTTAATATAGATTTTAATCGGTGGCATTATGAGCATCAGAACAGATACTGAAGACAAATGAAGAACCAAAAGCCAAGTTAAAGCTGAGAGCACAAGTGCTGCATGGAAAGGCAATATCTCTGGTGGAAGAAAAACTCGTCTACATCGACCTCCGTTTGTACATTCCATCACACCCAGCAATAGCTGTACATTGTAGTCAGCAGCCATTTTACTTTGTGTGTTTTTTCACGACTGAACACCAGCTGCTACCAGGCAAGCTTATATCATGTAAATTATATGAATTAGGAGATGTTTTGGTAATTATTTCATATATTGTTGTTTATTGAGAAAAGGTGGTAGGACGTGTCACAAGAGACTTTTGACAATTCTGAGGAACCTTGTGTCCAGTTGTTACAAAGTTTAAGCTTTGAACCTAACCTGCATCCCATTTCCAGCCTCTTTTCAAGCTGAGAAGAAAAAAAAAAAAACCACGTTTGATACTTTGTACATCAGATGCATCTTATTTAAAGGGATACTTTTGTAAAAGTAAAACCTTGTATAAAGAACAAAACGTTTCTTAATTTTATTGTGGAGTTACAACTTGCATGTTCTTTAATCCCTATGTCTTGATGGAACAGGCGCACTGACAGTAGGGAATAGTAAGATCTGTCCAAGGACACCGTTTGTATGAAAGGATTGAATTTGGGCTCAATCGATAATTTTTCACATTTTCACCAAAATATAGTTTGCACTTTTTAATCTGAATTCCATCCCTCTACGTGAAATTTGCTCATAAAGCATTTGGATACTAAGCCATTATTTGCCATTTTTTGGTACTTTATACAAAGAAAATTCAGCCCTACCCTTCATAATTTGAAGACACAGCAGAAAGGGGGCTTAGGGATGAGGTCCTGGTTTTATTGTATAAATAGGAATCCCGATTGTTAGTTCCTTAGTGATGACTTCCCAACTCCTGGACAACTCTTCCAGACTCATCCTGCTGGCTTAGCGTGTGTACATTAGGGGAGGAGATCTGATGCTAACTTTTTTTTTTTTTTTTTTGCTGTTTTTTTAATTTTTCTCTCTCTTTGGTTCTTGAATAGCTTAGTTTCTTTAATAAATAAGTCAGACTTTATTATAACAATAACTGAAGTTATTCTTTTAGGTTCTTGTGAAATTCTCACCTAAAGCCACATTCTTAGCCTAAGGCAATTCATCTTTTATGATATAAAATGACGCTATCAAATGATTTTCCATACATTGTACTGATCAAGTTATACACCCAGGGGTATATACACTTTATTCATGTTTCTTCTTTGTATATTTGGTGACCGTATCGTCATAGATGTACATATTGTGTCGGTAGGGCTATGAGGCATGTTACAGGAATGTAATTTTCTCAGAACTTACACTCACTTGCAGTCATTTATTTAAAAAGATAAAACAAGATAATGGGTTCTTTGTATTGGCACTTTGCACCAGAAACATATCATTATTTATTGATGTGATTACTTATTTGTTATCCACCTTGTACTAGTAAGTTTTAGCACTGAATTCCTTCTTCATTGTTGTTTGTATTTATGAGATTCTGAAATTCTGGGGAATCGGCGTAATGATTAAGTTATTCATCACCAGGCTGTAAGCAATATCTTGAGTTTGTAGCTTAGAATTGGGAGGATAATGAACATCTGGAAGACAAGTTCATTTCATCTTGAGATCATGGTGAAATATTTTGGATATATAAATTCCTTAAGCTATTGTAACCATGTTTTATTGCAAAGATGTAAAATATGCCAGATGTGTGTGAGTTGGAAATCAAAAAAAG EMBV3_06423 GGCTTGTTATTCTTAAATTAATATTCTTTTAGTCCATCACCCTATCCCTTCTCCTGCCCC Gene GeneID:531673|CASC3:NM_001098069:154_cdna Constitutive 2 NULL GeneID:531673 19 GENE CASC3 NULL cancer susceptibility candidate 3 EMBV3_33339 CTTGTCGTCAGTATCGGTGCTCAGGGCTTGGTCCCTGGGATGCAGGAGATTCTGCTTATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00628 CTGCATGTAGCTGATGGCATGGTGGAATTCTTCAGATTGTTATTGTTGTCGTCTTGTCTG Gene BVV0101_036088 - 1 EMBV3_36601 GK000014.2:44187673-44969001 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13094 CCCTTCTTCCTACCATAATGATGCCCGAAGTAGTTTATCTGCCTCCCTCGAGCCCGAAAG Gene GeneID:536906|PPFIA2:XM_002687191:87_cdna Constitutive 0 NULL GeneID:536906 5 GENE PPFIA2 NULL protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 EMBV3_26450 AATGGAAGCAGTAGTGGCAGTAACAGCAGCCTTGTATCCTCCAACAGCCTAAGGGAGAGC Gene GeneID:509231|PIAS1:NM_001075396:101_cdna Constitutive 1 NULL GeneID:509231 10 GENE PIAS1 NULL protein inhibitor of activated STAT, 1 EMBV3_13489 CCCAGTCTGTCTCTGCCATTCTGTTTTTATAAGTGGCTACACTTGCCTTCCGAGTGATTG Gene GeneID:538005|LSM12:NM_001076098:263_cdna Constitutive 2 NULL GeneID:538005 19 GENE LSM12 MGC142622 LSM12 homolog (S. cerevisiae) EMBV3_29956 GGGTGAAAGGAAGAAAGAAGACGCTTTGTCAACGGAGATACAGAGGCAGTGTGAAGGCAC Gene GeneID:100296529|LOC100296529:XM_002699622:13_cdna Constitutive 0 NULL GeneID:100296529 X GENE LOC100296529 NULL hypothetical protein LOC100296529 EMBV3_40591 GGGTCTGGAACAGCAACAAGCATCCAGCACTTGCAGAAATAAATCCGAACCATCCTTTCC Gene GeneID:534141|AVL9:XM_002686833:25_cdna UTR3_Alt 2 NULL GeneID:534141 4 GENE AVL9 NULL AVL9 homolog (S. cerevisiase) EMBV3_24612 GTACCCAGTCCAAGGAGGCCTTTGCCATTGGTGCTCACCAGGCAGCAGCAGGAGCAGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14325 AGCTCCTTCATCAGGCCAAGGGCCTCGGCAAAGTAGCAGTGCCACCATGGGTTGATAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38808 AGACGGTGGTGACCAGCACCACAGAGCCCAGCCGCTGCGAGTACCTCATGGAGCTGATGA Gene GeneID:338067|PRKCSH:NM_176662:288_cdna Constitutive 0 NULL GeneID:338067 7 GENE PRKCSH MGC129131 VASAP-60 protein kinase C substrate 80K-H EMBV3_36935 TCACTGATAACTTTTGGGGCCTGGCTTGCTAAAGACCTTTCTCAGGTGACTCTAATGCAC Gene BVT0102_177310 + 1 EMBV3_04671 GK000015.2:17760976-17797407 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07598 CCCTCACCGGCCACCTGAGGACACACTCCGTCATTAAAGAAGAAACTAATCACAGTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30153 TGTCCCACCCCGCGAGAACACTTTACAGCGACGAGGAGATTCGTTTCCAAACCAGAGAAA Gene GeneID:510873|TCF21:NM_001014899:5_cdna Constitutive 0 NULL GeneID:510873 9 GENE TCF21 MGC129111 transcription factor 21 EMBV3_09222 GCAGGAACCAGCCCATCAACATGAACCATTATGCCAACAAGAAGAGCGCAGCTGAGAGCA Gene GeneID:509375|NINJ1:XM_002685553:166_cdna Constitutive 0 NULL GeneID:509375 2 GENE NINJ1 NULL ninjurin 1 EMBV3_16912 TGAAATCTGTGGCAAAAGCTTCACCAGCCGCCCCAACATGAAGAGGCACCGTAGGACTCA Gene GeneID:511703|ZNF652:XM_002695904:243_cdna Constitutive 0 NULL GeneID:511703 19 GENE ZNF652 NULL zinc finger protein 652 EMBV3_14543 ATCATGTCTGTGAGTTCATTTTTAAATGTACTTGCTCAGCTCACCACTGCATTTCAGTTG Gene GeneID:783373|RAB10:NM_001101288:267_cdna Constitutive 2 NULL GeneID:783373 11 GENE RAB10 NULL RAB10, member RAS oncogene family EMBV3_00417 AGAGAGTAATCTTTGCCTGACCTGGCTGTAGAGGAGATACGGCCTCCTTGAATCAGCATC Gene BVT0102_096031 + 0 NULL GK000011.2:11219351-11221414 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026946 TCONS_00026944 TCONS_00026947 1 XLOC_015150 Coding TCONS_00026944 XLOC_015150 Coding Coding NOTO 11:11219484-11227169 j TSS19216 2316 1 TCONS_00026944_1 90 0.0643350604490501 3 0.698984903695992 0.00494497138298723 0.00446968139112264 0.00604509878120876 0.00211016189032784 0.00261030641773921 0.000979056702527502 0.00325090781663371 0.0025189218891288 0.00310687047681899 0.000887566025210143 0.000835903342513861 0.00052801517273382 0.000567056431619001 0.00192149425795573 0.00176262256055349 0 0 0 0.00585810682915114 0.00388127968639326 0.003380487984212 0 0 0 0.00589458499850761 0.00509283741703514 0.00328053467676929 0.000153449446380347 0.000339216603044404 9.60498285579219e-05 XM_002700715.2 NOTO PREDICTED: Bos taurus notochord homeobox (NOTO), mRNA. 0.0 2378 100.00 0.568652849740933 NM_001134462.1 NOTO Homo sapiens notochord homeobox (NOTO), mRNA. 7e-147 526 77.71 0.288428324697755 TCONS_00026944_1 sp|Q5TIS6|NOTO_MOUSE NOTO_MOUSE Homeobox protein notochord; 1e-41 140 75.28 0.977777777777778 1 noncoding 0 0 0 0 -2.42357493821339 0.0310118801444912 0.0350970686407271 0.497969716312777 GACCCAGACCAGGCTTGGAGCTGGTTCACTGCCTAGGCCTCTGGGATCCCCGAGACTGGGCCCAAGCTCAGGACCTTCAGGACACTGAGAGATCCCCAAAGAGGATTCGAACCATGTTTAACTTGGAGCAGCTGGAAGAATTGGAGAAAGTGTTTGCAAAACAGCACAATATAGTGGGGAAGAAGAGAGCCCAGCTGGCAGCCCAGCTCAACCTTACAGAGAACCAGGTGAGGGTCTGGTTCCAAAACCGAAGGGTCAAATATCAAAAGCAGCAAAGGCTGAAACTGCCAGCTGCATCTGCCATGGCTGCCTCTCCAGACGAGCCCTCCAGCAGCTCTGACACCAGCATCCAGAGAGAAGATGCGGAGTCAGGAATGGACAGCTGAGGACTGCAACAAAGGCTCAGTCCAGGCTGGGCTAGTTCTTCCTGGAAGCACCCATCAGATCTCCTTGTTCCAATTCTTAATGAAGAGCTTGTCAGGTCAAAGGGCATCAGGAGAATCTGAACTGTAAAGCAGGAGCCCTCTTTTTCTGTATTGACCCCTGGGAGTTGTAATAATGCAAATAGTCACAGGTACAGACTTTGGCCTTCAGCTATGTCCTTGGCCAAGTTACTGAATTTCTGAGGGTTTTTTCCCCCACCTGTAGAATGGGTATGTTGATAACTTTGACCTCCCAGGGCTGAGATGATGTCTGTAAAACACTTAAGAGTGTGCCAGGCTCAACACTAAGTGTGCAGTAACTACTAAGGCTTATAGGTCTCCTTCACCTGTGGGAGTAATACCTCAGCCCCAGCCTCTCCAGAGAGTAATCTTTGCCTGACCTGGCTGTAGAGGAGATACGGCCTCCTTGAATCAGCATCTGGGCATTGCAGACTCTTCCCCACTGGAAATGGTGGAATTGAGAGCAAAGAAGGACGGATAGACCATTTAGCCCACTGCCTCTCACAGAATTTCCTGAAGTTTTTTAGTTTTGTCTGAACTGTTACCAGTCATAGAAGGAACTCAGGCCCAGCTGCCCCCTTGGAGCAGACATGCTATCCTGAACACCATCTTTTTCCCTCTAGCTACTCAACTTGACCCCCTAGCCATCTTTATTTCGAGTAAAGAGATTTAACTGTGCCTTTGCCAAAACTGGCATTTTGCCTTGAACTCTGCTGTATTATTACCCCAACCCCTTCACAACCAGTTCTCATGGCTTCCATTCCTTCCCGGGAACCACTCCGTTTCTCTCCAATAAGTGTATGTTATAGCCTCCGCTTGTGGAGTCTGCCACCAACATTTCCAGAGCTAATTTCTCTAGCACTTCACATTTCCTGGTGGGCCTCTGTTGAGGGTACTCCCTTAGAATACAGGATGACTTCTGGGTGTTGAGATGAGCTGGTGGAAGGAGGTGTGCCCTGCCACCTGGTGGCGAGGGAGGGCACGGTCCACGCTGCTCTTCAGAGCTCTTGAGGGAGGGAGAAAAGGCGGGAGCAGCGGTCCTTGGAAAACCATCTGTCCCTGAGGCAGTGGACCACCGTCTCGAGAATACCAGGCTGCAGCTGGAGGGAGGGGGGAGGCCACGGTCCAGCTTCAAGAACCTTCTGTTCCCGTCTTCCAGGAAATCCTTCCTAAAGCTGGATCCAGTCAACTCTATTAAAGGAACACAGCGGCAGGTGCCTCTTCCTGGAATCGTTGGCTCCCGTTTTTTAAAAAATCACCAGTCAGTTACCTATTCAGCAGTTAACCGGCTCTATCCAATCCCTAAATGTCACCATGAGACTACAGCAGATGTGGACACAGGTCTTATGTCAAGTAGCACAGGATCAATGGGAGGAGGGAACAAAATGAGAGACGGGGGTCAGGCCTGGCTGTGGGGACAGATGCTACAGGTCAGTCCTGAGCAAGAGACCAGATCCCTCTCCCATAGTCAGGACAGTATGCATATGCAGACTCACTTCCGCATACAACTTCATGGTCCTTAGACCCTCCAGCATCCCCCAGGCTACAAGGTCCCTATGCCCCTGCAGCGTCTGAGTAAGACACACTTCCAGCTTGATCTTTCACAGGACTGTCTGCCCCCTGCCAGAGTGCCTGTGGAAATAGGAAATCTTACGCTGGACTTCGTAGGCTGGCTAAGAGTGGTAAGCTAGCTCTTCCCCTTAGGCTGAGTCCAAACAGCGACTGACAAGACAGGCCACTGAGAGGCAGAGACAACAGACACAAACAGGAATTCAGACACAGATACACACATCAAAACGACACACACAAACTCTGGTATGGCCACGAAAATACAGGCAAAACTGCACAGATGTAAAAGCACAAAGACCACTCG EMBV3_07283 ATCCGCAACGACGAGGAGCTCAACAAGCTGCTGGGCAAAGTCACCATCGCTCAGGGTGGT Gene GeneID:529277|LOC529277:XM_002697466:98_cdna Constitutive 0 NULL GeneID:529277 23 GENE LOC529277 NULL similar to histone cluster 1, H2ag EMBV3_05010 GATCGCCGGCTCCGTGGAGGCGGTGGCGAGGAGTCCGCTCGGAATTTGATCAGATCGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27964 CATCATCCCCAGAATCCATGTGTTCCTGGCCCACTCTGTAATAGCTTAATAGAAATAACC Gene GeneID:281751|EIF4E:NM_174310:2_cdna Constitutive 2 NULL GeneID:281751 6 GENE EIF4E MGC134278 eukaryotic translation initiation factor 4E EMBV3_43712 CAGAAGCGGCCCTGGCCATCGCGGGCACCCGAGGAGTGTGGGGACACGGCGCTGTCCTCC Variant GeneID:510304|LOC510304:XM_002699230:179_cdna 619^675 1 EMBV3_09592 GeneID:510304 29 GENE LOC510304 NULL similar to nuclear factor related to kappaB binding protein EMBV3_35101 CATGGGCATCGACCGCGTCACCATGTTTCTCACAGACTCCAATAACATCAAGGAGGTGCT Gene GeneID:509624|KARS:NM_001034356:85_cdna Constitutive 1 NULL GeneID:509624 18 GENE KARS MGC127504 lysyl-tRNA synthetase EMBV3_33286 GAGCCGAGCCGCCTCTGCTTTTCGCTCTAGTGGCTAAGTTGAAGACCTGCCATGACAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43536 AATTGAACACCTTTCTGAGGAACTGGACGCATGGAGAGCTTGCACACAGATTGTCAACCC Gene GeneID:783416|WDR17:XM_002698642:26_cdna Constitutive 0 NULL GeneID:783416 27 GENE WDR17 NULL WD repeat domain 17 EMBV3_28220 ACTCTGGACACTGATCTGGATGGAGTGGTGACCTTTGACTTGTTTAAGTGGTTACAGCTG Gene GeneID:281661|CAPN1:NM_174259:458_cdna Constitutive 0 NULL GeneID:281661 29 GENE CAPN1 NULL calpain 1, (mu/I) large subunit EMBV3_26755 AGAAACGGGAGAATGTCATGTTTGTGCTGCCCCTGCACGGGGGCCACTTGGGCTTCTTTG Gene GeneID:508717|ABHD2:NM_001015549:93_cdna Constitutive 0 NULL GeneID:508717 21 GENE ABHD2 NULL abhydrolase domain containing 2 EMBV3_20854 AGTGTAAGTTTATATAGGGCTTCTCTGGTGCCTCAGCAGTAAAGAATTCGCCCGCCAAGC Gene BVV0102_217016 + 0 NULL GK000004.2:119080242-119119722 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23373 ATCTTACTTTGGGATAAGGGAGGAGGGGATCAGGAAGAGAAGCCCAGGGAAAAGACAGGT Gene GeneID:618107|C8H8orf13:NM_001076494:23_cdna UTR3_Alt 3 NULL GeneID:618107 8 GENE C8H8orf13 C8orf13 chromosome 8 open reading frame 13 ortholog EMBV3_04519 GGTACCCAGCACTGAGACATCTGTCCCTCGAGTTGAAAATGATGTGCAGCAGCAAGAATT Gene GeneID:281666|CCL20:NM_174263:28_cdna Constitutive 0 NULL GeneID:281666 2 GENE CCL20 NULL chemokine (C-C motif) ligand 20 EMBV3_38512 TGGAAGACTATGATCCTACTGTGGAGAATAGATGAGTACAGCATTCTGCCCTATTCATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01579 CAGTGATACTGCAGCTGGCAACCTCTTCACCAAATGCAGGAAAAACTGTGGGAACTAAAT Gene BVT0102_088642 - 1 EMBV3_10545 GK000002.2:88947501-89166307 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08984 AACGTCTTCAGACACACATCTCCAGAGTCAAGGCAAGCGGGGTTCCCAACTGAGTAACCT Gene GeneID:540985|ME1:NM_001144853:62_cdna Constitutive 0 NULL GeneID:540985 9 GENE ME1 NULL malic enzyme 1, NADP(+)-dependent, cytosolic EMBV3_25874 AGGGCATTCCCTTCAAACCGGGCACCTTTGCTTCTCTTCTCTTTACTCTGTTCTGGTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08876 CCCGCGCGGCCCCATTTCCGCTCCAACAAGGGAACTGCTCGCAGAAAGAAGAAGGTGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40740 CTGAGGAAGACCCAGAAGGTGAAGGTGCTGACGGGCACGGGGAACGTGAACGTCATCCAG Gene GeneID:509768|MTG1:NM_001025327:96_cdna Constitutive 1 NULL GeneID:509768 26 GENE MTG1 NULL mitochondrial GTPase 1 homolog (S. cerevisiae) EMBV3_16122 CAAGAACCACCTGCAGCCTCCCAATCAGCTAAAGTTGGACGTCGCTGCTGTCTGCATGTT Gene BVV0102_147154 + 0 NULL GK000025.2:10359488-10417664 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19654 AGCTTCCGGTGACTGAACCTGACATCAACAACAGGCTGGAGTCCTTGTGCCTCAGTATGA Gene GeneID:540852|SAMD4A:XM_002690947:293_cdna Constitutive 1 NULL GeneID:540852 10 GENE SAMD4A NULL sterile alpha motif domain containing 4A EMBV3_39005 TTAAGTCTCATTTGGATTTGCATTCGAGCTGAGGTTCAAGACCAGTGGGTGACTGGCTGC Gene GeneID:100336180|LOC100336180:XM_002689376:7_cdna Constitutive 0 NULL GeneID:100336180 7 GENE LOC100336180 NULL nicotinamide mononucleotide adenylyltransferase 2-like EMBV3_38215 TTGGAGGTACTGACCGATGCTGCCGCCAGGACCTGGAGGCCAGGGAGCGGCAGGCCCAGG Variant GeneID:524795|DNAJC17:NM_001046276:166_cdna 220^307 3 EMBV3_37678 GeneID:524795 10 GENE DNAJC17 MGC137242 DnaJ (Hsp40) homolog, subfamily C, member 17 EMBV3_09000 ACTCTTGGGATGCAGCCGACATGTTCAAATGTTTGAAATCCCACAATGTTAGACCAATTT Gene GeneID:617316|ELAVL1:NM_001076454:105_cdna Constitutive 2 NULL GeneID:617316 7 GENE ELAVL1 NULL ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) EMBV3_39748 ATAGTTTAGTGCTTGGCTTCCCTTGTATCAGTGTTGTTCCCACTTGTAGCCTGCTGGGCC Gene BVT0102_051220 + 1 EMBV3_35622 GK000015.2:44530713-44552623 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10558 CCAATGTTGGGAATCTTCATGAAGACAAACTCCTCTTTAGATGCAAGCCACAGAACATGG Gene BVT0102_388231 + 0 NULL GK000030.2:132167165-132323730 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248366 TCONS_00248367 1 XLOC_151576 Coding TCONS_00248367 XLOC_151576 Coding Coding - X:132186858-132254087 - TSS185770 381 1 TCONS_00248367_1 34 3 0.994377342773844 0.000141950930500497 0.000342859080798952 0.000324980799153865 4.60668761395088e-09 0.000228171572687068 0.00029285227105982 0.000260295121095009 0.000467150054244838 0.000809976903677064 4.31964347383616e-05 0 0 0.000211103628044093 5.37105652356481e-05 0 0.000112181756336004 0 0 0.00029923467404631 3.70911541762813e-07 0.00021204200589043 0 2.40781971437597e-05 8.66128470069992e-05 0.001322431386434 2.92757313103707e-05 0.000433452098463576 6.68643716948992e-15 0 0 XR_240879.1 LOC101904497 PREDICTED: Bos taurus uncharacterized LOC101904497 (LOC101904497), 3e-136 488 100.00 0.706036745406824 NM_003159.2 CDKL5 Homo sapiens cyclin-dependent kinase-like 5 (CDKL5), transcript 2e-131 471 89.47 0.942257217847769 TCONS_00248367_1 sp|O76039|CDKL5_HUMAN CDKL5_HUMAN Cyclin-dependent kinase-like 5; 4e-17 75.1 100.00 0.941176470588235 0 noncoding GGGCGGGGTCGAGGGCTTCGATTAGTTGTCGCTGCTGCTGGGGAAGGTAAAGCGGTGACGGCGGCCTCAGGAGCTGTGGGGTCCCCGGCTGGAGGTGGGGAACTCGGCGGGGAAATCATTTAATAATTCACATTAGGACAAATATGTGAAAGTTCCTGCCAACCTGTGAATATTTCTTCCTTCGGACATTTTTTGTTCTACTTACTGTACAACTTTCTTAGAAGTTCTTTTTTGATGCCATGTTCTGTGGCTTGCATCTAAAGAGGAGTTTGTCTTCATGAAGATTCCTAACATTGGTAATGTGATGAATAAATTTGAGATCCTTGGGGTTGTAGGTGAAGGAGCCTATGGAGTTGTACTTAAATGCAGGCATAAGGTAAG TCONS_00248360 TCONS_00248361 TCONS_00248362 TCONS_00248363 TCONS_00248364 TCONS_00248365 s 5' 44750 TCONS_00248360 TCONS_00248361 TCONS_00248362 TCONS_00248363 TCONS_00248364 TCONS_00248365 s 5' 44789 EMBV3_13900 TGCGTTGCAGACAGAGGAGAACTCAGCGGTGGCCAGGGGACAAATAACCATGAGACGGTT Gene GeneID:784026|LOC784026:XM_002689536:193_cdna Constitutive 0 NULL GeneID:784026 8 GENE LOC784026 NULL hypothetical LOC784026 EMBV3_32500 GCAGTGAGAGCTCCTTAGGGAAGACATTTGGTATGAATTATGGAAGGGGGGCAGACAGTG Gene GeneID:790010|FTSJ2:XM_002698232:842_cdna UTR3_Alt 1 NULL GeneID:790010 25 GENE FTSJ2 NULL FtsJ homolog 2 (E. coli) EMBV3_13562 TTCGTCCTCATAAAGCACATGTCTCTGGAATAGCCAACCAGCCACTAATATTCACTTCCC Gene BVT0102_147066 + 1 EMBV3_37667 GK000013.2:77005010-77351833 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044052 TCONS_00044053 TCONS_00044055 TCONS_00044054 TCONS_00044056 TCONS_00044057 1 XLOC_026107 Coding TCONS_00044053 XLOC_026107 Coding Coding - 13:77347388-77352368 - TSS32458 2437 1 TCONS_00044053_6 128 3 0.511146816629845 0.0002119766062477 0.000464762783418995 0.000441075650478471 6.87358578992453e-05 0.000411703618169531 0.00025655552423417 0.000130038804980427 0.000558095202604854 6.90752279517505e-05 0 2.12633606993724e-12 4.39592684963506e-12 4.27881225091818e-05 9.19029536743807e-25 2.91534073667152e-05 0 0 0 0.000288692588997517 0.00068452298503095 0.000389883427154613 0 0 0 7.47274261300879e-05 8.01648213860041e-05 0.000139672604387605 0 0 0 NM_001192185.1 KIF11 Bos taurus kinesin family member 11 (KIF11), mRNA. 0.0 677 94.05 0.174394747640542 NM_004523.3 KIF11 Homo sapiens kinesin family member 11 (KIF11), mRNA. 5e-149 533 86.73 0.174394747640542 TCONS_00044053_6 sp|P52732|KIF11_HUMAN KIF11_HUMAN Kinesin-like protein KIF11; 5e-47 165 90.00 0.6953125 1 noncoding 1 1 1 1 -0.202488630292327 0.118418289622467 0.0335323763082125 0.506838753328755 GCTCCCCAGCTCTCTGGGAGGGACAGCAAATCAGGCTTCTGGGAGTCTCTGTAGCTAGGAATCCTGTCTCAGTTACACTGTGGAGCTCTGCAGTGTTAACTTGAGCACTGGATTCCAGCACTTTGGTCCCAGCTGTCTCTGGAGACAAGTCATGATGCCCCTATCATCAGCGCAGAGTCGTCTCTAACCCTGCTTCTCTGCATCACCAGCTTTCAGGGAAGCCTCCACGTGCCGACTGGCCAAGCCCTGGTCAGGTCCTTTATTTTCTATTCTCTCAGATTGGGCAAAGACCACAGCTATTCTGTTCCACGGTCTCCACCGTCAGCACAGAGCCTGGATTAAGGCCAGGTGCCAGGGAACGCTCAGGAAATATTTGATGAAAAAGGACACAGAAGAGCTAATGAAGATGAGGAGTTGAGCTGCAGGATTCCCAATTCTCATCTGACTCGATGAGAATTCTAAGACTTGCAGGACCAGCACATGTAGATCCAAAAGGGAAGCCACTTGGAAAGATCTGGAAGCTGGACGAAATAACCAACCTTCTTGTTTCCTCTTATGTTTAGACTTCAATCCAACCATCCATCCCCCAGGAGACGTTCATCAGCTTTTCTGGAAGAAAAAGTTGCCTCCTGCTTACTGTCGGATATCCTCAAAGTGCCAGTAGAAGATTAGTTAATGGAAAGGCTCGGATCTTAGTGCAGCTGATCCCTAGTGTTTGGCACTAGGGATCAGTTTCATGGAAGACAATTTTTCCACAGACCCGGTTGGGAGGATGGTTTTGGGGCGATTCAAGTACGTAACACTTACTGTACACTTCATTATTATTACATCAGCTCCACCTTAGATTATCAGGCGTCAGATCCCAGAGGTTGGGGACCCCGGTTTTAGAGAATATTGGGCTGTATCTGTCACTCCATGGAGATCCTCATTTCTCAATACAGAGGAGCTATGACCCGGAGCAGAAAAACTGAGAACCTGCAAATGTAAAACACACTGGGAGCTTAGGTAGAGGCATCTGAATTAGATCAAATTTTCCCCCCGGAGTCCAATTTGGAGGCATTAATAGTCAGCCCAGTTTTTTAATGATCTCAAATATTTGGTTAAAGAAATGCTATAAATGCCTGTATTAAATCCAGCTGCTGTCATATTTAAAAAATGTCAGCCGGTTGTTTATTCCTATGGCTTGCTCAGAAAGCAACAAAAGCTGGTGACCTATTTTGTAAGAAACTGCACAGAAAGGAACAATATTAAATTAGGTGCCTGTCTATTCCTCCAAGCTACCCCATATTCTTTGCCTCACACTGAAATTCTTTCCCCGTTTATCCACATTGTTTCTTTCTAAGTAAAACTTATTACACAAATTCCCCAGGGCATTTTTTTCCCTTTTCTTTTTCTTTTGACTCTGGTTAAATAAACTATTGATTTTGTTTTCAAGATAATTTAAGGAGGGAGTATAGTTCCGATTTGATAAGTATAACCTTAATGCATTCAGAGTAAACACATTTTAGGGGTTCAATTAAGGCTTAAAAAAATCAAATTGACCAGATGATTGACTGTCATGGGGATGTGGAAGAGCATGGAGCTGCATGGTATTAATAACACAGAGACAAACTAGCTAAAGGGAAGTGAATATTAGTGGCTGGTTGGCTATTCCAGAGACATGTGCTTTATGAGGATGAATTAATACTCAGTTTCCCAGAAGGAAAAAAAAAAAACTAATTTTTGAGAAGCCAACAGTGCTTGTTCTAAATGGGCCAAGACAGACTCCGGGTTTCCAACGGTGTCACCGTTCAAGCATCTGAGCGCCCTGATTCACGTCGCCTCTGACATCAGACTGCCAAAGGCCAGTGGGCACATGGGCCAGAACTGCCTGTTGAAAGCAGCCCGTCTTCTCTTGCTCACATGAGGAAATATCCAGCATCCACCCACTGGTTGCTCTATAAATTGTGCTGTAGCCTCAGACCGAAAGCATTAAAATTGGGTCTCAACGTTTGCATGGAAACAGAAATAGGCAGTGAGAACATTGGCCATTCTGGAGCAGTTGACAAGAGACCTCGGAAAGCTGGAAATATCAATCAGTCCCTGTTGACTCTGGGAAGGATTATTACTGCTCTTGTAGAAAGAACACCTCATGTTCCTTATCGAGAATCTAAACAGACTAGAATCCTCCAGGACTCTCTTGGGGGATGTACAAGAACATCTATCATGGCAACAGTTTCTTCTGCATCTCTCAACCTGGAGGAGACTCTGAGTACATTGGAATATGCTCATAGAGCAAAGAAAGCCTGAGGTTAACCAGAAACTCACCAAGAAAGCTCTGATTAAGGAATATACAGAAGAGATAGAGCATCTGAAACGGGATCTTGCTGCAACTCGTGAAAAAAATGGAGTGTACATTTCTGAAGAAAATGTTAGAGCTATGAGTGGAAAACTAAGT TCONS_00046385 r 3' 212275 TCONS_00046385 r 3' 217254 EMBV3_16593 CAAAAACGGATTCACATTTTGATTGGTGGGAAGGAAAGCTTCGAGGCCGGACTGGCATTT Gene GeneID:534337|SH3YL1:NM_001034607:2_cdna Constitutive 2 NULL GeneID:534337 Un GENE SH3YL1 MGC128888 SH3 domain containing, Ysc84-like 1 (S. cerevisiae) EMBV3_04359 ACACTCTCCAACCAGCTGCTGGGCCGAAAAATCCTACTTGACACACCTGGCCTCATCAGC Variant GeneID:523344|ERAL1:NM_001099022:127_cdna 426^503 1 EMBV3_01341 GeneID:523344 19 GENE ERAL1 MGC157415 Era G-protein-like 1 (E. coli) EMBV3_17313 GTGGCATGCAGGTCAGTGTGTCTACTGTCCACAGCTACAGGGAGTTGTTCAGGAAAGAAT Gene BVV0102_127099 + 0 NULL GK000017.2:56110404-56136320 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06028 TGAGAGTAGGACCGAGGAAGTTTGGAGACTTGGGCCTTTGTGATGCCATGGACTGTGGAT Gene GeneID:509656|PSKH1:NM_001075413:165_cdna Constitutive 0 NULL GeneID:509656 18 GENE PSKH1 NULL protein serine kinase H1 EMBV3_11628 GTGAAAGGCTACAGGCTTCCTCTGCTCCATCTCACCCCAGTGCAAAATTCCAAAGATGGT Gene BVT0102_075269 + 0 NULL GK000010.2:16326492-16901654 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019525 1 XLOC_010204 NonCoding TCONS_00019525 XLOC_010204 NonCoding NonCoding - 10:16411147-16412402 - TSS13415 1255 4 TCONS_00019525_2 60 0.427091633466135 1 0 0 0.000328275985493051 0.000361312180767368 0.000158805170206607 0.000232107200072494 3.13526822017978e-05 4.18210470232469e-05 0.000287488082864978 0 4.91772375033483e-05 0 0 0 0 0 0 0 0 0.000742804952792749 0 3.87025359418354e-05 0.00198672866842335 0 0 0.000259473023649369 6.73670898459604e-05 0.000340811637689169 0 0 0 XR_237004.1 PDRG1 PREDICTED: Bos taurus p53 and DNA-damage regulated 1 (PDRG1), 5e-31 140 74.47 0.175298804780877 0 noncoding 0 0 0 0 -0.334723063682495 0.0414853448852014 0.000940351806398195 0.985323143072613 AATCAAAAAGGGGGGCATTTATTGGAGTAATTGTGAAGGCCAAGGGAGTTCTACGATCAGGTTTGGATGGATCCAGGAGCTGCCAGAGGTTCCTTGAGCTCGGTCTCCCTCCTGCTCCACAATGGTTTGTGCTTTCTTCTCCCTGTGCTGGCTTGTCTCTCCATCACGGGGAGACAGTCTTTTTTTGATAGTCCCTAGTGGCTCAGCCCCATCTAAACCAAAGGGAATGGGTTTCTTCCAGAAGAGAAAGTTTCAGGTACCAGCTGAGTCGAAAGGAGATAGGATTGATGGCAGTTTAAAGTGACTGATGATCTCCACATGGGCCTTGAGTGCATTTTGGGTTCAGATAGAGGTGGAGAAGGGGAGGAGCATCCCTGCAGGAGGGCAGCAGAGTTGTACCTATGGCACAGGCCTGACTGGAACCTTTGTGGGGCCCAAGACAAGAGCCCAAATAGAGGCCACAGGCCATATGGCTAAATATTAAAGAGTCTTAACTCCCACTATCAATCTGTTAAACACACCTCTCTGCTCATCTGGACGCATGGGCCTTCATAATGACCTGAAGGCAGGTTCCTGTTCAGAATTTTCACCATCTTTGGAATTTTGCACTGGGGTGAGATGGAGCAGAGGAAGCCTGTAGCCTTTCACTTTCTCTTTTCACCCCTGACTCCCTCCCACATCGAATAGACACCTCAGCACACACACATCCAAAGTCTGAATCCTTGCAAATGGCTGGCCTGGAGTGCACATGCTGACCCTCCCTATTCACCTTCAGGGGATTGCCTGGAAAGAGGCCTGTGCAGGCTGTGGAAGGAGGCTGGGGCTGTCTGAGCAGTGAATTCTGCAGCTCCAGATGTTGAAACGTGGCACTGAGATAGGCTAAGACCTGAGATTCTCTACTTGTGTGCTTGCACTTGGACAAACGTCTCCTCAAACAACAATACAAAAGAATCTATAAGGGACTACAAATAACTGCACGCATGCGCAGTCCAGGCAATTATGAACAATAAGATACAAAAAGGCCATAGACGAACTCCCATTTCTGAGATGCGGGGAGCAAAAGCAGGGTGCTGTGTGTGATCCCTGCGCTCAGCACCACCAAGGGGGTGGGAGACCACCTAAGCCGCCCCTTCACCTGACCCAGACCCACTGATTCACCCCACCTTTATGCCACTTAAGGAAGGAGGCCGCCCTCCTCAGAGAGTGGAGAGCAAGCAAGGGCGCCTGTTGCCTGTTTTTGACCCATCTGCAGCAT TCONS_00012850 . 3' 84657 TCONS_00012850 . 3' 85911 EMBV3_20542 AGTACACCTCCAGCCTGCCACACTCAAGACAGGACCGCAGAAACCTTCACAGTGGTGTCA Gene BVT0102_049244 + 0 NULL GK000015.2:28286878-28300882 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058644 TCONS_00058641 TCONS_00058643 1 XLOC_036161 Coding TCONS_00058644 XLOC_036161 Coding Coding PAFAH1B2 15:28261174-28291167 j TSS44139 6240 1 TCONS_00058644_3 229 0.169871794871795 6 0.792144571885836 0.00140066956887061 0.00105810251323614 0.0011835683926457 0.0011457605999228 0.00245140468487502 0.000695185916062377 0.00153831351019603 0.00113197016897809 0.00182058121958475 0.000998866559685789 0.000221947039139923 0.00030017276406452 0.00034308308504604 0.00021954290890212 0.000654612938520989 0.00866359935156922 0.0093516665170612 0.0129449135738676 0.0021942269387602 0.001129201636494 0.000663667070646498 0.00343369464531879 0.0025574246539343 0.00563096710607298 0.00182386876542034 0.0014175043745305 0.00136934429548448 0.00111418290303679 0.000202116995547912 0.00303706853923848 XM_005215807.1 PAFAH1B2 PREDICTED: Bos taurus platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) (PAFAH1B2), transcript variant X1, 0.0 7633 100.00 0.678044871794872 NM_002572.3 PAFAH1B2 Homo sapiens platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) (PAFAH1B2), transcript variant 1, mRNA. 0.0 2048 85.90 0.270352564102564 TCONS_00058644_3 sp|P68401|PA1B2_BOVIN PA1B2_BOVIN Platelet-activating factor acetylhydrolase IB subunit beta; 1e-170 474 100.00 0.995633187772926 2 coding 0 0 0 0 -0.419836591993232 0.363101948780678 -0.0143155831703214 0.77067330869278 CAGTCCATTATCACCTCATTTTAAAGATGAGGCCCAGCGAGGCTGGTGATTTGCCCAAGGTCAACCAACTTAGGTAAACCTATTGGTGGACAGGTTTTCTTAGATGCTTTTTATCTGGTCCGGGTCCATGTACCAGATCAGGATCTTCTGGCCTTCAGGTGTAGAATGAGCCAAGGAGACTCAAACCCAGCAGCCATTCCACATGCAGCAGAAGATATTCAAGGAGACGACAGATGGATGTCTCAGCACAACAGATTTGTCCTGGACTGCAAAGACAAAGAGCCGGATGTCCTGTTCGTGGGGGACTCCATGGTACAGTTGATGCAGCAGTATGAGATATGGCGAGAGCTTTTTTCTCCACTTCATGCACTGAATTTTGGAATTGGGGGAGATACAACAAGACATGTTTTATGGAGACTTAAGAATGGAGAACTGGAGAATATTAAACCTAAGGTCATCGTTGTCTGGGTAGGAACAAACAACCATGAAAATACAGCAGAGGAAGTAGCAGGTGGAATCGAGGCCATCGTACAGCTTATCAACACAAGGCAGCCACAGGCCAAAATCATTGTATTGGGTTTGTTACCTCGAGGTGAGAAGCCCAACCCCTTGAGGCAAAAGAATGCCAAGGTGAACCAGCTCCTCAAGGTCTCCCTGCCGAAGCTCGCCAACGTTCAGCTCCTGGACACAGACGGGGGCTTCGTGCACTCGGACGGTGCCATCTCCTGCCACGACATGTTTGATTTTCTGCATCTCACAGGAGGTGGCTATGCAAAGATCTGCAAACCCCTCCATGAACTGATCATGCAGTTGTTGGAGGAAACACCTGAGGAAAAACAAACCACCATTGCCTGACTGGCTCCCGTCAGTGTTACTAGCATCCCAGCCTCCTCAGATCAGTTCTCTCACTGGCACTACAGAATCCTTCTCTTTCTTAAGGCACTTTGCATTGTCGAATGTTCCTATCTAGTGTTTGAAGGGGAGGAGGGATCTAAACTGGTCCTGTACATAGAAGGTTTGTTTTACACAGGAAAAAAATTAGCCAAGGAAGATGGTTGTTTAAATTCATTTGAAACCAGAAGGGGACTTTTTAGTTATATGTGTGACACAGTCATTGAATTATCACTGTTTTTCCTAGGACAACATCAAGCCTAAGTACTGAACAAAATGAAGATGCTTGGCCTTTCTTTGTATGGATTATGTCATATATAATAATGATTAGAATCACACCTACTTGGCTTTAAAACAGATGTTTTTCCAGTTGTTAAAGTTCATTATTTAGTCTTTTTTGTTTTGCTTTACTCATACATATTCTCAATGTTGTAGCAACATATAGCATCAGATTGAACGTGCTTGTCATTCATATATGGGAGATGCTATAGTCACTAGTGAATTTGTTCCACTCTTAATCCTTCCCATGCTTAGCAGTGAAAAATAGGTTTGGCCCCATTTGGGGGACTCTGTTGAGGGTATTATTTTTATGCTGCTGAATATCATGTCTGTAATAGACCCATGCATGCAGCCTTTCCTCTATTCCCCCTCATCCCCTCTCTTTTCTGGGGGTCCTTGTTGACATTACAAGCTTTTAACACATTTTTAACCTAGGAGCTCTGTTGCTGGAAGTGTGAGTCCCCAGCCAGTTACTCTTATGATGATATTACTGGTGTGTAACTCATTCCTGTGTGGTGTTCTGTGCTATAGTCTGTGTAGTGCTGTCCATATTCAGAGTTCTGATTGGTTATGTTTTGTTTCTCCCTTAAAACCTGTTAACAGTTTTTCGTCTTTTAGGGGGAAAAAATTGGAACTCTGTTTCCAACTCCATAAGACCTGGCTTTTTTTCTTGGCTTAGTTTTTAAATTATCAGTCCAGAAAAATTTGGCCTCTTCTCATGGGGAAACAGTGAAACTGCTCTTCAGAATATACACTCTACTTGATCCCCCCTATTTTAGTAAAAAAAAAAAAAAAAAAAATAGGTTTGTGTAACCTTAAGGACTTCTCCTTAATGTATCTTCATCTGTGAATTTCTTTCAAGAGAGCTCTTTGTAATCTTAATGGTTTGATGAGCTACAAGAACTGCCGTTTAAAAAATAATAGGAGCAGGTGGTTTATTATTTAATATACCAATGGAATATATACAAACTGGATCTACAAACGAATACTTTAAACTGGACCAGGTGGATATTGAAGTAACCCATCCAGATGGGCTCTGCAGAGATTCAGCTTAACGTTCAAGTTCAGTAACTAAGGCGTATGTTTCATACTTGGCTTGCAAGGTTCATGGCATTGCTGTTGTGTGTTGGAGGGGGATTTGTGGTTTGTGCTAAGAGCCACATCTGATTGAAAGGGATAGAACTTGGGCAGATTTTTTTTTTTTCTCGTCAAGGCTTTTTCTAGGTATTTTGTGGGGGTTTTTTTTTTGTTTGTTTTTGTTTTGGTCTTTAAAAAAAAACAATTTTTGAATGTATCATGTCTTCATTAACAACTGAAAATATATGTGATGTTTACTAAACTTGTTTAGTATATTAAATTTTCCTTTTTATTTTTAGTAGCCCAGGCTCTTGAGTTTTTCAGGACAGATTTTTTTTCTTAGCTGAGGTATAATTATAGGGAGGAGAATTAATTAAGCCACAGTTTTATGTGTGAAAAGACTGTTTCCTCTCCAGGTCTTTTTCTGTTGTCAGAGGTGGGGGTACGGTCCAAACCCCATTAGGTCACTCCGGCAGCATGTGCTTTTAGCTTCTCTCTTGACTAGGAGTCACATATCCCTTTGTCAGCTGGCCTTCAGCTCCTTTGCTTCTGTGTATAAACCTTGGATATTACTGCATTTTATATTTACCAGAGCTATTCGAGCAATAGTATTTGAACCACTAGCCTTTGAAATAAAAGTCAGCCCCGTTATTAACAGTGCAGATACTGAGTCCACTTGGATTTCTTGCAGCTTTCTTTGCACTGCTTTAGGCAAAAAGTGTTCATCTGGTTTTTTTCATTTGACACCCCAGTTTGCTGCAGTGACAGAACTTAATGCCTAATCTGTAGAGTTCATATATATATATATAAAATATATATACCCACACAAACACATATATATATGAAGTTTAATGAACTGTCCAAGTGAAACATCCTAACTGTCCTTGTGATTAAGGAGCCAGTTTTGCAGGCAGCCAGCGCGGTGTTTTTCTGTTGGTCTCCCAGCACATGCCCATTCCTTTGCCCGCCCATTCCTGCTACACTCGATGGCAGCTGGTGACACCACTGTGAAGGTTTCTGCGGTCCTGTCTTGAGTGTGGCAGGCTGGAGGTGTACTGCCAGAGGTGAGCTGGGGCGTGTTCTGTTCCCCACACATTTCTAAACTGCTACAGGCAGTGTACTGGCTACCACCTCAAGTCCAGACACAAGTCTAAAGCTGAATTTTGTGTCAGTAACCTTAACCCACCGAAACAAATCTTGAGTAGCTCGTATCCTGCTCTTAGGAATTCTGTTGTCATTTAAAAGTAATGTTCAACTTTCTTTTCCTTTTTCATTTGTTTAACCTAGTCACTGTTTACAGCTGTATGCTAAAGCCTGAGATATTGTCTGTGCTGTGGTGTATGAGCATTGCCAATTTTATATTTATTGCAGCAAAAAAGAAACTAAAGATATATGAAAATGAGGAGCATGGCTTTGCTCCTAAATCTGTGTGGGTGCATGTGGGAGAAGTGAATTGGGGTCTCTTCAAAGGAGGCTTTTGGGGGTGGGGTCACCCAGGCTTCTCCTTGGTGTTCCTGCTTGGGGATCACTGCTGCTAGCTGACTGGACCTCCCCAACGGAAGTTTTGTGATTCTGCTTTGGCAAAGTTTCATTGACCAGTAGAACTCATTCTGTTTTAGTGCATATTTCAATATAAATGTAAACATTTCACTCGAACTCACTGTCTTTCTGTCTCCTTTATCATAGCTTGAATTCCAGTGGCAAAAGAAGGGATGGTTTTTTTTTTCCTAATCACAATTAATTAGATACTTTAGTCATCTTGTTTCTTTTCTGTGGAACTGAATGTTCCAGGCTGACCCTCGTCAGGGATCTCCTTGGGGGTGTAGAATGGTCAGCGGGGTGGGATGAGCAGATAGAAGGAATCTTAAGTAGATAAATGGAAACAACTGTCAAATAAAATGTTTCAGATTTGTTAGTACTATCTGGTAGTTAAAAACAATTAACTCTAAAAATTATTAAATTGACCTTTTGATGCTTTTTCCTAATTTCAGTCTTTAGAATTTTATTCACGTTAACTGCCCCAGCTTCCACGGTTTCTCCATTCCTCACGCTAATAATCACCAGTTTTTCTTGTTTACACTTTGGCATATTTCTTTATTGTTGCCCCCAGCTTAAACTTAAGTGTTTCAAATTAATTGGACTATTCTGAGTTTCTGTGCCATCTAGGGAGAAAAGATTCAAGATAGTATTTCCCATATATTAACCACCTAAGCACTTTAGGTGGGTGCATTCCCACTTGACTGTTTGGCCTGGGGAGTTTTCTGTCCTGTCAGAGGTGAGTCATCTAAGTGGTTTGGCTGGGCCTTGAACCCCACTTTGCCTGACTTCAAAGTCCTTGCCCTTGGATTACTCATTCAACCTGGGGTATCTTTTTAGCTCTAGATCCTGATTCACAGTTCATGACAGACAGATTCCTAGTTTCCTTTCAGCTGAAAGTCCTGGGGGGCAGTCTTCTCACCTGCAGCAAGGCAACAGCTTCATCCAGTCTTTCTGCAGCCAATTATACTCCTTTTTGATTCCATTCTCCATTGGCCACAAAATTATTAAAATTTATTTTAAGTGCATTCCCTGGCTATCTGTTTCCCACCTTAAAAACCAGCAGTAGATCTAAATTGTGTTTATGGAGCTAAGCATTTATAGTGGTCCACGTGAAGGTGGTCCACCTGGCTACTGTATGAACATGTCAGTAAGTTCAGATTGGCAGGAAGATATTACTTGGAGTAGTTAAGTGAAATAAGATTTAAAATCGAAAGAAAGGTGTCCCTGGTGGTCCAGTGGTTAAGAATCTGCCTTGTAATGCAGGGGACACTGGTTCGATCCCTGGTCCAGGAAGATCCCACATGCCTCAAAGCTGCTAAACCTGTGCCCCTCCACTACCGAGCCCACGTTGCAGAGCACGAGAGCCAGCTGAGCCCATGTGCCTGCTGAAGCCCACTAACCTTAGAGCCTGTGCTCCGCAACAAGAGAAACAACCACGACGTGATGCCCTCACGCTGCACTTGCCCAAACTAGAGAAAACTAAGGCGTGGCAACGAAGACCCAGCGCAGCCAATAAATAACTATTTTTGAAGAAATCTAAAGGAGGCCTTCCCTTGTGGTCCAGTGGTTAAGAATCTGCCTGCCAGTGCAGGGTCACGAAGCTCTCTCATGCCTTGAGGCAGCTATGGCCGTGTGCCACAACTACTGAGCCCGTGCTGCAGTCCCTGAGAGCCGCAGCTACAAAAGCTCCGGTGCCCTGGAGCCCATGTTCCACGAGAGAAGCCACCACAATGAGAAGCACAACTGGAGAGTAGCCCTCTCACAGCAACTTAGACCCGGCACAGCCAATAAACAAGTTCATAAAAAATTCTAAAGGATATAAAGGGGAAGTACAGCCAATAATAAATGGCAGAATGATGAGTTTCCCAGTGGTCCAGTGGTTAAGACACCGTGTTTCCATTGGAGAGGGCACAGGTTCATCCCTGGTTGGGGAGGTAAGATCTCACATGCTGCCCAGCATGGCCCCCACAAAAAATTGTGTAATACAGTAGGAGTTGCCAGCTTCCACATGCTGAGGGATACGGGTGGGGACCACAATTGCGGGTGAAAATACAGAATGAGAGTTCATGTGAGACCAGGAAGCACAGCCGCGTCCCTTAAGTCCACTGTTGAGCTGGTGTGCGGGTGTATGCTATGGACCACCTCACCCGACTGGGTGAATGGCCTCGGTCTAACAGGGTGGCTGCTGAGTGACGGCATGGACACAGTTCTTTATCACCCTCGCCTCCCCAGGTACTACCTCTTCAGAGCTGTGTGACCAGAACAGGGGTCACTCAGCCCTAAAGGGCCTATCCAATGATTAACACCACCAAGCATGCCAGCGATGATTACAGCGAACTGATAAGCCAATATGATGTTTCTCAGCAACTAAAAGCTTCTATGTTTTTTGTAACATTCACTTTGTCACTTCTAACCACGGTGAGGCTACGATATTGAAATGATTTACTATAAAGG EMBV3_06588 GCCGCGGTGCAGCCGCTGCAGAGCCTTCAGCAGCCTCTCATGATTCAGATTCTGGCCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23929 ACAGGACTACACATTGAACACGTCTGAATCCAGTGACATCTATAGCTTGGGCCCTCTGGG Gene GeneID:100336576|LOC100336576:XM_002695359:27_cdna Constitutive 0 NULL GeneID:100336576 18 GENE LOC100336576 NULL cationic amino acid transporter 3-like EMBV3_27887 GCGTGAGACTCATGCTGAAGCATCCACAAGTAGCATGGAGGTTATGAATGGCCCCCAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24695 GGAAGATTTCTGCATAAAAGTGACAAAATTTTAAGGAGATTTTATGACTGACCAGGGGGG Gene GeneID:520237|SLC22A10:XM_002699321:154_cdna Constitutive 0 NULL GeneID:520237 29 GENE SLC22A10 NULL solute carrier family 22, member 10 EMBV3_16296 GCAAGAAGAACCCCCCAAACCAGCCCACGAAGAAAGCCAAGGAGATGGACAAGGAAGATA Gene GeneID:782483|LOC782483:XM_002687777:26_cdna Constitutive 0 NULL GeneID:782483 5 GENE LOC782483 NULL hypothetical LOC782483 EMBV3_39079 TCTCCAATGTCTCCTCGAACGAGCAAAAGCCGCATGTCCATGAAGCTGCGTCGCTCCTCT Gene GeneID:618573|RALGAPA1:NM_001083525:59_cdna Constitutive 2 NULL GeneID:618573 21 GENE RALGAPA1 GARNL1 MGC142841 Ral GTPase activating protein, alpha subunit 1 (catalytic) EMBV3_14832 CCTGTTTTCTGATGATATGCTTTTCCTGAGGTTTCGTTATATTATCCTGAAGCAGAAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05526 TCTTCATCTAGAACCCAGGGACTCATTGGTCCTCACTGCAGAACTGCCATGGTCTCACTG Gene BVV0101_056550 + 1 EMBV3_21486 GK000003.2:100415214-100419920 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32824 AAAAGTGGAAGATGGGCTGCATGGGAGGCATGAGATACATCTTTTCCTTGTTGCTGTTCT Gene GeneID:100299061|LOC100299061:XM_002699873:91_cdna Constitutive 0 NULL GeneID:100299061 X GENE LOC100299061 NULL hypothetical LOC100299061 EMBV3_24872 CCCTGCCCTAATTCTTGCCTTATACATTCCCTTCTACATGCCTGGTGACGAGTGCACATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27844 CGGCCCCAACCCTCTCAACCCACTGGTCACACGCAGGAGAAAGTCCAGTGGCACCCGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14928 TTCCAGGGTCCTGCAGAATGGAGGGGGCAAATTGGAGAAGACTCCCCTATACTTGGAAGA Gene GeneID:100337286|LOC100337286:XM_002698490:567_cdna Constitutive 0 NULL GeneID:100337286 26 GENE LOC100337286 NULL acyl-CoA desaturase-like EMBV3_19077 AGGGCCATCAGGAGCTGCCCAGCAGAGCTGTATCTTAGGGGTAAAGTTGAGCTTCCATTT Gene GeneID:512187|NUMB:NM_001101951:100_cdna Constitutive 3 NULL GeneID:512187 10 GENE NUMB MGC159835 numb homolog (Drosophila) EMBV3_32215 CTCTTCTGTCACTCGCTGATCCATCTTGGTTAATGCGGACCGAGCTGTCCCTGAGAGTCA Gene BVT0102_158311 + 0 NULL GK000025.2:34779638-34819237 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24040 ATACAAGGCGAACACAAAGCATCGGGATCAATAAATAACGCCACCTGCCAACCTGGGGGG Gene BVT0102_098699 - 1 EMBV3_26030 GK000018.2:53703075-53754943 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35095 AATGCTCCTCCAAGGTAGACATCCGGTGCAAGGCCAACCGGGAAACCGTGGGATTATTAA Gene GeneID:532721|USP42:XM_002698222:812_cdna Constitutive 0 NULL GeneID:532721 25 GENE USP42 NULL ubiquitin specific peptidase 42 EMBV3_04424 CTTTGAATTCCCCTGGTGTTAGGAGCCTTGGCCTGGATCCCTGAAATGATGTGCAAGATC Gene BVT0102_171354 - 1 EMBV3_41765 GK000001.2:73802041-73974239 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34788 GCTTCTTCTGTTCTGCAGTATGGTTATGAGGTATCCCAGGTATCGAGACAGAAGACAATT Variant GeneID:506910|SLC37A3:NM_001075284:589_cdna 789^873 2 EMBV3_19676 GeneID:506910 4 GENE SLC37A3 MGC137963 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 EMBV3_20259 TCCTGGACCAGAGATCAAACCCATGTCCCCTATATTGGCAGGCAGATTCTTAACTGCTGG Gene BVV0102_073671 - 0 NULL GK000009.2:82473799-82549525 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36313 GTTCTGAGTTTAACACTAACATAAATAACCTAAGGGAAGTGCTGAATGGTGTTGGCAGGG Gene GeneID:539650|IGF2BP3:XM_002686716:65_cdna Constitutive 3 NULL GeneID:539650 4 GENE IGF2BP3 NULL insulin-like growth factor 2 mRNA binding protein 3 EMBV3_17749 CACCTGGGTCCCCTGCAGGTGGCTCGGGTCCTGGATTTCTGGACTGGCCACAGGGCACAT Variant GeneID:617210|ETFB:NM_001038582:41_cdna 350^443 3 EMBV3_35911 GeneID:617210 18 GENE ETFB MGC134248 electron-transfer-flavoprotein, beta polypeptide EMBV3_31490 TTAATCCAGTGACTGTCCGATCAATCATATGGTACCGGCTCTCTGACCAGTTTCATGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01373 AATAATATTAATAATGATGAAAGGAGGGCTGGGCCACAGAGACTTGGCCTCTCCCGGGGC Gene GeneID:532327|FGFRL1:XM_002688448:5_cdna Constitutive 0 NULL GeneID:532327 6 GENE FGFRL1 NULL fibroblast growth factor receptor-like 1 EMBV3_06766 CGTTTCCACTGGAGAAGGAAGTTAACAAACACACCCTGGGCTTTGCGGGAAAGAGCTGTA Gene BVT0101_019216 - 1 EMBV3_09799 GK000021.2:55946436-55947479 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121622 TCONS_00121624 TCONS_00121623 1 XLOC_073442 Coding TCONS_00121622 XLOC_073442 Coding Coding ELL3 21:55946521-55950835 = TSS90548 2720 1 TCONS_00121622_1 395 0.0797794117647059 11 0.371898910271273 9.41800548805947e-05 1.70267169460859e-29 8.41112776830467e-05 4.05839736187744e-05 0.000152396290014181 5.02119278080123e-05 1.16698122085591e-05 0.000267107025130234 2.87433815214655e-05 3.98032626690618e-15 2.53596829147794e-24 1.53155188801559e-21 2.49825253081012e-26 0.000125471633685179 0.000395742575418381 0.000156751159797647 0 3.6526341973533e-05 0.000237781937122868 0.000150526065723847 3.8044856604036e-29 2.96623230719365e-05 0.00015169394329539 0.000221489236379192 9.04491084103935e-05 5.75663991401259e-05 1.17397182047441e-05 5.78987126325413e-35 4.76586585648084e-49 3.23456300690963e-39 NM_001046126.2 ELL3 Bos taurus elongation factor RNA polymerase II-like 3 (ELL3), mRNA. 0.0 3173 99.94 0.647426470588235 NM_025165.2 ELL3 Homo sapiens elongation factor RNA polymerase II-like 3 (ELL3), 0.0 1662 80.50 0.640808823529412 TCONS_00121622_1 sp|F1MGG3|ELL3_BOVIN 0.0 811 100.00 0.99746835443038 2 coding 0 0 0 0 -1.36545144422109 0.0106820183338346 0.0558309558793452 0.330476749402339 AGTCCCGCACAGCCGAGGTGGTAGTGGCTCGGGTCTGTGGCTCGCGCTCTACCTGCCCCTGAACCTCGCAGCCATGGAGGGACCCCAGGAGCTTCTGAGTGGGAAGCTCCGGCTCTGCTTCACCCCGGCTGCCCGGACCAGCCTCCTACTGCTCAAGCTCAACGACGCAGCGCTGCGAGCGCTGCAAGAGTGTCATCGGCAACAGGTTCGGCCAGTGATTGCTTTCCAAGGCAACCGAGGGTACCTGAGGCTCCCAGGTCCCCACTGGTCCTGCCTCTTTTCCTTCATAGTGTCTCAGTGTGGCCAGGAGGGCCCTGGTGGTCCAGGCTTGGACCTTGTGTGCCAGTGCCCAGGCAGGTCTGGGCCTAACCGCCTCCACTGCCTGGGTCCACTCAGGGAGCGCCTCACGATTTGGGCAGCTATGGATTCTATCCCAGCTCCATCTTCACTTCAGAGACACAACCGGACTGAAGATGCCAGGGACCGTGAGAGCTGGCAGAATGTGGGAGACTATCCTGAAGCAGACACAATTTCACAGTCACAGATGGGACTAGAAGAGGTGCCAGACCCACTGGCAAGCAGCCAAGGACAGTCACTCCCAGGATCCTCGAGGGAACACATGGCACAGTGGGAAGTGAGGAACCAGACCCTTCTTCCAAACAGAGATCCTGATCAGGCACTGCCTCCCTCTGCTAGCCAGAAACATGTGGACAAGAAACGTCCAGCGCCTGCAGCTATGGTAGAATTAAAACAAAAGAGGCTCAGAACTCTAGCTCCAAGTCCCCTACAAGGACTGCCCAGTCAGGACTTACAAGAGGAAGACTGGGAGCAAGAAGATAAAGATGAAGACATGGGTCCCAGGCTGGAGCACAGTCCCTCAGTTCAAGCAGATTCTGAATCTCTAAGCCCTGAAGAAGTACCAGATTACCTCCTGCAATACAGGGCCATCCACAGTGCAGAACAGCAACATGCCTATGAGCAGGACTTTGAGACAGATTATGCCGAATACCGCATCCTGCATGCTCGCGTTGCGGCTGCAAGCCAGAGGTTTATAGAGCTGGCAGCTGAGATGAACAATGTTCAGCGTGGAACTCCAGAACACAAGGCGCTGGAAGAAAAGATAGTCCAGGAATATAAAAAGTTCAGGAAGCGGTACCCAGGTTACAGGGAAGAGAAGCGCCGCTGTGAGTACTTGCATCAGAAACTGTCCCACATCAAAGGTCTCATCTTGGAGTTTGAGGAAAAGAACAGGGGCAGCTGAAGCTGACACATGGCTCTTTACTCTTGTATGATATGAAAGAAAAAAGCAGCTATTAACTAAGAGGACAGTTGTCTGCTGTTCATATTGCTGAGTCCATAATGGCAAGTAGGAGAGCTGCTCTAGGTTCTTGAGGTTTGGTTTTCATTATTACCATATTTAAATTTTTAGGGCATGGGCACAGAGCCAAGACTCCACAGCTGTGCCCAGGAGTTATCCAGTAATGAAAACTAGGCAAAGTAGCAGACGCTTGGCTTCTCCACCGTTAGTTCAGCCAAGTCATTTTCAAATCCTGAGAAATGACACCGTTTCCAAGACAAGATACCTTGAGAACATTAGAATTTACCTGGTAGCCTCCCTGAAAAAACCTTTGGTAACAAAGCTAAAGGAACTTGTAATACAACAGGACATAATGGGAAAGGGCTTGGGCGTTACCCATGTATTAGAAGTGAATTCTTTTACAAACATGGCTAAAAAAATTAAAACGGATTGCTTCTGTGTCAAGTTTTGTTTTCCTTAAATCCTCCAAGGTAGCGGTTCTCACCCTTGCTTGTGTATATGAACCACTTCTGGGGCTCTCTAAAAAATTAGATCCTTAGATCCCAGCCCAGGTCTTTTTTAAAAAATATGTATTTTATTATTTTATTTGGCTGTGCCGAGTCTTGGTTGTGACATGTGAATTCTCAGTTGCAGCATGTGGGACCTAGTTCCCTGAACAGGGAGATCAAACCTGGGCCCTCTGCATTAGGAACGTTAGTATACTCTCCTTCTCCAAACATGGAGGATGAGGATCACCTGCAACTAGGGCTCCTATCTACAATTATCCAGTAACTCAAAACTATAACTGTAGATAGGATTTGGATTTACCCAAAAAAGGAAGAGGGAAATGGTTCAATTCTTTTGCCAGTCCTATCCTTTTTGTTCCTCACTGCTGCATAAGAAAGTGGATATTTCACTCACAACCAAGGACACTGCCTTTCCCGTTTCCACTGGAGAAGGAAGTTAACAAACACACCCTGGGCTTTGCGGGAGAGAGCTGTACCCGGCACTGTCAATTCCTGAAACAGCTTGAATGAACCCCAACCTGGTGCCACACCCACACAGGGCATTTCTGGGCAAGGAATAGCCCTTGGGAGGTATAAACATGCTCAGCTGCATGGCAAGGATAAATAGCAACCCAACCTTAGGGCATGGGAGGCCAGCAACAGCCCAACAAGAAAGGTCCTTCACCTGTTCTAATCATCAGGCTAGGGTCCTGTGCAATAAACACATAAGGATAGAAGGAGATGAAATTTGGAAATCATTTGCAGGTGATCAACTATGGACCCAGTGCAGACAGCTGAACGGACCATCATGGTAGTTACTCGCCCTACACATAACTATTTAATGAAAATCTAAAATATGGTTCTAGCTGCATTTCAAATGCTCAACAGCAATAGGTATTAGGCAATGAAGATTATAG EMBV3_31412 CTGAACAATGGCTCTGCTTACTGGCACCAGCCTGTTGCAGATCTCTGGGGACCTTGAAGA Variant GeneID:514347|PLBD2:NM_001046170:156_cdna 589^689 1 EMBV3_26240 GeneID:514347 17 GENE PLBD2 MGC134065 P76 phospholipase B domain containing 2 EMBV3_31520 AGATTATCGAAAGGGCTTTTACAAGCCTCCAAAATGATGCTGAGTCCGGACCAAGCCGCC Gene GeneID:525699|NHLH2:NM_001110003:56_cdna Constitutive 0 NULL GeneID:525699 3 GENE NHLH2 NULL nescient helix loop helix 2 EMBV3_20746 CCCACCAATCTTAAGCATCATAATGTGCCCCAGGCTTTATTTTAATAGTGATCTTGATCC Gene GeneID:535814|ZDHHC21:NM_001081534:3_cdna Constitutive 2 NULL GeneID:535814 8 GENE ZDHHC21 MGC155155 zinc finger, DHHC-type containing 21 EMBV3_16072 CCAAGCCCAGGACCCAGAATGGAGTGAAGGAGAAATGGTGTCTTTGTGGTCTGAGTCACA Gene GeneID:513793|EIF3F:XM_002693065:376_cdna Constitutive 3 NULL GeneID:513793 15 GENE EIF3F NULL eukaryotic translation initiation factor 3, subunit F EMBV3_32431 AGCAGCTGGAGGCACAAACCAACTTCACCAAGAGGGAGCTGCAAGTCCTTTATCGAGGTT Gene GeneID:541458|KCNIP1:NM_001013604:20_cdna Constitutive 0 NULL GeneID:541458 20 GENE KCNIP1 NULL Kv channel interacting protein 1 EMBV3_19574 TGCTTTGGGCAACTTAACCGCTTATCCAAGAGTTTCCAGCCCCTAAGCCACTACAGACTG Gene GeneID:100138320|KRTAP24-1:XM_002684598:41_cdna Constitutive 0 NULL GeneID:100138320 1 GENE KRTAP24-1 NULL keratin associated protein 24-1 EMBV3_14812 ACCTCCACCCTCTGACTGAGCTTTGCATGTTCCACTAACCCAGGGAGGTGGCGGGTGGAA Gene GeneID:786966|LOC786966:XR_084580:313_cdna Constitutive 0 NULL GeneID:786966 14 PSEUDO LOC786966 NULL similar to rCG59523 EMBV3_02503 TGACTGGCTAAATTGCCCTGGCGGAAGCCCCAGACTCCTGTAACCCCCCTAACTGGAAAA Gene BVV0102_062080 + 0 NULL GK000011.2:74061375-74103733 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32144 AGTTTGTGCCAGACTACCAGGCTGAAAGTCTGCCTATGATCAGAAGCCACAAGTGGGAAT Variant GeneID:540846|ETV1:NM_001046492:47_cdna 624^753 2 EMBV3_39045 GeneID:540846 4 GENE ETV1 MGC137631 ets variant 1 EMBV3_03842 AGCTGGCCGAGCAGGCTGAGCGATACGACGGTTGAGACTGAGCTAAAGTTAATCTGTTGT Variant GeneID:282125|YWHAE:NM_174491:31_cdna 151^350 2 EMBV3_25410 GeneID:282125 19 GENE YWHAE NULL tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide EMBV3_14138 ATGCAAGTCTCAAACAGCTTAGATGGGAGGGTGGCATTTCTAGTGCTCTCAGGTTTCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29476 GAGCGAGGCCCTGGGGGACAACGTGAAACAAGGGTGCTGGATCTTTACCCTGGACAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39703 TGCAGACTGCTAGCCCATCAGTGTCATCTCCAAGGTGAATTGTGGTGTCACTTTATAAGG Gene GeneID:317697|ITPR1:NM_174841:2_cdna Constitutive 1 NULL GeneID:317697 22 GENE ITPR1 NULL inositol 1,4,5-triphosphate receptor, type 1 EMBV3_15418 TTTATAAGGCGGAGATGACACCAGCCCCCACCTCTCTGGGTGCCTGGCTTTTAAGCTCTT Gene BVV0102_399854 - 1 EMBV3_38899 GK000025.2:1492438-1503558 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07373 CCCCATCCCAGGCTTCGAGAACAGCAAAATGTGAAAAGAAACACATCCCACCCGACCTCA Gene GeneID:286808|MDFI:XM_002697236:412_cdna Constitutive 0 NULL GeneID:286808 23 GENE MDFI NULL MyoD family inhibitor EMBV3_16409 TCTCCAGTTCTTATTTTTGGAGAGACGGTGGTTTGTGGCGAGTGATGCTGTGTTGGGGTC Gene GeneID:508668|RIPK4:NM_001100327:9_cdna UTR3_Alt 2 NULL GeneID:508668 1 GENE RIPK4 NULL receptor-interacting serine-threonine kinase 4 EMBV3_07146 GGACTTGCATCCAGCTTCCTGTTTACAATGGGGCTATCTGATGGGTTAGAGTGCCTTTTG Variant GeneID:768033|OSTC:NM_001077092:86_cdna 318^460 1 EMBV3_14564 GeneID:768033 6 GENE OSTC DC2 MGC137612 oligosaccharyltransferase complex subunit EMBV3_37910 GCGGGGATTTGATCCCTTTATGAATCTTGTGATAGATGAATGTGTGGAGATGGCAACTAG Gene GeneID:783499|SNRPG:XM_002695608:11_cdna Constitutive 0 NULL GeneID:783499 19 GENE SNRPG NULL small nuclear ribonucleoprotein polypeptide G EMBV3_20548 TCAGCAGGGGCTCCCCCCACAAAACTACATCTTAGCCCTGAACACCTTTCTTGGCCTCCA Gene GeneID:537193|MGC166429:NM_001102196:7_cdna Constitutive 0 NULL GeneID:537193 7 GENE MGC166429 NULL similar to obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF EMBV3_13723 CTCGCACGGACAGTAGGCTGTGGAGAAGCGCCCCCTGAAGGACTACTTTGCCTGTGAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19286 TGACCCCAAGAAACGTGTGATTTCCCCCAGACCCCCTAGGACGTATATTGTACTCACATA Gene BVV0102_069595 + 0 NULL GK000025.2:33168610-33178160 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145180 TCONS_00145178 TCONS_00145175 1 XLOC_088752 Coding TCONS_00145178 XLOC_088752 Coding Coding LOC524593 25:33119166-33174214 = TSS108849 7325 1 TCONS_00145178_2 329 0.0946075085324232 9 0.867095391211147 0.0007395949319602 0.000321965856551723 0.000145125362917247 0.000166320827079598 0.000246559594791962 2.59064061377661e-06 0.000100136575099527 0.000315584358893257 0.000255560117493128 1.31905126956853e-08 3.47735057595495e-09 1.89069136599678e-06 1.69238979184774e-07 2.72926528157551e-06 4.96599940619415e-05 0.00148081976329926 7.89005564956393e-08 0.00105737324100155 0.000196190846053707 0.000397720489227488 6.08593058657576e-06 9.18325712486342e-09 0.000258833028438815 0.000102462457691893 2.90988169406613e-09 0.000270047553021542 4.33690626090842e-11 5.07566402163833e-06 2.37714765648579e-08 9.9945154945706e-09 XM_002698179.3 GATSL2 PREDICTED: Bos taurus GATS protein-like 2 (GATSL2), transcript 0.0 1.196e+04 100.00 0.905392491467577 NM_001145063.2 GATSL1 Homo sapiens GATS protein-like 1 (GATSL1), mRNA. 0.0 1510 90.33 0.150853242320819 TCONS_00145178_2 sp|A6NHX0|GATL2_HUMAN GATL2_HUMAN GATS-like protein 2; 0.0 667 98.48 0.996960486322188 1 coding 0 0 0 0 0.0285655723715445 0.830547918886359 -0.00678309320774739 0.881214241016273 ACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGCCAAGGAGAGTATCCCGCTCTTTACCTACGGCCTGATCAAACTTGCCTTCCTGTCCTCTAAGACCAGGTGCAAGTTCTTCAGTCTGACTGAGACCCCGGAGGATTACACCATCATTGTGGATGAGGAGGGCTTTCTTGAACTGCCCTCTTCGGAACACCTGAGCGTGGCCGACGCCACCTGGCTGGCCCTCAATGTGGTGTCTGGCGGCGGCAGCTTCTCCAGCTCCCAGCCCATTGGCGTGACCAAGATCGCCAAGTCGGTCATCGCCCCACTGGCCGATCAGAACATCTCGGTGTTCATGCTTTCCACCTACCAGACGGACTTCATCCTGGTGCGTGAGCGGGACCTGCCCTTCGTCACCCACACCTTGTCATCAGAGTTCACCATCCTGCGGGTCGTCAATGGCGAGACGGTGGCGGCTGAGAACCTTGGCATCACCAACGGCTTTGTGAAGCCCAAGATGGTCCAGAGGCCCGTCATCCACCCACTGTCCAGCCCAAGCAACAGGTTCTGTGTCACCAGCCTGGACCCCGACACGCTGCCCACCGTTGCCACACTCCTCATGGACGTCATGTTTTACTCCAACGGAGTGAAGGACCCCCTGGCATCCGGCGATGACTGCGACCACATCCGCTTCTTCTCCTTCTCCCTCATCGAGGGCTACATCTCCCTGGTGATGGACGTGCAGACCCAGCAGAGGTTTCCTAGTAATCTGTTGTTCACGAGCGCATCTGGGGAGCTCTGGAAGATGGTGCGGATTGGAGGACAGCCCCTGGGATTTGATGAGTGCGGCATCGTGGCCCAGATCTCCGAGCCCTTGGCTGCCGCAGACATCCCCGCCTACTACATCAGCACCTTCAAGTTCGACCACGCACTGGTACCGGAAGAAAACATCAACGGCGTCATCAGCGCCCTGAAAGTCAGCCAAGCAGAGAAGCACTAGAAGGGCCTCTTCCGCTCCTCCCCATCCACCCCGCCCAGGCCTGGGCCCAGCCCCACCCTGAAGACTCTTCTTGCAGTATTTCTCAACAGACTGGAAAACCGGCCCCGGGGCCCCCAGAGGTGGAGTCTCTAGGAGACGCCCCCGATGACTGACCCCGCCAGGCCTGGGACCCAAGCCAAGGCCTCCCCATGCCCTCCTCCTGGCTTCCTGGAGCCCCCAGACCCTCCAGAGAGCACCCCCCCTTCTCCTCCCCCACCCTCACCCCAGAAAATGATGTCCAGGGCTGAGGGAGCTTGTCCGCTGACCCACCTTCTTGTCCAGCCTCACCCACGGCCGAGGGCAAACGCCGAAGGAAGTTGGTGCCTCCTACGGGACACTGGGGTACCGATTGTCATGTCATCTTGGGGGGCTTGCCGAGCAGGGCCGAGTTCATGGAGCCGGGGAAGGCCCTTGCGAGGGCGGGGGCTCTGGACCCTGTGGTCGCTGGTCTCTGGTCCCATCGGCTCTGGGCTGGTCCCTGCAGAGTGGAGGCCAGTGGGCAGCCCTCTAGTCCTGTGCTGGTGAGGCTCTAAGGGAACACGGGTGGGGCCCTGAGCTGGGCGGAGGACCCCGGCCACCCAGAACCTTCCTTGGCTGCCAACCATAGGGCCTGTACCCCGACTCCAAGCAAGACTGCCAAGGGGGCCCTGTCCAGACCCTCCCCACCACAAGCACTCATCCTGGGGGTTGAGGGGGTGGTTCCCAGGAGACCCACCAGCCTAGGGCAACAGCTCCTATCCCCTCTGCTTTCCCTGGACTCTCCTGGGGCCGGCAGAGCCTCGGTTTTCCCCAAGTAGGGGCGTCCCCAGCATTCTGAGCTGGGGTTTTCTTAGGTCACCCCCACCTCCCCAGCAATCAACGAGACCAGCAGAGGGCTCCCCCGTCATCCTGCCCTCCTCTCTCCCTGCCCCGCTTGTGGGGGAACGTGGAAGGCCCCTGCCCCCAACTCGCCCGCCCGCCCGCCCCTCTGTCCAGGGACTGTGGCGTTCATGAGTACTTGACCTGGGAGGCAGCTTATCTGAGCCTTAATAGAGAAAACCGTTCCTTGTTGTAGTCTCCTATTTAATGTATTTGTTACCCAGGCTGCGGCTGGCAGTAGTTTCAGGGGACAGGGCCTGCTGATGCTGTCGGGACCCAAAGTGTGACATCGCTTGGTGTGACATCCTGTGGCTCCAGGGACAAGCCTGAGAACTGGAGCTGCCACCAGGGGCCTTGGCTTTCCCTTCAGAGCAGGAAGCTGGGAGCAGAGGTCAGTTATGATCCAGGGGTCCCCAGGGGCACCCCACACAGAGCTGCCAAGGCAGAGTGGTTCTAAGCCTCAGAGGAAGGTTTCGACGGGCTGCGGGGAGACGGACAGCCAGGTGGCAGAGCAGCCCCCGCCCCGGAGAGCAGGGCGACCCCCTGCCTCCTCCAGCTGATGGTGTTGTCCGTGTCGTCCCTGAGAAGCTGGGAGGAGAAGGGCCATTCTCTTGACTGGGTGAGGCCCCACCCTGCCCCTTCTCCAGGCCACGTGGGACCCTCTGAGCCCGGGAAACCCACCCGGTGTTGGAGGTGTGTCTCTGAATCCTTACAGATGTTCAGAGCCCAAGCACTGATTCGGAACCCTTTTTTTTTTTGGAAGTCATTTTGCACAAAACTCCAGAACAACCAAAACATGTCAATTGTTTGCTGGTTCCAAAACTGGGGGTGACCACGTGGGCAGGGCAGCCTCTCAAGTCCCGAGCATCCTCTGTGCCTAGAAGGCCTTGATTTTTCTGTGGCGTGCCCTCCAGACCCCTCCCTGTCAGCCCCCTCCCCGTGTCGCTCCCCCACCTCTCCTCCCCGCCGAGCAAGTGTGTCGGCCCCGTGACCCCAAGAAACGTGTGATTTCCCCCAGACCCCCTAGGACGTATATTGTACACACATATAAATACCTGTGTTTTATGTTGATATAGATATATACTGTAAATAGCATATATACTTGAGCAATATATATGTTAATATATACCGTGTGAGCGTGCACACGCGTGTGTGCTGTATGTGTGGGCGTGAGGGCCTCCGCCCCGCTGTGTCTGCCGTGCACACGGGCACGTTTTGAGCCACCGTGTAATTTTAATTCAAGTATATAGGCAATACGATGATCAGAGGAGCCGGCTGGCTGCCTCGGCCCTGACTTGAGAGAAGAATTAGACCAGCATCCGAGAGCAGAGCCCCAGAGTGGGGGTTGAGGGTCCCTCCTCCCTCCTCCCCGAGTTGCCTTTGAAAGCTGGGGTTCAGCCCCTTCAGTTCTGTTTCCAAGGCCCCTGGACGCCCCTTGTTTTATTCTGGGGACAGGGCTGTAAAGGGGAAGAGCGTTTGGGAAGGAACAGCCCCTTCGCCACTGCTCAGCCCAGGTCTGCTTCCCCGCCGCCAGCACCTCCGTCACCTGATTTCCTTCACCTGCAAGGTTAGAAGCCACAGGTTCTTTCCTCAGGTCTCCTCCTAGGGACTGGCCCCGGGTAACTGAGAAAGATGGAAGCCCTGGACGTTGTTTCCTTGAGGGGTTGGTGCAAAGACTTGGCTCTCCCGGTTACACTGGTGTGTCCAACCCACGGGCCGGGAGCCGACACCCTGGGAGCCCCGCCCTGTTCCCCACCCCTCCCCGTCCTCTTGCCATGTGGGGAGGCCGGAGCATCCTCGGTGTCCACGTGCCCGTGAGCCAGCGGCTTGATGTGCAGCACCCTGGGGGAAGAGAAAGTGATACCCCACTGGCTGGCTGCCCCCAGGGGTCTCCAGACCCACAGGGAGGTGGCCCGAAGGGGCCCTGTTGAGCTGAGACACTCTTGGCTCTGGCTCACTGAGCATGGAGCCCTGGAGCTGCCACCAGGGTCCCCCGTGTGTCTCAAGTGTGCGCTGTTCCTTGGTAAGAAGAGCTCAAGCCGTCTCACCTCCCCCCTCACTCCTCGCCTGCGTCATCCGTGAACACAGAGTGAGAGGTTAAGGTAGGGAGAGTGAGGGAGATGGGGAGTGGAGACCGCTGCTTCGCCTCCACCCCCCATTATGAAAATCTGCCCCTTTGGTTCAACACTCAACTTGGGCTCCCCTGGCTCCTAAGAAACCCCTTTCTGCCTCAGCCCCAGTCCTGGCCCAGCAGAGACTCAGCAGTCCTCACTTGACACCCCCTGTCTCCACGGGGGTCTCCAAAGCCCCCTAGTAAGTGGTGCCCTCCCCACTGCCCTCCGTCCAGAGCACCCATCCAAGCAGGAGAGGCTCACAGCCCTCCCTTCCCCAAGATTCAGGGGTCCCAGAGCCCCCCAAGCACCAGCATTCTCCCCCTCCCGTCAGCTCCAGGCCCCAGGCCCCCGGTGGGGAGAGAGGGACCGGGTGACCTGGAGCTGGCCACTGTGACCTCCCCATTCAGGCAGTGCAGCCTTGGTGACCAGAGTGGTGTGTCCAGACCCCTCGGAGGTGACAGAGGAGGAGGCCTCAGAGCTTGGGACAGGAGGCTCCAGGGAGACGGGAAGGGCCAGCCCCCAACCCCAAGCCAAGGGCACCATTTGCCTGATGGTCGAAGATGAACCTGCCCAGCCGCCACCAGCGCCTTCGGCCACAGTTCCCAGCCACCCGGGGCCACCTTTCTGAGTCCCTGGATCTGGATGTGGGCACTACTAGGGCCCGTCCCAGCCCCAGCTTAGAGTGGGGACCGCCCAGGGGGTGGCTGACGAGGGTGTCTTGCCACTTTGCTGAGTGAAAGTGGTGGGGCATAGAAAGGAGGCGCCCCGGTGTGTCTGCCCCGCCAGGGCTGGGGATAGTCAACCTGCCAGTCATGGCCACCATGGAGTTGGTGGTTGGCTTGGCAACCAGAGCTCGGGGGAGGACGACGGGGTCTCCCAACAGTGGAAAGACAGGGGCTTTGGCTTTTCAGGTTTCCTGGATACTGTGCTGAGGCAAGGGCGAGGCTGGAGCGGGCAGTAGCCCTCTATTCAGAGAGGCTGTCTAGGAGGGGAGCAACCAAGATGGCGGATGGTGGCCAGCCCAGCAGAGGGCAGACTTGGGAAGAGTGGCCGGGACTTGTGAGGGGAGTTGAGCCCTGGTATAGCTAGATACCTTTTCTTACACTCCAGTTTCCTTTTCATTTTTCAAATTAGAGGCAGCAAAAGGACTCTCTTCCATAGACCAAGGGAGAAAGCTGTGGGGTGGGCTATGGCCTTCAGCTTTGAAACCCAAACCCTCCAAGAAAGCCTGTTTTCTTGGGAGGGGAGGATGGGAGCTGTGGGCTGAGGCAGCCTCTGTCCTTGGAGCTGAAGGCCTCAGAGTGGCCTGGAATGGAGGTAGAAGCCTGTGGCCTGGCCTGTGGCTTCCAAGGGCACCCTGGTTGGTGACGGGGCTTGTGGCTCTTGCTTCTCGGTCGGGCAGGCTGAGAGTGGGAAGTGTTGGGCATCAGAGCAGAGTTCTGGGCACACGTGTGTGTGTAAAAGTGCATGTAAGTGTGAACATGTGCTGTGCATATGGGAGCACACGCCTGCAGAGCCCAAATTAGAGCAAAAGGACTGACTCGTTCAGCAGTTCAAGGCCTCGGTATATTCTTACTGTGGGCCACATGCAGAATTGAAGGGGTGGGGATGGCAGGCCTTGAACTCCCCTTGACTTTGTTAAAACCGCTCTGGGGAGGAGGCGGGCTTCCCCGGTGCCCCAGACAGCAGTGTGCCTGCAGCACGGGAGACCCGGTTTCGATCCCTGGATTGGGAAGTTTCCCTGGAGGAGGAAATGGCAACCCACTCCAGGATTCTTGCCTGGAGAACTCCATGGACAGAGAAGCCTGGTGGGCTACAGTCCATGGGGTGGCAGTCAGATATGACCGAACTACTAACACTGGGGAGAGGTCAGAGGTGTCCCCATGGGGCTCTGCTCCGCCCTGCAGAGGCCCAGTGGTCCGTGCAGCCAGCCCCAAGGGCTAGACCTGCCCAGCAGACTCCTCAGAAGCAGCCAGCCCTGAAGACAGTATTTACAAGGAGAGGTTCTAGGGGCCAGTGCCCCCTTGCCTACTGGGGCTGATCCACAGAGAGCGTCCCAAAAAGTTGAAGGCCAGAGGGTGGGGGTGAGGAGCTTGTGGAAAACACGCCAAATTCAGGTCCCAGGGCAGAGGCCAAGCCTCGTGCATCTTCCTGTCCACTGCTTCAGCTTATCTGTTCAGAAAGTGATCCAGGGAGAGCTGGGCAGCATTGGCTCCAAAACTGGGGGTGGAGCGGAGGGGCTAACGGCAAACAAAACCCCAGCCCACCTCTTGCTCTTTGCCAAAATCGTTTCCGTTATCCCGAGATGGGGGTGAGTGGATGTTGGCTGCACAGCGGGGTTCAGAGAGGCCGCTGTCCTGCCCAGGGCCTTGCCTTGGGGGTCTGACACGCCCCGGGTCACCAGCAGTACCAGTGGCACTTATATCTATCTGTCCCACGTTCTGGGCGCGGGGAGAACGGAGCAGCCCTGCCCAGGGCCCTCACACTTTCTTTCTTGAAGAAACACAAAACCCTCGAGATTCATGTACTGTATGACGGAGAGAAAAAAAGTACCTAATGTTCCCCCAAAAAAGACAGTATATTTTGTACTTTGTAAAGTGTTCATTAAAATGGAAGAAAAAACAAATGATGTTGGCTAACGGCTGTCTGATTTCATGCTGATCCAGGGCCAAGTCTCCTCCCTCCCTTCTCTGTACCGTGGTTGGGGGAACACCGGCCTGGAGCTGCAAGGAGGCAAAACAAGAATATGAGAGGAAATCGCCCTGAGAGCAAGAAGGGTTGTCTTAATGCTTTGTCACAAGTTGCCCCCAAAGCCTAAGGCTTTAAAACAATCCATTTGTGTGTCTTGGTTTCTGTGGTTTGGAATTTGGGAGCAGTTTGGGCTCAGAGTCTCAGGAGGCTGCAGGCATCTGAGAGCCTCTACTGGGACCAGAGGGTCCGTTTCTAAGGTGCTCCCCTCCACATGGCTGGCGAGACGGGCCTGGCTGCCGGCCTGTCCCCACATGAGTCTCCGCTGCTTGAATATCCTGACAGTAAGTGTTTGGTTTTCCCCAGAGTAAGGGATTCAAGGACCAAGGCAGAACCTTAAAAAAAAAAAAAAAAAAATTGTCTTTCTTCTAGCCTCAGAATTCATGTACCATCCTCTCCACCATGTTCTGTCAGCACTGCAGCTCAGCTCTGACTGAACCCTGGAGGATTCAGTCCACACCACACAGGGGTGTGAAAACCAAGAGGTCAAGGTAACCTTGGGGCCACCTTGGGAACTGGCTGCTACATTCACCATTCCCTCCCCTCAGCCCAAATATCTGGCAGAGGTGGGCC EMBV3_24463 ACGCCAACGGCTACTCAGACCCCTACGTGAAAACATACCTGAAGCCAGATGTGGACAAGA Gene GeneID:785428|DOC2B:XM_002695713:326_cdna Constitutive 0 NULL GeneID:785428 19 GENE DOC2B NULL double C2-like domains, beta EMBV3_25960 GGGGACCATGCAGACACAAAAACCATGAAACGGTATCCTCAGAGTGTTGACAGAAAGCTG Gene BVV0102_307659 + 0 NULL GK000017.2:73453653-73479561 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078274 TCONS_00078273 1 XLOC_047268 NonCoding TCONS_00078274 XLOC_047268 NonCoding NonCoding - 17:73472904-73474663 - TSS58278 462 0.989177489177489 2 0.738339021615472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000377643233116412 0 0 0 0 0.00113741006394389 0 3.27013793272705e-09 0 0 0 2.66228183297993e-05 0 0 XM_005251280.1 SDCBP PREDICTED: Homo sapiens syndecan binding protein (syntenin) (SDCBP), transcript variant X1, mRNA. 5e-07 59.0 75.82 0.19047619047619 0 noncoding 0 0 1 1 0.0151925868465664 0.898552987349581 -0.0692131161945497 0.290394617813786 CCTAATATATGGGTGGTTGGATTCTCCGAAGGAGAGGTGATGAGAGAGACAGAAAAAGTGTTTGAAGAAATAATGGCCCAAAACTTCCCACACTGGATGAAAACTATAAACCCACAGATCCCAAAAGCCAAGTGAACTCCAAGCACAAGAAAATGAGATCCAGGCGTATATCGTAATTCAAAGCCAGTGCTGAAGAGAAAGTTCTCAAAAAACTGCTAGAGAAAAAAAGAAATGTTATAATCAGAAGAAGAAAAACAAGATGACATTTCTCACTGGGGACCATGCAGACACAAAAACCATGAAACGGTATCCTCAGAGTGTTGACAGAAAGCTGTCAATCTAGGATCCAGTAGTTAGAGGAGCAGCTTTTTAAGACGAAGGCAAAATACATCATTTTCAGACATTCGAAGGCTGAAAGAAATCACCAGGAGACCTGCTGTACAAGAAGCATTAAACGATACT TCONS_00078275 s 3' 6218 TCONS_00078275 s 3' 4899 EMBV3_06728 ACCGCCATCGAGGACTGGGACTCCGTTCAGTCCGGAAACCGAAATGTTTATGGGATTATT Gene GeneID:505043|CD320:NM_001166558:24_cdna Constitutive 1 NULL GeneID:505043 7 GENE CD320 TCblR CD320 molecule EMBV3_36043 GTTGCTGGTTTAAAGGCACTGAGGCCGTAGCGTGGTCTTAATAGACATTCCATAGCGTGA Gene BVT0102_133215 - 1 EMBV3_38128 GK000007.2:55791190-55988739 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09139 TTGCCCATGGATGCCTATACACACGGCTGCATTTTACATCCTGAGCTAACCGTGGACTCC Gene GeneID:613472|GDAP1:NM_001101222:67_cdna UTR3_Alt 2 NULL GeneID:613472 14 GENE GDAP1 NULL ganglioside-induced differentiation-associated protein 1 EMBV3_42993 GCAAAGGTCGACTGCAAAGAGCAAATCAGAGACGTCGTTTACTTCCAGGCCAGACTCTAC Gene GeneID:540537|ANAPC5:XM_002694490:353_cdna Constitutive 1 NULL GeneID:540537 17 GENE ANAPC5 NULL anaphase promoting complex subunit 5 EMBV3_40195 CCGCCACTCCTCCGGCACATATGGCTTCCATTGGCCTCCATCTTGCTAGGAAACATAATT Gene BVV0102_107272 + 0 NULL GK000027.2:33245729-33250507 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155495 TCONS_00155492 TCONS_00155498 TCONS_00155499 TCONS_00155487 TCONS_00155491 TCONS_00155500 1 XLOC_094739 Coding TCONS_00155495 XLOC_094739 Coding Coding LETM2 27:33237778-33247358 j TSS116331 1830 2 TCONS_00155495_3 121 5 0.809479068796325 0.00345810467267941 0.00279277672879269 0.00543299028730654 0.00462169885535878 0.00348859482774519 0.00190529300182694 0.00136476907977315 0.00313590737753028 0.00785433462771038 0.000702658347239071 0.000762415824304667 0.000778473490782499 0.00280157957791567 0.00071377875721279 0.00159845882049333 4.54508781561358e-12 1.5388333165476e-11 1.0047190219294e-53 0.00414909956819907 0.00344120490791772 5.12134621552401e-05 2.98055872566355e-36 2.48108232467288e-38 2.0176900481621e-107 0.00123697747206062 0.00195453176785038 0.00182898703322654 0.000160689549377175 6.16665716032386e-11 6.56079179609288e-11 XM_002698739.3 LETM2 PREDICTED: Bos taurus leucine zipper-EF-hand containing transmembrane protein 2 (LETM2), transcript variant X1, mRNA. 0.0 2942 100.00 0.890710382513661 XM_005273408.1 LETM2 PREDICTED: Homo sapiens leucine zipper-EF-hand containing transmembrane protein 2 (LETM2), transcript variant X3, mRNA. 2e-152 544 69.34 0.678142076502732 TCONS_00155495_1 sp|Q2VYF4|LETM2_HUMAN LETM2_HUMAN LETM1 domain-containing protein LETM2, mitochondrial; 5e-43 149 62.14 0.990291262135922 0 noncoding 0 0 0 0 -0.371850163771801 0.150695035183828 -0.0669685338789519 0.318058534470085 GAACTACAGCTGGAGGGAATTAGCCTGGCCTTGGGAACTGTCTTAGGGTGGCTCTGTGACAAAGTGCAGTGCCTTCTGTTAGGTCTGCCTGGAGGCTGGTTCTGGCAGAATGAGTGGTCTGAGCAACCGCTGATAACCTGAACCTTGATGACTCACTTTTGAAGTTGCCTGTTGGGCTCTTGAGAAGGTCTTGTAAGCAGTAATTGCCAAGGAAGGGGTGAATGCTCTGAGTGTGTCAGAGCTCCAAGCTGCCTGCAGGGCCAGAGGGATGCTGTCATTGGGTCTCACTGAGGGGCAGCTGAGACAGCAGCTCACAGAGTGGCAGGACCTCCACCTGAAGGAGAATGTCCCACCTTCTCTTTTGCTCCTGTCCCGGACCTTCTACCTAATAGACGTGAAGCCGAAGCCGATTGAGATACCACTCAGTGGGGAGGCTCCAAAAACAGATATTCCCCTGGGATCACCCACTCCCCCTGAATCTAAAGAGAACACGGCCGGTTTAGCACCTCAACTGAAGGAAACTAAGGCAAAATCAGAAAAGACAACCCAGAACAGCAAGGCTAGTTCGAATGGAGCATAAGGACTCATGGAGGATGGAGCTTACTCTCTCTGGCTTGCTGCCCTCAGCAGTGGCATCTGTAAAGAACGTCCCTGAGATAGAAGATCAATCATTTAGTCCTCAGGGCAGTCTTTTGAGGCCTTGTAACCGTTCAGATGACGTCAGTGGCAAGACCAAGTTCGGATCATTTGGAAAACTATTTAATTGCAAAGTCCATGTTCTCTGTAGCATTAGATCATCCCACTGGACTTTGTGTAAGGCCCGTCTGCCATATTGTTTTTTAGCAACTTCACGTCCTTTTAAGAGAGGAAACTTTTTTGCGCAATGGAATCAGCCTGATGCCTTAAGATACCTCTTGTCTCCTCTAGCTCGGTAAGCCGGGTAGGAACTAGGGAAATTTCAAAGCCAGTCATCACGAGCATTGCACAGGCACTCTCACACTCTCACTGCCTGTACAACTTTTTCAGACTGAGCACACACACACACACCAGTAGGAATAGTGCCCTGGAAACAAAGTACCTTTGGAGATGGGATGGATGTAAAGTCCCTGGTTAGGTCTTCCCAGATCTAAAGAAGAAAAAGCTTCTTAGGGAAGAAGATGGGGAGTTCAATAGACTGGCAATCAGAGACTTGGCAGCCCCCCTCGGGCCTGCAGAGGCTGCAAGGATCTGGGAGGCCGCCACTCCTCCGGCACATATGGCTTCCATTAGCCTCCATCTTGCTAGGAAACATAATTAAGGGCTTAAGACCGAACCATTTGTTTGTGCTGGGTGTGTGTGTTTTTCTGGTCTGTTTGTCTTTCACAAACAAGACTATCTGTTAGTCACAGGTTGTTAAGAGTCTGATACAATCCCAATACTACCCAGGAACAGATATTATGTTCAGATATTTATGTTGGTTATCTTCAGTGTTGTCCACACTGAAAAACCTTAATAATAAATCGATCACCATGCAGCTGACCACCAGCCTTCTTCCTTTGGGGAGTACTTAGAAAGGAAGAGGTGTTTCAGCTGCAGAAATTAGATTTCTGTACTTGCTGTGGAATTGAAGGCAGTTAGATGGGCATCCATGGAACCAAGGAAAACTCAAATCAACCTGTCTGGGGTAATCTAAAAGAGGAATGTTATCGGCACTTGACAGCAAGGAAATGCACTTTAAAACCTTCCCTAAACCTCCCCTCCGCCAAGGGACAAGCCTCACCATGTCCTGTCCTGCTGAGGAACTCTCTGCCATTGGCCTTGGAAGGTGATTCACAGTAAATTTTCCCATTT EMBV3_25858 GAGTGCGCCTGCGCAGCTTTGGAAGCCGCAGAATGAAGAAGAATGGAGGAGAGCAGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41550 AAGGTTTACCAGCACCAAGTGTTTTGCTTTCATGGAGATGGATGAAATTAAACCTGGGCC Gene GeneID:508353|AIDA:XM_002693967:176_cdna Constitutive 0 NULL GeneID:508353 16 GENE AIDA NULL axin interactor, dorsalization associated EMBV3_02599 GATGGTCATCTTACTCATCGCCACCTCTCTGGTGGTGCTCATCTGCTCCATCCCGCTTGT Gene GeneID:282331|PTGER4:NM_174589:62_cdna UTR3_Alt 2 NULL GeneID:282331 20 GENE PTGER4 ep4 prostaglandin E receptor 4 (subtype EP4) EMBV3_28451 GGTGTCATGCTGAATTTAAATGGATGTGTGTTAACCCTCTACAAGTGAATGAGTCCATAC Gene GeneID:100138733|LOC100138733:XM_002691414:391_cdna Constitutive 0 NULL GeneID:100138733 11 GENE LOC100138733 NULL similar to envelope polyprotein EMBV3_06081 AGGGGGTGGAGATACAATTCTTCAGGCCACAATATTGAATTAGTTTTGCAAGCATGGCTA Gene GeneID:529904|GRIA4:NM_001079604:17_cdna Constitutive 0 NULL GeneID:529904 15 GENE GRIA4 NULL glutamate receptor, ionotrophic, AMPA 4 EMBV3_10043 GTCCTATGATACTACCTTCCATGACCTGGTTGTGGAAGTTGCCTTTGTTTGGGTGCACTG Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_28991 AGAACACTTTGCGTTGAGTTTAGACACTATTTATTACCGGGATTACAGGCCTGGCCGCGG Gene GeneID:520376|ELAVL3:XM_002688873:250_cdna UTR3_Alt 3 NULL GeneID:520376 7 GENE ELAVL3 NULL ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) EMBV3_32720 AAAGGTGCTGTCTCTGCTGCCACCTTCACGACAAGGGCTCCACTTGGTCCCAGATTTTTA Gene BVT0102_380487 + 0 NULL GK000002.2:21569966-21688282 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101830 TCONS_00101825 TCONS_00101831 TCONS_00101829 TCONS_00101824 TCONS_00101832 TCONS_00101828 TCONS_00101833 1 XLOC_061769 NonCoding TCONS_00101825 XLOC_061769 NonCoding NonCoding - 2:21634193-21661667 - TSS76002 1200 1 TCONS_00101825_2 82 0.3625 4 0.956466348778801 0.000447839531254936 3.95292863229575e-16 0.000239256415325867 0.000555076136083337 3.36713751183002e-05 3.30044718289173e-35 0.000183070738376576 3.79908319830462e-22 6.01835414611435e-05 0 0 0 5.09379496163397e-06 0 4.0883557449879e-06 0 0 0 2.20862901291425e-18 0.000163587374190741 1.0214039807361e-05 0 0 0 3.39810813243655e-05 3.27187157122572e-12 0.000501461523676239 0 0 0 XM_003585206.2 LOC100850238 PREDICTED: Bos taurus ferritin light chain-like (LOC100850238), 2e-79 300 77.67 0.331666666666667 NM_000146.3 FTL Homo sapiens ferritin, light polypeptide (FTL), mRNA. 9e-66 255 75.19 0.331666666666667 0 noncoding 0 0 1 1 -0.269839715528156 0.084156982730394 -0.165541138834024 0.229958999435629 GAACTCGCCCTGCCCAGCCTGGGGACCAACCAGCGTGTGGAGGGGAGTCACATGGCTGTCATCTTATTGATGTGTTTCACCTGCTTCCCCAGGACTGGGCTCTCTGGGAAGGCACAGAGGTGGGGTCTGGCGGGCAGAACCCAGGGTATGCAGATCCAAAAAAGGCTTGGTTCTGGTTCTTCTCCATGAGAATGGCAGCTCCCATATAGCGTCCTGAGTTTTACTCCATTCTTCTTGGGGTGGCTTCTATGCGTCCTGAAGAGGGCACGGCTGCCCCACTGGTTTTGCATTTTCAAGAGATGATGGGCACGCTCAAGCTTCTCCTTGGCTGATTCATAGAAAAAGTCGTTGACGCCCTCCAGAGCCACATCCTCTCCTTGGAAATAGAAGCCCAGAGAGAGTCTTGATTGACCCACATGCAAAGAGAAAGACCAGTTTGGATTGGGCAGCTGTTTGAATCTAGTGCCAATTACAACATCTTCTCTAAAGGATTATGTTTATTAGGTTGATAGAATATAAATCCGATCAAAAGAGGTTCCCACAAATACGAAAAATTGGATGAAAATATTGTTGGACTATAGTCATTGCCACATCTGGAAACTGTTCATAGGTGCTGTCTCTGCTGCCACCTTCACGACAAGGGCTCCACTTGGTCCCAGATTTGTAACATCATTTTCAAACTCAAAGTTTGGAGTTGATGCATCTGTTTGGCAGACTGGATCAAACACCTGCATCCCATCTTTACAGAAGGCGAGGAAGCTTCCTGGGGCAAAGACTGAACCTAGAATGAAGCACCCCCAAGGCTAGCACAACATCTACAAAAAGTACTGTGCATTTGTAAGATTAAACGACATTCTCAAAACGACCTGTACTCTTTATAAAAGTGTCAAGGCCATGAAAGACTGAGAAACTATCCCAGATTGGAAGAGATTGAGAAGCCTTGACTCTAATCCTGTTTTGGATCCTGAACCAGAAAAGGAACATTAATGAGACAACTGGCAAAATTTGAGTAAGCCCATAGGCTGGTGAATAGTATTTAATAAATGTTAATCTCCTGGTTTTAGTCACTGTACTGTGGTTTTGTAAGATAACATTTGGGATAGGTTAAACTTGAGAGCTTTGATAGCCCTAGGTGCCTCAAATGCCAAGTTATTACCAAGTTCTTAGCAGTTTAATTAATAAATGGTGTTCATGACCACA TCONS_00101835 TCONS_00101836 s 5' 40483 TCONS_00101835 TCONS_00101836 s 5' 67956 EMBV3_34960 GACCCCAGATGGTTTTCTCCACAGCTGTTCCTATCTGGAGAAGGGAGTTCTGGAAAAGTT Gene BVV0102_120382 + 0 NULL GK000024.2:30788166-30850954 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04650 CGGTGCACAGTCAGGGTCAAGCTGCTACAAGACAGCATCTCTTCGCTCCTGAAGTTTGCT Gene GeneID:512910|LOC512910:XM_002692645:150_cdna Constitutive 0 NULL GeneID:512910 14 GENE LOC512910 NULL similar to Uncharacterized protein KIAA0146 EMBV3_09780 GGAGCTGGGCCCTTTCAGGGGCATCACCTACTTTGCTTATGTGGTTCAAGGCTCTGATTA Gene GeneID:512401|METTL12:XM_002699288:224_cdna Constitutive 0 NULL GeneID:512401 29 GENE METTL12 NULL methyltransferase like 12 EMBV3_13747 TTGGCCCTGCGTTCATATCTAGGGACCGAAATGGAGGAGCGCGTGCATCTTTGTCTGGCA Gene BVV0102_088210 + 0 NULL GK000019.2:33813056-33816539 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096387 TCONS_00096391 TCONS_00096390 TCONS_00096388 TCONS_00096394 TCONS_00096389 TCONS_00096392 1 XLOC_057960 Coding TCONS_00096392 XLOC_057960 NonCoding Coding LOC100847567 19:33812978-33816037 j TSS71646 1668 1 TCONS_00096392_2 198 6 0.456507521255723 2.36763758883321e-12 8.40233611169834e-12 0 0 0 9.31334015423416e-14 3.58275956938373e-12 0 1.25106171123233e-05 0.00085946813491845 0.0003078742245573 0.000583352844660222 5.04295417950191e-05 9.04534241861408e-06 0.000372736208660307 0.0111083755969172 0.00371261653549756 0.00331425796736779 7.04065122558134e-10 3.00376986225328e-20 0 0.00278030926621995 0.00256868080986802 0.00267505214768336 6.73947711517813e-16 0 0 0.00154787019192157 0.00125613792314227 0.0017975857034569 XR_228686.1 LOC100847567 PREDICTED: Bos taurus uncharacterized LOC100847567 (LOC100847567), 0.0 1195 99.85 0.398681055155875 NR_003054.1 SNORD65 Homo sapiens small nucleolar RNA, C/D box 65 (SNORD65), small 3e-22 111 95.77 0.0419664268585132 0 noncoding ATGACGGTGGACCTCGACGTGCGTGGTCGGGCTGAATGTTTTTTAAGTGGCCAGACCCGAGCCTGTTCCCACGCTGTGGGAGGGAGGAAGGCTTCACCGCTGGTGAAACGCGGGCGCGGCTGGAGGAGTCCCGAAGGAGCGGGGGTTGGGGAGAAGCAACCGGAAGCTCGCGATGGCCGAATCTCTACTCCCGACCACCCAGGGGCGGTGCGGCGGGACAGTCTGGCTCTGCGCAAGCGCTCTGGGGCTAGCCGCGTGCCTGTGACCCAGAATTCTTGGGCCTCGGAAGAGACCATGAGCTCCGGAGGAGGGGGGAGTCCGGCCGGCGCGGCGGCGTCTGTGCCGTTAAAAGGACCGGAAGTTCCCGGCCTGTCCGCGGCCGCGAGGGCGCCAGAGCTTGTTAGTTTCTCGACCGATGTTCCCGGGAAGCGTAACTGGAGTGCGGCAGGCGGCTGCGGCCAGGCGGGCCTGGGGGCGGGCGCCTTGGCCCTGTGTTCATATCTAGGGACCGAAATGGAGGAGCGCGTGCATCTTTGTCTGGCAGGGTTCCGCGGTCTGGGAACCTCTCCCCCCGGGCTCGCAGCCGGGAGTGAGTGACCCCAAGGAGGACTGGGTAAAGCGGAGCTGCCTGCACCCGAGGGCGCGGGGCGAGGCTCGTAGGGGGGTCGCGAGGGAGGCTTGCTCGGCTGTCCTGATGATCCCGTAGGAAGTGCCGTCAGAAGCGATAACTGACGACTTTTACGCTAATCTGATGCGGTCGCTGACACCTGACGCTTTAGGTGCCCGTAGCTGCCAGAGTCTGCCCTTAATGCACGTCCTGATCCTTGTTTCAGATGGCGGCCCACTCAGTTTTGTAGACGGGAGCAGCAGCCCTCCTCGAGGTTGCCAGCTAGTGATGCATTGCCAGCGCGTGCTCACCAGCCACCGAGTATGGGCGCCTGGACCGAGGGTCTGAGCTCTGAAGAGTGGTGACCAGCAGAGTTTTAGAGCCGGCAGCAATGGCAGGAACACCCCAGCCCAAGACAAGGTAAGACTGATCTGGACCATGACCATTCTGCATGGTAGAATGGATGAGCAGCTAGTTTTGTTAAAATGGTTTTGCAGAAAAGGATATCAATGATGAAATCACCCAAAAGAAGCTGGAATTACCGGCAGATTGTGTAGTGGTGAACCTACGGTTTTCTGAGGATATCTTTATGCTGTGAATGACTATTCTGGGGAGTATAAAGTAAGATTCACTGATACTAGTTTCCTTGCAGGCTAAGCTGCAGCAGGGGCAGAATTTGGAAGTTGCAAGGACCAGTGGCAGCCATCAACTTGGACATGGAAAATACAGGCTTCAATGTTTTGTTTTGTGCCGAGTATCAAAGAGGACATTCTTAATGTTAAAGAGCCAAGAAACGGATTTGGCACCTTTTTTCTAGGACAGCGGAGTCATTAAATTCATAGTTTCCTAGTATTGTCCCTTAAGCAAAAGTAGCTTTTTTGTACTTGTAAGTATTGTATGCATTTGTTATACTGGGAGAGAGAAAATTCCTGAAATTTGTATCTCCATGCAGTTACCATAGAGGTAATAAAAGGATGCTCTTTTGTATTAAGTTCTTAGAAATGTATATTTTTGAAGAAAAAGTCAAGTCTGATCACTGCTGACAAATATTGTTCGGTCTC EMBV3_43463 AGAAAGAGGAGTATGAAAGACGGTGCAGTGGGGTCTCAGGTGCCTGGGGTGTCCTGTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24008 GGGTGCTTCCTTGGTCCAGTTTTTCCTAGACCGTGGCTTTCATAATTCTGTGATTCTGCC Gene GeneID:614776|POLR2K:NM_001037623:39_cdna UTR3_Alt 1 NULL GeneID:614776 14 GENE POLR2K MGC128521 polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa EMBV3_12746 TGGAACAGAAACTGACCAGTATCGCGGAGGAGCCGCTCTGGAGGAGCGTCTGCAACATTA Gene GeneID:526890|SLC5A9:XM_002686407:344_cdna Constitutive 0 NULL GeneID:526890 3 GENE SLC5A9 NULL solute carrier family 5 (sodium/glucose cotransporter), member 9 EMBV3_29754 GTCTGAGGAGGAAGAAGCCTGCCTGGCTCCATGACCTCTGCTCACTGAATTCTCTCCAAT Gene GeneID:513591|TCOF1:XM_002689293:132_cdna Constitutive 0 NULL GeneID:513591 7 GENE TCOF1 NULL Treacher Collins-Franceschetti syndrome 1 EMBV3_34740 CAACCAACCGCATGATTCCACAGACATCCATCACGCCATTCATTGCTGCTTCCCCTGTCT Gene GeneID:784766|RBMS3:XM_002696871:274_cdna Constitutive 1 NULL GeneID:784766 22 GENE RBMS3 NULL RNA binding motif, single stranded interacting protein EMBV3_33370 CAAGCTGATCTTATGTGACGAGTGTAATAAAGCCTTCCACCTGTTCTGTCTGAGGCCGGC Gene GeneID:508442|BAZ1B:XM_002698188:714_cdna UTR3_Alt 3 NULL GeneID:508442 25 GENE BAZ1B NULL bromodomain adjacent to zinc finger domain, 1B EMBV3_36613 ACACAGCTTAGAGGAGAACGATGAGCACTAACCACCAGCATCCACCTCCCAGACTCTTGA Gene GeneID:517090|LOC517090:XM_002707754:64_cdna Constitutive 0 NULL GeneID:517090 18 GENE LOC517090 NULL similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 EMBV3_08446 AGTAGCACAGAAGAGGGAGGATGCTGTCTCCAAAGAAGTGACTCGGAAACTCTCTGAAGC Gene GeneID:767980|SSR3:NM_001077044:170_cdna Constitutive 0 NULL GeneID:767980 1 GENE SSR3 MGC128109 signal sequence receptor, gamma (translocon-associated protein gamma) EMBV3_16854 TCTTCCAGGATCGATTGTTGAGTACCGGTGTCAGGCCTACTATGAACTTCGGGGAAACAG Gene GeneID:790886|LOC790886:NM_001105027:2_cdna Constitutive 0 NULL GeneID:790886 16 GENE LOC790886 NULL hypothetical protein LOC790886 EMBV3_09868 CTTTTCTGACCTCAAGAGCCCTTTGCACTACTACGGGAACGCCACCATGTCTTTGATGAG Gene GeneID:444860|ST3GAL6:NM_001002883:69_cdna UTR3_Alt 2 NULL GeneID:444860 1 GENE ST3GAL6 SIAT10 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 EMBV3_13494 CTGAGGCTCAAAGAGGTTAAATATCTTGCCCAAAGTCATAAAAGCTGCCAGATGAGTAGC Gene GeneID:535194|GPHN:NM_001078006:169_cdna Constitutive 0 NULL GeneID:535194 10 GENE GPHN NULL gephyrin EMBV3_17769 TCTGCTCAATCAAGTCTAACAGACACAAGGATGGCTTTCATCGGCTCAGGCAGCATCACG Gene GeneID:100337199|LOC100337199:XM_002695707:308_cdna Constitutive 0 NULL GeneID:100337199 19 GENE LOC100337199 NULL carboxypeptidase D-like EMBV3_41052 CCCTCGGCTCAGAGAGAGGCCTTCACCTCCAAGGAGACTGAATTTTGCCAATTACTGTAA Gene GeneID:511414|PPP1R13B:XM_002696847:685_cdna Constitutive 2 NULL GeneID:511414 21 GENE PPP1R13B NULL protein phosphatase 1, regulatory (inhibitor) subunit 13B EMBV3_39266 ATACTCCTGGAAGTACCTTTCAGATCCACATATGCCTCAGCACCTGGAATTGCAGTGACC Gene GeneID:100336644|LOC100336644:XM_002693977:215_cdna Constitutive 0 NULL GeneID:100336644 16 GENE LOC100336644 NULL AU RNA binding protein/enoyl-Coenzyme A hydratase-like EMBV3_31564 CAAAACCAGTCAGTTAGACAGTGGCTTGAGGAAAACATACTAAGAAAATCACATGTGGAT Variant GeneID:533633|WDR19:XM_002688203:70_cdna 362^477 1 EMBV3_27554 GeneID:533633 6 GENE WDR19 NULL WD repeat domain 19 EMBV3_40225 CCAGTATGCTGATGTGACAGATGAAGAGGACTCTGTTCCGAAACACCAATGTGGAAGATG Variant GeneID:513649|CCDC43:NM_001098962:239_cdna 480^538 3 EMBV3_11951 GeneID:513649 19 GENE CCDC43 MGC159622 coiled-coil domain containing 43 EMBV3_12178 GCTGAGATCCGGGCCCACGCCACGGCCAAGAGCGTTGAGGGCGAGCAGCATGAGAAGGCA Variant GeneID:616283|LIN7B:NM_001046577:385_cdna 244^453 4 EMBV3_07605 GeneID:616283 18 GENE LIN7B MGC137426 lin-7 homolog B (C. elegans) EMBV3_24148 TTCAGAGATGGAGAAGAGAGGAGGTAGAGAGGCTGATTCCGGGGATGGGAGGGACTCACT Gene GeneID:100336635|LOC100336635:XM_002694173:612_cdna Constitutive 0 NULL GeneID:100336635 16 GENE LOC100336635 NULL hypothetical protein LOC100336635 EMBV3_20153 CCTACGTACATGGGCCAGGGCTCCGTGTTCTGCCTTTCTTCTTCAATGTCCAAGACAGAA Gene GeneID:534759|GPATCH8:XM_002696075:4_cdna UTR3_Alt 3 NULL GeneID:534759 19 GENE GPATCH8 NULL G patch domain containing 8 EMBV3_01088 GGAGACCCTGATGCGGCTGTTGCCGGGCTCCTGAAAGAGAAACAAAACTGAAACTAATTG Gene BVV0102_149791 - 1 EMBV3_27086 GK000025.2:36236130-36264280 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14062 TAAAGCTTACGACATGCTGGACAAGGTCAACGCCTTGCTGCCCACAGAAACCTTCATCCC Gene BVV0102_059835 - 0 NULL GK000028.2:9239724-9288633 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160103 TCONS_00160108 TCONS_00160100 TCONS_00160107 TCONS_00160102 TCONS_00160105 TCONS_00160101 TCONS_00160106 TCONS_00160099 TCONS_00160104 TCONS_00160109 1 XLOC_097586 Coding TCONS_00160099 XLOC_097586 Coding Coding LGALS8 28:9239624-9272741 x TSS119826 7281 1 TCONS_00160099_6 1124 0.0284301606922126 29 0.781012199541007 0.00218747836461283 0.00158943433275963 0.00190518093850008 0.000941898765677539 0.00131569484588697 0.00012271095530741 0.000856642678718405 0.00099000005463821 0.000900350455530147 0.00178513312842225 0.000882212846508976 0.000498650348576728 0.000204504272644845 0.00054578251273479 0.000512817047853393 0.00538773721713475 0.000140144258558205 0.003546562447163 0.00311483239676379 0.00238898056466967 0.000943638997364688 0.00177849211625451 0.00216160052079467 0.0017470141896309 0.00250962151195124 0.00229355942749146 0.00201682753969872 0.00084004147342137 0.00061686539425526 0.00120201626604276 XM_583512.7 HEATR1 PREDICTED: Bos taurus HEAT repeat containing 1 (HEATR1), partial 0.0 4132 99.96 0.314929267957698 NM_018072.5 HEATR1 Homo sapiens HEAT repeat containing 1 (HEATR1), mRNA. 0.0 4626 85.98 0.53811289658014 TCONS_00160099_6 sp|Q9H583|HEAT1_HUMAN HEAT1_HUMAN HEAT repeat-containing protein 1; 0.0 2016 89.25 0.999110320284697 1 coding 0 0 0 0 -0.73780275302897 0.0687856559195217 -0.0127660877194368 0.856559627838103 TGAAAATGTGATTAAAAGCACAAAGTCAGAAGAACTAATTGGCGTAGCGAATCAGAAGATGATTGAGTTGCTGGCTGACAATATAAATTCGGGGAATCCCTCTTCAATGTTAAAGATGGTAGAGGATTTAATAGGTGTTGGAGAGAAGGAATCCTTTAGCTTGAAGCAGAAAGTGACTTTTCACGTAGTCATGGCTGTGCTTGTCTCCTGCTGTTCGTCCTTGAAAGAAACTCACTTTCCATTTGCAACAAGAGTCTTCAGTTTGTTGCAGAAAAAAATAAAGAAGCTTGAAAATGTCATTACTACAGTGGAGATCTCCTCAGAATGGCATTTTGAGCTGATGATGGACAGAGGGATACCATTGGAGCTGTGGGCACATTACGTAAAACAGCTCAAAACTGCCCAGCGGATTGCCGTGGAGGACTCAGTTTTACTCTTGTTTTCACTGAAAAATTTTATTCATACTCTAAAGGCTCCTAAATCTTTTCCTAAAGATGATACATGGTGGAATCCCGAACAGCTGCAAGAAGACAGCAGAGACTACCTGCGTCTGCTCATTGGGCTCTTTGAGACGGTTCTCAGTGGTGCTGATGCCATTCACTTTCGGGTTCTGATGAAACTCTTCATAAAGTGGTGGTCTCTCTACTCATTAATCTGGGTAGCCCCATAAAAGAAGTGCGCAGGGCTGCCATTCACTGTCTCCAGGTCCTCAGTGGAGTGGCGTCCCAGTTTCATCTGGTCATAGATCACGTGGTTCCTAAAGCAGAGGAGATCACCTCAGATGCCACCTACGTTGTTCAGGACTTGGCAACTTTATTTGAGGAACTGCAGAGTGAAAAGAAGCTGAAATCTCATCAGAAGTTATCTGAAACTTTGAAAAACCTCCTTCATTGTGTATATAGTTGCCCATCTTACGTTACAAAAGACTTGATGAAAGTACTTCAGGACATCAACAATGAGCTGGTGCTTTCTCAGCTGTTGTCAATGATTGAACAACTTTTAGAAAAGAGCCAGAAGGAGCCCGCAGCTGTCCTGAAAGATGAGGCCATTGCCCTGCATCTCATTCTGGGAAAATATAATGAATATTCAGCTTCTCTTTTACATAAGGACCCGAAGAGTCTAGATATATTTATAAAAGCTCTGCACACAACAAAGGAACTTTGCATGGGAATGCCAGCCATTCAGATTACAGCTCTCGAAAAGATTACGAAGCCATTTTTCGCAGCTATAACAGATGAAAAGGTTCAGCAGAAGCTTTTGTGCGTGTTGTTTGATTTATTGGTGAACTGTAAGAACTCACATTGTTCTCAGACTGTTAGCAGTGTTTTCAAAGGGATTTCTGTTAATGCTGAACAAGTCAGAATAGAACTGGAGCCACCAGATAAAGCCAAGTCCTTAGGCACAATTCAGCAGACGAGGAGGCAGAAGATGCAGCACAAAAAATCACAAGATCAAGAATCTGTCCAGGAAGTTGGAGGTTCTTACTGGCAAAGAGTAACCCTCATCCTGGAATTATTGCAGCACAAAAAGAAACTCAAAAATCCTCAGATACTGATACCGACTCTTTTTAACCTGCTGTCAAGGTGTTTAGAGCCTTTGCCACCCGAGCAGGGAAGCATGGAATACACCAAACAGTTAATTCTTAGTTGTCTGCTTAACATCTGCCAAAAACTGTCTCCAGAAGGTGGCAGAATACCCAAAGACGTTCTGGATGAGGAGAAATTCAACGTGGAATTGATAGTCCAGTGCATCCGTGTTTCTGAGATGCCTCAGACCCATCACCATGCCCTTCTGCTCTTGGGTACTGTTGCTGGAATATTTCCTGATAAAGTTCTACACAATATCATGTCTATTTTTACATTTATGGGAGCCAATGTGATGCGTCTAGATGATACTTACAGTTTTCAGGTCATCAACAAGACAGTGAAAATGGTTATTCCAGCACTTATTCAGTCTGATGGTGGCGACTCCGCCGAAGTCACAAGGAACGTGGAGGACATCGTGGTCAAGATCATTAACGTGTTTGTGGATGCGCTGCCCCACGTGCCCGAGCACAGGCGCCTGCCCGTCCTCGTCCAGCTTGTTGACACGCTGGGCGCAGAGAGGTTCCTCTGGGTTCTCCTGGTCCTGCTCTTTGAACAGTACGTCACCAAAACTGTGCTGGCGGCCGCCTATGGAGAAAAGGATGCTATTTTAGAGGCAGACACTGAATTTTGGATTTCCGTCTGTTGTGAGTTTAGTGTCCAGCATCAGATCCAAAGCTTGATGACTATCCTTGAGTACTTACTGAAGCTGCCAGAGGAAAAAGAAGAAACCATTCCCAAATCAGTATCTAACAAGAGCGAACCACAAGAAGAAATGCTACAGGTCTTTAACATAGATGCGCACACCAGCAAGCAGCTGCGGCATTTTAAATTTCTGTCTGTGTCCTTCATGTCTCAGCTCCTGGCTTCCAACAATTTTATCAGAAAGGTAGTTGAAAGTGGTGGTCCTCAGGTGTTGACAGGCCTGGAACAGAGGTTGCTAGAAACAGTTCTTGGCTACATCAATGCTGTAGCACAGTCCATGGAGAGAAATGCAGACAAGCTAACTGGGAAGTTCTGGCGAGCACTCCTCAGTAAAGCTTACGACATGCTGGACAAGGTCAACGCCTTGCTGCCCACAGAAACCTTCATCCCCGTGATCAGAGGACTGCTAGAGAACCCACTGCCGTCTGTTCGCCGGAAAGCTTTGGATCTTTTGAACAACAACCTACAGCAGAAAACCTCCTGGAAGAAGAAAATTATTTACCATTTCCTCGACCTGGTCCCCGTCCTCGTGGCCATGGTGAAGCATAAAAGAAAGACGTTAGAAGATCAACCAATAAACAGACAGACAGCTCTGTATACCTTAAAGCTCTTATGCAAGAATTTCGGTGCAGAAAATCCAGAGCCTTTCGTCCCGGTGCTGCACACCACTGTGAAGTTGATTGCTCTGGGCGCAAAGGAGGAGAAGAACGTCCTGGGCAGTGCCCTGCTATGCGTGGCCGAGGTGGTCTCCACCCTGGAAGCCCTGGCCATCCCTCAGCTCCCCAGCCTGATGCCGCCACTGCTGACAACCATGAGAAGCACCCGCGAGCTGGTCTCAGGTGAAGTCTACCTGCTCAGCGCCCTGGCAGCCCTGCAGAAGGTGGTCGAGACCCTGCCGCACTTCATCAGCCCCTACCTGGAAGGGGTCCTGTCGCAGGTGATTCACTTGGAGAAAATCACTAGTGAAATGGGTCCTGCCTCCCAGGCTAATGTCCGTCTCACGTCCCTTAAAAAGACACTGGCTACCATGCTGTCACCCCGAGTGTTACTGCCAGCCATCAACAAGACATACAAGCAGATTGAGAAGAACTGGAAGAATCTCATGGGCCCGTTTATGAGCGTCTTGCGCGAGCACATTGGGGTGATGAGGAAGGAGGAGCTCGCCTCCCACCAGCCCCAGCTCACCACGTTCTTCCTGGAGGCCCTGGACTTCCGCACCCAGCACGCTGAGAATGATCTGGAGGAAATCGGAAAAACGGAAAATTACATCATTGACTGTCTCGTAGCCATGGTGGTCAAACTTTCTGAGGTCACATTCAGACCCCTGTTCTTCAAGCTATTTGATTGGGCTAAGACTGAGGATGCTCCCAAGGACAGGCTGTTGACATTTTACAACTTGGCAGATTGCATTGCTGAAAAATTGAAAGGGCTTTTTACCCTGTTTGCTGGTCACTTAGTGAAGCCTTTTGCTGACACCTTGAACCAGGTGAACATCTCCAAAACAGATGAAGCGTTTTTTGACTCTGAAAACGATCCTGAAAAGTGCTGCTTGCTACTACAGTTTATTCTGAACTGCTTATACAAAATCTTCCTGTTTGACACCCAGCATTTTCTAAGTAAAGAGAGAGCAGAAGCCTTGATGGTGCCCCTGGTGGATCAGCTGGAAAACAGGCTTGGAGGCGAAGAGAAGTTCCAGGAACGGGTGACAAAGCACCTGATACCGTGCCTTGCGCAGTTCTCAGTGGCCATGGCCGATGACTCGCTCTGGAAACCACTCAACTACCAGATTCTGCTGAAGACGAGGGACTCCTCACCCAAGGTTCGATTTGCTGCTCTGATAACTGTGTTAGCACTGGCTGAAAAACTGAGAGAGAATTATATCGTCTTGTTACCAGAATCCATTCCGTTCTTAGCTGAATTGATGGAAGATGAATGTGAAGAGGTAGAGCACCAGTGCCAGAAGACCATCCAGCAGCTGGAGACCCTCCTGGGAGAGCCTCTCCAGAGCTACTTCTGAAACCCTGGGTTCGGGTGTTTCGTACTCTGGTCAGAGATCAGACCGCTCTTTCATGTCTTTATTCTGGGTGTTCGGGACCATGTTACTTTTGGTGCCTTAACCCTGCTTGGACTTCTTTACAAAATCCCCTCCTGATCTATGCGACCACAGAAGCCTTTCCTGCCAGTTGTACAGAATCTACAGAGAGTAAATGATACGTGGTATTTTTATACAGACTGCTGTGTTTGTTTCAGCATTGACTATGTGTGTAGTGTGTGCTCAGTTGCTCAGTCTTTGGGACCCTTTGGACTGTAGCTCGTCAGGCTTCTCTTTCCATGGGATTCTTCAGGCAAGAATACTGGAGTGGGTTGCCATTTTCTCCTGCAAGGGATCTCCCCAAGCCTGGGGATCAAACCCAGGTCTCCTGCATCACAGGTGGATTCTTTTACCAATAAACCATCGGGGAAGCCCCAGCACCTATTACAGTCTCTCTTGATTGATGTTACTGTCACTACATACATGTTTAATGTTAGCATTCAAAGCTAACCTGCATTTGGACTATAAAACCTGAATGTTCGTGGTAAAGGAATAGCTTTTGCATGGTATCCATGTCAGGGATTTCACTCAAAGCAGCTCTTTACTTTAAGAAAATGACAGTTAGCACCCAACAAGAATGCTTTCAGCCCTGAAGCCACTGGATTTTTACTTTTCGTTCTGGGTGGATAACACTTCAGTCTTAATTTTTGTGTGTGCCCCACAGAGCAGGTCGTTCTGGAATGCATCTTCTACTCTGGACTGTCCTTTATCCTTCAGTCTCTTGGGGATAGGGTGGGGTGGTAGAGGCAATAGACTGTTTACAGAACCACCACACCCAATGATCCTACAAATAGCCAGGGCCTTGAAACACTCGGTGGCAAGAAGGAGCCCCTCCAGTTAGATGTGCTCACATTTCCACTGGCAGTTAACCAAGAACTGAGGAGTAAAGTAAGTAAAAGAATTTTTTCAAAGCTTTAACGTTCTCTCTACACCATGTCATGGTGAAGCTAGAAAGTGAACACTCAAGCAGAATTAAATCTGCCTTTATTTTGTTGAAGACATTAATTGATGCCTTTAAAATTTTTAAGGCATCTAAGAACTGTTCCATAGCTTTGTTAAAGTCTGAAAGCCCTTGATCTAATTTAATATAGAAATTTAGTGTGGAATTGTGACAAGCAGAAGGCTGGTTTGCGTCTGGAGACAGAGCTTGCTAGGAGTGCGTATTTCTCTTTAAGAAATGTCACAACAGGATTTATTAATAAATGGTAACAGCTTATTTTCTACAAATGATCTTAAGATTTTATATTTACTCTATCAAAGAACTCTTAGTACTGTCCACATAAAAGGAAAACGTACTGTGGTTAAGAATTAAAGAAAACAAGGTAAGGGGGCTTTTCTTTTTTTCTAAGTGGTCCACAGTTTCTGCCATCTGCCAGGCCCTCTGATGTTCTTTTCTGAAGGAAAAAAATAACCCTGGGGAGTCTAGACCCTTCTTGCCTTGTACAGCTTTCCCAACATCCCTACCTCCACTATTTTTTTTTTTTTTTTGAGTTTGGTGAGACTCCACATAATAAATTAACATGAAAAGATGGAAAAGAATTAAGTGCTAAAAGCGTCCACACTGAGTACCTTTAGGAGTAAGATTGGTAATAGTATTTTCTGCAATATATGGATACAAATAATATCTAACCACAAACTGTTACGAAAATATCCCCAAATCCTGGCAGAATTCAGCCCAGCAATTTAACATGATAAAATGATGCGACGGATTTAGCTTTCTCCCTCCCCCACTCACAAACTTCTGAAATTCCCTGTAACAAGATCTGACCTGTAAGAATTCTACAAAGAACTTCTGCCAAACTTGCTTCAAAGAATAATAGACAAAAATTACAGAAATGCAACAGTTTAACTTGCTGATACAGGTCCTGATTTTAATCACTAAAAGCAGAACAACGTTTTGATCTCCGTCACTAACGATGACGGACCCGTCTTCAGACAGCGGAGGCAGTGCTGGTCGCGCTGACCAGCGGCAGAATGCCAGCGCCTCTCCACTTGACTGGTCTCGGCTGCTGCAGTTTACTGATGGGGCCTGCTTTATAAACAGCCATTAAATCTGATCTTGACACTGCTTTGTTACCCACAGACATTTTACAGATTGAGACCGTCTCTTGTCTACCTTACACTCTCTGTAGAGTATGTGCATAGGAGACCTCTGGCTCACTCGAAACTCCAATATTCTAAAATATGCATTTACTGGTACAGAAATCAGTGGCCTTGAGACTGACGTCAAGTTAATTTCAACACCATTTGGTTCAGTTTTGCTTTGCTTTTTGCCTTTATCATTGTGCTGTGTTTAGAGTTCAAAGTGTTAATCATTTGGTAATGCTTCCAGCTCGCAGAGCTAGATATTTATCATGCTAAAGAAAATCTCCAGACATAAATCAACATCAAACCTCCCAATTATGGGATACAATCAAACCCTGAGCCAGCACTGGAGGAAGTGTCACCTATAAATTTGTGCCCTTAGGAGACTTAATAGAATAATCCTTCTAAGTCCCTGGTGAGTCCAGTGCGTGAAGGAGCAACAGTGGCCCAGAGCTTGGCAGAACAGGGAATGTACGCGCCCCACTGTATCCCTGGCTCCCAGCACACGTGGAAAGATAAATGCTCAGTGCAGGCTGGCTTTCTCTGTTGCAGTGGGCACTTCCTAAATACTTGCTGAATGCAAAGCAGGTTTACAAGAGGCAGTCAAGGTGCAGAGGAGAGCAGGAGAGCCTGTTACAGTAATGGCTGTGACTACTGTGGCATCAGTCTTCTCACTCGGCTCGGCAAGTCGCGCAGCAGGGACTAAGGACACCCAGCGGGACTTAAGGACTTTAACAATGTATAGAAAGCATGTCATGATAGAGGCATTTTACCAAGGCCAGTGTTACCAAGGTCATGCTGTATTTCAGCATTTAC TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160103 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160110 TCONS_00160110 TCONS_00160110 TCONS_00160110 TCONS_00160110 TCONS_00160110 TCONS_00160111 TCONS_00160110 TCONS_00160112 TCONS_00160112 TCONS_00160113 TCONS_00160113 TCONS_00160113 TCONS_00160113 TCONS_00160114 TCONS_00160114 TCONS_00160114 TCONS_00160114 s 5' 0 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160103 TCONS_00160102 TCONS_00160102 TCONS_00160102 TCONS_00160110 TCONS_00160110 TCONS_00160110 TCONS_00160110 TCONS_00160110 TCONS_00160110 TCONS_00160111 TCONS_00160110 TCONS_00160112 TCONS_00160112 TCONS_00160113 TCONS_00160113 TCONS_00160113 TCONS_00160113 TCONS_00160114 TCONS_00160114 TCONS_00160114 TCONS_00160114 s 5' 0 EMBV3_10618 CTCTAAAGCAGCATCTTACTATCTTTTGTAAACTCATCCACATTTACACGCTAGTTTTCC Gene GeneID:100124520|GNAL:NM_001102554:2_cdna Constitutive 0 NULL GeneID:100124520 24 GENE GNAL MGC148547 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type EMBV3_03981 CAGCGAACCTCCAGTGGTTTATTCTCACCAAAGCCCAGCAGGCAAGAGAGAACATGAAGA Gene GeneID:515010|C22H3ORF23:NM_001102016:107_cdna UTR3_Alt 2 NULL GeneID:515010 22 GENE C22H3ORF23 MGC160071 chromosome 3 open reading frame 23 ortholog EMBV3_03715 ACTGAAATTGGGGCTGATGGCATTGGAACTGTCCTGTTGGGCCCATAATTGTTCTCCTGC Gene BVT0102_262285 + 0 NULL GK000010.2:51921041-52152640 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33079 GAGACCAGTTCTCTTGAACCCTCCATATTTTAAAAAGAAGCTCTGCAACTGTGGGGAGGG Gene GeneID:510062|LOC510062:XM_002695976:324_cdna Constitutive 0 NULL GeneID:510062 19 GENE LOC510062 NULL hypothetical LOC510062 EMBV3_42629 TTGATAGAACTCCTGAAGAATAATGGAAGATTACCAAGACCAGATGGATGCCCAGATGAG Gene GeneID:525246|JAK2:XM_002689603:8_cdna UTR3_Alt 2 NULL GeneID:525246 8 GENE JAK2 NULL Janus kinase 2 EMBV3_22724 GCAACTGTGGGCAGGTCAGCTGTCTTCTCTGTGCCTTGTTGGAGCCATACATTTCGTCAT Gene BVV0102_149211 + 0 NULL GK000019.2:45204998-45236006 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097265 TCONS_00097264 1 XLOC_058206 Coding TCONS_00097265 XLOC_058206 Coding Coding EFTUD2 19:45197094-45233566 j TSS72107 3507 1 TCONS_00097265_7 972 29 0.904636560554961 6.70397600523194e-05 0.000147604163845272 8.49671217763143e-05 0.000677569012962545 0.000156408547111338 0.000275952046079326 6.25244818092271e-38 3.00145734950375e-31 1.00165089363695e-24 1.89539007214987e-37 1.89272347893782e-67 1.56382784795164e-25 7.81953417041736e-17 6.27516186045792e-34 3.37337052686417e-19 2.87894441325659e-24 3.3334885571106e-20 1.71110230138552e-47 3.54164690205786e-05 8.84543146138388e-34 1.44992528207351e-24 0.000191695489105744 3.74548046490351e-40 3.40727691994805e-40 9.83692719089099e-05 0.0009655300073876 5.87547061770579e-05 1.30485238244025e-28 4.88414012492725e-34 1.07153920094169e-29 XM_005220842.1 EFTUD2 PREDICTED: Bos taurus elongation factor Tu GTP binding domain containing 2 (EFTUD2), transcript variant X1, mRNA. 0.0 6154 100.00 0.972626176218991 NM_001258353.1 EFTUD2 Homo sapiens elongation factor Tu GTP binding domain containing 2 (EFTUD2), transcript variant 3, mRNA. 0.0 4520 90.45 0.939264328485885 TCONS_00097265_7 sp|A4FUD3|U5S1_BOVIN U5S1_BOVIN 116 kDa U5 small nuclear ribonucleoprotein component; 0.0 2001 99.90 0.998971193415638 5 coding 0 0 0 0 -0.643229482865917 0.00704518903396998 -0.0860943514427982 0.103003958933594 GGGGAGGCTTGCTCTGGTGGAATGGGAAATTAAATGTCAGATCTGGAAGAGATGCTATATGTTATATGCCACGTTCACTTTACAGATGGAGCCTGCGTTGTAGCGGGAAGCTGCAGTGAAGTTTGGTACCGAAATTCACTAGTTTTGTGCAACTGTGGGCAGGTCAGCTGTCTAATCTGTGCCTTGTTGGAGCCATACATTTCGTCATTCACACCATGGATACTGACTTGTATGACGAGTTTGGGAATTACATCGGACCAGAGCTTGATTCTGATGAAGATGATGATGAATTGGGCAGAGAGACCAAAGATCTTGATGAGGTCGATGAGGATGAGGACGACGATGATGTGGGCGATCACGACGAAGACCACCCTGGGATGGAGGTGGTGCTGCACGAGGACAAGAAGTACTACCCCACCGCCGAGGAGGTGTACGGCCCCGAGGTGGAGACCATAGTTCAGGAGGAGGACACCCAGCCTCTCACAGAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACGTTACCTGTCACGGTGTACGAAATGGATTTCTTGGCAGATCTGATGGATAACTCGGAGCTCATCAGAAATGTGACTCTCTGTGGCCATCTGCACCACGGCAAGACATGTTTTGTAGATTGTTTAATAGAGCAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTACACTGACATCCTCTTCACAGAACAAGAGAGGGGTGTTGGCATCAAAAGTACTCCTGTGACAGTGGTCTTGCCAGATACCAAGGGGAAATCCTACCTCTTCAACATCATGGACACTCCAGGACACGTGAATTTTTCTGATGAGGTCACAGCGGGCTTGCGCATCTCAGATGGAGTGGTCCTTTTCATCGATGCCGCTGAGGGCGTGATGCTGAACACAGAGCGGCTGATCAAGCACGCAGTGCAGGAGAGGCTGGCAGTCACCGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCACCCACGGATGCTTACTATAAGCTGCGTCACATTGTCGATGAAGTCAACGGCTTAATAAGCATGTACTCCACGGATGAGAACCTGATCCTTTCCCCGCTCCTGGGCAATGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTGCCAAGATCTATGCTGACACCTTCGGTGACATTAATTACCAGGAGTTCGCTAAAAGACTCTGGGGTGACATCTACTTCAACCCTAAGACGCGGAAGTTCACCAAAAAGGCCCCAACCAGCAGCTCCCAGAGGAGTTTTGTGGAGTTTATCTTGGAGCCCCTCTATAAGATCCTCGCCCAGGTCGTGGGTGATGTGGACACCAGCCTCCCGAGGACCCTGGATGAGCTTGGCATCCACCTGACCAAGGAGGAGCTGAAGCTGAACATCCGCCCCCTGCTCAGGCTGGTTTGCAAAAAATTCTTTGGCGAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCGTCTCCAAAGGTGGGCGCCAAGCCTAAAATCGAGCACACCTATACCGGTGGTGTGGACTCTGACCTTGGCGAGGCCATGAGTGACTGTGACCCCGACGGTCCCCTGATGTGCCACACGACCAAGATGTACAGCACAGATGATGGAGTTCAGTTTCATGCCTTTGGCCGAGTGCTAAGTGGCACCATCCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACACCCTGGAGGATGAGGAAGACTCCCAAATATGCACCGTGGGCCGCCTTTGGATCTCCGTGGCCAGGTACCACATCGAAGTGAACCGTGTTCCTGCTGGCAACTGGGTCCTGATCGAAGGTGTCGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAACGAGGAGGCTCAGATCTTCCGGCCCTTGAAGTTCAACACCACATCTGTTATCAAGATTGCCGTGGAGCCAGTCAATCCCTCTGAGCTGCCCAAGATGCTGGACGGCCTGCGCAAGGTCAACAAGAGCTACCCGTCCCTCACCACCAAGGTGGAAGAGTCTGGCGAGCATGTGATCCTGGGCACTGGAGAGCTCTACCTGGACTGCGTGATGCACGATTTGCGGAAGATGTACTCGGAGATCGACATCAAGGTGGCTGACCCTGTTGTCACATTCTGTGAGACGGTGGTGGAAACGTCGTCCCTCAAGTGTTTCGCCGAAACTCCCAATAAGAAGAACAAAATCACCATGATCGCCGAGCCTCTGGAGAAGGGCCTTGCAGAGGACATAGAGAACGAGGTGGTCCAGATCACGTGGAACAGGAAGAAGCTGGGAGAGTTCTTTCAGACCAAGTATGACTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTCGGCCCAGATGCCACTGGCCCCAACATCCTGGTGGACGATACCCTGCCCTCGGAGGTGGACAAGGCTCTTCTCGGCTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGGCCCCTCTGTGATGAGTTGATTCGGAATGTCAAGTTTAAGATCCTGGATGCAGTGGTTGCCCAGGAGCCCCTGCACCGGGGTGGGGGCCAGATCATCCCCACAGCCCGGAGAGTCGTCTACTCAGCCTTCCTCATGGCCACCCCTCGTCTGATGGAGCCCTACTACTTCGTCGAGGTCCAGGCCCCCGCAGATTGTGTCTCTGCTGTCTACACGGTCCTGGCCAGGCGCAGGGGACACGTGACTCAGGATGCACCCATCCCAGGCTCTCCTCTGTACACCATCAAAGCTTTCATTCCAGCCATCGACTCTTTCGGCTTTGAGACTGATCTGCGAACTCACACGCAGGGCCAGGCCTTTTCCTTGTCTGTCTTCCACCACTGGCAGATTGTACCCGGTGACCCTCTGGACAAGAGCATTGTCATCCGCCCCTTGGAGCCACAGCCAGCTCCCCACCTGGCCCGAGAATTCATGATCAAAACCCGTCGTAGAAAGGGCCTGAGTGAGGATGTGAGCATCAGCAAGTTCTTCGATGATCCTATGTTGCTGGAGCTCGCCAAGCAGGATGTGGTGCTCAACTACCCCATGTGAGCGCCAGGCGTCATGGCAGCTCCCACTCCCCGCTCTGGGCCACACCCTGGACTTGAAGCTGGGCCCTGGTGGGACTCAGACTCCACGTGGTCAGAGCATGTCTGGGGCTGCTGTGGCCGTCCTCCACAATCCTGGAGCCCCCAAGCCTCCAGCCCAGAGGGAGGAGCATTCGGCCTCCTGGTTCCTCCTATGGCCTCAGCCTGGCTCCATTCCCAGAGAACAGAGAGGAGCTCAGGGTCCAGGAAGGAGAAGGGGCTGGAAGTGTTGAAGCCCAACGGGCCCTGTCTTTCAGGATTTACGTGAAATTTTTTTTTTTAGTAAAAGTTTGACTGTAGACATGTTTTATAAGTGAACAGAACATTCTGACCTCTGC EMBV3_09569 GAGCAGCCCCAGCCTCTGAAATGACATGAGAAGAACAGCCTTCTGGATATCTGTCCATTT Gene GeneID:282333|PTPN13:NM_174590:14_cdna Constitutive 0 NULL GeneID:282333 11 GENE PTPN13 NULL protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) EMBV3_10750 GGGCAGAATATTGATTTGGAGGAAGAGGAAGAGGAAATCACTTCACCTGAGGAGGGGGAG Gene GeneID:782781|LOC782781:XM_002686343:96_cdna Constitutive 0 NULL GeneID:782781 3 GENE LOC782781 NULL hypothetical LOC782781 EMBV3_11278 AAGTAAAATGCTCTGTAATGCTCTCCAGGGGTCAAACGCTGTGTCAGGGACGGGGATGGC Gene BVV0102_178432 + 0 NULL GK000015.2:82208173-82265070 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18061 CACCTTTGATTTTTGGCACTTTCACCCCTGATTCCTTCTACGGCAAAACCCACCTGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07107 GAGCGACCTGCGCGGGGCCTGGGGAGTCATCCCCCTCCTGTGGAGCAGGCCACGCTGCAG Variant GeneID:509781|FASTK:NM_001035077:610_cdna 153^463 2 EMBV3_41873 GeneID:509781 4 GENE FASTK MGC137976 Fas-activated serine/threonine kinase EMBV3_17029 CAACAGCCCCCAAATGACAGCCCTTCTCTACCATCATTACTGCTTCTGCCTTATCTCTGC Gene GeneID:282239|GABRB1:NM_174544:11_cdna Constitutive 0 NULL GeneID:282239 6 GENE GABRB1 NULL gamma-aminobutyric acid (GABA) A receptor, beta 1 EMBV3_26513 GCTTAGCCTATAACCTATCCTGAAGCTTAAAACATGGATTCCTCACAACGGCATCCCAGA Gene BVT0102_125741 - 0 NULL GK000004.2:68773108-68775898 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184386 TCONS_00184391 TCONS_00184384 TCONS_00184394 TCONS_00181887 TCONS_00184392 TCONS_00184383 TCONS_00181888 TCONS_00184387 TCONS_00184385 TCONS_00184382 TCONS_00184395 TCONS_00184389 TCONS_00184393 TCONS_00181885 TCONS_00184390 TCONS_00184388 2 XLOC_111335 XLOC_110715 Coding TCONS_00181887 XLOC_110715 Coding Coding JAZF1 4:68609256-68775990 j TSS136032 3796 1 TCONS_00181887_1 179 5 0.977263049306376 0.00684455038908021 0.00591679488091211 0.00626181930183574 0.00599596581947529 0.0085516271322858 0.00338087301496063 0.00587565545581891 0.0100041300667181 0.0154047072458109 0.00025244855494404 0.000189027287709436 2.36495303160069e-05 0.0029934777083965 0.00176780331098382 0.00348618759993746 1.41382919234692e-226 6.32338257444443e-110 0 0.00478613382254873 0.0047844038670478 0.00342763081326635 3.57187821516112e-55 2.10853826432564e-138 7.97844620041735e-143 0.00202929786328653 0 0.00389347422768096 7.38468721102997e-05 5.73788865201636e-05 5.66180533384119e-123 NM_001206257.1 JAZF1 Bos taurus JAZF zinc finger 1 (JAZF1), mRNA. 0.0 1485 99.88 0.217334035827187 NM_175061.3 JAZF1 Homo sapiens JAZF zinc finger 1 (JAZF1), mRNA. 0.0 3653 88.87 0.741570073761855 TCONS_00181887_1 sp|Q86VZ6|JAZF1_HUMAN JAZF1_HUMAN Juxtaposed with another zinc finger protein 1; 2e-130 370 100.00 0.994413407821229 0 coding 0 0 0 0 -0.978654278277235 0.0346107480593058 -0.0592088120165913 0.25851858794786 GTAAACTAGTTTATAAAGCTCCCCACCCCACCGTGAGAAACCCTGGCCTTGTGGGAGAGAACGCTAGTTGGCGGCTGCAGAGCGTGTGATACAGATCCACGTGTTTTAGAAAAACAAGAATTACAGCAGCCAACCTATGTTGCCCTCAGTTACATTAATAGATTCATGACGGATGCTGCCCGCCGAGAGCAGGAGTCTCTGAAGAAGAAGATCCAGCCAAAGCTCTCGCTGACTTTGTCCAGCTCCGTGTCTCGAGGGAATGTGTCCACGCCACCTCGCCACAGCAGCGGAAGCCTTACTCCCCCAGTGACCCCGCCCATCACCCCCTCCTCTTCATTCCGCAGCAGCACCCCGACTGGCAGCGAATACGACGAGGAGGAGGTGGATTATGAGGAGTCAGATAGCGACGAGTCCTGGACCACAGAGAGTGCCATCAGCTCTGAAGCCATCCTCAGCTCCATGTGCATGAACGGAGGGGAGGAGAAGCCTTTTGCCTGCCCGGTTCCTGGATGTAAAAAGAGATACAAGAATGTGAATGGCATAAAGTACCATGCTAAGAATGGTCACAGAACACAGATTCGTGTCCGTAAACCATTCAAATGTCGTTGTGGTAAGAGTTACAAGACAGCTCAGGGCCTGCGGCATCACACAATCAATTTCCATCCCCCGGTGTCGGCTGAGATTATCAGGAAGATGCAGCAATAACATGCTGGTCGTAACTGTGCCAAGAAATCCTCACCAGCAGTTGCTGATTTTGAAAACAGCCACCTTTTTTCAGGGGAAGCATTCAGCAACCCTTTAAAGAATTAAATGCATGCTTTAAATTTTTTCTGTAATTTTGGAATGATGTATCTTTGTAGAGTTAATGATTTTGTACATTTGCACATGTAATCATCATACCCATTTTCATTACTTTGATATAAGGTGCTAAACAAAACAAAAAGCTCTAGGTTCTTCAGCACATTTTCCCCAAACCAAGATTAAAATTGAGGGCATGTTGCATATTGTTTAGTTGTATTGCAGTGATATCAACTGGGGAGGGGGGAGGAGGGGCTAGGCACTGAGGTTTTTTTTCCCCCAAGATTATAATGTGATTGAAGTTTTCAACACATCAACTCATTGTGTTCAAAACCAAAATAATACCTTCATTATCCAACTGGTTACCATGCCTTACATAATGGAGTTAGTACTTGTGAGTAGAAAGACTTTAGGTAATGGAAATATAAATAAGAATGTTTAACATAATATGCTAAAAATATTTTCATATTTAAATAACATACATAAAGGGTGTGCTTTCTGTGTTTTATATTATTGTGCAAATCCTTTTGCCCTTTAAAAGGCTGAAAATCTTGCCATCTGACTTATCATGTTAGAGTTATAAAATAGCATTTTTGTACAAAAGTCTATTCAGTTCACTCATTAGTTTAACATTCATTGAGTGCCTGCTGGGTGCAAGGGATTCAATTTATGCCTATTGATATCTGTGGACCAAGATACTAGTTTAGTTAAATACTTTTCCCTTAAATCTGTTAGGAAACACTTTGAAATACTTAAGTGCAAATTTTTTGTGTGTAAAATTTAGTTCTATCTTCATCTTTAGGTGAAGTTTTAAAGCACTTTGTAGTTCTCTATTGCCAACAGATTAATGTTTTATGTGTTGCCAATTCTTGCAACCACTGCCCAACGAACCTGTGGGTTGCAAATAAGAAAATTCCAAACACGTTTCAAACAGGAACATTTTATTAAGACCCCATCACCTGTTCATGCTCATTGTGTTTTTAGAATTTTTTTAAAAGCACTTTTTTCCATCACATTGTAGATGTCTGTATTCTCATTGGAAACGTCTGTTTAGCTTTATAAGACATTTTGCTGAAATATGAAATTGAGCCTTATTGACAATTAAGTGCTTATTGCAGCAGGTGGTCAAAGAGTGACTAATACAAGACCCGTTAAGAGTGTAACTACGTCTGGACCATTCCTGAAGTTTTTCTTACCAACAATGCCATCATGCCTTGAGTGTTCATTTCTCCCAAGTGCTATTCCTTAAACATGAGTTTACCAATTGCCTAATTATGCAATAAAAATTGCTTTGAGATGGCTAACTGCCCACAAAAGTGGTGAAAATCAAACTCGAAATGCTTATAAAAAATAACTTTCTTCCTGTGTTTGCATTTGTTGAGTCTTACAGATGGGAGGAAGCAGGTGTCCCTCCTCAATTTTTCAGATGTTCTGAAAGGAAGATAATTCTGTTAGCCAGATGGGTAAGCTTCTATATCATTAAGTTGTGAATCCCTCATAATGAGGGAATTAAAAGTATTTATAAAGACACTGCCCTCTAAAAATTTCCTTGGATCTCTTAAGAGTAGTCTTGGTCCTGAACGTACAGTGTTACCCTTGTGTTAAAGGGTGATCCAGACGTGAGAAGCAAATAGTTGGTGCATAAGAAGGCCCTACTTGGCTACTTCATATCTACCTATAATTGACCAAAATTTTTTTAGGCCAACAATTATCATCTAGCTTTGCTCCTTCTAGTGCAAGAAACTTGTAAGCTGGGTCAGTAGTTCAACAGCTAAACAGTCATTAGTCATTGTGCATGTTAGATTTCTTTCAACTATAAAACAAATTCCAGTTTCTATTTACTTATTCATTGTGACAGTATTACTAAACAGGTAAGGATGGGAATATTTTGTTATACCGTGTATAGTGAATGTATTGTATTGTGTCTGTGAAAACTGTGCTTTAAATTATATTTTCATATGTTTTGTTCGGGACAGAGCACATTAAGTTTGAAAGCAACAGAGGTTTGTTTTAGAACTGAAGGCAACTAAATAAAATTCCTGTCAAGAAAAGCTGCTTGTAAATGAAATCACATTTAAAATAAACTGCCTCTGACCCAAAATAAACATGGCTCTTTATTTTCATTAGCATCCATTATCAAGGCCAGTATCCAGTTTGCCACAGAAACGAATATCCATTTAGTACCTTGCTTTTAGGGTGCCCAGTTTTTGGATTCAGCTGACGCATGTAGATGTCATCGGTGTTTTACATGAATCACATTGTTTTTTCTATCAATAGTAAACTACTTATAAAGCCTGGGGCTAGAAGCTACCTAAAAATAGGTTAGTATGAACAATTTCATTTCACTGGTAGTGAGTAGTCTATACTATTCAAAGTATACTTTTAGGTTAGCATGGTCTACAATTATTAACTGTTCCTACTGTTGAACATATTTTACCTGAATATATTCTGCTTAGCCTATAACCTATCCTGAAGCTTAAAACATGGATTCCTCACAACAGCATCCCAGATCTGCCATGTCCTAACATCTGGCACCTGACTGCCTAATACTGTTTTGCCCCAGACTCTAACCTTTTAAAGGAGTTCAATGATACACAAATACAAGTCAGATGGTGTATATACAACTTACATATAGCACTTCATAATATCTTAGGTAACTAGTATGCTTAAGACAAGCTTAAGTATTTTAGTAACTACAAAAAGAAAAATCAAAAAGTCTGTATTTTAAATTCTTAACATTTATATTCTAAAAGAGTACTATATTTCAGAAAATTCAAGACCCAGGACCAAAAAGACATTCAAGATGATCACAAATAGATTTGAGTGAAATTACATACCTCTAAAAATGTGTCCACTTTAATGTCAATACTATACACATCAAAGACATAAAAAATACATTAGTTTGATTTGGGTTTATGCATTACATGTTTAATCACTTAGAACATTTTTTTAAAGTTACACTCTTATCAGGAAAATGAGGGAAAAAAAATACATTTTC EMBV3_05451 TGCACGTGATGTCCGAGAACATCCTCACAGAGCCGAACACGGTCAGCTACAGCCAGTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25090 GATAAGATGACCCCTGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAACGT Gene GeneID:535683|PSMD14:NM_001076067:121_cdna Constitutive 0 NULL GeneID:535683 2 GENE PSMD14 MGC139782 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 EMBV3_30394 TCGTTCTGAGCCGAGGAGTATTTTTGAATATGAACCTGGGAAGTCCTCCATTCTGCAGCA Gene GeneID:614391|SORBS2:NM_001079787:79_cdna Constitutive 3 NULL GeneID:614391 27 GENE SORBS2 Argbp2 MGC157359 sorbin and SH3 domain containing 2 EMBV3_15195 CTGCCAACATCACCATTGTGGAGTCAAACGCCACATCCACATCTACAGCTGGGACAAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41505 TAAGCCTCAGAAGCAGTTTGTCCATGTTACTGTCGCTCGGGCCTGACTCTGTCTCTGGCT Gene GeneID:767983|SDHAF2:NM_001077045:130_cdna Constitutive 2 NULL GeneID:767983 29 GENE SDHAF2 MGC128747 succinate dehydrogenase complex assembly factor 2 EMBV3_40600 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38614 CGCCTTCATGGAACATGAGGCTTCATTTAGATGCTGCCACTCTTATAGAAATCAATCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18992 ATGTCTGTGGTCTCCGTGGAGACCTCGGACGACGGTGACGACGCGGACGGTGCAGCCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11501 CGAGCCCCGACCACCGCGAGGAGGAGGCGGATGTGAGGTGAAGATCAGCCAGCAGCCCTC Variant GeneID:505908|PDGFA:NM_001075231:95_cdna 648^716 1 EMBV3_30760 GeneID:505908 25 GENE PDGFA NULL platelet-derived growth factor alpha polypeptide EMBV3_01824 TCTCCTGTCTGGTGGTTCTCTTCATTGTGGATCCCTACCACTCGGTCAGGGTGGCGGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37029 TGCTGGAGCCACACACCCAAGCCACCCTATCTTTTGACCTTCACCTCTCTGAGTCCAGAA Gene GeneID:785001|TMEM202:XM_002690532:569_cdna Constitutive 1 NULL GeneID:785001 10 GENE TMEM202 NULL transmembrane protein 202 EMBV3_14259 TTCAGTGATAGTGTCTGTTGGCTGGACTTTGTGTCTATAGAAGCTGAGGTCCATCAATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05676 TTCTTCTTCAAGCGCTACCTGGACTATGAGAAGCAACACGGCTCAGAGAAGGATGTGCAG Gene GeneID:526867|PDCD11:NM_001102103:168_cdna Constitutive 0 NULL GeneID:526867 26 GENE PDCD11 MGC152599 programmed cell death 11 EMBV3_18291 GTTCCTCTCTAGGATCTCCAAGTGAACCACCACAGACTCTAGATCTCGTTAGAGCATTGC Gene GeneID:504355|RPRD1A:NM_001075156:70_cdna UTR3_Alt 2 NULL GeneID:504355 24 GENE RPRD1A MGC139907 P15RS Regulation of nuclear pre-mRNA domain containing 1A EMBV3_28428 CGTTCAGCTCTCCGGTGGGACAGCGCATCGTCCCAAAGATGCCTTCCGAGCCGTGAAGAA Variant GeneID:504912|TOM1:NM_001035015:10_cdna 107^191 1 EMBV3_42594 GeneID:504912 5 GENE TOM1 NULL target of myb1 (chicken) EMBV3_36762 GTGCTTCATCCAGGGTTGGAGCAAAGAAGGGACTTAAGTATTGAGGAGCAGTCAGAGTGT Variant GeneID:282335|RABGEF1:NM_174591:221_cdna 347^516 1 EMBV3_00238 GeneID:282335 25 GENE RABGEF1 MGC128930 RABEX5 RAB guanine nucleotide exchange factor (GEF) 1 EMBV3_42748 CATGCTACAGTATGAATGACTACACTTGGCTTGGTATTATAAGCTCTAGTTATATTTGTA Gene GeneID:616996|CCL22:NM_001099162:444_cdna Constitutive 1 NULL GeneID:616996 18 GENE CCL22 MGC152608 chemokine (C-C motif) ligand 22 EMBV3_38422 GCTATAATACCTATGCCTCTGCGATACACAGAACTGAAAAGACGGGGCGGGAGTGGTACG Gene GeneID:536771|FGF5:NM_001078011:7_cdna Constitutive 1 NULL GeneID:536771 6 GENE FGF5 FGF-5 fibroblast growth factor 5 EMBV3_13925 ACCTCATCGTCGGCAACTCCTACACATTTCGAGTCTTTGCTGAGAACCAGTGCGGGCTCA Gene GeneID:538875|MYBPHL:XM_002686152:279_cdna Constitutive 0 NULL GeneID:538875 3 GENE MYBPHL NULL myosin binding protein H-like EMBV3_41681 AAGTGCTCAAGGATGACAAGATGGGCCTCAGGCTCCTGGGCACCAAGTACCTGGAGGTGA Gene GeneID:540233|WFIKKN1:XM_002697902:507_cdna Constitutive 0 NULL GeneID:540233 25 GENE WFIKKN1 NULL WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 EMBV3_09760 TTTTGTTTCCGTAAGTGGGGGTGTGGGGGATGCTGAGTGTCTGCATTTCTAACTAGCTCC Gene BVT0102_138971 + 0 NULL GK000006.2:95441927-95805272 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205873 1 XLOC_124771 Coding TCONS_00205873 XLOC_124771 Coding Coding NAA11 6:95792711-95806116 = TSS153636 5802 1 TCONS_00205873_2 229 0.175456739055498 2 0.567293345270069 0.000221243692486779 0.000431273508944896 0.000533814756454092 0.000211935215369218 0.000539962792472784 0.000206226377755962 0.000483051445620446 0.000572918410302533 0.000380658311521175 0.000523613751834212 0.000322046108457948 2.81110229509838e-05 0.000104222455723259 0.00102665364461019 0.000325644473335195 0.00335887723645474 0.00165253090311122 0.00750159225293415 0.000626109280149938 0.00018020717671071 0.000387006473508202 0.00321177247295026 0.00241324175480647 0.00240270752927695 0.000336070875737572 0.000855291730938686 0.000375812508943988 0.000523411411686153 0.000512578855156646 0.00155673421255213 NM_001206411.1 NAA11 Bos taurus N(alpha)-acetyltransferase 11, NatA catalytic subunit (NAA11), mRNA. 0.0 2432 100.00 0.232161323681489 NM_032693.2 NAA11 Homo sapiens N(alpha)-acetyltransferase 11, NatA catalytic subunit (NAA11), mRNA. 0.0 1314 80.92 0.231988969320924 TCONS_00205873_2 sp|Q9BSU3|NAA11_HUMAN NAA11_HUMAN N-alpha-acetyltransferase 11; 1e-149 421 90.87 0.951965065502183 4 coding 0 0 0 0 -0.069645061728208 0.508217762790342 0.0609404712277255 0.462761235035704 GTCATCCCGCCTTCCCGCCAACCAGTCTCCGCACTCGCCAGCCCGGCAGCTTCCGCCCCGTGGACTCAAACTCCACCAAGGCAAACAGGGCTTGGCGGCTATAGCCTTTCTCACAGTCTCCTCCGTCAGAACTGGCTCGCTGCTTGCCGCCATCATGAACATCCGCAATGCTCGGCCAGACGACCTGATGAACATGCAACATTGCAACCTCCTTTGCCTTCCCGAGAACTACCAGATGAAATACTATTTCTACCATGGCCTTTCTTGGCCCCAGCTCTCTTACATCGCTGAGGACGAGGACGGGAAGATTGTGGGCTACGTCCTGGCCAAAATGGAGGAAGACCCAGATGATGTCCCTCACGGACACATAACCTCACTGGCTGTGAAGCGTTCCCACCGGCGCCTGGGCCTAGCCCAGAAGCTTATGGACCAGGCCTCCAGGGCCATGATTGAGAACTTTAGCGCCAAGTACGTGTCCCTGCACGTCAGGAAGAGTAACCGGGCAGCCTTGCACCTCTATTCTAACACTCTTAACTTTCAGATTAGTGAGGTGGAACCCAGATACTATGCAGATGGAGAAGATGCTTATGCTATGAAGCGGGATTTGTCGCAGATGGCAGATGAGCTGAGGAGGCAGTTACAGCTGAAGAAGGGCGGGTATGTGGTGCTGGGCTCCAGGGAGAACCAAGAGACCCAGGGTAGCACACTTCCTGGTTCTAAAATGGCCTGTCAAGAGAAGAACCCGGCCACTGATGGTAGCGGGAGTGACAGCAAGGAACCCAGTGAATCCACGGAAAGCCCTGATGCCCAGGACAGTTCAGAAGACTCCAACTCCACCTCCTAGAGCCTTCTTAAGCATTGCAGGTCCTCGTGTCTCAACCACATCTGGTCTCTGAGTCCTGGCTTATCCCGTGAACTCTGTAGCATCTGCTCTGGGGTCATCTCAGGCCAACCCCAATGGCTTCTCACTCTCAACCTTCCACACACCCCACCAGGATCATGACGGAATACGTGGACACAAGAGCCTGCTGTGCAAGTGCCAAGAAGTTTGAGGCCTGCCATCACCGAACCTTTCCTGGCCTGCTCACACCATGCCTGCCATTTTATTGTGTTTGTAGTAGTCCTTTGTTGGGTGTGGTTGTCTTGTAAGGTTGTCCCTTCCTAAAATACAGAACAGGAAACAGGGAAGACTCCCAAAGCTCCTAGGCTTTTAGTTTTTGCCATTGTTCCTCTGGGTTTTCATTCTTGAGGGGGTGGTCAGGACCATCAAGTCAGACCTCATGCCCCCTTCCTCTTCCTTTTTCACCCCTTCTCGTTGAAGTATTCTGTTTCCTCTTCCTTTCTCCAGGAACCTGTCCGCTCTCATGTCCTCTCCTTTCTTGAAGAGGTATTCTCCTCCTTCCCAGGGGGAAGAAGTGGTAAGGGCTTCTATTATGCAATCAGAACTTGGAGATTTTAAGAAAAGGACAACCAGTAATTAAATTGGAATATCTAATATGCTTGTTAGTGTCTTTTTTTTTTTTTGGTTAGTGACATAACTTGCTGTTTATTGAGAACCTATAATGTTTAGGCACAGTTCTAGGGCCTTTATTACCAGTATATTTAATCCTCTCAGCAAGTGGGAGGTAAGTTTATTATTATCCCTATTTTATAGATGGGGAACCTGAAGTCAAGGAGGCGAAGTAAATTTCTAGGACCTGAACTCAAGTTATTTGAATTCAAAGCCAAAATTCCTTTCACTTTCCTCTTGCTCCTTTTTGCATTTTATTTACAAAAGTGTGAAAACAATAGCAAAAAAAGGGAGAATCGAGTTTTAAAATGTGTTAACACGTGACAACTATATGTCTTTTGTAAATATTTATATAACCCACTGTTATAATCCTGTTTACTGTTTTCCCCAGTAAAAATAAGTAAAGGCAAAACATTTTGACCACTTTTGATGCAGTGCAGCAGAGGTCACCAGATAAAATCCAGTTATCATTACTTAATGTTTTTCTATTCACTGAATGTGAATTACCATAGCATGTAGTTTTTCTCATGTTTAAATTTTTATGAAAACTAGTGTGTATGGTTTAAAGTTAAAGCCCTGACATTAACCATCCGATGACAAGAGAGAAATCTGTTCTCTGTAGTCATAATTAGCCCTTCTAAGCTCTTCTTACAAATCTACTCTAAGAATGTACTCTTAAGAATGCCTGCCTAAAAAAAAAAAAAAAAAAAGAATGCCTGCCTAATAGGAAATGATTGCCTGAGGCAGACATAAAAGTTTTTTCCTACATGAGGATTTGACAATACAAACCTCTCATCCATCTTTCCATCTTTACTGTTTTTCTTTTTAATTTTCTCTCCCAACTCTAAAACTATTTTATTCCTTCCTCTCAAGCATGTATTTATCTCTTTATTTTTAAATATTACAGCTTTCTAACATCTGTCTCTAGGGCAGCATAATCTTACTGGTGAAATATTCCATGTTTTCCTTGAGCCCTTGTCAATATGTCTTCGTGTTAACAGCTTAGCAGATGGAGAAACAGAAGGAGTAGCCTCAGCTTACCTGAATGATTTCTCTCCGGCACCCGGCACATGACTGTCTCTACTAACTTGATGATAGGAACTGGAGTAATTGGAAGATAAGAAATGATGCCTGACTTTTGCAGTGTTGTTTACCAAAACTGTTGGCAGCTTTTTTATGTTACTGTTAGATCCTTTTTCCCAGTCTCATACCAAGAGAAGACAGAAGTATAGCAACCTACCTGGTTCGCACTGTGCCTACTTAGATAATGAAAGTAAAATAATAATAACTAATATCGCTTTGGGCGTAAATTAGCATATTCCCAGGTGGTTCCAGGGTAATCACCGTGGTTTAGCAGGAGCAATAGCTTTCTGCAACAGAAAATGTGGGAGCCTGGGATACTGCTTTGTGTAATAGCATTGTTCTTTTTACATGGGGCTTATTATTATTTAATGGGCTGACTGCTTTTTACTTAAGTATTGGGTTGGCCAAAAGCTTCATTTGGGTTTTTCCATAGGATGCTGTGGAAAAACCCAAGTTTTTTTGGCCAACCCCGTACAAACCGAGAGAGGCCAAAGCAGGACATTGAAACAAGGATGTAGGAGAGTCCGTGGTGAACACCCTTGGACTAGCTGTAGGAAATGACCCACACTGGCTCCTGTACTTGCTGCTTTAAAGAAACTATCTGGGTGGGCTAAGGTCTGTGAGCATATTGTTCAGAAACACTAATCATCAAGATGCAGGGTTTTCTCTGGCTAATAGAAACTTGTGAATGAAGTCTGTGAGTTTCCTAGTTGGAATCTGTGTTTTCCCTTTGGAGATAAGAATAAGGAACCGAAAGTGACTGAAACAATAATGGGGAAGTAGATATGTGGGAGGAGCAGAGAGGGGTGCTGGAAGTTAGTCCAAAGCTGAGTAAACTAGGAAAGGATAAGGACTCTGAAATAGCTGAAAGAAAGTTTTCTCAAGCTTTTACACGCAGATGGGTCATTGGGGACCATGTTAAAATGAAGATTTTGTTTCCGTAAGTGGGGGTGGGGGGGATGCTGAGTGTCTGCATTTCTAACTAGCTCCTGGACAATGGGCAATGCTGATGTTGCTGATCTAGGTATCACACCTTGACTTGTAGATGTCTTAACAGTTATCTCGAAATATGGAACTAGTCCAGAATACCTGTGACTGGCCTGTAGGTTGGTTTGTATTAGACTCCAAATAATTTAGAATCTCATTCTTAAATACACATGCAAATGTTGCTTGTCTTAGGAATTTTGTCATATGAGGTTGATGACCTAATGATTTCAATAAAAATTTCAAACCTGTTTCATCAAAATGTGTAAAGCAAAATTTATATATACAGTATATGAGCTATAGTGATAATAATTGACATCTTCTATTATATTAGAAGGTAGGCTCAGCAGGTAAAGAATCTGCCTGCAATGCGGGAGACCCCTGTTCAAGTCTGGGTTTGGGAAGATCTGCTGGAGAAGGGATAGGCTACCCACTCCAGTACTCTTGGGCTTCCTTGATGGCTCAGCTGGTAAATAATCTGCCTGCAACATGGGAGACACGGGTTTGATCCCTGGGTTGGGAAGATTCCCTGGAGAAGGGAACAGCTACCCACTCCAGTATTCTGACCTGGAGAATTCCATAGACTGTGTAGTTCATGGGGTCAAACGGTCTCAAAGAGACTAACTTTCACTTTCTTTGATATGTTAATATTTCCTTCCTCATCTTTGACTTCCAAACAAATGACTGGGTAGATGAGATTTTTGAACTGTCACTCAATTTATTGTGTTTGTTGATCCATAGATTACTCCAGACACTAAGAATGTTTCCCATGCTGATATTTGACATAGAATTTGAACATGAACACATTAAAAAAAGAGAATATGAGATCTTTATGTGGGTTGAAGTGGTGTGGGAAACAATTTCAAGAAAAAATTTCTCATCCAGGGATAAGAATTTCTAGCCCAGGTTTTCTCAAAGTACAATTCATCAAAGTCACCCAGGTGCTATGTTAAAAACACAGTTTCTTTCACTCCAGCTCAAATTTACAAAACAGATTGTGTATTTTTAACAAGCCTCCAGGTGATTGTTTTGTATGCTGCCACCTGAAAATCATTGACTAGTAAGACATTGTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAACCCCATGGCTGGAGGAGCCTGGTAGGCTCCAATCCATGGGGTCACTAAGAGTCAGAGACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCTTTGGAGAAGGAAATGGCAACCCACTCTAGTGTTCTTGCCTGGAGAATCCCAGGGACGGAGGAGCCTGGTGGGCTGCCGTCTCTGGGGTCACATAGAGTCAGACACGACTGAAGCGACTTAGCAGCAGCAGTAAGACATTGAATTCATCATGAAGGTAATTTGAAGGGCAATTTTCCCATGGTGACACTCCAAATTTAAGTTAATTTGTTCAAAGAAGCATTTTGCTGTTGTCTTTCTATTACTTGCCTGCCCATCCTTTCCCCAGTCCTCCCTTTTCAACATCAGTGTCCCCTCCCTTTTCCTAGTTTTATCTTTGTTTTTTGTCTCCAAGCCAACAATAACCTGTAGTTTGGCAGTAGTGGCATATAGCACAGACGTGCAGAATCAGAATATTCACAGATACTCTCACTGAAATTTTCTTAATTTCTTTCCAGAACAAGAAGCTAAAATACTGCAATGTCCATTTACAAGTCAGATACCAGGCCAGTCTGGAATCACAGGCTCTTCTACTCCTGTGTCATTCGTTCCTCATAGCCTTTCATCATCTGGGTATTCTGAGTCAGAACTGTTATTAACGGTACTTGGCCAAAAACCTGATGAAACAGACCAAGTGACTTATCACAGCCCTTCTTAATACTTTTTCCTAGACATGAATGCTTCTTTGAAATCTTAAAAGACACAGATCATTTCCTTGAGGCACACTTGAAAGGTAATTTAAACAGCTTGTTCCCTTATATGGATATAAAGATTAAATTTTGTGAAGTTCTGCAAAAAAAAAGTCCTTTCATTATAAATCATATATATATTGCTTTCACACCAAAATTAAGATAGATTTTGTGTAAGGTCATCACCTCAACTGCATATTTTAAGACCTTACTTAGAGAACACAGTCCTTAGCAAGTAATTGTCACAAGAAGTGGTTTAATAGAGTGAGAAATCACAGACCTGAGTCCAAAGGCTTAAATTTTAGTCCTAGTTTGGCTTATTACTACCTGAATATCCTCTGGCATGT EMBV3_28680 GAATAGGGTAAGAAATAAAATGATGCTTCTTCAAAAAGGTCCCCCATCAGGACCAAAGGC Gene GeneID:510133|TMEM215:NM_001101071:46_cdna UTR3_Alt 1 NULL GeneID:510133 8 GENE TMEM215 NULL transmembrane protein 215 EMBV3_18731 CCGGGGGCCCGGGCCCCGGCCTGGCGGCAGCTCAAGAGCTTTGACCAGTTCACCTGCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14772 AGGGCCCAAACACAGTTCCCTCTGAAAGGGGAATGACCCGAGTGGCCAAAGAATGTTCAT Gene GeneID:504617|ATRNL1:XM_002707788:192_cdna Constitutive 0 NULL GeneID:504617 26 GENE ATRNL1 NULL attractin-like 1 EMBV3_29346 CCCACTCAGGGGCAAGGGGCCTGGAGTCCTTTTGGCTCAGGAAAAGCATTTTAAAGAAAA Gene GeneID:618369|LOC618369:XR_084694:57_cdna Constitutive 0 NULL GeneID:618369 5 PSEUDO LOC618369 NULL similar to Lactosylceramide 4-alpha-galactosyltransferase (Alpha-1,4-galactosyltransferase) (UDP-galactose:beta-D-galactosyl-beta1-R 4-alpha-D-galactosyltransferase) (Alpha-1,4-N-acetylglucosaminyltransferase) (Alpha4Gal-T1) (Globotriaosylceramide EMBV3_25794 GGAAGCGGGAAACTGAGATATTTGTGAGACTGGAACTCTTAAGGACTTTAGCCAGATGTG Gene GeneID:782956|CCDC126:NM_001082472:47_cdna UTR3_Alt 2 NULL GeneID:782956 4 GENE CCDC126 NULL coiled-coil domain containing 126 EMBV3_26235 CCACTCCAGCCAGCTGCACCTTCTCCTTAGGCTCTCTGTAGCCTTCATCTATACCAACAT Gene GeneID:100298603|LOC100298603:XM_002683970:2_cdna Constitutive 0 NULL GeneID:100298603 Un GENE LOC100298603 NULL hypothetical LOC100298603 EMBV3_31552 AGCCGGGACGGCTTCCCAGGTTGGGGTTTAAATTGACTACGTTTATTTCAGTCTGAGCCT Gene GeneID:534141|AVL9:XM_002686833:25_cdna Constitutive 2 NULL GeneID:534141 4 GENE AVL9 NULL AVL9 homolog (S. cerevisiase) EMBV3_43694 AGACCATGAGCGGAGGCCGACTTTTGCATTAACTTCAGTAACACGAGCTTCGCCAGATAC Gene GeneID:505840|RILPL1:NM_001075226:60_cdna Constitutive 0 NULL GeneID:505840 17 GENE RILPL1 MGC140677 Rab interacting lysosomal protein-like 1 EMBV3_09365 ACCATATTTCTCAGGATGTCCTTGTAGCCTTTGACTGGCCTCTGTGTTCCTCGGTTCACC Gene BVV0102_184429 + 0 NULL GK000009.2:61254556-61291440 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237455 TCONS_00237460 TCONS_00237452 TCONS_00237454 TCONS_00237453 TCONS_00237461 TCONS_00237458 TCONS_00237457 TCONS_00237456 1 XLOC_144727 Coding TCONS_00237453 XLOC_144727 Coding Coding CASP8AP2 9:61232649-61284639 j TSS177516 6045 1 TCONS_00237453_7 1976 11 0.883936986670257 0.00339998717002844 0.00357498660635018 0.00320955532425482 0.00216001297569104 0.00222355175500549 0.00119565923664823 0.00137453442340031 0.0023406558619149 0.002122288832729 0.000864021985455314 0.000147067411129622 0.000147915517144079 0.000188036296804208 3.78929074257837e-36 0.000113160083368188 0.00267710684868172 0.0011469264840456 3.75925457807666e-06 0.002202584417689 0.00395492375769976 0.000232616856006901 0.000758744057549174 1.32696198035007e-71 2.87082624540197e-05 0.0027949631986928 0 0.00298304791291723 0.000258590511835114 0.000430958492708647 2.49563964450361e-39 XM_002690191.3 CASP8AP2 PREDICTED: Bos taurus caspase 8 associated protein 2 (CASP8AP2), 0.0 1.082e+04 100.00 0.992224979321753 NM_001137668.1 CASP8AP2 Homo sapiens caspase 8 associated protein 2 (CASP8AP2), transcript 0.0 6538 84.10 0.986600496277916 TCONS_00237453_7 sp|Q9UKL3|C8AP2_HUMAN C8AP2_HUMAN CASP8-associated protein 2; 0.0 2907 76.87 0.997975708502024 0 coding 0 0 0 0 -0.105527570336665 0.362969959428869 -0.00324985235841391 0.948067041020653 GAGACCAGAGTGTCCAGAGAGGATCCCAGGCTGCTTTGGGCCAGGCGGGGCGGATGGCGACTATCAAAAAGAAATAGGATCATGGCAGCAGATGATGACAATGGTGATGGAACAAGTTTATTTGATGTCTTTTCTGCTTCTCCTCTTAAAAATAATGATGAAGGTTCTTTGGACATATATGCTGGGTTGGACAGTGCTGGTTCTGACAGTGCATCCAAATCCTCTGTACCATCCAGGAATTGTTTGGATTTATATGAAGAAATCCTGACTGAAGAAGGAACTGCAAAGGAGGCAACATATAATGATTTGCAGGCAGAATATGGAAAATGTCAGCTGCAAATGAAAGAGCTGATGAAAAAGTTTAAAGAAATACAGACACAGAATTTTAGCTTAAAAAATGAAAACCAGTCCCTTAAGAAAAATATCTCAGCACTTATCAAAACAGCCAGAGTGGAAATAAACCGCAAGGATGAAGAAATAAATAATCTTCACCAAAGACTGTCAGAGTTTCCACATTTTCGGAATAATCATAAAACTTCAAGGACATCAGATCTAGTTAAAACAAAAGATCTTAAATCCAGATCTCCCCATTTGGATGACTCTTCAAAGACTGATCACAGAGTGAAAAGTGATGTTTCTAAAGATGTACATTACAGCACTTCACTGCCAAACCATGAAAAGGAAGGAAAATCACACTGTGAAAAAAAGAGCACTTTGCATTTGCCTACATCTGTTGAAAAACACTCCACCAATGGCATTTGGTCACGTTTCCATTATCAGGTTGGTGAGAGCAATTCAAATGAGGATCATAGAAGAGGAAGGAAAGATAGTCGACATAGCCAGTACAACCGGGGGACTGACAGAATACGAAAAGACTTGAGCACTAGCTATGGTGATGGTGAACCGAGGAACACAGAGGCCAGTCAAAGGCTACAAGGACATCCTGAGAAATATGGTAAAGGTGAACCAAAGGCTGAAAGCAAAACTGCAAAGTTGAAAAGTAACACGGATTTAGATTATAAAAATGAACGCATCAGCTCTTCTTGGGAGAAAGAAAGCTCTAGAGACAAGTCACACACTCGACTAGAATCTCAAAGTGACAAAAAACTCGAAAGACAAAGTGAAAGGTCACAAAATGTAAATAGAAGAGAACTTAAATCACAAGACAAAGAAGAAAGAAAAGTTGATCAGAAGTCAAAATCAGTAGGGAAAGGCCAGGATCATTGGAGAAGATCTGAACGAGCGGTGCTTCCGCATTCCAAAAATGAACCATCAAAGTCTTCACACAATTCAAATAAATACCATCTAGAGGAGAGAAGAGGCTGGGAAGATTGTAAAAGAGACAGGGCTGTAAGTAATCATAGTTTTCAAGAAGGAAGATGTCCCTCTTCTCTTTTAGCCAGTAGAACTCACAAACACATTGATTCCACAGAAGTTGATTCTGTGCACCAGCGGGAAAATGCACCTTTCAGAGCAGAAAGGCACAGAACTGAAGAAAAAAGGAAAAGGGAACGAGAGAACAAAGAAGAAAATAAGCATATCAGAAATGAAGACAGAGTACCTCCAGGACATTTGCAGAAGACTAACAAAGAAACTAAGAAAACCACCGCAGACTTAAAGAGACAGAATGAGCCAAAAAATGGTAAAGGGGAAGTCTCTAACAATGATGTTTCTGAAGGAGCAAATAATAAGGAGCCAGCAGTTAGAGCTGAGAGTGCCCTAAATGAACCACAAAACAAAGACTTAAAGTTGAGCTTTATGGAAAAATTGAACTTAACTCTTTCTCCTGCTAAAAAGCAGCCTGTTTCTCAGGATAATCAGCATACAATAACGGATCCTCCCCAATCCTGTGACATATGTGATTCTGAGTCGTTGGTGCAGGCTAAGACTGTGACATGTGTTCCCTCTGTCAGTGACCATATCACAGAGGAAACCAAATCTGAGTTATTGGAACCAAAGGATGCTCTTACAGCAGCATTTCAACCCAGGACCAGTATTTCAGAACGGAAAGTAGAAGAAAATAGTTTGTCTGTTGCATCTGTGGAGAATACTGTGCCTTGTGACACACCCATATGTGGCACAGAGACTTCCTTCTCAGCACCTGTGGAAATGGAACCATCAGAATCTTCGTTATCTTCATCCACAGAAATGAAACAGACTGTTAATGGTGCCAGGGCAGCAGTTCCTGTGAAAATAGACATAGTACAGACAAATGTTTCTCAGAACGTTGGCTTGGAATTGGATAGCAAAAGAAACGGTGACTTAAATTCTTGTAGTATTTCTGAAGAGGCAGAAATGAAGGAGGCTTTTTCAACAAATGTGACCAAATCCAGTGAAAGCATTTTGCAGCCTTCAGTTGAAGAAACTGACATTCTGCCAGCCGTCCTTTCAGAAGGTGGTACACCAAAACTTGAGCCTTCTCTTGTAGACCCACCACTGGTTGAGAATAAGTCTTGTCATTTGGATCCTTGCTTACCTAGAGAGACTCCAGAATCTTCACTTCAGCAGACTGAGTTAATGGATGACACAGTGGAAGTTGGTGAAACAAACTCAGTATATCATGATGATGAGAACTCAGTTCTGAGCATTGACTTTAATCAACTGAGACCTATTCCAGAAGCCATCAGTCCTCTGAATAGTCCAGTGAGACCTGTAGCAAAAGTTCTTAGACTGGAAAGTGCATCTCAAGTTCCATTATATAATAATAATCATAAAGATGTGTTTCTACCAAATTCAGCTCATTCTACCTCCATGAGTCAGTCTGATCTCAACAAGGAAAATCAAAAGCCAATATGCAAATCTGACAAATTTGCAGAAGCAGACTCCCATAAGAATTCATCTTTAGATGAATTAGAAGAAGGAGAAATTATAAGTGACAATGAAAAACCTGAACCACAAAGAAGTTTTGACAAAAGTGCCAAACCAAGAGCTTCTACAGAAGTGCAGAACACAAAAACTAGCCCAGAAAGTAGGAAAAGCTCTGTGCGTTTGGATAAAGACAATAGGAAGATATCCTCTATGAAAATGCATCAGACCAAAAGCAGATGGAACAGAAGACGAAGTGAATCTAGCAGATCTTCAAAAACAGAGAAGAAAGAGAGGTCAATGAGCACTTCCAGCCTGGAAAAAATAGTTCCAATCATTGTCACACCCTCTTCTGTCCGAGAGATTATGCACATGTTACGAATGATAAGAAAACATGTTAGGAAAAATTATATGAAATTCAAGGTAAAATTTTCATTAATACAATTTCATAGAATTATTGAGTCAGCAATTTTGAGTTTTACATCACTAATTAAATACCTGGACTTGTCCAAAATATCTAAGTCAGTGACTACTTTACAGAAGAATCTCTGTGATGTTATAGAATCCAAACTCAAGCAAGTTAAAAAGAATGGCATTGTGGATCGTTTATTTGAACAGCAGCTGCCAGATATGAAAAAAAAATTGTGGAAATTTGTAGATGAACAGCTCGATTATTTGTTTACAAAACTTAAGAAAATCTTTGTAAAGTTTTGTGACTCCATGAATGTTGGCAGTGATAGTGACGAAGGAAAGCTTGAAAAGAAAAGTAAAGAGAAAGCACGATCTTCACACTGTCAGAAGGGGAATATAAACAACTTGGGCAAAGAAATGTTGAAAGAGAAATCCCCCAAATCAGAAGATTATGGTTCTTCTAAGTATTCAGTAGGTTGTAAAAAATCTGAGGAAAAACATCAAGAGCAAAAGAATTCCAATAGTAACACAATAAAGCATGACATTAAAAAGACTGCTAACACTTCCTTTGATAATATGAAGAATCCTCAATCTGAAGCGCATTCCTTGGAGCCAAACTGCCTGAGCACCCCAAAGCCAGGAAAAATTGAAGGTAGCGCCACAGAGGATGCCCAGACATCCCAGCTTGTGCCTTTGAAGCCAGAACGCAGTTTTGAGATTCTTACTGAACAGCAGGCGTCTAGCCTTACATTTAATTTAGTGAGTGATGCACAGATGGGAGAGATATTTAAAAGTTTGTTGCAAGGTTCTGATCTTTTGGACAACAGTGTTAACTGTAATGAAAAAAGTGAGTGGGAGTTAAAGACACCAGAGAAACAGCTGCTAGAGAGTCTCAAATGTGAATCTATACCAGCTTGTACAACTGAAGAGCTCGTTTCAGGGGTGGTTTCTCCCTGCCCTAAGATAATCAGTGATGACAACTGGTCCTTACTGTCATCTGAGAAAGGTCCATCTCTGTCTTCAGGGCTTTCATTGCCAGTTCATCCGGATGTGTTGGATGAAAATTGTATGTTCGAAGTGTCCACTAACATAGCTTTAAGTAAAGATAATGTATGTGGTTCAGAAAAGAGCAAGCCCTACATTTCTTCCATACTTCTTGAGGATCTAGCCGTCTCTTTAACAGTACCATCGCCTCTGAAGTCAGATGGCCATCTCAGTTTTTTAAAGCCAGAAGCTTTGTCTAATTCAACGCCTGAAGAAGTTATTAGTGCCCATTTTAGTGAGGATGCCTTACTGGAGGAAGAGGACGCATCTGAACAGGATATTCATTTAGCCCTGGAGTCTGATAATTCAAGCAGTAAATCAAGTTGTTCTTCATCATGGACAAGCCGGCCTGTTGCTCCAGGCTTTCAGTACCACCCTAACCTCCCCATGCACGCTGTCATAATGGAAAAGTCCAACGATCACTTCATCGTGAAAATTCGGCGTGCGGCACCATCTACCTCCCCTACTCTTGTACAGAATACAGTGGCTGATGAATATCTGCCGAGAGTGGAAAAGGAAGCTGATGAAGCAGTGGAGGAAGAATATATTTCATGTCAGAACAGAGTTTTTAAATCTGTGGAGGAACTGAAAAATTCCAGTAAGAATGTTGATGGCAGATTAGTTCATGAGGAACAAGACTGTGTGATACAAACAGAAGTTCCTGACATATATGAATTTCTTAAAGATGCTTCAGGTAAAGTGAGTCAAAGTACCGAAGAGGCTGAAGAATGTTTGAAGTTGCATCAAGTATGGGAACCAAAAGTGCCTGAAAGCATTGAAGAATTGCCTCCAGTGGAAGAAATTCCACATTCTGTTGAGGATCATCTTCCAAGCACATGTATAGACCTCACAAAAGATCCAGTCACCGAGACCAAAAAGTTGGGGGAATTAGTAAAAGTAACAGTTTTAAATATTGATCAGTTGGGATGTTCTGGAAGTAGTGTGGATCAAAATGCTCCAGTATTAGACAATATGCAGCCTGAAACTGTTGATACTTTTATTGATTTGACACAAGATGTTTCAAGTGACAGTAAAAATGAAGGTAACCATCCTGCTATAGTTGTTGAAGACTTGGGGTGTCCAGTGATATGTGTCGATGAAGATAACTCGAAGGAAGAAAATGTGCAGGTGGCGAACAGGCCTTTGGAATGCATCATTGAGGAGGCCTGTATCGATCTAACCTTGGAAGCTTCCAGTTTGGATGAAGTGAAAAAGGATGATTTAAACTCAGAGTCAGCATTGAATTCCAACAGTTCAGAGTTGCCTGGGATGTTGGATAACCCTCACAAAAAGAGAAGAAATCTTTCTGATCTAAATCCTTCTTCTCAGAAAAAACAGAGAAAGGAAACAGACTTAACCAGTAGGGAAAAGACCAAAAAAATTACCCAAGACTCTGGTGAGAATGGTAATGCTCATCGAAGGAAAGCCAGTAAGAAAAAGGCCCCTTCAGTGACTAAAGACCCCTCATCTTTAAAGGAAAGCCCAGGGACTAAGGATGCATCAGCAGCGTCTGCCACTTCTTTTACAAGCCTTTCTGCAAAGAATGTTATTAAAAAGAAGGGAGAAATTATAGTTTCGTGGACAAGAAATGATGACCGGGAAATTTTATTGGAATGTCAGAAAAAAGGGCCATCATTGAAAACATTTACTCATTTAGCTGCTAAGTTGAATAAAAATCCATATCAGGTCTCAGAAAGATTCCAGCAGCTAATGAAGCTCTTTGAAAAGTCCAAATGCAGAACATGCTTCTAGAACTTTCATCTATTATGAAAAAATAATCCATGC EMBV3_20366 TCGATGGGAACGTCAGCTGCCCCGTCTCTTGTGCCCTCTGTAGGAAGAACTATTTTGCAT Gene GeneID:538005|LSM12:NM_001076098:263_cdna UTR3_Alt 2 NULL GeneID:538005 19 GENE LSM12 MGC142622 LSM12 homolog (S. cerevisiae) EMBV3_17379 CCATCTTTCCTAATAGATAGGCTTTTGCATATCACCCTGCCCCGCCTCCTGCCTTCTCTT Gene BVV0102_358694 - 0 NULL GK000030.2:131983354-132048626 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41031 CTCATCAACCGTGCCCGGAAGGTGGCCGTGCTGGTCATGGGCAGGATGAAGCGTGAAATT Gene GeneID:541220|H6PD:XM_002694063:180_cdna Constitutive 0 NULL GeneID:541220 16 GENE H6PD NULL hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) EMBV3_26412 AGTGGAGGGTAGTACTTTTGAGCCACCTGGGGACTACAAGGAATAATTTCGAAGGGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09188 GTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGC Gene GeneID:534620|TAOK3:XM_002694504:393_cdna UTR3_Alt 2 NULL GeneID:534620 17 GENE TAOK3 NULL TAO kinase 3 EMBV3_19911 AGGCGAGCCTGGGAGTGGGCAGCAGGGGACTGTAAATATTTCGGCTCCACACTATTTATA Gene GeneID:534306|MADD:XM_002693539:157_cdna Constitutive 0 NULL GeneID:534306 15 GENE MADD NULL MAP-kinase activating death domain EMBV3_27373 TGTTGTGAACAGGGCATCTTCTGATGGGCAGAGAATTCCAAGTCCTTCGTCTACAGCCTC Gene GeneID:521834|NOSTRIN:NM_001046257:13_cdna Constitutive 1 NULL GeneID:521834 2 GENE NOSTRIN MGC128770 nitric oxide synthase trafficker EMBV3_20319 CGGTAGCCGCACCATCCTACATGCCTACAGGAACCTGCCAGATGTGTCCGCTAAAGACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42280 TCCTGAGGAGTTGTCCCGTCTGCCCTGCGCCACCCTGGTTCAACACATGTCGGGTATGTA Gene GeneID:516078|SNAPC2:NM_001034516:47_cdna Constitutive 0 NULL GeneID:516078 7 GENE SNAPC2 MGC127459 small nuclear RNA activating complex, polypeptide 2, 45kDa EMBV3_34309 AGAAACTTCCTGGTCCGAGCCTCTTGCCGCCTTCAGTTGGAACCTGGGAAAGAATATCTG Gene GeneID:280678|C4A:NM_001166485:15_cdna Constitutive 0 NULL GeneID:280678 23 GENE C4A C4 complement component 4A EMBV3_36288 AAAGGGAGTGTGCCCTGGCTGAATGCAGTGTTTGATAACGGGAGTGGGGCACTTATTTCA Gene BVT0101_029428 + 0 NULL GK000005.2:78966083-78983357 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192607 TCONS_00192602 TCONS_00192606 TCONS_00192608 TCONS_00192609 TCONS_00192601 TCONS_00192604 1 XLOC_117238 Coding TCONS_00192604 XLOC_117238 Coding Coding DENND5B 5:78750075-78971172 j TSS144100 8998 1 TCONS_00192604_6 831 0.0815736830406757 21 0.959397727683902 1.25215908775692e-05 0.000118057711307178 0.000217918302430402 7.43652884879728e-05 5.66049535920498e-05 5.56385474242778e-10 9.68058225707307e-05 6.69289046447321e-05 1.31204660392944e-35 0.000147045098793823 1.73033102687186e-10 3.18719420012533e-15 1.20424559904138e-58 2.99923086052212e-13 5.19870351273565e-24 0.000639462865067049 4.88132765416815e-11 0.000456801708570063 0.000269627819041098 1.26208086466942e-09 9.30194027994934e-05 0.000823986475718524 0.000629435998311935 0.000698978866066433 0.000195137640250882 0.000103797461582773 0.00017425819292726 0.000289435289428642 0.000241838930457246 2.25190159670697e-06 XM_005206831.1 DENND5B PREDICTED: Bos taurus DENN/MADD domain containing 5B (DENND5B), 0.0 1.355e+04 100.00 0.834852189375417 NM_144973.3 DENND5B Homo sapiens DENN/MADD domain containing 5B (DENND5B), mRNA. 0.0 5586 88.47 0.48588575238942 TCONS_00192604_6 sp|Q6ZUT9|DEN5B_HUMAN DEN5B_HUMAN DENN domain-containing protein 5B; 0.0 1684 97.23 0.998796630565584 3 coding 0 0 0 0 -0.244150018448345 0.331601118163746 0.0661639884917428 0.24062588903151 CGGGAGCGGGACCGACCGGGCACGAGCTCGAGGCCGCTTCCCCGGCGCCGAGCGAGGAGCGAGGCTGCGCTAACGAGCGGCGGCTGCGCGGCCATGGGCTCGCCCGGATCGCCTTAGGGCGGGCGCGCGGAGACCGAAGCCCGAGCGGCAGCCTCAGCAGCGAGTCCTCTCAGGCGACGGCGGCGACAGGAGCAGCGCGGCCGGGATGAGCGGGAGCGGCGCGGCGCCCGGCCCGGCCTCGGGCTCCTCCCCGGCCGCCTGCCGCTTTGCGCACTACTTCGTGCTGTGCGGGATCGACGCGGACAGCGGGCTGGAGCCGGACGAGCTGGCGGTTTTGTACCAATGGCTAGAAGCAGATCGTCATGGCAAGAGCCAAGATGCTGCAAATACGACTTCAGGTGAAAATTTTGACCAGAGTCCTTTGAGAAGAACATTCAAATCCAAAGTTCTGGCCCACTATCCTCAGAATATAGAATGGAACCCTTTCGATCAAGATGCAGTAAACATGTTGTGCATGCCTAAAGGGCTGTCTTTCAGAACACAAACTGACAACAAAGACCCTCAGTTCCACTCATTTATAATTACCCGGGAAGATGGATCTCGTACCTACGGTTTTGTTCTCACTTTTTATGAAGAAGTTACAAGTAAGCAAATCTGCACAGCAATGCAGACACTCTACCAGATGCACAATGCAGAGCATTACAGCAGCGTGTACGCTTCATCCTCCTGCAGCATGGATTCACTGGCGAGCAGTATTGACGAGGGAGATACAACTTCCCTTTTGAAACTCCAGCGATACAACTCCTATGACATCAGCAGAGACACCCTGTATGTTTCAAAAAGTATATGTTTGATCACACCACTGCCTTTCATGCAGGCCTGCAAGAAATTCCTCATCCAACTTTACAAGGCAGTTACCTCACAGCAGCCACCACCTTTGCCTCTTGAGAGCTACATCCATAATATTCTCTATGAGGTGCCCCTTCCACCTCCAGGAAGATCACTGAAATTTTATGGTGTTTATGAACCTGTCATCTGCCAGAGGCCGGGGCTCAATGAACTCCCCCTCTCCGATTACCCTCTCCGAGAGGTCTTTGAGCTCCTGGGCCTAGAGAACCTGGTGCAGGTATTTACCTGTGTTCTTCTGGAGATGCAGATCCTTCTCTATTCACAAGGCTAACTTGTGTTTTGTAGATATTGACAACCATTTTATTGAGTTGCCTGAAGAATTTCCACAGTTCCCCAATAAAGTGGATTTTATCCAGGAACTCTCTGAAGTTCTTCTTCAGTTTGGGATCCCTCCTGAGGGCAGTCTACATTGCAGTGAGAGTGCCACCAAGCTCAAGAATCTCGTTCTGAAAGACTTGGTCAATGACAAGAAGAATGGCAATGTCTCTGCAAATAGCATCAGCATGTATGAGTTACTGAAGGGCAACGAAACCATAGCTCGTCTCCAGGCTCTGGCCAAGCGGACTGGTGTGACTATGGAAAAAATGGACCTCTCTGCCTCTCTGAGTGAAAAAGAAAAAGACTTAAAACTGCAGTGTGAAGACGCAGAACTAAGGGACTACCAGCTCAATGTTCAGCTCCGAGAGGTCTTTGCCAACCGCTTTACACAGATGTTTGCAGATTATGAAGCGTTTGTGATTCAGACTGCCCAGGACCTGGAATCCTGGCTGACCAACCGGGAACAGATGCAAAACTTTGATAAAGCTTCCTTCCTGTCTGACCAGCCAGAGCCGTACCTGCCATTTCTTTCACGCTTCATTGAAACACAGATGTTTGCCACCTTTATTGATAACAAAATTATGTCTCAATGGGAGGAGAAAGATCCTTTGCTTCGAGTCTTTGACTCTCGGATTGAGAAGATAAGACTGTATAATGTAAGGGCACCCACCTTGAGGACATCTATTTACCAGAAATGCAGCACTTTAAAAGAAGCAGCCCAGTCAATTGAGCAGCGACTGATGAAAATGGATCACACCGCAATCCACCCACATCTACTTGATATGAAAATTGGTCAAGGCAAATACGAGCAAGGATTTTTTCCAAAGTTACAGTCTGATGTCTTGGCAACAGGACCAACTAATAACAATCGCTGGGTGAGTCGGAGTGCCACTGCACAGCGCAGGAAAGACCGCCTTCGCCAGCATTCCGACCACGTTGGGCTGGACAACGACTTGAGGGAGAAATACATGCAAGAGGCACGAAGTTTAGGAAAAAACCTGAGGCAACCCAAATTGTCAGACCTCTCTCCTGCGGTGATTGCACAAACCAACTGGAAATTTGTAGAAGGCTTATTAAAAGAATGTAGAATGAAGACGAAACGCATGTTGGTGGAGAAGATGGGACACGAAGCAGTGGAACTGGGCCATGGAGAAGCCAACATAACTGGCTTGGAGGAGAACACCCTGATTGCCAGCCTCTGTGACCTGTTGGAAAGGATATGGAGCCACGGCTTGCAAGTCAAGCAGGGGAAGTCAGCTTTGTGGTCACATTTAATTCAGTTTCAGGACAGAGAAGAGAAACAAGAGCACCTTGCAGAGTCACCAGTTGCCCTTGGACCAGAAAGAAGAAAATCTGACTCAGGAGTTATGTTGCCAACCCTCAGGGTCTCTCTTATCCAAGACATGAGGCATATTCAAAACATGAGTGAGATCAAGACTGATGTCGGACGAGCTCGAGCATGGATAAGATTGTCTCTAGAAAAGAAGGTCTTGTCCCAGCATCTCAAGCAGTTGCTCTCTAACCAGCTGCTCACAAAGAAGCTTTATAAACGTTATGCTTTTCTCCGTTGTGAAGAAGAAAGAGAGCAGTTTCTTTACCATCTTCTTTCCCTCAATGCTGTGGACTATTTCTGCTTCACCAGTGTCTTCACCACTATCATGATTCCATATAGGTCAGTGATCATTCCCATCAAAAAGCTGAGCAACGCGATCATCACGTCAAACCCTTGGATCTGTGTATCAGGAGAACTAGGAGACACGGGAGTAATGCAGATTCCCAAAAACCTCCTTGAAATGACTTTTGAATGCCAGAATCTGGGGAAGCTGACGACTGTCCAGATCGGTCACGATAACTCAGGACTGTTAGCCAAATGGCTAGTGGATTGTGTCATGGTCAGAAATGAAATCACAGGACATACATATAGGTTCCCATGTGGGCGGTGGCTGGGGAAAGGCATTGATGATGGAAGTCTGGAGAGAATTCTCATTGGAGAATTGATGACATCAGCAGCAGATGAGGATCTAGTAAAGCAGTGTCGGACTCCACCCCAGCAGAAATCACCCACTGTGGCCAGGAGACTGAGCATCACATCACTGACAGGAAAAACTACCAAACCCAATGCAGGACAGATCCAAGAAGGAATTGGAGAAGCTGTGAACAACATTGTGAAACATTTTCACAAACCTGAAAAAGAGAGAGGAAGCCTCACTGTGCTGCTGTGTGGAGAGAGCGGCTTAGTTGCGGCGCTTGAGCAAGTTTTCCACCATGGCTTCAAATCAGCTCGCATCTTTCACAAGAATGTCTTCATCTGGGACTTCATAGAGAGAGCAGTTGCTTATTTTGAAACCACTGACCAGATTCTAGATAATGAAGATGATGTCCTCATTCAGAAATCATCCTGCAAAACCTTCTGCCACTATGTAAATGCTATTAATACTGCACCCCGGAATATTGGGAAGGATGGCAAATTCCAGATCTTAGTTTGCCTTGGAACACGAGATCGCCTGCTCCCACAGTGGATTCCTCTGTTAGCCGAGTGTCCTGCCATCACCCGAATGTATGAGGAGAGCGCCCTCCTGCGAGATCACATGACGGTCAACTCCCTTATCCGCATTCTGCAGACCATCCAGGACTTCACCATAGTCTTAGAAGGCTCGCTCATCAAAGGAGTGGATGTGTAACCCAATTAGCTAGAAACTCAGACCAGAACCCTTGTTCCTGAACCTTCCCCACAACGGGGACGGATTTGGACTTGTCTGACAAGTCAGTGAGTCACTGCAGGGGCGGCACGGCGTGTCCCCCAATGTGAACAGTCCTCACACTGCAGACAAGGCAAAATGCTGTATTGTAGTTCATTTGAACCTGGAATTTAGTATAAAATAGAGTATTTTCATGTGTTAGATGTGTGTAAATATTCTCTCTTCTTTAAGAAATTCTATTACTCTAATAAGATACTTTTCTTAGATTGAATACTCCTGTAACTTAAAATCAGTAGCTTAAAAGTATTGGGAGTTGGGTAGTGGGGAGAGTGGTGCTAGTCAGGAAGAAGCCAGTAAACATGTAAATATAGTACAACCCATTGGGGCTTTTTATTTCCTCCAGGTACCACAAAGGAATCCAGAAAGCATTGTTATGTACTTGCCAGCCATCCTGGTGTCTTACCCTTTATATTGTGAATGTAAACAGTTTACCTGCTGTAGGGGAGAGTAGCCCTCATTTACATCTTTTAAGTTTCAGATGGTTTCATAATTTGAATTGAGCCACTCTTCCAGTCTTGGAAAAATTTTTTCATCAGCACAAGATATAATTCAAATATTTTAAATACTGGACCCCAGGAGCTTGGCTACACTGAAAAGAGAACACACAAAGCCCTGAGAAGTCTGTGAAATTGTGGGATTATATTAACTTCTTTACACTTTGGAAAGATTAGCCTAGACTAACTTCATCCTTGACATTTTTATTCTTGTTATTTGAGGTACTTTGGGGAGATGTGAATTTCAGAGTGTTGGCCTCATAGTCTTAAAAACTGCAAATAGCAGTTTGATTCTATACTTTTAATTTGGCCATCTCAACCCTGCAGTTACCTCTCAAGAATAACCACAAACACTCTTTGTTTGGTTTCAATCACCCGCCTCCCCTCTTCCAGTGCCCATCCCCCCTCAGGAAATGGAAAGAATGTCGAAGGAGGAGGAGGACTCTGTGTGGCTTGGAATGTTTTTGTGAAAGTATTTGTTGACCATGATAATGCAAATACCAGAAGAGAGAAAGAATGAACCCTTTCTGGGTGTTTCAGGGCCAGCTGTATGTTCCTTTGTAAGCAGGGGTGAAAATGTAATACTGCGGGCCCAGGAAGGTAAAAGCCAGTACTGCGCAGACTGGCAAAATGGAAGCCAGACAAGAGGCAACAGTTTGGAAGACCAAACGTTGTGAGAAACTTTGCAATTTGGTGTTTTTTAAGGAAGTTAAATACAGTGTTAGCACGTTACCGTAAGTCTTCATGTTACGGTTGGTCTTGTAAGTAATTTAGACATTTGCACGTTGTTAGCAGTGAAATTGCCTTAGCAGAGCTCCAGGTTTTGTTCCCAGTTGTGACTGAGAAGCAAAGTCATGGCCTCTCAGGACCCTTGTGTCATCTGCGGGTCCTGGGCTTTAGCCAATAGTGTTGCTTCCCTTTTTCTCTTGAGGAAGAAACTAGTGAAATAAGTGCCCCACTCCCGTTATCAAACACTGCATTCAGCCAAGGCACACTCCCTTTTAATATGTGACTGAGTCTTTGAGGAGGTAAGGGAGAACTGAAGGCAGCATTTAGAAACCATGGAAAGGGTTTAAGATGGGTCTGGGTGACCTGGGTAGACCAGAAATTTGTTTGCCTGCAGCTAAAGTTTGCCCACAGTGGTGTGGCTACCCCTGGGACATGGAGAGTCTATTATGGGACATATCCAGAACCTGTTTCACCCAGGTGCTTACTGTTTCAATGATGAGAAACCACAGAATGATCCAATCTAGGGTTTTGTTCTTGTTACCTTTTCCGAAGGCCTTGCTTCTGACACATTCTGGACAAACAGAGAGGTGACTTAGGTTAGCATGCTAGAATTGAGTCGTCTCATCTAGCCTTCTCATTTTACAGATGGGAAGACTTAAGGATCAGAGAGATTAAATACTTACCTGCACACCTGGTCAGTGGCAGCACAGGGTGTAGAATTCATGTTTTTTTAATTATACCAGGCTACATGAGACTGGCCTTCAAGGCATTCATATTAATAATAAGTCTTTCTACCCTTGGATCTTAATTCATCCACCTATATAGGTAGCAGATAATGATTAATATTCATTTATAGTAATAATTTATAGGGATTAATATTCATTTTAACAAATTGACCTTAAGTAATAGAAAATTACACCTGTTGTAAAAAGTAGGAGCAGGAATTCCCTGGCAGTCCAGTGATTAGGATTCCACACTTTTACTGCTGAGGACCTGGGTTTCATCCCTGGTCAGGGAACTAAAATCTCACAAGCCTTATGGCACGGCCAAAAACAAAACTAGGAGCAAAAGTGGATTTCAGACCTGTGAGTAAAACCATTACTTTAGAAAGTAATACCCCCCAAGAGTTTGACCTGAAATTTCATCCCATTTTCTATTATCTGACTACAGTAGTGAAATGACCAATTTCAGAAGAAGAAATCACACCAGAACGGACACATCGTCTAGAATGCTGTGCCCTTTAGTTATCACCGTGGGAGTCTATACACAGTCCAGTCACACAGCCTGTGCTTCACACCCCTCGGACCTCCTTATGAGCTGCCCGAATGCCCTATAGCCCATTCTTTTGAATATTTCTAGTGATGGGTAATGGTGGCTTTTCAGAAGAAATTTTCTATTTGGAAACAAAAAGTTCTTAGAACCCAAGTTGATGAATGAAAAGGATACTTATGCAGAGTTTGGGGTCATGTAAGAGATACAGTAAGACAATTCTTACATGGCTTATAACTGTCTTTGAGTATCAAAGTATTTTGAGCAGGACAGCAGCAAAATTCTTAGAATAAATGTACCTATAAGTGTACACAGCCTTCCGACCTGACTTTGGAAAGTCACTCAGAGGTATACTTTCTGCTGTTAATATATTAGTATATCACTATATCATCATACTTCAAAGTTAAAGTATACAAAAATCAAATTTGACTTTTTTCTTCAAAATAAAAGTTGTGCCTGGAGTCATGATTAGTATTTTCACAAAATAGCTTAAGAAGAAATTATTTTAAAATTAAATTGCCAAAAATGTTACCTCTTGAAATACTTATCTTCCAAGTGTTTTTCAAATGTTCTGAAAGTCCTAACAATCACCTTTTTGATATAGGGCCATTACACCAGTGTTGGTATTATGTGTGAGACCCTGAAGCCCTGTTCTGTTTGGGGGCTCGTCTGCGCCTTAAATGACTGCGGCTCAGTGTGGAGCAGTATAAAGCAGTGTTCTCAGTGGAGAAAATGGGGCTACTGAGAACAGAAGGAAGGCCTCCCGACCTTCCCTTCCTCTTTCCCACTGTGGCAAGAATCTGGTAGAAGAAACCGAAAGCTTGCAAAATTTATGATTTCCCTCTAAATTTTATTTTAAATATTTCATACATTTTGTACCTTTTGTAACCCTGTGGTATTTACTTTAACATGGCTTTTTAAGAAATCATTTTAATGAACTTCTGTCACACTGTATGAATATACAGGGGAAATACTGAATTGCTCATATTTCCTTTTTTGGCAATAAAGCACTGTTATATGTAAATGGGAGTAAAAGAGGGATGGAGACTATACATAACAGTTTGTGTATAGTAAATGCTGACCCCTCAGATACTTTGAAACATGAGGCAACAGACAAGGACCTCAGATTGCCCAGGGAAATATTTATTTGACAGCATTGGGAGTGTAGCTGTTAATTATAAAATAGCTTCTTTCTGCTAAGAATTATGATTTTTCAGTAGATTTTCATTTTGAGAACTGTTGAGTATTTTCTCTGTGAGGTTTATAGAAACTAGTCTATCTTTTTCACCATTTGGAAGGACAATCTGAACCATAGCTATTTATATTTCAGTATTAATACACCTTCATTGATTGAGAATGGAGTCTTGAGATCTTCTCTACTTTTATAAAGTGAATTCTATTTCCACGTCATCCATGTCATTTGAAGTCCGTGTTTCTTATATAAGTACTTGTTATATTACCTTTTAGTGTAAAAGGAGAAACAAATAATAAACTACTAGGTCTCTTATTCCTATTAAAATCCATTTATAAAACTCTTGAATCAAACTGATTTCCAAGCTTTTTGAAGAGGATACCAATGGAGTGTGATCAGAATAATCCAAGGAGAACCTCATCCTTTCAGATCTTAGCAGCCCTGATGTCCTCTCAAGGACAAAATAAAGATTGGATCCAGAAAGGTATCACACTGAGCAATTAATATCAGAGTGAAAAAAAATCATCAAAAACATTCTCCTCATTTGAATGAATCCAGGGTATCCTTGGGTTATGTGGGAGGGAATTACGCTTGACACATTTACCTAAATGTATTTGTGTGTGGCCCAGTCTTTATTCCAAACACCAGACAGATCTTGTTAACAGTAGAGAGGTATGGTGAGAGTTCCTGTTGTCAATCAAATGAGGGTGTTAAACATATAGAAAGAATTCTCTGTGTTACACTTGAACCATGTATAAATGTATCCTGTGTGTCTTTTTTTTAAATAAGCATTTCTGCATTTAAATTATATATTTTTTTCTTTGTATTGTTAACAAAATGCATCAGAACTGGATTTTTTTTTCATCTGAACATAATTAAAATTTAAAAAGTATTGTGATATCAAGCACTTTAACATATGTATCAGAGAAACTGATGTGGGTTTTTCAGGTTTTGGAGTACATTTAAATATGACTTTTCATGCTTTGTTCTTTACAAATAAAACTGTGGGGTTGATACTTTGTTTTGCTTCATTATTGTAGAACCTTAATACTGAGTAGTGCACAGGGCCAGTGACTCCAGAAAGTAGAGCAATAAAGCCATTATGAGAGAAAGCTACATGAAACCATTATGTGGTAGAAATATGAGCTTCCCAGATGGCACAGTGGTAAAGAATCCATCTGCCAGTGCAAGAGGCACAAGTGTAGATGTGGGTTCAATCCCTGGGTCGGGAAGATCTCCTGAAGTAGGAAATGGCAACCTGCTCTAGGATTCTTGCCTGAAGAATTCCACAGAGTGCGTACACACATGCATTCAGGCGCGCGTGCACA EMBV3_31056 AGTCTCAGTCTCCACCTTCCTCCCCGAACATTCCACGTAGCTGTAGTGTCCCATCTGTTT Gene GeneID:286863|YWHAB:NM_174794:773_cdna Constitutive 0 NULL GeneID:286863 13 GENE YWHAB NULL tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide EMBV3_37679 TCCCTGGTCAGTCTCTGCTTTGCTGATGGTCCTGCTCTCTGGAGTAATAGCTTTCATGGT Gene GeneID:509009|SLC35E3:NM_001083654:28_cdna UTR3_Alt 2 NULL GeneID:509009 5 GENE SLC35E3 MGC151827 solute carrier family 35, member E3 EMBV3_41816 CAGATGGCAGGATTATCTACACAGAAAGTCATAAATATTTCATTGAGAAGTTTTAGAACT Gene BVV0102_006115 + 0 NULL GK000001.2:116990799-117006048 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13147 TGGAACTCTCCTGCTATAATGATGGATCAGCTTCTGGGATGCAGGGGAGCCCAACAACCT Variant GeneID:514797|CLEC4E:XM_002687823:128_cdna 432^699 2 EMBV3_01474 GeneID:514797 5 GENE CLEC4E NULL C-type lectin domain family 4, member E EMBV3_03506 CTTCTGGATATTTCTTGATACCTCTCCTGTCCCCGCACCTTGTTAGCTGAGACCCAGTAG Gene GeneID:505328|OSBPL2:NM_001035020:868_cdna Constitutive 0 NULL GeneID:505328 13 GENE OSBPL2 MGC128264 oxysterol binding protein-like 2 EMBV3_24667 TTCCCCATCAGGGCCGAGGTTTCAGTCAGTATGGTGTCAGTGGCTCACCAACGAAATCTA Gene GeneID:512321|MIOS:XM_002686670:59_cdna Constitutive 0 NULL GeneID:512321 4 GENE MIOS NULL missing oocyte, meiosis regulator, homolog (Drosophila) EMBV3_28643 GCACACTCACATGCACCACACATTAAATGTAAAACCCCAGCATATGACTGAGACAGAGGA Gene BVT0102_236755 - 1 EMBV3_13903 GK000010.2:50283149-50628366 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34678 TTGTGCCAAAACCCGCTGTGCTCACAAGGAGAACTCTCAGGCACGTTTAAGAAGCTGACA Gene GeneID:281985|PLCB4:NM_001166510:2_cdna Constitutive 1 NULL GeneID:281985 13 GENE PLCB4 NULL phospholipase C, beta 4 EMBV3_09252 TGCCGCCGCAGGCCCGAGCCCCACCTCCAAAGGAGCCACCTGGCCCAGGGCCAGACATGA Variant GeneID:617968|C25H7ORF47:NM_001102315:326_cdna 794^905 3 EMBV3_03446 GeneID:617968 25 GENE C25H7ORF47 MGC148922 chromosome 7 open reading frame 47 ortholog EMBV3_13777 TGCTGTGAATACATGGTGGGCTCCAGGAAGTTCTTTGTCCTCTCGCTAGAGCAGGAGACA Gene GeneID:527922|INMT:XM_002686845:58_cdna Constitutive 0 NULL GeneID:527922 4 GENE INMT NULL indolethylamine N-methyltransferase EMBV3_24790 TCAAGTTTTAGTTGTGGCATGTGGGATCAGTTCCCCAATCAGGGATCAAACCTGGGTGCC Gene BVV0101_046718 + 0 NULL GK000011.2:46153826-46211169 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027771 1 XLOC_015331 NonCoding TCONS_00027771 XLOC_015331 NonCoding NonCoding - 11:46196013-46196645 - TSS19619 535 1 TCONS_00027771_1 60 0.22803738317757 2 0.155309033280507 0 0 0 0 0 0 0 0 0 0 4.27885769851333e-06 0 0 0 0 0 0 0 0 0 0 0.000194185676955122 0 0.000689387255252249 0 0 0 3.59071857022026e-05 3.62961042098543e-05 0 XM_005196866.1 CCDC78 PREDICTED: Bos taurus coiled-coil domain containing 78 (CCDC78), 1e-21 107 84.47 0.186915887850467 0 noncoding 0 0 0 0 -0.468551152100305 0.144798191574084 -0.146366988761082 0.131361099860647 CTTTCACTTTCATCCAACAAGAATAATTTCTTTGGCTGTATCAAGTTTTAGTTGTGGCATGTGGGATCAGTTCCCCAATCAGGGATCAAACCTGGGTGCCTTGCATTGGGAATGCGGAGCCTTAGCCACTGGACCATGAGGAAGTCCCTGTACAAAAACATTTCTTACTGAGGGTTGTGGTTTTAAAAGCTGAAGAAACCATTGCTTTAAGGGAAAGCAACCATTTATCAACTATTAAACAAAGACTATCAAAAATTGAATCTTGTTCTAAGTAGAGAAAAAAAGCAAGACTTGGCTCTTGTAATTAAGCTCTGAATTGGGGGATGAAAAGACAAACAAACCAGTAGGACAGGATGAGAAAAACCACAGTGACAGAAGGGTGTGCCCAGGGGAGGCAGGCCACGGCCTTGCCAGGGTCCTGGTGCTCCCAACTGGGGGTGGGGTGTGTGAATACAGACCAGCAGGGGCTGGTGTGGCCGCCCAGAGCCAGGGGCTGCTCGCTGGGAGGTGGGGAGGGAAGCAGGGTCAGTGCGGC TCONS_00024899 r 5' 21240 TCONS_00024899 r 5' 21121 EMBV3_07909 GGTGCCAACTGGAGTCTTGGTAACAAATGGGATTGCACAAATCCACGGTATTTAGCTGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06822 GGAGAGGGCCACCCAGGAACATTGAAACAAGAGCAAGAATCCCAGAGGCAAGCCTTCCAT Gene BVV0102_102944 + 0 NULL GK000002.2:120146293-120227916 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103532 TCONS_00103531 1 XLOC_062143 Coding TCONS_00103531 XLOC_062143 NonCoding Coding - 2:120212688-120215192 - TSS76866 1049 2 TCONS_00103531_2 74 3 0.582101478226129 0.000573410085163738 2.28492028346684e-05 0.000213929029145195 5.42638455165139e-11 4.43670487367271e-10 1.36387666857533e-05 1.35047225418442e-10 2.46914276579167e-16 4.1733387371446e-48 0 1.51611330809459e-20 0 0 6.47639918055975e-18 0 0 0 0 2.95085088578173e-51 1.92224224774023e-26 2.49867785936709e-22 0 0 0 6.30394356159695e-05 0 5.68969429262343e-06 0 1.24571687859172e-10 0 XR_230424.1 LOC101905734 PREDICTED: Bos taurus uncharacterized LOC101905734 (LOC101905734), 0.0 654 100.00 0.344137273593899 0 noncoding 0 0 0 0 0.0366599376729146 0.723768914538798 -0.0410463371096108 0.540616748512286 CACCCGGAAAGAGGCCGCCGCGCCGGGGAAGCACCCAGCCACAGAGTCCTCCAGGTGCCGATCCTGCGCTTTCGTCTTGGTCCCGGAGATGACCGAGTCCAGCACACGGACCGCCACGACCACAGGGAGGGAGAGCCAGCTCATCATCGCCCACTGCCGGTCAGGCAGAACCATGCGGCCCCCAGGGCCCCCGCAAGCCCACTGCCTCACAGGCCTGCAGCCCTGCCCCCTACCCCCTTGTCTCCCTGAAAGTTTGTTAAGTGTTCTCCCCTGGGAGAGGGCCACCCAGGAACATTGAAACAAGAGCAAGAATCCCAGAGGCAAGCCTTCCATCCTTCCCTTTTGCCAGTGTCCAGCTCTTCTGGCCCCAAGGAGCCTCCAGTGAGGACTTTGATTCCTAAAGAACAGAAGCCTGGGGGCCTCCCTCTCCTCTCACCCTGAAACCTGGAATCCTGGAGCTGTGCTAGGCAGAGATTATATACAACGGAGTCATTTAAGACCTGCCTCTGCTGCTAAGTTCTGGGCCTTGGGTGGATGTGAGGATACACAACTCGGTGGAGACCTGGTGTGGGGCCTGGCGCACAGTGAGTGGAAGCTGGCTCCTGACCCTGTGGTGATTCCTGGGTGCTGACCCCTTTCCTGACTGAGCCCCTGGACAAGCTGCCGATTGGAGAGCGTCCACATTTCATGGCCAGAGACCTGAATTCCGGGGCCAGCCGGTTGTCCAGGAGCTGGATGATCACTCCTTTGAGCCAGCCGTTCCCCGTGGTCATGCGGGGCTTGCCGTCCCCCAGGCTGGCTCTGAGGATTAGACGCATTTTATCTTGTGCAGGGAACACAGGGCATCGAGATACCACCCAAAGACAGCCACCGCGGACTCACTCCAAGTGTTCTTCCTGGGGGGCTCCCTAGCACATATGTGGGCAATTTCCCCTGTATTGTTCTATAATCCTTGATGGTTGCTCTATAATTGCTCTCAAATGGTTTAATCATAATAAATAGCATCTGCAGAGCAGTTTACAAACTCTAACTCTTCCTGCACCCCCCCC TCONS_00103539 TCONS_00103540 TCONS_00103541 s 5' 10183 TCONS_00103539 TCONS_00103540 TCONS_00103541 s 5' 12686 EMBV3_33387 AGAAGAAAAAGCTGTGCTTCAAAGAGAACGTTCAACAGACTCTTCTGGAGAAATAAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11757 GCTCCTTGAGGGCAGGGACCATACCTTATTTACTGTTAGAATCCCTTGCATCTAGTGTGG Gene BVV0102_039116 + 0 NULL GK000005.2:65609019-65614888 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195356 TCONS_00195364 TCONS_00195355 TCONS_00195357 TCONS_00195365 TCONS_00195358 TCONS_00195361 TCONS_00195362 TCONS_00195359 TCONS_00195363 TCONS_00195360 1 XLOC_118028 Coding TCONS_00195358 XLOC_118028 Coding Coding ARL1 5:65612144-65623747 j TSS145598 3628 1 TCONS_00195358_1 164 0.123759647188534 6 0.687812446129978 1.55116344505095e-17 0.000491108782131827 2.26178797639021e-13 5.05387063163225e-06 0.000905645061658231 1.56148517001945e-50 0.000643904327939489 0.000205108273243645 0.00165171305110125 9.7530670794993e-11 6.75957675154539e-05 1.16022365971786e-07 5.93054471902631e-05 0.000262197319882713 4.1861198482849e-09 0.00232227705013645 2.89673174485043e-09 5.73457257347988e-07 0.000567727430832892 0.00014978313753184 4.86940817410307e-05 2.33085793661849e-07 0.002118807608901 0.00214901393340359 7.48122376713322e-19 5.24006393884736e-09 2.74927554796378e-17 4.13345943395722e-05 1.08729109722136e-09 0.000450151506904842 XM_005206584.1 ARL1 PREDICTED: Bos taurus ADP-ribosylation factor-like 1 (ARL1), 0.0 5119 100.00 0.781973539140022 NM_001177.4 ARL1 Homo sapiens ADP-ribosylation factor-like 1 (ARL1), mRNA. 0.0 1552 80.32 0.470782800441014 TCONS_00195358_1 sp|Q2YDM1|ARL1_BOVIN ARL1_BOVIN ADP-ribosylation factor-like protein 1; 5e-119 338 100.00 0.99390243902439 6 coding 1 1 1 1 0.741557899723642 0.0293031523231425 -0.00296823903494693 0.951820726508723 GTCAGTTTAAAATCCAAAAGGTGGCTTTTTCTCAAGCATTTTTTCCAGTCTGTTTGGAACTCGGGAAATGAGGATTTTAATTTTGGGATTAGATGGAGCAGGAAAAACTACAATTTTGTACAGATTACAGGTTGGAGAAGTCGTGACTACTATTCCTACCATTGGATTTAATGTTGAGACAGTAACATACAAGAACCTTAAATTCCAAGTCTGGGATTTGGGAGGACAGACAAGCATCAGGCCATACTGGAGATGTTATTATTCAAACACAGATGCAGTCATTTATGTAGTAGACAGTTGTGACCGAGACCGAATTGGCATTTCCAAATCAGAATTAGTTGCCATGTTAGAGGAAGAAGAGCTGAGAAAAGCCATTTTAGTGGTGTTTGCAAATAAGCAGGACATGGAACAGGCAATGACTCCCTCAGAAATGGCAAATTCACTTGGGTTACCTGCCTTGAAGGACCGAAAATGGCAAATATTCAAAACTTCAGCAACCAAAGGCACTGGCCTTGATGAGGCAATGGAATGGTTAGTTGAAACATTAAAGAGCAGACAGTAATTCAGTCACTTTTGCTCCTCTGAAACGAAGACCACATCACATATCCCTTTGGAAACAGTTAAGTGTGCTCCACACTACTAAATGTTAAAGCTGTCTGATTGTCGGCATATACCGAACTGACTGGAACATTTGTAATACGTATTAAAACTAAGTGGTTGGTTGGAAGGGTAACTCATTGTGATTGAACCAACTGAATGTCTGCCCTATATAATGTAAAATATTCCCTCCTTGTTATCTTGTGTTACGGTATATATTCTATTTGTATGCAGTTCTTATTCAGATACAGTCCTATTAAAGAATGTACTCTTAATGAGGAAAAAAACCCTCCGATTTTTAAATTAGTGGTTGCATCTTGTTTGTATTAACACTAATGAATATCTTAACTCAGATTTTTCCCTCTAAAATGAATTAGGTTTTTCCAAAGATTAGGCTCAACAGAGTAGGCCAAGAACCTAGCGTGGGTAATTATAGTCTTCATTTGCTTAATGACCACTTTATGTAAGCTGTTTCATTTAAAAGCTTTTGGTTATAGGCATGAAATAATTATTTTGGTGGCTAACTTCACTGACTTATCTGTAATTATTATTTTATACTATTTATAGTTGTTTGGAAATTTTTTTCAGATTTGGACCTACTCAGTCAATTGGTACAGGAATCCTGCCATGTAGCTAGGACATCATTTTTACATCTTCATTTTTATGGACATGGACTCAAAATGCTGATAGACTGGCTTGACTAAAGTCATCTGCAAGGGAATCTTACAGTGAGATTTCAGGGTCAGACAGAAGCTTGTCCCATGAACTATAAATTCCTGGAAGTGCCAACATTGACAATACAACTTAATTCCTTATGTAAAATTAAGCTAATAGAAGTAGACATGGTACATTCAAAATAATGTCTGTAAATTTTTCCATACTAGTAGAGGTAGTAGAAATAGTCCTAGATGGTTATATTTGATTGAATTCACAACACATTAAACAAAATTTCATATTAAAGGAAATTTTTTGAAAACAAGACTTATTTTAAGAAGCATTGTAAAGGATGTTTTTTACTGCCTTTGGTTCTATCTGCCTGTAATTGAACATGTGACTTTGGTGAAAAGTCAAAATCTTATTTGATTCTAGAGGGAGAAAGTATTCCTGATTTTAAAAATTAGACTTACTGCTGCTAGACTACCAAAAACAATTATTTCCTAATGGACTTTTAAAAGGAACTTTACAAACAACCCAGTCTACAGTGAGACAGAAATGGAGACCTTAGTAATTACTAAAATTGGGAGCAATTTTTTTCAGGCCTTCTTCCAGGAGCATGTGTTCCCAGTGTACCGCAAAGTACTAACAGTATATAACTGACATCGTGTCATAGTTTGCAAGGCACTCCGGATGGGCAAACTGTCTTATTCATATACCTAATGTCCAGTATGGTGCCTGGCACATTATGGCACCTCAAAATATGTTCATGGTTAAAAATGGTAGGCTGTATGTTTGTCAGCTAGGAAAACAGTACATCAGCACTTTATACTTGGGTCCCTTTCTGGTCAGTGGCACATATCTCGTGTTAGACTTGTACCTAAATGGATAAGCACTCCCCAGTGGTTCACGAACACTGTGAAAACAGAAGTATGGGGAGGTGCAACCCTGGCAGGCAAATGCTGCCTGACAAATACCCTTGGTAGCAAAGGCCTGCACTTGGATGATCCTGATCCCTCTGGTTTGTCACGAAGAATAGGATGGGATAAATAGAGCATACATTGACATTAACCTGGTATAAATGAGAAGGTCCTTGTCTAGCAGCAAACAGCTGTACAAGTATGTTACAGGAGGTTGAATGTTTATATTTATAAAAATCTACTGAGTCTTGTTTCATGAGAAGCCTGAAAAGGACCAAACTTGAAATCAGAGCATATGAGTTCTAGGTGCAAAGGGCCACTCCATCAGTTTCTGTTTGGTTTTTCTTTTTGTACAGATAATATCAAAGGTTTCTTTTAGCGCTAACATTCTATTTTATAATTCTGTTTGGTAGTTGTGCTGTGTCATGTGATCAAATTTAAAAAGAGAAATTGAGAGTGGAATTCTATTATCAGAATACCTGAGATGCACTTTAAATTGTGGAAATGTAAGCTCCTTGAGGGCAGGGACCATACCTTATTTACTGTTAGAATCCCTTGCATCTAGTGTGGTGCACCTGGCTGGTACATACTTGGTACTGGGCTCTCAATAAATATTTACTGGAATAAATATTGATTAAATACTGATTAAAATGATTAAATATTAAAACAAAGCCGTGCTCAATATACTGGAGATATTTATTTTTCCTGACTTTGCCTTTAGTATTAATAACTTTTGATTTATAAATTTTTTATAAAAGCAAATACCTGCACTTTAAATCACTTAGAATTAGGTCTGCTTTCCAGGATGCCCCATGTTTATTGTTTTGGGATATTACAAACACCTTGCAAGTGTGAGAACTCCTGTTTGAGATACAAACTACATCACAACACAAATTGTGAAGTTCATGAATGTTTGAACATTTGATTCCTATGCCATATGCTGTAATATTCTAACCCTGTCACCATAAACAGCATGGGCTTTCAAGTCCTAGGTTTAATCTTGACTCTGCCACATTCAACCTGTGTCACCTTTAGCTAGATTATTTAACCTGAGATGAGATTCCTTATCTGTAAAATAATGAGTTTTAGGAAGCTGTCAGAAAGACTTAAATAAATGAGTTAAATAAAATGTAAAGTGTATGATGATTTTTCCTCCCCCTACCCTTCCAGATGTATTGGATACTAAAGAATATTGCTTCTGTTTAGTACATCAAGTGTAGAGAGGCAAAAGATACCACATGGTTGAACAACATGCCAGACTGTTTTCCATAGTATTTTAGAAAAAAAGGTTCCCTTTCTTCCACCACGCTTGCCAACATTTGGTATTGTCAGCCTTGTTAAATCTGAAGGGTTCAAAATGGAGTTTCATTCACATGTTAATCTGAAAGGTTCAAAATGGAGTTTCATTCACATGTTAATCTGCATTTCCCCAATTATTAACAAGGTTAATACAGGAG EMBV3_04193 AAGACTATGGCATTTTCCCTGTGGGCCTGGTGTCTGCTGCCCAGTGCGATTTCCTTCTTT Gene BVV0102_036446 + 0 NULL GK000030.2:40071021-40075753 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246842 TCONS_00246845 TCONS_00246848 TCONS_00246841 TCONS_00246847 TCONS_00246846 TCONS_00246843 TCONS_00246840 TCONS_00246844 1 XLOC_151135 Coding TCONS_00246842 XLOC_151135 Coding Coding HCFC1 X:40074359-40096051 j TSS184981 7256 1 TCONS_00246842_9 1694 27 0.666728136093311 0.000341272318403511 8.46059586995459e-15 2.96330018386719e-06 0.00021425643789447 0.00174566524645521 4.11521054288136e-30 0.00141153397361646 0.00125121900638029 0.000654680201916554 2.34438708549984e-05 0.00117764396843495 0.000699395711588197 0.00034152725765002 3.39134970313606e-103 9.11673243700498e-06 0.00027430433392819 0.000316401414451652 0.00219101566749795 0.00158716104896942 0.00387787935260268 1.25375463534277e-107 0.000346193554051346 1.26803524495141e-14 0.000298055246905152 0.0059789393346778 0.00380751711196759 0.00172183308374694 6.43837623124745e-05 0.000259777590263591 0.000531159323223621 XM_002707908.2 HCFC1 PREDICTED: Bos taurus host cell factor C1 (VP16-accessory protein) (HCFC1), mRNA. 0.0 6607 99.76 0.507855567805954 XM_005274664.1 HCFC1 PREDICTED: Homo sapiens host cell factor C1 (VP16-accessory protein) (HCFC1), transcript variant X1, mRNA. 0.0 4938 89.70 0.508544652701213 TCONS_00246842_9 sp|Q61191|HCFC1_MOUSE HCFC1_MOUSE Host cell factor 1; 0.0 1764 96.87 0.602125147579693 7 coding 1 0 1 1 0.0296864590410811 0.781714481602789 -0.00412612348089064 0.941473014335018 GGGGCTCCGCCATTTCCGGCAGGGGAGGGCTACGACTGAGGAAGGGAGGAGAGAGAGGCGGCTCAAGATGGCGGCTCCCAGGGCCTCCCGCTCGAGCTTGTAAGTGGGAGCTCCCAGGCAAGTAGTCAGGGCGGCGGGACTCGACGGCCTCCAGCTTCTCGGGTCCAGGCGCTTGACAGTTTCAAGAGGCTCTTGACAAGACGCGGTAAGCGAGAAGAAGGGGAAGAGGAGAAGGGAAGGAGAAAATAGTTAAGATGGCGGCCTCCATGGAGCCGTCCACCGCTGTGTGAGGAACAGTTTCTCAGTGAGAGCCACCTTGGACGAAAAGGGGTGTGTGTGAGTGGAATTGGGGGGCTCCCTTCCCACTTGGCGACTCTTCTCCACCGCACCCTTTCCCGGAACTATGGCTTCGGCCGTGTCACCCGCCAACTCGCCAGCGGTGCTCTTGCAGCCCCGCTGAAAGGGAGTGGTGGGCTGGTCGGGTCCAGTGCCCCGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGTGGTGTTTGGCGGCGGCAACGAGGGGATAGTGGACGAGCTGCACGTGTACAACACGGCGACCAACCAGTGGTTCATCCCAGCTGTGAGAGGGGACATCCCTCCTGGGTGTGCAGCCTATGGCTTCGTGTGCGATGGGACACGCCTGCTCGTGTTTGGAGGGATGGTGGAATACGGGAAGTACAGCAACGACCTCTACGAGCTCCAGGCAAGCCGGTGGGAATGGAAGAGACTGAAAGCAAAGACGCCCAAAAATGGGCCACCTCCGTGTCCTCGGCTTGGGCACAGCTTCTCCCTTGTGGGCAACAAGTGTTACCTGTTTGGGGGTCTGGCCAATGATAGCGAGGACCCCAAGAATAACATTCCGAGGTACCTGAATGACTTATACATCCTGGAACTGCGGCCGGGCTCTGGAGTGGTAGCCTGGGACATTCCCATCACTTACGGCGTCCTGCCCCCACCCCGAGAGTCTCACACTGCAGTGGTCTACACTGAGAAAGACAACAAGAAGTCCAAACTGGTGATCTATGGAGGGATGAGTGGCTGCAGGCTGGGGGACCTCTGGACCTTGGATATCGAGACTTTGACATGGAATAAGCCCAGCCTCAGCGGGGTGGCACCTCTTCCTCGAAGTCTCCACTCGGCCACGACCATAGGAAACAAAATGTACGTGTTTGGTGGCTGGGTGCCTCTCGTCATGGATGACGTCAAAGTGGCCACACACGAGAAGGAGTGGAAGTGTACCAACACTCTGGCTTGTCTCAACCTGGATACCATGGCTTGGGAGACCATCCTGATGGATACGCTGGAAGACAATATTCCCCGGGCCCGTGCTGGCCACTGTGCGGTAGCCATCAATACCCGCCTTTACATTTGGAGTGGGCGTGACGGCTACCGAAAGGCCTGGAATAACCAGGTCTGCTGCAAGGACCTCTGGTACCTGGAAACGGAGAAGCCGCCACCTCCAGCCCGGGTACAGCTGGTGCGAGCCAACACTAACTCCCTGGAGGTGAGCTGGGGGGCCGTGGCAACAGCCGACAGTTACCTTCTGCAGCTCCAGAAATATGACATTCCTGCCACGGCTGCCACTGCCACCTCCCCCACACCCAATCCAGTCCCGTCTGTGCCTGCCAATCCTCCCAAGAGCCCTGCCCCAGCAGCAGCCGCACCTGCCGTGCAGCCGCTGACCCAAGTAGGCATCACGCTCCTGCCCCAGGCTGCTGCCGCGCCCCCGACCACCACCACCATCCAGGTCTTGCCGACGGTGCCTGGCAGCTCAATCTCCGTGCCCGCCGCAGCCAGGACTCAAGGTGTCCCGGCTGTGCTGAAAGTGACTGGTCCTCAGGCTACCACGGGAACCCCGTTGGTCACCATGCGACCTGCCAGCCAGGCTGGGAAAGCCCCCGTGACTGTGACCTCCCTTCCCGCAGGCGTGCGGATGGTTGTGCCTACACAGAGCGCCCAGGGGACAGTCATTGGCAGCAGCCCGCAGATGAGTGGCATGGCTGCATTGGCAGCCGCGGCTGCTGCCACCCAGAAGATCCCTCCTTCCTCGGCACCCACGGTCCTGAGTGTCCCGGCTGGCACCACTATCGTCAAAACCGTGGCCGTGACGCCGGGCACCACCACGCTCCCAGCCACTGTGAAGGTGGCCTCCTCGCCAGTCATGGTGAGCAACCCAGCCACTCGCATGCTGAAGACTGCAGCTGCCCAGGTGGGGACTTCCGTCTCTTCTGCCGCCAACACATCTACCCGTCCCATCATCACCGTACACAAGTCCGGAACCGTGACAGTGGCCCAGCAAGCCCAGGTGGTGACCACAGTGGTGGGTGGGGTTACCAAGACCATCACCCTGGTGAAGAGCCCCATCTCGGTCCCAGGAGGCAGTGCTCTGATTTCCAATCTGGGCAAAGTAATGTCAGTGGTCCAGACCAAACCGGTTCAGACTTCGGCAGTCACAGGCCAGGCATCTACAGGCCCGGTGACTCAGATCATCCAGACCAAAGGACCCTTGCCAGCCGGGACCATCCTGAAGCTGGTGACGTCTGCAGATGGCAAGCCCACTACCATCATCACAACCACACAGGCCAGCGGGGCAGGGACTAAGCCTACCATCCTGGGCATCAGCAGTGTGTCCCCCAGCACCACCAAGCCCGGCACCACCACTATCATTAAGACCATCCCCATGTCGGCCATCATCACACAGGCGGGCGCCACGGGCGTGACTAGCAGTGCCGGCATCAAGTCACCCATCACCATTATCACCACCAAGGTGATGACTTCCGGAACTGGAGCCCCCGCCAAAATCATCACGGCTGTTCCCAAAATCGCTACGGGTCACGGGCAGCAAGGAGTGACCCAGGTGGTGCTGAAGGGCGCACCTGGCCAGCCAGGCACCATCCTCCGCACCGTGCCTATGGGGGGCGTCCGCCTGGTCACCCCTGTTACCGTCTCTGCTGTCAAGCCTGCTGTCACCACACTGGTTGTCAAGGGCACCACAGGCGTCACGACCCTGGGCACGGTGACAGGCACCGTCTCCACCAGCCTGGCCGGAGCCGGGGGCCATAGCACCAGCGCCTCACTGGCCACACCCATCACCACGTTGGGCACCATCGCCACCCTCTCAAGCCAGGTGATCAACCCCACTGCCATCACTGTGTCTGCGGCGCAGACGACGCTGACAGCGGCCGCTGGGCTTACCACACCCACCATAACCATGCAGCCTGTCTCCCAGCCTACCCAGGTGACTCTGATAACGGCCCCCAGCGGGGTGGAGGCCCAGCCTGTGCACGACCTCCCAGTGTCCATTCTGGCCTCCCCTACTACAGAACAGCCCACGGCCACGGTCACCATCGCTGATTCGGGCCAGGGTGATGTGCAGCCCGGCACCGTGACCCTGGTGTGCTCCAACCCGCCGTGCGAAACCCACGAGACGGGCACCACCAATACAGCCACCACCACCGTCGTCGCTAATCTGGGGGGGCACCCCCAGCCCACCCAAGTGCAGTTTGTCTGCGACAGACAGGAGGCCACTGCTGCTCTCGTGACCTCCACGGTGGGCCAGCCGAATGGCAGTGTAGTTCGTGTCTGCTCCAACCCCCCGTGTGAGACCCACGAGACGGGCACCACCCACACACCCACCACGGCCACATCCGGAGGGGCTGCAGGCCAGCCAGAGGGCGGGCAGCAGCCTCCTGCCAGCCGGCCCTGTGAGACGCACCAGACCGCTTCCACTGGCACGACCATGTCCGTCAGCTTGGGCGCCCTGCTCCCGGATGCCGCCCCCTCCCACAGGACCCTGGAGTCCAGCCTGGAGGTGGCAGTGCCACCCGCAGTCGCCCCTCAGGCCGGTGCTTCGTTGCTCACTCCTTTCCCGACGCAAAGGGTGTGCTCCAACCCACCCTGTGAGACGCATGAGACAGGCACTACGCACACGGCCACCACTGTCACCTCCAACATGAGTTCCAACCAAGACCCCCCACCGCCTGCCGGCGACCAGGGAGAGGTGGAGAGCACCCAGGGCGACAGTGTGAATATCGCCAGTTCCAGTCCCATCACGACAACAGTGTCCTCCACGCTGACGCGGGCCGTGACCACCGTGACACAGTCCACGCCAGTCCCAGGCCCTTCGGTGCCGCCCCCAGAGGAGCTCCAGGCCTCTCCAGGGCCACGCCAGCAGCTTCCACCACGGCAGCTCCTGCAGCCTGCCTCCGCGCCCTTGGTGGGGGACTCCGCCGAGGTCCTGTCAGCCTCCCAGAGCCCTGAGCTCCAGGCCGCCGTGGATCTGAGCAGTACAGGGGACCCGTCTTCAGGCCAGGAGCCTGCCAGCTCGGCTGTGGTGGCCACCGTGGTGGTCCAGCCACCGCCGCCCACCCAGTCCGAAGTAGACCAGTTGTCCCTCCCCCAAGAGCTGATGGCCGAAGCCCAGGCGGGCACCACCACCCTCATGGTGACAGGGCTCACCCCAGAGGAGCTGGCAGTGACTGCTGCTGCTGAAGCGGCCGCGCAGGCTGCAGCCACAGAGGAGGCCCAGGCCCTGGCCATACAGGCCGTGCTCCAGGCCGCACAGCAGGCTGTCATGGGCACCGGGGAGCCCATGGATACTTCAGAGGCGGCCGCAGCGGTGACACAGGCAGAGTTGAGCCACCTGTCGGCCGAGGGCCAGGAAGGCCAGGCGACCACTATCCCCATCGTGCTGACACAGCAGGAGCTGGCTGCCCTGGTCCAGCAGCAGCAGCTCCAGGAAGCACAGGCCCAGCAGCAGCAGCACCACCTGCCCACGGAAGCACTGGCCCCGGCTGACAGCCTCAATGACCCGACCATCGAGAGCAACTGCCTCAATGAGCTGGCCGGGGCTGTGCCCAGCACCGTGAGCCTGCTGCCCCCCACGGCCACTGAGAGCCTGGCCCCGTCCAACACATTTGTGGCCCCCCAGCCGGTCGTTGTGGCCAGCCCCGCGAAGCTGCAGGCCGCAGCCACCCTGACGGAAGTGGCCAATGGCATTGAGTCCCTGGGTGTGAAGCCAGACCTGCCACCGCCACCTAGCAAAGCCCCTGTAAAGAAGGAGAACCAGTGGTTTGACGTGGGGGTCATTAAGGGTACCAATGTGATGGTGACACACTATTTCCTGCCACCCGAAGATGCTGTCCCGACTGATGATGACTCGGGCACCGTGCCCGACTACAACCAGCTAAAGAAGCAGGAGCTGCAGCCAGGCACTGCCTATAAGTTCCGCGTCGCCGGGATCAATGCCTGCGGCCGGGGGCCCTTCAGTGAGATCTCAGCCTTTAAAACGTGTCTGCCTGGCTTCCCAGGGGCCCCGTGTGCCATTAAAATCAGCAAAAGTCCAGACGGTGCTCACCTCACCTGGGAGCCACCCTCTGTGACCTCCGGCAAGATCATCGAGTACTCAGTGTACCTGGCCATCCAGAGCGCGCAGGCCGGTGGTGAGACCAAGAGCTCGACCCCGGCGCAGCTGGCCTTCATGCGGGTGTACTGCGGGCCCAGCCCCTCCTGCCTCGTGCAGTCCTCCAGCCTCTCCAACGCCCACATCGACTACACCACCAAGCCCGCCATCATCTTCCGCATTGCTGCCCGCAATGAGAAGGGCTACGGCCCAGCCACCCAAGTCAGGTGGTTGCAAGAAACCAGTAAAGACAGCTCTGGCGCCAAGCCGGCCAGCAAGCGGCCCATGTCGTCTCCAGAAATGAAATCCGCGCCAAAGAAATCGAAGGCAGACGGTCAGTGAGAGGCAGCTGCCCGGCGCCTGGCTTCTTCTCCAGCCTCCCCTCTGCTTCAGGACCGCCGCCCGCCCGCCCCGCCCCGCCCCGCCCCGCCCACCCCACCCGCCTGGAGCGAAAGAACCTCACGAGCCAGCAGCTGCCCTCCTCTCCCCTTTCTCTCTCTGTTTTTACAAGAATCTTGAGAAAGCACATTTTACAATGGCTGTGAGGAGGGGGGCGGTGGGGGAGCGGAAGGCAGATGCTAAAGAGCGAGTGAGGGAGCGGGCGCCCCCCCTTCCTCCAGGGAGCCCTCAAGCGAGAGACCTAAATGCACGGGAGCAGATGGAAAGCCCACCTCCTCCAAAGTCTGCACACCTCTCGCTGTTGCCCTTGGCTCCAGGGATCAGCCAAGGCCCGAGGAGTTGAGGGGGGTAGCTTGTAGAAGCACCTCCGGCCCCCTTCCCTGCCTCTAGTCTCAGAGGCTTGGGGGGCACCCCCCCCCCACTCCGAACCGGGTATCTGTCTGGTTCTATTTTCTTTTGTGACCTTAGCATTTCTTGCCACGTGACGCCCGCCTGCCCTTTTGGTTTATCCAACCCTGCCCTGCCTGGCAGTCCCATGGGAAGCTGACACGTTTTCTCAGAGGCCTTCGTTCTCCCATCCCGTTCTCCCTCCCCTCCTCTTACCATTCAGAGAAGAAAAAGTGAGGGGCGGAGAAGGAGCCCCGTGGTGGCCTGAGCAGTGTTCTATGAAAACCTCCCAACGCCCACCTGGGGCCTCGAGGAGCCCTCCCACCAAGCCCGGCTTCGACCTCTCTGGGGTCGGGGTTAGGGGCCACATCACCAACTGCTGCATTTGTTGTATTTTTTTTAAGTTGAAATGGATGAAGTTAACAGTTTTATTGTAATTTTAGTCTTAGCGTGTGGGGTTTTGTCCCTTTTTTTGTTGTTATTAGTTGTGTACAGAATGTGGATCTTTTTCTGTTTGTTTGTTTTGTTTTGTTTTGTTTTGTTTTTAACTTTTCTCCTTGGCGAAGCCTTGGCAGGGATCTTTCTGGACGAAAAAGTGAGGGGCAGCCAGGGCAAGACTATGGCATTTTCCCTGTGGGCCTGGTGTCTGCTGCCCAGTGCGATTTCCTTCTTTCTGGCCCCTGCCCTGTGCCCCGCTGCCTGTCCCCAGGCCTCTGGGATGATGGAGGGTGAGTGGTCAAATCTTGCCCCCCTCATGGGCCATGGCTCCAACACTTAGAGGCTTGAGCTTGAGAGTCCTCTAGAGCCCGGAGTCAGACTTCCTGAGGACGATGGTGCAAAGGCGTGGGCACGACCCGATACCCAGTCCTGGGTCCGTGGCCCTCTCCATGACCCCCAGGCTCCCTCCCTGGCATAAGCGCTTAGAGCATCCAACACACACAGCCGCTGCTTTCTGCGGCCACCCTCTCTGGGCAGGGATGGCACACATTGGACAGGAACCCAGCCTCTGAGGCTGCCTGGGATGANN EMBV3_39183 CGCTTTATTGCCATCTGCAATCCTCTGAGATACGCTTCTATCCTAACCAGTACCAGAGTC Gene GeneID:782658|LOC782658:XM_002693375:7_cdna Constitutive 0 NULL GeneID:782658 15 GENE LOC782658 NULL similar to olfactory receptor 586 (predicted) EMBV3_32395 GAAACGCTCTTCAGGTGGTTTGCACAAGGCCCTCTCTACTCTGTCAGCGCATATCACTGT Gene GeneID:517252|LOC517252:XM_002690764:524_cdna Constitutive 0 NULL GeneID:517252 10 GENE LOC517252 NULL similar to olfactory receptor 1276 EMBV3_05531 CGAGCAGAAACAGGCCGAAGCTGGAGAGAAGCTCTTCCTTGTCCTCTTCTTTGACAACAA Gene GeneID:507996|BRPF3:XM_002697205:91_cdna UTR3_Alt 2 NULL GeneID:507996 23 GENE BRPF3 NULL bromodomain and PHD finger containing, 3 EMBV3_35921 GGTATACCCAAAATTACTATTGCCACATACACTGCTTTGGATTTGAGTCGTTATGCATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33631 TTTTTAAAGGGCTCGCGTTAAATGAGGCGGAGGGAGTTCCGCCTTCTGCCGGCCAGTAAA Gene BVV0101_040870 - 1 EMBV3_15342 GK000005.2:110110819-110122672 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201631 1 XLOC_123276 NonCoding TCONS_00201631 XLOC_123276 NonCoding NonCoding - 5:110119493-110120075 - TSS151199 582 2 TCONS_00201631_2 78 0.0945017182130584 1 0 0 0 7.95017173937932e-05 8.5609812281084e-05 0.000212077778868464 0 0 0 9.4898472389795e-05 0 0 0 0 0 3.37195776863517e-05 9.07613377510734e-05 0 0 0.000492848306830345 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.096333457839881 0.435744172104738 0.0615358887329163 0.504031951851342 GTAAAAACAAGATCCCCGCATTCTAGCTCGATTTACCCTTTTCCATACAGGATTTCATTTCACCTTCACACCAACCCCAGAGGTAGGTAGAGCCCCTTTTTGATAAATGAAAACACCAAGGGCCGTTTTTGACAACCGAAAAACTGCCGGGAGGTCTGAGCCCCTCCCTAAATGAAAGGACAGATGAGGTCTGACCCCTTCCCCATGCTTGGGGTGGCTCCGCAGTTCCGAGGCTCGGGAGGTCCCCGGCGGGTCGCAGTGCGGGGCTGCCACTCGGGGACTACATTTCCCAGGAGGAATTGCCCGCAGCCCTGCGGCTCCCGAGTTTTTAAAGGGCTCGCGTTAAATGAGGCGGAGGGAGTTCCGCCTTCTGCCGGCCAGTAAACGACTCGAAGCTTGGTACCGTGCCAGGGTAGGCGGGTGGGGCCGGGTCGCGGTCTATAAGACCCCCCAGACTCTGCAGTGTCTGCGAGGCGAGGTGAGCTCAAGCCAATCTGGAGGCACCCTGTTCTCTTCGTGCCCACCTCTGTCTCGGACTCTATGTCCAACTCCGGGGAAACCCCTGCCAACCTCCGCCCCCCC TCONS_00193368 . 5' 2598 TCONS_00193368 . 5' 2598 EMBV3_05395 GAAGGGCCCCCCACTTAGGGCAAGAGCCATGTGTAGTTCCACTTCTCAGGATAAGACTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36262 ATGATGAAGCACGGTCTTGTCCAAATGCCAGCGGTGCCCCACGGAGAAAAAACAGTGAAG Gene BVV0102_055173 - 1 EMBV3_32341 GK000023.2:8188238-8258749 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132180 TCONS_00132183 TCONS_00132181 TCONS_00132182 1 XLOC_080723 NonCoding TCONS_00132181 XLOC_080723 NonCoding NonCoding - 23:8190074-8194453 - TSS98949 3186 2 TCONS_00132181_1 189 0.208411801632141 3 0.272955687528552 0.000485383085587629 0.000885750055959852 0.000757857943131408 8.87951489607335e-05 0.000597904491543297 0.00022262187123887 0.000289707837637012 0.000365216109825776 0.00046766761018711 9.00610909560535e-05 1.46423460146769e-09 1.0476025887503e-06 0.000616596546638572 0.000188072947434641 0.000457327729553088 0 0 0.000118129218096706 0.00065296594150765 0.000866684682552732 5.27940329691092e-07 0 0 0 0.00055879375553133 0.000235994757348965 0.000406065763002257 4.89691070392966e-05 5.1403056980403e-05 1.5641500822906e-15 XM_580537.5 SLC16A12 PREDICTED: Bos taurus solute carrier family 16, member 12 (SLC16A12), mRNA. 4e-24 118 81.67 0.0373509102322662 0 noncoding 1 1 1 1 -0.06591939878112 0.669494256649795 0.0062632923125835 0.898460410306895 CTGGGGAAGCCAGGACCCAGTGACCTAGGGCTGGGGGTCAGTGCTCTGGGGAGGGCTGAAGATCTGTCAAATACAGGCAAGGGGCAGCTACACCCATGCAGACCCCTCAAGAGCACTCACACCTCCGTGAGAGTTGTCTGAGGCCTCTCCCAGGTGGCTCTGGGGAGTGAGGGGTGCTGTGGGGTGCTGGCTGCCAAGGCCAGTTCTAAGCAATTCAGACAAGAAAGAGCAGGAGTCCCAGCCCACCCTGCAGTCCTACTGCTGCCCTGCTGGAGGCCACGCTTGTCCCCCAGGGAGTCCTCAGTTTTAACATCTGTAAAATGGACGGGCTGGAATAAGACACAGTCCGGAGGCCATCCTGGCCCTGTGGGGCATTTCAGTCATCACCATGAAGGGAGGGAGTCAGCTACTAGCCTGCATCCAGGCAGGGACGTGGGCGGGACAGTCCATGATGAAGCACGGTCTTGTCCAAATGCCAGCGGTGCCCCACGGAGAAAAAACAGCGAAGGACAACACAGCGCGGTTTGCCAGGCACCAGGCAGGCACTCTGCCTACATCGGCTCAGCCAGGTCCAAAACAGCCAGGAAAGCTCAGCTCTGGGACAGCTGGAAGGGTCCCTCCCCAGGTGAACTCACCAGGACTGAGCAGGTGCGCCTGCCCACCCCCAGCCAGGGCCTGGGCCAGAAAGAACCACAAACCACAAACCGACAACCAGAAAAGCTGCTGCGATTTACTAAACTTCAATTTAGTTTTCACCGAGCTGCTTTTGCTTCTCCCAAAGCAAAAGAAGAAACAGACTTCTCTCAAACATGAAATAAAGGACAGCGACACAGGGAAGGACCCCGCACTTGGCTCCCAGGGGTGGGGAGCATCTTCTTCCCTCCCCGCTCCTCCCCACCTCCCCACCCTCTCAGGCTTCCGGCTCCTCTGCAGGCCAGCAGACCAGCCCCTAGGGTAGAGCCAGGAGAGCCAGGCCCAGAGAGGGTCCCGCAGGCTCCCCTGGGCCCCCAGCGCCCCCTCCCCACCTTCCTGAGCCTCCGGACCTGCGGTGGCCCCTCCCTCTCTGCTTGCCCCCATTCCCTCCAGCACCTGCCTGGGCTGGATTCACTTTGACCTCTGCAGTGCCTGGCCCAGCCCAGGTGCTTGGAGAACTCGGGGGACTGTGAATAGATACGTAGGATCGGGATTGAACCTCCTGAGCTGTTTAGATGCCTTGTGGCCCACATCTCACGTTTCCACGGAAGGAGGAGCTGGGGCTCCACTCCCCACAGGGAACCATGAGAGAGAACCTGAGGCCTCCCCCCTCCTTCCTCCACCGCCCACAGCCCCACCTGCGTGGGAGTCCGGGCCGAAATCACTGCACTGCAGGCCACTTCTGAGGCCCCCCTCTCTCCTGTCCCCCTGGGGAGCTGCAATGGCTGGTCAGAGGTGAGGTTTGCTAGACAGTCTCCTCTCAAATGGGCAAGGCCTAGACCCTGGGAGCAGGTCATCAGAAGTCCGTTCTACCCCAGCAGCACCAGCAACAAACCTCCACCTGTTTGAGTCCCTGGGAGAGGGGATGCTCTGCTAGCTTCCTCAAACCCCAGCAGCACAGCCCTCTCCCCACATGGACCACATCTGGGGGAACCACGTCCTCCTCACCTTGATGTCTCTGCGCCCCAGCCTGCACCACACCTCGTGTCCCCCACCCGGGTGTGGGGACGTGAACGGATGATCCCTGGGCCCTTCCCACCCTCCTCTCCCAGGTAATCTATTTCTAGATGAATAGAAAGGGCAGCCCTGCTCGCAGGCACTCGCCCAGGCTGAGCCATGTTCTAAGAGCAAGAAGGAGGCCACAGTGGGGGCGGGGGCCCTTTTCCTCCACGGTTAATGCCCTAAAGCCTCTCTCTGTACGTGGTTATCTGACACTGGTGAGCCTGGGAGCACGTCTGGGGCCACATGGACAGCATCACCTTCATCTCTGCATCCCCAGGGCCTGGCTCCAGGCTCAGAACACAGGCAATTCTCCATCAACAACCAAAGGCAGGTCCCTGCCCCGAGCCAGCGTAGCGCCACCCTCACCAGTGGGGACCCAGGGCAGGGGGCGGGGGGCAGCAGCAGCATTCCAGGTCCACAGAGTGGAACTCAGACCTTGCACTGAATTCTTGCAACTCGCTTATATGATCAGGTGTGAAACATAATCCCTGACCCTTCAGTTATGCAACATGCCATCCGAGTGTGTACCAAGTGTGTACTGAGCTCCCGCTGTGTGCCAGACTCTGCTCTTAGCACTGGGGAAATGCTGGGAGTGAAAACAGATACAGACACCTGCCCTGTTAAGCCCACATCCAGTGGTGGTGCAGGGGAGACAACAGATACATCTACACACAGATGGGGATCCAGGGCTTATGAAGAGACACAAGGCAGGTGAGAAGAAAGGAAATGGCCCGGCAGGGGCTTTGTGAAGGAAACGATAGTCAGGGAAGGCTTCTCAGAGGAGGTGGCATTTGAACAGAGACTAAAAACAGGAAGGGCATGAATCATGTATCTGAGAGAAAAGCATCCCAGGTAGAGTCCAGCAAGTGCAAAGGCCCTGAGGTGAGCATACAATTAGCAATCATTGTTCAAGGAACAGCAAGGAGGTCAGGATGACTGGACAGCAGTAGGAAGGCGGAGAAGCAGGAGAGGAGGTCGGGGGCGGGGCGGGGGGGCTCCAAGCACAAAGCCAAGCAAGGCCTGGTGGGCCACAGTATGGATAGAGAAAGCAGGGCCCACTTTGAGCACAGCAGCCAGGGACTCAGGACAAGAGAAACCACAGGCTCCATGCCAGCCACCCACTCAGGCCACAGCAGTTCACATCAGTTGGAGGGCTAAGCAAGCATATCTCATTGGCACTGGGGCCCACCAGTTCAGCCCAGAAAATGCCCAGCCTTTTTAAAAAAATTTTTTTGGCCATGCTGCACAGCATGTGGGATCTTAGTTTCCTGACCAGGAAGCAAACCTGCACCTCCTGCTTTAAAAATGCGGAGTCTTAACCACTGGACCACCAGGGAAGGCCCCAGAAAATGCCCAGCCTTGACTGTCCCCCTCTCCCAGGGCAGAGGTGCTAGCCACCAGCTCCTGCTTGCTCGGTGTCTCCTACTGCAGCGGCCCCCACCTCCATGCAAACCCTCAGACCTCTCCTTCCCACCTCAACCCCACCCCACC TCONS_00133898 TCONS_00133899 TCONS_00133900 r 5' 1463 TCONS_00133898 TCONS_00133899 TCONS_00133900 r 5' 1463 EMBV3_43115 AAAAAGGGAGGACCACTGCGGGCACTGAGCAGCAAGGCCTGGAGCACTGATGACTTCTTT Gene GeneID:508709|WDR55:NM_001014873:211_cdna Constitutive 0 NULL GeneID:508709 7 GENE WDR55 FLJ20195 WD repeat domain 55 EMBV3_32886 CAGACATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGTGAGCCCCCAGGTCTTCAGA Gene GeneID:534582|NFE2L1:NM_001102515:144_cdna UTR3_Alt 2 NULL GeneID:534582 19 GENE NFE2L1 MGC143343 NRF1 nuclear factor (erythroid-derived 2)-like 1 EMBV3_12025 GGACGACAGCAAGGAATTGCAGCGGTTCAAGGCTGCTCACCTCAGGCTATCTGCAGCGCG Variant GeneID:540984|OTUB1:NM_001034719:95_cdna 364^545 3 EMBV3_28038 GeneID:540984 29 GENE OTUB1 MGC127210 OTU domain, ubiquitin aldehyde binding 1 EMBV3_19359 ACTTCGAATTCAGGTAGATGAAGTGTACTGCCCTTGAAACTCAGCGGCCTCCCTGGCACA Gene GeneID:785429|LOC785429:XR_083998:29_cdna Constitutive 0 NULL GeneID:785429 20 PSEUDO LOC785429 NULL similar to Transcriptional adaptor 2 (ADA2 homolog, yeast)-like EMBV3_23942 CGTTTGTGTTGCTGTCCCCTCTGGGTTTGAGGCTTGCTACTGTTCCTTGTGAAGACTCCT Gene GeneID:614900|IRX4:NM_001098466:41_cdna Constitutive 0 NULL GeneID:614900 20 GENE IRX4 NULL iroquois homeobox 4 EMBV3_27215 ATCCGGAAGACCTGTAAGGAGAAGAGTACCTCCCTCACTCAGTTGCTGGGGATGAAGTGA Gene GeneID:509609|CD101:XM_002686100:94_cdna Constitutive 0 NULL GeneID:509609 3 GENE CD101 IGSF2 CD101 molecule EMBV3_06625 GCTGTTGTCATCATGTCACGAAACAGACCTCACTCTGGTGGCCAAGGGGGTGATCAATTA Gene GeneID:514165|MFSD9:XM_002691186:95_cdna Constitutive 0 NULL GeneID:514165 11 GENE MFSD9 NULL major facilitator superfamily domain containing 9 EMBV3_30382 GTGCTGGTCAAGTCACTGGCCTTTCTCTGCACTCATCTAAACTCATCAAACACTGTCTTC Gene BVT0102_093998 + 0 NULL GK000017.2:56653831-56659324 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077497 TCONS_00077499 TCONS_00077501 TCONS_00077498 1 XLOC_047078 Coding TCONS_00077498 XLOC_047078 Coding Coding PPTC7 17:56655230-56700240 j TSS57896 4945 1 TCONS_00077498_2 207 0.0588473205257836 6 0.890266391166211 4.59216365901207e-07 0.00173853331934964 0.00129487011712086 0.000442620861983184 0.00155003720874787 4.37834773704339e-10 0.00078707536764452 0.00138003340448955 0.0018732820723463 0.00145222767980025 0.000147523177266864 1.24709180226432e-14 0.000197972628445276 0.00141790715263897 0.000491373969022085 0.00148945318332647 0.00342062709561053 1.69567385665604e-06 0.00231152318372604 3.89801290794164e-06 0.000575337668867959 0.000859724710674767 0.000366545114814935 0.00156690538731727 0.000232783677449179 0.00165296218344915 0.00128038419367694 0.00021385915787532 0.000680314498750808 0.00235803536535325 NM_001192610.1 PPTC7 Bos taurus PTC7 protein phosphatase homolog (S. cerevisiae) (PPTC7), mRNA. 0.0 1251 100.00 0.139939332659252 NM_139283.1 PPTC7 Homo sapiens PTC7 protein phosphatase homolog (S. cerevisiae) (PPTC7), mRNA. 0.0 3699 85.16 0.660869565217391 TCONS_00077498_2 sp|Q8NI37|PPTC7_HUMAN PPTC7_HUMAN Protein phosphatase PTC7 homolog; 3e-152 429 100.00 0.995169082125604 2 coding 0 0 0 0 0.0340536716378827 0.793455312083297 -0.0558495597680629 0.40228090082866 CCGGGTCCCCTCTCCCCAGCCCCGGATCCGCCTCCTGGGGACTCCCCTGCTCGGGGCTTTTCTAGCTCCTCCAGGCGGTAAGAGGAGCCAGTGAGCCAGTAGTAGTTCATTTGTACGGAGCGCTTACTAGGTGCCAGGCGCCGTGCCAAGCGCTTGAAGGAGTTGCAGATGGTGTAGGAGGATGGAGAGACTATGGTGTTGATCCTTCTCAGTTCTCAGGGACTTTAATGCGAACATGTGAACGGTTAGTAAAAGAAGGACGGTTTGTCCCGAGTAATCCTATTGGTATCCTCACCACAAGCTACTGTGAGTTGCTGCAAAATAAAGTACCTTTGCTTGGTAGCAGTACTGCGTGCATCGTGGTGCTGGACAGAACTAGCCACCGCTTACACACAGCAAACCTGGGTGATTCAGGCTTTCTGGTTGTCAGGGGTGGGGAAGTTGTGCACCGATCAGATGAGCAGCAGCATTACTTCAACACTCCATTCCAGCTCTCAATCGCACCCCCCGAAGCCGAGGGAGTTGTCTTGAGTGACAGCCCAGACGCTGCTGATAGCACATCTTTTGATGTCCAGTTAGGGGACATTATCCTGACAGCGACAGATGGACTCTTTGACAACATGCCTGACTATATGATCCTTCAGGAGCTAAAAAAGTTAAAGAATTCAAATTATGAGAGTATACAACAGACAGCAAGAAGCATTGCTGAGCAAGCTCATGAGCTGGCCTATGACCCAAATTATATGTCACCTTTTGCACAGTTTGCATGTGACAACGGATTGAATGTGAGAGGTGGAAAGCCAGATGACATCACCGTCCTTCTCTCAATAGTGGCTGAGTATACAGACTGACTCGCCTAGGTGTCGGCTCCCGCCTCCCCTTCATCATCCCAGATTCTGCCCTGCCGTGTGTGCTGATCCTGCTGGCAGGACCACGTCTCTTTGCCACTGATCTCAATGGCCAGTGATGTAAACCTTTTTTGCCTGTCTCTTTGAGATCCTTGTTGAGAACCACTACTGTCATTCTACTGCTCATATCTGCCAGCAACATTTGAAGAAAATCAAGATCTGAAGATTGGCCTTCACATTGTCCTTTCCATGATGGGATGGATGTTTTCAAAGCCAAAATGACTATTACTTTTTGAAAACGGTTGAAGTATTGAAAATGAGTAATATTGGTAAAGTGAATTCAAAATTACAGTGTGTAAAAGGGATTTTAAAAGTCTGACACAAATTGTATGTTATGATACATCTACTAGAAACATACTCATCAAACGATGCGTTACACGTGTACTATACAGTCTGTGTTATGATCGAGTGTGGCTTTATGTTTTCATTATAAACTCCTATTTTTCAGGGGCTTATAATTTTGCTCTAAAACATTGCTCTGGATTATAAAATCTTGATCCTGGGAGCTTTTTTTTTTTTTTTGCAGGTTGGAAAGAAATTCAGTTTAGTTCTATGGATGCAAATGTTTCATGGTTTTTAAAAGATGCTTAATTGTGCTCCTGTGATGAAAGTTTCAGCATTTTAGTGCATATCACAGGCTGGTGGCTTATCTGCAGGAGGGGTTGGGGAGACTCCTTACCAGAATTTTTTAATGGAATATTATTCAAGGTTATAAAATTCCTCAAGGCCTAGGTATTTAATGTTGCAGCTGAAATTCCTCCCAGCTGTCTGGTATGATTCCCCCATGTGAGAGCTCTAGGCCCACAGGCCTGAAGGGTTGAGAATGGACAGCTCTAACTTTGAATTTTGTTGGCCTATCAGGTCATGCTACCCCTCATGTCTTAGACCTCTTGTTAGTAGCCTTGCTTTCTGTAGAGCATGTACCAAATCCAGGGAGTCCATGTGAAAGCACCATGGGAGTGGCACAAGAGTCCACGAGGAAGATGTCTAGTGATGACCTGACATTTGCATTTGCCCTCCACAGAAATTTAGGGGTTTCCAAATCAAGCTTAATGTTTACAGTTTCCAAATAGCCATCTTGCAGTGTATAGTTTTCCTATAAAATTACCCCATGTTCAGTTTTTCCATTATCTGCAAGCTCAAAGTTATTTTTAAGGTTTGTGTACAAGTCGACTGCTGTAAAGATACATATTTTGGGGTCAGTTTTTTCCTTCATTAACTTGGTGGTAGAAAAATATATATACTTAGAAATCCTTAAATTAAAGCCATGTTTTATATATAAGTCAGGTAACATTGGTGTATAGATAAGAATGCAATTAAACCTGATGAGAATCTACTTGAGGAGAACATAGAAAGTGTCTTTCTCTAAAGGAGATACTTACTCCCTGGTTTATTGCATTAAAACTTATGTTTGAGGTTACCTCAACTTGTTTTAAAAAGATTTTGTTTTGTGAATTTGTACTGTATATTTGAGTAACTGTCAAGCTTGTTTTATTTAAAATTGTTTAACATGTACCATGTACATGTCATTACTATATTTCAATGCATCATGCTTGTAACAGGCATTTCATTTATAATAAGAATGAGTTATTCATTTGTAAGCCGTTCAGTAATTTATCTACTATTCCTAAATTGGCATAATGTTTAGATACCTATTTTGAATCACCTTTAATTACTTGTCAGAATGCCTTAACTACCCTAACTTGACAAAACACAATTTGGTAAAGGAGATCGGGGGGGTGGGGTAGGGAGTGGAGAGAGACTGTTCAAATAATGAGAACCCATCGTGCTGTGATAATACACAGACGAGTGAGTGGCAAGTGGCAGGGTATTTATTTTGCACAAACTATTTGCAGTCTTTCTGTATTTAAAAAGTGAGGAAAGTTGCATCCAGAAAGGTTTTGTTGGAAGGAATACATTTACACTTGGACTGACAACTTCAGTTGTTCAGAAGTTGACAACTTCTTTTGTTGGGTTTTTAATTATTTCTGGTCAGAGGCATGGAGCCTTATGATCCAGGTATATTTTGTATTAATTTTCCATTGCATACATTTAATTCCTGGTAAGAGCAGTGCTGGTCAAGTCACTGGCTTTTCTCTGCACTCATCTAAACTCATCAAACACTGTCTTCATAAAGGTAGATTGATGGTATTTTACACAACTCATTTAATCAACTTAGTATTTTTTGAGAAATGATCGTTAGAAATTGACGACGTGTTTCAGTGATGTTGAAAACAGTGGGACAAGAATTGAGTTTCACAGGGGAATTGACTTTGGACCTGGCCTGTAGATTAGGGACGCAAAATATTTTCTGTTTTTCCCCCCTGCCCTTTTTGTGTTATGCACTTAATTTTATGACTTTGGGGGTCTATTGGAGTGCTGTTTAACAACTCTCCTACTCTCAATGGTCAGAGGCTGTGTAGGTACCCATACTGGAATTTTCCAGGCCACAGGACCCAAGTCTGTGGGGTGTGCCTGACATGTACCACTTGGTGGGTCTAATTCTAAACTTGATGTGTTAATTGTACTTTAAATCAAGCAGTATAAACACACACATTTGCCTCGTGTAGTGGACTTTTATAACAAAAGAGAATCTGGATTTCTAATTTACAAATGGCAAATTATTTATCCCTCTCTGGATGCACCAAAGACCAGTAAAGTTTATAGCTTTTCCATCTATATTTATAAAGCAATACTGTATTATAAAAGTCAATATTTTTATCACATGCTTGAAATTTTTATTTTGTTCTGTTTTAAAGTGTGCACTCTAAACATATCAGAACCTTATTTCTTCCTGTGAACTTAGGCTGCCTGCGCACAAAAAAAAAAAAAAAAATTACCAAATGGATATGCAGTAGAGTCCATAGACTCTTAAAACTGAAAGAAGAAATGAGGTTGGGAGAACAAGTTCTTTGTCCTGAATTACTGTACTGGCTTGACATGGTTGATGGGTACTAAATCACAAAAGAATCCATTCCAGTTGTGCATGTCTGAGGGTTGGGCTGTGACTAGATTTAGAAAATAGACTTCAAGCTTTGCATGGTGGGCAGGTATCTTACCCCATCAGTTGCATTTGTTCTGGGTAGAACAGTGGCCTTCAGTACCACCAACGTACCACATCAAGTAACAAGGCAGGAATTGTGGGAATTCACTGAGTCAGTTTTGAGCATTTTGGAGATTGTAAACAAGATTGGCTAGAACTGTAAATGTTTGTACTTTTGATTAAGTTCATGGTTCCTTGTCACCTTATACCAGCTATCTTTGGTAGAAGCTACAGCATCCAATTTTCCTGGAAACTATCACATTTGTGCATTTAACAAATTTTGCAATAGCAAAAAACCCAAAATCTGCTTATAAAACAACATTTGGAACAGAAAACATTTGGATTCCACTTGTTAAAAAAAAATTATTTGCAAAATTGGTCTTCTTAGTTAAAAATCAGCAGTTGTCCATGTCAAAATTTTAACTGTAAGCAGGTAGTTTATGGCAAAGATGGCTAAACAATGAAGCAAGTTTGAATTTGTGTATGCTAATAAGCTGCTTTTTTCTGTTGAGACTATCATTATTTGTCTTATTACCCAAGAGGCAATGACCTGAATTGGATGTCTGAAGTATAACTTATGCAGGAATAGTTGTGTAAATACATTTAAATAAACTGTAAAAATATTTAATAAATATAGTATTTATACTAATCTGTGTACTCCATTTAATTTGAGTAGTAACAAGACACTGTCCTTGACATTGAGTTTGTTGGTCTCTATCAAGTCCTCATTTCTAAGCGTCTCAGTCTAGCAGTGACTCCATACTTTGTGGCTATCATTTCTGTCTTTCACTAGTTTATCGCTAAAGCTCTTTTTCACCAGCTGATTTACTACATCAGTTTCAGTTCAGTCACTCAATCATGTCCGACTCTTTGTGACCCCATGAACTGCAGCACGCCAGGCCTCCCTGTCCGTCACCAACTCTCGGAGTTCACTCAGACTCATGTCCATCGAGTCAGTGATGCCATCCAGCCATTTCATCCTCTGTCGTCCCCT EMBV3_17440 TGGCTTTGCTTCACCTCTGGGTCATGATTGTTCTGTTGACTTACACGCCAGAAATGCACC Gene GeneID:510412|GOLGA5:NM_001098007:202_cdna Constitutive 1 NULL GeneID:510412 21 GENE GOLGA5 NULL golgi autoantigen, golgin subfamily a, 5 EMBV3_42394 GGCTCTAACCTGTGCCCCCGGTATGAATTCTGGTTCATGTTGATGTATCCCAACTTCTCC Gene BVV0102_067059 - 0 NULL GK000023.2:45348036-45370136 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30950 TAATCCTCTCCTTATGTGGTCATCTCAGGCGTATGAACGGTGTAGACTGTAGCTCGGAGG Gene GeneID:664643|T2R12:NM_001046630:11_cdna Constitutive 0 NULL GeneID:664643 5 GENE T2R12 NULL bitter taste receptor Bota-T2R12 EMBV3_08420 AGCAGGTTTCCGTTAGCTTTCTGTGTACTGTGAGGAGAACCCCACCTCCACACCATCACT Gene BVV0102_131519 + 0 NULL GK000003.2:19212519-19238264 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39308 CTGCTCATCAACACCACCTGCGACCTTAAGGGCTACACCAAGTCCATCGACATCTGGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22611 CCCTTCTCCCATCAGTCTGGTAACAGGAAGAAACCACACCATCAACACCAACAAATTTCC Gene GeneID:509799|BAZ2A:XM_002687418:157_cdna UTR3_Alt 2 NULL GeneID:509799 5 GENE BAZ2A NULL bromodomain adjacent to zinc finger domain, 2A EMBV3_42855 ATTGTGAAAGGCAGATTCAGGTTTCTGGTTTGGGGCTTTCTGTTACCTCATTTATGAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28168 CAAGGTCCTATAAATGCCCACTGAACCCTGCTTGTTCAAAACATGAAAACACTTCTATAA Gene GeneID:506430|VTA1:NM_001038045:2_cdna Constitutive 2 NULL GeneID:506430 9 GENE VTA1 MGC133887 Vps20-associated 1 homolog (S. cerevisiae) EMBV3_07694 TTCCAGTGATTTGTCTCAGAATTCTCTGCTTCAGCCGCACCTGGAGTAGCATGCCCCAGT Gene GeneID:514370|TMEM180:NM_001014925:132_cdna Constitutive 1 NULL GeneID:514370 26 GENE TMEM180 C10orf77 MGC139733 transmembrane protein 180 EMBV3_21756 CCTACCCAAGTCTAGGTCCTTACTGTGAAATGTACAACATGAAATTTGGACCCGGTTCTG Gene GeneID:511896|GTF2H3:NM_001079589:135_cdna Constitutive 0 NULL GeneID:511896 17 GENE GTF2H3 NULL general transcription factor IIH, polypeptide 3, 34kDa EMBV3_23979 AGGAATTGTTGTGGGGGCCTTACTAGGAGCTGGTTTGCTAATGGCCTTCTACTTCTTCAG Gene GeneID:281358|NPR3:NM_174127:4_cdna UTR3_Alt 2 NULL GeneID:281358 20 GENE NPR3 NULL natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) EMBV3_37299 CTCCAGGGGCTTGGGAAAAGCCAAATTGCCAAAATTCAAAAGCGGCCTCCAGGGCCACCT Gene GeneID:338054|ARHGDIA:NM_176650:36_cdna Constitutive 2 NULL GeneID:338054 19 GENE ARHGDIA NULL Rho GDP dissociation inhibitor (GDI) alpha EMBV3_02038 TCTCTGCTGTAACTGAGGAGTGGCCTGGATCCTGATGCCGCTTCCCTTACGATTTCTTTT Gene BVV0102_067878 - 1 EMBV3_01975 GK000013.2:76078158-76083303 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37514 AGACATTGTTCTGCTGGACGAGGCAACGTCTGCGTTGGATACCCATAATGAGAGGGCCAT Gene GeneID:783257|ABCB6:NM_001098156:142_cdna Constitutive 0 NULL GeneID:783257 2 GENE ABCB6 NULL ATP-binding cassette, sub-family B (MDR/TAP), member 6 EMBV3_15661 GCACGGGAAGCTTTGGGAGATGTTGTTTACTGTAGTCTGCCTGAAGTTGGGACAAAGTTG Gene GeneID:508238|GCSH:XM_002690501:469_cdna Constitutive 0 NULL GeneID:508238 10 GENE GCSH NULL glycine cleavage system protein H (aminomethyl carrier) EMBV3_15023 GGTTCAGGAAACAGCCAAACCTTAACATCTCACAAGGAGGGAATCAAGGTGCCTGCAAGC Gene BVV0102_265993 - 0 NULL GK000005.2:2352694-4048887 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190754 TCONS_00193832 2 XLOC_116734 XLOC_117604 NonCoding TCONS_00190754 XLOC_116734 NonCoding NonCoding - 5:2405467-2440706 - TSS143090 547 2 TCONS_00190754_2 60 0.382084095063985 3 0.984562120438163 0.000362437761443442 2.50525029720463e-12 1.63850151874647e-10 0 3.12653886925887e-16 0 1.6499692257289e-18 0 0 0 0 0 0 0 7.14559539880048e-25 0 0 0 1.44523550796039e-15 0.00148321441414231 0.001315295722565 0 0 0 1.46275905380006e-15 8.77075649793579e-05 0.000524013087615662 0 0 0 XR_234474.1 LOC101904950 PREDICTED: Bos taurus uncharacterized LOC101904950 (LOC101904950), 0.0 962 100.00 0.972577696526508 0 noncoding GGAGTGAGGTGAAGAGAAATGTCAGGTGGGCTTGGGAAGCTGAGAGGGGTTCCTGTGCTGATGGTTAATAAGGCAGCATCTCATGCCTACAACCACGAGGACCTGGGTTCTGCCAGTACCCAAATGAGCTCGGTGCTACTCTTCCCTGGAGCCTCCAGAAAAGAACACAAGCTTGCAGGCACCTTGATTCCCTCCTTGTGAGATGCTAAGGTTTGGCTGTTTCCTGAACCTTCCTGAGACTGCAGTTGGCTGGATCCCCATCAGATATTCTCTGCTCCTGAAATCCTGGACAGTCACCCTGATTCACTTGGCACCTACATATGCACCCAGTGACCTGGGGCACATCTGCAGGCCTGTCAGAGCTCATCCAGAAAGGCTGACTTAGCGTGCCCCAACTTTTCGTATGATGGGGCATGAGAGCAGAATGTGGAAGCAGGAGTGTGCATGAAATGATTGTGTGACAATGATGCTAACCACATTCAAGAATGAAATTTTCATAAAGATACATTCAAACAAAAATTAAAAATAAAAGACACGTGCAATGCAA TCONS_00190745 TCONS_00190746 TCONS_00190750 TCONS_00190751 TCONS_00190752 s 3' 52047 TCONS_00190745 TCONS_00190746 TCONS_00190750 TCONS_00190751 TCONS_00190752 s 3' 52047 EMBV3_21212 AATCTGTTGGTAACCGTTGAAAAGGCCGAGGCAGCTCTACAAAGTGAGAACTCCAGCGAC Gene GeneID:508428|TTC39B:XM_002689579:21_cdna Constitutive 0 NULL GeneID:508428 8 GENE TTC39B NULL tetratricopeptide repeat domain 39B EMBV3_10795 GCCAGCTCCTACAGGCGGGGGAGAAAGAAGCGTGTCCCTTACACCAAAGTCCAATTAAAA Gene GeneID:787194|LOC787194:XM_002686850:33_cdna Constitutive 0 NULL GeneID:787194 4 GENE LOC787194 NULL similar to Homeobox protein Hox-A13 (Hox-1J) EMBV3_37325 CTCCATCCCACCCCCTAATCATTGCAGTGTCCAGCCCAGTGTTGAACAGATTGTAGTGTT Gene GeneID:514154|NAT15:NM_001075649:159_cdna Constitutive 0 NULL GeneID:514154 25 GENE NAT15 MGC139710 N-acetyltransferase 15 (GCN5-related, putative) EMBV3_12064 TTGCACGATCATTAGGGCTTTTGGTCTGTTTGTTCTTCCAGAAGGTGAGAGGGCTGCTCC Gene GeneID:507484|SPINT2:NM_001045971:556_cdna Constitutive 1 NULL GeneID:507484 18 GENE SPINT2 MGC129087 serine peptidase inhibitor, Kunitz type, 2 EMBV3_01800 GATTGACTATCTCCCTCTCTGGCTCAGTGTGAGGACTTGCCCAAAACCAAAATGAGGGGG Gene GeneID:282612|CYHR1:NM_001015532:17_cdna Constitutive 0 NULL GeneID:282612 14 GENE CYHR1 NULL cysteine/histidine-rich 1 EMBV3_05397 CCCCGGAATAACGGACGCCTCAGGAAAGCTTTCCCAATACAGACACCCAGTCAGACTATT Gene GeneID:781965|RIPPLY2:XM_002690213:5_cdna Constitutive 0 NULL GeneID:781965 9 GENE RIPPLY2 NULL ripply2 homolog (zebrafish) EMBV3_19867 CCCTTTGTTGCACGTGGATGGGGATTCTGAAGTGCGCTGTATCCGCATGTAGAACTTCGT Gene BVT0102_138644 + 0 NULL GK000030.2:142679625-142758775 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248602 TCONS_00248604 TCONS_00248605 TCONS_00248601 TCONS_00248603 1 XLOC_151644 Coding TCONS_00248601 XLOC_151644 Coding Coding CLCN4 X:142754818-142773168 j TSS185886 4626 4 TCONS_00248601_15 89 0.0877648076091656 3 0.748051664940869 4.34537192514773e-38 0.000339447818637895 0.000101511307968041 2.06555828763445e-09 0.00037689227894204 9.7241815130391e-06 0.000238189419216024 1.52086957004946e-19 0.000269164533087545 4.27456351591742e-05 6.69594508062563e-05 0.000110421131996048 1.25697999946955e-05 2.93840348267222e-05 8.59598605224444e-06 8.56603417611648e-24 0 1.6452857202204e-05 0.000212501535163123 0.000472541254990466 8.7345985457079e-05 5.68330851553444e-05 2.03965449388041e-12 3.39104033737858e-05 1.98869119463094e-32 2.32869796447533e-16 0.000148369841545638 6.94715494492557e-14 3.78865142715059e-06 1.33173531661044e-10 XM_005228495.1 CLCN4 PREDICTED: Bos taurus chloride channel 4 (CLCN4), transcript 0.0 6199 100.00 0.74275832252486 NM_001256944.1 CLCN4 Homo sapiens chloride channel, voltage-sensitive 4 (CLCN4), 0.0 2003 75.83 0.610462602680502 TCONS_00248601_1 sp|P51793|CLCN4_HUMAN CLCN4_HUMAN H(+)/Cl(-) exchange transporter 4; 2e-56 187 97.70 0.988505747126437 1 coding 0 0 0 0 -0.0239687872667005 0.968853906615722 -0.0133445621048789 0.78598023250293 TGTTTGGAGAGGCAGCATGCAGTGTAAATAGTACCTATATGCTTTCCATCAGACGGAAAACAGTATGAAAGCTGCTATTTACATGGTTTCTGGGAAGAGAATGCCAGACAGAGGCAGGAGGGCATCGTAAGTGACTCGGTCATGTACTTCACTGAGGAGCCCCCCGAACTGCCGGCCAACAGCCCACAGCCCCTGAAGCTGCGTCGCGTCTTGAACCTCAGCCCTTTCACGGTCACCGACCACACCCCAATGGAGACGGTGGTGGACATCTTCCGGAAGCTGGGGCTCCGCCAGTGCCTGGTGACCCGGAGCGGGAGACTTCTTGGCATCATCACGAAAAAGGATGTTCTGAGACATATGGCCCAGATGGCAAACCAGGACCCTGAATCCATCATGTTTAATTAGAAACAAGATGGTAGTTTCTTTGAGAAAAATACAACTGTATCATTGGAAAGAAATAAACAAATGATAGTTATTATCCTAATGAACAGTCATGCACTGGGAGCAGCGGAAACAAAAGCTTTGTTTGAAAGGAAGGGGAAAAGAATGAAACTTAAAAAAATATACATCTATGAGTAGGCATTTTATAGCTTTAACCCCTTATGAGTTTCAAGCTGTGTTGTGAGTTTAGTAACTGCTATGGGGGCATGTGGGTGGGGGTAAATGATGTGGTTTGTACAAGGATCTGGAACACAATTGCTGAGTCAAGAAACATTTGCCCCTTCTGTTGCAGGCTGGTGTTGGTAAAGCTTTGAATCTGAAAGGCCAAGGGGTATTGGCGTGTCAGTGTCCTTATTTATTGGTTCCTGAGGTTTGGCTGCTATGTTACTGAATCAGACTAAAGATATTTGCACTTACTTTGTTGGAAAAGAAAAAGAAATTAAATGTGAACATAGCGAAAGCTGCAAGTATGCTAGTGGGTTCACTTGTGATGAGCCGTTGCTGGCTCCTGTTCTCAGCCTGTTTTATTGCTTATCCCTCAGTTTCGGAACCAAGATTGGGTCTTATGCCTTGTTGAATATGAAGAAAACATTTCTCTATGCAAGACTAGCATCTGGGGACTGCACGACGAACTGTTGGAGCATTTAGTGCTGTGCTGTTTCCTGCCACAGAAAGAGATTTGTCCTTATTTTGAGGGTATACATACCCATCATTGATTTGCATCTCCATTGCATCTGCTTCATTTATTGCTGTTGCCTGTGCATTCTTAAATATTGATCAGTCTAGCGCTTTCCAAGGGCCATGTCCTATATTCTGCCAGCTTGCCATAGTGACTTGAATTTCCAAATAGCATATACAAATGTCAAAACAGACTACCCAGTGTTAGTGCTTATTTTTCTTCTCAGATCTTATTAAATACGGCTGCCGAGAGGGTAAGGCAGATGAGTTCTCAGTGGGAACTCCTCCAAATGGATTGCAAGAGAAATACTAAATTGATTCTAAATCTGTTCCATTCTCCTCTCTGTAGGATGCAAAACATCCAGCTTTAATGTATAAGCATGCACTTTCATATTAGCAATCAGAGCACAGGAGGACAGAGTTAAATTTGAGACAGCCAATTTGAGCATCTTTGAGTTGAACGTAATGATACATTTATTCTTTTAGTCAAGACTTCGGTTGTGTCTGTGGGAAGGAATTAAGCTATGTTTCTTAGGTCCACTGGGTGATGTCGGTAAGATTGATGCCCCTTGTCCTTTCCCTTTTGTCTTTGTTCTTTCCTTTTCCCTGAGTCATCCTCATCCTTTTCAGTCTCATCATTGGCTCTTGATGTATTAGGTGTGCATTTGGCTGCAAATAATAGAAAACACACAGTGAAGAGTGGACTAAGAAACCTGGAGGTGGGCTCTCAGGACTGGGTATCCTTGATGACTCATGGCCTTTGGTACTTTTTCTCCATATCCTTACCCCTTACCCGTTGGCTTCCTGCCTCATAGTCACAAGATGGTCACTGACCTGCCAGATCTGATAACTGCTCTCTAAAAGCTGGAAGAGGAATGAAGAGGCAGGTGACAAGGTGTATTGTGTGCGGGGGGAACACAGAGCTTTCCTAGAGATGATTGGCTTACCTCCATTGGCTGAAATTCTGGTACCCCCCCACTGCACATGAGTCTGGGAAGGAGAGTATTTAGCTATGTAGGCATGTTGCACTCAGTGAGATTGAAATTCTCTGACTAAGGAAGGGGGATTGGCCCTTGGGAGGGGGATGGTGTCTACTCTATTGGATGCTGTCATTGTGTGTTTGTCATTGTTCTTCCTGCCATCTTCCCCCTCTGTCTTGCTGACCACATCAAACACTCTCCCATGACCTTACAGCCCCCTCCCCTCTTGGATTCGACCTGGCACTCCCAATCAGAAGCCATCCTTTCTTAGCCCTAATAAAAATGTTTATTCTGGAGAGAAACCCGTCTATAAGAGGGTTTCGGTGAAACTTCTAGTAGATACAAGAAAATATACTGATGGGTTTAACCTGATTGAAAACTTAAAGGAGTTGAAGTCAGATCCTGCTGACAAAAGTATGGAAAATGTGTCTGTAATTAACTGGCCTCCTTCCAAATAACAGCAGACAGCCACTTCAGTGTGGAACGGTCAGTCTGTGGTAGTAGAATATACTCTTAGGTCCTATAAGAGAATGACATTTGTGGTCGCACTCATAGGACCTACGTACTGAGTGACAGATCATAATGTTTTGTTGCTGTTGAAGTTTCCATGGAACAGTGCGAGTGAAGCTGGATTCTCCTGGGCTTTCAGTCCTCAAAAGTCTTAATGTAGTTCCCCTCTTACTCCTATATAGGCTTTCCAAAGAGTTTTAGTCATAGCCTGGATTTATATAATCCAGGACACCCTGTTAGCTGAAACATGGAGCTTCAGAAGGGAACACAAAACAGTGAACAGACAGCCAAAGTTCAGTATAACCACAGAATTCGCCCTCCTCCAGCTGAGGCCTGGAAAGAGGAGAGGAGAGGAGGGGGGAGTTGACTCTGGGCCGAGGTCAACCATGGGCTCATGTCCTCTCCCCCAGTGCTTAGCTTAGAGTCAACTGTGGGGCTTAGGGCCAGCATTGGACAGCCAGGTCAGGGCTGGGATGGGGGGCTTGTAGCGCCACTGCCAGAGTCAACTGCCTGCCTCCCCTGGAGCCCTGACTAGCCACTGATCCTGGCCTCAGACAGACTCACAGGGAACATACCGCTGGGCCCTTTGTTGCACGTGGATGGGGATTCTGAAGTGCGCTGTATCCGCATGTAGAACTTCGTCCACTTTACCTGGTGATCTGGTGAACGAGATGAGTAACTCTGGAACTCTGACTCAAGTTGAATACTGTTTTTGTTTCTTTTTCCAGAACCAAAGTTTGTAGACATTCGTAGAACTTTCTGGGTTCTCTCTGAATAGATTTTTTATGTGAATAAGATATAAATATGTAATGGAAAAGGAGTTCCATAATGAGGCACATTGACCTACTTCTTGCTGTCGTTTTCTATCACTGAGGGAATGTATTGTAGATGGACAGATGGCAAATAAAGAGCATCCTGAGTGTGACGTGGGTTTCTTGTGTTTTTCAGCACATCCCCTGGGAATGCCCATGTGCATGTGGCTTTTATGGAGAGGCAAGTGTGCTAGAAGCAAATCCATATTCAGTGTTTGCTGTGGTAATCTCATAGTTCTCTATTTGAAATTTCTCGATGACTTGATAAAGGAGAGGACATGTCAATAGGAATTTTTTTTTTTGGCCCTAATAAGTCACAGAAACTGAAAAAAATGTCCAGCAGTTTGTTTCACTTAGGTGAGAACCGATTCCTTTAAATTATCAACACATGCGAAATCTGTTTAGCATTCATTGTATTCATTATTCCAATGCTGAGCTGGAAAAGGTGAGAAACTCAAGGAGAAGAACTATTGAATTTCAAGTAATTGTAATATTATATCTTCATTTTCATTTCACATGGGCAGCGTTTTATCAGACTCTGCTTCTAACTTTTGAAATGGTTGACATGAGGAGGGAACTTGTCCCTGTCTACGTTGGGGAACATGAACCAGACTCCATTTTCACTGACGTGGGTCTAACTATTTATTCGCTGTCCTAGTTGTGCTGGGAAAGTAATATATTCACGTTTGGTGTTGGAATGATGATATAGCAATGTGGTTTTTTTTTTTTATTTTAAATATTGTAACACTGTGTAAACATTGGCAAATTACTGAACATTGTATGTTTGAACTCTGTATTTTTAAAGAAACTTTTTATTTTATTTTTTAAAATTTTATTAGAGTATAATTGATTGAAAGTGTTGTGTTAGTTTCAGGTATACAGCAAAGTGATTCAGTTATACATATGTTCATTCTTTTTTAGATTCTTTGCCCATGTAGATTATGACAGAGTGTTGAGTAGATGAGTTCCCTGTGCTAAAAAGAAGGCCCTTGTTGGTTATCTGCTGCTGAGTCACTTCAGTCGTGTCGGACTCTGTGCAACCCCATAGACGGCAGCCCACCAGGATGCCTGGTCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCATATATTAGTGTGTGTATAGCTTAATCCCAAACTCCTAATTTATCCCTTCCCTCACTTTTCCCCTTTGGTAACTATAAAT EMBV3_20260 TGCAACACTGCAGCTATACCTATGGGTTATGACAGAGACAAGTGCCAGGCGGTCTTCAAC Gene GeneID:616019|MSMB:XM_002698973:132_cdna Constitutive 1 NULL GeneID:616019 28 GENE MSMB NULL microseminoprotein, beta- EMBV3_09160 GAGACCCTGGGACTAAGGCCAGGAACAGGGACCAGTTCCCCGGGGGGCCAATTCACCTTT Gene GeneID:512000|PITX3:XM_002698452:457_cdna Constitutive 0 NULL GeneID:512000 26 GENE PITX3 NULL paired-like homeodomain 3 EMBV3_40302 TGGCTGAGCTCCTGCCTTCTGCCAACACATCAGTCTGTAGCACACTTTATTTTTATGGGC Gene GeneID:514512|TMEM116:NM_001040528:159_cdna Constitutive 0 NULL GeneID:514512 17 GENE TMEM116 MGC127791 transmembrane protein 116 EMBV3_13680 ATGCGATCAGCCGATGAGGGGCAGACTGTCTTCTACACTTGTACCAACTGCAAGTTCCAA Gene GeneID:535288|ZNRD1:NM_001046400:165_cdna Constitutive 2 NULL GeneID:535288 23 GENE ZNRD1 MGC140339 zinc ribbon domain containing 1 EMBV3_27892 AGATGAGATCCAAGGGAAACCGAGACAGGCCATGGAGCAATTCTAGGGGCTTATAGCTCC Gene GeneID:614042|CDC42SE1:NM_001035112:151_cdna UTR3_Alt 2 NULL GeneID:614042 3 GENE CDC42SE1 MGC127300 CDC42 small effector 1 EMBV3_27976 ACAGATCCTTCGCGAGCGAGTAAACAAGAGGCGGGTGAAGGAGATGGTGAAAGAATTCAC Gene GeneID:523399|IPO13:NM_001105390:197_cdna Constitutive 0 NULL GeneID:523399 3 GENE IPO13 Imp13 importin 13 EMBV3_16847 GCACGACTCCAGATTACTTCCTCCTTCAAGGTACTGCTTCTCTGAGATGGCCCCAGTGTG Variant GeneID:505512|SAE1:NM_001081711:127_cdna 802^946 2 EMBV3_26973 GeneID:505512 18 GENE SAE1 MGC151535 SUMO1 activating enzyme subunit 1 EMBV3_07573 CCGCGGTCACTCTCTACTATGGAACCATTACCTTCGTTTATGTGATGCCCAAATCCAGTT Gene GeneID:617062|LOC617062:XM_002693071:391_cdna Constitutive 0 NULL GeneID:617062 15 GENE LOC617062 NULL similar to olfactory receptor MOR204-11 EMBV3_34673 GTGTTCGACTACGCCCAACCCCACTTGACTGAACAGGGCTAAGCTGCCACCAATGATTAT Gene BVT0102_160322 + 0 NULL GK000024.2:52123618-52670174 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043994 TCONS_00043998 TCONS_00046298 TCONS_00043995 TCONS_00203605 TCONS_00044002 TCONS_00043999 TCONS_00044001 3 XLOC_026092 XLOC_026679 XLOC_124209 Coding TCONS_00046298 XLOC_026679 NonCoding NonCoding - 13:75936791-75944113 - TSS33604 2667 2 TCONS_00046298_6 65 2 0.635978691435596 0.117355573174621 0.122232725008256 0.0960433040590683 0.0785399046873406 0.0821604184298345 0.0394090177219596 0.0741836450351765 0 0 0.00579910729096193 0.00169290018313826 0.00200233211851379 0.0153187981918433 0.0292183985001509 0.0247064269553073 0.000569822662372346 0.00104645035008147 0.000159934387645263 0.144802068640341 0.126849004645232 0.041004998188019 0.000124048933140446 0.000594904107218173 0.000240661332941728 0 0.10114963463578 0.0723688234056042 0.000631243961194652 0.000359370072112038 0.000838246734222869 XM_005192523.1 LOC101910051 PREDICTED: Bos taurus zinc finger protein 629-like (LOC101910051), 0.0 682 100.00 0.141357330333708 XM_005259769.1 ZNF681 PREDICTED: Homo sapiens zinc finger protein 681 (ZNF681), 2e-59 235 67.41 0.267341582302212 0 noncoding 0 0 0 0 -1.68952306803043 0.0291619004466073 -0.356673883506427 0.00498675014719667 TGTTGGAAATTCTTAATATATTTTAAACACATAGAATAGTTTCCATTTAGGTTGAGTCTAAACCAGAATTTTAAAGACCAAAGGAGTAACTGCCCCATTTTTCCCTCCTTACCCCAGTAACCATTTTACATTTTCATAATTGCATTGATCACATTTATTTTATACTCATCTTTTAAACTTATTCAGTTGCATTTTCATTGTATATATAACTCAACAGACACATAATTTTATAGGTTATTTGCAAAAAGTGAGCTTATGTCCATACCCTTTCTTAGAGATTTAAAAAAAAGCACATAAGGAATGAACATGGGATGAGGAGCTGCCTCCAATGATTACACAACAATTTAGCCATGTGGCAGCCACTATAATACTCTAATATCTGGGAAAGCAGAGGTCAGAAAGATGAGAGAACGACCCACAAAGAAGAAACTGAATGTTTTCCATCAATTTCTATGGCTTGAGAGCAGTGCTAAAGAGACGTGTTCGACTACGCCCAACCCCACTTGACTGAACAGGGCTAAGCTGCCACCAATGATTATGGGAACTGATTCAGAAAAGTGTAGATTTCTGACACAAGACTTGAATGTATGCAACATTTCCCACCAGTGTTAGCAGGCCCTAGAAAACTTGTGACTTATTTATCAGGGAACACAGGAAATCAACTTATTTTGAATAACACTACTATGGATTCTCTAAGTCCTGAATCTAAGTCATAGAATTGTTGCCATCTCTCCGTCTCCTCTTGGTTCTCTGGATACATTCAATAATGGTGCCAACTGCTCCAGGAAGCTGGATGTCTATGAATTCTATCCGTCTAGACAAGGAGCAGAAACATTGTCTTGTAGCCCAGTGACCCACCATCTTTAAATTTCTCATGTCTTCCCTCTTAACTTTCTTTTAGGTTTTTAAATAATGACCCACCTTTTGTTTTCATTGTCCACTGGCAACGTTTCTTCTTCTCTGAAGTTTTAATTCCAAAGAAATGGCTTTTGTGGTCCTGACTTACGCCTAGATCAGAGTTGTATCCCCTCCACACAAAATAGAGAGCCACCTCTGTTAAAACTAGGATTTTACTCATCCAGTGAAAATACATAATGAACAGTCAGCAAAGTGAGTCTGTTCTTTTTACTCCACCCTCAAGCTGCCTGTGAGTCTACTTCCCATCATAGGAACTGCCGTTTTCAGGTTCAAATTTTGCTTGGGCACGTTTAGCTGCTTTTGCTCAAAGAACTGAGTCAGTGAAATACAGAAAATATGTCTCTGATCGCATCTCCCCGTTTCTTCAACTTGTATTTAAATTTCTAAAATATTCCACACAGGATGAATTCATGCAGAAGAATTGGACTTTGGCTAACACCCTTTCCACGTTGATCTCTTTGGTTTAGATTTTCGATTTCTAGTAAAAGGTAAGTGATTTCTAAATGCCTCCCTGCCTCTTCTACAGTCAGGGTTTCTTTTTATCATGAGTTTGCAGATGACGAGACAGTTTCGAATTTAGACTGAACGCTTTTCCACATTGATCACATACAAAGGGCTTCTCTCCAGTATGGATTTTCATGTGCTTACTAAGATTTGAACTATGGTTAAAAGCCTTTTGACATTCACTACATTTATAAGGTTTCTCTTCAGTATGAATTTTTTTATGTCGGTTAAGGTCAGAGTAATAGCGAAAGGTCTTTTCACATCCGTCGCATGAAAAGGGCGTCTCTGGCCTCTCTTCAGAATGACTTTTCTGGTGTCTAATAACATTTGACTGATGTTTAAAGGTTTTTTCACAAACATTACACTTGTAGGGTCTCTCTCCAGTATGGGTTCTTCGATGTCGCGTTAGATCTGAAAAACAGACAAAGGTCTTTTTACAATTATCACAGCTGTAAAGTTTCTCCCCAGTGTGGATTTGTTTATGACGCTTAAGATCTACGAGCTGGGTAAAGGTCTTCTCACATTCATTACATGAAAAGGGCTTCTCTCCAGTATGAATTTTCTGATGCTTGTTAAGATTCGATTGGCTTTTAAAGGATTTTTCACAATCATTACATTTGTAGGGTCTCTCTCCAGAGTGAACTCTTTGATGTAAGAGAAACTGTGAATATGGGTTGAAGTCCTTTTTGCAGTGATTACATGTGTAATATTTCTTTCTAGTATGAGTTTTTTGGTGTTGAATTTTTTCTGAGAAACTGTGAAAGGCCCTTCCACAAAACCTACAGACAAAGAGTTTCTTTTGTGTGGGAGTTCTTTGATGCTGAGTCAGCTGTGGTCTCTGGCCAGCATGAAATTTCTGATGAGTAATCAGGGATGAAAGAAACCGGAAGGCCCTCTGACACACGTCACACTTGTGTGGTTTCAGTCCGCTGTGTGTGCTCTGATGTTGAATGAACTTTGAAGCTCTGTTAAAGGTTTTGCCACACTGGTCACATTCAAGGTGTGTATCCAGAGTATCGATTCTTTGGCACCTTGGAAACGATGCTCGATGCCTGAAGGCCTTTGTCTCTTCATCATCTCCGGGGGCTTTCTCTACCTGGTGAATTCGCTGGTGTTCAGCACGTTGCGAGCTATAACTAAACACCATGCTGCAGTCGTCACGTCACCTCTTTCTCCAGCATCCAGGGCTCCTTCCCTTGCCTCAAAGAGGACATCACTTCTGCTTTGTAAGCCCAGCGTCCTAAG TCONS_00046299 s 3' 13966 TCONS_00046299 s 3' 6728 EMBV3_17590 TTGACACTGAAACTGATGGCTACTTCTCTGATGGGGAGATGAGCGACTCAGATGTGGAGG Gene GeneID:512319|PHF15:XR_084709:52_cdna Constitutive 0 NULL GeneID:512319 7 PSEUDO PHF15 NULL PHD finger protein 15 EMBV3_42526 GCAGGAGAAACGTTTCTATTCCTTTTCTGAGGCAGGCTTCCCAGCAGTTGTTCTCAAAGG Gene GeneID:509032|ANKMY2:NM_001075384:20_cdna Constitutive 2 NULL GeneID:509032 4 GENE ANKMY2 MGC140747 ankyrin repeat and MYND domain containing 2 EMBV3_04632 GGAGGCCCCATCCCTCCGGGTTTCTTTCAGCCTTTTATGTCACCACGATACGCAGGCGGC Variant GeneID:530184|SSBP3:NM_001104986:76_cdna 498^578 2 EMBV3_19773 GeneID:530184 3 GENE SSBP3 MGC166241 single stranded DNA binding protein 3 EMBV3_04366 TCCTTCAGCAAGTGTTTGTGGTGGATTATGTGAAGTATGGGATGCACCAGAATACACTTC Variant GeneID:509871|NMD3:NM_001075420:121_cdna 538^663 3 EMBV3_25929 GeneID:509871 1 GENE NMD3 MGC142487 NMD3 homolog (S. cerevisiae) EMBV3_27917 CAGTGCGTTTCGCTACCTCACTCGGAGCAGGTCGTTTCGGCAGCCAAGGTGTGTGGAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06673 AGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTTCCATTTATGCGAAATCTGTGGTTG Gene GeneID:509827|ATF2:XM_002685316:163_cdna Constitutive 5 NULL GeneID:509827 2 GENE ATF2 CREB2 MGC142504 activating transcription factor 2 EMBV3_08415 TTCCCGCCCCCCAGTAGGTTAGAAGCCTGAGATAAGAGGTCTCCATCAGTTCCAGTAGAT Gene GeneID:777601|LOC777601:NM_001078148:40_cdna Constitutive 0 NULL GeneID:777601 X GENE LOC777601 MGC142411 hypothetical protein LOC777601 EMBV3_04526 GAAGAGCACAGGGTCTGGTTGATCCACTTAGGGCTCTCTTTGCCATTTCCCCTGCATTAA Gene GeneID:407154|GJB2:NM_001083637:11_cdna Constitutive 1 NULL GeneID:407154 12 GENE GJB2 CX26 gap junction protein, beta 2, 26kDa EMBV3_17333 GGTACGTAACAGCGTCACCAGTCCCAAGAAGAGGCTCCATCGCTATTTTACTCAAAATCG Gene BVT0101_005103 + 0 NULL GK000010.2:12710299-12720523 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012630 TCONS_00012632 TCONS_00012631 TCONS_00016056 TCONS_00012628 TCONS_00012627 2 XLOC_007901 XLOC_008616 Coding TCONS_00012632 XLOC_007901 Coding Coding RAB11A 10:12695949-12715936 j TSS9548 6435 3 TCONS_00012632_4 117 0.121678321678322 5 0.678274792354648 0.00767193823972667 0.00618925204677392 0.00635768183882464 0.00435241410261459 0.0063836746630531 0.00199908953847524 0.00467848323639409 0.00544970871238172 0.0108390688406269 0.000432424476031612 0.00028634366427998 6.06746299396184e-09 0.00041814917469724 0.00218100057539483 0.000209989545304086 0.00338796483474406 1.39255294793681e-07 0.00748346359184199 0.00692288851667529 0.00610527695036869 0.00199561117267457 0.00180470305407174 0.000970239433979032 0.00412192709496857 0.00357735538173478 0.00443655614623233 6.59220026694332e-05 0.000624083371891034 0.000183243625790166 0.000290129475958053 XM_005211347.1 RAB11A PREDICTED: Bos taurus RAB11A, member RAS oncogene family (RAB11A), 0.0 3983 99.91 0.343745143745144 NM_004663.4 RAB11A Homo sapiens RAB11A, member RAS oncogene family (RAB11A), 0.0 3586 88.44 0.438383838383838 TCONS_00012632_1 sp|P62491|RB11A_HUMAN RB11A_HUMAN Ras-related protein Rab-11A; 1e-67 206 100.00 0.989690721649485 1 coding 0 1 0 0 2.57767373688606 0.00696884857006054 -0.121696904789448 0.0557266013611037 CCCTACTAATTGTTCTTATTGGAGATTCTGGTGTTGGAAAGAGTAATCTCCTGTCTCGATTTACTCGAAATGAGTTTAATCTTGAAAGCAAGAGCACCATTGGAGTAGAGTTTGCAACAAGAAGCATCCAGGTTGATGGGAAAACAATAAAGGCACAGATATGGGACACGGCAGGGCAAGAACGATACCGCGCTATAACATCAGCATACTATCGTGGAGCTGTAGGTGCCTTATTGGTTTATGACATTGCTAAACATCTCACATATGAAAATGTAGAGCGATGGCTGAAAGAACTAAGAGATCACGCTGATAGTAACATTGTTATCATGCTTGTGGGCAATAAGAGTGATTTGCGCCATCTCAGGGCAGTTCCTACAGATGAAGCAAGAGCTTTTGCAGAAAAAAATGGTTTGTCATTCATTGAGACATCTGCTCTAGACTCTACAAATGTGGAAGCTGCTTTTCAGACAATCTTGACAGAGATATACCGCATTGTTTCTCAGAAGCAAATGTCAGACAGACGTGAAAATGACATGTCTCCAAGCAACAACGTGGTTCCTATTCATGTTCCACCAACCACTGAAAACAAGCCAAAGGTGCAGTGCTGTCAGAACATATAAGGCGTTTCTCTTCTCCCCTAGAAGGCTGTGTATAGTCCAATTCCCAGGTCTGAGATTTAAATATATTTGTAATTCTTGTGGTCATTTTTGTGTTTTATTACTTCCTCATACTTATGAATTTTTCCATGTCTCAAGTCTTTTGATTTTAGCTTTATAAAATCATCCATTTGTCCCGAATGACTGCAGCTTTTTTTCATGCTATGGCTTCACTAGCCTTAGTTTAATAAACTGAATGTTTGGATTCCTCAATTATTGTTTACTTTTCATCATGGAAGCTGTCACTGTAGGACATAATAGAACTTGATCCCTTGAAGCTCAGACCTGTTGGTCTTGATTAAATCAAATTAAGAAGACTGTAGAAATAAGCTATCATTTTGCCACAGAGCAGCTTATAATTAACACTCTTCTCTCAGTGCAGAGTATATTTCCATAAATCTAAGAATTGCCCTATAAACATAGTAGAATTTTGAGAGCTTATAAATTTTCCATTATTCTGGAAGTCAATTTCTAAAATGCCTTAATAGGATTATGTAGTTTAGTAAATTTTGTTTTTTAATTTTTGTAAACATCAAAGTTGATTAGAGAGGGGGGAACACTTTTTTCTCGACAAGAATTATCTTAATAAACACAAAAGACTGTGATGATTTCAGTAGTAGCATGGTTATGGGGCCATAAGTCACACAGTGCTGCCTGGCAGGCTGGGAACCGGAGAGACTGGTGGAATTCCATCTGAGGTGCCTTTGTTACAGTGATCAGGCAGCCCAAGTCATTTAACTTCTCTAATTTCCCAGCAGTATATTATGTGGCATTTTATTGCTCAGGCAATAACTGGTTTAATGCGCTTAGTCTCTGATGGCAAAGTGTTAATTTTGTCTTAAAACCTTCCAGTAAATGCAACCTAGTTTTATCACCATAGCCACCAGCAGGCATGGATAATTATTTTAACAATGCTGATTTTTGAGTTTTGTAGTATATTATGGAATATAGTCCAGTTAAATATCTGGTTTCAGTATGTTAAAGAATACAAGAGAGGTTAATTTCTGCTCAAGTGGTACCACTTAAAAGGCATGTATTCTTTTAGTATATAGATGAAATAGTACCTTGAGTTTAAATAGAATGCATTAGGCATTGTACAAACCTGAAAGTTTTCTTCCACTACATTATTGAAATCAATGGAGCAACTCATTTTTCATTCTGAAATGTGCACACTAATATTTAGTTTTATTTTTTTGTGAATAATATTAAGCACTTAACTCTGAAGTGTTCTGAAAGTTGTGTCAACTAAAGTGATACGATTCAGGATGGTGGAATATCCCCAAAATATACATGTGTGTGGGCTTGCCTAGATTACTATGTTTCATAGTTAATCTGTCTTTTGCGGTGCTCATGACGTGTGGGGCACACGGAAGGCATTGCTGTGGTCAGTCTACTTAGTTTTCCTCTGTAGCCCTTTTATTATTTTGGTGTATTAGTTATGAAGATACTACTATCTCCTTGTAAATCGCTACTTTGTATTTTATGCATGCTCTGTAACTTGATTTTTTTTTTTTTAAGTTACTGATTTGGAATATATTCACATTCTAATAAACAGTTATAGGGGGACTATTCTTTATGTTGTCAGATTATATTTTTCCTTTGAGTGCTTTGGATGTAGCCATGAAATATTTGCTTCTGATGATAAGAGCATAGGTCCTTGGATAACAGAGTAAACTACTGAATTGGAGGCATCATTATGTGAATTCAGCTTTGATTTTAGACATAGAGTTCAATTATTCTTGGAAAAAGTATTACCAAAAGCATCAGGAAAGTAATCTCTGTACTTTGGTACGTAACAGCGTCACCAGTCCCAAGAAGAGGCTCCATCGCTATTTTACTCAAAATCGATAGTTAAGTTTTTACAAAATTCTTTAAGAGGAGAGACTAGATAGTGAATTGAAAATGAATAAAGTAACTTTGAATTTTTACCAAGTGTAGAGTTAATGTTGCCTTGGGCATGATTGGATCTTGGGAGAATTCCAGGAAACCTTAAGCAGTATTAGAAAATGAATTTTATGGCATTTCAACAAGTATCTTCATTCTAAACAGTATCTCAGGAGACGGACTGTCTCAAGAAACATTAAGTTTTTAAATATTATGACAATTTAGGGCTCAAGGCAGTTGAGAAGTATTTTGCTTTTGGACCTAGCTTTTCATTTACTTAACTTTGAATTTCTAAAAACCTGTTTTATTGTCCTGAAAAGTCACTTAGCCATCTTGACTTTATTTAAACTTGTATGTCGTCATTCTGAAAATGCTACTTATGATTTCTGTCCAGTAGTAGTAATTATTCAGTATGGGTGAATTTCTTTAGCCGTTACATTGAGAAGACTAAATTCTAATTCTCAGAAGGGGTGCCAGTTGGTGACTTAGGCCAAAGGGTTCTGCAGGTAGACAAGAATCTTAAAGAGTTGGGATTGCCCATTAAAGCTAGTCATGTTTATTTCGTCATTGGGGAAATAGACATCCTAATATTTGTCAGTGATTTGTACTTAACAGAATGCAAATGCTCTCAGTGGTTTGAGCTATTGTGATCATCTCTTCTATCTAGAAAAAGAAAAGCTCTATTATTCAGATAGTTTTGGCCAACATCGGAGCAGAATGATTCAAAGGTTAGGTGGATAATTTAGAACTTAATTTCAACCTGTTAAATTTCAATTTCTGGAGTTTTGGTTTTTTTTTTAAGGAAAAAAATGAAGACTGTATATTTGATGTCTCACAAACATCATAAGCCTGAGAAAAAAATTCAAAATACGAATTTTGCATGAGGACTGTGCATAAGGATATCTATTCCCTGTGTGGAAAAAAAGATGAACAAAACCTGTGCAAGGACCCTCTTTCACCGTTACATTTAGTGGGTTAGCATAGTCCAACTAGTGCCCCAAACCTGCTTTCTCTTCTCCTGTTTGGGTCAGTGCGGGAGCTGCCTTCCTTCCTGGGATTTGGCAGGTCAGCTTTTCCTCTCATCTGTACAATATGCCAAATTAACTGGAGTTGTCATTCTAATGTCTTAAATTGTAGGAGGCTGATGGTAACAATGAACTAATACAAAATGCTAATGTCATTCAGTTCAGTTCAGTTCAGTCACACAGTCGTGTCCAACTCTTTGTGAACCCATGAGCCACAGCACACCAGGCCTCCCTGTCCATCACCACCTCCTGGAATCCACCCAAACCTATGTCCATTGAGTCGGTGATGCCACCTAACCATCTCATCCTCTCTCGTCCCCTTCCCCTCCTGCCCTCAATCTTTCCCAGCATCAGTGTCTTTTCAAATGAGTCAGCTCTTCGCATGAGGTGGCCAAAGTATTGGAGTCTCAGCCTCAGCATCAGTCCTTCCAGTGAACACCTAGGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCCCCAACACCACAGTTCAAAAGCATCAATTCTTCGGCACTCAGCTTTCTTTATAGTCCAACTCTCACATCCATACATGACTACTGGAAAAACCACAGTCTTGACTACCATTTAAGTAAAGGAGACCATCAGGATTAGACTGAGAGAGAATTTTTATTGAAGTATCCATTTTCCTAAAAACCGAATTGGATAGAGAAAGAATATTTGAAAGGAAGTTGATACTAGGCATAAAATTAGAAAGTATGTTAAATCTGAGGTAAAAGGTTGAACATGGTAGGTATAATAGAGTGGGTGACAAAGCTTGGATATTAGCCACAGGTCTTCTAGTCATGTGTCTCTGAGCCTCACTTTCTCCAGGGGACTGGATTAGATCCTTTTGGAGGTGTATCCTAGCTTTAATTCAGTAATCCTATGAATGTACCCGTTTTTCAGGTACTAGAGCCAAATTACTATACATTCTAACTAAAATTTAATAGCTAAGTTAAAGTCAGGTGTACACTTTGCAAGATGTTTCTGGTCTTACAATAACTTGATTAAAATCCTATCTTTATTTCCATGTTAATGCCATTAAATAAGACGAAAGCTTTCAGAACATTTGCAGAATGACTGTTTCAACAATATGCATCAAAGTACCATATGTATTATGGGGAGAGAAACACTTGAGGGGCTGCTTTGTCAACTGTGAACTGAGAATTGCTTGTTTTTTGGGCTTTTACTGTTAAAATTCCGCTGGCTTTTAATATATACTTTGAAATATATTTGTGTTTGGGAGAGAGAACCTTTAAAAACTTTTGTGTTTAATTTTTTTAATTATTATTATCTCTAAGAAGAATCTAGTAAGGTAGATGAGTTCCTGGACTGAATCCAATAGAAGCAATGATTAAATCCAAGTGTATAGGTTTGTGTATTCACACACATGATATAAATGGCATTATTTGGCTATTAGTTAAGTAATGTAATTATTAGTAGTCTCCACATTGGAATTGAATTATTTAACATAATTGAGCATAGAATTGATAGGTCCTGGCACAGATGTCATGTGTATTGGCTGTTAACTACTCTATTATTAGTACCAGTGATGGTGGTGAAAATACCCAACAGGATTCCTTTCCTGTGTTTGAGTCAATGTAACTTAACTTTGCCTCAGACCACAAAATCTCAGACCATGTTATCCCCATCCAAATGAGCAAGATTACTGCTTTCAGCACTCATTCCCAAGGCTCTGCAGGGCTATCTACTAGGCTAAACAGCGCCCTTGGAGGAAAGCTAGAAGGAAGGAAATACATAGTCACCACCCTACTGAATCATCATGGCCCTCTATTTATCCCTGCTATATTGTAAGATCCACAAAAGTAGGGAAGGTGCTTTGTTCATACTGATACTCCTAATGTTTATCTCTCCTACAACCCTGTGTTGAAACAATAAAGAAGGAGCATGGGAAAGAGTGAAGGGCCAAATCCTAGGGTTCATTCTAGTTTAGCTTGGGAGCTGTAGTCTGAGAATTACCATTTAGATTAAGCATCTTTAAAAAATTTTATATAAAATTACCACATAAATAATATATAGTAATTGTTACATTGTGCTCAGTCTGATTCTTTGTGCTCCCATGGATGGTAGCCCACCAGGCTCCTCTGTCCAAGGGATTTCCCAGGCAAGAACACTGAAGTGGGTTGCCATTTCCTTCACCAGGGGATCTTCCCAATCCAGGGATTGTACCCGCATTCCCTGTATTGGCGGGAGGATTCTATACCACTGAGCCACCTGGGAAGCCCTAATAATTATTATATGCAAGTATAAATAATAGTATGATGAATCCTTTATGTATCTATCATCCACCCGTTCTGAGATTTTCCATCTTCTGTTGCCATATACAGATGAATTGGGCCTCTTCTGTCTCTCCTCTGGCTTCATGAGTGGCTAGTAGCATCATTCTAGAATCTTCTGTATTGAATGCACAGCTTGTAGTGATTAAGTACACAACCTGCTGCCTTTATCATTTATTGCTATCATTTATGGTATTCGGTGGTATTCTGAGTCTTAAAGTCATAGACTTAAAACACTATTATTCTTAGTAAATACCTTTTTTAGCCTTACAACTATTGATTATGTATTATGTTTCACTTAGATGCCAAAGCCCCAGCCTCCCTGTTCTGAGGATTGTCTGTTATATCTTTTCTGAATGAGTCTTAATCTCTAAATTGCAAAAATACGTTATTTTTGGTTCAGTTCAGTTCAGTCACTCAGTCGTATCTGACTCTTTGCCACCCCTCTATAAATCACAGCACGCCACGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAAACATGTCCGTCGAGTCGGTGATGCCATCCAGCCAT EMBV3_22179 GTTCATACCACTTCCGGTGGAAGCATGGATTAATGGGATCGTGGACAAGGGTAACCGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26472 TTGAGTTAACACCTCTGCCGCTGCTAAAAGGTATCTTGCAATATATTCAGAACTCTTCCT Variant GeneID:533617|PPP2R5E:NM_001083468:157_cdna 686^882 1 EMBV3_25643 GeneID:533617 10 GENE PPP2R5E MGC143207 protein phosphatase 2, regulatory subunit B', epsilon isoform EMBV3_34946 AATCACCAAGGAGGTGCTTTGCCTAGTCTGTTGTATGTCTGTGGAGCATGGGGCTCACAC Gene BVT0102_402330 + 0 NULL GK000029.2:5784683-5812011 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162954 TCONS_00162955 1 XLOC_099778 Coding TCONS_00162954 XLOC_099778 Coding Coding LOC100848286 29:5786688-5799361 j TSS122251 1318 1 TCONS_00162954_5 323 5 0.896385732323232 0 0 0 0 0 0 0 9.87265477796992e-05 0.000245432674909139 0.00296848597678464 0.00132799335380913 0.00122129041703769 0.00842709873160719 0.0227530323355519 0.0139244288905519 4.91950594070313e-08 0 4.5715903402159e-08 0 0 0 0 0.000146112928639469 0.00015263500121882 0 0 0 0.000480246368559734 1.01929256726951e-08 1.22381798435617e-08 XM_598264.5 LOC520034 PREDICTED: Bos taurus tripartite motif containing 64-like (LOC520034), mRNA. 4e-20 104 70.74 0.163884673748103 NM_001164464.1 TRIM43B Homo sapiens tripartite motif containing 43B (TRIM43B), mRNA. 1e-39 168 68.68 0.33763277693475 TCONS_00162954_5 sp|Q96BQ3|TRI43_HUMAN TRI43_HUMAN Tripartite motif-containing protein 43; 8e-48 169 48.47 0.501547987616099 2 noncoding 0 0 0 0 0.0567073020167558 0.590966013667528 0.0394006052385111 0.457330892867954 ATTCATTTATTTTAAAAACAACATTTCCGGAGATTAAAAATATGAATTTAGGGCATAGCTATTTTACTATAGATTGGATTGTGGCAATTGGATTAAGTAGGTTTCAGAGGTTTCACTTCAGTCAATGGTGTTAGGGTGTGTTTTCAACTCTTCCAAAAGCTCATCATGTGCACCTTTCCACAGGTTTGATAACCCTGTCACTGGGAGGAAGTGGGCATGGTCTTTGGGGAATATATAAAGCATCCAGCAAAGAGCTCAGCTGATTCTTCTCCAGAGCCCAGAGCTGTTGTGTTTGGAGGTGGCTGGGTGGTGAAGACTTTTGAAAGTTACCACTACCAGGAGAAACATGAGTTCCAAAAGCCTCCGGAATGAAGTCACCTGTTCCCTGTGTGTGAAGTATTTCATAGACCTGGTCACGCTGGGCTGTGGGCACAGCTTCTGCATGCCGTGTCTCTGTCTCTACTGGGAGGAAGGCCAATGGCCTCCTCGCTGCCCTGTGTGCAGGGAAACACCCCATCAACTGAGCCTGAAAACCAATATCATTTTGAAGACTCGAGTATTCCTTGCCAGACGGACAGGACCCTACGATGTACCTAGGTCTGCAGAAAAGATGTGTGAGCTTCACGGGAAAACAAAGAACTTGTTCTGTGAAATCACCAAGGAGGTGCTTTGCCTAGTCTGTTGTATGTCTGTGGAGCATGGGGCTCACACGCATTGCTCTGTTGAGTGGACGGCTGAGGAATACCGGCAAAGGCTTCTGAAGATAATGAGGTCTGTGTGGGAAAAGATACAAGAAAATAAAAGAAATTTGAACAGAGAAACAAACAAAATAAGAACATGGGAGACTGTTCATGAAGTGGCTCTAGAGAGACAGTCCCTAGCAGAGCCCTTGGGCCAGACCTCCATGAGGACTGCGCCTTGTCCTCCCATCTCGGGAGAACGTGGCTCCGAGAGGCTCTCTCTGCTCCTCAGCCCCAGAAACCCGCAGCCCCACAGCCCTGTCTCCCCAGATCCTTCTCCACCACCTGCAGGGCCACCTCCAGCTGTTCCTGAAGCACAGCGGCTCTGTGGAGGGTGTGGTTCTACTTCTCTCCAGGCTGAGAAGAGCCTAGGAGCCCTCCATATCTGGAGCAATGTCTCCTTCTCCAGTCCACAGGTGTTCAGACTGGGGATCTCCAGGCCAGGGCACTCACCGCCGCCTTCTTCAGCCGAGGAAGGAGGCAGAGCCCAGAAGCCCACTGTTACAGCCGCAGCTTCTCTGGTGTTCAAGGCTCATCAAGGCTCATGTGGACAAGGACTCTCCAGTGCTTGCCTGTGA EMBV3_31475 ACTTCTTGGACCTCCTCAGTGTGTTTAGTGACACAGCCACCCCAGACATCAAGTCCCACT Gene GeneID:510141|CIB1:NM_001075433:102_cdna Constitutive 1 NULL GeneID:510141 21 GENE CIB1 MGC140635 calcium and integrin binding 1 (calmyrin) EMBV3_01922 CAAGAGCTCTAAAAACACAGCTATCTCAAGCTGAAGTACATAAAGTCTCAAGACCAGAAA Variant GeneID:538838|LSM14A:NM_001034654:703_cdna 628^804 1 EMBV3_34463 GeneID:538838 18 GENE LSM14A MGC129061 LSM14A, SCD6 homolog A (S. cerevisiae) EMBV3_02879 TGGACTTCCATTACTCGCTGGCTACGCAGGTGCCGACTTTTGAGATCACGTCCCCCAACT Gene GeneID:783452|LOC783452:XR_083718:53_cdna Constitutive 0 NULL GeneID:783452 7 PSEUDO LOC783452 NULL similar to neuregulin 2 EMBV3_27702 TCCAATCTTATTTTGTCTCTTGGAGATTGTTGAACGCAGCTTGTCTAGGAAGGGGATGGG Gene BVV0102_136562 + 0 NULL GK000030.2:107579764-107678776 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247880 TCONS_00253110 TCONS_00247877 TCONS_00247881 TCONS_00247876 TCONS_00247882 TCONS_00247879 2 XLOC_151450 XLOC_156051 Coding TCONS_00247879 XLOC_151450 Coding Coding DDX3X X:107675965-107691832 j TSS185515 4767 1 TCONS_00247879_2 470 0.0755191944619257 14 0.700428589436531 0.011225059617693 0.00397316219792284 0.00768745959691787 0.00465413001874433 0.00517830328672988 0.00521895968585372 0.00584569103134808 0.00522948248663116 0.00845991754290811 0.0031598346652286 0.00134176176634708 0.000841146777578303 0.00102828446617998 0.002998751164176 0.0019392173391789 0.00859753110092502 0.00796900140760692 0.0040601760401057 0.00609176639120239 0.00680174137077735 0.0028875837158391 0.0069562085080205 0.00244954773752909 0.00385098664027697 0.00987302353149064 0.00574862516906009 0.00667004284068771 0.00199624028333339 0.00078843216137425 0.00192484062009249 XM_005228285.1 DDX3X PREDICTED: Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), transcript variant X1, mRNA. 0.0 4901 100.00 0.569750367107195 XM_005272590.1 DDX3X PREDICTED: Homo sapiens DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked (DDX3X), transcript variant X1, mRNA. 0.0 4491 96.78 0.569750367107195 TCONS_00247879_2 sp|O00571|DDX3X_HUMAN DDX3X_HUMAN ATP-dependent RNA helicase DDX3X; 0.0 850 98.80 0.885106382978723 1 coding 0 1 1 1 0.300353717155944 0.219142735269938 0.362114027509005 0.0090149572020092 TTCAGAGCCGCAGTTCTCCCGTGAGAGGGCCTTCGCGGTGAACCCAACACATTAGCTCAGCAGCGGAAGACTCCGAGTTCTCGGTACTCTTCAGGGATGAGTCATGTGGCGGTGGAAAATGCGCTCGGGCTGGACCAGCAGTTTGCTGGCCTAGACCTGAACTCTTCAGATAATCAGAGTGGAGGAAGTACAGCCAGCAAAGGGCGCTATATTCCTCCTCACTTAAGGAACAGAGAAGCTACTAAAGGATTCTATGATAAAGACAGTTCAGGGTGGAGTTCTAGTAAAGATAAGGATGCATACAGCAGTTTTGGTTCCCGTAGTGATTCAAGAGGAAAGTCTAGTTTCTTCAGTGATCGTGGAAGTGGATCAAGGGGAAGGTTTGATGATCGTGGACGAGGTGACTATGATGGCATTGGCGGCCGTGGTGACAGAGGTGGTTTTGGCAAATACGAACGTGGAAATAGCCGCTGGTGTGACAAATCAGATGAAGATGATTGGTCAAAACCACTCCCACCAAGTGAACGCTTGGAACAAGAACTCTTTTCTGGAGGCAACACTGGGATTAACTTTGAAAAATATGATGACATTCCAGTTGAGGCAACAGGCAACAACTGTCCTCCACACATTGAAAGTTTCAGTGATGTTGAGATGGGAGAAATTATTATGGGAAACATTGAGCTTACTCGTTACACTCGCCCAACTCCAGTGCAAAAGCATGCTATTCCTATTATCAAAGAGAAGAGAGACTTGATGGCCTGTGCCCAAACAGGGTCTGGAAAAACTGCAGCATTTCTCTTGCCCATCTTGAGTCAGATTTATTCTGATGGTCCCGGTGAGGCTCTGAGGGCCATGAAGGAAAATGGAAGATATGGGCGCCGCAAACAATACCCAATCTCTTTGGTGTTAGCACCAACTAGAGAATTGGCCGTACAGATCTATGAGGAAGCCAGGAAATTTTCATACCGATCTAGAGTTCGTCCTTGTGTGGTTTATGGTGGTGCTGATATTGGTCAGCAAATTCGAGACTTAGAACGTGGATGCCATTTATTAGTTGCGACTCCAGGACGTCTAGTGGATATGATGGAAAGAGGAAAAATTGGATTAGACTTCTGCAAGTACTTGGTGTTAGATGAAGCCGATCGGATGTTGGATATGGGGTTTGAACCTCAGATACGTAGAATCGTTGAACAAGATACTATGCCACCAAAGGGAGTTCGCCACACTATGATGTTTAGTGCTACTTTCCCTAAGGAAATACAGATGCTTGCTCGTGACTTCTTGGATGAATATATCTTTTTGGCCGTAGGAAGAGTTGGCTCTACCTCTGAGAACATAACACAGAAAAGTTCCAGCTTCAGCAGCAGCCGCGCCAGCAGCAGCCGCAGTGGTGGAGGTGGCCATGGAAGCAGCAGAGGGTTTGGTGGAGGTGGCTATGGAAGCTTTTACAACAGTGATGGATATGGAGGAAATTATAACTCCCAGGGGGTTGACTGGTGGGGTAACTGAACCTGCTTTGCAGTAGGTCACCCTGCCAAACAAGCTAATATGGAAACCACATGTAACTTAGCCAGACTATACCTTGTGTAGCTTCAAGAACTCGCAGTACATTACCAGCTGTGATTCTCCACTGAAATTTTTTTTTTAAGGGAGCTCAAGGTCACATGAAGAGTCGAAAGGAACAATCAGCAGCCCTGTTCAGAAGGTGGTTTGAAGATTTCATTGCTGTAGTTTGGATTAACTCCCCTCCCAACCCCCATCCCAAACTGCATTTATAATTTGTGACTGAGGATCATTTGTTTGTTAATGTACTGTGCCTTTAACTTTAGACAACTTTTTATTTTGATGTCCTGTTGGCTCAGTAATGCTCAAGATACCAATTGTTTTTGACAAAATAAATTTACTGAACTTGGGCTAAAATCAAACCTTGGCACACAGGTGTGATACAACTTAACAGGAATCATCGATTCATCCATAAATATTATAAGGAAAAAACTTATGCAGTAGCCTGCATTAGGGCTTTTTGATACTTGCAGATTGGGGGAAAACAACAAATGTCTTTGAAGCATATTAATGGAATTAGTTTCTAATGTGGCAAACTGTATTAAGTTAAAGTTCTGATTTGCTCACTCTATCCTGGATAGGTATTTAGAACCTGATAGTCTTTAAACAAGCCATTCCAGTCATGATGAGGTGATGTATGAATACATGCATACATTCAAAGCACTGTTTTCAAAGTTAATGCAAGTAAATACAGCAATTCCTCTTTCAGTGTTTAGGCAGATCATTAATTATGAGCTAGCCAAATGTGGGCATACTATTACAGGGAAAGTTTAAAGGTCTGATAACTTGAGATAGGGTTTTAGGAGAATTCATCTACTTAGACTTTTTAAATGCCTGCCATAAGTGAAATTGAAATGGTAGAATGGCTGACCACAGCAATGACCAGCCCTCATTAGGGCCCTGGATGATTTTTGGTCTAATAACGCATGCTAGTGTTGATGTTTTTTGGTCAAGAGGGTATGAACAGGAAGAATTAAATGCAGCAGGCTTTCTTTTAAATGCCGATTCATATTACTCTGTTCAAGCTGCGTTGAGATGTTAAACTGGCTTACTATAGACTTTGTAAAAACGGCTCCAGAAGAGTAACAAACTGAAATCTTTGAGATCACACAGGTTGGAAATATGTACATAACTGCACAAGGTGTCAATTCTGCTACACAGTGCAGTTTTAGTCAGTTTTAGTTGCATAGGTTTCCATTGTATTTATAGTCTGTTTATGCTAAATCTGGCCAAAGATGAGCATTGTCCACCACTAAAATGCCTCTGCCACTTTTGAATTCTGTGCTAATTTTGTGGCCAGAATGCGGTGATCAAAATGCTCAATCTTTTTACAGTGGCATAGGAAGATGGCAAAAATTTCCTAAAGTGCAATAGATTTTCAAGTGTATTGTGCCTTGTTCTAAAACTTTTATTAAGTAGGTGCACTTGACAGTATTGAGGTCATTTGTTATGGTGCTATTTCAATTAGTCTAGGTTTAGGCCCTTGTACATTTTGCCCATAACTTTTTACAAAGTACTTCTTTTATTGCACATTCAGAGAATTTTATATATATGTCTTGTGTGCGTGTCCTTAAACTTCCAATCTTATTTTGTCTCTTGGAGATTGTTGAACGCAGCTTGTCTAGGAAGGGGATGGGACTAGATTCTAAAATTTATTTGGGACCATGGGAATGATAGTTGGGAAGAAAACTATTTGCACACGACAGATTTCTAGATACTTTTTGCTGCTAGTTTTATGTAATATTTATTGAACATTTTGACAAATATTTATTTTTGTAAGCCTAAAAGTGATTCTTTGAAAGTTTAAAGAAACTTGACCAAAAGACAGTACAAAAACACTGGCACTTGAATGTTGAATGTCACCGTATGCGTGAAATTATATATTTCGGGGTAGTGTGAGCTTTTAATGTTAAGTCATATTAAACTCTTAAGTCAAATTAAGCAGACCCGGCATTGGCAGTGTAGCCATAACTTTCTGATGTTAGTAAAAACAAAATTGGCGACTTTAAATTAAATCATGCCAAGGTTTTGATACACTCGTCTTAAGATATTAATGAAACACTTCAAAACACTGATACGAAGTGTCCATATTCAAATATTGTGTGTTTTTGTTTCGTTGTGTGTATTTTTTTTTTTCCAGTGAATGTCTGGCTCATTGCAATCCTGAAACATGTGGTTATCTTTGTTGTATTGGCATAATCAGTGACTTGTACATTCAGCGATAGCATTTGAGCAAGTTTTATCAGCAAGCAATATTTTCAGTTAATAAATAAGGTTTCAAAAATCATGTAAGAATGACGTTAAACTTGCTGAATGTAAAGATTGAACCTCAAGTCACTGTAGCTTTAGTAATTGCTTATTGTATTAGTTTAGATGCTAGCACTGCATGTGCTGTGCATATTCTGATTTTATTAAAATAAAAGTTGAACTGCACAGTCTCTTTTGTTGTTGTCAATTGTGGTTTATTATTAGGTGAAAATAAAGTTGTGGTCTTGCCTGAAGAGTTGTAAGATGTAATTTTTTGGGGTTGCCATCCAGTGCTGATTTTGAAATAACTCTTGGATACAGAATTACCCTGCTTTGTTAATAAAAGATGAAGATGGTGTTAGTTTGGAATACAGTGAAAAAATGGATTTTTGTAATAGATGGAAATCCAAAAAATCCTTGTTGATGTATAGTTTATGATTATAGTTTGAAATTTATGGATGGAGGGGTGGAAACTATTCTTGGAAGCACTTGATACATAGGATGATTGAACAGTGCAGTAATGAATTGGTTTTAAAAATGCATTAGTAATATGTGCAATAAATACTTACAGATCAAGAATGTTATTTGGGGTTGGGGTCATCAGTTCAGTCGCTCAGTTGTGTCCGACTCTGCGACCCCATGGACTGTAGCACGCCAGTCCTCCCTGTCCATCACCAACCCCCGGAGTTTACTCGGACTCATGTCCACTGAGTCAGTGATGCCATCCAACCGTCGTCATCCTCCTACAATCTTTCCCAACATCGGTATTTGCCAATAAGTCAGTTCTTCGTATCAGGTGGCCAAAGTATTGGGAGTTTCAGCTTCACCGTCAGTCCTTCCAATGAATATTCAGGACTGATTTCCTTTAGGATGGACTGGTTGGATCTCTTTGCAGTCTAAGGGACTCTGACTCTTCCCCAACGCCACAGTTCAAAAGCATCAATTCTTTGGTGGTCA EMBV3_22243 CGTCTGTACATATCTTTGTAGGGTGACTCCCCAGTGATCCATGCCCTTCAGTTGTATGAC Gene BVT0102_249850 + 1 EMBV3_28186 GK000001.2:46493029-46543486 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14444 GAAGACGGTTTCGGAGAGCACCCCTTCTACCACTTCTTGGTGGCAGAGTGGAATGAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26815 GCTCATTGGGTACTGCACGGCCATTCTGTTCATGGTTGTGTTCTATCAGTTCTTCCACCC Gene GeneID:539621|XK:XM_002700227:200_cdna Constitutive 0 NULL GeneID:539621 X GENE XK NULL X-linked Kx blood group (McLeod syndrome) EMBV3_24314 GCTCTGCAGCACTGCCTTACCCGCTGAAGAAAGAGAATGGCAAAATCCTGTACGAGTGCA Gene GeneID:511122|ZNF683:XM_002685763:555_cdna Constitutive 0 NULL GeneID:511122 2 GENE ZNF683 NULL zinc finger protein 683 EMBV3_27938 CCGGCGGCGCCAGCAACATCAGAGCTACTCGTCCTTGGAGTCTCGAGGCTGAAACCACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43744 ACAGACAAAGGAGTCAGTGCCTTTGGACAGGAATGGAGAAGCCAGAGGTTATTGATGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23463 CTTCTGTGGAGGTGTTTGTATCTGCGGGATTTTCGAGATGGTAGTATCAGAGGTCGAGAC Gene GeneID:508235|FBXO7:NM_001038059:19_cdna UTR3_Alt 2 NULL GeneID:508235 5 GENE FBXO7 MGC134509 F-box protein 7 EMBV3_11392 AAGCGCCCCACCTGCGTGATAATGGTCAAGCCCCACATTCAGACATCTCTGTGGTCCCGA Variant GeneID:520891|NHP2:NM_001015626:26_cdna 421^566 1 EMBV3_09026 GeneID:520891 7 GENE NHP2 NOLA2 NHP2 ribonucleoprotein homolog (yeast) EMBV3_41786 GAAAATGTGGACGCGTCCCCTCCCGTCTTGAGGCCACTGAAGCCTCCTGAGGTGGCGGTA Gene BVV0102_057378 + 0 NULL GK000002.2:88455550-88809958 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13849 CTAAAACAAGCTGATCTTTACATTTCTGAGGCTGTTGTGGATTCTGTTTTGGCAGTTAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43236 GTGCGCTAACCTCACTGCCCCATGGCATTATTCATTCTCTCTGCCCAAGTTGCTCTGTCT Gene GeneID:785179|FKBP1B:NM_001098158:270_cdna Constitutive 0 NULL GeneID:785179 11 GENE FKBP1B FKBP12.6 FK506 binding protein 1B, 12.6 kDa EMBV3_23516 GAAGCCAAAACCCTGGTCCAAACGCTGGGAACGTCCAAAATTTAATGTTAAAGGGATCAG Gene GeneID:510957|MRPL19:NM_001046068:80_cdna Constitutive 1 NULL GeneID:510957 11 GENE MRPL19 MGC127718 mitochondrial ribosomal protein L19 EMBV3_30038 CCGGTCTCTGTGTCCCTGCTGTGTTCTCACCTGAACATCCCCACAGCTCATGAAGATCAT Gene GeneID:100270756|LOC100270756:NM_001145202:859_cdna UTR3_Alt 1 NULL GeneID:100270756 5 GENE LOC100270756 OCC-1 hypothetical protein LOC100270756 EMBV3_39812 GTGGGGAAGACATATGAGCTGCTCAACTGTGAACATTGCTTCCCGCCCGTCCTCAGTCGA Variant GeneID:515362|EMG1:XM_002687861:96_cdna 356^921 6 EMBV3_41949 GeneID:515362 5 GENE EMG1 MGC138092 EMG1 nucleolar protein homolog (S. cerevisiae) EMBV3_09962 AAGGATATTGCTCTTTGGATCAGCTTGTGTTCATGCTCCAGACTCTTGCATCCAGCCGCC Gene GeneID:281778|GCNT1:NM_177510:23_cdna Constitutive 0 NULL GeneID:281778 8 GENE GCNT1 NULL glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) EMBV3_31219 GGGCTGCTGGTCTTCCCCTACACACACCAGGATGATCCTCAGTGTCCTCACGGGCCTGCT Variant GeneID:506336|YIF1A:NM_001034269:521_cdna 516^808 4 EMBV3_23280 GeneID:506336 29 GENE YIF1A MGC127000 Yip1 interacting factor homolog A (S. cerevisiae) EMBV3_15148 TACAGAGTGTACTTTTGATATGGCCTCCACACAAGCCTCCTTCTTCACAGTCCTCCTGGG Gene BVT0102_055190 + 1 EMBV3_01566 GK000028.2:12978394-13050366 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17243 AGCTGCTTACCATCCTGAAGCACTAGCAGGTTGATGGAAATTATCACCTGGCCTCCAAAG Gene GeneID:514473|ATRX:XM_002699982:65_cdna UTR3_Alt 4 NULL GeneID:514473 X GENE ATRX NULL alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) EMBV3_34930 GAGGGGGAGGCCAGAGGACTCGGAGCAAGGAGTGGTGGTTCTGAGAAAAAAAGAAAATAT Gene GeneID:505740|ADCY5:XM_002684810:214_cdna Constitutive 0 NULL GeneID:505740 1 GENE ADCY5 NULL adenylate cyclase 5 EMBV3_34599 ATGGCCCCAGGCAATGAGGTTGAAGTAGGAAGAAGCCATATCCTTAAAGACCTAGGGGAG Gene BVV0102_099455 + 0 NULL GK000009.2:28696788-28811575 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16958 GAGCACCTTCAAAGACGTTGCCCCCATCTACCCTTGGCTGCTGACTTAATGGTAAGTTTA Gene BVV0102_088961 + 0 NULL GK000017.2:56017499-56021829 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06787 ATTTCATCCTTTTCTCAAGTGCACACGGAACCTTCTCAAGGATAGATCACATCCTGGGCC Gene BVV0102_084706 + 0 NULL GK000018.2:61273884-61286188 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249913 TCONS_00244654 TCONS_00198626 TCONS_00244651 3 XLOC_152856 XLOC_150512 XLOC_120280 Coding TCONS_00244651 XLOC_150512 Coding Coding - X:65562075-65598696 - TSS183822 4854 1 TCONS_00244651_13 227 0.859703337453647 2 0.867504096122337 0.000546324660909642 0.000757461584126478 3.92526494542853e-08 4.34005527731028e-10 0.000128280468969596 7.65960648283005e-09 0.000158443266785982 0.000150746959770378 0.00075718240675464 0.000552054762114272 0.00016583703633938 0.00016169775087356 2.02399104668376e-15 0.000431860274018204 0.000301960722937189 0.000147433214970324 2.28930770138559e-05 3.6878419654744e-05 1.4106219399969e-09 0.000250917789004325 0.000175522950960824 0.000173426330421786 4.54041665649982e-06 2.65484662270802e-05 0.000771314104096699 0.000312652042076938 5.11322194626496e-05 3.51940676892609e-05 1.66764236023422e-05 3.53164368735039e-05 XM_005216780.1 KCTD3 PREDICTED: Bos taurus potassium channel tetramerization domain containing 3 (KCTD3), transcript variant X1, mRNA. 3e-54 219 72.47 0.0811701689328389 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 4e-58 232 76.56 0.0686032138442522 TCONS_00244651_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 6e-79 260 54.59 0.955947136563877 0 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 AGCATATCTCCCTGAATTTTTTCTTATTAGCCAGAAAAACAAACAAACAACTCTGTACTTTTAAAGGGCTCATGCGATTTAGTCAGTACCATCCAGATAATCATCCTCTGTTAGGGTCAGCTGATTTGGGAATTAATTACTTCACAAATACCTTTACAGCAGTATTTAGGTGAGTGTTTCATTGAATAACTGAGAAAAGGTGGGTATGAACCAGTGACTGGGAATTCTGGAAGCTCATTTTAGAATTGGGCTGACCACAAGACCTCAGACCAGCTCCTCCACTGTTTCAGTGAGAATAAAATTAGGAGTACAAACTTTTGAGTCTACAGAAGAAGCCAATACCATTGGAGCTGGAGAAGGCCTACTTAGGAAGTGGACACACGACCTGTGGAAGGGACCCTGAAGTAAGGAAAAGTCAGCATTGCAAGGCATGTTGAAGATAATTGACAATAACCCTCCAGTTTTACCATTGAGGATACAGAGGCCCAGAGAGTGGAAGCCTTCTGGGAGTAGTCTTGCAGCCACCTCATGTTCCTTCTGCAGAATCTATTGACCATTGAAGGGCCGGCAGGTGGAACATTTGAAGTCTGGACTTTGGTATAAGCCTTCTTACTGGTGCCCATGAAATGAGTGCTGCAATCAAGTTTCCTAAATGATGTGACAGCCATCAAATACATGATCCATGGGGAGGAAAGATAAATGGCATTGAACATTCAAAGGAAAACTAGAAGGTGCCACATTGGACCTGGGTACTCTGATATTATTTCTGGGCTGTGCTCAGTTGCTCCAAGAGGCAAGAATACTTTTCCTTTCACTCTCTTCCCCACTTGAAACAGCATTTTTCTGCTGAGAAGAACCACAAAAGATAGAGATAGGAGAAACTGTCTTGCCTACTTTTTTCTTATTCAAAAAGTTATTTCCCCGAAATCTTAGAAACTGGGGAAGAGGAGGGAGGAGCTAAGATGGCAGAGGAATAGGATGGGGAGACCACTTTCTTCCCTACAAATTCATCAAAAGAACATTTAAATGCAGAGTAAATTCCACAGAACAACTTCTGACAGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTGTCTTCGAAAGGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGATGGATGGAGCTCCATCCCGGGAAGGGAGTCTTAAAAAGAGAGAAGTTTCCAAACACCAGGAAATACTCTCACTGCCAAGTTTGTGCCGAGCCTTGGAAGCACAGAGGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCCACAGATTATGAGCCCAATGGTGGCTCCCCCAGTGGAGAAGGAGCGCAGACGCCTGCACCCGCCACTAGCAAGCGCGGGCTGGGCAGGGAGGCTCAGGCTGCATTGCTTAGAGTAAGGATCTGGCCTGAATGCCCCGAGTGCTATCTGAGTGAACTAACTTGGGCTAGCAAACCAGACTGTGGGATAACTACCATGCGAAAAGCCAGCCCTAACCTAAGACACTGCCAGGCCCGTGCAGAACAAAGGACTGAACAGAGATAGCTGGCTGCAGACCATCCCCCTCCGGGGACAGGCAGCCAGAGCCGGAAGGGGGCAATCGCAGCCCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGGATCGTCAACATCCGCCTGAGAAGGTGCACCAGTTGTACACACAGAAAACCCAGCAGTGGGGAGGCGATAACTCGCAGCGGCTGCGCTCGCCAAACACCTCATCACCTGAACTGCTGGGACCTGGGAAGGGCAAAAAACGCAAGCCCAACCAAGTCTGCGCCCCTGAGGACTACCCGAGTGCCTGAACCTGAGCGGTTTAGACCTGGGAGGTGCATGCAGCCCAGGGCCGGCCTCGGATGGTTCCTGGCAGAGCAACCTAGAGCCTGAGCAGTATGGGCAGGGAAGGTACACATGCCATCAGCGGGGGCAGGCCCAGTGGGGCTGAGGCACTGCGAACACATGCCAGTGTTATTTGTTTGCAGTGTCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAATAAAGTGCCCACCACTGCCCCCTTTGTGTCAGGGCAGAAATCAGACACTGAAGAGATGAGCAAACAGAAGAAGCTAAAAGAGAGGGAACCGCCTTGAAAGCGACAGGTGCAATAGATTAAAACCCTGTCATTAGTACTGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCAGACCAAGGAACTAGCCAAAAATGAACTGACCCCACAATACCCACAACACCACCAGAGAAAGTCCTAGATATATTTTTACTATTTTTACGATCATTCTTTCTTTCTTTTTTTTAATTTAAGTCCTCTATTACTCCTTTAATTTTCACTTTTATAACCTATTACTTTGCAAAAAAAAGACCCTATTTTTTAAAAAGCAAACTTCATATATATATATATATATATATATATATATATTTTATAATTTTTGTGACTTTTTTTTCCTCTTTTTTTTTTCTTCTTTAACACTGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTTGTTATCAATTTTGTACCTTTAAGAACCCAATATTCAGTACCCATGTTTACTTGGGAGCGAGATTACTGGCTTGACTGCTCTCTCCCCCTTTAGACTCTGCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTGCTCTACCCAACTCTGTGAATTTCTGTGTGTTCCAGACAGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCTCTCTTTTTCATTACCCTCTTTTATCCTCCTGGCCACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGCGGTCCAATTGTGGAGTGCACATAAGGAAGTGATTACTGGCTAGCCTGCTCTCTCCTCTATTGATTCCACCTCATCTCATCTGGGTCACCTCTAACTCGCTCCTCCCTCTTCTCTTCTCCATGTAACTCTGTGAACCTCTCTGTGTGTCCCTCACTGTAGAGAAACTTTTCATCTTTAACCTAGATGTTTTATCAATGGTGTTTTATAGAAGGAGAAGTTTTGAGGCTACTGTAAAAATAAGACTGAAAACCGGAAGCAGGAGGCTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAGGGAACATTAATTGACAGGAGCTTATCAAACGCCTCCATACCTACACTGAAACCAAGCACCACACAAGGGCCAACAAGTTCCAGAATAAGACATACCATGCAAAATCCCCAGCAACACAGGAACACAGCCCTGAACTCCAATATACAGGCTGCCCAAAGTTACTACAAAACCAGACATCTCATAACTCATTACTGGACACTTCATTGCACTCCAGAGAGAAGAAATCCAGCTCCACACACCAGAACACTGACACAAGCTTCCCTAACCAAGAAACCTTGACAAGCCACCTGTACAACCCCACCCACAGCAAGGAAACTCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAACCTTAAAATGGGAAAGGAAATAATCACTCAAGTCCAAGAAACCCAGAGAGTCCAAAACAGGATAAACCCAAAGTGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATATCACACAAGGGAATTCCCATACGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGGAGGGAATGGCAGGACATATTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACACAGCAAGGATCGCATTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACTGGATCATACTTATCAATAATTACCATAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGATCCACCTCAAAACAGGGGACACATACAGACTGATAGTGAAGAGCTGGAAAAAGATTTTCCATGCAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACGAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGACGATATAACAATTATAAATATATATGCATCCAACATAGGATTACCACAATATGTAAGACAAATGTTAACAAGTATGAAAGGGGAAATTAACAATAACACAATAATAGTGGGAGACTTTCATACCCCACTCACACCTATGGAAAGATCAACTAAACAGAAAATTAACAATGAAACACAAACTTTAAATGATACAATAGACCAGTTATACCTAATTGATATCTATAGGACATTTCACCCCAAAACAATGAATTTCACCTTTTTATCAAGCGCACACGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAATCTAGCCTTGGCAAATTCAAAAAAATTGCAAATCATTCCCAGCATATTTTCTGACCACAAAGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTCAACAACACGCTGCTGAATAACCA TCONS_00247185 TCONS_00247187 r 3' 54727 TCONS_00247185 TCONS_00247187 r 3' 91347 EMBV3_12997 AAACCACGGTTGCATGTTTGCTTTTGATGTATCCCTTTGTGGAGTTAGCACTTTGGGGCC Gene GeneID:530189|RAD23B:NM_001046310:21_cdna Constitutive 0 NULL GeneID:530189 8 GENE RAD23B MGC137555 RAD23 homolog B (S. cerevisiae) EMBV3_35608 AGGCCTTGATGACTCTACCAACCGCCAAGGTTTTGATTTCCCTCCCACCTAACCCTGAGC Gene GeneID:531866|TTLL3:NM_001035387:143_cdna Constitutive 1 NULL GeneID:531866 22 GENE TTLL3 MGC142578 tubulin tyrosine ligase-like family, member 3 EMBV3_08279 TCCTGGTCAGGTCGCTGGGGATATTAAGTGAGGTCTTAGATGTGAAGGTAATTTGTGACC Gene BVV0102_344553 + 1 EMBV3_37789 GK000008.2:104587024-104797257 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226561 1 XLOC_138036 NonCoding TCONS_00226561 XLOC_138036 NonCoding NonCoding - 8:104620871-104624338 - TSS169370 2260 4 TCONS_00226561_3 55 0.324778761061947 2 0.348528563185228 2.40808827679785e-05 0 2.04734704049764e-05 7.34881273138225e-06 0.000308028125828324 0 0 2.87883805062559e-05 1.74559652483618e-05 0.000737331649842412 8.60978114335812e-05 0.000139230193868065 0.000300893651957751 0.000258095445832869 0.000123740346960942 0 0.000359961266712589 0 3.17298490131024e-05 0 0 7.88035404193958e-05 0.00023544017720547 0.000185449435269167 0 0 7.77763670375902e-06 0.000357006679455908 0.000264210986482277 5.32056972013167e-06 XM_005218393.1 SDR42E1 PREDICTED: Bos taurus short chain dehydrogenase/reductase family 42E, member 1 (SDR42E1), transcript variant X1, mRNA. 2e-15 89.7 77.59 0.0508849557522124 NM_001202515.1 CFLAR Homo sapiens CASP8 and FADD-like apoptosis regulator (CFLAR), 4e-10 71.6 75.25 0.0411504424778761 0 noncoding CTAGACAGACGTGGTCTCCACCGGGCTCTGATGGGTGGACCTCCGCCTTCCGCTTCTAGTGATTCTGTGCGCATCCTCCCCTCCTCCTTCACCCTTCCTCCTCACTCCCCATCCCCATCCTGCTGCCTTCTCTGGGCCCGGAGGCACCCTCTAGAATTAGCTCTCCCGCCCCAGGCTCCCTCGTAAACTCTCCCCGAGGGTCCCTCTCTCCCTCTGAGGAGGCGGAGCCACTGGGGACGTCCCCAGGCAGCCGTGCTGAGTGCTCTGCCCCGGGGTACAGGCTGGAGGTGCCTAGTCAGCGCTGCCGCGGCGCTGGGTCCTGCGGGCTGGGCGGGGGTGCCCGGGGCGGGTGGGGGCGGTGCTGGTGGTGAGCTGGGCTCTGGTACCACCCCACCCTCCAACCGGGGAAAGCTCGCTGGGAAACCGACATTGGCTTTACATCTGACTTGCGGTTGACCTTGGACCCTCTCGGATCTGTTTCCTCGTTAGTAAAATACGGAGATCATAACAGTACTAACCTCCAGAATGAATGCGTGCTGGCCAAAACCGCTAGGATCTAAACTCCGGTGATACTTATGGAGACGGAAGATGCTGGCGGTGACCTGCCCACGTCTGCTCGGCACTTGCCGGATCTGTTCACACCTAAGGCTTCCTAACTCACACACCTGGAACTCTGCCTGAGAGCTTGCTCTGGCTGCAGGAGCAAACTTGGCCTGCACGTGGGGATGACCAGAAAAGTCAGGGAGTTAATGCCGCAGGAGCGATCGTCAAGCACTGAAGGATGAGAACTGGTGAATGTATATCCTGACTTCCTCACTTCCCGGTGGGCAGCTTTGAGACCTTTCAGTTGTATGCCTCCTGTTGTTGCCCAGCTGGAGGGAGCCCCAGTTGCCCACAGGAGCGACCTGCTCCTCACATCCCCGATGTGGCTTCCTTCCCTCCCGAGCCAGGTCCCTGCCCCTTAGTGATGCCTCCCGGATCGGCTGCCATAGAAACTGTGTGCTCGGCGCTGGAGCTTAGTGTCTCCCGGAGTGGTCCTGGCATGGTGGTCATCATCAGCCCTGGAGGCTTTGAGAGGCACAAGCCTGGGTGGAAAACAAATCTCCCTTCCCCGAAGATCAAGTCCAAAGGATGACTCTTCCAGGAGCACTGAAGAGATAGACATCTGTCTGTCTTGTACCACCTTGGTGCTGGTACCATCTTGAAAGACTGTTTGAAATGCATCCTGAGTGAAACGACCAGGGCTGGGAATGCTGAGTGCAGGAATGAGTGAATGAGCATTGACCCACGGATCTCCCTCCACATCGCTGCTGCCTCCAGGCTCACGACAAGGAAGGCCTGGCAACACTTAGGGTTGTGGGGAAGGAGCACGTTGTTTGAACAAGGGAGTCATGATTCACAATCAAAGCAGTAATAAGAGCCCAGACATCATGAGTTCACCTGTCTAGGTCACAAATTACCTTCACATCTAAGATCTCACTTAATATCCCCAACGACCTGACCAGGAAGATTTTCTTCTAATTACTATGATTATTAGTTGTATCATCATTACCCTCATTTCATCTTACTGTAGGATGCAGCCAGCGCCTCCTGAGTCCTGACAGACATGAATAATCAATCAAGGTGTTCTCACCCACTGAGCCTCAGCTCCTTCTCCATCTAGCACTGTAGGCAGGGGCTACCAATCAACTGACATGAAAGCCGAAGCCCATTTTTCTTCCCTGGCTAGCAGCTTTCCTGACAACAATAAATTCTTATTAAATTAAATTGAAAGGCTCAAGGAAGAAGAAGCAAGCTAGGCTCTGGGCCTGTGTCTCCTGATGCCCACCCAGTCCAACACTCTGAGTGCAGACATCAGTTAGAAGGCTGCTTCATTAAGAAAGTTTCCTTCATTTCTCTAACTTAGTGAGACAGCCCCAGATACTGTGATGATACATATACACACACTGACAGATACACACACCCTTTCTCCAAGGCAGACTTCCCTTAAAACTTAAAAAAGAAAAAAATCAGAACTTTTCTGGCAGCCCAGCAGTTAAGACTCCTTCCTTCCAATGCAGGTGGTATGGGTTCGATCTCTGGTTGGAGAAATAAGATTCCATATGTCTTGCAGCCAAAGGAAAAAAAAAAAAAAAAAACCAACCCTATTCCTGTGGTGATAGTTACACAACTCTGTAAATATACCAAAAACCATTGTACATAAAGCAAGCAAATTGTATGGTGTGTAAATTACAACTCAATAAAAAATTTAAAAAGTCAC TCONS_00226558 TCONS_00226559 s 3' 77845 TCONS_00226558 TCONS_00226559 s 3' 77845 EMBV3_20767 TTCTTACCCTTTCCTGGGTCATTAAATTGGTCATGGTACATGTTTTTCACAGATTAGAAC Gene BVT0102_089490 + 0 NULL GK000019.2:62313360-62317495 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098113 1 XLOC_058429 Coding TCONS_00098113 XLOC_058429 Coding Coding PRKAR1A 19:62313647-62332169 j TSS72542 5297 1 TCONS_00098113_5 380 0.10553143288654 11 0.714594244371254 0.00225753147564712 0.00262814449640722 0.00245289316329111 0.00147345298900653 0.00226045214763188 0.000912066376514162 0.00216676208603513 0.00201714614259559 0.0028507363553027 0.000239821106892861 0.000155135693242586 0.000107417555541899 0.000497130272357013 0.000527473161610218 0.000342071951991046 0.00387560875766127 0.00221362963853635 0.00311183238347264 0.00234431171152344 0.00244076854312488 0.00159795484449903 0.00217003587931539 0.00176482210853928 0.00310037544163963 0.00252651523943899 0.0025061278354928 0.00153848790563478 0.000475829546286206 0.000189651138060946 0.00121443080747204 NM_001076358.1 PRKAR1A Bos taurus protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) (PRKAR1A), mRNA. 0.0 2412 100.00 0.252218236737776 NM_212471.2 PRKAR1A Homo sapiens protein kinase, cAMP-dependent, regulatory, type I, alpha (PRKAR1A), transcript variant 2, mRNA. 0.0 2542 75.41 0.694544081555598 TCONS_00098113_5 sp|P00514|KAP0_BOVIN KAP0_BOVIN cAMP-dependent protein kinase type I-alpha regulatory subunit; 0.0 779 100.00 0.997368421052632 2 coding 0 0 0 0 1.41229932347262 0.0227254812944337 -0.121729615270804 0.230781360921724 CGGGAGTGAGGGCGCTAGGCGAGCGCGGGACGGGCACGCGAGCTGCCGCGCCGCGCGCACAGGGACCGGGAGCCCGCGGAGCAGCTGGGTGCTCGCGGCGTCCGAACGGGGACAGTGAACCATGGCTTCCGGCACCACCGCCAGCGAGGAGGAGCGCAGCCTCCGGGAATGCGAGCTCTATGTCCAGAAGCACAACATCCAGGCGCTGCTCAAGGACTCCATCGTGCAGCTGTGCACCGCACGGCCCGAGAGGCCCATGGCCTTCCTCAGGGAATACTTCGAGAAGCTGGAGAAGGAGGAGGCAAAGCAGATCCAGAACCTGCAGAAAGCAGGCAGCCGTGCAGACTCTCGGGAGGATGAAATCTCCCCGCCGCCCCCTAACCCGGTGGTGAAGGGCCGGCGGCGACGCGGGGCCATCAGCGCTGAGGTCTACACCGAGGAGGATGCCGCGTCCTATGTTCGGAAGGTTATACCGAAAGATTATAAGACAATGGCTGCTTTAGCTAAAGCCATTGAAAAGAACGTACTGTTTTCACATCTTGATGATAACGAGAGAAGTGACATTTTTGACGCCATGTTCCCGGTTTCCTTTATTGCTGGAGAGACTGTTATTCAGCAGGGTGACGAAGGGGATAACTTCTACGTGATTGACCAAGGAGAGATGGACGTCTATGTCAACAATGAATGGGCAACCAGTGTTGGGGAAGGAGGGAGCTTCGGGGAGCTTGCTCTGATTTACGGGACTCCTCGAGCGGCCACTGTCAAGGCCAAGACGAACGTGAAACTGTGGGGCATTGACCGGGACAGCTACAGAAGGATCCTCATGGGAAGCACGCTGAGAAAGCGGAAGATGTATGAGGAGTTTCTTAGTAAAGTGTCTATTTTAGAATCTCTGGACAAGTGGGAGCGTCTCACGGTAGCTGATGCATTGGAACCAGTCCAGTTTGAAGACGGGCAGAAGATTGTGGTACAGGGGGAGCCGGGTGATGAATTCTTCATTATTTTAGAGGGCTCAGCCGCGGTGCTGCAGCGGCGCTCAGAGAACGAAGAGTTTGTGGAAGTGGGAAGGTTGGGGCCTTCAGACTACTTCGGCGAGATCGCTCTGCTGATGAACCGGCCCCGTGCAGCCACCGTGGTGGCCCGTGGCCCGCTGAAGTGCGTCAAGCTGGACCGGCCGCGGTTCGAGCGCGTTCTCGGCCCGTGCTCCGACATCCTCAAGCGCAACATCCAGCAGTACAACAGCTTCGTGTCCCTGTCTGTCTGAGGCCCGCCCCGGCGCCCGGTCCGCCCAGGCCCCCACGCAGACGCTCTGTGCCCGCGCAGCGCCCTGTGGCCACTGGCACCGCAGCTTCTTGTCGGTTTCTGTTCAAGTTGCTTTTGTGGCACCGTTTTTATTTTGGAGCATTACTGAGTGCTCACACAGTTAAATAAATAGAAGGGTTCTCTGGAGACTTTGCTGTCCCCGCCTGTCTGTGCAGTGTTGGTGTTCACACCCCAGCCCCCGCCGCCCCTGCCCCAGCCTGGCTCGCTGTCTGCCGAGGGTTGACCCCGCTCCCCTGAGGTGCGTGGCGTCTGAGGCACAGCGCGAGGTTTCCTTGAAGTGATGCACGTTCCTGCTGCCGCAAGTGTTCTTTAGACTGTGGCCATGTGTGCTGTCTGCCTCTATGGAATAAATGATTTCCCACGAAGCTCTGAGGATTAGGAGGAACAGGTGTAGAAGAATCTTCATGTAGTAGGATGTCTGCCTGTAGTTAGAGTAGCTTAAGGGTGGAAATGCCCATTGTTGCTATGATACAACCAGTTCTTTTTCTTTTTTAATAAGTATTTGTATTTGTCAGGCTGATACGCCTGGTTTTGTTTATCTCTGGTTGTTAAGGTTTCCTCTTCAGTTCTGCAGCATGTTGAGGTGTGCCTGTCTATTCCTGCTTTCTGCATTTCACACCAAATCATAAGCCACAAATACCAGTTCTGATTTAACGACATCTGCCTCAGCTCACAGATTCTGATTAGACCTTCCTCTTTCCAGCTAGTGCCAAATACTCAGCAGCAGATGCTGAATTGATAATGAGAGTTCAAGGTCTGCATTCCTGGTTGTTAGCTCAGAGCCTCTGGTTAGCGTATGTCCTTCAGGTGACCCCAGGATGGTCATCTCTTAGGCTCTGCAAGCCCTGACTCCAGGAAAGATACACTCCATGTCGATGTAACAGAAAAATGGAAGAGGGGTTGCTAAAGGGGGCGATGGCGGGCAGACGAGTTCAGTGTTGGACTCTGCGCCCTGAGTTCACTGGGGCAGGGGACTCGGGAAGACGTTCTTTACTTGGCTTCAGCGCCCGCACCACCCCTCGCCCCGCTTTCAATCAGCTAGACTTCATGGGGGCTTGGGGGTGAGGTAGGATGTGTCTGTGTTACACATCCATCAGAGAGGCCATCCTGCTGAGAAGTTCTGCTTCCCTATCCGCTGTTTTATTCCCTGGGAGACTTTTCTGTGTAAACTTGTTTTGAGTCTTAACTGTGTTCCGGTGTTTTCTAGCCCTATCAACCTTGTGCTGTTACACTCTTCCCTTGCACCAATGATAGCCCCACTGTTCATCTTTATTGTTTTTTAAACAGCATCTCACAGTTCCGTAATGTAGGCACTTCTGTTCGCATTGTGATTTTTGTAACCTAACATGTAGGGGTATATTTGGGAGTGACTACAAGTGTTTCTTTTTCCATCTGTATGCAACTGGCTCTGATTAGTAATCCCTTCTTACCCTTTCCTGGGTCATTAAATTGGTCATGGTACATGTTTTTCACAGATTAGAACAATTTTTAGGTTGTTACTAGTTTGGAGTATAAATCTGGGAAACATTTTATTTACATTTTAGTGTGGAATAGAAAGCCACCTTATTACATATTTTTTATTTTTCAAAATTATACTAAATGAGGATTTTTGATCTGTATTTTGTGTTTAGCTGCCTTTTTATATTTAAAAGATTAAAAATTGTTAATTAGCTTAAAGCTTAATTTGATCTTTGTTTAAATGCCAAACTGTACTTTAGAATGTCATACGTTTGCACAGTTTCCTGTATGTATAAAATCATGTTCGTGTATATTTAGATACCCACAATGCTTCGTAAATGAATTTTGCTCTTAAGTCATTTGGCTTTGCTGTTTACCCCTTTTTGTAGTTTTTAATCTAAGCAAACTGAAGTCTGAATTTAAAGATGATCACATTTTAAGCTTTGTCTTTGTGCAGTCTGGGTGTATATGCGAAATCACAGTTGCGTCGTTTGTCTCAGCGGACATCCTGAGCTTTAGCAGTCATTTCTGGGCTTGGTAAGGGAGTTTGAGATCTCCTGCTCTAACAGTGTGGACACCAAAGGACCATTTTGTATTGTTCCTGGTTACTAGTCCGATTATTCTGTGTGTGCTAATATACTCTCTTCTTTTTGTTATAGATTGTCTCAACGGTAGGTCAAGTAATAAAAGATTAAATAATTTAATTCTTTAACGAATCAGTCTTTCTTCCCTTTCTCCTTTCCTTCTCTTCTCCATCCCCAGTCCCCCAGAAACTCCGAATCCAAATCCGGTCCGCAAGGATGAAAATTGATTGTGAGTTAGGGGATGAGGGGATCATCGGAAGAATACGTTTGTTTTCAGTGTTTTCCAGTTCAGTTTGTCAGTGAATCTAAACTCCTTACTTTCAGGGTAATTGAGATGTACCGGATATGTTTACTGAATGATGGAAGGAAAAGGTTCAATCAAGTCAAAGAATTCCTTTTTGTTAAGGGTAGACTGGTTCTCTGACTCCTGGATCAGCGTGCTCCTTGGTCTAAATTTAATAAGTGCGTTTGTGTATTTAGGTGTGTGTCTGTGTTTTGCACACATACAAGGTCATTTCTAATACTTATTCCTCAGATTTCTGAGGCATGGGATGGGTAATTGAGTCTGTTAGGATGGTAGATTTCGTTTCTTCACACCCTGCTGGAACTGTGCTGCTTCGTAGCACATGCGCTTTGTCCACATGCAGTCACCTCCTCCCGCAGCCCACTGGAGTTCGAATATTTAACGGACTATAATTGAAGAGCATTTTCCTGGGTTGACTATACTGGTTGTAGATTAATTGTCCCTCTCAAACACTGGCTCATATGAAATCCTTTTTTAATGATGTGAGTGTATTGATGTCGTGAAGTTGAAGTTGTATGATGTTAGTTTTCTTAACATTGCCTTCTCTCCAACCACAAATTGACAGCTGAACCCGTTCTGTATTTTTGTTAGGCCCCAGCAAGTGTATTTCTAGGTGGGCTGAAACAGCACTGAGAAGCAGCGTCTGGATCACCATTAAATGTGACCCCCAAGTAGCTTACCAGGGAAGCCTGGCGAGGAGAAGCGGAAATCTCTCCCTTCTTACCCCTGGAATTTTACGCAGAAGCCAGTGTTGCTGCTGAAGGACAAGTTTGTGAAGTGCAGACTCTTCACAGTTGGCACAGTCTGTGGTTCAGGGTCTGTGGCCCTCCCTAGTCTGTGGTGCAGAGCTGTGACTTCATCCTGATGCAGCCTAAAACCCAAACCCCAGATGACGAGGGTTGGTTCTTTTGTGAAAGCTCTGCCAGTGTAGATAAGCAGCGCTGTGGTTTCCCCAGTCACCACTAGGTGGAGAGCTTGTCATCGCCTTTGTTCACCTTAGAGTCATCGCAGTTGATCCTCGTTCCTCACGGAAGCTGTATTTGCGCATTTTGCAAACCTGCCTGCTCGCTGGGACGTGTCTGTACCCCCAGCTTAGCCCTTGCAGCACTGTCACGGCCACGCCCAGGCCAGAGTGGGGCGGAGGAGACGCTGTCCTGCCCGCCACATGCCCGGCCCGGGGCAGGCGGCACCCTGCCTCCTTTCAGACTTAGGTCTGTGATCCAGCGCCCTTCCTGTTGGTCTACTTAATGCCCCCTTTTTTTTGGTGTTTTTGAGCTGCTCTGTCGGTTATTTCGCTGTTTAAAATGGCCCCAGAGGAGTTGTCAGCTTCTGGCTCGTGTTCTCGAGTGTGACGACCTTCTCTCAGGCGTGGGTTGCAGTGCTGTTGGCCACGAGCTCAGCATTCATGAAGCAACAGTAGTAGCTGAGGTGCTCACACACCCCACACACAGCAAAGGATCACGGGTTGGTTGGTGGGCAAAAGTGTAATGAGAGGCTCGGGGGAACCTGCGGCCCCGTGTTTCTAATAGGAGCAAACAGCTGTCTCCCCGACTCACTGTCTCTGGTGACTCTGTCTACCATTTTTTGGTGGTGGCAGTTCAGTTGCTCAGTCGTGTCTGACTCTTTGC EMBV3_29936 CAGAAAGCACCGTTGACTCTGTAGCGACAGACTCGGTGGGGTGGCTTGCGCAGTAAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36901 TATTTTACATATCTCATCTTGCTCACTTGATTAACATACCCTAGCCTGTACTGCTTCCGA Gene BVV0102_232532 + 0 NULL GK000008.2:51336701-51343085 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227630 TCONS_00227631 TCONS_00227632 TCONS_00227628 TCONS_00227629 1 XLOC_138283 Coding TCONS_00227632 XLOC_138283 Coding Coding C8H9orf41 8:51341649-51384079 j TSS169895 3661 1 TCONS_00227632_3 330 8 0.913903226566735 0.000187626908006221 0.00033183047628417 0.000305552338382397 0.000157375732987536 0.000245639416509114 0.000131930765331065 0.000733034046641433 0.000388344025435456 0.000969735576288363 6.61598585497398e-10 2.98253894610145e-05 0.000210974967405569 5.57542434240339e-05 0.000166640867154948 0.000142269072135564 0.00200716976771924 0.0016204189705156 0.00188508497016713 0.000154807137077965 0.000198351313076009 4.71365337509653e-05 0.000681438611942941 0.000660159448207314 0.00179916669419893 1.59647096374398e-08 0.000121824715500569 0.000249980011421532 2.31183339937086e-07 9.38773673072555e-05 0.000258297559143941 XM_580351.6 C8H9orf41 PREDICTED: Bos taurus chromosome 8 open reading frame, human C9orf41 (C8H9orf41), mRNA. 0.0 6295 100.00 0.953018301010653 NM_152420.1 C9orf41 Homo sapiens chromosome 9 open reading frame 41 (C9orf41), mRNA. 0.0 2219 92.78 0.406992624965856 TCONS_00227632_3 sp|Q8N4J0|CI041_HUMAN CI041_HUMAN UPF0586 protein C9orf41; 0.0 688 98.48 0.996969696969697 1 coding 0 1 0 0 -0.108844351083806 0.576443091139634 0.00294852696581786 0.951638841498826 CTGTCGCAGAAGCCTGGCATCAACACCAGTATGCATGAGCGAGTGCACCGAACAGAAAGACAGTTTCGATCACTCCCAGCTAATCAACAGAAACTACTTCCTCAGTTTCTTCTTCACTTGGACAAGATCCGGAAATGTGTTGATCATAATCAAGAAATACTACTGACCATTGTGAATGATTGCATACATATGTTTGAAAATAAAGAATATGGAGAAGATGGGAATGGAAAGATTATGCCAGCATCTACGTTTGACATGGATAAGTTAAAATCCACATTGAAACAGTTTGTGAGAGACTGGAGTGAAACTGGGAAAGCAGAAAGGGATGCCTGCTACCAACCAATCATTAAAGAAATTTTAAAAAATTTTCCAAAAGAGAAATGGGATCCTTCTAAAGTAAATATTCTGGTACCTGGTGCTGGACTAGGAAGACTGGCCTGGGAAATAGCTATGCTAGGTTATGCTTGTCAAGGAAATGAATGGAGTTTTTTTATGCTTTTTTCTTCAAACTTTGTACTCAACAGATGTTCTGAAATTAATAAATATAAGCTTTATCCCTGGATTCATCAGTTTAGCAATAATCGAAGGTCAGCTGATCAGATTCGACCCATCTTTTTCCCTGATGTTGACCCCCACAGTCTTCCTCCTGGTTCTAACTTTTCTATGACAGCAGGAGATTTTCAGGAGATATATTCAGAATGCAATACCTGGGACTGTATTGCTACCTGTTTCTTCATAGACACAGCTCACAATGTAATTGATTATATTGATACAATATGGAAAATACTCAAGCCAGGTGGAATTTGGATAAATCTAGGTCCTCTGCTGTACCACTTTGAAAATTTGGCGAATGAACTTTCCATAGAATTAAGCTATGAGGATATAAAAAATGTTGTTCTGCAGTATGGATTCCAGTTAGAGGTGGAAAAAGAATCTGTCTTGTCAACATATACTGTGAATGATCTATCCATGATGAAATACTACTATGAATGTGTTTTGTTTGTGGTCCGTAAACCACAATAACAGTCTCAAGTGATTATCATCAAGAAAAAAGTTTAATAGCAAATGCTGAAATAAACAACTCAGAATCAACTATCATAATGACAGGACACAACCTCAAATCAGTGGTGCCTTCTTATTCCTAACAAAATTTAGAAATAGTGTCTATTTTCTTAATATGTCTATCGCTTTTTCAGAAATATACTATGCCATGCATATTTGTACTACACAAGTAAAAATGGAGGAAATGTCTTCAAGTATACTTTTTCCTTGAAGCCCAGAATTATCTTTCAGTAGAAAAAACTTTATTTCCAGTGTCTTCATGAAGCTGTCCGTTAAGTCTGCCATATGAATAACTTATAGTATTGCAATCCATAAAAATCTCCCTTTTTGTTGTTTTGTATGCATCGTACTTGTTATTTTTTAAGGATCCTTTGTCACTTTCAACATCTGGAATTGGGATTTTGTTTACTTTGAACCTAAGCAATCTATACAGAAAATATTTATCCTTTTTTATCATTCAAATTATTTTATTTTCTAGCTCAGCTGGATTTATAGTTAGCATCAAACATTTCATCTTTACAAAATGCTGAGTTTATAGGATCAAATTAGTCTTTTGGTCACACTAAGTTGAACACTTTGAAAGCATACTCATCATGGATCACTCTGAAATATATGAGATCTCAGCATTCTAAGTGAGGCACACAAGTATTTATTAAAGGTACCGCTAGGAAACTGGGAAAATAAGAATAAAATCTGCCCATTTGAAATATATGATTTCAAACTATAAACAAATAGTTTGTCAGTTAGATGTTTACAATAATGTCTTTACTTTAGATTACCTGAATTACAAAAGCAAGCACTTTTTTTTTCCGTTAAAACAATTATATACTAGTAAAAACTGTCATGATAGTATTAATGTGGAGAAATTTTCATTTTGAAATTTAGGGATAAATAACTGCCCATGGTCTGTGTATTTAATACTGTAAGCAGCAACCATTAGCATAATTTCAGATTAGTATCCATTTTGTTCCCTGATAGCTATAGCTAAAACAGTATATGCTGCTTTAAATTTCTACCTCTAGCAGATCTTTTTTGGAGGGAGTTTTCCTTTGTATTTTTTTAATGTTTATTACCCTGTTTTCCAGTAGCTTGATAAATAGATGACTAATTTAATGTGTTTTAACCTTTTCTTGGAGAAAAGGGAGTAATATTGAATATTTTCATAGATGGTTGTGATGACATTAAGTGACCTCTGTGGCAATTTTAATTAAATAGACTTAATCTCAGTAATGTGCTGGTAACATAAATGTCATGTTTTCATAGGAAAACTTATTTATAAATCTTTACACCTTTATTGTCAGTTAGGTGAGGGGAGTCCTGGTGTGATTTGACATCCTAACCAGTAGGATCTTTTCTGCATACACTACCGGAGCGCCTGGGGCCTTTATGCCCATGATGTGATAAATGATTCCATTAAGTTGATTTGTCAAGTTATAGACACCTGTATGTAATCTACTGAATGTTTCTGAAAAACTATTTCTCTTTTTTTGTGTTCCTGAGTACTTGGCAGATGTTCATTTAGTGGGAATTCTGACCTACCACATGGATGAACTTGAAATTAATGGCAAGGGAAAAAAAAAACGAACTTATTTTCTTTTAAAGAAAGAAACTTAAAAAAGAGCATAAGTATTTCTAAAAAGCCATTGAAAGGAAGCATGCTGTTTGTAATTTAGAAATGCTTTTTATTCACTGATAAGTATTCACTTTTTTACAGCTTGTATCAAAACAAATGATTTTGGTTTTCTCATAAAGGGCAAAACAGGTTGACACCAATGGGTTGGCATTTCTTAAAATTTTTGCTATCAGGTTTTATCCTTTAATAATGTTATTTGTACTTCTAAATTACAGCTTTTAGTTAATTATGAAATCAGTTATTTCATTTGTTTCTTGACTTCTCCTCCATATTATGAATGCTGTTTTTAAAATATACTACACAAATTTGCATCCCTTTTTTTCTCTTATAGCTTTTATAGTTAATATATTCTAAACTTGAAAATTGTGGTATCAATCAATAATAGAGGTGTCACTGGAGGATTTAATTTTGTATTATGTGTAGAAATAGCTACTAAAGTGTGTAAGCCTTAAAGTTTAAAACATTTTTCTTAAATAACTATACACAGATTTTTCATTTTTTTCATAAAGTGGGAGGAGATAGGTCATTCTGCTTGCTTTTCTTTTTTTATTTCCATAATCGGAAGCAGTACAGGCTAGGGTATGTTAATCAAGTGAGCAAGATGAGATATGTAAAATATAAAGAGAAGCTGTATAAATCACAGTATAAAATTAAGTTTGGGAATTGTAAAATGTACTGTATTTATATGTAACTCATTCTAAAAGTTGCCACAAAGGCTGAATTGGAAGCTTCATGTCTGCATGAAATTTCCTATATTTTTAATGTGTATGATGGACTTAATTTTTCTTGAATATTAAAATCTGACAATTGCTATGAAACTGTATTTGCTTGCTTGTTTCCATCTAACATGGGATAACCATAGATATGGGAATTTTAATTAATTGAGAACAATACATTTGGACCCTGGGATTAGCCTTTTATATGCTTCTAGAAAGTCAATATGATTAGTTGAACTCTGAGTATGCT EMBV3_22676 ACACTGCCCGTTTCCGTTTCTTGATTGGGCAAAGGCTTAGTATCCATTCTGAAAGCTGTC Gene GeneID:509519|LDHAL6B:NM_001035275:4_cdna Constitutive 0 NULL GeneID:509519 9 GENE LDHAL6B MGC127890 lactate dehydrogenase A-like 6B EMBV3_39964 GTGGCAAAGCTAGGATTTGATTCCATACTGGGCTAAGTCACTCTACCTGTGGCAAGCACA Gene BVV0101_043974 + 0 NULL GK000003.2:57857025-58106721 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06133 TACATCAAGCCACACGTGGACAGCATCAAGGGGCTCGGCTCGTTATGACTTCTCCCACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03103 CTGGCTGTTTCATTTTACATTCCCACCAGCGATAAGTGATTGGGGTTCCTCTTTCTCCTC Gene GeneID:281055|CD3G:NM_001040472:8_cdna Constitutive 0 NULL GeneID:281055 15 GENE CD3G MGC128305 CD3g molecule, gamma (CD3-TCR complex) EMBV3_05171 TCTCTAGCCCTTCTGACTCCCGCTGTGGAAGGATGCCTCTAAGGGCAGGGGTATGTATAT Gene GeneID:100302586|LOC100302586:NM_001163727:5_cdna Constitutive 0 NULL GeneID:100302586 16 GENE LOC100302586 NULL hypothetical protein LOC100302586 EMBV3_42298 TTATCCCCTCTTGCTTCCAGATGCTCCTAAATAACCCCGAGTGCCCAAGGCACGGACCCA Gene BVT0102_096484 - 0 NULL GK000019.2:48912651-48924480 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097461 TCONS_00097464 TCONS_00097462 TCONS_00097465 TCONS_00097467 TCONS_00097463 TCONS_00097460 1 XLOC_058257 Coding TCONS_00097462 XLOC_058257 Coding Coding ERN1 19:48919347-48956919 j TSS72210 7964 1 TCONS_00097462_5 857 0.0506027122049222 21 0.788586942056373 0.0109566720339912 0.000502772837610969 0.0061392416314682 4.92149356198646e-07 0.00450559389646975 5.26164225814597e-06 0.0038668834883736 0.00210162600898271 0.00354059901529185 0.000247096989964173 0.00015437073902229 0.000135375268615048 0.00128133690389655 3.57138632590162e-05 0.00113549363037403 5.17118644764434e-20 2.06952773338806e-11 2.3277677912366e-05 0.00173936434546113 0.00114615856421281 2.67859763007699e-07 4.82395226386505e-05 2.45703015332318e-11 0.000135529160126977 0.00584218929701653 0.000750367664689807 0.00283974785376727 8.33041000732847e-05 6.23352238144318e-05 8.15129637748569e-05 XM_001789477.2 ERN1 PREDICTED: Bos taurus endoplasmic reticulum to nucleus signaling 1 (ERN1), mRNA. 0.0 1.390e+04 100.00 0.967478653942742 XM_005257141.1 ERN1 PREDICTED: Homo sapiens endoplasmic reticulum to nucleus signaling 1 (ERN1), transcript variant X1, mRNA. 0.0 3900 79.46 0.556253139126067 TCONS_00097462_5 sp|Q9EQY0|ERN1_MOUSE ERN1_MOUSE Serine/threonine-protein kinase/endoribonuclease IRE1; 0.0 1573 92.54 0.998833138856476 3 coding 0 0 0 0 0.0172774833357403 0.895271937080835 0.0316096600012165 0.56687868002688 GCCAACCGAAAGTTCCTCCTGTTTCCTGAAGTGCTCTTGGTTTTAATGAATTGTTTGTTTGCTGCCCACAGACCACATGTGATCCAGTCCTGCAGGTTCCAACACACGTGGAAGAGCCTGCCTTCCTCCCAGATCCCAACGATGGCAGCCTGTACACGCTTGGGGGCAAGAACAACGAAGGCCTGACGAAACTTCCCTTTACGATCCCTGAGTTGGTGCAGGCATCTCCGTGCCGAAGTTCAGATGGCATTCTCTACATGGGTAAAAAGCAGGACATTTGGTACGTTATCGACCTCCTGACTGGGGAGAAGCAGCAGACCCTGTCATCAGCCTTTGCAGACAGCCTCTGCCCATCAACCTCTCTTCTGTATCTGGGGCGAACAGAGTACACCATCACCATGTACGACACCAAGACCCGCGAGCTGCGCTGGAACGCCACCTACTTCGACTACGCGGCCGCGCTGCCCGAGGACGGTGGGGACTACAAGATGTCCCATTTTGTGTCCAATGGCGATGGGCTGGTGGTGACGGTGGACAGCGAGTCTGGGGACGTCCTGTGGATCCAAAACTATGCTTCCCCCGTGGTGGCCTTTTACATCTGGCAGCGCGAGGGCCTGCGGAAGGTGATGCACATCAACGTCGCCGTGGAGACCCTGCGCTACCTGACCTTCATGTCGGGGGAGGTGGGGCGCATCACCAAGTGGAAGTACCCATTCCCCAAGGAGACGGAGGCCAAGAGCAAGCTGACGCCCACCCTGTATGTGGGGAAATACTCCACCAGCCTCTATGCTTCCCCCTCGATGGTGCATGAGGGTGTCGCCGTTGTGCCCCGGGGCAGCACCCTTCCTTTGCTGGAAGGCCCCCAGACCGACGGTGTCACCATCGGGGACAAAGGGGAGTGTGTGATCACGCCCAGCACGGACCTGAAGTTCGACCCAGGACTCAAAGGCAAGAGCAAGCTCAACTACCTGCGGAACTACTGGCTGCTCATCGGACACCACGAAACCCCACTGTCCGCGTCCACCAAGATGCTGGAGCGCTTCCCCAACAACCTGCCCAAACACCGGGAGAATGTGATTCCCGCCGACTCGGAGAAGAAGAGCTTTGAGGAGGTCATTGACCTGGTTGACCAGACTTCAGAAAATGCACCTACCACGGTTTCTCCGGACGTGGAAGAGAAGTTCGATCATGCCCCTGCCAAGCCCGAGGCCCCTGTGGACTCCATGCTCAAGGACATGGCCACCATCATCCTGAGCACCTTCCTGCTCATCGGCTGGGTGGCTTTCATCATCACTTACCCCCTGAGCATCCACCAGCAGCGACAGCTCCAGCACCAGCAGTTCCAGAAGGAACTGGAGAAGATCCAGCTCCTGCAGCAGCAGCAGCTGCCCTTCCACCCGCCCGGGGACGCGGCACAGGACGCCGAGCTCCAGGACTCATCCGGCCAGTACTCGGAGAGCTCGGCCACCAGCAGCCCCAGCACGTCCCCCCGAGCCTCCAACCACTCGCTCCACTCCACCGGCTGCACCTCCAAGGCTGTCACCAGCCCCTTCCTGGAGCAGGACGATGAGGATGAGGAGACCGGCATGGTGATAGTTGGGAAAATCTCCTTCTGTCCAAAGGATGTCCTGGGCCATGGAGCTGAGGGCACGATCGTGTACCGGGGCATGTTTGACAATCGTGACGTGGCAGTCAAGAGGATCCTGCCCGAGTGTTTCAGTTTCGCGGACCGTGAGGTCCAGCTGCTGAGAGAGTCGGACGAGCACCCAAACGTGATCCGCTACTTCTGCACTGAGAGGGACCGGCAGTTCCAGTACATCGCCATCGAGCTGTGCGCGGCCACGCTGCAGGAGTACGTGGAGCAGAAGGATTTCGCCCACCTCGGCCTGGAGCCCATCACCCTGCTGCAACAGACCACCTCGGGCCTGGCCCACCTGCACTCCCTCAACATTGTTCACAGAGACCTGAAGCCCCACAACATCCTCCTCTCCATGCCCAACGCACACGGCAGGATCAAGGCCATGATCTCCGACTTCGGCCTCTGCAAGAAGCTGGCCGTGGGCAGGCACAGCTTCAGCCGCCGCTCGGGGGTGCCGGGCACCGAAGGTTGGATCGCCCCGGAGATGCTGAGCGAAGACTGCAAGGAGAACCCCACCTACACGGTGGACATCTTCTCCGCGGGCTGCGTCTTCTACTACGTGATATCTGAGGGCAGCCACCCCTTTGGCAAGTCCCTGCAACGCCAGGCCAACATCCTCCTGGGTGCCTACAGCCTTGACTGCCTGCACCCAGAGAAGCATGAGGACGTCATTGCCCGGGAATTAATAGAGAAGATGATCGCCATGGACCCCCAGAAGCGCCCGTCAGCGAAGCATGTGCTGAAACACCCTTTCTTCTGGAGCCTGGAAAAGCAGCTCCAGTTCTTCCAGGACGTGAGTGACCGGATAGAGAAAGAGGCCCTGGATGGCCCGATAGTGAAGCAGCTGGAGCGCGGCGGGCGGGCCGTGGTGAAGATGGACTGGCGGGAGAACATCACCGTCCCCCTGCAGACAGATCTGCGGAAATTCAGAACCTATAAAGGCAGTTCGGTCCGAGATCTCCTCAGAGCCATGAGGAATAAGAAGCACCACTACCGGGAGCTGCCCGAGGAGGTGCAGCAGACGCTGGGCGCCCTCCCTGACGACTTCGTGCGCTACTTCACCTCCCGCTTCCCCCACCTTCTCTCACACACCTACCGTGCCATGGAGCTGTGCTGCCACGAGAGGCCCTTCCAGCCCTACTACCACGAGCCCCCCGAGCCCCAGCCCCCCGTGACTGCAGACGCCCTCTGAGCCGGGCGGCCTCCACGCTGGTGGCCTCGCTGGGACTGAGGGCCTGGTCTCTACGAGCCGCAGCCCGCTGCCTCCTGGCCGAGCAGGGAGACCAGGCCCGGAAGCCAAGTGCCTTGAGCTGCCCACTCCGCAGCCAGCAGGGGAAGATGCCAACTCCGGGCAGAGGGAAAGGTGATTCCCCCCACCCCCCCAACCTGCGGAGGAGCTGGGAAGACACTGGTCATGAAAGTTGGACCACTGGGGGATGTCTGCAAAGGAGGACCGGTCCCAGAGGCAGAGAGGAGTGCCGTCCGTCTTCTCCTGGATATACTCGCTTCAGACTCGCATTTCTTTTAAAACTCCCTGTCTGATGCCAGCCTGTAGGCCTTTAAGGAAGAGAGACGAAGGACCTCTCTGTGTTGCCCGCGTGCTGGGTCCAGGAGCGCCCCTCTCTTGGACCGTCGAGGCCGAGCTGCTAGGTGTGGCCTCTGCTAGGAGCAGGGCCCTGGAGGAGAGGGTCCCTGGGAGTGGGAGGGCCTTCAGAGAGTGTCGTCCCTGGGGATCAGAGACTCTGTGCACCCGCAGGCTCCCAGGTCACTGTGACCAGCGTTTCCTCTGGGGCAGCGAGAACCTTGAGCGTAGGGGTGCGGTGAGGGGACAGGCCAGCCCGAAACTCTGAAGGCAAGGCCGTGTCTGCAGGTCTCACAGACACCGAGAGGATGCTGTGGCCCCGGGCATCAGTGGCCTGAATCGTGGCCTTCAGTGGGTCCGTGCCTTGGGCACTCGGGGTTATTTAGGAGCATCTGGAAGCAAGAGGGGATAAGTCCCCTGGCCATGAGGGGTAGAAGCTCAGACCCGGGCAGGGACGGGGCCGGAGGGGAGCAGGCCAGATGGGACATTCAGGGCCCACCAGGGGAGTCCTGGCCAGCAGGCAGGCGGTGAGGCCACTCTGTCCCTGGGGCCAGCAGGACGGGCCAGGGGGTTGAGGGCCGAGGCCAGGGTCACCACACACTTTGTGGGCAGGCTTTTATGTTTCTCTTGGCAGATTTTAATAACTTTTTATTTTGATCGTACCGTAGAATGCTACATTAGTGTGAGCTAAACTGAACTTGAAGCTTACTCATGAAGAAGCAATGCAAGAAACAGAATAATACACCTTCTATTTTGTAGGGTAGCCCCTGGTTCTCTAATGCTGAAGAGTAACGTCATGGCAACACTATGCACGTGTATGACACAACCTCAAAATCATGCTCTCTAAATTACGTCAATACCATGGGTTTTTTCCCCCAAAATTGATACAATGTTTAACATTAGTTTTAGTCAAAATTTTCTGTCTTTTCTCTGCCGAAAGCCCTTAGAAGTTTAATGCAGTCAGGATACAGGTGAGGAAGCATTTTCTGAGTACCTTCTCTAGCCGGGTGGAGGGATCACTGCAGTTCGGTCCTGGTGAACTCAAGAGACTCTGCTCAGGAGGAAGAACGTTACTGTCAAGTTTCTCTAACTGACAGAGAGAAATCGCTGTTTCTTCTCCTCGCAAGATGTTTTCCGACAGTGGATTTGAACGAGAGCGTCACCAACACACTCATTCCGCCTTCAGTGAATTTAACTCCCTTCCTTTCTGTCTGCCTAAAGTCATCTTCTCTCTCTGTCTCTCTCTCTTTTAAAATTATCCTACATCTTTAAACCTCATCAGTTACCTCGTTTAGACCTAGGGACCTGGCATCCTCGGTCAGCATCAGGTCTCGTACCATGCTGTCCGTTTTTCAGGAACTCGGAAAACCACCGTCTTTCTCCTCCCAGCTCTGATGCTCCCGGGCCGGCCCCTTCCCCGGCTGTTCTCATACCGCTCTGCAGGTCGCTTTGCCGCCAGGGCAGATGATGAGACAGTTCGAGGTGGAGAAGCAGAAAGTGCCGCGAGTGATTTAAGGGACTGTCAGCTTCCCGCGCTGCTGGGGGCGGGGGTGGGGGGTCAGCTGCCTCGTCTTTGTCTCTGCTGAATGCTCTCTCCGGGGAGTAGCCAGGCCATTCCCAACACCCCAGGGTTTGTGTCATCTCTCTGTTTTGGCCCCTCTTGCCTCCAGGACAGCTTTTTTTTTTTTTTTTTTTAAACTGCCTTTTCTGCTTGTGGTACTAGTTTTTAACCATCCCACTGTCTCAAACTCGTTTATTCACTGTATTTTATTTGAGCGCTTCTATATGTGCTGGACAGGATATTGGGTGCCAGAGACAGGTGAACAAAACAGGCCAAACCTCAGCTTTCACACGAGCCAGTGGTAGAGAGCGGACAGGCAGTGGTGGGGAAGGGCGTGCGTCTGGGGTTGGCACCCAGCAGATCGCCTTCTGTTCATCTTCTCTCCGTCACCTTTGGGAACCCGGGCACCCGTCAGTCCTCCCAAGTGGCCTGTAGAGGTCTTGTGTGGGTGCCCATCATGATGACACCTCGGGCACCATCTGGTTTGTCCTGGTCTCTAAAATTCTGGTTTCCTGTTGTTTTGAGCAGGAAGGTGTTCTTTCCTGAAAAGAGGGTTCTGCAGTCGGCCACGTCCTGTCACAGCTGAGCTGTTGATCTGATCTTTTGTACAATTCCTGGAAGGCTGAATTTTCACAAGTACACCATCTTTATCTTCTTTTTTTTTTAATTTATTTTTGGCTGTGCTGGGTCTTTGCTGCTGCACACAGGCTTTCTCTACTTGTGGCAAGCAGGGGCTACTCTAGTTGAGGTCACCAGCTTCTCATCGAGGTGGCTTTTCTTCTTGCAGATCACGGGCCGTAGGGTGTACAGGCTTCAGTATGCTTCAGTTAGTTGCCCCGAGGCATATGGAAACTTCCTCAGACCAGGAGTCGAACCCGTGTCCCCTGCATTGGCAGACGGGTTCTTATCCACTGGACTACCAGGGAAGTCCTGTCTCATCTTTAAGACAGAGTTTAGTCACATCTGTTAGGAATCCCAAGGACACCATCGTCTCTTTAAATCTTGTATTGAACCTTGTGTTGAATCTGTCCTTGGCACACTTGCCAGAATCCTCATGCTGCTTCTTGAGTCCTTTTAACTTCAGTTTTTAAAGAGCTCCACCTGTCATGGGCACCAGAGCATCTGCTCACTTGGCAATCACAGGTGTTACATGATGTCACTAAAGCACCTGATGTCTCATGCATGCCACCTGGGCACCAAGTTCCTCTCCCACCTCCCCCTTTCTCAGTGCAGTAGTCCTTGTCGACTCTCCCCAGGGAGACATCATTCCCACCCCTTACACATCTTTCAGTGGGAGATCCACCGGTTAGCAGGCCCAGTTAAGTACTTCTTCCTACCAACTTGAGAAGGAAGTTCCTTATCAGAGCTCACCCTGATCCTTTGAGTGAGGTTTTGTGTGAATGCCATTCATTTATCACCACAGTGAAAGAGAAGATCTGGAGTCTGGTCTGACATCGAAGATGTGAGGGGGGCCTTTGGGTCGTAGAGTTTTCTCCTCTTGGACGCTCTTTTCTCCGAAGTTGAACCACGGCCAGGCTTGGCTTTCCCGGGACTGTTCTCACTGTGTATCTCTGTTCTTCGGATCCTCAGGCTTGAGGTCATCCAGGGAGGTGGGCTGGTTCCGTTTTCACAGGCTTCTGTGGAAGGGCCGGGGGACAGCACACAGCACACCTGAAAGGAGCCTCTTTCTATTCTCTTGAGCTTTCTCTCCGATCGTTCACCTTCTGAAATCCCTCTTCTTCGTACTTCCCAGTGTTTCTTTTCCTTGGCCACCCTTCACCATCCTGGAGTAGTTTCTTCAGTTGACTGATCCTTTGGGTGAGGTTTTGTGTGAATGCCATTCATTTATCACCGCAGTGAAAAAGATGAACTGGTGGTCCTTTGGGTTGTAGGGCTTTCTCCTCTTGGACGCGTCTTTCTCCGAAGTTGGCCCGGGGCCAGGCTTGGGTTTCCTGGGGCTGTTCTCATTTGTGCATCGCTGTGTACACTGAGCTTGCCTGGAAGTAAGTCTCCAGGTGTCCTGTACAGATGAGCCAGAATTCCACCTTCCAGGGTTGGACCATTATCATTCTTTGGGTTTTTTTTAGACCATTATCTTTTAAACCAAAGAGTCTACTCTTTGTATATTTGGTTTTCTCTGTGAATCAGTGATTTCCCACGAGTAACTGGTTCCAATTCTTGTATCAGGACTTAAATCCTCTCTGTATTCATTGGAAAACCGCAAAGACAGCATCCACAGTGAGCCTCCCCACTGGAGCAGCCTTAACCAACACTTCCAGCCAAAGTCCCCACCCCGCTCACCTCACCCCCTGTTCTCAAGTGTCCGGCAGGTACAGTATTCCTTTTCAGTGTCCCGGAAGCTGTGACGGGGGCGTCCCCACTGACCTAGAAAGCATTACCAGTCGATTCTGCCACATTCTCAGATGCTAACTTTATGTAGTGTTCTTTTTGCAACGACCTATTTATTGAACCTATTTATATTTATTTAATTTTTACGCTGAAGTGTGTCCAGTGACAGTTGCACTTGCTTAAAGCACATCAGATTTGCTTTGGATAAACACCCCTGACCATTTTAAAACTGGAAAAGTTATACTGTATCCTTCCATGGGATGGACGCCTTACAGCAGTTTTGTCATTAAAGGGTGAATAATTTGGTCAGGGTGAAAATGTTAATTTTTAAGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTGTGCCATTGTGTCTTCTCTGTGGATGGTTAATTGTTTCATGGGTATGTGTTAATCGTGTGATACAATCCTCTTTGTGGAACCTAAAAATCCTCTTTTTAGCTTTATATTTTATAAACTGCCAGATTGTACAATTTTTACGTGTATTTTTAAAGGTTGATGATGTGAGGGTAATTATCTAAGTTAAACAGCCTATTTTTGTACCTCCTGTACAGTTTTATAACTCTGCTGATCAATGATGGCACCTTACGCTGAGCCAACCACAAATAAAGGCAGTTTTAGATTTGGAAGTCAGCTCCATTTTCTTCAAGACTTGACCACCACTCTCAGACCAGGGGGTCATGCTGAGCTGTCTTCCTGGGTAGGTGTCTGGCTGGTGAGGGAGCAGTGGGTTCAGTGGGTGGGAAGACTGGCAGGAGGGGTGTGTTTACCTGATGGTGTTCATGGCAGGGTCCCCAGGCTGGAGAG EMBV3_11328 TGGCCAAACTCTGGTAGTATTTATGGTAGCTGCCTACTGGGGCTGTCGCCCTGCTTCTGT Gene GeneID:505375|AES:NM_001128497:14_cdna Constitutive 0 NULL GeneID:505375 7 GENE AES NULL amino-terminal enhancer of split EMBV3_21073 TTCGTTTTAAGTTTCCAACACCATGATGGAACTCACACCTTTTTAGTAATTGGTAAGCTG Gene GeneID:527210|SLC39A12:NM_001076878:109_cdna Constitutive 0 NULL GeneID:527210 13 GENE SLC39A12 MGC139696 solute carrier family 39 (zinc transporter), member 12 EMBV3_22320 CCACGGACTACCCTTAGATGGACAGGAGAGAGTGGTGTTCCTGAGGGGTCGTTACACTGA Gene GeneID:507750|LOC507750:XR_084668:202_cdna Constitutive 0 NULL GeneID:507750 29 PSEUDO LOC507750 NULL similar to SAC3 domain containing 1 EMBV3_41043 GGGTTGCCATTGCCTGCTCCGAATTCTCCTTTATAGGTCCCTGCTATTGTATCCTGTGGA Gene BVT0102_205579 - 1 EMBV3_31940 GK000013.2:38554842-38575816 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03671 ACAACGAGGACGTCTGGATCACCAGGAAGGACTATGAGGAGAAGGGGGGAGGCTACCTCA Gene GeneID:100297865|LOC100297865:XM_002692460:503_cdna Constitutive 0 NULL GeneID:100297865 13 GENE LOC100297865 NULL similar to Actin-related protein 5 EMBV3_33173 GCCCCGGACCTTCTTTCCCCAACAGAGATCCCAAAGCGAAAAGCAGACCTATTTGGAAGT Gene GeneID:100335703|LOC100335703:XM_002691240:212_cdna Constitutive 0 NULL GeneID:100335703 11 GENE LOC100335703 NULL DH and coiled-coil domain-containing protein-like EMBV3_02720 CGGTTGATTTACAATATTGGTTTCCTGCGGACAGCCTCGTGACTCAATATAACACCATTG Gene GeneID:525898|KAL1:NM_001083705:14_cdna Constitutive 1 NULL GeneID:525898 X GENE KAL1 NULL Kallmann syndrome 1 sequence EMBV3_12966 CCTCAGGGAGGGTCTGGGTTCTACGTGTTCATCTCCTCACAGAGTCTACTAATGACCAGA Gene GeneID:613986|C23H6orf145:NM_001076932:244_cdna Constitutive 0 NULL GeneID:613986 23 GENE C23H6orf145 C6orf145 MGC151828 PX domain-containing protein C6orf145 homolog EMBV3_14188 CTCACTTGATGAACTGTCCAGCTTGGAGGTGATTTTTGTGTTCCTCAGGATGGATTCCCC Gene BVT0102_280602 - 0 NULL GK000023.2:41970214-42335195 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10585 GAAAAGAAAATTTGGCTTCTCTAAAGTTTCCTCGGGCCATCTTATCTGTACCTGAGTCTC Gene BVV0102_020548 + 0 NULL GK000004.2:55188427-55641899 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04174 TGAACCTCTCTATGTCTTGGCCTTGGAGATCCTCACCTGCTACGAAACCCTGAGCAAGAC Gene GeneID:539147|GEMIN4:XM_002695679:207_cdna Constitutive 0 NULL GeneID:539147 19 GENE GEMIN4 NULL gem (nuclear organelle) associated protein 4 EMBV3_14075 CTATGGAAGTTGATCCAAAGAGCTACCTAGCCTATGAAGGAAGAGCTGTGGTCTGTCTTC Gene GeneID:517396|LOC517396:XM_002696714:119_cdna Constitutive 0 NULL GeneID:517396 21 GENE LOC517396 NULL similar to tetratricopeptide repeat domain 6 EMBV3_42825 ACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAG Gene BVV0101_006691 + 0 NULL GK000008.2:88529463-88673820 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00020011 TCONS_00185886 TCONS_00071043 TCONS_00136895 TCONS_00251601 TCONS_00238893 TCONS_00251891 TCONS_00214738 TCONS_00115687 TCONS_00176254 TCONS_00141421 TCONS_00233559 TCONS_00156731 TCONS_00240534 TCONS_00090400 TCONS_00207366 TCONS_00022065 TCONS_00252354 TCONS_00020016 TCONS_00141380 TCONS_00210648 TCONS_00238326 TCONS_00250931 TCONS_00160991 TCONS_00223013 TCONS_00251452 TCONS_00201770 TCONS_00040584 TCONS_00007361 TCONS_00056147 TCONS_00187583 TCONS_00141629 TCONS_00079141 TCONS_00091802 TCONS_00185880 TCONS_00249282 TCONS_00231021 TCONS_00189806 TCONS_00199595 TCONS_00152647 TCONS_00250580 TCONS_00070810 TCONS_00175849 TCONS_00224114 TCONS_00230725 TCONS_00036946 TCONS_00148670 TCONS_00019962 TCONS_00198661 TCONS_00245928 TCONS_00048821 52 XLOC_131641 XLOC_010689 XLOC_111939 XLOC_042816 XLOC_083106 XLOC_154542 XLOC_145559 XLOC_154832 XLOC_130757 XLOC_069856 XLOC_106033 XLOC_085849 XLOC_143041 XLOC_095191 XLOC_147198 XLOC_055181 XLOC_125883 XLOC_012736 XLOC_155295 XLOC_010694 XLOC_085808 XLOC_129158 XLOC_144993 XLOC_153874 XLOC_097884 XLOC_136319 XLOC_154393 XLOC_123415 XLOC_024400 XLOC_002922 XLOC_033950 XLOC_113628 XLOC_086057 XLOC_048026 XLOC_056573 XLOC_111933 XLOC_152225 XLOC_140510 XLOC_115843 XLOC_121248 XLOC_092412 XLOC_153523 XLOC_042587 XLOC_105628 XLOC_137410 XLOC_140215 XLOC_021259 XLOC_090550 XLOC_010640 XLOC_120315 XLOC_150855 XLOC_028952 Coding TCONS_00223013 XLOC_136319 NonCoding NonCoding - 7:92166605-92167450 - TSS167011 845 1 TCONS_00223013_1 42 1.01420118343195 1 0 9.88644413762084e-05 0.000177284565412043 2.19030099897358e-05 0.000117967711632636 1.285419115155e-05 1.70290359147559e-05 3.69883347982911e-05 0.000132709942004618 1.15383999657716e-05 4.2854975008002e-05 1.69523627087688e-05 0.000186762592655985 9.3502663421495e-06 0.000121439362634576 3.67818699558392e-05 0.00289410309260668 0.00412401339629732 0.00754376524347487 0 2.93509206793039e-06 4.79010533804789e-06 0.00138222017738551 0.00182686326396122 0.00195144178450413 8.56834313205831e-05 1.09185897006997e-05 6.7250418070516e-06 0.000186371383055408 0.000303069987666269 0.000450184362023937 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 4e-132 475 97.84 0.327810650887574 0 noncoding ATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCCACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGAATCCCTATGATTCGAATGTTGTAGCGTTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTGTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTGTCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCACTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTTGTTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTAGTTTCAAGATTTTGGATCAATTTCACTATCATTATTCGGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGGGCATTTATCCTGTTCCTTTATCTGCTGAGTATTCCTCTGTCTCTTCATCTTGTTTAAATTGCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTCTGTGGAGTTCTCTTTATTGTGGCTTTTCCTCACTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTCCTTTCGAAGAGTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCCGGCATTCAGAAGTTGTTTTGTGGAATTTACTCGACGTTTA TCONS_00217976 TCONS_00217977 . 3' 122766 TCONS_00217976 TCONS_00217977 . 3' 123610 EMBV3_35907 GGACCTCAGAACTAGGCTCAAGGCAGCAGGACCGGATTTCTCTTTTATATGGTCATTGAG Gene GeneID:539036|RGS19:NM_001076915:1231_cdna Constitutive 0 NULL GeneID:539036 13 GENE RGS19 MGC142862 regulator of G-protein signaling 19 EMBV3_00507 ATGGTAGAGAGGTTCAAAAGGGAGCAGATATGTATACCTATGCATGATTCATATAGAGGC Gene BVV0102_146728 + 0 NULL GK000030.2:100229687-100346826 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35841 CTTGACCTCGCAGGCCGCCGCCCAGGTGGCCGTCCGGGCACTGATCAGGAGTGACCGGAA Gene GeneID:512125|MAPK15:NM_001046110:59_cdna Constitutive 0 NULL GeneID:512125 14 GENE MAPK15 MGC138052 mitogen-activated protein kinase 15 EMBV3_21089 GACCACGCAGGTGGCTGTGGGCCTGGCCAGATCTGAAAACCTCATCTACAAATATGACAA Gene GeneID:514660|TGFBRAP1:NM_001102008:26_cdna UTR3_Alt 2 NULL GeneID:514660 11 GENE TGFBRAP1 MGC152624 TRAP-1 TRAP1 transforming growth factor, beta receptor associated protein 1 EMBV3_08595 ACTTATTCCATAATTAAGTCTTCTGCTGCACGCCAAGCTCTGAAGGACGACCGACAGCAG Gene GeneID:100295672|LOC100295672:XM_002687846:206_cdna Constitutive 0 NULL GeneID:100295672 5 GENE LOC100295672 NULL similar to killer cell lectin-like receptor subfamily G, member 1 EMBV3_02917 GATGATACATTTTCCCTTTGGGACTGTGACTTCCTTGAGAGGAGCATCTATATCTTATCC Gene BVV0102_211595 + 0 NULL GK000006.2:44960534-45225601 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26296 GGGAAGATAACCCCAGACAGAGGAACAGCATGTATCAAAACCCCAAGGAAAGTGTGTAGG Gene BVV0101_049284 + 0 NULL GK000006.2:62661143-62877286 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18231 GAGCTCCCCCACCATGACTGGGTTCCCCTGGAGTTTTTAAATGTCAGAATTGTCCACACT Gene BVT0102_055638 + 0 NULL GK000020.2:43700191-44339042 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114002 TCONS_00114013 TCONS_00114012 TCONS_00114016 TCONS_00114000 TCONS_00114004 TCONS_00114001 TCONS_00114015 TCONS_00114006 TCONS_00114014 TCONS_00114011 TCONS_00114007 TCONS_00114008 TCONS_00114010 TCONS_00114005 TCONS_00114003 TCONS_00114009 1 XLOC_069156 Coding TCONS_00114000 XLOC_069156 NonCoding Coding - 20:43959527-43998843 - TSS85118 451 2 TCONS_00114000_1 44 0.656319290465632 3 0.988604858196617 7.1638820288086e-22 0.000335429347777561 0.00137943671186007 0.000912560176094937 0.00046959091480778 0.00151627534015726 0.000989667730311501 0.00018535900646573 0.000312615423735563 3.73313756745203e-06 7.39184729570553e-05 0 1.05780578414183e-63 8.96611727501895e-05 0.000421056858567154 0 0 0 0.000611800498783932 0.00153621488004127 0.0043324277887528 0 0 0 0.00173157963518926 0.00321071472427288 0.00400299816320071 0 0 0 XR_231109.1 LOC101906362 PREDICTED: Bos taurus uncharacterized LOC101906362 (LOC101906362), 8e-17 91.5 86.59 0.177383592017738 0 noncoding 0 0 0 0 0.145575061469835 0.487219176170874 -0.0334187722896674 0.661147366940146 CCTGTGGGCAGACTTTATTAAGAAGAATAAGAGCATGCTCTGACGCACTTCGAAATGGTTCCTCTTCTCCTGTTGCTGCTGAAAGCACAGGGGGATTTTTCTCTAGTACTTAAAGTGAGAAACTGCATGAGCTCCTGGAAGTAAAACTCACTAACCTGTGGGAGCTCCCCCACCATGACTGGGTTCCCCTGGAGTTTTTAAATGTCAGAATTGTCCACACTGAGCCTCCAGCAATTCGTCAGTTCCAGTTTGGTGTTCCTATTGCAGCTGGTTCTCTTGCCAGTTTCTGTGCATGAGACAGCTCAGGGCTCTATCAAGCCTACCTACTCTATATGACAAAGATAATCAGCAAATACACTTCAGTTGTTTCTAAATGTGTTATTGGTGAACAGAGGATGAAAATGAAAGAAATCATTTTAAAAATGAGGCTCACCTGTCTGTGAATAGGCAA TCONS_00115133 r 5' 1544109 TCONS_00115133 r 5' 1544109 EMBV3_42257 TTAAAGCTCTAGCTGAAGGCAAGACAGCATTCACCCCTCCATCCAATTCCAACTCCCAGG Gene GeneID:505579|C15H11orf60:NM_001075209:80_cdna Constitutive 0 NULL GeneID:505579 15 GENE C15H11orf60 C11orf60 MGC139434 chromosome 11 open reading frame 60 ortholog EMBV3_01510 CCAAGACTGGGCGAGAGCTTGAATTTTTCACTACTTGAGGAGGGGGGTGGGGATTGTTCA Gene BVT0102_113996 + 0 NULL GK000013.2:28419115-28425139 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07866 CCAGATACCTTTGAACCCCAAAAATTCTTCCAGACATCGGGCCTTGCTAAGATGTCAGCC Gene GeneID:100301381|LOC100301381:XM_002698149:582_cdna Constitutive 0 NULL GeneID:100301381 25 GENE LOC100301381 NULL similar to parvalbumin EMBV3_18442 TCAGATGGAGATGGAGGGAGCTATACTCAAACTGCAAGAGAAGATAGGATCTGAGGCCCT Gene GeneID:767904|MGC126945:NM_001076983:216_cdna Constitutive 0 NULL GeneID:767904 23 GENE MGC126945 NULL hypothetical protein MGC126945 EMBV3_11269 GCAGCAGTTGGACTTAATGTATTTCTTGAGGTAAGTCAGTAATGTTGTATGCTGCAGAAA Variant GeneID:514960|SRP19:NM_001034478:9_cdna 255^366 2 EMBV3_37079 GeneID:514960 10 GENE SRP19 MGC128826 signal recognition particle 19kDa EMBV3_01428 GAGAAACAGCTGCGCCCAGTCGCCTTTGCTCTCTTTCTTGCTGTGTCCACATTCCTTGAA Gene BVT0102_069056 + 0 NULL GK000011.2:584789-650276 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35205 CGGCAGGAGATAGACCTGCCAAGAATCAAGCACTACAAAGTGATGAGTGCAGGGAAAAAC Gene GeneID:507296|STAP1:NM_001077868:26_cdna UTR3_Alt 2 NULL GeneID:507296 6 GENE STAP1 MGC151890 signal transducing adaptor family member 1 EMBV3_32711 AATACTGCTGGCAAGAACTGGAAGCTTAGACAAGGCTCTGGGCATCTGGGAAAGCTCCTG Gene BVT0102_429196 + 1 EMBV3_17986 GK000021.2:23668525-23705959 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36756 TATCTTTTCCCAACTCCAGGCTTCAAACACCCCTCCTATCTACATCTGCTGCCAGGTTCC Gene GeneID:537659|TTC28:XM_002694620:173_cdna UTR3_Alt 2 NULL GeneID:537659 17 GENE TTC28 NULL tetratricopeptide repeat domain 28 EMBV3_10512 AAGAAGTCCCGCCAGGGAAAGAAGAGTAAGGCCAGGACGCAGGAGAAGTTTGCCAGGAAA Gene GeneID:618236|C22H3orf22:NM_001076497:53_cdna Constitutive 0 NULL GeneID:618236 22 GENE C22H3orf22 C3orf22 chromosome 3 open reading frame 22 ortholog EMBV3_40467 TCCCTGCCTTTCAACACTCCCGAGTACCTGAAGTCAACCTTCTCCAAAACAGACTCCATC Gene GeneID:536765|CASZ1:NM_001078010:88_cdna Constitutive 0 NULL GeneID:536765 16 GENE CASZ1 MGC155102 castor zinc finger 1 EMBV3_22515 CCTGCAGGCGGCCGCGAATTCACTAGTGATTAATCGAATTCCCGCGGCCGCCATGGCGGC Spike ESK1101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13037 GACTCTGAAGAGCCACCTGCGAATCCACACAGGAGAGAAACCTTACCATTGTGAGAAGTG Gene GeneID:539020|BCL6:XM_002684840:187_cdna Constitutive 0 NULL GeneID:539020 1 GENE BCL6 NULL B-cell CLL/lymphoma 6 EMBV3_06530 GCAGGCAGAGGATGGGCCAGCACAAAGACAGATGTTGAAAAAGTTATAGCAGTTGCCTGG Gene GeneID:616320|NHEDC2:XM_002688114:20_cdna Constitutive 0 NULL GeneID:616320 6 GENE NHEDC2 NULL Na+/H+ exchanger domain containing 2 EMBV3_04721 AGGTGCCTCTGATCTATCCAGCGAAGAGGGATGGAGACTCTTCAAGATCGACAAGGAGTA Gene GeneID:508861|SAT1:NM_001034333:11_cdna Constitutive 3 NULL GeneID:508861 X GENE SAT1 MGC127572 SAT spermidine/spermine N1-acetyltransferase 1 EMBV3_01539 TTCCAGATCTCGGCACATGGTTTTGTTTGCCAGAAGAGGAGAAACTTTGCATTCGAGTGG Gene GeneID:540183|TPST2:NM_001035429:77_cdna Constitutive 0 NULL GeneID:540183 17 GENE TPST2 MGC127125 tyrosylprotein sulfotransferase 2 EMBV3_37205 ACTGCAGGGGTCACAGGTTCAGTCCCTGGCTAGGAAACTAAGATTACGTGCATGCCATGT Gene BVV0102_358391 + 0 NULL GK000005.2:51331183-51369912 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15276 CTACATCAGCCTTGAAACAAGTTACTAAAGCTGCTGAAATAGTTCAAGAAATTGAAAATA Variant GeneID:514440|RAD18:NM_001035295:95_cdna 670^954 2 EMBV3_28175 GeneID:514440 22 GENE RAD18 MGC134015 RAD18 homolog (S. cerevisiae) EMBV3_03673 ATTGTGTCTTGTGAGCTTTGTCCACCCCTACCCCAGACTGCGTCTTCCATCTCGCATCAA Gene BVV0102_137014 + 0 NULL GK000014.2:29685647-29736443 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16733 CTCACCAACAACCTCAAGCACACTAGCAACTTCCTACCTCAGGGCCTTTGCACTTGCTAT Gene BVV0102_175875 + 0 NULL GK000017.2:57353339-57398013 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077530 TCONS_00077529 1 XLOC_047090 NonCoding TCONS_00077529 XLOC_047090 NonCoding NonCoding LOC100847806 17:57353796-57356082 j TSS57919 1682 5 TCONS_00077529_4 43 0.525564803804994 3 0.265207877461707 1.56571673220244e-06 0 0 0.000637992097220075 8.04820256767606e-17 2.12666924469089e-06 6.28019217923236e-44 0 2.55201148209757e-68 0.000512173783558444 1.73219378964384e-05 0.000230821756720679 0 2.29352228889696e-137 0.000113757266759313 0.00587199302463431 0.000478722054378529 0.000611622859647279 1.35937893256485e-49 0 0 0.000427462794671937 0.000215684864456138 0.00176754745303217 7.48783038045386e-220 0 0.000132163112491498 3.52781561429024e-253 2.28276461757087e-05 0.000153702114109544 XR_228305.1 LOC100847806 PREDICTED: Bos taurus uncharacterized LOC100847806 (LOC100847806), 0.0 2370 100.00 0.780618311533888 0 noncoding 0 0 0 0 NA NA -0.160879362150941 0.104428076412027 AAGTGAAGTCGCTCAGTCATGTCCGACTCTTCGCAACCCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCATGGGATTTTTCAGGCAAGAGTACTGGAGTGGGGTGCCACTGCCTTCTCCAGATCTTACCCTAAAGAACACCAATAAGGAACAGGCATCGGTGGAGGCAGGGAGGCCAGTGAAGAGGCTACTGTAGCTGTCCAGATGCAGAAACAGAGGCCCAGAGAGGCTTAAAGCTTGCCCAGGATCACATAGCTTGGACACTCCAGAGCTGACATTTGAACCCAAAGAAGAGCAAGTCAAAACCAGAACTGGGCAGAGAGCAGGGAAGTGAGCTGTGGCCTGAGAGGAAGCCCTTCTTGACTGTGTAGGCTGGTGAGATGAGGTGGATTGGGGATGGAGCAACTGCCTCTTCTGCCCTGGGTCAGGTCGCCTGTCTGGGCCCCACTGTAACCGGCTGCTCCAGCTGAACCGGAGGAGAGAGAGCCTCCTTTCCAGGAAAGCCTCATTCCTCCAGGTCCTGAGTAAGGCACTGCCCACTGGGGAACGAACATTAACTGAGCACCTACTGCACTCCAGCGACTTTATATACTTTGCTTCTTGAACAATGTGGCCACTGTCCTATGTAGAGTGAGGTTTTAAAGCAGGAGCTCAAGATGCATTTGTAGCGTGGCCATGGAAAACCCCAGGGGAGGGCGTAGCCACACTGGAGACTCATATGCCACCTAAGTCCTTCCTGGCCATCATATACTCCTTGGAGGGGAGTAGTAAAATCACTGTGGCCAAGTGCAGAGAGTTAGATTCCTCTGCTGCAAATGGATGCACAGTGCTCTCCCTCCGTCCTCTCTGACTTTTAAGAGTGAACCAAGTCCTGGGCCCTTTGTCTGGATTTTGTAACAATCTTTTATGCCACTCTGACTGCATCCCCTGCCTCTCCCCTTCCTCACTCTGCTCCAGCCTCACCAACAACCTCAAGCACACTAGCAACTTCCTACCTCAGGGCCTTTGCACTTGCTATTCCCTCTGCCTGGCATGTCCCAGGGGCTCAGTCCCTCACCTCCTTCAGGTCTCTGCTCAAATGTCACCTTCTCAGTACAGCTTTTCTTTTAGAATCAAACACACCTCTTGTCCTTAATACTTCTGATCTCCCCTCCCTGTCTTATATTTTCCACACCACTTAAGCCCATCTGACAGATGCACCTTACCTGTTTGTTAATTGTGTACTCCCTTCACCTGCCACCAGCATATCAGCACCAGGAGGGCAGCGACCCTCTCTGTCTTGTTTACTGCTCTATACCTAATGCCTAGAACAGTGCCTGGCACACACTAGGTGCTTAATAAATGTTTGATGAATGAAGTCCCTACTGTCCTCTGAAATAGATTCTGTTCACATCCCTTTTCATGGAAGAGCAAATCAAAGCTGACATCAGCAGAGATGGAATCCGACCACAAAAGGTCAGCTGGCCTGGTACCCAGGGGTGATAGAATTAGCAGTGCCTGAAACTGAGGCCTGGGTGTGGATTTCAGCTCTCGGCCCAACTTGCTTTGTGGCCTTGGACCAGTGGACTAACTTCTCTGTACTTTGTTTCCCCACCTGGCAAACGGGTAAGGCTAGTCCGGACACCTAAAGTTTGTTTCGAGATTAAATGAGTTCATATATATAAAATGCTTGGCAATGTCC EMBV3_17330 CCACCCAACCCGACCTATAGAAACATCTACTGGACCACCAGGGGATGTTGCAAACCAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40202 ACTGTATTGCTGTTTACATGGATGTTTTGTGCGGGTGCTTTTACGTGCCTTGCATCAGGG Gene GeneID:517825|TDG:NM_001083696:1031_cdna UTR3_Alt 4 NULL GeneID:517825 5 GENE TDG MGC140185 thymine-DNA glycosylase EMBV3_12436 CCATCCTGGGGAGGGAGTCTGAAGGAAGCTAAACTGCTGGAAGAAGGGAGATTGTTAATG Gene BVT0102_124325 + 0 NULL GK000018.2:55097797-55112227 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084136 TCONS_00084138 TCONS_00084140 TCONS_00084137 TCONS_00084139 1 XLOC_051469 Coding TCONS_00084140 XLOC_051469 NonCoding Coding GLTSCR2 18:55097038-55100422 j TSS63095 2844 2 TCONS_00084140_4 76 0.219760900140647 4 0.160508424475318 5.56354901189595e-08 0.000128945911418406 0.000260960461560275 1.94288762718938e-08 4.11311920657237e-37 6.400160993156e-15 3.6294338335878e-05 8.76063446598714e-05 4.7981187053226e-05 0.000151154632663722 8.40793094790299e-06 7.61383148213285e-14 5.9773687350757e-05 0.000129898008204455 1.01883311460786e-13 0.00156122476159038 0.000921169867009751 0.000100518177985727 2.6756371610566e-07 9.41550189549796e-05 4.65680678554054e-08 0.000155346664940592 2.79499677743704e-07 0.000687859813780899 4.48168415803741e-09 7.31448128821634e-14 9.35529818510253e-05 0.00025444490750144 8.90289641875141e-10 0.000459455372594133 NM_001038507.2 GLTSCR2 Bos taurus glioma tumor suppressor candidate region gene 2 (GLTSCR2), mRNA. 1e-93 349 100.00 0.0675105485232067 NM_015710.4 GLTSCR2 Homo sapiens glioma tumor suppressor candidate region gene 2 (GLTSCR2), mRNA. 5e-61 241 89.89 0.0622362869198312 0 noncoding 0 0 1 1 0.0420188775751801 0.743420062982245 0.00354103868251973 0.951647070162621 GCCACCTCCTCAGGGCTGGTCCACGGCCCGAGGGCAACATCCTCCGTGACCGGTTCAAGAGCTTCCAGAGGAGGAACATGATCGAACCTCGGGAGCGAGCCAAGTTCAAGCGCAAGTACAAAGTGAAACTGGTGGAGAAGCGGGCGTTCCGGGAGATCCAGTTGTAGCTGCCAAGAGACGCCGGAGCCCCACCCCACAATAAAGCACCTCCTGACCAACCCCTTGCTACCTGTGACTCGTGACTCGTCTCCCTTCCGGGGGCAACTGCTACCCCTGCCCGCCCTGCTTAGCACGCAGGGATGTGGGTGCCAGGACCTCATCTCCACCGAAGCCTGGTGGGAAGCCAGGGCGGGCCGGCAGGCAGAGGAGACAGGCCTGCGGTGTGGGTGTGCGCTTGGGTTTCTGATGCAGGGGGTGGCTATCCAGTGGTGGGGAGGCAGACCTTGAGAGCACCCCCGTCACAGGGCCGGAGCAGCAGCTGACGTTCACAACCTGCCCGTCCTGCCTCATCCAGCCACCAGTTCAGGAGGCAGGAATGATCTGTCCCCCTTTTAAAAGTGAGGAAACTGATGCTCATCAGTAGGGGTTAATCCTCTCCTGCCACCGTAAAGGACTTTTTCAAATCTTTATCCTACAAGTAGTAAAGTGTGGTCTCACTGTAAGTCGTCACTGTGGTTCATAAATGTACCAGAGAAAGGGTGAATATTGCCCTTGACCTTTGACCTCCATTCCAAACCTCTCTGCACAGGTAGCTAGCTTTCTCTGCAGTTTGCTGTGAATGGCTCCACCCTGTGTGAGTCTATTAAATTATATACACAGGTGTCAGAAAATAGAAGTCTTCATTTTTCTGCATTTTGGATAGGATGATATTCATGTGGTTCTATAATTTGCCCTGTAGCACATGTTGGGGAATTTTCTGCATCTGTGTAGGCTCATCTTTATTGTTTTCCACAGCTGCATAGAATTCCACTCACCCAGGCCCATATTACTCCTGGTGAAGCTGGAAGGGGATGGCTGTGTACCTGTGCCATTTCACCTGAGTTTGTAGGACAAGTACCTGGAAGTGGATCTCTGGGCTACAGGGAAAGTGTCTAAAGGGTCGTTTGGATTCAGCCACATTGCTCTCTGCGTAAGCTGTGCTGGTGTTTGCCGAGGTGCCCCCTTGCTTGCTCAAAGCTCTACTACTGTGTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGCGCGACCCCACAGACGGCAGCCCAGCAGGCTCCGCCGTCCCTGAGATTCTCCAGGCAAGAGCACGGCTACTAACTACTACCATACAGCCTCATGAATTTTTGAAGTTTACTGTGTGATTACCAGTGAGGTTGAGCAGCTTTTCAAATGATCACTCGCAGTTTTTTCCATGCTTCTCCAAACCTTTGGGCTGTTTTCCTCTTGGACTGTTGTTTATTTGTAGTAGCTGCTTGTTTATTACGGATCTGAAGACTGTCATACATGTTACAAACATTTCTCCCAGGCTCTTTGTTTTGACATCATGCATGGTATCTTGCCAGAAGTGCTTGTTGCTTTTTGCTTTTCCTTTAGTCTTCCTCTGTTTTTTGTTGTTCTTCTTTTAAACCACAGCCTTTAGGCGGATTGCTCCAGGACAAGATGTTTATAAAAATAGAGCAGGCAATTTATAAAACATGGCTGCAGGGAGAGACTAACGTCAGAGCCTCCCCTTCCCCTGACATCACGATTTAAGGGTTTCTGCTGTTCCTCCCCTTCTGCCATCTTAAAAATAGAAAAGTGTGTTGTACAGACAAACAACTCTGTGTGTATATACAGGAGGGGTCAGTGAGGGTAAGTTGAAGTGAAAATGAAAGCCACGTCTGGTAAAGCCTTAAGCCTCAGCCTTTTGACCCAGTAATCCATCCTGGGGAGGGAGTCTGAAGGAAGCTAAACTGCTGGAAGAAGGGAGATTGTTAATGTCCATAAATGGCCCGCGGAGCATCTGTCTGGTACTAGGACACCTGGGGGGTGGGGTGGTCCCGGCTACCAGAGGGCAAGTGTTGAGGTCTCAGGAAGTGCTGTTTAATGGCCCCGGGGGAATGTGTGTGTTCCTGTGTGCAAAAAAAAAACAAACCGGAGGTCAGCTGCAAAGACAATGTGGGTTTTCCTGCACGGAATTACATTTTCACTTCTGGTTTTTACATTAAAAGAAAAAATGCTGAACTCTAGTTAAATGATTTGCAAGCTGCAGTGATACAACCCCATGATCTGCAACTTCTTTTGAAATGAATAAAATAGTAAGGGGGAATAGGGGACAGATCAGGGAGGGATAGATATCTAGATTCGACTTCAAACAAGCTCAGGGAAACGTGATGGTGGAATCTAGGTGGCAGTCCCAGGAAAACTCTTGCCTTTACTGTCTGAAAATCTTCCTAATAATTATTGGGGGAAAGTACATTAGGATTTAGCATGATGCTGGTGAAGCTTAGGTTCGAGGCCAATTACTTGCACTAGTCCCTTTCAAGCTCCTACGCCTCCTCCTGAACTTGTAACTTGCTATTTTTCCTACAGTGAGTCCCCCAATTGTAAAAGGCTTCCAGCACCACAGAACCTGTATCTGCCTGATTGTGGTATAAAAATGGAATTAGCCCACCAGCTGGGTGATGACGGAATAAATGATAGTACACTGATACTGTAGAGTGGTCGTGAGTTGGCCTTCTAAAGCTTTAGCTACTAGGGGCTTCCCTCCATCCTTTACCACTACACTGCTGGTGGTGGTGGTTCTGTAGGATAGATTCTGCGCAGCCAACGCAGGGGGCGTGGTTTCATTCCTGGGTCCGGGGAACTAGATCCCAC EMBV3_10299 AGAAGTTCTACCTGTGTTTGTTTTCTGGACCTTCAACCTCTCTACCAGAGGGCCTGAGCG Gene GeneID:513878|WBSCR22:NM_001034457:170_cdna Constitutive 3 NULL GeneID:513878 25 GENE WBSCR22 MGC133842 Williams Beuren syndrome chromosome region 22 protein EMBV3_01714 TGATCACAGTGGGTGCAGCCTCCAAGGCACCCAGATGCTGTATGTGGTACGGGTTTCTCA Gene BVT0102_205596 + 0 NULL GK000025.2:8742624-9238386 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146151 TCONS_00146152 TCONS_00146155 TCONS_00146156 TCONS_00146154 TCONS_00146153 1 XLOC_089032 Coding TCONS_00146151 XLOC_089032 Coding Coding - 25:8907963-8995966 - TSS109355 886 1 TCONS_00146151_1 145 0.145598194130926 3 0.989966137133247 1.91843384422024e-07 0.000893952416661719 0.00149552156500602 0.000688271870375149 0.000278057048717033 0.000300162597586189 2.90832778033969e-07 0.0004364952295253 0.000452738303131364 1.3880863787489e-05 2.66428898021877e-23 0 9.44839019931182e-13 0.00317487496968695 4.77053289209922e-39 1.93191595972051e-44 0 0 9.52966393855808e-05 0.000868953063120921 0.00043995087429528 0 0 0 0.00040312685792945 0.00148858094891839 0.00010562018625582 0 1.29914429498246e-17 0 XM_003584013.2 LOC536445 PREDICTED: Bos taurus glutamate-like (LOC536445), mRNA. 0.0 785 100.00 0.489841986455982 XM_005255267.1 GRIN2A PREDICTED: Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate 2A (GRIN2A), transcript variant X1, mRNA. 7e-173 610 91.06 0.49097065462754 TCONS_00146151_1 sp|P35436|NMDE1_MOUSE NMDE1_MOUSE Glutamate receptor ionotropic, NMDA 2A; 1e-89 287 96.38 0.944827586206897 0 coding AAGCAGGGACCGTAAGTGGCGACTATGGGCAGACTGGGCTACTGGACCTTGCTGGTGCTGCCGACCCTTCTGGTCTGGCGCGGTCCGGCGCAGAGCGCGGCGGCGGAGAAGGGTCCCCCGGCGCTGAACATCGCAGTGCTGCTGGGTCACAGCCACGACGTGACGGAACGTGAACTGCGAAACCTGTGGGGCCCCGAGCAGGCAGCCGGGCTGCCCCTGGACGTGAACGTGGTGGCGCTGCTGATGAACCGCACGGATCCCAAGAGCCTCATCACGCACGTGTGTGACCTCATGTCAGGGGCACGCATCCACGGCCTGGTGTTCGGGGATGACACCGACCAGGAGGCCGTGGCCCAGATGCTGGATTTTATCTCCTCACAGACTTTCATTCCCATCCTGGGCATCCACGGGGGCGCATCTATGATCATGGCTGACAAGTTGTCCCCAGGTTTGGCTCCGTAGAACCAGGATCTTCCTACAGCGGCAGACTTGGTCAGTCCCTGTCCAGGCCCTGAATTTCAGGAAAGATTTCATGGGCCAGAAGGAAGGACAGAAGTTGGCTCTGCTGGCCCCTCTCTTGGCATTGCAGTTCCAGTTTGGCTGGAGGCTGTGTCCCCTCCCTGGTCCCTCACAGATGTGATCACAGTGGGTGCAGTCTCCAAGGCACCCAGATGCTGTATGTGGTACGGGTTTCTCGGGAAGTGGCCCGAGTCCTCCTCCTCTAAGATTTCCGACTTCAAACGTCTCCTCGACAATTATTTATTTAACGTGTGTTTTTAAATCACTCCCTTTTAAATTTAAGTACATTTGTTTTAAAAAAGCAACTTGGCATCAGAACCATAAATGGAAAACCAGTATCACTTCCTACAAATAGAAAGTAAGTGCA TCONS_00146144 TCONS_00146145 TCONS_00146146 TCONS_00146147 s 5' 165341 TCONS_00146144 TCONS_00146145 TCONS_00146146 TCONS_00146147 s 5' 165788 EMBV3_05290 CTCTCCATACAAATTGAGTATCATTATTAAGGAAACCCTTATGAATCCTGAAAGTTATGC Gene GeneID:538742|MIER1:NM_001076913:49_cdna Constitutive 3 NULL GeneID:538742 3 GENE MIER1 NULL mesoderm induction early response 1 homolog (Xenopus laevis) EMBV3_00298 GCGTTAAGTGCAATACGGATGACACCATCGGGGACCTTAAGAAGCTGATCGCAGCCCAAA Gene GeneID:614551|UBL5:NM_001037710:8_cdna Constitutive 3 NULL GeneID:614551 7 GENE UBL5 MGC127118 ubiquitin-like 5 EMBV3_42417 ACACTTCCAACTCTAGCTAGGGAAGGATATCTGGCGCATTTCCAGCAAATTCTTGGAACC Gene BVT0102_234522 - 1 EMBV3_00025 GK000006.2:73648430-73762654 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40674 TCACCTGGAGATCTTATTAGAGTTTGGTCAGTCTGGGAGGGAAGGGGGCTGGAGAGTCTA Gene GeneID:519027|KANK4:NM_001102053:63_cdna Constitutive 0 NULL GeneID:519027 3 GENE KANK4 MGC151838 KN motif and ankyrin repeat domains 4 EMBV3_17075 TTGCTGCCAACAGTGGCTTCATGAGCATGGGCACCTTCTTCCTGCTAATCCTCTCCTACA Gene GeneID:100140382|LOC100140382:XM_002690700:333_cdna Constitutive 0 NULL GeneID:100140382 10 GENE LOC100140382 NULL similar to olfactory receptor Olfr1279 EMBV3_39461 CTCGTCAAAATCACCAAGACTTCTAGTCAGCCTGTTGGTATTTGCCATGGTTCTCTGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14562 GAATAGAGCCAGGGACTCAACATCTGGAGAACAAAATTCTAGGAGACACCGAAGATGGAG Gene BVV0102_089929 - 0 NULL GK000021.2:14949981-15205585 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40229 AACAAGAAACCCACATTCCACCTCAGGACAACAGACACAGCTGCAGTCACTCACTTCGCG Gene BVT0102_197115 - 1 EMBV3_13178 GK000020.2:1-14601 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00050921 1 XLOC_031041 Coding TCONS_00050921 XLOC_031041 Coding Coding LOC100847880 14:14477-18623 = TSS38097 1135 1 TCONS_00050921_1 209 4 0.727141133896261 7.19244996536506e-05 0 0 0 0 0 0 5.21121103757732e-06 7.64682610380625e-05 0 0 0 0 2.7629945187751e-06 6.92967165200959e-06 9.30803145258216e-05 0 0.000154745774012674 0 0 0 1.96141027105392e-05 2.42486660948946e-05 0.00022155899354875 0.000109878952444132 3.1037395939832e-06 0.000529990039506583 8.46270772208622e-06 8.55437696920454e-06 5.29713697983464e-06 XM_001256523.4 LOC789904 PREDICTED: Bos taurus ribosomal protein L7a-like (LOC789904), 0.0 1287 96.78 0.682819383259912 NM_003626.3 liprin Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 5e-31 140 74.88 0.176211453744493 TCONS_00050921_1 sp|Q13136|LIPA1_HUMAN LIPA1_HUMAN Liprin-alpha-1; 7e-23 99.0 69.23 0.358851674641148 0 coding AGACCCTCTAAGCCACGAGGAAGACCTGGCTAAGGTGATCGACCTCCAGGAAGTCATAGACAAGCAGGAGCAGAGCCAGATGGAGGAGCGCCTGGCAGCCCTCTTTGCCCATGTGTCAGAGCTGAAGGAGGACCTGGACACGGCCAGGAAGGACCTCCTCAAGTCCGAGGACGTGAACAGGAAACTGCAGCAGGATGTCCACGAAGTGAGTGACGGCAGCTGTGTCTGTTGTCCTGAGGTGGACTGTGGGTCCCTTGTTCTCCCAGTGATCTCAGCCTTGGCATGGCTGTGTGAGCAAGAGCAGAGCTCTAGCGAGACCGCAACTGGCTGCCTCCCCGCCTCTGCATTGAGATCTCTGGGAGACCCTTTAAGCCACGAGGAAGACCTGGCTAAGGTGATCGACCTCCAGGAAGTCATAGACAAGCAGGAGCAGAGCCAGATGGAGGAGCGCCTGGCAGCCCTCTTTGCCCATGTGTCAGAGCTGAAGGAGGACCTGGACACGGCCAGGAAGGACCTCCTCAAGTCCGAGGACGTGAACAGGAAACTGCAGCAGGATGTCCACGAAGAGAGTCTGGTGACGTCTGTGGAGCCCGTTCTCTTGGAGAGATGGAAGCATGCTGTGTGGACTCTGCTGAGGCAGCTTTCCTGGCCATCTTCTCGAGTTTCTGAGGTTCCGCTCCTTGAAGGGATGTGTGACAGTGATACATGATACAGTCAGACAAGTCGAGTGATGTTTGCTCACCCTCAGATCTTCAGGCCCGAGCTGTGTGACCATGTGGAATCATGATGTTTCTGGCGGTCGTGTCTGCGGGTGTCATGATTTATGAGAAACTACCTAACGGTCACTGTGAAAACAGAAGAGTGCTGGGGGTTCAGGCCTCCTCCTGTGAGCCTCACCTCTCCTCTGTGCACAGACAGACAGCGCCCACCCTGCCCACCCCTCCCCCGTGAGACCGTCTCAGAGAGAACCCCTCCAACATGTGGTACAGCAAGTGTCCTTGTTTAGTAGCTTGGTGTGAGTAATTCCGCGTGAGAACTCAAAACAGAAATATTTGCACAGGTTTGTATAAGCTATTCACACTACTCTTTGGCAACAGGAGATTAGGTGGCAGAGTTTAATACATACAGAATTCTG EMBV3_03724 CTGAAACAGTTTACGAGTCACATACCCTCACTGAAAGGACTAGTGGAAGACACACTTCAG Gene BVT0102_082070 + 1 EMBV3_18725 GK000020.2:13006846-13391724 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116014 1 XLOC_070183 NonCoding TCONS_00116014 XLOC_070183 NonCoding NonCoding - 20:13133742-13135194 - TSS86482 1452 3 TCONS_00116014_3 60 0.898071625344353 1 0 0.000391471342780771 0.000264579591208389 0.000277237496418216 0.000399385045756191 0.00021002292128413 4.10042140599062e-05 8.03265219822687e-06 8.5950724858749e-05 0.00026717025929104 0 7.88288377723632e-07 0 0 4.62809153572449e-07 0 0 0 0 0.00028561975779137 0.000653765623658134 6.29540231002747e-05 0 0 0 0.000355012881957253 0.000398370331566484 0.000323625416339986 0 0 0 XM_005194808.1 LOC101905230 PREDICTED: Bos taurus uncharacterized LOC101905230 (LOC101905230), 8e-137 491 95.77 0.210743801652893 0 noncoding 0 0 0 0 -0.641142780198701 0.010893194083218 0.0471910947921008 0.339945895467611 AGGCTTCATGCGCCATAGAATTCCTTTTACAACTAACCTACTTTGAAGTTGTAATGCAAAAGCAGTCATAGACAAATATGTAAACAAATGGGCATGGCTGTGTTCCAATAAAATTGTATAAAAGCAAGCAATGGCAAGATTTTTGCCCCAGGTCATAGTTTACTGACCTTTGGCCAGAGATAAGAGATAAAAGTCAATATTTGATAAAAGAGTAGAGAATTTTCTTGAATTTTTAAATGCTTGACCTTTAGGATGAGGATGCATACAATGTCCAAAGTGATATAAATAAAAGTAAAGCACACTGAGTCACACAGTAATGAAGCTCCTGAATACAAGGATCAAGAGGAAAATTTTATCCACAGCCAGAAAAAATGCAGAGTATCTATAAAGGACCAGCTGATAGCACATTTCTCATCAAGAAATAAAATCCAAAACAAAAGGATCAAATCTTCACAGAATTGGGGAAAATAGTAGTCAATCTATAATTAGATACCATGAAAAACTATCATTAAAGAATGAGGGCAAAATAAAGACACTTTGAAACAAATTCTGAAACAGTTTACGAGTCACATACCCTCACTGAAAGGACTAGTGGAAGACACACTTCAGAAAGAAGGAAATTGAGTCCAGAAGGAAGGAATTGAGCCCCATGCTGAGAAGAGACTCATTTTCTGTGTGTAATTTAAACATGCTTTAATGATAATAAGTGATGTCTAAGATCTTAAAAATAAGACAGAACCACAATACTAGGCAACAATAATTTAGATTTTAAGTCAAGTCGTGCAAGTTAAGGGAAGAAACCAAAAAAAGAAAAAAAATGGAATGCTTAACTTCCAAAATCAATAAAAGAATTAAAAGTTAATTTTAAAAAAGATTAAATCCAATAGGAGTTGGAAAAGGAAAAGAAAGATTCATGGGAAAACAAAATAATAGGCAGAAATCAATTCAGATACACAAGAAACTGCATCAAGTGGGTTTAAAAGACAGAAGTTCTCAGGTTTTTTTTTTTAAATATAACAACAAAATCAAATCAGGAATAAGAGTCACACCTAGAACTTAACACAAAAGGTTTAAAAGATGGAAATAATAGATTAAGGAAATGCTAATAAAATAGATCTGTGACAATACTATTTTCAGACAAACTTTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCACAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCCGTTGTCCCCTTCTCCTCCTGCCCCCAATCCTTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTTTTCCCATGAGGTGGCCAAAGTACCGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTG TCONS_00114562 . 5' 126888 TCONS_00114562 . 5' 126888 EMBV3_05745 ATCACTTCCCCTTGTAATGATTTCCAGCTGGACCGAACTTTATTGCAAAATGCAGTCCTC Gene GeneID:513750|TCFL5:XM_002692254:1553_cdna Constitutive 0 NULL GeneID:513750 13 GENE TCFL5 MGC137754 transcription factor-like 5 (basic helix-loop-helix) EMBV3_17456 GGATGACGGCCTGGATGAAGCATTTTCAAGTGCCTCTCGCCTGTCGACTGGGACAAGCCT Variant GeneID:511199|LDLRAP1:NM_001083668:132_cdna 882^954 1 EMBV3_22698 GeneID:511199 2 GENE LDLRAP1 MGC157309 low density lipoprotein receptor adaptor protein 1 EMBV3_33667 TCCTAAACCCCATCCTCACACTGTCAACGAGTGGCTGCAAGTTCCCGTCAAGTCTGACAT Gene GeneID:614539|PEX10:NM_001076333:189_cdna Constitutive 0 NULL GeneID:614539 16 GENE PEX10 MGC143025 peroxisomal biogenesis factor 10 EMBV3_37600 AAGAGTGACTACTGTAACCTGCCCCTGTATGCCAAGTCAGAGGCCTTCTTCCGAAAGGCA Gene GeneID:538739|DSCAML1:XM_002693002:187_cdna Constitutive 0 NULL GeneID:538739 15 GENE DSCAML1 NULL Down syndrome cell adhesion molecule like 1 EMBV3_25405 GTGTGGGAAAAGCCAGGTTTGTGCCCCGCTTCTGGCTCCGAAAAGTAGATGCAAGCCCTT Gene GeneID:788085|TMEM158:NM_001081626:175_cdna Constitutive 0 NULL GeneID:788085 22 GENE TMEM158 NULL transmembrane protein 158 EMBV3_16361 CGGGAGGCGGGGACAGCGCTTCCGGACCAGAGCTATGGGTTTCCCTGGAGGAACACCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35405 CAGAAAATCCACCAAATCACATCTTGTTCCTTACCAACCTGCCGGAAGAGACCAATGAGC Gene GeneID:509802|SNRPA:NM_001046039:577_cdna Constitutive 2 NULL GeneID:509802 18 GENE SNRPA MGC137110 U1A small nuclear ribonucleoprotein polypeptide A EMBV3_13384 AGAAAATGTCATGAATGATTTTTTTCCAGTCCTGCCATATGTAACACTGAGTCTGTTACC Gene GeneID:100300164|LOC100300164:XM_002691379:257_cdna Constitutive 0 NULL GeneID:100300164 11 GENE LOC100300164 NULL similar to MICAL-like EMBV3_00574 CACTTCAACTCCAAAGAGGAGCTTATCCAGCGCTACGTGGACGGTGGCATCTCAGACAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36711 CCACATCATGAAGTCGGCGGATGTGGAGAAGTTAGCTGATGAATTGCATATGCCGTCTCT Variant GeneID:540486|TIPRL:NM_001079615:8_cdna 283^402 1 EMBV3_05915 GeneID:540486 3 GENE TIPRL NULL TIP41, TOR signaling pathway regulator-like (S. cerevisiae) EMBV3_11842 CTGTGGATTTTAATTTAGAGAAGATATTAGAACAAAGAAAGTTTGCTTTTCATTCTCCTG Variant GeneID:514162|LOC514162:XM_002691888:24_cdna 637^996 3 EMBV3_11803 GeneID:514162 12 GENE LOC514162 NULL similar to aurora borealis EMBV3_20561 TGCACACCAGCTACCACGCTGTGGAGAAGGCTGGCTCTGGACTCAGTATCAGGTGGTAGA Gene GeneID:511837|NARFL:NM_001083411:141_cdna Constitutive 0 NULL GeneID:511837 25 GENE NARFL MGC143399 nuclear prelamin A recognition factor-like EMBV3_28280 GACTTCCATTCATTTCAGCTCCTCACATGCAGCTCTTTCCCATCCAGGGCTTTATTCTGC Gene BVT0102_019976 + 0 NULL GK000008.2:1175052-1267388 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224199 TCONS_00226715 TCONS_00224200 TCONS_00224202 2 XLOC_137473 XLOC_138068 NonCoding TCONS_00224199 XLOC_137473 NonCoding NonCoding - 8:1241912-1247732 - TSS168183 3366 1 TCONS_00224199_4 122 0.687462863933452 2 0.421893796184912 0.00341458576315861 0.00231433258524579 0.00122626261515822 0.000304234994558936 0.00103744194841379 0.00028779847593635 0.00122135900439465 0.00110711745041068 0.000799441935578137 5.08778160632084e-06 5.20302469589687e-33 0 1.53142841118647e-05 4.30464451709108e-35 1.36321915223952e-05 5.01249716034204e-22 0 0 0.00356423153116313 0.00347315014905553 0.000861087784763452 6.35978551801368e-11 0 0 0.00312088183576014 0.00242448008888307 0.000307006462617185 0 0 0 XM_003582318.2 FAM184B PREDICTED: Bos taurus family with sequence similarity 184, member B (FAM184B), transcript variant X1, mRNA. 1e-127 462 85.12 0.120617944147356 0 noncoding 0 0 0 0 -1.20686112148648 0.0539022965514005 -0.0702461189666182 0.235924047272582 TTTGACTAATAATTACACGTGGTTTCACTTGTGAGAAATGTATATTCAGCCTGGATGCGGCTTCCCTGGTGGAGCAGGGGTTAAGAATCTGCCTGCCAAAACAGGGGACGTGGGTTCGAGCCTTGATCTGGGAAGATTCCACATGCCGCAGAGCAACTAAGCCTGTGCCACAAGTACTGAACGTGTGCTCTGGAGCCCAGGAGCTGCAACAACAGAAGCCCCCACAATGAGAAGCTGGCGCCCTGCAGTGAAGAGGAGTCTCCACTCGCCATAACTAGAGAAAGCCCAAGCACAGCAGCGAAGACTCAGCACAGCCCAAAACAAACAAAACTATTTTAAAAAATATTAAGCCTGGATCATAAATCTGCCCAAGGGTCTTTAATTGGGTATAATATAATTAAATGAGCACAAATCTCAGCAAAAAGGGGCTGAGGAAATTTTTAGGGCAGTGCTGAATGAGGAGAATCTTCCAGCCTGTTCTGTTTGTCCATGCGTCTGCAGCCACATCACACTGACTCTGGAACTGTTTAAGACAGAACGTGAAAGAGAAAAAGGGTGCCTGGATGTGTTTATTGTGTGTTCACTGAGGGCCAGACGCATGTTACATGCTGTCTCACTCAACAAGGCATTTATATGATATCTCATTCAGCAGGACTTTGAGGCGGCCCTATTTAACAGATGTACCGACTGAAGTGACCTGACCGAGGTCCCCAGGCTAGAAATCACTTCTTTCTGGAGCAAATTCCATCAGTCCACATGACTTCCTCAGAGTAGATTACTGTTTCATGTCTGTGACCTAAAGAAGCTTCTCATTTGTATTAACTGCCCCAAGTATATTCATAAAACATCCATTCAATGAACTGGACACCCCCGGGAAGCCAAGGAGAACTAGAGTCACTTTCCCAACTGTGGAGCTCACAGCTATGGAACAAGCAAGCGAGTTGCTCCCGGTGACACACTCTGGTTAGGTTCTGCAGTAGCTTGGAGAACCAGCAGCTCATAATCCCAATGAAAAACAGCAGCCTAGCACCCATTAGAGGGGGCAAATCCAGATTGCAACTCCTTCAAAGCCTCATTCCCAGAGAACTGTGATGATATAACTGGTTTGGTGGTTCCCTGGAAGACGCCTCTGGCAGGGCTGCTCTATTTAACCTGACTTAGAGCTCACTAAGTGCAAAGATCTTTTTTCCAAAAGCCATGTGTGCAAAAGGATCAGAGGCACTTCTTGAATGTCGTGTGTGCCTCAGGCAGTGGCCCATGGCTGGGGAGAAAAGGTGGCAGCAGTGGTGAAGAATCTGCTGCCAGTGCAGGACGCAGAAGACACACAGGCTTGCGCCCTGGTTGGGAAGATCCCCTGGAGAATGCCATGGACGGAGGAGCCTGGCGGACTACCGCCATGGGGGCGCAAAGGGTCGGACACGACAAAAGCGGTCTAGCACACAACTGAAGACTTAAAAGGAGCATCTGTGGGGGGCAGTCCACAGGGGCTCCGGACGCTCTGACATAGTCCTGGGAATTCGGAAGGTATGTGCCTGCCACGGGGCTGTGAACTATCTCAGGAAGATCTGAGAAGGCGCTAAGCTCTCACTCTTGCAGACAGTTTGATCCTTTTGAGGCTTACCTTCAAGTTGATCCGGTTAGGGTCAGAACAGTCTTGGGTCTAGGAAGAATTCTGCACTGCTACTGAGGTGGTGTATGGTTGTGAGAGTTGGACCATAAAGAAGGGTGAGTGCCGAAGAACTGATGCTTTCAAACTGTGGTGCTGGAGAAGACTCTTGAGAGTCCCTTGGGCTGCAAGGAGATTAAACCAATCAATCCTAAAGGAAATCAACCCTGAAAACTCATTGGAATGACTGATGCTGAAGCTGAAGTTGCAACATTTTGGCCACCTGATGTGAAGAGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGGGGGAGGCAGAGGATGAGATGGTTGGATGGCATCACTGACCCAATGGACATGAGTTTGAGCAAACTCCGGGAGACAGTGCAGGACAAGGGAGCCTGACCTGCTGCAGTCCATGGGATCACGAACAGCTGGACATGACTTAGCAACTGAACAACTGAGGTGATATTTTTCTGAGTCGTCTACCCAATGCCCCATGTACTGTCAGGTTTTTCCACTCCAGAAGGTGGGGACGCAAACGCTTCCTGGCCATCTCTTTGCTCCAGAGATTGTTCTACCTGTTCCATTCCAGTAGTACCTTCCCCGGAGTCTACACACACTCACGCACACACAGACACACACAAATCAGGACTAAGGTGGGGACTTGAGGGAAGACTTCCATTCATTTCAGCTCCTCACATGCAGCTCTTTCCCATCCAGGGCTTTATTCTGCAAGTTTCAGCCACCTTGGTGTCCTCAAATTCTCCACTCTGTCTCCTCATCCAAGGGAGACCAAGGGAGACAGTCTGTCTGACTCCCTCTCTGTACTGCATCCTCACAGCTTTGCCCAGGCAGTAAGCTGGGCAACGACAAGGTTCACTTCCTCTGCAGCCTTTCACTCAGAGATCATAGTTCTGTAGGGTTTTGTGGCCAGTGTCTGAACACTGTACTTTGTCTGTTTCTGAAGTCATTTAAGGAAGGGGGGTGTGAAGGTTAATTTTATATATTTACTTGAAGAGTGCTTCTGTGTGAGATTATGGTTAAAACCGGCGGACACTGAGTGTAGCATAGTGACCTCCATAACCTGCTGGGCCTCATCCAATCGGCTGGAGGCCTGAGGAGAACAGAGACGGGCCCCGCCAACCACAAGAAAACTCCTCCAGCAGGCAGACTTGAGATTCCGCCTGCATCACCAGCTTTTCTGGGTGTCTGCCTACCAGTCTTTGCAGCACTGACTGTCTCCAGTCTTCAGGCTAATGGCCTTAGAACTAGACCGGCACCACTGCCTTGCCTGAATCTTGAGCCTGGGCCACACTGCAGATTTTGTATTTCCTGCCCCCATAATCATGTGAGCCAATTTCTTGTAATAAACATGCTTCCTATCTCTTCTGATTCTCTGGAGAGCCCTGAATTTTACACAGGGTAAATCTATTCCTTGTTATTCCATCATGACTTGAACAGACACTCATGATACATTCTAAAGCTATGATAATTAAGACAGTTTGGCATTTATGCTTTGCAAAGAAATAATGGACATGCCTGTAATCTTGTTGAGTCCTGACTCTGCTGAGTGGCATACAGAACCAACATTTTCATATTAATTCTCTAGAATGTTTTCTGATGAATAACTTACAAAATTGCTATAATTATCATAAAATGTAGTCCTCTTATGCTTGATTTCCTTTCTAATCATTGGGGACACTGATTTAAGTATAAT TCONS_00226720 TCONS_00226721 TCONS_00226722 TCONS_00226723 TCONS_00226724 TCONS_00226725 TCONS_00226726 TCONS_00226727 TCONS_00226728 TCONS_00226729 TCONS_00226730 TCONS_00226731 TCONS_00226732 TCONS_00226733 TCONS_00226734 TCONS_00226735 TCONS_00226736 r 3' 18438 TCONS_00226720 TCONS_00226721 TCONS_00226722 TCONS_00226723 TCONS_00226724 TCONS_00226725 TCONS_00226726 TCONS_00226727 TCONS_00226728 TCONS_00226729 TCONS_00226730 TCONS_00226731 TCONS_00226732 TCONS_00226733 TCONS_00226734 TCONS_00226735 TCONS_00226736 r 3' 24257 EMBV3_17546 TGGTGTCCCCATGGTGTTATTCATAGACCTGGAAATGCTTCTAAGAGCCTGTTTGGCTGG Gene GeneID:536775|CNTNAP4:XM_002694731:92_cdna Constitutive 0 NULL GeneID:536775 18 GENE CNTNAP4 CNTNAP5 contactin associated protein-like 4 EMBV3_25287 CAGCCGGCGGGATGCGATCGTGGCCGAGCTGGACAGCCTGGAGTGCATGGCCATGACAGT Variant GeneID:338085|COPE:NM_176673:24_cdna 332^448 3 EMBV3_13363 GeneID:338085 7 GENE COPE MGC133960 coatomer protein complex, subunit epsilon EMBV3_00436 GAGGCGTACAGCTTCCCCTGTCATCTCTGTCCCAGGATAGCAAACTTGTTTATATTCAGC Gene GeneID:536760|DENND4C:XM_002689565:22_cdna Constitutive 0 NULL GeneID:536760 8 GENE DENND4C NULL DENN/MADD domain containing 4C EMBV3_13862 AGGCTGTCACGAGCCCAGGGGACGTGCATGTCACTGGTCACCTGTTCAGGGTCTGAATAA Gene GeneID:517357|FBXW5:XM_002691705:63_cdna Constitutive 0 NULL GeneID:517357 11 GENE FBXW5 NULL F-box and WD repeat domain containing 5 EMBV3_30773 AGGAGCAGAGAGTCCCATAGCTGTCCTGAGATTCCAAGACAGGAGAGACAACAAGTAAAC Variant GeneID:533574|ZFAND1:XM_002692835:198_cdna 139^358 6 EMBV3_01987 GeneID:533574 14 GENE ZFAND1 NULL zinc finger, AN1-type domain 1 EMBV3_28359 TGCTTCTTGCAGTTAGGGTCCAGACATAGTTTTGAGCAGTGGGTTACGTGCAGAGGTCTC Gene GeneID:100126179|ZNF75A:NM_001109965:10_cdna UTR3_Alt 2 NULL GeneID:100126179 25 GENE ZNF75A MGC155127 zinc finger protein 75a EMBV3_40340 AGTACTGGAGTGGGGTGCCTTCTCCAGATAATCAGTTTGTAGATAAGTTCCTCAGCCTTC Gene GeneID:505624|FBXL21:NM_001034252:10_cdna Constitutive 2 NULL GeneID:505624 7 GENE FBXL21 MGC128882 F-box and leucine-rich repeat protein 21 (gene/pseudogene) EMBV3_14944 AAGAGAGGAAATCCAAGGTGTCTGGGCAGCTGACATTTTCACCCATCAACCCACTCAAGG Gene BVT0102_297481 + 0 NULL GK000024.2:37597365-37673539 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28507 CTGCTGTGCTCACTGGTGCAAAGAGAAGACCAGGGCAGCTTAAGTGGTCTAAGAACCCTT Gene GeneID:541175|DUSP10:NM_001034725:98_cdna UTR3_Alt 3 NULL GeneID:541175 16 GENE DUSP10 NULL dual specificity phosphatase 10 EMBV3_19857 CTCCCATTCCACATCTCTGCCTCCAGCTTGCCTCTCCCAGTCCTCCTCCATATTGCCTTT Gene BVV0101_003589 + 0 NULL GK000003.2:100338716-100351374 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179620 1 XLOC_109392 NonCoding TCONS_00179620 XLOC_109392 NonCoding NonCoding - 3:100340304-100341665 - TSS134379 1361 2 TCONS_00179620_1 60 0.447465099191771 1 0 0 0 0 0 0 0 0 0 0 6.04628017843505e-06 0.000664384116292589 1.05089765152701e-05 0 0 0 0.000465744148743559 0 0 0 0 0 0 0 0 0 0 0 0.00014114878696359 8.32285816484467e-06 8.83504660775519e-06 XR_232132.1 LOC101906317 PREDICTED: Bos taurus uncharacterized LOC101906317 (LOC101906317), 2e-43 181 77.35 0.161645848640705 0 noncoding 0 0 0 0 -0.535327315947084 0.0198761958574634 -0.29536205432537 0.019436059149452 TTAGAACACTACCTGGCCCGTTGTAAGGGCTCAATAAATGTTGATTCATTGTTATTTTAAGCAGAGTCATGATGCAAGTGTTTTGGAAAGGCAATATGGAGGAGGACTGGGAGAGGCAAGCTGGAGGCAGAGATGTGGAATGGGAGAGCGGGGAGACTTGAGAACACAGCAGGGAAAGGTTTCCAGGGCTCCACCTGTATTATTAGAAAAGCATCTGTAACTCAACACCACACCATTCCAGGAGCCAAAACAGCATGTCCCTGCACTCAGATGTGTGTTCATATTTGCAGTCACTCAAGCAGGCCCTGATGGGTTTCCTGAGCAGGATCTGGGTCTTCACCCACTAACTGGTGACCTTGAGCAAGTCATCCTTCTGTATCCTCAGTTGTTGAGTGGGAAGACAGGTGAGTATCCTGCCAAGTGCAGTTGGAGGTGGGGGCAGGGCAGAAAGGATGAGGGGGAGAGCTTGCTGAAGGCAAGGAAGCTTCTCAGATTCCAGAGGGTTTGAAGCCTGTCTTTGTTCTAGGGTGAGAAGAGGGAGTGTGGTCTGGTTCTCAGCAACTGCTCCGCTTTGTTTCCCTTCATTTCTGTGAGCCTTTCCTCAATACAGAAGGGGCAGACAGGAGTAGGGCACAGCTTGCTCTCAGGAGCTCACAGGCCCACAGGTGACACAAGATTACCACACTCAGAAGCACTACCTGTGGAGCATTTTATAATTTTTAAAGCACGGCCAGGTCTTTGGCCTCTGTTGCCTGAGCCCCTCACCACCTCAGAGGTGGTTCTATTATACTATTATACTCTCCTCAGAGGTAGGGGAGAGTTTGTCTTCTCTGGTAAATTCCTTCAATCCCACACCTTTCTGTATCTCTGCTCTGTGCAAAGGGCTCCTCCGTCCCTTCAGAAGGGAGCTATTTCCCCACCCCTGCAAATCTGAGCTGAACTTTGTGACTTGTTTTAACGAACAGAATGCAGTGCACAGGATGTTGTGCTAGTTCTGAGCCTAGGCTATGTCAGCTACAAATTGGCACTTGCCTTTGGCACTTGCCATCTGTCTCTACAAAGATTAAATTGTGAGCCACTGCAGCTGCAGACTTTCAACACCCCTTGAAAGGAATTCAGAGGGGAGAGCAGAACTGAGGTGCTCCGGGGAAAACTGGCAGAACAGGTCTTCAGATAGTTATTTTCAGGAGCCAACTTTATGAGCCCAATTCTTGTATTTCCTCACATCTGTTCTTTTTCAATCACTAAGTCATGTCCAACTCTTTGCGACCCCATGGATTAACAGCATGCCAAGCTTGAGTCGATGATGTCATCCAACCATCTCAACCTCTGTCACTCCCTTCATCTCCTGCCCTCAATCT TCONS_00174224 TCONS_00174225 . 5' 1590 TCONS_00174224 TCONS_00174225 . 5' 1590 EMBV3_27801 AACATGCGTGAGTGTGCACGTGAGCTTGCACGGCGAGGTGTGAGCGTGTGTGAATGTATT Gene GeneID:536682|TMEM179:XM_002696788:504_cdna Constitutive 0 NULL GeneID:536682 21 GENE TMEM179 NULL transmembrane protein 179 EMBV3_27951 TACAATTTCCTGATCGGAGAAGATGGGCTCGTGTATGAGGGCCGGGGCTGGAACACCTTA Gene GeneID:282305|PGLYRP1:NM_174573:53_cdna Constitutive 0 NULL GeneID:282305 18 GENE PGLYRP1 PGLYRP peptidoglycan recognition protein 1 EMBV3_08357 GCCCTCTATCTGGGCTCTCTGATCAAAGAGGTTGGGAAGCTGGTTAAGGAGGCGGCCTCC Variant GeneID:507093|ALDH1A3:XM_002696517:121_cdna 742^855 3 EMBV3_03572 GeneID:507093 21 GENE ALDH1A3 NULL aldehyde dehydrogenase 1 family, member A3 EMBV3_12991 GGTCCATCCATTTCCCTTATCCAAAAAATCACTGAACCTTATCTTGAGAAGGCGCTGGAG Gene GeneID:539082|DDI1:NM_001078020:20_cdna Constitutive 0 NULL GeneID:539082 15 GENE DDI1 NULL DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae) EMBV3_14093 TATTTCTGCTGAGCTGTCCCTGGATTCAGGGATCTGATCCAGACCCCACACTAGCAACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40445 CTGGGGGTCCTGAGGTCCAAGGAGAAGGTGGAGAAGCTCCCTGCTTACCTGGCCACCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13792 CCATGTCTACCTGAAAGAGAAGGAATACAGCGACTGCGCCTGGGAAATCGTCAGAGTGGA Gene GeneID:619092|LOC619092:XM_002689531:178_cdna Constitutive 0 NULL GeneID:619092 8 GENE LOC619092 NULL similar to interferon-tau EMBV3_03333 GGGACACCTAATACAGAGGAAAAAAGTCCATGTCTTTGGGGACGAACTGAGTCTGGTGAC Gene GeneID:100337484|LOC100337484:XM_002692008:136_cdna UTR3_Alt 2 NULL GeneID:100337484 12 GENE LOC100337484 NULL tumor necrosis factor (ligand) superfamily, member 13b-like EMBV3_02795 TCCCATGCGCACACAACTTACAGATGGGAAAACTGAAGCCCAGTCAAGGCAAGCATCTTG Gene BVT0102_017019 - 0 NULL GK000026.2:18871718-19180538 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21739 ATGCAGGGAATACAGGTTCAGTCCCTGGTCCAGGAAGACCCAACATACCATCCTTCAAAC Gene GeneID:100336412|LOC100336412:XM_002696417:10_cdna Constitutive 0 NULL GeneID:100336412 20 GENE LOC100336412 NULL ZAR1-like protein-like EMBV3_13548 CCAGCTCTGTGGTCTGCTGGTTCTGGTGTCCTGGATTATGAGTGCCCTGAATTCCTTGTT Gene GeneID:513732|LOC513732:XM_002688688:139_cdna Constitutive 0 NULL GeneID:513732 7 GENE LOC513732 NULL similar to Olfactory receptor 7A10 (Olfactory receptor OR19-18) (OST027) EMBV3_17088 CCCCTTGGACTTGAAATACTATCCCTGTATATTGCATGAATGAGAGACTTCCCCGTATTT Gene GeneID:613575|CNIH:NM_001034739:119_cdna UTR3_Alt 1 NULL GeneID:613575 10 GENE CNIH MGC139328 cornichon homolog (Drosophila) EMBV3_27450 GAAAGAGGAACACAGGAAAATTAATTTAGCTTGGTGGGGATGAACCTAACTAAAGGGCAG Gene BVV0102_386174 + 0 NULL GK000004.2:52235916-52446142 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27263 GACAGCAGAGCCAAGAATGCTGGAGTTACGATCCAAGACACACTCAACACATTGGATGGC Gene GeneID:511043|LAMC2:XM_002694208:52_cdna UTR3_Alt 2 NULL GeneID:511043 16 GENE LAMC2 NULL laminin, gamma 2 EMBV3_15721 GTCATGGTGATGCCCAATCTCTATGGCAACATCGTCAACAACGTCTGTGCTGGGCTAGTT Gene GeneID:614145|IDH3G:NM_001076313:76_cdna Constitutive 2 NULL GeneID:614145 X GENE IDH3G MGC139826 isocitrate dehydrogenase 3 (NAD+) gamma EMBV3_04131 TTATGTCTACAGGACAGAAGATACTTTGCTTTCCCCCAGGAGATGGTCGAGGGCAGCCAG Gene GeneID:100336885|LOC100336885:XM_002683979:2_cdna Constitutive 0 NULL GeneID:100336885 Un GENE LOC100336885 NULL interferon-tau-like EMBV3_21991 AAGGTGGAGACCTGAATCAGTATGTCCTGTCCCCCCGAGGTAAAGAGGGCAATCCAGACA Variant GeneID:540979|STK35:NM_001113768:1252_cdna 590^778 1 EMBV3_30282 GeneID:540979 13 GENE STK35 NULL serine/threonine kinase 35 EMBV3_33206 CTTGAAGGGAGATGATTGGTCGTAAGTCGTATGACTTCTGTGGACATGTGCCTGCAGACC Gene BVT0102_061026 + 0 NULL GK000001.2:59203331-59297290 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000789 TCONS_00000793 TCONS_00000795 TCONS_00000790 TCONS_00000798 1 XLOC_000194 Coding TCONS_00000793 XLOC_000194 Coding Coding QTRTD1 1:59179952-59207243 j TSS384 3688 1 TCONS_00000793_2 415 0.0273861171366594 10 0.865225357273727 0.00021700859027974 0.00214518159044709 0.000655190645746736 2.43130496224335e-10 5.18988323302586e-11 6.66424860896826e-26 0.000260860423469714 0.000653716695692842 0.000996432832894614 5.49926469467529e-05 5.3078814445571e-10 2.47465178444954e-05 1.71152107487576e-09 4.17673489727034e-15 2.11525071606265e-14 0.000216292268832624 0.00182340530807456 0.0017035312000294 0.00153941652108896 0.000583562153252891 2.87269981998161e-66 0.000184021472106815 0.00176468113548808 0.00055512274450096 0.00041995200465608 0.000465759333646181 3.28273647025174e-07 0.000145798704173378 3.22206716809861e-36 0.00026514785147514 XM_005201277.1 QTRTD1 PREDICTED: Bos taurus queuine tRNA-ribosyltransferase domain containing 1 (QTRTD1), transcript variant X1, mRNA. 0.0 5708 100.00 0.857917570498915 NM_001256835.1 QTRTD1 Homo sapiens queuine tRNA-ribosyltransferase domain containing 1 (QTRTD1), transcript variant 2, mRNA. 0.0 2302 80.06 0.6941431670282 TCONS_00000793_2 sp|Q9H974|QTRD1_HUMAN QTRD1_HUMAN Queuine tRNA-ribosyltransferase subunit QTRTD1; 0.0 794 91.81 0.997590361445783 1 coding 0 1 1 1 -0.0333073042690312 0.795495027063953 0.0393721848876975 0.539402506832519 CTGGAGGAGGACCTGTCTTGGGGCGCCAGCAACATTTTCCAGGTTCAGGCACGGACTAAGGCCAAAGCTGAAACAACCGCTCCTTTGCCTAGGCTGCTTCCGAGTCTCCGTGGGAGTTGTAGTTCCTCTGCCCACAAAGGAGCATCGGAGGCGGTGGTTCCGGGGGCAGAGAATTTTGCAAGCTGTACACGTGGTAGCTAAAGGCGAGAACCTAGGGAGTTTCAAGTTTCCCAAAGTTGGGAGGTTTGCAGGACTTAGAGGAATCCCTTTGAGATGAAGCTAAATCTTACCAAGGTGGTTAATGGCTGTCGTCTCGGAAAAATAAAAAACCTTGGCAAAACAGGGGACTGCACCATGGACATCCCAGGCTGCCTTCTGTACACCAAGGCTGGCTCTGCCCCCCACCTGACCCATCACACGCTGCATAAAATCCACGGGGTTCCTGCCATGGCTCAGCTTACACTATCTTCACTGGCAGAACATTATGAAGTCTTGGCAGAATATAAGGAAGGAGTTGGAAAGTTTATAGGCATGCCAGAATCACTCTTATACTGTTCCCTGCATGATCCAGTCAGCCCTTGCCCAGCTGGATATGTAACAAATAAGTCAGTGTCTGTGTGGGGTGTTGGAGGACGAGTAGAAATGACTGCCTCCAAGTTCATGGCCATTCAGCAGGCCCTTCAGCCAGACTGGTTCCAGTGCATTTCAGATGGAGAGGCAACTTGCAACGAAGCAACTTCCATAAAAAGAGCCAGAAAATCTGTTGACCGATCGCTTCTCTTCCTGGATAATTGTTTGAAGCTACAGGAAGAGTCAGAGGTCCTCCAGAAAAGTTCGATCATTGGAGTGATCGAAGGTGGAGATGTGACAGAGGAGAGGCTGAGGTCGGCTCGAGAAACAGCCAAGCGGCCTGTTGGCGGTTTCCTTCTGGATGGCTTTCAGGGGAATCCAGCGACCCTGGAGACTAGACTACACTTGCTGTCATCAGTCACTGCGGAGCTGCCCGAGGACAAACCAAGGCTCATCTGTGGTGTTAGCCGGCCAGATGAGGTGCTCGAGTGTATTGAAAGAGGAGTGGACTTATTTGAGAGTTTTTTCCCTTATCAAGTGACAGAGCGGGGATGCGCCCTGACTTTCAGCTTTGATTACCAGCCGAATCCTGAAGAGACATTATTACAACAAAATGGAACACAGGAAGAAATAAAATATGTGGATCAAACAAAGAAAAGTAAAACAACCAGTTGCAACCAAGAAATGACATCATTTGAAATTAATCTGAAGGAAAAAAAGTACCAGGAGGACTTCAGTCCTCTCGTGAGAGGGTGTTCCTGTTACTGCTGTAAGAACCACACTCGTGCATACATCCACCATCTGCTGGTGACCAACGAGCTGTTGGCTGGCGTCCTGCTTATGATGCACAACTTTGAACACTACTTTGGATTTTTCCACTCCATCCGGGAAGCACTGAAAAGTGACAGACTGGCTCAGTTGAAAGACCTCATCTGCCGACAAGCCTCCTGAGACGTGGCACCCAGTCTGACTCTTCACATCAAGCCTGCACCACGGTTGTGATGTGGGAAGAAGAGAGCCAGAAGTGATCGAAACTTTAAACTTTAGTCACTTATATTTGAGAATGAAGTCTGCTTAAAGTAGGAACATCTGTACTGAGCTCTGCCCACATAAGGCTAAAGAGACTTCTTAAAACTGAAATGACCTAGATTGATCAGAAGAAATTGAAACATGACCTTTCATATTTCTACACTCTTTTAGTCAATAGAGATTTGTTTAGTCAAAGATAAAAGCTTTAGATATAAGAGGACAGCCTTGAAGTGGGGATGATGAGAATCTGAGGGTTCACTGCGTTGGATTGGAACTTGAAGGGAGATGATTGGTCGTAAGTCGTATGACTTCTGTGGACATGTGCCTGCAGACCAAGAGGAATCTAGCTGATTCAAGAGTTTTCTTCATTTTTATCCTAATATTCTCAGGGGCCTCTTTTGGATTCTTCTGCCTCCCAAGCTGTCCTGGCAGTCCAGTCAACCAGAAATGACTCTTGTGACTTCACCAGGCTCACATCTCCATGGAATGTGGAGCTCTCACGTTGCTCCAATGACCAGTTGGCGCAGGGCACACTCTTCATTTGACCATATGGTCTTTCTGTGACTTTCCTCCCTAAAGTCACCACACTTGCCTGTGTGGAGCTGAAAGTTTGCATTGCAGCTTTCATCTGGTCATACAGATCCACTGTGGTCTGCCTTTCGGGCTCATTCATAGTCGAGCCACATAATGACTGAAGTTCCATCACTTGGGGAGATTCAGTCACTGTGTGTTCACTTGGACGGAGCCCTGGCCTGGCTGTTAGGGGATTGGGTTTCACTTACTCAGCTGTAACACTTGGGTATATATCACTTAACCTCCCCATTCCTGTTTCCTTCTGAATAATGGGGACAGGTGTAGTGAAGGGTACTAGATGAATCTCTAGATGAATCTAAGATTCCATCCAGCTCTTAATATTTGGGGAACAAGAAGTTTTAGATTAGAACTATAGCTTTACATGTATCCTTGTTTACTGATCACTATTGGCTTGATTTGAAATACAGTGGTATCAGGAGTCAGGCAACAGTGGAGATATTTGAGAGCCTAAAAAGAGGTTTGGCCCATGGATTTTGAAGTGGTTGGTAAATTGGCATCAGCAGGTCCTGAGGCTAGGAAGGCCTTCCCTGATCACGTCTCATTCTATGAATTTTTTTCTGCTCTTGTCAAAGGAATGACATTCATGTTGATGGTATGACAGGTGATTTTTATTTATAAGTGCTTTTCTATATTTGTCAAGTTTCCTGTAAAAATACACATACGTGTGTGTTTCACACATAGTTTTTATAAAACAACAGAACAAAAAAGATGCCTTTGTTTTGTTTGTAAAGGTATAAAATATTTGTTTTATATTTTTATGCTATATTTTCCTCTTTGTTCATTTTAGTGGGCATTACTGAACATTGTTTTTAATTATTATGTGGTTACTATATTTTTATATGTTGGGCGCCCATCTCTATGGTCTTCTTTTATTAGTGGTTTAAGAATGTACGTGAATTCCAAAGTTCATGAATTTCAGAATTCATAGATCCCCCTGTAACCTCTCTTCCAATGAATGGCAAGGGTACTTACAAAAGACAGAATTTCTATTCTCAAGAATCTTCTTGTTTTGAAATATATTGGATTGGACTTGTTCATATGTTTATATTCCTGTTCAATGTCAAGCCCATTGTTGGAGAAGTATTAATAAATATCCTAGAATCCATATAAAATTTATGAGCTTTATTTGTGTTCAAAGCACTGAAAATTCTGCCCAACTTTGTCCATTTCTCTGGATCTTTTTCTTATTAGCACATTTGAAAGAATATTTCTTTCCTTTAAACTGATTAAAGTCAATAACCAATAAACATTTTTAATTAAAAAAATATCTGGGTTCCTATAAATAGTAATGCATCTATTAAACAAAACATTAATTTCCATGGTACCAGAAATGTTCTTCATTGGAAAAGAATTTTTCTACATTGATTCCATGTGTAGTCATTGTTTTTAAGTGTACTCACACTAAATGCAGAATCCAGGAAAGAGATTCAGGGAGGCACCTGTCACTTTACATAATCAGAGGCCTTAAGGCTATGCTAGCATATAATAAAAATAA EMBV3_25412 GTTAGAGTAGGTGGGACGCTTGGGCCTTCTGCCAAACCTCAGCTTCACTTTATCCTGCTA Gene BVT0102_403739 + 0 NULL GK000014.2:45857813-45944735 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051846 1 XLOC_031305 Coding TCONS_00051846 XLOC_031305 Coding Coding ZBTB10 14:45824037-45874227 = TSS38579 21492 1 TCONS_00051846_3 909 0.172901544760841 8 0.571938074079978 0.000171854890028243 0.000187526421113808 0.000104091837880101 9.9191186348382e-05 0.000182801498534932 4.43193855782125e-05 0.000160993358259851 0.000100770248246312 0.000142436930660197 0.000363685050896511 0.00013857122797826 0.000202063015377492 8.35682445261803e-05 0.000260256901133612 0.000138256591995198 0.00478828548543505 0.00298066850707983 0.00650756914104914 0.000153845832641178 0.000162135521144632 0.000116755394543702 0.00191933499891826 0.00171588494042976 0.0024941224959176 0.000126511844437105 0.000113398375887328 0.000137358121891496 0.000594004322055407 0.000410674423289836 0.00107930708981331 XM_001253244.5 ZBTB10 PREDICTED: Bos taurus zinc finger and BTB domain containing 10 (ZBTB10), mRNA. 0.0 8774 99.98 0.226456355853341 NM_001105539.2 ZBTB10 Homo sapiens zinc finger and BTB domain containing 10 (ZBTB10), 0.0 8983 85.42 0.363158384515168 TCONS_00051846_3 sp|Q96DT7|ZBT10_HUMAN ZBT10_HUMAN Zinc finger and BTB domain-containing protein 10; 0.0 1469 93.07 0.930693069306931 2 coding 0 0 0 0 1.64435035906374 0.00125532583234652 0.0298243166498859 0.693241469848661 CTAAAGAGGCAAAGGGCTGTGGAGGCAAAAATGCCTCTCGAAGGCAATAAACAATACTCAAGTTTGGTCATCAGAGATCAGCTGAACCAGGTAGAGGAGTTTAGCCTCATCAAGGAGTTACAGGGGAAGAGTTATCAAGAGGTGCTGCATCGAATACACAATGTAGCAGACGAGGAGGTGCCCGCGGTTGTAACCTCCTCGCGCGAAAGNNNCGGCGGCGGCGGCTCCGCGAACAATAACGTTGGCGGGGAGGCCTCGGCTTGGCCCCAGCAGCCCCAGCCAAGACAGCCCCCGCCGCCAGCGCCGCAGCCGCTCAATGGGCGGGGGGCCGACGAGGAAGTGGAATTGGAGGGCCTGGAGCCCCAAGACCTGGAGGCCTCCGCCGGGGCTGCCGCTGCCGCCGAGGAAACCAATGAGTTGCTGCTCCCCCAAGACGCGGGCGGCCCCACCTCGCTGGGCGGCGGTGGCGCCGGGGGCCCCCTGCTAGCGGAAAGGAACCGTCGGACTCTGGCCTTTCGAGGCGGCGGCGGCGGCGGGGGGCTCGGCAACAATGGCAGTAGCCGCGGCCGCCCCGAGACCTCGGCGTGGCCCCTGAGGCATTTCAATGGGCGAGGGCCGGCGGCCCTGGAGCTGGAGCTGGACGCGCTGGAGGGGAAGGAGTTGATGCCGGACGGCGCGTCCCTGAGCGAGAGCACCGAGGACGAAGAGGAGGGGGCGAGCCTGGGCGACGGCAGCGGGGCGGAAGGAGGCAGCTGCAGCAGCAGCAGGCGGTCGGGCGGCGATGGCGGGGACGAAGCGGAGGGCAGCGGTGTGGGAGCTGGAGAAGGAGAGACTGTCCAGCACTTCCCGCTCGCGCGGCCCAAGTCCCTAATGCAGAAGCTCCACTGCTCCTTCCAGACCTCCTGGCTCAAAGATTTTCCCTGGCTGCGCTATTCCAAGGATACTGGCCTTATGTCTTGCGGCTGGTGCCAAAAGCCCCCCGAGGACGGAGGAAGCGGGGATCTGCCCCCAGTGGGGCACGACGAGCTTTCGCGAGGGACCCGCAACTACAAGAAAACCCTCCTTCTGAGGCACCACGTCTCTACCGAGCACAAACTCCACGAAGCCAACGCCCAGGAGTCAGAAATACCATCAGAGGAGGGGTACTGTGACTTTAATAGTAGGCCAAATGAGAACTCTTATTGCTATCAACTTCTTCGACAACTAAATGAACAGAGGAAGAAAGGTATTCTTTGTGATGTCAGCATTGTGGTGAGCGGAAAAATCTTTAAAGCTCATAAGAACATCCTGGTTGCAGGCAGCCGTTTCTTTAAGACTTTATATTGCTTTTCAAACAAAGAAAGCCCTAACCAAAACAATACTACCCATTTAGATATTGCTGCAGTTCAAGGTTTTTCAGTCATCTTGGACTTCTTGTATTCTGGTAACCTGGTGCTCACAAGCCAAAATGCCATTGAAGTAATGACAGTGGCCAGCTATCTTCAAATGAGTGAAGTTGTTCAAACTTGCCGAAATTTCATTAAAGATGCCTTAAATATAAGCATTAAATCAGAAGCTCCAGAGTCTGTAGTTGTGGACTATAATAATAGAAAACCAGTTAACAGAGATGGCCTGTCTTCATCACGGGATCAAAAAATTGCCAGTTTTTGGGCAACACGAAATCTTACCAATTTGGCAAGTAACGTAAAAATTGAAAATGATGGTTGTAATGTCGACGAGGGCCAAATAGAAAACTACCAAATGAATGACAGTAGTTGGGTCCAGGATGGTTCACCTGAATTGACAGAAAATGAGTCTCAAGGTCAAACAAAAGTGTTTATTTGGAATAATATGGGCTCCCAAGGGATTCAAGAGACTAGCAAAACAAGGAGAAAAACCCAAGCTACAAAGAGATTTGTTTATAATATACCACCTAATAATGAAACAAATCTAGAAGATTGCTCGGTGATGCAGCCACCTGTTGCCTATCCAGAGGAAGATTTGTCATTCATCAAGGAAGAACCAGATCTGGATGGTGCTCTACTCTCAGGGCCAGATTGTGATAGGAATGTCAGTGCAAATTTATTGACTGAAGCCAGCTCTGGTCAAGAAGGAGGTGATGCTGGTCCTTCACATGATTTCAAGTATGGCCTGATGCCTGGCCCTTCTAGCGATTTCAAGTATGGATTGATACCAGGTACTTCAAACGATTACAAGTATGGATTGATACCAGGTGCTTCTAACGATTTCAAGTATGGATTATTGCCTGAATCTTGGCCAAAACAAGAAACTTGGGAAAATGGTGAATCATCTCTAATCATGAACAAGTTAAAATGCCCTCATTGTAGCTATGTAGCCAAATACAGACGAACACTAAAAAGGCATTTGCTCATTCATACGGGAGTCAGATCATTTAGCTGTGATATTTGTGGAAAACTGTTTACTCGAAGAGAACATGTAAAAAGACATTCCCTGGTGCATAAAAAGGATAAAAAGTACAAATGTATGGTGTGTAAGAAGATCTTCATGTTAGCGGCCAGTGTTGGAATAAGACATGGATCTCGGCGCTATGGTGTCTGTGTAGACTGTGCAGATAAATCACAACCAGGAGGACAAGAAGGTGTAGATCAGGGACAGGATACAGATTTTCCTCGGGATGAAGAATATGAGGGGAATGGTGGAGGAGAAGCTGATGAAGAGCTGGTTGATGATGGAGAAGATCAGAATGATGCATCTCGATGGGATGAATCAGGAGATGTTTGTATGTCTCTTGATGACTAACTGACCTTCTATACTCCTCAAGGATGCTGCATTTGGACATAATATGAATCAACAATTTGGATTGTTGAACTTGAAGGCTTGCAAAATATGGTACATGCTGGATGGTAGTTACATTGCTGTGAAAACTGTAGGGTCAAAGCCTTATAGCAAAAAAAAAATTTTTTTTATATTTGCACAGGACTGTACAGCAAACAACCTTGTGGTTGAATTACATGGAGTTCACACATCTTCAGTCAGTTATCAAAGTAAAAATATTTTTTATTTATAGGATATACAGTAAGTATTTGGATCCTCTGAAAATATAATACCTGTTCTTAAAAAGCTTACATTCATGTGCCACTTTAACATGAATGAAGAAAATTCGTTTATTAAGAGTACAGTGACAGCTGACCTAATTACTCTGTCCATCAAACCACTCAGGCTAGTTTGTACTAGTAGAGTTTTGTTTCTATTTTTATTTTTATTAATTTTATTTTTTTTAATACAGATTTTCAGTGAGGGGCCTTTTCAACCCCATTGGTTCTACTTTTCTGTATTTTTCACTTTATTTTGCTTCATAACTTAAACCAAGTCTCTTCTAGTCTTAGGTATTATTTCTCAATTTTGTGCTGATGGGCATGTTTATAAGAACTGGAGAGGTAATTTATTGGAATGAACTAACTGACTTCCTCCATTCCCCCTTTCCTTTCTGACATGAATTTTACTACTTTATAAATGAAGAATGATGTTGCAAAGTACCGTGGTGAGGTTGACAAATACCACTAAAATGATTATGATTTAAAAGTAACTTTCTCCTGCTGCTCTAATCTGATAAATGGTTACTATATGACATTTTCTGACAAGGCATTTGGTTTTGGGTATCTGTTACTTTGGCACTACTCTTGTTTGCTTCTTTTTTATTTTTGCCAGTGTACTATACCTCAGTCCTATTTGAAAAGACAGAAGTCTAATTGAAAGAAAAGTCATAGAAATAATAAGTAAAATGATTTGCTTTATAATTTATCCTCCATGTCCAGTTTGGTTAGCTTGTTATGCAATATAAGTGAAATATCAGGTTTTTACTCCTGTGCCCTTTTATCATTAAAATTAACACAAAAAGCGCATTCTCTTTTGTTTCATACTTACGGGGTGTTCAGGGTTTGAAATTATGATAGATAATTAATTTATTTTTCAATTCCTTGAAATCACTACATCTTGATATATATATATATAGTCTTTTTAGTAGTCACCATGATTCAACAATCTGCAAAAGTCTTACAAATAAAATATTGCGAGGCTTTACAATTTTTTATTCTGTTCACTAAATTCTTCAGGATACAAGGGATGATGTATTAAGTTGAAATCGCCAGATTTATTTAGTCTGACAGATGAATTAACTGATTGACTCACAGCAGCATTTCACATAATTGATATTAATATGCACAATGTTTATCAGGAACATACTGTATATTATATAAGATTGAGGGATATCATATTTTCAGCTTTCTTTTAAATAGAAATTGAGTATATTTTCTTATTTTATATCAGGTAACTAAATTATGCTAGTCATGTGGAAAAAATTGCAAAGTACACTTTGACAGACATAATCCTTTTGGTGCTCCATCTGATCAAAGTTGAAAAGACTGGGTTTTTTAAGAGACAGGCTTTCTTACTGTCTCTGATTTCAGTAGAAAGATGGTTTAACATTAGACATTGATGCTTCTGCTTGGATAAATCAAAGAGTACAGTTACATGGTGAGATGCATCATTTGTCACCTAAACTTTATCATACTTTCTATAAAACTGAAAAACTGACATGAACAGTTTTGGTTTGGTTTTTGTTTAAGACTGAAGAGTACATCTTTTTCTCAGTGTTCTAGACAAATGAGTAAAATGTAATTCTGGTGGGGTCCAAAGTAGACGTTAGTTGGGCAAAGATACTATGAATGGAAAAGTATTTTAAACGTAAAATGTTCTGCTTTGTGAATATGTAAGTATAGTATAAAGATTTCTTTCATCCCATTTATCCCTCTCCTTTAAAATAAACCATAGTTTACAATTGGTAGATCTGTCTATATATAAATATATATTAAAGAGAAAAGATATATATCTGAAAATCACCTAAATCTGCTTTATTAGACTACAGTTCACTTATTGCATAGAAACTGGACTTGGCTTTACATTCTTAATGTACTTTTACTTTTCCTTAAGATATGAACTTACTCTCTTTAAACTGAATTTTCTTTACTACTTAAATTGTTTATGTATATCTGGTAAATTATGACCAAATTTTTGTTAGATTGCATACAGTAAATTGAAAATACACACTTGGTACACTACGGATTGTTGTGCTTTTGTTTTGGTTTTAGTTGGAAACAAGGTTTGATGTAGATGGCTTGTTACTGTTAATTTAAAATATTCTATAATTATTGTCCATTACCTTCTGTGTTGTGTTGTGACAGATTTGGCTATATTTTTAGTCAACTGAAATAATGATACTTTAAGAATTTGTTTTTAGAAAGGTAATCCAAAGGAAAAATGTTTATACTCTTGAATATATTAGCCTCAGCCTATATAAAAATTTCTTCTTTTAAAGTAAACATTTTACCAGAAACAGAATTGACAGATTTTTCTACTTGCTGACTGCCTAACTTATTTTGTTTCGTGATCTTGAAGGGACTGCTTTTTCCCTTCTAGGTCTTTTTTTAAAAAAATAGTTTAGTACTAAGGTATACTACTGGATGTTTCTATTTTTTTAAGTATATTCTTTTTCTGACTTACAGTACAGTTTCAGGAAGTTGATAGATACTAAGAACTCATGATTGGTCTCAGAGAGGTAACAGTGGAATACTCGTAATTTTGTCTGTGGCGCCCTGGCGGAATTATGTGTTACACATTTGCTGAATTTTTCTCTTGTAACTTATATTTTAAATGAAAAATATTTTAGATCTTTTATTTAATGAAGGGGGAGAGTATAAACTGTTTATTTCCTATTCATTTTGTAGTAACAGACCCTCTCATATAAATCAAGATATCATGTATTATTTCTTAGGAGTCTCAGAGGCAGTTACTTCCATACAGCCCCTGCTTTTTCATTGTTATTGGCCCTTATTTTTCACATTCACTAGATACTTTGCTAAATTTCAGCATCCTAGCAATTAAGAGCTAAAAAAGAAAAGAAACATTATAAGGGAAAATGGAACAATAATGAATAGCTTTGAAATCTGGGGGGAAAGCATGAGCTGGTTTTTTGGTAGAGCCATCCTGCTGAGGAAGAGTGAGATGAAGTTTATTCATGTATGTAAAGCACTTAGAACACTGCCTCGTGCATAATAGTGACATGACACATCTTAGTTGTTTAATAATATAGGAGAACCAAGGGGGAAAGGAGTGGAAGAATAGAGAACGGGGAATGAAAAAATTGGGACTTAGAAATTTGTATTAAAACATTGTGTTATAAAAGGCCTGATAATGACTAGTATAATATCGGGGATAGTGTGATGGAAGAAGGGTCTTAAAAACCATAAAATTTAAAACCAATAAGCTCTATTACATTTTTAGGATATTGTCAGCATAGGATGAAAAAGTTGTTTTTCTGAATAATTCCAAAAGCTAGCTTGTTTTTAGTGCCTGCACATGCCATTGCGCTTTACCTTATCAAATCCCCTATAAGTAGGTGCTATTGTCTCCATTTTATAGACAAGGAAAGGCTCCATGAAATTGCCTAATGGACTAATGTAACAGTCACTACAAAGTAGAGCTGGGTTTTGACCAGGTCTGATTCTGAAGCCCATGCTCTGTTTAGGGGGCTCTGTTGCTCCAACTTTTGTAGGATTTTAGCTCTTTAAAGTGGTCTGTCTATGGAGACATATTTTCCATATAAAACAGCTATGTTAGGAATTTGAGTGTCTGTCTAATCCTTCCTCCCCCAAATGTCCTTAACTACTCTTGCCTCCTAATACAGCAATTGTTACACCACATGATTATAAACAAGATACCCTTCAGTGTAGCACATGCTATTAATTGGCTGTAGCATTTTCATTTTAAAAGGATGATTTTTAACTGAAGAATTAGATATGAACCCGTTTTTGTGCCGTTCAGTCACCCAGATCCTTAAACTTAACTATGGTACATAATATACATGCTTAGAACTAACATATTTTTTCTTAGTCACTTTAGGATTTTAAATGGAAAGGTTTTTTTTCCCTGCTGTATCCCTACTTTCAAGTGAAGTTGAGCCATTCAAGATATTTAGTTTAAAATGTTTTAGGGATAAGCACATTTTAAAAGATGTTTTGTAGCCCTGAATTTTATGACATTGGGTACTTAAAATTTAGAGTATGCTGCTTATTGAGAACAAAATTGGATTAAGGAGAGGGTTGGTTGAGGCCATTATGAGATGGGAGAATCAGCATTTTAAAAACACTGTAAACAAAAGAACACTTTCTGCCTGCTGTTTGTAAAAGCTCTTTGGGAAGATCTTTTACGAAGACCAATTTTTAATGTAATTTACCTACCTAGTATAAGTGTCCTAAGACATGTATGTAAACTTCCACAATGTTTTTTTTTTTTTTTTTTTTTTGGTCTGTGTATTTAGAAAATACACACGAATCTTTATCAAACCTAAAAATATAAACTTGTGAGCACTGAACTGCTTCTGGCTTTGTGAATTTTGTTGACTCTGATATTTAATCCAGATTGCTTTTAACAACAATAATTTAGACTAACTGGGTATGGGAACTCCTTTGTAAACTTTGACTTATGTATAATTCAGATACCTTTGTATTGTAGAATATTAAGGTTTATCTCTTTTTATGTGAAGTGCATAAAAGGCTCAAACTACCTCCTAGTAGTAATTCTTGGAGAGCTGCTTTAATTAGTAGAAAGCAGTCATTTATAATCAGCATATCTTTTGTCTTTCATCTGTATTACTTTTGGAATTCTCTACAGGTTGTAGATGACATTGAAATAGTTTCCCTGAAAGTACATATTTCTGGAAATGGGTTGAAAAGCAAAGGTAAACGACTTCACCTATATTTATTGCATATATAGCAGATTAATGGGTTAACAACTTTCAAGTCTTTGAAACTTTAATAATACAGAAAAGAACATTTTTTTGTGGTGATGGTGTTAAAGTAATAGAACAAAGGACTGGATACCCAGACTTTTAGTTATTAAATGAGAGTTTTGATTTAGTTTGGAAAATGAAGAGGGGATGCCCATATTGCATACAATTCCTAGTGTCTTTAAAGTACTAAAAGAACTCTCATGTGGCAGTAGATATATTTTAATGGTTTGTGTAGATAACATTCTCTGTGGTTCCAAGGGGTTAAGATTGGACAAAAGATGAAGTAGGGATTATTTGAGGGGAAAAAACAACCCCTTCACCCAAAATTTCAATTTCAAAATGAATTTTTTTGGTTGTGATTTTTCTGAACCATTGTAATTATCAACTTTTTGTTTTGCTTAGAACATTGTTAAAAATTATGTATAAATATCTCATGAAGCACATTTTGACACCAAAATGGACACAGCTAAAACTTAGAAAATCATGTTTAGCTTTATGGAAAAAATTGTTACTTGAACTTTTTTCTTTTTCACGAAAAATCCAGACCAATGTTTGGAAGATGGTGTAGGAAATTCAATGATTGGATCTGTAATTAGATAAGAAAATTAAAGCTCTTTTGAATTTTAATAACTGAACTAAAGGAAATTTAAAAATGGAATACAGGAAAGTTAAAAAATAGGTTCTATAGTTGCATGGTGCCTTACATGCTATTAATACTACCTTTTGAATCCCCCCACCCCCACCCCCGCACCAACAGTCCGTTTGGCAATAAAGTACTACTCTTCCAAGAATAATTAGGTATGTTTTAGTCTCTTAGTGAAAGATACCCAAAAGACAGTCCTCTTGAAACATATCCCCAACAGTTGTTGAGAGGACAGTATATAAAATGGTCTCATTAGTTATTAAAAAAATTCTTAGAAGACACTTTATAAAGATTTAAGAGTTAACCAATACAGATTCGATTGCCAGGGAGGTCACTACAATGACTTTATAGTCAGTTTTAGATCAGGGCTCTTCAACTTTCAGTGTCTTACCTGTAACAAATTCATTCAATAAATATTTAACATTTGGGAAAACTTTTGAAATTAAAGACTGCAAATTATATTCAAATAACAGTCCTGGCACATAGAGCTCAAAATTATTTCCTAAGTGAAAGATTAAAGACATAAACATTTTTAAGGCTTTTGCCTGCTAGTATCTCATGGCATACAGCTTTCAAGTCAGTTTTCTTTAGTTTGTGTTGTGCCATGCGTAGGATACATGAGGTCACACTGGGCCCTAGGGACCCTTCAGTACCACCATAGGTGTCTATACCCAAAGACATAATCAAACCCGACCTTTGGCAAATACTACCATAGAGATCTCGATACAAATAGTGATTTTTTTTTTTTTTTAAGCTACACCATCTCCATAACTTAAGCGACAAGATTAGATACTTGCTGCAAAATTTTAATAACTGGCATAGCTGCCGCTGAATATCTTAATAGTGTATATAAGGAAGATGTGAAGAAACTAGAAAGAAAACCCTATTGGAGTTTAGTCCTTCATGTAGTGTAGGCTGCAACAGTGGTATAGATGAAGATGTGTGGACCTGATGTTTTATTTACTGATAGAATTTTTTGTATTTGTGAAGAGGCATGTTGGGTGTTAGCATTTGTATTTTATAGTGGGAAAGAAAAATGTGTTTATCTGTCCCTTGTTCTTAGTCATCTACTTGAATTTTGTTAGCTCCTGGATTCCTAAACAGAGATGGTAGTATTTACATAGAGACATAAGTGATTCCCCAAAGCAGGTTTTACCATACTAAATTGTCAAGTAATTGCCACTTAAGTCATTAATTAGCTCATTCCAAAGAATGGCAATTATGGGAATTGGATCAGCCTCCAAGAGTTCTAACCCAAGGGCTTAGACGTCTATGGCAAAGAAAGTGTGAAGAACTTAAGAATTACTTTGTGTGTGTTAGTTGCTCAGTCATGTCTGACTGTGACCCTATGGACTGTAGCCTGCCATGCTCCTCCATCCTTGGGATTTTCCAGGCAAGAATACTGGAGTGGATTGCCATTTCCTTTTCCTGGGGATCTTCCCAACCCAGGGACTGAACCCAGGTCTCCTGCATTGCAGGCAGACTCTTTACTGTCTGAGCCATCAGGGAAGCCTAAGAATTACTTTAGCTCTAGGTAAACAACTAGAATTTTATATATGTAGGTATAATTTTTCTTCAGTTGATAGTCTTAAGTTTGCTTCCTTATAAGATTTTATTATTTCATAGGTTTTGGGGCATTTACCTTGGAGTCCTACCTTAGACTTAAGGCAGTTTTTTTGAGCCATTAATCATCCTAAACTTTTGCTGTGTTCCTGCCTTCTGAAGGTTGCTGACTTTGGGGCACCCTAGTCTGTTTGCTGGCCTTCTTTGTTACTACTAGTGACCTATACCACTCTCAAAATGTAAATTCCCATTTCAGCCAATGGACTCTATTCTTCTTTGGTTATACATGTGTTTAGCAGATATATTGAATACCAGTTTGTGAGAAAATGATTACCCATGATGGATAATGGGGTCACACTGCGTTCACTATTTTACTCTCAACTATTTGGGATGAGAAAAGATGCAAAGTTAGACAATCAGGGAACTTTATCAAAGAGGCCTTTAATTTCAGTGATTTTTAAAAGTGATTTAGTAGAAGGGTTGAATGGCTGAAAATATAAAATGGTGCAGATTGTTAGTAATGCATACACAACACTTTGCCTTCTTCCTCTTCAGTGTAATAAAAAGGAGATACTTTCACCTTGAAAATTTACTACTTTCTATATGCCTCCCAGTTCTCTGTCAGCTATACCGGACAAGTCTGTAGTATTAGACAGGCTCTTCTTTTTTTCAGAAGACCCGACTGTACTCAGGGAAACGGACACCTTAGTGTAGAGTCTCTGTACTGTTAGGGGGAACTAGATGATGAAATGACTCTACCTAGAGCTTTCTTATCCAATAAAAGTTGTTCACTCAATTGCAGGAACTTGGGGCTGATGTTCATTCCACATTTTTTGAATAGGGAAAGAATATCACCTTTGCTCAAAGGGTGAAATCACAAGCTTCTATATTCCTCCACGTCCCCATCCCAAGTTATTCTTAAATAGCTTAAGATTTCTACTTAATTTTGATGTACTTTTTTAAACAGGGCATATTTAAATGAAGTCGCTCAGTCGTGTCTGACTCTCTGCAACCCTGTGGACTGTAGCCTACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCTTCTCCAGTGGATCTTCCCAACCCAGGGATTGAATCTGGGTCTCCTGCATTGTAGGCAGATGCTTTACCGTCTGAGCCACCAGGGAAGTCTGGCATTATTTATGCATCACTAAAATTAGTCTCACCTCATTCAAAATTCGAATCATCTAATATTCCATGTCTATGTGTGTTGTATATTTTACAGTTTGCTTTTCAGTCAGGATTCTGATAATCTTTAATAGGAGTCAGCATATCTTTTCTGTATAGGGCCAAACAGTAAATCCATCAGTATATATACTGAGGAAGGATGTGCCTTCTTAACATCAATGAATTTCCTTTCTAGGATTACAAACGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGCAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAAGAGTTGGACATGAGTGAGCGACTTCCCTTTCACTTTTCACTCTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAGTCCCAGGGATGGGGGAGCCTGGTGGGCTTCCGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCAACTTAGCAGGATTACAAATCTGGGGTAACAGGATATAACACTTCGATGGCACCATTTTATTGTACAGGTTTTTTTGATGTAAACCTTTAAAAAATTTTTGTTTACTGTGTTTTATTTTCTATTCTTTTGTTTTTGGCTGTATTGGGTCTTTGTTGCTTTGCACAGGCTTTCTGTGGTTGCAGCAAGCAGGGGCTACTCTTCATTGCAGTGCATGGCTTCTTGTGGTGGCTTCTCGTTACAGAGCACAGAGTCTAGGCATGCTAGCTTCATTAGTTGGGCACACAGGCTCAGTAGTTGTGGCTCATGGCCCTAGAGAACAGAAGCTTGGTAGTTGGAATCTTCCCAGACCCGGGATCTAATCTGCATTCCCTGCATTGGCAGATGATTCTTACCCACTAGGCCACCAGGGAAGTCACAATGTGGACCATTTTTAAAGTCTTAATTAAATTTGTTAAAATATTGCTTATGTTTTCACATTTTGGTTTTCTTTGGCCACTAGGCATGTGGGATCTCAACTCCTCAACTAAGCACTGAACCCACCCTCCTTACATTATAAGACTGAGTCTTAACCACTGGACTGCCAGTAAAGTCCTCCTATGGCACAGTTTTAGATACCACCTTGGCTGTGATGAAACAAAAAGATTTTAACAGGAAATCAGATAAATACATCCCAGTATACAGAGTGTCCCCTCCCATTCCCTAGTTGCTAAATGAGAGAAAAGTGAAAGTCGCTCAGTTGTGTCCAACTATTTGTGACCCAATGGACAGTACAGTCAAGTCCATGGAATTCTCCAGGCCAGAATACTGGAGTAGGTAGCCATTCCCTTCGCCAGGGGATCTTCCCAACCCAGGGATTGAACCCCGGTCTCCCACATTGCAGGTGGATTCATTACCAGCTGAGCCACCAGGGAAGCCCAAATAAGAGAGAATATGTCAAATTCAGAAATATATTCAGAGCTTTAAGAAGAGATTTTAACTTGCTGATAAAAGTATGTATACTTCTAAATTAGACTTTTATTGCCACTTAATCCTATCTTTACCCTATGTTATAAGATTCTTTTATATATATATATATATATATATATATGTATATATATATATATATATATAGCACTGAGTGCAATGGCACCCCGCTCCAGTACTCTTGCTTGGAAAATCCCATGGACGGAGGAGCCTGTTAGGCTACAATCCATGGAGTTGCTAAGAGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCAGAAACGACTGAAGTGACTTAGCATAGCAGCATGGCATTGAGTTTCTATAGCCTTTAGAATGTAAGCTAGGAGTCAACACTTAAAAAAGGTGTACTTAAGTCAGACTTGTGAGTCATCCTGGACACAGTTTGAAAATACTAAGCTTGTGAGTAACTGAGCCAAGATATGTGACCTGAAAAACATTCTATCAAGCTAAAGAAAACTTCCCAAACTAAAGACTCATACTGAACCAGAAGCCTGTGTCATTGTTTCAGACACATGTAATTGCCCATTAGGAGCCCCACTGAGGACACTTCTCTTTGTGTTGCTCGGCCTCTTGTAGTAGACTCAGGTACATGGCAAATGAACAAATAACAGCACAATTATTAGTCACAATGTCTCTTCACACACATTTTCAGCATTGGTCTAAAATAGTTCCAAGAATCTTTCCTCAAGGTTAAAATTAATCACAACAGATGGTCCGATTTTAAGAGATTTGGAAAAAGTTTTGTTGCTCTGTTAACGTGGTACTGTCCCATCAAGTGTGTCAGCTATATCTAGAAAGGACACAGTGATGGAAGGAACTCTGAGAAGAACACTTGACATAAGCAGGGGTTCTTATCTGGGCATCCCATTCACTCCTCAACCCACTGCACCTTAGAATGCTAATTCAGTATTTAAAACTACTTTCTTAAAAGGCCACTAATGAAGTTGCCAGAGCCCCACCTCTGCATCATTTCACACTGTTAGTGACTAATTTCCTTCACACACCTGTCCTCTTACTTGACCCTGTATGCATCAATATTCTTTTCTTTGCAGGGCACTCTATCAGTGTTCTTTCCCATGGAGGGTGGTGTGTGCGCTCAATTGCTCAAGCGTGTTCAACTCTGCAAAAGCCTCATGGACTGGAGCTTGCCATGCTTCTCTGCCCATGGTGGTGATAATTACAAATGATCACAGTGACCTAAATCTTGGTTGACCTCTGTCCAGAGTTTACAAGTATTTGTTGAAATGACACTGTGCATTGTTTGATCCACAAAAGATTTTCAATCACATTCTAATTTGGATCACTGTTCTTCAGTTTCTCGTGGATGACCGCAAGGGTCTTTAGATTTACATTTTGGTGTATGGAGTCTCATCATGATCATAGCAAAGTTACTTTTAGAAAAATTACAGCCTTGATTTTTTTGAAGCTATTCAATGTATGCTAGCCATGTAAACAAAATTTGATGTGATGTCTAGCTGACTTGATCATGTCATATCAATATGTATGTATCTCTGTTAACTATGCAGACTAATAAAACCTTCAAACTGAAGGGACCTGAGAAAAACATACACATTTGTTATTCAGTCTCTGCTTGAACTGATGCCATCAATGTTCATCTCCAGCTCATAGAACATCTGTGTTAGGTTGAGATCCTTCTGTTCTCTAAACTGAGTTGAGTTGAAATTTGCTTATTCCCTCTCCCAATGCCACATGAAATCCACATAATGCCTCATGTAACTGTGGAAACTGAAAAGTAAGGTACATTATATTTTAGGACTACTTAGGGCCTTAAATTTTTCCTCCTAGAAAACAGTATGTTTTCTGTAAGTATAAAGTCAAAAATCCATACTGTTCATTCTTTTCCAGTTTAATGTTTCATTCTTCATTTTTAGAGCTAAGAATCAAATATTTAGTATGAAAAACTGATGTCCAAAAAAAGACTTTAAAGTACCCAGAAATATTTCTTGTAAAGTAGAATATTAATTTGCTGGCACTGGTATATAACACTTAAGATTAAACTTGCTTCTCCAAGATAAGATTAAGTTTGCAGCTTGGTATAAAAATTTAAATGTTACTTAATCCTAGCTTTCAAGAATTCATAATTAATTGATTTCTTAATGCAGTACAATTTTATTGTATAAATTTAATGATTGAACTCCCTTTAGAAAATGTATTACAAGGGAGATAAGAGTTATTTTTTCCTTTAATTGCATTTCAGATCATATTCTAAAAGCAGTGAGAAATATTTTTATTAAATTCTTATAAAACTTCATGCCCAAGCCATCCGTCTCCCTAGCAGCAGGATAGATTTACAACTATGGCTAATTTGTCATTTTTATACTTAGTGTGAAAAAGATGACAAGTACAGTCCTGGTGCGCTTTTGTCACCAAGATGAAGACTGGGAATATTGTCTTTATCAGGGAGCCAGTTTAAGTCCCAAAATTATTGAATGCTCATTGGCATAATATTTCTTCTCAGTGTTTGAACTCTAAAAATACATGAGTGGGAATATCCATAAAAAGTTATCCAGAATGCATTTTGTAAAGTTTACTGCATGCTGTTTGAAAGTTAACCCTGTATCTTTGTTTCAGCACAAAATACAGGAATATGAGCTGAGGATCTGAGGATGTTTTGCCTGTGTAGGTGATGAATTTCATTGCAGTTTTTCATCATTTATGGATATGAGAAAGAAAAGGGCATGTTTTCACCTTTTAAGTATTTCTCACTGACATCGTGACAGTTTGTTATAAACTTATGTTTAATGTGAGCAGTTTCTTTATAGTATCATTGTAGACCTCAGAATGGCAGGGGTTTTTCAGTTTTTTTGGAAACTAAGCTTAAATGATGCAGATGTAATTTGCAGGCAAAAATGAATAAATTTGCATTGTATAGTTTGCCACTGTAAAAGTCCATTTTCTGCATATAATGAAAGTGAAGAGACTTGAAAAATCAGATTTGAGAAAGTTTCCAACATATATTGCCACTAATGTCCTGCTTTTTAAGTAGAATCTTTTTTAAATATTTTTATTCATTCATTCATTCATTCATTTTTGGCTGTGCTGGGTCTTCACTGCTGCACATGTGCTTTCTCTAGCTTTGGCAAAGAGGAGCTACTCTTGGTTGCACTGTGGTGGCTTCTCGTGGGAGCACAGATTCCGGGGAGTCAGGGCTTCAGTAGTTGTAGCTCCCAGGCTCTAGAGCCACAGGCTCAGTAGTTGTGGCACACTGGTTTAGTTGCACTGTGGCATGTGGTGTCTTCCTGGATCTGGGATTGAACCCATGTCTTCTGCATTGGCAGAAGATTCTTTACCACTGAGCCATCAGGATAAGTCATCAACCATCTTATATTTCCACCTTTATTAATATATTAGTATAATTAATTGTTGGAGATGAATAATGAGGCAACTGCAAAGGCAAAATCTGGTATTTTGTATTTTCTTAGAAGGACTGTCGGGCTTCCCTAGTGGCTCAGATGGTAAAGAATCTGCCTGCAATGGGGGAGACCTGGGTTTGATCCCTGGGCTGGGAAGATCGCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCCATGGACAGAGGAGCCTGACAGGGTATAGTCCGTGGGGGTCACAAAGAGTCGGACATGACTGAGCGACTTAACACACACCACGCAGAAAGCAAAATTTATGCTGTTAAAGAAAATTGTAAGCACTTGAAATTGTACTATGTAATTGAGTCCCGTCATAATTTAAGTACAAAGTATTTTCATTGTAGGATTAATAGTTAGAATATGGTATATATTTAAGACCTTTTATAGTTTAGTTTCAGAGTTGAAATCTTTCTAAAGCTTCTGAAAAGTAAAGGTATAACTCATTTATGTGGCTGTCTTATGGACATTATAGAAGGGACTTTTATATAAGTCATACGAAGCAAAATGTATTGAAAAGAGTATTCCTTAACAAAAGTTTTCATGATCTGTAGACATGATGTAAAAAGGTTTCAGAATAAACTATAGGATTTCATAGGAACTTTACTTGTTTGAGCAGGTAAATTTGGAAACTAGAGTGTTTTCCTTTAATGAATCCAGTCTATTTGGTGTATTAGATAATTATTATCATTCAGTTCATGTCTGTTTCTTTAGTTCTATTAGAGACCCTTTGTTCTTTCTTTGGTAAACAGTGATCTAAATTATCATATATGCTGCTGTATTCTACAGTGATTAATTAGCATAAGCTATTCAAACACACCAAGGCATTTCTATTTTAAAATCCATCCTTGAAGAGAAAATAACACTATAAGATAATTGCTAGTAACAGTATTCATTTTCTATATATCTATTTAACTTATTTACAATGTGAATTTTAAAAGTGAGTATTTTGTTTGCACATTTCTTTTTCCTGTTTGCATTTTACTCTACAGTCTCCACTCACTTTTTCCAGTTCCTGCTTTAAGCCCTTGCTTACCTTCATGTGATCTTCGTCTGACTCTTAGGAGTTATTTTTCTCTAGCTAAATTCTTTTAAAATCTAGCCATGTTTTAGATATAAATACAAAACAAAGTGAATTTGAATCCTTTTTTTTTTTTTGCCAAAATAATCCCAATTTTAAAAAATTTTTATTCTAATGGAAACCATGTAAATTTGCTGCTTGATTCTGAGTACTTCACCTCCAGGAACTGTTTCTTAGTGAATTTTTCTCTGCCTTAAATTTGGCTATTTTGCCCTGACTATGACCTTTCTTATTTCAGTCTAACTGGCTAACAAATGCAAAACAAATCTCAAAAGAGGACCATTGTTTTCACTTCTAAATAACCTTCTTCAGGGATTTTCAAGCTATGCTCTGGGATCCTAAGAGTCTTTGAAGATGCCTTCCTGGGAGTGGGGTTAGAGTAGGTGGGACGCTTGGGCCTTCTGCCAAACCTCAGCTTCACTTTATCCTGCTATGTTTTCAGGGCCCAGTAATTACAAAAAAAAAAACTTTTTTAAACCAGCAACTTAATTTAAAGACATTCATGAATAATTCATACTATTAGTAATTAATGATAGTAACAGTAGCTTTTGTTTATAGAGGTTTGTCATGTGCCAGACTCTCCAAGTATTTTCTAACGTTAATCTATTAATCCTTAAAACAACCCTATAAGATTAAGCATTTTTGCTATTCCTATTTTACAAAAGAGGAAACTGAGATTTAAGGGTATCAAATAACTTTCCCAAGGAACCACAGCTGCTAAGTGACTCTGACTCAAATCTGGGTGTGCCAGTTAACATCTTTGTTTAAGTCAAGAGTGGCAAATACTAGGCAAGTGTGCTCCCACCCTGTGCTCCCACCCCTGAGGCAGACAGAGCTAATAGCAGAAAACAGTGTTTCTTACTGATCACCAACACAGCCTTAGAATCCTTCTCCACAAGGTACTATGGGCAGTCACTCCTAACCCATTGGTGTTGGCCATCTTCTTACCCTACGTTAAGGTACTGGTTATAGAAAAACACCAAATTACCTTTGATCCTAGATGAAACTATTTGATGAACAAAAATCTGTAATGGTACCATCCTCATTCTTGCTAACTTCTAATAGAGGCTGTTTGTATTTGTATCTTGTATAAATTCCTAAGTTAGTTATAAACACTATATAACCCTCAACATCAGGATAGTTAAGGTTTTTTAAGCTCCTCTTTGCCTGCCTGTGGGAACAAAGACCTAAAGCAATTTATATTCTTAACCTAATATTTTAGATGTGAGGTGGAGGTGGTGAGGGAGAGGGTGGAGAACTTACAATTGAGGTAAGTCTGCCAGTTTCCATATTGTAGAATGGAGAATTCAGTGGTTTGAATAACTTTCACTATTTCCACTACCAGCACGCCCTGCCCAGGAATGGCAGAGCCATAGGATTGGGTGAATGCCCAAACATTTATAAAAGGAACACCCACGCCCAACCCCCAGCTGATTTTTCAGTTGTTCTTGCCAGGAGGTAACCAGTAGTTCCTGTGCTGTGCCCATTCTTACCAGAGAAAGCTAGGTGCAATCTAACTTTTTCCTTTTAGGTCCAAGACTTTTAAAATGACTCATAGTAGTTTCTGCTCAAGACACATCAAAAGAGATCCAAGACTATATTTAGGAACTTGCTATGAAATTACCTGTCAGTTGCAACCAATTTTTCCAATACAGTATATATATATAGTCAGTAGCAAGTAATTTATAATTTTCAATACACAAAAATAACTTGTCATTTTTTGTTGTTAACTGGTATCAAAATCTAGATTTCCTTAAATGGATGGACATCCCTACAGTGAAATTATATAACATTTGTTTAGCATACACATTAGTGTACTGGAATGACCTTCATGTGATCCATTATCATGGAACCCATTAACTCCTTGTTCATAAGAATGTTTGAATATGTCTTAAAAATGTTCTCTATTTGAATAAAGTTTCTTCCTAAAAGCTATTTTTGATGCATCTCTATTTGTAAAATTATAAATTGCTAGGCAGTGATAAAGAGAGTAAATCACAGTGACCGGTTTTGATTTGACACTTGGATGAAGTGAAAGTTAGTCACTCAGTTGAGTCCAGCCCTTTGCTACCCCATGGACTAGCCCACCAGGTCCCCTGTCCATGGAACTTTCCAAGCAAGAATACTGGAGTGGATTGACATTTCCTCCTCCAGGGGATCTTTCCAACCCAGAAATCGAACCAGAGTCTGCTGCATTGCAAGCAGACTTATGTCTGAGTCACCAGGGAAGCCCTATGGCTACTAACTAGGACGTTATCTGGAGTTTAAAAAACCAACCTCCTGCTGATGAGGATGTTGGAAAATTCTATGCGTGTAGTGTATAGTGAGCTCCATGTACCTCTTTTCTCCTGGCTTTTACTTTTGTTAAATGAGAGAATAAAGCAGCCGATTGTAAATTGTTCTACTCCCTGGTGGCTCAGACAGTAAAGTGTCTGCCCACAATGCGGGAGACCCGAGTTCGATCTCTGGGTTGGGAAGATCCCCAACCCAGGAGAAGGAAAAGGGAAGATCCCCTTCTCAGGAGAAGGAAGTGACAACCCACTCCAGTACTCTTGCCTAGAAAATTCCATGGATGGAGGAGCCTGGTGGGCTACAGCCCATGGGGTCGCAAAGATTCGGACACAACTGAGCGAATTCACTTCACTTTATTCCTAGGTGACCAAGACTTGCTAAAAAAAAAAAAAAAAGACAACCAAAGCCATTAACTGAATTATGCGAAAGAGTTTTACTTAGGATTAGTAGCCCACATGAAGTGGAGACAGGAAACCTGAGCTAAGAATTGTGTGATGCTAAGATTAAGATTACCAGAAAGGAACATTATAATTAAGACTAGAGATGATACCAGGGTTATATTAAATGGTGATTAGAAGCAGTTAAGGTTTGGTGAGAAAGGTTTAGTTATGTGTATTTCTTTGAAAAACTTCTTCCCCTTCATATTTCTAAGTCACTGTGTATTAAAACATCTAAGCCTAAACATTAAAAGTAAATTTTTTTAAAGTGAACAAACATGCCACTGCAGTTACCTGATGCTATGACATACTAACTGCATGAAAAATAGTCTACAGAGATTAAAAATCCTTTTGAATGTTAATTTACAAACATGTATCAGTGGCAAGTACCATGAGCTATAAACTGACCAGGCAAGAACAATGGATTGGGTTGCCATTTCCTTCTCCAGGTTTTCAGTGATATATGCTGATAGATAACCATATCAGTAATTTACAAATGGCGTTTTGGTGGTTCCGTGTTTACACCTACAGGTGGCAAAATATGTAGACTATCACCCTTTTCTAATCTTTATCAATCCATCAATCTATTGATCTATTTCTATATATTTAAACGTGTGGTCATATTATGTGTTCTGTTTTACAATCTGCCCTTTTTTTATTTAACAATATAGTGACTCAGTGCTAAAGAATCCACCTGCCAATCCAGGAGACAGACCCAGGTTTGAACCCTGGGTCGGGAAGATCTCCTAGAGAAGGAAATGGCAACCCACTCCAATATTCTTGCCTGGAGAATCCTATGGACAGAAAAGCCTTGTGAGCAACAGTCCATGGGGTTGCAAAAGAGTCAGACACAACTTTGTGACTAAACAACAATAAACATCTTTTTATGGTAATAAACATGTGGGTCTACATCATTTTAACAACCGAATTGTTTTTGATTGTGTGCTTAAAAAAATCTTCTCCACTTCAAAAATATTAAACTATCCATCTACATTGCTTTCTGGTTAAGCCTATCTCAAGCGTAGTAGTTGCAAACTTTTTCTATAAAGGGTCATGAATATTTTTGGTTTTGTGAGCCATACAGAAGGTCTCTACCACAACTACTCAACTCTGCCATAGTAGTGGGAAAGAAGACATTGACAATGCTTAAAACTAATGAGTATAGCTATGTTCCACTGAAATTTTATTTATGCACACTGCAATCTGACTTCACGTAACTCACATAATTTTTATATGTCCCCTCCCCCAAATAGTTTTCAACCATTTAGAAATGTAAAATCATTCTGCCTCTTGGTTTGCCAGTTATACAGAAACAGGCGGCACGCCAGCTTTGGGCTGCAGGTGCTTTCCTTCCCAGGTTTCGTCTCCTGCCATGAAGTGTATCAGTGTCACACCAAGATTTCTTTCAGTTAGATACTAGCCTTCTTTGAAAGTGTTCTCTTGATGGTACTGAGAATCCCTAAGG EMBV3_19346 CTTCTGGGTCATCTCTCCAGGACCTCCCAGATCAGTAGAAAGCACTATCGGTGGTTAAGC Gene GeneID:100336423|LOC100336423:XM_002695456:119_cdna Constitutive 0 NULL GeneID:100336423 18 GENE LOC100336423 NULL osteoclast-associated receptor-like EMBV3_12890 ACAAGCAACCACCACCCGAAACACCGCAGGACTGAAAGTGGGTGGCAAAGTCATATCCAA Gene BVT0102_420544 + 1 EMBV3_24153 GK000018.2:25555199-25580586 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06277 GCCATCGTTTCTTCAGTGCAGAGCAAAATCACTCAGGACCTCATGGCCAAAGTAAGAGCG Gene GeneID:512326|SFRS8:XM_002694457:65_cdna Constitutive 0 NULL GeneID:512326 17 GENE SFRS8 NULL splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila) EMBV3_26073 GCCATCGCTCAGCCTTGGCCATCGCTCAATCTCGGCACATTTTGCCCATTAATGAGGAGA Gene BVT0101_029784 + 0 NULL GK000001.2:83212904-83316636 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09837 CCTGGCAAATTTCTTTAACAGTTTGCTGAGTAAAAAGACTGGCTCCCCAGGAGGCCCTGG Gene GeneID:510330|DYNC1LI1:NM_001046052:80_cdna UTR3_Alt 3 NULL GeneID:510330 22 GENE DYNC1LI1 MGC137616 dynein, cytoplasmic 1, light intermediate chain 1 EMBV3_09653 CCAGCGTGACTTTGCCAGAGATGACATGGACTTTACAGAGCTGGTTGTGACCGATGACAG Gene GeneID:780806|ADORA3:NM_001079645:212_cdna Constitutive 0 NULL GeneID:780806 3 GENE ADORA3 MGC133776 MGC142828 adenosine A3 receptor EMBV3_06049 TACAAAGTACATAGCTTGGTGCCTAGCACAGAGTAAGGTTTCAATACGTGGTAGTTGTCG Gene GeneID:512545|ITFG1:NM_001038532:210_cdna UTR3_Alt 2 NULL GeneID:512545 18 GENE ITFG1 MGC128970 integrin alpha FG-GAP repeat containing 1 EMBV3_33968 GCCAAATCAGCCTTTTAGAAGGTGCTACTGCTAACTGTGGAGTAACTGGCAACAAGGAAG Gene GeneID:614932|ALS2CR13:XM_002685493:239_cdna Constitutive 0 NULL GeneID:614932 2 GENE ALS2CR13 NULL amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 13 EMBV3_29423 ACGTTCCTGGTCGGAATCACAAAAATGGGGGGAGCAATGTAAGGCTGAGCTGGGATCAGT Gene GeneID:525380|IER2:NM_001075871:28_cdna Constitutive 1 NULL GeneID:525380 7 GENE IER2 NULL immediate early response 2 EMBV3_06498 ACTGGACAGAAGATACAGAAAATCAAAATTGTCTTCCTGACATTTGTGAAAGCATTTTAG Variant GeneID:781788|ALKBH8:NM_001080341:29_cdna 533^628 1 EMBV3_05172 GeneID:781788 15 GENE ALKBH8 MGC152202 alkB, alkylation repair homolog 8 (E. coli) EMBV3_02376 GTCGGGTCAGTGGTGGGAGGAACGTGAAAGATGACTTGTGGCCTGTTTGTCACAGTTTCA Gene GeneID:533964|INTS9:NM_001046363:55_cdna Constitutive 0 NULL GeneID:533964 8 GENE INTS9 MGC128672 integrator complex subunit 9 EMBV3_35032 TACGGAGTCATGCATCCACAGTTGGTGTAAACGGGTCTGCTAAGAAAAAAGAAGGAACGC Gene GeneID:514679|KIF20B:NM_001105258:28_cdna Constitutive 0 NULL GeneID:514679 26 GENE KIF20B MGC157418 MPHOSPH1 kinesin family member 20B EMBV3_18472 AGCCCAGTAAAGGAAAACCGACTTATTCTGGACGCTCAGTTGCTAACAGGATGTAGACGG Gene BVT0102_247990 + 0 NULL GK000006.2:5566485-5703755 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206655 1 XLOC_125176 NonCoding TCONS_00206655 XLOC_125176 NonCoding NonCoding - 6:5591352-5592959 - TSS154162 1607 3 TCONS_00206655_2 63 0.119477286869944 1 0 0.000168423213843127 0.000199423273549417 0.000309701582526159 0.000381532134771361 0.000270720492137565 4.30561888030857e-05 3.28764680663706e-05 0.00057391044491509 0.000542012403169677 0.00306108884369139 0.00116133334276967 0.00153155934290875 0.000513572234855401 0.00114846829909202 0.000871159779552619 0.0205021138209903 0.0138922875080888 0.0122678080820753 0.000119228571838162 6.38036842814999e-05 1.36732190838709e-05 0.00829266195752083 0.00840765446131062 0.013481895997829 0.00021332365788055 0.000129890194183436 0.000267666223374023 0.00313874313189712 0.00366242241004156 0.00498906156846834 XM_005207577.1 MAD2L1 PREDICTED: Bos taurus MAD2 mitotic arrest deficient-like 1 (yeast) (MAD2L1), transcript variant X1, mRNA. 0.0 2679 98.20 0.96764156813939 XR_112596.2 LOC100507033 PREDICTED: Homo sapiens uncharacterized LOC100507033 (LOC100507033), misc_RNA. 1e-09 69.8 70.89 0.088985687616677 0 noncoding 0 0 0 0 -0.0526404600929106 0.672976002068289 -0.0518867388033559 0.499987841900416 ACACGCAGATAAGCACAACAGTGACAACAATCATTTGTTCTCCTTCAAGCTGCAGGTCAGCAGATTGCGTCATTCTCGCTTTACTGCTGAAGAGGCACAGAACTCTGAGGCTTCGCTTCAAACTTGTACACTGATGCTTTTCCACATTCCACTGACCAAGGCAAGTCTTATGGTTAAGCCAAACTTCAGCGGGAAAGGGAAATACACTCCTCCCCAGGAGATGGTGGGGAGAGGTGTGAAAATCGAATGAAAGGCTCTAATAGACCAGGGATTGGCAAACTTTTTCTGTAAAGGGTCAGTTTAGGCTCTGCAGCCAATATGGTCTCTTGCACCTACTCAAGTGAGTCAGTTGTTATGAAAGCTCCTCAGACAGTAAGTAAACGAATGAGCATGGCTGTGTTCCAGTAACAAAAAGCTGATGTGCTGTATTTGGTCCATGGGTTACAGTTTGCTGACCCTGTAAGAGATACTTTTGCTCTTTTGTTCGCAAATGTTCAAACCTGTCCCTGGCTCAAAGCAACTGATTCTCTGATACTTAAGGCTCACATTTAAAACATCATTATTTATTGAATCTATCCACAGTACCTCAAATGGGATGGCCCTCTATTTCATCTCAATCCCATATTGAAACAACTGGCTATTTCTTTGAGGTACTCCTCAGGACACCCTACAATAAATTTTTATCTGAAAACTTGGGAAGGGAGCCCCTTTGGCATATGACGCCTATGAAGAGGTTGAGAACAGCGAAGATGCTACATGCTTCTATTTTAATCACTGTATAAACATGGATGCTGAATACATTTTTATTACCAGTATGCATTCAGGTTCTTAGTTTCCTAACCTCCTATATGTTTTGTAATTATGAACTGAAAAATTACTAGCATAATAAAGTAGGTATCCACACACATATTTAATTTTTTCTTTACCTTCTGTTTCATGTAATTGTAAGATTCATCTTAATGTTATTAAATGTGAAAATTCAGGATAGCTGAAATAATGCTACATTGTAATACCTAAGTTTTCCACCAGGTGTCACTAATACTGTGAATTTCTTTTGACTCTAAAGACTAATATTCAGCTTTTCTTACTGAAAGTTAACATTGGGACTTCTGGCTACAAAAAGACGTCGGGAGAGAAAACACAGCATCTGTCCTTTGCTAGGCATTTTACATGAACTGTTTCATTTAACTCCTATGCTTTAGTGCACAAAAAGCACTGCAGGGCCAGTGGGCATGCAGACAGCACTATGTTTTAACGTTTGGATGGTCTCCTTTGTCCATGGCCACAGAAGTTCATTTGACTCCATACCAAGCACATCGAAAGGAGTGTTTCCTCACCATTTTCTTAGTGGCTCTTACCGTCTACATCCTGTTAGCAACTGAGTGTCCAGAATAAGTCGGTTTTCCTTTACTGGGCTTTAAGTTTCATTGGTGAGTTTGTATTTCCACCTCAGATGACTCTGACCAATGATGGGCAGCCACCAAAACACAGAGGACATTTTCCTATACCTTATCTATAGTGGCTATGGAAAAAAATCAAGTATGAATTTTCAAGCATTTGTAAACCAGTTTTCCAACTTACCAGGAGAATTGTTTATTACTCCTTNN TCONS_00202371 . 3' 1871 TCONS_00202371 . 3' 3477 EMBV3_41706 AGGTGTGGAGACAAGCCATAGAAGGGGACCTGTGAAGGGTTCAGTCATAGATGTGGTTAC Gene GeneID:100301215|LOC100301215:XM_002692336:130_cdna Constitutive 0 NULL GeneID:100301215 13 GENE LOC100301215 NULL similar to tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) EMBV3_12320 TCAGCTCCCGCTCGGCTCTATCACAAAAAGGTGGAGGAAGCCTTGACCATCAAAAACACA Variant GeneID:514789|ISCU:NM_001075683:5_cdna 178^402 3 EMBV3_02144 GeneID:514789 17 GENE ISCU MGC140639 iron-sulfur cluster scaffold homolog (E. coli) EMBV3_06882 GGCTGCAGTCCATTATCTCTGGCCCCTGAAGCTGTGTGCTGTGTTCCTCATCTCTTTCTT Gene BVV0102_182311 + 0 NULL GK000028.2:25050227-25073148 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37981 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00939 TCGAAGCTCACATGAAGAGCATGGGACCCTGAGTTGGAGTATATGCACTGAAGTGGGTGA Gene BVT0102_050333 + 0 NULL GK000023.2:13866951-14309127 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136209 1 XLOC_082424 NonCoding TCONS_00136209 XLOC_082424 NonCoding NonCoding - 23:14091144-14100897 - TSS101499 9753 4 TCONS_00136209_8 125 0.117809904644725 1 0 0.000830737976069956 0.000562230874828583 0.00041904766325549 0.000362715751558632 0.000536594504738101 0.000135336442911063 0.000420052517649844 0.000484803357934874 0.000552139845753666 0.000185833469460424 5.63317784502393e-05 2.74968143035345e-05 0.000186813669718474 0.000145417595872977 7.9480914268736e-05 2.70804536187512e-05 0 0.000262408552748829 0.000899338589529424 0.000429142257926489 0.000162011431241012 0 3.76254904817872e-05 4.98487139079021e-05 0.000280961662131749 0.000492669925565519 0.000404406772774155 2.46210338725147e-05 9.95509271912539e-06 1.84935598397292e-05 XM_005197495.1 LOC531699 PREDICTED: Bos taurus aldehyde oxidase 1-like (LOC531699), 4e-87 329 81.30 0.0352711986055573 0 noncoding 0 0 0 0 -0.0934918915886139 0.718783234959622 -0.141562978125252 0.232070202946567 GTGAGAGCTGGACTGTAAAGAAGGCAGAGTGCTGGAGAAGACTCCTGAGAGTCCCTTGAACAGCAAGGAGAGCAAACCAGTCTATCTCAAGGGAAATCAACCCTGAATACTCAATGGAAGGAGTAACGCTAAAACTCCAGTATTTTGGTCATTGATACAAATAGGCAACCCATAGGAAAAGTCCCCACTTCTGGGAAAAATTGAGGGCAGAAAGAGAAGAGGGTATCAGAGGATGAGATGGTTGGATGGCATCACCAATGCAATGGACATGAACTTGGGCAAACTTTGGGAGATGGTGAGGGACAGAGAGGCCTGGTGTGCTACAGTCCATGGGGTCACAAAGAGCTGGACACAGCTGGGTGACTGAACACAATGGTTGCCTACCACTGCTCAGGGACTTGTTACACACAGTCCCATCAAGTTTATAAAGGGTACGTTTTAGGAAGATAGAACCGTTAGGGAAACTAAAGTCTTATTTAGGCTTCAGAGAAAGAACAGGCCTCTGACCTTGCTTCTATGCTGCGTGGACACTGCCCTGACTGCCTGCCGTGAGTACAAGCCTGGCAGCACCATAGACAAAATAAGGGAAAAATCTTAAGACTGAGGCCTGGAGGGTGTCCAGCCAACCAAGCCCTAGGCTTAACATTCCAAGTTTTACATGACAGAACAAACAGCATTAACATGAAGCCAGAGCTGCAATTTGCTCACAGATCGACTATCAGTTTGCATCCTGGGATTATAAGCAGGAACCCCAAACTGCAATCTTTGAAGTCTCACCCACAGAGCAGACACTGTGGGGGCCTGTCTCCAATTGGGACTCCAGATGTGATGTGTCACGGGACTTCTCAGCACTATTTGAGTCCGGAGGTTGGTCAAAACCCAATCTGGTGATGCATCCTGTTTCTATTTCCTTTAATGTTAGTATATTGAAAGCAAGCAAGATAATTCTCTAATATTGGTATTATTTGTATATAATGAATGGCTTATTTTGTTAACAAATCCTTTGAACCTGAGATGAAAGTGAAAACTTCCAGCAAAAGGACCAGGTCTGAAGCACCTCAAGAATAAGTTAAATTGCAACACTTTTCCAACAAGGAGAACCGAGCCTGCCCAGACCTCTCACTTCTCCCGTGTACTGTGTTACCAGGTCTGACCCAGTTCTTTCCCCACATCTTAGACCTGAAAATGTCTCTTGGAAAGAGGGTTAAGCCTTTGTGGAACTTAACAGCAGGAGTTGGAAATAGACATTTGATAAAAGCACGCCCCACAGAAACTTCAGAGGTGTTGCCTTAAAGCAAGTGAGATGGTGGTTGGTGGTGAGCAAGTAGAAAAGAGGAACTAAGTCTATCCAGTCATTTCAAGGCAGCAGGCTCTGGAGAAAGACATATACATGTACACATTGAAGGATTCTCCAAACAAGTCCACCTTGACATTACTTGATGGAACTACTAACTCCAAGATCTGTTAGTGGTGTGCACTTCAGCATGAAATGCTTCAACCCTCCAGACTCCAAACTCACACTGTCACCCCACTAGGGCCCTACACTGCAGAATTTCACTGCCAAACATTCTGGAATCCTGAGTATGACTAAGTAGCTGATGAATATTCTCTTTAATCACAAAAGAGAAGTCTCTTCTTATGTAAGTCTGCACAGAGTTGCTTATAAGCCTGAGTAGGCATTAACAGCCCAGTTACCCAACTCCTATGCAATTCAAGACTTTGACAGTGGCAATATTAAATCTTTCCCCTTGAATTTCATATGAAAGTTAAAGCTTCAGCCATAAGACTTAGAGCTAGATTAAATTGCTACTTAATAGTCTTGAAGCTGCAGGCTGGTGAGCATCCATTAGGCATGCACATAGGCTGCTTTTAACTAGAGCTCTGAGTGCCTCAGGGTGAGGTCAGAATGAAATTTCTGGAAGGGTTCTCAGCAGGTTGAGTTTCTTAGGGTTTCACCTACTTTAAGAAAGCATACTAACAAGTCCATGGAATATCTAGTTTGGAGGAGCTCATAGGAAGGTGGCCGGTCCTAAACAACTATCCAGATAGAGCTAGTTTCAAAGAATCTCAGAAAGCTGATAAACCAGCTTCAAATAGTTACTATTAGTGTTACTTCCTAGTTTCTGTCAACTTTCTAGTCTCAGAACTTCAAGTTTGAAACAATGGTGGATCTGAACAAAGAGAAAATAGAAACAGTCCAGAAAACCGGATATATTGGGTAGAGGCTAAGATGTAAGTAACTGGTCAAGTTAGCAGGGACCACTTGCAAACACAGCTGGAGGGGGTGATAGGAGCCTGGGGCATTCTCTCTCCAAACCCAACTTCCCAGCATCCCCAGACTGGCAGAGTATAGAGAAGACCCCCCTTTTGAAGAGCTAAGTCTGGTCTCACCTGAAAGCATCTCTAACAAGATATGCCTTTTGATGGTGTAAATGTTTCTGACTAGTGTATGCCCCATTTCTCATAGCAGAATCTTGGCCTGTCACCCCCTGCACAGCCATGGTAAGGGGTATCTGAGGCTCTTGGGTTGTTACAGCCTCTGCTGAAGCCTTTATCCTAGAGTCTTCCTCTCACCACATATCCTGCTCTTGGCTTCTGCTCTGATTAACTCTACTTGTTAAACCCTGCCACCTGATACTGCTTCTTTAGAGAGGGCATTCCTTCCACTAGGACACCTCACGTTGCCTCTTTAAACCCATTGCACCCCCACAAGGCTGCCTTCTCTGCTGCTTATCCAACGCTGGGGGTGGTACTGAGTTACTTGTAGTTGGATCTGGGTAGCTCCAATATGAACCAATTCCAAGCACGACCTTCATCCTTGTTCAATTTAGCAAGAGATGAGAGACCCTTTAGTACCTTCTCCCCACAGTACTTCCAGCTCCAGCACCTTACACCTCCCACTCCTTTGACAGATCAGCAGGTCCTCCTCACATGCTGCCCCTCAACGAGGGCCATTGGCATTGCTGTAAGCATGCCAGGAGGAGGTCCTATCACAGAGAATGTTGACAATCAACCCACTTTAGCAGTTAGCCCAGGAGGTGGGACCGACACTCCTGCCAGTCAGCATGAGTGTTTGCCTCTTGTTAATAGATCACCTGTATCTTCATTTCTAAGTGGTTATGTAAAAGATGCAAAGAGCTCATTAAGCCAGAGGAGAGATTGCTAGAACAAATTTTTCCAGCTCGATACAAAACAAAACAGGTACTCCCATCTCTCACTTGTGGTATATCCCAAGGTAGTTTCTCAGAAGTTGTCATGTCTAATGCCGGATGGATGAGGGGGAGTCCTTCTGAGTGTGCACGTGAAGTCCTTAAGCAACAATGATGCTCAAGAGACTGAGGATTGGACCTGGCCAGGAAAGGAAGAAAGCAGGCCTCAGGTAGCAATACGGAGATCTACAGATCCTCTTGAAGGGAGAAGGCTTGAGGACACAGTTTAGCAACAGGAGAGGTGGATATAGTGAGCTTGTCAACACCCCCACCCATACCTGCCCACTCCTAACCAAATGACACCCAGAGGAATTTGACTTGGGTGAACTGGGCAGGTGGGAAGCCTTGTCCTTCACTGGAATTCTTCCCAGTTAAGCCCCTTGGCAGTTAACTATCTGAAAAAGCAGCTCAGATAGAGTTCATTCTCTTTAAAAGTGCATGACACAGAACGAGAGTTCATCCATACCAAGGCACCAATGGGATGATTTAAGGAGACCATGTCCCCAGTCACTGAGAGCTCCAGTCCTAAGTGACCAGGTCCAGTAACGCACAAGTTGGTGGACTTCCAGTATTTGTCAATTGTGATTCAAAGGGAGAATTTGGTTCTCAAAAGCTTTGGGAGATTTTTTCTAATCACTTAAGACGTATGCCTACTTACACAACACCTACCCAAACAGTAGCAACTGGGGCACAGGCATACGAGACTACCCTAGCAACACTAGACCATGGTGCTGCTCTCCACATGAAGCGAGGCAGGGGAGCATGAAACTCCCTGGCTGGAGATGAAAAACAGGACTGACTTCCCAACAAAGCACCAGAGGAAGAACCCCACAGCCAGAAGTGTACTCAGTCCTGAAAGAGCTTGGAGCCCAGTTCCTATAGTGCCCTCACAGATCCCACCTGCCCCTCCCACCTCCAGCCATATGCAATGAGCAGGGTCAGGTGGGACCCATGGACTCAAGCTGACGTTAATTTTCTACCCTTCTTTCCTGCTTGAGGGCAAGAGTGTGTGTCTCTTTTCTAGCTAGGTAGGGCAGATCTCCAGGAGATTGTTCTGTCAGGCAAGATACTTCTCTTGAAAACCTCAGACCCTTTTCCTCCATACCCAACACCCCAAACCTGGGGGAGAAAACTCATGAAAGTAGGGAGGCCCCTCGAACTGGGTCCTTTAATGCTTACCCTTCAAGGGAAGTCTACAGATGCCTCCACTGGTTTGTTACCCTGTAAGCGATCCTGCTGGTTACTCACTGGTTTTTCTGTCTGTCCAGTTTTCAGGACAGAATTTTGTCCTGTGATTTCAAGCCTCTGATCTAAGAGTTGTTGATTCACTTCGTTCCTCACTCCTGTCCTTACAGCAGAAGTCAACTTTCCAAGCTCTTTTCATTTGGGGGCAAAGAGTCAGAGTTAGGTTAACTTAGAATAAGAGTATCTCAAGTCAGCAAAGAGGGTGACAATCAGGGACATTTCATTGAAATCTTTTGTACTGGCTTAGAACAAGATTCCCTTTGTGTTAATATTTCAAGGCATGGAAACCTGAAGTCCTGTTCCATTCTATTATTGAAGCAAGGAAGGCCTTTAGGAAATTCCAGGGGCCCTGAGGAGGGCCACTGCCCAACTAGGTATGCAGCAAGTCTTTAACTTACAAGAATGTCTAAAATGGGCAGAAAAACTGCAACATCCTTAATACAAAGTGCTCCTTTCCAAAAAAGCAAAGTAATTGGGAGATTGATATTTTTTTAAAGAAGACTTCATAGGAAAACAAACTCATTCTGAAGTTAGGAGTATGGACAGATCTGCAGGATCTCAAGCTTCTCTGGGATTCTCATCTTGAATTGAGGAGGTAAAAGCAGAAACCATTTACTCTTAAGATTTTCCTTCTACCAGTTAGGTTTTCCCCACTTCCCTGGTGGCTCAGACAGTAAAGAATCTACCCGTGCAGTGCAGGAGACCTGGGTTGCACCCCTGGGTCGGGAAGATCCCCTGGAGACAATAGCTACACACTCCAGTATTCTCGCCTGGAGAGTTCCAGAGACAGAGGAGCCTGGTGGGCTACAGTCCATAGGGGTCGCGAAGAGTTACAACTGAAGGACTCCCACACTAAAGAGAAATTCAGATGCTGACTGTTAAGTGAAGGGGTTGTGAAGATTTAAAGCAAGTTCCGGAAGAGTCTGTAGTGGTTAAGACCCTTGGGTCTCTGGGAAGTGGTTGAAATAGCCTTCCTGTCCCCAAAGAAGGTCACTGGGACATCCCAGAGGGGTGAGAGGAACCCAGGGATGACTGATAGTGAAACAAGAGCAAGGTTTCAGTTTGCCTTTCACCTCAAGTTCCCTGAAGAACGGCACTGAAACATGTATAATATCATATATGAAATGAGTCGCCAGTCCAGGTTCGATGCATGATACTGGATGCTTGGGGCTGGTGCACTGGGACGACCCAGAGGGATGGTATGGGGAAGGAGGAGGGAGGAGGGTTCAGGATGGGGAACACATGTATACCTGTGGCGGATTCCTGGTGATATATGGCAAAGCCAATATTGTAAAGTTAAAAAAAAAAAATGATGGTCTTTAGCTTAAAGCAGAACAATTCAATGTTGTGAAGCCTATCTCCCCACCCAGGGCTTCCTTTTAGTCTTAGACTGAGATTCAAAGCTATATTTCCTCAAGTTACCCTAACACAGTCGGGGCTGCCATAGGACCACCACTTGTAATATCAGACTAGACACTTTATGAACTGGTCCAAAGTCTGCCCCAGGCCGATGGAGCCTGATGAGCCAGAGAACAGGGAGTCAAGTGTTCAGAGCCCAGGCCATCTCTGTAGAGGCCCATGGCTTATGACAAGAGTCCAGCTCTTTATAAACCAGAGCTGCCCTCAAGAGAGCCTTCTCCCCTGGGGCACAAGCAGGGAGGTTCCCTTATTCCTCAAGGGGTGGCTTCTGTTCTTCCTGCCAGGAGGCCTGAGCTTGAGGAGGACCTGGCTAGTGAACCCCCACTACCTGTCACCCACCACTGGCCCCAGGATAAGCCTGAGCTACAACAAAGGCTATACAGTTTAGTGATAGAGAGGAGACCCCAGGAACCAACTTGGAAGAGGGAGATGCTGCCAAGCTAAGGCTTGAGGGTAGATTACACTAAACAAGGAGCTATGCAGAGAGAAGCCTTTCAAACAACCTTGGATGGAACAGGTATCCATCGACTTGGGCAGGTATATGAGTACTGGCCTGTGCGTAGTCATAGGACTGGCAGTAACTCAAACCTCCCATGATCATCACCGAAGCCTCATAGCTCAGAGTTAGCTTTTTAGCTTACCCATTGTAACAGGTCAGATGCTCAGAATTTAAGCAACTTATTCAAGACATGGGAAATAAAAGGCAGAAACCAGGCTCAAGCAGTATGTGGCCCGAGGTCTGTGACCTCAACCTTTCAGTTTTAAGACCCTCCATGGCAAAAGAATGTGGTGAGCCAGTTTCGAGAGCCTGGGAGCCAAGCTTTGTCACGAGCAGCTTCCCTATGGCTAATCTATAGTCTAGATTCTGCCTAGTTCTGGACCATCTTCCTTTCCACTCAGGAGTCCCCTGGTATGAAGAAAATAGAGTACAGAAAGTCCAGACAAGCAATTGGACTTATCAGTCCAGTAGCAGCAGCAGCTGGCAGCCCTGTGTCGGCACTTACTTAGCACACTCCTACCTGGCTGCCAGCTGAGTAAAGCTAGGACCGCCCACCGCCCCCCCTACCCAGGACTATAATGTGTGATTGTGTGCACTTCATGACCTGGCAGAGCGCCCAGCGTCACCTAGGCAAAGTTGGTTCTGAGTGATGGCCCAGACTACTGCACAATACCCAGGCCCTTTCATAGGCTCTGGCACATATCAGACTGGGTTTAAGCCCCCACCATGTGCCCATCATCCTTTTGCCTCCCCCAGGGACTTGGCACTAAACCGAGTGCTAGGGCTGAATGAGTTCCTGGCTTATTACGAGATAAAGTTACAGCTCTGGCTACACACCACTGAGACTAAGAACTCAGGTTGTAGCCAGCGGCACTTGTAAGACTGTAGCCTCTCTCTAGAGGTCCCAATTCCTTGTCGACAAGGAATCCAGCAAAGATGCTTCAATCTAGAAGGTCAAGATTCTATTGGTCCCCCTGCTTTCAGTCTTTAGGGCAGAAAAAGCTTTCAGGTTAGCTGGCCCAGCTCTGACCGTGTTAGAAAGTCAGCTATACTTTGAACCCTGAGCAGTTAACAAGCAACCTTTCATCCAGACCTTAAGATGTGGCATTTGAAGCAACTGTTCAGGACAAGAACAAACTCATACAATCCAGATAGTCTGCCTGGGTAGGGGAGGGAGCTACACAAGCATAAGGTACCAAGTTGGGTTCAGAGAGGTGCCAGGCTACAGGAAGGTCATAACATGGAACAGGAGTTTCATGCTACAGGGATGAAGGTGCCAAGACGCTTGTGGCACAGAACCCCATGAGCCCTGCACTAACTCTGTGAGGCAGTCTATGGGGCAGCAGCTAGAGTGTACTGAGCACACACCATGATGGGTACTGGTCTACAGTCTCCTATCGCCACAAGATCTGTCTAAGCCAGTTTCCCAGAGATTGGTAACTTGCCCAGGTTATCAGAGCTAGTAAGTGACACAGCCAGGGAAAGAACCCAGGTGAGCGGCAGCCTGTATCCTGTCACACCACATGACTATGAAGGTCTCTCCACGAGACCAAGGCTCTCGTCAAGTGGCTCCGCAGACAAGACCTGAAAGCAGACAGATTCCAGACCCCAACACTCCCACCTCCAAGGTCAACAATTTCGACGGAAGCTTTCAGTTGTCTTCAGAGGAGCCGCTTTAGAAATTGATGGTTAAGCCCTCACCAAGTTTGACCCAAAACTGGTTCAGCTGGACGAACTCCACATCAACTGGTCATGCCCAGTTATCAGGTGAGGTCAGCACCAACCACTCGTTTCCCACTTCAGCAGATTGAACTGCATCTAGGCCCCAGGTTCTCCCACTTTTCAGGCCAGCCCATGTGGTCAGTTGCCTGCTGCCTCACCTAGAGTTCTTCTGAACACTTAAGACTTGCCTTGCTTCTCTAGAGCCTTCTGCCAGTTGGAGTTTAATACTGAGCCCTTCCACACAGTCACCACAGTTGTTACAGGCTCTATGAGCTACTCTTCAGGTGAGCGAGGACCTACATCTAGACCTATGCCAGCAGGGAGCCCCCAGGAGCCCTTTACCTGTGATTCTTTTTAGAGAAACTCTAGTCAGTCCAGTTTCTACTTGAGCACTCCCCTGGAGTAGATCCTCGCCCTCCCCAGGAGGATTTGAACAGCACAGACTATAGGAGAAAACCATCTCCAGGGACTGATGGCTTAACTATGACCTGCCGTCCCAGTTCAACTCATATTGATATTCTTTTCAGCTGGGGAAATGAATCCCCAAACATTTTAGTTTTTGCCAGATTTGAGTTCACATCTGTGCTGGATTTGCCAATAGCAAGTCTACTCTGTAGTACCTTATTGCCAGAGGAAAACTTTAGGATGCTTAAGAGAAGGAAAACAAGTGGGAGTGCCTCACCTCTGAGACCTGAGCACAGAAGCCAGGCCACAGGTTGTTTGAAAACAGGTTTGAGCAGGAAAGCGTCATCACCCTATCACAGGAAGGGCTAATGCTGAGTCTCTGCTTGCTGGAAGTTTGAGTTTTTGGCTTTGGGGAGAAAAGTCACCCACTTCAGTGCATATACTCCAACTCAGGGTCCCATGCTCTTCATGTGAGCTTCGAGTTCATACCTGTGGAGCTAGGTATCCCCTCTGCCTGTTGATATAGGCCGTTAGTCCCCGGAAGAACCCACTCCCAGAAAGATCTTCCCTGGGAGAAAAGACAGCTTCCCAAAGAAACTGGAGCTCTGTTTTATGTACCAGGATTTTTTTTTTTTTTTTTAAGGCTTCAAGTTGGTAAAAGAAAACCCCTGAAGAAAGATTTTTACACAGAGGTTGATGTGGGGCCTTGAGCCAAGGACTATCAGACAGTCTCTCAAGAAAATTCTCTCCGAAAGCCTCTAGAAGGAATCACAGCTTTACCAACACCTTGATTTTAGCTTTGTAAAGACCCTTTTTTCACACTTCTGACCTCCAGAACGTTAATAAATCGGTACTGTTTTCAGTCACACACAAAGAGGCTTTTCAGATGTAAGAAAGCAGGCAGAGAAGGAAAAAAAAAAAAAACAAAAACACAAAAAACCCTGGGAGAAAGAGGCAGGGCTTGTGTTCTTATGACCCCAGGACTACCTGTGAGAAAACAGAAGAGAAAATCCACACAGAAGAGCACTAACAGAGACTAGTGTGTGGAGAGAGAGAGCCCTACATCCCTATTCCCAGAGTTTTCTCTTCTGAAACAAAAGGAAGCTTTATACCCTACCCTCTAGGCTTAATCTGCTTTCCCCACTCCAACCCTGAGAAACCTTCGGCAGCCACAACCACCCCAACCAAAGAACACTGAGGCACAGACTGCGGATTTTATAGGCTATAGAGACTAGTCCCACCACCCCCCCACCC TCONS_00134160 . 3' 107733 TCONS_00134160 . 3' 117485 EMBV3_22705 AGGTTAAACGAGTTGATAATGGTTGCCTTTGAGAGGTCCAGTGTGGAGTGAGGGCATGGG Gene BVV0101_022205 + 0 NULL GK000002.2:4723915-4780175 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25864 GAGCTCTGCATTCAGCACATTGTCAAGAACTTCCAGAACAACCCCATCCTGAAGCAGCTG Gene GeneID:523600|TCTE1:XM_002697302:144_cdna Constitutive 0 NULL GeneID:523600 23 GENE TCTE1 NULL t-complex-associated-testis-expressed 1 EMBV3_00769 GGGCTGTGCTCATATCCCCTAGGACAAACAAGGAAGCCAAATGATCCATCTCGCTGATGT Gene GeneID:280887|OTC:NM_177487:4_cdna UTR3_Alt 2 NULL GeneID:280887 X GENE OTC NULL ornithine carbamoyltransferase EMBV3_02945 GATCGTTGGACGAGTCCTTTATGCTTACGGGTATTAGACAGGAGTACCCAGTAAGCGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32966 GTGCTTATGCGTTTGTGCACCTGAGTGATAGTATCTAGGCGATCAGTTCCTAGTTGTGGA Gene BVT0102_405388 - 1 EMBV3_19884 GK000022.2:11405984-11457899 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21103 AGCAGCTCAGGTCCTAAACAAAGCTCAAAGGAAGGGCGGTAACATCACCAGTAAGTCGTG Gene GeneID:617598|TMEM20:NM_001076470:252_cdna Constitutive 1 NULL GeneID:617598 26 GENE TMEM20 MGC133623 transmembrane protein 20 EMBV3_27842 GTGCAGTGGAGGAGTATTTCTTCCGCAATGGTGAGCCAGCAGCTGCAGACCATGTTCCAC Variant GeneID:511210|TSR2:NM_001035097:17_cdna 191^282 1 EMBV3_38391 GeneID:511210 X GENE TSR2 MGC127825 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) EMBV3_35541 CCTTCAGGATCTCTGTCTTGGAGCATGAGGGAGTTGGCAAGTTAAATGTAGAAAGCAGGC Gene GeneID:527023|SLC40A1:NM_001077970:33_cdna Constitutive 0 NULL GeneID:527023 2 GENE SLC40A1 MGC142698 solute carrier family 40 (iron-regulated transporter), member 1 EMBV3_41139 TATATATGGAATTATGGTGCCCTCCCTCAGGTTCTTTCTCGTGGAGAAGTTGTTCATGTG Variant GeneID:615820|PPA2:NM_001076396:80_cdna 446^532 1 EMBV3_35477 GeneID:615820 6 GENE PPA2 MGC137465 pyrophosphatase (inorganic) 2 EMBV3_09313 GGCGAAGAGCTGGACTCCCTCGACGGCGGGGACGAAATAGAAAACAATGAAAATGATGAA Gene GeneID:533175|CHD7:XM_002692670:29_cdna Constitutive 0 NULL GeneID:533175 14 GENE CHD7 NULL chromodomain helicase DNA binding protein 7 EMBV3_33928 CAAAGTATTCTGTTTCAGCAAGTGCAAATTTTATTCTAAGTTCCAGAGCACTATATTTAA Gene GeneID:534223|SCN3A:XM_002685332:173_cdna Constitutive 0 NULL GeneID:534223 2 GENE SCN3A NULL sodium channel, voltage-gated, type III, alpha subunit EMBV3_00118 CTTGGCCTGCTAGGGGAGGAGACCCGCCAGCTGTTTGAGTTTGACAGCACCAACATGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12030 GTGATATTGGAAAGACAAGTGCTGGACCAGATCATGTCTATGAAGTGGCCAGGTTTCATG Variant GeneID:614262|VSIG4:NM_001046529:124_cdna 632^736 1 EMBV3_23570 GeneID:614262 X GENE VSIG4 MGC137243 V-set and immunoglobulin domain containing 4 EMBV3_26300 GTTTTTCTGGCCTTGTCCCTCCTGTGGCAGGCACCCCACAGCTGGATCCTTCATTCGTCC Variant GeneID:505066|TBCE:NM_001038032:72_cdna 207^291 1 EMBV3_29555 GeneID:505066 28 GENE TBCE MGC133938 tubulin folding cofactor E EMBV3_34573 TGCCCAAGTGGACCAGAGTCATCCTCCTGAACTGGTGTGCCTGGTTCCTTCGCATGAAGA Gene GeneID:282178|CHRNA7:NM_174515:16_cdna Constitutive 0 NULL GeneID:282178 21 GENE CHRNA7 NULL cholinergic receptor, nicotinic, alpha 7 EMBV3_30678 AGCATATTGTCTGGATTCCCCAGGTAGTTCTAAGTCACCAAGTGACAAAAGCAAGATTAC Gene GeneID:526127|FRMD4B:NM_001102099:47_cdna Constitutive 0 NULL GeneID:526127 22 GENE FRMD4B MGC157269 FERM domain containing 4B EMBV3_11549 CCCAGTGACTGTGGTGTGTTAGATGCGTGAGTACACTCCGCTCATGTATTCTTCCTTTAG Gene GeneID:100138449|LOC100138449:XM_002695446:93_cdna Constitutive 1 NULL GeneID:100138449 18 GENE LOC100138449 NULL similar to zinc finger protein 211 EMBV3_35041 CCGCCGCTTCCACCAGAGCACCAAGCTCATTCAGCACCAGCGCGTGCACAGTGCAGAGTA Gene GeneID:523865|MZF1:XM_002695452:109_cdna Constitutive 0 NULL GeneID:523865 18 GENE MZF1 NULL myeloid zinc finger 1 EMBV3_30970 TGCTGCCCCCATTCTGTCCTTGTTTAGAACATTGAGAAGTTTCCTAGGGCACATGCTGGG Gene GeneID:533729|PAK1:NM_001076898:28_cdna UTR3_Alt 2 NULL GeneID:533729 29 GENE PAK1 MGC139676 p21 protein (Cdc42/Rac)-activated kinase 1 EMBV3_07267 AACTTGGGAAAGTTAACGATCTGCCCGGATCTAGAGGAAGACCAGGAACGTCTTGCCGTC Gene GeneID:767926|COMMD3:NM_001076999:163_cdna Constitutive 0 NULL GeneID:767926 13 GENE COMMD3 MGC128365 COMM domain containing 3 EMBV3_30259 TCTCAACGAGTGTTCTGCCACGGGGCACCCCCTTTTGTTGTCTTAAATATGCAGCATTGG Gene GeneID:538768|C14orf28:NM_001046441:280_cdna Constitutive 0 NULL GeneID:538768 21 GENE C14orf28 MGC137124 chromosome 14 open reading frame 28 ortholog EMBV3_42751 GGCAGAGACATGGGGATAAAGGATGGACTAAATCTGGGGGATGTAATATACAGCAGAATG Gene BVT0101_016816 + 1 EMBV3_19891 GK000018.2:63558258-63565628 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087614 1 XLOC_052548 NonCoding TCONS_00087614 XLOC_052548 NonCoding NonCoding BOSTAUV1R428 18:63562758-63573769 x TSS65039 1590 2 TCONS_00087614_2 75 0.19748427672956 2 0.855767484105359 0.00022248079740462 3.03434896048195e-05 0.000349206386046241 7.83410451664929e-05 0.000239095581085478 0.000388882298586164 0.000176051472818118 0.00109738404890948 0.000868410860065779 9.30289997955305e-05 7.28721957525498e-06 0 0.000126505178654996 0.00010651234104067 0 1.9515733034307e-05 0.00107669144085627 0 0.00016687067201175 0.000247781428494856 0.000118374186842402 1.1564097326559e-11 0 6.74272199589895e-11 0.000395004609788185 9.30533603811747e-05 0.000103177112904243 3.93248585129665e-12 3.21685934417769e-06 6.42818618863332e-05 XM_005193489.1 MCCC2 PREDICTED: Bos taurus methylcrotonoyl-CoA carboxylase 2 (beta) (MCCC2), transcript variant X4, mRNA. 2e-31 141 72.66 0.156603773584906 NM_013269.5 CLEC2D Homo sapiens C-type lectin domain family 2, member D (CLEC2D), 1e-09 69.8 83.33 0.0408805031446541 0 noncoding 0 0 0 0 -0.0595570888876969 0.605006533147444 -0.0595570888876969 0.605006533147444 CTGAGCACCTGCAGCAACGTGAGGAGAAACAGTGACTTTGGGCACCTAAGGCGTTTCTAACCTCACGGCCGACCTCGCTCCTTTTCCCACCACAGCGGCGGTATTACTTCCGCTCAAAGCAGGAAGCGCGTCCTGGCCTCCCCTCCCAGCTCTTAGTCGCCCCTCTTCCCGCCACTTCAACGGTCTGGTCCTTCAGGCTCAGCCTCCTGGCTCCACCTGCTGAGAATCACCTCAGGAACCCCTTCAGTCACCATGACTGACTCGCTCTCTTCAAGATGAAATTCTTACCTTTTTGTTCCTTTCCTCCTCTCCCCTATCTCTTCCTGATAAATCGTGAGCTCTCAGAAACAAGAAATACTCTCCCGGCAGATGCAGCTGTCGCTGACGAGCACCGTGGCTCCCGGCCAGCCTCTCCTTCAGCTGTGGCTCGTGCTGGAGCTTCTGTGTGCAGGCACCACCTCCGATTTTGCTAGAGTTTACCCGGACAAGGACCTAAACACGTACCATGCTCTCGCGACAGTTCCGAGACTCTTACCCCTGCTCTCGCGACAGTTCCTGGAAAGAGGACTTGTGCACATGCTCCTGCTCTCGCGATAGTTCCTGAGGCACAGGCCTGTTCAGACACCTCTGATCTCGCTGTAGCTCCTGGGGCTCGGAGATGGACAAGTCCCCCTGATATCCCGGCAGCCTGAGGAAAGACCCCGGACAGGAGATATTTTTGAAGGGTATAAAGGAAATGTAAAGGGGTCTGGTTGATGGCTGAAAGGGAGTGAGAATTTTAAAAAGTCACCAGAACAGACTGAAGAGCTCTGAGGACTGGAATTTAATTCTACTGGCATGGGGAGTGCCACAATCATATATAACATTGAAAAGCATGAACTTGGGACTATGTGGACAGTGAGTGGAGAGGCAGAGATACCTGGGAAGATGCTGCGACCATGAGGCAAGAGGTAGCTGTGGTCTTTACCAGAGTAATGGCAGAGACATGGGGATAAAGGATGGACTAAATCTGGGGGATGTAATATACAGCAGAATGACTATAGTTAATAATACTGTTTTGCATATTTGAAAATTGTGAAGAAAGTACATTTTTAAATCCTCCTCACAAGAAAAACATTGTAATTGTATATGGTGATGGATATTAACTAGGCTTATATAGTGATCATTTCATAATGCATACAAATATTGAATGATTATGTTGTATACTTGAAACTAGCACATGTTATATATCAGGTATACCTCCGTATAAAAAAATGGACTAGGAATGGCTTCAGAAAGTGGAAAGGACAGGACATGGAGACTGGATGGGAGGATGAAGAGTCAAAGTGGGGGCCCAGATTTCCAGGCTAGGGGGATGGAGGCATCAACCCTAAGATGGCAGGCATAAGAAATATAGCTGGGGCAAGGGTGAGAAGTATATGTTAGTTTTTTGAATAAATTGTTTAATTATAGAATATATTATTATTGTACAAATGTCAACACAAAAGAATTAAAATTCCTCTATTCTCCCTCTCCCCCCCAAAATGGGCAAAGGACCTGAACAGACATTTTTCCAAAGAAGACATACAAAGAGTTAAAAGGTGCATGGAC TCONS_00084812 r 5' 1990 TCONS_00084812 r 5' 1990 EMBV3_38688 CTCGACTGCCAGGAGAGATTCGCATTACTGGATTCTGCTCTAATACTTGATGTTCCTCTG Variant GeneID:533622|MTM1:XM_002699667:23_cdna 182^276 1 EMBV3_37265 GeneID:533622 X GENE MTM1 NULL myotubularin 1 EMBV3_17965 TCCCCCGGTGTTGTAGCCAAGCACTAGACATGGACAAGCTGTAAAGGGAGAAGCTCAGTT Gene BVV0102_029063 + 0 NULL GK000013.2:47449391-47492958 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045318 1 XLOC_026410 Coding TCONS_00045318 XLOC_026410 Coding Coding RASSF2 13:47489459-47548240 j TSS33103 5523 1 TCONS_00045318_1 326 0.0758645663588629 12 0.906243620279007 6.63078167967584e-12 6.96085090187892e-12 9.29596657968533e-12 2.20279573057277e-06 2.87925649929542e-05 3.02658894450852e-12 1.99459975761052e-05 1.55876338186614e-06 8.35510544876834e-06 0.000319402807420766 0.000322172837400632 0.000502072144537151 7.61104488326935e-07 1.98277311471962e-05 2.51294524215202e-12 0.00544397365877996 0.00374736522502185 0.00489173295370293 2.45731260103982e-05 3.64441959313894e-12 1.42161440342736e-12 0.00582220154060452 0.00258410109285236 0.00409480598852846 3.84859229194057e-12 8.09828781121906e-12 1.54382419678324e-06 0.00144423008357973 0.000760558160802718 0.00215123585859569 NM_174593.2 RASSF2 Bos taurus Ras association (RalGDS/AF-6) domain family member 2 (RASSF2), mRNA. 0.0 3094 98.01 0.325728770595691 NM_170774.1 RASSF2 Homo sapiens Ras association (RalGDS/AF-6) domain family member 2 (RASSF2), transcript variant 2, mRNA. 0.0 1602 84.40 0.259641499185225 TCONS_00045318_1 sp|P50749|RASF2_HUMAN RASF2_HUMAN Ras association domain-containing protein 2; 0.0 627 95.40 0.996932515337423 1 coding 0 0 0 0 -0.133964106544887 0.378265545467421 -0.00461525410827571 0.932652335637979 GGGGCAGGAGAGAGGACGAAAAAGGGCGGAGGGGGGCGGGGCGCCCGACCCCCAACTGCGCGGCTGCAGCAAGCTCTGCCGAGCTGCTAGGGAGCCTGGCCCGCCGACTGCTGAACGAGCTCCGCGGCCACCCCCGCCCCCCTACTTTCCAATTCCACGGTCCCCGCAGCGCGCGCGAGATGCAGCCGGTTCCGGACGCAGGCCTCTTCTTCTGATGAAAAGAGAAAGGAAGAATGGACTACCATCACCAAACTTCCCTAGTCCCGTGTGGACAAGATAAATACATTTCCAAGAATGAACTTCTTCTGCATTTGAAGACCTACAACTTGTACTACGAAGGCCAAAATTTGCAGCTCCGACATCGTGAGGAGGAAGATGAGTTTATTGTGGAGGGGCTGCTGAACATCTCCTGGGGACTGCGCCGGCCCATTCGTCTACAGATGCAGGATGACAATGAACGCATTCGACCTCCTCCATCCTCTTCCTCTTGGCACTCTGGCTGTAACTTGGGGGCTCAGGGTACCATCCTGAAGCCCCTCACCATGCCCAACATTCCGATCTCAGAGGTGGATGCCCTGCCTGAGAGTGATCAGACACTGAGCCCCACAGACTCCAGGGGCCTGAAGTCCCTACAGGAAGACACCCCACAGTTGATGCGCACACGCAGTGATGTTGGGGTACGTCGTCGTGGCAATGTGAGGACACCCAGTGACCAGCGGCGAATCAGACGCCACCGCTTCTCTATCAACGGCCATTTCTACAACCACAAGACATCAGTGTTCACGCCAGCCTATGGCTCCATCACCAATGTCCGCATCAACAGCACCATGACGACTCCACAGGTCCTGAAGTTGCTGCTCAACAAATTTAAGATTGAGAACTCGGCAGAGGAGTTTGCACTGTATGTGGTCCATACCAGCGGTGAGAAACAGAAGCTGAAGAACACGGATTATCCTCTAATTGCCCGGATCCTCCAAGGCCCATGTGAGCAGGTCTCCAAAGTGTTCCTGATGGAGAAGGACCAGGTGGAGGAAGTTACCTATGATGTGGCTCAGTATATAAAGTTCGAGATGCCTGTCCTTAAAAGCTTCATTCAGAAGCTCCAAGAGGAAGAAGATAGGGAAGTCAAGAAGCTGATGCGCAAGTACACTGTGCTCCGCTTGATGATTCGGCAGAGGCTGGAGGAGATAGCTGAGACCCCAGCAACAATCTGAGCCACTAGAAGAAGGGGATCCAGATGCTGCAGAGGCCATTGTGGCCCAGAGAAGACTCACAGGAAGCTGGATGCCTTCCACGGAAACATTTAAAAGCAAATCTTGCCAGCTTTCAAACCACAATGGAGAAGCCAGCAACTCCCTGTCCTTTCTTTTCCTGCTCCTTTCCTTCACTCACGAGGACTTTCAATTTTTATTATAAGGAGGACCCAAAATGTGCGTGCACATGTGTGTGCTCAGATGGTACACATCCACATGCCTACATGATAAATTCACATGCAGTTCAGTTCCAAGCAACCAGCACTAGGGCTTGAGGCTGGCAGATATGCTGCTTGTAGGCAGGAAAACCAGAGGAGTCACCGCCAATCTGAGGGGTTTTAGACTGAAGAAAAGATTTCTCCTCTCAAGTGCCAAGGAGCAACTATACATGTCTGCTCAACTTTAGAAGGAAAAGAAGGCCTAGCAAACTCACCGTCTGGGGCATTTATGTGTTAATAGGAGCTTCCCTGGTAGCTCAGCTGGTAAAGAATCCACCTGCAATGCCGGAGACCCTGAATCGATTTCTGGGTTGGGAAGATTCTTGGAGAAGGGAATGGCTACCCACTCCATTATTCCTGCCTGGAGAATTCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATGGAGTTGCAAAGAGTCGGACAAGACTGAGCGACTTTCACTTTCACTGTGTTAATAGATAGTCCTTCTGTATACCTAGAAGGATCTGTGAGTCTGAGATCCTTGGAAATAAATTAATTAACAAACCATGCCCTCAAGGCAGGTCTGATGAAAAGAAAAACTATCAGTGGGGTAGATGCAATAAGCCCACAGGTTTTTACACTGGAAACTTTGATTGTTCTAAGTAACAAGGACGTGTCTGTCTGGATACCAGTAAAGAATGGACTCTGCCTTGGCCCTTGCCACCCTGGCTACCTCTCAGAGATAGGGGGAGCCTGATGTTTCTCTCAGCATGCCAAGCTGTTGACCCCAATTCTTTGGTGCCTCCTGAGTTGAAAGAAATGTCTTATGAAACAGGTCTCACTCATTTGTATAAGGTGCTGACTGGCTGGCGAGGCTAGCGCCTAGTCTTGGGTGGCTGGGAAATTTCCCCTCCTTAGGGAAATGTGAAGACTTCTTGTAGAATGACAGGTGCCTGTAAGTTCAGTCCATTTGCACATAATCGAGGAGTCTTCCTGCACTTGGAGCTGAAGTCCTATGTTTGAAGTCAAGCCTTTAAACTTTCCAGCCACTATATTCTTGCAAGTTGCTCTCACCTTGTATGTGGAAATGGACTCTTAGGAATGAAGACTTCTGCTATTTACCAAGTATGGGGTTCAGAGATGCCTTTTGGACTGCCCTGTGATGGTGCATAGTTAGGATGGAGCTTCTCTCTCAGCTTCTCTGAGCAGCTACCTGGGTGATCTTTAGAGACTCCAGTGGAGGGGAAAGGGCAAGAAGAGTCTGTCCCTTGGAGCCCCCATTGGGAAGATTGACAAGTAGCTCAGCCCCAGTACAGCTGATACTGTTTGAAGAGGGTTAGATGGATGGTTGGAACAGGGTGCTGGCTGTGGAGGTCAACCAAGCAGGGCCAGAAGCTCCTAACAGCAGGAGTCTGAGCCTTGTTGGGGTAGAACTCTCCATCTCTCCTCTACCTCCTCTCTGAAGATTTGGAGAGCTGGGCAGTTGAGGAAAGAAGAGCCACTGATCTGTGCCTGCAAGGAAAGTGGACCTTTGCAGCAGAGTTCTTCCTGCCCGGGGCACCCTTGCCCCCATCTGCCACTGTGGCTTCCAAGAAAGACCTCTTTAGATGGCTTACAGCTGTGGTTTCATTGTTGACTTTCAAGAAGATGGTATGCTGCCACCTGTCATTTTGCTAGGGGTCTCTTAGCAAGCTTACTGCCTCTGTGGGGATATCCACCAGCCTTGTGCAGGGTGGACTGGAATTCAGGAGGGCCTTAGCCTCCTCAGTGGGCTTCTGCAAAATGCACAGAAAATAATAGGGGCCCAGGGAGAGGCTTCCTCTGTTATAGATGGGAAAGAACAGTTTTGTGAATGTAAACATACTTCCTGAATTTTGCATTTGAGAAATGACTTGGAAAACTTTTTTTCTGGTTATTTTTATTTTGAACGTTCAAAGCCTTTGTTGGCCCCAATAATCTTCTTTGAATGGCTTGGGAAAAATTTTTCCACAACGTAAATTACTAATGACTAACTTTTATTGGACAGCTGTTTTGGTTTATCAAAGTTCTCTTTAATTTGCACTAACATTATGATAGTGTTAAACATGGAAATGTTGCCAAATGTCAGTTTGCCAGGTCACTTTCTGAGAAAGTGATTCTGGGGTAGGCTTGATTTTTTTTAAAGATTGGGGATTGGGTGGAATTAAGGGAAATCTCTTACATGATAACATTCCACTTAATGCAGACCCCACTTTTCCATTTTGGCTCGCCCTGTTTAGAAATCATTTCTCATGTACTAATAACCCAGTCAGGAATTTTGGAAAGATTCTTTGAAACAGAGGCACTGCTGTGATGCAGAGCTGTATTTTCTCACTGGTAGCACATGGCCTTGCAGCTTTGAACTCCTGGGCAGATTTGTGTGCATTTATGTAAGTGTGTGCAATGAACCTGAAACCGTGTGATGAACAAAAGGCCAATTTATAGGTTTTTTTCCCTCACTTGTGAAAAGCGACATAGCCTCATCCGACTTAATCTGTTTCCTGGAGCTTATGTTATAAGGTGATCAAATGAAGGAAAAACTTGAGTTTATCTGATTGGTAATAAGGGGATCCAGTCCCCCAGGTGATGTTGGAATTAAGCACAAGGTAACATTCTTAGTAATCACATTAGTGAGAATGTGAGGAGTTAAATTGGAGGGGGAGGGGGAGGGGTTACCTTCAGGAAGAACTGAAAAGCACAAAATAGGCTTGACTGTGCAAACTGGTGAGGAATGCATACTGACCTCCGGGCTTTTGGATTTTAACTCTGAGTTGAGGCTGAGGTGGGAGAATCTGAGATTAACCATCCCTGTGACAAATGCTGAGCCCTGAGGTTGAGGTTTTGGCCTGAGACTTCAAGGAATAATATAATTCACCTTTCTCTCCTTTCTACCAGAAACAAAACAAGACACTGTCCTAGAGACCTCCAGATAATGATATTTTGTCATCTATGTAGATAAGACTTTAGGACATAAAGACCAAAAAATAAAAAAGTCACTCAAAACACAAACCTTGTTCTCTGATGCAAAAATGTCTTGGCCAGAATTCTTTGGAGTTTGGGCAGTTATTTCAGGGTTAGGAGATTGGAAGGAGAGATGGATACAGAAGGGGAAGAAGCTCTCAAAGAAAAGAGATGCTCTCTTTAAAAAACAAAACTGTTTCAAAGCTCTGTAGGACAGAGAACACGGTGCCATAGGTACATCTCCAAGAGAAATTTCTGTATGAACAAAGGAATTCCACAGGTGGCCCTACTAGTAATGAACCTGCCTGCCGGTGCAGGAGATCTCAGAGACACGGATTCAATCCCTAGGTCAGGAAGATCCCCTGGAGAAAGGCATGGCAACCCACTCCAATATTGTTGCCTGGAGAATCATGGACAGAGCAGCCTGGCAGGCTATGGTTCATAAGGGTCGCACAGAGTCGGATAGGACTGAAGCAACTTAACACACCAGCATAGCACCCAAACCAAGATGTGAAGGTCTAGGTAGGAGGCAGAGATCTCCTTGAGCACCGATGCAGCAGTACAGATTCTCTAGTCAAGTCTCTACTTAAATTGTTTTACACAAAGTCTTCTTGTTGGAGGCAGATGAGATGAGAAATGATCTAGAGAGGTAAAAATAGACAAATGTGGCACCCTTTCTTTCTGAGGGAATTGACAGCATTTACCCTGTCACGGGAGGTTACGGCTCCCCCGGTGTTGTAGCCAAGCACTAGACATGGACAAGCTGTAAAGGGAGAAGCTCAGTTTACCTGTGGAGCCTCCCCAGCAGATTGCAGACCTGTTTTCCAAGCTGCTGGTTTCTGGTGTATAACTGCTAGTGTTTCTTAAGGGTTTCCCCATTTGATTTAGCTTTGTGAAGTATCTTTTATCTTAATCATAACTTGCTTTTCAAACAATGGTACATGACCTGGTTCAATGTTTGGTTCTGAATTTATAAACTGATGTGTTTAGATATCTTAATGTAACTTGACAAGTCCTCAGTAGGGAGCTGTGAATTTCTGTAACATTTTGATATGTTTTAAAGCACCTGACCTAGATCTTGTTGAATAAAGCACTCTCAAAAAGAATT EMBV3_41075 GGATCCCTTCTGGACAAAATGAAGGGCTACATGAAGGAGGCCACCACAACTGCCAAGGAT Gene GeneID:614237|LOC614237:XR_083856:176_cdna Constitutive 0 NULL GeneID:614237 15 PSEUDO LOC614237 NULL similar to apolipoprotein C-III EMBV3_26216 GGACAGTGAACAGAAATAGAGTCACTGGCTGTGGGCACATGGCACCTCTGGATGAAGCTT Gene BVT0102_242761 + 0 NULL GK000010.2:85072780-85091797 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015104 TCONS_00015114 TCONS_00015107 TCONS_00015113 TCONS_00015108 TCONS_00015111 TCONS_00015106 TCONS_00015112 TCONS_00015109 TCONS_00015116 TCONS_00015105 1 XLOC_008417 Coding TCONS_00015106 XLOC_008417 Coding Coding PSEN1 10:85006155-85075849 j TSS10732 5218 1 TCONS_00015106_5 464 12 0.925300962793968 0.0038711441783106 0.00192557780638285 0.00129283048867429 0.00251332913807391 0.00286052651904487 0.00155961312737505 0.000676451697128401 0.00148869326170819 0.00159961568293204 1.07260573322282e-06 1.04523894328835e-09 1.23246902933105e-07 0.000685153179940946 1.15603057090141e-07 0.000979917486186236 0.00122475980346635 2.75578453102751e-10 7.87113069719703e-06 0.000959434693826749 0.00251445735566547 0.000294479903030758 0.000477348940008526 0.000748345682585121 1.18149702551093e-07 2.79866655979296e-06 0.00173951945486106 0.00253516642202729 5.28242140855843e-09 2.76709763892474e-08 3.64157926263475e-07 XM_005211937.1 PSEN1 PREDICTED: Bos taurus presenilin 1 (PSEN1), transcript variant X7, 0.0 5036 100.00 0.534879264085857 XM_005267866.1 PSEN1 PREDICTED: Homo sapiens presenilin 1 (PSEN1), transcript variant 0.0 3205 83.73 0.577807589114603 TCONS_00015106_5 sp|Q9XT97|PSN1_BOVIN PSN1_BOVIN Presenilin-1; 0.0 851 96.86 0.997844827586207 1 noncoding 0 0 0 0 -0.0198386869709561 0.845498473305925 0.105061323167698 0.107937323080954 GTCACCAACGACGCCCGGGCCGGAAGTGACGGCACCGGTGAAGCCTTTTGGGTGGGACCTGGGTCATCAGCTCCAAAGGCCGCGATTTCACATCGGAAACAAAATAGCGGATGCTCGGGAAGGAACCTCGGCTGCTAGAGGCCGGTGGTGGTGGCGGTGAGGAAAGGACCTAATCCAGGAGCCAGCAAGTGACAGCAGCCTGTGAGGTCCTTAGAAAGCGTGGCCTGGAGGAAAACACATGAAAGAAAGAATCCCAAGAGGCTCTGTTTTCTGTGGAAAAGTATATCTATACAGTTGCTCCAATGACAGAGTTACCTGCACCCTTGTCCTACTTCCAGAATGCACAGATGTCCGAGGACAACCACCTGAGCAATACTAATGACAGTAGAGAGCGGCATGAGCACGGCAACGAGAGGCGGAGGCGTGGCAACACTGAGTCGGTGTCCAATGGCCGAGCCCCCAGCAGCTCACAGCAGGTGGTGGAGCAAGAGGAAGAGGAAGATGAGGAGCTGACATTGAAATATGGCGCCAAACATGTGATCATGCTGTTTGTCCCTGTGACTCTCTGTATGGTGGTAGTTGTGGCCACCATCAAATCAGTCAGCTTTTATACCCGGAAGGATGGGCAGCTAATCTATACTCCATTTACAGAAGACACGGAGACTGTGGCGCAGAGAGCCCTGCACTCAATTCTGAATGCGGTGATCATGATCAGTGTCATTGTCATCATGACGATTCTCCTGGTGGTTCTATATAAATACAGGTGCTACAAGGTCATCCATGCCTGGCTTATTGTTTCATCCCTGTTGTTGCTGTTCTTTTTCTCATTCATTTACTTGGGGGAAGTGTTTAAAACCTATAATGTTGCCATGGACTACATTTCGGTTGCGCTCCTGATCTGGAATTTTGGTGTGGTGGGAATGATCGCCATTCATTGGAAAGGTCCACTGAGACTCCAGCAGGCATATCTCATTATGATCAGTGCCCTCATGGCCCTGGTATTTATCAAGTACCTCCCAGAATGGACCGCCTGGCTCATCTTGGCTGTGATTTCAGTATATGATTTAGTGGCTGTTTTGTGTCCAAAAGGCCCACTTCGTATGCTGGTTGAAACAGCTCAGGAGAGAAATGAAACTCTCTTCCCAGCTCTTATTTACTCTTCAACAATGGTGTGGTTGGTGAATATGGCAGAAGGAGACCCAGAAGCCCAAAGGAAGGTATCCAAAAACTCCAATTACAATGCACAAAGCACAGAAAGTGAGTCACAAGACCCAGTGACAGAGAGTGACGATGGTGGCTTCAGCGAAGAGTGGGAAGCCCAGAGGGACAGTCGCCTGGGGCCTCATCACTCTACAGCTGAGTCGCGATCTGCCGTTCAGGACCTTTCCAGCAGCATCCTGGCCAGTGAGGACCCAGAGGAAAGGGGAGTAAAGCTTGGATTAGGAGATTTCATTTTCTACAGTGTTCTGGTTGGTAAAGCTTCTGCAACAGCCAGTGGAGACTGGAACACAACCATTGCCTGTTTTGTAGCCATATTAATTGGTTTGTGCCTTACATTATTGCTCCTCGCCATTTTCAAGAAAGCATTACCAGCTCTTCCAGTCTCTATCACCTTTGGGCTTATTTTCTACTTTGCCACAGATTATCTTGTTCAGCCCTTTATGGACCAGTTAGCATTCCATCAGTTTTATATCTAGCATATTTACAGTTAGAATCTCATGGATTTTTCTCCTTTGACTATAATAAAATCTGGGGCGGACAAAGGTGATTTTCCGGTGTCCACATCTAACAAAGTCAAGATTCCCAGCTGGACTTTTTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTGCACTATTGGGCGTTGGAAGGAGGCTTCTACAGAAAACGGTTTTGAACACGTCATTGTGGTGAACTGAGTCCCTCAATGCAGAAACTACCAGATCTGAGGGACAAGGACAAGGCAAAGCCATGGGCCAAAAAGTTGCTGTGCTCCCACCAGCAGGTTGACCTGTGGTCACAGGTGGACTTTACCAACGCTGCAGACTCTCAGGACTACCATTACCAGGAGGTTAAGTGAAATGGTTTAAACCAAACAGGACTCTTCATCTTAAGCTACATATTGAAAATCAACCTAATAAATCTGTATTGAATTCTGAACCTTTTTGGGAGATACCATAAGGAGAGCAGGCACCAGCAGCAAAATGGAATGATGGGAAGGGACTCAAACTTTCAGACTTTTTGCTGCAGACTTACTATTTTTAAATAAGACTTTTTTTCACCTGAGTCAAGTCAGAGGTATAGGTTGATTTTGACACTTCTTCTCAAGCACTGAAGCTCATTACTATCTGTGGCTGCCATTTCTTCCCAAGGCCAGTCTGAACTTATTTGAGGTGGCTTTATCTTAAAAGTCTTAACCTCAGGTTCAAATTCAGTAATTTCTGGAAATAATGGGACTATAACTCAACATTTCCTATCACCCTTAGGTAAATTCTGGATTCTCCAACAAATTCCTAATTTGTAGGCATATTGGGAGGTTCACTTGCCTCCAGGTGCCTCCCTCCTTCCCTCTCTCTCCCTTTACTCCCCTCACGAGCACTTGTCCTGTGTGGTGAATAAGAGCCCTGTTGTGGTAGCAGATGGTCCAGTTGTCATAGGATTTTGCTCTTTGTGTGGCACAAAGAATCTGTCATGAATCAGTGCTCTCAGCCCTGCTGTCATAATTTCTTCAATAGCAAAATGCAATGTGTGCCCAAAGACAGTAGAATTAAAGAAGAGTAAAATTGCTCGTGAAGCACTTTTCTGTCCTGATTTTTTCCTTTCTTTCTTTTTTTTTAAACTACAACCCATTGTCTCTTGACAGTAGGTCGGAATTTGAGCCAATAGCCAAAAGCCAGTGGTTTATAAAGTTTACGACTCAGTTGTATCTGTACAAAGCTTGGAGAACACCGTTATTTCCCTTGGTGAGCTGAGGGAGAACCGAGAGTCTGGAGGAGAACCAGCCGCCAAGAGGAGAGAGGAGAGGCCCCCAGCAGCCAGTGGGACAAGAGGAGGCCACGTCCTGTGAAGGAGAGGATCCGAGTGATTCCTCAAGCAACTCACAACAAGTGTTCTGCAGTTTCCCTACCTTTCATTTCAATGTACCTCTGCAGGAGCTGGGCCGCCAAGTTCAGCCCCTGAACAGTTCAGTTGGACAGTGAACAGAAATAGAGTCACTGGCTGTGGGCACATGGCACCTCTGGATGAAGCTTTGCCAGGCACACCCCTTCTCTTACCACAGCCAACCTCAGCCATGGTGACCACAACCCTTCTCCTACCACAGCCAGCCCTCAGCCATGGTGGCCACACCCCTTCTACCACAGCCAGCCTTCAGCCATGGTGGCCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGGCCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGGCCACACCCCTTCTCCAACACAGCCAGCCCTCAGCCATGGTGACCACACACCTTCTACCACGGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACCCAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACCACAGCCAGCCCTCAACCATGGTGACCACACCCCTTCTCCAACACAGCCCGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGGCCACACCCCTTCTACCACTGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACACAGCCAGCCCTCAGCCATGGTGGCCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACACAGCCCGCCCTCAGCCATGGTGGCCACACCCCTTCTCCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACCCAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACCACAGCCAGCCCTCAACCATGGTGACCACACCCCTTCTCCAACACAGCCCGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGGCCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCTACCACAGCCAGCCTTCAGCCATAGTGACCCCACCCCTTCTCCTACCACAGCCAGCCCTCAGCCATAGTGACCACACCCCTTCTCCTACCACAGCCAGCCCTCAGCCATAGTGACCACACCCCTTCTCATACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTACCACAGCCAGCCCTCAGCCATGGTGACTACACCCCTTCTACCACAGCCAGCCCTAAGCCATAGTAACCACACCCCTTCTCCTACCACAGCCAGCCTTCAGCCATAGTGACCACACCCCCTCTCCTACCACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCTACCACAGCCAGCCTTCAGCCATGGTGACCACACCCCTTCTCCAACACAGCCAGCCCTCAGCCATGGTGACCACACCCCTTCTCCAACCACAGCCAGCCCTCAGCCATGGTGACCACACCCC EMBV3_14884 CTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCGTGCGGCTTAATTTGACTCA Gene GeneID:100337018|LOC100337018:XM_002685423:15_cdna Constitutive 1 NULL GeneID:100337018 2 GENE LOC100337018 NULL hypothetical protein LOC100337018 EMBV3_22808 GACAACATCATGAGCTGGCAGCCTCCAGAGATGGGGAAGAAGATAGAGGCCACCACCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24807 CAAACGTGGCGTGTTGTTCACATACTTGCTTAGCTTGTCCCGTAAAGTCCATTTGGTTCC Gene BVT0102_079029 + 0 NULL GK000008.2:85678840-85692415 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228543 1 XLOC_138515 Coding TCONS_00228543 XLOC_138515 Coding Coding BICD2 8:85688470-85743419 = TSS170358 4605 1 TCONS_00228543_6 805 8 0.916339084225086 0.000756113995186632 0.000607041262991534 0.00065869000827762 0.000457229222891024 0.00052707097038166 0.000510727794178742 0.000749986320659633 0.00109168974294221 0.000631397488880144 0.00184459408308849 0.000429870681001799 0.00034355688755358 0.000147171631424898 0.000725334736248878 0.000203611774748874 0.00552538254312075 0.00108365059575015 0.00193691862878985 0.00060658387705256 0.000846499674794574 0.000150029670243471 0.00119023930419299 0.000820753779310176 0.00187358737108354 0.000646206793647208 0.000366013266414645 0.000502356002278488 0.000639916399897939 0.000832167088892488 0.000823859712250817 NM_001206475.1 BICD2 Bos taurus bicaudal D homolog 2 (Drosophila) (BICD2), mRNA. 0.0 8305 100.00 0.999782844733985 NM_015250.3 BICD2 Homo sapiens bicaudal D homolog 2 (Drosophila) (BICD2), transcript 0.0 5304 85.69 0.986319218241042 TCONS_00228543_6 sp|Q8TD16|BICD2_HUMAN BICD2_HUMAN Protein bicaudal D homolog 2; 0.0 1434 90.66 0.998757763975155 1 coding 0 0 0 0 -0.221392260980303 0.123612468211656 -0.0161863105658275 0.795240704259625 TGCCGTCGGGCGGGGCGGCGCGGACAGGAGTCTGGTCTGAGCCTCCGACGGAGCGAGTGGTGCGACTCGGGCCGTGGCCACCATGTCCGCGCCGTCCGAGGAAGAAGAGTACGCGCGGCTCGTGATGGAGGCGCAGCCAGAGTGGCTGCGCGCGGAGGTGAAGCGGCTGTCGCACGAGCTGGCCGAGACCACGCGTGAGAAGATCCAGGCGGCCGAGTACGGGCTGGCAGTCCTCGAGGAGAAGCACCAACTCAAACTGCAGTTCGAAGAGCTTGAGGTGGACTACGAGGCCATCCGCGGCGAGATGGAGCAGCTCAAGGAGGCATTTGGACAGGCCCACACGAACCATAAGAAGGTGGCTGCAGATGGCGAGAGCCGAGAGGAGAGTCTGATCCAGGAGTCAGCTTCCAAGGAGCAGTACTATGTACGCAAGGTGCTAGAGCTGCAGACAGAGCTGAAGCAGCTGCGCAACGTGCTTGCCAACACGCAGTCGGAGAATGAGCGTCTGGCCTCAGTGGCTCAGGAGCTGAAGGAGATCAATCAGAATGTAGAGATTCAACGTGGCCGCCTGCGGGATGACATCAAGGAGTACAAGTTCCGGGAGGCACGCCTGCTGCAGGACTACTCGGAGTTGGAGGAGGAAAATATCAGCCTGCAGAAGCAGGTGTCTGTGCTGAGGCAGAATCAGGTGGAGTTTGAGGGCCTCAAACATGAGATCAAGCGTTTGGAGGAGGAAACTGAATACCTCAACAGCCAGCTGGAGGACGCCATTCGGCTCAAGGAGATCTCGGAGCGGCAGCTGGAGGAGGCTCTGGAGACGCTGAAGACAGAGCGGGAGCAGAAGAACAGCCTGCGCAAGGAGCTGTCGCACTACATGAGCATCAATGACTCCCTCTATACCAGCCACCTGCACGTCTCCTTGGACGGCCTCAAGCTTGGTGATGACGCCGAGGCCCTGGCCAATGGCTTCGAGCACGGTGGCCTGGGCAAGGTGCCACTGGACAACAAGACCTCCACGCCCACCAAGGACGGTCTCACCCCACCCCCTCCCAGCCTCGTTTCTGACCTGCTCAGTGAGCTCAACATTTCTGAGATCCAGAAGCTTAAGCAGCAGCTAATGCAGGTGGAACGGGAGAAGGTGGGCTTGCTGGCAACACTGCAGGACACACAGAAGCAGCTGGAGCAGGCACGAGGGGCCCTGTCTGAGCAGCACGCGGAGGTGAGCCGCCTCACGGAGAACCTGAGTGCTCTGCGGCGCCTGCAGGCCAGCAAGGAGCGGCGGACCGCGCTGGACAGCGAGAAGGAGCGGGATAGCCACGAAGACGGTGACTACTACGAGGTGGACATCAACGGGCCCGAGATCTTGGCCTGCAAGTACCGTGTGGCCGTGGCAGAGGCGGGCGACCTCCGGGAGCAGCTGAAGGCCCTGCGCAGTGCACATGAGGCCAGCGAGGCCCAGCACGCCGAGGAGAAGGGCCGGCACGAGGCCGAGAGCCAGGCGCTCACTGAGAAGGTCTCCCTGTTGGAGAAAGCCAGCTGCCAGGACCGTGAGCTCCTGGCACGGCTGCAGACAGAGCTGAAGAAGGTGAGCGATGTTGCCGGCGAGACACAAGGCAGCTTGAGCGTGGCCCAGGATGAGCTGGTGACCTTCAGCGAGGAACTGGCCAATCTCTACCACCACGTGTGCATGTGCAACAATGAGACACCCACGCGTGTGGTGCTAGACTACTACCGTGAGGGCCAGGCTGGCACTGGCAGCTGCAGCCCGGAGACCCGTGAGCGCCGCTCACCTGTCCTGCCCAAGGGCCCACCACCCGCAGAGGGTAGGGCCAGGGACAGCAGCCCCTCGCCTGGCTCCTCTCTGCCCTCACCCCTGAGTGATCCACGCCGAGAGCCCATGAACATCTACAATCTGATTGCCATCATCCGTGATCAGATCAGGCACCTGCAGGCAGCCGTGGACCGCACCACGGAGCTGTCCCGGCAGCGCCTAGCCTCACAGGAGCTGGGCCCAGCTGCAGACAAGGACCGGGAGGCACTCATGGAGGAGATCCTGAAGCTGAAGTCACTGCTCAGCACCAAGCGGGAGCAGATCACCACACTGCGCATGGTGCTCAAGGCCAATAAGCAGACGGCAGAGGTGGCCCTTGCCAACCTAAAGAGCAAGTATGAGAACGAGAAGGCAATGGTGACTGAGACCATGATGAAGCTGCGCAATGAGCTCAAGACCCTCAAGGAGGACGCGGCCACCTTCTCCTCCCTGCGGGCTATGTTTGCCACCAGATGTGACGAGTACATCACACAGTTGGATGAGATGCAACGGCAGCTGGCAGCTGCCGAGGACGAGAAGAAGACGCTCAACTCACTGCTGCGCATGGCCATCCAGCAGAAGCTGGCACTGACCCAGCGGCTGGAGCTGCTCGAGCTGGACCACGAGCAGACCCGGAGGGGCCGCGCCAAGGCCACCTCCAAGGCCAAGCCTGGCCCCCCGAGTCTGTAGAGTAGCTGCTGGGAGGACTCGGCCGCCGGCCCTGTCACACTGCACCCCCCTCCCTTCCTCTCCCATGGTCCACGCAGAGGAAGGAAGGGCAGCCTAAAAGTCCACTTAGAAACGTTTTTGGATATGCCACTGCAATTCTTTTCAAAATAGCATTCCCCAAGTTTTTAATGGCAGAGGAAATAAAAGCTTTAATGTTGAGAATACCGCCAGCTGCTGCTTGGAAAGGCCTTTGTACAGGCGCTGAAGAACCTGCTTGGACAGCGACCACCAGGCTTGCTTAGGAACCCTCTAGAAACACTCACCACTGGGGTCTCCCTATTACAGATACTCCTTTTTTACCCAATCAATCTGTGCACTTTTGATATTTTGATATTATATTTGCTTCCTTAATCCCTGGCATAGAGATGGTCTCAGATGCCGTAGTCTGTCTCGTGGTCCTGTAGCTCCCACAGTGTGTTGGTCTGATATCAGCACATGGCACAGACGTGTCCTCCTAGCGCGTAGCTCTAGACTGTTTAGGTGAAGGCTTCAACCCGGTAAGGAGCCCGGCTGAATGTATCCACACTGTGGTTCAGCAGCCTTTTAGATTATACGGCATTGTGGTTCATGTTGGAAATTACAGATTTTAAATGCCATGTTCATTAAGAAATCCAGGGTATTCCGATTCTGGGGTTTTTCATATTGTATTATTATTATTCTTAGGAATAGTTCAGTGTAACAAGAAGAAAACTTGACCTTTGCTCTGGTTAAACAGTAAAAGGCACTTGAAAACAAAAAGATAAATTATTGAATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACATTGTGAAGCATGACTGATTAACAGAATTTTATACAACTGTACCAGTGAAATTCCAAATTGGAATTGTTTTGTTACTCTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATCCTACAGTCTTCGATTTTTAGGGTGTTCTATTTCAACGCCTTTTTGTTAGTAATCATTGCCAGTAGTGCCTTCATCAGTTGAGGGAGGTGGCCCAGCGTAGTCTATTCTCTAAAACAGACAGTAAAGAGCTATTTGGAAATGTTGAAGGCTGGTATGGACCAGTTGGTGTGAATAGGCACACACCTTTGAACCTAAATCTGGGCATCTTCATTGAGGGAAAGAAAACAGCAATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTGTGCAGATCCTTGCAAATTCAGGGGCTGAAAAAATGAAAGTGAATATAAACCTTGAGTGTGCTTTGGGAACCAAATGGACTTTACGGGACAAGCTAAGCAAGTATGTGAACAACACGCCACGTTTGTGAAGAGTGGGGTGGGTGGCAGGGGAGCTGGCACTGTCGGCCCCGTGCACTGGGGTGAGGGGTAGCCATAGTATTCTTTGCAAATGTGAGAAGAGACATTATATATTCTCTTGCTTGGTGTAACTAATCACTGTTAATTTCAGGAAACAGAAGTCACTGAAGCTCCTTAGCAAACCAGATCTTTGTCCTGTCCTGATTTGCTAAGTGAGGTTGTGCAAATGGTCAAATTGGTACTCGAGGAGGAGGAATGAGAAAAAGTGTCCTCTCTTCTCCAAAATACAGGACAAATTATAATAATATAAGTAGCAAGAAAGAAAGAATTCTGTTTCCTGGAATAAGCATTTTTATTCCTAGTTGTAGGGACCCCTGTTTTTACCTTCTCTTACAGTGTTGATTCATAAGAAATAATGTTACATTTACAAAAACTTCATCTGTATGGGGTATTTATTTGCAATGATGTCTGAGTACTGTATTTTTCTGTGCATTACCTTAGTGTCAGAATGTTGTCTTTATTTTAAGATCATATGCATGTTCTCCTGCCAAGGATCTTTTACACAGACCCAAACAAACAAAAATGCCTTCAGATTTTGAGAAAATGAGGCACTACATGGAAAAGGAATAGGAAGGGGAAATCAGTCACCAGCTGGGACACAGACATATGACACAAGTGTCTGTAAAGCCAGTGCATATAGGAACAGTGGGCCTGGGTAAGGGGTCATTTTGGTAGGACCAATAAATAAAAAATAATAAAAAGACAAAGC EMBV3_22866 ACAACGGATCACTCAGCAACGTTCAGGATCTGCTCATTTCACCGACTCCAAGAGCAAGTC Gene GeneID:512304|ENPP5:XM_002697264:10_cdna Constitutive 0 NULL GeneID:512304 23 GENE ENPP5 NULL ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative function) EMBV3_37591 GAGGTACAGTTGATTTACAATGTTGTGTTAGTTTCATGTGTACAGCAAAGTGGTTCAGCT Gene BVV0102_100498 + 0 NULL GK000030.2:129542247-130065139 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135966 TCONS_00008586 2 XLOC_082186 XLOC_004143 NonCoding TCONS_00008586 XLOC_004143 NonCoding NonCoding - 1:73915128-73915544 - TSS5663 416 0.4375 1 0 3.27058826092119e-05 0 0 7.98476175133334e-05 0.00244486084945138 8.59872387555575e-06 0 0.000156398964399282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.10264999892416e-05 0 0 0 0 0 0 0 XM_005225612.1 GSTO2 PREDICTED: Bos taurus glutathione S-transferase omega 2 (GSTO2), 7e-17 91.5 77.78 0.274038461538462 0 noncoding GTGTGGTGTGGGCTGGGCGTGTGCTCTGTTGCTCTGTGGGTGGAGGGTGGTATGGTGGCCGTCACACGGATGTATTCCCTATGTGAATTTGGATAAGTGACTTATCCCAGGCTGTTTTCTTCCTTCTTTCCTTTTTTCCTCTCTCTCTCTCCCCCTCTTTCTTTCTTTTTAGTGAGGTATAGTTAATTTACAATGTTGTGTTAGTTTCAAGTGTACAGCAAAGTGATTCAGTTACACACACACACAGATGTAGATTCTTTTCATTTATAGGTTATTATGAGATATTGAGGCTGTTTTCTTAATCTGCAAAATGGAGATAATACATGCTTTGCCCATTGGTCAGGGGTTCCAGTAAAAGAATGGATATAAAGATATTTTGAAAACTGTAAAGTGTGTGTATGGATAAAGTACTTTAT TCONS_00004005 . 3' 246 TCONS_00004005 . 3' 661 EMBV3_31090 CACATTCCGGGACCAACATACAGTGGGTACATCAAGTCCCTTGGACAGAAAGGGGCAGAA Gene GeneID:539175|DUSP1:NM_001046452:145_cdna Constitutive 0 NULL GeneID:539175 20 GENE DUSP1 MGC128230 MKP-1 dual specificity phosphatase 1 EMBV3_31172 AGCGTGCTCAAGATGAGGTTCCCACAAGGCGGTCTGGCAGAATGCGTCTTTGATAAGTTT Gene GeneID:520727|LOC520727:XM_002700248:23_cdna Constitutive 0 NULL GeneID:520727 X GENE LOC520727 NULL similar to Fth1 protein EMBV3_12138 TCGTGTAGGACTCTGCAATCTTTTGATCAGTTTCTGAGAAAATGCAGTGAAGCGTTTCAC Gene GeneID:616809|GOLGA7:NM_001035484:109_cdna Constitutive 1 NULL GeneID:616809 27 GENE GOLGA7 NULL golgi autoantigen, golgin subfamily a, 7 EMBV3_32286 GCTACATGGCTGTATGGCTAAAAGATCAACATTTGAGGGATTCATGGCAAGAAGCTGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06079 TGCTCCAGTTCTAAAGTCAGTCTTTTAATCTTGTGCCCTCTATCTGACTTGTGAACGTTC Gene GeneID:511147|CDK13:XM_002686897:83_cdna UTR3_Alt 2 NULL GeneID:511147 4 GENE CDK13 CDC2L5 cyclin-dependent kinase 13 EMBV3_43354 CTTCATGTTTCTTGGTGTTTCAGGTTCTTCAGGAAACTCTATTAATATCTGTGCTTTATG Gene BVV0102_199708 - 1 EMBV3_31537 GK000030.2:111704837-111752107 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43330 GAGGGGTGCAGGGAGCCGAGGAGTGATTTCAAGGTTATGACAGTAAAAAAGAGTTAAGTG Gene BVT0102_230619 + 0 NULL GK000024.2:35173407-35360072 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25344 AAAGAGCCCATCATCGAGCTCTTCGTCAAGGAAGCCTGCAGACCTGCAGAACTTGGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34704 CTATGAGATCAGGCAGTTCCTGGACTGCTCCACCACCCAGAGCGACCTGACCCTGTGTGA Gene GeneID:615846|CHCHD10:NM_001083774:106_cdna Constitutive 0 NULL GeneID:615846 17 GENE CHCHD10 C17H22ORF16 MGC140249 coiled-coil-helix-coiled-coil-helix domain containing 10 EMBV3_03562 GATGGATTACTCCAGTATCTGCCTCTGTCTTCACATGGCCTTCCTCTCTGTCTTCCTTCT Gene GeneID:539837|ALG10:NM_001076189:23_cdna UTR3_Alt 2 NULL GeneID:539837 5 GENE ALG10 ALG10B MGC139886 asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe) EMBV3_22627 AGAGGTTCAGGAACAGGCTGACCTAGTTGGCCGTTAGGATCCTGTGGTCCCTGACAGATT Gene GeneID:533177|SCARB2:NM_001102153:86_cdna Constitutive 2 NULL GeneID:533177 6 GENE SCARB2 MGC140207 scavenger receptor class B, member 2 EMBV3_38524 TGTCAGCCAGCCCTGCTGCCGACCCACGAGCTACGAGGCCGTTTCGTTCATGGACGTCAA Gene GeneID:530812|LOC530812:XM_002686516:690_cdna Constitutive 0 NULL GeneID:530812 3 GENE LOC530812 NULL similar to neurotrophic factor artemin EMBV3_24823 CTTAAGCTAGATGTGCCTAGCAGCTTTATCTGTTCATCTCCTTCAGAGGATGCTATGGGG Gene BVT0102_034399 + 0 NULL GK000008.2:27993366-28204591 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224766 TCONS_00224772 TCONS_00224770 TCONS_00224779 TCONS_00224771 1 XLOC_137632 Coding TCONS_00224779 XLOC_137632 Coding Coding BNC2 8:27664244-27997356 j TSS168484 7184 1 TCONS_00224779_3 829 0.0150334075723831 7 0.978454629237702 3.45440468442056e-11 0.000943519609186452 0 4.06110712751841e-08 0.000309099076566302 0.00040477450060429 1.624728871203e-20 0.00110520297370997 5.42354030941774e-23 0.000699407403939143 0.0002348523970411 4.51677066775805e-09 2.76704304058774e-30 0.000567424342593276 1.74888364100768e-07 1.95387596705714e-39 8.29307139012613e-65 1.07310701054944e-05 0.000483592884816637 0.00316685166049885 0.000318782472079511 4.90791972291631e-15 7.51650958431553e-05 1.09285129823074e-53 0.000509267015880185 0.00194025723071946 0.00059476863858839 0.000112551088124757 7.3108673444819e-10 8.85759930021934e-05 XM_001789538.4 BNC2 PREDICTED: Bos taurus basonuclin 2 (BNC2), transcript variant X1, 0.0 4828 100.00 0.372494432071269 NM_017637.5 BNC2 Homo sapiens basonuclin 2 (BNC2), mRNA. 0.0 4596 86.05 0.541481069042316 TCONS_00224779_3 sp|Q6ZN30|BNC2_HUMAN BNC2_HUMAN Zinc finger protein basonuclin-2; 0.0 1602 98.55 0.993968636911942 3 coding 0 0 0 0 0.046729534034744 0.812051000781682 0.0612135469483087 0.285883575291528 AGCCATAATTACAAGTCAGAGGACAGGCTTAGCGAGCGAGGTGGGCAAGCCTGTTTCAGGGTTCCCTATTGTAGGGTTGATCCTTCTCAAGTTGAGTCAGAAGAGGCAGAAGTGGATGTGAGAGAAAGAGAGACACAGAGAGACAGAGAGCCAAAGAGGGCAAGAGACTTGACTTTAAGAGACTCCTGTACTGACAACTCCATGCAGTTCGGAACCAGAACGACTCCAGCTGAACCAGGGTTCATGGGAACATGGCAAAACGCTGATACTAACCTCTTGTTCAGAATGTCCCAACAGGCCATCCGCTGCACACTGGTGAACTGCACATGTGAGTGTTTCCAGCCGGGGAAGATTAACCTGAGGACTTGCGATCAGTGTAAACATGGCTGGGTGGCACACGCCTTGGATAAGCTCAGCACGCAGCACCTGTACCACCCCACGCAGGTGGAGATCGTGCAGTCCAACGTGGTGTTCGACATCAGCAGTCTGATGCTCTACGGCACGCAGGCGGTGCCCGTGCGGCTCAAGATTCTACTGGACCGGCTCTTCAGCGTCCTGAAGCAAGAGGAGGTGCTCCACATCCTGCATGGCCTGGGCTGGACGCTGCGCGACTACGTCCGGGGGTACATCCTTCAGGATGCTGCCGGCAAGGTGCTGGACCGCTGGGCCATCATGTCTCGAGAAGAGGAAATCATCACCCTTCAGCAGTTTCTGCGGTTCGGAGAAACCAAATCCATCGTGGAGCTGATGGCGATTCAGGAGAAAGAAGGGCAGGCCGTAGCTGTACCATCTTCAAAGACAGACTCAGACATCAGAACTTTCATTGAGAGCAATAATCGCACCAGGAGTCCCAGCCTCCTCGCCCATCTAGAGAACAGCAACCCTTCCAGCATTCATCACTTCGAAAACATCCCCAACAGCCTCGCCTTCCTGCTGCCATTCCAGTACATAAACCCAGTCTCAGCCCCGCTGCTAGGATTGCCTCCAAACGGGCTGCTGTTAGAGCAACCAGGACTGAGGCTGCGGGAACCCAGCCTTTCGACCCAGAATGAATATAATGAGAGCAGTGAGTCTGAAGTCTCCCCCACGCCCTACAAGAATGATCAAACGCCCAATAGAAATGCCCTGACCAGCATCACTAACGTGGAGCCCAAAACCGAGCCAGCCTGCGTGTCTCCCATTCAGAATTCCGCCCCAGTCAGTGATCTGTCCAAAACTGAACACCCGAAGAGCTCATTCCGGATCCACCGGATGAGAAGGATGGGGTCAGCCTCCCGGAAGGGAAGAGTGTTCTGTAACGCGTGTGGGAAGACGTTCTATGACAAAGGTACTCTCAAAATCCATTATAACGCCGTTCACCTGAAGATCAAACATCGGTGCACCATTGAAGGCTGCAATATGGTCTTTAGCTCCCTCCGCAGCCGGAACCGCCACAGTGCAAACCCTAACCCTCGCCTTCACATGCCTATGCTAAGGAATAACCGAGACAAAGATTTAATCCGGGCCACGTCCGGGGCTGCCACCCCCGTCATAGCAAGTACAAAATCGAATCTCACACTCACGAGCCCTGGCCGGCCCCCAATGGGTTTTACCACTCCCCCACTAGACCCCGTCTTACAGAACCCTCTCCCTAGCCAGCTGGTGTTCTCTGGGCTAAAGACTGTCCAACCCGTTCCTCCATTTTATAGAAGTTTACTCACTCCAGGGGAAATGGTGAGTCCTCCGACCTCCCTCCCAACCAGTCCCATCATTCCAACCAGTGGTACCATAGAGCAGCACCCCCCACCGCCCTCTGAGCCAGCAGCGCCAGTAGTGATGATGGCCACTCATGAGCCCAGTGCCGACCTGGCGCCCAAGAAGAAGCCCAGGAAGTCCAGTATGCCTGTGAAGATCGAGAAGGAAATTATCGATACCGCCGATGAGTTTGACGATGAAGATGACGACCCCAATGACAGCGGGGCTGTGGTCAACGATGGGAGCCATGACAATCACTGCCACTCCCAGGAGGAGATGAGTCCGGGCATGTCGGTGAAGGACTTTTCTAAGCATAGCAGGACCCGGTGCCTTTCAAGGACAGAGATAAGAAGGGCTGACAGCATGACTTCTGAGGACCAAGAACCTGAGCGGGACTATGAGAATGAGTCTGAGTCTTCGGAGCCCAAACTCGGTGAGGAATCCATGGAGGGGGATGAGCACATGCACGGTGAGGTGAGTGAGAAAGTCCTGATGAATAGTGAGAGGCCGGACGAGAACCACAGTGAGCCCTCTCACCAGGATGTCATCAAGGTGAAGGAGGAGTTTACAGATCCCACTTACGACATGTTTTACATGAGCCAGTATGGGCTGTACAACGGCGGGGGTGCCAGCATGGCAGCCCTGCACGAGAGTTTTACATCCTCTCTGAATTACGGCAGCCCTCAGAAGTTCTCCCCAGAAGGGGACCTGTGTTCTAGCCCAGACCCTAAAATCTGTTATGTGTGCAAGAAGAGTTTCAAAAGCTCCTACAGCGTGAAGCTTCACTACAGGAACGTTCACTTGAAAGAGATGCATGTCTGCACGGTGGCTGGCTGCAACGCTGCCTTCCCCTCTCGCCGAAGCAGAGACAGACACAGTGCCAACATAAACCTGCATCGTAAACTGTTGACCAAAGAACTCGATGACATGGGCCTGGACTCATGGTCCTGGACCTGAGCACCACCTCCAGCCTCCAGTCCAGCAGCAGCATCCATTCCTCCAGAGAATCCGACGCCGGCAGCGATGAGGGGATTCTCCTGGACGACATTGACGGGGCGAGTGACAGCGGGGAGTCGGCGCACAAGGCTGAGGCCCCCACCCTCCCTGGCGGCCTCGGGGCTGACGTTTCAGGGTCTCTGATGTTCAACAGCTTGTCCGGGAGCACTGGTGGGATCATGTGTACCATTTGCCACAAGATGTACAGCAACAAGGGGACGCTGAGGGTGCACTACAAAACCGTGCATTTGCGAGAGATGCACAAGTGCAAAGTCCCCGGTTGCAATATGATGTTTTCCTCTGTGCGAAGCCGGAATCGGCACAGTCAGAACCCTAATCTCCACAAAAACATTCCCTTCACTGCAGTAGATTAGTCTCAGAACGGACACTACAAATGCCAGCTCTCACCAGATGGCCTATGTATCTGAACTGCCATAGTCAGTGTGTGCTTGTGTACTTGGGGGAGGGTGTGTGTGTGTGTACACACATGTATACCTGTGGCTACATACACACACACCCACACGTTTTCTTTTCTTTAGATATAAGAAGATAAACACTAGGTGCTTTTGAAATTTTTTGTCTTTTTCCTTTATAGTTTTGAGAAAGAGGTCAGATCTTTAATTTAGAGGTGAAACAAAGTACCCTTTAAGTACACATGCGCACACATAAAAGCGTGGAACTAGCCCAAACTTTGACAGAATAACAATTTTTGGTCCTCTCCAAAGAGACGATTTGTTGTACCCATGACTGTTGCCTGCAAAGAGATAAAGGGGGGGGGAGGAAACAAAAAAGGAACTTCTTATAGTTGTCTTTTGTGAACTTTAAGGTTTTGAGAGAATCTTCATTTAAAGCATGGCAGATTCACCTGTAAATATTTAGCCTTGAGAGGCCAATGATGTAAAACAATTGTATTGATGGTTGTTTAACTCTTTTGTTTAATTTTTACAGTTACATCCAGCTGTTAGATATACAGGAAAAAAAATAGTTTGCTGGCTAGCTCTATTCATTTATGTTAGCATTAATGCACATTTTTTAAGGAAAAAAAAACATGGTCTTGTTTTTACTACCTGCTAGATATAGTGATAAAGAGGTGCTGGCATGCCTTACAGCACAGATCTGATTTTTTAAAATGTCCTGTACTAGTACATAAATCCAGTCATGCACTTTTTTTCATACACTACAAGGGGATGTGTAATATCCATGCTTCTTTTTTATCCTTAAACTATTGCCATACTTCAAGTAAGTGTCTTTTTTAAAAAATTCACTTGTATAAAAATGGTCTGGTCAGTATAGGGCACAAACGCCAAACAAAAGTATTAGTGTTAACACAAAACTGCCAACTTTGCACAAGTTTCCAGAAAAGAAAATACAATTAGTCACTCAACATAACCACAGGCCAATTTGTCGGCCACCAGGAAACCGCTTTAAGAAAAAAACACTTGGTGATGCTTTCAAGTGCCGAATGTTATTACAATCAACATTGTATCCTTCTTGCTTATATGTTAAGTTACATAAAAGGAAAACAAAGTGATGCGTGTGAAACAGCCAAGGCATTTATTCTTTAGAGGCAGGATAATATTTCAGGATACAGAAGCCCAAATTACTCACTACGGAGCAAAGCTGAATACAGTGAAAGAGCTGAATGCTCATGCGCAAGGACCTGACCCTTCTCCATTAAGAAGAAGGAAAAAGTCTGAGCTGAGTTGGTCTATTATGTGGCTGTGTAATTTGTCACAAGTACTGCAGTAGTACTATGATTCAGGCTGGTTTGATAGACAAAATCAAAAGACATTTAATGGTAGAGGCAGCAGTACTTGGAAGCTTTGCAAACATGTGCTGAACTTGAACTAAGCAATACTCCTTTCTGAGCAGCCAGAAGAAGGGGGTTTAAAATAGGATCTCTCACTGTTTAGTGTTTTGCGTTTCCCCACGCGATTTGTCAGAGAGAAATGAAAGCAAGCCTGAAACCAAGCAATCGAGAGTGAGAAAGAGCAGGGAGAGGATTCTCCAAACCTTTTTTGTTTTGTTTTATTTTGTTTCCGATGTTTACACATGTTGCCTGAGCTGGTTAACCACATCGGCAGCCTCAGCTACCACAACATACTGACTAAATGATGATATTTACTCAGATTCAATCTGCAGCCAAAACCATTAGGGTGTGCATTGCAGACTGTGTTTTGTTGTCTTTTTTTTTTAAGTGGAGGGGGCAAAAGATAAACAAGGCATATTTTGTCGAACAGGACACAATAATTTAAAGAGAATGTATTTCTTTTCTGCATTTAAGGGCCTCAAACATTTCTTTCATCAGTCTAAAAGAAATACTCCCTTTGTCTTAACTTTTTAATGGCATTTCCATTTTTCATATGTTTCATAATTATTTTTTTCTAGGTTCGCATCAGCATTCACTTCCGTTAAATTTGCCAAAGGAAACTGTTAATATGTTTCTCTTGTTACTATTCCTGTAGGATTTATTGTACCTCAGTATTTATTGTTTCCAAAAATAAGCATCATTAGTTGAGGCTTCAGTATTTTTTGTGTGAAAATTTCAGAAACAATGGAATCTTAAGCTAGATGTGTCTAGCAGCTTTATCTTTTCATCTCCTTCAGAGGATGCTATGGGGTTCATTTAATTTTTCATTTGTTCTACAGTGAGGAGAGACCAAAAGTATTTGCAGTACAAAAGAAACTATATCAAACACTATGTTTTAATGACAAATGTTTACGGTAAAAAAGCTGAGGAATTAGTGCTAACCGTTTTTGTTTTTCTTGTACCTTTGAATTCCCCAAAGTCTTAATCGCTTTATTTCAGTGTTGTTAAACTGAATAGACAGATGTTTTCCTTTGTTTTATACCATATAAGACTCTGTACAGTATGTTTGTGGAAGATTGAACTAGAATAATGAAAATTTGTTTGCAAACATTTTGGTCCTCTTAGCCTTCTGTGTTGCGCTATTGCCCCATTAACCAACTGATTTGATTCCAGAAGGGTGGAAAAAATATTTTGTTGGTATCCCAGCAAAAGATTATGGAAACACTAGCTTTGCAAGCGTATATAGACCAAATGACACTTTTATGAAATGACACATTTTCAGCGATTTTTAACAATTACACTCTCGGTTGAGATATTAGAACTCAGCTTGTACAAAATCAGTGCTTAGTCTGTTTAATGTCAACTAAAAGGTCAAAGAGCCCTAATGAGTGAATTACATAGCTGTCAGCAGGTCACAACAAAGGAACTAGGCTTAGAACAAGTGTTTGTTAACTCGCCACAAACTAGGCTGATGTGGATAGCCAGTTAGAATAAGCCCAGAAGTAACAAGATTCTCAAGCAGAATTTCCATTGCTCAGAAGCATGAATGTGTTGACCTGCCTTTTGTTGGAGAAATGACAGTGAGTCCTGGACAACCTGCCCTTTTTAAGTCTCTCCCCTCTTTGCTACTAGTTTTGTGCCTCAAGTGCCCACGTGTTACGGTGGCCTTTTAAGTGATGTATAATATTTTCCAGTTTAAAGCCTAGTTGCTTAAAAGGGACAGGGGGAGTGGACAGAAGTGGTCCAGAAGATGTAGAATCATGAAAACGTACATTTCTTCTAGTCTCAGAGTGTCGCTTGTTCTTGGGTGTGTGCCTGAGTGCAGTGTTTTGACTTAACTCTAAATCTAGTTAAGATGGTGATCCCAAGGCTTATTTGCAAATGGGAAGGATGATGTGATCACCATTTTAACCATTGAGCCCTTCCTCTCTGTCCATTCATACTCATTTCTTTTTTCATAGGAGTTTTCTGTTGTGACACAGGCTCTGTCCAGCTGCATCCATGCTAGGGCGGCTGAAAAAGGAATCAGATCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCACACCAGGCCTCCCTGTCCATCACAAACTCTCCCGGAGTTCACTGAGACTCATGCAGCATTTCATCCAAGCAACCTTTTCCCCCACTTGATTCATTTTAACCAGCATTCTGTCACAGGTACAAAACTGGGCAGTATTATTAACATGCATGTTTGCTAGGTGGTATTGAAATGTTCTGTTTTGATCATTTTAAGCTATGTGTTAGTAAGGATCAGAAAAGACTTAGTCTCCTTTAAGGACTGTCTGTGTGTTGTGGAGGGGGATGACCCGGAGCAAGAATAACAAGAAATAATAAATAATTTGGTGTTTAAAATGTGATAAAAAGCATGACATTCTTCGTTCTGCTATTAATTGTATAGAAATAAGGCAGTGCATTTCAGATCTTAGTCCAGGCCGATGCCTTTTAAAGCTGGCAGACATCTCTTTTGAAATTGTTTTTAGCACAATGGCACCACTGTCCTTATAGTGTAATTTATTTGGTCATGAGTTCCCAGGCTCTTCCAGTATGAGGAGAAAGGCACATAACTGGTTAATAGCCTGTTAGTGTGTGTATGCATATATAATATA EMBV3_27394 ACCTGTGAGCGAGGCCACTACATTTGTGGTGCGAGCGGGCAATGGCCAATGGTATAAGAT Gene GeneID:100299236|LOC100299236:XM_002685396:30_cdna Constitutive 0 NULL GeneID:100299236 2 GENE LOC100299236 NULL similar to deubiquitinating enzyme 1 EMBV3_30096 CCCTCCTTGTCTAAGGCAATGGTACTGGCATTACAAGATGTTAATACGGACCACCTTGAG Gene GeneID:614063|MGC140340:NM_001083765:61_cdna Constitutive 1 NULL GeneID:614063 8 GENE MGC140340 RMI1 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) EMBV3_33053 TTGCAACAGGAGAGCAGAAACGGCTAAAGAAGACAGACATTCCGCTGCTGCATAGACTCC Gene GeneID:520101|RASSF6:XM_002688365:195_cdna Constitutive 0 NULL GeneID:520101 6 GENE RASSF6 NULL Ras association (RalGDS/AF-6) domain family member 6 EMBV3_18146 ACCGTAACACGAGGTGGACTGGTTGGTCTTGTTTTCGGTGGCCTGTACCCTGTTTTCTTG Gene GeneID:529762|TMEM126A:NM_001037608:26_cdna Constitutive 0 NULL GeneID:529762 29 GENE TMEM126A MGC133598 transmembrane protein 126A EMBV3_21149 CCACCTGCCCCATCCCCTGGACTCCCACAGCACTTCTACCCTAGCCGGGCCCAGCCCCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40155 TGAAGACGGTGTGCCAGAGTTTCCGGGAGCATTTAGAAGAAATTGAGCAGCACCTCAGAG Gene GeneID:616862|CCDC129:XM_002686836:34_cdna Constitutive 0 NULL GeneID:616862 4 GENE CCDC129 NULL coiled-coil domain containing 129 EMBV3_35618 CTCTTCCACGGTCTGCATGCCTTTTCTGTCTCATCCAGTTAGCTCTCAGCACCATGAGAA Gene GeneID:404105|TKDP3:XM_002692481:563_cdna Constitutive 0 NULL GeneID:404105 13 GENE TKDP3 NULL trophoblast Kunitz domain protein 3 EMBV3_08050 TATGTCGTATCCATGGGGAGCTGTGCCAACGGAGGTGGCTACTACCACTACTCCTACTCA Gene GeneID:338079|NDUFS7:NM_001038022:17_cdna Constitutive 3 NULL GeneID:338079 7 GENE NDUFS7 MGC133683 MGC152557 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) EMBV3_18182 TGCACTGGCAGGTAGATTCCCACCCACTGTGCCACCAGAGAAGTCTTTAATTGCTCGCTA Gene BVT0102_070875 + 0 NULL GK000018.2:11807343-11883375 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12713 ACACTGAACTATTAAACAACAGACTCCGTGGACCTGCTGAAACAAATGGTTGCACAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11855 ACTGCTGCAGTACAGGATATCACAAATCAGAGGGAAGAAGAAACACTGTAAAGACTTGAC Gene BVV0101_000354 + 0 NULL GK000028.2:10671378-10878676 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01876 TGACGGTCTGGATAATGAAGAGAAACCCCCAGCTCCCCCGCTGAGGATGAACAGTAACAA Gene GeneID:100337181|LOC100337181:XM_002699896:2_cdna Constitutive 0 NULL GeneID:100337181 X GENE LOC100337181 NULL p21-activated kinase 3-like EMBV3_21172 GCATTTCAATTTACTGTTCACTAGCACATTATGACATCATTGCCTTCCAGTTCTGCGCTC Gene BVT0101_061573 - 1 EMBV3_34197 GK000004.2:64364287-64411818 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188094 1 XLOC_114137 NonCoding TCONS_00188094 XLOC_114137 NonCoding NonCoding - 4:64406267-64407177 - TSS140462 910 1 TCONS_00188094_2 60 1 0 0 0 0 3.65016901745803e-05 0 0 0 6.49969615849536e-06 0 0 0 4.32227250521463e-05 0.000618000502021752 7.75383995608254e-05 0 0 0 0 0 0 0 0.000163091627462296 1.00813732777205e-05 0 0 0 0 0 0 0 XM_613802.6 AVL9 PREDICTED: Bos taurus AVL9 homolog (S. cerevisiase) (AVL9), partial 2e-47 194 100.00 0.116483516483516 0 noncoding 0 0 0 0 -0.147213692081506 0.508804780925496 0.0503156619201218 0.510316558065506 CTCAAATATTTATTTTCTTACCTCCAAATATAAGGCCACATTTAAAAACCATATATATTCCACTGCTGTTGCTTGGAATTTTCTAATACTACCCTGAACAATGTCACTTCCTCCTTGGTAACTATGTCATTTTTACTTGAAGGATGAGGAATATATTTTTAAGTGAAGCTGTCTTTAAAACACATACATACACAACTACTTTCATTCCATCATTTTTCTGTCATTATCCTCTAATGAACTGAAATTTTGCCAATCAGTCTTTTAAAATATTACATTTTCTTTGAAATGCTACATTACCTAGCGGTAGCAATCAGCATTTTTATTACTTTAAGCATTTCAATTTACTGTTCACTAGCACATTATGACATCATTGCCTTCCAGTTCTGCGCTCATTAAATAATCCTCTACCTTTGTTCCCCTGCCTTCGATACATAGATTGCAGATGTCCTATTGTTCCCGTTCACCATTTCAGTGAAGAAGCTTAAAAATGACTTAATATTTGCACGTTTCTTTGCTCAGTAAATAACACTTCCCCTCACTGCAACTGAACTGGAGAGTCTACCTCTCATCAAAAGGGAAGATCTGGACAAGACTAAAAAGGAACTCGAAGGCCGAATGGGAAGGGGGGCGGAGTCAGTACATCAGCCCAACAGGGGTTCCAGGGCTTTCACAGATAAACAAAGGAAGTTGATTTTCCCACGGTGCCGCATGTGCTTCGACCATCCTAAGGTACTCGTGCGGAAGCCCAGAGCTCATTACCTTGAAAACGCAGCCCAAGTGCTGATTTTTTTTTTCTAAGGGAATCCCACTAAAAGCAGACAACCAGAAAGTCAACGGAGACCGAGATGGATGAGGAAGAGAGTGGGCCGACCATCGATTCCTTCCTCTGACTCCACAGAAGAACCTAAAT TCONS_00184282 TCONS_00184283 . 3' 21 TCONS_00184282 TCONS_00184283 . 3' 930 EMBV3_07942 CCCTGGCATCTCATTTCTTTTGGGGTCTCTGGTCCATCCTTCAGGCATCCATGTCCACTA Gene GeneID:536213|CHKB:XM_002688006:153_cdna Constitutive 1 NULL GeneID:536213 5 GENE CHKB NULL choline kinase beta EMBV3_33035 TTAGAGTCAGCTGGGCACGTGAGCGATGGAGACCATCTGGATCTACCAGTTCCGCCTCAT Gene GeneID:100337109|LOC100337109:XM_002692965:101_cdna Constitutive 0 NULL GeneID:100337109 15 GENE LOC100337109 NULL rab-related GTP-binding protein-like EMBV3_07201 CTTTTGCATCTTTCCATCCCGGTCTGAACCCCCTGGAAAGGGAGAGACTGGCCCTGGCCG Gene GeneID:535394|RERE:XM_002694049:136_cdna Constitutive 1 NULL GeneID:535394 16 GENE RERE NULL arginine-glutamic acid dipeptide (RE) repeats EMBV3_27037 TGAGGTTCCTGCCTCAACAGGAGATGAGGCCCTCTTCCAATGCACCAAACCCAGTGGAGT Gene BVT0102_130161 - 0 NULL GK000027.2:24828586-25391012 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00201120 TCONS_00063810 TCONS_00162571 TCONS_00200854 TCONS_00186491 TCONS_00054133 TCONS_00162568 TCONS_00142473 TCONS_00218950 TCONS_00231771 TCONS_00162302 TCONS_00217533 TCONS_00189709 TCONS_00131534 TCONS_00123275 TCONS_00156651 TCONS_00063805 TCONS_00186556 TCONS_00021875 TCONS_00240372 TCONS_00255144 TCONS_00066112 TCONS_00185569 TCONS_00063807 TCONS_00185570 TCONS_00131539 TCONS_00158397 TCONS_00240374 TCONS_00054137 TCONS_00131532 TCONS_00107094 TCONS_00147823 TCONS_00185573 TCONS_00032734 TCONS_00185577 TCONS_00062723 TCONS_00131535 TCONS_00149042 TCONS_00222181 TCONS_00111145 TCONS_00222116 TCONS_00131533 TCONS_00222182 TCONS_00063813 TCONS_00231768 TCONS_00186557 TCONS_00233458 TCONS_00217532 TCONS_00129560 TCONS_00207145 TCONS_00037615 TCONS_00186834 TCONS_00012043 TCONS_00011614 TCONS_00098203 TCONS_00229646 TCONS_00131537 TCONS_00070490 TCONS_00131531 59 XLOC_090915 XLOC_122768 XLOC_038536 XLOC_099452 XLOC_122505 XLOC_112543 XLOC_031942 XLOC_099449 XLOC_086898 XLOC_132269 XLOC_141259 XLOC_099184 XLOC_131531 XLOC_115747 XLOC_080239 XLOC_074829 XLOC_095111 XLOC_038531 XLOC_112608 XLOC_012548 XLOC_147036 XLOC_158076 XLOC_040830 XLOC_111622 XLOC_038533 XLOC_111623 XLOC_080244 XLOC_096851 XLOC_147038 XLOC_031946 XLOC_080237 XLOC_063005 XLOC_089710 XLOC_111626 XLOC_018972 XLOC_111630 XLOC_037450 XLOC_080240 XLOC_090919 XLOC_135490 XLOC_067045 XLOC_135425 XLOC_080238 XLOC_135491 XLOC_038539 XLOC_141256 XLOC_112609 XLOC_142940 XLOC_078273 XLOC_125663 XLOC_021445 XLOC_112885 XLOC_007593 XLOC_007165 XLOC_058449 XLOC_139141 XLOC_080242 XLOC_042268 XLOC_080236 NonCoding TCONS_00186557 XLOC_112609 NonCoding NonCoding - 4:28981025-28981694 - TSS138925 669 2 TCONS_00186557_2 107 1 0 5.04003842825042e-05 1.65220881881981e-05 2.6347800294678e-05 7.67128918004173e-05 8.04618190590629e-05 6.67340001743376e-05 5.02366887481601e-05 3.23543833301851e-05 0.000114776353102677 0.000100904156947909 2.52179144529941e-05 5.85168111144673e-05 9.65431640714993e-05 0.000139283126129092 0.000217891737511642 0.000570913133593805 0.000109102723715775 0.000139862620326037 5.3594374410669e-06 0.000294426402091814 6.63550157869369e-06 4.15164045014223e-05 9.51539900942328e-05 5.25334629035089e-05 1.81238148793375e-05 3.33537756756119e-05 2.66257992959201e-05 1.82949026561345e-05 0.000135697002898516 9.73582836758597e-06 XM_002698950.2 FRMPD2 PREDICTED: Bos taurus FERM and PDZ domain containing 2 (FRMPD2), 3e-11 73.4 78.32 0.212257100149477 0 noncoding 1 0 1 1 -0.00615637206504964 0.968424672851612 -1.02613056179786 0.00497382998682155 CAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGCTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAACACGAAGGGGCAGTTTTTCCGTGCATCGTTCGGAAAAAACCCCAGGTTCCAAATACAGCTCGACAAGCGGCCTCTCTCCCCGGGGACATCTCGAGAGGCAAGCGGAGTTCCATGCCTCAACCCAAGACGAGGCCTGACTCTCCTGTCCCCAGTCTGCAGGGACCCTGCGATCGGAGTCTGAAATCAGAGGTACCCTGCGGTTCCTGCCTCAACTGGAGATGAGGCCCTCTTCCAATGCACCAAGCCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGGCTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGCCCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAATGATGCGCTCCCCCTCGCCACTCGCA TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 TCONS_00183507 TCONS_00183508 TCONS_00183509 TCONS_00183510 TCONS_00183512 TCONS_00183511 TCONS_00183513 . 5' 49108 EMBV3_35484 TAGTAAATAAGAACATGGCTATCTAGGGTGTCTCCTGCTGTCACTCACGACCCGTTGCCG Gene BVV0101_038404 + 0 NULL GK000014.2:33892148-34040795 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053192 TCONS_00053193 1 XLOC_031671 NonCoding TCONS_00053193 XLOC_031671 NonCoding NonCoding - 14:33893498-33895984 - TSS39298 1535 1 TCONS_00053193_1 112 0.254723127035831 3 0.383501006036217 0.000124089300105853 0.000553153003909153 1.50286822668514e-12 0.000159696955512788 0 2.32980027193598e-06 0.000181374831252462 7.70640324044426e-05 8.56949855264823e-05 0 0 4.65841363779734e-06 0 8.98911448220049e-05 0 0 0 0 9.66927270866406e-05 2.11210838577172e-05 3.0542923427335e-09 0 0 0 7.51585705149578e-05 0.000479641029829924 0.000114708088854664 0 0 0 XM_586087.5 LOC509184 PREDICTED: Bos taurus transmembrane emp24 domain-containing protein 9-like (LOC509184), mRNA. 7e-56 223 82.88 0.142671009771987 0 noncoding 1 0 1 1 -0.826521334496358 0.00395631389506177 0.000179684494351087 0.997293017554606 AGGGACGGCGAAGGGAGGACGAGGAGGAGGAAAAGGAGGAATCAGAAGAAGTAGCTGGTGTCTGAGGGAGAGATATGGCTAATTGACAAGAGAAAGATTAAAAATGTGTTGGAACAACGGCAGAAAGCCATAGAAGAGACCGTGTGAGCAGTAACATCTCTGTCAGTAAGACGTGGAGACATGAGCACAAAACCACCTGTGAGGAGAGGATTGTTGTACCGTGAGCCCAACCCCGGTTGTCCACCTTCTCTTCATGAGCTCACTGGCAGTTGTATAGGCTTTTGTGGCCTTGTCGAAAAGGCCCCAGGAAATATCACTGTGAGCCTTGCTTGCAGAGCAGCCTTGCCAGTTCACAAAGACCAAAGCACCAGGCCAGGAAGTCAAGACAGAAGAAATCAACATAAACCAGCAGGAAACAAATCCAGGAGGCTGGGTACGGCCACTTCTCAAAGGCACCCATGCAACTCTCAGCTGCTCCAGTGGGCTTTCCTCTATCTGGATAGACAGGCCACAAAGTAAATGTCTGTTGAATGAATCCCTTCTCAGCTTAGCACTCACTCCACAAACACTGTTGATCATTCCTTCGGTGAACGTTGTTCTCTCAAGGAGAGAAGAGGCAGTCATACAAAGACAGAGGAACACAACTCTGCATTCAGGGAGAAGACAGACTTTTGAGAAAAGCAGACCAACACTTAAAATCGACGTGCTGTGCCCTACAGTAGCAGACATAGTGGGTGTTAGGAAGGGGGACATGGAGAAGAGATTAACCAAAGTAATCCTGCGGTAGTAGGAGAAAGGGGCTTCTCAGGTGGCTCAGTGAGCCACCTGCTGACATAGGAGCTGTGGGCTTGATCCCTGGGTCATGAAGATTCCTCTGGAGGAGGAAATGGCAACCCACTCCAGTGTTCTTACAGGGGAAGCCCCTGGATAGAGGAGCCTGGCGGGTTGCAAAAGAGTCAGACATGACTTAGCGAGAGTAAAGCAACAAAGAAGTTGGAGGAAACTTTAGAAAATCATCTTAGACGAAAATCATTTTTTTAGCTGTTATGCTCCAAATGCCTATGTGTTTGGTTAAAGTCCCCAGGAGGAAGAGTTGGTGATTTCTTTTCTATCAGGGGTTCTGGCTGTCATGTTAGAAGGTGCAGGAGCTCTTGACGGCAACGGGTCGTGAGTGACAGCAGGAGACACCCTAGATAGCCATGTTCTTATTTACTAAAGCAAAGCACATCCTCCCCCAAGATGGGTTTTCTGGTGTATGAGGGTAGAAGTGTGCTGCTGTGCTAAGTCACTTCAGTCATGCTCAACTCTTTGAGACCATCTGAATTGCAGCCCAGCAGGCTCTTCTGTTCATGGGATTCTCCAGGCAAGAATACTCGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTTCTGATCCAGTGATTGAACCCAAGTTTCTTATATCTTCTGCATTGGCAGGTGGGTTCTTTACCACTAGCACCACCTGGGAACCCCAGGGGTAGAAGCAAGTAAATGCAAAACCAGCCTTCTTCATC TCONS_00053186 s 5' 379 TCONS_00053186 s 5' 1655 EMBV3_42378 TACATCATGCAATATGCCAGTCTGGATGAAGCACAAGCTGGATTCAGGATTGCTGGGAGA Gene BVV0102_420277 + 0 NULL GK000006.2:91857981-92061506 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00030781 TCONS_00065460 TCONS_00008337 3 XLOC_017034 XLOC_040179 XLOC_003895 NonCoding TCONS_00030781 XLOC_017034 NonCoding NonCoding - 11:29218357-29218534 - TSS21780 177 0.994350282485876 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00161016385276669 1.30479698672623e-05 1.99024278661658e-05 0 0 0 0 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 9e-62 239 90.70 0.966101694915254 0 noncoding GTCAGCTTTTTCACTCTCTTCTTTCACCTTCATCAAGAGGCTCTTCAGTTCCTCTTCCCTTTCTGCCATAAGAGTGGTGTCATCTTCATATCTGAGGTTATTGATATTTCTCCCAGCAATCTTGATTCCAGCTTGTGCTTCATCCAGACTGGCATTTTGCATGATGTACTCTGAATA TCONS_00027427 TCONS_00027428 . 5' 7987 TCONS_00027427 TCONS_00027428 . 5' 7987 EMBV3_40973 CCGACGGCCGGACAAGGCCGCTCAGGCCCCTCCCTAAAGAGGCTGCTGGGGAGGGGCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39303 AGACCTGTTCTCCTACCTGAGGCATGTGCAGTGGCTGCGACGTTCAGGAGGCCCTTCCCT Gene GeneID:100337295|LOC100337295:XM_002695385:235_cdna Constitutive 0 NULL GeneID:100337295 18 GENE LOC100337295 NULL interleukin 11-like EMBV3_35280 GCTGTGGTTGGCACACAGCAAGAGCTAGGAAAGCCTGTTATTATTCTTGGTATTCACAGG Gene BVV0102_153772 + 0 NULL GK000022.2:45555762-46096227 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31626 TCGGATGATTGGGAACAGAAAAGGGATCTTCACTCGGCAGAGACAACCAAAGAGTGCAGC Gene GeneID:515687|GUSB:NM_001083436:335_cdna Constitutive 0 NULL GeneID:515687 25 GENE GUSB MGC155160 glucuronidase, beta EMBV3_00129 GTGGTCAGAATGGCTTCAACATTCCTCAAGTTACCCCATGCCCAGAAGTAGGAGAGTACT Gene GeneID:536421|CYLD:NM_001046417:363_cdna Constitutive 0 NULL GeneID:536421 18 GENE CYLD MGC137952 cylindromatosis (turban tumor syndrome) EMBV3_08855 GAGTGGCTGTTCGGTTAAGCTATTAGTAATAAGGTGAACACTGCTACTATCTGAGCCTAC Gene GeneID:538226|SESN1:NM_001101174:59_cdna Constitutive 2 NULL GeneID:538226 9 GENE SESN1 NULL sestrin 1 EMBV3_24957 AGCACCCAGTGTGTCCTTAGAAGTGGAAGAACTAGGATGGCTCTCATACGTTTCTGAGAA Gene GeneID:539150|RAB5B:XM_002687583:651_cdna Constitutive 0 NULL GeneID:539150 5 GENE RAB5B NULL RAB5B, member RAS oncogene family EMBV3_12367 AGAACTTCTCCTCGAGTTGGAGTGACGGGATGGCCTTCTGTGCCCTGGTGCACAACTTCT Gene GeneID:528013|SMTN:NM_001076879:71_cdna Constitutive 0 NULL GeneID:528013 17 GENE SMTN MGC140000 MGC155237 smoothelin EMBV3_14742 CACTATTTCTGTGACGTGCTTCCCCTGCTCAAACTTGCCTGCTCTGACACCGTCCTCATT Gene GeneID:512220|LOC512220:XM_002693721:436_cdna Constitutive 0 NULL GeneID:512220 15 GENE LOC512220 NULL similar to olfactory receptor Olr745 EMBV3_43751 CTCTTCCCAGATGGCCACTCGGGCCCACAGGTGCTGTCCTGGGCTGGCTGATGACCCCTC Variant GeneID:369023|G6PC3:NM_183364:203_cdna 458^576 1 EMBV3_20796 GeneID:369023 19 GENE G6PC3 MGC140735 glucose 6 phosphatase, catalytic, 3 EMBV3_18851 GTGTTTGCCATTGGAGTCTGCACCGGTCTGCCAGTGGCAGCCGGTTCTGGGATCCCCGAG Variant GeneID:520210|CLCN6:XM_002694039:106_cdna 280^453 1 EMBV3_10812 GeneID:520210 16 GENE CLCN6 NULL chloride channel 6 EMBV3_37407 TCGGGGGGTCGGACTGGTCGGTCGTTCTGCACACAAACAGGACAAGTGGCTTTTATACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33698 GATATATTCCATAAAAACAATACAAATTTTATGACCTATGTTCCTCTTACATGGCTTTGC Gene GeneID:513423|SLC25A21:NM_001015587:17_cdna Constitutive 2 NULL GeneID:513423 21 GENE SLC25A21 NULL solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 EMBV3_14705 ATGATGAAGGCTCCACCGTTGTCTTTCAGTCTGTCTCCTACCCTGGCTGGTTCATTGCAA Gene GeneID:100297786|LOC100297786:XM_002691350:175_cdna Constitutive 0 NULL GeneID:100297786 11 GENE LOC100297786 NULL similar to interleukin 1 family, member 6 (epsilon) EMBV3_03445 CTGAGATGTTTATAACTCGGACACTCAGTTTTCTCGACAGAGGAAGCAGGCAGGGGCTCC Gene GeneID:506218|SNX9:XM_002690364:9_cdna Constitutive 0 NULL GeneID:506218 9 GENE SNX9 NULL sorting nexin 9 EMBV3_18803 CGAGGCTCTTCCAACGTCTTTTCCATGTTCGAGCAAGCCCAGATCCAGGAGTTCAAGGAA Gene GeneID:508257|MYL7:XM_002686892:107_cdna Constitutive 2 NULL GeneID:508257 4 GENE MYL7 NULL myosin, light chain 7, regulatory EMBV3_36539 GCAGGCCTTGGCAGAGCTCCAGTGCTTGTTGCCCTAGCATTAATTGAAGGTGGAATGAAA Gene GeneID:613326|PTP4A1:XM_002689977:4_cdna UTR3_Alt 2 NULL GeneID:613326 9 GENE PTP4A1 MGC179416 protein tyrosine phosphatase type IVA, member 1 EMBV3_36888 TATGGCCCTTCCCAACCGGCCAGCCCGGCGCTTCTTGTTTCGGGGCCGGGGAGGTAATAA Gene GeneID:511713|MAGIX:XM_002700102:233_cdna Constitutive 1 NULL GeneID:511713 X GENE MAGIX NULL MAGI family member, X-linked EMBV3_21242 CCGGATGAGTATAAACCATGCCAGAAGATTTACCCCAGCAAGATCCCCAGAAGCCGCACA Gene GeneID:786606|WIPF3:XM_002686848:66_cdna Constitutive 1 NULL GeneID:786606 4 GENE WIPF3 NULL WAS/WASL interacting protein family, member 3 EMBV3_23639 CTTGAAGGGTGGCGGAGGCGGCGGAGGAGGCGGGAGCCCCAGGCCTGCCCCCTCATCACC Variant GeneID:281664|CAPNS1:NM_174261:502_cdna 86^828 2 EMBV3_04709 GeneID:281664 18 GENE CAPNS1 CAPN4 calpain, small subunit 1 EMBV3_09800 GTCTCTGGAGGGCAGAAATTTTACACAAGTCTACTTCTTCATCTGTGTGGGAACGCTATC Gene BVT0102_162011 + 0 NULL GK000025.2:37445993-37450948 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145436 1 XLOC_088833 Coding TCONS_00145436 XLOC_088833 Coding Coding ZNF394 25:37446764-37463897 j TSS108993 6159 1 TCONS_00145436_10 524 0.246630946582237 2 0.640614055568527 4.27280684929552e-05 5.92320990969517e-06 6.17133578496574e-06 0 0 0 2.07371943265938e-05 8.43645611260985e-06 0 0.000293718616033422 8.74112882160341e-05 0.000159293547829472 2.87899987504046e-05 2.19914438425093e-06 8.15889469624059e-05 0.000459714558157702 3.60821351710751e-05 0.000141539998547091 1.19294848589668e-05 0 0 5.99299716527053e-05 5.88555982282145e-05 0.000127871807380744 2.23231520438687e-06 0 1.87085168985827e-06 0.000110821392990265 9.23193374979619e-05 8.50065189919999e-05 XM_005225119.1 ZNF394 PREDICTED: Bos taurus zinc finger protein 394 (ZNF394), transcript 0.0 7490 100.00 0.674135411592791 XM_005250638.1 ZNF394 PREDICTED: Homo sapiens zinc finger protein 394 (ZNF394), 0.0 975 75.37 0.226822536125994 TCONS_00145436_10 sp|Q53GI3|ZN394_HUMAN ZN394_HUMAN Zinc finger protein 394; 2e-140 422 56.90 0.761450381679389 0 coding 0 0 0 0 0.00766509945517024 0.956500529949173 0.0151834545377931 0.758392611960369 GTCGGGAGACTATCCTCCTGGCTGCGGAGAGAAGGCGGAAGGTCCGCGTTCTTGAGAAATTCCTGAGCGGTGTTTTCAGGGCTTCTCTAGCCAAGAGGGGTCCCATCTTTAGTCTCATTTTGTATCCATTTGCGAAGTTACTCGACAGACAGGACAAGAGTCTTTGTCTTACAAGTCACGAAGTGAATGAGGCTCACGGACTCCACTCTGAATTAGAAGGCATATATCCTCCCGAAGGCAGGAGAAGGGGACGACAGAGGACGAGATGGTTGGATGGCATCACGGACTCAACGGACGTGAGTTTGAGCAAACTCCAGGAGATGTGAAGGACAAGGAAACCTGACTTGCAGTCCATGGGGTCGCAAAGAACCGGATACGACTTAAGCGACTGAACAACAGCAAATCCTTCGATACTCTCAGGAGTTTTATTTTTATATAGTACGTTGTGAATTTTCACTCAAATCAGAGATGGGATTTTGAGAATGGCTTGCTCGTGCCGTGGTCTACCTTATGAATGAAAAAATGCAAAAAATTCCTACTATCGTCAAAGAGATCTATAGCTGGAGAGGCTTAAATTGACACTGCGGTTTGTGCAATGTATTTTTATGGTTTCACTTTTTATATTTAGAATCGTCAAAAGTTTCGGCCAAAAAAACAAACAAACAAAGACGTGAAACCATTGAATCGCTGAAGTAGTAATTAGTGAAAGTTTATTGTGTACATACTAAAAAGTTAGCAAACCGGGAGCACTCAAAGCAAAACGTGGAAAGAGGGTCAGAGGTATATTGTTTTAAAGCATCTTATATAGGGTGGAGGCGTGCTTGAGTACTAAGTTGCTTCAGTCGTGTCCGACTCTGCGACCCTTATGACTATAAATTTCTCTTCCCTCTTGATACTAAGAATAGCTGGATTTCTCCTAAGCCATTATAATAGTTCGCTCATGTAACTGATCTTGTTTTCTTCTTGAATTGGCTGCTGAGGTTTCTCAAAGCAGAACTATGAGCTATCTTTTGTGAGTATACAGGAGTGTACAGTGGGTAAGTTCTAATCCTGTCCTATCCCTGGCTCCATCTTATTTATCCCTACTTTTTTTCCTTTTCTCACTTTATTTACTTGCACTGAATTGTTTTTTTTTAAAGATGAGACATTTCTTCAGTTAACTTCTATGAAAAAAGCACCAGAAAAGGCATTGGGAACACAAAAATATATCATTCAGTGATATCAGTGGGAGCAGATGAAAGCACTTGATGTTCTGCAAGTGAAGACAAAAGTTAAATTACAGGAGAAAGGGAGGAAAGAGCTAAGCAAATCACTAAATCATGATAAGAAACCAGTCATACAACCCAGACACTGATACTATTGGAGCCAAACTGGTAATCAACAGGAAAGAAGACCTATTAATACATCTCCTTTCTCTGGGAGAAGATGAAAAATGCTTGTACTGTCTTCATAGTACATAATATTCTCTTCTGGATTCTGTTACTAGTTACGTAGATGGATATTTTCTGGAGCTAGATTTGCCTGTGCCATAGAGTTTTATTTGTGAATTTGCATTGTCCTAATTCCCTTACCATCCTTGATAACCTGATCCTAGTCAAAGCCTTGTCCTGCAAAAAAGAACTTTTGACTTCCTGCCAGATCAGGATAGCGTTCCCACACAGATGAAGAAGTAGACTTGTGTAAAATTTCTGCCCTCCAGAGACTTTCAAACCACCTAGGGAGATGAGATGTAAACATTCAACAAGTTATCTCATTAAATTATCACATGTTGCTCCAGATTTGTAAAATGACAAAGATGAGCCTTGAGAGTAGTGAATTTTTTTCTCTTTAAGTGATTTTTAACATAAAAATTGGGCTTCCCTGGTGGTTCAGATGGTAAAGAATCTTCCTACAATGCAAGAGACCTGAGTTCAATCCCTGGGTGGAGAAGATCCCCTGGAGAAGAAACTGGCAACCCACTCCAATATTCTTGCCTGGAGAATTCTATGGATGGAGGAGCCTGGCAGGCTACAGTCCATGGGGTCACAGAGTCAGACAGGACTGAAGTGACTTAGCTCACACACTGGTGTAGTATATGTGCATTATATAAGATATTTGACAAGCTCTCAAGATGTTTGATTATATTTACATGGACTGAGCGACTAACACTTTCACGTTCAACATAAAAAATAATCCTGAAAAATCTGCCTTTGCCTGTTTCATGTTCTATTAATGTCCAATCAAAACAGATCACAACAGACTAGTACAGCCACTACAACTGCTAAAACCTAAAGTAGGAATTGACTACCTGTGCTTTTGCACAGGAAATAATTTGGAAATAATTTTTAAAGTTTATATTTTAAGCTTTAATCCATATAAATGTTGTATGAAATCTTGACCCTGCTTGGGAATTTGCATTCATAAATCAGGACATTAATTGTACTTAAACAAATGCTTTTTAAATGAAAGTACCCTTAATGTAACTTACATAGGGTTTCCCTGGTGGCTCAGTGGTAAAGAACTCACCTGCCAGGCAGCAGATGCCAGTTCGATCTGTGGGTTGGGAAGATCCCCTGGAGAAGGAAATAGCAACCCACTCCAGTATTCTTGCCTGGGAAATCCCACAGACAGAGGAGCCTGGCAGACTGCAGTCCTTGGGATCACAAACAGTCAGACACAGCTGAGCACAAAACACACACACATGTAGCTTAGATAATTCTTCACTTCTTAAATAATGCAGATGATTTAATATAAATGTTAAACTAAAGTATGCATGTGCTAAGTTGCTTTAGTTGTGTCCAACTATTGCCCATATATTTAACCCAGTTTTAAATTAAAATATGTCTTCAGTCCACATGGACTTTTTAAACTTATCTCTTCTGTGAAGCCTTCTACTGTACACTCCCCATCAGGCATGGTTGTTTATTTCCATCTCTGCTTATACAAATAGATGCTGCATACACCTCAAAGTATTGCGTTTACCACACTGTCCTGTAATTTAAGTGTCTGTCTCCATTAGGGGACTGTGAGCAACTTGAGGACAGGGAATATATCTTCCCAGTTTTGCATCTATAGTGTCAACTGTGATGCCTTAGCATGTAGAAGACACTCTACAAACCTTTCTTGCCTAAGTGTAACCGATGGATAAATGACCACTTTATTGTACAACTGGAACTTTTAACTTTCCCTGAAACCAAATTTATACAACTTTCTTCACAGATAATTTGTTAAGAATGACATTCTTTCTTTTGGTTATTCTCAAATAAAAGTGATGTTTATTAAACGTAGAAACAATTGAATGGTACATATTTTTATCACATATACAATTTTTCATATACAGTTATTGTTTTAAATTTATTTTACTATCATATAAAACATACTTTTAAAACATAAGACATATAATTTGACATATTCTCCAGCTTAGTATAAATGTTTAACATGGTAATGAGCCAACTTTGAGAAGAAAGTTGCTACAAAGCTAAGGCATGTGATTGCTTTTGAATGATTTTTTTTTTTGCAAAATTTTGATTATGTATTTCATACAAAGGAATGCAAGTGAAAAACAGGTTTGATATTTTTCTTTTCTTTTTTTTCCCTCTTTGAAACAATAAGATTCCTTCTCATACTTAATCTAAGGATGAAAGATTGTCAAGAATTCAAAAGGAATGAGATTTATTTTTAAAGGAGGAATATCCTTTAGTTCTGCAACCTTAAGGACTGTAAGCTCCACGCTACAAGGTGAAAGTGAAAGTCGCTCAGTCGTGTCCGACACTTCGTGTCCTCCTCTTTGCGATCCCATGGACTGTAGTCGGCCAGGCTCCTCTGTCCATGGAATTCTCCAGGCCAGAATACTGGACTGGGTAGCCGTTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGACTGAACCCATGTCTCCCGCATTGCAGGCGGTTTCTTTACCGTGTGAGCCACCAAGAGTACCTCTGGAAAAGGTTAAAGATAACAAACCACAGAGATGCACGTCACTCTTCCCAGGAGCCTAGAGAGGCCCCGGAAATGCCCCGAGGGGTGGGCACCGCAGGGAGCCGGTGACGCACTTCCGACTCGGGCTGTTCGTAATTTTTTGTCGCGGGATTTGACAGCTTCAGGTAGGGTGTCGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTGAGGTAGGGTAGCGGTTTCTGGGTAGGAGGAGTCTGGGAGGGGCCCGGGGAGGTGGGATCTCGTTTAAGACCCGACAGTCGGCAGCCGCTTCTTTGGGGAGATCCGATGTGTTCTGCGGCTTCTTGCTGGGTTTACTGTCACCTCAGCTGAAGGTGGAACTCCGGGAAAGTGCGCACGAGCGAGAGAACGATGAGTTGGAGCTGGACCGCAAGTCAAAGCACGATCGCCCCTCCGGCCCTAGGTGATGGACTTTGGACAGTGAAAGTGGAGGAAGACTCCTTCGGAAGTGGGGAGTCCGACCGGCCCTGGGACTGTCCGGATCCCGAAACTTTCCGATGTCATTTTAGGCAGTTCCGTTATCAGGAGGTGGCTGGACCGGAAGAGGCGCTGAGCCGGCTCAGGGAACTTTGTTGTCGATGGCTGAGGCCAGAGGTGCACTCGAAAGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGACAATCCTGCCCCAGGAGATCCAAGCCTGGGTGCGGAAGCACTGCCCGCAGAGCGGGGAGGAGGCGGCCGCCGTGGTGCGGTCTCTTCAGAGGCAGCCTGCTGGGACCTCACGCCAGGTTCGGAAACCAGAATTGTGAACAAAGAATTGATTCCAAAGCAAGAAATTCTAGAAGTGGAGCTTCAAGGGCAGCTACAAGGATTTCAGGAGAAGGCTCCCCTATCTTCTGAGTGTGGTGATGCCCAGGACAGGAGAGAGAAGTCCTTGGGAGACCCCTCATCGCTGAAACGCGAAAATTCTCCTGAAGATCAGGGAGTCACCCACATCTCAGATCTCAGGAATGGTCCCAGCGAAGAAGGAGACGTCAAAAACAAAGAATTCAGGACCAGTGCTGAGAGTTCAGACTTTGTTGCTGGTCAGTACGTCCCAACAGCAGGGAGACCCGCCACTGGGGATGAATATGGGAACAACTGCCAACACAGGTTAGACATGGTGAAACCTCATGAATCTCTCAACAGTGAGGAAAATCGCCATCATTCGGGCCTATTTGAGACTCAGAGGTGGTTCCATGAAGAAAGACCTTATACATGTGACACCTGTGAGAAGAGCTTCAAACAGCGTTCCGACCTCCTTAAACACCATCGAATCCACACTGGGGAGAGGCCCTATGGGTGTTCTGTGTGTGGGAGGCGCTTCAGTCAGAGTGCGACCCTCATTAAACACCAGAGGACACACACCGGTGAGAAGCCCTACACGTGTCCCAGGTGTGGGGACAGCTTCCGACAGAGCTCAAATCTCAGTCGACATCAGAGAACCCACCTGGGGGAGAAGCACTATACCTGTAACAACTTCAGGGAAACCTGCCACACCTCCAGCCACTTTAGTCACCAGAGGACACACAATGAGGAGCGACCCTACTTGTGTGAGGAGTGCGACAAGAGCTTCAAACGCTGCTCCGACCTCTCCAAACACCAGAGGATCCACACCGGCGAGAAGCCCTACGGGTGTCCTGTGTGTGGGAGGCGCTTCAGTCAGAGCGCGACCCTCATTAAACACCAGAGGACACACACCGGAGAGAAGCCCTACACGTGTCCCAAGTGTGGGGACAGCTTCCGACAGAGCTCACACCTCAGCCGGCATCAGAGAACCCACCTAGGGGAGAAGCACTACACATGTAAGGAGTGCGGGGAGAACTGCCGCACCTCCAGTCGTTTTAGACACCAGAGGACACACAAGGCGGAGCGACCCCACACGTGTGAGGAGTGCAACAAGAGCTTCAAACGCTCTTCCGACCTCTCCAAACACCAGAGGATCCACACTGGTGAGAAGCCCTACGGGTGTTCTGTGTGCGGGAAGCACTTCAGTCAGAGCGCGACCCTCATTAAACACCGGAGAACTCACACCGGAGAGAAACCTTACAGATGTCTCGACTGTGGGGGCAGCTTCAGACAGAGCTCACACCTCGTCCGACACCAAAGAATCCACAGAAATAAAGTCCCATCATTTTGACCTGCTT EMBV3_10133 GTACCGCTCGGTGGTGGATCTTGTGAAGTCTTGGTCAGAGGAGAAGCGGCATTACTTGTT Gene GeneID:533734|R3HDML:XM_002692326:101_cdna Constitutive 0 NULL GeneID:533734 13 GENE R3HDML NULL R3H domain containing-like EMBV3_43135 CGCAAGAGAGAAATCCACTGCCTTCGAAAGAAACGAATGAACAGGAGAAGCAAGCAGGCG Gene GeneID:785745|LOC785745:XM_002696647:219_cdna Constitutive 0 NULL GeneID:785745 21 GENE LOC785745 NULL similar to TMSL2 protein EMBV3_35677 GACATCGCTTTTGTTGAATTTGAAAATGATGGACAGGCTGGAGCTGCTAGGGACGCCCTG Gene GeneID:767873|SNRPB2:XM_002683740:2_cdna Constitutive 0 NULL GeneID:767873 13 GENE SNRPB2 NULL small nuclear ribonucleoprotein polypeptide B'' EMBV3_33832 CAACAGCCGGACTACCAAAGCCTACCACTCCCTGAAAGACTGAGGAATGTGAAAAAGTGC Gene GeneID:537784|PKP2:NM_001083729:14_cdna Constitutive 0 NULL GeneID:537784 5 GENE PKP2 MGC140246 plakophilin 2 EMBV3_32491 GCTACTTTGGCCTTTTCTCCTACTGCGTGGGCAACGTGCTGTCTTCTGAGCTTATCTGCA Gene GeneID:527838|LHFPL5:XM_002697202:83_cdna Constitutive 0 NULL GeneID:527838 23 GENE LHFPL5 NULL lipoma HMGIC fusion partner-like 5 EMBV3_39243 TGAGCTTCATTGTTAATGCCAGCCGCCTCTGGTGTGCGCAAAGACCTCCATCCCTTCTCA Gene GeneID:407171|LOC407171:NM_001001138:133_cdna Constitutive 0 NULL GeneID:407171 18 GENE LOC407171 NULL Fc gamma 2 receptor EMBV3_29407 AGCGGCTGACTTGGGCTGATTGTGCAAGTTCCCGTCAGCTTTGGCAGAGAACAGAATCAT Gene GeneID:505054|SCPEP1:NM_001045909:5_cdna Constitutive 0 NULL GeneID:505054 19 GENE SCPEP1 MGC133818 serine carboxypeptidase 1 EMBV3_16919 AGGGACCTCAAAGCCAGAAACGCAGCCAAGAGACATGCATCAGATTCTGGATGCCTATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17030 TGATAGACTGACTGTGAACCCACAGGACCTCTCCTGGAATACTCATGTTTGAATATACAC Gene GeneID:535325|UAP1:NM_001046404:317_cdna Constitutive 0 NULL GeneID:535325 3 GENE UAP1 MGC137629 UDP-N-acteylglucosamine pyrophosphorylase 1 EMBV3_02508 GATTGGTTATGGTAAGGTAGCAATAGGGTGCTGGCATAGGGTGGTTTCGGGTTCTCTGTG Gene BVV0102_210814 + 1 EMBV3_20034 GK000022.2:57489839-57571206 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15178 GGTGGATCTGATTCGACACGGGGGCAAGAAGATGCGATTTCTGGTTGCCAAGTCTGACGT Gene GeneID:506708|RADIL:NM_001163934:107_cdna Constitutive 0 NULL GeneID:506708 25 GENE RADIL NULL Ras association and DIL domains EMBV3_30125 CCTGGGAGGCTATGAGCCCCAGCCACCTTGTTTTGATCTCCAGTGAAAATGGGAAAGCTA Gene GeneID:525394|ARFRP1:NM_001037607:1156_cdna Constitutive 2 NULL GeneID:525394 13 GENE ARFRP1 MGC134154 ADP-ribosylation factor related protein 1 EMBV3_33136 TGTGGAGTCCTCAGAGAAGCAGAGCTGCAGGACCCCGAAGGTGATTACCGTCCCCACTTA Gene GeneID:615684|TMEM61:XM_002686374:169_cdna Constitutive 0 NULL GeneID:615684 3 GENE TMEM61 NULL transmembrane protein 61 EMBV3_42345 GTTCAACCAGCCGGCTCGCAAGATCCGTAGGCTGAAGAGCTTAAACTGGCCACTCAGCTG Variant GeneID:508221|RPL13:NM_001015543:144_cdna 150^465 2 EMBV3_00162 GeneID:508221 18 GENE RPL13 NULL ribosomal protein L13 EMBV3_35293 TCTGGGTAGGCAAGCCCAAACAAAACCGGGGAGAGACAATGGGTTTCATACACTGGAACA Gene BVT0101_001174 + 0 NULL GK000029.2:8797309-8947351 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15805 CTCACTTTGAGATGACTCTCGCTGACTAAGATGCCACATCACCTTCGTACACTCACCTGT Gene GeneID:100313957|IFNT:NM_001168279:71_cdna Constitutive 0 NULL GeneID:100313957 8 GENE IFNT NULL interferon-tau 3g EMBV3_43420 TAGGGGTGGATGAGCATTTGTTGTGTTTGTTCAAGTTGTTATATATGGAGAATATTTTGA Gene GeneID:281195|GLCE:NM_174070:20_cdna Constitutive 2 NULL GeneID:281195 10 GENE GLCE KIAA0836 glucuronic acid epimerase EMBV3_04205 TTATAAGACCTGGAGTTCCACAGAGGCAAAGCCACCGGAGTTTCGGCCTGGGAGTAGTGA Gene BVT0102_396442 + 0 NULL GK000004.2:83524733-84080412 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184719 TCONS_00184716 1 XLOC_111411 NonCoding TCONS_00184719 XLOC_111411 NonCoding NonCoding - 4:84029390-84032204 - TSS137484 547 1 TCONS_00184719_1 82 0.294332723948812 4 0.806967650195521 0.000157162916242016 0.000530583399498803 0.00068153384687923 4.9752587532755e-13 5.52618352572366e-05 0.000196589678235728 0.000258110946789537 0.000771910728754593 0.000282538306582018 0 0 0 0 0.000180678099055858 0.00010763120160036 0 0 0 5.7033962889808e-08 8.22755501864829e-05 5.92198289987969e-26 0 0 0 0.000556430005298269 0.000732531896057822 0.00213927172169539 0 0 0 XM_005216152.1 TRIM21 PREDICTED: Bos taurus tripartite motif containing 21 (TRIM21), 2e-26 123 90.11 0.164533820840951 0 noncoding GTGGTGGCACTACAACGTAAACACGCACGCATGCGCAGTGGTGCTCAAAGGCCTTGTCAGACTACAGCTATCCTTGAGGTGCAAAGTGCAATGTTGCGGAGATTCGCAAGCAATGAGGCCAGGTTATAAGACCTGGAGTTCCACAGAGGCAAAGCCACCGGGGTTTCGGCCTGGGAGTAGTGATGGCCGGGGTTGGCGAACACAGCACAGGAAGTCCACGGGGATCCCTCGTGGGGAAAGTGGCAAAAATACGAGGATCTTCCTGACCCAGGGATCGAATCTGAGTCTCCCACATTGTAGGCAGACGCTTTACCATCTGAACCACCAGGGAAGTCCTATGTATAGAAATATCCCTCAGTGATGAAGAGAATTTGCTGGATGATCGAGACTAAGACTGTTGTCCACTGTACTAGTTCTCAACTAGCATTGTGAAGTACTTACTTAGAAACTTTAAAAAAATAACCCGAGGTCCATCCATATTGTCACAAATGGAAAGATTTCATTCTTTTTTTTATAACTAAGCAATATGCTAAGTGAAACTAGTCAG TCONS_00182235 r 3' 491232 TCONS_00182235 r 3' 491429 EMBV3_25516 CCCTGGCAAAGAGCGTATTGGCTGAAGTCCCAAACCAAGTCGTGGACTATTACAATGGCA Gene GeneID:100336933|LOC100336933:XM_002685104:58_cdna Constitutive 0 NULL GeneID:100336933 1 GENE LOC100336933 NULL copine IV-like EMBV3_07328 AGAAGTCCTTTTCAGTCCTTTAAATCCTTGTTGGAGTGTAGCTGTTTTACAATGTTGTAC Gene BVT0102_030278 + 0 NULL GK000002.2:22487884-22564517 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087392 1 XLOC_052457 Coding TCONS_00087392 XLOC_052457 NonCoding Coding - 18:60488509-60489679 - TSS64890 1170 3 TCONS_00087392_3 60 0.041025641025641 1 0 0.000275213684489491 0.000253357325447325 4.9412398681094e-05 3.5471118987952e-06 3.32983298684967e-05 9.63050737917909e-05 8.39885258424552e-06 6.82422929729117e-05 3.15325901947682e-05 0.000124724906370776 6.19685444038814e-05 1.68087712545621e-05 9.31905033144991e-05 0.000241796116456638 0.000278856265105573 0.000541151049364861 0.00107843986181968 0.000547986488513499 1.2435870338062e-05 4.73330937772094e-05 0 0.000275284648321055 0.000352682041842235 0.000461218168532996 1.48044374606598e-05 2.92240105424506e-05 2.00312749136342e-05 0.000128527894316644 0.000124016366531232 0.000251304112365258 XM_002701995.2 LOC100336208 PREDICTED: Bos taurus zinc finger protein 720-like (LOC100336208), 6e-81 306 80.34 0.296581196581197 NM_003414.5 ZNF267 Homo sapiens zinc finger protein 267 (ZNF267), transcript variant 1e-12 78.8 79.55 0.0743589743589744 0 noncoding 0 0 0 0 -0.71026044145481 0.0669138792149053 0.0293471625124761 0.65424729550362 GGTCTTGTGGTCTCTAAGCCGGACCTGGTCACCTTTTTGGAGCAAATGAAGAATCCCTGGGATATAAGGAGAACGGACACAACAGCCACATACCCATGTAGGTGTGAATGGATGGAGCTGATGACTCAGGTGAGAGGTCCAAGGAGCAGTGAGGAAGTCATCCTTTGTCATGTGCCTTGGGAAGATGTGCTTCAGTGGAAATGATTTTGGAGAACTCTGGGTTAATTTCTGTTGCTGTCGTAGACGACATTGCCTGGCTTATTCTGCCTCTCAATCATTCATGAATTCAGCTCCATGATTACTTTTCTCATTCACAGTGAGAATTCAAATTCTCTTCTTGGCTTGTGACAACTTGCATGAGTTGGCTGCTCTTTCATTTCTTGGGGTTCCTAGGAAAACTGTGCCCATTGATGAGTAAATATAGGACATTTTTTTTTAAGTTTGTTTCTACCTCTAGACAGAAGTGTGTGAGTGGAGTTGCAAACAACTGCCAAAACTCTAGGAATAATGGGGACAGAATTTTTTTTTCTGATTTATAATTTCTAAAACACTGGAAGCTACAAATATGAATAAATTTCAAACTCAAGTCATTTCAGTGTATAAAGCAAAACATCTGTAAAATGAGAGAATACAAATCTCAGGGTTACTTCAATGTTTCACTTTTCTTTATGTGAACTCATTTTAAATATCTGAAGTGTATTTGCTGCAATTCCTCAATGGTAAAATACTTTATTCAATTAACTCAAAGATTTTTAAAATAAATTGGCATAATAGCTTAGAACATTTTCCACCATATTTCTAATGGTTGCTTCAAACTATTAACATTTTAGATCATATAAAGAAGTCCTTTTCAGTCCTTTAAATCCTTGTTGGAGTGTAGCTGTTTTACAATGTTGTACTCTTACACAGCAAAGAAAATAAAGTATATGTATAAATAGCCAGTCTGTTTTAGATTTCCTTCCATTTAGGTCTCCACAGGGCACTGAGTAGAGTTCTCTGTGTTCCCAACATATTTTTTTAAATTTCACTTCTTATTTAATTGCTTAAGTCTTTATTAACTTATCTTGTTTGTTATCAGCTTCCCCAGACTTTATTAATTTATCTCATTTGTTATCAGTTTCCAGTGGCCCTCAGTTTCTAATTAGTTGTATGTCAATATCATTTATGATT TCONS_00087390 s 5' 0 TCONS_00087390 s 5' 0 EMBV3_33101 CCAAGCATACCTTGCCCCCATCACTCTCTACTCATTTGGTTTTGACACTTGTTTAGCTGG Gene BVT0102_108982 + 0 NULL GK000007.2:60099413-60450228 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217293 TCONS_00217297 TCONS_00217291 TCONS_00217294 TCONS_00217296 1 XLOC_131479 Coding TCONS_00217297 XLOC_131479 NonCoding Coding STK32A 7:60352753-60496017 x TSS161858 903 1 TCONS_00217297_1 43 0.438538205980066 3 0.993717847594983 0.000715537457281206 0.00124097723156036 0.00219747969125122 0.000429272757159158 0.000786126026686831 0.00194939400643052 0.00162479684343243 0.000255328149235329 0.00117901987094695 1.67070972769303e-05 8.04992168482173e-27 6.49761032929167e-06 0.000146195748541385 9.39465541669502e-06 0.00022242613619425 0 0 0 0.00153633980268331 0.00269492112335366 0.00139830379432609 0 0 0 0.000720795229434772 0.000316317899558907 0.00161284430636528 0 5.17363037442544e-32 3.56379476817856e-55 0 noncoding GTCCATGTGAAACGCATCTGGTTTGTTAAATGATGCTACATAGGGAAGTTGGGCTCCTCCCTTCCCGCAGAGGCTGAGAGAAGGAGCACTAACTTGAGGGGTTGGTGGGGGAACAAAGAGTAAGTTTTCACGGCATACTTGAGTTTTCTCAGCAAAGCATTTTAGGGGGCTGGGGTCATTCTAGGATGAGGCTTTGAGCTGTTAGAAACAATGCCAGTGTTTAGTTGAAGTTTTTAGAGGGCAAGGTTGAGGCCTAGCTGAGAAAAGGGCTTAGAGGAGCCTGGCTAGAGAGCTAGATCAGGAGAGAACCATCACCACCAGGTGGGCCCAGTGTAATCACAAGCATCCTTAGAAGATGGAAGAGGAAGGCGGAAAGTCAGAGGGTTGAAGATGGAAACAGCGGCCATGAACCAAGGCTCACAGGAAGCTTCAGGACGCTGGAAAAGCTGGGCTGGGTAGAAAGATATGGAAGCCCTGCACACCCACACCCAGCTTCCGCTCTGAGGAGACGAGGCATCTTCACTGAGGAGACACTTTGAAGAAGCAAAGCACACGTATTCTATGCAACAGGATAAAATCCAAGCATACCTTGCCCCCATCACTCTCTACTCATTTGGTTTTGACACTTATTTAGCTGGTAAGCTTGTTGTGGAGACTCAAAGAGCTTGCATCATAGAACTACTCATGTTTTAACTGTTATTGTAATCATCATAATTTTTATCATAACCTTGAAAAAATGTATATGGAGCAGAAATTCAGATTATTGAATGTTTTCACACCTTCTTTGTCTTTATAGATATAACCTAAGAAAAAAAGTAAAATGAAAACCATTAAATCTAGGCAAATGTCATTGTTTAGGTAGTTTTAAATGCCCCAAATATACATCATGTAACTCCCCCTTTT TCONS_00217283 s 5' 46957 TCONS_00217284 s 5' 0 EMBV3_29634 AGAACTGAACGAATGCACCAGAATTTTAGAATGGGCATGTTCAAGTGGGTGGAGAGGGGG Gene BVT0102_110726 + 0 NULL GK000011.2:10516038-10545667 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026896 TCONS_00026895 TCONS_00026894 1 XLOC_015139 Coding TCONS_00026895 XLOC_015139 Coding Coding TET3 11:10540092-10646687 j TSS19198 10995 1 TCONS_00026895_9 1657 9 0.896936037675667 0.00341257216410617 0.00114169558327154 0.00248414746978123 0.00193169013001692 0.000503794501149133 0.00111400937669646 0.000481954826985749 0.000351412227926695 0.00174564854937 0.000338591437000667 3.84210090267414e-11 3.82887040142251e-05 0.00010379859126425 0.000675167904255649 0.000407482041068906 0.000206502497561954 2.88033990594385e-06 0.000110156423776384 0.000200414288312377 1.21677365397165e-06 0.000109368305687304 6.49172130472138e-06 0.000114291407116105 0.000157576033836673 0.00552507185762549 0 0.00253279643598715 5.63605038989592e-09 3.4900839135747e-07 2.84522984564001e-09 XM_005193867.1 LOC101904937 PREDICTED: Bos taurus methylcytosine dioxygenase TET3-like (LOC101904937), mRNA. 0.0 1.587e+04 99.90 0.802455661664393 XM_005264187.1 TET3 PREDICTED: Homo sapiens tet methylcytosine dioxygenase 3 (TET3), 0.0 1.361e+04 87.41 0.999636198271942 TCONS_00026895_9 sp|O43151|TET3_HUMAN TET3_HUMAN Methylcytosine dioxygenase TET3; 0.0 2937 91.03 0.99939649969825 1 coding 1 1 1 1 0.0443883742638651 0.786469119519102 0.0164101939018616 0.809503806364322 TTCAGACAGGCTCAGAGCTCAGCCCAGTTGATGGACCTGTTCCAGGTCAGATGGACTCAGGGCCAGTGTACCATGGGGACTCACGGCAGCTAAGCGCCTCAGGGGCGCCAGTCAATGGTGCTAGAGAACCTGCTGGACCCAGTCTACTGGGCACCGGGAGTCCTTGGCAAGCAGACCAGAAGCCCGACTGGGACACGGCCCCAGGACCAGCTCACACCGCTCGCCTGGAAGATGCCCACGACCTGGTGGCCTTTTCGGCCGTGGCCGAGGCTGTGTCCTCTTACGGAGCCCTTAGCACCCGGCTCTATGAAACCTTCAACCGTGAGATGAGTCGTGAGGCTGGGGACAACAGCAGGGGACCCAGGCCAGGGCCCGAGAGCTGCTCCGCCAGCAGTGAAGACCTGGACACACTGCAGACGGCCCTGGCCCTCGCTCGGCATGGCATGAAACCACCCAACTGCAACTGCGATGGCCCAGAGTGCCCTGACTACCTCGAGTGGCTGGAGGGGAAGATCAAGTCTGTGGTCGTGGAGGGAGGGGAGGAGCGGCCTAGGCTCCCAGGGACTCTGCCTTCTGGTGACGCTGGCCTCCCGGCGCCAGTCACCGGGCCACTTCTCAACTCCGAGGTCCCCCAGATGCCTCCTCTGGAGGGCCTGCCCCTGTCCCAGAGCGCCCTGAGCATCGCCAAGGAGAAGAACATCAGCCTGCAGACTGCCATTGCCATTGAGGCCCTCACACAACTCTCCTCTGCCCTCCCCCAACCTTCTCACGCCACCTCCCAGGCTTCTTGCCCCCTTCCCGAGGCCTTGTCTCCTCCTGCCCCTTTCAGATCTCCCCAGTCCTACCTCGGGGCTCCCTCGTGGCCTGTGGTCCCTCCTGAAGAGCACCCATCCTTTGCTCCTGACGGCCCTGCCTTCCCTGCAGCAACTCCGAGAACAGAGTTTCCTGAAGCCTGGGGCACCGACACCCCACCGGCAACTCCCCAGAGCTCGTGGCCCATGCCTCGCCCAAGCCCTGACCCTATGGCTGAACTGGAGCAGTTGTTGGGCAGTGCCAGCGATTACATCCAGTCAGTATTCAAGCGGCCCGAGGCCCTGCCCACCAAGCCCAAGGTCAAGGTCGAGGTGCCCTCTTCCTCCCCGTCCCCTGTTCTCCAGAGGGAGGCGCCCACACCGTCCTCGGAGCCTGACACCCACCAGAAGGCCCAGACGGCCCTGCAGCAGCACCTCCACCATAAGCGCAGTCTCTTCCTGGAACAGGCCCACGATGCCTCCCGCCCGCCACCCTCAGAGCTTCCTGCTCCTGGCTGGTGGGCGCCACCCAGCTCACCTGCCCCTCGGCCTTCCGACAGACCACCCAAGGAGAAGAAGAAGAAGCCCCTGACACCAGCTGGAGGTCCCTTGGGAGCCGACAGAGCTGGCCCTGGGATCAAGCCCGGTGTCCGGAAGCCTGTTCACATCAAGAAGTCCAGGCCACGAGAAGCGCAGCCCCTCTTCCCGCCTCTGCGGCAGATCATCCTGGAAGGGCTGAGGCCCCCAGCCTCTGAGGATGTGCAGGCTCACCCACCTGCCCCCGTCCCCACCTCACAGGGCTCTGTTGTCCCCCTGCCCCCAGAACCTTCTCTTGCGCTATTTGCACCTAGTCCCTCCGGGGACAGCCTGCTGGCCCCTACTCAGGAAATGAGGTCTCCCAGCCCCGTGGCAGCCCTGCAGCCAGGCTCCACTGGCCCTCTTCCCCCTGCTGATGACAAGCTGGAAGAGCTCATCCGGCAGTTTGAGGCTGAATTTGGGGATAGCTTTGGGCTTCCTGGCCCCCCGTCTGTGCCCATTCAGGACCCTGAGAACCAGCCAACTTGTCTCCCAGCCCCCGAGAGCCCTTTTGCTACCCGCTCTCCCAAGCAAATCAAGATCGAATCTTCAGGGGCTGTGACTGTGCTCTCAACCACCTGCTTCCATTCAGAGGAGGGAGGCCAGGAGGCCACACCCACCAAGGCTGAGAACCCACTCACACCCACCCTCAGTGGCTTCCTGGAGTCACCTCTTAAGTACCTGGACACACCCACCAAGAGTCTGCTGGACACACCCGCCAAGAGAGCCCAGGCCGAGTTCCCCACCTGTGATTGTGTGGAACAAATAGTGGAGAAAGATGAAGGCCCATATTATACTCATCTGGGATCTGGCCCCACAGTAGCCTCCATCCGGGAACTCATGGAGGAGCGGTACGGAGAGAAGGGGAAAGCCATCCGGATCGAGAAGGTCATCTACACGGGAAAGGAAGGGAAGAGCTCACGTGGCTGCCCCATCGCAAAGTGGGTGATCCGCAGGCACACGCTAGAAGAGAAGCTGCTCTGCCTGGTGCGGCACCGGGCGGGCCACCACTGCCAGAATGCCGTGATCGTCATCCTCATCCTGGCCTGGGAGGGCATCCCCCGCAGCCTCGGAGACACCCTCTACCAGGAGCTCACCGACACCCTCCGGAAGTACGGGAACCCCACCAGCCGGAGATGCGGCCTCAACGATGACCGGACCTGCGCTTGCCAAGGCAAAGACCCAAACACCTGTGGTGCCTCCTTCTCCTTCGGTTGTTCCTGGAGCATGTACTTCAATGGCTGCAAATATGCTCGGAGCAAGACTCCTCGCAAGTTCCGCCTCGCAGGGGACAACCCCAAAGAGGAAGAAGTGCTCCGGAAGAGTTTCCAGGACCTGGCCACCGAAGTTGCTCCCCTGTATAAGCGGCTGGCGCCCCAGGCCTATCAGAACCAGGTGACCAATGAGGAAATAGCGATTGATTGCCGTCTGGGGCTGAAGGAAGGGCGGCCCTTCTCAGGGGTCACAGCCTGCATGGACTTCTGTGCCCACGCCCACAAGGACCAGCATAACCTCTACAACGGGTGCACAGTGGTCTGCACCCTGACCAAGGAAGACAATCGCTGCGTGGGCAAGATCCCCGAGGACGAGCAGCTGCACGTGCTCCCCTTGTACAAGATGGCCAGCACGGACGAGTTCGGCAGTGAGGAGAACCAGAACGCCAAGGTGGGCAGCGGGGCCATCCAGGTGCTCACCGCCTTCCCCCGCGAGGTCCGGCGCCTGCCCGAGCCTGCCAAGTCCTGCCGCCAACGGCAGCTTGAAGCCAGGAAGGCGGCAGCTGAGAAGAAGAAGGTTCAGAAGGAGAAGCTGAGCACTCCTGAGAAGATCAAGCAGGAGGCCCTGGAGCTGGCTGGCATCACCACTGACCCAGGCCTTTCTCTGAAGGGTGGATTGTCCCAGCAAAGCCTGAAACCCTCCCTCAAGGTGGAGCCGCAGAGCCCCTTCAGCTCCTTCAAGTACAGCGGCAACACAGTGGTGGAGAGCTACTCGGTGCTGGGCAGCTGCCGGCCCTCCGACCCGTACAGTGTGAACAGCGTGTACTCCTACCACTCCCACTATGCACAGCCTGGCCTGGCCGCCGTCAACGGCTTCCACTCCAAGTACGCGCTTCCGGCGTTCAGCTACTATGGCTTTCCATCCAGTAACCCGGTCTTCCCCTCGCAATTCCTGGGTGCTGGTGCCTGGGGGCACGGTGGCGGCAGCAGCAGTTTTGAGAAGAAGCCAGACCTCCACGCTCTGCACAACAGCCTGAGCCCGGCCTACGGTGGTGCTGAGTTTGCCGAGCTGCCCGGTCAGGCTGTTCCCACAGACACCCACCACCCCGCTTCTCACCACCAGCAGCCTGCTTATCCAGGCCCCAAGGAGTATCTGCTTCCGAAGGCCCCCCAGATCCACCCAGTGTCCAGGGACCCCTCTCCCTTTGCACAGAGCTCCAACTGCTACAACAGATCCATCAAGCAAGAGCCAGTAGATCCACTGGTCCACACTGAATCTGTAACCAGAGAGCCTGGCAAGATGGGCAAAACACCTTTGCCTGAGGCATCTCAGAACGGGGGTCCCAGTCATCTATGGGGACAGTACTCAGGAGGCCCAAGCATGTCCCCCAAGAGGACTAACGGCGTGGGTGGCAGCTGGGGTGTGTTCCCTCCTGTGGAGAGCCCTGCCGTTATCCCTGATAAGCTCGGTTCTTTTGGGGGTTCCTGCCTGACCCCTTCCCACTTCCCCGATGGCCAGCATCAGTGGGGGTTGTTTCCTGGCGAGGGACAGCAGCCAGCCCCCCAGCCTGGAGGACGGCTGCGAGGCAAGCCGTGGAGCCCCTGCAAGTTTGGAAGCAACGCCTCGGCCTTGGCTGGGCCCGGCCTGACTGAGAAGCCGTGGGGGGTAGGGGCAGGGGATTTCAGCTCCGCCCTGAAAGGTGGTCCTGGATTCCAAGACAAGCTGTGGAGCCCCTTGAAAGGGGAGGAGGGGAGGATTCCAACCCCAGGGGCAAGCCAGCTGGACAAAGCCTGGCAGTCCTTCGGCATGCCCCTGGGCCCCAGTGAGAAGCTGTTTGGGGCCCTGAAGTCCGAGGAGAAGCTGTGGGATCCCTTCAGCCTGGAGGAGGGGACAGCAGAGGGGCCCCCGAACAAGGGGACAGTGAAGGAGGAGAAGGGCGCCGGTGGGGCGGAGGAGGAAGAGGAGCTGTGGTCGGACAGCGAACACAACTTCCTGGACGAGAACATCGGCGGCGTGGCCGTGGCCCCTGCCCACGGTTCCATCCTCATCGAGTGTGCCCGGCGGGAGCTGCACGCCACCACGCCCCTCAAGAAGCCCAACCGCTGCCATCCCACCCGCATCTCGCTGGTCTTCTACCAGCACAAGAACCTCAACCAGCCCAACCACGGGCTGGCGCTCTGGGAGGCCAAGATGAAGCAGCTGGCGGAGAGGGCGCGGGCACGACAGGAGGAGGCCGCTCGGCTGGGCCTGGGCCATCAGGAGGCCAAGCTCTATGGGAAGAAGCGCAAGTGGGGAGGCGCCGTGGTCCCTGAGTCCCAGCATAAGGAGAAGAAGGGGATGGTCCCCACCCGGCAGGCGCTGGCCATGCCCACGGACTCAGCGGTCACCGTGTCCTCCTATGCCTACACGAAGGTCACCGGCCCCTACAGCCGCTGGATCTAGGCGCCAGGGTGCCAGGGAGCCAGCGTACCTCAGCGTCGGGCCCGGCCCGAGCTGCCTCTGTGGTGCTTTCGCCCTCACACCTGGGGGCGGGTTGGGGGTGCAGAAGTCTTTTTATCTATATATACATATATAGATACGCATATATATGTATTTATGGTCCAAACCTCAGAACTGACCCGCCCCTCCTTTCCCCCCACCCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTTTCGTGATCTTAAATATTTATATCTCCACATTGGTTTTTTTTTTCCTCCCTTGTTTGGGGGGCTTTTATTTTCTCTTGTTTTTAAAACTCTATCCTTGTATATCACAATAATGGAAAGAAAGTTTATAGTGTCCTTTCACAAAGGAGTAGTTTTAAATTCCATTTAAAATGTGTATTTATTGGATTTTTTTTAAGTGACAATTGTAATGGTAAAGGATCGGCAGGAAAGGCCAGAAGCACTCACTCCTGCCCGGTTGTGCTCGGCCCGGTGAGCCTGGCCCTCTTGGGAGATGACGAGGTTCTCTCAGCCGTCGGCCCCTCATGAGCCAAGTGCAGGCTGTAGCCACCCACTGTCCCCCTGACAGACACCCTTCCCTTCAGGGGAGGTAGCCCTCAGGACAGCCTCTGTCCTCTGCAGTAGGATGGGAGAATCTGTAGAGGAACACCTGGGGTCCCTTTTCCAGTCACCGGCTTGGAGTCGGGTATGGGGGGCAGGCGCACCCCAGGCCAGGCACCTGAGATGCTGGCATAGATTTCCCCCGAAACCAGGTTGGAAGTAGATAGCTTCAAGCTTGCTAGTCTCCACACTGAATCCTCTCTGTCCGTTAGCTATCAAGTCACGTGGTACCGTGGTCCCCTCGGCAGCACCTCTGGACGGAGCTGGAATCGAGAGGTTCTCAGGAGCCTTTTTACACCAAGCTGACTAGCCAATGAATACTGGCTGAAGGAATTTGTCTTAGTGGCAGGTTTAAAAAAAAAAAAAGCCTCCAAAGTCGATGCTGATACCGAAAAGGGCTACTGTATCTTTAAGAACAAGAAGTCGAACCCAAGCTGTGAAAAGCTGGCGCAGAGCCTGGTGCTGTAGTGCTGTGCTGGGACTTCTTGATCGGGCAGGCCGCACCCGCGGGAACTCTGCACAGCAGTGTGACAGCAGGAACGCATCTCCTTATCCCTGGATTTCACATTGGACAATGGTGCATGCCTCACACCTGAGCCCACCCCCTCCACGCTATCATTTGAGGAGTGGGCCTACACTTAACAATTTTTAAATGCAAGAGTCAAACATTTTCAGCAGGTAGCTATGATTTTCCTCCCTATTTGGTGCCATTTCTCTATTTGGTCATTTTCTCCTTTCCTTCTTCCCCTCTCCACCCACTTGAACATGCCCATTCTAAAATTCTGGTGCATTCGTTCAGTTCTTTGAAATGAGAATGTGGTGCTTAATTTTTTTGACATTTGTTAAGAGAGGTTGGGCCTGACAGGTAGGAAGCAACGTCCGTCAACAGCAAGTCAGACTTCTTGGAGTGTTTGTTCTTCCTGTGGTATTAGCAAAAACGATGTCCAGCTACCCATGTGGATGTATGTGGTGCGTGAGAGGCTTCATAAGGACACAGAGGGGAATATGGCCACACAGTGATTGACAGCCAAACCCTGAGCTAAACATCAGATATTTATTGAGCAGTTTTATTCAGATGTGGGTCTTCATGAAATGAGTTTAACAATCAGATGACGATGCTGAAGGCAAGTTCCTGAGCTTCCAGGTGCCTTGTGAAAGAGCTGAGAATCGCCCCGCTGGCTGTGTACTGTAACTGTTCCAGAAGCACTGGCGGAGAGTCGCTGTGAGATATCCTAAGCATTTATGTGGTCTGGTTTTAATTGTAAATAGTGAAAAAAAATTTTTAAGCACTTTTGCCTAGATTTAAACAGCAACTTGAAAAAAGTATGTTTTAACATGTAATTGTGGGAGAAATTGTAAATAGTAGCTGAATATTTAACGTGCTTTGTCTAGCCTTCACTTTTACCATATTCTGTAAAGTTGCATTTATTTTACAGGACAAAAATGAAATATTATTGCTTTTGAAATAAATACCCAAGAGCTTATCAGGATTTCGAATTATTCAGAACTCAGATTTATAGGAAAACCTCTGACCTTCAGTTTGACAAGCTAAAGGAAGCAGAGTCTTTAATGAGCATGCTGATTTTCTAGTTTTGAGGAAAAGTTGGGTCCTTTAAATGCTATTTTGCTTAACGCATCAGTACTTTTATGCAGGTCTCATTTGACTCCGTGCTTAGGTAGATGCGGGGGGTGCCTTGAAAACTTCATTTTAAATTATCTTAAACAAGAAATACAATATTTTACAAAACATTTGGAGAATGTGACTGTCTGTATGACCCGGGGAAGCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCTGAGTGTAACCCAGGTGATTCTGATACTTGGCATGTATGAATCTCCTTGATGTGTGTTCAATAGACTCTTCCCCTCATCACCCTTTGGTAGCAAAGCCATTAGATGAAAGGAGAAACCAATACAATCTAAAAGCATGTGATGTCTGTTCCCCCCAGCCCAAACAGCCTTTGGTTCATAATTTCTAGATTAGCAGATAGGCTGCTGAGAAGTGAGTCAAGAGGCAGTCTCCATTGGACGTCCCCATGCCCTCCAGAACGGTGTTTCAGAGATTAGGTGGTGCTGTTGCCATGCTCAAGCCCATGCTGATTTTTACACACTACATGTATAACCTACCTCAAATCTCAGTCATTAAATTAGCATGCTTTAGACGTATGTTTAAAAAGTAACTATGCACAGCTCTTTATCCCCTCCCCCTTGCTGCTGAAGGTTTCTTAAAAGAGAAAAATCGAATTTTTATTTTTTACTGGCACTATCATTTTTTAAGTCTGAAAGATGATTAACAGACATTTTTATCATGAGAAGAAAAATAAAGCCATTGCAACTAAAGAACCTAACAGCATGACCAAGTTTTAGGAATAATAGTATAGCAACAGAAATGATGGAGTCCTAGAGTCATCTCCCCCAGTGTGCCCTGTCCACAGATGCCATCCACATGCAGTGCAGACAGTTGGTTCTTCTTTTGTTTTCCCTGCCTTTTTTGCATGCAAGGAAAGTACTTGCAAAGTTTTGTGCTAAGAAGTTTTTAAAATTAAAAAAATCGCTTTGCGGCAGGTTCTCGCAAAATAACTGGTGCTAGCTCAAGAAACCGTTATCCAACCATCAGAAATCTTGACTGACGTGTCTCATGGCTTTTGAGGTTTCTTGTTGTTGTTGTTTGGTGTGTGTTCTGGCAGGGCCTAGGTTTCCCACACTCTGGCTTCATGGGTACTGCTTTGCCGGCCCACTGAGATGACAGGTGCGCATGGAAAGAGGTCATACCCGCCCCTCTTGGCCCTTTCACCAGCCTCTTTTGGAAACAGTAGTTTGCAGAGCGAGGGACTTTAAAAGTGCTGAAGCAAGGAAAGAAGGAGCAGATCTTAATTGCTTTGTACCCGGCAGCAGTGGGTATGCGAGGATGGGTGACAGTGAGTAGATGGTAACCTGATTCCATTAAGAGAACCCAGCCAGGCTTCATGAAGTTGACCACCGCCAGATCCCACACCAGGGCAGTGCTGCGGAAAATTAAAATGATAGCCCCGACGTGCCTCAACCAATCTCTTTCCTTTTGTTACTGAAGTGTGTTTTATGGACTAGGAAGCATTTTTATGAATTGAAATAGTCTAAATAAAATGGTGCTATGGTGTTTTAATGTGACTGTCCCTGATCCTGTCCTGCTGAGGTGCTATCAAGGTTCTGAAACCACAACCAACCAAAAACAAGGTGGGCTCCAGTCTCTCTCGGCTTCTTCCCCTGCCCCCCTTTTGGTGCTGTCTCCTTAGACTTCTGTTTACGTGCTAGAACCTGCTCTGAGCAGTTTTTCTGTTTTGTTTTATTCTCCCCTTGTTGGCCACACAGAAAGGCGAGTCTCGAAGGCAGCCAGCCATCTTACTGGGGCGGGGAGTGGGCCTGCCTGGCTTGGAGGTGGCGGGCATGCTGGTTTCACATGTGTCCTCTTGGGTCTATCAAGAAAGGAAGCGTGAAGGGGTTTTGGGGGGTTCTTTGGAGGAAGGGGAGTCGGGTGCTTCTGCGTCTTCTAACGTGGCAGGCATTCTTGCTGTCCAGGGTGCTGACTAGATGTCTCTGAGAGTTCCAAAGGTGCTCTGCAGGCCAGGGTGGGCCGGATGGGCCTCCTTCCTCCCCAGCACTGGCCAGGACTGTGGCGGGCAGGGGGCTCATTCCTTTGCTCTTCACAGCCTTTGCCCCAGCATTGCTTCTGCCTCTCGCTGGTATCCCCTCGTGTTCAAACTAAAGGAAGGAGCTTTGCTCACTTGGTACCACTGAGGCTGTTTTTAGTTGGTGCTATTCCAAATTTCTTCTTGGGTCCACAAAAGTTGATATTTTAAAAATTCAACAGGAAGCTCTGTTTTGTGTCATCCACTGTCACAATAATTTTTTTTTTTTTTTAAATACCTCAAAAACAGGACATCATGACAACTTTGGTAAAGTAGATTCCAGGAGGGTCTGATACATACAGGTTGTCCATTTGATGACCTACTTGACCTTGAAGAATCTGGGGTCGTTTTAGTTTTCATTCTTCAGTTAAAATGGCAGAATGCTTAAAGGAAGGACTGTGGTTGACTTTTATTTTGTTTCAAGTTTTGCTTTTGAATAAAATGTGAATTTCCTATGCCCATCTCATCGAGCTTTTTCAGTCATTGTTGCTGTCATTTGAAATGACTCCCTCACAACCTATCTTTATTGACCAGCTGCATCTGCTGTAGCCAACTTCAACATACCCTGGACCAACCTGAGTGTTTTTTGAGGTGCATACCCCCAGCATAGGTTATACAGTCCCGCACGCACTCACACGCACAGGGAGAGTTTTTCCATGTGCGAGGCCCCGTCCTGGCACTCCCAGCCCTTCCTTCCGCAGAGCTGCCAACAAGAGAAAAGCAATAGGCTTCTTCCCTGAGCAGAGATTGCAGCACAGAAATGCAAGGTCTACCGTCGCTTTTTGCCTAAGAATCAGTGAGAATTGGCCTACTTCCTCGTTTGCTCCTCTTCTGATATCAGGGATGATTTTTGTAGTGGTGTTGTTCGCTCTCTTTTCTCATTTTGACTACCTGTCATTCAGGGATAACTCATCATTGTCACATGAGGATTTTAAAAATTCTATTTGGCTCATTGAATATCCAAATTTTCTTGGTTCCAATAGTTTTTTTTTTTTTTTTTTTTCTTTTAAGGGGAAAAAAGGAGGAGAAAAACAGGAGTGACGTAATTTCTTTTTCATCTATTCTAATTAAAGAAACAAGGGCAGGTCATATTGTGGCATATTAATGCATTGGACTTAATCTAGAACCCCTGTAGCTTTTTGATGTGTTTTATTTCTTCTCTCTTTGAATTCCTGTTTGGTTACTTGGCTTCCAATGGAGGTGAACTTAACAACCATACTTGAATATTCCGTCTTGACTTTGTAACTGTGGCTACTTGAAATGAAGTTTATCTGGGGTTGATGGATGAATGGTAGATTTTTGCAATGTCTCAAGGCAATAGGATGTGTATTATTAAACTGTAGATATTCTTAGTACAGTAAATTTATGCTGATAATTTTATTTTGTATAATTTTTACTTTTTTGTTAATATTTTTTCCTCCCACTTTATTGGTTTGCCTCCTGAGCTACCCTCCTTGCCCTCCCTTCTCCCCCAGTGTTTCAGCAGATTTAATTTAGGGTGCCTAGAAATTGCAAGTATGTATCCTTTTTTGATTTGTATTTTATTATAATTTACACAAACAACTGGGTTTGTGAACTGTATTACTCCTGGTATCTTTAAAATATTGTGGGTGTTTTAATAAATTTTATATTTATTTTT EMBV3_43205 CAGCTTCAAGGTGACCAAAGGAAAAACATTTGCCAGTTTCTCTTGGAGGTTGGCATTGTC Gene GeneID:513481|EIF1B:NM_001037598:92_cdna Constitutive 0 NULL GeneID:513481 22 GENE EIF1B MGC133836 eukaryotic translation initiation factor 1B EMBV3_30100 ATTCACTAACGGAGGAGGCAGGTGACCAAGGAAACGAAGGTTGATTTTCCCATTGAGACC Gene BVV0102_351918 + 1 EMBV3_37975 GK000011.2:2398017-2401654 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023737 1 XLOC_014350 Coding TCONS_00023737 XLOC_014350 Coding Coding NCAPH 11:2400493-2425685 j TSS17591 2463 1 TCONS_00023737_5 424 10 0.902623952999087 0.000275372255414871 5.21945300992804e-207 9.88955844670985e-212 6.68340038660477e-06 1.16927458533912e-137 0 8.06127983551903e-05 0.000302818906623002 4.54278229332491e-206 9.32337649498791e-06 7.83352819805261e-06 2.47272469456769e-06 2.63615384866537e-06 2.27245327291061e-05 0.000512757206129282 6.8123707330913e-05 0.00105853862500089 1.4492814989121e-05 1.76808880617944e-05 6.05270600031697e-05 2.54120713037014e-05 0.000114068957794827 1.97378537791453e-05 0.000267350065201561 0.00014890963520932 8.87826462850556e-05 0.000227992657061989 6.44725344494147e-05 6.58776234223996e-05 7.14485020785284e-06 XM_005212293.1 NCAPH PREDICTED: Bos taurus non-SMC condensin I complex, subunit H (NCAPH), transcript variant X2, mRNA. 0.0 4268 100.00 0.960211124644742 NM_001281710.1 NCAPH Homo sapiens non-SMC condensin I complex, subunit H (NCAPH), 0.0 1362 84.28 0.507511165245635 TCONS_00023737_5 sp|Q15003|CND2_HUMAN CND2_HUMAN Condensin complex subunit 2; 0.0 659 82.16 0.936320754716981 1 coding 0 0 0 0 0.0316189087858952 0.84466580648434 0.0227046536676182 0.661388698781641 GAGCAGGTTTGTGGCTGCTGTGGGCCAGCAGGAAGGAAACACGGATGGAAAGAGATGTAGTTTTGAAGAGACTTTTAGCAACTAAAGAGAGTCCAGCAATGGATTGAGCAGATAGAGTGAGGGAGAGGGAGGTGTCCAGGATGGCTCCTGGGTGCTGATTTGGGTTCCTGGGTAAACTTGTTTTCTTTGTTCTATCGAACACTGCCTTATACGAAAGATTTGAAGGTGGTCACTGGGAGCACAAGTTTGTGCAAAAGGTAAATCGGCCTAAAAAGTCGTTTTCAACGGGTAGTACTTTTTTTGGTTACCAAAATGACTGAAGGGCATTCAGTGTCAGGGACACTGAACAGTCCTACAGAGAGGGCAAGAGTGTCACATGCTAAGAACTGTTTCACCCTGAATGCCAATAGCACCCTTGCGAAGAGGCACTGTATAAAATGCAATGTGTTAAGAAATTATAGGATGCTCTAGGAACACTTGGGGGAACAGTCTTTTCTCCCATAATACAATTCTTTGGATGCAATGATGGAATGAACAGACAGGCAGCACAAAAACACCTGTCTCACTTCCAATCTTAACCTTACTTTTTTGACAGGGGATAAGATATCTAGGAATCTTTTAGCAAGAATATATATTAACGACAGTCTTCATTAAAGTACACACAATATTTTGCATCAGTTCTTCCCCCGCCTGTTAACGCTCTTCATTCCGGTGTCCGCTCCCTCTCACCTCCATCCCACATCCAGTCCATCACTTTCCGCCTCCTTAGTGGGTGTTCTGCTGCCCTCACAGCACAGGTCTCAATGGGAAAATCAACCTTCGTTTCCTTGGTCACCTGCCTCCTCCGTTAGTGAATTTCGTGAAATCAGAGGTGCCGCCGGCTCAGCTCCACGCTCGGTTCTTAGGACCCAGTTTCGCGTCTAGCGCTTGAAAGGATGGAGTCTCCATACTATTTCGGGGGGATGGCGTGCTCCACAGATCCACTACGGTCCACCCTCACGACTCGAGCCGCGAGCCCTCAACCCTGATTTCTCACTTCCACGCGCTGGGCGAACTCTCCGCGCGGGGGACTAAAGCGGTCTGCGCAGGCGCGCCTCTGGCCCCGCCCACGTTGGCGTCATCACGGCCGTTACGGCGACCTGGCGTCTCGGCGCGCAATTTAAAACCAGCTCTGGCGACGCGGAGGACAAGATGAGACCTCCCTGCTCTGGGCCCCGTGGACGCCACCACAGCACTGCCTCACCTGCAGAGTGGGCGTTCCCCACGGCCCTGCCCCGGAAGGCCCCTCTCAACACTCCTGGCACCCCAGTCCTTGAAGACTTCCCTCAGAATGATGATGAGAAGGAGAAGCTGCAGCGGAGGCGCTCCAGGGTCTTTGACCTGCAGTTCAGCACAGACTCCCCACGTTTGCTGGCCTCCCCCTCCGGCAGGAATGTTGAAATTTCAGCGACAATGCCCAAGTTTACAAACACACAGATTACTGAACATTACTCCACCTGTATCAAACTGTCTACTGAAAATAAAATCACCACCAAGAATGCTTTCGGCCTGCACTTGATTGATTTTATGTCAGAGATTCTTAAACAGAAAGATGCCGAACCGACCAACTTTAAAGTAGCTGCCGGCACTTTGGATGCCAGCACCAAGATCTATGCTGTGCGGGTAGATGCCGTGCATGCCGACGTATACAAAGTCCTAGGGGGGCTGGGCAAGGACGCGCCACCTCCGGAAGAAGCAGAGGACCATGGTGCAGATGGAAGTGCAACTGAAACAGGAACAGCCAAGAAGGCCCCAAAGCCAAGGAAGAAGCACTCGTGCAAAACCATCGAGCAGAATGTAAACAACCTCAATGTTTCCAGCGCTGATCGAAAGTGCGAGGTCGACCCCATGTTCCAGAAGACGGCAGCCTCGTTTGACGAGTGTAGCACAGCAGGTGTGTTTCTCTCCACCCTCCACTGCCCAGACTACAGGAGCGAGCTGCTCTTCCCCGCCGACATCCAGACCCTCTCCAGCGGGGAGCCTCCCGAGCTGCCGGATTTGGGCTGGGTGGAAATGACCGACTTAAAAGCGGCCCTGCAGCAGTGTGCGGAAGATCGCCAAATCTGCCCTTCCCTGGCCGGCTTCCAGTTCACTAAATGGGACAGTGAAGCACATAATGAGTCAGTGTCGGCCCTGGTGGACAAGTTTAAGAAGAAGGATCAGGTGTTTGACCTTGATGCTGAGGTGGAGGACAGTGACTGCGAGGACTTCCCCAACGGGCCCCTGGAGGATGACTTCGATGCCAATGATGAAGCAGACCAGACTGAAGCTGGGGATCGCACCGAGCTCAGGAGCTGGAAGGAGCCCTGCCAGGTTCAAAGCTGCCATAGGAACTACAGCAGTGTTAGCGGAGCCCTCGTTTGTGGGAAGATGGTGAGCAAGAACTGTGACAGTCGTGTCATGTGGCCGGAAGCCTTGTGTGTG EMBV3_30214 TGCCCGCCTGGTCCTCACTACACCGTCTCCTGGGCCCGTCTCTCATTCCTGCTGCCTTTA Gene GeneID:100336755|LOC100336755:XM_002697087:632_cdna Constitutive 0 NULL GeneID:100336755 22 GENE LOC100336755 NULL protein tyrosine phosphatase, non-receptor type 2-like EMBV3_41698 CTATGCTCTGGCACTCATCATCCTGGGTCTCCTGTTTATTGCACTGGTCCTGGTGTGGAA Gene GeneID:100297162|LOC100297162:XM_002696676:317_cdna Constitutive 0 NULL GeneID:100297162 21 GENE LOC100297162 NULL hypothetical protein LOC100297162 EMBV3_26554 AATGTTCATTCTTGTCTCCTATGTCCTGATAATCCGTGCTGTCCTGAGCATCGTGGCCCC Gene GeneID:788825|LOC788825:XM_002693312:159_cdna Constitutive 0 NULL GeneID:788825 15 GENE LOC788825 NULL similar to olfactory receptor, family 51, subfamily T, member 1 EMBV3_03498 CACTCATGTGGAGAGTGACAGTATGAGCATTGTAGGCGTGGAAGCCAGAAACATCGGAAC Gene GeneID:528919|FBXW12:NM_001128501:3_cdna Constitutive 0 NULL GeneID:528919 8 GENE FBXW12 NULL F-box and WD repeat domain containing 12 EMBV3_06456 CCCTGGAGGCAGACCCATTCATAAAAGGAAAAGAGAAGACTCACCTTGGGATCCAGTGTC Gene GeneID:534254|FAM54A:NM_001017948:32_cdna UTR3_Alt 2 NULL GeneID:534254 9 GENE FAM54A NULL DUF729 domain containing 1 EMBV3_04797 GAGACGTGTACACACAACATTAACTGTGACTTACACACAAATGGTTGACTTCAAAGTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01781 GTAACTTTTTTAGCTGAGCAGTGATCCTTTTGAAACTCCTGGAGATGTTTTTGCGACCAA Gene GeneID:533646|RIT1:NM_001098078:177_cdna Constitutive 2 NULL GeneID:533646 3 GENE RIT1 NULL Ras-like without CAAX 1 EMBV3_38405 CTTAACATCTTTCCCCATCCAGAGCTGGCTTCATTCTGGTCCTCCTTAGTTCTGTCCATG Gene BVT0102_019152 + 1 EMBV3_01307 GK000003.2:51870037-52014637 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177473 1 XLOC_107247 NonCoding TCONS_00177473 XLOC_107247 NonCoding NonCoding - 3:51932820-51933035 - TSS132232 215 1 0 0 0.000467369141025195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.17710924340112 0.341083817979628 -0.0080980568355408 0.886830071458261 AATCACACCTAGAAGTCTAGTCTTATATCTCCAACTTCCTCCTAAACTTCAGCCTCCCTTCCCTAAACTTAACATCTTTCCCCATCCAGAGCTGGCTTCATTCTGGTCCTCCTTAGTTCTGTCCATGGATCACCACTCTTCTGGCATCACCTGTAATTCTTGCCTTTTCTCCAGACCCCATATCTAGTGCACCTCTGAAGTGTCACTGATTTGTC TCONS_00173391 TCONS_00173392 . 3' 60002 TCONS_00173391 TCONS_00173392 . 3' 60216 EMBV3_24180 GTCCTGCCAAGTTACCATAGCAACCAGCAACTCCAGGGCACCACAACAGATAATGGCTCA Gene BVT0102_121962 + 0 NULL GK000004.2:96417262-96581219 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18660 CAGATGGAGATAAGGATTCCAGATGGCACATGGGGGAAGATGAGAACAGATCGTACGTGG Gene GeneID:541221|ZBTB8A:NM_001076264:169_cdna Constitutive 0 NULL GeneID:541221 2 GENE ZBTB8A MGC142477 ZBTB8 zinc finger and BTB domain containing 8A EMBV3_36412 TGTGCGCCACAACAAGAGAAGCCACCGCGATGAGAAGTCAGACACTGCAACTGGAGAGTA Gene BVV0102_225782 + 1 EMBV3_23548 GK000029.2:1019331-1032161 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162875 TCONS_00162876 1 XLOC_099751 NonCoding TCONS_00162876 XLOC_099751 NonCoding NonCoding - 29:1029657-1030261 - TSS122203 604 1 TCONS_00162876_1 46 0.986754966887417 1 0 0 8.31819433479847e-05 9.57573561494018e-07 1.37485909808991e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0010712810850911 0.000291699423874237 1.75911461112512e-05 0 0 0 0.000772379391919336 0.000582733154375375 4.85029110790147e-06 0 0 0 NM_001192140.1 TBX21 Bos taurus T-box 21 (TBX21), mRNA. 9e-56 221 75.69 0.516556291390728 0 noncoding ACAATGGCCTCTTTGCTGTTTCTTGAAACTACCAAGCTCTCTTCTGGCTGAACCTTTAAATCTGCCAGAAAGGATGTTTCTCCAAATAACCTCATGGCTCACTCTCTCATTTTTTCAGGACTTGGCTCAAACGTCTCTTTATCGGCAGCTTTCCCTGATCTCTCTCTATAAAATGTGTAACAGTCTGATTCCACTTCTGGTGTTTGACTGCTGACAGATATTAAGCCTTACCCCTATCCTTCCTCCCCTTCTGCCCCCACGTTTGTGTGATAAGAAAGCCTGGCTGTGGGCTTCCCCGAGTGGCTCAGTGATAAAGAATCCTCCTGCCAATGCAGGAGACACGAGTTCGATCCCTGGTCTGGGAAGATCCCACATGCCGCAGAACAACTAAGCCTGTGCACTGCAACTATTGAGCCTGTGCTCTAGGGCCCTGCAGCTGCAACTTCTGAGCTCACGTGCGGCAACTACGGAAGCCTGTGTGCCCCAGAGCCTGTGCGCCACAACAAGAGAAGCCACCGCGATGAGAAGCCAGACACTGCAACTGGAGAGTAGCCCCCGCTCGCTAGCGCAGCAATGAAGATCCAGCACAGCCAAAACTAAATAA TCONS_00164346 TCONS_00164347 TCONS_00164348 TCONS_00164349 r 3' 1901 TCONS_00164346 TCONS_00164347 TCONS_00164348 TCONS_00164349 r 3' 2504 EMBV3_01477 CTTTTCAGATAATTTGTATATAGGCAGTTTAGTTTGCAGGCAAATTTTTGTGATCCTTAG Gene BVT0102_155459 + 1 EMBV3_18542 GK000003.2:52696493-53384336 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42973 CAGAGGCAGCTCAATACTGCGCTTCCACAGGTGAGAGAGCGATTGCGAGTAGCGCTCGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06330 TCCCTAAACCAAGGCCCCTGTAGTCCCCTCTTAGTCAAATACAAAACATACCCACCTCCC Gene GeneID:281189|GFAP:NM_174065:176_cdna Constitutive 0 NULL GeneID:281189 19 GENE GFAP MGC139638 glial fibrillary acidic protein EMBV3_02523 ATCTCCGCCTCAAGGAAACTGCAGCTGAAGGACTTGTGCCGACAGCTCCACGCTCGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27661 CTGTGGCCAGGAGGTTGGTGGCTGAAAGGTTCACACAGGGCTATTTGATGGACCCAAAAA Gene GeneID:407159|HMGCR:NM_001105613:221_cdna UTR3_Alt 2 NULL GeneID:407159 10 GENE HMGCR MGC166255 hmg-coa-r 3-hydroxy-3-methylglutaryl-coenzyme A reductase EMBV3_31318 CGACAAGAGCTTCTGGAGCTTGTAACCAGTAGACTGTCTCCCTGAGGGACCCTGAGTTTT Gene GeneID:535280|NBL1:XM_002685791:664_cdna Constitutive 0 NULL GeneID:535280 2 GENE NBL1 NULL neuroblastoma, suppression of tumorigenicity 1 EMBV3_16676 GGGCCCCGGAATTGGTCCTCCGGAGCCGTGGCCCGCTGCCCCCTGTCCACTGGGCGAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01546 TGAGCAAGGCGGGCCCGGATACGCCCCCAGATATCAGTGAATGCTCCAGTCAGCCTTGTC Variant GeneID:541273|FBLN7:XM_002691125:110_cdna 312^482 1 EMBV3_36792 GeneID:541273 11 GENE FBLN7 NULL fibulin 7 EMBV3_36204 AGAATCTGAAAGAGCTATTTAGCCAGTTTGGCTGTGGAAGAGATGAATGGAAAAGAAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07978 ATGCCCATCCGCAAGGACGACGAGGTCCAGGTGGTCATCACCAGGCTAAAACTGGACAAA Variant GeneID:534970|RPL26L1:XM_002696272:76_cdna 189^338 1 EMBV3_17909 GeneID:534970 20 GENE RPL26L1 NULL ribosomal protein L26-like 1 EMBV3_14580 GGGCCAGGAAAGCTTCTACCCATACGTGGAGGTCGTTTTCACCATCACAAACGAGACCCA Gene GeneID:100296324|LOC100296324:XM_002694868:839_cdna Constitutive 0 NULL GeneID:100296324 18 GENE LOC100296324 NULL similar to transthyretin EMBV3_23391 CCTTCCGGGTGCAGTTCAACAAAAGGGCGGATCTTTCTTACTGTCACGGCAGAACTGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02454 AGCACCATTTCCAGCAACATGGATGGACCTAGAGACGACCAGACTACGTGAAGTGAGTCA Gene BVT0102_056551 + 1 EMBV3_17591 GK000022.2:8161092-9039758 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129796 1 XLOC_078509 NonCoding TCONS_00129796 XLOC_078509 NonCoding NonCoding - 22:8359265-8359806 - TSS96663 541 1 TCONS_00129796_1 45 0.491682070240296 1 0 0 0 0 0 0 0 0 3.64431488227123e-06 0 0 0 0 0 0 0 0 0.000460321257812009 0 0 0 0 0 0 0 0 0 0 3.55089636989469e-05 0 0.000266716683411902 XR_238040.1 LOC101907673 PREDICTED: Bos taurus uncharacterized LOC101907673 (LOC101907673), 3e-35 152 73.63 0.482439926062847 XM_005249968.1 AOC1 PREDICTED: Homo sapiens amine oxidase, copper containing 1 (AOC1), 2e-07 60.8 72.22 0.197781885397412 0 noncoding 0 0 0 0 -0.0195876885815429 0.880745153716104 -0.00798131730115303 0.864540287102707 TATATAGTAGGTCTTTATTAGTTTTATTTTCTTATATAAAGTGATATGTGTATGTCAGTCCCTATCTCCCAATTTATCCTCCCCCCCTTTCCCCCGGTAGCCATAAAATTGTTTTCTACAATCTATTACTGTTTTGTAGATAAGTTCCTTTGTACCGTTTCTTTAGATTCCTCATATAAGTGATATCAAGTGATACTTGTCCTTCCCTCTCTGACTCACTTCACGTAGTCTGGTCGTCTCTAGGTCCATCCATGTTGCTGGAAATGGTGCTGCCTTTTTAGGTTACGTGGTTGCTCCCTGTCACCACGTTTTGCAGTGCTTCTGTTTGTATAACAGAGGGCAACTGAAGGTTGATAGGTTGACCAGATAGCCACAGCTGTCACAGCTTCAGTCTGTCAGTGTATGTGAAATTGAATCCCTAAACCACTCTTTGCAAGAAAAAAAAAGTGCCTGAGAACTTTCCTGAGCTCAGAGGTGTGTCCCCAGTGACAGGCTCTGAGGACAAAGGTGTAGACAAAGTTTAAGCAGCTGGGGTGTGGTG TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 195315 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 195855 EMBV3_32388 GCAGGCTGCTCAGAATTTGCATTGAGTGAAACAGGGTGAAATTCTCCTCCACACTCTGTG Gene GeneID:535099|MTMR3:NM_001081605:74_cdna UTR3_Alt 3 NULL GeneID:535099 17 GENE MTMR3 MGC143436 myotubularin related protein 3 EMBV3_39380 ACATACCGCACACACATATACCAGATACCTGCAGCAATGAGCTCCCATTCTTTCCCACCC Gene BVT0102_245435 + 0 NULL GK000022.2:12679639-12681729 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07895 TTTAAAGAACACTCTTTTCCCCCAGATCCTCAACCTCCTCTGGCATCAGCATCTCGGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41933 GAGGCCGCCGTGCTGTCGGTTACACTACGTATGCTGTAGAACCATTTTGTATGTCGTGTA Gene GeneID:506031|ZMYND8:XM_002692489:587_cdna UTR3_Alt 2 NULL GeneID:506031 13 GENE ZMYND8 NULL zinc finger, MYND-type containing 8 EMBV3_32209 ACGGACCACCATTATACTCCCCAAGAGACCCCCTAAGACCACAGAAGATAAGGAGGAAAC Gene GeneID:505641|POLR3GL:NM_001075213:53_cdna UTR3_Alt 2 NULL GeneID:505641 3 GENE POLR3GL NULL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like EMBV3_34354 CAGGTCTTGTGTTTTAACCCATTCAGCCAGTCTGTGTCTTTTGGTTGGAGCAGTTAATCC Gene BVT0102_125403 + 1 EMBV3_17129 GK000015.2:80064754-80107690 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066229 1 XLOC_040943 NonCoding TCONS_00066229 XLOC_040943 NonCoding NonCoding - 15:80075552-80076906 - TSS49972 1354 2 TCONS_00066229_3 55 0.902511078286558 1 0 0 0 0 0 0 0 0 0 0 0.000170170911650387 1.69068242664129e-06 0 0 0 3.62348425664693e-06 5.8519027550652e-05 0.000429157302112176 0.000111185463828379 0 0 0 0 1.35510237018436e-05 1.23815668512927e-05 0 0 0 0 1.43415375718924e-05 0 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 3e-54 217 95.56 0.0989660265878877 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 6e-37 159 69.42 0.321270310192024 0 noncoding 0 0 0 0 -0.0753079598051656 0.665360107932601 -0.00975113707907515 0.83930932210063 TTTGCTTGTTCTATCTCTAGTCTTTTAAGTATAATGTCAGGTTTTCTTAGGTTTGTGATTTTTCTTCCTTCCTGAGGTAAGATTTGTCACTATAGACTTTCCTCTTAGAACTGCTTTTGCTGAATCCTATATGTTTTGGATGATTGTGCTTTCATTTTCATTTGTATCCAAGTGTTTTTTTTTTTTTTAATTTTCTGTTTTGTTTCTTCTGTCATCCACTGGTCGTTTAGTAACATATTATTTAGCCTCCACCTAGTTTACAGTTCTTCTTTTTTTTTTTTCTTGTAGTTGATTCAAATATCATAGTATTGTTGTGGGGAAGATGCTTGGTGTGATTTTTATTTTCTTAAATTTACTGAGGTTTTCTTTGTGGCCCAGCATGTGGTGAATCTTGGAGAATGTTCCCTTGTGCACATGAGAAGAATGTATATTCTGCTACTTTTGAATGGAATGCTCTATAAATATCAATTAAGTCTTCCTGGCTTAACATGTTATGTAAGGTCTGTGTTTCCTTATTTGTTTGCTGGATGATCTGTCCATTAATGTATCACTGTCATTTTCCCTTCTCCTTTTCTTGGCTGTATTTGACTTACGTATTGGGATGCTCTTATGATGGATGCATACATGTTTAAAATTATTACATCTTCTTCCTGGATTGATCACTTAATCACTATGTAGTGTCCTTCTTGTCTTTTATACTGGTCTTTATTTTAAAGTCTATTTTGTCTCACATGAGTATTGCTACAGCAACTTTCCTTTGATTCACATTTGCATGGAACTCCCCTTTTTCATATTTTCACTTTTAGTCTGTATTTGTCTGTAGGTCTGAAGTGGATCTCTTAAAGACAACATATATACAGGTCTTGTGTTTTAACCCATTCAGCCAGTCTGTGTCTTTTGGTTGGAGCAGTTAATCCATTTATATTTAAAGTAATTATTGATATCCATGTTCTTATTGCCATTTTTGGTAACTGTTTTGAATTTGTTTCTGTGGGCCTTTTTTCTTCCTCTTTTGTCCTCTTCTCCTGTGATTTGATGGCTACCTCTAGTGTTGTGTTTGAGTTCATTTTTCTTTATCTGTGTGTGTATCTGTTGTATTGGGTTGGCCAAAGTGTTCATTTGGGTTTGTCTGAAGACCTGAATGAACTCCTTAGCCAACCCAATAGATTTTTGGTTTCAGGTTACCATGAGGTTTTGATATAGAAGTCTGTATATAAACAAGAGGGTGTTTGTTATGACCAGTGCATTTTCTTGGCAAAACTCTATTAGTCTTTGCCTTGCTTCATTCTGTATTCCAGGGCCAAATTTGCCTGTTACTCCAGGTGTTTCTTGACTTCCTACTTTTGCATTCCAG TCONS_00062538 TCONS_00062539 . 5' 10800 TCONS_00062538 TCONS_00062539 . 5' 10800 EMBV3_12671 AACAAGGTCACCTTCTCAGAGCAGTGCTACTACGTCTTCGGGGACCTGTGCAGCAATCTT Gene GeneID:523325|DVL1:XM_002694185:651_cdna Constitutive 0 NULL GeneID:523325 16 GENE DVL1 NULL dishevelled, dsh homolog 1 (Drosophila) EMBV3_32749 CGGAGCGAAGAGGGAGGCTGTGTGGGCTAATTTGTCTTTGGTGTATCAAGCTCTTTGGTA Gene BVT0101_004747 - 1 EMBV3_08398 GK000010.2:38248607-38298318 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20168 GTTTTCCTCAGCTTTTTGTGATCCACACAGTGCAAGGCTTTAGCATGGTCAATGAAGCAG Gene BVV0102_061063 + 0 NULL GK000007.2:40870465-41100795 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220521 1 XLOC_133838 NonCoding TCONS_00220521 XLOC_133838 NonCoding NonCoding - 7:41096278-41097242 - TSS164519 964 2 TCONS_00220521_3 124 0.762448132780083 1 0 0 0 0 0 0 0 0 0 0 4.26814385161892e-06 0 7.0475205232363e-05 0 0 0 0 0 0 0 0 0 0 0.000180816373092451 0 0.000409671748565094 0 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 9e-179 630 79.81 0.721991701244813 1 noncoding 0 0 0 0 -0.0638750407194425 0.652671147129701 -0.0371595566636279 0.504668269933066 CTTGGATTACTGTGATATTGAATGGTTTGCCGTACAGAACCATACAAAAAAGGTCTTAATGACCCAGATAACCATGATGGTGTGATCACTCACCTAGAGCCAGACATGCTGGAGTGAGAAAACAAGTGGGCCATAAGAATCATCACTAGAACAAAGATAGTGGAGGTGATGGAATTCCAGCTAAGCTATTTAAAATGATGCTGTTAAAGTGCTGCAATCAATATGCCAGCAGATTGGGAAACTCAGCAATGACCACAGGACTTGGAAAGCTGTTTTCATTCCAATCCCAAAGAAGGGCAATGCCAAAGAATGTTCAAACTATCATACAGTTGTGTTCACTTCACATGCTGCCAAAGTAATGCCCAAAATCCTTCAGGGTAGACTTCAGCAGTATGTGAACCGAGAACTTCCAGATGTACAAACTGGGTTTAGAAAAGACAGAGGAACCACAGGTCAAACTGCCAACACCTGTATCATAGAAAAGGCAAGGGAATTTCAGAAAAACATATACATCTGCTTCATTGACCATGCTAAAGCCTTGCACTGTGTGGATCACAAAAAGCTGAGGAAACTTCTTATAGGCATGGGAATACCAGACCACTTTACCTATCATCTGAGAAGCTTATATGCATGCCAACAAGCAACAGTTAGAACCGGACATGGAACAACGGATGGTTCCAAAATTAGGAAAGGAGTATGTCAAAGCTGTATATTGTCACTCTATTTAACTTAAATGCAGAGTATGGGCAGTGGAGAGGCCAGGGCGCCCTCTGTCCTGGACAGCATATCGGCCCCAGGGTGGCCAGTGGCAGTAGTGACGGCAGGGAGCCGTCCACTCCTGGTCATCCTCCAACATCAGCTCGACTTCCCTGGAACCCCTTCCCCGTGACTCCAGCAGGGCCTCTGCCTCAGCCCCTGAGCAGCATGGTGATCAACATCCAACAGCTGGTGAAGGTTTACACAC TCONS_00216648 TCONS_00216649 TCONS_00216650 TCONS_00216651 TCONS_00216652 TCONS_00216653 TCONS_00216654 TCONS_00216655 TCONS_00216656 TCONS_00216657 . 3' 3506 TCONS_00216648 TCONS_00216649 TCONS_00216650 TCONS_00216651 TCONS_00216652 TCONS_00216653 TCONS_00216654 TCONS_00216655 TCONS_00216656 TCONS_00216657 . 3' 4469 EMBV3_12211 GTGTTCAGCAGTCGGGGTCAGGTGATCAAAGAGATACTGTACACGCCTTATGGAGATATC Gene GeneID:100336965|LOC100336965:XM_002699499:66_cdna UTR3_Alt 2 NULL GeneID:100336965 X GENE LOC100336965 NULL odz, odd Oz/ten-m homolog 1-like EMBV3_07129 CTTCGCACCTTTGCCAGAGTTTGAGCAGGAAGAGGATGATGGTGAGGTAACTGAGGACTC Gene GeneID:533296|TRIM33:XM_002686107:113_cdna Constitutive 0 NULL GeneID:533296 3 GENE TRIM33 NULL tripartite motif-containing 33 EMBV3_13895 CTCCCGGAGCTAAACTTTACCCTGCTGCAGTAGATACGATTGTTGCAATCATGGCAGAAG Gene GeneID:508412|MCTS1:NM_001046003:4_cdna Constitutive 0 NULL GeneID:508412 X GENE MCTS1 MGC137148 malignant T cell amplified sequence 1 EMBV3_33743 TGTTCAGGAATTTATTAAGCAAAGACTAGCGGAAGCTGACCTAGACCCCAGCGTCCCTCC Gene GeneID:512080|CDH18:NM_001076837:12_cdna Constitutive 1 NULL GeneID:512080 20 GENE CDH18 MGC143048 cadherin 18, type 2 EMBV3_22287 GAGGAGAGGTAAACCGTCGCAGTGCCAATAACTTCTACTCCATGATCCAGTCGGCCAACA Gene GeneID:100336550|LOC100336550:XM_002699542:37_cdna Constitutive 0 NULL GeneID:100336550 X GENE LOC100336550 NULL hypothetical protein LOC100336550 EMBV3_33552 TGGCAATTGGTGAAGTTTGAGAATCATGGCTGTGGTTTCTAATGTTCTGGTAATATGCTG Gene GeneID:537464|DOCK7:XM_002686354:31_cdna Constitutive 0 NULL GeneID:537464 3 GENE DOCK7 NULL dedicator of cytokinesis 7 EMBV3_25602 CGCGGCTGGAAAATGCCAGTCCATTCCCGAGGGGATAAGAAGGAGACGAACCATCACGAT Gene GeneID:514432|BRMS1L:NM_001083428:20_cdna UTR3_Alt 3 NULL GeneID:514432 21 GENE BRMS1L MGC143052 breast cancer metastasis-suppressor 1-like EMBV3_17855 CTTCTTTCCTTAATCAAGGTTGGTTGACCAATGGAATCTCTCAAGGCAATTCAAGCTTGG Gene GeneID:280737|BTC:NM_173896:5_cdna UTR3_Alt 2 NULL GeneID:280737 6 GENE BTC NULL betacellulin EMBV3_25808 GCAGCTTTATTCATCATCTCCGCAAACTGGAAGCAACCCAGTCATTCACCTGGCAAAGGG Gene GeneID:518818|LOC518818:XR_083895:51_cdna Constitutive 0 NULL GeneID:518818 17 PSEUDO LOC518818 NULL similar to FtsJ homolog 1 EMBV3_02557 CTGAGAGAAAAACGGTGGATGTGGAAGCCACGCAGCCGAACTCTCTCCCATTTAGGAAAC Gene BVV0102_132738 + 0 NULL GK000029.2:9997441-10186656 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163072 TCONS_00163060 TCONS_00163065 TCONS_00163080 TCONS_00163079 TCONS_00163076 TCONS_00163077 TCONS_00163073 TCONS_00163063 TCONS_00163067 TCONS_00163071 TCONS_00163062 TCONS_00163070 TCONS_00163061 TCONS_00163078 TCONS_00163069 TCONS_00164512 TCONS_00164510 TCONS_00163066 TCONS_00163075 TCONS_00163064 TCONS_00163074 TCONS_00163068 2 XLOC_099802 XLOC_100246 Coding TCONS_00163080 XLOC_099802 NonCoding Coding - 29:9997617-10004817 - TSS122297 1856 3 TCONS_00163080_3 51 2 0.742464231143214 0.00520142839230327 0.00356066374334397 0.00517719688447758 0.00501411306484704 0.00516195146994683 0.00184317718685305 0.00258581088043049 0.00239241359623994 0.00350296793582737 0.00101770653508396 7.63950313309451e-05 0.000139915298549465 0.000859622371114504 0.00376049955600059 0.0019471633330608 6.96075763980881e-41 0 9.27982307806384e-18 0.00324165228050896 0.00813118240042581 0.00105849231095742 3.20202318498192e-85 0 0 0.00266863743672086 0.00313421931370405 0.00296719194179703 7.48979777808186e-38 1.80430321531126e-18 4.33554978173686e-34 XM_003946237.1 LOC100862134 PREDICTED: Mus musculus disks large homolog 1-like (LOC100862134), 0.0 984 78.63 0.663254310344828 0 noncoding 1 0 1 0 -1.16599821087021 0.00786779667699398 -0.162492141425656 0.0253838219973402 CCGGCTTCTGCTATTTGTGAGCCTGGCTCCCTCGTTTTCGCATTCTGAGGGAAACGTGGGCCGGTCCTCGCACACGAATGTGGCTGCGCGTGTTCCTCTGCTCAGGACACCTCCGTTAGCTGTGGCCGAGCTGCCCGCCCCCTTTCACTTCTTCAGGGTGCTCGCCCCTCTGGCCCAGCCCGTGTGTTAAGGCTCCAGCTTCTCGGGCACCTCCTCCCTAGAGCCCCCAACCGGCCGCCGGAGCAGCCCCGAGTAGCCTCCTCCCCTTACAGCCGTCAGCGTCTCCTCTTCAGTCTCTAGTCCCCTCACATGCCATCCGTTTACCCCGCTTGGGAAGGGGCCGGAGAGAAATTTGCCCCTCCACTCCCCTAGAAGACCCCCCTTGCCAGCCGATGTTTCGAGGTGGGGGTGAAGGGGGCGCTGCGCCAAGGCCTGGCCCCTTTTGTGCACGTTCAGTGCCCGGCAGTGTCTCCCAGACCAGCAACCCCCGACCCTCCTGTCTCCGCGTCTTAGAGAAGCCAGAATCGCGAGTTATATAATTTCTAGTGTTGCTGTTTCTCCTGCCTGAGGAAACACTTCATCGCGTGGAGGGGTGCGGGACGTTTCTGTGCTCATCTCTAAGAACGGGGTGTGGGCAGAGGGGTGGCCGGCGGTAGCAGAGGGATTTCTGGTCTTTTCTGCGAAAGGAAGGTGGGTAGTTTGGAGAGAGAGACTGAGAGAAAAACGGTGGATGTGGAAGCCACGCAGCCGAACTCTCTCCCATTTAGGAAACCGCGAACCGTTTGCCCAGCTTATGCTCACATGCCTAATACTACAGCGTCTCAGAAAACACCTTTGGGGGAAGGTCTGACTTGTCTCGAGCAGTCTCAGTGTTTTTTCCTCGCCGGATAGGGAGCTGCCTGGATGCGAAGAGATGGCATGATTTGACTGACTCCAGTGTGAAGAAATCTTCGCCAACTCATCCTGCATCAAGTGCCCATTGAGTAGCACTGTCACTTTAATGTCTCCATGCCAAGGGATTGCTTTCCTTCTTTCCAATCCTCTCGGTTAATACATGGGAGGATCAGAATCAGAGGGGCATTAAGGATCAAGCCTGAGGGGCTTGGAGAGCACAGAAGAAAAAAAAAAAAGAAAGTGACAGCAAGCTGGATCCTGTCTCACTGAGGGGGTGAGATCCGGAACTTAGGGTCCAGTAAATAGAAAAGGGCCTTTCAGTCTGGGTTCTGCCCCCAGAAAACTGTCCAAACTCACCCCATCTATTTTAGAGACCATTAAAGAGGTTTTAAAAAGTATTTTGGAGAGGTGAGGGTTTAAAATTTTTCTCTAAAGAATTTGAGGGTCTTTATCATCAACCAGTTCATCTTTGATCATGTGTTGAGTAATGAGCCAGCTGTGTAAATTTGTTTTGTGCCTTAATTGAGTTAGTCATTGAACTCCAGAGATATTGCTGCCTAAAGAGGAGTTTTAATAATGTTTTCTATGCTTACAATAATTTTCTTTTTAAGCAGAATAACTATTTTAGAAGCATTGAAAAACTTGAAAAACTCAAAAGCTGTTTTTCTTTAAACTCCTTGGGCACTGTCAAAGTTTGTGGGAAAAAATACATCATTTTTTCTTTATTTGGAAGAGAAGACTGCCTGGATTTCAAACAACCAAGAGGTTTGCAACAGTTACCTGGCCCTTGGCCTCCATCCAGCTGGATCAAGTTGAGACCTGAAAAGAGCTCTTGAATCCTGTGGCATTGGAAAGACCCAAGAATGCCAGTCAAGAAGAAAGTTGCAGTGATGTGGGAGAAACCTAGACCTGGCTCAGAAGACCTGGCTTCCAGAAGAAGGGACAAGATTAGATAATCATTG TCONS_00164512 r 5' 0 TCONS_00164512 r 5' 5215 EMBV3_05491 GGAAAGGCGGGTGTAAGATCAAAGAGATCCGCGGCCAAGATCGGTGCAGCGACGCTGCGG Variant GeneID:509917|PCBP1:NM_001015565:35_cdna 391^606 1 EMBV3_05497 GeneID:509917 11 GENE PCBP1 MGC140822 hnRNP-E1 poly(rC) binding protein 1 EMBV3_02838 CAAATATCCCCTGGGGTATCTTGCTTTCTGCTGCAGAGAATCCAGAGAGAAAGTGGGAAC Gene BVV0102_302232 + 0 NULL GK000002.2:111251541-111264291 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103397 TCONS_00103398 TCONS_00103396 1 XLOC_062103 NonCoding TCONS_00103396 XLOC_062103 NonCoding NonCoding - 2:111250779-111253120 - TSS76784 396 1 TCONS_00103396_1 48 2 0.831623931623932 0 0 0.000327160402101672 0 0 0 0 0 8.58191507472038e-08 0.00152800659889026 0.000542331166223038 4.00894334570141e-14 0.000123175853396191 0 0 6.63179672990609e-07 0 2.65626390092688e-11 0 0.000217918444391431 0 9.45383419446361e-05 0 0 0 0 1.43548372526031e-09 0.000233456560179959 0.000668204284368907 0.00013486557029441 XM_005192269.1 LOC101903527 PREDICTED: Bos taurus one cut domain family member 3-like (LOC101903527), mRNA. 5e-38 161 100.00 0.222222222222222 XR_171351.2 LOC440934 PREDICTED: Homo sapiens uncharacterized LOC440934 (LOC440934), 7e-36 154 97.78 0.224747474747475 0 noncoding 0 0 0 0 CCGCCGTAGTGGTTGACGAAGATGAGGCCGGTGAAGAGCAGCACCACCATGGAGAGGAAGGAGAAGACAACGCACACGCAGCCGGCGGTTGGTCCTCACTCTATGAAGAGAAAACCTCCCCAGCCCCAACAGGGAAGGGAAAGGGGAGAGCTCTCTGGGTTCCCATGAGATGAGAATGTTCCCACTTTCTCTCTGGATTCTCTGCAGCAGAAAGCAAGATACCCCAGGGGATATTTGTGGAAAGGATGAATGAATGAGAATCAAGCTGAAGGAAGAGAGAAGCTGAAGGAAAGGAAGACACCAACAAACCACCAATGTACAGATCAAAGATGGAATTATCATAAATAACTATCAGGTTATTTCTCTGACACTTGAAAATAAATAGACCTTTTACTC TCONS_00106233 r 5' 21141 TCONS_00106233 r 5' 21141 EMBV3_06554 GAGTGGGTTGCCATTTCCTACTCCACTTTGACTCCTCTACTACCTTGGTTAATATCAGTG Gene GeneID:617491|MPV17L:NM_001046602:10_cdna Constitutive 0 NULL GeneID:617491 25 GENE MPV17L MGC137393 MPV17 mitochondrial membrane protein-like EMBV3_38286 TGGTCAACAACGCGGGCATCGCCTTCAAGAGCAGAGTGGTGAACGTCAGTAGTTCACAGG Variant GeneID:516036|CBR3:NM_001075734:54_cdna 444^551 1 EMBV3_01552 GeneID:516036 1 GENE CBR3 MGC142636 carbonyl reductase 3 EMBV3_34916 TGACACAGTATCTCCGTTTGGAACAGATCCTCTGCTATCTGCCATTTCTCCTGCAGTTTC Gene GeneID:539016|TFEC:NM_001083739:69_cdna Constitutive 0 NULL GeneID:539016 4 GENE TFEC MGC157225 transcription factor EC EMBV3_25921 AGTTCAAGTCTACCACAGCAGCAGGTCTGAGTGGGAAGAAGTTTCACCAATGCCAAGAGC Gene GeneID:524207|KBTBD3:XM_002692923:46_cdna Constitutive 0 NULL GeneID:524207 15 GENE KBTBD3 NULL kelch repeat and BTB (POZ) domain containing 3 EMBV3_27776 CATCCGTCTCCAAACTTAATGGCAGTGTTGTTACTGATGGTGAGCGAGAAGACTCCGAGA Gene GeneID:540781|TBCEL:XM_002693032:263_cdna UTR3_Alt 2 NULL GeneID:540781 15 GENE TBCEL LRRC35 tubulin folding cofactor E-like EMBV3_34266 GATCCCTTTATGAATCTTGTGATAGATGAATGTGTGGAGATGGCAACTAGTGGGCAACAG Gene GeneID:782782|LOC782782:XM_002686715:62_cdna Constitutive 0 NULL GeneID:782782 4 GENE LOC782782 NULL similar to small nuclear ribonucleoprotein polypeptide G EMBV3_05727 ACCAGTTGTTCCTGCTCTGCTTCTCCGCAGGTGGTGACCTTCGATGAGGGGGGCGTGAGT Variant GeneID:507080|PIGL:NM_001100311:475_cdna 249^439 2 EMBV3_02045 GeneID:507080 19 GENE PIGL NULL phosphatidylinositol glycan anchor biosynthesis, class L EMBV3_29350 AAATGTTGGAGAATGTCCACCGTTGGTCACGTGGCAGGAGGCCAGGGATCATCACATTAA Gene GeneID:535277|TPM4:NM_001101162:98_cdna Constitutive 2 NULL GeneID:535277 7 GENE TPM4 NULL tropomyosin 4 EMBV3_34313 CCCAGAAGTCACACCGCAGAGAACATCAGAGGACACATACAGGAGAGAGACCCTTTGTGT Gene GeneID:786874|ZNF568:XM_002694954:89_cdna UTR3_Alt 2 NULL GeneID:786874 18 GENE ZNF568 ZNF793 zinc finger protein 568 EMBV3_25174 GGGTGTGTGCCTGGATTGTCATAGGGTCTTATGTCTTTGGTTTCCTAGAAATCTCTGTGC Gene GeneID:784623|LOC784623:XM_002707864:109_cdna Constitutive 0 NULL GeneID:784623 15 GENE LOC784623 NULL similar to Olfactory receptor 5B12 (Olfactory receptor OR11-241) EMBV3_32848 ACATCAAGATCGAGCTGTGTGCTCAATTCCTCAAGACACTTGGAAGCCCTTTCGTGTGGC Gene BVT0102_286063 + 0 NULL GK000011.2:105549237-105563716 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029415 1 XLOC_015738 NonCoding TCONS_00029415 XLOC_015738 NonCoding NonCoding - 11:105557131-105558407 - TSS20458 1183 1 TCONS_00029415_1 79 0.437024513947591 2 0.0737254901960784 0 0 0 0 0 6.06309251486833e-17 0 4.99975892813866e-06 0 0.000167175331844106 5.62119203538458e-06 0.000145059547574497 3.88069334975318e-05 3.97632528851083e-06 1.70748797412291e-05 0.000163447707177757 0 0 1.8312305312864e-67 5.83832837719114e-25 0 0.00032355277802534 3.01176995384839e-05 0.000390570993708517 0 0 0 8.12330406723265e-05 9.59648142426028e-05 0.000668018495208801 XR_227230.1 LOC101907508 PREDICTED: Bos taurus uncharacterized LOC101907508 (LOC101907508), 0.0 677 100.00 0.31614539306847 0 noncoding 0 0 0 0 -0.0717051815413705 0.597082680924262 -0.0196669058573148 0.723600596985673 CATTTTATTAGACAAAAACCACCCTGCAAACATCTTTGAGAGGCTCCTCTGTGCTGTGAACATCAAGATCGAGCTGTGTGCTCAATTCCTCAAGACACTTGGAAGCCCTTTCGTGTGGCTCAAAGCGTCTGGGAGGGTCCGCTCCCCCAGGGATGTTTCAGCAATTTTAACAAAGGGTCGTATACCACGCCCTTGATTTCTTCTAACCCTGAAGTTGTGCTTTGCTGGCAGTGCCCTGGATTTAATCTTCCGCAGGATGCCATTTCTTACCTTGAGGACATTTGCTGCCTGGAAAGACTGGGATTGAGAAATCTTTTTATTCTCCAATTCATAAATGACTGAAGAAACCAGTTGGCCTCTGTCTGCCCTGTTACCACAGCCGGTGGTCTTCCACTTCCCCACCGATCCTGACCCAGCCCTGCCCTTCTCTGTCCTTCACCGGGGATGGAAGTCCTCACTGCCTGCCAGGTTCGCCTGCTGCCTGGCTCCAAAGAGCCACATTTCAGACTTTTGTGACTGGCAGCATCTCACTTCTAAGTGTCAGTGTCTGGTCCAGATACATGCTGCTGCATAATAAACAACCCCAAACCTCAGCGGCTTAAAACAGCTGTTGATTTTCTAATGATTCCATGGTAAGATCGGGTTCAGCTGGTTGACTCTCCTGCTGATGGCTGGTGTGCTGGTTTGTCTCAAACTGTCACCATCAATTCAATTCTTTCCCTCCCGTACCAATCCTATGATTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGAGGGGGTGGCTGTGACTCACAGCTTGTGGAATCTTAGCTCCCCAACCAGGGACTGAACCCCAGCCAGGGATCTCCCTCTTCTGACTGTTCTGACGCACATAAACTGGTAGAAAGTTCTTGGACTTCAGAGGCCAGGTCTGAGGCCTGACAGCTTCATCTTCCTCCCTCTCGGGGGCCTGCCTACAGGTAAACAGTCTCACTACCTGTAAATTCTCATTCTGTGCAGACCCTGAAGCAAATCATATGAGGAGGCCTCAGGGAAGGGGAACCTGACCAGCCCCCGCCATCCCAGCCACCCGGGTCAAAGTGTCAGACCAGCAAAAAGGTATCTAGGACATTCTAACGTGGGCAGACACCACCCAAAGTAGGAGAGCCTCTTGGCTGAACGCAACCGAGTTCTCAGTGTCTGAC TCONS_00026462 TCONS_00026463 r 5' 4316 TCONS_00026462 TCONS_00026463 r 5' 3894 EMBV3_20523 TCAGTGGGTTCAGCATCTCCCAGTCCAAGGAGAACCTGGATGCCCTCAATAGCTGCTACG Gene GeneID:505963|KCNQ2:XM_002692250:1533_cdna Constitutive 0 NULL GeneID:505963 13 GENE KCNQ2 NULL potassium voltage-gated channel, KQT-like subfamily, member 2 EMBV3_00485 AAGGATGGGAATGGCCTTGGAAAAGGTGGCACTAAGCATCACCGCAAGGTTCTTCGCGAT Gene GeneID:100336462|LOC100336462:XM_002695589:132_cdna Constitutive 0 NULL GeneID:100336462 19 GENE LOC100336462 NULL histone H4 replacement-like EMBV3_15089 CTGATTGAGGACTGCCAACTGGCACTGCAGGTGGAATTCCCAGAGGCCCGGATCTTTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09400 GCTGAGGAACTGCGCCCTGACCTCCGAGTGCTGTCAAGATATAGCATCTGCTCTTGATAA Gene GeneID:506161|NLRP8:XM_002695467:162_cdna Constitutive 0 NULL GeneID:506161 18 GENE NLRP8 NULL NLR family, pyrin domain containing 8 EMBV3_06102 CCAAGCCCCAGACACCCAGGGCCCATCAGCTTTTCTTTGTGGGTTTGTATTTCAGCTCTA Gene GeneID:534536|ACVRL1:NM_001083479:42_cdna Constitutive 0 NULL GeneID:534536 5 GENE ACVRL1 MGC139457 activin A receptor type II-like 1 EMBV3_39636 CCCGCCGCACCATGGAGTTCTCGGAGAGGAAGCGGAGCAGGAAATCCCAGAGCTTCAAAC Gene BVV0102_443188 + 1 EMBV3_31349 GK000013.2:28477491-28565186 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042392 TCONS_00044874 2 XLOC_025657 XLOC_026300 Coding TCONS_00044874 XLOC_026300 Coding Coding BEND7 13:28425607-28495849 j TSS32889 1168 1 TCONS_00044874_2 343 0.086472602739726 8 0.983485428738201 0.000333389078113219 0.00127868670735967 0.00182958670929006 4.53442719685841e-05 0.00134154999040876 0.00125642142078695 5.58571991121333e-05 0.000319023048334309 1.72451618373156e-08 3.56489018329404e-116 4.81466919503445e-05 0.000232660506118584 3.27259321975232e-115 0.000358273913942641 8.23027291767975e-05 2.21075785859323e-17 0 0 5.03475910268177e-09 4.73230269995399e-07 0.00129252471089663 0 2.35542111565563e-05 8.61019960109709e-05 3.14851988248907e-07 2.92240105424506e-87 0.000226677697065521 2.46593747218434e-05 0 0.000406643115443973 XM_005194304.1 BEND7 PREDICTED: Bos taurus BEN domain containing 7 (BEND7), transcript 0.0 1898 96.08 0.949486301369863 XM_005252402.1 BEND7 PREDICTED: Homo sapiens BEN domain containing 7 (BEND7), transcript 0.0 1249 87.50 0.85958904109589 TCONS_00044874_2 sp|Q8N7W2|BEND7_HUMAN BEND7_HUMAN BEN domain-containing protein 7; 0.0 590 88.86 0.988338192419825 1 coding 0 0 0 1 0.0571754524763882 0.700482810978569 -0.00362715537467348 0.938032053147066 CCAGTTTGAAGCTCTGGGATTTCCTGCTCCGCTTCCTCTCCGAGAACTCCATGGTGCGGCGGGCGGGCAGGGAGGGGGAGAAACTTAAAGAGGAACCCCAGGATTTGGATGCGATTTGGCCTCAGCGTTTGAACTCTGCAGAGGCCCCCCCAAGCCTCCACCCATCTTCCCGGGGCACGTGGAACGAGCTGCCACCCCAGAGCGGGCAGTTCTCAGGGCAGTATGGCACCCGCTCCAGAACCTTTCAGAGCCAGCCCCACACTGCTGGGAGCTCCAATGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCCAACTGCTGCACTTGTAACTGCCAGTCGACGTTGCAGGCCATCCTCCAAGAGCTCAAGACCATGCGGAAACTGATGCAGATTCAGGCAGTTGGAACCCAAAACAGACAACAACCCCCAATTTCCCTTATCTGCTCCCAGCGAACTGCCGTCTCACGCAAGAGAAATAAAAAGAAAAAAGTGCCCCCAAAGACTGTGGAACCTCTCACTGTGAAACAGAAGCCCAGTGCATTGGAAGCTGAGAAGAAGGCTGCAGGGGCCCCCGAGAATTCCAGTCTCCCCGTGGCCGAGCACGCCTCCCCTGGGGAGAGCCACATTCTAGGATTCGGCATCGTGCTTGAATCACCAGCCTCCGATCCAGAAGTGCAACTTGCTGAAGGCTTCGATGTGTTTATGCCTAAATCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCATTTTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAGGACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACAGAAAAATATTGCACTGCTAATCACGTGGATAAACTTCCTGGCCCAAGAGACTGGGTTCAGATTCTGCAGGATCAAATCAAACTGGCGAGAAGAAGGTTAAAAAGAGGCTCAGCAGAGGCAGTTGACGGTGATGAACGGCTGGACAGTGTTTCTCTAACCCCAACAGGTAAAAAAGCCTGAGGCCCAGAAACACTAAATGACTTTCTCAAGGTCTCACAGCTGGTTGGTGGCCTGGCCGGAGCCCAGGCCTCTCAACTCCCAGCCGG EMBV3_22352 TCGCTCCATCTTTGGAAATGCTGTTAGCCGATCGTCTGGTAGAGTCAGCTTCCTTAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27894 ATAGGACCAAACTGCCCAGTAACCTCCTCCACCTACATTCCCCGAAGAAAACAAAGCCTC Gene BVT0102_273537 + 0 NULL GK000003.2:116226450-116266171 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174852 TCONS_00174853 1 XLOC_104708 Coding TCONS_00174853 XLOC_104708 Coding Coding GBX2 3:116265297-116276048 j TSS129665 1772 1 TCONS_00174853_1 245 3 0.835441860465116 0.00231503986458473 0.0013016194266068 0.00161831919530407 0.000653209796962524 0.00116729744551516 0.000516034315059205 0.00053531189421264 0.000263336747778795 0.000753811216962983 0.000161590540144035 0.000215168567561079 0.000183655020442255 0.000338898762435352 0.00119066276592898 0.000635568464054032 0.000953905072976351 0.000112423154048096 2.83089061424728e-05 0.00127385082552721 0.00185332508781498 7.41538174846383e-08 0 6.21229197916331e-05 9.45513331736483e-06 0.00138510963004144 0.000664086763793496 0.000499501315867551 0.000374933204974457 7.12279204536904e-05 0.00053830179143534 NM_001192145.1 GBX2 Bos taurus gastrulation brain homeobox 2 (GBX2), mRNA. 0.0 1353 99.60 0.427200902934537 NM_010262.3 Gbx2 Mus musculus gastrulation brain homeobox 2 (Gbx2), mRNA. 0.0 1395 81.82 0.80079006772009 TCONS_00174853_1 sp|P52951|GBX2_HUMAN GBX2_HUMAN Homeobox protein GBX-2; 1e-171 481 97.55 0.995918367346939 1 coding 1 1 1 0 0.07852379453773 0.510337470025546 0.0536898762585551 0.41161202573594 CCCCATGAAAAATACTTTCATTTCCTGCAAAACGCAGAAATGTCTCCTAGGGAAGTGAGGGGGACAGCCTTCTGAAGTTTCCTGGGTTTTTCCCACCGGGTCTCAAAGAAGCATTCTCCTCTTCCCCTCCTCTTCCTGTCTGGTGTTCTCCTCCACGCTCATGGCCACGCTGCCAGGCGGCTTCTCGGCGTCCCCCCAGCACCAGGAGGCGGCCGCCGCCCGGAAGTTCGCGCCGCAGCAGCTGCCCGGCGGCGGCAGCAACTTCGACAAGCCGGAGGCGCTGCAAGCCGACGCGGAGGACGGCAAAGGCTTCTTGGCCAAGGAGGGCTCGCTGCTGGCCTTCTCCGCGGCCGAGGCTGTGCAGGCGTCGCTCGTCGGGGCTGTCAGAGGGCAAGGGAAAGACGAGTCAAAGGTGGAAGACGACCCGAAAGGCAAGGAGGAGAGCTTCTCGCTAGAGAGCGATCTGGACTACAGCTCGGATGACAATCTGACTGGCCAGGCGGCTCACAAGGAGGAGGACCCCGGCCACGCGCTGGAGGAAACCCCGCCGAGTGGCGGCGCCGCGGGCAGCACCACGTCCACGGGCAAGAACCGGCGGCGGCGGACTGCCTTCACCAGCGAGCAGCTCCTGGAGCTGGAGAAGGAGTTCCACTGCAAAAAGTACCTCTCGCTGACCGAGCGCTCGCAGATCGCGCATGCCCTCAAACTCAGCGAGGTGCAGGTGAAAATCTGGTTCCAGAACCGCCGGGCCAAGTGGAAACGGGTGAAGGCCGGCAATGCCAATTCCAAGACAGGGGAGCCCTCCAGGAACCCCAAGATCGTCGTCCCCATACCCGTCCACGTCAGCAGGTTCGCTATCAGAAGTCAGCATCAGCAGCTGGAGCAGGCCCGGCCCTGAGGGCCCAGGGCGAGCCTCGGCCTGGACCACCGTGGAGAAGCCACAGCTTCGGGGAGGGAACCCATGGTGGGCTCCACCATGTCTGAAGCAAAACTCAGAGTCACCCCCCAACTTTGGACATCCCAAGCAAATTGAGAGTATATCCATTAACGAGCTTGAAAGACTGCTTTTGAAGGAGCTACAGCTACACCTGGAAGACACACTAAATATTTATTATACTATCCTACTTTGTACATAGATATCTATATAGATTGGATCTCAGCTGCCGTATTTTGAAAGTTATAGGACCAAACTGCCCAGTAACCTCCTCCACCTACATTCCCCGAAGAAAACAAAGCCTCCACTGCAACTTGCCACGCACAGCAGCCACCTTTCCACACTTTTCCAAAGGTAAACATCATGTGCAAGAACAAACACGGTCACCACTTATTTTTGTTTCTGTTCTGGCTTTTTTAGTTGACTGAGAAGCAGACGTTTTGGGGGGGCAGCCTGGAAATTCGCTTTGCTTTGGTTTTTGCCTGGCTTTCTTTCCTGGGGTTGCATATCCTATGAGCCCTGTCTGAAGCACGTCTCCGTTGTGTTTAATTTATTTCAATGTAGTTTATTTTTCCTATAAGTTATGACATTAAAACAATCTCAGTCTTGTGAATAAAAAAAAAAAAAAAGGAGCAAGAAAGAGAGAAAAAAGACCAATTCTTGGGTCTCATAAGTATGTCCAGATTTGACTGTTTATAGAGGGACCCTCCTGCCCGCAGTGGCCGAGCAGCTGGTCTGAGACCAGCACCGCATAAACACCCCCTGTCCGGGGCCTCCTCAAGCTGGAAGGACCAGAGCCATCCAGCAGCAGCTCACCAGGTTTTAAATAGAGCAATAG EMBV3_29141 GGAGGAAACACCATCTTCTTTACGATGGCCTCGAAGCCTTGTGTCACCGAGTTTCCGTAA Gene GeneID:782637|LOC782637:XM_002690369:10_cdna Constitutive 0 NULL GeneID:782637 9 GENE LOC782637 NULL similar to predicted protein EMBV3_38702 TGACACAGACTCTATACCGAGTACCAACGATAGCAACCCTGTGATTTGTCCAAGTGCCAG Gene GeneID:100336745|LOC100336745:XM_002696327:75_cdna Constitutive 0 NULL GeneID:100336745 20 GENE LOC100336745 NULL hypothetical protein LOC100336745 EMBV3_01641 AAAGAGTACAGTTATTCACCCCAAAAGAACCAGTTTTCAGCCCTGGAGTGGGGGCTGGAG Gene GeneID:531649|TRAK1:NM_001077986:140_cdna Constitutive 0 NULL GeneID:531649 22 GENE TRAK1 MGC143371 trafficking protein, kinesin binding 1 EMBV3_29049 CAGTGAGGTCAAGTCACAGGGGTGGGCAGAGCATTCCACCTTGTGCTAAAGAAAAAACTC Gene GeneID:515675|RAB26:NM_001046209:186_cdna Constitutive 0 NULL GeneID:515675 25 GENE RAB26 MGC137742 RAB26, member RAS oncogene family EMBV3_38222 GTCCTACCCAGAGTTCTCCCTTACCTTCAGAGCTGGTTTGAGAGGAGCTGAAAGCAAACT Gene GeneID:531209|PLA2G4D:XM_002690807:28_cdna Constitutive 0 NULL GeneID:531209 10 GENE PLA2G4D NULL phospholipase A2, group IVD (cytosolic) EMBV3_16748 AAAGGGAACGGTTATCATCATCGCAAATCACGGTGACCGAATTGACATCCCACCTGGAGC Gene GeneID:281565|UGP2:NM_174212:14_cdna Constitutive 0 NULL GeneID:281565 11 GENE UGP2 MGC139678 UDP-glucose pyrophosphorylase 2 EMBV3_38150 TTTTCTTCAACATCTCAGGCATCATCCTGTGGTACCCAATCCCGTTCACTCGCCTGCCCA Gene GeneID:282484|SLC34A2:NM_174661:147_cdna Constitutive 0 NULL GeneID:282484 6 GENE SLC34A2 NULL solute carrier family 34 (sodium phosphate), member 2 EMBV3_20849 CAGAAGTTTTAACCTGGCACTGATATGGAGATGCAGCTAAGTTTAGGAAGACGTCCAATT Variant GeneID:616654|ASB17:NM_001076430:95_cdna 523^802 1 EMBV3_16101 GeneID:616654 3 GENE ASB17 MGC134010 ankyrin repeat and SOCS box-containing 17 EMBV3_04109 CTCCAGCTCCCGGAAGTCCAGCATGTGCAGCCTGGCGCAGCCCGCCCCTGCCGCCCGCCT Variant GeneID:521855|MTSS1L:XM_002694720:20_cdna 852^947 1 EMBV3_27960 GeneID:521855 18 GENE MTSS1L NULL metastasis suppressor 1-like EMBV3_03318 CTAGAATGGGCTATTTTGGGTGATTTCCTCAGGCTCTGGGGTCAAGGGGTTGTCCCATTT Gene BVV0102_182361 + 1 EMBV3_29970 GK000017.2:71619992-71637248 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06954 TTCTTTCCTTCATTTGCAAGACATTTTTCTGAAATGGGAAACAACCAAACTGTTGGATGA Gene GeneID:616566|SCARF1:XM_002695682:216_cdna Constitutive 0 NULL GeneID:616566 19 GENE SCARF1 NULL scavenger receptor class F, member 1 EMBV3_32750 AGCTGGGGGGCTGCACAGCCATCGTCCGCAACCTCGTCCATCACGGGCGATCTCTCAGAC Variant GeneID:539289|LMAN2L:NM_001014953:89_cdna 658^797 3 EMBV3_12838 GeneID:539289 11 GENE LMAN2L MGC129002 lectin, mannose-binding 2-like EMBV3_31122 GCTAGTCTACTTGGGAAAACAGCGTCTGATAGTAGGAAAAGCAGGGACCAAGAGGCCTTG Gene BVV0101_073308 + 0 NULL GK000013.2:10993501-10997992 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041881 TCONS_00041895 TCONS_00041909 TCONS_00041910 TCONS_00041894 TCONS_00041906 TCONS_00041901 TCONS_00041899 TCONS_00041907 TCONS_00041896 TCONS_00041908 1 XLOC_025557 Coding TCONS_00041910 XLOC_025557 NonCoding Coding LOC100337090 13:11078920-11082152 j TSS31309 1056 1 TCONS_00041910_1 134 0.600378787878788 3 0.674094707520891 0.00109279027375295 0.000530813372228762 0.0016256038682755 1.30083231524629e-05 0.000784335409487774 4.25136564444114e-15 1.92921047290519e-17 0.000195803343363275 3.67846402991978e-27 0 4.8102031449459e-05 0 4.76047988660267e-147 0 2.88534337171288e-321 1.32412569952069e-180 0 0 0.000884411743442636 0.000664588528183677 0.000793975354046534 0 0 0 0.00229951292015172 8.4069936771482e-05 0.00130505039677347 1.35927024699893e-118 0 1.51264968310999e-246 XM_005221819.1 C21H15orf40 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf40 (C21H15orf40), transcript variant X1, mRNA. 3e-103 379 87.42 0.291666666666667 0 noncoding 1 1 1 1 0.0742557507668083 0.572090875083021 0.0265872618539999 0.56939913367234 ACATTTTAGACTTGAAATAGAAAATGCCGAGTTACAAACTACAGTCAAAAAGCAAGTGGGCAAAATTGAACACTTTCAGAAAAACCTGTTAAGTACAAGACTGGCAAGCCGTTTGATTTCAGCTCCGGTGGCAAAGAGAACAATTCCAGAGTGAGGGAGCAGAATCTAGGCTGTAGCGAGGAGGAGTGAGGCTGGGCAGCTCCTTCAGGGTGTTTGGTTGTGGGTTGAGCACCTTTGAGGCTGCAGGTAAAGGGGGCAGCATAGTTGAGGGAGAGGTGTTTTGTGTTTGTTTTTTTTTTTTTAACTGAAGGACAATTGCTTTACAGTATTGTGTTGGTTTCTGCCAAACATCAGCATGAATCAGCCACAGGACAGAGGGCTTTTTTCTTTTTAACGATGGGAGCCATCCTGGTCAAAGCCTCTTGGTCCCTGCTTTTCCTACTATCAGACGCTGTTTTCCCAAGTAGACTAGCTTCCCTGTTAGCTCACTTGGTAAAGAATCCACCTGCAATGCAGGAGACCCTGGTTCGATTCCTGGGTCAGGAAGATCCACTGGAGAAGAGAGTGGCTACCCACTCCAGTATTCTTGGGGTTCCTTGGTGCTCAGCTGGTAAAGAATCTGCCTGTGTTGCGAGAGACCTAGGTTCTATCTCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAATATTCACACCTAGAGAATTCCATGGACTGTATAGTCCATGGCATAACAAAGAGTCAGACACGACTGAGTGACTATCACTTTCACTTTTCATGCTTTTCATAAATGGCCTTGAGGAAATTTCCTCAATTGAGGAAATTTCTATTTTATTGAAGTTTTTTTTTTTTTTATCATGAATGGGTTTTAAATTTTTTCAAGTGTTTTTTATGCATAGTCTTACTTTTAATTCTTACTTGAATGTTGGTAGAATTGAGCTTTGAAGCCATTTGGTCCTAAGCTTTTAACTTTTGGGATTTTTTTTTTTTTAATTAATATTTGAATCTCTTTATTTGTTACTGGAGTGTTGAGTTTTTCTATTTT EMBV3_40880 TGTGGTGTTATATGAAGGTACCAAGTCATGAGTCCCCTAGCACTCTTGTCCATTTGAAGA Gene GeneID:520730|WWC1:XM_002689365:22_cdna Constitutive 2 NULL GeneID:520730 7 GENE WWC1 NULL WW and C2 domain containing 1 EMBV3_08962 ACGGCCGGAAGCCACGCTGTATGATGCTCTGTAATATCACTATACGTTTGTCTAAGCCCC Gene BVV0102_174169 + 1 EMBV3_30413 GK000027.2:41883543-41930647 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21779 TGCGGTGAAAGGCAAAATTAACGTCACCTGCGAGGAGTTGCAGAGTGTTGGAAGATTTAA Gene GeneID:317651|CATHL6:NM_174832:67_cdna Constitutive 0 NULL GeneID:317651 22 GENE CATHL6 NULL cathelicidin 6 EMBV3_20211 GGTAAACTGCCTGCTATACCTGTTTTAGACATTTGGGCCCTGTCATTGGCTTATCTTGGT Gene BVT0102_257072 + 1 EMBV3_03077 GK000012.2:80157133-80236589 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22263 CCTGATTTTCATACCACAATCCCAGCATTTTGTTTGACTCCACCTTACAGTCCCTCTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28321 TTGCAAGACGGAGCTCTCTGGAAGAACGTGACAAAACCATATACCATCGTTGAAAAGAAG Variant GeneID:327665|NDUFB6:NM_175787:40_cdna 271^363 1 EMBV3_06234 GeneID:327665 8 GENE NDUFB6 B17 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa EMBV3_10850 AATTTGCATTTTTATTGAACCGTTGACTGTGTCTGTCCCATCATACTGCTTCCTTTCAGG Gene GeneID:767887|DIS3:XM_002691886:18_cdna Constitutive 0 NULL GeneID:767887 12 GENE DIS3 NULL DIS3 mitotic control homolog (S. cerevisiae) EMBV3_21002 AACAGGTTCCTGGAGCATGGTGAATATAAGGAAAACCTCTACGGAACCAGCCTGGAAGCC Gene BVV0102_316155 + 0 NULL GK000019.2:44312852-44326941 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097177 TCONS_00097179 TCONS_00097178 1 XLOC_058189 Coding TCONS_00097178 XLOC_058189 Coding Coding C19H17orf105 19:44309974-44319478 x TSS72066 1925 1 TCONS_00097178_2 322 0.237922077922078 8 0.798274229190782 0.001017642757116 0.000646659108988573 0.000330231842585922 3.89915203397148e-09 3.58254005648735e-05 2.51138120827846e-05 0.000202960545576358 6.1758725905366e-05 1.31563803091428e-09 8.78489948098476e-37 9.54024641650757e-10 3.08535290466708e-09 1.23436751916989e-09 1.99562145214701e-06 2.07059151597638e-09 2.26167997846297e-08 1.41141831596219e-08 2.28004647626162e-25 0.000334271946755491 0.000204095192708044 0.000206418501310559 3.4585484639423e-09 0 0 9.43698705232797e-05 0.000344588629230037 0.000133956809668075 8.63408696167114e-09 2.26247299275985e-09 0 NM_001100347.1 MPP7 Bos taurus membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) (MPP7), mRNA. 1e-21 109 68.40 0.149090909090909 NM_001932.4 MPP3 Homo sapiens membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) (MPP3), transcript variant 1, mRNA. 0.0 1615 81.92 0.855064935064935 TCONS_00097178_2 sp|Q13368|MPP3_HUMAN MPP3_HUMAN MAGUK p55 subfamily member 3; 3e-176 506 88.48 0.832298136645963 1 coding 0 0 0 1 -0.062028583500486 0.593967955280685 0.0218738983157375 0.65618211010573 CCGCTAATGAGAAACACACAGGAAGACTAATTAGAGCAAGTCTTGGTTAATAATGCACTGCAGCTCAGATCACAGGCTTGCTGGAGGAGAGAAAGAGGGGACAGATGGAGGGCTCCTGAGGACCCAAGGCTGTGGCTGCCTCTTGGTGGCAGGGCCTCCCGGTTCCCCTCTGCTAACCCTGCTCCATCTGTCTTTTGTGCAAACCGCAGACGATGAGCCCTGTGACAAAGAGTCCTGTGACTGTGAAGGGTATTTCAAAGGATACTATGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCCGTAGAGAGAGACTGGGAAGCCCACAGGAAGGAAAGACGTCTGCAGTGGCCGAGTCTCCGGAGCTGCCAACTTACGAGGAGGTGACCAGGTACCAGCACCAGCCTGGCGAGCGGCCCCGCCTGGTGGTTCTGATTGGGTCTCTGGGAGCCCGACTACACGAGCTGAAGCAGAAGGTGGTGGCAGAGAACCCTCAGCACTTTGGTGTTGCCATTCCACATACCACCAGGCCCCGGAAGAGCCATGAGAAGGAAGGAGTAGAGTATCACTTTGTCTCTAAGCAAACATTTGAGGCTGACTTGCATCACAACAAGTTCCTGGAGCATGGTGAATATAAGGAAAACCTCTACGGAACCAGCCTGGAAGCCATTCGGGTTGTGATGGCCAAAAACAAAGTTTGTTTGGTGGACGTGGAGCCAGATGCTCTGCAACAACTGAGGACCTCAGAGTTTAAACCCTATGTTATATTTGTAAAGCCTGCAGTTCAGGAAAAAAGGAAGACGCCACCCATGTCTCCAGCTTGTGAGGACGCAGCAGCCCCACTTGATGAGCAGCAGCAAGAGATGGCCGCCTCTGCCTCCTTCATAGACCAGCATTACGGGCACCTGGTGGATGCTGTACTGGTAAAGGAGGACCTCCAGAGTGCATACAGCCAGCTCAGAGCGCTCTTAGAGAGGCTGAGCAAGGACATTCACTGGGTACCTATTAGTTGGGTCAGGTAACTGTATCCTAGAACATCCAGGTTGGAGGGGACCTGGAAGACCACCTGGCCTGGCCTACCCCATGCTACTATCAAGGAATCTCAAGTGAGAGGGGCAGAATTTTCCATAAACTCCATCCTCAAGAAGAGTCTCTCTGGGAAGTCTTGTTTGTGATTGTTTTTTGTCCATTGCTTTTCACTGCACTCCTTTGGAGCAGAAAACATGAGTCAAAAGGGGGTATATATCACCATATAACACATGTCATTCATTAAAGTATCACAGGCAAGTTGACCCTGATTCTCTGTACCAAAGTTGAGTAGCCACTGTCTTTTGGCGGGGGAGGTGGTGGTGAATGTATGCAGTACCAATTTGCAGAGGTAATTTAAGCTTTATAAACAGACTGACACTTCATTTATCGGGCTTTGTCCAGAGTTGAGTTGTTTTACCCAAGAGGACTTAACGTGCAATTGAAGTTTGCCTGTCTTCAGGCACTAAAATGTTGATCTTTTTAAAGGTTTTGAAAGTTTGTGTTTGCCTGGCAATGGAAAATGTGGTTCTCTGCCGTCTTGAATAGTGAGCATTCACAAACTTTTTTGACAGACTAAGGTATGCTTCCCTGTCACCATGAGTTATTGTACTATCTATGATACGGTGGTGTTTTCAGGGACTCGTGGAATGTAAGGCTGCTTGTGCCTTTTCTATATATCCCCAGACTCCAAAACTTTACCCTTGCTTGCTTTGATTTATTCTGTTCTGTCACTTGTCTCTCTTGTTACTGACAGTTGCCCTGGTTCTCACCTGTCCCTTCCTTCAGATTATAGGAGCTCCTGACATGCCAGGTCATGGAAAAACAGATGATCCCCACACCTGCACCCCACACCCCCATCAAATCTATGTCTAAACCACAATAAATCAGTCCTGACCG TCONS_00094016 r 5' 1613 TCONS_00094016 r 3' 438 EMBV3_08211 CACTTTCGCTTACGAGAAGAGGCTCTCCCGGATCGAGACTCTACGCCTGGCCATTGTCTA Gene GeneID:538985|FERD3L:XM_002686703:175_cdna Constitutive 0 NULL GeneID:538985 4 GENE FERD3L NULL Fer3-like (Drosophila) EMBV3_33189 GCTCCATCTCCCAGCAAAATATCCGCTCCCAGACCTGAGGCAGGCCCTGAGAAGCCTCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08619 TTACGTCTGGGGTTCTGCACCAGGCACTGGCTGACGGGGTGAGAGCGATGTGCCTCTTGT Gene BVT0102_241600 + 0 NULL GK000005.2:116966531-117119384 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42585 TGTACGAGCTCACCGTGAAGCTGCTGTCGGAGCACGAGGACGTGCTGGCCGAGTTCAACA Gene GeneID:512589|FBXO2:NM_001075569:58_cdna Constitutive 0 NULL GeneID:512589 16 GENE FBXO2 MGC139756 F-box protein 2 EMBV3_09706 GTGACCGTGATCTTAGGCCTTATTTTTCTGAAGCAGCAGCCACACAGGGAACACTCACTG Gene BVV0101_022992 + 0 NULL GK000017.2:3963093-3991588 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42224 TCAGTCACTAACCCCCACTCCAGCTCCTGGGTTACTTGAGTTTGTCCAAAGTGGTGCCAT Variant GeneID:513252|BAT5:NM_001075605:99_cdna 163^286 1 EMBV3_04935 GeneID:513252 23 GENE BAT5 NULL HLA-B associated transcript 5 EMBV3_00617 GTCACGTCAACTGAGTCCTACAAGGAGACGCTGCACAAGACAATGGTGACCCGCTTCAAT Gene GeneID:505749|RBM10:XM_002700060:27_cdna Constitutive 3 NULL GeneID:505749 X GENE RBM10 NULL RNA binding motif protein 10 EMBV3_18017 ACCAACTACAAGAATCACGTGCGCATCCACACAGGGGAGAAGCCATACGTTTGCACGGTG Gene BVT0102_116748 - 0 NULL GK000023.2:9201735-9237763 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132217 TCONS_00132219 1 XLOC_080730 Coding TCONS_00132219 XLOC_080730 Coding Coding ZNF76 23:9225816-9236038 = TSS98966 2359 1 TCONS_00132219_4 519 11 0.770276880931416 0.00223086135619759 0.000736963751590406 0.00199822598874268 0.00160932838043219 0.000797242775130973 0.00137685856429782 0.000106727955473765 0.00133821512012031 0.00137193724726517 0.000445821176959939 3.37679574049969e-05 0.000229330405344029 0.000364975990393183 0.000215746723700292 0.00216950309975634 0.00105897429665041 2.02794230982729e-14 0.000588122390031491 0.0010401504478812 0.000529214976207929 0.000121127932408301 1.15813302228974e-08 1.40566615042303e-08 0.000189587358404741 0.00115805244614528 0.00111655267563915 0.000706916378008071 0.000213179479182674 3.72315157333903e-05 8.01985243316555e-10 XM_003583841.2 ZNF76 PREDICTED: Bos taurus zinc finger protein 76 (ZNF76), transcript 0.0 4044 100.00 0.949978804578211 XM_005249364.1 ZNF76 PREDICTED: Homo sapiens zinc finger protein 76 (ZNF76), transcript 0.0 2608 85.80 0.949130987706655 TCONS_00132219_4 sp|P36508|ZNF76_HUMAN ZNF76_HUMAN Zinc finger protein 76; 0.0 947 93.31 0.947976878612717 4 coding 0 1 1 1 -0.0334564555917074 0.778619243362746 -0.00145941232747406 0.983683164784772 CTGGTACCTCCATTGCTGCTTACGTCACCATTGAGACCATGCTGGAATTCATTTCCATGAAGAGCTACGACAAGATTCCAGATTCCTGGAAGGAACACTGTGTAATCATGTATCCCCAGGGCTATGACCCCAGTGCCCTGGAAGCCGTCCAGCTGGAAGATGGCTCCACCGCCTACATTCACCACCCCGTGGCTGTGCCGTCAGATGGCGCCATCCTGGCTGTGCAGACAGAGGTGGGCCTGGAGGGCCTGGCCGCAGAGGATGACGAGGGCTTCAGTGCGGACACAGTGGTGGCCCTGGAGCAGTATACCAGCAAGGTTCTGCATGAGAGCCAGGCTCCTCATAATGGCAAAGGACAACAGGTTGGGGACAGAGCATTCCGCTGCGGCTACAAGGGCTGTGGGCGTCTCTATACCACCGCGCATCACTTAAAGGTGCACGAGAGAGCTCATACCGGTGACCGTCCATACAGGTGTGATTTCCCCAGCTGCGGAAAGGCCTTTGCCACAGGATATGGGCTGAAGAGCCACATGCGCACCCACACTGGTGAGAAGCCATACAAGTGCCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCTCAGGAGACTTGCAGAAGCACGTCCGGACCCACACTGGTGAACGCCCCTTCCGGTGCCCCTTCGAGGGCTGTGGCCGCTCCTTCACTACATCTAACATCCGCAAGGTACATGTGCGCACCCACACAGGCGAGCGGCCCTACACCTGCCCCGAGCCCCACTGTGGCCGTGGCTTCACCAGCGCCACCAACTACAAGAATCACGTGCGCATCCACACAGGGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCGGGAAGCGCTTCACCGAGTACTCAAGCCTGTATAAGCACCACGTGGTGCACACACACTGCAAGCCCTACACCTGCAGCACCTGCGGCAAGACCTACCGGCAGACCTCCACCCTGGCCATGCACAAGCGCAGCGCCCACGGCGAGCTGGAGGCCACAGAGGAGAGCGAGCAGGCCCTTTACGAGCAGCAGCAGCTCGAGGCTGCATCTGCAGCCGAGGAGAGCCCGCCACCCAAGCGTCCCCACATTGCTTACGTGTCAGAGGTGAAGGAAGAGGGCGATGACCTCCCTACCCAAGTGGCTATGGTGACCGAGGAGGACGGGGCCCCCCAGGTGGCTCTGATCACTCAGGATGGTGCCCAGCAGGTCAGCCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGCGCCATCAGTATGGTGACCCAGCATGGCAGCACCACCCTCGCCATCCCCAGTCACGACGACACCCTCGCCACCTCTGGCGCCCACACAGTCGCCATGGTCAGCGCCGACGGCACCCAGACGCAGCCCGTCACGATCATCACCTCTGGGACTGTGGTGGCTGAGGACTCAAGTGTAGCATCCCTTCATCATCAACAGGTGGCACTGCTGGCCACAGCCAACGGAACCCACATTGCGGTGCAGCTGGAGGCGCAACAGACCTTGGAGGAGGCCATCAGCGTGGCCACTGCTGCCATGCAGCGGGGGGCAGCGACCCTGGAGACTGCAGAGTCGGAGAGCAGCTGCTGAGCCCGAGGGCTGCGTCCCACACCATGTTGGAGGATGTGCCAGGCTGCACAGGCATCCTTGCCTCCAAGGGCCCAGGCTGTGGCTGACGTGCAGGTGGCCACAAAAGTCTCTGGGGCAAGAAGGCAGCAGGAAAATGGCCTGAAGGGCACAGGAGCCCTGCCCCCAAGGAGGGCCAGGCAGCTGGAGTCGGGGGAGTGCGTCATCCTCAGGAGCTAAGGAGGACAAGTTTGATCAGCAGGCTGCACTGGGGTGTCCTCCCCCCAGAATCAGCTCAGCACCCTCTCTCTCTGGAAAACACCTGTCCTGGCCTCGGTCCATCCCCTTTCTCAGGTGGCGATTGGGGCTGCTCTGGGACTGGTCCTCTACTCCCAACTGGTCATTGCCCACTCTGGGAGCAGTCAGACAGCTCTTCCGCCCAGTAGGGGCAGAGTGGGCCCAGCCCTGCCCCTCCCAGCAATAAACACCTCCCCAGAGGCCAGTCGAGGTGTCTGGCCCCTTGGCAGTAGGGACTTTCTGCCACCACAGTCAGAGTTGCTCAGGGGCCCGTGGCTGGAGAAAGGTGCCCAGCCCCATGCCCACCCCAGCTGCTCCCCAGCCTCTCCACAGCTGTGGCAGAGAGGCCAGGAACAACCTTGTACATACTGGGGATTGGGTGTAATTTGTTTTATTTTTTTTAATTCCATTTTGATAATTTTTTTTCCTGCTCTGGATGGTGGTGGCAAATGGGTGAATGAGTATTTAATAAAAGTTCCAAGTTTCCA EMBV3_21917 CTAGACTACTACTTCGATTGCCAGCTTTGAGATTGATGAACGCTACCATCACCGAAGAAC Gene GeneID:511407|NR2C1:NM_001077904:31_cdna Constitutive 0 NULL GeneID:511407 5 GENE NR2C1 MGC151945 nuclear receptor subfamily 2, group C, member 1 EMBV3_28179 GGGGCAACCTGCTCTCCTCTATTTAGTACCTTGCACACTTATTACTGCCTCACTTGTTGC Gene GeneID:530325|LOC530325:XM_002690970:359_cdna Constitutive 0 NULL GeneID:530325 10 GENE LOC530325 NULL similar to signal peptide peptidase-like 2A EMBV3_37268 GTGCGACGACCTGTTTCGCTTCAACAACATAAAGGGTGGATTTTTTGTTGATCTCTTTGT Variant GeneID:540212|NAA20:XM_002692139:118_cdna 134^385 2 EMBV3_05256 GeneID:540212 13 GENE NAA20 NAT5 N(alpha)-acetyltransferase 20, NatB catalytic subunit EMBV3_00214 TTTCCTGTATGTGATCGCTCCATCCATCAGGAGCCCGAGTATACATTGCCTGTCGAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00319 AGGTTCTGGCGCCGCTGCCTATCCATGGAGGCACTGGAGATATTATTGCTGTCATGATTA Variant GeneID:525735|RNF130:NM_001099708:25_cdna 238^432 1 EMBV3_26935 GeneID:525735 7 GENE RNF130 NULL ring finger protein 130 EMBV3_22994 AGGACGCACTCGGAGGTGATGCAAAGTTACAGGTGATCGTGTGCGTGTCCCCAGGCCAGA Gene GeneID:616884|KIF25:XR_083765:20_cdna Constitutive 0 NULL GeneID:616884 9 PSEUDO KIF25 NULL similar to kinesin family member 25 EMBV3_31590 CTCTCACTCTCTATAGCCACCAGACTAAACCCTCCAAACCTCGGTATCAGTTGGGTCCCT Gene BVT0102_316262 + 0 NULL GK000010.2:18829593-18889066 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012890 TCONS_00012889 1 XLOC_007946 Coding TCONS_00012889 XLOC_007946 Coding Coding SENP8 10:18887032-18908054 j TSS9669 2195 1 TCONS_00012889_5 212 2 0.89567575281861 2.16963032601179e-19 7.20542891749483e-12 1.7051793722278e-16 1.0372911186702e-20 1.64396378522754e-27 0.000129034139347061 5.69226638083453e-48 1.55334608143718e-23 8.26949040760883e-05 0.000285526428661376 2.08142745515794e-05 0.000160553424773505 0.000170903450539602 0.00170601654044169 0.000685144556317221 7.31607055851549e-46 1.63948209531063e-12 0.00062232831109223 1.59706174610042e-14 6.88484821309316e-16 9.56985040538411e-20 1.3246993783723e-25 6.28798366357308e-30 3.54017635505368e-12 7.84701068666148e-14 2.85978339170974e-13 3.9410880117391e-14 0.000134731051615717 0.000370659447096663 1.35293860239749e-09 XM_590961.7 SENP8 PREDICTED: Bos taurus SUMO/sentrin specific peptidase family member 8 (SENP8), transcript variant X2, mRNA. 0.0 2628 100.00 0.663325740318907 XM_005254156.1 SENP8 PREDICTED: Homo sapiens SUMO/sentrin specific peptidase family member 8 (SENP8), transcript variant X1, mRNA. 0.0 1229 80.46 0.605466970387244 TCONS_00012889_5 sp|Q96LD8|SENP8_HUMAN SENP8_HUMAN Sentrin-specific protease 8; 2e-145 409 91.47 0.990566037735849 1 coding 0 0 0 0 -3.01599440679735 0.0100412424112617 0.011606546717367 0.854599344975293 TTTATTCATTAGTGATATGTGATTTAATCCTTACAAAAGTCCCCAAACTGTCAGGATCTGGATTACCTCACACGTTCTAGAAAAGAGACAAGATGAGAAGCAAGCTGTGTGATCTTACAATAGCACACACCCCCTGCCCTGGCTTTCCATGCTCTTCCCTCTCACTCTCTATAGCCACCAGACTAAACCCTCCAAACCTCGGTATCAGTTGGGTCCCTTAATCCCCACGGAGGGAATATACTAGGGTAACACCCCTTCAGGATTTCATGGCAAAGTCTTTCCAATCAAAGAAAGGATCACGAGCGGGGAGAAAGATACTAAGGTCTGCCTAAGGAGAAGAGGTCTGAGGGAGAGGCTACAGCAGGAGTCGGGGGAAGAAGCGGCAGTTGATGGTGGCTATAGAGGGGCTGATACCGGATCTCTTGGGAGCTTCTGGAATTTCTGAGCAGCCCTGGTCAGTACAAGATGGACCCAGTAGTCTTGAGTTACATGGACAGTCTACTGCGGCAATCAGACGTCTCACTACTGGATCCTCCAAGCTGGCTCAATGACCATGTTATTGGGTTTGCCTTTGAGTACTTTGCCAACAGCCAATTTCATGACTGCTCTGACCACGTCTGTTTCATCAGCCCCGAAGTTACTCAGTTCATCAAGTGCACTGGCAACCCAGCAGAAATCGCCATGTTCCTTGAACCCTTGGACCTCCCCAATAAGAGAGTCATATTTTTAGCCATCAATGATAATTCCAACCACACAGCTGGGGGGACCCACTGGAGCTTGTTGGTATATCTGCAAGATAAAAATGGCTTTTTTCATTATGATTCTTACGGTAGTAGTAACTCATTCCATGCAAAACAGGTAGCAGAGAAACTAGAGGCTTTCTTAGGCAGAAAAGGAAACAAACTGGCCTTTGTGGAAGAGAAAGCCCCTGCTCAACAAAACAGCTATGACTGTGGGATGTATGTGATCTGTAACACTGAGGCCTTGTGTCAGAACTTCTTTAGACAACAGCCACAATCACTACTGCAGCTACTCACTCCTACATACATCACAAAGAAGAGAGAAGAATGGAAAGATCTCATTGCCAGACTTGCTAAAAATTAGCTGTGGAAATATATTTGACTTTTGAAGTCTCTTTCTGCCTGTCCCCATGAATTGGATGGCTGCAGTCTCAGTGCCTGAGGGAAGATGCCTAGGAGAGGAAAGCTTAGAATGCTTACTTTCTCCTGAGAGAACGTTGTCCTCCACATTATCCTAATGCAAATTATCACTTTAACCCTAACTTCAGAGCAATATGTTCTGTGACGATGTCTTCAAAATATGCACCAAAACTGATTAATTCCCTTTTGGGCTCCCTTATCCACATTGGTTTAGTCCAAAGAAAAAAGGTTGACCTGTAAAACAAATTGAGAATATGTGAAATTTAGAAGCAAGAAGAAAATCATACAGCAACCAAAAACTTACTGCACAGCCCACATATTTCAAGAGATCAACTAGCTGGAAGCAGATCAAGACCTAACCTAATTCAAGATTGAAGTTTTATCAGTTACTCAATTCTGTGATACCTCCTCTTCCATTCAATAAGCAAAGGCTTTCCCAGCTATAACCTTTGCCAATACTTGATAAAGATGGTGTTAGCCCATAGTCACCCATCTAATTCCTGGAGCACTTTAAGAAAGGGGGAATCTTAAATAACTTTGTTAAAATTAATGCCTGTGGTGGACCTCTTGTTTTGCATCTGAAACTTAGTCAAAGTTCATTTATTTTTGAGATACAAAGGAGAAAAAGTGACCTTTCTTAACTCTTTCACTTAATTCAAAATGCAGACAGTGTAATTTTTGAAATGTGGAACCAAGAGTAAAATGAAATGCTGTTCCTTCCAAATTATGGATGTGTTTTTACAGTTATTTCAAATAACAATTTAAATGATATGTTATATACACATATTCTATTCTTAATGAGGATTAGATTGCAATGTATATGAGACTTGAAAGCTAAAGATTAGCTTCAACTGTGAAACTTATAATTTCAGCTACCTTCCTAGCCTAACCCTGCCCCCAGCCCTCATGGCTCAAAATAACCTCACCACTCAGTGACCACAGAGGCAATAGCCCAGTTCCTTTTAGTCAGGAAGGGAAAACCCAGTAAGTGTAAATAAGTACAGGTCACATAGCAGGCATAAGTTGAAACTAAAA EMBV3_19555 CAAGGTGCCCTTGAATGACAGACTGTTCCAAGAAAGCCTGAACTTGCAAACACAGGGAGA Gene BVV0102_101331 - 1 EMBV3_09183 GK000007.2:12426191-12442492 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33793 TAAACACCACATTCCCTTCCATCTCTGGGCTTTTTCTAACTCAGTCTGGACCTGTCCCCG Gene BVT0102_133639 + 0 NULL GK000011.2:29369289-29385560 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01841 CACAGTACTAAATAGTTTCTTGGGAGAGAGATGGCAGGTGCCTGAGGTCTATGTGTGCTC Gene GeneID:506921|SLC15A2:NM_001079582:35_cdna UTR3_Alt 1 NULL GeneID:506921 1 GENE SLC15A2 NULL solute carrier family 15 (H+/peptide transporter), member 2 EMBV3_21971 CATGTGCTTTCCATGGCTCTAGTTAGCCTGTCCCAGCTGAAGAAACCAAAGACCAGACAG Gene BVT0102_210790 + 0 NULL GK000028.2:41687365-41817914 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162658 1 XLOC_099539 NonCoding TCONS_00162658 XLOC_099539 NonCoding NonCoding - 28:41696953-41697999 - TSS121990 1046 2 TCONS_00162658_1 86 1 0 0.000793448638617634 3.84262241410144e-05 0.000601598408495181 5.55727053332543e-05 3.77604173627081e-05 6.83949340097586e-06 8.92039217190649e-05 9.04736931211741e-05 0 0 0 0 0 0 9.38089971807886e-06 0 0 0 3.42779082865109e-05 0.000261257488201732 0 0 0 0 9.93568348689512e-05 0.000107770090337063 0.000190450549162834 0 0 0 0 noncoding 0 0 0 0 -0.275252056552567 0.246672041809347 -0.0602249974824544 0.230127675280852 GGGGAGGGTCTTGTTCCTCCAGGAGTCTGGGTCTGATTCAAGCCAGTGGATGCGGAGCTGTAACAAAAGTGCCACGGGCTTTGGACAGACCTACTGCAGAATGTGATGCTGGGCAAGCTGCTCACCTGTCTGGTCTTTGGTTTCTTCAGCTGGGACAGGCTAACTAGAGCCATGGAAAGCACATGTGACGGGCGGGAGAGGGACCCACACAGGGTCTGCCAGTGGCTGGCTTCACTGGCTCTGTTCTATCACTTTGGTCCCCATTCTCATCACTGCACAGCCAAGGGCTCAGCCTATGTCCTCCCTTTTCCTAGGCAAAGTTGGGCCTCTCCCCAGAGCTCCAGGGCAGTTCTCAGGCTGGCTTAGGTATCTCCTCCGGCATGCTCAGTGAACTTGAGAAAATGAGACAGGGACTGAGACAGGAAGAGCCTTGTTTGGGGTGTTGACTTGATGTGTAGGGCAGAGGAGCCATGATCAGCCATCTGTTTCATAAAACGCACTCTGAGCAGGGTCGAGTGTGGGTGGAAGTGAGTTTAGCATCAGACTCCATTGCCAGGTCCTGCTCTGCTATCCACGGTAAAGTACTCCATCTCCCAAGCCTGTATTTCCTCGTTTAAAAAACAGGCATGTTGTGTACACCTGATGCTCTGGGGATGAGAATGAAGCACCCAGGACAGTGCTTGGTACACAAGAGGTGCCCTGCTCTGTCTCTTCAGAAGCGAGAACACAAGAGTTCTGAGATTAAAAGTCCATAGTATTAGGGAGCAATTTACAGCCGGCTGCAAGGGTGAAAAGTCTCGGATGGAGCTGGAGGAAGCAGTTGCTCGGCAGCGATGGGGAGCACAGAAGGGAGGGTGATAAGGAGTTTGGAGCACCTCCTGCGAAAGGAGGTGAGGCTCTGTCGGGGGCAAGGTGGCCATTTCCGCCCTGGCCCGGGCTCCCCTCCCAGGTGGGTCCTTAAGGGCGTCTTCCGGGGCGGGCCCTGGGCTTCGGCGCCCCCGCCCGGGCCGCCGGCTCTCTTCCGCAGGCCCGCCAGGGGGCGGCAC TCONS_00159720 . 3' 3604 TCONS_00159720 . 3' 4649 EMBV3_20976 GCTGATCTGCTGAGGTGTCAGGCCAAAATCGAGGATCTGGAGAAGTTACTGGTTGAGAAG Gene GeneID:540970|JAKMIP1:NM_001102251:31_cdna Constitutive 0 NULL GeneID:540970 6 GENE JAKMIP1 MGC166311 janus kinase and microtubule interacting protein 1 EMBV3_37629 TGCCTGGCCTGTATATTGGCAACTTCAAAGGGGGTTAAATACCTGTGCATTCCAGCAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00531 CCGGAGTCATTTTTCACCCAATTTGATGCTAAGGTGGTCTTCTGCTCCGTCAAAGAGGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02927 ATGGAGTACAGCCCTTGACTCACTCAGCCCCAATCACTCCAGTTCCATCTACGACAGCAT Gene GeneID:539246|LOC539246:XM_002686049:262_cdna Constitutive 2 NULL GeneID:539246 3 GENE LOC539246 NULL similar to C1orf51 protein EMBV3_18217 GTGCTCTGGTCCAAACTTTTAGGTGGTAATGTTAAACCAGTTGGACTGCAGGTTTTTGGC Gene BVV0102_227802 + 0 NULL GK000006.2:92136499-92149806 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205760 TCONS_00205763 TCONS_00205766 TCONS_00205761 TCONS_00205770 TCONS_00205762 TCONS_00205767 TCONS_00205768 TCONS_00205765 TCONS_00205769 TCONS_00205764 TCONS_00205771 1 XLOC_124744 Coding TCONS_00205768 XLOC_124744 Coding Coding CDKL2 6:92148148-92194136 j TSS153578 4301 1 TCONS_00205768_4 569 14 0.906778002478961 0.00205246654814691 0.00222417924049261 0.0027945509244493 0.00323216257691618 0.000864240147640464 0.00070593360089042 0.00249399172718436 0.000952924978402739 0.000955760052352683 0.000164022422826569 1.79220681485083e-12 5.48348393827618e-09 0.000466614326603259 8.72071026783144e-07 2.48911342975621e-18 1.57877394459626e-10 4.18274401788715e-37 2.81562914402785e-08 2.21214692846335e-06 0.000754339443761344 1.41504030803653e-16 4.24965969983331e-15 1.29499146115568e-14 1.48819404314995e-14 0.000238073540156437 5.23135826760585e-07 8.42386309086035e-08 2.17808701047654e-13 1.94969594510751e-35 2.28083756945232e-35 XM_005208096.1 CDKL2 PREDICTED: Bos taurus cyclin-dependent kinase-like 2 (CDC2-related kinase) (CDKL2), transcript variant X1, mRNA. 0.0 4533 100.00 0.584050220878865 XM_005263335.1 CDKL2 PREDICTED: Homo sapiens cyclin-dependent kinase-like 2 (CDC2-related kinase) (CDKL2), transcript variant X1, mRNA. 0.0 2973 83.91 0.632876075331318 TCONS_00205768_4 sp|Q9QUK0|CDKL2_MOUSE CDKL2_MOUSE Cyclin-dependent kinase-like 2; 0.0 987 83.89 0.998242530755712 2 coding 1 1 1 1 -0.15778443356106 0.196152908911895 0.00378570809069506 0.950781751478774 CACTGACTACAAGGACCAAGCATCTTAAGAGCTGCGGGGCGGTGCCCTCTCACCTTAGCTAATTTCCGTACAGGCCTTGGCCTTAACAGGTGTTGGTGCCTGCCGTGGACGCATTTCGACCCCGGCCGTATCTCTCTCTGGAGACTTTGTGCCTATGGTTGGGGACAGAGTGAGGTCGTTGCCTTGACGACGACAGCATGCGGCCCGCGGTTCTCCTGAGTGTAAGCTTGCGGCGGGTTGAGGCCAATCTGCCTACCTGCCTGCTTCACCTGGGACCCGTGACTGCGTCCGCAGAAGAAATAAAGACAGCTGTGGAATTGCTAGTTTGCTAGTTAGCATCTTTTAGACCTGCGAAGAAGATGCTCTTCACCTCAATTTTGTCTCCAAGTTGAAAACCTTTGGGACTTTCCACGCGGAAAGATTTAAAACAAACAAGAGAAAAATTCCTGGTGGTTTTGAATTAAAATGGAAAAATATGAGAACCTAGGATTGGTTGGAGAAGGGAGCTATGGAATGGTGATGAAGTGTAGGAATAAAGATAGTGGAAGAATTGTGGCCATCAAGAAGTTCTTAGAAAGTGATGATGATAAAATGGTTAAAAAAATTGCCATGCGAGAAATCAAGTTACTAAAGCAACTAAGGCATGAAAATCTGGTGAATTTGTTGGAAGTATGTAAGAAAAAAAAGCGATGGTACCTAGTCTTTGAATTTGTTGACCATACGGTTCTTGATGACCTGGAGCTCTCTCCAAATGGACTAGACTACCAACTAGTTCAAAAGTATTTGTTTCAGGTTATCAGTGGGATTGGATTTTGTCACAGTCACAATATTATTCACAGAGATATTAAGCCAGAGAACATATTAGTCTCCCAGTCCGGCGTTGTCAAGCTATGTGATTTTGGATTTGCACGGACACTGGCAGCTCCTGGGGAGGTGTATACTGATTATGTGGCAACACGATGGTATAGAGCTCCAGAGCTGTTGGTTGGTGATGTCAAGTATGGCAAGGCTGTTGATGTGTGGGCCATCGGCTGTCTGGTAACTGAAATGCTCATGGGGGAGCCCCTCTTTCCTGGAGATTCTGATATTGATCAGTTATATCATATTATGGTGTGTTTAGGGAATCTAATTCCAAGACATCAGGAGCTGTTTTATAAAAATCCTGTGTTTGCTGGAGTAAGGTTGCCTGAAATCAAAGAAACTGTACCTCTGGAAAGACGCTATCCCAAACTCTCTGAAGTTGTGATTGATTTAGCAAAGAAATGCTTACATATTGACCCAGACAAAAGGCCCTTCTGTGCTGAGCTCCTGCACCATGATTTCTTCCATATGGATGGATTTGCTGAGAGGTTTCCTCAGGAACTGCAGTTAAAAGTACAGAAAGATGTCAGAAACATTTCTTTATCTAAAAAATCTCAAATCAGAAAGAAGGAAAAGGAAAAGGATGAGTCCTTGGGTGAAGAGAGAAAAACACTTGTGGTACAGGATACCAATGCTGATCCCCAAACTAAGGATTCTAAAGTATTTAAAATAAAAGGATCAAAAACAGATGGAGAAAAAGTGGAAAAAGCGAGTCGAGCTTCAAATGCCAGCTGTCTCAATGACAATGGGATGAGCCCTGTCAAAATAGTGCCTTCAACAAGCCTCCGAGATTGCAGCAATGGCAGCGTGGACCAAACAAGAAATCCAGGCATGGCAATTCCCCCACTCACACACAATCTTTCTGCAACAGCTCCCACTATTACTTCTGGAATGGGAACTATCTCAGGAATTCAGAGTTACAGAGTGGATGAGAAAACCAAGAAGTATTGTATTCCATTTGTTAAACCAAATAAACATTCTCCACCAGGAGCTTATAATATTAATGTGACCACATTGGTTGCTAGTGAAAAGAGCCTACTTCAGGCAAATAAGAAAAGAAGGGAATACTCAAAGACAGATGTCCGTTTGCCTGAACTAAATTATAATCATCTCCCTGAACTAAAAGCCCTGGAAGGCATCGCTCGGAATTCCAGGCTAATAAAGAAAGAGAACAAAAATCTTTCAGAATCTCGAATTCCGTCTCTGGCCACAATTGACTTGCACACTCCCAGTATCGCATTACAGCAGGTATCAAAATCTCCCCTGTCAGATGATTCAGAGGCTGATTTGCCTCCCGTGGAACACCAGCACTGAGTGGCCTGTCGATTCTGAACTGGATGCTGCTATGGTACCTGAGAGAACATTCTTGTGCAACAGAATTCTAGGAGCAGAGATTCATGGCTTTGAGCATTGACTTCTGAACTGCCTGCATTTTCTAAGAAAAGCCTTACAGCAGAAGAAAAGACATCATCCATGTGTTTCACAGGAAGATTGAATAACTGTTATCCCCTCACATTTCAAGTCCGTTGATGCTATTTCAAGATGTATCAAATGAAAGCATAGTGATAGGGTTCTTGTTATATGAATGTGTATTTACTATTAGTAGATTGTGTATTTAAAGTGAGTAAAAATAAAAGAGAAGCATTTAAAAGGTTTTGTTGTTTATGCATTGAATCTTGTTTGCTATCTATATAAATGTGTACATTTATTTGGAAGTGAGTTCAGTGGAGGTAGATGATCAAAACTAGGATCAATTGAAGAAAATGAAAAAAAAAAAAAAAAGATAAAAAAGATTTTGTTTCCTTTACCCAAACTTAATTATAAAACAAATTTAAAAATCTTGCTTGTTTCTATGCTTTAAGGAGAAAAGTAACTACTCTCTATGGATAGAAGTGTATCTTTGGTTTCTGTGATTATTGTTAATGTTTGATCAGTGTTATTATGGGAATTTTGGCCTCTGCTGATCTTCTAAGAACCACACTAAAGCAAATTTTGCAAAGAAACCATTATTTCTAATAACTTAGTGTGATTCTGGCATTGGACAGTCCTCTGTTTTGTAAGATTCTAGTGCTAATGTTCCTGTGTGTAGGAATGTGATTGAAATGAATGGTGAAGAAGAATTTCGTTAAGTTTATCTTGGAGCTGAGTACTGTGCTTCTCATTTGAAAAAAAACAGAGGTAACCATACAGAGTTTCAGGACTGAAACTTCGTTATACCAGTTGACTCAGGCTGATTACTCTTATCTGGCTCAGTGTCTATGAAACTCCCCAGTTGGAAATGCTTTAGGGAGGGAATGTCGACTGTGAGGACTTCTCTCTTGTCCCACTGATAGTTTGAAGGTGACATTAGACAGAACCTAGAGATGTTCCTCTCTCCTTGTTTCCTCAAATACTTAGGCCTTCCCCAAAACTTTTTATCAAGGTGCAAAATCATTTACCATCAGCGCATACATCTTTTCTAGTGCTCTGGTCCAAACTTTTAGGTGGTAATGTTAAACCAGTTGGACTGCAGGTTTTTGGTTTCTGGGTTGTAAGTCATGCTCTGCATTTAGAGAATGGTTTTTAAGGGGACCAGAATTTGTGTGGACACTTTTTTTTTGCCTTAACCTATTAACAACATATTGTTTTTTTCCAAAAGGCATTGGCTAGAATGCCTCCCAAATTTAACTAGCACTTTTCTCTATTACTCTAAAGAGCTTAATATTGAAATTCTGACCTTAGACACTTGGGCTTCAAAAGAATAGGACATTTCAGAGGAGGCAAAATAAGAGGCTCCAATGTGGAGTCTATTGGTAGTTCAGCTAAAATTTGGTCTTGATTCTGAGGTTCTATCTTTAACCTCTGATCAAGTATTTGACTAGATTGTTATGGCTAACATGCTGAAGAAAATTTGTGTATAAGTACATTAAAATATTATTTTATTTTTACTTTTAAAAATATTGCCAAGAGACTCTACAGCATGGAAAGCAGATGATACTTAAAAAGCCAAGTGTTTCGCTAGTTTATTTCTATGTTATTTTAATTTATAGATCAGTGTGAAAATATCATCTCAGTGTCTAAGGATCTAAGATCAATAACCTTCTCATTTCTATATTTGCTTTTGGGCATTTTTTTGTTTATTAAAACATATTGTGAACTTCAGAGTTAAGGAACTAAAAATGATTTACTGTAAGTCCAGGTTGAGACTTGAGGATCTTATCTGGTTAGAACTTGCAGAACTACTTGAAAAAGAAGATTTTGCAAATTGGGGCCATAGATACTGAACCAAAATAATCCCTCTTTTCAGTTTGAGGTTACTTTTAACTTTTTCTCACCTACAAGGATATGATTAAGCCACTTACTAATAGAAAATATATGTATGTACTGGTGGGGGAAATGGGCTTGCTGTGTGTATGTATGTTTTAAAATTAATAAATATTATATCTTACTGAGCTCCATAT EMBV3_23231 GACCTGTGCCAGAACAGTCTCTCCTCCTCTTCATAACTTTCCTGACTTTCTTAATGCCTG Gene BVV0101_041191 - 1 EMBV3_01174 GK000001.2:115296207-115476360 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23911 CAGATTCAGAGGCCGCTACAGAAGTCCTTACAGACGACGTTCTCGAAGCAAAAGTCCGTT Variant GeneID:508722|RBM39:XM_002692451:478_cdna 651^716 4 EMBV3_20884 GeneID:508722 13 GENE RBM39 NULL RNA binding motif protein 39 EMBV3_25565 GAAGGGCAGGTGGGCGACGGGCCTGTGGACCAGGCGAACTCCCAGGTCGTCATGCCCCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05417 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43456 GAATCCGGAATCCCCACGGCAATCAGAACGACAGTTGACAGACCGAAGGACTGGTACAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39541 GGCGCCTCTTTGACCCCATCTCCCCTTAGAGATGAGAAACATGTTCAGAAGGAAACCATG Gene GeneID:539231|LOC539231:XR_084603:622_cdna Constitutive 0 NULL GeneID:539231 18 PSEUDO LOC539231 NULL similar to kinesin family member C3 EMBV3_31257 TCCCAGCCTTATTACTAACTCTCTGAAGGCCCCTACAAGTGGCTTTCGTGGAAGGATCAC Gene GeneID:100337386|LOC100337386:XM_002686787:125_cdna Constitutive 0 NULL GeneID:100337386 4 GENE LOC100337386 NULL hypothetical protein LOC100337386 EMBV3_01352 CAGACTGGATGTGCCTTTATCCTCTAATGCCCCAATCTCTCTCTGAACACCCCCATTCTC Gene GeneID:618127|FXR2:XM_002695834:223_cdna Constitutive 0 NULL GeneID:618127 19 GENE FXR2 NULL fragile X mental retardation, autosomal homolog 2 EMBV3_34647 AGAGGAGACCACATGTCCCTTGTGCAAGAGAACCCGCTCTGGGGGCCTGGAGAGGCTGTA Gene GeneID:767879|LOC767879:XM_002697884:452_cdna Constitutive 0 NULL GeneID:767879 25 GENE LOC767879 NULL hypothetical protein LOC767879 EMBV3_11806 TCAGAGGTACATTCTGCACGCTTCTCAAATGGGCTTGTTTTGACAGTGTTTTGACCCCAC Gene BVV0102_011326 + 0 NULL GK000014.2:56790170-56852964 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41961 GGTCGTCACGGACAAGCACTTCTACTTCAATGCCACCAAGGGCTTCCCCTGCCTTAAGAA Gene GeneID:540893|HS3ST6:XM_002697920:559_cdna Constitutive 0 NULL GeneID:540893 25 GENE HS3ST6 NULL similar to heparan sulfate (glucosamine) 3-O-sulfotransferase 6 EMBV3_39970 CTCTACCCTTCTGTGGCTCTAACCAGTTGAATCACTTCTTCTGTGACATACCTCCAGTGC Gene GeneID:614452|LOC614452:XM_002693633:183_cdna Constitutive 0 NULL GeneID:614452 15 GENE LOC614452 NULL similar to olfactory receptor 1112 EMBV3_17531 CAGCCCCGCACGCACCTTGATGTTAGCCTTACTCGCTTCCGACTTCCAACCTCCAGAACT Gene BVV0102_052890 + 0 NULL GK000018.2:52522727-52549298 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083974 TCONS_00083972 TCONS_00083973 1 XLOC_051414 NonCoding TCONS_00083972 XLOC_051414 NonCoding NonCoding ZNF235 18:52526381-52559052 x TSS62993 2360 1 TCONS_00083972_1 142 0.625847457627119 4 0.927884909703092 0.0112337936035829 0.00609837247234719 0.0084495207743578 0.00319059849970367 0.00544785956681701 0.00296380351428106 0.00226202516557205 0.00468069767214389 0.00125606820553712 6.58833070015115e-05 4.27030731201901e-05 5.42798225870026e-49 6.79101252376393e-05 0.000574825775039555 0.000238272471508739 7.30195341094194e-33 0 0 0.00407446533776513 0.00836204716831253 0.00140623587658972 3.77510280943074e-22 4.24584804399168e-31 2.26670510283582e-31 0.00605033190699746 0.00368624967787098 0.00438033052125689 2.97470529357572e-41 7.11815087586439e-29 0 XR_228534.1 LOC101909441 PREDICTED: Bos taurus uncharacterized LOC101909441 (LOC101909441), 0.0 764 100.00 0.178813559322034 XR_247634.1 LOC101928510 PREDICTED: Homo sapiens uncharacterized LOC101928510 (LOC101928510), misc_RNA. 1e-16 93.3 80.81 0.039406779661017 0 noncoding CCTCAAAGTTATGATCGCATGTCAGCAGGAGCTTTCCCCTTTTCTGTGTGTCTGTCCTCTACCCTTTGTGGTTGACTGAGATCGTGCCCCCTAAAGATGTCCTGACCCCCAAGAACCTGTACATATGTTCCCTTATGTGGCAAGAGGGACTTTGCAGGTGTAATTAATGTCTGGAGATGGGGAGAGGAGCTCGGATGATCCAGGTGGGCCCAATGTAATCACGAGCGTCTTAGAAGAGGCGGGCCGGCTGTCAGAAAATAGCAGGCACCTGGCTTTAAAGATGGCGGAAGGGACCGCGCGCATCGTCAAGCTGGAAGAGGTGAGAGACGGAGCTTTCCACAGAGCCGCCACGAAGACCCAGCCCTGCACGCACCTTGATGTTAGCCTTACTCGCTTCCGACTTCCAACCTCCAGAACTCTCTGTCTTCTCGTGACTCTGCCCTTCCCCACAGGAAGGAGAAAACAACCAAGTTCCAGGAAGAAGAAAAGCAGCCCTCATGCCCCTTCAGAAAGGGCCTCACCAAGTGTGCTTATCCACTGCCCCTTCGGGGAAACTAGAAGAGCCGCCTCGTCGACCCAGCTGCAAGATCTGTGACTTCTATAAATGTCACGTTTGAAATGTAGAAAACGTCACTGAGGCCAAGTGATTGTTTAAGCACCAGAGAGGGGCAGAGAGGGTGAGGTGACTGCCTGCCTGGCTGGGAATATGGACTCCACACAGAAAAAAACTGCTAAAACCAGTAAGTGAATTCAGCAAAGCAGCAGGGTATAATGTTAACATACAAAGATTCGGTTGCATTTCTAGCCACTGTAGAAAACAGTAGGGAGGTTTCTCAGAAAACTGAAAATGGAATTACCATGTGTGTCAGCAACCCCACTCCTGGGCATATATTCAGCCAAAACGAAAATTCAAAAAGATACAGGCACCCCTGTATTTACAGCAGCACACAGCCATCGACAGATGAACGGATGAAGGAGATGTGGGGTGAGCACGTACACAGAATAGAATACTGATCAGCCGTAAAAAGAACGAAGTAATGCCACTTGCAGCAACGTGGCTGCAACGAGATTATCACACTAAGTGAAGTAAGAGAAAGACAAATACCACACGATGTCATTTATGTGGACATCTGAAATCCGACACAAATGCACTTATCTATGAACCAGAAACATGGACATAGAGGACAGAGTGGCGGCTGTGAAGGGACATGGGGGGACGGAGGGATGAACTGAGAGTCCAGGGTCAGGAGATAAAGCTTTTATATACAGCATGGATAAACAAGGTCCTACTATATAGCACAGGGAACTGTATTTAATATCCTGTGATAAACCAAAATGGAAAAGAATTATGTAGAAAAGAATGTGTGCATGTATATCTCAATCACTTTGTTTACAACAGAAAATCAACATTGTGACTCAACTATACTGCAATTAAAAAAAACCCAAATTAGTTGCATTTCTATCCTCAATGAACAATTTGAAAACAAAGAAAAAAATTCCATTTATAATACCGTCAAAAAGAATAAAATACTTAGGAATGAACCAAGGAGGTGAAAGGCTTGTACACTGAAAGCTACAAAACGCTGGTCCACAGATGGGGAGATTTAATACTGCTTCACCAGTGCTACCCAGAGGGATCTACAGATTCAACGCTATGCTTGTCAAAATCCCAACACAGAAATAGGAAAATTCATCTGAAAACTCATACAGAATCCAGGGACTCTGCTGGTGGTCCAGTGGTTAAGACCCTCTGCTTCCACTGCAGGGAGCTCGGGTTCCATCCCCACATGCTGCACAGCGCAGCCAAAAAATCAAACAAACATGAATTAAGAGTAAAAGGAGCGGCCAGGGAAGGCCGTGGGTGAGACACCTTCTGAGCAGAGGATAAGGGGTCGGAGGTCTGTGGGCTAGCAGCCTTCCGGCCAGAGGAAAAAGAGGAAACGATCCTCGTGTACAAACACAAACCTCGGATGTGAGAACAGAGGACATGGGAGGGGATGTGACAGGAGGGAAGTGCAGGACGGCACGGCTGGGCGAGGGGGCCCTTAAACACAGCGGCCTTTTCCTAGTGGAGTGGATGCTGGGGGCGGTGCGGGAGGACCGGAGCGCCAGACTGTGCGGTGACTGAGCTCTTCAAAGGGCCGCTCTGGCTGCCGCATGGAGAAGACACAGATGCTCCAGACAGACGCCGGGGAACGGCCCGACCGCGCTGTTCTCACCTGAACACCCTCCTCTCTGGGGCTGGATCTCTGTCATCCAGAACTCCTCTCTCTCCAACTCAGATATCATGTCTGGCTTGGAGGACTGGTGCCCTGAGAAAAAAAAGGTGGGGGGGGGGGGAAGTACTGAACAATTCTGGT TCONS_00086788 r 5' 0 TCONS_00083967 TCONS_00083971 s 3' 3656 EMBV3_18685 CAAAAACAGGTTCTGAGTCTTCTGGTAGTGTAGGGTCATCCACGGGCTCGCTCTCACACA Gene GeneID:533850|R3HDM1:XM_002685413:17_cdna Constitutive 1 NULL GeneID:533850 2 GENE R3HDM1 NULL R3H domain containing 1 EMBV3_29617 GCCCTTGCACAGGCTGATAGACTGATTGCTCAGTATCGCTGTCAAAGAACTCAAGCTGAG Gene GeneID:538580|LOC538580:NM_001103284:104_cdna Constitutive 0 NULL GeneID:538580 1 GENE LOC538580 MGC140451 p90 autoantigen=like EMBV3_01615 AGACTGCCTGAGACACACTCCTCACAGGTTTGACTCTGCTATTCCGAGAAGGTTCTGCAG Gene GeneID:534159|C10H15orf44:NM_001015652:203_cdna Constitutive 0 NULL GeneID:534159 10 GENE C10H15orf44 C15orf44 DKFZp564O1664 MGC137691 chromosome 15 open reading frame 44 ortholog EMBV3_41376 AAGTGACACATCCAGGGTGTGTGTACATCTGAGGTCGGTTAATATCCCGTCTGGCTTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38260 GCTTGGGAAACAGAAGATGCTCACTTCTGCCCTAATCAGTTGGCCCCAGTTTAGCAAAGA Gene BVT0102_275527 - 1 EMBV3_32204 GK000010.2:38298832-38300764 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016912 TCONS_00016916 TCONS_00016911 TCONS_00016917 TCONS_00016918 TCONS_00016914 TCONS_00016910 TCONS_00016915 TCONS_00016913 1 XLOC_008934 Coding TCONS_00016910 XLOC_008934 Coding Coding UBR1 10:38298985-38328438 j TSS11699 3184 1 TCONS_00016910_2 106 7 0.892129566752682 6.9577649958035e-10 2.74742772028852e-10 0.000201993203461283 7.45531082228758e-05 4.20645823678361e-29 2.32042565838596e-25 1.94132085844747e-16 3.53302142559972e-05 3.07449387527052e-49 3.52481471737153e-05 0.000150883784530077 1.29604063075263e-74 3.12718246206824e-06 1.68554009052995e-64 5.37853714756292e-51 0.00332040330360096 0.00221611572364053 0.00118184081150011 1.57483473934932e-23 1.92876775673176e-05 1.83567449356306e-05 0.000622929152741398 0.00117479350007621 0.00300432703541759 1.07020277718364e-20 9.72332670221669e-29 9.2556517397888e-05 0.000204819649108858 3.44878290169204e-05 0.00035180557488106 NM_001205897.1 UBR1 Bos taurus ubiquitin protein ligase E3 component n-recognin 1 (UBR1), mRNA. 0.0 2502 100.00 0.435301507537688 NM_174916.2 UBR1 Homo sapiens ubiquitin protein ligase E3 component n-recognin 1 (UBR1), mRNA. 0.0 2922 80.53 0.992462311557789 TCONS_00016910_2 sp|Q8IWV7|UBR1_HUMAN UBR1_HUMAN E3 ubiquitin-protein ligase UBR1; 4e-69 228 99.06 0.990566037735849 0 coding 0 0 0 0 -0.00535849149283652 0.971184563498214 0.0414127171745224 0.412301436248573 CCCTGGTGTGGGTAAAAGATGCTGCAGAAGGAGAATACAATGTACTCTGTAGCTATTTATCTTTACCCACAAATTTGTTCCTGCTTTTCCAGAAATACTGGGATACTGTGAGGCCCCTCCTCCAGAGGTGGTGTACAGACCCTGCCTTACTAAACTGTTTGAAGCAAAAAAGCACTGTAGTCAGGTACCCTAGAAAAAGAAATAGTTTGATAGAGCTTCCTGATGACTATAGCTGCCTCCTAAATCAAGCTTCTCATTTCAGGTGCCCACGGTCTGCAGATGACGAGCGAAAGCACCCTGTCCTCTGTCTTTTCTGCGGAGCCATACTATGTTCTCAGAACATTTGCTGCCAAGAAATGGTGAATGGGGAAGAGGTGGGAGCTTGCATTTTTCATGCACTTCACTGTGGTGCTGGAGTCTGCATTTTCCTAAAAATCAGAGAGTGTAGAGTGGTCCTGGTTGAAGGTAAAGCCAGAGGCTGTGCCTATCCAGCCCCTTATTTAGATGAATATGGAGAAACAGATCCTGGCCTGAAGAGGGGCAACCCCCTTCATTTATCTCGTGAGCGGTATCGGAAACTCCATTTGGTGTGGCAACAGCACTGCATCATAGAAGAGATTGCCAGGAGCCAGGAAACTAATCAGATGTTATTTGGATTCAACTGGCAGTTACTGTGAGCTCCACCTCCACCTGGGAACAATCACGAATAAAGACAGGAATGAAGACTGATTCAAAATTATGGAGACCTTGCTGAAAGCTGGAAGGGTTAGAGGGTCTTTTGCTCCATGTCCAGATTCACATACGTCAATAAAATATTCCTTAATGGAGTATTTCTTTCAATTAGCAAACATGTTTAAAAGGGAAAAAAAAAAAAACAACATAGATTAATCTGGTTTATGTTCCAGAACACTAAAGAATTGCTTCTTCACCCCAAGTGTCTGATTCTGCTAATAGTTCCAGAAAACTCATTTCCCTTCATCATCTGTCCCATTTCACTCCATCCATCTGAAAAGTGAAGTCACATCAAGCAGTTGGCGAGCATTCTTATATATTAACTCTTCTACAATTTGGTTTTTCCCCCAAAATTTGGTTTAGCTAATGGATCACAGACAAGATTTTAATGATATGTGATAGTCTCCCTTGCAGCTAAAGAGGAATTCAGAAACCATGTGGTATACTTCAGTTGAGAAAGTTTTCTAAAAAGTAAACCTTTTATTAATATGTCTCTCTTAAGGAAATGCCCCTCATGTTACACTTACTGTTTCAGCCAAAAATTAAATTTCTCTATGGAGTTTCCATTTCTACGGCAAATTTCTGCTGGTATGGAAATGCTTTCTTTCCTTGAGGTCAAGTTTCTGTAGACCTCAAGAAGAGTTAGGATAGTGTATTCATTATTTATCCCTGATGTGACAAAGCCTGCAATCCTCACCTCTGATGGTGAGGATTAGCTTTGTTGGGTTTTGAAATTATACTTTCATTTTACAAAGGCAAGTTTCTAAAATGAGTTCACTTATCTCTTGATTGTGGCACCACTGTATTTAATTCAGAAACCTATTGCAGTTCTGTTTAAACTATCTATAGAGGGTAAAAAAATTCCCCCAATGAGTGGAGCATTGGATATAAATTAGAACAATCAGATTTAAGCCTGTTCTGTAACCTTCTAATGTCTTTGTAAGACAGATCCTTCATTTGTTATCTGTGTGCAAACTTTTCATAAACTCTGGGTAGATGATGCATACAACCAACCAAAAAAGCCATGTGATCAGTGGTCTGTGTCCTGTTATATATAACATGCTGTGGTTGAGCCATCTTGTTTATAAATAACAGAGCTCTCCTGAATCTGTGCATAGACTTCTTGGCTTTAACTTTTTATATCAAGAACTTGGAATATAAAACAGAAGGCAGAAGAGAAATTGAGATCTTATATTTTAGCTTCTGTTGTCTCTGGGATAAAGTTAGAAGTTTGAAAGATGCATTCAAAGACTATCTTATTTTGCCTTTGGTGACCATGGTCATATGTATTTAGATGTTTTCCTACCTTCTTTTTGCTCAGCAAAAGCAAGCAAGTAAAAATGTATTTGCAAATTGATGATACACATTTGGGGTTAGGTTTTTTGGTATCTTTATGTAGCATAAGAAAGTCTGGATTTTTCAATAAGGGATTGGTATGAACAAGTATCAGAATCACAATCATGATTTTCTACTTGAATAATTATCATTCAGAAAATATCAGGAAATATTAATAGATATAACTCTAGTGAACAATTTATTAACTAGTGGTGGGTGAGGATTAGAAATTTCAATATTCAGTTTGTCAAATTTACCAGTATGATTAAATGATTACATTTCCCTTTATTTCTTATATAATTTGTTGGATGGATTGTCTGGAAAGGTTTGAGCCATTTGCTTGGGAAACAGAAGATGCTCACTTCTGCCCTAATCAGTTGGCCCCAGTTTAGCAAAGATAAATTGCTTTTTCATTTCTAGCCTTTTCCTATCCACTTCATAAATCCTAGAGTTAGGCTCTCAAGCTGCCAGAGGGACTATCCTACAGTGGCCAGTCAGATCTTTACTGCCAAAGAACCCATTTCCTGTTGAGTTCCATTTCCTGAGGTTGACTCAGATTTTTGCACTGTAGATGAACTTATGTTCTCAGTGCTGCCCCCAGCCCAAGGGATTTCTAATTATGTTCAAATATCCTCGTTGTCTGCCTTCATCATTGTAAACAATTTAAAAGCTTATGAACTTTAAAAATGAGCAAAAAGTCACTTTATTTTCTATAGTGTATTATGTGGAGGAACTGGTTCAACAGATTGGCTCCAAGACTGCGTTTTTCTAATGTTTGGTGAGGGGCTGGCAGGAATTTTAATGATGCAGTGAAGAAGAACATATATCTGTATAATTAATTTATTATGTTGGTGTATGGGCTGTGAGGTCACCCTTTAGTGGTCATTTGTCATTTCGTAACAACTATGAATTTTGGTTCACTGTGATGATCATCTATATTTAGTGACTGCAACTTGTTTATACCACTGATTCAAATTCCATCCATGATGAAGTTATACAAATAATGCATATATTGATATCTTTTATTGCAAAATGTAAATTTAAAACTTGTATAATGTTCTGTGCTTTTTGAAATAAAATATCTTATATGTGTATATTTAAAAAGAAAGAAAGGGAC EMBV3_23591 AGACGATGTCTCTGTCCGCATCTTCCAGTACAACCACAGGTTTGCCATATACGGAGAGGA Gene GeneID:522769|LOC522769:XM_002692641:134_cdna Constitutive 0 NULL GeneID:522769 14 GENE LOC522769 NULL similar to N-6 adenine-specific DNA methyltransferase 2 (putative) EMBV3_29624 TGTGCCCCAAACTGGGCTGAGCCGGGGACCCCATTTAGCTCTCCTTGGAGACCCCAGTGA Gene GeneID:541260|VGLL2:NM_001078032:34_cdna Constitutive 0 NULL GeneID:541260 9 GENE VGLL2 MGC155226 vestigial like 2 (Drosophila) EMBV3_26221 TGCTGGATTCGCTTCGATGGGTCTCCTTTTCATCTATGGCTGTCTTCCTGAGACCAAAGG Gene GeneID:613556|SLC2A13:XM_002687367:62_cdna Constitutive 0 NULL GeneID:613556 5 GENE SLC2A13 NULL solute carrier family 2 (facilitated glucose transporter), member 13 EMBV3_15960 GGGACGATCATCCTGGGGACCTGGTACATGATAATGCCTGTGTTCTTTTTGCCGTCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34483 AGTGTGCAAGCCACTGCATTACACCAACATCATGACACCAAGAGTGTGTGCCTGGATGGT Gene GeneID:100301403|LOC100301403:XM_002693800:121_cdna Constitutive 0 NULL GeneID:100301403 15 GENE LOC100301403 NULL similar to olfactory receptor 154 EMBV3_31970 GGGTTCTCATAATAACCTTTTCTTTCCGGTTAAGACTGGAGCTGTCAAGGTGGTAAGCAT Gene GeneID:540760|RFXAP:XM_002691750:271_cdna Constitutive 2 NULL GeneID:540760 12 GENE RFXAP NULL regulatory factor X-associated protein EMBV3_19457 CCATCATCAAAGGTGGACCTGGGGACGAGTGGATGCAGGAGCTCGATGAATTGTTTGGAA Gene GeneID:540588|MAML3:XR_083891:154_cdna Constitutive 0 NULL GeneID:540588 17 PSEUDO MAML3 NULL similar to KIAA1816 protein EMBV3_35646 CTTTCTCTTCCATCCCTCTGCACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCC Gene GeneID:532919|NRBP1:NM_001076889:168_cdna Constitutive 0 NULL GeneID:532919 11 GENE NRBP1 MGC139974 nuclear receptor binding protein 1 EMBV3_11735 TGCTCGTGTGAACGGAGGGACCGATGAAGAAAATGGCGAGGAACTGGCGCAGGTTAATAA Gene GeneID:100297854|LOC100297854:XM_002697540:301_cdna Constitutive 0 NULL GeneID:100297854 23 GENE LOC100297854 NULL similar to doublecortin-like kinase 1 EMBV3_29919 TCGTCAACGATGAGCTGTTTGTGCGGAATGCCAGTGCTGATGAGATCCAGAGAGCCTTTG Gene GeneID:512136|NXF1:NM_001075555:73_cdna Constitutive 0 NULL GeneID:512136 29 GENE NXF1 NULL nuclear RNA export factor 1 EMBV3_19943 GTCATGATTCCCTGCTTGCTGATCCTATGTTCCTACACTTGCATTGCTGCTGCCATCCTG Gene GeneID:790683|LOC790683:XM_002693137:33_cdna Constitutive 0 NULL GeneID:790683 15 GENE LOC790683 NULL similar to Olfactory receptor 10A5 (HP3) (Olfactory receptor-like protein JCG6) (Olfactory receptor 11-403) (OR11-403) EMBV3_23765 GAGACATGATCTATGACCCCAGTTGGCACCATCCGCCTCCACTGATACCCCATTATTCCA Gene GeneID:506999|COPR5:NM_001098894:218_cdna Constitutive 0 NULL GeneID:506999 19 GENE COPR5 C19H17ORF79 MGC152319 cooperator of PRMT5 EMBV3_28367 CGGGAGGGCCGACGGCCTCGCGCTGTGAAGGATAGCCAAGAGAAAAATGGATGAGCAGAG Variant GeneID:505408|C4H7orf64:NM_001101854:24_cdna 124^314 1 EMBV3_36889 GeneID:505408 4 GENE C4H7orf64 MGC148329 chromosome 7 open reading frame 64 ortholog EMBV3_37172 TCAGTGAGGGAGACAAATCCTGACACTGAAACGGAAGCAAGTATCCTCGGAGAGAGTGGG Gene GeneID:516595|PTRH2:NM_001034519:27_cdna Constitutive 0 NULL GeneID:516595 19 GENE PTRH2 BIT1 MGC128626 peptidyl-tRNA hydrolase 2 EMBV3_43031 TGGTGTTATAGCAACCGTAGCCTTCTTAATGTGCTCGCATTTGGCTGTTCATTGGTTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28644 AAGCGATCTGAGGCTGCACTTGGGCTCAGTGGGAACAAGGATGGATTAGCTACAGTGTTT Gene BVT0102_257054 + 0 NULL GK000018.2:8932274-9189534 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10282 AAGCCTGTGGAGCAATTCATCTTACCCGAGACTGGGGAGGGTGCCTTGCCTCATGAATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36703 GGATTGGTGGAAGTAGCATCCATTACTGTGAACATATCTGATTCTGAACCATCACCCCCC Gene GeneID:517697|SUHW2:NM_001077935:61_cdna Constitutive 0 NULL GeneID:517697 17 GENE SUHW2 NULL suppressor of hairy wing homolog 2 EMBV3_26700 GGCGAGCGCCGTTCCGAAGGGACGGGCGATGGGGAGAGGGTGTAAATCTCGCGCCGGGCC Variant GeneID:100336997|LOC100336997:XM_002685421:9_cdna 278^542 3 EMBV3_15785 GeneID:100336997 2 GENE LOC100336997 NULL hypothetical protein LOC100336997 EMBV3_30997 AGTCCGCCTCCGGGCAGAGGACGGAAGCCATTTATCTGAATAGGGGCTCAGCAACCTCCA Gene BVV0102_176689 + 0 NULL GK000017.2:73416057-73425745 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11330 AGAGCTCAGGGAGGCCTTCAGAGAATTTGACAAGGACAAAGATGGCTACATCAACTGCCG Gene GeneID:281653|CABP1:NM_174254:9_cdna Constitutive 0 NULL GeneID:281653 17 GENE CABP1 MGC148706 calcium binding protein 1 EMBV3_36860 TCTGGCACCAGACTAAAAATTTCTAACCTTTTAAGTGAATGGTATGTTCAATTTCATGTG Gene GeneID:768210|RELL1:NM_001078098:44_cdna Constitutive 2 NULL GeneID:768210 6 GENE RELL1 MGC143350 RELT-like 1 EMBV3_27114 TTATGGATAAAGCAGCTGGGCCATTTGAAGCATGATGGCGTGGGAAGCGTGGGGAAAGGT Gene BVT0101_002752 - 0 NULL GK000010.2:68351880-68778346 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00021866 1 XLOC_012539 NonCoding TCONS_00021866 XLOC_012539 NonCoding NonCoding - 10:68560372-68560644 - TSS15756 272 0.922794117647059 1 0 0 0.000554141483187047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.90910990226872e-05 0 0 0 0 0 0.000382083994394311 0 0 0 0 0 XM_005217757.1 FICD PREDICTED: Bos taurus FIC domain containing (FICD), transcript 3e-06 55.4 74.73 0.330882352941176 0 noncoding CTCTGTCTTAGCCATACTTGTTACCCAACCAAGTTTGTTTTGCCCTATGCACAGCAAGCCAAGATACTGAGACCCCAGAGGTTTAACAGAAAAGAGAGGGTTCAGTGACAAGGCAGCCAAGAGAGGAGACAAGACTCAGTTCAGCTTCCTCAAAGGCAATGGGCATGGGGTTTTTATGGATAAAGCAGCTGGGCCATTTGAAGCATGATGGTGTGGGAAGCGTGGGGAAAGGTGATTGGAAAAATGTGCAGTAATCACCGTTCTGTGCAGCT TCONS_00014450 TCONS_00014451 TCONS_00014452 TCONS_00014453 TCONS_00014455 TCONS_00014459 TCONS_00014460 TCONS_00014461 TCONS_00014462 TCONS_00014463 TCONS_00014465 TCONS_00014466 TCONS_00014468 TCONS_00014469 TCONS_00014470 TCONS_00014471 TCONS_00014472 TCONS_00014473 TCONS_00014474 TCONS_00014475 . 3' 208494 TCONS_00014450 TCONS_00014451 TCONS_00014452 TCONS_00014453 TCONS_00014455 TCONS_00014459 TCONS_00014460 TCONS_00014461 TCONS_00014462 TCONS_00014463 TCONS_00014465 TCONS_00014466 TCONS_00014468 TCONS_00014469 TCONS_00014470 TCONS_00014471 TCONS_00014472 TCONS_00014473 TCONS_00014474 TCONS_00014475 . 3' 208765 EMBV3_12523 ATGGTCAGGTCTGGATCTCGACCGGGCCAGGACCAATTGGAGAAAGATACCCCGTTTTAA Variant GeneID:786080|CCDC14:NM_001101298:113_cdna 134^189 1 EMBV3_39007 GeneID:786080 1 GENE CCDC14 NULL coiled-coil domain containing 14 EMBV3_32718 GGGAGCCTTCACCACCTTCCTCATGAACCTCAGCACTTGTCTGGACGTGATTCTCTACTA Gene GeneID:540038|GPR18:NM_001034689:29_cdna Constitutive 0 NULL GeneID:540038 12 GENE GPR18 MGC127585 G protein-coupled receptor 18 EMBV3_08125 CGTCTGGCTTATCGATGTTGCTGTTTGATACAATTCTGACCAGGGAAACCATGGGATGCC Gene GeneID:614734|LOC614734:XM_002697719:37_cdna Constitutive 1 NULL GeneID:614734 24 GENE LOC614734 NULL similar to Transmembrane protein C18orf45 homolog EMBV3_01490 TCAGGGATCATGTCTGACACTCATTTCTATCCTCCATTCTGCCTAGGACAGCACTTCTCT Gene GeneID:511195|CYP39A1:NM_001098938:261_cdna UTR3_Alt 2 NULL GeneID:511195 23 GENE CYP39A1 MGC160008 cytochrome P450, family 39, subfamily A, polypeptide 1 EMBV3_19677 TTTGGGAGAACGGAAGGACACCCGCGGCCTACTCTAGACACCTCTTCTCAGATTCACTGC Gene BVT0102_296533 + 0 NULL GK000006.2:5340823-5344437 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24484 GCCTGGGATTCGTGACTTTGGCTCTGGGAATTGCTATCACAATCGGAGCTTTTAACAACG Gene BVV0102_095490 + 0 NULL GK000025.2:10526558-10576474 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146233 TCONS_00146234 1 XLOC_089057 Coding TCONS_00146234 XLOC_089057 Coding Coding LOC100848402 25:10554018-10556347 = TSS109393 523 1 TCONS_00146234_1 115 2 0.776202749140893 0.0115857958879371 0.00486955151860026 0.00817485081021939 0.004210201587309 0.00235058920611564 0.00231325429502512 0.00370864413827589 0.00299071826779697 0.00220308293375435 0 0 0 8.75788898224366e-10 0.000314786148133302 0.000741087314485786 0 0 0 0.00575737005406284 0.00399167868150188 0.000796024924962499 0 0 0 0.00676752664647374 0.00698556089314591 0.0068969651814735 0 0 0 0 coding 1 1 1 1 0.175002800428835 0.219508658106968 -0.264186501771436 0.00461411734684958 CGAAGGTTACGCCAGTTAGGTTGGAAAGCCTGCTAGCTGATTTCTTTAAACTCCTCCTCATTTTTAGGTTTACATACTACTGGCAGCAAAGACTCACTATGTTTGAGCCTCATAACTGGAGGATAAGGCGACCAAAAAGCATGCTGCAAAAACATTTTTACATTCGCTACCGGGATTCCCTCATCCTCACCAGCCTGGGATTCGTGACTTTGGCTCTGGGAATTGCTATCACAATCGGAGCTTTTAACAACGTGGTTGTCCTCCTTGGGATGACGCTTGATTTTCTGGGTGTCCTTCTTGGTATTTTGGGGGGTATAAACATGTACACCACCTACTCGTGCTTCCAGAGCTCCTTAGAAGCACGAGGGGCAGCTGAGAACATTCACCTCATGTGGTGTCAGGTTCTACATCAAGAGCCTGAACTCTTGGCCAGCATCTGCTTATAACCTCATATTTAATCTGAATATCTCTAGGACTCCAATTTTGTTTTATGCAGCATTTTCAAACTTGAAATAAAATTCTG EMBV3_31807 TTTGCTGGCCAAGTCGTGGGTCTCCCTTCCGTCCCTTCATCACATGGTACAGTTCACTTT Gene GeneID:507911|KCTD13:NM_001038057:269_cdna Constitutive 1 NULL GeneID:507911 25 GENE KCTD13 MGC134443 potassium channel tetramerisation domain containing 13 EMBV3_41648 CGTCAGGACTCCTGCCCTGGTGATACCCTCCCAGACTCAGTGGTTCTCCATCCTTCCTGA Variant GeneID:512976|C19H17ORF81:XM_002695784:295_cdna 479^645 2 EMBV3_26557 GeneID:512976 19 GENE C19H17ORF81 NULL chromosome 17 open reading frame 81 ortholog EMBV3_33011 CCTGAGTGGACACCTAGACGCGATTTGTCTAGAGGCTCTGCTGTCGGGTTCTTGCTTCCA Gene GeneID:100336279|LOC100336279:XM_002685744:494_cdna UTR3_Alt 2 NULL GeneID:100336279 2 GENE LOC100336279 NULL hypothetical protein LOC100336279 EMBV3_35943 CATTTGTAAGACATGCCGGCCCAGAGCGTACATCTTCAGCGACTGTCACAGCCACGTCCT Gene GeneID:531984|FAM86A:NM_001163938:222_cdna Constitutive 0 NULL GeneID:531984 25 GENE FAM86A NULL hypothetical protein LOC531984 EMBV3_39573 GGTAGCAAACGAAAGAAAAGGAGGAACAGTGCTTGCTGGCCCTGAGGAAAAGGAGGACAT Gene GeneID:281194|GJB1:NM_174069:41_cdna Constitutive 0 NULL GeneID:281194 X GENE GJB1 MGC137511 gap junction protein, beta 1, 32kDa EMBV3_26380 AAGGGGAAGGAGAACACGAAGGAACCGTGGATGCAGAGTACAAAGAGGCGACTGATGACA Gene GeneID:614722|AMPH:NM_001098130:67_cdna Constitutive 0 NULL GeneID:614722 4 GENE AMPH MGC140160 amphiphysin EMBV3_24717 TGGGTGTTTAATTACGTAGAGACCTACAGTAGAGGATACCTATAGCAAGTTACAGTCTTG Gene GeneID:613362|DTWD2:XM_002689000:26_cdna Constitutive 0 NULL GeneID:613362 7 GENE DTWD2 NULL DTW domain containing 2 EMBV3_25431 AAGCACATTTGGGGTCGGGGCAGGGAGACTCTTCTGGGCAATGTCTTTCTCAATCTCATC Gene GeneID:534380|FAR2:NM_001076022:5_cdna UTR3_Alt 2 NULL GeneID:534380 5 GENE FAR2 MGC139657 MLSTD1 fatty acyl CoA reductase 2 EMBV3_28114 GAGGAAGAAGCGTTGATGTCGGGAGCTTGAGTGTGTTATCTTCTCAGCTGCAAGTTTTAT Gene GeneID:613974|ZFAND2A:NM_001083762:287_cdna Constitutive 1 NULL GeneID:613974 25 GENE ZFAND2A MGC157341 zinc finger, AN1-type domain 2A EMBV3_39088 ACAGAAACTGCGAAGAAGATTTCAACTCCTCCCATCTGCCAGCAAGGCCAAGATTAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13477 TCACCCAGCCTTCATCTTTCTGTGGTACATTGCTCTGTGAGGTGACAATGCCCTGAATGG Gene GeneID:509426|RPS26:NM_001015561:968_cdna UTR3_Alt 1 NULL GeneID:509426 5 GENE RPS26 MGC137851 ribosomal protein S26 EMBV3_22470 CTCAAGAACCTCATGCAGCTCAACCTGGCCCACAACACCTTGAGGAAGATGCCCCCTAAG Gene GeneID:282000|PRELP:NM_174434:19_cdna Constitutive 0 NULL GeneID:282000 16 GENE PRELP NULL proline/arginine-rich end leucine-rich repeat protein EMBV3_31730 CAATGACTACAGTAAAGTTGCAGGATATAAAAATCAACACACAGAAATCCCTTGCATTCC Gene BVV0102_361898 + 0 NULL GK000030.2:76384298-77347518 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32723 ACAGCCCCCGCACAGTAGAGGGGGAACCCCACTCCATGTGTGTGACTTTGTTAGTTCTGT Gene GeneID:534625|CUEDC1:NM_001099064:36_cdna Constitutive 0 NULL GeneID:534625 19 GENE CUEDC1 MGC157300 CUE domain containing 1 EMBV3_25048 CAGTTTGTCTGGGTGGAGCCTGAATCCTGCAAGTCTGACAAGCTCCCAAGGGATGTCAAG Gene GeneID:338071|SSB:NM_176665:199_cdna UTR3_Alt 2 NULL GeneID:338071 2 GENE SSB NULL Sjogren syndrome antigen B (autoantigen La) EMBV3_42135 GCTAGATGTCGCCGAGCTTCCTGAGGTCTGCCTGGAGGACTGGCTGGAGAAGCGAGCCAA Gene GeneID:616095|ZMAT5:NM_001038210:101_cdna Constitutive 0 NULL GeneID:616095 17 GENE ZMAT5 MGC134273 zinc finger, matrin type 5 EMBV3_06934 CTCTTCTCCTCAAGCCTCAGCCAACACGGTTCAGTTCTGGATGGTCTCCCAACAGGGACA Gene GeneID:535567|MSTO1:NM_001046408:180_cdna Constitutive 0 NULL GeneID:535567 3 GENE MSTO1 MGC138136 misato misato homolog 1 (Drosophila) EMBV3_25302 GCTGGAAACAACGTGGAGGTAGATGAGTCTTTGTTCCAGGAAATGGATGACTTGGAGCTG Gene GeneID:541216|RWDD1:NM_001034726:31_cdna Constitutive 0 NULL GeneID:541216 9 GENE RWDD1 MGC128296 RWD domain containing 1 EMBV3_28448 AGGTCCTCAGTATCCTAACTACCCACAGGGACAAGGTCAGCAGTACGGGGGTTACAGACC Gene GeneID:540947|SS18:NM_001098122:13_cdna UTR3_Alt 2 NULL GeneID:540947 24 GENE SS18 MGC138909 synovial sarcoma translocation, chromosome 18 EMBV3_03795 CTGCGCAGAGCGGCCAAAGCCACGGTGTTTGTACTTGCTAAAGAAGCTCCTCCAGCTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25755 CCACTAGGGGAAAGAAGAACCCCCAGAAAACTGACTACACTTTCAGCCATCTTCAAGTGC Gene BVV0102_222942 + 0 NULL GK000003.2:12327828-12463737 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175529 1 XLOC_105310 NonCoding TCONS_00175529 XLOC_105310 NonCoding NonCoding - 3:12396378-12396689 - TSS130288 311 1 TCONS_00175529_1 53 1 0 0 0 0 0 0 0 0 0 0 0 0 0.000103476526272885 0 0 0 0 0 0 0 0 0 0 0.000796460869365369 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.152259486995385 0.37657810160646 -0.0484379730970242 0.379449353053188 GGCAGAGAGAGCAAATGAAATTCCCTTCTCTTCAGAAAAAGGACAAACATGGATGCATCCAGGTTGATTCAAGTTGGTCCTGCCTAAAGAGAGAGATCTTGAGAGTCCAAAGGTGTTCAGATTCTTCCAAAATTGTCTCTCCACCTTCACTCCTGACCCTAGGATCTGTGTTCTAGGAAGCCCGGTCTGACTGACCCTACCTCCTTCTTTGTTTACTCTGAAACTCCTCAGGATGGATGTGTGTAGTTTGCACTTGAAGATGGCTGAAAGTGTAGTCAGTTTTCTGGGGGTTCTTCTTTCCCCTAGTGGAC TCONS_00171993 TCONS_00171994 TCONS_00171995 TCONS_00171997 . 3' 13318 TCONS_00171993 TCONS_00171994 TCONS_00171995 TCONS_00171997 . 3' 13628 EMBV3_38478 GGCAGTGGAGCTGGGTATGGTGTTGGCTTTGACCTGGAGGAATTCCTAAACCAGTCTTTT Gene GeneID:537703|MAPK7:NM_001099080:84_cdna Constitutive 0 NULL GeneID:537703 19 GENE MAPK7 ERK-5 MGC148520 mitogen-activated protein kinase 7 EMBV3_07456 CCCTGGAAGCCCAGTCAGGCCGAGACAGGTCACGCGTGGGACGCAAATGCCTTTATTAAA Gene GeneID:515532|ENTPD8:NM_001077927:71_cdna Constitutive 0 NULL GeneID:515532 11 GENE ENTPD8 MGC151883 ectonucleoside triphosphate diphosphohydrolase 8 EMBV3_24223 TGCAAAGGTATCAGTTTATGAGGCAGAAGGAGCATCAGGAAGCTAGACGGAAGCGTCAGG Gene GeneID:517768|HS6ST2:XM_002699536:21_cdna Constitutive 0 NULL GeneID:517768 X GENE HS6ST2 NULL heparan sulfate 6-O-sulfotransferase 2 EMBV3_12908 CTTGGGTATAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGTAACTCAATGGGG Gene BVV0102_135407 + 0 NULL GK000001.2:65238600-65265850 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003562 TCONS_00003564 TCONS_00003565 TCONS_00003563 1 XLOC_000882 Coding TCONS_00003565 XLOC_000882 Coding Coding GSK3B 1:65238790-65463768 j TSS1825 9331 1 TCONS_00003565_5 363 12 0.958577987972104 0.0016816144596631 0.00197532453902133 0.00160523357907429 0.00124374371826637 0.00226404270816124 0.00112568084256788 0.00178296822130072 0.00136828454889929 0.00223717634491894 0.000354537029271154 0.000114788556972526 0.000395925648279026 0.000467781101512986 0.00103002092484372 0.000384457166561107 0.00568772974021655 0.000651530081089566 0.00178280115600503 0.00153129033053052 0.00138146389958263 0.000452658393840071 0.000639203140239723 0.00105325087296997 0.00082571140657022 0.00149178243190349 0.00114708372131289 0.00085350842421895 0.00058441257435117 0.000295329488340083 0.000441297052308879 NM_001101310.1 GSK3B Bos taurus glycogen synthase kinase 3 beta (GSK3B), mRNA. 0.0 2253 95.79 0.143392991104919 NM_002093.3 GSK3B Homo sapiens glycogen synthase kinase 3 beta (GSK3B), transcript 0.0 5685 85.28 0.52931089915336 TCONS_00003565_5 sp|Q9WV60|GSK3B_MOUSE GSK3B_MOUSE Glycogen synthase kinase-3 beta; 0.0 568 97.86 0.765840220385675 3 coding 1 1 1 1 -0.00466056050020347 0.987593222672989 -0.108724920219507 0.40138674834212 GAAGGGGGCGGACGCCTTGCTCGGCCGGCGATTCCCAGACGCCTCTTACGCGGGCGGCGGGGCGCTGGGCGGTGTAAGGCTGGGTGCGGGAGGAAGGAGGCGGAGGACGAGTAGGAGGGGGGAGGGGGAGTGGGTAAGAGCTAGGCGGCTGCGCAGACGGCACTCCTCACAGAGAGCAGCCCCCGACCCGGGCGAATGCGGGCTCGTGCTGCTGCCGCTGCTGCTGCCGCCGCCGCCGCCGCCGCCCGGGCCGAGTGACAAAGGAAGGAAGGAAGGAAACGAGGAGGAGCCGACCCCGCAGCCGCTGACAGGGCTCCGGGCTAGGGGCAAAGCGGGGACACTTCCTGAGCGGGACTGTGCAGAAGCGAGGGGCGGGAGGGCGGCCGCGCTGGTGCCTTGGACGGGGGAGGGGGCCCCGAGGGACGGAAGCGGTTGCCGGGTTCCCATGTCCCCGGCGTATGGGGAGCAGTCGAGGAGCCGCTGCCTGGGGTCTGAAGGGAGCTGCCTCCGCCGCCGCCGCCGCCATGGCCGCTGGATCCAGCCGCCGCCTGCAGCTGCTCCTGGCGCAATGAGGGGAAGAGCCGCCGCCACCGCCCGACTCTGACTGACTCGCGACTCCGCCGCCTTCCAGTTCGCCGGGCCCCCACCGTCAGCCCGCCGGATCCTTGCCGCTGCCGGAGCCGCAGCGTTTCCCGACGCATCTCCGAGCCACCCCTCCCTCTCCCTCCCTCCTTCCCATCCCCCCTTCTTTTCAAGCGTGAGACTCGTGATCCTTCCGCCGCTTCCCTTCTTCATTGACTCGGAAAAAAAATCCCCGAGGAAAATATAATATTCAGAGTACTTATTTTCAATCCAGTATTTGTCCCCGTTTCACGTGATATATATTTTTTAGGATCTCCCACCCATTTCTGCCCTCCAAGGAAAGGGAGTGGAAAGAACTGTGTTTTTTTCCCAGCCCCGGATCGTCTATATGTTAAATATCCGTACTGATCTGTCTTCAAGGAGAAATACATCGCTCGCTTTTTTAAATAGCTGTACAAAAGAAGTGAAAAGGCAAGAGGAGGAAGTCTTTTTCTTTTTCCTGTGGGAAAACTTAATGCTGCATTTATCATTAACCTAACACCCCAACATAAAACAAAAGGAAGAAAAGGAGGAAGGAAGGAAAAAAGGTGATTCGGAAAAAGAGTGATCATGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCAGTGCAGCAGCCTTCGGCTTTTGGCAGCATGAAAGTTAGCAGAGACAAAGATGGCAGCAAGGTGACCACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACAGACACTAAAGTGATTGGAAATGGGTCATTTGGTGTCGTGTATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTTGCCATCAAGAAAGTATTGCAAGACAAGAGATTTAAGAACCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCAAGTGGTGAAAAGAAAGATGAGGTCTATCTTAATCTGGTGCTGGACTACGTTCCGGAAACAGTCTACAGAGTCGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATCTATGTCAAGTTGTATATGTATCAGCTGTTCCGAAGTTTAGCCTATATCCATTCCTTTGGAATCTGCCATCGGGATATTAAACCACAGAACCTCTTGTTGGATCCTGATACAGCTGTCTTGAAACTCTGTGACTTTGGAAGTGCAAAGCAGCTGGTCCGTGGAGAACCCAATGTTTCGTATATCTGTTCTCGGTACTATAGGGCACCAGAGTTGATCTTTGGAGCCACTGATTATACCTCTAGTATAGATGTATGGTCTGCAGGCTGTGTGTTGGCTGAGCTGTTGCTAGGACAGCCAATATTTCCAGGAGACAGTGGTGTGGATCAGTTGGTGGAAATAATCAAGGTGACCACAAGAAGGAAGGAAATTTTCTTCAAACTAAGTCACATCCTTGGACTTAGGACTCTTCAAGAAATTGACATATCACCTCAGAAGTGCGGGATGCTAATGCTGGAGACCGTGGACAGACCAATAATGCCGCTTCTGCATCAGCTTCCGACTCCTGAACAGTCCCGAGCAGCCAGCTACACAGGAACAACCACCAGTTTACTTGAGTGTCACTCAGCAACACTGGTCACGATTGGAAAGAAAATTAAAAAGAGAAAAAAAACCTATTCATTTTAGTGTTCAATTTTTTTTTATTATTATTGTTGTTCTTATTTAACCTTGTAAAATATCTATAAATACAAACCAGTTTCATTGTATTCTCACTTGAGGGAGATCCAGGGGGTGGGAGGGGTTGTGGGGAGGGGGAAAGAGGAGCACTAGAACACACAATCTGTCTCCCACGACAATCTTTTTTTATCAAAAGTCTGCTGTTGTATACTTTAAAAACAGGACTCCTGCCTCATGCCCCTTCCACAAAAGAAGAAGACTTTGTTCTGTGCTGAAGTTTCTTTGAACTTTGTTTTCTTTTAAAGTCAAGTGTAAGACTTGGGTATAGTGCACAGCTTGAAATTGGTTGGGAGCTTAGCAGGTGTAACTCAATGGGGACTTAAATGTCACTTGTAAAATTAATCCATATCCTCGGGTACTTGAAGACTTGCCTTTGGCATGTCAATGGCAGGTGTGGCAGACAAAGGAAATGTGTGTCATTTGTAACCCGGGAGGTCAATAAAGTTTGAATCTATAAGGGGAAAATTCTTAATTGATGTCAAGGTTTTATTTTACTCTTAATCAGTGCTAGTGGTGAAGAAACTTCTGTAGGTAAAGAAACTTCTGAAGCTGTTAGGGGAGAAGCGTGTGTGCTCTTTGTGTGGGTCTTTGTTTGCCTGACCAAAGGTTCTCTATAAAACTTAGTACAGTTTTAATCCAGTGACCTAGGAGAAGACTGAGAAGGGTATTGAGCTGGCCACTCTGGCTGCAGAGGTCAAAAGCTGATGAACCTGGAGGAGAAGGATGGGCCGGGCAGATCTCACCACTGTGAATGAATTTGTCCAGATTTTTTTAATCTAAAGTTGCTTCCCTTGGAAAGATACACTTGAGAGGACATCTTAGTTAAATAATGTGAATTGTAACAGTCTACTGGTTTATTTTTCGTATTTTTTAATTGCAAATTGAGCTTGCAGAAATTGCCACATTCTGCATATAGTTTTAATTTTAACTCCAAATCCAGAATCTGTATTTAATTTCAGCTTTTTTAACCTCAAGCTTTTTAAATTTTATTTATTGATGCATGTGAGATAGGCCATGATGATTTTAGATGGTAGGAATATTAAAAACTACACATCAAAATGATATAAACAGTCACTTGTACCTGCTGACTTTATAGGAAAACTGATTATATAAATGTGTGTATATGTGTTATATACATAGATTCAGTACTGCCTTTTGTTTGGGTTTTTTTTTGTTTTGTTCTGTCTTTCTGTTTTTGTCCACAATATCAAAATTGACTAGTTGAAGCATGAGGATGTTTCCCCCTACACCTAGTTAAGAGTTTTTGTTTTCTTCATATAATCAGTGAACAGTGTAAGACTCAGTCTCTGTTTTTGAAGAAAAAGCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGATTACGTTGGCAGTAAGGGAATAGATTTTCACAGCTGGTTTGTCTTATATTTTTAAGGTTGACATCTATGTGGGCCTTATATACTCTAAAATGAACCTTAGACACCTTGGTGCTTATGGGCCATTACTTGACCTATGAATCTTTAAGGCACAATCAGTTGTACTTTACATTTAAAGATCACTTGAGTGATGGCCGCCTTTCCCGCCTACCTTCCTTCCTTCCCCACACACCTTTCCAAGGTTAGCTGATAACTGTAGGGCTGCAGAGCTGAGCCCCAGACTGTGTGTAACCTTTTACCCTCCTTGTCACCTTCGGTCATGTTAGGAGCTTCGCCCTCCAGGTGATTCGGAAGTGGAGTCTCTTGGCAGCCCTCACGCAGGTTCCGGCACCCTGTCCTGCTTCTTAACCAAGTGTGTGTGACTCTCCAAGAGAGTCGTACTGCCTGCTGACATGAACCAGTACCCAGAGAGGCACCTGTGAGCCATCCTAGTTTTCACTCACTGTCTAGCTAAGCTCTTAAGCCACAGAAGGGTTTCTCCAACCTCTGGTTATATCAGAGTTCGTGAGAAAGGAAACACACTCACTCAAACCAAATCAAACCAATTGCATTTTACTTTTCATAATGAGCTTCTGAGAGCAAATTAAGATTTGAAAGAAGTCTGAATCAAAGTATTTGACAGCATTAATTCTTAAAGGGAATGGCTTTGATAGACCATTTCAGAAAGGGTTTATAAAGAATCTGGATGGCAGGTCTGTGACAGAGAAGTGGACCTACTTTGAGACCAAACTACCCAGCCAAACATGTGGACACAGACAGTACTCTGAACTTGATATACTTGCTGGAGAATGTAAAAATCTGTGCTTCTTTTAGGAAACACTTTCCCCCGTAAATGGGGTAAGAGAAGAGAGAAAAGTCAAGTTTTTCTCTCATTTTAATTGTGTGTGTGTGAGGGCTGAGGTTCGTGATTTTTCTTTCTCAAGGATCATGGTGGGATCACAGAACTCTTTTATACAAGTGGGATCCAGGTCTCTGAATAATGTTTTTTGTAAATAATAATAATAAAAGCTCCTCACCAAATTCAAGCTTGTACATTATATTTTCTTTCAATGTTTTTAAATTTAAGTTCTATTGTTTTGTATGTAAATATGTGGACCCAGGAACTGTTATTAATGAGCAAAAAGTTACTGTTCAGGGCAGTGATTCTGTTTAATAATCAGACAAATTGTAGACGAGCTTTTTAAAGCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAATAACTCTAGCAATGTATAGTGTATCTATATAGTTTGGAGTGCCTTCGCTTCCATGTGTTTGTTTTTTTGTTTCCGTTTTTCATTTTGCAGATATTAATTGGTCTCGATATCCATGTCTCCCTGTCCCACCCCCTTCCCTTTGAAATAGTGGCTCACTCATAACAGTGTCTTTGCCCCTTCCACAGTTAACCATGCTCAGGAGTGGAAAGAGGAAACCATAATCATTTTCTTAATCTCATTTCATTCAAGCCCTACCTTTGTTTTGGTTCTGAACATCTGTTTCCTCCTCAGTAGCAGTGACCAGTTCCATTTCATCCAGGGACTTAGTGTAGTGCCAGGGAGCCCTCTAGCCGGAGAATATGGAATAGAGTAGATTTTGCTCGTCTCTTCCCCCAAACCCTAACCATGGGTCTTACAGACAGCAGATTCCGGGAGCCTTCTGCCCTCTCTCTCTCTCTCTCCGTTTCATCTACTTCCCTCCCAAATGAGAGAAAAAAGAGAGAGAGAGAATTGGTTTTTGTAAATCGATGTTTCTTAATACTTGTATCAGTTTTGATACACGAGTGGTCTAAAATGCTGTGGTGCAATTACTAGTGGCCGCTGCACGATTGCCGCCCACGCGGTGGGGACTTGTTTTCACAAGGGAACTTTCCTCCCTCCTGTCACCTCTACCCCTGTTCAATGAAATGTCATTTTAATTTATCTTTTTAAAAAATCTGTTTCTTACTGTGTGCCCATCATGAAGGCCTTTTTCGAAAGAAAAAAAAAAAAATCAAAATTACTTGTTTTGCCTCCAAGTACTCCATACAAGATGTCTCAAGTAGAAGAAGAAGAAAAAAAAAAAACTTTACCAAACCAAAGCTTGCTATTTTTGAAATATCATGTGTTCATTCCAGCAAGGCAGAAGACTGCACCTTCTTTCCAGCAACGTGTTGTGTCCTTTTTTTCAAGTCCTCTTAATTTTTAGACACATATTTTTTGTGTTTTAACAAAGCCTGCCTAACCAGTCATCTTGTCTGCACCAATGCAAAGGTTTCTAAGAGGACTATTGTATTCTCTATCCCTGTGGATATAAAGACACTGGCATTTCATTTCTTTTTCCCTTTCCTTTTTAAGGGATTTAACTTTGGAATCTTCCAAAGGAAGTTTGGCCAATGCCAGATCCCCAGGAGCTTGGGGGTTTTTGTTTTAAACCAAAATTGTATCTGATTTCTCATTCATGTTAGTTGATCATCTAATCACAGAGTCAAACACTTTCTCTCTTATATCCCTTATATAGAAAAATAAACTAAGTATGCTTTACAGTAAAATCTGTCTTTTCTGGTAGAAACCTGAGCCACTGAAAATAAGACAACTAGAAGCAGAGTAGAGCCCCAGACTAAGGTCTGTGTTTGAGAGGCTTTGGAAGTAATCTCTGGGGTTTGGATTATTTTCACAAGGGTTATGACGTTTTATTCAAGTTTGTTGCTCCATTTGCACCTCTGCAATAAAAGCAAAATGACAACCAGTACATAAGGGGTTAACTTGACAAAGTAGACTTCCTTGTGTTGATTTTTAAGTTTTTTTTTTCTTACTATATCTGTCTACAGGCAGATACAGATAGATGTATGAAAATGTGCTTGCCTGTAAAATTTGCATTCATAAATGTGTTGCCGATGGATCACTTGGGCCTGTAAACATACCAATTAGCGTGACCACTTCCATCTTAAAATCAAATCTAAAAAACAAAATTTATTATTATATATATATATATATATAAAGGACTGTGGGTTGTATACAAACTATTGCAAACACTTGTGCAAATCTGTCTTGATATAAAGGAAAAGCAAAATCTGTATAACATTATTACTACTTGAATGCCTCTGTGACTGATTTTTTTTTTTCATTTTAAATATAAACTTTTTTGTGAAAAGTATGCTCAATGTTTTTTTTCCCTTTCCCCATTCCCTTGTAAATACATTTCGTTCTATGTGACTTGGTTTGGAAATAGTTAACTGGTACTGTAATTTGCATTAAATAAAAAGTAGGTTAGCCTGGAAATGAAATTAAAATTCACAAGTGTGTGGTCTTTATTTCAGTACCCAACCTTATTTCCTTCACCCTATCTATTTTGCCAATGCATTATGTAGTCACATCACCACTTCATTCCTCCAATTAGAGAAACACGAAGCTGTTAACAAAAGTCAAGATATGAACACTAGTTCTCGTTCTCTTAAATGATCTTATTCCATTGTATAGCCCCAAGAGGTGCAGCTTCCATCTTGGAAACCTTTGGAGTTGATATCGAGGAAGCTATGCAAACATTGCTTTGAATAGAAAGAATACAAGCCTGAAAGGGACAAATTTTTAAAAATGTGTATAAGCTTCTGTCTTTGATTCCTGTGTTCATGGTCTGGTGTAGCTTTTTTTTTTTTTTTTTAACTTTCATCCCATTAGTAATGGTCTTTGGGAGTATCTGTGAATTATATGAACACCACGAATAGTGGGGCTGTACCTCCCAGGTAAACCAACACATGTTGTGTTTGAGTCTGTTCATTTCCAATACTGGATGATGTATGTAAACATGTTATGTCTCTTAGTGCAAAAAGAAACATTTTTTTAGGGCTGGCTCACTCCGTCAGGCCTAATCTAAAGGCTAGATATAAAGTCATGTGACTGCTGCTTCAATAAAAACAAATTTATATTGGATAAAGTCTGGTCCTCTATTTATTGTTGTGGTGGTCGGCTTGGCTGATATTTATAAAATAAACACCTTTACCAGTTGCAGGGGTTTGGGAGGGGAAGGGTGGCAAGATGTCACTTGTGTAATGGGTTAAGGACTTTGAAGTAGTGATGAACCCGTCCTTTGAGATCATATCTCAGGTGAGCAGTGACCCTGGGTGCCCATTGAGAAGGGCAGTTATGAAAGGGAACACTCAGGTTGCAGCTCCTCTTTGTAGAGAAGTCTGAAGTGAGCAAAAGCAATGGGGTGTTCACCCCTCTCTCAGGTGCAGGACTATTTCACCCACACTAGCACCTTCAGGTTTAGGAGGGTTGTGGTTATGTTATGGGGAATACTGAAGCTGTCAGGGAAAATGGTATGATGAAGCCCACGAGTTGTCACAGGCTGTGAAGGAATGGTCCATTAAGCGTATGTTTCTCTTTACATCCTCTTTTCAGAAAAGAGAGGACACAGTGGGCCTTCCCACGAGTTGTTGATACCCAGGCTTTAACTGGATCCTTAAAGTCCAGACCAGGTAGAGATTGGTGGCGGAGTGGCTCTAACTTAACGGAGCCAGAAGGTAAGCAGTAACTTACTTGGGCTTCTCTCCTGAGCTTTGGAGACTGACCCCATCCTCACCTGACTGAGGCAAGACCTAGAAAAAGAATGGGGGTCTCAGGGATGCCTAGAAACTGATGCTAAGTTCTACTGCTCAAGAGCTCAGTGAAGGGAGTAACAGGGAAATTCAAACATTTGAGAGTAGGAAAGTTGACTTTGGCTCTTAGCCCTATAAACTGGACATCCACAAAGCTGCTAAAAGGAAGACTCCTGTGTGAGCTCTTCGGTGCACCTAACCTTGAAACTTAACTGCACTTGGACTACACTTAGTTTTTATAATATGTGTAATCCATACATACATATCAATTCAATGTTTGTGAAACTGCCCGGGTGTTTTTAAAATCAATACTGGGAGATGGATGTTTCTACATCCCACCTTAATCACCCTGCTCTTACCTTACCATAGTCCACACTTAACAACCATTTCAGACTCGAGTGAATAGCACACTCAAAATTATGTCAATGGGAAAGAAGAGATGTATATGGTACAGGAATATGTTTATATTTCTAAATGAGTATAATTAGACACAATTACTGGGGGCAAAATCTGCAATGTGTTTGGAAAGAACTCCTTTTCCCCCAGATTCTTTTCTAAAAAGTAGTGTGTTCTACGTCCCCTTGATGCAGAAGAGGCTGGGGAATCTGGAGGGGTGACAGAGAATATGTTTGTTTGCTTTGATGTATAGTCTCAATGACTTAAGTTCTCCAAGTGTGACCTTCTTGAAAAATGGTAAAAGTGAATATCTGTTCCTTAAAATTCAGTTAACTTGTAGCTTCATTTGCATAAAAATATTAGTCATTTAAAATTACTACACTCTTGATATGTAAAGTTTTTATGTGGAATAATTATTTTTATGAACAAGCCAAGTTAAATAATGCATTTTTTATGTTCTCACACCAAAAGTCTTCAGATGTGTAAGGGCAATAGCAAAATATGTATTATAAAAATAGAAATATGTACAAATCTATTTCTCTTTCACCATCCCCACATTTCTTTTTCCCCCAGAAAGGAAGGCCAAAGAAG EMBV3_01892 GCACACTCACTGTCCCCAGGAGCTCGACGGCCCGACATTAACGGGATTTTCCTATTTTAT Gene BVT0102_032661 + 0 NULL GK000010.2:13583547-13857916 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012698 TCONS_00012699 TCONS_00012697 1 XLOC_007911 NonCoding TCONS_00012697 XLOC_007911 NonCoding NonCoding - 10:13706336-13711278 - TSS9581 1009 1 TCONS_00012697_2 67 5 0.796802266747622 0.00147623994130858 0.000388417888986594 1.34859632996646e-08 0.000809948950085198 8.60159965220739e-07 2.85506663729767e-07 9.81618685477278e-05 0.000386799344305586 0.000314320094293793 0.000126344053228328 0 0 1.74703693802956e-12 0.000163099579423313 7.36034698810879e-06 0 0 0 0.000223756921320491 0.000581633806063759 5.00466726394996e-07 0 0 0 0.000447496324344824 0.000693459027376817 0.000470264862271667 0 9.7283230184447e-07 0 XR_236014.1 SMAD6 PREDICTED: Bos taurus SMAD family member 6 (SMAD6), transcript 6e-124 448 100.00 0.244796828543112 0 noncoding AGGAGAGAAAATGCAAAATGTCTTTTTAAATCCATTTTAATATGTCTTAAGGACTGGATGATCGATGTGGGAGGCTTGGAGGTGAAGAGATATGCAGCCGTGTCACATGGTGTCATAAGTGGTGGAATGAGATGACCCCAAAGCCCTGCTCTGATTACCAGATTCCCTTTGCCCCAGCACCAAAGCAGAGGAGACCCAGAAGGATAAGCCAGAGCATTGGAGAGCTGGGTTCCCACCCCAACAGTAAGGGCTGTTGTGAGGATTAAATGACGCCGTGCAGATGAAGCAATGGCACCTACCAAGCACTGACAAGAGAACCCTAGAGACTCACACCCAGGTCTTCAGCCTCCAGATCAGTGCTTCCCCTAAGAAGCCAGGAAACCAAGCTCCTCGGTCTCCTTCTTGCTGCTGCACCCATTTGCCAGCCCAGACAGCGCAACAGAAGGAACCCCATGCCTATCAAGTCGGTGCTCTTCTCCTGTAGCTGCAGAGACTGAGGACTGGTCGGGAAATTAGCTCGGGCCCTGCAGGGACGCCATCAGACCCCACTGGGACCCAGTCCCCTGACTCCCAGACTGGGGCTCCTTCCGCCAGCTCACAGCACCCCCTGTGCCCCTCTGCCTGCTGCACTGGGAGGGTTTGAGGGCAGAGGAGCAGGCGCCCTCCTGACCAGGCACACTCACTGTCCCCAGGAGCTCGAAGGCCCGACATTAACGGGATTTTCCTATTTTATTATCTCATTTTTCCTTATCCCGCATTCCCATTTGGACCCCATTTATCAATCCTCCCATTTCCTGCACTTTAAGCAATTAATTTATTATCGCTTTTAACTTTTTGAGTTGGAGCCACTCTTTCAGTTGCTCTAGTGAATCACTCTCACTTTTAGATTTTTGGCATTTTATATCTGAGGTTCTAGTATTGTTTTTTAATCCAGTTGATTTTATTATGCATAAACTCAATGTTTTCAGATCCTGATTTCTCTTATTATTTGTTTTTAAGAATATTCGTC TCONS_00012685 TCONS_00012687 TCONS_00012689 s 3' 122791 TCONS_00012685 TCONS_00012687 TCONS_00012689 s 3' 122791 EMBV3_13819 CTTCGAGGCATTCTTCAACTCTCTGCAGAAGGTCCATCCACAGGTCCGGAAGATTGGGGT Gene GeneID:510409|DUOX1:XM_002690941:276_cdna Constitutive 0 NULL GeneID:510409 10 GENE DUOX1 NULL dual oxidase 1 EMBV3_06055 CTGTGATCGGAACGATTGGAGACATAAAATCATAACGGCTTCTTGTCTGTCCTGAGTGAG Gene GeneID:512078|AP4B1:NM_001101950:83_cdna Constitutive 0 NULL GeneID:512078 3 GENE AP4B1 MGC155066 adaptor-related protein complex 4, beta 1 subunit EMBV3_27099 GCTGATCCCCTGGCCGCTGGAGGAGCAGTTGTAAACAGATTCAGGTGTTATCGGGCCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04536 GGTGTTGAAGCCCAGGAAGCAGGAGGGTTGGTAAGAAGAGGTCGGGCTCCTGAGAGGAAA Gene BVV0101_077731 + 1 EMBV3_39274 GK000019.2:36225628-36250352 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24136 AAGGAGAAGTACAACGGTCCAAAGAAATCCCTGAGTGTACAGCAGAGGTCAGAGGAGGTG Gene GeneID:100336889|LOC100336889:XM_002687368:65_cdna Constitutive 0 NULL GeneID:100336889 5 GENE LOC100336889 NULL promotilin-like EMBV3_31617 GGCTCTAAGCATCTAGCCCCGTCAGGCTTATAAACATTAGACAGATGGCAAGGTCAGACC Gene BVT0102_320463 + 0 NULL GK000022.2:56860069-56867886 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127565 TCONS_00127564 1 XLOC_077676 NonCoding TCONS_00127565 XLOC_077676 NonCoding NonCoding - 22:56866699-56867547 - TSS95382 848 1 TCONS_00127565_4 83 0.133254716981132 1 0 0 0.000130344508731393 4.36504483195271e-05 2.93778740157044e-05 0.000954831077844815 4.21801448471481e-06 0 0 0.000158174872386648 0 0 0 8.23968790266442e-13 8.21605090009395e-17 2.24274443466781e-05 0 0 0 8.45629154013502e-05 0.000237452914605971 0 0.000105009443393073 0 0 7.35334350790935e-05 0.000182782773089684 7.60028529679356e-05 0 0 0 NM_000539.3 RHO Homo sapiens rhodopsin (RHO), mRNA. 3e-77 293 68.09 0.962264150943396 0 noncoding CTGTGATCTGTGAACTTCCCAGGGGGAAGGTGGGTCCAGCCGGATTTCCCACGCTTTTGTTTTTTAAGCTCTTTTTGAGACAAAGGTGATGTTGGGGACCCAGCTCTTCGTTAAATGTGGGCAGGTAAACATAACTTCTAGAAGCTCCATACGGGCCCAGAGATACTGCAGCCTGGGTGCTGGGCAGGAGAGCTAGTGGTTTTTCAGATGCCGAGAGCAAGACCTGTCTCTCTGGGGGTTGCACTGGGAGGGAGTGGCCCGCGTCATGGGGGCTCTGCACTGGCCCCAGACTCTGGTCCTCTGATGTTGTTTTTTTGGTTTTTGTTTTCTTCTCAGGCCTGATGCCTGCACTCTGCATTTCCTTGACCGTCCTTCCCTGTGGCCCACCACCCGGCGCTGGTCTGACCTTGCCATCTGTCTAATGTTTATAAGCCTGACGAGGCTGGATGCTTAGAGCCTTGCCCAGTCTCAAAGTGGTCGCTATCAAGAGGAGATGATCATAGGAGATGAATTACTTATATTACTTGATATTATTCATAATGTTAACTACAGTCTGTCCAGCTCCTTACTATTTACAAAGAGCTCACACAAGCGAGCACGCACGCACGCACACACACACAATCTCATTTGATCTTCCCAGCAGCCCGTGTGAGGAGAGATTTGGAATTCCCATTGTATGGGGGAAGAAAGTGAGGCCCAAGGACAAAACAGCTGCTCAAGGTCATGAGCCAAGGGCGAGCTGCTGCTGCTGCTGCTAACATGTTGTAAGAGGATGCCTATGCCCTCCCGACCCGTTCATCTCTCCATTCATTCCTTCTTTCCTCCACCTAGCATTTATTAATAAGCAC TCONS_00129249 r 3' 340 TCONS_00129249 r 3' 1187 EMBV3_36428 GCGAGTCAGGGGCTCGCACGAAAGCCGCCGTGGCGCAATGAAGGTGAAGGCCGCCCTCGC Gene GeneID:100337383|LOC100337383:XM_002695258:253_cdna Constitutive 0 NULL GeneID:100337383 18 GENE LOC100337383 NULL hypothetical protein LOC100337383 EMBV3_20539 CTGAAATGCTGAATACGATCCTCAGGGATAACCAGGCCCACTTCCCAGTGGTCTTCCGTA Gene GeneID:531026|LOC531026:XM_002699616:26_cdna Constitutive 0 NULL GeneID:531026 X GENE LOC531026 NULL similar to melanoma antigen family A, 10 EMBV3_30758 TAGACAGTCCAGCCCCCTCCCATCTGGTGGAAAAAATCATCTACCACAGCAAGTACAAGC Gene GeneID:537914|TMPRSS3:XM_002685125:71_cdna Constitutive 0 NULL GeneID:537914 1 GENE TMPRSS3 NULL transmembrane protease, serine 3 EMBV3_42242 CAAATGAGCGAGTTACCTTCTGTGCTCCGTGCCTCAGTTGCCACATCTGTGAAATACTAG Gene BVT0102_116018 + 0 NULL GK000018.2:49439131-49443970 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083737 TCONS_00083739 TCONS_00083743 TCONS_00083738 TCONS_00083740 TCONS_00083742 1 XLOC_051337 Coding TCONS_00083739 XLOC_051337 Coding Coding TIMM50 18:49432023-49440500 j TSS62850 2399 1 TCONS_00083739_2 237 0.263443101292205 10 0.718145351580934 4.29062720090959e-05 3.50857693731293e-09 6.41157202180025e-11 6.77015589926876e-10 7.98089898719068e-12 7.22644461557269e-13 9.39726267613137e-22 2.43333672970706e-19 4.38880701472347e-07 0.000407651845350692 9.12536181469179e-05 0.000372156094183143 2.58254341068203e-09 2.52315575152683e-17 1.86339725780575e-08 0.000435750543294409 1.34900565166125e-05 0.00215978189271627 5.74796303126856e-08 7.64862582018506e-05 2.33518883048898e-11 1.4931332036995e-07 0.000951973664176768 0.000280409389104147 4.40206189438408e-10 1.91806270424139e-64 4.00614795109923e-16 1.99286367444364e-10 5.501350908541e-05 0.000263766763076062 NM_001035024.1 TIMM50 Bos taurus translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) (TIMM50), mRNA. 0.0 1267 99.86 0.293455606502709 NM_001001563.1 TIMM50 Homo sapiens translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) (TIMM50), mRNA. 0.0 939 89.33 0.296373488953731 TCONS_00083739_2 sp|Q3SZB3|TIM50_BOVIN TIM50_BOVIN Mitochondrial import inner membrane translocase subunit TIM50; 6e-172 483 98.73 0.991561181434599 1 coding 0 0 0 0 -0.223900353063916 0.172466519159266 -0.00781008989358209 0.869504483457258 TCAGCGCAAGATGGCGGCCTCGGCAGCGGTGTTCCTGCGATTGCGGAGCGGGCTCCGGCAAGGCGCGCGGGGGCTGTGTGCGAGGCTAGCGACGCCGCCCCCTCGGGCCCCGGACCAGGCTGCAGAGATTGGGAGCCGAGCAGGCACTAAGGCCCAGACCCAGGGACCACAGCAGCAGAGAAGCTCGGAGGGTCCCAGCTATGCCAAAAAAGTTGCACTCTGGCTCGCTGGGCTGCTCGGGGCTGGTGGGACCGTGAGCGTCATCTATATCTTCGGAAACAACGCTGTGGATGAAAATGGTGCCAAGATTCCCGATGAATTCGACAATGATCCAATTCTGGTACAGCAGTTGCGCCGGACATACAAATATTTCAAAGATTACAGACAGATGATCATCGAGCCCACCAGCCCCTGCCTTCTGCCAGACCCTCTGCGGGAGCCGTACTACCAACCCCCATACACACTGGTCTTGGAGCTCACTGGCGTCCTCTTGCACCCTGAGTGGTCGCTAGCCACTGGCTGGAGGTTTAAGAAGCGTCCAGGCATCGAGACCTTATTCCAGCAGCTCGCCCCTTTGTATGAAATCGTCATCTTTACGTCGGAGACTGGCATGACTGCCTTTCCACTCATCGACAGCGTGGACCCCCACGGCTTCATCTCCTACCGCCTGTTCCGGGATGCCACGAGATACATGGATGGGCACCATGTTAAGCCATTGCTTTGAATGGTGTGGAGGATGTCCGAACCGTGCTGGAGCACTATGCCCTGGAGGAAGACCCACTGGAGGCTTTCAAACAGCGGCAAAGCCGGCTAGAGCAGGAGGAACAGCAGCGCCTGGCCGAGCTCTCCAAATCCAGCAAGCAGAACCTCTTCTTCAGCTCTCTCACCAGCCGCTTGTGGCCTCGCTCTAAACAGCCCTGACCTCTGGGCCTCCGCAAACTCAGTGCCTGGGTTCCAGGCCCGAGGCCCAGCACTCCCAGACCATGGCTTGGGCAACCACGTGTCCAATAAAGTTAATCCCAGACGGCACACTCCAGTGTCCAGAGGGTCTCCAGATGGGCGCGTCAGGGTGCAGTGCGGGACACTGGGGGACCCCGTCCCACAGTGGCTGATCAGCTGCCGAACACAGAGTGGGTTGGTCTTTGACCCTGGCCTGGGAATCTGAAACCCTGGGCAGGACCCTGCCCTGCCCGCGTTTTCCTGTGTGCCTGCGTGTGGTCTGCGCAAGTGTCTCTCCCTCTTTGGCCCCAGATTCCCTTCGGAAAAAGAAGAGAGGATGGCGCTGTGGGATTGGAAGACAGGGAACCACCAGGCTGCTACGTAAATGTATCAAGTGTGGGCTTGTGGGACACCGTGGACCAGAGATGCCTCATGTCAAGGCTGCGTGGCTCTGCCGGCCGGGGCCCTAAGGTGGGCCTGGAGTTGCTTGATCTGATTTTTCAGTGGAAGGCAGGAACAGGGATGTTTATGTTAAATCTCTCAGTTTTAAAATGTTGGCTACTAACTCTGCAGACTGTAGCAGACCTCTGCAGCGGAACTTCCCACCACGTTCACCCCGTGTACTGGCCAGTGCAGCTGCCAGTGGCCGTGGGGCCATGACGAACTTGAGATGCGGCGAGGGTAACTGAAGGATGAGATTCTTAATTTTGTTTCTTTTTAATTAATTTTAAATAGCCACCGGCGGCTCCTGGCTCCTGCATTGGACAGCACATTTGGGTATCATTTACGAGTGTGAATTCCACCCTTTGTTTTTGGAGGCACAGAGTCTCAACCACTGGACAGTCAGGGAAGTCCCTCCAGACTCTTAAATAATACCCAAATCCAAGTTCAGATCCAAGCCCTACCACTCCGTGACTTGTGTGGTCACAAGCAAATGAGCGAGTTACCTTCTGTGCTCCGTGCCTCAGTTGCCACATCTGTGAAATACTAGTACCCTCCTCACAGGCTAGGCTTGAGGGTGGACTCAGACCCTCCACAGACACTCAAGATGGCAGCTGCGGGGACCTCGGAAGCACCTTTCTGCCTCCCTTTCCTCAGCTCTAACATGGGGGTGATGATAACACCTGTCTTGGAGTGGTCGTGAGGAGTAAGTGGGACAGCTCACGCTTAGGCTGTATGTATGTTCAATGGCGCTCATTGTTGCCAGGCCATATTGGTTCTTCACAGGCTGAACTGTCCTGTCCCATCTTGGCAGGGCTCCCCCACCAACCTGCTGGCTGTCCTAGCCTCCTGTTCCAGCCAGTGTTCAGTGCTAATACTGGTTGAATACTTTTAGAAAGCTCTTCCCTGGCATTTGTTAAAATAATTAAAATGTATTTGAAACTGTGCAGGCCAGATTGAACTTCTGAACTCTGGTAGATTTTTTTAAAGCTCACAGATGTCTATAAAGAATTAAAAAT EMBV3_29493 CAGGAACTCTTCCACGAGGCAGCCCAGCAGGGAAACACAGGCGTGCTTATGGGCATGTTT Variant GeneID:521454|SLC12A8:XM_002684815:230_cdna 493^639 1 EMBV3_27675 GeneID:521454 1 GENE SLC12A8 NULL solute carrier family 12 (potassium/chloride transporters), member 8 EMBV3_30053 CCGAGCGGCTGGTGGCCGGCAAGCTCAAGAAAGACACATACATCGAGAATGAGAAACTCA Gene GeneID:507939|RPN1:NM_001082605:20_cdna Constitutive 0 NULL GeneID:507939 22 GENE RPN1 MGC148585 ribophorin I EMBV3_16933 ATTGAAGGTCTGTGACAACCCTGTGTTGAGCAAGTCTATTGGCACCATTTTCCCAACAGC Gene GeneID:616398|DFNA5:XM_002686868:91_cdna Constitutive 0 NULL GeneID:616398 4 GENE DFNA5 NULL deafness, autosomal dominant 5 EMBV3_28394 GAGAACAGCCAAGCAGAGACAGGAACTGACAGACTACCTGACCCGGTGGACAACTGTTTT Gene BVV0102_283252 + 0 NULL GK000001.2:131499850-131548457 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30506 GCTCCGGCTGTGCAAGTTATCCTGGGAATTTCCTTTTTGATTTTGTTGGGAGTGGGAATG Gene GeneID:768018|TMCO2:NM_001077077:325_cdna Constitutive 0 NULL GeneID:768018 3 GENE TMCO2 MGC137034 transmembrane and coiled-coil domains 2 EMBV3_38575 CAAGGGTTTCATGGCCAATTACTGCCACGGAGAGTGTCCTTTCTCACTGACCATCTCCCT Gene GeneID:504995|LOC504995:XM_002685483:202_cdna Constitutive 0 NULL GeneID:504995 2 GENE LOC504995 NULL similar to growth differentiation factor 3 EMBV3_37941 AATAACCAAGTGCCGGCTTACAGAATCAGACTTGACCCACGTGTCCCAGAGCCCAGACAT Gene GeneID:789131|LOC789131:XM_002694082:321_cdna Constitutive 0 NULL GeneID:789131 16 GENE LOC789131 NULL similar to hCG15295 EMBV3_13886 TTTGAAATATCGAGGCCCCAGTCCCCAGAGTCAGAGAGAGACATTTTTGGCGCAAGCTGA Gene GeneID:281881|KCNH1:NM_174372:13_cdna Constitutive 0 NULL GeneID:281881 16 GENE KCNH1 NULL potassium voltage-gated channel, subfamily H (eag-related), member 1 EMBV3_25336 GTGTACCTTAGCTCTGCTGCTACCCAAAGCTCACACTCAAGTGCAACAGCCTCGGTAATG Gene GeneID:100301104|LOC100301104:XM_002688719:16_cdna Constitutive 0 NULL GeneID:100301104 7 GENE LOC100301104 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_30020 CAGCTCCTGAGTTGGGAAGGAAAGGGAAAGATGCAGCTGGAAGTAACCGAAGATGATGCG Gene GeneID:783336|WDR82P1:NM_001105459:343_cdna Constitutive 0 NULL GeneID:783336 22 GENE WDR82P1 WDR82 WD repeat domain 82 pseudogene 1 EMBV3_40949 GATTGCGCTCCGCGCTGGCCCTGGTTACAGGCCTGCTTTTCTCGCCCGCCGTCTGTCGTT Variant GeneID:532422|HSD17B8:NM_001046324:146_cdna 63^280 3 EMBV3_11788 GeneID:532422 23 GENE HSD17B8 FABGL HKE6 hydroxysteroid (17-beta) dehydrogenase 8 EMBV3_25621 ACTGAAACTTCTCCTAAGAAAATAGAAGAGAATTGGTCCCTAGGAAAGACCTTCTTATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06578 AGCTGCTCCCCAAGACAGCTTGCATCATACCCCACCTGCTTTTCAGAGTATGATCTGCTC Gene GeneID:507217|LNP1:XM_002684709:38_cdna Constitutive 3 NULL GeneID:507217 1 GENE LNP1 NULL leukemia NUP98 fusion partner 1 EMBV3_43684 AGAGGAAAAACGTCGTCAGTTTGAAGATGAGAAAGCAAACTGGGAAGCCCAACAACGTAT Gene GeneID:408000|SEPT7:NM_001001168:39_cdna UTR3_Alt 3 NULL GeneID:408000 4 GENE SEPT7 CDC10 septin 7 EMBV3_12973 GATGGGAGATTGAAAGGGAGGTTGGGATTGAAGGTTAGGGAGATGGAGATGAGTAATTAG Gene BVT0102_249762 + 1 EMBV3_21302 GK000012.2:32556402-32604815 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08995 TTGAGAAACCTGCGGGACTTCCTTTTGGTCTACAATCGGATGACGGAACTCTGCTTCCAG Gene GeneID:514937|FXC1:NM_001040530:31_cdna Constitutive 0 NULL GeneID:514937 15 GENE FXC1 MGC127846 TIM9B fracture callus 1 homolog (rat) EMBV3_32021 AGTATATTTGATTACTACAGCACAGGGAAAGCCACTGCTGAGGCCGAAGCCCTACAAGGC Gene GeneID:506979|STOX1:XM_002698863:451_cdna Constitutive 0 NULL GeneID:506979 28 GENE STOX1 NULL storkhead box 1 EMBV3_18964 ATACGTTTCTGGAACATTACGATTTGGAATATTCCAGTGCTGAATATTCAAATGAAACTT Variant GeneID:504650|CEPT1:XM_002686145:258_cdna 783^867 4 EMBV3_13291 GeneID:504650 3 GENE CEPT1 NULL choline/ethanolamine phosphotransferase 1 EMBV3_28346 CAGACAGGCGTACACAGCTCACACAGATCGCCATCTTGAAGGAACAAAACTGGTTGAAGC Gene BVT0102_109357 + 0 NULL GK000014.2:75780622-75849443 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04764 CACACAAGGAGGTAATGGCAACCCAGAGGCTAGGACCCAGATAAGGCTAACAGAATCCCT Gene GeneID:506903|GALNT6:NM_001015534:41_cdna Constitutive 0 NULL GeneID:506903 5 GENE GALNT6 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) EMBV3_40901 TTCCTGGTGCTCTTACCTGATGTGGGCCCTAATGATATATCTGTGTAACAAAGCTGCTAC Gene GeneID:505705|MS4A13:NM_001075220:2_cdna Constitutive 0 NULL GeneID:505705 15 GENE MS4A13 NULL membrane-spanning 4-domains, subfamily A, member 13 EMBV3_08017 GATGAAGTGCTGTCGCCAAGGGTGCTTCCTCCAGTGTGTCCGGAAGGTTTCAGTTAAGAC Gene GeneID:517054|WFDC5:XM_002692329:110_cdna Constitutive 0 NULL GeneID:517054 13 GENE WFDC5 NULL WAP four-disulfide core domain 5 EMBV3_03260 CTGCCTCTTCCCTAAATAGTTGCCTTTTAGTGCTGTGACAGTTAAATCCTACAGCATAAC Gene GeneID:538975|CNN3:NM_001038179:177_cdna Constitutive 0 NULL GeneID:538975 3 GENE CNN3 MGC134031 calponin 3, acidic EMBV3_16457 ACTGCAAGTCCTTCTGGTTCTAAATGAAGCCTCCATCACCTGCTCTTCAGCCACAGTCAG Gene BVV0102_134723 - 0 NULL GK000013.2:58510711-58537700 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045752 TCONS_00045751 TCONS_00045750 1 XLOC_026517 Coding TCONS_00045751 XLOC_026517 Coding Coding RAB22A 13:58532277-58586411 j TSS33323 7589 2 TCONS_00045751_1 201 7 0.859937561191879 0.00102832741708799 5.31319715695601e-08 0.000801789940161991 0.000261422131170083 0.000803780393133778 0.00042912401527668 0.000363737525572544 0.00131725003100431 0.000118233556790253 0.0006713348128171 0.000151393754010273 3.51507158364022e-05 0.000337371626225637 0.000404537334491969 0.000252208190126623 0.000517816972997739 0.00101145367984603 0.00252610011428515 1.00356606977032e-05 0.000930713862654028 0.00015956975285714 0.000350269488762992 0.000534244487697923 0.0014835636103431 0.00134815831595323 0.00149934755457626 0.000539307907202484 0.000147451064072007 0.000229056286168043 8.15455842145293e-10 NM_001099165.2 RAB22A Bos taurus RAB22A, member RAS oncogene family (RAB22A), mRNA. 0.0 3788 99.86 0.27763868757412 NM_020673.2 RAB22A Homo sapiens RAB22A, member RAS oncogene family (RAB22A), mRNA. 0.0 1216 84.79 0.145869020951377 TCONS_00045751_1 sp|Q9UL26|RB22A_HUMAN RB22A_HUMAN Ras-related protein Rab-22A; 3e-133 377 98.35 0.900497512437811 3 coding 0 0 0 0 -0.0652616821302695 0.768715891491585 -0.00950562340431579 0.903522342411778 GATGAACGAAGCACTAGCTCTCCCGGGCCACCGCAGGAGGAGGAGGAAGAGAAAGAAAGATACAGGTGTGGGTAAATCAAGCATTGTGTGGCGGTTCGTGGAAGACAGTTTTGATCCGAACATCAACCCAACAATAGGGGCATCTTTTATGACCAAGACTGTCCAGTACCAAAATGAACTACATAAATTCCTCATCTGGGACACAGCTGGACAAGAACGATTTCGTGCCTTAGCGCCAATGTACTACCGAGGCTCGGCTGCAGCTATAATTGTTTACGACATCACGAAAGAAGAGACATTTTCAACATTAAAGAATTGGGTAAAAGAGCTTCGGCAGCACGGCCCACCCAATATTGTAGTTGCCATTGCAGGAAATAAGTGTGATCTTATCGATGTAAGAGAGGTCATGGAGAGAGATGCCAAGGACTACGCCGACTCCATCCATGCAGTCTTTGTAGAGACAAGTGCAAAGAACGCGATAAACATAAATGAACTCTTTATAGAAATTAGTCGAAGAATTCCATCCACTGACGCTAGCCCACCTTCTGGCGGAAAGGGCTTCAAACTCCGCAGACAGCCTTCGGAGCCAAAGCGGAGCTGCTGCTGACCGGGCCTCGGCCCCCCGGGCTTCCCGATGAAGTAGGTGGTCCTGACAGGTCTCGGGAGGGCTGGGCCCCGCCTCCGGGGGTCACCTGCCAGTCTTGGATCTTCTTCGGGCAACAAGGATTCACAGGAATTGACCGGTTTCGTCTCCTCTTTGGAGACTGCAGCAATAATACGTCAGTCTGTGGACTTCCGTCCTGTAAAGAATCTCTGTGTACACAGGGACTGCATCGTTGGCTCCTGATCTTGCTGAGAAGGAATGTACAGTTGTGTGGATGGTAGGATAAGATCATTGAGTAGCTTTGTAGTCAAGATTCTATGTCACATTTGTAAAGGGAAAATTAGCACTTTTGTGGTTCTTGAGGAAAAAAAAAACAGCCTTGTGGAGACATTCCTTCCCTTGGTTTCCCGTTGCCACTGTTAGAGGGAATGGTAGCATTTAGAATGTGTGCACTTACCACCGTGGAGAGATGGCAGTTACGATCGTCTGAAGCTGACGTGGGTTGTTTCTGGGGCTGATGGAGAAGCACCCGCCCCTGCCGTCTCTGACGCACTTTCAATTGGGCGCAGCAGCCCAGGACCCTGTCGCATGCGTGTCCCCAGGCACGTCACTCGCACCTTTTTAGGTAAGCTCTGATGATTGAGATGGTGGTGGTAGAGAGGCTGCCTGGAACATGTTGAATTGCAGATTCAGTTTAAACTGACTAGCCATGTTTTCCAAAAGAAGAGAGGAAGCCCAGAAAGTGGAGTAAATGCTGTCCGTTTTTTATTTAACCGAGCTGTCTTGGTGGGGGAAACAGTTATCTGCAGCTTGCTTAGCACATGTAAAGTTGTAGTCATATATTTATGAGACCACTGCTTACAGATTATAAATTATGTAAATACATTAATAAATTCTATGTTTTGTTTACCACTCCATTCACTCTTGCACCGGCCTGGCGCGCGCACCCCGTTTCTCAGTCCGTGCACGGAAGTTCTTTGAAGCACGTTTTACGTGGTGCAGAAGCATAGAGCATGTGGCTCTGGGTTGGCAAGGGTTTCTCTGCCTTCCCTCCCACCACACCTCCCCTACAGTCCCATCTGGAAGCCACCGTGCAGACAGATGCCACTTGGAGAAGCCTGACGAGTCCCTCCTAGCCTCGGGGTACAAGACCAAGCTCCTGAGCCCATGTCATTTACCTGGTCTTGGAAATAAGCTGCTTCTAGCTTTCACAGCAGCCTCAGACCAACTGTTTGAAGAGCGCTTCTCTTGTTAACAATTCCGCGTCTCTTTCCCTTATTTTCCCCTACCTCTCTTAGTGGTTAACACTCTTTTCCCTCAGGGAGCCTAATGAGCTTTTTAATATAATCTAAAAATAAAGCACTGAAGTGAAGTTGGTGAAAATTTGTTCCTGGTCTAATCTGGCACCCTTCCAACCTGAGTATTGTAAGGGAAGGAAATTTACAAGATTAAATAGGAAATGAAACAGCTTGAATTTCAAACCAAATTGTGTTTTCAGAGCTACCCTTAAACTGAACAGTCAAAACTTTTAAAAATAATGGTTATTTCTTCATGCCCCCCACTTGATATGGTTCGATTTTAATGGGAAAATTATAACTCAGATTAAGTGAAAAACAATTCCTTTCCCCATAGTGTATATCTTGAGCATTTGGAATTGTTTATTCTCTTATTGAAATCATATAGAAGGAATGTAGGTAGTGAACATTCTCATGTTGCTTTGTTTAAAGTGTGCATGGACGCTGTCCTCCCCTGGCATCAAGCTTTCCTCCCCAGTGAGATTAGCAGAATTTGGACAGCGTGCGTGATTCCAGGGCCAGGCACTTCACACTTCAGGGTGGGTAGGCTTCACTTCATATACATCCAAATGGACTGGCCATCAGGCCACTGCTCTGGTGGGTCCCTGACATTCCCCCCACTAGGCCTCTGTCTCCATGACAGCAAAATAAAAACACTCGACTTACCAAGAGGTGAGGCGTGTGTGGCCCTTATTTCAGCAAAAGATGACACGGATCTGATCTCTGACCTTCACAGTTTTTCCACCACAGCTGTCCATCAGCATGGCTGGTTTCATGGTGTCTGGGTGCACAGGGAAGGGTGGGCAGAGCGCTTCCATGCCTCTCTGGTGGGTGAGGCCTCCCCTCCAAACACCTCTCACCCGATTGTGACGTGGGCTGCACAGAGCCCAGCACGATCCATCCTTCCGCCCCCGCAGCCGCCTTCTCCTGATCCTCGTGGTCCTCTCCACATGCTCCCCACACAGTTTGGGGGCCTCTCTTGCCCTCATTTTCCTCAGTCTGTCTCAGAAATTAACGTGGCTCTGTACCTCACATGATGTCTTCTTAATACTCAGCAGTAACAACTGCACCTTGCTCTCAGAATCCATAATCCATACTCGATGAGAACAGGGGAAAGGATGTTTTCCGGTACCTTGTTTGCTTCTGAAGCACAAGGATGGATATTAACATCAGAAGCAGTGTTTTATTTTGAGCCCACTTTGGATTATTCACCTGAGTAAACAGGGATTTAATACATGTTTCATACATCCTTTATTCCTCTTATCATGAGAAAAAGCTGTGAAGGAATTGAGACACAGCCCATCTATAAAAATCTGCTTTCGGTTCTCTTATGACGCAGGGCCATCTTTAAAAACTTGGGGGACTGAAAAGAGAAAAGCTGTTCATTAGCTCTGAGTGTCTGTTGATTCCTCTCAGAGAAATGAAAATCAGGTCTTTGCTGGCGTCCAGTCCTAGGAACCAGTGATCTCCAGAACTCTCCTTTCACACAAGTGTTTTTCTGATTCTGTGATAACTCATTAATTACCATTTGGTGATTAAAAGAACATAAAGGGGGAGTATGATTAAGTGTCCTTCATCTTAAACTCCTTTTAAGAAGTTATTAGGGAGAAGTACCTACTGCAAGTCCTTCTGGTTCTAAATGAAACCTCCATCACCTGCTCTTCAGCCACAGTCAGGCCCAAGTGCTACACGTTGCAACAGAAATGTTTGGTTCCTTCAAAATAACTCACTTCCTTGTCACCCATGTATGATATTGTGGGAAGTGCCTGCCCCCCATTATATACACACTTCCTGGGTGCCTCCTTGCATCTGAGAGGACTGGACCCTTTGTGCCAGAGGCTCCATCTCTTCAGTGGGCCGGTGTCCTTCTTGAGGCTATCAGCTTTTGTTATTTCTAAATGTGTAGAAAGGGAAAGAAAACCACATTTACTTCCAGAACTTCTCTTTATGTTTTTGTATTTATTTCTTTTCTGCTCTCAAGAAGGAACATAGGTCTGCAAGACCTTCTAAATTAAACCCTGACAGAGCAATGAAAACATCCTCAGATGACATTCCATGGCTTTCCTGGAGACGTCAGACTCCAGGAGACGTCAGACTCCTGGAGACGTCAGACTCCAAACTTTTACGGCATCACGTTAAAATGGGCAAGTTTAATTGAGACAGCAGTACGCTAATTGGCCTGTCAGCCTCGGAGCTTGAAAAGGCATTTGTTCACTGTTAAATGCATCCTTTATGGTCTGAGAGTACGTTTCAAAAGAGGTTATATAAATTCTTACAAGCATCTTTTCACTCTTTTTTTTTTTCCAGAACACGCTGAGAACGTGATTCATGGCCCCTTAGTGTATAAGAAATAACGTGTGCAGCATGTTATATATGTGACAGACGAGACCCCCCATAACGTTCAGATGTCTCTGCAAGAACCTGTATAAGCAGTGAGGAGACTTTTCCCCGGGAAAAGTCACTGGAATTCCTTTCACTCTCATCTATACCAGGGACCCACTGTAGAACATCTTGGGGTAATGACAGCCCACAGATTCAGGCTGCCTTTCCTCTCTCAACTCATTAGGCTGCAAACGTTCTCCCCCATCTCCGTAATGAAAGTTAAACGACAGTGATAAGCTGGAGAGTGGAAACCTGTGAAAATCCTTCCTTATTTAAATTTGTTGTAAAGGGACCAGCAGCATGACTTGTTTGTTTGCAGGAGATCGTCTCCCTCTTTAAAGTTAGTATTTTTTAAAAGAAGAAACAGGATGTACCTTCAGGGGTCGGGCAGTGACTATAGACCTGCTCTCACTTACACATGGTCCATCAAAAATGTTTCAATGATTCAGAGTAATATTTAGGAGATGTGTTCTAACTCCTATGGTACTGTGATTAAAAAACAGTCCAAGCAACAGAATTATCCAGGAGATAAACATGATGCTGTATGGTTTTAGCAGAGGGAAGTGGGAGTAGAATTTGGCTGACCTTGAACTAAAAGAAATGACCTCTGCCCATTTCTCTTGACAGCAAGGTTACTTGTCTCAACTTCCAGTAATAGAAATCCAGGCAATGTGATCATCCGATTTGCAAGAAACATTAGTGAAATTCTGGGGCATTTGTCCTGTTTTATGTGCAAATGAAAGTTCAAAAAAAAAATTAGGAAGGTGTTACATTTTTCAGGAGCCTCCACTTTTTCAGTCCAAGAGAATGATAAGTGAGTGACCTGTTATGATGAAGTTTCATAGACATAATGAAGAAAGGGAATAAATAGAACCAAGAATCTCCTTATTTCTCAGTTTGTCCTTCAGGATTCTCATAGCATATAAGGAAAATGATTTACCCTCCAAATCTAGAAGGACTTCCAGTGTCATAGATCAACTTTAATTTTTGGTCTGTACCATCAGAAATAACTAATGTCTGTGTTCTTTCCTCTTAGAGCATAATCAATTCTAGATAGGTTAGAATACGTGTGGCTTCCAAACAAAAGGATTCAGAAGTTTAATAAAAAGAAAAATCTGGAATCTTCCATCTTTTCCTTTTATTACCTTCAACATTTTAGGTAGATAGCAAGATTAGAATTTTTCATCAATAGTAGAGTTAAAACCATGGAATCTTAACAAATTTAACCGAGTTGTTTTTTTTTTTTTAATTCATTGCCAGTTCATTTTCACATCAGTGTGGATGGTCCTGGCATCCAGTGCCTCATCAAAATGCTTCATAATGGAAACAAATAAAATTCTGGGTAGCTTTCCATGAGCGGGAATTCAATTGCCAAGAATTCAGCTAATTAATGGAAAATCCTCAGATAGTACTGATGGCTTTTTGAAAGCGCCTTCTCTAAGTTGGCAGTTTTAAAGTGTAGACCTTAATCATCTAGTTAATCCTGCAAAAGAAACAAAACACACTGGTTTGATGCAACTTCTTGATTTGGGAACTTCTTGTTTCCGGAAGCGAATGGTTTAATGCAATACTAAAGAAGAAATCCATCTTTAAAACAGCATTTCACTCACAGAGCCAGTAATTTTCACTCAGAATTGAAATTGTTCAGGAAGTGCCCACCTTTCAGGTCACAGAGACAAGCCCACCACCCCTTCTTCCACAAGGCAAGGCCAGAGCCCACACTGAGCACCCAGCTGCCATGGGGCAGGTCAGGGCTGCAGGCAACACTCCCCCTCCTACTTCAGAAATAGTCAGCACCCAGCACCCATGATTTCACATTGGAGCTTAACACTTAATTAATTAATTTTTTCATGAAATTTATACTTGAATTGTCAGTTTGACACACACACACACACACCCCCACTGGAAAAACCTTGAAAGCAGGGCTTAAATTTGTATACCTCCGCTTACTTTGCCCATGAGGTTATTACACAGTTTAGGACACTTTTTCTTAATAATGGATTATGCGCGTAATGTCAGGTCAATCCAGCATGGGGAGAGCTACCAGCATCTGGTTGGTCAGAGCCACCGATGGGTGCCTCTGTTTTTAAACCATTTGTTGTGTCTTGTAGACAGAGTTTTATGGCCCTGGGAAAGATTTCTTTCTTTCACTCTCCTCCAGCAGCTCAGTCTCTCCATCATCCCACGTTACGAGTCACTCACACAATGGTCCATCACGCCTCTGACCTTCTTAAGAGTTGGCATCTTGACTTCCTTGTGATCGAGGCCGTGATTCTTGCCTTATTTCTCCTTCGCTTTTTGCTGCGGGCTCTCCCTTAAAGACGCAGGGCACCCACCACCACCTCAGTGTGTGCGACGTGCCCTCCTGTACTGCCTTAGTTGGTCACAGCAATGAGATTTGCCCACCTCATCCCACGGCGGGGGGGAAAAAGCAAGAGGCAATGGCAATCAGTGATGTCGGACAACACACAGACTAATTTAGGGGCAAAAGTCTAGTATTTCCAGAGAGGAGATGGGCGGTACTGGTTTACAGTGGCAATATGACCGCGTCACACAATGTTTTCGACCGCTGGCAACAAGGCAGGTTAAGTGTCAGAACTATCACTTAGTTTGTACTAGAACATTTGTTAAACTTTGGAAAACCCTAAGCCTAAAGTCTTGAAAAGAGATATGGAGATAGACGAGCCTAGACATTTTAAAAAATTAAGCTAAGCCGATGTACCAGCAATTCTTATTTCTTCTAAGAATGTCATGCCTTTTCAAGACCTGATGCAAGGAGTAAGATATTTGTGCCTTTTTCTAATAGTGTCTATTATGGGAAAAAAAAAAATCAAGTTGCTTACAGTTTAGACCGCCTTGTTGCACTATAAGCAGCCCAGATTCATAGCCATGGCTCCCCTGCATGATGCGTTGCTTGACTACCTGTGATGAAATATTGTAATGATGGTTTGCCAAGCTTGTATGAATGTTTGAAGACTTTATTTTTGCAGTCATAACCTTGGGCTGGACCTAAGTCTATATATAAACCACATGGTGTCTGTATTGTTTGTAGATGCTGACGAAAGAAAACTTGATCTTTTGATTTTTGTTGTAAGATTTTTCTTTTTATGTTTAGGCTGGTAGTAGATCATTTGCAAATGGTGGTTGATTTGGCATACTTCTAAACTGTATTGTTTCAGCTTGAATATTCTATACTAAACTTTTATAGAGTATAACATGCTAAGTCACTACAAAATTTGTTGTATTGTAAGGCGAGTGTAAACATTTTGTTAATAAAGTGCTATGTTTACAGATAACATATTTGCCCT EMBV3_08107 CACCTTCCCTTTGTAGTCCTCCCAACTCTCATACAGACTCATACACTCAGACACAGACGC Gene BVT0102_229213 + 0 NULL GK000024.2:701272-729250 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139607 TCONS_00139608 TCONS_00139609 1 XLOC_084944 Coding TCONS_00139607 XLOC_084944 Coding Coding RBFA 24:726683-737663 j TSS104387 4136 1 TCONS_00139607_1 237 0.177949709864603 6 0.623827306676382 0 0 4.75197434608188e-12 0 0.000153915983100568 0 6.81994832437881e-06 0 0 0.000849032227438137 3.41940262177182e-09 0.000327048026650843 1.33958383758674e-12 3.90796385628367e-12 2.13955139145148e-12 0.00218413605541342 1.16103941160669e-07 1.06605591552464e-06 0 0 0 0.000898543354458565 0.000982827243042479 0.00105645729907874 0 0 1.3364794697123e-06 0.000450246832417317 0.000110646560332603 0.00140998916991084 NM_001113250.1 RBFA Bos taurus ribosome binding factor A (putative) (RBFA), mRNA. 0.0 2666 100.00 0.3571083172147 NM_024805.2 RBFA Homo sapiens ribosome binding factor A (putative) (RBFA), 4e-140 504 76.10 0.168036750483559 TCONS_00139607_1 sp|Q8N0V3|RBFA_HUMAN RBFA_HUMAN Putative ribosome-binding factor A, mitochondrial; 1e-107 318 67.65 0.991561181434599 1 coding 0 0 0 0 -0.200895434750172 0.235547788852753 -0.0208983326528042 0.70712548838419 CAGTCCATGGGGGTTGCAGAGTCGGACACAACTGAGCACTGAACTGATACTGGAAACCACTGAATTGTACTTTTTAAGAAGGAGAATTTTATGACCCACAAGTCATCCCAGTTGGAGTTCCTGACGAAGAGCACCTCTCGGAGAACCCGGAAGGAAGACCAGGTACGCCTGAGGGCCCTGAACGGTCTCCTCTATAAAGCGCTCACAGACTTGCTGTGCACCCCTGAAGTGAGCCAGGAGTTGTGCGACTTGAACGTGGAGCTCTGCAAGGTCTCTCTGACTTCAGATTTCTCTGCCTGCCGTGTCTTCTGGAGGGCGACCCTCTCCGAAGCTCAGAACGCACACACAGAGGCCGTCCTGCGGAGGAGCGCTGCGCACATGAGGCATCTTCTGATGTCGCAGCAGACCCTGAGGAACGTGCCTCCCATAGTGTTTGTTCAGGACAAAAAATACGCAGCTGTGATGGAGGTTGATCGGCTGCTGGCAATTGCTGATTTTGGACCCCGGGGTGAAAAAGAAGACTTTGTGCAAAGTGACTTCAGTGACCCCGAGGCCCTGGACGCGGCTTCGCCAAGTGATACCCTGGGCCCTGCAGCACACTTGAACCTGTGTGGGATTGACCATGAGGCACTCAACAAGCAGATCCTGGAGTACAAGAGGAGGAGAGAGCAAGGGCATGGGAGCGCCAGCCCCCTGTGGCCAGAGCACGTGGCTGACCTGAGGAAGCAGATGAGGAGGAGGAAGGCCAAGCCCCACGTGGACGATGACCTCTCTCCCAAGAACTATCTGCAGGGTGGGGAGTGACAAGCCCCTGGACAATCAAGGGGCCTCCTGAGGAGCGCGCCCCAGGGTACGAGTGGGGCTCCGAGAAGCAGAGCAGGAACTGAGGTGGAGAGAAAGGACCAGAAGGCAGTGGATCGTGACCGGCTCCGGGCACATGCGCACTGCCGATGCCATCTGCACCCCTTGTACGGTGTTGCAGAGGAGGCCTGTGGGAAGGGTGTAAAACCCTCTTGGTGGATGGCAAGCGGTCAGGCCTCCTTATTTGGGATCCACGTGTGCACGTTTGCTCACGCACTGGTCTCTCCACAGCCCCCAGATCCGTGGCTGCCGTGCTCCCCTGGTCTTCCTGGACGTGCAGACTCGTGGACACTTGAGTCCTGGGAGGCACCGGTGGCCTCTGTTCACAGAGGCACTGCTTTGCCTGCTTCGTTCGCCTCCTACTGTAAACGGCTGTCCTCTCCGCAGTCGGGTTAGCGTCACATTAGTGCCTTTTGATGGAGATGTCAGTCCTGGCCCTGAGTTGCTGATGAGTTGTTCTGAGTGTGAGATTCTGTGCTGTGACTTCCAAAGAGAGTGCGTGTGTTAGATGAGCCTCGTTAGGAAATAACCATCTGAGTCTGACGCAGAGAAAGTGTCCTAAACTTGGGGCGTCTTGACTCACCAGGTGTCAGCCTTGAAGTACTGGAAGTGCTACCAACCCAGTTCAGACGATCGGAGAAGGGTTCCTGTTGAGATACAGCAGAGACGTTTGTAGCGCTGCTTTCAGGGTGTGTGATCCCCCTTCTCATAACATCTCTTGGGAAGGTTGCCCGTATCCCAGCAGCAGTGGCATGGCCTGGATGCTCCGTTCCCTGTCTGCACCTGGGACGAGGGGCAGTGCCCGGCAGGGATGCGGCCCCCACTGGAGGGCCAGCAAGGGTTCTGGGACACCAGCCAGCCACGTGGGTACCCGCTCTGGGCACATGGCTGTGGGCTGGTGCGTGTGGTGCCCTGGAGGGGTGCGGGTACCTGTGTGGTTGTTTCCTTAGGAAGGTGGGTGCTCACACAGACTCTTGTCCAGACCAGAGATGTCCGGAGAGAGGACTGGCCAGTGTGAGGACGTGCACGGGCCCTGCGCTGACGGGCGGTGAGGTGCACGTGGGAGCACCTGCCTTGAAGGACTGTGGGTGCCTCCAGGGTGTTTCTGGTGCTCCCATCTTGCCAGGCTGGAACCAGAGCTCACACACGTGCCGTCGGAGGCTGGAGAAATGCCGTCTCAGTTCTACCTGAAAGTTCATGGTGCTGCTGTAGCCTTCGTGTTGAAGGAAAGCTGTGTCTTCTGCTGTAGCTTCCGTTGGGAGGAAGCCCTGCCCTGCAGCAGAGACAGCCCCAAACTGGCCACGACCAGCGGGATGGCAGCAAGCTTCCCTAGACCTCAGGGCACCTTCCCTTTGTAGTCCTCCCATCTTTCACACTCACACACATTCAGACACACACTCAGCACAGTGTCTCAGTGTGAGAACGTGCATATGCACACACACCTCTACACCTTCCCTTTGTAGTCCTCCCAACTCTCATACAGACTCATACACTCAGACACAGACACAGCACAGTGTCTCAGAGTGAGAGCACACGCATGCGCACACACACCCCTTCCCTTCGTAGCCCACCCAACTGACACTCAGTGCAGTGTCTCAGAGTGAGGGCACACGCATGCGCACACACACCCCTTCCCTTCGTAGCCCACCCAACTGACACTCAGTGCAGTGTCTCAGAGTGAGGGCACACGCACGCGCACACACACCCCTTCCCTTTGTAGCCCACCCAACTGACACTCAGTGCAGTGTCTCAGTGCAAGGCTCTTGGTAGCCTTCCTGCCTCTGGGCCCTGCTTCTTGAAGCTCTGAGTCTTGGTGAGAGGAATCTTGCTGTTTTCCCTCCTAGAACAGCCGTGTATAGTGTCAGGACTGATTCTGTGCCCCAGGTGCAGAGGGCAGAAGGGAGGTGCTGTCACGTTCCCTGGGGATGGCAGCTCTGGGTGCCCACGGGCTCTCCTCTAGTAGCATCCCAGCAGCAGCTCCACTTCCCTCCCTAGAAAACCAGCTCTGTCTAACCAGGAGCTTCGCTGAATATGCTGTGTGAGCAGCAGCTCTGAGTCAGCCGTTCAGTGTCTCACTTTACCCTCTGAAGTGAATGCAGGTAGTCTCACCAGTGTTTGAAGGCCTCAGAGTTTTCAGTAGCTGAAGGAAAAACTTGCACCCTACACTGTTTCATTTAGCTCTGCATATCGGTCCCCAGTTTTATAGAATGCAGGTCCCTGCTCCATTGTCTTCATTTTCAAACTGACTTATGCATAGCACCTCTCAACATGAACTGTGACATTATTAGATCCAGCTTATTAAAGTAAGCTGCTCTGCGAAGAATATGTATGGAAGGAACTCTGAAATGTTCAATAAAGTCTCTTCACTCAGCCCCAAACATAAAATCCCCTCTGTCTCCACTCTGCAGACGGCCCATACACTGGCTTTGGAGAAGCACTTGATGCGGGTTCTGCAGACATGAGTCAGTGAAGTGCAGTGGAGAGAGGCCCCTGTAGGTGACGTGTGTTCTGGGTGGGTTGGGAGCTGCATAAAGAGCAACCAAACGTCATCACGGTTGGCGTGGTGTTGGCGTTCGTGTTGTGTAGACTGGCGTCTCCATTTCCAGAAGCTGAGCTCCTAATGTCAGTCTCTGCTCAGGCCCACGACTTGCAAACTGGCTTGCGGGCTGGATGCCTGCGTCACACGTTATTGGGACCAAGGAGGCTCGGGAGGAGTCACTGGCCCCATCTGTCTCCCATGCTCAACTACTGGGTCTTCAAAGCAGATTACATCAGATACACGTGAATCTTGGTCACAAAGCCACCAGCAGTGGGGTGTGGGTGTTTTAGTGACCAGAAAAGCAAAAGTGGAGGAAGAACCACTGAGAAGTGAGGAAAATCATTGTGAAATCCTGCCTGAATTCTAGACGTAACTGTCAAAGCCTGGCAGGGCTGTCCATGTAACAGAGCTCATAATAGTATGCTAACTATTCTCCCCCCAAAATGAGAGAACACTTACCAAATTATTCTAGAAGGCCAGTATAACTCCAACACCAAAGCCACACACACTACAAATAAAAGTGAAATCCAGTATCCTTTATGAACATTGATGTGAAAATCATCAACAGAATACTAACAAACAGGATTCAGCAGCACATCAAGAGGATTAAACACCATGACCAAGTGGGATATATCCCTGAAATGCAGAAGTTCCAACACACGAAAGTCATCAGTGTTACATGCCACATCAACAAAGTGACAGGAAAAACCACATGATCTCAAATGATGCAAAAAAA EMBV3_29597 TTGGACAGGAAGAATGTAATTGCCAAAGCAAACACGGCCGGATGAAGATGACACTCCAGC Gene BVV0102_177230 + 0 NULL GK000027.2:3761695-4313368 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156750 1 XLOC_095210 NonCoding TCONS_00156750 XLOC_095210 NonCoding NonCoding - 27:4228688-4228977 - TSS117075 289 1 TCONS_00156750_2 86 1 0 0 0.000243387805873143 9.60623005985217e-05 0 0.000273338026307019 0 4.03578314978589e-05 0.000409322760144478 0.000491427214783554 0 0 0 0 0 0 0 0 0 0.000372193521494984 0.000821167188054756 0 0 0 0 0.00232548216836021 0.000463196984151514 0.00018246446071917 0 0 0 0 noncoding 0 0 0 0 -0.0307361598574677 0.818441371186206 -0.00379598232254774 0.944663266410517 ATAAAATCATTTAATGTGATTTGACAACTGTATGCCTCAGCAATTAATTAATCTTGTTACAACCCACCGATCGATAAGTACAGAACTAGCACTAACTGATGATGACATCACGCCTTCGAGGCTATGGCTGGTAGGTTATTATGCAGAAGAGGCTGGGCCAGCTTGTGCACCTGCATGGTCTGCACTGCAGTCAACAGTCAGTGAAGCGGCAAGTGCGGGCGAAGATTCCTGGCTGGAGTGTCATCTTCATCCGGCCGTGTTTGCTTTGGCAATTACATTCTTCCTGTCC TCONS_00154824 . 5' 84074 TCONS_00154824 . 5' 84074 EMBV3_16504 TTGCAGTACAGTACAGAATAGGCACTTGGAAACCCTCTCTTTTTTCACCAGAGACTATGG Gene GeneID:526585|F2R:NM_001103097:18_cdna Constitutive 1 NULL GeneID:526585 10 GENE F2R MGC152489 PAR1 coagulation factor II (thrombin) receptor EMBV3_30088 TGATGGTCGTGGTCATCTTCTGCCTGCTGAACCACTACAGAGTATCCACCCGGTCCTTCA Gene GeneID:511553|LOC511553:XM_002697753:269_cdna UTR3_Alt 3 NULL GeneID:511553 24 GENE LOC511553 NULL similar to Uncharacterized protein C18orf1 EMBV3_43193 CTGGGTTACTCATCACCTAAGAGAAATCATACACTGATCACCCCTTCCTCCAGACAGGCC Gene BVV0102_077924 + 0 NULL GK000030.2:91546247-91602656 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164999 TCONS_00164998 1 XLOC_100378 NonCoding TCONS_00164998 XLOC_100378 NonCoding NonCoding - 29:33431162-33433690 - TSS123331 2417 4 TCONS_00164998_2 42 0.439801406702524 2 0.0443213296398892 0.000112571765225793 0.000248566226906515 6.32016867249356e-08 1.56296127946452e-53 0.000106575297416345 1.31280590520338e-18 8.72343130844724e-05 0.000299595817551667 0.000116992945073714 1.0995651608803e-09 1.32569162030195e-05 0 0 1.76443603075029e-28 2.04779613756517e-05 0 4.51579152994922e-14 0 0.000642966120789353 0.000379660690088442 5.38909446172891e-21 1.9179938996813e-05 0 0 6.08030169960426e-20 0.000363198235305712 9.56382637617029e-20 1.18982983445393e-32 3.32611031563367e-21 1.31020347963245e-15 XR_232508.1 LOC101902488 PREDICTED: Bos taurus uncharacterized LOC101902488 (LOC101902488), 0.0 695 91.13 0.197352089366984 0 noncoding GCTCACAGGTATTTTTTCCTTTTCTCTGAGTTTGATGGTTTTCAAAATAAAAAGTTTACGAAAAACATTAATGACACAGACATAATGGCCTGCCTGAGTGAGATAAGCTGAGCTGCCCACCTGTGAAGGACTGTAAGGAAAGGAAATTGACACATTCCCCTGCCTGAGGCCTGCCATTCTAGGAGACATTTGCAAGGATTGAATAGTCTTTTTTCTTTGTTTTCTCATCTCCCCTCATCTCTGATCCTTAAAAGAACCTGGCAACCAGGCCCTGGTAAGAATGGTTATTTTGAGGTGCTAGCCTGCCATCTTCTCAACTTGCTGACTCCCGGATTAAAAGTCTCTTCCTTGGCCTCAACTCCTTGCCTCTCGGATTCACCTACAACACACACCAAGTTGTATAGCAATGTTACTACAATAAGAAACAAAAGTGAATTTAATAAAAAGTGTGGGAATGAGACACACCCTTTTGGGTGTTTATGCTGGCACGTTCTTATTCTATTCTCTCATTTAAAGTTAAGGTTCTGGTTCCAGGGTAACCGCAGCAGCCCAGAGGAAATCCTGCCACCTTGTGACCATTCTCCGCCATAGCAACCTGGAAATGATTATAGCCGCTTAATAATCACAACTGTGGAGTGTAAAGATAGCTACCCTCAAAAACCCTCAGGAGTAACTAATCAAACAAAAATGAAAAAAAGCGCAAGCAGAAGTGAAGAAGGAATTCATAGGGCCTGGACTCCATCTTAGTCCTGTTCATGCTGATCATGCTCGGCCACCTTTCCAATGGACTCTGAACTCTGGTGCCTATGAAAACAACAACAGAAGGAGAAGACCCCCTCCAGACAGGGGAACCTTGAAGATCCTATCTAGGTTACTCATCGCCTAAGAGAAAACATACACTAATCACCCCTTCCTCCAGACAGGCCATAAATTCTTCTGTATCAATCGGAGTGTAACCTCGGGTTTATTGATTATTGGCTAACTGACTGTTTGAGCACATAGCACGTGAATGATGGGGTTACTGGGATTGTATTTTCCTTGGTTTATGTAAGTCTCAAGGAATTTGGAGTGGTGGGTTCAGACACGTACACACGGGGTGTAAAAGATTTTCACAAATGCTGGTCGGGGTCCTTGGCTAAGAGGAGACTCTGCCTTGGGCCCGTCGGTGTGATAAACTGCACTCCACTATCTGCATTGTCCTTCTGAGTGAGTTTGTTTCCCGGAACATGTGGCTACAACAGAAGCAAATATCAATAGGAAAATGCAATTCACAAAGTTTACAGAGAAAAGCATATGAAAATGTGAACAATGTGACGAATTATTAGAGATAAAGAAATCAAAACGACAATGAGGTTTCACCTCAGGAATGTGGTTAACAAGGCCATCACAAAAAAAAAGTGCAGGAGAAACGCTAGAGTGGGGTTAAGGAAAGGGGACCATTTCACGGTGCTGGTGCTCTGTAATTGGTAACAGCCATTCTGAGGACCACTGTGCGAGCACGCAGGCGCACGCATGCGTGGTAAACACGGAAGTGCCGTATGACCTGGCAGTCCCACTCTTAAGGGTGTAGGTGGACAGAATTGGATTCGGAAAAACCCATACACACAAGCGGACCGGCTCAAAATCGGGAAAGGAGTACAACAAAGCTGTATATTGTCACGCTGCTTATTTTACTTCTATGCAGAGTACATCATGCGAAATGCAGGGTTGGTTGGATGAATCACACATGGAATCAAGATTGCTGGGAGAAATACGAATAACCTCAGATGTGATCTATGATATATTGTGCAGTTATTTAAAAGGGTGAATTAGATTTACATTTGTTGGCCAGGAAAATAGTCATCATGTATTGTTAAAATTAGAAAGTCTGCAGAGTGGTGAGAGAGATTTACTCTCAGATAACTCCCTGATAACTGCGGTTTCATATTCTCTGTGAATTTGACTACTCGGAGTATCTCTTTTAAGTGGAATCACACTGTATCTGTCCTATCATGTTTCACTTATTTGACTCAACATAATGTCTGCAAGGGTTTCCCCAGTGGCTCAGCAGTAGAGAACCTGCCTGCCAATGCAGGAGCTCCAGGAGATGCAGGTTCGATCCCTGGGTCAGGAAGATCCCCTGTAGGAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACCGAGGAGCCTGGCCGGCTACAGTCCACAGGACGCAAACAGTTGGACATGACTGAAGCAGCTTAGCACACACATACACACTGTACGTATGCTCTACAAAACTTGTGAAAAAATAAACAAGAACTCTGTTGCCAAGTATAATTGGATTCCAACGTGGACTATGTTGGAAACTTTGGAAACTGGGTTTGAAGAATGCCGGTGCTTAGAATAGACCCTGACATGCTGAGATCCAGGCCCTGGATTC TCONS_00165005 TCONS_00165006 TCONS_00165007 TCONS_00165008 TCONS_00165009 s 3' 112764 TCONS_00165005 TCONS_00165006 TCONS_00165007 TCONS_00165008 TCONS_00165009 s 3' 112580 EMBV3_20660 ACTGTATTCTTTCGCGTTTTTTCCAGCTTCAAATTTTCCATGAGGTAGTTATGAGTGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27759 AAGCCACCGCAATGAGAAGCCCACACACCACAACTACAGTAGCTCTCCACTTGCAGCAAT Gene BVV0101_003288 + 1 EMBV3_01697 GK000006.2:92241547-92297158 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34130 TTCCACAGTCCTCGGGCTTTTTCTAAATGAAGCTTTACTGGTCTCACAGCCTGGTCTGGG Gene BVV0102_272489 + 0 NULL GK000007.2:43740454-43784856 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14362 CGTGTGTGTGGCAGAGAAATTTTACAGAATCTAGGTTGGTGAGGAAGAGCCTGCGCTGAC Gene BVV0102_102514 + 0 NULL GK000016.2:3194110-3208943 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068519 TCONS_00068517 TCONS_00068518 1 XLOC_041716 Coding TCONS_00068518 XLOC_041716 Coding Coding ELK4 16:3200792-3219934 = TSS51287 9776 1 TCONS_00068518_2 432 0.0146276595744681 5 0.489525103181652 0.00140463132500628 0.00176991854507508 0.00172942095620603 1.32311261051647e-08 0.00154847041869869 0.000306019931013946 0.00114422185270397 0.00178240100587171 0.00184364542957911 0.000232584753774125 5.72181176216592e-05 3.99723916344027e-05 6.28260470244339e-05 0.000115390485768136 1.48934329736503e-07 0.00178108835504472 0.000357142447995984 0.000921813792334761 0.00200286010728819 0.00282216519309588 0.000814447680650754 0.0006702246422141 0.000548445895993486 0.000803350024242604 0.00237826649416427 0.00243960150423681 0.00117742894204651 7.6970126410451e-05 2.94972765893272e-05 7.49397105014503e-05 NM_001081612.1 ELK4 Bos taurus ELK4, ETS-domain protein (SRF accessory protein 1) (ELK4), mRNA. 0.0 2926 99.94 0.166121112929624 NM_001973.3 ELK4 Homo sapiens ELK4, ETS-domain protein (SRF accessory protein 1) (ELK4), transcript variant a, mRNA. 0.0 2704 82.94 0.260433715220949 TCONS_00068518_2 sp|P28324|ELK4_HUMAN ELK4_HUMAN ETS domain-containing protein Elk-4; 0.0 736 90.05 0.997685185185185 1 coding 1 1 1 1 0.421171430119251 0.0819259014964376 0.00530551901834449 0.933588220690558 GCGGGCACCCGGCGGGCTCGGCTCGGCCGCCGGCGCCTTCTCAGGCTCCGCCGCGAGGGTCGCAGCGGCTGCCGCGCCGTCCTCGAGTTCCCGGCGTGAGGAGAGGAGCGTCTTGTTGGAGGCGGAGACCCGGAGGGAGCCCCGCGCGTGGCCTCGCTCATTGCTATGGACAGTGCTATCACCCTGTGGCAGTTCCTCCTTCAGCTCCTAAAGGAGCCTCAGAACGACCACATGATCTGCTGGACCTCTAATAATGGGGAGTTCAAGCTTTTGCAGGCAGAAGAGGTGGCTCGACTCTGGGGCATTCGAAAGAACAAGCCTAATATGAATTATGACAAACTCAGCCGAGCCCTCAGATACTACTATGTGAAGAATATCATTAAAAAAGTGAATGGTCAGAAGTTTGTGTACAAGTTTGTCTCATACCCAGAGATTTTGAACATGGACCCAATGACAGTGGGCAGGGTTGAGGGGGAGTGTGAAGCTTTAAGCCTCAGTGAGCTCAGCAGCAGCAGTTCCAAAGATGTGGAGAATGGCGGGAGAGAGAAGCCACCACAGCCTGGTGCCAAGACCTCGAGCCGCAATGACTACATACACTCCGGCTTGTATTCTTCTTTTACTCTCAACTCTTTGAACTCCTCCAATAGGAAGCTTTTCAAATCTATAAAGGTTGAGAATCCGGCTGAGAAATTGGCAGAGAAAAAGTCTCCTCAGGAGCCAACTCCATCTGTTATCAAATTTGTAACAACACCTTCTAAAAAGCCACCAGTTGAATCTCCTGCTGCCTCCATTTCAGCTGGCCCGGGTATTTCTCCATCTTCAGAAGAAACTATCCAAGCGTTGGAGACTTTGGCTTCCCCCAGACTGCCTTCCTTGGAAGCACCAACTTCTGCATCAGGAGTGACTGCCCCTTTTACCACCACACCTCCTGTTTCGTCCGTGTCCCCTCTGCAGGAGCCTCCTAGAACTCCTTCACCACCGCTGAGTTCCAACCCAGACATGGACACGGACATGGAATCAGTGGCTTCTCAGCCAATGCAGCTTCCAGAGAACTTGTCCCTGGAGCCTAAAGACCAGGATTTAGCTTTGCTAGAAAAGGACAAAACAAATAATTCATCGAGGTCCAAGAAGCCCAAAGGGTTAGAGCTGGCACCAACCCTTGTGATCACGGGCAGTGATCCAAGCCCACTGGGAATATTAAGCCCATCTCTCCCTACAGCTTCTCTTACGCCAGCGCTTTTTTCACAGACACCCATCTTACTGACTCCAAGCCCCTTGCTCTCCAGTATCCACTTTTGGAGTACTCTCAGCCCTGTTGCTCCCCTGAGTCCAGCCAGACTACAAGGTGCTAACACACTTTTTCAGTTTCCTTCTGTGCTGAACAGTCATGGGCCGTTCACTCTGTCTGGCCTGGATGGACCTTCTACCCCTGGCCCATTTTCCCCAGATCTACAGAAAACATAACCTATGCACTTGTGGAAGGAGAGAATCAAGGCATAAGGAAAGAGAAAGACATTCAACACGATTACATTTAAAGTGAGGGATTGATACTTCACAATGCTGATAATAGACTGTTATGATTTCTGCCGTTCCCCATTAAAATGCTTTTTAGGATTCCCTTTGAATAGGACTCAAGGTAGACTGTATATAAAAATGCCTTAATTGGAGTCCAAACTCCACCTTCCTCTTTCTTTCTTTTTAAAAAATATTTTGAACCTTGTGTTAAGGAAATTTTTAATGGGGTTTAGCAGCAAGCTATGCTTTGCAAGAGAATTAAGAACAAAGTTATTCCTCTTGCCTTATTGGGACCCTTTGGCAGTTGTGCTTTGAGCATATTATATAAAGAAATACTAGTTAAATGAAATTAGCCTTATCTTTAGGACTTACATGTGCTCTGTTGAATGCTAAAAGTGAGTTGTGCATAAGCAGTGGAGGAAAAAGAATCATTCCTATTCACACGAAATAAGAATGGAGCAGGACTATTGGGGATATTCTGTTTTGCTGTGAAGTATAATCTATGTAAGCAACTCCACAAACAGTTACCTTATTTACATTTATTCAGGGTGGTTCCCTTAGCCCTATGTATGATCTTGCCTGAATCTGAACAGAGCATGGAGCTAGTTTATTCCCACATAAGATTTTTAAACCTGGGGCTTAAGGCAGTATTTGGAACAAACAGTGAGAATATGGGGCCTCATATCTGGCACAGAAATGTCATCTGCTGGTATGATTCCACACCCATGGAATACTTATGGTAAATGATGGCTTTTAGGGGGATGAACCTGGGATTTGAGAGTCTGAGGCATCTCTAAATCAAGGATTCAATTGAAAAAACTTGAAACATGTAGGCGTTTCCCAGTTAGAAGATACCCATTGTGAAGGACCTTTTTTTCTGTTCGTTTTATCCCATTTCGTACTATTTATTTATCTTTTAAATTTAAAGTTGTTGGAGGTTATGATAGTTTTAATTAGGAAGATGAAATGCAAAGTGAACTCTTTAAATCTGTAGTGAAGTAAAAATACACTTGTTTTTTTTTTTTTTTTTTTAAATTAGGAAGTAGCAAAGCTCATCTGGAAGTGCTCATACATAGGGACTGGATTATTCATATTAGTAGTGAAAAATGTAGGCCTTCATCTCTGCCAGATTTGTGAAATGTTAGCATATAGTCATCACTGCCAGGTACAGACAGATTTGTTGAACCCCTAAGCTGATTTGATGCCAACATCACAGTGGAGTCTTTTGAAAAATTTGGCTTTAAAGTCCAGGATTAGATGATACGCTGCAGCCACCCCTCCGCCATCACCCCTGCCCATTAAACTACTCTTTTAAGCCTAGAAATAGTTCCTATAATTGAACAACTTGAACTAAATGGTATACGAAAGTAGTAAAGGACTTGAGGGCTCAAAGTGACACTGCTATAAACCAGCATCTCCCAGTTGTATATGTTTGCTTGAAATTTGTTTTATACAGGATAGAGAAACTCTGGTATAAGATGCCTGTGCTAGTTCATTAGTAGCAGAAGGATGGTATTCAGGGAGCTGCCTTTATATTTGTAGTGTTGGAGACCTGTTACTGTTTAATTGGTGGTTATCAGCTGAAAAGTTCTGTTCCTGAGATGTGCAATAGTAGTGTTTGTACTGTTCAATAGTGATGGGGAACAGACATACTGGATTTTTTCTCCCACATTGAATCATGTAGTTTGCATGCTTTTTTGAAATCAGACTGCTCAGCAGCGCTTTGGACTAGTTTTATTAGGTTAATTCACATTTTATACATTAGATAAGTAAATATTGATGGCTTGATTTAGTCTTTAAAATTTTGAAAGCACAAAAAGTATTTTATTTTGAATCAAAGGAGAAAAGCCATTGGTTTGTTTTCACAGATAGTATCTTTGATAACGAACTGTTTCAGTAAAAGGGTGCCTGGGAACCAACAGCACTATTAAAACTCAGTCAAAGCAACTTCCTAGGAACCAGTTTTAGTGAGTCCTCTGCCTGTAAACCTCTCCTGGAAGTCTCTGAGAGGTGTGGGCCTTACGAGGTTGATGATGATCTGCTTTTTCTTTGAGATAACTATTTAGGGGAAGCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATGTTTTTAAGTGAAATAAAACTGCAACCATAGTGAAGTGTATGAGGCAGGCTGTTCTATTTGTAAACTACCTCCTTCCTGGGAAAGTCTGATTTTGAAACATCCACAGAGTTCTTCTTAGCATCAAAAGGTGACATACCACTTCAGATCAGTATTCACTGGAGAGGCTTATATTTGGTAGCTGTAGCTGGTATCCATCACTAGTCACTTTGCCAGGATGAATGCTGGTAGGCAGAAGTAGCCCAGGTTAAAATAGGAGAGCAGGTTTAGTGAACTTTTGCAGCTTCTGCTGTGATTAGCTTAGCTTTTCATTTGCTCTGGCCGGTATCTAAATCAGTTGTGTGCTGGAAGTTGTTTAACTACCAGGCTGTCTGAAGGGGAAAAGGCCTTAAATTGTAGCATTTGCTGAGTCCATTCTGTGGTGTAAGTGACTCCCCTGTGGCTGACTTCAGGCCACCACCTTGGAGCTGAGAAGGGATGCCCACAGGGGGCTCAGGTCCACACACTCAGCCAGTGAACCACTGCATTTATTCTGCCCTTGGGTGGATTGTCACCTAATTTCTAAAATAATTTTTTCCTTTTGGTTTGTCATAGTGCTTTTGTGATGTAATACTCTTCATGGCCATTTTTGTATTCAAACAAAGGTGGAAACTTCCATTGATTTTTGAAAAAATTTATACATGATGGAAGAATCCAAAAACCCTCAAAAGATCAACCTTAAGCTTCTTAGAGTTAAAAGTTAAAATATAGGTTTAATTTTTCTGTATTTTGGTGGCTAAAATACAGGTAATGTGACTTTTTCTTTAGATTTTGATGGGGAAAATAAGCCCATGAGCCTATATAGTGAAATGGAACTGGATTTTTTTTTTTTTTTTTTTACACTGGATTTTTTTTTTTTTTTTTACACTCAAAGAATTCCTTGAAGATTTACATACTCTATTAGAGATCAAAAAAAAAAAAAGAGGGCTAGACTGACTGTTCAATCTATTTTACACGGCATGATTTCTAGTTTTTTCATCCTGTGTGTCACTTAGGTTTGGAGGGACATGTAGGTCAGAGGCTTGGAACTCTGGAGCCGAAACTGCAGGCTGTTGATGTTACACTGTACTGTCCACTCTGATGACAGTATTTCCTGCTGATCTCAGAACTTGTGTTACGATCCTGAAGTTCTCAAAGTCAGTTCTAATGAATTTAGGCCCATTAGAGCCACTCCTTGGCATTTCAGAGAAACATTCTCTAAGCTTTTTGAACACACACCTTGATCAATAAAAGGCTTTGAACACAATCCCCTATTGCAAATTTGTGTGTATGTTTGTTAGGTTATGTACTGCTAAACACAAAAACAGAAATTAAGGATGATATAAAAATAAATCTTGAGTAGAAATTCTGATGTTCTTCCTGCGTCCAGTAGATTGTGTTGTGCACCCTCTGGGGCACACTCTGCTTTAAAGACCCCTGACTCAGCATATTGTTCCTCAGTCTGATCTTGAAAAAAAAAGTTTTGGTTGTGATATATGGGGAAATCCTTTACATATTTGATCTGATTTTTATGTAAAATCTCTAGAAGAGATTAGGAACTTTTCAGCAGAGCTTGTCATCAGCTTTCTGAAATTTGCTCTTTCTTTTTCATACGTTGGTAAATAACCATTACCAAATGTTTTACAGAGCTTCGTGCTTACTGTTTGTTGACAGTGTGGCTGTCTCTTTTCCTTTTCATATTAGGTGACTTTAAAATTTACTGGCCATTCACAAATTTCTTTTGGCCTTATTATTATTATATTTTACCAACACTTTCAGAATTACTTCAAGTTGCTTTGTTTTAAAATACATAACAACTCCATTTTCTTGCTGCATTACTCAGTTTTTATTATTATTATTTTGGTAACATTTTGGTGTCTGAAGAAATACTTTCTTGATGAGCCTGTTCTGTGTATCACTTCATTTACTGTATATATATTTTATTTGCCTATGCCAGAAATGTAGAGTTGTGCTGAGGTACCATTCTTAGCTATGTAAACAAGTATGGTGACAAGTGTAGGTCTCTGTGCAGAAGCCTGGAGTTCTGAGTGAAGGACCGCTTTCCAGTAGGAAAGCTAGACTCCTCACAAAGTTGGTGGTCTGTTATCTGAGGGTGTGATAGGCCGGAATTGAGAAGTTAATTGTTCAATTCATAGTAATGAAGTGGAGGCCAGCCATGATTGTTCCAGCCAGGTACTCTGACCAGAGAATCAGTTGGGTGGAAAGTGTTTTGTTAGTTATCTTCCTGGTTTTGGGTCAGCAGAGTGTTTTGTTACTGTATTTAATGCTGCTTGCATTGCCTGAAACAAGGTGTCTGTTATTCTTCTGTGTCAACAGAACTGTGCTTACTGAGGTTGAAGTTTTAATCTTAGAATCTAGAATTCTTGTGGGTGGTGGTGTATTAAGCAAGAAGAGAAGGCGGTTTGATTTCATTTCTCGTACTTGGTGGAACCTGTTAGAAGGAAAGTCATGTTTTTACCTGTAAATGGAGCAGATCTGAAAAGGTGAGTTGTTGATGTAGTATAAATGTTCCATTTGAAGCTGCCGGTTTCTTCAAGCTCCTTTTCTAGAAGAAAAAAAAAAAATTGTGATAGATTGACAGCCTGGCAGAAAACAGTGATCTCTAGGGTGCTGTGATCTGCACTTAGCCATTATGAAAATGGAAATGAGAGTGGTTTATCTGAGAGGGGCAAGGTAGCTCTAAGCTTTCTATAGAAACCAGGAGATTCAGGCAGTTGTTAACATTTTCAGTGATACCTTTAACAAGAAAATTTATGAGGGATACAATCCAGCATAGAAAGTCTCTTGAACTCTAATCTTTTGAGTATAATACACATCAAGAAGTTTTATGAGGCTTAAATTTTTATTTTAAAATATTTAATTGGGAAACCAGAGCATTTTTTTCCAAGTCATTCTGATTGGCTGAGTGCATGTGTATGTGTACTGATTATTGACTTGAGTATGTGTTTGTATGTATGTGTGTAAATAAATCTATGTTTCAGAGGGAACATGGTCATCCTACTCTAGGATGGTTCCTAGGCTATTTTATACTAAAACTTCAGAAAAAAATTGGCTGCACTTTGCAGTTGTCACTTTTTAAAAAATAAATGCCTTGCACATTTCCATTTTTTTAAATGCATAGAATCATAGGCCTTAAAAATTGCTTGTCAACATTTTAGAAATTCTGTATAGTGCTACCTGTGATATACTTTAAGCAAAGTCACCATAAACTGTTCTCTTACGTTCATGTATTATTGAGCAAATAAGGATGTTCTTTCTATAAATTTCTACATTTTTGTGTAAAATCCTTGCTATATTGTGTTCTAAGTTTCTCAGAGAGGATGTTTATACCAGATGTAGTATTTCTAAAATACAGCTCTAACCATGACTGAGCTAGTGGTGGAGAGATTCTGGCACTGTAGCCTGTTTATCCTTTTGAACTATACATAGAAAGCATTCACAGAAACCTCAGAGTATCTTGGGCTGCATGTTCTTAGTTTTGCCTTGTTTCCCATCTCATCAGGGCCCATGCTGGTTCTTGTCCCCTCCAAGGATTATGAGCCCTGCGAAGACAAGGCCTGGGATCTTCTGGACAAGTTTGGGGGGTGGGGGTGCCCTGTGGTTGGGCCTGACTTCTAGTTGGTGGAATCGTTCAAGCCTGCCTAGAGTTCAGGGGTGGGAATGCCATGTACTGGTATGACATTCATTACTTGGCACTTTGGGGGCACCATTATTAGCACTGTTTCATTTTTTAATAACTGGAAGCACTTAATGATTATTTTGTTTAATTTCAACTTAAGGATATTGAGGGTCAGGGACGTTAAGGTTTATTGTTTATACTTTCTGGAACTTAAGACTATTTGGATAAGGGATAAATGGATTACCCAGTGAGCCATTCTAGGCCCTGCAAGGTATGCTCTTTTGACTAGGATGCTTTAAAAAATTTACAATCTTTTAATATTGTGCTTTTGTAAAAATGTATGACTTTTAATAATTTGCAGTTGGTGCATTATACTCAACTTTGTGAACTTGCCAACTTTCTTTTCTGTTTAATCATTGTTGCTTATTGTCTATCATGTAGGGGACATAGTTCCTTCTAAGACATTTCATACTTTTTGTTTTTGATGGCAGTATTACCAAGGGTGTTTATGTGTACATTACATTCATTGCTTATGTGATAAAGGAACACCAACATATTGTATGAATTTCCCTGTTCAGTATTAGTGAAATTAAGATACATATATGTGAAATTAACTAAGATGCATATATGTAAAGGCAGAAATGAATACAACTAATTTTTGATTACTTGAGGCCTATTTATTTGGTTTGGCCATTCAGCCTTTTCTAGTCACAATCATAGGTATTTTTTTCACTTTTACCTTCTAGCAGTTTCATTTATCTTTGTGGGTAGAGAAGATTAAATATGAAACTCAGTCCAGTCATTTTGCTACTGATGGGCTTTGGATTGAGGCAAATACAATTTTCGACTAAAACTAGATTTTTAGAATGAAAAAACTTTTCACTAGATAATCAAGTTGACTTTTTAAAAAAGTGTACAATCTTGTGTTTTGAAGAACAAATAATTTTCTATGAGTCCTACTGGATCTTCAAGTGTGGACATCACTTGAAAATTAAATAATGTTAAACTTTTGATTTTCACCCACTGAATCTGTAAGTCAGAAAGAAAAAGCACGTCTGCTCTGGTGTTAACACACAGAGACGCATCCTTTACATCATGTGTCTCAGCTTGCCTCTGTGGTAATGAGAACTTGTCAGGGTGCTCTCCTCAGACCTTGATTCTTTCAGCTGTGAAGACAGTTACTTCATTGTTTATTTTTCTCCTTGTTTATTCTGTTGAAATCTGTCTCTCATAATATCTAGTATCCTCTACTCTTGTATAAACAGAATACTTACATAGAATGCCAGTGTACACCTACCTACCCAAAAGACTGCATTACTGCTAAAGTGTCATTAATAATTTGTCTTGATTAACTTCAGTGTAACTTACATGAGGGAGACCTTCAAAGTATTAAAACCACATTTCTTTTCTTTTTCCTAAAACAATTCAAGTGACGGTAACTGCCTACACATTTATTAAAATCACATCAATCATTGATGCAACTGGAGAGAGACTGCCACCTCTCTAGCCGAGCAGTCTGACTTACCTGTTGGGAAACTAAGGAGTGTTGTCTTAAGGTGATTAAGATTAGCCAGAGCCTTAGCTCTACGTGTGTGTGGCAGAGAAATTTTACAGAATCTAGGTTGGTGAGGAAGAGCCTGCGCTGACACTTTGAGGGCTTCAAAATATGCTGCTTTTAAGAGGAAAAAGTGTAGTTAATACTCAGTGCATCTCCAGACAGAGTAAGGGATTGCTCTGAAAACTAATCAGGTGATCTTTGTTTTCTATTGCTTCAAGTTTTATACAAAATATTGTTAAATTCTGTAATGATGATATGCATCTTTTTAGAAAGATAATACATTTTAAAAAACTATTTTATGTAAGAACTGACAGAGGAATTTGCTTTGTATAATGGCAAGCTGGCTTTAAGAAAGCACTGTATCAAATTTACTAGTCCAAAATTATATAGATATGTTAATAGATGTATGTGCAACTAGATATGGACAATTGTATTTTTTTAAATAAATATTTTTAATAAAATGACTTTCTGAATTACTTCCCTCCTTTCTCATCTATTGAGGTGGTCTCTATGTATTAAATTTCCGTCTGTGCCAAATGTGGATAAGGAAAGTTCAGCTTTTCCAAAGGTTATCATTAAAACCTGGCCTTCAGCTATTTGATATATATCTACATTAAAATATTTAAAGCCTGTGTTGAGATAGGTAGTGAAAAGAGGAAATTGTAAAATGATTGTTGATATAAAAAGGAATTAAAAGAATACTAACTGGCTAGAAAAATTATTTGCCTTGTGAAATCTTTTTATTTTGCTTTTAAATTTTACTCACATTTTTCAGTTCAGTTCAGTTCAGTTCAGTCACTCAGTCATGTCCGACTCTTTGTGACCCCATGAACCGCAGCACGCCAGGCCTCCCCGTCAATCAATGACTCCTGGAGTCTACCCAAACGCATGTCCATCAAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTCATCCCC EMBV3_31843 AGAGCTCTTTATACGTTTGAACCCAGAACTATGCAGTCCGATCATTAAGCAATGCTGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15257 CCGAGAATAAATGAAAAATAGACCAAACATCCAGCCCCAAGACAAGGCTGCACCTCCAGC Gene GeneID:100335527|LOC100335527:XM_002696771:454_cdna UTR3_Alt 2 NULL GeneID:100335527 21 GENE LOC100335527 NULL hypothetical protein LOC100335527 EMBV3_23301 CCATTTGCAGCAATGTGGACGGACCTATAGAATACTTATGCTTAGTGAAACAAGTCAAAC Gene BVV0101_024748 + 0 NULL GK000009.2:16429510-17301714 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12799 AAAGATATACAAGATTCCCTAACAGTGTCTACTGCCATCAGTGAGAATTACCAGACGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07229 GAAATACACCAGCACAAGTGGGGACGGGGAGAGGATGCAGGAAAACCTGGTATGGACATT Gene GeneID:533228|RILPL2:NM_001083718:234_cdna Constitutive 1 NULL GeneID:533228 17 GENE RILPL2 MGC151657 Rab interacting lysosomal protein-like 2 EMBV3_00935 TCTTTGGCAAGACCAAGAATGGAGGTGGTGACGTGGAGATGAGGGAACTGTTGCAAGGGG Gene GeneID:510697|IFI35:NM_001075462:109_cdna Constitutive 0 NULL GeneID:510697 19 GENE IFI35 MGC152255 interferon-induced protein 35 EMBV3_08636 AGCTGAGCCCTACCCTGCAAGATACCAACTTCTCCTGTGTTTTCATGGATCCTGGGCAGA Gene GeneID:617470|IL18BP:XM_002693432:61_cdna Constitutive 0 NULL GeneID:617470 15 GENE IL18BP NULL interleukin 18 binding protein EMBV3_38461 GACTCCTGAGCTAATAACCCATGGCCTCCAGTTTAAAAGGACATACATGTTCACTGCCAC Gene GeneID:538219|ARHGAP26:XM_002689271:11_cdna Constitutive 0 NULL GeneID:538219 7 GENE ARHGAP26 NULL Rho GTPase activating protein 26 EMBV3_02862 ATGATCAGATAAACTCTGTGCTTCATTTTAACTAAAACTGGAATGTTCCTGCAGGGAAAC Gene GeneID:614612|SRD5A1:NM_001099137:38_cdna Constitutive 0 NULL GeneID:614612 20 GENE SRD5A1 MGC143201 steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) EMBV3_30055 TAGACTCAGAGACAGGGAGGAAGGGGGTCACAGAAAGGTAGAAATTAGAGAAAGGCAGCC Gene BVV0101_041629 + 1 EMBV3_09002 GK000005.2:110187073-110213000 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31287 TAAAGACTTTTCTTTTAAGGCCGGCCAGTGTGCACCCTGGACTCTGAGGTGGCTGTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42914 GAGGAGTGCGACCCTGCTTCGGTAGCCCATGGGGGAGGAAGCAGGGCGGAACGATGTGTA Gene GeneID:100313115|MIR2286:NR_030836:22_cdna Constitutive 0 NULL GeneID:100313115 1 GENE MIR2286 bta-mir-2286 microRNA mir-2286 EMBV3_10222 TTACGGAACAGGCTGACGGGACACTGCTGGACTCTGGGGTATCTCGAGAAACACTGTGTC Gene GeneID:515580|GRPEL1:NM_001034501:35_cdna Constitutive 1 NULL GeneID:515580 6 GENE GRPEL1 MGC128286 GrpE-like 1, mitochondrial (E. coli) EMBV3_23736 GACAAGGTAGCTTCTTCTACATGACCTGTCCAGCTGCTTCTTCCTTAGACCTAAAATCCC Gene GeneID:533125|RASGRP1:NM_001144078:172_cdna Constitutive 0 NULL GeneID:533125 10 GENE RASGRP1 NULL RAS guanyl releasing protein 1 (calcium and DAG-regulated) EMBV3_30479 TCTGATCACACGCGCAGCTCAAGAAATCAGTTTGGCAGATCTGACTCTCAGTCTGAAAGC Gene BVT0101_010336 + 0 NULL GK000006.2:37457494-37478605 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202991 TCONS_00202979 TCONS_00202982 TCONS_00202989 TCONS_00202977 TCONS_00202974 TCONS_00202987 TCONS_00202992 TCONS_00202993 1 XLOC_124074 Coding TCONS_00202987 XLOC_124074 Coding Coding FAM13A 6:37125802-37459116 j TSS152161 7573 1 TCONS_00202987_6 1000 24 0.977351618448725 0.000756682836918945 4.16200208609345e-07 0.000519933285203009 2.42040855014211e-21 2.67192105816508e-08 0.000228549046257591 0.000282125535444829 0.000244979331488924 0.000472576992028767 1.81926328947719e-21 4.79466739805667e-09 1.81150176340508e-19 8.22216715156098e-09 1.8525966945182e-05 6.61682898915913e-31 3.39412618537393e-05 2.10687237288856e-43 9.47637592990519e-20 0.00148315125190063 5.87239882694807e-07 0.000169973191363449 3.42948368525734e-13 2.52374293878004e-08 2.58563067256929e-05 6.6883387276408e-08 0.00100517733192604 0.000114188526753734 4.11676155838307e-09 2.12985427251883e-10 8.32041810302454e-10 XM_005207750.1 FAM13A PREDICTED: Bos taurus family with sequence similarity 13, member A (FAM13A), transcript variant X4, mRNA. 0.0 1.349e+04 100.00 0.987191337646903 NM_014883.3 FAM13A Homo sapiens family with sequence similarity 13, member A (FAM13A), 0.0 4846 79.19 0.733394955763898 TCONS_00202987_6 sp|O94988|FA13A_HUMAN FA13A_HUMAN Protein FAM13A; 0.0 1706 85.56 0.999 1 coding 0 0 0 0 -0.853630959447973 0.117800693023621 -0.0923768636029327 0.0893260705015814 AAGATTCCTTAGACCCTATGGATGAGAATCGCCTGGTGTGTGACTTATAGATTCTGGCGCCCACTTCCAGGATGAAGCTCAGGAATCCTTATTTTCGCAAAGTAAAACAGCGGTTCGGCTGAAAGAAGACATGAAAAAGATAGTGGCGGTGCCACTACACGAGCAGAGGAATCCCACCTATACCAAGTTGTTTGGAGTCAGTCTCCAGGACCTTCACCAGCAGGGGCTGACCGAGAACGGTGTTCCAGCTATCGTGGGGAGCATAGTGGAGTACTTGACCATGCACGGACTCACCCAGGAAGGCCTTTTCCGGGTGAATGGCAACGTCAAGGTGGTAGAACAGCTTCGATGGAAGTTTGAGAGCGGGGTGCCCGTGGAGCTAGGGCGAGATGGGGACGTGTGTGCGGCGGCCAGCCTGTTAAAGCTCTTCCTGAGGGAGCTGCCCGAGAGTGTGATCACCTCCACGCTACAGCCTCGCTTCCTTCAGCTCTTTCAGGATGACAGAAATGATGCTCAAGAGAGTAACTTAAGAGCCTTAATAGAAGAGCTGCCAGATACCCACTACTGCCTCCTCAAGTACCTTTGCCAGTTCTTGACGAAAGTAGCCAAGCACCATGTGCAGAACCGCATGAATGTTCACAATCTTGCCACTGTATTTGGGCCAAATTGCTTTCATGTGCCACCTGGGCTTGAAGGTGTGAAAGAACAAGATCTCTGCAACAAGATAATGGCTAAAATACTAGAAAATTATAATACCCTGTTTGAAGTAGAGTATATGGAAAATGATAACCAGAGGTGTGAAAACCTGGCAAGGCTTATCATAGTAAAAGAGGCCAATTGTAAGAACATCCTTCTAACAAAAGATTTTGAAAGAGACACACTAAAGCCATCTCCAAAAACCAAGATCCGCAAATCCAGTAGTGAGGGATCTATTTGGACCCACAGGGTACCACACCCAGAGCTGTCTGAGGGCGTTCCTCAGGTCAGCCTGCAGCTAAGTCGGAGAAAATCCTGCTGGGATGACACGAGTTCAGCAGAGGATGCTAATGCTACCAAGTTGCTGTCCAGTTCGCAGGAAGATGAAAGACCTATGTCACCTTTCTATTTGAGCAGTGCCCACGTATCCCAAGTCAGCAGTGTGTCATCAACTGGAGAGCTCTTAGAAAGAACCATCCGGTCAGCTGTAGAACAACATCTTTTTGATGTTAATAGCTCTGGAGGCCAAAGTTCAGAGGACTCAGAATCTGGGGCATCATCATCTTCCTCCACATCCACCAAACAGCGACGACGCCAGGCTAAGGAGCAGGATGAAAGTCGACACAGCAGAGATGTGGGACGTCTCAACAAAGAAAATATTCCTTCTGGCTTCAGCAATCTTGATGAATGTATGTTGAATGCTTGTGAAGTGGAAAAATTATATGAAAATACTTCTGGTTATATTGGAGAAAGGGGTAAACCTAAACGTCAGAAATCCAGTTCCAGACTTTCTGAGCTCAATGAAAATCAAGATGGTCTTGTGAACATGGAAAATCTCAATCCCACACCATCTCATGAGAGGACTGGATCTGATCATGTTGAACTGATATCTGATGGAAGCAAAGAAAATGAAAAGGATGGCAGACAGAGCCAGCATCTTGAGAACCCCACAATGAAGATCCAGGAGCATCCCAGCCTGCCTGACAGCAAGCTGCAGAGGACTCCGGATGCTGATGACCAGCAGGAGAGCTTTGTGTCCGAAGTGCCTGAGCTGGACCTGACTGCACTGTGTGACCAGAAGAGCTGGGAAGAGCCTATCCCTGCCTTCTCCTCGTGGCAACAGGAGAGTGTGGACGCTGACGAAGCGCGCCTCTCCCCGCAGGCCGGGCGCCTGATTCGGCAGCTCCTGGAAGAGGACAGCGACCCCATGCTGTCCCCCCGCTTCTACGCTTACGGGCAGAGCCGGCAGTACCTGGACGACACGGAAATGCCTCCTTCTCCCCCCAATTCCCACCCTTTCATGAGGCGCCGCAGCTCCTCTCTGGGCTCCTACGAAGATGAGCAAGAGGACCTGACTCCTGCCCAGCTCACTCGAAGGATTCAGAGCCTTAAGAAGAAGATCCGGAAGTTTGAAGACAGATTTGAAGAAGAGCGGAAGTACAGACCTTCCCACAGCGACAAAGCAGCCAATCCAGAGGTTCTGAAATGGACAAACGACCTTGCCAAATTCCGGAAACAACTTAAAGAGTCCAAACTGAAGATATCAGAGGAGGACCTACCCCCCAGAATGCGGCAGCGAAGCAACACACTCCCCAAGAGTTTCGGCTCCCAACTTGAAAAAGAAGATGAGAAAAAGCAAGAGCTGGTGGATAAAGCCATAAAGCCTAGCGTGGAGGCCACTCTGGAATCCATCCAGAGGAAGCTCCAGGAGAAGCGGGCAGAGACCAGCCGTCCGGAAGACATTAAGGATATGACCAAAGACCAGATTGCTAATGAGAAAGTGGCCCTACAGAAAGCTCTGTTATATTATGAAAGCATTCATGGACGGCCGGTGAGCAAGAATGAGCGTCAGGTTATGAAGCCGCTGTATGACAGGTACCGCCTGGTCAAACAGATCCTATCCCGAGCCAGCACCATCCCCATCATTGGTTCCCCCTCCAGCAAGCGGAGAAGCCCTTTGCTGCAGCCAATTATCGAGGGCGAAACTGCTTCCTTCTTCAAGGAGATAAAGGAAGAAGAGGAGGGTTCAGAAGACGATAACTACACGAAGCCAGACTTCATGGTCACCCTGAAAACTGATTTCAGCGCGCGTTGCTTTCTGGACCAATTTGAAGATGACGCTGATGGTTTTATTTCCCCAATGGATGATAAAATACCGTCAAAATGCAGCCAGGACACCGGACTTTCAAATCTCCATGCTGCTTCCATACCAGAACTCTTGGAACACCTTCAGGAAATGAGAGAAGAAAAGAAAAGGATTCGAAAGAAACTTCGTGATTTTGAAGACAATTTTTTCAGACAGAATGGAAGAAATGTCCAGAAGGAAGACCGCACTCCAATGGCTGAAGAATACAACGAGTATAAGCACATTAAGGCAAAACTGAGGCTCTTGGAGGTGCTCATCAGCAAGAGAGACACTGATTCCAAGTCCATGTGAGGAGTCAGCCCCATCCGAGCAAGGGGGTGGGGGGAATGCAGGGGGAATGTCCTCCCTCCCTCCCCTCCCCCCCACCTCTCCTGGTAAGTAGCAGCTGGGCAGAAACTGGAAGGCAGCCTTGGAGCTGGACCTGCGCCCTCCTGCCTGCAGGCCCTGGGGGTCAGCCCGTTTCCATTGCCTGCCTTGGAAACCATCTAGGTGGAAGGAGGCCACCTACCCCCATGCCAAAATTTTGCAAGGGAATATCAAGATCTCTGCATACCTGTGTGCACACAGACACACACATACGCTGCAGTGGAAGCTTGCTGACACTGGCAGCGGTGAATCACTACATGAAGACACACTCGTCTACAGAGGATGTACACTGTTCTTCTGGGATAACTGAGCAACAGCATCCTCTGTCTAACTGTGACAATAACAAGCTCAGGACTTCACTCTGGAGAGCGAACTTGCTGCGCACATTCGTGTTCTCTGTGGATCCCATCCAGTGGGAGCCTGCATCGGAGCCCTGTTTGCTGCCTCGGCCATTCTTGTGACCTTTCCACGGAGCCACGCCTTTCCCCACTTGTGTGAATTGCTTCTCCTTCAACTCTCGGGTAGATGGAAGCTGCACCTGCCTGGGAGAGCAGTGCAGCCCTCTATCTGATGTTGTGTTTCTTCGAGATGTCCTCAGATGACAGAGAACTGATCCCTGACTAGGGCTGGACCATCAGCAGAGGACAGATGGGATAGAGAAGTAGCTAATATCCGTGCTGGTGTTTCAGTTAGGCAGCAGTGAAGAGAATTTTTTCCTGAAGGTTGACTACACTTATCAGCTTCAGAATTTATGATCGAACACTTAAGCAAGGGGAAGGCCACTGGTCTATTTGGTTTGGTTTTGGCTCTAGCTAGACAAAAGGGTCTTGCTTAATTCCTAGGTTAAGTGTAGAGGATCATGAGAGAGAAAGAGCCTGTATTTTAAGCCTTCTGTGTACTTACCAGAGTTTAATTTTTTTTTTTAAGTAAACCTGCACTAAAAGTCTTCTCTAACTGAAGGATAAGTGTAGCCCTCAGAGCACAGCTCAAGGCAGAACCTAAATCACACTGTTTTGAAGATCCTGTATAAAGAGAAAATAATGGTGTGTGGCCAGTTACAATGATAGTTTCTTCAAAGATGGTGTTGCAGAGCTATCTGTATTAGACATTTTGGAGGGACCAGGGAATTTAAGACAGCAAATCATCCATCACCTCAGTGTGCTGATGTTATCTGGTGATTGGTTAGTACTTTTTGACCTTCTGTGTCTGCACTAAAGAAAATGAGTTCTGGTTCTGCCTGTATACCCTAGCCCACCTCTGTGCTCTGGGAGGCTGAGCACAGTATCTGCCCACCAGCCACTGGTTGCCAAGAGAAGGTGTTTCTGCAGCTCTGCCTTTTGAAGATAATAGTGCAGGGTGAACAAGACAGCAAAGGGTACCATTCTGTTTTCTTTAATAATAATAACGGAGAAAAGTCTTCCTGATCAGTTTGTCACTTTCCAAAGTGGGTTCTTGAGAAACTGGTCAGATCAGGTTTGTAGCAGCATTTTCCATTTTGAGGTAGTGGCTCTCTGTTGGTTAAAAATTGTTCAAGTTAGGAGTAGGGGGAAATAGCTTTAAGTTTGCTCTTTCATCTTCTAGAAGCACGAGCTGTTTGTTGAAAGCACCCTGGTTTAATCCACACACTTAAAGACGGTACGTAATCCTACAGTGTAGTTCGTTTGGTATTCTCTGCTCTACTGTTTACACTGCAGATTGCTGTAGTTTCAAGGAGTTATATTATAAATGAAATGACGCACTTTAGGATGTTTTCTATTTTTGAAATCTGAACATGAATCATTCACATGACCAAAAATTGTATTTTTTAAAGAAATACATGTCTAGTTTGTCCTTTTTAAGTAATTACTCTCTCAAATAAGCTATAATATAAATCACATCATTACCAGTTAACTTTCAAAGCACATCTGTCTAAGTATTGTTTTGAAAATACTAATATGCTACAACACTTTCAAAGAGAGAAGGCTATATAAATGAGAAGTTACGAAATGTTTTGCAATCTGTTGTTTCTGCCAAAGGTAAATAAGTAAAAGATTTAGTCAGGAATCCCCTTTGAAATTTGTATGATTGAATAAAAGTATACACCAAGTTATAGTAAAATAAATCGCGTATGCAATGTCGTCTTTTCCTTTGTAGTTTATAATACGCTTCCTAGAACGGTGCCCAAATTACGGGAGGGGAGTCCTGTTTTCACTAGATTCTAGCTGAAGACACGTTAGTCAGTAGGTTCTGGCTCTGCCAGAAGTGCTGGGGCAAATTTGTTTCCACAGCAACCATTTCTGCAGCCTAGAGTCTCAAGGCCCTAGAGGCAGTGTCTTAATTGGCTTCATACAGAGTACACTGGACCACAGTTTTTCCTTTGCTCTCTCGGGAATGCATATGTGTATTTACTAACACATGCCAACAAAATAAATGTCAAGGGTTATTTAATAACAAGGATAAGTAAAAATAAAGCATGAATAAACTTAATAGTACGATTATAAGAATTAGAGATAGCAGAGACTTATAATTTTCCAAGCATTTGCTTTTATTGTTTTAGTCTCGCGTAAACCTTGAAACAGATGTTTATATGGGCTATGGTATCATCACTGCATTTCGTCTTTGAAGCATTGAGGTTGATCTTACTTTTTGACAGGTATGTGCAAGGTTTAGGATAATGGCCTGCTGTGAAGTGTTTCACAACAGGCAGAATTTGTTTCATGCCAGTACAAGAAAGTCTGCACCAGCTCACTAATCTCTGATTCAGGTCAAATTTCTCGGAAAGACCAAATCACATTTCAAACTGGAGAATTTTTTTTTTTTTAACTTGTTAGCTGTAATTCATTGTGAGCTAATAATTAGATTTCTTTGCTTTGGTTGCCCGTTTGAAGTCCAATGATTATTATTCAGTGGCAAGGCAGGGATGAGCAGTGCCTCTGTTTGTAATATCAGTGTGATTTGTGTTTTGTCTCATCCTGACGCAACACTTACGTGTGGCAGAAGAGTCTGAGGCAGGGTGTGCCTGCTCCCAGGTGTGGCATTTCTAGCCCAGGACAAATGCTTCAGGGCTGTGCTTGTATCATAAACATGGACTGTGGCCAGCCATCTTGGAGCCCTGAGGGCTGGGCATCTATTAATGTGGTTGAGCTTAGAATTCCTCTTAAAGTGACTATTAAGGTCTATTATCAGAATTGAAGGGCAGCTGTAGTGCCAATTAAGTTTATTCTTTCAGGAGCTGCCTAGTTCTCAGTAGGCATAATTGGACCCTCTTTCCTGAACTGATCATAGGTTTACAAGAAAGATCAAAATTTAAAGTTCGTTGATTAATTTTTTAAGAGCTCTTAACCTGATTATGAAGATACCATCTCTCCTAAGGGTATATTTTTTAAGCATTTATACTTTATTATCTTTGGTGGTATATTTATAGCTGAATGCCATAAATGCTTAACTGCTTTGTGAAAATCTGATTGTAGTCTAAATTGGCTTTGATCTCAAGACAAGTATTCCTGAATATTGCTTCCCGAGGATTTTTCTTTTGAGAAGAGAGGTGGTTTCTGCACCAAGACCAACACCTCTGTGATATTCTTTCATAATATCCATTTGGTTAAACCAATAGGTTGGGACAAAACTAGACTAAAACGCTGAAGTAGTTTCCTCAGAAACCCATGGGTTTAGCAGAAACCAGAATGTGCTTTCTTTTCCTTTGATTAATTCCCTTCCTTTATATTTTTTTCCCCACATGATCCTCAAATTCTACTGAAGAGTACCTTTTGTCAAAACATAGGCTAAACATATTTTCAAATCTGTAGGTACTGAACTTGTGCATCCTGGCACTTCTTCACAGGGTGGCTGACTCGGCAAGCCCCAAAGATGGGTGTTCTACATGTCAGCCACTGCACTGGGGCATTAGTGACTTTCCTGAGTAGAGGTCACTGCCCTTGGGGGCATATATGCTCCTCCCCCATGATCCTTCATAACAGAAGTATGTGGATACGCCGGGGTCAATTAACAGGTCCACACAGATATGTATCAAAATGAAATGTGTACATCTACAACTTCATATTGCTATGAAACTGCGCTTATGTCTCTAGAGGATCTCATTTGGCCTGGAATCCAGCCAATCTGATCACATGCGCAGCTCAAGAAATCAGTTTGGCAGATCTGACTCTCAGTCTGAAAGCATCTATATGATCATGAAAATCTCCACGAGTGGATACAATTTTAGTAAATAACATGGGCCCAGAACAATGTTTACATGACATGTAAGCAGAAAGTCTTTGAAATTACCGTTGTTCCTTTTTTAAAATGTAAACTGAATGAAAAGATGTTATGTACATTTTTAAAGTACATGACTGTATTTTGTATAAACATAAATAAAATATTTTTAAT EMBV3_27025 GTGCAGCTCCGCCCCCCTCTTGCCAGCTTCCGGAGTACAACTTCCACTCGGAAGAACACT Gene GeneID:514597|CLCN1:NM_001143871:655_cdna Constitutive 0 NULL GeneID:514597 4 GENE CLCN1 NULL chloride channel 1, skeletal muscle EMBV3_21534 GGTTGGATTGGACCGGCAGGCGAAGCTGAGCACAGTCTGGTCTGTCGTGAAGACTGTCTT Variant GeneID:532560|SLC25A15:NM_001046326:139_cdna 409^546 1 EMBV3_12526 GeneID:532560 12 GENE SLC25A15 MGC137403 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 EMBV3_08975 CAGTTAGGCTGCTGTTGTTGGAGAGGCAGCCACCTTGAGCCAAAACGAAAAAGCCAGAGA Gene BVT0102_011748 + 0 NULL GK000027.2:40157825-40235688 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155695 1 XLOC_094792 NonCoding TCONS_00155695 XLOC_094792 NonCoding NonCoding - 27:40205481-40207070 - TSS116437 1025 2 TCONS_00155695_1 36 0.171707317073171 2 0.355793450881612 0.00382223889132453 0.00212458490998323 0.00482184161855564 0.00272262627472388 0.00225515179637426 0.000922175406793905 0.00154265240417423 0.00170728201629634 0.00663338818495639 0.000446448122007809 1.21989203884526e-05 1.09528035795484e-10 0.000158530280808382 0.000157444806025546 0.00085873491023728 0 0 0 0.00168477640285781 0.00342480724562499 0.000913430534412846 0 0 0 0.00208320691357286 0.00166412755227953 0.000777661225818038 1.02192196665341e-09 6.02051428801464e-10 6.33924268765611e-10 XR_232613.1 LOC100295410 PREDICTED: Bos taurus retinoic acid receptor gamma-A-like (LOC100295410), transcript variant X2, misc_RNA. 3e-52 210 100.00 0.11219512195122 XR_111243.1 LOC100129223 PREDICTED: Homo sapiens uncharacterized LOC100129223 (LOC100129223), misc_RNA. 1e-06 59.0 79.71 0.0663414634146341 0 noncoding 0 0 0 0 -0.139011394019151 0.352731138423097 0.0285729704070175 0.539077262716211 ACTTATAACCAAAGACTGCATCAGAAGACTTTTTCTGAATAGTTGTACAGATGAAAATGTTCTATTTGGAAGCAATCAATAGTGAATGCTGTGGACTTCTAAGGCTGTGGTGATTTCACCCGCAGTGCTATGAACTTTCCCATATTTGTACAACGGATGCTCATGTGCTTAATTGTTTAATTCCCTGAGTGGCTGTAACATGCCAAGCGTATGTTATATGCTACGGACGGTACATGGTGTAATCCCTTAAGTTTGGCCCAATGAAGAGTAAACTAACAATTAAAAATATAATACAGTGGTTCTCAAACTTGGCTGTATATTAGAACTACCTGGGGAGCTTTAAAACTTCCTAATGCTTAGGCTGTATCTATGACTGATTACGCCAGAATGCCTGGGAGTGGGAGCCAGGCATCAGCGCTTTTTAAAAAATATTCCCAGGTGAATCCAAATTGCAGCAGTTTGGGAACCACGGATAAATAACATATCAGAGAGGGCTATATAAGCCTTATTCAGCTCAGAAAAATCATGGGAGTCTTCCAGAGGAGGTGACCAGGCTGTTTGGAAGAAAGAATTGATTTTGTTGTGGTTTGCAATGTGAATCCTACACGTGCCATGCGTGCACCCCACACAAACATAAATAGAAAAGACTTTTATGAAGCAAGAAACAGTGATCTTTGGAAAAAGTTTCCCATCGGTGGTAAAGAATTAATTGACTGTATATAGTCGAACATCCCCTCAAACTGGATAAACGCTGGTCTCTCACTTCTTCCGTGGGAATCTCAGTGGTGCCGTGAGACTGCCAAAGCTGGCTTTAAGCAAACAAGCCATCACGAGCTCCAGAATTACAACGAGGATATGGCATCAATATAAAAGCAGATCTGAACTTCAAGGCACTCTCTGGCTTTTTCGTTTTGGCTCAAGGTGGCTGCCTCTCCAACAACAGCAGCCTAACTGCGCGCCAGACCAGCCGTCAGGAAACCGCCAAGCAGGAAGCTTTGTGCTCTGGCGAGGTGGATGTTGGGCTN TCONS_00156514 TCONS_00156515 r 5' 112 TCONS_00156514 TCONS_00156515 r 5' 112 EMBV3_42947 GAAGTTCCCAGGAGTAGAGGAGGTGACTGTTAGTGTGTCTCTGGTCATTTCCCTCATCCT Gene GeneID:450206|AQP8:XM_002698001:100_cdna Constitutive 0 NULL GeneID:450206 25 GENE AQP8 NULL aquaporin 8 EMBV3_15835 CAGCCTACTGAGCTACAGTACATAGGGTTGCAAGGAGTTGGACACAACTGAGCAGGCACA Gene BVV0101_068476 + 1 EMBV3_02349 GK000005.2:29898283-29905580 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07335 GCTCTTACATTTTCAGAGTTAAGTAACCATACCCTATCTTATAAAGGGCTTCTCATAGTG Gene BVV0102_452057 + 0 NULL GK000008.2:102141485-102214970 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17365 GTCCTGCTGAGGGGGCCTTTCCATGGGGACCGTGTGCAGTACAAGTTTGGTGTTTGGAAC Gene BVT0102_065593 + 0 NULL GK000003.2:24902369-25111157 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31998 CACGTGAAAGGAATTGTCAGGGCTATGTTGCATGTTTAGTCAGGGAGGCAGAAACATCTA Gene GeneID:508782|C22H3ORF64:NM_001077882:20_cdna UTR3_Alt 2 NULL GeneID:508782 22 GENE C22H3ORF64 MGC143280 chromosome 3 open reading frame 64 ortholog EMBV3_42535 TCGTGAGCTGTCGTGGCTGTTAGGGTGGAAAGTGTTTGCTGTACAATGTATTTTCACTGC Gene GeneID:508454|GJB6:NM_001015546:25_cdna Constitutive 0 NULL GeneID:508454 12 GENE GJB6 NULL gap junction protein, beta 6, 30kDa EMBV3_38682 TTGGCTTATCTAATTGTCTCCCTTTTCTAGAAACTAAGCAGCTTGAGAAGGGGCTGAGCC Gene BVT0102_263877 + 1 EMBV3_43363 GK000020.2:14459921-14682225 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23738 GGTCTTCCCAGACTCCTTTGCCTCTGTCGCCAAGTTTGCCAACTGGATCAACTCTATCAT Gene GeneID:100126050|ELANE:NM_001105653:258_cdna Constitutive 0 NULL GeneID:100126050 7 GENE ELANE ELA2 MGC157260 elastase, neutrophil expressed EMBV3_22816 CCTTGGTACTCTGGAACCTACAATATGGCAGTATAGACCCCAAGGCGACAAGAGGGGAAC Gene GeneID:530688|RPP25:XM_002696632:173_cdna Constitutive 0 NULL GeneID:530688 21 GENE RPP25 NULL ribonuclease P/MRP 25kDa subunit EMBV3_01559 CGGTCCTGGTGAACTATCTTTGCTTTAAAGGTGGGTTGATTTATTTGTTCCAAAGTTTTC Variant GeneID:282518|SERPINA7:NM_174668:2_cdna 661^934 1 EMBV3_08421 GeneID:282518 X GENE SERPINA7 NULL serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 EMBV3_19675 GAATGCTACAAGGACCTTCAGAAGCTCATGTTGTAATATGCATTTGTTCTTCCTTTACCC Gene BVT0102_299670 + 0 NULL GK000006.2:23229531-23289377 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07337 TTTTAGTTAAAATATGGTTACCTATGACGATAACCTACGATTATTAATCTTTTTCTAAAA Gene GeneID:504408|RPS6KA5:XM_002691117:47_cdna Constitutive 2 NULL GeneID:504408 10 GENE RPS6KA5 MSK1 ribosomal protein S6 kinase, 90kDa, polypeptide 5 EMBV3_41028 TCATTACCGTGAAGATTTCTGGGCGCTTTGCCATCACCTTGATCTACAAATGGCACCCCC Gene GeneID:100336892|LOC100336892:XM_002687219:105_cdna Constitutive 0 NULL GeneID:100336892 5 GENE LOC100336892 NULL hypothetical protein LOC100336892 EMBV3_34023 ACTGAGCCAGAGTTGGGCATAGTCTGAGGCATAAGGACCAGAGAGTTGAGTGAGAACAAC Gene GeneID:534594|TGDS:NM_001101159:35_cdna Constitutive 0 NULL GeneID:534594 12 GENE TGDS NULL TDP-glucose 4,6-dehydratase EMBV3_07310 TTCTGAAGAAGAATGGTGGCATTGTGATGGTGTCGCTGTCCATGGGGGTGCTGCAGTGTA Gene GeneID:618258|DPEP3:XM_002694904:975_cdna Constitutive 0 NULL GeneID:618258 18 GENE DPEP3 NULL dipeptidase 3 EMBV3_05078 AGAAGTGAACCTCGCTGTCCAAGGGCAGTTCTAGCTTTCACGAGTTTTCTTTTGCCCAAA Gene GeneID:784270|LOC784270:XM_002686939:60_cdna Constitutive 0 NULL GeneID:784270 4 GENE LOC784270 NULL similar to hCG2038584 EMBV3_41242 AGTCCTCCCTGACAGCAGACGATGAGGATGTGCGCCAAACTGCCTTTTATAGAATGTTCC Gene GeneID:281097|CSH2:NM_001164321:17_cdna Constitutive 1 NULL GeneID:281097 23 GENE CSH2 CSH1 PL chorionic somatomammotropin hormone 2 EMBV3_19371 ATGGGTCCATCCACTGACCTGTCTACAGTATTCTAAGTCCCCGAAGATTACAGTCCCCGA Gene GeneID:768011|MGC134093:NM_001077070:2_cdna Constitutive 0 NULL GeneID:768011 6 GENE MGC134093 NULL hypothetical protein MGC134093 EMBV3_23742 GAAAGCCGGTTCAGAAATTGCCACCATGCCAGATCCCCAACAAAGAGGGGGTTCAGCTTT Gene GeneID:514832|PEX5:NM_001046183:43_cdna Constitutive 1 NULL GeneID:514832 5 GENE PEX5 MGC138089 peroxisomal biogenesis factor 5 EMBV3_33691 CTGCCACTCAGCGTCGAATGGGTTGACAGAAACGTGCGCCTATCTCGTTATCTTCAGAAT Gene BVV0102_441768 + 1 EMBV3_21737 GK000005.2:60300501-60372423 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199647 1 XLOC_121300 NonCoding TCONS_00199647 XLOC_121300 NonCoding NonCoding - 5:60307058-60307762 - TSS149215 704 1 TCONS_00199647_2 139 1 0 1.93262720054111e-05 0 0 0.000106161018999406 0 0 0 0.000672127329795491 0 0 0 0 1.22270742105563e-05 0 0 0 0 0 0.000285207714644182 2.04302120915694e-05 0 0 0 0 0.000186990245830542 6.00466271101564e-05 0 0 0 0 0 noncoding 0 0 0 0 -0.135843248420412 0.454581191032757 -0.00618465446071591 0.927861680702551 GGCGACCATGGACCTGTGGCTTGGCGGCCTGAGGGAAGAACCCGGCGCCCGGGCTCCACCTGGGAACCCGGGGGATGGATGTTCCTCTGCGCCGCCTGTGGCTCAGCGGGGACGGCAGAAGCTCCTCCTGGGCGGGTTTCGCACTTGTCGTAGCTTTCGGGGCCTGGGAGGGGGCATCCAGTGTTAACTCCAAGCAACTGAGATGCAAAATATTCCCCGGACGTCCTTACCCCTTCATAGAATTTCTGCCACTCAGCGTCGAATGGGTTGACAGAAACGTGCGCCTATCTCGTTATCTTCAGAATCTGCCCGTATTGACTGGCGTAGAAAGTTTTCCAGAAAACATTTCCTTTCTGAGGAGGCAGCCAGGTGTGAGCTCAGGTGGCAGTGAGTGCTTTGAATTTGGCTTCCTCAGACAGCAAATAAGTTTCCAGAATGGGAAACAAGATGTAAGGGAAACGAAAGTCGCTTCTGTTCAAAATTACTTTACCTGAAACTGCCAATTTAAGGTAATGAAGTAGTTTCCGGAAAGAAACGGAAGGAAGAGACTCGGGGAGAAAAATCTAGAGAAAAGTCAAGCCTACAGGTACGGAAAGATTAATCCACTAGTATTTATTGAGCTTTTATTTATACTTTGCGTTCGACTCTGAGCCATTTGTGCTCTGTTTCCCCGTGGGGAAGATGGAAAATGAAAAGAACCAGCG TCONS_00192157 . 3' 6559 TCONS_00192157 . 3' 7262 EMBV3_06492 TGGTATCAATGCAGAAGAACAGTTTTTAGAAAGCCATAATTGAGCCACACACTCATGTGC Gene BVT0102_086199 + 1 EMBV3_20663 GK000024.2:47102844-47150588 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42181 CGACCTGGTAGGGGATCTGCGGGGACAGGTCCTCAGTTACATGGATCTACAAAATCTCAA Gene GeneID:533952|FAM149B1:NM_001077994:365_cdna Constitutive 0 NULL GeneID:533952 28 GENE FAM149B1 MGC152225 Protein FAM149B1 EMBV3_20293 CTGGTCCAGATCTAGGGCCTCCAGCCTCCAGAACCTTGGGCAATAAAACTTTGTTGTTCA Gene BVT0102_015553 - 1 EMBV3_38776 GK000024.2:43209176-43217468 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142787 1 XLOC_087212 NonCoding TCONS_00142787 XLOC_087212 NonCoding NonCoding - 24:43216162-43216983 - TSS106998 821 2 TCONS_00142787_1 55 0.559074299634592 1 0 0.000430874959238152 0.000122392697266903 0.000135259360179459 0.000434931722759634 0 5.66403782455907e-05 3.55159430219309e-05 0 0 0 0 4.35529768191326e-06 0 0 0 0 0 0 8.73438179249147e-06 0.000105112370888952 0 0 0 0 0.000135025231519258 0.000351845329339741 0.000299737486078572 0 0 0 XM_002697805.2 LOC100336584 PREDICTED: Bos taurus cell death-inducing DFFA-like effector a-like (LOC100336584), transcript variant X1, mRNA. 2e-148 529 100.00 0.355663824604141 NR_001544.2 NCRNA00185 Homo sapiens non-protein coding RNA 185 (NCRNA00185), non-coding 2e-08 64.4 70.62 0.186358099878197 0 noncoding CAGATAAAAAACAAGCAATTATGTCAAAATATTAAAGGCTGGCTGAATCCAGGCACTGCGTATAAAGATGCTCATGGCATGTTCTCTCTATACATCTTTATATTTGAAATTTTTTGCAATAAAATGTTTTTTTAGAGGTGAGTTGAATTGAACTGATTGGACCCACTGTCTCATTGTCAAGCTGGTGTCCAGTCCAGTGGGGCTGCTCCGACAGAGTGCTGGACACCAGTGGTTTATTATGAACAACAAAGTTTTATTGCCCAAGGTTCTGGAGGCTGGAAGCCCTAGATCTGGACCAGCAGGGCCCAGTTCTGGTGACACCACCTCCTGGTTCACGGCAGACAGTCCCTTCCCTGTGTCCTCAGAAGGCAGAAGGGGTGAGGGAGCTCTCTTAAAAGGACAGTAACTCCATCCATGGGGTAACTGGCCTCATAACCCCATCACCCACCCCCTACCCAGGCCCACCTTGTAAAGCTAGCACACTGGCCATTAGGAGGTCAGTACATGAGTTGTGAGGGGTATACAACATTCAGGCAACTGGCAGGGGGCGAGGTTCAGATGGGGCTCTGGGCCTGAACCCCCGTCGTCCGCCAAGGCTGGAACCCCGCAGGCCCCGGGGATGCCAGGACTCTGGAAGGAGATTGCTTTTGGCCCCACATTTCCCTCGGTGACACCATGAGCCTCGGGGCAGGACGGGGGAGGAAGAGGAGGAGTAGGAACTCGGGCAGCAGGGCCAGCTGTGCAGGTCACGTGAGTCCGGGGACGGAGGCAGAGGTCAGGCGGCAGATGTCAGGCGACAGCGCTCTGGGAGCCGGCTCCGC TCONS_00139071 . 5' 486 TCONS_00139071 . 5' 486 EMBV3_12446 CCCACCAACAGTATACAGGGGTTTCCTTTTCATCACAGCCTCGCCCACATTTATTTGTTG Gene GeneID:513253|EDEM2:NM_001101085:1021_cdna UTR3_Alt 2 NULL GeneID:513253 13 GENE EDEM2 NULL ER degradation enhancer, mannosidase alpha-like 2 EMBV3_22219 ACCGCCATGTGGGTTCCTTTCTGTGCACTATGAACGCTTCTTTCCCAGGACAGTTACAAA Gene GeneID:282382|TGFBR1:NM_174621:51_cdna Constitutive 0 NULL GeneID:282382 8 GENE TGFBR1 NULL transforming growth factor, beta receptor 1 EMBV3_16012 CCGCTGACCGCAAGCTCTCCAAGATCGAGACCCAGCCCAAACAGATCTGCACCTTCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06442 GATCAGAGAGGAACTCAAGTAAATAGAAAACAGGAAAACAATGAGATGAAAATCCCATTC Gene BVV0102_090821 + 0 NULL GK000001.2:88549160-88632286 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09050 CCACTTGCCCAGGCCTAGAGACTGCAATCAAAACAGAGAAAAGGCAAAGAAAGTCTGGCC Gene BVT0102_009439 + 0 NULL GK000007.2:49617249-49961307 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213385 TCONS_00213381 TCONS_00213382 TCONS_00213380 TCONS_00213383 TCONS_00213384 1 XLOC_130439 NonCoding TCONS_00213384 XLOC_130439 NonCoding NonCoding - 7:49820977-49864290 - TSS159860 386 1 TCONS_00213384_1 45 3 0.99115718507573 0.00635627778885234 0.000453018035753902 0.00246503095218395 0.000113154938456128 7.45377050566635e-17 1.93730493104613e-05 2.30954908264392e-05 0 5.21852896313706e-05 8.69611520749695e-20 5.93049463254285e-06 0 1.24077521744462e-37 0 0 0 0 0 2.15201195217101e-50 0.00248582296585006 0.00160877377302867 0 0 0 0.000108985802331891 0.000626687910807004 0.000390252604533106 0 0 0 XR_231710.1 LOC101909007 PREDICTED: Bos taurus uncharacterized LOC101909007 (LOC101909007), 2e-74 282 100.00 0.401554404145078 0 noncoding GCCTGGGCCGGCTCCAGCCCCGTTGTCAGGACCAATAATCCTGATCCCTGACAGGACCACCCCTCCAGAACTCCGCCCACCAAAGGGAAGGCATGGCAGGAGAATCCACTTGCCCAGGCCTAGAGACTGCAATCAAAACAGAGAAAAAGCAAAGAAAGTCTGGCCATCCGGAGAACTGCCACTGCCATCCAAGAGGCTGGAGACCACAGAGGCTACAGACAGAATCTTAAAGGGGCTGGAAGCAACATTCAGCATGACCCTTTCTCTGGTCCAGGTGAGCCTTCCTTAACCCCGGCCCCGCAGCCCCTCTCGACACCTTCTCTGCCTGCCACGGACCTCACTGCTGCCCTCAGCGCCCTTTCTAGCTTCTTACCAGCTTTGTGATC TCONS_00216989 TCONS_00216990 r 3' 97018 TCONS_00216989 TCONS_00216990 r 3' 140330 EMBV3_30531 GCTTGCACACTCCTTTGGAACTGTAATAGCTTTGCAACAGAAATCCCATAGTTTCCTATA Gene GeneID:540966|RAD21:NM_001034717:47_cdna Constitutive 0 NULL GeneID:540966 14 GENE RAD21 MGC128995 RAD21 homolog (S. pombe) EMBV3_11363 CAGCCCAGTGGATTGTCATCATTCGTTGAGTGTGGGTGAAAATGTAGCTGGCTCTGAACT Gene BVT0101_037862 + 0 NULL GK000003.2:89699454-89742860 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17818 CAGGCTTCCTTGCTAACTAAGACTTCTTGGGGGTCTGGACGGTCAACATCTGCCTGAGAA Gene BVV0102_043907 + 0 NULL GK000021.2:31275980-31352397 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177648 TCONS_00249639 TCONS_00115686 TCONS_00252353 TCONS_00129783 TCONS_00224113 TCONS_00007677 TCONS_00197928 TCONS_00249539 TCONS_00252235 TCONS_00250720 TCONS_00116100 TCONS_00169197 TCONS_00124846 TCONS_00010366 TCONS_00071860 TCONS_00037672 TCONS_00020157 TCONS_00153678 TCONS_00222766 TCONS_00200932 TCONS_00207069 TCONS_00252810 TCONS_00209711 TCONS_00175855 TCONS_00009884 TCONS_00218945 TCONS_00252107 TCONS_00169198 TCONS_00148280 TCONS_00250930 TCONS_00166977 TCONS_00008224 TCONS_00021569 TCONS_00056146 TCONS_00249011 TCONS_00123620 TCONS_00176735 TCONS_00248864 TCONS_00224475 TCONS_00031939 TCONS_00107179 TCONS_00239419 TCONS_00039951 TCONS_00189891 TCONS_00131137 TCONS_00169199 TCONS_00189806 TCONS_00038458 TCONS_00041057 TCONS_00063181 TCONS_00185881 TCONS_00062744 TCONS_00234065 TCONS_00009259 TCONS_00111497 TCONS_00224484 TCONS_00048820 TCONS_00109027 TCONS_00209636 TCONS_00007431 TCONS_00222455 TCONS_00245928 TCONS_00124585 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00178325 TCONS_00161667 TCONS_00010054 TCONS_00240534 TCONS_00065823 TCONS_00209032 TCONS_00110323 TCONS_00251914 TCONS_00085967 TCONS_00130290 TCONS_00063486 TCONS_00063080 TCONS_00207365 TCONS_00207755 TCONS_00197601 TCONS_00250246 TCONS_00209558 TCONS_00040179 TCONS_00249772 TCONS_00224483 TCONS_00010471 TCONS_00088088 TCONS_00157613 TCONS_00021595 TCONS_00199424 TCONS_00200529 TCONS_00064619 TCONS_00080066 TCONS_00161835 TCONS_00135546 TCONS_00059708 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00250726 TCONS_00249569 TCONS_00116665 TCONS_00020023 TCONS_00223554 TCONS_00070810 TCONS_00251907 TCONS_00107832 TCONS_00199037 TCONS_00109858 TCONS_00110403 TCONS_00019199 TCONS_00218898 TCONS_00218552 TCONS_00122686 TCONS_00157036 TCONS_00031910 TCONS_00180345 TCONS_00152645 TCONS_00251929 119 XLOC_131641 XLOC_107421 XLOC_152582 XLOC_069855 XLOC_155294 XLOC_078496 XLOC_137409 XLOC_003238 XLOC_119588 XLOC_152482 XLOC_155176 XLOC_153663 XLOC_070269 XLOC_103305 XLOC_076389 XLOC_005917 XLOC_043630 XLOC_021501 XLOC_010835 XLOC_093441 XLOC_136073 XLOC_122582 XLOC_125588 XLOC_155751 XLOC_128222 XLOC_105634 XLOC_005437 XLOC_132264 XLOC_155048 XLOC_090162 XLOC_153873 XLOC_101813 XLOC_003782 XLOC_012242 XLOC_033949 XLOC_151954 XLOC_075172 XLOC_106509 XLOC_151807 XLOC_137538 XLOC_018184 XLOC_063090 XLOC_146085 XLOC_023768 XLOC_115928 XLOC_079842 XLOC_115843 XLOC_022282 XLOC_024868 XLOC_037908 XLOC_111934 XLOC_037471 XLOC_143544 XLOC_004815 XLOC_067397 XLOC_028951 XLOC_064932 XLOC_128147 XLOC_002992 XLOC_135764 XLOC_150855 XLOC_076129 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_108098 XLOC_098554 XLOC_005606 XLOC_147198 XLOC_040542 XLOC_127543 XLOC_066227 XLOC_154855 XLOC_052005 XLOC_079001 XLOC_038213 XLOC_037807 XLOC_125882 XLOC_126270 XLOC_119262 XLOC_153189 XLOC_128069 XLOC_023996 XLOC_152715 XLOC_006022 XLOC_052875 XLOC_096068 XLOC_012268 XLOC_121077 XLOC_122181 XLOC_039343 XLOC_048950 XLOC_098720 XLOC_081769 XLOC_036490 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_153669 XLOC_152512 XLOC_070831 XLOC_010701 XLOC_136854 XLOC_042587 XLOC_154848 XLOC_063742 XLOC_120690 XLOC_065762 XLOC_066307 XLOC_009879 XLOC_132217 XLOC_131872 XLOC_074241 XLOC_095496 XLOC_018155 XLOC_110113 XLOC_092410 XLOC_154870 Coding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_01431 AGCAAGCTCACCGCGAACCCCGTGGGCAAAGCTGGACAGAACAACAAGGCAGTGACCGGA Variant GeneID:525510|LOC525510:XM_002695046:374_cdna 352^487 2 EMBV3_20728 GeneID:525510 18 GENE LOC525510 NULL similar to F-box protein 27 EMBV3_39908 TTTTGAAAGGCCTTATACGACTCTTGGCATTTTCCTCACCCTGGCGTGTCGGGCTGTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35857 AAGATAATGGATTGAAAAGTCTGAGAAATACTTTCCTTATGCATACCTTTTGAATTAACT Gene GeneID:521189|SLC11A2:NM_001101103:80_cdna Constitutive 2 NULL GeneID:521189 5 GENE SLC11A2 NULL solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 EMBV3_39937 ACGAGTTGCAGCAGGAATTGAAGACCACACGCCATCTGCTGGGAGAACTTGGTATTGGCA Gene GeneID:511056|HAUS8:NM_001075487:56_cdna Constitutive 0 NULL GeneID:511056 7 GENE HAUS8 HICE1 MGC151496 NY-SAR-48 HAUS augmin-like complex, subunit 8 EMBV3_04583 ACCTCCTGGCCTTCCGAAGATATGTGGCCTGTGTGTACTTAGAGAGCAATGCAGACACAT Gene GeneID:540000|LOC540000:XM_002689111:59_cdna Constitutive 0 NULL GeneID:540000 7 GENE LOC540000 NULL hypothetical LOC540000 EMBV3_01799 TTCATTGCTTTCAGCTAACTGTCACCCCAGCCTCCCAAAGTGAAATGCTTGACCAGGATC Variant GeneID:617083|UBE2F:NM_001076443:23_cdna 307^374 1 EMBV3_10338 GeneID:617083 3 GENE UBE2F NULL ubiquitin-conjugating enzyme E2F (putative) EMBV3_22608 ACAGAAGAAGAAATCTCTGTCACCCACCTCAAACAAGAGGACGAACCCTCCCCGTTAGCC Gene GeneID:539676|DMTF1:XM_002686719:74_cdna UTR3_Alt 2 NULL GeneID:539676 4 GENE DMTF1 NULL cyclin D binding myb-like transcription factor 1 EMBV3_06324 ACGCGGTTGCAGTCTAAGAGCGCTGACGTGTTCTACTGCCAAGCTGAGGAATAAATGTCA Gene BVT0102_135320 + 1 EMBV3_35454 GK000022.2:36369903-36737623 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126754 TCONS_00126760 TCONS_00126750 TCONS_00126755 TCONS_00126753 TCONS_00126756 TCONS_00126757 TCONS_00126752 TCONS_00126758 TCONS_00126759 1 XLOC_077488 NonCoding TCONS_00126754 XLOC_077488 NonCoding NonCoding - 22:36566256-36645358 - TSS94972 1497 4 TCONS_00126754_2 49 4 0.981125396644796 7.51173126511714e-20 0.000171383344123019 0.000364413615787597 0.000684286077527589 0.000217959458973698 2.21309281338587e-08 4.18277309591402e-09 9.98023663333998e-05 1.92851478575384e-05 1.18931396521099e-64 4.82165455542936e-15 1.74550732170651e-15 3.51640326998725e-05 3.07477833213034e-32 0.000701610284322503 1.14160039282643e-28 0 7.85543509325145e-15 0.000429383944164738 0.000516338449037813 1.1768170347018e-40 0 1.49222143503934e-19 5.11707926774937e-09 1.95354812661077e-23 4.29535055351004e-27 8.92573439276805e-05 8.23729184797856e-16 7.33115896929293e-18 4.03014971578254e-20 XR_229415.1 LOC101906240 PREDICTED: Bos taurus uncharacterized LOC101906240 (LOC101906240), 1e-15 89.7 100.00 0.032064128256513 0 noncoding GGATTTCCCTTGCTCATTGCTTGTATCTTCAGTTTACAACAAATGTCCTGAAAATGGGACACATATGATATCAAAGCAGATGGAATTGTCATAATCACATCATCATCATCATCATCATCATCATCATCATCATCATCATCATACTGAACATCTACTCTACGCTAAGCACCATGTAAATTGCTTCAAATGTATGCATTCTCTCAGAAGGAAGAGGAAAAGAAAGAAGTTAGGATGGGGTTTGGGGCAGCGAATAGAAGGAGGAAGGGAACACTCTGTTTCTTGCCCACTGATGGCTCCAGTCCAGCTCTCAGATGAGACTGATGACCCCTCTGAGGACTGAGCACGCAGTCCCCGGGCACAGCCGTCAGGAGGGACGTCCACGCGGCTGCAGTCTAAGAGCGCTGACGTGTTCTACTGCCAAGCTGAGGAATAAATGTCACGAGAAAAGCCCTTGAAAATGATTCTCATCCTGCTTTTCCATCACAAACAGCCCAAAACGAACTGTTCTCAAATGTTGAACTGTAATATTAGTCGTGGTTGAGAAAGGCTTCTGGTAAGAGGGTTCTTGGGTAAATAAGTTGCTAGGATCTAATTGATTATCAATGAAATTCCCAGAGCAATCTCTTGTACAGGAAATAGGCTCATGTGACCTTTAAAAAAGAAGTATGCTACTTTATGATAAGGTGATTCAAGAGTGATTTTTTGTTGATTTATTTTGGAAAAGCCATTTATACAATGACTGAGATTAAAAAGAGAGAGAGAAGCCTCTGCTGGTCTCTGGTTTACCTTACTTAGAAGGGGAGAGATAAGGTAATTGTATCTTAGAAAAAAATTAACTGCTGTGTGTTGCTGGCTCTCTCAAGCCATTTTCACTTCTCTTATATTGATAGCTCTCACTGCTAACTCCTAAAGACTTTAACAATCCATAGATGGAGTTAATACCTTCAATGCCCCCTTCATGCATTCTCAGCATCAGGACCTAATAAGTAGTGATGTCTGGGTTGCTCTGTTCTGAAGATTGCCTGCCACTACCTTGGTGCACTGCCCTGGATTTGCAGTAATCTGAGGGGATTCAAGGCACAAAGATTCAGAGATTGGAATCATTTTGCCAGCTCTGGAAACCTCTGTCACTCTAAGTTCTTTAATTTTCCTATATTTTTTATTCCCCCCAATAACTGAAGCCTTTACTGGAAGGTCAAGTAACTTTGCTGTAAATTACTAGAGAATCCAGGAAAAAAAGGTAGGAAGGGAAACCTGATTGCTCTCAAACAGTCTTGAAATTTTACCCTTTTAATTCTGTAGGCCCCTTGAACTTAAAAAGGCATATAGAAACATATATAACTTATGTAAACCAGAATACCCATTGATTTCTTGAGCTAACTGATAGCTAACTAGAAATGGGTTTATTGTCTCACTGCTGTTGTTCAAAAGCTTTCTGAAGAGTATGTTCATTTTCCTGCCTTATTAGTCCCAGTAAACCTAATGGATCATATTGAC TCONS_00126763 TCONS_00126764 s 5' 231546 TCONS_00126763 TCONS_00126764 s 5' 310647 EMBV3_14795 TGCTTCAACGCCCTGGTGCATTTCGCGCTGGGAAAGAATATGGCAAAGCTGATGCAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17663 AGGGCTGTCCTGTGCATTGGAGAACATTTAGTCATATCCCTGTCCCCTGCCTACTAGATG Gene GeneID:540848|B3GNT6:NM_001103307:44_cdna Constitutive 0 NULL GeneID:540848 15 GENE B3GNT6 MGC139087 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase) EMBV3_31821 GGGCGGACGTTGTAGCACCAGAAAGGAGCAGACATTATACTGAGGGGTCAAACAAGATGA Gene BVV0102_238684 - 1 EMBV3_10008 GK000021.2:69436385-69455151 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125573 1 XLOC_077115 NonCoding TCONS_00125573 XLOC_077115 NonCoding NonCoding - 21:69442146-69445158 - TSS94332 3012 1 TCONS_00125573_2 171 0.704847277556441 1 0 0 0 7.68094078443176e-07 0 2.86854699191564e-06 0 2.12977386452389e-05 0 2.6195740100209e-06 0.000147430120531922 4.57911368138966e-05 3.26951113039763e-05 1.9846190880906e-06 7.06658558506686e-06 7.54209309040764e-06 0.00238086007542277 0.00104342749660253 0.00045544635261841 5.95196326112132e-07 0 0 0.000345754149523196 9.03971255837474e-05 0.0004215287444743 2.53031004155396e-05 0 0.00012910109052763 0.000165826351804291 0.000145244859977152 0.000123143333160343 XM_005209638.1 REBK1 PREDICTED: Bos taurus RNA export protein-like protein of BERV-K1 (REBK1), transcript variant X1, mRNA. 0.0 921 81.12 0.328685258964143 NM_003255.4 TIMP2 Homo sapiens TIMP metallopeptidase inhibitor 2 (TIMP2), mRNA. 7e-53 214 86.10 0.0607569721115538 TCONS_00125573_2 sp|P16368|TIMP2_BOVIN TIMP2_BOVIN Metalloproteinase inhibitor 2; 1e-07 50.1 72.73 0.187134502923977 0 noncoding 0 0 0 0 -0.106870911769996 0.347151820840731 -0.00865665939803374 0.887042060272736 NNTTTTCAACATTTAAGAGACCACACCTTCAATCTTTTGATTGGACCCTGATATAGTGTAGGGTTGTTGCCTCATACAGAGACTACTAATTTTCCAAAAACTAAAACTACTATTTTCTCCTTGTTATCTGATTTACAAAAAGAGATTAAACACATAGAGAAAAAATATTCTGTGGGACATATTAGAGCCCATTTTGGCTTGCCCGGCCCTTTACATGAAAAAAATGTTTTGACAGATGCATTGACTAAAATAATTGCTTTAAATTTACATAAAATGATCGACAAGGCCAAAAATTCTCACAAAATTCACCATCAAAATGCAGCTGATTTAAGGTATAAATTTCATATCCCAGCCAGATGTGTTGCTAACTTGTGGGAGAGGGTATGTTGGTATTTTTCCTCAGGACGCAGATTCGCCAATTTGGATCCCGGAGCGGCGCCCCACACCCTCCTCACTGCACCCCGCAACCTAGAGCCGAAAAAGTTTGTGCGGCGAGTGAAGGCCGGAGAAGAGAGCGCACCCGCGAGGTGCCCTCCAGACCAACGCGGCCACGCCGGCGAGAGGGAAATGCCCCGAGCCCAGGCGGCAGCTAGCCGGAGTCCGCGGCCCCCGCTCCTCCGCCCGCCATGGGCGCCGCGGCCCACAGCCTGCCGCGTGTTCTGCCTCCTGCTGCTGGGGACGCTCCTCCCCCGGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCACAACAGGCGTTTTACAATACAGATATAGTGATAGGGCCAAAGCGGTCAGTAAAAAGGAGGTAGACGTAATACAGTAACTTGTAAACGATGTGTGCTTTCATCTTGTTTGACCCCTCAGTATAATGTCTGCTCCTTTCTGGTGCTACAACGTCCGCCCTACCTTACGGTGCCTGTGACTGTGACTTATTGCTATGATAACTATGGTCTTGCTGTGTTGCAACAATTACAAGATTTGATGCGATCACGACGGTTTGTGGGCTTACTTATCTTGAAAATATCAGCTTTAATAACTACAATTACTTCTGTCACTGTGGCAACAATATCATTGACTCAACAAGTACATACTGCTTAATATGTTAATACTGTGCTCTAAAAATGTCTCTTTAACGCTGACAACACAGGAAGTTATAGATAAAAAACTAGAAATAGAGGTAGACGCCCTGGAGGAAGCGGTAATGCATATTGGAACTGAATTACAGACATTAAAAGTAAGGTTGGCACTGTCCTGTCATGCGGACTACCGGTGGATTTGTGTAACACCCCTGAAAGTAAATGAGACAGATTATAACTGGAAAAAAAAATTAGAAACCACGTTTCGGGGGTATAAAACACTTCCAACATTAGTTTAGATTTAGAAAAACTTCACAATCAGATAAAGACCATGGAACACTCCCGATTAGACTTTACTGCCACAGGAACAACAAATGACTTTTTCCATACATTTTCTAACTTTATTTCAAAAAAAACCCCATTCTGTCTACTAATTTAAGCTATGCTGCTGTGGCCGTTCTAATTCTGCTTCTCATAATTATTCTTCCTTGTATTGTCAAAACTCTTCAACAAAACACTCAAAAGCTCGCGACTAAATTACATCTGGCTGTCTTAAAAAATAAAAAAGGGGGAGATGCTGGGAGCCACCACAGGAGATCCCCCCCATGACAAAGGTCATGCGGAGAGAACCTGACAGGCAAAGGCGGATCCGGCCTCAGGGGACCCCCTGAATCTGCTCGAGCATCTACCCCAAAACTGGAATCTGTCTGTCTTACTATTTTGTGCCTTTACCAACTCTTCTGACATTAACAGGGGGCTGTCCTCGACCACCTTTCTCTGGAAAAAGTCAACTTAGGGCTCTAATTAATAAGTCTCCTGGGCATGATAGGAGTGTTTCAATTCAAACCCCTCTGATGGCTTTCTAGCTTGCCTGACAGGTTTATCCATACTCTTGCAATTAACACAAGTAATTGTTCACAACTCCCCAACCTTGAAAGGCATGGGAAGCCAAAACATTCTAAAAGTCCTAATGAGCATAGAGTCCTTTAAGGGATGAAAAATTATTAGAATAGATAGTACTGGTCAAGGGTTTCATTGTTGTGCACCTGGGAGTGCATTGGTTACCATGGTTGGAAGGTAAGAAAAACAAGCAGCAGCCTTGGAATTAACCACATCAGACCTTTGAGCTAACCGGTTCTTTCTTTGTTGTAACTCACTGCACCTTTGCTTCGGGAGAATGTAACTGTTTAGCACTTTCTGAGGTTGACATAGATTAGAAATACAAAGAAAAAACACTTCAAGGGAAAATAAGTTTTCTGGTTGAACAGCTTTATCAAAAAAGGGTCATAAAATGTCCACAGGCCTCCAAGGCCAGAAGATATTGTACACAACATTGTTTATGGGAAAGGTATGCAGAAAAAATCCTGGTTTTGATAAAGACAAAACAGATGTAATGTTTGGGCTGACTCTGTATGACTTTGCATCTTTCATTTCCCTCTATGTACAAGTCAAAGTATAAAAGTTCCTTTTGGAAATAAAGTTAGGGGCCTCGCTCACCGAAGCTTGGTCTCCCTGTGTCATTCTTTTTTTCTTTTCCCCTCCTTTTCTCTCTCTGTTCTTCTTTCAGGATGACTCCTTGGAACACAAGAGCTTTATTGGCTTTCTGTGTTAATCAAGGATCAAGCCTCTTTCTCTTCTCTTTATTCTTTCTCCTTTATTCTCTTATCGGTCGACCCCGGACTATCAGGTTTCAATCCATTGTAAGACCCGTGTCATCTCTCTCTCGCCGATGCCGTCTTTCCTGAGGGTACCCTAGGATGCTGCTGGGGCTGGACCCCGGCACCCAGCCCCTCAAAGAGACCCCTCCTGCAGCCTCGGCCGCAGCCCTGACCGACGGGCCTGGCCCTGCCTGAGCCCCTGGGCTGCAGGCAGAGGCTCCAGGCTGGTTTCTGAGCCAGGCGTAGTCCTTGTTGTTCCGCTTGCTTTCCAGTCAGGAGACTGTAGGCAAGTTTCTTC TCONS_00120209 TCONS_00120208 . 5' 1443 TCONS_00120209 TCONS_00120208 . 5' 1443 EMBV3_33394 CTGACACATGAGGGAGCTTGGGTGGATGACTAAAGGCAGGGAGGGGGGCTTATTTATGAA Gene GeneID:280845|LTA:NM_001013401:18_cdna Constitutive 0 NULL GeneID:280845 23 GENE LTA NULL lymphotoxin alpha (TNF superfamily, member 1) EMBV3_19814 GTGAATGAAAAGTGCAGACCTACCTGCCCTGAGACCAGATTCCGCAGTGGGAGCATCATA Gene GeneID:281567|UMOD:NM_174213:285_cdna Constitutive 0 NULL GeneID:281567 25 GENE UMOD NULL uromodulin EMBV3_11932 CTAGTCTTTCTCTGACCCAATCTCCCAGGAGCCCATACAACCCCATCACCTGCCTAAGTA Gene BVV0102_340601 + 0 NULL GK000018.2:2858814-2866948 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085235 TCONS_00085236 1 XLOC_051821 Coding TCONS_00085235 XLOC_051821 Coding Coding CHST6 18:2863449-2871152 j TSS63700 4977 1 TCONS_00085235_3 395 0.106690777576854 3 0.354193715917943 0.00135506155033291 0.00138498252391224 0.000840578874090041 5.21602644855999e-10 0.000675695306613767 0.000420413976865423 1.27024236605499e-07 0.000486685085212339 0.00078788902076743 2.48859235250053e-12 1.37932239273283e-06 1.88643089455586e-12 6.68967525373548e-05 4.91464896476036e-05 8.07579489997564e-05 4.91216502396488e-05 0 0 0.00143515794325206 0.0014061028971941 0.000525165899556932 0 1.84115793135218e-06 0 0.0012147024408508 0.000939979553220053 0.00213835430774437 9.45634568775894e-05 1.95069973293061e-05 0.000209587498292149 XM_005218362.1 CHST6 PREDICTED: Bos taurus carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 (CHST6), transcript variant X1, mRNA. 0.0 8890 100.00 0.990154711673699 NM_021615.4 CHST6 Homo sapiens carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 (CHST6), mRNA. 0.0 1480 84.59 0.269238497086598 TCONS_00085235_3 sp|Q9GZX3|CHST6_HUMAN CHST6_HUMAN Carbohydrate sulfotransferase 6; 0.0 677 88.80 0.992405063291139 2 coding 0 0 0 0 -2.67328430389094 0.0153719252972513 -0.0845613591827721 0.297458084483668 ATCCCAGTGCCTGCCTGACATGTTCTTCCTCACTTGAACCCTGGGCCAGTTGGTGGTGTGCTGAATGTAAGGCGCCTTCTCAGAAAACGCCCAGCTGGGACCTGGATTCTCTGGACACCCTGAGTGTGCAGGATGCTTCCATCTTCTTCCTAATTCTTGAGTTCCAATCGGAGGATCCGATAACAGTTCCTGTACAGTGCCCTGAAAAACCTCCAGGCCTCTCCCATGGACCTGTGATCGAGGTGGGCAGCCCTCCCAGCAGCCAGGGACAGCAGTCTCCGGCCGGCGGCATGTGGCTGCGGCGCGTCTCCAGCACGGCGGTGACTGCGCTCCTGCTGGCGCAGACCGGCCTCCTGCTCTTCCTGATCTCCCGGCCCAGACTGCCGCCTGCGGCCAGCAGCGAGGAGCGGGTGCATGTGCTAGTGCTGTCCTCGTGGCGCTCGGGCTCGTCCTTCGTGGGCCAGCTCTTCAGCCAGCACCCCGATGTCTTCTACCTGATGGAGCCCGCGTGGCACGTGTGGGCCGCCCTGTCGCAGGGCAGCGCCTTGGCGCTGCACATGGCAGTGCGCGACCTGGTGCGCTCAGTCTTCCTGTGCGACATGGATGTGTTCGAGGCCTACCTGCCGTGGAGGCGCAACCTGTCGGACCTCTTCCAATGGGCGGAGAGCCGGGCTCTGTGCTCGCCGCCCGCCTGCAGCGCCTTCCCGCGCGGCGCCATCAGCAGCGAGGCGGTGTGCAAGCCGCTGTGCGCGCGGCGGCCCTTCAGCCTGGCGCAGGAGGCCTGCCGCTCCTACAGCCACGTGGTGCTCAAGGAGGTGCGTTTCTTCAACCTGCAGGTGCTCTACCCGCTGCTCAGCGACCCAGCACTCCACCTGCGCATCGTGCACCTGGTGCGTGACCCGCGCGCTGTGCTGCGCTCGCGCGAGCAGACGGCCAAGGCGCTGGCGCGCGACAACGGCATCGTGCTGGGCACCAACGGCAAGTGGGTGGAGGCCGACCCGGAGCTGCGCGTCGTGCGTGAGGTGTGCCGCAGCCACGTGCGCATCGCCGAGGCGGCCACGCGCAAGCCTCCGCCAGCCCTGCGCGGCCGCTACCGCCTGGTGCGCTTTGAGGATCTGGCGCGGGCGCCGCTGCCGGAGATCCGAGAGCTGTACGCCTTCGCGGGCCTGAGCCTCACGCCGCAGCTCGAGGCCTGGATCCACAACATCACGCACGGCGCCGGGCCCGGGGCGCGCCGTGAGGCCTTCAAGACCACGTCAAGGGACGCGCTCAATGTCTCACAGGCTTGGCGCCACGCCCTGCCCTTCGCCAAGATCCGCCGCGTGCAGGATCTGTGTGCCGGAGCACTGCAGCTGCTGGGCTACCGGCCAGTGTTCTCCGAGGACGAGCAGCGCGACCTCAGCCTGGACCTGGTGCTGCCGCGCGGCCCCAGCAGCTTCAGCTGGGCCTCGTCCACTGCTGAGCGCCCCGGGCCGTAGTGGAGGCCCCCAGCTGGCGGTCACCAGGGCCAGGAGACCCACGCGTGGTGCCGAAGGGGCTGGGCACGAGGTGGCCCAGAGTTTGGGAGGTTCCGCCTGTAGCAGGCTAGGACCGAGTTCCCAAACTAGTTTCTTTCTGCCCACTTCTCTTTCTTTCGAGTCCTCTTTAGGAGCTGAATGGTTTCCCCTGGTAGCTCAGCAGTAAAGAATCTGCCTGCAGTGCAGGAGACGCAGGTTCGATCCCTCCCTAGGTGGAGAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCACTATTCTTGCCTGGAAAATCCTATGGACAGAGGAGCCTGGTGGGCTGCAGTCCATGGGGGCAGAGAGTCAGACGTGACTGAAGTGATTAAGCAACAGCAGGTAGGAGCTGAATTCCTGACAGCAACACTCTTCATAGAAAGCAGACTGGTTCCCCCACTTCTCCTGAGTGCAGGGAATAAGTTCAAAGACTTGGCTCCTTCTCCAGCACTTTCTTTCCCTCTCAGTCTCCCTCAGGATGCTTCATCCTGCAGCTGAGAAGGCTGGCCCAGCCCTACTTGGGACAGGAAGGGTACTGTGGCCAGCTGGCCCCTGAAGTCAGTACATCTTCCCCTCCACTGCACCACCCCCAGACTCTGTTCCCCCAAATCCTCTGGCACCACGTGCCACCAAAGCCAATGCTTTTATATTCATCTGTGTCTTCAGGAAGAAATCAGCCAAGCCTATATCTTGGGGTCTCCCCCTAGTCTTTCTCTGACCCAATCTCCCAGGAGCCCATACAACCCCATCACCTGCCTAAGTAAGGTGAACCTTTGATTTGTCCTGATGGGAAAGCTCCTACTTACAGAAATAAACATATTTAACCTGTATGATACAAATTAGAGTTTACGGCCTGTAAAGTTGGAGAAGCAAAATGCAAAAGTGAAGGGACTTGTCCAAGGCTACGGGATGAGAAGGAGGATGAAGAGAGGGAGAGGGGTTTGCTCTGAGACCACAGTGGGGAGGAGAGGGGGCATCAGGCTTGCAGAAACCTGTTTCCCGGACCAAGAAGGGTCAGATTTTCCCATCCTGTTTGCCCAAGGGCTCAGCAGTCGGCAGTAGCTAGGACCGCAGCTGCAGGGTGAGATGTGGGAAGTGGTAAGCTCGGGGTTCAGAGTGCAGAATCTAGGGAGCTTCCTGGATAAGCCTGGAGGGAGGCAGTGAGCAGGCAAAGTAGAGGGAAAAAAGGCTGGGCAGGCCTGGGCAGCAAGCCAGGCAGAGCGTGTGGCAGAGCAAGAGGCTGGCAGCAAGATCAGTGCCCGGAGGGCAAGTCATGGGGTGGATGTAACCAGATAAAGCTTGCCAGGAGCTTGGAAGAAAAAAGGCTCTAGGGTGGCTGTCTCCCTGTGGTCCTTCTGTGCCAGGCCCTGGAGGAGAACAAAATACGATTCCTAGCTGCAAGCTACAGCACCTGGCTCTGCCGGCAGAGGGTCTTATGAAACAGAAGCTGGATTTTAAAAAAGGAGGTGGAGGGTAGGCGAAGGGGGAAGATGCGGATATGTAAGAGCTAGTCTTAAATTCAGGAAATGAAAGCCAACAAGTGCTCCAAAAATGTTGAAAAGGAGGGAGAAGGGTCACAGAACCTCTGGGAAGGACAGGGAAGAAGATTGGAGTCCGTGCAAATAGAATACCCGTCACACTGGAATACAGAGCTGGGCTGCAGACTGACAGTTAACCACCAGAAGACCTTAGCCCGTTCCCGCTGGGAGTGAGGATCTGCCCTCACTGAGGCCATCAGTCACTAGGAGGGATTCTGGAGGTTGCTGGCTTCCTGTTCTCCGCCTGGATTGGTGGGACCTGGATTGCAGACCCATGTCCTCACTGAAAAGCAGGCAGGTCAAGGGCAGTGTGGCACCTTCCATTTCTTCCTCGCAGGGAGCAGATGGATACTGACCTTGAAGCCAAAACTTCAGGATGCCTCAGTTAGGGACCCGTCTAGCTGTAGAAACTTTGGGCCCCATAAAGCCTCCATTTGCCCCTTCTCACAATAGAAGAAGGTATTTAAAATGCAGAATTTATTAATGACTTAGGCTAGGGTCACATGGGGCTTAATATATGGGCTGGAACTCAAACTTACATCTTTGACTTCAATGCTTGTGGTTCTAACAAGTAAATTGAACTGGGGATGGAGCAGAAGCTTCCATCATAGGCTTCAAAAGGCAGATCATCACCCAGAGATCTGCGTCTCTGGGTGTCAAGGAGCTGTCCTGACACTTTGGGTTTTTCTTGTTTCCAGTTTTATTGAGGAAGAATTGACATACATCACTCTCTAAGTTTAAGGTGTACAGCATGAGGGTTTGATTTACCTACATTGGAAAATGATTACCATACTAGGTTTAATTAACATCAGCCATCTCAGATAGATACAATAAAAAGAGAAAAATGCAATTTTTAAATTTATAAATGTTACAAGCGGGAATTCTCTGGCTGACCGGTGGTTGGGACTCTGCACTCTCACTGCTGAGGGCCGGGGTTCAGGCCCTGATGGGGGAAATAGGATCCTGCAAGCCACATGGCATGGCCAAAAATAAAATGAAAATGTTCTAAGAGATGGAGATTTAATGCCTCCACCTCTTCTCCTCTTCTCTCCGAAATTTTATTGTACTTTTAATTATATAATTGACCTACAGTGCTATATAAGTTCCAGGTGCACGACATAGTGATTTGATATCTTTAAATGTTGCAAAATGATCATCTCTGTCCTGGCATTGAGCTGCAAACATCTCGGGGTGGGCAGTGGGCTGGTGCAATGGGGCTCCTGCCACCGGCCCCTTTCCTCCCCATATGTGGCCCCTCCACCCCAGGATAGCCTCTGGGGATAAAAGCAGACTCCTGGCTCTACCTGGAAGGAGCACATGGTTAAGTGGAAGAGTCAACCAGGAAGTCTGCAACGTGCTATGTTCGGGCAAAGAAGGTCCAGCCAGAGGGTCATGGTGCCAGAGGCTGACATGCAGTCACCAATCCCTAGTGGGATCCAGGAAGGCATTTGGGTTGGGGCTCAGAGCCCAGCCTGATACTGGCATCCACAAGTTTCGTTTGTCCCTGCCAGGGTCACAGACTGTCTTGGCGCCAGCACAGTGAATGGCTTTTGCTGTGTGACTCACTCCTTTTCACCTGTCTCCGAGGTTCCAGGATGCCAATGACTGGCTCTCAGATGCTGCTGCCCGCGTATGGGGCCTTCTGGACAAGTCTCTGCGTGCAGCAGGTTTTCAGCAAGCCCCTAGGTGAACCCAGATAAGGTTTCAGGACAAAGACAGACAGTGCCCAGTCCATTGTTTTCACGAGTTAGCCCTGGGTCAGGCCCTGGAACAGAATAGTCACAGCCTTTGCTCTGGTGGGGAGTACAGACAGTAAATAAAAAGTCCTATAAATAAACATGCTATGCTAAGTCACTTCAGTCGTGTCCGACTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCC EMBV3_03432 CAAGGACAAGAGCTGTCTCAGCCCCCAGCCCTCTACTCTCACAAAGGAAAGAAAGGGAAA Gene GeneID:504968|ABLIM1:XM_002698530:187_cdna UTR3_Alt 2 NULL GeneID:504968 26 GENE ABLIM1 NULL actin binding LIM protein 1 EMBV3_17188 TGGTGGCCTTCTCCTGCTCATTGCCTCACTTCCACTCACTCCTACATACACTTCTGCTGA Gene GeneID:509074|LOC509074:XM_002691548:4_cdna Constitutive 0 NULL GeneID:509074 11 GENE LOC509074 NULL similar to olfactory receptor Olr418 EMBV3_33992 TCCGGACAAGAGCTCACAACGGCCAAAGCTGGGACCATCTAAGGAACAAAATAAAGTTGG Gene BVT0102_185668 + 0 NULL GK000006.2:119145985-119314724 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04926 GAATCATACAACATGTGATACCTCCATGATAGAGAGATACTGCTATTCCTTCAGGGGGAC Gene BVV0102_421558 + 0 NULL GK000007.2:98135378-98155673 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218142 TCONS_00218144 TCONS_00218143 1 XLOC_131634 Coding TCONS_00218143 XLOC_131634 Coding Coding PCSK1 7:98153502-98172795 j TSS162253 3620 1 TCONS_00218143_4 347 0.0494475138121547 6 0.81266846361186 0.000804072890618056 0.000915146219301613 0.000733198435285201 0.000648168772627264 0.000301364605053711 5.18622774023285e-10 0.000535970091967556 0.000597868012580389 0.00110334671820079 0.000178438996531381 1.06672560649215e-05 1.4886676151129e-05 1.98813854027732e-05 0.000851582349317483 5.15188507518147e-05 4.87627609768902e-10 0 1.38206710256277e-05 0.00152039062312756 0.00156698342672261 0.000258519331444203 1.25482948126587e-10 0 9.25954263289376e-05 0.000493369995453965 0.000371704524960966 0.000331952476968781 4.10207875585602e-11 8.35745106778049e-11 6.23038663771343e-06 NM_174412.2 PCSK1 Bos taurus proprotein convertase subtilisin/kexin type 1 (PCSK1), 0.0 2504 99.43 0.387292817679558 NM_000439.4 PCSK1 Homo sapiens proprotein convertase subtilisin/kexin type 1 (PCSK1), 0.0 2037 78.04 0.69060773480663 TCONS_00218143_4 sp|Q9GLR1|NEC1_BOVIN NEC1_BOVIN Neuroendocrine convertase 1; 0.0 721 100.00 0.997118155619596 2 coding 0 0 0 0 -0.166116645429784 0.471959459610539 0.230707477656174 0.0365955288510117 CCAGAGCGGAAGAAGTAAGGTCTTATGAAGGCAAGCAGTTACACAGTCCCAATCTCACCTGGCGAGATATGCAGCACTTGGTTGTATGGACCTCTGAGTATGACCCACTGGCCAATAACCCTGGATGGAAAAAGAACGGAGCAGGCTTGATGGTGAACAGTCGATTTGGATTCGGGCTGCTAAATGCCAAAGCTCTGGTGGATTTGGCTGATCCCAGCACCTGGAGCAGTGTGCCTGAGAAGAAGGAATGTGTTGTCAAGGACAATGACTTTGAGCCCAGAGCCCTGAAAGCTAATGGAGAAGTCATCATAGAAATTCCAACAAGAGCTTGTGAAGGTCAAGAAAATGCTATCAAGTCACTGGAACATGTGCAATTTGAAGCAACAATTGAATATTCCCGCAGAGGAGACCTTCATGTCACCCTCACTTCGGCCGCTGGAACCAGCACCGTACTGTTGGCTGAAAGAGAGCGGGACACCTCTCCCAATGGCTTTAAGAACTGGGACTTCATGTCTGTTCACACGTGGGGAGAGAACCCCATAGGCACTTGGACTTTGCGAATTGCAGACATGTCTGGAAGAATACAAAACGAGGGAAGAATCGTGACCTGGAAGCTGATCCTGCACGGGACCTCTTCCCAGCCAGAGCACATGAAACAGCCCCGGGTGTACACATCTTACAACACCGTGCAGAACGACCGAAGAGGCGTGGAGAAGGTGGTGGACTCCGGGGAGGAGCAGCCTACACAAGAGGGCCTGGATGAGAACGCTCAGGCATCCCAAAGCCCCAGCGGCAGTGGAGTTGGGGGCAGAAGGGATGAGCTGGCAGAGGGTGCCCCTTCTGAGGCCATGCTGAGACTCCTGCAGAGCGCTTTCAGCAAAAACTCACCCTCAAAGCAATCACCAAAGAAGCCCCCAAGTGCGAAGCCCAACATCCCTTATGAAAACTTCTATGAAGCCCTGGAAAGGCTGAACAAACCCTCCCAGCTTAAAGACTCTGAGGACAGTCTGTATAACGACTATGTCGATGGCTTCTACAACACGAAACCTTACAAGCACAGGGACGACCGGCTGCTCCAAGCTCTGGTGGACCTTCTGAGGGAGGAAAACTAAAATGCGTGCTGGTCCGAAGCTGGAGATAGTCACACTTCTTCCTTCCCCCTTAGATTTTGCCTGTGTCTGAAGTGGGTGTTTTGTCATTGATTCTTCTGCTTCTAATATCCTTTGTGGTACTTTTTCTTTTTCTCCCTAAACTGGATATTTGAAAGCTAGGAGCTCAAGCAGTAAATCCAACTTCCTGAATTGATTGCACAAAGCACGTCTTCCCTGCTTGCACAAGTCAAATGTTTTGTTCTTTCTGGGGCCACAGTTCACACCTGGTCCTCATACCACACGAGAACGCCTACTCGGGCCTCCCATTTCATGTCTCAAAATAAAAGGTACACAGGGCAACAGATTACTTTGAAAAAGCAACCTGCAAAAAAAAATGAGAGGAAGGAAGACAGTTTCTAATAGCTTGTCCCCTGTCTTTGCCATACGATTCTTCAAATTTTGATGCCAAAGAAGGGCTTGGAAAGTCTCTAATGAAGGAGCTCTTAATTAGATTCATATCCCAGGCTTTTCTGCTCCAAAGTGCTGCTCATTCAGGAAGAGGCCGTTAGGTCACTTTGGGGAAAGGCTGGGTTATTCAGATCCGGAAACAGGCCTCAAACCCTGCACTGGCTGGTGTGAGCAGTTTCAGAATATTCTTTGCTTGGTGTACCATGGAGAGGCCTCCATGGATCTGAAGGTGACTGCGACTCAAGCTGTGAGTGCTGGCCTTCCTCTCTTCCCCCTCACATTCTCCTTTCTCAGCCACAGACTAAATACTGAGAGAGCTATTGATACCAATTTCTTAGAACAAGCTTGTATTAGGGACTTGGCCAATTCCTAGTCATAATTTTTGTTTTAAATGGTCATAACAGGAAATCACCACTCATAACATGGAAAAGCAATGTAATAAGAGGAACATGTTCATCATAGGGAGAGCCAATGGAAGGTTTTGTTGTGTTTTAAACTACATTCATTAGAGCAGGTTTTTCTGGATCTTTGAGTTTATGTTCTTTGACACCGAAGGCGCTTCTCCAGTCTTACAGATGATAGTCTCCAAATTCTCAAATTGTTTCCAAGCTTCAACTCAGAGGACACAGGCTGGCCGCCCACAGGCAGCATCTGACCCTCAGCTAGATTTTGTCTGGCATGTTAAATGTTTTAAAAATGGGAGTGATTATTGGAACTGTAAGATTTCACATAAAACCTGACTGTCAGATGCATCTTCCCTCGCAGCAGCAGCTGACCGGAGCTGAGTAGCAGCTGCCGAGCAGTTACAGACTTGGACACACGTCCCATGGTACCCTCTCCACCCATGCTGCTTATCACGGCCGCCTGACCGGCACGCGTTCATTAGGCATTTGATTTTGCCTATTCCTGCACTAAACGAACATGCACAGTGTAAAGGCATTAGGGAAAAAATATCCCCAACTTCTTTCAGGTAGGAGCTGTATGATAATCAATAATTACAAGAATTTGTCATGATCTAATTTATTGGCCAAAAAAGAAAAGGTATTTTAGACTCTTGAAAATACCCCTGAAATCTTGTTTTACTTACGTGTTTTATCTCACCTCACCCAGATGCTCACATATTCTAATTCATGAATTGGCCGAGGCCCTAGTTTCTCGCTCTCACAAAGGCTCCAGTCACTGACAGTACTGGCATTCTCCCACTCAGTCGGCTGTTTGCGATCCTTCCATGAAGTCTGAACTTCATTAGGCTGCTGGACCAGGAAGAGAACGCCACTGAACTAGATCAGGGGAACCCTAGGGTCTGTCACTTGCTTTAAAGTGAATTTGGTAAGACAGACTTTCACCCCCGATTGTGCAGAATGAGGGTATTTCTAGAGCAATACGCACGATGTATTGAGGATGTCCCCCTAAAGGAATGGCAGTATCTCTCTATCATGGAGGTATCACATGTTGTATGATTCACAGTGTTAAATAGAATTTTGGAAAATTGCAGCACATCAAAAAGTATTACATAAAGCTGAAAAGTACCAGAGAGTTACAATGAAAAAAAAAATAACTAAGTTTTCAATGAGTTAAAAATAAATCAATGAAAAAATAAAGCTAAGGCCCAGAGAGGCCAATAAAAAATGACAGATGAAAACACCTCCTGACCCCATTCCCAAACTAGTGCTAATTTGTATGAAGCTTTCTTTTTCATCCTTCTAACAGTATCTTTTTCTGGTTAAAACCCCAACCAACCATTGGACCATAGCCAAAGGTTCAATCAAGAGAAGCTTTAATAGTTAAATAAAGTCATGTTTGAATGTTTCCAACATGGAACATATTGTTCAGACTTGAAATATTTTTGTCAGTCTTTCTTAGTACCTGTGTGGATTTTTGTGAAAATGTAAAAAGAAGAAACTTATATAATATTTCCCTCAGAATTTTAAACTATATTTTCTTTACAGGTATTTGTAATGCTTTACCAAATGCTTTTATCAAACAGAATTTTAAAAGGCATAATAAATTATATTAAAAACCAAAATTTTCCTGAGAGTAAAAACATTTCATCCAATAAAA EMBV3_20140 GGAACAAGTGGAAGCCTATCCCACCAAGACAGAGGCATAGGGGGAGGATTGCAAAAGCAT Gene GeneID:520800|TFE3:NM_001075811:78_cdna Constitutive 0 NULL GeneID:520800 X GENE TFE3 NULL transcription factor binding to IGHM enhancer 3 EMBV3_25487 TTTATCCCACTCTGTCCTCTGTCTATACTGTAGCCCCTAAACCTGTGACCCTCTCGGATG Gene BVV0102_216967 + 1 EMBV3_07111 GK000029.2:45947884-45957174 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11963 CAGAAAATGATGTCCAGGGCTGAGGGAGCTTGTCCGCTGACCCACCTTCTTGTCCAGCCT Gene GeneID:524593|LOC524593:XM_002698179:689_cdna Constitutive 0 NULL GeneID:524593 25 GENE LOC524593 NULL similar to opposite strand transcription unit to Stag3 EMBV3_10783 ACCAAGCTTTGCCACTTTTCTTCTCAAAACATCCCAACCAGAAAGGTCAGTGTGAAGGCC Gene GeneID:614517|GAS7:NM_001102280:99_cdna Constitutive 0 NULL GeneID:614517 19 GENE GAS7 MGC148890 growth arrest-specific 7 EMBV3_24758 ACTCCTGACACCATGGCCTGTTGCTCCACCAGCTTCTGTGGATTTCCCACTTGCTCCACT Gene GeneID:540285|LOC540285:XM_002695973:315_cdna Constitutive 0 NULL GeneID:540285 19 GENE LOC540285 NULL similar to keratin associated protein 1-1 EMBV3_20844 GGTGCCCGATAGTCAACTAGAAGCGTCAGAGGTGTGCCAACAACAGTTCCAATGGCTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18537 AGAACTTCACACACTTGGGACCGCCTGGTCTCCTGTATTTTCACTGGCCATTTTGGAAGC Gene GeneID:505849|TFAP2A:NM_001080228:208_cdna UTR3_Alt 2 NULL GeneID:505849 23 GENE TFAP2A MGC151772 transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) EMBV3_08702 TGGACCAAGTGCATGAACCACCTCACCGTCCACAACAAGGAGGTGCTGTACGATCTCATT Gene GeneID:785078|LOC785078:XM_002687406:118_cdna Constitutive 0 NULL GeneID:785078 5 GENE LOC785078 NULL similar to tafazzin EMBV3_15093 AGTTTCTACCAGAGACCACAGTCAATTGGGAGGAATCGGAAACGGAGACGGAGACGGAGA Gene GeneID:317693|AEBP1:NM_174839:19_cdna Constitutive 0 NULL GeneID:317693 4 GENE AEBP1 NULL AE binding protein 1 EMBV3_11091 TGGCCACAGTTGACCGGGACCTTAAATGAAGAATCTGGAAGATCCCTGGAGTTCCCATCA Gene GeneID:783253|LOC783253:XR_083796:250_cdna Constitutive 0 NULL GeneID:783253 11 PSEUDO LOC783253 NULL similar to rRNA-processing protein FCF1 homolog EMBV3_01322 TGAATCAATCAGGAAGCGGTTGCAATCTATGGTCCTGGAGGCAATTACCACTCCCTCACT Gene BVT0102_178898 + 1 EMBV3_19249 GK000007.2:57035181-57200806 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217241 TCONS_00217240 1 XLOC_131467 NonCoding TCONS_00217240 XLOC_131467 NonCoding NonCoding - 7:57101385-57143294 - TSS161832 888 2 TCONS_00217240_1 45 0.676801801801802 3 0.978882313639401 0.000508607433658677 0.000488441905386164 0.000764474737768376 0.00179548497875136 0.0019726011067523 0.000323264323834448 0.00139507336539109 0.000631725457981732 0.00259448084320748 0.00118152656455334 0.00019365174897634 0.00105094238088597 0.000224023843060858 0.00122632019432375 3.31283784676383e-05 0 0 0 0.00250852645447561 0.000954053127415289 0.0033810095950638 0 0 0 0.00262264260626708 0.00359933115071367 0.0011150631416559 7.51572142052575e-55 1.09038341132155e-05 0 XR_231742.1 LOC101906285 PREDICTED: Bos taurus uncharacterized LOC101906285 (LOC101906285), 0.0 699 100.00 0.434684684684685 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 3e-13 80.6 69.84 0.207207207207207 0 noncoding CAATTCCTGCCCAGAACCTGCTGTATCTCAGAACCAGCCATGGCATCAAAGCTTCCTCCTCACATCTCTGTCTCTTCTGGTCTTCAGGGCTCCTGTAATCACATTGGGCCCATCTGATAATACAGAAGTGTCTCCCTATGCTGGGCGTGGAGAAGGAGCAGCTTGGAATGGCAGCGGACAGCCAGAACAGATGGACAGCAGCTGAATCAATCAAGAAGCGATTGCAATCTATGGTCCTGGAGGCAATTACCACTCCCTCACTGAGAAGTCAATGAAAAGGATACATCAAAGAGTTATTAACACACTCATAAATTTGTAAAGCATCTCCTAACGACACCACTATAACTATCCCCATGTATAATGGCTTCATAATTTTATTTGTTGAAGTATAATGTACACAAGTGAAATGTTTATATCTTAGGTGTGCTGTCCAATCAGTTTTGATAAATGCATATACTTTTGCAGACTATGCCCCTATCAAGACACAGAGCATTTCCTTCAAACCCAGAAAGTTACTTGTGTCCCTACCCAGGCAATGCCCCTCTCAGAAACAACAACTAATCCTGTTATTTGTCACTATATTCCAAAGTTTCATATAAATTGAATCCTGTAGTTTGTCATCTTTTGCATCTTGCTTTTTTATTTAGCATAATATTTTCTGAGAATGACTCATATTATTTCAAGTACCAGTAGCTGATCCCTTTTTATTGCAAAGTAAGATTCCATTATAAGAAAATACACAGTTTAATAATCCATTCTTCTATTGATGGACATCTGGGATGCTTACAGGTTGGAATTGTTATGAAAAGAAGATTCTATGAACAATTTTATTTTCCTTTTTGGTGTAACTATGTTTTTGTTTCTCTTGAATAAATATCTTGGAGTAGA TCONS_00217242 TCONS_00217243 TCONS_00217244 TCONS_00217245 s 3' 95856 TCONS_00217242 TCONS_00217243 TCONS_00217244 TCONS_00217245 s 3' 54602 EMBV3_15990 CATACATGACAGCTCTTTGTTCGGAAGGTAACAGGAAAGACCTCGAAGATTCTGCTACCG Gene GeneID:281790|GNAI1:NM_174324:5_cdna UTR3_Alt 2 NULL GeneID:281790 4 GENE GNAI1 MGC128528 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 EMBV3_05361 ACGTGTTCCTCATGATCCGGCGCCACAAGACCACCATTTTCACGGACGCCAAGGAGTCGA Gene GeneID:617277|TCEB2:NM_001034800:282_cdna Constitutive 0 NULL GeneID:617277 25 GENE TCEB2 MGC128636 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) EMBV3_13417 CCGCATTTCTGTAAGATCTGGGAAACATTCCTTTCATCTCAGGTACGAAGACTCCAGCTG Gene BVV0102_294645 + 1 EMBV3_43281 GK000026.2:44397477-44416759 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18464 AGTCGAGAAGCACTGGATTTCCTGGAACAAATTTTGACATTCAGCCCCATGGATCGGTTG Gene GeneID:538094|MAPK6:XM_002690965:345_cdna Constitutive 0 NULL GeneID:538094 10 GENE MAPK6 NULL mitogen-activated protein kinase 6 EMBV3_05256 GTGCGACGACCTGTTTCGCTTCAACAACATAAAGGGTGGATTTTTTGTTGATCTCTTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18539 CATTCGTTGGCTGTGGTCCTATCTAATTCCAGTTGTACTGCTAGCCCTGTCTGTGACCAC Gene GeneID:785362|SLC6A16:XM_002695208:919_cdna Constitutive 0 NULL GeneID:785362 18 GENE SLC6A16 NULL solute carrier family 6, member 16 EMBV3_02149 ACCCAAATCACCATCTGCCACTGGCATCATCATATAGAAGTAAAGAAACTTTAGTACCCT Gene GeneID:789567|LOC789567:NM_001101307:120_cdna Constitutive 2 NULL GeneID:789567 15 GENE LOC789567 NULL similar to steroid dehydrogenase homolog EMBV3_10260 TTCAGTGTACCAGTCTCATTGCCCTGAATGTGGGCCTGAAAAGCTCTGGGACTGTGGCAA Gene GeneID:783258|DCP1A:NM_001102330:340_cdna UTR3_Alt 2 NULL GeneID:783258 22 GENE DCP1A MGC159576 DCP1 decapping enzyme homolog A (S. cerevisiae) EMBV3_32049 CTTAGATCACACACCTGGCGCGTAAAGGCAGGCACTCAAGAAATGAATGGGTAACAGAAG Gene GeneID:531418|CLASP2:XM_002696923:457_cdna UTR3_Alt 2 NULL GeneID:531418 22 GENE CLASP2 NULL cytoplasmic linker associated protein 2 EMBV3_07756 ATGATGCTTCCCATGAGACCCAGGAACCCGAGTCCTTCTCAGCCTGGTCAGATCGCATGG Gene GeneID:514369|NFKBIL1:NM_001015597:123_cdna Constitutive 0 NULL GeneID:514369 23 GENE NFKBIL1 NULL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 EMBV3_07407 ACTGACGTTCCTGGGGAAGTACCGCGAGTTGCACCGGTTATACGCAGAGAATTGCTTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32655 GTACAAATAATATTGCCTTGATGTTTCTATATATAATGTCAGATGTTTCAGAGATGACAC Gene GeneID:523515|GABRA5:NM_001075844:26_cdna Constitutive 2 NULL GeneID:523515 21 GENE GABRA5 MGC139683 gamma-aminobutyric acid (GABA) A receptor, alpha 5 EMBV3_09536 TCGCGCCGAGGAGGAGCTGGCGCTGCCCGGTGGGTGCCATTCATGGAAGAAGACTGCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22365 TCTGCCCACTCCTGGCAGACCCCTCGGGAGCAAAGCTGCACAAGGTCGTTGAGCCCGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39517 AGGCCCGAATGGACAGAGAGAAACTGAGGGTGAGAGAAGAGGAACACAGAGACTGAGACA Gene BVT0102_225655 + 0 NULL GK000007.2:12658974-12678438 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27719 TTCTTCCCTGGAGTGGCTTATGCCCAATCGCTGGTTAGCGAGTCCTGTCCTCGGCTCAGC Variant GeneID:512690|FBXL6:XM_002692543:160_cdna 572^635 2 EMBV3_12169 GeneID:512690 14 GENE FBXL6 NULL F-box and leucine-rich repeat protein 6 EMBV3_23253 GCTGTCACGTGTGATGGCCTTTTTCTTCTGGCCGTATCTGCCTGACGGTGTTTAAGGTAT Gene GeneID:280875|CPSF4:NM_173942:26_cdna Constitutive 0 NULL GeneID:280875 25 GENE CPSF4 NAR cleavage and polyadenylation specific factor 4, 30kDa EMBV3_07185 GTTGTGAAGTAACATGCTGCCCTTTTTGATTGCTGGCGCTTTTGTGAGCACTTCAGATGC Gene GeneID:540235|TPD52:NM_001076922:58_cdna UTR3_Alt 2 NULL GeneID:540235 14 GENE TPD52 NULL tumor protein D52 EMBV3_19645 GAAATCCACAGAACTCTGAGTTTCACCGTGTCTCCGAGAATCCTTGACTGTTGGCCTCTG Gene BVV0101_084219 + 0 NULL GK000009.2:39259896-39309709 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33328 GGACATTGTTACGTTTAGACAGTGTTTGGTCAGTATTTGACTTAGTTTCAAGTTTCCTGC Gene BVT0102_169816 + 0 NULL GK000009.2:28544699-28618225 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00239595 1 XLOC_146261 NonCoding TCONS_00239595 XLOC_146261 NonCoding NonCoding - 9:28613599-28614536 - TSS179273 937 1 TCONS_00239595_1 49 1 0 7.26023274346773e-05 0.000225205839073851 0 8.86248208347298e-06 5.26913980505702e-06 1.52702518503451e-05 3.11190460746282e-05 6.31239674870218e-06 1.68412780397452e-05 0 0 0 0 0 0 0 0 0 7.65307950708481e-06 1.534991207289e-05 6.47967483336277e-06 0 0 0 2.95772820506998e-05 2.25575588910712e-05 4.37716544312586e-05 0 0 0 NM_001010852.3 CLVS2 Homo sapiens clavesin 2 (CLVS2), mRNA. 3e-58 230 71.37 0.452508004268943 0 noncoding 0 0 0 0 -0.0145286820960735 0.910150170126547 -0.0161811277720229 0.751985751283545 ATTTTTTTCATGTTAAACTGAAAATTTTATTTTACTTAATATTTTGAACCAGAATTATTTTATAGGATTTATTTAAATCAATGTTTTTATAATTAGCTTCTTGTTTAATCCAATAAATTTGCATGAAAATGTTATTTTACTTATTGATCATTCCCACTGCTCCATGAGACTTAAAAGTTAACTTTCTTCTTTCAAGCTGTCCTTTGAAGGCTTGACTAGAAGTTACAACATACTGAAAATGTAATTTTGATGAAATTATGTTTTTCCCTTTAACCCCAAACATACATGTATCAGAAAATTTCAGGTGTCCTAACCAAAATGGCTAACTACAATTTCCCTCAAAATGAAATTACTGTTGTCCATTTTTAGATGACATTTTAGAAATCTCCATTTCATAGATGCAACAGATCCACACTACAAAATTCAACATTTACCATATGCAAAATAAAGACTTTTTTAAAAGCAGAAATGTATATTTATTCAAAATTATATCATTTATAATACTGTATTATAATAAACAACTCCCTCAAAAGGTCAAAGGTAGCTGAGCCAAATAGTAAAGAGTATGCTTAGTAGTATTCTTATTTAATCTGGACAGTTTTGAAAACAAAAATTACTTAGGTTGGAAAGTTTCATTTATCTTTTACAGAAATATGAAAACTGAAAGACTGAATTAGAAACGAGACAAAGCTTTGAACCTCTGTTATATGTAAACCAATTATAATCCATTGAAATTTTTTAATACGGTTTAGGATTTGTTCACTCTTAATTGTTTCATTAATGTTTATTTTGATGCTCATCTAGGTTCCTCTCATTCACCACAAAAACTAATTTTGACAGAATAAATGCATCAGTATCATTAAGGACAAAAATATATGCAGGAAACTTGAAACTAAGTCAAATACTGACCAAACACTGTCTAAACGTAACAATGTCC TCONS_00236891 TCONS_00236892 TCONS_00236893 . 3' 384 TCONS_00236891 TCONS_00236892 TCONS_00236893 . 3' 1320 EMBV3_24517 GGACTTTAGCATGATGTTCCCGCTGCCTGTGGCCAAGTTCGGGCTCATGGGGCACCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15738 GGCCCTACTGCTCACCCCTCCGTCTGTCCTTGGTACTTTCATTCTCTCCGTTAGCAATTA Gene BVT0102_248789 + 0 NULL GK000026.2:46238139-46273594 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16354 GATACAAGAGAGCAAGAACGGTGACACAGAGGAATTCTCCCGTTATCTCCTTGGTGTGTC Gene BVV0101_075351 - 1 EMBV3_03410 GK000008.2:90305612-90443667 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01036 GACCCCAAGCCAGACTCTAAGCGGAGCCTCAGCACCAAGTACGAGACCACTATCTTCTAA Gene GeneID:532631|ANKS1A:XM_002697185:236_cdna Constitutive 1 NULL GeneID:532631 23 GENE ANKS1A NULL ankyrin repeat and sterile alpha motif domain containing 1A EMBV3_17428 CTAGAGACAAAAGAATCGCAGGCTCTGAACTAAATAGAGGTACCAGTGAGTGGACTGCAG Gene BVT0102_340782 - 1 EMBV3_13149 GK000012.2:52477381-52496958 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25218 GGGAAGGGTACTTCACCTCTGTAGTGTTCATCCCCCAAATCCAAACCCTGGTCTAATCAT Gene BVV0102_097332 + 0 NULL GK000001.2:58997513-59064066 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30962 ACGGTTGGGCTGTCAACATTCAAAGCAGCAGAGAGGGAACTTTGCACTATTGGGGTGTGA Gene GeneID:338446|PPARGC1A:NM_177945:156_cdna UTR3_Alt 2 NULL GeneID:338446 6 GENE PPARGC1A NULL peroxisome proliferator-activated receptor gamma, coactivator 1 alpha EMBV3_00748 AACCACATCTCTCAACTATCTCAAATGCTTCAGGTCTGTTATCCCTGAAAACCATTCAGG Gene GeneID:524280|NBEAL1:NM_001103173:119_cdna Constitutive 0 NULL GeneID:524280 2 GENE NBEAL1 MGC140238 neurobeachin-like 1 EMBV3_25452 CTTGAAGCCGGAGGTGACCCAGAGCTGGCGGTTCTGTCTTAACCAGAATCCCAGTCTGGA Variant GeneID:618782|TEPP:XM_002694796:626_cdna 522^623 2 EMBV3_39336 GeneID:618782 18 GENE TEPP MGC134171 testis, prostate and placenta expressed EMBV3_17416 TCGGGGCTCGAATGTGAATGGACTGAAGGGCGTCCAAACGATGGCTTTTCCTCATGAAGG Gene GeneID:613365|LOC613365:XM_002685498:5_cdna Constitutive 0 NULL GeneID:613365 2 GENE LOC613365 NULL similar to formiminotransferase cyclodeaminase EMBV3_24560 AGCCTGCTGGGATGATGGAGAGATCCCTTGTGTAAGAAGCAAAGAGACGCAAAGACCACG Gene GeneID:538236|IPO11:XM_002696305:21_cdna Constitutive 2 NULL GeneID:538236 20 GENE IPO11 NULL importin 11 EMBV3_03376 CCACAGGTCCACAGGGAAATGGTGGGGAAGGTTTTCATTCTTTTATCTCCCCTTGGGCAC Gene BVT0102_086140 + 1 EMBV3_17457 GK000011.2:63291019-63337654 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05963 CCACCAGAGTCTGTTCAACAACCTTTAACATCCCGGGGGGACCCCAGTAGAACTCACCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23061 GCCTGCCCGCCGCCATGGCCCTGCTCCGAGCTGGAAGACACTCTGTGGACAGGATTAACA Variant GeneID:522006|ACAA2:NM_001035342:119_cdna 65^477 2 EMBV3_34535 GeneID:522006 24 GENE ACAA2 MGC127380 acetyl-Coenzyme A acyltransferase 2 EMBV3_26912 TGGCAGAATGGGTGAGATGCAAGCTGTCCAGGCAAGGGCTTAGAAGCTGGAGATAGCAAT Gene BVT0102_025049 - 1 EMBV3_34812 GK000010.2:44615290-44711723 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02829 GTCTCGAGGAAAGACTCTCTGTGTTACGAGGTGCAGCATGAGTTGAAGGGCGTTTACTTG Gene GeneID:407146|ART4:XM_002687772:109_cdna Constitutive 0 NULL GeneID:407146 5 GENE ART4 NULL ADP-ribosyltransferase 4 (Dombrock blood group) EMBV3_35069 AAGTTCCAGGCGTTTCTGGACGTGAGCCACTTTACCCCAGATGAGGTGACCGTGAGGACT Gene GeneID:508671|HSPB2:NM_001098380:50_cdna Constitutive 0 NULL GeneID:508671 15 GENE HSPB2 NULL heat shock 27kDa protein 2 EMBV3_31861 TGATGAGGCGCAGGATCACCATGACCAGGAGAGAAGAAAGATTTACCAAGCAAAGTGATG Gene BVT0102_054918 + 0 NULL GK000027.2:22500794-22814892 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067162 TCONS_00157668 2 XLOC_041374 XLOC_096123 Coding TCONS_00067162 XLOC_041374 Coding Coding - 16:39943916-39949014 - TSS50572 957 2 TCONS_00067162_2 101 3 0.812831077104179 0.0139603829105 0.0231265822238732 0.0160370785701083 0.00950661774988435 0.0095676003265734 0.00327963150871884 0.00849508993240418 0.0113323920912896 0.00398740305326527 0.000721303835270564 3.27051138266586e-06 6.69907881693966e-09 0.00047434181944801 0.00171972080664353 0.000451297287767714 0 0 0 0.0143028533867659 0.0116758961534028 0.00705372556235326 0 0 0 0.0177228460293578 0.0154694842773875 0.00677748730458514 0 1.3295007815681e-05 0 0 coding 0 0 0 0 -1.07348862082189 0.00684772897949787 -0.108825342971012 0.0785230862362375 CAAAACTGAGAGTCCTGAAATCAATCAACCACTTTTATTTGAAAGCCAAAGCACCTGCCTCCTCAGCAGAAGTGCTGAGTCATCAGGAAGGAGGGGAAATCAGTCATCATGCTGCTGGGAGGAGGGGAGGACATGAATTAGTTTTTAGAATGTCAATAGGTAACAGGTTGAGATGTCTTGCTTTCTGGCCTCTGTGCTTCCTCATTGCACATGTGGCTGAAGTCCCTTCCCCTGTTCTGCATTCAAGACCCGTCTCCTCCCTGCAACATCTTGGGGATTTCTCATCAAGGTCACAGGGAACACCTGTGTCAGCTGTTACCTTCGAAGGGCACGAATCAATCTACCAACACAAGCTGAGAAAGATTGACTACAAGAGGATAAAAAGGCCCAGGAGGCAGTTGGCAGCAGTGAGCTGGTTTGGGCCTTTTCCTTCATGGAGGCTGTGGAGTAACTGATGTATGAACAGTCTGTGCAGAATAAGGGTGTTTCTTTAAAGACCATGAGCTGAGGTGTGGAAGGGGTCATATCCTAAGTTGATCTGACATCAAAGATTCACAGGTGTCAGTGAATCTCAACCCTCTGAGTGCAAAGCCATGGCTGGGAAAGGCTCCACGGGCTACAGCATTAACCTCCCCTACAGAGACCTGGCCTCCGAGGTGATGAGGCGCAGGATCACCATGACCAGGAGAGAAGAAAGATTTACCAAGCAAAGTGATGACGCTGGGGAAATACCCTCAGATGTGGAATCCAGACAAGCCCTCCCGAGTGCAGCTAGCCCCAAAGTACCCCCAGCCCCACCTCCCTCTCCAGCTGAAGACTTCCTAAGCACCTAAAACATCCGTCATTTTGAACTGGACTTTGACAGAAAACTCCAGAAAACTGTTTCTGCGAAGTCATTGGGGTTGGTTTTGAAGAATGTCTTGGCAAATCTTTATTCTTTCTTTCCCAGTTTTCTTC TCONS_00067147 TCONS_00067148 TCONS_00067149 TCONS_00067150 TCONS_00067151 TCONS_00067152 TCONS_00067156 TCONS_00067157 TCONS_00067158 TCONS_00067159 TCONS_00067160 TCONS_00067161 TCONS_00067153 s 3' 5096 TCONS_00067147 TCONS_00067148 TCONS_00067149 TCONS_00067150 TCONS_00067151 TCONS_00067152 TCONS_00067156 TCONS_00067157 TCONS_00067158 TCONS_00067159 TCONS_00067160 TCONS_00067161 TCONS_00067153 s 3' 5096 EMBV3_12160 GGCGGTTTGACTCATGGCTCTAAAAATAAGACTCGGTTTGCTCCCCTTGATTCCTCCAGC Gene GeneID:540739|GRWD1:NM_001076239:367_cdna Constitutive 0 NULL GeneID:540739 18 GENE GRWD1 MGC139107 glutamate-rich WD repeat containing 1 EMBV3_33180 TTTTCTTTCCAATTTGCCTCTTTCAGGAAGAACACCCAGCTGTCGCCAGGGGTCCCCATG Gene GeneID:407098|CD4:NM_001103225:12_cdna Constitutive 0 NULL GeneID:407098 5 GENE CD4 MGC165891 CD4 molecule EMBV3_04349 GGAAATGGAGTGGAACCAAAGCGGAAGGAGTTTTGTGCAGCTGGGCAGGCTGGAGGGCGA Variant GeneID:617377|ZNF408:XM_002693535:145_cdna 328^389 2 EMBV3_41330 GeneID:617377 15 GENE ZNF408 NULL zinc finger protein 408 EMBV3_28804 ACAGTAGCTCTCAAGCCAGGTGAAAGTCCTAATAGTGTCCAAACATGCAATGCTCCTCGG Gene BVT0102_334539 + 1 EMBV3_32299 GK000013.2:6941887-6959810 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041815 TCONS_00041822 TCONS_00041823 TCONS_00041816 1 XLOC_025547 Coding TCONS_00041823 XLOC_025547 Coding Coding SPTLC3 13:6847255-6946202 j TSS31274 5408 1 TCONS_00041823_1 241 0.114090236686391 6 0.945404564105674 0.000129252168076302 5.30787147268328e-05 6.34858349624434e-06 4.48016019711735e-06 1.05747603268344e-10 7.63742997765796e-06 2.11813928458758e-05 2.87133297446457e-12 1.34753253844934e-05 1.99365362826564e-11 6.46558087306668e-05 4.13403645292558e-05 1.05529243622154e-09 0.000151119398324285 2.8802130276936e-12 0.000724837099304056 0.000375762974306561 0.000793066903678393 4.73008040573324e-12 8.46061210700525e-06 0.000184680818726189 0.000490160328282415 0.000501191729233601 0.000127941564550301 2.30849699985765e-09 3.89548189893397e-06 3.51736508822614e-11 0.000189741456573113 0.000244931244557437 8.03654987404821e-05 XM_002692040.2 SPTLC3 PREDICTED: Bos taurus serine palmitoyltransferase, long chain base subunit 2 (SPTLC3), mRNA. 0.0 1559 100.00 0.159578402366864 NM_018327.2 SPTLC3 Homo sapiens serine palmitoyltransferase, long chain base subunit 3 (SPTLC3), mRNA. 0.0 1783 75.89 0.458764792899408 TCONS_00041823_1 sp|Q9NUV7|SPTC3_HUMAN SPTC3_HUMAN Serine palmitoyltransferase 3; 5e-153 442 86.31 0.995850622406639 1 coding 0 0 0 0 0.0604893842669278 0.560658003473358 0.0520392113982722 0.380521536339789 GAGCCTAAGGCCTTTCTCCTGTGCTTTAATGAACACTGTGATCTCTTAAGAGACTTCCCTGCATGGAAGGTTCCATCGTGCATCTGCCCGATATCGTGGCTCTGAAGAAGAAATACAAGGCTTATCTCTACATGGATGAAGCTCACAGTATTGGGTCCGTGGGCCCCACCGGCCGGGGTGTGGTGGAGTTCTTTGGACTAGACCCCAGAGATATTGATGTATATATGGGCACATTCACCAAAAGCTTTGGAGCCGCAGGAGGTTACATAGCTGGAAGGAAGGACCTTGTGGATTATTTACGGACTCACTCCCATAGCGCTGCTTATGGCACATCCATGAGCCCCCCGGTAGCAGAGCAAATCATCAGAGTAATGAAACTCATCATGGGACTAGATGGGACCACAGAAGGGCTGCAGAGAGTACAGCAACTGGCAAAAAATACAAGATACTTCAGACAGAGACTAAGCAAAATGGGATTCATTGTGTATGGCAACGAAGAGTCTCCTGTGGTCCCCCTGCTCCTTTACATGCCTGCGAAAGTAGCGGCTTTTGCAAGGCATCTACTAAACAGAAAAATCGGTGTGGTGGTCGTTGGATTTCCAGCTACGCCCCTTGCAGAAGCGCGGGCTCGGTTTTGTGTTTCAGCAGCACACACCCAGGAGATGCTGGACACGGTTTTGGAAGCCCTGGATGAGATGGGTGACCTCCTGAATCTGAAATACTCCCGGAACAGGAAGTCAGCACGCCCGGAACTCTATGATGAGATGAGCTTTGAACTTGAGGACTGAGTTTCCTGGACCTGAACGGACCCTAAAGACTTGGCCAGGAAGACCTCCTTCTTTGTCTCAAAAGGAATATAAACGGATTTCTCCTCCTTTCTAAGGACAGTTTTGGTTTCCAAAACAATTTCATTGAACCAAGGGAGAAACAATCGTTGTTGTGTTTTTAATGTCTCTATAGAGACATTAACGTTCTCCTCCCCCAAGCATCCTGCCACAAACACACACATACCACACACACATTTCTTAGAATATTTGTAATGGCAAAGAGCCTGCGTTTTAGCTGCTACTGTGCAGCCTCTTCGGTCCAGGCCCTTTTAGGAATTCCAGCCAAATGAGAGGGTTTTGATTTTTACTTCAGTAGATCTCACTACGTGTTTGCTAATTTTCTCTGCAGAGCGGGGCAAGGGAGGTGGGCAGTAGCTGGGCTCCTTCTTACCCATGAAAGAACCAGCTAGAACTCATCCGTGTCATGGGAAGTTCCAGGTGGGAGGGTAAAGAAATGTTGCCTCTACCACTTGTCACATTTGGACTTTTTCAAGGACAAGTGTCAGAAGCCATATTGAGTGTTTGAAGGGAGAGCGCAGACCTGGCCAGCAAGACCAAAGACGTCTTTACAGGAAACTTTCCTTTTCCTGTTCCTGGTTTCCTACAGTTTTATAGCTGAGCTTTTGAGGTTTGGAAAATTCAAGACTTTTGTTTCATCAGGAAGAGGGAAGAAAGCAAGCAAGCCAACTGTAGGCCTAGACTAAACTGATAAAGGTGTGACGGTGTGAGCGTCCTTGTTGCCTTGTGGACTGAATGTTTCGCATCGCTTTTACTACACTGAGAAACGAGCTGTCCTTTTCCTACTGAGTGTGGAGTCCTTTAGAGCTGACTCCTAAGACTACACTTGAGAACGGATCGGTTAAAAAGTGACATTTAAAAGTAAATGCTATTCAGCTTTTCAATTCTGACCCCTCCATTCAGACCTATTAAACAGTACTGTCCTCTGGCATAAGCACTCCACTTTGGTGCTAAGTGGGCTTTACTTGAGTTGCCTCTGTCTCTCTGTCTCTATACATCTGCCTGTCTGTCTGTCTCTCCCTCTCTAAATGTGAACACACACTTCTCTGCAAAAGTAGCCCTTTGCTAATTGAATCTAGTCGGTATGGAAAAAAAGCCAGTAGAAAACCTTATCTTTAACAAGCCCCCAGATGGTGCCCAGATTGGGAAACTCTTAAAAAGCAGTGGTGACCTTTTACCAAAGCTTCTGTAATAGTTCAAATGAGTTACAGAACATTCCACTCCATCAAATGACACTCTAAACAAATCACTTCAAGAGAGGTTTGACTTCACGTGACACAGACGGACGCGGCTCTCATGCTGCGTGCTGGAGCAGAAACCCACCCACGCCCCCCGTGTTCTGGGGGCCCGGATGCTCACAGCTTTTTAAAGGATAAAGGCGATCAGTGTGGAAAGCGTTTTATGGAGGAAACTATTACCCTAATAGGTACATCAGCTAAAAACTGGATCCCATGATAAAGTTCCCCCTGAATTTTTGTAAGGAGTCCTATAAGCAGAAGGGGACAGGAAGTGGGTCCTGAAAATGCAGTTGCTCCATCCAATGGCTGATTTTGATAACTCAATTCCAACAGAGACTAAATTTCAACTCAGTGAACCAGTGCAGCATTCCTTGTGCAAAGAAAATATATACTGTATACATATGCCAAGAAAAGGAAGGCGCAGAGGTCTTTTCTCTTGAAAATGTATGTTTAAATGAAGTTGATCTTAGTTAATTGTCCAAAATGAATCTTCATCAAGATGCCAGAGTGCTGAGTCATTGATTACATTCTCCAACATGAGATCAAGAACCTAGCTCTGTCAGACCGTCTGTGCTGAATATGAACTTATGAGAACAACTGTAATCCAAATGGAATGTTTCCTGAGCACATTAGAGGGGTTCAGGTCCCAGAGGGTTAATGATATAAGGATATATGTCTTATAGAGTGAGACTGGTTAAGAGGGTACTTGTGAGAATTTTTCATTTTTATAAGAAAAAATCTACTGCTAAGTCAATTCAATAGGTATTATTGGGCCTTTATAGCTATACCAGAGCCAAAAATGTCCCTTTGGTTGGCTCTGTTTGGAAAGATAATTTCCTAAAAGAACTGTAATGGCTTACACCCCCAACCCTCCCAACTGTGAAGAATGCGTGTGTGCATGCACACACATACAAGCACATTTGCCCCTTTCTTTACAGAGCAAGAGTTTAAAGACTCAGAGATGAGAATCTGGCTGACTAATAAATAGATGAAAGATGCTATTTCTAAAAATGACCTTCAGGGAAGCAGAAGAGGAAGGATCCAGACTGATATTTGTAAGGAGGGTGTATTTGCATAATAGCAAAATGGCATAGACACCTTCCAAATCTTACTGAATGCAGTATCCTGTTGTTGACTATCTTGCCTTTTAGCAGGCTTTGGTTTGACAGAGACTATGGGCTTCAGAATGTACTAGTAAGCTTATTAAAATAAAGATCCCTGGGCCCCAAACCAGACTTCCACTGAATCCAAATAGCTCCAGTGCCCAGGAATCTTGCTTTTCAGCCTGTCTTCCCAAGGGGATTGTCAACCAGGTCATAATTTGAGAACCAGGGCTTCCCTGGTGGCTCAGCTGATAAAGAATCCACCTGCAATGTGGGAGACCTGGGTTCAATCCCTGGGTTGGGAAGATCCCCTGGAGAAGAGAAAGGCTACCCACTCCAGTATTCTGGCCAGGAGAATTCCATTGACTATATAGTCCATGGGGTCACAAAGAGTTGGACACGACTGAGCGACTTTCACTTTCATTTGGACTGGTAACTCTAGTAACTTTCCCAGGAACTTTGTTCTGATTCTCTGTTGGTGATTAAGAGTGTTTATATTGTTAAAGTAAATTAATTATTCTAAACTTTTCACCCCAATGCAACATTTTGTTCCCATTTCAAGGTACCTTCTCTTTCCCCAAAAATGAACCCGGTGTTGAAGAATAACCTGCCATTCATTTGAACAGAAGTATCTCTTCTCTAGCTCTCCTTCATCTCCTTTGTGTCATTTCTTACAAGATGTTCCTTTTTCTTTTCATGACTTTGTTCCACCAATTGTGGTATCTTGTTTCCTTTTTTTCTTCCCACCCCCTGAAAAAAATCTTCGACTTCTGATTATTTATTTATTCCAACAGTAGCTCTCAAGCCAGGTGAAAGTCTTAATAGTGTCCAAACATGCAATGCTCCTCGGTGTTTGTCTTCAGAGATAACAAATATTATAAATGAGTTACTCTGACCGAGGAAACCTTGGCTCTCTTAAATATAGGATTTGATTTATGGCAACAATAACAATTGTAATTTGAACTTATCATACTTCCTTGGCAGTTTTTTCCCAGTTTCACTAAGAACAATATATTCGAAGTCTTTTTTCTCAGGATGCTATATGGAGCTGTATAATATTTAAGAAATTAAAAGGAGACTGTATTTTAAATGTTTCTAGGTATTTATCGTGGGACATTGTCTTAGGGTGTTGTGGTGTGGTGTTTTGTATGTGTGTATGTATGTGTGTGTTTCACTGAAACATTTGAGGTGACCAACTTCATTATATTCTCCCTGTGATACATTAATTTCTTTAATAAACCAATCACCCAAATTGGCAATATAAAAATGAGTTGATGTTTTTGTGTTGACTTAGTTTGGGTGACCCACTCTAGTGTTCTTGCCTGGAGAATCCCAGGGACAGAGGAGCCTAGTAGGCTGCCATCTATGGGGTCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCCCTAAAAAAAAAAAAGACTAAGATTTGCTTTTAAGAATTTCATTGAGAAAAAATGGCCCAGGGTGGCGAGCCATGACTTGCACTATGTCACCAGAACCAATGGTGCCCATCTCTTCCCAACTCTGTTTTCAGTGACATCACCTTTATAGCTGGAAATTGGCCTTGTTGGGAGTATTTACATCACAGAAACTGGCAAACACTACAGATTCGTGGTCTGGAGAGCTGGCTGTTAAATGTTGATCAGGCACACCACTGAGACTGCATACAGTGTTACAATATCTAGGTTGGAGGGAGGGAACAGGCTTGGAAACAGAAGTTGCAGTGTGATGTCATCATAACAAAGGCTTCAGTAAGCCCCAGAGAAGCTATACAACTGAGATGGGCCTTTAGAAGTAGCTCAAAAGAAGGCGAGGGTGCCAGGTCTGTCCCCCTACATACTAGTTAAAGGATGCAGGCTACCAGGGCATCCCTGGGGGAGAGTGGTAACTTAGACAAGACAATTCCTTTCAGTCAAGGGAAATTCTTGGGGAAGGACTCAGCTTTGAGCTGATAGCCATCCATCCACTTAAAACTTTTACTTCTAAAATGCATAATTAAATACTACTGAGTCTCTGAAGAGAAAAATAAATATTGTATATATTTTTAATTTATGTATGTAGTTTATTTTGTTATACATACCTATATATAATAAATATGTTTATTTTTAAAAACTATATTTATTTATGTTATTCTCTTTAATGACTATTACAAAGAAATTAATGAATACAGTTTAACATTACTTTAAAGATGTTGACTTCCTGGATTGTTTG EMBV3_38249 CCCCCAAAGTTCCTCTGAAGTACCTAGACAATACTGTTTGACGCACATTTCCTGAGTTGC Gene BVT0102_164325 + 1 EMBV3_18345 GK000016.2:65369038-65379389 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069951 TCONS_00069950 1 XLOC_042100 NonCoding TCONS_00069951 XLOC_042100 NonCoding NonCoding - 16:65377133-65377834 - TSS52053 701 1 TCONS_00069951_1 41 0.59058487874465 1 0 0 0 0 0 0 0 0 0 0 9.95348393906441e-10 0 7.82983701144276e-09 9.75205771516151e-05 0.000241574139323925 6.99882894348176e-06 0 0 0 0 3.07761526911317e-05 0 0.000137615547947093 0 2.39147421955852e-05 9.88333350591145e-06 0 0 0 6.92494870346152e-06 0.000102919833960578 XR_237875.1 LOC101905857 PREDICTED: Bos taurus uncharacterized LOC101905857 (LOC101905857), 0.0 673 100.00 0.530670470756063 0 noncoding GTATTAGTCACTTAAATTTTTGAACTCTAGTGCTTCCCACAGAGTCAGTAGTACAGAATATTTCAAGTTGGGATTGTTCCAGAGAACCCAGACTAATCAATTATCTGACCCCATCATACCAACCATCCTTATTTTTCACCTCTTTCACTAAGTTTTTTTCCTAACTCTTCTAGCTCACTCTGGTTAATCCCTTGTTTTAGTATTTCTCCTATGATTAGAATAACACAGCATTTACTCAATCTTATTTTCCTCGTGGGTTTGCTGTCTTCAACTAAAAACAAAACCATTCAGGGAAACACCTTAATCTTTTGTTTCTTTGTCTCTTTCAGGGTGTAACCGAGCAGGACGCCATGGGAGCTTCTGGGGACGGGCCTTCCCCCAAATGTTCCCCCAAAGCTCCTCTGAAGTACCTAGACAATACTGTTTGATGCACATTTCCTGAGTTGCTTTGCAGACGTAAAAAACCTCCTCTCTCCAGCAAATGGAAGATATTATGACCATGAGTCAATTGGAGCCTAAGGACCAATTTTTTTAAACCCTGTGACACCACCCTCACCATCAGCCAATCAGAGAATTGTGACAAGCTGATCGCAGACTGCCCCCTCCCATCTGGTTTGTAAAAGAGCTTTGCAAGAGCTCAGGGCTTTTAAGGCATAAGCTTCCTGTCTCCTTGAATGACCTTGCAGTAAACTTTTCTCTGC TCONS_00068000 TCONS_00067999 r 5' 1556 TCONS_00068000 TCONS_00067999 r 5' 1556 EMBV3_26389 AGTGGCAGCACTGCTAACCATTCCAGAAGCAGAGAAGAGTCCGCTGATGAGTGAATTCCA Gene GeneID:538086|CAND1:NM_001101173:40_cdna Constitutive 0 NULL GeneID:538086 5 GENE CAND1 NULL cullin-associated and neddylation-dissociated 1 EMBV3_36982 TCCACAAAGGAGCTCCAGGATAACATAAAGGGGATAACATTAACAACTCAGCAAGTAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08324 TCCCCAGATACGCTCTGAGGGGTCAACTAGATTATCTGAGGTATAAATACGAGCATCCAG Gene BVV0102_124538 + 0 NULL GK000025.2:13283318-13339482 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42325 AGATGCTCAGGGATCTCAAGACGGAGCATGTTGGAGAAGCAAGTGGTCATCACAAGGCCC Gene GeneID:100296203|LOC100296203:XM_002696773:460_cdna Constitutive 0 NULL GeneID:100296203 21 GENE LOC100296203 NULL hypothetical protein LOC100296203 EMBV3_21405 TGAGCTCCTACGGTGGCTGGAAGGACAACATCTCCTCCATGGGCTGATGGCCAGTGGGGA Gene GeneID:281870|INSL3:NM_174365:5_cdna Constitutive 0 NULL GeneID:281870 7 GENE INSL3 RLF insulin-like 3 (Leydig cell) EMBV3_20038 CAAGCAGCTGCTGTGTGTATGGGATTAGAGCCACTACGTAAAATAGTCTCTTTAACAGAT Gene GeneID:100138178|UBE2Z:XM_002695907:252_cdna Constitutive 4 NULL GeneID:100138178 19 GENE UBE2Z NULL ubiquitin-conjugating enzyme E2Z EMBV3_32544 GACCTGGGCCTTGTGAAGTTTCCTGAAGATAATTTTAATGCCTAGTGATGCAGACAATGG Gene BVV0102_048460 + 0 NULL GK000024.2:49942828-49955436 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140506 TCONS_00140510 TCONS_00140505 TCONS_00140507 TCONS_00140508 TCONS_00140504 TCONS_00140509 TCONS_00140503 TCONS_00140502 1 XLOC_085144 Coding TCONS_00140510 XLOC_085144 Coding Coding MYO5B 24:49955099-50294051 j TSS104857 8922 1 TCONS_00140510_18 1827 0.149181797803183 39 0.973792672097147 0.00318835790961729 0.00276047968136601 0.0018815812375918 0.00239689523981837 0.00178704218207924 0.000750408294006477 0.00113638238891047 0.00180727692194725 0.00163552648447814 5.30198651334479e-05 7.61541699971096e-05 6.16091007972197e-06 4.6832814679853e-05 0.000117124917262727 6.17831870567638e-05 3.60876957136997e-130 3.36522381014497e-93 1.10444097003715e-84 0.00298921754486418 0.0041499284264661 0.000943504098006463 2.05925330122069e-53 2.4617798607403e-21 3.32416967138878e-80 0.00358247607856463 0.00282332222440119 0.00198930512116799 1.16329622395254e-61 8.53894238224722e-26 5.86739624157492e-06 XM_591875.6 MYO5B PREDICTED: Bos taurus myosin VB (MYO5B), mRNA. 0.0 7061 100.00 0.438690876485093 XM_005258276.1 MYO5B PREDICTED: Homo sapiens myosin VB (MYO5B), transcript variant X1, 0.0 7645 87.72 0.687401927818875 TCONS_00140510_18 sp|Q9ULV0|MYO5B_HUMAN MYO5B_HUMAN Unconventional myosin-Vb; 0.0 3435 90.01 0.991242474001095 0 coding 1 0 1 1 -0.19098472845716 0.252546274120992 -0.0778651677790428 0.225343462098688 GAGTGTTGTTGGTCTGAGGTTACCCTCAGTTTCTTGTCACATGAATCTCTCCATAGGGCAGCTCACAATAGGTTAGCTTGCTTCATGGGAGCAAACATATGAAAAATGTCAGAGAAAAGTCCAGCAAGACAAAGTCACAGTCTTATAACCTAACCATGGAAGTGATACCCCATCACCTTTCCTAGACTCAAATCACTAGGTCCAGCACGATTCACCTACTATTTCTTGAGTTCTATTTTGAGCAAGGCAATGGGTCTGTGTTGTTCCTGCCTTAGAGCCTAGTGTTGAGAAGTCAGTGATATTAGTGGGCTTCCCAGGTGGCACTAGTGGTAAAGAACCTGCCTGCCAATGTAGGAGATGTAAGAGGTGCAGGTCACATCGCTGGGTTGGGAAGATACCATGGAGGAGGGCATGGAAACCCATTCCAGTATTTTTGCCTGGAGAATCCCATAGACAGAGGAAACTGGCAGGCTGCAGTCCATAGGGTTGGACATGACTGAAGTGACTTAGCACACACACACAGGGATATTAGTACACACATATTACAGGGTGCAGTGCAGATGAATGCTTTGGAAGTTCAAAGTTCTTCCTCATTTGTATGTGATGGAAAGCCCCATCTGTCAGGAAGGAGAGCAAGTCACTTACAATGAATGTCTTCTCTTTACTTTGAGAAACCATGGAGCACAGAGCAGTGCTTCTTAAAAGTATGAGCCCTATACCATCTAGGGTACTTAATAAGCATGCACACACATGGACCAACCAGATTAGTATCCCCTGGCATCCCCTTCATCCTGATTCCCACTAAGGTTCAGGAACTGCTGGCAGGTGCTTAGGCTCTAGAGTGTGATAGAGTTTGAGTTCAGTACTGGCTTTCTGACCTAGAACATCTCCCGAGCACCCTCAGCCTTACTTTGCTCACTTATGAAACAGAGTTAATATCTGAACCTCCTCTAAAATGTTGCTTTGAGGCTCAGACAAGATTGCAGAAGTAAAGCACTTGGCAAATGCTTTTTCCTGGCACAAAGTAAGTTTTCAAATGTTTTTATTATTATTCCAAGGAGGGAAAGCCTATATCTGATTGTGAGATTCAGTTCAGTTCAGTTCAGTCTCTCAGTTGTGTCCGACTCTTTGTGACCCCATGAATCGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCTGGAGTTCACTCAGATTCATGTCCATCAAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGGGTCTTTTCCAACGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCGCAGTTCAAAAGCATTAATTCTTCATTAGACGTCCACAAAGTTCTGGCCAAGAGTAGGAGCCTCCTCGGGGACGTGATTCAGCTCAGTCAGCATGAATTCACCTTTTAATTCATGCCAGGTATGATGGAAGCCAGAAAGTTGGACCTGGGTTGGGGATGGGGACAAAGGATGGTCACGTGAGTCTCAGGTTGGTCCAAGGGCTTAGAGGGATTGCTAGCATTGCCTACCTGGCAGGTGGAGAAGTGGGTCTAGAGGTTAGAGCTGGACTGGAGAGTTAACATTGCGGTAAGAGGAGAGATGGGGGCGTGGCTGAGAAGAAAGCTGAGATCTGGGAAATGGGCCACAGTTTTATTCAGGAAGAGAAAGAAGAAGGTGTGGTTAGCAAAGCCGGGAAAACAAGAGGAGAAAAATGATAGAGGCCAAGGGGGAACAACAACATAGGGAGAGTCAGTTCCCACCCCAAGCTTCAGACAGAGACGGCAGTTTCAGTAGGATGGGGTTGAGAGGGAACTGCTTAGGAAGGAATGAAAGCAGAGACTCTTAACCTTGACTGTCATTAGAACCACCTGAAAATGCTTAAAAATCTCTCTGCTCAGGCAGCACCCCAGACAAGTCAAATCAGAATTTCTGGGAGTGGGATCCAGGCATTTGTCTTTGTAAAAGTGACTCCAGTGTGCAGAAAGTGTTGAGAACCAGTGAATTACAGAGGGACTAGACTAGGGCTGAGTCTTAGCAAGGAGACTTTCTTATTTGAGAGGGAAGGACCTCGGTGAGATGTGAAGACACAGGTGTTGAGCCCCACTCCCAGCCTTTCTGATTGGTCCTCAATGAGGCCCCATATTTTGTATTTCTAAAAATTTCCAGGTGATGCTAATGGCCCTGGGGCCCACACTTCAAGAACTACCAGAATACAGGGAAGGACACTCTGCAGACAGGTTTTTGAGGGAGAGAGACAGGACAGGAGCTCCCTTTCAGATCCAAGAAGAGTCGTCCAAGCTTAGGTCATTGGCACTGGTCAACCCTGGAAGTATGATTCTTTAGAATTAGGGAGGAACTTCAGATACTGGGATCCCACCCTTCGCCAAATGGTGTTCCTCACGGTGGAACTGTTAAAGCTCCCCGGGTAATTCTCATTGAGGAGGCATGGTTGAGAAGGGCGGCAGGTGGACTAAATGCGGATCCTGCTTTCCAAGCGAGAAGGTCTTAAACGAGATGGGTCTAAGAATCTCCCGCCAGGCAGTGGGGCTCCGGAAAAGCCGCAGACATGGATGCTCTGGCTGAGAACTGCTTTCAGAAGTCATCCCTCATTCAGTACACAAGGGTCTGGATCCCTGACCCGGATGAGGTGTGGCGCTCCGCTGAATTAACCAAGGACTACAAGGAGGGGGACAAGAGCCTCCAGCTCCGACTGGAAGATGAAACCATTCAGGAGTACCCCATCGATGTCCAAAACAACCAACTTCCCTTCCTGCGGAATCCAGATATCCTGGTGGGAGAAAATGACCTAACTGCCCTTAGCTATCTCCATGAGCCTGCAGTTTTGCATAATTTAAAGGTCCGCTTCCTGGAGTCCAACCATATCTACACTTACTGTGGGATTGTGCTTGTTGCCATTAATCCTTATGATCAGTTGCCAATCTACGGTCAAGATGTCATCTATGCCTACAGTGGCCAGAACATGGGGGATATGGACCCCCACATCTTTGCTGTGGCAGAGGAAGCCTACAAGCAGATGGCCAGAGATGAGAAGAACCAGTCCATCATAGTCAGTGGGGAGTCTGGAGCTGGCAAGACGGTGTCGGCCAAGTATGCCATGCGCTACTTCACCACGGTCAGTGGCTCAGCCAGTGACACCAACATCGAAGAGAAAGTCCTGGCGTCCAGTCCCATCATGGAGGCCATCGGGAATGCTAAAACCACCCGCAACGACAACAGCAGCCGTTTCGGGAAGTACATTCAGATCGGCTTTGACAAGAGGTACCGCATCATCGGGGCCAACATGAGGACCTACCTGCTGGAGAAGTCCAGGGTGGTCTTTCAGGCAGACGACGAGAGGAATTACCACATCTTTTACCAGCTCTGTGCGGCTGCCAGTCTTCCGGAATTTAAGGAGCTGGCACTAACCTGTGCTGAGGACTTCTTCTACACGTCACAGGGAGGAAACACAGTCATCGAGGGTGTGGATGATGCTGAGGACTTTGAGAAGACTCGACAAGCCTTCACGCTCGTTGGAGTGAGAGAGTCCCATCAGATAAGCATTTTTAAGATAATTGCTTCCATCCTGCACCTCGGAAATGTGGAGATTCAAGCCGAGCGCGATGGTGAATCCTGTAGAGTATCACCTGAGGATGAACACCTAAGCGACTTCTGCCGCCTGCTGGGCGTGGAGCTCAGTCAGATGGAGCACTGGCTGTGCCATCGCAAGCTGGTCACCACCTCGGAGACCTACGTCAAGACCATGTCCCTGCAGCAGGTGGTCAACGCGCGCGACGCCCTGGCCAAGCACATCTATGCCCAGCTGTTCCACTGGATCGTGGAGCACGTCAACAAGGCCCTGCACACCTCCCTCAAGCAGCACTCCTTCATTGGAGTCCTGGACATCTACGGGTTTGAGACGTTTGAGGTGAACAGCTTCGAGCAGTTCTGTATCAACTACGCCAATGAGAAGCTCCAGCAGCAGTTCAACTCACACGTATTCAAGCTGGAGCAGGAGGAGTACATGAAGGAGCAGATCCCGTGGACCCTGATTGATTTCTATGATAACCAGCCTTGTATCGACCTCATAGAAGCTAAGCTGGGCATCTTGGACCTGTTGGATGAAGAATGTAAGGTCCCCAAAGGAACCGACCAGAACTGGACTCAGAAGCTCTATGACAGGCACTCTGGCAGCCAACACTTCCAGAAACCCCGCATGTCCAACAAGGCCTTCATTGTCATCCACTTTGCAGATAAGGTGGAGTACCTTTCAGATGGTTTTCTGGAGAAAAACAGAGATACCGTGTACGAAGAACAGATCAACATCCTGAAGGCCAGCAAGTTCCCGCTGGTGGCTGACTTGTTCCATGATGGCAAAGACTCTGCTCCCACCGCCACCGCTTCTTCCAAGATCAACATTCGCTCCTCCAGACCCCCTGTGAAAGCCTCCAACAAGGAGCACAAGAAAACCGTGGGTTACCAGTTCCGCTCCTCCCTGCATCTGCTCATGGAGACACTGAACGCCACGACACCGCACTATGTCCGCTGCATCAAGCCCAACGACGAGAAGCTGCCCTTCCATTTTAACCCAAAGAGAGCAGTGCAGCAGCTCCGAGCCTGCGGCGTATTGGAGACCATCCGGATCAGCGCGGCTGGCTACCCATCCAGGTGGTCCTACCATGACTTCTTCAACCGGTATCGGGTGCTGGTCAAGAAGAGAGACCTTGCCAACTCAGACAAAAAGGCCATCTGCAGGTCTGTGCTGGAGAGCCTCATCAAGGATCCTGACAAGTTCCAGTTTGGCCGCACCAAGATCTTCTTCCGGGCCGGCCAGGTGGCCTACCTGGAGAAGCTTCGGGCTGACAAGTTCCGGGCGGCCACCATCATGATCCAGAAAGCCGTGCGGGGCTGGCTGCAGAAGGTGAAGTACCGCAGGTTGAAGGGAGCCACCTTAATTCTGCAGAGGTACTGCCGAGGATACCTGGCCCGCAGACTGGCCAAGCATCTGCGGAGGACCCGGGCGGCCGTGGTGCTCCAGAAGCAATACCGCATGCAGAGGGCCCGCCGGGCCTACCAGAGGGTCCGCAGGGCCGCCGTCGTCATCCAGGCCTTTGCTCGGGGCATGTTTGTGCGGAGAATCTACCACCAGGTCCTCAGGGAGCACAAGGCCACCATCATCCAGAAGCACGTGCGGGGCTGGATGGCTCGCAGGCGCTTCCAGCGGCTGCGGGGTGCGGCCGTTGTCATCCAGTGCGGCTTCCGGAGGCTCAAGGCCAAGCAGGCGCTGAAGGCCCTCAGGATCGAGGCGCGCTCCGCGGAGCACCTGAAGCGCCTCAACGTGGGCATGGAGAACAAGATTGTCCAGCTGCAGCGGAAGATCGATGACCAGAACAAAGAGCTCAAGACGCTGTCGGAGCAGCTGTCAGCAATCACCTCCACACACACCATGGAAGTGGAGAAGCTGAAGAAGGAGGTGGCCTGCTACCAGCAGAGCCAGGGTGAGGACAGAGGCCCGCAGTTGCAGGAGGAGGTGGAGAGCCTGCGGACCGAGCTGCAGAGGGCCCACTCAGAGCGCAAGGTCCTGGAGGACACCCACACCCGGGAGAAGGATGAGCTGAGGAAGCGAGTTGCAGACCTGGAACAAGAAAATGCACTCTTGAAAAATGAGAAGGAGCAGCTTAACAACCAGATCCTGTGCCAGTCTAAAGATGAGTTTGCCCAGAACTCTGTCAAGGAAAACCTCATGATGAAGAAGGAGCTGGAGGAGGAGCGCTCCCGTTATCAGAACCTCGTGAAGGAGTATTCCCGGCTGGAGCAGAGATACGACAACCTTCGGGATGAGATGACCATCCTAAAGCAAACCCCAGGCCACCGGAGGAACCCATCAAACCAAAGCAGCTTAGAATCTGACTCCAATTACCCGTCCATCTCCACGTCTGAGGTGGGAGACACAGAGGACACCCTCCAGCAGGTGGAGGAAATTGGCCTGGAGAAGGCAGCCATGGACATGACCGTCTTCCTGAAGCTGCAGAAGAGGGTGCGGGAGCTGGAGCAGGAGAGGAAGAAGCTGCAGGTGCAGCTGGAGAAGAAAGAACAGCAGGACGGCAAGAGAGTCCCGGCGGACCAACCAAGCAATGACTCAGATTTGGACCAGGATGCAGATCTAGCCTACAACAGTCTGAAGAGGCAGGAGCTGGAGTCGGAGAACAAGAAGCTGAAGAATGAGCTGAACGAGCTGAGGAAAGCCGTGGCCGACCAAGCCTCGGAGCACAGCCCGGCTGCCGCCGGCACCCCCGACAGCTACAGCCTCCTGCTGAACCAGCTCCGGGTGGCCAACGAGGAGCTGGAGGTGCGCAAGGAGGAAGTTCTCATCCTGCGGACCCAGATCGTGAGCGCCGACCAGCGCCGCCTGGCGGGCAAGGGCTCGGAGCCAAACATCAATGCCCGAACCAGTTGGCCGAACAGCGAGAAGCACGTGGATCAGGAAGATGCCATCGAGGCCTATCACGGGGTCTGCCAGACTAACAGGTTGCTGGAGGCACAGCTGCAGGCCCAGAGCCGCGAGCACGAGGAGGAGGTGGACAATCTCAAGGCCCAGCTGGAGGCCCTGAAGGAGGAGATGGACAGACAGCAGCAGACCTTCTGCCAGACCCTGCTGCTCTCCCCAGAGGCCCAGGTGGAGTTCGGCATCCAGCAGGAGATGTCTCGGCTCACCAACGAGAACCTGGACCTTAAAGAGTTAGTTGAGAAGCTGGAGAAGAACGAGAGGAAGCTCAAAAAGCAACTGAAGATTTACATGAAGAAGGTCCAGGACCTGGAAGCTGCCCAAGCCTTGGCCCAGAGCGAGAGGAAGCGGCACGAGCTCAACAGGCAGGTCACCGTGCAGCGGAAGGAGAAGGACTTCCAAGGCATGCTGGAGTACCACAAGGAGGACGAGGCCCTGCTCATTCGGAATCTGGTGACAGAGTTGAAACCGCAGGTGCTGGCGGGCGCGGTGCCCTGCCTCCCAGCCTACATCCTCTACATGTGCCTCCGGCACGCGGACTACGTGAACGACGACCTCAAGGTGCACTCCCTGCTGACCTCCACCATCAACGGCATCAAGAAGGTCCTCAAGAAGCACAATGAGGACTTTGAGATGACGTCGTTCTGGTTGTCCAACACCTGCCGCCTCCTGCACTGCTTGAAGCAGTACAGCGGGGACGAGGGCTTCATGACTCAGAACACTGCAAAGCAGAATGAGCACTGTCTTAAGAACTTTGACCTCACTGAATACCGCCAGGTGCTGAGCGATCTTTCCATTCAGATCTACCAGCAGCTCATTAAAATCGCCGAGGGCCTCTTGCAGCCTATGATAGTGTCGGCCATGTTGGAGAACGAGAGCATTCAGGGTCTGTCTGGGGTGAAGCCCACGGGCTACCGGAAGCGCACCTCCAGCATGCCGGAAGGAGACAACTCGTACTGCCTGGAAGCCATCATCCGCCAGATGAACTCCTTCCACACGGTTATGTGCGACCAGGGCCTGGACCCCGAGATCATCCTGCAGGTGTTCAGACAGCTCTTCTACATGATCAACGCGGTGACGCTCAACAACCTGCTTCTGCGGAAGGACGTCTGCTCCTGGAGCACAGGCATGCAGCTCAGGTACAACATTAGTCAGCTGGAGGAATGGCTTCGGGGAAGAAACCTGCACCAGAGCGGAGCTGTTGAGACCATGGAACCCCTGATTCAGGCTGCCCAGCTCCTGCAGTTAAAGAAGAAAAGCCCCGAGGATGCTGAGGCCATCTGCTCCCTGTGCACCGCCCTCAGCACCCAGCAGATTGTCAAAATTTTGAACCTTTATACCCCTCTGAATGAATTTGAAGAACGGGTGACAGTGGCTTTTATACGAACAATCCAGGCACAACTGCAAGATCGGAATGACCCTCAGCAGCTGCTATTAGACTTCAAGCACATGTTTCCTGTTTTGTTCCCGTTTAATCCATCTTCTCTGACCATGGACTCAATCCACATCCCAGCATGTCTCAATCTGGAGTTCCTCAACGAAGTCTGAAAATGCACATGCCAGAGCTTGATTGCCAGTGAGAGCACGAAGGAAGTACATAGGACAGTGAAGTGAATTTAAGAATCTGTTAAAATCTGTAAAAGGAGATCAGATCAAAGTTTGAGAGCCTGTGCAGAGTGAACTATACAGAATAAGACACATCTGTCATTATATTTTGTACCTACTGCTCAGAATAAAAACACTTGAAATATGGAAGATTTTTTTAAAGTATGATTTCGGTCTAAACAAATTCATATCATAATCCATAGCCACCAAGCAGTCCCCATGGCCATATAAAAGGTGCCAGTCTATACAATAGAAACTGCCTAGTTTTGATCTTTGGACATAATGAGAATTTCCAAAGTAAGATGACATTAAAAATAATGTAAGTCACATAAACTGCCTTCAGAGGGCTTTTAACAAATCATGGTATTGTTAAGCATGATACTGTCAAATAGCAAGTGACATTTCCCCACATCAGCACACTACAGGTGTGGATGGGTTTATGAGGAGATGTTTTGAGGACAAACATATAGACCTGGGCCTTGTGAAGTTTCCTGAAGATAATTTTAATGCCTAGTGATGCAGACAATGGTGTAATTGACCTCCAGACTAAACAGTTTGATTATTGGTTTCTGAAGTAAAAGTAGAAGACTTGGTCCCTAATATACTCAGACCTATTTGTGTGGTCATGAATTTATGGAGTAATTGTGCTAAAAATGCTACAGTTCCA EMBV3_06695 TCATCCCTAAGTCTTACAGTTTTACCTTTGGACTTCACCGCTTGCCCTTGCAGTGTAGCC Gene GeneID:513622|MRPL51:NM_001101088:26_cdna Constitutive 1 NULL GeneID:513622 5 GENE MRPL51 L51mt MRP-L51 mitochondrial ribosomal protein L51 EMBV3_21298 ATGACTGAGCTGATTTTGCTTTTTTGGAATTGGATGAAGTTGACAGTAGGCATTCACCGG Gene GeneID:281566|UGT8:NM_001083635:14_cdna Constitutive 0 NULL GeneID:281566 6 GENE UGT8 NULL UDP glycosyltransferase 8 EMBV3_03016 GTATCCCATTGGGTAGAAACACAGTATGATGAGAGAGCTGGGCAGAAGCAAGGACTCCTC Gene GeneID:508373|RAB2A:NM_001075354:18_cdna UTR3_Alt 1 NULL GeneID:508373 14 GENE RAB2A RAB2 RAB2A, member RAS oncogene family EMBV3_37647 CCTAGCCAGGCCAACATAAAGGGACACAGCCCAAACACAATCACACAAGCTCAGCAATTG Gene BVV0102_411214 + 0 NULL GK000001.2:33854671-34585181 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37130 GGGCACCTCAGCTGTGTATATGATGTGGGGGATTCAAATGCTACCTGACTCACATCTGTG Gene GeneID:614045|C1QL3:XM_002692101:314_cdna Constitutive 2 NULL GeneID:614045 13 GENE C1QL3 NULL complement component 1, q subcomponent-like 3 EMBV3_22386 CTCAGACCTGCCGTTTCCTTCTCACTACCAGCGCTTCAGCATTTCCACCTTCAGCTTTGT Gene GeneID:280965|ZP4:NM_173975:66_cdna Constitutive 0 NULL GeneID:280965 28 GENE ZP4 NULL zona pellucida glycoprotein 4 EMBV3_39509 TATCAGGACAAGGGCCATTTCACCTAACTCGGACCACAGACAAGCAGGTCTTCAGAGTGA Gene GeneID:767930|CENPO:NM_001077003:249_cdna Constitutive 2 NULL GeneID:767930 11 GENE CENPO MGC128667 centromere protein O EMBV3_18706 ACGTACTGTTTTTCTGTGGTCTGCTTGTGCCCCCATTTGGCATTCTCCTGGGGCTTCAGA Gene GeneID:100139154|XPO5:XM_002697301:141_cdna Constitutive 0 NULL GeneID:100139154 23 GENE XPO5 NULL exportin 5 EMBV3_33097 GCACACGTGTCGAGCGCCTTGAGGGTTTTTTAGCACACTAGAACACTCTTGGCTTTATGG Gene GeneID:518159|FITM2:NM_001103095:1114_cdna Constitutive 1 NULL GeneID:518159 13 GENE FITM2 FIT2 MGC155065 fat storage-inducing transmembrane protein 2 EMBV3_26961 AAATGTCTGAGATGGAATGAGCTGGCCATGAGTTTGGCTCCCCTCTCTTGACAGTGAGTC Gene BVV0102_036164 + 1 EMBV3_36801 GK000007.2:52513061-52669810 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12565 TCTCAACCCTTCAAATCTCAAGAAGCCCGTCCAGGAGGCAGTCAAGGAAATGACAGGCAC Gene GeneID:523510|ADH6:NM_001075843:14_cdna Constitutive 0 NULL GeneID:523510 6 GENE ADH6 MGC143197 alcohol dehydrogenase 6 (class V) EMBV3_21044 AGCTTGTGTGAGCTCCTAATCACTGATTAGGGATCTGCATGGCCTACTATGAGAGCCACT Variant GeneID:512087|LYZL1:NM_001077910:31_cdna 61^223 1 EMBV3_27599 GeneID:512087 13 GENE LYZL1 LYZL2 MGC148341 lysozyme-like 1 EMBV3_02567 CGGGGCTTCTGCAAGCAACAGATTTAGCAGTGACAGCCAGCTACATGACCGATGGACTTT Gene GeneID:614061|RNF115:NM_001076308:1_cdna Constitutive 1 NULL GeneID:614061 3 GENE RNF115 MGC140179 ZNF364 ring finger protein 115 EMBV3_35084 GCGGTCAGAAGATCCTCCACAAGAAAGGCAAAGTATATTGGTACAAGGACCAGGAACCCC Gene GeneID:527590|MMP23B:NM_001038556:157_cdna Constitutive 0 NULL GeneID:527590 16 GENE MMP23B MGC134522 MMP23 matrix metallopeptidase 23B EMBV3_18789 CTCAGCTGCCGCTGACCACGACCCAGCAAGAGCCCAACCCGGGGATGGCCTCGAGTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15603 AGTGTTGATCGTCATCGGCGATCACAGGATAGGGATTTTTGCTAACCGACCCATGCAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10030 TGGCCATCAAGTCTACAATGTCTGGTCAAGCCAACCAAAACTTCTCCACCCTATGCAAAG Gene GeneID:100300563|LOC100300563:XM_002699576:44_cdna Constitutive 0 NULL GeneID:100300563 X GENE LOC100300563 NULL hypothetical protein LOC100300563 EMBV3_39863 CTAGGCCACCAGCCCGCGGGTTCAGGGAAGGATGTTCTGTTGCTCAGTCAGTTCATCCGG Variant GeneID:614102|MRPS18A:NM_001101229:350_cdna 123^262 2 EMBV3_08099 GeneID:614102 23 GENE MRPS18A MRP-S18-3 mitochondrial ribosomal protein S18A EMBV3_40999 GGTACCATTGATTTCAGGGTGACCCCAGTGCTTCCTACATGGCAGACTCTTAGTGGATTC Gene BVT0102_335048 + 0 NULL GK000006.2:92104354-92119116 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42598 CCACTGGACCACCAGGAAAGTCCCTAAACCCTTTTCTTCTTTCAGTTGCACTGGGTCTTC Gene BVV0102_390988 + 0 NULL GK000018.2:49170333-49185712 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090625 1 XLOC_055405 NonCoding TCONS_00090625 XLOC_055405 NonCoding NonCoding - 18:49182345-49182779 - TSS67971 434 1 TCONS_00090625_1 78 0.850230414746544 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.16773838229627e-05 0 0 0 0.00011562650872593 3.30458604044257e-05 0 1.16579126048955e-06 2.13728879914192e-06 4.22767336446864e-05 0.00297437054057692 0 0 0 0 3.49553998609703e-05 0 XM_001789477.2 ERN1 PREDICTED: Bos taurus endoplasmic reticulum to nucleus signaling 1 (ERN1), mRNA. 2e-38 163 75.00 0.592165898617512 0 noncoding 0 0 0 0 -0.621560616450237 0.0840732713135539 -0.0411565892186442 0.530089677498536 TTAATTTTTTAAAATTTTATTATTATTATTTTTGGCTGAATGCAGGATCTTAGTTCCCCAACCAGGCATCGAACCTTTGCCCCTGCATTGCAGCATGAAGCTTTAACCACTGGACCACCAGGAAAGTCCCTAAACCCTTTTCTTCTTTCAGTTGCACTGGGTCTTCGTTGCTGTGCTCAGGCTTTCTCTAGCTGTGGCAAGCAGGGGCAACTCTTTGTTGCGGTGCTCAGGCTTTTCATCGCAGTGGCTTCTCTTGTTGCAGAGCAGGATCTCTAGAGCACAGACAGCATTTGCGATGCTTAGGCTTAGTTGCTCCCAGACATGTGGGATCTTCTCAGACCACAGACCAGGGATGGAACCCATGTCCTCTGCATTGGCAGGCGGATTCCTAACCATTGGACCACCAGGGAAGTCGCCCCCCTCCCCCAACACAC TCONS_00083708 . 5' 2934 TCONS_00083708 . 5' 2934 EMBV3_24940 CAGCAGGATTTCCTAAATATCAGCTCCTCCCGGACAGGCCTTATGTGTTACCTTTACCCC Gene GeneID:528109|MPP5:XM_002690977:242_cdna UTR3_Alt 2 NULL GeneID:528109 10 GENE MPP5 NULL membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) EMBV3_43295 AAAAGTATCAGAATTTTAGATCTTATTTTTTTCAACCTTTTATTATTTTCACAGTGGAAA Gene GeneID:516881|SGPP1:NM_001077931:118_cdna Constitutive 2 NULL GeneID:516881 10 GENE SGPP1 MGC142448 sphingosine-1-phosphate phosphatase 1 EMBV3_07486 ACCACCTTCCCACCCGGCTAGCTAATTGTTGCCCAGTTTATTCTGCATCGGGAGAGTGAA Gene BVV0102_062970 - 0 NULL GK000003.2:55457203-56161892 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177679 1 XLOC_107452 NonCoding TCONS_00177679 XLOC_107452 NonCoding NonCoding - 3:55618493-55619050 - TSS132438 557 1 TCONS_00177679_1 37 1 0 7.32801552157039e-05 0.000270603262889592 6.64560938786577e-05 5.96347730655237e-05 0.000257053046797892 6.42200629078331e-06 5.23492656386398e-05 3.18565920968138e-05 0.000651609020269937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000634385756456528 0 3.15573579896498e-05 0 0 0 0 noncoding TCTTTTCTTCAAGGGAAGGAAATTGGCGGGGTGGAAGCATTTTTTTTTTTTTTCCCTCTCCTGATCTTTTCTGAACAGTCGTTTAAAAGGGGATAATAAACTCATCTCCTTCAAGGCCCGTTCTTTTTTGTGCGTGATGGGGAGCTGGGTGGAACAGGGCCCGCGCATCTCACAGCGCCATTCCTGGTTTCTTCGAAAGTGGCTGCCCTCACGGGCCCAACGGGCAGCTCTCATCTTCTCTCCTAATTAGCAATTCCCAACTGCCGGGACCCCCAGCCCCATTCGAGGGCGGGGGTACACAGCCCGCCGGCCTTGGAGTAGCCCACCACCTTCCCACCCGGCTAGCTAATTGTTTCCCAGTTTATTCTGCATCGGGAGAGTGAACGGGGGTAGCGAGGACTTCAGCGCCTCCGGGGCCTCCCCCCTACCAAGGCGCAGGCGGGAAGCTCCCGGAGCGGAGGTGCGAGGGGACCGCGGGGCAAGGCGGCCATCACCCCGCACGCAGCCGCGACAAAAGGCTGCGGCGCAGCGGCCGAGGCGTGAAGCCCGGGCGGCGG TCONS_00170010 . 3' 7770 TCONS_00170010 . 3' 8326 EMBV3_24678 CTGAGAAGTCATCAGCCGCGTGCTTTCTAGGTACTTGGATGTGTGCATCCCAACTTTGAG Gene BVT0102_190443 + 0 NULL GK000024.2:32646497-32680523 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24743 GAGCACTGTGGCTAGGCCTTTCAATACCAGGATAAATAGAAGCAGTGAGAATGGGCTTCC Gene BVV0102_373964 + 0 NULL GK000020.2:50652686-51282706 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43288 ACTCTGCATCTGGAGGTGGAGAGGAGGAAGGATGTGATATGGTCTGACTTTGGGTTTCCT Variant GeneID:513211|HSPBAP1:NM_001014911:56_cdna 158^525 1 EMBV3_41394 GeneID:513211 1 GENE HSPBAP1 NULL HSPB (heat shock 27kDa) associated protein 1 EMBV3_24129 CTATCTAGGGCCCCACCTTGAGTCACCTCATTAGCATAAAGACACTCCTATCATTCAGGG Gene BVT0102_127298 + 0 NULL GK000017.2:30113372-30144160 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18169 CCCCCATCAACAGATCTAAGAAAATATTTTGATCTTCCACAAAATCGCCCTTTTAGTCTC Gene GeneID:534624|CLIP1:XM_002694485:340_cdna Constitutive 3 NULL GeneID:534624 17 GENE CLIP1 NULL CAP-GLY domain containing linker protein 1 EMBV3_28230 GTGACGTGAGCCCTCTACTCCGGCACAGCAGTGAAGAGCAACAGGCTTATTTTTGCTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16877 ACAATGTCCTGGTTGAGAGCCATCAGAAAAGTCTTGGAGAAGCAGACAAAGCTGATGTGG Gene GeneID:280903|PTH:NM_173954:25_cdna Constitutive 0 NULL GeneID:280903 15 GENE PTH NULL parathyroid hormone EMBV3_00362 GGCATAAATCTGTGCCAACCAGAAAATCATCTCTGCTCCCTTTTCTCAAATAAGATCAGC Gene BVV0102_104084 + 0 NULL GK000015.2:67518042-67563697 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059925 1 XLOC_036538 Coding TCONS_00059925 XLOC_036538 Coding Coding LDLRAD3 15:67240026-67520720 = TSS44878 3717 1 TCONS_00059925_3 345 6 0.986779150174746 0.000199223476649088 5.94608614441214e-05 9.21168193358433e-05 4.69159360403453e-05 0.000410435264320199 8.98278062421778e-06 0.000222788044899168 6.04678528056695e-05 7.0049647470234e-05 1.88179967445391e-05 1.23173661442199e-06 0 2.31580336435233e-06 0.000151864338532374 6.52348823804639e-12 0.00106582581893944 0 2.41804375277528e-11 5.37675491484728e-05 0 0 2.19605457765156e-05 0.000308516269311563 0.000342594898990293 0.0001838725644303 6.25505439815244e-05 0.000167088602900007 1.5504734484527e-05 7.83634487316536e-06 1.53662218607786e-05 XM_005216382.1 LDLRAD3 PREDICTED: Bos taurus low density lipoprotein receptor class A domain containing 3 (LDLRAD3), transcript variant X1, mRNA. 0.0 6621 100.00 0.987355394135055 XM_005252796.1 LDLRAD3 PREDICTED: Homo sapiens low density lipoprotein receptor class A domain containing 3 (LDLRAD3), transcript variant X1, mRNA. 0.0 3097 78.19 0.999730965832661 TCONS_00059925_3 sp|Q86YD5|LRAD3_HUMAN LRAD3_HUMAN Low-density lipoprotein receptor class A domain-containing protein 3; 0.0 618 97.97 0.997101449275362 1 coding 0 0 0 0 1.10150396189652 0.102599644133637 -0.0330356162451046 0.499711566398135 ATGTGGCTGCTGGGGCCGCTGTGCCTGCTGCTGAGCAGCGCCGCGGACAGCCAGCTGCTCCCTGGGAACAACTTTACCAACGAGTGCAACATTCCAGGCAACTTCATGTGCAGCAACGGGCGGTGCATCCCCGGCGCCTGGCAGTGCGACGGACTGCCCGACTGCTTCGACAAGAGTGACGAGAAGGAGTGCCCCAAGGCTAAGTCGAAATGCGGCCCAACCTTCTTCCCATGTGCCAGCGGCGTCCACTGCATCATCGGCCGCTTCCGGTGTAATGGGTTTGAGGACTGTCCAGACGGCAGCGACGAAGAGAACTGCACAGCAAACCCTCTGCTCTGCTCCACTGCCCGCTACCACTGCAAGAATGGCCTCTGCATTGACAAGAGCTTCATTTGTGACGGGCAGAATAACTGTCAAGACAACAGTGACGAGGAAAGCTGTGAGAGTTCTCAAGAACCAGGCAGCGGGCAGGTGTTTGTGACCTCGGAGAACCAGCTCGTGTACTACCCCAGCATCACCTATGCCATCATCGGCAGCTCCGTCATCTTCGTGCTGGTGGTGGCCCTGCTGGCGCTGGTCCTGCACCACCAGCGGAAGCGCAACAACCTCATGACGCTGCCGGTGCACCGGCTGCAGCACCCCGTGCTGCTCTCCCGCCTGGTGGTCCTGGACCACCCCCACCGCTGCAACGTCACCTACAACGTCAACAACGGCATCCAGTACGTGGCCAGCCAGGCCGAGCAGAATGCGTCGGAAGTGGGCTCCCCGCCCTCCTACTCAGAGGCCCTGCTGGATCAAAGACCCGCCTGGTACGACCTTCCTCCGCCACCCTACTCTTCAGACACTGAGTCTCTGAACCAAGCCGACCTGCCCCCTTACCGCTCCCGGTCGGGCAGTGCTGACAGCGCCAGCTCCCAGGCAGCCAGCAGCCTCCTGAGCGTGGACGACACCAGCCACAGCCCGGGGCAGCCTGGCCCGCAGGAGGGCACCGCTGAGCCCAGGGACTCCGCGCCCAGCCAGGGCACTGAAGACGTATAAACTCTGGCTCTTCCAAAGTCTCTATGGGTTCATCTGCTCTGACCTTGACTGTCCTAACAACTTGCGCTTACAGGAGGCTCCTCGGGGTCCCTCAAGGAGTGATTTGGAGTGTCAGCTGTCTCTCCAGTCACCTCCTTGCCCAGGTTTCAGGAATGTTCTTTGGAGGGCGACCTGCCTTATTCTGCCTCTCAGTTTCCTGTTGTATGGTACATCTTTTCTGGGCACTTACTTACTCTTCCCTCGAGGCCGAGGATCACAGCCTCGCTCTCCACGTCATTCTTCTGTTACTGTTGGAATCTTGCTGAGGTGGTGGCGTAAGTTTGTAGGTGGCGGGCGAATGTGGTACTTAGGTACTGAGAAAGCAGTGTTTGTGTCACATGGGATGTTCAGAGGGGCAGAGGAGACTGGACCAAATTCTGTGTGGGCTGTCACTTAGAGCTCCCTCTGGGGATTCGGGTTGGGTGATCCTCCCAGGAGGCCGTCACTGGAGGTTGCATTAGGCTGCACGTTGCTCTTGGGTCAGCAGAGGCTGGGGCCAAGAAAACTGCTGCTGTGAGTAGCGCCCTTCAGAAGTCAGCAGTGTCGTTTGGTTTTCTCAAGGACTCTGAAACCATCAATTCTGGAGAGATTCTGGATTTAACAATTTGCCCGAGTCCTCATTTTGAGAGCTTTTTCCAGCATCATATACCATCAGCCTCATCCCAGAATAAGCAGGGAGCCCCCACCACGAGTTTATCCAAGTTCTCAGCTCCTAAAATACAGGCTGCCAAGAACCCGGGTCTGCTTTGGTCCACAGTCCTTTCCCTGGTTTCTGATTGTCACCCTCCCAGCTGTGACTTGCCTTAGCCAAGGGATGAGGACTAAACCTGAGTTGGCCAGAAATCTGATCTGGTCCTTCTGTCCCCATAAACCACACCCAGCCTGCCTTGCCCATTCATGCAGCTTCAACCCTCATCTCCCAAGTGCCCCCAGACACTCAGAAGTCATTCTACCTGTGCAGTTGGGCTTGAGGACACTGTGGGTTTCTAACTCACATGAAAACCTAGTTCAGTACCTGCCACAAGAGCTCCCCATTCCTGGGCTGCACTCACCCCCCACTTCCCGAGGCCTAGCCAGATACCAGCACCAAGATTTAGGATTAGGGTCAGAGCAAGAATCAGACCTCTCCAGACATCCCATAGTTTCTTCTCTGAGAGACGTGGATCACAGACAGTTTGGAGTCAAGATTTGCCATTCGGACTTTTTGTTTTTATAATCTCTTAGAAATGCATTTGAAACAGTGTGTTTGTTTTTTCCCTTCTAGTTAAGGGACTATTTATATGTGTATAGGAGAGCTGTCTTTTGTTTTTCCATTTCGCGAGGTCCAAGCAAAGATGCAAAAGATCGCGCCTTTGTCCCGCTGAGCTCTAATTACCAGTCCCCCCGCCCCCAGACTGCCCTGTGTGCCAGGCGTCTGTGCGTTGTTGCACTTTGAGTTTTTATTTATCGAGTTCGTGAAGGATACAGAAAGACCAATGCCTTTCTCCCTCAGTTCATGGTCTCTGTGTTCAGGCTCACTGTCCTCTTTCTCCGTGCCCAGCCAGCCACAGCGCCCACCCCCTCAGGAAGTCATGGGTGGAAATGTAGATGTTATTTGTCAAGAAACCACACTGATGAATGGGGGGAACAAAACTGGAACCAGGCAGAGCCACTCGGGGCAGCTGTCATGCAGACCAGCTTCCCACATGCTCAGTAACTTCTTTGATGCTAATTCAAACAGAGCCTGCAGGAGGGGGGATGAAGTGGCATTCAGTGATCCTGTTCTGTAGACGATTTTTTTTTTAACCAAATTGAAAGTGTGCTACAGGAAAGCTAGCCACTTGGTGATTTTCAAGTTAAGAAAAGAAACCTAGTTGCTTACGTCTTTTCGTTTTTAAAATAACACGCGTTATTTTCTGAGTAGTCCAGTGAAGAGAGAACTTTAGGTGGCAGCCAGAGTGTGTGAGGAACTCTGACCGAATATTTCCTATCATTTGAGTCAGAGTGGCTTCGTTTCTCCCCTTGGTGGGCCCCTGCTTCTTTCTGGTGCTCTGGAAATTGTTTAGAGGAAAGGATTCTAATTTTAATTAATTGTGCAGTGAATTAATTTCACGCACTTTTCAGCTTCCAGGCATCTTAGGAAAGACAAATGGTCTTAGTCGATAAGGAGAGCCTATTAATGTTGTTTTTTAAAATAAACACAGGGACATTTTTATTATAGATTTGATGTTTTTAAATGGTGGGTTTTTTAAAAAGATATAAATAGGACACCAAAGCAGCAGAGTTTTGTTTTTTCCCCTACTTAAGATAGCAAATAAGTGGCCAGCATTATTTCTTTAACTCATTCCAACCAGGATATTTTTTTAATACATGGCATAAATCTGTGCCAACCAGAAAATCATCTCTGCTCCCTTTTCTCAAATAAGATCAGCATTTATTTTAGCATTGAAATCGTTCCACTGTGATCAGTCACTTATCACCTGCCCTCAATCCCTTTACTTTGAAATTGACATTTTTTAAAAACACAAGGAAGTGGTTAATAAATAGCATGTGATGTTCAAAGTTGATGTAAACTGGAAAGGTTATGTGTGGTTGCTTTTTTGATTAGGTTGTTTTTTTTTAATTTTTATACTTTCAAATAAATTTGCAGTTTCATTCTTT EMBV3_23363 TTTGAAGGCCAGCCCGTGAAATGGCTAAATGCTCCAGCCAGGCTTATGTGACCTTGTTTC Gene GeneID:100297992|LOC100297992:XM_002694399:39_cdna Constitutive 0 NULL GeneID:100297992 17 GENE LOC100297992 NULL similar to spermatogenesis associated 5 EMBV3_04752 GGTCATCGCATTCCGAGTGTCTGCAATACAAGCCCTGATGGAAGGGAGATTGTAACTCAG Gene BVT0102_052066 + 0 NULL GK000016.2:61314124-61326455 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067782 TCONS_00067786 TCONS_00067773 TCONS_00067778 TCONS_00067780 TCONS_00067783 TCONS_00067774 TCONS_00067777 TCONS_00067785 TCONS_00067784 TCONS_00067775 TCONS_00067776 TCONS_00067779 TCONS_00067781 1 XLOC_041545 Coding TCONS_00067783 XLOC_041545 Coding Coding RASAL2 16:61168495-61321543 j TSS50895 11008 1 TCONS_00067783_4 1139 0.0306140988372093 16 0.928178925428137 4.81393642464987e-32 2.4440251011147e-16 4.60562100686165e-47 2.22531976137679e-34 4.70315244334482e-80 2.11693462294003e-28 2.41699051995253e-24 2.38426717720697e-57 7.81073806836766e-12 1.02741509143686e-05 5.31398886348161e-05 4.04558414558262e-16 3.85735785155863e-42 7.9902267908009e-05 1.05728604928637e-23 0.00269404115148217 1.31588924023566e-05 0.00250507563811853 5.2059319327421e-22 3.74506499921669e-28 6.81333490599638e-17 0.0003819638289211 2.0455298168909e-05 0.00041755078174478 1.90041861097577e-08 4.5170391885263e-24 2.07453287721813e-16 6.10093318800729e-05 0.000100694489770365 2.4216569566855e-09 XM_612667.6 RASAL2 PREDICTED: Bos taurus RAS protein activator like 2 (RASAL2), 0.0 1.652e+04 99.66 0.835301598837209 NM_004841.3 RASAL2 Homo sapiens RAS protein activator like 2 (RASAL2), transcript 0.0 9409 81.34 0.88780886627907 TCONS_00067783_4 sp|Q9UJF2|NGAP_HUMAN NGAP_HUMAN Ras GTPase-activating protein nGAP; 0.0 2230 97.89 0.999122036874451 3 coding 0 1 1 0 -0.0795151512988828 0.647187806218694 -0.0189019542467834 0.725697183128082 TGCATTCCAATCTGTCTGAGGCATTGAGCGGGAGCAAAAAAACAGAGAGAGAGAGCGAGAGAGAGCAGGAGCGTGAACAAGCGCAGCTAGTGTGGTATAGAAAGTGTTTTGAGTTTCTGACTGGCATGCCGGAAAGATCATGTTAGCAACACCCAGAAACTTCACGGAATGCAGACCCCAGAGGTGCCAGCAGAAAGGTCCCCACGCAGACGGAGTATCTCAGGGACCACTACATCTGAGAAACCCAACTCTATGGACACTGCGAATACCTCACCCTTCAAAGTACCAGGGTTCTTCAGCAAGCGCCTAAAAGGCTCCATCAAGAGGACCAAAAGCCAGTCAAAGCTTGACCGAAACACGAGCTTTCGGCTTCCCTCTCTTCGCAATACCGATGACAGGTCTCGTGGGCTGCCTAAACTAAAAGAGTCCCGTTCTCATGAATCTTTGCTGAGCCCATGCAGTGCCGTGGAATGTCTGGATCTCGGTAGAGGGGAGCCTGTGTCGGTAAAGCCACTCCATAGCAGCATCCTTGGACAAGACTTCTGCTTTGAGGTTACCTACTTAAGTGGAAGTAAATGCTTCAGTTGTAACTCTGCTTCAGAGAGAGATAAGTGGATGGAAAACCTGCGCAGGACAGTTCAACCAAATAAGGACAATTGTAGACGAGCTGAAAATGTTCTCCGTTTATGGATTATTGAAGCCAAGGACCTTGCCCCTAAAAAGAAATATTTCTGTGAACTGTGCCTTGATGATACCCTCTTTGCTCGTACAACTAGCAAGACCAAAGCAGACAATATTTTCTGGGGTGAACATTTTGAGTTCTACAGCCTTCCACCTCTTCATAGCATCACAGTTCACATTTATAAAGATGTGGAAAAAAAGAAGAAAAAAGACAAGAATAATTATGTAGGGCTGGTCAACATCCCCACTGCCAGTGTGACTGGTCGCCAGTTTGTAGAAAAGTGGTACCCAGTGAGCACACCTACACCCAACAAAGGAAAGACAGGAGGACCTTCTATTCGGATTAAGTCGCGTTTCCAAACCATCACCATTCTGCCTATGGAGCAATACAAAGAGTTTGCAGAATTTGTCACCAGCAACTATACCATGTTATGTTCTGTTCTTGAACCAGTAATCAGTGTGAGAAATAAAGAAGAGCTAGCCTGTGCCTTAGTGCACATTCTTCAAAGCACTGGAAGGGCCAAGGATTTTCTGACGGACTTGGTGATGTCTGAGGTGGATCGTTGTGGAGAACATGATGTCTTGATCTTCAGAGAGAACACCATTGCCACCAAATCCATTGAGGAATACCTCAAGTTGGTGGGACAACAGTATCTTCACGATGCACTGGGGGAGTTCATCAAAGCGTTGTATGAGTCAGATGAAAACTGTGAAGTGGATCCCAGCAAATGTTCATCCAGTGAACTTCTGGACCATCAGAGCAACCTGAAAATGTGCTGTGAGCTGGCTTTCTGCAAGATCATCAACTCTTACTGTGTTTTTCCTCGTGAGCTGAAAGAAGTGTTTGCATCCTGGAAGCAGCAGTGCCTGAACCGCGGCAAGCAGGACATCAGCGAGAGGCTCATCAGCGCCTCGCTGTTTCTCCGTTTTCTGTGCCCGGCCATCATGTCTCCCAGTCTCTTCAACCTCATGCAGGAGTATCCTGATGACCGCACATCTCGGACTCTGACTCTCATTGCCAAGGTCATCCAGAACCTGGCCAACTTTGCCAAATTTGGTAACAAGGAGGAATACATGGCATTCATGAATGATTTTTTAGAACATGAATGGGGTGGAATGAAGCGCTTTCTTTTGGAGATCTCTAATCCAGACACCATCTCAAACACCCCAGGCTTTGATGGTTACATTGATCTGGGCCGAGAGCTTTCAGTTTTGCATTCCTTACTATGGGAAGTAGTTTCCCAACTTGATAAGGGTGAAAATTCCTTCCTACAGGCAACCGTGGCAAAATTGGGACCTCTCCCTCGTGTTCTTGCTGATATTACCAAATCTCTGACTAATCCTACACCAATACAACAGCAACTGAGACGCTTCACTGAGCATAACTCCAGTCCAAATGTCAGTGGAAGCCTCTCCTCTGGGCTGCAGAAAATATTTGAAGACCCTACTGACAGTGATTTGCACAAACTAAAATCCCCAAGCCAGGACAACACAGACAGTTATTTCAGAGGGAAGACATTATTGCTGGTCCAGCAAGCCTCCTCCCAGAGCATGACTTACTCGGAAAAGGATGAAAAGGAAAGTAGCCTCCCCAATGGCCGCAGCATCTCCCTCATGGACCTTCAGGAGACGCACGCAGCCCAAGCAGAGCATCCATCTGTGATACTCGACGTGCCCATGCGCTTGACCGGAAGCCAGCTCTCCATAACTCAGGTGGCCAGCATCAAGCAACTGCGGGAGACCCAGAGCACCCCCCAGAGTGCACCCCAAGTGCGAAGGCCCCTGCACCCAGCCTTGAACCAGCCAGGCAGCCTCCAGCCCCTGTCCTTCCAGAACCCTGTCTATCACCTCAGTAACCCCATTCCTGCAATGCCAAAGGCCTCTGTGGACTCCAGTTTGGAGAACCTAAGCACTGCCAGTTCCAGGAGCCAAAGTAACAGTGAAGACTTCAAACTCAGCGGACCCAGCAACAGCAGCATGGAGGACTTCACCAAACGGAGCACGCAGAGTGAGGACTTCTCCAGGCGCCACACCATGCCCGACAGACACATACCTCTCGCCCTGCCGCGGCAGAACAGCACGGGGCAGACCCAGCTCCGGAAGATGGACCCGGCGGGGCTGGGCGCCCGAGCCAAAGCCCCGCCGTCCCTGCCGCACAGCGCCTCCCTGCGGAGCACCGGGAGCATGTCGGTGGCATCAGCGGCTCTGGTGGCCGAGCCCCTGCAGAACGGGAGCCGGTCCCGACAGCAGTCCTCTTCCTCCAGAGAGAGCCCGGTCCCCAAAGTGAGAGCCATCCAGAGGCAGCAGACCCAGCAGGTTCAGTCACCTGTGGACTCCGCCACAATGTCCCCAGTCGAGAGGACAGCAGCCTGGGTCCTGAACAATGGGCAGTATGAAGAGGACGTGGAAGAGACTGAGCAAAATCAGGACGAAGCCAAGCATGCTGAGAAGTACGAACAGGAAATCACCAAACTGAAGGAGCGCCTGCGCGTGTCCAGCCGGCGACTCGAGGAGTATGAGCGCCGGTTGCTAGTGCAGGAGCAGCAGATGCAGAAGCTGCTGCTGGAGTACAAGGCCCGGCTGGAGGACAGCGAGGAGCGGCTGCGCAGGCAGCAGGAGGAGAAGGACAGCCAGATGAAGAGCATCATCAGCAGGCTAATGGCTGTGGAAGAGGAACTGAAGAAGGATCATGCTGAGATGCAGGCAGTTATTGATGCAAAGCAAAAAATAATCGATGCACAGGAAAAACGGATCGTGTCGCTGGATTCGGCCAACACCAGACTGATGAGTGCGCTGACCCAGGTGAAGGAACGGTACAGCATGCAGGTCCGAAATGGCATCTCCCCCACCAACCCCACCAAGCTTTCCATCACGGAGAATGGTGAATTCAAAAACAGCAGCTGCTGACGGACGGGCCTCACAAATAGACAGACTGTGGGAGGAGACAGAAGGAAACGTCCCCACTCTCCTGTCCCCAGCCCTCTCCCCAGCCCCACCAGGTTTACAGAATGCCGCTGCTTCAGAACAGCAGGGTGGTGAGCAAGTCTGGAACGGAGAAAGGAACCTTGTCTTTCAGGGCATAAGGCTAAGAATTCCAAGGTCGACGCTTCCCCCACCCCCACCCCATGTCTCTGTGTACATAGGGAACTTAGTTCTGGGCCATGTACAGAAAATACCACTGTAATATACCCAAAGGAAGTTAATAATGTAGATTACCTTTTTAACTATTGCTATTTTTATTATCGTTGTCCTCTTGTTGAAAGCACTGCAGTTGTTAGAGGAGGAAATGTAGGAACTATGTACGTGAATGAGAGTTGAGCCCAGCCGCTCAGTAGGTAGAGACCACACATCTGTCTGATAGAGCACACGGTCCGCGACAGGACATGGTCAGAATGAATTTTTCAGGGATTCATCTGCCAGGTTAAAAGCCCCGCTCTGGTTCCCTTGTCCTGTAGGAAAACACGCAAATTACCAAGATCCAAATGAAACAGTTCATCCCACTGATCAAGCGGGACTGGTTCTACATGGACAGCTGATCTGCTTGGGGACACACTGTCCCAGAGGACACAGATAAGAGCTGTTGCATTGAAACCGGACTCTAGGAGGGGTTTTTGTTGAACTCCTGTTGATGTTCATTTCCTTCTGTCTGTAGCAGATGGAAATTTTTCCACTTTAGGTAGGGGTTTTTTTTTTTTTTTTTTAACTCCAGTTGTAATAAAAGGTGTTCTTTTTCCTCTTTAGAGTTTACAAAACTATAAATATCTGTGTCTCTAGAAACCATCTTCATCTTCACACACCCACTTGCCCTTTCCTCCCCCATGGTGGGAGCAGTCATCACCAACAGGGTTTACTCTCCCCTGGAGAGGTTATTCAGATCTACTGTCCATAAGCCATCCAAAAGAAACACCCTTTCTTCCGTACAGAAAAGGGCTAACCATATCATACTATAGCAGGAAGCTCTGAATAGTTCCCAATTAAAAATTTTTCTTCTATTTGTAAGTTACAACTCTGGTTTGGGATAAAGATTTTATCCAGTGTACTAGCAGGTCTCGGGGCAGGGTAATTTTATCTCAGTCTTTCACTTTTAAATTGCTTCTTCTTTTAAATTTGGACAAGAAATCTAAATCAGAAGCATTGCTCTCTTAAAAGTTGTGATTACTCTTAATGAAAAATAAAATACTGAAAGTGGGAGGACAGCGTATTCCAGCTGTTATTCCCATGCTCTTTGTATATTTGGCAATAATAACCCAGTCACTAGTTGTCATCCATGGCTTTATTGTAGGACAGAAACAGTTATGGAAGTTCATTTACTTCCTTTTTTTTTTTTTCCCCAGAGGTGTGAAACGTCATCTTAAATGCAACCTTGATTATCAGAAGTATGAAATGTTACAAGTTAGACAGATAGTATATAGACAAGTATATATACACATATATTCACACATATGTACATATAACTGCACAAATAGGAAAAGTTCCTGCCTTCTATGCTGTCGGATTTAATGTTACAAGGAGTTAGAATCTCATTAAGCAAGATCTAAGCAATTGCTTATATTGAGAAAGCAACCACATTTCTCAAGTAAGTTAATGATGTTTATTTTAAATGATAAACTTTAGGGAATTTTTTTTTTTTTTTTTAAGGGAGAGGAGAGAGGGAAAAAAACACCCGAGGAAGCCATATGCATGGAGTGAGTGTTTCCACATAACAGAGTACTTAGAACTACAAAGGGGACGAGAGAACATTTATCAGGTCCCCTTCTGGGTGACGCCCCAACAGAGTCACCAAGCTTCCCTTTCCACTGTACCGCAGACTTGCACTCTGACCTCTTAAGCACTGCCCTCCAGTAGATCTTTGTGTTTGACCTTGTATTTCAACAGCCTCACATGGCCCCTGACCCACAGTCTTTTGAAATATGTCCCCTCTGTAACATCCCCATTTCTGCCTGTCGAAGATCTAAAACAGGAGCTGCCTGGTGTGCTCATCTGATCTGCAGACATCAGGCCACATAGTTTGGCACTTGTGTGTTTTCTTGACCCCTGGTCATGATTTTATAAATTCTTAGCCCCTTTCCCTCCAAGTTGAGGGCACACTGTGACCAAAATCACTTATTTGAATAGGAAAAAAAAACTACCAATTCTGAAGCAGTGCTCAGTGTTGGGGGAGAGGGTATGTAAACATAGGTCTGTTCTTGTTTGTGACTATTTTCAGCTCTAGCCATTCTCTATAAAAGCCTTCAGAAAACCTGGTAAAAGAATGGTCAGCTTCAGTGGCCTTAAGTATGTATCGTTGGTGATGTCTTGCATTGAGGTTTGGAAGTTCTTGGGTAGTGGTTATGGATGACAGAGGTCTAATAAACTATTTTGGAGGGTTGGGGGAGACACACAAAACCAAATATGTTTTTTTTTTTTAATTTAAATTTATGTTTTTGATGGATGCAATACATCTTATCGGCATTATGTGAGCTTCTGAGATGGCTGCCTCACTTGGAAGATTAGATGCCCAAAATGTTTGTATAGCTTATGCAGCCCTCTGTTATTATCAGGTTATCTTGAATGAAGAGGAAAGAGTATACACAAATAATAAAATCAGAGGTAAGCTAGAAGTTCAGTGTAGTTGCCAGATGTTAAATTTTAGATTATCCTTTGAGCTTCTTCCTATCTGAATATTTTTTCTGAGTATTTGTTTAGAGAATGCTGCAGTCTTACAGAACTTATTCCAAAAGATTTTTTAAGTATGGAAAAAGTCAGCAACAGCCAATAATTTTTATGGAGGTATTGCTCAGTTGGCTTTTCTTCAGCCCAAATAAGTACACACCTCTGTTTTACTCAGAGGAGGTGCGTGTTTGAAGAGAAGTGGGTGGATTAAGATAGCACATCTTGCACGCCCTCTAACACCCAACACGTCACCGCGTGATGGGGTGCAGCGTGGACCAACGCTGGAGTTTGGAAATCAGATGAAGTGCTGGCAGAATGCTTGTCTAGCTGACAACCAGACTAGGCCATTAATAAGGACAACATTGGCAGGATTTAGGGAAAGAGCTTAATACTTCCCTTTTATTTTCACTGGAGCAATACGCTTTCTGAGCTGAAGCAGCAAGAAGTAATAACATTTCCTTCAGGTCATCGCATTCCGAGTGTCTGCAATACAAGCCCTGATGGAAGGGAGATTGTAACTCAGTAACTAAGACAAACACTCGACCACTTACTATGTTCCAGGCACTGTTACCGAGGTTCTGCTGGGCTCCAGGGCAGTCTGCTGTAAGAGAAGTGTGGTAAAGTGAGGTCCCCATGCTGCTGTAACTTGGCCTTTTGCACTTGTCACTGAATTGGTCAGAATTAGCTTTCTCTGGTCCACTTCTACCGTCTCCTATGATGGTGCTGGACAATGAAAGAAAAAGTAGGATTAACTATCTAGGACTGCTGTATCCCCTTGAGAATTAACTTGACTTCCGAGGTAAAGCTTTTTGGATCCCAGTCTGTTTACAGATCTGTAGCTCTGCCGACCCTCAGCTCTCTGTCTGGCCCCAGAGGTGCGCTGGGTTGAGAGCAGTTCTTTTTTGGAAGCCCCAGAGCAGGACTTTGCCATCAGGTGAGTTTGGTCAGAATTTGTTCTGCCTTCCATCTAGGTTCAGTTCTAGTCATCTCCATTTTGGAGTTTCTGAGAAGACTGGTTATGGGACTGAACTTGGGGAAGGAATCCTCCTTGGGATGACTGAAGGCCCCCGTGACCCTGACTAGAGTTGACACCAGGCTAGACTTGTCACTGGGCGGGACTCAGCGGCTCTGGAGCCCACTTCACAGCTTCCCTGGACTTTCAGCCACTTCTCCAGGGGCCATCTTCTACACATTATGGGCTTTCTTCTTCATTTCCCCTTCCCTTTTTCAAATCTAATAGTGAAATCTCCTGCTCACTTCAGCAGTAAATAGTTGCCTACGCACCCCCTACCAGAGGGCCAAGGATTTGGGATACTTTGGTTTTTTAATCAATATGTCCATTGAAAGGGCCTATTTTGTTTCCTTTTTTAAAAGCAAGATATGTTGGGGTGTTAAATTTTTAAGTAGACTCTCTGTGTTTGAGTGATTGTTGTTAGTTCTAGAAGCATTCTCTTGTCATGACCCAGTTATGAATGCTCTAGAGTTTAGGAAAGACAAAAGTGATGAAATTTGCATGAGGTAGAATAAATATCTTATGAAGAGTGAAAGAACCTGAGAAGATACATGATCCAAAAGGGTCTAATGCACAGCAGTCTTCTTCAAAGCCCAACGGGTTCAAGGAAACAGGAGGATTTATTCTCCTTTGCCCCATCTCAAAATATACGAGATACGTAGAAAGGCAGTTTCTGTAGAAACATGATGTGGGCACCCACGCAAAACACATGATTCTTAGGGCTTCCTTTTTCTGAATGTTAATCCATCTCATCAAGCAGTGATTCCCAAACGTCTTGAGATTTTTAGATTTTATGCCCTCATCTGTTAGATTGTATGACAGTGGTTCTTTCCTCTTTAAAATGTACCATATGTGTTATATGTATATATGTTAAAGTGACTTGAAATTGACTTGGTTTGACATTATCTCAAGAACCCAAGATAACATTATTGATACCTTGGGAAGTCATAGAAATAAAGTTGAATGTCACTGATCTGAGAGTAGAGTCCAGAAAGAAGTAGCTTTGGTTCCTGATCGGTTTATCCTCAGGTGTTTGAGTAAGGCTTGGCCATGAGCCACCCAAGGAGCCAAGTGGTGGTCTGCGTCCATATTTCAGCATGCATTTCAATTTTCTCCTCAGTTCTTAGTGTTCATTGCCTTTGTTTTTTCCCAGGAAATGTTTTAGTTTGAACCTTAAAACCAGATTTATATATTGTAAAAAGATTTTCACAGAGACTGTGTTTTAGGAGGCCTCAATCATCTGTGTGGGATGTATAAAAATTTAAGAATAAATATCATTTTTATGTCATTTCTACACTCCCAAGGGAAAATTTCAATTCCCAGCTCACCAAAAGGTTAAATACTAGTTGATTTAACCACTATCCTGCAGAAAATTTGAAATAGTAAAGGTTAAATTTTGACTGGTGCTTAGACATTTCCTCATTACATTAACTCAAGACAGCAGCATATTAACCTGAATCACACCTGTAAGGAACTTACCTTCTAAATTTGACTTTGTTCTTCATCTCCAGGGCCTTAATAAGAGTGTGTTAAAACACATGACTATTTTACAATGATAGCTCTAAATAATTTATTTTTTATTTCAAGAAAGAAATACACGTTAGAGAAACAAAACCCAAGATTTTATTTTATTTTTAAAGCCATATTTTTGTGCTAGTAGCACTTAGATTGTTCCATATGTGAGATCCATATCAGCATTTCATTACCTGGGTTTGTTCTAAAAGAAGATTTATTTTTGTTCTGTGAATAATTTTTGACAGTTCTTGTACATGTACAGATATAGATACGTTTGAGGTCTTTTATTGATATTCCTATGAAGAATACAAATAAACTTTAACTTTAAACATTTCAGACTAAGGTTGCTACTGTATTTGACATATTACTGTTTGATTTCTAGCATGTCATCTGGGTGATTAGGACACTTGGAGAAGAACCAGTAACAAAATCTATGTAGGAATATTATGCTGAAGGTATATTTTAACATGAAGAACAGCATGTCTTAGAATTTCCCAACTTAGAGGGAAAAAATATTTAGCTGAAGGGCAAAGATAACATGCATCATATTGTAACAACACCCTTAAAAAGCTCCTCATTCTGGAAAATTTGAAATCTCTTTACCAGCTTGTAACTGAATAGAAAATGGAAGGATAACCCTACTGAGCACTCCAGACCAGTACTGGCCTCTCTTAATTCCTCAATAGATTAACAGGGTTTATTTCAGGGTAGTGTTGTTTAGTTGGGACTTTTTTGCTGCTGTTGTTCTTATTTGCTTATTATTCTCAAGGTTGTTATTTCCACATTACCCCCATCTTCTGCTTACCTATTTCATTCTTTAAAACCCCAAGATGCAGGTCCCATAAGCAGTTTTCTTACATGCTAAGTTTAGTTCTGAAATTCCACCAGTTAGCCTCCTCACATATCTAGCTACTTCTTCTATTCTACTAGGAATTAAAAGACTAAAATTCACTCAAAATCCAGAGAAAATTGTGCAAGGTCACAGTAGACGTGTTATTTTTTGTTCACTTTGAAGCCGACCCATTTCAATCTGAATTGCTCATGACCTAATGTAAGTTTTAAGACGTCTTGGATCTGAAAGATCAAAAAGGGAGAAACTATCATTGATGCTATCTTGGGACCTTCCAGTCTTAGCCCTTAACTGTCCACCCGTCTACCCTTTATGTCCAGCCATACGCTTTACTTTTCTTAGCTTCCTTCCAGCTACCTGCCTTTTGTTGTTAGTGCCTTCAACAATAGGAAAGTACATAAATCAAGTTTGTTAGACCACCACTCCCCGCCCACACACACACACAGTTTAATGATAAAGGGGCCTAAAACAAATGACTTAATCAAGAATTCTCAATCCTGACTGTTCATCAGAATCACTTGAGATCTTAAAAAAGTGAACGTGGAGATGGGCCTTTAGGCCCTCCACTGAACAATTAGATGGAGACTCTAAGGACTGGACCAGGGATTACCCAAGGGATTCTAAATTCAGCCAGGTTAATGACCGCTGGTCATATCTTGCTCTGAGCACTGTGTGTGTGACTGTTACAATGTTCCTTCCGTCACCGTCCATGGAACTGGGTAAATTGGCTGTAGGTGTTTTTTTTTGCCTCCTGTTTGGGATGTTAAATGCTGGTAAAAATGATAATATGTACTCTACCTTGTCCCTGCCAATTCCATCCTTTAAATATGTGATAGAAATTCTCTCTGTTAATATAGGATAGCCATATTCCAACAAGAGTGACCAAAAGCTGGAATTTCCCATCTTGACCCCAATCTTCCCATTATTGGTTTTAATTTAAAATAAAATGTAGATGGTTTCTGGTTTGGAACCCCGTCCCCTGACCCAGAAAAGGGGGAGGCTACCTTGACTTTTGTAGATTTAACACTCAGCACTGCAGTCTTATTACTTGAACTTTTACTAAAAACAATTTTATCGGAAGCCAAATTGCATCATTTGCAACCTCTTCTTCCTTCAGTGAGGGCTTCCCTGGCGGCTCAGATGGTAAAGATTCTGCCTGCAATGCAGGAGATGCAGGTTCGATCCTTGGGTCAGGAAGATACCCTGGAGAAGGGAATGTCTATCCACTCCAGTATTCTTGCTTGGAAAAGTCCATGGACAGAGGAGCCTAGTGGGCTATAATCCATGGAGTCACAAAG EMBV3_42512 TGGACTGTGTTTTCAGGAAATAACCGCACTGCCTTCAGCAAGTCTGCACCACAGCATGTC Gene BVT0101_015455 + 1 EMBV3_34761 GK000017.2:60219-78742 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21126 TTCTCCGCATCATGTGGTACTCAAGCTAAGAGCCCTTCTCTGTTCTGGGTGCTGACACCT Gene BVT0102_406699 - 1 EMBV3_40318 GK000018.2:14599519-14610727 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23127 TTGCTTCCCAGCAAGAGAAGCTACTGCAAAGAGAAGCCCGCACACCGCAACTGGAGAGTA Gene BVV0102_052221 + 0 NULL GK000029.2:12580160-12658759 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164535 TCONS_00164534 1 XLOC_100253 NonCoding TCONS_00164535 XLOC_100253 NonCoding NonCoding - 29:12609998-12613878 - TSS123098 583 0.483704974271012 3 0.850476927043052 0.00137690658305303 0.00179251639175051 0.000761907205488573 0.00106828710988294 0.000889199983562729 0.00011044043578979 0.000435127625265467 0.000197154257072259 0.000148870284512608 0 1.17796460792848e-05 0.000232137918108071 0.000118117788525235 0 0.000260878453947763 0.000815450363862803 0 0.00219491332963277 0.00104550506519488 0.00207231776923683 7.98418938906464e-05 1.27283362409379e-05 0.000447105791531288 0.000977697846518626 0.00146175320263705 0.000537775567787126 0.000452249910320059 0.000131803204939702 9.15961785286327e-05 0.00022687750471562 XR_232325.1 LOC101903184 PREDICTED: Bos taurus uncharacterized LOC101903184 (LOC101903184), 6e-121 437 100.00 0.413379073756432 0 noncoding 1 1 1 0 -0.302335479174853 0.0702531008730624 -0.0773939682820291 0.15878415410117 TAAACTCCTCCCTTGGTTCACAGTGTTTACAAGAGGACTTAACTCTTCCCCAAAAAAACCTCTGTCTTAGGAAATCAGGGTTGCCTTTTTTGTGTATTTAAGAAAAAAAAGTGATGCTGCTTAAACAAAGGAGACATGGATTCAGTCCTATCTCGGAAGACCCCACATGCCAAGGAGCAACTAGACCCATGGGCCACAAGTACTGAACCTGCAATTTAGAGCCCTCGAGCTGCAATTTCAGTATCCCACACACCTAGAGTCCTTGCTTCCCAGCAAGAGAAGCTACTGCAAAGAGAAGCCCGCACACCGCAACTGGAGAGTAGCCCCTGCTCTGCCCATAACTAGAGAAAGCCTTCGCACATCAATGAAGACCCAGCACAGCCAAAAATAAATAAATATAGATTTTAAAAAGGAATTATGTGCTTCAGTTTTAACTGCATCACATTCTAAAATTCATTTCCCAGATTACCTGGTGGCGGAAATTCTTGTGAGTCAAAATAAAAGCCCTGTTCTTCTTAGCACTTAAATCATTTTCTGGTGGTGATTTCTGCTCTGAGAAGCCAGTTCATCTAATTTCAGGACT TCONS_00164532 s 5' 29796 TCONS_00164532 s 5' 30248 EMBV3_40439 GCACAGAAAGAGACTGCACAACACGATAGCGCTGGGGAGGCATCTGGCGTCACGGCTGTT Variant GeneID:508598|TMEM11:NM_001097998:493_cdna 534^613 2 EMBV3_20537 GeneID:508598 19 GENE TMEM11 NULL transmembrane protein 11 EMBV3_13020 GGTAGGTGCCGTATCTTGTACTGCTACATCGACAAGTGTATCGACCGTTGGACATACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_00445 AGTTTCAACTGTCTGGAGGACACAGAGGCTGAGGTATTTCCAGGGCGACAGAAAGGCCAT Gene GeneID:512010|ARAP2:XM_002688221:122_cdna Constitutive 0 NULL GeneID:512010 6 GENE ARAP2 NULL ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 EMBV3_31933 TGGCGGCGTCACCATTGCATTCCCATCGGACTCATGCACCTCCCTGATGATTTGGGGTTT Gene GeneID:541166|ETV5:XM_002684842:193_cdna UTR3_Alt 2 NULL GeneID:541166 1 GENE ETV5 NULL ets variant 5 EMBV3_00525 GACTCTGCCCTCAAGAGGAAAAGAAGGTTAAGGAAAGGGAACGATTAAGTAGCAGCCCTG Gene BVV0102_278245 + 1 EMBV3_35624 GK000005.2:26539250-26580497 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15544 CCAGCATGGTCAGTGGTACTGTTTTTCCGGGCACAGAGATTAAACCAGAATTTGGCACCT Gene GeneID:616594|GPR137C:XM_002690463:360_cdna Constitutive 0 NULL GeneID:616594 10 GENE GPR137C NULL G protein-coupled receptor 137C EMBV3_10796 TTTTTGCCATGGGAGCCTCTTTGTTATACCCTCTCCCTGCCAGAGCCTGTTGATCTATGC Gene GeneID:510653|LYSMD1:NM_001077898:85_cdna Constitutive 0 NULL GeneID:510653 3 GENE LYSMD1 MGC151893 LysM, putative peptidoglycan-binding, domain containing 1 EMBV3_01271 GAAATTACGTTGGAGCTGTCATGCTGTAAATATCCTCGCAAGGAGAAGCTTCCAGGCTTC Gene GeneID:513281|CPD:NM_001101086:31_cdna UTR3_Alt 2 NULL GeneID:513281 5 GENE CPD CPM carboxypeptidase D EMBV3_08674 GCTAATGAGGAAGGTCTGGCATCATTGCAGATGTTTCAAATAGATAATGGGGTACTCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36559 GGCCCGTGGGCACTGGACTTAAGCATTGGCTTAGGGATGACTTTATCCAAATTGTCTTGC Gene BVT0102_375214 - 0 NULL GK000028.2:16802910-16999030 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160232 1 XLOC_097610 Coding TCONS_00160232 XLOC_097610 Coding Coding RHOBTB1 28:16727299-16809553 j TSS119889 5203 1 TCONS_00160232_9 698 10 0.936865524661714 4.62183907504736e-05 0.000126661717364613 9.32676096995711e-05 0.000236922408803494 7.29926759803942e-05 9.78833497442977e-15 0.000240040529597322 0.000621342526252777 4.21327623760851e-05 3.20163363708346e-245 8.9253820162823e-58 1.69756863124137e-215 5.70839842719724e-29 2.36026592168231e-36 7.85104912581586e-05 8.65563100604993e-38 2.22328833028579e-47 1.39632195502155e-22 0.000642948628391595 9.95830254743628e-05 1.30499840488716e-71 1.28962482733879e-189 8.04923590069291e-33 8.99245084962603e-34 0.000649519244409013 0.00041774193063518 0.000375505175270395 5.28993708640981e-44 1.44474749641904e-17 2.89656596922514e-54 XM_005226302.1 RHOBTB1 PREDICTED: Bos taurus Rho-related BTB domain containing 1 (RHOBTB1), transcript variant X1, mRNA. 0.0 7440 100.00 0.792619642513934 NM_014836.4 RHOBTB1 Homo sapiens Rho-related BTB domain containing 1 (RHOBTB1), 0.0 4868 85.95 0.792619642513934 TCONS_00160232_9 sp|O94844|RHBT1_HUMAN RHBT1_HUMAN Rho-related BTB domain-containing protein 1; 0.0 1318 93.70 0.998567335243553 3 coding 0 0 0 0 0.137729540148897 0.292685656023015 -0.0136892339375878 0.807157009063215 AGGTATGATTCACAGCTGACATCAATTCCCAATTAGTCAAAACTTCATACAGCTGGCCTCCTGAGGCTAAAGGGTCTTCTCGTTACCCAACTGAAAGTGATTCGGGCAAAGCCTGCCTGTGGTACTGGGGAAAGGGGTTCCTGATGCAAGGTTATTCCATGTGGATATCAAAGCCAAGAGAAATGAGGAGGGGGCCCCGGATGGAATGCTGAACAGCGTCAGGTCCCAGAGCAGTCTGACATCTGGGAGAAACACCTACTCCGGTGGAAGTACTAGAGATCCAGAATACAAGTTTCAGGAGAAACAAAGGGTCTTCGGAGGGTCAGGTCATTTACTTCCCCACTAATAAAGAGCCCCAAACAGGGTCTGTCTTTCCTTTCTGCCACCATTCGCTGGAGAGGCACACAGCCTCCTGCCTGCTCCGTCAAGACTGACCCCACTGCCTGGAGGTGAGAGCCATAGCCGTGGTCGTTCCGGAAAGCCAGCGTGCAAGACAATTTGGATAAAGTCATCCCTAAGCCAATGCTTAAGTCCAGTGCCCACGGGCCTTACTTAGTTCTCTAGTCCAGATGCATTTCTTCAAAAGCCAGCATACCCCCTTTACTACATCTCCAGCCACCTGATCTGTAAAGTACCGCAAAGTTGTTGGCTGTTCCCCTGTTAACTCTGGGAATATGCTCGGGCAACTGTTTTTCATTATCTTTCTACCAAACTCCTTAAAATAGGTGCATGTCTTCAAACACTGGTAGTGCTTGTCCATGAAATTTGCTGCCTAACACCTGGAACTTGCCATCCAGGATGACATCCTTTAAACAGCCAAGTACAACACCCCATTCTGCATCCAAGAAGGCGATGAATGGTCCGCACAAACCAAGCCTCGCTCAAGCTTCTTGCAGTCTTAGCTGCATCCCTGGCTCAGATCGCCGGAAGTGGCCTCTGCGCCTGCACGGAGGCGGGGTCTGAACTAGTTCGGCAGTGGCCACGTGACAGCCAGGTTCTGCGGGTCGGTTACCGACAGATGAGGAGTAGGTTTATTAAATAATAGAGAAAGACCCTCTCTAAAGGAGTTTTATAGTTTTATAAATGGACGCTGACATGGACTACGAAAGACCCAACGTGGAAACCATCAAGTGCGTGGTTGTGGGAGACAATGCTGTGGGGAAGACACGCTTGATCTGCGCCAGAGCATGTAATACAACGCTGACACAGTACCAGCTGCTGGCTACCCACGTCCCCACCGTGTGGGCCATTGACCAGTACCGAGTCTGCCAGGAGGTCTTGGAACGTTCCCGGGATGTCGTTGATGAAGTGAGCGTTTCTCTCAGGCTTTGGGACACTTTTGGAGATCATCACAAAGACAGGCGTTTTGCATATGGCAGGTCCGATGTTGTGGTCCTCTGTTTTTCGATCGCTAATCCCAATTCCCTAAATCATGTGAAAACCATGTGGTATCAAGAAATCAAGCACTTTTGCCCTCGCACACCTGTTGTTCTAGTTGGCTGCCAGCTAGATCTCCGCTATGCTGATCTTGAAGCTGTTAATAGAGCCAGACGCCCTTTAGCAAGGCCCATAAAGAGAGGGGATATTCTGCCCCCAGAAAAAGGCCGAGAGGTTGCAAAGGAACTGGGTATACCCTACTATGAAACAAGTGTGTTTGACCAGTTTGGCATCAAAGACGTGTTTGACAACGCAATCCGAGCGGCGCTCATTTCGCGACGGCACTTGCAGTTCTGGAAATCCCACCTGAAGAAAGTCCAGAAACCTTTACTTCAGGCACCATTCCTACCTCCAAAAGCCCCCCCACCGGTCATCAAAGTTCCAGAATGTCCCTCCACGGGGACGAACGAAGCTGCCTGTTTACTGGACAATCCTCTGTGTGCCGACGTCCTCTTCATCCTCCAGGACCAGGAGCAGATCTTTGCACACCGAATTTACCTCGCTACCTCCTCTTCCAAGTTTTATGATCTTTTTTTAATGGAATGTGAAGAAACCCCCCACTGGAGTGAAGGAGCTTGTGAGAGAGAGAAGCAAAGCAGGGATTCCCAGGAGTGGGCACAGAGTCTTGACCCAGATGAGGAAAGGGAAGAGGGCACCCCAAGGACGCCTCAGGCTGATCAGTGGACCCCCTCGAGCCAGAACCTGTCCCAACAGGAGACCCTGGGGCTGGACGCTGAGGACCTGGTGGCAGAGACACAGACCCTGTTGGGCTGGAGCAAGGGGTTCATCGGCATGCACAAGGAGATGCAGGTCAACCCCGTCTCAAAGCGGCTGGGCCCCGTGACCGTGGTCAGGATGGATGCGTCCGTCCAGCCAGGCCCTTTCCGGACCCTGCTCCAGTTTCTCTACACGGGGCAGTTGGATGAAAAGGAAAAAGATCTGGTGGGCCTGGCTCAGATCGCAGAGGTCCTGGAGATGTTTGATTTGCGGATGATGGTGGAAAACATCATGAACAAGGAAGCCTTCATGAACCAGGAGATTACGAAAGCGTTTCATGTCCGGAAAGCCAATAGGATAAAAGAGTGTCTCAGCAAGGGGACATTCTCAGATGTGACATTTAAGCTGGACGATGGAGCCATCAGTGCCCACAAACCGCTGCTGATCTGTAGCTGCAAGTGGATGGCTGCCATGTTCGGGGGGTCGTTTGTCGAAAGCGCCAACAGTGAGGTATATCTCCCAAACATAAACAAGATGTCAATGCAGGCAGTCCTGGATTATCTCTATACTAAGCACTTGCCACCTAACTTGGACCTGGACCCACTGGAACTAATTGCCTTGGCAAACAGATTTTGCCTGCCACACTTGGTTGCACTTGCAGAACAGCACGCCGTCCAGGAGCTGACCAAGGCCGCCATGAGTGGTGTGGGCATCGATGGGGAAGTTCTCTCTTACTTGGAATTGGCCCAGTTTCACAATGCCCACCAGTTGGCCGCCTGGTGTTTGCACCACATCTGCACCAACTACAACAGTGTCTGTTCCAAGTTCCGCAAGGAGATCAAATCGAAATCTGCAGACAACCAGGAATACTTTGAGAGGCACCGCTGGCCTCCTGTGTGGTACCTGAAGGAAGAAGACCACTACCAGCGTGTGAAAAGGGAAAGAGAGAAGGAAGACATTGCACTAAATAAACATCACTCGAGAAGAAAGTGGTGCTTCTGGAATTCATCTCCAGCGGTCGCCTGAGGTGGAAGAGGAAAAAAAAAAATCAAAAATCTGACACGCCACTCAAAAGCACTACTGTAAAATGAGTCTTATTTTTAGAGATAACATGTAGTTCAGGTTTCAGGCACTGATCTTCCTCCACTTTTGTGCATTTATCTTTGTTGGGATCAAAGCACAAGCTCACCATCAATGAGCCTGGACAAAAAGGGAAGTTGACGCTCACTGCATTCCTTAAACTTATATGTATATTTTTTGTTAGAAGGCTTAATAAACTTTAGTCTGGTATCTCATTTCTTTTTATACAAAGGAAAAAAAAAAATCCAGCTTTCATGTTTCAAATTCCAAATTGGAAAATATTTTTATACGGTCTCTTGTAAATGAAAATACTGTGTATTACTTTATTTTACAGGACACACATTAACCATGAAGTCGCCCTGCGATTCTCTTTGCCCACGAGCATTATTACTTAATTAGAGGGATATCCTTTTGTCGTGAAGTAAAGGGTTGGAATGAAATTCCCCAAAGTACAAGTTAGGGAGGGTTTCATCTTTGTTCTGCCGAATAACACTGGTATAATTACCAAGTCAACTCCAAGAATGTGTATTTACAATATTTGCTATGTAAGTGCTAGTAATTATATGGTTATATGTGCCATGTAAAATATAGTGATATCAAATCTTCTGTTGTTTAAAATGTCTAGATTTAAGAGGATAATCTTTATAATCATTAGAAGGGCTTATTAAATCCCAGCATTATCCAGGGCAAACTCTCTGGTGGACCTGAATACAAAAGATACCACAGGAGCGCTGGTGTTTGGATTGCTGTATGAAGGTGTCCGTCTCTCAGTGTTCCTTGATCTTGCCATGTTTCTGCATGCAGTTTTGCCACTGACTTGAATCGAGATGGGCAAGGGTGAGGGTCCCCGGACTCTGTCCCCTCATCTGCAGACTTGTCACATCTCCCCACCAGAAACAGGCTTCCTCAGGTCTCTCACCTGCGGCCAACTTCACTTTGTAAGACCCATGTTTTTAACTCTTCCCAGGGAAAATTCACGTCGCTGCAGAAGTAGACCAAGGCAGACCACCCACCCCTGCTGAAGTTCAGTTGGAGGGCCTGTGAAGGCACAAAGCTGGAGGCTGGGTCGTCTAAGGTCACTGCATTCTCCAACGCAGACGGGAATTTTACTCCAGAAGTCTAGGAAATGGTGCTATTGTGAGTTAGTTCTGACCCTTTGTCATTCTGAGTTTTCAGTGTTAAAATAGAAAGTATTGAGCAGGGGGGCTTTTGAGAGGCCATCAATCACTGCTTCTCTGTAAATTAAAATGTTACAGCACTCACACAGAGCATCTTAAGGTCACAGTTCCATACCTGTTTTGGGATGTTGTGTGGTGGAGGCTCGGGCTTATTCTATTCAGAGGTCAATTTAATGATACTAAAAGCTGTTGATTTTTTTTTTTTTTTTCTAGCCTTCAGAAGTTAGAAAAGAGACAGTTGAGTCCAAACTCCAATGTTAACAACCACATATATTTGAAAATCTATCCAGATTACAGATAAGTGCTTATTACTGGCCGTGGATACATACTAGTTAGCAAAATTGGGAGAGGCCCAGAAATGTTCTCACTCTCTCATGACAAAGGACTGGGCAGTAGTGTTGGGAAGGATGGGATGATTGTAAATGCATCTACCTTAATTTTGGGTCAATAGGTTGTAAGTCATGAATGGAAGGAGAAAGGAGACAGAATGAGAGGAAGAATCAGCATCTGTCCCATCATAGAATGGTAGAAGTTGAGTTTTCGATGAATAGTCAGAGTTGAATTTATACAACCAAAGCTCCCATGTGATTGTAATCTTGCCAAAATGTAATGGACATATAAATGAACCTGGGGTATAAGCAATAATATCCACTAGTGTTATCAGCTACTGTAACCAAGTGGCTGGTTCATTTGGTTGACGCTGATTATGGCCTTTAACTATGGTGGTTTGTTTTGTGTTTTGTTTTTTATTTCACAAAAAGCCAATAAAATTGTTTAGCTATAAAATGCCT EMBV3_22060 TCTTTGTTGTCTCCCTTCTCCCACCTGGGAAATGAAACTTTCAGGCTGGGCCACGGAGGC Gene BVT0102_303870 + 0 NULL GK000018.2:51507407-51529082 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13979 TGCACCCTATCGCCATCTTCATCCGCCCCCGCTCCCTGGAGAATGTTCTAGAGATTAATA Gene GeneID:100137840|DLG4:XM_002695782:289_cdna Constitutive 0 NULL GeneID:100137840 19 GENE DLG4 LLGL1 discs, large homolog 4 (Drosophila) EMBV3_01055 TCCTTTTGTGGAGTCCAGGGTGGCAAAGCTTGAAGATGAGCCTGAGCCAGCCTGTGCATA Gene GeneID:515809|GALNS:XM_002694764:536_cdna Constitutive 0 NULL GeneID:515809 18 GENE GALNS NULL galactosamine (N-acetyl)-6-sulfate sulfatase EMBV3_32378 GCAAATTAATGCAGCTACTAGAGTGAAAAATAACCTCCTTCCTCAATGAAAAGATCAAGC Gene BVV0102_259816 + 0 NULL GK000003.2:47758414-48398157 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39348 CACAGTGCATGGTTCCTTATTCCCGTGGTGTTCCCTCGATGCAGACTATGTAGGAAGATG Gene GeneID:407187|BSP1:NM_001001145:100_cdna Constitutive 0 NULL GeneID:407187 18 GENE BSP1 PDC-109 PDC109 SVSP109 binder of sperm 1 EMBV3_20435 CTGCCTCCCAGGACCAGCTGAGCGGTTTGATATTTTAGGAAGAAAGACAGACAAGTAGAC Gene BVV0102_301712 + 0 NULL GK000022.2:2978688-3053658 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38971 GCCTTCACCTTCATTCTGACCTTTTACGAGCCCAACAAAATGCCTGCCGATGAAATGTGG Gene GeneID:617718|OTOA:XM_002698021:208_cdna Constitutive 0 NULL GeneID:617718 25 GENE OTOA NULL otoancorin EMBV3_05643 CTTTTTCTGGAGTGGGTCATGGTGGCCTGGAATAACATCTCGAGCGAGTCCATCGTCCAA Gene GeneID:539790|POGK:NM_001099100:35_cdna UTR3_Alt 2 NULL GeneID:539790 3 GENE POGK MGC151637 pogo transposable element with KRAB domain EMBV3_02188 ACTATTTGGCCTTGCGAAGTCGTTCTGGCCGCTCCATCATCAATGGGAACTGGGCAATTG Gene GeneID:540939|THSD4:NM_001078030:246_cdna Constitutive 0 NULL GeneID:540939 10 GENE THSD4 NULL thrombospondin, type I, domain containing 4 EMBV3_23205 CAGTCTGAACTTGAGCTTATGGCCCCCCAGCACAGTGGTTACTGCAACAGGGACACAGTT Gene BVV0102_288518 - 1 EMBV3_36467 GK000022.2:50597463-50600551 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32669 TGAGGCTTTGATCTATGTGTGCTGCATCCTCATGCTGCTTCTGCCCTTCTCTGTCATCTC Gene GeneID:100299289|LOC100299289:XM_002689060:44_cdna Constitutive 0 NULL GeneID:100299289 7 GENE LOC100299289 NULL similar to olfactory receptor Olr1654 EMBV3_23787 GAAGCTGGCAGAAAGGATCAGCTTGATCAGGTACTATTTATAGACAACTGGCGTGTCCTA Variant GeneID:535630|TMLHE:NM_001076064:14_cdna 281^776 1 EMBV3_12658 GeneID:535630 X GENE TMLHE NULL trimethyllysine hydroxylase, epsilon EMBV3_43613 CGCCAAGGCCCTCGAGGGGTCGCCGCCGAGGCCGCCTGGGCTCCACTTCCAGTAACAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00081 TCAGGAGGATGAAGATGCCATCCTGGAGGAGCTGGACGCCATCACTCAGGAACAGATAGA Gene GeneID:510596|CHMP6:NM_001075457:72_cdna UTR3_Alt 3 NULL GeneID:510596 19 GENE CHMP6 MGC139458 chromatin modifying protein 6 EMBV3_26535 AGCCCCTCGCAGGAGAGGGCGCTGGCCCAGCACATGAAGTTCCGGAAGCAACAAGATCTG Variant GeneID:619125|LOC619125:XM_002694624:83_cdna 55^174 3 EMBV3_35784 GeneID:619125 17 GENE LOC619125 NULL similar to SEC14p-like protein TAP3 EMBV3_26831 AAGATGTGGGTGCAGAATGGTAGTCAGTGTATCGGCTGTTTACCCTCGTGGCAGACAGAC Gene BVV0102_235858 - 1 EMBV3_10474 GK000028.2:26104501-26253843 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40736 CCCCTCTTTTTTGAAAGCCAAAGGCCCATCCCTGACAGCTGGAAATAGCATGGGGAGGAA Gene GeneID:536833|ATXN7:XM_002696986:23_cdna Constitutive 0 NULL GeneID:536833 22 GENE ATXN7 NULL ataxin 7 EMBV3_01989 CACACGCAATCTGGTTTAGTCGTAACTGTGTAGTGGGCGGTGCGCTTATGCTGAGCTGTT Gene BVT0102_388893 + 0 NULL GK000019.2:49374923-49383812 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097501 TCONS_00097504 TCONS_00097505 TCONS_00097508 TCONS_00097511 TCONS_00097503 TCONS_00097500 TCONS_00097506 TCONS_00097502 TCONS_00097510 TCONS_00097509 TCONS_00097507 1 XLOC_058262 Coding TCONS_00097504 XLOC_058262 Coding Coding SMURF2 19:49381016-49430637 j TSS72232 5503 1 TCONS_00097504_6 506 19 0.889480048367594 1.40595274938444e-07 0.000634948655502509 0.000387939330173797 0.000440346952826266 0.000744046522509002 7.9606453403771e-05 0.000623432225307646 0.000945886581522998 0.000847299304240867 2.21586730368167e-08 3.39375146228886e-07 1.54632375881205e-08 0.000221548367506482 3.7460522307528e-08 0.000230317840676962 0.00034809748772464 1.51108772786601e-15 0.00292327999601329 0.000366848622180054 7.1291577218229e-11 1.97340673831074e-08 0.00115784008593764 0.000346915159640356 8.64222175005354e-06 2.77203436422703e-05 3.6807025268078e-09 1.98149181235177e-12 9.97015663791146e-09 6.04620262155201e-06 0.000404716397388504 XM_002696123.3 SMURF2 PREDICTED: Bos taurus SMAD specific E3 ubiquitin protein ligase 2 (SMURF2), mRNA. 0.0 9847 100.00 0.992004361257496 XM_005257585.1 SMURF2 PREDICTED: Homo sapiens SMAD specific E3 ubiquitin protein ligase 2 (SMURF2), transcript variant X1, mRNA. 0.0 5216 85.83 0.802834817372342 TCONS_00097504_6 sp|Q9HAU4|SMUF2_HUMAN SMUF2_HUMAN E3 ubiquitin-protein ligase SMURF2; 0.0 1027 99.21 0.99802371541502 2 coding 0 0 0 0 -0.259946357000694 0.0896631374170007 -0.147867474756644 0.0195750599767332 CATAGCACGATCGGAAGGATGCCATTAGAGGAGTGAACATGTACTCTGTGCAAAAAACTTGGTGAAAAAGGATTTTTTCCGGCTTCCTGATCCATTTGCTAAGGTGGTGGTTGATGGATCTGGGCAATGCCATTCTACAGATACTGTGAAGAATACACTCGATCCAAAATGGAATCAGCATTATGACCTGTATATTGGAAAGTCTGATTCAGTTACGATCAGTGTATGGAATCACAAGAAGATCCATAAAAAACAAGGTGCTGGATTTCTTGGTTGTGTTCGTCTTCTTTCCAATGCCATCAACCGCCTCAAAGACACTGGTTATCAGAGGTTGGATCTATGCAAACTTGGGCCAAATGACAATGATACAGTTAGAGGACAGATAGTAGTGAGCCTTCAGTCCAGAGACCGAATAGGCACAGGAGGACAAGTGGTGGACTGCAGTCGTTTGTTTGATAATGACTTACCAGATGGCTGGGAAGAAAGGCGAACTGCCTCTGGAAGAATCCAGTACCTAAACCACATAACAAGAACTACGCAGTGGGAACGCCCAACACGACCGGCATCTGAATATTCTAGTCCCGGCAGACCTCTTAGCTGCTTTGTTGATGAGAACACTCCAATTAGTGGAACAAATGGTGCAACGTGTGGACAGTCTTCAGATCCCAGACTGGCAGAGAGAAGAGTCAGGTCACAACGACATAGAAATTACATGAGCAGGACACATTTACATACTCCTCCAGACCTACCGGAAGGCTATGAACAGAGGACAACACAACAAGGTCAGGTGTATTTCTTACATACGCAGACTGGCGTGAGCACATGGCATGATCCAAGAGTGCCTAGGGATCTTAGCAACATCAATTGTGAAGAGCTTGGTCCGTTGCCTCCTGGATGGGAGATCCGGAATACAGCAACAGGCAGAGTTTATTTCGTTGACCATAACAACAGAACAACACAGTTTACAGATCCTCGGCTCTCTGCTAACTTGCATTTAGTTTTAAATCGGCAGAACCAATTGAAAGACCAGCAACAGCAGGTGGTGTCGTTGTGCCCTGATGACACAGAGTGTCTGACAGTCCCACGGTACAAGCGAGACCTAGTTCAGAAGCTAAAGATTCTGCGGCAGGAACTTTCTCAGCAACAGCCTCAGGCTGGCCATTGCCGCATTGAGGTTTCCAGAGAAGAGATTTTTGAGGAATCATATCGACAAGTCATGAAAATGAGACCAAAAGATCTCTGGAAGCGATTAATGATAAAATTTCGTGGAGAAGAAGGCCTTGACTATGGAGGGGTTGCCAGGGAGTGGTTATATCTCTTGTCACATGAAATGCTGAATCCTTATTATGGCCTCTTCCAGTATTCAAGAGATGATATCTATACATTGCAGATCAATCCTGATTCTGCAGTTAATCCGGAACATTTATCATACTTCCACTTTGTTGGACGAATAATGGGAATGGCTGTGTTTCATGGACATTATATTGATGGTGGTTTCACGTTGCCGTTCTATAAGCAGTTGCTTGGGAAGTCCATTACTTTGGATGACATGGAGTTAGTTGATCCAGATCTTCATAACAGTTTAGTGTGGATACTCGAGAATGATACCACAGGTGTTTTGGACCACACCTTCTGTGTCGAACATAATGCCTATGGTGAAATCATTCAGCATGAACTTAAACCAAATGGCAAGAGCATCCCTGTTACTGAAGAAAATAAAAAAGAATATGTCAGGCTTTACGTGAACTGGAGATTTTTACGAGGCATTGAGGCGCAATTCCTGGCCCTGCAGAAAGGATTTAATGAAGTAATTCCACAGCATCTGCTGAAGACATTTGATGAGAAGGAGTTAGAGCTCATTATTTGTGGACTTGGAAAGATAGATGTTAATGACTGGAAGGTAAACACCCGGTTAAAACACTGTACTCCAGACAGCAATGTTGTCAAGTGGTTCTGGAAGGCTGTGGAGTTCTTTGATGAAGAGCGACGAGCACGGTTGCTTCAGTTTGTGACCGGCTCATCCCGAGTGCCTCTGCAGGGCTTCAAGGCTTTACAAGGTGCCGCAGGTCCACGGCTTTTCACCATACACCAGATCGATGCTTGCACTAACAACCTGCCCAAAGCCCACACTTGCTTCAATCGAATAGACATTCCGCCCTATGAAAGCTATGAAAAGTTATATGAAAAGCTGCTAACAGCCATCGAAGAAACGTGTGGATTTGCTGTGGAATGACAACTTCAAGGATTTACCCAGGACTCTATTTATAGCCTGAGGGACAGACAGCCTCCTTTCAGCAGAGTTTCAAGAAATGCTGAAATACAGGAAAGCGCCCCCCCCCCCAACCCCCCTTTAAAACATTTTAGGACACTGTGAGGGGAAGGACAATTTTGAAATTCCTTTTCAAGGAAAAAAAAGAGGTCTTTGTGCTTTGCCATGAGGCCACATTCAGCTGCTATTTAAAATTAATATCTTGAACCTAAAGAATGCTGACTTTTCCTACATTTCCAGAGTTAGGCAGTATTCTACACTTAAAGACTACTACTATTTTTATAAAAGGTAATCTATTCAAATCACTTCACAGATTTCAAGTCTATCAAACATCAAGACAACTTCAGCAGTCGGTACAAGTCACATTTCATTTTGAATACATGATTTTGAACAGCTCCTGTACTTGCTCTTTGTAAAAAATAAAATAAAATAAAATTATTTTGAATTATTCTACCTTTGTAAACAATTGGCTACAAAAGAATCTTTAAAAAAAATTAAGCCATTTACACGTTTAATTGCATTTTTCTATAGCAAAGCATTATATTTTAGAAGCATTATATGTTTCAACCTAGCCTAATTGAGTCTTTTTTATATTTTTCAAGCACGAATTCTCTGGAATACAGCTATATAATTTTGGTTGTCAAGTTCCTAATGCAACCATTTAGTCTGAACTTAGTAGCTTATTTGCTACAATAAAATGATGCATTCAGGGGCTCCCTGTTCTTTAAGAGACTTTAAAACAGAAACCTTAATTTTTTATCTTGAATGAGTATGATCAGGTATTTTGGATTTACTTTGCATCTTAAATGGAAATACTGCATTTTTATAGCTACTCAGATCACATGGATGAGATGGGATTTTCATTCTGTTACTGGGTCAGCTTATCTTTGATATATATATATATATATATACTATTTCTGTAAACCAAAGTCTCCTATGACAAGTGCACCTAATTCATATTATATTTTAATTATGGTAAGTTTCTATCAAGTAAACCATCCTGAATCTGTTTAGCTGCTCATATCTTAATCAGTTAAAATTATGAAAAAGGAAAAACTCTGCTCGAAAGATTATTTAGCAAAGCTTAGAAAACTCTTTTACCTAACAAAATGAAGTGGGGGTGGTGGGGCAGGAGATGTCATTACTAAAAACAAAAAACAAAAAGTGGTTCTAACTCTCATACAGTCAGTCTGAAGAGTAATTTTGGAGGTAAGGGAATCTTGGTTCCCTTGGTGTTGAAGATGAGCATTTGATTTTGAAACATCCAGACTCAGCTTTCAAGGTGCGTGGCATGTTGCATGATCCAGAGGGCAACCAGAATTCTGGAGTGAGAGCCTGGAAAAATCTGAAGTCGTGAGTGGTTTTTTAAATTCAGCCGTCAGAAATCTGCACTATTTTTTTTATTTTTTACATTGATGTAAAATCAAGCATAGCAAATTTTGATGACAGCTTTGTTTAAATTTTGCAGCTTAATTATCAAGTGAATCAGCCCTTTGTGTTCTTTGATTTGATGGACTGGTCTCAGCCTGTGTTCTTGGAGACAAGGGCTTCCTCAGAGGTGCCTCAGAAGTCATGGTTAAGAGAGGAGGGACAAAGAGAGGGCGGAGAAAGGCCAAGTTGGTATTTGAGCAGAGGCCTCGAACTCCCCACCCCCTTTTACCCAGAACAGCTCTGATTTTTCTTTTATATATATATATATATATATAGGAATTTCACATAAGGTTTCAGAGACTAGGAGGGGTGGGGGGATGGGTAGAATACAAGAGGTGGAAAACTTGCTGCTTAAAAAAAAGTTGAGAACTACTCCTGCAGCTTCTATGTATTTATTTCATTCAGCCGGATTCGACAGCCACACGCAATCTGGTTTAGTCGTAACTGTGTAGTGGGCGATGCGCTTATGCTGAGCTGTTTCTTCCTGCTTTGTTTTCTTACTGCATTCTTAGTTGTACCGGAGAACATCTTGAAATGCCCTGTTTGATTATCAGTAGTTTTCGGCTTTCACAATAATACCTTATTGGTTGCAGGTCCATCTTTTAAATTAAAGCACTGCGCAGTGCAATTGTGCCTATTATCTTTCAGTAAAAGTGAGTGCATGATGAACACTTCAGAGAAACTGTAACTGACAGATGAAGTACTAATGAAATGCTACTCTCAAAATTGAGCAGGCAAATACCATCGCTTTTTGAGTGCCTTTTTAACTTTATGACTTAATAGAGCTTTAAAAGAAACAAACTCCCCTCCCTTACAGTCTATGGTATCACCAACATAATTTATAAAAACATGATTAGATTTCATTCTCAAAGTCACGTTACCTGCTTACTTCTAAACAGGTGCTAAGCAAACAAAACCCCCACCGAATCACTGAACCTTGGACTTGCACCTCATGTTTAATGTGAATATTTATTTCCACATGTCCCTCTTAGCTGGGTTTTTCCTAATCCTTCCTCTAGTTGTGTTATTCCAGATACGTGATGTCGTGTTTCCATACATTGCCTCTGCATCATGAATGCTTAATTATGAACAGTGGTTACTTTGTAGAGCACATATGCAGTACAGAGGTGAGTTTGTTTCAGAGGGTCTTACTTCTTTGGTTGTAAAGAGTTTTTAAATAGTGCTGTGTATAGTGTACATTTTGTTTTTGCACATAGTTTGTTGCCCTGAATGGGTTTTATTTTTAATCAAGTCTTTTATTTTTCCCTTGTAATTACAGTCCAGAGCACAAGTTTCCCTTCTTTTAAATACAGTGTAATTTGCTTTATTTTATAACACTAAGTTGGCTTGAACTTCCGGTGCGTTGAGCTGGCTGCATTGATGGGAGTCTGAGCTTGTCCCAGACGTCCTGACAGTTTGCTAGAGCAGCTCCTCCTGCTTGTCTTCAGGCTGCAGCAGTCAATGGCTGCCGTTTGTGGTATTTAATGTACTTACGTTAGAATGATGGTTGTACCAAATGCTGAGTTGTTCTGTTTCTAGATGTAATTAGTTCACTTATTGTAATATTCTTCTCTCAAACTGACTTTAAAAACAAAGTTTTATCATTTTCATTGTATGTGTATTTATTACAGAGTGTTTTAGCTTTGATATTCTTTGTATTTTCACTCAGTTGTTACATGAGCTTTATCAATAACATCTGTATAAATGGTTTTTAAAAATTAACTATGTATGTGTCCATGCCGAAGTTGAGCAATAAATGAATGCTGTTTGCACTGTCACAGCATCAAAGTTTTTAAAGAATAT EMBV3_25561 GCCTAAGGCCTGACAGAGAGTCCACAACTAGGTTTACAGAGTACTGTACCAGTGGAGACA Gene GeneID:787966|SLC9A11:XM_002694094:366_cdna Constitutive 0 NULL GeneID:787966 16 GENE SLC9A11 NULL solute carrier family 9, member 11 EMBV3_19130 TGAGAGGCTGCCATACTCCTAGTCAACTAATAAGTCACTGGACGATGGCCGGGTGGTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34227 TAAGAAAGGATTAAAAATACACTCCTGCTGTGCCCCCCTTCCTCCCTTGCAACTCCTGCC Gene GeneID:280682|CS:NM_001044721:884_cdna UTR3_Alt 3 NULL GeneID:280682 5 GENE CS MGC137617 citrate synthase EMBV3_37684 AGTCAAAACCTGGCTAAGTGTAGCCAGTGGGACTGTTACCTGTATTGTTAATTCTGTGCC Gene GeneID:524334|L3MBTL3:NM_001076871:15_cdna Constitutive 0 NULL GeneID:524334 9 GENE L3MBTL3 MGC143141 l(3)mbt-like 3 (Drosophila) EMBV3_18928 CAGTCCTTGAATTCTAGAACTATGGCCCACATTTGGAATCACCATATGAGACCAAGAGTT Variant GeneID:516156|ZNF331:NM_001103251:56_cdna 207^342 1 EMBV3_33373 GeneID:516156 18 GENE ZNF331 MGC151505 zinc finger protein 331 EMBV3_37967 CAGCATCCTGCTAGACTCGTTAAGTTTTTAGTGGGCATGAAAGGCAAGGATGAAGCCATG Gene GeneID:767587|CCAR1:NM_001076532:411_cdna Constitutive 0 NULL GeneID:767587 28 GENE CCAR1 CARP-1 cell division cycle and apoptosis regulator 1 EMBV3_04813 CCTGGGGCAGGAGCTGTTGACACAAGCAGTAAAGTGTTCTTTGTCTCTGAACTTTGCAGC Gene GeneID:504226|URGCP:NM_001015513:32_cdna Constitutive 0 NULL GeneID:504226 22 GENE URGCP URG4 upregulator of cell proliferation EMBV3_19922 CTCCGATTCTGTGGCATGGATCCCGAGCAACGGAAGTGGCAGAAATATTGCAAGCCCTCT Gene GeneID:532898|TNS4:NM_001038155:160_cdna UTR3_Alt 2 NULL GeneID:532898 19 GENE TNS4 MGC126986 tensin 4 EMBV3_38860 GTTGGACACCATGTTGAATTATCCCCCCATCGGTTGTGAAGAACTGTGCTACATTCAGGC Gene GeneID:767999|WDR26:NM_001077059:122_cdna Constitutive 1 NULL GeneID:767999 16 GENE WDR26 MGC134185 WD repeat domain 26 EMBV3_10542 TCCTCCTTACCTTGATGACTATGGGGAGACTGACCAGGGACTCAGACGGGGAAATCCTTT Gene GeneID:527153|UBR2:XM_002697240:424_cdna Constitutive 0 NULL GeneID:527153 23 GENE UBR2 NULL ubiquitin protein ligase E3 component n-recognin 2 EMBV3_23720 ATCACGCGGGCTGGAATCAAGAGACTCAGGACCCATTTACCCAATATTAAAGTCCACGCC Gene GeneID:511007|FBXL20:NM_001035096:85_cdna Constitutive 0 NULL GeneID:511007 19 GENE FBXL20 FBXL2 F-box and leucine-rich repeat protein 20 EMBV3_26145 CCCAGGTGTGTGATCAGTTCTTGCACAATTCTCTGATTGGCTGATAGTGAGGTAACAGGG Gene BVV0102_074181 + 0 NULL GK000001.2:153873872-153874778 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002731 TCONS_00002730 TCONS_00002733 TCONS_00002732 1 XLOC_000671 NonCoding TCONS_00002730 XLOC_000671 NonCoding NonCoding LOC100336592 1:153866537-153877145 x TSS1389 2427 2 TCONS_00002730_4 82 0.606098063452822 3 0.771471669652117 0.0611487243245327 0.0502538830271713 0.0527547898070212 0.0368492283710726 0.0322172758216705 0.0142054195938841 0.0175557541284308 0.0215306989466829 0.0213586723605651 0.00873430114168627 0.00223814382476092 0.00411327457547508 0.0081309291791118 0.0175353469613949 0.00644624922919433 0.00111999174560719 3.39608014420313e-09 1.36857556214997e-08 0.0357305547403215 0.0507316379184255 0.0206232340196208 0.00133309154714693 1.04600052050631e-09 3.48037160925614e-09 0.0363505466208534 0.0329787014044357 0.0279788319713554 0.000780658904566085 0.000658803217767628 0.000362051678450097 XR_139113.2 LOC100849044 PREDICTED: Bos taurus uncharacterized LOC100849044 (LOC100849044), 7e-77 293 92.57 0.0824062628759786 NM_001242318.2 PDE7A Homo sapiens phosphodiesterase 7A (PDE7A), transcript variant 3, 8e-07 60.8 77.65 0.0341985990935311 0 noncoding 0 0 0 0 -0.408937546168306 0.024536766094625 -0.0179097880088806 0.825107242326088 GACAGGAACCTGGAGGTGTTTGACTTTACTCCCTCCCCTTTCAGTATAAAAGAAGCCAGAATTCTAATTCAGGCAAGACAGTTCTTTGGGACGTGAGGCCACAGTCTTCTCTGTCTGCCAGCTATCCAAATAAAGTTGCTATTCCTCGCCCCAACAGCTCATCTGTCAATTTATGGGCCTGTCAAGAGGTAAATTTTGAAAATATACAGCATCCACGAGTCTGGCAGACTGCATTTTCCAAAGATGGCCACAAGGAAACCTCCACACTCCTCTGCTCTGTGGCCCTTCACCCCCACATCAAGAGGAGGAGTCTAATCCCCCAACCCCGTCTGGAATCTGGTCTGGATTTAGTGACACCCTCGCAGCCAACAGAACGTGGCCAGCAAGCTTCAGCCCCGGCTGCTGCATGGCCCCTCCCTGTGAGACTCTGCAGCCTTGCCACTCCACCTCAGCCTGCCCTTCTGCCTCCCAGCCCCTCCAGAGATGGAGAGGAAGCCACCTCAGCATCGGTCCTCCAGTCCCAGGCTTGAGCACAGGCAGCAAGTGAACGAGGGGCAGAGGGAAGCGGGAGAGACCACAGAAACCCAGCAAACAGCAGGAAACAGTTCCTTTTTCAGTTTCCCCACCCAGCATCCCAGAGGGTGACTGCTGTTTTGTACCACCATGGGTGTTCTTGCTGTTGTTGTTGTTGGGGTTGGGGGCAGGGGGAAATAGATACATGAAACAGTTGGCTACTTGTCTTCCTGTAATAGGGAAGAACAAATCTGACTCCACGTTGGATGGGTTTCTTTTACTTTAATTGTAACCAAGCAGGACCCTACTGGGGATGGATCCCTCCCCCATACCCTCTGTTGTAGCTCCTCTCTACAGTACCTAGATAATGGTATTTGATCATATTTACCGAGTTCTCAAGATGCTAAAACCACCACCAAATGGAAGAAATTAACTACTAGATGCTCATGAGCACGTAGCCCCTAGACCTACTGGTGCCTAAGCATTGATATTGTTAACCTAACAGCCCTGTTACCTCACTATCAGCCAATCAGAGAATTGTGCAAGAACTGATCACACACCTGGGATGACCCTCCCCTCTCTGGCCTTTTAAACCACTTCGCTGAAACACACCCCCTCAGAGAGTTCAGGTTTGCGGGGACCATCTGCCCATTCTTCCTGCTTAACCTGAAATGAACCTTTCTGTGCTCCAACTTCAATGCAGTGTCTGGTTGCTAAGCATGGGCACACAGACTTGGGTTCAGTAACATAACCTTCACATTCTGTGGCTTTTGCTGCAAGTTAATCACCAAAGGGATGTTGCCTAGAGCGTAAAGTACACGTAATGGCCCGTCTCAGTTAACCCTGCCTCCTGTTCCTGTGTTAAGCCAAAATACCTTTGTTTAGCTCAAAGGAAACATCCTGACCAGGCCCACCCACGAATGGATGCAGGAAAGAGAAAATTAACACGACCCCTCCAATCTGGCTTGCAACAGTATACACCTCTTTTCCTTCACCTCGTCACTTGCCCCTCTCCGCCCATAAAAAGAAACGGCACTCAAACCTGGGCAAGATGGTTCTGTGGGACACTAATCCACTCTCTCAGTCTGCTGGCTTTCCAAATAAAAGTTGCTGTCTCTTGGCCAAACACCTGTCTCTCAGTGGATTGACCTGTCTTGAGATGAGCAGTAGGAACTTGGATTCGGAGAGACTTGTACACTTTGAACATGAACTTACAAATTCTGGACACATTCTGAAACCTGTCCGCCTGCAAGTGGTGCTTCTGCTGTTAGGCAGAAGTCTGACCTTAAGTCCAGTCTGACCTGCTTTGCAGGGAAGCAACTTTAAAAGCCATTCAGAGAACTACATGGTTAGAAGTCACCTCTCCAGTGAGAAATGGAAAGAAGACAAGCACTGCTGAGCTATGCTGTCACATGGTGGCTACTGATTGCTTGAAACATGTCTGGTTCCTTTGAGATATGATCTAAGTACAAAATACACACTGGATTTCAAAGGATAACCAGGTAACCCATCAGAACCCCTCTCTCCCTGAGGAAAAAAGAAGTCAAAACAAATAACATGGACTTCAAATCCTGCATTTCTCAAATCTACATGAAATAAACATTGTTTCTGATAGACACCCTTGTCTCACTGAGTTGACATTTTATTGATAATCTACTAAATGTCAAGCATAATGCACAGAGACATATAGAAACAAATACTCTTGGCCTGTCTTAAAGTGAAACAGCTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGGAGAGGAGCACGTCAAGGCTCTATATTGTCCCCCTGCTTGTTTAACTTATATGCAGAGTACATCATGAGAAACGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGATTGCCGGGAGAATATCAATAACCTCAGATATGCAGATGACA TCONS_00005727 r 5' 0 TCONS_00005724 TCONS_00005725 TCONS_00005726 TCONS_00005727 r 5' 4631 EMBV3_37397 GACGACAGGAAGTGGTTCGAGACCTGGGATGAGAACACTGCGGGGACTTTTTCTAACTCA Gene GeneID:100336677|LOC100336677:XM_002698124:427_cdna Constitutive 0 NULL GeneID:100336677 25 GENE LOC100336677 NULL intestinal mucin-like EMBV3_22646 GCCTGTCAAAATGGCTAGCATGCAAAAAACTCCACAAATAACAAACGCTGGGGAGAATGG Gene BVV0102_129297 + 0 NULL GK000030.2:142965994-143018513 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26242 TCTCCCATGTGCTCGCTGTTCAGTGGTGTATATTTCTTCTCCCAGACGTGGGGCATGTGC Gene GeneID:616005|RNF220:NM_001076941:307_cdna Constitutive 0 NULL GeneID:616005 3 GENE RNF220 C1orf164 C3H1orf164 MGC142464 MGC155018 ring finger protein 220 EMBV3_21523 GGCGACCCGTAGACAAGATGTGAGGTTGAGTTCCTTGGTGTCTCTTGCTGGTTCTGTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43495 CATTGTGAACGATACCAGTGAAGACATTGAAGAGCTGGTGGAACCCGTGGGAGCACATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35679 CCTGTCCCCTTCCCTCCTGTCTTGGTCTCACTCTGTTGTGGAAACTTCTCAATACCGTAA Gene BVT0102_164108 - 1 EMBV3_10253 GK000018.2:52293314-52303107 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21206 GGGGAAGGAAATAGCCACCCAAGTCCAAGAAACCCAGAAAGTCCCAAACAGCATAAACCC Gene BVT0102_069154 + 0 NULL GK000010.2:28284035-28310475 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00208613 TCONS_00020011 TCONS_00022579 TCONS_00251214 TCONS_00214738 TCONS_00249013 TCONS_00008117 TCONS_00229318 TCONS_00197112 TCONS_00252957 TCONS_00022065 TCONS_00251754 TCONS_00071433 TCONS_00032588 TCONS_00249292 TCONS_00161090 TCONS_00251452 TCONS_00253720 TCONS_00135548 TCONS_00222057 TCONS_00056147 TCONS_00021194 TCONS_00187583 TCONS_00189353 TCONS_00078583 TCONS_00229354 TCONS_00152647 TCONS_00175849 TCONS_00224114 TCONS_00230725 TCONS_00148670 TCONS_00062742 TCONS_00255185 TCONS_00165812 TCONS_00037883 TCONS_00232966 TCONS_00245928 38 XLOC_131641 XLOC_127126 XLOC_010689 XLOC_013249 XLOC_154157 XLOC_130757 XLOC_151956 XLOC_003677 XLOC_138813 XLOC_118775 XLOC_155898 XLOC_012736 XLOC_154695 XLOC_043204 XLOC_018828 XLOC_152235 XLOC_097982 XLOC_154393 XLOC_156659 XLOC_081771 XLOC_135366 XLOC_033950 XLOC_011867 XLOC_113628 XLOC_115392 XLOC_047471 XLOC_138849 XLOC_092412 XLOC_105628 XLOC_137410 XLOC_140215 XLOC_090550 XLOC_037469 XLOC_158117 XLOC_100652 XLOC_021712 XLOC_142448 XLOC_150855 Coding TCONS_00229354 XLOC_138849 NonCoding NonCoding - 8:2557529-2558613 - TSS170858 1084 1 TCONS_00229354_2 118 0.997232472324723 1 0 2.51027591171023e-06 0 2.13423121305016e-06 0 0 0 1.84450574633871e-06 0 0 6.46362951175192e-05 3.99413746252622e-05 1.55532181485613e-05 1.35645042964244e-05 0.00014489275163546 5.78133364332646e-06 0.002164817523245 0.00318171808389475 0.00462562329167112 0 3.31707035394452e-06 0 0.00320644011591593 0.00184796150768437 0.00222080368255703 0 6.49950411920376e-07 0 0.000293836862500732 0.00101979446118106 0.000306281287184322 XR_229156.1 LOC101907943 PREDICTED: Bos taurus uncharacterized LOC101907943 (LOC101907943), 2e-79 300 80.47 0.310885608856089 0 noncoding 0 0 0 0 0.044186773713356 0.68151882467206 -0.00421894400467007 0.937197478317913 GGGGTGTTTCACCTTGGGTTTATCCTGTCTGGGACTCTCTGGGTTTCTTGGACTTGGGTGGCTATTTCCTTCCCCATTTTAGGAAAGTTTTCAACTATTATCTCCTAAAGTATTTTCTCATGCCCTTTGTTTTTGTCTTCTTATTCTGGGACTCCTATGATTCAAACATTGGGGCCTTTAACATTGTCCCAGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCCTTTTTCTTCTTTCCTCTCTGCTTCACTTACTTTCATCATTCTATCTTTCACATCACTTATCCTATCTTCTGCCTCAGTTATTCTACTATTGGTTCTGAAAGGTTGTTGTTGAATCACGCGAAGACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGCGGCAGAAAGAGTACCCGCCTGCTAGTCTTCAGCTGGATGTTATATAGTCACTAGTAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGAATGGCACCAGGCCCCTCACTCATAAGATGCATTTTGGGATAGTCTTGGCGCCAAATGGTTTATCCTGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGACAGATCACCATACAAATAGTTTCATTTACATAGATTAGGAGAACAATATCCATACTGGTTTGTCAAGTAGGTTCTGGGCCAAGAGGCGGAACCAACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAAAAAGGCATTGGTTATCTCTAGGCTCAAGAATAGCTAACTTCAGGCGAAACCAGGTGTCATTATGGCCACACAGTATTTTAAGAGAAACCTCCCTTTAAATTTGTATAGAGAAGGAAAAAATATTGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGGCTATTTCCTCCATTTGGAGACCCCTGGCCTTCCTGCCTGTTACCCTCTCA TCONS_00226773 . 5' 692321 TCONS_00226773 . 5' 692321 EMBV3_26709 CGAGTTCCTGGACCACATCAGGAAGGTGATGCTGGTGATCGATGCTGCGGTGACCAATGT Gene GeneID:414920|NGB:NM_001001853:82_cdna Constitutive 0 NULL GeneID:414920 10 GENE NGB NULL neuroglobin EMBV3_28731 GGGCGCGGGTGGCTTTGGCTCGGTGTACGAGGCCTACCACCTCCGGCCCGCCCTCCGGGC Variant GeneID:444869|MOS:XM_002692654:78_cdna 364^981 3 EMBV3_23098 GeneID:444869 14 GENE MOS C-MOS v-mos Moloney murine sarcoma viral oncogene homolog EMBV3_41475 CAGCCATCCAACAAGTGCACGGCTGTCCACAGTCCTGTGATGTCCAGCCTAAACACTTCT Gene GeneID:613433|SYNPR:NM_001046506:8_cdna UTR3_Alt 3 NULL GeneID:613433 22 GENE SYNPR MGC139775 synaptoporin EMBV3_26539 TTCTGGATGGTGGGGGAGCTGGGGGCAAGGCGGAGCTAAAGACATGAAAACAGAGATTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13497 AAGAGCAGGTGGCGGAGTTCAAGGAGGCCTTCGACAGGTTCGACAAGAACAAGGATGGCA Gene GeneID:520404|CALML5:NM_001098049:41_cdna Constitutive 1 NULL GeneID:520404 13 GENE CALML5 NULL calmodulin-like 5 EMBV3_16656 TGGCAGGCATGTGTGTCTGCACTCGCTCTTTGCCACTATTTTGCCCTGCTCCATGCCAGA Gene BVT0102_075870 + 0 NULL GK000022.2:51049410-51052511 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127183 TCONS_00127186 TCONS_00127184 TCONS_00127185 1 XLOC_077592 Coding TCONS_00127186 XLOC_077592 Coding Coding IP6K1 22:51017780-51052294 j TSS95183 4554 1 TCONS_00127186_4 441 0.0116381203337725 6 0.868223567930925 0.000695771465582718 9.21932432140049e-06 0.000208659988991549 0.000342158809886572 0.000451011707012361 8.3960392584797e-05 6.91096313957676e-09 0.000511828454911079 0.000131591202679241 3.01441187568854e-12 7.25244545875354e-05 1.61291831941e-05 0.000269775573840747 2.03905748599746e-10 0.000147528357682399 1.26739358913846e-09 0.000191050617861837 1.61401377983642e-06 7.54808624854207e-05 0.000263212680131316 0.000240896079285694 0.000138607869839833 0.00111932385765603 6.57374126619451e-09 0.000271950150121372 0.000403277882293558 6.87057424014904e-07 7.25455706133371e-05 4.82275795987389e-11 2.55730166266129e-05 XM_005222860.1 IP6K1 PREDICTED: Bos taurus inositol hexakisphosphate kinase 1 (IP6K1), 0.0 7863 100.00 0.957180500658761 NM_153273.3 IP6K1 Homo sapiens inositol hexakisphosphate kinase 1 (IP6K1), transcript 0.0 4183 81.69 0.956521739130435 TCONS_00127186_4 sp|Q92551|IP6K1_HUMAN IP6K1_HUMAN Inositol hexakisphosphate kinase 1; 0.0 858 96.15 0.997732426303855 1 coding 0 0 1 0 -0.300458496645013 0.2312432263192 0.030347275473303 0.531412939604191 AATCTGCGTTTCAGAAATGGCTGTGTGGCTCATCCCTCTTCCTGGCTACTTTTGACTCTCAGAAAACATGTATTGGGAGAGAAGAATAAGCTGAGCAGATTCTGACCGTTGGTTTTCAGCCTGCCAGGACCTTCTGCGTAGCTCTCCTTCGTGGCTCATGTGCTACATCCTCTGGCCTCAGTGTGCAACTGGCCCCCAACGCAATGTGTGTTTGTCAAACCATGGAAGTGGGGCAGTATGGCAAGAACGCAAGTCGGGCCGGAGACCGGGGAGTCCTCCTGGAGCCCTTCATCCACCAGGTGGGCGGACACAGCAGCATGATGCGCTACGACGACCACACTGTGTGCAAGCCCCTCATCTCCCGGGAGCAGCGCTTCTACGAGTCCCTCCCTCCCGAAATGAAGGAGTTCACCCCTGAGTACAAAGGAGTGGTATCCGTCTGTTTCGAGGGGGACAGTGACGGTTACATCAACTTGGTGGCCTACCCGTACGTGGAAAGTGAGACCGTGGAGCCGGATGACACACCGGAGCGGGAGCAGCCTCGGCGCAAGCACTCCCGCCGGAGCCTGCACCGGTCGGGCAGTGGCAGTGACCACAAGGAGGAGAAAGCCAGCCTGCCCCTCGAAACCTCAGAGAGCCCCCAAGAGGCAAAGAGTCCAAAGGTGGAGCTACACAGCCACTCGGACGTCCCTTTCCAGATGCTAGATGGCAACAGTGGTCTGAGTTCTGAGAAGATCAGCCACAACCCTTGGAGCCTGCGCTGTCACAAGCAGCAGCTGAGCCGCATGCGCTCCGAGTCCAAGGACCGAAAGCTCTACAAGTTCCTCCTGCTTGAGAACGTGGTGCACCACTTCAAGTACCCCTGCGTGCTGGACCTGAAGATGGGCACCCGGCAGCATGGCGATGACGCATCCGCCGAGAAGGCTGCGCGGCAGATGCGGAAGTGCGAGCAGAGTACGTCGGCCACGCTGGGCGTCAGGGTCTGTGGCATGCAGGTGTACCAGCTGGACACGGGGCATTACCTCTGCAGGAACAAGTACTACGGCCGTGGGCTCTCCATCGAAGGCTTCCGCAACGCCCTCTATCAGTACCTGCACAACGGCCTGGACCTGCGGCGTGACCTTTTTGAGCCCATCCTGAGCAAACTGCGGGGCCTGAAGGCCGTGCTGGAGCGGCAGGCCTCCTACCGCTTCTACTCTAGCTCCCTGCTTGTCATCTATGACGGCAAGGAGTGCCGGTCTGAGTCCTACCTGGACCGCAGGTCTGAAATGCGTATGAAGCACCTGGACACCAGCCTCCCGGAGGTGGCCCCGCCCTGTAGCCCTAGCACCAGCCTCAGCAGCACCAGCCCGGAGGCGGGCCCCTTCTCTCCGCCCAAGGTGGACGTCCGCATGATCGACTTTGCACACAGCACGTTCAAGGGCTTCCGAGATGACCCCACAGTGCATGACGGGCCCGACCGAGGCTATGTTTTCGGCCTGGAGAACCTCATCAGCATCATGGAACAGATGCGGGACGAGAACCAGTAGGCCCAGCTCGGGGCCCCCCAGACCCCTTTCCTCTCCACCCGCAGGCAGGGACCATTGCTCTCAACTCGCCGTGAGGACACACAGACTTGCTTTTAAAGGGTTATATTTCTCTTTAGTGTAAACTAAAAGAAATGTTTTTAGCTGTAGCCTGGAATCCATATATATAAAGTGACGGAGGGCAGAACACGTCCTCTTAGCCAGGCTGCCTAGCTCGACGGCTCTGACTGCTGTGTCCAGGTGGACTTAGGAAGGAAGAGGTGCCCCTGGTGGGCCTGGCAGCGGGGACAGGTTGCCCTTGGACTTTGGTTTCTCTTGCCCAGGTCTTTGGGGCTGTGACTGCAGGGTCCTGCTAGTAGCAGGGTGAAGCCCTGGGTTGGCGCAGGGCCCTTCCATGTTCATTCACCCCTGGCTCCTCAGTCACAGAGGGTTGGGTGCCCATCTCTTGGGGGACTTTGTAACCTGTGCTGTGGGTATTACCCATTTCTTTGACAGGTGTTCCCAGGGCACCAAGGGGCCAACTGTATACAGCTGGACCCTTCCTGGTTCTGACCTTGGCATGAGGCTAGATTGATGAAGCTGTGCTGAAGCCAGCTATGGCGGAGGGCAGGCTCTGGGATCCCCAGGCACTGTTTGGCACTTGAACCTGCTCCTGCCTGCACACCCCAGCCAGCCTTTCTCACCAAGATCCCTTGCCTAAGGAGGCCATCCCCTCTTGCCCCACTGGAGGGGACCGTGCTCTGTGTGCTGAGGAGAGTCAGCCTCCCAGCAGGCTTTGGGGCCTCTGATGGCTCTGACCCAGACAGTATTTGCAGCCCCTGGGCTGTGGGTAGGAATCCGCTTCCTCTGGCTTCTTGGGCAGCTCTGCTGCCTCGGAGAGACTGCTCCTTCCAGGGCTCAAAGGCTGTGGTCCGCTCAGGGTCTCACCTCTCCCCAGGCCAAGCTCAAGGCAGCAGCCCACTGTGAGGAGCTCCAGGCTTGTGAGGGAGAACTTTAGGCTTGTTTGCTTTTGAGGACATTGGGCGCTGGGTGCAGATGCCCAGATTCTGCTAACGAGAGTTTTGTCTTACCAGTACTGGGGTCCATCCGTCTGTCCATTCATCCATGTGCCAGCCCCTGTGATCTTTCCCCCTGGGGTGTAGCCTTGTTCAGTAGTGAGTATTGATTTCCCTCATGCTTCCCTCAGCAGAATATCCTCTTCCCCATTTCTGAGGTGAGCTTTTGCCCCTGTGCCCTTCCTCAGCAGGTGCTACCTTTTAAAAGTGGTAGCAGAATGAGTCGGAGGAGGTGTTTCCCTGCTGGCCCAGCACCGTCTCTGTGAGCCTGCGGCGTGGCCCCCTCGGCACTCAGCACCGACGGTGCCACAGCGAAGACCTCAGGGGGGTGACCCCTTCCTTGGCGATGGTTTTGGTGATTTTGCTGCCAGCCTGTAACGGCACAGAGACCCGCCACCTCTAGTAGGTGTGGCCAGGAGCTCCCCTAGCTGTTGCCGAGGTTAGTGGCCTCCCCTCTGAGTCCAGGGCCACTGTCATTGTCACTGTTAGCATGTCCCTGTTACGGCATTAATGGTAAACCTGCCAGCCTGAGTCTGAGAGAGGCCTCGGTAACTGATGGACTACTTTCCTGCTCCTTAGAGATGCAGCCTCACACAGCTTAAATGGGCTCCACGATGGGATCCCATCTCTCTCTCGGCCCTCTGACCCTGGTGCCATTGGGTGGGCAGGTTCCCATTCCTGGGGGCCAGGAGGAGCAGCTTGTCTGTTTCTGGTCAGTAAAGAGCATCTTCTCTCATGTACCATTCTGTGGCTTCAGCCATGGGGGCAGTAGCTCTTCCTTAGCGTGGCAGGTTATTTCCTGGCAAGGCCGAGGCTAAACCAAAGGGTCTGGGCCCACTCGGGACCCACTTGATGGCACGTCCCCAGTGTGGGGATGTGCCGTGCTTCCTGAATTAGTGTATTGTAGGAGTTGCTGCCCCATTCTGCTCTTCATTGTGAGAGAGGTTACACCCACTTATAATCAGTATTTTCCTGGCACTAAAACAGCAGGGCTGGTATTTGCTGCTGCTTTCCCAGGGCAGGGTCCCTTCTTTTCGGCACTTTTGAACACTTGCAAGACACAGCCCTGTTATCTAACGGGTGGCAGGCATGTGTGTCTGCACTCGCTCTTTGCCACTATTTTGCCCTGCTCCATGCCAGAGAGCCCTGTCCCTGCCAGGCCCTGCCTTCCCAGCCCCAACTTGGGACCAAAGTGCAAGACGGGATCACAGGTTGGGGTGTCCAAGTGACCCCTCTCTATAGTGCTTCCGTGGGCCAAGTCGACACCAGCCCCCTAGCGGGGTGGGATGGGCGGTGCTTAAAGAGGAAGGGGACCAGTGTAGCAACTTGCCAGGGACCCCACCCCTCCCTCACATCCGGGCCTGTGCAGTGGGCGTGGGGATTCTCCAAAGGGGCCAAAGGCCTGGGCTTGTTCGGTATTCTCTGCTCCCTTGCTCTTATCTGGTCACATGCACACTCCTAGATGCAGATTGCTTTGAACTTTAAAACTGTTCAGTTTGGTTTCGTTTGTACCGATTTAAAAAATGTTTTAATGGGGAAAATTTGGGGGAGAACCGTGGGTAGGGCCTGGTTCCTTTGCTTCTCGGGGAACTACAGGGCCTTGTCCGGAGGACCGCTCTCTGCTCCACTTTCCTGGAAGTTGCCTAAGCCTGTCCACGCCGTCCAAGCCCTGCGCCCGGATATGACACGTGGCTCCAGTCACGTCTGGGCGCGGTTGCGTTTTCTCGGGACCTTGCGTGCAGGGGAGGGAGTGGTCAGGCCTCGCGCCGAGTCCACCCTTTCTGTACACCTAGCGCTGCCCGCCCCGCTTGTGTCTGAGGTCGTGTATGTCAAAATAAAGCCGCTAGAAACTGACGCGTGTCCGTGTCTTGGAGAAAATCCGCGGACTCCGGGAGTCTTGCCTGATCAGGCCCTGCCGCGCCCCCGGCCCTGCCCCTTTTTTCCGGTCAGGCGGGGTGGTGCCGGAATCTGCC EMBV3_43697 GGAAAATCCTTTGATGGGTTGGGCGTCAACGATGGAGCTATGATGTTGAGGAGAGAAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35763 TGGACTCAGATGTTCCCCCTCCACTCTTACCAGACCACCCTCAAGACCACGTGAAGAAAA Gene GeneID:524030|GJB5:XM_002686488:576_cdna Constitutive 2 NULL GeneID:524030 3 GENE GJB5 NULL gap junction protein, beta 5, 31.1kDa EMBV3_06998 CACCTAGGATGACACTCAAGACAGTGGAGTATAGTTTATTATGCCAGCGGATCCAAGGGG Gene BVV0102_256322 + 0 NULL GK000026.2:16288434-16336197 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28117 ACCCCTTGCCTGAACAGCTTCTTCAGCAGCCTCAGCACCCTAAGCGTCGGTAGTAGCAGT Gene GeneID:787272|LOC787272:XM_002691354:187_cdna Constitutive 0 NULL GeneID:787272 11 GENE LOC787272 NULL similar to forkhead box I2 EMBV3_26182 AGCAGGGCCAGACTCCATATTACAACCAGCAGCCTCAGTCTCAGCCACCGCAGCTCCAGT Variant GeneID:540181|ARID1A:XM_002685761:549_cdna 848^934 1 EMBV3_06972 GeneID:540181 2 GENE ARID1A NULL AT rich interactive domain 1A (SWI-like) EMBV3_22252 GCAGGCAGACGAGCTGCACCAGGGCAGTGAGCAGGACTTTCTCTGGCGCCTGGCCCGGGC Variant GeneID:514748|FAM82A2:NM_001075679:151_cdna 809^868 1 EMBV3_22593 GeneID:514748 10 GENE FAM82A2 FAM82C MGC139009 family with sequence similarity 82, member C EMBV3_24425 CCTTTACAAAACACCAACTTTCCTTGCCCTCTCCCAGCGGCACCTGAACATCATTGTGGG Gene GeneID:539460|LOC539460:XM_002688197:53_cdna Constitutive 0 NULL GeneID:539460 6 GENE LOC539460 NULL similar to mCG9761 EMBV3_38783 CATCTAATCACTGTCAAGTTGAAGGCGAAGAGCTCCTTAATAAGCATTTATACTCAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33496 TGTACGATGGCCAGCTGGGGAGAATTACAGCACTGGGCTACAAGAAACAATTAGGAAACA Variant GeneID:512028|LIPH:XM_002684870:6_cdna 521^622 1 EMBV3_15127 GeneID:512028 1 GENE LIPH NULL lipase, member H EMBV3_02746 TGCCTGGGGTTTTGGGTGTTTGACCCAAAGTCTTTGATCCTTCTAGCCAAGCCCTCTGGT Gene GeneID:618107|C8H8orf13:NM_001076494:23_cdna Constitutive 3 NULL GeneID:618107 8 GENE C8H8orf13 C8orf13 chromosome 8 open reading frame 13 ortholog EMBV3_04739 TCATGGTCCCACCCCCTCAGCCTTGGCGTGAATTCCTTTAAAATAAGGGCAGGAAGACTT Gene GeneID:407118|SLC6A1:NM_001077836:74_cdna UTR3_Alt 2 NULL GeneID:407118 22 GENE SLC6A1 NULL solute carrier family 6 (neurotransmitter transporter, GABA), member 1 EMBV3_26674 GCCTCAACAAAGCACAACCCTTAACTTACGGAGGGAAGAGACAACCACAGATGGAAAGAC Gene GeneID:407186|OMG:NM_001077524:197_cdna Constitutive 0 NULL GeneID:407186 19 GENE OMG MGC139761 oligodendrocyte myelin glycoprotein EMBV3_01019 TGCTCAAGCCGTGGCTGTTCACGGAGATCAAGGAGCAGAGGCACTGGGACATCTCGTCAT Gene GeneID:508812|DUS3L:XM_002688886:130_cdna Constitutive 0 NULL GeneID:508812 7 GENE DUS3L NULL dihydrouridine synthase 3-like (S. cerevisiae) EMBV3_21645 GCCCAGCCACAGACCAGTCAAGCACTTAGCGGAGCTGAAGATAAAGCTGGAAGTATTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24266 CCGCCCCGCGTCGCGGGACGCGGAGACCGGGGTCAGGAAACTGGAGCATGGCTATGAGCA Variant GeneID:534637|DISP1:NM_001038161:68_cdna 96^168 1 EMBV3_20677 GeneID:534637 16 GENE DISP1 MGC133788 dispatched homolog 1 (Drosophila) EMBV3_43030 GTTTCTGTGGGTCCAGATTTGCTGGGTGAGGGGAGTAAAGGTGGAGCAGAATCCTTCAGT Gene GeneID:100295453|LOC100295453:XM_002690612:117_cdna Constitutive 0 NULL GeneID:100295453 10 GENE LOC100295453 NULL hypothetical protein LOC100295453 EMBV3_15065 CACAGCTATTTCACACCAGGGAGTCTCGTCTGAAGGACCAAGTGCGAGGCTTCTGTAGGA Gene BVT0102_360777 + 0 NULL GK000012.2:70562688-70706584 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037191 TCONS_00037200 TCONS_00037195 TCONS_00037194 TCONS_00037197 TCONS_00037192 TCONS_00037198 TCONS_00037193 TCONS_00037199 1 XLOC_021325 Coding TCONS_00037193 XLOC_021325 NonCoding Coding - 12:70654715-70675286 - TSS26896 211 0.682464454976303 2 0.989839572192513 8.27528802580134e-68 0.000472480991005158 0.000377783180291306 2.94051150459575e-19 0.00038688522857115 0 0.00016102168002211 0.00035451932945736 5.45529261656035e-55 1.53567540969018e-05 2.73937969589565e-188 9.97826267121234e-83 5.92706352175466e-05 1.17270707328704e-13 3.10099197416233e-48 0 0 0 0.000150613237535508 0.000587280149805485 0.000509615600869813 0 0 0 0.000561925610288869 0.000330209466118208 0.000269378729415935 1.40020346057209e-05 8.58163034827254e-06 0 XM_002691939.3 LOC528412 PREDICTED: Bos taurus aTP-binding cassette, sub-family C (CFTR/MRP), member 4-like (LOC528412), mRNA. 7e-20 100 91.43 0.327014218009479 0 noncoding GACTCCGCACACGGCCCTCAGAGCTGAGGTGTCGGCACAGCCATTTCACACCAGGGAGTCTCGTCTGAAGGACCAAGTGCGAGGCTTCTGTAGGAGGCGGGCTGTGAACAAGTGAAAAAAGACTCAGCACAAAGGGAGAGATAAAAGGTGGCTAAACCCCTTGTTTAGAATTGGTCACGAACAGAAATTAAAACAAGATGACATGTACTCG TCONS_00035540 r 5' 51806 TCONS_00035540 r 5' 31299 EMBV3_05650 TGGTGCCAACAGGGGGACACAGACTGCAAAGAGAAGCACAAACTCTGAGCCTTGATACCT Gene BVV0102_015882 + 0 NULL GK000018.2:34904337-34907614 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29274 CCAGATGCAGGGCCTGGTCACCAACGTAGAGTCCCAACTGGCTGAGATCCGCTGTGACCT Gene GeneID:788182|KRT32:NM_001101302:252_cdna Constitutive 0 NULL GeneID:788182 19 GENE KRT32 NULL keratin 32 EMBV3_03736 CAAGCCCATCGGGGACGTAATTAACTGGTGCATGTTCATCTGGTGCGTCTGCTTCACCAT Gene GeneID:100295700|LOC100295700:XM_002696551:21_cdna Constitutive 0 NULL GeneID:100295700 21 GENE LOC100295700 NULL similar to myeloid-associated differentiation marker EMBV3_20886 TGAGAACTGGTGGTATCGTGGTGAGCACTGCGAAGAGTTTGTGTCTGAGCCCTTGGTGAT Gene GeneID:517845|IMPG2:XM_002684719:32_cdna Constitutive 0 NULL GeneID:517845 1 GENE IMPG2 NULL interphotoreceptor matrix proteoglycan 2 EMBV3_30307 CTGTCCCTGGAGATTGCACTCCTGGAGCTTCAGATAGATAAGCCAAAGGATGCCTCTTAG Gene GeneID:510860|LOC510860:NM_001075473:52_cdna Constitutive 0 NULL GeneID:510860 16 GENE LOC510860 MGC140378 C4b-binding protein alpha-like EMBV3_16265 AGCCTTTAAATCACTGCAGGAACAAAACAGATCTTCATCATAAAAGAGGAGAAACAGATA Variant GeneID:100124522|INTS8:NM_001102556:290_cdna 689^753 1 EMBV3_31833 GeneID:100124522 14 GENE INTS8 MGC143405 integrator complex subunit 8 EMBV3_02439 GATCCCAGACAGAGTGCAAAGGAGCAACAACCTGTGGAACACCACCCCTGTAAACCCAAA Gene BVT0102_369868 + 0 NULL GK000014.2:32566999-32699359 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42169 TGGGCTCCAGTGAAAGGCAGTGGTCATCCTTGTCATTCAGTAAAGAACAGGAGGGGACAA Gene BVT0101_047733 + 0 NULL GK000006.2:36432431-36979538 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204918 1 XLOC_124548 NonCoding TCONS_00204918 XLOC_124548 NonCoding NonCoding - 6:36630857-36678596 - TSS153166 459 1 TCONS_00204918_2 78 3 0.990447861242616 1.1000341963441e-79 9.56541310694211e-05 0.000259480731118644 0.000482260862216766 0.000103488192538701 0.00040117657864504 0.00015672470225206 6.54834269761184e-95 0.000146420449214937 2.6359679216979e-05 7.07613190867652e-63 1.32857751194929e-06 1.5842469724278e-05 0.000255034795028423 6.35642495052932e-54 0 0 9.43549102844207e-08 0.000932877346830673 0.00146849902225124 0.00110293715284727 8.4928198743544e-120 4.81518397735579e-113 2.38625145216534e-06 7.8701681236643e-05 0.000719591833702242 2.43466372369261e-62 0.000692977085528673 2.9751515537425e-05 1.98007242208454e-51 0 noncoding CACATCCTTTCCCCTTTCCGGTTCTACCCTCCTGAAATGGAGGTAAGATGGCAGAAGTCAGAGCAAGCACTGTGGGACCTTGGGAAAAAAAGTCAAGAGAATCTCAGTTATCTCAAGGACCAAAGCTATTTGAATCACAACTGGAAACTACCGAGGGATTGTTCCTTCTCTGGGCTCCAGTGAAAGGCAGTGGTCATCCTTGTCATTCAGTAAAGAACAAGAGGGGACAACAGAGTGCCAAAAACAAGTGCTGCTTTTGGTGGAGAACAAAACTTCTGGTTTAAAAGAAGATAATAGAACAATTAAGCTATTTTTTTTACTTACATTGACCAGCTTGACAAGCAAAGATCTTTTCTAGGATGAAAAAATGTGTCTTTGTTTTCACTTGTGTTAGATCCTATTTTCTTTGATACTTGAAACATTGTTTTGGTCTATTTATTTTCTGTTTGTCAAATTATG TCONS_00202953 TCONS_00202954 TCONS_00202958 TCONS_00202963 r 3' 198428 TCONS_00202953 TCONS_00202954 TCONS_00202958 TCONS_00202963 r 3' 198673 EMBV3_13855 TACCTGGATATCCGTCAGAATCCCACTGGATGGTGTGCTGAGGGCATCGCTGTCGACTTA Gene GeneID:100337322|LOC100337322:XM_002698173:671_cdna Constitutive 0 NULL GeneID:100337322 25 GENE LOC100337322 NULL protein kinase, cAMP-dependent, regulatory, type I, beta-like EMBV3_36168 CCGACCAGACCTGAGAATACCTGAAATTCCACCCAAACCTGGAGAACTTAAAACAGAGCT Gene GeneID:100190887|LOC100190887:NM_001135571:856_cdna Constitutive 0 NULL GeneID:100190887 5 GENE LOC100190887 NULL hypothetical protein LOC100190887 EMBV3_21363 CTTCGGACACCACGCCAAGTTCATTGCTTCCACGGGAATGGACCGGAGCCTCAAATTCTA Gene GeneID:513868|PRPF19:NM_001075640:158_cdna Constitutive 0 NULL GeneID:513868 29 GENE PRPF19 MGC139473 PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) EMBV3_28419 CTTCAAGAACTGAGACTCGAGCCCAAGAGGATATTCGCAGAAGCAAGAACTGCAGCCTCT Gene GeneID:512086|SNAPC4:XM_002691618:279_cdna Constitutive 0 NULL GeneID:512086 11 GENE SNAPC4 NULL small nuclear RNA activating complex, polypeptide 4, 190kDa EMBV3_28033 TGGGGGTCGGGACCTTCGGCAAAGTGAAGGTTGGCAAACATGAATTGACTGGGCATAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32293 CCAACCCTCCAGTGGTGGAAGGACAACTATTACAACTAAAAAGTATAGGACACAGTATCC Gene GeneID:614768|LOC614768:XR_084723:32_cdna Constitutive 0 NULL GeneID:614768 X PSEUDO LOC614768 NULL similar to premature ovarian failure 1B (predicted) EMBV3_03994 TTGGAACGACGTGGCCTGCCACCTTACCATGCACTTCCTCTGCGAGTTCGACAAGGAGCA Gene GeneID:613991|COLEC11:NM_001076303:22_cdna Constitutive 0 NULL GeneID:613991 8 GENE COLEC11 MGC140787 collectin sub-family member 11 EMBV3_31557 AATCGCTTACTCTGGAGTCATGGCCAAGGTCTGTGGAACTGTTTTTGTGATTCAGGATCC Gene GeneID:522221|TTLL7:XM_002686292:156_cdna Constitutive 0 NULL GeneID:522221 3 GENE TTLL7 NULL tubulin tyrosine ligase-like family, member 7 EMBV3_17902 CAAAGCAAGACCCTTTGTCTGAAACATCTGGAGGACAAAAGAATGAGGAGAAAAGTCTGC Gene GeneID:100140733|LOC100140733:XM_002685253:56_cdna Constitutive 0 NULL GeneID:100140733 2 GENE LOC100140733 NULL similar to FLJ44048 protein EMBV3_28272 GGGAAGAGAAGGGTGACTTCGAGAAGAAAGGGGGCATCAGCTTTGGGAGAACCAAGGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00837 TGACTGTGCTGGGTCTTAGTTGCGACACGTGGGATCTAGTTCTCTGACCAGGGATCGAAC Gene BVT0102_042799 - 1 EMBV3_04774 GK000001.2:136528515-136573248 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00005 CATCAGCCAGCGATGTATGGAGTTACGGGATTGTTCTCTGGGAGGTGATGTCCTATGGAG Gene GeneID:537951|EPHA3:XM_002684667:11_cdna Constitutive 0 NULL GeneID:537951 1 GENE EPHA3 NULL EPH receptor A3 EMBV3_34594 CAGTGACATTGTACGCCTCCTGTATTCTCCTGGGAGTGTTCCTGAATAGCAGTATACCTA Gene GeneID:783019|DIRC2:NM_001101287:110_cdna UTR3_Alt 3 NULL GeneID:783019 1 GENE DIRC2 NULL disrupted in renal carcinoma 2 EMBV3_11719 ATCGTCTTGGCCAAAGTGATCTCCCTAGGTGATGCACAGTCCAACTACCTGCTAACCACC Gene GeneID:506018|EXOSC1:NM_001015529:84_cdna Constitutive 2 NULL GeneID:506018 26 GENE EXOSC1 NULL exosome component 1 EMBV3_33966 AATTGGGATCAGAGCTGGGGCAGGTGAACAAGATAAAAACCTTGGAAGGGGCTGCTCCCG Gene GeneID:533897|TAOK2:XM_002698086:101_cdna Constitutive 0 NULL GeneID:533897 25 GENE TAOK2 NULL TAO kinase 2 EMBV3_15392 AACACTGATGCCTACTTATCCCTCCAAGAGCTCCAGGATCAGGACCCAGCTTACTTGGTA Gene GeneID:510185|IL2RB:XM_002687690:66_cdna Constitutive 0 NULL GeneID:510185 5 GENE IL2RB NULL interleukin 2 receptor, beta EMBV3_18004 AGTCACAGTATTTTACAACTGCCCATTGACCGGCCAGAACTGCTTATTCCTGGTTCAGGC Gene BVV0102_376167 + 0 NULL GK000001.2:64488106-64552410 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008142 1 XLOC_003702 NonCoding TCONS_00008142 XLOC_003702 NonCoding NonCoding - 1:64523657-64524398 - TSS5219 741 1 TCONS_00008142_1 39 0.275303643724696 1 0 0.000146890037276244 1.35606446177224e-05 6.24426250010936e-05 2.24133461968875e-05 0 0.000200334483540924 5.50903590771881e-05 3.99103575531764e-05 0.000181015897130911 0 0 0 0 0.000165052225726334 0 0 0 0 0.000222579099871455 0.00012778297790679 2.45808214583192e-05 0 0 0 0.000168303131439668 0 0.000284655200723737 0 0 2.43410670002808e-05 XR_226915.1 LOC101906656 PREDICTED: Bos taurus uncharacterized LOC101906656 (LOC101906656), 2e-65 253 87.14 0.276653171390013 0 noncoding 0 0 0 0 0.0483641997936878 0.704218544194774 -0.0310164809366083 0.648136354403359 TCCTTGGAAAAGACCCTGATTCTGGGAAAGATTGAAGGCAGGAAGAGAAGGGGACAACAGAGGATGAGATGGTTGGATGGCATCACCGACTCGATGGACATGAATGTGAGTAAGCTCTGCGAGTTGGTGATGGACAGGGAAGCCTGGTGTGCCTTCAGTCCACGGGGTCGCCAACTGATATGACTGAGTGACTGAACTGAACTGAACTGGGGCAATCATGAGTCACTCCTGCCCTCTAGTGGAAAAAGTAATGTAATGCACATGAAGGCCATATTCTTATCATCTAACGGACTCTTTGAGAACATTGCCTGAACCAGGAATAAGCAGTTCTGGCCGGTCAATGGGCAGTTGTAAAATACTGTGACTAAAATTGTTTTTTAACTCAAAAAAAAAAAAAAAAGACAATTTTTTATTCAATATTTTTCTAAATACCCATCATTTGATTTTAAATTTTGTATTAATATCTACAATAGAAAACTTACTTGTATTTGTAATTTAGTCCATCTGGGAAGTCAATCATATTAAGTATGTTTCACTTTTTAAAAATTTGCACCAAGTGTAATAAATACATTTCAAAATAAATAGTCATGTGAAAATTGAAACAAAAAGCCACAAGTGAAGAATGCCATTTAGAAGTATAACAAGTCACTCAAGAGCACTTCTAGTCTGTTACTACTTAAATACTCATGATTAATCCCTCCAGTTTCTAACCTCAGTTTTCAAACCAGTTCCATATCACTG TCONS_00000808 . 5' 28087 TCONS_00000808 . 5' 28087 EMBV3_06702 AATGAAATAGTCCGGTCCAGCTTCAGAGTGTCTGGGTACGCGTGATCTTCTCCTCTGATC Gene BVT0102_255474 + 0 NULL GK000023.2:10810384-10836789 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132345 TCONS_00132339 TCONS_00132343 TCONS_00132340 TCONS_00132342 1 XLOC_080757 Coding TCONS_00132343 XLOC_080757 Coding Coding C23H6orf89 23:10772584-10813653 = TSS99038 6534 1 TCONS_00132343_2 445 0.0188246097337006 9 0.841117171520405 0.0024660069365424 0.000903425679292306 0.00185182265862916 0.000592663022878895 0.000969959617079552 0.000292510263269016 0.000492397627166166 0.000776386483265168 0.000588426958094414 5.46753795473703e-09 6.70392289659578e-25 6.11114866787922e-08 1.12175270017791e-12 6.78827705202208e-05 9.4490699295657e-22 0.00015470887911534 3.79269233222426e-05 0.00108163702266333 0.0017293023295508 0.00275977354216215 0.00108525634362925 4.27542894455714e-05 0.000523072915594923 0.000409814350827885 0.00240082956457077 0.00180663208642516 0.00129960707399739 0.00014004430908804 6.18144414223403e-05 3.14040962276173e-09 XM_871203.6 C23H6orf89 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf89 (C23H6orf89), transcript variant X3, mRNA. 0.0 1.163e+04 100.00 0.986685032139578 NM_152734.3 C6orf89 Homo sapiens chromosome 6 open reading frame 89 (C6orf89), mRNA. 0.0 2617 76.00 0.561830425466789 TCONS_00132343_2 sp|Q99KU6|CF089_MOUSE CF089_MOUSE Bombesin receptor-activated protein C6orf89 homolog; 0.0 624 83.33 0.779775280898876 0 coding 0 0 0 0 0.0504303973158638 0.654791078016655 0.0208839043942401 0.689667341231755 ATGCCTTATCCAGTTCAGTTCAACATTCACGCAGGGCATGTTCCAGATCAGAATCTGAACAGAGCGAGTTTCCAGTGTAATCTCGATTCTCCGAGACATCGCCTGATCTACTTCTGGCGGAAGCTTCCGGCGGGAAGAAGAAGCGCTGCCTCGCCTGTGGAGTTGCTTCCGGGTCGCGCGCCCGGAAGTAGGAAGTTGTCGGCCTATCCTCCTCGCCCGGAGGCTTGCTGTCCCCGAGGCGGGAGGAGCCCGAGGGGGCGCGGGCTCAGCGTAGACTCTGCATTGGAAGACATGGATCTTGCTGCTAATGAGCTCAGCATTTATGACAAACTCTCAGAGACTGTTGATTTGGTAAGACAGACGGGCCATCAGTGTGGCATGTCAGAGAAGGCAATTGAAAAATTTATCAGACAGCTGCTGGAGAAGAATGAACCTCAGAGGGGGCCACCCCAATATCCACTCCTTCTAGCTATGTACAAGGTCTTCATAACCCTGGGATTAATCTTGCTCACTGCCTACTTTGTGGTTCAACCTTTCAGCCCATTAGCACCTGAACCAGTGCTTTCCGGAGCTTACACCTGGCGCTCACTCATCCATCACATCCGGCTGATGTCTTTGCCCATTACCAAGAAGTATATGCCAGAAAATAAGGGAGTTCCTCTGCGTGGGGGCAAGGAAGACAGACCCTTTCCAGACTTTGACCCCTGGTGGACAAATGACTGTGAGCAGAATGAGTCGGACCCCACCCCTGCCAACTGCACTGGCTGTGCCCAGAAATTACCCCTCCAGGTGATGCTCCTGGAAGATACCCCAAGGAGATTTGAGAGACTGCATCCTCTAGTGATCAAGACGGGACAGTCCCTGTCGACTGAGGGGCTTCAAGACTTTTTGTGCCAGTATCCGGAGGTGACAGAAGGCTTCACCGAAGGGTTTTTCACCAAGTGGTGGCGCTGCTTTCCTGGACGGTGGTTCCCATTTCCGTATCCATGGAGAAGACCGCTGAACAGATCACACATTTTACATGAGCTTTTCCCTATTTTCACCTATCTGCCGTTTCCAAAAGAAGCCTCCTTGAAAAAATGCTTCCTTCTTCAACCAGAACCTATTGTGGGGAGTAAGATGCACAGGATGCATGACCTGTTCACCATCGGCAGCGGGGAGGCCATGCTGCAGCTCCTCCCGCCCTTCCAGTGCCGCAGCCACTGCCAGTCCGTGGCGATGCCGCTGGAGCCAGGCGACATCGGCTACGCTGGTGCCACCCACTGGAAGGTCTACATTATAGCCAGAGGGGTCCAGCCTTTGGTCGTCTGCGATGGAACCACCCTGTCAGAGCTATAGGACACAGATCTAAAGGAACAGCTTTGAGAGCTGAAGACCAGATCGAAATGGGGAGAGTAAAAACAAAAAACAATGAAACCACTTTCCAGGGGTTGGTTACTTAATCACCTGCCCTGTGCATGCATGTGTGAGCCAGTTGTGTGCTGGAGGCAAAGGCCGGAGCCTGGGCCTCCCAACTCTTCCAGCCCAGCCACTTGGCCAGGACTCCGCCACCAATACCCATCTATGAGAGATGGGCCTCTGCCCAGCCCCTTGGCACCAAAGCCTTGAGGCTGCCTTCAGGCAGGGAGCAGGGTTGGTACCCTCCCTCACTTGCATGGCATGATCCCCTCTGCTGGCTCCTGGCCATGAGAGGGCAGTCAGCAGGTCCTGACTTCAGCGCCATCCTCTGCCAGGTGGGCCTGCCTGTCCCATCTCCCTGGTAACACCACCCTGTACATCTTTTGGAAAGCCACGGATGGTTAAAGAAGTCATGGCAGTTTCCCAAGCACAGTGGAATATCGAACCAGTGAAAAGGATCAAACAACCTCAAACTGCACTCGAGAAGTGCACTTCTTTCCCAAGTGCGAGTGGCTCTCGGAGTCTCCGGTGCCAGGTCAGAGCCTGATTATAATTGAAGCGGTAATTCCTAAGGTAATACCTTCCTCCATTTGGGTCAGGTTCTCAGTCTCTCCCTCCCTCCCTGCTCCCTCGCCTGTCTGGCCGGCTTCTCAGCAGTCGGACTCCCAGCGCCCCTCCCTTGGCCCAGCCAGAGCCCTTTACTGCTGAGGCAGCACTGCTCTCATCAGCTGTGTTGCTTTTACCAAATGTCTTCAGAAGGGGGTGAGTTAAGAGTGCTGGCCCGGGGAGAGGGCACCTCCCCGGGTTTGATCTTTAGGGTCCGACTTTCTGCAGAGATGTTTTACAGATGTGTCAAAGTGATGTTGTCATGTGGCTAGGGAAGGAACTCCAGACGCAAAGTGCTGGTCAGCTGGGCGTGCGACTGTGCGGCTCTCTGTCTTGAAATGATTTCTCTCTCTGTACTGGGAACCAAGGCGAGGTGTTTTTAATTCTTGTGAAAATACAAAACCATGTTCCTTTTGATTGGATGATTCGCTCTGCTCATTGTTTTCCCCAAGTGCTTTTTGTATGTCTTAAGTGTACAAATAAGGACACTTTTTTGTTTCTTTTCCCCCTTTATTATTCCTTTATTGACTTTGTTAAATATCTGGCCTCTGATCATGCCATTGCCAAGCTGAAGGAAAAGAGGCAGACCGTGCTACAGCCTCTGGTTCTGAACTGCAGAAATCAGACCGATAGTGGAGGTGTCTGCCGTGTTGAATTACAGACCAGAGGCAGACAGTGGTGGGGGAAGAGAATGGGACTCACTGTGGGGTCCTCGTCATCCTTTGACGGCACCCCTGCATCCTGTCCCAGGCCCTCTTTCTCTACACATCTCGTGAGCGTCAGTGAGGATCAGTGTGTGCTTGAATGGCCTGTTTAGGGGCTTGTAGAGGACAGGGAGGGTTCACATCGCTCAGAGCCTCCTCCACAGACTTGAGTGAAAGTAGGATGAACTGTACCTGAGGGAATTTTTGCTTAAAAGAATCAGTACCATGTGTGCAGTAATACAGGAAAAACAAAACTTCATGTCCGTATAAAAGGCACGCTGCTAAGCAGTTACAATTTAAGAGGTTTTAAATCAGAGGGACCAGTCAGAGGCCAGCTTTGTGCATACTTTAGAGCCTTTGCAATGTCCTTGCCCCTGGTGATATGTAAACAGGTTCTTTAGAGGTCTCTCAGAGTTCTCTTAAATTAGGCCTTTTGGGTTAACAGAAGAGAGGGTTCCTTAGGAGCAAAGCAACTGTTTTGGTGATCCAAATTCCCCATTTTACTCCAGCCCTTCACACCTTAAATGACCATAAAAATGCCATCTTCAACTCAAAACTGAACGAGTCTTGTGTGTGTGTTGGTGTTCTGAGGCCTTCTGTGGGAGGTCCCCAGAGCTGTCAGCTGTCTTCAACAAAGAATGGTCTGGCAGCAGATAAGTAGAAACTTTCCGTGTGTACACTACTCATTTTACTTAACATCTGTCCAGTTCAGAATTGAATGTAGATTTATGTTAGGGGTGAAATTCTTCAAAGAAGGTTTTTTAAGTAAGGTACCTTCTTCTCAAGGTAATTCTGAAAAGCAGACTCTACCACTGACTGGTCAGTGGTCAGTGAGGAACCAGCTAGTTCCTTTCCAGTTACCCAAGTCTTTGTGTGAGTGTGCCACGGGGTCACCCCTGCTCACCTCTCTCTCAGCTCCTTCGTGGAAGCAGCAAAAGTTTCTCCACATGACCCAGTGTGGGAAGGAGGCTCATGAAGATGAGGAAGCAGGGTCAGGGGGCTGGTGGGGCCATAGAAATCCCCGTGTCTACCACCACCCTAAGAACAGTCACAGGGCTTGCTTTAAACAGAGGGCCTTGCTCACAAGTTTGTTGAGTGTTTACCAAGAGGTGACATGGCAGTGAAACTCATGTACTGCGTTTCTCTGGGGAGAAAGGCTGCTTTGGCCCCAGTTTGAGGCATTATATCCAGGTGTCTTGAGGTTCCTGAGAGTTGGATGTTGAGAAGAACACTACCCCTGCCCTGGTTCATGAAGAACATAAGTAGAACTTACCCTCCCCCCACTCTCAATTTGTTCAGCAGGGGGAGAGAGTAAAGTAACCATAGTTTATGAAAACAGAATCTGCCTCTTTGGTGAAATACAAAACCATCTATGAAATAGACAAATTTGGGGTCATTTTCTGAGAGACATAGTAATGTTTCTTAATAATGAAATAGTCCGGTCCAGCTTCAGAGTGTCTGGGTACGCGTGATCTTCTCCTCTGATCTTTGCCCAGTCCTGTGAAGCAGCTATGAGAGCCTCGTTTACAAGTAAAGAAACTGGGGCCCAAGACAGTTCCTTTGTCGGCGGTTGATGGCTGGCTCCACAGCAGTGTCTTCCCGCGCCAGTGCAGAGTGGTGCCCAGGAGGAAAGCCGTGGGTCTAGCTGACTCTGGTGTGCCCAGCTGAGTGGGAGAACCTAGGGGCAGGCTCAGCAAGCCAGGAACTCTTCAGGGTTTGTTTTCAAAACTGTTTGAGACAGAAATGGAGAGAAGCTAACAGATGACTTCTATAAAAAGCCCTTCCCCCGTCCCCACCTGAAAGCGCTTTTTAGGAGTGCATGTTCCAGCCATTTTCGCATCATCGCAAGTTTCCAGATGTGTGACCAGCAGAGGGACTCAGCCCAGTTCCAGTTGTGGGTCCCCTTGGAGTTCGCATCACTTGTTTTTTTAGTTCGCGGTTTTCTATTCCCTTCTTCCAAAACCCAGCATAGACCTCGGTGTAGGAGCAATTTTAAAACAAAATAATTCCTTAGCTGCAGGTGATGGCCTCAATCATTTTATGTTTTTTATATAGGCAGTGTTCTTTTTTTTTTTTTGGCTGCACCACATAGGGTGTGGGATCTTAGTTGCCTGACCAGGGATTGAACCCGCATCCCCTGCACTGGGAGCACAGAGTCTTAACCACTGGACCACCAGGGAAGTCCCTCAGTCATTTTAATACGATCTGGATGCAGTTTTGCTCATTAGCCAGCGGCTTCCGTAGTGAAAATTGAAACCCTCAGAGTAGATGTTTGCTTCTCCTGTAATCCTCACCCAGCAGGCGGCCAGGTTGTAGAGGAAAGAGACTAGAGCAGGGGGAGAGTCGATCTTGTCTACCTTTCGAGAATCAGTTCTCAAACAGGAATATTTTAGACTTTTAAGTTTTCCTATCGCTAGAAGACAGACTCTCCTGACTTATAAGTTGCACACTCATTAACTTCCCCTTTTCAGCTTTTTCACCCACTAAAATTGGTTGAAGGAAGGGAGTGCCAGAGACGTGGTTTAACATAGCATTTTGGTTTGAGAACCTCTCCACGTTCGGACCCACGGATATTGGGTCCAGAGCTGACGCACGTCAGGGCCAGGCAGCTAGGCAGATGAGGTGCTTACAGAGCGAGCTCTGTCACAAATGGAAAGTTTGTGCTCTGTCGCCATCAGCCTCTCCATATCCAGCAGCTGCTTCTGCAGAAGCATCTCAGAGAAGACGGACAGGTGGTCTCCCTCGGGCACCACGTCTGAGTCCACCCGCCCTGGGCGCGGCGTGGCTCTTAAGTGCTGGCCCTGGTGAGAAGCCCTCCAGCCAGCTCGTCTGCCGTCCAGGTTGCTTCGCGTCTGGTTTTCGTGCCCTGCATAATTTCAGCATTAGAGCTAACTACACTCATCATGTCTCCCTCTCTGGAGACCGTGAGACGTCCAGATCTTTGCAGAATACTGGAGAGAAGAGATGTTACGAAACTCCTAAGCAGAGGCCTGGAACTGTCCAGACATAATGGGGCTGCCCACAGGCCACTCCTGCCTTCATGCGTCTGTCTGTCTGTCAGCCAGTGTCAATCCAAGAGTGGGCCATAGCTGCAGACACCCGTGCTGAGAAGGGAAACCAGCTTAGTTTTGAGTTTCAGACAGAAATTGGAGAGTCGGGACATCTGCTTCACACCAGGCTTAATTTATCTCCTTATCCCTCTCCACGGCTCTGTGGGGGAGGTGAGGTCAGCCTGCAAAGCCACCTTGACCTACAGCTCAGCAGGGTCCCAGCCTTCAAACTTCAGCCCCTCAGAGCACTTCCAGCCATTTCAGGAACAAACACTTACCTGTGAGAGTTGGTGACCAGAACTGGGTGGACACACGCTGTTATTCCCAGAGAAGGCGCAACCTCCGTCATAGATGACCTTCCCTCCAAACTTCTCTCCATAGTCTCATCCTCAGAAAAACGCTAGCCATGGTCTCTTCCTCTTCCTCCTTCCTGTGGGAAAGTCAGTGACAGATGCCTAGGGCGGAAGGGAGTGGGAACTGGGCACTCAGCAAAGTCCCTGCCGCCACCAGGGGCGGGATCCAGGATGGCTGCAGCTCCTCTCTATGGAGCCAGGGGTGGCGGGCCCCGGGGGTTCCCGGTGAGCAGAGGGGCGGACACCTGTCCAGCCACGTGGGCTCCGAATGGTCTAAGATGTTACTCTGTGTTCAATGTGGAATGTTGATTGTAACTTAATGTACCTACTGCAAACTTGTAAAGAATGTATGTACATTAAGGTTTCATGTGACAGAAATTTTTACTTTTTGCAATTAAAAGTGTGTATGTTGGTTGATAAGAA EMBV3_15341 GGATAAGGTCATCACCAGCCGGAGAAACAGTGCAGGCCTCCTGCCAGCTTCTCCTCACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06158 GCATGAACAATATATCGTGCCCTTATCCTTTAGGTACAGCCAGATCAGCCGCGATGTCCA Gene GeneID:539693|AK3L1:XM_002695584:119_cdna Constitutive 0 NULL GeneID:539693 19 GENE AK3L1 NULL hypothetical LOC539693 EMBV3_35444 AGGAATCTTTGAAGGAGATAGCCCCTGCCCCAGCGGTCCAACCTTCAGCAGAACAGACAA Gene GeneID:511513|CDK12:XM_002695957:267_cdna UTR3_Alt 2 NULL GeneID:511513 19 GENE CDK12 CRKRS cyclin-dependent kinase 12 EMBV3_21950 ACAGCCAAAGGAAGTGAAACTGGTAACAGAACGAGAAGAGAAAACTATGCCTACTTAGTT Gene GeneID:511579|DPH3:NM_001113299:5_cdna Constitutive 2 NULL GeneID:511579 1 GENE DPH3 MGC138937 DPH3, KTI11 homolog (S. cerevisiae) EMBV3_06646 CGGGGTGTGGTGAGGAAGAGCCGAGAATGGGTCCACGGGGACCCCCCGGGCAGAAGCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03358 AAAATGCCGAAGCACCTGTCTGTTTCGTGCTTAGTATCTCCCCTGTCCATAGTGGTCTGG Gene GeneID:539074|TRPV1:XM_002695751:201_cdna Constitutive 0 NULL GeneID:539074 19 GENE TRPV1 NULL transient receptor potential cation channel, subfamily V, member 1 EMBV3_38927 TCAGATCTTCAAGATAAAAATGAATACAAGGATTTGGAACTTGGAAGGAATACAGACAGC Variant GeneID:100139879|NUP37:XM_002687637:793_cdna 486^580 3 EMBV3_23249 GeneID:100139879 5 GENE NUP37 NULL nucleoporin 37kDa EMBV3_30365 TTCATCCCCACCTAGATGCTGCTTAAAGACGAGCTTTTAACGTGCATCATCACCGAACCC Gene GeneID:530462|USP6NL:XM_002692052:42_cdna Constitutive 0 NULL GeneID:530462 13 GENE USP6NL NULL USP6 N-terminal like EMBV3_39310 CGGAGGTGCATTCTTAAAAGTCGAAATGCCTCATTTGGTTCTCCTAAAATCACAAGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11683 GGTACTCTTGATCACAATACATTTTCCCAGGTTGAGGAGATAGAGCCAGAACTGGGCGGG Gene BVT0102_404224 + 1 EMBV3_08600 GK000029.2:18067907-18074820 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04405 AGTGAGAAAACACCCCATAGGCGGAGAGGGTCTGACTCTCAAAGACAACTACAGCAGCAG Variant GeneID:616433|DPPA3:NM_001111108:67_cdna 422^508 1 EMBV3_39425 GeneID:616433 5 GENE DPPA3 NULL developmental pluripotency associated 3 EMBV3_04280 GGTTCGGGCCTAGCGGAGCCGGGACTGGAGCAACATGAACCGTGAAGACCGGAATGTGCT Variant GeneID:541306|AFF4:XM_002689151:155_cdna 74^165 1 EMBV3_18180 GeneID:541306 7 GENE AFF4 NULL AF4/FMR2 family, member 4 EMBV3_00569 GGGCACGTCCCGGATGATGAGCTGTGCTATCAAGTGACTTTTAAGATTGGGAGCTAAACC Gene BVT0102_235774 - 0 NULL GK000005.2:113185274-113206905 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196544 TCONS_00196545 TCONS_00196543 TCONS_00196546 TCONS_00196542 1 XLOC_118371 Coding TCONS_00196546 XLOC_118371 Coding Coding PPPDE2 5:113205161-113227847 = TSS146236 3187 1 TCONS_00196546_2 168 6 0.859775181838219 0.00918921029572629 0.00392559415430503 0.0101407526873554 0.00626787431355439 0.00337770712724111 0.000929706778355594 0.0034808012252486 0.00297027716945294 0.0049563773372087 0.0049355912888996 0.00200043162880842 0.000963377205829048 0.00107318043450968 0.00340659652229404 0.000564202581114689 0.00589951832525883 0.000341375269361792 0.000277812189836822 0.0052659697290469 0.00861982378850233 0.00278380114291136 0.00250304958608747 0.00187257540242267 0.00126225898992128 0.00804392891207341 0.00611738239987965 0.00739973860709971 0.000803906312157676 0.00113786905140459 0.0016297195128263 XM_002687946.3 PPPDE2 PREDICTED: Bos taurus PPPDE peptidase domain containing 2 (PPPDE2), 0.0 5748 100.00 0.999686225290242 NM_015704.2 DESI1 Homo sapiens desumoylating isopeptidase 1 (DESI1), mRNA. 0.0 1799 85.07 0.50392218387198 TCONS_00196546_2 sp|Q6ICB0|DESI1_HUMAN DESI1_HUMAN Desumoylating isopeptidase 1; 6e-114 325 95.24 0.994047619047619 1 coding 1 0 1 0 0.688929571852436 0.325778361284345 -0.00224946971917157 0.970913408111191 GACCGTGCCATCCCCGCTCTGTCACCTCACAGTTGCCGGTGGCGGGTGCTGGGGCGCGAGCAGCCCAGGGCGGCCTCTCCCCGCCCCTCAGGCCGGGCCGGGGCTCGGTCTCCTGTTCCGTCCACTCCCCTCCCCCGTCGGGTACGGGAAGGTCCAAGCCGCTGCCGGGTGCCTGAGGGACTTCGTGGCCGCCGCCGCCACGGGTCCCGATGGAGCCGCCGAATCTCTATCCGGTGAAGCTCTACGTGTACGACCTGTCCAAGGGCTTGGCCCGGCGGCTCAGCCCCATCATGTTGGGGAAACAACTGGAAGGCATCTGGCACACCTCCATAGTCGTGCACAAGGATGAGTTCTTCTTCGGCAGTGGCGGTATCTCCAGCTGTCCGCCAGGAAGGACTTTGCTTGGGCCCCCAGATTCTGTGGTTGATGTTGGGAGCACAGAAGTCACAGAAGAAATCTTTCTGGAGTACCTGTCCTCCCTGGGGGAGTCTCTGTTCCGAAGTGAAGCCTACAACATCTTTGAGAACAACTGTAACACCTTCAGCAACGAAGTGGCACAATTCCTAACTGGGCGGAAGATCCCTTCTTACATCACTGACCTTCCCTCTGAAATTCTTTCCACGCCCTTCGGACAGGCCCTGAGGCCCTTCCTGGACTCCATTGCAATCCAGCCTCCCGGAGGGAGCCCGGTGGGCCGACCCAACGGCCAGAGCTAACCGGACTGCATGGGACCGCCCTGCCTCACCAGGGCTTTTCCTTTTTAAACAAAACAAACCCTACCAGATTTCTATTTTATAATTTTACATCAGAGCTAACAACCAGGGGACGGCTTTTTAAATTTCCCAGGGAAGGAAATCATCAGGCTGCATGTAGGACACAGCTGCTAAGACACAGAACAAAATGCCATCCCTTCTAATAGTATTACACTAATTTATTAAGGCTCTCTTGTCTGTGAGTTCACTTTTGACGCTGCTTCCTAAGCGTCCTCCCCACTGGAGAAAGGGAGGGGCTTTGTTTAAGCAAGAGGCACTGTTTGGGGGAGCCCCAGCCCAGAACCTCTTTCTAGAGAATGCCCATACTCCACCCAGGTTGCAACCTGCTGTGGGACCCAGGTGAGTTTCACATTATCCGTGACCTGGAAGTCGTTACTCGCCACCATGAAATGAACCAAAGGATTGGTGCACATGGGGCCAGTTTCAGGGACATTCACCCAGCCTGAGTGAACTCTTTAGCCACAATCTCTCTCACCTTCCCTCCCCTCCCCCAGCAAGGCCAGGGGGCCCGGACTGGAGCAACCAAAAGCCTCAGGATGCGGGGAGAGTAACAGCAAGTGCCAGTCCAGAGGAAACAGGATAAAGCCATGCCTCCTTCCACCTAGACTGATGGCCCGTCCTCTGACATCGCTCTAGGAGAGCCTGCCTTGCTGTCTGCAGTCTGCTCTCCCTCCGTGTAGCTGACCTGTCACAGTTAATGAAGGTCTGGAGCGGCAGAGACCCAGGCCTTTTGTCTGCAAGTAATAATGTAGGTTATTGACAGTCATTGTACCCACCCCACCCAGACCAATGTGCAGTATTCAGCTGGGGACCAAGAGGAAATGATTCCCTGCTCTTGGAAGATGTCCCTGATGTAGAAAGCATAATAATGCAGAATCAAGGTGGCAAGAAAATGTAGTTATTTCTGATAGGGATTTTTATAGTATCCTAAATGTGTTTTGAAGGCACATGTTATTTCTGGTGTCCTTCTGACTTGAAGGAAGCAAGATGGAGGACATGAGTGGGCATTTTCATAAAGGGCTGTTGGCCAGGAGCTTCTAGGCAGGGAACAATCTGGAAGTTTCTAACCTGGAGAGGCTTTCAGATTCTTTTGCTTCCTGTGAGCCCGCCCTTAAGTTGGGAGAGTGGATGTGGAGAACTCAGCTCCCTGGTGCCTGAGCCCCAGCCCTGACCTCCATGGGCCCCTCCTGCCGCGGCTCTTGCCAGTTCTCAGACTTGAATTACCTTCTCTCTCCTGGGGTCTGGCCCACAGCAGCTGCCTTTCCTCTCCAAAGAGCTGCTGCTCACCTCTGGCCTCATCTCCCATCTCTGCCGTTGTCATGGCAGCGGGCATCGTCGGGTCTCAGCTGGAGGAAAGGTGCTCCTCTGCCTTAGTGTTTGCCTGTGACCTGAGCAGGGCACGTCCCGGATGATGAGCTGTGCTATCAAGTGACTTTTAAGATTGGGAGCTAAACCAGTGAGCACTTGAATCCTTCTCAAGACCCACTGATTGGCCAGTGTACATGGTAATCATCTGTCAGAGCAGAAACCAGCAGGGCTGCTATTCAGTGTGGACCAACTGGCAGAACTGGGCTGTGGAGAGCGCATTTCAGGCTGGGCTTCTCCTGGGAGGGCAGCTTGCTGGTGGAGGCCACGGCTCTGCTGCATAGCCAGGTGCTCTCCTTGTTTAGCTCGCCTTGACAAGCCCTCTCTCTCCCCCAGGCGCCTGCTCCAGACCCCTCTGCCCAGGGCGCTGTGGTCTGGCCAGAGCGTGGTGGGCCTCACAAGCTCCTCCTCTTCTCTGTCCTCCCCCACACCTGGGCTCAGTTGATTTCTGTCCTCCTAGTAGTCACCTCCAGACCCAGGGCTGTACCACGAGGTCAGCCTGAGCTGCTCCCCTGAGAGACTTTGAGTCCCTTGGTTCACGGAAAGTCGCCCTTCATGCGTAACAGCCATTTGTGCCAAAGCCCGTGCCTTAGGGCTTGTCGGGGACGAGGAGGGAGCGATAAGCCTTCCCCTCAGCTCTGCAGGAAGGCAAACCTTCCCTCCCCCACCCCAGTCCCACCGTCACTCACTGGAAGCTCAGGCTAGGACCCCCAACCCCATCTTCACATTTCCCTGTATCCTAGGACCTCAGGAGCCTGCTCATTGTGACCAGCTAGCTCCCCCGGGGCACGCACAGGCAAGTGGAATGAGAGAGGAGGCGTGTGTGATTGTCTCACAGTGGGACGCCCCCATCAAGGTCCACGGGTCTAAAGGGGCAAGGGAGGAGGAGAGGGCATGAACTGTCACCCCCCTCCCAGAAATAAAGTTTGTAACTTGGAAATTCCTTTCCGCCCTTGAAGTCAAGTTAATAATTGTGTCTAGTATGGAGGTGTTTGCTGGTTTTCTTTGGTATTTTTTCTAATGCAATAAACTCACTTCTGCCTGCTGCA EMBV3_41434 CCGATAATAGGAAGATATGCGGGAGAGGTTTTGAGATTTGTCGGTGGCATTGGCCTCTTC Gene GeneID:526460|TSPAN13:NM_001035362:35_cdna UTR3_Alt 3 NULL GeneID:526460 4 GENE TSPAN13 MGC128160 tetraspanin 13 EMBV3_43214 AACAGTAAGAGCCTATTTTACAAGATGGTGCAACAACTGGGTGAGGCTGAGGCCACTGCC Gene GeneID:100336999|LOC100336999:XM_002691929:2_cdna Constitutive 0 NULL GeneID:100336999 12 GENE LOC100336999 NULL ATP-binding cassette protein C4-like EMBV3_34090 GATGGACTTTTGGTGATGAGAAAGATTGAGACCCTCCACCTCTGCCACTGGAGGCCTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18860 CTCTCTATCTGCCAGCTTCTTCAGCTAAAATACTTTTAGAGGGGTGAGGGGAGAGAGAAA Gene GeneID:541099|MTPN:NM_203362:32_cdna Constitutive 2 NULL GeneID:541099 4 GENE MTPN MGC127565 myotrophin EMBV3_36058 GATGTGGGACATGTTGATTACACAGAGAAGCCAACCAAAGGTCAACTGAGTGATGGGGGC Gene GeneID:513606|POLH:NM_001034450:273_cdna Constitutive 0 NULL GeneID:513606 23 GENE POLH MGC127832 polymerase (DNA directed), eta EMBV3_41849 CTGGCTGTAGAACACCACGGATTGAATTGGAAGAGATGGGACCCTCGTTGGATTTGGTTC Gene GeneID:511294|RPF2:NM_001046083:20_cdna Constitutive 0 NULL GeneID:511294 9 GENE RPF2 BXDC1 MGC134144 ribosome production factor 2 homolog (S. cerevisiae) EMBV3_16159 GTCTCTGCTCGATAAGTGCCTCTATACCAACCACTCTCCTCACCCTGACATCTTGATACG Gene GeneID:523264|DHDDS:NM_001035346:191_cdna Constitutive 1 NULL GeneID:523264 2 GENE DHDDS NULL dehydrodolichyl diphosphate synthase EMBV3_18372 ACTGACACCCCTGCCCCTGCCCAGAATCAAGTGCCAATTCTCACTCTGGAGCCTTAATAA Gene GeneID:515576|DCHS1:XM_002693149:64_cdna Constitutive 0 NULL GeneID:515576 15 GENE DCHS1 NULL dachsous 1 (Drosophila) EMBV3_36642 AAAGAAGTTTTTTACAAAGAAAATAATTACTTACATTTAGCCACCCTCAGACATATCTAC Gene GeneID:616791|C5H12orf45:NM_001038689:82_cdna Constitutive 2 NULL GeneID:616791 5 GENE C5H12orf45 C12orf45 MGC133846 chromosome 12 open reading frame 45 ortholog EMBV3_19728 GAAGGAGAAAAGTGCCCCGGATCCTTTCAGGGTTAATTTATTCAAAAAGGAAATCGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39373 CTCTGGCTGAGTTTGGATGGCTCCTGACAAGCGTGTTGCCTACTCCTATACTGAGACATG Gene GeneID:505671|RFTN2:NM_001097986:73_cdna Constitutive 1 NULL GeneID:505671 2 GENE RFTN2 NULL raftlin family member 2 EMBV3_03935 CCCCGGGACGAGCCACCTTGTGTCCCTTTCCGCTGAGTCCATTGGAGGAATGCCATTAAA Gene GeneID:511614|AGPAT6:NM_001083669:53_cdna Constitutive 0 NULL GeneID:511614 27 GENE AGPAT6 NULL 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) EMBV3_36892 GGGACAGCTACACCCAGGAGGTGGTGATCATTGTGTTTGCCGTTTTGGTTATGCCCACTT Gene GeneID:510573|LOC510573:XM_002693775:48_cdna Constitutive 0 NULL GeneID:510573 15 GENE LOC510573 NULL similar to olfactory receptor, family 9, subfamily Q, member 2 EMBV3_36134 CCTTATCTCCAGCGTTTTATATCAGGCCACTTTGCAACTTCCTCCCCTCTCTGCTGTTGG Gene BVV0102_252707 + 0 NULL GK000015.2:84291509-84312813 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066446 1 XLOC_041159 NonCoding TCONS_00066446 XLOC_041159 NonCoding NonCoding - 15:84300622-84301738 - TSS50189 1116 4 TCONS_00066446_1 67 0.598566308243728 1 0 0 0 6.37855803586603e-07 0 0 0 1.95958273075256e-06 0 0 8.11099284945301e-05 0 0 0 0 0 4.73325998133726e-05 0.000357038861116643 0 0 0 0 0 0.000394583570289131 0 0 6.31315142868252e-06 2.62507298922765e-06 4.30338999940556e-06 0 1.3468252034517e-06 XM_005200861.1 GYG2 PREDICTED: Bos taurus glycogenin 2 (GYG2), transcript variant X1, 4e-102 376 92.31 0.231182795698925 0 noncoding 0 0 0 0 -0.167098846317178 0.154781811964473 -0.0509313942873893 0.652060682329513 TGGAAGGACTGATGCTGAAGCTGAAACTCTAATACTTTGGCCACCTGATGCGAAGAACTGACTTATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGTGGGAGGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCGATGGACATGAGTTTGAGTAAACTCCGGGAGTCGGTGGTGGACAGGAGGCCTGGCGTGCTGCAGTCCATGGGGTCACAAAGAGTCGGACACAACTGAGCAACTGAGCTGCAACAACGGATGAACTTGCTGGGCGGTTCGGCAGTCCCGAGGGGGCCTTATCTCCAGCGTTTTATATCAGGCCACTTTGCAACTTCCTCCCCTCTCTGCTGTTGGGTCAGCCTGTTTCCTGGCTGGGCCATCTCCATGGCAACGTTCCCCTGTCTGCATGTGGAAACTTGAGTGAGGCTCACCCCCCACCTAGAGAGATCAGTGGAGCGTATGCTGTCTGGGTTTGTTTGGCTGCCTGGGTCAGGGAACCCGCAGGACGGCAGCGGGATTGCTTTTTGTAGAAATATGTGTTTGTGGTGGACTAATTTTAGACCGACAGAGGGTCACAAAGATAGTAGAGGGAGTCCCGTCTAAAGTTTCCTCCACTGTTAAGGTCTTACGTGCGACGGGACACGTGTCTAAACTGAGAAACCGACCTTGGTACATCGTGCGTCACTGAACTCCAGACTTTTTGTGGATTCCACTCGTTTTCCCACGGGTGGTCCTCCCTCTGGTCTAGGATCCCACCCAGGGTAACACACTGAGTTGAGTTCCCGCAGCGTCCTCTGAGCTGTGACAGTTTCTCAGCTTTCCATTCATCACGACCTCTTTGGTACAGCCTCTGTGTGTTAGCTCTTTGCACGTGTATTTCTTGGGGACCAGGGCTGTAGTTGGGCGGCGGCAGGTGCTGTTAAGACACGTCTCTCCAGGGTGATGGACCTCAGGGATCCGTCCAGTGACCCGCTCTCCTCCTGGCTCTGGCACTCAGTCTTCAGGGTCTGGGGAGGTTGCTTGGCGCCTTTATGCTTTGGTTTTCTCAGCTGTAAGGCGGGGAGGGTCCCCAGAAGATTCTTGCAGAGATTAAACGCCTTGG TCONS_00062671 . 5' 9115 TCONS_00062671 . 5' 9115 EMBV3_32570 GCTTCCTTTGGAGTAGATTAATTGACCATGGGTTTAATTCTGGGGTCTCTATTCTGTGCC Gene GeneID:515418|CD1A:NM_001102024:9_cdna UTR3_Alt 2 NULL GeneID:515418 3 GENE CD1A MGC152638 CD1a molecule EMBV3_19688 TTTCCGTCTGTAAGCCTTCCTTCTTCCCAGGCAAAGGCAAAGGGGTTCGGGGTGTGGCTT Gene BVV0102_134132 + 0 NULL GK000012.2:34238237-34476109 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34979 GACAAAGCACAAACAGCTACAGTGCACAACACAGAGACAAGAACTGAGAGGCAGAGGCTG Gene BVV0102_104649 + 0 NULL GK000019.2:23357324-23376203 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095808 1 XLOC_057800 Coding TCONS_00095808 XLOC_057800 Coding Coding TLCD2 19:23373224-23378720 = TSS71337 4480 1 TCONS_00095808_4 264 0.0551339285714286 4 0.185441310282075 0.000388735365068272 0.000363356913335023 0.000477157077625483 0.00038925711745577 0.000312981855874673 0.000151705295787109 0.000256438829945721 0.000135238879759023 0.000371611245089554 5.43701292535712e-05 3.06587467732642e-06 2.39443340660176e-06 0.000162357685061438 0.000147446429242735 1.88089325054572e-05 2.35817852498793e-05 0 1.12013180328245e-05 0.000853949704547036 0.000536017880850793 0.00018160151604244 0 6.14334531304909e-06 9.35527833456261e-06 0.000897763311438653 0.00107883797063482 0.000421781063983299 0 7.30352782061408e-12 2.81824171209811e-05 NM_001192123.1 TLCD2 Bos taurus TLC domain containing 2 (TLCD2), mRNA. 0.0 2682 100.00 0.331696428571429 NM_001164407.1 TLCD2 Homo sapiens TLC domain containing 2 (TLCD2), mRNA. 0.0 1090 76.82 0.3140625 TCONS_00095808_4 sp|A6NGC4|TLCD2_HUMAN TLCD2_HUMAN TLC domain-containing protein 2; 8e-136 388 78.03 0.996212121212121 1 coding 0 0 0 0 0.00722488388729858 0.944088820441982 0.0385395904021593 0.46328559637937 AAGGACCCCGCCTTGCCACAAAACCTGCTCGCAGTCTCCGCAGCGGGGTGTTGGATGCGTCGGGGCTTAGAGCCTGGGAGCCCCAGGGACCGATCCGGACGTAGCCCGCCCGCCAGGCCATGGCGCCCTCCGGGCTCCTCGTCACTGGCGCCTCCTTTGCCGCCTTCCGGGGGCTGCACTGGGGGCTGCAGCTGCTGCCCACCCCGGGATCTGCCGCCCAGAACCGCTGGAAGTGGCGGAACATTTGTGTCTCCCTGGTGCACAGCTTGCTTACGGGGGCCGGGGCCCTGCTCGGGCTGTCGCTGTACCCTCAGATGGCCGCCGACCCGATTCATGGCCACCCTCCCTGGGCTCTGCTGCTGGTGGCTTTCTCTGTGGGTTATTTCCTGGCAGATGGAACTGACTTGTTGTGGAACCAGACCTTGGGCCAGGCCTGGGATCTTGTTTGTCACCATGCACTGGTCGTGAGCTGCCTCAGCACCGCCGTTCTGTCCGGCCACTACGTGGGCTTCTCTGTGGTGTCTCTGCTCCTGGAGCTCAACTCCATCTTCCTGCACCTACGCCAACTGCTGCTGCTCTCTCGCCAGGCCCCATCTCTGGCCTTCAGCGTGACCAGCTGGGCCGCCCTGGCCACCCTGGTCCTCTTCCGCCTGGTGCCGCTGGGATGGATGAGCCTGTGGCTGTTCCAGCAATGCCACCAGATCCCTCTTGCTTTGGTCATCCTTGGTGGAACTGGACTGGCCTTTGTGGGTGTCATGAGCATCAGTTTGGGCGTCCATATTTTGGTCAGTGATGTTTTGCGATCTCGGCCCTGCCCACCCATCCTTGGAAACAAGGAAGCCAGGGGCACCAGGACCGATTGTGATGGTGAGGCCATCACCAGGGATGATTCCACTCTCAGCCTGAAAGACTGAGCCTCAGGCTCCTCCTCTGCCAGGCCTGGGAGAGGGAAGACTAACACCAGGAGATGCTCGTCTTCAATGCACTATCCCCCAGGGACAAGGCCTGGACTTGGTTTTCAGTACCTCAGTTCCTCTTCCAGCTAACTCCTGCATTCCTAGGATCTGAGGAGAAATGCTAATATTCATGGATGATGGGAACCTGGGCAAGAAACTGGTGATGTTTCTGGTTCACTGAATCCCATCATCAGATTACTGCCCTTTTCAGCAAACTAATTCCAGAGGTACAGCCTGTGCTACCAATAAAGGGTAGTGGGAGACATGAAGCTGGATGAAACTGCCAATGGGAACAGAGACTCTGCTTTAGCACAGGAACAGATGATGAAAGTGGAAGTCCTTCTAGGATCAGAGAGAGATCTGGTCAGAAGGGGTGAAGATCAGAGAGAAGAGAGACCTCATCCATGACCAAATTATGGCAGAGGGAAGAGGGTACAACAGGTGCTGTGTAACCAGTAGGGATGGACATAACAGTTGCTAAGAGACAAGGAACTGGTGATGTTTCTGGTTCTCAAAACCATATCATTCTGTTTGTATTTCAATCTAGTCCAACTGTGTCCAGCATCCTCCTTTTACCTTTGTTTAGTGTCTTTGCACCTTTTCAAAGAAAGTGCAGATTCTTAGAGGATTTCTGAGATTCATTAGAGGAATGAGCACCTGGCTAGGTCTGTCTTCTCCAAACTGTACTAAAGTCAAGAGCCATAGCAGGAACTCAACCACCCATTCTGAGAGCCCCGTGTAGGGTCTTCCCAAGCTTGGGCTTTCATGGAAGAATGAAGTCAGAGGCAGAAGCAAATGAGGTGAGGCTTCCACTTGGATGCAGAAGCATTAAGGAATACCTGACTCTCTTCTGGGATTAATTTGAACGCTCTCCTTTCTCCTCTGCTGCTTCTACTTCATTTTCTTTTCTTTTTTTTTTTTTTCTATTGCAAAAGACACCTCCCTTCTGCAGGCAAAACATCCAGGTTGTGTGAACTGTAAGCAGATGAAAGTTGCAATTCCACTAAACAACGGGAAAGAAATAGATAACCCTTAATTATCCACAGAAAAGATACAGGAGACAAAAGCGAGAGAAAGATAAAAGCAAAAAGCTGAGCTAGAGAGAGACAAAGGGAATGAAAGAAACAGACATATGCAGACGGAAGGACAGATAAGAAAAGATTTGTTGCATAGAAGAGACAGAGACGAAGAGAGATGGAGGGCAAGACACAATCCTTGGCAGAAATTTCAAGAAAGTCTATTATAGATACTGAGAAGAACCAAAATCATAGAATTGGTTAAATGGTCATAAAGAAAACAAGCAAAATAGAAATAAAGGCTGATGGGAAAGGACCCCAGTGGTGGAAGATACAGATAGTCTAGATGGTGAAATAAGGAGAGTGAGTGAAAAGGAGGAACCACCAGATCCCGGGGAGACAGGTGGTAGTGGCTGATAGATTAGCAGAGTGAGAAGAAAGAGGTGGTAATAGAGACCAGTGGGGGACTTCCCTGGTGGTCCAGTGGTTTAAGATTCTGCACTTCCAATGCAGGGGGCATGAGTTCAATCCCTGGTTGGGGAACAAAGATCCCAAATGCTGCATGGTGTGACCAAAAAAAGAGAGAAAGAGGTGAAGATTAGTCAGGGAAGCTGAGAAGCAGAACAGAAGGTAGAGGAGGCAGTCAATGGAAAGATTCATTGACAGAAAAAGTGTGCAATATGTTGAGTTGGAGACCGGCAGAAAGACAAAGCACAAACAGCTACAGTGCACAACACAGAGACAAGAACTGAGAGGCAGAGGCTGGTAGGACGATGGGAAGTAAGAATAGGAAATGGGAAATGACACAGAAGAATAAGCAAAGGGACTGAAGAGAATCAGAAAAAAGAGGACGTGGGGGCAGAACGATGAAATAAACATTCAAAGAAAAGAACTAGGAAAAAGAGGGAACATATAGATAGAGGAAAAAACATAGAGAGGGGACAGAGAGAGAGAGAGAGATTGTGAGATATCCCCATCAAAGAGTCATTAAAACCAAGGCACAAAGGGGAAAAATGACAAATAGAGACAAGGAGAAACTGCAACAGTTGGAAGTAAGCACAGGCAGAAAATAAGAGCAGAGGGTTTGAATGTAGTCAGACTAAAACCAGAGATGCAAAGGTGTAGAAACTGAGATAGAGATTTCTTTTTTTTTTTTTTTTTTTTTGGTCATGCCATTTGGTGTGTGGGATCTTAGTTCCCTGACTAGGGATCAAACCTGTGCCCTCTGCTCTGAGAGAGTGGAGTCTTAGCCACTGAACCACAAGGGAAATCCCAAGACCTAATAAAGTAGTATCTTCAAAACTCAATTGTTATGTTAACCAAATGCCTTGATTAACAAAAACATTGTCTCGAGCTTTCAAAGAAAAATGTGACAAACGATGGGAGGAATCTGTTCCCAAACTATGTGTTGATGTCAATACTGAATCATTCTAATCCCTACACCTTTTCTTCAGTTGCTGTCATGAATTCACGGTTCAAGCGAGTTCCCCTCTTGGGAAAACTTGGTAGTATCTATGAAGGGTGCCCAAGATGGACAAAGGAAAAACCATCATAGAGGGAAATATGAGGTGAAAAATAGCTATTCCTATGGGTTAACTCTTAAAACATAGGAAGTGATTTAGCTAATTGAGGGGCAGGGGGCAGGATGTAAGTGGACACCTGGAGAATTTGGGATCACACACAATTTTCCATCACAGTGACCCAGTGAAACTTCAGAAGGGCGGGACTGGACTGTGATTATAATTGAGTAAGTGGACATCTCATCAACTGGTGTTATATGTATTGTGAACCAGGTATAAATGATGTGAATCAAAGAGGCATAGTCAGTTGAAAGCCTAGAAAAGAGAAGCTAAAAAATGCAGAGGTTTGCAGATGCTAAATTTGTTACAATGAGTTGGGTTGCCATGGTGGAGGTTGGCAGATGCTAAATTTGGTACAGTGAGTTGGGTTGCCATGGCGGTGCTCTAGCGAGCCTCACCATGGCCCAGTGAAGTGGTCCTCAAGACTGACTCCATACTTACCTGGCAGGGGAGATGACATGATCGCAAAGATTGACTCCGTGCCCACTGAGCTACTGGCTGATAACTTCTTTGTCCTTTGGCATAAGGGAGAGGATTTCCTGGATGGGAAGCATTGATATTTTATGGTTTCAGAACACTATCCTGATCAAAAATTAATAAACTGCTATGTAAATAAGATCATCAGTCTTTTGTGAATATGGTGACTTTGAGTCGCTTTTCTTGGCTCCAGAGGTGTCCTGGTTTATAATGTGATGCTGGCTTATGGAAGCTTTGCTGTGAGAAGATCTCTTGGCACTAACTCTTTAATCTACAAAGCCCTAGAGCCTCTACTCTGAAAAGGCGAACCAAACGTCTTCAGTAGAATGGACTTAGAGCAAGAGAAAAGATTCAGACAATTTAGAGTGATTCTCAAATGCCAAGGGTTGAATCCAAAAGAATTTTTAAATTTATCCTGAGTTAACAAGAAAATTAAACAGAAATATCCATA EMBV3_26084 TTCTGTCACGATGGATGGGAGCTCTGGATTTGGGATGGCGAGGCGTACCTAGTAACTGAT Gene GeneID:100336469|LOC100336469:XM_002696110:194_cdna Constitutive 0 NULL GeneID:100336469 19 GENE LOC100336469 NULL secreted and transmembrane protein 1A-like EMBV3_11538 AGCTCGTCAGGAGACTTAGCCAGAGGCCCACCACTGAAGAATTAGAACAGAGAAATATCC Gene GeneID:522158|PHACTR2:XM_002690297:37_cdna Constitutive 0 NULL GeneID:522158 9 GENE PHACTR2 NULL phosphatase and actin regulator 2 EMBV3_06378 GTGCCGAGCTTGAAGAAGAGTTGAAAACTGTGACGAACAACTTGAAATCACTGGAGGCTC Gene GeneID:281544|TPM1:NM_001013590:16_cdna Constitutive 0 NULL GeneID:281544 10 GENE TPM1 NULL tropomyosin 1 (alpha) EMBV3_28908 CCCCTGCTGGTTTCACTATGATTGGGTGGGACCAATAAGTCCAGAAGAACTAGGCCCTCT Gene BVT0101_081417 - 0 NULL GK000010.2:54422092-54498978 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33073 AAGGCCAAGGCTGCCGAAGCCAAAGCCACGCTCTGGAATGATGAGGTGGACAAGGCTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40383 ATCCTGCTCCATCTTGGACAGAGTGAATACCTGGAGAGGTGGCGAGAGACCTTCAGGCTT Gene GeneID:510325|KIAA1539:NM_001014893:41_cdna Constitutive 2 NULL GeneID:510325 8 GENE KIAA1539 NULL btKIAA1539 EMBV3_15347 CTTTATCATGGCCCCACCCAACCCCTAAAAGAGAGGGAACCCCAGAGGGCAAGATAGTTT Gene GeneID:100300326|LOC100300326:XM_002698199:746_cdna Constitutive 0 NULL GeneID:100300326 25 GENE LOC100300326 NULL hypothetical protein LOC100300326 EMBV3_26949 AGACTTAGGGGTCTAGAGTAAGGGGCGCAGGAGGCCGCCATCTTGAGTTGTGAGCCTGGT Gene BVT0102_416700 + 0 NULL GK000009.2:34358840-34364850 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236979 1 XLOC_144623 Coding TCONS_00236979 XLOC_144623 Coding Coding KPNA5 9:34313325-34363712 j TSS177278 5485 1 TCONS_00236979_1 539 14 0.891418251101496 0.000302271421756617 0.000468867998379225 5.46770396361291e-05 0.000342504340849257 3.22926620492349e-05 2.32833143847653e-09 7.57662651102517e-05 0.000244378925396042 7.88189028912469e-05 3.53295788760239e-15 1.29090605239003e-09 2.55472479188069e-09 4.59135490706482e-15 5.22990352226693e-12 3.08941846133434e-14 0.00048549811648603 0.000520272948979525 9.20864422977567e-05 0.00015291582016038 1.65881033556189e-05 1.35009076369649e-130 5.28452602058533e-05 7.50982963050516e-13 2.77448016849949e-05 7.13153046621304e-09 0.000154592190868079 2.94223828232917e-05 1.35100300136241e-11 1.83351559964692e-05 4.75299753777448e-13 XM_001252155.4 KPNA5 PREDICTED: Bos taurus karyopherin alpha 5 (importin alpha 6) (KPNA5), transcript variant X1, mRNA. 0.0 3568 100.00 0.360437556973564 NM_002269.2 KPNA5 Homo sapiens karyopherin alpha 5 (importin alpha 6) (KPNA5), mRNA. 0.0 2664 93.03 0.325979945305378 TCONS_00236979_1 sp|O15131|IMA6_HUMAN IMA5_HUMAN Importin subunit alpha-6; 0.0 1089 98.32 0.992578849721707 7 coding 0 0 0 0 -0.0428565526083712 0.714434003268369 0.000471198293830966 0.991784049683166 CTCCGCCCCTCTGCCTGTCGGTGCTGCAGCTTCGCTGCCGCCGCTGCAGCCACCGCCGCCGCTGCCGTGTGCAAGGACTTCTGGGAGCCCAGACTTAGGGGTCTAGAGTAAGGGGCGCAGGAGGCCGCCATCTTGAGTTGTGAGCCTGGTCTCTGTACTCATCGCTAGGGGCGGAGTGCTGACCCCACAGTTACCGCAGCAGCCACCACAGCCGGGGACTGGGAAGTCAGGGCGCCGGCTAGTGCCACATTAATGGATGCCATGGCTAGTCCAGGGAAAGATAACTATAGAATGAAAAGTTATAAGAATAAAGCCCTAAACCCCCAGGAGATGCGTAGACGAAGAGAAGAAGAAGGAATACAGCTTCGAAAACAAAAAAGAGAAGAACAGTTATTCAAACGCAGAAATGTCTCTTTGCCCAGAAATGATGAATCTATGTTAGAAAATCCTATCCAGGATCCAGACATCAGTTCCACTGTACCCATTCCAGAGGAAGAAGTTATTACTTCAGATATGGTTCAGATGATTTTTTCTAATAATGCTGATCAACAGCTAACAGCTACACAGAAATTTAGAAAGCTGCTTTCTAAAGAACCTAATCCACCAATTGATCAAGTTATACAGAAACCAGGAGTGGTGCAGAGATTTGTGAAATTTCTTGAAAGAAATGAAAATTGTACATTACAATTTGAAGCTGCGTGGGCATTAACTAATATAGCATCTGGAACTTTTCTGCATACCAAAGTAGTGATTGAAACTGGGGCTGTTCCAATTTTTATCAAACTTCTTAATTCAGAGCATGAAGATGTTCAAGAACAGGCTGTTTGGGCACTTGGTAATATTGCTGGTGACAATGCAGAATGCAGAGATTTTGTTTTGAATTGTGAAATACTTCCACCTCTTTTAGAGTTACTAACAAATTCAAACAGACTTACAACAACCAGAAATGCCGTATGGGCCCTCTCAAATTTATGTAGAGGCAAAAATCCTCCTCCAAACTTTAGTAAGGTTTCACCTTGCTTAAATGTCCTGTCACGATTGTTATTTAGCAGTGACCCAGATGTATTAGCAGATGTGTGTTGGGCCCTTTCTTATCTTTCTGATGGATCCAATGATAAAATTCAAGCAGTCATTGATTCTGGAGTCTGTCGAAGATTGGTGGAACTTTTGATGCACAATGATTATAAAGTTGTATCACCTGCGTTAAGAGCAGTTGGTAATATTGTGACTGGTGATGATATTCAAACACAGGTAATTTTAAATTGCTCTGCTTTACCCTGTCTTTTACACTTATTGAGTAGCTCAAAGGAGTCAATCAGAAAAGAAGCCTGCTGGACTGTTTCAAACATCACTGCTGGAAACAGAGCTCAGATTCAGGCTGTTATAGATGCAAATATTTTTCCTGTTTTAATTGAGATTCTTCAGAAAGCAGAGTTTCGCACCAGGAAAGAAGCAGCTTGGGCTATAACTAATGCAACATCAGGAGGCACTCCAGAACAGATCAGGTATTTGGTAGCCTTAGGCTGCATTAAACCACTTTGTGATCTGTTGACTGTTATGGACTCAAAAATAGTTCAAGTGGCTTTAAATGGACTTGAAAATATTTTACGGCTTGGAGAACAAGAATCTAAGCAGAATGGAATAGGCATTAATCCATACTGTGCCCTCATTGAAGAAGCATATGGTCTAGATAAAATTGAATTTCTGCAAAGCCATGAAAATCAGGAAATTTACCAAAAGGCTTTTGATCTGATTGAACATTACTTTGGTGTAGAAGATGACGACCCCAGTATTGTACCCCAAGTGGATGAAAATCAGCAACAGTTTGTATTTCAGCAGCAGGAAGCACCAATGGAAGGGTTCCAGCTTTAACTTGGTAGGAGGTAAATTAATGGCTAAGAAGGGTAGCTTTATATACCTCCCCTTTCTTGCATTGTCAGTAGGAATATTTGATGTGTTTTTGTGTAGAACAAAAAAAGAAAGAAGATGCACTTTTAGAAAGCAAAACAAGTTTCCATTCATATGCAACCTTTTATTATAGTTTTGTTGTTATGTTGGTGTGCCTGTATATATGTCTTTCATTGTTTTATCTTTTTTTGTATCTATTTGAGAACAGTTAAATACACTATTTAATAATTTAAGGCTGAGAAGGAGAATTTTGCTAAAGTATTACAATAATGGTTCTGAATTTTTCTAGCACTTGTGGAAACTGCACATCAACAGCACAGCTGTCGATAATTGCATTTTGGCAGTGTCTGACATTCCCGCTCTCTACTAAATCTACCTCTCAAAGCAAAAGCAAAACAAAAAAGCTTCAGAAGCATGAAATAGAGAAAAGGCTAAATTAGAATGTAAAGACAGATGTTACCAGAAATTATAAATCACTGTGCTGTAGGTTATACTTTGCAAAAAAATAAAAAGGTTTAACAAAACCAGTAAGAGTTACTTATAAAACATAGGAAAAATATTGTACTGATAATCAATTAAAATGTAGCAATTGTGAAGAGAGAAGCTGTTCTTCATATTGAACATATTAAAATAATTACACAACATTTAAATATTTGTGTTTTTAACATATAAATGCTATATTTTATATTTTGACCAAATATGCTAACATTTTTGAAATAGTTTTTTTTTTTATTTTTCACTGCTCATTTTAGAGAGCATCATGATAGAGATGCCATTATGAATCTAAAGTAGTGCTGCATAGCAAAAATAATACTGTATTCCTTTCTCTGATTTTTCAGAGCAGTAATTGAAAAGTTTCACTTTCTGTGTAATAATGAACTTAGGTATTTGAATGGCAAAATTGTCCTGAAGAAATCACCTTGTTATGTATTAAATTTTATTAAATGTACTTAATGTTTGGACACAAAAGGATGATATTAATGAAAATTACTAAGGATTCTTTAATTGGTTGAAACCTATATTAGGATTTTTTTTTCCCTTTGGTAATACTCAGAGGGTCATACTGCTGCTTGTCAATGTACCATTGTATTAGATTACATTTGTATCAGATTGGTTAATATAATGTAAGTGTTTATGTATTAACAGCAAAAACCTCTTCATATTGTGAAACTTTAAAAAAAATTTCAATAGAAAATTATATATATATTTATTTATAGATCCATATATATGCATGTGTCTTATGTGTTTTTTTTCACGGTACTATATTCGGTAGTTTTCTAAGCAGATATGGTACTGTTGAGCTCAGTCTTTTCATTTATAGTTATATACAGGCTATTTACATTTCCAGTTATATATCTAAAATACTTATTTAAAAATTAGTTTATTGCTGTTTTAAGATAGAAACTAAAAGCATTTTTGATATGACTCATAGTCTATTCTGTAAAGAAAGATTTCATTTATGGTATCATTTATAATGTTTCTGCTGGAAATCAGAGGCATGTTAACAAGAAGAAAATGTATACAGAGGTACTTTTAAATAGTATGACACTTTGTAAAATTATATATCATGAAACTAAGCTTTTGGCAAGACACTTAAAACCTACAGGCTATAGACTACAGGTTTAAATGGTGTCTGTAATGCTGACTGCATCTGCCAAACCTCTTTATATTGTTAAGTAGAGTATTGTATCTGTGCCCTTTTTATTGTAGTAGAAGTTATGAAGTTCAGTATATGTATATTCAAAAGAACAGGGTAGTTATATTAAAGATTACCAAACTGATGGTGAATTTATCAGATCAACACTTTTTTGTGATGCTGATAGTCTAAGTATCAGGTGACAGGGTATTCCACTCTTTCTAATCAATTGAACTTGATAATGCAGCATAATTCATAAACTAACCAGCTGTGCCTGCTTTTATTTTGAGGACCCTGTAGTCAGTTTAGGAGGTTTAGGTTAATAAATCTCTAAGCCACGTCTTTCAAACAAAATAGTTCTTACAGAAGGAAAAATAATGGAAATAATAGAATGGCCTTTAATTTTAAATTTTTGCCAGTAAAGCAAGCATTATACCTCTAAGTATAGAATTTGACCATATTTTAGGCATTTATATACAAAAATTTAATTCATTGGATCTGTTACTAGGATAATTGATTTGATTAGATTTGAATGCAAGGGGCAATATATAATTAATTGTTGGGATCAGCTATTGGTGTGGTAATAACTTTATTGAACCAATACTAGCAAATACTTTGTTTCTAAAATTTTTCTTAATATGACTACTCTTTTCAAATGTACTATTTTAAATGCTCCAAAATGTATTTTCCTTAATCTTCATTGGCCCTTGTGGGAAATTTTTTTCTTTTTTCAACTTGCTTTCCTAAGATTTATTATATTTAAATCCGAGAGAAACTGTGCCAAAAAAAAGAAAAGAAAACATGTTCTAAAGGGCAATGCATGCAACATTAATGCAGAAATAAAAAAAAAATACTTGAAAGAGTCCTTTACGTTTAATTAAATTTGGTGTTTTAGTTTTGTCTGAATTTGAATTTTTACTAGCTAACCTATGCAATTATGCTTACTTGTTTTATATTTGTAAGTACTTGACTCAATGACCTGGGTGTTTTTACTATCAGTTTTATTTTGAAAACTGTTTTTAGAATTTAATTTTTAGTGTCGTTTTGTTCACTTAATGGTAGCACTAGAACAGGAAAGCAAAAAATAAAAACAAAAAAAAATGTAATAAAATCTGCTGGCACAGAAACAGCATATCATTCGGTAACTGTAAAACCTATTTGCAGATAAAGATTGATTTGTTGATAAAGGACTTTTGTTGGACAAAACATTACCTTTGCCTTCATATTTTTTCTTCTCTTAAGAAGGAGCATTATGGAAAAAGTAATTACAATACAAAGTCTTAGTGGATTTTTGTTGCTGTTCTAAATTCAGCAGTCTACTTGCTGCTTTGTGAAACTGTGAAATCAAAGTAATTGTTAACCTTTACTCATTTTAGTTCATAGCATTACTGTTTTATAGAATGTAACATATTAGGAGCCCATATGATAGAGCTCTAGAAGGATAATGTGTCTTTAAGTTGGGAAGTGGGATGGGGAAGATGTTCTTGACTAACTAAAAAAACAACAACATTTGAGTAATATGCAATATTATGAAATGTTACAGCACTATATTAAAAACAATAAAATCCTATTTTACAATTGCATTTATATAAGTGTGTCTGTTTCATTTGTTCTCACTTAGGATTGTGTATTCCTAACAGCAAAAATAGATGCCCTCAATGATTAAAATTCCATCCCCTTTCTAGAACCAGTACGATTTCGTTGGTAGGACTATCTGATAAAGTAGTATGTTGCTTTTATTTTAGAACATATATTCAACTGTAATGGAGGATGTATCTAATTTATGTTTGTATCTCATGCCTTGGCAATTAATGGAACATTCACATGTTCAGCTGAGATTATTTTTCCTTTTCTATTATTTTAATGCAATACAGTGCATTTATTTAAGGCTTAGAGTTTTGGAAATAGAAGGGAATATCTGATTTAACTTTCTTAGTGTGC EMBV3_43088 AGGAGCCGGTATCACAGCCCTGCTTGCTCTCTGTCTCATCTTTGTGCCTTGGTCTCTTTT Gene GeneID:618463|SIGLEC12:XM_002695222:961_cdna Constitutive 0 NULL GeneID:618463 18 GENE SIGLEC12 NULL sialic acid binding Ig-like lectin 12 EMBV3_14033 GGAACCACTACTTGGACCTGGCCGGAATCGAGAACTATGCATCCAAGTTCGGACCAGGGT Gene GeneID:789390|NKD2:XM_002696468:99_cdna Constitutive 0 NULL GeneID:789390 20 GENE NKD2 NULL naked cuticle homolog 2 (Drosophila) EMBV3_08348 TGTTTGGTATTAAGCAAGGACACTTGAAAACTCACCAGCTATCTTTAAAGGCTTCGTTTG Gene BVT0101_029155 + 0 NULL GK000001.2:68233522-68262421 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000970 TCONS_00000978 TCONS_00000980 1 XLOC_000234 Coding TCONS_00000978 XLOC_000234 Coding Coding SEC22A 1:68155168-68235107 j TSS475 3350 1 TCONS_00000978_3 221 0.182089552238806 8 0.95819259926443 1.16449705300906e-07 1.09774053227966e-22 1.69067401462835e-09 0.000144598256060392 3.90965410990875e-08 7.98843797348237e-26 4.25974031703114e-25 7.02528346484856e-26 3.37391240892661e-05 1.0975096033463e-23 8.32410662316406e-28 0 1.21178564280228e-18 7.2456816267616e-18 3.46579205974058e-26 0.000321842730381746 2.8021161170599e-05 0.000691164745539287 5.48882287648323e-85 8.28775434911178e-95 1.7856268316616e-15 2.95611684878518e-09 0.000561157327578747 0.000200660106362207 1.74044255555056e-05 5.66200275316949e-38 1.65721656112981e-06 1.17648678319605e-71 7.33358748821978e-11 0.000187209641997474 NM_001083462.1 SEC22A Bos taurus SEC22 vesicle trafficking protein homolog A (S. cerevisiae) (SEC22A), mRNA. 0.0 2971 95.82 0.523880597014925 NM_012430.4 SEC22A Homo sapiens SEC22 vesicle trafficking protein homolog A (S. cerevisiae) (SEC22A), mRNA. 0.0 1086 95.70 0.201194029850746 TCONS_00000978_3 sp|Q8BH47|SC22A_MOUSE SC22A_MOUSE Vesicle-trafficking protein SEC22a; 8e-156 439 95.93 0.995475113122172 1 coding 0 0 0 0 -3.34271034133436 0.00812564394831661 -0.0196789023160397 0.7111255370001 GGATCTTCTCTGCTGGTGGAAATGTCTATGATTTTATCTGCCTCAGTCATTCGTGTCAGAGATGGACTGCCACTTTCTGCTTCTACTGACTATGAACAAGGCACAGGCATGCAGGAGTGCAGAAAGTATTTTAAAATGCTCTCAAGAAAACTGGCTCAGCTTCCTGATAGATGTACACTGAAAACTGGACGTTATAACATTAATTTTATTAGCTCTATGGGAGTGAGCTACATGATGTTGTGCACTGAAAATTACCCAAATGTTCTGGCCTTCTCTTTCCTGGATGAGCTTCAGAAGGAGTTCATTACTACTTATAACATGATGAAGACAAATACTGCTGTCAGACCGTACTGTTTCATTGAATTTGATAACTTCATTCAGAGGACCAAGCAGCGATATAATAATCCCAGGTCTCTTTCAACAAAGATAAATCTGTCTGACATGCAGATGGAAATCAAGCTGAGGCCCCCTTATCAAATTTCCATGGGTGAGCTGGGGTCAGCCAATGGAGTCACATCTGCATTTTCTGTTGACTATAAAGGTGCTGGTAAGATTTCTTCTGCTCACCAGAGACTGGAACCAGCAACTCTTTCAGGGATTGTGGCATTTATCCTTAGTCTTTTATGTGCTGCTCTGAATTTAATTCGAGGCTTTCATGCCATAGAAAGTCTCCTGCAGGAGGACTGAAATTGCCTTTTTGCATTTCTTTTTCTTGGAGTCAAATCTTTTTTGACTTTTGGTTTAATCTGTCTATGCATTCATGTATCTCTATGAACTGCGCAATCTCTGGCAGCTTTTTTTTCACGTGACTGTGGGAGCATTTGTTACACTACAGATCTGGCTAAGGCAAGCCCAGGGCAAAGCTCCTGATTATGATGTCTGACACCATCCTTCAGACATACTGCCTTGCCTTACAGAGGAAAAGGAAGGACACTACCACTGTGCTGAAGAAACTGCTCACCACAAATGAGAAGCTCTGCTTTCTTTCTCTCCAGCTGCCCTTTTTAAATCAGCGTGGCATGCCTGTGAGCATGCAATACCTGGTAGGCAAATTCCTCTCAGCAGAATGTTGGCCATGATTATCATTCAGAAGATGAGGACACCTCTCTACAGGGCAGTGGCAGTGGAAGAACAGTCAGATGCCATGGGAAGACTGGGCCAACAGCTCTGAATCATGGCTGGAGAATTCAATCCAAAAGCAGGTGTGGGACTTGCTCTGAGAACCAAGCAGGAACTCTACAACCCCAGTTTGCCTTTGTGAGGCATTAGTATAGACCAAATAAAAGATGCTGCAGTGAATTGGAAAGCTTATGTGTAAAACAAATGACTTACTAAATTTTAGATCATTTGCACATTCATTGTACCATGAGTTTATGAAGTCCAGATTGGTGTGGAATGGTTTCTTTTTCCTTTTATATTTTTGCTTGAATGTTAACTCTGGAAATCACCTGATGTAGGAGAAGAATCCCTGGAGCATCATAAGTATTGAAAACACAGTGAACATGTTTCTTTCCTAGACCACATTTACACCTTCTTTTGAAATCACTTTTTAAAAATATGTCATTTGGGCTATAGCCATTATTTGCCAAACTTCTATCACTTAAGTATTACATATGCTATTATTTACTTAATACTTATCTTTTAAATTTTAAAATATTTTAAAAAGAAACTAATCTCTACTCCAAGTGAAAAATCAGCATCAGTTTGCCATTAAAAAAAAGAGAACTACAGAATAAATTAAAAATAAAACAGGATGTTGTTAGATTCTAACTGGATGCTGATGACTGCCAAGGCTCTGAATCCAAGAAGCCTACTCCTTCTTGTTGAGGTAAGAGACGTTACCTAGCCCCAAATGGGCTCTCTCTGTGGAATTATCAGAAATGTAAAAGAAAATTACAAAGGGAATGACATTCACACTGTGATTCAACATTATTTAATTCTGTGTTGTGTATTGCCTAAAGTCATATCACATGCCACCAAGTGATCTGGGTCCTGCCCTGTGGAAACACTGAGTTGTTCTAAAAGAATCAGAAGGTAGCTCTTCTCTCAGCACTTCTTATTATTCCTCTTACTATTTCATGGCTTCGAGGAGTTAAGCACCTACTGTCTAAGTGGTGCTTTTCGATAACTTTGTAGATTGTTTAAGCAGTTGTGAATTATTAGAGGAAGCACATTTTACTTCTTTTAGCAAAATCTACTACTCTTCTGGTTTTGAGGGCTTCCCGGTGGCTCAGATGATAAAGAATCTGCCTGCAGTGTAGGAGACCTCGTTTGATCTCTGGGTTGGGCAGATTCCCTGGAGAAGAGAGTGGACACCCACTCCAGTATTTCTTGCCTGGAGAATTCCATGGACGGAGGAGCCTGGTGGGGTATAGTCCGTGGGGTTGCACAGAGTCAGACAAGGACTAAGAGACTAACACTTTCACTTTCTGGTTTTGAAATCATCCTCATGAGTGGTTTTCTTGAGGAAAGATTCCAATTAAGGAATTCATAAGGTTTAAAATTTGATATCCAGAAAAACAGTGGACTCATTACATGTGATTCATGTTACTGGGTATATTAATTAAGCAGAAAAAATTGTCCAGAGGGGTAAAGTCACCAAACTGCATTGTTTCCAGAACCAGTTTATATAGGTATGCTTATAATGAGAAATCCTGCTTAACTACAACCTTTTTGCTACACTCTCCTTTTTAGGAGAATGAGGCAAAAGAAGACAGTGAAAACTTATAATTTTGGGGATTTATTTAATACAAGAAACTCCAGTTCCCTCCAATTTTCTGCCCCTAACAAAACTGCAAAGAAATTATGAATATTCTGAGAGATGTACCCATCTCTCAGATGTACCCATCCCAAGGTACCACATGATCCTAAATCATCAAAATGAAATTGATTTATGTTTGGTGTTTTGTAGTTACTGAGCCACAAAGTTAAGTTGATTCACTTTACTTTAGAAAGTAAAACTTGAGAAAGTTTTTTAGAAACTAACGGTTAAAGCAAGAAGAGTTTTCTTGTAAATTGTTGATTAACCAGGAGATTGGAGTATTCTGGTTCATTGAGATTTTGTTGTATATTGATACTTTATAGCTCTCTTACCAGTTTGGTTCTTTTTATTATTGAGTCATAATGTTTGGTATTAAGCAAGGACACTTGAAAACTCACCAGCTATCTTTAAAGGCTTCGTTTGTTTTTCATTTAGTTTTTTCACCAGCTATTTTGGATAAGGGGATGTTTATATTTTAATGTAAAAAATGAAAACAGGTATAAATAATGTTTTATGTATAGAAATGTTTTCTTTCGTTATTTGGTGCCTGCATCTTTGCGTGTTTATACAGCTTTCCTGCCTCTGTCAT EMBV3_00276 GCAGGGATGGATGTGGAGTTGACAGTTGAAGCTGAATTTGCCACAGGGAATGACAGGAAG Variant GeneID:282125|YWHAE:NM_174491:31_cdna 207^482 2 EMBV3_11863 GeneID:282125 19 GENE YWHAE NULL tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide EMBV3_16144 CTAAAGAGCGCTAATCCTCTCCTGACCCCAATTCGCCCACCCTCGCCGGGAGTTGGGTCT Gene GeneID:100336494|LOC100336494:XM_002696358:23_cdna Constitutive 0 NULL GeneID:100336494 20 GENE LOC100336494 NULL zinc finger protein 131-like EMBV3_21439 GTGAGTATGGTCACCGTTGGTCTCATGGCCGCTCTACCAGCAGGCAAGAAGAATAGGGAA Gene BVT0102_009520 + 0 NULL GK000018.2:54145375-54169312 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086920 1 XLOC_052288 NonCoding TCONS_00086920 XLOC_052288 NonCoding NonCoding - 18:54165835-54167988 - TSS64600 2153 1 TCONS_00086920_4 133 0.820715281003251 1 0 4.42342405841783e-05 0.000436381324315561 5.50801661996869e-05 3.95594241335705e-272 1.0904190369515e-156 3.32271729019604e-06 2.5780167314566e-12 9.19047064611866e-11 8.26884877169169e-06 0 0 0 7.66150311625068e-11 1.40762660153491e-10 0 0.000137429490485318 0 5.36751489336646e-10 0.000286438013286492 9.60120038757429e-05 2.7046511927955e-05 0 0 2.80556721057092e-10 1.9749087476724e-05 0.000376653531265381 4.47334100565821e-05 1.98583814949562e-10 8.43532557470154e-11 0 NM_174233.2 AGTR1 Bos taurus angiotensin II receptor, type 1 (AGTR1), mRNA. 0.0 719 90.13 0.245239201114724 0 noncoding ACTTTGGCCACCTCACGCAAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCCGGATGGCATCATTGACTCGATGGACATGAGTCTCAGTGAACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCAATTCATGGGGTCGAAAAGAGTCGGACACGACTGAGTGACTGATCTGATCTGATGACCTTTTGGAAGGAAAGTTATGACCAACCTAGATAGCATATTAAAAAGCAGAGATTATCACTTTGCCAACAAAGGTCCATCTAGTCAAGGCTATGGTTTTTCCAGTGGTAATGTATGGATGTGAGAGTTGGACTGAAGAAAGCTGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGCAGAAGACTTTTGAGAGTCCCTTGGACTGCAAGGAGGTCCAACCAGTCCATCCTAAAGGAGACCAGTCCTGGATGTTCATCGGAAGGACTGATGCTGAAACTCCATTACTTTGGCCACCTCATGAGAAGAGTTGACTCATTGGAAAAGACCCTGATGCTGGGAGGGATTGGGGGAAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGTATCACCAACTCGATGGACATGAGTTTGAGTGGACTCCGGGAGTCAGTGATGGACAGGGTGGCCTGGCATGCTGTGATTCATGGGGTCGCGAAGAGTAGGACACAACTGAGCGACTGAACTGAACTGATGACCTTTTTCACACCCTAGAGGAGACAATAAAACTGATTCCAGGGAGAAGCGATGAAGAGGTGGAGTGCCGTTTCCTTCCCTGATTCCAGCTTGAGGCCAGCTGCACACTATCATGCCAGGATTTTGATTATATGAGTTATTAAAAATGTCCCATTTATCCCAAGCTGGTTTGAGTTGAGTTTCTGTCACTTACAACCAAAGAATTGTGATGGATGTGACCCAGGCTAAACTCTGTCTTGGTCGTCAGCGTTGGCCCTGAAACAGAGAGGGCTAAGGACCCAGTCATCATTTGCTGAACAAATAAGCAAAGGAAGTCACACACATGCTCTCTCTCCCTGTTTCTCCTGTCCGTGTCTTTGAGTCTCAGTTTCTACCAGGAAGACCTTAACTTCTGAATTACTTAGGCCTACGAAACAGTAGATGTACTACTATCAGCACGTTTGAAGACGTACTGTGTTCCAGGTACCATTTCACCTGCTTTGACTGTGTTAGTTCATATAACTCTTACAACCTCCCTATGAGTTTGTTACTTTCACTTTCCACCTTTTGAAAATGTTTTATTGCCACTGGAATTAGATGAGATCAGAGAGGTATAAAGCCTTGACCAAGAACAGAGAAGTGAAGTAGCTTGCCTATGGTCACACAGTAGGAGGCAGAGTCAGGATTTTAATGCCAGCAGTTTGACTGAAAACCCCACACTCTTAACCACATTATACTACAGGTGGGAGAGATCTTGTTTTCCATTATCCATTTTCTCTGTTTTCCAGCCTAATAGAATTTTAGCTGGGCACATTGCCATCCTAAGTAAAAATGACATTTCCTAACCGTCCTTGTGGTTATGAGTTCTCATTTGACGGAATTCTGGCCCAAAAGGATGTGAGCAGAAGTAATACGTGAAACTTCTGGGTATAACCTTAAAGGGACAGGACATACCTTCCCTATTCTTCTTGCCTGCTGGTAGAGCGGCCATGAGACCAATGGTGACCATACTCACCTGGGACTTTGATGATTTTCCTGAGGAGAGCCCACTTTTCCTTCCCCAGGGTCAAACTTTTATTTGAGAGGGAAATAAACTTTTATATTGCTTAAGCCACTGATATTTTGGATCACTTGGTTATAACATGTACATGTCCTCTCTTTGGTTACTGCCCTTGTTTTGGTGGAAGCCGACTTGTGCCTAATTTAGTGAGAGGTCATGGGGTTCAGGTGTTAACCAGTCATCATGTCCTACTTCCATTACCTCTGATTGCTTCAGAGCCAATTGTATGACTTTTTCTCTTTTTTAAAGTTTTTTTGTATTTTTTTGCATGTGTGACATAATTTACACTCAATAAAATACCACAGATCTTAAGTATTCAGTTGAATTGTGTACACCCATGTAACCAC TCONS_00084081 r 5' 1325 TCONS_00084081 r 5' 1325 EMBV3_28602 GAGCAAAAACGAAGTGAAAAGGCTGTGGAAGAGGCAGTGAAGAGAACAAGAGATGAACTG Gene GeneID:100297903|LOC100297903:XM_002687717:16_cdna UTR3_Alt 2 NULL GeneID:100297903 5 GENE LOC100297903 NULL hypothetical protein LOC100297903 EMBV3_41772 GGATACGAGGCTGTCATTAGTTTTTCTCTGAAGTGCCTGAAGGTAGGAAATGGGCCGGGG Gene BVV0102_203900 - 0 NULL GK000017.2:55506209-55550673 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077429 TCONS_00077430 TCONS_00077428 TCONS_00077427 1 XLOC_047058 Coding TCONS_00077428 XLOC_047058 Coding Coding BCL7A 17:55548466-55570858 j TSS57860 3473 2 TCONS_00077428_2 207 5 0.845116341387165 0.000487449541615192 0.000355874730392765 0.000634224465097411 0.000733585173593551 9.31525075863345e-05 0.000184172275372164 0.000249727705160649 0.000885832326641766 0.000198551633331133 8.36809566101346e-05 2.50701912577575e-08 3.48032432662163e-11 0.000547779779913702 0.000150616187451396 6.3199646835712e-05 0.00322591880346316 6.707658506835e-114 2.60988315273266e-07 0.00047277869580272 1.66607183785414e-08 3.34727576221702e-08 0.000266272278363467 0.000725100310851486 0.000271825949796544 0.00176472014498491 0.00100812857421766 6.41677542927501e-08 1.04665290369914e-07 5.15190862180193e-08 6.62124521522672e-08 XM_868214.5 BCL7A PREDICTED: Bos taurus B-cell CLL/lymphoma 7A (BCL7A), partial mRNA. 0.0 5270 100.00 0.841059602649007 NM_001024808.1 BCL7A Homo sapiens B-cell CLL/lymphoma 7A (BCL7A), transcript variant 2, 0.0 2385 75.82 0.976101353296862 TCONS_00077428_2 sp|Q4VC05|BCL7A_HUMAN BCL7A_HUMAN B-cell CLL/lymphoma 7 protein family member A; 5e-102 298 93.85 0.859903381642512 1 coding 1 1 1 1 -0.0412112686294934 0.793602134246645 0.0207580167764299 0.650304908057052 ATGTGGCCCACACCCCCCACCAGCGTGAGCAGGGGTCCACCCCAGAAGCCCCCTGGTAACGGGTTCTTCCTCGTCCTCTGCAGGGAGAAGAAGTGGGTGACTGTGGGTGACACATCCCTGCGAATCTACAAGTGGGTCCCCGTGACGGAGCCAAAGGTTGACGATAAAAACAAGAACAAGAAGAAGGGCAAAGATGAGAAGTGTGGCTCAGAGGTGACCACGCCGGAGAACAGCTCCTCCCCGGGAATGATGGACATGCATGATGATAACAGCAACCAGAGCTCCATCGCAGATGCCTCCCCCATCAAACAGGAGAACAGCAGCAACTCCAGCCCTGCTCCTGAGCCCAACTCAGCCGCGCCCGGCGATGGCACTGACACCAAGGTGGACGAGGCCCAGGTCGATGGGAAGGAGCTCCCCGGGGCTGAAGATGCTTCCGACGAGCAGAATTCACAGTCTTCAATGGAAAACTCGATGAACAGTTCAGAGCAAGTTGAACGGCAGCCGTCTGGAGATGCGGGCCTGGCTGCAGAGACATCCACAATCTCTCAGGATCTGGAAGGAGTGCCACCCTCCAAAAAGATGAAACTGGAGGCTTCGCAACAGAACTCCGAGGAGATGTAGACGCCGAGTTCAGTCCTCTGATCCACGTCTCACGGGAGATCCATCCGCAGGCTTAGTTGTTGAACAACCTCACCCGAGCAGATCCCTGTCGGGTGCAAAGGGAACTACTAACTTAACAAGTTTGCCAAGTGCAAATCCAAGAAAACCTAGAACGGCGTAACTTCTCAGACACTGAAGAACTTTCTGCTGTGAAGCAAAACACTCGAATCTTGAAGTGACTGTCCTGGGGAAGGCGGGGTCGACAGCTCAGGAGCGTCTGGACACTGTCTCTGAAGCCAAGATTACATTTGTGTTGCTGCTGTATTTTTTTTTTTTTTCCTCCCCACTCCTCTATTTAATGATATAAGCTATTTGAGGGTGGTACTGATCAGGAATTCGCTTTTTCATCGGGGCTTTTCACTGTTCAACCGATATTCCTTCCGCTTTCTTTTTTTGTGCCTTGTGCCCTTGAGGTGACCTCTGGCATGTTTTCCTGGTTGTTTTGCATCTCCCCTTACAAGTGCCCTCTTGGTTCAGTTCAGGCAGCCATTGCTCCGGTCCTCGAGTCTTTCTCCTCCCTGCCTCAGGACTTCAGCTGGAGTGGACCAGGCAGGGAGAAGGAGAGCTTGAGGCCACAGAAGAGCAGGACCTCCCCGGCCATCTGGTTTCTAGGTGCAGCTGGGAGGCTGCAGGACACACCCTGAGCCCTGGTTGGGGACAGTGCTAGCCTCCAGGGTCCGAGGAGTCTCAGATGTCTGGGCATTGTCCCCAGGGCTTACTTGAGGCATCTGAACTGGTGTTTCCAAGCCCACAGCTGCCCAGAGGGACATCAGAGCCCTTGGATTGTTCTGGCACTTCCCGCCTCAGCCCCTCTCCCCCATATGGCAACCTCCCACACCTCCGAAGACAGACTGGCTTCTGCGGCTGATGGCAGGACAGTCTCCTTAAGACGATAAAGGGCCAGAGGAGGCTGGGAGCAGACGTCAGGAATAGCTGGTGCTGAACTTTTTCTCACAGGACGTCGCTTGGATTTCAAATCCACAGTCACCTGCTGCCCTAGTCTACCTCCCCAGCTCCACCTGGCCCCATCCGCGGGGGAGGTGAGGTTGCAGTCGGCTGAAATCCAGAGTCCACTGGCTTCTTTCTGCACACTGTTCCGACTCCTGGAGCCATCAGTTGGATCGTGTCTCTTTCCCAGGATGCTCCGAGGGTCCCCACGGGGGAGCAGGCCTCAAGGGTTGGAACTTGAAGGCCGGAAATGAGGCCCCCGAGAAACTGGAGAGCTTTGCGCTCCTCCAGAAAGGGGGCCCTGGGGTCCCTCCCCCGCCTCCATCCCCTGCCTGCACTGGGACAGCTTCCTGTCACTAAAACGGAGAAGCACCTCTTCTCCCCACGCCCCCCACCTTGGATGAACTGCCTCACTGTTTGGTTCTGAGGCCTGGTTTGCTCTTAATTCCTCTATGGACTCCTCAGACCCTTACCCCTTCTCCTGAGCTTTCTTTACTGCACTGGAGTTCCAACTCCCTTTGAGTTGTGTGAGGGGGGAGGGGGGAGCTCCGGGTTTTGTTGGTTGGTTGTTGTTTTTTTTTTCTGTTTGTTCGTTTGTTTTTGTTTCTGTTCGGCCAATTGGTGCATATATTCAAGTCCCACCTTTCACGTGTGGATCTCTCTCCTGACCACCATGGGGAGTGTCTGCCAGACTCCATTTTCTAAGCGTTTCTGAGGGTGAGGCTCTTCTTTGTTTCTGAAGGGAGCCAATCTATTTCCTGCACTTCAAGAAGAATCAAAATGTTCCTGAATTTCAAATACCTCATGCAAACATGTCTCCTGAAGCAAGGGAAGGGAAACACACACACACACACACACACACACACACACACACACACAAACTTTGAAAATGGTCATGTTGAAGTTAGGATGCCAGAAGGTTTCTGTCTTAAAAAATCCTTATCAATTTTGCCCCTCAGGCAGTCAGTTCTGGGAGAACTGTGTTCTGAGTTACCTCTCAGCGTATCTCAAGGCGGCTTTACCTCCAGATCCTATAGAGTTAGAATTAACTTCCTTTCTTTGCAGCAAAACTCCATTTGGATGAAAGATGAATCTGGATCTCTATTTCCTCCTTTTTGTTTTTTTTGGGAAACGAGAGGTGACAAGCAAGACAGCCGAAGACGAATCACAACACAGGCATCCGTGGAAATAGCAGGGTCCCCTCGACAGGCAAGGGGAGCGGACACGGTTGAGGGTGAACACAAGATGACGCCCAGGATACGAGGCTGTCATTAGTTTTTCTCTGAAGTGCCTGAAGGTAGGAAATGGGCCGGGGGTCCGGACCGACTGGGCCCCACCACGGCCACGCCAGGCAGAGCGGCCAGTGGCCCTGCACCCCCATCCACGCCGGCCAGGAAGGCCTTCCACGCGGGATGGTGAGACTGCAAAAACCACATGTGCTTCCTCCCCCAACACGGCCCGCTCTTCAGGGCCACCGCCCTGCCCCACGCCATCCTGCGCCCCTCACCCCTTCTCCCACCACGGAATCTGAGACCTTTCAGCCGGCCGAGCCAGAGGCGGGGGTCCTAAGCGAATGCCTTCCGCCAACACCAGGCCCCGCAGCCTAAAGGGCTCCCAGGGCGAACTTAACTCCCCGCAAAACTTGAAGTTGGGGATGCTGCGGTTACACATTCCACAAAGTGCTGGCACTTACACCCATAACCCGAAGGCGGAAGACCGACTCACAGGTGGTGACCTCCCATTACCAACGATGTCATGGTTTGGAATGTTCCATTATCAGCCAAGGACCTGGTTAGAGATATAAAGACCTTTTTATTCACCGTTACCTAATTGTTTTTTTTCTTACGATTTTTTTTTTTTTT EMBV3_10433 CACATGACGGTTGGCTTGATAGCATCTGACTCACAGACACAAACATAGTTGAATTCCTCC Gene GeneID:530547|UFM1:NM_001046314:133_cdna UTR3_Alt 2 NULL GeneID:530547 12 GENE UFM1 MGC127692 ubiquitin-fold modifier 1 EMBV3_39467 CGCCGGCCTGGGCTGCGGCGGACGATAGCGAAACAACAGAATCTCATTTACTTAAATCTT Variant GeneID:512714|LRRC34:XM_002684932:90_cdna 109^413 4 EMBV3_27739 GeneID:512714 1 GENE LRRC34 NULL leucine rich repeat containing 34 EMBV3_10072 ATGTATGTGCTAAGTCGCTTCAGTTGTGACCAACTCTTTGCAACCCCATGGACCGTAGCC Gene GeneID:785528|CWH43:XM_002688250:155_cdna Constitutive 0 NULL GeneID:785528 6 GENE CWH43 NULL cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) EMBV3_17658 TCAACGCCCTTTCCACCTCTCGGCAGTGCGGAATCAACAGTGAGACCATTCTGAAACCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31339 TGTTTATTAATTAGGCCCACAAATTCCCATGACACCACCTGGCAAGAGCTGAGGGCCTGC Gene BVT0102_185656 + 0 NULL GK000007.2:66386170-66763337 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11661 CCTGTTTTCTGGGCCCCCAAGTGGGTGGACTATTATAGCAAGTATGGCTTTGGCTACCAA Gene GeneID:511891|LOC511891:XM_002689178:235_cdna Constitutive 0 NULL GeneID:511891 7 GENE LOC511891 NULL similar to Serine/threonine-protein kinase PLK5 (Polo-like kinase 5) (PLK-5) EMBV3_18985 ACGAGCATGTGCAGGAGCTGGAGAGCTACATCGACCGGCTGCTGGTGCGGATCATGGAGA Gene GeneID:535992|RAB11FIP5:XM_002691208:28_cdna Constitutive 0 NULL GeneID:535992 11 GENE RAB11FIP5 NULL RAB11 family interacting protein 5 (class I) EMBV3_37733 ATCGCTCTGGGGTCTTTCATTGCTGGTGATTCAGCCTCCTCAATGCCAGTTCGAATCCTT Gene GeneID:539510|GDF10:NM_001076167:32_cdna Constitutive 2 NULL GeneID:539510 28 GENE GDF10 MGC140700 growth differentiation factor 10 EMBV3_04935 TCAGTCACTAACCCCCACTCCAGCTCCTGGGTTACTTGAGTTTGTCCAAAGTGGTGCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39776 TTCCACTAAGCATGAGTGCCAGCATCAAATCTTTAAATCTGATTTTGAGACAGTTGAGAT Variant GeneID:510352|SPATA7:NM_001098928:100_cdna 348^945 3 EMBV3_24655 GeneID:510352 10 GENE SPATA7 MGC152639 spermatogenesis associated 7 EMBV3_29296 CGGTTGTACGCGCAGTCTGCCCAGTCGGATTTTTACACCTGCAGTGGAATTCAAGGAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06793 AGAGGACAAGCTAAGAGTCAGTAACCGCTCCAAAAACAGTGAAACCCAACTGAGCCGCTG Gene BVV0101_007514 + 0 NULL GK000007.2:87187630-88145108 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38879 TTCCTGGAGTCGGCCGGCTGGGACCTGCAGCGATAATAGGGTGACATCCTTCAGAGACCT Variant GeneID:526612|NSFL1C:NM_001034557:1162_cdna 117^214 2 EMBV3_02525 GeneID:526612 13 GENE NSFL1C MGC128316 NSFL1 (p97) cofactor (p47) EMBV3_18498 AGATGGTGCCAGTCTCTGTTTGGGTACAGTTGCACCAGATCAAGCATGAAGAGCAAGCAG Gene BVV0102_023989 + 0 NULL GK000004.2:94565769-94634226 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189547 1 XLOC_115586 NonCoding TCONS_00189547 XLOC_115586 NonCoding NonCoding - 4:94602657-94606502 - TSS141915 3845 2 TCONS_00189547_10 119 0.43927178153446 1 0 0.0005343210935583 0.000637663947559742 0.000685927046582289 0.000543171805862726 0.00092451804258787 0.000228857213277515 0.000215371141798583 0.000177672443917537 0.000227777282281127 9.63084046613138e-06 1.19073293061754e-06 0 7.46238628329557e-07 0.000105212458000798 0.000156947568442408 0 0 0 0.000372067187511177 0.000874380174815623 0.000103823042735203 0 0.000143158133486464 0 0.000461297059506327 0.000482219171925483 0.000200384613229172 0 0 0.000222038415031847 XM_005215584.1 SYBU PREDICTED: Bos taurus syntabulin (syntaxin-interacting) (SYBU), 8e-66 257 77.39 0.0871261378413524 0 noncoding 0 0 0 0 -0.357615346727939 0.155438140545246 0.0112710373655222 0.821600834332249 GGTTAGGATTTGGGGCAGGGGCCAATTCAGTCCCTAACAGTAGGGGAAGAAAGCACTCTTATTTTTTTTTAAGACTTTTTAATGTGGATCATTTTTAAAGTCTTTATCAAATTGGTTACAATAGTGCTTCTATTTTATGTTTTTGGTTTTTTGGCTGCGAGGCATGTGGGATCTTAGCCCTTCAACAGGGATCGAGCCCCACCCTCTGCATTGGAAGGTGAAGTCTTAACTACTGGATCTCTAGGGAAGTTCCAGAAATCACCCTTATCGTTTAAGCCCGGTCCTTTGGGATCTTCCGTTACTTGTGCTGCAGAACAACCTGATTCAATGACTGCCTGACATTATCTTGCTTACTTATTTGCTCATTTATTGACTCTCTCTCTCACTAGGATGTCAGCTTCATGACCCAGCCTGGCCTGTTCAATGCTGGATCCCTGGTGCATAGAAACATATCTGGCTTAGAACAGCCGCTCAAGCTACACTTCTGGTTTACATGAATCAGACAAGGCCATCTCTCCTGACTCTATCACTCCTGCTAATCACCCTCATGTTTTATATTTAAAAAGTAGAGTCTGATACGCAGGAAATGCCAATCCTAGGCAATCAGGAAGTTCTTCATGTTGGAGACCTGGTATCTGCACAATTTCAACAGAAAACCTTACTTTTTAGAGAGGTGGAAATCATATGTGGGTCCAGTCAGAGCCTCAGGGGTTTCCAGTTTCAGTCAAACAAGGAAGTGAGGATCAAAGAGAACCTGATGGATGCAGGCACTGACTCTGGCGTGAATCAGAATCACCTGGAACCTTGTTTCAATAATTCAGACGCCTGGCTCCACCGCTGAGACTCTGATTTAATGGGTTAACCATGGGGCCCAGGCCTCTGAATTGTTAACAAGCCACCCAGGTGATTTTAACAAGCCACCTGTGTTTTGAGAATGACCTGCCTAGGGCCTGCGGGAGGAGTCTGAATTGAGGAAGACGGCTGGATTCAGCTGCCCTGGGGCCGGGAGGGACAGAGGCCTGGGAGATGGTGCCAGTCTCTGTTTGGGTACAGTTGCACCAGATCAAGCATGAAGAGCAAGCAGTCGGGCTTCACTGGTGGCTCAGTGGTAAAGAATCCACCTCCCACTGCAGGAGACATGGGTTCCATCCCTGATCTGGAAAGATCCCACAGGCCTCGGAGCAACTAAGCCCTGGTGCCACAACTACTGAATCAGTGCTCTAGAGCCCAGGAGCTGCAACTACGGAGCCCATGTGCTGTGACTTCTGAAACCCTCGTCCCCTAGAGCCCATGCTCTGCCAACAAAAGAATCCACCGCAATGAGAAGCCCCTGAACTGCAACCAAGAGTAGCCCCTGCTCTCCTGCAACTAGAGTAAAGCATTTGCAGCAATGAAGACCCAGCACAGACAAAAATAAATAAAATTATTAAAAGAAAAAAGAGCAAACCATCACCACAGTTTAGGACCCGCACCCTCCAAGAGGCAGCCGAGCATTTGACCTTTCACCCTGCGCTGTGACCTCTGTGGTCATTTCTGGGAGAAAATATGGACGTGGCCTGAGTTGCTGTGAGTTCTGCTGTGGCTGGGGAGGATGTTCAGAACAGGAGATAGTCTGGCCTACTGCAAGTATCTAAAAATAGAGCCAAGCCAGCGAGAAGCCACCTGGGTAGGGACCCAGAGGCCCTTGCAGGTGATGGAGAGGCCTCTGAGGCATTGCAGAGACAACAGAGAGGCCTCGGAGGCGAGGAGTCCTCTGTAAGTCACAGCTTCCTTTCCACACTGCCTCTGGTAGCACCCACCGCGTCAGGCACCTACATGACTTGACCCCAAGAAAAAGCCACTCTTCTCCAGAGCAGCCAGTCAGGCTGGCAGGGTTCGGTCTCACTGCCATGAGTTGGGCCCCAGTGGTCCTTGGGAGCGTACCCTGGCACACCAGGAGGGCTTTGTTTTCAGTCCTAATAGGACGGGTCCCATGGAATAGCTGAAGCAAGTGCTTAAAACAGAGGGCCCTGTTTCCTGCTCCCACCCTGCCCCTGGCTCACCCTGCTTTCAGCCCCACCTGCTGTCGGCCTGCCAGGAAGCAGACAACTGACTGCACCTGGGCAGAAGGGGAGACATTATTGCAGTGAAAGTACCCAAGACGAAAGGAGCTTAAATAGATGTGTATGTCAGAAAACAGAGCTCTTGGAGGCATGGCTGTGTGTGTGTGTGTGTGTGTATGCACGCGTACATGCACTTTATCCTGGAATAAATTTTTATTGAGCATGTACCACGTTGATGAGGAGGAAATGGCAATCCACTCCAGTATTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTGATGGGCTACAGTCCATGGGGTTTCAAAGAATTGGACATGACTGAGCATGCATGCATGCACTATGTTGATAGTTCCATGCTAGGAACCATTTGAGTCCCAAAAGAGCATGCCTGGTCCCTGCTCCTGAAGAACTGACAATAGAAATCACTCGTTCACTTCCTGAGCCTGACTGTGTGCCAGGCACTATTCTCAGTGTCTTACAATGTCCTAACTCATTTCTTTTTCACAGCTATCTTCTGCAGTGGTTACAAGGTAGTCTCAATTATTATTATTCCTATTCTAAAGATGACACTGGGGCAGAGAGAGACTATGCTATTTGCCCTGGGTCACAACTTGCAAGGGATTGAGCTGGCATGTGAATTGGCACCTGGAGCTGGGCCATCACCCTGGCACTAAACTGTCCTCAAGGTGGTTGCCACAGCCTGGGGGCTAGGAAGATGCTTCCTGAGGCCCCTTCCTCCTCCTGGGAGTTCATGAAGTAATGAGATTGGTTTTGGTATAAAAATAGAGCCATAGGCTCTCAAGTTTAAAGGGAACTCAAATGGTGTGGCATGAACAACCCAGCCATTCTCTGGAACTTCGTATCCAAATAAGAGTCACCCTTTCACCTTTAGAAGTGATGCTGTCATGGCTCCAAACATTCTTGGCTTTCCAGTTTTGGAGTTGCTTCCAGATGCAGTTTTTGAGCACGACAAGAAGTCTCCAGAGAGTTACATTAAAAAAAAAAACACAAAACTTTTTTTTTCCAAACACAGTGTTATTCCCTACTTTATCCTACAAATTATTTTCCAGACTTAACTCTGAATACCTTTTAACTATTTCTGAAAGTCAGATCTGCTGTAAACTGTTCAGGGCTTTGCCACCACTGAGGTTACTCAAAAGAATACACCAGAGGCTCTAAAAGCTATTTCATGGGAAAAGTTAAACAAAATCAAACCCTCTGAGCAGTGGCAGCTTGGTTAGAGGTGGGCAGGAAGGTATCATCTCCTGTTGGGACCGTTGGAGGAGAGTTGGATGCCTCAATTACCCTTGCTGGTTAGAAAATCAATCTCACTGCCTTATGGTCATCTTTCGTCCACTCCTAGCAGACTAGGTTGTCTGCTCTGGAGGCACATGTCCATTTTGCCCACTATTGTTGTTCCAGCACCTAGCACAATGCCTGATATATAGTAGATGCTCAATAAACGCTTGTTAGATGAATGAATGAATTGATGCACCAAGTAATATTAGGAGCTTTAACCAGCAAAGCAAGATTGTAGGCAGTGTATATCTGTCGGGTATCATCAGAATTTGTAGACAGTTACCTCCCCAGAGAAATGAAAAAGAACACATTTGCCAGATGCAAAGTATTTCCCCTCAAAGTGGCTTCAGGGGTTCAGTGTGTTGCTGATGAAGACTCAGGAGGCCCTGAGGGCCATTCAAGGGTGTACTATCAGATTTAGAACTAAAAGGGCTTATAAGTGAATTAATGGTTTTGTAATTTGGTTAAGGGCTTCCCAGGT TCONS_00184901 . 3' 15622 TCONS_00184901 . 3' 19466 EMBV3_24656 GGACTTGGACAGCATCTTCCGCAGGATCAGACATCCCAGAGGCATCTCTCCTGGAGGATG Variant GeneID:534253|C7H19orf50:NM_001034605:59_cdna 304^350 1 EMBV3_31075 GeneID:534253 7 GENE C7H19orf50 C19orf50 MGC127866 chromosome 19 open reading frame 50 ortholog EMBV3_13916 CGGAGCCCTTTCTTTGCTGGGCCGTTCTGGGTGAAAAATTAGATAATTTTCAAAGCTGGA Variant GeneID:510950|KIAA1712:NM_001076833:26_cdna 165^269 3 EMBV3_27961 GeneID:510950 8 GENE KIAA1712 MGC143238 KIAA1712 EMBV3_02513 TATGATGAGATCCCCCAATCCAAGGTGCTCCCCACCAAGGAGGAGCCAGTGAACACAATT Gene GeneID:510910|CD84:XM_002685862:418_cdna Constitutive 0 NULL GeneID:510910 3 GENE CD84 NULL CD84 molecule EMBV3_15165 CCCGTCTGGGCCACAAGTTTGATCTCATGTTCGCTAAGAGGGCGTTTCTGCACTGGTATA Gene GeneID:538631|TUBAL3:NM_001103285:6_cdna UTR3_Alt 2 NULL GeneID:538631 13 GENE TUBAL3 MGC165684 tubulin, alpha-like 3 EMBV3_08799 CAAGTACATCGTCAAGACCATCCCAGTGAAGTTCCTGGGAGGCAGAGTAGCCAGTGGAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02653 CACAAGTGGCTAGTGGTTACCTTATTGGAGAGCGCAGGTGCAGAATCACCAAACCGTGGA Gene BVT0101_005182 + 0 NULL GK000021.2:33939820-34039889 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123768 1 XLOC_075320 NonCoding TCONS_00123768 XLOC_075320 NonCoding NonCoding - 21:33962874-33964273 - TSS92527 1399 1 TCONS_00123768_4 210 0.28734810578985 1 0 0 7.18259302887084e-06 2.64589800413735e-05 7.7165092902619e-05 0 4.85804426434205e-05 0 0 0 0 0 0 0 0.000114321985671685 0 0.000113273482415025 0 0 0.00071247896587971 0 0 0.000185649328569698 2.62303134314334e-05 0 0 8.05772056767868e-05 8.37620343610465e-06 8.23889301412951e-05 0 0 XR_246720.1 LOC101927501 PREDICTED: Homo sapiens uncharacterized LOC101927501 (LOC101927501), misc_RNA. 3e-09 68.0 88.46 0.0364546104360257 0 noncoding ACATGAAAATTTTAATGACATTTTAAATTATTCATGACGTTCTTTTACTTCAAACTAAGTCTTTGAAATCCTGTATTTTACACTCTTGCACATATTCATGCCGACTAGCCCCTGCATGGGAGGAAAAAAAGTTTCCTCTGCCCTCCCAAGGTTCAGTTGCAGAGGCCAGAGAATTAAATTGACAAAGGACAGATTAACAGAAGAAAAAAGTGTATTTCGTATGCATTCGGGAGCCAACAAAGGAAGTAGCTGGCTCATTAAATGATTAAAGGTTTACAAACCTAACTGAGGAAAAAATCGAGGGGAAATAATGGCTTCTATGGGAAAAAAAACAAATAGATTTCTTCAGGAATGATAAATGGGTTTTTAGGCGAACCATTGTAAGAAAGTTTGTGGTAATAATTGTCTATACAAGTATGAATGGTCTCTTGTCTTCTTTAGGGCCGTGAAACTCCCCTGGAGAGGGGATTTATGGTAGCCTCATTTCCCAGAAGCTGCTGCTTTTCGTCAGATAAGGGACGCTCCCAGGAGACTATTTTCCTGCATCTGTTGAATCTCAAATATCCTCAGCTTAAAAGGATCTTCATGCCAACTCTGTGGTTCCAAGTGGGTCCCCCACACTATATTTCAAGTGCTCAACAGCCACAAGTAGCTAGTGTTTACCTTATTGGAGAGCGCAGGTGCAGAATCACCAAACCGTGGAGTCCCCGGACCGGGCACCTCCTGGGGCTCGATGGGGCCAGCGTCCCTTCTGCGGCCTTCCGGACCTGTTCTGGCCCATCTACTGTCTGCCACAGGCGGGGACCCATTGCCTCCTCGGGCGCCTGAGGCTCAACTCAGGCTCCGACGTGCAAGCTGTGGATATTGCGCCGCAACACCTTTTTCAGAGCGCAAACCCGCTGTGGGGGTGGCGGGCAGGTCTTCCTTCTACCCAGAGGGTCTTTGTCCCGCCGCAAATCGGGAGAGGGGAGATGCTAGGATACTACAAAGTCATCTTTTTGTTCTGTGCGACTCACGGTCACCCAGGCCCCTCGGAGGGGAGGGTCTGCGTTCTGGGACACCTGGCTTTTTGCGAGCTCCACCGCTCAAGGAGAAAGCTCGGCTCTGGCCGCAGCCATTTCTTTCGGGGGTCGGCCCCTCGCCCCGGGCTCAGGGCGCACCTCTCCTGCCCCTAGTTGGATGGCACAGAACCCTCACGCAGCCCCCTGGTTTCACAGGTGGGGAAACTGAGGTGCAGTTCCTGTGCGGCCACGCCGTGACCCCTTCCCTCCAGCTGAATCGGTTTCCACGAAGTCCCAGGGGCCGCCCGAGAAAACCTGGAGGCCTTCCTGCCCTGAGGAGCCTGGGGAGGGAGACGCCTCGCTGACTCTCCGCTCCTCGGACACAGGCGGCGGGCGGG TCONS_00121060 . 5' 17727 TCONS_00121060 . 5' 17727 EMBV3_25279 AGTGCCTCGTCGTCGGAAGATGGTCCCAGGATGAACCAGATTAGATCAAGGGCTTGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11176 TCCTCAGCGGTGGATGTCAAAACCAAAGGCAGCTGTGGAGGCAGCGAGCTTAAGGATGCT Gene GeneID:531057|KRT72:NM_001075944:33_cdna Constitutive 0 NULL GeneID:531057 5 GENE KRT72 MGC139868 keratin 72 EMBV3_42074 TGGGGTAGACCACTGGGAGGCTTCAATATGGCCAAGATGTCCAAGAAACCATCAGAGCCT Gene GeneID:781895|LOC781895:NM_001144075:5_cdna Constitutive 0 NULL GeneID:781895 X GENE LOC781895 NULL hypothetical protein LOC781895 EMBV3_23144 AAGTTCTGGGTGAAGCCGGGCTCTCTGAGACCAATTTTTCAGAAATGACAGAAGCCACAG Gene GeneID:338072|SMARCAL1:NM_176666:44_cdna Constitutive 0 NULL GeneID:338072 2 GENE SMARCAL1 NULL SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 EMBV3_32409 GCCACTCATCATTGCTTCCTGTGTTGGTGGCATCTTGCATGCTTCTGTACACACAGTGGC Gene GeneID:100298605|LOC100298605:XM_002693649:230_cdna Constitutive 0 NULL GeneID:100298605 15 GENE LOC100298605 NULL similar to olfactory receptor 154 EMBV3_33902 TGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACACGGATGTATGTACAAGGAC Gene GeneID:537652|TRPS1:XM_002692745:65_cdna UTR3_Alt 2 NULL GeneID:537652 14 GENE TRPS1 NULL trichorhinophalangeal syndrome I EMBV3_25589 AGACTCTCGCACAAAGCTCTCCAGACAGAAAAACGATAGAAGAGGGTGTGTCCCCAAACC Gene GeneID:100140850|ZNF831:XM_002692265:1585_cdna Constitutive 0 NULL GeneID:100140850 13 GENE ZNF831 NULL zinc finger protein 831 EMBV3_29982 AGCACCTGAGCCTGTCAGCAAACCACCTGGGCGACAAAGATGTGAGAGCTCTGAGCAGAT Gene GeneID:505102|NFKBIL2:NM_001075188:38_cdna Constitutive 0 NULL GeneID:505102 14 GENE NFKBIL2 MGC140757 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 2 EMBV3_31404 CTGTTAGGGGTGCATCCTGCAGCTTAATTGGCTTAAAATGTCCTCTCCTTTGGTGTGGTC Gene BVT0102_190380 + 0 NULL GK000014.2:72525875-72678593 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204640 TCONS_00202656 TCONS_00098204 TCONS_00119315 TCONS_00119314 TCONS_00202657 TCONS_00119310 TCONS_00119312 TCONS_00119313 TCONS_00119311 4 XLOC_124496 XLOC_124016 XLOC_058450 XLOC_072869 Coding TCONS_00204640 XLOC_124496 Coding Coding - 6:20413972-20418826 - TSS153051 3148 2 TCONS_00204640_9 130 0.306543837357052 2 0.351741191015866 0.148505195416181 0.126002462205398 0.136800279474487 0.0993590771190472 0.130133882119036 0.0480536066423031 0.0760458575472801 0.114515044727616 0.17750770940019 0.0218214825413354 0.00281132127368957 0.00379017950592231 0.0240202229194392 0.0529367491886849 0.0398083188833594 0.0009935021033482 0.00224579179507347 0.0010368162934631 0.0998810081179903 0.0877740241495524 0.0433217597661745 0.000903736109012594 0.000777381793498529 0.00127469500945967 0.123708491525303 0.0914770614046789 0.0894469428108921 0.00130516825875574 0.00102207187226357 0.00196589778498949 XM_005203639.1 TPM3 PREDICTED: Bos taurus tropomyosin 3 (TPM3), transcript variant X14, 0.0 2928 90.58 0.64707750952986 NM_153649.3 TPM3 Homo sapiens tropomyosin 3 (TPM3), transcript variant 2, mRNA. 0.0 2233 83.14 0.64707750952986 TCONS_00204640_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-35 131 59.81 0.971698113207547 0 noncoding 1 1 1 1 -0.859087928639218 0.00683989089552069 -1.06405010848439 3.52673399974048e-05 ACTCAAAAAATGGGCCAAAGAACTAAATAGACATTTCTCCAAAGAAGACATACAGATGGCTAACAAACACATGAAAAGATGCTCAACATCACTCATTATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATTTCACGCCAGTCAGAATGGCTGTGATCCAAAAGTCTACAAGCAATAAATGCTAGAGAGGATGTGGAGAAAAGGGAACTCTCTTACACTGTTGGTGGGAATGCAAACTAGTACAGCCACTATGGAGAACAGTGTGGAGATTCCTTAAAAACCTGGAAATAGAAATGCCATACAACCCAGCAATCCCACTGCTGGGCATACACACTGAGGAAACCAGAACTGAAACAGACACGTGTACCCCAGTGTTCATCACAGCACTGTTTATAATAGCCAGGACATGGAAACAACCTAGATGTCCATCAGCAGATGAATGGATAAGAAAGCTGTGGTACATATATACAATGCAATATTACTCAGCCATTAAAAAGAATACATTTGAATCAGTTCTAATGAGGTGGATGAAACTGGAGCCTATTATACAGAGTGAAGTAAGCCAGAAAGAAAAACACCAATACAGTATACTAATGCATAGATATGGAATTTAGAAAGATGGTAATGATAACCCTGTATGGGAGACAGCAAAAGACACACAGATGTATAGAACAGTCTTTTGGACTCTGTGGTGGAGGTGGGGGATGTTTTGGGAGAATGGCATTGAAACATGTATAATATAAGAAACGAATTGCCAGTCCAGGTTCGATTCAGGATACAGGAAGCTTGAGGCTGGTGCACTGGGATGACCCAGAGGGATGGTACCGGGACGGAGGTGGGAGGGGGGTTTCAGGATTGGGAACATGTGCACACCGTGGCGGATTCATGTTGATGTATGGCAAAACCAATACAATATTGTAATTAGCCTCTAATTAAGATAAATAAATTAAAAAAAAATAAAGAGATTGTCATATTGGATTTATTTATTTTGGAGGGACTGGTTATTTCAAAAAGACATTTATCAATTTTCAGTATCAAAACAGTTACACTATTGGTTTTTTTTCTCCCAATTGGTCCCCAAAGAGACCACACCAAAGGAGAGGACATTTTAAGCCAATTAAGCTGCAGGATGCACCCCTAACAGACCTCACTGAAACCTCATCAAAAAAGGGGGATTGGGTAGGGAAAGAAACTTTAAAAGATCAGCACACTGCTAGCCCACAGACTGTAGAGAGCTCTCACAGGCAGAGGGGTGACCAGTTTGCCTCAACCCCAAAGAAGCAAAGTTCCAAAATATAAAAATTTACAAGTTTTGTACATACGCTTTTCAAGATTTCTCCAGCACTAACCAATACAAAGCACAGTGAGATGGCACTTTTAGAGACAGCAGCTTCAGACCCAGAAAAGGGTGATGAGATGAGTTTCATATGGCTAAATCAGTGGCAAAACATAATTTTCTTTCCTTTCTTTCAAGGAGGCAGGAGAGCAAATAAGTGGTCACTTCAATATAAGGGGCACATGATCCATTAGTAGTTGGGAACAGGGTAGAGCTGGGACAAGGATTTGGTCTCAGAGGTTTTACCATCTTAATTGTTTGGTCACTTCTGATGAAAAAAGAAAAAAAAAAAGTTGTCCAAAGATACCGTAAAGCTGAAAACCTGAACAGCACTTTTTTTTGGCTAACTCCTTCTGGAATCATCTTTCTGCTTTGGCAGGTACTTTTTACAGGGCAATGAGGTTTCCCCAAATGGAGCCTTTCTCTGGGCTGCTAGGCTCTCAGTAAGGCAGGCCCAAACCTTTTCCCTTTCTCTCTGGAGAAGGCAATTAAGCTGAAATGTTACCTTCCAAAAGTGAGAAAGGGATTAGACTGCTGCTTCAGTTCTACGGAATTATCTGGAATGTTTTTTTACAAATGGTTGTAACATCAAGAACAAAAAAGGTAATTACAAAATGTGTACATCACAACATGCTTTTAAAGACACTTTGCATTGTGCTCACATTCCCTTAAACGTTGTTCCCAAAGGTGCTCAGCCTCTAGCCCACCTGGAATCTCTGGGGAGAAGCAGAGACTGGCGAAAAGGACACAGGAGTAGGGGGGTGGTCAGCTTCGGGCAGGCTGGCCCCAGTGGAGTCGGAGTCGGGGTGAGAGGGAGGAGCAGCGGCAGGGCGGGGCTGGGGTGCTCTACATTTTATTCAGGTCAAGCAGAGTCTGGTTCAGCATCCTTTGTGTACAGAGGTCCTCCTCTTTGGTGCATTTCAGTTTATCTTCCAAATCATCAATTGTCTTTTCCAGCTTGGCTACTGATCTCTCAGCAAACTCAGCACGAGTCTCTGCCTCCTTGAGTTTTTCGGTAAGAATCTTTATCTCTTCCTCATATTTGTCTTCCTTTTGAGAGTACTTTTCTTCAGCAGCACTCAGACACTTCAGGTGCTGGTCCATCAGTCTGATTTGCTCACCCATCTTTCGGCAACGGGACTGTGCCAGCTCCGCTCGCTCCTCTGTGCGCTCCAAGTCTCCCTCAATAATCACCAACTTGCGAGCCACCTCTTCATACTTCCTGTGTGCCTCTTCTGCAATGTGCTTAGCTTCTTTGAGTTGGATTTCCTGGAGTTCCATTTTTTCTTCATCTTTTAAGGCTTGGTTTTCAATAACCTTCATAACTCTCTCGCTCTCATCAGCAGCTTTCTCAGCTTCCTCCAGCTTTTGCAGCGCAGTGGCCAGGCGCTCTTGAGCTCGGTTCAGCTCCTCTTCAACCAGCTGGATCCTACGGTTTAAGGAGACCACTTCAGCCTCAGCCTGTTCTCGGGCCCATCTTTCTCCATCCACTTTCTGCTGGAGGCGCTTGGCCCTCTCCTCTGCATCATCGGCCTGCTGCTGCAGAACCTGGATCTTGCACTTCATTGCCTCGGTGACAGCGATCGCGGCCATGACAGTGGTCCCGGCCATGGTCCCCACCCAGCTCCTGCTTGCCTTCGGGTTCCTGCCTCCTCCGCTCGGCGCTCGGCGTTGCAGCCGCTTCTCACCCAGCTTGGTTCCTGCAGGGTTGAACTTGTGGCCCACACTAGGCGAAGAGCATGCACAGTCAAAGCTGACAGTAGGAAGCTTGGGATACTTAGGAATGGTGGGTTGCAGTTTATGGGGT TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 35715 TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 30976 EMBV3_04895 CTGGATCGATGGAAGCACAGCAGCATTTAGGTGAAGAGATAGAGCCAGCAACACCCATCC Variant GeneID:527089|LAYN:XM_002692987:144_cdna 487^677 2 EMBV3_25168 GeneID:527089 15 GENE LAYN NULL layilin EMBV3_40220 GAGCTGGCTCATCGTCAAGGCCAACTTTGCATGACCCTAAATTCAACAGGTGTGTTAAAG Gene BVV0101_033104 + 0 NULL GK000012.2:88313549-88664344 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34926 CTCCCCTCTCGGTGTGTTCCTTTCGTTGGTAGAAGACTCGGCCAGAGAGGCCCGGAGAAA Gene BVV0102_244102 + 0 NULL GK000009.2:65859298-65961215 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235778 TCONS_00237555 TCONS_00235779 2 XLOC_144298 XLOC_144753 NonCoding TCONS_00237555 XLOC_144753 NonCoding NonCoding - 9:65872578-65874107 - TSS177572 1159 2 TCONS_00237555_2 180 2 0.242801047120419 0.000105149890818391 1.55022801691094e-05 0.00012808146775611 2.79174680464507e-05 0.00017933217771176 0.000791571631691157 0.00018467941447293 0.000552037923863255 0.00110373690220446 3.68529841884342e-05 2.0010461878377e-05 0 5.07508830816326e-05 0.000191110083712317 0.000325947383505693 0 0 0 0 1.24097195042738e-05 0 0 0 2.33152214180804e-09 1.19559584080444e-05 9.11837138431168e-06 1.35500358640673e-10 8.28738547470101e-06 1.61365368613594e-09 0 XM_005210912.1 LOC101907627 PREDICTED: Bos taurus double homeobox protein 4-like protein 4-like (LOC101907627), mRNA. 0.0 1492 100.00 0.712683347713546 XM_003846668.2 LOC100996350 PREDICTED: Homo sapiens double homeobox protein 4-like (LOC100996350), mRNA. 1e-18 98.7 71.81 0.159620362381363 0 noncoding 0 0 0 0 0.00665697131690365 0.948603991726882 -0.0291018414561805 0.595151151317372 NNGGGCAAGACGCCCCCAGTCGGCGTGGGCGGGCCCCTTGGTTCCCCCTTTGCACCCCCTCCCCAGCCCCCGTCGGGAACCTTAGGCTCCGGCTGCCCGGGCAGCCTTGGCCGAGGACCATGCTTCAGGGCACTCGGCGGCAAGGCCGGAGGAGGAGAGAGACACCCAGGGACATGCGTGTGTGGGGAGTGTGCGTGCACACGCACGCGCCCACCAGGGACCCAGGCACGCGATCCATCTGTGGGTGTATTCCTTAGAGCCCTGCCCCGGCGGCAGAGCCCCCTGTAGTGATTCAGGGGTGTGGGCCTCTCCCTCCCCTCCACACCCTCTAGGGTGTCTGTGCCGTGAACGCCCCACGGGCCTTAACGTCCTCCCCTCTCGGTGTGTTCCTTTCGTTGGTAGAAGACTCGGCCAGAGAGGCCCGGAGAAAGAGGACAGTCATCTCTCCTTCTCAGACCAGGATCCTCGTGCGAGCCTTCACGAGGGATCGCTTCCCGGGGATTGCCGCCAGGGAGGAACTGGCCCGTCAGACGGGAATCCCAGAACCTCGCATCCAGATATGGTTTCAAAACCGAAGAGCTCGGCACCCCCAGCGGAGCCCAAGCGGGCCCGGCAACGGCCGGGCCCAGGGGCCAGGCGGCGCACCAGCCACGACGACGACTCCTGCTCCAGAGGACCGAAGGGCCCCACCCGCTGTCCAGAGCACCTCTCCTCCCCTTCGCCCCTCTCAGCCACAGGAGAGCATGCCACCCTTGGCTGCAGCTGCTCCTTTTGGGGCCCCCACTTTCTGGGTGCCCGGGGCTGCCTCTGGGGTCTGCGTGGGCCAGCCGTTGATGATCTTCGTGGTCCAGCCCAGCCCGGCGGCCCTCCAGCCAAGTGGGAGGCCACCGCCTCCTCCCCAGGGAGCAGCTCCCTGGGCCGCGTGCTCCCCTGCCGTCACGGCCCCCGGGCTGCCTGGGCAAGGGGCCATCCTGCCGCCTGGGCAGCCGGAGACACACATCCCGCGGTGGCCGGAGTCACCCTCCGGCGAAGGCACGGCCCCTCCGCTGGAGCCGCAGCCCCAGGCCCCCAGCCTTCCAAGCTCGACGAGCCTCCTAGATGAGCTCTTGGCGGCCACGGGCGTCCCGGACACGCAGGCGCCTTCCCTGGGGGCCGCTGC TCONS_00237554 s 5' 13282 TCONS_00237554 s 5' 13883 EMBV3_11878 ACCTTGAATGTGAGAAAATGGGTGGTGCCTGCAAGTATCAGAACACCTGTGGGTGTGTCA Gene GeneID:100335926|LOC100335926:XM_002698620:14_cdna Constitutive 0 NULL GeneID:100335926 27 GENE LOC100335926 NULL hypothetical protein LOC100335926 EMBV3_14199 GCAGGTGATGACATTATATGTAAAAAGTTAGGGTGAAACATGGACTAGGAAACAGGCCAC Gene GeneID:539083|FGF20:XM_002698668:146_cdna Constitutive 0 NULL GeneID:539083 27 GENE FGF20 NULL fibroblast growth factor 20 EMBV3_23832 AAGTTGTCGAGACGCTTGAAGAAGTGGTAGTCAGTTGGTGAGAGGTCAGGTGACTATGGC Gene BVV0102_214140 + 0 NULL GK000018.2:15442610-15498690 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082433 TCONS_00148568 TCONS_00206016 3 XLOC_051008 XLOC_090448 XLOC_124808 Coding TCONS_00082433 XLOC_051008 Coding Coding LOC100847830 18:15444671-15479549 = TSS62178 1042 3 TCONS_00082433_2 88 2 0.970180921524214 0.000457003923942341 0.000274837585347344 0.000204262790017027 4.25036060085582e-05 2.84290013099165e-05 0.000250599548559381 0.000159504766435478 1.70288813534389e-05 0.000217698395928705 7.89730183181256e-06 6.26121136730519e-05 8.35011400507654e-05 1.7210197702884e-05 0.00055978400255501 3.45286131193276e-05 0.00134339403738663 0 0.00109561994520573 0.000357857529732466 0.00127333999622731 2.62202983252799e-05 2.49254507158637e-05 2.64127108715154e-05 0.000394179123168398 0.000219423916581639 0.000233270533695158 0.000770349436628376 3.22630622500905e-05 0.000104049623585529 2.0194633630846e-05 XM_005199052.1 BRD8 PREDICTED: Bos taurus bromodomain containing 8 (BRD8), transcript 0.0 888 81.03 0.880038387715931 NM_001243723.1 SETMAR Homo sapiens SET domain and mariner transposase fusion gene (SETMAR), transcript variant 2, mRNA. 0.0 996 82.17 0.929942418426104 TCONS_00082433_2 sp|Q53H47|SETMR_HUMAN SETMR_HUMAN Histone-lysine N-methyltransferase SETMAR; 2e-37 134 75.00 0.988636363636364 1 noncoding 0 0 0 0 -0.0794100395090351 0.528577373265272 0.00490128082814258 0.957042917900956 TTTTATATCATTGACTTACTCTGATGATTAAAAGAGTTGATATACAGTACTGAAAACAGGAGCTAAAACCAAACTATGAAAATTATATTAGACAAAAAGGAAATCGGAATGGTTTTCTTATTTGAGTTCAAAATGGATTGCAAAGCAGCAGAGACAACTTGCAACATCAACAACACATTTGGCCCAGGAACTGCTAATGAATGTACAGTGCAGCAGTGGCTTGAGAAGTTTTGCAAAGGAGATGAGAGTCTGGGAGGTGAGGAGCATAGTGGCTGGTCATTGGAAGTTGACAGTGACCAATTGAGAGCCATTATCAAAGCTGATCCTCTTACAACTACATGAGAAGTTGCCCGAGAACTCAACGTCGACCATTCTATGGTTGTTTGGGATTTGAAGCTAATTGGAAAGGCGAAAAAGCTCAATAAGTGGGAGCCTCATGAGCTGACCACAAATTTAAAAAAAAAGTCCTTTTCCAGAGTCGTCTTCTCATATTCTATGCAACAACAATAAACCATTCCACACGATGAAAAGTAGATTTTATATGACAGCTGTTGATGACCAGCTCAGTGGTTGGACCAAAAGAAGCTCCAAACCACATCTCAAAGCCCAACTTGTACCAGAAAAAAGGTCATGGTTTGGTGGTCTGCTACCTGTCTGATCCTCTACAGCTTTCTGAATCCCAGAGAAACCATTACATCTGAGACGTATGCTCAGCAAATCGATGCACTGATAAATGTAACAACGGCAGCTGGTATTGGTCAACAGAAAGTGCCCAGTTCTTCTCCAAGACCACACCCGACCGCACGATGCACAACCAACGCTTTGAAAGTTGAATGAATTGGGCTATGAAGTTTTGCCTCATCTGCCATAGTCACCTGACCTCTCACCAACTGACTACCACTTCTTCAAGCGTCTCGACAACTTTTTGCAGGGAAAATGCTTCCACAACCAGCATGAGGCAGAAAATGCTTTCTAAGAGTTCATCAAATCCTGAAACAGATTTTTATGCTACAGAAATAAACTTATCTCTCATTGGCAAAAA EMBV3_05889 GTCACAGATGCACTGACATCACATGGACAGCTTGGTGACATCACACAGAGACAAGGCGAT Gene GeneID:524990|PLVAP:NM_001035353:80_cdna Constitutive 0 NULL GeneID:524990 7 GENE PLVAP MGC127657 plasmalemma vesicle associated protein EMBV3_37833 TTCTCATCATATTCACAGTTCTGGGCTTCACCCACTTCCTTATGGTCCTGATCCGTGCCC Gene GeneID:615876|CEACAM18:XM_002695219:948_cdna Constitutive 0 NULL GeneID:615876 18 GENE CEACAM18 NULL carcinoembryonic antigen-related cell adhesion molecule 18 EMBV3_06565 GGCTCCAGCCAAAAGTCCCAAGGAGAGAACTAAGACAGAGAAGACAAGAGGGGACCTGAA Gene GeneID:783971|LOC783971:XM_002689805:106_cdna Constitutive 0 NULL GeneID:783971 8 GENE LOC783971 NULL similar to Uncharacterized protein C9orf144B EMBV3_26972 CGTCACTGAAAATGAATGTCAGAACTACAAGTATCAAAGGGAATACAGTGAATTTAAAAG Variant GeneID:527278|BECN1:NM_001033627:148_cdna 620^814 1 EMBV3_12632 GeneID:527278 19 GENE BECN1 ATG6 MGC126978 beclin 1, autophagy related EMBV3_29246 GCACAGCGGTCACCACAGGCCTAATTGGTGCGGGTGAGGGTCGTGAGCACTCTTGCTTTG Gene BVV0101_027199 + 0 NULL GK000017.2:74568737-74581114 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34338 AGGAACAGAGCACCAAGGGACTGTTGTTAGTTTATAGGGCCTTGATTAGATAGGTTATTG Gene BVV0102_259791 + 0 NULL GK000022.2:31517979-31616246 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35564 AGCTGCAACATTCCAGTGTTTGAACTGTCACCAACTCTTGCACCCTCGACACGCCCACCA Gene GeneID:537131|SMG7:XM_002694209:55_cdna UTR3_Alt 3 NULL GeneID:537131 16 GENE SMG7 NULL Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) EMBV3_12859 GGATATAGGTGAGCATAGTCCATACCACATGCTCTTGTGACCTTTGAGAGCAAGGCAGCC Gene BVT0101_044954 + 0 NULL GK000002.2:6916094-7139408 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25784 AGCTGACTCAGGAGATCTCGGTGCTGAAGGAGCTCAAGGAGCAGCTGGAACAAGCCAAGA Gene GeneID:520730|WWC1:XM_002689365:22_cdna UTR3_Alt 2 NULL GeneID:520730 7 GENE WWC1 NULL WW and C2 domain containing 1 EMBV3_41293 GCACTGCATGGTATCTGCATTCAGCAGTTTGTTCCTGCTGGCTGTTCAAAAGACAGTGCG Gene GeneID:100313446|MIR2404-2:NR_030918:34_cdna Constitutive 0 NULL GeneID:100313446 8 GENE MIR2404-2 bta-mir-2404-2 microRNA mir-2404-2 EMBV3_05261 AGCTGACGGCTGCGAGGGATTGAGACCAGAAAATGAGTTGCACCATTGAGAAGGCACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11066 AGCTGTTCAGGGAAATGAAAGGCATCCCCATCTACTGGCGCACAAAAGGGGAAAGAAACC Gene BVT0101_067141 + 0 NULL GK000005.2:115117267-115127018 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28013 CCTCCTGGATGAAAAAGGACCAGCCCACCTTTACGCTCCGACAAGTTGGAATAATATGTG Gene GeneID:615039|AKIRIN1:NM_001101236:301_cdna UTR3_Alt 2 NULL GeneID:615039 3 GENE AKIRIN1 NULL akirin 1 EMBV3_41400 ACCGCTCAAGAAAACTTAGCCAGAAAAACATTTACTACAGAGAGGTGGAGGGCGGGGAGC Gene BVT0102_173177 + 0 NULL GK000003.2:120295785-120316926 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171617 1 XLOC_103868 Coding TCONS_00171617 XLOC_103868 Coding Coding LOC100848697 3:120295716-120312015 = TSS127981 3012 1 TCONS_00171617_3 308 0.0351925630810093 9 0.815744263099767 0.00135063163241754 0.00055713516328581 0.000439349964841812 0.000206776624482339 0.000350782220166214 0.000237520450622662 0.000354316574574459 0.000462455970245941 0.000641793724888879 8.33283494331482e-05 1.29203592489106e-05 7.71644808647973e-05 0.000133366580222495 0.000260812784546467 1.14699311220312e-05 0.00176252901170137 0.00107484885000254 0.00220753183189297 0.000888032669778533 0.00130123839274199 0.000541230614463415 0.000921424429835904 0.000286307591708239 0.00164752001977467 0.00163550713297006 0.00131225458588823 0.00109907720355931 9.56691329046814e-05 5.31879104574646e-05 0.000111781446278916 XM_001253549.4 DUSP28 PREDICTED: Bos taurus dual specificity phosphatase 28 (DUSP28), 0.0 1752 100.00 0.322045152722444 NM_001033575.1 DUSP28 Homo sapiens dual specificity phosphatase 28 (DUSP28), mRNA. 3e-26 125 78.91 0.048472775564409 TCONS_00171617_3 sp|Q4G0W2|DUS28_HUMAN DUS28_HUMAN Dual specificity phosphatase 28; 5e-12 64.3 83.33 0.113636363636364 0 coding 0 0 0 0 -0.198387262950681 0.28679142540504 -0.104883814639028 0.0896572725863082 CGGGGGCGTCGGCCGCACCTGACGACCCAAAGTAAGACACCCGGGCCGGGCGCCCGGGAGCCGGCCATGGACCCGGAACAGGCCGGACAGCGCGCGGACGCCGCGGCGCCCCCGCCGCCTTTCGTGCGCGTCGCCTCCTCTCTCTTCCTCGGGAGCGCGCGCGCCGCGGCCGCGCCGGAGCCGCTGGCGCGCGCGGGCGTCACCCTGTGCCGGCAGGCTGAGTGCCCAGAAGTGGCCGCCGCAGGCTGGTCCTCCAGCCCTAGCCAGTGTCTCTGGGCAGCCCTTCGGCTGCAGACGCCCCATCCCCTGCCGTCCACCTCCGGGGCCTCAGCCCGCCAGCAGCGGCAGGGGCGTGCGGCTCTGACTCTCCTGGTGGGCAGCTATCAGAAATGGGCCCGGCAGTGGATGGCCAGCGACAGATGCCACTCGGGCACCAACAGGGCAGTGCTGCCCCCCAGCTATGGCGGTGGGATCACCTATGTCCGCAGAGCGGCCACTGAAGAAAACAGGCTGCTTCCTCCAAGCGCGGTGGTGGGCAGGGAGCTGGCGGCCTCCACGGCCACGGCCCCCCACATGCTCAGTGCTCTCCGGACGGCCTCGCACCTGCCACCTGCCACCTCCACCAGACCCGACTCTGAGCCCTCTCCCCCAACCTGCTCACAGCAAAGCCAGGCTCCCCGGCGAGCCGGCCTGCGGTCGGAACAGGATGGCTGGAGCCGCTCCCAAGGCTCCGGGTCTCGTCAGGCGAACCAGCAAGAACACCAGGCCCCCTTTGCACCCCTGCCCCCTAAGGTCCCCAAGGCCGCCGGCTTGGGCCTCCCGCCTCCTGGGAAGCAGGGAGAGAGGGTCCCGGCCCTCCTGCTGACGGTGAAGAGCGCCCGCCCAGTGGCCGAGCCCAACCCGGGGTTCTGGTCCCAGCTCCAGAAGTACGAGGAGGCCCTGCAGTCGCGGTCCCTCCTGCCCAAGGAGCCCTCGGGCCCGACTGAGCCCTAAGCGGTCAGCCCTGGAGGACGACCAACCAACTCCAAAGCAGGACGCTGGGGGGTCTCCTGTATCCTCGGGGTGGGAAGACGTAGTTCATGCACTGACGGGAGGCTGGGCCATCCTCTCCTGCCTCACGTCCCACGGAGTTTTCATTTTCTGTAGCTCCCCAAAGCCCTCTGTCCCCGCTTGATGGTAGCGTAGGGGTATGTCCGCAGAGAACTGGGGAACTGTTCCTCCCCTGGTTCTCAGGTTTACTAGACAGGGCTTGATCAGGAACATCAAAACCACTCAAGAAAACTTAGCCAGAAAAACATTTACTACAGAGAGGTGGAGGGCGGGGAGCCAAGGTCAGGAGATGGGGAAACCACAGGAGTCACGAGGACCTGTCACCTTGACCCTGGCTTCCTTCCACATTCGAGCCTGCCACCAGCTCAGGCCACAGTGGCTTTCCAAACAGACTCGTAGCTGCTGTGACTCACGGGTGTGGGTTCGAGGCTCTGTGACAGACCGCTCAGCTTGGGCTCCCAGTGTCCACACCCACTTCCTACCTTACTGACCTCCCAGTTTCAGCCAAGGTCAGGCCCAGACCACACTGACCACCCATGTGTCTGAGCGCGTTGATTACCCTGGTTCAGAGGCACCTCATCTGGGCATCCTACAGCCTGAAGACTATACTAGAAAATTAATCACCCTCAACACTCCTTAAATAAGATAAAGAGGAGAGAGTAAAGGAAAAGACAAAGGGGAGAGAGTAAAGGAAAAAACGGATAATACATGAATTACAGATAATGTAGTCCCTGGTTAACACATCTGAGTGTACACGTAACAAAGTAATGGATAAAACACCGAATCTGGTGTTTATCATTTCCCTTGACCCGCAGCCAGGGCCTCAGGCCCTGGTCCTCCTAGTGGGTGTGTGGAGCCTTCATCCTGAAGGGCCGAGCGTCCTACCTGCACTGTGCCCTCTGTGATCCCCTGCACAGCCCGGGAGTCCTGAGCAGCATGAATCCCAGCAAGCAAAGCCCTGCCGCCTCTTCAGAGTCAGGGTCAGGAAGTTTCCTTGAGGTCAAGTAGTTAGGATTTGGTATTTTCACTGCTGAGGCCTGGGGTCAGTCCTGGTTGGGGAACTAGGAGCCTGCAAGCCGCACAGCACCGCCCCCCCAAAAAAGTGTCAGTCACCAAGCAGAGCAACTCTGATTTGTGCCTTGAGGATCCCCAACTGGCTAAGTGGGGTCTCAGCGTCCTGTCCCAAATGGAAGCATCCCACCTGTAGATGAAGACCTCTGACCAAGCAGAGCCCAAAGGATAAAGCTGGGGAGCATGTACTCCATGAGTGAGGCACTGGGGTGGTTGTGAACGGGGGGCCCATCCTCCCCAGCCTTCCTGCTCCTGCTCCTGGTTTGCCAGCATGATGGCCCCTGGCTCAGAGCACACCCCACCCCCTGCAGGCCAGCACCCAGCCCTGCACAGCGCCATGCATCAGCAGCGCCCATTTCCAAGAGCCACAGCCCTCGTCATAACCCGACTTCTGCCACCTTTATGGAGGGCTTGCCAGCTGCCGCCTACTCCCCGCAGGCCCCTCACAGCTCATGTTGCCTTTCCATCTACCTGTGAACAGCTCCTGCCATTATCTGCACATGGCAGGTGAGGCCACAGTGACTCCATCTGTGACCTCAGGCATGCTGAGTGGTTTGCCCAGCTGGGAGGTCAGGAGCCAGGACCCAAGCCCAGGTCTTCTCCCTGTGTGCTCGTGGTGCCCTTGCTGGCACACCCCCTCACCTGCTGACGCGGCCCTGGTGACACAGGTGCACAGCCGTCAGAGCCCGGGCCAGCCCTTGGTCCCCCAGCTCCATCTGGGGAACCGTCCAAGTCTGCCTGCACCAGAGGCCCAGGGACAGCACAGCCCCCACCCGAGCCCACGGGCCTCCTGGAAGCCCACCCACCACCGTGTCCGCCTGCTAACAGACGAGGCCCGGGACCCGCTCCCCTCCCGGGGCCTGCACACTCGAACAGGGGCAGCCAGTCTGT EMBV3_38858 GTGTTACTGAGGTCAGAGCATGATTTGATAATAACTGTGATGGCATATCACACCAGGGAC Gene GeneID:511743|UGT2A3:NM_001098944:29_cdna UTR3_Alt 2 NULL GeneID:511743 6 GENE UGT2A3 MGC139210 UDP glucuronosyltransferase 2 family, polypeptide A3 EMBV3_12638 TCTTGAGAAGAAGGCACAGCGTTTGAGGAAAGGAGAATATGTGATGCTTACGTAGGACTC Gene BVT0102_083974 + 0 NULL GK000014.2:17952250-18015437 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051423 TCONS_00051421 TCONS_00051424 1 XLOC_031190 Coding TCONS_00051424 XLOC_031190 Coding Coding FBXO32 14:17926252-17957218 j TSS38348 6285 1 TCONS_00051424_5 210 0.0120922832140016 8 0.797287259809462 0.00331780715870085 0.00160630101692793 0.00201629269758071 0.00282126747900884 0.0014857957080213 0.000433639238131685 0.00205110733767119 0.000545482580976424 0.00124557485706525 3.67724221450823e-05 0.000193761682516981 0.000195516500949071 0.000662900295842965 1.17402388678618e-06 0.00157790287979884 0.00156508972288163 0.000121582745378889 0.00275454986824812 0.00409778853477574 0.00380325097414628 0.00140477896352089 0.000550187106245228 0.000438267865629575 0.000405577805487074 0.0035023737495835 0.00261549159666734 0.00334320933985674 4.21406235584157e-05 0.000141190852381927 6.76769690859038e-07 NM_001046155.1 FBXO32 Bos taurus F-box protein 32 (FBXO32), mRNA. 0.0 2271 99.92 0.200636435958632 NM_148177.2 FBXO32 Homo sapiens F-box protein 32 (FBXO32), transcript variant 2, mRNA. 0.0 2554 72.68 0.702943516308671 TCONS_00051424_5 sp|Q2KHT6|FBX32_BOVIN FBX32_BOVIN F-box only protein 32; 3e-154 436 100.00 0.995238095238095 0 coding 0 0 1 0 -0.0618733963090749 0.585302635082071 -0.0480037233878782 0.340184195869533 CATTGACAGAGGTTACAGGGATCTCTGCACTCAAAAACGTGGTTGTGCGTTTTAGGAATTTCCACCAAGAAAAATGGATCTATGTTCACAAAGGAAGTACTAAAGAGCGCCATGGATACTGCACTCTGGGGGAAGCTTTCAACAGGCTGGACTTTTCAACTGCCATTCTGGATTCCAGAAGATTTAACTATGTTGTACGGCTGTTGGAACTGATAGCAAAGTCACAGCTCACATCCCTGAGTGGCATTGCCCAGAAGAACTTCATGAACATTTTGGAAAAAGTGGTACTGAAAGTCCTTGAAGACCAGCAAAACATTAGACTAATAAGGGAGCTCCTGCAGACCCTCTACACATCCTTATGTACCCTGGTCCAAAGAGTCGGCAAGTCTGTGCTGGTGGGGAACATCAACATGTGGGTGTATCGGATGGAGACGATCCTGCACTGGCAGCAGCAGCTGAATAACATCCAAATCACCAGGCCTGCCTTCAAGGGCCTCACCTTCACAGACCTGCCTTTGTGCTTACAACTGAATATCATGCAAAGGCTGAGCGACGGGCGAGACCTGGTCAGCCTGGGCCAGGTGGCCCCCGACCTGCACGTGCTCAGCGAGGACCGGCTCTTATGGAAGAAGCTCTGCCAGTACCACTTCTCCGAGCGGCAGATCCGCAAGCGATTAATCTTGTCCGACAAAGGACAGCTGGATTGGAAGAAGATGTATTTTAAACTTGCACGATGCTACCCACGGAAAGAGCAGTATGGAGACACCCTTCAGCTCTGCAGACACTGCCACATTCTTTCCTGGAAGGGCACCGATCACCCGTGCACAGCCAATAACCCAGAGAGCTGTTCCATTTCACTTTCACCCCAGGACTTTATCAACTTGTTCAAGTTCTGAATCCCAGCACATGACAGCACTTCAGAAGGGTTCCCCTGATGATTGGATGGTTGGGAATCCAGAGTTTGGACACTTCATTTGTAAATAGTGTACATGTTAAACATTGGCTCAAAACTTCTGAGATAAGGGACACTGGAGGGGAGACATACAGCTGCTGGCTGGAAGTTTAAGCATATGGACTTCTCATTAGAATTGGTATGGAAAACAGAAATCCTGTAAATAAACTTTTTTTCCTAACAATTTGCCAGCAAGACTATAAGGCAGGAATTCTATTTCATCGGTGAAAATGGAATTCTCTTGAAGTTCACTGCAACTCCTTGATAGTTCCCTAGAGTTGTGGAAGAGAGGGCAAAACTCGAATACAAAATAGAATGCTCTTTGTTTACAATGTGAAAATTTGTTGGGGAGAAAAAAAAAAAATAAGAAGAAAAACTACATGTGAGAAACCCCTGGGCTTTGGGTTTTGATTTGGGGTTTGTTTGGCAAAGGCAATGGAAGCACCACTCATCTTAAACCCACATGGGTGTAGATAGGGCCTTATCTTCCGAAGACACCGCACAATAGTCTACCTCGGAAAGCTGCAACGCTCGCTCTGACAAACCGCATGGTCCAGTAGACGGCCTCTGTCTGTTTTGTGTCTTCATCAAAAGTGAAACAGGAAGAGAGATTGGAGGCATCCTTCCTCATGCTTCAGGCTTCCCTTTTAGACGAATGGGGCACTCTTTGGGGTTTCTTCTCTTTGAGAACAAACCTCAAAGCACGTATGCCTTTTTCCCTTTCACGTTGTAGCTTATTTCGTGCAACATAAGGCCAATTAAAAGCAGTCCCAGAGGAAATCCTGCTGCAGGAAAAATGGAACGAGTCACCCAATAGCCATGAAGATTTTCTTATTCCTGTTTAACCTCTTGGCTTGTCTGGGCTTCCTAGGGTATCTTGATGGATAAGCCTGTCTCTGGGGACTGTTTGGAGCCAGAGGCCTGATAAAGACTTGTAGAACAGGTTTTACATATCAGCTGCTGTTCTTCTTGATGGGTGATGAGTTTTCTTTACATCCAGCACCGAAATTTAGTCAACCTGAGCTAGGGCTTCTTACGAGGTTGATAAAGCCTGGTGTTCTAGCCAGACAGGGAGTGGATGGAGGTACTTTGAGTTCAACCCCAGGGGAACCTGCTAGACAAATACCAACAGGTAGTTATATGTGGAAGAAGGAAATCTCAGGACTTAAGGAGTCAATATTCCTGGGGGGTAGTGGGGAATGTTTTTGTTTTTTACCTTTTATAGAACTTTGCTTTTCTACAACAGTGTATATATTTTTGCAATTGTATTTACTTTCCTTTTTTTTTGTACGTAAAGTGGGCACCCTCCATGATCTTGGCCAATGAGTGAAGCAGAAATAGGAACTTGGTCCACATGTATGTTGAGCAACAGTGTATTTTTAGGGATTGAATTGGGGGTGACCTGAAATGGGGATAGATGGTTAAGAACGTACAGAAACAAGCCAAGGGACCAGCTACTGATGAGGGGCCCCTTCGTGCCCTTCTCTCAAAGCACAACCCAAGTACCAGTATCTGGAGAAGAGCTTGACCACTAGTTGATGTTTCTCACTGTACAAGGTCTGTGCCTATGGGTTTCTCAATATCTTTTTTCCATCATCATCCCCCCCTAAGAGGAAAAAGGTAAATTGTATTTTAATTTTGAGGGAAAGTAAATATTAAAGAATAAGATCATGTTAGTTAAGGTTGAGCTTTGGAGGGTCACAAACCATTGTGACACCTCACAGGATCCCACCCACCCCAGTCAAGATCACATGGAGAATGCAGGTCCAGACTATGGAATCAAAGGCTCATTCTGCCCTAATTCAGGCAGGTTCTCTCCAAGGTCTCAGCCTCCTTAAAGATGTGAGTGGAGCTGAGATTGTTGTTGCGGTGAGGGCTCTGGAACCTTTGACTCTGGCAATTTGGGGCGTTCATGGCCTTTCACATCTTCCCCCCAACTTGTTCTCAGCGCCTTCGTGCTGTGTAAACCGAGACTCCTCAGCACCTTCAGGTTGACAGTTCCAGAAATGTCGCCTGCTTTGACTGTCAGCACAAAACTGGGGAACCAGTGTCGCTTGGACTGTCCAAGGTGCTCAAGACCACACCACAGGCCCCAGGCAGCAAGAACACCTACGCAAAACGACCCTACCACAAGGGACAGGCTTACAGTTTTCTGAAATGTTTACCCAGATCATGACTCCCAACTCTCCCCATCTCCTTTGACATCACTGGAGGTGGTGTGGACAGAGTCAAGGAAAATTTTTAAGGAAAAAGAAAAAAGAAACCAATACTTGTGATTCCCTTTCTTTGGAAGAGGATTATAAGGAAGGAAATGGCAGGTGGCGAGGGAGAGGGGAAGGAACAGAAGTGGGGTGTCTTTGATGCTGTGGTTTGTGCAAGGGTGGGGGCGGTGGGTGGACAAAGAGCACAGCAGTATGAGCATCTCTGCTGGTGACACAGAGTACCTCTGAAGTGTGGCCAGAGCTGCTCATATAAGTAAAACCAAAACATTTAAAAGAAAATGCTTGTTCCCTGGGCACTGATTGTCTATAGAATTTCTTTTGGCAAACCCTCCCAGGACAACCTGACCTAAAAAACAAAAAACAAAGAATCTCTGTCTCAGAACTGCTGGCCTAAAAAGCCAGAAGGGACATGACAGTGGAAAGTGCTAGAAAAGATAGAATGCTCTACTGTCTTTGCTGTACCTACCTATCCCACCGCAACTCTGGAAAAGAGGATTCAAAACTGATGTCACATATGAGAGTAATCTGGACCTCCAGAGAAGGAAAGAGTTTTTGTCCAGGACAGTAGAAGTTGATGCATGCGAGTGTAATGATTTGTTTCAATGCAAACATTTCTGATCAACAATCCTAGAGTTTCTTGAGAAGAAGGCACAGCGTTTGAGGAAAGGAGAATATGTGATGCTTACGTAGGACTCAATTTATAGCAAGATCCAGACATTTTAAAGTAGATCACATTATGACTCAACACTGTTACTTTGAGCAGATGGACCAGTCACGTGGGAGGATGGCGGCAGAAACTACTGTGAAAACATCTCCAGTTTTGAGATGAAAAGGGTCAGTTGTGAGATGAGCTCTGTTTAGCCATGATCCATTTTATGTTGAAGTAGATCAGAGGAGATATTTTAGATGGGCTGGATTTACACTGCAAAACTGTCAATGCAAAAACGGGCTTTACTTGGCAATGATGAAAGAAGGTGACAAGTGTGATTACCTTATTGCAGTTCTCTCTTCAAAAACTGTTTGGGGGCTTGCAATTAACAGAGGCTCCTTGTTTCCATTGTTTTTATGTGGGAGAAGAGAAAGGGCTTGGAATCTGATTTGTCTAAACAAGTGTGTGATTTGCAAGAAGTTCAGTCATTTCAACAGTATATCATGCTTAGTGTTCAATACAATGTTTATCATAAAATATGCACCTGAGTTTATATATTTCTGCCAGGCTGTAGGGCAATTACATCTTGCTATGCAAACACTATTTTATGTGTGAATTTTTTTAACTGTAATTTTATGTGTGAATTTTTTAAACTAAACTCTATCATCATTTTCCATGTTGACATCTGTTGTTTTTTGTGTTTTTTTGTTTTAATCTGTTTCCAACTCTCAGAGTCTGTGAACCATCCCTCTGACTGGATGCTGGCCTAAAATCCTATTAGTGTTTAAACAGACCTCAGAAACACCCGAACCTCTAGGCAAATGCAGAGATGGGGCTCTTTGATATAGCTTGGGCCCTTGATGTCTTCAACAAACAAGATCGTAATTCCTTTCAACTCCACGTTTTCTGTAGACGCTTTCTTCTCTGTTTTGTTAAGGAGTCGTCTTGTGGTTTTCCAGAGGAAGGAAACTCCTCTCCTAGACTTGAGTGCTGGGAGGAAGGTTAGTGATGATGGAGTCTGGCATTCCTTCTGCCTTTCCAGATGAGGTAGTGGGTCCAGAATATTTGGGAGGCATGCCTCAACCCCGCTGGTACTCAGCAGTGGTCCTGAGTGTAAACTTGGGACTTTGTGAGCCTTGACTTTGTGCCCCCTACCCCAGCACCTTTTGTTGTGGCTGGACACACGTGACACCAGAGCTGATTCCGCTCAAGACTTTCACATTGGTGGTCCAGGGCTAGGCGTCTGGCTGCTAACTTTTAAAAAAACATTTGAAGCCCCTGATTCTTCCTGGAGAAGTTAAGGAACCTCTTCACGTTTTTATAGAACTCTGACTCTGCTGTGGGTACGGCATACTAGTGAGTACAACCTGCTTGCCATAAAGTTAGCAGCCTATGTTGACAAATTCATTTTTCTCTAGGTACTCAGGTTTTAATTGTAAAGGTGGCCCCTGAGACAGATGACCACTGAGCACTTGGATTGCTTTCTAGAAACTGAGATTCTGATGGTAACCAAGCAGGTGTTTCCTCTCTCCTTAGACTAAGAGGTACATTTGCCCCATCCCTTCCATCTCCTGGTCCTCTGGTACCTGCTGTGAGACCCAATGAGTTTCTACCAATGGAAGGTCACTTTCTGCTAAACCTCACAAGCAAAGGGGGATTAGTCCATGAGGCGGCAAGGAGCAAGGGACCAGGATATTCATGACTTTGTTGCTAGACGTTTTTCAAAGTATCCTTGAACTCAGCAAACAAAGTTTTCTGAGAGATCTCTCAAAATTCAGGCCCTGCTCCATTTGGCCAAAAATGGATGGCTGCTTCAAAACTCTGAACGGCTTGAAACTCCATCTGCTGCAACATTACTTCCGGAGTTTGAACATGACTTTTTCTGTCTTTGAGTATAGAAATGTTTATTTAATTAATGATATACAAGGCTGTTAAACAGAAGGCGCCAAGCTGTGCTCTGCACTTGAGAACACTTGGCACCATCTTTATTCTGCCGATACTGCCAATCATCCTGGCTAGAGGAGGTGTATGTGAAAGTCCATATCCTAAGCTTAGAAGCTTTCAAGTACTTTTTTAATGAAAAATGCTATAGGGGATTGAACATTTTAACTAAAAGTATAAGGTTAGACCAATTACATGCAGAGATGTTTATTTAATATTGTGTGAACTGAGTTCTTCTGTATAAATTATTTGCACTCTCTTCTTGCATGACGAACTGATTTTTTTATAGTTGTTTGTACCAGACGGTGGCATATTTTTGTAAAATTTTTTGACACTGAATTGCAATAAATGTTTTTCCAACAACACACACTGGTGCATTTTTGGTGCATGTCAATTCAAGTTGGTTTTTTATCAAACTGAGTATGTTTACCTTTTGCTAAGTGAGGCTTATATTCCTTCTCTCAGAAACTTAACATTGTTGTAAAATTTTCTAGGAATACACAGAAAGCTAAGCTTGCTGC EMBV3_07259 CTTGTACCTGTCTATCTGCCAGAGTCAGAGGTGGACCGAGGAGAACTTGGAGTTAATTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24504 TCGCCGGCGCTGTCGCTGCGGAGTGAACAGCCATGGCCAAGGACATCCTGGCTGAAGCAG Variant GeneID:445364|IFT20:NM_001013603:49_cdna 102^331 1 EMBV3_01597 GeneID:445364 19 GENE IFT20 NULL intraflagellar transport 20 homolog (Chlamydomonas) EMBV3_37314 GTTTTTCTTCCAGTGTATCTTAATCCATGCCTGTCCGTGTTTACTGCGCTGCCTCCAGGC Gene GeneID:533223|WDR1:NM_001046346:9_cdna Constitutive 1 NULL GeneID:533223 6 GENE WDR1 MGC127353 WD repeat domain 1 EMBV3_11849 GAATTGGCCATAGTGAGGTCCTGAAGATCACCCTTCCAGGCACAGGTTCCTAACCCTGAA Gene BVT0102_085440 + 0 NULL GK000023.2:42567129-42626158 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133490 TCONS_00133485 TCONS_00133488 TCONS_00133487 TCONS_00133489 1 XLOC_081127 Coding TCONS_00133490 XLOC_081127 Coding Coding CCDC90A 23:42563359-42570442 j TSS99687 1764 1 TCONS_00133490_1 120 4 0.751482632024852 0.00167042388292918 0.000504314058362624 0.00141056304166335 0.00124893671887568 0.000153487758240898 1.52707558618263e-13 0.000422087153050585 0.000675538728050503 0.00110170447708315 0.00289247778396969 3.82118299285769e-06 0.000102558828924893 0.000232573051481378 0.00309842454025074 0.000299349279451001 0.000462012202353894 5.52981290880436e-18 2.95189942703747e-05 0.00185233413738149 0.00311076852357133 0.000833546731788244 1.73187633066129e-12 0.000749863853905661 6.31200154162561e-10 0.00253232174387997 0.00156399851447637 0.00194291455571121 3.91524336138544e-06 1.68089128015738e-10 5.56591532196972e-08 XR_239670.1 LOC101907865 PREDICTED: Bos taurus uncharacterized LOC101907865 (LOC101907865), 0.0 2832 99.75 0.895124716553288 XR_241912.1 MCUR1 PREDICTED: Homo sapiens mitochondrial calcium uniporter regulator 1 (MCUR1), transcript variant X1, misc_RNA. 3e-54 217 88.24 0.0958049886621315 TCONS_00133490_1 sp|Q96AQ8|MCUR1_HUMAN MCUR1_HUMAN Mitochondrial calcium uniporter regulator 1; 5e-19 82.4 90.48 0.341666666666667 1 coding 0 1 0 0 1.31940476724437 0.151840606765579 -0.0139263137418877 0.796227741596332 AGACAGGAAAAGAAACCCAACCGAGAGAGAGTATTCGTTAAACGAAAGGAAGCTGCTGGAAATAAAAACAGAAATGGTGTCACTGCACGCCCAGCAGGATCGGGCCGTCACACAGACAGACAGAAAGATAGACACCGAGGTTGCTGGCCTAAAAACCATGCTTGAGTCGCACAAGCTTGATAATATTAAATATTTAGCAGATAACACTCAGCTGGATGACTTTCTGTCCTCCGCCAGTATTCCATGTGACATTCCTCCTAGTGAGGGCGGGCCGCACCCCTGTCGCTTGGTCTGGGCCATCACTGACTGCAGTGGAGTCCTCCGAAGTACCAGCCCGCACCTCCCCAGCCTCGGGGAACAACGAACTCTCCTCTTGGTGGCCCGGACTGCCGGTTCAGGACCATGTTCTCTATTTAGTCAGATATATTCTATTTGAAAGCACATGAGCCAGAAATGCAAGTATACCCTTCCCAGCGCTCGCCTGGCCGTCTGTGAGCCTGTAAGTGGCTGGGGCTGGATTCCGTGTGACCGTTCCTGAGCTCAGCTGGCTTAGAGGAAATTCAGCATTAGCACTCAGAAGGGAAAAGATGCCTGACGAAACTCTGTGCGTCTAGCACATGGGGGAATTGGCCATAGTGAGGTCCTGAAGATCACCCTTCCAGGCACAGGTTCCTAACCCTGAATGTCAAGTGGCCTGAGCCCTTATTTCCTGTTCATGCACGAACCGCTCAGAAGGTTCCTCCATACCTTCTCTACACTCCCTGCTTTTTATCTTTTTAAAAGAGCTTAAGCTGCAGCCCGACTCCTCTCCTGTTCCCTTCATAAACAAGCCTGTTTGTGTGTATGGTTCTTTAGAGGAAACGTGAATTCTGACTTCCTTGCTGGTCTCAGCCCTCCACTAAGTACTTTTCCAGCTCGGTAGCTAACAAAACTACATCTGAAGGTCTCGTCTTTTCACTTAAGGATGTCAAGTACCAGTCGAGAAGTCTCTGGTTCAGGAAGAAAGGCTTGACTCAAGCCAGCCATCTTGCTCTGAGCTCTTTGAAAAGCAGACTCCTGAGCCGCAGGGTCTGTGGCCCTTTGCTGCTGTGCAGAGTGACGAGCTCTTCTGTCCCAGGCTCCTCCGCAGCCTCTCCTCCTGCTAACTAGCTGTGTCAGCGTTGGCAGGGACCTCTCTCCCCCCCGATATGCCGTGTTCTGAGAATTTTGGCGTCATTCCTGAACAAATGTCGTATAGACGGCACCATGGAACTCACGTCTCGAAAACTGGCTCTTAACATACGTTCATCACATGTGTTGTGACTTTTCTGACACTGAAGCAAAAACATGTTAATCAGGAGTGATTTATTCTTTATAGAAAATGTTTGAGCCTGTTTAGCCTTTTATCAGGGTTTCATTTGGAAAATACCAACCTTCCTGCAGATTTATAACTTATGTTGTTCTCATTATAACCCAGATCGTTCCTTAACCCTTTCATTACTTAAGCAAATGTTTGGTTACATTGTACTCTATGACAGAGGGGGCCTAATATTCTTATGATCTAAAATAAAATACTTAATTTTATGTGATTAGAATACTCTTCTGTTCACATTGAATATGAAAAACTAGAACAACTTCTGCCTACACTCTGTTTATACTGTTTTTTTCCTTCCAGTTGTATATGATAACAATGATGTATTATTTTAAAAATCTAAAACCTAAACATTTGGATTTGCATCCAGGATACATTTGAAAGTGGTTATTTGATTTAAAAAATAAATTTTT EMBV3_35125 GTCTCTGTAACTAATGAACGATTGGTTGACCTGGACCAAGAAGCCAGTTTTTTCGGAGCC Gene GeneID:507215|TNFSF10:XM_002684917:43_cdna Constitutive 1 NULL GeneID:507215 1 GENE TNFSF10 NULL tumor necrosis factor (ligand) superfamily, member 10 EMBV3_11114 GGTTTACAGGAAAATTGAGTGGAAAAGACAAAGAATCCTCATGTACCTCATCATAAACTG Gene BVV0101_013724 + 0 NULL GK000020.2:5686564-6205293 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17896 TGAGGAAATCTGCCCTATTAATAGCATAGAAGGGGATAGGAAATACCATACTTGTGAGCC Gene BVT0102_246704 + 0 NULL GK000009.2:77580819-77601988 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241853 1 XLOC_148517 NonCoding TCONS_00241853 XLOC_148517 NonCoding NonCoding - 9:77585758-77586400 - TSS181531 642 1 TCONS_00241853_1 60 0.314641744548287 1 0 0 0 0 0 3.8451483687969e-06 0 0 0 0 0 8.55771539702665e-05 0.000105822581150325 0 2.93084121086284e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.80551953934767e-05 0 XM_005197834.1 LRRC8B PREDICTED: Bos taurus leucine rich repeat containing 8 family, member B (LRRC8B), transcript variant X1, mRNA. 3e-49 199 82.69 0.319314641744548 0 noncoding 0 0 0 0 -0.140242429406035 0.278806604163465 0.00599213759615297 0.896697186411243 GAACAGAATATCCAGACATCGCTTGTATTCAAGTGCAGCTCAACCCGTGTAATTGTTTTCAAGCCCATCTTGACCTTTGTGCACCATAAGAACCTCAAAAATCGTGCTCCAAAAACCATTATTTCCATGAAAGAAAGTAAGGCTTGAGACGTGAAAGTTTTAGAACAACAATAATTGTTTTTTTTTTTTTTTCTCAAATGAATTTAAATAGTACAGTCGCTTGTTATAATTTTAATGTTTATAACTGTAAACTTCTCTATCAGTGAGCAAATTCATCATTTGAATATGTCCAGTTTGGGCTCATGGGTTTCCCCGGTGGCTCAGGGGTAAAGAATCTGCCTGCAACTCAAGAGACGTGGGTTTAATCCCTGAGTTGGGAAGATCCCCTGGAGGGGAGTCCATGGCAACACACTCCAGTATTCTTGCTGGAGGATCCCATGGACAGAGGAGCCTGGCAGGCTGCAGTCTATAGGGTCGAAAAGCATAGGACACTACTGAAGCCACTGAGCAGCAGCAGTTTTGGCTCACAAGTATGGTATTTCCTATCCCCTTCTATGCTATTAATAGGGCAGATTTCCTCAAAACATGCTGTTATTTTCATCATTTATTTGTGCATTTAATAAAAATTATATACAAGTTGAC TCONS_00236008 TCONS_00236009 TCONS_00236010 TCONS_00236011 TCONS_00236012 . 3' 4941 TCONS_00236008 TCONS_00236009 TCONS_00236010 TCONS_00236011 TCONS_00236012 . 3' 5582 EMBV3_25191 TGCACGGGGGCTGAACGTCCTCAGGTATAAAGCTGCTGTTTCCACGGTGATGTGTTTTCT Gene GeneID:616142|C16H1orf174:NM_001079790:207_cdna Constitutive 0 NULL GeneID:616142 16 GENE C16H1orf174 C1orf174 chromosome 1 open reading frame 174 ortholog EMBV3_08495 TCCAGTGACCACACTGCAGGTATTTCATCAGCCCTTTTGGTTCCCTAAATCCTGCTGCAC Gene BVV0101_048316 + 0 NULL GK000007.2:31173638-31460863 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21084 TGAGGGGAAATGGAGAAAATGATTTCTGAGGTCGCTTTCTGCTCCAAAACTCTGAGATGC Gene GeneID:784362|SCEL:NM_001102332:4_cdna Constitutive 1 NULL GeneID:784362 12 GENE SCEL MGC166381 sciellin EMBV3_38630 CCCAGCCTGGCACATTCGTAGGCCTCAGTAAATGTTTATTGGATGAATAAATGAATGGCT Gene GeneID:791022|MIR545:NR_031358:13_cdna Constitutive 0 NULL GeneID:791022 X GENE MIR545 MIRN545 bta-mir-545 microRNA mir-545 EMBV3_06284 AGGTTTTAGGCAAGATGACAAAAGTTAGTCCATAATGTATCTTGAGTACTTTGGAGAGTG Gene BVV0102_418910 + 0 NULL GK000009.2:61782666-61791085 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235669 TCONS_00235670 TCONS_00235668 1 XLOC_144277 Coding TCONS_00235669 XLOC_144277 Coding Coding UBE2J1 9:61758381-61785453 j TSS176583 4072 1 TCONS_00235669_2 200 0.0636051080550098 6 0.849802371541502 3.20006195410958e-43 4.22917833089723e-144 5.90840368257377e-12 3.14633899423453e-22 4.55121422181029e-05 1.52230187743942e-76 1.57485991221602e-05 2.67089285859308e-07 1.95393744128146e-24 1.18102058116035e-132 6.39114670492419e-10 6.13138870280852e-06 1.17557736568566e-20 3.50975945414153e-14 3.39718383151026e-17 6.31588633864914e-07 0.000427669417845282 0.00287988570619899 7.29664274877024e-84 8.07002113342946e-29 2.19084651718828e-49 0.000643031909904284 9.17901562111512e-07 3.31039864395023e-07 4.65052999190003e-17 3.24879463317282e-74 2.151916743987e-25 3.09327872703965e-29 6.30637794924873e-05 3.13677209171913e-54 NM_001206186.1 UBE2J1 Bos taurus ubiquitin-conjugating enzyme E2, J1, U (UBE2J1), mRNA. 0.0 2062 100.00 0.280451866404715 NM_016021.2 UBE2J1 Homo sapiens ubiquitin-conjugating enzyme E2, J1 (UBE2J1), mRNA. 0.0 3164 79.15 0.893909626719057 TCONS_00235669_2 sp|Q9Y385|UB2J1_HUMAN UB2J1_HUMAN Ubiquitin-conjugating enzyme E2 J1; 5e-123 355 93.00 0.995 0 coding 0 0 1 1 -1.2739339486636 0.00424784391811678 -0.0015950902850277 0.977705994158664 TCGGCCAGACCCGGTCGGCCCGAACCGAGTTGAGTCGCGGGAGGCGGCGGCGCGGAGAGGCGGTGACGGCGGCGGCGGGCCGGGAGGCTGGAGCCGGGCCAGCCACCCGCCATGGAGACCCGCTACAACCTGAAGAGTCCGGGCTAATGGACGATTTGAAGTAGGCAAGAAGATCTGTTTGAGCATCTCAGGACATCATCCTGAAACTTGGCAGCCTTCATGGAGCATAAGAACAGCTTTATTAGCCATCATTGGGTTTATGCCAACAAAAGGAGAGGGAGCCATAGGTTCTCTAGATTATACACCTGAGGAAAGAAGAGCCCTTGCCAAAAAATCACAAGATTTCTGTTGTGAGGGATGTGGCTTTGCCATGAAGGATATCCTGTTGCCTTTAAAATCTGGAAGCGATTCAAGCCAGGCTGACCAAGAAGCCAAGGAACTGGCTAGACAAATCAGTTTTAAGGCAGAAGTTAATTCATCTGGAAAGACTATTGCTGAGTCGGACTTAAACCACTCTTTTTCACTAAATGATTTACAGGATGATATACCTGCAACATTCCAGGGTGCTACAGCAAGTACATCGTATGGAACCCAGAACCCCTCAGCAGCATCCCTTCAACAGCCTGCCCAACCCGTAGCTAAGAGTACCTCCATGAGCCCTCGACAGCGCCGGGCCCAGCAGCAGAGTCAGAGAAGGTCGTCTACTTCACCGGATGTCACCCAGGGCCAGCAGCCAAGAGACAACCACACCGATCATGGCGGATCTGCTGTCTTGATTGTCATCTTGACTTTGGCATTGGCAGCTCTTATATTCCGACGAATATATCTGGCCAATGAGTACATATTTGACTTTGAGTTATAATATTGTTTTGTGTCTTAAGAGCTGTGACCCAGCTGCTTCATTAAACATTCTGCATTGGGTATAATCTAAGAATTGTTTACAAAATAATTATTTTATATTTACCCTTCATTCCTTTTTTGATCCTTATAAATTCAGTATAAATATTTCTAGACATTCAGTGTCCTGCTTAGTTTAAGGGACTGGAAGTCAAAGTCCCTTGTCTCTCTATCCAATCTGCTCTACAGGGAAATAACTTATTTGTTGTTTTTCATGCCTCAAGCTTTTCTTTATGTAAATTTGTGATACTTTCTGTATAGCCCTTCGAAATTTTTGGATAAAAGATGGGATTTTAAGTTCCAGTGAGTATTACTAGTTACTCAATACCATTTATTGAGTACTCTGTTTCTACTTATGTAGAATGATACAGGGATAAGAGTTGAAAAGGAAAAATAAAACCCCTCAAATAGCTTGCTTAAAACATATTCATGTGACAGATACTGGGATTGCCCATTCTATGACTGACTTTATGTCCTAAACATTCTTTGGTGAAAGTAGCTATTTTGGTCAAACATTTCTGAGGAAATGAGATTACATCTTTATTACTGGATGTTATTTGAAGAGGAAATAATGCTCTGTAACCACTTTGATATGCTGTTATCCCCTTCTCTCCAGTTCCCACACAAGATTTTTTTTAAAAAAGAAGGAAAACAATCCTCCATAGATCTTTGACTTAAGGAAGGAAGGGTCCAAGCCAGGAAGTTGCTTGATTTTCTTCCAAAAGTTAAATGGGAGGGTCTTAAGATTTGAATGTGTGCTCTACTTGGACTTGTATGTCTTTTGAGTTGTATTGTATGTCTAGCTTTATAATCACTATAAATTTAATTATTTTAGGAATATGCATAATATTGAACTATTTCATGTACCATTTTAATAGAAAAGCTCAGGGCCCATGTAACAGTGAGAGAAATTAGAAAAACCTCTACTTAGAATTGCCCATCTAATCAAAGCCCAAGAGATCATTTTCAGTGCAAAAATCAATATATAACTTAGTGCTAGCTAGCTCCACAAACTCGGGTAGATAATTGAAACTATCGTCGTAAATAATGCCTGGTGAGAACATAATCACAGGAAAACATTGCCTTCAGCATGTTCAGTAGCAGCATTGAGGGCACTCTCGAGAGTATTGCTAATGAAGATTTAATTTTTAAATACAGGCAGTCCCCAACTTTCAAATAGGTTATGCTCTAAAAATGCATTTGTAAGTTATTGTTGTTTTTTTTTACAACTCAGTGCTGTAAATTGTGTTTAGGTTTTAGGCAAGATGACAAAAGTTAGTCCATAATGTATCTTGAGTACTTTGGAGAGTGATATTTATAAAGTCCTTATGTGGTTTATTATGGGCAATATAGAAACAATTTATAAAATGATTTTAAAGGCCAATTTCATTTTTATTCCTGCTCTCATAAAGCTTTGGTTCTATGAACTGTTAGACAATTTGTTTTCATTTGATAGCCCAGTTTATGTTTGTATCTAAAATAAGAACATATTGTATACCATGATATAATGCACAGTTTTCTTAAATTTTAATAAATTAGCATTTTTAAGGTCTTTACAGATTGTTACTGTTCTGTCTACAGCTGAAGTTGGTAAAGTTTTTCTAAAAGCCTAAGGACTTTATGAAGACCTCCTATGTCAGAAAAATTATAGGTTAGTATCTTACAACTTTATTGCCCTGAGAAAATACGTTCTGAAGTCTTGATTTGGAGTGTAAGATATTAGGGATATTGGTTCAGTGGTCTCCTAGCAAGAGGACACTGACTCACCTGGGCAGCACCAGGTCACGTTATCACCTAAGAAGAACATCCCCATGTCTCAGCCTATGCTGAGATAAATCGTGTGCTAGGAACAATCTCCCCTGCTTTCCCTCTGAGCCAGCCTCAATCTGTGTGATATTGTTGCATGTTTCCATGGGGTGCATGTACACTTAAAACTGATTAAGAAGAAGGCACATCATACAGTTCCTCCTCTACCTGAGTTGGCCTCTCATCCCTCACTCATCAACTGCCAGGCCAGCTTCTCCCTTTTTTTTTTTTTTTTCCTTTTTTAGCACCTGATACACATATCTGAAAGTGGCATATCTTTTGCTTCTTCCCTTTCAGCTCACATTGCTACTTAAAAATTCTTAAGTTGTCGATCTGACCCCCATCGTGGAGTTAATGAACAAAATTGGTCTTTGGAGCCATTCTTAACACTCTGATAAAGGGCCTCTTCAGAAAACCATTATTTTTAAAGCCCCGCTGTAATTCCTTATTTATAGCATAAGGCCAGGAAAAAACGTGCGATCTGGTAGATAAATGCTTAGGACTCCTTTCCCAAATCCTAAGGTTTAGGTAACTCATGACTTTTTTTTTTGACCAACACAGCACATACAGGGATAGTTAAAATAGCTTGCATGCTTGAAAAAAACATGTCTGTTTTGCCTGTAACTGTTTAAACCAATGAAACCTTTTAAATTTTATGTATTGTGGACTTTTATGTAGCACTTTACATTTTCATGCTGCTTATAGTTTAATTCTACTGAAATAAATGAATTTCATCAAAATTCTCAACTACTTTTTAAAAAACAAAATCCTTTCAAATTGTGTATTATTTTGACTGAAAACACAAAGTTTCCTATTTCAGGAGAATAAGAAATCTTTTTGTTATTTTCTGGCTATGAATAAACTTCCTGGTACCTTGAGTCCTCCCATTTTTATAGAGCAGAATCAAGAAACAAGCAAACCTCACACAATTGGGCTTAGTTGTGCAGAAATATAGGCTGAAGTATTCAGTACTACTGAAGCACTATATTGTTTTATTACTTACACAGAAGTATATGAAAGGGGAACGTGTTTAGTGAACCTAACTTTAAACAAATAATGTGTACATAAATGTGTACTTTGGGAATCTTCTGGCGGTCCAGTGGTTAGGACTGTGTGCTTTCACTGCTGAGGGCCCCGGTTCAATCCTTGGTCGAGGAACTCATCCCAGAAGCTATGCGGCTCACTGAAAGAAAGAAGTGTATTCTTACAGCCTTTGTGGGAGGCTATAATTGCTCCAGAGCTGTTTGAAACGCCTCTTTAAATGCCTCAGAACTAGTTTGAGCTGCTGAATAAAACCAGTGACTATTTGTACCTGATTTTGAATTCTTTGTGTCATTTGGTGTTCTGTCCACTCTACCTCCTTAAATGT EMBV3_16545 CTATGACTACGGCTGGTCCCCATGAAATATCCACTCCAAGTTCCAAGTTCTTCGGTGCTC Gene BVT0102_160120 + 0 NULL GK000018.2:59229064-59268806 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091298 1 XLOC_056073 Coding TCONS_00091298 XLOC_056073 Coding Coding - 18:58831409-58832233 - TSS68644 824 1 TCONS_00091298_2 137 0.189320388349515 1 0 0 0 3.74351805375308e-06 0 0 4.84754642520539e-05 1.17955608329925e-06 0 4.78769645704696e-05 9.23767555780109e-05 0.000281749358394016 0.000105664910159992 0 0 0 0.000939147948046135 0.0002350646828937 0.00861054153474291 4.35129225028351e-06 1.24678159967352e-06 0 0.000235948788790579 0.000478742313035163 0.000855962565316775 8.4083442163794e-06 4.98769817659911e-06 3.31828626085392e-05 0.000357473958557102 0 9.85016418203477e-05 XR_230801.1 LOC101903668 PREDICTED: Bos taurus uncharacterized LOC101903668 (LOC101903668), 0.0 816 87.11 0.808252427184466 TCONS_00091298_2 sp|Q9NX77|ENK14_HUMAN ENK14_HUMAN HERV-K_16p3.3 provirus ancestral Env polyprotein; 4e-11 60.8 25.19 0.91970802919708 0 noncoding GCAAGAACACTGGAGTGGGTTGCCATTTCCCTCTCCACTCAAGTAGCATAGAAGGTTACTAATACTATGATGGAACGTTACCATGACAAAGGACTTCTTGGCTGGCTTGATGGTGAAATGGCACCCCTTCACCCTCGAATCCTGCTCAATAAACAGATTGGGCCTGAACAATGGGACATCTGGAAAGTTGCCGCAAGCACCGAAGAACTTGGAACTTGGACTGGATATTTCATGGGGACCAGCTGTAGTCATAGTAACTATTCCTTTCGTTATAATCATTCATATTTCATACAAACTTCTGTTCCCCTTCCTTTTGTTATAGCTATAGGGAACTTGCAGTTTAATAAGACTTTATATTCTGTGACTTGTATAGATTGCAAATTGTATACTTGTCTTAATTCCTATGTTTCTTTGAAAAACGAATCCCTTTTGATTCTTCAATCTCGACGTAATCTATGGTTGCCAGTAGATCTCCAATGACCCTGGGAAGAGGGTCCCATGGCAGGACTTGCCTCCTGGTTACTTACTAAATTACTTTGATGATCTAAACGATTCACTGGATGGTTAATTCTTGGAATTTGGGGATTAATAGCCATTTGCACTACTGCCGCTGTCTGAGGCATTGCTTTACAAACCTCAATTCAAACACACAACTTTATTCAAAATGGGACCAAAGATGCTCACACTATGTGGACCACTCAGGTGCCAGCAGCCGGCATGAGAAGCTCCACCCATGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGTGGGATCGAGCCTCAGGAGTCCCCCTGTATATTCTCCAGCATCTACCCC TCONS_00084491 . 5' 13619 TCONS_00084491 . 5' 13619 EMBV3_23744 GCCCGCAACAGCCTGCTTCCCCTCGGCCTCAAACAAAGTAATGAAAACCTAACACCAGTA Gene GeneID:506876|GPR146:XM_002698236:854_cdna Constitutive 0 NULL GeneID:506876 25 GENE GPR146 NULL G protein-coupled receptor 146 EMBV3_09733 GGGGAGAGCTAATGAAGACCAAGTATTCAGACATCACCACCATGTTTGAGGAGACCCAGG Gene GeneID:515270|GAMT:NM_001038544:59_cdna Constitutive 0 NULL GeneID:515270 7 GENE GAMT MGC133949 guanidinoacetate N-methyltransferase EMBV3_23192 GAGGCGAACCACATCTTCGAGTTGATGCAGGCTATGTGGCTTGCCAAACATCTGAGCACC Variant GeneID:615606|LOC615606:XM_002691652:380_cdna 103^237 3 EMBV3_07272 GeneID:615606 11 GENE LOC615606 NULL similar to Putative adenylate kinase-like protein C9orf98 homolog EMBV3_10413 CGTCGGCTCTTGGTGGGTCTGGCACAATTCCTGCCCCTCACCTGATCCTTAATAAAAGTT Gene BVT0102_227600 + 0 NULL GK000015.2:83245438-83248790 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060354 TCONS_00060355 1 XLOC_036694 Coding TCONS_00060354 XLOC_036694 Coding Coding ZFP91 15:83246178-83291141 j TSS45145 8136 1 TCONS_00060354_12 354 11 0.819291846448112 0.00116493249380415 1.42943988376166e-05 4.38430132405123e-10 4.75470676991569e-08 8.58489033372661e-248 9.11807170609553e-05 1.29633237344867e-07 3.77458935883363e-18 2.8340885044797e-07 0.000102006252025755 1.00327334100329e-07 6.03987988926998e-05 3.3681310446557e-19 0.000128794706608384 5.61916257098669e-05 0.00025059380029244 1.74317570052702e-22 6.66657658162855e-12 9.04767063633642e-20 1.83474405329882e-48 1.79680549181317e-29 3.61840474670956e-05 4.15156960498616e-05 1.23459365728763e-06 9.64478675850332e-51 4.83901083920441e-08 4.87371574411762e-47 8.78246169165879e-05 0.000125641315528732 0.000646947803295242 XM_005216585.1 ZFP91 PREDICTED: Bos taurus ZFP91 zinc finger protein (ZFP91), transcript 0.0 8350 100.00 0.568952802359882 NM_001197051.1 ZFP91 Homo sapiens ZFP91 zinc finger protein (ZFP91), transcript variant 0.0 3732 76.56 0.6210668633235 TCONS_00060354_12 sp|Q96JP5|ZFP91_HUMAN ZFP91_HUMAN E3 ubiquitin-protein ligase ZFP91; 0.0 554 93.35 0.974576271186441 0 coding GGACCAGGCTTACTGTTGGATTCTCCGGCCAAGTTTATTTCAGTGGTTTAAAATGCAATCATCTAGCAGTGTCATGAAGAATGAAACTGGCAGATTTGACACCAGGTTCTTAGGGGCAGATGTTTCAGTCATGCACACTTGCCGTCTAGTTATATGGCCTTAATTTCTCTCAAAAGTGACACTGGGGTCAGCTTTCCCTGTTTTTTGGCTACTGGCATTTTATTCACCTTGAATAAAATAAAGCAATTTCAAAAGGTCTGCTATAAGGTGGCCGTACATAAAGAAGTAAAACTATGGCCTTGTTAAATAGATATTAGCCCCATTCTTACCAGTAGTGAAATAGAAATTTGCTAAAGTTAACACAATTAGTAAGTAGCTTTGCTACTTACTATAATACATATAATAGATTTAATGTCAAAGCCTGTGTTCTTTCCTCTACAACCCAGTGGTCTTTTTTTACGGTTAACTGAAAGGAATAACTCATTCTCCCTTCCTTTGTGACTCTTAAAAACTTTATTTTTTAACGTAAAGGAGATTCCACCTCTGCATTACTTTTCGCAGCCATTGGATGTCAGCGTCATTCCAAAAGTCTGCTCACTGCAAACACAGCTTTGAAAAACTCCTACCCACACTATGCCAGTTTTTACTACTGAAATGCCTTCAGCCCCATCAAAGTGCAAAACACTCCACAGAGAAGATGAACATTTGCCCAATCTGAAGTGGTAACTGAGCCAAAGCACTGGAAGGAAAAAGGCTCTTCAGCACTTGGCTTGCAAAATATTGGACTCCATCTGCAGTTCAACTAAATGATTCATGTGAAATGTAGAATTGGATTCTGAGAGCTTGTTTCCAGCCACTCACTTTGGAGATTTTTAACCCTGGGTGCTTTCGTTTCCGGGACTGAGAAGCATTCCTGCAGATCGCTCCTTCATTATAATGGAGGAAAGGAAAAAAAAAGGGAAGCAATACAAGAAGTTCAGAGCCATCACCGAAGGCAACTCGGTAGATGAGCAAATGGAAACTCCCGTTTGATGCACTAGTCATTGAGTTGCACACGCTGGTAGAAAAAGAAATTCTTACAAAGCTGCAGTTCTGACCGTGCTTCCTGTGTAGCAGCGACATTTAAAAACCGCAGCAGCAGATGGTTTCGGGGTGGGGAGTGGAGGGAGGTGGTGGTGGGAAGCCTTCAGATGTCTGGGGAGGTCACAAGAGTCACGCTAACAATGCTTCACCACTCTTCCTTCCAACCCGGGGGCACAGGCAAGCCTAAGCAGCGGGTGCCAGTCCTCAGCCCTGATATCCAGGGGGAAAAAAGCAATTCCACAAGTCATTCCACAAACTTTTATTAAGGATCGGGTGAGGGGCAGGAATTGTGCCAGACCCACCAAGAGCCGACGGGACCAGTCAACTCCTGACCTCCAGACGCGCACAGAAGATGGGATAGTGCAGATGTATGTGAACGCTGGCCGGTCCCCGCGGCGGCGCCGTCTGACCAGAGGTGAGGGTTACTGCGTGGCCACCCTGACATGGTTCGCCAACACCGAGCGAAAAGTTACGGAAAACTCTGCCAGGCGACTCCAACCAGCGACTGGCTCGGTAGTCGTACCCGGATGCGGGCGGTCGCTCAGGCCCAACCCGGAAACGCCGCCTCCCGGAAGAGCGAATTCGAACTAACGGGACAGTCGACTACCTCTCCCAGCGCGCAACGGTCAAAGCCTCCCAGCATCCTCTCCGCCTCGGGGTTGCCATCTGTCTTCCGAAGGCTCAGGGGGAAGCGGAACTTCACTTCCCAGGATGCCTCGGAGCGAGCTGACCAGGCGCATGCGCCAGAAGGCGGGTCCTCCTTGCCCTCACGACCCCGCCTCTGTTCCACCGCCGCCATTTTTTCAGAGACTTTCATCCGGCGGCCGACGGGGCTTTTTTTCTTAAAGGAGAAGCAACAGCTCAAAAAAAAAAAAATACCCCCCCTTCTTCCCCGCAAGACCTCGCGGCGCTGGGGACAGAAAGGCCACAGACAGGAAAGTGGGGCCGGGGTGGAGGCGGAAGGACGCCGAGGCTCCCTCCGCGGTTTAAGGGAGAAGGATAGAAAGCCCTTGTGGCGTTAGAGGCTCCTTAGGGCGGCAGGTGCGCGCGCAGCCAGCCCAGGGTGCGCGCGAGGCGGGGAAGGAGGTGCGTTTCCCACCCGCCCCCTCGCGAGGCCTGCCCCTCCACTGTCCCGGGCGCGCGTTGAGCTCCGGAGGTTGGGGGGTGGGGGCGGAAAAGGTCACTTTGGGATTGTCGCGAGACGCAGCCGTTTAACGATGCATAGAAAAAGTATCAACTGAGAAAGATCCCAAGGAAGAGAAAGAGGAGGAAGAATCTGCCCTCGCTCAGGAAGCTCCCTCGGCAACAGCTCGGCCTAGCCGGGGCTGGCGTGGCAGCAGCCGCACATCCGTCTCTCGGCATCGCGACGCAGAGAACACCCGCAGCTCTCGGTCCAAGACTGGTTCCCTGCAGCTCATCTGCAAGTCAGAGCCAAACACAGATCAGCTCGATTATGATGCTGCAGAAGAGCATCAGTCTCCAGGTGGCATTAGTGATGAGGAAGAGGAGGAGGAAGAAGAGATGTTGATCAGTGAAGAAGAAATACCGTTCAAAGATGATCCAAGAGATGAGACTTACAAACCCCACTTAGAAAGGGAAACCCCAAAGCCACGGAGAAAATCAGGGAAGGTGAAAGAAGAGAAAGAGAAGAAGGAAATAAAAGTGGAAGTCGAGGTAGAGGTGAAAGAAGAAGAGAATGAAATCAGGGAAGACGAGGAGCCTCCTAGGAAGAGAGGAAGAAGGCGAAAAGATGACAAAAGCCCACGATTACCCAAAAGGAGAAAGAAGCCCCCCATCCAGTACGTCCGCTGTGAGATGGAAGGCTGCGGGACCGTCCTTGCTCACCCGCGCTACCTGCAGCACCACATTAAATACCAGCATTTGCTGAAGAAGAAATATGTATGTCCCCATCCCTCCTGTGGACGACTCTTTAGGCTCCAGAAGCAACTTCTCCGACATGCCAAACATCATACAGATCAAAGAGATTATATCTGTGAGTATTGTGCTCGAGCCTTCAAGAGTTCCCACAACCTGGCAGTGCACCGGATGATTCACACCGGCGAGAAGCCTCTCCAATGCGAGATCTGTGGATTTACTTGTCGGCAAAAGGCATCCCTTAACTGGCACATGAAGAAACATGATGCAGACTCCTTCTACCAATTTTCTTGCAATATCTGCGGCAAAAAGTTTGAGAAGAAGGACAGCGTGGTGGCGCACAAAGCGAAGAGCCACCCCGAGGTGCTGATCGCCGAGGCCCTGGCCGCCAACGCCGGCGCGCTCATCACCAGCACAGACATCCTGGGCACAAGCCCCGAGGCCCTCAGCCCGCCCGCTGGCGGCCAGGGCCTGCCGCTGCTTCCCGAGCCGCTGGGAAACCCCGCCCCCGGAGAGTGCCTGCTGCTGGAAGCTGAGGGTGTGTCCAAGTCCTTCTGTGGTGGGGCCGAGCGGGTGAGCCTGGTGACCGACGGCAAGCTCTTCGTGGGCGGCGGGGGCGGCACGGGCGCAGACGGGCTGGTCATGAACTCGGATATCCTCGGTGCTACCGCAGAGGTCCTGATCGAAGACTCGGACTCGGCGGGGCCATAGCCAGGGGCGGACCGGGCGCTGGGACGGCTCAGACTTTGTATTTAAAAGACAAAAAGGACAAAAAAAAAAATTTAAAGCATTTAAAATCTAGTGAAATAACTGAAGGGCCTGCTCTTTCCATTGGGTCACAGCGCACACACACACACACACATACACACACACACACCCCTTCTTCTCCCTCTGTCGTCCCCTTTATAAAATTGACGTTGCCTTTCTCAGAAAGCTCGACAAAGAAGCCGCTGCAGCAGCTCTTAAAGGAAGGGTTCTTTCTAAACTCTTTTCCAACCAGGCAGACTTCTGCTCATCAGCAGACGCCCCCTTTCACCCTGTAACTTCAGTGTGCTCTGGATCAGCTTTTAACTCTTAATAATATATTGATACCCTCTCTTCCCCTCCTCCTCCTCTCCCGCTGCCCCGTGGTCCTGGCTTCTACCCTTGCAGCACATGTATCTTCCAAGTATCATATACTTCTAATCTCCGGAGGCTGGCAGCTTGACTTGGCACTTTAGGGCCCCTGAGCAGGGTGAGCTGTTAAAACAGCGCACATCTCTCACCCCCTCTCCCTCGACTCTCTCCAGGTGAAGGAAGGAAGGCAGGCTGCGTGGGGACCACCTCCCTACTCTTGGCCTTCTCCGTCTTCCTTGCCCCCCGCCGCCCAGTCCCTCCATAAGGTTCTCAATGGTGCTCACTTGCTCGCAAGCAGGCTCCCGGCAAGGAGGGGCCGCCCGCCCCGTGGTCTCCGACCATAGACAGGGCTCTATCGGTGAGAAGTCCCAGACTGATGACAGAAATTTGCACTTTGAACATGTGTGTTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTCTGATTTTTTTTTTTTTTTTTTTTGTCTTTGTTGCTATATTTTGTGGGGCTGGGCAAGATTACATTATTCTGACGTGGGGTCCTTTGCATAAGAGGTACTTGTAGAAGGCAAGATAGAGGGTTGAGGAAGCACAGCCAGCCCCTGAAATCATAGCGCTCCAGTGGCCTTTGCAGAAAGCTGGTCCTCAGCACCAACAGAATCACTACAGTGCTTTTCTGGAAGCCTCTTCAGGGAAGGACAGTGGGGGTGTGGTAACTTGTGCTCTTTGAGCTTGCAGAGCATCGAGGTTCAGGAATTTTGAGGGGATGAAGGTTATTCAGGGTCTGAACTACAGAGCAAGGTTTTCTCCTGAGAGTTCTTCATTTGCTTCTCTGTGCCCGTCATTCCTCTGTACACACCCCCCGTCAGCCCAGCTCTGGCCCCTCTGTCTTTGCTGTGTTTCATCATGGGTTCGTCTCAGCTCCCAGTTGTTGAAGGGCACTGCTGTCAGAGAAGGAATCGTCCGAGTCAGACGGTTTTAAGTCACGGGAACTTGTTCTGTTGTGTTTCCCTTGTAATGACACTTCAGAAAAAGGATGTCTTCAGCACAGTGGATGGTCCACACAATGCTTTGGCCTTCACCTGAGATTCCAGGGATTACCATTGCCCTTGAGGTAGGGATTTTCATGGGTGTATCGCTTACTACAGTCCATGGGAGAGAGACAGTTTTGTACAACTTCATAACTTCCAGAAGACTAAAGACCTATTTTGGCTCATTTTTAGAGAACCAGAAGGGCAGTTTCTATCCTACATACCTCAGAAACTGGAATTAAAGGCTTGCCCTGTTCATTGTTTGTTAGAAATGTATAATGGCTGTTGGAAAGAATGAAGCTTTGCTGAGAACAGAATAAGGAACAGCTTGTTTTTCACAAACACTAAAACTACAAAGTTTGTCAGTTTTCTCTCTGATTTTTCCCCCTCCTAAAAAAAAGGGTAACGAAACGCCATCTCTGAAAGAGGCTTGCTCTACACCCACTGGGTGTGAGTGTTGGATGCCAGGGGGTAGGGAGGGACATGTCTGCAGTGAGAGTCTTAGACATGTGCTGTTTGTGTTCCCTGTGGAGGCTTTGCCATCGCCTCCAGGGCTGGGCAGAGAGTGGAGTGGATGGAAGGAATATGGAATGTGCTTTCCTGGCTGCAGTGAGGACTTGGAGTTGACTTTGGTGTGTGGAGTAGATGTAAAACTACTATAAGATTAATTGGACGGGTCTACAACGAAGTTCTTTCCCCGTAGAAGTCCTAGCAGGCGTCTGTAGCCGACACTTGTCACGGTCACATTTGTCTTATCCTTGGTCTCCGTGAATTACACTTGCAGCGGTTAGCCATCGAATGTTTTAGCCGCCTACACAAAAGCAAACTGCATTTTTAAAAGAAAACTTGGAGACAGAGGGAAAATGTTTTCTTCCCTTTATCACACTCCTCCCCACCAAAAGCAGCTCATCAGTTCTCATGATTTGAAACTCCCCTTCTCACTCTTCATAGCTACCGTTTGCCTGTAATTTGCTTCAATAAATTATTGTAGCAGATTGAGGTGAATTTTCAGGTATTTTTCACGGGTTTAGTTTGTTTTTTTTCCTTTTGAGAAAGGGATGCCAGCAAAGGAAAGAGTTGCTTTAAGTGACTGTCACCAGTTTCTCTTCCCTTTAACTTTCTGCTCCTCAGATGTTTACGTCACCATCTTTCTAAGGAACTCGGTCTTAAAATTCTCCGTTTCCTACTCTTAATCAAATTCTGGTACATTTTTAATACCTTCTCCCCGCAGCGTATTCTCCATCTTTTAATTGGCAGTTCTGAATTCTGGAAACGTACTTGAAACAGGCGTTGTTTCTCCAGGGTGTGCTTCCCCCTTGTTTGTGGTTGCCTGGGGTTATTTTGCATAATTGAGACTTAATATGTTGCAGAGAATTTAGATAAACACTGGCCAGGATGACTGGGAGTAAAAATAGCTACATTAAGGTATGGAAAAGCACCCACATAGAGCACTTGAACCTCCTTAGAACCTGTTTGGAGAAAAATATAGAGTGTACTAAACCTCACTAAGGTTATTACGGTCAGGCTGTTTGAAGCACCATCTTTCCCTCCTGCCTTTTTCCCACCTTCCAATGTACTCAAGAAAATTGAAAAATTGTAATGAATCAATTTAAAATATTTTATTTCCTAAAAGCCTTTTTTGCCTGTTGTAATGTGCAGGACCCTTCTCCTTTGATGGGAGAGAGACCTGAATCTAGGTCGAAAAGGTTATGTAAAAAGAAACTATAATAAAAGGGATACTCTGCTTTTCAAATCCTTGTTTTCTCTTAATCTAGCTAAGGCATATCCAAAATAAAATGTAAAGAAGAAAAATAAAAATTGTCTTCATGGAAGCAACTGGTCTTCCTTGGTTGTACTGAGTTACAGTTACGCTGGGGTGAAATAATTGATGCTGCTCAATGAGAAAACCAAGTGCCCTCAGAACAGGTTGATGAGGCAGACACTGTTGTTTGCCCTTCTTGCGAATCAGGTAGTTAGGTTTTGACTCTGTTTAGTTCTTGATTTCTAATACTGACATGCCATTCTGATCATTTGGCAAAATTGAAAATCCTTTCCGTGTTTCGACAATCTGGAAAAGGTGGCCATTTTAATGTAGTAAAGGAAGCTGTGGGGTTAATTTCACTCTGATGATGACAATACTCTGATAGCATTTAATATCAGTGCTCCTTCACAAAACTCAATGTCCATAAAAGTACAGAGTTAAAAAAAAAGACTCCTGCTGCCTTCCTTAAAGGCCTGTTGTGACAGTCCCCCGGCCCATTTCTTTCCCTCTGTGTCCCTCGATCGTTGTTTGTGGGACTTTTCCCCTGAGAAGGCATTTGTTTCGATTCACAGGTAGTGTCTGTGATAAAATAGAACTGCTTGATTCCTTTGGGGATGAGACATGTGACTCAACCCAGTTGGCATCACCCTGGAACTTACAGCTACATGGGATAAAGTGGTGCTGTGAGCACTTAAACTCTGCCTTCGCTTCTCAGTCCCGTTTATTCTGTTATGAAGTTTGTTAAGAATTTTCATTTTGTTAAGAAGCAATGTGGTATGACTGGGATAAGGAAGAAGAAGAAAAGCGTGTTGTCACTTGAGTGAGACTGCCTCAGAAATGTTACCAAGTCAGGGTTGGGTGTTTCCTGTCTTTTGGAAGAGAACAGGCCTAAACAGTGCCTGCCTCATCCTGGAAAGGGAGGCACCATGATTGAGATGATAGTGATGCTCCCTTAGCTGACTTGTAATCAAGTGAAAATTCAGTTTTAAACAGAGCAAAAGGGTGGGAGTGGGGAAAGTGCTGTATTTTTACAGGGTCTATTTCATGTAAACTTTGTGTCTCGAAAAATATGAACCACCCAAAGAATGAAATTGGAAAGTCAGTGGGAGAAACAGCTGTAGAATCAAAGACCTATATTTAAATTTTGAACCTAGGTACTGGATTTTGTGCACATGAATTAACTTCTTTAAGCCTGCATTTCATATGTAAAATAAGAAAACTTTATCTTGTAGAACTATTCTAAAGATCAAATAAAGGCTTTAAAGCAGGTAACCAT EMBV3_36806 AAGGTCCCAGCGCAAATTCTAACCTTCACCAAAGGGCCTCCCAGATTTCTCCAGTAAATC Gene BVT0102_060077 + 1 EMBV3_32919 GK000011.2:72312022-72315286 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025397 TCONS_00025403 TCONS_00025400 TCONS_00025401 TCONS_00025402 TCONS_00025398 TCONS_00025399 1 XLOC_014747 Coding TCONS_00025401 XLOC_014747 Coding Coding GTF3C2 11:72292290-72313668 j TSS18445 5334 1 TCONS_00025401_7 909 0.0864266966629171 19 0.751368293025214 0.0007026655253385 2.63526558181735e-09 8.75868445487207e-05 2.01041670744842e-13 0.000108754192546239 0.00019448723034279 0.00128477709444669 1.28304735209956e-17 8.67002729350334e-05 2.53543534630421e-05 8.69742260492487e-06 1.22293049353288e-20 6.8521821329657e-16 1.19893987935219e-09 1.03661289284362e-12 0.00023685875684655 2.18975757134284e-12 1.33535717604872e-14 0.000963269416135242 0.000307434915902485 1.55525470097556e-08 1.92714358355393e-23 7.51067546881232e-06 2.90881984861452e-11 0.000185785281857769 0.000636441815932698 0.000181106688071654 0.000143822843358537 2.42060195515026e-05 0.000104009098498271 XM_005193935.1 GTF3C2 PREDICTED: Bos taurus general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant X2, mRNA. 0.0 6516 100.00 0.677165354330709 NM_001035521.2 GTF3C2 Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant 2, mRNA. 0.0 4832 89.80 0.678102737157855 TCONS_00025401_7 sp|Q8WUA4|TF3C2_HUMAN TF3C2_HUMAN General transcription factor 3C polypeptide 2; 0.0 1552 89.35 0.998899889988999 1 coding 0 0 0 0 0.0729819957438252 0.637858940395403 -0.0259557949437195 0.612848217711328 CTTCGAACTTGGACTTCCGGAAGGACTTTGGTGAGGGGGCAGCCATTTTTTGGGGTGCTAATGGATACCTACGGGGTCGGCTATATGGCTCTGGAGGAGGCCGGCCCCGTGGGGAACATGACTGTGGTAGACTCTCCTGGACAAGAGGTGCTGAACCAGCTTGACGTCAAGGCCTCCTCAGAAACAACCAGTGTGGAGGCTTCCATAGAGATGCCATTATCTACCCCTTTCCCTGGATATGAGGATTCTCTGGATGAGAGGAGGCTCCTTCCAGAGCAGGAAAGCCTCTCCAGACTGCAACAGCAAGATCTTTCTTCAGAGATGTCAAAGGTCCCAAAGCCTAGGGCCTCAAAGCCTGGCCCGAAGAGAGGTGGTAGGACACGGAAAGGCCCCAAAAGGCCCCAGCAGCCTAATTCTCCATCAGCCCCTCGGGTTCCTGGTCTCTTAGATCAATCCAACCCTCTGTCCACCCCCATGCCTAAGAAACGAGGTCGAAAGTCCAAGGCAGATCTGCTACTGCTGAAGTTGTCCAAAGGCCTAGATCAGCCAGAGTCTCCACATCCAAAGATGCCCCCTGAGGACTTTGAGACCCCTCCTGGGGAACGACCCCGCCGAAGGGCTGCCCAAGTGGCACTTCTGTATCTTCAGGAACTGGCGGAGGAGCTCTCAACAGCGCTGCCTACTCCAGTGTCCTGTCCTGAGGGCCCCCAGGTGAGCAGCCCTACCCAGCCGAAGATAATCCAGCCGCAGGCAGCCTGTCTCCGTGGAGAAGGGGATAACACCGCACGGGATGAAGACTTTGTTCTCCAGGTTGAGGCTGAAGAAGCAGAAGAAAGCGAGGCCCCAAGTGAGAACTCTTCTGACCCCGAGCCTGCAGCGCCCCGAAGCACTACCCGAGGATCTACTCAGAAGCAGAAGCCACACGTTCGGGGAATGGCTCACAATGGCTTACCAAATCACATCATGGCCCCTGTTTGGAAGTGCCTTCATCTCACCAAGGATATCCGAGATCAGAAGCATTCATACTGGGAGTTTGCGGAATGGATTCCTTTAGCGTGGAAGTGGCGCTTGTTATCTGAACTTGAGGCAGCTCCCTACCTGCCCCAGGAGGAGAAGTCCCCGCTGTTTTCTGTACAACGTGAAGGACTTCCTGAAGATGGCACCCTCTACAGAATAAACAGATTTAGCTCTATCACTGCACACCCAGAGCGCTTGGATGTGTCTTTCTTCACTGGGGGCCCACTCTGGGCTCTGGACTGGTGCCCAGTGCCAGAGGGGTCAGCAGCCTCGCAGTATGTGGCTCTTTTCTCCAGCCCTGACATGAATGAGACACACTCACTGAGCCAGCTGTATTCGGGCCCTGGGCTGCTCCAGCTCTGGGACCTTGGGACCTTGCAGCAAGAAAGCTGTCTTGGCAACAGAGCCCACTTTGTCTACGGGATAGCTTGTGACCACGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTGGAGCATGGGAACTTCCAGGCACCCCTCGGAAGGCTCCTCTCCTGCCCCGACTGGGTCTCCTGGCTCTTGCCTGCTCAGATGGGAAGGTGCTGCTGTTCAGCCTGCCCCATCCCGAGGCCCTGCTGGCTCAGCAGCCCCTAGATGCAGTGAAGCCTGCCATCTATAAGGTTCACTGTGTGGCAACCCTCCAGGTAGGGTCTATGCAAGCTTCAGAACCCTCTGAGTGTGGTCAGTGCCTTAGCCTGGCTTGGATGCCCACCCGGCCCCACCACCACCTGGCTGCTGGATATTACAATGGCATGGTGGTTTTATGGAACCTTCCCACGAACTCACCCCTGCAGCGGATACGGCTCTCTGATGGCTCCTTGAAGCTCTACCCGTTCCAGTGTTTCCTAGCCCATGACCAGGCTGTGCGTACTCTTCAGTGGTGCAAAGCTAACAGTCATTTCCTGGCCTCTGCAGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCGACGACCTTATGAACCAATAAACTCTATCAAGCGCTTCTTGAGTACAGAGCTGGCCTGGCTGCTCCCCTACAATGGTGTCACTGTGGCTCAGGACAACTGCTATGCCTCTTATGGACTCTGTGGAATTCACTACATTGATGCTGGTTACCTTGGTTTCAAGGCCTATTTCACTGCTCCTCGAAAAGGCACTGTCTGGAGTCTTTCAGGATCTGACTGGCTCGGGACAATAGCTGCAGGAGATATATCTGGAGAGCTCATTGCAGCTATATTGCCTGATATGGCACTGAACCCAACAAATGTCAAGCGACCTTTAGATCGAAGATTCCCTATATATAAGGCAGATCTGATACCATATCAGGACAGTCCTGAAGGTCAAGACCACACTTCTGCTTCATCTGGGGCCCCAAACCCTCCCAAGGCTCGAACTTACGCTGAAACGGTCAACCATCACTACTTGCTGTTTCAAGACACAGATTTGCGTTCGTTCCACGGTCTGCCCCACAGAGAACCGATGCTGCGCATGCAGGAGGGAGAGGGGCAAACACGGCTCTGCCTGGACCGGCTGCAGCTGGAAGCTATTCATAAGGTACGTTTCAGTCCAAACCTGGACTCTTACGGATGGCTGGTCTCTGGAGGGCAGTCGGGGCTGGTTCGGATCCATTTTGTCCGTGGACTCACCTGTCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCATTTCAGTGCTATGTTCCAGCTGGCCTCCCCCTCTCCAGGGCCTGGCTTTCCTCCAACCAGCCATTGCCTTCTGCCCGGTCCCTAGTCATGGTCCCCACAGGACCCTTGGAATGAAGTCTGCCGAGAACAATTGGCTCCGAGCACACAGCCATAGGAACTGGGGCCTTCCTGGACAGTGATGCTGCCAGGCCTGGATCTTTAGACCTGCCTCCCCAGGACCCCTTAGATCCCTCTCCTTCCACAGACTTCTCCTGTCATCATGGCCCCCCGCGGGCAGGGGGGTTCTCCCTCCACAAACTCTCAAGTCTCAGCATAAAACTATGACTCACAAGAAACACTCAGCCTGTCCTAGGCTTGGGAGTCAAATTGCTCATATTGAGCATATTGTGAAGTGGGTAAAGCTAAGTAAAGGTACTGGGTGTTTTTGAGACCACATGTGAGTGGGTGTTTGGAGAACTGGAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATGTTCTGGATCCAATATTACTGCCTTCCTAACTTCCTCTTTAGAGTACCCAACACACAGGCCCACGAGCAGGTGATGGTAACTCATTGGACTGAAGCTGCTTATAGGACTTCCTTAACTAAGGAACACACCACAGACGCCCTGCCAACAGAAGAGTGGCTCAGATCTTACTTGCTCCTGCTTATGAAATATTCCCAATCACTGGTCATCTGACCCTTCTTGAGCACTCCTAGACAGTCATGTTTTTAAAATCTTCCTTTATATCAAGTCAAAGAGTACCTCTATACATTTTACCATGGGTGTTAGGAAATCTAGTCACTCTTCCCTGTGATTGCTCTTTTAAGTATTTAAAAATAGCTATCATGTGTTTCCCAAGTCTTTTCTTCTCTAGATTAAATATCATCAATTACTTTAACCATTCTTTTACACGTCATGATTTTTGATCCTTCTGTCACATTGTTGACTTATTAAACATATTTAGCTACTTTATTTCAATTCTCTGTATAGGAGGTATGTAAAATCCAAGCACAGTAATATATCTCATCTTGTGGGATGTTGCAGACTCACAGTGACTGCAATATTGCCTGTTAAGCAAGGATGGACCACCCTCCCACCCCACCCCACCCCCACCACCAAGGAGAACTAGGCAAACAATAGTCTTCAAATGTATGAGTATAACCTGAGGTTTGGTTGTGGGGAGCAGGGCAAGAGTCAGATGACTTCAGGAAGTAGAGAAAAGCACACAGCCAGCTCCTATTGAAGGGAGTGGAGATTAGTTCAGTGCCTTCTTGGAACAAAACCTGCTGGCACTCTAGACTGATTGGCCAAATATCTGGGAAGAACTTTCTGCCTCTTCAGTGGAGAATTTTATGTCAAGAAAATTTCCTTTAAGGGGAAAGGAATCAAGTAGTTCAATTCCTTTCCTGTGCAGAAGAGGAAACAGACCTGGAGGCAACCCAGACCATTAGCAGCAGAGGGACCACAACTCACGTCAGTGCCAAGTATTGCACCATCCTATTGTGCTAGCTCAGATTGTGCCAGTTTGTTTTTGTGACAGTTGGTAGGGAAGTGCTTTCCATTGCAGTGTTGCTTTGCTCATTCTACACAGCAGCCCCTTGGCACTGCATCATGAAATCCCACTTTCAGTGGTAGAAAGATGGGGCCTGGGGACCCATGTCATTGAGGCTGTAGGCTGGTATTGGCAGCCCTGCCCCTGCTGCCCGTTCTGCCCTCATCTCAGCCTCCAAAAGAAAATCAGGAAAATGCTGTCAGCCCTTGCTTGCTTTCTCTCCCATAAACCATTTACTCCCCAGGCCACTCCCCTCCAACCATTCCTCGTCCATGGGTTCCTGTGCGATTCTTCCTTTGTGCCTTTGCTCTTACTAGTCCCTCCTCCTGGAACGTCCTTTTCCACCATCTCCACCTAAGTACTGTTCATTGTTCAAGGTCCCAGCGCAAATTCTAACCTTCACCAAAGGGCTTCCCAGATTTCTCCAGTAAAATCTATCCTCTCCCATGTGTTCCCAAGAGGAAGGAAAGGAGGCTAAAGGAATATATATTGGGCACTTTCAAGAACTTTAACATATTACTTAATTTAACCCTAAAAAGTCAACATTGCCCCAATTTACTTGACAAAGATTCTGAGAGTTTAAGCATTCTGAAGAACGTCATAGAACTGCTGAGTGGTGGTAGTCTGACTTCAAACTACAACTTTCCAATTTGGCACATTTGGTCTCCTATTACATTTACTAGTGTAAATTTACTCTAGCATGGTGTTTTGTGTATAGAAACCTTTAGTTAAAAGTTTGTGATATCAAATTCTCTTGCTTCCTAACTGCATTTCTCCAGTATCTCTTATAGGATTCTCCCTGCCTTAATCATACAGGAATTGTGTAAATGGGGGGCTGGAACTAGTCAGGTAAAGAGCCTGAGTCAGACAAGGCTGCCTCCTGAAGTGTGAGCTCCCTGGGGATAATTAAGCAAAGGGTGCCAGGCTGACATCTGCCAGGGATCTTGCAAAAGTTTCCACTACCCTAGAAAGAATGTTGCAGTATATTCACAAACTGTTACAAATGTTAGAGCTGGAAATGGATTAGGAAATCACCTAATCTATTGGTTTCCAAACACTTGTAGTTG EMBV3_34344 AACTGGGCCTTGACAAAGTGTAAACCCCATGGATGGACTTCCCAAGGACTTATTGATAAT Variant GeneID:444878|COX5A:NM_001002891:34_cdna 521^562 3 EMBV3_07709 GeneID:444878 21 GENE COX5A MGC133649 COX5A protein EMBV3_02973 AGTCATGTGATCTTTCCGCAACCCAACTACGCGGACACACTCATCAGCCAGGAGAGCTGT Gene GeneID:539554|PCDHGA10:XM_002689237:108_cdna Constitutive 0 NULL GeneID:539554 7 GENE PCDHGA10 NULL protocadherin gamma subfamily A, 10 EMBV3_34331 CAATACAGGGAGGCGTGAGCCCTTGAAAGGTAGTGGGGCCTCATCCAGTGTATCTGAATT Gene BVT0102_125318 + 0 NULL GK000025.2:7730823-7734584 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146117 TCONS_00146121 TCONS_00146119 TCONS_00146120 TCONS_00146118 TCONS_00146116 1 XLOC_089027 Coding TCONS_00146116 XLOC_089027 Coding Coding CARHSP1 25:7732828-7741518 j TSS109339 2483 1 TCONS_00146116_1 147 0.0221506242448651 4 0.714696743008401 0.0046240792039932 0.00345622788167756 0.00127153036885773 0.00176359863597087 0.00305646853650413 0.000961517102982307 0.00271017740286553 0.0016888058833472 0.00427163042304537 0.000642230489932798 6.30098593305108e-07 0.000605434238200031 8.10587220973897e-06 1.01861167645468e-09 0.00069139400647434 0.000620383383264204 0.000664814313615925 0.00302668969544322 0.00350687590251455 0.0042265701604564 0.000871705263584811 5.38307164028409e-06 3.62628232807942e-05 0.000489989994201 0.000115559496887203 0.00245545332738178 0.000150396867670425 0.000322318013871435 0.000233390922617037 0.000724932948657329 XM_005224400.1 CARHSP1 PREDICTED: Bos taurus calcium regulated heat stable protein 1, 24kDa (CARHSP1), transcript variant X1, mRNA. 0.0 4417 100.00 0.985904148207813 NM_014316.3 CARHSP1 Homo sapiens calcium regulated heat stable protein 1, 24kDa (CARHSP1), transcript variant 1, mRNA. 0.0 686 80.47 0.303262182843335 TCONS_00146116_1 sp|Q9Y2V2|CHSP1_HUMAN CHSP1_HUMAN Calcium-regulated heat stable protein 1; 4e-93 270 93.88 0.993197278911565 1 coding 0 0 0 0 0.221941198499005 0.440235416109896 0.0705864378234267 0.219764594836188 GGGAGAGCAGTTGCTGGTTGGAAGTGTCAGCCATGTCATCTGAGCCTCCTCCTCCATCCCAGCCCCCCACCCACCAGTCCTCGACTGGGCTGCTGGACACCCAACAGGCCCGGGATCGCTCACCGTCCCCGCTTCGGGGCAACGTGGTGCCGAGCCCACTGCCTACTCGCCGCACCAGGACCTTCTCAGCGACGGTGCGGGCTTCCCAGGGCCCGGTCTACAAAGGAGTCTGCAAATGCTTCTGTCGGTCCAAGGGCCACGGCTTCATCACCCCGGCTGACGGCGGCCCCGACATCTTCCTGCATATCTCCGACGTGGAGGGGGAGTACGTCCCCATGGAAGGCGACGAGGTCACCTATAAGATGTGCTCCATCCCGCCCAAGAACGAGAAGCTGCAGGCCGTGGAGGTGGTCATCACCCACCTGGCGCCGGGCACCAAGCACGAGACCTGGTCCGGCCACGTCGTCAGTTCCTAGGAGCGGCCGGAGGCACCCTGGCTCCCCAGCTCTGGGGAGACACCCGGGGCAGGAGGCAGGACCAGACGAGAGAGGACAACTGTGCCACTTGAGATGGGGCATCTGAAAGGGGGGGGAGCGTGGTCCCTGTCAAGTGTCTCCTGGAGGAAGGGGTTGGAGACAGGGGAAGGCACGGGGGTGCCCTCGGCCACCAGCAAGCCTCCGACCACCGCAACCAACACCTCATCAAAACATTAAAAGCATTGAAAAAGGAGAGGCGCTCCCTGGTGGCTGAGTGGAGGGTCTGAGCCCCGCCCAGGGGCCGGGTCGGGCGTCTTCCCTGGCCCGCAGTCCCTCCCACAACCGCTCCCCCCGCCCCCGCCCCGGAATTGAAGGCTGAGAACCCCCAGATTGGTCCTCTGGGTAGTGACATGGACCCTGAGTGATTTCCCAGGAAGAATTTTCACCCGGAGCATGCGCACCACCCCGCCCTCCGCCCACATGCGTGAGCCTCTCCTTGGCCCTGGGCAGAGCAGACTTCTGGTTCTGAGCTGGTTGTTCCAAGGGGCTGGGGGCGGGGAGCACGCGGGGTCTTGGTGTCTCTGCAGCAGGAGGTGAAACAGCTGCGCGTCTGGCAGCCCTAAGTCCTCCATGTGGCAGCCGTGTGCTCAGAGGCGAGTCCTCGTTCTCTTTGAAGCCTGGTCCTGCCTGTCTGTCTGGTTGAGAGATCCTGGCTCAGCCACCCATCCGGGAGGTGGAGGGGAGGGGTGGGGAGTGTGGAGAGGGGGAGGGTCTTTGTTTCCAAAGGGACCTTTCTCGGGATCCATCTAGAAAAGAGCAGGTGGTTTGCTTCCTGGGAGCCTGGCCAAGTCACAAGTTGAAGGAGAAATAGGCCTTTGGTGGTGTTTTCAGGAAAATTGGTGTGAACTGCTTAGGATTTTTTTTTTTTCTTTAAGAACTCAAGCTCTCACCGGAGCCAGTTCTGTTTGCACTTTACTGTTGACATTGCAGACCTTTGTGGATATTTCCAGTAAACAGATCCTTAAGGCTTTCCTTTGGTGTGGCTTGGTTCGGCTTTAGTTGTGATTTAAAAATAGAAATAGCTGGGAAATATGGGAAAAACATATTTAACACATCTTGAAATATGTGGCCACACCCATGAAATATGTAGTCAAGGGTCCATTTGGCAATACAGGGAGGCGTGAGCCCTTGAAAGGTAGTGGGGCCTCATCCAGTGTATCTGAATTTCTGCGAGGGGGTCGGAGGCCAGAGCTATTTTGCTGAGGACCAATGGAGTTGTGTGTGTTTTTTAAAGTATGCCTGATTTACAACACAATGTTAGTTCCCCGTGCACAACACAGCGATTTGATATTTCCATACATCACGAAATGACCCCTGGAGTTGTTTTTAAGTAGGCGAGTAAGTGTTGGTTACAAGTGCGCAGTGAAACGTCACAGTTAAGGAAGCTGATCTTTTTTCCCGGCCTGCAGTGCCCCCTTGAGGGGTCTTCCCCACTCTGCCTTCTGCTGGTCCGCAGTGGCCATCTCCCCTCCAGCCTTGGACAGTCCCCAGGTGGCCCCCAGAGACCCCTGTCTGTTGGGTATGGACCACACTTTGAGTGAAGTCACTCATCCTTGAGAGACCCATCCTTGAGGTTGAGAGCCTGCGTCTTTGCCACCCGCTTCCTCAGGCGACTTCGCTGCCTTGCCCTCACCCCGGTACGTGGTTGGGGCTCCACGTGACCCCATCAGCCTGCTAGTGGGCTGGAAGTCGGATCTGCTCCTCCAGGTGACACGTGGGTCCTCTCGCTGGGAGACTCCTTTGTAAATACTCCATTCTCACTTTGTGTTGTGAGGGCTGGAAGGGACCCCTCCCCACTCAAAGCACAATCTTGAGTTATCCCAGAGGCTCTAGGAGGATGGATGGTGTTGGCGACCAAGCTGGGGACAGAATCCGGATTCCTGACTCCAGGTCTTTCCTCTCACCAGCACCTTTCTCAATAAACTGTTTTGCTGGAGAGTCTGGAGT EMBV3_05121 CCATCGACATCCAGACCAGCAAGCTACTCGACATTCACTACTTCCACTGCCTAAGAATTG Variant GeneID:509255|CDK5RAP3:NM_001075399:76_cdna 104^235 1 EMBV3_42083 GeneID:509255 19 GENE CDK5RAP3 MGC139862 CDK5 regulatory subunit associated protein 3 EMBV3_17967 CCTTTGCTCATTTCTTCTTTTCAGGTGGGTTCGCAGTGAAGGGACTGATGTCAGACTACA Gene GeneID:507881|COL5A3:XM_002688839:153_cdna Constitutive 0 NULL GeneID:507881 7 GENE COL5A3 NULL collagen, type V, alpha 3 EMBV3_43246 CACAGCTCGTCGGAGCCCTGTTTGTCATAGACTTTTGAGTTTACTGTTGGGACCACGTAA Gene GeneID:282215|DNAJB6:NM_174532:562_cdna Constitutive 0 NULL GeneID:282215 4 GENE DNAJB6 MGC139792 DnaJ (Hsp40) homolog, subfamily B, member 6 EMBV3_08529 ACCAGTGTTCTTTTTTGCCATGGAGTCAGGGTGCGGCTGGATCTCTCTTTGACTTACATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42669 TGAACACCCACAGAGGCAACTTAAGGGCAGGAATGGCCGTGAAGATGCTGGTCATAGCAC Variant GeneID:532677|KLK6:NM_001101140:301_cdna 72^216 1 EMBV3_30698 GeneID:532677 18 GENE KLK6 NULL kallikrein-related peptidase 6 EMBV3_27440 CTTAAGTCGCAACATTCAGATCCTCACTTGCAGCATGTGAGGTCTAGTTCCCTGACCAGG Gene BVV0102_011506 + 1 EMBV3_43264 GK000003.2:121111325-121118651 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180670 1 XLOC_110437 NonCoding TCONS_00180670 XLOC_110437 NonCoding NonCoding - 3:121113849-121114326 - TSS135429 477 0.335429769392034 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00011074055242594 0 5.26012642989683e-05 0 0 0 0 0 0.000351458870363402 0 0 0 0 0 0 XR_138724.2 LOC100847870 PREDICTED: Bos taurus uncharacterized LOC100847870 (LOC100847870), 6e-19 98.7 75.69 0.29979035639413 0 noncoding GCGTCTGCTGATAGAGCGTGGCAGGCTGGCCTTGGGGGCTCTGCGCCCACGTGTGAGACGAACCTGGATTTACAGGGTTTCTGTTCCTACTTCTCTATCTGGCTGCGCTGGGCCCTCGCGGTGGCTGCGCTTTGATCCTCCTTGTGGCGTGTGGGATCTTAAGTCGCAACATTCAGATTCTCACTTGCAGCATGTGAGGTCTAGTTCCCTGACCAGGGACGGAACCCAGGCCCTCCGCGCCGGGAGCGCAGAGTCCCAGCCCCTTGGCCACCCGGGAAGTCCCTGTTTCACACGATTGACAACAGGGTCACGTCCGTGTTTTGCATAAGCAAAGCTAACTTCAGAGAAACAGTTTTAGAAGTAAATGAGTTTGTATGCTGATTGGGAGACATAAGCAGCCAGAGAAATTAGTTATTCCAACTATAATATTTTTTAACATTATATACTCAGTGTGAAAGCTGTAAAAACAATAGCAAA TCONS_00171652 . 3' 2524 TCONS_00171652 . 3' 3000 EMBV3_19213 CCAAGAACTCTTTGCTGCCGTGATCCTGTCTAATCCTCCCTGTCTTTGGAGAAAGTGCCG Gene GeneID:787488|AFF3:XM_002691147:172_cdna Constitutive 1 NULL GeneID:787488 11 GENE AFF3 NULL AF4/FMR2 family, member 3 EMBV3_35949 TCACAACCTCAGATTTGTCCGTCTGCCAGTAGCTAAGCGAGAGATTTGTGAGCGCTGGCT Gene GeneID:511581|C1R:NM_001034407:34_cdna Constitutive 0 NULL GeneID:511581 5 GENE C1R MGC127774 complement component 1, r subcomponent EMBV3_21690 CTGGTTCAAGAACGACCAGAGCCTGGCCAACCACCCCGCCGCGTACACCACCGATGTGAT Gene GeneID:100337233|LOC100337233:XR_083887:204_cdna Constitutive 0 NULL GeneID:100337233 16 PSEUDO LOC100337233 NULL Immunoglobulin-like and fibronectin type III domain-containing protein 1-like EMBV3_20473 GTGCAATGGCCTTTGATAGGAATGCGGTAATAGTGGCCTTGTCTTCAAAAACATCGGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19930 GCAGGTGAGCCTGCCTTTCAGGCATGTGTCCACTAGCCACTCTTCCACTACTTAACTCTT Gene GeneID:505819|MASP2:XM_002694057:161_cdna UTR3_Alt 2 NULL GeneID:505819 16 GENE MASP2 NULL mannan-binding lectin serine peptidase 2 EMBV3_40114 GGACCTCACCTTGGCCGACGAAGCCAGCAGGACCGCCACGCAGACCTGCGAATCCACGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05019 CGAGTCCCGCAAGGCAGACGGTGTGCACACGAGTCCATCGAGACCATGAGGATCCGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31165 TGCTGCACTCCATGACGTTGAAAGAGTCAGACACGATTTGCCAACTGAACATCATCTCCC Gene BVT0102_304609 + 0 NULL GK000021.2:69874001-69896139 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05346 GACAACCGGCTCAACAAGGTCATCAGTGAGCTCAACGGAAAGAACATCGAGGACGTCATT Gene GeneID:521901|LOC521901:XM_002688991:67_cdna Constitutive 0 NULL GeneID:521901 7 GENE LOC521901 NULL similar to 60S acidic ribosomal protein P2 (Renal carcinoma antigen NY-REN-44) EMBV3_02668 GTTCTGGTTTTTCCTCATAACATTTTATGGAAACACCCAAATGAACTTTTTGGCCAACCC Gene GeneID:516241|LOC516241:XM_002687241:63_cdna Constitutive 3 NULL GeneID:516241 5 GENE LOC516241 NULL similar to cysteine sulfinate decarboxylase EMBV3_03114 CCAACTGTGACCTGATCCTGCAGGCCCGGCTCTGCGGCAACGAGTACTACTCCAGCTTTT Gene GeneID:614084|PAPLN:XM_002691055:469_cdna Constitutive 0 NULL GeneID:614084 10 GENE PAPLN NULL papilin, proteoglycan-like sulfated glycoprotein EMBV3_17277 GACCGTCAGGCCTCCAGGATCAATGGGGATGAGTTTGAACTTAGAAGGAGAGTGGCATTA Gene GeneID:617311|MEIS3:XM_002695108:580_cdna Constitutive 0 NULL GeneID:617311 18 GENE MEIS3 MEIS3P1 similar to Meis1, myeloid ecotropic viral integration site 1 homolog 3 EMBV3_27818 GGAGAAGGCCAAACCCCAGAATCCCAACAGCAAGGAAGCCCATGACCTCCCTGCGAACAA Gene GeneID:786290|MN1:XM_002694619:170_cdna Constitutive 0 NULL GeneID:786290 17 GENE MN1 NULL meningioma (disrupted in balanced translocation) 1 EMBV3_13459 CACTGAATACAACCCAACCCAAGGAGTGAGGTTCGAGTCTTGCTGGCCAGCCCTGATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06514 GGTGGTGCAAGCAGATGGTGATCTGGCCACACTATACAGCTCCATTCCTTGACAAACTGA Gene BVV0102_064198 - 1 EMBV3_38900 GK000017.2:13736748-14230808 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074907 TCONS_00074908 TCONS_00074912 TCONS_00074910 TCONS_00074906 TCONS_00074909 TCONS_00074911 TCONS_00074914 1 XLOC_046450 NonCoding TCONS_00074909 XLOC_046450 NonCoding NonCoding - 17:13737208-13739689 - TSS56634 1019 2 TCONS_00074909_1 49 0.160942100098135 3 0.590322580645161 0.000172202235864788 1.65136356817198e-49 5.58256304005518e-05 1.94092340553429e-62 0.000956755369591717 2.05960691703738e-05 6.74077200580543e-92 7.90292707111899e-183 5.91959423940919e-260 5.86970778626436e-23 2.10822757282606e-06 0 4.53316918123874e-50 6.86562103347557e-149 3.78722231846341e-26 0.000401508617568792 0 2.46230631004188e-05 8.94957715690932e-34 0.000254700660346345 0 8.01052763340418e-05 0 0.000403430968458444 6.50893145656663e-05 9.1910370891643e-07 1.15410369234173e-18 0.000216800075295425 0 1.76214911071928e-08 XR_232864.1 LOC101907673 PREDICTED: Bos taurus uncharacterized LOC101907673 (LOC101907673), 0.0 1113 100.00 0.604514229636899 XR_244640.1 HHIP-AS1 PREDICTED: Homo sapiens HHIP antisense RNA 1 (HHIP-AS1), transcript 2e-41 174 66.88 0.575073601570167 0 noncoding 0 0 1 1 -0.065283304567702 0.541707542656315 -0.0118567806954286 0.805533940771416 CCCTTCCAGGGCCTCCCCTACCCCGGCTCCGACCCGCCCCTTGCCCCGGAGGGAGGGTGAGCCGAGTGGGCTGGAGTTGTGGTGGGGGAGCGTTTCGGCCCCTTTCCCCACCACCCTGGCCCGCGCGACTCCTCCATCCCCTGGCGATTTCCAGTGTGAAGCTCACGCCGGTACAAATCTTCCTGGGGTCACATTGAGAGGCGGGGATATAGCCCAGATGCTGCAAGTCGCTGAGAATGTGCAGATGAAGACTGTGCCGAGATTTACCTCTCCGTGCCTAAGTCCTGCGCGCGCCTTAAGTGGCACAAGCGCCTGGCCTGGATTTGCTAGTGGAACTAAGTTTTTCCCGAAAGAGGTGACAGAATAACTGAGAACAATCTGCTGGGCTGTGGAATCCAGTCCTGAGCTCACTAGGGAAATAGCAAACTCATCTATAACCAGATCTTCAGCATATTTTTTTTTTAAGAATCAAGAATCAACATTGAGCTATTTTCTGAAAGTAAACCATTAAAGCCCTCCTGGAGTCTGCCCAACGGTCTGCGAACTTGAACCTGAGAAATGGACTTGTTTTTCATCAGGGTGATCTCCTTCTTCAGCTGAATCATCAGAAGTGGTGAGACGAAAAGACTCCTACCCAACCAAACTGCTTCAGACAAATTCAATCAGTTTGTCAAGGAATGGAGCTGTATAGTGTGGCCAGATCACCATCTGCTTGCACCACCACTGAGCTGTCTCTCTACGACTGCCACCTACATGTAGGTTGTACCCAGTGCAGGGCATCCCGCTGAGGCAGGGCTTGGGAGCTGAAATCCTGCTCCATTCACCAAGCCAAGTTTATTGGTGCCTGGCCAAATGATGTGGCTTCTTTTTCTAATTTGCACCAGTGCACCCTGTACGGTCTAGTGACATGTCTGACCATCCCAATCCCATACCCCAGTCCTATCTGAGATTCTATTCCTTACCTCAGATGGATTCAAGGTTTTCATGAACAAATTAGGTGTCTTGCAAAAGATGAAATG TCONS_00076709 r 5' 0 TCONS_00076709 r 5' 0 EMBV3_24546 GGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGGATTTTCCATCAGCAT Gene BVT0102_017851 - 0 NULL GK000002.2:48702762-49735994 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179596 TCONS_00102424 TCONS_00013240 TCONS_00132043 TCONS_00243948 TCONS_00098275 TCONS_00098385 TCONS_00031871 TCONS_00201267 TCONS_00154811 TCONS_00099834 TCONS_00169479 TCONS_00185628 TCONS_00105301 TCONS_00199297 TCONS_00174545 TCONS_00025106 TCONS_00025108 TCONS_00230483 TCONS_00252175 TCONS_00172905 TCONS_00174542 TCONS_00202431 TCONS_00174541 TCONS_00187484 TCONS_00056222 TCONS_00132257 TCONS_00175295 TCONS_00013239 TCONS_00169645 TCONS_00174540 TCONS_00174543 TCONS_00039773 TCONS_00221594 TCONS_00161883 TCONS_00102423 TCONS_00174544 TCONS_00110376 TCONS_00238548 TCONS_00140494 TCONS_00169477 TCONS_00171161 TCONS_00013237 TCONS_00088693 TCONS_00119058 TCONS_00187773 TCONS_00178137 TCONS_00226267 TCONS_00029929 TCONS_00243949 TCONS_00000314 TCONS_00222044 TCONS_00169478 TCONS_00226268 TCONS_00154809 TCONS_00164253 TCONS_00107398 TCONS_00117782 TCONS_00171162 TCONS_00154810 TCONS_00132044 TCONS_00013238 TCONS_00174546 TCONS_00202430 TCONS_00031828 TCONS_00154812 45 XLOC_109368 XLOC_061863 XLOC_008038 XLOC_080693 XLOC_150314 XLOC_058521 XLOC_058631 XLOC_018116 XLOC_122915 XLOC_094549 XLOC_060077 XLOC_103372 XLOC_111681 XLOC_062534 XLOC_120950 XLOC_104638 XLOC_014669 XLOC_139973 XLOC_155116 XLOC_104243 XLOC_123974 XLOC_113529 XLOC_034025 XLOC_080738 XLOC_105077 XLOC_103408 XLOC_023590 XLOC_134908 XLOC_098768 XLOC_066280 XLOC_145215 XLOC_085141 XLOC_103753 XLOC_053479 XLOC_072804 XLOC_113817 XLOC_107910 XLOC_137960 XLOC_016184 XLOC_000088 XLOC_135353 XLOC_100173 XLOC_063308 XLOC_071948 XLOC_018073 Coding TCONS_00119058 XLOC_072804 NonCoding NonCoding LOC100848861 21:29773433-29776318 = TSS89250 1054 3 TCONS_00119058_3 54 0.926944971537002 2 0.635228848821082 0.000503437518091544 0.000271708745837114 0.000276565618812286 4.33328803190004e-05 4.68423594046937e-05 0.000103510277923514 0.000122646825030631 8.32400278053164e-05 8.23447789634672e-05 0.00312504040097038 0.00162176020407817 0.00161052902615223 0.000236384771219254 0.00141849031290288 0.000294730978969639 0.0147719322494482 0.00319104090303542 0.00470752190350511 0.000654841515267252 0.000278605901718801 0.000123848402799171 0.00470538169822193 0.00430123960902965 0.00368350929784747 0.000122705383592742 0.000140374704507878 0.0020823003153368 0.00328054981297988 0.00374611996567832 0.00538002575172158 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 1474 99.76 0.778937381404175 NM_152473.2 ERVV-1 Homo sapiens endogenous retrovirus group V, member 1 (ERVV-1), 6e-10 69.8 73.64 0.114800759013283 0 noncoding 1 0 1 1 -0.413014337539021 0.0132539193620166 0.541912349801995 0.00143639346602512 AGAAGCCTCAGATATCAAGTAGTGCTGATGGAAAGTCCAGGCCTCACTATATCCCCTTGTGAGGTTCTTAACCCAGCTACCCTCCTGCCTACCCCCAAGGGCTCTGTCCCCTTTCACTCTTGCCTAGAAACCTGCACCACTGGACAAAACCCTGAGAGGGATTGTCTGAAGATCCTCTGACCAACCCTGAGGAAATCCGATACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCAGGATATGCAGGTCAACAAGCTACAACGTGCAGCGCCAGTTCAACAAAGATACAAAGCACTACAGCCGACCACGGAAAATATCACTCACCCTTAGATGGACACCACTATAAGGACTCTGAGGCCTGAGACTAGCAAGAGGGGGAGGCCCAATACCCCTCGCCGTCCCAGTTCAGCAGGAAGTAGCCAGAAAGACCTCGACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGTAATGTTAGGTAGTTAGAATAGGAAACATGTCCAGAATGGCGGTGGCTAAAAGACAAGGAAGGGAAAAGCCCTCGAAAACGGAACAAAGGAAGGTCCAAGGACTTGAGTGAGGACCTCGGGTAGAACAAACAGGACTCCTGGCCAGCCCAATTTACACAGGGCAGGCCCAGGGGGAGGAAAAAACATTAAAAAAGAGGAGCCAAAGGGCCAGGAGTCTCTCTCCCCCCCACGCGTTCATTCTCTCTCTCTCCTCTGCGATTTTGGGTCGACATGGCCTCATGCCTTGAGGATGTATTTTCCTGTTATTTTCTAAATAAAACTGATCTGTAACACAGAGCTGTAACACTGATCTGTCCAAGAGCTATAACACGGTCTGTTTGAGACCTGAGAGCTGTAACATGGTCTGTCTGAGAGCTGTGACATGCCGAGGGCTTTAATGTCTGTCACTTCAAATTTTTGTTGAGACAGAACCGAGACTTCACTCCCCTGACAATTCCACATATAAGAGTTGCCTAATCAGAGCTCAGAGGAAGGAGCTGTTATGTCCTCTTACAAGAATGAGCATT EMBV3_25124 GCCAGAAGGTTGGCACAGTCATTCAGCTAGTTTATTGAGCAACTGCTATGTGCCAAGCAC Gene BVT0102_406797 + 1 EMBV3_15690 GK000003.2:94844046-94861222 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23906 TGAACTGTTGGCACAGACACCAAGACTCCCGGTGATGAGTTGAGAATAAGTCTGAGCCCA Gene GeneID:541230|VPS45:NM_001083501:148_cdna Constitutive 2 NULL GeneID:541230 3 GENE VPS45 MGC139503 vacuolar protein sorting 45 homolog (S. cerevisiae) EMBV3_09767 AACCAAGTGTATCTGCCAGAAAACCACGCCCGGCTCAAGGCTGCCCACACCTATGTCTCT Gene GeneID:505649|ACCS:NM_001015526:39_cdna Constitutive 1 NULL GeneID:505649 15 GENE ACCS ACS 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) EMBV3_11307 CCCTGCAGGCCTGCGGAGTGCGCTTCACTAGGCTGGCTGTGCCCCCCTCCCCATTTCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31487 AGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTATTCCCTCAAGCACCTAACTTC Gene GeneID:505123|CHD1:XM_002689414:62_cdna UTR3_Alt 2 NULL GeneID:505123 7 GENE CHD1 NULL chromodomain helicase DNA binding protein 1 EMBV3_33519 CAGAACCTGATCCGAGTCATCGAGCCCTTTTCCCGAGTACAGATCGAACACATATCTAGC Gene GeneID:513461|PSMD11:NM_001046148:250_cdna Constitutive 1 NULL GeneID:513461 19 GENE PSMD11 MGC137609 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 EMBV3_23571 GCAAGGAAGAAATTGTTCAGTTCTTCTCAGGTATATCGAAATCTTTAAGAGCAGTCGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30733 GAGCCTCATTCCCGTTTATCAGTTTCTCATTCAGGGTCACATGGAAGGCATTTGGCAACT Gene GeneID:522864|LOC522864:XM_002690921:222_cdna Constitutive 0 NULL GeneID:522864 10 GENE LOC522864 NULL similar to KIAA1370 EMBV3_15070 TCCACTGCTCTGGCACGTCTACGAATGGTGGACACCGTGGAGAAGGAAGATGTGAATGAA Gene GeneID:539924|MCM7:NM_001025345:272_cdna Constitutive 0 NULL GeneID:539924 25 GENE MCM7 NULL minichromosome maintenance complex component 7 EMBV3_15507 TTTAAGACCGTATCCGTGCTAACACCGACTATGCAGGGGCCTCCATGGCTGTGATAAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10956 CAGGAAGGAGACGCATTAAACTTATCAGGGACCAAAACCCCTAAAGCTGCAGTACCTGGC Gene BVT0102_085225 + 0 NULL GK000001.2:72477442-72572937 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10013 GAAGACTTTGCCAAATGTCCGGAGGCCACAGAGCTCACAGAAGAGAAGGAGGCTGAGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00024 TGCAGCAGGGAGGCCTTTGTTATGTCCCAAGATGCGGCTCGGATGATGTATGTAGTTTTC Gene GeneID:784344|LOC784344:XM_002689960:14_cdna Constitutive 0 NULL GeneID:784344 8 GENE LOC784344 NULL similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 EMBV3_18916 TAGGAGAGCAGGTAAACAAGAAAGACATCTGTGAGAGTTCACCCACTAGCCAGTAATGTC Gene BVT0101_034417 + 0 NULL GK000018.2:65160003-65164979 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091940 1 XLOC_056709 NonCoding TCONS_00091940 XLOC_056709 NonCoding NonCoding - 18:65161586-65163098 - TSS69286 1512 1 TCONS_00091940_3 61 0.772486772486773 1 0 0.00141276123118049 0.000485143612285438 0.00142604622113571 0.000455849966517156 0.00215184934928285 0.000745216975750284 0.00202875580289579 0.00094862388748282 0.00108019753480119 5.98670063391108e-05 3.48222505968408e-05 0.00016317605618718 0.000170790598540136 4.04444216965958e-05 0.000509440000453583 0.000768593982494245 0.000208626486189245 0.000531026648991752 0.00124258219273499 0.00228298858111857 0.00140593010471108 0.000279747350560083 0.000188092317586946 0.00194589428545956 0.00193603260022226 0.000997841668811875 0.00115090497569916 0.000215989689161885 6.74248598142405e-05 5.56690097554256e-05 XM_005195516.1 LOC790009 PREDICTED: Bos taurus zinc finger protein 211-like (LOC790009), 0.0 930 99.62 0.34457671957672 XR_246212.1 PGBD2 PREDICTED: Homo sapiens piggyBac transposable element derived 2 (PGBD2), transcript variant X2, misc_RNA. 3e-10 71.6 79.27 0.0535714285714286 0 noncoding GGATGAATTAAAAATGGTACGAGGACACTGCTTCAAGGGGTGTACATAAGTATCAAAACGCACATTTTAAATAAGTAAAATTTATTTTAAGTCAACTATACATCCATGAAATGTTTAAAACAAATATCCAAAACCTATCATTTTATAAGCATTCAAGTAATGTAAAATTCTTAAAATTATATGTAGAAATACTGAACTTGTAAAGGGGGAGTTACACAATGGTGGGCTACTGGCAAAGGTCCCCAACTCCAGGTTAAGTGACATTATGCAGGCAATCTGACACTGTTTATGGGAGTATTTACACCCACAGAAATCAGCAAACATTATAAAATAGGCCTTAACTTACTTTGTAACTTAATGTCTGCACTTAAGACAGAAGTAGCATATGTTAAAAATTCAGACTTATCTTAAATGTGTATAATATATCTGGTCATTACATCATGCATACTAAAGAAATTGAGGAAAACCTGAGAACATATTCTTTCAGTATTCCAAATTCTGTGCAGACGTCATTGACATTACTGGCTAATGGGTGAACTCTCACAGATGTCTTTCTTGTTTACCTGCTCTCCTATTTATCAAAAAAAGAGAAAATGGGGAAATAAAAGAAGACAAGAGATAAGAACCAAACAAGACACATAGGTAAAGAGATATTAAGAAACAACACTCAACCTCAAGAATCCTGACAAATGCAATTAAAATCATGATTTCACACTGCTGTTAATGGTCATCATTGGAGGTATCAGCATGTATCCAGTCTTAGATTTTAACATAGGTTCAAATTTTGGGTCATATGGTAGCTTTATTCCTAGTTTTTAAGAAATCTACATACTGTTCTCCATAATGTTTATATCAATTTCCACTCTCACCATATACCCTGAGAAAACCATAATTCAAAAACATATGTGTTCCAATGTTCACTGCAGCAATATTAAAATAGCTAGGACATGGAAGGAACCAAGATACCCACTGTCAGATGAATGGATAAAGAAGTTGCGGTATAGAGTATTAGGCAGCCATAAAAAGTAATCAATGTGTCAGTTCTAGTGAGGTGGATGAACTTAAAAGCCCATTATACAAAGTCAAAAAAGGACAACAAATTATAGTTTACTTATGCACACATATGGAATCTAGAAACACGGTACTGATTAACTTATTTGCAGGGAGAGAACAGAAATACAGACACAGAGAAGAGATTTATTGACACAGCAGGTGAAGGAGAGGGTGAGAGGAATTCAGAGTATCATTGAAATATACAACTACCACGTGTAAAATAGCTAGTGAGAAGTTGCTGTGCAACACAGGGAGCTCAACTCAGTGCTCTCTGACAACCTAGAGAGGTAGGATGGAGTGGGGGAGTGGTCAAGAGGAAGGATACATATGTATACTTATGGCTGATTCATGTCACTGTATGAAAGAAACCAACATACTGTAAAGAAAGTTTCTAAACAAAAATATCTTTAGAAATGTTCGTCAACTCTGCTTCCTAATGATGGGGGGGGGGGGGCAAGT TCONS_00087745 TCONS_00087746 TCONS_00087748 . 3' 1401 TCONS_00087745 TCONS_00087746 TCONS_00087748 . 3' 2912 EMBV3_25731 GAGAGATCGCGGCGCTCACGGACTTCTCCGAAGGTGCTGGACGAGTGTCAGAACCAGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30874 GTATTTGAAGCAAGTTCTCGGGCAAATGGTCTTCCTGGGTTATGTGGACATGCTTGGTGT Variant GeneID:506203|PSMB4:NM_001034266:61_cdna 373^519 2 EMBV3_30701 GeneID:506203 3 GENE PSMB4 MGC127020 proteasome (prosome, macropain) subunit, beta type, 4 EMBV3_04352 TGTAGGTACACACAAATTGTTCAAGTTGTTAGAGCCTCAGTAAAAATAACCAGACATTCC Gene GeneID:280934|SULT1E1:NM_177488:5_cdna Constitutive 2 NULL GeneID:280934 6 GENE SULT1E1 STE sulfotransferase family 1E, estrogen-preferring, member 1 EMBV3_13646 TTGGCCCACCAGTTAAAGAACCTCCTACAGATGTTACTCCCACTTTCTTGACCACAGGGG Gene GeneID:511200|GMPS:XM_002684965:244_cdna Constitutive 0 NULL GeneID:511200 1 GENE GMPS NULL guanine monphosphate synthetase EMBV3_22686 CAGAACGCTGTCCCTTGGAGATGGTGACTCAGAAAACCTCCTGGGAGACAGGAAGTGCAT Gene GeneID:281409|PLOD1:NM_174148:13_cdna Constitutive 0 NULL GeneID:281409 16 GENE PLOD1 PLOD procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1 EMBV3_28316 TTCCCACACGTTGCATAGGCTTCTGATGTGGATATCAGCTACACTGTACAAAGGAAAACG Gene BVT0102_060880 + 0 NULL GK000020.2:5238710-5327774 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24830 GGAAGAGGAATAGAAGGGGTGGGAGAAGAGGCTCTAGTCTAAGCAGTCACTTAAAGGAAG Gene GeneID:781718|USP27X:NM_001145075:120_cdna Constitutive 0 NULL GeneID:781718 X GENE USP27X NULL ubiquitin specific peptidase 27, X-linked EMBV3_27484 CCCAGGTTTCTGTATTATTTTGCCTGTTTCTTAAAAGACCTCTCATCAGGGGTTGCTGTG Gene BVT0101_042462 + 0 NULL GK000001.2:69942823-70026905 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05497 GGAAAGGCGGGTGTAAGATCAAAGAGATCCGCGGCCAAGATCGGTGCAGCGACGCTGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27019 GCTGACAACACCATCCCCCATTTCTTCTGTGACCTTGGTACTCTGCTCAAATTGTCCTGC Gene GeneID:510571|LOC510571:XM_002691562:19_cdna Constitutive 0 NULL GeneID:510571 11 GENE LOC510571 NULL similar to Olfactory receptor 1J2 (Olfactory receptor OR9-19) (OST044) (HSA5) (HTPCRX15) EMBV3_04155 ACTATACAAATGTGCCGGAGAAAGAGCCAGGTGATTTGCATGGGAAGCTAGATGACCTTT Variant GeneID:504618|PPEF1:XM_002700377:31_cdna 239^514 2 EMBV3_42478 GeneID:504618 X GENE PPEF1 NULL protein phosphatase, EF-hand calcium binding domain 1 EMBV3_22437 GGGGATTGTGTAACATCGAAGATCTGTCCTGGTCGTTAAGCCTGGAGCGTATGGAACTGA Gene BVT0102_254340 - 1 EMBV3_37542 GK000005.2:19280029-19351074 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19957 ACTTTGCTCTGGAATTAGGAAAAGAAAGGGCCTGCTGCTGTGGCCAGAATGAGCCTAAGG Gene BVT0102_087745 + 0 NULL GK000030.2:132949884-132976387 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01102 GGACACATTTGGAGCAAGTGGGGATAAAAAAGAACTTAGCCCAGAGTCTCAGTCAAGGCC Gene GeneID:539267|LINS1:XM_002696501:79_cdna Constitutive 0 NULL GeneID:539267 21 GENE LINS1 NULL lines homolog 1 (Drosophila) EMBV3_39616 ACTGGGCGGTATGGACTGCGGGGAACGCCTGCACATTTTGGTCATGGTAAAGGGAAAATA Gene GeneID:507385|ZBTB49:XM_002688427:40_cdna Constitutive 0 NULL GeneID:507385 6 GENE ZBTB49 ZNF509 zinc finger and BTB domain containing 49 EMBV3_15664 GGTCTAACATCTGTTCACAGTTCATTCTGGCGTCCTTGGTGTCAGCATCTCTAACGCTGG Gene BVV0102_239199 + 0 NULL GK000010.2:67861115-67863305 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017692 TCONS_00017698 TCONS_00017693 TCONS_00017695 TCONS_00017696 TCONS_00017697 TCONS_00014445 TCONS_00017694 2 XLOC_009085 XLOC_008308 Coding TCONS_00017692 XLOC_009085 Coding Coding DLGAP5 10:67861583-67908867 j TSS12041 4598 1 TCONS_00017692_3 786 0.0637233579817312 18 0.903136433813421 0.00308297116921035 0.0018574675495267 0.000918334709526283 0.00101467246112951 0.00153573558648353 2.62603662008375e-05 0.00269846352199489 0.000521216622908872 0.00297172807946107 3.58965965157875e-05 9.96421580397356e-05 2.43539804451575e-08 6.45268605485807e-05 3.04624110244168e-12 0.00024243054594694 0.0046583449848803 4.66429744696766e-21 0.00339500206973223 0.00401199804177173 0.00191212849177496 5.21637831674822e-05 0.000630060322062841 0.00169210170228542 0.00251025684815237 0.00353815004663129 0.00154623183847329 1.08194602704719e-06 7.05479252250141e-07 0.000137007323777271 1.67677273695804e-09 XM_005211807.1 DLGAP5 PREDICTED: Bos taurus discs, large (Drosophila) homolog-associated protein 5 (DLGAP5), transcript variant X2, mRNA. 0.0 2928 99.82 0.354501957372771 NM_014750.4 DLGAP5 Homo sapiens discs, large (Drosophila) homolog-associated protein 5 (DLGAP5), transcript variant 1, mRNA. 0.0 1950 85.34 0.354501957372771 TCONS_00017692_3 sp|Q15398|DLGP5_HUMAN DLGP5_HUMAN Disks large-associated protein 5; 0.0 1200 72.39 0.987277353689567 1 coding 0 0 0 0 -0.0354504176030164 0.898745548384632 -0.0337011484976621 0.641630002382212 GTGCGGGAAGTTTGAATTTTGTCGATTCTTGCTGTAGACGTTGCTTCTTCGGAGGCGCGGTGGTCTTCCAGGACCAGAGAGTTCCTTTTAGTTTGGTTGAAGTTTAACGCTAGAAACTGCCTCAGGATGTCTTCATCACATTTTGCCAGTCGGCACAGAAAGGATTTAAGTACTGACATGATTAGAACTAAAATTGCTCATAGAAAATCACTGTCTCAGAAAGAAAACAGACATAAGGAATATGAACGAAATAGACACTTTGGTTTGAAAGATGTCAACATTCCAACCTTGGAAAGTAGAAGTCTTCTTGAATTAGATGAGACATCTCAAGAGCTTGTTCCAGAAAAGGCCAGTATCAAGCCAAAGTCAACAAAAACTGTTGTCTTTGATCAACGAAAACAGATGCTCCAAAAATACAAAGAAGAAAAACAACTTCAAAAATTGAAAGAGCAGAGAGAGAAAACTAAACGAGGAGTATTTAAAGTGGGTCTTTATAAACCTGATATGCCTTGTTTTCTTTTCTCAAACCAGAATGCTATGAAAGCTGAGCCAAAAAAGGATGTTCCATCTTCTGTACGGATTACAAGGTCAAAGGCCAGAAACCAAATGGAGCTGACTAAGAGTGGTAATGGGATTGATGTTCGAGCAATCCGACCTGGTCAAAGACAGACTTCTGAGAAGAAAGTGTTGGACAAAGAGAAAAAAGCTGTACAACCTGTAATGCTGCCGGTGAGAATGACTCGATCATCTACTCAAGCAGCAAAGCAGATTGTCAAAGAAATCCCGTCTACAGCAGCAAGAAAGCCAGAGTCAAGGGCTGTTAATGATAATGAAGCAGACAGAAAAGCACCAAATCAAGGAAAACCTGCCAAAAAGATAGGAACAAAACCTGACAAGGTCATTTCTTTTAAAGTTGATAATGAAGAAAATACTTTGGATTCACAAACCAGTGCCACAAATGGAATGAATCCAGATGGAGTCTTATCAAAAATGGAAAATGTATCTAAGACGAACAGTGCAAAAATGAAAGGGAAAAATTCCTTTGCACCCAAAGATTTTATATTTCAGCCATTAGATGGTCTGAAGACCTATCAAGTAACACCTATGACTCCCAGAAGTGCCAATGCTTTCTTGACACCCAGTTATACCTGGACCCCGTTAAACACAGAAGTTGATAAGACTGAAGCAACAAAAGAAATCTTGGCACAAAAATGTAAAACTTTCTCTGCCAAAACAGTACCTCAAGATTCAAGTAAATCACAGTGTCCTTTGGGTTCTTTAACAGTTTGGAATAAAGGAAAGGAAGAAGTCCCATCACTTGAAGTAAATGAAGATCAGCTTTCTCAGCCACAACATGATGTGCCGTATTTCAGAAATATTCTCCGGTCAGAAACTGAGAAGTTAACTTCACACTGCCTTGAGTGGGACAGGAAACTTGACTTGGACATTCCAGATGATGCTAAAGATCTTATTCGCACAGCAGTTGGTCAAACAAGACTCCTTATGAAAGAAAGGTTTAAACAGTTTGAAGGACTGGTGGACAATTGTGAATATAAACGAGGTGAAAAGGAGACTACCTGTACAGATCTGGATGGATTTTGGGATATGGTTAGTTTTCAGAAAAAAGTTGTCTCAGGTATAGCAAGTAAACCCAAACAGGATGATGGTGGAAGAATTGCTGCTAGAAATCGCCTTGCTGCCATAAAAAATGCAATGAGAGAGAGAATTAAGCAGGAGGAACAGGCTGAGGCAGCAACCTCTGTAATGCCAAAGGAAGTGGATAAAATAGTGTTTGATGCTGGATTTTTCAGAATTGAAAGTCCCATTAAATCATTCTCAGGACTTTCTTCTGAATGTCTTTCTCAAAGACTTAAAACACCTCAGTCTGTCAGCAAAACTGTGTCTGAGACCAGGGCTGAGATGGGCCTTATAAGACAAACTACATCACCAGAGAATCCTGGTCCTCAGGGTGCCAAAAGTGAACATGTTGATAAGACTTTGATTTCATGTATTCCTGGAAACAGGAACAGCATAGGAGAAGATGCTAAGTGTCTTGGATTACAAGATTTAATTGAAATAAACCATGGTATAAATAAAATAAACTTTGAGATAGATTGTTTATCTAGTGAAAGAATGAATTCAGCTCTCCATGCTGGCAAAGTAGCAGATGATATTAATACTAACAAAAAGGAAGAAATTTCAGATATTGTGGAAGGAATGGAACTAAATTCAGTTACAACACAGGATGTTTTGATGATTAGCCCTGAAAAAAATATACAATCACAAAATAACATCTCATGGGAAGAAGAAACGAAAACTTCTCAGCCAGTATTATGTGATAATAAAAGTCTCACTACTGAATGCCATCTTCTTGATTCAGTGGAGAGAAGACATCAAGAACAGACCAGACACATTTCCTTTGGTGGTAACCTGATTTCCTTTTCACCTCTGAGGCCTCTCAGTGGAGAACAACCAGAAGAATTTTAAATTTAAAAATAAATCCAGACATTTTTCTTCATGTTATCAGTGCTATGTTCTTAGAATATTGAAAAGTTGAAGAGTGTTTGTGTTCACTGCTGTTCAAGCCACTTGTAGACTGTTGGCCCTCCTTAGGTGGATGCAGAACCTGTGGATACTGAGGGCCTGCTGTTAAGAGATGTAAGCATCCTTGAATTTTGGTATCTGTGTGTGTGTGAGGAGAGGGGGTGATCCTGGGATCAATCCAGCCACCCGTCTCAGGATTCTGAGGAATGATTGTGTAATATTTTAATATTCAGTGTTCATCAAAGTGTATTTTAGATATGATACTATTTCTCAAGGGGAGTGGGGATATGCTGTATATTAACCAATGCAGAATAAAAATGTACTGTGCCTTGCCTCTCTTGTTTAAAATGTATAAGCTTAAGTTAAGTATACCTACTCAGAGCTTACTAACATTCTTCAGTTTAATTGAAATATAATGTTAAACTTTGACAAATATTTGCATTCTTTTATACTTTATTCTTAATTTGAACTCTTAAATTTGTTGATATTGAACAGCTTGCATATTGCATTTTCAGGGTATGTTGAGTTTCTTTAGATATCAATCAGTATATTTGAAATACTTTCTCCTTTATAAAACTCTTGACTATAGGATTGTAGAAGACAGGGCCATCAGTACAACAGAGCACTAAGATGACTCATAGTAGCGAAAGCTTGCCATCAGACCTGGGGCCAGTTATTTCTGTTTGCAAATGAGGTGAGTGTTGGAGGTATTCACCAAACAAGCAGCAACTTTATGGATAATTCTTTAAGATGAGGGCCTTCCAAACAAGAAAGGAAAAGCACATCCACTTTTGTTAGAGGAAGTTGTGTTGGGCTTGTAGAAAAGACAGTATTATCAAAGTTGGGAGTTTTCTAAGGGTCCAGGGCCATGAACATGTAAAAGAGATGAGTACAGAGCAACCCTAGACTTAGAACATATACAAAGCAATATGTAATATAACAATAAGATAATATTTGCCCTCAAGGATAGAGTCAGTGTGTGCATGCTCAGTTGTGTCTAACTCTTTGCAACCCTGTGGACTGAAGCCTGCCAGGCTCCTCTGTCCATGAGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTGATAAAGTAGATGAGAATAAAACAGTATCAGTCAGTAAACATGATTTTTTTTTAGGTTTAATAAGATGTACTGTTGAATCACTTAGAAAACTTTTGGCTGTTAAGTAACAATGCAGTGAACTCCAATTGGCTTAACAATAAGGAAGTTCATTATTATAATGTTGTCATGGTGATTTCAGGCACTTTACAGTCAACAGCTCAATGATGCATCAAGGTCTAACATCTGTTCACAGTTCATTCTGGCGTCCTTGGTGTCAGCATCTCTAACGCTGGGTCCTTTGGGGTGATAAGATGGCTGCTAGTGGTACTCAGAGCTATGTCCTTCCCTTTAGTTTGGTTAGGCCAACTAATGCCACATCTCCATCTGCATCTCATTTGGGGTTTACTTAATAAGGATTCCCTGTTTTACCTGGGATTATACCTGGGTAAAACCAGGACTGTTAGGTAGCAGGGAATGAGTCAGGTAGGCAGCCATCAATATGCCCTACAACTAGATGGAGTGTCCTTGGGCTACTGGATTCTAGACTTACGAGGTATTAAGAAAACCTTTAAAGACAAAATGAAAGAAAACTGGGTAGAACCAGAGCTTTTCCAAAAATGAAAAAAGAAATGGGATGAAGTGAAAATATGAAGGCCTGTCCCCCTCTTAACAATGCTAAAGGATCATCCCAGCTCAGAGTCCCTGTAGGGTAGACTGAGGCGTGGATGCTCCACTTCTCTCTCTGCCCAGTCGTGTACATTCTTGTCTTCACAGCTGTTGAGAGAAAGAGCATATACTCCCTCATAAACCTCCTGCATTCTGATCTCTGCAGGAGATCATGGTTGAGAAGATGGTACTGTAGAAACAGCAACAGATCAAATAATATTTTGGTTTTCTATAAAATGAAGTGGTCTGAGCATATCCTAGTTTTGAAATTATATTAATCTTTGACCCTCCTGGTAATGAAGAAGGTTAGAAAGGCATGGT EMBV3_37873 TGACCCCCAGCTTCCTGAAACTGCTACTGGATGCCCCAGAGGAGGACCCCAATTACCTGC Gene GeneID:614334|DERL3:NM_001076323:100_cdna Constitutive 0 NULL GeneID:614334 17 GENE DERL3 MGC142482 Der1-like domain family, member 3 EMBV3_23898 CATGTGCCTGTTGACCATCTCACCTGTTCTCTCAGTTCCCTCTCCCACTATCCAGTTTTG Gene BVV0102_108691 + 0 NULL GK000001.2:58244154-58428031 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07060 CAGCAGCTTTGAGGATGATCCCTTCTTCTCCATACAGATGTCAGCCCCTTTCAGGCAATG Variant GeneID:533379|MLF1:NM_001038158:143_cdna 137^284 2 EMBV3_22946 GeneID:533379 1 GENE MLF1 MGC133499 myeloid leukemia factor 1 EMBV3_26866 GTGGGCTTCATACCCTGGAAGGAGAAGGATGGTGATGTTTAGGTATCTCTTAGCCTGTGG Gene GeneID:515371|PDZD11:NM_001037603:56_cdna Constitutive 1 NULL GeneID:515371 X GENE PDZD11 MGC133775 PDZ domain containing 11 EMBV3_16184 GAATCTATCCTTCATAAGTGCATCAAAACATCCTTAATGGATCAGTACTTTGCCCGAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30796 ACAGTTGAATGTACCCAAGCTTTCTGTATGTGAAAATGTGGTTAATGTGCTCATTGTCGG Gene GeneID:780855|PPIP5K2:XM_002689420:22_cdna UTR3_Alt 2 NULL GeneID:780855 7 GENE PPIP5K2 HISPPD1 MGC143083 diphosphoinositol pentakisphosphate kinase 2 EMBV3_10909 GAAGCAGGGTACCATTGTGGATAGAAACAGATTTTATACTTTTCACTGGGAACTTTGGGG Gene GeneID:505563|KCNK1:NM_001075207:75_cdna Constitutive 0 NULL GeneID:505563 28 GENE KCNK1 MGC142788 potassium channel, subfamily K, member 1 EMBV3_42017 GTGGCCATGCTCAACACCGCCGTCAACTTCGGCCTCTACTGTTTCGTCAGCAAGACTTTT Gene GeneID:538511|GPR142:XM_002696219:292_cdna Constitutive 0 NULL GeneID:538511 19 GENE GPR142 NULL G protein-coupled receptor 142 EMBV3_25986 GGTAGCACCAGTCACTTTTGCGTCTATCGTAGAAGAAGAGCTACAGCAGGAAGCAGCTCT Gene GeneID:540885|IBTK:XM_002690046:7_cdna UTR3_Alt 2 NULL GeneID:540885 9 GENE IBTK NULL inhibitor of Bruton agammaglobulinemia tyrosine kinase EMBV3_30841 CTACGTAAGCGGCTCTATGAGGAATATGGTGTGCAAGGCTGGGCCATTGTTCAGTTCCTG Gene BVT0102_278058 + 1 EMBV3_04236 GK000007.2:51411766-51421164 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213412 TCONS_00213414 TCONS_00213409 TCONS_00213410 TCONS_00213413 TCONS_00213411 1 XLOC_130448 Coding TCONS_00213409 XLOC_130448 Coding Coding LOC100848816 7:51359809-51419436 j TSS159873 6471 1 TCONS_00213409_10 1599 24 0.89187602723644 0.000461894452640948 0.000700825756112483 0.000750097356855773 0.000201671081917532 0.000504338525471763 7.60726129042711e-05 6.00484800654301e-05 0.00012619744627987 0.000827465817796847 0.000256524093054723 1.34428107665344e-05 8.44382201209727e-06 3.7441921617896e-06 0.00038353509976164 4.91873061339667e-06 0.00928952230354128 0.000685362183681507 0.00315337087087513 0.000160621804452684 0.000520477013190821 4.85948857462826e-05 0.00179235395597851 0.00167646453768387 0.00236993067990848 0.000524814274424724 0.000442094121210073 0.000288237702202486 0.000795073756839295 0.000739149417285338 0.000735014776630893 XM_003582422.2 KDM3B PREDICTED: Bos taurus lysine (K)-specific demethylase 3B (KDM3B), 0.0 1.161e+04 100.00 0.995054860145263 NM_016604.3 KDM3B Homo sapiens lysine (K)-specific demethylase 3B (KDM3B), mRNA. 0.0 9355 92.21 0.994745788904342 TCONS_00213409_10 sp|Q7LBC6|KDM3B_HUMAN KDM3B_HUMAN Lysine-specific demethylase 3B; 0.0 3148 96.51 0.999374609130707 0 coding 0 0 0 0 -0.0419130026303577 0.785037199213295 0.00662784414745146 0.903062477140028 GGAGTTGTCACCTATCCTGGAAACAAAATCTTTGTAGAATTTGATGGCTGTAACTGGAAGCAGCACTCCTGGGTTAAAGTTCACGCTGAAGAAGTTATTGTACTTTTGCTGGAAGGGTCTCTAGTATGGGCACCTCGGAAGGACCCAGTCCTCATCCAGGGCACTCGAGTCTCAATTGCACAGTGGCCAGCCCTGACTTTCACTCCCCTGGTAGATAAACTCGGTTTGGGTTCTGTGGTTCCAGTTGAATACCTTCTGGATCGAGAGCTTCGTTTCCTGTCAGATGCTAATGGGTTGCATTTGTTCCAGATGGGAACAGATGGCCAAAACCAGATTCTTTTGGAACATGCTGCTCTGAGAGACACAGTTAATGCTTTGATCAGTGACCAAAAGCTACAAGAGATATTCAGCCGAGGTCCCTACAGTGTTCAAGGTCACAGGGTCAAAGTGTACCAGCCAGAGGGAGAAGAAAGTTGGCTCTGTGGTGTTGTAAGCCATCAAGATTCCATCACCCGTCTTATGGAAGTGTCTGTAACTGAGAGTGGTGAGATCAAGTCCGTAGATCCCAGACTGATCCATGTGATGCTCGTGGATAATTCGGCGCCTCAGAGCGAGGGGGGTACGTTAAAAGCAGTAAAATCTTCCAAAGGAAAGAAGAAGAGAGAGAGCATAGAGGGGAAAGATGGCCGGAGGAGGAAAAGTGCTTCGGACTCTGGGTGTGACCCTGCATCAAAGAAATTGAAAGGAGACAGGGGTGAAGTAGACAGTAATGGGAGCGATGGAGGCGAGGCAAGCCGAGGGCCCTGGAAAGGAGGGAATGCCAGTGGAGAGCCAGGGCTGGATCAGAGAACCAAGCAGCCACCGACTACATTTGTCCCCCAGATTAACCGCAGCATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGCCTGTGGGTGGGGACACACCTCTACCTTTCACTCCGTATTCTGCAGCCACAGGTCAGACACCTTTGGCCCCAGAGGTGGGTGGAGCCGAAAATAAAGAGGCAGGAAAAACACTGGAACAAGTTGGCCAGTGTATGGTGGCTTCAGCAGCTGTGGTCACTACCGCCAGCTCCACCCCAACCACGGTGAGGATCTCAGACACTGGCCTTGCAACAGGGACTGGGCCGGAAAAACAGAAAGGCAGCTGGTCGCAGGCCCCAGGAGAGAATTCAAGGAATTCTGTCCTGGCCTCTTCTGGATTTGGAGCATCACTCCCGGGTTCATCACAAGCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGGGTTCTTGCCACAGAGAACAAACCTTTGGGCTTCTCTTTTGGCTGTAGCCCAGCACCAGAGTCTCAGAAAGACTCTGATCTCTCCAAAAACTTGTTTTTTCAATGCATGTCCCAAACTTTACCCACCAGTAACTACTTCACTACCGTTTCAGAGAATTTGGCTGATGATTCCTCCAGTCGAGACTCATTTAAACAAAGCCTTGAGAGCCTCTGTAAAGGAAGATCCACTCTTGGAGCAGACACTAAATCAGGCTCTAAGGCTGGCAGCTCTGTGGATCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACGCCAGCCTTCCCACGGAGCCTCCTAAATGCCCGCACCCCAGACAGTCATGAAAATCTATTTTTACAGCCCCCTAAACTGTCCCGAGAAGAGCCTTCTAACCCTTTCTTGGCATTTGTGGAGAAAGTTGAACACAGTCCTTTCAGCAGCTTTGCATCTCAGGCATCAGGTAGCTCTTCCTCTGCTACCACTGTCACCTCCAAGGCAGCACCCAGCTGGCCCGAGTCTCACTCCTCTACAGATTCAGCATCTTTAGCAAAGAAGAAAACCCTCTTCATCACAACTGACTCCTCCAAACTGGTGTCTGGTGTTCTGGGCTCAGCTCTTACCACTGGGGGGCCAAGCCTCTCTGCCATGGGGAATGGCCGCTCCAGTTCACCCACCAGCGGCCTCACCCAGCCCATTGAGATGCCTACTCTCTCCTCCAGCCCCACAGAGGAGAGGCCAACTGTGGGGCCTGGGCAGCAGGACAATCCTCTCCTTAAAACCTTTAGTAACGTCTTTGGCAGGCACTCAGGCAGCTTTCTGTCCTCCCCAGCAGATTTTTCACAGGAGAACAAAGCTCCTTTTGAAGCTGTGAAAAGGTTCTCACTGGATGAGCGAAGCTTGGCTTGCAGACAGGACTCAGACTCCAGTACCAATAGTGACCTGTCAGATTTAAGCGACTCTGAGGAGCAGCTCCAAGCCAAGACCGGTCTAAAGGGGATTCCGGAACACCTGATGGGGAAGCTGGGCCCCAATGGGGAACGCAGTGCTGAGCTGTTGCTGGGAAAAGGCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGACTGCTCCCTTGAAAGTGGGCCAGTCAGTGCTGAAAGATGTGAGCAAAGTAAAGAAGCTGAAGCAGTCCGGAGAGCCCTTCCTGCAGGATGGGTCTTGCATCAATGTAGCCCCTCACCTGCACAAGTGTCGTGAGTGCCGCCTGGAGCGGTATCGGAAGTTTAAGGAGCAGGAGCAAGATGATTCCACTGTGGCCTGCCGCTTCTTTCACTTCCGGAGGTTGATCTTCACTCGAAAAGGGGTACTCCGAGTGGAAGGGTTTCTGAGTCCCCAGCAAAGTGACCCTGATGCCATGAACCTGTGGATTCCCTCTTCCTCCCTAGCAGAAGGAATAGACCTAGAAACCTCAAAATACATTCTGGCCAATGTTGGAGACCAGTTCTGCCAACTTGTGATGTCTGAGAAGGAGGCCATGATGATGGTGGAGCCACACCAGAAAGTGGCATGGAAGCGAGCGGTCCGAGGTGTACGGGAGATGTGTGATGTATGTGAAACAACCCTCTTCAACATCCACTGGGTTTGTCGCAAATGCGGATTTGGGGTCTGCCTTGACTGTTACAGGCTCAGGAAAAGCCGACCGCGCAGTGAGACAGAAGAGATGGGTGATGAAGAGGTTTTCTCCTGGTTGAAGTGTGCAAAGGGGCAGTCCCATGAGCCAGAGAATCTCATGCCCACACAGATAATCCCTGGCACAGCTCTTTACAATATTGGAGACATGGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATTAGTCGGCAGAACAAATCTGTGTTGAGACCTGCTGTCACTAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAATGAAACCACCTTCTCAAGCGGAGGAGGAACTGCACCGGGAGCACAACCAGAGACAGACCATGTTCCCAAAGCCGACAGTACTGACAGCAGATCAGATGAGCCTCTGAAAGCAGACAGTTCGACATCAAATAGCAATAGTGAGCTAAAAGCCATCAGGCCCCCTTGCCCTGACACAGCCCCACCCTCCTCTGCCCTGCACTGGTTGGCGGATTTAGCAACTCAGAAGGCTAAAGAAGAAACAAAAGAAGCAGGGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGATTCGTTCAACTCCACTGCAAAGGTCTCTCCGTTGACTCCAAAGCTTTTTAACAGTCTGTTACTGGGTCCCACTGCCTCCAACAACAAAACTGAAGGCTCTAGCCTTCGAGACCTCCTCCACTCCGGGCCAGGAAAGCTTCCTCAAACCCCCTTGGACACAGGCATACCCTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAACAAGGCCAGCCTACCCAACTTCCTTGACCACATCATTGCCTCAGTGGTAGAAAATAAGAAAACCTCAGATGCTGCAAAGCGGGCCTGTAACTTGACTGATACCCAAAAGGAAGTGAAGGAGATGGTGATGGGGTTAAATGTGCTGGACCCCCATACCTCTCATTCCTGGCTCTGTGATGGAAGACTTTTGTGTCTTCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCCGGGAGTGTTGGAAGCAAGGCCAGCCAGTGCTGGTTTCAGGAGTACATAAAAAGCTCAAGTCTGAACTCTGGAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCAGGATGTGGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTCTGGGATGGCTTCGAGATCATATGCAAACGATTAAGGTCAGAAGATGGGCAGCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGGGGAAGATTTTCGGGACATGATGCCAACAAGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAGCGAGATGGCAGGCTCAATCTGGCCTCCAGGCTACCCAGCTATTTTGTAAGGCCCGATCTGGGCCCCAAGATGTACAATGCCTACGGCTTGATAACAGCAGAAGACAGAAGAGTTGGCACAACAAATCTTCACTTAGATGTGTCTGATGCAGTTAATGTGATGGTGTATGTTGGGATCCCCATCGGGGAGGGTGCTCATGATGAAGAGGTTCTCAAAACAATTGACGAGGGAGATGCTGATGAGGTGACAAAGCAAAGGATTCATGATGGAAAGGAGAAACCCGGTGCTTTGTGGCATATCTATGCAGCCAAGGATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAGCAAGGCCAAGAGAATCCCCCTGATCATGATCCAATTCATGACCAAAGTTGGTACTTGGACCAGACCCTACGTAAGCGGCTCTATGAGGAATATGGTGTGCAAGGCTGGGCCATTGTTCAGTTCCTGGGAGATGCTGTCTTCATACCTGCTGGAGCCCCACACCAGGTGCACAACCTATATAGTTGCATCAAAGTCGCAGAAGACTTCGTGTCTCCAGAACACGTAAAGCACTGTTTTCGCCTGACGCAGGAATTCAGGCATCTCTCTAACACTCACACAAACCATGAGGATAAACTGCAGGTGAAGAACATCATTTATCACGCAGTGAAAGATGCTGTTGGCACCCTCAAGGCTCATGAGTCCAAGCTGGCAAGATCGTAGGCGTGGAGAAATTTCAAACTCCCCTGTGAAGCAGGTCTTTCACTCACAACACATACAGGGAACGACAGGGTTCTCTGCTGGAGCAGAGGTCCTTCACTTGGAGCCAGTGTGGTCAGTATTACAAACTCTCCAGCCACTCTTTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGCACTGTTCACACACACAGTTTCAGACTCCAAGCCGAGGGTGCCACATCCCTATCCTGTGGCCTTTTGGGACTTCAGATTGCCTGAACATCACTGGGCTGTCCTGCACATTCTCATGATTTGAGATTTGTGGAAACCAGGAATGTGGGCACACCTTTCTTTTTTTTTTCTCTTGTGCCTAGTTAAGTGGGAATGTGTTTGGAGGTAGGGGGAAATCACATACCTGGTACATGTGGGGGCTAATTGTTTAAACACGCCTGGTGGAAGCCTGATGGTGTCTCTACACATGACCTCTGACACAGCCCATCCCAGGAGATGGGTGAAGCCATTCCCCACCATCTCTCTCCCATGAACACTGAAGTCTTGAAGGACCCAGGGAGAATCCACTGCTTTTCCCAAGAGGCTCCAGGATTAGGAAACGTGTGTATTTAGTGAAAAATAGGTTTGTAGTGAAATAGTTACTATTTCATGAAAGTAGATATTTTTAGAACTTTTGAAATACCACAGTTTTTTTCCTGGATTATGAGGAAAGGCACATTACATTTAGTCTTCCTTCGAGAAAACTCTTTGAAGAAATAAGATTTTTAGAAATCAACTGCCCATTATAGCACAAAAATCAGCCAAAGCAGAATTTAAAAGAATTGGCTTTTTAGGGTTCTTTTAATTTCACCCCCCTCCCATCTCAGCCCTATCTTGAGGGAACAGCCATCTTGAGAAAGAACTTTGTCGTGTCTGAGCTGTGGTGTGTTCCATGCATACACACACTGGTGACTCCAGGAACCATTTCCACCTATTACCAGCGTTCCCTTGGGACTCCTCTTGTAGTTCCAAATTCAAAGGAAAGTTTGCTTTCCTACATGAGGCGTTTTGTTTTGGGAGTTTTTTTGTCCAGAAATATTTTCAGCAAAACTTTCCAACTCAGTGGAGTTTTATTAAGAATTTATTTGAAAATGATGGAATTCATTGGCCCATAGATACATTGGAAAATGTATCTATCTTCTTCCCAGCTGTACTGTAGTGCCCTGCAGGCTTGTTTATATGTTCACAGTTACTTTTTTTTTTTTTTAATAAAAGTCATTTACTGTAGAATACTTTTAATTTCACTTTCTGTATTTTAATTTTGTTGAAGGGCTGATTGGGATTTCCATGTTCTTATTAAAAATCTAACAAATCTGTTCATA EMBV3_07149 ACCAGAGCACTCACAGACTCAAATGCTGCTGCCACACACAACTCAAGAGCTCGAGTATTT Gene BVV0102_171607 + 0 NULL GK000022.2:57903714-57916364 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127613 TCONS_00127616 TCONS_00127610 TCONS_00127609 TCONS_00127615 TCONS_00127612 TCONS_00127614 1 XLOC_077695 Coding TCONS_00127610 XLOC_077695 NonCoding Coding MRPS25 22:57865192-57915832 j TSS95414 6747 2 TCONS_00127610_2 150 0.00459463465243812 3 0.866822014652738 0.000222472239608647 0.000569725161598734 0.00019356213932473 0.000263106773830473 0.000145976958442668 3.96752077856648e-05 8.39539732924983e-05 2.87305231918509e-19 5.25962834485633e-05 2.32328599681426e-16 0 1.95292108664956e-31 9.44609490440743e-18 2.34523543617062e-05 3.43772814190768e-06 0.00171257940644225 0.000500487855025451 0.00227540458488197 0.000876683990833123 0.000142053641931043 0.000121303301573993 0.00108533147309705 0.000364263520201781 0.000458551159507233 0.000373081626485416 0.000481222263994199 0.000369008355473893 1.87243855223372e-77 4.71353397196155e-05 6.87887628481189e-05 XM_005223130.1 NR2C2 PREDICTED: Bos taurus nuclear receptor subfamily 2, group C, member 2 (NR2C2), transcript variant X1, mRNA. 0.0 8159 100.00 0.670372017192826 XM_005265401.1 MRPS25 PREDICTED: Homo sapiens mitochondrial ribosomal protein S25 (MRPS25), transcript variant X1, mRNA. 0.0 884 84.99 0.1108640877427 TCONS_00127610_2 sp|P82669|RT25_BOVIN RT25_BOVIN 28S ribosomal protein S25, mitochondrial; 3e-25 97.8 100.00 0.293333333333333 0 noncoding 0 0 0 0 -0.335589969805761 0.340958237671481 0.00571578320621301 0.950879866570629 AGTGGAAGCCGGCGCTGAGGCGAGGCGGCCGGCTGGGAGCAGGGGAGCTGTCGGCCGTGCTCGCTTCTCCGCGCTTCTGGACTCGTGGCCGGCAAGCCGGCCCCGACTCCGCCGCCGCCATGCCCATGAAGGGCCGCTTTCCGATCCGCCGCACCCTGCAGTACCTCAGTCAGGGGGACGTGGTGTTCAAGGACTCGGTGAAGGTTATGACGGTGAACTACAACACGCACGGGGAGCTGGGCGAAGGCGCCAGATTCTGGGGAGCAAGTGCTCGTGGACGTGGAGACCAAGAGCAACAAGGAGATCATGGAGCACGTCAAGAAGATCCTGGGGAAGAACGAGGAGACCCTCCGGAGGGAGCGGCAGGAGCGGGAGCAGCTCTCCCACCCGGCGCACTTCGGGCCCCGGAAGTACTGCCTGCGGGAGTGCATCTGCGAGGTGGAGGGCCAGGTGCCCTGCCCGGCCGTGGTGCCGCTGCCCAGGGAGCTGACCGGCAAGTTCCAGGCCGCCCTGAGAGCCGGCGCCCAGGACTGAGGCCCCGAGAGCCCCGCTGCTGTGCCCCGGGAGACTGACGACTGCTTTGCAATAAAAGGGCCCCCTTTACACACGTGTGTGAAAGCACATTGCCAGGGGGGGTAGGGCTACAGCCAAGCTGCTCAGTGAACACCCCGCGCCATCACGCCCGTGAAGTCCGCGCCACTGAGCAGCGCCGTGTGACCCCGTCCGCTGGGCCTTCGGCGGGGACGGGGCTTCAGGGCCGGGAAGGGGCCAGGCCGCAGCCTGGAGACACGCGCCTGGGTCCCGCGGCCGCCGCGGTGTGGAGGCCTGCCGGGGGCGAGCCCGCTGCACTGACGCCCCTGACCGCGGGGCCCCAGCGGAGCAGAGCCTCCTGCGCGGCCGGCTCGGGGTGCGGCGCCACGGGCTCTGGCCGGGACCTCTTTCCTCACAGCGCGCCGGGTCGCGTTGCTTTCAGGCCTCAGGAGACAGGGCTGGGCTGACCCCGAGCGCGCCCCGGGAGATGTGTATAAACGCTGCGGGCTTATCTCACTGTAATACAAGTTTGGCGCTCTTCCCATTTGATGCTCGGGTGGTGATTTACTGTGATTTTGTACCAAAGCCGCATTCAGGGTGGTGGTCTGAATGCGCGGGCTGGGAGGGAGGTGGGCGTGCGCGTCTGAGGAGGAATGGGCAGCTCCTGAATGGCCACGGGCTTCTGACGGGGGTGGTTCACTGAAACTCAGCGCCCTCCCCCACCGCGGTACTGGAGGGAAGAGCCTGTCCCCCGTTCTGCCGCCTCCCCGCGTGGGGGTCTCAGTCCCGCCCTGTTTCTGATGCCGCACCCGCTGAGGGCCTTCCCTCTGGCCGGCTGGGCTTGTCCCATAAATGGGTGCCCTTCCAGACTGTCTCCAGAGCGCAGCGAGACAGCCTCATGCAAACAGCCTTTCCCTCCATGGCCACAGGGGCGCCCTAATAAGGTTGCTGAGGAGGAGCATCACCCAGAACCAAGGTAGGTGCGGACCCCTCTCTAGAGAAGGATGTCCAGCCGCTCGCGGTATGGCGCTGCTGTTCTGGACCGTCTTGTCGGCAGCAGGTAACAGGCTGCATTGGCACTGCCGGGGCGCTGTGCTCTCCTCGTTTCCTACTTTAATAGGGACAAAGATGGGTTTAAAATTTGCAGAAATCGGAAGCAATGATAGAGAAGCTTGCTATGAGGATCTTATAATGGATATACTTTAATTTGCATAAGCAGTGTTCACTAGACGGTTTTTGGCCTTGTCCTATTGAAGTAACCCATTTCAGTTTCATTTTGACTTCTACTTGGCAAAGCCATTTAAAGCTGCCAGTGGTTTCTGCCACAAGTCTGACTGGACCTCAGCATCCTCACCTGTAAAACGAGCCATCAGGTGACACAATGAGGGGTGTTTTTTTACCCCCTGGATAGCAGAGACCCTTCCAGGAAGCCTGGCTCTGCGAGTCTGTGTCTGCATCTGGTGGCACAGGCTGTGTTCTCCAGAAAGGTCTGCGTGGCTTCTGGAAGACGCAGAGGAGACAGTCTGGCCAGTGCTTCCCTTGAAGGTACTTACAGCCCAGTGACCACTGAACACGGTGTGGTGTGAGTTGCACGGCTCTGGCACCGAGGTGCCTCCCTGCCACATACTTGGGGTTCAGGGTTACTGATGTTATTACCGTTATGAGGAGAAATGAAGAGCAGGATGTACGTTATGAGTTTTTAATTCACTTTTAATAGTATAAACCTCATTTAGGTAGTAGTATTAAGCCACAACAATAATGCCACATTGAAACAGCATTTAATAAAATGCATAAAGCTAATTCATGCACTGCAATACTCTATATACAAACACAACAATGCAAATTCTTCTTCAAGACTGAAGACATTGATCAGATATAAAATTCAGTTTAAAAAGAACATGCTATTTTTTAAATGCCATCACATAAACAAAGCTGATTTCAAGCTACAGCTTTCAACAGATTTTAAACCTGGAATTAAAATGTGATGGCATAAACAATATATTCTATATTGTGAAGGGCAGAGGTTACAGAAACGGTCCCAAGAAAGTTACACCCAAATTTTCCTTTAACACACTTCTTTTAAAGGGGTTGGTAATGCAGGTACATTTTAACAGAGAGCTCTGAACTACAGGTAAAAACGATGGTTTGTACTATGAAAACTGCAGCTTTCAGGTATAAAACTAGTTGAACACTGGTTCACAAGATAACTGGGAGAACAGAGACTGTAGAAAAATACTCGAGCTCTTGAGTTGTGTGTGGCAGCAGCATTTGAGTCTGTGAGTGCTCTGGTTGTTAAAATAATTGATGACACTTTTCTAAAGAAAAGCCATTTTTTATATATTTCCAAATGTCATCCAAGTGTTAAGCTTTATCACAGTTTGTCAATTGATAAATATTGCTGAGCCTTTTTTCCTAGCATATCTCAGACATTCCTCACCCCTAAAACACTCTTAAAACTGAGAGTTTATTCCTAGACTAGTTAAGGTACATAGCCCCAAGGAGAACTTCTGCAGATTCCTTTAGAGACTGCTAAGCTTCCACTTGTATTTTGACTGGAGAGCCCCCTTCTATAGAGTGATTGTCACGACAGGTAAGGACGTGGGAATGGATGAGGCCACTGAAGTTAGCAGGAGCTTTGTCACATCAAAGCCGCGGGAAGCCGAAGGCTGCACACCCGCCGTCTCACAAAGGCACCGAGGACTGTGGTCTCAACGCGGTGTTTTCAAACGTTTCAATAAGCTTCGTGTTTTTTTTTTTAAGTAGCCTGTGGTGTCTGAGTTTTCGTACTTATCCAGTGATCCTTCCAGCAGGCCGGCTTTCGGCCTTCTCACCATTCAGGTCTCCTGCTTACAGGTGCGTGAGCAACTCCTGCTGGGCCCTGGCTCCCGAGTGCGGTGTCTCGGCTTAAAGCTCGATTAATGGGGAGAGTTCATCGGAACAGACCTGGACAAGGACAATTTGGCATCTGTAGTGTTAAGGTATATATCTGCACTAGAATGCAAGTTTTATCTGAAATTTTAGAATCATAATTTAGGAATAAGGGCAGTGAATTTTATTCACATGCTACAGTTAGAGAAATAAAAGATCTGTAATTTATATGCCATAGGAGTTAGCTCAACATTCATGCTTATTTTTCAAGAATACTTGTTTTGTAGCTGTGGTAGAGAGAGTCCCAGAGCACGTGTGGGCGGCTTCCACCACACTGGGAGTCAGGGCCCACCACACAGGTGTTCTCTGTCTTGGGCTGAGTGCGTGAGAGGCCGACACCACTCCTGCCAAGGTCCTCCCAGTTAGGCTGTAAATAGATGTGTAACAACTAGGTTACCGATCCCCACCTCGTTTTGGACACTGGGATAAACTAATGTCTTCCAGCTTCCTGGCCCTGGTGGAGGGCAGGGCCTTTCCCAGCCAGGCTCACCCCAAGGAAAATGTCAGCAAATCCATCCTGCTGAGGGACCAAGAACACCCACGTCAATGACTGTAGCAACTCTATCATAGATTCTCTGTAAAACGTAAGCGGTCTGGCTATGTGGCTACGTGTCTGTATACAGAATATACATCTATGTACACATATGCTATATACACTGTACATACAGAGAGGGTATAAACACATGTACATTCAGTCAGTCATACAAGCCTATAAATCTGTACACACAACGCCAGTGCAGGGACCCCAGGGCTGGACACACACAAGTGCCCGCTAGGAGGAGGCACGGGTGAGGAAGCCCGGGGCCCTGTGTACAAAAGACTCAGGCCGCTCTGTTGTGAGGAGAGGCTGACGCTGCAAACTGACATCAAAGTTAAGACATTTTCAGAGTCGCACAGTCAGTGGGGAAGGGAAGTGGGACCCTGGAGGATGTGGGTGGCTGCCCTGCCTTGTTGGGCCTTCCCAGGTTGGGAGGGCAGCAGCCTCCAGAGTAAAGACGTGCACATCAGATGTCACCTGTAGCCCCAGCGCACATAAGGCCACTCCCCCTGGCAAACGGGCAGCATGCTCCTAGGCTCTCATCTGTCCTCAGGCCCTGGAATTTGGGTCCTCAGCCAAGGGCTGCCTGTGAGGCCGAGGGTAGGGTGGAAGCAAGAGTGCTCTGCTAGGCGTTCCCCCAAAGGCCAGGACAGGAGCACTGGACACCGCGAGAGCCCCACGGGCACCCGGCTCTGCCACACAACCCTCGCCAGAGGCCACGTTTACTACTGACGGGCTAGAGACCAGTGCCTCTCCAGGGCGATCACACAGCATCCAAAGGGTGACTACATGAGACCAGATCCAAAAACCCGGACAGAAAGGACCCCGACCACAGCTCCTGGCAGAGCTTAGAAAATAAACGATGTAGACCCCCCTCCCCCCAAAAAACCCCACACACTTCCTTAAAAATACTTTCCAGGAATACCTTGGAAAATACCTGCTTGAGTAATTTGGTCTTTCTCTGTGTCATCTTGTTATGTTACATGTAAAGAACTCCACACTTTGAACATGTAACTGTCCCCGCTCTTTGAGACGCCCCTGGAGCAGAGCCCGTGTCCTCAGGAAGCAACACCGCGCGTCCATCCTCGCCTCCCTCAGGTGCCCTCGTCCCCTCTGCTCTGCGGTGGGGCCACCAGAAGGCAGGTGTGAATGGTCACTCAGATGCAGAGGGCGCGCTCTCTTCCCCGAATCAGAGTCTCACAAACTACTAACAGGTGAAGAGCCCTGTGAAAGTTGAGGCTAGGTATTTGCTTCCAGTCTCTCTAAATAATTTTTGACTTTGGGCTCTTCTTAACCAATTTGACAGGAAAGGGATGGGCCTGCTGTCAAAAGGTTTGAAATGATTAGGGGCGGTGAGAATTCAGGTTGTGTGGAACCGACTTTTAAGGAAAAGACCACTTCAAAGTAAGGCCAAGGCGATCTGGGACACTAAAGAGGAGTGTTCAGAGCCCAGAATGGTCCACTGGAGTCAGCCATCAGCAGCGTGGGGACTCGGGCGCAGGACCCGGTTAGACTCGGCGACTGTCCCAGGGCATCCTGCGGGCGCGGGGCACGTGCCTATCCCAGTGTTCACTGTCTCCCCGCCGCTCCCACCTTCTACTCCCAGCCTGTCTCAACAGCACCTCGGCTCAGGTCTTGGCTAAGCTGCCCTAATACCTAAGGCCACCTGAGTGTAAAGGCCTCACAGAGACAGGATGATGCCCCAGAGAGCAGGCCAGTGTTGACCTAACCATCACTGAGAGCTCAGACCTAAAAGATGTGACACAGGACGACACGTGTTCCCAGGGAGCTGCTCCAGGACCCTCAGACATGCTCCCATCAGAAATCAGGACAGACAGGCGTGCACCTCACTACGTAAGAGTGCCTCTGCGCAAGCCCTCCCAGGCAGAGATGGAGACCCACCCTGGCCACCCTCTCGGCCAGCGTCCCATCTTACTTTTGAAACTTAAGTCACTCTGAAATTAGAAAACCTGAATTGTAAGCTGGCAATATTAAATCCTTTCCATCATTTTACAATGGGTATTACACTTTTCTCTAAGACTTGCTTCAAAGCATGAACAGTAAACGATAATGAGATACAAACAGGAATATCTGTAAGTTGGAGACAGTGTTCCCACTTAATTCCCACCAATGACTCTCTAAGTGCTCCCGACGGCAACGGGGCGCCATCTGGTTCTGCCTCGAGCCCATGTGGTGGCCTGGCAACCACCTTCCCTCCCCGGCATCACGCCACCCTGCTGCTCGTCTGCCCTGGGCCTAGGAGGGACCATCTGATCCAAAGGTTTAAGAGCTGCAAACCTGGCCTCACTGTACTTCCTTAACCTGGGCCACACACACAGCGCGGACACCTCATGCAGCCTTGCTCTGCTTCCCAGTAGAAACCTGCTGCTTGCTTACAACCAGGGGCATCTGTGAGCACTTTTCTCTAGGTAAACTTCCCAATAACTGCATTCTGTTTTAATAAAACAATGGTCACTAAGATGACTTTGGGGTTAAAGGCTGTTTTTAAGGAGCAGGCAGCCTGCCTTTTCATCCATTATCTAAAACACGCCAGGGGTCATCTGTGGACACAGCCCTGGAGGACCCCAGCGTGCCGCACCAGGAGCGTCGAGAAGCCTGCCGCCCGAGGCAGTGTGGGCCTGGAGATGCTGAGAGCCGCGCCGCATGGCCCCACCGGTCGGCTGCGGCCTGGCCAGGCGCGGGGCGTGCACCGCGGAGATGACAGCCCTCCCGGCCCTCCCCCGAAGACT EMBV3_33423 GTAGGAGGATTCTTTACCAACTGAGCTATCGGGGAAGCCCAATCTCCTATGACCTCATGT Gene BVT0102_319441 + 1 EMBV3_24739 GK000007.2:92391410-92404696 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214536 TCONS_00214535 1 XLOC_130716 Coding TCONS_00214535 XLOC_130716 Coding Coding POLR3G 7:92401404-92414827 j TSS160443 841 1 TCONS_00214535_1 141 0.223543400713436 5 0.937714200566235 0.00195078734699528 0.00422766535241066 5.61359738661479e-16 0.000655988382048342 0.00132503496632892 0.000699470013652439 4.30183778445404e-40 0.000630064789311192 0.000744587267116367 0.000498204688916803 3.42704071256428e-05 3.180887360512e-05 4.72693032608363e-05 0.000178621988835047 0 0.000192109281324746 0.000696533871668585 3.22189720980351e-53 5.70298813303311e-05 8.63644515696549e-42 2.76153375551369e-05 7.17552171600313e-05 0.000243232733712183 2.01907316445506e-136 0.000172374771227005 0.00200858194440199 0.00025113442397657 5.09065180819412e-87 0.000209888795784711 0.000157171849365343 XM_005209731.1 POLR3G PREDICTED: Bos taurus polymerase (RNA) III (DNA directed) polypeptide G (32kD) (POLR3G), transcript variant X1, mRNA. 0.0 753 100.00 0.494649227110583 NM_006467.2 POLR3G Homo sapiens polymerase (RNA) III (DNA directed) polypeptide G (32kD) (POLR3G), mRNA. 3e-120 435 91.00 0.368608799048751 TCONS_00214535_1 sp|O15318|RPC7_HUMAN RPC7_HUMAN DNA-directed RNA polymerase III subunit RPC7; 9e-65 201 92.16 0.716312056737589 1 coding 0 0 0 0 -1.00795321470151 0.0257044127994957 0.0171851554542598 0.745894819382879 TTTCTACCAGCTGAGCCACAAGGGAAGTCCAAGAATACTGGAGTGGGTAGCTCATCCCTTCTCCAGTGGATCTTCCCAACCCAGGAATCGAACCGGGGTCTCCTGCATTGTAGGAGGATTCTTTACCAACTGAGCTATCGGGGAAGCCCAATCTCCTATGACCTCATGTTAATTTTATTACATCTCCAAAGACTTTATTTACAAACAAGGAAGGTCATATTCACAGTTCCAATGGCTGGGAATAAAGGAAGAGGACGTGCTGCTTATACCTTTAACATTGAAGCAGTTGGATTTAGCAGAGGTGAAAAGTTACCTGATGTCGTATTGAAACCACCCCCACTGTTTCCTGATACAGACTATAAACCAGTGCCACTAAAAACAGGAGAGAGTGAAGATTATGTGCTCGCCTTGAAACAAGAGTTGAGAGAAACGGTGAAAAGAATGCCTTATTTTGTAGAAACACCTGAAGAAAAACAAGATATTGAAAGATATAGTAAAAGATATATGAAGGTGTACAAAGAAGAGTGGATACCAGAAGCTGCCTGTATGCAGAAGCCTAAGTCACGTTTACAGCATTGGTTGCCTTCCTGAGTTGCAGCGTCTCTTTTCAATGCTAATTGCTGATAATGTTGTGTCCCTCTGGAAACACTCCTCTTAGGTCTCTCATTTCTTCTACTACATAAATATTTGTCTCTAAATGATTCTCTTTAAGTACTTTGTCGTGATCACCTATGGATCATTTATGAAAGCAAACATATTAGGTTGGTATAAAAGTAATTCTGGTTTTTGTATTGTTGAACTTTGTTTTTTGATACTGGAATACATTCTTAAATAAATGTGG EMBV3_15131 GTGTAGACTACTCTCTGCTGTGATGGCATTGCAGGATTCAGACATAGAGGACATAAAACA Gene GeneID:540672|CDH12:XM_002696420:4_cdna Constitutive 0 NULL GeneID:540672 20 GENE CDH12 NULL cadherin 12, type 2 (N-cadherin 2) EMBV3_12207 GGGTGAGAACCGACATGGGGGGATCCAAAGCCTTCAAAAGCCTAGAAGAAGGAATAGAGA Gene GeneID:510180|MGC127133:NM_001035086:27_cdna Constitutive 0 NULL GeneID:510180 1 GENE MGC127133 NULL 20-beta-hydroxysteroid dehydrogenase-like EMBV3_04256 GTGGAAGAGGCCCTGGCCAAGAGGTTCCAGGTTGCCCCTGCTAGAGCCATGGAGGGGTCT Variant GeneID:506560|C12orf10:NM_001035038:18_cdna 766^947 4 EMBV3_15152 GeneID:506560 5 GENE C12orf10 MGC134440 MYG1 protein EMBV3_15008 TATGGATGCATTGCTCAAGCAGTAATGAGGATCAGGTCAGCTCAAGCCTGGCGAAAAGCC Gene GeneID:516274|LOC516274:XM_002697420:132_cdna Constitutive 0 NULL GeneID:516274 23 GENE LOC516274 NULL similar to olfactory receptor Olr1686 EMBV3_41317 TAGATGTGTCTTTTCCTACAGCAGGCCCACAGTTTTTGTCAGTTGAACCAGTGCATTCAG Gene GeneID:788043|INPP5F:XM_002690171:2_cdna Constitutive 0 NULL GeneID:788043 9 GENE INPP5F NULL inositol polyphosphate-5-phosphatase F EMBV3_12793 TGAGGAACATTGCCATATTAACAAAATTTCCTTCCAATCCATGAACACGGATGTCTTTCC Gene GeneID:767875|HMGN5:XM_002699936:91_cdna UTR3_Alt 1 NULL GeneID:767875 X GENE HMGN5 NSBP1 high-mobility group nucleosome binding domain 5 EMBV3_01176 AGCCTGCTCAAGTCACACCCTTAGCACTGTCTCAATGTGGCTCATCTGGTCCCACGTCTT Gene GeneID:531014|LOC531014:XR_084557:94_cdna Constitutive 0 NULL GeneID:531014 10 PSEUDO LOC531014 NULL similar to Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta chain 4) (Beta-V spectrin) (BSPECV) EMBV3_38231 CCGGACACTGGCATCTCGTCCAAAGCCATGGGCATCATGAACTCCTTCGTCAACGATATT Gene GeneID:521580|LOC521580:XM_002697507:208_cdna Constitutive 0 NULL GeneID:521580 23 GENE LOC521580 NULL similar to histone cluster 1, H2bd EMBV3_33850 GCTGGAGAAGTGGGACTGCTTTATGTGTTCCAGCTCATCTACAAAGTGTCTCTCTATTCC Gene GeneID:536181|UBXN4:NM_001035414:2_cdna Constitutive 0 NULL GeneID:536181 2 GENE UBXN4 MGC128072 UBXD2 UBX domain protein 4 EMBV3_07637 TTAGGGTGATGGGAGTCAAGTGTGAACAGGAACTGGGATTTAAGGGCCATTCTTTGGGGG Gene GeneID:518441|WDR53:NM_001075772:62_cdna Constitutive 0 NULL GeneID:518441 1 GENE WDR53 MGC133797 WD repeat domain 53 EMBV3_16939 CTCTTCCAGATGGACGTGGGGTTTGGACTTCTAGGGGAGATGCTGGTGGCGCTGGCTGAT Gene GeneID:509424|CCDC103:XM_002696045:336_cdna Constitutive 0 NULL GeneID:509424 19 GENE CCDC103 NULL coiled-coil domain containing 103 EMBV3_28968 ACGAAACCGGTGCTGGGCGCTTCAGGCAGAGCAGTTGCAGTTCTGGAGCATGGAGTTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37241 TTGTTTTCATTGTGGCGGGTGAGAAAGAGGATGGGGAAGAGATGGAGATCGGAGAAGTGG Gene GeneID:337889|LRRC41:NM_001045873:38_cdna Constitutive 0 NULL GeneID:337889 3 GENE LRRC41 MGC137526 MUF1 leucine rich repeat containing 41 EMBV3_19460 TGGTTACAGCTTTTCGCTGACTACATTCAGGGTACTTGTGCACAGAGCTCGAAAACTAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21796 CGATCCCGGCTCCGCTACTGTGATGTCATCTTCTTGCGCCTGGCCAAATTATATCAAGAA Gene GeneID:100140607|LOC100140607:XM_002686714:59_cdna Constitutive 0 NULL GeneID:100140607 4 GENE LOC100140607 NULL hypothetical protein LOC100140607 EMBV3_11567 GCCACCGCCACCAGACCGTCCCTAGCAGGCGTCATTGCACATTCAGTCCTTTATGAAATT Gene GeneID:516024|VAPA:NM_001075733:113_cdna Constitutive 1 NULL GeneID:516024 24 GENE VAPA MGC140014 VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa EMBV3_08752 TTCAAGACCATCGAGGACCTGCGGAACAAGGTTTGAGACAGAGCAGGCCCTGCGTGTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02694 TCAAGGTCCTCTTCCTGGTGCTGGGCTACACTGTCCTGGCTGGCATGGTCTTCATCAAGT Gene GeneID:505294|SLC39A3:NM_001015521:11_cdna Constitutive 0 NULL GeneID:505294 7 GENE SLC39A3 MGC137788 solute carrier family 39 (zinc transporter), member 3 EMBV3_04674 AACTACAGTGAGCACGGGACAACGGTGGACAATGTGCTGTATTCATGTGACTTCTCTGAG Gene GeneID:507057|PHF12:XM_002695669:178_cdna UTR3_Alt 1 NULL GeneID:507057 19 GENE PHF12 NULL PHD finger protein 12 EMBV3_31242 CTGTGGACTGCTGGTTCTGCTGACCTGGATCATGAGTGCTCTGAATTCCTTGATACAAAG Gene GeneID:100301421|LOC100301421:XM_002688670:90_cdna Constitutive 0 NULL GeneID:100301421 7 GENE LOC100301421 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_37394 TCTGAGGAGTCGTATGAAATGCCAGTGCCAGAATTCCAGAGCATGTTTGTCATCCCCGGG Gene GeneID:789808|LOC789808:XR_084115:79_cdna Constitutive 0 NULL GeneID:789808 X PSEUDO LOC789808 NULL similar to oxysterol binding protein-like 1A EMBV3_35783 GCAGGCGACTTCTTCACCAACTATGCCACCTGGGAAGCCCACCATCATCACAAACAACTA Gene BVT0102_024723 + 0 NULL GK000013.2:55522527-55530680 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049124 1 XLOC_029255 NonCoding TCONS_00049124 XLOC_029255 NonCoding NonCoding - 13:55526088-55528061 - TSS36300 1973 3 TCONS_00049124_5 92 0.101875316776483 1 0 0.000517195433617321 0.000127324401941731 0.000872399077492302 0.000719720922933151 2.50237199212941e-05 8.88370636734508e-05 0.000209858593992344 0 0.000415901464883231 0 0 0 2.90854797144287e-06 0 0.000101953640909741 0 0 0 0.000292579788499284 0.000127572246694242 0.000906253888555278 0 0 0 0.000979749325325045 0.000153550471431765 0.000344481293493265 0 0 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 8e-50 203 82.93 0.101875316776483 0 noncoding GGCCTGAAGCTAGAACCTTTTGGTTTCATGAGTCACCAAATGCCCCTCTTTTCCTAAAGCCAGCACAAAATAACATTTTGTAATGTGATGGCCCAGCTTGGCATCCCTCTGTCTTGGGGTGGGGGAGGGGAAAGAAACATTCCTGCTCATGAGACGGCTCTGTCTTTAATAAAAAATGAGGAAGTGAGTTAATCATTTAGTAAATAATAATTAGTTGTTTGTGATGATGGTGGGCTTCCCAGGTGGCATAGTTGGTAAAGAAGTCGCCTGCCGATGCAGGACACCCAAGAGACAAGAGTTCGATCCCTGGGTCAGGAAGATCCCCTGAAGGAGGAAATGGCAACTCACTCCAGTATTTCTACCTGGAGAATTCCATGGTCAGAGGAGCCTGGTGGGCTGCAGTCCCTAGGGTCACAGAGTCGGACGTGACTGAGCACACAACACAACCGTTGATTAACAATGTGATTCAAAAATGTCATGACTGGTGGTAGGAAATAATGACTGTTGGTATGTTAACATACCGGCTCTAAGGAAGGAAGGGCAGGATGCCAGGCTTTTGGCCTGTGACATACTTCCCGTCCACAGGTCACCAGGCACTCTGCCTTGGCTTAAATTCCTTCTCCACTGAACAGGGCACCCGCACAGTACCCGGCGTCCTGTCCCCAGGGTGGCAGGCTCTGTGTCCAGAGGAGTGCCTTGCTGTGGAGCTTGTCAGACACAAATCTCAGAGGGGCACAAAAATATCCTTCAAACGAGAAAGAAGAAAGACAGGAGAGAAGGGAGGGGCAGGGAGGGTTTGGAGCAAGGGGAGGAGGGGGTGGTAGTGCTGGGCTAAAAATGCATCTGTGACATTCCAGAGTCACCGGCTTCCAAATTCAAACACGTCAAACTGGGTGATCTGTAAACGCTCTGCTTTAAATGCTGGACAGTCCTCAAAGGGCTCAGCAAGCCCTGGTTCTGAGCAGAGGTATGGGATAGGGACTGGCCTGCCCTCCGCCCTGGGCCCCAGTTTGGCAGAACCCCAGATTCCCGAGTAGCCACGGGGGTGGGCAGGTGGATGGACCATTCCTTGCTGGCCCCTCCCTGATGCCCTTCAGGGCCCAGGGCTTTCTGTGTCAGCTGAGGCTCTGCTCTGCCTGGGAATTGTCTGCCCCTCATTTCAGCTCCTCAAACCTATTAATTCATACTCAAGTGTGATGGGCTAACTACTCTAGAGAGGGGAGATGTGCACTTTAACAGAGGACCATCTTTGAATTGAAAGGAGTCAAATTCTAAACCAAGTGTTTCAAATTGCGAGACACTCCGGGTGGGGGAGGACCGAGGATGGACGGTGTCTACACGCTGTCCTGAGCTCCCATGGGGCCCTGAGTCAGAAGCCCATGTCACTGAGGATGCCAGATCACTGAAAGAAGTCAGTATCCCTCGGTCCGAGCTCCTGGATGGAACCTCCATGCTGGGTCAGCAGCCCTGTGGCCCACACGGAGGATTCCTGGGACCAGCGCTGGGTGCTCCCCGGAGGCCCGCTAATCAGCTATGGACTGCAGACAGCCCTCCGTGGTCCTGACGAGCCGGCTGGCCCAACCTGATCAGGAGAAGGCAGCCACGTGGGGCGGTGCCACCATCACTACTGCTGGGCCACCCAAGGACACCAGAGGGCAGCTGGCTGAAAGTGAGCACTTGGTGCTGCCCTGGCATAGGCCATCGGGGTGGGCTCTTTGCCCCTCCAGGGATGGGAAGAAGGCAGGACCCTGATGGGTGGAGCCTCTCCCCCAGGTGGCCCAGTCCAAAGCCCTCCCTCCAGGGCCAGCGTCAATAGGGATGTGTTTGCGCAACCTCCCCCTGCTTCACCTTCACTTCCGCCATCAGATAAAACAGCTCAGTGCAACCTGGATTTCAGAGTCACAACAAATAATCTGGTGGCTAAGTACCGCATTCTTTGTTGTGAGTCTGAAATTCAAATCTCAGAGAGGTGG TCONS_00045659 TCONS_00045660 TCONS_00045661 . 3' 172 TCONS_00045659 TCONS_00045660 TCONS_00045661 . 3' 2144 EMBV3_37905 ATCCGTGGAGCCCTCAGTCTGTTGTGGGACTTCTGCAAGCATGGCATCAGGCTGCTAAAT Gene BVV0102_166813 - 1 EMBV3_39824 GK000012.2:20887978-20888725 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036450 TCONS_00036454 TCONS_00036452 TCONS_00036455 TCONS_00036451 TCONS_00036453 1 XLOC_021156 Coding TCONS_00036450 XLOC_021156 Coding Coding INTS6 12:20886165-20907709 j TSS26538 4943 1 TCONS_00036450_3 571 12 0.771108944900896 0.000953403913345617 0.000442211334750483 0.000553381192091063 0.000206620346992992 0.000305308004215174 0.000274668256835111 0.000306759804258366 0.000126005862153868 0.000498984645396743 0.000501873068515943 1.78056454752598e-08 0.000481545096221195 3.38577421148739e-05 0.000194318405744883 0.000384715041207275 0.00164306029750229 0.00130824264514251 3.74878289094579e-10 0.000816514029745264 1.78291580773294e-05 0.000327799145183268 0.000969102109705487 0.00150365109626683 0.0016694363994689 0.000663473143270337 0.000447838679784404 0.000583241332293773 0.000109213691467275 0.000187237190247655 0.000612461662217141 XM_002691744.3 INTS6 PREDICTED: Bos taurus integrator complex subunit 6 (INTS6), mRNA. 0.0 3283 100.00 0.367995144648999 NM_001039937.1 INTS6 Homo sapiens integrator complex subunit 6 (INTS6), transcript 0.0 5366 84.17 0.993728504956504 TCONS_00036450_3 sp|Q9UL03|INT6_HUMAN INT6_HUMAN Integrator complex subunit 6; 0.0 1130 97.37 0.998248686514886 1 coding 0 0 0 0 -0.127508826803875 0.270462750928702 -0.0269571573062203 0.575784520872705 GTCAAAGTGGTGGAGCAGAGGCCAGATGAGCCACCTCGTACATCTCATCCTATAGTGAAGTTCTCCTGTACAGACTGTGAACCCATGGTTATTGACAAATTGCCTTTTGACAAATATGAGTTGGAACCTTCACCACTGACTCAGTTTATCCTGGAAAGAAAATCTCCTCAGACATGTTGGCAGGTATATGTGAGCAATAGTGCAAAATACAGTGAACTTGGCCATCCCTTTGGTTACTTGAAAGCCAGTACAGCACTGAACTGTGTCAACTTATTCGTGATGCCTTACAATTACCCAGTGCTCCTTCCCCTTTTAGATGATCTGTTTAAAGTCCATAAGGCAAAACCAACTTTGAAATGGAGACAGTCATTTGAAAGTTATTTGAAGACAATGCCTCCCTACTATCTTGGGCCTTTGAAGAAAGCTGTTAGAATGATGGGAGCACCTAACCTAATAGCAGACAGTATGGAATATGGACTTAGTTACAGTGTCATTTCATACCTCAAAAAACTGAGTCAGCAGGCCAAAATAGAATCTGATCGAGTCATCGGTTCTGTAGGCAAAAAAGTAGTACAGGAAACTGGAATTAAAGTCCGAAGCAGATCACATGGTTTATCAATGGCTTATAGGAAAGATTTTCAACAGCTGCTCCAGGGTATTTCAGAGGATGTTCCTCACAGACTGCTGGACCTTAATATGAAAGAATACACTGGGTTCCAAGTTGCTTTGCTCAATAAGGATTTGAAGCCACAGACGTTTAGAAATGCATATGACATACCAAGACGGAATCTTTTGGATCACTTAACAAGAATGAGATCTAATCTTTTGAAGAGCACCCGCAGATTTCTTAAAGGACAGGATGAAGACCAAGTGCACAGTGTTCCTATAGCACAAATGGGGAATTACCAGGAGTACCTCAAGCAAGTACCTTCTCCATTAAGAGAACTTGATCCTGATCAGCCGCGGAGGTTGCATACATTTGGCAACCCCTTTAAGCTGGATAAAAAGGGTATGATGATAGATGAGGCAGATGAATTTGTGGCTGGACCTCAAAATAAACATAAACGACCTGGAGAACCAAATATGCAAGGTGTCCCTAAGAGACGACGCTGCATGTCTCCACTGCTGAGGGGCCGGCAGCAGAGCCCAGTTGTGAACAACCACATCGGAGGGAAAGGACCACCGGCACCTATGACCCAAGCACAGCCAGACCTCATTAAACCCCTTCCTCTTCATAAAATTTCTGAAGCCACTAATGATTCGACAATGGATGATGTGGTTGAAAATCATGTTGCAGACCAACTTTCATCAGATACTACACCAAATGCTATGGAAGCTGAATTTTCAGGATCTTCTCCAGCCAACTTACTGGAACGACCAACCAATCATACAGAGGCTCTCGGTCACGACCACTTAGGAACTAATGACCTCACTGTTGGTGGATTTTTAGAAAATCACGAGGAGCCCAGAGATAAAGAACAATGTCCTGAAGAGAATATACCAGCATCTTCACTCAACAGAGGAAAGAAATTGATGCATTGCAGAAGCCACGAAGAGGTCAACACTGAACTAAAAGCACAAATAATGAAGGAGATCCGAAAGCCAGGAAGAAAATATGAAAGAATCTTCACTTTACTGAAGCATGTGCAAGGCAGTTTACAAACAAGACTAATATTTTTACAAAATGTCATTAAAGAAGCATCAAGGTTTAAAAAAAGAATGCTAATAGAACAACTGGAGAACTTCTTGGATGAAATTCATCGAAGAGCCAATCAGATCAACCATATTAATAGCAATTAAAAGAAAAGAGAATGTGGCCACTTATTTCACTACCTTCTCCAAATACAAAGTAAATACAAGACTGTTGTGATCTTGCATTCATTTTTTGACATGCATTGTTGGCTTTTTGAAATACTAAGAGCAAGTCTACAGATCCTTTTTCCATCATTTTACAGTGACCTTTTCTTCATTTTGGTTTATTTTTGTAATGTGAAAAGTATCACTCTAAAAAAAACATTTTTATTTAACAAACTAAAAATATTCCTCCAAATCTCTTGCTTGTCATTGACTCTTGCGTGTCAATTTCCCTCAGGTTCTATTTTCTTAAACCAACCTTCAAAATTGTCACCTCTGTTAAGGTTGAACTTTGCCAAAAAAATAAAAAAGTTACTTTGTAATTTTTGGGGAAAAAAAAGCACATACATTAAAACTAGGCAATGTTTTGTATATACAGTTATTTTGGATATATTATTGTAAGTTGTACAAATGTATTTTGAAGAATATTTAAGAAAAGCACTTTTGTTATTCCATCAATAAATGCTCTATTTTACTCTTGTGTGGTTTAGGAAATAATCACATTTAAAGTAATCATTTAAAACCATCTTAAGATAATGGAATTTTAAAGGCATTGCTTTTTAGCATTGGAAAAATACACCACTTGAAGTTCACATTTGTTAAACCTAACTGTAATGACATGTTACATAATCTGCATTGTCTTTTTACTCTATGTTCTTAGATTTTGTTGGCCACTCCGACACACTCCGTTTCTGCCTAGACAATGGAAACGTATCTGCGGATAGGCAGACTCTTAAAAGCTGTTTCAAAAGCAGACACCTTTGAACTCTATTGGTTTCCTTACTTCCTTTCCTTCAACCCCTCCCTTTTCCTTTCTCACCAGGACTGTGGTGAAGCTGTCAGGGAGTTGTAAATTTGGGGGACACCACATACTCTGAAATGTGTAGCATTTAGCAGCCTGATGCCATGCTTGCAGAAGTCCCACAACAGACTGAGGGTTCCACGGATCTCTTTGTTCTGCTCTGCTGTTACACTTAAACTGTCCATTTCCTTTAGAAGCTAAATGGAAAGGAAACACATTTTAAATGACTTTGTCCATTCTGCATTCTCCCTGAGTTGTCCAGGATAAGGAAAAGGCAACGCTATTCACTATCCACCCTCAGTCCACTGTGGCCTCACGTGTCCTTACTGAGGACTGTGAGCCTGTGGCCTGACTCACTCACCATTCATAGGTCACTGCTGTGCCTTTTAGTGCTTCGGGGATAACGAGTAGAAAAGAAGGCTAAAACACATTTAGATTAAAAGAGGGTAAAATAAATTTATAAAATTATGGCAAAGTGGAAGTATTTTTAGGTTCATAATATTTGAAAAACACATACCCTTATCTTTGTACACCTCAGCAGATCATTTTTTAAATTTCAGGGGTATAGGAAAATGAAATTGTAATTTTTGAAGAAAAGCATAGATAAAGTGGAGAACATGCTTGAGCTCTGTTATTTCAGTGTAGGGGGTTCAAAACTCTCCCAATACTGAAGACAAATGCTGTCAAGAAAAAAACATAATGTAGTGTTACATAGTATTTTCATATGCAGTTCTTTAAACATTTTTTTTAAACCTCTTAAAAAATACCTCTGAGCAGGATATTACTTAGTAAGTGGAATTGTTAAGGTATTAATAGTTAGCTGCAGTCACATGGCTAAATTCAACATCAGATACACAAAATCCAGAATATATTGTCTGGTTTTAAATTATATATGTTTAGATTCTGAGATTAACAGAAGAGCTTTACAAGTCATTCAGATAAAAGTTAATATTTAACAAGAATGTTTAGTAAAGCAACTAAATATTCTGTCTGTTCCAACATTTGCCCACTTTTCCTTATCAGAATGTTCTTTCTTGCATTTCACAGGTTGCTCATGAGGTGATCCTTTAGACCCTTGATCCTTAATATATTTCAGGGTATGAACCCTAGGTGGAGTTGGCAAGAAGCAGTTTGTGTTGTCTCCTCTTGTCCTTAATCTCTCTGCCACCATACTCCGTCTACGCTCTTACCCCAAAATACAGTCACAAGCTTTGAAACCCATAAAAATTCAAGCTTAATATTTTATTTCTTGCAGAGCTTTTTTTATTTGTTTTTACAGATTAAGAAACTGGGCGTGTTAGTTAAATTACTGAACTACTACAGCAAAGGGGAAGTGGGAGTACATGGAGGGGAATATCATGTCTTTTAGGTCCTTTAGATCACTGGATGGCTGACTGTAGGCTGGACAAGTGATGTTCTCCAACAGTTTAATCTTGAGGTGAAGATCATTTTTGGTAATGTTCTTACATGTGTCCCATTTGTCAACTGATTGAGTTATGATTTGCCCTTATCAGTAAGCTTCGTCAGTTTTGTATACTGGAGGCTGAGGCTCATTTCTGTCCTTTCATTACCCCGTCATCAGAAGAGTAGCGACTCGGCCTTGTGTGATGTGAGCAGGTACCTCCCAGGGAGAAAGGCAGAGAAACTCACGGGGACTATTGCGGATCATGGAACTGGTGTTGGATTATATTTTCATTCTGTTTATTAAGGCAGTTCTGAAAACTCTTTATCACAGAAACAGTGATGTATCCTTTACTAGTCAGTTCAAAGATTTTACATCATTTTATGCAGTTGAATTCCAGAAGAGAAACTGTTCTCTTAACTGTCGTCAACCTTTATTGGCTATGAGCTTTTGACAGTGACCCTTCTGTTCAGGTTTAGTCCAGTCTCTTGTTTCTTGAGGGAGTAGAACCTGTCGTTCTTCATCTTAACTGTTTTTGACCTGTATCCTTTCTAAGAGAGGGCTCTCTGATACCTGTTCTGAGTGATAAGTGACATTTTCATCTGGTGAAATACTATGAGGATATATTCTGTTGATGGACTTTCTCTCCCCGCAATAATCCCTTAATAGATAATTCCCTAGTGAATGATTATCTTCATCCTTTTTGTCACAAGTGTCTTTGCTTTCTAGCACAAATTACAGCCGTACGCAAATGATTCTCAGATAAAATGATGTTGACAGTATTTCCTTAACGATTTGTGTAAAACCTATGCATAATTTTCATTATTCTAACTTGACATTTTTTCTCTCCATAAATAAAAATAATGCCTGATGTTTAGTTAAAGT EMBV3_09696 TACCGCTGAGGAGCTGCAGTCGCAATCAAGGTACAGCCCAAGCACCTTGGGTGTGTTGGA Variant GeneID:281671|CCNG1:NM_001013364:2_cdna 203^466 1 EMBV3_42791 GeneID:281671 7 GENE CCNG1 NULL cyclin G1 EMBV3_14006 TCCTCAAAGGACACTGACACCTCACAGGAATTGTCACATCCCCCTGTACTCAGGGTCGGA Gene BVV0101_020733 + 1 EMBV3_15848 GK000030.2:91303289-91347204 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247553 TCONS_00247550 1 XLOC_151357 Coding TCONS_00247553 XLOC_151357 Coding Coding LOC100847398 X:91319867-91377142 = TSS185355 595 1 TCONS_00247553_1 72 3 0.989663721758564 5.52249676121438e-10 3.96319671295795e-10 0 2.68619498110643e-10 1.52466235998519e-10 0 1.95873307788476e-05 2.34962101652907e-10 0 0.000206768532345174 1.72692232368462e-05 0.000150236598129433 0.000267639036833918 0.000145348933454807 9.0702779851954e-05 0.00230081271153684 3.34500867369182e-10 0.00257139314281383 0.000237021989620272 2.71183330983839e-10 5.45037474352523e-11 0.00723301047510282 0.00300474298945047 0.00198305501212179 2.17722199295864e-10 3.79334325266735e-10 1.1047162413116e-10 0.000145794347258681 1.90868635549608e-05 0.000798259707490662 XM_002700089.2 ZNF81 PREDICTED: Bos taurus zinc finger protein 81 (ZNF81), mRNA. 0.0 737 96.67 0.751260504201681 NM_007130.2 ZNF41 Homo sapiens zinc finger protein 41 (ZNF41), transcript variant 1, 8e-44 181 74.67 0.500840336134454 TCONS_00247553_1 sp|P51508|ZNF81_HUMAN ZNF81_HUMAN Zinc finger protein 81; 2e-13 66.2 58.62 0.791666666666667 1 noncoding 1 1 1 1 0.0223558641461208 0.842435829086358 0.0233432552539335 0.719922422776609 GCAGTTTTCTGCCGAGGTTTAATAGTTGTTGTGAAGAGGATCCCGTTGCTCTTTGCCGGAGCGGTGTGAAGGTTTTTTGGAATCTCTGCTTAGCCCTTGGGACAGACCCTGTGGTGAAGGCTGCAGGATCTTCCATATCAAGCATCAGCAGCTGTGGTTAAGTCCACAGGTGCCCACCTGACCTCGGGTTCCTGGGAAGAGCAGAGTTGTCAGCAAGAGACCTGTGGGTAAAGCCCAGCAGAAAGATGCCAGGCAATCGGAGTGCTGCTGGGCCGTCTCCGACCCTGAGTACAGGGGGATGTGACAATTCCTGTGAGGTGTCAGTGTCCTTTGAGGACATGACCGTGGACTTCAGAAGAGAGGAGTGGCAGCACCTGGACTCTGCTCAGAGGTTCCTGTACCAGGACATGACGCTGAAAACTACAGCCACCTCCTCTCACTGGGTATGCACAGCTACCCTGTGACTCTATGAGTGTTGTAGCCACGCGTTCTGGGAAACAAACTCACTCAGAAGGACAACGCAGATAGTGGAGTGCATTTTATGACACCGGCAGGCCCAAGGCAGAGTCTCCGTCTTAGCCAAGGACCCCGACCA EMBV3_10684 CCCCTACTGAGTGAATGAGAAAAGGATGAAAGGAAGGGCTTTATAGTCTTCGTACCTCAC Gene BVT0101_028560 + 0 NULL GK000015.2:42386361-42435879 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00064651 1 XLOC_039375 NonCoding TCONS_00064651 XLOC_039375 NonCoding NonCoding - 15:42433472-42433797 - TSS48394 325 1 0 4.18637310996965e-05 0 0 0 0 0 0 7.27965096433527e-05 0 0 0 0 1.76571298756822e-05 0 0 0 0 0 0.00035302962795127 0.000110637465886303 0 0 0 0 0 0 0 0 1.49372262811055e-05 0 0 noncoding 0 0 0 0 -0.227967640963117 0.0821919350099828 -0.038844018407643 0.451349075519592 TGGAAAATACAGTCTTCAACGTGCTTTAAAAAAACAAACCAGGAGCTGGCAATTAAAATCCTCCAGACGCCCGCGCTCCGCAAACACTACTTCTGAAGAATTCTGGTATATTCTGGGTCTTCCTTGACTGTTGGACGGACATTCCTTTGGGAAAAGCTTTCTCCACAGTGAGGTACGAAGACTATAAAGCCCTTCCTTTCATCCTTTTCTCATTCACTCAGTAGGGGATGGAATAAATAGGGAGCTGAATAAAGCTTTCTTAACGCACTGAGTTGCACCGTCCAGTCTCCTGAACCCTACACTCAGGGCTTCCCTACCCAAAGGC TCONS_00059099 TCONS_00059100 . 5' 564 TCONS_00059099 TCONS_00059100 . 5' 564 EMBV3_08235 CCCTGGGAGCGAGTGCTATTCATATGTCTTCCGCCAATGTGAAGGTCCTGCTAGTGTTTA Gene GeneID:100336624|LOC100336624:XM_002685185:59_cdna Constitutive 0 NULL GeneID:100336624 1 GENE LOC100336624 NULL collagen type VI alpha 4-like EMBV3_39252 CTGCATGACGGAAAAGGTATACACTGTATACACATAATCCTGTCATTTGTCTTCGGCAGC Gene BVT0102_090395 - 0 NULL GK000001.2:5915578-6157624 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002910 TCONS_00002906 TCONS_00002909 TCONS_00002908 TCONS_00002905 TCONS_00002907 TCONS_00002911 TCONS_00002904 1 XLOC_000733 Coding TCONS_00002904 XLOC_000733 Coding Coding BACH1 1:6154068-6172620 j TSS1492 5611 1 TCONS_00002904_6 532 0.0254856531812511 4 0.697752142741631 5.7721830437166e-30 5.03888407081735e-09 5.18023633079012e-30 1.08311053155594e-36 1.4009045983629e-19 4.79276037720071e-37 6.90252325442335e-06 1.21654146083844e-09 5.55126053995041e-69 0.000108874185986473 0.000133777667549883 2.32708590179466e-05 4.66820903144653e-14 3.12082918135766e-05 0.000175677411164041 0.00119580396522105 0.00113930186192686 0.000625400642077323 7.02302277584082e-06 9.42872293017055e-10 3.29926058397948e-08 0.000358080361963918 0.000130617821497189 3.75687459686506e-32 0.000459804284939413 2.06756730873223e-11 8.19087052776528e-21 1.02829831131167e-16 4.86120950954904e-05 0.000171689118416663 XM_609842.6 BACH1 PREDICTED: Bos taurus BTB and CNC homology 1, basic leucine zipper transcription factor 1 (BACH1), mRNA. 0.0 9930 100.00 0.981108536802709 XM_005261012.1 BACH1 PREDICTED: Homo sapiens BTB and CNC homology 1, basic leucine zipper transcription factor 1 (BACH1), transcript variant X1, mRNA. 0.0 2030 80.33 0.394760292283016 TCONS_00002904_6 sp|O14867|BACH1_HUMAN BACH1_HUMAN Transcription regulator protein BACH1; 0.0 829 81.82 0.99812030075188 3 coding 0 0 0 0 -0.0229090027537272 0.860400023236824 0.0399000157995673 0.451966142595471 CAAGGCACTCTCAAGAGTCTTCTCCAGCACACATTAGAAGTTGTTAAAAGGAATTTGGACAAAGTGACAGTTAAAGGATTTGAACCTTTAATTCAGTTTGCCTACACTGCTAAACTGATACTCAGTAAGGACAATGTGGATGAGGTGTACAAGTGTGTGGAATTTTTAGGTGTACCTGATATTGAGGAATCCTGCTTTCAGTTTCTCAAATACAAGTTTCTGGACTCCACTGCAGACCAGCAGGAATGCCCCAGAAAAAAATGCTTCTCCTCGCCTTGCCAGAAACCAGATTTTAAGTTTTCTCTTTTGGACCAGAAGGATTTAGAAATTGATGAGGTGGAGGAATTTCTGGACAACAAAAATGTCCAAACCCCTCACTGTAAACTGCGTAGGTATCAAGGCAGTGCAAAAGCGACTCCTCCTCTGCAGGACAGTGCCAGCCAAACATGTGAATCCATGTGCTTAGAAAAGGATGCTGCCCTGGCTCTGCCGTCTTTATGCCCCAAATACCGAAAATTCCAGAAAGCGTTTGGAACTGACAGAGTCCGAACTGTGGAGTCCAGCGTCAAAGACATTCAGGCTGCTTCTGTTCAGCCTCACGAGCCGTCGGAAAATGAGTGTCTAGGAGGAATCCAGGACTGTGCAGACTTGCAGGTGATTTTAAAATGTGAAGAAAGAAAGTCAGCGATGGAACATGAAGAAGCCAAGAAGAAAGATCTCGCTTCCCAGGGCTCATCTGGAAAAACAGAAACAACTCCCTGCCCCCCCAATTCTGCAGACCCCCACAGGTTCTACTCTCTGTCTGTCTTACACACGTACGACCAGTACGGTGACTTGAATTTTGCTGGCACGCAGAACACGACAGTGTTAACGGAAAAGCCTTCGTCGGGTTCCGATGTGCGAGAAGAGAAGGCTTTCGGTGAGAGTCCAGATGTGAAATCAGACTCCGGCCCCAGGAAGGAGAGTGGCCTTGCTGCAAGTGATCTGAGCAGCGTGGAGCGAGAGGTGGCAGAGCACCTTGCAAAGGGCTTCTGGAGTGACGTCTGCAACACGGACGCTCCCTGCCAAATGCAGTTGTCACCTGTCGTGGCCAAAGACGGCCCAGAGCAGAACTACCCCCAGAAGCGGTCTGAGTGTCCCTGGTTAGGCATCAGGATCAGCGAGAGCCCTGAACCGGGCCAGAGGACTTTCACGACCTTGAGTTCTGTCAGTTGCCCTTTTATAAGCACTCTGAGTCCTGAGGGCTGTTCCAGCAGCCTGGAAATCGGAACTGATGACTATGCTTCAGAGCCCCAGCAGGAGCCTTGTCCCTACGCTTGTGTGATCAGCTTGGGAGACGACTCGGAGACGGATACCGAAGGGGACAGTGAGCCCTGTTCAGCCAGAGAACAAGAGTGTGAGGTAAAATTGCCATTTAATGCACAACGAATAATTTCACTCTCTCGAAATGATTTTCAATCTTTGTTGAAAATGCACAAACTGACTCCAGAACAGCTGGATTGCATCCATGATATTCGGAGAAGAAGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAGAGGAAGCTTGACTGTATACAGAATCTTGAATCAGAAATTGAGAAGCTGCAAAACGAAAAGGAGAGCTTGTTGAAGGAGAGGGATCACATTTTGTCCACGTTGGGCGAGACCAAGCAGAACCTGACCGGGCTCTGCCAGCAAGTCTGTAAAGAAGCGGCTCTGAGTCAAGAACAGATACAGATCCTTGCCAAGTACTCAGCCTCCGACTGCCCGCTCTCCCTGTTAATTTCCGAGAAAGGCAAGAGCACTCCTGATAGTGAGCTCGCGTTACCCTCGATCCTGAGTCTGTCTGAAAGGCCTGCGGCTGGACTGCCTGCCGGGGAGCCCAGCCTATGTTACCCCAGCACCAAGGGCGGCGAGGCGGGCGGTGTGCGGGGCCAGGAGTCCCAGACGGCCACCAGCACCCTCTCAGAGACGAGGGAGCCCTGCCGCCAGAGCGGGGGCATCTCAGACTTCTGTCAACAGATGACCGACAAGTGTACTACTGATGAGTAAACGCACCTCCGGCTATTTCCTACTGACATCTTGACATTGTCTTAAAAGCCTGATATGGCCACCTGTCTCTTGACAGTATGGTTTGTCTTCCCTCGTACTTTGCTGTTAAGGGAATTCCTTTGATATCAGCCTTGACTTTTCCTTCATTTCCACAGGAGGGGCAGAAATGATCTGCTACCTGGATGCTGAAAACTCCCACATGGAAATGCAGTAAGGCTTTGAAAGAAAGAAAGAAAGTGAAGTCGCTCAGTCATGTCTGACTTTTTGTGACCCCGTGGACTGTAGCATATACCAGGCTCCTCTGTCCATGGGATTTTCCAGCAAGGGTACTGAAAACTGCTCAGTTTTAAAGAATAACAGCTATTAGTAATGATTCTTCCCAGTGTTCAAAGTAAACAAGAAAGTGAAAAACTGTAGCGAATCAGACAACAGTTAAACAGGTTGAAACCTCTGCAGACACTTCCTGCTCTAAAGAAGTAGCCTGCAAAAGATTAATCATCCGGCCTTCTTACAACATACTGGTTTAAAAGAAAATGTTCTTCCAAGTAATGCTGACAGAGTTCCATGCTACTGAAAAGTGAGGTGTCACCACCTCGGGCACAGTGCTGTAGGCCTGAAGTGGGAACACATAGAGACCATCTTGCCTGAACCCTTGCGTGTTGCTCTTTCAGCTCTCGCTGAAAGTGGAGACTGGTTGGCCTGTAGCTGTGATTCTCGGCTACGTTGGAAACAGTTAGGAACCTCGGGCAGGAGGCTGGCCTCTGGCAGAGGCTCCTGATCCTCCTCAGTGTCGACTTTAAGAGTCGTGGCTGCATCAGCAGTAGATAAGTGTCATTTCCCTCTTTTCCTCTTCATCTCTTCTACATCTGGGTCCAGCATGATCTTTCTGTTTGCTCACATTCTCGTCCTTTTGAAGGAGAAATAAAACTCAGGACACAGTGGCGTGAGCTCCTGTGATGGCAGCCTTGTCTTAGCCTCCCTGGAATCCTGGAGTGCTCACCCGGGACAAGGCTGGGGGCCTGCCCACCAGAGGCCACTCATACAAGGGAACCCGCTGTCGCAGGGGAAGATGGCCTGCATTTATCAGGAGTGGCAGTTCATTTCCCATCCTGTCTCTGAAGGTCTGTGGTTTCTTTGTAAAAAGCATTACGATAGATCAAAATGTGTCCACAACAACCATGTAGGTTTGTGAGATAGGCTAAAAACATAATTTTGTACCATTGTGTGAATTTGGAAGCCAGATTTAGTCTTGCTCTCCTCCCCAAATCTAGCACGTAAGGGCACACCCATCATTTTGGACTTGGGCATTTTAAAATCAGTCTTTGTGTTTATTCAATCCTGTTTTAAGATAGTTTTCTAATAATCTGAACCCTTATCCCATGCCATTATGCAATGGTTCTTAGCCATTCTGCTGTTATAGAAAGCTGTGGACCTGTCAGTGATGAAAGCAACATTGAATATTTGCATTCAGAGAAACGTTTGCAGAATCCAGTTTGAAAGGGTACAGAAAGTAATTTTTAGAGTTTGGATTGGAAAGTACTTCATTTCACTGAGGTTAGACACCTGACTTGTGTAGAGTGCATCTTGAGTCTGGCAGAGGGCTTGTGTAGTTAACGTGTAGGAATGGGTCTGAAGCCAGTAGGCCTGTGAGGCGATGTGGGGACCAGGCTTCCCATTTCAGAGTAATTCGTCTAATGTTACCCTTTTTCATGGGGGCTGGTGTTGCGGGAGCTGTTGCCACTATCTTTTCAGTGGTTTGTATGTTATTTCTATTATCAGCTTAGCTGTTGTAGGAAAAAACTAGTTGGACTTGTTTATTTTCTAGAGGCTTTTATAAGTACACCTAAGAATTTGTCAGGGAGAATATAATTCTATGATAACGAATCCCATACTACAAAACAGTGATCAATGGTGTACGCGTGTGTGTGTGTGTGTATTCTTCCATCTAGCTATTTCTTTGATACTTGTAATTTTAAATTCAAAATATGAAATAATATAAAACCTTTTCTGGTTTACAGTGTGTAAAATCTTACCCAAGCCGACGGACTCCTTCATTTCCTACCTCAGTGTGCACTCGGCTATTTTTCGCACCAGTCTGTGTATGTGCAAATGTCAGTCTCGTACTTTAATTGCTACTGTAAATAACTGCTTTGAAAGATTACTTCCTATTTTATGATGAAACCTAGCTGTCTCCAGAGTTTAAATACAGTTTTTAAGGCACTTGGATTAAATTTCTCGCTACATATAAACAGTTTAGCATTAAGGTTTATTTTAATGATATTCTAATTATTGGCCAAGTGTATTATTTCATAAAATAGAGCATTACTTTTAATAACCAGCATGTAATACAAGTAACTACACTACCTCATACCTACATGATTTTCAAGTTGTAATCCAGAGGAACAGAGAGATAAAAATTTTTTTATCTTTGTCTTTTGGCCATAAAGTGGGGAAGTTTTTTATATATTGCATAGCATTACACATTTATGCCTATTTTAACATTAACTTCTAAAGACGTTTTTTCTAAGAAAATTTGTTTTAAATTGATTTTTTTTTGATGCTGCCAAAGACAAATGACAGGATTATGTGTATACAGTGTATATCTTTTCCTTCATGCAGAACTTTGCAAAGGTGATTTTCAGTTTGTATATGGTGTATTTACACGATTATGGTTCCTTATTTTATGAGTTAGCCTTCTCACTGCTTGATGATTTATAAAAGCTGTTAGGTCTAACTCAGTAAAATAACCATACCTTAAAGTGTTTCTCATTATTTGAATCCTGCAGCTGTAGCAAATAATTTGTTAAGTTGCTATATTCAGAACAAACATGGATATAAATCTAAGTACTACATCTGTACATCTTATAATTTACTATAGCTTAATGCTTAACTAATTTAAAATAAGGAATCAAATATATTTGACACAGTAGACGATACAGGTTGCATGTGGACACTCAGCCACATTAACAACTTGGAGAAAAAAAATAAAAAAATGGCAATGTTATAATGAATTCTCAGGTGAACTTTTTTTTCAGTTATGAAACATCTATTTTGAATTTGTAAATATTTTAACTGTTTTATTAAAGCATGTAATAAACTATTCTTTGAAACCTGTTGGGCAGAATGAAAATTTAAAGCCATAATGGCAAAAGATGGCATACTGATTGTAAAATAAACAGAAATAATAACAGCTATTGATTTTTTTTGTATCTTTCATAATATAATTTTCTAACAATGCAATAAAACCACTAAATTTATATATCAATATCCTATCAAGATCATGTTTCATTAAAGATGAACTTTCATAGTATTTAATTTACATTTTCTTCCTATTGTGCTTACCCAAATGTAGCAAAACTAGGAATGGTAAATGTTGGTAATAAAATGACAGTTCAATAAAAGTCTCGAAAACTGCTTCTGATCGACTAGATTTGTACACTCCATTTCCATTTTCTCACCTCTCATACGAATTTACTAATTTTGGTCTTTTGGTCAATAAACAGTATGGCTCTGGCATCTGTTTGAAGGGGTCTTGTTCATTAGTTGATTATCACGC EMBV3_30765 ATTGGAGGCTTTTCCCCTTAAGATTGGGAATAAGCCAAGGATATTCATTCTCACCATTTC Gene BVT0102_264963 + 0 NULL GK000030.2:23059622-23075814 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249734 1 XLOC_152677 NonCoding TCONS_00249734 XLOC_152677 NonCoding NonCoding - X:23069387-23073574 - TSS186955 4187 3 TCONS_00249734_5 92 0.49916407929305 1 0 0.00034119932543786 0.000206392455919496 0.000181234185073786 0.000130899028693788 0.00027828398457733 0.000140963371090279 8.35687973257656e-05 5.43865578203548e-05 0.000264135494818098 0 5.46736142122342e-07 4.26997642969749e-06 4.11171478187919e-06 7.75198701137303e-05 1.1717688198349e-06 0 0 0 0.000208944747619006 0.000120229315355953 7.17786894508242e-05 0 0 4.00397132937594e-06 0.000230010728674804 0.000194520228887365 0.000113776302085074 0 0 7.17966490012188e-06 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 1e-115 423 94.20 0.0652018151421065 0 noncoding AGTGCTGTTGACAGTTGCATATGTGGTCAATTTTCATTTCCTAATCCATTAACTGACACATAATACAATCTATTTTTGGAGGCCACATTATACTATTTTGTCCTATGCAATGTAATATGAGGATAGATCTCAATCAGGACCACATGATATTATAGCATTCAACCAAAATCTACCAATAAGTATTAATTTTTGTTAATTCGATCTGTCATAAATACATGTTACTTGAAAGAAATGTATATTTTTAAAACATCTAAAGTCAGAACTTGCTAGAGAACAGGGACACATGGAACCATGTCACCTTATCTAGTAGCATGTCACACTAAGAGAGTAATGCATGCTTTAAATGCAGATGATATACCAATCCATTACATGTAACTCTCCCAATGACACTGCAAGAAAGAAAAGGATAGTGAAAAGTGTACTGATGGTAGAAAGTAGAAAATACAAATGGAAAGAATAGTGTGATTTTTTCCCCAAATAAAGTGTACGTACATCAACAAATGTATGGTAAGCCCTTTATTGCCTGAAAAATAAGCACAGGCTTGAAGTAGATTTAAGTTGTTTTGTCATGTACTTTTCAAAGAATGGTAATATGCCCTAAATCTACTGTGATTAGTTACAGTAATGGAATCATTTCAAATTAAAACTAATCAAATATGTAATTGTACATGTCCTGCATTACAGTTAGCTAAAATTGAATGTAATTAACTTTGTCCTGAATTAAGTTTGAGGACATCTGGCTCTATATTTAAATGATGATGATAAAAGTTATGGAAAATCTACTGAGTGTTCCTAATGTTGAATAGAAATGCTAATATTATATGGAAGTTAGATGAATGCACTTGGTGTTTTCAATTTTGAATTTTGGAGACCTGAGTACAAGAGAAGCCATTATTTTCTAGTATATACACTGCACTGTTATTTCATAGTTTTATTGGCTTTTAAAATATGCTTCGTTAAAAATGATTTATATATGTTAATTTACACAGTTCTTTGAGCATGTATTTTAAGTAATTCATGTGTTTCTTTTCTCTCTGTCTCTCATTACTGACTTAAATAAGCACAAAGCAGTTGGCAGAAAGATGGTCTTATTTATTTTCGAACTTAAGTCTTTAATGTGTAAGATGGAATCAGTTAATTTGGGGGGAAAATATGATTCATTACAACTATTTGGCTTTTGAAAGTGTGCAAAATGTCACTATCTCGGATTTTACCTTATTTCAATACATACACATTTTTAAAGGGTAAAGTGCTCAATTCAGCATGTGCAATGTTTCTTTGTCTGATACTGTTCCTTTATGGTTAGCACTGTATCTGTCCTGTATAATACAAGAAAGAAATGGTTAACTGCTCACAGGCATGAATGCTTAGAAGCTTTATGTTTCTAGCTTTTATGTTTAGGTCTATGATGCCCACTCAAATTAATTTTTGTGTGTGGAGTGAGGTGTAGGGATGGAGCTTCATTTTTTCATGTGGATACCCTGCACCATTTGCTAAAACAACCTTCCTTTCCCCATTCAGCTGACACTTTGATTAAACACTGCATGTGTGCTCAGTTACTCAGTTGTGTCCAACTCTTTTGTGACCTCATGGACTGGAGCCCGCCAGGCTCCTCTGTCCATGGAATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATACCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCAAACCTCTGTTTCCTGCATTGGCAGGCAGATTCTTTACCGCTGCATCACGTGGGAAGCCCATTAACCAGTTATATATTAATATATGTGGGTCTATTTCTCAATTCCATTTTTCAATACGTAAGCCAATACCCACTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAATCCATGGGGTCGCTAGGAGTCAGACATGACTGAGTGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACAGGGGAGCCTGGTGGGCTGCCATCCATGGGGTCACACAGAGTTAGACACGACTGAAGTGACAGCAGCAGCAGCAGCAAGCCAATACCCACTGTATTCACTACTGTAGCCTTTTAGTAGGTTTTGAAATCAGATATGTAAATCCTCAAGATTTTTGAGATTCTTCTGTTCTAGGTTTTTTTTTTTTTTTTTGCCATCCATTTTATAATAAACCTGTCTTATTTTTTATTCAAAAGGGCTTGCTAAAATTTTGATTGAATTATCTGTCAATTTGGGGACAATGGATTTCTTAACAATAAAATTTCCAATCTTCCAACATGGTATATCTCTCCTTCCAGTAGGTCATCTTAAATATATCCCAGCAATTATCTGTTCATCTGAATATAGAAGCCTTGGACATTTGTTAGATTTATTCCTGTTTATTTTATGCTTTATATAATCACTAATGGTATTTTTATTTCTTTTTTTCAATTCTTTGTTACTAGGATACAGAATTACAATTTACTTTTGTATAATGGTTTTGTATACCATTGCCTTATAGAATTCACTTATTACTTCTAGTAGAGTCATTTTGTGTATAGATTTCCAATGGTTTTGGACATAACAAGATCTGCTAAACATGAGAACATTGTCTCTTTTCTTTTGTTTCTTATCTCTTTAGCTTGAATTATGGCACCGACTAACACTCCCAGTATACGGTTAAATAGAAATGGTGAGAATGAATATCCTTGGCTTATTCCCAATCTTAAGGGGAAAAGCTTCCAATATTTTAGCATTAAGTATGAGGTTAACTGTGGTTTTTTACAAGCACACATTTTCCCCTTTATCCCTATCATAGTCAGAGTTGTTATCATGAATGTGTATGGACTTTTGTCAAGTGGTTTTCTGTATCTACTGAAATGATTACATAATTTCCCCCTTTATTATGTTAATATGGCAAATTATACTGACTTTTTAAGTGTGTAATACAAGTACTTAAACCTATACAATTCCCTACATTTCCCTCCCTCTTGAGCTGTATCCCTGAATTTTGATATGTCACATTTCATTTTCATTCATAATTACTGTGGTGATTTCCTCTTTGTCCCATGTGTTGTTTACATGTGTATTATTTAATATCCAAATATTTAGGGATTATCTATTTCTAGCATAATATCTTTTGAGACTGTATGATTCTGATCTTCTGAAATTTATTGAGATTTCTTTCATGATCTAATGTATGATCTATCTTGGTGAATGTTCCATGTATACTTAAAAATAATAGTATATTCTACAGTTGTTGGGTATAGATTTTGAATAAATGCCAATTGGGTCAGGTTGTTGGTCTAGCAACTTCTTCTGATTACTAATTATCTATATAATTCAGCAATTCAATAATTATCAAAAAACCTTTGAAAGGTGGCCCAGATTGAGAGAACCAAAAACAAACAAAAAAACAAGAAGAGATTCCATTTTGGGGATTCCCATGTGACCCAATATTTATAGTGAATCCTATCACACTTAGGTTTTGTTTCACGCCATAAATGAAATTTGGAATCAAATTAGTTACTCCTGGCCTGTTAGATTCATTTAAACACAAGATAATATCACCTAGAATTCAAATACAAGTCCAAAACTAGGAATGCAAAGAAATATGTACATATAATAATAATCTTGTTCACAAACAAGTCTGGGTTTTTTGTGCTGCCTTTGTATAAATAGCTGAGTATCAGGTAAAAATGTTATAAGAATATTGGTTTGTATACAGAAATTTCAAGTGCTAATGGTTGTTAACCAATGGTTTTTAAATATTAACTAATGGTTAATAGAAAGGAACATTCTCCTTGCTTCATAATATCTTCACACATTAACTCGGGCACAAAACAGAGTGTGTTTGTGTATGTGTGTTCATGAATACACAAGTGCAGTAGAAACCTACCATAAGGAAAGAATATGCTCTTAGAACTGAGTAAAAACATACTGGTAAAGCATTCTTGGATAGTAAGGCTGGATCCTTAAAAGTATATCATCAATATTTAGTTCTGAAGGATCTCTTACAAGGCAGCACTATATATGAACTTTCCTTTCAAACCTATCAATTTTGTAGGGAAAAGTTCGACATGTTTAAAACATCTCTATTCATTAATTTAAAACTATTAAAAGAAAATTATTAATAAGTCAAC TCONS_00246569 TCONS_00246570 TCONS_00246571 . 3' 1132 TCONS_00246569 TCONS_00246570 TCONS_00246571 . 3' 5318 EMBV3_12725 CCTCCTCTTTGAAGGCTCAGTGCTCTCATTTCTGTCTTTGTGTTCTTCCAATGACTGAAC Gene GeneID:525169|WDR11:NM_001101122:20_cdna Constitutive 1 NULL GeneID:525169 26 GENE WDR11 BRWD2 PHIP WD repeat domain 11 EMBV3_03415 CAGCCTGCCCTGTCTCACGTTGATTGGCTCTCCTAATTTTGGGTACAGGTCGGTTCACCG Gene GeneID:535126|PGS1:NM_001046395:431_cdna UTR3_Alt 2 NULL GeneID:535126 19 GENE PGS1 MGC129082 phosphatidylglycerophosphate synthase 1 EMBV3_27564 GGTGACAAGCCCTCCAACGGGGATTTTACTAATGAGCTTGTTAAAGAGGTGCCAAAGAAC Gene GeneID:520954|SGMS2:XM_002688085:132_cdna Constitutive 0 NULL GeneID:520954 6 GENE SGMS2 NULL sphingomyelin synthase 2 EMBV3_32816 CACAGATAGGGCGCATCCTTCACTCCTATTCTGAGTATAACCAGAGACCTGCGTGCTCCT Gene BVT0102_103445 + 0 NULL GK000028.2:28157121-28254031 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16036 GCCACAAACCAGGTGGCAGCGAATACCTGAGGCAAATTTATCACATCATGCGGCTCAATG Gene GeneID:617013|LOC617013:XM_002689393:8_cdna Constitutive 0 NULL GeneID:617013 7 GENE LOC617013 NULL hypothetical protein LOC617013 EMBV3_30227 GCCTGGGACTTTGTGGACGAGGTTTCCTGGAATGGGGAATGAAGAGGGTCTGTGTTTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29373 ACACCGACATGGAACAGGGACTCACTGGGGGCATACTTCTCCGCCTTCCCACCACCCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05027 ATGGCCAGGACCCCGTTTACTCCCACAGGACTATTCAAAGGAAGGGCAGTCTTTGGCTTT Gene BVV0102_243785 - 1 EMBV3_16949 GK000005.2:70178440-70237678 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20616 CGCGCCCTCTGCAACCATGTCTGACAAACCCGATATGGCTGAGATTGAGAAGTTCGATAA Gene GeneID:100297716|LOC100297716:XM_002683943:2_cdna Constitutive 0 NULL GeneID:100297716 Un GENE LOC100297716 NULL similar to thymosin, beta 4 EMBV3_26433 AGGCTGCAGCTCTATGTGTTCGTGATGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAA Gene GeneID:100337318|LOC100337318:XM_002696987:20_cdna Constitutive 0 NULL GeneID:100337318 22 GENE LOC100337318 NULL MGC84343 protein-like EMBV3_16977 CCCCTCATCCCAGTTCTACTCAATGTACTCCATAATGTTATTCCTCCTGCCCTCAATCCC Gene GeneID:787843|LOC787843:XM_002693246:517_cdna Constitutive 0 NULL GeneID:787843 15 GENE LOC787843 NULL similar to cOR56B2 olfactory receptor family 56 subfamily B-like EMBV3_26251 TTGAGTAAGTTCCGGCTCTCCTACTACCCTCACTGCCTGGCATCCTTTACGGAGTTGCTT Gene GeneID:538212|GNMT:XM_002697244:436_cdna Constitutive 1 NULL GeneID:538212 23 GENE GNMT NULL glycine N-methyltransferase EMBV3_30231 GCATACCTATATGCGGTGAGCATTGGCTAATTTCAGGAAAGCAGGTTGTGTCGGCGCTTC Gene BVV0101_025089 - 1 EMBV3_41367 GK000021.2:68601205-68639657 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12888 GCACGCGGCCACTGTCGGTTTCCTCCAGATGAGGGTATGCACAGGATGACAGAATTTCAT Gene BVV0101_041075 + 0 NULL GK000001.2:98128107-98177772 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004658 TCONS_00004659 1 XLOC_001081 Coding TCONS_00004658 XLOC_001081 Coding Coding GPR160 1:98062497-98141687 j TSS2321 7905 6 TCONS_00004658_6 83 0.0282099936748893 4 0.900226041495662 0.000229564638871094 4.21564221670404e-06 6.86626919088465e-12 3.25622070784498e-06 4.01583211413405e-05 3.65346402447686e-05 1.36233340821881e-05 8.79679528749027e-05 9.88630886972463e-05 7.04938434903709e-06 2.36234964000136e-06 1.00294777872213e-121 4.72987595454425e-05 4.958884492521e-06 0.000202477866615726 5.16171227305054e-61 6.70665402800502e-36 3.95521586308236e-202 0.000100592754346764 0.000112528454144972 3.13676981035224e-05 5.63165559782424e-59 2.36407469218271e-271 7.39633464755648e-47 4.40873708846584e-05 4.96304197845705e-06 7.54698354623906e-05 7.66619836185444e-87 1.19558145452404e-37 1.64556037381828e-59 XM_005201688.1 PHC3 PREDICTED: Bos taurus polyhomeotic homolog 3 (Drosophila) (PHC3), 0.0 1.280e+04 100.00 0.897406704617331 NM_024947.3 PHC3 Homo sapiens polyhomeotic homolog 3 (Drosophila) (PHC3), mRNA. 0.0 1626 73.56 0.336875395319418 0 coding TATGCAATTTGCAGTTTTATTTTAAAATGTGAATTCACAGGCGTTTGTTTACATGAAATTCTGTCACCCTGTGCATACCCTCATCTGGAGGAAACCGACAGTGGCCGCGTGCCCACCCTGCTGAGGACATGGGAGCTCCTTGGGCAGGGGTAGGGGGATCTGAAGGCCCGGCACTCAAAAGGGGGTCTCATCTTCCACCCTACACCCTTGGGGCGTCCCCTGTGCCAGCGCCGACCCCAGCCCCTCTCCCGCGGGTCGAGGTGGCTGGCCTCGCACGCCTCTCGCCGCCCCGCCCGCAGGCGGCGCTCTCTGGCCGGTCTCCCGCCGGGGTCGCGACGGGGCGTGCGCGCTCGAAGGGTGGCGTCCGCACTTCCTGGTAGCGGGCGCGGAGCGGCCGCAGGGTTATTGCAGGGTACAGCGGTCGGTGCTCGCTGTCCCCACCTGTCCCTGGTCACCTGGGGCCGGGCGCGGCAGTTGTCCAGACGGCGACGTCGTCGCGGGTCTGGTCCGGCGCCAGCGCCTCGGACGTAGAGCGGGAGCCGGGAGTCGCCGCGCATCAGCTTATTTGCATGGCGTTTTGGTGTGCCAGGAACAAAAAATAAGATAATTAAAGGCAGTGAAACTGAAGTAAAATAGGAAGATCATCAGCCAAGAAGGGCCTATTGGAGGAAGCAGAGGATGGAAAATCCAGTGAAGCACTGTTTGATTGTAGCAGCAGGCCTTTGAAATTTAACTCAAAAAATGAGTGCTCTTAATTCAGAGAACTGCTCTTTTCAGTACCAACTGCATCAAACACATCAGCTTCTAGATGCAAAAAGCATGCTTTCAACAAGCAAGAAGACAAAAAGGACTAATTCAACAAAGAGGCTTGAAATGCCCAACACCCATGTCAGCCTCCGTTCTGCACACTGCTGTCTACAACTCCAACCTTCATCACAAGCTCACCCCTTACTTTGAGGATAATTTTGAGAGCTTACTTTGACTTCTTTTTCCTATGGAAAAAAAACATGCTTTTGAAAGAGGTGATTGAGAATCTAGTTAAATGTCTTGGAAATTAAATGTATTAAATTATTACCATCTTTGCACACTCAAACTGGTTTTTTAAAATTTAGAATACACATACAAAAAATATTTATGTAATATTTTAACAGCAAAAATATTTGAAAAACTAGGTAAACTAAAATACTTTAAAAGTTTTAACCAGTACCAGGGAAAAAACCCAGACTATCTGGTTACTTGGATGTTAGTGTTCCTATTTACAAACACTTTATTACAGATTCTATTCTTAACACTTATTTGGACATTTTCCTGCTTTAAAAAGCTGTAACTATGATACAGAAAAGTTTTTTTAATCTTTTTTCATTTTGCATATATATGACACACATATAAAGTTGTGTCAAACAGGAAATTACACCATAACTCAGAATCCTCTGGTGGCAAGGAAATTTCTACCCAATAAATCAATCCTCCCATTCTATGTTTGCTCCCCAAATACTTGTAAATTCAAGCTCCAAGCACAGAACTGTTGATTGTTTACAGGTTCTGCATGTTAAAGGAAACCCTTTTACTATGTAAAAGATGTGTGCTTTCTAAAAAGTAGATATTTGTGATAACTGTAGAATTTTATGTAGTATTTCTTGCTTTAAAAAGAAACACAAAAACTAAACCTGTTCAGCAAGCTCCTTTGAGATTTTTCCGTTTTCAGAAGTTACTGCAGTCAGTACTGGGTGTAAAGCTTTCGTAGTACAAAGTGTATATAGTAAGCCAGCACCAGCTTTCCTTGTAATTGTTCTGTCACACACCCTGCATATCAGCACCTCTGGAATAGACTCAAGTGTCAAAATAATTGAGAAATATGGGCTGTTAAAATAGTTTCAAAATGTAAATCCTAGTATTAAGTACCTTTAATTTTATAACCTAATCAGGTACATGGATTAATATGCAAAATGTGTTATAGGAATTGTGATATGATTCAGTCAGACCCCTTGGATATCATCTAGCTTAATCCTTTACCCAATGCATAAATCAGCTCCAGGTTTATATTCACTGCATTAAGTAATAATAATTACATGTTTATGCCACAATCAAAACCGAGGGCGAGAGGATTTTGTTATTACTGGTTCCTTCAGTCAGGTATACCAACCACACGCTGCACACTACACAGTAGATGTTCCAATGGTTTGCTAAGTGAATGGATAAGTGAATGGCAGTATTTAGATGTGTTTAGTGATTTAGCAAGCATTTAGAAAAATCTCATTAGCTCATCTGTGTGAATTTTCTACCTTAATCCTAAGGAGAACAAAGACTGTGGGTGTCCCAGGAAATGGATCATAATAAATAAATATTTTTTAGTCAAAGCTCTTAAGTGTGAAACAAACCATTAAAAAAAGAAATTAAGAGAGAAATAAGTAGGAGCAACTTTTGAAAATACCCCACTATGTGGTCTGGAATCATAGTTTATACAGCTTAAAGATGATTTAAACAAAATCAACCTTTTGAGTAGTACAGGCTCTGTACTGAATATTCAGAAGAGGGAACAGGTTATAAGCTTAGTAATGGCCTAAGATATCACACAGCTAATTTAAGAACTAGAAGTAAAACTCCAGTCTCCCAGCCAGTATTTTATCTTCACTTACCATGTTCATTTAATGATTATGTCCACCTATTATTTGCTAAGGAAGTAATTATTTAATACTATCTAAAATTATGGTTTTAACATAAATATTAGAAAAGATTTTAGCAATGAATACACCTGGTTTGCTTGAGGCAAGACTAAAGTTCCTTTTCTAAAATAGGTTGATGTTCATTTCACTACCATTCCTCATCACTCTTATAATCAACTTTTTCACCTCCATCCATTAAAGCTCCACAAAAATCAAGGATTTAACACTGATAATAGTCCCTAAACTATAACTTTTAAGTCAATAAATGACAACTACTATCAATCCTTAAGATTATTGGCGTCAATTTAAATAGGTGGTCTAAGAGGACTTCCTTTTATTACTCATATTTAAAACTGTACCATGTTAGCATAATAAGTGTTTTAAATTTATATAGATTTCTTTTGTCCAAATTAAATTTCATTCATTACTTTTTAAAATATTTTAAAACCCTGGCACAGGTTTTCTTTCATGGATTCATACTGATGCCACCAATAGCACTGACAGCAACTATACTTTTCAGTAGAGAAAAATGTTTTAATGTACTTCTTCCCTAATGTCGGAGGCTGAAATAGTCACCTTTAATAAGTCAAGTTAAATGTTCACAAGCTGTTCAAAGGAAAAAAATGAAACTGTGGAAAGCATTTCCCAAAGCTTCCATGAACACGGCACTTTAAGAGGTGTGTGTCAGAGTAGAATGGGAGAGCTTTTATTAGAGAAGCTGGGCTTCAGATCTGAGGAGGAGGGCAGGTCTCCCTTTTCACGCAAGTATACTAAAATGCAAGTTCAGAAAGCCACACTTTCTGCTGGGGAATATGATGATGATGATTTGTACTAGTGCTCTACAACTTTCAAAAACAACTATCATAGTAGTATTTTAAAATAGATTAAATAAGCTCTGAAAAATAATAATGTTAAAACTTCTTAAAAATTTAGGAATTTTCCAAAGAAGATAATATAATTTTCAACATTTTTTACTGAAGAAATGGCTTATATTAGTGCTATGAGTAAAACTATATGATACATTTTTTGAACTTCTAACAAAAAAGGAATTATCTTCCTAAAGAATCTTTTTAAAGTGTACAGCTTATAGGTTGAAATTAAATTTTAATAAGATTGCATATTTACTTTCCCTAATACTGCATTTGTGCTTATTTAATTGAATCACAACTGTTAGATAAAAATCAAATGCTCTAAATAGATTCGGAAATACCAATTTTGATGAAAGTAGATTAAACAGTTTTTTCAAGAACCACACTGCTGTGCATCAAAGAAAAGAGGTAGGCTTGTAGTTACTGAAATCCACACTAAGAAAACAGAACCCTACAGCTCTAGTCATCCAATTCTTAGACCAAGACACAAACCTAACAAAATACTATCCATGGATATTCTCTCCTCTATATACTTCTGATAACTCATAAAACCTTTGAGTTCTTGACAAATACTCTTCCCAACTATACCAGCTGTTAACCTTTCTCAGAAGTCAAAAATCACCGATTTATGTATCACTGGAACTATTAATGTGCTCCTAAGGGCAGGGTCATTTGACCAGGAGAGTAAAAGAATGACTTTGATTGCAGGTAAATCTTGACATTAAGGGGAAAAAAGCACCCCGTATCCTGTTTACTGCAGTAAATGGAACCCAACCATTACAATTTATTTGAACTACGAATGGCCAAATCTATACACTACCACCTCACTCAGTTAAGTGAATTATCCTCTTGGGTCTGGAATGCTTTTCTTCCTGTTTGTCTCTTCCCCACTTCCCTGTCATCTCCCCTAGAAAACCTTCCCCAGGGCCCAGCAGTAGTGTGCAGGAAACCTCTGAGAGCACACTGTGCAGAGTGGCCAGCTTCCACTGGCAGAGGCTGCTCAAGACATGAGTGAGTGCTAGGTATTAGAAATTCCTGCCCCAGTTAGTTCCTCCCCGAAATTAACCCTACCACAGAGTTGTCTGTAGGGCTTCGCAGGCAAAGAAAGTTATCAGTCTCCTTTGGGCTTGAGGAGGCAAGGGGGAACGAGGCCCTTTCATCCTGTTAGGCAATAGTGTTCCTCAATGCCCGTTGCTCAGAGGCAGCATGAGTTCTTGCCATTCAATGAGGGGGAGGATCTTCAAACCACAAAATATAACCAAGCTGTTCTAGTTGAAAATACATTTTTGAAATGTTCTAACAGTGTGTCCAGCTGGGGATTTCTTCCATGTGATACGGCTGTGAAGACAGCATCTTTCATGCATTTGTACTGGTTTCTTCTTTCCAAAATTCTTTACACACATGTAAACACAGCCTGAAACCACACACAATCTATGCACTGCCTCACTACCACACTTTATGCCATGGTGGTACCAAAACCTTGCAAATGCAAACAATGGGTCTTCGTAATATTTAGCTGAACAAGTCAGGTGACATGAGGCACTAGGACAGATTTCAATCCAAGACTGGTATCTGAATACACGTCGGACTATAACATCATGCTGCATATGGGGAAATTAGCTATGTAAAAAATTTAAGTGGGCTACCTAAAAAATTTTTTTTGTTTAAATCTATTTAAAACTAGGTAAAATTAGTATTAACTTCAAAAGTACAGAGATGTGTTCAGTGTTAAGGTGGATAAACTAAACGTGGCAGGTCTCCTGTCTGCTTCTCCTGTCCTCAAGCCCCATCACTGACATCGCTTTCCGCCTACTCCACCTTCTCTGTTCAGAGGGGACAGCCCTTAAACTGCAACTTTAGAAGGGTCTGTTTAGAGAATGCCCCAGCAAATTAAAAGTACCATGATGGGGAAATAACCAGGCCCTTAGAAAGCGACAGGATGTGGCACAGCACTCTCATACTGATCTTATCAAGGCTGCACCGCTGTGTAAGACACATGCCCACATAAGGCTTGAGGAAAACATGCAGCGTGTAAGCAACAATTTTTACAAACCAGCTGTTTACTTTCTTAAGCGCACATGGCTTAACGCAAGTAAAATTTCAGACTTGTAGGGATTTCCTTCAGAAAATGCAAACTTAGGTAGCAAAAGTAAGAAGAACTTCCCATGTCCCCTTTCTGCTTATCATTCCCTCTTAATCAAAATCCTAAACCAGGTAGTAATATGAAGGAAAATGAGAATAACAGCACTCACCCCACCTATTTCATACTAAAACTGTGCTTAGAGCTTAGGAGGGAGGTGGGCATCCAGTGTTATCATCTATATCCATTAAATATATAACTGAAATTTTAGAATCCACATGATTAAATCATCCAGAAAGAAACAGCTGTGTCAATGGTAAAGCTACTACTTAAAAGCCAATGAGCCATTTCTAAAATAAATTGGAAAAAAAGCAAGTGTATTTTTTAAGTATGTTTTAAGTGGGGACAACAGAAGATCTGGACTGTTTTTATTATCGTAAGATTTAGGATTATAAGGTGCTCTCCAATGGAAGCCCCCCTCGTAAGTGTTCTTGGACACCTAGCACGGTGTGAGGAACAGGGGCTCTGGGTAGGCACGTGATGACTGGGATCACCAGAGCAAGTGAACAGGAGAACCTGTAATGCAGGTTATATATCGATAATATAGTCATGGGAGGTGATCATTACTGCTAGAGGAGTCTATCCCCAAAGAATCAATTTTGTGTGAACTGTCCATGGATCGTCTATGACAAAGCTGTACTTCCAAGAGACAGTTTCCTTTGTGCCCTTCAGCCCTCATACAGTGGACCGGCTCCTACTAACGCTTAGCCTTTACTTGTGTCCTGAAATTGCAAGCTGAGGGGAAAGGTCAAACCATATGACAACTCTTGTCATAAAGATTAACTGCTAATAAATGAAAACTGACTGTAGAGTACCTACCTTTCCTTGAAACTTTAATCCAGTAATTAAAAATGTGATATAAAAGAAATATGTGACATACATTACAAGCTATTGTAGGTCTGGAACATGAGCCTTATACTATATTACATATTCTAATCCTACACATAACTATCAGTAAACATCTTTTTTTTTTTTAAAAAAAACATTACTACACAAAAGAATCCCACAAAGCATACATTCAAACAAGAGGCATCTAAAGGTTAAAAAAATTACCCGCTGTATTTTTGTATAAAAATAATCAACATTCTCTAATGTACACAAAGCCAAAAGATAAATATCTGTGATGTCTTTAATGACATCTTTAGTCTTCTAATAGCATAACACAATCTTTCTGAAAAGATCAGTGACAATGACTGAAACCCATGGACTCTTCCTCACTTAACTGAACTTCTGCCAAATATCTGTGTATGTTCCTTCAATTACTAAAACATTTCCATTGTATGGTAAAGAGAAGATGATAAAAGAGTCAAATGTTTTTGATGTCCAGGACTATATATAGCTTACAGGGCTCCCACAACAACTTTTAGTGCCATAACTAACGCAACACTAATTGTTCAATGAAAAGTTTTGCTTTAAAGATTTTTTCCCTAAAACATGTACATACAAAATTAGACTCAATTTATCCAAGAGTGCTTTGCAGGAAGCATACAAGGATTTAGTCAAGGAAAAAGGAATGTGCATTCTAGCTAGATCCACCTTGTTCAACACTAGAAAAATCCGAAGACCAGCCACACAGCCACCACCAACCAGCGCCCTGCCAGCAAAGGCCGAGCCCTGGCTCTTAAGGCGCAATCAGGTTATGCCTTCGTCAGGGCAGAGACACGAAAGATGATTATTATGAATCAGTTCTGAGAGGCAAATTATTGGTATGCTAGTCCTCATTTTATATGCCAACTTAATGGATTCCCCCCCTTTTACTAGAATGCATAAAGCTGGGAACAATATTCCAGCAGAATATTAATGCTATCTGAAATATTTCCATTATACAATGTATTCCTTATTACATCCCATCTTTTTTTTCCCCCCAAAAATATCCCTCTGGGTGAAAAAGCCCAACATTAATCACTCCTTCATTACAGTTTCTCAACCCTGGCACTACGGACATTTTGGACCAATAACTCTCTGCTGTAGAGGGCTGTCCTGTGCATCTGTAGGATATTTAGTGACATCCCTGTCCTCCACATGCCAGATACGAATAGCAACCCTCCCCCCGACAACCCCTAGGCTATGACAACCAAAATGTCCCTTGACATTGTCAGATGTCCCCTGGGGAACAAAACTGACCTCCATTTAGAACCACTGCTCTAAATGAACAAAAACTAAGAGGAAAACGAACTTCCTCAGTCACACCAAATATTTGGTCAAGTTTGGAAGAGAAACCAGATCTAACTTC EMBV3_38047 CATGGCCTTTGAACTGGCCACAGGCGACTATTTATTTGAACCTCATTCGGGGGAGGAGTA Gene GeneID:512631|SRPK1:XM_002697203:86_cdna UTR3_Alt 2 NULL GeneID:512631 23 GENE SRPK1 NULL SFRS protein kinase 1 EMBV3_18194 CACACACTGGTGTATCTCTTTCCATACCTTCTCTCAGGGGAGATGTATATGTATGTGGTG Gene GeneID:100295390|LOC100295390:XM_002689381:23_cdna Constitutive 0 NULL GeneID:100295390 7 GENE LOC100295390 NULL hypothetical protein LOC100295390 EMBV3_31120 CATGAAAACAAAGGTAGTTGCTTGTTCTGACGGCTGCGAGGCTGTTGTTGACACTGGGAC Gene GeneID:337915|PAG21:NM_176630:149_cdna Constitutive 0 NULL GeneID:337915 29 GENE PAG21 NULL pregnancy-associated glycoprotein 21 EMBV3_09888 CTACCACAATCGGGTATCAGTGGGTAGATTTTCCTGGAGCACTTTAAGAAAGGGGGAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32042 CGTGAGGCAGATGTGGACTGTTTGACTTTAGGACAATATATGCAGCCAACAAAGCGCCAC Gene GeneID:530865|LIAS:NM_001017944:29_cdna Constitutive 0 NULL GeneID:530865 6 GENE LIAS MGC137232 lipoic acid synthetase EMBV3_18120 CTTCAAAGATACACTGTCAGAATGCTCCAGAAATAATCTGTCTACCATGACGATTACAAG Gene BVT0102_289222 - 1 EMBV3_18773 GK000005.2:17546892-17858048 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12086 TGAGGATATCTGATCCAGGGGCCCCAAATAGTAGTTGGAGGAAGTTGCAACAGTAGCAGG Gene BVV0101_013557 + 1 EMBV3_22132 GK000009.2:6777135-7083343 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00251625 TCONS_00175509 TCONS_00218428 TCONS_00118459 TCONS_00220566 TCONS_00166913 TCONS_00238581 TCONS_00118040 TCONS_00210913 TCONS_00087260 TCONS_00087259 TCONS_00071091 TCONS_00252081 TCONS_00040258 TCONS_00176420 TCONS_00233473 TCONS_00123823 TCONS_00110425 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00211020 TCONS_00238380 TCONS_00118491 TCONS_00140862 TCONS_00167521 TCONS_00115210 TCONS_00132066 TCONS_00251851 TCONS_00174807 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00078426 TCONS_00170890 TCONS_00174805 TCONS_00171428 TCONS_00231489 TCONS_00010280 TCONS_00205125 TCONS_00174806 TCONS_00161822 TCONS_00125692 TCONS_00002600 TCONS_00207485 TCONS_00031759 TCONS_00006385 TCONS_00198820 TCONS_00000529 TCONS_00170891 TCONS_00103962 45 XLOC_151107 XLOC_154566 XLOC_105290 XLOC_131748 XLOC_072622 XLOC_133883 XLOC_101749 XLOC_145248 XLOC_072206 XLOC_129423 XLOC_052423 XLOC_042864 XLOC_155022 XLOC_024074 XLOC_106198 XLOC_142955 XLOC_075375 XLOC_066329 XLOC_104695 XLOC_129530 XLOC_145047 XLOC_072644 XLOC_085291 XLOC_102357 XLOC_069472 XLOC_080699 XLOC_154792 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_103679 XLOC_103815 XLOC_140978 XLOC_005831 XLOC_124587 XLOC_098707 XLOC_077234 XLOC_000643 XLOC_126001 XLOC_018004 XLOC_001948 XLOC_120473 XLOC_000141 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_08032 TTGTTAGCCTATAGAAGGGGCAGATAGCATTGTCATGAGAGCACGGGGAGAGAGGCTGAG Gene GeneID:282299|PAFAH2:NM_174570:30_cdna Constitutive 0 NULL GeneID:282299 2 GENE PAFAH2 MGC127261 platelet-activating factor acetylhydrolase 2, 40kDa EMBV3_32499 CCAGAAGGGGAGTCTTCAAGGAAATACCGAGAAGTAAGGGATGAAGATGATGATCAGTCC Gene GeneID:100125877|GRINL1A:NM_001105477:2_cdna Constitutive 0 NULL GeneID:100125877 10 GENE GRINL1A MGC140613 glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A EMBV3_41215 ATCAAGAGGTACAATCTGCAGGTGCTGGAGGCTGAAGGAGACATGAAGCAGGCCCTAAGT Gene GeneID:506682|FLAD1:XM_002685988:326_cdna Constitutive 1 NULL GeneID:506682 3 GENE FLAD1 MGC127575 FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) EMBV3_21713 CATAGCTACACAAGCACAATAGTACGCTCTACGTGTTTCTCCTACACACACAGCCACGCC Gene BVT0102_072245 + 0 NULL GK000007.2:52457133-52505096 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43655 CTCATTTGGACCCACGCTCCAATTCAGGAGCAGTCTGGTAACTGGATCTCCTGGGAAGAG Variant GeneID:767906|ARL4A:NM_001076985:53_cdna 96^157 1 EMBV3_39571 GeneID:767906 4 GENE ARL4A MGC127610 ADP-ribosylation factor-like 4A EMBV3_01148 TATGTGGCCATCCTTTACTCCCCAAAGACCTACAGTTTGGAGGCAGGACACAAAGCCCTC Gene GeneID:781264|LOC781264:XM_002692877:64_cdna Constitutive 0 NULL GeneID:781264 15 GENE LOC781264 NULL similar to Olfactory receptor 4C46 EMBV3_41827 GGGAGATTCTGGTCTTCCCCATCACCTTTCTCTTATCCTTAGCATTTCCACTTAGGCCCC Gene GeneID:522462|EFHD1:NM_001075832:191_cdna Constitutive 0 NULL GeneID:522462 3 GENE EFHD1 MGC139784 EF-hand domain family, member D1 EMBV3_17291 CGGAATGTCTCAAGAGGTTGGGGGGTGTCTCCTATAAAGGCCAGAAGAGGTATTTCAAGG Gene BVV0102_033811 + 1 EMBV3_03170 GK000024.2:846950-850300 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16112 TCTTAGAACTCAAATCCCTAATTGTGACCTTATGGAGGGTGCGGTGCTGAGGGTGTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13103 TCTTAACCAGTGAGAACTGTTTGTTTTATGGGGGGGGGGGGGGAAAGGAAGGTAGTTTCC Gene GeneID:538826|SSFA2:XM_002685257:53_cdna Constitutive 0 NULL GeneID:538826 2 GENE SSFA2 NULL sperm specific antigen 2 EMBV3_29393 CAGACATACTGGCCTAGTGCCAGCAGATGGCTTTTCTACAAACTAGGTTAGTATGGAAGA Gene GeneID:539790|POGK:NM_001099100:35_cdna Constitutive 2 NULL GeneID:539790 3 GENE POGK MGC151637 pogo transposable element with KRAB domain EMBV3_10923 GGGAATTAAAAATGAAGCTTAACTACTCTTCTGTTGAGGACCCCAGGTTCTGTGCCAGGC Gene GeneID:540025|RERG:NM_001076198:53_cdna UTR3_Alt 2 NULL GeneID:540025 5 GENE RERG MGC142471 RAS-like, estrogen-regulated, growth inhibitor EMBV3_32078 CTGGCACATCGAGTGTTCCACCATCGCCAGGGCACCTGCACGTGAAGGGCGGAGGAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31672 TACCCATGCTGCAGACTGTGGCCAAGAACAAGAAGATGACAGAGGAAGAAGTAGAGATGC Variant GeneID:281341|MYL6:NM_175780:893_cdna 272^382 10 EMBV3_37072 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_37141 TCTCTATGCTTGTCCCACCTGCCCACGCTCGCAAATGGATGGCAGGATAGTCTGTCTTAT Gene GeneID:537680|DMRTA2:NM_001103281:97_cdna Constitutive 0 NULL GeneID:537680 3 GENE DMRTA2 MGC152439 DMRT-like family A2 EMBV3_13741 CATCGCCTGTCTATTGGTCGTCTATTTGATGTTAGTCCCTGGGCAATGCTTGCTTAATGC Gene GeneID:512064|DIP2B:XM_002687272:141_cdna UTR3_Alt 2 NULL GeneID:512064 5 GENE DIP2B NULL DIP2 disco-interacting protein 2 homolog B (Drosophila) EMBV3_37449 AGTGGGAGGAAGATAGGTCTAGAAAGGTGGACATGTGGAGTCTGAGATGCCTGTGGGTGT Gene BVT0102_041077 + 0 NULL GK000019.2:27689819-27698155 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26428 CCTAGAGGTCTACATTCAATTCTGTAGCATACTTGGAGAAGCTGCATTGAAAAGGCAGTC Gene GeneID:281187|MSTN:NM_001001525:6_cdna UTR3_Alt 2 NULL GeneID:281187 2 GENE MSTN GDF8 myostatin EMBV3_07428 GACAGATATAGAGGATCTTTTCAAAAAAATCATCAACGAGATCCTCGACTGAATGAAATT Variant GeneID:281985|PLCB4:NM_001166510:2_cdna 687^744 1 EMBV3_36673 GeneID:281985 13 GENE PLCB4 NULL phospholipase C, beta 4 EMBV3_19483 TTCTCCTGTAGCCTCTGTCCCCAGCGCTCCCGGGACTTCTCAGCCATGACCAAGCACCTG Gene GeneID:785741|ZBTB32:XM_002694938:44_cdna Constitutive 0 NULL GeneID:785741 18 GENE ZBTB32 NULL zinc finger and BTB domain containing 32 EMBV3_09243 GGACCAAGGAAGAAGAGACCACTAGAGTCCGGGTCTGGAAGTGAGGGTTTAAAAGACAAC Gene GeneID:518030|TAF4B:XM_002697716:24_cdna Constitutive 0 NULL GeneID:518030 24 GENE TAF4B NULL TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa EMBV3_01415 CATACAGATGGTTATTATAATAGCGATAAACCACCACTACCTACGTTCAAAGCAACGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43562 CTCCACTCAAAGTGCGTAGAGAGACTCACATATCGCTCACTGCGTGGGGGTGGCACATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10173 CTCTCCCCTATTTTGTGAAGAAAGCGGGTCCAAACGTGATTCGAACAACTGTACGGAGCG Gene GeneID:616564|SSBP2:NM_001035478:11_cdna Constitutive 2 NULL GeneID:616564 7 GENE SSBP2 MGC129033 single-stranded DNA binding protein 2 EMBV3_30804 CACCCGCAGGCACCACATCCCCGCCCTGGAACCTATTATGCAAACATTTTACTCAGTCTA Gene BVV0102_175327 + 1 EMBV3_39511 GK000019.2:28524592-28541732 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26018 TCGCTGATCTCAGTATGGGCAGTGTAACAGCAAAACCAAAATGGCTGGACAAACTTCTTG Gene BVV0102_131668 + 0 NULL GK000008.2:103024332-103170079 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27092 GTGGAAGGGGAATTCAGGACTGGGGACACATGCACACCCATGGCTGATTCATGTATTTTT Gene GeneID:520412|LOC520412:XM_002692105:325_cdna UTR3_Alt 1 NULL GeneID:520412 13 GENE LOC520412 NULL similar to Protein FAM23A (Brush border protein AdRab-C) EMBV3_04681 TCCAGGGGGCCTAGAAGCAGGCGCATCTGTGAAAAATCCTAGCCTTCAATAACTGTGGAA Gene GeneID:281251|IL1B:NM_174093:11_cdna Constitutive 0 NULL GeneID:281251 11 GENE IL1B NULL interleukin 1, beta EMBV3_33684 TTTGCTGGAATTGCTGTAGGTGCCGCTATGTGGTGGTGCTGGAGAATGAATTGATGTACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13945 CTTCCTTCCCATGAAGCCAGACTCAAGTCCCTTAGCACCTGTGGTTCTCACGTTTTTGTG Gene GeneID:616558|LOC616558:XM_002707698:203_cdna Constitutive 0 NULL GeneID:616558 15 GENE LOC616558 NULL similar to olfactory receptor, family 52, subfamily E, member 2 (predicted) EMBV3_14060 CAGAAGCATAAGAACTCGCCTCTGTCGAGTACTGACTTTAAGACAACTGATTCAGAGGTA Variant GeneID:616238|RNF214:XM_002693000:181_cdna 169^633 1 EMBV3_36498 GeneID:616238 15 GENE RNF214 NULL ring finger protein 214 EMBV3_09391 AACTTGCCTTAAGCTACCAGATTGCTTTTGCCACCATTAGCCATATTGTGTGTTTGTACG Gene BVV0102_068519 + 0 NULL GK000018.2:34850116-34878575 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082869 TCONS_00082864 TCONS_00082874 TCONS_00082863 TCONS_00082867 TCONS_00082870 TCONS_00082868 TCONS_00082873 TCONS_00082861 TCONS_00082866 TCONS_00082871 TCONS_00082862 TCONS_00082872 1 XLOC_051126 Coding TCONS_00082864 XLOC_051126 Coding Coding CBFB 18:34824414-34873700 j TSS62422 3382 3 TCONS_00082864_3 87 0.153459491425192 6 0.931500456528355 0.00263008757232906 0.00234057771872619 0.0023426532453896 0.000821294122316402 0.00217179172659526 1.6385701259845e-07 0.00205715686608987 0.00193584569938215 0.00378383105242032 0.000263018073664063 7.25698785157864e-05 2.63874889268663e-05 2.24071279155548e-07 0.00103503422195119 0.000795500098677091 0.00147068678848536 0.00158254697962937 0.00145186244776759 0.00115749722644056 0.000981824011412826 0.000193293693084325 1.65474252744887e-12 0.000442588147444596 0.00145738362433711 0.00146397521929715 0.00174121913353202 0.00131555325748944 0.000100103491759862 0.000108569906814709 0.000224941399483267 XM_005218718.1 CBFB PREDICTED: Bos taurus core-binding factor, beta subunit (CBFB), 0.0 4787 100.00 0.784447072738025 NM_001755.2 CBFB Homo sapiens core-binding factor, beta subunit (CBFB), transcript 0.0 1865 87.54 0.44795978710822 TCONS_00082864_3 sp|Q08024|PEBB_MOUSE PEBB_MOUSE Core-binding factor subunit beta; 7e-56 174 97.70 0.988505747126437 1 coding 1 1 1 1 -0.213637085225131 0.225858678032956 0.0250216259939505 0.644783312084282 GCCGGGGGCGGCGAATGTTGGATCAGCGCGGGCGATTAAGTACACGGGCTTCAGGGACCGGCCCCACGAGGAGCGCCAGGCGCGCTTCCAGAACGCCTGCCGCGACGGCCGCTCGGAAATCGCTTTTGTGGCCACAGGAACCAATCTGTCTCTCCAGTTTTTTCCGGCCAGCTGGCAGGGAGAACAGCGACAAACACCTAGCCGAGAGTATGTCGACTTCGAAAGAGAAGCAGGCAAGGTATATTTGAAGGCTCCCATGATTCTCAATGGAGTCTGTGTTATCTGGAAAGGCTGGATTGATCTCCAGAGACTGGATGGTATGGGCTGCCTGGAGTTTGATGAGGAGCGAGCCCAGCAGGAGGATGCCTTAGCACAACAGGCCTTTGAAGAGGCCCGAAGAAGGACACGTGAATTTGAAGACCGAGACAGGTCTCATCGGGAGGAAATGGAGGCAAGAAGACAACAAGACCCTAGTCCTGGTTCCAGTTTAGGTGGTGGTGATGACCTCAAACTTCGCTAATTGGTGGCACAAAAGATGTGACCCCATCTTTACACATTCATTGTTTCTAGTCTGCAGAAATAATTAATTAAAAGACCAGAAACTGTGATAACTGGAGGTACTACGGTTTATTTCTCAACCTTAGGCAGTAACAAGACATCACAAACTGCCATGGTTTTGCACTATAATACCTGCATTTCTAATTAAGTATGCATGTAGCCAGTAATAATTTGAAATTTTTTTCTATGCAAGCTTATCTTGTTGGCATTATTTTAGTGAGTTGAAACTATCCACTTGTAAAACTTTTTTTTTTCCTTCATTTTAATTTAAAAGTTCATGCCATTTTTAAAAAGTCAAGAAATTAAAATTTTTACCAGAGGGTTTTCCCCCCTCCTTATCAGTTGCTCTAGTTTTTTTTTTTTTTTTTTTTTTTTCAGTTTTAGATGTGTTGGTTATTCAGCTTCATTTTAGATAAACATTCTTGGCTTTTTGTTGTGTTTCCCGTTTCCTTCTGTGTTTTTATAGTTTATGGCATTTTAAAACTGCTGATGGTTTGCATTATTTACAAGCTAAAAACCTTGTAGCATAGAGCTGTCTGCCATGCCTTCTAACACAAAGTTTACAGTTGTTAAAGTTGCAGTATCCTTTTAAATGTTGATAATCAGCTCCTTTTCTTTCCTTTTTAAACATAAAAAAATTGTAATTGGAATTAACTCTAGTCTGCCCCAGATCATTTTAGATTCTCTTCTATAATCATGAGTTTGTATGGAGATATTCTCAATATCCTACTGAAATGCCTAAAGAAGTCACAGGCTGGCTTCTGTTTTATTCAGGGATTTTTTTTTTTAAGTCAATCAGAAAAGGGATACTGGAGCTTCTTCATGTATGTAACAGCATATTAAACTGGAGACAGTGATGAATCAGCTACAAAGGTAATATTGTATTAAAATCATGTTTAAGATAGCTGCTTTTATGTGTATTTTATAATGCATGCTTTTGTAAAAACAATGCTGAGTGATGAAAAATTAGTCTTAGAAAATGTACATCTATGCAGAGGGTACATTTTCTTCCATTTATTATTCTGGAGAAAAAATTCACAGGTTATATATATATGGTATTTTCCAAAAGGACTATTAATAGAACCTTTTGAGATGAATTAGTATAAGAATATTTTTAAAATAGGCTCATTGTCAAATTGATTGCAGCTTTTTTTTTTTAATACAAACTGGAAAAAAACGTAAGTTATTTGGCACCTTCTTACAAATATTTTTCATGGTTACATTCATTTAATGTTACTACATTTCTGAAGTTTTGCAAAAATGTATTTTAATGGCATTATTATAAAGAGTTTGAAAAAACTGACATGGTCAATTCAGAAAATGAACTGAAGTCTGAATAAGGTTATTGGATTATATACACTTGACTGATGAGGGAGGTGTGACTTTCAATGTATATAGGTCTTATAATTCATAAACATATCCTGTATCTCAGAATAAAAGTATGTGTTATATATTTGAAGTCATGCATGGTAAGGAGTGTGTTTAAATCATTATAAACAATATGCATCATAAAAGACCATGCTGATCTTGTGTAACTAAGTACTATGAATGAATTGGTTGGATTTTGATATTGTGCAGCTCACATGTTTACACACTCAGTGCCCTAATTTCCCTTGAGGGAATCGCCTTTTAAATGGTCCTTCCAGTGCTGTTTTAAGGTTACTTTATCACAGAGCTCCTTGGTTTTTGACTCTGCACTTAAATTTTGTTTTTTTAAAAAACATGATGATGGCACATTTTTTCTATTGCTTCTAGCTAAGGGCTTTCAGTCCACCAGTAACTAAGATCAAACGTTATTAAATGTTCATGTTACCATCCTTCTGTAAATACGGGATTGTTCTTGTCATTTAGCATTGTACTGCTTCCATCTGTCTTAATGCTGGCATTAAGATCATGAGCCCTTTTTCTCCAGTAGTGCAGGCTTTCAAAACTTTTATTATTAAGTTATTGATGCAATTTGATATTTTTCCATAATCTGTATTTAAACAAAATTACATCATTGCATCATCTTTTCTAAATTCATCTCCATTAAAACTTGCCTTAAGCTACCAGATTGCTTTTGCCACCATTAGCCATATTGTGTGTTTGTACGTTTAATTTACTTTCACAATAAACTTCTGTGTAGTGAACTTCTGGGTCTTGGTTCTTCATTAACAATAATCCAGCAGTTTCTGTTCCAGTGTTCATTATGGCACAAAAATTGATTTTGTATCTGAACTGTTCTTGCATCCTATTTACCCTTAAAAAAAAAACCCAACAGTGGCATCTAGTGGTCATTTCTGTTAATTCCAAAGAAAACCTTTATGTCGGGGTCCAGCCCCAGCAGGATCCTAGGGTACCCTCAGGAAAGACAGCGTCGGCGAGAGAGAGATGACACGGGTCTTATAATGGATTTAAACCTGATAGTCCAGGGTCGAACGATAAGAGAATAAAGGAGAAAGAATAAAGAGAAGAGAAAGAGGCTTGATCTTCTTTGATTAACACAGAAAGCCAATAAAGCTCCTGTGTTCCAAGGAGTCATCTTGAAAGAAGAACAGAGAGAGAAAAGGAGGGAAAAGGAAAAAAAGAATGACACGAGGAGACCAAGCTTCAGTGAGCGAGGCCCATAACTTTATTTTCAAAAGGAACTTTTGTACCTTGACTTGTACATAGAGGGAAATGAAAGATACAAAGTCATACAGAGTCAGCCCAAACATTACATCTGTTTTGTCTTTATCAAAACCAGGATTTTTTCTGCATACCTTTCCCATAAACAATGTTGTGTACAATATCTTCTGGCCTTGGAGGCCTGTGGACATTTTATGACCCTTTTTTGATAAAGGCT EMBV3_03894 ATTGAAAAGTTCGAGAAGGAGGCTGCCGAGGCTGACTGTGCTGTCCTGATCGTTGCTGCT Variant GeneID:282220|EEF1A1:NM_174535:33_cdna 179^358 1 EMBV3_07846 GeneID:282220 9 GENE EEF1A1 MGC126913 eukaryotic translation elongation factor 1 alpha 1 EMBV3_23611 CGACAGCGGTATGAAAACGAGGGAAAGGCTGAAAGGAACAGGAGTGGGTTACTGAAAGCA Gene BVV0102_152510 - 0 NULL GK000017.2:49090246-49197828 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075374 1 XLOC_046562 Coding TCONS_00075374 XLOC_046562 Coding Coding TMEM132D 17:48199003-49092139 = TSS56854 5188 1 TCONS_00075374_6 1097 0.023130300693909 9 0.994201324547801 3.35619139063793e-06 1.93686059128338e-06 6.44984504970946e-11 0.000115246476084193 4.17190492052057e-11 3.08582469387565e-26 0 8.52917791718108e-18 1.86832240012195e-05 0 0 5.51311713858703e-06 0 0 3.11139332950774e-14 0.000285089834674381 0 0 0.000105739017767154 0.000158716172329565 4.68724907404664e-06 0 4.80627014288805e-11 8.65605291298309e-05 1.70323292059548e-32 4.41472287549965e-11 0 0 0 0 XM_002694460.2 TMEM132D PREDICTED: Bos taurus transmembrane protein 132D (TMEM132D), mRNA. 0.0 9357 100.00 0.999807247494217 NM_133448.2 TMEM132D Homo sapiens transmembrane protein 132D (TMEM132D), mRNA. 0.0 3577 83.58 0.647841171935235 TCONS_00075374_6 sp|Q14C87|T132D_HUMAN T132D_HUMAN Transmembrane protein 132D; 0.0 1889 84.71 0.999088422971741 0 coding 0 0 0 0 -0.0147865176952449 0.907197101490387 0.000633115102055465 0.990073107098983 ATGTGCGCGTCTGCGATGGGGACGCTGTGGCACCTCTGGTCCCCCGTGCTCATCAGCCTGGCCGCCCTCTTCTCCAAAGTGGCTGAAAGCCGAGGCATACTGGAGAGTATCCAGAGGTTCTCTTTGCTGCCCACCTACCTCCCGGTGACCTACCACATCCACCACGCAGACGTGTCCTTCTTCCTCAAGGAAGCCAACCAGGACATCATGAGAAACTCCAGTCTACAGTCGCGGGTGGAGTCCTTTCTGATTTACAAATCCAAGAGGCTACCAGTCCTGAATGCCAGCTATGGGCCTTTCGCCATTGAGCAGGTGGTACCCCAGGACTTGATGCTCCCCTCCAGCCCCTTTGGATTCACCAGCACGTTTTCTCTGAACTGGAAGCTGAAGGCGCACATCCTGCGGGACAAGATCTACCTGAGCCGGCCCCGCGTGCAGGTGCTGTTCCACGTGGTGGGCAGGGACTGGGACGACCCTGGCCCGGTGCAGAGCCTGCCCTGCCTGCGGGTGTTCGCCTTCCGGGAGACCCGGGAGGTACGAGGCAGCTGCCGCCTGCGGGGGGCTCTGGGGCTGTGTGTGGCGCAGCTGGAGCTCCCGGCCAGCTGGTTCGGCCCCCCGACGGTGGTGGCCGGAAGGAAGAAGACGCCGGAGCCCCCCGAAGGGAGTCCGGTGGAGCTCTACTACGCCGTGCAGCAAGGGGACGACCGTGGAGACTGCGCCAAGGAGGATGCCCGGAGAGCCGGCGGTATGCGGACGGGCCGTAATGACATCGATGAGTCTGGGCCTCCCTTGCACAGGATCGGGAGTGTTTTTCTTTACCAGACCCCCAGCCGGCCGCCGCTGAGAGAGCTGCGCTTGGATAACCACGTGGCTGTGCAGTACGTGCCAAAGACAGTCAGGCAGGGAGACGTGCTGACTTTTCCAGTCTCCATCTCCAAAAACTCCACCGAGGACCGCTTCACGTTAAGGGTAAAGGTGATGAAAGGCATGAACATCATTGGGGTGAGAGCCAGCAGCCCTTCCGTGTGGGAAGTCAAGGAGAGCACAGATTATGCTGGGAAGTACACACCCGCTGTCATTGTTTGTCAGAAGAAGTCGGCTGGCTCGGAAAAAAGTGCTAACGGTGCCTCCTATGAAGTCATGCAGATCGACGTAGAAATCGAAGAACCTGGTGACCCGCCAGCCACACAGCTTGTCACATGGCAGGTTGAATATCCAGGAGACATCACGTCTGACTTGGGTGTCTCCAAGATCTACGTGAGTCAGAAAGACTTGATCGGAGTCATCCCACTGGCCATGGAGGCGGAAATCCTGAACACAGCCATCCTCACTGGGAAGACGGTGGCCGTGCCCGTGAAGGTGGTCTCTGTGGAGGAGGACGGTGCGGTGACAGATCTCAAGTCCGTGGAGTGTCGATCGTCTGATGAAGATGTCATTAAGGTTTCTGACAGATGTGACTACATCTTTGTCAATGGGAAGGAAATGAAGGGCAAGGTGGGCGTGGTGGTGAACTTCACCTTCCAGCACCTGAACACTCCTCTGGAGATGACGGTATGGGTGCCCCGGTTGCCCCTGCAGATCGAGATCTCGGACACTGAGCTCAACCAGATCAAGGGCTGGAGAGTCCCCATCGTCTCCAACAAGAGGCCAGCTCAGGACAGCGAGGAGGAGGATGAAGACGAGAAGAGGAACAGGGGCTGCACGCTCCAATACCAGCATGCCATGGTGCGGGTCTTGACTCAGTTTGTGGCGGAAGCGGCTGAGCCTGGGGGGCAGCTGGCCCACCTTCTGGGCTCCGATTGGCAGGTGGACATCACGGAGCTGGTAAATGACTTCATGCAGGTGGAGGAGCCCCGGATCGCTAAGCTGCAAGGGGGACAAGTCCTGATTGGCCAGGAACTGGGGATGACCACCATTCAGATCCTGTCGCCTCTGTCAGACGCTATCTTGGCTGAAAAGACGGTCACCGTGCTGGACGAGAAGGTGACAATCACAGACCTTGGGGTCCAGCTGGTGACGGGACTGTCCCTCTCCCTGCAACTCAGCCCAGGGAGCAACAGAGCCATCTTCGCCACTGCGGTGGCTCAAGAACTTCTGCAAAGGCCTAAACAGGAAGCAGCCATCAGTTGCTGGGTCCAATTCAGTGATGGCTCCGTCACCCCCTTGGATATTTACGATGCAAAAGACTTCTCCCTGATGGCCACATCCCTGGATGAGAAGGTGGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATAATTGCCGCTGAAGCTGAAGGACAGGGGGCCCTGGTGAAGGTCGAAATGGTCATTTGCGAATCGTGCCAGAAATCCAAGCGGAAGAGCGTGCTGGCTGTGGGGACAGCCAATATCAAAGTGAAGTTTGGCCAAAACGATGCCACCCCCAATACCAGTGACAGCAGACACACAGGGGCAGGAGGTCGCCTGGATAATAACATCAGTGACAGAAGACCCAAAAAGCCCTTGCAGGAATGGGGGAGTCAGGAGGGAGAGTACTACAGCAGTTCCTCCATGGGCCTCATGGAAGGCAGGGGCTCCACAACGGAGAGGTCCACCTTCCAGAAGAACAGGGGCCAGGAAAGCCTTCTGGATGATGGCAGCCATTTGCAGACCATCTCCATCGACCTCACCAGCTTCCCAGCCCAGGTGGACCTGCCCAGAAGCCATGGGGAGACAGAGGAGAACGACCCCCAGTCCTCCAAAGGGCTGAGCGACCTGGAGATCGGAATGTATGCCCTGCTGGGGGTCTTCTGCCTGGCCATTTTGGTCTTCCTCATCAATTGCGTGACCTTTGCATTAAAGTACAGGCACAAACAGGTCCCCTTCGAAGAACAGGAAGGGATGACTCACTCCCACGACTGGGTCGGCCTGAGCCACCGGACGGAACTGCTGGAGAACCAGCTCCACTTTGCCTCCTCCCAAGAGGAGCAGATCACCGCCATCGACAGGGGCATGGATTTCGAAGAGAGTAAGTATCTGCTCTGCACAGACTCCCAAAAGAGCATCAACGGGCAGCTGTTCAGATCTTCAGGACCCACCCTCATGGACGGGAAAGATCAGAAAAGCGAGCCCCCAACGTCCCCTACCTCAAAAAGGAAAAGAGTCAAATTCACCACTTTCGCCACCCTCTCTCCAGAGGATGGATGCCCTGCTGTGAACTCCCTAGCGGCCAGCAGGGAGGATACCGTGAACTGGGTCGGCCAGGATCTGGACCCTGGGGGAGGCCAAGAGTCACATGGCTACAGGGAAGGATTACGTGAAGATGTGTAAACTGGGCATTCGCAGACATTGGTTCTCACTCACCTTTCGGCCTTTAACTTGGGGATTCGGGGCAACGGGGACCGCAGTGGGGGGAATGAAAAGACAAGGGGGACTTCCATGGCAGTCCAATGGTTTAGGACTCAACACTTCCACTGTAGGGGGCGTGGGTTTGATCCCTGGTCAGGAAACTAAGGTCCCCCATGCCTCCAGGCGTGGCAAAAAAAAAAAAGGGACACGATCAGGCTGACACTATCCACAGAGCCCCAGAAAACGACCCTGGCTCCCCCAGGGAGGCCCCGAGTTGGAATCAATGTCCACATTCCAGGGTCCGATGTCTCAGTCGATGAAAAGAGGTTTATCACTCATGGCGAGATTTTTTTTCAACTTGGAAGAAAAATGAGTTCTGAGTCACTGAGCTTCCGACAGCCTCCAGGAAAAAACTGTCCCTCACTTGCCATCTCTCTTTCTTTAATCGAAGCAATTTGGATACAGCCAAAGCCACATGGCTGCAATATTCAATGTTGCGGACCACAGGAAAAAAAGGAGACTCAGGTTGGGCGGGCTGGATGGGAGGAAGTGCGTCATGGAAACTCACCTGGCTGTGAGCCTGAGCAGAAGCGGAGTCTAGCGCCGCCTAGAGTCAGCTCTTGGGAAGTATGATTTCCAATTATCTCCCACAGGCTGGGTCAGGGTAAACCCGGGTTATTGACAAACCAAGGCAATCGTTGACAAGGGGTTGAAAGGGAACAAGAGGGCAAACAGGTCACCAATACCTTTGTAACTAGATGTCAAGAACAAACACCCAGGAAACTAAACCCTCTGAGCCATTCGGAGCATCCCATTATTGGTAAACTAGGGATCCTGGGCATAGAGTTTCAATCAGGTTCAAAGAACCAGGCTTTTTTTTTTTTCTTTTTTAAGCAAATTTACTCTGTTCACATTTGTACCCTTCCTTGCATTGCCACCTTTGCAAAAGTCATTAATCACTCCTGGGCAGTGGGGAGCCGTGTCACTGTTTGCTGAGTCTCTTCCACCGTGGCCTCTGTGTCAATCAGTCTACACTGAAGCCCCATGGGGCCAACTTCACACGTGTCTTGCTTTGAAAAGGCTAGTCTTTGGGGGTCAGCAGTGCTCACAAGGAATACAACACCCAAGGATGCTCATTCTCCTGGCTTTTCTGGAAAGAAGGGAGGGATGGTCTGTGATGGGTCTTGCAACAGTCCCATCTGGTCTGCTGTCCAAGGCTGCTGAGATAAATCTGGGCATGCCCATAGAGGGGTACAGGGTGAGGAGAGTTGAGATTCAGTGTGTGTGACGAGGGTTGGGCAGGAAATCTGGCCCCCCTCACATGTGGGGAGAACATGAGGCTGCTGCTTCTTCACCTTGGAGGGATAGAGGGACCCATGGTACCTGCCTATGGGACAGAGAGCTGGGTTATTCGAGCATTGGGTTCTAAAGTCAATTTCTCTTTCTCTGTCTCTCTGTCTCTACGTCTCTCTGAACCTATCTCTCTGTTTCCTCTCTCTCTGTGTCTCAGTCTCTCTCTGTGCATATAATTGAATTCTCCTGAGATCAAGTGTGTAATTCCACCAGTTCATCCTCTCAACCTCAGCACTCTCTCTAAAACTAAGGTGCTGTCCATTTGCCCTAACACTGAGAGTCCAGGAGCCATCAGCCACCTGCTCCTGTCCCCAAGTTGACTTACATTGTCTGGCTGGGTGACTAAACGGTCACCCTTTTTTCAATGATAATCCTTTGCTTTCAGTAACCCACTCCTGTTCCTTTCAGCCTTTCCCTCGTTTTCATACCGCTGTCGATGCCCCCTCTCCAATCCGTCTGTGTGCAGAATGTATTGTAGATTATAAGAATGTAATATATATTTATAAACTTACCGACTGTAAAT EMBV3_26474 TCCTGATGAATTGTATGTGGTGGGAAAAAGGCAAGGGGAAGCAAGGACCCAGGGGTGACT Gene BVV0102_131666 - 1 EMBV3_33371 GK000017.2:55873789-55899387 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080896 1 XLOC_049778 NonCoding TCONS_00080896 XLOC_049778 NonCoding NonCoding - 17:55885697-55886021 - TSS60836 324 2 TCONS_00080896_2 62 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000391999388817945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0147936398267981 0.895195512902845 0.0250841785132222 0.715375481443183 CTCCATGCCCAGCTGTCTCCTGACCTTGGAATTTCTCCTCAGCCTGGCCGCCTTTAATCCGCTGCCCTGGCTTGTAAAAGCCTTTTAGACTGAGGGCATTTATTTCCCAGAGAACTATTCCAGCCTAATCACATAAAAATGCCCAGCATCCCAGGAGCAGACTGTCAAGTGCAATGTGGTTCTGTGGTTCTCTCCAGAGGCCCTGGAGAAGGGGAAATTGGGGTGCTGATCATCCTAGGAGTCACCCCTGGGTCCTTGCTTCCCCTTGCCTTTTTCCCACCACATACAATTCATCAGGAAACCCACATTTTCTTAAAATCTCAG TCONS_00077458 . 5' 11865 TCONS_00077458 . 5' 11865 EMBV3_10482 GGGAATTCGCATAAGGATAACAGCTGATCTTTCGATAAAAAACCTCTCAAGCCAGGAGGG Gene BVT0102_153709 + 0 NULL GK000007.2:99035257-99647740 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16884 GATGAAGAGGGCAGAACTCTACTCCACTGGGCTTGTGATCGAGGACATAAGGAACTAGTC Gene GeneID:618245|ACBD6:NM_001083783:222_cdna Constitutive 0 NULL GeneID:618245 16 GENE ACBD6 NULL acyl-Coenzyme A binding domain containing 6 EMBV3_25294 CCTTCGAAGATTTACGAGAGAAGCTCCTCATGGCTGTGGAAAACGCCCAAGGCTTCGAGG Gene GeneID:510003|NEDD4L:XM_002697776:336_cdna Constitutive 0 NULL GeneID:510003 24 GENE NEDD4L NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like EMBV3_40366 CATCAAGTATGGCGAACTCATCGTTCTGGGCTACAATGGGTGTCTGGCAAGTGGGGACAA Variant GeneID:504839|PELI3:XM_002699357:254_cdna 153^224 1 EMBV3_17377 GeneID:504839 29 GENE PELI3 NULL pellino homolog 3 (Drosophila) EMBV3_14159 GCAGCCAGAGCCGGAAGGGGGCAATCGCAGCCCCAGAGAGACATTATCTATAAAATTGTA Gene BVT0101_003722 + 0 NULL GK000003.2:18475523-18482656 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115686 TCONS_00206812 TCONS_00231338 TCONS_00066283 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00177370 TCONS_00175855 TCONS_00218945 TCONS_00169198 TCONS_00175580 TCONS_00250930 TCONS_00166977 TCONS_00008224 TCONS_00021569 TCONS_00137878 TCONS_00244654 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00038458 TCONS_00229819 TCONS_00041057 TCONS_00185881 TCONS_00062744 TCONS_00109027 TCONS_00000305 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00039226 TCONS_00064462 TCONS_00178325 TCONS_00161667 TCONS_00010054 TCONS_00040836 TCONS_00065823 TCONS_00209032 TCONS_00140840 TCONS_00110323 TCONS_00130290 TCONS_00063486 TCONS_00020756 TCONS_00249772 TCONS_00010471 TCONS_00088088 TCONS_00021595 TCONS_00117619 TCONS_00199424 TCONS_00161835 TCONS_00071033 TCONS_00059708 TCONS_00177281 TCONS_00198813 TCONS_00170823 TCONS_00249569 TCONS_00116665 TCONS_00222114 TCONS_00131550 TCONS_00199037 TCONS_00122479 TCONS_00152645 TCONS_00249639 TCONS_00210234 TCONS_00252353 TCONS_00224113 TCONS_00007677 TCONS_00229957 TCONS_00152736 TCONS_00116100 TCONS_00250720 TCONS_00169197 TCONS_00038381 TCONS_00242885 TCONS_00209846 TCONS_00023373 TCONS_00207069 TCONS_00175546 TCONS_00209711 TCONS_00116172 TCONS_00252107 TCONS_00148280 TCONS_00056146 TCONS_00249011 TCONS_00176735 TCONS_00031939 TCONS_00169199 TCONS_00131137 TCONS_00039951 TCONS_00063181 TCONS_00009259 TCONS_00111497 TCONS_00209636 TCONS_00019961 TCONS_00245928 TCONS_00089952 TCONS_00233372 TCONS_00244651 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00085967 TCONS_00039904 TCONS_00199802 TCONS_00207755 TCONS_00250246 TCONS_00209558 TCONS_00238327 TCONS_00040179 TCONS_00064619 TCONS_00200529 TCONS_00244653 TCONS_00056820 TCONS_00135546 TCONS_00115148 TCONS_00250726 TCONS_00221884 TCONS_00142649 TCONS_00122313 TCONS_00251907 TCONS_00218552 TCONS_00007359 TCONS_00166449 TCONS_00031910 TCONS_00251929 127 XLOC_069855 XLOC_125332 XLOC_140827 XLOC_040997 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_107144 XLOC_105634 XLOC_132264 XLOC_103305 XLOC_105361 XLOC_153873 XLOC_101813 XLOC_003782 XLOC_012242 XLOC_084087 XLOC_150512 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_022282 XLOC_139313 XLOC_024868 XLOC_111934 XLOC_037471 XLOC_064932 XLOC_000084 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_023044 XLOC_039186 XLOC_108098 XLOC_098554 XLOC_005606 XLOC_024650 XLOC_040542 XLOC_127543 XLOC_085269 XLOC_066227 XLOC_079001 XLOC_038213 XLOC_011431 XLOC_152715 XLOC_006022 XLOC_052875 XLOC_012268 XLOC_071785 XLOC_121077 XLOC_098720 XLOC_042806 XLOC_036490 XLOC_107055 XLOC_120466 XLOC_103665 XLOC_152512 XLOC_070831 XLOC_135423 XLOC_080255 XLOC_120690 XLOC_074034 XLOC_092410 XLOC_152582 XLOC_128744 XLOC_155294 XLOC_137409 XLOC_003238 XLOC_139451 XLOC_092501 XLOC_070269 XLOC_153663 XLOC_022206 XLOC_149548 XLOC_128357 XLOC_014040 XLOC_125588 XLOC_105327 XLOC_128222 XLOC_070341 XLOC_155048 XLOC_090162 XLOC_033949 XLOC_151954 XLOC_106509 XLOC_018184 XLOC_079842 XLOC_023768 XLOC_037908 XLOC_004815 XLOC_067397 XLOC_128147 XLOC_010639 XLOC_150855 XLOC_054733 XLOC_142854 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_052005 XLOC_023721 XLOC_121454 XLOC_126270 XLOC_153189 XLOC_128069 XLOC_144994 XLOC_023996 XLOC_039343 XLOC_122181 XLOC_034623 XLOC_081769 XLOC_069449 XLOC_153669 XLOC_135195 XLOC_087074 XLOC_073868 XLOC_154848 XLOC_131872 XLOC_002920 XLOC_101287 XLOC_018155 XLOC_154870 Coding TCONS_00245928 XLOC_150855 Coding Coding - X:137876964-137888512 - TSS184515 5441 1 TCONS_00245928_4 267 0.927770630398824 2 0.528968563263185 0.000897282390755376 0.000985138621395062 0.000679966132465394 0.000237237831259057 0.000568011132192381 0.000175732963127942 0.00054373138769722 0.000124872322741693 0.000226377822321319 2.34408665786025e-05 4.06971677171706e-06 3.17881490021353e-06 5.53108689583375e-06 1.15952953248486e-05 7.90342605753742e-06 6.1146071856894e-05 1.4073564546935e-05 5.46125915401409e-05 0.000240415514785315 0.00031228486567747 0.000302687179985164 1.63930844339758e-05 1.94334604293771e-05 2.02916089306998e-05 0.000825095136962281 0.000873719722104107 0.000338522689881364 1.29717332028776e-05 8.41627519289757e-06 1.36053048170254e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1299 93.40 0.158426759786804 XR_248914.1 LOC101926889 PREDICTED: Homo sapiens uncharacterized LOC101926889 (LOC101926889), misc_RNA. 1e-27 131 70.31 0.053299025914354 TCONS_00245928_4 sp|Q10126|YSM6_CAEEL YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6; 3e-08 54.3 25.64 0.531835205992509 1 coding 1 1 1 1 -0.00467391936394584 0.982742153247782 -0.138493667873966 0.0421444453268451 GGTAGGATTGCATCTGATGGAAGCACTGGCCAACCAGAAAACTCCTGGATGCCAAAGTTTGGATGGAGGGGGAGCCAGAGGCACAGGTGCCAGAGAGTGAGTTGAAACCATATTAAGGCAAGGTGCCAAACATCAGGGTGTCCAAGTTTGTCCACAGATCAGGTGTGGGACTGGTGGAGAGAGGCAGGAAGTAGAACCAGAATATTTGGAGCTGAGAAGAGGCAGTGATGGAGCAGGAACTGAGAAAGAAATCCTGGAACCAGGATATTTTAATGTGTGGGGCTTCTCTGAGACAAGATTCCTCAAATATCCAGGAAACTTCTCACAAACCTACCTCTCATGACTACATTCAAATAAAGCTGCAATTAATGTGGTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAATCGTGAACTTCCAAATGTTCAAGCTGATTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCACTGGATCATCAAAAAAGCAAGAGAGTTCCAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGACTGTGTGGATCACAATAAACTGTGGAAAATTCTCAAAGAGATGGGAATACCAGACCACCTGATCTGCCTCTTGAGAAATCTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAAACGCTGGGCTGGAAGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAAAGCCTCTTGATGAAAGTGAAAGTGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCCTCCGGTCCTGTCACTTCATGGGAAATAGATGGACAAACAATGGAAACGGTGTCAGAATTTATTTTTTGGGGCTCCATAACCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAAACTAGACAGCAGATTAAAAAGCAGAGACATTACTTTGTCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCTGTGGTCATGTATGGATGTGATAGTTGGACTATAAAGAAAGCTGAGGGGAAGAGCCAAGATGGCGGAGGTGTAGGATGGGGAGAACACTTTCTCCCCCACAAATTCATCAAAGAAGCATTTAAACACAGAGTAAATTCCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAACCCAAGTCTTCAAAAGGAGGTAGGAAAAAATATAAAAGACAAAAAAAAGAGACAAAAGAGGGAGGGACAGAGTTCCGTCCCGGGAAGGGAGTCTTAAAAAGAGAGAAGTTTCCAAACACCAGGAAACCTTCTCACTGCCGAATCTGTACCGAGCTTTGGAAGCACAAAGGGCAACATAACAGGGAGAAAAACAATTAAAACCCGCAGATTGTGAGCCCTACGGTAACTCCTCCAGCGGAGAAGCAGCGCAGACGCCTGCACACGCCATTAGCAAGCGGGGGCTGGGCAGGGAGTTGCGGCACGTGCTGCATCACTTAGAGTAAGGACCTGGCCTGAATACCCTGAGCGCTATCTGAGTGAATAATTTGGGCTAGCAAACCAGACTGTGGGATATCTACCACGCGAAAAGCCAGCCCCTAACCTAAGACACCACCAGGCCCGCACACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCATCTGGTGACAGGCAGCCAGAACTGGAAGGGAGCAATCGCAGCCCCAGAGAGACATTATCTATAAAACTGTAAGCAGGCTTCTTTGCTAACTAAAACTTCTTGAGGGTCTGGACGGTCAACATCTGCCTGAGAAGGTGTGCCAGTGCACACCTAGATAACCAAGCGACGGGGAGGCGATAAGTCGCAGCAGTTGCGCTCGCCAAACACCTCATCACCTGAGCTGCTTGGACCTGGGAAGGGCACAAAACGCAGGCCCAACCGAGTCTGTGCCTCTGAGGACTACCCGAGTGTCTGAACCTGAGTGGCTTGGAACTGGGAGGTGCAGGCAGCCCAGGGCCGGCCACGGATGGTTCCCAGCAGAGCAACCTAGAGCCTGAGCAGTGTGGGCAGGGAGGCTACACGCGCCGTGAGCGGGGGCAGACCCAGTGTGAATGAGGCACTTCGAGCACACGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAGTGTCCTCCACCGTCCCCTTTGTGTCAGGGCAGAAACCAGACACTGAAGAGACCAGCAAACAGAAGAAGCTATAACAGAGGGAACCACCTTGGAAGCTACAGGCAATAGATTAAAACCCTGTGGTTACTACCTACTACATAGGAAGGGGTCTATAGATCTTGAGAAATATAAGTCGGACAAAGGAACTAACCAAAAATGAACTGAACCCACAATACTCACAACAAAACCAGAGAAAGTCCTAGATATATTTTTACTGTTTTTACGATCATTCTTCTTTCTTTTTTTTTTTTAAATTTTTAAAAAAAATTTTAAGTCCTCTATTATTCCTTTAATTTTCACTTTTATAACCTATTACTTTGCAAAAAAAAAGACCCTATTTTTTTTTCTTCAGCAAACTTCATATATATATTTTTTATAATTTTTTGACCTTGTTTTTTTTTTTTCTTCTTCTTCTTTTCTTTAACATTGTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTAGCTTTTTGGTATTTGTTATCAATTTTGTACCTATAGTTTTTCTTATAATTTCTGTGACTTTTTTTTTCTCTGTTTCTTTCTTTTCTTCTTTTATATAACATTGTATATCTGAAATTCCAAACTCTACTCTAGGTTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGCGACTTTGTTTTTGTTTTTGTTTTTGTTTTCTCTCTCTCTTTCTTTTTCTTCTTCTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAACTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTATATTTTCTTTATAATTTTCGCGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAACCTCTACTCTAGATTTTTAATTTTTGCTTTTATGTATTTGTTACCAATTTTGTACCTTTAGGAACCCAATCTTCAGCACCCATTTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTTTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTGTGTGAACTTCTGTGTGTTCCAGACAGTGGAGAACACTTAGGGAACTGATTACTGGCTGGTTCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCTCCTTCCTCCTTCTTTGTATAACTCCGTGAACATCTCTGAGCAGTCCAGTTGTGGAGTGCACATAAGGAAGTGATTACTGGCTAGCCCACTCTCTCCACTATTGATTCCACCTCATCTCATTCGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACGCTGTGAACCTCTCTGGGTGACCCTCACGATAGAGAAACTTTTCATCTTTAACATAGATGTTTTATCAGTGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCAATAACTGGAAGTAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTACAAGGAACATTAATTGACAGGAGCTCATCAAACGCCTCCATACCTACACTGAAACCAAGCACCACACAAGGGCCAACAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCACTGAGCTTCAAGATACAGGTTGCCCAAAGACACCCCAAAACCAAAGACGTCTCATAACTCATTGCTGGACACTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAACCAGGAAACCTTGACGAGCCACCTGTACAAACCCACACACAGCAAGGAAATGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAAATCAGCAATTTAAACAAGATGAAGAGACAGAGGAATACCCAGCAGATAAAGAAACAGGATAAATGCCAACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATTATAGTGAAATTGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGAAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGTCAATATATAATGAATAATGCAATAAATGAAATTAGAAACAATCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATAGTAGAAATAATTGAATCAAGATAAAAGAAAAATGAATTAAAAGAAATGAGAATCTCAGAGACCTCCAGGACAATATTAAACGCTACAACATTCGAATCATAGGGGTCCCAGAAGAAGAAAACAAAAAGAAAGACCATGAGAAAATACTCGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGCGGAACACCCCAAGACACATATTAATCAAATTAACAAATATCAAACACAATGAACAAATATTAAAAACAGCAAGGGAAAAACAACAAATAACACACAAAGGAATTCCCATAAGGATAACAGCTGATCTTTCAGTAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGATAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAGCACAAAAACAGTGTATAAAATCAAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTGTCAGTAATTACCTTAAACGTAAATGGGTTGAATGCCCCAGCCAAAAGACATAGACTGGCTGAATG TCONS_00248504 r 5' 161696 TCONS_00248504 r 5' 161696 EMBV3_17529 CTTCCAGTGCATGGAGGTGCAGGTTCAATTCCTGGTTGGGAGCCAAGATCTCAACCTTTA Gene GeneID:511017|DUS4L:NM_001101937:42_cdna UTR3_Alt 2 NULL GeneID:511017 4 GENE DUS4L MGC155137 dihydrouridine synthase 4-like (S. cerevisiae) EMBV3_32683 CTTTCGGACCACTTAGATTTTCTGGTGTAACCTGATGGCTACTTGGTTCTGGTACAGGCC Gene GeneID:511121|LOC511121:XR_084541:341_cdna Constitutive 0 NULL GeneID:511121 15 PSEUDO LOC511121 NULL similar to Ubiquitin carboxyl-terminal hydrolase 47 (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47) EMBV3_42888 TACAGTCCCTGCGGCCACAGAGTCAGACATGACTAAGCAACTAGCACACACGGTTTTCTT Gene BVV0102_009915 + 0 NULL GK000011.2:80266804-80577825 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29231 ATCCAGTGTGAGAGGTGGTTGTCTTCTAATACTGTGAGATGTGCCCCGTGAACTGAGAGG Gene GeneID:516314|NOL10:NM_001075740:138_cdna Constitutive 0 NULL GeneID:516314 11 GENE NOL10 MGC142613 nucleolar protein 10 EMBV3_18853 TAATTAGTGTTTATGGAGTACCTCTTTGAAACCTCTGTGGCCTGGGGTTGGGGAGGGTCG Gene BVV0102_169038 + 0 NULL GK000001.2:130108429-130208625 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005221 TCONS_00005224 TCONS_00005218 TCONS_00005220 TCONS_00005222 TCONS_00005223 1 XLOC_001205 Coding TCONS_00005222 XLOC_001205 NonCoding Coding CLSTN2 1:129956677-130110707 j TSS2583 2421 5 TCONS_00005222_3 61 0.0846757538207352 2 0.984295165196164 0.000529445666852587 0.000741343319982869 0.000424040753678128 2.12882916474339e-14 2.34000404715246e-137 0.000289129066246675 7.61814621449798e-37 2.89934737693473e-40 7.33882352206956e-05 8.81573284399478e-05 7.79192140662937e-06 1.63687834602612e-06 5.48472193876524e-05 2.85668579923943e-05 1.87178743768106e-05 7.26945260008373e-17 0 0 1.42740881104528e-33 0.000622023955135414 2.43308079810756e-07 0 0 0 0 0.000135878551034031 0.000162389914447512 6.80267965359124e-10 7.25684629013126e-07 0.000553391678276592 XM_005201877.1 CLSTN2 PREDICTED: Bos taurus calsyntenin 2 (CLSTN2), transcript variant 0.0 1144 100.00 0.261462205700124 NM_022131.2 CLSTN2 Homo sapiens calsyntenin 2 (CLSTN2), mRNA. 5e-85 320 83.83 0.12061131763734 0 noncoding 1 1 1 1 -0.145931844116963 0.279386193224819 0.0115617651308259 0.848648601363614 GGGAACTAGCCAAATGGTCTTAGAAAGCTCAATAGAATGACAGTAGGTCAGTAAAGTAAGTTTATTTATTAGAAAATGAAGGGGAAGCAGATATATAATTGGATGGAGCATGAAGTTGTTGTTTAGTCACTAAGTTGTGTCAGACTCTTTTGTGACCCCACGGACTGTAGCCTGCTAGGCCCCTCTGAACATGAGATTTCCCAGGCAAGAATACTGGAGTTGTTTGCCATTCTCTTCTCCAGGTGAGCTTCTCCACCCAGGGATAGAACTGGCGTCTCCTGCGCTAGCAGGCGGATTCTTTACCACTGAGCCAACCTGGGAAGCCCTGGGTGTAGCATAAATGGAAGAAAATGAGACACGTCTATATTTTTCCTCTATTTGCTGGCCTCCCTGATTTTGCTTGGGTCAGCTTTTCCTTCTTCTGCACGCCATTCTTTCTGGATTCCGACACCAAGTCTGGAAAGGGCAAGAACCTAGTGTGGGCCTGAGGGATTTTTTAGCCCTTTGACCTTGGACAAGGAAGTTTGCTCCATTTACTCCTGTATGAAAGGAGAGTAACAGCACAGACATGGGTTGTGCAGGTTAAAGGAGATGTGCAGGTGAAGCACCCTTCCTGGGTTGAGGCTTTCTGTAGCCAGTGTGATTCATGGCTGCACTCCAAGCACCTCTCAGTGCCTGGAAATGCAGAAGAGTCCACCCGCACAATGGCAGTAGCTCTGGGTGAGCTGCCAGGCTGGGTGCAGAGTGACTGAACAGCAGGAGAGCTGTTAATGGATTTTATGGCTTTGTTGAGTACCCCAAACTACAGTTATTAATTATAGGATGCTGTTTAGACACCGTTGCAGCATATACATTTTGTTAATTGATTTGTATAGGCTCATATCTAGCAACATAATGTGCCTACCACAAAGCATAGTAATTGCCTTTTACTGCCTTTTTTGGCTTCTCACAGGAACAAAGACTTTAAAGAGAGGACAGACAACTCTCCTGGGTCTTTGGATGGTCTAATGTCTAATTTAGTGTCCAGTGGCAGGGTGACATTACCTGTCTAGGTGCTCAGTAAAAGGGATGAATCAATGAATAAATAACTTTTGGTTCTCTCTGGATTTCTCTACGTCCTTATTTGAACCCTGACTTGTGTGTGATATTGGCACTGCACACATGTATGCGAATATGGTCAAGGATTTATTGTGAGCCATTAATTAGTGTTTATGGAGTACCTCTTTGAAACCTCTGTGGCCTGGGGTTGGGGAGGGTCGTCAGGAGTGCATGGCCCTTGCACTCTGGGATCTGACAATTACGAGGTGTTACCAAGCATGACGTCAGGTGGCCAGGTCTTAAGATACGTGCAGTGAAACAGAAAGGTGGTAACTTCTTGCCTTGCCACCATACTGCAGCGAAGTTTCTGTCCCACTGTAGCCTCGGCAGGCCCAGCGCCCCAAGTCTGCCTTCTGTGATCTGGTCCATCAGCCTCCAGGAGCCTTGGCTGTCCCTGCATCTCCAAGATGGTGCGGACTCCGGCCACTGCCCTTCCGGTCCGCGGTGATGCACACGGCCCCGCAACTCCGACCAGCGCTCGCAGCACTCGCGCTCTCCAACTCTAGCGTGGGCCGGGCGCCCTCCCCAGACCAGGCGGCATAGAACGTCCAGAGTTCCGGCCACGGGCAGGACTGGCAGCAACGCCCCCGCTTCTCTTGGAGCGGATGTCAGCTTCAAGGGCGTGGCGGGGCCCGGCGCCCTGAGTCCCCGCGGGCGACGCTCAGGCTCCCGGGAACCACTTCTGAGGGAGCCAGTCATCCCTTTAGGCAGTTATTTGCGAGCCGGAGCGAGAAGGGTGCACGGCCAGAGGGCTCCCCGCAGCCGCCCACCTGGCCCTCTGGGAGCCGAGTCCTGCCTGGAGCAGGAAAACTGGAGCTGGAGCGCCCCGAGAGCTCGAGGACGGCGGGCAAAGTTGGGGGCCGGGGCCGCGGAGCCGCGAGCTCACGGCCGCTGCCGGTGTCCGCGCCTCATGAATATGCAGGAGCCGCCTCCCCCCGTCCGTGACGTCACGGGCCGTCCCGGGGTGAGCGCCGGAGCCGCTCCAGGTCCGTGCCAGTGAGCGCGGCTGCTGCCGGCGGGCTAGCGGCGCGGCGGTGGACACCGGAGACCGAGCGCGGCGGCTCCCAAAGCGCACCCAGCGGCAGGGCGAGGCGGCCCGCGGCCCGGCGCGCACCGGGAGGGGAGAGTCGGTGCGGGGAATAGGCGGCGGCGGCAGCTCTGAGGCGGCGGCGGCGGCGAGGATGCTGACTGGAAGGCTGTGCTGGGTGCCGCTCCTGCTGGCGCTGGGCGTGGGGAGCGGCAGCGGCGGCGGGGAGAGCGGGCGGCGCCGCCTCCTCGCGGCTAAAGTGGAGGGGGCTGTGAACTACTCCATAGGATCGAATG EMBV3_38035 CCATCTTGGGGATCACCAGGGCCGTGCAACCCTGAACTCAGAGGACCCTTTACAGACTTA Gene BVV0102_086605 + 0 NULL GK000005.2:103971314-103987748 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196180 TCONS_00196181 1 XLOC_118260 Coding TCONS_00196181 XLOC_118260 Coding Coding LOC100848839 5:103972414-103986748 = TSS146036 2390 1 TCONS_00196181_6 661 16 0.834368241121887 2.83902364400758e-06 0 1.15855894854641e-05 0 0 0 0 8.8567130864413e-06 1.15243360001285e-05 0.000218635424108773 3.9057325735939e-06 5.47576812385562e-06 0 0 1.61338840527144e-06 0.00170027552804593 3.46422775482393e-06 3.56240594281749e-05 0 3.001040646974e-06 2.53372471263393e-06 1.03270591515528e-05 1.26797234928242e-05 0.000813678294821515 0 0 1.22254888918113e-05 1.43075632488096e-05 7.2715253378669e-06 9.39300866777725e-06 XM_003586141.2 LEPREL2 PREDICTED: Bos taurus leprecan-like 2 (LEPREL2), mRNA. 0.0 4213 99.12 0.99581589958159 NM_014262.4 LEPREL2 Homo sapiens leprecan-like 2 (LEPREL2), mRNA. 0.0 2417 85.77 0.876150627615063 TCONS_00196181_6 sp|Q8IVL6|P3H3_HUMAN P3H3_HUMAN Prolyl 3-hydroxylase 3; 0.0 1076 88.47 0.925869894099849 1 coding 0 0 0 0 -0.0868798746736712 0.622544129766041 -0.0395941360173349 0.423441942126039 ATGCTCCGGCCCCTCCGGTGGCTGCTGCTCCTGTTGCTCCTGCCTCCCCCGGGGTCCCCCGAGCCCCCCGGCCTGGCCCCGCCGTCCCCAGGGGCGCCTCCCCAGGCCCCCGACTTGCTCTACNNNNNNNNNNNNNNNNNNNNNCGCGCCGAGTGCCTGACCCAGTGCGGGGCGCGGAGGCTGGGCCCCGGGGGCGCGGCGCGGCTCCGGGTGGGGAGCGCGGTCCGGGACGCCTTCCGCCGGCGGGAGCCCTACAACTACCTGCAGAGGGCTTACTACCAGCTGAAGAAGCTGGACTTGGCAGCAGCCGCTGCGCATACCTTCTTTGTGGCAAACCCAGCACACCTGCAGATGCGGGAGGACATGGCTAAGTACAGACGGATGTCAGGGGTTAGGCCCCAGAGCTTCCGGGACCTGGAGACGCCCCCATATTGGGCAGCCTTTGACACCGGCCTGGAACATCTTGGGCGCCAGGAGGCAGGCCTGGCACTGCCCTGGCTGGAGGAGGCCCTGCAGGAGAGCCTGGCCCAGGTGGAGAGCTGCCGGGCTGGCTGTGAGGGGCCGGAGGAACAGGAGAGGGAGGCAGAGGAGGAGGAGGGGACCGGGAGCCAGGGGGGCCTGTATGAGGCCATCGCAGGGCACTGGACCCGTGTCCTGCAATGCCGGCAGCGCTGTGTGGGGGATGTGGCCACGCGTCCTGGTCGCAGCCTCCCTGTTCCGGACTTCCTTCCCACCCAGCTGAGGCGGCTGCACGAGGCCCACGCTCAGGTGGGGAATCTGTCCCAGGCTATGGAGAATGTCCTGAGCTTCCTGCTCTTCTACCCAGAGGATGAGGCTGCCAAGACAGCTCTGGACCGGTACCAGGCCCAGCTGGGGGAGCCAAGACCTGGCCTCGGGCCCAGAGAGGACATCCAGCGCTTCGTCCTTCGATCCCTGGGGGAGAAGAGACAGCTGTACTATGCTGTGGAGCACCTGGGGGCCAGCTTCAAGGATCCCGACCCCTGGACCCCAGCTGCCTTCATCCCTGAGGCCCTCAGAGAAAAGCTCAGAGAGGATCAGGAGAAGAGGCCGTGGGACGATGAGCCTCCACAACCGAAGCCCCTGACTCACTGGAAGGATGTCCTCCTCATGGAGGGAGTAACCCTGACCCAGGACGCGAGGCAGCTGAACGGGTCGGAGCGAGCCGTGCTGGACGGGCTGCTCACCCCGGCCGAGTGTGGGGTGCTGCTGCAGCTGGCCAAGGATGCAGCTGAGGCTGGAGCCAGGTCTGGCTATCGGGGTCGCCGCTCCCCACACACCCCCCACGAACGCTTTGAGGGGCTCACGGTGCTCAAGGCCGCACAGCTGGCCCGGGCTGGGGCGGTGGGCAGTCAGGGTGCCCAGCTGCTCCTGGAGGTGAGCGAGCGGGTGCGGAGCCTAACCCAGGCCTACTTCTCCCCCGACCGGCCCCTGCATCTCTCCTTCACCCACCTGGTGTGCCGGAGCGCCATAGAAGGGGAGCAGGCGCAGCGCATGGACCTGAGCCACCCGGTGCACGCCGACAACTGTGTCCTGGATCCTGACACCGGGGAGTGCTGGCGGGAGCCCCCAGCCTACACCTACCGAGACTACAGTGGACTCCTCTACCTCAACGATGACTTCCAGGGCGGGGACCTGTTCTTCACGGAGCCCAACGCCCTCACAGTCACGGCACAGGTTCGTCCTCGCTGCGGCCGCCTCGTGGCCTTCAGCTCAGGCGTGGAGAATCCCCACGGTGTGTGGGCCGTGACACGCGGGCGGCGCTGTGCCCTGGCACTGTGGCACACCTGGGCCCCTGAGCACAGGGAGCAGGAGTGGATGGAAGCCAAAGAGCTGCTGCGGGGGCCAGAGAAGGATGAAGGAGAAGATGTGGCCAGCAGGGACCCCGGCCCAGAACCCCCCAGCCGCAGGCTTCCGCGGCTCCAGGACAAGGCTGGGAAGCCGCCTCGCATTCGAGAGGAGTTGTGAGGGGGCTGGCCCAGATCCTTGGGGATATGGCCACTTGACTTGTGGAGGGTCTGCCTTAATGCCGGGGACCTCTGGGAAGCCCCCGTGTGACCACCGCAGTACAGCGAGCCCTCCATCCCTGTACCCTGCCATCTTGGGGATCACCAGGGCCGTGCAACCCTGAACTCAGAGGACCCTTTACAGACTTAGCCTGGGGACTGGCCTGGGGACTGGCCTGGGCCCAGCCAGGATGGACCTCCAGGCCTAGGACAGACAGAAGATGGGCAAGGCCGAAGTGGAAAGAACTGGCAGGGGGTAGGGCCCGAGCGGGTGCTGTAAATGAGGAAGATGAGAGAGAGGGTCGCCCCCGCCTGCCTTCCTCAGCCTGTCAATAAAGATCCTGACCATCCCTCTGCTGGGGCCAG EMBV3_04391 AGCACAACTATACTGATGCCCAAGGCAAGTGGTTCTGCTCACCCTCGGCTTCTAAAGCAG Gene GeneID:782118|BOSTAUV1R433:XM_002695465:156_cdna Constitutive 0 NULL GeneID:782118 18 GENE BOSTAUV1R433 NULL vomeronasal 1 receptor bosTauV1R433 EMBV3_41151 GAAGCTGGTGCAGGTAGAGGAGGCCATCAAGATCTTTTCCCGCCCCAAAGTCTTTGTGAA Gene GeneID:524652|C18H16orf48:NM_001035350:297_cdna Constitutive 4 NULL GeneID:524652 18 GENE C18H16orf48 C16orf48 MGC127802 chromosome 16 open reading frame 48 ortholog EMBV3_42820 CGTCAGCGTCTGGGAAATGGGCTCTGATGGGAGGAGGTGAAGGATTTCTGTGTAAAGGAA Gene GeneID:514958|TH1L:XM_002692414:377_cdna Constitutive 0 NULL GeneID:514958 13 GENE TH1L NULL TH1-like (Drosophila) EMBV3_21111 CCTTAAAAGACTGGGAATTATGCTAGAAGGTCGTGGGCACTAAAGAAAGAAAGGGAGAGA Gene GeneID:506721|PITX2:NM_001097991:32_cdna Constitutive 0 NULL GeneID:506721 6 GENE PITX2 NULL paired-like homeodomain 2 EMBV3_19241 AGCATCCCCAAAACCACCCAGAAGCCTTCCAAAGAGCAGATGCTAAATTGATATTTGAAC Gene BVT0102_322749 + 0 NULL GK000030.2:118706594-118800901 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253787 TCONS_00253788 TCONS_00245588 3 XLOC_156725 XLOC_156726 XLOC_150763 Coding TCONS_00245588 XLOC_150763 Coding Coding - X:118952362-118956507 - TSS184317 4145 3 TCONS_00245588_1 77 0.327382388419783 1 0 0.000970997735066287 0.000555216706564837 0.000525502270716444 0.000428859840490059 0.000683317864551417 0.000335390840071729 0.000320243228834991 0.000270802251720063 0.000419707926607864 4.13600312614471e-06 1.7830647721482e-05 9.89596065072636e-06 2.94964905219733e-05 5.19627774898513e-05 2.48080345012972e-05 2.82391890915881e-05 0 0 0.000936953075508277 0.000704674436863543 0.00028046116172402 1.70959485937966e-06 9.83679587798153e-07 0 0.00051370419112426 0.000755362074721785 0.000259906430371612 0 2.69131165828079e-06 3.10724942041851e-11 NM_001075135.1 UBE2D3 Bos taurus ubiquitin-conjugating enzyme E2D 3 (UBE2D3), mRNA. 3e-90 338 84.69 0.0735826296743064 NM_181888.3 UBE2D3 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), 3e-97 361 78.62 0.106151990349819 TCONS_00245588_6 sp|O15480|MAGB3_HUMAN MAGB3_HUMAN Melanoma-associated antigen B3; 3e-07 46.6 66.67 0.551724137931034 0 noncoding 0 0 0 0 -1.16109109614262 0.0477367021743026 0.0271494058541114 0.698876587267788 CTTTAGGGAAATGAACTGTCACAGAGAATAAACTGCCTTGATATGTATGGGTTGCCATTCTTTTCCGTAATTGTGATTTGCCCATGAAATGTATCATCCCCAACTGGACCTGCAGAATATTGTGCTGGAGGGTCCCTGGCGACATCACTAAGTTCCTTATTAATCCATTTCAGTGCCACCATCTGTGCTTTTTGTCTGACTCCTCACTGTCTCAGTGTGTACTCAAAGGTCCGGCCAAAACTCCTGATTATCTGGTGGCTGGGAAGGACTATCTCTTCATCTCACACTGGCTCTGCCAGGCACAGGTCCCTTCTTAATAAACAGAGAGGTTGGACTGGGGTGGGGTCACTGGCAGAGAGTAGATGAGGCTGGAGGGGAAGGGGAAACAAGCAGTGCAAACCCTTAGACTCAGACAAGCATCGAGTACCTGACGGAGACCATCCAAATTAGTGGCTTCTTTTTTATTTTTTTTTTTTCAGATATACAACCAGGAGTGCGATTGCTGGGTCATGTGTTAGTTCTCTTTTTAGATTTTGAGCACGCTCCTTACTGTTATCCATGGTGGCTGCACCAATTGATATTCCCACCAACAGTGTATAGATCTTGTCCACATGCTCACCAACATTTGTTACTTCTGTTCCTTTTGAATGATAGCCCTTCTGATAGGTATAAGATAATACCTCATTGTGGTTTAAATTTGCATTCATAGGACGATTAACGATGTTGAACATCATTTCATGTGCCTCTCAGCTATTTGTATGTCTTCTTTGGAAAAATGTGCATTTAAGTCTTCCGCCCATCTTTTTCTTGATTTTTTTTAGACTGTTATATCAACTGTTTATATATTTTGGATATTAACCCCTTATTGCTTACATCATTGGCAAATATTTTATCCGATATAATAGGTTGGCTTTTCATTTTGTTGATGGTTTCCTTTGCTGTGCAAAAGCTTTTAACTTTAATTACAACACATTTATTTACTTTTGCTTTTATTTCCCTAGCTTTCAGAGACAGATCCAAACAAATATTGTTATGATTTATGTCAAAGAGTGTTCTGCTCATATTATCTTCTAAGAGTTTTATGGTTTTCACTCTTATAGCTAAGTCTTTAATCCCTTTTCTGTTTACTTTTGTATATAGTGTTAGAGAATATACTGATCTCATTCTTTGAGAGCTACATATCAAAGAATGAGATTAGAGTGTAAATACAATTTGGTAGTCAGAAAATTAAATGTTCTTTTATATTTGAGCCAGTAATTCAGTGTTTTCAGAAATTAAATCTGAAGAGACATCCACAACCATATGAAAATACATAAATGTCCATGCACATGTTAATTGAGGGAACATGATATATGCACAGAGTGGAGTACTACAAAGCTATAAAAAGGAATGAGTACAATTTTGTAAACTAATATGGAGTGCTTCCATGATAGATATAGATATATAAAAGAATGTGGGAGTTTGGGGCTAATGTCAATGATACCAAGTCAAGTGCCTTCCCATTCTGGTATGAAGAGGCTTTGAGAGCTGAAGAAGACAGAGCCAGAGCCAGAGCTGCAGCCAGGGCTCCTATGGTGCCAGGGCCAGTGCACTTTCCTGAGCATGTCCAAATTTCCTCCCACCCCTAGTGAAGTCTGAGCAGATATTTCACATTGCATTTCAAGAAAGCAGGCAAACTTCCCACTAGTGGAGGGCCACGGTGGGGCTCATGGAAATTCAGCGTATAAGGTATTTATTTGTGTTCCAATACAATATGCACAAATTGGAGGTTTTTCTTTTTTCTGTTTTTAAATATTGTTCCTTTTAATTAAAGATGTGTTTAGCTTCAGATTCCAAGTACACTAATGGCACACCTCTGACATGTACTGCAGATTATCAAGTTGAAAACTAAGAAATTTCGTATTACATAGCACAGACTGAAATCCTTGAATCATTTCTTGTCATTCGGAACAAGATAACATGATATTGCAATATGGATTTTTTTTGTGAAAATGGAAATTTTTCCACAGTGAAGTCTGTGTGATTATCAGATACAGAAAAAAATTTTAAGAAGTATTCATTTCTTCGTCTGTTTTATTTGTTTAGTCTTTCTTTGTAATATTGAAGTTTATTTACCTGGATTGGCTTCGCTTATTTAAGAATGTGGAAGAAGTGAAATCCCAGTAACATTGCTTTCTTGCACACTTGCACTATAGTTGTTCAAATATCAATTTAGCATCTGCTCTTTGGAAGGCTTCTGGGTGGTTTTGGGGATGCTAAGAAAAATAAACTCAACCCCTTCTTATAGAATTCTAGTGTCTAAGAGCAGCATTCATCTAAAGTAGCTGGTGAACTGAGATCTAGGGGCCTGATAAAAATGAGGTGTAAGGAGGTGAGGGGATTGAGGGCTTCCTCATGAGGAGTCTAGTGTAAATACAGTGAGGCAAGGCACTTGGAGACTTTAGGACAATAAAAGTCTGGCAGTGGAAGGTAGTTTTAAGTTAGGCTACAGGGCGAGCCCACCAGGGAGGCTGTGGAAACACTGAATAGGGGTCAGACCCTCAGATGGCGGGTCTCAAAGTTGAGAGACTTAAGCCTGGAATGGAAAACTACCCCGAACAATTGCTTTGGAATTATGGGGCTTCCCAGGTGGCTCAGTTGTAAGGAACCCGCCTGCCAATGCAGGAGACATGGGTTCAATCCCTGGGTCAGGAAGCTGCCCCTGGAGGAGGAAATGGCTACCCAATCCAGTATTTTTGCCTGGAGAATCCCATGGACAGAGCAATCTGTTCAGTCCATGGGGTAGAAAAGGGTCAGATACCACCGAGTGACTAAACAGCAACACAAGTAGACCAGAGAGAAATCCCCCTAGGGAGGGGATGGAATGTGCCCTGTGCTCCTGTCCCAGTGCCCGTGAACACAGTGCACAACCTAGATGTTTCATGCATATCATCTCCAAGGAGATTCTGTGAAATAAAAGTAATAGTAGAATGAAACCGGAAACTCAGAAGCTAGTGGGCTAACACTCTTTGCTGTGAGTCGTGGAAACAGAGCTCATTTTATTGAAAGGGCATTCCATTCAGCGTTTTTGGCTACGTTGATAATTCCACCAAAGTCTATGAGGTGAGTCTATTTTAGGTGATGGTGAAATTGATGAAGATGCGGGCTTATTTTATTTAGTTACTTATGTATTTGGCTATGCTTGGTCTTACCTTTGGCACGCAGGATCCTTGATCTTCCTTGCAGCCTGCGAGTTCTTTAGTTGCAGCATGAGGAATGTTTCAGTTGTGGCATATAGGATCTTTAGGTGTGGCTTGTGAACTGTTAGTTGCGGCAAAGCTGTGGCATGTGGGACCTAGTTCCCTGATCAGCAGTGGAACCCGGGCCTCCTGCATTGGGAGTGCAGAGTCTTAACCCCTGGACCACTAAGGAAGTCTCTAGGAGTTGTTCAGATGAAAGAGCAGCCGGGAAGGAAGACAGAATTAGTCTCAGAATCAAATTTAGATTCTTCGAGTTTCATTCAGTTAAAAACATACCCCCACACTCAAAATACGATCTAGTAGTGGAAATGAAAGATTCTTTCTAAACAGCATTTTGGACTGATTTGGTGTTCCATGTGCTAGAATGCCACAGATTCTCTGACATCTCCTGGATTTAAAAGATTCCTCAGGGTCGGTGGTATCCTCCAGGATGAAACTATTCATAATCATAGTAAAAACAGATATTGTGTAAAGTCTCAGTGTGGTCCAGGCAGTGTGCCAGGTGCTTTAGCTACATGCCACTAGCCCTACAAAAGCCACTTCACCTGAGGCTCCCCGAGTTTGGGGATGGACCCAAGTCCACACAACTGATATGAGGCAGAGCTGGGACTAGAGCGCTGGTCTGAATTTAACCACAGCATGTACCCTTCCACTTGTCCCGATCTGAGGTGCTCATGAGTCAGTTAATTCACTGTCTTCTAGCACTTCAACATGTATCTTGAGTGACAGAAAGAAGGACTCTGTGATGAAAACACTGGGATGAAATACATAGCCAAGGCAATATAAACACCATAATAATTAAGAGGTGTGAATAAAGGGGAGAAGGGGGTAATGCTCAGTTAGCATATGATCACCTGCATGTGCAATTCAAACACCCTCAAGTGATCGAGGGCTTACAAGATTATC TCONS_00245587 s 3' 38366 TCONS_00245587 s 3' 38366 EMBV3_20053 CCCTAAAGAAAGCCTGAAATATCAGTTTCTTCCTACACTTACTGCATATCCTAGTATACC Gene GeneID:533664|AP1AR:NM_001081532:65_cdna Constitutive 3 NULL GeneID:533664 6 GENE AP1AR MGC155012 adaptor-related protein complex 1 associated regulatory protein EMBV3_14698 TGAAGATCAAGTAAAAGAAGACATGAAGCTCACTACCAGCACAGTGGCTCACCCTAAGCC Gene GeneID:787476|LOC787476:XR_084119:32_cdna Constitutive 0 NULL GeneID:787476 X PSEUDO LOC787476 NULL hypothetical LOC787476 EMBV3_27228 ACCTATGGTCTGAAGGACCCACAACTGGAAGGAGGAATGTTAAGGTTGCAAAGTATTGGC Gene BVV0101_058394 + 1 EMBV3_16471 GK000004.2:82024335-82104332 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13210 CCTCGACTTTGACCTTCTTGGGAAAGCCAGACTACAATTAACTGAGCTCCTCCCTGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42428 TGCAAGAAACTCAAGTCTGAAAGTCCTGAAGCTGTCTAACAACCACATCAGCTCCCTAGG Gene GeneID:444867|NOD2:NM_001002889:93_cdna UTR3_Alt 2 NULL GeneID:444867 18 GENE NOD2 CARD15 nucleotide-binding oligomerization domain containing 2 EMBV3_02543 TGACGCCCGCCCCTATCCTTGCCCACACTGCCCCAAGGCTTTTTCATTCCCCTCCAAATT Gene GeneID:504571|ZNF575:NM_001040503:115_cdna Constitutive 0 NULL GeneID:504571 18 GENE ZNF575 MGC134311 zinc finger protein 575 EMBV3_40112 GGAGACATGCTATAGTGATAACAGCAGGAGTCTTCCACCGGAAAGATCTGGACCCAAACC Gene BVV0102_098013 + 0 NULL GK000005.2:83923317-83984990 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36483 AGAAGTTCAGCATCGGGAACGCCTTATCTCTGTTGATGGCTGGATCTATTTTCAGGCACC Gene GeneID:512470|DHX29:XM_002696328:10_cdna Constitutive 0 NULL GeneID:512470 20 GENE DHX29 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 29 EMBV3_06091 TGCCGGAGACGTGAGGAAGAGCCGGCACCGAGCTGTGCTGCCATCATGCCTCGAACCCGC Variant GeneID:515301|CDC6:XM_002695965:291_cdna 92^203 1 EMBV3_28249 GeneID:515301 19 GENE CDC6 NULL cell division cycle 6 homolog (S. cerevisiae) EMBV3_19778 GGCTGGCCCTTTGGAAGGTGCTTTCAACAGCAAGAAGTCCACAGACCACCCCAAGTATTC Variant GeneID:617975|H1F0:NM_001076487:109_cdna 236^310 1 EMBV3_18160 GeneID:617975 5 GENE H1F0 MGC139771 H1 histone family, member 0 EMBV3_23265 GGAGCCTGGCAGACAATGAGGCATGATGTTGCAGAGTCGGATACAACTGAGCTACTAACA Gene BVV0101_072393 + 1 EMBV3_32455 GK000011.2:98561577-98567330 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07078 TGCCTCAGGGCACTTGGAATGACCCTCAGCAGTACAGTTGACACAAGCATTGATCCTTCT Gene BVT0102_348357 + 0 NULL GK000004.2:66643766-66696648 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22907 GCACAACAGGTGTGAAATAGAATTTATTGTGGCTCTGATTATGTACATGTGAGATGTGCC Gene GeneID:532772|LTBP3:XM_002699343:216_cdna Constitutive 2 NULL GeneID:532772 29 GENE LTBP3 LTBP2 latent transforming growth factor beta binding protein 3 EMBV3_13544 TGAATGACGAGATTTTCCCCACCCCCACTTGCTACCCTTTTGTGTTGCTGAAAGAGGAGC Gene GeneID:524966|STARD7:NM_001102086:71_cdna Constitutive 2 NULL GeneID:524966 11 GENE STARD7 MGC140163 StAR-related lipid transfer (START) domain containing 7 EMBV3_41537 TGCATGGGTTGCAGTAATCAGTGTTTAAAGGATTCAGTTTCATTGCTGACGTACTTTACC Gene GeneID:536811|JPH1:XM_002692704:112_cdna Constitutive 2 NULL GeneID:536811 14 GENE JPH1 NULL junctophilin 1 EMBV3_36437 CCAAATATGGTTCCATTCCTAAACTTATATGCACTATTCTCAGAGGTCAAAATATGACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06959 AGCACCTGGCTCTTTTAGACTCTATGGTTGAAGGGCAGGTGGATAGATGCAGCTTGCTTA Gene GeneID:100299267|LOC100299267:XM_002694806:654_cdna Constitutive 1 NULL GeneID:100299267 18 GENE LOC100299267 NULL similar to pyruvate dehydrogenase phosphatase EMBV3_41494 TACCAGATGGCAGATTCCTGTTCTGGTTGTCAGTCCCGCAGTGTGATCAGGGTAGGTAGA Gene GeneID:512684|ZNF547:NM_001105360:37_cdna Constitutive 1 NULL GeneID:512684 18 GENE ZNF547 MGC151585 ZNF551 zinc finger protein 547 EMBV3_06118 AGTTTCTCAGATGTCTGTGTTGATGGCCACAATTATTATTCTCTGTAACAACTGTAGTGC Gene GeneID:540872|TRM1L:NM_001098121:102_cdna Constitutive 2 NULL GeneID:540872 16 GENE TRM1L MGC148834 TRM1-like protein EMBV3_16680 CAGCTGTCTGCCAGTCTCCCTGCTTAAATGGTGGAAAATGCGTAAGACCAAACCGATGCC Gene GeneID:781282|SVEP1:XM_002689921:54_cdna Constitutive 0 NULL GeneID:781282 8 GENE SVEP1 NULL sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 EMBV3_18212 TTCACAAAGGGCTGGGTGACGCCTATGTGGAGGTGTCTGAAAACAGCGAGTCGTGGGAGC Gene GeneID:512451|ZHX3:XM_002692464:515_cdna Constitutive 0 NULL GeneID:512451 13 GENE ZHX3 NULL zinc fingers and homeoboxes 3 EMBV3_16703 TCTACTCCCCTCACAGATGTCCTGAAGATGATTTTGTCACGTCCACGGATGCCCACCACT Gene BVT0101_046317 + 0 NULL GK000005.2:115851140-116021729 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40312 TGCAGGTTCTGCTCCAGGAACATGAATTGGGCGGCCGCCGTGTGCTGGGCTCTGCTGCTA Gene GeneID:616266|SPRN:NM_001080321:234_cdna Constitutive 0 NULL GeneID:616266 26 GENE SPRN NULL shadow of prion protein homolog (zebrafish) EMBV3_39333 CCTTGCTGAAAGCTGGAAGGGTTAGAGGGTCTTTTGCTCCATGTCCAGATTCACATACGT Gene GeneID:522464|UBR1:XM_002690813:46_cdna Constitutive 0 NULL GeneID:522464 10 GENE UBR1 NULL ubiquitin protein ligase E3 component n-recognin 1 EMBV3_36622 CATTTCATTACATCGGAGTTGGTCACTGAGAAAAACCTGGAAATTGAACTCCTAAGCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29433 CTGTATACAGATTCTGGAACAGAGACATTAGAAGGAACTGACTGGTGAAAAGATGTCTCT Gene GeneID:614382|NFYB:NM_001079786:58_cdna Constitutive 0 NULL GeneID:614382 5 GENE NFYB NULL nuclear transcription factor Y, beta EMBV3_33114 GGAGACTCACAGACATCAAAACCAACTTACGGTTACCAAAGAGGAAGTGGGGTAAAGAGG Gene GeneID:515679|LOC515679:XM_002689478:11_cdna Constitutive 0 NULL GeneID:515679 8 GENE LOC515679 NULL similar to Uncharacterized protein C8orf80 EMBV3_13676 CCTTGCCAGGCTATGGCAGACAGAAACTACCATTACAATACTAAAACTCTAGCGAGTCAG Gene GeneID:614959|SEL1L:XM_002691105:14_cdna Constitutive 2 NULL GeneID:614959 10 GENE SEL1L NULL sel-1 suppressor of lin-12-like (C. elegans) EMBV3_06654 TCTGGAGAGTTGAGACATAAACCCATGTACTTATAGTCAATAATCTATGACAGAAAGGGC Gene BVV0102_131965 + 0 NULL GK000003.2:85975563-86172419 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30863 GCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTCCTTATTAGGCCG Gene GeneID:337888|RPS15A:NM_001037443:303_cdna Constitutive 0 NULL GeneID:337888 25 GENE RPS15A MGC133517 ribosomal protein S15A EMBV3_38166 CTCCAGTTCTGGCTTCTTGCCAAATCCCTACCTTTATCCCACAACCCTTCAGATTTTATA Gene GeneID:404126|HDAC1:NM_001037444:52_cdna Constitutive 0 NULL GeneID:404126 2 GENE HDAC1 MGC127235 histone deacetylase 1 EMBV3_27068 CCCCTTGCTAACATTTTCAGCTTCGCTTGTCTCACACTGTATGCCGCACTAATCCCAGCT Gene BVT0102_397599 - 1 EMBV3_30432 GK000003.2:94575371-94580544 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00179346 1 XLOC_109119 NonCoding TCONS_00179346 XLOC_109119 NonCoding NonCoding - 3:94578815-94579721 - TSS134105 906 1 TCONS_00179346_1 97 0.131346578366446 1 0 0 0 0 9.1657320997275e-06 0.000147134486765704 0 0 0 0 0 0 0 0 0 0 5.83037567358749e-05 0.000109948997130025 2.7694153703437e-05 0 0 0 4.09529597366793e-05 0.00134674158384054 1.85040213252925e-05 0 0 0 1.06017458845958e-05 0 0 XM_588670.6 CC2D1B PREDICTED: Bos taurus coiled-coil and C2 domain containing 1B (CC2D1B), mRNA. 9e-33 145 100.00 0.08719646799117 NM_032449.2 CC2D1B Homo sapiens coiled-coil and C2 domain containing 1B (CC2D1B), 3e-20 104 77.54 0.15121412803532 0 noncoding TCACGTGTTAGGGCGCGAGGCGTCTCCCGCCGGGGCGCTTCCTGTCACGGCTGCCTCGGCGGCCCGGGGGCCGCGGGAGGCCTGGGCGGTACCGGGAGGGAGAAGGCCCGGGTCGGTATCGGATCCGCCGCGAGGTATGCCGCGAACCCGCCCTCTGGCGAGGGAAGAGGAGGGGACGGCGGGGGAGATGGAGGCGGCCGGGCAGGGCTGGGCAGGGCGGCGCGTCCTGCCGCGGGAGTGGGGTTCCCGGCTTCGCCTCCCCTGCGCACTCCCTGCCCTCCTCTCTCCAGAGCCTGCGTCTGGGTCCAGCACCACTGCTCCCAGTCGGGTGCCCCCGGAGCCGCAGACTTGGCGGGTCTCGCCGACCCACTCACTTCGTGTCCCCCGTTCAGTTGACCACCCGCCGTACACCCAAGCCACTGAAATCTGATGCCTTGGAGTCACTCTGAGCGCCTCCTCCAGTGCGCGCACAGCCAGTTAATCTCCGAGTCCTGCTGGTGGTACCCCTCTAACTGTGGAGTCGGTCCACTTCTCTCCCTCCCCAACACGGCCCCCACGGTCCCTCAGCCTCTCCCCTTTTCGCCGGGACCGATTCACGATCCTCGGTGTTGAGACGGCTTCCAGCCTGCGTCCTCCCTCCTTCCGTCCTTTCTGCAGCCAGGGGGCATGTTTCTGAATCGCCGACTTCATCCCCTCAAGTCCTTTGCCTTCAGAACCGTGCCCAAACTGCTTTAGGCTTCAGAGTTTTTCTCATTTGCCCCTTGCTAACCTTTTCAGCTTCGCTTGTCTCACACTGTATGCCGCACTAATCCCAGCTTAGTTTCCCTGTGCAAGTCAAGCTATTGTCACCTCAGAACCATTATCAGGTTGTTCCCTATGTTTGGAATCCTATTCCCCTTCCTCCCC TCONS_00170762 . 5' 809 TCONS_00170762 . 5' 809 EMBV3_05808 TGTGCTGGAGCCACACACCCAAGCCACCCTATTACCTCCAATATTCCAGGGCCTTCTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37728 GAAAAGGAAGTTGTAGAGTGAGGGGTATGCTTCATGTTCTTCCATTCATTTACCTAACAG Gene GeneID:100125225|SLC17A6:NM_001103110:10_cdna Constitutive 2 NULL GeneID:100125225 29 GENE SLC17A6 MGC166269 VGluT2 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 EMBV3_41717 TCTTTAAACACCAGGAACAGCTTAAATAATTCACTCTAGGCCTGCGGGGCCCATGCGGAC Gene BVV0102_203713 - 1 EMBV3_35680 GK000012.2:80724168-80773603 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041196 1 XLOC_025003 NonCoding TCONS_00041196 XLOC_025003 NonCoding NonCoding - 12:80735308-80736083 - TSS30697 775 2 TCONS_00041196_3 74 1 0 0.000245780403740253 0 0 0 0 0 7.52478635738492e-06 0.000747925869903254 0 0 0 0 0 0 3.16528789670675e-06 0.000920143130268234 0 0 1.85056351800844e-05 0 0 0 0.000426148520859323 2.16317884830817e-05 4.46997970814063e-05 0.00012727296540067 0 0 0 0 XR_236797.1 LOC101906061 PREDICTED: Bos taurus uncharacterized LOC101906061 (LOC101906061), 2e-109 399 100.00 0.283870967741935 XR_141758.1 Gm10837 PREDICTED: Mus musculus predicted gene 10837 (Gm10837), misc_RNA. 6e-47 192 76.21 0.332903225806452 0 noncoding 0 0 0 0 -0.0484110720243536 0.692545684190861 -0.0133060818361279 0.800035486846737 CATCTTCCGGGGTCCGATCTCTCCATGGAGTCCTGAGCAACCGTGGGCCCTCAACACCGGGGGTGGGGGGGACGGGGGCAAGGCGGCCAGGAGGTCTCAAGGCCACACAATGTCCGCTCCGGGCTGCCATCGGGGCCACCGTCCAGGCCGAAACCCGGGGGAGAACGTGGCCAGAGAGGGAACCGTCCGCATGGGCCCCGCAGGCCTAGAGTGAATTATTTAAGCTGTTCCTGGTGTTTAAAGAGGTTTTGCAGTTTTTAAAGAATGTTGTAAAAAAAATATCAGCCCTTGTTAACTCCCTCATTATATGCTTTTTTCCTCCCCTCAGCTGAACAAGCCATATTTCCTGAAACAGAGGAGCTATGTTAAGTGTTTAAACATGTGTCAAGTGTCTTATAAATAATGCAAATTCATAAAGAAGGGGAGGAAATTTCACTGATACCTAAAGTACTTGGCGCAGCCACGTTTCACTTGAGTTGGGTTATTTTTGGCTGCGGAATTGTAGAAAGGAAACTGTTCGGAGATGACTGGGCACCTCCTGGAGCCCTCTCCCTTTCTTAGCCTGCTCCCTTTGAGTCTGTGCTCAATCCCGTCTAGAAATGCTTTTGTCTCCTCCACGAAAGAAAGAAGTTCAGATGCTCTGCAGAGTATGTTTGGTTCAGGGTTAATACTCAATGCAGTATTTTGGAGTCACCTTTTCTGTCTTCTCCTCTCAGCCTCCTCCTATTCAAAGTTTCTGCTGCTGTAACATTTTGCTATGACACCCTCCCACCAC TCONS_00035806 . 3' 10620 TCONS_00035806 . 3' 11394 EMBV3_07893 GGAATAATTGGGATTCCCTGATAATTCATAAGTTCATTGTGGACATTATCTTCATCCTCC Gene GeneID:100138313|FPGT:XM_002686330:117_cdna Constitutive 1 NULL GeneID:100138313 3 GENE FPGT NULL fucose-1-phosphate guanylyltransferase EMBV3_18778 AGAGGCCCCTGTTACTGGCCACATAAGAATCCGTGCAAAGAGTCAGGGAATGGCCTTAAG Gene GeneID:535533|COPB1:NM_001078007:172_cdna Constitutive 0 NULL GeneID:535533 15 GENE COPB1 MGC139703 coatomer protein complex, subunit beta 1 EMBV3_16139 GAGTAAGGAAACGCTGCATGACGGCTAGAACTTGGCCTTGGGATTACATCCTCCACTTTG Gene BVV0102_081266 + 1 EMBV3_07956 GK000024.2:34585541-34760344 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26786 CACTGAAGTTAAGAAGGTGATGGAAGAGTGTAAGAGGCTGCAGAGCGAAGTCCAGAGGCT Gene GeneID:326580|VAPB:NM_001082423:782_cdna UTR3_Alt 2 NULL GeneID:326580 13 GENE VAPB NULL VAMP (vesicle-associated membrane protein)-associated protein B and C EMBV3_02191 CCCTGTTACAGAGAGAGCGGCAGCATTTTTACCTCCAACGAGCACTTCAGATCAGTATTG Gene GeneID:535214|ZNF236:XM_002697651:52_cdna Constitutive 2 NULL GeneID:535214 24 GENE ZNF236 NULL zinc finger protein 236 EMBV3_27721 CAACCGAGTGATCAGTGGTGTGCCAGGCTGTCTCATGCCAAGAGGTTTATCTCTGGTCAA Gene BVT0102_324291 + 1 EMBV3_41764 GK000007.2:67745734-67795751 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221940 1 XLOC_135249 NonCoding TCONS_00221940 XLOC_135249 NonCoding NonCoding - 7:67751737-67753387 - TSS165938 1650 2 TCONS_00221940_2 53 1 0 0.000692652904050256 0.000669896441237663 0.00060010867987489 0.000261706011380089 6.58291191355229e-05 0.000223295086574451 0.000445330256901922 0.00116860449255902 0.000965942987772749 0.00063587644535558 4.16216782568686e-06 0 0.000205197069156818 0.000145395962508348 5.94691014161562e-06 0 0 0 0.000638865125314988 0.00124215759313067 4.04763725695881e-06 0 0 0 0.0010791617106105 0.00077713612320112 8.8774937091767e-05 0 8.82653299027373e-06 0.000287858952549202 XR_231766.1 LOC101903257 PREDICTED: Bos taurus uncharacterized LOC101903257 (LOC101903257), 0.0 652 100.00 0.218181818181818 0 noncoding 0 0 0 0 -0.0625240832580142 0.612381525168397 0.00984524197205571 0.886502307987515 GTCCTATCCCCCTTGTTTTACAGGTGGCAAAACAGACCTAGAGGACGGGGAGGCACAGCTAGAAATCGGAGACCTTGCTGCTAAAATAACCCCTTCTGGTTTATCTCCCCCACACTCTTTCCTAAAGAAAAACTAAGAGTGTGCGGTGTGTGTGTGCGTGGGGGGTGGGGGAATGAAACTCTGTCCATTCTTAGGTTTGTAACAGCCTCAAAATTACGGAATCTATTTAAGGTAAACCTGATGCTGCCCATTGTCCAATGCCTAACACAAATCAAGCTTATGGAAAAAGAATATTAAAATTTCCACGTTTTCCCTCGGGTCTGGAACCCCAGGATTCAAGGGAGAATTAAACATTTTCCTCTCCCATTCCCTTTCTCTTCCGAAGTCCGTAAATGACAACGTGTTTACACAAGTTTTTATGTCGTCTGAGCTTCGCCCCGGCCCCGCTTCCTCCTCTGTGTATGTTCCGCGCAGAGAGATGTCTGCTTCAGGACGCGTTCAACCTAAACAGAACCCCGTCTGATTGGAAAATGTATTTATTTGAAAAATCGTAACTCACAGCTTTGGTGAAAACGGCCCCCAAATTTATGGGATGGCTTGGGGCGCGGCGGTCGTAAATTAAAAAGCACTGGACAACCCCCTCCCCCAATCCCCGCAGCGGCACCAGTCAGGTTCTCAGGAGCACCCAGAGACTAGCCCCCTCCCGGCTCCACCCCGCCGCACTCTTCAGCCTCTGCTCCAATCTCTTGCTGTGGGTAAGTGGCTGTGTTAACAGGCAGGTGGATTTCATTCTGGTTCCTTTCACCCAGTCAAGTTAATTTCAGGGTAGCCTCACTGAGAACGGTTTCAGGTGGTCGGTTAACAGTGAACAGTGTTCTGTTGTGCACCCATCTGTTTTAGGCATCTCGGGTTTTCTCTTTAAGTACACGCTGGTAAATTTCGTGGTAGTGGGCTGCTTGTCCCTAGTCCCCAACCGAGTGATCAGTGGTGTGCCAGGCTGTCTCATGCCAAGAGGTTTATCTCTGGTCAGTGTCATGAAGGTCAGTTTCATCGGCGACTGCTGCTGCCCAGGTCTGGGAAATTTTTTCCTTTCAGTCCAATCTGAATTCCCCTGGAGGATGGAGTCAACACATTCCGCCTAGTTGCGCGATCCTTCAGCCAGCCTGCGCCAGCTGAGGACTAGGATTAGAGGTTGGAACTGCGAGCACGTCCTGGGGAACAGGAGCCGCGGCCGCCAGAGGTGGGGAGCCGCGTAGTCCAGGCGGAGCTGGACTCATGGGGCCTTCACTCGCAATCGTCTGCTTCCCCCTGCAAACGCCGGACTGAGCCATATCGCTCCGTCTTTTTTTTTTTTCACTAACGATCAAGCGCCACTTTGGCAGCGTACCCACGGGGAGCAAGGCAAGCTCTCCGCTCCCGGCTTGTCTGTCTAAGCGCTGCTGTCTCGGGCAAACGAGTTTAGCTACTCAAAATTTGTGCCTTTTGCGCTCGTTTCAAAGGAGCGCTCTGGAGCGCAGGAAGAGCCGCAAAGTAGTGCGGGAATCCCAGAATCCGAGGTGGTGCCGTAACTCATCCCAACCGGTTCTGCCGCGGCCACCTGCCTCGCAGCAAGCCAGTCCGCTGGCACTGATGTATACGCAGAAACGTTGG TCONS_00217556 TCONS_00217557 TCONS_00217558 TCONS_00217559 TCONS_00217560 TCONS_00217561 TCONS_00217562 TCONS_00217563 TCONS_00217564 . 5' 5999 TCONS_00217556 TCONS_00217557 TCONS_00217558 TCONS_00217559 TCONS_00217560 TCONS_00217561 TCONS_00217562 TCONS_00217563 TCONS_00217564 . 5' 5999 EMBV3_11750 GAGTACAGCTTACCCTCGGCACTCTTTATTGGCCCTGGGAAATTTTGCTTCAGTACTTTA Gene BVV0102_175387 + 0 NULL GK000014.2:375057-501544 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118488 TCONS_00121789 TCONS_00118496 TCONS_00121790 TCONS_00054131 TCONS_00121786 TCONS_00122158 TCONS_00054163 TCONS_00121788 TCONS_00122172 TCONS_00122897 TCONS_00138409 TCONS_00120354 TCONS_00121787 TCONS_00121784 TCONS_00121791 TCONS_00122202 TCONS_00121785 TCONS_00054179 11 XLOC_072644 XLOC_073484 XLOC_031940 XLOC_073713 XLOC_031972 XLOC_073727 XLOC_074451 XLOC_084617 XLOC_073146 XLOC_073757 XLOC_031988 Coding TCONS_00121784 XLOC_073484 NonCoding Coding LOC100848264 21:60875319-60880390 j TSS90637 2913 2 TCONS_00121784_8 92 0.0569859251630621 3 0.42603550295858 0.000401748248944648 2.6423463211345e-64 0.000124259963908812 0.000516044040945929 8.62304975407109e-05 0.000236909156697626 0.000172285811308061 9.25757967259125e-05 0.000145249897203945 7.48687024019666e-06 1.47900310385452e-05 2.51293638827252e-59 3.07672422908691e-05 1.42456646662037e-30 1.17420567354868e-06 0.0014103971569146 0.000580208945165322 0.00159084248854046 0.000356934319850796 0.000411614879473073 2.66286836490796e-35 0.00155907592283559 0.000460762826967629 0.00152568250823812 0.000214251326975885 0.000101274198775313 1.74421798415192e-17 9.405936184721e-08 3.16716645022558e-05 0.000935482632580102 XM_003587596.2 LOC100848264 PREDICTED: Bos taurus liprin-alpha-2-like (LOC100848264), 0.0 3804 100.00 0.723652591829729 NM_003626.3 liprin Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 7e-129 466 82.64 0.163405423961552 0 noncoding 0 0 0 0 -0.0570609256710494 0.626432706588582 -0.103665863845621 0.109834017371026 CACACTCGACAGGCTCTCAGGACAGCCCTGGGAACAACCCCAGCAGCAGCACCAGCAGGCAGGACTCGCTGCACAAAGCCTGGAAGAAGAATGGCATCAAGTCCTCCATCAGCCACTTGTTTCACAAGAAGGAAAAGGGCTGGCCTGAACACCCTGGCAAGGAGGCATTAGGACCAGGCAGGATCTTTACCCCTAGCGCCACCTGGAAAGCCCCAGTGAACGCTGACAACTAGAAATGCAGAAAATAAGGGCTGCTCCTAAGTTAAACTGGAAGAGCAGCAAGCACAGGTTGTAAAGAGGAAAACACACGATGAGCCACAACAGCACCAACAGAAACAAGGGATGCGTTCACCCACATAAAGAAAATATCTGTGCCATTCGGAAGAGGAGCCCGTCAGCCCTTGGAGGGACAGTTGGAACCAGAATGAAAACCGAGGCCATGGTCAGCAGTGCCCACCACATGGCCTGGGTGGCGTGGTGTCACTCACCAGGCTTCCTGTATCCCCAGAGCTGCTGGCAGTAACATCTCTGAGTGCTAGGCTGGGCAGCGTCCCCGTGTGAGCTAAGGCATCACTACTCTCCTTCCAGTGCTGCTGTGGGGCCCTCTGTGGGGGGCCACCCTCATCCCCTGCCCTGCCACCCTCTGGGGCCCAGCTGCCCCCAGGGATCCTTTCAGCCCTTGAGCTTGGGTGTTCCCAGCCCTCTGCCACGCCGGTCTGGGACATGACTCAGGACTTGGGCTTGAGATATCAAGGAGACCGTGAATCTGGAAGGATACCACCCTGGGGCCCATGAGAGAGCAGGAGAGCAAAGCTCCCACGGGGAGGAAGCAGAGCTGGGGAACGTGCCCACAGCCTCCACTGCCTCCTGCACAAGTGCCTCTTCTTTGCCTCTCCTTGACCTGAAACAAAGCCCAGCTGCTGCTGCTCCACAGGTGATTCCTAAAGATGCATCTCCTGCCAGAGCTATTGTCCTGCTGCTCTGGGGCTGCCTGAGTGTGCTCAGGAGCGTCAGACAAGTAGGGTTGCCACACCTCATACTGGAGGTGGGGGGCCTGATACTGGGGAAGGGTTGGGGGGTGGGGGAGGGCCTTATGCTGGACTAGAGCCTGATACTGGACTAGGGTCTGATGCTGGGGGAATGTCTGATGCTGGACTAGGGCCTGATGCTTGGGAACATCTGATGCTGGACTTCGTTCTGATGCTGGGGGATGGCCTGATGCTGTGGGGCACATCTGATTCTGGACTAGGGCCTGATGCTGTGGGAGGGCTTGATGCTGGGGGGAAGGTCTGATGATGGTGGGCAGCCTGCTCCCAGATGTACATGAAGTTGAGGATAAATCTCTATGGGAAATCTTTTTTTCATACTTTCCTGACCAGCTTGCTATGTTCTTTTTAACTTAAGGATCATTTTGTGCAATATCGGTTGATTTCTGCCATACATCAACATGAATTAGCCATAGGTGTACGTATGTCCTGTCCCTCTTGAATCTCCCTCCCACTTCCCCTTGCTACATTCTTGTTTCTATGGATATATGAATAATAAAGACCGTTGACTAAAATAACATGAAAAGCTCCCACACACAAGTGTGCACGTGCACACTCCCTTGTGCATTATTCGGGTCCACGAGAGGGCCCTGTCCCCGCAGATGCTGAAGTGATGGAGCCTCTTGTCTCCGGAGCCAAGGGCATGAACACACTGTCGGTCGTCCTCTAGGGACACCTATGCTTCCGCCTTCTGGCCTTTCCATTGCATCCGTCCGTTTCTCTTAACAGAATGTCCCTGTGATGACACGGGCTCCCGTTACCAGCTCTGGTCTGTTCTCAGTGAGAGTACAGCTTACCCTCAGCACTCTTTATTGGCCCTGGGAAATTTTGCTTCAGTACTTTATTGAAAGAAAGCAATAAATAATACTGTGATAAAAATAGTTCAAAAGTAGACTGTACATACTTTGTCACATATTTGGGAAGTTCACAAAAGATTAATAGGAAAATAGAATGATAACAATGAATTGTACAAGTAAATTAAAGGCGGAACCCACATGTAAAGAGACATGCTGTCTCTGTCTACCGAGATACCAGCTGCATAATAAATATCGCACCATGACCTGAACGCATCTCTTGCTGGCTTTTAATGTGCCGCTGAAAAAGTAAAAGTTACATTTGCTACTTATACAATCCAGTATGGCTATGTCATCACAATCTAAAAATGTATGCTTAGGTCCATTCTTTAAACATGTTTACAAACAGATGTAAAAAGATGATTTACATAAAAATAAGGCCTTTGTCAGAGCTGCACTATGCTGTCTGGAAAGTGGCACCTTCACTGTCCAGCTCGATGGCTCCACAGTGGGTGCAGGGCATCGCAATTGGTACCCGAAGAGTCTCACCAGAGAAGAGGGATCCAGGTCCACAGAGGGATCCAGGTCCACAGAGACTAGGTTATGGGAGAGATTTTCATAGTCTTCTTCTAGTCATCCTTTCAGCCCAAATTTCATTAGAAGCTCACATTTAACACTCAGTACTTTTAAATCACCTCACGCTGCGGACAAAAAGCATTTCTTGCTAGAAAAAGTACAGTTTAGGCCAGTCAAAATCCAATAACAATTGGTTGAAATTAAGTTTGCTTATTTCAGAGTGATTGTTGGAGAGCTTGGTTACATTCTGGAAGGATAATGTACACCATGTCATAATGATTTTACAATTGTAGGAAAACCCCTTCTCTCGTGGTTTAACATTTAAAAATTAAACAATAATTACAATAAATGCACTATTTACAAAAGCCCTATATTTGTTCATAGGATTTATACAGACAAGTACTACAGTACATTCATTTGAAAGACTAAAATCAGGTATCAGAACATGAATTGATCTGAAAGGTTATTTATAGCCTGAATATACAAGAAAAAGTAAG EMBV3_05000 TTACCTGGTGGACACTGGCATGTTCAGGGGCTGCCGAATCAGGAAAGAAATCGAGCCTTT Gene GeneID:282852|RDH10:NM_174734:4_cdna Constitutive 0 NULL GeneID:282852 14 GENE RDH10 NULL retinol dehydrogenase 10 (all-trans) EMBV3_31472 TGTGAAGGCGTTGATGGCGGGTGAGGAGTGGGCTTCTCTGACATCTAAGTTGGGCTCTTG Gene GeneID:790064|LOC790064:XM_002696148:69_cdna Constitutive 0 NULL GeneID:790064 19 GENE LOC790064 NULL similar to lung cancer-related protein 8 EMBV3_12368 CTCGGTCAGCACCGTGAAGCGGCTCTTGAACCATTCTTCGGCATTCTGCATGTTCTTGGC Gene GeneID:100297352|LOC100297352:XM_002689789:22_cdna Constitutive 0 NULL GeneID:100297352 8 GENE LOC100297352 NULL hypothetical protein LOC100297352 EMBV3_05911 ACTTGCAATACCTCACAGAGCCAGCCTATATACCACTCTGAGCTTCCGCTGGAAACACTG Gene GeneID:509488|SEC24C:XM_002698879:1_cdna Constitutive 0 NULL GeneID:509488 28 GENE SEC24C NULL SEC24 family, member C (S. cerevisiae) EMBV3_14483 CCCTGCAGGACCGCCATGGCTTATGATGACTCCGTGAAGAAAGAAGATTGCTTTGATGGT Gene BVV0102_408642 + 0 NULL GK000005.2:73730147-73872707 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192525 TCONS_00192528 TCONS_00192524 TCONS_00192523 TCONS_00192527 1 XLOC_117202 Coding TCONS_00192525 XLOC_117202 Coding Coding HMGXB4 5:73866692-73896916 j TSS144047 1907 1 TCONS_00192525_3 450 0.0188778185631883 10 0.937233232968269 0.00456925896979059 0.00368595853507858 0.00206528377301308 0.00310311178043815 7.28366187175598e-05 6.87495420875914e-05 0.000477729220056593 0.00201901558883934 0.00209336319192405 0.000442216835883973 4.69137567549586e-16 1.16499851878681e-23 0.000186233342656816 0.00181057153227399 0.000350397354742312 1.20199041300217e-91 2.71967665608642e-76 0 3.42475881303972e-05 0.00210025195873878 0.000465591644977625 1.02951107806518e-106 6.45580665897788e-05 1.53523202420861e-58 0.000184222783517056 0.00159316942239833 0.00105285177261371 2.62016136015198e-18 3.09000970556514e-27 1.25693125081497e-15 XM_005206776.1 HMGXB4 PREDICTED: Bos taurus HMG box domain containing 4 (HMGXB4), 0.0 3214 99.89 0.937598321971683 NM_001003681.2 HMGXB4 Homo sapiens HMG box domain containing 4 (HMGXB4), transcript 0.0 2444 89.95 0.952805453592029 TCONS_00192525_3 sp|Q9UGU5|HMGX4_HUMAN HMGX4_HUMAN HMG domain-containing protein 4; 0.0 680 92.24 0.971111111111111 3 coding 0 0 1 0 0.0568792614293974 0.727293995138546 0.00914927151014768 0.841124466184969 GGGATTCCCCTTCCAAAGCAGAGTCTGCGCTCTGGGCTCGACTGAGGCTCCCTGGTCGCTCGCGCTTTTCTCTCCTTCTCCAAGATGGCGGCGGTCGGCGGCGCTGAGGCGGGATCCGGGCGAGCCTAGTGAAGACCTGGTCCTGTAGACGGGAAGGAGCCTGGACACAGGGACCCCATTCTCAAAGGCCCTGCAGGACCGCCATGGCTTATGATGACTCCGTGAAGAAAGAAGATTGCTTTGATGGTGATCACAGCTTTGAGGACATAGGGCTAGCTGCTGGCCGAAGCCAACGAGAAAAGAAACGTTCTTACAAAGATTTTTTGAGGGAAGAGGAAGAAATCGCTGCTCAGGTCAGGAATTCTTCCAAGAAGAAATTAAAGAGGACAGTGAGCTTTACTTCTTGGGGACGGACACGCACAGGAAAAAGAGGAAGCACTCCTCCGATGACTACTACTATGGAGATATTTCGTCTTTGGAGCCGTCACAGAAGAAAAAGAAAAAGTCCAGCCCACAGTCTGCTGATACAGCTATGGACCTATTGAAAGCAATCACTTCCCCTCTGGCCACAGGGGCCAAACCCTCCAAAAAGATAGGAGAAAAGTCGTCCAGTTCCTCAAGCCATTCGGAGAGTAAGAAGGAACACCACAGGAAGAAAGTCAGCGGAAGCAGTGGGGAGCTGTCCCTGGAGGATGGCAGTTCCCACAAATCCAAAAAAATGAAACCGCTCTACGTGAACACAGAGACACTGACCCTCCGTGAGCCTGACGGCTTAAAGATGAAACTTATCCTCTCGCCCAAGGAGAAGGGGAGCAGCTCCGTTGACGAGGAGTCTTTTCAGTACCCCTCTCAACAAGGGACTGTGAAAAAATCTTCTAAAAAGTCAGCTCGGGATGAGCAGGGTGCTTTACTCCTAGGACACGAGTTACAGAGCTTTCTAAAAACAGCCCGGAAGAAGCACAAGTCATCCTCAGACCCACGTTCATCTCCTGGCCCCGAAGGCTGTGGCTCTGAGGCCTCCCAGTTCCCAGAATCCCACAGTGCTAACCTTGACCTTTCAGGGCTGGAACCTATCCTGGTAGAATCAGACTCCTCCTCTGGCGGGGAGCTAGAGGCTGGGGAGTTAGTGATCGATGATTCTTACCGGGAAATCAAAAAGAAAAAGAAGTCAAAGAAGAGCAAAAAGAAGAAGGACAAGGAGAAGCATAAAGAGAAGCGACACTCCAAGTCCAAGAGGAGTTCGGGGCTTCCCCCTGCTGCGGTGGCAGGAGAGGTCCCCGTGCCGCCTGTCCCCGCTCCCAGCCTCCCGTACGCCGGAGCCCCCACCCCGCCCCCACCGCTTCCCAGCCTCCACACAGACGGGCACAACGAGAAAAAAAAGAAAAGAGAGGAGAAGGACAGAGAGAGAGACCGAGGAGAAAAGCCAAAAAAGAAGAACATGTCGGCCTACCAAGTGTTCTGCAAGGAGTACCGCGTAACCATTGTGGCTGACCACCCAGGCATAGATTTTGGGGAACTGAGTAAAAAACTGGCTGAGGTGTGGAAGCAGTTGCCAGAGAAGGACAAACTGGTTTGGAAGCAAAAAGCTCAGTATCTACAACACAAACAGAACAAAGCAGAAGCTACAACTGTGAAAAGAAAAGCATCCAGCTCAGAAGGTTCAATGAAAGTGAAAGCTTCTTCTATGGGAGTACTGTCACCCCAGAAGAAATCCCCACCCACCGCCATGCTGTTACCTGCCTCGCCAGCCAAAGCTCCTGAGACAGAGCCCATTGATGTGGCTGCTCACCTCCAGCTGCTGGGAGAGTCCCTGAGCCTCATCGGACACCGCCTGCAGGAAACTGAGAGAGACCCCACATGTATCTGCAGTGGACTTCCCTGGTGACTCAACGGTAAAGAAGCTACCT EMBV3_36140 AGCTACAAACAACAGCCATGCAAATGGGACACAGAGTAAACCACGACAGCCTAGAGGTGC Gene GeneID:527394|PYGO1:XM_002690892:30_cdna Constitutive 0 NULL GeneID:527394 10 GENE PYGO1 NULL pygopus homolog 1 (Drosophila) EMBV3_13981 CACTTCTTCTAACCGTTCAACCAAGCTGCCTCCACTAAGAAGCCGCTGAAGGTGCTTGCT Gene BVV0102_021994 + 0 NULL GK000014.2:83299883-83360210 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01077 CCCGCCCAAGTCCCTCCGTATAATTTTCCAGGTTAGAACAGAGCTGCATCTTGATTGGCT Gene BVT0102_348860 - 1 EMBV3_39078 GK000013.2:32644377-32666583 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042478 TCONS_00042481 TCONS_00042472 TCONS_00042473 TCONS_00042479 TCONS_00042474 TCONS_00042477 TCONS_00042480 TCONS_00042476 TCONS_00042475 TCONS_00042482 1 XLOC_025674 Coding TCONS_00042480 XLOC_025674 Coding Coding SLC39A12 13:32664940-32704448 j TSS31603 2243 1 TCONS_00042480_7 353 11 0.943503682891639 0.00253182393857012 5.12659647694552e-07 0.00145138160585931 0.000228057604063758 0.000275414644864259 1.20584746873216e-152 0.000506408969391313 0.000707998864726593 0.00059072644248934 0.000438795913787964 9.18590160478102e-22 2.45416946549254e-05 0.000401378219929224 1.84731062890019e-17 7.7752907369418e-27 2.44451272525994e-40 0 2.68260770791396e-53 0.00364529907677249 0.00049723617914455 0.000363276777067377 0 8.17689242058858e-06 0 0.00202066583148765 0.00217554921732875 0.00114368034083484 4.68020865921491e-59 6.03837739389882e-08 5.35901020947222e-06 XM_005214202.1 zinc transporter PREDICTED: Bos taurus solute carrier family 39 (zinc transporter), 0.0 2659 100.00 0.656709763709318 NM_001282734.1 zinc transporter Homo sapiens solute carrier family 39 (zinc transporter), member 12 0.0 994 86.29 0.373606776638431 TCONS_00042480_7 sp|Q08E40|S39AC_BOVIN S39AC_BOVIN Zinc transporter ZIP12; 0.0 570 100.00 0.787535410764873 0 coding 1 1 1 1 0.0576630263598018 0.686706954852279 -0.0237948908345476 0.751674328231674 ACACAGGACTTCAGGCTGGATATCCATCTGGGAATCCGGAGAAAGATCTCAAAGTTCCAGCAGAGGGCGCTCTCCCAGGACCACTTCATAGCCAATCAAGATGCAGCTCTGTTCTAACCTGGAAAATTATACGGAGGGACTTGGGCGGGGAGGGCCGATCTGGGAACCTGATGATTGGAAGTGGGCCAGGAAGCAAGGGCTTAATTCCAGAAATAAGGCAGAGCTGAAGTTATGAAAAGCAGCAGGTGACAAGAGGACTGGATAATTCGCTCAGTAGACTTTGGGCTACTTAGTTACCAGCTCCCTGGGTCCCTGAGACTGAGATGGGACAGAGCCTACAAATGATGCTCAGGTGGTTCCAGCTGCTGAGTGGGCAGCAGGTCGGGAGCAGGAGCTTGCTGAGAACTTTGCCCAAGGTGCCTTCTCTGGTCCTGAGTCCATTTCCTGTTCTGCATCCACCTCCACGGCTGTCATTTATTCCCTAATAAGTTAGCGAGAGCTCGTTTCACAGCACCGGAGGGCATGATGTAATTACTTCTAACACAGAATCTGAGATCAGAATATACACAGCTAATTAAAGTTTCCCACTTAAGTCCCAGATCTTTGGTTTGAGTGTGGATAAAGCAGTTATCACAAAATCATCTGAGAAATAAAAGAAATCTTGATTTAACATGAAAACCTTTCCATTGTCAACTGAAAACTTTTCTGGGCTGAAATAATCCTCTCTAGCTCCCAGCGCACAGTCAAGGAATTTTAAAAACAGAGGACTTTGTAACCACGAAATACCCTCCAAGATTTAAAAGGCCACAGAGCTCCAGATAAATAATCATTTATCTTTCTTCTGAAGCTACAAGTTGACACCGTGAACACCAACCCATCCTCCTCCATCAGAGCAGACTCGGGGTAGAGGAAGAGTGGAGATGTGCTTCTGGACAAAGCCTTCTGTATCCTGGGTGTCCTTGTTCCTTCTACTCAGCCTTGATCCCTCAACTGAGACAGAAAAACCCTCAACTCAGGACAGCAGCAGCACTTGGAGTCCAGGGCAACTGACGGAAGTTCTACGGGTTCTCTCTGCTGATGACCCCCGTCCCCTGAACCACTCAAGAAGCCTCATCAGAACATTGCTGGAGAAAACTGGGTGCCCTCGGAGGACAGATGGAAGGCAAGGAGACTGCAATCTGAAATGTCCAGTACCAACCCTGTTTTGGTATATTGGAGCTGCGTTTGTGAAGGACCGTCAGACTGGAAAAATCAGACTTTTCCTCAGTGTACCCTTCCTGCCTGCCCTTCAGCCTCACCTCAGCTGTCCCAGAGGTTTGGGGTTTTTAACCAAGATCTCCAGTGCTTTGAACCGGATGCCCTGTTACTAATAGCTGGAGGAGATTTCGAGGATCAGCTCAAAGAGGAAGTGATCCAGCGAGTTTCTCTTCTCCTCCTCTATTACATCATTCATCAGGAAGAGATTTGTTCTTCTAAGCTCAACATGAGTAATAAGGAGTATACATTTTACCTGCACAGCCTTCTCAGCCTCAGGCAGGATGAGGACTCCTATTTCCTTTCACAGAATGAGACAGAAGATATCCTGGCTTTCACCAGGCAGTACTTTGACACTTCCAGAAACCAGTGTATGGAAACCAAAGTGCTGCAGAAAAAATCTGGAATCCTAAGCAGTGATGGTGCCGATGAAAACACTCTTCCTCAGTTGGCAGCGACAATCATTGCTTTGTCCCTCCAAGGTGTTTGTCTGGGACAAAGAAACTTGCCTCCCCCAGACTATTTTACAGAATACATTTTCAGTGCCTTGAATAGTACGAATACTCTTCACCTATCAGAACTAGACAAGCTCCTCAACACTCTCTGGACTAAAAGTACCTGTATCAGAAAGGATAAAATCCATCAGCTTAGAAGGAAACAAAACAGCCTAACACTTCATGATGGAGACTACTCTAATCTATCTGTATCCATGGACCCAGAATCAGAAGATGGTCCAATTTCCTGGGATCAGACTTGCTTCTCTGCCGGGCAGTTGGTGAACATATTTCTACAGAACAAGCTTTCACCCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGCATCATTCAGCAATTGCTCAGCTGTTCTTGCCAGCTGCCCCAGAACCAACAAGCAAAAATCGCACCCACCACTCTGGAGAAACTGCTTTTCTTCTTTGAGATAGTCTGCAACGCCCATCATAGCCAAATTGTTCAGCCCTTATTTC EMBV3_18324 TATCTCAGTCAACCCAGGAAGCAGAAGAAACTCTCTGCTTTTCGGAACTGATACAGGCTC Gene GeneID:510536|LOC510536:XM_002698555:60_cdna Constitutive 0 NULL GeneID:510536 26 GENE LOC510536 NULL similar to Uncharacterized protein C10orf88 EMBV3_26980 TCTGGGGCAGCCATGGAAACAGCACATTCCCAGAGTTCTTCCACAACATGGACTACTTCA Gene GeneID:506053|FOXP3:NM_001045933:42_cdna Constitutive 0 NULL GeneID:506053 X GENE FOXP3 NULL forkhead box P3 EMBV3_01703 ATGGGAAAATGGGGAGACAAGAGCATTTCCCTGTATGTCACAGTCACTCCCATGGTGGAG Gene BVV0102_264697 + 1 EMBV3_32869 GK000008.2:65976089-65993752 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21483 CTGTATGAGTTGAACCAGGAGGACAATTCAGTCCACTGCTGGCACTTCCAAGGGCTGGAA Gene BVV0102_190106 + 0 NULL GK000003.2:2022632-2089526 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168214 TCONS_00168216 TCONS_00168213 1 XLOC_103022 Coding TCONS_00168216 XLOC_103022 NonCoding Coding ILDR2 3:2020204-2024368 j TSS126182 3320 3 TCONS_00168216_7 62 0.168373493975904 3 0.203218832572664 0.000475896517051834 0.000754982316713149 0.00136398152728795 0.000489319156529191 0.000584268133307773 3.32429412611574e-08 0.000192857606543058 0.000340329277275812 0.000691574267151891 3.15462461747896e-05 0.0003161367989348 9.61703582314636e-05 8.18238203988503e-05 0.000433154513571652 1.02126379907174e-05 8.83827552421259e-29 2.44298354538204e-05 8.96715138122691e-05 0.000530913707951403 0.000854705217126052 0.000230864963008086 1.19831336239776e-05 6.46684593329438e-05 4.10487868327062e-10 0.00102825192561022 0.000531419045928245 0.000277513133115015 7.18881121856425e-05 8.33591819996241e-05 5.9968923466916e-05 XR_233801.1 ILDR2 PREDICTED: Bos taurus immunoglobulin-like domain containing receptor 2 (ILDR2), transcript variant X1, misc_RNA. 0.0 1440 100.00 0.240060240963855 NM_199351.2 ILDR2 Homo sapiens immunoglobulin-like domain containing receptor 2 (ILDR2), mRNA. 0.0 1148 74.92 0.530421686746988 0 noncoding 0 1 1 1 0.0553437498484073 0.654834820070353 0.0296652731538417 0.570961383957333 CATTCCCACCACAGGCCTTTAGGTGGGTTTCTGAGGTCTGCATTCTGACGATCTATGCTCTATGCATGCTTATGTGTGCGTTCCTCCCTAGACCCTGCTCCCTTTAGGGTGAGGGTTTGTAACTTGCATCAAATGCCGGAAGAGTCCAGATTCCAGAGAAGCCGTTGGTATTTATGAAGGACAACTCACTTCTTTTTTTCCCTTGACGTTTTATTGAGTGTAAACTGTACTGTGCCTGTATATGTGAAGGAAATCTTTCCGGCCCTGCCCAACTCATTTGTCTGTAGTGACTTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTTGTTTTCAAGACAACTCTCTGAATGACTAGGAATTGGGAACAGAACATGGGAACAAGACACAAATCCAAGAGCCAGCAGGCCCTGGACCTTCTTGGGCCACCACCTTGGAAGATTTGCTGATCTTTGCTTTGGCAAGGGATGGGGGGCAGCCTTTAAGGGAGGCTGATTGCAAACCTCAGTGCCCATCTAACTAGTTTGAGAAATTTATCAAGAAAACAAGTACAGGTGAACGCATTCCTACACATGGAGTTTCTCACCCACAGAGTTCATCCCGCCCTGTCTCCTCCCTTAGCCAAACCAGGATTCCTTTTCCATTTCTGAAAGAGAGTTAGTTCTGGACTGCTAATCTCCAGATAATGCCTATACTACAGTCTGCTTTTCCATACCTCCTGTGCTGTGCTTAGAAACAGAACCGATTACTACTATTAGAAGGCCTTCACCCACAGTGGAAGATAGCTTCAGGCAAAATACACCTTTTAGCCCCATCACTTCCCAGTCACTTGTCAATGACTGTTGTTACACTGAAATCAGGCCTGTGGTGAGCTCAGTGACCATGACCTGCTGGACAATCACAGAAATGACTTCAATTTGCTGTTCCTAATGACAGTTCTTGGCTGGAACAAAACAAGAGCTGTCAAAGTGGTGTTTCTTTTTTCATTCTGAGAACATGAACTGCTTTTTCTCTTTTGTCATAGCGACGTGAGTCTTGGACATCAAGGGCTCTTCTCGTCCTCCCCTTTCCTGGACTGTCCACAGGCTCTGCTGGCTCTTCTGCGTGTTTTAGACTTCATTTACCATGAGTTGTTCCTGCCCAGCCCAGTTTCATCACCCCAGGACACCTGAGTGTGGAGCAGGCATCCCTGGGCCTCACCAGGCTGCCACTCTAGATGCTTTTGGGAGATGAGGGATATTGCTTTCTCAGGAAGGAGCACTTCCTACTCCGTGTGTGCATGCTAAGTCGCTTCAGTCATGTCTGACTCTTTGCGACCCCATAGACTGTAACCCACCAGGCTCCTCTGTCCATGGGATTCTCTAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGGGTCAAACCTGCTTCTCTGGTTTGTCTCTGGCATTGGCAGGTGGGTTCTTTAACACTAGCACCATCTGGGAAGCCCTTTTCTACTCCTACCCCTGCCTGAAGGATAGATTTTGCTTAAATCTCAAATCTAGGACTCTCTGGATTTCATAATTTGTATAGATTGGTAAAAAAAAAAAAAAAAAGGCTACAAACTCTTCTCTTCTCATCAAGAGGTGCCGTCTATTTCTCAACCCCTTGATTTGGGATTGGCCATATTATTTGATTTAGCCAGTGGCCTAATAACAGATATGATAGAAGCAGAAACTTGACAGATTCTTGTGCATGAGGGAATTTATCCTCTCTTGCTGCTTTTGGGAACCGTGCATCACCACCAGGTAAATTAGCCTGGCTGGCCTGCTGCATGATGAAAGGGCCCAGTTACCCCATCACTCTAACTGGCAGCCTATCAACTCTCAGCTGATTGCAAACATGAGTGATCCCAGATAAAACCAAAAGAAGAATTGCCTCGCTGAGCCCAGCCCAAATTGCTGATTGCTACCCAAGGCATGAGAAGCTGGTTCACTCTTTAAATGTTCAGTTTTCTTCAAGGAAAAAGCTGAGTTTTTTTTTTTTTTTTTTTCCTTGTCTGAATATTTAACCCCCAAAACTCTAACCTTAGGTGAGTGCTGGTCTCTACTTTCTTTGACAGACTTTTGTCAAAGCTTTTCACCCCACAGTTATGGTGGGATACTTGGTTAGGTCAAATCACTGGCAGACAGTGTTGCTTGGTCTCTGTATCCCTCTACTTCAGCAGGCTCCATCCTCTGTCTGTGGATCCATGGACAACTGCTGAAGAAAGTTTCTTCCTCAGCATCTCTTTGGTCTTCTCCGGAACCACCTGACTGGGGCTAGGCCCTTTTCTCAGAGTACCATTGCACTGATATCCATTTAATTCATGGCATTTCCAAACCAGTTCTATGTGTGCAATGAAATAATAAGTGACTGGGTGAGAGTCAGAAGGATGAGTTGATACCATTGCTGGGGGTAGAATTGGCCTGCCAAAAGACTTCATAATGGCCTTGGCCTGTATGAGTTGAACCAGGAGGACAATTCAGTCCACTGCTGGCACTTCCAAGGGCTGGAAGACACAAGCCATAACCCTGGTGCTGAGTTTTTAGACTTGCTGAGCTTTTAGTCCTTGTCATCTGAAAGCCTAGGTCTCATCTGTCTGTTTGGGCCCCATTTCCACTGGAAAAGATGATTAAAACACCAATTCTTAGTCACCAGCTTTGGATTTTAAATTGCTCAGGCAATTTTGGAGAATCTTGGGTAGCTGAAGTAGTTATTATTTCTTCATACTGAGCACTGTGTCGGGCTATTCACCACCAAAGAGCCCCATAGCACCAGCTGCAGAGACCAAAAATACTGCTTTCATTAGCCAGGGGCATGTATGATTTTGGTGAAGGGAGCCATGGGAAAGAATTATTAAAATCGGAAACCTGAAGGCAACAAAACTACCGACAGACAATAAAAAATACAAAGATGATAACAGATTACCGAAATAAACTGGGTACATGGGACCAGGTTGTCCTCGGAAGGGCTGCATAAATCACTCAGACCTCCAGGTTTCTGGTCAAGAGAGAAAACAGTCATTTCTGGGAATGTGGACAAGAGATAAGTCTGACCGGACAAGTAAAGGCAAAGCTGGCCATCCTCAGCACCCTGGCTTTTCTCAGCACATCCTTCTGTTTCTTTTCCCCTGACTAGTCCTGTGTAGAAAGTGCTTACACATATTAGCTTCCTTCCTTTGTTTTACTGGGGGTAAAATATTAGGCTTGTGTAAGACAAGATCTCTGTCCATGCATGCGTGCGTGCTCAGTCCCTCAGTCAGGTCCAACTCTTTGCAACCTCATGGATTGTAG EMBV3_34015 GGGTTCTCAACCTCACCGAGCGGCAGGTCAAAATCTGGTTTCAGAATCGGAGGATGAAGA Gene GeneID:100295214|LOC100295214:XM_002687231:88_cdna Constitutive 0 NULL GeneID:100295214 5 GENE LOC100295214 NULL similar to homeobox C9 EMBV3_33941 TTCCATCAGACTCTCACCGGCTGTCTTACACCACTCTCCTCTTGGTGCTACAGTACTTTG Gene GeneID:504813|NPY1R:NM_001045898:40_cdna UTR3_Alt 2 NULL GeneID:504813 6 GENE NPY1R MGC137850 neuropeptide Y receptor Y1 EMBV3_22990 CTGCGCGAGGTACTTCATCGATTCTGCCAACCTGAAGACCCACTTCCGATCCAAAGATCA Gene GeneID:508477|ZNF593:XM_002685703:377_cdna Constitutive 0 NULL GeneID:508477 2 GENE ZNF593 NULL zinc finger protein 593 EMBV3_23045 GGGAAAGATATCTATAAGAAAGGCAGAAAAGTGGTTGAGCCCCTCCAACCTTGCCCACCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36617 AACATCCTGTTCCTGCTTTTGCTCCCAGTGGCTACAGCTCAGATGACCCCAGGTTCCTGT Gene GeneID:767892|HCST:NM_001076977:781_cdna Constitutive 0 NULL GeneID:767892 18 GENE HCST DAP10 hematopoietic cell signal transducer EMBV3_01275 GCAGCCTTGGCAGGAGTGCTTATTCTAGTGTTGCTGGCTTACTTTATTGGTCTCAAGCGC Gene GeneID:529148|LAMP2:NM_001113244:12_cdna Constitutive 0 NULL GeneID:529148 X GENE LAMP2 MGC127297 lysosomal-associated membrane protein 2 EMBV3_25119 TCCTTCTTATGCAGGGGGAAACAGAGCTTGGGTGAGGAATGACAGGAACAGGAAAACCAG Gene BVT0102_261138 + 1 EMBV3_39922 GK000022.2:6885302-6894654 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125849 TCONS_00125852 TCONS_00125848 TCONS_00125850 TCONS_00125851 1 XLOC_077320 Coding TCONS_00125850 XLOC_077320 Coding Coding CMTM8 22:6842020-6889192 j TSS94562 4503 3 TCONS_00125850_1 100 0.280257606040417 4 0.904623603485192 4.24600081190995e-05 0.000348104072885733 9.60123097052233e-05 0.00013581789851444 3.55536992746e-05 1.69092251855145e-05 0.000142153722004661 4.54259062518798e-05 6.39145676117347e-05 6.92341029616488e-06 2.56699016247763e-10 1.32705298629808e-16 2.90485254664681e-06 0.000224815806385134 2.07094316322116e-09 0.00034640656715972 9.08576213678997e-05 0.00025200938026233 1.13713801905005e-06 2.59338089259418e-09 8.28702046169858e-09 0.000575123313217771 3.03853314541333e-09 0.000127312547314462 0.000210947334507951 0.00066940097399353 0.000291392077170756 5.73303531103893e-05 1.33083916533223e-07 1.7647071164202e-09 NM_001046358.1 CMTM8 Bos taurus CKLF-like MARVEL transmembrane domain containing 8 (CMTM8), mRNA. 0.0 1023 100.00 0.125693981789918 NM_178868.3 CMTM8 Homo sapiens CKLF-like MARVEL transmembrane domain containing 8 (CMTM8), mRNA. 0.0 827 84.51 0.16055962691539 TCONS_00125850_1 sp|Q1RMP9|CKLF8_BOVIN CKLF8_BOVIN CKLF-like MARVEL transmembrane domain-containing protein 8; 1e-66 202 100.00 0.99 1 noncoding 0 0 0 0 -1.52091172706883 0.0128836806568095 -0.362185458852533 0.0117634129456072 CAGCAGGCTGTGAACAGGAACTTCCTTTGAGTTGGCGTTTACAGGGTTCTGGGACTGCTGGTGTGGACACTCATCGCTGGAACGGAGTACTTCCGGGTCCCTGCCTTTGGCTGGGTCATGTTCGTAGCTGTGTTTTACTGGGTCCTCACCGTCTTCTTCCTCATCATCTACCTAACGATGACCTACACCAGGATCCCCCAGGTGCCCTGGACCACGGTGGGTCTGTGGTTTAACGGCAGCGCCTTCGCCTTATACCTCTCAGCTGCTATTGTGGACGCATCTTCCGTCTCCCCGGAGAGAGACAGTCACAACTTCAACAGCTGGGCGGCTTCGTCGTTCTTTGCCTTCCTGGTCACCATCTGCTACGCTGGAAACACATATTTCAGTTTTATAGCTTGGAGATCCAGGACCATACAGTGATTCACCATTTTGAAAATTAAAAGGGGGAAAACAAAAGGAAGACTCACTGTAAAACAAACAAACAAAAAACAAACCTGTAGGTATAATGTATATTTCCAGAGATTTGTATTTAACTAATGTTTTTATATACTTAGTTAAATTTGCTCACACTGGTTTGTTACAATTAAACTGGATACTTATTTGCTGTAGCTTCTAATGAACTCTTAACTATCTTGTTGCTGTCTTCATAGACCTTATTTTCTTAGGCAATGTAGAAAGAGATGAACTGCTGATAGGAAGAATGCATCAGCTTTATAAACCAAACTTTTAAAAATGCTAGATTCTTTTTTGATTAAATGTTGCAGAATCCAGGGTAACAAGGTGTCTCATTCAAGAAAGGAGACCTTGGCAGCAGTCTCTCAGAGCTATCTTAGATGCTGCCTCCCAGGCTGCAGTCCTCATTTTGCCCCAAATAAAACTTAACTCACAACTCAAAAAAAAAAAAAAAAAAGGAGACCTTTTGCTGAAGCCTGAGGCTGGGGGCTGCAGGGAGTTCTTCGCCCTCACAGGGCTGCCCAGGGTTGATACTGCTGGGAGACACTGTCCACAGGCCAGTGTGTCAGAGCGATCCATCTCCCCAAGCCTGGGGGTCATTGGCAGCCATGATTCTCACACGCTGACTGGTTGGCACCAAAAGCATCTAATGGCCACTAACCTTGGAGCTTAGTAATGAGCTCCCCTTAAGTGATGCTCTGAGCACAGTGGCGGATGCGCTGGTGGGTGGTTTTTCTAACACTGATCAAAATAAACTCATAACCATTAAAAGAATAAATACTTGGGTGTACCTTAAAACCATCCTGCTGACCCCAGAGACAGAGTACCACATTGAGTAGAACATGTGTGACCCAAAGGCCCCAAATCTCTGGGCTCCAGCCTGAATAGTTGGTAACATTGTTATCAGCTCTTAGGAGACAGTAGGAAGCTGCCCGTTTGGGAGGCAGATGTGCACTCAGAGGAAGTGTTCTCGAGCAGGATGGCTCTTGCTGGCACGGCAGTGTATCTTGGGTGATTTTTCAAACTGAGCCTCTTTTGAAAAACAAAAAACCACAGAAATGTTAGTGTAGTTGGTGACAGGAGCAGGTTCAGTTGAACACTGTGGACGCGGCCCCGTGGCCCCCGCCGTTCTGCTCGTGGCGGTGCCGTTTCTTTCTCCTGTGGGTTGTTTGTGCTGGTTTTCCTGTTCCTGTCATTCCTCACCCAAGCTCTGTTTCCCCCTGTATAAGAAGGAAAGAGTTGGGATTTCTCGAGTGTCTAATGACACCCACCCCAGACCTTTGAAAGTAACAGTGAAGAATGTTCTTGGCTTGTGGGTCCAAAGTGGTTTCGGGGAGGGGACAGCAGGAGGGAGGGAAGTGTGGGGCACGGGAAGCCTGTCTGAGTCCCACCTGTAGTCTCGATGCTTCGGCTTCTGCAGCTCACACCTGCAGCTGCCTGGGGCTGCCCACGATCTTTCTGGAGTTTTGTTCCCAGGCATCGCCCGGACAGCCTGCGACTTGCTGGTTTTGCAAGAAAAGCTGAAATAACTAGTCAGGGTGTGTGCACACCACCTCTCTGCCCATCTTTCCCTCTCACACTCGCAGAAGCCTATTCACCTTCCACATACCTTCCGTGTATCGATTTTTCTTAAATTGAAATACAGCGGGTTTACAGTGTTGTGTTTTAAGTGCACAGCAAGTGATACACTTTAACATATATGTAAGCATATATATTCTTTTTTTACATTATCTCACATTATCGGGTGGGTTTTTAAGTACTTTGTATTGCAGTTAAGCCTCCATGAAAGGCAGAAAAACTGTAACCTAAGAGGTCTGTTTCTGGAAACAGTCGTGAGGAAGAAGCCTGTTTTTATGTTCTGTGTTTGTGTGTGTGTGTGTGATTTCTACAACCATGGCCACATTTATAGGAAGTAACTTCTGGGGTAAAAGGTTTCGTTAGCCAACTTGAAATAGCCTCCAAATAGACTACAACCAACTGTGGCCCTTTCCTAAACTGGGAGCACCAAAGGGATCAGTTTCAAGGGATCTATTTCAAGAGATCAGTGTTTCATTTGTGTCCACGTAGGGTGTGGGGGACTTGCCTTCACGTCTCTATGTGTGGCTTTTCAAGAGCATGACCCCTTAGTGTTGCCTTGAAAGTTCACCTCCCCAAAACCACCCAAAAAACAAAAAGCATTTATTTTTAGCTGAAAGGAAGTTCTTATTTCTTCTTTTGAATGCTGACTTTGTTCGTTAATAATTTTTAAGTGTGAATTTTTAGACAACAAAATGATTCTCTGCTGAAGCTGTAAGTTTTGAGCTGGGTTTAATTTTTTTCTGGAAAAAGAAGGAAAAAAAAAAAGCAAAGCCACATGCAACACAGCCTGCATAACAAGAAGAGTAGTTTTCTGGGGATGAAAAATATTATTCCAAGTATAATAGAATGTGCTTACACTCTGGCGTCTTAGCCCTTCCAGCACCATCACGTTCATAGAACTGAGGGCGGCGGGTTTCATGTGATGTGTTTACCCACTCATGACAAATCAATGGAATGCTCTAGGCGTTTAATTTCTCTCTATGGCTATTTCCGGCTCTTAGCCCCACAAGGTAAATGTTTAGCCAGTATTTTAAAACTGTAAGAAAATCTAGAGGCAAGAACGTTCGGCATCAGTTACTTTTGTCCATTTTTAAATTCTCCCTTCATAGGAGACTCCCCACCGGGTATCAGGGCACAAGCATGTTAAATACACAAGCTGTCTCTGCATAGAGCACAGACATTTAATAATACTAACTGAAGATGCAGCCCTGGGTAGGAAATCAATTTAAAAGTCTGAATTTCTGTTCCCTAGACAGTTCTTAAATTGATAAGAGATTTTCACAGGAAAAAAAAACAATCCAGGCACACGTTATTTTATTGCCCTTCACTTTACTGCACTTCAGAGATACTGTGTTTTATACAAACTGAAGGTTTGAGGCAGCCCTATGTGGACCCAGTCCATTTTTCCAGTAGCATTTCCTCACTTCGTATCTGTGTCACATTTTGGTAATTCTCCCAGTATTTCAAACTTTCTCATTATTATGTTTCTTACAGTGATCTGTGATCTGTAATGTTACTATTTGTTTCCAGGCACCACCAACCATGCCCATATAAGATGATGAATTTAATCCATAAATGTGTGTGTTCTGACTGCTCATTCCCCATCTCTCTCCCTCTCCATAGGCCTCCCTGTTCCCTCAGACAACAGTATTGAGATCAGGCCAGTTAATAACCCTGTAACGGCCTCTTAAGTGTTCACGTGAAAGGAAGAGTTACACGTATCTCAGTTTAAATCAAAAGCTAGAAATGATTAAACTTAATGAGGAAGGCATGTCGAAAGCCCAGACAGGCTGAAAGCTCAGCCTCTTGTGCCAAACAGCCAAGTTGCAAATGCAAAGGAAAGGGTCCTGAAGGAAATTAAAAGTGCTACTCCAGTGAACACAAGAATGGTAAGAAAGGGAAACAGCCTAATTGCTGATATGTAAGTTTAGGGGTCTGTGTAGAAAGAAGATTCAAACAGCCACTTTTCTTGAAGCAGAAAAAAAAAAAGCCTAATCCAGAGCTAGGTCCTAACTCTTTTTAATTCTAGGAAGGCTGAGAGAGATGAGGAAGCTGCAGAGGAAAAGTCTGAAGCCAACAGAGGTTGGTTCATGAGGTTTAAAGAAAGAAGCTGTCTCTTTAAAGGTGGAGGTGAAACAGCGAGTGCTGATGCAGAAGCTGTAGCAAGTTGTGCAGAAGATCTAGATAATTCATAAAAGTGGCTACTCTAAATAACAGATTTTCAGTGTAGACAAATGAGGCTCCTATTGGAAGAAGATGCCATCTAGAGCTTTCAGAGCTGGAGAGGAGAAGTCAGTGCCTGGCTTCAAAGCTTCAAGGGACAGGTTGACTCTGTCGTTCGGGGTGAAACACAGCTGGTCATTTTAAGTTTAGTGTTCATTTACCATTCTGAAACTCCTAGGGACCTTAAAGTGAAAGTGTTAGTCGCTCAGTCGTGTCTGACTCTGCGATCCCATGGACTGTAGCTCATCA EMBV3_02394 TCACATGTCTGTCACCCTGAGCTGGTCAATCACTTCTGCACAAGACCCTACGTTGCAGAA Gene GeneID:507839|PRMT2:NM_001024495:21_cdna Constitutive 1 NULL GeneID:507839 1 GENE PRMT2 HRMT1L1 MGC129035 protein arginine methyltransferase 2 EMBV3_06462 GTGAGAACTAGTCATGGCAGAAGACCTCCATCCAAGACCTCCCTGGCGTCGTCAATGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33006 GCATTCAATTTCACAGAGAATAAGGCACCTGTCTGCCTACCAACCAAAAACTTGTGGTAG Gene GeneID:534655|SIAH1:XM_002694877:877_cdna Constitutive 1 NULL GeneID:534655 18 GENE SIAH1 NULL seven in absentia homolog 1 (Drosophila) EMBV3_13779 TGTCTGCTCCGTGGATCCCACTGCCGTGGAGACCAACATGGTGATGGTGAGGGTGGACGG Gene GeneID:507443|LOC507443:XM_002696158:98_cdna Constitutive 1 NULL GeneID:507443 19 GENE LOC507443 NULL similar to threonine aldolase 1 EMBV3_41492 ACATATGGCTGAATCTCTTCACTGTTCACCTAAAACTATTACAACATTGTCAATCGGCTG Gene BVV0102_033452 + 0 NULL GK000002.2:4905245-4945254 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00253 CACAGTCTGGGATTCTTACCCTGCCTGACAGATGTGGAGGATGGAACCCTCAAGTTTCGT Gene GeneID:527165|PDGFRB:XM_002689291:126_cdna Constitutive 0 NULL GeneID:527165 7 GENE PDGFRB NULL platelet-derived growth factor receptor, beta polypeptide EMBV3_39151 CTGAGTGCAACTGTTATTCCTGTGTTCCCAGTGGTACAGCAGACCTTTCTCCATTTCTCC Gene BVV0101_030043 + 0 NULL GK000005.2:51172712-51209080 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37073 CTGAGCGGCGGACCGAAAATGTGGAGACCTGTCTCTGCGGGTCGGCCTGCAGATCTCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42165 GTGATGAGCTATAGTGCCAAATTCGCTTCTTGTTTCTATGGACCTTTCCGGGACGCGGCT Gene GeneID:510679|ALAD:NM_001014895:20_cdna Constitutive 2 NULL GeneID:510679 8 GENE ALAD MGC137079 aminolevulinate, delta-, dehydratase EMBV3_04713 CCAGAATATGGAGAAGTAATTCAGCTACAGGGTGACCAGCACAAGAACATATGCCAGTTC Gene GeneID:781102|LOC781102:XR_084169:102_cdna Constitutive 0 NULL GeneID:781102 17 PSEUDO LOC781102 NULL similar to Eukaryotic translation initiation factor 1 (eIF1) (Protein translation factor SUI1 homolog) (Sui1iso1) (A121) EMBV3_07585 AAGAAACATGGAAGTGTCTTTTGTCCCCAAGTGCCTTAACATCTCGACAGTGCACTTCTG Gene GeneID:617037|PECR:XM_002685568:10_cdna Constitutive 1 NULL GeneID:617037 2 GENE PECR NULL peroxisomal trans-2-enoyl-CoA reductase EMBV3_19547 ATGGAAATAGAGTTCTGAAGGATACCAAAGGCTTAGCAGGGAGCTGAAATATCTCCAGGC Gene GeneID:282357|SLC2A2:NM_001103222:2_cdna Constitutive 0 NULL GeneID:282357 1 GENE SLC2A2 MGC148474 solute carrier family 2 (facilitated glucose transporter), member 2 EMBV3_34038 GAGCCCCCTAGGAGACCCAGGCAAGTGTGGAAAAGAGTATCATTTATAGTAACGACTCTG Gene BVV0102_140940 + 0 NULL GK000013.2:55439177-55451202 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23047 GGTGTTCTAGACAAAATCACCATTACGGTTGGATTTTTCTCAATGAACTTCTCTGTGGTG Gene GeneID:529196|LOC529196:NM_001075921:131_cdna Constitutive 1 NULL GeneID:529196 22 GENE LOC529196 NULL C-C chemokine receptor type 1-like EMBV3_05554 ACAGTCCTAATTTCCTATGCCTTCATCCTGTCCAGTATCCTCCGCATCAGCACCACAGAG Gene GeneID:783205|LOC783205:XM_002699211:115_cdna Constitutive 0 NULL GeneID:783205 29 GENE LOC783205 NULL similar to olfactory receptor Olr1194 EMBV3_13622 TCACAGGTCTGCAAGGAGCAGAAAACCTTTGAGCCAGGAGTCCCAAAGAAATGGACCTCT Gene GeneID:534040|SPINT1:NM_001046367:175_cdna Constitutive 0 NULL GeneID:534040 10 GENE SPINT1 MGC126946 serine peptidase inhibitor, Kunitz type 1 EMBV3_35325 CTACTGCCTCAAGCACAGTGGTATATTCAGCGTTTTACGATGGGATAATGAGACAGATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09041 GTTATATACTGATTTTTGACTGTGAGCCTCCTACCCTCCTCTGAAACTTGCTCAAGGGTC Gene BVV0101_043996 + 1 EMBV3_16309 GK000017.2:56543399-56573544 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19039 CAGCCCAATCTCCTCTCTCGATTGTCCTACTATTGATATTTTGGAGTTTCTGTCCACAGG Gene BVV0102_096440 - 1 EMBV3_04099 GK000029.2:43281243-43416169 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163837 1 XLOC_100046 NonCoding TCONS_00163837 XLOC_100046 NonCoding NonCoding - 29:43394696-43398928 - TSS122722 746 3 TCONS_00163837_2 48 0.89142091152815 2 0.824155046088395 0 0 0 0 0 0 2.00503349482701e-13 0 5.48416623283148e-10 8.88791453740028e-21 3.2014746459979e-05 3.95832462114526e-18 0.000385881153833141 0.00116997938818166 0.00247717593118363 0 0 0 0 0 0 0 2.43482147571986e-71 0 0 6.87331498230865e-10 0 7.53583947413661e-05 5.18612375512691e-27 4.75188281051949e-10 XR_237740.1 LOC101904589 PREDICTED: Bos taurus uncharacterized LOC101904589 (LOC101904589), 3e-62 242 76.74 0.455764075067024 0 noncoding GAGGGGGCGATAGAGTACTGAAGCAGGAGGCTGCTCTCCCAAGCGCAAGACATCGAGCTCTGGAAGCTAGAAAGGGCGAAGAGGAAGATTTTCCCATGAGCCTCTGGAGGGAGCAAGTCCCTGCCGTCCGCCTGATTTCAGCCCAGGAAGACACTGACTGTGACCGCTGGACCCCCGGCTGTCAGAGAAGCAGCGTGTGGTTTTAAGCCGCCACGTTGGTGGTCACTGTCCCAGCAGCAGGAGGAAACAGGAGATGTCTGTTGAATGAATAAACTGAGGCAGGAGGTAGATGCCCTCCCCTACATCCCCTGGGTGAACAACTGGAGTTCATTTCCTGTGGACAGAAACTCCAAAATATCAATAGCAGGACAATCGAGAGAGGAGATTGGGCTGTGCCAGGATAAAAAATAAGAGACCACATATCTCTCATTCTTGAAGTCAAGGAGACCTTGTTGACTAGAAAGCTCCTTGGAGGTCAAAAGAGGAATGATGCCAAGGCTACCCAGAGGCCTCTTCAGTGGAATCCATCTCGGCTGAGAGACGCATGGGCGCACACGGGAGGATCCTGAGATACACCGCAGACAGACTCAGAACCACGCAAATCGAAATAATCGGCCAAAGGAAACCTGGAAAAGATGCCCCATAAAAGTGATTCAAACTACCAGGAGGGTGTGACTCTCTCTGAGTCCGCCTCTGTGTCGGTCCACAAGTACCATACTCTTTTCCTCCTAACAAACTTGTTTCAC TCONS_00163841 s 5' 17035 TCONS_00163841 s 5' 21266 EMBV3_42116 GGACCTGTGTTCAAAGACTTTTAAAAGACAACAGCAAGAAACAAGGGAAGAGGACACTGG Gene GeneID:535023|FAM107B:NM_001046393:127_cdna Constitutive 1 NULL GeneID:535023 13 GENE FAM107B C10orf45 MGC137524 family with sequence similarity 107, member B EMBV3_40349 GGTCCATTCCATTGCTGTCCTTTATTGTGCCCATCTTTGCATGAATGTTCCCTTGGTATC Gene BVV0102_417614 + 0 NULL GK000030.2:56640413-56796256 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065417 1 XLOC_040136 Coding TCONS_00065417 XLOC_040136 Coding Coding - 15:61226259-61227326 - TSS49160 1067 1 TCONS_00065417_5 249 0.997188378631678 1 0 0 0 1.17084271084767e-05 0 5.01274891357752e-06 0 0 5.54331748049925e-06 0 1.73571278171056e-05 5.36361164224327e-07 3.35115712028554e-06 0 5.32707495269329e-06 6.89715970499279e-06 6.18827987315989e-06 0.000275933473589219 0.000722117049004012 6.56064039510558e-06 2.24661395780619e-06 0 0.00104632974409319 0.000190588625001148 0.000130278129053029 8.11676168037646e-07 3.30152217939975e-06 0 4.96112073426862e-05 2.76777762422426e-05 0.000255862760139617 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 814 91.75 0.530459231490159 TCONS_00065417_5 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-15 77.8 25.74 0.8714859437751 1 coding CATTCAGGTATGACCTAAATCAAATCCCTTATGATTATACAGTGGAAGTGAGAAATAGATTTAAAGGCCTAGATCTCATAGATAGAGTGCCTGATGAACTATGGACTGAGGTTTGTGACATTGTACAGGAGACAGGGATCAAGACCATCCCCATGGAAAAGAAATGCAGAAAAGCAAAATGGCTGTCTGGGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGCGAAAAGCAAAGGAGAAAAGGAAAGATATAAACATCTGAATGCAGAGTTCCAAAGAATAGCAAGAAGAGATAAGAAAGCCTTACTCAGTGATCAATGCAAAGAAATAGAGGAAAACAACAGAATGGGAAAGACTGGAGATCTCTTCAAGAAAATCAGAGATACCAAAGGAACATTCATGCAAAGATGGGCTCGATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGATGGCAAGAATACACAGAAGAACTGTACAAAAAAGATCTTCATGACCCAGATAATCACAATGGTGTGATCACTGACCTAGAGCCAGATATCCTGGAATGTGAAGTCAAGTGGGCCTTAGAAAGTATCACTATGAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTACACTCAATATGCCAGCAAATTTGGAAAACTCAGCGGTGGCCACAGGACTGGAAAAGCTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGTATGCTTAAACTACCACACAATTGCACTCATCTCACACACTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCATGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAGGGCAGAGGAACCAGAGATCAAATTGCCAACATCCACTGGATCATGGAAAAAGCAAGAGAGTTCCAGAAAGGCATCTATTTCTGCTCTATTGACTATGCCAAAGCCTTTGACTGTGTGCATCACAGTAAACTGTGGAAAATTCTGAAAGAGATGGGAATACCAG TCONS_00062036 . 3' 288025 TCONS_00062036 . 3' 289091 EMBV3_04086 AGGAATTGGTTATCCAGGTTACACTTCTGGCACTCCTTACAAAGTGTCCTGTTCCCCCAC Gene GeneID:505853|MGC148679:NM_001109790:15_cdna UTR3_Alt 4 NULL GeneID:505853 2 GENE MGC148679 NULL hypothetical LOC505853 EMBV3_31290 GCTTAAAAAGTGACCCTAATTCCAGTTCTAAGTTGACTAGTGAGACAGAGTTGGCTCTTG Gene BVV0102_311488 + 0 NULL GK000012.2:89166037-89182099 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122162 TCONS_00057018 2 XLOC_073717 XLOC_034820 Coding TCONS_00122162 XLOC_073717 Coding Coding - 21:1772539-1775435 - TSS90921 2896 2 TCONS_00122162_4 128 0.529696132596685 1 0 0 0 3.99429237089488e-06 4.09636275561967e-07 8.52413058866487e-07 0 0 0 2.27042002203111e-07 3.82411180031261e-05 3.6839645581712e-05 3.43094684177662e-05 2.71357414579017e-05 5.73429012149388e-05 1.00289177284479e-05 0.00317577469528192 0.0015648618742292 0.00254687651403682 4.12692309504149e-07 4.66932941297714e-07 0 0.00152554386478111 0.0011050183461842 0.00196659893501018 0 8.10942159484766e-07 1.01159413821291e-06 0.000394968477206089 0.000653039532847899 0.000661454511772567 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 3e-64 251 82.86 0.0825276243093923 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 2e-09 69.8 87.50 0.0189917127071823 TCONS_00122162_3 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 4e-20 87.8 43.75 0.983739837398374 1 noncoding 1 0 1 1 -1.24075784477828 0.0930142068557468 0.608620933927897 0.000821382859058691 CCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTAGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTTTATTGAAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTTTATTGAAAGTGTCAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAAGCTAAAAGCTTTATCTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTTAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGGTAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACGAAGAAAAGGAGGGAGACTGTGCTGTACCTCTGGAGGAAGGAGAGGGCTTACAGGACGCTGCAGCCGGGCGCCCGGGCGAACCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGATTTCTTTTAAACAAAGGAGCTTTTAAAGAATACACAATATACAGAGCCTGCTCATTGCAGAAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAAGCAAAAAAAAAAAAAAAAAGAAAACTGAAAAAGAAAAAAGGAAAGAAAATCGAGAAAGATCTAAAGATAGAGAAAGAGCTAAAGAGTGAAAAGGAGAGGAACAGAGAAGGAAGGAATCAGGGAACGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAAAGAAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACTAAGGAAAGAGAAGGGTAGCAAAAAAGCAAGGGGGAGAGAAAAGTGAGAAAGGCAGGAAGAGAAGGAGAGAGAGAGAGAGAGAGACAGTAAGAGACGCTGGGACCCCGCGCCCTGGCGAGCTCCCTCCCCTCTGCGCAAACCTTTAAAAAAACAAACAAACAAACAAACAAAAAAAAACTTATCCACCACTTTCTGATTTAAGGCGATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCTTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCGGGGGTGGAGTGGGGGGGCGGTCTCACCCAGGCTAAGAAAAAAGCGGACCGGTAAGGGGATTTAGCAACAATTTTAACCCCTGACTTGCGGTTGCTCCGATTCCAATGGGAGTAGCTGGCCCCCTGCCTGAGGGCATTGTAGGCCTTGTGCTAGGATGTAGCTCGCTTTCTTTTCAAGGAATTTGGGTGGTGTATGGTGTAGTAGATTATGATTATATTGGAGAAATTAAAGTTTTGATCCCGCCGCCTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGCTTTTGCTTTTACCTTATCAGACAAGAAAAAACTTGATTTCTCAAGCTAAGAGCCACAGAGTGTTTAGATCTAGTGATCTAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTTTAAAAGATCTTTTAATTCAAGAAAATAAAATGTCAGGGCTATTAGACACAGGAACAGACGTCTCTTAACATTGCTGGGAAAGACTGACCCAACTCCTGGCCAACACATACTACTGAAAATGAGTTGAGACTAGAAAAAGTGGTATGCGGGGTGGGAATGCTGTAGAGAAAAGGGTGAGGGAGAGTTTAAAACCTTGACGAGTAGTGAGTTCCCCATTGCTGGAAGTATTCAAGCAAAGATTAGATGGTTGCTTGTCATCTAAAAGGCTATAGACCAGATTTAGATTACAAAACGATAACTGGAGAAGCTTATAAACATGTTGTGCAACACCTCTTTACTTGCTTCTCATATTTAGGTCTGCCAAAAGTTTTAAAAACTGATAATGCCCCTTTGAAGCTGTGGAGAGATCGTTTACTAACTTTAAATGATTTCCAAAAATTATTAGGGGACATTAATTGGATACGCCCTCATTTAAAACTGACTACTGCAGATTTAAAGCCTTTGTTTAATTGCTTAAAAAGCGACCCTAATTCCAGTTCTAAGTTGACTAATGAGACAGAGTTGGCTCTTGTTAAAGTAGATGAGACTTTAAATGATCAGTTAATTAGGATTAATATTATAAAAAGATGAAATTAAATTATTCTTGCCATAAAACACACCTACAGGGTGATTGTGACAAAAAGGCCTATTGGTTCCATCTACCAGTGACCCCAAGAAATACAGTTTTATCTTATCCCCGCTTGGTGGCACAATTAATTATAAAAGGAGGAAAAAAAGAGTGTGGAACTTTTTAGAAAAGAAGTAGCAAATATAGTAATTTCACTCAATAAGGATCAACTGCAAGTCTTTTACAAAGTAGTGATGATTGGCAAGTTGCCCTGATAGATTTCAGGGGTCAAATTTTGTTTCATTTGCCCTCAAGCCCCCACAGTAGTTAAAAGTTCAAAAATGTTAGATTGGCAGTTTGAGGATACCTGTGGAACTTTCCAAGCCTATGTAGTTCCTATGCTCCCCTTTACCCTATGGGGGAGGGACGTGCTG TCONS_00118509 TCONS_00118510 . 3' 69017 TCONS_00118509 TCONS_00118510 . 3' 71912 EMBV3_35938 CATGTCCATTAAGTCGGTGATGCTATCTTAACCATCTCATCCTCTGCTGCCTCCTTCTCC Gene GeneID:506955|ILVBL:NM_001015535:32_cdna Constitutive 0 NULL GeneID:506955 7 GENE ILVBL NULL ilvB (bacterial acetolactate synthase)-like EMBV3_40772 GAAGTTCCATAGAGGAAAGGGTGCAGGCAAAGGCACAGGTTCATGTACCTTTAGGTATGG Gene BVV0102_316930 + 0 NULL GK000015.2:46732272-46757448 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24452 AGACTGGGACATAAGCGGAGACCTAGGAGAGCCGCAACAGTGTCTGGTGGAGAGATATGA Gene GeneID:509192|DULLARD:NM_001046026:57_cdna Constitutive 0 NULL GeneID:509192 19 GENE DULLARD MGC138117 dullard homolog (Xenopus laevis) EMBV3_04533 TTCAGAAGTTGCATTGCCTGGGCTTAGTTGCTCCGTGGCATCTGGAGTCTTCCCAAACCA Gene BVV0102_426501 + 0 NULL GK000019.2:15425810-15446155 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15817 GGATGAACTTGGATGACATTGAGTGAAGACACAGAAGAATTAACTACCGTCTGATCTTGC Gene BVV0102_350709 + 0 NULL GK000007.2:45888279-45900411 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220839 1 XLOC_134156 NonCoding TCONS_00220839 XLOC_134156 NonCoding NonCoding - 7:45894090-45895464 - TSS164837 1374 1 TCONS_00220839_3 121 0.991266375545852 1 0 3.96090035607299e-05 0 0 0 5.03060845491186e-05 0 1.48551041663894e-05 0 0 0 0 0 0 0 1.78536858496543e-06 3.84448201583355e-05 0 0.000520445235754274 0 2.61695952295781e-06 0 3.78054959472761e-05 6.00920403279855e-05 0.000372139465717623 0 1.70923516857625e-06 0 0 0 5.25086993176695e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 949 89.12 0.511644832605531 0 noncoding TTTTAAATTATATATAATTATTATAATGTAGGGTATACAATGCGATGATCTAATATACAGACGCATACAGTCAAGGTAATTACCACATCCATCACCTCACGTGGTTACTTTTTTGTGTGTGTGATGAGAGATCTACTTTCTGGGCCAGTTTCAAGTGTAAAATACAGTATCATCAACGGCGGTCATCATGCTGTAGTTGAGATCCCTGAACTTACTCATTTTATGACTGAAAGTTTGTGTCCTTTGACCAGCATCTCCCTTTTCCATAGCCCCAGCCCTTGGCAATCACTGTTTTACACTCTGCCTCTGTGAAAGTTAAAGAGGAATGAAAAAGAGGAATGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGATGGGGAAACAGTGGCTGACTTTATTTTTCTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGTCATGAAATTAAAAGATGCTTACTCCTTGAAAGGAAAGTTATGACCAACCTAGATAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGATGGACTGTGAAGAAGGCTGAGCGCCGAAGAACTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTTTAAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAGATCAGTCCTGGGTGTTCATTGGAAGGACTGATGCTAAAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGAGCTGACTCATTTGAAAAGACCCTGAAAGATTGAGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTAGATGGCATCACTGACTCGATGGACGTTGAGTCTGAGTGAACCCCGGGAGTTGGTGATGTACAGGGAGGCCTGGCGTGCTGCGGTTCATGGAGTCGCAGAGTTGGACACGACTGAGCAACTGAACTGAACTCTGTGATTTCACCTTTAATATGTCCCACACATAAGCAAGATCAGACGGTAGTTAATCTTTCTGTGTCTTCACTCAATGTCATCCAAGTTCATCCAAGTTGTTGCAAATTGCAAGAAGACTTCCTTCTTTTTAAGGCTGAATAATGCGTATGTGTGTATTTCTGCTGTATGCAAAAATTAGGAATGATTTCTAACTAAATAATGTGATTATAATGTATCTGCAACATATATATCATATTTTCTTTGTTTCTGAGGTTGTTTCCATGTCTTGGCTGTTGTAAATAGTGCTGCAGCGAACATGGGTGCGAGTGTCTCTTTAATACAACTGATTTTATTTCCTTTGGATAAATACGCAGAAT TCONS_00216872 TCONS_00216873 . 3' 4948 TCONS_00216872 TCONS_00216873 . 3' 6321 EMBV3_02742 ATTCTGGAGCAGAGATGAGGTCTGAGGCTGGACCCCTGCTGCCTTCTCACTATTTGCAAT Gene GeneID:514104|WDR81:NM_001105366:112_cdna UTR3_Alt 2 NULL GeneID:514104 19 GENE WDR81 MGC166345 WD repeat domain 81 EMBV3_31468 ATGTGGAAAAGGTGACGACCTTCGAGCACCGTGAGTACGACCAAGTGCTGGTGGAATCGG Variant GeneID:281788|GNA11:NM_174322:5_cdna 434^751 1 EMBV3_19523 GeneID:281788 7 GENE GNA11 MGC128352 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) EMBV3_05878 GACAGAATCAACCTCCCTCGAAATATAGTTAGATTGGAGATATTGCTGGTGTTGCTGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17282 GTGGAGTCGGCGGCCCAGCGAACCCGAACGGGATGCAGGTCACAAATGTCCAGTTGACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26643 GACCTAATGGACAGGGTAGTGACTGGTTAATAATACAGTGAGTACTTGAAACTTGCTGAG Gene BVV0102_371646 + 0 NULL GK000002.2:16883246-17084638 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30369 CATGCTCTACTACTATGGCCAGATCCACATGTACGAGCAGAACGGAGGCCCTGAGAACCA Gene GeneID:510255|GLI2:XM_002685451:80_cdna Constitutive 0 NULL GeneID:510255 2 GENE GLI2 NULL GLI family zinc finger 2 EMBV3_42070 TGAATCACTTGCCTAGGGCTGGAATTTGGGACTTCATTTAGGTGAACTTGAGGCGCTGCC Gene GeneID:614509|MXI1:NM_001076331:75_cdna UTR3_Alt 2 NULL GeneID:614509 26 GENE MXI1 MGC140538 MAX interactor 1 EMBV3_22953 GCCTCTGGAACTATGAGAAAAAATACTTCTGTTGTTTAAGCGCCCCCATCCGTGGTCCTC Gene BVT0102_348014 + 1 EMBV3_34840 GK000023.2:47269547-47328260 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138059 1 XLOC_084268 NonCoding TCONS_00138059 XLOC_084268 NonCoding NonCoding TXNDC5 23:47316222-47317546 i TSS103349 1324 1 TCONS_00138059_1 101 0.688066465256798 1 0 0.000534363882538165 6.40887600388464e-05 0.00127347401478917 4.39040817112551e-05 2.23738551635237e-05 1.08067981746218e-05 0.000232710857524497 8.93461577699275e-06 6.55524733515596e-05 0 0 5.4013310156534e-06 0 0 1.14018226030434e-05 0 0 0 0.000146235084736667 0.00224596520991193 4.58569683717489e-06 0 0 0 0.000708196943618134 5.32135635193703e-05 0.000697728477288566 0 1.46664734043051e-05 0 XR_138971.2 LOC100847863 PREDICTED: Bos taurus uncharacterized LOC100847863 (LOC100847863), 6e-50 203 84.49 0.140483383685801 0 noncoding 0 0 0 0 0.0033866899787296 0.980755164863743 0.00492555500486785 0.921347190073859 CCTTCCAGTGAATATTCAGGGTTGATTTCCTTTAGAATGGACTGGTTGAATCTCCTTCCTCGATGCATGACCGGGCAATAAATCGAGACAGCTGTTAAGGCAGGAAAAGCAACTTTATCTGGAAAGCCAGCAGACTGGCAGGACAGCAGACTGGTGTCCCAAAGAACCTTCTTGCCCAGGTTTGATGCTATTAATAGTTTCTTTTATAGAAGGAGTTGGGGGGGAGGACACTGTAAAGTAAAAAGGTGATAAGTTGTTGCAGTTATTTCCTGACTCTGGCCAGACTCCAGAGGGGAATGTATCAATGTCTTCCTTCCTGCAGCCACTCACAGGTGGGCCTGGTCAGACTGTTTCCTGTGAACTGAACAAAGGTATTCTAACCTAATGTTTAGGCTTGGGAGGCAGGGTTTCCGTAGATGGGCCTTTATGTATATTCTAAGTTATAGGCGACATCATTTTGGGCTTTCCAGGTGGCGGGTGCAGTGGCAAAGAACCCGCCTGCCAATGCAGGAGGCACAAGAGATGCCGGTTCGATCCCTGGGTGGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCATTCCAGTGTTCTTGCCTGGAGAATTCCATGGACAGAGGAGCATGGTGGGCTGTATAGTCCCTGGGGTCGTGAAGGAGTCGCACACAATATCATTTTAGTGATTAACTTGTAGCAGAAGCAATAGAATACAAAGGTCCAAGGAAAAGGAACAGATCCAACGTGGAGTCAGATTTGTTCTTCCCTGTCGATTCTTCGTGTGAAAAGGGCCCCTACTGAGAAGTCAGGGACCCGCCCGTACAGTCACAGATGGTGTGGACTGTGAGCTGCAGGGGACTGCAGGCTGTCCCCTTTCCTGGACAGCGGGGACCGTGGCTGGACCTTCCTTAGCAACTTGGCTTGGTTTGCCTCTCACTGGTCTTGTATTTTGTTGTGTTAAAAAGCACGGAGAGGAAAATGAGAAAAGGGAGTTCACTGTGATATCAGAGAAGAGGTGCCTCCTTCCCTGAGCTGAATTCCAGGGTAGAAGGCCCCTGGGTGGCTATTCCCGGGCACAGGTCCCCCTCCAAAACAGGACTTCCTGAGGCTCAGTCTCACCCAGCGAAGGGAAGACTTGGATGGGGTTTGACTTTGCCTGGGCCTCCACAACAGAGGACCACGGATGGGGGCGCTTAAACAACAGAAGTATTTTTTCTCATAGTTCCAGAGGCTAGGAGTCCAAGGTCACGGTGCCAGCAGGGCGGGTGTCTTCTGAGGCTTGCGGACGACTTTCTTCTCCCGTGTCCTCCTGTGGTCTTTCCATCTGTGTG TCONS_00133591 . 5' 700 TCONS_00133591 . 5' 700 EMBV3_27299 GTGCGGACTGCCTGATGGGTGTGTATCTGTTCTTCATTGGCCTTTGCGATCTAAAGTACC Gene GeneID:507053|LOC507053:XM_002691757:291_cdna Constitutive 0 NULL GeneID:507053 12 GENE LOC507053 NULL similar to INSL3 receptor; INSL3R; GREAT EMBV3_06469 GTGAGACTTGAGTTCATCTTTCTCCATTTAACCCTGGAACAGCTTTCATGCCAAGTTTAG Gene GeneID:516259|EEA1:XM_002687214:87_cdna Constitutive 0 NULL GeneID:516259 5 GENE EEA1 NULL early endosome antigen 1 EMBV3_25790 CCACAAGATGCCCACCCTGGTGACCCCTGTGAGCTGGACAGTCCAGGAACCCAGGAGGCC Variant GeneID:614193|MIIP:XM_002694038:103_cdna 428^574 3 EMBV3_27978 GeneID:614193 16 GENE MIIP NULL migration and invasion inhibitory protein EMBV3_04830 GGCGTAGCGGCGTTTAGGCCGAGCTACCGCGGTGCTACAGGCAGCGGCGGTGGGGCTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32757 GCCTGCCAGCCCTTCTGGATTTTCTCTCCCAACTGGTGAACATTATGGCCCTGAAACCAA Gene GeneID:539000|RAB7L1:NM_001099094:91_cdna UTR3_Alt 4 NULL GeneID:539000 16 GENE RAB7L1 MGC148495 RAB7, member RAS oncogene family-like 1 EMBV3_03595 CTGGTTGGGAAGGCGTTTTGCTGGGCTCTGTTACCTGATCCAAAGAAGCGAGTGGATGAA Gene GeneID:100335527|LOC100335527:XM_002696771:454_cdna Constitutive 2 NULL GeneID:100335527 21 GENE LOC100335527 NULL hypothetical protein LOC100335527 EMBV3_40175 AGCCGCTGCCAAGAAGCATAAAGGAGGAATTTTAAGGAAGGGTGCCAAGCTCTTCTTCCG Gene GeneID:529537|C2CD2:XM_002685118:34_cdna Constitutive 0 NULL GeneID:529537 1 GENE C2CD2 NULL C2 calcium-dependent domain containing 2 EMBV3_03026 CAAACTCGTGGACGACTATTATGAGACCAGCAGCCAGTGCTCCAAGCCCGGCATCATCTT Gene GeneID:525415|LOC525415:XM_002695622:18_cdna Constitutive 0 NULL GeneID:525415 19 GENE LOC525415 NULL similar to C-C motif chemokine 3-like 1 precursor (Small-inducible cytokine A3-like 1) (Tonsillar lymphocyte LD78 beta protein) (LD78-beta(1-70)) (G0/G1 switch regulatory protein 19-2) (G0S19-2 protein) (PAT 464.2) EMBV3_30608 CGGCAGGAGATGGTTCGGTCTGTCTTAGAGCCAAGTAGCCTCCACCTCACAGCAGCCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31769 CGGTGGCACACAATATGACAATGCCAAATAAGCTTCTCCGAATCCAGGATGATGGGACCC Gene GeneID:282236|GABRA2:NM_174541:5_cdna Constitutive 0 NULL GeneID:282236 6 GENE GABRA2 NULL gamma-aminobutyric acid (GABA) A receptor, alpha 2 EMBV3_38225 CAACCCAGACGTACGGACTACCTCCTTTCGCTTCAAGCACAAATGCCAGCCTGATACCCA Variant GeneID:514364|LOC514364:XM_002685686:335_cdna 450^587 1 EMBV3_08863 GeneID:514364 2 GENE LOC514364 NULL similar to eyes absent 3 homolog (Drosophila) (predicted) EMBV3_39169 TCTCTGACGGACCCCCTGTGCTGAGCTCTTAGTGGAAGTCCAACAGCCTTTACAAACCTT Gene GeneID:281134|ECE2:NM_174046:6_cdna Constitutive 1 NULL GeneID:281134 1 GENE ECE2 MGC152524 endothelin converting enzyme 2 EMBV3_36853 ATGGCTGCCCAAGGAGCCCCGGTGACTGTGTATGGTGATCTGTTTGTTTTGCAACTGACA Gene BVT0102_174408 + 0 NULL GK000030.2:18238358-18405702 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249483 1 XLOC_152426 NonCoding TCONS_00249483 XLOC_152426 NonCoding NonCoding - X:18254337-18254742 - TSS186704 405 1 TCONS_00249483_1 58 1 0 0 0 0.000525536264523887 0.000451089954915033 0.000768005353677629 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00155812755589072 0 0 0 0 0 0 0 0.000188071388983178 0 0 0 0 noncoding 0 0 0 0 -0.113210545122934 0.339204851237307 -0.0272742618519697 0.63996971088452 GGGAAAAAAAAAACCCGGCCTTTGTAGTGTTAGGGGATGACATTTCATTGCAAAAATAAATGATTTGGTCATTACCATTTCATGGTTGCTGGCAACCACTCTCCTCTGCTTTCTAACAATTTCCATTTTAGGCACTGACAGGCCCTTCAAAGTGATTCAGCCAAATATCCACCCAAAGTTGCGTATTTGGCAGTTTCATACTTGAGAAATCTGGGGCCTCTGGGCAAAAATGTCAGAAAGGGCTCCCTCCTTCTTTGTCAGTTGCAAAACAAACAGATCACCATACACAGTCACCGGGGCTCCTTGGGCAGCCATGCCGGAGGGAAGGGAAGGAGTGGAAGTTGTTGGCAGGGGCTGCCTCCTTGGCTCCGGCTGTTGCTCTCACTCCCCATTGCTGCTTGCGCT TCONS_00246455 . 5' 4192 TCONS_00246455 . 5' 4192 EMBV3_14725 GCTGTGATATTGGCTTTGAAAATGGAGGAAGAAGCCACAAGCCAAGGAATGAAGGTGGCC Gene BVT0101_006068 + 0 NULL GK000001.2:132450545-133255675 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13194 TGACGACCTTCGGCCACTCTACTCGTTCCAGGCTGACTTCCAGGGCAAGCTGTACCCCAT Gene GeneID:616685|TRIM50:XM_002698190:720_cdna Constitutive 0 NULL GeneID:616685 25 GENE TRIM50 NULL tripartite motif-containing 50 EMBV3_11342 TGATACAACCACCCCAGAGTCTTTTGTCATGAAGCCCCCGAAGCCTCCCATCACTACCTC Gene GeneID:527275|MADCAM1:NM_001037821:74_cdna Constitutive 0 NULL GeneID:527275 7 GENE MADCAM1 NULL mucosal vascular addressin cell adhesion molecule 1 EMBV3_16661 ACCTGCTCTCTGACGGCTCCAACACCCTTTCCGTGTCCTACAAGAAGGGCCGCATGATGA Gene GeneID:407174|SLC6A17:NM_001166573:44_cdna Constitutive 0 NULL GeneID:407174 3 GENE SLC6A17 NULL solute carrier family 6, member 17 EMBV3_11862 AGGAGGTGGAGGTGACTGACATCAGCGACGAGGACGAAGAAGACGGGGAGGTGTTCAAGA Gene GeneID:789798|ERF:XM_002695073:482_cdna Constitutive 0 NULL GeneID:789798 18 GENE ERF ETF1 similar to Ets2 repressor factor EMBV3_24859 AGTCACAGTGCTACAGATGAGGTTCTTGTCTCACAAAAGGGCAAGAGGAAGCAGACAGGG Gene GeneID:789010|TGIF2LX:XM_002699757:28_cdna Constitutive 0 NULL GeneID:789010 X GENE TGIF2LX NULL TGFB-induced factor homeobox 2-like, X-linked EMBV3_07744 TTTGGATCATCCCCCAGGCTTGGAGTCCAGAGTCCAGATTCTAACAAGAGCCTACTGGTT Gene BVV0102_096509 - 0 NULL GK000024.2:48022061-48164154 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23641 AGAAACTGCCTGCAAGCGTCCGGATCCCGTTTCCCCTCTGCCTGTTTTCATAGGGTGTCT Gene BVV0102_159419 + 0 NULL GK000003.2:33880599-33932971 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09619 GGTATCATCTGCATATCTGACCAGCAAAGTGGATGCCTGCAGTGGAAAGAAGGCCATCGA Gene BVV0102_402251 + 0 NULL GK000011.2:105711513-105737317 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33926 TGTAAATAACCTGACAATTAACATTAATATTTTACAATGCATTCAGATCTTGGGAAAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19504 TCCAGTGGTGGGGTTTCAGAAGTCTTGAGTAATGACCGGTGTAGGTTTCTCATGGAGGAC Gene BVT0102_069631 + 0 NULL GK000015.2:32755340-33298814 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058884 TCONS_00058883 1 XLOC_036215 NonCoding TCONS_00058883 XLOC_036215 NonCoding NonCoding - 15:32901750-32913783 - TSS44272 1970 3 TCONS_00058883_4 70 0.229441624365482 3 0.836519281914894 0.0088313937441082 0.00859410109160966 0.00988040011505759 0.00435328868305956 0.00636468044241727 0.00240842606300065 0.00384134858752021 0.00596357445433069 0.00637819050504889 0.00159020302627482 0.00113554476636092 0.000278977757321431 0.00142770020896596 0.00440032042361484 0.00260053008310031 0 0 0 0.0102578141492292 0.0119988383810397 0.00242338603089646 1.12832674846353e-05 0 0.000297848681493574 0.0115561554310036 0.0101067513111144 0.00831618927347516 0.000226841674442072 0.000295712114988781 0.000342007709008241 XM_005198046.1 LOC100848679 PREDICTED: Bos taurus DEAD-box ATP-dependent RNA helicase 30-like (LOC100848679), transcript variant X2, mRNA. 4e-09 68.0 87.27 0.0274111675126904 NM_000962.3 PTGS1 Homo sapiens prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) (PTGS1), transcript variant 1, 6e-26 123 70.65 0.142131979695431 0 noncoding 0 0 0 0 -0.105724493005078 0.400484553860128 0.0514607626306802 0.532380983073516 ATGCAATGCATGGTGCTACTGAAGAAACCCTTTAGTCTGATTCCATCTTGATGCCAGGAGGCCCTGTAGCTGTATGTCCTCCATGATTTATGTATGAATGTAAAAAGATGTGATACGGCTGATAAAAATACAGGTTTTATCTGATTTCGGCTCTGTTCAGAAACCACCGGTTTCTCTGGAGTCTTGTATTTCCCGCCCACCGTGGCCAGCATTTTACGGTGTTAATCAGATTTTGCTGTTTTTCTTCACACTGAGTCCCTTCCCTATCCATTCCACCCTCTTGACTCTTATCCTCCCACCCTCACCTTCATGGTGCATGGGCCTATTAAATGGTGTCCAGTCCAATTTCTGGCACCCAATAAATCTAAATTTTCAAGCTTGGGAAGCCAGGCTCACCTACTGGCACCTAGATAAATGAGTCCTCCATGAGAAACCTACACCGGTCATTACTCAAGACTTCTGAAACCCCACCACTGGATTTCAGGCCAGAGAAAGTCAAGTCCTCCTTTCAGCCTTCATTCTCCAAAAAAGAAAATAACCCACAGCCCAGGGCCTCGCCTTCATCTACATCTCCAGTCCCTCCATCTGGATGCTCAGACTGAATCCCAGCCTCCCACTTGCAGCATCCTGCCGGCTCCTACGTCACCCCGTCAGGTCACCCCATCAGCTCTGCAGCTTTGAAATGAGACTTAATATCCGGCACACGCGCCTGCGCTGCTCAGCTCGCCGGGGCTCCAAGCCTGAAGATGAACAAAGAGCCTCCGTGAACTGTTTCATTGTTTGCAACAAACAAAGGCTCTGACATTGTCTCCTGCAGGAGAAGGGGGATCTTGGGGTCAGGGACGTTTGAACCCAGGTTGGTTTCCTGGAAAAGTGGTGGGAAGGAGGAGCCAAGAGCCGGGGCTGCTGGGGAAGCAACAGGAGCTCAGGGCTGTGTTTCATTCCAGGAGGCGAGACCTGGAGGTGGTGGGAAGTTGGGGACTATTTGTATTTACTTGTTATTTTGACTTGTGAAATTACTCCCTTTCATTCCACCAGCCTTCTGCCTCTGCACAATAAAAATTAATTACAATGAATTAGAACCTTTAAAAACCACGCTTAATAGTAGCTCAGAGACAGCCCCTCCTCTGGCCCCTCACTAGTCTACAGCTCAACATCTGATCAATCTGGCAAGAACAATTTTAAAAGGAAAAAGTACCTGCTTTTGGCTTCTATGAATAAATCTGGGAACTAATAGGATACTGTGATGGTTAATGTTATGTGTCAGCTTGGCTGGGCTAGAGTACCCAGTTATTTAATCAAGCACTGATCCATGTGTTGACTGGATGGGTATTTTGTAAATACGGTTACCAGCTACAGTTGACTGACTGAGTAGATTACCCTGAATAATGTGGGTGGGCCTTGTCCAATCAGTTGAAGTTCCTAAGAGAAAGCCCTGAGGTTTCCCAGAGAAGAAAAAAAAAAAATTCTGCCTCAAGACTGCATCAACTTCTGCCCAAGTTTCCAGACTATTGGCCTGCCCTGTATTCCTTGAAATAAATCACACATATATTTGTGTGTGTGTATATATATATATATAAACATATACATCTGATCTATATCTGTATCCCTATATATTGCTGATTCTGCTTCCCTGAAGAACCCTGACTCATACAGCTATTTAGAAAGCTTATACTGAATTCGAATTGCTCATTGTGTAACTTTTGGAAGGAGGACTGCTCTTCTTCATTTCCTGAACATGAAGTCTTGTGCTGTGGACATAGTAGGTGCTTAGTAAATGTTCATTGAAGGGACTGGAAACCCAAAGAAGCCCCATAATGCTTTTCTCAACTTCTACTGCCCCATTTTCAAATGGAAACATTTGCTCCCTCCCATCCACTTGGGACTCATCAGCTCTACTTTGCTGACCAGCTCTTCTCTGGATGTTCCTATCACGTTGTCATTCACTGAAGCCTCCATCACTCTCTACT TCONS_00058859 TCONS_00058860 TCONS_00058861 TCONS_00058862 TCONS_00058863 TCONS_00058864 TCONS_00058865 TCONS_00058866 TCONS_00058867 TCONS_00058869 TCONS_00058870 TCONS_00058871 TCONS_00058872 TCONS_00058873 TCONS_00058874 TCONS_00058875 TCONS_00058876 s 3' 146134 TCONS_00058859 TCONS_00058860 TCONS_00058861 TCONS_00058862 TCONS_00058863 TCONS_00058864 TCONS_00058865 TCONS_00058866 TCONS_00058867 TCONS_00058869 TCONS_00058870 TCONS_00058871 TCONS_00058872 TCONS_00058873 TCONS_00058874 TCONS_00058875 TCONS_00058876 s 3' 146134 EMBV3_31415 AACTTCTAAGAGGGCTGTAACAGTTGCTGCTAGTATTTTTCTTGGGGTTCCACCAGTATT Gene GeneID:521004|SLC39A10:XM_002685505:26_cdna UTR3_Alt 2 NULL GeneID:521004 2 GENE SLC39A10 NULL solute carrier family 39 (zinc transporter), member 10 EMBV3_20875 TAAACCTCTGGGCTTCTGGACCAAGTTCGATGTGGCTGACTGGCTAGAGTGGCTGGGCTT Gene GeneID:518970|SHANK1:XM_002695214:934_cdna Constitutive 0 NULL GeneID:518970 18 GENE SHANK1 NULL SH3 and multiple ankyrin repeat domains 1 EMBV3_29467 GTCTGAAATAGCTCCAGAGGGTAAAGACCCTTCCTTGAAGGAGATTCTCAGCTTCTCACC Gene GeneID:100297753|TPC3:NM_001161651:5_cdna Constitutive 0 NULL GeneID:100297753 11 GENE TPC3 NULL two pore channel 3 EMBV3_15377 GGTCTCGGGGACAGTGACGGTGGGTACGGGGCAAAGAAGCCTAAAAGATTTCTTACTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06320 GAAGGCTGAGCACTGAAGAATTGATGCTTTCAAACTGTGGTGCTGGAGAAGACTCCTGAG Gene BVV0102_200805 + 0 NULL GK000025.2:36088162-36096007 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016660 TCONS_00016661 TCONS_00044408 TCONS_00044413 TCONS_00018697 TCONS_00074047 TCONS_00232755 TCONS_00021043 TCONS_00177089 TCONS_00124968 TCONS_00024776 TCONS_00125259 TCONS_00016658 TCONS_00042389 TCONS_00125442 TCONS_00039755 TCONS_00176652 TCONS_00016659 TCONS_00143824 TCONS_00179033 TCONS_00029871 TCONS_00199216 TCONS_00034398 TCONS_00027670 TCONS_00157746 TCONS_00142793 TCONS_00030710 TCONS_00210790 TCONS_00036438 TCONS_00044411 TCONS_00063308 TCONS_00009982 TCONS_00027668 TCONS_00209584 TCONS_00117196 TCONS_00077043 TCONS_00084610 TCONS_00117088 TCONS_00201339 TCONS_00027666 TCONS_00013104 TCONS_00162631 TCONS_00072498 TCONS_00221572 TCONS_00118423 TCONS_00175178 TCONS_00232121 TCONS_00199632 TCONS_00056163 TCONS_00202411 TCONS_00114121 TCONS_00129173 TCONS_00013106 TCONS_00081496 TCONS_00185852 TCONS_00053295 TCONS_00142044 TCONS_00110701 TCONS_00027669 TCONS_00027673 TCONS_00056999 TCONS_00207062 TCONS_00130064 TCONS_00240703 TCONS_00131020 TCONS_00133303 TCONS_00068323 TCONS_00013105 TCONS_00078880 TCONS_00057242 TCONS_00251984 TCONS_00209443 TCONS_00039874 TCONS_00123162 TCONS_00044412 TCONS_00027667 TCONS_00218516 TCONS_00157074 TCONS_00044409 TCONS_00044410 TCONS_00178092 TCONS_00141595 TCONS_00138351 TCONS_00048827 TCONS_00041915 TCONS_00071298 TCONS_00179952 TCONS_00027672 TCONS_00122324 73 XLOC_008885 XLOC_026198 XLOC_009379 XLOC_045806 XLOC_142239 XLOC_011717 XLOC_106863 XLOC_076511 XLOC_014574 XLOC_076801 XLOC_025656 XLOC_076984 XLOC_023572 XLOC_106426 XLOC_088244 XLOC_108806 XLOC_016126 XLOC_120869 XLOC_020631 XLOC_015299 XLOC_096201 XLOC_087218 XLOC_016963 XLOC_129300 XLOC_021151 XLOC_038035 XLOC_005534 XLOC_128095 XLOC_071362 XLOC_046965 XLOC_051620 XLOC_071254 XLOC_122986 XLOC_007995 XLOC_099512 XLOC_044266 XLOC_134886 XLOC_072589 XLOC_104961 XLOC_141607 XLOC_121285 XLOC_033966 XLOC_123969 XLOC_069203 XLOC_078054 XLOC_050375 XLOC_111905 XLOC_031688 XLOC_086471 XLOC_066603 XLOC_034801 XLOC_125581 XLOC_078775 XLOC_147367 XLOC_079725 XLOC_081085 XLOC_041645 XLOC_047765 XLOC_035041 XLOC_154925 XLOC_127954 XLOC_023691 XLOC_074716 XLOC_131836 XLOC_095534 XLOC_107865 XLOC_086023 XLOC_084559 XLOC_028958 XLOC_025560 XLOC_043069 XLOC_109722 XLOC_073879 Coding TCONS_00068323 XLOC_041645 NonCoding NonCoding - 16:76930278-76932756 - TSS51166 2097 2 TCONS_00068323_3 70 0.254172627563185 2 0.154218813080339 0.00333781729928444 0.00183522071386015 0.00187045126510785 0.00175017884422513 0.00231232098090663 0.00156275959905044 0.00145688277934678 0.00273337602903188 0.0022374711506106 0.000256623708535217 1.95288537248109e-06 6.53801585021867e-30 0.000125472295948024 0.000668849080621884 0.000512923158951815 0 0 0 0.00419926387776938 0.00506182188900161 0.00132140216684732 0 0 0 0.00458188065002494 0.00634086744324733 0.00171357635818772 2.26321023135846e-06 2.54652875657061e-05 0 XM_005194808.1 LOC101905230 PREDICTED: Bos taurus uncharacterized LOC101905230 (LOC101905230), 1e-111 408 97.15 0.116833571769194 0 noncoding GTCTGAGGAGGAAGATAGATGGCTCAAGTTGTTTCTCTGACAGTGGAAGTAATAGCTATTGAATGTTATGTTTAGCATATCATAAAATCAGTGTTAGCAGACAAGACAGCCCTCAAGCCTTCCCGAAGTCCACATTCAGCCTTTTGACATCAGCAAGGAAAGGCCTGCAATGCAGCTCACCTGGGATGGATGACCTCGATTTAAACCAAATCAGATGAGACGGAGCTTCCCCTCGGCCCTCAGCCTGAAGTGGAAATGAACTTGGGGTGACTGGAGAACATCTTTCTTCAGCCCCCTCTGTACCTGCTCTCCCCAAGGGGCTCCTACCAAGCTCAAGCTTGACTTCATGTAGCACTGAAAACTCTGAGCTCTCCTTATACATGGAGGAGCCATGGACCAATTCAGGATCTCCTTGGAGCTGCTGAAAATCCTCATTCTTCTCACCTCACCAAAAAAAGAAATCTGCACAAGATGAATTTGAGAAAGGATTCAGATAGTCCTCCGTCTCTGCTTCCCAGGAGCTGTAACCGTGGCAGTAGTAACTGAGTACCACTACTCCTGGGCTTCACTGACTGCAAGAAAAGAGCCGTGGACTCTGAAAGAACTGGGCTCAGAAGAATGCAGGAGGATGACTAGGAAGGCAGATACATATGTCGTATTTCCTGAGAGGACTTGATTTACTGTGAATTTTTCTTCTTTTCTGTCTAAATCTCAAGGTAAAATCCCATCAGAAACCTCTGGCTTCCTCCCTGTACCATCAACATCCATCTCAGAAATGGGAAGAAGTGTCCTTTGCTCACAAAGTATTCTAGGAGCCACCATCTGTCCCTGCTGTTTGTAGAAAGAGAAAGTCCTCCAAGAAGAGCTCTGGGTCGGGTGGCTGAGCAGGGGTAAAGGCGGAGTGTGAGTAGGTGCTCGCGGAGGGAGACACTCACACGTCAGCAGAGGCAAGCTGGCTGTTCCTTCCCTGTCTTAGGTCCTGGTTCAAAAACCTTGTAGAGAACAGAAACATACATTGAGAATCTTCTTTGCAGAGGGCTCTGTGCTGGATGTTCTAAGAGGTATTAAAGGCAGCCCTTTCTCAAGGAAGCAAGGAGATACATACTCTCAAAATTAAGATGATGGCCAAGCAGTGCAGTATTCGCCCGCTCGCAAAGCCGGCAAACCTCGTTTCTCATGTCCATGACCAGTTTCCTCTCAATGAGCAGGAGAGGCAGCTTTAAAAGCCAGAGCTTTGAAATCGTAGGTACTTGACTCTACAGCCTACTTTGACTACTTACTTGGTTCTGGGATGCTGGGCAAGTTATCTTCAGCTCTTTGGGCACCGAGTTTCGTGACATTGAAAAGCAGACAGTCGTTGCGGCTACTCCATGGGAAAATTGAATGAGTTTGTGGATATAAAGCACTTAGCACAGCATATAGTAAATGCTCAATAAATGTTGGCTGAAAGGAAGTTGAAGATGTACCAGACACTGGGCTTGAAGCTGTCTACGCAGATGGCTAATGTGTTACTCTGCAGGAGTTTAGAGGACAATAACTCAGAGTCAAATAACTGCAGCAAAATGGCAAAAACACATACTAAGCTGCCTGTTCTTGTTAAGAAGCTGGAGATGACACAACGTCCTTTATTTGGATTGTTCCTTTTATAGAGATTTTTGAGAGGAGCCTGGTGGGCTATAGTCCCTGAGGTTGCAAAAGAATCAGATATGACTGAGCAACTAAGCATGTATGCATGCCCCAAGGAGAGAAGTTGGGCCTGTGATTCTAAACCATCCTATCCGAGTTTCATCTAAGGCGCAGTGCATGACCTGTGGACGTTAATGTGTTAATTAATTAAAACATTGCTAAAGTACTGTGAAGAAGGCTGAGCGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAGGGAATGATGTAAAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGG TCONS_00068324 TCONS_00068325 s 5' 113289 TCONS_00068324 TCONS_00068325 s 5' 115766 EMBV3_41744 CTCACCCTCTGGAAGCTTGGAGCAAGGAGGGAAAAGGTCACAGTCATAGGGGAAGGTATA Gene BVT0102_325819 + 1 EMBV3_40371 GK000007.2:18187954-18191584 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04167 TGATGGTGAAGGGGGGATTGTAGGCTGGATCAGGTTGAGAGTGGGTCCAAGTTTTAGGAG Gene BVT0102_103406 - 1 EMBV3_14353 GK000011.2:75130699-75141458 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028530 TCONS_00028534 TCONS_00025526 TCONS_00028532 TCONS_00028535 TCONS_00028533 TCONS_00028529 TCONS_00028531 2 XLOC_015496 XLOC_014782 Coding TCONS_00025526 XLOC_014782 NonCoding NonCoding - 11:75131067-75131671 - TSS18519 328 0.713414634146341 2 0.459369817578773 0 0 0 5.06350535391124e-05 0.00192328141601787 7.41285686197051e-05 0 0 0 0.000355001901513459 3.25518557830216e-05 0.00208582319445879 1.4443793519378e-05 0.00111981819967486 7.06638222997777e-05 0 0 0 2.18625817978158e-05 0 5.2035179112641e-45 1.6219954472754e-86 1.12228862936343e-135 0 4.51899209208342e-05 0 0 0 5.76060879575424e-05 0.000894430161271546 XM_005193961.1 LOC101908074 PREDICTED: Bos taurus serine/arginine repetitive matrix protein 1-like (LOC101908074), mRNA. 7e-92 340 100.00 0.570121951219512 0 noncoding 1 1 1 1 -0.192742047938691 0.489087772367705 0.036778398454881 0.68369962468821 AGCTAGGTGTGGGCTCACCTCAGAACTCAGCACCAACTTACCTGTGTACTTCGTCAGCCTCTGATTGAATCTGTGGAGAGATTTCCCTGCATTCTGACCATGTTGAACTTTACCTGAGACCCGAGATTCCGGAAAGCGACGGCTCCTAAAACTTGGACCCACTCTCAACCTGATCCAGCCTACAATCCCCCCTTCACCATCACTCGGAAAAGTAGGCTGACCTCCACATAAACCACCCTGATGTGCTGAGTGATCAACTGCCACCTCCACCCATCCATCCCCCTGGCCCTATGCCCAGTTCTGTGTAGTCTTTGTTCCTCCTCCCTCT TCONS_00028534 TCONS_00028534 r 5' 0 TCONS_00028534 TCONS_00028534 r 5' 0 EMBV3_30219 CACGGTTGGGCCTTTACCCTGAAGCAGTTTGCCAAGAAGGTGGAGGACATGATGAAAAAG Variant GeneID:281138|EEF2:NM_001075121:164_cdna 767^829 1 EMBV3_38859 GeneID:281138 7 GENE EEF2 EF-2 eukaryotic translation elongation factor 2 EMBV3_37191 GTAAGCCTGTGTGTGCCACTCTGCTTCCACAGTGTATCCTACTAACAAGCCTCACCAACC Gene GeneID:534122|NPEPPS:XM_002695921:292_cdna UTR3_Alt 2 NULL GeneID:534122 19 GENE NPEPPS NULL aminopeptidase puromycin sensitive EMBV3_24084 ACATGCCTGTATGTGTGCGTAGGAAGCCCCCTGGATGCCTAGGATAGTTGGATATCGGAT Gene BVT0102_093973 + 1 EMBV3_09597 GK000006.2:118025127-118129539 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27820 CTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAGGCAGCACCAAGGAAGC Gene GeneID:505313|CCT2:NM_001034239:22_cdna Constitutive 0 NULL GeneID:505313 5 GENE CCT2 MGC128852 chaperonin containing TCP1, subunit 2 (beta) EMBV3_37336 TGTAAATAACCTGACAATTAACATTAATATTTTACAATGCATTCAGATCTTGGGAAAATT Variant GeneID:513985|VPS37A:NM_001046161:49_cdna 471^585 5 EMBV3_33926 GeneID:513985 27 GENE VPS37A MGC137205 vacuolar protein sorting 37 homolog A (S. cerevisiae) EMBV3_15179 GAGCAGTTCATAGAGCACCTGTATCCGCAGAACTTTACCTTTTGACAAGTTGGTACTAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19512 GCACGTCAACCCCTTTCTCCCCTACATCAGGGGCAGCCACAATGTACACAAGGTATAAAA Variant GeneID:533992|DRAM1:XM_002687635:788_cdna 132^199 1 EMBV3_38012 GeneID:533992 5 GENE DRAM1 DRAM FLJ11259 DNA-damage regulated autophagy modulator 1 EMBV3_41983 GAGTTGGTGGTCTGTACTAGTTCTGCTGTGTGGATGCCAAGTATTCCGGCAGCATTTGCT Gene BVT0102_090506 - 1 EMBV3_04364 GK000017.2:63660160-63670248 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081388 1 XLOC_050268 NonCoding TCONS_00081388 XLOC_050268 NonCoding NonCoding - 17:63667186-63667983 - TSS61328 797 1 TCONS_00081388_2 68 0.820577164366374 1 0 0 6.30391564300955e-05 0 0 4.95576625167005e-05 0 8.7804939950482e-05 0 9.89980056549576e-06 5.16247740471024e-06 0 0 5.40014032153878e-05 5.90212740777091e-06 0 0.000198832808142441 0 3.14816603686157e-05 0 0 0 9.3107530949846e-06 0 0.000147242651741027 0 0 0 0 7.30930229895126e-05 0 NM_152355.2 ZNF441 Homo sapiens zinc finger protein 441 (ZNF441), mRNA. 9e-07 59.0 75.00 0.116687578419072 0 noncoding GTGGTCATATAAGCTATATAGATTTACAGCAGAATACAACAAAACCACAAAATTAAGAAAAGTATAAAGCTCACTCATCATACTATAATCCACATAGCCACTGAAAACATTGAGGTCTTCATGAAACCAACATTACAAAGGAAATTTAGGAACACTTGCTAAGTACACTAATATAAATATGGATATCTAGGAATAATATGAGAAAGCATATGTAACAGCAATGCAGGGAAAAACTATAAACTGTAGTTACAGAGTAATTAAAGAAGAAAATTAATGGAAAGAAGTTCCAAGTTTGTGGACTGGAATTCTCAATATTACATGGATGTCATTTTCCCTGAACTAATTTATGGAATTCTAATCAAATGCCTCCCTGTATTTTGGGTGAAAATTCACAAACTGAGTATAATATTAACATAGAAATAGACAGAGCCAAGAGAAGACATTAGTTTGGATAGAACAGAGTTTTCTACAAGACACTGAGAATTAATACCAGGCTATCATAATTAGTAAAGGTAATATTAAACCAAGGACACAAAAATTGATCAATGATATAACACAGGTTCACACACAGATGACTCTGGACATATGTCTGAAGTGGTTCTGCAGAACACTGGGGATGGACGGTCCCTTCAGCAAATGCTGCCGGAATACCTGGCATCCACACAGCAGAACTAGTACAGACCACCAACTCACACCCATTTGTCTGTGTTTTGATATGATAGTCATAAAGTCTTGCCAACTTTACGTCTTGAAGCTTTCTCCCTGTGTTTTCTTCTAGGAGTTTTTCAGTTTCGGCT TCONS_00077741 TCONS_00077742 . 3' 1113 TCONS_00077741 TCONS_00077742 . 3' 1909 EMBV3_14357 CAGCTACTAGCATTATATGTGGCTGCTCTTGCCTGGGAATAGTGGCCCTTGTGTTTGCCA Gene GeneID:511420|LOC511420:XM_002698064:36_cdna Constitutive 0 NULL GeneID:511420 25 GENE LOC511420 NULL similar to Snf2-related CBP activator protein EMBV3_22478 TGTTCCAGTGCCCGTATTTCTTCTTTGATGTTGTTTACATCCACAACGGCGCTGACGAGA Gene GeneID:504517|MERIT40:NM_001076801:20_cdna Constitutive 1 NULL GeneID:504517 7 GENE MERIT40 C19orf62 C7H19orf62 MGC139524 chromosome 19 open reading frame 62 ortholog EMBV3_00193 CACAGTGACCCTTGGAGTTCCTGCTTGGTGTTCTTACTTCTTCTTTGTGATAGCCACCTT Gene GeneID:618015|TMX4:NM_001099170:14_cdna UTR3_Alt 2 NULL GeneID:618015 13 GENE TMX4 MGC159915 TXNDC13 thioredoxin-related transmembrane protein 4 EMBV3_07947 AGACCAAGAGGAGCTGGAGGTGGACGTGGAGAGCCTGGTGTTCGGAGGTGAGGCTGAGCT Gene GeneID:533359|MXD3:XM_002689018:55_cdna Constitutive 0 NULL GeneID:533359 7 GENE MXD3 NULL MAX dimerization protein 3 EMBV3_01242 CTTAAAGATCGTGTAGATTGGGGCTGGGGAGGGATGAGGGGTGAGCGAGTCTAAGGATAA Gene GeneID:534799|TOP1:XM_002692463:512_cdna UTR3_Alt 2 NULL GeneID:534799 13 GENE TOP1 NULL topoisomerase (DNA) I EMBV3_41488 CCTGCGCTATGCCTCTGTCCACACAAACAATGTCATCATCAGGATTGGGCTGGCCATTGT Gene GeneID:785036|LOC785036:XM_002693402:65_cdna Constitutive 0 NULL GeneID:785036 15 GENE LOC785036 NULL similar to olfactory receptor Olr60 (predicted) EMBV3_32226 CCATTCACACACCATCACCAATTTGAAAGGACCATCCAGACCCCCATAGGATCTACGTGG Gene GeneID:505600|UTP14A:NM_001100302:172_cdna Constitutive 0 NULL GeneID:505600 21 GENE UTP14A NULL UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) EMBV3_10802 CAGAGTTCTGTGTGGTCCTGTGGGAGTATCAGTGTGGTTTGTAGGACGTGTTCCAGGAGA Gene BVT0102_218397 + 0 NULL GK000018.2:60712111-60749138 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43052 AGATCCCTTGAGGCAAAGGACAAGATGACCCAGCTGTGCGCTATCTCCTGGGCCGTGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33362 GAGACAAAAAAGAAATATTGACCTCCAACAATCCAGAAAAACAAAGATGATATTACAAAC Variant GeneID:523202|CUBN:XM_002692103:319_cdna 114^243 1 EMBV3_33539 GeneID:523202 13 GENE CUBN NULL cubilin (intrinsic factor-cobalamin receptor) EMBV3_15895 GAAGAATTCTCATTGTCTAAGCACCCTCAGGGAACTGAAGTCAAAGCAATAACGTACTCA Variant GeneID:613795|ZBTB8OS:NM_001076288:172_cdna 853^956 3 EMBV3_00496 GeneID:613795 2 GENE ZBTB8OS NULL zinc finger and BTB domain containing 8 opposite strand EMBV3_33411 TGGCTCAGTCTCACAACACTGTCCTTCATTTCAGACACGGATCACAGATCCCAGATTGTC Gene BVV0102_039910 + 0 NULL GK000003.2:61241254-62644404 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32159 CACGGTAGCTCTGCGTGAGATTCGCCGTTACCAGAAGTCCACGGAGCTGCTGATCCGCAA Gene GeneID:616819|LOC616819:XM_002697464:92_cdna Constitutive 0 NULL GeneID:616819 23 GENE LOC616819 NULL similar to histone cluster 1, H3f EMBV3_35893 CGACCGACGTCAGCTAACCAAGATGCTCAGGGAGCCCTGGATGCAGGGCCTGGCAAGCAG Variant GeneID:533158|C17H12orf52:NM_001046344:228_cdna 236^311 1 EMBV3_17573 GeneID:533158 17 GENE C17H12orf52 C12orf52 MGC138063 chromosome 12 open reading frame 52 ortholog EMBV3_26855 TGAGCAGAAAGGGTCCCACAGCTATCTTGGACTCAACTCCCAACAGGTGGAATACCTGAT Gene GeneID:507913|GOT1L1:NM_001038058:44_cdna Constitutive 0 NULL GeneID:507913 27 GENE GOT1L1 MGC134496 glutamic-oxaloacetic transaminase 1-like 1 EMBV3_42906 CAGTTCCTGCCTTCCTGGTGTGACTGTAGTGAAATGAATGTAGCAAACCCACCAAGGACC Gene BVT0102_148582 - 1 EMBV3_41262 GK000005.2:76312956-76388589 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12290 GAGGTGGATGAGGATGGCAGCGGCACAGTGGACTTTGATGAGTTCTTGGTCATGATGGTT Gene GeneID:509486|TNNC1:NM_001034351:130_cdna Constitutive 0 NULL GeneID:509486 22 GENE TNNC1 MGC128224 troponin C type 1 (slow) EMBV3_38384 TGATCACCATTATCTAGTCAAAAACATTTTCATCACCCCCAAGGGAGCCCCCATCCTTAC Gene BVT0102_107151 + 0 NULL GK000016.2:44482925-44541238 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43091 CCTGATGTGCTTTTGGTATCTAACCAGTGCCAACATCCCCTGTGAAGCCTTAAGTGGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37532 CGGTGGCCTTGGCCCGAACCAATACTGAGTCATGGCAGTAATACACTACTCCGCTCTATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43519 GAGCTTCAGAAACCCTTGGAACTCCCTGATTTGGGCTGTCTTTTGTATTCTGAGGAGCCC Gene GeneID:529660|OAS2:NM_001024557:213_cdna Constitutive 0 NULL GeneID:529660 17 GENE OAS2 NULL 2'-5'-oligoadenylate synthetase 2, 69/71kDa EMBV3_38909 AGACTGGAAGGCAAGTTTTTTGAAGAAAAGGAGATCAATGATCTATTGGTTAAAGAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05552 TAGGTTTGCTGGCTGCACAACTCCAGGGGCACTGTTCACATTCTGTTCTATAGCAGGCCT Gene BVV0102_219213 + 0 NULL GK000011.2:30670904-30722155 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18369 CTGTGGTGGGAAAATGGGGGCTGGGGCCAATATCAAATAGGTTGGGAGACTGGACGTTAA Gene GeneID:515550|GRIPAP1:XM_002700079:162_cdna Constitutive 0 NULL GeneID:515550 X GENE GRIPAP1 NULL GRIP1 associated protein 1 EMBV3_12838 AGCTGGGGGGCTGCACAGCCATCGTCCGCAACCTCGTCCATCACGGGCGATCTCTCAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10878 CATCCTGGTGCCTTTCATCGCCCTCATCATTGCCGGCTTCGTGCTTTATCTCTACAAGCA Gene GeneID:100139189|CSMD2:XM_002707687:585_cdna Constitutive 0 NULL GeneID:100139189 3 GENE CSMD2 NULL CUB and Sushi multiple domains 2 EMBV3_02934 GAGAACTGGATGATAATGCCTATATTTTTGCCTTATGAATTGTGCTGTATCATAAACCAG Gene BVT0102_034008 + 0 NULL GK000021.2:55162542-55179285 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121556 TCONS_00121554 TCONS_00121557 TCONS_00121561 TCONS_00121560 TCONS_00121559 TCONS_00121558 TCONS_00121555 1 XLOC_073430 Coding TCONS_00121557 XLOC_073430 Coding Coding KLHL28 21:55175030-55207518 j TSS90521 5342 1 TCONS_00121557_2 269 4 0.835688121402407 2.53889670524181e-05 4.17493300889202e-07 7.2075670176111e-07 0 0 1.95571575043737e-08 4.31770930002441e-05 3.42142776588177e-06 8.94345090175976e-06 1.16998381840087e-11 3.5865741291462e-08 1.0919368383726e-07 0.000187954431285952 0.000475700757729101 1.09452981098284e-27 0.00112758363385785 0.000860251364968389 0.0040462312831656 0 1.12886384017665e-07 5.51730281178591e-07 0.000766873041319959 2.6991134144641e-07 0.0025046973220096 4.08169829896698e-08 0 9.76042818587474e-13 7.85334963264051e-05 2.32117299357622e-05 0.000498351140013559 NM_001099030.1 KLHL28 Bos taurus kelch-like 28 (Drosophila) (KLHL28), mRNA. 0.0 1860 100.00 0.192811681018345 NM_017658.3 KLHL28 Homo sapiens kelch-like family member 28 (KLHL28), mRNA. 0.0 3036 82.32 0.575252714339199 TCONS_00121557_2 sp|Q9NXS3|KLH28_HUMAN KLH28_HUMAN Kelch-like protein 28; 0.0 570 98.88 0.996282527881041 6 coding 0 0 0 0 0.0419119897646042 0.735010771220394 0.0375915952842753 0.620153444857758 CGAGTTGTCCACGGCTCCTCCTCCTCCTGTCGCTGCGGGCGTGATTCCTGGGACTCAGTGTGGAGATGTACTTTCCTCAGAATGACTCTTGGATTGGTTTGGCACCCCTAAACATTCCTCGCTATGAATTTGGAATATGCGTTTTAGACCAAAAAGTGTATGTTATAGGTGGTATTGAAACTAACGTGCGTCCTGGCATCACTATCAGAAAACATGAAAATTCAGTAGAATGCTGGAATCCTGATACAAATACTTGGACTTCTCTCGAGAGGATGAATGAGAGTCGTAGTACCCTTGGAGTAGTGGTACTTGCAGGAGAACTTTATGCTTTGGGTGGTTATGATGGACAGTCTTACTTGCAATCTGTAGAGAAGTATATTCCCAAAGTAAGAAAATGGCAACCTGTGGCACCCATGACTACGACAAGAAGTTGTTTTGCTGCAGCAGTGTTGGATGGAATGATATACGCCATTGGAGGGTATGGTCCTGCCCACATGAACAGTGTGGAGCGTTACGATCCAAGTAAAGACTCCTGGGAGATGGTTGCATCTATGGCAGATAAAAGGATTCACTTTGGTGTGGGTGTCATGCTAGGCTTTATTTTCGTGGTGGGTGGACATAATGGTGTTTCACATTTGTCAAGCATTGAAAGATACGATCCTCATCAAAATCAGTGGACTGTGTGCAGACCAATGAAAGAACCCAGAACAGGAGTTGGTGCTGCAGTAATTGATAACTACCTTTATGTAGTTGGTGGTCACTCAGGGTCTTCATATCTGAATACCGTGCAGAAATATGACCCTATCTCAGATACGTGGCTGGATTCAGCTGGCATGATATACTGTCGCTGCAATTTTGGACTCACTGCACTTTAACTAGTGTGGACTTGTGGAAATAGTGTAGTGACGGACCTCGTGACGCATGAGAGGATGCCCAGGTTTCTGAAGCCACAAAGCTACACTGCTTTCTCTTTAACTTAAAATGGCATGAAGACTCAAAGTTTTGTTGGGTACTTTGAACTGACAAGTAGCTTTGATTGCTCTTGATTACATAGTGAATCAGTAATCCAAAAAAAAAAAAAAAAAAACCACAAAAAACAAAGATCTTGCCAACTGAATTGTGCACTTTTTTTTTTCCTGAAACTGGGATAGAATAGTTTTATGTTCATAAGTGTACATGTGGAAAAACCCTTGCTGCTTTTTAAAAAAATGTAGCTTTCTCCCTTCTCCTTGTTGTGCACCATGATGAGAGATGCTTAGATGCTGGAGTATACTGAGTCACTCAGTAGACAGGCTGATAGTCTGTTGGATATAAACTCAGATGCTTCACATTTTAAACAAACAAAGGGCTGCTCCCCACCCCACCCCACCCTATTTTTAAGGGTTGTGAATTACACACCTAGTGAATCACCTGGATTTTCTTCCTGCTAAATGGCTTTAGGGCTGGGGATATAATCAGTTTGCAAGATAAATGCATTTACTATCATGATTTGGAGTCCTGTTTAAGCAATCAATTTACTGTGTATGCCTTTTTTATATGGGCAGGTTAATGCTGGATGAATTTAGTTACCCATCTATGCTATGCTAAGCACGGATAGAAAGAGTTAAGCATATCCGTTTCAATTTCTTTTTATAGAAGTACGGCAGGCTTCCCAGTGTTGATGTAAATATTTGACAAATGTTGCCACCCTTAGTGCACATTGAGTTTTTTCATGTAACCTTACAATAATTTTAGTTTTTTAAGACTTTTGTTTGCTTTTTCAAAGTGTTCAGATATAAAAATGGTGCTAACTGTAGGATCTATTATAAGGCTGTGACAATGTTCTTTTGGATGTTAAATATGAAATATGCATGACATGTTTTTATAGTATTTTTCATTTTTACTAGCTTGGTTCATTTGTGCTTATTAAAAATGTTGGTGATTATACTAATATTTACATCCAAAAATTATTCAAGCAGCCTATGTTATGCTTTTCATGGTTCCTGAATAGTGATTTAAAGATATACTTTGTCTGTTTTTCGTTGTGCTGGATGTTATATGCCCGTCTTAAAAACAGAAATATATGCATTAAATATAAAGCACTAGGCAGTTAAGCATTACCTTATACATTTCTTAGGTAACTGAATATTTTAAAGTTATTGAGGAAAACTGGAACTCGATGTTTACCTGAGTAATGGTTCTAATTCAGTTCTCCTTTGACTAAAGAAATGATCTTTTAAAGTAAAATTGTTTGCTATAAGCTAAGTGACAGCTTATTTAAAAGAACTGACTAATTCATTTTGTTTTGCATGTTTTAGTAAATGTCTGTTAATCTTGAATACGTTACTTTGCATTAGAGTGTTGGTACTTGTATTTTTGGTACTATAGTAATTTTGTTTTCCTTATTTTTTTCTTTCGTTTTTCTTTTTTAAGACTGCCCACTGTCTCCTTCATAGTCTCTTTAAAACTAATATATATTTGTCTTAAAAAAAATTCATACTATATTCTTAAGTGCCATAATGTTCTGAACTATTGTTAAGAAGCCATTTATAATGATAATACATAGGTTCATTTTTAGGATATGTGTTATTTCTTGAAAACTACTTATAGCCGGGCAGTTTTCCATTTTCCTTGTTCTTCCATAAACTGCCAGTTGTAGATTTAAATATATACTACAAAACTATGTGAACTCATCTTTAATCATATAGGTAGTTTCATGCTTTATAAATATTTGCACAGATTATAAAACCTTGCAAGTGAATTTTAGTCTCTTTCTAATTAAGAACTCAACAAGAGCTACTAATAAAATTGACAGGCTGAATATTTTCTATGTTGCTTGTTTGAATAACTTAATGATATATAGCAATAACTTTTTCATTGATTTGAATAAATCTGTTGAATAGAAACAAGGTGCACTATTGTGACTGGCCTAGATTTCATTTAAAGAAAGCAGTTTAAAGCAATTGAAAACAGATTGCATCACATGTGTAATTTTAAATCCCCAACTCCACTTTCTTTCTGTTTCAATCAAAAGAATTTTTTCTTGATAATACTAAAAATGTTAATCAATAGTTAAATACATCCTATTCCAGGTTTTTAATTCCCTCTCCCCAGAAGATAAGGGAATTTGAAGGACTAGAAATTTATTTTAATTGTAAACCAATCTATACTATACCTCTCATTTTCACAATGTTTTCTGTACATATCATTCCCACTGTCGTGTTATTATAAAATATATAATCATTTGGTAAATTAGACCAAAGGCATAAGTTGATCACTGTTTTGGAACAACCTAAATTTCATCTCAGTGAAGACTAAATGTGAAACATCTTGGGCAATAGTATGAGCCATATCCTAGAGAACCAATTATGAAAACCTGGGAAAAGGAAGCGAAAAACCCCTCAAATTTAGAAATATTTATGTTAGGCTTGCTAAACCTACTTTACTGTCATAACAACCAGAGGTATCGTGACCTGACAGCTGATAACCTTAGAACAGAGCCTTCTTGTTCACATTTGTAAGAGGTTTCATCATGAATACTTTACTGACAACTTGTGAATTTAAAGCCACATTTCTTTACGTTAAAAAGGATCAAAATGTTGTAATATAAATTTCCAGAACTGAAGATTTTAGAAATAATTTTGTACACTCAAGGAAAGGCAAAGGCTATTTAAGATTGCGTAAACTATTTTGGAAAAAAGTACAGTGGGAAATAGAAATTAATCCAATCAGCTAGAAGACAATTGCCCTCTGTAATTATGATAAGACTTAATCTGTTAGGAATTTTTTAGCCATTTAATATTTGTTGACTATAGTCATAGAACTCAAGTGATTAATGTAGTCCAAAGGATAGTTTAGTTATGTAATTTCCATGTTATTGCTAATACTGTTTTACACATGAATGAATATTACTTTCTAGGATGTACTATCAAGTAATAGGATGGCATTAGGTTTTGAAAAGTTATTTTGGTAACTTGATGAATATGGAGGGTCTACTGTACATACAAGATACTGTGCTAGATGCTATGGGAGCTAGGAATATAAAGCAAATATAGCCTCCATTCAAAGAGTAAAATATAGTGAGGCAGACTTATACCCAAATAACTGTTATGGTAAAGGGTGAATCTAATTCCTTATTTCCAACATCATGAGAAGTGATCAGAGATCCAATTTATGTATAAACATTTGTGTCTTCTAGTGTCCAATTAGGTTTTATTGACATGACATAAAATAGAATTATGTAAAAAACTAATATTTATATAACTCCAGCTTTCCTAAAATTGGATGATATATTTTCTAGTAGAAATACAGAACTATAGAAAATTTTAAAAATATTTATTATGCTTTCAAATCTCTGGCTGACTTTGAAGGAAAAAATATGTAAATATAATGCTGTGTGTTTTCAGTTTTGGTGTTGGATTTCTGGTATCGTCACCTAAGTGCTCATTTTCAGGAAAATCAGATTCTACAATAAATATACTGCTTCAAGTTCAATAAACTTGTGATAACCTCTATAACCTCTGTAGTTTGAAAGTTAAGAACTTACAAAGATGTCACATGTCAAGTTAACATCCAGTTCTACTTCTTAACCTTTTTTTCCTTTGTAAAACAGCACTTTAATTAGACATGATTTAATTAGATACAGTTATTCTATGGCTGCATATATATTAGATTTCACTTACAGGATGTTGATTCAGTGTTGATATACATTTGAAAAGAGTGAGGAAAACAGTAAGTTTTGAATACTATAGGTTTACAAGTTTTCTTACTGGTGTGAATATGGAGTTAAAAATCCAGTTTACATCTCTGCAGAGAGAAAAATTGTTATCCATATGTCTTTTTATCGTATACATATTTAACTAGAGATAATTTATTGTTAATTTTGTCAAATTATCATGTGTAAGTCCCGTTTATTTTAAAATACTAAGCAAAAAGTTCCAAGTTTGCCTTAAAAACAAGTGAAATTAAAGAACTGGATGATAATGCCTATATTTTTGCCTTATGAATTGTGCTGTATCATAAACCAGAGATGGTTTTGATTTTAACAGGATTATGAAATTTTGTAGATGTAGAGTACTAATATTTGTACTCTTGCAAAGAATGTGATCTAGTTGTGGATTATGTTAGTGTTTAAATGTTTTTGTATATGTATTTTACCTCTGAATATGTATCTTTTTAGCATCAGGGTTTTATTTTATTTTTGTTTACAGAGTAAAGTGGCATTTAACTTGTTGAAGGTTGTATTCCTTTGTCTTTTATTTTTAAAGTTCTTTGTGTGTACTATTGTGGTTATGCTCTGTATTGACTATGGTTAAATTTCATTTAATGTGAAATATTTAAAATAAATACGAAAAACAAGAATG EMBV3_34495 ACCCGGTTGCTCTATGGGCACTTGTGAGTTCTCTGTTCACACTGGGGCTTCTTGGACAAA Gene BVT0102_097654 + 0 NULL GK000026.2:22143613-22197460 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150468 TCONS_00150469 TCONS_00150470 TCONS_00150467 TCONS_00150463 TCONS_00150466 TCONS_00150472 TCONS_00150465 TCONS_00150464 1 XLOC_091882 Coding TCONS_00150464 XLOC_091882 Coding Coding BTRC 26:22001601-22178040 j TSS112702 7690 1 TCONS_00150464_3 660 15 0.956500300388805 0.00218301320871405 0.000465523307271578 0.00178689048714181 0.00109698625212381 0.00198046614410232 0.000459802474119934 0.000707297494840747 0.00068102971468177 0.00135920857799009 0.000166474861084442 5.43354158892894e-05 0.00011078381254828 0.000234639964542774 0.000110370604593172 0.000306435279895687 0.000780000637733671 5.68120670245897e-06 0.000135372914285554 0.0010966781030359 0.00271885768358998 0.00132937921556369 1.85942951491374e-10 0.000288673770152109 0.000520601965893544 0.00269106334560513 0.00197281762560778 0.00216034166210391 1.07716110963237e-08 8.74622996442583e-06 4.20803671773695e-12 XM_005225564.1 BTRC PREDICTED: Bos taurus beta-transducin repeat containing (BTRC), 0.0 1.185e+04 100.00 0.854616384915475 NM_033637.3 BTRC Homo sapiens beta-transducin repeat containing E3 ubiquitin protein ligase (BTRC), transcript variant 1, mRNA. 0.0 4607 88.76 0.458257477243173 TCONS_00150464_3 sp|Q9Y297|FBW1A_HUMAN FBW1A_HUMAN F-box/WD repeat-containing protein 1A; 0.0 1259 99.67 0.915151515151515 5 coding 0 1 1 1 0.10153065953468 0.546200903771928 -0.00144675159158794 0.975706998967241 CACAAATCCCGTGAGCCAGCGGGTAACACGCATGCGCAAAGGACACCTTGTCGTCCCTGGCCCCGCCTGCCAGTTCCTGAGAGGTAAGAGGGCGGAGGAAAGGAAGAGGAGGCGGGATCCGGGCGCTGCGTTGGCTGCGGCCTGGCACCAAGGGGGCGGCCCCGGTGGAGTGCAGACCCAGTGGCCCCTGGCGATTATGGACCCGGCCGAGGCGGTGCTGCAGGAAAAAGCGCTCAAGTTTATGTGCTCTATGCCCAGGTCTCTGTGGCTGGGCTGCTCCAGCCTGGCGGACAGCATGCCTTCGCTGCGATGCCTGTATAACCCAGGGACTGGCGCACTCACAGCTTTCCAGAATTCCTCAGAGAGAGAAGACTGTAATAATGGCGAACCCCCTAGGAAGATAATACCAGAGAAGAATTCACTTAGACAGACATACAACAGCTGTGCCAGACTCTGCTTAAATCAAGAGACAGTATGTCTAGCAAGCACTGCTATGAAGACTGAAAATTGTGTGGCCAAAACAAAACTTGCCAATGGCACTTCCAGTATGATTGTGCCCAAGCAACGGAAACTCTCAGCAAGCTATGAGAAGGAAAAGGAACTGTGTGTCAAATATTTTGAGCAGTGGTCAGAATCCGATCAAGTGGAATTTGTGGAACATCTTATATCCCAAATGTGTCATTACCAACATGGGCACATAAACTCATATCTTAAACCTATGTTGCAGAGGGATTTCATAACTGCTCTGCCAGCTCGGGGTTTAGATCACATTGCTGAGAACATCCTGTCATACTTGGATGCCAGATCACTATGTGCTGCTGAACTTGTGTGCAAAGAATGGTACCGAGTGACGTCTGATGGCATGTTATGGAAGAAGCTCATTGAAAGAATGGTCAGGACAGATTCTCTGTGGAGAGGCCTGGCAGAACGAAGAGGCTGGGGACAGTATTTGTTCAAAAACAAACCTCCTGATGGAAATGCGCCTCCCAACTCTTTTTATAGAGCACTTTATCCTAAAATTATACAAGACATTGAGACAATAGAATCTAATTGGAGATGTGGAAGACATAGCTTACAGAGAATCCACTGCCGAAGTGAAACAAGCAAAGGAGTTTACTGTTTACAGTATGATGATCAGAAGATAGTAAGCGGCCTTCGAGACAACACAATCAAGATCTGGGATAAAAGCACACTGGAATGCAAGCGGATTCTCACAGGCCACACAGGTTCTGTCCTGTGTCTCCAGTATGACGAGAGAGTGATCATAACTGGGTCGTCGGATTCCACGGTCAGGGTGTGGGATGTAAATACAGGTGAAATGCTGAACACATTGATTCACCATTGTGAAGCAGTTCTGCACTTGCGTTTCAATAATGGCATGATGGTGACCTGCTCCAAAGACCGTTCCATTGCAGTATGGGATATGGCCTCCCCAACTGACATCACCCTTCGCAGGGTGCTTGTCGGACACCGAGCTGCAGTCAATGTTGTAGACTTTGATGATAAGTACATCGTTTCTGCATCTGGGGATAGGACTATAAAGGTGTGGAACACAAGTACTTGTGAATTTGTACGGACCTTAAACGGACACAAACGTGGAATTGCCTGTTTGCAGTACAGAGACAGGCTGGTCGTGAGTGGCTCATCTGACAACACAATCAGATTATGGGACATAGAATGTGGTGCATGCTTACGAGTGTTAGAAGGCCATGAGGAATTGGTGCGCTGTATTCGATTTGATAACAAGAGGATAGTCAGTGGAGCCTATGATGGAAAAATTAAAGTGTGGGATCTTGTAGCTGCCTTGGACCCTCGTGCGCCTGCAGGAACTCTTTGTCTACGGACCCTTGTGGAGCATTCTGGAAGAGTTTTCCGACTCCAGTTTGATGAATTCCAGATTGTCAGTAGTTCACATGATGACACAATCCTCATCTGGGACTTCCTAAATGATCCAGCTGCCCAAGCTGAACCCCCCCGCTCCCCTTCTCGAACATACACCTATATCTCCAGATAAATACTCATACACTGACCTCAGACTCACCCAGGACTCATTAAAGTTGCGGTATTTAACATATCTGCCAATACCAGGATGAGCAACAACAGTAACAATCAAACCACCACCCACTTTCCCCGGACTAGCCGAGGAGCGGGGCTTTAAGACTCCTATTGGGACACAGTTGGTCTGCAGTCGACCCAGGATGGTCTACTCAGCACAGCTGACTGCTTCCGTGCTGCTATCAGAAGATGTCTTTTATCTTTTGTGAATGATTGGAACTTTTAAACCTCACCTCCCCTCCTCCTCTCCCCTCCGCACCTGTTTTTTCCTCATTTGGTTCCAGACAAAGATGACTTATAAATATATTTAGTGTTTTGCCAGAATCTCTCTTGCTTTGCTGTTAAGCAGAAGAACTAGTTTCCCTGTGTAGCCTACTGGGAGAGAGCCACTTCTAGGGGACAGGAAACGCAGCTTCAAGCCAGACAGCACCCAGTGTCTCCCTGTAAACTGCAGGCATGCCCAGCACCCAGCAGGACCTGCCCCAGCCCCACTGTGCTTAGGAGGAGGCAACTGTCTGTTTAGCCTCTGGGGCAAGAAAGAAAGAAAACAAGAATATATGCCCTGGAAGATCTGGGCCTCTTTCCTTCCATCTCTTTCTCTGTTTCTGTCCCTCTTGCCCCTTGCTGCCCCACTCGCCTTCAACATGTTTCTCTGCTCCACCTGAGAAGAAAAAGTATGAAGAAAGTATCCTCAGTTATCATGAGGCAAATGAGGAAATGCAATACTTAGAAGAGTTAAAATGCTCTTCAGTCAAAATTTCAAACCTAGGCTTTGGCCGCAAGTGACCCTTTGTGGCAGCAATGGATTCTCAAACATGGGACTCATCATATTTGCAACTCTTCTCTCTTCCCCTTGTTACACAGCCCACCCCTACCCCCAGAAGGGAGGCGGCAGAAATTTCCTGGGCTCCATCAATGGCCACATCTTTTCTGGACTCAGCAGTCTCCTGGATTCCATGTAGAGTGTGGAAAGGAGTTGCTGATTGCATTTCCTCTCATTAACAATTAGATGTGTAATAAAAAGCATTGTACTTCATCTTAAATCACTGCTAAGGCTCAGCCTACTGAAAGAACTGAAATGGCCGGAGCCAGTTGCTCGGTACTTTGCATAATGGTTCGCGTCTCTGATTTCTTCATCAGGGCCTGCGAGTACCCAAAGCACCTGTCTCTTTGCCAAGACCATGATCAGACTAGCTTACCAGGTGGTCAGGACTAAAAGGTGATGTCTTTTTCACTTAGGCCAGTAAATATCATCCCTCAGAAACCAAGCTAATCATCTCAGCCTTGCACTGCAGAACTTTCCTTCTGCTTTTCCAAACCTGGTATATATAAAAGGCAAAGCTGCCAGAGAGAGAGAATCAGGGTGAAGTTTGGCATACAGGGTTTATTAATGGTGCAGAAACTGCCTTCTCTTTATTTTTCTTCCTCCTCCTGGCCTTATTTTACTCTCCACTCTCCCCAGCCAATAAAATTTCTCTGGCGGTTGGTGAGCAACATAAACAAATGAACTTCAGCAAGGGCCAAGGCTGACCAGTAGGAGCTTCAGGTGAGGGCATGTGTGCCCCAACCTGGGAGCACAGGGAGTACTATCCACGTGTGCCCCACTTGTTTCCAGGTCAGGAGTGGGCCTGCACCAGCCATCTCATGGGACACAGACACACCCATCAGTAGCCGCAAGGCCCAGGGCAGTCTCAAGGGTCCCTTGGAAGCTGAGTTGACAGGCCCATTGTTTCCATACTAATCAACGCAGTTGAGTAAAAGAAAAGCCTCTCTTAACCAGCTGGTGTAAAATTTCAGTGGGAGCCTGTAGCAGGTGACCTCAAAGCCAGGCCACTTTAGTTCAGCAAGGGAGGTGGGGAGAGAGAAAGCCATCCTCACTCTTCCCTCTGCTTTGCCAGAAGTAATCCTCTTTCCAAAATGTGCTCAGACTGAATGTTTTTGTGTAGTGAGAGGCAGACTGTGCATATGCATTTGTCCTTTCCTGCTTTATGAGTGCTTTTAAGCTTTTAGTAACAGGTTATAGAGAGAAAATATTTTCCAATGTAATGATATGTCATTGCCAGGGAAATATTTTCTGAGTATAATACCCTTACCAACTACCCACATGCTAGAGAAATGTCTTCTATTTAGCCACTATCAGGGTTCCTTGTCTATTGTCTTGACTTAATGGATTTTGATTGGTTAAGGATTTTCTATAGATGAGGCAGAGGGTTGACCACCCTGAAAAACACCCAGGTCAGGCACTAAAGAGGCAATGGATTTTGAACTGTTTCAAAATATTGTCCAGTAGCCATAACTTTACCAGCCCTTCTCTTATATGCTGCTATTCAGAAGTGGAACTGCGGAATAGTCATTGGTGCCTGGGGGTTTGCTCGCCCCTAGAGGTTCAGTGTAAGCTATGTTGTTTCTAAGACCATTTTGAGAGCTTGTCCAGTACATCATAAATGAGATCAAGAGTGGACCCTGCAGTCTGAAGCCCATCAGCTCCATCAAGGATATTCTGCAAGTTGTCCTCTGCTCCTGTTGGAAATGGGAATGGAGTTAAGTGGTCTGAAAAACTTGAGTCACATTTCTCAGCTCTGGGGGTCATTTACCAGTTCATTGTAGAAGAAATAATCAGGTAAGTAGAAGTTCATTTCCAGAGAAGGTAAATCCCACTTACCATCTCTGCATGATTTCAGTGGGAATTGATTATCACTAATCCCCAACTGGGCTAGAATAAATGTAAAGTTTGACCTTTTTAAAAAGAAAAGAGAAACAAAGAAGTCTTAACACCTCCAAAGAAATGGTAGAAAAGGAAGTGAAGGTGTCTCTGGGCTCTTCCCCATTGTAGATTAGTCTCTTCTCACTAAAATTCCAGTGTGGGCCTGCCAGAAACATTTCATAAAGATAGAGGAATCGTGTTCAAAAGCAGGTGAGGAGCATGTGCATGCCCCTGCACCCGGTTGCTCTATGGGCACTTGTGAGTTCTCTGTTCACACTGGGGCTTCTTGGACAAAACCAGCATGCCTTGCTACGTGTGTGTATTTCCACTGCTGAGAACATCCTTTTACTTCCCTATGTGCAGTTTGAAAGTGGACATGAATTGTGAATGGGAGGCCTTTTACACTTGTCTCTTGGCAAAATTCTTTCCAACCACTCTTTACCAGAAATTTCAGAGACAGACTCTCTGGAATTCTACTGACAAGTAATAAAGTCTGGCCCTCATAACTTGTTTTGGGGAAGGATCCTGGGACCCCTAAATCATTCTGTTTTCTGCTTGAGTAAGAAAAATCCTTTTTTATTTTTATTTTGTAAAACCAAAAGTTGAAGAGAAGAAAATATGCACTCTGCCATTTCCTGGTACCCACTGGTCTGAACAGCTGTGGTTACTTAGCACTTGGTCATATGTGGAAATTCAGGGCTTTGGGTGGAGTGGTCGGGGAGATAGAATATTAATAACTAGGGCAACGTTTTCTTCCCTAGAATTATACACTTTGGTACTGCTGGCCTTCTTGGCATCTTACATGGTAACACCTTCCTGCCTAGAATAGTGCAGGCCAGAGAGGCTAGGCTGCAAACTTGGTTCTGGAGGAATCCAAGGTACTTCAGGTGTAAAAGGGGCTGTTTAGATGCCCACCACCTGTCTGATGATCAGGTTTGCCATATGACTTTAATCCACATTTCTGATCTCCTCCTCCATTTCTCTGAGTTCAACAGACTTCCCACGATCTGGAGAACATGAAAGGGTGCCCTTGCTTTTCTTTGCCTTCCTCTCTTCCCTTCTAGAGTAACCCTCACTTCTATCAAATGTACCCGAACCTGCAGGCTGAGTTCATCTCCCCAGACTTAATCCACACAGCTGATCGCTGACAGACCACAAGCCCCTTTCATTATCCATAGACTCAACATAATCTGTGCCAAAAAGACAGCCGTCTCTTAGTAGAATAAAGCTGAGTTTTGCTTCTTGTTATTTTTACCTGTAGTTCATTTGTGACTTCAGAATCCTTGAAATTGAGGAGAGAAACCAAAAAAAGTGTGATTATGGCTACCTGATTTCAGGTGGAACTTAATGCATTGATATCCAGAAACCTCTTCTGTTGGAAATTGAGTACCTATGATCTAAAGTTTCCTGGAGGTGGATGACATCTGCCAGCATCTCTCCAGCCCACCCTTAGCTTCCGATTGGTTCTGTGGTTGTGTGTTCAAAGGTCAGTGCAGTAAACAGCATTATAAAGCATCACCTCCCCTCTGTCCCTTTCCCTTTCTTGAATGTTGATGGGGGAAAAAAAAATACAAGGTTAGATCTCTGGGTACCAAGGACACTAACACTTTCCCAAATCAGTGATCACTCAAGCCCAATGCAGACTGTTCTGAGGGATGTTCACTTGACTCCAGCTGTGGGGCAGGCCTGGCAACAAGTGGGAGCCTCCCTGAGAGCTTTTGCTCAGCCTTTGTTCTCTAGACTCTTCAGTACCGACTGCTTTGACTTTTGTGATTATGTCATGGTGATGTGTAGTCAATGTACCGATATGTTCACAACCTAGAATCATCATAATATAGTGTGTTTTTTTTTAACTGTTCAGGAAAAAAAGGTAACTTAATTACAAATATAAGATTAAAGTGAATTTTCTGGGTGTCTTGTCTCTTTACCCCAACATCAAGAGGACAATGACTTTTTCAATATAGAAATTGAGGGAGTAAACAGAGACCTTTTAAAGAAAATCTGATATGAAAAAACAACATTGAGAAGAGTCAGGGCCAAATGATATGAGTAAATGTGGGGACCCAGGCGTACAATTAAGTGTTCCATGTTGAATTAAAGCCAAGGTGATGTCTAATTTGGGAACTGGTCACCATAGCCTTGCCCAACCAACCTGAGCCCAGAGCTTAAGTTTTCTTCTGCCTCCTTATCAGGTGAAAAGACTTGGGTTTCCCCTGCATCCCATTTGATCAATTTTGAGATGGGAGAGCTCACATTTGGGACCAATTTCCAGAGAGATTCCAACAAGCTATAAAAATGAAGGGAGGAAACTCACCCTTCTTCCCTGCTTGAATCAAACCTAGGGGAGTGGGTACCAGGTTGCAACTAGACCCCTCCCTTCTGGTGTCACAAGCAAGAACCTTGGCAAAATTAACCCATCCTTGTTTGCTGTCTATGGGCTCTTAGTAGTGATCCTTCCTGCCTGACCAGGCTCCCTGGCTTGTGGTCCCTGGATTGACAGCTGCAGTCATTACAGCCTTCTCGGGCTGTTAGATGACAGGACCCTGGTGCCGAACTATCCTTGCTAGAACAGGAGCACGTCAGGAGCTAGAACAGAGCATCAGGTGCACCTTGACATTGTGCAGATGAGGAATGTGAGGAACAAGAAAAGGGGCTCTCCACACTGCCGAGACCACACTGGAGTCTCCTCCCTGAGGGTGAAGAGAGAAGGGGAGGAGTCAGCAGAGACCACTGGGGCCACTGGCATTGGCTCAGTGGTCGCTTGTAGGCTGGACTTCTGAGCCCAGAATTAGGCAGAGGCTGGGCCTCGAGGATTATGGGTCTCACCCTGAAAGCCAGTGTCAGATCATTCCCCACAGGAAGACGGGTCTAGGGCACACTTTGGAAAACACCCTGAAATCACAGTTTCCTGAAGCAGTGCTGGGTCTGGAC EMBV3_10835 GAAGACATTGTGAACATAACGACCTTGTGGGAAAACAGACATGCCTTACTGAGTTAACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20253 GACGTCCGAGTTCCCTGCACACCTGTTGCCAGGTTAAACAACCACCGAGCATGCGTCAAT Gene GeneID:516678|DCAF7:NM_001038125:254_cdna Constitutive 0 NULL GeneID:516678 19 GENE DCAF7 MGC134591 WDR68 DDB1 and CUL4 associated factor 7 EMBV3_13390 AGAGGGTCAACTTGATTTCCCTTAATGGTTTCTGTGAATATATTGGAAAATGGAAGGATA Gene BVV0102_272162 + 0 NULL GK000006.2:79313832-79355028 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03559 CTTAGGCAAAATCCCACCTGTGTAGTAGGCATGTAACATCATCATCTGTTCAGTCATCTC Gene GeneID:777776|LYZ:NM_001078159:52_cdna Constitutive 0 NULL GeneID:777776 5 GENE LYZ LYS LZ MGC137103 lysozyme (renal amyloidosis) EMBV3_29942 CACGAATGGAACACCCTGCTCTATGTGTCAAGGAGATACTTGTGAAAACAACCTCTGCCG Gene GeneID:615034|GLIPR1L1:NM_001076357:17_cdna Constitutive 0 NULL GeneID:615034 5 GENE GLIPR1L1 MGC133885 GLI pathogenesis-related 1 like 1 EMBV3_03747 TCTTTCAGCCATCTTGGACCCTGTGAAGGCCTGCGGGGAACGGGACTTCTAAAATGACAA Gene GeneID:100297498|LOC100297498:XM_002692436:435_cdna Constitutive 0 NULL GeneID:100297498 13 GENE LOC100297498 NULL similar to ribosomal protein L35a EMBV3_26166 GCCAGTGAGGCAGAATACCGACAGCAGCAGGGTCCACAGGGAGAGGAGGCCCGGAGCAGC Variant GeneID:508203|ZFAND2B:NM_001098906:65_cdna 766^869 2 EMBV3_26055 GeneID:508203 2 GENE ZFAND2B MGC165690 zinc finger, AN1-type domain 2B EMBV3_28476 CCCTGAACTAACAATAATTACTCGAGACTCTAAAGCAAAAAGTGGGGGATCTGCTATGTC Gene GeneID:537018|LOC537018:XM_002693518:261_cdna Constitutive 0 NULL GeneID:537018 15 GENE LOC537018 NULL similar to glutamine and serine rich 1 EMBV3_09401 AGAGCCCATGGTTCTTGGCCAGCAGGACATTTGAGAAAAAGGGTCTTCAGTCGGTTGGAC Gene GeneID:539606|PYCR1:NM_001014957:123_cdna Constitutive 0 NULL GeneID:539606 19 GENE PYCR1 NULL pyrroline-5-carboxylate reductase 1 EMBV3_43044 CAGAATCCGAACTCCTCAGCCAAACACTCAAATTGCTCCATCATCTCTGCTGGTCCATCC Gene BVT0102_090328 + 1 EMBV3_21347 GK000002.2:120397262-120465973 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15350 CTCTCTGGTCTAGTGCAACACAATTAAAAGGGTTCGAATCACCAAGACAATGAGGGGTTT Gene BVV0102_212854 - 1 EMBV3_25214 GK000009.2:19368401-19480888 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05609 ACTTTGTGCGGCTTTTCCTGCCCATCCTGGAAAACGACAGCATTGCCAGCACCCTGAAAA Gene GeneID:512775|LOC512775:XM_002687818:114_cdna Constitutive 0 NULL GeneID:512775 5 GENE LOC512775 NULL similar to Negative elongation factor C/D (NELF-C/D) (TH1-like protein) EMBV3_06106 GTGAATGACATTTCACTTCTTTGTTCTGCTGCATGTGGCGTGGACCATGCAGATTTCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02435 ATTAAACCGAGCTTACGGCTCACGCCACTGACCTGGACCCCAGCAAAAAGCTGATTGTCT Gene BVT0102_081730 + 0 NULL GK000003.2:16395089-16404891 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39678 CACATTTGATAATCAGTGAGACAGATAAATAATCATAGTGTGTTTCATGGAAAAGCTTTG Gene GeneID:525303|GGH:NM_001105394:28_cdna Constitutive 0 NULL GeneID:525303 14 GENE GGH NULL gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) EMBV3_31691 GACAGCGGATGTTACAGGTGGCATCTCAAGAGTTCTATCCGGGACCCCCCATGATGGACG Variant GeneID:507060|WBP2:XM_002696174:148_cdna 450^584 1 EMBV3_21247 GeneID:507060 19 GENE WBP2 NULL WW domain binding protein 2 EMBV3_28154 CCTCATTCTGGGCCCAGAGATAACGAATAACTAGAAATGCTGGGATGTAAAAACCTTTAC Gene BVV0102_313240 - 1 EMBV3_03620 GK000002.2:35567323-35960129 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28244 CTCGAGAGACAGCTCCTTCCACCTGCAGAAATCCTCCGTGCAAACATCAGACTCAGCTCT Gene GeneID:100335598|LOC100335598:XM_002690625:14_cdna Constitutive 0 NULL GeneID:100335598 10 GENE LOC100335598 NULL hCG2039694-like EMBV3_15679 GCGGCGGTGGTGTCCAGAGGAGCATGACCGACATGAACAGGACCTTCCCCGACAACGTGC Variant GeneID:100125303|GRTP1:NM_001103336:20_cdna 153^311 1 EMBV3_42674 GeneID:100125303 12 GENE GRTP1 MGC159770 growth hormone regulated TBC protein 1 EMBV3_15265 ACCGTACCCTGATGGGCAACTGGAACCAGGAAAGGTATGACCTAAAGAATATCGTGCAGC Gene GeneID:538766|MGC134087:NM_001038177:110_cdna Constitutive 0 NULL GeneID:538766 15 GENE MGC134087 NULL hypothetical LOC538766 EMBV3_05445 CCATAGGGCTACCTGCACCTCTGGATTTTGGATTCACAGACCAAGTCCAAGCCCGTTCTT Gene GeneID:539315|ACVR1B:XM_002687257:109_cdna Constitutive 0 NULL GeneID:539315 5 GENE ACVR1B NULL activin A receptor, type IB EMBV3_17408 TCTGCCACCCCCAAAGTGCTGAGGTATACAAACTCATCCATGTTGTGCTAACAGACGGCC Gene GeneID:100336530|LOC100336530:XR_083868:274_cdna Constitutive 0 NULL GeneID:100336530 15 PSEUDO LOC100336530 NULL formin binding protein 4-like EMBV3_42085 CCAGGCACTGAGCGTGTTTCTGATTGTAACCCTAATGGTGTCTCACTTGGAGGACGCAGA Gene GeneID:538868|RGSL1:XM_002694223:107_cdna Constitutive 0 NULL GeneID:538868 16 GENE RGSL1 RGSL2 regulator of G-protein signaling like 1 EMBV3_03588 GCAGATGCACACTTCAGAGCCAAACAGGATGAAGGCTCAGGGAAGCGACTTCAGAGGAAT Gene BVT0102_086779 + 0 NULL GK000023.2:10132303-10166998 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18884 GGAAAACCTCAAGTGCCATGAGTCCATCCTACAGTAACAGAATAAGGTGGCTGACACTTG Gene GeneID:512325|SLC25A38:NM_001014905:86_cdna UTR3_Alt 2 NULL GeneID:512325 22 GENE SLC25A38 FLJ20551 solute carrier family 25, member 38 EMBV3_31048 CCAAGGACCTGAGAGTCACACAGCCACCGCTCCAATTCCTTCTTCAACTTCCCAGCCTTT Gene GeneID:100137734|PILRA:XM_002698210:778_cdna Constitutive 2 NULL GeneID:100137734 25 GENE PILRA NULL paired immunoglobin-like type 2 receptor alpha EMBV3_30072 AGATCAAGGATACTAGTGGAAAGGCCAGCCAGGACCCTAACAAACGAGTGACTTCCCAGA Gene GeneID:100297474|LOC100297474:XM_002696343:23_cdna Constitutive 0 NULL GeneID:100297474 20 GENE LOC100297474 NULL similar to ubiquitin-like protein fubi and ribosomal protein S30 EMBV3_15294 GCGATTTGGGATCCTGAAGGAACAAAGAGCCACTCTCACTTTCAACAAAGGAGGAAGCCG Gene GeneID:407149|FYTTD1:NM_001001137:23_cdna Constitutive 0 NULL GeneID:407149 1 GENE FYTTD1 MGC139576 forty-two-three domain containing 1 EMBV3_28086 TTGGCAAAGTGCCTCTGGATCCACGCATAGGAATCCAGGAGTTCTGTAGTCAGCGTCTGC Variant GeneID:507007|NUBP1:NM_001075295:81_cdna 819^902 1 EMBV3_13520 GeneID:507007 25 GENE NUBP1 NULL nucleotide binding protein 1 (MinD homolog, E. coli) EMBV3_31223 CAGTCACAAAGCTTGGACACGACTGAAGCGACTTAGCCTCTGCTGCACAAGGATTCATGT Gene BVT0102_327806 + 0 NULL GK000030.2:64404732-64507206 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18759 CCCTGGGGTTGCAAAAGAGTTGGACACGACTCAGTGACTATGCAACAGCACAACAATGGT Gene BVT0102_336373 - 1 EMBV3_39043 GK000017.2:64426504-64443982 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11243 GCCCTGCTTTCCTGAGATGTTTGATCTGGTAGTAACTATGGTAACATTGCAGCCCTAAGC Gene GeneID:615798|PKIB:NM_001114518:14_cdna UTR3_Alt 1 NULL GeneID:615798 9 GENE PKIB NULL protein kinase (cAMP-dependent, catalytic) inhibitor beta EMBV3_25973 GCAGTCTTCTGGATTGAGTTTATCATGCGTCACAAAGGAGCCAAACACCTTCGACCAGCC Gene GeneID:781988|LOC781988:NM_001101281:50_cdna Constitutive 0 NULL GeneID:781988 6 GENE LOC781988 NULL hypothetical protein LOC781988 EMBV3_20679 AAACTGGCAGAGTTTGTGATGGGTGCCTCTAAGGTCACTGAGTTCCTGAACTGTGTGGTC Gene BVT0102_368769 + 0 NULL GK000005.2:47905609-48164006 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23330 TAAGAGCGTATTTACAGGTAAAGCCTTGTCATCCAGAGTCAGGAGCCCCTTGGGAAGGTG Gene BVT0102_216899 + 0 NULL GK000017.2:70601694-70643237 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078065 1 XLOC_047214 NonCoding TCONS_00078065 XLOC_047214 NonCoding NonCoding LOC100847235 17:70604781-70607322 = TSS58174 1399 1 TCONS_00078065_1 125 3 0.450393700787402 0.000894727636957596 0.00119230975690898 0.00156769041820724 0.00189350967550953 0.000779925703764056 0.000501145815905037 0.000496050001627184 0.000879386148499096 0.00175398981629277 0.000276456676342122 4.74527364750468e-05 0.000138018028240255 0.000246114143769778 0.00036313859924092 0.000476942859636563 0.000906189114177759 0.000320394217800785 0 0.00113279213000707 0.00103322274113148 0.000505592902007545 0.000318257038035026 0.000288532797100916 0.0003834659854471 0.00188193152380481 0.000936710484835486 0.00308662394798784 0.000123583885364846 6.24609671277555e-05 4.2975317153561e-05 NM_001039570.2 KREMEN1 Homo sapiens kringle containing transmembrane protein 1 (KREMEN1), 2e-176 623 76.87 0.58541815582559 0 noncoding 0 0 0 0 -0.218521561882281 0.171721125929479 -0.00331391224026175 0.96087436711733 TTAAGGCCGCTGTCCATGAGTGGACAATTCATTTCAGAGGAGAAGGTGACTACTGACCAAACTTCTCAAAGGAGAGACTGGCCTTTCTTTCCTCAGCAGCCAAGTCAGGACACTTGGGCAGCACCTTGTTCTTCACCTACCAGCTGCATTCCAGAAAACAAGGAACAGCTACCGCTTATTGAAAACATACCACAGGTGTGCTGTGCATCTTACGGGAGCAGACACTGGACTGACCGGCCTGAGGCCACCTCAGACCCGGGGTCCTGTGCCCTCGCCTGTGGCCGCCCTGTGGGTGTGGGATCCCAACTCTTCAGACCTCACCACTCGGAGATCGGCTGGGGGTCAGAGGCACAGACGAGAGCTGAGCGACTGGGAGGCAGTGACCTGGGGTAAGCCTGCGGTCCCCTAGCACAGCAACGTCCTGGCCCACGGTCTTGGGAGCCTCCTATAAACACAACAACCCTGGGCCCATCGCAGTTTCTACAACAATGAGAATATTTATTTTCTCCAGACGGTAAAAATAACATTTTTCTTTCTTTTGTAAAAGTTAAGTACCATTACATTCCATTTTCTTAAATAACAAAATCCTAAAAATATATATTAAATTGTATACAGTGCGTCACACTTCATCTTATATTTTAAAATACATGATGTTTCTATTTTATTCTCAAAGTTGCATATTAAGAGCGTATTTACAGGTAAAGCCTTGTCATCCAGAGTCAGGAGCCCCTTGGGAAGGTGAGTCTGGGTGTGGGCGGTCCTGACGCCGTGAGGACCCCGCGGCAGCAGCCCCCACCCCCACCAGGTGCTCCTGGCGACACGTCCTTTCTGAAGCAGCAGACTAACCTGGACTTTCCCCCACACCCCACTGCTGCCTCATTGAGTGTGTTCAACTCGGCAAGACGGGAACCTAGGAGATGGGCCCCCCGGGGTCTGCAGGCCGAGGGTGAGGCCCCATCCCCCTGAGCTGGCCAGCCTGAGCGGAGGCAGCTGCGGCTGGAAGAGAAACACCCCACACCAGGGCGGCTAAGCTGAGAGCCCCAGCCAGGAGGTAGAACAGTGAGGAAGGTAAACGAGACACCAGAGGAAACAATCAGAAGGTTAAACATTCCCAAGGTGGCAGCAAAAGCAGACATCAAACAGCAAGAGAGACTGGGAACCAAGAGGGCTGCGGGCTGTGGGCCGGCCCGGCTCCACGGGAGGCCGGGGTGTGGTCAGACCAGGGGCCGACCTCAGAGGCCGTCCACCTGCAAGTGCTCGGGAAGATGAAGTGCCAGGACTCACAGAGGCGTGGTGACACTGGGGTCAGGACGACCTGGCTGGATACGGAGCAGGCAGGTCCGACCACTCCTGCCAGGGGCTGACAATGGGCAGGGAGGCAGTTGGGGAGGGGGTGCCT EMBV3_06397 CAAGCCTTTCTCCTGCTCCCACTGCGGCCTGAGCTTCGGCTGGAAGAAGAACCTCACCAC Gene GeneID:527301|ZNF467:XR_083662:531_cdna Constitutive 0 NULL GeneID:527301 4 PSEUDO ZNF467 NULL similar to zinc finger protein 467 EMBV3_26906 TAGACACCCTGGGCATATTTGGCGACATCTCGGTGACAGCCGTTGGATTCCTGAACATCA Gene GeneID:518931|LGALS12:XM_002699372:305_cdna Constitutive 0 NULL GeneID:518931 29 GENE LGALS12 NULL lectin, galactoside-binding, soluble, 12 EMBV3_13436 TATTCATTGCTGGCGTCGTGGTGAACACCCTGGGCTCCATCATTTACTGTGCGGCCAAAT Gene GeneID:539925|SLC35D3:XM_002690269:69_cdna Constitutive 0 NULL GeneID:539925 9 GENE SLC35D3 NULL solute carrier family 35, member D3 EMBV3_04541 AATGTGCAGCCTGGGGTGAGAACCAATGCCCTAGACCAACTACATCATTTCACAGATGGG Gene GeneID:526835|NEURL2:XM_002692485:575_cdna Constitutive 0 NULL GeneID:526835 13 GENE NEURL2 NULL neuralized homolog 2 (Drosophila) EMBV3_19061 GCCAGCATTCACTGGGACTGGAAAATTGCCCTGCTATTTGTAGCGTTTGCCCTCTGTATG Gene GeneID:533008|LOC533008:XM_002692963:96_cdna UTR3_Alt 2 NULL GeneID:533008 15 GENE LOC533008 NULL similar to solute carrier family 35, member F2 EMBV3_27786 CCCAGCACTTCCGGGGGCACACGGGGGCGGGTGGTCTTGCAGAAGTGCAAAGTCAAGTCT Variant GeneID:767863|FBXW2:NM_001076974:2_cdna 709^842 1 EMBV3_03006 GeneID:767863 8 GENE FBXW2 NULL F-box and WD repeat domain containing 2 EMBV3_03142 CTTCGGGGAAGCAGAATACGCTGCCATCAACTCCATGTTGGACCAGATCAACTCCTGTCT Gene GeneID:616015|C11H9orf16:XM_002691630:316_cdna Constitutive 0 NULL GeneID:616015 11 GENE C11H9orf16 MGC137074 chromosome 9 open reading frame 16 ortholog EMBV3_18360 AGCAGGTTCAAAACCATGTCTTCTGCCTGTAACCCAGCAGCTCAGGGGCAACTTAACCAA Gene GeneID:785640|TMC7:XM_002698015:162_cdna Constitutive 0 NULL GeneID:785640 25 GENE TMC7 NULL transmembrane channel-like 7 EMBV3_09820 TTCCGCCCAGAAGGGCCAAATGAAGCTAGGAGACGGCGTCTCCAGGCACCCGAGCTCGTT Gene BVT0102_435539 - 1 EMBV3_24643 GK000004.2:114433470-114438014 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190353 1 XLOC_116388 NonCoding TCONS_00190353 XLOC_116388 NonCoding NonCoding - 4:114434517-114435506 - TSS142721 989 2 TCONS_00190353_3 67 1 0 0.000866693304150038 5.08009760479156e-05 3.74277818853226e-05 0 0 0 0 0 0 0 9.95299342169977e-05 0 0 0 4.9607678822719e-06 0 0 0 0.000130512334551893 0.000814397839337457 3.06949100376018e-06 0 0 0 0.000224177249134449 6.41144062848181e-05 0 9.71200944214671e-06 1.47257832332076e-05 0 NM_001199692.1 anion exchanger Homo sapiens solute carrier family 4 (anion exchanger), member 2 3e-51 206 76.74 0.302325581395349 0 noncoding 0 0 0 0 -0.0216702270589418 0.833647524366258 0.0701337167526148 0.167034049947862 CACCACCTTACAGAGCCCCGGCCCACTGGAGTCGGCCAGGGTGTGGCCCTAGAGCTGGCAGGTTGGTTACCGCCCTCAACAGACAGAAGGACAGACAGAAGCTACACTTGAAGCGGCCTTGACCTCATCCCTTAAGGAGTTGATTATAGATTTATCTTGTGGCTTCTCTCTAATTGTCTCATGATTGCATTCTTGAGGGCTGTGAACTGGATGAAAACTGCCCTCAAACAGCACTCCTCGGCGCCGCCGGAACCGACGTAGGGGCTTAAACAGTTTGTTAATTAACTCGTTTATGTCTGAACGTTTTCTGCGTACACAATGCTGTCCTTCCCTCGGTGGCAGACTCTCAGAAGCGAAACATAGATTCGCTTATCTGGAAGAATTTATAATTTAAGAAAACAAGAAATAGATCTTTAAATGACAGGTGATGACTATGAGTAGGGTTCGAGAAAGGAGGTCATGGCAGGGAATCTCTCCGAGGCAGAAGTCCCCCGGTTCGGAAAGACTTAGCACAGAGCAAGGGGTATCCAACCCGCGCCGCCATCACCGCTCTTCGACCCCACCCCCGTCCTCCTGGCAAAGATAGGGGCTTTCTTGGAGGCACTGGGGACTACAAAGGGTGGAAGGCTGGGGCTGCCTGCGGGCGCTGAGAGATTCTTGACCCCCGATGCATTGATATTTCAATTTCCTCCGAATTGCCTAATAGCTTGGTGCCTCTTTTTTTTTTTTTCCCCCCTGCCTGGGATTCCTAGGATGAGGCGGGCTTCCTTTCCGCCCAGAAGGGCCAAATGAAGCTAGGAGACGGCGTCTCCAGGCACCCGAGCTCGTTGCGGGGAAGCGCTGGGCGGCCGCCTCCCGCCGCGCGGAGGGTCAAGCCAGGGGCGGCCTCCTTGGCTCTGGGATCCGGGCGCCGCGCAGTGCTTGGCCGCGCGCCTCCGCCCCCTGGGTCTCGGCCCCACTCCCCGCCTCCAGGCCCGCCGCGCCGGGAA TCONS_00182906 . 5' 144 TCONS_00182906 . 5' 144 EMBV3_21923 TCCATCACTTCTTCTGTGATGTTAAGCCATTGCTGGAGTTGGCCTGTGGAAACACTGACC Gene GeneID:785811|LOC785811:XM_002697381:24_cdna Constitutive 0 NULL GeneID:785811 23 GENE LOC785811 NULL similar to olfactory receptor, family 12, subfamily D, member 2 EMBV3_05023 AACCGTGGTTTCGTCAGGGCTGTGCGTCCTCTTGAGCCTCAGCTTCTTCATCTGTGAAAT Gene BVT0102_352419 + 0 NULL GK000006.2:105015211-105105247 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210651 1 XLOC_129161 NonCoding TCONS_00210651 XLOC_129161 NonCoding NonCoding - 6:105101931-105103211 - TSS158158 1280 1 TCONS_00210651_6 203 0.06015625 1 0 0 0 0.000122904610809707 7.136375707561e-05 0.000200572441622443 0 0 0.000124763567365323 0.000129447445055555 0 0 2.79350501979429e-06 2.24162708402573e-06 1.83750036833155e-05 0 0 0 0 7.28297924252153e-05 0.000258441027515982 0 0 0 0 0.00010825747464886 1.6512822455293e-05 1.83099005368628e-05 0 0 0 XR_231461.1 LOC101906527 PREDICTED: Bos taurus uncharacterized LOC101906527 (LOC101906527), 5e-133 479 100.00 0.20625 0 noncoding 0 0 0 0 -0.0144565744829998 0.933962937419567 0.0285631728185666 0.539651972732603 ATTTGGTTAAAGATTGAAATCGTCGGGCAGATAGACCTGGAAACCGCGAGCCGCAATCACCCGACACCTTCAGAGAATGTTTCTGAGTCCCGCACGACGCCAGTGTGCTCGCTTCACAGAGCAAGTTGGAGACAGAGCAGGGATTTGAACCGGGGTCAGTAGACTTGGAGATTTTTCTCCTCGTGAAAGCGGGGGAAACATCAGGGAGAGGGAACGCCAGGCATTGGACCCTAAGGCTCATCTCCCTTTAGTTGGTGGTCACCAGAGCCACTGAGGGAAGATGGATGGATAGACGACCCAGCTGTGGGATATATATGGTCAGGTGCTTGGAGAACGGAAACTGGAGCACCCGAAGGCCGGAGAGCCATCGCCTCACCCCAGAACTCCATGTCTGAGCACTGCCCAGGTCCCAGGCCACTATGGGTACTGGGGTCCCTGTTTGGCACTCCCGCCCCACCCCTGGCCACGGTGGGCGCGACAGACTCACTGTGAAAATTAAATCAGTTATGACGCCAGGTAGCGAGCATTCAATAAACATTCGTCGTGTATTATGAGTTTTATCATTATCATCATTTTTATGAACCCTTCTCCCCTTAAATGTTATGAGAGGCATACAGTGAGGGAGCCAGTTTGATCTGGACGGAAATCTGGGTGAGGGGGTTCGTGGAAGAATGGGGGCTGGGCCGACCTGTGGCTGCTCCGACTCAATAGTGGGTCTCTTCCAGCCCCCATCCTCACACCCCCGGTTTTCTGTCCGGGGAGCTCGGGAACTCTCCGTGGTCCTGAATCTGGCGCCTCGCGGAAGGTCTACAGTGCGCGGGAGTGGGGGCGGGAGGGGGGCAAGGAAAGGACATATCGAGAGGGTCCCGTCTCCTTGTCCGTATCCCTTTTCTATCTCTCCCTCCCCACTTCCTTCCCTGCTGTCCGACCTCACTTGCGATCCAGGATTAAGAGCCCGAGAAGGAGGCTTCGGGGGCCGCGGACCTAGAAGCTGGGGCCAATACGGGAGAACCGTGGTTTCGTCAGGGCTGTGCGTCCTCTTGAGCCTCAGCTTCTTCATCTGTGAAATGGGGGTGGCATCTCCCAGCCTCCCTCATGGCGTGGTGGAGTATCAGGGAGGCGAGAGAGCTTTGTGCACAGCCGGGAGCTGTGGAAGAGCGTCCATCAGGAGCTGCGGTCAATGTCACCAACGCCAGCATCGGCCCTGGGCTCGGCCCCGGACGGCTCTGCAGCCGCGCCTCGGCCCTTGGGGACGCTGGTCGCTTCCTCTTCCACTGCTC TCONS_00204048 TCONS_00204049 . 5' 2037 TCONS_00204048 TCONS_00204049 . 5' 2037 EMBV3_10637 GAGCAATCAAATGGAATTCTTTGGGCCTGGAATCTAGTAAAGCAAGGGCACCACATGGCC Gene BVT0102_369411 + 0 NULL GK000024.2:43967108-43983879 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139139 TCONS_00139136 TCONS_00139140 TCONS_00139135 TCONS_00139131 TCONS_00139137 TCONS_00139134 TCONS_00139133 TCONS_00139138 1 XLOC_084810 Coding TCONS_00139140 XLOC_084810 Coding Coding RNMT 24:43942239-43973777 j TSS104119 8697 1 TCONS_00139140_2 477 0.310911808669656 11 0.724577480419824 9.61148718701054e-05 6.97432649693265e-58 7.93975363721594e-21 6.70479176404563e-16 1.11811142932857e-73 6.37681086124916e-33 6.66931053527161e-18 2.02096690864121e-28 6.5615423037484e-27 2.03049554406735e-13 3.28072985795394e-16 6.77899527161446e-84 1.55748383384271e-45 1.64629904825536e-52 1.56713753870883e-10 0.00131248062134447 0.000853511939818556 0.00221842811134942 3.91547887814284e-31 7.6140184756191e-16 4.78437661196861e-51 1.04223092372904e-05 5.85437224626522e-05 0.000287011965338275 1.96476336707827e-16 1.72046173373509e-47 6.82360264585661e-18 3.8999505908009e-06 1.23567900036073e-14 3.1668931955461e-10 XM_005224156.1 RNMT PREDICTED: Bos taurus RNA (guanine-7-) methyltransferase (RNMT), 0.0 3800 100.00 0.242152466367713 XM_005258162.1 RNMT PREDICTED: Homo sapiens RNA (guanine-7-) methyltransferase (RNMT), 0.0 2269 81.85 0.263539151431528 TCONS_00139140_2 sp|O43148|MCES_HUMAN MCES_HUMAN mRNA cap guanine-N7 methyltransferase; 0.0 838 86.19 0.9979035639413 5 coding 1 0 1 1 -0.31582576198042 0.164183959160821 0.0108363545037778 0.813813356076348 GGACCCAGCCCGGGTTCGAGAGGTCCGAGAGCCGCTTCAGGCCCGGCCGTCTACCGGAGCGGCCGGCCGCCTGCCCTGCGTGGTGGGCCGGAACCTGAGCCGTGCGGTGCTGGGGCGGCTCGGTGCGTCCTCGAGTCCGAGGACACCATCGGCCCACCTGTGGGTCCGGCGTAGCGCTCACCTGCTTGAGCTCCAGCCCTCAGCCCGGTGGAGGGCTCACACCTGAACCTCGGGTGTGACTGCTGCGCAGATCACCGAGAGTATCAGTTCATGAAGTTTGACCATCATTTAAGTAATCAAAAATGGAAAATTCTGCAAAAGCAGAAGAACATGAAAAAATCTTTCATAAAGAAGTGAAAACATCATTAGATTCAGAAACAGAGTCATCATTCATTATTAATGAAAATACAGCCTTTCCTGAGACTGGTCTTTCTGCAGAGGCTCCTACTTGTGGGCAAGTAAACACACCAAAAAAGAGAAAAATGGAGTTTGAGGAGGATCTTGTAAAGGAAAGTTCTAGCTGTGGGGAAGACACTCCACCCAAAAAAAGAAAACTTGATGCTGAAATTGCCCCAGAGGAAAAAGGTTCTGGTGATGATGAAGGCATTTCAAGGAGAAGAAGAATAGAAACTGATGGTTTTCCAAAAGATGAACCTGCTGGAGATGGCACTCAGAAAAGGAGAAAAATAGAACTTGAAGATGTTCCTGAAAAGCAAAAGAACTTGGAAGAAGGACACAGCTCAGCAGTGGCCGCTCACTACAATGAACTCCAGGAAGTTGGTTTGGAGAAGCGTAGCCAAAGCAGAATTTTTTACCTAAGAAATTTTAATAATTGGATGAAAAGTGTCCTCATTGGGGAATTTTTAGAAAAGGTGAGACAGAAAAAGAAACGTAATATCACTGTTTTGGACCTAGGATGTGGTAAAGGTGGAGATTTGCTCAAGTGGAAAAAAGGAAGAATTGACAAGCTAGTTTGTACTGATATCGCTGATGTTTCTGTCAGACAGTGTCAGCAGCGGTATGAGGACATGAAAAACCGTTGTCGTGATAATGAGTATATTTTCAGTGCTGAGTTTATAACTGCTGATTGTTCAAAGGAACTCCTGACTGATAAGTTTCGTGACCGAGAAATGTGCTTTGACATCTGCAGTTGTCAGTTTGTCTGCCATTACTCATTCGAGTCCTATGAGCAAGCTGACGTCATGCTCAGAAATGCGTGTGAGAGACTGAGCCCTGGAGGCTATTTTATTGGTACCACCCCCAATAGCTTTGAATTGATAAGACGCCTTGAAGCTTCAGAAACAGAATCATTTGGAAATGAAATATATACTGTGAAATTTCAGAAGAAAGGAGATTATCCTTTATTTGGCTGCAAATATGACTTCAACTTGGAAGGTGTTGTGGATGTCCCTGAATTCTTGGTCTACTTTCCATTGTTAAATGAAATGGCGAAGAAGTACAATATGAAATTAGTCTACAAAAAAACATTTCTGGAATTCTATGAGGAAAAGATTAAGAACAATGAAAATAAAATGCTGTTAAAACGAATGCAGGCCCTGGAGCCATATCCTGCAAACGAGAATTCCAGACTTGCCTCTGAGAAGGTTGGTGACTATGAACATGCAGCGAAGTACATGAAGAACAGTCAAGTGAAGCTACCTTTGGGGACCTTAAGTAAATCAGAATGGGAAGCTACAAGTATTTACTTGGTTTTTGCATTTGAGAAGCAGCAGTGAGCACGTCACACGTGCAGTGGCACCAGAGCAACTGTGTTCTGTCTTATACAGATTTGAACGGTCCACCTTCCTGAGATCTGACGCCCTTGTTAAATGTAACTATTCTCAGCGGGCTGGATGCTGCTGGAAACGTCAGTGTATAAATGGAACTTTTGCTGTCTGTGACAGATGAACTTTGTGTGTGTATATAAGAATGAGATGGGACCTTTGTCTTTAAAAATCTATTTTTAAGTAATGTTCTAAGAATTCCATTTGCCTCCACTCTGGTAGCTCATAAAAATTATGAAATGACGTGTTAAAGCCTGAGTTCTTTCACCAGTGCTCTGCTTCGTCCAGTGTTTATTTACAGTATTAAACGTATTGCAGTTGTAGAATTGGTGGGAGTGTACTAATTCACAGGGATGTGTGCTCATTTCCGAAGTTTTGTTAAGTGTTTTTCAGGGTTAAAATAATTGCTCTCTGTACAACTGAATGTCAGTGTTCAATATAAGTTTAAAACTAAAATTTACATGGTGATAAAAGTTAATTAACTTTTAACTTAGCATTCTAGCCAGTTATTTAAATTTCATTTTAGATAGCAACTAGTTCATTTGCTAACATGATTGAGTTCTAGAACTGGACAAAACATTTCAGATTCCAGCATAAAATTGTTTTGCATTTGGGGGTCTTTCTCATAGGAGTTCCCGATGATAGCAGTTAATGTTTCTAGTTATCAAGGATGTAATTCATTTCTTTACTGAACCAGAATGCTGTGGGTATTTTTCTCAAGATTTAGTGGCCATCTCCCATGTGAACCTGTTTGGACATTTCCCTCAGATTTATATAAGGTGGGGGATGGGGGGCAGGGGCAAGGATCTTCTGGGATGGAGGCGTGGGGCTGGGCCAGTGGGCAGTGTGTGGTTGTGAAGGGAGCTGACAGAGAGGCTTGAGGGATCCTTCTGATGGAGGTCTGGGCCACGGCGCGGTGTGCTGTTGATCCGTTCCCCTCTTTGGCCCAGAAAGAACCAGTACGTGTTCCTCCATCATAGCATTATGCTTGGCGCAATAGGATCTGGTGTCTCATCCCCACTTGAAGTTTGCATTTGCCATTTCAGAACCCTTAAGAGTTGTCAGCCCTGGCTTCTTGCATGACTCTTGCGAAACTGACACCAAAGTGAACTGTTGTCCTTGATTTATCACCACTTAGAAAACTTACCAGTTTTGATATATAGCAAAAAATTTAAAAAGCAAAGCAGAGAATTTATACATACTCTTTTAAAAATCATTTCTTTCATGCATGGTTTTAAAAGACATTTCCTTCTGTGATTATCCAGAGTACTTGTTAAAAAACTGTTGTCTCTTAGTTTGTTTACATGTGTTGGTTGTTCATCGTGTTAGAATAGCAGACATTTCAGCTATTAGGTAACACAGGTTACCTCATTTCTGTTCTTTCCACAATCTGTCCATCTCCAGCTGTTACCAGTTTACAAAAATGTGGTGGTCCACCGTAAGTTATTGGAGGAAATAAATAACAGCACTTCTGACTGGTGGCTGCCATTGGCCAGCTGAGGTTTGGTGACGGTGCTGGGAGGTGGGCTTGTGAGCTCTTTAGTATTACGTCAGTTCTGGGGGAAAGTGCCAGAAAGTACTGTGATAGTTTGGTATAGAATGAAAAGCTTCTCTGTTATCATTGTCCTCATGTAGTGATCTCAGTGTATTCCAAGCAAGTAATAAGACATATTTTTAGCTGCCTCCTGCTCTCTCCATTCCATGGAAAATTTGGGTGGAATAATTTGTGGTGGCAAAGCCAAGTGGAAAAGAAGGATAAAAAGGAGCAGAGAGAGCTGGGTGGGCTCTAGAGTCTGAGCGAGCTGGTGTGTGCTCGGAGGTGCTCGGAGCCTCCCCGGAAGGTGTGGCGACCTGGCCATTGCACTTTGCGCGTTTATGACATTGCCTTCCCTGCTCTTCCTCCCTGACATCTCCTGCTGCAGCTAGTGGTGGGCAGTGACTGAAGAAGAACTCCCATCACCAGGGTAAAAGCTGATGGGACTTCCTACACACATTTGCAGTCTAAATATTTGGTGATTTTCCATCCAAGACATGAGGAAACTGTTAGGAGAGGGGGCTTTTCATTATCAGGCCAGTGATGTCAGGCGCTCATGGGAGTGACTGAAGGGTACTTTCAGACCTGCTATTAGGTTTGTCCTCTGAGAATGGAAGTAGAAATGAGGATCAGATACAGCCTCTGTGGAAAGAAGTTGGGAAGAATGGACTGGGAACCTGGCTGGTTGTGTGTAACTAAGAGCAATCAAATGGAATTCTTTGGGCCTGGAATCTAGTAAAGCAAGGGCACCACATGGCCAGTGTGAAGGGGGAGAAACTGGCCATTTCCCACTGCACCAAAAGGGGAGTGTCCTGACCTGCGGCTGCAGCAGCCTACCAGGTGGCAACCATGCCCTGAGGCCACCAGGCCTCCACTCCAGTGTAATTCCCCAGAGAAATGTGCATCCAGGGAGAGAAGAATTGATTAGAGGCTGTGATGACTCTTGAGAGCTAGATTATCAGTGCAGGGTTTCCTACTCACCCCTCCCCAAACTTGGAATTCTGAGAAGTATGATTGCTGTCTACGTTCATGTTAATGGTATTTCTAGAGCATCAGAGCAAAGAGGTACAAGTGAGATGGGCTTGGAGGCAGGGTGTGATACGGGTCAGCACAGGAGAGACCGCAGGAGCGTTGTTGGCTGTCCAGCTCTGCACTCCCTTTAGCTCTTTTGGGAACTGATTCAGCCTGTCTTAGCTCATTGTCATTGTGTTGTTTGGTAAGTCTTCAAGTATCCTTCTAATGAGAATTTGGCTTCCTGTGCAAATCTTTGTACGGGGAAGAACTGCCAGTGTAAATATTCAAGCTACTGAGCATGACTTTTATGAACTGACTTTGTGTTGTCTACCTCTGCCTGAGGCCAGACCCGGGGAACGTGGCCCTGTAATCACAGTTATACCATAATGCCTGTGATACCTACTGTCCCTTTAGTCAAACAGGAAGCATGGGTGTATAATCACTACCTCCCTGGTCGACATCAAATGCTGCACATCTGATAGGAAGCTTCTTTGTTTGCCGCCCTCTGGCAACATTATTCCTGATTCTTTGAAGGTAGTTGATACAGTGGCTGCTACACTCATTTATTTAGTGATAGACTTATTTCAGCAGATATACACGGGACTGGAGTTGGTTAACAGCCAGCTCTTCACCTCACATCCTTCTCTGTTCCCTTTAGCCTGGGCATGTATGCCTACTTCTCAGTTCAGTTCAGTCACTCAGTCGTGTCCGACTCTTTGCGACCCCGTGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAGACTCACGTCCATCCAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCTTGCCCCCAATCCCTCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAGAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGACTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGAGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGCGCTCAGCTTTCTTCACAGTCCAACCCTCACATCCATACGTGACCACTGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAATGTTCCTTCCAAGACATAAGTGTCTCTTAATTTCATGGCTGCACTCACCATCTGCAGTGATTTTGGAGCCCTCCAAAATAAAGTCAGCCACTATTTCCACTGTTTCCCCATCTATTTCTCATGAAGTGATGGGACCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGATTATTGATATCTCTTCTGGCAATCTTGATTCCAGCTTGTGCTTCTTCCAGCCCAGCGTTTCTCATGATGTACTCTGCCTATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGACGTACTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATTTAGGTTTCTGCATTTAGGTATTTAGGAATACCAATCTCTTTCAGAATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCAGAAATAGATGTTTTTCTGGAACTCTCTTGCTTTTTCCATGATCCAGCAGATGTTGGCAGTTTGGTTCCTCTGCCTTTCTAAATCCAGCTTGAATTCTGGAAGTTCACGGTTCACATATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTAGTGTGTGAGATGAGTGCAATTGTGCGGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTGCAGTCCTGTGGCCACTGCTGAGTTTTCCAGATTTGCTAGCATATTGAGTGCAGCACATTCACAGCATCATCTTTCAGGATTTGAAATAGCTCAACTGGAATTCCACCTCCACTAGCTTTGTTCGTAGTGATGCTTTCTAAGGCCCACTTGACTTCACATTCCAGGATGTCTTGCTCTAGGTGAGTGATCATACCATCGTGATTATCTTGGTTGTGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTGTCCCTTATTGTGCCCATCTTTGCATGAAATGTTCCCTTGGTATCTCTAGTTTTGTTGAAGAGATCTCTAGTCTCTCCCATTCTGTTGTTTTCCTCTATTTATTTGCATTGATTGCTGAGGAAGGCTTTCTTATCTCTTCTTGATATTCTTTGAAACTCTGCATTCAGATACTTATATCTTTCCTTTTCTCCTTTGTTTTTTGCTTCTCACTGCACTACTAAACAGGTATGGGGCACTCAGCAATACTCTCCCAGGCTGGCCTGGCAAGCCACAAATGGAAAACATGCATACAGTCAGCACCTATATCAAACAATGTTCCCAGCACCGTGGAAGTTCCTTTCTCCCTTTTAGTTGCTGCCTCCCATGGGTAACCACTGTCTGGACTTCCAAGAGCATGGGACAGTTTTGTCTGTTTGGGGACATTTTATGAATAGAATCAAACAATATATTTTCCTTTGTATTGGCTTATTTGCTCAACACTATGTAGATTTCTGTTGCATGTATTTGTACATGGTTGGTTTTCATGACTGCATAGTATTCCGTCACATGAATAAACCACATGTTATTTATCTAATGGATGTTTGGTTCATTCCCAGTTTGGAAATACTATTAACTCATTATTGACTGGGGGATTTTTGCAGAAACTAATAATGCCTGTGGCTGGCCAAAAATTAATTCTGTTATTTGACTAACACTTTATGGGTTATTACATTCAATATTTAAGCCTGACATACCTGTAAAGCCTTCTCCAGTATGGTGAGTTGTTTTTTTTTTTTTTCCCCCACTTTCTGTATCAGAGTCAATCACTAAAGTTTTTTGTCTTTTTGTTGGTATAATGATCACATCATGTAAGTCAGAACTATATTCTGAAGAACTGTTATCTTCTGAGACACCAGTGTATATGTCTCTTGAATAATCAAGCAAAGTATCTGCATAAAATTCACCAAAAAATTCTTCACTGAAAATTTAGCCACATGTCATTTTTGAAAATTTTCCGGGTAATAAACTTGCATTTATAGTACAAGGTTGAAACAAAAAACTGATGGAGCAAAATGTGAATGATAACGACAATCATAAGTTGTATGATGAACCCCTGATCAATTTTGAGCCCTGAAACGTTGCATGGTGATGTTAATTGTATCACTGTCTTAAAAACTTACTGATAAGTTCTGGGTCAATAACGTTTGGGTAACAAAAGACGTATTAATAAGTCTCTGGTCATTAACGTGTTAATAGTATTGCTTCAGGTGTTCTAGTCTGTGAACTTTGGGGCATGGGTACTCTTTGCCTCGGAGTGGAATTGCGGGGTCACTGTGCAGACACTGTGCTCAGCTTTGTTGGACTTGCCCCGTGGGTTTTCTAAGTTCCACTTGTCCCACTTTTTCCCCAACACTCAGTAGTGTCAGTCTTTTCATTTTTTTCTGGCAGGCACATAGCGGTGTGTCACTGGCTTTAGGTTTCACTTTAATGCTTCTTAATGAGATTGTGTATGGATTCATTACATATTCTAATGTATTGTCTGTAGATCATAAGATAAAGTCAAGCATGTATCTGCTGATACTTTCTTAAGTTGACCTGTCTTTATACTTAAAAATGTCTGTTTTAATAAGCTTCCCTGGTGGCTCAGATGGTGAAGAATCTGCCTGCAATACAGGAGACCCGTGTTTGATCCCTGGGTTGGGAAGATCCTCTGGTGAAGGAAATGGCAACCCACTTCAATATTCTTGGCTGGAAAACTTTATGGACAGAGGAGCTTGGCAAGCTACAGTCCATGGAGTCACAAAGAATTGGACACAACTGAGCGACTATCATGCAAACCGCACACTCAATGAGACTGGGCACTTTTCATATGCTTGTTGGCCTTTGTCCTCTTGTGAAATGTCTGTTCAAGTTTTGCCCATTTTTCTATTGGGTGGACTGTCTTTTTTGTATAGTCTGGATACAAGTCATTTGTTGAATGTATTGTGAGAATATATTTGGCAAAAAGCTCTTCTTTTTTGTTTTTGAATTGTGATATATGCCTTTATATTGAACACCACTTTCAGAGCTCATGTAGTATTTCAT EMBV3_13274 TCGCAGTGGCCGGCTCCTCAAGGCTAAACGCCCAAGCTCTGAGGACTTTGTGTTTTTATA Gene GeneID:615657|ATG4D:NM_001099146:93_cdna Constitutive 0 NULL GeneID:615657 7 GENE ATG4D MGC159491 ATG4 autophagy related 4 homolog D (S. cerevisiae) EMBV3_26176 AGAATTAGGATACATGGCCCTTGGGCACCAGAGCTTGGGTCAGAGCAAGAGGACAAGATG Gene BVT0102_093089 - 1 EMBV3_13758 GK000011.2:78719308-78862494 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025652 1 XLOC_014799 NonCoding TCONS_00025652 XLOC_014799 NonCoding NonCoding - 11:78786607-78797452 - TSS18562 1032 1 TCONS_00025652_4 170 0.289728682170543 2 0.905016599040944 0 0 0 0 0 0 0 5.73131281553645e-06 3.05819285467301e-05 0.000175424442347863 9.76007532642174e-05 5.19721604093362e-05 0.00158980923707942 0.0022801378202592 0.00228670650951443 0.000307111330031554 0 4.86258397494684e-05 0 0 0 0 0 0 0 2.73079732392735e-05 0 9.3073392051403e-06 1.17601838539107e-06 5.82582278194929e-06 NR_001464.2 XIST Bos taurus X (inactive)-specific transcript (XIST), non-coding RNA. 3e-14 84.2 91.94 0.0591085271317829 NR_040064.1 LINC00862 Homo sapiens long intergenic non-protein coding RNA 862 (LINC00862), non-coding RNA. 3e-14 84.2 90.48 0.0591085271317829 0 noncoding AAATACAAGAGGCTTTGCAGATGTAATTAAATTAAGACTCTTGAGATGGGAGATTATCCTGGATTATCTGGGGTTGGCCCTAATGCAATCACCAGGGCCTTTATAAGACAGAAGCAGGAGTGTCGGAGAGGTCCATCAGAGAAATAGACCAGAGTTGAAGGTGCTACCTCGCTGGTGTTGAAGATGGAGGAAGGAGCCACGAATCAAGGAATCAGGTGGCATTTTGAAACCAGAAAAGGAAACGACATGATGAGCTGAAGAACACGTGGCCTTAGAAGACAGAGAAGAAGGTGGAGTGGAAAGGCCAGGGACTAGAGAGAGAACCCTTGTTGGGAGCCCACTGGAGAATTCTGTCGTTGAGTGAGATCAGTCAGGCACTGATCTGAGAATTAGGATACATGGCCCTTGGGCACCAGGGCTTGGGTCAGAGCAAGAGGACAAGATGCCCCAATGCCCCTGATGATCTTGGCCTCATCTGCAGAGAGGTCTGTCCCGCCACCGCCAGCCCTTGGCATGTTCTGCACTCAAGAGACACCAGCAATCTCGATGGCGAGGGGGGCCACCTGGGGGTGGGCAAGAGGCATGAGGTCATTGTGTTGAATGCTCACCCCTCTTCACACCCCACTCCAGCACAGCCTAGAACAACCACTCCCACGAGGTGGACCTGGGAACACAAAGATAGCAAGGTATGCGGCTGGGTCCTGGCCCCAGACCTGCTCGGAAGACAATCAGCCCAGTCACAAAGAGCTTCTCAGAAGAGTTTTATTGGGGTGCATGTGTGTCTCCTTCACTGTCAGGCACCCACTTGCCTCCAGAGAAAGGGATCCTTCATCCCTCACGTTAGTCATGAGTCCCTGCACAAACAAGGGGCCTTTCCACGGCTTTCCCACCCACCCTGGGCCAGAGCCTAGCACAGAGGCTGGCTCAGACAGAGATGCTCTGTAGTTTCTTATGAATAAACGAAATGAAGTGAAGGGAAGTGAAATGAAGTCAGCTCAGTCGTGTCCGACTCTTCACGACCCCATGGACAGT TCONS_00025655 s 5' 64594 TCONS_00025649 TCONS_00025650 s 3' 66574 EMBV3_29897 AAGCTGGGACACGACTGAGCGACTAACACTTCCACTTTGTGAATGAAGCAAACAGGACCT Gene GeneID:539152|SUPT7L:NM_001076150:192_cdna Constitutive 1 NULL GeneID:539152 11 GENE SUPT7L NULL suppressor of Ty 7 (S. cerevisiae)-like EMBV3_32442 TATCATAATCTCTCAGCTGATGAATGCAAGGCACCATCAGAGAGGCAGTTGCGATATAAG Variant GeneID:508246|MYST2:NM_001076818:70_cdna 759^848 2 EMBV3_43245 GeneID:508246 19 GENE MYST2 MGC143325 MYST histone acetyltransferase 2 EMBV3_14591 AATCAGTCGTCTTGTTAATCATCAGGCACCCCACCTTTACCCCTTTACCGATCTCCCCTG Gene BVV0102_118532 + 0 NULL GK000007.2:71378565-71421944 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214115 1 XLOC_130611 Coding TCONS_00214115 XLOC_130611 Coding Coding LSM11 7:71370306-71383352 = TSS160236 5947 1 TCONS_00214115_5 213 4 0.544423150632426 0.0102448899389428 0.0086646058890839 0.00963834420970702 0.00549886002950902 0.00485997134023094 0.00275662599485846 0.00496190477567993 0.00632597411375713 0.00798366761879152 0.000800481539683133 0.000222490217710521 0.000131675777884417 0.000959919107452969 0.00217111506834051 0.00183831308767856 0.000310879667290519 0.000559039553823696 0.00068349345947713 0.00822854052132647 0.00699128760898512 0.0026860620612321 0.00031444657689247 0.000360975594884726 0.00068783876635905 0.0082391326184575 0.00607480159972559 0.00548378073131608 0.000194751908474032 6.04069797865115e-05 4.24607825205992e-05 XM_002707831.2 LSM11 PREDICTED: Bos taurus LSM11, U7 small nuclear RNA associated (LSM11), mRNA. 0.0 1.058e+04 99.98 0.987220447284345 NM_173491.2 LSM11 Homo sapiens LSM11, U7 small nuclear RNA associated (LSM11), mRNA. 0.0 2480 81.78 0.426937951908525 TCONS_00214115_5 sp|Q8BUV6|LSM11_MOUSE LSM11_MOUSE U7 snRNA-associated Sm-like protein LSm11; 8e-150 426 98.12 0.995305164319249 1 noncoding 0 0 0 0 -0.08775813055446 0.657212443156859 0.051935356525509 0.418753382856534 CGCGCCGCGGCTGCGCAGTGACGCCCTCTGGCGGCCCCGCTCCTTCTTCCCATCGGCCTCGGCTTGCGGGCCTTTCAAACATGGAGGAGCGGGAGCGGGGGGCGAGGTCGGCTCGCGCTGGGAGCCCCGCGCGCCCGCCCAGCCCGCGGCTGGATGTCAGCTCTGACAGCTTCGACCCGCTGCTGGCCCTGTATGCGCCCCACCTGCCTCCCATTCCCTACCCCAACGCGCCCTGCTTCAACAACGTGGCCGAGTACGAGAGCTTCCTCAGGACCGGGTTACGGAGCGGCGGGCGCGGACGGGCGCGGGGCGCGGCCGCTGGCTCAGGGGGCCCCGCTGCGGCCGCCGGGCCCTCGGGCAGGACCCGCCGCCGCCCGGACGCCCCCGCCCCGGACCCCGAGCGCATCCAGCGCCTCCGCCGCCTCATGGTGGTAAAAGAGGAAGGGGACGAGGCCGCCGACGCGCGGCGGCGCGGTCCGGGTCGGAGCTGAAGGCGCCGCGCAACGTGCTCACGAGAATGCCCTTGCACGAAGGCAGCCCTCTGGGTGAACTCCATCGTTGTATCCGGGAGGGGGTGAAGGTGAATGTTCACATCCGCACTTTCAAGGGACTTCGGGGCGTCTGTACAGGCTTCCTCGTTGCATTTGACAAGTTCTGGAATATGGCACTTACTGATGTGGATGAGACCTACCGAAAACCTGTTCTAGGCAAAGCATATGAACGGGATTCTTCGTTGACTCTCACCAGGCTCTTTGATCGACTAAAACTGCAAGATTCCTCCAAGAAGGAAACAGATTCTAAGTCTGCAGTTGAAGACTCCACTCTCTCCAGATACTCCCAGACATCCACATGGAAGGTGGCTTCGGTGTGGGGAAGAGGAGACACCGACCGGAGTTCACGCAGACGTTCCCGCTCCGTCCCTTCTTCCTTGCAGGCGTCTGCAAGGGAGGAGTCCAGGTCAGAGCTGTCAGGGAGGACTACACGGACAGAAGGGTCCAGTGCGGGGGGTACCTTTTCCAGGGCTACCACCCTTTCCAGGGGTCCGTCCCGTAAGAAAAAGAGAAAGCCCAAAGTGGATTACCAGCAGGTTTTCACTCGACATATAAACCAGATTTTCATTCGAGGTGAGAACGTCCTGCTGGTTCATCTTGCACAGTGACTGGCTCAATCTCACTTGAGCTTTGGTTTTAGAAATACAGTGCATGAATTGCTGCTATGCTTATCCTAGTGTCCCAGTGTAACTCGAAATTGGAGTGATCCCTCTGGTCCAGCATGTGCAGAGCATAGAGCCAGGCTCAGGCCCTCTGGGAGATGAGGTCCGGAAGGGAAAACAGGGCTTGAGAGGGTGGTGGGTGTTTGCATTAATATCACAGCAAAAGTTGTACAGAGCATGGTCCATGCATCTGATTTGGTATCACGGTCTATTGCATACACTCAAACCAAATATAAGATCTTGAATTGGGGAGCATGGTATGAATTGAATTGACTCCACAGACACTATAGCATGGTGAAGGAGAAAGCCTCCTCAGGAAGAATGATCTTATTTCTAAAAGCTAGTGCCCTGAGTACTCATTAACTTGTATCTAAGAGTAGCAGTATAAATTGCCTTGAGCCCTTCATCCGCACCTTGTAACTGACCTTTAAGTTTCACTCTACACCACTCTCTCTTGATCGAGGAATGTACTTTGCTATCTCTTAATATCTGTAGGATATAAGAAGGCTGCACATTTATGTAAGAGTGAAATCTGGGTGGGTGGCATGCTCCAGTGAATGCTGTGTCTTCACCCCTCTCCATGTTATGGGAAGAAATAGGGGACCTTGTTGGTTTTCCTCTTGCCAGAGGGAGTTTCTGCAGATGGTGTACCAGTGGGACTGGAAGATGCGCTTGTCCTCTTCTTTCACTTTTGTGGCATGGTGCTAGTGCATGTGCCTGCATATTGCCCCCTGTGTATAGTGTGACCTGTCCTGTGAGCTTTATAGCAGGAGGCTGTCACCTTCATGACTGGCTGCAAAGAGTTCTGCATGAACTCAAGAATACACACACATCATGTGGTTGAGAGTACCCTTTCCGGGCAGGGCTGGCCCTGCCTCGAGTGTCTTTCAGGATGGTTTTCCATGAAACCCGGGTGGAGTGTTATTCCCTTGTGTCAGGCCAAAGAGGTTCTCACAAAGTACAACAGCAGTGTCTGTAAGGGACACGTTAGTCAACCCGGCTTGAGTAACCAAACACCAGACCACCTGCTACTATTTCTACTTGAATCATATGCTTTCTCAATCACCAGTGCAAAATAGGCTATATCTCGACACAGACTGTTAGGCAATATTGACCTTTTGTTTTGTTAGATTATGTTAGGTTTTATTTTAGATATCTTACATTCAAAGTGAGAATGAGAAATAGCTCGCTAGTTAAAATGTTTGAAAAGAAAAACTTCCTCTGCTGTATTTGTTGTGTAACTTAAATGAGCCTTCTGAGAAGCAGGTGAGTCACGCTCAGAGAGCTGAGCCGGGACTCCTGGTCCTTCGGCTGGCTGGGCCTCTGGAGTGAGAGGAGAGCAGACTAACCCCTCTGTGCCTCAGGTTTTCCCTATCAGACACCTACCTCACAGGGGCACTGAGGAACAGAATCTGGGGAAGGCATTTTAAAGTCTTTTAACATACTTAAGTGCCATGAGTAATTTTTACTCACTCTGTTTCATAGCTTGCTAGAAGTTCACTGTCTCATGAGCAAAGTAGGTGCTATATAATATAAGAACGTAATCTCTGTAGGTGTTAGCAGTTATGATCTTCTTGTCATCAGAAGGCAGTGATATCTTCAGGAACTACTTTCCATGTTCCATTCCTTTCTCCTAAGGGACAATGGAAGTTCTCAGAAGAATATCTTTAGTGAAAGAAAAGTAACAATTTTTTTGCTGCTCTCCCATATCCCAGCCCCCACCCTTTTCTGGTTGTGATGAGAGGGAATTCCCCTGCGCTTTTTTGGGGGTTTATATTGCCAGCACTGAAGGAAGGATGTGAATCTAAAAACAGCACATCCCTGAAAGGGAATCTGTGGAAGTTGTTTTATTTGATTTTGTTTCAAAATGGGTTTTAAGTATACTCTTTAGAACCAGGTGAGATGCACTAAACATTTAGAGAGGTTCTAGGTTACACATGCAAGTGAACAATTATCTTTGGACACTGCCAGTCTGAGTCTTTTTAAATAGTATGTTCTAAAATCAGTCGTCTTGTTAATCATCAGGCACCCCACCTTTACCCCTTTACCGATCTCCCCTGTTTGGTTGTCCCCATCTGTCTGTCTGTCTTGTCCCTCATCTGGAAGCTGTAATAGTTACTAAATTTTCACAATAAAGGAGAAATTTGGAATTAAATGGAATATAATCAATTTCTATTCATCGTAGTGCCTGATTAAATCTAACCTGACTTATTTTAAACACATGCTCATTTCCTTGTTTGCATATAATTTTCATGTGTCCATATAACGATTGATTTACTGCTTTTCTGCCCAACTTAACAATTCTGGCTCTAAAAATTATTTTAAAACTGTGTGCGATCTGTCTTACGTGCCCATATTCCCCATTTATTGGTTTGGACAGTGATTCTGGGATGATTACTGTCTAGTAAATGTGATATTTTGTACAAAGCATGATAATCATTATTTTATAGAAGTAAATTTTTAAAATTATTGCCTTTTCTTTATTATTGGAGAAATTTTTCAAAACGAAGGAAAAATATATTCTAAAAATGTATATGCTGCTCAAAAATGTGATCATCTAAGACATTTTAACAAATTGCTATGGAAATAACTGAAGTCTTCCTCAAGAGAAGACAAGGAAAGAAAAAGGGGAAAAAGGGGAAGTAACAGCCAGAACGGTAGATTTCTGGAGGCCCCCCATCAGCTCGCCAAGGGGGCCCTAAACAGCCGGTATACACCACAACTGGCTTCTAGTATTCCCCAGGGATTTGAGATTGAGACTCTAGTTCTTATTTTTTTTAACATTGAAGTGAAGTTCTTCAGAGTGATCTCTAGACAAGGGAGCATGTTTTCAGGGCAGACCTATGAACTTGTTAGAGGTCTTCTCAGGCGTATCCAGGTTTGTTAGAAAGTAACAAGGGACTGAGAGATGGAAGGTGTGGCTTCACCCCCAGGACGATTTCATGGGCCAATATTTGTGCACAGAGGTGGTTCAGTCTGCTTCACCACTAGGAGAGGCTGCACTTTAGGTTGTTTGTGCTGGTATTTAGGAAGTATTTCTGCTTTCTTTCAGAGACCAGTTATGATAGAGGTGGGCGGTTAGCAAGATGGTTAGCTAGAGTTGTCAGTGGCAGGTGGCCCTGGACCAGTTGGTTTCTTTATCTCTCTGCATGTTGCGTGTCAAGTCAGAAAGCCTAGAAACTGTTAGCATTAAAGTCAAGGTGCATAGGAACCCTTGCCAGTGTCGTTAGTGAATGAAGAAGGGCTTTACCTATCTTCATGGTGAAAAGGTCCAGGAGTACCTTAAGGGATTATCAGCCCCAGCCTCAGAAGCCTTACACAAACCGAGGTGTACTGCCTGTACCCCTTGAGAAAGAACCTAACTTGATGCAGAGTGGATATTTGTATTTCTATTTGTACTATTTTCATAGCAGCAGACATGGGCAAAATCATGAAATAGAATCTGTTCTGTAAATTACTTTAAAAATCTTTCTTTTATTTTTGCCTTTAGGAACAAATTTAAATTATTCAAAGACAGCTAGCTGTCACTGGTGCTGCCCCAAAGCTTTCTAATCCTTTATGTATTTTTATGAATGAAATGGTTGCTGTGGGAAGACCAAGATTCATCTAAGAGTGTCATGGTATAAACAGAATGGTTTGTAGTTGTTTGAATTTTTCTTTTCCTGTGCCAGGTATAGAATGCAGTCGACCCCTTTTCAGTAGCTTCTGTTCATCAGCTTGTGTGTTTCTGGGTAGCAACTCCCAGATGGCTTTTCTTAGTGTTTGTGAAGAAAGAAAATCTCATCTAGGCCTATGTTACAAAGGTGGGTGGTCTGTCGTTACTTCCTGGCAAATTGAGTTGATGGATTTAAGATAAGCCTTTGGGGTTCCTGCATCGTTTCCTGGGCTTTGAGGAAGGGTTGGGCCTCCTTTACTCGTGGTGTTTTGAGTATGTTTCAAATGTTTGTAAGTTCTCTTGCACTCCTCTAATAAAAATGAAAGCTGTCTGTCAAGACATGGCTTTGGATGGTTTGGAGATCTATCAGGAAAAAAAGAAGTACACCTGAGACCTTCAGTTGGTCTTTTATTTATTTAGAGTAAAAAGTAGTTCGATAAGCTACCAGAGCCAGTGCTTCTTTAAAAACATTCTCTGAAGAGATAGGAACTGTCCCACAGGAAAGCTATAAAAGCTATTCCCAGTACATGGCAATTGCTTTTGATTTTTAATCCTTTGGAGCAAATGTCTGATGTTATGTTTTTAGAGCTGTGGGGGTAAAATGTATTTTTAAAAAATTTAGGGGTGTTACTGAAACAATGACTGGCTGAATTATGTGTGAGCTAAGCTCTAGGGCAGCTGTCCAGTTCTTTTTCTGTTGTCCCGACAGTAAAACAGATAGTAAGTGATGTCTTGAAAAGTGATTTGCTTATTCCATCCTGACATCTAAAGGCATTAGGCTCCTATTTGGCAGCCCTGGGGAATCCCCTCCGCACCGTGACTGATTACCTTGTTTTTTAGACAAGGCTAAACCTGGATGACTCTGTGTATTAATAGTTTCACTCTTCATATACCAGCTGCTACAAGAAAAACCGTGACTTTTAATCTTGTCTTGAAATTACTCCTCATTGTTAAATTCACCTAAACCCTTCCTGTATATGGAGGGTTGTTGCTAGTAACATCAGTTTGCAATGTTCTGCTTTCAGTATTTGTCATACAGGAGTCTGGAAACTGTAATAAATATGATTGTCTTAATAAAC EMBV3_25725 GTGACACCAGTCCCCCAACACAGTGGTTCAGATTTCAGTTAGCCCAGCAACTTCACAAAG Gene BVV0102_258058 + 0 NULL GK000006.2:103566521-103688010 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25764 GCGGCCCTCACGGCGGTCCGCCCTTCTAGGCTGTTGCAGAGAACGGTGGTGCCGCCTACA Variant GeneID:327687|ATP6AP1:NM_175806:28_cdna 696^740 1 EMBV3_21220 GeneID:327687 X GENE ATP6AP1 ATP6IP1 Ac45 ATPase, H+ transporting, lysosomal accessory protein 1 EMBV3_42064 CGTTGCAGTATTGTGCCTTGCTTCAAAACAGGGGAAGTGAACTAAATGCCCATTGGTCGG Gene BVT0102_181311 + 1 EMBV3_36178 GK000018.2:62397565-62406976 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10915 CGTTGTATTGACAACAATATTGATTTGCAGGAGAAAATTCAGATCCAGTTAACACAATCA Variant GeneID:533850|R3HDM1:XM_002685413:17_cdna 528^659 1 EMBV3_41656 GeneID:533850 2 GENE R3HDM1 NULL R3H domain containing 1 EMBV3_24979 TACATGAAAAGGAACTCCCTTACAACCTTGGTATCTTCACTCAAATAACATAGTTGTGGT Variant GeneID:532910|LRRC28:NM_001038156:44_cdna 254^294 4 EMBV3_01941 GeneID:532910 21 GENE LRRC28 MGC134389 leucine rich repeat containing 28 EMBV3_18975 CACCATCTTTAGCGAGGAGCAGCTGCGGGCCCTGGAGGCCCTCTTCATGCAAAACCAGTA Gene GeneID:100298735|LOC100298735:XM_002694651:166_cdna Constitutive 0 NULL GeneID:100298735 17 GENE LOC100298735 NULL similar to goosecoid homeobox 2 EMBV3_26484 AGCATCTCTCACCCAGATGACCTCCCTGGGAACCAGAGACAGACTGAAGGCATCTCTGCA Gene GeneID:515016|MTUS1:NM_001075692:55_cdna Constitutive 1 NULL GeneID:515016 27 GENE MTUS1 NULL microtubule associated tumor suppressor 1 EMBV3_24828 TCAACATACTTGTCTTTGGTAGAGCTTCTTTGCTGCCACCAAATTGGTAAGACGCTACCG Gene BVV0102_101036 + 0 NULL GK000025.2:42378598-42380406 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145717 TCONS_00145716 1 XLOC_088909 Coding TCONS_00145716 XLOC_088909 Coding Coding LOC100300830 25:42369579-42380004 j TSS109134 2732 1 TCONS_00145716_1 213 7 0.738584036838066 0.0050570030002672 0.00493235021231622 0.00594299738073623 0.00383271259492257 0.00297926371334689 0.00258639971717065 0.00250944408067328 0.00359876589277031 0.00435003139551491 0.000575437519662586 1.26743066089893e-09 1.74240235870538e-05 0.000489154122564287 6.83608678785183e-05 2.35701128146954e-05 0.000127356121405615 9.00961008549284e-09 0.000237081381992991 0.00325327500701924 0.0108358794834274 0.00215153684420152 0.00054949138240899 4.91640262811234e-09 0.00114650719007373 0.00749393406819301 0.00344839336769192 0.00377933264194105 5.30023029738018e-09 2.84233855198734e-09 3.25190581620308e-09 XM_003584064.2 LOC100300830 PREDICTED: Bos taurus SUN domain-containing protein 1-like (LOC100300830), mRNA. 0.0 4569 100.00 0.926793557833089 NM_001130965.2 SUN1 Homo sapiens Sad1 and UNC84 domain containing 1 (SUN1), transcript 0.0 850 79.71 0.351390922401171 TCONS_00145716_1 sp|O94901|SUN1_HUMAN SUN1_HUMAN SUN domain-containing protein 1; 8e-134 399 87.85 0.995305164319249 1 coding 0 0 0 0 -1.77356960649768 0.00879326780454691 -0.283255469665954 0.00151390740136177 NNAAGCGGACTTGTCCAGCTGGCAGCGTGGGCAGGCCGGCTGTGAGAAGGCTGAGGCCATCCGTGAGAAGGTGGATGTCCAGATCAGAGAGACTCTCAGACTCATATTCTCTGGGGATGAGCACGATTCTTCTGTCGACTGGCTGCTCCAGAAGCTGTCTGCTCAGTTTGTGAGCAAGGATGATGTGCAGGTTTTGCTACGAGATTTAGAGCTGCAGATCCTGAGGAACATCACGCACCACATTTCTGTGACAAGACAGATGCCGACCTCTGAAACTATAGTGTCTGCTGTGAGCGGAGCAGGCATTTCGGGAATAACAGAAGCGCAAGCACGGGTCATCGTGAACAACGCCCTGAAGCTGTACTCCCAGGACAAGACGGGCATGGTGGACTTCGCCCTGGAGTCTGGGGGGGGGAGCGTCTTGAGTACCCGCTGCTCCGAGACGTACGAGACCAAGACCGCACTCATCAGCCTGTTCGGCGTGCCGCTCTGGTACTTCTCCCAGTCGCCCCGCGTGGCCATCCAGCCTGACATCTACCCAGGGAACTGCTGGGCGTTCAGAGGCTCCCAGGGGTACCTGGTGGTGAGGCTGTCAATGACGATCCGCCCGACCGCCTTCACCCTGGAGCACATACCAAAGACTCTGTCGCCCACGGGCAGCATCACCAGCGCCCCCAAGGACTTTGCGGTTTACGGGTTAGAAAACGAGTATCAGGAAGAAGGGCAGCTCCTGGGACGGTTCACCTACGATCAGGAAGGGGAATCACTCCAGATGTTCGTGGCTCCGAAAAAACCGGAAAGAGCTTTCCAAATAGTGGAACTTCGGATTTTTTCTAACTGGGGCCATCCTGAATACACATGTCTTTACCGGTTCCGAGTTCATGGAGAGCCTGTTGAGTAAAGAGATGACTCCCTATTCTTGTACATTTTGTATATACTAGACCGCCTGGAACACTGGAATCCTTCATGGACTCAGGCAGAGTACAGCATTAAGTCACCCCTGAAATACACACGCCGACCACCGGCAGGACACGGGGTGGAGTGATGATGCGTGCTGCCCAGCCGCTCCCAGCTCGCTGCTCCGTCCCCGGGAGACACTGCACGCTGGCTCTCGGGTTCAGAGACCTGCCAGCTGCAGGTGGCCTCTGGAGATTCATCTGAATGTATGGTTCACACAGACACTTGTTTTTGGGGGGGTGGGGGGGCTTTGATTTTGAACGTAAAACTATTTGCTTGACATCAGGAACAAAGCAAAGGAAGTTAAAAGTTTGGAGTGTTCTTGAAGCCTTGACAGCAGCCTTCACTAGCCCCTTGAAAGGGCCTTTGGGAGCAGATATGTGTTCAACCCAGCACACGTCTTTCAGGGAAGAACGGTGTCACCAAAGCTGAGAGCTGAACTCCCTGCCTTTAGGGTGAGCAGCTCCTCTGTTGGCATAAGTGGTTCTTTAATATCACCCGGTGCAAAAGTGATGAAAATGGGGTTTCCTGCTTAGTGTGCTCCCACCTCTGAGAAGGATTTTCCATCATCCATTCAGGAACCCTGGAGAGTTTCCCTTTGTTGCAGGTTTGAAGTGTGTCTGATTCGAGAGGGGATGGTCTGGATCTATACAAACATGTAAATAGAGTTCTCAGGTCTCCACTGGGCTCATCCCATCGGATTCTCCCTGCAGTTTCACTTCACACTATGAATAGAAACCAAGAAATCCAATCTTTTGGATATTTTCAGGTTTTGTCTTGAATTTTGATGACAAGCGAACACTAACATGCTCTGTCTTTCAGAGGCTTTTGTTTTTATTCCACTTATGGTTATTAAAGGAGATTGTCCTGTGTGGCAAATTCATGAAACCAGGACATTTGGTGATGTTTTTCTTACAGCAGCACTTTGTACTGGCTGTGGTTGGATTTGCCTTTTATTACGACTTGGCCATTCTCTTTGTTTTGGTTATAATTAATATTTAATATTTAGACTATTTTACTGAGCAGACTTTATAAATGAGGTATCTGCAAGGCACTTAAAGTTACAGATGTTTTACCTTAAAAATTATTTAAGTTTTATTGGGTTAAGGCAGTTTTTTGGTGTACCATAAATGTATTTTCAGAAAAAGAAAATGATGGTGCTGACTGGTTTTCTGAAGAGTTTTATGTATATTGCACAACAGTCCTCAAATATACAAAACTACTTAAACTAGCCTTTTTTTCACTCTTGTTAGAATTGAAATTGATGCCTATGCAGTTAAGTTGGATAAAATGTATACACGTTTCATATATTACAGGATAAATATATAAAACAAAATTTCCTATATAAAGCTAAATTTGGGAGATGGGGTGGAAATATTTTGAATATTTATTTTTAAAGATGCTAGACAGGACTTTGTGCAATGTATTTTTGTAAATGCTTTTCAACATACTTGTCTTTGGTAGAGCTTCTTTGCTGCCACCAAATTGGTAAGACGCTACCGAAATGTTTAAATAAAGACTTTTAATTTTTAAAAGTGCATGTGACATTTCAAATGAATAATAAACAGTATGTTTCTTTTCTCTACCTGCTTCGTCTCTGCCCGGGGCGATGAGGGAGACACAGCGCGTTGAGCGACCCCCTCCTCCGACCCTTTCGGGCCGGGGTCTTCGGGTAGCCAGCCTCGCGGCGCGCGTGCGCGCCTACGCCGTGCGCGTCCCCCTGGCGGCGGCCGTGCGCGTCCTCGCCGCGCGCCCTAGGCGCAGACGTGTCTCCG EMBV3_32134 AGATCCATCTCAAAGCACGAAAAGGCCAAATATGAAGCCCTGGCCAAGCTCGACAAAGCC Gene GeneID:539195|HMGB4:NM_001040562:248_cdna Constitutive 0 NULL GeneID:539195 3 GENE HMGB4 MGC133486 high-mobility group box 4 EMBV3_39556 CAATCCCCCTGCGTCTCCCAGGCTAGGCAACGCCCCCGGCCTTGGGTCCCAGTGACAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17595 ATATTGAGGCGACCATGAACTCTGCCCTGAATGAGCTGCGGGAGCTGGAGCGGCAGAGCA Gene GeneID:519843|SRGAP2:XM_002693871:138_cdna Constitutive 0 NULL GeneID:519843 16 GENE SRGAP2 SRGAP3 similar to SLIT-ROBO Rho GTPase activating protein 2 EMBV3_41872 GTGTACTTGACAAGAATGTGTATCCTGCTGGTTTTGGACGGAATGTCTTACAGATATCTG Gene BVT0102_081608 + 0 NULL GK000028.2:3188357-3273919 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08005 CCACTTTAGGAAAATGGGTTAGTAAACCAGCTCTTCAACTGGATTATCTGCAAATTGGCT Gene BVV0102_445898 + 1 EMBV3_31080 GK000015.2:6429363-6472737 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43263 CCTTGAAGAGGTTGCCCCCTGACCTGGAAAACGCCTGTGCCATGAACCAGCCGGCCCCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39999 TGTTCCTGGACATGCTGTTGTTTCCCAGTCAGAGGCCGTGAAGAGATATGCCACAGTGCA Gene GeneID:510319|CABYR:NM_001038067:16_cdna Constitutive 0 NULL GeneID:510319 24 GENE CABYR MGC133968 calcium binding tyrosine-(Y)-phosphorylation regulated EMBV3_06967 TCCACCATGGCAGCCTCCACCCTGTCTGTCTGCTCCAGCGACCTGAGCTATGACTGTCCA Gene GeneID:783495|KRTAP10-2:NM_001110186:59_cdna Constitutive 0 NULL GeneID:783495 1 GENE KRTAP10-2 KRTAP10-7 MGC139945 keratin associated protein 10-2 EMBV3_16808 AAATCAGACTTGAACCTGACCAGAGGTATTGGCTGGACACCTCCTGGCTCCTACAAAGTG Gene GeneID:532640|NRAP:NM_001098072:60_cdna Constitutive 0 NULL GeneID:532640 26 GENE NRAP MGC155323 nebulin-related anchoring protein EMBV3_11647 ATGTAAAGCCGTAATTCTGCCCCACCAAGGAGCTCAGCCTGTCTCTTCTTTTTCTCCTGG Gene GeneID:506991|TXNDC12:NM_001015536:25_cdna Constitutive 1 NULL GeneID:506991 3 GENE TXNDC12 ERP18 TLP19 thioredoxin domain containing 12 (endoplasmic reticulum) EMBV3_41012 GACACCATCATGGAGAAGCGGTCCTTCAAGTCCGAGCAGGTGGGTGCTGTGGCCAGCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35194 GGTGAAAGGCTAGTGGGGCTTGGCAGGCCCCGGAAAGTCATTCTGGGGGTCCTGTTTCTA Gene BVT0102_060043 + 0 NULL GK000003.2:105798611-105800994 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171143 1 XLOC_103746 Coding TCONS_00171143 XLOC_103746 Coding Coding SLFNL1 3:105795121-105800230 = TSS127718 2829 1 TCONS_00171143_2 396 0.0745846588900672 5 0.447141738449491 0.000848659007636647 0.000191803308699648 0.000283636330760403 8.80609315084904e-05 0.000408579364202427 9.32637245110477e-05 0.000430878228056013 0.000392183895311297 6.59861845485212e-05 0 0 0 6.085438870157e-05 4.98832468003765e-06 4.08705403325724e-05 2.33400369405421e-06 0.00147885023541664 1.48034352848344e-05 0.000413170435042866 0.000109306637878398 0.000142719024356733 2.16207396080791e-11 1.74099115643915e-11 1.77761112745069e-05 0.000303666466111217 0.000303833848554074 6.54758336845852e-05 0 2.92090383762536e-06 0 XM_005197938.1 SLFNL1 PREDICTED: Bos taurus schlafen-like 1 (SLFNL1), transcript variant 0.0 2136 96.06 0.457405443619654 NM_144990.3 SLFNL1 Homo sapiens schlafen-like 1 (SLFNL1), transcript variant 1, mRNA. 0.0 1002 73.11 0.591375044185224 TCONS_00171143_2 sp|Q8BHW9|SLNL1_MOUSE SLNL1_MOUSE Schlafen-like protein 1; 2e-176 503 69.47 0.987373737373737 1 coding 0 0 0 0 0.0367266791284202 0.746354253455288 0.0183804968569813 0.701880363248285 ATGGAGCCCCCAGGCAGGCAGCCCCTGCGGGAGCTCCCCCCAGAAGAGCCCCCGCCTGAGGACTCAGGTGCCAAGGCAGCTCCCAGCAGGCACATTCTCTACGTGGGCCACCTGAACCCCCAGTTCTCGGTGCCAGTCCTCAGCTGCCTGCTGAGAGACGCCCTGGAGCGGCTCGAACTGCCGGTGGCTCGAGAGCACATCGAGGTCGTCCGGCGGCCACGCCAGGCCTACGCGCTGGTGCAGGTGGCCACCCCCGAAGACACCCTGGCCTCCCTGCCCCGGCGCCTGCACAGGGCCTGGGGGCAGCACCAGATCATCAAGGAACTGGTGGCCCGCGGGAAGGAGCCAGTGCTGGGTGAGGGCCGGGAGCTTTCAAACCGCCGAGAGGTAAGCCAGGCTTCCCCCAGCAGGGGCCAGCAGGTGGGTCCGGCCAGGCCAGGCCCAAGCACTGGCCCCAGCCCCCCGCGAGCCAGGCCGGCCCGACCCCTTCCTACCCGGGCACTGGGCCCGCAAGGAGTCTCCCCCAGCTGGCCCAGCGGCACGCGCTCAGACAGCGCCATCACGGACCAGGGCATTCTGGGCCAGGAGCGCCTCTTCCAAGGCGCCTTCCTGGGCAACGAGACGCGCAACCTGGAGTTCAAGCGCGGCGGCGGCGAGTACCTGAGCCAGGCCTTCAAGCACCACCTGCGGCGCTACGTGTGCGCCTTCCTCAACAGCGAGGGCGGCAGCCTGCTGGTGGGCGTGGAGGACAGCGGCCTGGTGCAGGGTGTGCGCTGCAGCCACCGCGACGAGGACCGCGTGCGCCTGCTGGTGGACTCCGTCCTGCAGGGCTTCAAGCCCCAGGTCTTCCCCGACGCCTACAGGCTCACCTTCATCCCCGTGGTCAGCACCTCCACCACCGACACCCTCCTTAAGGTGATCCGCCTGAGCGTGCAGGCTCCCAAGGCCCAGGCCGAGCCGCAGCTCTATGAGACCGACCAGGGGGAGGTGTTCCTGCGGCGGGACGGGAGCATCCAGGGCCCGCTGTCCGTCAGCGCCATCCAGGAGTGGTGCAGGCAGAAGTGGATGGCCGAGCTGAGTAAGCTGGAGGAGAGGCTGCAGGCGCTGACAGCCGAAAAGGAACAGCTCCAGCAGCAACTGCAGCAGCAGCAGCAGCACAGGCCCGTCTCCTGCACCTGCTGCGTCTTGTGAGGGCCTAGTGCCCCACCTGGAACATGCGGGGCTTTCCTGCTTGACCCCAGGTTCCCCCCAATAAAACCAGTCTGGGCTGCTCAGAGGTGGACAGGAACACCGCACTTCCTGGCTCCTACGACACTGTGCATAGAGGCTAGTCCCCACGTAGTGTCAGTCCTGAGCAGACCCTGGGCTGTGTAGCTAAGAAACTGCTCTTAGCATGAGCCCTCCCCCCAAATCCCACCCCAAGGGGCCTTACTTTCAGAAAGAACTGGGCCAGTGCACTCCTGGGCAGAGCTGGCAGGGACTGTCCTTCTCCCTGAAGGGCTCCTGTAGCTCAGGCTGGGGTCCCTGAACTCTCAACAGCTAAGCAGGGCCAGAAAAGGATTCGTCTTGGGAAAGCCCCTCTGCAGATGGCACATGGCTAACTGCAGTTACAGAGCTGACAGACCACCCTGCAGCCCCTCCCCTGGCTTGCTGGGATTTGGGACTAAAAGCTCTTTAATAAATTACATGCACCCAGGCCAGAATGGTTCCTTCTAGGACATTTGTCTGATTGGATGCAACTTGGTCTTGAGTCCCATGTCCAACCCACCTCTGTCCAAAAGACTGAGCCAGCCCTGGGCTCCTCGCCCACAGAGAGCTGTGAGGGAAGGAGCCTGGATGGTTGGGGTCCAGACACTCAGCTTGAAGACCGGGTGCTGTGTTTAGTTGCTCAGTCGTGTCTGACTCTGTGACCCCATGGACTGTAGGGCTCCTGCCAGGCTCCTCTGTCCGTGGGGATTCTCCAGGCAAGAATACTGGGGTGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCCAGCTCAGGGATAAAACCCAGGTCTCCTGCATTGCAGGCAGATTCTTTACCAGCTGAGCTGCCAGGGAAACCCTGAAGACCAGATACCTTAAGGCAAATCTAAAGGACGACAGACAGAGCAGCTGGGGCCCTGATTCTCTCCAGCACGTGCACAGGAAAGAGACGTCTGACTTCTACTCCATGCACCCTCCAGCCACCAGAGAGGATTCCTGCTCTGGCTGTTTCCCCTGCATCTCTACCAGCAGAGCCGGGGACTCTGCAAAGCCAATGTCTGATCATGTCATGCTTAGGTTCAACGTCTTCCATCTCATCAAGAGCAAAGCACCACGGCCCTCAGGGTTGCTCCACGAAGGCAGACCCTGCCCAGATCACCAGGGATGAAGAGGAGGACAGGGAGTGGGGACAGGGAGTGGGCCCAGCTCCCTCCCCAAGAAGTTCTGGGCACTGGGCGGCCCATGCCAGGCTTGAAGGCAACCCTCCTGTGCCATCTCCACTACAGCCCTCGGCCCTGGTACCATCCTGTCTGCACAGCCGGGGTGAAAGGCTAGTGGGGCTTGGCAGGCCCCGGAAAGTCATTCTGGGGGTCCTGTTTCTAGGTTGTGTAAGCAGCCAGCACTTAACTGGCCGGTGGAGGCCCACTCAAAGCAGCGGGGGCACAGCTGACCCCGCGAGGTTTTGCAAACTGCCCACCAACTGTGTCCTCACTGTTGGGAGGGAGCTGCTGTCACCAAGAGGCATCAGAGCCTTCAGTTTGGGGACCAGCTTTTATAAAAATGACTGCAGACAGTCGGGAGGAGAGGTTGGAATTCACCCAGTC EMBV3_14905 CATCTCGTCCAAGGCCATGGGAATCATGAACTCCTTCGTCAACGATATCTTCGAGCGCAT Gene GeneID:100295221|LOC100295221:XM_002697474:122_cdna Constitutive 0 NULL GeneID:100295221 23 GENE LOC100295221 NULL similar to histone cluster 1, H2bd EMBV3_08225 CCCACCGGTCAAGGACCAACAGAAGGGAAGCTCTGACTCATATATTTTTAACTCCAGTCC Gene BVT0102_274923 + 0 NULL GK000028.2:4560617-4632711 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00615 GTCTGCCTTTTGTGGGTGGCGTTCTTTGAATGTTTTGCTATTGCCTGGATATATGGCAGC Gene GeneID:282366|SLC6A6:NM_174610:7_cdna Constitutive 0 NULL GeneID:282366 22 GENE SLC6A6 NULL solute carrier family 6 (neurotransmitter transporter, taurine), member 6 EMBV3_43547 TCCATTCTGTTACATGTCCATGCTTTATGTCCAGCCAGACCCTGGCCTTCCTCCAACCAC Gene BVT0102_109192 + 1 EMBV3_21890 GK000019.2:42856641-42877796 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35710 ATTTTGCACTTCAGAAGCACTACCCCACCAAGGAGCAGTATGGAGACACCCTGCACTTCT Gene GeneID:540328|FBXO25:NM_001076211:69_cdna UTR3_Alt 3 NULL GeneID:540328 1 GENE FBXO25 MGC137945 F-box protein 25 EMBV3_08783 CCAAGGACCCTTCCATACTGGAGGACCCCAGGATCAAAGCGATTGCAGACAAGCACAATA Gene GeneID:616199|LOC616199:XM_002689574:20_cdna Constitutive 0 NULL GeneID:616199 8 GENE LOC616199 NULL similar to Aldose reductase (AR) (Aldehyde reductase) (20-alpha-hydroxysteroid dehydrogenase) (20-alpha-HSD) EMBV3_28306 AAAACCGGAGGTAAAGGGAGAGGGGAAGGTGGAGAGAAAGAGATTGAACAGAGACAGACG Gene BVV0102_140432 + 0 NULL GK000030.2:110858046-111023273 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29547 TCCTCTTCTTCGGACACTTCTGGCAGCTTTTTAACGCGCTGACGTTGTTCAACCTGGCCC Gene GeneID:520173|TMEM120A:NM_001079600:209_cdna Constitutive 1 NULL GeneID:520173 25 GENE TMEM120A NULL transmembrane protein 120A EMBV3_32566 TCCCTAGTTCCAGAGGAAGAAATACCCCTGGGAAGCCAATGAGAGAGGACACAATGTAGG Gene GeneID:540755|DMD:NM_001110084:8_cdna Constitutive 0 NULL GeneID:540755 X GENE DMD MGC155049 dystrophin EMBV3_18012 TGCTGAAGCTTGCCTGTAGTGAGACCAGGCCACGAGAACGGGTGATCTACCTTTTAGCTT Gene GeneID:615808|LOC615808:XM_002693773:40_cdna Constitutive 0 NULL GeneID:615808 15 GENE LOC615808 NULL similar to mCG66490 EMBV3_08868 CTACGAGAACCTCAAGAGCTCCTTTGTTGAAGCCGCTGTGTCGGTCTTCCTGAAGCAGTT Gene GeneID:614455|RETSAT:XM_002691367:224_cdna UTR3_Alt 2 NULL GeneID:614455 11 GENE RETSAT MGC159377 retinol saturase (all-trans-retinol 13,14-reductase) EMBV3_14102 TTTTTAATGGTCGCCCCTCACGTACACACTCCAGTCCCCTGAGAGTTGGTCTTCGTGCCC Gene BVV0102_350416 + 0 NULL GK000030.2:3806382-3819814 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246138 1 XLOC_150912 Coding TCONS_00246138 XLOC_150912 Coding Coding NKRF X:3791616-3808852 j TSS184619 3916 1 TCONS_00246138_3 784 0.0278345250255363 3 0.772961995938497 0.000330154734635242 9.39983274137172e-19 2.47332944047147e-05 3.31616531178618e-05 6.94482798006993e-06 2.24997925364451e-19 2.37033891315826e-05 8.34288828127139e-06 0.000221333176691726 0.000228796993718202 0.000118630123476044 0.000380494019437904 3.41475613514671e-05 0.000579703628472825 0.000258452087958824 0.00309496814257093 6.05261274984053e-11 0.00213828034652091 7.90695250654524e-40 0.0002174473191965 1.12677836609089e-30 0.00223017479697549 0.000737302070636281 0.00253297904342597 3.517118613223e-41 2.33396874502291e-17 1.66373020018208e-39 0.00031173397884508 0.000470393322713739 0.000870115026347407 XM_005227427.1 NKRF PREDICTED: Bos taurus NFKB repressing factor (NKRF), transcript 0.0 5903 100.00 0.835546475995914 NM_017544.3 NKRF Homo sapiens NFKB repressing factor (NKRF), transcript variant 2, 0.0 3900 93.22 0.665985699693565 TCONS_00246138_3 sp|O15226|NKRF_HUMAN NKRF_HUMAN NF-kappa-B-repressing factor; 0.0 1370 96.38 0.878826530612245 5 coding 0 0 0 0 -0.00417913077296873 0.971522219782889 0.00532185447631919 0.908740553670663 GCGTACTGGCCTCACAACCTCAGGGCGGCACGCGGGTAGGTAGACTAGAACTCAGAGAAGGGGGAGCAGAGCGTGCAGGTGTCTTTTTTTTTCTTTCCCAGCGCAGTGCGTGAATCTGAGGGTCGCCGGAGGTGCGGAGCGCTGGGCCTGGCTTGGTCTCCCCGGCGCGCGAGTGACTGTGCCGGGTGCCCTCGTGCTCCTCCACGAGTTGCAGGAGTGCAGCGGGCGTGTACCCGGGTTGCCGGGACAGGAGCTTGTGGTCGCCTTCCCCTTTTTAACGGTCGCCCCTCACGTACACACTCCAGTCCCCTGAGAGTTGGTCTTCGTGCCCCCGGCGCGCCCCTGCTCACCCGGTCCCTCCCACCAACCTCCAGTTCCCGCTTGCTCCTGATCAGGAGTCGGCTTCATCCCTGGGGTCCCTGCTTGGGGGCGGAGAAGATGGCTGGCGGACGTCTGCTGTTGGGGGGCGACTTCCTGTCGCCGCCGCCGCTACCCCCCCTCCCGCCGCCGCCGCCGCCGCCCCTCCCGCCGCCCCCGCCCGAGCCAGTGCTGGAGCAGTGGCGCTATAGCCACGAAAGTGACTGGCAGTGGGCTCTGCGGCGCAGCTTCATCTGTCGGCACCTGCACAGTTATCCCGGGGCTGCCCTAGACCAGCTCCTCGCGCTCTCCGCTGCCTGGACCAACCACGTTTTCTTGGGCTGCAGGTACAGCCCACGCTTGATGGAAAAAATTCTCCAAATGGCTGAAGGTATTGATATTGGGGAGATGCCTTCATATGATCTGATGCTATCCAAGGCCTCCAAAGGTCAAAAACGTCACCTGTCAACATGTGATGGTCAAAATCCTCCTAAAAAGCAAGCCGGTTCCAAATTCCATGTGAGACCTCGTTTTGAGCCTGTACATTTTGTAGCTAGTAGTTCAAAAGACGAAAGACAGGAAGATCCTTATGGCCCTCAAGCAAAAGAGAGAAATGAACAAACACATTTTGCTAACGTGCCAAGAGACATCTACCAAGATTATACTCAAGACTCTTTCAGTATACAAGATGGGAACTCTCAGTATTGTGATTCATCAGGATTTATTTTCACAAAAGACAAGCCTGTCACAGCCAACATGTATTTTGACAGTGGGAACCCTGCCCCCAGCAGCACATCACAGCAGGCAGACTCTCAGTCACCTCCTGAGCCTTCACCATCACAGACATTTCCTGAATCAGTGGTAGCTGAGAAGCAGTATTTTATTGAAAAATTAACAGCAACTATCTGGAAGAACCTTTCTAATCCAGAGATGACTTCTGGATCTGATAAAATTAATTACACCTATATGTTAACTCGTTGTATTCAGGCATGTAAGACAAATCCTGAATATATATACGCTCCTTTAAAAGAAATCCCTCCTGCTGACATCCCCAAAAATAAAAAACTTCTAACAGATGGTTATGCCTGTGAAGTTAGATGCCAGAACATCTACTTAACTACAGGCTATGCTGGCAGCAAGAATGGGTCCAGGGATCGAGCTACTGAGCTAGCTGTAAAACTCTTGCAGAAACGTATTGAAGTTAGGGTTATCCGACGGAAATTCAAGCACACATTTGGAGAGGACCTTGTGGTGTGTCAGATTGGCATGCCTTCATATGACTTTCCTCCAGCTCTGAAACCACCAGAAGAGCTGGTGGTGCTGGCTAAAGATGCTTCTGGGCAGCCGATTTTTAATGCTTCCGCCAAACACTGGACCAATTTTATCCTTACAGAAAATGCAAACGATGCAATTGGTATCCTTAACAATTCTGCCTCATACAACAAAATGTCTGTTGAATACAAATATGAGATGATGCCAAATCGTACATGGCGTTGTCGAGTGTTTTTGCAAGATCACTGCTTAGCTGAAGGTTATGGAACCAAAAAAACAAGTAAACATGCAGCTGCTGATGAGGCTTTGAAAATCCTTCAAAAAACACAGCCCACTTATCCATCTGTCAAAAGTTCACAATGCCAAGCAGGCTCTTCACCCAGGGGATCTGGAAAGAAGAAAGACATAAAGGATCTTGTAGTTTATGAGAATTCTTCCAATCCTGTGTGCACACTGAATGACACAGCTCAGTTTAACCGAATGACAGTTGAATACGTCTATGAAAGAATGACAGGCCTCCGATGGAAATGCAAGGTGATTCTCGAGAGTGAAGTAATTGCAGAAGCAGTTGGAGTGAAGAAAACTGTCAAATATGAAGCTGCGGGGGAAGCTGTGAAAACCCTCAAAAAGACCCAACCGACTGTTATTAACAACTTGAAGAAAGGAGCTATTGAAGATGTGATTTCCAGAAATGAAATTCAGGGCCGCTCAGCAGAGGAGGCTTATAAACAACAAATCAAAGAAGATAACATTGGGAATCAGCTGCTGAGAAAGATGGGTTGGACAGGTGGTGGTTTAGGTAAATCTGGCGAGGGCATTCGGGAGCCAATCTCTGTCAAAGAGCAGCATAAGCGGGAAGGGCTTGGCCTTGATGTAGAGAGGGTAAATAAAATTGCCAAGAGAGATATTGAACAGATCATCAGAAACTATGCCCGCTCCGAGAGCCACACGGATTTAACTTTCTCTACAGAGCTGACTAATGATGAGAGGAAGCAAATACATCAGATCGCCCAGAAGTATGGTCTTAAGAGTAAGTCTCATGGGGTGGGCCACGACAGGTACCTGGTGGTAGGAAGAAAAAGACGGAAGGAGGACTTACTTGACCAGCTCAAACAGGAAGGCCAAGTAGGGCATTATGAGCTGGTGATGCCTCAAGCAAATTGAGATCTTGCTAATTTATTGTGCAGATGCCTGAGGCAGATTTGTGAATTAAAGAAGTGATGCTACATGTACTGGTTGCAGAGTATATTCATTCTTACGATGTTTCACCTTGTTCATTTCATATAGTGCTTTATTAGATATTGCAATTTGAAGAATACTGTCCACTTGTATTAGCTTAATCCAGCAGATAATATTGTGCAGTTACTGTTTATGTCTTTGATATTGCTGTGTCCCTCAGATTTTAGTGGTTTGTACAAAGCAAGAACACATATCCAAATGGAATTTCACTCCAAGAAAGAAATTCCCATTTTAAAGGGCATAGCACAGCAATCTGCAACAATATGTAAAATTGATGTTGACTACAATAAAACTGCTAAGTCGCGTCAGTCGTGTCCGACTCTGTGAGACCCCATAGACGGCAGCCCACCAGGCTCTTCCGTCCATGGGATTTCCCAGGCAAGAGTACTGGAGTGGGTTGCCTAGAGTCTTAATTCCAACTTAACTGAAAATGTCAGATCATTTTGTATTATCTATTTTCATCTTTATGTGAAGCCAGTTATAGAATGTTTAACAGTAAATTGTGCTGTATGTGTAAATGTCCTTACCAACTAAATGATGTAAAACTTTCTTAAAGTAATTTTAGTGTCCATTTATTTATAACTCTTCCATGTGGTTTCCAGAATATTGGAAGTGATTTACTGTATCTTGTGATAGGGGTTTTAACAAATTCTAGTCTTCACGCTGAGAGAGCACTACTTGAGAGAGCAATTGAAAAGTTTCCAAAATTTTGATTCAGTCTGAAGAAAGGAAGCTGGAACTGTCTGTTCTTGGTGCCTTGCAGAGAGACTCAAAGCAACTCTCCGTTACAGCTTTCATGTGGCTTGGATGTATAACACATCCAGGGTGGCCACAGCTGTGGCAGAGCTTGGTGAAAGACTGAAGATACATTGGTGCTTTGATGAAAAGGTCAGTTGGCTGGTTCTCTCTCGAAAAGCTTATTTAGCCCCCAAAGCCAACTTTGTAACATATTTAAAACTGCTATTTTCGCTTATTTCTGGAATGTAAAAAAAATGTATAAAAAGAATTAGCGTATGCTTCCTGAATAAAAAGGAGCCAAAGTTGATCA EMBV3_21193 GAGGACTTCTCTGTGAGCCAGACCACGCTGGAGGAGGTATTCTTGTACTTCTCCAAGGAT Gene GeneID:511762|ABCA7:XM_002689145:137_cdna Constitutive 1 NULL GeneID:511762 7 GENE ABCA7 NULL ATP-binding cassette, sub-family A (ABC1), member 7 EMBV3_36110 CCAGACGCTGCTGGTCCCTAGTCTTTGGATGTTATCTGATTGGCTTTATGGACTCTTTTG Gene GeneID:617362|LOC617362:XM_002693645:217_cdna Constitutive 0 NULL GeneID:617362 15 GENE LOC617362 NULL similar to olfactory receptor, family 8, subfamily H, member 3 EMBV3_09719 GGCAAAGGCATCTCCTACAGAAGTGACATGAACACTGCAGCCAATGGGTATTTAAGGCCC Gene BVT0101_065025 - 1 EMBV3_34113 GK000006.2:36992018-37117208 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04731 GAAAGTTTCCTGCCTCGTCGGTCACAGCCTGAGCGTGTCCCACCGGCCGCGAGTGGTGAA Gene GeneID:100295532|LOC100295532:XM_002697059:547_cdna Constitutive 0 NULL GeneID:100295532 22 GENE LOC100295532 NULL hypothetical protein LOC100295532 EMBV3_03574 CGTGGAGTCTGAGAGCCAGGGACCAGAATGGTGAGAGAACAGACTTTGTGAGCTTCATCT Gene GeneID:539224|PAK6:XM_002690786:214_cdna Constitutive 0 NULL GeneID:539224 10 GENE PAK6 NULL p21 protein (Cdc42/Rac)-activated kinase 6 EMBV3_33662 CTGGGAAGTAAATGCTACACAGGATACCCATCCAGAGTCAGTGAGCATGAACAGAGAGAG Gene BVV0102_314843 + 0 NULL GK000006.2:18533034-18547605 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00207180 1 XLOC_125698 Coding TCONS_00207180 XLOC_125698 Coding Coding - 6:18533558-18535104 - TSS154687 1546 1 TCONS_00207180_1 56 0.230271668822768 1 0 0.000176011461872237 0.000110493827526645 0.000287317660142893 0.000333025896059608 6.38703207030133e-05 9.25501882569718e-05 0.000169745915668606 0.000470576462652172 0.000423597627586612 6.12117362658733e-05 5.92286035888721e-06 2.0815776328042e-05 3.34069079407382e-05 0 0 1.70838190789705e-05 0 0 0.000663288399784593 0.000423299052754782 1.96360405161306e-06 0 0 0 0.000147891210906777 0.000592439681698393 0.000161070367381289 6.21291678799283e-06 0 0 XR_226504.1 LOC101907849 PREDICTED: Bos taurus uncharacterized LOC101907849 (LOC101907849), 7e-37 159 73.33 0.195989650711514 NR_040093.1 STARD4-AS1 Homo sapiens STARD4 antisense RNA 1 (STARD4-AS1), non-coding RNA. 5e-51 206 72.24 0.228331177231565 TCONS_00207180_1 sp|A4D174|CG071_HUMAN CG071_HUMAN Putative uncharacterized protein C7orf71; 4e-09 50.4 51.02 0.821428571428571 0 noncoding 0 0 0 0 -0.944354392031172 0.0247605388678109 -0.125277937835049 0.0368712059294737 GGATGGGTGGGGAATAGTCGTGAGAGGGCGGGGGAGGGCGGGTGATGGAGTAAAGCGCGTAGAACTTGCGGCAGGCAGTGGTAAAATCTCTTTTGTGCGGAAAGTGAAAGCTCAGCGTGCGTTTCAGCGTGTGGCCGAGGTAAAGCACGAGACCTAATCCAGAAATTTGCTTGGAGGGTTTAATTAGCTAACAATATAAAAAGCAGGTTGTGCGAGGAGGGGTGACAGTATCGTTCTAGCTATGATACCAAACCAGAAATGCTGAGGTTGGCATATTAAGAATTGTGTAATGCTTTCCAAGTCTGTCTTTAATTTTCCATAATTATGGCTCCTCCCTTTTTTCTGACAGCACACAGGATATAATTGCATTCACATTGTTTTCCTAAGTAGTCTCTTCTGTGATGCAGCTAGGAAGTATTATGGGCTGAATTGTGTTCACCTGAAATTCATATATTGACGTCCTAAGCCCAAGTACCTCAGAATGTGACTGTATTTGGAGACAGGGCCTTTAAAGAGGTAGAGTAAAATGAGGTCATGTAAGTGGGCCCTAACCCAGTATGACTGGTGTCTTTTTAAGAAGAGATTAGGACAGCAACAGACACAGAGGGAAGACCGTGTGAAAACACAGGAGGAAGATGGCCATCTACAAGACAGGGAGAAAGGACTCAGAATGAGATCAACCCTACCAACACCTTGATTCTTAGATTTCTAGCCTCCAGAAATTGAGGAAGTCTGTAGTACTTTGTTATGGCAGCCCTTGCAAACTAATTCAGAAAGGGAGCCCTTGTTCATAATACATACTATGGATAAATTATTTTAACATGAAACATATAGCTCATCCAGTGCTTCTTAAGGATGAATTTTCCCAAATGATATTCAGGCCTTTCTTGTCAGAAAAAGGAATACTGTCTACTTCATCCATCCTATTTTAAATAGAGGAATAATATAATAATCAGTAGCAGTAAAGGAAAGGAATACCAAAAGATCTTTGGGGTGGGGAGAGAGGGAAAGGAAGAGGAGAGGAGTATTAAGGGAAACATTTTTAAATGGAATCCCCAAAGATCATTTAAACTACTCACCTTCCCACTGGAATCCTTCTTGCTGGATTTCAGCCAGAATTGTTGGTAACAGTATATCCAAAATATCTAAGTACTATTATTTTGTTATCAAGAGTGGTGTTAAATCTTTAAAAGAGAGGTGTTAAATTACTCTATTTGTAAAACTACAATTGTCCAGCCGGCTTGTAATTCCCTGGGAAGTAAATGCTACACAGGATACCCATCCAGAGTCAGTGAGCATGAACAGAGAGAGCTTACGGCTTAAGAAGAGTTTGCAAAATGCTAATGAAAGGAAAAGTTGAAATACTAATTGTATTATTTAGTTGCACAACTCTACTCGCCATTTAAAAATTAAATCCTTCATTTCCTTTAAGTTCCTATGATTTGCTTCATATATACTCCTTCATACATACTTCCACTTATGGTATATAGGTACTTCTATGCATGTTCTCTGAGCGTCCATTTGCCCTACAGGAAACTGGGTTAAC TCONS_00204597 . 5' 526 TCONS_00204597 . 5' 526 EMBV3_14821 CCTGGCCTTCTACCTCGACCGTGATGATGTGGCCTTGAAGCACTTCCACCGCTTCTTCCT Gene GeneID:516666|LOC516666:XM_002700234:221_cdna Constitutive 0 NULL GeneID:516666 X GENE LOC516666 NULL similar to Ferritin heavy chain (Ferritin H subunit) EMBV3_10927 TGACATGGACTTGTGCTGGGGATTGGTCAGACTTTCCAGGAGACTCTTCTGCTTCAGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10401 AGTACCTGCATTCTAGTCCTGCCTATCCTCCAGGCGTCCCTAAAGGTCAGTCTGTAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05384 AGGAACGCCTCTCACACCAGAGGTTACTTGGGAGTCACCGCCCATTTCTGATGAAGACTT Gene GeneID:614027|SIRT3:XM_002683729:14_cdna Constitutive 2 NULL GeneID:614027 11 GENE SIRT3 NULL sirtuin (silent mating type information regulation 2 homolog) 3 (S. cerevisiae) EMBV3_42143 GATATCGTTGTCACTTTCGGGAGGGAGTGGCTGATAGGAATGGATTTGTTATATTTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35232 GACTCTGTACTGCTCATATTACACTCCATCCTCTCTGTAGTTTGCTGAGTAGTGGAGGGG Gene GeneID:539950|HNRNPU:NM_001076920:92_cdna Constitutive 1 NULL GeneID:539950 16 GENE HNRNPU MGC142835 heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) EMBV3_26828 CAGCTAGGCGGGTTCTTGGTTTTCATTGTAGCCGAAATTTTCATGTTAGCTGTGATGGCC Gene GeneID:615824|LOC615824:XM_002693663:277_cdna Constitutive 0 NULL GeneID:615824 15 GENE LOC615824 NULL similar to olfactory receptor MOR185-2 EMBV3_33349 GGTGTCTCAAGAAGCCAGAGGGAGCGGTTTTCTTCAAAAGACATCACATTGCTTCCCTCC Gene BVT0102_012329 + 0 NULL GK000010.2:20713842-20726775 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27274 TGCACAAGGGGAGGGATGGGGTCATGGAGGAGTTAAATGATGATAGGCCCCTTGAAGAAA Gene GeneID:100125289|C6orf120:NM_001103331:2_cdna UTR3_Alt 1 NULL GeneID:100125289 9 GENE C6orf120 MGC140336 chromosome 6 open reading frame 120 ortholog EMBV3_34362 GAAATCCCAGTGGAGACCCAGGCAAATGAGAGCATATGGGGCTTTAGAGTGGATGAGCGT Gene BVT0101_073096 + 0 NULL GK000007.2:2555051-2568168 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218559 1 XLOC_131879 NonCoding TCONS_00218559 XLOC_131879 NonCoding NonCoding - 7:2564802-2565104 - TSS162557 302 1 TCONS_00218559_1 46 1 0 0 0 0 0 0 0 0 0 0 0 7.58007031268535e-06 3.55200685180125e-05 0 1.55761165908779e-05 0 0 0 0 0 0 0 0 0 0.00177638436343433 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0214166178909525 0.836050397034786 0.0653931544387825 0.405556888409287 CCTGTTCTGGAATCCTCATTTCATCCTGGCCCAGCACGAGGGCCAGAGCCCACGCTCATCCACTCTAAAGCCCCATATGCTCTCATTTGCCTGGGTCTCCACTGGGATTTCCCAGTAATTCAGATTTCCTGAGTGCCAATCCCCATCAACTTGATAAGATCTATGTTCCACTATTCAGACCTCAGATTTCTCCCCAGAAGTCTTCCTTTCCTCCTTCTGGAGTGGAACCGTACTCCTGTTAGATTTCTAGCAGTGGCTATTTGTCTGTTTTCTCTTAACATTCTCAATGCTGCTTCCCACAT TCONS_00211433 . 3' 9753 TCONS_00211433 . 3' 10054 EMBV3_07497 GTTACCTAATAGTAGAAGATGCTATCTGCAATGAAGTGGGAACCATGAGAGGCTGTCGGG Gene GeneID:531435|DPY19L4:XM_002692815:142_cdna Constitutive 0 NULL GeneID:531435 14 GENE DPY19L4 NULL dpy-19-like 4 (C. elegans) EMBV3_40165 TAGAGGAGGTACCGACACGAGGACGCGTGACCGAGCACTACATGTCAAGTCCAGTTTAAA Gene GeneID:518905|SLC20A2:NM_001080280:76_cdna UTR3_Alt 2 NULL GeneID:518905 27 GENE SLC20A2 MGC139607 solute carrier family 20 (phosphate transporter), member 2 EMBV3_26581 TTACTCGGGAACAAGAAAGAGCTTATATAGGTCCCCTTCCCCTGAGCCCATCTACAATAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30246 GCGAGCGCGGGCCGCGGAGCAGGCCTCAGGGAGGACCTCCGGATGCAGGCAAGTGAAGAA Variant GeneID:787908|LOC787908:XM_002694639:23_cdna 71^594 1 EMBV3_41174 GeneID:787908 17 GENE LOC787908 NULL similar to Uncharacterized protein C22orf30 EMBV3_39037 CTGCTATTCCCCGGAGGCTAGAGTGTCTAAAAGAAGATGTTCAGCGACAGCAGGAAAGAG Gene GeneID:767817|CDC5L:NM_001076542:371_cdna Constitutive 0 NULL GeneID:767817 23 GENE CDC5L MGC128482 CDC5 cell division cycle 5-like (S. pombe) EMBV3_25241 CCTTCATACCAACAGCAAGGCCTTTACCGCCAAGACCTGATGAGGGACTCTCTGCTTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33721 GTTTGCTGATAGGACACCCCCAAACCAAGGGAAAAAGACCGCCACTGGTCCATTCCCCCA Gene GeneID:536781|LDB3:NM_001035416:14_cdna Constitutive 1 NULL GeneID:536781 28 GENE LDB3 MGC128608 LIM domain binding 3 EMBV3_19810 GGGGGCGGGATCCGGCTCGCCCGTCCTCAGGGTGAGGACGGGCGCATGAGGGTCCGGGGG Variant GeneID:530874|CLN8:NM_001075941:2_cdna 179^249 1 EMBV3_11541 GeneID:530874 27 GENE CLN8 MGC139174 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) EMBV3_17121 CTGTTCCTCTTCTAGATAATCTGAGATCCATGGATGGGCTTTAGGGAGTCTGTGAACTCC Gene GeneID:534315|HNRPLL:NM_001076900:143_cdna UTR3_Alt 2 NULL GeneID:534315 11 GENE HNRPLL MGC139688 heterogeneous nuclear ribonucleoprotein L-like EMBV3_21869 CTACAGCATCACCAATAACTTTCCCTTCAGGTGTTGCTTTCCTAGTGTGCTACGCCTTGG Variant GeneID:504961|MPDU1:NM_001075179:469_cdna 308^393 2 EMBV3_42437 GeneID:504961 19 GENE MPDU1 MGC140587 mannose-P-dolichol utilization defect 1 EMBV3_25024 GCTTCGAGCCGCTGCGCTTCGCCTCGTCAGAAAACACTGAAGATCCAAGATGTCGGGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30825 CCTCACTTCTCAAAAGCAGAACAACTCTGAGGCATCTTCTGTTGTCTCCAGGAGTCTGCA Gene BVT0102_292700 - 1 EMBV3_41548 GK000026.2:15732398-15754392 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150180 TCONS_00150178 TCONS_00150177 1 XLOC_091822 NonCoding TCONS_00150180 XLOC_091822 NonCoding NonCoding - 26:15733167-15737304 - TSS112560 2347 1 TCONS_00150180_4 96 0.547933532168726 2 0.433027079303675 2.98453134553433e-11 3.2777165933086e-14 4.43669178022789e-05 3.07053724320916e-12 1.64397932877962e-27 3.55318014004932e-133 2.06649171893069e-15 2.27996026416172e-11 1.04333295013502e-18 1.44262980731457e-24 9.84641896146703e-30 2.74224890187297e-05 0 8.23166454586955e-09 6.31435066615464e-13 0.000877584636049845 2.7788279031863e-08 8.19787595988183e-14 2.04682433365318e-08 4.06883493968418e-25 0 0 0.000156893680068238 1.54294740770365e-14 1.17619662951067e-17 2.17098910382129e-09 1.21324325367124e-09 3.92705060021283e-14 2.94024024499182e-05 1.72964601075795e-18 XR_229907.1 LOC101902039 PREDICTED: Bos taurus uncharacterized LOC101902039 (LOC101902039), 0.0 2544 100.00 0.6003408606732 XR_248103.1 LOC101929151 PREDICTED: Homo sapiens uncharacterized LOC101929151 (LOC101929151), misc_RNA. 4e-29 134 69.94 0.148274392841926 0 noncoding 0 0 1 1 0.00775627091037237 0.94943162577344 -0.00251915239253121 0.959961673387734 GTCTGGCCTAGCAGTCCTGACCTAGAGAGGAAAAGCCGGTAGAAGCTCCAAAGAATCTGAGCTCCCTTGGCAGTCAAGAAGCACCAAGGACCCTGAGAGCAGTCTTCAACCAATGACACTTGAAAACTGAAGGATAAATACATATGCCAAGTGTGGTAGGCTGAAGAATATCCTCTGAAGATATCAGGCCCTGAAACTGGTGAATTTTGTGTTTTAGAGCCAAAGGTATGATTAAGGATCTTGAGATAGGGAGATGATTCTGGACTGTCCAGGTAGGCCCTAAATGCAATCACATGTATTCTTAGGGAAACTAGGCAGAGGGGGATTTCACGCAGATGGAAGAGGAGGAGACCTTGTGGCCACAGAAGCGGACAGTGCAGTGATGTAACCACAAGTCAAGGAGAGCCAGCAGCCACCAGAAGCAGGAAGAGGCAAGGAGCAGACTGTCCCGTGGAGCCTCTGGAGGCAGGATGGCCCTGCTGACTGCATGATTCCAGGGATACTGATTTCGAACTTTTGGCCTCTAGACCTGTGAGAGAATAAGTTTTCATTGTTTTCAGCTACCAAATTTGTGGCGATTGTCACAGTGACCACAGAACACTAATATACCAATATTTATACCCATAAGTACACCAATGTCCTCACTTCTCAAAAGCAGAACAACTCTGAGGCATCTTCTGTTGTCTCCAGGAGTCTGCAGCAGAGTTGAGCCCTACCTTTAGGGTTACCCACCCATCAGCCTACTCTGTTATTGACTTTCTCTTCTCAGTCTCGCTTGCTTATTCTTCCATCAGTGGTTCCAGGTCTCTCCTTCAATACAAACCACATACTCTCAAATCCTTCTGTATGAGTTTCTTGGAGTTGCTATAACAAAGTACCATAAACTGTGTGGCTTATAACAAAAAAAATTTATTCTCACAGTTCTGGAGGCCAGAAGTTGGAAATACAATAAAGGTGTTGATTCAGTTGGTTCCTCTTCAGGCCTCTGAGAAGTCTGTTTCATGCTTCTTTCCTAGCTTTTGGTGATGGCTGGCAATTCATGGCATTCTCTGGTTTGTAAATGCGTCTCTCCTATCTCTGCCTCCATCTTTACATAGCATTCTCCCCTGTCTCTGTGTCTTCATGTGGCCATCTTCCCCTCATGTAAGAACACTAGTTATATTGGATCAAGGACCCAGTTTCATGACATTATCACAACTTGGTAACATCTGTAAAGATCCTATGCCCAAATAAAGTCACATTTCTACATACTGGGGATAAGAATTATAACATCTTTTGTAAGGCACATACTTCAACTCATAACACCTTGACTCAGTGTCAAATATGGGGACCCCTAACCTAAGACAATTATCACTTAATAAGCATTTTTATTTCCAAAGCATAAGCATTTTTATTTCCCTAAATATAATTATTTTTCTTCAGTAATCTTATGATATTGTGTCTATTTCAAAGTTAATAAATCTGAGGATTAGATATTATGGTGTAGTCAAGTCTGTGTTTTACCAGGCAGGAAATGTAATAAGATGCCAGTTCTACCAGTGGGAGTGGTTTTCAGCAAAAGAGATCAAATACCTTAAGCTTTTTCTTTTTTCCCCCCCTCATCTGCAATATTATAGATCAGGAAACAAAGAGGGATTTTCCTAGGGTTGTGATAATCTTTTCTATTTGAGATTTTGTTGATAAATTTAATGTCTAAGACCTGATGTTTCCTCTTTCTTTACTTGAATTGTCTGTTCAGAGCCACTCTTGTTTATTCATTGCTTTCCAGAATCTTTGGGGAAGGGGGAGTAGACTCCACACACAAAGTCATGTCCAGTTTCTGATAATCCCTTTGGCAGCAATAGTTGCTCACTCTCTGTACCAGCCTCTGCTAGGAGCTCTCTGTGAAAGAGTGTTCTACAAAACAAGGACACATTGTCTCTGCCTCTATTCTAAAGCTGCTGGTAAGTACCCTGCACAGGGAAGAGACCATAAGATGAAACTAACATCTTAGATACCTTGTATATCACAATGTGCCCCGGCTTATTCTAATATTCTCTACTTCATCTTTCACCAAAGGCCAAGTCCTTTCTCTGATTACAAGTTTGGAAATACTTCCACTTACGGGCTTATCCACATATAGTCCCAAAACCTGCTTAGGTGGCATTTATGCTTCTGATTGCTTCCCTTCCTTTTATAAGCTGATACTGCTGATTATTATTTTTTTAATTATTTATTTGGCTGTACCCAGAGTTGTGGGCTTCCCAGGTGGCACTACTGGTAAAGAATCTGCCTGCCAGTGCCTGAGACTCAAGAGACCTGCATTCTATTCCTGGGTCAGGAAGATCCCCTGGAGAAGGAAATGGCA TCONS_00151549 r 5' 723 TCONS_00151549 r 5' 723 EMBV3_18931 AGCCACCGATGTTAGTGCTGATGATTTGTTTCGTCTGAGCCACATGCCGATTTGCTCCTG Gene GeneID:539905|FLRT2:XR_083786:188_cdna Constitutive 0 NULL GeneID:539905 10 PSEUDO FLRT2 NULL similar to KIAA0405 EMBV3_38579 CTTTTAAGAACAATGTGGACATCAAGAATCACCGGAATCTCCAGGACCGCCTGCGGGCAG Gene GeneID:782446|DIO1:NM_001122593:124_cdna UTR3_Alt 2 NULL GeneID:782446 3 GENE DIO1 NULL deiodinase, iodothyronine, type I EMBV3_41284 AAGTGGTTCTTTTCCCTGAACCAAAAAAGACAGGTCAATTCAGCCATTTATGGCAAACTG Gene GeneID:616767|PRRG4:XM_002693495:143_cdna Constitutive 1 NULL GeneID:616767 15 GENE PRRG4 NULL proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) EMBV3_38754 TACAGATTACATCAATGTGGAGGAGCTGGCCCAGGTGGAACAGATGTTGGCACACCTAAC Gene GeneID:514160|RNF123:XM_002697037:484_cdna Constitutive 0 NULL GeneID:514160 22 GENE RNF123 NULL ring finger protein 123 EMBV3_10735 AGGGACCAGGTTCTCCGGGCGCTGGTGAAGGAAATATTCCTTGATCCAGGATCAAGCTCG Variant GeneID:788142|MGC152321:NM_001099207:184_cdna 224^464 2 EMBV3_09285 GeneID:788142 3 GENE MGC152321 NULL similar to KIAA0454 protein EMBV3_29640 TGCATCTAAACCAGCTTCATAATCCATGTCTAGTGCACTCATTTCTACTGCCACAGTTTC Gene BVV0102_091046 + 0 NULL GK000011.2:55149941-55956808 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03923 GGCCAAGAAGCATCCTAGCTTGATCCCCTTCTTCCTATTTATTGGAGCAGTTGGTACTGG Gene GeneID:100296227|LOC100296227:XM_002698308:1068_cdna Constitutive 0 NULL GeneID:100296227 25 GENE LOC100296227 NULL similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa EMBV3_09908 GTTCATGAATTCCACATGCTGTTACAAATAAGGGGTGGAGTGTCCCAGATACACTTCTGC Gene GeneID:538911|HIST3H2A:NM_001098097:40_cdna Constitutive 0 NULL GeneID:538911 7 GENE HIST3H2A NULL histone cluster 3, H2a EMBV3_26049 TCAGACCCATCTCTTCAAGCTCTTGAGTCCCACCAGATGCGGACTTGGATGTAACCAACA Variant GeneID:520979|AIMP2:NM_001075813:215_cdna 247^319 2 EMBV3_07939 GeneID:520979 25 GENE AIMP2 JTV1 MGC152188 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 EMBV3_42895 GATACATAGATAAAGGGACTTCCCTGGGGGTCCAATGGTAAAGACTCCATGCTCCCACTG Gene BVT0102_116244 + 0 NULL GK000003.2:49781523-49797089 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169787 TCONS_00169788 TCONS_00169786 TCONS_00169790 1 XLOC_103444 Coding TCONS_00169786 XLOC_103444 Coding Coding DNTTIP2 3:49770076-49785616 j TSS127032 5097 1 TCONS_00169786_4 197 0.259172061997253 6 0.67237273955853 0.00108686777553997 0.00215877822377975 0.00158098599618886 0.000965165472990566 0.00179866875903145 0.000426324591506905 0.00104245609655222 0.000988943885738458 0.00187095830983559 0.00010135163601108 0.000538040704428568 1.06899440467282e-08 0.000211250526917974 0.00181111706929506 0.000219891191406925 0.00470115445061111 1.44693919858702e-10 0.0025929280839112 0.00244776952626299 0.000714940313024707 0.000315798498275575 0.000446320572338397 0.000797543108635296 0.00329951412007959 0.00178213737228249 0.00221599801636244 0.000701310978767315 7.10922127934683e-05 0.000192548630976116 1.03175399851249e-13 NM_001075506.1 DNTTIP2 Bos taurus deoxynucleotidyltransferase, terminal, interacting protein 2 (DNTTIP2), mRNA. 0.0 1420 100.00 0.154208357857563 NM_014597.4 DNTTIP2 Homo sapiens deoxynucleotidyltransferase, terminal, interacting protein 2 (DNTTIP2), mRNA. 0.0 915 83.99 0.165195212870316 TCONS_00169786_4 sp|Q0P5H2|TDIF2_BOVIN TDIF2_BOVIN Deoxynucleotidyltransferase terminal-interacting protein 2; 9e-141 415 100.00 0.99492385786802 1 coding 0 0 0 0 -0.214878002719597 0.154215127091137 0.021526549362754 0.681226911674553 CTGAACTGAGGTCTGAGTGGCCGAGGCGGCACGAGATTCTCTTGAGTTCCGAGATTCTCGCGGGAAACGCGAGTGAGGCGCATCTCTGACGTACTTCCGGGTCGCGGGACCAGAGGGAGGCTGCGGGAGCCACACGCCGGGAAGATGGTGGTTACTAGGTCTGCGCGGCCTCAGGCCAGGAACGAAGCCACGTCAGTTGAAAGCTTGCGGCAGAAGTCTGAAGTTGATGAGCAGCAGCATAGATACTGGACTGAATATTAAGGAGCTGGGTGGTTTGTATATTAATTTCAATGCAGACAAGGTACAGTTGAACAAGAGAACCCTAACACAGATGAAAGAGAAAAGGAAAGATGAGCTTCTGCAGAAAACTGTCATTACGCCTGAATTTGAAAAAAACTACTGTGTCCCACCATATAGTGAATCAAAATATAAACTTCAGAAAAAACGCAGACAAGAGCGACAAAAAACAGCAGGTGATGGATGGTTTGGTATGAAAGCGCCAGAACTGACAGATGAACTGAAAAATGATCTCAAAGCACTGAAGATGAGAGCTAGCATGGACCCAAAAAGGTTTTACAAGAAAAATGATAGAGATGGCTTCCCTAAGTACTTCCAGATTGGAACCATTGTTGACAATCCTGCTGACTTCTACCATTCACGAGTTCCCAAGAAACAAAGGAAGAGAACTATTGTGGAGGAACTGCTGGCTGATTCTGAGTTCAGAAGATATAACCGAAGGAAGTACTCAGAGATAATGGCTGAAAAGGCAGCAAATGCAGCAGGAAAGAAGTTTCGAAAGAAGAAGAAGTTCCGTAATTAAGATTCACCGAGCAAATCACAAAATTGTACATCTCCTCTTTATTTATTTACTAATTTAAAAATTAGCACGACTGTCACATAAAGTAATATAGACTGGCCCTATTGGGGGGTTTCTCGTTAAAATTTGATTTGAGAGAGAATCAGTCACATGCCACCCGGAATAAAAATAGGTGTGTCTACAAAAGATCCACTCATGTTTAGACCCTTTGAGGAGGGTAAAAAGGAAAAGAACCTCAATCAATATATTTAGAAAATACAAAGTTTGCTAACATTCAAAAAATTTAAAGTATTTTCAAAGCTACATAAGCAATACTGTAATTATTATGTAGAAGTGTACATAGGGAGATGATGCCCTGTGTCAGTTGCACATTCAAATCCAGAAAACTGGTAAAGCTGGGATACAGAGATCTTGTTGCAAGTGTAAAAGTCATAGTTGAAATCAAAGAAATGTTGTAAGTGTTGGAGCGTGTGTATGTTAATATATGACCAAAGAACTAAATGAAGCTATGAAAAGGACTTAAAAGATAGACTACTTGGAAAGTTTGGGTTAAAGGTAGAAGCAGGAGAGCTATTTTCTTTCCTTAGCAACTGAAACAGGAGGTAAGATAGATTTTTATCCATATTCAGGGTTGTGTTCCAGTGAATAGTATTCAAATAATTTTAACTTGGCCAGGAGGTAAAGTCTCCAGTGGCAGAAATATGCATCCTTGCTAAGCAACTCATGACACCCAAGGAACACCAGTCATTTCTATTCATGCTTCTTGGTGGCTTATTGCTTCCTTTATGTCGTTATTCACGGGACCTCTGTTTTCTGCCGAACTGCTTTCTTGGGATTTCAGTAAATAAGCAGCTTCCTATTTTGTGTTTACTGCTTAGCATCACAAGCAGCCTAGTAATAAAACTAAATGACATTTATAGGCAGAGTGAGGGAAGCATCTGTTCTCTTTTATAGTAAAGCTTTTATTTCAAGAGTATTAAGTTTTACGTTAAGGACCTGCTATGAGAGAATTAACTATCAAATCAAGAAGCATTTACCCCATACACATTCTTCCAGAAGGAGACATTCTTAGCGGAACGTTTCTTCAACTCATGCTGCTGGGGTGTTGGAACACTCAAAACTGGTGGCCCTTTTGTATTGTGTTTCTCTGTGCAACTGAGAATTTACCCAGTTTTTTCTCAGGCTGAAGGGGATGGGTCAACTTTTTATCTGTCTAACCTGCGTGCTGGTTTCTGACTCACGAAGCTAGAATAGGTTGAATTATCTGGTATTCAAAACTGCAGTTATGACAGATATTTCGGACACTGTAGTGCATTTACAGGGAACACAAAATTGGAAATCTCCAATCCTTCCCACACAGGGCAGCATTTGAGCTTTCTAGATTGGGAAGCAGTGATAAGAACTAAACCTAGGTGCCAGCCTCACTAACCCATGTCAGAGGTGCTCACAAAATGTATTCTGAAGATAGCTGACCCTTGAACAAAGGGGTGAGGGGCTCTGAGCCCCAAGCAGCTAAAAGTCAAAAACTTAAAGTAGGTCCTCTATATCCACGGGTCTTCATCTGAGAACCAACTGGTCAACTCCTGCAGAACATGTAGTACGTTAGTATGGATTTACTGGAAAACCTATGTATAAGTGGACCCACCCAGTTCAAACCTGTGTTGTTCAGGGGTCCACTGGATTTACTTAGTTAAATTGTAACATGCTCTTTTTTTGTCTCCATTGATTCTTTAGTTTTTTTTTTAAAGTTTATACTTTATTCAGATTTTCTTAGTTTTTTACCTAATAATCTTTTTTTTCCAGGATATTGCAATCTTTTTTTTTTTTTTTGGCTGCACTGCAAATTATACAGAATCTTAGTTGCCTGACCAGGTTTCGAACCTGCACCCCCTGCAGTGGGAGCATGGAGTCTTTACCATTGGACCCCCAGGGAAGTCCCTTTATTTATGTATCTTTTTAAGTCACATAAATAACTTGGAACAAAGTAAAGAGTTAACAAATGTAAAATACCTTATTCAGTGAAATACTGAAATAAACTGAAATACTTCAACTGAAAGTCAATTTAAGTCACCTTTATTAACATTTTCTTTAAGGGATTAAAACTGGTAAGATCCATAGCTGTATCTCAGATATGATCTTCACAAGTTAAAATCTTCAAAACACAGTATAGAAGTATATCTAGGTAAAGATGAGAAGGAAGTTTCTTCGTGCCCTCAGGCTTCTACAAAAATCTATGTTTGAATAATGGATGTATTTATCTTGTGTTTTTTTTTTTTTAAGCAAAACAACCATTGAGAAACAGGTTTAGTGACTTTGGCTTATGTCAACTAAACTCAGTTCACTTACTGGACCTATTTGAAGGCTAATGACTATCAGAAGTACTATGACTTCTCAACTCAAAAGCATTATAAAGTGTACCAAATGCTGATACAGTGTAATGAAAGAAGAGCCTTCAGAATACCTTAAGGAGCTCCTGAAAGATCCCTGAAATGCTTTTAAGACAACTTATTAAAAACATAGTCTGCAATGCTAGTTTTGATTGTTTTGTTTTTGGTTTCTTTTGGCGGGGGGGATTGCTTTTCCTAAAGTAAGGAAATTAGGGAAAGGAAAACGAAGATGGAAGAAATTAGAAAACTAGCAGTTGATGAAGGCAGGTTCTCAGCTTCCTAGAATCTTAACACAAAAATCCGCTCTGTTCAGTGTTCTGCCGTGAGATTAAAAACAACTGCTTTAGAGAAAACCATTATACCTATTTTTTAAGACCCGAGGAAATGTCTCATGGGTTCCCTAACGGCTGTCAGACTACAAGCCATGCTTGGCTGTTCAGAGAATAAATAGCAGGCTTTTAAAAGGAAGAAAGCCTGTACAGAAACATTTAATGAAACTTTGAGCAACTGGGATAAATTCAAGGGGTTGCATTCTAAATATAGCAAATATAAGAAAAACTCATGAAAAAATTTTCAGTACCATCTCTGGAATGTGTGCAGGTGCTCATTCAGTTCAGTCTCTCAATGACAACTACTGTTTAGAATAACCAACTACATCTTATTGAAAGCATGCAGTTAGGATTAACAAAATGATTACAAACTCCCCAAAGCATCTGACTAGAATGTAAAATTCAGGTGCATTCAAATTATAATTTATTTCCCTGAAGCAGGGTCAGTAGCATGACTTGTCTTAAGCAGATCGGTGTTTTATCAGAGTTGGAATGTTTCAAACTATGAAATGCGGGTTTAGCTAACTATGGAGGTGGTTCTGAAATGTAAAGTTACCAATAAACACTGAACACCAGCTGCGAGAAAGGGGAAACTTATAGGTTCAGGTGATAGGTGTTCATTCGTTATCACTGTGTAACAAATTGCCCCAAGACTCAGTGATTCAAAACAGCCACTGTTTTACTCAGTCTCATGATTCAGCCGGCCAGGGCTGGGCTAGATGGCTTGTACTCCACATGGTATCAGGTGAGGTCATTCAGCTGGCGGCTGAGCAGATCTAGAAGGCCTAACACATTCTTGAAATTTATCTTCAGTTTAATGGTAGTACAGCATAGAAGGGCTTCACCAGTGGCTCTGCAGTAAAGAACCCGCCTCCAGCCTGCAGGAGACACATGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAACGAAGAAAATAGCCTGCAAGTGTCAGACATGTTTATCTCTCTCAAGCGGCAAATTTAAAAGTAGGTTTCTCTTAAAAGACTGTGTTGCCATAATGACACCTGGTTTCACCTGAAGTTAACTATTGTCAAACCTAGAGATAACCAATATATTTCTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTACTATGCATTTACCCCAAACTCTGTCAAGTCAGTTCCGCCTCTTGGCTCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATTTATGTAAATGAAACTATTTGTATGGTGATCTGCCCTTCTTCAAGTTAATCATTTTATGGCCCAAGATGAACCATTTGGTGCCAAGATTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAGTCTTAAGACATTCCTTTCTTTTATTAATAGACTGCTAGTGACTATATAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTATCTCCTTTATACTTTAATAAAACTATTACACAAAAACTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGTGTTGAATTCTTCTCCTCCGGGGGCCAAG EMBV3_36337 TGAGGGTGAGGCTGACATCAGTGGCTTAAATCATCAGCAAGAGGAGAGAGAGGCCCCAGA Gene GeneID:100138147|NEK5:XM_002691745:250_cdna Constitutive 0 NULL GeneID:100138147 12 GENE NEK5 NULL NIMA (never in mitosis gene a)-related kinase 5 EMBV3_28547 TGAACGTCTGTTCCCACTCATCCAGACGATGCACTCGAACCTGGCTGGGAAGATAACTGG Gene GeneID:534576|PABPC4:NM_001083724:227_cdna Constitutive 1 NULL GeneID:534576 3 GENE PABPC4 MGC139030 poly(A) binding protein, cytoplasmic 4 (inducible form) EMBV3_06149 AGGACCTCCACCACGGGCGCATCCAGATGAAAACGCTGACCAACAAGTGGTATGAAGAGG Gene GeneID:617800|LOC617800:XR_084579:204_cdna Constitutive 0 NULL GeneID:617800 13 PSEUDO LOC617800 NULL similar to KIAA0939 protein EMBV3_09260 ACCATCATGCTCTTACCATTAGTGGGTTAGCTCAGGTTCTCACAGATGCAAAAGCCCAGC Gene BVV0102_271968 + 0 NULL GK000030.2:54863380-54927385 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251063 1 XLOC_154006 NonCoding TCONS_00251063 XLOC_154006 NonCoding NonCoding - X:54869084-54869959 - TSS188284 875 2 TCONS_00251063_1 55 0.605714285714286 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.04846212686175e-05 0.000670585893991716 0 0 0 4.39094220023076e-05 0 0 XM_005219714.1 VSTM1 PREDICTED: Bos taurus V-set and transmembrane domain containing 1 (VSTM1), transcript variant X2, mRNA. 2e-28 131 90.53 0.107428571428571 0 noncoding 0 0 0 0 CAAGGAATTCACACAATATAATAGACCCTTTTTTGCAGGCATTTCTGTACAGCATTTGAATCCCTTTATTTTGGGGGTGAGGACATAAGACTCTTGCTAATAAGTAGGGCCCCCTTATAGTCGGGGCACAGGCCTATAACTTAGGCTTCCTTAACGCAAGGAACTGGGAGCCAGTGGCCCAAAGAAGTGGACAGTCTCCAATTCAGACAGTCATGACAGTGTGCCTCTTGGTTCTTCCAATGTGGGAAGTGTCACTGACCTTTGCTCCAGTTAATATGCTTTATATTCACCCCAATATTTGCTGCTTTGCTCTGAAGCCCCACTGTTCCCAGCCAATGACTAAGCACAGAAGGAGTCAGGCCCATTTCTGGGAGACATAGGACTATGTGGCCTGTGACTTTGGTAACAGGACTCCCCATCAGCCTGGTCCAACTTCATTAGCACTAAACTTCAGTCTATGACTCTTCCTATTCAACCTTCTTCTTTCCTTCTCTCATCCATAAAGGTCAGATTTACATTAAACAGCTCTCCCAGCTTCTTTGGCTCCCTCCCTACATTCTCTCACAGATATTTTCCCCAATAAGGCTCCGCTTGTCTAATTCCAGCTGGGCTTTTGCATCTGTGAGAACCTGAGCTAACCCACTAATGGTAAGAGCATGATGGTAGTAATGGTAACAGCCATGATGTTGACTGTGTAGCCCTGAGTCAGGTTCTCCAGTCCAACTTGTGATTCTGGGAGCTATTCATTACCCACTCCAGTATTCTTGTCTGGGAAATCCCATGGACAGAGGATCCAGGCAGACTAGAGTCCACAGAGTCACAAAGAGTCGGACATGACTGAGCATGCACGCATCCATGCAGTAGGGAAAATAGAC TCONS_00246979 . 5' 4391 TCONS_00246979 . 5' 4391 EMBV3_00561 TACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTATGACGAATCATTCACGGAC Gene GeneID:100313454|MIR382:NR_030895:102_cdna Constitutive 0 NULL GeneID:100313454 21 GENE MIR382 bta-mir-382 microRNA mir-382 EMBV3_26953 ACCGGTCTCCTCCTGGATGATCAGGCTTCAGTTTTGCTTCAGGGTGACACGGAACTCTAA Gene GeneID:504797|TRERF1:XM_002697239:421_cdna Constitutive 0 NULL GeneID:504797 23 GENE TRERF1 NULL transcriptional regulating factor 1 EMBV3_36144 TGCCAAAGATGTTTTATACCTTGTTTACATGAAGAGGCTACTACAATACTTATCCGGGAC Gene GeneID:525116|RUNDC3B:NM_001076874:26_cdna Constitutive 4 NULL GeneID:525116 4 GENE RUNDC3B MGC139450 RUN domain containing 3B EMBV3_41482 GCACTGCCATCTCCAAGGGACTCTACCATCTTGACGCCTCCATTTCAGGATGTCTGCTAA Gene GeneID:281452|RGS7:NM_174169:67_cdna Constitutive 0 NULL GeneID:281452 16 GENE RGS7 MGC137820 regulator of G-protein signaling 7 EMBV3_40991 GCTGAGTATGGTTAAAGCGGAACCTGATGATAAAAAACTAGAAGAGCGACTGCAGGGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19190 GTGGTTTCTCTGGAAAAGTTTAAAGGCAAAATTCTTCAAAGAAGGAACCAAGGTGGAACT Variant GeneID:511575|GPX8:NM_001046088:67_cdna 229^490 1 EMBV3_39200 GeneID:511575 20 GENE GPX8 MGC133953 glutathione peroxidase 8 (putative) EMBV3_25259 GGTTTCATACCTCAGGACTTGTAAGAGTTTATTGATCCTTTTCTTTATCCAACTCATGCT Gene GeneID:534712|RB1:NM_001076907:157_cdna Constitutive 2 NULL GeneID:534712 12 GENE RB1 P105-RB PP110 RB11 retinoblastoma 1 EMBV3_19876 GAAAGAAGTTTAAGCTTCACCAGTGCTGCTCCTGACCAATGGACATATGTACAAGTTCGG Gene GeneID:539665|LRRN3:XM_002686810:5_cdna Constitutive 0 NULL GeneID:539665 4 GENE LRRN3 NULL leucine rich repeat neuronal 3 EMBV3_37630 TGCTGAGAAACAGGCTCTTATTCCAGAGGAAGGATCTCACAGGATTTTTGGCTTGATGGG Gene BVT0102_121176 + 0 NULL GK000013.2:11470770-11543627 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00047035 1 XLOC_027171 NonCoding TCONS_00047035 XLOC_027171 NonCoding NonCoding - 13:11534360-11535126 - TSS34211 766 1 TCONS_00047035_2 54 1 0 0 0 0 0 5.37116768087826e-06 0 0 0 0 0 0 0 0 0 0 0.00049995846760281 0 0 0.00016772741078194 0 6.23526417613079e-05 0 1.19765716016354e-05 0.000196973500086573 4.52251257115394e-06 0 1.91225763951449e-06 0 0 0 0 noncoding ATGTGTAAAGAAGTGTCACTGGCAGTAAGTCATAGAATTTTTAAATGGAAAAAAGTCAGTAATGGAAAATTTGGAAAAAAAACAGATATTCTTCTGCAATGTACTTTATCTTAGAGGTAGAAGTTGTTGAAATACTGACCACATTATGCCTTTGCAATGAGAGCACAGATAGAAAGGTTAATACATGCAGAAGGCAACTGAAAAAAAATCAGGGGGGAAAAAACATTCTAATTGTGATGCCTTCGGGGTTTTGCTATAAATGAACCTGTTGGACTTTTTCCTGATGCCAGAAAAGGGGCTGCAATCTAGTATTATTTATGTTTCACTTATATTTATTAACCCTGTTATTCCAATGCTTTCACAATAAACATAAAAATCCATGAACTGCTTCCAACTTTTCTATTCATTTCTCAACAGTCATCACAGTGTCCCATCAAGCCAAAAATCCTGTGAGATCCTTCCTCCGGAATAAGAGCCTGTTTCTCAGCAAGCTTTCCAACAGGATTTTAACTCTTCTATGTAGCTGGCAAAAACATTGAACCAGCAAATTGAAAACACACAGTGGTCTGTATGCTTGGGTCTTAATGAAATTTCCCATGTGTGCTATTCAGTCAGCTTCATACATTCTCAGGACAGGTACTGAAGAGCTGAGGACTCAGGCAAGTGCTCAGAGGTGAGAATTGGTCCAGGATACACAGTGTGTGAATTCACAGTCTAGAGAGTGGACCCAGCTGTGGGTCTTCTCTTTAGCAGGAGGGCTCTTCCC TCONS_00041968 TCONS_00041969 . 5' 8502 TCONS_00041968 TCONS_00041969 . 5' 8502 EMBV3_01425 GCATTAAGTCACCGTAGAACATAGGACTGAAACCTCAGTTCGCTCTGTGATGTCAAGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00375 GACCCTGCTGGGCATCATCGCCCCCTTCTGATCACGCGCGCCAGCTGACCAAGAACATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30166 ATGAAGTTACAATAAAATATAAAGATGAAGTTAATGGCCAACCAAGACCCCTTGAATCAA Variant GeneID:505171|TFG:XM_002684718:29_cdna 493^576 1 EMBV3_35573 GeneID:505171 1 GENE TFG MGC129137 TRK-fused gene EMBV3_07520 GGCACTGCTCACCGAGCCTGCCGCTTCCAGGATTAAGGTAAAGAAGGGGCTGCACGTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42792 GAAAGAGAAAGAGGCAGAAACAGACAGATATGGGGGGTGAGTTAGAGGATGCCTTCAAGT Gene GeneID:407152|PTPRC:XM_002694273:283_cdna Constitutive 1 NULL GeneID:407152 16 GENE PTPRC cd45 protein tyrosine phosphatase, receptor type, C EMBV3_23338 CAGGGCCTGGGCAATGAGGGGGCAGCCTCTATCAATACATGAGATCTCTGGTTAAGTATA Gene BVV0102_077181 + 0 NULL GK000023.2:48776699-48826504 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09113 AGTGACTGCGCCTGGGAAATCGTCAGACTGGAAATCATGAGAGCCTTGTCTTCATCAACC Gene GeneID:100299481|LOC100299481:XM_002689532:181_cdna Constitutive 0 NULL GeneID:100299481 8 GENE LOC100299481 NULL similar to interferon, omega 1 EMBV3_07416 TGCTGAAGTATGAGTACCAGCCCTTCGCTGGGAAGGGAGAAGTTCGGAGCTGTCTTCCTG Variant GeneID:533223|WDR1:NM_001046346:9_cdna 375^433 1 EMBV3_09571 GeneID:533223 6 GENE WDR1 MGC127353 WD repeat domain 1 EMBV3_32745 GTGGAACGCTATGCCCTGGTGTTTGGAATCAACACCTTCATTGCCCTGGTGATTCAGACT Gene GeneID:537280|SLC19A3:NM_001102198:142_cdna UTR3_Alt 2 NULL GeneID:537280 2 GENE SLC19A3 MGC165775 solute carrier family 19, member 3 EMBV3_41830 GCATACTTCAGACCATGGGATTGCAAAGAGTCACACACAACTGAGCAACTGAACTGAACT Gene BVV0101_010680 + 0 NULL GK000013.2:11362601-11392547 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041949 1 XLOC_025564 NonCoding TCONS_00041949 XLOC_025564 NonCoding NonCoding - 13:11371091-11372471 - TSS31342 1380 2 TCONS_00041949_1 41 0.276811594202899 1 0 0 0 3.35288921351983e-05 0 1.43106686116472e-05 5.18413969266794e-06 1.901647733874e-05 8.31531053777787e-11 1.14349751925338e-05 5.96303009830801e-06 8.00327627278577e-05 4.53988083655393e-13 4.15838577826829e-05 3.40869401808197e-06 0 0.00166827038592474 0.00013233694685226 0.000544241488787881 0.000175116199594899 0.000208447396253815 3.73966202213123e-05 0.000425881396083645 0.000289181273136403 0.000279410538598669 0 0.000148459529126837 8.48300571023637e-06 7.41443404611999e-05 1.14132294498945e-10 1.03964509408072e-05 XR_236874.1 LOC505099 PREDICTED: Bos taurus uncharacterized LOC505099 (LOC505099), 0.0 2459 100.00 0.98695652173913 0 noncoding AGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCTTGCAAAGACTGATGCGGAAGCTGAAGCTCCAATACTTTGGCCATCTTATACGAAGAACCGATTCATTGGAATATACCGATTCTGGGAAAGTTTGAAGGCGGGAGGATTCAGGGCCAACAGAGGATGAGATGGTTGGATGGCATCACCAACTCAATGGACATGCATTGTAAAACCTTCAGGAGTTGGTGATGGACAGAAAAGCCTCGCATACTTCAGACCATGGGATCGCAAAGAGTCGCACACAACTGAGCAACTGAACTGAACTGAACTGATGTTGATATTTTCATAAAATTTGAAAAACAGTGTAGATGCATGAAAATATATGAATAAAATTATATGAAACAGAGGCTTTGCTCATAGTATATCCTTAAGAATACTGATATATTACTGAACTATTGTATATAAATTCTAAATATATGTGTTTCTCCATATACCTTGTTATACTTTTTTTTTTTTCTGTAAAGTTTGTTCTTGTCTAGGAATGTCTCACTTTTTCCTTCTTCCTCCTCTACTTTTTTTAATTTTTTTTCTTTTTAATATTTACTGTTAACCTAATTTTTCCTTGCAGAACACATTTCTTCAGGGTCTGTTCTTTCAGTCCATCTCTCTCTGCCTCTATTGTGAACGTGTTTGCTTATGGCTTTCTGTTTAGAGTGTTTGTGGCTTTCTTCATGATGCTTGCCCTACTGCTTTACCCTTGTTTTTTTTTTCCCTGTTTCTTAGAAGGAGCTGATTTTTTCCCCCGTTTCATTGGCCTCTAGCTGTTTGACAAACAGAACAGAAGTAGCTTATCCTGTTTGCAGTTCTAGCCCATCTAAATAAGGTTCTGCTAAAACCTAAACTTTCATATTTCCCTTCCCAAGTGATAATCCATGTATATATTAATCATGGAACCAAATTTCAAAATATAGCAATTAATTTACATGTCTTAGTTTTTCAATAGTGCTCTAAACTACCGGGGATAAATTATTACTCTAGAACATTTTGGTAGAGAAAGTAATCTAGTGGGTGTCCTAGTATTTGTATTGCAGTCAATTAGGGGTAAAGAGAGGAGCATCTGGGGCTTCTGATGTCATCTGTCATCATCCTTTCCCCATGAGCAGGTCAGTCAGTGGCAGAAATGGGATTTGAATCCACCTCTGAATGACTCCAGAGCCTGTGCTCTTTGTGTTAGATCATAGAGGAATGGGGGATATTATAATTTTTATTCAGGTTGATACTTGTTATATTCTTCAAGCTCTTATTTTCTTCTCCAGCATGTCCTGAAACCAAAGTTAACGAAGCTAATGAAGGCTTCTCAGCAATCCAAGAGAAACAGGAAGTTATTTGAAG TCONS_00041931 s 3' 2052 TCONS_00041931 s 3' 2052 EMBV3_23965 TAAAAGACCTCTTTGTCTGTAAAGACTCTTCGAGGAGAATGCCCCCTCACTGGGGTTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04229 AGGTCCCTGGGGGAAAATGTCATTCTTAATGTGGCTAGAAAGCAAGTTAGAAATTTCAGC Gene GeneID:538938|SEC62:XM_002684930:79_cdna UTR3_Alt 2 NULL GeneID:538938 1 GENE SEC62 TLOC1 SEC62 homolog (S. cerevisiae) EMBV3_12642 GCCAGTGGCTTTTGATGGATGTTGTAACAGAAGATCTGTGAAGGAGATGGTGGTTTGCAC Gene BVV0102_066520 + 0 NULL GK000005.2:38809941-38857637 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191642 TCONS_00191647 TCONS_00191643 TCONS_00191646 TCONS_00191644 TCONS_00191648 TCONS_00191649 1 XLOC_116979 Coding TCONS_00191649 XLOC_116979 Coding Coding GXYLT1 5:38767288-38815601 j TSS143577 6795 1 TCONS_00191649_2 353 0.0188373804267844 8 0.859517304189435 1.77473083084424e-16 1.28663287037115e-07 3.09821560670075e-05 1.37144249940079e-21 0.000260558117790837 1.23748498942247e-46 4.05136011902875e-06 0.000287807389741647 3.08228021383253e-05 0.000140520284821472 0.000269809354396594 7.94702793191737e-05 2.27134732754596e-05 3.96026016382123e-05 1.87680920710642e-10 3.05145595660535e-09 0.00236549742063885 0.00264349273625748 1.7012503543463e-49 4.24269937534461e-05 2.24718948247357e-07 0.000330812107000827 0.000606468235048341 0.000458845823413124 0.000163284848546421 0.00032818998727919 2.48753734773663e-05 0.000248822309085669 2.38757409774507e-05 0.00105032183438931 XM_005206430.1 GXYLT1 PREDICTED: Bos taurus glucoside xylosyltransferase 1 (GXYLT1), 0.0 1.203e+04 100.00 0.981751287711553 NM_173601.1 GXYLT1 Homo sapiens glucoside xylosyltransferase 1 (GXYLT1), transcript 0.0 2628 81.61 0.389403973509934 TCONS_00191649_2 sp|Q4G148|GXLT1_HUMAN GXLT1_HUMAN Glucoside xylosyltransferase 1; 0.0 702 93.20 0.997167138810198 1 coding 0 0 0 1 0.018550559738052 0.895603825483969 0.0165013172357119 0.832513044348752 CTTGAACACATTTCCTCATCAGTTACAAAGAGGTGTAAAGAGTTCTCTCTGTGTTACTGGAATCCCTATTGGATGCTGCCCTCTGATGTTTGTGGAATGAACTGCTTTTGGGAAGCGGCCTTTAGATATGGCGTGAAAATGCAGCCCGTTGAGAGAGTGCACCTAGCCGTGGTTGCCTGCGGGGAAAGACTGGAAGAAACTGTAACCATGTTGAAGTCAGCGCTCATTTTTAGCATCAAACCTCTTCAGTTCCATATTTTTGCTGAAGATCAACTGCATGATAGTTTTAAAGGCATACTTGACAGCTGGTCATTTCTGCAAACATTTAATTATTCATTATACCCGATAACTTTTCCAAGTGAGAATGCAGCAGAGTGGAAAAAACTGTTTAAACCGTGTGCTTCCCAGAGATTGTTCTTGCCATTAATCCTGAAAGAAGTTGACTCACTATTGTATGTTGACACTGATATCCTTTTTTTACGGCCCGTTGACGATATTTGGGCTTTGCTAAAGAAGTTTAATTCCACACAAATTGCTGCAATGGCACCAGAACATGAAGAGCCTCGAATAGGCTGGTATAATCGCTTTGCCAGACATCCATACTATGGGAAAACTGGAGTGAACTCGGGAGTTATGCTGATGAACATGACCAGAATGAGAAGGAAGTATTTCAAGAATGATATGACCACCGTGCGACTACGATGGGGAGATATACTGATGCCGTTGCTTAAAAAATACAAACTGAACATTACATGGGGTGATCAAGATCTGTTGAATATCATATTTTTTCACAATCCAGAAAGCCTTTTTGTTTTTCCTTGCCAATGGAATTATCGACCAGATCATTGCATATATGGAAGCAATTGCCAAGAAGCTGAAGAAGAAGGAATCTTTATTCTCCATGGGAACAGAGGTGTTTACCATGATGATAAGCAACCAGCATTTAGAGCTATTTATGAAGCACTGAGAAATTGTTCTTTTGAAGATGACAGTATCCATTCCTTATTAAAGCCATTAGAACTGGAACTACAAAAGACAGTGCATACATACTGTGGAAAAATTTACAAAATATTTATCAAACAGCTGACAAAAAGCATACAAGACCGTTACGACAGACCGCCAAAAGAAAGGTGATTCGTGGTGACTGCTAAATCAAATGAATTAAAACAACAAAATATCAGAGACTATTGTGAAGGAATAGTCTTAGATGAAGTTTTCAGGAAGAAATTACTCATCTTCAGTATAATTTTTTTCCTGAAGAAGTTAAATGAGCTGTATTTTCATGTAATGAAGAACAAGTTGAAGTCTTGGACCTCAACAAGAAGATATTTTTGATCTCTGATGTTTTATAATGTTATCTGGTATCATTCCAGTATTGACAAAAATCTTATTGAATGGATATAGCCTACAGACTTGGGTTGACTCTTAACTCTCAAGTAGGTAAGAGTAGTAGGGATGTATGGATGGAGAAAATGTACCTCATACACAGTGGAAACACTCAAACTGTGAGTATAGCAATAATCTTATGTCAGCACTAACCTCACTTTAAATGTGTGAGAAAAAAAAAGTTGTTTACAGAAACAGGAAAGGTTCTGTTTCTAAAGAAATGTGATGTAACTGATGTCACTATCGACAATCTGTGTGTGCCTTCATACATTTCATCTCTGTTTAAAATATTTTTGTGACAATCATGTTTAAAAGTGTTTTTAGTTTATATGTAAGCTGCACATTTACGACTGAGCTCTATAAGAAAAACAGTGAAAGTTTGGATTTTTTTTTGTGTGTATTTGTGAAATGTAGTGTTTTCATTTCTATGTGCTTAACTGTCTTGCCAAAAGTCAAATCTAAGATGATTAAGCAAGTATTTTAGGAAAATTTTTCTATCACTTTAAATGAAAAATTTCAGCTTTACTGGGCATTCTGGAAGCAATAAATAGGCAGATAATAAAGTGAGAACCTAACAAGCATACTTACGTGATGGTGGAAAATGTGGTGGACCAAAATACGGAAGCTATGTCTTCTGTGAGCAGTGATCAATTACGGTTACAGTGGAGCAGGAAAAAGCGGTCCATTGAAACCTCTTCCCTTCTACCTCAAAGTGGCTTTGCAAAATATCTTTGAAGAAGCAAATATACGTATACAACCTTAAGTACATTAGAAAACTTTCATGGATGATTTGGCTTAAGATTGTCACATCTAACTGTAGAAAAAACAGTTTTGATTTGGTTAATGTGCATGTCCTCCTTTTTTTTGAATGTCACTTGAGACAGCTATGTTTTTTATCTTAACAGTAAGAAAAATATTACTTTTCTTAGTGTTTTTGACCTTTAACTGATATAACTATAGATTCTGAGTACTTGGCATGTACTGTGCTGGGGCACATGTCTCTTTACCAAGTACTATGAGGTTAACTTCTTTTTCTCCTTTTGATATTTTAATACTTAAATAGAGAAGAGAAAATCATGAAGGAAAACTGCCACTCTCTGGTCGTTTATGAAGTACCTAAAATAGTGGTGACTGGCTTTATGAAGACACAGTGCCCTCTGTGGGGATGTGAGAGAAGATCTGGCCTCTGGCGCAGTTCAGTCAGGGACAGATTGAGAAAGGAAGGTGTAAGAAAGACGAATCCGAATTTGACAACCAGCCTGGCTCTCATGGGACAGAAGCATTTAGGGAATGCCACAGTGAACATGAGCACTCATGAACTTGTTGATTGTTCAGACTGAATTGGCTAAATAAAAAATAGGATCCCTAGAATTTCAAAGTTTGGAGCAGATAGGATCATTTTTAATAGCCCCGGAGGAGCCCCTTGGCTGCCTGGCATATTAGGCTCTTGTGGGGACCTTGATGAGAATGGCCTGGGCTTCACCTTAGATGACCCTGGTATGCCATATCCAGATGGATCTGCACATTACACAGAAGTGGAGAGAACAGTACAGTGTGGGACTCCTTGTCCAGATTGAACACGTCAGTGTTTTACCACATTTGTGTTATCTGTCCCTTTTTCCTTTGCTGATGTATCTTAAAGAAAATGCCAGTCATCATGTTATTTCACCTGTATAAACACTTTGCTAACTGCAATGACATTGTACCCCCTTTGGCTTCAGTTAATATCAAAGGCACATTTCCCTTATGATAAGAGTGCAAAAATAAGTCACCTTATAATTCTATTTTTAACAAGCACCTCAGATGATTTCGGTGTCATTTAGTTTGGGAACCACTGGAAATCATTCTGCCAACTTGAAGGTTGAAGTTAGGACCACAGTTCTCAGCACAGTTGGTGGATTATAAATGTGATTCTGAAATGTTAGTGGAAGTACTTGGGGTTATTTACAAAATATGAATTTATATTATTAGGTTTCTTAGGTTTAATTTTCTCAGTGAACAGACTCTTAGCCCCATGGGCTCTAGTATGATTGAGACTGGGTAGAGTGTGTCATAGTTTAACTGGACTGTGTGCTGTGGTCTCACACATGTTGTGCCTTATTTATACCATCACACACTCTCCATTGTGGGGTCAGTTGGAAGGTTCTTCACTTGGTTTATTCAGTCCTGACCTAATTTTAGCATTTTACCATAAATTGGGTTATGGTGAAAACTCTCCACTGAGGGACTGTTTTTACCTAAAATTTAGGATATCACAGAAAGTCCTTAACAATATTAAAATGAATTTTCTGAATTTATCTTTAGATAAACTTTTTCCTTGAGAAGTTTCAAGAAATACAGTTTCTCAGCATTAGTGAGGTTAAATTCAAGAGCAGCTTAGAGAATGTTTTATATTTCTTTCCTTAAGACAGTATATCTATGCAGTGTATTTGAATTATATATTCTTTGAGTCTATGTCTTAGAAAAAATTTGACCTCAGAATTATCTCTGGGCTACAGTGTTACCAAAGTGAAATGACTTTATAATGTAGTCAACCTTCATTTATATGAAGTTGCCATATTAGAGGAAAAAACCTTTAGAAAATATATATTGTGATTTACATTTTAAGAAAATACATATTTTGTTTTTTCCCCCTGGGAAGAGTAGTTCATAATGTATATACAGTAACCTGGTTATCTCTGGATACTTCAGAGCCTGAAACAGTTTTACTGCTTCACTGCTCTCTGATTTTGCCTCAAGTCAAATGTTATTGGTATAAAGGAAAGAAAACCAAACTGAACTGGATCTACATTCTCCTCTTGGTTAGGGGCCAGGGCATATCATTCACCTTCTCTGTACCCTAAGTTTGCGAACAATCAGCGTGCCTTTCCCGCCTCACAAGACTCGGCAGTCATGGAGCTGTGAGACCCAGAACAGAGAATGGGTTAGCTGCGTGGCTTGCCTCATGCCCCTCCAGCCTTGCTGCTGAAGTTCTGGGCTGCCCTGTTGCCTCCTGTACAGATCATTCTGTTTTAGACTGAATGTTTGCTGACGTGCATTGTATCTCCAGTGTGAATTTGCTTAGCTTGTGTAAGGAAGAATTTTTAAGGAAGAGAAAGCAAAGAAAAGAATGATGTAAATGAATGATTAGAGGAAGAAGGGAAAGAGAGGAAGTGAGAAAAGTGAGGAAGTAGAAGGGAATAAGAGTGAGAATGGCCAAAGGCAGAGAAAGAGAAGAGTGGCTAAGAGTGGGGAATAGGGAAGGCAAGAGGGAGGGAAGTGGTGTGGGGACAGTCACTTCTGAAGCGGCAGCCCCCTAGCCTGTACTGCCGTCAGCTTGCCTTCCTCTGTTTCAGTTCATGGCCCTGTGGGGTCAGGCGTTCATGGAAGGGGCAGCCAGGCTACCTCTGTTGAATTTGTTTGTTTGGTTTGTTGATAGTAGAGTCTTTCCCCAGTTACTCTGCTCACTGATCATTTAGTGCTATGATTCTACATTGTAGTTTTTTTTCTTCTTTTTATATATTGGATCCCAGTTTGTGACCTAAGACCTGTGGAAACAGGATGACAAATATCTTCTTTTTTGACATCCTTTAGTCCTCCCAGATAATGGATTATGCAGGACTGACCACATAGATCATACAGGAGGTTAGAGTGGAGGGCATAACCTTATTAGATCTGAAGGGGGCCCAGGAATCTATCTGGTTTTCTCAGATGATACTGATAGGAGGCCAGGTTTGGGAACCACTGCCCTGCCTTGAGTGGCAGTTTAAACCACACATCACATCCATTGATTCCTCAATAGGTATACTTCCAGGTGGAGTGTTAGGAAGGGATTCAAGAGAACAGGAGACAACGGGAGTACATTAAATGGGAAAACCTTAAAAGAGGGTAGTCAGTGTCTTCTTTTTTAGAAGTTTATATTGTAAGGAGTAAACATCTTAGTGTTAATCTGTAGCGATTTAGCAAGACCACTAATTTTTTTCTTTTACTTTTTGATTTTGTAAACAGAGAAGGAAAGTAGGGGCACACTGTGTCAGGAAAGGTAGGCGCACAGTGTGCCAGTGTAGGAACAGTTGTCAGTTTATTAAATGTAACTTCAAGTGTCTTAAAACAATTGCCTTATTGCATTTTAATCTTTAATAAAAGTAGATTAAATAATGATTAGTACTGTAACAGTTATCCTTTTATACATTGCCAAAGCAACCCTTTTTTGCCTATTAAAGCCTGGCTTAACTGTCCTGATGTTTGTTGTTTCTTGATTCACTGAACATGAAACTAGATTTTTAAAACTAAGTTATATGAACTTAAAGCAGGTGTAAAATGTGGTGCAAGAATTTTTTTTAACTAAAAATGAATATGATGTTAATTTAGATATCTAGCAATTACAGAATTATGAGAAGAACATGGAATAACATGTTGAACTAGGCAATTTAAAACTGATTACAAATCAATGTCAGACTTACTTCTAAATGGAAAATATCTATTGTCACCTCATTTCTACCAATAATTCCAAATATCTAATGGGATTACTTTTTAAGATTTTTCTATAACTCCAGTTATCAAACAAAAGAAAGCCTTTGGAAAGATATGGAGAAAAGAAGGAAAATCTCTCACTTCTAATGCTGTGAATGCTATTTGGAAGGTCTAGTCAGACTTTTTAATACAAACTGAACTGATGTGAAGCCTCTGATGATGTGTAGTTTACATATACCTTCTGAATTTGTAAGCATATTCAAATATATAACAGCATAGTAAGTCCTTGTAAAAACTAAAGAGAAGCCAACAGTGTACCTTCCATTTAAGATATAAGTGGACTTTGACTATGATGGAAAATAGCTGTTTTCAATCTGTGTATAAAATTTCTTCAGGGAATATTGGGGTGTTATGCAAAAATAATTCAGGTCTTGCAGCTTTGCTGTGGACTGTGTCATCCATTTCAAAGTCAACAGAACACACGTGCACCACATTCACTGTCAGTTTCTGAGGGCTGGGCCAGTGGCTTTTGATGGATGTTGTAACAGAAGATCTGTGAAGGAGATGGTGGTTTGCACCTGTTCCTGAAATCAGAAACTGGAAGGTGTTTCCATTTTTCACAAGTATTTGCATAAATGTGTTAATATTTTGGGTAGTAATGATTCTAAAGCTGCAAGATGGCATTTTGCTATACTGTGATACATAGCGATTACTACTCTTAAACCACTTTTTACCTTAAAATATTATGATTTTAGGATAAATTGAATATCCTCCTCCAAGTAGTTTGTGTGTCTTGACATTTATTAAAGAGAAGGTGAGTGCAAGATTATAGATTCAGATATAATGTGAGAATAATGTCAAGTTGCTTTGTTCTCTTGGGGGGAGTTCATATCATCTTTTTCACTCTGTGGTGTTATTAAATGAACATATACTCAATAAATGTCTGATTTCTTCAAA EMBV3_09490 TTCATTGGGAATGCGGAGTCTTAGCCACTGGACCACCAGGGAACTTCTCCAAAAGTCGGT Gene BVT0101_014322 + 0 NULL GK000018.2:60611064-60622036 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084610 1 XLOC_051620 NonCoding TCONS_00084610 XLOC_051620 NonCoding NonCoding LOC100848793 18:60619783-60730066 o TSS63350 2195 2 TCONS_00084610_3 115 0.618678815489749 2 0.980114615259063 1.34300764300525e-05 0 0 0 0 1.62963472243951e-07 2.1254576279555e-05 0 0 0.00012950961183069 5.21455244911689e-06 6.43461648208999e-05 0 0 2.2351685957804e-06 0.00153335437513629 0.00061039039500959 0.00057916778559202 0 3.27628871907461e-06 3.22704446087638e-06 0.000860532574208294 0.000368494880553742 0.000911425528664253 0 5.06814173739085e-06 1.06772611080631e-05 0.000162639268703837 0.000113310915430796 0.000153479168658545 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1003 90.77 0.329384965831435 0 noncoding 0 0 0 0 -0.531680522189523 0.198066670832067 -0.140208006985712 0.0726367237841322 ATTGAAACACTAGAAACCATTCACTTTTATTAATAACCATGTATTAATTTCACACAAGGTTGAAATTAAACATTTTACAATCCACAGTATGATCCATGATTAAATCAGATTAAAAGTACAGAGAAATATTCATTTTTCTGATAAAAGGATGTGAGGATTATTATGTTTATGACTTACAAAACAAAGCCTAGGAAACATTTAGTAAACAAGAAATACACTAATTACATGCCTTTTCTGGAAATGGTTTCTAATACATTTCTAGGTTATCACAGAAGCTGTGTTTAGTTCAACATTGTCAAGTAATATACTTCACTTATGCTCATATTATAAAGATAAATCAATATTGTAGTGAACTGTGATTGTGTTCTTACAGTTCAAGTGATATAAGTATTGAAAATTTAGAACCGACTTTTGGAGAAGTTCCCTGGTGGTCCAGTGGCTAAGACTCCGCATTCCCAATGAAGCGGATGTGGATTCAATCCCTGGTCAGGGAACTAGGTCCCACATGCTGCAACTAAGATCTGATGCAGCCAAATAAATAAATATTAAACAAAAAACAATAGAACCAACTTCTTTCTTACTTTAATACATGGAAAGATTTCATGATCACTTATATTATGGCAACCTTCCAGGATACTTCATATGAATAACAAACACCTTCAGTTAGATGTTCATTGTACATTTTACATTATGGTATTGATGAAAGTGAAACAGGAGAGTGAAAAAGTTGGGTTAAAGCTCAACATTCAGAAAATTAATATCAGGGCATCCGGTCCGATCACTTCATGGGAAGTAGACGGGGAAACAGTGGAAACAGTGTTTAACAGACTTTATTTTTGGGGGCTCCAAAATCACTGCAGATGGTGACTGTAGCCATGAAATTAAGACACTTAGTCCTTGGAAGGAAAGTTATGATCAACCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCATCAAAGGTACGTCTAGTCAAGGCTATGGTTTTTTCAGTGGTCATGTATGGATGTGAGAGTTGGACCGTGAAGAAAGCTGAGCACCGAAGAATTGATGCTTTTAAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAGATCGGTCCTGGGTGTTCATTGGAAGGACTGATGCTAAAGCTGAAACTCCAATACTTTGGCCACCTCATGTGAAGAGTTGACTCACTGGAAAAGACCCTGATGCTGGAAGGGAGTGGGGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGCTGGATGGCATCACCGATTCGATGGACATGAGTTTGGGTAAACTCCGGGTGTTGGTGATGGAAAGGGAAACCTGGCCTGCTGCAGTTCATGGGGTCGCAAAGAGTTGGACACGACTGAGCGACTGAACTGAACTGAAGTGATCCTTCATCTTCTAATGGAAAATAGATAGAAATGGTTGCAACACAACATAAAAAGGCTAATCTTTGAAGCATAAACCATCAAAAACTTTTTTTCATTAACACTAGAAACAAAGCATCAGATCAGTCACTCAGTCGTATCCGACTCTTTGTGACCCCATGAATCGCAGCAGGCCAGGCCTCCCTTTCCCTCACTAACTCCCGGAGTTCACTCAGACTCACGTCCAGCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCTTGGCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTTGCGTGAGGTGGCCAAAGTACTGCAGTTTCAGCTTTAGCATCATTCCTTCCAAAAAAAATACCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCTTTGCAGTCGAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGCGCTCAGCCTTCTTCACAGTCCAACTCTTACATCCATATATGACCACAGGAAAAAGCATAGCCTTGACTAAACGAACTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGTTATCTTGAATTACATTTATTTTGCTTTTCACCTAATCTCAAATCAAGTCATTGTGAACAAAGATACATTGCTAATAAGTGTAGCCTTCTAACTGTCAACCTTTATCTCACGATCCTGGCTAATATATCCATTTTCTGTTTTTTAACTATGGATTGCT TCONS_00084616 s 3' 3365 TCONS_00087414 r 5' 7956 EMBV3_08736 GCATCGGACAAAACTTTCTGCTATTGCTGCTCTCAAGGAGTTCACAGTTTAGGGGGCTAG Gene GeneID:281349|NEU3:NM_174122:4_cdna Constitutive 1 NULL GeneID:281349 15 GENE NEU3 NULL sialidase 3 (membrane sialidase) EMBV3_16236 GCCTACCTCCCACCCCCCAGAAAATCAACTGCCAAATCTTGTGCTATAAACATAGTCCCC Gene BVV0102_119261 + 1 EMBV3_34724 GK000002.2:5167355-5181036 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101538 TCONS_00101539 1 XLOC_061700 Coding TCONS_00101539 XLOC_061700 Coding Coding MAP3K2 2:5082917-5176078 j TSS75860 12032 1 TCONS_00101539_3 591 0.0609208776595745 17 0.871028338342636 3.17313006678323e-05 5.65434354610817e-05 5.46406462658079e-05 7.04536199174692e-06 3.21061394243332e-05 1.89056866641236e-06 1.45536473288966e-05 1.70927427287727e-05 1.70746080739363e-08 3.97268908006832e-05 7.08670537768958e-06 4.18301510098653e-06 2.67730083531792e-06 5.98102334799125e-06 2.6164035631144e-06 0.00259648852460504 0.00108683981603531 0.0030450759743509 0.00015725957124363 8.51383180495123e-10 8.07152323357948e-06 0.00107985035932143 0.000726913441171445 0.00140525216719093 3.12101899728237e-05 3.51616336626812e-05 6.98161190868799e-05 0.000121142923906159 0.000171684415369224 0.000219906352482037 XM_002685232.3 MAP3K2 PREDICTED: Bos taurus mitogen-activated protein kinase kinase kinase 2 (MAP3K2), mRNA. 0.0 1.623e+04 100.00 0.747839095744681 NM_006609.4 MAP3K2 Homo sapiens mitogen-activated protein kinase kinase kinase 2 (MAP3K2), mRNA. 0.0 8395 80.44 0.747755984042553 TCONS_00101539_3 sp|Q9Y2U5|M3K2_HUMAN M3K2_HUMAN Mitogen-activated protein kinase kinase kinase 2; 0.0 1167 93.05 0.996615905245347 3 coding 1 1 1 1 -0.0212407804697218 0.901277175105769 -0.0487471249869563 0.594406845654763 CGGGGGTCCTGCGGCCCGCAGCGGCAGCGGCGACGACGACGACTACCGGGAGGCCCGGCGCTCCCAGCCGCGGAGTCGTCGCTCCCGCCCCTTCTCCAGCCTCGGCGGCACCCGGCCCGCGGCTTCCTCCTTTTCTGCCCAGCTTCCCGCGGGCCTCGGGGCCGCGGCGGCGAGAAGGAACGAGGGGCGCCGAGAGGCCCCGGCCGGCCGCCACGGTCCACGCTGCGCCCGGCGCAGGCTCCATGTGAAGGAAGGCCGGGCCTGGCCCCCGGCCCGCGCCCGACTCCTCGTGCGCCCCTCCGGTCCCCGGGGGCCCGCAGCCTCCCTCGACCGGGGGGCGCGGTGACAGGCCGCGCGGGTGCGGAGGGGTGGGTCTGCGGCTCCCTACGTCCCCGCGGAGCGGCGGGCCACAGAGAATGCTGATGGGAGAACCGTTTCCCTAATTTCCAAGTAGTCAAGCTGATTGCCATGATGGATGATCAGCAAGCTTTGAACTCAATCATGCAAGATTTGGCTGTTCTTCATAAGGCCAGTCGACCAGCATTATCCTTACAGGAAACCAGAAAAACAAAGTCCTCATCACCAAAAAAGCAGAATGATGTTCGAGTCAAATTTGAACACAGAGGAGAAAAAAGAATCCTTCAGTTCCCCAGACCAGTTAAACTGGAAGACCTGAGGTCTAAAGCTAAAATTGCCTTTGGACAGTCTATGGATCTGCATTATACCAATAATGAGTTGGTAATTCCATTAACCACCCAAGATGACTTGGACAAGGCTGTGGAACTGCTGGATCGTAGTATTCATATGAAGAGCCTCAAAATATTACTTGTAATAAATGGAAGTGCACAGGCTACTAATTTAGAGCCATTGCCATCACTAGAAGATTTGGATAATACAGTATTTGGAGCAGAGAGGAAAAAAGGACTTTCTGTAGTAGGTCCCACTAGTAGAGATAGAAGCTCCCCTCCCCCTGGATACATTCCAGATGAGTTACACCAGGTTGCCCGGAATGGGTCATTTACCAGTATCAACAGTGAAGGAGAGTTCATCCCAGAGAGCATGGACCAAATGCTGGACCCATTATCTTTAAGCAGCCCTGAAAATTCTGGCTCAGGAAGTTGTCCATCACTTGATAGCCCTCTGGATGGAGAGAGCTATCCAAAATCACGAATGCCTAGGGCACAGAGCTACCCAGATAATCATCAGGAATTTTCAGACTATGATAACCCTATCTTTGAAAAATTTGGAAAAGGAGGAACTTATCCAAGAAGGTATCATATTTCTTATCACCATCAAGACTATAATGATGGTCGTAAAACTTTTCCAAGAGCTAGAAGGACCCAGGGGACCAGCTTCCGCTCTCCTGTGAGTTTCAGTCCTACTGACCACTCCTTAAGCACCAGTAGTGGAAGCAGTATCTTTACCCCGGAGTACGATGAGAGTCGAATAAGAAGAAGGGGAAGTGACATAGACAATCCTACTTTGACTGTAATGGACATTAGCCCACCCAGCCGCTCACCTCGTGCTCCAACCAACTGGAGATTGGGCAAATTACTTGGCCAGGGAGCCTTTGGCAGGGTCTACCTCTGTTACGATGTTGATACAGGAAGAGAATTGGCTGTTAAACAAGTTCAGTTTGACCCAGATAGTCCTGAGACCAGCAAGGAAGTAAATGCACTTGAGTGTGAAATTCAGTTGTTGAAAAACTTGCTGCATGAGCGAATTGTTCAGTATTATGGCTGTTTGAGGGATCCCCAAGAAAAAACACTTTCCATATTTATGGAATATATGCCAGGGGGCTCCATTAAGGACCAATTAAAAGCATATGGAGCTCTTACTGAGAATGTGACCCGGAAATACACCCGTCAGATTCTTGAGGGAGTTCATTATTTGCACAGTAATATGATTGTTCATAGAGATATAAAAGGGACGGGAATGAAGTCTGTGACAGGCACACCGTATTGGATGAGCCCTGAAGTGATTAGTGGAGAAGGCTATGGCAGAAAAGCAGATATCTGGAGCGTGGGCTGTACTGTGGTAGAAATGCTAACTGAAAAGCCTCCTTGGGCCGAGTTTGAAGCGATGGCTGCCATCTTTAAAATCGCCACTCAGCCAACGAACCCAAAGCTGCCACCTCATGTCTCCGACTATACTCGAGACTTCCTCAAACGGATTTTTGTAGAGGCCAAACTGAGGCCGCCCGCCGACGACCTGCTGAGGCACACGTTTGTGCACTGCCACTAGCGGCCGGGGCCTCTGTGCGCCTGCCCAGCTCCCTGCTGTCCACGCACCCTCTCTCTGACTGCACTTTTCCTTGTTTATAACAGAGAGATGCGGAGGGAAAAAGACAAGAGGGAAAAGTGTTTCTCTTGATTCTTGGTTAAATTTGATTACTAATAATAATAGTAACCTAAATTTTTTATATTTAATCTTCTTTTTCCCTTATAAGAACTTGAAGCTTTTTTTTTTTTTTTTAATTTTTATAATGTACTGATGTGGTTCAGAGACATACAGCACTTTAGTACATAGTCACTCTTTTTAGTACAAAAAAATCATTGGAATACCTAAAGATTGTAGAGTCTTTCCCTGTGTCACTGACGGATTGGCAGTGATGGGGAGACAAGGAAAACGAGAAGAAAAAAATGATGTATAATTTGTAGTTTTTAGTGATAGTATTTAAAATAGATTCTCGTTTGTGGGGTTGAGCCCTAAACTTGAGTTTAGGATAGGTACTCAACTGAAAGAATATAGGTTTCTTCTTGTATCTGTATTCTTTAGATCCTAACCTCTGTCTACCAAGCTTTTTGCTCAGTAGGAATCTTGATAGAAAATATGAATCTCTAGAGGAATGTTTATTTGTTAATCCTAACCAGTATAATAAGCAAATACACTATAATAGATCCATATTACTGGAATCTATCAACCTTGAGGGATAGCTTTCTGCTTTAAAAAAAAAAAAAAGATACTGTTTTATTTTAAAGCAGATATGTGAAGTCAATAAGCAAATTCAAATTAAAAGATAGAAGACTGCTCTAATTAAATGTCTGAGAGTAGAAGAGGCCACATTTGCCAGTCAGCAGAAATGAAAAGAACCGAGTGTGGTTTAGTGCATGTTAAACTGCGTTCTTTACCTGAGGGGGAAGCCCCAAAATCAAGGGGAAGGAGAAGTGAAATCATGCATACTGTATCTTTCCAGTTCCAGCTCCTGATTCCCCGCAGGTAAACATCTTGAGGAACTGAGAGTTTAACCTGCAGTATCCATGTCTTAAAAGCTAATGTTGTGAGAGAAAACCCTTGTTCTTTGGATCACAGAGGACTAAAGTACCTCAGAAAACAGTTACCATGTAAAACAGTGGTTTTCATGGCTGGGGTGGGGATAGTTTTACCTGGCATTTGGCAATGCCTGGAGACATTTTTGGTTGTCATAAAAAAGAGGATGCTAGAGGCATCTAGTGGTTAGAGGTCATGGATGCTGCTAAACAAACTAGAATACACAAGAACAGCACCTCCCTTCCCCATCAAAGCGTTATCCTCCTCAAATATTAAAAGTGCTGAAGTTGAGAATCCCTGAGATCAATACTAGCCCTGGTTATAAACCAAAAATGGCTATGTACAAAGCAGGTTCCTTGCAAAAAGTAAATTTCAGAGAGTGATATAGTGCATAATGAGGGTTTTACAAGAGCAGAGATCACTACTTCAAGTCAAGGGTGAATGATCTGTACAAACAGCAAGGAGCAATCCTTTTCTTACCAGCTGCATATTGCACCCAAATCAGTAACTTTCATTTTGGAAATAAAATTAACTTAAACATGGAGCCTGTTGAACTCAGCCATCTGTATGTATGTATTCTTTCCTCGGAAGTCAGTTCATTCATAATTGTGGGAAAAGAAAGGCATATTAAAACAAAGTATTAACTACTTTAAACGAAGGTTAAAAACTGCCAGATATTTCTAGTATAAGAGCCAAGGACATTAAGCAGAAAGAGACTGCTGGGAAACTCCCACTATCTCTGATGGACCTGTGCTACTGAAAAACGTGAATGATATAGTGATTTGGCCACTTGCAATGTTTTCAGCATATTAGAGCAAGGGCTGAGTACTTTAAGGGTCTAGAAAATAGTATTCTTCCTGGAGGCCCTCAGTGTGATGCCTTTCATGGGATTCATAAGGGACTTGGGTATTTTATTTTCTGCTGAAAGGTATGCTTGTTTAGGAATCGTTTTAAAATACTTTGTTTCTGAAGTTAAGTAGATGTTGGTTTACTGTATCAAGGTCCTATCTGGCATTCCCTGTAGGAATATTTGAAATTCCACTAGCTAGTCTGAGAAGAAGTCAAAGCACAAATACAGCTGTTAAAGCTTCTCCTATTCCCGTATAATGAAAGGAAGCAGCTTGCAAGGAAGAATATGAATTAGTAGCCTACCTCCCACCCCCCAGAAAATCAACTGCCAAATCTTGTGCTATAAACATAGTCCCCAAGGATGTGGATCTATTATAATTTCTTCATCTTTTATGAGTGAAGGCATCTCTTCTACTTGAGCAAGACCATGGTATCTGGACCAGTGGGCTTTTCCTTCCCTTGTGCTGTGTGCTTGTGATTTTCTTTTGGCTCAATTTTGGTCTGTCAGGGTAATCAGCAGTGCAGAATATGAGACAAGTGCTCTTTAAAGAGAAACCTTGGGAGACTGTGAAACCCAAAGCAAAATGTTTGCTTTTTTCAGTCTCTCTCTCTTTCCAAAATGCTATAGAAAATAAAATCACCTGAAAAGAAACTACTATGTTAACACTGCTGCGTAAGACCTTTGTTTTATAAGAAAAATATTAGCTATGGAAAAGTATTGTTCTCTATGTAAAGACTTAAGAATAGATAATAGTTTACAGAGCTATATAAAAATGTGATGTGAATTTATTTCATACAAGTTGTTAAAGGTACCAAAAACACAAAAAAGTTAATATATATAAAAACTAGTAGAACAAAAAAGCTTAAAGTGGGGTGAGGTATGGAAGATCAAAATTAAATTTAAAAAAGAAAAATTTGAAAGCAAACACATCTATCAGGGGCTGTAACACTCCATTTTTTTTTCTTTCTAATAATGCTATGGATCAACAAATGAAATTTGAACTTTTTAGGATGACTATAAATGTGTTTTGTTTTTTAAATGCACAGCCTGATTCTTCTATACTGTAATGTTTCTTTGCTGAGGCTGGAAAATGACCAGACTGCTAACTTTGTGCCTTTAAAATGCGTTCTGCTTTGATAGTGGCAGACTTTTTGGTGCTGGAGAAGATTCACTAGCAGTCTTTTATGTGCTTTTCAGGATATACCTTTCTACTTAGGCCTTGAGAGATTCAAGATGGCATGACTTAGGCTTGGACCAAATACAAGATCTTTTACATTGCACTCAAATTATATTGAATAAAAGGGTTGAAAAATATCATAATGACTAATAGAAATTTTGATGATAATTCTTTAAAATGTATTTTAAAATATACAGACTTTGAAAGTTTCAATATGATGATCTTTAATTTTCCTCATTTACAAAACATGTTTCTAACCTGAGAAACAGTTGAAGACTACTGCCTTAGAAAAGTTTTCAAAGGCATGACAACCTTACATAATTTATATGGATTGAAATGTTAATGCATAGGCTGAACTAGAAAAGAAAAATTAAAACTTATTTCATAGTAAATTGAATTGGCTTTGAAGGAGTCTTTATCTTATTTCCAATAGAAGCTACATTTAAAAGGTGAAATTATTTCTTTAGAGTAGCTTTCTCTGCTACTTCAGTTCTTGTATATGTCAGGTCTGGTGTGTAATATTTCTGAGATGGAAGTATAATAAGGTACATGAAATTACTGAGAAAATACAATTTGAACAGTTTATAGGGACAACCAAGCTTGGGAGCAAAAGCAAATACATTTGCCAGATGCAAACTCCTTGGCCCACAGCAGAGTTCTTTGTCATTGATTTCATTTGGGACCAATAGTTCAATATAAAATCACCTAGTGTCAGCCAAGTATAGGGATCTATCTATTTTTTTTTAACATGGTGAGTCTTTTTCATTTACTTATTCAATATTGTGACTTACTATGTCAGGTATTAAGTTAACTTGTCCTTAAGGAGGTCACAGTCTAGGAGGAAAAAATGGGCAAACAATTGTTTTTTTTGACATATCTTAACTCTGAAAAGTTCGTCAGTGATGTTTTAAACTGTTATTACTTATAAGGTGAGGGGAAAGCGATTTTGGGTGGCCATTGGCTGTGATAAACTGAACAGCAGACAGCAGAAGTGCCCCAGCTGGAGAGATCTGCCACAGGTCAGGCCCCCTCTCGCTCAGGACTCTGAAAACCCAGCCTCTGTTCAGACAGTCCCAGTGATGGGGCATTTATTCCATCACATGGCACTTTTTTTTCCCCTGCTTTTTTCTTTTAAAGAAAATATTTTCTTTTGGTCTGAATTATTAAAATACCCAAAACATTTGATAGAAACTGAATTCTGCCAACAGTGTTTTTTATACTAAGATCAGGAAAATCTTGAGATCTTACTGTTTTATATGAAGTTTGGCCTTTGTTACACATGTATGTAATGTTCATATTTATTTGAATCTTAAGATTGGTTAAAATGTTAATGAAAAGCAGTTTAATTGTTAATTTTTCGTAGTGCCTTTTTCTCTGTATGCCTTAATTTTGTTTTATATCAATAATAATTCACATTACCCACCGCAATGAAAGTTTCTCCAAAATCAGTAGGCTTCAGGAGTTCCTTTGGCCTTAGACTGTGTACTGGCCATTAAACTTTTCTTAATGCCTGCTTCCTCCTACCCTTTTCTACCTCTTTTTTTTGAAAATATGTTAGAAGAGAAACATTAACATTGTTTTGTGATAGACACATTGCAGTTTTACTAGACACAAATTTCTAAGATAAGGATAGAAAGATATTTTAATTCTAAAGAGACATAGTAAATTATTTTCCAAGTTGATTAGTTGATTTTTCAATCACATTGGCACTGTTCAAATTCTTTGCATATCATGTTTCAGTTAACGATTTTCAAAGAAGAACTGGAATGGTGGTTTTTGTCCTAAAGAGATCATTTGAATGGTTTACAAATGTTAAGGCAATGAGACTTAGGGCAATGAGCAAGAAATCCAGGGATAGCAAATTCTAATCCTTACTTTTAAGCTAGCATTTTGACTAAAACTCTAGCTTTTCTGTGAAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGTTGGGGCAGGGGTGGGAAGGAAGGAAAGGTGTGAATGTCCAATTAGATTAGTCTCTGTTCTTGGAAGAACAATTTAAATATGTATAACCTACTGATGTTGGAATGCCAGCACATTTTCCAAAAGTAGCTAGTACAAACAGTTGTTTAATAAAGGTATTTATTGTAAATTGCCAAGCTCTTGGTTGCTAAAAGTAGATTAAAATTGAATTTGTATGTGTGTATAATAGCTTATATATAATTCCTAAATAGAAAGTAATTGGTTTTGCATAGTTCTTCATGAGCTCTTTGGAATAGAAATTCTGCCAGACATTATCAAAACAAGCATCCTTAGCTTACCAAGTGTTCAAAAGGAAATTGTTTTATACCTCTTTTTGGTTGGCTAGGGAAGGCGTGCTGTGAAGCTACTGTTCCTACTTGATAGTCACCTTTAGCTTTGCTTTGACTTCTGCCGCGACCTGGACAGGATGCCATAATAGTTGTGGGAGTTATCGTGCCTACTGACTCTGTGTTCACCTTTCAGAGCTGTAGCGGGTAGTGCGCTCTTAGGGCAGTTTAGAGAACCTTCTCTCGATGGTAGTGAGAGTGGACATGGTTTAGTTTCAGAAAGTTGAGGGAGGAGTCATAGCTATAGTAAAGAATAAACTTTATCTTTGCTTTGTATTACAGTCTCATGTAATTCTTCATATTTTTCAAAATTGTGCATTTTAATTGACAGTAATGCTATTTTTGTTAACAGAAAAGGCGTTAAATCAGTGATTACTATTATTCCCTATGCCTAATGACTTCTTGTTTGTATTTACAATCTGTATTATCAGAATCACTTTAAACCAAAGCTTTTATATTCTCTGCACACATAGCCAAAATGATTAGCACTGTTACTTCTGCCCAATTGTAAGCTAATAGTGTAAAAATGATAAAACAGGTACTAGTAGAATTTGTATCTCAGTCTATCCTTCAAGTTAAAGGACAGGTGCTCGGTGTTTGCATTTAGACATGCAGAATTTACTTCAACTATTAGGGAACTATATAGACATTACAGACTTGAGCTTGTACACGTGCCAATCTTATTAATGTCACTTGACCACAGATGCATATACATACACATCGACACACATGCCTCAGGTTGGGGGCGTACTTTCTTCTTAATGTCTTGACATTTATGAACTTGTGTTTGACTTGAGGGGCATTCCAGGAAAGTTTTGCAGAAAAGTAGGTTATGGACTTTTTGTGCCATAGACATTTTGGAAGACAAGGACAAGTCTGCTCTCCAGCATACATGCAGAATTTGTCCCCAAGTAGGATTTCTGAGTCCCTTAATGCCAGTTGAGGACAGTAAAGTTTGTGACTGTACTGAAAAGCACTTTTGTCTTCACTTATTTGTGTAATTAACTGTTGGTGATTTAGCATTAGCATTGCTTGGAGGGGAGAGATAAGTAACAAAATTACATCTAACTCTGTTAGACACTTAGGCTTCAAAATAGATTTGTCATATTCTCATTTTTCCAAAGACTTTTTTTCCACCTGGAATAAGAAAGAACTAGTGGAAACATTTGCGCTGGAAAGGTTTACAGGCAAAAGAAAGTAGGCCAAACCCTTGGAATATACCCCATTCAAGTGAAAGTGCAGTGTCTAAGGATAAGAATACTTCTTTAAAAACAAGCACTTGTTTTTAATACAGTCTTAGTAAGTAAAAGGTTTACATTTTTTCTATTGCTGTTGGTTTTAAAATTTGCTACCCTGCATTCTGAAATATTATAAAAGAGTTAATACCAAAAATACTTTTAATGTCTGACATCTCTTACATTTCACATGGTTCTTTTTATTCAGATATCATTGTAAATAAAAGTAAACTTGGATAAATATGAGAATAAACTTTTAATTGTTGCAAATTCTGATTATCAATTTGTAAATTTACCCTTTGACCTAATGTACATTTTTAAATGTAGCCATTAAATTCTCTATATTTAATCTGTTAGTTTCTCTCTGTAAATGTTTTTAATCTCAGTTAAATGCTGGGCAGTTTATGTACAGAGGTGTTCTTTTCCTATCAAGGTTGACTTTTTTGCACATTTTTGGAAATGTTTATTTGTACACTGATTTACTACTCTGACCAATAATTGTTGATGGGTGTGTGAGCATCGTGAATGTGTGCATTGAACTACTGTCTGTGTCTCTATGTTTAAACTTCTTTCAAGATGTAGCCATCAGTAACTGCATTGCTATTACTGATTTAGATGGACTTTCATGCTTTTACAAAGTATACTTATCTATGGTTCTATCTTTGTTGAGAACTCAGGAGTTCAACATCACTTTCTGATTTTATATGTATTCTAAAATCCATGACTAAGTTGAAAGTATGCTTGTAACTCTGTGTATTGGGGGATGTGTGTGTGGAGATGTCTTTTTCTGTCTGTAGGTATGTGTATATATCCCAGTAATTTCTTATTTTCATTTCTACATTTTTATGAACTTGTTTTATAAGGGTACTGTTTAGTTAGAATAATTAAATATATATAAAGCTTTCTGAGAGATTATTTACTATATGAATATATTTTCAGCTGGCTGATCAAAACTATTTTCTTAATTTTGTTTTTACCATTCAAAATGTATTTGTATTTCCACAGTTGATTGCAGATTTACTTAGATATCTATCAATTAAAATACTCTTGCAGAGAACATTGAATTCTCATTGAGAATTCTATGAAATGCAAATTAAGGGGAAAAAATAGGTTTTAAGCAGTAGCAAAAACACTGTCCACTAAAACAACCTTTGAATTCTCAGAGCTATGAAAAAATGTGAGAAACTAAATTATCTTGAAGAGATGTCAAGGCTTTTATATCTCCAGTTGCTGTTCGCCTGTCCTACTGTTTTTGAATATTTCCTTTATTCTACCCCAAAGATTTCAACTTTCAGTTTTCTTCTTACTGGGCAAGGTCAGACCTCACTCATAAAACAATATATTGAAAAATTGTGATTCTCTGTGATTAACTATAAATTGGTTTAGAAATGTCCAAACATACATTATTGTGTCTTTACACCGTATTTTGTATTTTAAGTAACTGGCAGAAAACGAATTGGGAATTAAATTTCCAATCTGACAATGTTGTTGTACTTAAGGAGAACCTTGTTTTTTAATATGCGGTATCATGTGAAATTACTTATGTTAGGAATAGAGTCCACTGTTGAAGTTGAATGTCACTAAGCTTATGTTACAAGGAGCCGATATGATTAGAAAAACCTACCAGAAGCCAGATACAGTGTGGTATGTGCCACATTTCATGCACATTTGACTTTGTGTTCATTCAAAATTGTGCTTGTAAAAATGTATAAAATTTTTGAGTTTTACAGTTTTTATGTACTTGTTTTTTCTTGCTGGTAAATAGCTTTTTTTTTAATCTAATGTGAAAGAAACCATGTTTATATTTTGTTAGTGATCAATGACTTTGTTTATATGGAAATTTGTATATGGTTGGCACACATCTTTGTTTAGATTTATCGTGCATGAAGGCCTGCAATAATTAGCACAATGAAAATTGCTTTTTCTTACATGTTCATTTTTTGAAAGATTGTGGTGCAAAGGCTTACTCTAAGTAACCTTCTGGACTATGGAATGAATATAAATGAATGGCACTTTGAGTGTTAATAAAGCTGATATTTATTTCCACTGTGATTGCTTTGTCCACAGCTCTTCTTGGACACACTGTTGTCTCTCCTCTGCCTGCTTTGATCACTCTCTAGGAGACAGCCTAGAAACATTGCAACTAAATCTTCCCAAGATACAAGTCTGTAATGTTCTCCTCAACGTGCTCTGGCATATTTCTCTAGATACTTTGATTACCCAAATCAGAAATTAACGGTGACTAAAAACAAAAAGACTACTGTCAGAGGGTAGAGAGTGGACACTCCCACAGTACTGGAGATCATTTAAGTTACCACTGTCATATACAGGGCAGCCTAGCAACACCAAGTCAAAAGCCTTAGAGTCTTGTATATCCTCTGACCCATCAGTTTTGTGTGTAGGAATATGATTGCAGATGTGCTAGAATATATCTATAAAAGCCCCAAATTGAGTTCTCCATGTTCAGTACTGGGGGCTGTTGTAACAAAGCACTGCAGACTGGCTGGCTTGTTTTGCTGTAGAGGCAATAAGGCCAAAGTTAAGGTGGGCTTCTCAGGTGGCTCAGTGTAAAGAATCTACCTTCAGTGCAGAAGACATGAGTTTGATTCCTGGGTCCAGAAGATCCCCTGAAGGAGGAAATGGCAACCCACTCCGTTATTCTTGCCAGGAAAATCCCATGGACAGAGGAGCCTGGGGCCATGGGGGAGTCTACAGTCTGTGGGGACATGACTGAGCATAAGCACACACAGCAACACGCACAAGGCATCATCAGGCCCGTGCTCCCCCTTAGACCTGCAGGGGAGTCCTTCCTTGCCTGTTTCGAGCTTCTGGTGGCCCCAGGCATTCTTGGCATGTGGCTATGTGGTGGTCTCCCTCTTGTTTCTTTTTTTTAAATAAGGACACCAGTCATGCAGTATCAGGGCCCACTGTAATGACCTCGTTTTAACTTGATTACCTCTAAAGACTGTATTTCCAAATAAGGTCACATTCTGAGGTACTAGAGGTTAGGATTTCAAAATATCTTTTTGTGGGAAACACAAACATACTGCAGTCTGCCCTATGGCTCCTGAAAATTCATATTTTTCCCGGGTACCAAATACTTTGACCTCATCCCAACTTTCACCCCATCCCAACTTCCCCCAAAGTCTTATTCTAACAT EMBV3_42591 GGAGTATCTGTTGCCCATTACTATATGTGTGCAAATAAATGTGGCTTAGACTTGTGTGAC Gene GeneID:100296970|LOC100296970:XM_002696737:66_cdna UTR3_Alt 2 NULL GeneID:100296970 21 GENE LOC100296970 NULL similar to pinin EMBV3_00915 GCAAAGGCAGGGCTCATCACTTTCCTGAGAGGTGTGTTGCTTGTCATTCCCTTGACTTTC Gene GeneID:515027|LOC515027:XM_002693199:380_cdna Constitutive 0 NULL GeneID:515027 15 GENE LOC515027 NULL similar to rCG39399 EMBV3_29819 GGGCAGCGCCGCGCTCGCCCGGGCCGCAGAGAGCTAATCTCAAAGTCATTAGCACAATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40791 TGAAGAGAGCCACAGAGACGCCAATCCTCAAGATCCTCTCATATTTTTGTACACCCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32483 ATAAGTGGGGCTTTGCCGGTGGCTTAGATGGTAAAGAATCTGCCAGCCAATGGAGGAGAC Gene BVV0102_022670 - 0 NULL GK000004.2:118274564-118895524 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20880 CCAGCGGGTTTGGGGCTGGTTCCTACATCCTCTCACCCGTAACACCTTTTTCGTTAAGTT Gene GeneID:510504|GYLTL1B:XM_002693529:129_cdna Constitutive 0 NULL GeneID:510504 15 GENE GYLTL1B NULL glycosyltransferase-like 1B EMBV3_07241 GATCTATAGGCCCCTCCCTATGTAGTCCGTAGTAACCACAGGGTTTTGATCTATTGCCTG Gene BVT0101_068269 + 0 NULL GK000030.2:128230948-128307499 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00249639 TCONS_00218178 TCONS_00224113 TCONS_00129783 TCONS_00249539 TCONS_00116100 TCONS_00071186 TCONS_00148672 TCONS_00250720 TCONS_00080603 TCONS_00066271 TCONS_00124846 TCONS_00078719 TCONS_00020157 TCONS_00135776 TCONS_00129573 TCONS_00242885 TCONS_00253719 TCONS_00207069 TCONS_00177296 TCONS_00209711 TCONS_00175855 TCONS_00023614 TCONS_00252107 TCONS_00218945 TCONS_00148280 TCONS_00008224 TCONS_00161097 TCONS_00123620 TCONS_00248864 TCONS_00010053 TCONS_00107179 TCONS_00238307 TCONS_00239419 TCONS_00090421 TCONS_00131137 TCONS_00039951 TCONS_00021878 TCONS_00238933 TCONS_00038458 TCONS_00178417 TCONS_00063181 TCONS_00062744 TCONS_00252226 TCONS_00122282 TCONS_00209636 TCONS_00186813 TCONS_00251707 TCONS_00037818 TCONS_00064462 TCONS_00178325 TCONS_00161667 TCONS_00233372 TCONS_00079609 TCONS_00153218 TCONS_00123168 TCONS_00065823 TCONS_00063486 TCONS_00200574 TCONS_00063080 TCONS_00199802 TCONS_00109026 TCONS_00238327 TCONS_00040179 TCONS_00038932 TCONS_00010471 TCONS_00021595 TCONS_00142488 TCONS_00115865 TCONS_00135686 TCONS_00089437 TCONS_00161835 TCONS_00208264 TCONS_00198813 TCONS_00170823 TCONS_00116665 TCONS_00078580 TCONS_00122313 TCONS_00177995 TCONS_00020023 TCONS_00251907 TCONS_00222114 TCONS_00109858 TCONS_00199037 TCONS_00110403 TCONS_00219166 TCONS_00007359 TCONS_00079498 TCONS_00031910 TCONS_00251929 91 XLOC_107421 XLOC_152582 XLOC_131641 XLOC_137409 XLOC_078496 XLOC_152482 XLOC_070269 XLOC_042958 XLOC_090552 XLOC_153663 XLOC_049487 XLOC_040985 XLOC_076389 XLOC_047607 XLOC_010835 XLOC_081999 XLOC_078286 XLOC_149548 XLOC_156658 XLOC_125588 XLOC_107070 XLOC_128222 XLOC_105634 XLOC_014281 XLOC_155048 XLOC_132264 XLOC_090162 XLOC_003782 XLOC_097989 XLOC_075172 XLOC_151807 XLOC_005605 XLOC_063090 XLOC_144974 XLOC_146085 XLOC_055202 XLOC_079842 XLOC_023768 XLOC_012551 XLOC_145599 XLOC_022282 XLOC_108190 XLOC_037908 XLOC_037471 XLOC_155167 XLOC_073837 XLOC_128147 XLOC_112864 XLOC_154648 XLOC_021647 XLOC_039186 XLOC_108098 XLOC_098554 XLOC_142854 XLOC_048494 XLOC_092983 XLOC_074722 XLOC_040542 XLOC_038213 XLOC_122226 XLOC_037807 XLOC_121454 XLOC_064931 XLOC_144994 XLOC_023996 XLOC_022752 XLOC_006022 XLOC_012268 XLOC_086913 XLOC_070034 XLOC_081909 XLOC_054222 XLOC_098720 XLOC_126777 XLOC_120466 XLOC_103665 XLOC_070831 XLOC_047468 XLOC_073868 XLOC_107768 XLOC_010701 XLOC_154848 XLOC_135423 XLOC_065762 XLOC_120690 XLOC_066307 XLOC_132485 XLOC_002920 XLOC_048383 XLOC_018155 XLOC_154870 Coding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_29179 CCAATGGGTTTATGACCCAGACAGTCAACAACGCTAACCAGGGCTTTTGTGGCACTATGG Gene GeneID:281129|DSC2:XM_002697689:202_cdna Constitutive 0 NULL GeneID:281129 24 GENE DSC2 DSC3 desmocollin 2 EMBV3_04001 GGCAACTGGCCCTGTAGGTCCTTTCCACCTTGTCAGTTCATGTCTCTGAATCTGGTTTGG Gene BVT0101_018206 + 1 EMBV3_31544 GK000018.2:24519433-24765329 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082628 1 XLOC_051062 NonCoding TCONS_00082628 XLOC_051062 NonCoding NonCoding - 18:24602148-24607119 - TSS62288 971 1 TCONS_00082628_1 83 2 0.805030181086519 0 0 0.000266851388426552 9.40737437545696e-05 1.01692601402981e-05 0 1.80176254273629e-05 0 0.000203145399667603 0 0 0 0 0 0 0 0 0 0 1.4812435627808e-05 0 0 0 0 0 0 0 0 0 0 XM_005218553.1 CES5A PREDICTED: Bos taurus carboxylesterase 5A (CES5A), transcript 2e-168 596 100.00 0.338825952626159 NR_027078.1 LOC283856 Homo sapiens uncharacterized LOC283856 (LOC283856), non-coding RNA. 1e-63 248 79.45 0.294541709577755 0 noncoding 0 0 0 0 0.0355826911127063 0.83517140632554 0.000298014503370206 0.995394161364297 GGCCTGAGGGGTCACTATGAACCAGCGGAGACCTGCTCTCCTGGTGTGGGGGCAGGCACAGCTGGAGCAACTGGAGGGAGAAGGTGACCAGCTGGCAAGCCCCAGCGGGATGGCCAACCCCCGAGAGATAGGAGAGCGGAAGAAACAGCCTGGCAGAGGCCCGGAGATGCCGGCTGGCGTCAGTGATTTCCTGCAGGAGATTCTGCCGGCCGAGTGCACATCATCCTTCTCTCGCCCCTCCATCTTCTCCCATGTGCTGTTCAAATAGACTAAAGCAACCCTGGGTCATGCTCATCCAAACAGTTGTTTAACCTCATCTGTGGCACCCAGGTAGGAGGCAGGATCATCCATTTGGAACAAGAGGGGGAGGAGATGAGATAGATCCCTGAGCACCTGGATTCTGCATTACAGAGCTTCTCTTTCCACACAGAGGAGCCTTTTGGGCCCTTGCTCAGAGATCATTGACTCTTACTTAACACACAGCTCTAATTAGCTTGGTAAAGTACTTTCTGGCACCTAAGCATATTGTTAGTGGAAGTGAAAGGTGGGGGAAAGACTATTACAGGCTGGAGTCAACTCTTAAGAGCTAGACAGAGGAGATGGGGTCTGTGGGGACGGCAGTGGCTGGGTTTCCTGCTCAAAGGGGGACACTGGGCAACTGGCCCTGTAGGTCCTTTCCACCTTGTCAGTTCATGTCTCTGAATCTGGTTTGGCTGTGGTAGTGAGGGGCAGAGGAGGTGACGGTGACTCCAGTGGGGAGCTGGTATCCATCTGGAAAAGTGGGCTTGTATTTTGGGGAACTCTGAGTTTTGGTGCACAAAAGTAGTCACCCGCTTTTGCCGGTGATACTTGTCCCTCATGGTTAGGTGATACTTGTCCCTCATGGTTATGATCTGCTTACCTATCTGTCACCCTGATCCCCAAGCATCCCTAGCATCCCACACAGTGCCTGTTGGAACTTAATAAATAAT TCONS_00085783 r 5' 82068 TCONS_00085783 r 5' 82068 EMBV3_30009 GGATGGGATATTAGCAAATACTTGTATGATACACTAAGCTATTACAGTGGTACTTAAAAT Gene GeneID:504761|LOC504761:XM_002697785:361_cdna Constitutive 2 NULL GeneID:504761 24 GENE LOC504761 NULL similar to LisH domain and HEAT repeat-containing protein KIAA1468 EMBV3_42314 AGTGAAAAGAGCCTTAGAGATAGCCCAGAATAACGTGGAAGTGGCCCGTAGCATCCTTCG Gene GeneID:525906|CBLB:XM_002684764:261_cdna Constitutive 0 NULL GeneID:525906 1 GENE CBLB NULL Cas-Br-M (murine) ecotropic retroviral transforming sequence b EMBV3_05754 CTGTCATAAAGAAGCTGGAGATGACCAAGTTCCATCCCACTCACCTGACGATGCCTCGCA Gene GeneID:281035|SERPING1:NM_174821:4_cdna Constitutive 1 NULL GeneID:281035 15 GENE SERPING1 C1NH serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 EMBV3_05688 GTGGCAGGGGGAGGGGCATTGCCTTTTGGGTTGAGGATATAAAGGAGGCTTTACAAAGAA Gene BVT0102_323810 + 0 NULL GK000019.2:39956917-39961384 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30612 AGGCATCCCCTACGGCTGTCATGGCTTCCGTGTTACCCGGGGATCTGGAGACGCCCCTGT Gene BVT0102_231142 + 0 NULL GK000012.2:90196589-90201443 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03912 TCTTGTTTGGGTGTAGGGAGGGGCCTTTGTGCCCTTTGGACATAAGTATAGTCAGTGCAC Gene GeneID:539764|RAB5A:NM_001076186:7_cdna Constitutive 0 NULL GeneID:539764 1 GENE RAB5A MGC139803 RAB5A, member RAS oncogene family EMBV3_37185 CTCCCTCTTCATCCCTCCCAAAATCTGGAATACTTATTCTATTGAGCTATTACACCAGTT Gene GeneID:513993|CSDE1:NM_001098025:50_cdna Constitutive 2 NULL GeneID:513993 3 GENE CSDE1 MGC139021 cold shock domain containing E1, RNA-binding EMBV3_19825 GACCCTGGCTCTATAAAACAACACAACGGCACACACAAAACCTCCCAAAGCTAATTGTGC Gene BVV0101_007567 + 1 EMBV3_33078 GK000011.2:72102942-72149848 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43503 GGGAAGCCTGTTCGTGAAGTGGCTGCCAAGGTGGTGATAAAGTGCTGCTGCACTTTGTCC Variant GeneID:617001|C16H1orf93:NM_001040598:219_cdna 473^548 1 EMBV3_25173 GeneID:617001 16 GENE C16H1orf93 C1orf93 MGC26818 chromosome 1 open reading frame 93 ortholog EMBV3_19848 AACGTATCCCAAAGCAGAAAGTCAGCGCCCAGCACCGGTTGTCGATAAGTGATCTTCCCA Gene BVT0102_075490 - 1 EMBV3_37418 GK000013.2:46703757-46779270 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26060 GATGCTGCTTCCTCCTGCCCACTATGAGACCCTCCGATACCTGATGATCCACCTCAAGAA Gene GeneID:507285|CHN2:NM_001045963:16_cdna UTR3_Alt 2 NULL GeneID:507285 4 GENE CHN2 MGC137510 chimerin (chimaerin) 2 EMBV3_08611 GAAGTCATCACCTTACTGTTGCACTTCCAGATTGTGTTCTGGAGTCATTGTGAATGAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03730 TCCCAATGCCCACGTAAGCTGGAGTGACTGCCTGGGCTATCAGCAAGACCATCTGAAATT Gene BVT0102_201052 + 1 EMBV3_10658 GK000005.2:43445672-43570195 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10147 GCAGCTACAGAAGACAAAAGCCAACAACAGCACAAACATAAACCATCCTTGCTACAGCCT Variant GeneID:281078|CLTA:NM_174022:8_cdna 573^626 7 EMBV3_27972 GeneID:281078 8 GENE CLTA CLTA2 MGC140767 clathrin, light chain (Lca) EMBV3_26969 GAGGCTTCATTGGTCACTTCCAGAAGCTCTCTCCTCACCCCTCAACTAGAAGCTCAATCC Gene BVT0102_080387 + 0 NULL GK000018.2:49033662-49046592 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086545 TCONS_00086544 TCONS_00086546 1 XLOC_052170 Coding TCONS_00086546 XLOC_052170 Coding Coding LOC529686 18:49043621-49052310 j TSS64371 3896 1 TCONS_00086546_3 291 0.107032854209446 6 0.552255985267035 0 1.12263205434074e-300 0 0 0 0 1.16282358615618e-21 2.76536129907087e-06 7.57700917941731e-11 0.0139012612430187 0.00762961674871045 0.00521797791838412 0.000752405320639329 0.00344969394695899 0.0010109179669755 0.00201436010155003 0.00500048395537339 0.0138032102625757 2.49128672468527e-23 0 0 0.00195298377380054 0.00774130738056402 0.005280467396791 0 0 0 0.00475403657874628 0.00274084804767984 0.00829792408041593 XM_608140.6 LOC529686 PREDICTED: Bos taurus F-box protein 27-like (LOC529686), mRNA. 0.0 2632 100.00 0.374229979466119 NM_178820.3 FBXO27 Homo sapiens F-box protein 27 (FBXO27), mRNA. 3e-110 405 69.43 0.268223819301848 TCONS_00086546_3 sp|Q8NI29|FBX27_HUMAN FBX27_HUMAN F-box only protein 27; 8e-67 214 50.70 0.938144329896907 3 coding 0 0 0 1 0.000569883405905722 0.996931240105256 -0.0356418113241252 0.459213871718721 GAGCAGGTGAGGCAAGGTGAAGGCCCACTCGTGAGGAGCACTGGCTGAGATGCAGGCAGCCACAGCCGCAGGGCCTGGCGAGGAGACCACGGGGGCCTCAGCCTCCCAGGGCCGGCCCGCCTGTGTTCCCGCTTCCGACCCCGAACCCAAGGAGGCGCCCGGCTTAAGCCAACTACCCATCGAGATGCTCCTGGAAGTGCTGAGCTACCTGCCCACAAGCGTGCTGCTCGGGCAATGCCGCCACGTGTGCTGGTACTGGCGCTACCTGGTGGACACCCGGGCCGTGTGGCTGAGCATCTTACCCTACAGCCATGCTAAGCTGTGGCCCGTCTTCCGAACCTGCCTGCCCCCAGACAACGACGACGACCCCAGGCCCTGCCTCCTGGGCCGCTTCTGCGAGCGCAGACCCTTAGGACGCAATCTCTACCCGAACCGCCATGGCATAGATGCCTTCCTGCCTTGGAGGACAATCAACTGTACAAGCTGGAGACAGGAGGAAAGCTGGGAGGAAGACCGCAGGCTAGTTCCCGAGGACCCTTTCCAGCCTTTCTACAGGTGGTGCTACAAGAAGCAAGTGTTAGACCTGGAAAAGGAGGGTCTGTGGCCGGAACTCCTGGATAGTGGAAAGATTGAGATTTGTATCTCTGCCTGGTGGGCAGACCAAGAAGCCTCAGTCTGTCTGTATGAGCTAATTGTCCAACTTCTAGATGCCAAGCAGGCCAGGCTACATCATTTGTCTCCTAGGCCAATCCATCAAGGTACAACCAGTATCCCTTTTAAGACCAACCACGTGTTCTCCAACCTCAAGAAGGGTGTCCGCTTTGTGTCTCTGGAACACTGGATTTGGGACATGGGGTTCCTGCCTGAGGACTATGGAATCATCGTGCCCAAGGCCAGTGTGATTGTACGGGTCTGTCAACCCTAGTAGAGGACTGTCCTTGTTAAACAACCTGACCATGCCTTCCAGCACCATTGGCTGGGCCACCTCAATAATCAAGGGCTTGTAGTTCCTGCCATCCTGGGATCTCCTGGGTCCAATCAAGGGTTCTACTGGGCCCTGTCTTTCAATTCTATGAGAAGCTATGAGAAGAACGTTTTTGCATCAGGTCCCCTGGCTGCTGCGGCTCTAACACAGCCCCTGTTCTACAGAGTGGAGACACACGGGTGAACACAGGGAGATGGTGAGAGGGCTCCTCACCCTCCCCCCACATGCCAGGCCCCTCTGGTTCTGCCCCTGTACCCTCTGCCCTTCTGTTCCTGCTGCAGAGGCTTCATTGGTCACTTCCAGAAGCTCTCTCCTCACCCCTCAACTAGAAGCTCAATCCCTGTGGCTGAGTAATTCCAGCCTCTAAACTATGATTTCAAACCTGGGGCCAAGACTCAAGAGCTGAAAGTAAAGCTCAAAAAATGTTTGGAGGCAGAGGGTTCTGCCCACCCTGTGAGCAATGAATTGGTCCCCTATATACAACTGCTCTGAGTTGTATAGTGTATAAAATTATTTTGTTACTTTGAAATTCTTTTTAAATATGGAGAGAGTAAATCAGGAAGATATCTGTCGATCATAGGTAATAAAATCTTGCCAAAGCTGAATAGAAATACAGTGTTAACAGCTTGATGACTACTCAGTTCAGAGTAAGGTGTTGTTTCAGTTGAGAGAAAACTGTATAGAAGAAAACAACTGTAGAAGGCATTCTCCAGCCAAGAGAATGGAAGAGTCCGAACCTGATTTCCCAAGCTCTAAGGAACTCATGGGATTAGAGATGATCAGTCAGGGTTAGAAGTTTAGGCAAGTGGTGGACGTGGGCACAGTGTCACAGTGACACCACATTTGTGACATTCTGGTCATGAGAGTGAGAGAGAACCTTGCAACGGCAGGATCCGGCTGTCCCCACCCCAGTCCAGGGACCATGGCTGCCCCCTCCCTGCTGCAGGATCCCTGAGGAGCTCCAGGTCTCAGGATGGAAAGCAGATGAAGCCGCTGCTGCCCTTGATGTGTCCACCCGGAAGTGTCCCCCCACCTGCAGTAGACGATGGGACACACCCCGAGGGGGAGGGTGTTTCATCACTTTCATCCAAAGGGAAGGGTGACAGGTTGAAACTGACCTGAGAGTCGTGTAGTGTGTGGTTCTGGAGTAGATATACTGATCTGGACAGTGAAGCTCTGGAGGATATTTTTGGGTCAGTTAGAGGACTTGGGATAGAAGGAATATGAAACAAGCATTTACAGGAAGGGAAAGGTGGACACCATTGCCTGAAAAAAGAACCATATGATTTAATTTGGATGTATGTATACTGCAGTCTGGCGTGCTGCAGTCCATTGGGTCACAAAAAGTTGGACATGACTTTGGGACTGAACAACAATAAATACTTCTGTCTACACTGTGCATATATGCATTTATATACAAGTATTTGTTTATACACCACATTAAAATAGAATACGTATATATCCTTGTATTCTTGATTGCCTTCTGGATATATACAGAACTAAAGCGTTGCAGGGTTATTGCAATGGTGATAGGTGCATAGTTGTGATTTTTGTAGTTATTGATTTTGCTTATCTAAATTTCTCATTTTCTACATGCTTATGTGTAGAAATACAGTGTTATACACAAATAAGTATTCTCCAATGCAATTTCCCTTTCCATAAATAACCACATTTAGAAATCGTCTTTGCTGACAAAATTGTTTTGTGTGTGTGTGTGATTCTAATTCTTTTTTTTCCCCCAAAACTTTAAACTTTTTATTTTGTTTTGGGGTGTAGCTAATTTACAATGCTGTGTTCGTTTCAGATAAACAGCGAAGGGACTCAGCCATACATATACACGTATCCATTCTCCCAATTCTAACTGTTTGTAATAGTGATGGCCCTTAGTGTGCTGAAGAGGACTCTGAGGTTCTCAGTGTTCTCATCTATTTGCACACATGAAGTATAGTCCACGATGGCTACCCATCCTCCGTGGCCATTCTCACCTCCAGCATTCACTTGGGTCATGGTCATGTTAAAAGTGGCACACCATTAACCAGGATGTGGTGGTAAGGAGCCATAGCTTCTAAAATGCCACTTGGCCGGCTTGAAAGCTCTCATTTCTCAGTAGAGTTCTAACCATTTGTGAAACATGGTTCACCCTGAAATTGCCTTTGGAAAATTTTCACCGCAGAAATAGTTGCCAGTGTTTTATTTTCTACAGTTTCTGTCTGTCCCTCCTGTATGGTCATTACTGTGCATGCCAAAGTATCTTTCCATGTAAGTGTGTTTAATTTTGTCCTTATATATTGCTTACTTCTCTTGGGCTGGGACTTTATCTTCCCAGGGACCAAGTAGCCCAAAGTCACTGCTTTTTTAATGATGATCATGATTAGCTGTTGGATTATTCTATAAAATTGAATTTTTCTCCTAGAAGTCATTGGAATCTTATATTATTCTTAAATATATGATTATTCTTTTGTGTGTATTGTTTAGATTTATTTAAGACAAACTAACAAAGAATTTTAAAAACTATATACGTGTGTGTGTGGCTGACTCACTTTGCTGTACAGTAGACATTGACACAAGAGGCTCCCTGTCCATGGGGCATTTTCAGGCAAGAATGCTGGAGTGGGTTGCCATTTCCTCCTCCAGGAGATCTTCCTGACCCAGAGTTTGAACCCGTGTCTGTTGCATCTTCTTCATCATCAGGTGGATTCTTTACCATTGCACCACCAGGGAAGCCCAAAAATTAACTCTACTTCAATAAAAAAAAGACTAATGATAACAATAAACAATTTGAAATAAATAGAACATACATAAACTAAAGGAAACTGAAGTCACTCAGTCGTGTCCGACTCTTTGCAACCCCGTGGACTGTAGCCTACCAGGCTCCTCCATCCATGGGATTCTCCAGGCAAGAATACTGGAG EMBV3_25238 ACCAACATCAACTTCAGTTTACAGGGGAAGGACTGTCCAAACAACCGGGCCCAGAAGCTT Gene GeneID:535917|CA10:NM_001079609:2_cdna UTR3_Alt 2 NULL GeneID:535917 19 GENE CA10 NULL carbonic anhydrase X EMBV3_01525 GGTACCAGGACCTAGACAAGATTGACCAAAAGGATTTGATGCACAAGGTGAAGACTGAGC Gene GeneID:514598|PCYOX1L:NM_001075673:55_cdna Constitutive 0 NULL GeneID:514598 7 GENE PCYOX1L MGC140668 prenylcysteine oxidase 1 like EMBV3_40243 AGATCCTGGGGCCCCGGTTAGAGAAGGTGGTGGCCCCTCCCGCCTCCTTCCTCTGTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34873 TTGCCAAAAGCATCCATGAAAGACAAGCAGGCCCAAGAGGGCAGTGGTCCAAACTACAGC Gene GeneID:516670|EIF2B1:NM_001075743:174_cdna Constitutive 0 NULL GeneID:516670 17 GENE EIF2B1 MGC143314 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa EMBV3_12691 TTGCCAAAAGATGGAAGGTGTTCTGTCCCCTGTCTGTGGAATGACGTTTAGGTGGCAGCA Gene BVV0102_122075 + 0 NULL GK000028.2:3160999-3187635 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134643 TCONS_00134642 1 XLOC_081473 Coding TCONS_00134643 XLOC_081473 Coding Coding TUBB2B 23:28100211-28105333 = TSS100318 3206 1 TCONS_00134643_6 444 0.0143480973175296 4 0.374731497754345 0.000768344092431372 1.65782701226661e-06 0.000287991537384555 0.000236098009203729 0.000347336214671155 0.000203894244630885 0.000173715493866933 8.5785340271346e-06 0.000691513571862432 0.00105089588326756 0.00488624051055608 0.000767689987826613 0.000693508053392895 2.3952555375168e-09 0.000296151757223523 0.0554221018302842 0.0101997291592272 0.0526122369096293 0.000476178051767015 0.00157045087236432 0.000201169117617498 0.00993617220671885 0.012151269744306 0.0285897955367536 0.00090525461657767 0.0006447151647248 0.000155648450930737 0.00385597842922696 0.00224568383191221 0.00274076230089066 XM_005223680.1 TUBB PREDICTED: Bos taurus tubulin, beta class I (TUBB), transcript 0.0 4525 98.95 0.791640673736744 NM_178014.2 TUBB Homo sapiens tubulin, beta class I (TUBB), mRNA. 0.0 2444 81.67 0.778852152214598 TCONS_00134643_6 sp|Q2KJD0|TBB5_BOVIN TBB5_BOVIN Tubulin beta-5 chain; 0.0 934 100.00 0.997747747747748 3 coding 0 0 0 0 -1.04532737067894 0.0106555315199885 -0.020595433741338 0.785473743868738 CCTCTCCTTTCTCCCTCTCAGAACCTTCCTGCCGCCGCGTTCGGACCTCGCTGCTTCAGCCTCCGGGTCCCGTTCCATCTTTCCACCCTGCGACTAGCAGCAGAGAAAAACTAATTCCATAATATTTTTTTGCCCCGTATACACTTTGAGGCGAGCAAAAAGATTAGAATAAATTTTAACAATGAGGGAAATCGTGCACATCCAGGCCGGTCAGTGTGGCAATCAGATCGGTGCCAAGTTCTGGGAGGTGATCAGTGATGAACATGGCATCGACCCCACCGGCACCTATCATGGGGACAGCGACCTACAACTGGACCGCATCTCCGTGTACTACAATGAAGCCACAGGTGGCAAATATGTCCCTCGTGCTATCTTGGTGGATCTAGAACCCGGAACCATGGACTCTGTTCGCTCAGGTCCTTTTGGTCAGATCTTCAGACCAGACAACTTTGTTTTTGGTCAGTCCGGGGCAGGCAACAACTGGGCCAAGGGCCACTATACAGAGGGAGCCGAGCTGGTTGACTCGGTCCTGGATGTGGTTCGGAAGGAGGCCGAGAGCTGTGACTGCCTGCAGGGCTTCCAGCTGACCCACTCGCTGGGTGGGGGCACTGGCTCCGGAATGGGCACCTTGCTCATCAGCAAGATCCGTGAAGAGTATCCCGACCGCATCATGAACACCTTCAGCGTGGTGCCCTCACCCAAAGTTTCCGACACTGTGGTTGAGCCCTACAACGCCACCCTCTCTGTCCATCAGCTGGTGGAGAACACTGATGAAACCTACTGCATTGACAACGAGGCCCTTTACGACATATGTTTCCGCACCCTCAAGCTGACCACACCAACCTATGGAGACCTGAACCACCTCGTCTCGGCCACCATGAGTGGAGTCACCACTTGCCTCCGCTTTCCTGGCCAGCTCAATGCTGACCTCCGCAAGCTGGCCGTCAACATGGTGCCCTTCCCACGCCTCCACTTCTTCATGCCTGGCTTTGCCCCTCTTACCAGCCGTGGCAGCCAGCAGTATCGGGCCCTCACTGTCCCTGAGCTCACCCAGCAGGTCTTCGATGCCAAGAACATGATGGCTGCCTGTGACCCCCGCCATGGCCGGTACCTCACCGTGGCTGCTGTGTTCCGTGGGCGGATGTCCATGAAGGAGGTAGATGAGCAGATGCTCAACGTGCAGAATAAGAACAGCAGCTACTTCGTGGAATGGATCCCCAACAACGTCAAGACAGCTGTTTGCGACATCCCACCCCGTGGTCTGAAGATGGCAGTCACCTTCATTGGCAACAGCACAGCCATCCAGGAGCTGTTCAAGCGCATCTCGGAGCAGTTCACGGCCATGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGGTGAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAACGACCTCGTCTCCGAGTACCAGCAGTACCAGGATGCCACCGCAGAAGAGGAAGAGGATTTCGGTGAGGAGGCCGAAGAGGAGGCCTAAGGCCAAGTCCCTATCACCTTAGGCTTCTTAATCCCCTCAGCCTTCTTCCTCAACGACCCCTTTCCTCTCCCTCAGAATTTGCATTTTCTGCATCTATCTTGTTTTTCTTTTTTGGGGGGGATTCTAGAACAGTGCCTGGCACATAATAGGCGCTCAATAAATATTTGTTGTTTGTTGAATGTCTCTTCTCTCTTTCCACTTTTGGGGAGCCTAGATTTTCTGCATTCTGGGTAACCCTGTCAATTTTCTTTCTGGTGCTCACTCCTCCCATCTGTCCAGTTAACATTTCCCTCTCTGTTTTCGAGATAGCTCTCCAAGAGGCTGGGGTTCCTCAAATCTCATTTAGAACCGTGTGCTGAAAACCTGGATTGGTGACTGCCATCCTAGGCCGATGTGCTGGCCCAGGGGAAGGAAACTGAGCGAGTAGAAGTCCCTACCAGAAAGGGTTGGGTTTGGAGAGGGGCATCCAGGGTACTGAAGTCCTAGGTGCCAGGTATCTCCCCGCTCCTCTCAGCTTGTGCAGAGGTGTTGACAGTATTATCTTCATTTTCAGTCTCCTTCCAAGTTCTGTCCTAAGCTATTACCTTTGCAAGTTTCTGGCCCCCACCCTATCAAGTGGGAATCCCTTCCTCTTCCACTTTATCTCCTTCATAATAACGTTGAATTCCCTCCTTTCTCCTGTTTGAGAAAGGGGGTCAAGAGAAGCAAGAGATAGCCTTGGTCTCTTAAGTCTCCAGAAAGCCCCTCCCCACCCCATCTTATCAAAAAAAAATGATACGTATCAACCCCTTCTGTACTTATATGGAAAGGTATGTGCTGCCACCTAAACGTCATTCCCCAGACAGGGGACAGAACACCTTCCATCTTTTGGCAAACATCTCATCTCTCCTGCTACTGCTTCCCCACTTCTTGATTTTTGTCCTATTCTACACTTCAGATTTCTATTGTGTTGAACTTGCTGCTTTTTTTCATATTGAAAAGATGACATTGCCCCAAGAGCCAAAAATAAATGGGAACTGAAAAGAATCTCGCAGCACGTGTGCTCATTCAGGGAAAGATCACTGGTGAAGGAGGCATGGGGCTCCAGGTCAGTTGTACAATATACTCTGCTCTCTATAAACAGGTGAGAATATCCTTACACCTTAATCCCTGGTACCCTGTCTTAGTAACTGGGATAGATGCTCAGATGTGAGGAGATCTAGGGATAGAAAGGAGAAATGAGGTGAATGTCATATAAGTGGTTGCCAGATAAGCATCCCCTTGAACTTGGAGAAATAGAGATTCTCCCACCTGCCCAGATGTACTGAACCAAAAGTGGGTTGGACCCCAGCAGTCTGTTTTTAACAGTGCTCCAGAAGAATCTTGGGAGATGCACAGACACTGTTTACCACTTGGAACACACAGTACCTCCTGGGTTCCTTTCAGTTATGGATATATGGGTTTTCTCAGCCTAAGGCAAAAATCACCTGGGGAGGGGTGGTGTCATATCATAGTCCCATTCTAAACTGACACTAGTGTTCCACCTAATAACTCCTGCTACAAAGAGCACAGTGTTAAGTCTCAAATATCCCTTTATTATCAGTAATTCTAGGGACTAACATAATTACTGATACTGCTGCTACTTAAGGATGCTCTTCTGACTATAATGAATTTCAGGGTAGAGTGGGGGTATTCTACAACTCTTAACAGT EMBV3_03700 ATGTCCTGCAACCCCGATCCTCCCAGGCTGCAGCAATTTGGAGTCAAAAGAAAGCAGAGA Gene GeneID:614376|LOC614376:XM_002686530:734_cdna Constitutive 0 NULL GeneID:614376 3 GENE LOC614376 NULL similar to histone cluster 1, H2bd EMBV3_32344 GACTACTCATCATGGGATTCTTGGTCCTAGGATTGGTCCCCTTCTTGCTGATGTGCTGTG Gene GeneID:281131|DSG1:NM_174045:61_cdna UTR3_Alt 2 NULL GeneID:281131 24 GENE DSG1 NULL desmoglein 1 EMBV3_27536 AAAAGCACCTGGCGAATCCCTATGGCAGCTGGAGAATGCATGGCAAGATTGTTCCCCCAT Gene GeneID:511479|MRPL45:NM_001035100:94_cdna Constitutive 2 NULL GeneID:511479 19 GENE MRPL45 MGC127097 mitochondrial ribosomal protein L45 EMBV3_39888 CTGGTGCTCAAGACACAGAAGCTAAAGGAACAGATGAGGAGACAGAGAGAGCCTGGGAGA Gene GeneID:617505|MCCD1:XM_002697348:311_cdna Constitutive 0 NULL GeneID:617505 23 GENE MCCD1 NULL mitochondrial coiled-coil domain 1 EMBV3_15319 AATTTCAGTCAGGCAGCACAAGGCTGGCTCCCAGTTGTTATTTCAGAGGAGGATGCTACC Gene GeneID:613679|AGPS:XM_002685277:113_cdna Constitutive 0 NULL GeneID:613679 2 GENE AGPS NULL alkylglycerone phosphate synthase EMBV3_36534 TCTACAGGCAGAGTCTGGGCAAGGTGTCCTTTTAATCTAGAAGATGGCCTTTGTTGCGGC Gene BVV0102_404882 - 1 EMBV3_32753 GK000007.2:19622976-19640260 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215882 TCONS_00215884 TCONS_00215885 TCONS_00215886 TCONS_00215883 TCONS_00215887 1 XLOC_131109 NonCoding TCONS_00215886 XLOC_131109 NonCoding NonCoding LOC100848538 7:19618649-19640157 = TSS161141 1129 2 TCONS_00215886_2 54 0.202834366696191 4 0.947691449295578 0.00015770432268724 0.000289862470371324 0.000159590727802055 3.92540378470487e-05 0.000415440288088396 9.83182396509192e-05 1.19933600206146e-117 4.9848170037817e-30 0.000327993875933305 1.22509647828364e-07 0.00102469893001785 7.07566274491516e-26 0.000383356329438321 0.000163975260400246 6.18257548811311e-05 0.000389431868391207 1.445413646364e-12 0.000134810925791697 0.000355150095279485 0.000438980855302126 2.85998330714627e-17 5.17803907946635e-09 0.000455976249675584 1.12982259809633e-07 7.31176070642058e-115 2.99378361027523e-51 2.73606478706904e-05 0.000170281297081413 3.21152739595607e-05 7.97243545592954e-43 XR_138745.2 LOC100848538 PREDICTED: Bos taurus uncharacterized LOC100848538 (LOC100848538), 0.0 1166 100.00 0.571302037201063 NR_102302.1 ZNF678 Homo sapiens zinc finger protein 678 (ZNF678), transcript variant 4e-38 163 75.10 0.20903454384411 0 noncoding 1 1 1 1 0.0266977400458092 0.867217097287455 0.00298696189260281 0.967801305666932 GCGGGCAGCTAGCGCCTGCGCGCGGAGCCCGGCACTGAGACGCGCTCTGGATCGCAGTCCGGTTCAGGACAAGCTCGTAGCACGCGCCTGCGCATTAACCGCCCCCGCCTCCTTTTCCCGCCGACCGAGGGGGCGTGGGCAGGGCAGGGCAGGGCGCACGCGCAGTGAGCCTGGAGGGCGCGGCGGGCAACCCGGGATACGAAGTTCTTTACAGCTGCCCGGCCGGAGTGGGTTTTCATGCCCCTGCTTTCCGATTGTTTTCCGGCCCTAACCCCGAGGCTGGAGCGTGGACAGCGGAGGGCGCCGCAACAAAGGCCATCTTCTAGATTAAAAGGACACCTTGCCCAGACTCTGCCTGTAGAATTCATCACTTCCAGCCGGGTGACTTGGGGTTAATCAAAACCTGGAAAGAAGACAAACTCCAACCAAGCTGGAAAGGCCCTTATCAAGTGCTTCTGACGACCGAGACAGCTGTGTGGACTGCTGAAAAAGGTTGTACTCATTATACACGAGTCAGGGGGCCAATAAAAGAGACCTCAAAGGGAAGGGAAAGGACCAATGAACAGCCTTTAAAGGGTCTTTTCCAATGAGCTGGCTCTTCACATCAGATGGCCAAAGTATTGGAGCTTCAGCTTCAGTCCTTCCAAGAAACCTAAAGGGATAATGTGGTGCCCAACCACACAGTCTGGACTACACACACATCTGCCAGTGGCCCCCAACACCCAGATGCGCCATCTCAGAACCCAGCTACCCTTGGTGATGTCTAACTGCTGTGACAGCGAGAAAAGAAGCAGGAAGGGACAAGACGGGAGGGGACCCACAACGTGAATACCACCCGTGACAGTACTGGAACTCAGGGGGCGTCACCCTGGGGTCCAAGCATCCACAACCCGATCAGATCAGTCAGTGCGTGCCAGCCGCAGCCATCAAATCCTCTCCTTCGGTGTGAACACCTCTCCCCTTGCTCCCGGCTGGGGAGGCCCCTCACCACCTTGGCTTTGGCGCTGCTTGGTTCAAAGCGATGTTTGCTCAGAGAATCTTTTGAAAAGTTAACAAGCCTCAGTTTGTCTTTTAACAGGTTGAAACTGTTGTTACTTGCGAGTCAGTAAAGACAACTGACAACAAATCA EMBV3_10991 CCCATCGATTTCACCTAACCTTGCCAGTAGAGGGATGACGAGGGATATGAGACTAGGTAT Gene GeneID:408021|OASL:NM_001081659:45_cdna Constitutive 0 NULL GeneID:408021 17 GENE OASL NULL 2'-5'-oligoadenylate synthetase-like EMBV3_31625 CTGGAGGTTCCTGGGGATCACTAGTTTTTTAATTCAGAAGAAGCAGAACACATCAGCAGG Gene GeneID:505727|NOV:NM_001102382:13_cdna Constitutive 0 NULL GeneID:505727 14 GENE NOV MGC137857 NovH nephroblastoma overexpressed EMBV3_12628 GTCCGGCAGGTGCTGGCTGTGGGTCAGGACTTCCCTTTGGAACCCATGGAGGAGAATAAA Gene GeneID:538733|ALKBH1:NM_001102220:120_cdna Constitutive 2 NULL GeneID:538733 10 GENE ALKBH1 MGC165976 alkB, alkylation repair homolog 1 (E. coli) EMBV3_13642 TTTTGTCAACTACCCCCGTGGGAAAGAAGCTCACTGGCCAAGATATCCCCCTCTGTGGAT Gene GeneID:516043|APOBEC1:XM_002687817:111_cdna Constitutive 0 NULL GeneID:516043 5 GENE APOBEC1 NULL apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 EMBV3_17076 TCCAAGTTCAACGCTGAATATGGTCGCTTGTCAACAAGTGTCGAGGGCGTGTTAGCTGCA Control NULL NULL 0 EMBV3_36005 NULL NULL NULL NULL NULL NULL EMBV3_41693 ATTTCAAGCTCAGGATGTCCAGAAGCAAGTGTAAAAGCAGGGGTCATACGGTTGTTGAAG Gene GeneID:540378|MDM2:NM_001099107:43_cdna Constitutive 0 NULL GeneID:540378 5 GENE MDM2 MGC148543 Mdm2 p53 binding protein homolog (mouse) EMBV3_13799 CCCAGAGGCCAAGCTGACGCCAGAGGTCCAGGGACACCTTCTTAGTTCTTGGTATTTATT Gene GeneID:505605|LRRC8A:NM_001076807:31_cdna Constitutive 0 NULL GeneID:505605 11 GENE LRRC8A LLRC8A MGC139701 leucine rich repeat containing 8 family, member A EMBV3_04072 TCACTGAAACCACAAAGTCCTGCTTACAACTCTGCATAACCCAACCCAGAGGTTTGAAGC Gene GeneID:614834|CDS2:NM_001078046:41_cdna Constitutive 2 NULL GeneID:614834 13 GENE CDS2 MGC142734 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 EMBV3_38399 CCGCCACCTCTTCCATCCGGACTTGCTCCAGTGCAGCCGGGAACTTCCTGTGCCCGGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05477 AACCTCTATGTGGTTCTGTCCCTCTGTGTCACCTACGGGGTCTTGTTTTCCACTCTGTGC Gene GeneID:513008|SLC45A1:XM_002694050:139_cdna Constitutive 0 NULL GeneID:513008 16 GENE SLC45A1 NULL solute carrier family 45, member 1 EMBV3_09190 GGTAGCTTTCTACTTGAGGGATTGGGTACTCAGCAGATGTAAGCTCACTGGAACCCTGTG Gene GeneID:524284|AMIGO1:NM_001101119:125_cdna UTR3_Alt 1 NULL GeneID:524284 3 GENE AMIGO1 NULL adhesion molecule with Ig-like domain 1 EMBV3_19402 AAGTCCAGGGCTGACAAGGCTTTGGCCAGTCATCGCCCACCTGATGTCTCCAGGGAGCTT Gene GeneID:521224|RASA4:XR_084076:732_cdna Constitutive 0 NULL GeneID:521224 25 PSEUDO RASA4 NULL RAS p21 protein activator 4 EMBV3_39986 AATGTGTCAATTACCAGTGGGTGAAGTTTGATGTGTGCAAACCTGGAGACAGCCCCCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21940 TCTTCACCTACGCCCTCCAGTTCTACGTCCCTGCCGAGATCATCATCCCCTTCTTTGTGG Gene GeneID:518759|SLC36A1:XM_002689313:15_cdna Constitutive 0 NULL GeneID:518759 7 GENE SLC36A1 NULL solute carrier family 36 (proton/amino acid symporter), member 1 EMBV3_12342 GCAGTACCCGGTGCCCGACTTTGAACTGGTTGCTGCTTCCTCTTTTTGTGATTGTCATGG Gene GeneID:506381|SELI:NM_001075257:66_cdna Constitutive 0 NULL GeneID:506381 11 GENE SELI MGC139836 SELI hEPT1 selenoprotein I EMBV3_06603 GTCTAATAGGAACCTACTGCGGACACAGGGACCTCTCCTCAATCCTCTGTACTATTACGG Gene BVV0101_021857 + 0 NULL GK000001.2:148908171-150025826 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005652 TCONS_00005651 1 XLOC_001332 Coding TCONS_00005651 XLOC_001332 Coding Coding SETD4 1:150023408-150048604 j TSS2803 2118 1 TCONS_00005651_4 314 0.0439093484419263 12 0.916411986505259 0.000293056689092901 6.77102253443041e-14 5.04354123215513e-05 3.02237796919853e-13 3.82299880708982e-09 1.03561399088034e-13 0 0 2.18603622817205e-271 1.54200810809301e-12 6.72468812093912e-05 4.14041038657735e-05 3.86891083591068e-05 2.86817029411413e-33 1.48604891791399e-05 4.87709175510438e-08 0.000730651622927799 0.0036307319123338 3.04702020145546e-05 4.75342056244285e-05 4.29942241244043e-06 0.0010818047940456 1.20947503948585e-09 0.000265434148458364 3.09504974907387e-14 9.39409045512843e-05 0.000150655272599964 4.83702491142694e-09 0.000107359425047391 0.000348202072354662 XM_005202091.1 SETD4 PREDICTED: Bos taurus SET domain containing 4 (SETD4), transcript 0.0 1700 98.96 0.45042492917847 XM_005260999.1 SETD4 PREDICTED: Homo sapiens SET domain containing 4 (SETD4), transcript 0.0 673 82.70 0.303116147308782 TCONS_00005651_4 sp|Q9NVD3|SETD4_HUMAN SETD4_HUMAN SET domain-containing protein 4; 6e-101 308 79.70 0.624203821656051 1 noncoding 0 0 0 0 0.0445433267648703 0.709676957615899 0.00623947322692442 0.897468489363101 GCAAGTTCTGGGAGTTGGTGTTGGACAGGGAGGCCTGGCATGCTGCAGTCCACGGGGTTGCAAAAAGTCACACACTACTGAGTGACTGAACTGAATAGTGGGTAGGGCAGCAATTGAACTCCGTCTTCTGTAGGGAGAAGTTACGCTGTTCCTGGGACAGCCAACTGGGCCAGATGATCTGAAGTGCCCTTAAGCTGAAGAGGAACGCGACAGGGCACTCTGGCCCACGGACAGGCTGAGTGAGGGTCGAAGCAAAGTCAGCCCGGAAATGGGGGCTAGCCTGGCCTTGCAAGGCCTCGGCCCCGCCCGGCAAGGCGGAAGTGGGTGGGCCACGGAGAGGGCCCGGTGGCCGCCCTGGCAGACGCACACTTGGCTGCTCCTCCCTTGGAACTACGGAAGGAAAGAAGCTCCAGGTCGGCTTTCAGAGCGTAGACTCCTGGTCCACGGGCCACAAGGTTTCCTTACTCCTGGACCTGCAGTCCAGCCACGGACGACCCTAGCTAGCTCCGTCAGCCGTGCCGTCCCCTTCCATCCCTCCCCCCGGAAGAATGCGCATGTGCAAGCCGGTAGGCGGAGGCCCGCGGCGCCGAGAGCTCAGCCTGGCCACCACGGACTTGGGTCAGTGTGGCCTAGAGGCGGGCCTGGCGGCGCTCGGCTGTCCCCCCTGCTGCTGCGGCCCGCTTCTGTAACTCGCGAGCAACTGGCGTGCTGTTCCGGCTGTTCACGCGCTTCGGGCCCACCCACCGCCATCTTGGAGCTGTATCAAGGTACAAAGAACAGTGATTGTCATACAACTGGAAAGAAAAGCAAAGAAAATGCTTTTTGTTTTAGTTTGGACAATTAAACAAAAACTGCATTTTTAGTATGAAGAACGGAGGAGGAAGAACAAGCCGGATCAGAAGACGAAAACTCTTCACAAGTTCTGAATCAAGAGGAGTGAATGAGAGCTACAAGCCTGAATTTATAGAGCTTAAGAAGTGGCTGAAAGATAGGAGGTTTGAAGATACAACCTTGATACCTGCCCATTTTCCAGGTACAGGAAGAGGACTGATGAGCAAGACGTCCCTGCAGGAGGGACAGACGATTATCTCATTGCCTGAGAGCTGCCTACTCACCACGGACACAGTGATCAGAAGCTACTTAGGGGCGTACATTGCTAAAGCCAGACACCTGCGCACTCGCCCCCTACCTGGATCTGCTGAACCACAGCCCCGACGTCCAGCATTTAATGAGGAAACTCGCTGTTATGAAATTAGAACGGCTACACGCTGTGGCAAACACAAGGAGGTTTTCATCTGCTACGGCCCCCACGATAACCACCGCCTGCTCCTGGAGTACGGATTTGTCTGCGTCAGCAATCCTCACGCTTGTGTTTATGTCTCTAAAGATATACTTGTTAAATATCTTCCATCCACTGCTAAACAGATGAACAAAAAGATATCCATTTTGGAGGATCATGACTTCACAGAGAATCTGACGTTTGGATGGGATGGACCGTCTTGGCGGCTGCTCACAGCTCTTAAGTTGTTATGTCTGGAAGCTGAAGAATTTACGTGCTGGAAAAAAGTACTTCTTGGGGAAATAATTTCTGATACAAATGAGAAGGCAAGTTTGGACGTAGCCCAGAAAATATGCCATTACTTCATAGAGGAGACTCATGCTGTGCTTCGAAAGGTTTCTCGCATGAAGGATGAAGAAGTGGCTTTGATGAACCAATTGACTTTGGTAGAAACACTGCGAACGGAAGAGCTGAAGATTCTCCAGGCCTCTGCCAAGGCCCTGACCACCTTGCAAACAGCTTTTTCGTAACACACTTCACCGAAAAAAATGGACAGTGACGAGAAACAACCACTCAGACATTTGCAAATGAGAACTGTTTCATCATCTGCAACACATCTACCCTTGTTTGAAAAGAAATCAGTAGTCTAATAGGAACCTACTGCGGACACAGGGACCTCTCCTCAATCCTCTGTACTATTACGGGAAAAGAATCTTAAAAAAAAGGATGTATATATGTATGCATGTCTGCATATCACTGGTTTGCTTTGCTGTACAGCAGGAACCAACGTGACGTTGTAAACCAACTCGACTCCAATAAAAATTAATTGAAAAAAACCC EMBV3_21200 GACTACCGAGGTCGTGTATGCATCAGCATGAGGAAGCACGTGTGAAATATGAAAAAGAAG Variant GeneID:526444|CASC1:NM_001046282:37_cdna 57^141 1 EMBV3_10410 GeneID:526444 5 GENE CASC1 MGC137081 cancer susceptibility candidate 1 EMBV3_39048 GGACGTCCGCCGGCGCTTAAGTGATCACTATAATCGAATACCCGCGGCCCCCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_41920 TTCTGGTAACCAATCCAGCGCCTCCATCAGCCCCCCAGACCTCGCCTTCTGGAAACCCTA Gene GeneID:512048|REXO1:XM_002689149:149_cdna Constitutive 0 NULL GeneID:512048 7 GENE REXO1 NULL REX1, RNA exonuclease 1 homolog (S. cerevisiae) EMBV3_15926 ATGAAGCCTTACACAAAACCTGAGACTTTCCTGCTAGCCCCCATGCTGCTCTGCACCCTC Gene GeneID:100337113|LOC100337113:XM_002695079:499_cdna Constitutive 0 NULL GeneID:100337113 18 GENE LOC100337113 NULL hypothetical protein LOC100337113 EMBV3_02132 GCCGGCTTCTCCCTCTTCTTCTACCCCGCGGCCCCAGAGAGCCCCCGGCTCACAGCGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10257 ATTGTTCCAGCCTTGGCTGCCTGCATCCAGCTTGGTCCTGGGCTCTACTCTCCCCCAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26928 CTTCTCTTTCTAACTCAAGGACGCCGGTCCCTATAAGGCGAAGAGACAATAGAGCCACAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08839 CGCACTGGAATCAGGCACTCAAGTTGAAAGGTCAGAACTCATTTTTCACCTGGCTAGTTC Gene GeneID:100336623|LOC100336623:XM_002695418:59_cdna Constitutive 0 NULL GeneID:100336623 18 GENE LOC100336623 NULL NLRP7 protein-like EMBV3_02241 CACTTGGCTATATTGCAAGACATAATGCAGCTTTCTCAGCTGATAGTGAACGCTGGGGGA Variant GeneID:539424|SPAG6:NM_001038185:139_cdna 592^971 1 EMBV3_18185 GeneID:539424 13 GENE SPAG6 MGC133832 sperm associated antigen 6 EMBV3_18639 CTCCTTGCGGTTGGCGGCTTAGGCAGCGCGGTACTTGGGAGAATGGATGAGACCTGTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21655 GGGACTTCCCCAGTGAGTGTTTCTGCTCTCAGCGTCCCCTCTTGTTTTACCTGAAAAGAT Gene BVT0102_126374 + 0 NULL GK000016.2:45006430-45098129 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31023 CAGCTTCATTTGACCACCGGATCTTAAGTCTGTTGACAGTTTTCAGCATGACCGAATCGC Gene BVV0102_290277 + 0 NULL GK000001.2:52841456-53103993 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000603 TCONS_00000612 TCONS_00000609 TCONS_00000610 TCONS_00000604 TCONS_00000605 TCONS_00000606 TCONS_00000608 TCONS_00000607 1 XLOC_000162 Coding TCONS_00000610 XLOC_000162 Coding Coding BBX 1:52629823-52846715 j TSS309 8722 1 TCONS_00000610_6 942 17 0.959864632465155 2.24419893292117e-12 0.000862099176257766 0.000186815368365186 0.000290148514441208 6.47196203883991e-07 0.000264458424259131 9.74002397170384e-05 0.000188422442098731 5.28496429282758e-07 0.000190225247191722 0.000107825717684899 0.00013861106499113 9.18584671716562e-05 7.14190731721808e-05 5.49947295351554e-05 0.00429183246243194 2.92120963833827e-08 0.00219775189630378 0.000334411885937555 3.46071208597947e-07 5.17568367701702e-26 0.00142948133837945 0.000884055016928165 0.00250128763967001 0.000509031555267027 5.91644129428477e-06 1.95279204591724e-05 0.000416790084463266 0.000477399869653143 0.000904986041677759 XM_005201320.1 BBX PREDICTED: Bos taurus bobby sox homolog (Drosophila) (BBX), 0.0 1.562e+04 100.00 0.992891538637927 XM_005247642.1 BBX PREDICTED: Homo sapiens bobby sox homolog (Drosophila) (BBX), 0.0 1.108e+04 88.64 0.994267369869296 TCONS_00000610_6 sp|Q8WY36|BBX_HUMAN BBX_HUMAN HMG box transcription factor BBX; 0.0 1668 93.31 0.998938428874735 3 coding 0 0 0 0 0.191007746672829 0.612530875735926 -0.0347979360119909 0.574378851504095 CTGTGTAATAGTTTACCAGATTGCCAGAGATTCGTAGAGGAAAGAAAAGAATCCTGCTGCATCACAGAAGTTGGAAGTTCTGATGTTCCATTGGCATCACAATGGAAAGTCTTGACTTGACCGGTCACAGTAATGAAAGGCAGTAATAGAAATAAAGATCATTCAGCAGAAGGAGAAGGGACTGGAAAACGACCAAAGCGAAAGTGTCTTCAGTGGCATCCATTGCTAGCAAAGAAACTCCTTGACTTTTCAGAAGAGGAAGAAGAGGAAGACGAAGAGGAGGATATTGATAAGGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACTGAAGATGATGAATCACCAGAACAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAACGTCATCGCTCTCTTGTCCGTCAGGAACACCCCAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTCGATCCAAAGGAAAAGCAGAAATACACAGACATGGCCAAGGAGTATAAAGATGCGTTTATGAAGGCAAATCCTGGCTACAAATGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAGCACCCACCACTGTCAATCCACGAAAGAAACTATGGGCCTTCCCATCTGACTCTTCAAGAGACTTGCCAAGCCCCAAGAAAACAAAGACTGAAGAAATGCCTCAGCTTAACTTTGGAATGGCCGATCCTACTCAAATGGGAGGCCTGAGCATGCTGCTTTTAGCTGGAGAACATGCTCTTGGGACACCAGAGATCTCCTCTGGCACTTGCAGGCCTGATGTTCCAGAATCCTCTGAATTGCGTCAGAAGTCACCATTATTTCAGTTTGCTGAGATATCTTCAAGTACATCCCACCCTGATGCTCCTTCAAAACAGTGTCAAGCATCAGCCTTGTTTCAGTTTGCAGAGATTTCTTCAAACACTTCACACTTGGGTGGTGCTGAACCTGTAAAACGCTGTGGAAAGTCTGCACTCTTTCAACTGGCTGAGATGTGCCTGGCATCAGAGGGGGTGAAGATGGAAGAATCAAAGCTAATAAGAACAAAAGAATTAGATGGTGGAAGAATTAAAGAATTGGAGAAGGGAAAGGAAGAAAGAGACACAAAAATGGAGAAAACGGATGAAGCCAGGTTACAGAAAGAAGCAGAATTTGAAAAATCAGCTAAGGAAAATGTAAGAGATTCTAAGGAAATAAGAAATTTTGAGGAGCTGCGAATGGATGATATAATAGGTATAAAAATGGAAGCTCCCAAAGAAATTAAAAAGGAAGAATTAGAGGAAGATCAAAAATGTGGTCACTTCCCTGATTTTTCCTACTCTGCCAGTAGCAAGATAATAATAAGCGATGTTCCCAGTAGAAAGGACCACATATGCCATCCTCATGGAATCATGATCATCGAGGATCCCACAGCACTAAGCAAACCAGAGAAGCTAAAAAAGAAAAAGAAGAAAAACAAAATGGATCGACACGGAAATGATAAATCCACACCCAAGAAGGCCTGCAAGAAGAGGCAGTCCTCGGAGTCAGATATCGAGAGTGTCATGTACACCATTGAGGCTGTGGCCAAGGGAGACTGGGGCATCGAGAAGCTTGGAGATACCCCTCGCAAGAAGGTCCGCCCATCCTCCAGTGGAAAGGGGAGTATTTTGGATGCCAAGCCACCAAAGAAAAAAGTGAAATCTAGAGAGAAGAAAATGTCAAAGGAGAAATCCTCAGACCCCACCAAAGAGTCAAGACCTCCAGATTTTATCAGCATTTCTGCCAGCAAGAACATTTCTGGTGAGGTGCCAGAGGGTATAAAAGCAGAACCATTGACCCCCACGGAGGATGCGCTACCACCCACCCTGTCAGGACAGGCCAAGCCTGAGGACAGTGACTGTCACAGAAAGATAGAGACTTGTGGCTCCCGGAAATCGGAGAGGTCTTGCAAAGGTGCTCTTTATAAAACCCTGGTGTCTGAGGGCATGCTCACCTCTCTGCGAGCTAATGTTGACAGAGGGAAACGAAGCTCAGGAAAAGGAAACTCGTCTGATCACGAGGGGTGTTGGAATGAAGAAAGCTGGACATTCAGCCAGAGTGGGACCAGTGGAAGCAAGAAGTTCAAGAAGACAAAGCCAAAGGAAGACTCTGTCCTTGGCTCAACAAAGCTGGATGAAGAATTTGAAAAGAAATTCAACAGCCTCCCTCAGTATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCCCAAGGAAAAAGAAAAAGACTGGAAATATGTCCGCAGAACCGACTAAAACCAGCAAAGGTCCTTTCCAGTCTCAGAAAAAGAACTTATTCCACAAAATTGTCAGCAAATATAAGCACAAAAAGGAGAAGCCTAATGTTCCGGAAAAAGGAAGTGGGGATAAATGGTCAAGCAAGCAACTCTTCTTGGATGCCATTCACCCTACAGAAGCCATATTTTCAGAAGACAAAAACACCACAGAGCCTGCTTATAAGGTTAAAAATGCCCTATCCATTCCCAACACTCCAGAGCCAACAACAACTCAAGAACCCTTGGTGGGCAGCCAAAAGAGAAAAGCAAGGAAAACCAAGATCACACACCTTGTCAGGACAGCAGATGGCCGGGTGTCACCAGCAGGAGGCACTTTGGATGACAAACCAAGGGAACAACTGCAGAGGAGTCTCCCTAAGGTGACTGAGACAGGCTGCAGTGATGAATGCTCACACAATAGGGAGGCCGCAGAGACGCGGAGCAGCACCCCAGAGATGCCGGCCGTGTCCGCCTTCTTCAGCCTTGCCGCACTGGCCGAAGTGGCCGCCATGGAGAACGTGCACAGAGGTCAGAGGTCAACTCCACTCACCCATGATGGACAGCCAAAAGAAATGCCACAGGCTCCTGTACTTATTTCCTGCGCTGACCAGTGAAGCGCCCTTTAATTGTAAAACATTGTGCTTTACCTACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCATGTGGTGGAAAATAGACTGCAAACAAGTGCTTGTTGCCCTCCATGGCCCAGATTCACTTGAAGCAGAAGTTGGCACCCTGGGCCAGTTTTGTTCTCTCAGAACCCAGAATCTTTGAGGGTGATGTGATCTGTCTGATACTGAGCAGAAACAGGATGATCTAGAGCTTTGCTTTCTATTGAAGGCTTTTGATGGTAACAGGTGGTAACTTGGTAAAAGGCTGCCTTTACTGTAGCTCATCCAGCATCTCTTTTACCAACCAGAGAGTGTGAAACTAGTTTCATATATTACCTAGTTATTCTTTCAAAACAAAAACAAAAAAACAACAAAAAAAGCAAAAACTGACGCACTGCACTAGTTATTATTAGATATTCCTAGTCTTTTTTGTACATGGAGATTTAAGTTCTAAGATGGTTTATATAATAGGTTATACCTACATTTATATTGTAGAATAATATTAAAATGCCTGTTCAAAGACTCCCAAGCAGCAGGGGCAGGCAGATGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCCTATATCCTGCACTTTTATATTTGCCACCAGAGTGGTAGTTTGCTGGCAAAAAGAGAAAGAGAGGAAAAAAAAATTACAATTCTTGCAAGCTGAATTTTTTTTTTTTTCTTAGCCTTGAGTGACCAAGAAGAATTTGCTTGGGGCAAATTGTGGCAAATATTTTCCCAGACAGGGGAAAAGTCCTGCAGATTACAAATGTTTTCATGCCTTGAGGATTCTTTTTATTTTCTACACAGGGGTCTGAGTAACCAATGGATCGTTCATACAGACAAACAAAAAAAAAAACTATTATTCAGAAGTGACCTTAGTATTAACTTCACTATTCTGAACACATTGAAGACACTCACCTCATGTGGACTTTGAGCTACAGACCTTTTACATCCATCCCAGACAGACTGGACGGGTAGCAATTGCTATGCACAGCCTAATTGGCACAGCAGGTTTTTAGAGCCATTTTGAGTTTTTGTGATTACGGAGGTATTGAGTTAAATGGTGAGGGAGGTGTGCCTGACCACAGTGGGACTCGCAGTCATAGATCCACCTGCAAGTTTCCTGCTTCTTTTTTGTGTTTTGTTGCTTTTGAACAGAAAACCAACCATACATATGCCAGTGCCAAGTGGATTAACTGGCTTAGAACATCCAGCATATTGACTCCACCGCCTGACGTTCACAGTGTCTTGTTTCTTAGCAACAGATGCAAAGTGATAAATCAGAATTAGTCGGCGGCTACACATTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCTTGCATCACAGCACAAACTACCAAATTTTAATTATTGGATTCCAGCAATAATTTTTATTGGTTTTCAAACTGGCGGAATTTTGATAGTGTTAGTTCGAGTTTGAAGCTTTTGAATTAGCTCTCTAAATGGTGACCGTTTACAAGGTTTTATCTAGCTTTCTTATTTATACTTGACTGAAATGTAATGAAGACTTTTTTTTCTAATCGTAATTTGACCTAATAGCCATACAAAAAATGACTCTATTAGTACTGACTAGGTTTAGCTTTTCACGGTTGTAGATACTACTTCAGTTTCGGTGCTGGAAAATATGTACACCATACTAACAGAATTGAAAAAGGATAGAGAGAATGGGGGTTTTTCTTTAAAGCAGTTAAAGAGGGCAGCAGAACTTTGGAATGGTGTCCTCAAAAATACATATTCTTTGTGAACATGGAGGGAGATGGAAGTAGAAAGTAAGGTTAATCAGAGATTAAAAACTTAACCCCATTCACATAGACATAAATCAGGTGAGCAGCCCCAGATTTTAGCATAATGTTTTTACTATGATGCTGTTTTATTAATATTTTCTAAATTTCAAAACACAAAGTAAATGTTTAAAAATTGCTGGGTCCTAGTGTTGGTGGCTGTTGGAGTCTTTGGCCCACTTGCTAGCAGTGATGTAAAAATTATTAGCTAAAATCCAAAAACAATTAAAAATCAAAAAATTTTTGGTGCAGAACATGCACCTTGACAATGGTACTAACTTATTATTCTCTAGAACACGTTAGAATAGATCTATTTTTGCCAGAGCCCCCTCCTTCCTTCCAGTCCTCCGATTACATTTCACTAGAGTTCCTTAAGAGATTGCTGTATATTCATGGGACCTTTTTTTAAAAAGAAGCGAAACAAATGATTACTTTTTTCTATGTGATTAATATATCTTACTTGATCTGCTTTTCCTAAACCTCAGTGGCTTTTCCCTTAGGCTGGGGTGGGGGTGGAGGGCAACCTACTGGATATGACTGTTTTCAGATACTTTAAAAAAAAAACTTTTGTAGAAATGCTTAATTTTTAAGCGGTTAGGCACTGAGAGTAGCAGAAATCCTGCAAAGCTTTATAGTCCTCTAGACACTCGCCTTGTTGTTTCTCTGAGCAAAGTCTTGATTTCAATAATAGTGCTTTTCTCATGCCCTGAATCCACTGGAGAAGGGTGTTGGTGTTTTCAGGTAATAACATTTGTTAGCACAAGTATTTCAGACCAACATGTAGTAACCCTCCCCCCATTTATCATTTTCATTTCACTTCTTGCATTCTTTTTTATTTTGGAAAATCATATTGCTATGGTGTGTACCTTAATCTGCCAGCAAACACCATCTACACTAACATTTGTCCCACAAGCATCCTCGAGAAAAAGTTGTTGCACCTTATGTATATCTCAAGCAAACCAAAATATGATGCTCTTCTGCTTTGTTTTATTCTAAATTGTTGTATCATATCTTTCTGAAACCATTCTGAATCTAGTTGAAATTATCAATATTTATGCTTTTAACCTTAATTTCTGGATTCAAACCTGTATATAAATCTTCTGAAAAACAAAAAAAAATTGTCCTAGCCCTTCTCTGTAATGCTGGAAGTGGATGATCAGTCTCAGATGGAGACGCAGTACTGTTCCAGTTTTCTTTAGCCTTTTATTTATTTAGTTATTCTGGGTATTTTCCTATGTAATTTTGAAGTGTGTAGAGTATATAATAGTAACTGAAGCTACAGCTCCAAGAAGCTGGGTGGAAAGAAAGAAAATACTGTAAGACATCCTTTTTAAGTTTTTATTTGTTTGGATAACTATACTGAGATAAGGAAAAAGAAAAATGTCCTACAGCTACATTGAAGATACAGGTTCTTAACCCCAAATTAAGTTAGTTCCCAGATTTTAGATCAAAGTTGCTAATTAATTAAAGCCCCCTTTTTTATAAAGGATATGTCATACTCTCATAATCCTGACAGTCTTTTCCCCTCAAGTATTGGAAATATATTTATTTAATTCCATCAGATGAGCTTTCTACCAATGCCCCCTCAAACCCATGTTGAACTCATCCCCATGTTATCACTGTTATTCTAGTTCCTGCCATTAAAACTGCTGCAGAGGAAAAAAGTGATGGAACACTATGAACAAAAAGGAGCATTTGAACTAGTCTGTTTATTCAGAATCCAACTTGTTTAATCCCCGTCGTTCTCTTATCAAGTCAGATGCTACCCTGACTGAGTCCTAGAAAATTTTGTTTGCACTCTGTAGTCTTTGGCTCATCATATGGAAATGTTTGCACCTATGTAAAATCTCAAGCAAATTGTAAATCGATAACAGCACTAGGAGTAAGCTGAAAACCGAATGACATGTTTTGTTTATGCAGCACGGGGTGAGGGCTGGGGGTTATCAAGGAAGTCTGTTCCAAGTTTGGCGTTTGGCATTAATGTGAAGCAGTGGGACCAATGCTGCCTGCTAACTACTGTACGAATCCTCTGTGTCCTGAAGACCAGCAGCTGGAGGCCGGCATCCATACAGCAAAGGGGAAACAGCGCCACTTCACCGGGGAAAAGGAATTCATGCAAGGCCTGGAGTCATCATTTGTAAAGGGAGAGTCGGGGTGTGCGCAATGCTGTGAGGAGGCTCACCTTTGATTGCAGTGCTCCACAGAGCCCTCAGATAAGGCCAACCCTAATGGGCTACCTCGGCTTTAACAGTTAATTTCAGTAAGTCCTGTTTCCAAAGTTTGTCTTTTTTTTGCTTCCACCTTCAGTGCCACTATTTTCCACTGCAGTGTTTAGACTGGCAAACCACCTTCTCCAGAGAGAACAATGTGTTGCTGAAAATGGGCAGCAGAAGCCAATGCTTTTACATTTGACCTACAAAGTATTCAGAGTGACTGCTAGGTGGGAATTAAAATTTAGCCTTCCCCACATAGGACCTTGTTTTTGCACCTTGTAAAGAGTGTACTAATTGTTAATTAGGTGTTGCTTTTATTTATACAAGTATTCCCAAAGAATTAGATTTGGATTTTGTTTTTATTGGAGTTTGGGGATTTTTTTTTTTAAAGTATCTTATTTAGATCGACTAACATCATACTTACAATATAAAAAAAAGAAACAGTTTTCAGTTCATCTTAACAGATCTGTCTGGTGAAGTAGTCAGGATTTGATGGACTGCTTTACTTTCATTTTGGAAACGATAGTGAAGTTTAGTACACCCCATATTACATAATCCTGTCCTTTTCACTGGTGACATCATCTTCCTCACATGATAGAAAAAGAAGCAACAAAAGAGTAAACAAGGCAGATCCGCTTGATTCCCCTCACACACCTTCATCCATGCGTTCCTTAAAAATGCATAAATACACATTTTCTTCACACATACAAAAAAGCTTCCTCTCATGGCCAAATTGTATTTGTGGTGGTATGATTTATACTAATAATTGAAAAGAAACCTTGTGCTTAGAACTTTGCTGGCCACTGTTTTCTTGTTGCAGCCAGTGGTCAAAATTGATCCTGCCCTTAAATTGATTTTTATGCACAGAACCTAGTTATTGTGAACATTACTACTCTTTCCAAAGATTTTCTAATAACTTGGGCCAGAAGTGGTTACCGAGTAACACAGACCTAATTCAATGCCTCCATGCCCTCCCTCCGCACAGCAAGTCTTACCTCACAAGCTCTAACCTAAATCACAGAGGCGCATGTTTCACAGACAAACAGTTTCACAGACAAACAGTGACCTTCCTTTGCCGCCCCGGAGGGGTGGTCACGTCCCCTGCCACCTCACGTTAGTGCCTCAGCTCCTAGCAGCAGAACTGGGGGAGGGGAGGTTTGTGATCTGGAGCTCAGCATATGCTTGGCAACATTTTTCTCATTTCATTAGCACTAAACAAGTCTTGCTCTCAGGAATTTGTCAGAAAGGAATAAAAACCACCTGAGATTCCACATACCAGATTATGAACTTTTCTTACAGGTTTGAATTGCTTACTTACCTGTCAAAAATTAACCACAGCTTCATTTGACCACCGGATCTTAAGTCTGTTGACAGTTTTCAGCATGACCGAATCGCTCATTTTTTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATGTAATAAATGATTTCCACTTAATGGTACAACAGAATTATTGCTTTCTTAGATGTATGTGTAGTAAGAGTCAATATACACATTTATATAATTTCTTTCTTCAAAATCTTATACTTAATTTGATATTTCTAAAAATTGCACATGTAAGTCATGTGTATAACATGCTAAAGTACTTTAACTGTGATCTTAAAACTGAATAAAAATATTTAATAAAAATTTGAAATATTTTAAAGAT EMBV3_42859 CCGGACTCAGCATTTCTGCCTTGGTGTTGTTAGTGGTTGGCTCTGTGGTAATTGTTAGTC Gene GeneID:507504|CLCA4:NM_001034300:23_cdna Constitutive 0 NULL GeneID:507504 3 GENE CLCA4 MGC127327 chloride channel accessory 4 EMBV3_42672 TCATGGGACTCATCAAAGGTCACTATGAGGCAAAGCAAGGTGGATTTCTGCCAGGGGAGG Gene GeneID:507496|HGD:NM_001144852:38_cdna Constitutive 0 NULL GeneID:507496 1 GENE HGD NULL homogentisate 1,2-dioxygenase (homogentisate oxidase) EMBV3_33848 CACACATATGACCGCTCCATCATGGTGGACGGAGATGCATATGTCATTGTGTACTCAGTG Variant GeneID:505165|RRAD:NM_001045913:117_cdna 529^609 1 EMBV3_12715 GeneID:505165 18 GENE RRAD MGC137228 Ras-related associated with diabetes EMBV3_14499 GCTTGTGTAGCCCTCAAAGCAAGTGTGAGGAGGACTCGGCTCCCTCTGAATACAGTTTGA Gene BVT0102_074068 + 1 EMBV3_26824 GK000001.2:144845411-144887618 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18072 TGGTTATTGACCTGCCCCCATCAAGAAATCGGCGAGAGAGAGCGGAGTTGAGGCCAGATT Gene GeneID:539234|STAG1:XM_002685052:138_cdna UTR3_Alt 2 NULL GeneID:539234 1 GENE STAG1 NULL stromal antigen 1 EMBV3_07847 AACCGTGGAAAGGGCGGAGCGATTAGGATGGATCAAATGGCTATCGCTTGTGGATCTCGA Variant GeneID:506566|ALG5:NM_001142365:49_cdna 502^615 3 EMBV3_18159 GeneID:506566 12 GENE ALG5 MGC137195 asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae) EMBV3_19755 GCACAAGTGCGAGTTCTGTGACAAGTGCTTCAGCCGGAAGGACAACCTGACCATGCACAT Gene GeneID:787809|LOC787809:XM_002692505:631_cdna Constitutive 0 NULL GeneID:787809 13 GENE LOC787809 NULL similar to zinc finger protein 64 EMBV3_29336 GGGCAGGGGATATGGAGACTTAGCAACAAACATTGGCTCAACAAATGAAAAACCCTTCAC Gene BVV0102_281372 + 1 EMBV3_28769 GK000008.2:11064778-11198676 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00073436 TCONS_00201334 TCONS_00054120 TCONS_00085042 TCONS_00192189 TCONS_00081557 TCONS_00066205 TCONS_00201377 TCONS_00192192 TCONS_00151324 TCONS_00058089 TCONS_00192191 TCONS_00184696 TCONS_00016526 TCONS_00129429 TCONS_00152803 TCONS_00184697 TCONS_00251614 TCONS_00220090 TCONS_00048995 TCONS_00060246 TCONS_00199917 TCONS_00252867 TCONS_00164317 TCONS_00109880 TCONS_00048033 TCONS_00124051 TCONS_00189997 TCONS_00135598 TCONS_00030426 TCONS_00022348 TCONS_00037648 TCONS_00037617 TCONS_00022124 TCONS_00230914 TCONS_00203551 TCONS_00223475 TCONS_00251840 TCONS_00184695 TCONS_00062751 TCONS_00037838 TCONS_00209837 TCONS_00192190 TCONS_00015588 TCONS_00129205 TCONS_00034471 TCONS_00041515 TCONS_00143669 TCONS_00151323 TCONS_00000529 TCONS_00060247 TCONS_00179493 46 XLOC_006328 XLOC_045201 XLOC_122981 XLOC_031929 XLOC_051775 XLOC_117131 XLOC_050436 XLOC_040919 XLOC_123023 XLOC_092086 XLOC_035886 XLOC_111408 XLOC_008827 XLOC_078142 XLOC_092568 XLOC_154555 XLOC_133407 XLOC_029126 XLOC_036632 XLOC_121569 XLOC_155808 XLOC_100199 XLOC_065784 XLOC_028165 XLOC_075603 XLOC_116032 XLOC_081821 XLOC_016679 XLOC_013018 XLOC_021478 XLOC_021447 XLOC_012795 XLOC_140404 XLOC_124202 XLOC_136775 XLOC_154781 XLOC_037478 XLOC_021667 XLOC_128348 XLOC_008519 XLOC_078064 XLOC_020687 XLOC_025321 XLOC_088090 XLOC_000141 XLOC_109265 Coding TCONS_00000529 XLOC_000141 Coding Coding - 1:45088092-45096984 - TSS270 8451 4 TCONS_00000529_10 143 0.745473908413206 2 0.0497131931166348 2.01012307707297e-05 1.49871009079085e-05 1.36625311347943e-05 4.53987540290904e-06 1.24531364209072e-05 5.00814608360259e-06 8.46442312822931e-06 1.24185267133133e-05 4.13121620626016e-05 0.001823279532659 0.000814409045036406 0.000443886703423644 0.000426802436486759 0.000631969837416122 0.000420788496196143 0.0164351832051245 0.0118459757916584 0.0133511864103435 1.34853947675417e-05 9.74488686084332e-06 4.71379726774531e-06 0.0113995265993752 0.0116294525732748 0.0115848317310599 2.19528616543606e-05 1.81962347473363e-05 1.11450810621553e-05 0.00508280936174051 0.0025318551055437 0.00742716955264329 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1225 90.86 0.102828067684298 TCONS_00000529_10 sp|Q08DI6|RNF11_BOVIN RNF11_BOVIN RING finger protein 11; 6e-28 104 42.47 0.895104895104895 0 noncoding 1 1 1 1 0.0450297516627036 0.769473730118356 0.00899590186576138 0.845664037517258 TATTTCGAGAAACTGATCCCAATTCTTTATTTTCCATGGTCTACTTTTATACACTGAGATGTTATGCAAAAGTCACATGGGGTCAGCAGTCCTGACTTTTATCAAAGTCAGGTGCTTCATACAAATGTATACAGAGGTCTTAGGGGTATTACATCATCTTCTGGCCAGGGGGCCTGCTGACAATTTATGACCCTCTCCTTATGACAGCGGTCAGTCAACCAGGACACTTATTTCTCCAGGGGTGATTATTCTTAAAAAAGACTCCACCTTCCGAAGGTACCAGATAAAGTTACATTCCTATAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAACCTAAAGTCTAACGTGATGGTCCAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTGGCTCAACAAATGAAAAACCCTTCACCAATACAATTTCTAATCAGCCCACTACTTATACTAATGGTTTTCTAACTTTTCTAAGGAATCTGTTTTTAGAAGGTTTAAAGCATCTCGTGCCTCTCACGGTTGGGAGGCTGTGAGCAATCACTTGTGGCCGGACAAGCCTGTCAGGCAGGCTAGAGAACCTTCAAAGGAGTTTGTAGGTTAAAACACTCTTGTCATGCCCAGGAGTTTTTATTAACTGGAGCTGTAAGTTAATTCCTTCTCCGAAAGAGGTGGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAGAGCACAAAGTAGTAAAGTAGGCAGGCTCTGGTTATGGGGGTAGATGCTCGAGGATTTCCAGGGGGACTCCTGAGACTTGATCCCGCCTTTGCGTATGTCGAGCCTCCTTCCTCATGACCTTTGCCATGGGTGGAGGTCCTCACACCGGCTCCCAACAAGAGTGAAATAGTTGGCTTAAAGCTCAACATTCAGAAAATGAAGATCATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAACTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCTGTCTAGTTAAGGCTATGGTTTTTCCAATGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCATTTGACTGATGCTTTTGAACTATGGTATTGGAGAAGACTCTTGAGAGTCCCTTGGACTGTGAGGAGATCCAATTGGAAGGATCTATGTTGGAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGCGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGAAGGGGACAACAGAGGATGAGATGATTGGATGGCATCACTGACTCAGTGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATAGACAGGGAAATCTGGCATGCTGGAGTGAGGTTGGACACGACTGAGCAACTGAACTGAACTGAAAATGAAAAGATCTAGCTTGATTTTTCTTCAAAGGTAATTTATGATTTATTATTTAACCTGTGTCCTATGATTGCCAAATTTTTTAATATTATTGGAAAATAAATGAGTTGAAAAATGACATTACAGGAAGATCAATTATACAACTAGATAATTTATTTCAGGATTCTGCAGTATTTTGAAGCTTGGAGAATATTCTGGTCCTTAGGTACAGCAGCTAAGTGTGATCTGAAGAGACCCACGCCGGATGGTTTTCTCAGACTTAGAGTACGACATGGGGTGCTCCAGAGCCCTGAAAACTGTATCTTTTTACAGCGCCAGCATTTCTCCTTTTGCCATCCTGGCTTGAGAGGATGCTGGTAGCTTAGGTGTTGTCTTGGGAATGAGGAGTAGGATGGTTCTGCTGCTAAGAACTAGTAACAGTCTCTAGCTGCATCAGGACAACACAACCTCACAAAGCAGTGAGGCCACTGGCCACTCACAAAACAGAGATGGCCACTCTGTCTGGCAGACTGAAGGAGCAGAATTCCAGGAAATGCCAGTTTTCCATAATTGTATCATTGCCATGTTCTGTGCCTGGGGGACATACTTTATTAAAGAGGTTGGGTCGATTAGATTTGTTCTGACTGGTATCCAGGTGGGTTACTCAGGTGGCTGCCCTGGATTACCTGCATGATGAGATTATGTGACCCAAGGGGTTCCATACCTGATGAGGTTATATCAATGATGGGGTTAAGCTGCATATAAGAGCTCACCATCTGAAAGGGGCTTAGTTTCTAGAGAGACACTCCGTGGTGACAGTGACCCCAGCAGAGAACTGGCTTTGTCATCTTCTCTATAGATTTGGATCCTGACCTGGGAACCAGGAGGTGTCCTGCAGAGCCGGCTGTCAGCAGCGGACAGGGACCTCACCCCCAGGCCTGAAAGATGGGGAACTGCATCGGCTCCAGCACCGGGGACGACCGGCCGGTCGCTCGGTTTCCGGCCCCCCTCCGAGAGCGCAGAGGCGGAGACGGCCCGGGGGCGGGGGGACCGCGGGGTCCGGAGCGGCGCGGGGCGGGGGCAGCCCCGCCGGGAGCGCCGCTGACCTTCCGTCGAAGGATCCGCCTCATTCAGAGCCCACCTCGAGACGTGTACGGAAGGGATGGATGCGAGACGAAGACCACCGAGTGCGCGGTCTGTCTGATGGACTTGGTGCCCGGGGACCTCATCCGGCCTCTGCCCTGCAAGCATGTGTATCACCTGGACTGCATCAACCAGTGGCTGACCCGGTCCTTCACCTGCCCGCTCTGCCGGGGGCCCGCGGACGCCGCGCAGCCTTTGTTTGAGGACGCTCTTGAGCCCAGACCCCTGGTGTGATTGCAAGGGACCCATCATTTTTACTGATTTCCATGTTCCGTACTGTGCCCAGATAGCCAGGGGTTAGGAATTTAAATCGTGCACAAAGGTTTATTAAAAGTTCCTGGAATGTGGCAGATGTCCGGGAACCGTTTCTAATGTTTTAGAAAGATAGGGAGAAATAGCGGGTGAACCTTGACCAAGTGCTGAGAGGTATAATGACGTCTTAGCATTGTCCTCTTGCTAGAACTGTGCACCCTGTTTCAGCAGCTCTACGTGTTGCATTGCATCTGTTGAACGTCAGGGAAAGATAGTGGTTACTCTTCCTAAATGAAATCAGATTCTTCTCCCCCATCCAACTTAAAAGTTGCTGGCATTTAGGCCACAGTTTTATGAAAAGTTACAATTTATACAACTGAACTAAAATAAAATCAAAGTATGTATGAGTGAATACCTGAAGAATGTTATTCTCAATTGAGCCTTCTAAATGGTCTTATCCGTTTGTTCTCCATCATTTTGAGACCCTTAACCCTTTCCTCTTATAAATCCAAACCAGGTGAACAAAGTGTTCCAGGGAAGAACAGTCCTGAGCAGGTTTATTATCTGTGTAATCAGGGCGTGTCCAGGCACTTTAGCTGTGTTTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTATCAGGTTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTGCATTGCCGGTTCCTTCTCCGGGGGATCTTCCTGACCCAGAAATCAAACCCGGGTCTCTCACATTGCAGGCAGACGCTTTACCATCTGAGCCACCAGGGAAGCCCAAGGGAAGATAGTTCTCCATTAAACTGGAAGTCAGCCAGCTTCACTCCAGTTCCACTTTACAAGCCTTATCAATTTACATTTTCCTACCAAAGCAAATACTTAAAGTTTGAACTTTCAAAATTTTCTACTTTTTATTTGTCTTTATCTCTTATGGTTGTGAAGAGCTAATTCATTGGAGAAGACCCTGATGCTGGGAAAGATTGAGAGCAAGAGGAGAAGGGGGTGACAGAGGATGAGATGGTTGTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTATACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGATAAGGGGCGCTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAATCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACGGGAAGCCTTCCACTGACGAAGAGGGGAGCGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCCAATGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCACTGCCCTGTGCTTAACTCTAGAGCTCGGGTCAGGGCCACCAGCTCCGCTAACTGAGCACTAGTTTCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGATAGTGGCAGGATTTAAATTTCCACAAACTTTAAGTTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAATGCCGTTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGACCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCGATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATACGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAATTTTGTAGATCCCGTGACAAACTTTGTTCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAATCCTTTCTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGTTCCACATTCATGAAAACAGATGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTCTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCTGGGGGCGGCTTAGATCCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGATTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCTTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTGCCTAAGTCCCTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGTGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATCTCTTACCCCTTGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCAGGTACGGGGGCAAAGTAAGAGGATAGGAGGGAGCTGAAGAT TCONS_00000526 s 3' 6565 TCONS_00000526 s 3' 6565 EMBV3_30311 CTTTTGTTAACACTCCTCTGGAGTTTTTCAGGGGGTAAAAGTAACATCAGTGGAGGGTAT Gene GeneID:506325|ZMYND11:NM_001045940:23_cdna Constitutive 3 NULL GeneID:506325 13 GENE ZMYND11 MGC137432 zinc finger, MYND domain containing 11 EMBV3_40769 TGTTGCCACAGAAATGAAGCCTGTGTGGATGAAAGCGACATGTGGGAGTCCAAGTGCTGC Gene GeneID:515631|LOC515631:XR_083902:616_cdna Constitutive 0 NULL GeneID:515631 17 PSEUDO LOC515631 NULL similar to Coiled-coil domain-containing protein 60 (Aaa-protein) (Protein TSP-NY) EMBV3_26837 CGACGTGTCTTCCAGTTGCACATGTGTGAGCTTTTTCCAAGATGGCTTGAAGGCAGCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01883 GGCAAAATAATCTAAAAAGACTAACCTGCCCTCCTACCCCCATACTGCTGTGAGACTGCC Gene GeneID:510586|PEA15:NM_001075456:263_cdna UTR3_Alt 1 NULL GeneID:510586 3 GENE PEA15 MGC139825 phosphoprotein enriched in astrocytes 15 EMBV3_18716 CTGCAGCCTCCTTGAACATCACAAAATCCATACCGGGGAGAAGCCTTACCAGTGCAACAT Gene GeneID:539620|ZKSCAN4:XM_002697448:46_cdna Constitutive 0 NULL GeneID:539620 23 GENE ZKSCAN4 NULL zinc finger with KRAB and SCAN domains 4 EMBV3_04555 CCTGCTGGAGCTGATGATGCTACAGAACGTTCAGATGAACCAGCTCTTTCTGAGTGGCCA Gene GeneID:100336106|LOC100336106:XM_002696095:150_cdna Constitutive 0 NULL GeneID:100336106 19 GENE LOC100336106 NULL Uncharacterized protein C17orf72-like EMBV3_30986 GGTCAGACTATAACTATCAGCCGAGTAGAAGGAAGGCGACGGGCAAATGAAAACAGCAAT Gene GeneID:100336506|LOC100336506:XM_002688274:29_cdna Constitutive 0 NULL GeneID:100336506 6 GENE LOC100336506 NULL Fip1l1 protein-like EMBV3_17213 AGATGTGCAGCAAGGACAGAATAAATCTAGGAAAAGTGAAAAGTTTCATCCAGTGTTTGA Variant GeneID:511003|CXHXORF23:NM_001083665:2_cdna 207^266 5 EMBV3_38705 GeneID:511003 X GENE CXHXORF23 NULL chromosome X open reading frame 23 ortholog EMBV3_40082 TCTCCCCGCCCCCACCCTCCAGTCACCTCGAGTCACCTGTAAATTCATTTGTCATCTAAA Gene GeneID:613901|NSG2:NM_001076296:160_cdna Constitutive 0 NULL GeneID:613901 20 GENE NSG2 HMP19 MGC139744 HMP19 protein EMBV3_32784 ATGCTGAATGTAGCTCCATGAGGGAGGAGCTTTGTTCACTACAGGACCCTAGGCAGTTAG Gene BVT0102_339091 + 1 EMBV3_42212 GK000001.2:108454123-108582913 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03176 GGCCTACAGCAGCTTCGGCGGCGGCAGGGGGTTTCAGGGATGACTTCTTAGGAGGCCGGG Variant GeneID:517409|EIF4H:NM_001075752:197_cdna 68^417 1 EMBV3_25171 GeneID:517409 25 GENE EIF4H WBSCR1 eukaryotic translation initiation factor 4H EMBV3_33430 TGAGGGTACCCAGTAATGCGTTCCTCTAAAGAGATCCTCGTCCAGCGGCTCGAGGTTGAG Gene GeneID:100297330|LOC100297330:XM_002692344:156_cdna Constitutive 0 NULL GeneID:100297330 13 GENE LOC100297330 NULL hypothetical protein LOC100297330 EMBV3_23635 TCGACACCTCTGTGTTCCCAGCACTCACCCTAAACTGAACAGACGGGGAGTGGTCTTAAT Gene BVV0102_301393 + 0 NULL GK000014.2:4167603-4182517 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051198 TCONS_00051201 TCONS_00051199 TCONS_00051204 TCONS_00051202 TCONS_00051203 TCONS_00051196 TCONS_00051207 TCONS_00051197 TCONS_00051206 TCONS_00051200 1 XLOC_031128 Coding TCONS_00051207 XLOC_031128 Coding Coding EIF2C2 14:4149362-4179733 j TSS38237 13503 1 TCONS_00051207_2 423 10 0.555712874547251 0.00326527739342039 0.0024430567948833 0.00220109903192602 0.00214948933558273 0.0020237549366316 0.000506404095686587 0.00105167766234399 3.13429719755392e-05 4.57026858869412e-49 0.000728152004254994 2.86376873370382e-06 0.00022278538189424 0.000385781691053951 0.00100355297351086 5.83778844923742e-06 0.00290575444507071 8.35035807339788e-14 0.00205387711703603 0.00242489335719508 0.00144617538350374 0.000640136125926791 0.00144376198554434 0.00144524053911715 0.00130747185882814 0.000360549635404522 0.00117331128324367 0.000683748617698211 0.000351211982909627 0.00029947200195842 9.06286165676212e-22 NM_205794.1 EIF2C2 Bos taurus eukaryotic translation initiation factor 2C, 2 (EIF2C2), 0.0 2361 99.85 0.0972376508923943 NM_012154.3 AGO2 Homo sapiens argonaute RISC catalytic component 2 (AGO2), 0.0 2964 90.28 0.16255646893283 TCONS_00051207_2 sp|Q8CJG0|AGO2_MOUSE AGO2_MOUSE Protein argonaute-2; 0.0 886 100.00 0.997635933806147 1 coding 0 0 0 0 0.0429392035705058 0.707009339111888 -0.0144873794633885 0.766116667178737 GAGGACTGGTTTCCTTGAACCTTTAAAGTTTCCTGAGTCCCCCTTTTGCTTTTCTAAAGAATAAGGCGATTGCCACCCCAGTCCAGGGCGTGTGGGACATGAGGAACAAGCAGTTCCACACGGGCATTGAGATCAAGGTGTGGGCCATCGCCTGCTTCGCCCCCCAGCGCCAGTGCACGGAGGTGCACCTCAAGTCCTTCACGGAGCAGCTCAGAAAGATCTCGAGAGACGCGGGCATGCCCATCCAGGGCCAGCCATGCTTCTGTAAATATGCCCAGGGGGCGGACAGTGTGGAGCCCATGTTCCGGCACTTGAAAAACACGTACGCTGGCCTGCAGCTGGTGGTGGTCATCCTGCCGGGGAAGACCCCCGTTTATGCCGAGGTCAAGCGTGTGGGAGACACGGTGCTGGGCATGGCCACGCAGTGTGTGCAGATGAAGAACGTGCAGAGGACCACGCCGCAGACCCTGTCCAACCTCTGTCTGAAAATCAACGTCAAACTGGGCGGCGTGAACAACATCCTGCTGCCGCAGGGGAGGCCTCCGGTGTTCCAGCAGCCCGTCATCTTTCTGGGGGCAGATGTCACTCACCCCCCCGCCGGGGACGGGAAGAAGCCGTCCATTGCTGCCGTCGTGGGCAGCATGGATGCCCACCCAAACCGCTACTGTGCCACCGTGCGCGTGCAGCAGCACCGGCAGGAGATCATCCAGGACCTGGCGGCCATGGTGCGTGAGCTGCTCATCCAGTTCTACAAGTCCACGCGCTTCAAGCCCACCCGCATCATCTTCTACCGCGACGGCGTCTCCGAGGGGCAGTTCCAGCAGGTTCTGCACCACGAGTTACTGGCCATCCGTGAGGCGTGCATTAAGCTAGAGAAGGACTACCAGCCAGGCATCACGTTCATCGTGGTCCAGAAGAGACACCACACACGGCTCTTCTGCACCGACAAGAACGAGCGGGTTGGGAAAAGCGGAAACATTCCAGCAGGCACAACCGTGGACACGAAAATCACCCACCCAACTGAGTTTGACTTCTACCTGTGTAGTCATGCTGGCATCCAGGGAACAAGCAGGCCCTCGCACTACCATGTGCTCTGGGATGACAATCGCTTCTCTTCCGACGAGCTGCAGATCCTCACCTACCAGCTGTGTCACACCTACGTGCGCTGCACACGCTCCGTGTCCATCCCGGCGCCGGCATACTACGCTCACCTGGTGGCCTTCCGGGCCAGGTACCACCTGGTGGACAAGGAGCACGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAGTAACGGACGAGACCATCAAGCGCTGGCGAAGGCGGTGCAGGTCCACCAGGACACGCTGCGCACCATGTACTTTGCTTGACATGTTCAGTGTTTCCAACTGTGTACCGAGTAGGATTCACATGAGACCAGCTACACTCAGACCAACAAATGCCCAGCCCTTCCATGACAGCCAGCATCGAACATGACACGTCATCCATTTTAGTAGATTCTCCATTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAACTGCAGACCTGTATGAGACCCCCATTGTCGTAGGAAATATGGTTTGCCAAAATCTTATAAGCTGCTTACTGAAATAGAGTCCCGTGTTTCCTAAAAATCTCCTAAAACCAGTCTATGAACTCAGGGCTTTAAAACATTTTTAATTTATTTGGTCATTCAATTTACTTATTTTTAACACATGATTCTCTATGAAATTGATGGGCTCAAACTAGCTGTGAACATTCTACAAGAGTGAAAGCAACACAAAACACGTTGTGGTTTTAAAGCCTTGAACATTTTGACGTTGTCACTAAAGTTTATTTCAGAATGATGCCGGCGTGCTCCTGATCTGGCTCCCACCAGCTGTCCGGGACCCAAGGGCAGGGGCCAGGCGAGACGCCCGGGGTCTCTCATTCTGCCACCGGCCGCCTTCCGCTCAGCTCGAAGGAGGGCGCGGTGGCAGAAGATGGGCCGTGTGTGTTTATAACATTTACAGGTCCAGAGAGATTGGCAGACAAGTGCCATTTTAATAAAAAAATTATTTAAAAAAAGAAAAAAGACAACATGCTGACAGTCTAATCATAAGAGCTGTCCTATAGGACTGTGACATTTATTTTCCAAAGTTTCTAAAGAATACGGGTCTGTGGTGATAAATACAGTACAATCCTTTTTCACTGTTATGTCTTTAATGTAAGAGAAAAAATATATATATCTGGTTTGCAGTATTAATGTGGTAGATAGATGCTGTTTTTCATTTTATTGACTACGGGGTGCTTCTTGTGATCTGTTCAGCATATCAAGAGAGTTCTGGAGCCCTGACCACCCCTTGTGGTTCTCAGTGCTGAAGTGCAGGAGTATGCGGTTGACTCTGAGTGCCCGCGGCCCGCCCCTGAGTGCTGAGTGCCCAGCCTGGACCCTCCGGGGGCCTGGGTGTGCTCCCAGCAGTCGCTCCCCCTCCCCCACCTCCTCCCCCTCCCCCCGTGTGTCACTCAGCCGATTAAGCACAAATGGAATGTATGTGTCCTTCCACTCCCGGAACGAGTCCGTGCAGCAGCGTGCACCTCTCTGGGTGTGGTTTGTTAGCCAAGCGTCATAGGATCTATGCACTGAAACTAGAGAAGGCTGTTGGCGGTGGCCCTCTGCCGGACACGAGGCCAGTGGTCTGTGCAGGAGCGCTGCCCTCCGGGGGTGGCGGGAGAGGCAGGCCCTTCTGCTAGGATTTGCGTCCTGGCCCCAGACGTGGTTTCGCCAATCGAGAGCCGTCGCACTAAGAGTAGTGTTGTGGGCGGCTCGACGAGCTCCGCTGCGCTAAGTTGGCTTTCTGTCCTCGCAGGCAGCTGTCACAGAAACCAAATCCACGATCAGTACAGAGTCCAAGGAGACGAGCCTTCCCCTAGCGCTGCGTCCTGTCTATAGGTTTCCTCGGGCCCTGCGATGGCCCCGTCCATCCAGGCCTGACACTGACCTCTGGCGCTGGGGTGTCTCCTGCTGGGCTGAGCGCCTGCCTCCGTCTTGTGCAGGGGCTCTGAGGGGCCAGGAGGGGTGGGGACACGCCGTGGGGGACGCTTGGCCTGGATTTTGGGGGCAGCGACAAAGGGATGACTATTTGTATCAGTATAGCTCAGAGTGGTGTGTGTGTGTGTGCGTGAACGCACACGTGTGTGCACATGTGGGTGTCTTATTAATGGCATTAGTCTCTTCTTGCTGTATCTTTTTTTTTTCTTTTTAAATGACAGAAGCCTCTGCTTAAAGAAATGTTGCAATTCCCTGTCATTTTATTATCAAGTGGCACTTTCTCCTATTCCGAGGGACACCAGTAAAGTACACTCTTGACTTAAATTACTGGGAGCTTTCAAGCAAAGGAGGGTATCTTTTCACTAAAATATTTTTAAAGTCTTCAATGAGGTTAGTTTTCAGCCATGTTCAGTATCATGTAGAACTGTGTCTCTCCAAGGTATGTTTTACCACTTGCAACAGGATCTCGGGAGGTCGGGGCGGCGGTGGTAAAAAAAAAACTCAGTTTCCCGCGCTCGCTGCCGAGTCAGAGCCTCCAGGGCGGGTGGCTGGGCATTGAGTTTGTCACCATCAGCTAGGGGCTTGGGCTGCCTGGAGTCTGAGAACTTCTGATCTAGAACCTTCTGGAGAGGAAGCTCTCCCAGGCACCCCTTCTGGCAGTGCAGGAAGACGTCTTCCTGAGCTAATGCGTTGGGGAACACTACAGGCTGGCAGAAAATGAGACCTAAATTCTTAAAAAAAAAAAATCATTTTGAAGAAAAGTTTTCTTTCTAGAGGGCCAAAGTACTTTGAGAAGGGTACTTTTTACAGCCCTAGGCTTGTTTTATGAAGTTTTTACTAAAGAGCATTCGTAAACCAGACGTCTCCAGCTGGGGTAGCTATATACCTTGGTGCATGTCTGATGGCTCAGAATTCAAATGGCTGTAGTTACAGTTTCTCAGGTAAAGAACTGTTTCCCCAAATTCCTACCAATCCTCCCATTATTAAGATAAGTTCTGAGTCAGCGTGAAACCTCAGAGTACAGTAGAGTGAGTTCAAGCCCTGCTCACATGGAAGCCGAGAGGGGCCCCTGCCTGCCTGAGCAGGTCATGCCCACCCAACCCAGAGTGACCTCGAGGCCGCCCCGAGAGGGGCTCCGGGCACCTCCGGGCTCCGCCCATGTTTGAAGGGTTTCCTGAGGTCCGTGCAGGTTGCAGAGGTGTCCGCTCGCTGGCTTTGCCCCACCCCACTGTTAAGGAAGGTGTGCCTTGCTTTAAGCAGACTGAATGTGAAAATTGTGATGTAGAAATCTGGATTCATTTGCAAGGAAAACTGGGATTTATCTCATCTCTTTAGAAGAGGTGTCTGAATTAGATTCTTATCCTGGTACTCTTCCTAATGTATTTGGTAACATTCACCTGAAGAAAAGTTAATGTAGTCCCCTCCCTTCACCACTTCCTAGTCTGTTCGACGGGCTCTCGCCCTGATTGCTAAGTGATGAAAGAAACCCAGGGAGCGATGTGGGTCGCCATGAGGAGAGCCCTCTGGCCCTGCTGAGATGCCATCCTGCTGCTGGTGTACTTCCTTTGATAAGCTCAGATGTCCCCGGTTCAGATAGATTTTGTAAAAACTGGGCATACCTGTACCTTTAGAAAGGGATTGTTTGGGTTTTGGTTTTCTGTTTCAAAAAGTCTTCACAGATACACTTGATACTACATTTTAGGGTCTGCCTCTTCTTTTCAAGATTGTGTTGCTTTTCGGTAGCATTCTCACACTCCGTGCATGGGTGTTTGCACCCTGGAACCACGAGACATCCCTGGCCACTTTGTGGCCTTCCCCGGGAGGGCCTGGTCAGAGGTCGAGTGATCTCTGTGTGCTGTGTGAAGTTGGCTGCAGTCAGTGCTGTGATTGATGTTTACCCCAGCGTGTGCTCCTTAAAAGAGACAATTCAAGTTCAGTTACTACAGCAGGGTTGTGGGGGGTGGGTATTGATATATATTGTACGTTACTGTTATTGTTGTTAAATGCAAATGTTGCTATTTATTTTTTTTTTCCTTTCTGCTCTGGTTTGATTTGCCTGATAATGGATATTCCCGTGCATGTGGTACCTGGTGAATATGATAGAAATTATTTCCCCTAACTTTTATAAATTACCTGATGTTTACCTTCGAGTTTGCTGGATGATTTATTTTTGAAAGCCACAAATGTAATTTTTCTGGATGAATTGTTTTTCTTATATATGCAGCAGTGTAGTTTTGCATTGATCTGCAGGGTGATTTAAATTTTATTTTTACAAGGCAGTTTTTCAGGCAGATTATATATTTGATACAATACGTTAAGGGTAGGCCAGCCAAGCGTCCTGCAGCGGGGAGACCAGACTGCCTCGAGGAGGCCTCTGGAGGCCGGGGCGGCTTCTCTCGGCCGCTCGGTGCCAGGCAAGCGCTCGGCTTGCTTCATGGAGCCGTCCCTCGGGATCTGACGGAATCCTTGAGTGGGACTTTGATCTGTTGGACAGTTCAAAGGATTTTTTCATGGGCATTTTCCTACACCTAAGGCAGTTCCATTAGGAGGAGCTTTAGAAGCTGACATAATCCAGACAGTGGACAATCCCAGTGGCCCGGACAAGCCATAGAATTTCCCTGTGACCTCTAACTCATCTCTCACGCTCATGAGAAAAGGAATGTACAAATAAATAGAAACTTCCTCAGTGCTCATACACCTCACTTTCAGAATGCAGATACCTTATTTATATTTAAAGCCCTCCCCCAAAGCAACCAAGACTATTCTCTCCAGCTGCCGTGCCAGCAGTCGCGGCTGCAGTGACGTTTCTCAGTGTAGACACCGTGCACGTGTGACTATGTAATAGGGCTGTCCGTGTTACACACACATGCTGACTTTTTGTAAGGAAAATTTTCAACTCAAAATAATTGCACTGATTTTTTGACAGCTTCCTTTTTATTATGTCCAACTTTGCATCTGCTGTACTTGTTTGAAATGATTGTAAATAGACTTAGGATAGCAGAAATGGTGTGAGACAACGCGTTGCTTTGTTCAGTGACTCTGCCATGTTTTCCAGTGTTACGTGTTAGAGCTGTGTGGGCTGCCCGCTGCCCTGCCCCCTCTGCAGCCGTGTCTTTGTGTGCGTGTGTGTGTGCGTGTGTGTGTGTGTGTGCGCACATACGTGTTGACCATTCATGAAGGACAAGTTAGCCTCTTCGCCGTCTTTTTCTGGAAGGAAGTTTGTGGTCTATCGGAAGGAGAGTGGGCTCCCTCCTTGCGGTCTGAAGATTTAATTCTAAGAGGATTAGTTGTAAATCCCTTGAATACTTCTGGTCTGTTTAATTCCTTGTTATTTGCCATGACTCCCTAAAGCATTTGCTTCTACCTCCGTCCAGCATTTGACAGCTTGGAGAGGAAGTGTCTGAACGGCCAATGTTATTAGCGAGTCACAGTCCCCTTGCTTCTCTTTGGTCAGCCGTCATTTGAAAGCCATGAGGTCGCTGTTGTGTCAGAACTGTCATCTGTGGCTTAATCTGTAGATGCCAGGCAGACCTGGACCCCAGTGCTGTCCGTTGCTCCAGGCCTCCTGCGTTGGCCAGGTGAGAAGTGTGGGCTCTAGCCCAGCATGTGATTCTACTTGTGGGCGGGCTCCCCAGTAGCAGACACACAGAGGAGCTTTCACACCCACGCAGCCAGTCACCTGAGTGTGTGTTCCCGTCACGTTGACGCCATCTCGGTGCCCTCATTTAACGCTTTTTTTTGGATGTTTTGCCATTTTGTTGTCTAAAGTGAATGTATTGGCTTAGCCATATCACTACAGAAGGTGGTTTCTCATAAGTACCTTTTAGTATAAAAATAAGTAAATTAACGCAGATAAAGGCTACCTCTGAATTCTTAACAGGTTCATGTTTGCTTTTAAGCTTAGCTGTCCACACTGAAAATAGCCAAAATGTTGCCTGAAAAAACAGAATCGTGAACACCTCTCTGTTCAGTTCTGGCTTGAACATTGCGTGCCATACTGTGACCCCCGGGCAGTCCCCTCCCCGCACCCGGCTGTCCGGGTGGACCAGGGACTCCTCAGGGCTGCCCGGCTCCGACGTGCTGGGACTCTCGGTGGCCGGCAGGAAGGAAGCGAGAGGGCCCTTCTGCGTCGCCCTCGGGTGCAGGGCCGTGGACGGCGGGACCTGGAAGGGACCCGCTGTCCTGGCATTTCCCTGTCCTATCTGATGTAAGGAAGCACTTTTTCTTTCCTGCTTTATTTATGAATGGGTTGAAAGTGGCTCCTTCTCTCTTCTCCCTTTTTGTACACTCTATAAAATCACAAAGGTGCTTAAACACCAACTCTCGTGCAAATAGTTCTTTTACAGTAGCTGCATGGTTTCAAAATGCAGTGCAGGTGTCAGTGACCTCTGACTTGGGAACCCTTGAGTGCTGTCACTCCATACTTTAAAATGAGCCAAGGTTCAAAAGCAAAATGTTCTGTTCAAATCCAAGGCTGTTTGTTGAGAGGAGCACAGGGGCCAGGGCAGCAGCATCCTGAATGGGCGGCGGTTCCCGCTGCCGGTGCCCCGGACCGGACGCCCCCTGCGGGGCGGCTGGCCTGGGAGAGCTTGACATCCCGTGTGATTTACCACTTTGCCGTCAGAAATGTGCTGTGCCCACACGCTGCTGTGGGATTATCAGGCTCACCCTCTGCTCCTTTGCATCTTTTCTTTAGGTTCCTCGTGTTCTCATCTTCAGAAGGTGAGCATTTGCTCCTAAGTCTGGAGGGACAGGCGTCTGGGTGGGAGGGGGCGGCTCCGAGCTCCTCTGGATGCACCTCAACCTTGACTTTGCCCCAGAGAGGTTCCAGGGGCACCATTAGGAGGAAGCCCTTGCCTTTAACGCCACATGCTGTGCTATAATTCCCAGAGCGCCAAGTGCCCTTTGCAGTCTTAAGAATGTGCAGTTCTGCAGTCGCGCTGTCCTACAGGCAGACCACCCCAAGGGGCATGGGCGTGGGGGGTGCCTATGGGGGTGCCCGCCGCGTCCACTGACCCACTTGAGCCCAGTGGTTGCTGGGCTCTTCAGTGACTCGGTTTGCAGCCAGAATCGCAGGCAGGGTTTTCCAGTGGCCCCCTGGGGTCCCAGCATGGGTCTGCTCCCTCCTCACCACTTTTGCGCTCATGAAAGGTCACTAAAGATGAGGGAACTGAAGGAGATTATTGGTGCTTTTGTTCACATGTTTCTGTCTTACTGGTTGATGTGAGAAATGCAGTGTGTTAGACCTTAGATGGCCCTGGTGGTGTGACTGAGGGTTGAGTCCTCACCTTCAGACAGTCAGAGGAGGCTAGTTACAACTTGCTTGGAACTAGTTACAACTTTCTAGTTACAACTTCCTTGGATGTGAGTAGTTCAGAGTTAAAGCTAAAACACCAAATACTGACTACCCCCCCCCCCCGCCAACCATGTGTCTCTGGGAACTTCGTTCGTGTTCAGGCCAACCTCATTCAGTACTTCTGGAATCTTCAAGGTCCTCAGACCTGGGAGTCGATCCCAGGATCGACTTGACAGAACTGGGTGCGTGTAGGGAGCGCTGGGTTCCTCTGGGCTCCGGAGATGCTGGCAACAACCCTAGGTGTGGGTGAGGGCAGCCCCTCGCCCAGCAGGCAGGTGGTGCCCAGGCCTCCCTGGCCTCTGGTGGTGCCAAGTGGAGCACGTTCTGGAGACCCCATCTCAGCCTCTGTGCCTTTCGCGTCCAGTCCTCGGGGTCCTTTCGGAATTGCATCAGGCTGCGTTGTTGGAAGGAAGCTGGCCCTCTGCCCTAGAAGCTGCTTCTGCTCCTTGGCTCCCACGGACGGCCCCGTGCAGGAACCACTGGGTTCTGGCTGGGGGCTCCTTCCAGGCCCTGAGCACATCTGTCCACAGCACCTCTCTGTCAGTCAGGCGCTGACCGTGACCGCCAGCCAACCTGGGGGTTTTGCTCTCACAGTCACTCGTCGAGAATGTTGAGTGTTAACGGAACGAGACTGTTTTCAGGAAGGAACTGGAGCTGGCATTGTGTCTTTGTGAAATGCGTGTGAAGACTCGGAGGCCGGGTGCCGGAGCGCTCATTGTGGTGGTTTGTAACGTGGGGGAGTGGTGTCACCTGGAGCCGTGCACGCAGGACTCAGGCTCTGCCGCCTCGAAGATGTAGGTTTTGGCTCTGACTTTTCCAAGCCAGGTATTGAGTTGAGCAGATTTCTTGGCTGATGGTCCAGTTAAAAGCCACCCTTCTCTGTCAGTGGATGGTTTTAAGTAGGGGAAATGACCCAATGTTATTTAAACTTAAAAGGCCTTCTTGGTGGCCATTCTTGGTCCTTCCCTCTCCCCTCACTCTCCCTCCTGAAAGGCAGAGGCGCCAGCCGGCATGGGGGCTGGACAGCAATGACTTTGGGTTCCTCTTCAAAGCCGGATACACATGTGACTAGAATCCTGGGAAGTCTGCAGTTTAGCACTAACTGAAAGTTGCCTCCTGAGTTTGATCGTGGATTTTAAATGTAGTTGTTCAAGATATCAACTCATGTTTTGTAATTATAGAGGCAAATGAGTTTTTACTTTTTAAAGAGTTTTAAGGGAATAATTGTGAGTTTCTGTGCAGCAAAGTGGCTAATTACTCATTAAACATAAGAATGTAGTGTCTAAATCCAGATTTTTTCTTACCTCTGGTACACTTTAGATTGCTTACCTAGTATGTATTGAGGGGTTTTTGACCCTGAGTTTTATCAACTTTTCTAGTTTTATTTTATTTTTATAAAATAATTGAAAAAACCAAAAATGAATTCAAAAGTTCCATAGGTAGATCTTTCCCCTTAATTTCCCCCCATGCAAAAAAAAAAAAAAAAAAAATTTTAGAAAGACATTTTGAATCAAAATGTATTATGACCATGTAAAGTTTACTGTTTTCTAAGAAGCTGAGCAGCTAAAGGGCCTCATTCCAGGTGGTACTGTGTGTGCCGTCTGCGAACGCGGTTGCCTGTGTGGTGGGTCCACGTGGCAGTGTCTGTGCTTGGTGTAGAGACCGTGCAGTGCTGTTGTGTAAATGGACAGTTCCTGTATAAATTAGTGTTTATATGCATTGGCCTCTGTATAACTTTTCATTTGCTACATGAATTGTAAAATTAAATATGAAATTATAATACCTGCTAAATACGATTCTGAGGCTTCCTGTCCTTGTCTTTTAGTTTAATACCATTCTGTGTGTTTTGAGGATGTTCCATGCTTGCATGATGCTAGGTGGTAACGCCACTTTAAATTAAGCCTTAATCAGATATTAAATTTGTAAGTTTCAGAGTATGCAAAAATACTAGGCAGAATGAGTTTAAACTGTTCAGATCAAGATGCTATATCTTAATTCAGCAAGTCTTTTCTCCGGAGTTACAAAGGGAAACTTTCACTGATACAGCGCTCGCTCGCTCTCTGGTCTGGCTGCTGCCATTGCTTGATGAAAATGGACCATTGTGCATTTCTGTGGCAGTCAGTCAAAGACCTGTTCTGAAAGTCTTGAGACTTTGTCAGGGTTATTTTTAAATGTTTGATTTTTTTTTTTTTTTTTTCCCTCCAGTTTGAGATGTTTTTATGGCTGATGGAGAGTATGATTTGGGTATAAATCTTTGCAGACCTGCTCATGTTCTAAGCTTTCTTCAGGTAGTGCCACCTGTCATTGTTTCTGCTTACGATTAAATGGGTTTTTGTTTTTGTAAAAGCATCTTAAATTTAGACATAAAATGGAGGGGACCCAGCTTTCTTTACAATGTGGATCTACCTCAGTTAAACAGTTGGGTGCTATTTACTAAGCCTGTCAAACTAAATTGGAAAAAGTAACAAAACAGTGAAATATATAACTCCACACAAAGCTTGAAAACATAATTTCCGTTTATTTAATAATATTTTTATTTATTTTGTGCCTTTCGTGTTTAATCCTAATACATTGAAAAAATCAGTATGAAATTAAATATTTTATATTGTACATGGGGAGAAAAAGCCCAATTGGCCATGGAATCTGAGAGATCACCCCAGCTAACTACTAACACATATTGGAATCCCAACTGCCCTCTTGTGAAAAGAAAAAAATTATGCCCAAGAGCAAATATGACGTTTTACAAGCAAATTTCAGACTCTTCTATGCATATATTTGTAGCTATCACTTCATTTTCTGTGCCAATGAAGGGGCGGCCAAAACAACTCACACACTCTTGTCCTTGCTTCTCTCATCGCGCAGGCCCCCACCCCCGCCCCGGGCGTATTTTATAAGTTCATTTCATAAGCAACGGATGGACTGTTGTCGACTGAGTCTCTCCCGACCTCCTGGTGGGGGTGCTGATAGCCATCGACCGAGGAAGGGAGAGCCCTTGGCTGTGGGGGAGGGGAGCAGGGGTGCTGTGCAGCACCCCAGGATTTCTGTGAGTTAGGAAAGCTTTCTGGCAGGTGAGAAAATAAGATAGGAGATCGATGACTTTCCATGCTTTTATATTTGGCAGTTTACAAGTCTAGACTTTTCCTACTATGGCAATCTTTTTTAATTCTTTGGAGGTAACACAATATTTTGGAGTCTTAAGAATTTGATTTTATACCAATAAGAAATAAAAATTAGGGATCTTTCCTGTAGTATATAGTTTTACTATTTTAAAGAGATCTCTGAATTTTACAAGAGAACCAACATTCCTTAGTGGCAAAACTCTGAAGGTTGATTTGGGAGGCTTTTTGCTGCAGGATCTCAAAAAAACTGGGATGATTCTAGTTAAATGTTTTTTAATTTTTAAACTTCCATCAGGTCAATACGTAAGCTATATTTTGTAAAGAGTAAATCATCCTTTAGTATGCTGCATGTAAAGATCAGCGTTGTTGCACTTTCTCAATAATAATAAATGCCCTACAATTGGCTCATCAGTAAGCATTTTGTTTTTTACCTAACAAGAGTACTTTGGGGCAGGTGATTAAATTTATATAGGTACCTCAAGAAAAAGAACCTGAATATGCTGCATTTTGTTTCTTTAGCTTGTATATGTAGCATTTTGTTCTGCTCTTATTTTTTTGTTTAGATATATGCTTTTTGGACCCCAACAGGCTGTTGAAGAGATCTTAAAGTTACTCTTGTAGGGTTACAGTATCTACAGTATCCTTTTTTTTTTTTTTTAACTTACTGCAATATCTGGTTCAAAGGTTGCCCACCAGGAGATTAATACTTTACCCCAATACACCTGAGAAAAAGGATACCATGTTTATAAGCAGACAATAATGTTTCTAATCCTTTCTGTTCATGCTGCTTTCTTACTTTTCTCCATATCACCAAGAGGTTGGATGACTTACTTCTAAGGTCAGACTTAAACATCATGGCATCTTAATGTTTTCAACACAGACCTCACAAACTCGCCATTGAGTAAAGTAGCATGACCCTAAAGGTGTTGCTGGCGCTAAGCAGCCGCGTCCATCCGGGCTCTGAAGAGCCGGTCTCGACACTTCTGTGTTCCCAGCACTCACCCTAAACTGAACAGACGGGGAGTGGTCTTAATTGACAAAGACTAAACTGGTGAAGAAAGCTAAAGGCTGAGACACTGAGCATCTATGGTGGTGTTTAAGCTTAGCTGGGTCCTTTCGAGTTTGTTTTACAGCTTACTAGGTTAAGTAGTTTGCACTATTTTTGCAATAAATCCATGGAAAACCTAACAGTTATTTGTTTTGTTTCTTATTGTGTGTATATAAACTAATACTAAAAAGTTTGGCATAGTGTTTTTTTCACCTTACATAACCTTTAACATGCACAGAATGCTGTAAATCTGATAAAATATGATGTGAATGATATTTTATAAAGTTATTTTGTATGGTGTCAATTTTGTTTTGCCTCATACTATGTCAGCAAAAAAAAAAAAAATAAAATTCCTTGTATTTACAGCTGCCTCTCCCAAAGACCTTCTGTTACTCATGTGTTTATTTGGGGGTTTCCATCCACACAGGTTAAGATTCCAGGCCTCTGAGGTAGAAGCACCCCTTGGGTGACACAAGTCTAGGGCCTTATTTTATACGTTGGGCCCCTTGAGAACTGGGAGTCTGGGGATAAACCTAGGATTGAACCGGATGGAACAAATGTGGTATCCAGGATGAGGTGGGTGTTCCTCCTCTAGCAGCCGTGAGAAAGGGTGAAGTGAAAAGTCATTCAGCTAAACCCCAGTCAAGTGTGAACCCCTGAGCTCCATGCTGTGTGGGATACAGCTGACCGCATCTGGGGCCTGAGCCTGGTGGGTCACTCACCCTCTGCTCGGTGGCCTCCCTCTGGGCTGTCTGACTTCTGTCTGTACTGGAGAGAATATGTCGTGTTGAGAGATAAGGAAGGTAGGAATAAGAAAACAGGAAACTAGCTGAGAATCCCTAGGACAGACACTGAGCTAAAGCAGGCCAAAGTTTGTGTTTTAAAGCTATTTTTTTATTTTTAAGAACAATTAAATAATATGCGTTCACTATAGAG EMBV3_22429 TAACCTTCACCTGGAGTCACTGGTTGTTAGCCTCGTGCCTATGTGCTTTCAATTGTACGG Gene BVT0102_131421 + 0 NULL GK000008.2:52850732-52957790 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225324 TCONS_00225316 TCONS_00225328 TCONS_00225315 TCONS_00225330 TCONS_00225318 TCONS_00225322 TCONS_00225317 TCONS_00225326 1 XLOC_137722 Coding TCONS_00225322 XLOC_137722 Coding Coding LOC100335747 8:52806676-52854177 j TSS168722 6469 1 TCONS_00225322_5 428 0.0423558509816046 5 0.863915789473684 1.51660001731587e-11 0.000976833378156109 2.0464871971329e-08 0.000890642616648656 2.43601656832063e-09 0.000247648201328849 0.000142350841469988 2.89069607096002e-19 0.000657914393769147 0.000310884102640434 0.000105641933705703 8.83214739679971e-05 5.77848143161102e-06 0.000126990672114552 6.68345688816889e-11 0.00349068120048919 0.00378999279536872 0.00439510305378341 6.41514251775443e-17 1.62609554519779e-05 6.16294912683166e-08 0.000229710159916942 0.000429789963212447 0.000997292996260332 6.56377320520411e-09 4.7289956332431e-05 2.70527025877967e-06 0.000201975673040749 0.000199244327492883 2.62407969222083e-08 XM_005210035.1 GCNT1 PREDICTED: Bos taurus glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), transcript variant X1, mRNA. 0.0 8825 100.00 0.756221981759159 NM_001097634.1 GCNT1 Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), 0.0 2150 71.37 0.635956098315041 TCONS_00225322_5 sp|Q92180|GCNT1_BOVIN GCNT1_BOVIN Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase; 0.0 889 99.53 0.997663551401869 1 coding 1 1 1 1 -0.00581773513396178 0.964687839015878 0.00208107419047897 0.970550529987031 GGGTGGGCGGCCCGAGGCCCGGCCGCGCGGTCCTCCGGCGCCAAGAGCTCAGTCAGCCTAGCGCGGAGCAGCGCCGGGCGAGAGCGTCCCCGTGCTGCCCAGCACCCTCCAGCGTCTTCCGGGCCAGGCGCTCGCTGCAGCTCTGTTTCTGGATACCGAGCAAAACACAGGCACCCCAGCCTGCTACCCACTTCTCATCTTTCTCGGTGGATGATAGGTCGCCCGTGCATCGAGGCTGGGCCTTGCGGGCTGCCCGGTTGGAGTGGGACTTCCCTACCATTCTGTGCTCTCTTGACCCTCAACTCAGTCAAAACTCAGCCTTCTCGCACCTGGTCCTGTCCATCATCCATCTGCTGAAGAACAGCAGAATGCTGTATCACTCAGACTCACGGGACATAACACCACTGCTGGATGCCTGGTACATTTAAGAAACCTGACTGCATAAGAAGCGCTCTACATGGGCACAGGATGTTACCTGGAATCAGAACTAAATGATCCTGACTTTTCTTGATTTTAAATGTGCTATCGTCCATTTCAAGATGCCTTTGCACTTTTGATAAATGCAAACTGACAAATCTCCAGACCACGACAGAGAGGAAATCAGTACTGCTTGAAGCCTGAAAGACTACCCTTAATAAAGCCAAGTCCCCAATTGTTGAAATGCTGAGGAAGTTGTGGAGGAGGAAACTTTTTTCTTTTCCCACTAAATACTACTTCTTATTTCTTGCTTTTTCGGTGGTCACATTCACTGTTTTAAGAATTCATCAAAAGACTGAATTTGTAAATTTTGGACATTTGGAGCTGTTTGAAGAGAATCCTAGTAGTAATATTAATTGCACCAAAATTCTACAGGGTGATGTAGATGAAATCCAAAAGGTAAAGCTTGAGAGTCTAACAGTGAAATTTAAAAAGCGCGCTCGATGGACAAACTATGACTACATAAACATGACTGGTGATTGTGCTTCTTTCATTAAGAAGCGCAAATATATTACAGAACCACTTAGTAAAGAAGAGGCGGGATTTCCAATAGCATATTCTATAGTGGTTCATCACAAAATTGAAATGCTTGACAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGTATTCACGTGGATGCAAAATCAGAGAAATCCTTTTTGGCTGCAGCTGTTGGCATCGCATCCTGCTTCAGTAATGTCTTTGTCGCCAGTCAGCTGGAGAGCGTGGTGTATGCGTCCTGGAGCCGGGTTCAGGCTGACCTTAACTGCATGCAGGACCTCTACCAGATGAATGCAGGCTGGAAGTACCTGATAAACCTCTGCGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGAAGCTCAAGCTATTGATGGGCGAGAACAACCTAGAAACAGAGAAAATGCCATCCCATAAGAAAGAAAGGTGGAAAAAGCATTATGAAGTCGTGAATGGAAAGCTGACAAACATGGGGACTGACAAAATACATCCACCTCTTGAAACACCTCTGTTTTCAGGCAGTGCCTATTTTGTGGTCAGTAGGGAATATGTGGAGTACGTGCTCCAGAACCAAAATATACAAAAGTTTATGGAGTGGGCAAAAGACACATACAGCCCAGACGAGTATCTCTGGGCCACTATTCAGAGGATCCCCGAAGTCCCAGGGTCATTGTCCTTAAGCTATAAGTATGACACGTCCGACATGCAAGCGATTGCCAGGTTTGTTAAATGGCAGTACTTTGAAGGAGACGTTTCCAAGGGCGCCCCCTACCCGCCGTGCAGCGGCGTCCACGTTCGCTCTGTGTGCGTTTTCGGAGCTGGTGACTTGAACTGGCTGTTGCACGTGCACCACTTGTTTGCCAACAAATTCGACACGGACATTGACCTCTTTGCCATCCAGTGTTTGGACGAGCATCTAAGGCATAAAGCCCTGGAGACGTTAAAACCCTGAATGTTGTAGGCAGTTTTAGAAATATTAATAAGGAGGCAGGAGATCTACCCCCATTTGATTCTTCCGCCTCCAGAATCCAACTGGATTCTTCAAGCCAGAGAAGCTGCATGGTTTCTGCAGAGCAGAGTCAGTTAGAAAGGCTGTATCCTTAAGCCTGGACTTAGAGTTAATGAGAGGCTCGGGCAGGTTGCAAGGCATTGTAGGGGAAGGTAGCTGGAGAAGAGGCTGAAGGCAAGCTAGCCTTTTAAAGAGCTCAGGGACTTTAAACTCAGAATTCTAAGATTTGACTTGTGCCAAAATTACTTGGAGAGCTTTAAATATGAGGGATTTTCCTGATTTGAATAGATTTATAGCAATAACTCAATCGGGATATAATTTATCTTGTAGATTATGTTTGTTGAAAAAGAAATTTGACTGTATTCTAAATGATCTTTTTAAATGATTGACTTTCTGCTGTTACTTTGAGCTATGTTGTGTATCTATATATGCCATCTCAGGGAACTTGAAAAAACGGGCTTGACTGAATGTGAATATTTCTCATTTTTGCTTTTAACAATGTATATGTGTTTTTAAAAGAAAAAGCAGTTTCTAGTTGATTCTGTGAATCAGGTTACTTAAGAAGTTAAGGTATCTTGGGTTGTTATAGTGTCTACAGAGTAACACTCAATTTTTTCAAATGTCTCTCTTCTCCTCCAGTCTCCCCACACCCTGCTATCCAGCTGTATATAAACTAGTTTTCATAGTGACCCATATTACAGCCTCAGTTCTCTTATGTTTGGTAGTAATTGGCCTGTAGAACTAAGAAAGGGTGAAGAGTCATATGTAGACAATTTCTAATGAGTGTTAAAAAGCACCAGTCTGTACTATCCCCAGAAATTAAGGATATTGCTCTTTGGATCAGCTTGTGTTCATGCTCCAGACTCTTGCATCCAGCCGCCACTCTGTCACCCTTTGAAAGGAACTGGCTTCCCCACTGCTTGTTTCTTCAAGTTACCGGCCCACTGGGTAGTCCTTAGCTTTTGCATTGTAAGTTCCCTTCTCTCTCAGAACCTATGAGGAGGGGAAAGATGTCTGTTGTACCACCTAGTGTGCTTGAAGGCCTGGGAATCCTAAAGAGGAGCATTAGGTTTGAGACAGATTGTCTCAGTGTTGATATTTTTAGCATATAGTTTTTACTCTACTTTTCACCAAAAGATAGATTTGTGGTTGCTATTGCTATCTCATTTCTAAAAGTAAATGAAGATTTTTTTAAAAGCACCAACTTGGACTTTTTCTAAGGTGATAGCATTCAGCCAAAGATCTAATAGGACATAGGAAGTTTTTATCATTACCTGAGATGTCAAAAAAGAATTAAATTCATGAACTTTATTGTTAAAACTTAGCCAACTTAAATAGTATATGGGAAGTTCATAATATCACACAGTGTTCAGGCATTCAGCTGAGAAAACATTTTGTTCCATAGAGTTAGGAAACAGTTTTATCTTACGGAGAGATTTGTTATACCAACCCTCCTGAATGAAAGTTTCACACTTTGGGAGACTATCATTTGTAAACATGCAAGTCAGTGGATTGCTATGGTTTGCATGATTTAACATGGCAGCCAGTGTTGGACCAAGAAAAATATACCCACATTGAAAATTCAAGACGTGATGTCAATGAGGGCGTTATATGCATAGCATTCTGTCTCTGTTGACTTCTAAACCATCTTGTTCTTTTAATGCATGTTGCGTGTCTCTCTCATGCTCTCTTTTAGAAGAAAAGTTTTACCTGTAAGTTAGGCCTTTAAAAAAAAACTCTACAACTCGTGATTTTCAGTGACATACTTCATGTCTCTGTCTTGTGTTTTCTTAACTTCACTCGTGGTGTCTTGACTACTATAGACCTTTTCACTTTTTATTTGGAATATTTGCAAAGTTACAGGAAAGCTAAAAGTAATGGTACAGTGAACATTATATAACCTTCACCTGGAGTCACTGGTTGTTAGCCTCGTGCCTATGTGCTTTCAATTGTATGGATTTTTTAATTTAACAAAATTGAAAATTGAAAGTTAAAGTTTATAAATATCTAAAGTTTTTATTCAGAGCAATGCTCTTATTGTAGTGTGACTAAATCTTGTTAATGTTTAAATTGGCAGCTTTGAGGGGTTTTTTCCTCCCCATAGACATAAAAACAATGATTTTAGAATCCATTTCCCCAAGCCCCACACTAAAACTTTGGACCCACCGTCTTTTATGAAACTGTGGTACCTTTTCTTTCTAGAAAGTTTACTTAAATGTGTCTGAATATTACCCTATTGCTAATAGCTTTACAGGGATTATATAGCCATTAGGACTCTTCATTTTATGCTTTTCAACATAACTTAAATGAAATTCATACTAGTGGGACAAAGAACTGGAAGAGTCAAGAAGATGGTTTCAAAAGGAAACCCATACTACATTCAGGAGGAGCAGAAATGTAAGTTCTTTGGCAAATATAAATTACTTAAACTTCTATATGTCAGTTATTAAACACTAATTTCTTTTACTGTCATTTAAGGTCTTTTATAGGGAATTATTAGAAATTGTGTTCCCAAATCCTTAAGTGTACAGAAACTGCAGTTTTTTAAATGGAAGTATTCTAGTTAATGAAGTGCTGATCAAGATTCATGTTAAGAATAAGAGTTAACAAAAATGGTTCTTCCTTGACAGGCGATTACCTAGGCTTTTCTCAGAGCATGGTAACCCACCACTCAGCCTTGAAAATCTACTACTATTGTCTCTAAACATGTGTTGATATTTGTGTCATTCAAGTACAATTTACTTAAATGAAAGAACATACATGGATTTTCCTTTGTAGTCATTTGGTGGAGGAGGAAGGCATGTTTTACTTCATTTCACCAGTAGAGTAAACTGACCTGAACTTTTTTAGTTGGCTTAGAAAAGTAAAAATCATTTCTCATTATGGTAAAAATAAATCAGTAAATGCAAGACTTTCATGACATGTGTGGTTACTGTGGGTTTTACTCTTTTGAATATGAGTATGACTGAATGCATTTGGAAGTAGTCATATCACCATTAAAATCAGCTATTCAGAAACTAGTGCCTTGTCTCCACAAGTTAGTCTTATTTTGTTAGCTACATAAGTTACTACTTTTTTGTTAGCTACAAGCACTCCAATATTAAATTTAGTAGTTGGATCTGATAGTTTGTAACCAACAAGGGTTTTGTGTGAGTAGTTATTCAAAACATAAAAATTTATTCTTTAGGCAGAAATGTCTGAGAGAGAGGGTATTGTCATGGTAAAAAGTGTAACACAGTTTATGCCAAAAGAGCTAGACAGGGAACTTTAGAAGAATGCAGTTTAATAGCCAGTGTTACTTTCTGGGCGTCACTAGCTTCAGCTTATATCTGCTGAGAAAGCTTAGGTCTGCTGAGGAACAGTGACCGTAGATACTAACAGGTTGTTACATGCGGTCTGAATGTGGAGAGCACACCAGAGGGAAAAGGGAAGTAACCCCCCTCCCCAAGTATTGAGTGCCAGCTCCAGATGTCTCCTCACCTGATCTGGTAAACCCTTCTGTGTGCTGTTCATGAATGTCCCTCAGTCATGTCTGACTCTTGGTGACCCCAGGAACTGTAGCCCACCAGGCTTCTCTGCCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGTCATTCCCTTCTCCAGGGGATCTTCCTGACGCCGGAATCGAACTCTGGGTCTTCCTGCATTGTAGGCAGATTCTTTACCGTCTGAGCCACCAGGCTGACTGGGTGCTCTTTAGCCCCATTTTATTTTATTTATTTAATTGGAGTGTAATTTCTTTACAGTGGTTGTGTTAGTTTCTGCTGTACAATGAAGTGAATCAGCTATATGTATACATAATTTTTAGCCTTGTTTTAGATGAAACAGACTCTACAATGTAGCACAGTTGATTAACCTCAGCTCTTTCTTGAAAGCTTGAGAGCGTTATGTATCCTTTTTAAGTCTGCTTGTCAAGGATTTAATTTTAATATATGCTTAAAGTTCTCAGAGCTTGTCATCAGAATATTGATTTACTATTTTTCAGTGTAATAAAAGCCAAACTAGAAATGAGTTATAAGTATTGGGAAAGAAAAGGCTGTTTTCATTAGTGCAGATGATAGTCCAAGTTGAATGCTCGGGAATCTGGACTTGAAATTAATAAGACATTAGCAAATTTCGCCACACATGCAAAAACCAGTTTTTCCATATTCAAGCAAAAAAAAAAAAAAGTTGTTTTAAGATGTTAGGGGAATAGGTTATCTTTGATCATGGCAAGAAGCTCTGTAAAATGTATAGACAAACTTAAGATATGTGTGGGACCTGATGAATAAAATACTTCAGTAGATTAAAAAAATTTTTGCTCCTAGCTGGTAAATATTTTAAATATGACCCTTCTGCCCAGATTAATCCATCCTTCAAATATAAGTGCAATGTCATATTCTCAAAGGGTTGGTAAAATTGTTCTAAAGTTCATCCAGAAGGAAAAAAGTGCAAG EMBV3_07819 TCACCAACCGCATTGCTGAAACCGCGGATGCGAAAAATAAGATTCAGACTCACCTGGCAA Gene GeneID:522915|TEKT3:NM_001099019:51_cdna Constitutive 0 NULL GeneID:522915 19 GENE TEKT3 MGC165705 tektin 3 EMBV3_43665 CGACTTATGGAATCCAAAGTTGAGCTTAACGGGAATGTGACCCTGAAGGAGCTGAATGCC Variant GeneID:517171|SAR1A:NM_001034521:320_cdna 463^594 2 EMBV3_42752 GeneID:517171 28 GENE SAR1A MGC127517 SAR1 homolog A (S. cerevisiae) EMBV3_14690 CTGTAGAAACAGAGAACACCCGGGAGAAAAAGGAGGCGGAGGGTAGAGAGCCCTTAGAAA Gene GeneID:534664|C16H1ORF55:NM_001099065:71_cdna Constitutive 0 NULL GeneID:534664 16 GENE C16H1ORF55 MGC152505 chromosome 1 open reading frame 55 ortholog EMBV3_19088 AACTGTGGGGGCACTTCCGTTTTACGAAGGGAAGTGCCGCCATGTTTTGAGTGTTACCGG Gene GeneID:100313040|MIR292:NR_031316:51_cdna Constitutive 0 NULL GeneID:100313040 18 GENE MIR292 bta-mir-292 microRNA mir-292 EMBV3_14959 TCTCCGTCTCTCTTGCCTCACCGTCCTCATTGGAGGGCCGTGGCCTGAATTACTTTTTAA Gene GeneID:508666|LOC508666:XM_002695626:29_cdna Constitutive 0 NULL GeneID:508666 19 GENE LOC508666 NULL similar to C-C motif chemokine 23 precursor (Small-inducible cytokine A23) (Macrophage inflammatory protein 3) (MIP-3) (Myeloid progenitor inhibitory factor 1) (MPIF-1) (CK-beta-8) (CKB-8) EMBV3_22972 TCTAGTTCTAGGTCCAGAGAAAGTGCCGGAAGAAGCAGCGGATCAAAGTGCAGATCTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33252 ACCACTTGCACACTTGGCTGCAGAACACCGGAGAGCAATGAGGCCCATCTGTCAATCAAA Gene BVT0102_226412 + 0 NULL GK000004.2:65285756-65489393 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09582 TGTCGAAGGTCAAACACGAGGCCCTGAGAACCACACAGCACATGGCCAGGCTTTCATTAA Gene BVT0102_032397 - 0 NULL GK000029.2:28918089-29178387 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00644 CAGACCTTGTGGTCCTCTCTGGATTGCACATGATGGAGGGACAGAGCAAGGAGTTCCAGA Gene GeneID:518158|ADPGK:NM_001082438:164_cdna UTR3_Alt 2 NULL GeneID:518158 10 GENE ADPGK ADP-GK MGC148410 ADP-dependent glucokinase EMBV3_41510 CCAGCCCACAAACAGGGCCCCAAGCACTTCATCTTCAGCCACCACCCACAGATGATGCCA Gene GeneID:517311|IQSEC2:XM_002700128:66_cdna Constitutive 0 NULL GeneID:517311 X GENE IQSEC2 NULL IQ motif and Sec7 domain 2 EMBV3_10392 AACGTATTGAAGGACTTATTGAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAG Gene GeneID:534325|CUL3:XM_002685633:323_cdna Constitutive 0 NULL GeneID:534325 2 GENE CUL3 NULL cullin 3 EMBV3_14969 GCGGCAGAGCCACGCGTGACAACATGTCACTCCGCTAATTGAATTTCTTGATTGACTCAA Gene BVV0102_033403 + 0 NULL GK000005.2:119591233-119672822 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43077 ATTGAGATTGACATTGAACCCACGGACAAGGAATGATGAGAAGACAGCAGCTGATTACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00039 TACCCTAGACCGAGGACCAGATGGCTTAGGCTTCAGTATAGTAGGAGGATATGGCAGTCC Gene GeneID:536863|MPDZ:XM_002689585:17_cdna UTR3_Alt 2 NULL GeneID:536863 8 GENE MPDZ NULL multiple PDZ domain protein EMBV3_41909 TGAGGCTTTAAAACTTGGCTATTAACCCACGAAAACTGTCGACCCTCCTTGGTCCGTCGG Gene BVT0102_094649 + 0 NULL GK000023.2:42974756-43001107 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00137790 1 XLOC_084000 NonCoding TCONS_00137790 XLOC_084000 NonCoding NonCoding - 23:42992787-42994308 - TSS103080 1521 1 TCONS_00137790_4 102 0.132807363576594 1 0 0.000214685400372991 0.00029068351336337 0.000249450558287265 5.45966162071322e-06 0.000519361368552389 0 2.30047479001589e-05 0 5.18747031644541e-06 0 0 0 1.88644549953869e-06 9.27809861039907e-06 0 0 0 0 0 9.4561940478997e-06 0.000177632776923462 0 0 0 8.65489205258415e-05 0.000296456729862571 0.000169495285498193 0 0 0 XR_229433.1 LOC101908653 PREDICTED: Bos taurus uncharacterized LOC101908653 (LOC101908653), 3e-66 257 78.16 0.204470742932281 0 noncoding 0 0 0 0 -0.189678374022664 0.122055622037567 0.0160360926792925 0.787632784266068 AGTTGGATCCACTTGAATTTATTTCCTATAAGATATGGAAGGTAATAATACCAATTGCTTCCTTTTTTAAAGATACTAGTTATTGGCCATAGGATGCATACAGCTCTCAGAACATGAGGCACTCAATGCATTTAGCTATGATTCTTTTTACTTGAAGGAGTAAAGAGGTCTTTGTTGCCTTCCTCAATCTTTCCATTGACACGAAGATAGATCTGTGGTCTACCTGACAAGCGGGGGTCCATCTTGCCTTCCCCAGCCCCTGGAAAGCCAGACCTTGGTGGAAACCCAGCAGAATCCCAACAGCTGCTTAGGCATGAAGTTCCCCTCAGCTGAGTGAAAAGTATCCCAACTGCCTCCTCTTGCTGCCCTCTGCTGTTTCTACTGAGAATTGCACCGAGCAGAGTTTTCACTGCAGGAGACGAGCAACACCTCACCTCAAGTAGGGGGGAGTTGTCCTTCTGTACCTTGTGCAGGATTTGATTGAATGTCCTAAAGTTTGTTCTTCATGGTGCCTTTAACCTCATAGCTTTGCATTTTCATATGGAATGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCGGGCTATAGTCCTTGGGGTTTCAAAGAGTTGGACAAGACTGAAGCGACTTAGCACGCACGCATAGAGTCTATAACTGCTTCTGGACTTTCCATCAAATGCAGACTTGTGCTGCCTCAAGCTCTGCCCATTTTCAAGCAAGGTGACCAGTTGGCCAACCTGCTCTTGGCTGACCCTCTCATTTCGCTTCTTCATGCCCCCGCATCCCACGTTTGCTCTCAAGCCCCAGGCTAGCTGTGGCCTCTCCGATCCTCTCAGCTGCTCTGCACCTCCAGAGAGAGGCCCTCCTGCCTCCAACTCTCTCCCTCTCCAGGTCTCTGACACCCATGGTTACCAAGTCTTTCTCATCTGGTCACCACTCCACCGGCCACACGTGGTTCCAGCTCTCGGACCTTCTCCATCTGACCCTTCCTGCCCTCAAGCTATATCTCTTGTGACACCCACACAGCTACCTCAGGTGTTAAGTCCTGCCCCCAAGGCCACCTCTGAAGCTGACTTCTGAAGCTGACCCTTTGTACCCGCTGCCAAAGACCCCTGATCATTACAAACTTCCCGACCCCCAATTAGGCAAAGACACCCACTCCCACAAACATTCTATAGTGCCCGAACCAATCAATCACCTAACGCCAACCTTCCAGCAGGAATTTTATTTGTCTTGAGGCTTTAAAACTTGGCTATTAACCCACGAAAACTGTCGACCCTCCTTGGTCCGTCGGGAGATTGGCTCACTGTGCTCGCAGTGCCCACGTTATCTCTGCTCTTTGTTCTTAATAAACTCACTCCCTTCTGAAATGCTCTGTATCTGGAAATTCTTTTCCAACCTGCACTGGGACTGACTCAACGTTAGGCCAGCTCCCATTCTCCACAGACACACCGTCATTTCCTTTGTGGTTAGTGGGTACTGTTTCGTCAAAAATACCCT TCONS_00133511 TCONS_00133512 . 5' 2209 TCONS_00133511 TCONS_00133512 . 5' 2209 EMBV3_11181 CCACTACCATCCTCTCCTATGTCTACATTGTTTCCACCATTCTGCATATACCCTCCACCG Gene GeneID:100337392|LOC100337392:XM_002685934:86_cdna Constitutive 0 NULL GeneID:100337392 3 GENE LOC100337392 NULL olfactory receptor MOR103-4-like EMBV3_14168 TAACCCTTGACAAAGAGCTAATGTCTTTACAGCCTGAAGTTGCCTTATTTTTGTGACAGG Gene GeneID:527214|PLA2G12A:NM_001098063:53_cdna Constitutive 2 NULL GeneID:527214 6 GENE PLA2G12A MGC155183 phospholipase A2, group XIIA EMBV3_00035 ACGACGTCACAGAAGGTGGCTCGGAAGTTCTGGTGGAAGAACGTGAAGATGATTGTCCTC Gene GeneID:507309|VAMP8:NM_001034290:47_cdna Constitutive 0 NULL GeneID:507309 11 GENE VAMP8 MGC127132 vesicle-associated membrane protein 8 (endobrevin) EMBV3_03755 GGATGCCAAATACGAACTTGTACTAGATGAGCAGGCAGAAGACTCAAAGGCAGGTCACTC Gene GeneID:535676|PPIL4:XM_002690318:11_cdna UTR3_Alt 2 NULL GeneID:535676 9 GENE PPIL4 NULL peptidylprolyl isomerase (cyclophilin)-like 4 EMBV3_35976 TATGAAAGAAATGGTGAAAATACAACCAAGGTCCAGCCTGATGACTGGAGGGGCCAAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36183 CAGCCCCGTGCAGCCCGAAGATGACGCCGATTATTACTGCTTTGTGGGTGACTTATTCTA Gene GeneID:615795|VPREB3:XM_002694690:279_cdna Constitutive 0 NULL GeneID:615795 17 GENE VPREB3 NULL pre-B lymphocyte 3 EMBV3_24227 TAAGGGCTATCAGGTGTTTAGACAATGTAGCGGGGACTGTCCCCTGTCACAACGAAGCAA Gene GeneID:524158|LOC524158:XM_002699454:8_cdna Constitutive 0 NULL GeneID:524158 X GENE LOC524158 NULL similar to 4932441K18Rik protein EMBV3_13997 TGAGAAAACACACCGCACACTGGCCGCTCCTCTGGGGCCAAACACCAGCTAAAAAAGTGA Gene BVV0102_171003 + 0 NULL GK000022.2:60229342-60249056 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14972 GAAAGATGACTGCTCTGCCTTAGGGCTGTTTTGAAGCATTTTTCTGGAATTTGGAGGTCC Gene BVV0101_011178 + 0 NULL GK000012.2:10501247-10667341 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13049 CCTGGCTTTGAAGATGAAGGAAAAAGCCGTAAGCCAAGGAATGCAAGCAGCCTCTAAAAA Gene BVT0102_206377 + 0 NULL GK000026.2:20862860-20885730 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27690 TGGCACAGGCGTCCGGGATTACATCCACGTCATGGAGAAGGCCTCTGGGAAGAAGATCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05280 GCAGTGTGTGGCGTCACACCCAGAAACCAGGGGCTCTGGTGAAAACAGATGAGCAGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38696 AATAATAGATATGGGCAGCTGGGAACAGGGGACAAAATGGACAGAGGGGAACCCACACAG Gene GeneID:512170|FBXO24:XM_002698131:495_cdna Constitutive 0 NULL GeneID:512170 25 GENE FBXO24 NULL F-box protein 24 EMBV3_07547 TCGTACCAGAACTTTTTAAGAAGATATGCAAACGCACCATCCTCGCCATTAACCATTAAT Gene GeneID:513967|ALDH3A2:NM_001101984:30_cdna Constitutive 3 NULL GeneID:513967 19 GENE ALDH3A2 MGC166026 aldehyde dehydrogenase 3 family, member A2 EMBV3_26688 GCGCTTGTCAGACGATCAGTCCCGGGTCCACCAACCACAAGGCAACTTACTGTATAAATT Gene GeneID:529124|FLI1:NM_001046298:5_cdna Constitutive 0 NULL GeneID:529124 29 GENE FLI1 MGC137447 Friend leukemia virus integration 1 EMBV3_07294 GTAGGACATCCGCTGCACCTTCACTACACAGTGAGCATCACCAGTTTTATCCCACGTTTC Gene GeneID:533134|MBTPS2:NM_001075981:70_cdna Constitutive 0 NULL GeneID:533134 X GENE MBTPS2 MGC139715 membrane-bound transcription factor peptidase, site 2 EMBV3_17513 CTGCTGAGAAGTTAATAGCGTGGACGAGCCCACAGAATATGGGGAAGAGAGAAGTGGACT Gene GeneID:786410|LOC786410:XM_002697851:595_cdna Constitutive 0 NULL GeneID:786410 24 GENE LOC786410 NULL similar to serpin peptidase inhibitor, clade B like EMBV3_34669 CTTAATGGATATCATCACATAGTACAACAGGAAGCTGCTTTAAAGAATAAAAAAGAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12759 GGTGAAGGGTTTTTCACTTATTGGGCCAATGTTTGCTGCTAAGTCTCCATATCCCTTACC Gene BVV0102_217434 + 1 EMBV3_39564 GK000004.2:107204171-107215636 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023551 TCONS_00156814 TCONS_00218607 TCONS_00204180 TCONS_00011558 TCONS_00141021 TCONS_00134878 TCONS_00099337 TCONS_00250272 TCONS_00138407 TCONS_00132405 TCONS_00199292 TCONS_00138406 TCONS_00229177 TCONS_00208740 TCONS_00180616 TCONS_00122163 TCONS_00066112 TCONS_00174930 TCONS_00206558 TCONS_00025023 TCONS_00151311 TCONS_00110358 TCONS_00022175 TCONS_00058128 TCONS_00167486 TCONS_00201274 TCONS_00196907 TCONS_00220245 TCONS_00056822 TCONS_00134877 TCONS_00068428 TCONS_00048752 TCONS_00229178 TCONS_00219194 TCONS_00091564 TCONS_00229179 TCONS_00254829 TCONS_00233406 TCONS_00057018 TCONS_00206611 TCONS_00025022 TCONS_00161056 TCONS_00118479 TCONS_00009827 TCONS_00120346 TCONS_00064874 TCONS_00091893 TCONS_00109280 TCONS_00235856 TCONS_00116161 TCONS_00089192 TCONS_00098489 TCONS_00252994 TCONS_00134876 TCONS_00174931 TCONS_00218367 TCONS_00002801 TCONS_00161103 TCONS_00100335 TCONS_00103962 TCONS_00202228 56 XLOC_014218 XLOC_095274 XLOC_131927 XLOC_124364 XLOC_007109 XLOC_085449 XLOC_081568 XLOC_059580 XLOC_153215 XLOC_084615 XLOC_080770 XLOC_120945 XLOC_084614 XLOC_138675 XLOC_127252 XLOC_110383 XLOC_073718 XLOC_040830 XLOC_104738 XLOC_125080 XLOC_014641 XLOC_092080 XLOC_066262 XLOC_012846 XLOC_035925 XLOC_102322 XLOC_122922 XLOC_118572 XLOC_133562 XLOC_034625 XLOC_041687 XLOC_028883 XLOC_132513 XLOC_056338 XLOC_157761 XLOC_142888 XLOC_034820 XLOC_125133 XLOC_097948 XLOC_072637 XLOC_005380 XLOC_073143 XLOC_039598 XLOC_056664 XLOC_065185 XLOC_144309 XLOC_070330 XLOC_053977 XLOC_058734 XLOC_155935 XLOC_131688 XLOC_000688 XLOC_097995 XLOC_060578 XLOC_062257 XLOC_123873 Coding TCONS_00202228 XLOC_123873 Coding Coding - 5:120444013-120446943 - TSS151796 2930 1 TCONS_00202228_5 108 0.587030716723549 1 0 0 0 4.51193807282056e-07 1.53124698529616e-05 4.51350556447599e-07 1.35648930029397e-07 3.64896452084213e-07 3.02801167352076e-06 2.44806646352149e-07 0.000360063316641411 0.000149035145164363 6.72244990699614e-05 1.80742614696385e-05 7.97070973358139e-05 6.32089007105745e-05 0.00491426063609358 0.00234775895230084 0.00446520372380663 0 7.00374804267823e-07 0 0.00213773049223533 0.0022650682339218 0.00316411906209754 2.36466464321e-06 1.0486721288567e-06 4.49934969116975e-07 0.000779639386527115 0.00103384209399571 0.000761273057170048 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-168 598 95.49 0.127645051194539 TCONS_00202228_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 9e-18 80.5 45.05 0.981481481481482 1 noncoding 1 1 1 1 -1.24075784477828 0.0930142068557468 -0.270010977295638 0.00151824258702245 GAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTATGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTTTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAGTTGGTGTAAGTAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAGGTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTGAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAGCTGTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTGCTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGTTCTTTCTCTCACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTTATTTCAGCCTCTTTTCTCCACTGAATTTCCTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAATTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATTCCCTGGATCCACCGGGGCTGGACCCCGGCAAGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTAAAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTCAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGCGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAGCTAAAAGCTTTATTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAAAACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCATCATGAGGCTGTGGGATAGCCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATATTTTCTGCCATTGACGAATGAAAGGAGGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGCCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCTCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAAGATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAAAATAAATAAATAAAAAGAGAAAAAAAAAAGTAAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAAAGAGAGGGAGGAGGGAAGAAAAAGAGAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAAGAGAAGGGTAGCGAAAAATGAAGGGGGAGAAAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGACTGTAAGAGACGCTGTGACCAGGTGCCCTGGCGAGCTCCCCCTCCCCACCACCCCCCCTGCGCAAACCTTAAAAAAAAAAAAAAAACCTTATCCACCACTTTCTGATTTAAGGCCATTGCTGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGTTTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGTGCTCCTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACTGTAAAGGGATTTAGCAACAATATTAACCCCTGATATGCCGGTTGCTCCGATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGTTTTTGCTTTTACCTTATCAGGCAGGAAAAAACTTGACTTCTCAAGCTAAGAGCCACAGAGCGTTTAGATCTAGTGATCCAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTT TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 179015 TCONS_00193744 TCONS_00193745 TCONS_00193747 TCONS_00193748 TCONS_00193749 TCONS_00193751 . 3' 181944 EMBV3_16591 TCAAGTGCAAAGAGCAGAGACTTGGGAAATGTCCATCACCTCCTTTTGGCTCCATGCTGC Gene GeneID:617105|EEF1E1:NM_001040599:8_cdna UTR3_Alt 2 NULL GeneID:617105 23 GENE EEF1E1 MGC128552 eukaryotic translation elongation factor 1 epsilon 1 EMBV3_32062 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04382 TGGATGAAGGGAAAATGCCGGTTGGTGTGCAAAAATGATGAAGACAGTGTCACACGCTGC Gene GeneID:100113474|DEFB119:NM_001102359:656_cdna Constitutive 0 NULL GeneID:100113474 13 GENE DEFB119 DEFB120 defensin, beta 119 EMBV3_25503 TAGCTGTACATTTGCCTTTTTATTGAACACGTGAAGTTGTACTGTGGCTCATGCAATAGC Gene BVT0101_005062 + 0 NULL GK000013.2:20290983-20336669 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042183 TCONS_00042185 TCONS_00042182 1 XLOC_025615 Coding TCONS_00042182 XLOC_025615 Coding Coding ITGB1 13:20248721-20292117 = TSS31462 3823 1 TCONS_00042182_6 798 16 0.912270998963014 0.00672537049516408 0.00183140599076934 0.0045119780655352 0.00124984427530464 0.00165374067948281 0.000807995205813731 9.2420594189479e-05 0.000575103069745042 0.00172966141012654 3.90021486501375e-08 0.000153295451577894 0.000136795798506679 0.000108212443365376 0.000498113864065659 0.000168017053552891 0.0292448946847276 0.0115101659628139 0.0195972257616368 0.00430381010836941 0.00281988339015746 0.00360031997837539 0.00629021313438985 0.00745706233303554 0.0146933555317297 0.00653794111851785 0.00390904379494965 0.00121705816668425 0.00110025166829489 0.000689942227118594 0.00155578376089261 XM_005214148.1 ITGB1 PREDICTED: Bos taurus integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), transcript 0.0 4697 99.81 0.684279361757782 NM_002211.3 ITGB1 Homo sapiens integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), transcript 0.0 4558 87.13 0.977243002877321 TCONS_00042182_6 sp|P53712|ITB1_BOVIN ITB1_BOVIN Integrin beta-1; 0.0 1643 100.00 0.99874686716792 4 coding 0 0 0 0 1.69104680794143 0.0209698973425229 -0.126873466920979 0.0464534635840916 GGCGCGGCTGACGCGGCCCGAGAGGAATGCGCTTCCGGAGGGCGAGTGCCGCGGCGGCGGCCTGAGGAGCGGGATCGCAGCGCCAGGGAGGCGGTGCCCCGGGGGTCGTTTCCTGCCGGGAGGCGGCCCCGCGCCGCCGAGTCTCCTCCTCCCGCCCGCGAGGAGGAGGAGCCGCCGCCGCCGCCGCCGCCGCGCCCGAGCCCGGGAGGCCACGCCAGCTCGGGACAGGCCGAGCGGGAACCGCGGAGCACAGGCCGAGTTGACCGAGCGGGCCGGACGCCGCGGGAGAAGATGAATTTACAACTGATTTTCTGGATCGGATTGATCAGTTCAGTTTGCTGTGTGTTTGGCCAAGCAGATGAAAACAGATGTTTGAAAGCAAATGCCAAATCATGTGGGGAGTGTATACAAGCAGGGCCAAATTGTGGATGGTGCACAAATTCAACATTTTTACAAGAAGGTATGCCTACATCTGCTCGATGTGATGATTTAGAAGCCTTAAAAAAGAAGGGCTGTCATCCAAATGACATTGAAAATCCTAGAGGCTCCAAAGATATAAAGAAAAATAAAAATGTAACGAATCGAAGCAAAGGAACAGCAGAGAAGCTGCAGCCAGAAGATATCACTCAAATCCAGCCACAGCAGTTGGTTCTGCAGTTACGATCAGGGGAGCCACAGACATTCACACTAAAATTCAAGCGGGCTGAAGACTATCCCATTGATCTCTACTACCTCATGGACCTCTCCTATTCCATGAAAGACGACTTGGAGAATGTGAAAAGTCTGGGAACAGATTTGATGAATGAAATGAGGAGGATCACTTCAGACTTCCGAATTGGGTTTGGTTCTTTCGTGGAGAAAACTGTGATGCCTTACATTAGCACAACACCAGCTAAACTCAGGAACCCTTGCACAAATGAACAGAACTGCACGAGCCCATTTAGCTACAAAAATGTGCTCAGCCTTACTGATAAAGGGGAAGTATTTAATGAACTTGTTGGTAAGCAGCGCATATCTGGAAATTTGGATTCACCAGAAGGTGGCTTTGATGCAATCATGCAAGTCGCAGTTTGTGGATCCCTGATTGGTTGGAGGAATGTGACACGGCTGCTGGTGTTTTCCACGGATGCTGGGTTTCACTTCGCTGGAGATGGGAAACTTGGTGGCATCGTTTTACCGAATGATGGACAGTGTCACCTGGAAAATGATGTGTACACAATGAGCCATTATTACGATTATCCTTCTATTGCTCACCTTGTCCAGAAACTAAGCGAAAATAACATTCAGACGATTTTTGCAGTTACTGAAGAATTTCAGCCTGTTTACAAGGAACTGAAAAATTTGATCCCTAAGTCAGCGGTAGGAACATTATCTGCAAATTCCAGCAATGTGATTCAGTTGATCATCGATGCGTACAATTCCCTTTCTTCAGAAGTCATTTTGGAAAACAGCAAATTGCCGGAAGGAGTAACAATAAATTACAAGTCTTACTGCAAGAATGGGGTGAATGGAACAGGGGAAAATGGGAGAAAATGCTCTAATATTTCCATTGGGGATGAGGTTCAGTTTGAAATTAGCATAACTGCAAATAAATGTCCAAATAAGAACTCTGAAACCATTAAAATTAAGCCTCTGGGCTTCACTGAGGAAGTGGAGATTATCCTTCAGTTCATCTGTGAATGTGAGTGCCAGGGTGAAGGCATCCCAGGAAGCCCCAAGTGCCACGACGGCAACGGGACCTTCGAGTGTGGGGCCTGCAGGTGCAACGAGGGACGTGTCGGGAGACACTGTGAATGTAGCACAGATGAGGTGAACAGCGAAGACATGGATGCCTACTGCAGGAAAGAAAACAGTTCAGAAATCTGTAGCAACAATGGAGAGTGTGTCTGTGGACAGTGTGTGTGTAGGAAGAGGGACAATACAAATGAAATTTATTCTGGCAAATTCTGCGAGTGTGATAATTTCAACTGTGATAGATCCAATGGCTTAATATGTGGAGGAAATGGTGTTTGCAAGTGTCGAGTGTGTGAGTGCAACCCTAACTACACCGGCAGCGCCTGTGACTGTTCTCTGGATACCACTTCCTGCATGGCCGTGAATGGACAGATCTGCAATGGCCGCGGCGTCTGCGAGTGTGGTGCCTGTAAGTGTACAGACCCCAAGTTCCAAGGGCCAACCTGTGAGATGTGTCAGACCTGCCTTGGAGTCTGTGCTGAGCATAAAGAATGTGTTCAGTGCCGAGCCTTCAATAAAGGAGAGAAGAAAGACACATGTGCTCAGGAATGTTCACATTTCAACATTACCAAGGTTGAAAATCGGGACAAATTGCCCCAGCCAGGCCAGGTGGATCCCTTGTCCCACTGTAAGGAGAAGGACGTTGACGACTGCTGGTTCTACTTCACATACTCCGTGAATGGGAACAATGAGGCCACTGTTCATGTTGTAGAGACTCCAGAGTGCCCCACTGGTCCAGACATTATTCCAATTGTAGCAGGTGTGGTTGCTGGAATTGTTCTTATTGGCCTTGCATTGCTGCTGATTTGGAAGCTTTTAATGATCATTCATGACAGAAGGGAATTTGCCAAATTTGAGAAGGAAAAAATGAATGCCAAATGGGACACGGGTGAAAATCCTATTTACAAGAGTGCTGTGACAACTGTTGTTAATCCGAAGTACGAGGGGAAATGAGCACTGCCTGTGTGTACCCACAGCACTGCAGGCAAAGTAGTAATTCCACAGTCACAGTAAGAGAGCTTCAGGGCAGTGTCACCATGGTTCTCTCATGGGCAGGTTCTGAAAATGTACAATATGTATAATTTGAAATTTTTTTTATTATTTTGAAAATAATGTTATAACCAATGCCAGGGACTGACAAAAGACTTGAGACAGGATGGTTATCCTTGTCATCTAAGGTCACAATGTGCCTTTTTGACCTTTTCTCCTGGACTAGTGAAATCCAGCTCTTACTGGATTAAGCAGTATTTCTAGAGTGATTGAAAGGCAGTAGTTAACGAGGATGATATAAGATTTTCTGTTAAGTGTTAAACTGATTTCTAGCTTTGCAGACATGTCATTTTTCAGTTATACAGAATCCAAAGTAATGTCCTTCTAGCTAGTTTAGAATCGTTTTAATGTATTATTTTGCTATTTGCCTGTTAGATATGACTGATGACATACCTGAAAGATGAGTATGCTAGGAGTTACAGGTGTAAAATAGTGAAATATTTGATCTGCAAAGGCCATGGGGAAAGTCAGAGCTAGGAAGGGAAAACATAGCTTTAAAACCTGTGTGCCATTTTAAGAGTTACTTAATTTTGGTAACTTTTATGCCTTCTCTTTGTAAATTCAAGTCTTGGGAAATTTTCTGCAAAAAGTCCTTGATTTAGCATTATCTACATAAAGGCCTTAATTTACATAGTATTTGCTAAATTGAGGACCTCCGGGTGAATTTTATTTTATTCATTTTCTTTTTAAAGCCTGGTGCTTTTTATCACCTCTTCTAATGTATTTGTTTGCAATTTGGGGTAAGACTTTTAAAAAATCAGTACTTTTTCATCGATGTTTTAGCTGTACATTTGCCTTTTTATTGAACACGTGAAGTTGTACTGTGGCTCATGCAATAGCTATCACTTAAGCATTTCTTACTTTCCATTAGTGCTATAACAGACCACTGTATATTTACTTCTCACTGAGTTTCCTGTTTTGTTTCATACTATTCACCTTCTTATTTTAAGTGCCTTTTAATTTTAACAGTTCACTTTTTACAATGCTGTTTTAGTGAAGTTATTTATTAAATAAAGATGCTTAAAATATTTAAATCAGA EMBV3_28188 GCCTGGTAGTTCAGCTGCACTGCAAATATGGGTCCTGGTGGAGGCTGTTCTGCCTTTCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14262 GGTGACAGCGGATTTCATCAACCGGGGAGAATATGAGATTGACATTGCAGGACACCGGTT Gene GeneID:286844|PDPR:NM_174781:64_cdna Constitutive 0 NULL GeneID:286844 18 GENE PDPR NULL pyruvate dehydrogenase phosphatase regulatory subunit EMBV3_35055 ATGGCAGCTTGCCTATCCAAGGGCCGTGGTGTTATTTAGGAGGATTCGATGGTAACTTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07040 GAACCCGGTCGGGGAAGAGGGGCGCCGCAGGAGCTCTGGGGCCCCAGGAACATGGACACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30277 TGCTGGCCATGTCCACACCTCAAATTTCTCACATTGTTAAACAGCTTGGTATTGTGACTG Gene BVT0101_031634 + 0 NULL GK000029.2:5195894-5214443 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164409 1 XLOC_100213 NonCoding TCONS_00164409 XLOC_100213 NonCoding NonCoding - 29:5199612-5204201 - TSS123020 873 4 TCONS_00164409_2 46 0.768613974799542 3 0.810374891020052 0.00168317751592755 0 0 0 0 0 0 0 0 7.0695762488134e-05 1.83554276925707e-05 0.000202745138101629 6.91916648925857e-06 0.0010498577796273 1.74193706561092e-12 9.07613377510734e-05 0 0 5.74988719502194e-05 4.94256412954384e-05 0 0 0 3.84016225189732e-05 0 0 0 0 2.78041671606134e-05 0 XR_227308.1 LOC101903500 PREDICTED: Bos taurus uncharacterized LOC101903500 (LOC101903500), 6e-92 342 81.07 0.414662084765178 0 noncoding 0 0 0 0 -0.740039729851325 0.00329868412367909 -0.0322316249227819 0.497817022115588 ATAGTTTATTGAGGCAGAAGCCTGGTATGTCTCCCTTTGCCTGGTAAGGCAATAAAGCTATCCTTTTCTGCTTCACCCAAAACTGGCTCTGGGATTTAATTTGGCACAGGAACTGATAAGGAAATGAGAGTCCTTGAGAAACAGCACACAAAAGAAGAACATATTGGATCCCTTAAAGTTGAACGTCCCCTGACACTTGGACAGCAAGGAATTTGAATGAGTCCATCCTAAAGGAAAAGAAAGAAAGAAAGTGAAGTCGTTCAGTCATGTCCACTCTTTGCAGCCCCATGGACTGTAGCTTACCAGGCTCCTCCTTCCATGGGATTTTTCCAGTAAAAAGAAATCATCAGTCACAATACCAAGCTGTTTAACAATGTGAGAAATTTGAGGTGTGGACATGGCCAGCAATATCTTTGAATTCTGAAAGATCTAAACAGTTTTTTGATATGGTGTACTGTATTGTTAATTGATTGCTACTGTATTACTGAATTGATGCCTTCCGACTGTGGTGCTGGAGAAGACTCCTGAAAGTCCCTTGGACAGCAAGGAGATCTAACCAGTCAATCTTGAGATATTAACCCTGAATACTTTGTTAGAAGAACTGATGCTGAAGCTCCAGTATTTTGGTCATCTGATGCAAATAGGCAACTCATTGGAAAAGTCCCTGATGCTAGGAAATATTCAGGGCAGAAGGAGAAGAGGGTGTCAGAGCATGAGATGGCTAGACTGCATCACCAATGAATGATCACGAACTTGGACAAACTCCGGAAGACGGTGGGGGACGCGGGCCTGGCGTGCTGCAGTCCATGGGGTTGCAGAGAGTCCCAGATGACTGGGCCCCTGAACAACTGTATTGCGAAAGAAAAATTTCCC TCONS_00162917 TCONS_00162920 TCONS_00162921 TCONS_00162923 TCONS_00162924 r 3' 3517 TCONS_00162917 TCONS_00162920 TCONS_00162921 TCONS_00162923 TCONS_00162924 r 3' 4056 EMBV3_37695 GAGAGCCAGGAAACCCACAGCCACGTACTGGTTGTTCCAGTGCAGTCCCCATCCCGAAAG Variant GeneID:534606|RPUSD3:NM_001038561:155_cdna 520^604 3 EMBV3_42371 GeneID:534606 22 GENE RPUSD3 MGC133790 RNA pseudouridylate synthase domain containing 3 EMBV3_27192 AATTAAGAAAACAGAAACCTTCAAGGCTATCCTGCCCCCTACCCCCAACCTCGATAGCCC Gene GeneID:505657|INTS4:NM_001110065:13_cdna Constitutive 2 NULL GeneID:505657 29 GENE INTS4 MGC128653 integrator complex subunit 4 EMBV3_33081 CAGCTGGCCTCAAGACAAACTGGTTCTTACAGATGAGCGGGTTTGGATACTGGTGTTAGG Gene GeneID:512972|HMHA1:XM_002689170:213_cdna Constitutive 0 NULL GeneID:512972 7 GENE HMHA1 NULL histocompatibility (minor) HA-1 EMBV3_39640 ACTGGCGGGGAGCCCTACCTGAACCTGCAGCCTTTGATCTTTTACCCTGGCTATTACATT Gene GeneID:512311|SLC5A7:NM_001046116:89_cdna Constitutive 0 NULL GeneID:512311 11 GENE SLC5A7 MGC137460 solute carrier family 5 (choline transporter), member 7 EMBV3_27048 CGGTCAGCTTCACACAAAATCAGAATCAACATAGTGCAACTCTTCAATTGGATACCCATC Gene GeneID:281916|MMP20:NM_174391:5_cdna Constitutive 0 NULL GeneID:281916 15 GENE MMP20 MMP25 matrix metallopeptidase 20 EMBV3_29828 CCCAACTTGATCCAGAGACCCAAGGCGGATGACACAAGCACAGCCACCATCGAGAAGAAA Gene GeneID:512838|WBP11:XM_002692480:560_cdna Constitutive 0 NULL GeneID:512838 13 GENE WBP11 NULL WW domain binding protein 11 EMBV3_12010 CCCTTACAGTAGAGCTTCATGGCAGAGTTCAAGACTTGTCATTTTATACACAAGTACAGG Gene GeneID:505315|AMDHD1:NM_001098872:941_cdna Constitutive 0 NULL GeneID:505315 5 GENE AMDHD1 MGC148489 amidohydrolase domain containing 1 EMBV3_21742 GGTGGTTGCAGCTCTATCAGCACAGGCACCTCTGAGAAGGTTTGTCGATTATTGTAGACC Gene BVV0102_369944 - 1 EMBV3_31655 GK000019.2:27735193-27747546 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42761 CTCTTCTGGATACGGCCAGTACTTTGATGAACAGCGAGGCCAAGATCACAGGCCCAAGTT Gene GeneID:515671|RABL2B:NM_001034508:43_cdna Constitutive 3 NULL GeneID:515671 5 GENE RABL2B MGC127908 RABL2A RAB, member of RAS oncogene family-like 2B EMBV3_02067 CGACCCTCCAGTTCTGCCTCGGTGCCAAGTCATTTCCAAAGGAATAAGAAGTGAATCTCC Gene BVV0102_026598 - 0 NULL GK000016.2:39938822-39957132 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38309 TCACTGAGCTACACTCATTTCCCCACTTATTTTGGGGACGTTGGGAGCGTGTTTCGACTG Gene GeneID:100335495|LOC100335495:XM_002686179:354_cdna Constitutive 0 NULL GeneID:100335495 3 GENE LOC100335495 NULL hypothetical protein LOC100335495 EMBV3_42780 GCAAAGGGCTATTTTTAGTATACTGCCACTAAAGGACACTTATTTATATCAAACTTTTAT Gene GeneID:537799|BICC1:XM_002698825:57_cdna Constitutive 2 NULL GeneID:537799 28 GENE BICC1 NULL bicaudal C homolog 1 (Drosophila) EMBV3_21097 CAGAACATATGGAATCTCTGTGGCCCTTTCAGTGATGGTACTGGACCTTGGGCTCATAGC Gene GeneID:519902|LOC519902:XM_002693345:256_cdna Constitutive 0 NULL GeneID:519902 15 GENE LOC519902 NULL similar to rCG39757 EMBV3_08538 ATCCGACCCCTGGAGCAGCTGGAGAAGAGGGTCCAGAGAGACAAGCTGCCATTCGTCCTT Gene GeneID:519501|COL20A1:XM_002692251:1536_cdna Constitutive 0 NULL GeneID:519501 13 GENE COL20A1 NULL collagen, type XX, alpha 1 EMBV3_34475 CAAGGGCTACATACCCCCTACAGCCAAGAGCTGTCTGTTCGTTGTGGTGCAGATCGCTTC Variant GeneID:614804|LGALS4:NM_001034768:736_cdna 747^912 2 EMBV3_30379 GeneID:614804 18 GENE LGALS4 MGC127318 lectin, galactoside-binding, soluble, 4 EMBV3_03608 CCCTATGAGTGCTTTGAGTGTGGGAAGGCTTTTAGACGGACCTCTCACCTTATTGTCCAC Gene GeneID:538648|ZFP3:NM_001099089:141_cdna Constitutive 0 NULL GeneID:538648 19 GENE ZFP3 MGC160072 zinc finger protein 3 homolog (mouse) EMBV3_31308 ACATTTCTATGCAAGACAAGGCAGAGTGGTGGTCGTGGCTCTCAGCTAACCTATTCAAAG Gene GeneID:539979|TESK2:XM_002686425:394_cdna Constitutive 1 NULL GeneID:539979 3 GENE TESK2 NULL testis-specific kinase 2 EMBV3_09763 CAGGAGTCACTGGGTCAAGGGTCAGGTGGTTGTAGTCTGTACCTGAAGTCTGTGTTTGTG Gene GeneID:538456|ZBTB22:XM_002697178:218_cdna Constitutive 0 NULL GeneID:538456 23 GENE ZBTB22 NULL zinc finger and BTB domain containing 22 EMBV3_41104 CTGTTAGTGCTATGGGTTTAGTCACTGGCATTCTCGTTGGTGGATCGATAGAGACACTCC Gene GeneID:785323|LOC785323:XM_002707720:337_cdna Constitutive 0 NULL GeneID:785323 13 GENE LOC785323 NULL similar to Ninein-like protein EMBV3_41928 GCCCAAAGCAGGAGAAGAGTGTGCCATCTGCTTCCACCAGGTTGCCAACACCTGCCTAGT Gene GeneID:511385|LOC511385:XM_002691162:216_cdna Constitutive 0 NULL GeneID:511385 11 GENE LOC511385 NULL similar to lung-inducible neuralized-related C3HC4 RING domain protein EMBV3_07049 AGTGTGAACCTGAGCAGACTGCCTCCCTTTGACGTGAACCTGCAGACCAAGCTTGTGCTT Gene GeneID:100125314|ALG12:NM_001103346:2_cdna Constitutive 1 NULL GeneID:100125314 5 GENE ALG12 MGC159951 asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae) EMBV3_21109 GTGTTACTGACTGAATTTCGATCACTGGTGGTTTGTAACTCCACCTCCAGAAATGCATCC Gene GeneID:522943|NBN:XM_002692823:164_cdna Constitutive 0 NULL GeneID:522943 14 GENE NBN NULL nibrin EMBV3_33384 TTTGGTTGGAGAAGAAAGCCAGACGAGAAGTTTCACAGAGTGCCTTCCGTGGAGGCGGTA Gene GeneID:281854|IKBKB:NM_174353:29_cdna Constitutive 0 NULL GeneID:281854 27 GENE IKBKB NULL inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta EMBV3_27587 TGGCCATCACTCGCCCACTTCATTACACAACAATTATGAGCCCACGGACTTGTGTCCTGC Gene GeneID:522582|LOC522582:XM_002695725:383_cdna Constitutive 0 NULL GeneID:522582 19 GENE LOC522582 NULL similar to olfactory receptor, family 1, subfamily A, member 1 EMBV3_42655 TGTCCAGACCACACCGACATTCCGTTTACCCTTCTGTGGACCCAACCAGATCCAGCATTA Gene GeneID:510293|LOC510293:XM_002699118:173_cdna Constitutive 0 NULL GeneID:510293 29 GENE LOC510293 NULL similar to olfactory receptor MOR223-1 EMBV3_40564 GTGCCAGGCGAATTCTGTCAGATTCTTCCCTCGAGAGCAGACAGAGAAAAGGGATCTGTT Gene BVT0102_333426 + 0 NULL GK000018.2:49699041-49726377 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42683 ATCATGTACAAGGGCACCGTGGACTGCTGGCGGAAGATCCTCAAGGACGAGGGCGGCAAG Gene GeneID:282480|SLC25A6:NM_174660:2_cdna Constitutive 0 NULL GeneID:282480 Un GENE SLC25A6 ANT3 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 EMBV3_19759 GATGGCTAGAATCATCTAAACCAGAGCAGGGCAGAGGACCTGCCCCACAAACTATCAGTA Gene BVV0102_263536 + 0 NULL GK000007.2:71479027-71621005 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20572 GCCGATGCTTCTGCATACTGTGTTATGTTGCAGTCCAGTTTTGTGTGCTTTACTACACGG Gene GeneID:532989|DYRK1A:XM_002685155:131_cdna UTR3_Alt 2 NULL GeneID:532989 1 GENE DYRK1A NULL dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A EMBV3_18271 TTTGAGGACCCATTAAGTGCTTTATTGTGGGAAATTTCAAACATATACAAAGGTAGAGAG Gene GeneID:516077|BNIP2:XM_002690851:196_cdna Constitutive 2 NULL GeneID:516077 10 GENE BNIP2 NULL BCL2/adenovirus E1B 19kDa interacting protein 2 EMBV3_25273 CAAAGTTACTTTCCAATAGAGGGATGGCAGGGGTCTATCAGATGATTCCTGATTGGCTGG Gene BVV0102_137700 - 1 EMBV3_09039 GK000007.2:17814126-17832595 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17630 TCTTGTTGTTCAGTTGCTCAGTTGTGTCCAACTTCTTTGCGACACCATGGACTGTAGGCT Gene BVV0102_249499 + 0 NULL GK000021.2:16460491-16597602 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29255 TTCCCACCCCTCTAGGTGGTTACAGTTTGCGTTTCCTGAGTCATACAGCGGGTTTCCATT Gene BVT0102_378230 + 0 NULL GK000008.2:105304605-105331194 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14914 TGCCTGGAAGGTGAGGCATCTGGGGAGCTCTTCATCGGAGTGTCTGGTGGTTGGAATAAA Gene GeneID:615492|SMG9:NM_001046559:373_cdna Constitutive 0 NULL GeneID:615492 18 GENE SMG9 C18H19orf61 C19orf61 MGC134391 protein SMG9 EMBV3_19702 TAATGTTTTTAATTGCCTTTTAACCCAGTAAAAACTCAAAAGTCTATTGTCTTGCCTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05779 CAGGGTCTGTCACAATAGAGAAGAGTTGTGGAGTCCAGTGGTCTGGAGTTTGCTCTCTAC Gene BVV0102_222261 - 0 NULL GK000012.2:55685895-56443649 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040219 1 XLOC_024035 NonCoding TCONS_00040219 XLOC_024035 NonCoding NonCoding - 12:56245234-56245771 - TSS29720 537 3 TCONS_00040219_2 60 0.95903165735568 1 0 0 0 0 0 0 0 0.00159638445153344 2.20287630919147e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000309653566556467 0 0.000218217611413828 0 0 0 XM_605435.5 EXPH5 PREDICTED: Bos taurus exophilin 5 (EXPH5), mRNA. 3e-67 259 90.43 0.348230912476723 0 noncoding GAAAACCAATGAGGAGTCAGGGTCTGTCACAATAGTGAAGAGTTGTGGAGTCCAGTGGTCTGGAGTTTGCTCTCTACATTTAAGGTGATGCATTTCATCGTTGCTGTCTCTGAGAAAGAGGCAGAGTGCATGGTGGGCAACTCTGGATGTTGGGGACAGCACACCTGTGTGTGCTCTAATCCCCTTATTCCATTTCAGAAAACTACTGATTTCAAGAGGGGCTGAGAGTGAGAGGCAGGTCAAATATACAGAGGCCAAGGAACAAGTTGATCTGCCACTGTGGATCACAACCCAGGCCATGTAATGGTAGTAGAGCTGCCTGTAGTTCATAGGGTGCTGTATGGAATCTCTGCCACTGCTAAGTCACTTCAGTCATGTCTGACTCTGTGCAACCCCTTAGATGGCAGCCCACCAGGCTCTGCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCGTTCTCCAATGCATGAAAGTGAAAATTAAAAGTGAAGTTGCTCAGTTGTGTCTGACTCTTCACGACC TCONS_00037087 . 5' 559341 TCONS_00037087 . 5' 559341 EMBV3_08765 CTATTTGTGGCGAGGAAAAACCTGAGGTCTCCAGCATTTGGAGCTGTCATTCTGACGTGC Gene BVV0102_105624 + 0 NULL GK000009.2:81266871-81550375 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41565 AAGCTAGATGTCTGGGGGGCTTGTTCCTCGAGTGCAGGTCTTAAAAGTTTGAGGTGCTCC Gene BVT0102_016397 - 1 EMBV3_16432 GK000007.2:80188617-81396270 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214292 1 XLOC_130663 Coding TCONS_00214292 XLOC_130663 NonCoding Coding - 7:80818417-80819746 - TSS160326 1329 5 TCONS_00214292_5 55 0.289691497366441 1 0 0.000359867905652769 0.00142425137620505 0.00025087229929267 0.000293702752020022 7.34958207610666e-05 0.000157103978766989 0.000103355853172069 0.00014517409958099 0 4.83909867465928e-06 0 0 4.31794702903789e-06 0.000556591670400648 1.34807981296452e-05 0 0 0 7.32818737272708e-05 0.000262792112530902 4.07577726308454e-05 1.57794972045881e-55 0 0 0.000137070767020751 0.000161305625507111 0.000132641085159981 0 0 0 XM_005200703.1 ZCCHC18 PREDICTED: Bos taurus zinc finger, CCHC domain containing 18 (ZCCHC18), mRNA. 6e-107 392 91.73 0.206922498118886 0 noncoding 0 0 0 0 0.0457149812996794 0.686092576192066 0.0167874257836937 0.724073217374945 CACTATAGAGACTATACCAGTGGGAGAAGGAAGACACGGGAACACTAGCCAAGCAGTTCTTAATTGTTGTCTTAGCATTTTCATTTTCTTTACCATCCGCAACTTCGTCGTGTAATTTCAAACAACTGCGTTTCTCCCAGGAGGCTAAGCTCGCAAGAGTGCGCACATCTATCCCAGCAGGGAGTGGGGTGAGGTGGGGCGGGGCGAGGCCTGGGGCGGCCACAAGGAAAGATGGCGACCACCAGTCTCCATTCTGAAGGGTGCGCCAGCAGTCCCCAAATGTGCCGGCAAAGCAGATGTTTGAGTCTCAGGCTGTTGCGTGAAAACAAGCAAAAGAGCCTCTTTCAAACACAGCCCAGGAGCCCTGTGCTGGGTCGCTTCTGTCCAGCGCCCTGAAAGCAGGTGAGTCTGTGCTCCCCAAGCTCTTCCTCAGAACCTCTCGTGGACCTCAGAACCTCTCGTGGACCTGAGTGAGCCTTGTTGGTTTGCAAAGCTAGATGTCTGGGGGGCTTGTTCCTCGAGTGCAGGTCTTAAAAGTTTGAGGTGCTCCATATGGGGTTCAAACCCTTTTCTCCTCAGGGAGAAGTTCCAGGTTTTGACGTAAGTGACGGTCAGGGCTGGGGTTTTTGGTAATTGGGTCTCGGCCTCTCCTACCAGGTTCCACTTGGCCTTCTCCCCTCCCCCTCACATGGAGGAGTCAGTCAACCCATTAAAAATTTTTGTTGTTGTTGTTGTTGTTTTTCTGATAAAGTTGTTCTATATGTAGCTGTAGATTCATTGTGTTCATGGAAATGGGTGAATTCAGGATTCTTTTACTTGTCATCTTGAATATAATTTATCAATATTTAAATGTGGACACACGCTTTATGTTATCCGGAGAAGGCAATGGCGACCCACTCCAGTACTCTTGCCTGGAAAATCCAGTGGATGGAGGAGATTGGTAGGCTGCAGTCCATGGGGTCGCTGAGTTGGACATGACCGAGCAACTTCCCTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGCGGAGCCTGGTGGGCTGCCATCTATGGGGTCGTGCAGAGTCCGACATGACTGAAGCGACTCAGCAGCAGCAGCAGCTTGTGTATTGCCCCAGGTGTAGGCAATAAAGGGCTGCATTTTCTGAAGAGAATTTAAAAACGGTTATGAAACTAACTAAAAGTCAGTCTTCTTGTGATTATTACCATGTCCTAACAATTCTAGGCAGCGCTGTTACAAATTGAATTGTATTCCTTCGAAAGAGATGTTTTGAAGTCTTAAC TCONS_00214291 s 5' 0 TCONS_00214291 s 5' 0 EMBV3_41467 TGAAGTCTGTTCGGGAACTCATCTTGAAACGTGGGCTCACCAGGCTATCGAGGTGAACGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24368 TGTTCAGCAAGATCTGTGTAAATGGGGACGTCGCCCTCCCTCTGAGGAAATCGATGAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28849 TGAAGACAGACGTGGTCACCGTGAACCCCAGCATCATCACAGAGAGGTTCCACAAGCTGG Gene GeneID:497020|ST8SIA5:XM_002697757:281_cdna Constitutive 0 NULL GeneID:497020 24 GENE ST8SIA5 SIAT8E ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 EMBV3_18943 AAGGGGCTGACGCAGAAGGACTTGGCCACGGCCTGAAGCTCCGGGGGAAGGACATTGGGA Variant GeneID:515380|EDF1:NM_001035307:38_cdna 386^479 3 EMBV3_33993 GeneID:515380 11 GENE EDF1 MGC127033 endothelial differentiation-related factor 1 EMBV3_02075 GCATCGAACCACTAGCAGAAAGCATCACAGATGTTCTCGTAAGGTCAAAACGAGACTGGA Gene GeneID:788087|MCL1:NM_001099206:181_cdna UTR3_Alt 2 NULL GeneID:788087 3 GENE MCL1 MGC143362 myeloid cell leukemia sequence 1 (BCL2-related) EMBV3_34813 CAAGGAGTAAGAAGTTATCTAAGCTGCTGGGGGAATAGAGGCATCTGTTTGCTGAACAGG Gene GeneID:100141457|DEFB10:NM_001115084:2_cdna Constitutive 0 NULL GeneID:100141457 27 GENE DEFB10 BNBD10 beta-defensin 10 EMBV3_01048 CTAATTTGTCTAAGAGCCATAACACAGTCTGTCCAAGACCTGAGAGCTGTGACGCGCTGG Gene BVT0102_171107 + 0 NULL GK000010.2:104126407-104139092 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33523 CAGTGGTCCCTGGAATCCCTTTGTGCTCGGGTCTTGGTTTGAGGGCATTCGTTTCTTCAG Gene GeneID:504381|SF3A1:NM_001081510:29_cdna Constitutive 0 NULL GeneID:504381 17 GENE SF3A1 MGC143002 splicing factor 3a, subunit 1, 120kDa EMBV3_37441 TGACCGTGATGGACGGCTTTCTTTGCACGGCTCTGCCTGTCTGCAATGGTAGAGAAATCT Gene BVV0102_137872 + 0 NULL GK000002.2:121025346-121074246 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103595 TCONS_00103592 1 XLOC_062160 Coding TCONS_00103595 XLOC_062160 Coding Coding EIF4E2 2:120995643-121027675 = TSS76906 3374 1 TCONS_00103595_2 236 8 0.89491430177016 0.00152352428105744 0.00186376557464014 0.00121785014763397 0.00141084593279271 0.00138271553372457 0.000948016795450599 0.00197210094967137 0.00206835805319984 0.0016357900754495 0.00114500088837224 0.000416663387577541 2.46361108767963e-05 0.000424476537650318 0.000547851791090593 0.00176125915632375 0.0030473525723773 0.000452304261150307 0.000893423354924377 0.00193607024544882 0.00223945536035234 0.000205547051456426 0.00084496346480721 0.00144208274277043 0.000520003617758114 0.00151139424355672 0.00202506547158263 0.00116020908218579 0.00022354675770288 0.000162930414144232 0.0013012387257081 NM_001075795.2 EIF4E2 Bos taurus eukaryotic translation initiation factor 4E family member 2 (EIF4E2), transcript variant 1, mRNA. 0.0 6085 100.00 0.999703615886189 NM_001282958.1 EIF4E2 Homo sapiens eukaryotic translation initiation factor 4E family member 2 (EIF4E2), transcript variant 2, mRNA. 0.0 2868 80.91 0.900711321873148 TCONS_00103595_2 sp|O60573|IF4E2_HUMAN IF4E2_HUMAN Eukaryotic translation initiation factor 4E type 2; 1e-166 465 99.55 0.936440677966102 1 coding 0 0 1 1 -0.106794450042749 0.542675953022837 -0.00664096086162072 0.913778639362025 GGGGGAGCGGAAGTCACTTCGTGAGGCAGTGGCGACGGTGGCGGCGAGAGGATGAACAACAAGTTCGACGCATTGAAAGATGATGACAGTGGGGACCATGATCAGAATGAAGAAAACAGCACACAGAAAGATGGTGAGAAGGAAAAAACGGAACGAGACAAGAGTCAGAGCAGCAGTAAGAGGAAGGCTGTCGTCCCTGGGCCGGCCGAGCACCCACTGCAGTATAACTACACTTTTTGGTACTCCAGGAGAACCCCCGGCCGTCCCACCAGCTCACAGAGCTATGAACAGAATATCAAACAGATTGGCACCTTTGCCTCTGTGGAGCAGTTCTGGAGGTTTTACAGCCACATGGTGCGTCCCGGGGACTTGACAGGCCACAGCGACTTCCATCTCTTCAAAGAAGGAATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGCGGAAAGTGGATAATTCGACTGCGGAAGGGCTTGGCATCCCGCTGCTGGGAGAATCTCATCTTGGCTATGCTGGGGGAACAGTTCATGGTTGGGGAGGAGATCTGCGGGGCTGTGGTCTCTGTCCGCTTTCAGGAGGACATTATTTCCATATGGAATAAGACTGCCAGCGATCAAGCCACCACGGCCCGCATACGGGATACGCTTCGGCGAGTGCTTAACCTACCTCCCAACACCATTATGGAATACAAAACCCACACCGACAGCATCAAGGCCTGGGAGGAGTTTCATGGCCTGGTGAACAGCAGCGGCCGCTGATCGGACGCTCCCCCTCTGTCTCTCACACTCAGGGGACAATTCAAGCTTTCGAAATACAAAAATCACCTTGTGAGAGTACACAAGCTGGCAATAATCCTTTCCTGTATGTGTGTGTTTGTCCGAAGTGGATGGGAGGTCTCCGGCTGGCCCCTCCATCTGCTCACTGAAGGGACGTCCCCGAGCTGCGTGCTCCCCTTTTGCACTCATTCCTGGAGGACGGATTCCGCTAGACACCCTCCAGCGTCGCTGACTTTATAAAGCGGAAAAAAACGGAACACGTGACTTTGTAATAGACAGACTTTTTTTTTTAACGGGGTTCTGTTGGGGGGGAGTTCAGCCTTTTGTCTTGATGTGTGCTGTCCAGGTGCCTCCCGGGCACTCTGTCGTGCTCGCCTCTGCTGTACGAAGGGTGTCGTGACCATGTGTACAAGCCAGAGCTGTCGACTGAGAGTGAGCAGTATTACGAATGTCTGTGCATCCAGGAAAAGCGTTTTGTTGGAGAGTCCCAAGATAGCTATAAATGCTCTCTTCTAGATCTGCCACTAAATTATTGGGACATTTTGTTTATTTCACACCTTTGTCCCCCAAGGCCACCCTTTCGGAACGTGTGTTACTGATTCTGTAGTCTCCTGCCTTATGCCCTCCAGTCTTCCCTCCTGTGGGACTCTTTCCTTTTAGGCACTGCTGCACTTAGAATTGTAACCAGTGGACCACACAGGTCTCACTGAGGCGGCTTAGAAGGTATGATTGTAAATTAAACTGCACCAAACTGCAGTTTGATGAGGAGCGAGGTTGTATTAGGGGTTCCAAGGGCAGGATTTGGAGCTGAGGGCAGTTTCTGACCCAGGTTCCCAGATGGGCAGGACCTGTTGTGTCCAGCCTGTTGTTGTGGGTTCTTGCATTCCCCTCATGCAAGAAGGGAAGCAGAAGTTGGCTGCTGCCAGGTGTTAACATGGTCAGTTCTGTGATCTCAAAACTAGGACATCTGGAGAAAAGGTGACCGTGATGGACGGCTTTCTTTGCACGGCTCTGCCTGTCTGCAATGGTAGAGAAATCTGCTGTCAGTCCTCATCATCTGGTAAATATGTTAGCTGGTGTGTGCTGATCCAGGAAGCCCAACACAAACCTTGTGGGGTGTTGCAGGCAGGCTCTAAAAATGACTAGGCACACGCCACAGAAGCCGGGTGATCTGACTCCAGAAGGACTGAAGTCAGAGAGGTCAGAGAACACCTAGGGTTGGACCAAGTGCCGAGGACCAGTCCTCAGCAGCCTCCGAGGAGTGCCATCTTACTTGGCTCTTGTGAGCACAGATTGCAGTACCTTAAATTAAGGCCTCCCCTAAAACCTATCCTTGCAGGCCAGGGTCCTTGGCCACCTGGTCTCAGAGAAGTCATAGGAGAGTAACAGGCATTTCCTTCTGGTATTTATATTAACTCTTCCTACTTTCCAGCTCCTGAACACTCTCATTACCACTGTCTTGGGGTGCTTATTCCTAAAAGAACAGAGGCGTATAGGGGCCAGAAGGGAGGTGCTTCCATTGCAGGTGAAATTAGATCAGAGAAGTCTAGCAGCAATTTAAACTCCAGGAGTATGAAGAATGAACTCTAGTGCCCAGACAGTTGTGAAGGGCTCAGACAAATACAGGAGCAACATTGGCCCAAGCAGGGAACAAACGCTGCCTCCTGAGTTTAGACACCAGGGAGGTCTTCACTTATGCCTAAACTCAGATTTGCCCTGAAAATCCCAAAGAGAGCGGACGTTTGGATTTGCCCTCTGGGCATCTACCTGACTGACTGTTAGCATGTGTGTGTGGGTGCATATGTTTGTTACATGTTCACAAGTGAAGGTTTTGTCAGATCGAGTGCTTAGTTGTCCATACTTGTGTTTTTGTTTTTTGGGGGGCGGGGGGGGGTCTCGTTTTAATTTCTTAGTCTCTTGTGTTTTCTAGAGCTGCTGATGTCACTCCCCGCCCCCCACCTTCCTCTTTGTCTTTGCAGTATTTGAAAGTTATTTTTTCCCCATCAAAAATATGCTGGCTAGAACAAGAGTTATTTCTGCTAAGCAGTGTCTTTCCCTAGAACTCTCCAGATCTTCTGCCTAACAGCTTTAAATCAGAGATCGAAGAGTCAGTTCTCCAAACCACCTGTTTTCCACACAAGCTTACGAGGTCTTTTCAATTCCTAATGACTCCATGGACCTCTGTGACGCTGAGACAGGACACAGTTGCAGTTATGGTATCACCATTTCCAGAGAAAAAGGGAAAAAAAGGTGCACCAGGCATTTGCCAACCTAGCAGACGTGTTGGGTGGCTGCTGGAGGTGGGGCGTCCAGTGTGCCCAGGTGGGCTGTTCCCAGGACCCCCAGACACTGGCCCCACGCCTCGCCAGTGCTCTTTTCCTCTTACCCTCCTGTTCATGTGTGTGTGTGTTTGCCCTGTGACATTGGCAGTGACAGTTTTCCACCCAGAGAGACGCTTGTGGTCCACGATGCTCCAAGAATGAATTTCCAAGTATTTGCCAGTGGAGGAGCAGAGGCTGTGACAAGAGTGATTTAGTGTTGCACTTTCAGAGCAATTGTCTACTGCGGTAATAAATGGAAAATATCAGCAAGGA EMBV3_32352 CAAGGAGGTAACAGATCAGCTGGCAGTAAGACAGAAACACAGACTGGCCCTAAAAGCCAC Gene BVT0101_037282 + 0 NULL GK000013.2:52291265-52437393 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37889 TTGGGCAGGATAAAGGTGCTGGGAGGAGCATGGGTGTGCAAGTCCTATCAGCCAAGAAAT Gene GeneID:536763|EGLN2:NM_001102193:694_cdna Constitutive 0 NULL GeneID:536763 18 GENE EGLN2 NULL egl nine homolog 2 (C. elegans) EMBV3_08436 CATTCTAAAAGTAATGGCTTTTATTTAATAATGAAACATGTATGTTTTATTTAAACATAC Gene GeneID:404072|CCL11:NM_205773:194_cdna Constitutive 1 NULL GeneID:404072 19 GENE CCL11 MGC137967 chemokine (C-C motif) ligand 11 EMBV3_24510 TCACACCTGGAGCTGTTATGCTGCGAGTTGGCATTTCTAAAAAGTTGGCTGGTCCTGAGC Gene GeneID:540735|ZC3H13:XM_002691780:382_cdna UTR3_Alt 2 NULL GeneID:540735 12 GENE ZC3H13 NULL zinc finger CCCH-type containing 13 EMBV3_34293 GAAGAGACCAAGCTCAAAGGCGTCATCTACTTCCAGGCCATCGAGGAAGTCTACTACGAC Gene GeneID:533145|PHLDB3:NM_001099056:304_cdna Constitutive 0 NULL GeneID:533145 18 GENE PHLDB3 MGC152326 pleckstrin homology-like domain, family B, member 3 EMBV3_03874 CTCAACTGCTGGGGCAGCCGTCTCACTGATCTGTGACGGAGGAAGAGGTGTCCCGGGCGC Variant GeneID:518967|C1H21ORF2:NM_001075781:38_cdna 169^445 5 EMBV3_25671 GeneID:518967 1 GENE C1H21ORF2 MGC139666 chromosome 21 open reading frame 2 ortholog EMBV3_23607 GCGAGCAAACAAGAAGCTGATGAAAAGAAGCGAGATGTTAAAGACACACAGTGCAAGTGG Gene GeneID:100297496|LOC100297496:XM_002687833:153_cdna Constitutive 0 NULL GeneID:100297496 5 GENE LOC100297496 NULL similar to osteoclast inhibitory lectin EMBV3_04409 AGCTGACTGGGCAGGAGGACAGCCTGCAGATGCACCAGCTGAAGATGAAGGTAATTAAAA Gene GeneID:511085|C7H19orf60:NM_001075490:44_cdna Constitutive 1 NULL GeneID:511085 7 GENE C7H19orf60 C19orf60 MGC142646 chromosome 19 open reading frame 60 ortholog EMBV3_34800 TCCAGCGGTTTCATGGGATGCAATACTGAGTGTTCTAGTTCCTGGAATTAGTTAGCAGGG Gene GeneID:100300400|LOC100300400:XM_002688257:173_cdna Constitutive 0 NULL GeneID:100300400 6 GENE LOC100300400 NULL similar to clock EMBV3_24650 CTACGCCACTACCTCAGAGCTGAGGCATCAGTTCCATCGTCACACGGGGTGGACACTGAA Variant GeneID:512749|CCDC123:NM_001083675:607_cdna 384^570 1 EMBV3_03168 GeneID:512749 18 GENE CCDC123 MGC157068 coiled-coil domain containing 123 EMBV3_16531 AACACATGGGAACCAGAAGAGAACCTGGATTGCCCTGACCTCATTGCTGAGTTTCTGCAG Gene GeneID:616506|CBX1:XM_002695913:268_cdna Constitutive 0 NULL GeneID:616506 19 GENE CBX1 NULL chromobox homolog 1 (HP1 beta homolog Drosophila ) EMBV3_16332 GAAGCCTCCATCAATGAGGAGAAGTTTGCCCGTGTAGAGGCCGAGTTGCACCAGTTGCTA Gene GeneID:539952|LRRC14:NM_001102379:122_cdna Constitutive 1 NULL GeneID:539952 14 GENE LRRC14 KIAA0014 MGC159994 leucine rich repeat containing 14 EMBV3_31060 CCTGTTTGCAGGGGAGCGATAGATAGCTAGAGGGAAGCTGCTATATAACACAGCGAACTC Gene BVV0102_176377 + 0 NULL GK000008.2:27269195-27613389 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35984 GGGCCTTAAGCTTTTGAAAATAAAGTTTAGAGATATAGCATATGAATACCACTGTAATAC Gene BVV0102_384730 + 0 NULL GK000001.2:1233647-1233902 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002843 TCONS_00002844 TCONS_00002841 TCONS_00002842 TCONS_00002845 TCONS_00002840 1 XLOC_000702 Coding TCONS_00002843 XLOC_000702 Coding Coding SON 1:1233610-1265669 j TSS1456 3465 1 TCONS_00002843_3 487 11 0.892257782768732 4.61574793791374e-43 1.94616036571417e-05 0.000135197571435342 0.000916469980805476 0.00100588387463562 2.27909671692889e-11 0.000481042866240985 0.000454909957305855 0.000225802084147024 0.000729479420062528 0.00150520393104068 0.00104982414691197 0.000882735990801628 0.000772878287635591 0.000850659362107301 0.0029866802092501 0.00542424846176716 0.00577808136010107 0.00129719540213508 0.00138839207968093 8.96585201886767e-11 0.000318325694992549 0.00303651614637319 0.00411377873593833 8.88808950062538e-07 0.000266667936430733 5.25173616263707e-15 0.00142637762561102 0.00123450251785839 0.00276299817613496 XM_005201105.1 SON PREDICTED: Bos taurus SON DNA binding protein (SON), transcript 0.0 3858 100.00 0.617027417027417 NR_103796.1 SON Homo sapiens SON DNA binding protein (SON), transcript variant h, 0.0 3828 93.51 0.712842712842713 TCONS_00002843_3 sp|Q9QX47|SON_MOUSE SON_MOUSE Protein SON; 0.0 710 98.63 0.745379876796715 4 coding 0 0 0 0 -0.398245569806372 0.0482954694482251 -0.0277523045193609 0.656709225791939 CCGCCCTCGACTGGCTTCGCCTCCCCATTGGCTGGCGCGGCCGGTGGTCCCCACCCCGTGGTAATCAAGAACGATTCCCTCTCGCTCTCGGGCGCGGCCTGAACCTCCCCTCCCGAGCAAATCTCTTAAGCCTTACTCGTTTACAGTGTTTAATTTTGTGGTACCAGGTGCCACGTAAAATCTATTCTCCCCCTCCAGAACCTCCTGAGCTCTGAGGGTGGGGAGCGCCAAAATGCTAAACCCATGTTCAGCTGCTTGTGTGTTGCTTAGGAATCAGAACTGACCGGCTACTGTGCAAAAGTCTCGTGACGCGCCTGGCTCCTGACGAGATTACAATGCACCAGGGTTTGAGCTCAGCTGGCTCGTGACCTCTGACCCAATGCTAAAATGGGGGGGGGAAAAAAAGCTGATTATAGGATGCCATGGGAGAGAGATGGGGGGATGAAAACGTTATTCTTCGTACGGTGGGCAGGCGCTGATAATATGCTTTCCCGGAGGGATCTCCCCTGCCGAAACGCGGGAGACATGTTGGAGCACCCTGTTGCCCTTCCCGCTCCCTTTCCTCACGGAATTTAATCTCGGGTAGTTAGTGACTAAAATAAGCCTCTTAAACGCCCCCTCCCCCACGAACGCTGGTGAAGACTGACAACTGAAGCTGACACAGCCACCTCGAGAGAGACTTCTCCTGTAATGGCGCCTGCGTCAGTCACTAACATGGCGGACACAGTCGTGCGCGGCGCAAACGTCAGCAGCTCTACCCTAGACGCTCAGAAACAGCGAAGGAGAGCGGGGCCGTGCTCACTGATAGGTTCGGAGGCGGAGCGTGCCGGTCTGGGCTCTCCCACAGGAGCCAATCAGGACGGCGAGAGACGGAATTGGCCGCTGCGCCTCCTCCCGAGGCATGCTGGGAGCCTGGAGGACTAGTGAGGAGGAGTTGAGAGAACGGAGCGGACGCCATGGCGACCAACATCGAGCAGATTTTTAGGTCTTTCGTGGTCAGTAAATTCCGGGAAATTCAACAGGAACTATCAAGTGGAAGGAGTGAAGGACAGCTCAATGGTGAAACAAACACACCTATTGAAGGAAACCAGGCAGGTGATGCAGCTGCCTCTGCCAGGAACCTACCAAATGAAGACATAGTTCAGAAGATAGAGGAAGTACTTTCTGGGGTCTTAGATACAGAATTACGATATAAGCCAGATAAGGCTCAGTTACTTGAAATAGCCAAAGCTAATGCAGCTGCCATGTGTGCTAAGGCTGGTGTTCCTTTACCACCAAACCTAAAGCCTGCACCCCCACCTACAATAGAAGAGAAAGTTGCTAAAAAGTCAGGAGGAGCTACTATAGAAGAACTAACTGAGAAATGCAAACAGATTGCACAGAGTAAAGAAGATGATGATGTAATAGTGAATAAGCCGCATGTTTCGGATGAAGAGGAAGAAGAACCTCCTTTTTATCATCATCCCTTTAAACTCAGTGAACCCAAACCCATTTTTTTCAATCTGAATATTGCTGCAGCAAAGCCAACTCCACCAAAAAGCCAGGTAACATTAACAAAAGAATTCCCTGTATCATCTGGATCGCAACATCGGAAAAAAGAAGCAGATAGTGTTTATGGAGAGTGGGTCCCTGTAGAGAAAAACGGTGAAGAAAACAAAGATGATGATAATGTTTTCAGCAGCAATTTGCCCTCTGAGCCTGTGGACATCTCTACAGCAATGAGTGAACGGGCACTTGCTCAGAAAAGACTCAGCGAGAATGCATTTGACCTTGAAGCTATGAGCATGTTAAATCGTGCTCAGGAACGGATTGATGCCTGGGCTCAGCTGAACTCTATTCCCGGCCAGTTCACAGGAAGTACAGGAGTACAGGTTTTGACACAAGAACAGTTGGCCAATACTGGTGCCCAAGCCTGGATTAAAAAGGATCAGTTCTTAAGAGCAGCCCCAGTAACTGGAGGGATGGGAGCCGTTTTGATGAGAAAAATGGGCTGGAAAGAAGGAGAAGGATTAGGAAAAAACAAAGAAGGAAATAAGGAACCTATCCTAGTTGATTTTAAGACAGATCGAAAAGGTCTTGTTGCAGTAGGAGAAAGAGCACAAAAGAGGTCCGGAAACTTCTCTGCTGCAATGAAAGATCTATCAGGCAAACATCCTGTGTCTGCCTTGATGGAAATCTGTAATAAGAGAAGGTGGCAACCACCTGAATTTCTCTTGGTCCATGATAGTGGCCCTGATCATCGCAAACATTTTCTCTTTAGGGTATTGATAAATGGAAGCGCTTACCAGCCCAGCTTTGCCAGCCCTAATAAGAAGCATGCTAAAGCCACAGCAGCTACTGTGGTTCTTCAAGCAATGGGCCTTGTACCAAAGGACCTCATGGCTAATGCCACTTGCTTCAGGAGTGCCTCACGTAGATAGATTGAGGTTTTATATTAATCATTTCAGATAATTTTACTCTGCATCAAAATGTATTTCCTCTTTAATGTTGTAAATATTTGGCAATTTAAGACATTGTGTAAAAAAGCAATCTGTACAAACATCTCCAGGCTTTGATTTTTGTACCATGGAAATTGTATTTAACCATACAGGGTTTTGGTATGTTTATATTGTTTACCTTAGTGATGTATTTGTTTAAGTGGCTAACATCCAAACGATTGTTCGAAGGCATCCGTAATCTTCAGTGTGGAATGTTAAAAATAACGCTTTTATACTGTATTTTGTACTATGATGTAACTCCCCTTCCTTATGGCTCGGCTGCTGTAACACTTGCCTGTAATCAGTGAAGGGCTGTGCACCTTGTACTAGTTCACAATGGGTTCTGCTGGACAGATACTGGGCCAGTGTTACTGAGTTAATCAAGCAAGATCTGTTCCACAGGGCTAATGCCACCACCTCCCCTTTCAAATTTTGTAGAGGTTATTAAAAAAGACAGTGGTATGTTGTGTGATGATCAGCACAAAGTCCTGCGTTTCTGTCAGAGCCACTTGGGCCATGAATGAGAAGGGAGTCAAAAATGAAGTCTGACTAGAATTTTACTGCAGAGGCCAAGTACATTTAGTATGGCATTGAGTTGTGATATAGTTTTACTTTGATGTGCATTTTGAATTTCAGCTACATCTAGATAGACGTAAAATGATAATTAAAATGCTGTAACCAACTTATCTAATAAAATCGGCACCCAGCCACTATTTTGTTGACTATGAGAAAGTTTAAGTTTATGTTAATTTTTAGGGTCTGATAGAATATTTCATGTGTATTACAGTGGTATTCATATGCTATGTCTCTAAACTTTATTTTCAAAAGCTTAAGGCCCAAATATAAACTTCTCTGGAATAAATGTGGTGTTTTATTTTCTGGATTACAAAGTGAACACATACTTCTTCACTACTGTTACTTCTTTACCCAATGCTTTTGATTTCTAAACACTTTTATTTAAGAAAATTTGAATTATATACGTATATAT EMBV3_33462 AGATGGAGCAGGGCCTTGTGGGGCATAGTGAGTGATGATGGTGGACCAAGTGATATGGAA Gene BVV0101_005409 + 1 EMBV3_14993 GK000030.2:91391795-91441701 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28868 CAAAGAGCAACCCAAAACACAGACACACGCCCACTGAAATGAAGAGCAACCCAATCCTAC Gene BVT0102_055012 - 1 EMBV3_19383 GK000007.2:104752241-104890335 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214821 1 XLOC_130772 NonCoding TCONS_00214821 XLOC_130772 NonCoding NonCoding - 7:104834680-104837545 - TSS160575 1575 2 TCONS_00214821_3 78 2 0.450768156424581 0 0 0.00023422333218859 0 0 0 2.22160434647492e-05 0 5.79038263890696e-11 0 0 0 6.43344383257633e-05 3.14200166126181e-11 0 0 0 0 0.00021854224318887 0 0 0 0 0 1.86854684526073e-05 0.000125252696931608 1.37110114320069e-05 0 0 0 0 noncoding CAGCCTATTTCCTTAATAAACAGAAGTAAGCCAAAGAGCTTCCAGCCTTGTGCTGTTTTAGCTGAGAAGAAACCAGAAAGAGAAGGTCAGGATGGAATGCAACTCCCTTTCCTTTGTGACCTCCTCAAAGGAAGATGAGAGAGCAGTGTGAGATTTCTGATTCCACCCAAAGAGGCATCACTCTCAGAGGCTAAGAGCTCATTGAAGTGCTCCTTTCAAGATGTCAAGGGCAAGCAGCTGGGCTTGGGGGAAGTGCAGAGATAATTCTGCTGAGCCTTTGTTTCCCAGCCCGTCTGGCAATCACCAGCACTGCGGCAACGACAGGAAAAGCCTTCAACGCCCACTTCCTTGCCACACAAGAGCCGCATTTCTGAACTGGGTCAGCCGGGTGAGGCGTGGCCACCTGTATGGACCTCCAGGCACGTGAAGCCACTCTTGCCGAAGACGTTTGGTTGGAGAATTTTGGTTTTGTGGCTGTGTACACGTTCTGTCATTGCATGGCCTGTGATGCAGAGAGCATATCTCTTCCCCCTGAAAAGCCTTGGCAGAGAGCTTTCATTTTGGAGGAAGCTTATTTCCGGGCAACCATCTCCAGGGAAAATGAGTGTGAGGCAGTAGGCAGTAAACAACATCGTATCCCATAGGGACGGAGGTGACCCGAATGAGCTCCGGAGCGAGTCCGTGATAGCGGCAGAATCATTACAGTGTGTGCGCCTGCCCAAGTCCATGTGTAATTGTAATGTATAATTAATACAGAGCTAAAATTAAACTCCTGGGTGAAAGAGACGGGCAGGCTGAGGAGGCTGAGGAATATCAACCTCTAAGATACAGCTTGTTTATGACAAATGTAGGATTGGGTTGCTCTTCATTTCAGTGGGCGTGTGCCTGTGTTTTGGGTTGCTCTTTGCTAATATTTCAGCCTTGAGGAATAAGGATTCCACAGTTATCCTCTTCCCATTCCTTCCAACCCCAGGAAGAAACTCTCTTTCAAGTAACCTTGTCCTCAGGCCACTGAAGTACTTTGGTTTTTCCAGATAATTTTTCTCAAGTGACGAAACTCACAAGCAAACAGAGACAGGACACGCCCCTTTCCTGGTGCCATTCCTTGGTGCGCTCTTGACCCTGACTTTGCCATGAGTTTGCAGGCGTGTCACCTGAGGAGACTTCCAGCTCTCGCTCGTGAATACGGCTCACAGCGCCCTCCACCATTCTTTGGACCTTGAAGAGAGGTGACCACTGGTTGCCATTGTGGCCCTTGATGGTTAATTAAAGTTTGATTCTGGGAGCAGCGGTTTTTTTGAAACAACTCTCAGGGTAACTAAGCTTACTTCTACTTTTCAAACCCAGACTTCACGTTAGCCTCTGCATTCTATTTGTGCTAAATGTGCAGTACTGAAGAATTTAGAGAGAAGACAGTTTTTACTTCTCTTCTTTCCTAGTTGATTGTTTGAAACTCACTGACAGGCTTGAGCTGAACCATCGTCTGGTTCCGAATTCCCACTTCAGCGTTGTCCACACGCGGACCCTCTGTTCCTGCTTTTAGCTGGATGCTCTACCATTTTCTACCAGAGGTTA TCONS_00218247 TCONS_00218248 r 3' 52791 TCONS_00218247 TCONS_00218248 r 3' 55655 EMBV3_40415 TAGTGTGTTTTAAATTCAGGTCATTCGCCTGCCCTGCGCCCCTCCCCCCGCCAAAATAAA Gene GeneID:539728|MOCS3:NM_001081734:1240_cdna Constitutive 1 NULL GeneID:539728 13 GENE MOCS3 NULL molybdenum cofactor synthesis 3 EMBV3_40871 GTCAGGGGGTTTCTTTACCACTGAGCCACCAGGGAAGACCATACAAGAAAATACACTGCA Gene BVT0102_133898 + 0 NULL GK000001.2:154629175-154923158 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002751 TCONS_00002750 1 XLOC_000677 NonCoding TCONS_00002751 XLOC_000677 NonCoding NonCoding LOC100848527 1:154658030-154669398 j TSS1403 486 0.248971193415638 4 0.957596551420779 0.000354481528187499 0.000848716377217878 1.13715284803606e-07 0.000808282946024455 0.000507649302063769 3.37381685422405e-08 6.35998024787055e-08 9.4528208175221e-08 9.22877078675012e-08 5.59533038542778e-08 3.19678720197334e-05 1.55869142656443e-07 3.77378616409009e-08 5.52265938055949e-08 4.17812450040373e-08 0.00135291840628292 1.51174063910549e-05 0.000789536585465708 4.67148087324409e-07 0.00199508545095658 3.88996688706548e-08 0.000174566951342777 8.60115624019426e-08 0.000317262823407376 1.07194930056668e-07 1.0298512967441e-07 0.000101657263792046 1.13238391418122e-07 0.000245243174321819 0.000286913194478125 XR_233482.1 LOC100848527 PREDICTED: Bos taurus uncharacterized LOC100848527 (LOC100848527), 3e-142 508 100.00 0.576131687242798 0 noncoding 1 1 1 0 -1.75137659966501 0.0101735262513337 -0.141953164739465 0.0268645419945592 AGAGAGAGCCGCGCGGAGCCGGGGGAGGGGCGGCCAGGGTGCACAAAACCCGAGGGAGCGGGCCGAGACGTGGTCCCCGGGAGGCGGCTGTCCCCCCTCGGGGGGCCGCGCAGGAGGGCAGAGGCCGGAGGGAAGGGGCCGAGCCAACTGGCCGAGTCTGACACGTCGAAGGAGAAGGAGCTCTCTTCTCTCCGACCCTCGGCCCTCCGCACCTGAGGAGCCGCGCTCTGTTGCCATTCCAGGCTTGTGTGGGAGAAGACTGCTGTGCGCCTGTGTCTGTCCGCCCGGGCGACTCCAGCCCTCGGTTAATGAAAGGCAAGAATACTAGAGTGTGTTGCCATTTCTTCTCCAGGGGATCTTCCTGACCCAGGGATCAAGCCTGCATCTCCTGCATTGTCAGGGGGTTTCTTTACCACTGAGCCACCAGGGAAGACCATACAAGAAAATACACTGCAACATTAAATAAAGTTTTGAGTGAAAGAAATA EMBV3_37139 GGGCAAGATGCTGCCAGACAATATCTCTTTAAGGCCACAGTTCACTCTCATTATTCTGGT Gene BVV0102_311485 - 1 EMBV3_05380 GK000005.2:74881405-74920046 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04235 CATGGCCGTGGCCACAGACAACTTCATCAGCACCTGTTCTTCAGCCTCTCAGCCCTGGTC Gene GeneID:527643|TESK1:XM_002689677:90_cdna Constitutive 0 NULL GeneID:527643 8 GENE TESK1 NULL testis-specific kinase 1 EMBV3_28881 GCCATGTTAATAACAGTAGTTTCCTATGTTTGCAAAAGTTTTGCAAATGTCATTAGGTGA Gene GeneID:534351|TMED5:NM_001046377:171_cdna Constitutive 2 NULL GeneID:534351 3 GENE TMED5 MGC128799 transmembrane emp24 protein transport domain containing 5 EMBV3_15762 AGGTCGATTGACTTAATTGAGGACTCTGGAGGGAACAGGATTCAGGAGAGAGAATCATGA Gene BVV0102_232999 + 1 EMBV3_41291 GK000029.2:46716792-46759817 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12399 AGAACTAGTTTGCTTATCAATCGTATGAACGAATGGCTGGTTGAAACAATCTTTCCTTAC Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_20282 ATGGACTTACCTACTGCCAGGCCTACGGAACCAGAGTCCACCAAAAATGACCGTGAAGGA Gene GeneID:526103|TNIP1:NM_001024554:61_cdna Constitutive 1 NULL GeneID:526103 7 GENE TNIP1 MGC128140 TNFAIP3 interacting protein 1 EMBV3_15975 CCCAAGAGGATCGGTCAGCAAAATCCAGAAACTCATCCATGCCAGGCCCATCGATCGTGA Gene GeneID:337904|PAG10:NM_176621:128_cdna Constitutive 0 NULL GeneID:337904 29 GENE PAG10 NULL pregnancy-associated glycoprotein 10 EMBV3_05841 ACTTCATCAAACCGCAGGTGTGTCCTCTGTGTTCTTGGACTTTAGTCGGATTAACCTAGA Gene BVT0102_211631 + 1 EMBV3_05787 GK000018.2:51697162-51702115 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33456 TCGATGCCCTGATGCTCAAGACTCCATCCTTGAAAGGCCTGATGGAAGCTATCTCTGACA Gene GeneID:617248|GRHL1:NM_001076450:237_cdna UTR3_Alt 2 NULL GeneID:617248 11 GENE GRHL1 MGC139899 grainyhead-like 1 (Drosophila) EMBV3_18155 CACCAGGGCTTCTCGTGGGCCCACCTGTGTGACTCCTGGACATTTTCTTTTGGTAAAATA Gene GeneID:787681|PPIE:NM_001098161:337_cdna Constitutive 3 NULL GeneID:787681 3 GENE PPIE NULL peptidylprolyl isomerase E (cyclophilin E) EMBV3_28413 ATCCACATGGGGCTGCTCAAGAGTGAAGACAAGATCAAGGCCGTTGCCAACCTGTACGGC Gene GeneID:616055|CHADL:NM_001110089:207_cdna UTR3_Alt 2 NULL GeneID:616055 5 GENE CHADL MGC179327 RANGAP1 chondroadherin-like EMBV3_29769 TTTCTGGATGCAGTGATGGAGTGTCTCAAGAAGGCTCAGCCAGCAGCACCAAAAGTACAG Gene GeneID:527459|RICTOR:NM_001144096:36_cdna UTR3_Alt 2 NULL GeneID:527459 20 GENE RICTOR NULL RPTOR independent companion of MTOR, complex 2 EMBV3_33974 CCCTGGAGAAAAGAATTGCACTGTGTATATCTCTTGGAATATAAGACAATAGTATTTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27707 CTCGCCATGTGCCCCCAGTCCTTAGAGGGTAGAACTGCTCCGTCCAATTCTGTAATTTCT Gene GeneID:537366|LOC537366:NM_001076093:9_cdna Constitutive 1 NULL GeneID:537366 5 GENE LOC537366 NULL similar to Polycystic kidney disease and receptor for egg jelly related protein precursor (PKD and REJ homolog) EMBV3_05616 GCAGCGATTTCCCTGATGCCTTACTGGAAACATAGGAGTTCGTTTACTTTTCTACCACAC Gene BVT0102_064725 + 0 NULL GK000011.2:47210733-47220143 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027812 TCONS_00027810 TCONS_00027813 TCONS_00027819 TCONS_00027807 TCONS_00027814 TCONS_00027817 TCONS_00027809 TCONS_00027818 TCONS_00027816 TCONS_00027820 TCONS_00027808 TCONS_00027815 TCONS_00027811 1 XLOC_015341 Coding TCONS_00027807 XLOC_015341 NonCoding Coding RPIA 11:47219565-47225514 j TSS19636 1076 1 TCONS_00027807_4 94 3 0.81960322797579 0.0269857511010008 0.0276144798759742 0.0302838832694163 0.0207367324717301 0.0265326879567491 0.0194049460370562 0.0155863720679364 0.0221604430645582 0.0463587152584349 0.00217933372151006 3.30695740509789e-41 0.00142320247082869 0.00503618305953399 0.00515065016123967 0.0127167365285009 0.02671039612369 0.0153648534728254 0.026908944143132 0.0130343824453492 0.0122158109957426 0.0064291055606095 0.0163915968665628 0.00993200690794109 0.0171255354651448 0.0431928491571951 0.0276023078383913 0.0171504422050936 0.00364846947452172 0.00372573659681894 0.0139262289267519 NM_001035433.2 RPIA Bos taurus ribose 5-phosphate isomerase A (RPIA), mRNA. 0.0 872 100.00 0.447955390334572 NM_144563.2 RPIA Homo sapiens ribose 5-phosphate isomerase A (RPIA), mRNA. 0.0 825 77.61 0.963754646840149 0 noncoding 0 0 0 0 1.44755492557997 0.00989552774993715 -0.740219836166956 1.98254674523596e-05 GTGAGTGGCTGGAAGGGTCCTGTGGTAACGGATAATGGGAACTTTATCCTGGACTGGAAGTTTGACCGGGTCCACAAATGGAGTGAAGTGAACATAGCCATCAAAATGATCCCAGGTGTGGTGGACACGGGGCTGTTCATCAACATGGCCGAGAGAGTCTACTTCGGGATGCAGGACGGCTCGGTGAACATGAGGGAGAAGCCGTTCTGAATGGGCCCTGCAGGAGCAGAGTGTGTTCCTCTTGCGTCCCCAGCCCACCGCCAAGGTGGCCATGCCTCTCTGAGCCTTTGCCTTAATGTATCTGTGCCAGGTGGACAGCTTGGCAGGGTGAGGGTTAAATCCAGTCTTCTGAAGTATTGTTATTAAATGTCTTTTTAAAAAGAGAGATATAAACATATATATATTTTTACTATTAAAAATGCTCAGTTGTTTTTTTTTAATAAAGTGGAACTTGATTTCATGTTTTATAAGAAACATTTACCAAAAAAAAAAAAAAAAAAGGACTGTCTTTTAAACTTTTAACTTGAGCCTGCTGGTTAAGCTTCTGAATATTGGGTTTGCTGAGAAATATAAGTCAAACGTTTCTTCAAACTGGTGAAATGAAGGGCACAGCCAGCAGCGATTTCCCTGATGCCTTACTGGAAACATAGGAGTTCGTTTACTTTTCTACCACACTGTTTTGTTTTTTAGTTTTTGTTGCAATTACGCACAATCTGTAGTTCTGTGTTCTAAGAGGTGAACTATAAAAATATAAGTCTGGCGAGTATAGGGTGTGGTGTGTGATGACTCAGAATGTGTAAACTACCCAGGGAGGGTGTGGGAGTTCTTCAGCTGAGGTCATGGGTTCATTCAGACCCTTTTGTTTTGAAGCCATTGGACAGAAATACTTGCCAGAACTGCCAAAGCACTGCTGTGAAGCACCTTTCAATGACTGTCTTTTTGTTGTTAATATTTTTTTCGTTCCTTTGTTGTTACTTGGCATGGTTTGGCATCAGAAGTTGTACCTCTTTATATTGTTTGAAGGTTGAAATAAAACAGTATGGTGCCATTTTGGCTCTTTGTCTTTGTTATATAAT EMBV3_43361 CATTACTGGTATACAGGAAAGCGGCTGACTTTTACATGTTTACTTTGTACCCCGCAACCC Gene BVT0102_265716 + 0 NULL GK000011.2:104270225-104296130 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029343 1 XLOC_015722 Coding TCONS_00029343 XLOC_015722 Coding Coding SURF6 11:104290422-104302975 = TSS20424 7466 1 TCONS_00029343_2 353 0.265604071792124 5 0.405592734225621 0.000459752486648918 0.000128818619495069 0.000207134266928084 0.000240247248232808 0.000272450489483529 5.8451723507325e-05 0.000289398563993135 8.27869941170508e-05 0.0001265214118583 0.000179454916312608 0.000164958713155298 0.000189835126871864 1.27435920738723e-05 3.12317122822401e-05 1.8309963572873e-05 0.0039894180642553 0.000791814966683967 0.000739549187854213 0.000365270419182336 0.000188414284985381 5.38326680945359e-05 0.00118590705017326 0.000551584172994658 0.0013040411290667 0.000199913375852323 0.000328399239241005 0.000123189886636532 0.000142918783559023 0.000176689323042029 0.000619101916465558 NM_001075529.1 SURF6 Bos taurus surfeit 6 (SURF6), mRNA. 0.0 3025 100.00 0.224484328957943 NM_006753.5 SURF6 Homo sapiens surfeit 6 (SURF6), transcript variant 1, mRNA. 0.0 949 79.15 0.144253951245647 TCONS_00029343_2 sp|Q0VCY3|SURF6_BOVIN SURF6_BOVIN Surfeit locus protein 6; 0.0 675 100.00 0.997167138810198 1 coding 0 0 0 0 -0.093801093723557 0.619590643159243 0.0108139280854629 0.898230318871852 CCGCGCGCTGGCGGCTCGGCGCTCGGCCAGCCGCGCCTGCGCACGTGGTGATTTCCAGCGAGCGCCGCTGGGCGGGTGAGGGTCTTGGCTCGTGCTGAGGGCCCTGTGGGCCTGGTGGCGGCCCGGAACGCTGCACCCCGGTCCTCCTCGCTCCGAGCAGGACGGTGAGCGAGCCCCGGCCGACCCCCGAGCCTCCGGCTATGACATCCCTGCTGGCGAAGGACGCTTACCTGCAGGGCCTGGCCAAGAAGATCTGCTCCCAGCCCAGCGCCGAGCCGCAGAAGCGCAAATCGGCTGGAAAAACTCAAGTCTCAGAAGCTGCTGCGCCCCCCAGGAAGAAGAGGAAGAAAGCGCAGAAGAAATCCCGGGAGCGGGAGAGGAAGACTGCAAAGCCCAAGGCCCAGGCCTCTGCGGAGAAGTCTGAGGCCAGGAAGCCAGAGGTGGCCAAGGAGGAGGAGGGAGCCACCAGCTCCACCAGGGTCCCAGCAGATGGCCTGGCCGCAGAGCCTGACTCTTTGTTTGCCTTGGACGTTCTGCGGCAGCGCCTGCATGAGAAGATTCAGGAGGCACGGGGCCAGGGCAGCGCCAAGGAGCTGTCCGCCGCTGTTTTGGAGAAAAGACGCCGGAGGAAGCAGGAGCGCGACCGGAAAAAGAGGAAACGGAGGGAGCTGAGAGCAAAGGAGAAGGCGGCCAAGGCACTGGAGGGGGCAGAGGCCACCGAGCCGGACCTTCAGGTGCCCAGGGAGGAGGCGCAGGCCCAGCCGGGGCTGCTCTTCAACAAGGTGGAGGTGACCGAGGAGGAGCCGGCCAACAAGGCCCAGCGCCGGAAGGAGAAGAGGCAGAAGCTGAAGGGGAACCTGACACCGCTGACGGGCAGGAACTACCGGCAGCTGCTGGAGCGCCTGCAGGCGCGGCAGGCCCGGTTGGAGGATCTGCGGGACCGGGACGCGGGGCAGGCCCAGGAGCTCGAGGCCAAGATGCGCTGGACCAACCTGCTGTACAAGGCCGAGGGCGTGAGGATCCGCGACGATGAGCGCCTGCTGCAGGAGGCCCTGAAGCGCAAGGAGAAGCGGCGCGCGCAGCGCCAACGCGCCTGGGAGAAGCGCACGGCGCACGTGGTGGGCAAGATGCAGCAGAGGCAGGACCAGCGGCGGCAGAACCTGCGCAAGAAGAAGGCGGCCAAGGCCGAGCGCCGCCTGGAGAAGGCTCGCAAGAAGGGCCGCATCCTGCCCCAAGACCTGGAGCGCGCCGGCCTGGCCTGAGGCCCCGGCTGCCCAGCCCCCATCTCGGGTCATGCAGGCTCCGGCGGAAAGTGGACTCTGCCACGTACCCCTCACCGGTTTGTCCGGGGCTCAGTACCCCCGTGCAGAAGAGCCTTCAGATCCGGGGAAGGGGCTGACCCGGATCCAGCTCCAACCTCTTATTAGACCAGAGGCTCTCTGCAGGTTGTGGGGTAGCGGCCCAGGGAGCTGTGAGAGGGGAGCGGGCACCTGGGGGGCTTTGCTGGCCGCCCCTTCCTCTCACTGTCGCAGGAGCAGGAAGGGCATGGCCTTTGTGACTGCGGTGTTGGCCCCAGGCGCGCTTGGTAAGGGAATAAGCAGCTCCTGCCGCAGAGCTACGGTGGAGGTGATGGGCTTGGTAACGGAGCAGGAGGGCGTCCTCAGGCGCCTGTGATTGAGTTACACAAGTTGATGTGGAAAGAGGGTAGAGAGTAGAATTTAAGGTGAAGATGGTTATTAAAAATTCTGACTACTAAAAGATAGTGTTATTGGAGTAGGAGGGAAAAGAAATTGGAGCTGGCTGGATAGTATCAGTCTAGGGGGAAGTGGGAGAGAAGGGGTAAAACCTGGAGAACTACGTGGATGGATGGAGGGTCCGCAGTGACGGACAGGTGAGTGCAAGCCCACAGGCAGGCAGCGTTGACACGCGCGGGTGAAGTGTGTGGTACGTGGGTTGTGTTTCAGGAAGACTTCGTAACATTCTTTAGACTAAATTCCAGTTAAGAAACAGATGGTAACCAAAAGGAAACTGGTGTGACTGTCATTAGATGACGATGTGTTACTAGAGTTTTAAAGGTATTGCTAGAGAGAAAGGATGTCACTGAATAGTGAAACAGGTTCAGATCACCTGGAAGGTAAACAGCCTTGCCCCAGAAACAGCTTCAGATCTGCCTAACAGAAGCTGACACTCTGCAAGGAGAAGTCAGTTCACAAACCAAGTGGGAGATGCTTAACATCTGCTCTAGGGACTGATGGTCAAGTAGACAAAATCAGATGGATCCGGAAGATTCAGATGAGAGTGTTTATAAGCTTGATCTAATGGACACACAGACCTGTGTACCTGAAAACTGTGTGTACTGGGATTTCCCTAGTGGCCCAGTGCTTTAGTTCAGTCACTCAGTCACGTCCAACTCTTTGCTCCCCCTTGGACTACAGCATAACACCAGGCTTTCCTGTCCATCACCGACTCCTGGAGCTTGCTCACACTCGTGTCCATCAAGTTGGTGATGGACTCTGTTCCAGTGCAGGGGTATGGGTTCAGTCCCTGGTTGGGAAACTAAGATCCTGGATTCCGCAGGGTGTGGCCACATTTTTTTTAAGAAATTAAAAAGAAAACCTCAAGCACACACGGAACAGTGGTGAAAACTGACCATCACCTGGTCCACAAAGCAAGTCATATTTCAAAGCTTCGGCATCGTACAAAGTGTGTTATTGGGCCATAAAACAGTTTTAAAATTCCAGAGGTAACTGTTAAAGTTACATGTTTGGAAGTTTAAAAACACACTTCTAAATTACCTGTCAAAGAATCCTCATAGATGTGAGAGACTGTTTAGGATTGGAAGATAACGGAAGTGGTGTGCATTAACATTTGTGGGCCTCAGCTGAGACAGTGCCAAAAGCACTTTATAGCCGCAAAGCTGTGCTTATGTGTATCCTTGGTTTTAAGTGTTAGCAGGTGAGTCCATCATGCGGCACAATTTTCTGCTTGACCTAGAGCCTCACTCCTGGGCTCTGTTGACCCGCTCTGCCCCAGGCAGTTGCTCCCAAATTAATGTCCACACGTTGCAGTCAGGAGAGTTGGGAGAGTGTAGCCCCCTGTGGGAGTTGAAGGAGCATCTCCCAAGGCCTGGTGGGTATGTGTCATTGGGTATTCCGCTCCTTCCTCTGAAGCCTGGAAGGCCAGGAACCACGCCCCTCCACCCTAGAGTGCTGCTGTGGCCTAGTGTCATGTAGCTCGTGTGCAAAGCGAGCAAATGGTGCGCTTTGGCGGCAGGTAGCATCAAGCAGCCCTGGACAATAGGAGTTAGAGGGAAGGAAGGGTGAGGAGGTATGGAGCATCCACCTGGTGGGAGACCGTCTGTGTCCAAGTATAGAACAACGCTGCAGCCGCCCTGGGCTGGGCCGCCACGCTCCTGTCTGACCCAGGGCTGGAAGCTGGTGGTGCACAGAAGCAAGGACGTGCCACACAGGACTCAGGGCAACAGAAGTATCTCACTTGCAGGGAAGAGAACATTACTGGTTGAGTCTAGGAAGCTTGATGCCAACTTCTTGGGTGCTGTGTGCCTCGAGTGCAGAAAGTGAAATGCAGAAAACTTCCAACAGGCCTCACATCTCATATTTTCAGGACCAAGTGACAAGAGTCTCAGAAGGCCCCCTTCCTGGTCTATCCAGTGAGTAGGATAAAAGTAACCCCTAACAGGACACATTCATGGACTGTGGCTCACGAGGATCTGGGTTCCAACAGTCCCGCAAAGATGGTACTCTTAGTCCACTGGCCCTCCTCGGGTGAAGCTGGGAAGAAGGCTCCCAGCCAGCCTTTCCTTCTGCTTGGGTGCTCCAGGACTTGAGTGAACTCGTGGTTAGAAATTCAGTGAGGGGCTGTAAGCAATTGAGTAGCTCAGTGAAGCTCTTGTTCACCAGAGCTGCCGTCCAGGTGCAGAGGGCAGAGACCTGTCTCCAGACCCCCATGGGCTGGCTCGTTTGGGTCATTGCACTGAGCACTAGCTTGGCCAACAGTTGAGGAACCTCACACAACCATGTCACAACATGTTCCCTGCTGCCCTCAGGTCCCCGGTCTGCACTGCCCCGGGAGCTTGGTTCTACCCCTGTGTCTCCCACGGCATTCCATCCAGCCTTCAAAGAGCCACTGTGGTGCCTCTCTGGTGCTTTTCCCAGGACCTTGGGAGAGGAGGAGTCTTCTATAGGCTCCCCAGCCTATGAGGTGGATGAGCAGGTAACACAGTTAAGACCCTCCAACAAGCCTGGCCCTCTACTGAGAGTTCTTAGCTCTTGTAAGTTATTCCTAGGGATTTCTGTAAAGTTCACTTAATCTTAGCTTGGGCCACTGTGGGTTCCAGGTTTTGGCTGAGCACCAAAGGAAGTAATGGGAACTTTTCCGGTTCCCTAGTCAGCCCACTAGACCTTGCTTCTGGAAGGAACCATATCTGGAACTGCACCACTCCTTTCTTGGCCAAGCACTTCTAGAATTAGTTCCCACATAGTTACGTGATTTTTTTTTTTTCCAAACTTTTTTTTCTTTTCTTTTTTTTAAGGGAGTGCTTCTCCCTTTAAAAAAAAAAAAAAAAGTTTATTTCTTTTTGGCTGTGTTGGGTCTTCATTACTGCTCAGGCTTTTCTCTAGTTGTGAATGGGGGCTCCTCTCTAAATAAATGGGCTTTATTTCAGTGGCCTCTCGTGCAGCACAGGCTCAGTAGTTGGGAGACACGGACTTAGTTGCTCTTTGCCATGTGGGATCCTCCCGGATCAGGGATTGAACCCGTGTCGTCTGCACTGGCTGGCAGATTACCACTGAGCCACCAGGGAAGCCCCTCAGACTCTTCTGACTTTGACTTTGTAATTGACCACATGGGTCCTGCTGAGATCTCTCATATATCAGTCTAGAGACAAGGTGAGATGGGGGTGAAATGGAGGAGACTGGTTTCACCTTGGAAGTGATGCCTCAGATGAGTTTTTAGATATGGCAGGGACTGATTTCTCAAGGTGGTCCTCGGTAGGTTGGATATTCAGGGTACCGGAGGTACCCAAAATTGTCCAAATACCCCAGTCTCAATTCCCAGGACTGATGAGTGCTCCAGCTCTCCCATGAGAGATCTGGTAAGGTTGTGAATTCACCTGTTGGTAGGATTTGCTAGTGAACTAGCAAAACTTCAGTTTTCTGTTAATTCAGTCTTGGCAGTTGCAAACTCAGAGATTCTTCTACAAAGTAAGAGAAAGTTCCTGATTCTCAGCTCTTGCCTTGACCTAAAACTTTAGGACTTTGAGCCTGTCGTTGTCTATTGACTACCCAGCACTGTTAAGGGAGACCTCCCCATCCCCAGTCGCCTTGAGTAGTCCTTGAGTTTCTCAAGTCTTACTGTTTTTAAGGTGGTGTCAGCTAGAACTTTTCCGGTTCCCTAGTCAGCCCACTAGACCTTGCTTCTGGAAGGAACCATATCTGGAACTGCACCACTCCTTTCTTGGCCAAGCACTTCTAGAATTAGTTCTCACATAGTTACGTGATTTTTTTTTTCCAAACTTTTTTTTCTTTTCTTTTTTTTAAGGGAGTGCTTCTCCCTAAAAAAAAAAAAAAAGTTGATTTCTTTTTGGCTGTGTTGGGTCTTCATTTTGTCTCTGGTGTCCACATCTCCAGATAAGTGTTTTGTAGCTGTGTACCAGTACATCCAGGGTCCCCTCCCTTGGTGCTGTCTAGATGGCTACCCTCTGCTAAAATCATAGGCTTCCCAGGTGGCGCTAGTGGTAAGGAACCCACGTGCCAATGCAGAAGACATAAGAAATGTGGCTTCAGTCCCTAGGTTGGGAAGATCCCCTGTAGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCACGGACAGAGGAGCCTGGTGGGCTACAGCCCATAGGGTTGCTAAGGGTCAGTACGACAGAAGCGCCTTCGCATACACAGCTAAAATCCAGCCAGATAACAAATCCCAGGTTTTCCCTGACTCATCCATGACAGGTCATGTTGTGTTGTGTTCACAAAAGTGCTTTTTAACAAAACGTAGTTAAAAGCCACGCTGATGACTGGATATGTCTTAGCAACTAGGAATAGAGGAAAGTGTCCTCAACTGGGTAAAAGTTTACCAAAAGTGTAAAAATACCATCATATTTAATACCGTCATCAGAGTTTTCTTGCTAAGATGAAGAACAAGGCAAGAATGTCTCTTCTCATAGCTGCTTTTCAGTGTCACACTGGAAGTCCTAGCACATGCAATAAGACAAGAAAAATAAAACATGCAGATTGGGAAGGAAGAAGTCAAACTGTCTTTGCAAATTACATGATCATCTATATAAACATCCAAAAGATGACAAAACCTGAAACGCATAAGTGACTATATCAGGGTTGCGGGGTACAAAGTAAACATGTAAAAGTCAGCCGCTTTCCTGTATACCAGTAATGAACAAGTGGACTTTAAAATCAATAACATTATCATTTACACTGTGAAAATCAATATAAGCATTCCTCAGATATATTGCCATTTATTGCAATATCCAGATATTGCATAGACCACCACAATAAAGTGAATATTGCAATAAAGTCACACCTTTTTCTTTTGTTTCCCAGAGCATATAAAAGTTATGTTTACACTATATTGTGGTCAGTTATTAAGTGTGCAATAACATTATGTCTAAAAAAAATGCACATACCCACACCTAAAAGTTTTAAAATATTAGCAAAAAATGCTACCCGTCATCTGAACCTGCAGTGAGTTGTATTAAAATCAAAGATCACAGATCACTGTAACAAATACAATAACAGTATAAAGTTTTCTTTCAAGATTGTGAGAGGTGCAAAACGGGACATAGAGGCGTGAAGTAAGGGAACGCTGCTGGGAACATGGTGCTGACGGACGCTTGACGCGCCAGCCTTCAGTTTTTAAGGAAGCAGTGTCCTTGACGTGGAGTAAGGTAAAGTGCAGGAAGAGGTGTGCCTGTAAAGGGCGATCTCGCTGACACGGAACTGGAAGGACAGAAGCAGGAGCTCTCATGCACATATCACTCAATACAGTGTCAGTAGGAGCTGGGCCTTGCCTCTCAGGCAGGAATGACCCCACTACTGCCAACAGGAGGGAGAGAGAATTTCTCCTTGCCTGGTGGTAGCTCAATGTCAGGCTGTCACAACTCAGCTGATGAAAATCCACTGTACGTCAAGTCCCAGTTTACTCCAATGGACATATAATTTTTAGTAGCCCTTTCCAACTTCCCCTTCTGCTCTATAAAAGAGTTTCCTTGCAACTTCCATGGTGGCCTGGTGGTAAAGAGTCTACCTTGCAATGCAGGGTATGTGGGTTCAAACATTGGTCAGGGAACTAAGATCCCATATGCCATAGGGCACCCTAGTCCACAAGGAAGAGCTGCTGAGCCCGTGCACCACAACTAGAGAGTCCATGCACTGCCAGGAGAAGGTCCCATATGAC EMBV3_08642 CCTTCTGCCGTTGTCTTGCGCAGTGTGTGCTCTGGGGCTGTTTTCTTCTGAAATGTCTGT Gene GeneID:539767|RASSF5:NM_001113760:97_cdna UTR3_Alt 2 NULL GeneID:539767 16 GENE RASSF5 NULL Ras association (RalGDS/AF-6) domain family member 5 EMBV3_01612 CCTGGAGGAGGACCAGAAGAAAGAGACGACGGCCAAGAAAGTGGGCACAGAAATCTGCAA Gene GeneID:281974|PDE6B:NM_174418:10_cdna Constitutive 0 NULL GeneID:281974 6 GENE PDE6B NULL phosphodiesterase 6B, cGMP-specific, rod, beta EMBV3_42527 AGACCCCCAAAAAGCGACGAAAGTCGCGCACAGCCTTCACCAATCACCAGATCTATGAGT Gene GeneID:534470|LBX1:XM_002698438:419_cdna Constitutive 0 NULL GeneID:534470 26 GENE LBX1 NULL ladybird homeobox 1 EMBV3_17299 TCTTTTTCCCTTCTTGGCACAGGAGCAAATGCAGCTAGACTGGAGGGTCTAGTAAGTGCG Gene GeneID:613867|LOC613867:XM_002690239:49_cdna Constitutive 0 NULL GeneID:613867 9 GENE LOC613867 NULL similar to trace-amine-associated receptor 7a EMBV3_20149 CCGACTCAGAGCCTGGATTGTTGTGAATTATGAGCTTTGTGTTTGTCTTGTTTGGTGCAG Gene GeneID:530077|LOC530077:XM_002687042:137_cdna Constitutive 1 NULL GeneID:530077 4 GENE LOC530077 NULL similar to GTPase, IMAP family member 5 EMBV3_09634 ATATGTTGTCTACAAGAGACCCACCTCAAACAGGGGACGCATACAGACTGAAAGTGAAGG Gene BVV0102_178181 - 0 NULL GK000002.2:29428856-29855006 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40913 CACCCCAGGAGCCATGGCCAGTCCTCTTTTTTATCATCTGCATAGTATATTCTCCAGTGT Gene GeneID:614170|DCAF17:XM_002685301:120_cdna Constitutive 0 NULL GeneID:614170 2 GENE DCAF17 NULL DDB1 and CUL4 associated factor 17 EMBV3_39464 CAGCCTGACTCCGCAGGCTACACGGCTCTAGCTGCCGAGAAGGGTCACGTGGACATCTGC Variant GeneID:510840|ANKRD39:NM_001075471:44_cdna 232^435 2 EMBV3_06544 GeneID:510840 11 GENE ANKRD39 MGC142444 ankyrin repeat domain 39 EMBV3_23235 CAACAGCCACTAGTGGGTTTGCCAGTGGAAAATCTACATCAGGAGACAAGGCTGTATCAC Variant GeneID:532597|WAC:XM_002692128:87_cdna 607^915 3 EMBV3_34089 GeneID:532597 13 GENE WAC NULL WW domain containing adaptor with coiled-coil EMBV3_12935 CCCTCATCTGTTCTAGATCTTGCCTCTTTCTTTGCTCCCCGTGAAAGCAGCATACATTGT Gene BVT0102_151446 + 0 NULL GK000019.2:46071154-46081234 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097351 TCONS_00097349 TCONS_00097350 TCONS_00097352 1 XLOC_058228 Coding TCONS_00097352 XLOC_058228 Coding Coding NSF 19:46080349-46228623 = TSS72153 3977 1 TCONS_00097352_5 752 21 0.973319485004013 0.00391954606553356 0.00137254382344798 0.00273058257738474 0.0028625878206875 0.00536446840993387 0.00105292318517699 0.00262488358364405 0.00171138933979538 0.00401872182262603 0.00159565025373993 0.000145457342815648 3.29723587805953e-05 9.34429857539811e-08 2.92136955947968e-06 0.000759335955714571 0.00493235568213896 0.000447950473221654 0.000452401691694984 0.00367041038555391 0.00385036349363944 0.00173125339700639 0.0012556556533214 0.000310667734954385 0.000988266659061528 0.00329352247173773 0.00453571393908066 0.00323195760806256 1.44401223784491e-05 8.83139002812744e-05 0.000254616612408248 XM_002696057.3 NSF PREDICTED: Bos taurus N-ethylmaleimide-sensitive factor (NSF), 0.0 7108 100.00 0.990696504903193 NM_006178.3 NSF Homo sapiens N-ethylmaleimide-sensitive factor (NSF), transcript 0.0 4423 84.58 0.999497108373146 TCONS_00097352_5 sp|P46459|NSF_HUMAN NSF_HUMAN Vesicle-fusing ATPase; 0.0 1523 99.06 0.988031914893617 16 coding 0 0 0 0 -1.646178705208 0.0185623930012593 -0.102954522203534 0.260732969018752 GGCGGCTGCGCGCCTGCGCGAGGGCGGGCAGCGGGCGCGCGCGGCGGGGGCGGGCTCTGCCTAGTGCCGAGCTGCGGCGAAGGAGCCGGACGTGTCCGCGAAGATGGCGGGCCGGAGTATGCAAGCTGCAAGATGTCCTACAGATGAATTATCTTTAACTAACTGCGCAGTTGTGAATGAAAAGGATTTCCAGTCTGGCCAGCACGTGATTGTGAGGACCTCCCCCAACCACAGGTACACATTTACACTGAGGACACACCCATCTGTGGTTCCAGGGAGCATTGCATTCAGCTTACCTCAGCGAAAATGGGCTGGACTTTCTATTGGACAAGAAATAGAAGTGTCCTTATATACCTTTGACAAAGCCAAGCAGTGTATTGGCACGATGACCATCGAGATTGATTTCCTGCAGAAAAAAAGTATCGACTCCAACCCGTATGATACTGACAAGATGGCCGCAGAATTTATTCAGCAGTTCAACAACCAGGCATTCTCAGTGGGTCAACAGCTTGTATTTAGCTTCAATGAAAAGCTTTTTGGCTTACTGGTCAAAGACATTGAAGCCATGGATCCTAGTATCCTCAAGGGAGAGCCTGCAACTGGTAAAAGACAGAAGATTGAAATAGGGCTGGTTGTTGGCAACAGTCAGGTTGCATTTGAAAAAGCAGAAAATTCATCACTCAATCTTATTGGCAAAGCAAAAACCAAGGAAAATCGCCAGTCCATCATCAATCCTGACTGGAACTTTGAGAAAATGGGAATAGGAGGTCTGGACAAGGAGTTTTCAGATATTTTTCGACGAGCATTTGCTTCCAGAGTATTTCCTCCAGAGATTGTGGAACAGATGGGCTGCAAACATGTTAAAGGCATCCTGTTATACGGGCCTCCAGGTTGCGGTAAGACCCTGTTGGCTCGACAGATTGGCAAGATGTTGAATGCAAGAGAGCCTAAAGTGGTCAACGGGCCGGAAATTCTCAACAAATATGTGGGAGAGTCAGAGGCTAACATTCGTAAACTCTTTGCTGATGCTGAAGAGGAGCAAAGGAGGCTTGGTGCTAACAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCATCTGCAAGCAGAGGGGGAGCATGGCTGGTAGCACAGGGGTTCATGACACCGTTGTCAACCAGCTGCTGTCCAAAATTGATGGCGTAGAGCAACTGAACAACATCTTAGTCATTGGAATGACCAACAGACCAGATCTGATCGATGAGGCTCTCCTTCGACCTGGAAGACTGGAAGTTAAAATGGAGATAGGCTTACCAGATGAGAAAGGCCGATTACAGATCCTTCACATCCATACAGCAAGGATGAGAGGGCATCAGTTACTCTCTGCTGACGTAGACATTAAAGAACTGGCCGTAGAGACCAAGAACTTCAGCGGCGCTGAACTGGAGGGTCTGGTGCGAGCAGCACAGTCCACTGCTATGAATAGACACATAAAGGCCAGTACTAAAGTGGAAGTGGACATGGAGAAAGCAGAGAGCCTGCAGGTGACAAGAGGGGACTTCCTTGCTTCTTTGGAAAATGATATCAAACCAGCATTTGGCACAAACCAAGAGGATTATGCAAGTTACATTATGAATGGTATCATCAAATGGGGTGATCCAGTTACTCGAGTTCTAGAAGATGGGGAACTTCTGGTTCAACAGACTAAAAACAGTGACCGCACACCACTGGTCAGCGTCCTCTTGGAAGGCCCTCCTCACAGTGGGAAGACAGCTTTAGCTGCTAGGATTGCAGAGGAATCCAACTTCCCCTTCATCAAGATCTGTTCTCCTGATAAGATGATTGGCTTTTCTGAGACAGCCAAGTGTCAGGCCATGAAGAAGATCTTTGATGATGCATACAAATCCCAGCTCAGTTGTGTGGTTGTGGATGACATTGAGAGACTGCTTGATTATGTCCCTATTGGCCCTCGATTTTCTAATCTGGTACTACAGGCTCTTCTTGTGTTACTGAAAAAGGCGCCTCCGCAGGGTCGCAAGCTTCTTATCATTGGGACCACGAGCCGCAAAGATGTCCTTCAGGAGATGGAAATGCTTAACGCCTTCAGCACCACCATCCATGTGCCCAATATCGCCACAGGGGAGCAGCTGCTGGAGGCTCTGGAGCTATTGGGCAACTTCAAGGATGAAGAACGCACCACAATTACACAGCAAGTCAAAGGGAAGAAGGTCTGGATAGGAATCAAGAAGTTACTAATGTTGATTGAGATGTCCCTACAGATGGATCCCGAATACCGTGTGAGAAAATTCTTGGCCCTCTTAAGAGAAGAAGGAGCTAGCCCCCTCGACTATGATCATGAACTATTTTCAAACGCAAAGTGACCAAGCAAAGTGACCAAGGTGAAGACGGCCTGGGATCATCACTCGACCTCCTCGAGATACTGAACACAGTGAAATGAACCCTGCCTTCGACACGTGCTCACACTGCATGACGAGTGCAATGAAACTCCCTTCCTTGTGCTTACTGAGATACTCCCTCTTGTGGAAGGTGTAAATTCGCTTTAAAATGCTGTGCTCAACTCTCCGTGTAAGCTGATTCCTTCTTGCTCAATCTTAAATGTGGGAAACATACTGTACTTATGAACACTACACGTTCTAAGCTCCCTACCACCACCACCCGAAAACTCTCAATAAACATACTGATGTTGCAAAACAGCAGTTGGCCTAATAGAAGGAAGACTTTCCACCTGTAAGCTAGGAGCCGTGACTAGAGGCACCGGGTTCAAAGGGATTCTCTCACAACTTCCCTGTGCTAACTACACTATAGGTCATTGGATATTTGGTTCAAGTTTCTCCCAGAAGGCTAGTTATCTTTGCCTGAAGTGTTAGGGCTATGAATTTCTAAGATGCTGTTCTCGATCATTTTCAGAGATGTTTCTAGGTTGCAATCAGGAGATCTTTCTTAATAGGAAGTCAGATTATTACCGTGTTGGCTGTGCCATCCCTTTAATGCAAGTGATGTGCTCAGCAATAAGAGAGAACGCTGGTCATTACTACTTAGTAGATGTTGTTAAGAACCTGTGAGAGATGTGTATGGTAAAAGCATACACCCCAAAACAGAAAGGTGTCAACTCAAGTAACTTCCAACCCTCTCAGCACTCATTAGTGCCCAGGTCTAAGTGGGTCCATAATACTAAAGGCTTCTTTAGTATCACCACTTTTCTTCTGTCCTTAGCTTAACGACTTACTTAGAATGTATCCTTCCTTTATTTTAAATTATCTGTACTCCCTAGCATCTAAATAAAACACTATTTTCCGGAAAAAATAAACCACTTTCTAGCACACTCTCCTCAGTCCTTCAACATCCATTCCAATGTACTGAAGATGTCTCCTTCCCCCTCTGCACGCTTCTTCCAAAGGGAAGGAGAACAGTAGTTTAAGCTGAGTTGGAAGAAATGTGATCAGGTCGTTATGTTCGGTGAGAAGACTTGCAGAACATGCGCCCCTCCCCCGCTGCTGCTGCAGCTTCAGCTTCGAGGACAGGCACCACCTGAAGGTACTTAATGCAGGGCTGGCACCAGGTGGCACTTGGGTGTCACCACGGTGGTCCGTGGTGCAGCTCTCTCATCTGTCCCTGTGGTAGAGGATAAATTATCTCCAGATCTTGCTCTCTGTATATTTTTGGTAGATTTATATGTTGCATCTGCTTTCTTTTGGGTTTTCATCTCTAGCTTATTGTGCGGCTTAAAAAAAGTGGATTGTATTGTAAAAATTCTGTGGTTCCTGGTGGCCAGTATCCTGGATCCCCTCATCTGTTTTAGATCTTGCCTCTTTCTTTGCTCCCCGTGAAAGCAGCATACATTGTATTAACTTATGTCTCTTGTTAAATAAGGTTAATGTCTTTGTGTTTTGTCCAGAACTATATTGAAGAAATGCAAATATTATATTGTTTAATGCAAATGAAGGAATGCAATAAAGAGTACGTATACTTGAAAAC EMBV3_17032 CTGAGCATCCTGCGTGGAGCACCCCCGCACAGCCCCCCGATGTGTGACGAGCACGTCTTC Variant GeneID:614507|RAB15:NM_001046538:205_cdna 814^998 1 EMBV3_28885 GeneID:614507 10 GENE RAB15 MGC137938 RAB15, member RAS onocogene family EMBV3_08411 CAGTCCATTCCACCAGGCTTCTCCAGGGCCCAACCACTCAGAACTTACAACCTATTCACT Gene GeneID:100335935|LOC100335935:XM_002692151:164_cdna Constitutive 0 NULL GeneID:100335935 13 GENE LOC100335935 NULL hypothetical protein LOC100335935 EMBV3_00430 CACTTTCCGGGAGATGCGCCCCAACCTGCGGAGTCTTGCCGTGTGCGTCGAGGAGGTCAC Gene GeneID:280880|NPB:NM_173944:12_cdna Constitutive 0 NULL GeneID:280880 19 GENE NPB NULL neuropeptide B EMBV3_23918 TGGGAGGGTTTGCCTGGGCAGGTAGCTCTTGTTTCCGAGTCTCTAGTCCTTAGTCAGAAA Gene BVV0102_045316 + 0 NULL GK000005.2:57162027-57167133 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192019 TCONS_00192012 TCONS_00192015 TCONS_00192020 TCONS_00192016 TCONS_00192005 TCONS_00192018 TCONS_00192011 TCONS_00192010 TCONS_00192017 TCONS_00192009 TCONS_00192013 TCONS_00192007 TCONS_00192014 1 XLOC_117075 Coding TCONS_00192007 XLOC_117075 Coding Coding BAZ2A 5:57127044-57166556 j TSS143780 13130 1 TCONS_00192007_11 1502 0.0146230007616146 30 0.668446761661309 5.99833538729346e-05 6.96871839000909e-10 2.30643984228429e-09 0.000293350052365166 5.66237612900607e-05 5.2246982165752e-05 3.56581182684749e-09 7.31866371477959e-05 9.53313165111929e-10 1.27862794006334e-09 3.18446548429314e-05 0.000177708624913211 6.36496753459561e-06 0.000252655124919249 6.50713972578936e-05 0.0026841716967563 0.00100356852103076 0.000231321715535999 1.37823768094768e-06 6.49577844147631e-10 3.10053584273302e-13 0.000144107520993992 0.000588280542628275 0.000234648986551745 2.53328187453557e-05 2.8363708608879e-10 1.29955967427659e-05 0.000210424819865843 6.30044156964976e-05 0.000228962631381009 XM_005206543.1 BAZ2A PREDICTED: Bos taurus bromodomain adjacent to zinc finger domain, 2A (BAZ2A), transcript variant X1, mRNA. 0.0 1.534e+04 99.52 0.654379284082254 XM_005268600.1 BAZ2A PREDICTED: Homo sapiens bromodomain adjacent to zinc finger domain, 2A (BAZ2A), transcript variant X5, mRNA. 0.0 9083 89.01 0.524600152322925 TCONS_00192007_11 sp|Q9UIF9|BAZ2A_HUMAN BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A; 0.0 2488 89.09 0.999334221038615 0 coding 0 0 1 1 0.0114185913659827 0.920167607962351 -0.0125687158903251 0.823057141170732 GGCTGTGGTTCGCAGGAAGCATACATTGGCTTTTTGATTCGTGCTAGTTCCCAGCTCATAGTTTGGGAGGATCTAACACCAGCCTGCACGTGAAGGGGGAACCAAGGACAGTGAGGAGCTGGTGGTCCCAGCCCTGGAGCCCTGCCAGCCTGACATGAGAATCTTCCTGACCCTCAGGGTCCTGCTGATGTCGCCGGGAAATTGGTGATACAGGCAGGACCGGGCTGCCATCCACGGGGCAGAAATGGAGGCAAACGACCATTTTAACTTTACTGGCCTTCCCCCTGCACCTGCTGCCTCAGGACTGAAACCCTCTCCCTCCTCAGGGGAGGGGCTCTACACTAACGGGTCTCCCATGAACTTCCCCCAGCAAGGGAAAAGTTTGAATGGGGATGTGAATGTTAATGGCTTATCTACTGTATCTCACACTACTACTTCAGGGATTTTGAACTCTGCTCCCCACTCCTCCAGCACCTCACACCTCCATCACCCCAACGTGGCCTACGACTGTCTCTGGAACTACTCACAGTACCCATCTGCCAATCCTGGCAGCAACCTCAAGGACCCACCCCTTCTCTCCCAGTTCTCGGGGGGACAGTACCCACTCAACGGCATCCTTGGGGGCAGCCGGCAACCTTCATCCCCAAGTCACAACACTAACCTTCGGGCTGGGAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTCCCATGGGGCTTAACTTCGATTCACAGGAACTCTATGATTCCTTTCCCGACCAGAATTTTGAGGTGATGCCCAATGGACCCCCTAGTTTTTTCACCTCCCCACAGACTTCTCCTATGTTGGGATCCAGCATCCAGACCTTTGCACCCTCCCAGGAGGTAGGCAGCGGTATCCATCCTGATGAGGCAGCAGAAAAGGAACTTACTTCCGTCGTGACAGAGAATGGTGCTGGCTTAGTAGGCAGCCTGGAGCTGGAAGAAGAGCAGCCAGAACTAAAGATGTGTGGCTACAACGGCTCCGTCCCTTCTGTGGAATCATTACACCAGGAGGTCTCAGTCTTGGTCCCTGATCCCACAGTGAGCTGCTTAGATGATCCTTCACATCTTCCTGATCAACTGGAAGACACTCCAATCCTCAGTGAAGTCTCTCTCGAGCCCTTCAACACTCTGGCACCGGAGCCAGTGAGTGGAGGACTCTACGGTATAGATGACACGGAGCTGATGGGTGCAGAGGACAAGCTGCCTCTGGAGGACAGCCCTGTGATATCTGCCCTTGATTGCCCTTCCCTCAATAATGCCACTGCCTTCAGTCTCCTGGCAGATGACAGTCAAACTTCAGCCTCTATTTTTGCCAGCCCCACCTCTCCACCTGTCCTCGGGGAGTCTGTTCTGCAAGGGTCATTTTTCCTTTATCCATCCTGTCCCTTTGGATTCTAGATAATAGCTTTGACCTGAATAATGGTAGTGATGCAGAACAGGAAGAAATGGAGACTCAGGCTTCAGACTTCCCACCTCTGACCCAGCCAGCCCCTGACCAGTCATCCACTATTCAGCTACATCCAGCAACCTCGCCAGCAGTCTCACCAACAGCCTCCTCAGCAGTCTCCCTGCCAGTGTCTCCAGCAGCCTCTCCAGAAATTTCCCCAGCCATCTCCCCAGCAGCCTTCCCAGAGGTCTCTCCAGCTTCCTCAGCAGCCCTCCCACCAGTCTCCTCCGAAGTCTCCTTGACAGCCTCCCCAGTGACCTCCCCAAAAGCCTCCCCTGCAGCTTCCCCGGCAGCTGTCTTTCCGACAGTCTCCCCAGCAGACAAGGATATCAGCAGCGTACCTGAAACAATTGCTGACCTGGAAGACACCACTGTAGAAGGAGTCCCTCCCTCTGGTAGCGGTGATGTCCTGAGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGATGGCGGAGAGAGGTGCGCATCAAGAAGGGCAGTCACCGATGGCAGGGGGAGACCTGGTATTACGGCCCTTGTGGGAAGAGGATGAAACAGTTCCCGGAAGTGATCAAGTACCTGAGCCGCAACGTGGTACACAATGTCCGTCGGGAGCACTTCAGCTTCAGTCCCCGTATGCCTGTTGGTGATTTCTTTGAAGAGAGAGACACACCAGAGGGCTTGCAGTGGGTACAGCTCTCAGCAGAGGAGATCCCATCCAGGATTCAGGCAATTACTGGGAAACGGGGCCGACCTCGAAACACTGAGAAGGCCAAGACCAAGGAAGTCCCCAAGGTGAAACGGGGCCGAGGTCGGCCACCCAAGGTCAAAATCACTGAGCTGTTGAATAAGACAGACACCCGCCTCCTAAAGAAACTGGAGGCCCAAGAAACACTGAATGAGGAGGATAAAGCAAAGATGTGTAAAATCAAGAAGAAGATAAAGCAGAAGGTGCAGCGGGGAGAGTGTCAGACTACTAACCAAGGGCAGGCCAAAAACAAGAGGAAACAAGAGACCAAGAGCTTAAAGCAGAAGGAAGCCAAGAAGAAATCCAAGGCTGAGAAGGAGAAGGTAAAAACAAAGCAGGAAAAACTGAAGGAAAAAGTCAAGAGGGAGAAGAAGGAGAAGGTAAAAATGAAGGAAAAGGAGGAGGTGGCCAAGACCAAGCCAACGGGTAAAGCAGATAAAGTGCTGGCCACACAGAGGCGCTTGGAGGAGCGGCAGAGGCAGCAGATGATCTTGGAGGAGATGAAGAAGCCCACAGAGGACATGTGTCTGACTGACCACCAGCCGCTGCCTGACTTCTCACGCATCCCTGGTCTGATCCTGCCTAGTGGGGCCTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGCACAGCTTCGGCAAGGTGCTGGGCTTTGACCCTGCCAAAGATGTCCCTAGTCTGGGGGTCCTGCAGGAGGGGCTCCTGTGTCAAGGCGACAGCTTGGGCGAGGTGCAGGATCTCCTGGTGCGACTCCTGAGAGCAGCTCTCTGTGACCCTGGCCTGCCCTCCTATTGTCAGTCCTTAAAGATCTTGGGGGAGAAGGTGTCCGAGATCCCACTAACAAGAGACAATGTGTCTGAGATCCTGCGCTGCTTCCTCATGGCATATGGAGTGGAGCCAGCCCTCTGTGACAGCCTGCGCACCCAGCCTTTTCAAGCCCAGCCACCCCAACAGAAGGCTGCTGTTCTGGCCTTCCTTGTGCATGAGCTCAATGGCTCCACCCTCATCATCAATGAGATTGACAAGACTCTAGAGAGTATGTCCAGCTACAGGAAAAACAAGTGGATTGTTGAAGGCAGGCTGCGGAGATTGAAAACTGCTTTGGCCAAGCGAACGGGGCGACCTGAGGTAGAGCTACAGGGGCCAGAGGAAGGCCTGGGGCGGAGGCGCAGTTCTCGGATCATGGAGGAGACCAGTGGCATGGAAGAGGAGGAAGAGGAAGAGACTGCAGCTGCTGTCCATGGCCGTAGGGGTCGAAGGGATGGAGAGGTTGATATCACAGCATCTAGCATCCCAGAGCTAGAGCGCCAGATAGAAAAACTGAGCAAGCGTCAGCTCTTCTTTCGAAAAAAGCTGCTTCACTCATCCCAGATGCTTCGAGCAGTCTCCTTGGGTCAGGACCGCTACAGACGCCGCTACTGGGTGTTGCCCTACTTGACTGGTATCTTTGTGGAAGGAACAGAGGGAAGCTTAGTTCCTGAGGATGTGATAAAACAGGAAACTGACTCCTTAAAAGTGGCAACCCATTCAACAACCAGCCCAACCTCCTTCTCTCTGAAGAGGGAGTTAGCTGGCTCCAGCACCTCTGCCAGTTCTCCTGCCCGGGCCCGAGGCCGACCTCGGAAAACTAAGCCTGGCTCTATGCAGCCTAGGCACTTGAAATCTCATTCCAAGGGTCAAGGTTCAGAAGAGCCTCAGACCCAGCTTCAGCCTGAGACTCAGTCCCATCCTCAGCTTCAGGCTCATGCCCAGCCCCAGCTTCAGTCCCATCCTCACACTCATAATGGGTTCCTGGAGCCAGAAGGCTCCCCATTGTCTCTGGGTCAGAGCCAGCATGACCTCAGCCAGTCAGCCTTCCTGTCTTGGCTGAGCCAGACTCAGAACCATGGCTCCCTGCTGAGCAGCTCAGTCCTCACGCCTGATAGCAGTCCCGGAAAACTGGACCCAGCCCCATCACATGCCCCAGAGGAGCCAGAACCTGACGAGACAGAAGCCAGCCCTGATTCTCAAGCTCCCTGGTTTAATTTCTCAGCCCAGATGCCCTGCAATGCTGCCCCTACACCACCCCCTGCAGTTTCTGAGGACCAGCCCACTCTTTCCCCTCAGCTACCTGCTTCTTCCAAGCCAGTGAGTAGAGCCAGTGCTGCCAACGCCTATTCTCCAGGGCCATTCTCTTCTACTCCTTTGCTGGGCATGGCTCATAAAAGGCAAGCAGGAGATCCTGGAGAAACACCACAGAGCCCCACAGGGCAAGGACAGCCAAAACGAAGAGGGAGACCTCCCAGTAAGTTCTTCAAACAGATGGAGCAGCGCTATCTAACCCAGCTGACAGCCCAGCCTGTCCCACCTGAGATGCGCTCTGGCTGGTGGTGGATCCGAGATCCTGAGACATTGGATGCCACGCTCAAGGCCTTGCACCCCCGAGGCATCCGAGAGAAAGCACTTCACAAACACCTAAACAAGCACAGGGACTTCTTACAGGAAGTCTGCCTACGGCCCTCAACAGACCCCATCTTTGAGCCCAGTCAGCTACCTGCCTTTGAAGAAGGGATCGTGAGCTGGACCCCCAAAGAGAAGACATATGAGACAGACCTGGCTGTCCTTCAGTGGGTGGAGGAGCTGGAACAGCGGGTGATCCTGTCTGATCTGCAGATTCGGGGCTGGACATGTCCCAGCCCAGACTCTACTCGTGAAGACTTGGCCTACTGTGAGCACCTAGCTGATTCCCAGGAGGATATCACCTGGCGGGGTCGAGGCAAGGAAGGTCTGGCACCCCAGCGTAAAACTACCAACCCCCTGGACCTGGCAGTGATGCGACTTGCTGCCCTGGAGCAGAATGTGGAGCGGCGGTACCTGCGGGAGCCCCTGTGGCCAGCTCATGAGGTTGTGCTGGAGAAGGCCCTGCTCAGCACGCCCAGTAGTGCCCCACAGTGTACGCCTACAGAGATATCATACGAGATCACCCCTCGAGTTCGGGCCTGGCGCCAAACGCTAGAGCGATGCCGGAGCGCAGCCCAAGTCTGCTTGTGCCTGGGCCAGCTGGAGAGGTCCATTGCCTGGGAGAAGTCTGTCAACAAAGTGACCTGTCTAGTCTGCCGGAAGGGTGACAACGATGAGTTTCTTCTACTTTGTGATGGGTGTGACCGTGGCTGCCATATTTACTGCCTTCGGCCCAAGATGGAGGCTGTCCCAGAAGGAGACTGGTTCTGTGCTGTCTGTCTGGCCCAGCAGGTAGAAGGAGAATTGACTCAGAAATCTGGTTTCCCAAAACGAGGCCAGAAGCGGAAAAGCGGTTATGTGCTGACCTTCCCAGAGGGTGACAACCGCCGGCGCCGGCTGCTACCAAGGGGCCGAGAGAGCCCAGCAGTGCCCCGGTACTCAGAGGAAGGGCTGTCCCCCTCGAAGCGGCGGCGCGTCTCCATGCGGAACCATCACAGTGATCTCACATTCTGCGAGATTATCTTGATGGAGATGGAGTCCCATGATGCAGCTTGGCCTTTCCTGGAGCCTGTGAACCCACGATTGGTGAGTGGGTACCGGCGGATCATCAAAAACCCTATGGATTTTTCCACCATGCGGGAGCGACTGCTCCGGGGAGGGTACACCAGCTCAGAGGAGTTTGCGGCTGATGCACTGCTGGTCTTTGACAATTGCCAGACTTTCAATGAAGATGATTCTGAAGTGGGCAAGGCTGGACACATCATGCGCCGCTTCTTTGAGAGCCGCTGGGAGGAGTTTTATCAGGGAAAACAGGCCAATCTGTGAGGCATGGGAGGTGGGGAGTCACCCTGTGGCATTGCCCCCTGCCCTCCACACAAACCCTGCCATTCTCACCTGCTGATGCTGCCCTGGGTCCAGACTCAAGTCAGAGGGAGAACCCTGATTTTTGACTCAGCCCTTGGCAGCGCCCTACATCTTCTTATCCTTACACCCTTTCTCCCTTTCCTCCTCTTGTTCCTCAGATAAGAGGGGCAGAGATGAGGTCCTTCTGGACCGAAAGCCAAAAAAGAAAAAATAATTTTTCCTTTCTGTTTTATTTCCTAATTAAATAAGAGGAGGAGGAAAGAAGCCCCTACTTCCTCCTCCCAGCTTCCTCACCTTCCTTGTACGTGCCCCAGCATTCTGGGGCTATTTAACAATAGCAATAGTTCTAGTGAATGTGTGAAACCGAGAAACACTCTGTACTGTGTGTGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAACTCCCAAGTGTGTCGAGCCGGACACCGGGCCCTGAACATGCTGCTTCCATGTTCAGTCCCTCCCCTGCTTCTCACTTTCTCTCTCCCCTCTCCCCTTCAGATTTGTCTCTCATCCAATAATGTAAAACTATGTGTACGGGTTCCTCCCTTCTCTTCCCCCAAATTTTTCCCTTCAAAGGAAAAAGAAGTTCAGAGGTCCCTGTCTTTCTCTCTGTCCTCATCTTCCTGCCAGTAGCTAGCCCCTCTATAATGTTGGATACTCCTCAAATGCTGAGTTTCTAGCCTTTTTTGAAACTCAGTAAACTGGGGAGAGGGCAGGGAGGCACCCTGGACCCTGGGCCTTCCAGCCTCCTTCCCCACCTCTTACCCAAACCTCCCTCTTGGGAACTCCTCAGGGACAACTACTGCTGAGTTCGGGCACACCCCAAGATGGAGGCCAGGTAGCAATCGACTGGCCTGAGACAGAGAGAGAGGTGTGTATGGGTGTGTGAGTGAGTGAGAGAGGATGTGATTGTGCCCCTGTTTTTGGTGGCATCCATTCAGTTTTTTCCCCAAGTATCTGTTCCCCATTGTTTCAAACCATTGAGACACCTTTCTCATTGTTTTAAACTATCACTTTGTCTTTGGGAAACCACAGGAACAGTTTTTCTGGGTCAAAGCTGTGTCTCTTCCCTCTCTCCCAGTCATTTCTGTTCCAGCCTCTTCAAACTGTGCAATCTTTTAGCAGGAACAACTTCTCCTTTCAGTAGCTCTGAGTCCTAAGCTTTTGCAGGGAGAGGGGTAGAACTGGATCTTTTCCTAATCCCATGAGCTTCTGTGGGTTTAGTTGTGCTCTTTCCCTTATCTCCTTTACATCCTGGGACCCCTTCCCCAGTAGCAGAGACCCCAGAGCACAAATGAGTAGGGAGGAGAGGCTCTGGGTCCACCACTGCCCTACATGTGACTATGCCCAAGTTAAGCCCCAACAGAGGAAAGCTGCTAACTCCCAGCTATAGCCATGGGCCCCTGGCCCCCTGCTTTCCTGCTCAGCAGAGCCCCTCCCATCAGAGATTACGGGTACTTGCACTGGGGAGGTGGCTGCTGGCTGGCCCAAGCAGAGAGCTGAGGCACCCAAGAAATGTTCCATTGGTGGGAGAGGGGGTGCCGGGTGAGGGGGAGCATTCCTGTACTTCTAGCAGCACTGAATTGCCACTGAAGGGGGTGGGGGCAGTGTAGGTCCTGGGGCAACCCCTTTCTTTCTTTATGCCCCTTCTACCCCTAGCCTATTTCTAAAGTCGCCTTTTCTGTCATATAAACCTCAGAACTTTTAATTTTATTTGAGATTTTTTTTTTTTTTTTTTGCTTTTAAATAAGAGGTGGATTGAAGAATATTTGAATTGACTTTATATTATGCATAAATATTTATATTTTATCTAAATAACTGCTCTGTAACAAACTTTGTGTTAGTCAAGCATTTGGAACTGTTATAGTTGGGGGCTCTTCTTTTTCCCCACGGCAGTTTTCCCCAGTATAAAATGTTCTAGATTAATTTTACTGTTGGAGGTTAGATGGACGGGGGAGTGAAGTTTCAATTGTTCCTGCTGTGTTCCTCTCCCAGCTCCATCTCTTTCCCTAGGGACCAGGCACTCTGAAGGTGGGGTGGAGTCCTAGCCTCAGTTTGGAATGGGGGTTGATGGGGGGGTGGGACAGGGCATGATCAAAGGGGCCATTTCTCACTTTTCTTTCTCATCTTCACTGCCCCTTGAGCTAGGTGGATTTTCTCTTCTTGACGAGAGTATTTGATAGGGAAGGCAAGTTTTAAAAGTAAATAAAACCCACCCCTACCCCTCTGTTTCCCTTCTCCCATCAGTCTGGTAACAGGAAGAAACCACACCATCAACACCAACAAATTTCCACGTTCCTTTTACAACAAAAGGGACTTGACTTTTTATATAACCAAATGTGGTGTTTTAGTGACTTTTTGATAATGTACAGTTTTTTGTGAATTTAAATTTATTTCTTTCTATATTTTTAGGACCAATCTCATTTTTAATAAGGTAAAAAAAGGAAAAAAAGTCTAGAGATAAAAAAAACTCCTGTTTTTGCCATGTGATGTTCCACAAGTGCAGCTGTAGAAAAGTGCTTGTCAGTTGAATAAAAACCACATTTGATAGAGACTCAAAAGACTCCGTGTATTTATCTTCCTTCAACAAAGGTTCTTGTAATTGCCTAAAGGGGAAAACTGGGTCGTGTCAGGGTGAGTATATGACTGGTTTGATGGAGAAGACAGCAAGCAGGAGAGCAGTGTGCCCCTAAGTGTCAACATTTCTCTCTGAACCTCCAGGCTTGGCCCTTCCTTTTCCAGGGGGCATCCAAGGCAGAATTTCTGTTTATGTGAATGAAACGGGTGCTTCTGGCTGAGGTGCTGTAACAAAGGATTCAAGTGTGCCGAGTTCCTACCTTGTGAGGCATGGCCTTGGCTTTCTAAGGCTGCCACCTGTGTTCCTGATACAGGAAAAGTATGTGCTCATCACCACCTTCCCCAGCTTCCCACCCATGGATAAGACACCACGAGGTAGATTTTGTGTTTTATTCCACAAGTTGAAATAAGAGAAAGTTCTACCAAATTATAGGGAAGAAACATGAGAATACCAAGGGTCAGAAAATTAGAGTGGGCAGCACTGGCACAAACATGGCAAAAGTATAAAATGAGAAACCTCTGGATAAAGAAAAACTGTACAAAATGTGTTTTGAGAATAATTAAACTTATTTCCTGTCCAAGGTGGTAAGTGCATGTAGGAGTGCACTCACCACCCCCGAAATTGTATGTGTTGGGGGATGCAAACACCAGTAAATGCTGTGAGAACTTTTTACAAGCTGGGAAAGCTTATCACACTGAAGGCTGGAAGTTTTGTTTTGGTGACCCTCTAACTTGGAATAGGAGGAGAAGGAATATCTCTGTTTTCAACCCTCCAAAAACCTCAGATGGCCACTTTGGTGCATGCTTACCTTCTCAGCTAGTGGCAGCCACTGGCAAACTTAAACAAGTCATAAGTTCTGCTTCAGTGCTGGTGTTCTGGGGGTGGCTCCCAAGCATTACTTAATATCCTAAGCAGTCATCATTTGGCCTACCACAGCAATATCTAACTGAAGAGTTCACACTATTCTAGGGTGAATAAAGGAGGTAAAAATCTCAAAGACATTCCAGAAATAGAAATAACGAATTCTTGCATTTGATTGTGAGCCCTTTCTAGCCCCCAGTTTCCTAACCCTTGTGAAGGGAAGGACAGACAGTAAAGGGGAAACACGTGTAAACCAGGTGCTTGTGCCCGTGCTGAACTGTGGAACTGTGAGGTAGATCTGTAACAAGGACAAGGAAGTTGTGGGCCATACCCGGGAGAATGGAGGTTCATTTGAAATGGAAGTGGACAGGCCAGGGAGAAGCAGCAGTGGTAGCTGGGCTGAGAGAGCACCTACCTCTCTCATTACTAGTCTCGTGGGGAGCACCTCTAGGGAGGTGCCGCAGAATTCAGCAAAGAGGAGAAGGGGGATAGAGCTCACAGGCCTGGCTCAGCTGTTGAAAGAAGACCCTCCTACAAAAGGAAAGGGTAAAAGCGAGGGTGAAGGCGAGATCTGCTAATGCCTGGAAGGAGTTAAAAGCAGGTAGCACAGAAATGGCATAGTTGGTTTAGGAGGGAATCAGGCAGGGGTTAATGTGGCAAGGCACAAGGTTAGACCTAGCCCTTACAGACTGGCTGTCATAATACCACCCTCTTTGAAGTTGGTCTAGCAGAGCCTGGGGACAAGTTTAGACCTGATCACTGACCCAAGTTTATTGCCCTAGGCCAAGAAGGTCGAGGTAAACTGCTAATAAGTGCAATGCTGCTGCTCTCCCAGAAGGTGGGGCACGTGCACGAAAGAACTTTTAGATGTTTACACTCCATTCCAGCAAGCCCTCACACTGCACCTTTGTGGAGCAAAATAACAACCCACAAGTAGGCACCCCAAACGGCAGACACTGAAGCAGCAGGGGATAAGCAATGCAGGCACCAAGGGGCTAAATGAGCTCACTGATCAGTAAGTCAGGAAAAGAAGAATGGAACTGGGCTGAGGTGGCCTGATCCAGGGCGGGTCAGTAAAGCAACAAAGTCTAGTCCTCACACTCAGTGCAAGTAATGTCCCCCTACTACACCATCTATTCCTGACACGGGGTATTTATTTACTCTTTAGAGCCACTAGGCTTCCTAGTCCTGGGCAGCTCTTCCAATCCTTTGGTTAAAAATACTCTAAAAATAACCTCTCTCCCCAATGTCATTTCTACATCTTCCCTAACCTCGACCCAAACCCTCCTCCAAAAAGCCTCGGGTCTGAGTATCCAGAGTGAGACAGGAGCAGTAATAATATTGGCATGAGGTGGGACAGGCAGGCACTAAGCCTAATAAAGGATTATATCATCTGAGAAAGTGATTCTAGTATGTTCTATTTGACTGAAAAGAGAAAAATACCAAGTAGTAAAATATTTTAAGAATGTTAACGAGCACTGTAATGATCAAGGGTGAGATGTGAAGTACAGGGAGAGTACGACCTGGGTTCCATGAAGACAGGATTCGGAAAACACTAGCATAGTTTAAAGAGCCCAGCGCAGGGCTATGAGCCTGCAGACGCCCCTGTAATTCCTCAGCAGCTCCACTGCCACCAGTGGGCCATTCTGAGAGAGAAAAACTGGCCCTTATTCCTTCTCCTTTTCCCACTCAATCATGTTATGAACTGTCAGAAATGAACTAACAATTAGGGGGAAAGTATCATGAGTGTAACCCAAAAGGGTCCAAACAAAATTCCACGATGCCATTAACCACTACAAAAATAACCTCAGGCTCTCACTCCATCGCTTCCCATGCCCAAACCAGAAACATTCATTAATAAAATCCATTAAGCAGATTCACATGAGGAAAACGGACAAAAGGTAACTTCATAATTTTAAAACAAAACAATGCAAAATAAGAGCCATTTAAACATTTAAATACAGAGAAAGTAGAACCAAGAATTCTGAGAGGCAGAGAAGGGGCAGCACTAATGTCAACAGCTTCTGTATATGAAAGGCCCTCCTTTCACTAAACCTCCAAGCAAAGCAAGGTTCCCCCAAACTACTATTAATTAACTGAACTAGACTCTTCTCTTTTTCTTCAAGGCCCCTGAAGAGACCTATGGTGTACTTTTCTGACTAAGGACTAGAGACTCGGAAACAAGAGCTACCTGCCCAGGCAAACCCTCCCAGAAGGTTACTGGACTTGGGGCTGTTTTACATCAGATAAAGCCTTCCTGAGGTTGGAAGTTACCCATGAGAAAACTGTAGCAATTTCATCTTTTATATTTTCCATCTTACCTATTATCCCCTACCTGCTGTCTGCTGCCTCTACTTCCTCACCCTCAGGATGCACAAGAGGACTTGGGGGTGGGGAGCATCAGGACTCTCAACTCTGGGATGGGCAAAGGGAAGGGCGAGCTGGGCCCAAGCTCTGTGTACAACTGACATCACAGCTTCTTCCCGCCCTGGAGCATCTCCTTCCTCTCCCTACAGCCAGCCTACTGAACACCTGTTTCCCCATTCTCCATCATCGGGCTTTCCATCTGTCTGGGGGAAACATACCTGACCTGGAAGTGAAGGAGAGCAGCACTCTCCTTTCAGTGTAGAAGGGAGTGACTGGGAAGAGAAGGTGCAGGACCGATGGGCAAAGGCTTCCTCCAATCTGTCTCCAGGTACGTAGCCAGGTTTTGCAGAAGGAGATGGGGTTGAAGAGCAAAACAGAGCCTTGTTGTGAAGGGCTCCTGACCTTGGGAATACTGAGATGGGATTTATTGCTCTTTTCTCTCCTAGCTCCCTGCTGTCCTTCCACAAGGAAAATTATTTTTGACATCCTGGTTCCCTGGGAAAGGGGCCCAAATGCTCTGGACAGTTACAAAGAACTTTGTCCTTTCCCACCCCAGCATAGCACACACACACACAGAGACCAGCCCCCACCTCGATCCCTCTCAATGTGTGTGTGCACGTGGCCTGAACCCTTCAAGGGCAGCCCTTGCTGTATACATAGAGGTGCCAAAGGTCAAAGCCTGGGAAAAATTCAAGAACCTCAGTTCTCTCTCAACTAGTTGCCTGGGGCTCAAAAGGCACTGTGTGTCCAGGGCTGGGAATTTACCAAGTCCTCTGGTACACAGGCAGGCTTGACACTGTCTTCATCAAGGTTTCCTAACCGTGGCACTACTGACATTTTGAGTCAGAGTTCTTTGGTCTGGGGAGCCAGGTCTCTCCTGTGCACTACAGGGTATTCAGCAGCATCGCTCGTCTTCAGCCACTAGATGGCAGCAGCACACAGCCTCACGCCCAGACATGACCACGAAAAAATGTCTCCAGAGACTGCCTAATGGCCTCTCTGAGAATCACTGGTCTAAAGGTGAAGCCGCTGATGGTCCACGGTGGGGAAGGAACCTAAGTGGATTCAGCAAGGTCACAAATGCAAAGGCTCTGAGCATGGCAATGACATGCAACAGGGAAGAGAGGGGCCCTGAGACCCAGGGCAGAAAAGATCCTCCGGGAAGCAAAAAGCAGGTATTCCTGAAAAGCTGTAGCTGGAGAAGACATTTTCTCAGAAGGTGTGGTTCTGGCCTCGGCAGTGAGAAGAATTAGTTAGAAGTCAGTAGGTCTGTTCCTCTGGAACT EMBV3_38103 GACCAATTCCGGAAGATATCCTTCTTCGAGCTTTTGAGGTATTAGATCCAGCTAAACGAG Gene GeneID:615715|EFCAB2:NM_001101247:110_cdna Constitutive 1 NULL GeneID:615715 16 GENE EFCAB2 NULL EF-hand calcium binding domain 2 EMBV3_12370 TCTTGGGAGATCAGAACAAACAATTTGCGAATGGACTGTCGGAAGAAACATAAAGATGCC Gene GeneID:767872|NOL8:XM_002689836:126_cdna Constitutive 0 NULL GeneID:767872 8 GENE NOL8 NULL nucleolar protein 8 EMBV3_26540 AGTCAGAAGGGGAGTAGAGCTGTGGAAGAAAAGCAGGCAGCAGAGACAAGTGCAAAATAC Gene BVT0102_321978 + 0 NULL GK000003.2:69212783-69221073 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16061 TGTCACACCCAAGCTGGTGGAGGAACACCTCAAAAGCGCTCAGTATAAGAAACCACCCAT Gene GeneID:100125883|MYST1:NM_001105483:191_cdna Constitutive 0 NULL GeneID:100125883 25 GENE MYST1 MGC149016 MYST histone acetyltransferase 1 EMBV3_16043 CTGAGCATTAATCTAAATTTCAGTATTATTTAAACATTTTCAATTTGTGTGCATGTTTAC Gene GeneID:506062|PMP2:NM_001075239:16_cdna Constitutive 1 NULL GeneID:506062 14 GENE PMP2 MGC142428 peripheral myelin protein 2 EMBV3_08717 TATGAGACCTGACCCCACACACACCTGTTCCCTTGGTTGCGTTGAAGTCCCCTGGACAGT Gene BVT0102_318016 + 0 NULL GK000025.2:26689461-26692035 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146689 TCONS_00146685 TCONS_00146687 TCONS_00146688 TCONS_00146684 1 XLOC_089171 Coding TCONS_00146689 XLOC_089171 Coding Coding KIF22 25:26690626-26709145 j TSS109603 3549 1 TCONS_00146689_2 662 19 0.80937466249055 0.00474753799589576 0.00358251115269006 0.00148094422052022 0.00141444748373985 0.000388369637794326 0.000460383527356099 0.000185719389583109 0.0021939793825424 0.00171815358324515 0.000437861425709045 2.23247155943478e-09 0.0003034573899908 4.28588941020669e-12 0.00014874913402582 6.02100900226435e-05 0.00427290293610777 1.19482442925347e-19 0.00369351909881642 0.00074056398227998 0.00264107504813047 0.00116989220097959 0.000225934027253149 3.89181049204182e-09 0.00120857603710734 0.00312357934569729 0.00133411154552225 0.00251781200812042 0.00176895093590626 0.00111089630119036 2.07705369326879e-11 NM_001101868.2 KIF22 Bos taurus kinesin family member 22 (KIF22), mRNA. 0.0 3755 99.90 0.588052972668357 NM_007317.2 KIF22 Homo sapiens kinesin family member 22 (KIF22), transcript variant 0.0 2569 88.10 0.565511411665258 TCONS_00146689_2 sp|A6QPL4|KIF22_BOVIN KIF22_BOVIN Kinesin-like protein KIF22; 0.0 1336 100.00 0.998489425981873 2 coding 0 0 0 0 0.0673731424427315 0.558871696666051 0.0221884760203915 0.711942153898335 GGAGTGGGATGGACGCGGGGCTCCCGGCGCGGAGGCGACGCGAGATGGCGGCGGCGATCTCGGGAGCCGGTCGCTGTCGGCTAAGCAAGGTGGGCGCTGGCCGGCGCCCACCTCCAGCTCGAGTGAGGGTAGCTGTGAGACTGCGGCCCTTTGTGGATGGGACAGCTGGAGAAAACGACACCCCCTGTGTGCGGGGCCTGGACAGCTGTTCTCTGGAGATTGCCAACTGGAGGAACCACCAGGAGACTCTCAAATACCAGTTTGATGCTTTCTACGGGGAGAGGAGCTCTCAGCAGGACATCTATGCAGGATCGGTGCAGCCCATCCTGAGGCACTTGCTGGAAGGGCAGAATGCCAGTGTGCTCGCCTATGGGCCCACAGGGGCAGGGAAGACGCATACGATGCTGGGCAGCCCAGAACAGCCTGGGGTGATTCCTCGAGCTCTCATGGACCTCCTGCAGCTCACGAGGGAGGAGGGTGCTGAGGGCCGGCCGTGGGCCCTCTCTGTCACTATGTCCTACTTAGAGATCTACCAGGAAAAGGTATTAGACCTCTTGGAACCTTCATCGGGAGACCTGGTGATCCGAGAAGACTGCCGAGGAAATATCCTGATTCCGGGCCTCACGCAGAAGCCCATCACTAGCTTTGCTGATTTTGAGCGGCACTTCCTGCCAGCCAGTCGAAATCGGACTGTGGGAGCCACCCGGCTCAACCAGCGCTCTTCCCGCAGTCATGCTGTGCTCCTGGTTAAGGTGGATCAGCGAGAACGCCTGGCCCCATTTCGCCAGCGGGAAGGGAAACTCTACTTGATTGACTTGGCTGGCTCAGAGGACAACCGGCGCACAGGCAACAAGGGCCTGAGGCTGAAGGAGAGTGGAGCCATCAACACCTCCCTGTTTGTATTAGGCAAGGTGGTGGATGCCTTGAACCAGGGCCTCCCTCGGGTGCCCTACCGGGACAGCAAGCTCACTCGCTTGTTGCAGGACTCTCTGGGTGGCTCAGCTCACAGCATCCTCATTGCCAACATTGCCCCTGAGAGACGCTTCTATCTGGACACAGTCTCTGCACTCAACTTTGCAGCCAGGTCCAAGGAGGTGATCAACCGGCCTTTTACCAATGAGAGCCTGCAGCTTCCTGTCTTGGCACCCGTTAAATTGTCTCAGAAAGAACTGCTAGGCCCATCAGAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGAAACTGAGAGTCCCGAACTCCCAATAGCTCCAGCCTCTGCCTCCCAGAAACTCAGCCCTCTACAGAAGCTAAGCAGCATGGATCCGGCAATGCTTGAGCGCCTTCTAAGCTTGGACCGTCTGCTGGGCTCCCAGGGGAGCCAGGGGACCCCTCTGCTGAGCACCCCAAAGCGAGAGCGGATGGTGCTCATGAAGACGGTGGAAGAGAAGGATTTGGAAATTGAGAGGCTTAAGATGAAGCAAAAAGAACTAGAAGCCAAAGTGCTGGCCCAGGAGGCTGCTGATCCCAAGGAGAAAGAGAACTACTCTACCACAATGCTCCGACCCCTTGCTCGCCGTACAGTCACAGTGGCTAAGCCCCTCAAAAAGGCAGTGGTAATGCCTCTACAACTGATTCAGGAGCAGGCAGCATCCCCAAATGCGAAGATCCATATCCTGAAGAAGAAAGGCCGGAAGAGAAAGCTGGAGTCCCTGGATGCATCACAGCCAGAGAAGGCTGAGGACGGCTGGGAGCTGCAGATCAGCCCAGAGCTACTGGCCCATGGTCGCCAAAAAATATTAGATCTGCTGAACGAAGGCTCAGCCCGTGATCTTCGCAGCCTGCAGCGCATTGGCCAAAAGAAGGCTCAGCTCATCGTGGGCTGGAGGGAGCTCCATGGCCCCTTCAGCCAGGTTGAGGACCTGGAACGCGTGGAGGGTATATCAGGGAAACAGATGGAGTCGTTCCTGAAGGCAAACATCCTGGGTCTTGCCGCGGGCCAAGGCTGTGGCCCCTCCTGACTGCCGGCTCCCCTCCTTTGCATCCCCCCGTTGTTTTTTTTTTTTAAGTCCTTGTGTAACTGCTTGTCTTGTAAATACAGTTTTCACTCCATTGCTTCAGCCTGATTCTTGGGACTACGGGGGCGGGGCCGGGGTATAATTGCCCTTGGGATGGGCCACAAGCTCAGCCGTCCTCGGACGACGACCGTTAACCGGAGCTTCTCCCGGCCGGATCACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACGGCCCTTCAAATGTGAGAAATGTGAGGCAGCTTTTGCTACGAAGGATCGTCTGCGGGCCCACACAGTACGACACGAGGAGAAGGTGCCATGTCATGTGTGTGGCAAGATGTTGAGCTCGGCTTATATTTCGGACCACATGAAGGTGCACAGCCAGGGCCCTCACCATGTCTGTGAGCTCTGCAACAAAGGTACAGGTGAGGTCTGTCCAATGGCAGGTGAGGTCTGTCCAATGGCGGCGGCGGCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGTGGCAGCCCCACCCACAGGCGTGGGCTCCCTCTCTGGGGCCGAGGGGGTGCCTGTGAGCTCTCAGCCACTTCCCTCCCAGCCCTGGTGAGCTCCAAGTTGGTGGGGGGGAGAGGGGAGAATGGAGGAAAGTCCCTCGGTACCATCTCCTCTTCCCCTCTCTTTTCCCACCAACTCCTCACTACTTCCCCCACCAACCAAGGAGCCTCCAGAAGGAAAGGAGGAAGAAATGTTTTCTTAGGGGAATTCGCTAGGTTTTAACGATTTGTTTCTCCTGCTCCTCTCTCCTCCCTATGAGACCTGACCCCACACACACCTGTTCCCTTGGTTGTGTTGAAGTCCCCTGGACAGTGGGCAGGGGGGAGCAGAGGACAGGAGTGGCCACTGCCCTCACCCCCTCTCCTCTCTGTGACCCCCTGCCCTGCCCTTCCAGGGATTGTGAGCCTTCTCCCTCGATGGTCCTTGCTCTCCTCCTTCCGGTGCCCCTGCCCCTATTGTCTGCTGCCCCTCCCTGGGGAGTTGGTGCTTTTTTTTTTTTTTTTTCCAGGGGGAGGGAGGAGAGGAAGGAGGGAAATCAAAGATTCTGTCCCAGAGATGGGGAAAGGTGAGATCTGAGAAGGGGCAGAAAGCAAAGGTTGTACCTTCATCAGGTGGGGTTGTTTGGGGTCAGGCCCTGAACATCATCCTGCTTAAGAATCTGTCAGGGGAAAACAAGTCAAGGGGAGCAAAAGAAGGAGCCACTAGGGCCAGAGGCAGGACAAGAGATGGAATCCTAGGGGCCAGGGTAAATGGAGGTATCCAGGGACTAGAGGTGCTTCCTGGGGGTGGGGGGAATGCAGCCACAGTGTCTCCCCCTTCCCTCTTCCACCCCAGCTCCAGCCCTGGCCTTTTCTTTTCATCCCTCTCCCCCACGACAGAAGCTGTGGCCCTGGCCATGTCATCGTGTTCCGGTGTCCCCTGCATGTTCCCCACCCTTCACCCCCTCCTTTTGCGCGGACCCCATTACAATAAATTTTAAATAAAAACCT EMBV3_15843 GGAATGTAGCTGGAATAACATTGCCAAACATTAGGCTTTCCCTTTTGTTCCGTTTGTGTT Gene GeneID:286825|WDR44:NM_174774:5_cdna Constitutive 0 NULL GeneID:286825 X GENE WDR44 NULL WD repeat domain 44 EMBV3_05046 GTCAGATAGGACCCCCTCCTCTTCCTGATAATGACATTGGAAAGCTTCATGCCCGTTCAC Gene GeneID:507311|DYNC2LI1:NM_001038051:65_cdna Constitutive 1 NULL GeneID:507311 11 GENE DYNC2LI1 MGC133720 dynein, cytoplasmic 2, light intermediate chain 1 EMBV3_24105 ACAACTCTACATGCCCACCCACTGCTCCAAGGCCACAGTCATTGTTTCCAGACACCCTTA Gene GeneID:614135|STX18:NM_001099719:19_cdna Constitutive 0 NULL GeneID:614135 6 GENE STX18 NULL syntaxin 18 EMBV3_16606 CGCTTCAACGTCTCAGCCACCAGGAAATCTACCAGTAACAGTAACATAGCAGCCAGTAAC Gene BVV0102_034513 + 0 NULL GK000023.2:30731339-30737492 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134851 TCONS_00134852 TCONS_00134850 TCONS_00134849 TCONS_00134853 1 XLOC_081557 Coding TCONS_00134851 XLOC_081557 Coding Coding HIST1H2BM 23:30735396-30767794 j TSS100441 3460 1 TCONS_00134851_1 126 0.235260115606936 3 0.893292588819952 0.000444303147919093 0.000301726239010693 0.000292558705396292 0.000279256403555266 0.000153607288156356 0.000129900319078296 0.000247574118358417 0.000639098171890464 8.79235431402981e-09 4.97339773554419e-05 0.000790987093460901 7.15986576315694e-06 0.000321166461651551 0.0009962540644013 4.73612081611066e-09 0.00185740879197123 2.11579340049723e-05 0.00130147089190724 1.33960474869936e-20 3.45368771222787e-39 6.52762705856647e-30 0.00165813189258528 0.002932304529299 0.00204693093065989 1.17041298532339e-05 0.000551080834038325 8.45834256518634e-05 0.00056148866767579 0.0026955156943786 0.00268155268269396 NM_001081742.1 HIST1H2BB Bos taurus histone cluster 1, H2bn (HIST1H2BB), mRNA. 0.0 2443 99.63 0.395086705202312 XR_241927.1 HIST1H2BN PREDICTED: Homo sapiens histone cluster 1, H2bn (HIST1H2BN), 4e-164 583 91.71 0.118208092485549 TCONS_00134851_1 sp|Q99877|H2B1N_HUMAN H2B1N_HUMAN Histone H2B type 1-N; 4e-87 254 100.00 0.992063492063492 2 coding 0 0 0 0 1.05504874824998 0.392443053312485 -0.00668329673719267 0.925051087913729 CCGCTTCTCTTTTCTTACTGTTGCTTTTGGGTTGTTTGGCAGTAAACTCCCGGCCATGCCTGAACCCTCGAAGTCCGCTCCGGCCCCGAAGAAGGGCTCCAAGAAGGCAGTGACCAAGGCGCAGAAGAAGGACGGCAAGAAGCGCAAGCGCAGCCGCAAGGAGAGCTACTCCGTGTACGTGTACAAGGTGCTGAAGCAGGTCCACCCGGACACCGGCATCTCGTCCAAGGCCATGGGCATCATGAATTCGTTCGTGAACGATATTTTCGAGCGCATCGCGGGCGAGGCGTCGCGCCTGGCTCACTACAACAAGCGCTCGACCATCACATCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTTCCCGGAGAACTGGCCAAGCACGCCGTGTCTGAGGGCACCAAGGCCGTCACCAAGTACACCAGTTCTAAGTGAGCCGGCCCGCCATGGAGTGATCGAACTACATCCATCACTTCGCGATCCTGCTGAAGCCATCAGTGCAATTAAACTCATCAGAGTACTCAGAACAACGTCCACTATGGATTCTTCACGTCTGTCATCCTGACAGTCCTCCGATACATTTTCATTGGATCCAACATCTTGGTGGAGGAAAATCCCTGAACACTATCCTGACTTCTTAAGGTGGAATGCTTATCTCTTTAGGCTACATGAGACTGTAGCTGTTGCTTCCTTCAAACCTAGTGTTAAATTTTGGCAGTGACCATACTGTGGGACATAGACTTCTAAAAGCTACAAACCATGACTTTGAATAGTTTTTCAGTTGTAATTTGATGGAGTTAAGAAATATAATTGAAGAACATATGCCATTTATCTGTATCATGTGCTGCTGCTCTAATGTTCCAGACTTCAGTCCATCCTATGTAGGAAGGTGAAAGCTTGCAATAGTCCTTTAAGGCCACTCTCATTCCATATCTATTTTCTAGATGCAAAGAGACGGGGAGTATTTTGTCTAAATAGCTAGAGGATCAATGACAGAGTCAGTTTTTAAGCCTCATGGTAGTGGCCATCACTATAAAAATGTTGTTATTTTGTGGTCTTCTTTCAAAACAAATAAATAAATGGAGATGGGCCATTTGTATTTGTTTTAATAGTGAAAAAGTTGCCATTCTTTACTTGGGGGAAAAAAAAAGTTTGTCCTTCTTGTCCCCAAGAACAGAAAAGAAAAAAAAGGGCAGTTTATTATTTTTTTCTTGGTGAACACTGGTCCAGCTCTCTTTAGAGGGTCCTGTAGCCCTACTCCTATCATCATTCAATTAATAACTTTTGCCTTTCCTGTGGGAAACAAGCATGTATAGCAAAGTCTGCCTGTTGATTATAATACTGAAATTAAAAAATCAAAACTGAAACCTGTTTCTAACTTTTCCAAAAGACAGTGTTCGAAAATTACAACTTAAATTCACATAGTGCTTGTACACAGACTGTATTTCATCTGTTGGAAATGTGTGCCAATTTGCTGTTAAATCATGCTACCAAGGAGCAGAGAGAAACCTGCCCACTGAAACTGCTGTGTGAGACATGGAATTATATCTCTTATCTGACCATCATTTCTGCCTTGAAAGTGGTAATGAAATTGACCAGAGGTCCCTCCCTGAAGCAGCAGCCCAGCTGGGAAGACCCTTTATATTCATTTTCCTAGAGGGTCAGCAATTCAGATTTCCCCAAGTGAAAGGCTTAAACTTTCACTCTGGATGAAACCTGAATGCTGTTTATTTGCAATGGATGCTAAACATTAACCTATTCTTTTTCTTAGTTTCTTTTGTCCTCCTCATTCCAAAGGACCAAAACTAGGCCTAGTCCAGGGAAGGGAATCATGAGGTCCTGATTTCTATGGCCTGTTCTACTTAAAGGAAGGCAGCTTTAATGGGGAAAAATCCTCCCGCCTATCAAAATGTAACCATATTTAGGGATAGAGTCTTTAAATAGGTAATTAAATTAAAATGAGGTCATTGGAGAGTGATTGGGTCCTGATCCAGTATGACCAGTGTTCTCTTAAAAAAGGAAATTTGGACACAGACAGGCATAGAGGGAACATATGTGAAGACAGAGGGGGAAACATGGCCATCTATGCTAAGGAGAGGGCCTAGAACCCATCCTTCCCTCATGGCCCTCAGAAGGAAGTAACCCTTCTGGCACTTTGATCTCAGACTTCTAGATTACAGAAGAATGAGAAAACAATTTTCCATTTTTTCAACCACCCAGACACCCAGACAGGAATACCTTGTTAATGGCAGTGGTGAAGGCAAAAGTGAAGTTGCTCAGTCGTGTCCAATTCTTTGGACCCCTTGGACTGTAGCCTACCAGGCTCCTCCGTCCAAGGGATTTTCCAGGCAAGCATATGGGAGTGGGTTGCAATTTCCTTCTCCAGGAGATCTTCCCTACCCAGGGACTGAACCCGTGTCTTCCTCAATGTAGGCAGACGCTTCAACGTCTCAGCCACCAGGAAATCTACCAGTAACAGTAACATAGCAGCCAGTAACATAAATATAATGCTACAATCCCAGTCCTCTGTCTCTTTACCTGTAGACCAAAGATACTATTAGCACGTATCTCCTTAGATTGAAAAAATAAAAAAAAAGAAGAAAAATTAAATAATGCACAGTATCTGAAGATAATATACACTTAACACATGGCAGCCAATAATTAACGTGACTTTTTCCCCCTGTATGCCAAAAGCAAGATGTAAATGCCATATAATTTACTCCTTGAAGGCAGATCTTTGAGTAAAGAGCCATAACATAAACGCTGACATTCAGTCATCCTGTAAATGACAAAATATTAGAGCAAGTTAAATAAAAAACATCCAGATGTATAAGGAGATAAAGTAAATGAAATATATGACAATAAAATGCTAAAGATGGAAAAACTGAATAGTTTACCAAAGCAGGTCATTTTGATATTCTGAACTAATAAGAGTATACCTGAAAGCAACCTAAACAGGTAGAAGTAGCATAGGCCCCAGAAAACCATTTGAGACTGAAGTTATGCCAATACTTGCTAGCTGGATATATTGGATTTTACTTTAGTGAACCCGTGTGTATGATCAGGCCACACAAGATGGCTGTTCTCTTGCTCTCTGTACATTCCTTGCTTGAACAGCCCCTGCTTTCCATCATCCCACTCATAGGACTGACCTTTTGTCTTAATCATAGAAATTAAACTTCTTAAGTGCTTGCCCCCTGTTCCAACAAGTAATTGTTGTATTCTTAGAACAGAATAGCTTTAGCATGCTGGGTTAATAAAGAGAACACTTGATGGTTGTTAACCAAAGGAACTGTTGAAGGAGATCATCTGTTGGTTTCCCTGGTAGTTGATGAGCTCACATGACATCCATTCCCACTGTAATTGTTACACCTCGCCACTCTACCCCCATGAAGACTGCTGCCTTGTCCTGTTTCAGACCTGTAAATACCCTAGCCAATAAACTGTTGATGTCTCTGT EMBV3_35475 GGGCAATGTCATCGGTGAGCCAGAGACGGGATCTCCAGGCGACCATTCGTCCTCATTAGA Gene BVT0102_019210 + 0 NULL GK000025.2:41068749-41099258 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08885 TGCTGTTTGGCCTCGACGTGAAGGAAACGGATCCCAACAGGGGTATTTATGTCCTTGTCA Gene GeneID:529626|MAGEB10:XM_002700277:17_cdna Constitutive 0 NULL GeneID:529626 X GENE MAGEB10 NULL melanoma antigen family B, 10 EMBV3_25664 CGTCGGTCAGTAGCCGAACCAACCTGATAGGAGAGCCCGGCATAGGTGACAAAGTTGGAT Gene GeneID:613711|CCNY:NM_001102268:154_cdna Constitutive 0 NULL GeneID:613711 13 GENE CCNY MGC165952 cyclin Y EMBV3_30919 CCAGTGGGAAGACGCTCTAATTTTCAGAACTCAGAGTCCACATTCCAGGAGCTGCCCAAA Gene BVT0102_262747 + 1 EMBV3_20476 GK000016.2:43819938-43848338 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03959 CCTTGTGTTGGCAGGCAGATTCATAACCACAGGGAAGTCCCAATCTGGGTGATCTTGAGG Gene BVT0102_012629 + 0 NULL GK000008.2:87893186-87946779 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03274 ACGAGGTTCGTGAATGTAGTGCCTGCAGTTGGACACAATCAGCTAACACAAGCCTCTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16586 CCCAGCTCTACAAGGATGCCGGGTGCCAACAGCCAGCGAGGTCGCCGGCGCTGGCCGCCG Variant GeneID:507017|LOC507017:XM_002699580:58_cdna 485^902 1 EMBV3_14984 GeneID:507017 X GENE LOC507017 NULL similar to UPF0472 protein C16orf72 EMBV3_26190 TCCAGGTGGGCTCTGGGAAGGATGAAGCAGGCACCCGGTGGCCACGTTTTTCCACCTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14373 ACCTTCTCCGTCGCCACCCCTTTGTTGAGTGGCTGCGAGCCAAAGTTCGCACGAAAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17099 GCCCCACCTCCCTTCCCATCCCTCTGGATTTGTAACTATTTTGCACTTTTAACACCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30061 CTTACTGGGGGCAGTGCGATCATCAGGTTTTCCATGAAGCGATGTGACCCTGCCAGCAAA Gene GeneID:515670|ASPSCR1:NM_001104980:93_cdna Constitutive 0 NULL GeneID:515670 19 GENE ASPSCR1 MGC159635 alveolar soft part sarcoma chromosome region, candidate 1 EMBV3_18837 TGTGTTGCTGGGCATTTTAGCGTTGATTATCGGACTTTCCGTTGGGCTGAAGTAAGGGCG Gene GeneID:513275|STX3:NM_001101971:8_cdna Constitutive 0 NULL GeneID:513275 15 GENE STX3 MGC166049 syntaxin 3 EMBV3_27906 TCGCCATGAAGCTCCATACCTGTTCCAGAAGTGGTGTCGGGATGATGTGCTCATTGAGTG Variant GeneID:538579|RIMKLB:NM_001076113:49_cdna 807^922 1 EMBV3_41929 GeneID:538579 5 GENE RIMKLB FAM80B MGC142528 ribosomal modification protein rimK-like family member B EMBV3_06735 TATTTAGATTTTGGTTTTCTGAGCTGTCTTTTTAACTTCTAGCAAATCTTTTTAGTCATC Gene GeneID:510209|SLC4A7:NM_001098926:77_cdna Constitutive 2 NULL GeneID:510209 22 GENE SLC4A7 MGC157111 solute carrier family 4, sodium bicarbonate cotransporter, member 7 EMBV3_42841 TGGATACTCAGAAGAATATTCAAGTTCCCTGGGAGGCATGGTACTGGTTGAGGCCTGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37632 AAGCGGCAGCTCAAGTGTGACGTTTCCTTTCTTCCTGGCGCCTCGCTGCGGACTTAAATA Gene BVV0102_241458 + 0 NULL GK000001.2:1222855-1223604 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00338 ACAGCCAGCGTAGCTGCCTTTGAGGGCCAGGCCTATTTGGCACCCCGCTGTTGACCACCC Variant GeneID:281809|HSD17B10:NM_174334:5_cdna 506^614 2 EMBV3_05191 GeneID:281809 X GENE HSD17B10 HADH2 MGC134122 hydroxysteroid (17-beta) dehydrogenase 10 EMBV3_29563 CCTGGAACCCTCAGAGAATCAGGATGAAGACTAGGAGGGAGCCCAGTTTGCAGATTTGGT Gene BVV0102_022683 + 0 NULL GK000007.2:51344139-51349484 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213403 TCONS_00213402 1 XLOC_130446 Coding TCONS_00213403 XLOC_130446 Coding Coding LOC100848789 7:51344516-51348748 = TSS159870 1276 1 TCONS_00213403_3 147 6 0.699834554478847 0.133818003927703 0.112421160388072 0.125103610224114 0.101044436648654 0.0983306865246477 0.0403605193967944 0.0623917093877533 0.0941331682572906 0.105925072333338 0.00936725474234831 0.00301398451928903 0.00305162324056483 0.0108295073981933 0.03492048312578 0.0271167528944844 0.000682880936715472 0 0.0011011634989397 0.169028650815156 0.193255733925889 0.0859153327966506 0 0.0015673513960605 9.19279223788595e-05 0.166351322978364 0.123061078742872 0.117353451982442 0.00132485062089696 0.000924504775200119 0.00316728041659258 NM_001281909.1 SLBP2 Bos taurus oocyte-specific histone RNA stem-loop-binding protein 2-like (SLBP2), mRNA. 0.0 1687 100.00 0.731974921630094 XR_168768.1 2010110K18Rik PREDICTED: Mus musculus RIKEN cDNA 2010110K18 gene (2010110K18Rik), 8e-86 322 76.58 0.316614420062696 TCONS_00213403_3 sp|P97440|SLBP_MOUSE SLBP_MOUSE Histone RNA hairpin-binding protein; 2e-28 108 53.76 0.625850340136054 1 coding 1 1 1 1 -1.7558888962063 0.00228830640371109 -1.45961895241959 0.000923324402196652 AGCAGCAGCAGCAGCGACCACCACTCCCTAGGATAATACCTGGAGGAATTCATTTATGTGGGAGGGTGTTTTAAATGGATTGTGTTTTTTTCCCCTTGCTTCTTTCTCGTGCCGTTACGTGGACCTTTCCTTATTTTTGCTAGCCTTCCCCTATAGGTGGAACATTAGCAGCCAGTGTGGCAGATGTTGCGGCAAGACAGAAAGAAGGTGTGTGAAGAGTCTTTATCCTCCAAGATGGAGATGATGAGTGTGGGAGTCAGTACAGAGCCCTGCCATGCCAGGTGGGAGCTAGAGACAGATGCAACTGTTCTACAGCGGCGGCAAAAGCAGATAGATTATGGCAAGCGCACACCTGGTTACCAGTGCTTTCTGCAGCAGGTCCCCAAGGCACAGCGACAGCCAGGACTTCACCCTCAAACACCAAACAAGAACAGGAGGTACAGCCGTCGCTCCTGGGATGCCCAGATCAGGAAGTGGAGAAGAGCCCTACATTCCTGGGACCCTCCCAGCCAGCCTCTGCAGGCTGAGGGGTGCGGAATGGACAATCCCTTAGGGCCAATGGATTCCACCCCTTTGGATGACTGGCTCCAGGCCCTGGAACCCTCAGAGAATCAGGATGAAGACTAGGAGGGAGCCCAGTTTGCAGATTTGGTCACTCCTGCCTTCCCTGTCTTTCTGAGGAAGATTCCCACCATTGCCTCTACCTTTGAGCTGGTCACAATTACTTATCTGTCCCAGACTTCAGTGGTGCATAAAATATTTAGGGAAACCGTGTCTTTCAGGGGACTTCTTGCTGAATGTAATAGTGAAGATTACTTGCAGTACTTCTACTTTTCAACTTATTAAAAATCTAAAACTCTGTCCCACAAAGAGATCATAACACGAAGGCATTGTTTAAAACCTCTCCTTTTCCCATGTTTTACCCTCTGTCTAAACCTTCTTTGATAGCTGATACTCAAATTTACTTAAGAGCCAGAAACCACCTAGCCGTTCCACAACCTCTTCACCTACCAACTGCTACATTCAGTCTCTTGAAAAAGGACTTAAACTTTGGCTGAGTAGAAGGTAGTGGTAGCGATGGAGATTTAATAAAAGGTGGTTTCTTCTTCCTGAAGAGGAAATATAGCGCTATCAATATCTTTTCCCCCAGCGACCTGTTTCCTCCATCCCAGAAAGGTTTAAAGAAAGTGGTCCAGCTGTAACCACCGTACTTTCCCTTCTCCCCCCTCCCCCACGCAAGCAACTGAACCGCCTATGATGTCATAATCACAATCCC EMBV3_21670 CTTATAAAGAGGCTGTCCCGTCCATATCCTGCCCCAAAAGACAAACTGTTCCTCTGAGGC Gene GeneID:504991|ANKRD22:NM_001081579:19_cdna Constitutive 0 NULL GeneID:504991 26 GENE ANKRD22 MGC155161 ankyrin repeat domain 22 EMBV3_29105 CCAGTCACTAACACTTGCTGATGGATGTTGTCAAACCATCCCTTCTTTTCTCCTAAATGT Gene GeneID:534360|LOC534360:XM_002684745:202_cdna UTR3_Alt 2 NULL GeneID:534360 1 GENE LOC534360 NULL similar to poliovirus receptor-related 3 EMBV3_34124 GAGACAACCTCAAGTACAGCAGCAAGTTCGTCAAGGAGTTCCTGGGCCGGCGGTCTAGCA Gene GeneID:511308|WNT9A:XM_002688510:37_cdna Constitutive 0 NULL GeneID:511308 7 GENE WNT9A NULL wingless-type MMTV integration site family, member 9A EMBV3_00425 GCAAAGTCCTACGGCAGGAAGAAGCATAGCAAATACAAGAACTGAAAGAAGGTCAGCTGG Gene BVV0102_083512 + 0 NULL GK000011.2:7045389-7122685 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22322 ACACTTCCTCCCAGTGAAAACATAGAAGAGGAAGAGGAACGGGAATTATTCGGCCTTCAG Gene GeneID:616488|LRRC39:NM_001076425:197_cdna Constitutive 1 NULL GeneID:616488 3 GENE LRRC39 MGC128228 leucine rich repeat containing 39 EMBV3_39609 GTGCTGCAGGAAAAAGCGCTCAAGTTTATGACATACAACAGCTGTGCCAGACTCTGCTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37583 CCTTTGACAGGGCAGGCTTTGTTCTGAACTGTTCCGCTTCTGACTGTTACACATCGACTG Gene GeneID:100125763|LOC100125763:NM_001105045:198_cdna Constitutive 0 NULL GeneID:100125763 10 GENE LOC100125763 MGC155269 neuronal protein 3.1 EMBV3_21448 ATTCCAGACACTGCATCACGCTAAACGGAGGCCCCTAGGCACTAATCACACAGGCAATTG Gene BVV0102_134063 - 0 NULL GK000005.2:27082524-27091607 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194370 TCONS_00194374 TCONS_00194373 TCONS_00194372 TCONS_00194371 1 XLOC_117731 Coding TCONS_00194370 XLOC_117731 Coding Coding EIF4B 5:27090274-27103277 j TSS145046 2738 1 TCONS_00194370_3 361 10 0.790186125211506 0.00402271784698281 0.00128588848495575 0.0021341712239782 0.00119344817398852 0.00203890989990486 0.000553864696820457 0.00160029285472529 0.00173210334999981 0.00466061786243142 0.00318989324116811 0.0019068812394322 0.00138160789444268 0.000300022204992387 0.00131749071751828 0.00049465107457338 0.0366751572813936 0.00561026538509231 0.00771741873393664 0.0013717946477735 0.000225661362362454 0.000526148866213864 0.0146283488834438 0.00588471398451429 0.0141557141744619 0.00261583025066309 0.00179334656092507 0.000544726765606533 0.00501941625290714 0.00289665642531792 0.00460374142531668 XM_005206207.1 EIF4B PREDICTED: Bos taurus eukaryotic translation initiation factor 4B (EIF4B), transcript variant X1, mRNA. 0.0 4901 99.35 0.99963476990504 XM_005268709.1 EIF4B PREDICTED: Homo sapiens eukaryotic translation initiation factor 4B (EIF4B), transcript variant X1, mRNA. 0.0 2800 82.75 0.992695398100804 TCONS_00194370_3 sp|P23588|IF4B_HUMAN IF4B_HUMAN Eukaryotic translation initiation factor 4B; 0.0 549 90.76 0.997229916897507 0 coding 0 0 0 0 -2.28578388898462 0.0200911794866196 -0.0632496104158605 0.252838578308731 ACAGGGATGATCGTTCTTTTGGCCGAGATAGAAATCGTGATTCTGACAAAACAGATACAGACTGGAGGGCCCGTCCTGCTGCAGACAGCTTTGATGACTACCCGCCCAGAAGGGGTGATGATAGCTTTGGAGACAAGTATCGAGATCGTTACGATTCAGACAGATATCGTGATGGGTATCGGGACAGTTACCGTGATGGCCCACGCCGGGACATGGATCGATACGGGGGCCGAGATCGCTATGATGACCGAGGTGGCTACGATTCCAGGATAGGCAGTGGCAGAAGAGCATTCGGTAGCGGGTACCGGAGGGATGATGACTACAGAGGAGGCGGGGACCGCTATGAAGACAGATACGACAGACGAGATGACCGGTCCTGGAGTTCCAGAGATGATTACTCTCGGGATGATTACAGGCGGGATGATAGAGGTCCCCCTCAAAGACCCAAACTGAACCTAAAGCCTCGGAGTACTCCTAAGGAAGATGATTCCTCCGCTAGCACCTCCCAGTCCAGTCGTGCAGCCTCTATCTTTGGAGGGGCAAAGCCTGTTGACACAGCTGCTAGAGAACGAGAAGTAGAAGAGCGGCTACAGAAGGAACAGGAGAAACTGCAGCGTCAGCTGGATGAGCCAAAACTAGAACGACGGCCTCGGGAGAGACACCCAAGCTGGCGAAGTGAAGAAACTCAGGAACGGGAACGATCGAGGACAGGAAGTGAGTCATCACAGACTGGGACCTCAGCCACATCTGGCAGAAGTAAGTCAGACCAGGATGCAAGAAGAAGAGAGAGTGAGAAGTCTTTAGAAAATGAAACCCCCAATAAAGAGGAAGACTGTCAGTCTCCAACTTCTAAGCCTCCCAAACCTGAACAGCCTCTAAAGGTAATGCCAGCCCCTCCACCAAAGGAGAATGCTTGGGTGAAGCGAAGTTCTAACCCTCCTGCTCGATCTCAGAGCTCAGACACAGAGCAGCAGTCCCCTACAAGTGGTGGAGGGAAAGTAGTTCCAGCTCAACTATCTGAGGAAGGATCAGCAAGGAAAGATGAAAATAAAGTAGATGGGGTGAGTGCCCCAAAAGGCCAAAGTGGGAGCTCCAGCCGTGGTCCGGGAGATGGGGGGAACAAAGACCACTGGAAGGAGGCAGACAGGAAAGATGGCAAAAAGGATCACGACTCCAGATCTGCACCTGAGCCAAAGAAAGCTGAAGAAAATCCAGCCTCGAAGTTCAGTTCTGCAAGCAAGTACGCTGCTCTCGCCATTGACGGTGAAGATGAAAATGAGGGAGATTACACCGAATAGACCTCTGCATTCTGTGCTTTCTCCTAATCTCTCTCCACCCTGGAACATTCGAGAGCAAATCAAACCTCTATCCAGACAAGACAAAATAAAACTCACCATCTCCTGGAGACCTTTCTTAACTTTTTTTTAAAAAAACACAAAATGAAATGAAATTCTTTTGCATGCTGCTGCAGCCTTTAAAGTATTGAACTAACAGGAGAATCATCAGTGTAGCCAGAGAAAGAGACGTACAGCTTTTAATGGAAAAGTTGTGGTGTGTTTTTATGACACATGCAATTGCCTGTGTGATTAGTGCCTAGGGGCCTCCGTTTAGCGTGATGCAGTGTCTGGAATCTAGTTGGGCAGTAGACAGGTATAAGGAAGAGTGAGGTTCCTACCTTTAATTCCTATTATCCTGTTGTGGCATACATGAATTCTCAAATATGACCTGAATAAATTCTCCATCCTCGGCAAGGTAGGTTTAGTCTCTGATGTTTTAGTCTCCAGGAGGCTGCCAGCCCCTCCTCTCATTTAGTTCTGAGTTACTGGGGCCAGCCTACGGGGAGTTCCTTCATTTGTACCCCCCAGGGGGGTAGGTGGAAGTGAGTCTACAGGCCACTGAAGAATAGGACTGTTTGGTGACCAAAATAAATGGGGAAATCGTGGTGTGAAAAGAAGCTTCGGGGTTTCGTGAATTATTTTGCACCAGTAATAGAGAAAATGGTATATGACCTCCAGTAAACACATGAATGGTTTACTTCCTGGAGCAGGAAGCACTTAGGGTTCATGGGAATTCCCAGATCTTTTATGTGTCCTGGTTTCACCCTTTCTTAAACACTGTCCCTTCTGAAAGTTCAGATAAATCCACATTCTGTTGAAATCTTGAAGTTTTAAAAATTCAGACTCTTGTCATCATCTTCGGTTCCTCGTGCTAGTCTTTCCTGACCTTCCCAGGGACGACTTGGACTTCGGTCTCACTCTTGAGCTAGGCATCCTCTAGAGCCCCGCGGGAGCTGTCCAGTGAGGAATCACTACTGCTTTTCTTAAGCAGTTCTTGGCTCCTTCATTGAGTCTCACTCCTTCCCTCAGCCATTCCTGCTCCTCCTGCTTTGACCCCTTTTGCACCTCAGAAAACTTTAGAATTACCAGTCTTAGGTGGTGTGTGTGGTTAAATTGGAAACCTTTCTTACAACCTTGATTGGTGTTGGGTGTACTTTTTCAAAAAGTTTCCATCTCTGCACTGAAATCCCACACAAATGTTTGGGTTTATAATGTGGCCTAGACCAAGTGTTGCGGGGGGGGGGGGGGGGGTGTTCTTTTTATTTTTTAGCATTCCTTGCGAGAACGAATGATAATGGAGAACAATTTAACAAGGTTCTTGCTTCTCTTGCAACACAGTAGCTCTACTTGCCTGCTTTATGTGCACCTTGGTACTGTCAGCTCAATAGATGGTGTCCTTAT EMBV3_20669 TCAGCCATGCTTCATACATAACCTCAGGGCAACCCAAAGTGGGCAGGAGGAGTTGACCAT Gene BVT0102_045287 + 0 NULL GK000025.2:1686194-1702117 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145898 TCONS_00144187 TCONS_00145899 TCONS_00145900 TCONS_00145896 TCONS_00144185 TCONS_00144184 TCONS_00144186 TCONS_00145897 2 XLOC_088966 XLOC_088484 Coding TCONS_00144187 XLOC_088484 NonCoding Coding RAB26 25:1684266-1692805 j TSS108317 7704 1 TCONS_00144187_2 183 0.35877466251298 5 0.0982665729679082 2.53361100772916e-13 1.93900296882037e-13 9.04349257217138e-06 4.22565728763155e-13 2.1924024766469e-05 4.50434340717531e-06 2.68528823819166e-05 7.23928730018197e-14 5.13060750097812e-06 4.49589172039573e-05 0.000381306012568808 0.000241670489991715 3.63854356283242e-08 0.000260452541996343 0.00011630886852139 0.000825275898573992 1.35331549364109e-98 0.00032480883543814 4.8287375290881e-05 1.78608348710627e-06 7.27940319537307e-14 1.29564375394835e-13 0.000907374128411655 0.000580523975898526 3.63884946420032e-13 7.15075149847236e-09 1.83917032808291e-05 0.000296362783796 0.000232067109966467 6.47667095723989e-05 XM_005224449.1 RAB26 PREDICTED: Bos taurus RAB26, member RAS oncogene family (RAB26), 0.0 5918 99.40 0.428738317757009 0 noncoding 0 0 0 0 0.0341301878515579 0.817233973291854 0.0458862381818628 0.366943486032929 CCATGCCCAGCACTGCTGCTGCTCTATGACGTCACCAACAAGGCCTCCTTCGACAGCATCCAGGTGGACTCTGCCCAGGAGCGTGCGGTGAAGCGGGAGGATGCGGAGAAGCTGGCCAAGGACTACGGGCTGCCGTTCATGGAGACCAGCGCCAAGACGGGCCTCAATGTGGACTTGGCCTTCACAGCCATAGCCAAGGAGCTGAAACAGCGCCACACCAAGGCCCCCAGCGAGCCTCGCTTCCAGCTGCACGACTACATCAAGAGGGAGGGCCGGGGGGCTTCCTGCTGCAGACCCTGAGCCTGTGGGGCCTGGCCACCAGGCGTCCTCCTGGAAGACTAGACATTCTACAGCAGTCAGTCCCAAGTTGAGCCTCACCCACCCCTCATCTGGGCAGTGATCCAGAGCCGAGGTCCCAACAAATGGGCTGCACAAAGCCAGAGCGTCTGCAGTCCTTCACCTGCTGCTGCCCGAGGGCCTTGCCCCAAGGCAACCATCTTCTGTACAGGAGGGACACCGAAGGGCAGACTCCCAGGCGCCTGGCCCTCTGGCCACAGGGCTCTGCCACCTCCATCCCCCCATGGGTACCCCCAACTTTCAGGCTGGGCTGCAGCACCCACACCATATGTATAGTGCCTAACTGCCTAGAAAGCCATTGTCTTCAGCTGCACTTGCTGCCCAGGAAGGAAGGGGCAGGACCCTGCCCACACCTGGGGCAGAGGGCTTCACCACCAATCCCATCCTGCACTGCACCCCAAGGACAACTGCCTGCTGCCAGCCCCTCAATGGGAGGCCCCGGTTCCACATCAACAGGGTCTTTCAGATTCCCATGGAGGATGCCAAGGCTATGGCTTTGTAACGCAGTGTTCAGCCCATGGGAAGTCACGGAAATGTCAGGGAAACCAGGACCACCAGCCTTGCCTGTGGACCAGGGTACCACTTCAGCAGGCCGACACACAGCCTGGGCTCAGTGAGGTCAAGTCACAGGGGTGGGCAGAGCATTCCACCTTGTGCTAAAGAAAAAACTCCAAGTCAGTCTTTTGATCAAAAGCTTTTATTTCTGGTCCTAGTGAATAAAATTTGTTTTCTGGAGTGCCTGCTTCGTCCATTGAAAGACAGCCACAAGCTCTGGGAATTAAAGAGTTCACGAACTACCCCAAGGCAAAGACAACCCAAAAACCTAGAGAAGGTGGTCCTGGTAGGTGGAAAATCACTGGCATGAGCTTCCATTTTCATGTTGCTCCAAGACTGCCCAGGGATGAGCTGTCATCCCAGGGAGTCCTCTGGGGTGCTAACAGGTGTGATCACGCACATGCTGGACCCCAAGAAATCTACCCAGAGGTTGAGAGGTAAAGGTCTTCTACAGCTTCTTCAGCCTAGCGCTAGGCTCACGGCCCCTACCTAACCAGGGCCATGGAACTCTATCCCTGCCTTGCCCAGGGTGACTTCTGCTGGAGCCCCTGCCTCACCATCACCTTAACATGGAATTGTTGCAAACTGGGAGAAACAAACTCAACAGATTAAAAAGGCAGGGACCAAATGCTAGTAAAAGGATTATGGCAACTAGAGGCCCAAATGGGGGTTAAAAACCAGACAATACTCAATAACATCTCTTTAAAGTGCAGTCTAGACAGTCAGCATTTGGGTTACCCCATCAGAAAGGATGAGGCCACTTGGCGTGGTCGTGTATTTTCTTTTACTACCCCAGAGTCATGATGTAACACACCTCCTTTGTTCAGCTAGGAGGAAGAACAAGGCCAGCCTATTATCAGTCACTTTATCAGCCCAGGAACTTAAGAGACGATGAGGGTGTGCAGTGAGTTCCAGGTGGATTCACTCATGGCAGACAGGGTGGCCCCACAACAGAGACCTCCAACCCCTGCTGAAACGAGGCCAACTGCCCTTCTCCCCCAAGGTGGGTGGTTATAGATGGTGAGACTAGGTTTATTTGGTTACTCAGTGTACACTGTCTCATAAACAGCATGGTCTATACAAGCAAAGGCCACAGCTAATCCTGGGAAAGTGGGGTTGTAGTCTGTTAAAAAGGGCAGTTGGTTTATATCCAGACTACAAAGAAATAGATGTCTGGGAGGGGTACAGTCCTGGGGCGCTGCTGTGGAATCAAGCCACTTTAGCAGTCCGCCTGGGCAGGGGTTCTGGTACAGTTTGACAAGATTCCACCACTGAATATGGTTGTATAAGCCTTTTCAAAGGCTTTGGCGGAGGCAAAAACTGTACTAGCTGCTTGGTGCCAAGCCTACCCAGGAGATACAGATCCCATCGGGCCCGCTGACCTTGGGGGCACCACCATCGGCAATTTGATCTCTGGTTGCTCTGCCTTTCCAAAACCCAGTCTGTACAAGTCCTCAGTTCATGTGCTGCTGAAACCTTGCTGTCATGTGAAATGAGTGCAGTTGTGCTGTGGTTTGAACATTCTTTAGCACTGCTTTTGGGCTTCCCTTGTGGCTCAGCTGGTAAAGAATCCACCTGCAATGCAGGAGACCTGGGTTCGATTCCTGGGTGGGGAAGATCCTCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAACTCCATGGATTGTATAGTCCATGGGGTCACAAAGAGTAGGACACAACTGAGCAACTTTCACAGGGACTGGAATGAAAACGGACCATTCCCAGTCCTGTGGCCACCCGTTTTCCAAATTTCTTGACATTCAGAGCAGCACTTTCACAGCATTCTTTTAGGATTTGAAATAGCAGCTGGAATTCTATCACCTCTACTAGCTTTGTAGTAATGTCTAAGATCCACTTTACTCCAGGATGTCTGGTTCTAGGTGAGTGACAATTCCACCCTGGCTATCCAGTTAATAAGACCTTTCCGGTATAGTTCTGTGTATTCTTGCCACCTCTTCTTAATCTCTTCTGCCTGTTAGGCCCTTACCATTTCTGTCCTTTATCCTTCCCATCCTTGCATGGAATATCCCCTTGATAAACTCCAAATTTCTTGATGAGATCTCAAGTCTTACCCATTCTATTGTTCCCCAGTATTTCTTTGCATTGTTCATTCTCACAGCCCTCTAGTAAATTTCCATTGGTCAGAAAGCAATTTGTGATGGAAGTGCCACTATCCATCCCTATTTGACCCTCACTTCTGGGCCCAGGTCTCCTCAGGGGCTGTCAGAAGTAAAAGGGATGGGGTCAGTGTCATCGGTGCGAGTCAGGACAGCTTCTTCTGCTGGCCCATCTGCCCTGCTGCTCCCTTGCCTAACTTTGGACCTTTCGGTGTCCATGGCAATGAATGGTAGCTACTTGTTTTCAAGCTGCAAGATCTCAGCCCCATACTTTACAGGGGATTGTTACATGCTCTACAGACACATGGCATTTTGAATGTTTCCTTCCCCTGAGCTCCCCTGATAGCTCAGTTGGTAAAGAATCCACCTGCAACACAGGAAACTCCAGTTTGAATCCTGGGTCAGAAGATCCCTTGAAGAAGGGATAGGCTACCCACTCACAGTATTCTTGGGCTTCTTTGTGGCTCAGCTGGTAAAGAATCCGCCTAGGTTCAACACTTGGGTTGGGAAGATCCCCTGGAGAATTCCATGGACAGTCCATGGTCACAGATTTTCTTGTCAAGCTGAGTCAAGGCTAATGTGTTACTGTTACTTGGGGTTTAGGAGGGTTGAAGGTGTGGCAAGTTCTTTAAAATTTTTACTGAAGTATAGCTGACTTACAATGTTTTAATTTCTGGTGTACAGCAAAATGATCCCATCATACATCTCTCTCTAGATCCATCCATGTTGCTGTAAACAGCGTTTCATGTTTTACGGCTGAGTTAACGTTCAAAGAGTTGGGACACGTCAACACAGGACGTGTTGGACATGACTGAGTGGCTGAACCGAATATCCCATGGGCTACACACTTCACATGGTCACTACCTGACCACATGAGTTGACAAGAATGAGCACATAGTATTCCACTGTGAGACGAGGGATTTTGCTCGTAAGTGTGTAGCACGTGAAATAAGCATGCTAGCAAAGGTATGCTCAAAACCCTCCAAGCCAGGCTTCAGCAGTATGGGAAGCAACAACTTCCAAATACACAAGCTTGCTTTCAAAGAGGCAGAACATAACTGCCAACAATCACTGGATCATGGAGAAAGCGAGACTGCCAGGAGAAATAACCTCAAATACACAGATACTACCCTGCCATTAGGAACTAAAAAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATGCAGAAAACAAGGATTATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGCAAACAGTGGAAACAGTGTCAGACTTTATTTGGGGGGCTCCAAAGTCACTAGATGGTGACTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCGTATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGCCCGTCTAGTCAAGGCTATGCTTTTTCCTGTGGTCATGTATGGATGTGAAAGTTGGACTGTGAAGGCAGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGGTGAAGACTCTTGCTAGTCCCTTGGTCTGCAAGGAGATCCAACCAGTCCATTCTGAAGATCAGCCCTAGGATTTCTTTGGAGGGAATGATGCTGAAGCTGAAACTCCAGTACTTTGGCCACCTCATGCGAAGAGTTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACAGACTCAACGGACTTGAGTTTGAGTGAACTCCAGGAGTTGGTGGACAGGGAGGCCTGGCATGCTGCGATTCATGGGGTCACAAAGAGTCGGACACGACTGAGCGACTGAACTGAACCGTAATGGCAGAAAATGAAAAGGAACTAAAGAGCCACTTGGGGGTGAGAGTGCAAAGGCTGGCTTAGAGGAAGGAAATGGCAATGGCAACCCACTCCAGTTGTCTTGCCAGGGAAATCTCATGGACAGAGGAGCCCAGTGAGCTGCAGTTAATGGGGTCCCTAAAAGTTGGACAGGACGTAGTGACTGAACGATATTCCATAGCATGTATGTACCACATCTTGGATAAGAATGTACCACATCTGTCAATGGACATTTAGGTTGCTTCCATTTCTTGTTACAGAAACCATGGCAAGGGAGAGAGACCAGTGACACTGGGAGATGCAGAACAGCAGTTTATTTAGCACCTGTCTGGACTCCAGAGTTGCCTCCAGAGGCTGAGTGCACAGGCTTTGTTCTGGCTATCTTTTCTATGGCATGGGATTCTGGGTCCTAGTGACTTTCCCGCCTAAGCAGTTTGGCTGACCCAATAAGTAGGCCAGTTCACAGAAGCAGAGGTGGTGAGCAATAAGCAGGCCAGTTTACAGAGGCAGAAGTGGTTAGCCTAACAATAAACTTAAGCAACTGTTTTTTTTTTTTTTCTCTTCACTATCCACACAGGAGTGCATGTTATCTTTTGGAATAATTGTTTTGTCTGGGTATGTGTCCATGAGTTGGACTGCTGGATCATATGCTGGAGTTGGAGGAACTCCCATACTGTTTTTCATAGTAGCCGCACTAATTTACATTCTCAACAATGATAAGGTTAGGGCTTCCCTGGTGGCTCAGCTGGTAAAGAATCCATCTGCAATGTGCGGGGGATCTGGGCTGGATTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAAGTCCATGAACTGTATAGTCCATGGGGCCACAAGGTCACATGACTGAGTGACTTTCACTTTCCAAAGGTTAAGCTTGTTAGCCTCCTCCAGTAATCAAATTGTCAGCAGCTACTGCCAGGCCAACCTGGAGCCACTTAATCTAGTTGCTTGGAAGCCTCCCAGCTTCTGTATTAGGACTCTACTCTCCAGAGTAGTCCCTTCCTTTCCAGCCAGATACAAAATGGCTTTTTAAAGAGAGGAGCTTTCGTGAGGGCAAATTTTGTAAGTACAAAAAAACATCTTTAGGGGCACTCAAGCCTAATATAGCTCTTCTCTCTTGGGACAGCTGTGTATTTCCAGGGGTTACAATATATTCCATGTATTGAACTTGTTCCTATGAAATTTGTGCCTTTTTCTGGAAGAACCAGTAACCCCGGGCTTGAAGAAAATTAAGAACTTCAATGTCGTTCTCATCTGAGCCTCCATATCAACATGTTATTTACAGACTGTAGAACAGTCCCTTCTAGCAAATCTTTATTTCCTTTCTTAGGGTTTGGGCAAACAAGTGTTGATGTCCCAACACCCCTACGGTGGGTACTTCTGTCCACCAAGTACATTGTTGCATCTGGTCCAAGTTGGGGCTAGTCCACTCAAAGGCAATCTGATATTGTGAGGGATCAACTGGGATTTAAGGTCAGAGTGAGCCACACAGCATCTCCAGGGACTTTTATAAGGATTGGCCACAAGGGGGTGTACAGGGACTACTGCATTTTCCCGTTGAGGTCTCACACCATCTTGTATCCCTCATTTGGCTAACCGACAGAATGGGACTCTTGGATTCAGACAGAGCACCAAGAGCCTATGTTTTAAGAGTGCATCTGTTTAGGGCTGTAACCTTTTCCCTCTAATCTTATGGCTATTGTCTGTTAGGATAATCAGCTTTTGGCTTAAGCTGAGTTTCTGCTGGTTGGCCATTTATGGCCTTCCAGGGACTCCTCTCAGAGAAGGCAATGGCACCCCACTCCAGTACCCTTGCCTGGAAAATCCCATGGACGGAGGAGCCCTGGTGGGCTGCGGTCCATGGGGTCGCTAGGAGTCAGACACGACTGAGCGACTTCACTTTCACTTTTCGCTTTCAGGCATTGGAGAAGGAAATGGCAACCCACTCCATTGTTCTTGCCTGGAGAGTCCCAAGGGACGGCGGAGCCAGGTGGGCTGCTGTCTCTGGGGTCGCACAGAGTTGGACACGACTGAAGTGACTTAGCAGAGGGACTCCTTTGTCTCAAACTGCAGGGTTCACAGCTTGTAGACTCTGGCTGGGTACAGGCCCTTGCTCTTCTTGTTGATCAGCCTTAGCCAGGGTCAAGGTTAGACACTGCTTAAGGCCACCTAACCGCCATGTGGCCCTGAGGGAGCCCAGGGCTCTCCTTGATAGTGGGGTAGGACACTCAACTCAAAAGGCATGTGAGAGGCTCAGTGAAGTAAGGGGCAAGGACTTCCATCAGCTAGTCACCAGGAAGAAGGCCCAGCATGAGAAATCTGGACAAAGTGGCTCCCATATTAAAAAAAAAAAATTTCTTACCTGCCATCAGGGGTTCCTCGATGGATACAGACATCTTGTGGCGGGGGAGCAACCAGAATCCCTGGGCTTCCAGCATGGCCATCCCAGGAGAAGGGCCCCCCTCCTTAGCGACCAAGGGCAGTCCCATCCCCACTGACTGGCCTGTGTGTAGACTGGGCATGGCCCGGGAGCTCCTGGTACTCACTGGCCAATGGCTGGTTGGCTTACACTTAAACCCCCCTTGTTGGTCTCACCTCCAGACTGATGGTCAACTCCTCCTGCCCACTTTGGGTTGCCCTGAGGTTATGTATGAAGCATGGCTGAGAGCAAAGGCTATCTATTTAGTTTGAGCCTTGGTCTGGCTTTTTCATGGTGAGTCCTTTCC EMBV3_23067 GGATGTGAAGGGTGGTGTGGAGGAGACAGGAACTTATACTGCAAGGAAGACAGGAAGGGA Gene BVT0102_190729 + 0 NULL GK000019.2:43663059-43669375 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16818 CCCAAGGCACCGAATTCTAGGACACGAAAGCTATCACCTCCACCCTCAGCCTCCTGAACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20166 GCACCCAGCCTTGATTGATGGGTTCTCCTCACAAAACTCTCAGGAGGAATAGACAAATGC Gene BVV0102_150196 + 0 NULL GK000016.2:59666185-59749575 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33590 CCTACAAGGGATGCACCTTTGCATTTCACATTTCTACTCAGTCATGCAGGATGGAGACCT Gene GeneID:515010|C22H3ORF23:NM_001102016:107_cdna Constitutive 2 NULL GeneID:515010 22 GENE C22H3ORF23 MGC160071 chromosome 3 open reading frame 23 ortholog EMBV3_15615 CTCTGCAGGAGTGACTGGTATCCAAGGTAATGCTTCTTGGTGGGTCAGACTTGATTGTGG Gene GeneID:615868|FN3KRP:NM_001076399:129_cdna Constitutive 0 NULL GeneID:615868 19 GENE FN3KRP MGC142758 fructosamine 3 kinase related protein EMBV3_11615 AGTTCATGGCCGACCTCATCAAGCAGGACTTCTACTACTTCCCGTCCGTGTCGAAGCTGA Gene GeneID:526018|LOC526018:XM_002687961:65_cdna Constitutive 0 NULL GeneID:526018 5 GENE LOC526018 NULL similar to metallophosphoesterase domain containing 1 EMBV3_10743 CTTCCAGGTCTGATGTTCCCAAACAAGGATCTAAAATGCTGGCAAAGGTATCTTCAGCTC Gene GeneID:539740|LOC539740:XM_002685252:53_cdna Constitutive 0 NULL GeneID:539740 2 GENE LOC539740 NULL similar to FLJ44048 protein EMBV3_17199 CACATTTGATTGGGGGTAAAAGATTTGTGAAGAATGTTGCTTTGGTGAATCGAAATGCTG Gene BVT0101_017553 + 0 NULL GK000007.2:89423693-89653271 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00222891 1 XLOC_136198 NonCoding TCONS_00222891 XLOC_136198 NonCoding NonCoding - 7:89432550-89434240 - TSS166889 1690 1 TCONS_00222891_3 91 0.583431952662722 1 0 0.00094595863084923 0.000202158133461744 0.000429845696207932 0.000456974017449705 7.88780865381265e-05 2.11660341539525e-05 0.000503804500133906 0.00043047888756276 6.53620635577716e-05 0 0 0 1.69779903683907e-06 0 8.99951668874707e-05 1.95351833265194e-06 0 1.48467055364412e-05 0.000494630587801905 0.000421981423410933 8.0833044441978e-05 0 0 0 0.000647752146797643 0.00100679409944232 0.000493463203046561 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 670 77.73 0.497633136094675 0 noncoding TTTTCTAATCACTTTAAAATTTCTACCTGAATTATTTCAGTATATCCTAAGAATAAGAGTGGTATGATTATGAAGCTACTTTGAAGGAATTCTATAATGATAAAAAGTAATTATAAATGTTCAGCATTTCGATTCACCAAAGCAACATTCTTTACAAATCTTTTACCCCCAATCAAATGTGATAATTTCACTATACAATAGATTTTTAGATTTAATAAACACTTTTTTGTAATATATGTGCCCAAGTAAAAGTTCTATAGCAGTTTCATATGTAAAGCATTATATCAGATTTGAAAGAAGTATTTGAGTGCTAAATCTTTTCAGGGAACCAATACATATTTTTCTTCTAATTGATGCACCATTTTTGGCTTTTTAACTTATTTCTACTAGTATTCTCACGTTACAGCAAGCAGGATCTGAAGGAAAAAAAGCAATCAACTGACTTGATACATCACAGTTTATCCACATGGTGGAGCCATGTGGCTAGATCCTGGCGACACAAGTTTTTTTCCGCTTCTCCGTTTTGAGATGTCATGCTAAATCCAAAGAACCACACTTCTTGTTCCTGTACAGAATTTTCTCGGGTACTATTAATTTAGTTCCTTTTTATCTCTTACTTAGCACACGACAGTCTTCTTATATTCCACTCTTAGGTAGCAAGTGGTTTTCCAACTTTGGCTGCACATTATAATCACCTGGGCAGTTGTTAAAAATTTCATCTTTGGGGTGCTACCTGAGGCTAATTACACAGGAATCTTTGCAGTGTGAGGCTTGAGGACTGGCAAATTTCAAGGCTCTGCAAGTGATTCAATCTTGAAAGCAAGACTGTAACTCGATGCTCCATTGTTGTTCAGTCTCATACCTGTGTGACTCTGTGACCTCATGGATTGTAGCACACTGGGCTCCTTTGTTCTCCACTGTCTCCTCGAGTGTGCTCAGATTCATGTCCACTGCATTGGTGATGCTATATAACCATCTCATCCTCTGCTGCCTCTTGTCCTTTTGCCTTCAGTCTCTCCCAGCATCAGGGTCTTTTCCAATGAGTTGGCTCCTTGCATCAGGTAGCCAAAGTATTGGAGCTTCAGCTTCAGTCTTTCCAGTGAATATTTAGGGTTGATTTCCTTTAGGATTGACTGATTTGATCTTCTTGCAGTCCAAGGGCCTCTCAAGAGTCTTCTCCAACACCAAAATTCAAAATCATCAATTCTTCAGCACTCAGCCCTCTTAATGGTCCAACTCGTACATCCATTCATGACTACTGGAAAAACCATAGCTTTGATTATACAGACCTTCATCAGTGAAGTGATGTCTCTGGTTTTTAAAACATTTGTCTAGATTTGTCATAGATTTCCTTCCATGCAGCAGGAGTCTTTTAATTTCATGGCTGCTGTCACCATCTGTAATGATTTTGGAGGCCAAGAAAATAAAATCTGTCACTGCTTCTACTTCTTCACCTTTTTTTTGCCATGAAGTGATGGGACTGGATGCCATGATCTTAGTCTTTTGAATATCGAGTTTTAAGCCAGCTTTATCCCTCTCCTCTTTCACCCTCATAAAGAGGCTCTTCAGTTCCTCTTCAATTTCTGCCATTAGAGTGGTATCATCAGCATATTGTTGATTACTGATATTTCTCCCAGCAATCTTGATTCCAGCTTGTGATTCATCCAGCCTGGCATTTTGTTTGATGTAC TCONS_00217892 . 5' 8799 TCONS_00217892 . 5' 8799 EMBV3_40553 TCCTTCAGAGACCAGGCGACAGTCTCTCCTCTGGAGCTGGAAACCAGCACCCACCTCACA Gene GeneID:100294802|LOC100294802:XM_002694725:34_cdna Constitutive 0 NULL GeneID:100294802 18 GENE LOC100294802 NULL hypothetical protein LOC100294802 EMBV3_11222 TCCCTTCCTATTTCCCCCCTGAATCTACCACCTGGGAAAATGTAATTGAGAGAATGTGGC Gene GeneID:537713|SUCLG2:NM_001034639:56_cdna Constitutive 1 NULL GeneID:537713 22 GENE SUCLG2 MGC127366 succinate-CoA ligase, GDP-forming, beta subunit EMBV3_21142 ACAGTCAGCTGTTGGGTTGAGAGTATCTGTGTGGAGATGTGTGTTGTGGGTTTCTTTTTT Gene GeneID:516303|ERRFI1:NM_001077930:70_cdna Constitutive 0 NULL GeneID:516303 16 GENE ERRFI1 MGC142664 ERBB receptor feedback inhibitor 1 EMBV3_09140 AGCAACATGGGCCTTTGTCTTCTGTGATATTCGCCTTCCCGCTGTAGGTCAGAGCTGTTG Gene GeneID:616294|PARVB:NM_001102299:210_cdna Constitutive 0 NULL GeneID:616294 5 GENE PARVB MGC143245 parvin, beta EMBV3_01401 ATCAGAGAATTTAGCCTCTTCATTTCACAGGTCCTTTTGGAATAAATCATGGGATTGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24473 ACAAGGACCTGGAGTCCTGCCCCAAGTCTCAGGTCTTCCTGTACAACCTGACCACCTGCC Gene GeneID:100298498|LOC100298498:XM_002683955:2_cdna Constitutive 0 NULL GeneID:100298498 Un GENE LOC100298498 NULL similar to zonadhesin EMBV3_27782 GCTCCTGAGCCAGACATCCTCAATACTAACACCCTCCAGGGACTTCTCTAGTTGTCCAGT Gene BVT0102_152907 + 0 NULL GK000026.2:11467710-11536181 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08247 GACGCGTTGGGCAGTCTGGGTCCTTCCGCCTCTATTGCAAGTCCTGGGCTGATTGATATT Gene GeneID:514615|COLQ:NM_001035297:11_cdna Constitutive 0 NULL GeneID:514615 1 GENE COLQ NULL collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase EMBV3_01338 GCCAAGGAACAGCTGAAGATCCGCAAGAGCAACCAGATACCTACAGAGGTCAAGAGCAAA Gene GeneID:281813|FUNDC2:NM_174338:58_cdna Constitutive 2 NULL GeneID:281813 X GENE FUNDC2 HCBP6 MGC134489 FUN14 domain containing 2 EMBV3_10062 GTGAGAAGAACTCAGCCATTTGGTTCTGCCTTTGGAGTTGGGAAAAGGAAGCGTGAGCCC Gene BVT0102_083287 + 0 NULL GK000020.2:40040806-40349622 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115081 TCONS_00115082 1 XLOC_069428 NonCoding TCONS_00115081 XLOC_069428 NonCoding NonCoding ADAMTS12 20:40297317-40328673 x TSS85674 2776 1 TCONS_00115081_1 158 0.629682997118156 2 0.911529261680753 0.00221043591080943 0.00137899516371472 0.00135601497853193 0.000864330648901018 0.000994193569119908 0.000409763494251608 0.000710057167355338 0.00109942133594737 0.00154930449042404 2.31435222753187e-05 4.45303365196676e-05 0 0.00010232654213224 0.000515029274043276 0.000164321672857813 0 0 4.519255758063e-05 0.000749745547503155 0.00206644100813956 0.000770961523533356 0 9.25336263949812e-05 0 0.00166223534160155 0.00187050131258113 0.00134482334959686 4.49810051718998e-05 0 2.16579771673721e-06 XM_005224063.1 AQP4 PREDICTED: Bos taurus aquaporin 4 (AQP4), transcript variant X1, 7e-59 233 85.93 0.0713256484149856 XM_005248226.1 LOC100506688 PREDICTED: Homo sapiens uncharacterized LOC100506688 (LOC100506688), transcript variant X1, mRNA. 2e-46 192 73.55 0.119236311239193 0 noncoding AGGGAGAGGGATGCAATGTGAGAAGAACTCAGCCATTTGGTGCTGCCTTTGGAGTTGGGAAAAGGAAGCGTGAGCCCACGCGTGCTGGCAGCCTTTGGATGCCGGGAGAGACAAGGACATCAGTTCTCTGCTAGAGCTTCCAGGAAAAGAACAGCTTAGCCAACACCTTGGTTTTAGCCGAGTGAGACCTGAAGAACTGTAAGGCCAACATCTGCTCTGAGACACCTTGGACCCTTCATCCAGCAGCCCCAGGATATGGCCCTACCTACCAGTGGGTCAATACCAGCTCTAGGACCCCCGAACCTGGCTCTACCTATCTGTAGGCTGACATCAGCTCCAAGTCACCCTGGGTCACACATCAGCAGGCCAACAGCAGCTTTGGGACACCATGGACCTCATAGCCAGTCATGTCAAGAACCAGCTCTGCCTACAGGTAGGGTTGTAGTCAGCCATCTCATGTCCTGGCCCCACCAAGGCAGAGCCTGGCAGAAACCTACAGGAAGCCAGCCACACCTACAAGACCACCCACAGTGGTCAGCCCATCACAACAGAAGGACCCATGCAGCCCAGGTGGGGACACCTTTAGAGCATAAAGCTTTTGTGATGAGAGCAGACTATGCTGCTGGAACACACAGGATTTCTCCTACAAAAGGCTGCTTCTCCAGGTCAGAAAACAAAACCTATCAAATACACAGAAATAAAAAGAGCAAATTAGGCAAAACGAGACAATAGAGGAATATATGCCAAATGAAGGAATAAGATAAAATCCCAGAACTAACTGCACTGAAGACAGGCAACCTATCCAAAAACGAGTTCAAGGTAATGATTATAAAGATGCTCAAAGAACTTGAGAGAAGAATCAGTGAATACAGTGAGAGGATTAACAAAGAAAGACTCAAATAGCTGAAGAATAGAATAGCTGAGATAAAAAATATACTAAAAGGAATTAACAGTGGATGAGATGATAGGAACAGATCAGCGAGCTGGAAGACAGCAGTGGAAATACTGAAGTTGAACAGAAAAGCAAAAAAAGAAAAAAAATGAGGACAGTTTAGAGACCTCTGTGATACAATATTAAGTGCACTAACATTCACACTATAGGGACCCCAGAAGGAAAATTAGGGAAATGGGCCGAGAACATATTTGATGATGTAATAACTAAAAACTGCCCTAACCTGGAAAAGGAAAGAGACATCCGGGTCCAGGAAGCACATAGTCCAAAACAGGATCAACTCAAAGATGATCACATTGAGACACAATGTAATTAAAATGGCAAAAATTAAAGGCAGAAAATTAAAACCAGCAAGGGAAAAGCAACAAGTACAAGAGCACTCCCATAAGGCTGTCAGCTGACTCTTCAGCAGAAACTCTGCAGGCCAGAAGGGCATGATATATTTAAAGTGATGAAAGAGGAAATTCTTGGTTATAATCAAGAATATTCTACCTGATGGAGAGATCGAAAGTTTTACAAAAGCTAAAAAAATTTAGCACTACTAAACTTATCTGGTGACTCAGAGAGTACAGAATCCACCTGCAATGCGGGAGACCTGGATTCAATCCCTGGGTTGAGAAGATCCTCTAGAGAAGGGCATGGAAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATAGACAGAGGAGCCTGATGGACTACAGTCCATGGGGTTACCCAGAGTAGGACACGACTGAGTGACTAAGCACACAAATTAGCTTTACAAGAAATGCTAAAGGGACTTCTATAAGTGAAAAATGCCACAATTAGAAACATGAAAATTACAAAAGGAAGAATTAAATGGTAAATACAAATATACAATAAAGGCAAATACACCAAAAAATCCATCATGTAGAAAGATTAAAAGGCAAAAACCGCAAGTTCATCTATACCCACAGTAAGTAGTTAAGGAATACACAAAAACACATAAAATATGATGTCAAAAACAATAAACATGAGAGAGAGGAGTAAAAATGCAGGGTTGTTAACACATTATTGACCAGGGGATTTTAGTAGACACTAATGCCTATGGCCAGTGAATTGGTAGGTAAGTGAACACTGAAATGTCTCCAGTCAGTAAACATTCAGGTGAAAAACAGATGTATTAATATGTCTCTGGTCAATAATGTGTTAAATGCATCCTATACATAGGAAATCCTAAAAAGATGCCAACAATAACTACTAGAGCTCATCATTGAATTCAATAAAGTTGCAGGATACAAAGTTAATATACAGAAATCAGATGCATTTCTACACACTAACAATGAACTATCAGAAAGAGAAATAGAAGAAACAATTCTATTTACAATATCAAAAAGAATGAAATACCAAGGAATAAATTAAAGGAGTTAAAAACTGTACTTGGAAAACTATCAGACACTGATGAAAGAAATTGAAGATGACACAAACAACTGGAAAAATATCCTGTGTTGATGAATTGGAAGAATTAATTCTGTTAAAATGACTATACTACCCAAGGAAATCTACAGATTTAATGCACTCCCTATCAAATTACCAAATGCATTTTTTACAGAACTAGAAGAGATTAGATAGAGTGCCTGATGAACTATGGAATGAGGTTTGTGACATTTTACAGGAGACAGGGGTCAAGACCATCCCCATGGAAAAGAAATGCAAAAAAGCAAAACAGCTGTCTGGGGAGGGCTTACAAATAGCTGTGAAAAGAAGAGAAGCGAAAAGCAAAGGAAAAAAGGAAAGATAGAAGCATCTGAATGCAGAGTTCCAAACAATAGCAAGAAGAGATAAGAAAGCCTTCTTCAGCGA TCONS_00113923 TCONS_00113924 TCONS_00113925 TCONS_00113926 TCONS_00113929 TCONS_00113930 TCONS_00113931 r 5' 3960 TCONS_00113923 TCONS_00113924 TCONS_00113925 TCONS_00113926 TCONS_00113929 TCONS_00113930 TCONS_00113931 r 5' 3960 EMBV3_40147 TCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGAAAGACTGT Gene GeneID:781054|NRXN1:NM_001109805:191_cdna Constitutive 2 NULL GeneID:781054 11 GENE NRXN1 NULL neurexin 1 EMBV3_37030 AACAAGATGCACATATCACAGTCCATTGAGTTAGAATTTGGAGCTGGGGATCTGCAGGGG Variant GeneID:508137|DNAJC11:NM_001045993:73_cdna 533^655 1 EMBV3_38041 GeneID:508137 16 GENE DNAJC11 MGC134157 DnaJ (Hsp40) homolog, subfamily C, member 11 EMBV3_34970 TTTGGAGAAGCTCCACTACACAAGGCAGCAAGAGTTGGAAGCATGGAATGCCTCAGTCTG Gene GeneID:509139|ANKRD37:NM_001075392:25_cdna Constitutive 1 NULL GeneID:509139 27 GENE ANKRD37 MGC142530 ankyrin repeat domain 37 EMBV3_27664 TCTAAGTGTCCACGTGTATTTTTTGGTCTCGGCCCCTGCACGGTTTCAGCTCCCAAGCTG Gene GeneID:512325|SLC25A38:NM_001014905:86_cdna Constitutive 2 NULL GeneID:512325 22 GENE SLC25A38 FLJ20551 solute carrier family 25, member 38 EMBV3_42550 CATCATGTCCGTAGTTCGTTCATCCGTCCATGCCAAATGGATCGTGGGTAAGGTGATTGG Gene GeneID:508143|MRPS17:NM_001024500:272_cdna Constitutive 1 NULL GeneID:508143 25 GENE MRPS17 MGC137051 mitochondrial ribosomal protein S17 EMBV3_38941 GAGGAGGACCATAGAGTGTTCTGGCTGATCACAGGAATTATGTTTATGGGAAGCGGCCTC Gene GeneID:508554|MRS2:NM_001101903:62_cdna UTR3_Alt 2 NULL GeneID:508554 23 GENE MRS2 MGC166254 MRS2 magnesium homeostasis factor homolog (S. cerevisiae) EMBV3_01554 TCCCTTCCGGAGCTTTGAGATCTAAAACTTCTGTTGCTTTTGCCATTCCAAAACCTTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15967 CTCTGGCCAAAAGGACTCAAAAACCGAGACCGCCCCATTTCCTCCTCCCCACATGGTGCT Gene GeneID:618756|DOK4:NM_001083786:465_cdna Constitutive 0 NULL GeneID:618756 18 GENE DOK4 MGC151811 docking protein 4 EMBV3_14866 AGTCATAGAATCATAAAGATTTGGGGGCAGGAAGAACCTAAGAGGGTTTGTAATACAGCC Gene BVT0102_292050 + 0 NULL GK000019.2:22675103-22694705 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41642 AGGCCCTTCAGGAAAAAGAGGAATTCGAAGAATAATTAGGGGTCCAGCTGAAACTGAAGC Gene GeneID:506683|TWF1:NM_001025320:21_cdna Constitutive 0 NULL GeneID:506683 5 GENE TWF1 PTK9 twinfilin, actin-binding protein, homolog 1 (Drosophila) EMBV3_34449 TGTAGGTCCTGGAGGTGTTTGGAGGAGGGGACAGGAAGGAGCCAGTCCCTTTTTTGAGAT Gene BVT0102_125818 - 1 EMBV3_14214 GK000028.2:44251163-44283035 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159799 TCONS_00159800 1 XLOC_097510 NonCoding TCONS_00159800 XLOC_097510 NonCoding NonCoding - 28:44254622-44257730 - TSS119679 3108 5 TCONS_00159800_5 68 0.074967824967825 1 0 4.72725098544245e-05 5.2956264334653e-05 0.000273522173228283 3.58294102227021e-40 0 0 2.25162541447026e-05 1.38893033113862e-69 0.000144950235889131 3.1888575564106e-06 1.41590964922748e-89 0 7.54891890119076e-05 3.02702503116484e-06 3.81099860760364e-313 0 0 0 0.000198643668939322 0.000351205265209381 8.40601968223409e-191 0 0 0 0.000460522096905739 8.59603110982101e-05 0.00018006389421399 0 0 0 NM_174038.3 DMP1 Bos taurus dentin matrix acidic phosphoprotein 1 (DMP1), mRNA. 2e-53 215 77.09 0.0778635778635779 0 noncoding 1 0 1 1 -0.53047810177807 0.0639213989740359 -0.0354706467451088 0.546099099429285 ACCGCGCCAGCAGGATGGTAGACATCCGGCGGGTGAACCACTGTCTTCCCAGATGAGCTCATGGACGCCGCTTGCGTGCTGGCCTCGCGTGGGCCAGTTGATATTAATCGGTGGGACCGGGAGCTCGGGGTGTCCCTCGCAGGATGGGGTGGGGATGGTGGGGAGGGAGGTAAGAAAGCCTTTGGGCTGGAGTCCTGAACTACCAGTAAGAGTTTTACAGAAGGTGGAGTTTAACAGATGACTTGGCGAGCAAGCGGAAGTAGCAAGAGGGAAAGAGCTAGGGCTGAGACCTTGCCTGACTGCTTAGGGGATACAGAGTCGCTTCCTGGATCGCGGGTTTTGGAGACTGTAGAGAAGGGAGGGGAGGCTGCAGTGGCACGTTAGGGCCAGACATCCCTTCCCCCACGTGTGTGGAGGGACACGATCCTAGGACAAAGCTGCACAAGAACCCAGCAGCGAGGACCTGAGACAGCCCCGCAAGATCGCTGGGGCACTGTTTGGGGCGGGCCTCGGGCTACCCCTGGGGGTGACGCCCCGCAGTGCGCTCCAGCGACTACCCGACTTCTGGGCTGAAAAATACCCCTTCCTCATTGCCTCTTCCGGCCCTTACTCTGCACCCACCAAGCGCGCCCAGCCGGTAAACCCCTCTAAGGAGGCTCTGAACCCGGACCTGGCATTGCAACAGACTCTCGGCTAATCAGTCTCACGTCTCTGCTAGAGCCGGCCCCACTCCACGCTCAGGATGCGTTGTAGGTCCTGGAGGTGTTTGGAGGAGGGGACAGGAAGGAGCCAGTCCCTTTTTTGAGATGGGTACCTGGGAGACAGGCCTGCGCCCACTCCTGGTGAGCTTTGTCAAGGAGTATCCCGGGAAATCCAGTCCAGGCCTCTGATGTGGGGAGACTCGGCCAACTCTGTGAGAAAGCCGTGACTCTCTCAAGAGGGGCCTGTCTCCTGTAAAATGGAGGCAATCAGCTTGAAATCCCACACAACAGGTGAGCACTTAGATATGAGGGGCTCTCACCCAAGCAGAGCCAAACAGCCCATCAAGCTTGCCCTCTTAGGGAATCAGGATGAGTACAGATATATGAGGGAGGGCTTCCTGGAAAAGAAGAAAAGACTGGTGGACTGAAGGAGCAAAGGCTTGGGGGCAAGCATGGGTCGGGCAGGTCTGCGGAGATAATTGGAGGGTGGTTCTCCTTGGCCGGGCGTCTAGTGCTCCAGAGCAGAGGTCAGAATGGAGATATCAGACAGGCCCAAGGAAAGCGCCTCTAATGTTCTAGCTGACATTTGCATCCTCAAAGCTTTGTTTAAGTAGGGGACATGGTCATATTTTGTTTTAATAAAAATATGTTGTTCTGGAAGGTGGTGGAGGAAACAAGGCTGAGGCAAGGAGGAAGCAGCCCAATCAAGGAAAGAATAGTAAAAACCTGTGTGAACTGCAGTTGTACCTGTGGGGTCTGGGGAAGAGCCACCTGTGACGGAGTATTATGCAAGAGTGATCAGTTGCGCCAAGGCATTGAGTCCTGAGCAAGAGGAGTCAGGTGTGCATCCCAGGATCCTGGAGGGTGCCCAAGACCCCTCATGTCTCTCTGTGAGATGGTTACTGGCACGAGAAGAAGCCCTCGTGCAGGGCTGGGCCACACTATTCTTTGAGGCCAAGAGAATATTTCCTCATTACCCTTGGAAAACTAACGAGCTTAATGGAGGGAGAGACCCAAGCAGTCCCTGCTTTCATGGCGGTTTCAGAATACATAGCTGGCTGTCAGCAGGTTCACAGAGTCCTCAACCCTGTATATGCAGGAAAGACAAAACAGAAACCAAAGGAAGGGAAGAAAAAGAAATAACACTGAAGTGTTAGGGAGTCAGAAGACAGGCATTCTTAACTGAGTTGATTTTTAGAGTCAAGATTTTTTTTTTCAATTGCAATGTCGATAAATACTCTTTACAGAAATGTTTGAAAGCACAGAAAATTATAAGAAAATATTCATATCCTATCCTTTTACTCCAACTTACCCACTCAGTTGAGTTTATCATGTAGAGTTTTTCTATCTTCCTTGTGTAGTTTTCAAACTTCTAATACAGTCGTGGCTAGATTGTCTTCACAACTTGCAGAGTCACTTCTTAAGAATATAGGCATTTCCCATGATGTAACAGACTCTCCCAGTTCACCTTAAATGTCGCCGTGTTGAACAGGTCACCCCAATCTTGGCCTGGCAGGTTCAGTTTAATCCATGACCCCTAAACTCCAGTGTATCTACAAATTATGAATGCAGGGCCACTTGGTTTACTGGCCTTTTGCATTATAACAAGTTAAGAAACCTAGCTTCCACAACTCTCATTAATCTTTTTTTCCTGGAAAAAGATTTGGGCAACCCTAAGTGACGTGACTTAGAAACTGCAGCAGTATAATTAACTTCCAGTGGAAGCAAGGATGAAGTGTGGGCTGAGGTTAGTTAATAAAATTGGGGTAGTGTCCTTGTATGATATGAACCGTGTGGCTGTAGAGATGATGGCTCTAGGGAATAATCAGTGCCATTATTGATTTAATAAGAAACAACTGAGCTGTTGATACATGGCTGCTGTTGTTCAGTCTTTAAGCCGTGTCTCTGTGACCCGGTGAACTGCAGCATGCCAGGCTTTCCTGGAGTTTGCTCAAACTCATGTCCATTGAGTGATGCTATCTAACCAACTCATCCTCTGCGGTGCTCCTCTTGCTTTGCCTTCAATCTTTCCCAACATCAGGGTCTTTTCAAATGAGCTGGCTCTTTGCATCAGGTGGCCAAAGTATTGGAGCTTCAGCATCAGTTCTTCCAGTGAATAGACACATAGTTGGATACAGACTTTGTCTTATTATTTAAACTCCACTGAAAAAGAAAAAGTTTGCAGCATATTCTCACTGGTTGACTAGTAGAGGGAAGGAGGATTTGTCATTATTCAGAAAGAGGGGCTCTGCTGACCTTTAAGGAAACCTTAGGAACAGGCCTTATGTTTTAAGCTCAGAGACCCGGGAGCGCAAGTGTTCAACATCTTCTAGGAACTGGGCTCCGTTGTTGTCAATGTCCGTGTTCTTCAGGGTGGGGTCTACAAACCAGAAGCATTGGCTTCACC TCONS_00160833 r 5' 0 TCONS_00160833 r 5' 0 EMBV3_01463 TGTGACCTACGGGACCCCCTTGGACATGGATTGTGACTAAGGCCCATTAAGTCCAGGAAT Gene BVT0102_302217 + 0 NULL GK000017.2:67550016-67560184 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077992 TCONS_00076058 TCONS_00077993 2 XLOC_047191 XLOC_046724 Coding TCONS_00077992 XLOC_047191 NonCoding NonCoding CRYBB2 17:67556811-67561914 x TSS58131 1031 1 TCONS_00077992_5 98 0.149369544131911 2 0.798314386515092 0.000686143945113253 0.00116950211055008 4.70254335078848e-09 0.000161040368425797 0.000373444719091773 0.000183863388335838 1.6937999850021e-05 0.000117469997896107 0.000148774385955263 0 1.33094018344021e-05 0 0 4.5357076629486e-06 0 0 0 0 1.97632997068862e-09 0.0007951434492483 8.23852863906198e-09 0 0 0 0.000148580904761047 7.51265868865518e-05 0.000115914335297935 0 0.000258945957448862 5.7931788743347e-06 XM_005218031.1 CRYBB2 PREDICTED: Bos taurus crystallin, beta B2 (CRYBB2), transcript 0.0 1856 100.00 0.997090203685742 0 noncoding 0 0 0 0 0.0869936754884145 0.499003311492073 0.0459395149637387 0.427068205601229 AGAGTCTCAGGCTCAACAGGGGGCAGAGTCTGTGTCATGGGCAAAAGGCAAAAGGGACTTCTTGGTTGACAATGATCCTTTGGTGTCAACAGTTGAGCTCAGATTGTGTTGACTATAGTCCTGGGTTATCATGGCATGGCACTGGGACGATGATCCTGGGATGCTCAGTGACAGTTCACAGGCTGGAGTCAGCCTCCTGGTCCACGTGCTGAGCGCAAGCTCCCCTCTCAACGTTTAAGGGGTCTTTTCATAGTCTGGCAGTGGCAGAGTTTGTAGAGCAGGTGGAAAAGCCAGTGTATTGTATGTTTAATGGCCCATTCCTGGACTTAATGGGCCTTAGTCACAATCCATGTCCAAGGGGGTCCCGTAGGTCACACACGGCTGTTCTAGACCCCGAACAGGGGTTGTGGTGCTCGAAGACTCTGGTTACATTTTGTAACGTCTCCCACCTGTTGTAACGCCTCGTAGCTGGCGTGTAGCCATGGTCCGGGCCCCTGCATCGCTGCTCTGCCCGCTCCTGCGGCCAGGACTGGGGGGCGGGGGGCGTGCGTTGGGGAGTGGGCTTGTCTTACCCGACCGGTAACCCCCAAGTATGTGACAGATAATCCTCCCCTTTCGTCTGTATTCACCCGCCAACCCCGGGCAGTCAGAGGAACCCCGACTGCAGAGCTGCCACCTTTAAACTGGAAAGAGACTCTGAGTTGAACAGGACACACTCAATCTCACGGAAGAGAAAGATGCCTCTCGTGGTGGTCAGCTACTCAGGGCCCCTCGTGCTAGTGAGCGCCACCTCAGGTCACCCCCTTTCCGTCCCCGTCCTCACTTCCCGATGCCTACACACTCATGAGTTTCCTCAGCCTCTTACAACCGTTAGTGAGCCTTGCAGTTGCCCAGCCTTGAACCTGGAGACAGAGAGACGTCAACGGTTATGGGACAGGGGACCTCACACGGCAGGAGGAAAGGGTCCTGAGGCAGCAGCCCCACTTCCTGCGACAAGAGGCCAGCGCAACATGGCGGCGCTCCTCACCACT TCONS_00076058 r 5' 0 TCONS_00076058 r 5' 0 EMBV3_12540 CTCAGCGGCTGGATGCGCCTCAAGAAGCAGCTATTGGAGGAGCCGGAGGAGCCCAAGTTC Gene GeneID:789200|LOC789200:XM_002699448:165_cdna Constitutive 0 NULL GeneID:789200 29 GENE LOC789200 NULL similar to mCG145277 EMBV3_19552 CACTCCCATTTTCAGCCCTACCTTGGGGAGCCATTCCAAGCATCACAATACCAGGGATGA Gene BVT0102_156781 + 0 NULL GK000022.2:48288062-48301797 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34183 GTTTATCAGGCAGTGATCAGTGACTAACAGGTGCTGATCAGGGGACTGTGCACGCACTGA Gene BVT0102_189517 - 0 NULL GK000026.2:1-29409 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232670 TCONS_00223729 TCONS_00223718 TCONS_00009410 TCONS_00232669 TCONS_00199378 TCONS_00062710 TCONS_00201909 TCONS_00187685 TCONS_00112238 TCONS_00032895 TCONS_00219910 TCONS_00187642 TCONS_00223721 TCONS_00223737 TCONS_00112237 TCONS_00054101 TCONS_00223730 TCONS_00187681 TCONS_00232671 TCONS_00232664 TCONS_00087817 TCONS_00223717 TCONS_00223724 TCONS_00070442 TCONS_00232660 TCONS_00223719 TCONS_00201913 TCONS_00199376 TCONS_00232661 TCONS_00223734 TCONS_00187682 TCONS_00232663 TCONS_00046614 TCONS_00087816 TCONS_00232662 TCONS_00223735 TCONS_00232658 TCONS_00152623 TCONS_00201905 TCONS_00223731 TCONS_00187686 TCONS_00032894 43 XLOC_142155 XLOC_137028 XLOC_137017 XLOC_004966 XLOC_142154 XLOC_121031 XLOC_037437 XLOC_123554 XLOC_113730 XLOC_068135 XLOC_019131 XLOC_133227 XLOC_113687 XLOC_137020 XLOC_137036 XLOC_068134 XLOC_031910 XLOC_137029 XLOC_113726 XLOC_142156 XLOC_142149 XLOC_052606 XLOC_137016 XLOC_137023 XLOC_042220 XLOC_142145 XLOC_137018 XLOC_123558 XLOC_121029 XLOC_142146 XLOC_137033 XLOC_113727 XLOC_142148 XLOC_026754 XLOC_052605 XLOC_142147 XLOC_137034 XLOC_142143 XLOC_092388 XLOC_123550 XLOC_137030 XLOC_113731 XLOC_019130 NonCoding TCONS_00232664 XLOC_142149 NonCoding NonCoding - 8:74746496-74747152 - TSS174168 656 1 TCONS_00232664_1 61 0.44359756097561 1 0 0.000311320032498507 5.59826247687258e-05 5.34878562663481e-06 0.000144129423592351 7.80301857724274e-05 0.000243043696440035 6.70475805291592e-05 0.000368708017079606 0.000722546206287172 1.76560533184924e-05 8.66428985725939e-05 1.75202289832832e-06 7.6289864384386e-05 0.000214795796237694 7.73679461751394e-05 0.00108320559617443 0.0110184735755434 0.000168930020107205 0 0.000260803364675754 1.12363970768953e-05 7.82952500771967e-05 4.26760127019884e-05 0.000129824707450904 4.54482417876968e-05 0.000315433513908976 0.00011051183744268 5.1003132665335e-05 5.71765099429259e-05 9.73018432748438e-05 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 6e-46 188 78.95 0.335365853658537 0 noncoding GTGACTGACAGGCAATGATCATGGGACTGTGCACGGACTGATCACGTGGCTCTCATGCACTGATCACGTGACTGCGCATGCACTGATGACGTGGCTGTTCGGGCACTGATCACGTGTTTATCAGGCAGTGATCAGTGACTGACAGGCGCTGATCAGGGGACTGTGCACGCACTGATCATGTGGCTGATCAGGAACTGAACACCTTACCGCGCATGCAGTGATCACGTGGCTGGTCGTTCACTGATCACGTGTTTATCATACGGTAATCCCGTGACTGAGAGGCGCTGATCACGTGACTGTGTCATCAGTGATCACGTGGCTGAGCAGGCACTGATATCGTGACTGAGCATGCACTGATCCTGTCCCGGGAGCCGGGGAGGCATTCCACTCTGGACAAAGGTCATGAGGAAGGAGGCTCGGCATACGCAAATGCGGGATCGAGCCTCAGGAGTCCACCCGGATATTCTCGAGCATCTCCCCCCCCCAAAAAAACCGGAGTCTGCCTACTGTATTGCTTTGTGCTCTCACCTGTGTTTTCACTGGGGGCTGTCCCCCACCACCATCTCGCTCTCTCTGTCAAAGAGTTAACTTACAGCTCCAATTCATAAAGTTCCTTGTCATTCTTCCCTTTAACTTCCAGCTGAGTCTCCATCTGG TCONS_00225866 . 5' 86479 TCONS_00225866 . 5' 86479 EMBV3_39375 TCTTCAGAGGCATCAACCTGTCAGATGGCAAGTGGCACAGAATTGCTCTCAGCGTCCACA Gene GeneID:537387|LOC537387:XM_002691722:128_cdna Constitutive 0 NULL GeneID:537387 11 GENE LOC537387 NULL similar to collagen type 5 alpha 1 EMBV3_28457 GACTGCAAGAGAAACTAAAAGGAGTAGAGGAAGGAACCGTGCTCAGTGTTGGTGGACAGG Gene GeneID:526824|ATM:XM_002692978:51_cdna Constitutive 0 NULL GeneID:526824 15 GENE ATM NULL ataxia telangiectasia mutated EMBV3_12440 CCTGTGCATGTAACCAAACAGACTGGAACAACACAAATACCTTTGCTTTCAGAAACTGAA Gene GeneID:531382|METTL14:NM_001083714:36_cdna Constitutive 2 NULL GeneID:531382 6 GENE METTL14 MGC138979 methyltransferase like 14 EMBV3_31533 ATTGAAGTCGGAAGGGTCAACACCATCATTCCATCCTCCACCTGGGTTGCGGCCAGAGTT Gene BVV0101_085593 + 1 EMBV3_19539 GK000019.2:37932792-37978509 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099990 1 XLOC_060233 NonCoding TCONS_00099990 XLOC_060233 NonCoding NonCoding - 19:37976514-37976997 - TSS74366 483 1 TCONS_00099990_1 82 0.989648033126294 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.94052925186037e-06 0 0.000192997580281625 0 0 0 0 0 0 0.000998640621397356 0 0.000416513444525065 0 0 0 0.000417616809026918 3.01528147983154e-05 0 XM_005220561.1 PHOSPHO1 PREDICTED: Bos taurus phosphatase, orphan 1 (PHOSPHO1), transcript 1e-96 356 100.00 0.405797101449275 0 noncoding 0 0 0 0 -0.0103373446617683 0.921646181713898 0.0126731994329019 0.812929476457551 AAGAGAGGAAGAAGGAAAGATTTATTAATTAGAGCAAGCAAGGAGATCTTTCCCAAAGCAGTGTCTCTCTGATCAGCAAAACTGGAGAAGTTTTAAGCTAAGGGTACATGTGTTCTTGAAGGGGTTTGTCTGGTATATGAATATTCATGAAGGGGCTTGAGCAGAGGAGATTCAGCATAGAGTTGGGGCAAAGGTCAACAGAGTTCAAGCTTTACTTGATTGAAGTCGGAAGGGTCAACACCATCATTCCATCCTCCACCTGGGTTGCGGCCAGAGTTCCTGCAGAACTCAAAGATATGTATCAGATTGCTATGTATCCCTTGAGGAGGAACTTGGACTCTGTTTTATCACTGAACTATTTTTTCTTGACTGCTTTTCCTGTGTTCTTTCCTTAAGCTCGTTAATTACTGAGACCTATTAATGATAATCATTGTGGCCAGGCTAAGATCACAAAATGGCTTAGGAAAAAATAGCCTCTCAAAA TCONS_00093624 TCONS_00093627 TCONS_00093628 TCONS_00093629 TCONS_00093625 TCONS_00093626 . 5' 1513 TCONS_00093624 TCONS_00093627 TCONS_00093628 TCONS_00093629 TCONS_00093625 TCONS_00093626 . 5' 1513 EMBV3_00101 AACAACTTATTCTGCAAGTATACTATCGAACTGCTGACACTCAAGCTCTGATGGGGAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23274 TGTGTCCTGTTCACACACAAATCATTAAAACGGGGCTGGAGACAGCAGGACTCGTCACGC Gene GeneID:517135|C17H22ORF13:NM_001098044:58_cdna Constitutive 0 NULL GeneID:517135 17 GENE C17H22ORF13 MGC155311 chromosome 22 open reading frame 13 ortholog EMBV3_15026 ACAGGTCGTAAGAGTGAGGCTGAAAAGTTCTTCTTGAAGGCTATTGAACTGGACCCCACC Gene GeneID:100337258|LOC100337258:XM_002687180:59_cdna UTR3_Alt 2 NULL GeneID:100337258 5 GENE LOC100337258 NULL transmembrane and tetratricopeptide repeat containing 2-like EMBV3_33227 GCAGTGCTGGGAGCGGAACGATATCAAAGCCATTTGGTGGATCATACGAACCCCTATTCT Gene GeneID:617879|GIPR:XM_002695171:805_cdna Constitutive 0 NULL GeneID:617879 18 GENE GIPR NULL gastric inhibitory polypeptide receptor EMBV3_13412 GCTGGTCCTGTTTTAAACATGCTCTGTGGACTACATTAGTCCCTTGTAGAGCAGCAGGGC Gene GeneID:529207|DHX37:XM_002694471:299_cdna Constitutive 0 NULL GeneID:529207 17 GENE DHX37 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 37 EMBV3_32327 CAGATGTCTTGGGGACCACCCAAAGAAGTGGCGAATGTGTAAATCCCACGAGCTAGACTT Gene BVV0102_124723 + 0 NULL GK000001.2:144297830-144320102 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09541 CCCGATCTCAGATGCTCCCTGCTTCTCCTGGTGTCGTTTCAGCCAGATGTTGCACCCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17569 AAACACATTAAGACGCACAACGGGGGCGGCGGGGGCAAAAAGGGCAGCGACAGTGACACG Gene GeneID:517257|SP9:XM_002685318:169_cdna Constitutive 0 NULL GeneID:517257 2 GENE SP9 NULL Sp9 transcription factor homolog (mouse) EMBV3_20202 CGTGCATACACGCGTACCAATTACATTGGCCTCTGCATCACAGTTACCCATCCCTTCTAC Gene GeneID:282257|IFNAR1:NM_174552:16_cdna Constitutive 2 NULL GeneID:282257 1 GENE IFNAR1 NULL interferon, alpha; receptor EMBV3_23343 CACCAGATGCTGCCTTCAACCACCTTTGTCCACTTTAAAATCAAGGTCTGACTGTCTAGG Gene BVV0102_081227 - 1 EMBV3_24006 GK000017.2:18885246-18892760 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076795 TCONS_00076793 TCONS_00076792 TCONS_00076794 1 XLOC_046916 Coding TCONS_00076793 XLOC_046916 Coding Coding CCRN4L 17:18887207-18907519 j TSS57579 7259 1 TCONS_00076793_3 361 0.149194103871057 3 0.642755157303924 7.68522799347276e-05 7.08719469203089e-05 2.81546711420533e-05 9.20368315608539e-13 2.77876743512961e-06 4.20192211813702e-05 2.21041158602987e-05 0.000103277762419676 2.39288577464777e-16 5.55738163095392e-10 3.33940688527119e-11 3.82607481648753e-05 9.25856931071945e-05 2.33804939678956e-12 8.51288625597948e-07 0.00156864096978235 0.00253899288754915 0.00106034538728061 6.07606210521525e-07 2.56403064303339e-08 2.32633043929888e-119 0.000193597286829146 0.000390833687127398 0.00102734871466114 4.84872839151943e-05 3.90833312790953e-05 1.67348536852797e-05 0.000252485385116711 0.000220173303604492 1.16203158610478e-08 NM_001082454.2 CCRN4L Bos taurus CCR4 carbon catabolite repression 4-like (S. cerevisiae) (CCRN4L), mRNA. 0.0 3027 99.88 0.231712357073977 NM_012118.3 CCRN4L Homo sapiens CCR4 carbon catabolite repression 4-like (S. cerevisiae) (CCRN4L), mRNA. 0.0 1382 86.88 0.157321945171511 TCONS_00076793_3 sp|Q9UK39|NOCT_HUMAN NOCT_HUMAN Nocturnin; 0.0 721 95.83 0.994459833795014 1 coding 1 1 1 1 -0.0633453501112606 0.565917078498431 -0.0359036386797217 0.517858968304785 GTGGCAGTCAGATGTCACTGGAAAGTGTATCCCATGGGAAACGGCACGAGCAGGCTCTACAGTGCTCTCGCCAAGACACTCAACAGCAGCGCGGCGTCCCAGCACCCAGAGTACCTGGTGGCCCCTGACCCAGAGCACCTGGAGCCCATCGACCCCAAAGAGCTCCTGGAGGAATGCAGGGCTGTCCTGCACACCCGGCCCCCACGGTTCCAGAGGGATTTTGTGGCTCTGCCAGCCGATGGCCCCAGTAGCCACCCTCCCATTAGGGTCATGCAGTGGAACATCCTTGCCCAAGCTCTTGGAGAAGGCAAAGACAACTTTGTCCAGTGCCCTATGGAAGCCCTCAAGTGGGAAGAAAGGAAATGTCTGATCCTGGAGGAGATCCTCGCCTACCAGCCGGATATCCTGTGCCTCCAAGAGGTGGACCACTACTTCGACACCTTCCAGCCCCTCCTCAGTAGACTGGGCTATCAGGGCACCTTCTTCCCCAAGCCCTGGTCGCCCTGTCTGGATGTGGAGCACAACAATGGACCCGACGGCTGTGCCTTGTTCTTCCTCCAAAACCGATTCAAGCTGGTCAACAGTGCCAACATCCGGCTGACGGCCATGACGCTGAAAACCAACCAGGTGGCCATTGCCCAGACCCTGGAGTGCAAGGAGTCCAGCCGCCAGTTCTGCATCGCCGTCACCCACCTGAAGGCACGCACCGGCTGGGAACGGTTTCGATCAGCTCAAGGCTGCGACCTCCTCCAAAACCTGCAGACCATCACCCAGGGGGCCAAGATTCCCCTGATTGTTTGTGGAGACTTCAACGCAGAGCCCACAGAGGAGGTCTACAAGCACTTTGCTTCCTCCAGCCTCAATCTGAACAGCGCCTACAAGCTGCTGAGCGCTGACGGGCAGTCGGAACCTCCGTACACGACCTGGAAGATCCGGACCTCAGGCGAGTGCCGGCACACGCTGGATTATATCTGGTACTCCAGGCAGGCACTCAGCGTGCGGTCAGCCCTGGACCTGCTCACCGAGGAGCAGATTGGACCCAACCGGCTACCGTCCTTCAATTACCCTTCAGACCACCTGTCCCTAGTGTGTGACTTCACCTTTAACGAGGAACCTTGATGGATATTTATAAACGCTTGTCTGTGTCTTTTTAATCGCAGGAGTCTTAACCAGGGATGTTTCAGGAAACTGAAATAGAATAAGTTGACTGAGGAAGGGTTCCCAGTTTCTCTCACTTCTTTTGTTTCCAGCATGCCCTTGGGAAGGAACCCCGTTAGCTCACATTAAAACCTTTTCCATTAAAACCTACAGCAAAAAGGTTTTTGCACTCCAGTATTGCTTTGCATTGTTTTCTTTCCCTTAGGATTAATTACATGTTGATCATTTAAGGGCATTATATTGGGCTTGTTTTGAAGCTTTTTCTGTTAGAGTCATTAAAATAGTAGACTTGCTTGAGTCTCCCATAATTAACAAGTATGCAGGAACAGTTTCTCTAGACATTTCAAGTTATTTATTTGTGTTTTTTAATATCAAGTTATGCATGGCAATATTTATTTTTTATATCTTCATGTAAAATTAAGTAAATTATAACATGAACATGCTAAAACCATGCAAAACATAAGTTATAGAGTAATTTATAGTAATTTTCTTAAAAGCTTTAAAGATGTTTTTATTGGAATCTAATAAAATAATAGTGTACAAAGGAACTATTTAGTCTTGAGGGGTTTTTGTTATTTAAGTGGAGATACCAGTTCTCTATGATCTCTTCTTCATAAATCTTTGCTATGCCTCTGTGTTCTCCATTAGTGTGTTTCTTGAAGAGATTCCATGGCTAGTCTTCATTATTTGGTCACTGTTACACATTTCCGGTATTCCCTTGGAGTGCTCTTGGTGTTTATTCGCAATCACTCTGCCATTATTTGTATTGAATGTGCTTTGCACAGTACATATATTTAGGTGTGTGTGTGTGTGTATATATATATATATATATAATTTGGTAGTGGCTAAAGACAGTAGGACCTTCTTTTTAGAGATGGGAAACTTCCTGGTCTGTTCATGACGCTGTGGTTGAGATTTACTAAGATAGCCAGGCAACTGGTTTTAAAAGATCTAAAAACCAGAATATAAAAAGTTAACCTGAAATTCTCTTCGCTCAGAAATAAAGTGGTAAAGATAAAAGGTGAAACTCCTTCCTAATGAAATCCCAGAAAACAGCCCACTGGTAATAATATATTTTAACCCATGAGTTGTAAATATTTAAGATTAATAAATAGTCTTTTAAAGCTAGTGTTTTAATATCTTGTTTTTTTAATGCATAGGGAATCTGAGAATAAATTTGGTCTTTTAATACTGTTAATGTGGTGCTCACACAATCCTAGACAGTCAGACCTTGATTTTAAAGTGGACAAAGGTGGTTGAAGGCAGCATCTGGTGCTGTTTGTGAGGTATCACTTGGTGACAAGGTTGGAGTCCCCAAAAATAGTTCCTCCAGGTATTCTGCATTGGAAATGCTTTTGAAACAAATAAGGGTTTCAGTATATATTGTACACACAAAATATCTGGAAGGAATGGCAAGTAGGAAGAACATATGTACCAGCTGTCATCTGGTTCAGATCTTAGCAGTGACTGAATTTGCACATTGAGAAGCAGAATACTGATCTGGACAGGCATTAAATACTGTTTACCTACCCTAAAGCACACCAGTTTGAAATCATCATACCCATATCATAAGCAAATCTAGATGAGAATAAAAGCTAAAAAAAGTGTTTCAATTGCAAATGTTAATAGGCTATGGGAGAAGGGTGGGAGTTGGTGGGAATGCCTCTGAGCAAAAGGGCTCCTGGAAATATCACAAGTCAGTCACCCTTCAGCATTGCCATGGCGGTAGGCTAAACACATACTTCTGTATGCTTTTGTTGTATTTGTCTTCATTTAAAATGTAGTCATGTGAGCATTTTATGTAAAGTTTTTTTAGTAGTTTATAAATCTTGCTAGGTGGCACTTTTATTTCTCTAGTCTTTCTTTTGTAGACAGCTCTGCCTTGTGGACCATCAGTTACCTGAATGCATAACGGCAAATAACAAATGTCGAAGGTAAATTGTCCAGATTATTGAAGACAGTGAGAATGGATTTTTTTATTCCTCCATGGCTGTATTTCATGAAATCCTACGAGGTGGTAGGGATGACATAGTAAAGTATAATGGTGTGTATAACATTTAAGTCCCTTATTTTTGGCTCTGAACTTTGCATATGACATAAAACTGCTCCTAATTTAAAATGGAGCCTAGGGACTTCCCTGGTGATGGAGTGGGTAAGACTCCCAGTGCAGGGTGCCCAGGTTCGATCCCTGATCAGGGAACTAGATCCCACATGCCACAGCTTAAAAAAGCTCCTGTGTGTCACAAGGAAGGACCTGGCACAGCCAAATATTTAAAAAAATAATTGGGCCTAAAAAGCCCAAAAAATCTGAGCAAGGTCCCAGTGGGACTAAATTCTAGAAAAGAAAATAAAAACACAAGCTGATAATAACTGATTTCAATTGGAAAGGCATCCAAAAACTGCTTGAATAAGGAGCTCTGAACCTTTTTATAATGACATGTATAAAAATACAGTACAGGCAGGCTTTTATCTAGAGTGGTTGGATACTGGAATGGCAAGAGGTCTGGAGCTGGGCTTATAAAAGCAAATTCTGTAGAAGGGCATGGGCTGTAAGTAAAAGGACTTAGCTGTGACCACTGTGACACTCCCTAGGGCCTCAAGCATCACACCTATCTTGTCAATCTCAGATTTGTCAGATATTTGTAAAACAATATTGTAAATTTTAGGTAAGTCATCGAGTAAAGGTTTAAGGTTAAGGTCGGTGCTTAGAGTTCAAAGCAAAAAAGGAAAGGGCACTGTACTTGATGTCCTAACAAGCCACTCTTAATCCTTCCATTTGAAAGGGCAGATAGTGTTAATAGAAATTAAGACCCAAATAGGTGAGGGACTGTTGAGTGGCCAGATTTTTTCACCCGTTTCTCCAGACAGATATGAGGTTGTAGGTTAGTGATTCAGTTTCAGGACAGGATGTCAACCCTACTATGACTTGTAGAGTAGAAATACCTGCCTTTGACAGATGAAACAACAGCCACAACTCCAGGCTCACCAGATGTCTGTGGAAAGCTCACCTCTAAGAAACTATTCGTTAGGACGTAGTTGTATCCATTCCTCTTGACAGAATGTTAGGAGAAGCCTTGCTGTTTCTAGGCTGCTACTGGTAAACCAAGAGGAAATCTCAGGATGAATTCCTGTTTGCTTTGGGTGCTGAGACATTCAGAACCAAACCTTATAGCTGGATTTTCATTACTGTGACATTCTGTAGCTTGTATTCAATTTCCTTTTGCGGTCCTGCCTTTTTCTTCATGTCACTGTCTTTCTTTCATCTGCTTATTTTTGTTGACTTTTATTTGTTCTTACAATATATAAACTATCAAGTTTTTTTTTTTTTAATCTAAAGCAGAGTCTAAACTGCCACATTGAGCAGATTCAGGTTTCTAGATGTAGACCACATTAGAATGCTGGAATATAATTAGAGTCCTGCATCACAGGGAGAAAAACACCAGTCAGGAGAGATGATGGAAAGCTGCATACGGGATACCCCTGACATCTCAGATTGGTAAACCTGGAGATAACACCCAGCAAAATTCTGCAGCATTTTCTATTTAAGTTTATGAGAGCAGGGATCACTGCATGGTGAGATAGTAGATGGGAGGGAACAGAGGTTGAGGCCAGAGGAGAAGTTCTGTCTGTAGGTCTGCCACTGATTACCTGAACTGAAACTGAGTCAAGTTTTTCTGAACTTGTTTATTTACAATACAGGGAATAGACCAGGAAATCTCTTAGGTTTCTTAAAAGCATTAAAACTGATTTGCACTTCAAGACAATTTGGGTTAATTGCTGCCACTGCTCAAAAATATTTTTGAAACTTTTTGGAACAGTTTGGACATCCAGTTCTCTGAAGGTCTCAAGAAAAGTAGTGTGCACTTTAGCCGTGTTTCATTTTGCCAGGTATGGCAGTACCTACCTAGTTTAATTCACATCGGTTTCTTAATCTCAAGTGACTTCACTATTTCTAAAACTAAAACCTCCCTTGGTAGGAAAATTTGTCTCTTCTCCTTGCGTTTGTCACTCAGTCATGTCTGACTCTGTGCAACCCCATGGACTGTAGCCTGCTGGGCTCCTCTGTCCATGGGATTCTCCAGGCAATAGTAGGGTGGGTTGCCATGCCCTTCTCTAGGGATCAAACCCAGGTCTCCTGAATTGCAAGGCAGATTATTTACCATCTGAGCCATCAGGGATTTACCATCTGTGTCCCTAGTTAAGTATGTATAAAAATTTAGGTTCTGCTCCAAGAAGCAATTCAAAAGTATTTTTTCAAACAATGGTAGCATTGGTGGCACTTAATATATAGCTTTCTGAAAGTACTTTCTTTTAAAGGACAAGGTACTAACGTAGTGTACTCTTTTAAGAATTTAAAAAAACTCATCCTAATTAACTCATTAAAATTTGAGAAAACGGCTTTAGAGTCAATGAAATATACAGTATATAATACCCTAAACTACCTTTTTCTGTTGAACGTTTTAGAAAAGCTTAGATTAAGACAGATGTCTAAATGTAAAAGTTGTGACAGAGGTGTCCAAACCTGGCTGCACAATGAAATCACACTGAGATTTTTTTTTTTTTAATACCAATGCCTGGCTCCCCCTTCCACACATAATTTAAGTGATAAGGGATGTGACATCGGCAAAAAATCTTCACAGGTGATTTCCAGCGTGCAGCAAAGTTACCACTATTTCAGTGAATTCATGTCCTACAACTACAATGTCCTACAAGTAATTTGCAGATTCTGTAAAACAGTTTAGTATCCACCTTTCATGCACTTATCACATCATTAAAACCTTGTAAAATAAGATTTTTTTGTTTAAACATACAATGGGAGAAAACTGCTGTTACAGTCTAGAGTTTTGTTATGGAGCATTTTGCTTTAAATATTCATGTTTTTCTAAGTTCTTAACTTGGAAGTTGTATCATTTATTTATAAGTCCTGAACCCAGAGCATTACTGCTGAAGTGCACTGTTTAAAAAGATAGCTATAGGTACATAAAAAGTAGATAAATGTCAAATCAAATACAGCGTACCCAAAGATATTGGGGGTTTGGTTCCAGACCACTACAACGAAGCATCTCAATAAAGCATCATGTGAATTTTTGGTGACCCAGTGAACACAGAAGTGACATTTGCATGACATTAGTCTATTAAGTGCAATAATATGATCTCCAAAAAAAAAACTATGTACCTTAATTCAAAAATATTTTATTAACTCGTCATCATCTGAGCCTTTAGTGAGTCAGTTATTTTTCGCTGAAGGAGGAGGGTTTGAAATATGAATATTACCAAAGAGATGATTGCTGTTGGAATAAGGACAGTGACAGACACGTTGACAGCAGTGTTGCCACAGATCTTAGGTCTGTATAAAGCAGTGTATCTGCGAAGTGCAGCCTAGTGAAATGAAGTGTGCCTGCAAGTCTCCCTGCTGCACTTGTGTTTCTGGCATGATTCAGGAGGCAGATCAGTGTACTTGCAAAGGTGGGGAAAGAGTGTCTTATTCTCAGGAGGACTGGCCGAGCTCTAACTGTGGAGGATGACAACAACGAAGGGACTGAAGGACAGGTGAACCACAAGTACAGAGGACTTGTACTATGAACAGTGAAAAGCCATGAAAAGGGAAGTTGCTGGAATGGCTGTGGAACTCAAAGTAGGGTTCCTCTTGCCTCCCCAAAGTGTGCTCTAATATAGATCACGTATGTAATGTCCTCACATAAAGTAGACCAAGAGGCTTAAAGGATCACGGGATAGGTACTTTATAAGCCCAAATATTGTTAAACCTGACTCATTTGCATACAGGGGTCAGAGTGGCTGATAATGAACCAGGTGCTATGTCCCTTACATTCTGGTTTCACAGTCATCCCCCTAATGGAACTGCCTCTTTATTGTCACTCCATCCATTTTGGTGGCTTTTTCTTTGACCTTACTTGCTTGGCCCTTCCTGGTACACTTAAGAATGTTCCCACCATATCTTGAAATGTGACCTCATCTATCCTGTTGCCTTTCTGTGAACAATCCTTGATCTCCACTTGCTGATTACTTTTCCTCTCTCCTAGCCCTTTATATACTTGATGTTTTCAATCTTTTCTCAGAGTTCACTCAGAGTAGACTACCCC EMBV3_11055 GTGAAGGAAAACCCAAGCCTGCAACTTCAGCATTAGCTAAGAGCTTAGAAGATGCCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25556 GTGCTGATAAGAACACAGATCCAGAAACTCTGCTGTGCGAAGGATAAGAGCCCAGTGTTC Gene GeneID:510073|CD7:NM_001098922:63_cdna Constitutive 0 NULL GeneID:510073 19 GENE CD7 MGC159588 CD7 molecule EMBV3_06843 CAAGGAGGAGTGTATTTGCAGTGGCCCTGAGTGTGTACTGTTACCGTGTCAACCGGCGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43702 ATTTATGAGGGTAGAATGGATTCAAATAGGGTGTATGAAACAAGGGGAGAATGTGGCCAC Gene GeneID:507240|PRPF38A:NM_001075307:28_cdna Constitutive 2 NULL GeneID:507240 3 GENE PRPF38A MGC140421 PRP38 pre-mRNA processing factor 38 (yeast) domain containing A EMBV3_34532 CCGCCCCTGCTACCTATGGATCTTAGGAATTGAGGAGTGTCCCATCCTTGGAGCTGAAAA Gene GeneID:528453|SFN:NM_001075912:197_cdna Constitutive 0 NULL GeneID:528453 2 GENE SFN MGC143283 stratifin EMBV3_09980 ATCACCACTGTCCTAATCGGATGTGTATGGTGCTACTTTACAGGAAACCCCTCGTCCTCC Gene GeneID:100336666|LOC100336666:XM_002689776:3_cdna Constitutive 0 NULL GeneID:100336666 8 GENE LOC100336666 NULL hypothetical protein LOC100336666 EMBV3_06802 CAGAATGAAGAAGTTAAAGAATGACTAGTTCTCTCCCCACAGCGGCTCCCTCAGCAATCC Gene BVV0102_356338 + 0 NULL GK000017.2:46127903-46156461 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42691 AACTTAGCCAGCAAGGGCAAGGTCTCCAAAAAGCCTAGGGAAATGAAAGGGAAGAAAAGC Gene GeneID:532715|IQGAP1:XM_002696571:183_cdna UTR3_Alt 2 NULL GeneID:532715 21 GENE IQGAP1 NULL IQ motif containing GTPase activating protein 1 EMBV3_04248 CAGCCCATTGACTTGTTATCTTCCCAACCGGCCCTCTGAGCTTCTAGATCCAGTCGATGT Gene GeneID:540817|MOBKL2B:NM_001046491:14_cdna UTR3_Alt 2 NULL GeneID:540817 8 GENE MOBKL2B MGC137483 MOB1, Mps One Binder kinase activator-like 2B (yeast) EMBV3_24389 CTCCCCAAGGTTTTCTAGAAGCTCTTGGACCGATACACAGATGCCATCCATTAAGCCCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37115 CGGAAAGAACCTATGGATAGGCTTCAGGGTCTGTAACTAGGTCTCTTAACAGAACCACTG Gene BVT0102_444355 + 0 NULL GK000008.2:62339565-62341237 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17573 CGACCGACGTCAGCTAACCAAGATGCTCAGGGAGCCCTGGATGCAGGGCCTGGCAAGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40728 CTGTCTGGCTTCCTCCTTCAACTGCATCTTCTTGTACACTGGGGAGGTGTACCCCACAAT Gene GeneID:407180|SLC22A6:NM_001001143:37_cdna Constitutive 0 NULL GeneID:407180 29 GENE SLC22A6 NULL solute carrier family 22 (organic anion transporter), member 6 EMBV3_07080 CTTAGGAAGTCTGTTTGATTGCAGCTATGCTGTCCCGTAGGTCCACACTAGAGCTGATAG Gene GeneID:513804|COL17A1:NM_001101980:126_cdna Constitutive 0 NULL GeneID:513804 26 GENE COL17A1 BP180 BPAG2 MGC155048 collagen, type XVII, alpha 1 EMBV3_04076 ATGTCATGCCCACCTTTTGGTTCACCGCTCACCTAGTCTGGGAATGCAAGAAGTAGCACA Gene BVT0102_094080 + 0 NULL GK000011.2:102356916-102371396 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029223 TCONS_00029218 TCONS_00029221 TCONS_00029217 TCONS_00029222 TCONS_00029219 TCONS_00029220 1 XLOC_015690 Coding TCONS_00029220 XLOC_015690 Coding Coding SETX 11:102366170-102461046 j TSS20365 14363 2 TCONS_00029220_16 1168 0.0503376731880526 26 0.848885375494071 0.00044677484075596 0.000132869568960249 0.00137833291293604 0.000843300573545614 0.000595008727791697 0.000416699412249098 0.000558251388772552 0.000465452542473144 0.00078721617013 0.000339768638988408 0.000347054080385412 0.000484650059222319 0.000126631419874737 9.61668898427267e-05 0.000290292203660609 0.00120535970555639 4.27157761441266e-13 1.12142943376063e-09 1.14512038322693e-06 2.52304767261009e-09 8.5204413178805e-12 1.99474093536634e-05 0.000646808215851253 5.91862522726203e-05 0.00115099548582665 0 0.000188669237074596 8.99131039763319e-05 9.76863643263044e-06 0.000811845299236231 XM_001787644.4 SETX PREDICTED: Bos taurus senataxin (SETX), mRNA. 0.0 1.944e+04 99.85 0.752489034324305 NM_015046.5 SETX Homo sapiens senataxin (SETX), mRNA. 0.0 7501 81.09 0.542992411056186 TCONS_00029220_16 sp|Q7Z333|SETX_HUMAN SETX_HUMAN Probable helicase senataxin; 0.0 1912 78.96 0.999143835616438 0 coding 0 0 1 1 -0.0125804453218567 0.927511069699757 -0.0227011663940434 0.694129341439181 GCGCTTCCGCCCTCGGCCGACTGCTGAGCCGAGGCATGGAGGCAGGTTAGCCCTCGGCGCGAGGCCGAGCAGGGTTGAGGAGAACGGCGGGCTGGACGCTGCAGGCCCGGCGGGCCCGAGTGCGCGCGCGGCTGAAATGTTCTTTGTGGAGCCAGAGTCTGGGTGTATATGAATGCAGATCCTCACCCATTCCTAAATAAATCCAGGCATCTCAACTGAGAGGATCACTTCTCTGTAGGCCATCACCTCAGGAGCAGCTCTGATTTCTGCAGCTTGAGGATTCCCTGGACACCTGCATTTGTGGTTCAGTAATGGTTCCCAGCAGTAAAAACGCTGATGAAATTAACAAAACTGCCTTCCAGAAGAAGTGCAGAATGAGTACATGTTGTTGGTGTACCCCAGGTGGTACTTCCACCACTGACTTCCTACAACGCTATGCATCCAGGACCCACTCCAGTGAATTTCAGACAGCTGATGAAGACCTCTGCTACTGCTTGGAGTGTGTGGCTGAATACCACAAAGCAAGGGACGAATTGCCGTTCTTACATGAGGTTTTATGGGAATTAGAAACCTTACGTCTCATAAATCACTTTGAAAGATCCATGAAGGCAGAAATTGGAGATGATGATGAGTTATATATAGTAGACAACAACGGAGAGGCACAGCTGTTCGATTTCACTGGCCAAGACTTTGAAAATAAGCTTCGAGTTCCTCTTCTTGAAATACTGAAATATCCATATCTGCTTTTACATGAGCATGTCAATGAATTATGTGTTGAAGCACTTTGCCGGATGGAACAAGCTAATTGCTCCTTTCAAGTTTTTGACAAACATCCAGGGATCTATTTATTTTTGGTTCATCCCAATGAAATGGTATCTGTATGCTGCTGACCATTCTTGAAGAGCAAGCCATGGATTCACTGTTGTTGGGCTCAGATAAACAGAATGATTTTATGCAGTCAATACTTCACACCATGGAGAGGCAATCAAATGATAATAGTGTGGATCCTTTCTGGCCAGCATTACACTGTTTCATGGTGATTCTGGATCGCCTTGGATCTAAGGTCTGGGGTCAACTTATTGATCCTATTGAAGCATTTCAAACCATTATTAACAACGTGAGCTACAATAGAGAGATCCAGAACATACGGAACAGCTCTGTGAGGACCAAGTTAGAACCGGAGTCATATTTGGATGATATGGTGACTTGCAGCCAGATTGTATACAATTATAATCCTGAAAAGACCAAAAAGGATTCGGGGTGGAGATCAGCCATTTGCCCTGATTATTGTCCTAACATGTATGAAGAAATGGAAACATTAGCTAACGTGCTCCAGTCAGACATTGGTCAGGACATGCGTGTTCATAACAGCACATTTCTGTGGTTCATCCCTTTCGTGCAATCCCTCATGGACCTGAAGGATCTGGGTGTGGCTTACATAGTGGAGGTTATTCACCATCTGTACTCTGAAGTCAAAGATGTTCTCAACCAGACAGACGCTGTGTGTGACAAAGTCACTGAGTTTTTCCTTCTGATTTTGGTGTCTGTGATTGAACTGCATAGAAATAAAAAATGTCTACATTTGCTGTGGGTTAGTTCCCAGCAGTGGGTGGAGGCTGTGGTGAAGTGTGCCAAGCTCCCAACCACAGCGTTTGCACGGAGTTCTGAGAAGTCATCTGGAAACTGTTCCAAAGGCACAGCAATGATATCATCCCTGTCACTGCATTCAATGCCCTCCAACTCTGTGCAGCTGGCTTGTGTGCAGCTGATTAGAAGTCTCCTGAAAGAAGGCTATCAGCTTGGGCAGCAGACTCTCTGTAAGCGGTTCTGGGATAAGCTCAACTTATTCCTGCGAGGGAATTTATCTTTAGGTTGGCAGTTGACTAGTCAGGAAACCCATGAGCTACAAACTTGTTTAAAGCAAATTATTAGGAACATAAAATTTAAAGTACCTCAGTGTAGCACTTTTGTGGATCTGAATCCTGCATGTAAGATGCCTCCTGCATCTTATAAAGAAGAAAGTGAACAAATAGGGAAGAAGTCTGAAAAAGATGTGCACTGTCTAGAAAATTCCAGCCCAACATCTTCTAAAGAACCAATGAAAGCTGATGCATATCAAGTGCAAGAGAGTATTTTGAGCAAAGCAAACAATGCCATAGAAGAGAGTAAAGAGCCATATTATATAAAAGATTTGAAACTAGAAGGCCACCTCTCAGCTGAGTCATGTTTGAAACTGAGTAGTAAAAACCTTGCCTGTGAAAGAGTTCAAAATCAAGTTAAAATAAGTACAGGGAAATACAAGTCTGTAAAAGAGAATTCCTCATGTACCCCACAGAATGGTACTTTAAGAAATGGTCCAGAAAAAGTATTTGACAGAGGAATAATAATATCAAGGCGCTTATTGACTGTTTCTAGCACGGATTCTCTGGAAAAAGTGTCTGCCTCCGATGAGGACTTCTCGTTAAAGGAAGATGGTCTTGGCAAAAGCTCAAAAGCAAAATCTAAGACACATAAAGATGGAGTCTGTGCTAAGTTGTCACATGTAATAAAAAAGCAACGCAGGAGAAGTATCAGTTTAGAGGAAAACCTGACTGTATCTAGCATTGAGGGTTTCTATTCAAAGAAAGATCTAGGAGGTCAGAAAGGAGGTGGAAACATATGCAATCCTTCTTTAGTCCCTAATGGTATTCTGGATGATAAAAATGGAGAACAAAAATCTCAAAGCTGTTTACTGCTGAAAAAGAAAGAAGTAAAGAAAGAAAAGTTAGATCTTTTCTCTACCCCTGAAAACAGTTGTCAAATACAGGAATGTCATGTTGATAGCAAAGATTTGGTCTCACTCACAGAAATGACCAGTATCTGCATGACGAATGCATCTCCCTTTAAAGAGCCTGTGACTGGACATGAATTGAGAGATAGGAAAATTAGTAGGAGCACTGATCAGTTTTCTTCTAATTTAAGAGAACAGGACCTTAGCAGCAGTCCCCAGCCTGACACCTTAACAGATTCTCAGGTAGATAGAGACCTCCACAAATTATCTTTAATAGCTCAAGCCAGTGTTACTAAGTTCCCATCAGATTCAACTGAAAAAAGTTTATCCCAAATACAAAGAAAAGTAAAAGATGAGAAAAGATGTTTCACGGCAAACCAAAATGTCAGGGAAACCTGCTGTGGACAGGTTATTATTATTTCAGATTCCGATGACGATGAAGATGAGGAAAGAATTCTGGGTTTGAAGAAACAAATGAGAGAGGTCAAAGCATGCATTGAGAAAGAATGTCCAGAGCAACATACTTCAATAGCTAACACAAATGTGGAACAGAAGGTATTAATAAAGGAAGAAAATCCAGTGTCCCTTTTGGAGTTTGAGGAATCTGATTCTCAGTTTTTTGAGTTTGAGACTCCATGTGAAGTGTTTTCAGTTTGGCATGATCAGAAACCAGACAAGAATTCAGCTCAAGAGAATGAAAAAAATCCATGCTCGACTCATGTGGGTGATAGTGCAAATGATTTGGGTTATGAGACAGATTATGTGCCTGAAGAGGTCATTAAAAAAGTAGCAGAGAACTTTGAAGAGCGCACAAAACCACGTAGTAGTAGTACTTCTGTTGAGGAATTTTGTGAAATTGAAGTAAAAAAACCCAAGAGAAGACGGTATGAAAAACCTATAGCTGAAGATCCTCTAAGGCCTTCTTCATCTTCTGTTAAAAATGAGGACCAGTCTGATATTCTTAACAAGGGAAATCTGAGTAAAAATGATTTTAAAGGTGTAGACGCAAGATCTACAGTTCCCAGTTCAAGTGTTCAGAGAAACACTGTGGTTTCCCCAAAGAAGTCTCTTCCAAAGCCTCGCATGTATTCCAAACCTGTCAGGAAAGTTCCAGTGGTTAAAGCTTCTAAGAAATCCCATTCAGATACCAAGAAAGGGCAGAGTAAAAGCTCCCATTACATAAGTTGTAGAACAACTCCTGCTATTGTGCCGCCAAAGAAATTTCGCCAGTGTCCCGAACCAACTTCAACGGTTGAGAAACTTGGCCTGAAAAAGGCTCCTCGTAGGGCATTTGAATTGTCCCAGCGATCTTTAGAGTGTATAGTTCAGCTCCGTGACCATGGCAAAACTGTTGGAGTAGTGGATACCCGGAAAAAGACGAAGTTAATTTCTCCTCAGACTCTCTCTGTCAGAAATAATAAGAAACTGCTGACGAGTCAAGACCTTCAGTTGCAAAGGCAGATGAGATCCAAATCACAACAAAACAGACAACGTTTTGATTGTCGAAGCCACTGATACAACACGAGCAGGGCCACGTGCTGCACAGAGCTCCCCCTGTGCCAGAATCAAGTAAGTCAGATTACAGTCATGGAGGAGCCGAGGTGACTGCTAACAATAAGGGAAAACAGTTACTAACATGTCAGTCTTCTGAAACAGAACCCGTGAAAGCAAACCAGTGTAATCCTGTCATAGTAAATGGAAGAATAGCAACAAATGAAGTCATTGTTCCTACCTCAGAGGACCTGTTAGACAGAGGTGACCTAACAGTTCATCATTTAGAGGTGGCGACTTTGAAAGAGGGAGAGCCTCAATTCAGCAGTGACATAGAGGAAGATGATATATTCTTAACACAGCGTGACCCTGAAGACATGGATTTATGTTCACAAATCGAGAGAGAGAATGATAAACTCATTGAAGTCATTCATGGAAAAGATACAGTGCAGGGAGAGGAAGAATGTGTGAGTCAGCCTCAGTTGGAATCTTTGAGTAGCACAAAATGTAAGTACAAAGATTGTGTTGAAACTCTGAAAAACCCAGGTGAGTACTGCTCAAAACACTCAAAAACTAAAGCCACAGATGAAGATGTATTCCGTAAACCTGGCTTGCCTCTGTCTGCATCAAAACGTTCGAGACCTTCCACGACCAAGGTTTTTAGTTCAAGCAGTACTTCACGGATTGCTGGTCTCTCCAAGTCTTTGGAAAGTACCGCAGCCCTCCCATCATCTCTGAAAAATAAGTCAAGTGGGGCACAGTCTGTTCTTAAAGGACCACAGCCACCCCTTACGGTGTCTCTGAAGCCAGTGGCTGAAGTGAAAGGTCTGTGCAATGTTTTCCCTGCTCAGACTCCAAATAACTCCAACAGGCAAGTTCTGAGAGTTCCATTTGGGGAAAGCAGACCTTTTTTGACTTCCTCTCCAGTAAACATTCTCACGTCGTCACAGTCCATCTCTGATACTTTTGTAAAAGAGGTCTTGAAATGGAGATATGAGATGTTTGTGAACTTTGATCAGTGTGGGCCCCCGTCGAGTCTGTGTCAGTCCATCGAAAGACGGGTGCCTATCAGGTTTCAAGACTGTGGAGATTATTTTAATGTGTTTTTCCCTTTGATGGTCCTGAATACTTTTGAAACAGTGGCACAGGAATGGATCAGCTCTCCAAACAAAGAGAAATTCCATCAGTTACATTTACGAAAATTTCCTGGTGATTATAAAAAATACTGGGAGTTTGTGGTTTATCTTGAGGAATGTGAGCTAGCTAAACAGCTTCATCCAAGGGAAAATGATTTGGTGTTTTTGGTTCCTGAAAGACTCAATGAGGAGAAGAAAGATTTAGAGTGGAGTCACCTGGAGGATGCCTGTGAATATTATTGTGGCTATGTTCATAAATTCCGTCGTACTTCAGTCATGCATAATGGGAAATTTGAGTGTTCGGTTTCCATCCAGACTCAAGATAATTTACCAGTCAATTTAAATGAACTCGTGAAATGCTTTGTAATCAGCTCTCTGGTGACTACACAAAGGAAGTTGAAAGCCATGTCTTTGCTGAGTGGTCGGAACCAACTGGCCAGAGCCATTCTGAATCCAAACCCCATGGACTTCTGTACAAAAGATTTACCAACTGCAACATCTGAGAGAATTGTTGCCTACTTAAAAGATTTCAATGAAGACCAGAAGAAAGCGATAGAAACTGCATGTGCCATGGTGAAACACTCCCCATCAGTTGCCAAGATCTGTCTGATTCATGGACCACCTGGAACAGGAAAATCAAAAACCATTGTTGGCATCCTGTACCGCCTGCTGACAGAGAACCAGAGGAGGGGGTATTCAGATGAAAACTCCAACGCCAAAATCAAGCAAAACCGTGTCCTCGTATGTGCTCCTTCCAATGCAGCTGTTGATGAACTTATGAAAAAAATTATCCTTGAATTCAAAGAAAAGTGTAAAGACAAGAAGAATCCTATGGGAAACTGTGGAGATATAAATTTAGTACGTCTAGGTCCAGAAAAGTCTATTAATAATGAGGTCCTGAAATTCAGTTTGGACAGTCAAGTTAACCACAGAATGAAAAAAGACTTACCGTCTCATGTTCAGGAGATGCACAAAAGAAAGGAATTTCTTGATCATCAACTTGATGAACTTTCCCGCCAGCGTGCTTTATGCCGAGGTGGAAGGGAATCGCAGAGGCAAGAATTAGATGGAAAAATTGCCAGAGTTTCAAAAGAAAGGCAGGAGCTTGCTTCTAAAATTAAAGAGGTTCAAGGACGCCCACAGAAGACACAGAGCATCATCATCTTAGAGTCACACATCATTTGCTGCACCCTGAGCACGAGTGGTGGCTTGCTGCTCGAGGCTGCTTTCCGTGGGCAAGGAGGCGTCCCCTTCAGCTGTGTCATCGTTGATGAGGCTGGACAGTCTTGTGAAGTTGAAACTCTTACTCCGCTCATCCATCGTTGCAACAAGCTTGTCCTCGTAGGAGACCCTAAGCAGCTCCCTCCCACAGTCATTTCCGTGAAGGCACAGGACTACGGCTATGACCAGTCGATGATGGCCCGCTTCCACAAGCTCCTGGAGGAGAGTGTGGAGCACAACATGATTGGCAGGCTGCCCGTCTTACAGCTCACCATCCAGTACAGGATGCACCCGGACATATGCCTCTTTCCTTCTAGTTATATTTATGATGGAATCTTGAGAACAAATAGAGGGACAGAGACCAGTCGGTGTTCATCTGACTGGCCATTTCAACCCTACCTCGTGTTTGATGTTGGAGATGGCTTAGAAAGACGGGATAATGACTCATATGTAAATGTTCAAGAGATAAAACTGGTAATGGAACTAATTAAACTTATTAAAGACAAACGAAGGGACGTTACTTTCCGAAACATTGGCATAATAACCCATTACAAGGCTCAGAAGACAATGATTCAGAAGGATTTGGACAAAGAGTTTGATAGAAAAGGGGCAGCAGAAGTCGATACCGTGGATGCCTTCCAGGGGCGTCAGAAAGACTGTGTTATTGTTACATGCGTCAGAGCAAATGCCACACAAGGCTCAATTGGATTTCTGGCAAGTTTGCAGAGATTGAATGTCACCATCACACGAGCCAAGTACAGCCTCTTCATCCTCGGACACTTGAGAACCCTAGTGGAAAATAGACATTGGTATCACCTGATTCAAGATGCACAGAAACGTGGCGCCATTATTAAGACTTGTGACAAGAACTACAGACACGATGCAATGAAGATCCTGAAGCTCAAACCATTGCTTCAAAGGAGCCTTACTCACCCTCCTGCTGTCGCTCCAGAGGCATCCAGACCCCAGGGTGGCCTACCCAGCAGCAAGCAAGATGGTGAACTCAGCAAGACATCTTTTGCTTCTTCCCTATACCACTCACCCTCTGACTCCAAAGAAGCCACAGTCACTGAGGCTGCAAAGGATCCTGAAAGGCCACCCAATCAGGACTGGCTTCGGGACCCAAGACTGCTGCGGAGGATGGGCTTGGCCTTGGATGCCCAAGGAATAAGCCTCAGGGAGCCGCAGCCCTTGAGCCCCCAGCATTCCGGAGCAGCGCCTCCTTTGGGCACCCCAGGCTGCCCTGGGAGTCCCCAGGAGCCAGGCACCATCAGGCAGCAGGGAGTCACCCTGAACAACCACACGCCTCACATGCAGTGTGACTCTCCAGTTGCTAGTACTGACACTTCCACAAGCAAAAAGAAGTGTGACCAGGAAGAGGGGGTGCTCAGCCACAGGAGAGAAACCAGGTCCTTGAGTGTAGGGGATCAGGAGTGGTGGGCTAGCTCCCACGCAAAGAGGAACTCAGACTGGGATGAGAGGGTCCTGGAGGAGGACAGCTGCTCAAAGAAGAGACGGGTTTTATAGTACGGCCGAACAGCAGAGGCTGTCAGCCGCGACCATTGCTGCAGACCTCTGATGACTGACTAACAGGCTTGTCCAGATACGACTGCTTTTTTCCTTATAGGAGTTTGTTGTTGGAAAACAAAACGTATTATAATACATGGGCCTCTTGGTCCTTTCTGTCAGTTGCAGAAGCTTTCAGAGGACATTTGTGCATCAGTAATTATGTCTTTGAAGTAGGAGGCTTGCAGTGTTGATCTCTCGTTCTTGTAGAAAAGGAGGTCAGCCTGGAGAGGTTGTAGAAGTTGGAATGTATATTTGTATAGCAAATAACAAAATCCTTTTAAAATTTAATCTGGTAGATGGCTTTTCTTTCCCCTGCTTAAAATGTTAATCATTTTCAATAGAACAAACCTTATATTAAAAAAAAAAATGTGAGGAGGGCAGGTCCTTTAAACCATTGTTATGACAAAACAGATGTTTAACAGCCCAGGTAGTCTGGCAAGGAGCTGAGTTTAGTGCTGCTGAGTCAGAGGTCTCTAGTTCTATTTTTTAAAAGCAGCTAGAGTCTTCTGGGGAGAAGGCAATGGCACCCTACTCTAGTACTGTTGCCCGGAAAATCCCATGGATGGAGGAGCCTGGTGGGCTGCAGTCCATGGGGTCGGTAAGAGTCAGACACGACTGAGTGACTTCACTTTCACTTTCCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGAGTTCTTGCCTGGAGAATCCCAGGGACAGAGAAGCCTGATAGGCTGCAGTCCATGGGATCGCACAGAGTCGCACACGACTGAAGCGACTTGGCGGCGGCAGCAGCAGCAGAGTCTTCTGGGGGAAACTTGGGAAGCAGAAAGTTCAGTTAGTTAAGTTGCGCTGATGACCTTTGTAGACCAGGCACCCTGACACAGGATAGTGCATTTCTGTGATGAGTTCATCTTCTAGTAGTGAGCACATAGTTCTCCAGCTTAAATTCTCATTCTTCTTGAATTAGGAGAATATGAAAGTATAGTTCTTGACATGTCATTCAGATGCCCCCAGTGTATTATGAGTTTTCTGCAACTCATGGGTTAGAAATCCAGCGGTTGCCAAGTGCAAGATCAGTGCCGAGGTGTCTTGTGTGAAAGCGTGCATTTCTTGGGTTGAGCCAGAAAACTGGGTGTTCACCATCTTCCCAAGGGGTTCCTGGGGACTTGAGACAATATTTTAGACAGGAAAGAGACAGCCTTTAAAAAGAGCAGGCTGGAAGAGCAGCACGGATACTTGGGATTTCAGAACCAAGGAAAGAGTTGACAGATTTCCTCTTGTGTCTGGAGACCATTGTCACTGATGCAGATGCAGCGCTGTTGCGGGACATCTGGTTAGAGGGCTTGTGCTTCTGTGAAAGCAAGTGGCTGTAGTGGGTGGAGGTCTGGAGACTTGGGCGTGGGCAGGGCTGCCTGATTGCAAAGCCTGGCTTTCCCTGCACACAGTGGTGCTGAGGTCTCACAAACGCAAGCGTGTGTTAACAGTCGACCTGCGTTTGAACCCGTGGTTGGTTGTGTACACCGTGCAGCACCCCAGCTACTCGGGGGTAGAGAGCACATCCCTGAGTGTGAACGTGCACCCTCTGAAGTGTCTCTGCTCTTCTGCTTTTTAAGCAGAAAGGGCTTTGTGTTCGTCAGAAATTGTCCTGAAGCAGGTTATTAAGAGCTTTAAAAGAGCGTTTGGTTGCCAAAGGTTTAAACACTCTACTTCTCTGTTCCCCTTGTCCCTCTCACTGCTATCTAGACCTCTGCTGATGGGCGTGGATATTCCCTGTCACCTGGGGAGCATGCGCTCTGTCCCCAGAGTCAGCCCCTGTTCCCCCGTCACGGAGGTGGGCCGAGCCCTACTTGGGGCCAGGGCTTTGTAAGCTTCCTGCCTGGCCTTTGGCAAGAAAGCTCTTTGTTGCTGTGTTTATTTTCCTCCTGTCTTGGTAGAATGCTTGATTTAGCAGACAGTTGTAGTGATCAGGGTTTAGAGAGTCTAGAAGGTGTTAGCTTATAGAAGAGGTGTGATGGACACTGCTGGGCCAGGAGCTTTCCCCATGCTGCTCACACAACATGAATTTAAGGCAGGGTCTGTTGCCTGTTCCCACATGTCATGCCCACCTTTTGGTTCACCACTCACCTAGTCTGGGAATGCAAGAAGTAGCACATCAGAACACCTAACGAGCACGTGTGTCCTGACAGTCCCTCCCAGCAGAAGTGGTCATACCGGACATTGCATTGGAAACGCACCGTGGTTCCAGTTGGCGTACTTTATGTATCTGCACAAAGCACTTCATGTGTACCGTGTGGCCTTTCTTGATGTAGCTGTCACAGCAGTGTTGTTGATGGGCGGTTAATCTGCAGGTGAAAAATAATAGCTGTTTGTTTTGTCCTTGCCATGGCATTATAAGAAAGTGCCCTGTCTTCTTTCAGTCTTAATTCTTTCAACATGAAAATATTCTACTTAAAATCTTGTTTTGTTTCTTTGTATATGATTTGCCTTGAAATTACTGTGGACAGTTTATTTAGTTCTGTTTTCATGTATTATCAGGAGCAGATTTGATAAGTACATGTGAATAACCTCCTGTAAATGAGTTTTATAACAAAATTGTACTAAACTATTTTCTAAAGTCAGTTGTGCAGATTTATAGTTTTCTTTGCTGTAGTTTTCTTTCTATGCCCTGAATTCCTAGCCAGGATTTGGCAAACAATAGCCCTGTTGTCTCTGTTAAGATCTGAATATTGAGGAAATGGCAGAATTAAAAGCAGAAACAAGAAAGCTGACGCATGTTAGGAGTTATTGAATGGAGATTCAAGGGACTTCCAGGTAACTCGCTTAGTCTGCCATTGGATTGATGTTTTCATCCAGTCTGCACCCACGGTGCTCCTAGCTTCTCACCTCTTCTTGGAATCTTATCCACAAGGTAGTGAGTGAGGTACGTGTGGCCAACTGTGGTGTCAGTTACCCGTTGAGATTTGGTCCAGAAACACGCTTACCTCCAGGCTGAGCTTGGGAGAGCAGAGCAGATGAACAAGGACCCACAGAAGGACCTGCGGGAGCCCCAATGGCGGGGCTGGAGGCAGATGGCCAGGCCGGGGGTAAGCGCTGGTGGTTACAAAGGAGAGCACGTTCTCCAAAAGCAGTGGCTTCAGGAAGGACAGTTGGACATGCTGAGCTCCACCAGGATGTGGGCCCCGCCAGCCTCCCTGGGCCTCCCACTCATCCGGGATGGAGGCACCCACCGCCCGTGAGGGTAAAGGGACGACCTCGAGGGGAGTCCTGGGGCAAGGTGAAGTTGCCAGGAGACCTGATGAGAGGCGGGCGCTCTGTGATGGCCGTTTTATCCATGCAGTTGGTTCCTGCAGCAGCTGCCATGGGGGTTTTTTAAATCTCTCCTGACCAATACAACTGGCTTTCACCATTTATTGTTTGAGGAATAAATAATTCAAAAAGAAAACTAAAATTTAGCTTCAATTTAAAGTAGAATTTACAGCGTTGCACAGTACCATGAAGGCAGTTTCTGTACACAAAGGATCCCTCAGTAACTCTTAAAGGACTTGAGTTATTGTCACCCTGTGCTACTGGACAGGAGGTGTTTGCCAAGTCAAACTGCGTAAACGGTGTCCACAGGTGGACGGTGCCCTGACCCACGGGAACTCCGACCCACGGGAGCTGTCTCTGTTCCCTCCTCCCTCCAGCTTGGGCCAGCTCTGCTTGTGGCCGCTGTAGCCTTTGTTCTCAAGCAATGTTGCAAATCGAATTGTTGGTACTTTTCAGCCTGGGAGGTGTACCTGGGAGTCACCCAGAGAACTTTAAAAATTCCCTCTCCTGGGCTGTCCCCTAGAATTGCTAATTCCTTGTGTCTGGGAGAAAGTACTTGCTGCCTTTAAAAAAAAAAAAAAAGCTTAAAAGTTGAACTCACTGCAAGGTGATTGCAATGAGCGGCCAGCCTTGAGGCCTGGCTCCTCGCGTCAGCCCTGGGGCCCATCAGGGTCCAGTCTGTCTTCTTCAGTATCTCGTCCCCTACAGGGGCTCTGGAGGGGGTGCGGCCCACCCCCAGAAGCCATCTGGGCAGGCATCCTTTTGTTGAGATTCCCAAGGGCACCGCAGTGGGACTGGGGAAGGAGAGCCAGGAACAGCTCAGTCAGGGGTTGGCGGGTCCTGATGCCATAGAGAGCAGGAGTTAGAAGCCTGCCTATGGAGTCTAGGAAGGGCCAAGTGAGCCTGCGTCAGGTTTGAGCAGGAGTGCCCACTGAGCTAGCCATGGAGGGGCCTGAGCAGGGAGTAGTTGGTCACGGAAAACGAGGCAGGGGGTCTGCCTTAGCTCTGCTCTCGGCTGTGGACAGCTCCTGAGGGCCTTCTGTGGGTTTTGCTTTCTCCGCCTGAAAATGATGGTCGGGGTGTTAGTTCTTTTTCACCATCAAGTTTTAAAATTCCAAGTCCCAAACGCTGGCGTCCAGGAGAAGAGGATGAAGAGCACAGTGCGAACTTCCCTGGTGGTCCAGCGGCCAAGGGGTCTCCTGATTCTCAGAGCTCTTGCAGCTCCACATTCAGAGACCCCCACTGCCCCCATCTCAGATACTGACCCAGAATCACCCCAACACAGCTGGGCAGGGAGCCCGCCGATGGCACCCGCCTTTGCCCACATCTTGGTGGAGAATGTCCTCAAAGATTCTACTTACGTTTATAGTTCCTTGGGTTTCATGACAACGTCGTCGTTCAGTTGCTCAGGCGAGTCCGACTGTGACCCCATGGACTGCAGCACGCCAGGCTTCCCTGTCCTGCACCTTCTCCCAGAGCTTGCCCAGACTCACGTCCATTGAGTTGGTGATGTCATCAACCATCTCGTCCTCTGTCATCCCCTTCTCATTAGATGATTAAAGCAACAAATGAACCTAAAACTAACTTTCTTAGGTCCCCTATACAGATCGCGTTGTCTACCCCTGCACTGTAACAGATCTGCTCAACAGAGCTAACCCTCTGGGGGAAGCAGCAAGAGAAAAGAGATTTCAAAAATAACAGCAGGGGCTCCCCACACATGTCACTCCTCAGGCCCCCAGGACATCGTGTCCGGGCTCTGGGCGCAGGGGTGGGTTTTCTCTGAGGTTGGGGCCTCTCTCCTGGTCCTCCAGAAAGTGGCAGAGCATTGCCAGCACGTCCCTAGCCACATGCGCCCCTGGTATCTGTGAGTGACTGAGATGGTTGACTCTGATCTTTTTATACTCTACTGCCATAAAAAGGCAGTTTTATAAGCTGCTCTTACAAATCTGTTGAGTTTTTTTTTTAATTAAATTTTTTAAAGAAAGAATTGAGAAATTTTACTTAAGGCAAATTTGAGGATAACCACCCAGGAAGAGCATCTCAGAAAGCTCTGAGAACTGTTCCCTGATTTTCTTTTTAAACCGTCAAATGCCACCTCTTCTAACAGTATTTAAACCAATCTAGTAAATCTAATCAAACTTGGTGAGTCTAAAGTTCTTTTAAAAAGCCCATTTAATAAAACAGTCTTAAACTTTTCCATTTAATCCTAAACTGAGCGATTCAGTAGGTTTCAAGTTGAAATAACTAATCTGATGAAAATGCCAAATTTTCTTAAAAACCCTTGAGCCATCAAATACACTCTAAATAACAAACATAATTTGATATAAAAGCGTTAGCATGGTTTCAATTTACTACATTATCTTGTTTAATTTTCAGTCTTTCCAAAGTTAGAATGCAGCCGAGATGGGATGGTTTTATCTTCCCGAGTGACTTCAGTTTGGCATCCCAAGCAAGTTGGGCTGCAGAGCAGCTAAAGTCATCACCCAGGTGATGCTGTATGTCCACAGTGGTGGTCAGACCACTGATTGGCACAGACCTGGCGCTCAAAGTTCTTGTGAAATAAACTGTACGTCAGAGCGTATATGAGGGTAATGGAAAACGAAAGACATAATCAACACCTGTGTACCACTGCCCCATCACAGAAAGCAGGACACGGCTGACGCCTGGAAGGTCACTCCAGGCTTCTTCCAGACATCCTCCTGCCTCCCCTTCCACCTAGTTGTAAACATCATCCCGAATTCTGTAGTTTGCATAAAGTTTTGTCAGTTCAGTCGCTCAGTCGTGTCCAACTCTGCGACCCCATGGACCTCCCTGTCCATCACCAACTCCCGGAGCTTGCTCAAACTCATGTCCATTGAGTCAGTGATGCCATCCAACC EMBV3_17835 GGTCGTGGGGACTATAACCGATGATGTTCGTGTCCTCCTCTCTGGTCCTCGTAAGGGCCG Variant GeneID:509163|RPL18:NM_001015556:163_cdna 296^430 3 EMBV3_02460 GeneID:509163 18 GENE RPL18 MGC129138 ribosomal protein L18 EMBV3_26342 GCAGGCCTACTTTCCCATGAGGAGTGTGAATGTGAAAAATCTTGACCACTGATTCCGGGG Gene BVV0101_015057 + 0 NULL GK000005.2:56029203-56031276 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191889 TCONS_00191891 TCONS_00195048 TCONS_00195049 TCONS_00191890 2 XLOC_117048 XLOC_117903 Coding TCONS_00195049 XLOC_117903 Coding Coding MARCH9 5:56029275-56036194 j TSS145410 4474 1 TCONS_00195049_1 212 0.00827000447027269 4 0.353859496964441 0.000139878181975895 0.000377476028571709 0.000178116752967701 0.00032202051983735 0.000293327034275654 1.6484487510157e-09 0.000454695697245978 0.000547259237187634 0.000304685150629984 3.23849136486621e-05 1.43938122358175e-06 3.84631485141683e-14 0.000252490855563301 0.000396548038876428 0.000415335496202186 1.89519882745367e-05 7.23231035571392e-11 3.402401425878e-18 0.00022802117917393 0.000716658376413632 5.5574578540842e-17 1.65433745139948e-12 2.58340707167725e-10 3.08879935962251e-31 0.000246815301173099 4.69814083925107e-09 0.000416223064463345 1.99054361736778e-23 5.74954554286525e-12 5.3703217576176e-11 XM_003582222.2 MARCH9 PREDICTED: Bos taurus membrane-associated ring finger (C3HC4) 9 (MARCH9), mRNA. 0.0 2563 100.00 0.317389360751006 NM_138396.5 MARCH9 Homo sapiens membrane-associated ring finger (C3HC4) 9 (MARCH9), 0.0 1523 91.97 0.234912829682611 TCONS_00195049_1 sp|Q3TZ87|MARH9_MOUSE MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9; 1e-148 422 99.53 0.995283018867924 1 coding 1 1 1 1 -0.16045866101856 0.208153024977821 0.00448668701028289 0.941478848656289 ACCGCCGAGCGCACGGGCCGAGCCGGAGCCGGAGCCGGAGCGGGACTGGGGCCAGGAGGACGGCGATGGGGGGCGGCCCCGGCGCAGGAAGACCGGGGCTCGTAACCCCGGGGGCCCGGCCCGCTCCGGACCCGGACCCGCGGGGCGCGGCACCCTGAGCCCACCCCCACCCCGCCCCCTGCCCCGGCCATGGCTGCCCGCCCCGCCGCCCCCGGGCCGCCAGCCCTCTCGGCCCCGCAAACCCCGGAGTCCCGGCGGTGGCAGCAGTGAACGGCTCTCGCAGGCCCCGTAGACCCCAGCCGGGCTTGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCTTGTCCTCTCCCTTCCCCCCGCCGCCCGAGAGCCCCCCTTGCACGCCGCCCCCCGCCCCCCGCCCCCCGGCGCCCGGACGATGCTCAAGTCTCGGCTCCGCATGTTCCTGAACGAGCTGAAGCTGCTGGTGCTGACGGGCGGGGGGCGGCCCCGGGCCGAGCCGCAGCCCCGGGGGGGCGGGGGAGGCGGCTGCGGCTGGGCGCCCTTCGCCGGCTGCTCGGCCCGGGACGGCGACGGAGACGAAGAGGAGTACTACGGGTCAGAGCCGAGAGCCCGGGGCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCCGCCGCCGCACGCGCCGCCGCCGCCGCCCCCGGGCGCTCTGGACGCCCTGTCGCTCAGCAGCAGCCTGGACAGCGGGCTCCGAACCCCTCAGTGCCGAATCTGCTTCCAAGGCCCTGAGCAGGGGGAGCTCCTGAGCCCCTGCCGCTGCGACGGCTCAGTGCGCTGCACTCACCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACTTCAAGTACCAGGTCCTGGCAATCAGCACCAAGAACCCCTTGCAGTGGCAGGCCATCTCCCTGACGGTCATCGAGAAGGTCCAGATTGCAGCCATAGTTCTGGGCTCACTCTTCCTCGTCGCCAGCATCTCCTGGCTCATTTGGTCCTCACTTAGCCCTTCAGCCAAATAAGCTGTCATGGCTGCTGGAGGTACCACCTGGACAAGGTGTTTGGGGCACACTGCCTCCACCAATGAGGATCTCTGTGGACAGCTTCAAGCTGGAGACATTGTCTGGCCTCTACTGCCCACTGGGTAGAGACACCTGGATACATTCCAGCCCCCACTGACAGCCCCTCACACTCATCCTGGGGCAGCCAGTGGGTAGGTGGGGAGAGCATCATTTCTTCCCTAGAGAACCGTCCTTACCTCAGCTCCTAGGGCCTCCAGCCCCCCAGCTCCACTATGGTGACTTGGTGAAGGGGGACCAGTGCCAGAAGAAAGGGGCTGTAGACCCCCCCGTTCCCTACCCCATGGCCACAGGGCAGCTGGCAATAAGACTAGTATACATTGACCTCCCGTTCCCTGCATGAGGGCGGGGGTACTTCCCTGTGCTCCACCCCCCCATTGCATGGGGGGAGGGGCATAAAGAATCATTTATATGCACTTGGAGACTCCTTTCTCATCTGGGGGTTTTCTGGAGGTTTGGGAGGTGTGGGGAAGTTTCTCTGCAGAGGTTGCAAATCCCAAATGCAGCAGTGGTTTCTGAGTTGGAGGTGTAACTCCCACTTGGTGGTGAATAATTCACATTGGCTGCTAGGTGGCAGCGCTCAGAAGCATTTCAGGGGTGGACCTGACACCTGGGTGTTGTGTGATTTGGAAAAAAAGTCTCCCCACCGTGGTTTTCCTGTCTACCTCATAGGGCTGGATTGAGGATAAATGAGGGACAGGTTGAATGCCATTGTAGGGAAAATCATTGATGGCATAAAAAGATTTCTAGACTAGTTCATGGTGCATTTATTTCAAATAATAGCTGATTTACAAATTCCAAAATGTTTTTCAACTGGAGTTACACAGAGTCTTGGAAATTTGTGTTAAATATCATAATAGATACGGAAAATTTGAGGGGAAATAGACATTGCAAATGTGAAGGATGGTGGTTATTTGCAAGAATGAGAGCTCCTCCAATCCCCTAAACATTGGGGGCTGGAGCAGTCCTTGTTCAGGGAATCTTGCAGGTTCTATCAATCCCTGCTAGGTAATGTGCTCACCAGGAGAAGTGGTGTGAAGTGAATTTGGACTCGTTTGGAGTGAGACAGACAGACTTTCCCAGGGTTATGAGTCTCCAGCCCCAGTTTAAGCTCCCTTGTTCAGGGCCACAGGTCTGATCTTGGTGTGCCCCAGCTAGTTGATATTAACTGGAAGATCTTGTGCTTGGAGGCAGGCACGTAGAGGGCTGAAAAAGGTTTGGGAAGGACTGATGAAGATGCCAGCATGATGCCTGGTCCCTTTCTCTTGCGGCCTTGGGGCTATGTGTTATATGAAGGATGGTGTCTTTTACGTGAACTATTGATCAGCAATTAAAATAATTACTTCACAACATTGCTTAAGTCAGATCCAGAGACCTCTCCTATTATTGGTCCTCCTCTCAGGGAAGGCTCTGCTTTGTCTTCTCCCTGGGGGTGTTTTGGGAATGCTTCTCTATTAAAGGTCACATATGCTTGCCCAGGAAATGGTCCTCCCCAATCCCTCTCCAAAAGGGGTCTCAGCCGCTGTCCATGGTGCTGGCACCCAGACTCGCTTAGGAATATAGGAATCAAAGCTGTACTTGGGTGTGAGTAACCTGGAAGTGTTGAAGTGTATCACCTCCAACCTCAGAGGGGATTCAAGTGAAGAGAAAACAGGCTGAGCCCTATCCCCCCGCCCCAACTTTTCCAGTGGGAAATAGTTTCCCCAGAAAGATAACCTTCCACATTCTCCACCTGGGGACACAGAAGGACCAGACTTCACTGATTTGCCTTTCACAGACTAGCTGGTGAGAACCAGAAGGGAGACAGCAAAACTAAGTGACTCCTAGTTCTTATCCAAGTAGATAGGGTTTAGGTAGGTATGACACAGGTGGGGTTTCCTGTGCCAAGCCTGAGCTTTCCCCCTTGATGGCCCCACATAAAGGCTTAGATATAACCAAGAATATAGGCACTTAATGTACAAGCACACTGTCCATTTCCGTGCTGGGTCCTAAAACAGGGCTAAGTGAGACAGCATTTTCCCCTCCCCTTCAGGACCATTGGAGGTATAGGTATGGAGGTTGGGACTGGCAATCTATATTGTCCTCTCTCCTTTTTCCACCTTTAAAGGATTATTGTCCAGGAAAGGGTCAGAAGGTCTGCTGCCCTTCTCAAGTGAGCAGGCCTACTTTCCCATGAGGAGTGTGAATGTGAAAAATCTTGACCACTGATTCCGGGGGAAAGGGTCTGAGAGGAAGTGGGGAGTTACTCTCCCTCTAAGCTCAGAACTGCCCCAAATCAGGTCACTTAGGTTCAAGTTGAGCTAGTGATAGTGAGTAGGGTTAGAGACTGAGAACGCAGCTGAGAAGGAGCTTAGAGGAGGAGCAGTAAAAGCACCAAACCTTGGTCTTTGAACAGGGTTGGGGGTATACCCTTACCCCTCTGTAGATCTTAACATAAATAGATAACCCCCAGAAGGCTAGTGGCTAATGGAGTTTCTGTGGAAGGGAGCCATGTCTAGGGCAGGGGCTGAGGTAGTGAGAGGAGGAGGAAGTGTGAAGTGAAATCTCCGTCTCCATCTGCTAATTGGAATGGAGGGGAGCAGGAAGAAGGAGGACAAGTCCTGACATGGGGTGGGTAAGCTAGGCTACAAAAGGCGCTGCAGGGAAGGTGCTGAGAGATTTATTTGTATGGAAGATGAGTTAATCTATATACATTACGAGTAGAGAACTGAGTCCAGCCTCTGGGGGGGCCAGAGAGTGCTGACTCAGGGGAACAGGGACTCTTGCGGCCCACTCCTCTTCTGCTTTGGTGCCCTAGGGCTTCTAGCCACCCTCACACTTGGCGTTCATCCTCTCTGACATCACCTCTCTGTCTGTATCCTTATCTTTCTCTGAAGGAAATTACCTTGGAGCAACATCTCTAAAGAGGGCAGAGTGGCCATGCTAAGGTGTCCTTTTAGTCCTGGCAGTCCAGGTTCCAAAAGCACTCGTCTACCAGACAGTCAACCATCTCTGCAAGTCCCTCCCCACCCCTTTTAACAGCCTAGCCCTTGAAGCTACTTTTCAACACTACCCTTCCTCAATCTCTTACAGGCAGCCAGACTTGGCTGTTCCCACAGATAGAAATGTGTCTGGGTTTGTGATGCAAACCTTTCTCCCAAGTATCTAGACCTCCCATTGTTATGGAGGCAGTGGGGGGGGGGCCCCCCCCCGGGGGGCCCTGCGGGTGGTCACTTCAGGGACCTGAGAAACCAAAGTAGGGAATCTGGGTCAAGGTCTTACCTCCAGGTCTTTGTAGGAAGTGAGGGAAATAAGTCAGTCAAAAGTCAAGGATGGAACATTCAAAGCAATTTTTTAATTTGAAAACAGTATTTAAAAAACT EMBV3_32176 GATAAAGCTCATGGCCTACCAGCTAGAAAGTATCCTTGCCATGAAAAAGAGGACGTGATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09559 TGTCTTCTACACGATGATCACCCCAGCCCTGAACCCCCTCATCTACAGCCTGAGGAATAA Gene GeneID:100125776|LOC100125776:NM_001105049:2_cdna Constitutive 0 NULL GeneID:100125776 15 GENE LOC100125776 MGC179427 olfactory receptor EMBV3_40819 GCTGAAGGGCTCATTTTTAACTGGAAGCAGAGTTGGGACCTGGTGCAACAAACACAAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36525 AGACACCCAGCGGCCCCCCAAACTAGTCAAACTCGGCGCCCCCCGCGCCCCAACCCGCTT Gene GeneID:100140633|LOC100140633:XM_002696908:405_cdna Constitutive 0 NULL GeneID:100140633 22 GENE LOC100140633 NULL hypothetical protein LOC100140633 EMBV3_14386 AGCTGTTGGGCTATTACTGCATATGGCACAATATTTAATATTTGCAGGATCATCTCGGGG Gene GeneID:527056|RNF6:NM_001098062:58_cdna Constitutive 0 NULL GeneID:527056 12 GENE RNF6 NULL ring finger protein (C3H2C3 type) 6 EMBV3_06034 CAGAAGAGGAAGCGGGCCTCAGACTCCTGGAGCAAAGAAAGGAGGCGATATGAGACAGCA Gene GeneID:515877|LOC515877:XM_002692256:1559_cdna Constitutive 0 NULL GeneID:515877 13 GENE LOC515877 NULL similar to Uncharacterized protein C20orf151 EMBV3_39335 GGCCATCAATCATTTCTTCTGTGATGTCCCAGCCATGTTGACTCTGGCCTGCATTGACAC Gene GeneID:787946|LOC787946:XM_002689086:5_cdna Constitutive 0 NULL GeneID:787946 7 GENE LOC787946 NULL similar to Olfactory receptor 2L8 (Olfactory receptor OR1-46) EMBV3_40802 CATGCATCCCCAAAACAGACCCTTTTCCTGAAGTATTAACAGCATCAGTTTGGTCTGCCG Gene GeneID:504439|PAPSS1:NM_001034210:23_cdna Constitutive 0 NULL GeneID:504439 6 GENE PAPSS1 MGC127389 3'-phosphoadenosine 5'-phosphosulfate synthase 1 EMBV3_11553 TCTGGAGCATCCTCGGTCCACACTCACAATCCTCCTCTACAAGAGTGTTCCCTTCGGTTT Gene GeneID:513785|GABBR1:NM_001098963:5_cdna Constitutive 0 NULL GeneID:513785 23 GENE GABBR1 MGC140191 gamma-aminobutyric acid (GABA) B receptor, 1 EMBV3_00625 CAGCAAGATGGCGTCTGCCAGCAGGGTCGTTCAGGTAGTCAAGCCACATACTCCATTAAT Gene GeneID:613835|MRPS36:NM_001035438:3_cdna Constitutive 1 NULL GeneID:613835 20 GENE MRPS36 MGC128564 mitochondrial ribosomal protein S36 EMBV3_22678 CCATCTGGAGCTTACTTTGCCTGGAAAGCCACAGCAATGGGAAAGAACTATGTGAATGGG Gene GeneID:539141|PSMA2:NM_001034662:58_cdna UTR3_Alt 5 NULL GeneID:539141 4 GENE PSMA2 MGC127174 proteasome (prosome, macropain) subunit, alpha type, 2 EMBV3_09489 GTGAGCATGTGATTGAACTGCTGACCAAAATATGCCGGGCTACACTGGATGCCACGCAGA Gene GeneID:281936|MYO1A:NM_174395:911_cdna Constitutive 0 NULL GeneID:281936 5 GENE MYO1A MGC127048 myosin IA EMBV3_41195 TTTGTCTGGCTATTGATTGTGAAAACTGATAAACATCTTTTACTATTGTGATTAAGTAAC Gene BVT0102_288456 + 0 NULL GK000004.2:43641517-43684550 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048834 TCONS_00088838 TCONS_00220464 3 XLOC_028965 XLOC_053624 XLOC_133781 NonCoding TCONS_00048834 XLOC_028965 NonCoding NonCoding - 13:49265081-49265251 - TSS36010 170 0.947058823529412 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00150596061193015 0 0 0 0 0 0 0 0 0 noncoding CATGTTACCATTATGGCTTGCAACTGTAATTATCTTTTATTTTTTGTCTGGCTATTGATTGTGAAAACTGATAAACATCCTTTACTATTGTGATTATGTAATTATTACTCACTTAATACCATTGTATCATGATTGGTCAACAGAAGAATAATAAAATTCTATATCACCAA TCONS_00042891 . 5' 284364 TCONS_00042891 . 5' 284364 EMBV3_03813 TACTGTGTCCAGTTTGGGGTGCTCTTGGGAAACCCTGCCCCCTGATGCTGTTACCCCTCT Gene BVV0102_430213 + 0 NULL GK000013.2:61218036-61234713 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00456 TCTCTGTATCACCTTTTCTCGCCGTGTGTCTCTGTCTGTGTGACCTCTGCTTTTTCTGTA Gene GeneID:790333|LOC790333:XR_084037:232_cdna Constitutive 0 NULL GeneID:790333 23 PSEUDO LOC790333 NULL similar to Metabotropic glutamate receptor 4 precursor (mGluR4) EMBV3_36320 TATGCGGCAGCACGATACCAGGAATGGCAGGGATTTGAAGCTGGATGGAGGGAGACAATC Variant GeneID:100138286|CABLES1:XM_002697726:55_cdna 570^647 1 EMBV3_41862 GeneID:100138286 24 GENE CABLES1 NULL Cdk5 and Abl enzyme substrate 1 EMBV3_25827 TACGAGTTGTACTGGGAGACCTGACTGGAGTATCTTCAAGTACAAATCCCTTCAGGCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35601 AGTGACTGTCTCAGAGGGGGCTCTCATGACCCTGAACTGCACTTACCAGACTGCTGATTT Gene GeneID:786717|LOC786717:XM_002690568:224_cdna Constitutive 0 NULL GeneID:786717 10 GENE LOC786717 NULL similar to LOC784904 protein EMBV3_21556 ACTCTTGAAAGAACAATGGGAATCCAGTAATAATGTCCCCGGAGTGGACTGGAGGTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33235 AGACAAAAGCTGATGCAGGGAGGGGGTACACTGTGGCCATGCGGCACCCGTTCATTTTAA Gene GeneID:508586|SCO1:NM_001080243:490_cdna Constitutive 0 NULL GeneID:508586 19 GENE SCO1 MGC143363 SCO cytochrome oxidase deficient homolog 1 (yeast) EMBV3_11145 CATCAAGCTGTTCCAGTCCCTTCTCTAGCTCAACATCTGGCTGGATATGGATGGCTTCCC Gene BVT0101_003718 + 0 NULL GK000021.2:31537228-31649522 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24014 CCAAAGGCAATCAGTCTAGTGGAGAAACCAACATGGAAATGAAAGAAGAGTTCCAAGCAG Gene BVV0101_003618 + 0 NULL GK000006.2:38992113-39537414 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05109 TGTCCTAGCAGACCTGGCACAGAGAAGAGGGAACATTCAGGAAATCCAGTCTCGCCAAGA Gene GeneID:527467|GFM2:NM_001102109:127_cdna Constitutive 1 NULL GeneID:527467 20 GENE GFM2 MGC140264 G elongation factor, mitochondrial 2 EMBV3_38183 TTTTGGAGATAGTGCTAGTAAACTTGCTGGCGAACTGCTGCAACTAAACCCGGGAGCAGG Gene BVT0102_100880 + 0 NULL GK000005.2:23394922-23426160 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30602 TGCCGCCTGCACCAAGCCTATTACTGGTCTCAGAGGTGCCAAGTTTATCTGCTTTCAAGA Gene GeneID:615499|FHL5:NM_001076379:11_cdna Constitutive 0 NULL GeneID:615499 9 GENE FHL5 MGC134130 four and a half LIM domains 5 EMBV3_39528 GGAGAACCTGCACTTCACCATCGAGGGCAAGGACACGCACTACTTCATCAAGACCAGCAC Gene GeneID:511615|ODZ1:XM_002698649:93_cdna Constitutive 0 NULL GeneID:511615 27 GENE ODZ1 ODZ1 odz, odd Oz/ten-m homolog 1(Drosophila) EMBV3_03203 GTTTTTGCAAATCCTGCAAGTGCTGAATTGGTTAACATTTTACATCTCCGCAGTTCGTAT Gene GeneID:540919|LOC540919:XM_002693474:89_cdna Constitutive 2 NULL GeneID:540919 15 GENE LOC540919 NULL similar to EMSY protein EMBV3_11630 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11626 GAGTCGAGTCAGCGTCACCGTCGAACCTAAGTGGATGTGTGGGGCGCGCAGGCCGGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04931 ACCAAAATAGGCAACACAATGGACACTTTTTGTCACATGAACCATTGTCCTTCTTCCATT Gene GeneID:537280|SLC19A3:NM_001102198:142_cdna Constitutive 2 NULL GeneID:537280 2 GENE SLC19A3 MGC165775 solute carrier family 19, member 3 EMBV3_12157 CGACTTCTTCAGCGCCCTAGTGTGTGACATGCTGCGCTTCTATGCCGAGCAGGGTGATGT Gene GeneID:507528|WDR24:NM_001045973:87_cdna Constitutive 0 NULL GeneID:507528 25 GENE WDR24 MGC137202 WD repeat domain 24 EMBV3_14147 TGGCCCAAAAGGCCAGCTTCCCAGTCTCTCCAGCTTTGCAAAATTGAGTGGTCAGTTGTA Gene BVT0102_307511 + 0 NULL GK000008.2:24778057-24830046 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00824 CGACTGATCACAGATCCCCATAACAAAGATTATACTGACAAGGTCTGGGGACTTCCCTGG Gene GeneID:618028|KIRREL3:NM_001078085:32_cdna Constitutive 0 NULL GeneID:618028 29 GENE KIRREL3 MGC152073 kin of IRRE like 3 (Drosophila) EMBV3_19639 GATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG Gene GeneID:100337114|LOC100337114:XM_002696244:35_cdna Constitutive 0 NULL GeneID:100337114 20 GENE LOC100337114 NULL RAN binding protein 17-like EMBV3_07619 TCACTGAAAAGGGGCCTATGCCTGTGGCTACCTTGATGTGGAATGATTCACTGTGTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27449 GAAAGGGACAAAGCAGAGAGAGCCAAGAAGGTCCGGCTGCCAGATGGGACCTCACTGACC Variant GeneID:506676|UBXN1:NM_001037588:52_cdna 630^746 1 EMBV3_43474 GeneID:506676 29 GENE UBXN1 MGC134136 SAKS1 UBX domain protein 1 EMBV3_06815 ACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTG Gene BVV0102_114163 + 0 NULL GK000008.2:13427349-13692253 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224478 TCONS_00224480 TCONS_00224482 TCONS_00224479 TCONS_00224477 TCONS_00224475 TCONS_00224481 1 XLOC_137538 NonCoding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_13615 AAGTCAGATCTTGTGATCCACCTCTCACGGCATTGTGGGGCAAAGAGATGCCCATAACCA Gene GeneID:786381|KRT2:XM_002687247:81_cdna Constitutive 0 NULL GeneID:786381 5 GENE KRT2 NULL keratin 2 EMBV3_25494 TGGTGTGCTGCCTAACATCCAGGCGGTGCTGCTGCCAAAGAAAACCGAGAGTCACCATAA Gene GeneID:506900|LOC506900:XM_002697519:242_cdna Constitutive 0 NULL GeneID:506900 23 GENE LOC506900 NULL histone H2A EMBV3_03422 GGAGCACGGCCTGCCGGAAGAGTGCTGTGGCTGGAAGAACTCCTCCCAGCTTCTAAAGCA Variant GeneID:100336823|LOC100336823:XM_002699391:394_cdna 167^257 1 EMBV3_13507 GeneID:100336823 29 GENE LOC100336823 NULL cystatin E/M-like EMBV3_26830 GACCCCAGTCATCTCTGATAATCTCCCCATCTCAGGGTTCCTAACCTTAATCACACCTGC Gene BVT0101_024411 - 1 EMBV3_17097 GK000010.2:104098219-104124759 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015574 1 XLOC_008513 NonCoding TCONS_00015574 XLOC_008513 NonCoding NonCoding B2M 10:104111321-104132845 o TSS10967 3881 2 TCONS_00015574_6 114 0.358412780211286 2 0.819774195047159 0 0 8.25887550367524e-33 4.2793938041519e-06 2.3598687067045e-17 1.13692029859827e-71 0 0 0 4.79162320161437e-05 0.000149206534607933 1.56362656583632e-42 9.11541941851618e-14 9.3774145656669e-05 1.52097921089485e-48 0.000738471126716198 9.0379866124395e-05 0.000334943234058688 0 1.46436716928335e-33 8.53653930796202e-82 7.44705998300865e-05 0.000106133621965993 0.000283520498730929 7.63927956124723e-77 0 0 0.000137056554834948 0.000182102221894545 0.000333958204830093 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 4e-102 378 90.37 0.0657047152795671 0 noncoding 0 0 0 0 -0.0697443627028062 0.670335117483036 0.0533047877543594 0.438643959977479 GCTTTCACACTGAAATTATATTTGTTTTATTTTTCAGACTGCTTGAAAACAAGTTGGAGGAGACTGTTAATGATAGGCACAGTGATAGTTTATTACATTTTTCAGCCTCTTTTTTTTTTCATGTTAAATAGCTTGGAGTTTTAAGTTCAACTTTTCTGCTTACTTTCATATAGATGAATTAACATAAAACTGAATGGCTGACACAACACCAGGACCATTAAATGGCTCATAGACCAGAACTTAACTCTATTAAAAGTTGCTTCTTTGTACAGTTTGATCATGAACTTCAAGTGTTCTAAGTAGAATGTGGATAGGACTACTGCTGCTAAGTCACTTCAGTCGCGACCCCATAGATGGCAGCCCACCAGGCTCCGTCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGGCTCTTAGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGTGGTGCCATTGCCTTCTCTGGTGGATAGGACTACGTTTGCTTAACCCTGATTTGATGGTGATGATTGTTCCAGGATGTCTTTTGGTTTCATATCCAACTCTTCTGTGCCTAGAATATACCACCTCCTGTCCTCGGTCCACTTCCCCAACACTGGGCTTTCCTGGTAGCTCAGGTGGCAATGAATCCACCTGCAATTCAGGAGACCAGGGTTCAATCCCCATAGTATCCAGGATGAATTCAAATAGTCACCTTTCAGAAATGGTGCTGAATGTATAGTCACCAGCCTCAGTGTCTACACTGTGTACTCCACCTGATTTTCTCTGTTCAAAAACTGAGGTTTTCCTTCCTGGAGAGGCAAGATGAAAGTCAATATCCTTTCCTGCTTTACCTGAAATGTGGTAATTGCTCTCCACTGAGGTCAATGTCTCTCTAAATTAGGGCTGAGGCTGGCTCTTGTCATCCATCCTATTGAGCTGGAAGAGGTGGACTCAACCAATTTGGCTGAGAATCTTCAGATAGTGGTATCAGTCATCCTCAGATCTGGAAGGATGGTCTGAGACAGGTGAGAACCAGGATGGGCTGTGGTCACTTTCTGAACCCTTGTGAGAGTCTGCCTCCTCACATTTCATTTTGAAAATTTTTAATCTTACAAAAAGTAGAAAGAATGATAAATTTAACTTCTGTGTATCCTTCACTTAGTATTTGATAACATTTTGTCTATCAGTATTCTTTAAATAAACTTCTCTGCTGTATCAGGCGGTATCTGTCTCCAGTGATCAGGGACTTCAGCTAAGAGACTATAAACAGAAAATTCGCAGAAGGAAAACAAATAATATGTAAACATGTGAAATACGTTAAACACTTCCTCTTGAGAATATAAATTCTTTGGACCAGCCCAGCACCCAGCACCTAGCAAGGCGACAGTAGAGGCGGGCAGCACCTGACTGACTGCTGTGAACACCGAGGCCTGATGGACAGGCTGGGGCCGGACCAAGAAGAAAGAAGCAAAAGCTTTGGGCACCGTTGTCCTGGGAACTAGAGGGCTCCCGCTCTTACTCTCGTTCCCTGTTCAGCATGGCAACCACTGGTAGAACAGGAATGGTTTGGCCCACTGGGTGCATGGTGGAGGAGTTAAATAGGCCAGAAATTGCAGGGCCCAGACTCCTGACCAAGCCAGGCTACAGCAAAGCTCCTCCACGCTCATCTGTAGAGCTGATGAGAGCTCTCCCTCACACAGGAGAGTATCCTGAGTGTGCTGTGTGGCCAGATTTGGTTAACCAACAGGAAAAGACAACATGGAAAAGGCAAATATTTATACTGACCTGGATATCTGGCAACAAAGGCCCAAAACTGATTCTGGAGCCGTATTTTTTTTTTTTTTTTTTCCCTTGCTGCTGTTATAAAGTACAACAAACCTGATAGCTTAAACCAACACGATCTATCATCCTCCAGTTCTGTAGGTCAGAAGTTCAACACACCTCTCCTGGGCTTAAAATTAAGCAGCGTTGCTTTTCTTGCTGGAGACTCTGGGACATTCCATGAGCTTACCTTTGCCAGCTTCTAGAAGTTGCCTGCATTCTTTGACGCATGGCCTCTTCTTCACCTGCAAAGCCAGCATGCTGCAGCTCTCTGATTACGCTTCTGTAGTCACATCTCCCTCTGACCACAGTCAGGGAAAATTTTCTGCTTTTAATGACCTCTGTGTTTATACTAAAGACAGTGAAAGTAAAAGTGAATTCACTCAGTCGTGTCTGACTCTTTGTGACCGCATGGACTGTAGCCTGCTAGGCTGCTCCGTCCATGGGATTCTCCGGGCAAGAATACTGAAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCGACACAGGGTTTGAACCTGGGTCTCCTGAGCTGCAGGCAGACACTTTACCTTTACACTAGGCTGACCCCAGTCATCTCTGATAATCTCCCCATCTCAGGGTTCCTAACCTTAATCACACCTGCAAAGTCCCTTATGCTATGTAAGGAAACATATTGAGAGGTTCCAGGAATTAGGCTATAAACATCTTTTGGGGGGATGAAGGAGACATTATTCTCCCTACCACAAGGTGTGTTATGGAGAAAAGTCTAGCATTGTTAATGGTAAGTAGGCAGTTCTGTATATAATGACATGGAAAATATCTATGATATATTGTGAACTAGAAATAAACATGTTCAGTAAGTATTTATAGTATGTCCCAATTTTGTAGAATTTCCATTGTTCCCAATAAATGCTGAATGAATTCTCTCTAAGCCACCCCCACTGCCAAAGCCTGGCTTCTGGGGGCAGATGGTGGAGCCTACCTCACCCCTCAGCTCTCAGGGTATTGGGTGGCAGCCGGGGTGGTTTTGCTGTCGTTGGTCATTAGATTTTTGGCTAATTTGACAAATGATTAGTTGTCTTTTAGCAAACCCATTTGTGGCAAATTGACCTAACAATGATAGTAACAATGATGACAATAAATAATGAAATAAAAAATGATCACAGATTCACCAACCGTCTATTTACTGGCTCCCTCCTTTGCACCTAGACTGCTCCTACTCTGTGTTTGATGGCTCTTGTGTTTGATGTGTATACATCCCTCGCATTTTTGTCCTGTTAATTTTGTTTTAAATTTCTGATTCTTCACTGAACAATTCTTTCTTCACAGTCCTGTTTAAGGAGAAGTGTTTAGAAAAGTTCAAGAAACCAGAAAGTAGAGAGGAAAGAATCTGATGCAGGTATAGGAGGGGGTGGCCAGAAAGGGCCACACAGTCTGATTGGTCAGAGGCAGGTGTCAGTCAAGCAAGCTGGAAAGTGGGAAGGTGGGGTTTAGAGGAATTTGCCGAGAGGGAAAAAGGACATTTGCAGGAGATTCTTAATTTTTGAGAGTGCTGCATGGAATCCCAGGCAAGATAGAAAATCCAAGTTGGGATTCTACAGTTTGGGGTAGGTTCTGAGATGCAGACCCAAGGGCCTATGAAGGGAAAACACCCAAGACAGGAGGCTGTGCCAGTAGCTTAGTTACTGGTGCAGTGGTCCCCAGGCATGGTGCCTAAGCCTTGGCTCCTGGGGTTGTCCCGTGCCCCACAGTGACAGGGAGCCTTGGCTTCAGCATTTACCTAACCTCACTCCACATCCAAGCTGAGGACTGAGGCTAACTCGAACTCCATTTATGCTTCTAGTGGACACTGAGTTCTGAACACCTAATAAGAGCAGGCTCTGTAGTTATAACTTAAAAACTCATCACCTCCTAAATTGTATACAATATTTCAATACATCTATGAGGGGATGGGCTTCCTAGCTGGCACTAGTGGTAAAGCACC TCONS_00015578 s 5' 4677 TCONS_00015575 s 5' 13435 EMBV3_13823 GACTTGTTTCTTAGCACACCTAAGGTTGACCGACACCAGGCCCACCCTGCTTTGCCTCAA Gene GeneID:100295789|LOC100295789:XM_002693981:228_cdna Constitutive 0 NULL GeneID:100295789 16 GENE LOC100295789 NULL similar to histone cluster 1, H2bd EMBV3_29876 AGCCTACTCCACAGACTATTCCGGCCATTGATCCTGCACTCTTCAGTACAGTTTCCCAGG Gene GeneID:506430|VTA1:NM_001038045:2_cdna UTR3_Alt 2 NULL GeneID:506430 9 GENE VTA1 MGC133887 Vps20-associated 1 homolog (S. cerevisiae) EMBV3_43398 TTGGATGATGCAGACGACCCGAGCACCAGCATCGGAGCCTATCACTACATGTTGGAGTCA Gene GeneID:535033|LIX1:NM_001078003:23_cdna UTR3_Alt 2 NULL GeneID:535033 7 GENE LIX1 MGC142689 Lix1 homolog (chicken) EMBV3_04440 GGACATGGCCCGGCATCGCTCAAAGTGAGCCTCATTCATTATCTGTCAATTGATTGGAGG Gene BVT0102_203355 - 0 NULL GK000007.2:68656823-69148148 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18250 TTCTCCAATTTAGATCCGGGACAGGTTGATTCTCCATGTTGCAGACCCCCAGACATCCAG Gene BVV0102_403651 + 0 NULL GK000014.2:81571941-82816558 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218885 TCONS_00242574 TCONS_00037838 TCONS_00057019 TCONS_00041593 TCONS_00235856 TCONS_00057018 TCONS_00118520 TCONS_00058128 TCONS_00138407 TCONS_00118521 TCONS_00233184 TCONS_00048507 TCONS_00118479 TCONS_00033090 TCONS_00109063 14 XLOC_132204 XLOC_149237 XLOC_021667 XLOC_034820 XLOC_025399 XLOC_144309 XLOC_072652 XLOC_035925 XLOC_084615 XLOC_142666 XLOC_028639 XLOC_072637 XLOC_019324 XLOC_064968 Coding TCONS_00218885 XLOC_132204 NonCoding NonCoding - 7:10128477-10129746 - TSS162883 1269 2 TCONS_00218885_2 36 0.940898345153664 1 0 3.5738614482064e-06 0 0 0 3.8906132586167e-07 1.15883759786575e-06 8.7732549526146e-07 0 3.52330952855172e-06 0.00013164185747269 6.82175791047059e-05 0.000239342326857858 3.13364371722407e-05 0.000118263960939489 4.1416580641957e-05 0.0402028128599499 0.0132570802079862 0.0273037195919152 2.11906793639353e-06 0 3.98703147195361e-07 0.00784279868617422 0.0106058797808052 0.0193842245070306 0 0 0 0.000713639753476594 0.000280669329084988 0.00164464512407208 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 1009 89.88 0.574468085106383 NM_002736.2 PRKAR2B Homo sapiens protein kinase, cAMP-dependent, regulatory, type II, beta (PRKAR2B), mRNA. 5e-06 57.2 84.31 0.0394011032308905 0 noncoding 0 0 0 0 0.0770435826779018 0.678435328218526 0.014242223892218 0.756893739652363 AGCTGCTCCAGTGGCGGTAAAATCCAGTCGAGAGTGTTCCAAGGTCTGTATTTGATTATGAAGTTTCCCTAAGTCAGGCCAATATCAGAACTGTTCCAAACACCTGAGATATGATTTTTAATCTTTTCCCATTCATAATCTGTCTCGTTTACCTTCAAAGATGTCACGCATATCCACCTGTAATCAGCGTGGCACGTCAAAACCATCTTCACCTTTAAAGCCTGTAACTCAATCCCAATATGCATAATTGCTTCTTCTAAGGCGTCTACTCTTCATCTCTAATTTCCTATCTATAGCTTCCTGTGTTGCTAGAGTTAAAGAAACAATTTTAGACATGGTATCAACATATTGGGCAGTATGCACTTGTTGAGTCAATGATACTGCTGCCGCAGTAACAGAAGTAATTGTTGCTATCAAAGCTGATATTCCTAGGATAAGCAAGACCACAAACCGTCGCGATCGCATTAAATCCTGCAGTTGTTGTAACACAGTAAGACCATAGCTATCATATAGGCACCATAAGATAGGATGGGCATTGTAACACCACAAAGGAGCAAACATTACATTGAGGGTTTAAACAAGATGAAAGCATACATTGTTCACAAGTCACTACGTTAGGTCCACCTGAATAATTCATGCCTACATTAAGTTTGTTGGAGTCATTAGTAAAAAGGAAAACATAAGGCAAGGGTGGATAAGCTAAAACAGAATAAGTAGAATTATTTTCTGGTTGGAGTTCACGCTGCAGCTGCCCTGTCAGTCTCGCCGGGATCTCGATGTTTATCTTGTCTCCCCTGCCGGTGGGCTCCTCTTTTGTGATCGAAGCAATGGGGGAACTGGATGTCTGGGGGTCTGCAACATGGAGAATCAACCTGTCCCGGATCTAAATTGGAGAATTTGCATCCTGTGGAAAAATACAAGCACATCCTCGACCGCTAGTTAATAATGGGTCAGGACCCTTCCATTGTCCTGAGAGCAGGTCCTTCCATTTGACCAACGGCTTTGTATTTGTTGTTCCGGGCACCAATGGCGAAGCATTGCAGTAGTTCCAGCCTAAACGGCATTTAAAATATTTATTACAAAAAGAGCAAGTTGCAAGATTTGATGGGGAGAGCTATACTTAAACTCCCCTTCTTTTAATTTTTGAATTTGAAGCTTTAATGTTTGATGTGCTCTTTCCACAATGGCTTGTCCCCGGGGATTATAAGGGATGCCTGTATTGTGTTTAATTTGAAACTGTAAACAAAATTCCTGAAAAGACTTAGAAAN TCONS_00211744 . 5' 10947 TCONS_00211744 . 5' 10947 EMBV3_31923 GCCCGGTGTAGCACAGAAGACGCCCACGCGCCTGAGCCACCAATCCACCCAGACAATAAA Gene GeneID:516411|SMG6:XM_002695687:231_cdna Constitutive 2 NULL GeneID:516411 19 GENE SMG6 NULL Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) EMBV3_35432 GAACCAAGGTGAAGTCCCCAGGTGCATCGGGTCGCAATAAAAAGCCTGGAAAAAAGGGCT Gene GeneID:517081|USP26:XM_002699553:68_cdna Constitutive 0 NULL GeneID:517081 X GENE USP26 NULL ubiquitin specific peptidase 26 EMBV3_23666 GCTGAGCTCCACCTATGAGAAGATCGGAGTGAAGGTCTTCTTGGTGAACATTCATGCCCA Gene GeneID:508958|SLC26A9:XM_002693867:127_cdna Constitutive 0 NULL GeneID:508958 16 GENE SLC26A9 NULL solute carrier family 26, member 9 EMBV3_24448 ACCCGTGCACAGCCAATAACCCAGAGAGCTGTTCCATTTCACTTTCACCCCAGGACTTTA Gene GeneID:513776|FBXO32:NM_001046155:32_cdna Constitutive 0 NULL GeneID:513776 14 GENE FBXO32 MGC137646 F-box protein 32 EMBV3_13222 GGGACCATGGCAGAAATCATGCTGTCCCCGTCCTGACTAGGATTCTCCTTTGTTTTGATG Gene BVV0102_214586 + 0 NULL GK000019.2:22819810-22824634 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092737 TCONS_00092722 1 XLOC_056961 Coding TCONS_00092722 XLOC_056961 Coding Coding VPS53 19:22694624-22821697 = TSS69708 5289 1 TCONS_00092722_3 832 0.0257137455095481 22 0.958551057668094 3.39759602115367e-08 4.14669074380935e-09 0.000299715401680882 0.000439592806409785 8.16983086266405e-05 3.24822439327708e-05 1.60971833720533e-05 0.00133322083307497 4.44254835816146e-06 6.14092279089478e-06 2.33535484835502e-05 0.000126811460097541 5.9986384678563e-33 2.41400131825823e-09 2.0600667756328e-05 0.00214410609918265 4.25864494947679e-05 0.00021552974344461 8.96708899066478e-05 7.9925740572256e-10 9.64242626010914e-05 0.000774828094131684 0.000168622637927494 0.000563328232247641 0.000284100374965399 0.000255595349130589 0.000284061939702074 0.000135849689464031 3.28568357056467e-05 1.27436793187726e-05 NM_001193168.1 VPS53 Bos taurus vacuolar protein sorting 53 homolog (S. cerevisiae) (VPS53), mRNA. 0.0 5988 100.00 0.627528833427869 NM_001128159.2 VPS53 Homo sapiens vacuolar protein sorting 53 homolog (S. cerevisiae) (VPS53), transcript variant 1, mRNA. 0.0 3622 88.70 0.53280393269049 TCONS_00092722_3 sp|Q8CCB4|VPS53_MOUSE VPS53_MOUSE Vacuolar protein sorting-associated protein 53 homolog; 0.0 1641 96.45 0.981971153846154 2 coding 0 0 0 0 0.098007462530066 0.711769222975998 0.0139341381892157 0.82555652774437 GGATTCCGGAAGTGCTCGGCTTCCCGGAAGTGCCCGATTGGCTGACAGAGCCCAGACTCGCCGGACCGCTGCAGCTGGAGCGTTTCTAGTCTCCGGCGTGAGTGGCCGCAGGAGGTGTGGCTCCGGGTCCGGGTGGCCGTCGGGAGGGAGCTGGCGGCAGGATGATGGAGGAGGAGGAACTGGAGTTCGTAGAAGAGCTGGAAGCCGTGCTGCAGCTCACGCCCGACGTGCAGCTCGCCATCGAGCAGGTATTTCCAAGCCAGGATCCTCTAGATAGAGCAGATTTCAATGCTGTGGAGTATATCAACACCCTGTTCCCAACAGAGCAATCTCTGGCAAACATTGATGAAGTCGTGAACAAGATTAGACTGAAAATAAGGAGACTGGATGACAACATTCGAACTGTCGTAAGAGGTCAAACAAATGTGGGACAGGATGGCAGGCAAGCACTTGAAGAGGCCCAGAAAGCCATACAGCAGCTTTTTGGAAAAATCAAAGATATCAAAGACAAAGCAGAAAAATCAGAGCAAATGGTGAAGGAAATCACCCGTGACATTAAGCAGTTAGATCACGCCAAACGCCACCTGACCACCTCGATCACAACGCTGAACCACCTGCACATGCTGGCGGGTGGCGTGGATTCCCTCGAAGCCATGACCAGGCGAAGGCAGTACGGAGAAGTTGCTAATCTTCTTCAGGGCGTAATGAATGTTCTGGAGCACTTCCACAAATATATGGGCATTCCACAGATCCGGCAGCTTTCTGAAAGAGTGAAGGCGGCCCAGACTGAGTTAGGACAGCAAATCCTGGCCGATTTTGAAGAAGCTTTTCCTTCCCAGGGCACCAAGAGGCCAGGAGGACCCAGCAACGTTCTACGAGATGCGTGTCAGGTTGCTAACATCTTGGACCCCAGAATCAAACAGGAAATCATCAAAAAGTTTATTAAACAACATCTGTCAGAGTACCTAGTACTTTTTCAAGAAAACCAAGATGTTGCCTGGCTGGACAAAATCGACCGTCGCTATGCCTGGATCAAACGCCAGCTCGTGGACTATGAGGAGAAATATGGCCGGATGTTCCCACGTGAGTGGTACATGGCGGAGAGAATTGCCGTAGAATTTTGCCACATAACAAGGACAGAACTTGCCAAGATCATGCGTACAAGAGCAAAGGAAATTGAAGTGAAATTGCTTCTCTTTGCTATTCAGAGAACGACTAACTTTGAGGGATTTCTTGCAAAACGCTTTTCCGGGTGCACCCTGACAGATGGAACGCTGAAAAAACTTGAATCTCCACCCGCATCCACCAATCCCTTCCTGGAAGATGAGCCAGCAGCAGAAATGGAGGAACTGGCGATGGAGAAAGGAGATTTAGAGCAACCTAAGAAGCCTAAAGCCCCAGACAATCCATTTCACGGCATTGTTTCCAAGTGTTTTGAGCCGCATCTCTACGTGTACATTGAGTCCCAGGACAAAAACCTTGGAGAGCTGATAGATCGGTTTGTGGCCGATTTCAAGGCCCAGGGCCCACCTAAGCCCAACACGGACGAGGGGGGTGCCGTGCTCCCCAGCTGCGCCGACCTCTTCGTCTACTACAAGAAGTGCATGGTGCAGTGCTCGCAGCTCAGTACTGGGGAGCCCATGATCGCCCTGACCACTATTTTCCAGAAGTACCTCCGCGAGTATGCCTGGAAAATCCTCTCTGGCAACCTGCCCAAAACCACAAGCAGCAGTGGCGGGCTGACCATCAGCAGCCTGCTCAAGGAAAAGGAGGGCTCCGAGGCGGCCAAGTTCACCCTGGAGGAGCTCTGCCTCATCTGCAGCATCCTGAGCACTGCAGAGTACTGCCTGGCCACCACCCAGCAGCTGGAAGAGAAACTCAAGGAGAAGGTCGACGTGAGTCTGACTGAACGAATCAATCTGACTGGAGAAATGGACACGTTCAGCACTGTCATCTCCAGCAGCATTCAGCTGTTGGTTCAGGACCTGGATGCTGCCTGTGACCCCGCCCTTACAGCCATGAGCAAGATGCAGTGGCAGAACGTGGAGCACGTTGGTGACCAGAGCCCCTACGTCACGTCGGTCATCCTTCACATTAAACAGAACGTCCCCATCATCCGTGACAACCTGGCCTCCACGCGGAAATACTTCACGCAGTTCTGCATTAAATTTGCAAACTCCTTCATTCCCAAGTTCATCACCCACCTCTTCAAGTGCAAGCCAATCAGCATGGTGGGGGCAGAACAGCTACTGCTGGACACACACTCCCTGAAGATGGTCCTGCTTGATCTGCCTTCCATCGGCTCTCAGGTGGTGAGGAAAGCCCCGGCCAGTTATACCAAGATCGTGGTGAAAGGCATGACCCGCGCGGAGATGATCCTCAAGGTTGTGATGGCCCCTCACGAGCCGTTGGTGGTATTTGTGGACAATTACATCAAGCTCCTGACAGACTGCAACACAGAAACCTTCCAGAAGATTCTGGACATGAAGGGGCTGAAGCGGAGTGAGCAGAGCAGCATGCTGGAGCTCTTCCGCCAGAGGCTCCCCGCCCCGCCCTCAGGACCCGAAGGCTCCAGCTCCCTGTCCCTCCTGGCTCCAACTCCTGAACAGGAGTCCTCACGCATCCGCAAACTGGAGAAACTGATTAAAAAGAGACTGTAGGAGCACCCAGGGGTCACTTTCCCCTCTGGCCGGTGAGCCACCCGCAACCAGATCCCTGGACGCCCCTCACATCTCCTGTGCTCCCCAGATCCTCAGATCATCAGTCTTGAAACTTCCTGGGACGTTTGGGTCATTCCTGGGTCGCTCCCATGCCTTGTCTTAATTCCTGCCTAATGGGAGAAGCCAAGTAAGGACTGGAGGCAATCTCTGATTCCTGTAGCAGAGGCCACAGTGGGTGAAGAAGGTTCCCGGGCTTCACTGGCTGTTCCCCAGCTGCTCCCGACTGCTCCAGTCATCACTGACTCTGCAGCCTCACCCGCACAGTCCCGCCCTCTGTGACTGTGGCCCTGTTCCCTTCCCTGCTCTGTCCTAGCACTGTGGGCCAGAGAGCTGGGCTCTCACAGCTTCCCCCACCTGCAGCTGTTGGAGGTGCCCTCTGCAGCCAGACCCCTAAGAGATGTCCTCTAGGCTTGGCTCTAGGGCTCCAGTGATGAAATGGCAGATGATAGATATGGCAGGAGAGGTGTGGCCTTTAGCTGAGCCCTGTGAAGAAAGGATGGCTATGTAAGAAAAGCGCAAGGGGACTTGTGGTCCAGTGGTTAAGACTCTGAGCTTCCAGTGCAGGGAGTGTAGGTTCAATCCCTGGTCAGGGAACTGAGATCCCATGTGCCATGTGGCCAAATAAGTGGCCAAATAAGAAAATAAAATAGAAGGAAGTAAACCTTCCAGCCAAAAAAAAAAAAACGCAGGAAGAGTAGGGAGTAGTGCAGTGGGTCACCCAGGCAGCTCAGTCAATAGATTTCCCTCTGCCCAGACAGCCATGGTGTTGCTCTGGGAAAGTTATCCAGCCCATGCTAATTGAGGTTAATGTTCTCTTCTCACTCCTGAAAGAAGGGGTGACGGGCCCATCTCCAGGCAGCCGCTTTAGCCGTCTGTCATCGGCCCGGGAAGCTGGAAACGCCAGTGGACTCCCACACCTGGTTCTTGTCACTCTCGGTGTTTACAGATCCACACTTCTTTTTGTGGTTCATTCACAAGGAGTCACTTTCTGGACATCTCCATAATGGCATTGAGATGTCAAGGCACTGTTTCCCCTCCACCACCACCAGCCCCAGGTGGTCACAGCCAGAGAAGTTGCTTTCTTGATTTATTACACCGTCAGTAATCTCCAAGGAGCCAACAGATGTCAGTAGGAGTTACGTTAGGTGTCTTGGTGATGGGCGCTGAATGCCGTATGTAGTCCTGTACAGACAGAGCCTATTTCTCAGCTGGGGGTCTGCATCAGCATCACCTGAGGCCCTTTTTATTTTCACAAGTACAAATGCCTGGAGGTTGTGAATAGTCAGTCTGGAAGTCTGGAGTAGTGCCCAGCATACAGTTGAAAAGTTCCATTATGATTATAATATTTACTCCTTGTGAAGAACCGTTATAATAAGAACTTGCTTTATTGAAGATTTCCTATTGCACATTTTCACAAATGGGTATTTTTTTCTGACTGTAAGCAAGTGTAATTACTGTACAGTTGAGCTGGTACCCAAACAGTAAAGATGTTTTTTTGCTCATAGCCAGCATCTTGAATTTTGAGTTTGTGTCGATGGAGGGACCATGGCAGAAATCATGCTGTCCCCGTCCTGACTAGGATTCTCCTTTGTTTTGATGACTAAACCCTAAACGGAAGATTTATTTATTATTGTCGCTTTGAAATAATATATATAAAGGAGCCCTCATTGATCAAAACAGTAGCTAACAACTCTGCTATTCAGCTAAATTAGATATTGTACTGGTTCCTTCCCTCTACTTTCTCTAGATTTCAAAAAAAGAAAAAAGAAAACTTTGAAGTTACCTTATGTGGTTAAAATAAATATTGGTAATTTATAATTGATAAAGAGTTCTCTGCTGTCTTTACTGTGGCCAGACTTCTAGATTGGTGGTTAGAGGTGCTCAGGCTGGAGAAAGTTCTGTTTGGATCATAATAGGGAAATAGGAACCACCACGGACAGGGTGTCTTGACCTCCAAACTCAGTTCTGGGAATTGAAGCAACTATCACCACACCTCCCTCTCTTGAAGAACAAAGACCCAGTACCCAGGGCTTTGCCCACCCCACCAGAAAAGTGTGCCGACTTTCTCACGCCTCAGGTGGCTCCTCGGTACAGACAGAACAAGACCAAAAGTCGACTTCTGAGGACCAGTGTGACAGTGACAGGCAGGCAGGGTGAGTGAGCAGGAGAAATGGGGGATGTGATAGCAGCCCACCCTGAATTGCTCTTGGACGAGGAACCCTCGTCCCCTGTTTATGGAACGCCAGGGAAAATGCCAGAAGTTCACAGCTGGAAATGAAATTCCTCTTGCTAGCAAGAAAAATCTCCAAAATAACCAGCTTGCTTGAGGCTGAAAGCAAGTGTTTCACACTTCTCGTCCCCTCCAAGTCAGATCGCTAAAAATAAAACGATTAGGACTGCACTGGGCCATTTAAACAACAGTCCTGGGAACACGGACACACCAGATGCTGGCATGCAGAAAGAGTACTGGGATGTTTTATACAGTAAAGATAATTTTCCAGTCTCAAATTCTAATATGTATCAAAATAGATAAGCTGCCCCCTTCTCCCCGCCCGTCCCCCCGCTCCCC EMBV3_25075 TCCCCACCTCCGTGCAGATTCCTCCTGCTTCCACTCATACCCTTTTGTCTGGAATGGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18605 AAGGCGGAGACCGTCTTGCACTTCTTCACCCTGGTCAGCTTCACACCCATCATGGCCCTG Gene GeneID:507247|LOC507247:XM_002699436:129_cdna Constitutive 0 NULL GeneID:507247 29 GENE LOC507247 NULL similar to G protein-coupled receptor TGR7 EMBV3_16988 GGGCCATGTACCTGTGTTGCTGGAGAATTTGCCTAGTATGTCTTGCTCCGGAACTTGTTG Gene BVT0102_007210 + 1 EMBV3_24127 GK000007.2:57563237-57828306 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213731 TCONS_00141681 TCONS_00252489 TCONS_00148196 4 XLOC_130524 XLOC_086109 XLOC_155430 XLOC_090079 NonCoding TCONS_00252489 XLOC_155430 NonCoding NonCoding - X:89821747-89822938 - TSS189710 1191 1 TCONS_00252489_1 55 0.992443324937028 1 0 0 0 0 0 0 0 0 0 0 0.000556199082342439 0.000474752575823309 8.75659205462349e-05 0 0 0 0 1.54886554886193e-06 0 0 1.20762854572436e-06 0 2.07687296508648e-06 0 0 0 0 3.07469756662453e-07 0.000149199276093958 2.52716536566051e-05 5.88940917136822e-06 XM_003584621.2 LOC100849565 PREDICTED: Bos taurus butyrophilin subfamily 1 member A1-like (LOC100849565), transcript variant 1, mRNA. 1e-140 504 86.62 0.34928631402183 0 noncoding TGTTTGGAGTGGCCTTTCTGTATTCTGGCAGTTTGTGGTTCCTATTTATTGTGGAGGTTCCTCTCTGTGAGTGGGGTTGGACTGGTGGCTTGTCGAGGTTTCCTGGTTAGAGAAGCTTTTTGGTGTTCTGGTGGGTGGAACTGGATTTCTTCTCTCTGGAGTGTAATGAAATGTCCAGGAATGAGTTTTGAGATGTCAATGGGTTTGCCGTGACTTTTGGCAGTCTGTATATTGAAGCTCAGGGCTATGTTCCTGTGTTGCTGGAGAATTTGCCTGGTATGTCTTGCTATGGAACTTGTTGGCCCTTGGGTGATGCTTGGTTTCAGTGTAGGTATGGATGTTTTTGATGAGCTCCTATTGATTAGTGTTCCCCGCCCTCAGGAGTTCTCTGGTGTTCTCAGGATTTGGACTTAAGCATCCTTCCTCTGGTTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATTTGTCAGGAGCCACGTTAGGCATTACTGACAAAATGGAAGCACGGCCCCCAACCCCATCTCCTGAACCCACAGGCACAGACCCAGGATGAAGGAGTTAGCTCTTGTGATTCTTACTTATTCTTTCCTTTCTTTGGTTGAATTGGCTGGATAGAATGTTAAGGTGCTTGAGAGAACCATGAGAAAGCACAAAACCTTCTATAGTTGCACCTAGAAAAAAATCTATAAAGTAACCATTGACATTTGTTCAAGGATCTTTACAAAGAATGTCCCAGGATGAGCATGTAGACCACAGCTTGAGGCCATGGGAAGGATTGTTTTCTGAGACCTGTTTGTGAGGGAAATATTTATGGCAAAAGAAGTTTGCTGAGTTTAGGGTTTAGGAATAATTAAGAATAGCTAGAAGCCTTTTTAGGAGATAGTGATCTTAAGATGCTAGGGACAAACAGGATTTAGAAAGATAAGACATAAACTGAGGAATGCAGCATGGGTTACATTGTAATCACAAGTTAAGTGTAGGACACATAAGAGAAAGTAGATAATAGATAGTAAAGTCAATTCTGAGAGAATCGCTGAAGCAGGAACTCTGTTTGTAGGACAACAGTGATTTCTGGAGACAATAAATCTGGGTGGGGAAAACTGAAAATGTCAAACCTGTGACCTAATGCTTTTGTCCAGGTATAAAAGAGAACCTGAAGCTTGAAATAAACATGTAATTCCCCA TCONS_00247530 . 5' 9289 TCONS_00247530 . 5' 9289 EMBV3_17495 GGAGCACTCAGGCTCTGTAATTGTGGTGTGTGGGCTTAGTTTCTCTGGCAGCACGTGAAA Gene BVT0102_240239 - 0 NULL GK000006.2:73569221-73629777 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209407 1 XLOC_127918 NonCoding TCONS_00209407 XLOC_127918 NonCoding NonCoding - 6:73601836-73603702 - TSS156914 1866 1 TCONS_00209407_8 92 0.255091103965702 1 0 0.000452065572266239 5.38501320245194e-05 0.000371946243589791 0.000267015144802578 0.000396879732555467 8.24296377148017e-05 0.000253144442559666 0.000399386039307279 5.49687756059529e-05 5.51245188685496e-06 0 0 1.53766396234337e-06 0 3.41803589620035e-05 1.41541031287516e-05 5.33836552180469e-05 0 0.000718630459091257 0.00164594946782371 4.39252994948729e-05 0 0 0 0.000438135050452766 0.000725691725796634 0.000138157953954464 0 0 0 XM_005200466.1 LOC101909489 PREDICTED: Bos taurus EGF-like module-containing mucin-like hormone receptor-like 1-like (LOC101909489), mRNA. 1e-35 156 79.89 0.0927116827438371 0 noncoding 0 0 0 0 -0.670142391374814 0.0328666041890877 0.0203117133070165 0.706377126323618 AATTTCTGCTTACTCTGGATCAGAATTTTTTAACCTAGAGTCTGAAGACAGCCTTTGCAGGGTCCATAAATCTTCTATGAGTTCATGTACAATTGCATGTATGTCAGTTTGCTGGGAATAGCACCCATGTTTCTTTCTTTTTTTTTTTTTTCCATGTTTCTTTATTTGGCTGTGCTGGGCCTTCTTGCTGCTTGTGGGCTTTCTCTAGCTGGAGCACTCAGGCTCTGTAATTGTGGTGTGTGGGCTTAGTTTCTCTGGCAGCACGTGAAATCTTCTCAGACTAGGGAATGAACCATGTCATCTGCATTGGTTGTTGGATTCTTTGATCACCAGACCACCAGAGAAGTCCACATCCATGGTTCTGATCATAGTCTGAAAATAATTCATGACCTGAAAAAGGTTATGAAGCAGTGTTCTAGATGATAGCTTTTCATTTCTCAAAATATTTGATTAAACCAGTAGACTTTATGTTTTACTACTATATATTTATCACCACAACTGGAAGCAGAAGGGAGCCTTGGGTAGCTTTTGTAGCTCAAAAGATTGAGTCTTCTGGGGAATAAGGTGATGGAGTCTTTTGGGTCTTCTTGGGGTTGCTGCGGCAGAGTGTTTTGGTCTCCATTTTGCAGAAGCATAAATGTCATGCAGCCAATGGGGAAGGCAGTGCTGCTGCCCCCCTCCCCCCCGCCAAAAGAATGCTGCCTCAGGTTTCCATAGGAAATAGATTACTTTAAATGATTCCGTCCCCACCAGCCTCTTCCTTTTCTCATGCTCAGTGTCATTTATCATGAGTAACAGAAACTAGGCATTTGGTAAGCGCTATAATGCTTTGTCAAATTGCATCCACCCAGAATTTTTTTAATTTGTTTTATTGTCTCCGTGGATTAGTATTTTATGGAGTAAACTAACTTTTATGGCCCATCTAGATTTGCATGAATGAGCTTGTTTGGAAACCAGTTTTACAGATGATTGAGCTCTATCTCTAAAGCCTTTATGTTAAGCTAATAACTAGTGTCGTGGAGAGGTAATACCATGTAGTAGTTTTGGTTGTTTTTTGTTTTAGTTTGATTTTGGGGGTTTTTGTTTGTGTTTGTTTTTTTAGATAGAAGGAAAAGAAAAAAAAGCTAGGTTTATTGGTTAAAATGAAATATGGGGAATTCCCTGGTGGTTCAGTGGCTAAGACTTCATGCTCCCAATGCAGGGGGCCTGGCTTCCATCCCTGGTCAGGGAACTAGATCCTACATGCGGCAACTAAAGAGTTTGGATGCCTCAGCGAAGACGGAAGATCCTTCATGCCACAACTAAGACCTGGCAGAGCCAAATAAAACGAAAAATAAAGTTTCTGGAAATGACCCTTAAGACAAGCAGCAAATAAAGAAACATCTATTCAAGGATATATATGAAAATTCAGTAAGAAAGGTGAGAGTCTGTGATATTCAAACTACTTTTAGGCAGATTGTGTCTTGCCACAAATTCCAGTTCTGTCTTTAAATCCCTAAGTTGCATTCACTTTTTACCTGTTTCCTCCTTTGACTTGCACACAAGAATCTTAGAGCTTAATGAATGTAATGTTCAAATGTGGTGATCCCTCTCAGCAAATAAAATTCCTGGCATCATGCCTAATCATAGCAGGAAACCAAAAAATAACAGCTGCTACCATCATCACTTCCACCGCTATCCCAGGAGATTGCCAGCTTGTCTGTGCCGCTCTTCTGCTTGGTTTCTGGTATCAATACTTTAATCTGAATTTGTTTTTACTTGCTCCCTGGAGTAGATATGTGTGTCTATGTTCATATGCATGTGTGCCTGTCTTTATTATGTGTTTGTGTATAAATTGAAAGTTTCCTAAATCCTCTAAAGAAGCAG TCONS_00203595 . 3' 55 TCONS_00203595 . 3' 1920 EMBV3_32993 GGCTCAATCACAAAGGAGTGAGACAGAAGCGCCTAAATGCCTGGCTGGGAATCAAGAATG Gene GeneID:286865|PIK3R3:NM_174796:29_cdna Constitutive 0 NULL GeneID:286865 3 GENE PIK3R3 NULL phosphoinositide-3-kinase, regulatory subunit 3 (gamma) EMBV3_18439 GGTCAAATGTAACCAGGAAAGTAAAAGGCTTCCCATCCGCTGCACGAAGGAGGGAGTGTG Gene GeneID:538320|PAPPA2:XM_002694100:383_cdna Constitutive 0 NULL GeneID:538320 16 GENE PAPPA2 NULL pappalysin 2 EMBV3_36067 CGACGGGCTGAAGCTGAACAGCGTGAATCAGTATGTGTGCGACCCCGTGATGGGAGACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10552 AAAGACGGGCCCCACACTGGCCATAAAGAGGTATTTCCAGGGCATCCATGTCTACCTGAA Gene GeneID:100298530|LOC100298530:XM_002689520:147_cdna Constitutive 0 NULL GeneID:100298530 8 GENE LOC100298530 NULL similar to interferon, omega 1 EMBV3_04401 GAACTGAGCGAAGAACCGGAGATAATTTGGGCACAGTTTCCTTCTTCCAGGAGTCTGGGA Gene BVV0102_400216 - 1 EMBV3_29379 GK000029.2:33577320-33601486 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165012 1 XLOC_100381 NonCoding TCONS_00165012 XLOC_100381 NonCoding NonCoding - 29:33584779-33589636 - TSS123340 918 2 TCONS_00165012_1 82 3 0.811573311367381 0 0 0 0.000144734461211657 0 0 0.00054314909226516 0 0 0 1.99493113463953e-05 0 0 0 0 0 0 0 0 1.54350099001227e-12 0 0 0 0 0 0 0 0 0.000523016629504255 6.54929250440981e-06 XR_240640.1 LOC101902283 PREDICTED: Bos taurus uncharacterized LOC101902283 (LOC101902283), 0.0 1624 100.00 0.979302832244009 0 noncoding 0 0 0 0 -0.0574766615901455 0.631946140020751 -0.00115109495553242 0.983768564667393 CTGCATGTTGTTTTATATAGATCATCACAGAACCGAAGACCGAAGACTCAGTTAGTCTCATGAAAGAACTAGGAAAACAAACCCAGGGAACTGAGAGGATTTAACCCAGGACTGACGACTCGGTGGATGACTCTGGGGTCCTTGCGCCCAGCCCAGACCAGCCCTGGAAGATGGTGGCTCATCTGCTCCTAGAGGAAGGGAACGAGGAGGGGGATGGGAAGAGGAGGGTGGGGAGAGGACAAAAGAAAAGAGCTGGAAAGATTTGAACTTCTGACCTTGGCTGGGGCAGAGCCAACGTTTTTGCTCCTCTTTGCTTCTTTCACCCCATGGCTTCTGCCCCTTGGCTGGGGCAGAGCCAGGATAACGGAGGACCCCAGCCTCCTCCCAGACTCCTGGAAGAAGGAAACTGTGCCCAAATTATCTCCGGTTCTTCGCTCAGTTCCGGGGACAAACACAGTATGAGAGTGACGTTTGCTGGACTGGATGGATAGTTAAATGATGGAAGGTGATCATCAAAGGTTATGCAGGACTTTTCACATCTCCAGGAAGAGTTCCTCAATCATTCCAAACACACAGGTGTCCTTCTGGGAGGCGATGGGGAGTGTTGCTTATCAGCCCCCCGTGCCCTATCCCTCTTCTCGCCCAAGCCCTGCTCCTCCACTTACTCAGAGAAGGCGCTGTGGCTGACACCCTGAGCCCTGACCGGGAGCTGGCATCCATCATCCTTAAGGCCCTCATCCTGGGAGAAGCTGATCCCATGTCAGGCTTTCATGTGGGCATGTCACAATTTGGCCTTGGTGGTGGTGGTGGTGTCATGGCTCCCTGTGCGCCAGTGAACAAAGAGGCCCTGGGTGATGCTGACCGCAGGCAGAGGGGAGAGGCTTCCTCTCTCACCCACGGCACATGTGATTCCTTTGC TCONS_00165009 s 5' 7441 TCONS_00165009 s 5' 7782 EMBV3_35663 GCTTCACCCCACTGGCCCTGAGCACGCCCTTGGCCCTGCCACCTCTGTTTATTTCAATAA Gene GeneID:520157|HIPK4:XM_002694990:185_cdna Constitutive 2 NULL GeneID:520157 18 GENE HIPK4 NULL homeodomain interacting protein kinase 4 EMBV3_25498 AGGAGAGCTATTCTGTGTATAACAGCTCAGAGTTGCAGGTACCACATGTGAACGATACGG Gene GeneID:532835|AZIN1:NM_001082611:26_cdna UTR3_Alt 2 NULL GeneID:532835 14 GENE AZIN1 MGC143073 antizyme inhibitor 1 EMBV3_29012 CATACAGCAGCAACTATGATCTCACTAAATAGCGTAAGAGGAAGAAACCGCCCACAGAAG Gene BVV0102_171201 - 1 EMBV3_29648 GK000027.2:39897988-39948524 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21936 GATCGAGTCCCTCCGGAACTCACACTCCAGCCTGTACAGTAACCCAGGTGGGATGCCTCC Variant GeneID:513985|VPS37A:NM_001046161:49_cdna 396^686 5 EMBV3_12683 GeneID:513985 27 GENE VPS37A MGC137205 vacuolar protein sorting 37 homolog A (S. cerevisiae) EMBV3_33020 AGATCCCAAACAACTAGCAGAATTTGCTAGTGCACGTTCGAAGGCTGCGGGAAACGCTTT Variant GeneID:534353|YY1:NM_001098081:268_cdna 631^850 1 EMBV3_12834 GeneID:534353 21 GENE YY1 MGC148794 YY1 transcription factor EMBV3_37804 ACTCAGCTGGTGGCTGGTTCCTATTTCTGCGGTTGGGTCAGTTCCATTCTCCAAGTCAGT Gene GeneID:788998|LOC788998:XM_002687520:456_cdna Constitutive 0 NULL GeneID:788998 5 GENE LOC788998 NULL similar to olfactory receptor MOR210-5 EMBV3_32189 CATCGGAAAAACCATGATGCAGAGTGGCGGCACCTTTGGCACATTCATGGCCATCGGGAT Gene GeneID:618530|ROMO1:NM_001114528:1357_cdna Constitutive 0 NULL GeneID:618530 13 GENE ROMO1 C13H20ORF52 MGC127858 reactive oxygen species modulator 1 EMBV3_25476 AACGTGGAAAGCTCAGAGGTGCATGTAGAAAGAGCCACTGACCAGCTACAGCGAGCTGCT Gene GeneID:505538|STX12:NM_001101053:78_cdna UTR3_Alt 2 NULL GeneID:505538 2 GENE STX12 NULL syntaxin 12 EMBV3_41021 GGCTCATGGCACTAGAGACAATTTTCTGTGGTAGAACTCTGGCAGCTATTTTTCCAAAGC Gene BVT0102_050307 + 0 NULL GK000029.2:33009047-33240583 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02467 AAGTAGGAGAAGAGGAAGTGGACCTGGGATTAAGAAGCACTCCCACCCCTGGCTGTCTCT Gene GeneID:616926|ESAM:NM_001078066:38_cdna Constitutive 0 NULL GeneID:616926 29 GENE ESAM NULL endothelial cell adhesion molecule EMBV3_31396 CAATCCCAAGTAAAGTGGATGAAGCAGACTGTTAAGGCAGGTGTGGTTTCCCAGTTGTAA Gene GeneID:614776|POLR2K:NM_001037623:39_cdna Constitutive 1 NULL GeneID:614776 14 GENE POLR2K MGC128521 polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa EMBV3_11437 AGTAAGAGTTCATCAGGGCCAAGACTGGGTGCCCTTCCACTCCCAGAGGACAACTATGAA Gene GeneID:514537|PCDH7:XM_002688187:12_cdna UTR3_Alt 2 NULL GeneID:514537 6 GENE PCDH7 NULL protocadherin 7 EMBV3_36254 TGGATGAGGTGGTGGACATCATGAGGGTGAACGTAGACAAGGTCTTGGAGCGGGACCAGA Gene GeneID:282116|VAMP2:NM_174483:430_cdna Constitutive 0 NULL GeneID:282116 19 GENE VAMP2 NULL vesicle-associated membrane protein 2 (synaptobrevin 2) EMBV3_24122 ACAGAGGACTTACTCCCTCAATCTGCGGATACTGGAGGCCGAGAGCCAATGGAAGAGAAA Gene GeneID:540249|GTF3C4:XM_002691651:377_cdna Constitutive 0 NULL GeneID:540249 11 GENE GTF3C4 NULL general transcription factor IIIC, polypeptide 4, 90kDa EMBV3_06717 AGGCCTAGTACAATCTTGAGAACAGGGTTGCTGTATGCTGAATGTCAGACGGTAGCTCTT Gene GeneID:615175|NONO:NM_001046554:77_cdna Constitutive 0 NULL GeneID:615175 X GENE NONO MGC128851 non-POU domain containing, octamer-binding EMBV3_05055 GGCCCGAGTCTGTTACCTGTTGCCTGGTGGCATTTCTAAGGGAGCCCAAAGAATAACATT Gene BVT0102_066106 - 0 NULL GK000011.2:3736156-3758834 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023804 TCONS_00023803 TCONS_00023811 TCONS_00023807 TCONS_00023808 1 XLOC_014364 Coding TCONS_00023811 XLOC_014364 Coding Coding INPP4A 11:3686195-3738522 = TSS17628 5280 1 TCONS_00023811_8 970 23 0.899533692619348 0.0025619020744159 0.0017504011225983 0.00258154972628372 0.0021600989999971 0.0032540270833792 0.000977040656602767 0.00177016678475931 0.00170152357604188 0.00260835405222665 0.000345394541839159 0.000144596960174657 0.000289280792413157 0.000470019014044758 3.08857665643927e-26 0.000931458028156452 0.00628231889886315 0.0025226606895731 0.00484388282982019 0.00231445801934987 0.00334002260703093 2.95987178526658e-17 0.0019810347180794 0.00101409289698091 0.00172057862778817 0.00428741772205522 0.00337780044170633 0.00133264467939702 0.000387142369182588 2.56544961736515e-05 0.00075211117253113 XM_005212338.1 INPP4A PREDICTED: Bos taurus inositol polyphosphate-4-phosphatase, type I, 107kDa (INPP4A), transcript variant X7, mRNA. 0.0 9523 100.00 0.999810606060606 NM_001134225.1 INPP4A Homo sapiens inositol polyphosphate-4-phosphatase, type I, 107kDa (INPP4A), transcript variant c, mRNA. 0.0 4304 88.09 0.636363636363636 TCONS_00023811_8 sp|Q96PE3|INP4A_HUMAN INP4A_HUMAN Type I inositol 3,4-bisphosphate 4-phosphatase; 0.0 1925 94.69 0.998969072164948 0 coding 0 0 0 0 -0.0480736729739986 0.673030075926629 -0.0590426484470812 0.492077355569848 ATGACAGCAAGAGAGCACAGCCCTCGCCATGGCGCCAGGGCCCGTGCGATGCAGCGGGCTTCCACCATCGATGTGGCAGGCGACATGCTGGGCCTCTCTCTGGCAGGAAACGTACAAGATCCAGATGAGCCCATTTTAGAATTCAGCTTAGCCTGCAGTGAGCTGCATACTCCGTCACTTGATCGAAAACCAAATAGCTTTGTGGCAGTGAGCGTGACCACCCCACCCCAGGCATTCTGGACGAAGCATGCACAGACGGAGATCATCGAGGGAACCAATGATCCTATATTTCTAAGCAGCATTGCCTTCTTTCAAGACTCTCTCATCAATCAGATGACACAGATCAAGCTGTCCGTGTATGATGTCAAGGACAGATCTCAGGGAACAATGTACTTGCTGGGGTCCGGAACTTTTGTCGTCAAAGATCTGCTCCAGGACAGGCACCATAGGTTGTATTTAACACTAAGGTCTGCAGAGAGTGACCGCGTGGGCAACATCACCGTGATGGGCTGGCAGATGGAGGAGAAGTCGGATCAGCGGCCCCCAGTGACCCGGTCTCTGGACACCGTCAACGGGAGGATGGTTCTGCCTGTTGACGAGAGCTTGACTGAGGCCTTGGGGATCCGATCCAAGTACGCTTCGTTGCGAAAAGACACTTTACTGAAATCGGTGTTTGGTGGTGCCATCTGCCGCATGTACCGCTTCCCGACCACCGAGGGCAACCACCTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCTGTCCCTGCACGTGCCCCGGCAGTTTGTGAAGCTCCTGCTGGAGGAGGACGCGGCCAGAGTATGTGAACTGGAGGAGCTGGGGGAGCTGTCCCCATGCTGGGAGAGCCTCCGGCGCCAGATTGCCACACAGTACCAGACCATCATCCTCACCTACCAGGAGAACCTGACCGACCTCCATCAGTACAAAGGTCCCTCGTTCAAAGCAAGCAGTTTGAAAGCAGATAAAAAGCTAGAATTTGTTCCCACTAACTTACACATACAAAGGATGAGAGTTCAGGATGATGGAGGAGCAGATCAGAACTATGACATCGTCACCATTGGGGCGCCAGCAGCACACTGCCAGGGCTTCAAGTCGGGAGGGCTCCGCAAAAAGCTGCACAAGTTTGAAGAGACCAAGAAACACACGTCATCCAGCTGCCAGTCTATCATCTACATACCACAGGACATCATCAGGGCTAAGGAGATCATCGCCCAGATCAACACCCTCAAAACCCAAGTGAGTTACTACGCCGAGCGGCTCTCGAGGGCGGCCAAGGACAGGTCTGCCACTGGCCTGGAAAGAACACTTGCCATCTTGGCAGACAAGACCCGGCAGCTGGTCACTGTGTGTGACTGCAAGCTGCTGGCCACCTCCATCCACGGGCTGAATGCCGCCCGGCCTGACTACATCGCCTCCAAGGCCTCGCCCACCTCGACCGAGGAGGAGCAGGTGATGCTGCGGAACGACCAGGATACCCTCATGGCTCGGTGGTCGGGCAGGAACAGCCGGTCTTCTCTGCAGGTGGATTGGCACGAGGAGGAGTGGGAGAAGGTGTGGCTGAATGTGGACAAGAGCCTGGAGTGCATCATCCAGCGGGTGGACAAGCTGCTGCAGCGCGAGCGCCTGCAGGGCGAGGGCTGCGAAGATGGCCTCCTGGGCGCCGGCAGCGGCTCCAGCCGGAAAGGTAACCAGGGCAGCCAGGCCTACTGGATCCGACCGGAGGACGTCCTCTGCGATGCCCCCTCCTCACCATGCCCCTCCGCTGCATGCTGCCCTCACCCGACCACACCCACACATTGCAGCCCCCCTCCTGAAGAGTCCAGCCCAGGTGAGTGGAGCGAGGCCCTGTACCCGCTGCTGACGACCCTCACCGACTGCGTGGCCATGATGAGCGACAAGGCCAAGAAAGCGATGGTCTTCCTGCTCATGCAGGACAGCGCGCCCACCATCGCCAGCTTCCTGAGCCTGCAGTACCGCCGCGACGTGGTCTTCTGCCAGACGCTGACGGCGCTCATCTGCGGCTTCATCATCAAGCTGAGGAACTGCCTGCACGACGACGGCTTCCTGCGGCAGCTCTACACCATCGGGCTGCTGGCGCAGTTCGAGAGCCTGCTTAGCACCTACGGGGAGGAGCTGGCCATGCTGGAGGACATGAGCCTTGGGATCATGGACTTGAGGAACGTGACCTTCAAAGTCACTCAGGCCACTTCTAACGCGTCCACTGACATGCTGCCCGTCATCACAGGAAATCGGGACGGCTTTAATGTGCGGATCCCGCTGCCGGGCCCCCTGTTTGATGCGCTGCCCCGGGAGATCCAGAGCGGGATGCTGCTGCGGGTGCAGCCCGTGCTCTTCAACGTGGGCATCAACGAGCAGCAGACGCTGGCCGAGAGGTTCGGCGACACATCTTTACAAGAAGTTATCAACGTGGAGAGCTTGGTGCGGTTAAATTCCTACTTCGAGCAGTTTAAGGAAGTTCTGCCTGAGGACTGTCTACCTCGATCCCGGAGCCAGACATGCCTGCCAGAGCTGCTGCGGTTCCTGGGTCAGAACGTGCACGCCAGGAAGAACAAGAACGTCGACATTCTGTGGCAAGCCGCCGAGGTCTGCCGCCGCCTCAACGGGGTCCGGTTCACCAGCTGCAAGAGTGCCAAGGACCGCACGGCGATGTCGGTGACGCTGGAGCAGTGCCTGATCCTGCAGCACGAGCACGGCATGGCCCCGCAGGTGTTCACGCAGGCCCTGGAGTGCATGCGCAGTGAGGGTTGTCGAAGAGAAAATACAATGAAGAATGTTGGAAGTCGCAAATATGCGTTTAATTCCCTGCAGCTGAAGGCTTTCCCCAAGCATTACAGGCCTCCTGAAGGGACTTACGGAAAAGTTGAAACATGAACACACGGTCTCCTCTCATTAGCTGTTCCGTAATAAACGTGGGTGCCCTCTAGTCTATACATGAATTCTTCAAGAAGACCTGAAGGATTGGTTTTTACTTTTGTGTTTTTAAAATATTTCACTCAAGAGTCTATGGAGCATGTGTTTTTTTGCGTTGGAATCCATAGCAGGTATTGTCGGGCTCACTGCCGTGGATAGTAACAACTGCCCCTTCAAGTAGCCTTCAGCCGTCACCACACGGATATCCGTAGTTACCTGTATGAACCAAGCCAGGTGCATCTGAAATGCTGAAACTTTTTAAAATGCACACTTAGGCAGCTGCTCACCTTATTTTTCTACTGAGTAATTCCAACTTGAACATTGATTTACAACCTACTTTTTAAAAATCCCCATGGAAAATAGTAAACAGTAGTTTAAATGATTGGATCCTGGGCAGACCTCTAAATGTGAACTGTTCAAGGGAAGTTTTGGGAAAAGCAGCTTGCTGTCTCACGTGGGCAGGGCAAGTGCATCTATGCATCAGCCTGCCAGTGCCTACACAGGTGGAACCAGCAGTTGAAGGAAAGGCTGTAAGATGTGTCAGAAGACAGCATCTGCAAAGCCACCCACGGTGGGGTCACCACTGTCCCTTAGGGAACAAGGTGTCTGGGGAGGTGGTGAGGCCAGCTGTCTCTAGCCCTGGCCCCAGAGCGCAGGACCGCTCATGTGGTATGTCTGATGCCTGTCAGTCAACAATGGGGAATTTTGCATAGAGACAGTGGACACCTAAATATTTTACAAGTAGGTCTCTGGTGGGTTTCTCAATTTTTTTGGCCTTCGAGAAGATAATGCAATCATGTTTGAATGTCTGATGAAAGTGTCTTTAGGTTTGCAATAATTGTTACTACCCTCTACTCGTCTATTATGTAAGATGGCTGTTGAGAACGTTGAACTGTCTCCTGAAATGAGATTTTGAAAGGGATTAATGGGCCATAAGACTTAGGAATTTCATAGAAAATTATGTTTGGTCATCTATTCTAAGATGATGAGTCATCTGCACAGAGCAGAGTTTTTTTCTTAGTTTATGTTTTATCAATTGTTTTTTTATCATTATTATGTTTACATGCTATTTAAAAGGCTGTAAAAGAAATACATGTGGCACATATTCATGATGTTGATCCTAAAGATTTGTGAACCCTTAGGAAGTTCCTGTGTCTGAAATTCTAAATGTTATTCTTTGGGCTCCCTTAGAAATGCCACCAGGCAACAGGTAACAGACTCGGGCCTGGAGAGCACAGGCAAGACCACCCTGTGCAGGGATGCAGGGTGGGCATCAGGTACGGGTGAAACCAGGTGACCTCCCGGACCCCCTCCTCCTCAGGTCAGTTCACACACGGAGCCTGCTGTCTGCCGACGCCCACTGGTGAGTGTGAACTGGTGTGGAGGGCGGGTCAGTGAGGCACACAGAGGCAGGGAAACTTGCCCAGCAAGCCCACTGTACCGCTGGTGTCAGCTTCTCCCGCCGTGTCCATCCCCGTCCAAAGACGACTTTGTGATGGCAGATTTAGTCTTTCACTTTCACCATTTCATTGTCTGGTTAGCTCTACCTTTCCATCTTTACTCACTTTAACATCACTACGTTTTAAAAAAATTCCCTTGAATTTTTAATGTTATTCATATAACTTTCAGATTTTTTTTTTTTGGTCTGAAGAGCATTACCTGCATTTATCAAAAGGGAATAGAGCAAATGCTGTGTCATCTGTTTGCAGTTTTGCATGTGGCACCTTTTTGTGAATATTCTCCTAATTTTGTCTACATATTATCGATCACCAGAAGAGTCTAAGACTTGGCTAATCACATAGAAGATACTCTGGTTGCAGTATTCCACCTGAGTGTGACTCCCTGGCTCCTGTGTGACCGTGGGTCTCCCAGCGGCACTGGGCATGCTCGCCGAGGGGGGCCATGCTGCTCACCGCGATAGCCGCGGCTCCTCAGGTCACACGGGAGCTTTGAGTTTCCCGCGGCAGAAGACAGGCAGTGGTCCAGGTCTCTGTAAAATAGGGGTTCCAGCCAGTGTTCCCTATAAGGCCCCCACTTAGAAATGTTGTGACGTACTGAAAACTCAGATGGGTTCTGTCAAAGCGTCTGCAGCTCAGCTGCCTCTGGTTTCCTTTAAAACATGTACAAACATTATACAATACAGTTTTGTCCCTACACAATTGTATTTGCCAACCTTAGTGCTTTAAGGTACTTTTATTTATTTGTTTTGGACAGTATTAATAAACACATAGTTACTGTTTTATATATTCTTAGCTCATTCAAAGCCATGTATGCTATAAATGTGCGAGTCTTTAGAATGACAAATAATAAACAACTGACAACATGAAA EMBV3_32127 AATTTCCTTCTCTGCTCAGTTCCACCTGTGCGAATCCTGCTTATCTCCCATGGACTGACC Gene GeneID:514352|TBX19:NM_001075663:2_cdna Constitutive 0 NULL GeneID:514352 3 GENE TBX19 NULL T-box 19 EMBV3_43232 GTGCACAGAAGTAGGAGAATAGATTGCACTTAGCCGAAGTGTTGAGAAACACTGGCGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06619 TCCCGGGCTCAGCTTCGCCAGCTCTTCAAGGTGTGGCATGCTGGTTGATCTGTGCAGGGG Variant GeneID:511740|TARS2:NM_001101945:88_cdna 644^708 2 EMBV3_39289 GeneID:511740 3 GENE TARS2 TARSL1 threonyl-tRNA synthetase 2, mitochondrial (putative) EMBV3_03211 ACACTACATTCAAGTCTGGAGAAACCATGTGGAAGCGTACAGTCGGTGTGGCCTGGAGCT Gene GeneID:511202|SECISBP2:XM_002689859:11_cdna Constitutive 0 NULL GeneID:511202 8 GENE SECISBP2 NULL SECIS binding protein 2 EMBV3_30320 AGTCACAACTAACTCCCCCAGAGAGTGGGTCCTCACGAAGCTGGACCTCAACCAGGTGTG Gene BVT0102_374690 - 1 EMBV3_16848 GK000011.2:72868414-72920570 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32591 ATATGTGCTACCTGACTGGTTTCATAATCTTCTTCAAGGCCCCTGGAGGGTGAGGCATGC Gene BVT0102_071148 + 0 NULL GK000009.2:82186811-82238954 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39085 AACACCCAAGCGGCCCACGATGGCATCTACTCCACGCAGAAGAACTCCTCGGAACAGTTT Gene GeneID:506758|CHST3:XM_002698871:475_cdna Constitutive 0 NULL GeneID:506758 28 GENE CHST3 NULL carbohydrate (chondroitin 6) sulfotransferase 3 EMBV3_08483 TAATCAGGTTGGAGATGTCACGTTTGGTCCACTGGCCGTGCAGAAAGAGACCCACTAAAG Gene GeneID:444859|ST3GAL3:NM_001002882:50_cdna Constitutive 0 NULL GeneID:444859 3 GENE ST3GAL3 SIAT6 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 EMBV3_17801 ATGAGGGTTTCTTGCTGCTTTGGGAGGGCGTGGGGGACATTTTTGTCTCGGTTTCTGCAA Gene BVT0102_027430 + 1 EMBV3_18374 GK000025.2:17585735-17588927 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24494 ATGTGCCAAGTTCCCACTCAAGGGTTTACTTACTAGTGGGGGAGAAAACCAAGCAGTGCC Gene GeneID:515578|LOC515578:NM_001075719:17_cdna Constitutive 0 NULL GeneID:515578 24 GENE LOC515578 NULL similar to C-terminal binding protein 1 EMBV3_24996 AAAACGACCCACCAAGGACAGCTATACCCTGACGGAGGAGCTAGCCGAGTATGCTGAAAT Gene GeneID:540576|MAG:NM_001040570:724_cdna Constitutive 0 NULL GeneID:540576 18 GENE MAG NULL myelin associated glycoprotein EMBV3_28727 GTCAGCTATCTTCCGAGACTTTCTGAACCGCTGTCTTGAGATGGATGTGGAGAAGAGAGG Gene GeneID:533729|PAK1:NM_001076898:28_cdna UTR3_Alt 2 NULL GeneID:533729 29 GENE PAK1 MGC139676 p21 protein (Cdc42/Rac)-activated kinase 1 EMBV3_29443 AGGAGTTTAAGAGAAAGCAAAACAAAAGCTTTGTGAGCTAAATGTATAAAAAAGCTCTGC Gene GeneID:535613|NCAM2:XM_002684635:2_cdna Constitutive 0 NULL GeneID:535613 1 GENE NCAM2 NULL neural cell adhesion molecule 2 EMBV3_18390 GAATGCCAAGAGGTACTCAAAGCAGTCAAAGAAAGTCAAAGGCTATGCCCCAACTAAACT Gene BVV0101_026838 + 0 NULL GK000011.2:24539716-24707226 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36462 ACCGAACCACCTCCTCGGGTCGGCGCTGCGGACTATAGCCGGCCTGATTGATCATGGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11947 GAACCGGCGGATGAAGTGGCGGCACTCCAAGGAGGCTCAGGCCCAGAAGGACAAAGACAA Gene GeneID:519165|HLX:NM_001101097:47_cdna Constitutive 0 NULL GeneID:519165 16 GENE HLX HLX1 H2.0-like homeobox EMBV3_20991 GACAGGCCCCAGGCGCTGCAGGCGGCGCTGCCTGGCCTGGGTCTCCAGTGAGAGCGCCGC Variant GeneID:100126049|NUDT14:NM_001105652:5_cdna 288^656 1 EMBV3_29103 GeneID:100126049 21 GENE NUDT14 MGC152213 UGPP nudix (nucleoside diphosphate linked moiety X)-type motif 14 EMBV3_40507 GGAAACCGAGGCTCAGAGAGCTTAAATACTTGCTGGACGACCTTGTAAGTCAAGCCCATC Gene BVT0101_036937 - 1 EMBV3_04880 GK000021.2:22859979-22876991 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04058 CGGCTGACTCTGAGCCACCCCCTCATATGTATTCGTGATGAGTCAGGACTCTGGATTAAA Gene GeneID:540247|CMTM4:NM_001083749:387_cdna Constitutive 2 NULL GeneID:540247 18 GENE CMTM4 MGC139432 CKLF-like MARVEL transmembrane domain containing 4 EMBV3_01936 ATTGGTGACTTCCTCAAGGATAAGTATGACAGCGCCTCAGAGATGGTGGTGGAGAAGCAC Gene GeneID:522467|WNT3A:XM_002688509:34_cdna Constitutive 0 NULL GeneID:522467 7 GENE WNT3A NULL wingless-type MMTV integration site family, member 3A EMBV3_41674 GCCAGGATGGATTTCCAGATGCCTGAGGAGATGAAGCAAGCACAGCAGTTCCAGAAGGAA Gene GeneID:616977|LOC616977:XM_002689535:190_cdna Constitutive 0 NULL GeneID:616977 8 GENE LOC616977 NULL similar to Interferon beta-2 EMBV3_41571 GGCTCCACAGTCCCCCAGTTCCAGGTTCTGGGTGGCAATCCAAGCCTACCTTGTGGATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20113 AGCCACAGCAGCCAAGAAGAGTTCCAATGCCGTGTGCTTCAAGGATGAAAGGACGAAAGA Gene GeneID:100295153|LOC100295153:XM_002699652:153_cdna Constitutive 0 NULL GeneID:100295153 X GENE LOC100295153 NULL hypothetical protein LOC100295153 EMBV3_20701 CCCCAAATCTGTGGAATTCTGGTTCTGGTTAGCTGGGCCATCAGTGTCCTTCATTCCTTG Gene GeneID:506822|LOC506822:XM_002688608:378_cdna Constitutive 0 NULL GeneID:506822 7 GENE LOC506822 NULL similar to CfOLF4 EMBV3_35652 AGAGTCAGTATGGCGTCCGTGTCAACTGCATCTCCCCTGGAAACATCTGGACCCCTCTGT Gene GeneID:282652|HSD17B14:NM_174701:62_cdna Constitutive 0 NULL GeneID:282652 18 GENE HSD17B14 SDR3 retSDR3 hydroxysteroid (17-beta) dehydrogenase 14 EMBV3_03241 CCAATGGCACAGCAGGTACTAAAGTGGCTCTGAGAAAAACCAAACAGGCGGCCGAGAAAA Gene GeneID:511845|ABL2:NM_001143855:97_cdna Constitutive 0 NULL GeneID:511845 16 GENE ABL2 ABLL v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) EMBV3_04607 GACTCTGGTGGCACAGGCAGCTGTCGTAACAGGTAGTCCGAAAGGTCAAGGAAATGTTGT Gene GeneID:100295842|LOC100295842:XM_002692471:535_cdna Constitutive 0 NULL GeneID:100295842 13 GENE LOC100295842 NULL similar to elafin preproprotein EMBV3_26055 GCCAGTGAGGCAGAATACCGACAGCAGCAGGGTCCACAGGGAGAGGAGGCCCGGAGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40386 GCCTCAATATGTGCCGCCAGTGTTTCCGCCAGTATGCGAAGGACATCGGCTTCATTAAGT Gene GeneID:286884|RPS29:NM_174804:28_cdna Constitutive 0 NULL GeneID:286884 10 GENE RPS29 NULL ribosomal protein S29 EMBV3_35180 CTTAATGGATATCATCACATAGTACAACAGGAAGCTGCTTTAAAGAATAAAAAAGAACCA Variant GeneID:614512|FANCL:NM_001076332:170_cdna 240^296 5 EMBV3_34669 GeneID:614512 11 GENE FANCL MGC133719 Fanconi anemia, complementation group L EMBV3_32125 TTCATGTGAAGCCATACCACTATAAAATTTTAGGATGCCAGGCCTGTAAGGGGCCCATCC Gene BVV0101_005126 + 1 EMBV3_06172 GK000011.2:68485439-68495668 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17480 TCTAACCCATATGCACGTAGCCGTCCTCCCTTTGGTCAGGGCTATACCCAACCTGGACCA Gene GeneID:505171|TFG:XM_002684718:29_cdna Constitutive 1 NULL GeneID:505171 1 GENE TFG MGC129137 TRK-fused gene EMBV3_22621 TTGACGTGCACCACAAGAAAACCTTGAATGCTTCTTAATTACAAGGAATTTAAGCTGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31423 GCTTAAGCTATCGGACTGGTTCAACCCATTATACATTGAGCATTACTTGGAGGAGTTCTT Variant GeneID:281780|GGTA1:NM_177511:24_cdna 746^883 6 EMBV3_40873 GeneID:281780 11 GENE GGTA1 NULL alpha-galactosyltransferase 1 (glycoprotein) EMBV3_16197 CCCGAAGGCTCTCCGTCGAAGGCAACATTGGCCGGCGCTGCCACCAGCCTTGGAAACTTG Variant GeneID:509834|DGUOK:NM_001014888:5_cdna 174^286 3 EMBV3_37126 GeneID:509834 11 GENE DGUOK MGC137088 deoxyguanosine kinase EMBV3_00723 CTGCATGCTGAATGAGTGAAAATGGGAAAACTGGGGAGCAAGGGAACAGAGGGCAAAGGA Gene BVT0102_114344 + 0 NULL GK000021.2:55626671-55629682 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40659 AGCCTTGAAGCTTCTTTTCTCTGACTTGTGTTCAGAGCAGTGGTCCTGACGACTTGCATC Gene BVV0102_257960 + 1 EMBV3_31879 GK000014.2:78715803-78760472 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053967 TCONS_00053966 1 XLOC_031869 NonCoding TCONS_00053966 XLOC_031869 NonCoding NonCoding - 14:78727488-78730101 - TSS39701 1344 2 TCONS_00053966_1 43 2 0.486217457886677 1.89913349730263e-09 0 6.87844697249213e-06 0 0 0 3.47080930752336e-05 7.04090766885651e-05 4.10882831520549e-05 7.04083797328996e-05 8.60447532316745e-06 1.24847095749891e-11 0 0 0 0.00049470061441764 2.74885676609706e-10 1.86492876145281e-05 0 0 0 7.36831045272917e-09 6.68856401057834e-05 0.000399152328273935 0 0 0 7.13939291361975e-06 8.98050109023614e-06 2.99035560026878e-10 0 noncoding 0 0 0 0 CCATGATGTGTCTTTTGTGGAGAAAAGCCATTGCTTTGAATAAGGATATTGATTTGAGAAGAAAGTCGTGAGAGAAAGTTTAAATTTTAAATCGATCAATCCAAAAGAAAAAAACAACAACAAAGCCTTGAAGCTTCTTTTCTCTGACTTGTGTTCAGAGCAGTGGTCCTGACGACTTGCATCTGTGTGACTGTGACCCTCCTCAGTCCTGTGATCCTCTCTCTCGTTGGAACAGCAGGTCTTTACATTGGGGCTGTTCCCGGAAAAACTTAAGCTACGTATCAACCTTATTTTTATCGTCTTAGTACATATTGTGGTTAAAAAACATGCTAAACCCATGATTCTTTCTAAGTTTCAGTGGAAAGGATCAGTTGGCATTTGTTTAAGGAGCCTATTGTTTTCGTCTATTTCCACTGACTGACCAGTTCTTTGGGAAAAAAAGTGACAATAAACTCATCTCTTTTTGTCCTTCAGGCTGTGAAATGTGTTGATGTTTAGATGTGACTACCCAGAAAGGAAAGTGTACATCATACTCAGGAATTTCAGTGTGCTACATTAGAAGTTTTTGATAAGAAAACCAAGCCTCAGAGAGGGTGGTGAATACAACCGAGTAGGAGAACTGAAGTTTGGACTCTGCTGACATTGTCCAGCATGCTCTTCTCACACTAGGAACTGGCACTTTGAAACTGGAGAGTTAGCAGATCTCCACGGCTGCTTACCTGCTGGGAACTGAGAAGCCTTCATGTATTTGGAGATAGGCAGGCCGCGTTGTGGGGTGAATGTCGCTTTGGGTTGTGCTGTCTAGTGGCCAGTGCAGGGCAGAGGGGTGCTGGCCTCAGCAGCGGGCCTGGGTTTGGCCTTGACATTAGGAACCTTTCTGTGTGTCCCTCAGCGGTTCTCTCAATCACCTCTCAGCCTCAGCTTCGGCTCTGATTGGTGACTCGGTGCTTTTTGCTACTTCAGAGCAAATACTGTGTATTTGAAAAATACCAAGCCTTTAACATTTTTGAATTTGAAGGAAAGTTTTATAGGCACATATTATTAAAATACTGCACTTTGAAAGAAATGACAGATTATTGATGGAAATGTTTGTCATTTTGAAATATGAACTGTTACATGATGTAATTAACTTGAAATTTGATCTTTGCAGAGTGAGAATGTTACATTGGCCTGGATGTTGTTTCCCAGAATACATGGAAATGATTTATTAAACACAGTCCCAGCAGTCTACCTTCTTCATTGTTATGTGTTTATGCTTTTTACACATTCCTTGTTTTAAAATACTTTTTGAACTTTCAGGGAAAGCATTTTTAGTGACCTAGCTTAAAAGCCCCACAAAACCAC TCONS_00053962 TCONS_00053963 s 5' 27756 TCONS_00053962 TCONS_00053963 s 5' 28531 EMBV3_12823 GCAGGGAGGTTATGAGGCTTAATAAAGAAGGGAGAAAGCAAGACAAGAGAAATGAAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19975 CTTTCGTCGCTCCTCATTTCTTACCCGACATCAGCGAATTCACGCTGGAGAGCAAGCTTA Gene GeneID:788928|LOC788928:XM_002695340:26_cdna Constitutive 0 NULL GeneID:788928 18 GENE LOC788928 NULL similar to zinc finger protein 420 EMBV3_34194 GGCTTCATTGATACCAACCATGTCCAGACACTCATGGGCGAAGTGTTTGAGAAGCCCTTG Gene GeneID:618574|BPIL1:XM_002692293:1666_cdna Constitutive 0 NULL GeneID:618574 13 GENE BPIL1 NULL bactericidal/permeability-increasing protein-like 1 EMBV3_31867 GGGTGAGAGGGTTACCCCTTCCCAGTGTTTTTTATTCCTGTGGGGCTCACCCCAAAGTAT Gene GeneID:527852|SERF2:XM_002696809:570_cdna Constitutive 1 NULL GeneID:527852 21 GENE SERF2 NULL small EDRK-rich factor 2 EMBV3_19746 CAACCACTGGATCACCAGGAAAGTCTGCCTCAGTGGAGTTTTGACTTTTCCCATTTTCCA Gene BVV0102_003684 + 0 NULL GK000007.2:51308204-51313473 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217073 TCONS_00217071 TCONS_00217069 TCONS_00217072 TCONS_00217068 TCONS_00217070 1 XLOC_131411 Coding TCONS_00217073 XLOC_131411 Coding Coding CDC25C 7:51308822-51344179 j TSS161741 6875 1 TCONS_00217073_3 386 0.171345454545455 14 0.805945242674511 0.000465596957898617 1.01989678049323e-12 0.000493012189343985 1.87002503995448e-11 4.90828070008049e-07 0.000188145325876695 0.000489886053288971 1.05420393435684e-13 0.000745145663779389 5.37985261393086e-07 4.98010390515218e-11 2.39717307983805e-10 5.23885759959089e-06 1.14059563552926e-05 1.1345065503887e-11 2.26272151023951e-07 1.3690481433155e-14 1.64822447159744e-05 0.000585637702537286 3.57719588892386e-08 1.56296195097548e-16 0.0015519516192099 1.09062825088166e-07 2.291721467091e-07 0.000373166209424123 0.000213695604889983 3.23078026015875e-07 5.80583935561663e-12 1.28122722201102e-07 0.000768289971890942 NM_001097996.2 CDC25C Bos taurus cell division cycle 25 homolog C (S. pombe) (CDC25C), 0.0 1939 100.00 0.156218181818182 XM_005272144.1 CDC25C PREDICTED: Homo sapiens cell division cycle 25C (CDC25C), 0.0 1205 85.40 0.153309090909091 TCONS_00217073_3 sp|A5D7P0|MPIP3_BOVIN MPIP3_BOVIN M-phase inducer phosphatase 3; 0.0 704 100.00 0.893782383419689 1 coding 0 0 0 0 -1.32781724699043 0.085079278411438 -0.0734139721587084 0.33298695068442 GCGGAAGGTTTGAATGGTCAAGGCTTTTGGCTGTTAATCTTACTCTTAGGCTGTAACTTCAACCTGCTGAGAGAAGCGGCGAAACCCAAACCTGGCCTATCTGGTCGAGAGGCATAGATGCAAGTCTCGGACTCAAACCTGCGAACTCGGAGACCATGTCTGCAGAATTCTTCTCATCCAAAAGAGAGGAGGGAAGCCTTGCCTCAGGACCTAGTTTTAGGTCCAATCAGAGGAAGATATTAAACCTGCTCCTTGAGAGAGATGCTTCCTTTTCCATCAGTTCAGATCTCCCTACAACTCCAGTGGAGAAGAAACTTTTTGGTGACTCTGCAAACCTAAGCATTTTGTCTGGAGGAACCCCAAAACGTTGCCTTGATCTTTCGAATCTTAGCAGCGGGGAGATGTCTGCCACTCAGCTTACTGCTTCTGCAGACCTTGATGAAACTGGTCATTTGGAGTCTACAGGACCTGAGCAAGTACGGTTAGCTGGAATGAATTACCGCCAACATCTTATAAAATGTAGCCCAGCACAGCTGTTTTGTAGCACTCCGAATGCCTTGGAGCATGGCCGCAGGAAGAAAGATGCAATATGTGGCTCATCTGCAAATAAGGAAAATGACAATGGAAACTTGGTGGAAAATGAAATGAAACATCTGGGCAGTCCCATTACTACAGTTTCAAAATTACATAAAAATCCAGAGCTAGCAGAAGATCAGGCAGAAGAGATATCAGATGAATTGATGGAGTTTTCACTGGAAGATCAAGAAAAGGCCAAGCCACCTCTGAACTGGAGCTCCCTGTATCGCTCCTCATCATTGCCAGACAGCTTAAACAGTCCAAGTTTGAAGCAGGTGGTAAAATTCAAGGACAGCACAATACCAGATAAACTAAAAAAGAAGTATTGTTCAAACCAAAAAGAGCTCGGAAAGGGCTTAGGTCTAAAGAAAATGGTCTCCCTCTGTGACATCAATATGACTCAGATGCTGGAGGAAGATTCAAACCAGGGGCCTCTGATTGGTGATTTCTCCAAGGTATGTGCACTGCCAACCGTGTCAGGGAAACACCAAGATCTGAAGTACGTCAACCCAGAAACAGTGGCTGCCTTACTATCAGGGGAGTTCCAGGGTCTGATTGAGAAGTTTTATATCATCGATTGCCGCTATCCATATGAGTACCTGGGAGGACACATTCAGGTGCCGTTCTCTGAGAGAAGAGGACAGGACTCTGAACCAGTATCCTGCCCTGTACTACCCAGAGCTATACATCCTCAAAGGGGGCTACAGAGACTTCTTTCCAGAATATATGGAGCTGTGTGAACCACAGAGCTACTGCCCGATGCATCACCAGGACCATAAGGCTGAGCTGCTGAGGTGTCGAAACCAGAGCAAAGCATGGGAAGGAGAGCGGCAGCTGCAGGAACAGATTGCCTTACTGGTGAAGGATGTGAGCCCATGATATCAGGTCACCTACTGGCTGCCTGGGACTCACCAAAAGGCACTGTAGAAACCCTGAGGTGAAAGAGGCCATCTTCTATGCAGCCTCTTTTCATTGTAATATGTTAAAAGATGTCAGCAAACCAATAGGCTGCCAAACTAATGAAATCTCAGGCGTGGGATTGGTTACATTTTAGTAGAGCTGCTGGCTAGTGAGGAAGTCCTCGAGCTAGTTTTCTAAGGTTGGAACCTTGGGTTGCATGGAGATTTATGTTGCTTCAGGGGGCTGTTGCATTCCTCTTGCTAACTACTTGCGTCTTCTCAGAGGTCAGCCAGATCTTTTTCCTGGGCTCTGGCTATGCAAGAGAGTGTTGAGAGAGTTGTCCATCTTCTTTCTCTGTATTTTCCTTCTTTGTCTCCCTCTCTCTTCTTTTTTAAAAAATGGAAATATAAACATTGATGAATGAGAAAAAATCCTAGAAGATGTATGTAAGGAAGTAATCACCACATTTAAACTCCTTCAGACAAAGATGTGGCCATCTCTATTCATAGCTGAGGCCAAAGTGCTTTTCTCCAGACCATGGTTCTCAAAGTTTGGGCCCTGGTCCATCAGCATTATCTGAACTTTGCTTGAAATGCAGGTTTTCACAGCCCACTCCAGACCTACTAAATCAGAATGTCTGAAGTTAGGGCACAGAAATATGGGTTTTAAAAATCTCCCTTTCAGGTGATTGTGATGCATGTCAAGGCTTGAGAACTACAGCTCTGGAATTAAAGAAAACCTTTTAAATGGAATTCTTCAGCAGTGTTCCAGACTTTGCTTTCCTATACCATTCCATGGTATGAATTGCCTAAAAGTGTGCCCCAGACTCAATTCTTTGTGGTATGAAGACTCAGAAAACCAAAATAATTGCCATTCTGTAAGACCAAGTGATAGGTCTGAGTTGCATTCCAAAGGTTCCTTATCTACAGCCTCAATAGAATTTAAAAAATATTTATTTATTTATTTATTTTTGGCTGCACTGGACCTTTCCTGCTGCTCGGGCTTTCTTCTAGTTGCAGAGTGGGGGCAGTGTGTTGGAGGGCTACTCTCTAGTTGTGGTGCTTCTCATTGCAGTGGCTTTTCGTTGGAGAGTACAGGGTCAGTAATTGTGGTGCACAGGCCCAGTTGCCCTGCAGCATGTGGAGTCTCCCAGACCAGGGATTGAACCTGTGTCCCCTGCACTGGCAGGCAGATTCTCAACCACTGGATCACCAGGAAAGTCTGCCTCAGTGGAGTTTTGACTTTTCCCATTTTCCAAAGTTTTTTTTCCACTCTACTTCATGTTTCACAGAGACAGATTTAGGATGGTTGGAAGTAGACATCCGTGCCATATGAAGATAAGAATGAAAGAAAAGAAAAGTACCAAGCAAGATCAGTTAGACTTCAGAAAGATTATTTAATTTAATTAATCAATTAAAAAAAAAAATTTGGCCGTGCCGTCTGACATTTTATATCTTAGTTCCCCAACCAGGGATCCACAGAAAGATATTTTTAAGTTACACTCTTCAGCATTACCTCAGGCTTTCCTTTTTTAGAGCTCTTTAAGGTGAGTAGGTTTTTGTCTGTGTAGTAAAGTACAGCCCTACTTGGCCTGGATGGCAGTGGAATTGCACATTGTCATTCTGTGGCATTAACCTGGTAAGTAGTGATAGCTCAGAACTAGAAATGGACAAAAGGCTGTGAAGCCTAGCCTGAGATAGAATGGAGACAAAAATGATACCTTCCCAGATTTGGAGCAGGGAGACTTTTTAAAAAATGATTGGGAGGGAAGAGTGTGCCCAAGTGACTGCATTGATTTTTGTAAGGTTCAAGAACGCTCTTCTCCCAGAGTGCTGCATGCTTGCCTCACAGCAGAGGGCACTGCTGTATTCTCTAAGGCAGCCACTGCAGCCTGCAGTCTCTACCCCTAGCTTGAACCTGCCTGTCCTGAGCCCTTGAGCTCAGAGCTCAGACAGGCTGGGGGAAAATGGAGAGAAGAGCTGCTGCTTTAATAGGTGGAGACAGCTGAGGGAAAGATGCTGTTCTTTTGTCCCACTCCACATACTTCCTCACAACAGGCAGGAGCTTAGTCGCCTGACCAGGAAACTGCATGAAGCACCTCCACTTCCAAGTGTGAGGAGGGGTCCCTGACTGACTGCCTACCCTAGTGGGTCATTTCCTATAATTCTTCCCAGAAAGGGAGAAGCAAGCCCCTACCTGGGAAGAGACTGGTGCACACGTATTCACATTTCAGTGATCTTAAATGGAAGTTCTGAGTTGTAAAACATAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCCACCAAGCTCCTCCGTCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCAGGACTTAAAAAGCTATCTACTTTGTGGAAAATTATATTTGCCTAAAAGGCTACATTTTCCCATATAGTTTCTTGAAATATCTTCCCACTGTACAGGTACCATGTCACGTGATTCATGTTATTTTCAGAAACAATAATAATAATAGCTAACAACCTTTCAGTTGTTTACTGCTTGCAAGTAAACATTTACTCATTTTATATAAATAAACTAATTTTCACAACAATCCTGTGAGGCAAGTACGTAGTCACTATTATACATGTTTTACCAATAAAGAAATTGAGGAACAGAGAGACTGAGTAACTTGTTTAAAGTCCCACAGCTAATGAATGCCAGAGTTGAGATATGAACCCAGGCAGTATGGCTCCAGAGTCTGTAATGTTAATGGACTTTGCTGTTACCAAATCCTCATCGATGGAACGATGTGTCTTTCTAAATTGGCATTGTATTAGGTGTTAAATGTGTAAGTGCCTCAGTTATAGGTTCTTGAGAAGTCAGGGCCATAGGGTTGCTTCAGCTTAGGAACTGAAGCTAAGGGCAGATACTAAGACCCTAATCCAGAAACTTTTGCATGAGGCTATGAAGGGGTTAGCTCTGTGCTGGTGTCCTTATACTGACTGGTATTCATTCAGCATGAAGTCAAGTGATAAAGAATGGAAACCTTTTGGTCTGAAAACACTTCTGGTTGCAATCTCAGCCCCAGTACCTGGCTAACCTTTGCTACAGAGAGGGAAGCATTTCCCTTTCCTTACCAGCCATATATAAAGTGAGAGGCATGGAGGATCTTCTTTCCCCATTCAGTTCAGACAAATGTGAGGGACTAACTAGTTTCTTTCTAGGGATGTCAATTCTAAGTACCACAAGCATTCAAATATGTCACAGTTCCTGCCCTTAAGGTAGAAATGACTCTCCTTGTTCAATCCCTACAAGCACTCTGGCCCACTAGCATATTCAGCAAAAGGAAGAAGATCTAGCCTCCAACTCCAAAACTGTAGGTTGACTGGTAAGGGCTGACTGAGTTCATAGAATAATTAACTCCTGCAGTGATATTCCGTGTGTGCTATGTGCCTGGCACTAAGCTAAACCCTTTACTCACTATATACTTGTTTAATCCTCAAAACTGTTATACAAAGTAAATACTGCTATTTTTCAGATGAAGAAACTGAAGCACAGAAAAATTAAGTGACATGCTCAAGGTCACCCAGCATGTGTTGATAATGTCAATTGAAACCAGGTAGTCTGTAAAACTTGTTCTCTTAACTGTTTTTCACTGAACTGCTAACACCCTGGATTAGCTAAGGATAGCAGCAGGGCAGGAATTAAAGCCCAACAGTGAGAGAGGTCTTGATAGAAGGCAGAAAACCAAGATTACAAATGAAAGTGGAGTAAGATACAGAGCTTTGAGCCCCAATCAGTGGCTTGCAAAGCCCTCCCAGGGCAGTTTGTGTCTTAATCATTTTTGCACCTGGCATAAAGCTGGGCTCATAATCAGCCTCAAAAGACATTATTGAATTGAATGATGGTTGAGTAACATCTTTGTAGAAAGGATTGGTTCATTTGTCATTATCCACAAGGTTCCCAACAGCAATGCTGCTTATCTAGCAGGTGTTGGCAGCCACAAAGGACATGGTTGGTGGGGAGAGAGTATGCTGGAGGAGCTGTCAATATTAGTCTTGGAGTCATATTTGTTTGCAGAGGCTTCCTCAACCCTCCACCAGCCTTAGTTACCGATCCTCATTAAAGGCCCGATGATGTCAAGCTCTTTACAACAGTGCCCAGACAGAATTATGCTCCAAACATCTAATTTACTCTCAGAGGCTGGTCTTTTATGGGTGGCTTTGGATATTGCTTTCAGCCCATCAAGTTGACCTTGTTCCTTTTGCTTTCCTGGTTCCTTTTGTGGGGAGAGCATTGAGTAGACTCACTGAGTAGGCACCGTGAGCAAATGCCTTTTCTAAGCCTACCCTCCTACCCCAAACCGATTTGCCTTGGTTGCTGAAGGAGAGTGCAGAGGTAACACCCCTTGATCACCTCCTACATCCTTGTTGATTCATAGCACCCTTTCCTAGCATCCCAATCACCTGATATTGTTACATTTTGCCTTGTAAATCCCATGTTGGAACTATTGCCAGAGTGAAGCAGAGAGTGGGGGCTATCAGCTCCCCAGCCACAAGTTTCCTAATCTTACTGGAGGGAAGGACTTGGGAAAGGTACGCAGAGGTAGGGTGGGACTGGTGAGGGTTGGGGGGAATAGGCCCTGTATAAAAGCTGAGTAGCCAGATGCTCACTTTCACAGCTCTCCTGTAAGACTGGCAGGGCAGATATAGATTAAAATGAAGCACAAACTCCATTTAAAGTGCATTACAGCCCAGGAATCAGCTCCCCCTGGGCAGGAGAAGGGAGGAAAGGGCACAGGAGGCTACATAAGTCTCTTTCCTTATCTAGCACCACATGTCTCTCTCCTAGCTTTGTGAAGGGTGATTTACACCCTGGCTGGAATGACTCTCTTTCTGAGCTGATTACATTGGCAAATGCCCCCCAGAGGCCACAGCAGGATGGCCATATTCAGAAGCAGCAGCCAATAAATCTCAGAGGTTTATATTGTACTTCTCAGTACCCTCCCTCCTGGCCCTCTGCCAGCTGGGCTGTGGAAGTAGGAGAGGGCTTGGTTGGAGGATTGGGGGAGGACACCCTTCAATACCTTTCATTACCATCTTCCCTAAGTACTGTTTAGTTCTCATTCTTAGAAGCCATTCTGCCTCTGTCTTTATCCGGGGAGCAGGTGGGAACCAGCCCAGTAAATTGATCTAATAAATAACCCTTATCTTTATGGGTAGAAGTCCTGGGTTTCTCCTAGGTATTTGCTCTTGGTAGAGTAGCTTGCTCTCCTAACCCTCCTCTGAAAATGATGAGGCTCCTAAATGATCTCTCCAACCATCTTTCTCAGTGATCTTTCGTCCAAGGAAATCTCCGCAGTTTAGTCTGAGGGAGGTTTGATCCTTCCATTCTTC EMBV3_30649 TGCAAATAGCAAGTATGGTGCTAAAGTCCACACCAATGGAATTAGATGAGTGCTATGCAC Gene BVT0102_026569 + 0 NULL GK000026.2:17293747-17347007 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150229 TCONS_00150232 TCONS_00150237 TCONS_00150231 TCONS_00150238 TCONS_00150228 TCONS_00150230 TCONS_00150235 TCONS_00150234 TCONS_00150239 TCONS_00150236 TCONS_00150233 TCONS_00150240 1 XLOC_091834 Coding TCONS_00150235 XLOC_091834 Coding Coding CCNJ 26:17278510-17296545 j TSS112588 4143 1 TCONS_00150235_2 372 0.0304127443881245 6 0.770599977819674 0.000494917477100919 0.00010295596697608 0.000796056984518537 0.000817454570789148 0.000880430311481933 0.000201804037016775 0.000668165882361687 0.000456391868707832 0.00141987265272863 0.000201382181007039 1.9248828567122e-11 0.000108877969111936 1.70701082038865e-06 0.000680917676341569 0.000467250351105616 1.681735007566e-09 6.71355981996107e-08 0.00158250807513835 0.000462911039867483 0.00108464160440548 0.000351293217411727 0.000532272217462091 0.000113578300358685 1.60294158029783e-08 0.000760558354728657 2.04701718682199e-09 0.000491079455797151 1.90411332207693e-08 1.11243975988609e-05 2.66987738144431e-08 XM_005225548.1 CCNJ PREDICTED: Bos taurus cyclin J (CCNJ), transcript variant X2, mRNA. 0.0 3763 100.00 0.503258508327299 NM_019084.4 CCNJ Homo sapiens cyclin J (CCNJ), transcript variant 2, mRNA. 0.0 3095 87.63 0.608013516775284 TCONS_00150235_2 sp|Q5T5M9|CCNJ_HUMAN CCNJ_HUMAN Cyclin-J; 0.0 725 96.77 0.997311827956989 2 noncoding 1 1 1 1 -0.0716969065729855 0.613472543109715 -0.0687075999443494 0.193014228986015 TGTGCCCCCGCGCTGGCTTTGTACGCGGAGCCGCCTGCCGGTCCTTTAACAATGGGCGGCGCGAGCGCCCTGGCGCTGGGTCGGAGCTGAGGCCGGCGCTTTGCTGCCGACTGTCCGCAGCATGAGCGGGGTCGGCGTTCCCCGCATGTCGGCGGGGCTGGGCCTGTGAGGGCCGCGGTTCCGGACTGAAGTTGCCTCGTCTGGCCAGGCACGCCGCCGGGTCCCATGGAGCTGGAGGCGCAGTGGTGGCGGGGACAGCTGGCTGCCGACATCCATCAAGCTCTTCGGTACAAGGAGCTGAAGTTGCCTTCCTACAAAGGCCAGTCCCCTCAACTAAGTCTCAGAAGATATTTTGCTGACTTGATTGCCATTGTGAGCAATCGTTTCACACTCTGCCCTTCTGCCCGACATCTTGCTGTCTATTTGCTGGACCTGTTTATGGATCGTTATGACATCTCTATCCAGCAGCTGCATTTAGTTGCACTTTCCTGTCTGCTTCTAGCAAGTAAATTTGAAGAAAAAGAAGATAGTGTGCCTAAGCTGGAGCAGCTCAACAGCCTGGGTTGTATGACTAATATGAATCTAGTATTAACAAAACAAAATTTGCTACATATGGAACTATTATTATTGGAAACCTTTCAGTGGAACCTTTGCCTTCCAACAGCTGCCCATTTCATTGAGTATTATCTCTCTGAAGCAGTACATGAAACAGATCTTCATGATGGCTGGCCAATGATGTGCTTGGAAAAAACTAAACTCTACATGGCCAAGTATGCAGATTACTTCCTGGAAGTATCCTTGCAAGTAGCTGCAGCATGTGTGGCTTCTTCAAGGATTATACTTCGTCTCTCTCCAACGTGGCCTACAAGACTGCATCGTCTTACTGCTTACTCCTGGGATTTCTTAGTGCAGTGCATTGAACGGCTATTGATCGCTCATGATAATGATGTGAAAGAAGCAAACAAACAGAGAGGACAGGCAGGACCTCAGCCAGCACAGCTAAGTGTGTTCCAGGCAGCCTCCCAGCCCTCTCGGGCAGTTCACTTTCAGCAGCCTCAGTATCTCCATCAGACTCACCAGACCTCACTGCAGTATCGCCATCCTGTATCGGAACAACCAAGCTGTCAGCAGATTGTATCTACTACACACACCTCATCTTACACACTACCAACATGTCCTGCTGGCTTCCAAACTAGCGTTCAGGGCCTTGGGCATGTGCCAGCTGGTGTTGGGATGTCACTGGCAATACCGGTAGAAGTTAAACCCTGTCTGAATGTTTCTTACAACCGGAGTTACCAGATAAATGAACATTACCCTTGCATTACTCAATGCTTTGAAAGGTGATTTTATGTGAAGGTAAGACCTGACCCAGACTGTTTATGACTTGAAGCTCTGGGGCAAGCTTTTTGTAAAACTTCTCTTCAAAAGGAAAGGGATCCAAATTTCATCAGAACTCTTCAGATACCAGCACCAGGAAGACTGATTATCCCTTCCAACACACCATGAATATCTGGGAGGACTAAGGTAACACTGCAAACACTTTTAACAGTGTATATGTCAAATCCTGTTAAAACAAATTTCTATATGACACATTTTAAAGCCCCAAGTGATGGTCCAAATATTTCAAAAATATTCAACCCAACAGAAAATTTGGACAGACTCCAAATTTGCTGTTTCAAGATTTGACCTGTGGTGGCTCTGGGCCTAATGTTGGCTTATATGTCAGAGATTAATGTTTATCTGTGGACTTGCCAAACATTCTTTTTATGAAGGAAAGTTACAGTATTAATTTTTGAAGAGATCCTTTTTTAAGTCTCCAGTTTTGATTTATATTTTTGATCTGCATCTGCAAATGAACTTCTGACTAAGTTTCAACTCATGAATTTCTTTGCTATACCAGTCAGTGTGGTTAAAAAAATTTTTTTTTAGATATTCTAAATAACTCCTTATCACAGATAGTATAGGTATCTGGATTTATGTACTAAAATTAAGATTGGAGTAGATTTCTTAAAATCATGGTCATACGTTTTTCTTATTTTTCCCCTGTGGTCAACCTCAAGTCTTTAGAATTAAACACATTTAACTCAGGGAATTTGTACTACTTGGAAACACTTAACTGTAATGCAACATGCTTTGGGAATGTTATAGTATGACTACCTTAATAACATAGGTTAGTAGACTCCTGCTAGAGTGTGTTTTCAAATGAGAACATAATTGTAGCTTAGAATGAATGAAGTGGTGGTTCCTGTCATTCATAATACACATACAAGTTTTGCATTTCTCAGTGCAATCAATGATTTATACTCAGATTTGATATTATTCTAAAAAAGTTTTTTCAAGGGAAGGTGTAATTGTAAAATGTCAGTACTAGAATAAAGTCCCGTAAGTTTGTTTTGAGGTGGAATGTGGCCAGGGTAGTTCTCAGGTTGTGCTAGAGCAGCACTTTGTTACATGGAAGACAGGTTTTATAAGCAGCCTTTGAATCCAGCTAGTCAAGTGTAACGGAGAAGGCAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCAGAGTCGGACATGAATGAAGCGACTTAGCAGCAGCAGCAGTTAGGTGTAAGTAGGCAAAGGTGACTTTCATTGGACTGGCCCCAGAACTGCCCTGGGACATTTCACTATATTGGTAATGAGTGAAAACAGCAATAGGTCATTACAGCAAGGGCAATTTGGGGGTAAAGAGTTTGGAGGAAATAAACTGCAAAAAGTAAAAAGAAAAAAAACATTGTAATAACTGAAACTATATACATTGTGCTCTTATCTGTGGGAGAAGAGATTTGGTGGAGGGAAGCTTTCTGATAGAAAAATTAGTAAAGTGTGTCATTTTGTTTGTGTGGTTTTTTTTTAAAGATAGCACTTGAATAGAAGGGAAACTGCATGGCAGGTATGTGACTGCCGTAATATGCATTGAAGACAAGCTTATTATAAAGATGTTATGGGTATGCAGCAGGAGTCTCAATAATCAAGCCAATGGCTTTTGTTAGGAAGGGAAGGGACTCATCACAGCAATGGATTGATCCAGATGGCTCCAGTAGGTGGATGTGGGTGGGTGGGTTCTGTCAGTGTGAGTTCTTACAGAACATCCTTTCCTTAAATGAAAGGTAACTTTTATCATTAGAGTACATAGGGCATGACATGGATTTATTAGTCTGGTAGATAAAATGAAAAACTACTCAGGTAAGAACACTCACTCGTGGCAGATTTTTCAAGCATGAAAATTGTTTTCTGAAAGTATCATCACTTTTCTCTTTACAGAAGGCTGCTTATTGGATTTTAGTAGTCCTTACCTCAAGAGAACTTGAATTATCTGGGGGAAAGTGGGTTCAAAAGAGAATATATCATTCACATTCAGAACCTAGCAACCTGGAGTCCAATTTTCAGTATTTTAACTACCTCAATAATACTATGAATGTAAGATATTGGGATAGAGATCCCAACTTGAAACAACAACTGGTGCCTATGGTAATTTAAATGTCTTGTCAAATGCTTTTACTGATTGGTTTAAATGTCATTCTTGTTATAGAAGAATATGCCTTTTTAAAAAGCCTGTAACACTTTCCCAGTTTATATTTTAAAAAGCTAAAGAACACTGGACTAATTTGGGTTGCAGGGGGGAGAGTAAAATAAATAATTGGTTACTATTGCTGCATACCCAGGGTAGGGTGGGATGGGGTGGTTGGAGAAACCAGTACTATTTTTAAAACATTAGGTTTCAGTATAAATACAACTCACAACTGCTAGCTTTGGGGGGCTATGGGTGGGGGGCGTTGTGTGGGTTTTGTTTTGTTTAATTTATTAATTAGTCTTTAAAGCAGGTTTTTTGTTTTTTGAGATTACCGGACCATCATTAAATGTGTACTGTGAAGAAATTAATGATATGTATAAGGGGCTTTACCAAAGTCCACTAAATAAACACTACTCAAATATAGACTGCAAACCAAAATGTATCTGTTATGACATTAATTGCAAATAGCAAGTATGGTGCTAAAGTCCACACCAATGGAATTAGATGAGTGCTATGCACTTAATTTTAAAATAAAACTAGTTTTCATTAAAGTGGTTTT EMBV3_22016 GACGAGAAACAGAAGCTGATCGAGGAGGTGCACACCCCACGGCCTCGGGGCCCCAGCTGT Variant GeneID:536553|AP2S1:NM_001076078:331_cdna 170^640 1 EMBV3_14018 GeneID:536553 18 GENE AP2S1 MGC140595 adaptor-related protein complex 2, sigma 1 subunit EMBV3_40292 GCATGTCTCCCGACTTCACCGTCTACATGATCAAATACCTCATGACGCTCATCGTGGGCA Gene GeneID:538507|FZD2:XR_083985:7_cdna Constitutive 0 NULL GeneID:538507 19 PSEUDO FZD2 NULL frizzled homolog 2 (Drosophila) EMBV3_22444 CCCAGAACACCGCACTCCGGAGGAAAGTGGAAGTGTTTCTGGAGATTTGGGCTTCGCGAT Variant GeneID:514969|ACOX2:NM_001102015:172_cdna 310^472 1 EMBV3_15594 GeneID:514969 22 GENE ACOX2 MGC159638 acyl-Coenzyme A oxidase 2, branched chain EMBV3_21585 CAGGCCGTTTGTCTGCCTTGGTCCTTAGGAAGCCTCTGATGCGCTTTCAGTTATCATCAA Gene GeneID:522875|NKIRAS1:NM_001075835:5_cdna Constitutive 0 NULL GeneID:522875 27 GENE NKIRAS1 NULL NFKB inhibitor interacting Ras-like 1 EMBV3_18035 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36384 GCTCTCGGGGCTGTGCAGGGCGCATCTCAGCCTCAAATCTTGGCGCAAAAACCAGAGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36176 TCGCTCTCATTGGTGTCTGTGTTTTCATCTTGGCGATAATTGGCATTTTGCATTGGCAGG Gene GeneID:512545|ITFG1:NM_001038532:210_cdna UTR3_Alt 2 NULL GeneID:512545 18 GENE ITFG1 MGC128970 integrin alpha FG-GAP repeat containing 1 EMBV3_02716 CAAAAGCCAGATAAAAGCCGAATGAGGAGGCTGGGGAAAGTGTCCAACGTAGCTGTTCTG Gene BVV0102_145186 + 0 NULL GK000002.2:94941460-95040252 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105919 TCONS_00105920 TCONS_00105916 TCONS_00105921 TCONS_00105915 TCONS_00105922 TCONS_00105925 TCONS_00105917 TCONS_00105924 TCONS_00105918 1 XLOC_062671 Coding TCONS_00105925 XLOC_062671 Coding Coding GPR1 2:94939939-94985575 = TSS78045 1848 1 TCONS_00105925_4 355 2 0.959548592089405 0.00159563126312521 0.000884087796929273 0.000149299602507658 0.00147382576099947 0.000354201801622746 0.000145005543169373 5.69787408976196e-05 0.0012451658213166 0.000243894482859139 0 0 9.67428940261487e-06 4.65776543963159e-06 0 2.8008641353729e-05 5.52205717058121e-62 1.91141648755803e-05 9.59602509311346e-05 0.0007012410721201 0.00021063099218341 5.77138125635734e-13 4.81857413552571e-05 4.48649988645894e-15 2.47978318808912e-05 0.00106794647014299 7.97786922942038e-06 0.000440309767747481 1.82842282151282e-07 0 0 NM_001206545.1 GPR1 Bos taurus G protein-coupled receptor 1 (GPR1), mRNA. 0.0 3333 100.00 0.999458874458874 NM_001261452.1 GPR1 Homo sapiens G protein-coupled receptor 1 (GPR1), transcript 0.0 1519 84.91 0.728354978354978 TCONS_00105925_4 sp|P46091|GPR1_HUMAN GPR1_HUMAN G-protein coupled receptor 1; 0.0 610 87.89 0.997183098591549 1 coding 0 1 0 1 0.0859784141605677 0.454354013677758 0.0568160248224201 0.296569923996864 TGATACACATGTGTCCATGCTGAGCAGAAGAATTAATCTGTGCAGTGTGTTCACTGCTTACTTTTCTCCTGGAATACATGATGAATTTTTATGGAGGGTAGAGGAGGAAGGGAAAAACCACATTCAAGCGAAACCCTACATCATTCTCCTCTACAGTGTCATTTCAAAAGCCAGATAAAAGCCGAATGAGGAGGCTGGGGAAAGTGTCCAACGTAGCTGTTCTGAAAACCACTCTCCATTTCATTCTGGAGCAGGGAAGTTACACCCAGACATCACAAAAGCTTCTCTCTTCACAGAAAATTAACTGATTTGTTCATTGTGCAAGATCATGGAAGATCTAGAGGAGACATTATTTGAAGACTTTGAGAACTACTCGTATGCCCTGGAATATTACTCCCCAGAGACCGATTCAGAGGAGAAAGCACCCCTGGGAGCCATTCACTGGGTCTCCTTGGTGTTGTGCTGTTTGGCATTTGTCCTGGGCATTCCAGGAAATGCCACTGTCATTTGGTTCACAGGATTCAAGTGGAAGAAGACAGTCACCACTCTCTGGTTCCTCAATCTAGCCATCGCGGATTTCATTTTTCTTCTCTTCCTACCTCTGTACATCTCCTATGTGGCCATGAATTTTCACTGGCCCTTCGGCATCTGGTTGTGCAAAGCCAATTCCTTCATTGCCCAGTTGAACATGTTTGCCAGTGTCTTCTTCCTGATGGTGATAAGCCTGGACCGCTATATCTACTTGATCCACCCGGTCTTATCTCATCGGTACCGTACCCTCAGGAACTCTCTGATTGTTATTATAGTTGTTTGGCTTTTGGCTTCACTAATGGGTGGGCCAGCTCTGTACTTCCGGGACACTCTGGAGTTGAATAACCACACTCTTTGCTATAACAACTTCCATGAGCATGATGTGGACCTCAGGTTGTTGAGGCATCATGTTCTGACCTGGGTGAAAGTTATTGTTGGGTACCTCCTCCCTCTGCTAACAATGAGCATTTGCTACTTGTGCCTCATCTTCAAGGTGAAGAAGCGAAGCATCCTGATCTCCAGTAAGCACTTCTGGACCATCCTGGCTGTGGTCATGGCCTTTCTGATTTGCTGGACTCCTTATCACCTGTTTAGCATTTGGGAACTCACGATTCACCACAATAGCTATTTCCACCAAGTGCTACAGGCTAGCATCCCCCTCTCCACTGGCCTGGCGTTCCTCAATAGTTGCTTGAACCCCATCCTTTACGTCCTGATTAGTAAGAAGTTCCAAGCGCGCTTCCGGGCCTCAGTGGCTGAGATACTAAAATACACGCTGTGGGAGGTGAGCTGCTCAGGCACCCTGAGTGAACAGCTCAGGAACTCTGAAACCAAGAATCTGAGTCTCCTGGAAACAGCCCAGTGAATTCTTGCCCTCCCACCCATCAGCACACGACTTTTGTGTGGTTCCCCTGACATGCTTTTAGATTATTTGGTTCCAAGACATACAGCTGATTGTATCTTTTTATTTTTTTGGTAATTTTATTGGCATCCTATTTTTCTTTAGATATAAAATATAAGAAGGATCTTCATTTTTCTTTTCAGCAACCTAAATTATCTTATTCTTGCTAATTATACCATAGTGGATTAACCAACACTACTTTTATAACTTTAAGGACTTTTTAAAACTTCTAAATTTTAATATTAAATGTATGATTGATTTAAAAAATATAAAAATAGGCATGCTTAAGCTACTTTAATTCTGCACAAGTAACCTATTAGACTTATTCTTAAAATGCAACATATGTACTTAATTTCCTTATTTCATGTAATCTGTATATGTGCCTTTATGAATTAAAGTGATAGTTGATTATAGTA EMBV3_18261 TTCTGGATACCTTAAGCAGTGCTAATCTCATGGGTCTCCAAAGCTCGTAGCCAGGCCCCT Gene BVT0102_145942 + 0 NULL GK000010.2:7788322-7879495 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00241 CCTGAGCATGAGGGTTAGGATTTATTTTTCTTCCAGTGGCTTAATTTCCTCAAGTGGCAG Gene BVT0102_193649 + 0 NULL GK000024.2:46034228-46047184 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140391 TCONS_00140394 TCONS_00140397 TCONS_00140398 TCONS_00140400 TCONS_00140390 TCONS_00140395 TCONS_00140396 TCONS_00140392 TCONS_00140389 TCONS_00140399 TCONS_00140393 1 XLOC_085119 Coding TCONS_00140390 XLOC_085119 Coding Coding LOC529859 24:46042498-46135545 j TSS104799 9888 1 TCONS_00140390_5 1684 0.0558252427184466 31 0.894063151559444 0.000237687749148508 0.000108836611757687 8.96982599180695e-12 1.8359450773694e-05 7.30077532259071e-05 2.26686363826416e-10 4.00027898861706e-38 0.000256561710844341 4.14462119447493e-05 0.000742147188665336 0.00026430809680034 8.32450644707207e-05 4.03581703037431e-05 6.28706021100379e-05 8.74034650009892e-05 0.00148507373043476 1.38084135257862e-08 0.00166013213951482 0.00020415960503233 0.000797733966701913 5.55370765192555e-05 0.00245045835662446 0.00176390686811461 0.00115135711742272 9.17635729984114e-140 0.000404711060824473 8.74145651047235e-05 0.000406851962040661 0.000715716907995581 0.001169943802821 XM_003583979.2 EPG5 PREDICTED: Bos taurus ectopic P-granules autophagy protein 5 homolog (C. elegans) (EPG5), mRNA. 0.0 1.750e+04 99.97 0.982301779935275 NM_020964.2 EPG5 Homo sapiens ectopic P-granules autophagy protein 5 homolog (C. elegans) (EPG5), mRNA. 0.0 7701 83.26 0.738268608414239 TCONS_00140390_5 sp|Q9HCE0|EPG5_HUMAN EPG5_HUMAN Ectopic P granules protein 5 homolog; 0.0 3185 92.40 0.991686460807601 0 coding 0 0 1 1 -0.076926100884997 0.593963916978434 -0.000434892869304648 0.99559290857055 TCCACCTTTGCCTTCTCTGACTTGTAAACAGAAGCCCCCACCCTCCTCTCCCAGAGAGCTGCATGCAGAGTCCAGTCCTCAGCGTCTCCTTGCTCTTTTCTTAGTGTTTGGAAAGTCCTCTTCTCTGAGAGGATTAAGGAATGTGTTATGTCAGATGCAAAGGAAGATTGGGTGGGAGAATTGGTGTCTCTTCATCTGGATCAAGCAGTCCATGCTGAAATCGCTTTAATGATTCTTGAAGCATACCAGAAGTATCTCGCACAGAAACCATATGCTGGGCTTCTTTCTGAAAGTATGAAGCAGGTTTCATATTTGGCCAGTATCGTTCGATATGGAGAGACACCTGAGACCTCATTTAACCAGTGGGCCTGGAACTTGATTTTGAGGTTAAAACTGCACAAAAATGATTATGGAATACAGCAGAATTGTGCAGCTGTTCCCTTCTCCAGCACTGTGCCAGAAATGACAGAGTCACCCACGTTTCATCCTCTCTTGAAGGCTGTGAAGGCGGGCATGCCCATTGGCTGTTATCTGGCCTTAGCTATGACGGCTGTGGGCCACAGCATTGAGAAGTTCTGTGCAGAAGGCATCCCACTCTTGGGAATTCTGGTCCAGTCGAGGCATTTGAGAACAGTGGTCCATGTCCTGGATAAGATTCTGCCTTTGTTCTACCCTTGCCAGTATTACCTTCTAAAGAATGAGCAGTTTCTGTCGCACCTCCTCCTGTTCCTGCACTTGGACAGCGGTGTCCCCCAGGGTGTCACGCAGCAGGTCACCCACAAGGTGGCGCAGCACCTGACAGGGGCCAGCCACGGGGACAATGTGAAGCTTCTCAACAGCATGATTCAGGCCCACATTTCTGTAAGCACTCAGCCCAATGAGGTGGGCCCGGTAGCTGTATTGGAGTTCTGGGTTCAGGCTCTCATAAGCCAACATCTTTGGTACCGGGAACAACCCATCCTCTTCCTCATGGACCATTTGTGTAAAACAGCTTTTCAGTTGAGGCAAGAAGACTGTGTGCAGAAATTGCTCTACCAGCAACATAAGAATGCCTTGGGCTACCACTGTGACCGGAGTCTGCTCTCCTCTTTGGTGAGCTGGATCCTGGCAGGCAACATCACTCCTTCCTTTGTGGAGGGCTTGGCCACGCCCACTCAGGTCTGGTTTGCATGGACAGTCCTGAACATGGAATCCATCTTTGAAGAGGACTCCCAACTCCGAAGAGTTGTTGAAGGGGAATTGGTTATAAACTCTGCATTTACCCCCGACCAAGCTCTGAAGAAAGCCCAGGCTCAGCTGAAGCTCCCCATCGTCCCGTCCCTCCAGAGGCTGCTGATCTATCGCTGGGCCCAGCAGGCTCTCCTCACGCCTTCTGACCATCCTCTTCTGCCACTCATTTGGCAGAAGTTCTTCCTCCTGTATCTCCACCGCCCAGGACCGCAGTATGGGTTACCTATAGATGGTTGTATTGGAAGGAGGTTTTTTCAAAGCCCTGCACATATCAGTTTGTTGAAAGAAATGAAGAGGCGCCTGACAGAGGTGGCCGACTTCCACCACGCTGCAAGCAAGGCCCTCCGCGTTCCAGCAGAGGGCAGTGAAGGGCCGCCAGAGAGCCGGGCTGGCGCCCTTGCTTACCTGACTTCACCAGAACTGCACACAGAGCTTGTGAGGCTCTTCAATGTGTATATATTATGGCTAGAAGATGAAAATTTTCAGAAAGGAGATACCTATATCCCTTCTCTGCCAAAGCACTATGACATTCACCGGCTAGCAAAAGTGATGCAGAATCAGCAGGACCTGTGGATGGAGTATTTGAACATGGAGCGCGTCCATTACGAGTTTCAGGAAACCGTTGGTCTGTGGACACAGGCCAAGCTTGAGTCCCATTCTGCACCCTGCAGTTCATCAGTTCAGCTGGACTTCACTGATCCTTTGTTGGCTAAAGAAAGAGTTTTAAGTAACCTGCGGAAGCATGAGGACCCCCGGCCTCCTCTTGTTCTGCACCTGATGAGGCCTCCTGTGCCAGTTATCTCCTCAGCCATGCTCCTGAGTCAGAAGGATGCCACCGAGCTGGTGCGCACAGACCTGAATCTGCTGCAACAGCAGGCGAGAACTGCAGCTCTTCGGGAATCTCAGCAGGTTGCGCTGGATAGTGAACTGTTGGACACAATGCCCAAGCAGTATGTTAATCGAGAAGAACAGACCACACTACATTTGGAGTGCAGAGGCAGTAGTGGTAAAAAGTGCCAAGGAGCAGCAGTTGTAACAGTTCAATTTGAAGGTATGCATAAGAATGAAGCAATAAGCCAACAGCTTCATGTTTTGCGAAAAGAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAAACCACCATCACTTAATATTGTGGAGGCCGCTGTGCATGCTGAAAACTTGATTACGGCCCTAGTGAATGCCTACCAGTCGCAGCCCACCCCTGGGGTTCAGAAGGTTGGCATCAGCCTCTTCTTTACTGTTGTGGATTATGTCAGTGATGAGACCCAGCGTCATCCTCCCACAAGGCAGTTCTTTACTTCATGCGTTGAGATCTTGGGACAGGTATTTATCAGTGGCACTAAATCAGAATGCAGAAAAGTCCTTGAGACCATTCTGAAGAACAGAAGGCTTTGCTCCCTCTTGTCTCCTTTCTTCACTCCCAGTGCTGCGCCCGCGGAGTTCATCCAGCTCTATGAGAAGGTGGTGAAGTTTCTGCGCGAGGACAACAGTGATATGATTTTCATGCTGCTGACCAAGTTCGATCTTAAGCAATGGTTAAACTCCACTAAACCTCCTCTGTCTGATCGTACCAGGCTTCTGGAGTCCATTCATTTGGCACTTACTGCCTGGGGCCTTGAACCAGATGAAGATATTTTGATGCCATTTAATCTTTTCTGTAAGCACTGGACTTACCTTCTTCTCTACCAGTTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTGATGCAAAGCTCTGCTGAACAGCTGCTAAGCCCCGAGTGTTGGAAAGCCACCCTGAGAGCCCTGGGCTGCTGCACCCCAGGCTGCCAGCAGGGGGCAGCTTCTGTGGAGAGCACGGTGCTTCAAAGTTCTCCTGATGTGCTCTTGTCCGACAAGCAGGTAATGGAGACTATACAGTGGCTGTCAAACTTTTTTTATAAGCTTCGGTTGTCCACATTGGACTTTAAAAGTTTTGGTTTATTCTCAAAATGGAGTCCTTACATGGCAGACATGAAGACATTCTTGGGCTATCTTGTAAAAAGGCTGCTTGACTCAGAAATGGCCTGCTTGGCCCAAGACCCATCTGCCAGCAGCAAAACAGTGCTAAGATCCCTACATTCAGTAATCATCCAGCTCTTTAAGCCATGGATACTGGTTTTAGAAGACAATGAAAGCAGCCAGCGACATTACCCCTGGTTGGAGAGTGATGCTGTGGTGGCCTCAAGCATTGTGCAGGTGTTCACTGACTGCATTGACTCATTGCACGGGTGTTTTAAAGATAAGCTCTTGCCTGGTGATGAAGGAGCCCTTCGGTTACATTTGATGCATTACTGTGAAGCATGTACAGCGCCCAAAATGCCAGAGTTCATTCTGTATGCTTTTCACAGTGCCTACCAGAAACTTCCATGGCGGGACCTGCATCCTGACCAGATGCTCATGGAGGCCTTCTTCAAGGTGGAGCGAGGAAGCCCCAAGAGCTGCTTCTTGTTTTTGGGGTCTGTTCTCTGTGAAGTCAACTGGGTCAGCGTGCTCTCTGATGCCTGGAGTCCCAGTCCCCGCCCAGAGACCCGGGGCATGGTTGTCTGCCTCCTTTTCATGATGATTTTATTGGGAAAGGAAGATCAATTGGTGGACCAAACAGATTCTCCTCTACTTACTCTGCTTGGACAGACAAGCTCACTGTCGTGGCATCTTGTGGATATTGTGTCATATCAGAGTGTGCTGGGTTATTTCAGCAGCCATTACCAGCCGTCTGTCATCCTGGCAAAGGAATCTTCTGCTGAATTAATTGTGAAGCTCTTGAAAGTGTCTGCAGGCCTTTCTGTTCCTACTGACAGCCAGAAACATCTTGATGCAGTTCCAAAATGCCAAGCCTTCACTCATCAGATGGTTCAGTTCCTCAGCTCCCTGGAACAAAATGGAAAAATCACCTTAGCAGTCCTTGAACAGGAAATGTCTAAGCTCTTGGATGATATCATCGTTTTTAACCCACCTGACCTGGACAGCCAGACCCGCCACATGGCCCTCAGCAGCCTCTTCATGGAAGTCCTGATGATGATGAACAGTGCGACTGTCCCAACGGCAGAGTTCCTCCGAGGCAGTATCCGGACCTGGATTGGGCAAAAAGTGCACGGGCTGGTGGTGCTGCCTCTGTTAACAGCCGCCTGCCAGAGCCTGGCTTCTGTCCGCCACATGGCCGAGACGACGGAAGCCTGCATCACTGCTTACTTCAAAGAGGGCTCCCTCAAACAGAATCTAGGATGGGGCCCCATTCTGGTGTCCCTTCAGGTTCCCGAGCTCACCATTGAAGAGTTTCTGCAGGAGTGCCTGTCCCTTGGCAGCTACTTGACTCTCTACGTCTACTTGCTTCAATGCCTAAATAGCGAGCAGACGCTAAGGAACGAAATGAAAGTGCTGCTTCTCTTAAGCAAGTGGTTGGAACAGGTATATCCGAGCTCTATGCAGGAAGAAGCAAAGCTGTTTCTGTGGTGGCACCAAGTCCTGCAGCTGTCTCTGGTTCAGACGGAGCAGAATGACTCGGTCTTGACAGAGTCTGTCATTCGAATCCTGCTTATGCTTCAAGGCCGGCAGAACCTGTTGGCTGAGGAGAGGCTCAGCTCAGGGATTCTCGGGGCAATTGGGCTGGGCCGGAAGTCACCCTTGTCCAACAGGTTCCGAGTGGCTGCCCGAAGCATGGCTGCCTTCCTTTCAGTTCAAGTTCCTGCCGAGGATCAGATCCGCTTGAAGCCCAGCTCTGAGTTATATCTGAGCATGAAAGCTCAGCAGGCTCTGAATGCTCTTGAATCCTTGACATCGAGTAAGCAGTATGTTGAATACCAGGATCAGATTTCTCAGGCTGCACAATTTATAAAGCATCCTGGCCATTGCCTCCAGGATGGGAAAAGCTTCCTGGCTCTTCTTGTGAACTGTCTGTATCCAGAAGTGCATTATTTGGACAACATCCGATAGTAACTCAGAGGCTCTCGATAAACCTGTTGCTATTTATGTTTACATTTAACTTTGCTGTTGCACAGGTAACTTGGCTCAGTTTCACCTGCCGTTTGGCCAATGAGTTAGCTGACCATAGATGCAGGTTGGTGAGTGAGCACTAGATAATTCTGTTGTGCATGTGCACATATGTATGTGTGTGTTTCCTTAGCTCTTAGAACGTTCCAGGGACTCTGTATTACTTGTATTCATCCAACAAGAGAAACTTACTAAGTTCTACTGGGTAGAGAACCACTCACGATTCCTGAATACCCGTCATCTCATGAGACCCCAGGATGGGGTGCTTTTGTGTGTCGCCACTTCTCTTCTCCTCTCTGATTTAAATGTCAAGACTCCTGCGCCAGATCTCACTGCTTGGGGAATCATGTTGAACCCTCACTTTTGAACCCCGGTTGTGTTCCTTCAAAGTACAAAAGCTCTGAAAATGTATGCATTTCTCAAAGAAGGGGGAGGTACTCCCCACAGCTTAAAATATTTCTCTCAGAAGGGAGATAAGAATGCTGAATCAAAGTCCCTGTCTCAGATGTGACCACTTGATCCTGGTTGAAGCGGACAGCAGAGGTGGTGACACGTCCACTTCCGTCCAGCCATGTGTCCTCATGGAGAAGCCATTTGCTCTAAATCGGGGGTGTGTGCTGGCAGTTGTGGGAAGCAAGTCATGCACAGGTGTGTTTTGTTTGATCCCCGTGGCTGAGCGTGTAGGCAGGGCTTCCTCTCTGCAGTTCAGTGTAGATGTACGATCCCTTTGGTCCTACCCTGGCCCACTCCTTCATTCACATCACTCACTTGGTCCCTGTAGACATGTCATGTGCAACTCTTTCCAGACCCCAAGTTTGATGTCTAAAGGTCCTGCTGTTGAGAGAGACAGAAACAGAGACCTCAATTCTCTGTTCCCTGCCTGTTTATCCACTCCAGATTTAAACTCAAACGAAGCTGGCAAACCTGCTGAGACACTGCTGGTCAGTGGAAACCGGGTCAGGTCAGGAGACTTAATTGAAATTTGGCATTTTTTAAATCGGCATGTGCCTGCTGTTGTTAACAGTTCCTTCGTCACCGAAGCTTGTCTACAGACGGCATTGCCTCATGTTACTGCCATCTTCTTTCTCTTGTCGTATTGCCCCCTCACCCCACCCTGGAATTAACATTTTGACTTCTGTCATCATAGTCCTAATTCTGTTGGCTCAAAATTGATTTTGTTTGTCCAGCCGGCATACCATGCCTTGTTTCCGGGTTATCTATAGCCTGAGAATATTTACCTAAAAAACGTGTTAATCACTGAGAACTTTTACCAGTGGGATGGGTTAAGCTAGTGATAATCTCTTCCAAGTATCAATTTGGGGTGCCTCCCCCAACAGTCAGAAGTGTGTAGGAGCTGTTCTTTATTTTGAATCTCTAGTTGAACAGAACAGTTCTGCCCCTCAGACATGCTCTGGTAAAGACCATCCCTGTTACCCTTCAAGTCCTGTGGGCCACCAAGTACCCATCTCCGAGGGACGCATCTCAGAGCTTTCCTTGTGACAAATTTTAGAAGCTGTGGGCTGCTCCATGGCTGATTTGGCAACAAAGATTTTTATGACAGGAAATGTTCTGTGTGCTGCTTTCTTTGAGGAAGATGTAATTACTGATATCCTAGAATGTGAAAATTTTGAGTGACAGTACATATGTTCAAAGAAAATTGTGTTTAATCTCAATTTTTGAAGATTTATAATATTTATAATGTATTTGCTCTGTAAAAATTATTAAAAAATAAATCAATCTTTGGTTGTAGCTGGTAAGAATTTGATTTTTAGGGACATCACACTATCTTGTAAAGTATTTCAGTTGTTAAAGTTGATGAAGATTTTTTTATGCCTGATTTCATCTATTTTCTTGGATACCAACTGGATTATCAGAGATGATTGGTAAAAGTCCTTCCTCTTTATGCTTCATAGTGGAAGGTTTACTCACACATAGGTTCCTCTGAGAGGCTCTGGGCTAAGAAATGACTGTAACGACACTGAGACAGATCAAAAGGTGGCTACGTTGTTGTAGCCTCCTGGGAAAGAAGAGACCAGTCTGCCCACTGGCTTTCAGGAATAATGAGCCTTTGTCGGCAAAATAGTCACCTCCAGAGAGTGCGGGGCCAGTTCCAGAGACAGCGGCGCTGCGTATTGACACCGAGTCAGTAAGACCAAGGAACTGCCTGGCCGAGCGGTGTTGAAGGTGAACAGCACAGACGTTCCCCGCACGTGGCCAGCAGTGGCATCTGGTTCAGGCTGGGATGCCTGGCAGCTTCTGGGCTTGCTGAAAAGCACCTCTTGTGCTTCTCCACCTGCCTCTCTGAAGTTCCCATGGGGTGGGCCAGAGAGGCACACTGCACCCCAAGATCTCCTGGCTCCCCCAGCTCACTCTGCAGAAAATGGGATGCACAGACGCCAAGGGAGGTCGGTCCTGCGGACGCATCTGCTCGGCCTGGCGGCACCCGGACCACCCTCCATGTTCCTCAAGCTCCTGGTTCAGAGTTTGACCACCAGTCTGTTGGCCCGGTCACGTCTGCCTCCTTGGGTTGCCTGAGTCTCTCAGTTCTTTGAGGTGGGGGAAGCCGAGTCCAGAAAGCAGGAACCCCACAGCAGCCCGGCCTCTAACCGAGTGCCAACCCGCTTCCTTCCTTGCAGTGTGTCCACATCATACCAGTAGAGTGTCTGCGTCCTTTTTTTCCTTTTGAGTGAAGGTGAGACACAGTTTTCTATTGGATTTTTAAACCTAAAATTAATTTCTGGAGCAGGAAGCAGATGTTATAGAATCATGACCTTTGAGGTCAGCAGGGGCATTGAAGCTCATCTGGCCCCACCTCTCAGCCAGGATCCCAGGCTTGGTCCTCCAGCCTCCCCCTCACCCCTTCCTGTGGTCACTAGTCCTGCCCCTCATAGACAAGCCCAGGTGACCATTGGCAGCCTCTCTTTGTAGCTCTGCTTTATACTGGGCTGAAACTGGCCTCCTGGTGACACTGGTTATGGTTCTGCTGGAGCTATTCTCCTGCCTCTTTACAACAGATAGTCCTTCAGACCTTTGGACAGTTTCATAGCTCATCAGCCCTCTGACCCTGCCCGTCTGCCCACACCTCAGGCTTCTACACTTGATCTTAGCCAAAAGGCTGAGAAGCGATTCTCAGGCTTCTTCAGGCTAAATGCCTAGTGCCTTTAGTTAGTCCTCTTCCCTTCAGTGTCTGCCAGGGCTGCCCTTCAGAAAGCGACCCAAATTAGCCCATGTTACTAGCAAGGGGCCATGCCTGGGAATACAGGAGCTCAGGTGGCGCTAGTGGTAAAGAGCCTGCCTGCCAGTGCAGGAGATGTAAGAGACAGTGGTTCATTCCCTGGGTTCGGAGATCCCCTGGAGGAGGAAATGGCAACCCACTCCAGCCTTCTTGCCTGGAGAATTCCATGGACAGAGGAGCCTGGAGGGCTACAGTCCATGGGGTCACAAGAAGTCAGACACGACTGAGTGACTGAGCACACATACCCAGGAATAGCAGGGGCAGGACTCAGGTGAGACAAATGAGGTGCCCAGAGCACATGCATAATCTGGCACCACATGCATAAGCTGGCACCACCTGCAGGAGTGTGTGCCACCTCAGGCTTTGTGCCCTCAGACTAGCGTCTGCCTTGGGGGTTGGCCTAACACCAGTGTGGGTCCAGCAGCAGCGCTCGCTCCCCTGGACATGTGGGCAGCATTGGCTCAGCAGCTGTGCCCTCTGGTTGGCACATTCAATCGTCGCTGAGTCAAGCTCCAGAGCTTGGTTTATCATCAGTTGCTGCTGAAGACTGGTCTCATCACCGGCCTGCATGATACGTCTGACAATAAGGTGCTTTGCACTTACCCTTCAAAACTATCTCCCACATTTTGGACTGTTACAGCTTACTTTGAGATAACTATTAATATAATTTAAATTTGAACTGAAAACTATTCTGCTCAGTTAATTTTGTCTTATTAAGCAAAATGGAGAGTATAATGGGCAAAGTAAGTGTGTTGCTTAAAAAAGAAGAAGTCTCCTCCTGTGATCCTCCGTTTGTATCTGGGAGGTTCTGGATAAAGTTCTTGGCTTCCAGCCAGGTGCTAATACCGACCTTGTTCTGGTCTGTGATGATCCTGGTCCGTGCTGACTGACCCTCTGCATGATAGATGCATCGTGTGTCCTGTGGAGGCTGTGCTTGATGCTTCCTTCAGTCTAGATAGGGTTTCCCTGGTGACTCAGTGGTAAATAATCGGTTTGATTTCTGGTAACAATAACTTGAAAAAATAAAACTACTGACTATTTTGGGATAATGAAACCACTAAGGAATGTTTTTCATTAAAACTTTTATTTTTTAATGTACATATGTAATATCTCCTGAGCATGAGGGTTAGGATTTATTTTTCTTCCAGTGGCTTAATTTCCTCAAGTGGCAGCAAATACTTCTTAAGTGTGCTCAACTTTTTTCCTTCCCACATGCCTAGTGTGTCCTTGAAAAATCACAGCTTATTTTGGTCATTAAATGTATAATATTTACTTATTGTTGACATTTTACATGCTTGTACAAAGGATGAGTTTTTTTTCTTATATAATGATGAGACATGAAATGAGAACTGGTTAAGTATAATTCTGCAAATAAATGATTCAAATTTAATTTA EMBV3_31466 TCTGGAGGTCCCAAATGTGGTGATGCCAAGAAACCTGGAATCTACATCCTACTAACCCGG Gene GeneID:528871|GZMK:XM_002696331:19_cdna Constitutive 0 NULL GeneID:528871 20 GENE GZMK NULL granzyme K (granzyme 3; tryptase II) EMBV3_37370 ACTGGCCACTGCTGACGACTTCCTTGTCTTCCTGCACAAGGACCTCCCTGGGGAGCTGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15525 GAGTGTGTGCCTCTGGGTTGTCCGAGAGTGAGAAGTTGTCCCAGACTGAAAAAAGCTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20022 AGCACTGCCTTACTGGGTCCCTCGCTCCTTGAGACCCCAAAATCAGATCCAAAAGATGGT Gene GeneID:100140115|LOC100140115:XM_002694852:784_cdna Constitutive 0 NULL GeneID:100140115 18 GENE LOC100140115 NULL hypothetical protein LOC100140115 EMBV3_12680 TGGTGCTTTGATGAAAAGGTCAGTTGGCTGGTTCTCTCTCGAAAAGCTTATTTAGCCCCC Gene GeneID:100124519|NKRF:NM_001102553:2_cdna UTR3_Alt 1 NULL GeneID:100124519 X GENE NKRF MGC137773 NFKB repressing factor EMBV3_15160 CTCTGAACTGCTCCCTCAGTAGCGTCATAACTCTCTCCTGATCCTTTGCTTTCCACCATA Variant GeneID:616187|RNF5:NM_001105445:198_cdna 789^837 2 EMBV3_29009 GeneID:616187 23 GENE RNF5 MGC140459 ring finger protein 5 EMBV3_09750 GTGTGAATCTTCTTTCTCAGATTAATGCAAAACCAGTTCCTAAGGCTTAATGCCAAAAGG Gene BVV0102_031382 + 0 NULL GK000008.2:93338437-94190990 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24435 GACACTTGTTGTCCAGTTGAAAAAAGATTGTGTAGTGTCATGTATATACCTTTTTGTGTC Gene GeneID:540786|PTEN:XM_002698370:158_cdna Constitutive 2 NULL GeneID:540786 26 GENE PTEN NULL phosphatase and tensin homolog EMBV3_19229 ACTTGCTTAGCTCATGGTCAGTTCTCGAGAACTGGGGCTCTTTTATATGCTGCTCGTGGC Gene GeneID:505877|OCIAD2:NM_001034258:92_cdna Constitutive 0 NULL GeneID:505877 6 GENE OCIAD2 MGC127268 OCIA domain containing 2 EMBV3_06682 CTGAGTCAGGGCTACTCCTATCAGGACATTCAGAAAGCCTTGGTCATTGCCCACAACAAC Gene GeneID:527418|CBL:XM_002693082:424_cdna Constitutive 0 NULL GeneID:527418 15 GENE CBL NULL Cas-Br-M (murine) ecotropic retroviral transforming sequence EMBV3_18748 GACGGATACATCCCCATTCTTGGCAACAAGGGAAAAGTCCCACTCGTGGTTGAGCACAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06944 TGAACGTGGCTCTGGTGGCGCTGGTGTTGCTAGGGATGCCTCCAGAGGACTGGCAACATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16610 TCATGACTTCCCTGCGCAACTGGTACCGAGGAGACAACCCCAACAAACCCATGAACCCAC Gene GeneID:282476|SLC25A1:NM_174656:25_cdna Constitutive 1 NULL GeneID:282476 17 GENE SLC25A1 NULL solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 EMBV3_26610 TTGTGATGTCACAGCCTTTTGACTTTGAGGACCTCTGCGATGGTCTAGAGAGTTTCTCTC Gene GeneID:785352|LOC785352:XM_002684007:2_cdna Constitutive 0 NULL GeneID:785352 Un GENE LOC785352 NULL similar to Heat shock transcription factor, Y linked 2 EMBV3_40358 GAGGACGCCTGGATGGGCACGCACCCTAAGGTAAAAGCTGGCATGAAGTAAACTGTGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28292 AGTCGTCCTACATTAACGGGTTGTGTCTAGTTGAAATGAGTCATCATCTGGTCCTGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35845 TTTTATAGTAGCAGTATCCACCATGAAGTGTGTCCACCACGAGCCACGTGTCCTGGATGC Gene GeneID:280924|SCD:NM_173959:18_cdna Constitutive 0 NULL GeneID:280924 26 GENE SCD MGC137456 SCD1 stearoyl-CoA desaturase (delta-9-desaturase) EMBV3_12051 TGGTCCTGCCATGGGGCCAGAAGGAGCTGCAAATATGGGAACTCCAATGATGCCAGATAA Gene GeneID:506696|PSPC1:NM_001075277:20_cdna Constitutive 0 NULL GeneID:506696 12 GENE PSPC1 MGC139047 paraspeckle component 1 EMBV3_31385 AGAAGAAAAAGCTGTGCTTCAAAGAGAACGTTCAACAGACTCTTCTGGAGAAATAAAGAC Variant GeneID:509230|CD99:XM_002700435:20_cdna 561^614 2 EMBV3_33387 GeneID:509230 X GENE CD99 NULL CD99 molecule EMBV3_19804 GACTTGTGGTCATCCCACTGCAGACCAGGAAAGAGGGTCACAAGACCCAGCCCCCGTGGA Gene BVT0102_414373 + 0 NULL GK000014.2:76926208-77277881 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053936 1 XLOC_031861 Coding TCONS_00053936 XLOC_031861 Coding Coding SLC2A5 14:77276917-77306096 j TSS39681 1684 1 TCONS_00053936_1 233 0.0783847980997625 5 0.942456645417781 0 0 0 0 0 0 0 0 0 2.36238902590338e-18 7.33543001339035e-23 6.29957109249727e-30 6.18857412119388e-18 0 3.06311894897521e-14 0.00181424796612304 8.9417763745064e-05 0.00013717480778411 0 0 0 0.00109628225782206 0.000268048328354491 0.00142834118895962 0 0 0 3.91095180040944e-05 2.10150536157938e-12 1.10534359829858e-05 NM_001101042.2 SLC2A5 Bos taurus solute carrier family 2 (facilitated glucose/fructose transporter), member 5 (SLC2A5), mRNA. 0.0 975 100.00 0.320071258907363 NM_001135585.1 SLC2A5 Homo sapiens solute carrier family 2 (facilitated glucose/fructose transporter), member 5 (SLC2A5), transcript variant 2, mRNA. 2e-164 583 83.70 0.326603325415677 TCONS_00053936_1 sp|P58353|GTR5_BOVIN GTR5_BOVIN Solute carrier family 2, facilitated glucose transporter member 5; 8e-123 362 100.00 0.768240343347639 2 coding 0 0 0 0 -0.0293713377735151 0.833861452709385 0.00841068895471836 0.885430921795559 TGAGTGGGGCTGTGTTCCCTCCCTGTTGTTTGATCTGAGACCAAACTATGGTGGAGATGATGAAGATAACGGTGACCTCAGTCAAAAGGTCCCATGCACGCACTGCTACACTCAGAGCCCCTGATCCTGCAGCAGGCCCCTGCCAACACATGGCTTCGTCGAAGACTCCTGGACACTCACAGAGGCTGACACCCGTGATTGTTCTGGCGACACTGATAGCTGCCTTTGGGTCGTCCTTCCAGTATGGGTACAACGTGGCTGCTATTAACTCCCCTTCAGAGTTCATGAAAGACTTCTACAACTATACCTACTATGACAGAGTCGGTGAATACATGAACGAGTTCTACTTGACCTTGCTGTGGTCGGTTACCGTGTCCATGTTTCCCTTCGGAGGCTTCCTCGGCTCTCTCATGGTTGGCCCCTTGGTAAATAACTTAGGCAGAAAAGGAACCTTGCTGTTCAACAACATCTTCTCCATCGTGCCTGCACTCTTAATGGGATTCAGTGAGCTCGCCAAGTCATTTGAGATGATAATTGTGGCCAGGGTTTTGGTGGGAATATGTGCAGGTCTGTCTTCCAATGTCGTCCCCATGTACTTAGGGGAGCTGGCCCCTAAGAACTGGAGGGGGGCCCTGGGGGTGGTGCCCCAGCTCTTCATCACCATCGGAATCCTTGTGGCCCAGATCTTTGGTCTTCGGAGTCTCCTGGCAAACGAAGAAGGTGAGTTCGGGATGCCTCCAGACCATTAGCCCGCTCCTATGAGCTGGTCTTTTCTGCAGAGCCCTGACCCCACAGTGTGGAGGTGGTGGTTGTGCTGAGCAGGCCTGAACAAGTTGGTGGGGACATACAGACCGGTGTTCTCTGGTCCCTCTTTGGACACGTAGGAGGGGGCTTCGAGGGAGCAGGATAAACTGCTGTCTGAGTGGCTGCTAGACCCGGGGCTAGGTAATGAAGGCAGCCAGGGGGCCAGACTCTATGTTTAAGGCTTCCAGCACCCCTGCACTGGGGCCTCCCAGCAGCTCAGCTGCCCAGGGACTTGTGGTCATCCCACTGCAGACCAGGAAAGAGGGTCACAAGACCCAGCCCCCGTGGAGGTGGTGGTGAGTCTCAGGGCCAGCATCCACCCCAGACCTGGACTCCAGAGCCACACTCCCTGCCCCACGAGCCTGGCGCCTGGCACGTAGTAGGTGCACAGTAGCTCATGACTGTCACTGTGTTTGCATGGCTTCCCCTTTCTTTGTCTTAGGTCTCAAAACTCTGAAGGGAAATCACCACTAATAAAGCACCAGTCAAAACATATAAAGTCTCGTCATGGGCCAGACACAAAGCCTTTTATATTAATTCATTTAATCTTCCAAACAACCTATGAGCATGTACTGTTACTGTACCCATTTTACAGCTGTAGACCCTGAGGCCGGGAGAGGTTGTATTACATGTCCAAGGTGTCGTTAGGACACAAATGCAGGCAGTGCAGGCCTGGGCCGGAGTTTTAAGTACCCTCTCTCCCACCTTACAATCACCCTTGTAAGGATCTGGGACCAGGAGTGAAGCAGCTAGGTTCCTGTCTCCCGGTGGTGGCACATAACCAGCCAGCAGGACCCAGAAAACCCCTGGCACCTTTCAAGTACTCTGTGGTATGTGGGGAAAGAGCCGTAGGTCCACCCAGGGAGAGGGGCTCAGAGAG EMBV3_18476 AATTATTCGGTTCCAAAACACCAAACTTGTACTGCACACGGTCCCCATGGAAAGGCCCCC Gene BVT0102_046814 + 0 NULL GK000008.2:77356426-77361674 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38650 GCTGCTCGGTATGAGAGTGCTGCTGTTATTCTTCATTCTCCTTTGACCTCAGGAATGCGA Gene GeneID:781153|FAM108B1:NM_001101278:5_cdna UTR3_Alt 2 NULL GeneID:781153 8 GENE FAM108B1 NULL family with sequence similarity 108, member B1 EMBV3_18480 AACAGATGAAATTGTGGAGGAAGTCAAATAGGAAACCACCAGAGCTCTTGGGGCCAGTTC Gene GeneID:511114|OSTN:NM_001098935:75_cdna UTR3_Alt 1 NULL GeneID:511114 1 GENE OSTN MGC160057 osteocrin EMBV3_00942 AGGTGGCCATGAACCCCACCAACACCATCTTCAACGCCGACCTTTTCCGCGGTACCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06838 CCCAGCAGCTGCTGAAGACAGCTCTAAAAGGTGAACAACATGCCTATGATGGCCCTGGTG Variant GeneID:613305|MIF4GD:NM_001034732:20_cdna 161^426 3 EMBV3_32979 GeneID:613305 19 GENE MIF4GD MGC128193 MIF4G domain containing EMBV3_08776 CAGCTGCTTGTTCGTGGTTGTGCTGGTGATACTGATCGGGTGTTACATTGCCATTTCCAG Gene GeneID:785030|GPR87:XM_002685019:180_cdna Constitutive 0 NULL GeneID:785030 1 GENE GPR87 NULL G protein-coupled receptor 87 EMBV3_00060 TCCCCATTACACTATCTGCCTTTCGTTCTCGCGCCCCTCTCGGCTTCGCGTCAAAACCCT Gene GeneID:517952|HAND1:NM_001075761:23_cdna Constitutive 0 NULL GeneID:517952 7 GENE HAND1 NULL heart and neural crest derivatives expressed 1 EMBV3_08068 CCCCCTTTACAGATATGAAAACTGAGACACAGAAGGGTTGAGTAACTTGTGGCAGGTCAC Gene BVV0102_179527 + 1 EMBV3_16230 GK000003.2:14117839-14130239 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03453 GATGATCTAGTGGTGGACGTTTCCAATGAGAATGACAAATCCTCCACCCCTGGACTCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42448 TGCTGCGCCTCTTCCTTGCTACATCTCCGCTTACTGTCACTGGATCAGCACACAGAAACA Gene BVV0102_074189 + 0 NULL GK000028.2:44451567-44495475 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160858 TCONS_00160859 1 XLOC_097770 Coding TCONS_00160859 XLOC_097770 NonCoding Coding LOC100848205 28:44494192-44495459 j TSS120199 852 2 TCONS_00160859_3 83 2 0.328593996840442 0.00323499789766936 0.00206791882239951 0.00510786951365144 0.00140734474353596 0.00377543553773988 5.26530714163058e-07 0.002036629252804 0.000836915604783498 0.00104231500342324 0.00134649296264744 8.86655993776559e-05 0.00015213461392796 0.000639798152630364 9.70425708196597e-11 0.000732567580362408 0.0027317684440865 1.86136832985476e-06 0.00242413116634202 0.00970003989272055 0.012182970929923 0.00165061056065951 0.00182159953131828 2.07182454416264e-10 0.00216269776438019 0.00426009971887815 0.00211956444716792 0.00331895903108467 1.68594081865212e-14 0.00035401221968853 0.00245874803934895 XR_240539.1 LOC100848205 PREDICTED: Bos taurus uncharacterized LOC100848205 (LOC100848205), 0.0 1454 100.00 0.944835680751174 NR_038275.1 FLJ31813 Homo sapiens FAM21B pseudogene (FLJ31813), non-coding RNA. 3e-25 120 79.29 0.163145539906103 0 noncoding 0 0 0 0 -1.50664781628581 0.00223593877248508 -0.0428936664006054 0.447611427278636 CCAGAGCGCCCCGTGACCTGCCCCTCACGTGACCGGATGTGGGGCGTGCCGCCGAAGGGAGGCTGCGCCAGCTGGCTGCGGAAAAGAAAAACAAAACAAAACAAAACAGGAAGACTGCGGAAGCCAGGGGGCGCTGAAGGGGTGCATGAGTCAAGTTGAACTTCAGCTGAAGGGCCCGAGTGGCAGGCGCGTAATTAGTCCGGAAGTACGCAGGGAACCAGATGTGTTCAGAGGGGAGCCAAAAGGATCTTGGAAAACCCATCCAAAGAGCTTTAAACGTCCGGAGATGTGTGCAGAAGAGCTCGCAGCTGCTGCGCCTCTTCCTTGCTACATCTCCGCTTACTGTCACTGGATCAGCACACAGAAACACAGATTTACTGGAGATTGATCTATCTCGTTATCCTCCTGCTTTTAAGGACATGCGCGGTTTCAACTCACTGGGTAGGGCCTCCTTAAAATCCTTTACTCCCTAAATCCTTTACTCCGTAGGCAATGCCCTCAGATTCAAGTCCAAATTTCTCGTATGACAGGCAAAATCCATTTGTAATCTGACCCCTGCCTGTGAATCCATTCTCAGCTTTCCCGGCTTCCCAGGAGCGCTCAGTGATTCAGCTGCTCTGCCTCACACTTCCCCGAAGGTCCATCTGCAGAGACCTTCTTCTGCCAGACCAACTTACCTTTTAAAATGAAGATTCCAATTTCTTTCCATTCCTATGTGCCCATGGGCAAGTTATTTAATCCTTGTCAGTTACCTGTCTTTCAGGAATGTGGTGTTAAATGTGGTAAATGTGGTATTTGTGAAGTACCAGGGTGCCTGCCATACTGTAAGCATTAAACGTAGCTCTTCCCGTG EMBV3_31312 AGGGCTCCTACTTCTCCGAGGGAGACGACTACTCGGATGACCCCACCATCTCCCTGCTGA Gene GeneID:506235|HSF1:NM_001076809:41_cdna Constitutive 0 NULL GeneID:506235 14 GENE HSF1 MGC143130 heat shock transcription factor 1 EMBV3_05921 GCTGTGTTTAAGATATAAAAGCAAATATGACTCACTCAGTTCTTGGGGTTGCTCTCCCTG Gene GeneID:360007|TFPI2:NM_182788:18_cdna Constitutive 0 NULL GeneID:360007 4 GENE TFPI2 NULL tissue factor pathway inhibitor 2 EMBV3_36975 TGTGAAGCTCATGGTGGAGATGGAGAAGAAGCTGGAGAAGGGCCAGTCCATCGACGACAT Gene GeneID:286822|CKM:NM_174773:71_cdna Constitutive 0 NULL GeneID:286822 18 GENE CKM NULL creatine kinase, muscle EMBV3_33672 GAGGAGCCCGAGGGGGCGCGGGCTCAGCGTAGACTCTGCATTGGAAGACATGGATCTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06264 ACCTTGTTCGAGTAGAAGCCACGGTCATCGAGAAGACAGAATCGTGGCCGAGAGTCAACA Gene GeneID:618609|MRPL21:NM_001076514:28_cdna Constitutive 1 NULL GeneID:618609 29 GENE MRPL21 MGC133585 mitochondrial ribosomal protein L21 EMBV3_00709 GACTTTTACAACTGGCCTCCTATTTGCATTTCATGGGGCTTGACGAGGTGGTCTTCAGGC Gene BVT0102_106409 + 0 NULL GK000008.2:85895987-85913463 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228545 TCONS_00226093 2 XLOC_138516 XLOC_137922 NonCoding TCONS_00226093 XLOC_137922 NonCoding NonCoding LOC100848978 8:85905375-85907321 x TSS169122 645 1 TCONS_00226093_1 43 0.285271317829457 2 0.669408740359897 0.000303844546016333 4.67369141025195e-05 7.17363319924018e-05 0.000102997188396272 0.000405691372226866 6.65498919804251e-05 4.52070836319744e-05 0.000132966479153395 6.37976858257482e-05 0 0 0 4.44851105418213e-06 0 0.000304260619303007 0 0 0 0.000555887021150508 0.00121811589099425 0.000371817705101127 0 0 2.59916717159295e-05 5.37090230664126e-05 0.000174771384064871 0.000263435416036551 0 0 0 XR_232300.1 LOC101905127 PREDICTED: Bos taurus uncharacterized LOC101905127 (LOC101905127), 1e-41 174 83.33 0.258914728682171 0 noncoding 0 0 0 0 -0.246962378665971 0.0659045305477512 0.0564769334037805 0.435585252561217 GGTTAGACTTTTACAACTGGCCTCCTATTTGCATTTCATGGGGCTTGACGAGGTGGTCTTCAGGCTGGATACGTAAAACTGTTAGCATTTCCTGAGACAAGAGATAGATGGGCTCCAGTTAAGACATTAACAATCAGCCTCCTGTTGCCCCTCCGAAGTGGAAGTAACAATATAAACAAGGCAGACCACGGCCAAGAGAACATCCAATTGCAGGGGGACCATGTGAGCAAGACAGCGTCCAAATGAAGATCGGAAATCAGCAGATCTGCACTCAATGGAAAAATGACAAAGAATCTGATTTCCTACATTAATGATTAACTGAGATCGTTTCCCCTTTTTGCCTTTAAAGATTTGTCACGGCTGAGCAGAATCTGTGGACTTGGTCTCAGACAAGAGTTCCCTTTCTCCCCAGACTGTCAGTTTTTCTGAATAAAATACCTTTCCTTTGTACTGACTCTTGGTCCTCAATTACTGACTTTTGAGCAGTAAGCAGGTGATCCTGAGTTCAGTAGCAATATGAGGGGCCAATTTGGAGGCTGGCAGGCTCCCAAAGGCAGCCTCTGTCTAGTCTCTTGCTCTTCACAACACTCAGCACCTGCACTCAGATGTGTTTTGTTGCTACTGGTGGAAGTTCCACGTAAGCAG TCONS_00228545 TCONS_00228545 r 5' 0 TCONS_00228545 TCONS_00228545 r 5' 0 EMBV3_01153 CATCTATTCCTTCCTTTTTCTGTATTTAAGGAACAGACAGCGCAAGCTGGGGACGAAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40216 TGCCAGTCCACGTAACATTATTGGCAGACATTGTCGAGGGCAAGAAGCCAGACGCAAAAG Gene BVV0102_248688 + 0 NULL GK000029.2:5057739-5082167 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164401 TCONS_00164406 TCONS_00164407 TCONS_00164405 TCONS_00164402 TCONS_00164404 TCONS_00164400 TCONS_00164399 TCONS_00164403 TCONS_00164398 1 XLOC_100212 Coding TCONS_00164398 XLOC_100212 Coding Coding NAALAD2 29:5081275-5105089 j TSS123014 2307 1 TCONS_00164398_4 407 0.299089726918075 12 0.903624070885651 3.77446625380546e-26 0 6.51641292322553e-128 6.68165122571483e-50 4.83547470216051e-05 7.91989241204138e-40 1.72005992296934e-05 4.10545405279074e-25 5.27188879332702e-10 2.46151433498533e-25 6.43744857464565e-05 4.04256491385284e-13 2.33354216847169e-141 2.77755471375138e-06 7.68682369325662e-71 0.0155795585764113 0.013549697447142 0.0128178221182109 3.06633958297925e-18 4.54170504274518e-12 1.22453543435125e-50 0.00716867890590328 0.00636014017762216 0.00722503870144861 9.67576240227314e-06 1.24472345040051e-94 1.31425358772549e-06 5.93712408770745e-07 0.000136870787046494 0.000905877823481752 XM_005226668.1 NAALAD2 PREDICTED: Bos taurus N-acetylated alpha-linked acidic dipeptidase 2 (NAALAD2), transcript variant X3, mRNA. 0.0 4048 100.00 0.972258344169918 NM_005467.3 NAALAD2 Homo sapiens N-acetylated alpha-linked acidic dipeptidase 2 (NAALAD2), mRNA. 0.0 1725 86.65 0.620286085825748 TCONS_00164398_4 sp|Q9Y3Q0|NALD2_HUMAN NALD2_HUMAN N-acetylated-alpha-linked acidic dipeptidase 2; 0.0 746 87.22 0.997542997542998 2 coding 0 0 0 0 -0.0135382137280617 0.899744870771728 0.0408728060610082 0.446157820183187 GTCATGATATCTGCAACTTACTTGCAAATGGCTCAACAATATTACAGTTATTTCAGTTTGCGTGGAAGGTTAGAATGCATGTTTATAATATCAATAAAATTACACGGATTTACAATGTAATCGGAACTATCAGAGGATCTGTGGAACCTGACAGGTATGTTATTCTGGGAGGTCATCGGGACTCCTGGGTATTTGGAGGCATTGACCCAACCAGTGGGGCTGCTACTTTGCAAGAAGTTGCCCAGAGTTTTGGGAAACTGCTCAGTAGTGGCTGGAGACCAAGAAGAACTATCATTTTTGCCAGCTGGGATGCAGAAGAATTTGGACTTCTGGGTTCTACAGAATGGGCTGAGGAGAATGTAAAAACACTCCAGGAGCGAAGTGTTGCTTATATCAACTCAGATTCATCTATAGAAGGCAATTACACTCTCAGAGTTGACTGTACACCCCTTCTTCATCAATTGGTGTATAAACTAACAAAAGAGATCTCCAGCCCTGATGATGGTTTTGAGAGTAAATCTCTTTATGAAAGCTGGTTAGCAAAGGACCCTTCGTCAGAAAGTAAAACTTTGCCTAGAATCAACAAGCTGGGATCTGGAAGTGATTTTGAAGCTTATTTTCAGAGACTTGGGATTGCTTCAGGAAGAGTCCGCTACACTAAGAATAGGAAAACAGATACTTACAGCAGCTATCCAATATACCATACAATTTATGAGACATTTGAGTTGGTAGAGAAGTTTTATGACCCCACATTTAAAAAGCAGCTTGCTGTGGCTCAGCTACGAGGAGCATTGGTTTATGAGCTTGCAGACGCTAAAATCATTCCTTTCAATATTCAAGACTATGCAAAAACTTTGGAAAACTATGCAAGGAGTATCTATAATTCATCCAGGAAACATGAGCAAGCATGTAGAGGCCATGGAGTATCATTCGAGTCCTTATTTTCTGCTGTGCAAAACTTCTCAGAAGCCGCTTCAGATTTCCACAGAAGACTTTCACAAGTTGATCTGAATAACCCCATGGTAGTGAGAATCATGAATGACCAGCTGATGTTTCTTGAAAGAGCATTCATTGATCCTCTTGGTTTACCAGGAAGGCCGTTCTATAGGCACATCATCTTTGCTCCAAGCAGCCGCAACAAATATGCTGGTGAATCATTTCCTGGCATCTTTGATGCTATGTTTGATATTGAAAATAAAGCAGATCCTCATTCAGCCTGGAAAGAAGTGAAGAAACACATTTCTATTGCAGCCTTTACAATCCAAGCAGCGGCAGGGACTCTGAAAGAATTCTTATAGTAAAGTCTCAGGTAACTGGCTGCCGTTAAAAGTCTGAGGATAAAATCCATCTTTCTGTTAACACATGAAGCCAGAGCATGCTAAAATTTTGCTTTTCATGTCATGTTTTGACTTTAGACTTCCAGCTTGTTCATCTGTAAAGAGATTTTTGGCTCTGAAAATTTAAAACTTCATCATCAAAGTGCTAATCCAATAAAACAAACCAAAGAACTTCATCATTTGTAGTAGAATGGAGTAAGAAATGGCAACCCACTCCAGTATCCCTGCCTGGAAAGTACCATGGACAGGGAAGGCTGGCTGACTACAATCCAAGGACATGACTGAGCATGGCCATGCATGCATATGGAAAAAGAGATAAAGTAAATGAAAATTCCCTAAAATAAAATATGGCAAGGAACTTAAACTCTTCAGACATTGTTGGCTAGAATGTAAAACAGTTCAGCCACTTCAGAAAACAGTCTGGCACTTTTTTATAAAGTTAAATATATACTTATAGCTCAAATTCTACTTCTAGATATTTACTAAGGAAAAGTAAAAACATGATCACCAAGACTCTTAGCATGTTCGTTGCAGCTTAATGTGCAAATAACTGTAAGGAAAGATTGAATGCATGAGGAGAAGGGGATGACAGAGGATGAGATGGATGGATGGCATCACCGACTCAGCAATAAAATGAAAGAATTGCCAGTCCATGTAACATTATTGGCAGACATTGTCGAGGGCAAGAAGCCAGACGCAAAAGAATGCTTAGCATGAGATTCTTCTTAATACACGAAGAAGCAAAACTAATCTATGGTATTAGAAATTAGATCATTGACTGCATGGGTCAAATAAGGGTCAGGGAGGTTTGTGGCACAGAGGGAAGTTTCTGGCATTATGGGAGTTTTCTCTATCATGATCTGGGTGATGTTTACACAGGTATACACATTTGTCAAACCTCATCAAATTGTACACTTAAAATGTATAACAATGATAAATGTTATTACCAATAAACAAAATCTGGCAAGCA EMBV3_02843 CTTGAGGCCAGAAGATGCAGAAGCCAGAGTATGAAGTGGAATGAATGCTCCTGTTTTGAG Gene GeneID:509774|RNF19B:XM_002707803:248_cdna Constitutive 0 NULL GeneID:509774 2 GENE RNF19B NULL ring finger protein 19B EMBV3_13107 GAACAGCAACAGTGCAGGGGTCTGTCACTTAGGAGATGAAGAGAGTAATTTCATTCTGCC Gene GeneID:533057|IARS2:XM_002693960:151_cdna Constitutive 0 NULL GeneID:533057 16 GENE IARS2 NULL isoleucyl-tRNA synthetase 2, mitochondrial EMBV3_40643 TACTTGTTGCTTTTCCCTTTGAGAGAGTAACAGGCAGGAAGACCAGGAGTCTCCAAATGG Gene BVT0102_184172 - 1 EMBV3_04094 GK000008.2:38735552-38822610 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12988 CTTCTGTTGGAAGACCAACAATTGGAACAAGTTCTGGAAATGTTCATCTGGGCAGAAGTG Gene GeneID:615510|LOC615510:XM_002687638:796_cdna Constitutive 0 NULL GeneID:615510 5 GENE LOC615510 NULL similar to UPF0419 protein C12orf48 EMBV3_04688 GTAGGTTAGTCAATAGGAATATTGTGTGTTTGTGTTGCAGTTGGTAAAGCCTAGCCCTGC Gene GeneID:616245|DMRT1:NM_001078060:11_cdna Constitutive 0 NULL GeneID:616245 8 GENE DMRT1 NULL doublesex and mab-3 related transcription factor 1 EMBV3_17912 TCTGCAGAGACACCTGTTTCAGCCACATCTAAAAGGACACAGTTTATGCAGTAAGGACTG Gene GeneID:507975|FIBIN:NM_001015541:23_cdna Constitutive 1 NULL GeneID:507975 15 GENE FIBIN MGC142766 fin bud initiation factor homolog (zebrafish) EMBV3_23936 TGACCGAGTTCACGGGTACCTTTGCTTAGGGCACGGGAAGTGGCCGTGTTAATTTATTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10846 GAGACCTCAGTAAAGCAGAAGAAGACTTAGATGCAGTCTCCAATAGCCTCGGCTTCCCTG Gene GeneID:282244|GUCY2C:NM_174547:8_cdna Constitutive 0 NULL GeneID:282244 5 GENE GUCY2C NULL guanylate cyclase 2C (heat stable enterotoxin receptor) EMBV3_26031 CCATTCAGTGGGTCTACAGGGAGCCTGGGTATCTGCATTTCAACAACCATTCCAGGTGTT Gene GeneID:786557|LRCH3:XM_002684799:162_cdna Constitutive 0 NULL GeneID:786557 1 GENE LRCH3 NULL leucine-rich repeats and calponin homology (CH) domain containing 3 EMBV3_13219 GGCAGCACAGGTACTGGCAAGAACTGGACACTGAGGACAAGAATGAGGAGACAGACAAAA Gene BVV0102_294576 + 0 NULL GK000011.2:88750177-89097864 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05716 CAGGCAGCTCTACAACGTCTCTTTAAGAAGATCATGAGGGCCCATGGGGTGAAGAACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31455 CAGCTGCTCTATGATCTGCGTTACCTCAGTGTAGTCCTGACAGCCAAGGGTGAAGAGATG Gene GeneID:515788|COG1:XM_002696195:211_cdna Constitutive 0 NULL GeneID:515788 19 GENE COG1 NULL component of oligomeric golgi complex 1 EMBV3_22558 CAAACTCAGGAGATGGTGAGGGAGAGGCCTGGTGTGCTGTAGTCCATGGGTTGCAAAGAG Gene BVT0101_051118 + 1 EMBV3_10607 GK000001.2:114768665-115291700 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32410 TCAACATATGGGGAAGCACAGTGAGGGAGCAAGGTTTACACATCCAGGTTAGCTGGCTAG Gene BVV0101_040305 + 1 EMBV3_09788 GK000002.2:80369682-80641458 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41359 TGTACCCCTGAGGAGCGACGGCATAATCAACGGGAACGACTCAACCAGATCTTGCTCAAT Gene GeneID:540563|ASH1L:XM_002685976:295_cdna UTR3_Alt 2 NULL GeneID:540563 3 GENE ASH1L NULL ash1 (absent, small, or homeotic)-like (Drosophila) EMBV3_20395 GATCGCGCTGAACCTAAGCCACAACCCGAGGTACAGTATATCAGAAGTACGAGCCAATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37005 GTTACTGTGGCAGTCATGGGTAGAACTCAAGAAAATGCATCACAAAGGATCTAATTCACG Gene GeneID:512958|EBPL:XM_002691791:413_cdna Constitutive 1 NULL GeneID:512958 12 GENE EBPL NULL emopamil binding protein-like EMBV3_00132 AAAGATAGCATTCAGCAGAGCTTTAGCAATGAAGCAAAGGCCCAAGCCCTTCAGGCCCAG Gene GeneID:616342|SDCCAG8:XM_002693989:270_cdna Constitutive 0 NULL GeneID:616342 16 GENE SDCCAG8 NULL serologically defined colon cancer antigen 8 EMBV3_11406 GGACTTGTGTATATACACATGCACAATAACCCCACGAGCATGTTTATAGTCAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_36083 CCTTGAACGTTATGGACGAGAGGGAAAAGATTGACTGGAGAGGACTTGACATGATTTGGA Gene GeneID:504895|BCAS1:NM_001077850:859_cdna Constitutive 1 NULL GeneID:504895 13 GENE BCAS1 MGC152145 breast carcinoma amplified sequence 1 EMBV3_35915 ATTGAATACGAAAACAAGCAACTGTGTCAAAAAATCGCCAATGCCCACCGAGGCCCCGCC Gene GeneID:100296376|LOC100296376:XM_002696036:310_cdna Constitutive 0 NULL GeneID:100296376 19 GENE LOC100296376 NULL hypothetical protein LOC100296376 EMBV3_21622 CCTGTAGCATCTCAGGCTGCCCTGTGTGACTTCTGCATGAACCTGGCAACACTGATGTAG Gene GeneID:514284|CEP164:XM_002693001:184_cdna Constitutive 1 NULL GeneID:514284 15 GENE CEP164 NULL centrosomal protein 164kDa EMBV3_22887 GCTTCACACTAAAGGTGAGCACATGACGGAAGAGGAGATGACGGACTGCTTTGCCACACT Gene GeneID:536738|WDR66:XM_002707746:630_cdna Constitutive 0 NULL GeneID:536738 17 GENE WDR66 NULL WD repeat domain 66 EMBV3_40980 GTTTGTGTACCTATGGCTGATTCTTGTTGATGTATGGCAGAAACCATCACAACATTGTAA Gene BVV0102_046446 + 0 NULL GK000021.2:32839249-32948719 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36275 TGGGCCAGTAGCTCTATAGTTCTTTTCCTGGGCAGACACAAACGGCGAATCCAACGCATT Gene GeneID:790265|VN1R1:XM_002695496:263_cdna Constitutive 0 NULL GeneID:790265 18 GENE VN1R1 BOSTAUV1R435 vomeronasal 1 receptor 1 EMBV3_12108 GAGAACGGGAGGAGCCACGGAGAAAGTCAGGAAGAAGCTACGCAGGTGCACGGAGTCAAG Variant GeneID:540918|LOC540918:NM_001078029:13_cdna 384^560 3 EMBV3_07638 GeneID:540918 28 GENE LOC540918 MGC152125 hypothetical protein LOC540918 EMBV3_41162 CGCAGATACGAATACGACCACTGGGATGCGGGGCTCGGCTCGTTATGACTTCTCCCACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13006 GGCTGCCCACTGCTTTGACAGACTTGACTCTTTGGAACCTTTCTTGCTGGGCTACAGGAT Gene GeneID:618656|LOC618656:XM_002688511:40_cdna Constitutive 0 NULL GeneID:618656 7 GENE LOC618656 NULL similar to marapsin 2 EMBV3_05939 CCTTAGTCTTACTATGAAGAATTCAGAAGTCAACCTGAAATGGAGCATTCCCAGAGGACC Gene GeneID:100336444|LOC100336444:XM_002699595:100_cdna Constitutive 0 NULL GeneID:100336444 X GENE LOC100336444 NULL interleukin 13 receptor, alpha 2-like EMBV3_02112 GATGGCACTTCAGGAGCTTAATAGATGTCCGTTCCGAGTAGTTGATGAAATCAATCAGGG Gene GeneID:508938|SMC5:XM_002689640:7_cdna UTR3_Alt 2 NULL GeneID:508938 8 GENE SMC5 NULL structural maintenance of chromosomes 5 EMBV3_28061 CTGGGCATTACAACTAGTGATTGTCCTGGTTCCTGGAGCTATTTTCCATCTATATGCTGC Gene GeneID:781323|LOC781323:XM_002690288:8_cdna Constitutive 0 NULL GeneID:781323 9 GENE LOC781323 NULL similar to Gap junction epsilon-1 protein (Connexin-23) (Cx23) EMBV3_17323 CTGTGCGCTCCTCTGCATCCTCAGCATCATGCTTCTGCCGGAGACCAAGCGCAAGCTCCT Gene GeneID:539848|SLC22A17:NM_001130755:237_cdna Constitutive 0 NULL GeneID:539848 10 GENE SLC22A17 MGC128881 solute carrier family 22, member 17 EMBV3_38438 CCCCATGACAACCGACGTTGGGCCTCTGAGCATCCAGGATATCGCAATCCTCTTCAACAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34551 CCCCTATAGCTGAACTGCTGTCCTCCTGGAAATCCTTCCCCTTACTTTTGTGGCACCATC Gene GeneID:540311|HNRNPA0:XM_002689195:69_cdna UTR3_Alt 1 NULL GeneID:540311 7 GENE HNRNPA0 HNRPA0 heterogeneous nuclear ribonucleoprotein A0 EMBV3_02751 CAGGCTGAACGTGAGGAACAACGTCTGATGCTGGAGGAACGAAACACGGAGTTAATCATG Gene GeneID:100298513|LOC100298513:XM_002692057:68_cdna Constitutive 0 NULL GeneID:100298513 13 GENE LOC100298513 NULL hypothetical protein LOC100298513 EMBV3_25376 CAATGGTCAGTGTGATTCTTGCTGCTCTTCCTTTTCGTGAACAGTGGATGTGGGACAGTA Gene GeneID:539881|KCTD8:XM_002688234:32_cdna UTR3_Alt 2 NULL GeneID:539881 6 GENE KCTD8 NULL potassium channel tetramerisation domain containing 8 EMBV3_15573 GAATTTCTTATGTCAAGATCTGGGGCTTCCCAGGTTGGCCACTGCGGTGTAGACAGGGAT Gene BVV0102_191456 + 0 NULL GK000004.2:50362656-50703554 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187416 1 XLOC_113462 NonCoding TCONS_00187416 XLOC_113462 NonCoding NonCoding - 4:50699930-50700828 - TSS139784 898 1 TCONS_00187416_1 77 1 0 7.5755623550794e-05 0 9.27461047006828e-05 0 1.64938848490177e-05 3.98336113940369e-06 0.000383152660036852 0 0.000114222465232587 0 0 0 0 0 0 0 0 0 0.0010700507864488 0.000168173798096956 0.000121699905687175 0 0 0 1.54308998531823e-05 0.00029813864185753 0.000274036134240633 0 0 0 0 noncoding 0 0 0 0 -0.0563234301324634 0.588614815520809 0.0157241173197782 0.823318774918932 CACATGCAGATAATGACAAGTTGACTAAGAGGGAATGTAGTTAGGTCATATGAAAACTCATTTCTGGCAATGTCTTGGTTTCAAAAACATGTGATAGATACAGGGCAATCAAAGCTCATCTGTGCTCTTTTGTTAGAATTTCTTATGTCAAGATCTGGGGCTTCCCAGGTTGGCCACTGCGGTGTAGACAGGGATAAGTATGGTCTGGAATATTTATATTTCATAACTATAGCCCTATGGATAGAGTCAGAAATGATATGCTACTCAGTAATTTTGTCATTTGGCAACAGTAAGGCATGGTAACATATGGTTTGCTCTTTGGAGTTAGCATAAATGTTGCCATTGACTGAAATTAAGAATTTTCTTATTCTAACAGGGAACCAGTTTTGATACATGTGTAAGTTCTTTCATCTTTTCACGTGGAAGGAAGCACACACTGCATCATTATGTATAAGACTCTGGGGTTTTGGTTTAGTGGGTTGAAGGATGTGGCCAGTGAGGTCAAGGTCATGGTTTAATCAGAAAACCACTTGGTTCCCCAAGCAAAGTCTGCATTTCTAGCTGCAGAAACCCATTTCCTTGGTTTTAAAAGAGAATTCTGAAGAGTGTGCTATGGCTCAGCACAAATACGTTTATTCCAGGATTCAGAAAATAATAATTCAGAAAATAATTCTGAATTCATTTGTCAGTGGATCATCCCTTTTGCTCAAAGGAGAAGACAATGTAACCAATAGTTTTCTCTGTTTGTAAAATATTCAATATCTCTCCTTCCATTTTAATGCTAAAAGAAATTTACTAATTAGAAATCATTATTCATTTTGTTATATATATTCATTGCTTTTCTTCCTGCTTATACTTTCGCCCCTTCTTTTTTCATTTTCCAGAAATGTTCATTCAA TCONS_00181602 . 5' 1528 TCONS_00181602 . 5' 1528 EMBV3_41501 GTTCTAAAGAAATCATCCATCCAGTATCTTCTTCTAAAAAGAGTCTGTCAGCCACATGAA Gene GeneID:513589|SLA:NM_001024533:23_cdna Constitutive 2 NULL GeneID:513589 14 GENE SLA NULL Src-like-adaptor EMBV3_36458 GATGGTGTTAGCCCATAGTCACCCATCTAATTCCTGGAGCACTTTAAGAAAGGGGGAATC Gene GeneID:513300|LOC513300:XM_002690488:432_cdna Constitutive 0 NULL GeneID:513300 10 GENE LOC513300 NULL similar to SUMO/sentrin specific peptidase family member 8 EMBV3_11013 TGCACATGAAGCGTTTTGTCAAGGATCTGGGATCTACCGCTACCAGTCTCATGACTATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35150 TCCTGGGCCGAGATTCTTTTCCCGTGGCCGTATCGTTCTGATTTCACGTGCACCACAGTA Gene BVT0101_012833 + 1 EMBV3_02117 GK000006.2:118178760-118212843 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204292 TCONS_00204291 TCONS_00204288 TCONS_00204293 TCONS_00204290 TCONS_00204289 1 XLOC_124397 Coding TCONS_00204290 XLOC_124397 Coding Coding KIAA0232 6:118108401-118180637 j TSS152857 6660 1 TCONS_00204290_6 1317 9 0.907925520869385 0.00103116910875074 0.000906502068881668 0.000807870832422801 2.11052032493643e-10 0.000844513825701899 0.000379273679705597 2.80446621378071e-09 0.000341164387568639 0.000614846750520283 7.55549423787023e-05 0.000291947602856903 6.02217451801507e-30 0.000273788131882757 0.000344794446616727 1.27037194111943e-24 0.00101317199563401 2.90262677998381e-05 8.07130928125681e-05 0.000426433559742897 0.000723432199254339 0.000791015662127079 0.000603036943581583 3.35079929788663e-10 0.000158932389836133 0.00116936369967834 0.00111579857894657 0.00038952173141879 0.000102145468755222 0.000162679467188457 6.15852779866535e-05 XM_005208354.1 KIAA0232 PREDICTED: Bos taurus KIAA0232 ortholog (KIAA0232), transcript 0.0 8035 100.00 0.668768768768769 NM_001100590.1 KIAA0232 Homo sapiens KIAA0232 (KIAA0232), transcript variant 2, mRNA. 0.0 4686 84.75 0.631681681681682 TCONS_00204290_6 sp|Q92628|K0232_HUMAN K0232_HUMAN Uncharacterized protein KIAA0232; 0.0 2265 88.44 0.997722095671982 1 coding 1 1 1 1 -1.19884619552401 0.0111438454370054 0.0612469713273518 0.221835594664404 AAGTGCGTCTCATCAGAACAAGAAGGCACCTTTCCCACAAGAGCTATAACATAGCCTCTGCGGACGCAGCCCTCGGCAGCAGGGAGGAGCCCACATTCAGAGGACTGGACGCAGTTCACACAGGTTCTGCTGGAGACTTACATTTGGCCTCGATGTGAAATTAAAGTAGAACATCGTATCTAAATGTATGTTAATATCAGGATGTTGATTCATTGGTCATGCCTGCAGAGGGAAATTCAGTTGTAGATGGCTGACTGCCAGCAGAAATAAATGTTTACCCTAGATGTCCAGCATCTCTCCTTTTTACTGGAGTGAAAATCCCCTCCAGACACCAACAGAACGTCACTGCAGAAAATGCTTCGCATCTTAAGGATGTCAGCCACCTCAGTTCATGCGCCCTGTCTGTGCAGTTGCTGTGGACGATTTACCATCTGAAAGCTCCTCCAGCTCTTACCCAGGCTCCGTATCTGTCTCTGAAATGTCTCTGCTTCATGCTCTGGGTCCCGTGCAGACCTGGCTGGGACAAGAGCTAGAGAAATGTGGCATTGATGCCATGATTTATACTCGATACGTCCTCAGTCTTCTGCTGCACGACAGCTATGACTACGACCTGCAGGAACAGGAGAATGACATCTTCCTGGGCTGGGAAAAAGGAGCTTATAAGAAATGGGGAAAGAGTAAGAAGAAGTGCTCAGATCTAACTCTTGAAGAAATGAAAAAACAGGCCGCTGTCCAGTGTCTTCGATCTGCTTCTGATGAAAGCTCTGGCATTGAGACTTTAGTGGAGGAGCTCTGCTCCAGGCTGAAGGACCTGCAGAGCCAGCAAGAAGAGAAGATTCACAAGAAGTTAGAGGGGTCTCCCTCTCCAGAGGCAGAATTATCGCCCACAGCGAAGGATCAAGTGGAAATGTACTATGAAGCGTTTCCACCGCTGTCCGAGAAGCCAGTTTGCCTGCAGGAAATCATGACCGTGTGGAACAAGTCCGCCGTCGGCTCCTACTCGAGCTCGTCCTCCTCGTCCACAGCCCCTCCAGCCAGCACAGACACGCCCTCCCCCAAGGATTGCAACAGCGAAGGCGAGATCATCCGGGAAAGAAGCGGCGACGCGCCGCCCGCCAGCCTGCACGAGAGAACACAGAGCGGCCGCAGCCACAGCGAGAAGGAGAACAGGTTCAGGAACGGGCCCAGCGAGGAGCGGTCCGCGCCGCCGCCGCCGTCCAAGAAGCAGAGCCGGCACCGGCCGGACGGGAAGCCGCGCCCGCGCTCCTGGTCATCCGGCTCCAGCGAAGCCGGCTCGAGCTCCAGCGGGAACCAGGGGGAGCCCAAGGCGTCCGCGAAGTGCGTGAAGTTGAGGCACAAGGTGCGGGAGATCCGGAACAAGAAAGGAGCGCGCAGCGGGCAGAGCCGGCTCTCGCTGAAGCGCGGCGAGAAGGCGGAGAGAAGCCCACACGCCGCCGGGAGCAGCAGCAGCAGCGGCGGTGGCGGTTCCTTCCGACAGCTGTGCAAGCGGGGCAAGCGGCCGCTGAAGGAGCTGGGCAGGAAGGAGGCGGGGGGTGCCGAGGGCAGAGACCTGTTCCTGGAGAGCAGGACGGACAGGGAGTACAAGGAGGAGCCGCTGTGGTACACCGAGCCCATCGCCGAGTACTTCGTCCCTCTGAGCAGAAAAAGCAAGCTGGAGACCACGTACCGCAACAGGCAAGACGCCGGCGACGTGACCTCAGCAGCTGTGGAGGAGTTGTCCGAGTCAGTGCACGGCCTCTGCATCAGCAACAATAATATTCATAAAACATACCTCGCAGCAGGTACTTTCATCGATGGTCATTTTGTAGAAATGCCTGCAGTCATAAATGAGGACATCGACCTCGCTGGGACCTCATTCTGTCCTCTGCCAGAGGACGACAAATACTTGGATGATATTCATCTGTCAGAACTAACACACTTCTACGAAGTGGATATTGACCAATCCATGTTGGATCCCGGTGCCTCAGAAACCACGCAAGGAGAAAGTCGGATTTTGAATATGATTCGACAAAAAAGCAAAGAGAATACCGATTTTGAGGCAGAATGTTGCATAGTGTTAGATGGAATGGAGTTGCAAGGGGAACGTGCAATATGGGCAGACTGTACCAGCTCTGTGGGCGCCGAGGGCTTTCTCCTGCAAGACCTTGGCAGCCTGGCCCAGTTCTGGGAGTGCTGTTCGTCCAGCTCTGGCGATGCCGACGGGGAGAGTTTTGCGGGAGACTCCCCGGTTCGACTCTCCCCGACCTTAGACAGCACAGCGCTCAATCCGCATTTGCTGGCCGGCAATCAAGAGCTCTTTTCAGATATTAATGAAGGATCTGGTATAAACTCCTGTTTTTCAGTGTTTGAAGTGCAATGCAGTAATTCTGTTTTACCATTTTCTTTTGAAACACTCAACTTGGGAAATGAAAATACAGATTCTAGTGCTAACATGCTTGGGAAAACACAGTCTAGATTACTAATATGGACCAAAAATAGTGCCTTCGAGGAAAATGAACACTGTTCTAATCTTTCAACGAGAACTTGCAGTCCGTGGTCCCATTCAGAAGAAACACGTTCAGACAATGAGACGTTAAGCGTCCAGTTTGAAGAGTCCACACAGTTTAACGCAGAGGATATTAACTATGTAGTTCCTAGAGTCTCGTCCAATTATGTAGATGAAGAACTCCTAGATTTTTTGCAGGATGAAACTTGCCAGCAAAACAGTAGGACTTTAGGAGAAATCCCAACGTTAGTTTTCCAAAAAAAATCTAAACTAGAATCTATCTGTGGTATTCAGCTAGAACAAAAAGCAGAGAACAAAGCCTTCGAGACGACGCAAGCGTGTAGTGAAGGCAGTCCGCGTGGAGATGGCTACAGCTCAGGGGTTATTAAAGACATTTGGACAAAGATGGCAGACAGAAATTCTGCAGCTCCACTAGAAATAGAAAGCGTTGACGATGAGTTGTTTCCGACAGATGTAAATAACTACTGCTGCTGTTTGGATGCTGAGGCTCCAATGGAGCCCCTCCAGGAGCCAAACAAGGCCGTGCAGAGATCAGAATACCACCTGTGGGAGGGCCAGAAAGAGACCCTGGAGAAGAGAGCCTTTGTGTCCGGCGAGCTGTCCAAGGTGGATGGCGGGGACTACACCACCCCGTCGAAACCCTGGGATGTGACCCAAGACAAAGGGAGCTCATTCATCCTGGGAGGGGTTTACGGGGAGCTCAGAACGCTCAACAGCGATGCAGGGTGGGCGGTCGTACCGCCCAGTCACGCCAAAGGGAGTTTGCTGCAGTGTGCCGCTTCTGACGTGGTGACCATAGCGGGCACAGATGTCTTTATGACCCCCGGAAACAGCTTCGCTCCTGGTCACAGGCAGTTATGGAAGCCCTTTGTGTCCTTGGAACAGAACGACCAGCCGAAGAGCGGGGAAAACGGATTGAATAAGGGATTTTCCTTCATCTTCCATGAAGACTTACTAGGAGCTTGTGGCAACTTTCAAGTTGAAGATCCTGGACTCGAGTATCCCTTCTCTTCTTTTGACTTAAGCAATCCGTTTTCACAAGTTCTCCACGTAGAGTGTTCCTTTGAACCCGAAGGGATTGCATCTTTCAGTCCAAGCTTCAAACCGAAGTCAATCCTCTGCTCTGATTCCGACAGTGAAGTTTTCCACCCCAGGATATGCGACGTCGACAGAACACAGTACCGGGCTATCCGGATCTCCCCCAGGACTCACTTTCGCCCCATCTCTGCATCTGAACTCTCCCCCGGAGGAGGAAGTGAGTCAGAATTTGAATCCGAGAGAGACGAAGCAAATGTTCCCATTCCTTCTCAAGTCGACGCATTCGAAGATCCACAGGCAGATCTCAAACCGCTTGAAGAGGACGCAGAGAAAGAAGGCCATTACTATGGGAAGTCCGAGCTTGAGTCTGGGAAGTTCCTCCCCAGGTTAAAGAAGTCTGGGATGGAGAAGAGTGCCCAGACATCCCTGGATTCCCAGGAGGAGTCGGCCGGGGTCCTGCCAGCAGGAGAGCGGAACCCGTGTCTGGAGTGCAGCATGAGCGAGCCTCTGGAGATCGACCTGGAAAGCCCAGAAGCAAACTGTAAAATAATGGCACAGTGCGAGGAAGAAATTAATCATTTCTGCAGCTGCAAAGCAGGTTGTCAGTTCCCTGCTTATGAAGATAATCCAGTTTCTTCAGGACAGCTGGAAGAGTTCCCTGTACTGAACACTGACGTGCATGGAATGAACCGGAGTCAAGAGAGACAAACCTGGTGGGAAAAAGCCTTGTACTCGCCTCTCTTCCCCGCCTCGGAGTGTGAAGGTGTCTTCTGTTTATGAAGCGAGGTGCACAGCAGAGCAGGACGCCGGAGCCCAGCCCAACGGCTTCCACCGCACGCCGCGCTGCAGCGCCGGCTCCGCCGCGGAGGACTCCGGCTCGGAGGGTGGAGAGTTGAGGACAGCTGTCCTGTTGAAGATTTTCTTTCTTTTTTTTTTTTTTTCTTCTTCTTCCAAGCTGTTAAAATTCTTGGCTCTCTGAACTAGACTAGAACCGGTGTGCATGTGCTCGTCTTAGAAGCATCACTGCCTTCCGCGTCCTCTCGCTGCCGCAGCCCTCCCCACCTCCGGCCGCAGTCCGTCACCGCCCCCCCTTGCTAGCACCGCAGCGTCAGCGCCCACGTCCACTCCTCAGAGACTCTAGCTTCGGGGACACGCAGGCTCTGTCCTCTCCGAACTGGGGTGTGAATGCTTACCCCTGCGGCGGGTCAGTGCCTGTCTCCGGAGGCCAGAGGGCAGCCTGGGTGACTCATCCCCGGTCTCCATTCAGTAAAAAAAAATCTCATGTACATTTAACGTAGGAACTGCAAGGGTGTGCTTTTAGAGACTTAACAAAAATACTGTGTTTTCTATCTTAGGATCTTCCCCTAGAGTATGTACCATGGACAGTGCCATGGTCGGTGACCTCCTCGCTAGCTGAGGCAGCCAAGGACTTGGAGGTATGGGGTGGCATGTAAGGCCAGGTGGGGCAGAGGGCGGGGCAGTGCACCCCAGCCTGCTGTCGTCGCAGTCTCTTTGCCCGCCCCCGACACCGGTCAGGGTTTGCGGTGAGTCTTGGCAATACTCGGTGAGGACCTGGGTTGCAGGTGAGATTCTTGCAGTGACCGACATGGAATCCAAGCCCCTCCCCCCGCCCTAGAACTTGAGATTGTAAACGTCTGACCTGAAACAAAGGCCACCTCACGACCCCAAAGAGACCTTGGCTGCAGCAGCTGGCTGCGCTCCTGGCTCTGACTTAGAGTAGCTTAGATCTCCTTTTGTGTTTGAGAGAATGTTCTGGGCAAGTTCTGTGTGGCGGGTCTGAGAGCAGAGTCCTGGTTTCTCCCGTACCGGTGTGAGGGCTCCACGGGGCCACTGGCCCGTGTCGTCGGGAAGCCAGGGCTCGGTCAGTCTCGTCCAGGCCCATCCGTTTCACGACGGTCACTTCCTCAAGCTTTTCACACCGCCGCGCAACAGGCTGAAGTTAGAAGGAGCGATATTTGCAAAACCTAAATGTTTAAAGTTACTTTTCTTTTATTAACCGACGTGTGAGATCAGTTGAGCGTGTCTGTAACGTCGGGAAGTCTTAACTGGATGAGACAGCTCCACCACTGATTCTGGCAGGCACTAGACACTTAATATGTTCTAGCTGGGAGCTGAGCTGGCCGAGAATATGAGGTTTGCTTCAAGCATTGGGTTTCGTTGCCTTGCCTTCATGATGACACAGGAAACTCCCTCCAGGGCTGTGGAGTCACCCCCTCCCCCGGCACTCTCTGTCCTCACTGTGGGAAACCTGATGGGCCGTGGGGTTTGGTCTCACCACACGTCAGGGTTTGTTTTTATACAGCACATCTTTGACACTTTAAAGTGGGTTTGTGTGTGTGTGTGTGTGTGCGTGTGTAAGGTTTTTATGTTGCTGTTATTTATTTATAGACTTTATAAGGGTTTATGTATTTTTCTTTCTTCCAGAGCTTCCTAAAAATTGATTAGCATCTGCACTGAAATATAATTTTTAACAGCAAAGGCAAAAAAAGAATTGGAAGTTGTAAAATTCCTTTAAAAAAATCACTACAGTGACGATCATCCTAGAAATCGTTGCTCGTGTAGCCGAGACCAAATAAATAGATTTCAGACACAACCTTTAGCTCGGTGATTTCGGACAGCTGCTTTTTTTTTTTTTTTTTTAATCATGAAAAGGCTCCAGGTGGTCACGTGCAGACTTCCTCACGCTGGTGGGAAGGCGAGGCACCTCCCACGGGAACGGGAAGGGATTAGAAATGGGCGAGGGAGTGAACAGATTACTTATTTATTTGTTTTTGTAGCTAAGTGGCTGAAGCCGGAGGCGCTCAGCGACAGAGTTGAAAGTTGTGGCTTTCAGGTTTGTGAGTGAGTGATCACAAGGAAAAAGCATCTCTTTAAAAAGCTGGCAAAACGCCGGAACACACTGTGGTATGAGGCGCGCTGCACGTCTTGGCGCTGAAGCGCCCGTTCCCCTCCTGGGCCGAGATTCTTTTCCCGTGGCCGTATCGTTCTGATTTCACGTGCACCACAGTAACCGATTTTTTGTTTTGTTTTGTTTTCTTGTGGAGTTAACACCAAATAAAAAAGTTAAAAAGCCG EMBV3_23325 GGTCAGGAGAATTCCCAGCTTCAGTCAGCAGTGTGTGTAGGTGACAACCTAGGACATTGT Gene BVV0102_213872 + 0 NULL GK000011.2:98902051-98919232 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16051 CCAGAAGCATGTGAACAGAATATTTGAATCTGTGTACCTCCATACAAGTGTTAGCCTGCC Gene GeneID:617261|ZNF280D:XM_002690858:232_cdna UTR3_Alt 4 NULL GeneID:617261 10 GENE ZNF280D NULL zinc finger protein 280D EMBV3_15365 ATCCAAGTCCCCGGAGGAGATGCGAAAACTCTTCATCCAGCGGGCCAAGAAGATCGACAA Gene GeneID:281783|GLRA1:NM_174321:2_cdna Constitutive 0 NULL GeneID:281783 7 GENE GLRA1 NULL glycine receptor, alpha 1 EMBV3_18313 GAAGCTGCGTCTTGCAAACCACTAAGAAGTCGTGTCTGAACAAGGAGTGAAGGCCTCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13254 TCTCTGCCATGGAGGCAAAATAGCTGGAAAGGGTACAGTGAAAACGTGATGAGGAAGCCC Gene GeneID:532050|PPM1E:XM_002695602:171_cdna Constitutive 0 NULL GeneID:532050 19 GENE PPM1E NULL protein phosphatase 1E (PP2C domain containing) EMBV3_20706 GAACTTCCTTTGATAGAAATGAGTCTGTTTCAGCTTTTCTACCCCAGCGCACCTGAGGGA Gene GeneID:767921|MGC127989:XM_002697765:304_cdna UTR3_Alt 1 NULL GeneID:767921 24 GENE MGC127989 NULL hypothetical protein MGC127989 EMBV3_24763 GTAAATCCTTTGAACAAGTCAGTGGTGTCTCAGTGCCGCATAACCCGTCATCTGCTGTCG Gene GeneID:540584|LOC540584:XM_002686713:56_cdna Constitutive 1 NULL GeneID:540584 4 GENE LOC540584 NULL similar to family with sequence similarity 126, member A EMBV3_03397 AGGAGCTGGGGCTGCGGCTGCTGTATGCGGGCTGTGCTGAGACCTTGTACCATTCAGTTC Variant GeneID:509150|ETHE1:NM_001034344:160_cdna 270^548 3 EMBV3_28777 GeneID:509150 18 GENE ETHE1 MGC127386 ethylmalonic encephalopathy 1 EMBV3_36472 GCTAGTAGCTAACATTGCTTCTGGGGAGCAGAAATATACATATGACTTGGCCACTAAGTG Gene GeneID:504481|SC4MOL:NM_001098863:19_cdna Constitutive 3 NULL GeneID:504481 17 GENE SC4MOL NULL sterol-C4-methyl oxidase-like EMBV3_05110 CATCATGGGTGTGGTTTCTTTGGTGTTTCTGACCACCGAGCAACAGCAAAGATTCCATGA Variant GeneID:777773|ARL6IP1:NM_001078157:16_cdna 240^359 2 EMBV3_43541 GeneID:777773 25 GENE ARL6IP1 MGC139614 ADP-ribosylation factor-like 6 interacting protein 1 EMBV3_02441 GTGTCTAGTTTGCCCACGCCCAGCGACATCTTGGTGTCCTACTCCACCTTCCCAGGCTTT Gene GeneID:100140945|CASP9:XM_002694144:529_cdna UTR3_Alt 2 NULL GeneID:100140945 16 GENE CASP9 NULL caspase 9, apoptosis-related cysteine peptidase EMBV3_01590 TATTCCTGGCCTCACTGATACAACTGTGGCTCATCACTTGGGGTTAGCAGAAGAGCTAGC Gene GeneID:783533|LOC783533:XM_002687814:102_cdna Constitutive 0 NULL GeneID:783533 5 GENE LOC783533 NULL similar to Ribosomal protein S6 EMBV3_15791 AGTACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCAGCTATG Gene GeneID:281450|RELN:XM_002686760:52_cdna Constitutive 2 NULL GeneID:281450 4 GENE RELN MGC152334 reelin EMBV3_37938 GAGAGGCGAGAAATTGCTGAAGTCAATAAAAAAACTCAAACAGAAGAATCAACAGCTGAA Variant GeneID:613879|MED30:NM_001079618:79_cdna 582^696 2 EMBV3_15058 GeneID:613879 14 GENE MED30 THRAP6 Trap25 mediator complex subunit 30 EMBV3_12116 CAACAGCTGCAGAGTGGACGTCTTCACTAATCTGGGCTACCGAGCTTTCTCTCTGTCCTT Gene GeneID:100125940|THOC6:NM_001105503:7_cdna Constitutive 0 NULL GeneID:100125940 25 GENE THOC6 MGC142655 THO complex 6 homolog (Drosophila) EMBV3_20111 GCTCTTGAGACCTTGAGCTGGGTCAGAGGAGACCCCCATCAACACGCGAAGGAACAGGTT Gene BVV0101_066799 + 0 NULL GK000022.2:59103702-59166906 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11087 CTCTACAACCTGAAAGTGAGCCCGGGTGTCTCGGATGTAGCCTTCCAGCGCTCCTTCACA Gene GeneID:540809|FSTL4:XM_002689187:23_cdna Constitutive 0 NULL GeneID:540809 7 GENE FSTL4 NULL follistatin-like 4 EMBV3_03155 CTTCTAACTGAGCTCCATGACTCCATTCCCTTTCTGGCTGCAATCTGTCTTCCATGCACC Gene BVV0102_296153 + 0 NULL GK000003.2:9765433-9848245 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175416 1 XLOC_105197 NonCoding TCONS_00175416 XLOC_105197 NonCoding NonCoding - 3:9792094-9793238 - TSS130175 1144 3 TCONS_00175416_4 99 0.227272727272727 1 0 0 0 0 0 0 0 0 2.06808514133943e-05 0 0 0 0 0 3.70069741151788e-05 0 0.00140830781907371 0 0.00260997856673841 0 0 0 0 0 0 0 0 0 0 0 0 NM_001083484.1 SMYD1 Bos taurus SET and MYND domain containing 1 (SMYD1), mRNA. 2e-28 131 83.85 0.11013986013986 0 noncoding 0 0 0 0 -0.146174512626623 0.370504934119161 NA NA AGTACAGGGTAAGATTCCGGTCCTGTGTGGTCCGTGTAAGCCCCACCTCTGTGCCGAGTGCGATGTCTTCCGAGGAATATTGCAGCTGGCCTTCATCCAGGCTTGGGCGTGAAGATGGAAGTCAGAGTGCAGCAAGGCGGAGCTGGAGCAGAGGTCCTGGGCAGCAGGGAACGTGGGTGTGGCTCAATCTTGGAGAGACGCCCTTTGGGCAGACAGGAAAGGAGAGACTGGGGGTCACCCCACATGGTCCTGTGTTTTCCCCAAGAGTGAACCTCAGGCCATTTCTCCTGCAGAATTGGCAATGTGGGGTTCATCTGTCTGAGCGGGCAGCCTGGGGTGGGGCTCTCTCCCTGTAGACTCTCTCTAGACTCTCTGTTCTAGTCCTGGCTCTGCCACTTCCCAGCTGTGTGGCCTTGGGGAAGGAATCTGACCTTTCTGGGTTTCCTCCTGTGAAATGGAGATATGACCTCTGTATGGTTGAGAGATCAAAGTGAGACCTTGCTTCCAATCCACACCCTCAACTCCTAGATGGCCAGTTATAAATGTAACTGAGATGATAAACAGAAAGAACGCAATAAGGGAGCTGGGATATGGCAACTGCTCAACAAATGTTAATTCCCTCCCATGTGACTCAAATTTCAAACACAGCTTGTTCCCAACTCCCCTCAAGTCGCTCCTCCACCCCACCCACGACCTCACACTTGCACCATCGGCACTTCCTTTATCAGGGTGTGGTACCAAGGGCTGCCCAGCCCAGAGACTGGAGTCATCTTCTCCTTTTGCCCTATGTCTCCTGGCTTCCCAAGTCCCATCTACTCTGTCTCTAGCTCATATCAGTCTTTCTCAGCATTAGCGCTAACACCATCTCAACCATGGTGGCGGCAAAGACTTAAAGACTTCTAACTGAGCTCCATGACTCCATTCCCTTTCTGGCTGCAATCTGTCTTCCATGCACCTGATTAAAGTACAAAGCTAGGGAATTCCCTGGTGGCCCACTGGCTAAGACCCTGTGCTCCCAATGCAGGGGGCCGGGGGGTTCGATCCCTGGTCAGGGAACTAGATTCCACTGCAACTAAGAGTTTGCATGCCTCTACTAAAGAACTCACGTGCCACAACTAAAAACCTGGTGCAGACAAGTCCATAA TCONS_00168386 . 3' 26663 TCONS_00168386 . 3' 27806 EMBV3_30708 AGAAGAAGCTGCCGCTTTTCCTGAAGTTACCAAAACCAATTCCTACTCCCAAAAAGGGTT Variant GeneID:522917|RIOK3:NM_001075836:25_cdna 323^576 5 EMBV3_18560 GeneID:522917 24 GENE RIOK3 MGC138071 RIO kinase 3 (yeast) EMBV3_09329 TGTGTTTGGGTGTCTTGGGAAGTGGCAGAAGCCTTTCAAGCCACCAGTTTGTGCAGCCAA Gene BVV0102_426818 + 1 EMBV3_09710 GK000019.2:20815215-20828075 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09106 AGACTAGAGATCTGGTAATTCGTCTCCCAAGGCTACTAACTGGAAGTCTGGAGCCCGTGA Gene GeneID:526138|MTERFD1:NM_001075881:54_cdna Constitutive 0 NULL GeneID:526138 14 GENE MTERFD1 MGC139163 MTERF domain containing 1 EMBV3_18100 TCTTGGTTCAGTGAGGTGTCGACCATGAGAAGGCTGCTTTGATTATGCAGGTACTTCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18179 GCACGCGACGGCGACGGAGCCGTGGGGACGAATTATTTGTCAGGGAAAATCATGAGTTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34920 TCTAATGGAGCCGCAGAGCGAGAGACATTTGAGACCCCAGCCCAAATAAGAGGGAGGATC Gene BVV0102_193114 + 0 NULL GK000007.2:54759290-54857281 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26901 TCCTTTCCCTCAAGTGATTTTGCGAAACCCCCTTCACCTTACAGCTTGCTTAAATATTCC Gene GeneID:281793|GNAS:NM_181021:727_cdna Constitutive 2 NULL GeneID:281793 13 GENE GNAS GNAS1 MGC148689 MGC152036 GNAS complex locus EMBV3_34252 AGGTCATCCAGGACATGGGAGCCAGCGAAAGTACTGATGAAGCTGGAAGTGAAGATAAGG Gene GeneID:100138414|LOC100138414:XR_083722:121_cdna Constitutive 0 NULL GeneID:100138414 7 PSEUDO LOC100138414 NULL similar to Tigger transposable element-derived protein 6 EMBV3_41603 TTTCTTTCCATTTAGAAATGGATGCAAAAAGTCATAAATATGAACCTACATCTACCCTCT Variant GeneID:533681|TMEM156:NM_001083469:32_cdna 657^776 1 EMBV3_35951 GeneID:533681 6 GENE TMEM156 MGC140448 transmembrane protein 156 EMBV3_34728 AAAACCAAAGAAAAGGAGAGGGAAGAACAGGCTGGGGGCTCCTCGGTGGCGTCGGCTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34888 TGTTTTATTCAGTGGACATACTGAGGACTGAGGCCAAGAAGACAGCCTCTCAGACAGCTC Gene BVV0102_328758 + 0 NULL GK000001.2:150293896-150307576 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005657 TCONS_00005658 1 XLOC_001334 NonCoding TCONS_00005658 XLOC_001334 NonCoding NonCoding - 1:150303777-150307367 - TSS2806 2577 4 TCONS_00005658_1 57 0.617772603802871 2 0.282529952633045 3.16970694839409e-05 0 9.34217816145032e-05 4.35288723629793e-05 2.68384296260671e-05 0 0 0 4.48997739149572e-05 0 0 8.33024671480524e-06 4.44235201285537e-05 0 6.47715717123497e-05 0.00103064588718616 0.000615635657899841 0.000877756375180518 6.96088589180507e-07 9.84289253410996e-05 5.89360906819971e-07 0.000253952931618497 3.4185097387827e-07 0.000533485994839871 5.51492190498062e-05 2.78299186987419e-08 3.07125726430819e-05 5.21815691678577e-05 4.89765888028672e-05 3.50168685911889e-05 XR_228921.1 LOC101903402 PREDICTED: Bos taurus uncharacterized LOC101903402 (LOC101903402), 0.0 982 100.00 0.210710128055879 0 noncoding 0 0 0 0 CCGGGCGGGGGCCCTGCAGAGTAAGGCGCATGCGTAAGGCTCAACCTGGTGACTGTAGTAACTGAACCTACAGGCTTTGCCAAACAGTAATCGGTATTTTGTTGTTCACTCGCTCAGTCGTATCCGACTCTTCACGACCCCATGGACTGCAGCACACCAGGCGTCCCTGTTCATCACCATCCCCTGGAGTTTGCTCAAACTCATGTCCATTGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCCGCCTTCAATCTTCTCCAACATCAGGATCTTTTCCACTTGAGGTCCCCAAGTTTGAAGACAGGTGCCATGGGTGTTGGTGACCCAAAAAGGTGCACTTGAAGTGCTTGACTGGGCTGGACGTGAATTACACTGAAGAAAGCCGTCTCATGCCCGCCAGTGTCATCATGTTGTGAAACTTTAATGAGATGAGGTGACTCAGATGGTGAAGAATCTGCCTGCAAGACAGGAGACCTGGGTTCAAACCCTGGGTAGGGAAGATCCCCTGGAGAAGAGAATGGCAACACACTCCAGTATTCTCCCCTGGAGAATCCCATGGACGGAGAAGCCTGGTGGGCTACAGTCTATGGGGTCGCAAAGAGTTGGATATGACTGAGTGACTAACACTTAATGAGATGAAGACTTGTACTTTGGGGATTTGCCTAAAAAATTATCACCCTTCATCCTGATAAACAGAATCCTTTCTCATATGCAGTTTAGTCCTTTTGCTCCTGTACATGTATCTCTATTGACCTTGAGCTGGGTCCTGGGCTAATTAGTAGGATGTCGGACACGACTGAGCGTCTTCACTCTCACTTTTCACTTTGATGCATTGGAGAAGGAAATAGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGCGCCTGGTGGGCTTCCATCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGAAATGAATAAGTTGGGACTTCCTTGGTGGCCCAGGGGTTACGCCTCTGAGATTCCTCTGTAGGGGGAGATTCCTCTGTAGGGGGAGATTCCGCTGTAGGGGGCGGGAGTTCCATCCTGGGTGGGAAACTAAGATCCTGCTTGTCAAGCAGCCAAAGAAAAATGAAAGAAATTAATAAGTCAAGGGCTGTCAGATACTGCCCTTAAATAAAGAGTTAAAAGGTTTTTCTTAAAATATTCACTGCGTTTTTTAAAAAATACTTATTTGGCTATGCCAGGGTCTGTCTTGTGGCATGCGGGATCTTTAGTCACAGCATGTGGGATCTAGTTCCCTGACCGGGGATGAAACCCAGGCCTCTGCATTGGGATCGCAGAGTCCTAGCCACAGGACCACCAGGGAAGTCCTCATTGCATCTTTATAATTGTAAAGGAAATACATTTGCCTTGTAAAATTCAGATAATATGGAAATATAAAACAACACTTACCCTAATCCCTTTACGGGAACATATGAATTTGGTGTACATTACTCCATATTTACTATACGCTAAATACTATTTACAGTATGGAACTAGACCTTACATACTCCTCTGCAGCTCATGTTTTTGTTTTATTTAATTATTTCAGTTTGAGATTTCTAAGTGCCCAAATAGTTTTGAATAAATGAACAAAGGAGGAAATGTTAAAAACAAACAGGACTTTCCCGGTGGTCCAGTGGTTAAGAATCTGCCTGCCAATGCAGGGGACGATCCCTGGTCCTGGAAGATCCCAAATGCCGCAAGACAGCTAGCCCACGTGGTGTCCTAATGCCCATGCTCTGAAATAAGAGAAGCCACTGCAATGAGAAGCCCAAGTACTGCAATTAGAGAGTAGCCCCTGCTCACCACAATGAGAGAAAACCTGCACACAGCAACCAAGATCCAACACGGCCAAAAATAAATAAATACAATCAAAAATAACAACAAAAAAACCTGTGCTCTGTTGTTACCCTTACTATTGACCACTGGGTTCTCAACTGAAAAAAAAATGCACAATCTAAAAGTTAAGAATTATGTTTTATTCAGTGGACATACTGAGGACTGAGGCCAAGAAGACAGCCTCTCAGACAGCTCTGAGGGACTGTTCTGAAGATGTAACGGTGGAGCTAGGATAGGGCTTTTTGCAGAACACCTAGGTAGTCAGAGTGTCAAAAGATTACAGTTAATCGACAAAGGATGAGATGGTTGGATGGCATTGCCGACTTGATGGACATGAGTTTGAGCAAGCTCTGGGAATTGGTGATGGACGGGGAAGCCTGGCATGCTGCAGTCCTTGGGGTCGCAAAGAGTCAGACACGACTGAGCGACTGAACTGAAAGAAAACCAATCATCTCAAGTTAGTGAATTTAGTGCTTTTCTTGATATGAGAAGAGGCAAGAGTCTGGGCTTATTGAAATCAACCCTTTGATGTGCACCTTAACTATTTAGAGCCAGTATCCTATTTTTCCCCATCCTGAATCCCCTCAAGGTGGGCAGTGGCTAATGATTTGATGGCCGCAACATCCTTCCTTTACTGATACAGCAGGTAACATTCTTTGTCCACAGGATAAATGGCATGTGAAACAC TCONS_00002640 r 5' 1464 TCONS_00002640 r 5' 155 EMBV3_13300 CCTCTTCTTGATATCTTCTGCTTCTGTTAGGTCCATCCATTTATGTCCTTTATCGAGCCC Gene BVT0101_071894 - 1 EMBV3_38043 GK000005.2:59142180-59158472 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04891 TTGCGCTATGCCACTGTGCTCACTAACGAAGTCATCGCTGGAATGGGTTTAGCAGTGACT Gene GeneID:508808|LOC508808:XM_002693215:426_cdna Constitutive 0 NULL GeneID:508808 15 GENE LOC508808 NULL similar to olfactory receptor, family 51, subfamily I, member 2 (predicted) EMBV3_00901 CTACATTGATCCTTCCTTTCACTCAGCTTCCTTCCACCATGCCCAAAGCATTCCTGCTGC Gene GeneID:100139826|LOC100139826:XM_002691428:89_cdna Constitutive 0 NULL GeneID:100139826 11 GENE LOC100139826 NULL similar to IIDS6411 EMBV3_36237 CCTCCCCCAAATCACTTAACCCAGGCCCAAATTCCATACTAAGCCTTTTTAACCACCTCC Gene BVT0101_070708 + 1 EMBV3_35988 GK000025.2:35173862-35186321 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147017 TCONS_00147018 1 XLOC_089269 Coding TCONS_00147017 XLOC_089269 Coding Coding PRKRIP1 25:35145056-35175705 j TSS109795 5451 2 TCONS_00147017_2 144 0.273160887910475 6 0.822337509788567 0.00158886557030902 0.000128065156208757 0.000109712613958994 0.000285807154461923 0.000658692214998767 0.000228217118696412 0.000127942994573205 0.000465078653224394 0.000234295956369006 2.91649618315545e-32 2.29120584380445e-06 1.41492008452797e-05 2.91829532380348e-10 0.000382024526561904 3.06128051250253e-08 1.1169424417313e-19 5.24859022637608e-16 2.05985003379587e-24 1.32701022231363e-08 0.000852848455911459 8.22196299787196e-08 1.61177242630015e-21 1.96985114537816e-12 3.13311921648805e-05 0.00021961114205948 0.000747931656002273 0.000201078789785447 1.82001397614867e-47 2.8659167724127e-05 3.40589071901626e-06 NM_001079641.2 PRKRIP1 Bos taurus PRKR interacting protein 1 (IL11 inducible) (PRKRIP1), 0.0 1600 99.12 0.165657677490369 NM_024653.3 PRKRIP1 Homo sapiens PRKR interacting protein 1 (IL11 inducible) (PRKRIP1), 0.0 728 87.42 0.107686662997615 TCONS_00147017_4 sp|Q2KIT1|PKRI1_BOVIN PKRI1_BOVIN PRKR-interacting protein 1; 1e-90 265 99.24 0.984848484848485 1 coding 0 0 0 0 0.00833376940026576 0.972260835396551 -0.00727475777609607 0.900990621824723 CAGCCAGCAGCTGTCTGCCAAGCACCAGCTCTGGGCCAGACCCTGAGCTGGGGTATCAGGGACATGGCTGCCCTCTTAGCTCTGTAACTGTCTGTTCATCTACTGTGGTGTGCACTTTCATTCATGGAGGATCCATTTCTTTACTGAGTGTTCATTCATTCTTTCTCATACTCACTAACTTCCTCATTCACTCATCCATCCATCACTAGGTTATCTCAATTGCATATTCATTCATTCTTTACTTTTTCAGACTCCTTTCCTTCCTCTCTCCCTCATTCCTGTGTTCTGCAAGCATTCTAAAAGCACCACTCTAAGCCAGAATTAGATGCTGGGTTTCTGGCACAACCCTCTCCCCAGACTTCTAGGTAGACAGACGGTGAGGACACCCTGTGACTGCCACATGCCAGCCATCGGGACTCAGAGCAGGGGGAGCACCAAGAAGGGAGCAACTGACTGCCTGGAGGAGGAGGCTGGGTCGGGGCAATCAGAGAAGGCTTCCTAGAGGAGGTAGCATTTAAACCACACTAAGCAGGGTGCAGGGCTTCCCAGGTGGTACTAGTGGTAAAGAACCCTAGAGCCAGTGTAAGAGATGTAAGAGGTGCTAGTTTGATCCCTGGGTTGGGAAGATCCCCTGAAGGGAGGGCATGGCAACCCAGTTCAGTATTTTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGAGGGCTACAATCCATGGGGTTGCAGAGTCAGGCATGACTTAGCAACTAAACAACGAGGAGCACACCTGTAGTTGAACAAATTGAGTTTATCGCCTCAGTTTGAGAAGGAAGACTGCATTTACCTCAGTAAGACAGTGTTTAGGGGATTCCCTGGCGGTCCCCTGGTTGGGACTCCACACTAGAGTTTAATCCTTGGTCAGGGAACTAAGAGCCTGCAAGCTGCACTAATGGCCAAAAAGAAGGGTGGGGAGGTGGTTAAAAAGGCTTAGTATGGAATTTGGGCCTGGGTTAAGTGATTTGGGGGAGGATTTGAGTAAATGGGCTTTTACTCTGGAATAGATGTTAGGAATCAGGGACAATTTTATGATTGAAAGCCTTAAATATTTAAAGTCTAACCGGATAAAGAAGCAGCGGTTACTCATATTAGTCAGAATGGGGGAAACGTTTGGTCTTTTTCTTGTTCCAACGATATTCTTGTTTTCATCCGACTTTAAACGTGATTACGGAGCAGTCTTCTTTATGCCTTGCGACATCATGGCCCTAGAATGGCTTTGCACGACAGTGGTGTTTAGGAAATTGTCTATGTCCAACAGGAGAATCCCAAGGTCTAGCTGTGAGTGCCAGGCCAGCTCCCAGATGCAAGGGGCAGCGCTCCTCTTTCTCTTAGGAAAGGCCCGTTCACGCGACCGAGGTGTATCTGCTGGGTGCCAGGCGCAGAGTGATTCGAAGCGGGCAAAAGAGATACGGCCCCAGTCCTCCGGGAGCCCACATTGACGTCGGTGCTGTCTTAAACAGATCGTCAGCAAAGGCAGAGGGAGTGGACCAGACCCAAGGAACAAAGGCCCGGGTGAGGGGGTGGGGGGTGTCGAGAGAGTTAGCAGGGTGGTGGGCGAAGCCACAACTCGCGCCGGGACTGCAGAGGTCGGCGGGGGCCAGAGCACACAGGGCCACCTCTCCCCCAGGAACGTGGGCGTTCGCTGCGCTGATCTGCTCAGAAACAGGGAAAAGAAATCAAGCCGCTTTAATCAAAATAACCCACCCGGGCCTCGAGCTTATGAATATTCAGCAGCCTGCGGGCAACTCCGCTCCCGCCGCGCCCACCTAGGAGACTGCGGTTGCGTCACTGGCGCGCGACTCTGTCGTCACACACGCGCGCCGCCGCCCGCCTGGGAAGGCAGCTGTCATGGCGAGCTCGGCGGCCTCTTCTGTGAGGCCGCCGAGGCCCAAGAAGGAGCCGCAGGCGCTCATCATCCCCAAGAATGCCGCGGAGGAGCAGAAGCTCAAGTTGGAACGGCTCATGAAGAACCCGGATAAAGCAGTTCCAATTCCAGAAAAAATGAGTGAATGGGCACCTCGACCTCCCCCAGAATTTGTCCGAGATGTAATGGGTTCAAGCGCTGGGGCTGGCAGCGGAGAATTCCACGTGTACAGGCATCTGCGCCGGAGAGAGTACCAGCGCCAGGACTACATGGATGCCATGGCTGAGAAGCAAAAATTGGATGCAGAGTTTCAGAAGAGGCTGGAAAGGAATAAAATTGCTGCAGAGGAGCAGACTGCAAAGCGTCGGAAAAAGCGAAGTTGAAAGAGAAGAAATTACTGGCAAAGAAGATGAAACTTGAACAGAAGAAGCAAAGTGAAGCATCCAGTGAGACCCAGGAGCAGCCATCCAGTGGCTCCGAGGAGGCATCTGGGACGGAGGACGAGGAGGAGGATGCACCCAGCTTCGTCACGGGGCGATGACGGGGCTGGCCCCGCAGCTGTCTGAGCCTGGCCCATCCTTGGCCCGGGGCTCTGAATGCCCTCCCAAAGCCTCATGGAGAGACGCGGTGGGAGCTGCTCCCGAAGACTCTCAGCCCCACTGCGGGCAGGACTCAGCCGGCAGGGAGAGGACTAGCCTCCTGGACGCTCGAGGGCGCTGCCAAGTGGGGTCCGTTAATGTCCTTGTTGAAAGGGGGGAACCTGGGGCCTGCTCTCACATAAGTGGACGGTGACGAGCTTGGCGCTGGTTTCTGTGAAACGAATGTTTAGTAAAGAACAGAAAAACTCCAGATTTTGTTCAGATCTGTGACATGCTAATTACAGAAGCTGCAGAGAGGCTGTGACGTGACACAACGGAGCGGGCTGGTCCCAGACTCAGGAGACGGCCTCGGCTCTGGAAGGAACACTCACTGCAGGGCGTGGGGCCTCCGTTTCCTTCAGCTGAGGGTGCAGACTGCGCCCCAGGACTTATCTCCTCTCCCCGCATCCCAGCAGCTGCAGAGGGAGACCTGGGACTGAACCCGGGGCAGAGCCGGCAGAGAGACCTGGCGTGTGAGGAGGACTTCAGAAAACCAGCTGGTCATAGAAAGTCAGCAGGTAGAGGAGCCAGGCTGGGCTGGACCAGAGCAGGTGGCCCAGGGGACCCCGCTGGGCCACTAGAGAAAGTTTGATATAATCAAGGAAATAGTGGTTTCGAGTGAAGGGAAATGAGGAAACATCTTAGGTTTCTTGATTCCCTGGCTCCATCCTGAGCCATGTGGCGTCTGTGATAACGTCTGTCTTTCCACAGTTTAAGTCACAGGAAGTTTCTTTCCCAGGAAGCTGAAATGGAAAGTCAGCCCTCATAATTAGCACACAGCCTGACTGTCTGTTTTGAAAGTGGTGTTTCTCTTTCATTAGGGACTGACCGTTAGTTCTGTGTCCTCCTGTCTTTGAACTGTTGGTTTCCTTTGTCCCCTCAAAGTGTGTGTGTCAGAGCTCGTGCTTCGAGCCTGGAGCCCTGGGATTGAGTCCTGGCCCTGCCTCTGATGGGACAGAGAACTCCGGGCAAGTCCCTGCCCGGTGCCCCCAGCCAGGAGCTCGGAGCTTCCACAGCAGATGTGTGCCGGGCAGGTGGGCAGTGACTAGACTGGTGCTTGTCTTTACCTTTACTGGATGTCAGAAGACGCTGCTCAGGGAGATGCCCTCCAGCAGTTCCTGGTGATGTGCAGTGGGCTTTTAGTGCCTTAGGCTGAATGATTTGCAGGCTTTCTGTTACCAGCGGGAAGCTTGGATCCACTCTCCCAATCCACTCAGCAGAACCAGGCGACTGACACCGTACTTTGTGTTACCACAGCCAAGTTCACTGCAGGGCATCAAGCAAGGAGAACAGGCCAGCTGGTGCTCAAAAGCCCAAAAGACTGCGAGGGAGAGGGGCACAGGGTGCGCCGTCAGCTCATGCACCATTCTGATTGGTTGATGGTGAGCAACTGGGTGATGTCTGGGGACTCTTAGCTTTCTGGTTCCAGCCCGTCTGGAGTCTACGTTGCTGGTGGTCAGCAGGCAGGTAACTTCTTTCACCTCGTGGGAAATCTTAATACCTGCAAAACAACTCAAGGGTGTGGTTCAGGACACTACTTATAGCCCGTGAGGAGGAACTGGATGGCCTTGACTTTGTTTGTGGCTGAATTATTTGTCTTTCTTGACTGCTTTCCTTTGTGTCTTCATTTTCTCATTTGTAATTAAATTTGTGCAAGAATGTGGGAGAAAGGCATTGACTTTCTTTTCATTTTCAAATTCTTTTCATTTTTAAAAGAATTCTCAAGTTGCTTGGTGCCAGTACTTTGTATTATGAAAACATTACCTCTCTGATGGCTTTGTCACAGCACCTGGACAAACGCTTGAAAATCAGACACAGTACAATGAGGATAGAGATCCAAACGCACCTGCCGTATACCCAGAGTCTGTTATAGATGGCAACCAGGAAAATCAGTTTTGGGGGTGAGTCATTTTTATATAAATTCTGTAACCAAGGAGTCTTTTGAATTAACTCTATTTGGGTTTCAGCTTCTCCAGGGCTATTTTTTTAAATATATATGTGTGTATATATATATATATATATATATATATATATATATATAAAACAGGAGCTGTGGGCCACTGCATGTCTCTTTTGTGGTTAAAATGTAAAGCAGTTTTATCATCTGGTACTTTTCTGCCGAAAGAATCTAGCACCTTCTGCCGGGAAGCTACAGCCTGAGCTGTCTTGCTAATTACTGCAGTAAGCTCCCTACATACAAACCTGCACATTTTGAACTTTGAAAGATGTAAATGTGTTCCATCCACCTGGGGCATGAGGGAAGCTGCACCTGCCCTCCGTCTCCTGTTGCTGACGATCCTTCAGCTCCGTCTCCCTCCTCCTGTCGGTGACTCTTCTTAGCTGCTCACTCAATGCCAGCTGTTGTATGACTGTACTTTTCAAGGTACTGTACTGTAAGATTAAAAATGTTTTTTCTGTTTCTATATTGTGTGAAGAGCATGAACCTAGCGCAGTGCTGTAGAGCGGCTGTGTCGGTTGGGCACCTAGACTAACTTTGTTGGACTTAGGAACTCATTTATATGTAGGGGACTCCCTGTATTCCTAAACAGAGACACTTCATGGCAGCTGAGAGTGTCCTTGAGTCTGATACAGTTCAGAAAGGTCAGGTTCTCAGTAATGCAGGAACATGTCTGAACCCATGTCCGTAATAGGCACCCAGGTCCATACTGAATGTCTGAACTACGGTTACGTCATTTTGATTTTGTAAATACATTCTTTAAAGTAGATGTATGCAGTGTATGTTTGACGAACTAGAACAGCCTGTATAAGGCAAAATACTTCTCTATACCTGGGGGTGTGAAAGTTGCCATTATTTTCCTCCTTTTGTTTGTAAATCTTTCAGGAGAAAGCACTGATGATTCAAAATACTTGTCCCTCAATGCTATAGGCCTCCTTTTATATATATTTATATTTA EMBV3_08147 AAGTTGTGAATATCAAGGCCAAGGTGAACCGAGCCTTCAACTCTAGCATGGAGGTGGGCA Gene GeneID:533609|ACOT11:NM_001103275:82_cdna UTR3_Alt 2 NULL GeneID:533609 3 GENE ACOT11 MGC166303 acyl-CoA thioesterase 11 EMBV3_22214 GAAGCCTACGTCAAATGTCAAGAAAAAGTCAGCCAGCTGTACATGAATCCAAAGGCCTGG Gene GeneID:505472|PYGL:NM_001075203:37_cdna Constitutive 0 NULL GeneID:505472 10 GENE PYGL MGC140522 phosphorylase, glycogen, liver EMBV3_32582 GTTCTTGGACTCCCCTGAACAAAAAGGCTGGCAGACACAGGTGACGGAGTTCAAGGCCCT Gene GeneID:538960|CCDC13:XM_002696927:468_cdna Constitutive 0 NULL GeneID:538960 22 GENE CCDC13 NULL coiled-coil domain containing 13 EMBV3_39483 TGTGACACTGAGTAGGTGGAGGAGGGCATGGGGATTGGGGGTGAGTCAGTTACTATTTTA Gene GeneID:616065|LOC616065:XM_002694113:439_cdna Constitutive 1 NULL GeneID:616065 16 GENE LOC616065 NULL similar to 60S ribosomal protein L22 (Heparin binding protein HBp15) EMBV3_11987 GGATTTAAGTTCCCTGACCAAGAATCAAGTCCAGGCCCTTGGCAATGAGAGCTCAGAGTC Gene BVV0102_103072 + 0 NULL GK000001.2:130518101-130554555 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03423 TGGTGCTAGACAAGGACATGGCCGAGGAGGCTGGTGAACATCGGCTCCTCCTACAACTAT Variant GeneID:614912|KCTD17:NM_001105437:29_cdna 287^474 1 EMBV3_19800 GeneID:614912 5 GENE KCTD17 NULL potassium channel tetramerisation domain containing 17 EMBV3_20471 TCATGACAGCCTTAGAGCCAATAAGAAGAGCTTGTGTTACTCTATCCGTGTTACTGTGTC Gene GeneID:521240|WDR75:NM_001102062:30_cdna Constitutive 0 NULL GeneID:521240 2 GENE WDR75 MGC152586 WD repeat domain 75 EMBV3_22606 TTTATGGGGGGTGTATGAGTGTTGGGGGTAGGTAGGTCCTCATTTCTGTTAGTGGAGGGG Gene GeneID:508153|LOC508153:NM_001100322:2_cdna Constitutive 1 NULL GeneID:508153 21 GENE LOC508153 NULL similar to Myeloid-associated differentiation marker EMBV3_38595 GCCCTCTGCCCCAGTAATTCTCCTTCTGGGAATAAGCCTGAAGCAATAATCCTAAGTGCC Gene BVV0102_183455 + 0 NULL GK000002.2:135701198-135784597 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112970 1 XLOC_068865 NonCoding TCONS_00112970 XLOC_068865 NonCoding NonCoding - 2:135762135-135763349 - TSS84591 1214 2 TCONS_00112970_2 75 0.14827018121911 1 0 0 0 0 0 0 0 0 0 0 9.82872740873157e-05 1.88565414153269e-06 0 0 0 0 0.000130535303039178 0 0 0 0 0 6.11257469962399e-06 7.55687125328017e-06 1.38094239495498e-05 0 0 0 0 3.99885323204142e-06 0 XM_005201677.1 PLD1 PREDICTED: Bos taurus phospholipase D1, phosphatidylcholine-specific (PLD1), transcript variant X1, mRNA. 3e-14 84.2 83.53 0.0675453047775947 0 noncoding AGTCCTCTTGCCTGGAGAGTCCCGTGGGCAGAGGGGCCTGGCAGCTCCAGTCCACGGGTCACAGAGAGTCGGACACGGCGGGGGGACTGAGCTCACACTCAGTGATGACGCCAGGAACGCGTGCTGCTCTGGCAGGGTCTGCAGCATCCTTGTTCTTTCGGGGAGCAGTCTGCACCAGGAGCCTTAAAAATAGGCATGCCCTCTGCCCCAGTAATTCTCCTTCTGGGAATAAGCCTGAAACAATAATCCTAAGTGCCAACAAGCTCTGTGATTTTGTTTAGTCACTGATTCAGAACTTGTTTTTAACACATGCTTGAAATGGTTTGGGAAGGAGCCGTTCTCTAGTGCAAGGCGTAGTAAGGATTGAAGGAAGTCTGTGTTTCAGATTGAGGTTCTTATTTCAGTTTGACTCCTAAGACGGGGAGGTTTCCCAGGCTTCTCTGAGTCTGAGCAGAGCTGCTGACCAGAACTCCGATGTCCCCGCCCCTGGTGCTGGCCTTACGTGTACCCCCTGGAGGAACCTAGGGAGCCCTCTTGCAGGCGGGTGTTTTGCCTGAAGCACCCTCCTTGGCCCCTGGCACGGCCAGGCCGGCAGGTGGAAAGCTGGGAATGCCCCCAGCCCGTGGTACCCTGGGTTGAGGGCCGTGCCCAGCAAAGCAAGTTTGACCTGGGCGCCTCTCCAAAGGCTTCTCCTCTTCACTTTCACGCCCAAACCCACGGTTCTCCAGGTTCCCAGGACCCAGGGTGTCCTGGGCTGAGCTGGGTGGGAGGAAGGCAGTGGTTTCGGGAAGCTGATTGGCTGCAGAGGAGGTGGCAAGCCAGGACCCAGGGTCCGGAGGGTGGGGGACTCCCGGGGATGCAGTGCCCCTGGGGGACTCTCCTGGGAGGTTTCACCAGGGCCTCAGGAGGAGGCCAAGGTGCGGGGTCCCAGCCCCGGGACCGCCAGGGAAGTCCCTCTGCTGAAACTGTTGTGCGACTTCTGAGAACTCCGTTCAGCTCTCTGAGCATCAGAAAAACAGCAGTGGGGACGATAATAAGACCTGCTCCTCGGACTGTTCTGAAGATGATGTCACAGAATTTGTGAAGCACCTGATGGGGTTTTGAAACTTTTGGACAGACACGTGAGAAATTGCTCATTATTTTCCAGAAGCGGTAGAGTGTGCGGTAGAGATCACTGACGCGGAACCAGTGGGACCTGTGTCCTGATCCCGCAT TCONS_00104231 . 5' 15784 TCONS_00104231 . 5' 15784 EMBV3_13291 ATACGTTTCTGGAACATTACGATTTGGAATATTCCAGTGCTGAATATTCAAATGAAACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29065 GAAAAAGGGCTCCAAGAAGGCAGTGACCAAGGCCCAGAAGAAAGATGGGAAGAAGCGCAA Gene GeneID:787269|LOC787269:XM_002697520:245_cdna Constitutive 0 NULL GeneID:787269 23 GENE LOC787269 NULL similar to histone cluster 1, H2bd EMBV3_02700 TGAGCGCTACTCTTCGCTCGAGACCAGCAGGATCAAATCTAAATCGCTGTGGTTTCCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39329 CTTCAGGTGACTCCCCACTCTAACTCCCAATTCTCAAATTAGCCTTTTCGGAGCCTTGCC Gene BVT0102_085942 + 0 NULL GK000015.2:42913327-42970986 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03977 AGATCCTAAAAGGGAATAGCTGACAGGCTTCCAAGGCTCGCATGAGTGTGTGGAGAGCTC Gene BVT0102_293860 - 1 EMBV3_27936 GK000001.2:154575202-154627209 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012096 1 XLOC_007646 NonCoding TCONS_00012096 XLOC_007646 NonCoding NonCoding - 1:154612937-154613576 - TSS9173 639 1 TCONS_00012096_1 60 0.330203442879499 1 0 0 0 0 0 0 0 0 0 0 0 2.50771384467841e-05 5.59575462926522e-06 0 0 0 0 0 0 0 0 0 2.32259621606315e-05 0.000258423122182269 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.143202123713571 0.272830660977901 0.0318859608363351 0.615921556825895 CTCAATCTGATTTAAAAGTATTTTTGAAGATAGATCATTCTGCTTTGCTTCAGCACAGAAAACAAACTGCAATGGGCAAGCCTGGGGAGGGCAGACTGGGGCGAGGCTGCACTGACCCCAGCAGGAGGCAGAGCAGCATAAAGACACACCAAGCGGGCAGGGAGAGACCTGCTGCTTCCACTCTCTGGTCAGGGCTACAGAGCTCTCCACACACTCATGCGAGCCTTGGAAGCCTGTCAGCTATTCCCTTTTAGGATCTGCTTTATTGGTGAGACGTTTGTACATATATGATAATTCAAAAAACCAAAGGTCCTCCAATGTCAGCTTGATTTGGGGGCTGTCATAAAATTCAAGTTCAGTTGTATCAGCTTCTAGACAGTGAATTTCGGCTGCCTTTCCACAGAACCACTTAGTAAAAATCAAAGCTTGAGGAGCCATAAATTCTACACTACTATTATTAAATCTGATTCACAGTATTATCATCACATCTGTATTACTAGCACAATGTCAAAGACACATCCTTGTCAATCTGCACCAAAGCTTGTCACTTTCACTATTTGTGTATCACATAAAAGATGGCAGCTTCTAAAGAAAATCTAAAATTCATCATCTGTAATCATCACCTGCAAATAATTCTAT TCONS_00005755 . 5' 14352 TCONS_00005755 . 5' 14352 EMBV3_11070 GGGAGGGATAATGTAGACTCTGGTGTGGCCAAAGATTTGAGTACAAAGGCAACCGTGGTT Gene GeneID:540017|FBN2:XM_002688974:49_cdna Constitutive 2 NULL GeneID:540017 7 GENE FBN2 NULL fibrillin 2 EMBV3_03866 TGGAGATGATGTCGGAGGAAGAGCAGGACGACTGGGCTTGTAGACATTTCCGGATCAACT Gene GeneID:541043|PTPRO:XM_002687771:106_cdna Constitutive 0 NULL GeneID:541043 5 GENE PTPRO NULL protein tyrosine phosphatase, receptor type, O EMBV3_38330 CAGACCACCTTCCTTTAAAATTGACCTCAGAGCCCTGTCGAAAAGTCAAGGAGTGCTTCA Variant GeneID:616552|MGC133736:NM_001080323:20_cdna 248^667 2 EMBV3_28436 GeneID:616552 6 GENE MGC133736 NULL hypothetical LOC616552 EMBV3_05241 ACTTCGAGGTCCACAGAGAGAGCATGATGTCCTCCAAAGCAAGGGTTCAGGGTCAGCAGA Gene GeneID:100138827|ANKRD60:XM_002692269:1596_cdna Constitutive 0 NULL GeneID:100138827 13 GENE ANKRD60 NULL ankyrin repeat domain 60 EMBV3_21095 AATGTTCCGAATTTGTATAAACTCCACTGCGCAGGCACTTACACTCCGGCCATGCCTCCT Gene GeneID:100295590|LOC100295590:XM_002694181:636_cdna Constitutive 0 NULL GeneID:100295590 16 GENE LOC100295590 NULL hypothetical protein LOC100295590 EMBV3_32619 GAAGAGGAGGAAGAGGAAGATGAAGAAGAGTCGGAGTCAGAGGCGAAATCTGTTAAGGTG Gene GeneID:540904|SMARCA2:NM_001099115:8_cdna UTR3_Alt 2 NULL GeneID:540904 8 GENE SMARCA2 MGC148877 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 EMBV3_04773 AACGAAGAAAGTTCGCATGTCATCAGCCACGACAAGACTACCACCCAGGAAGAAGCAGAG Gene GeneID:520057|LOC520057:NM_001079599:31_cdna Constitutive 0 NULL GeneID:520057 X GENE LOC520057 NULL similar to type 1 protein phosphatase inhibitor EMBV3_31130 AAGTGTATTTCTTACTGTACCCCAGCTCCTGTGTAACTGCAGCCTCTGTCAGCAACCTGG Gene BVT0102_017881 + 0 NULL GK000011.2:40744420-42854398 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024776 1 XLOC_014574 Coding TCONS_00024776 XLOC_014574 Coding Coding - 11:42394526-42397400 - TSS18108 2753 1 TCONS_00024776_4 97 0.59498728659644 2 0.0424643230073094 1.91396868832146e-275 1.35757945756346e-60 9.46393598116776e-88 0.000356985099036438 1.01327949671298e-88 3.05608081632179e-51 7.98503765151577e-05 2.93945177482065e-06 5.09112087980732e-06 0 1.18749981572438e-18 0 2.28853908637978e-06 0 5.1873891084038e-227 0 0 0 0.000309918641876918 5.1849721358249e-06 1.3080381370925e-05 0 0 0 0.000383261297460101 1.30695616828909e-05 8.24117539274643e-05 0 0 0 XR_237776.1 MIIP PREDICTED: Bos taurus migration and invasion inhibitory protein (MIIP), transcript variant X11, misc_RNA. 2e-160 571 85.18 0.182709771158736 0 coding 0 0 0 0 -0.311509851768447 0.0956972122342925 0.0419776308943791 0.415766346580046 GTGTTCTGTATAAACACACATATGTACTAATTTGTGTATGTGTATATATGTGGCATGTATGTATATTTAGGTTTAATTATGGGCAAAGAGGACACAAATGTACATATCACCCTCTAAGAAAAGAGTAAATATTCATTTTATCCACTACTGTAACAAAAACAAAAAGCTTTACCCTAAAATATTGAGCTAAATAACAGTCTTTCTCAAATTCTGTGGGGATCAGCTTTCATTAAAGAATACAGCCATATTGCTTGGTGATGTTAATGAGTAGCTCAATCTATGTATCCAAATGTAACTATGCCTTGTGACTCATTTTTGATCCACACACTACATGTTGGAACTCTAATTTTCTTCTGTCTTTTGTGGGAGGTTTTGGGCTGTGTCACTGACTTTCTGGACATTGCTTTCTAGAAAAGCAAGCTCAGGGACTTACGGGCATAAAGGGTTCAGACACAGAATGAGGCCTCTCCTTATGGAAACAATTATGTGACACATTCCACTTGGCTATAGGAAAGCTATAGAAGGGGGAAAGAAACCCCCCTTTGTTTGTGGGAGGGTCTCTGAACACACAGCCTAGGAAGATTGTTTAGCCCAGCTGAAGACGCTCAGGCCCACACTGGGGGCCCTGATTAGTTCTACATTCAAACCTTCAAAGAAGAGATCCTATTGTTTCTTCAACAAAGATTCTTCTGCACCTGCTAGTATCAATACACACTTTCATCAAAGCGTGTTCCCCAAGTCAATAACTGACATCATGATTTTAAACCAAAGTAAATGACCTTGGACAGTAACATTTCCAGGAGTTGAAAGCATGAACAGAGAACCAAACACAAACTCAAACTTTAGGAAAAACAGGGTCAGTATTAAGCACATGTCACAACATGCCACCAAGCCCCATTCCGTAATATGTTAACCCAGAGAAAGTAAAGATTTTTAGATTTTCCCTCAAAATGTTCTTATAATGTTTTCTAGGATTGCTTCTTCTGAAGTCATACACAAGAGGGAAAAATGAAAGAACAACTTCACAGGAGAGTCACCCTTAGCTGCATTTTCTAGTCTTGCTTGTCCACCCAACCACACACCCCATTTGTTCAGAGATAAATCAGAAGAAAGCCCAAATTTTGCAAAAGCATTCATTTGAAATCTTAATTTTTTCCTGTATCATCATTCAGTTAAACCAAAGCATCTGCTTTTATTACTACAACTAGTACTGATGAACAAAAAGGGGGTTTGAATTTCATGAGTCTTTGAGATTTTCACCTTTCACAAATGTATACTAAAGGCCTCCTTAGTCAATATTTTCACACACAGTTGTAATTAATTCAGGTTTTACTTAAGCTAACAAATGTTTCTCCTTCGCAATAGTAGAGTAAGCTAATTCACGAAGTTGCTACTGTTCTCCAGGTTGCTGACAGAGGCTGCAGTTACACAGGAGCTGGGGTACAGTAAGAAATACACTTTGTCCCCCCCATTTCTGGCACAAAGCTCCTAAACCCCTTTCCTGAGTGACAGTGTCACTGGCAAAGCCCATTAACAATTCCTAGGAGATAAAAATGGAATCCGGATAATAAAATAAAATCTAACCTTTTTTTCCTTTGTGCTCTGTCTAGTTTCATTTGCTCACAGGGTGCTGGGTGCAAAGGCCTTATACCGGGCACTTGACTCCTGAGCTCCTGGTTCAAAAATGACTGTGCTGACTTTGCAGTTCCACTGGTCTTATGAAGAAGCTCTGTGCTTAATCCTTGATTCAAAATGGCGGCAACGGGTCATGTGCAGAGATGCTGTGCCCAGCACTGTGGGAGTGAGCACACCTGTGCCAGCCCTGAAGGAACTCCCCTCCTTCCCCACTCCTGTTGTTGTTCAGTCACTGAGTCATATCCAGCTCTTTGCGACCCCATGGACTGTAGCACATCAAGCTTCCCTGTCCTTCATCATCTCCCATGAGGAGTTTGCTCAGTCATGTCCATTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTTTCCTGCCTTCAATCTTTCCCAGGATCAGGGTCTTTTCCAATGAGTCAGCTCTTTACATCAGGTGGCCAAAGGATTGGAATTTCAGCTTCAGCATCAGTCCTTCCAATTAATATTCAGGGTTGATTTCCTTTAGGATCGACTGGTCTGATCTCCTTGCAGTCCAAGGAACTCTCAGGAGTCTTCTCCAGCACCACAGTTCAAAAGCATCAATTCTTTGGTGCTCATCCTTCTTTATGGTCCAGCTCTCACATCCTTACATGACTACTGGAAAAAACATAGCATTTATTATACGGACCTTTGTTGGCAAAGTGATGTCTTTCCTTCTTAATACACTGTCTAGTTTCACTTGCTCACAGGAGGCTGCCTGTGAGGTCTTGTACCCAGCACTGGAGTCCAGACCTCCTGGTGCAAAATGACTTGGCTGACATCTCAGCTCCACCAGTCTTGCAAACAAGTTCTGTGCTTAATACCTCATTTCAAGATGGCAGCAGCGGGCCATGTGCAGAAAATCTACACACAGCATCGCGAGAGTGAGCACACCTGCGCCGGCCCTGACAGCGCTCCCCTCCTCCCCGGGTCCTGAGATCCCTGTAAAGCAGTCCCGCCTGCCTACGGCTTTCGGGAGGAAGACCCTGTTCTACCACCTCTCCGTTCATTCTCTAATAAAAGAATAAACCTATCCTTTCCTTCTGTGCTGAACTAGGTCTCATTCTATCGGCTTCGGTGACAGAGTAGAAGT TCONS_00027694 TCONS_00027695 r 3' 674576 TCONS_00027694 TCONS_00027695 r 3' 677449 EMBV3_04161 AGGATATACAAAATGAGCTGCAAGAAGATGCTCGGACTCGAGGGATGAGCTCCGTGACAC Gene GeneID:767915|C12orf54:NM_001076992:99_cdna Constitutive 1 NULL GeneID:767915 5 GENE C12orf54 MGC127966 chromosome 12 open reading frame 54 ortholog EMBV3_18009 TTGCAGCCGTTCGCCTAGCGTGGCTTTCAGGTTGATAGAAGTCCAGATTCCGAGGAAATC Variant GeneID:540846|ETV1:NM_001046492:47_cdna 105^301 2 EMBV3_21309 GeneID:540846 4 GENE ETV1 MGC137631 ets variant 1 EMBV3_12277 TGTAGCTTCAGGACTGGTGCCTGTGTCTGTGAGTATCCCCTGTATTCTGTAGGTGCAGGA Gene BVT0102_114418 + 0 NULL GK000010.2:67079189-67155090 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42201 GACAAGAATCCTGGGAGCAGCAATTTACAGAAGATAGCGAAGGAGCCCGTAATTGACTAC Gene GeneID:515680|NFX1:NM_001102029:28_cdna Constitutive 0 NULL GeneID:515680 8 GENE NFX1 MGC152506 nuclear transcription factor, X-box binding 1 EMBV3_01678 GCATCTCAGGTGTGGTCTACCTGCTTGATGGCATTCTTTTGTCCAAGCCTCTGGTGGGAT Gene GeneID:513167|GLT25D1:NM_001098955:65_cdna Constitutive 0 NULL GeneID:513167 7 GENE GLT25D1 MGC157388 glycosyltransferase 25 domain containing 1 EMBV3_13126 TCCCCAAATTAGTTAGGTTTCCTGGGGAGTAGGCCCAGCCCCTTTTCTAACTAACATCAT Gene GeneID:282863|IL17A:NM_001008412:219_cdna Constitutive 0 NULL GeneID:282863 23 GENE IL17A IL-17 IL17 interleukin 17A EMBV3_11386 TCATTGTCTTGGACGGGGGAGGACTGAAAACCCATGTCGTGGAAGATTTGTCATGGTGAC Gene GeneID:507365|NET1:NM_001034296:20_cdna UTR3_Alt 2 NULL GeneID:507365 13 GENE NET1 MGC127767 neuroepithelial cell transforming gene 1 EMBV3_35846 AAACCATCACACCCAGCTTGAGGAGGGGCTGCTTCTGAGGTCGGTTGTTGTCTTTCAATT Gene GeneID:280733|BGN:NM_178318:7_cdna Constitutive 0 NULL GeneID:280733 X GENE BGN NULL biglycan EMBV3_20097 ACATGTGGGAGGACCCTAAAATACACCGAATACGGACTCAGAACCCAGGCAGAGCAAGAT Gene BVV0102_121099 + 0 NULL GK000016.2:3605373-3639695 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32925 TTCCCGGGCACCACATTTCTTCTCACTTCCCCAACCAAACACACTCTATTTACTGCCCCT Gene BVT0102_062571 + 1 EMBV3_13342 GK000011.2:49264016-49282708 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13502 GACCAGCATGGCAGGATTCAAGCGAGGGTAAAAAGTGGCAGTAAAAGTTATTGACAAGAC Variant GeneID:536909|SNRK:XM_002696930:476_cdna 223^318 2 EMBV3_42359 GeneID:536909 22 GENE SNRK NULL SNF related kinase EMBV3_27315 AGCCAAGCTCATCAATGGCGGCATCGCCGGCCTGTTTAAGGAGATGCTGGCGGGCTGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40035 TCTGAGAATGGTGTCAGGGTGCAGATGGACAGTTCCGCAGCAATGGCAGTAGTAGAGAAA Gene BVT0102_252889 + 1 EMBV3_18410 GK000029.2:102742-146960 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193797 TCONS_00047022 TCONS_00193796 2 XLOC_117595 XLOC_027159 NonCoding TCONS_00047022 XLOC_027159 NonCoding NonCoding - 13:11388788-11389433 - TSS34198 645 1 TCONS_00047022_3 108 1 0 0 0 0 0 0 0 0 0 0 9.56862032077527e-06 1.77456400843264e-05 0.000839499246189952 0 0 0 0 2.57399897477362e-05 0 0 0 0 4.02673055875444e-05 0.000106674958482574 0.00172065079037736 0 0 0 0.000236778707636003 0 0 XM_005214286.1 LOC101903895 PREDICTED: Bos taurus ankyrin repeat domain-containing protein 26-like (LOC101903895), transcript variant X1, mRNA. 1e-150 536 84.35 0.761240310077519 XM_005263936.1 ANKRD36 PREDICTED: Homo sapiens ankyrin repeat domain 36 (ANKRD36), 9e-25 118 70.93 0.441860465116279 0 noncoding GCTATGTTAAATATTTTTGTCTTATACATAGCTAATGAGAAATGTGAAAGCATGAGCAGTCATAGTGAAAAATATTCTTCTTCCTCATTTATTCATCATGTTCCATAGTTTAAAAAAAACGTCAAAAGGTCTATGCATTTCTATTTATTTCTGGCTGTATCCTTTCTCTACTACTGCCATCGCTGTGGAACTGTCCATCTGCACCCTGACACCATTTTCAGAAAGCATGGAGTTCATCAGCGTCTCGAGTGTCTGGTAGTGGTCAAGGCTAGAACACCCAGACTCAAGCAGTCATGTTTGCGTAGCTGTCACTTGGTGGGCGACTTAGTAATTTCTGTGTCATTGACTTTGTCACTAGTTTCTCTCTTGCCCTCAGGAAAAGCTCCAAACACCTGCATCAATGTGGGTCCTTCCAAAGTAGTTGGCCTTATCTCTTTACCACCTTACTCTGGCCCTTAGCTGTGCATCTAACCAGCCAGACTGTGTAGGATCCCACAGATTCGTTTCCTCACCTCTGGTCTTTGTATGTGCTTCTCCCCTCTGTCTCTTGTACTTCTTCCTGTCCTTCAGGTAGCTACTTCCATAGCACCTCCACCAAAAAGCTGGCAGCATTGACACAAAGCCGGCTGTCCCTTCTGAATGTTC TCONS_00041954 . 5' 2905 TCONS_00041954 . 5' 2905 EMBV3_12610 GGGAGAGCTGGCCTGAAAATAACTTCATTGCGGAAGAAAGCAGAGAGGGCAAGGGAGAGT Gene BVT0101_060067 + 0 NULL GK000017.2:56961604-57065815 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21494 GTTGATCTGTGTAAAAGCTTTGAAAACCAGAGGCGAAGATCTGCAGAAGATGAGTTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17308 GACTTTTAAATGGCAATATTTCATTTCTTGGCAGTTGTATTTGTACTTTACACAGATCTG Gene GeneID:541218|POLK:NM_001102258:45_cdna Constitutive 2 NULL GeneID:541218 10 GENE POLK MGC152198 polymerase (DNA directed) kappa EMBV3_22899 CAGGACGGGGTGAGTTATTGATCTCTCTCTGCTACCAGTCCACCACAAATACTCTTACTG Gene GeneID:539867|SYT4:NM_001098108:112_cdna UTR3_Alt 2 NULL GeneID:539867 24 GENE SYT4 MGC142968 synaptotagmin IV EMBV3_21643 TGTTGCTCCGACCCGGACCCCAGCACCAAGACTACTCCAGAAACTTGATTTCCCCACTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10880 AAGCTGGCCGTGCTCATCACCAACTCCAACGTTCGCCATTCCCTGGGCTCCAGCGAGTAT Gene GeneID:530855|GALK1:NM_001099381:419_cdna Constitutive 2 NULL GeneID:530855 19 GENE GALK1 NULL galactokinase 1 EMBV3_34397 AAAAACTTGAACAAGAGACGAGAGCGAGAGTCCTGCTGGGTTAACATCGCCACCACAGAC Gene GeneID:100294941|LOC100294941:XM_002688844:168_cdna Constitutive 0 NULL GeneID:100294941 7 GENE LOC100294941 NULL hypothetical protein LOC100294941 EMBV3_05164 TGCTCTCCTTAACGAATCCGAACAACTCCTTGGGAAAAGACCTTGACGCTGCAAAGGATG Gene BVT0102_261381 - 0 NULL GK000003.2:115232305-115834030 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24372 CAACCTGCAGATCTATGCCTCCTATGTGTACCTGTCCATGGCCTTCTACTTCGACAGGGA Gene GeneID:513925|LOC513925:XM_002700195:104_cdna Constitutive 0 NULL GeneID:513925 X GENE LOC513925 NULL similar to ferritin heavy chain EMBV3_05856 TAAGCATACTGTTTCAGTCACATTTACCTTGTTGTAGTGTATGGTTTGTCTCCTGTATCC Gene GeneID:527956|ANKRD50:XM_002694394:26_cdna Constitutive 0 NULL GeneID:527956 17 GENE ANKRD50 NULL ankyrin repeat domain 50 EMBV3_00014 GGAGGACTGTGCCACCATAAGGGACTCCTCAAATCCAAGGCAAAACTGGAATGATGTGCC Gene GeneID:514797|CLEC4E:XM_002687823:128_cdna Constitutive 2 NULL GeneID:514797 5 GENE CLEC4E NULL C-type lectin domain family 4, member E EMBV3_23680 AGTACACGGGCCATAAGAACAAGGAGTATAAGCTGGACTGCTGCCTGAGCGAGCGCGATA Gene GeneID:780845|WDR83:NM_001079650:53_cdna Constitutive 1 NULL GeneID:780845 7 GENE WDR83 MGC140753 MORG1 WD repeat domain 83 EMBV3_24586 GGCTGTGTGTGATGGAAATTCAGGTCAATGTTTGGGACCACCTGACACATTTCCTGCTCC Gene GeneID:514255|SLC20A1:XM_002691345:161_cdna Constitutive 0 NULL GeneID:514255 11 GENE SLC20A1 NULL solute carrier family 20 (phosphate transporter), member 1 EMBV3_37492 TGAGGGCCTTGTACCTGATAGCAACTAATGGAACCCCAGAACTTCAGAATCCAGAGAAGC Gene GeneID:513673|LOC513673:XM_002684821:135_cdna UTR3_Alt 2 NULL GeneID:513673 1 GENE LOC513673 NULL similar to serine/threonine kinase EMBV3_24206 AGCAAAGTCTTCTCTACCTGCTCAGCCCACTTGACTGTGGTGATAATATTCTACGGAACC Gene GeneID:789815|LOC789815:XM_002689877:8_cdna Constitutive 0 NULL GeneID:789815 8 GENE LOC789815 NULL similar to Olfactory receptor 13C2 (Olfactory receptor OR9-12) EMBV3_27021 CTATGAACACCTTCCAAATGAGGTCGCCAGTGCTAAACCCAGTGATGTAGAGCTAGAAGC Gene GeneID:524683|SAMHD1:NM_001075861:1150_cdna Constitutive 1 NULL GeneID:524683 13 GENE SAMHD1 MGC142499 SAM domain and HD domain 1 EMBV3_28590 CCGTGGGAGAGGGACTACCCAACAGCAACCTCAGCAAGAAGCAGAAGAAAACAACCACTA Gene GeneID:541114|RAB39:XM_002692974:37_cdna Constitutive 0 NULL GeneID:541114 15 GENE RAB39 NULL RAB39, member RAS oncogene family EMBV3_27647 AACCTTGCTGGGTTGAGCCAGAGGTCATAAGAGGTGCCAAGTCATGGGTGGCTATGCCAA Gene BVV0102_117354 + 0 NULL GK000010.2:18907743-18928629 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016192 TCONS_00016190 TCONS_00016193 TCONS_00016188 TCONS_00016191 TCONS_00016189 1 XLOC_008660 Coding TCONS_00016192 XLOC_008660 Coding Coding LOC100300494 10:18926409-18964815 j TSS11277 3133 1 TCONS_00016192_1 299 12 0.918734539773467 0.000434786375397512 0.000502355255548676 0.000717475299525007 0.000373782778533568 0.00130912147771439 9.39499001418593e-05 0.000215023350558033 0.000347363580477647 0.000388409967060632 6.43466196250354e-05 2.10082614451692e-06 7.89275630971285e-42 5.82052358327628e-05 0.00014455978593639 0.000213307984829767 0 0 0 0.000353626313074792 0.000948162943947792 0.000151078287921406 0 0 0 0.000356983435826595 0.000227944479044456 5.07386488776603e-05 0 1.54906587609914e-05 4.20491548142298e-05 XM_003586517.2 GRAMD2 PREDICTED: Bos taurus GRAM domain containing 2 (GRAMD2), mRNA. 0.0 5651 100.00 0.999680817108203 NM_001012642.2 GRAMD2 Homo sapiens GRAM domain containing 2 (GRAMD2), mRNA. 0.0 1128 70.58 0.761889562719438 TCONS_00016192_1 sp|Q3V3G7|GRAM2_MOUSE GRAM2_MOUSE GRAM domain-containing protein 2; 4e-161 456 77.23 0.996655518394649 1 coding 1 1 1 1 -0.00831920940672472 0.940068190178332 0.00593548497888653 0.906380607181743 CTTTGAGTCCGGGCGCGGCCGCCGGGGCGAGCAGCAACCAACAGATGCACGGGAAGACGGCTTCTCTGAAGAAGAGCACCGAGAAGCTAGGCGGGGTCCAGAGAGCCCAAGACACCAGCCTGTACTGGCCAGAAGGCTTGAAGGGTGAAGATGTGAAGAAGTGCAGACAAGAAGGGATGCTACTGAGTAAATACAACCAGCAGTACCACAAGCTATTTAAGGACATTCCCTTGGAGGAGGTGGTTCTCAAAGTGTGCTCCTGTGCCCTCCAGAGGGACCTGCTTCTCCAGGGCCGGCTCTACATCTCCTCCAACTGGCTCTGCTTCCATGCCAGCCTCTTTGGCAAGGATATCAAGGTGGTCATTCCCGTCGTGTCTGTGCAGATGATCAAGAAACACAAGATGGCACGGCTCCTTCCCAATGGCCTGGCCATCACCACCAACACCAGCCAGAAGTATGTCTTTGTGTCGCTGCTCTCCCGGGACAGTGTATACGACATGCTGAGAAGGGTCTGCACCCACCTACAGCCTTCAAGCAAGAAGAGTCTGTGTGTAAGAGAATTTCCAGAGGAACCTGAGTGCGAGTCTCTGGAAGCCCTCATCCCCGAGATGAAGTGGAGGAAAGTGTGCCCCGCCTCCAGGTCCGTGTCTCTCCCAGATAGCATCCCTTGTATCTCTCGGGCATCCATGGAATCCACGGACAGCTTCTTCCCCTCCAGGGAGCCTCTGGGGTCTGAGATCTCCGACTGTGAGGAGGAGAAGCTGGAGGAGGGGCCCATGAGCAACCGGGAGCTCAAGCTCTGGGATTACCCGCTCCTGAAGGTCTTCTTTGTGCTGATCTGCTTCTTGGTCATGTCTTCATCCTACCTGGCGTTCCGCATCTCCCAGCTAGAACAGCAGTTATGTTCCCTGAATTGGGGCGGCTCGGTCCCTAGGCACAGGTAACAGCCACTTGGCCTTTGACCCCAATCCTCCAAGAGGAATGCTCTGGGTGCTAAGGTGCCACCATCGAAGCCCTTGGTTTGTGCTGCCGCTGTGTTGAGACCGAGTCAGAAAGAAAATATTGCAGAATCCTTCTCCTCCCCGGAGCTCTTCTCCCTCCTTATTTAAATGAGTGGTCTGAAGTACCTGTTTACAAAACTCCTGCAATTTTGGGACTGAGATGGAAAGCCAAGTTTCTGGAAATAGACAAGGAGTTCTGTACACTAAGCTTTAGCAGCCACTTATGTGAAAAAAAATTTTTTTAACTTGCTCCTTGGAAACAGTTCTGACACACAGGTAGAGCATCTGGGACCACTGCAAGGGACAAAGGCCATGCTTTGATACCAAGCACATGGCCCACGCCAGTGGTGGGACAGCGGCCAGAGCCCAACTTGGCAGTGTGGGCTCCACTCTCTTCCAGCATATTGTGCTTTCACTTGGACCCCCGAGAGTTCCTGTTCTGGGGCCCAAAGCATTTCTCTGCAGGTGGCCAGGGGCCCATGCAGGGCAAACTGGAGGCAGTGAGGTGAGCTCTGAGTGAGGAGAGGAGGTCTGTGGCCAGGATTCTAGCTAGGGGCGTGTTCATGGTCTGTGCAGAGGCTCCGTTCTGGCCCCTCTTGAGGAGGTGGGCTCAATCTGGGACCTCACGACTTGCAGCAGGGGAGAATGGCAGTGGCTGTGCAGAGAACAGAGGGCCAGCCTTCTGTGTCCTCAGTTGCTGTTTCCTGGTGAGACAGGGGGAGCGGAGCTTTTTTGATCACTGTGGTCACAGACCAGGTACTCGATCTTCCCCTGGTGTGCTCAAACATTTCCAAGGTGCCCCATGTGGGAAGTGGGGGATGGGAAGGGTAGTGCTGTGATTGGAGGTCTACCCTTGTACTCCCTGCTTCACTGCCTGGATTTTGGAAGTGGCCAATGGCAGCCTGATGGGCTTGATGGTGTTGGGCCACCACAGGGCAGAGCTCACTATGTCAGCTGCAGGCCATGCAGGAGGGTCCTCCACACCTTGGGCTCTGTTCTCCATGAGTAAAATGGAGGTGTCCAAGCTGGGCCGGTGACTGCAGGGACCAGGCCAGGGGCGTCTGTCTGATATCTTTGGAAGCAAGAGAGGTAGAAGACAGGAAGAAGGGACATGGTGGCTTTGCCTTAGAGACTCCTCCTCCTCTGACAATGTCTCCTCAATGCTACAAAACTTCTGTGCTTTAAAACTCTCCTGGGACTCCGATCTGCCAAGACAGTGTCTTTGGAGGTGCTGGAAAGGCCTTAGTGAGGAGGCCAGACATATCAGGGAAAGTCACTGGTGATGGGTGGGTGGGGTCAGAAATAGCCACTTTTTCCCTCTTCAGACACCTGAGAAGTTAACTGGTGGGGGTGGGGGTGGGGGTGCGGGTATCCTGGTGGAAATTATTTACTGTGGAGTGTGACTGTCCTGTTTATGACAAACCCAGATGAAGTCTGGAGGGACTGACAGGAGGTGATAACTTCCTAAACTCAGGCTGTAGGTCTCTCCATCCCAGGCTCTAGGATTGGGCTCAGAGCCTGGCCTTGAGGGATACTTTCACTCAAGATGTATGTCTCAGGTACAACTCACGGCTCCATTCTCCCTGCAGCACCACGCTGGATGCATGCCTGTCCTATTTTAGGAACCAGATCCTTGTTTTCAGGGAAATAATCCTACTTGCCCCAATGCCTCCCCTCCCTGGTCCTTGCTGAAGGGCAGGGAGAACAGGTCCATTCTCTGAACCTTGCTGGGTTGAGCCAGAGGTCATAAGAGGTGCCAAGTCATGGGTGGCTATGCCAACATGATGGTGAACCTAGCCTCCAGTCTCCATGCCCCGGGCTCAGAGAGGGCAAGAAGCGTGCAGAAGGGTAGGTGGCTGTGGAGGCCCTCTTGGGGCCCAGAGCTTTGAGTGACTGCAGTGTGCCTGTCCCTCTGGAGGGCCCTCTGTTTCTTCCTTCTGTTCCCCAGCCTGTTCCTTTGGCCAGGGTGCCTTCTGTTGTGCTCAGTTATAAACCATGTGTATTTATGCAGACCTGCTTGCATTGGCAGATGCTTCTCTAATTCCTTGAGAATTTGGTTCAATTGTCTTTCAGTTGTTCCACTATGGCATTAAACGTTGAAAATGTTTTAAAATAAAAATCTGATTTTTCTA EMBV3_15227 CATGAGGGGATGGAGACTCAGCTGAAGAAGATTTTGGTTCTTCAAAATTGCTGCCATTGT Variant GeneID:511861|SERINC3:NM_001083412:994_cdna 242^432 1 EMBV3_31974 GeneID:511861 13 GENE SERINC3 MGC139788 serine incorporator 3 EMBV3_02485 GTGACAGATAAATTGCCTTTGTGACAGCTAAGAATGACAACGCGAGCCCAACAGACCAAC Gene GeneID:281008|AQP4:NM_181003:4_cdna UTR3_Alt 3 NULL GeneID:281008 24 GENE AQP4 NULL aquaporin 4 EMBV3_22482 GCACTGTAATGCTTTAACTGTCACTTGCACAAGGTAGCCAAGGACTGATTTTGTTTCTTC Gene BVT0102_046926 - 1 EMBV3_33065 GK000007.2:44175538-44464541 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29824 TCGCTGGGCTTTGGCTCTGGCTTTGGAGGCTACAGATGTGGCTCTGGTTTCGGAAGCTTT Gene GeneID:100337313|LOC100337313:XM_002684592:23_cdna Constitutive 0 NULL GeneID:100337313 1 GENE LOC100337313 NULL hypothetical protein LOC100337313 EMBV3_15433 TGCTTCTGTAGTCACACTCTTGAAAGACAAATAGAAACAGCACCCAGCACAACCCAGATC Gene GeneID:512330|RBM22:NM_001037818:49_cdna UTR3_Alt 2 NULL GeneID:512330 7 GENE RBM22 MGC128706 RNA binding motif protein 22 EMBV3_07773 ATCACCGTCATCGGCCTGACTGTGGCCATGACCACGCTCCCCTCTCAGGGCCCAGTGCAG Variant GeneID:616712|C22H3ORF18:NM_001101260:310_cdna 644^817 1 EMBV3_26356 GeneID:616712 22 GENE C22H3ORF18 NULL chromosome 3 open reading frame 18 ortholog EMBV3_21873 AGGGAAAAAATCCTGCTGAAGAGAGGACAATTGCCACAGAACTCAGTGTACCAAACATGC Gene GeneID:615645|ZNRF2:NM_001105443:31_cdna Constitutive 0 NULL GeneID:615645 4 GENE ZNRF2 MGC159391 zinc and ring finger 2 EMBV3_34755 CTACATCGAGAGGGACAACAGGAAATACTATCTAGACCTGAAGGAAAACCAGCGGGGTCG Gene GeneID:512941|PURG:XM_002698702:40_cdna Constitutive 0 NULL GeneID:512941 27 GENE PURG NULL purine-rich element binding protein G EMBV3_13698 GAAGCAGCTATATGAGTCTTCCTGGTGGGCCTGTTAAGGCATTTGTCAGACTTCTGGCTC Gene BVT0102_172851 + 0 NULL GK000020.2:18654746-19348708 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09285 AGGGACCAGGTTCTCCGGGCGCTGGTGAAGGAAATATTCCTTGATCCAGGATCAAGCTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19115 CTTCTGAGATGAACTGTTTGGAGATTAACCACCTCTCTGATGGGGGACCAACTCTATGGA Gene GeneID:617095|CALM1:XM_002691114:40_cdna UTR3_Alt 2 NULL GeneID:617095 10 GENE CALM1 NULL calmodulin 1 (phosphorylase kinase, delta) EMBV3_35821 CAGTTCCTCAAAGAGATTTCCACTCAGGTCTGTGTTTGGAGGCGGCCCTCGAGCCGAGAT Gene GeneID:281801|GRK5:NM_174331:2_cdna Constitutive 0 NULL GeneID:281801 26 GENE GRK5 GPRK5 G protein-coupled receptor kinase 5 EMBV3_17880 GTGTAACGTTTTGGTTGAGATGTTAAATGGTGGAAGAGTACTGTGGATGTGAATGTGGGG Gene GeneID:789148|LOC789148:XM_002688959:104_cdna UTR3_Alt 1 NULL GeneID:789148 7 GENE LOC789148 NULL similar to Ras-related protein Rap-1b precursor (GTP-binding protein smg p21B) EMBV3_23876 CAGAAAAACTCCAGTGCCTGGGAAGGCCCGCAAAAAGTCGTCATGTCAGCTGCTTTAATA Gene GeneID:327708|RAP1B:NM_175824:16_cdna UTR3_Alt 2 NULL GeneID:327708 5 GENE RAP1B NULL RAP1B, member of RAS oncogene family EMBV3_01767 CTAGGAGCACTAGGTTTATGAGCAATACAGGGATCACTTCTAGGAGGATGGAGGGTGTGG Gene BVT0102_381837 + 0 NULL GK000001.2:64797242-64806557 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27868 TCAGAAGCTGCTAGCCTGCCTTTGAAAACAGAAGAGTTATGGAAAAGTTCAGTTTCTTCA Variant GeneID:100295820|LOC100295820:XM_002689283:104_cdna 136^260 1 EMBV3_11314 GeneID:100295820 7 GENE LOC100295820 NULL similar to esophagus cancer-related gene-2 EMBV3_08580 GCATCTTGCCCCAAAGGCTCAGCTGTTAAGGTATTAGGGATGTCCTTTGCACTGACCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19369 GAGCAGCTGGCGCTCCCGGTCTTGAGGAATGTAACCAAGGAGAACAGAAACCACCTTTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07139 CTTCGAGTCAAGGATGACTTGGGGACTTGGTGGAGAGGGACTGCTGATAAGTCTTGGAAT Gene GeneID:516150|AMAC1L3:NM_001101095:108_cdna Constitutive 0 NULL GeneID:516150 19 GENE AMAC1L3 AMAC1L2 acyl-malonyl condensing enzyme 1-like 3 EMBV3_17990 GAAACTGAATCCACCCAAGGGACAATTTCGAAGAAAGGGGGGATAGGGGTAGATGCCTTG Gene GeneID:617624|SLC44A2:NM_001098139:108_cdna UTR3_Alt 2 NULL GeneID:617624 7 GENE SLC44A2 MGC151768 solute carrier family 44, member 2 EMBV3_09425 TCCCTGCATCCTTGGAGAAGACGCAGCAGTACCACTGTCTCTGCGATGGGGGCGTGGAGT Gene GeneID:506188|MEF2B:NR_027315:27_cdna Constitutive 0 NULL GeneID:506188 7 GENE MEF2B LOC100271850-MEF2B MGC160083 myocyte enhancer factor 2B EMBV3_35375 ATGTGCCAGAAAAAGGCTAAGGAGCACAACGAGCGGGACCGCAGAATCTATGCCAACATG Gene GeneID:535704|FKBP5:XM_002697201:80_cdna UTR3_Alt 2 NULL GeneID:535704 23 GENE FKBP5 NULL FK506 binding protein 5 EMBV3_03810 TTCAGCAACCTTCTCGCTGACCATCCTGTCTGACACGGACAAGGAGAACACCGATGACCA Gene GeneID:516987|DMRTB1:XM_002686384:199_cdna Constitutive 0 NULL GeneID:516987 3 GENE DMRTB1 NULL DMRT-like family B with proline-rich C-terminal, 1 EMBV3_24599 AGAAGGGTGAAACATTCCCCACACCCCAGCTGTTCATTCCACTGTGCCTGGACAAGGGCT Gene BVT0102_285883 + 0 NULL GK000028.2:29930561-29964982 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38379 TCCTTGGTAAATCCTGCAAGCCCATCCCAGCTCTTGTCTCTAACCCTCGATGGACTGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19736 AGAACAACTCCCGTCTTCACCCCTGTTTGCTTTCTAGTGGGAGCTCATCTAGGTTTTCCC Gene BVT0101_039245 + 0 NULL GK000002.2:65141758-65216982 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27944 CAACATCTGGACAGAATTTAGTTTTTGGAAGAAGTTTAATCAAAGGCAGCCATAGGCATG Gene GeneID:537487|IGSF10:XM_002685003:123_cdna Constitutive 2 NULL GeneID:537487 1 GENE IGSF10 NULL immunoglobulin superfamily, member 10 EMBV3_10948 ACTCTCATTACAAACCTGGAGCTTCCTGGCATCGAGATGGGGGGTGATGGAGCACCTAAT Gene BVT0102_239705 + 0 NULL GK000010.2:20354805-20379747 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05656 CATGTTTGTTTTTAGTGTCAAATTTTTAGCTGTATTTGTAGCAATCATCAGGTTTGCTAG Gene GeneID:317725|PTPRZ1:XM_002686908:120_cdna Constitutive 0 NULL GeneID:317725 4 GENE PTPRZ1 MGC179578 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 EMBV3_34008 CAAGGTCAAGATCCGGAAGCAAGAAGAAACTTTTAACATTACCTCATGGTGCTGACGAGG Gene GeneID:539923|ZNF644:NM_001082613:183_cdna UTR3_Alt 2 NULL GeneID:539923 3 GENE ZNF644 MGC152168 zinc finger protein 644 EMBV3_28977 GTTTAAAAAACAAGAGCAGCGCCTCGGTGGTGTTCACGACGTACACGCAGAAGCACCCGT Gene GeneID:618954|C25H7ORF20:NM_001076525:332_cdna Constitutive 0 NULL GeneID:618954 25 GENE C25H7ORF20 MGC139961 chromosome 7 open reading frame 20 ortholog EMBV3_14651 AGTGGGTGCTGCTCTGAGTGGTGACTTGGGAGGCTCTTCAGCGCCATTTTATTTCTTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06452 TGGTGGCATTCGAGCTTGTACTCTCACAGTTTTTCCACCTGAAGAAAATCCTGGGTCACC Gene GeneID:767834|KLHL9:NM_001076956:102_cdna Constitutive 0 NULL GeneID:767834 8 GENE KLHL9 MGC134218 kelch-like 9 (Drosophila) EMBV3_06315 GCCAGCAACTGAAGATGACATCAGGTACCGCTGTCCAGGACTCCACCAAATATGAAGATC Gene GeneID:100302500|HSTN:NM_001163414:2_cdna Constitutive 0 NULL GeneID:100302500 6 GENE HSTN NULL histatherin EMBV3_34104 AATGTCATCTCCGTGGGCTCAGGGCTGCTGGACTGCTGGATCCTTTGGTACCGCTGGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28595 ACCATTGGTAATTATGAGGCAGGACCCGAGCTGAAAGGACTGAGGAGTGCAACTCCTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15724 AGCAGCTCCGCCAGTTTGGACTCAACCCCCTGGATCTTTGAAGCTGTGAGTCTCTAGTCT Gene GeneID:508592|CCDC153:NM_001075365:92_cdna Constitutive 0 NULL GeneID:508592 15 GENE CCDC153 MGC142449 coiled-coil domain containing 153 EMBV3_08513 GAGGCAAATATTTACTGTACACCTGGGACCAACACAACACTGTAAATCAACTATACTCCC Gene BVV0102_193928 + 0 NULL GK000030.2:111325717-111387159 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29413 GTGAGGGTTCCCACAGTTGACTCCTTTGGATCTGCCTTCACCATAAGTGATGACATTCCG Gene BVT0102_165057 + 0 NULL GK000024.2:23626522-23739298 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39560 CCTGGAAGAAGTAGCTGAGAAATTAAAACAGGAGGTTTCTTTGGTACAAGAGCAGTTGGC Gene GeneID:789559|HAUS3:NM_001105471:37_cdna Constitutive 0 NULL GeneID:789559 6 GENE HAUS3 MGC139004 HAUS augmin-like complex, subunit 3 EMBV3_38089 CCATTTGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCAC Gene GeneID:100336429|LOC100336429:XM_002692225:1461_cdna Constitutive 0 NULL GeneID:100336429 13 GENE LOC100336429 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_05630 GATAAATTACCTTCCTGGTGTGTTAGGGAAGGAGACTGACAGCAGAGGGGCCTGGTGAAG Gene GeneID:515499|PCNA:NM_001034494:35_cdna UTR3_Alt 3 NULL GeneID:515499 13 GENE PCNA MGC128125 proliferating cell nuclear antigen EMBV3_13449 GCCACACCTTTGCCCTCTTCACCTGCCTCTGGGCCACCATTTCTGTATTTCTGTCCATTT Gene GeneID:523221|KRT78:NM_001102077:18_cdna Constitutive 0 NULL GeneID:523221 5 GENE KRT78 MGC151711 keratin 78 EMBV3_03035 GGGTGATTGGCAGTGGGAGTGCGCTGTCCAGGAATGAAGTGCTGAAGCAGGAGGTGCAGA Gene GeneID:511999|SHPK:NM_001075548:84_cdna Constitutive 0 NULL GeneID:511999 19 GENE SHPK CARKL sedoheptulokinase EMBV3_37857 ATGAAGGATTTATTCTCAGTGCTGCTTTTGAGCTCCAGGACGACAGGATAGTGGGAACCC Gene BVV0102_119386 + 0 NULL GK000030.2:68491177-68598670 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247207 TCONS_00247198 TCONS_00247199 TCONS_00247202 TCONS_00247201 TCONS_00247208 TCONS_00247205 TCONS_00247200 TCONS_00247206 TCONS_00247204 TCONS_00247197 TCONS_00247203 1 XLOC_151267 Coding TCONS_00247206 XLOC_151267 Coding Coding AMOT X:68594353-68675685 j TSS185193 8334 1 TCONS_00247206_6 1079 0.0112790976721862 15 0.897714278688323 0.000905585969847864 0.00143424712073966 0.00199563646046983 0.000307772027276538 0.000551864490296722 2.11416255979351e-05 0.000652225261691405 9.67231018124958e-07 0.000739230474283843 6.06635348835363e-21 1.88103540597103e-19 0.000121311985413437 4.61262463984542e-37 9.27123236858209e-05 2.89049099804084e-05 0.00225393123301704 0.0026478250297801 0.00385611410601197 0.000348662359311035 0.000299403864383945 0.000652659283015341 2.63619831237809e-05 0.00161342138919037 0.00106156881581357 0.000742891950665696 0.00140962386668558 0.000323194231783005 6.28090644183096e-17 1.73815575645254e-05 1.2651684985308e-18 XM_005227927.1 AMOT PREDICTED: Bos taurus angiomotin (AMOT), transcript variant X2, 0.0 1.389e+04 100.00 0.924286057115431 XM_005262087.1 AMOT PREDICTED: Homo sapiens angiomotin (AMOT), transcript variant X1, 0.0 8996 85.76 0.925965922726182 TCONS_00247206_6 sp|Q4VCS5|AMOT_HUMAN AMOT_HUMAN Angiomotin; 0.0 1645 95.81 0.810936051899907 1 coding 0 0 0 0 -0.637780837001152 0.00709100806782071 -0.00798920677861104 0.885923296713879 CGGCTCCTGGGCGGTCCTAGCCGCTCACCGCAAGAAGAAAAGCCACCCGTTCGTCCCCCTCCCCTAGCTCCCAGCTCCTTTGCCTAGGAGCTGCCTTCATCGCAGTCACGCCCCTTCCTTCCGAGGAGCTTTCTAGCTGCCTAAGCTGGTAGACCCCCTGATTTATTCCTCCATCTCCGCTCCCTTTCGCCTCATCTTCTCTTAGTTTTCAGCGCCCCCTCCACCCCCACCTCCAGTCTGTCTCGCCTCCGACCATCCGCTGCTCCACCCTCCGGCCCGGTATCCTGCCTGTCCACTGCCACCAAGGAGAGACCGGACGGAGCGGTGAGGAGGGGAGCAGCCGGGAGCTGGGGCTTCCCTCCTGCCTACCCCTGGCCTCTGGCCCGGGACCGAAGCCACTTGCGCCAGCAGAGTCGTCACCTTGTCTTCGTTTCCTTCAGGGAGCTGCGGAGAAGGACGAATAAGATAACAGAAGTGAAAGCTTCTGTCTCCTTAGAAGAAAGGCTGAGAAACTTAAGTGGGGACTTCTGACCCTGGAGCAGTGTACTACAAGGTCTCGATTAAAGAGTGACCAGTGGTTGGACTCTTGGCGACGATTACCCTGAACCTGAGTGTTAGGGCAGAGGGAATCTACTGTTGCGGTTTCTGGAGCTGCTCATAAGCAAGAATTCCCTATCCTGAGCAAGGCTTTAAGCCTAAAAGAAAGCAGAAATAGGTCAAGGGCAGCCCAGGTGCCCAATTTCTCTCTCTCTTCACAAGGCACCACCAGCAATAGAGATGAGAAATTCTGATGAACAGCCAAGTGGAGGAACCACGGTGTTGCAGCGTCTGCTACAAGAGCAGCTTCGCTATGGCAATCCCAATGAGAATCGCAACCTGCTTGCCATACACCAGCAAGCCACAGGGAACGGCCCTCCTTTCCCCAGTGGCAGTGGGAACCCAGGCCCTCAGAATGATGTGTTGAGTCCTCAAGACCACCACCAACAGCTTGTGGCTCATGCTGCCCGACAGGAACCTCAGGGGCAGGAAATCCAGTCAGAAAACATCATCATGGAGAAACAGCTGTCTCCTCGGATGCAGAATAATGAAGAACTCCCGACCTATGAGGAAGCCAAGGTCCAGTCCCAGTATTTTCGGGGCCAACAGCATGCCAGTGTCGGAGCTGCCTTCTATGTCACTGGCGTGACCAACCAGAAGATGAGGACTGAGGGACGCCCATCAGTTCAGCGGCTCAATCCTGGAAAGATGCACCAGGATGAAGGACTCAGAGATCTTAAGCAAGGACATGTTCGCTCCCTGAGTGAACGACTCATGCAGATGTCACTGGCTACCAGCGGAGTTAAGGCCCATCCACCTGTTACCAGCGCTCCTCTCTCCCCACCACAACCCAATGACCTGTACAAGAATCCCACAAGTTCCAGTGATTTCTACAAGGCCCAAGGGCCACCTCCCAGCCAGCATAGCCTGAAGGGCATGGAACATCGAGGCCCCCCACCAGAGTATCCCTTCAAGGGCATGCCACCCCAATCCATAGTGTGCAAGCCCCAAGAGCCAGGGCACTACTATAGTGAGCATCGTCTGAACCAGCCAGGGAGAACAGAGGGGCAACTGATGAGGTATCAGCATCCCCCTGAGTATGGAGCAGCCAGGCCAACACAGGACATCTCATTGCCTTTGTCAGCCCGGAACTCTCAGCCTCACAGCCCTACTTCTTCCCTCACATCTGGGGGTTCCTTGCCCTTGCTGCAGTCTCCACCATCTACTAGATTGTCTCCTGCCCAACACCCCTTGGTCCCCAACCAAGGAGACCACTCGGCTCACCTGCCTAGGCCACAGCAGCATTTCCTTCCTAACCAGGCTCACCAGGGGGATCATTACCGTCTCCCCCAGCCTGGCCTGAGTCAACAGCAGCCACAGCAGCCACAGCCACACCATCACCACCATCACCAGCAGCAGCAGCAGCCAGGAGAAGGCTATTCCGCTATGCCACGAGCTCAGCAGTCGTCTGCTTCATATCAGCCAATGCCAGCCGACCCTTTTGCCATTGTTTCCAGAGCCCAGCAGATGGTTGAGATTCTCTCAGATGAGAACCGGAACTTGCGGCAGGAGTTGGAAGGATGCTATGAGAAGGTGGCGAGACTGCAGAAGGTGGAGACAGAAATCCAGCGAGTCTCAGAGGCATATGAGAACCTTGTCAAGTCATCCTCCAAAAGAGAGGCCCTGGAGAAAGCAATGAGAAACAAGCTTGAGGGCGAGATTCGGAGAATGCATGACTTCAACAGGGATCTGAGAGAGCGTCTGGAGACGGCCAACAAGCAGCTTGCAGAGAAGGAATATGAGGGGTCAGAAGATACCAGAAAAACCATCTCTCAGCTCTTTGCAAAAAATAAGGAGAGCCAGCGTGAGAAGGAGAAACTGGAAGCGGAGCTGGCCACTGCCCGTTCTACCAATGAGGACCAAAGGCGACACATCGAAATCCGAGACCAGGCCCTGAGCAACGCCCAAGCCAAGGTGGTAAAGCTGGAAGAAGAGCTAAAGAAGAAGCAAGTGTATGTAGATAAGGTGGAAAAGATGCAGCAGGCTCTTGTACAGCTCCAGGCAGCATGTGAAAAGCGAGAGCAGCTGGAGCACCGTCTCCGGACACGACTGGAAAGAGAACTGGAATCCCTCCGAATCCAGCAGCGCCAGGGCAACTCTCAGCCCACCAACGTTTCAGAATACAATGCCGCTGCACTGATGGAAATCCTTCGTGAGAAGGAAGAAAGGATCCTGGCCCTGGAAGCTGACATGACTAAGTGGGAGCAGAAGTACTTGGAGGAGAATGTGATGAGACATTTTGCTCTGGATGCTGCGGCCACTGTAGCTGCTCAGAGGGACACAACAGTCATCAGTCACTCTCCTAATACCAGCTATGACACGGCTCTAGAAGCTCGCATCCAGAAGGAGGAAGAAGAAATCTTGATGGCTAACAAGCGTTGCCTTGACATGGAGGGCAGGATTAAGACCCTCCATGCCCAGATTATTGAGAAGGATGCCATGATCAAAGTACTCCAGCAGCGTTCCCGGAAGGAGCCGAGTAAGACAGAGCAGCTGTCATCCATGCGGCCAGCAAAGTCGCTGATGTCCATTTCCAATGCTGGATCAGGCTTGCTCTCCCATTCTTCAACCCTGACTGGCACCCCCATCATGGAAGAGAAGCGGGATGACAAGAGCTGGAAGGGGAGCCTAGGTATCCTCCTGGCTGGAGACTACCGTGCTGAGTCAGTTCCTTCCACCCCTTCACCTGTGCCGCCCTCAACTCCCCTGCTGTCAGCTCACTCCAAGACAGGCAGCCGGGACTGCAGCACCCAAACGGAACGGGGAGTAGAATCCAACAAAACCAACGTTGTAGCTCCCATCTCTGTTCCTGCTCCAGTTGCTGCTGCCGCTGCTGCTGCCACCATCACTGCCGCCGCTGCCACCAACACCACCACCATGGTAGCTGCTGCTCCAGTGGCTGTTGCTGCTGCCACTGCTCCGGCCACTGCTGCCGCCACCACCCCGTCTCCAGCAACTGCTGCTGCTACTCTGGCTGCTGCTGTTTCTCCAGCTGCCACCGCAGCTCCAGTTCCAGCTACTGCCTCTGCTGTCACTGCCACTGTTGTTGCTCCTGTTGCTGCCACCGCCATTCAGGTTGCTCCAGCTGTTCCGGCTCCAGTTCCAGCTCCAGCTCCGACTCCAGTTCCAGCTCCAGTAGCGGCTCAGGCTTCTGCTCCGGCTCAGACTCAGGCACCAACTCCAGCTCCGGCTGCGGCTGCTCCTCCAGCTCCAACTCCAGCTCCAGCTTTGGCTCAGTCTGAGGCTCCTGCAAGTCCAGCCACCGGTTCTGGACCACGTCGTTTGTCTACACCAAGCCTGAGCTGCAATCCGGATAAGCCAGATGGCTCTGTTTTCCACTCCAACACTCTGGAAAGAAAAACTCCCATTCAGATCCTGGGACAAGAGCCTGATACAGAGATGGTGGAATATCTCATCTAAACGGTCGAATCAAGAGCTGCAGTGTATCAGCAAGAATGCTTTTAATCATTCTTCCCTTTTGTTTGTTCTTATTTTGAGGGTGAGGACAAGGGTTGGGGGAGGGGATTTTTTTAAAGGAACTTTTTATTGAATCAACATAGTACTTAGGTAATACCATACGAACTCCAGTCTGTTCTGGTACCCTTAGGGAGTACCTCTAAAGCCAGATCCATTTGAATGTGCTCTAAAGTTTATTGTTTGGATTTATACAACTACTAGGACTGTTAATAGCTGGATATACATCAGTGTTCTCAACGTGCTGAAATTTGTTTCGCATTTCCATATTCCAGATCATTCTTTTATAGAAGAGCACAGTATGTTTGGAAGACCGTGTGTAACATGTAGTTCAGAAGTGGGAAGCCAGAGAGGATTGAGGTGTGTGCTGTTTTGTATGGTTACCACCTAGGCAGCATCCAGAGAGACCTCTTGCTTTGGGCTCATGAAAGGGAATAGTTTTAGAAGCTGTGTAAACTGGAGAAAAGGTAGGGAGTATTGGGGTGCGGAAGGGTGCTGGAGTTAATTTCCCCCTCCCAATTTCCCAGCTACCCTGGGCCAGGAGATTGTGTTTATCTTTATTTCAGTGGTGCTTTGGAAGTGGGTTCTTTTGATTCCCCTCGTGGAGGTTCATACATTCATATATATACTCTGGAGTAATTTATGCATTTGGATAATTAATATATTGCTTTCAGATGCTAGGAGAGTAAATTAGCTGAGTGATGCACAACTTCTCTCTTAGGGAGTTAGACCACCTGAGGCCTTGACGGACAGTTGCATGAGGTGCTGTGCACAGACTTGTGTAGTCTGTGTGGAGCCAGGAACACAGCTTGCTTGCCTTTCCTGAGACCAAGCTGCTCAGTGTTTATTTCTTCTCCAGCACAAATTCACTGGCTGTGTCACCAGTCTCAAACTGCTAGTCTCAAACTGCTAATCATTAGCAAAATGACGAAGCATTTTTGTTGACAGGTTGAAGGCTTTGAATTTCTGGTGACTGCGTTGAAATAACTCGTGTTGTTTTCCCAAATTCTTCACATACGTCTTAAAAGACAAGTTTGGCTATCACCTCCGATGGAATAGCATCAGAAGCCCAAAGTACTATGCTGCAGTCGGGGGAGAGGGTGCTGCAGCACTATTCTCAGCTACCTCTTCACACTGCCAGTGACTTCATCTTGGAACACCTTTGGAGAGCAGCAGGAAGCACACGTGTGGGCAGGGACCAATGAGGCCATAGCCCCAAGCTTTGCCTTTGGGCTGCCTCTAGGGACACAGAAGGGCTGTCTGTTGCCACAGGTCTCTGCTCTGTCACCTCTCTGCCCTTCATTAAGGTGACAGATCCACAGACAATGTCATTAAGATCAGTTTTCAGGGGTATCGGGTGGGGGGTGAGGGAAGGAAGGGAGGTGTTAGATAAGGGTGGGGGGCATAGGGGTTTGGGGATGTGTTAGATAGAAACCAGATTAATAGAAGAGTAGGCCTGATATATTACATTGTGAGGCATAGTGGCTGGAAGAACTTTAGCTATATAGCCCTACCCCCTCATTTTAGTAATGAGGAATCTGAGACCTGGAGAGGTTAAGTGACTTTTTCAAGACCACACTACAGCTTTCCACTCTGCCAGTTACCATGCTGATTTTGGGAAACATTTTTTCTATACAAAATGCTCCCGTTTAAGAAGAGACACCAACATAGTCCAGGGCACATGCGTTTTGGACAGTGTCCCTGGTTTGAGTAATTTGTCCAACGTTTTGAATTTCTTGTTTCTCATGCAGTGCCTTTTGCAAGGTTTTTGCTTTCCTGATCCTTATTTCAAAAGAGTCACGTGAAACATCCCCCTAAGAAATCAACCTCACTTCTTCTCTTGCTATGGGTTTGGGTATCAGATCATTTTACAGGATTCCTCTGCTAATGTAGGAATGGCATATTTAACAATATTTTTGTATTGTTCCTGAAAGGAATTGTTTTGTCTGTGGTGAGGGGGAGACAGGAGGGAAGGTGATGTAACTTTTAAGCCAGTCATGACTGAAATTTTCAAAAATGAATGATCATCCTACACAAGTCCTCAGTCATCAACTGAATCCCAAATGGAAATTAAAAGTGCAGTTGTGTTAATACTCACTTATACTACCCTTTAGTCATGGGGGGAAACCCTCACATAATAGAACCAACAAGTAGCAAACCTCAGGACTGCTACTTTCTATTCAGATAAATAGAAAAGAAAAAGAAGAAACCAACATTTCATCTACTCCTTTCATGATTATGACACATTGCCAAGTTTTTGCTAGCTCTGGGAGCCATCCTTTTAATCACATTTTGTAAGGTGACAAATGTCATACATTCCACACTGTGTGGCAGCCATCTCTTTAGACTCCTATTTTTTGAGGAAAAGAAGAAGTTCTTGGCCAACTACTATTTTGAACTTTTCACAACTTCTCTGCCCCCTCACACCAGAGGGAGTCCCTTTTGGCTCAGTTTTTAATCCCAGGTAATTTGCTAAAGTAATACGGAACATCTCAGAGATGGAAGAAGTCCATGTCAGTGTTTTCTGTTTACTGGGAGGATAGATCCAGCCTTTTCAGAAAATCTCAATAGGTGTCATTTTAAAAATTCAGGTTTATGAGAGAAATCTCAAGTTAGCCACCTTTTCATGATTGTGTCGAAGTAATAACATTTTGGGGATTTTTCTGGACTCCCACTTATCTATGCATTTTACTGGCACCTCAGGACAGGAGGGTGACCTTGTTGTCTTAACTTGTACTGCCTGGTGGTCTCTGGGGACCTTCTGAGTCAGTTGTATACCAGTGTCCCATGTACAGAAAAACTTCATTAAAATAAACATTACTTGATATAAAACTCCTATCAACAATTTTTTATTAAATAAAACTAGCTTGAGCTGTATTTTAAGACCATGTATCTGATTATTGTTTTAATGAAGGATTTATTCTCAGTGCTGCTTTTGAGCTTCAGGACGACAGGATAGTGGGAACCTAAAATATCTGATGTCATCTGCCATGGGAAACACACCAAGAGCCCAGTCGTGCATTCTTTTTCTTGTTACAGAGTGGGTGGGGACACCAGTTGAGAAATGAACAAACTGATTGTGCAGACTACTTTTTTATCAAGAGCCTAACCACTCATAATCCGGCAGCTTCAAGTGTATACATATGCACTAACTTTTATAAATGATATTCTCTTGTCTGTTAGCCATGCAATCTCATTATCTCAATTGCTCATTCACATTTGGAATGTGTTACTTAAAATGTGTGCAGTCTTGTTGAACATGTTTTCAAAGGAAGGCATCAGCTATGGGCTAATTGCCACCAATTTCAGCCCGCCATGATCCTTGGAAATATATCTTCCAAGTACCATCCATCATCAGTTAGACAACTGTTGGGAGTTTGTTTATTTTTCTCTGGTAGCAACTATGGGTTACATGGAGCCATCAGAACTCCTTCTGGCCTCCCTTGTGATGGCATGTGTTTGTAGAATGGATAGCTGAGGTTGGCAGATGGCTGGACAGAAATCACCTTTGATTTAAAATGTATGTGGCCCCATAATGATGGAGACCCTGTTCTGTAATCAACTGAGCTAGTTCCAATAAAGTTAAGCAGGTTTGAATCCACTTTGTGCCTATCTTTTCACTGATAATAAAGTTAGCTATTTTAAAATGTAATACTGTGTGGAAAATGCTTTGGTGTTTACCCAGAAGAGGCTTTATTTATGCTGTATCAGTGATTACTTTCAATTCGGTATCCAGTGAAATTGCCTTTGAAGGGCAGCATGTGGCAGACTTTGCATTTGTTTAAAGTATGGAATGTGATTATAAAGTATTAAGACAACATCACCATGGGCCACATGGTCTAACTGGTTCCTTTATATATTCAGGCAGCATATATTAAAAGCTTTGCATCTTTTTATCTCCTGGTTCCAAGGGATAAAGTGATGGCCACCCAAAGCAGAGAATTCATCCTTGGGTTAACATTTTGGAAGGCCCCTTGATGTTCCTTTTGTACCCTTGTTCTTATGCCAATTCATCAGTTTTGGTTGAGGGAGCTTGTTATTAAAAGCAAATCAAACCCACAAACAAGTTGGCTCTTTTCACTGAAGATGTTAAAGCTGCCTTTACACTTCCCTCTCTGTGCCTCCTGTTTACCGTCGAGTCCCAGCCTGACCTGGGAGGATAAGATCCCCACAGGCTTTGAAATGGCAGTTTTCATAGTGACATTGGGCGTCTTGAGTGGTGCAGAATGGATAGGGAGAAGGTATAGAATTAATTCCAATTCT EMBV3_02784 GCTGGGTAGCACCAAACATTTATTATTTAGCTGAAGCAGCCTATGGACATATTCTTATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32807 TTGATGAGAGAAGGAAGAAAGTAAAGCTCGATCGAACGCCTGCGAGAAGAGGGTTCCCGG Variant GeneID:524795|DNAJC17:NM_001046276:166_cdna 308^393 3 EMBV3_27607 GeneID:524795 10 GENE DNAJC17 MGC137242 DnaJ (Hsp40) homolog, subfamily C, member 17 EMBV3_02212 AAGAAATTTTATTCTCGGATTTGAGGGTGATGGGGGTGGGTCAGGAAAGGATGGCGCCAG Gene BVT0102_078693 + 0 NULL GK000006.2:68766470-68813853 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203444 TCONS_00203447 TCONS_00203441 TCONS_00203448 TCONS_00203442 1 XLOC_124178 Coding TCONS_00203448 XLOC_124178 Coding Coding SLAIN2 6:68716800-68769468 j TSS152392 4557 1 TCONS_00203448_3 324 0.0302830809743252 7 0.913608141720622 2.78037757160535e-12 0.00153024056245101 0.000963282521508688 0.000466131304830055 0.00112524747408627 0.000439371288705547 0.00119632256655702 0.00111032280021109 0.00235834148419006 0.000164880222797489 4.13991391798067e-05 0.000231270541288909 9.32310535244765e-05 2.81491459388433e-05 0.000558505895749354 0.000643315277782675 0.000113798976145521 0.000794741419479274 0.00079772330735372 0.00104022027014262 0.000661909781673354 0.000189615412149307 2.99307475844403e-06 0.000320699566717913 0.0017346337650842 0.00098841151200446 0.00145094673740482 2.69112460827044e-05 4.22447883047213e-05 3.03150663693462e-07 NM_001035405.1 SLAIN2 Bos taurus SLAIN motif family, member 2 (SLAIN2), mRNA. 0.0 1759 99.80 0.214834320825104 NM_020846.1 SLAIN2 Homo sapiens SLAIN motif family, member 2 (SLAIN2), mRNA. 0.0 3800 85.83 0.730963353083169 TCONS_00203448_3 sp|Q3MHV6|SLAI2_BOVIN SLAI2_BOVIN SLAIN motif-containing protein 2; 0.0 630 99.68 0.969135802469136 1 coding 0 0 0 0 0.00124502606095928 0.994150856395495 -0.0326930031237724 0.559707599698175 CAGTTTTTTACAGGTCTCTCTTCAACTTATAAATACCAACTCAGAAACTTCAGACAGGACAAAAATGAATAAAGCTATATTCATCACCAAAGAAAAAACTTACACCAATGCAGAAATCGGTTAGTCCTTTAGTTTGGTGCAGGCAAGTTTTGGATTACCCAAGTCCTGATGTTGAATGTGCTAAAAAGTCTCTTATCCACAAACTTGATCAAACTATGTCAGCTCTCAAGAGGCAGAATTTGTATAATAATCCTTTCAACTCCGTCAGTTATACAAGTCCGTACAGTCCAAATGCCAGTAGCCCGTACAGTAGTGGTTTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCTATTGTCAAACAGCTGATACTTCCTGGAAATTCAGGTAATTTGAAAAGTTCATCAGACAGAAATCCTCCACTCAGTCCTCAGTCCTCTATAGACAGTGAATTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAGCTAAATGATGTAACTGATGTGCAAATTCTAGCTCGGATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACAGCGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAATATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCACCATCACCACGCAATTCACCTCGACCATCACCTAAGCAGTCACCCCGAAATTCACCTCGTTCTCGATCTCCTGCTCGGGGAATAGAATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTTTCACTTCAAGGCCATCCAACAGATTTACAGACAACCAATGTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACGCAAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAAATTTTCAAGTGCCAAATGGAGGTATACCTCGCATGCAACCTCAGGCTTCAGCCAATCCTTGCCAGCTCCTAAAACCTATGGCAGCATGAAAGATGACAGTTGGAAAGATGGCTGTTACTGACCAGCAAAGACAAGAATGCAGAGGTCCACAGCTTCATGGATACCCCTTCACCAGGCTAAAAGACAACTTTTATATGCAGACTGTTCAGATAAGACTCTTGGGATTTATAAAATCCCAGCCCTCTCTGTCTTAATTAGCACAAATTGACAGAGATGATCAAACAGCACTTTAATGACATTTAACATCAGATGTGTTTGGTAATCATACAATCACTCTCCATGGAATCACTTTTAGTTTTATTTAATAGCAACTAAATTGATTTTTTAATATTTGACAGAGGCCAATATCTGGGCAAAAAACTAATGGATGCCAAAGAGAAATGCCCATCTGTAAATGAGAGCATACCTTTGTGCACAAGGTGAATTCTAGCTATCCAAAACTTCACATTCAACCTAAGTTACTGTATACATAGTATCAATAAATATTTGTGTTAATGAGAACTAATATTCTGACTAATTATCTACAATGTTTCACTAGTACTCCAGGAAACTAGATTGAGATGGAAGGGGACAGGGTGGGAAGAAACCTGGGCTAGAGATTTAAAACACAGTTCCTAAATTTGGGAGAATCCTATAAATTATTTTCACAGATTCATTAGAAAAATTGTCATTTTGTTTAATCTTAAGTTTTGGATGTAGCTCACATATCACCACCACCAGATAGTGTTACACCGTGCATCCATCATGTTGCATCGACATATCAGACTTTTGTGTGTTTGTTTTGATTGCCAAAAGGGCTTAATATCAGTTGTACAATCTTTCTAAACTTTATAGCTCCTGGCTCAGGAAAGATAGCCTTTGCTATTGAAGCCAACTTCTTCACATGCTGTTATCTGTTACAGGACTAAGAGATCTTGTTTTTATTAGCAGGTTTCCATGATGGGAAAGAGCAAGTAGTATGTGTCTTTATTCTTGATATAAATAACACCACTTCAGTGCTTATAACCTGGAACAAAACCATACAATAAGGGGGAGGGGGTGTAATCTATGCACTTAACGTTCAAAAACTCTGGTAATGACAGTTGTATTGTTACTATTAATTGACCTAGCAGCCTATTATGTGGTGGGAAATTATAGCCTGCTGAATCCTATTTAAGTTTATCTGCTTTAAACTGAGCAACTGTTTCAAAACACCCTTTGAAAATACTGTCCCTTTTAGATTCTGTCTGACGTCAGTTTTGGGATTTGGGGGTACAAATGAAACCTACTACATGTGACTCTAACCTGTTAAACACTTGCTCTGTGATGGCCCTTATATATATCCTAGAAATAACTAATTTGGATTTTATTTGACTATTACTAGACTAAAGCTTCCATCTTCTGCAGACTTCTCATTTTTTTCATGGTGAGGTCTGTTTTAAAATATTTAATTTGTAGAGCTTTAAAATATTGGCAGTCAGATCATTAAAGGATTTTAGATATTTGAACATACGTTCATCTTCTGTTAGTCAAAGACATTCTGTAAGTTGGCAAAAGAAATTGAGAGAGAAATGGGAAGCTTATATTCAGCATAGTACTGAGGTTTATAGGTTGAGAGAAGGATAAAACTTTTAAGATCAAGACCGCTGTTCTGCCATGATGGACATCATGGTAGTCTTTATTAGCTTGACCAGTAAGGAGTCATTCAGTTAGCACAGCTGCTGGAAGTTTAAACTGCCAGTGCTAGTGTATTTTGGTGTATAATGCAAGGAAGAAATTTTATTCTTGGATTTGAGGGTGATGGGGGTGGGTCAGGAAAGGATGGCGCCAGAATTCCACATATAATGATGAACTTAAAAATGTTGCTTTTCAGAGGAAGATAATGCATCTGTTTCGGGTAGAGGGGTATCTCTTATAAAAATCTAAGTAAGTAAAAGAGCTAGCCACTGTCTCTTTTAAACCATGTATACACAAGAGGAAAAATAGGTCTCAGTTTTCAGTGCAACATTGCAAAAAAAAAAAAAAATGCTGCAATCTAATAATTAAAAGGAATTTTAACTCTTACAAAACACCCATTACATTTTTAAGTTAGATTATCAGTTTCAAAAGGAATATTCAGGTTATTTAACTTTTTTTTTAATGGCTGCATCAGAAAAAAAAAATGTCTATTTTTCTTTAATTAAAATTTTCATCACTTGTTAAGAACATGATGGATCTGAGTTAGGTAAAGTATTATTTTACCTGCTGTTATACTACCACAGACTATTGGCTTTTAGTTTCCTAAAGAGAAAAATTGCCTTTTTACTAGAAAGCCTTTGTGTATTGCCAATTTTTCTGTTTGGGAAAAATATAAGGATTCGCTGTGGTTACTCTTACAGATGAAATGTGGATTTGATAAACTAGTGCCTATGATTTTAACTTATGTTTGATATATAGTAGTAAGGGTTTTATGAATGTTGATTATTTTTTTGTGCCAACAGCCCAGAATTGTCACTTATATGTGAGCAGAAGGCTATGAGCTCTGCTTCCAAAGTTATTTAATTTTTCAGTGTTTGAATGTTATTTTTTTGTAAGTGTGTTAATAAAAGTGTAAAGAATTGGAAAAATATAAATATTCTTAACTCAAGCATTTGCTGGATCATTTTTCTACAAAACTTGTTTGTATAATATAAAACACTCTGAAGGGTTGGCTTTTTTTGGTTTTCATACCCTGAAAATCACATTTTGTAATACTGGGGACCATTCATAATTGTCAGATACTTTTTAAAATTATTATCTCAATACATCACTTTTATAAAAACGTTTTTCTGAAGGAAATAAGATCCATATGTGTCCCCAGATGTTTGTATAACTCTAGAATGATCTAGACTATGTATATTTAACTTTTTATTGAATGTACAGGCGTCCATTTTTGACATTACGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTCTATAGCCGAACTTGTATGTGTGGTTGCCTCCTTAATAAACAACCTGACCATAATGTTTATTATTAAATTTATATTTGTTTTTTCAAGTGTTTTATTAATTTCTGGGTACAGTAAGATCTACCCTCCTTTTCGCCAGTTGCTTACAATTGGTAATAATAAATATCTCAGTTGATTTTTTTTTTCTAAACGCAACCCAAGTCACATTGTCCTTTCGGACTTGATCTCTGTGAGGTTGGAATATATCATGCTGTATACTCTCTGTCCTAATTACTTCATATATGGATTTTGAAGGGTGAAATTTGTAGTTTACTCAAAACTGGTACATTCCTATAACTTTTTAACTTGCTGTGAATTGTTATCTAGTTAAAAAAAAGATAGCATACATAAACTAGCAAAAACACCATTATGTAAGAGGCTCCAGGAACTTCCCCTGGTGGTCCGGTGGTTAAGAATTCCCTTTGCAATACAGAGGATAGGGGTTCGATCCCTGGTCGGAGAGCTGAGATCCCATATGCTGTGAAGCCCACGTGCCACAATGGAAGATCCCACGGGCCAGAAC EMBV3_01187 CTGAACATTTTACTATTGTGCAGTATTATGAAGAGCTCAGCAATGAATTTGTGGTTGAGG Gene BVV0102_036029 + 0 NULL GK000011.2:84629577-85205521 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34738 CAAGTTCCTCCGAACGATGGATGTGTTCGACATGGAGCAAGGGGGATGGCTGAAGATGGA Gene GeneID:532283|KLHDC8A:XM_002693864:118_cdna Constitutive 0 NULL GeneID:532283 16 GENE KLHDC8A NULL kelch domain containing 8A EMBV3_14252 GATCGGGAGAACAACCCGCCTGCTTCAGGAGGTGGGAGCCAGTGAAGCTGCCCACCATGA Gene GeneID:514117|LOC514117:XM_002698600:23_cdna Constitutive 0 NULL GeneID:514117 26 GENE LOC514117 NULL similar to Uncharacterized protein C10orf92 EMBV3_35454 TGACATTTATTCCTCAGCTTGGCAGTAGAACACGTCAGCGCTCTTAGACTGCAACCGCGT Gene BVT0102_135320 - 1 EMBV3_06324 GK000022.2:36369903-36737623 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126754 TCONS_00126760 TCONS_00126750 TCONS_00126755 TCONS_00126753 TCONS_00126756 TCONS_00126757 TCONS_00126752 TCONS_00126758 TCONS_00126759 1 XLOC_077488 NonCoding TCONS_00126754 XLOC_077488 NonCoding NonCoding - 22:36566256-36645358 - TSS94972 1497 4 TCONS_00126754_2 49 4 0.981125396644796 7.51173126511714e-20 0.000171383344123019 0.000364413615787597 0.000684286077527589 0.000217959458973698 2.21309281338587e-08 4.18277309591402e-09 9.98023663333998e-05 1.92851478575384e-05 1.18931396521099e-64 4.82165455542936e-15 1.74550732170651e-15 3.51640326998725e-05 3.07477833213034e-32 0.000701610284322503 1.14160039282643e-28 0 7.85543509325145e-15 0.000429383944164738 0.000516338449037813 1.1768170347018e-40 0 1.49222143503934e-19 5.11707926774937e-09 1.95354812661077e-23 4.29535055351004e-27 8.92573439276805e-05 8.23729184797856e-16 7.33115896929293e-18 4.03014971578254e-20 XR_229415.1 LOC101906240 PREDICTED: Bos taurus uncharacterized LOC101906240 (LOC101906240), 1e-15 89.7 100.00 0.032064128256513 0 noncoding GGATTTCCCTTGCTCATTGCTTGTATCTTCAGTTTACAACAAATGTCCTGAAAATGGGACACATATGATATCAAAGCAGATGGAATTGTCATAATCACATCATCATCATCATCATCATCATCATCATCATCATCATCATCATACTGAACATCTACTCTACGCTAAGCACCATGTAAATTGCTTCAAATGTATGCATTCTCTCAGAAGGAAGAGGAAAAGAAAGAAGTTAGGATGGGGTTTGGGGCAGCGAATAGAAGGAGGAAGGGAACACTCTGTTTCTTGCCCACTGATGGCTCCAGTCCAGCTCTCAGATGAGACTGATGACCCCTCTGAGGACTGAGCACGCAGTCCCCGGGCACAGCCGTCAGGAGGGACGTCCACGCGGCTGCAGTCTAAGAGCGCTGACGTGTTCTACTGCCAAGCTGAGGAATAAATGTCACGAGAAAAGCCCTTGAAAATGATTCTCATCCTGCTTTTCCATCACAAACAGCCCAAAACGAACTGTTCTCAAATGTTGAACTGTAATATTAGTCGTGGTTGAGAAAGGCTTCTGGTAAGAGGGTTCTTGGGTAAATAAGTTGCTAGGATCTAATTGATTATCAATGAAATTCCCAGAGCAATCTCTTGTACAGGAAATAGGCTCATGTGACCTTTAAAAAAGAAGTATGCTACTTTATGATAAGGTGATTCAAGAGTGATTTTTTGTTGATTTATTTTGGAAAAGCCATTTATACAATGACTGAGATTAAAAAGAGAGAGAGAAGCCTCTGCTGGTCTCTGGTTTACCTTACTTAGAAGGGGAGAGATAAGGTAATTGTATCTTAGAAAAAAATTAACTGCTGTGTGTTGCTGGCTCTCTCAAGCCATTTTCACTTCTCTTATATTGATAGCTCTCACTGCTAACTCCTAAAGACTTTAACAATCCATAGATGGAGTTAATACCTTCAATGCCCCCTTCATGCATTCTCAGCATCAGGACCTAATAAGTAGTGATGTCTGGGTTGCTCTGTTCTGAAGATTGCCTGCCACTACCTTGGTGCACTGCCCTGGATTTGCAGTAATCTGAGGGGATTCAAGGCACAAAGATTCAGAGATTGGAATCATTTTGCCAGCTCTGGAAACCTCTGTCACTCTAAGTTCTTTAATTTTCCTATATTTTTTATTCCCCCCAATAACTGAAGCCTTTACTGGAAGGTCAAGTAACTTTGCTGTAAATTACTAGAGAATCCAGGAAAAAAAGGTAGGAAGGGAAACCTGATTGCTCTCAAACAGTCTTGAAATTTTACCCTTTTAATTCTGTAGGCCCCTTGAACTTAAAAAGGCATATAGAAACATATATAACTTATGTAAACCAGAATACCCATTGATTTCTTGAGCTAACTGATAGCTAACTAGAAATGGGTTTATTGTCTCACTGCTGTTGTTCAAAAGCTTTCTGAAGAGTATGTTCATTTTCCTGCCTTATTAGTCCCAGTAAACCTAATGGATCATATTGAC TCONS_00126763 TCONS_00126764 s 5' 231546 TCONS_00126763 TCONS_00126764 s 5' 310647 EMBV3_08137 GAAGTTCCCTTTGCAATAAGGTAGACAGATTGGGGGCCGTAGAGATGGCTGACCTATCCC Gene GeneID:788680|FASTKD5:XM_002692388:305_cdna Constitutive 0 NULL GeneID:788680 13 GENE FASTKD5 NULL FAST kinase domains 5 EMBV3_26720 CTGCACCCTGGATGACATCCCCCTCATCAGTGGCCCTGATCTGCCTCCTGCGCTATGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14479 TTCGTCTGACTTGGTCCCAGTCTTGTCACCACCTGTGCAACAGACCTGCAGACCAAGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02274 AAACTCACCTACTCCGAGCTTGTCTCTGTGGCTTAGGCGCAAGCAGTCTGTGTGTGAAGT Gene GeneID:510836|TATDN2:XM_002696881:322_cdna Constitutive 0 NULL GeneID:510836 22 GENE TATDN2 NULL TatD DNase domain containing 2 EMBV3_23295 AGTGGCTATCTGGCCCATTCAAGGGAACAGTGGAGCCTTCCGTGGTGATCAAGACTGTTG Gene GeneID:513493|MYO9B:XM_002688548:170_cdna Constitutive 0 NULL GeneID:513493 7 GENE MYO9B NULL myosin IXB EMBV3_43248 AAACATCAGGAAACCTTCTCACTGCCGAATCTGTGCCGAGCTTTGGAAGCACAGAGGGCA Gene BVV0102_447880 + 0 NULL GK000013.2:73401615-73436660 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086289 TCONS_00218178 TCONS_00165814 TCONS_00115686 TCONS_00252353 TCONS_00020158 TCONS_00224113 TCONS_00197928 TCONS_00231338 TCONS_00229957 TCONS_00250720 TCONS_00116100 TCONS_00169197 TCONS_00071860 TCONS_00079835 TCONS_00220662 TCONS_00038381 TCONS_00222766 TCONS_00129573 TCONS_00207069 TCONS_00252032 TCONS_00209846 TCONS_00012329 TCONS_00124109 TCONS_00230723 TCONS_00065476 TCONS_00116172 TCONS_00177370 TCONS_00221885 TCONS_00252107 TCONS_00169198 TCONS_00008224 TCONS_00056146 TCONS_00249011 TCONS_00176735 TCONS_00054904 TCONS_00031939 TCONS_00107179 TCONS_00089345 TCONS_00039951 TCONS_00189891 TCONS_00169199 TCONS_00189806 TCONS_00155779 TCONS_00038458 TCONS_00039227 TCONS_00210175 TCONS_00063181 TCONS_00185881 TCONS_00018773 TCONS_00234065 TCONS_00009259 TCONS_00111497 TCONS_00031983 TCONS_00048820 TCONS_00209636 TCONS_00032589 TCONS_00155780 TCONS_00019961 TCONS_00245928 TCONS_00222777 TCONS_00124585 TCONS_00251707 TCONS_00037818 TCONS_00130084 TCONS_00064462 TCONS_00178325 TCONS_00233372 TCONS_00161667 TCONS_00012336 TCONS_00063081 TCONS_00010054 TCONS_00153218 TCONS_00010470 TCONS_00041058 TCONS_00240534 TCONS_00123168 TCONS_00065823 TCONS_00209032 TCONS_00040744 TCONS_00012332 TCONS_00110323 TCONS_00085967 TCONS_00039904 TCONS_00109025 TCONS_00199802 TCONS_00109451 TCONS_00209558 TCONS_00178426 TCONS_00020756 TCONS_00238327 TCONS_00040740 TCONS_00179741 TCONS_00177996 TCONS_00088088 TCONS_00157613 TCONS_00021595 TCONS_00233341 TCONS_00040502 TCONS_00127426 TCONS_00177281 TCONS_00170823 TCONS_00223463 TCONS_00116665 TCONS_00072814 TCONS_00142649 TCONS_00249087 TCONS_00122313 TCONS_00020023 TCONS_00223554 TCONS_00011864 TCONS_00251907 TCONS_00107832 TCONS_00253144 TCONS_00110403 TCONS_00115353 TCONS_00218552 TCONS_00122686 TCONS_00156809 TCONS_00022066 TCONS_00152645 116 XLOC_052111 XLOC_131641 XLOC_100654 XLOC_069855 XLOC_155294 XLOC_010836 XLOC_137409 XLOC_119588 XLOC_140827 XLOC_139451 XLOC_153663 XLOC_070269 XLOC_103305 XLOC_043630 XLOC_048719 XLOC_133979 XLOC_022206 XLOC_136073 XLOC_078286 XLOC_125588 XLOC_154973 XLOC_128357 XLOC_007841 XLOC_075661 XLOC_140213 XLOC_040195 XLOC_070341 XLOC_107144 XLOC_135195 XLOC_155048 XLOC_003782 XLOC_033949 XLOC_151954 XLOC_106509 XLOC_032713 XLOC_018184 XLOC_063090 XLOC_054130 XLOC_023768 XLOC_115928 XLOC_115843 XLOC_094822 XLOC_022282 XLOC_023045 XLOC_128685 XLOC_037908 XLOC_111934 XLOC_009455 XLOC_143544 XLOC_004815 XLOC_067397 XLOC_018228 XLOC_028951 XLOC_128147 XLOC_018829 XLOC_010639 XLOC_150855 XLOC_136084 XLOC_076129 XLOC_154648 XLOC_021647 XLOC_078795 XLOC_039186 XLOC_108098 XLOC_142854 XLOC_098554 XLOC_037808 XLOC_005606 XLOC_092983 XLOC_006021 XLOC_024869 XLOC_147198 XLOC_074722 XLOC_040542 XLOC_127543 XLOC_024558 XLOC_066227 XLOC_052005 XLOC_023721 XLOC_064930 XLOC_121454 XLOC_065355 XLOC_128069 XLOC_108199 XLOC_011431 XLOC_144994 XLOC_024554 XLOC_109511 XLOC_107769 XLOC_052875 XLOC_096068 XLOC_012268 XLOC_142823 XLOC_024318 XLOC_077648 XLOC_107055 XLOC_103665 XLOC_136763 XLOC_070831 XLOC_044582 XLOC_087074 XLOC_152030 XLOC_073868 XLOC_010701 XLOC_136854 XLOC_007414 XLOC_154848 XLOC_063742 XLOC_156085 XLOC_066307 XLOC_069523 XLOC_131872 XLOC_074241 XLOC_095269 XLOC_012737 XLOC_092410 Coding TCONS_00218178 XLOC_131641 NonCoding NonCoding - 7:99213677-99241810 - TSS162275 5729 2 TCONS_00218178_2 157 0.905568161982894 3 0.796459547845869 0.000886771403701653 0.00102376193620026 0.000637427881539969 0.00060712227498956 0.000861658363640783 0.000240511398755287 0.0006507876490391 0.000334216051602831 0.000730185142003349 0.000214057065001311 4.3941352307135e-05 8.08315428101829e-05 0.000233250163478171 0.000763452724724909 0.000798732785629046 7.35735537230835e-05 3.13399592248213e-05 3.72164237701071e-05 0.000220143769383598 0.000283865233785678 0.000112882883633591 4.31142807595197e-05 6.58079553498174e-05 3.90706298563263e-05 0.000459456809083102 0.000383679264587045 0.000370165826075435 3.40174828754841e-05 6.31436507816371e-05 7.1976296098839e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 3e-131 475 97.51 0.0488741490661546 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 5e-83 315 68.10 0.168964915342992 0 noncoding 1 1 1 1 -0.071248880428348 0.590731855767268 -0.0148602594801673 0.803029043356466 CTGCTCTAATTTTTAAGATTTCTTTCCTTCTACTAACCCTGGGGTTCTTCATTTCTTCCTTTTCTAGTTGCTTTAGGTATAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTAAGGTATGCCTGTATTGCTATGAACTTTCCCCTTAGGACTGCTTTTACAGTGCCCCACAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCAAATTTTGATTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGCAGCGTGTTGTTCAGCCTCCATATGTTGGAATTTTTAATAGGTTTTTTCCTGTAATTGAGATCTAATCTTACTGCATTGTGGTCAGAAAAGATGCTTGGAATGATTTCTATTTTTTTTTAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGGTTCCATGTGCGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGATGAAATGTCCTATAGATAGCAATTAGGTCTAACTGGTCTATTGTATCGTTTAAAGTTTGTGTTTCCTTGTTAATTTTCTGTTTAATTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATACTGTGGCACTCCCGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGATCATCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCCTGTTTTGAGGTGGGTCTCTTGTAGACAACACATGCAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCGTTGCCATTTACTTTATTGTTTTGGGTTTGAATTTATACACCCTTTTTGTGTTTCCTGTCCAGAGAATATCCTTTAGTATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGAAAAGCTTTTGATTTCTCCTTCATACTTGAATGAGATCCTTGCTGAGTACAATAATCTGGGCTGTAGGTTATTTTCTTTCACCATTTTAAGTATGTCTTGCCATTCCCTCCTGGCTTGAAAGGTTTTTATCGAAAGATCAGCTGTTATCCTTATGCGAATTCCCTTGTGTGTTATTTGTTGTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTTGTGTTTGATCTTTGTTAATTTGATTAATATGTGTCTTGGGGTGTTTCTCCTTGGGTTTATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCAACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACCCCTATGATTCGAATGTTGGAGCATTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTTTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCCTTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTCATTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTGATTTCAAGATTTTGGATCAATTTCACTATCATTATTCAGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGAGCATTTATCCTGTTCCTTTATCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTAAATTTCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTTTGTGGAGTTCTCTTTATTGTGGCGTTTCCTCGCTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGGACGCTTGTGTTGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTAGAGTGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTATGGTTTTGGGGTGACTTTGGGCAGCCTGTATCTTGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTGTGTGGTGCTTGGTTTCAGTGTCGGTATGGAGGCATTTGATGAGCTCCTGTCAATTAATGTTCCTTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGTCTCCTGCTTCCAGTTATTGGTCTTATTTTTACAGTAGTTTCAAAACTTCTCCTTCTATACAGCACCATCGATAAAACATCTACGTTAAAGATGAAAAGTTTCTCTACCGTGAGGGTCACCCAGAGAGGTTCACCGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGATGAGGTGGAATCAATAGTGGAGAGAGTGGGCTAGCCAGTAATCACTTCCTCATGTGCACTCCACAACTGGACCTCTCAGAGATGTTCACGGAGTTATACAGAGAAGAGAAGAAGGAGGAAGGAGACAGAGGTGGCCAGAAGGATAAAAGGGGGGAATGAAAAGGAGGGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAACTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACCTGGTGGAGAAAAAGGAGAGTCCAAAGGGAGAGAGAGCAGTTAAGCCAGTAATCTCATTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACATAAAAGCAAAAATTAAAAATCTAGAGTTTGGAATTTCAAAAATATGATGTTAAAGAAAAGAAGAAGGAAAAGAAAGAGAGAAAAAATGAACAAAAACAAACAAGGTCGCAAAAATTATAAAGAAAATATAGGTACAAAATTGATAACTAATACCAAAAAGCAAAAGTTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGTTAAAAAAAAGAAGATGAAAAAGAAAGAGAGAAAAACAAAAAACAAAACCAATGTCACAAAAATTATAAAGAAAATACAGGTACAAAATTGATATCAAATACCTAAAAGCATAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAGATATACAATGTTATATAAAAGAAGAAGAGAAAGAAACAGAGGGGAAAAAAAGTCACAGAAATTATAAAAAAAAAAACTATAGGTACAAAATTGATAACATATACCAAAAAAAGCGAAAATTAAAAATCTAGAGTAGAGTTTGGAATTTCAAAAATACAATGCTAAAGAAAAGAAAAAAAAAAACAAGGTCAAAAAATTATAAAAATATATATATATATGAAGTTTGCTGAAGAAAAAAAAATAGGGTCTTTTTTTTGTGCAAAGTAATAGGTTATAAAAGTGAAAATTAAAGGAATAATAGAGGACTTAAATTTTTTTTTAATTAAAAAAGAAAGAAAGAAAAAATGATCATAAAAGTAGTAAAAATATATCGAGGACTTTCTCTGGTTTTGTTGTGAGTATTGTGGGTTCAGCTCATTTTTGGCTAATTCCTTGGTCCGATTTATATTTCTCGAGATCTATAGGCCCCTTCCTATGTAGTCGGTAGTAACCACAGGGTTTTAATCTATTGCCTGTAGCTTCCAAGGCAGTTCCCTCTGTTATAGCTTCTTCTGTTTGCTGGTCTCTTCAGTGTCTGGTTTCCACCCTGACACAAAGAGGATGGTGGAGGACACTTTTTTTTTTTTAGGCTCACTTGTTCAGTTGCGCAGTGGGGAGGGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGCGCTCACAGTGCCTCAGCCACACTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTCCCTGCCCACACTGCTCAGGCTCTAGGTTGTTCCGCCGGGAACCATCCATGGCCAGCCCTGGGCTGCCTGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCCCTCGGGTAGTCCTCAGAGGCACAGACTCAGCTGGGCCTGCATTTTGTGCCCTTCCCAGGTCCGAGCAGCTCAGGTGATGAGGTGTTAAGCGAGCACGATTGCTGCGACTTATCACCTCCCCGCCACTTGGTTATCTAGGTGTACAACCGGCGCACCTTCTCAGGCAGATGTTAACCATCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAGTTTTATAGATAATGTCTCTCTGGGGCTGAGATTGCCCCCTTCCAGCTCTGGCTGCGTGTCACCCGAAGGGGAAGGTCTGCAGCCGGCTATCTCTGTTTAGTCCTTTGTTCTGTGCGTGGGCCTGGTGGTGTCTTAGGTTAGGGCTGGCTTTTCGTGTGGTAGATATCCCACAGTCTGGTTTGCTAGCCCAAATTATTTCACTCAGATAGCGCTCAGGGTATTCAGGCCAGGTCCTTACTCTAAGCGATGCAGCCCGCGCCGCGCCTCCCTGCCCAGCCCCCGCTTGCTAACGGCGGATGCAGGCGTCTGTGCTGCTTCTCCGCTGGGGGAGTTACCGTAGGGCTCGCAATCTGCGAGTTTTAATTGTTTATTTATTTTTTCTCCCTGTTATGTTGCCCTCTGTGCTTCCAAAGCTTGGCACAGATTCGGCAGTGAGAAGGTTTCCTGGTGTTTGGAAACTTCTCTCTTTTTAAGACTCCCTTCCCGGGACAGAACTCCATCCCTCCCTCTTTTGTCTCTTATTTTGTCTTTTATATTTTTTTCCTACCTCCTTTCGAAGACTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCTGGCATTCAGAAGTTGTTTTGTGGAATTTACTCAGCATTTAAATGCTTTTTTTGATGAATTTGTGGGGGAGAAAGTGTTCTCCCCATCCTACTCCTCCGCCATCTTGGCTTCTCCCCCTTTAACAGTTTTATTTCAAGCCAACACCTGAGGCAAATATAAGGGATAAGGGATGAGGTCTTAAAAGTTGATCATGTGCTGTAGTAGGTACATATGTTGCCTTCAGCCTACCTCCTTCTTTGGAAACAGCCTCTCCTGACCTTCTTTTTCTACATTATTGTTTCCAGCCTGTCTTCTTTCACAGTACTAATTGGACCAGGTGTGGATCACTGAGCCAAGAAATTCAATCAGTGTTCACCTGGAGAAACAGAACTGAAGGAAGCGGACCTGGACCTGGGGCACAGAGGTGTCAGCATGTTCAAACACAAGCAAGTCAAAGTTACTGTCAATAGGAGAACGATCTAATCTCTGTCCTGCCCATGCACTACCAACAATCCTAAACCTACTATATCTACCAGAACAAAGAGGAATCGGATACCAAGACGGTCTTAACGCTGGATCCACTGCTTTGATTTTAGCAACTTCGGGGAAGAACTTAACCCTGATTCCTCTCTCTAAAGAAAAAGAAAAAAAAGAAAATGAAGAAGAAAATCCTGACTT TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178422 TCONS_00218175 TCONS_00218176 TCONS_00218177 s 5' 178503 EMBV3_32832 CGGTAGCCGCACCATCCTACATGCCTACAGGAACCTGCCAGATGTGTCCGCTAAAGACTT Variant GeneID:614868|KHK:NM_001076351:225_cdna 401^535 2 EMBV3_20319 GeneID:614868 11 GENE KHK MGC151915 ketohexokinase (fructokinase) EMBV3_27075 CATCCTTTCCTGGCCCACATCCGTTCTCCTTGAAGCCTGTACTCAGGTTGCCTTGAATGT Gene GeneID:507860|PI4K2A:NM_001100316:93_cdna Constitutive 0 NULL GeneID:507860 26 GENE PI4K2A NULL phosphatidylinositol 4-kinase type 2 alpha EMBV3_28092 GGCACAAGGGATAAAGAATATTTGGTTCTCTGCTTCCCAGATCCCCAGGTTCCCAAGCTG Gene BVV0102_114577 - 1 EMBV3_08591 GK000017.2:58418689-58438109 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34207 GGGGTTGCTGTAAACTGAATGTTCGTCTTCCTCCCGAATCCATGTGCGGAAACTTCATCC Gene GeneID:615755|RSAD1:NM_001098136:168_cdna Constitutive 1 NULL GeneID:615755 19 GENE RSAD1 NULL radical S-adenosyl methionine domain containing 1 EMBV3_36421 GCCAGGTTGCTTGCCCAGATTCACGATGAGCTGCTGTTTGAAGTGGAGGATTCACAGGTT Gene GeneID:523362|POLN:XM_002688439:75_cdna Constitutive 0 NULL GeneID:523362 6 GENE POLN NULL polymerase (DNA directed) nu EMBV3_32423 AGTGGGAAACCCAGGCATGTCAACGAGAGAGTTGCCCCTGCTTGTCACGACTAGAGAAAA Gene BVV0102_245733 + 0 NULL GK000002.2:120794559-120820357 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111989 1 XLOC_067886 NonCoding TCONS_00111989 XLOC_067886 NonCoding NonCoding - 2:120797869-120799092 - TSS83610 1223 1 TCONS_00111989_1 46 0.789043336058872 1 0 0 0 0 0 0 0 0 0 0 0 5.61535181603801e-06 4.09318363840898e-05 0 0 0 8.63831397169304e-05 1.35750605375987e-05 0 2.34536125538892e-05 0 0 0.000424732536327751 0 0.000164493419366175 0 0 0 1.57075488636468e-05 6.35106269750281e-05 0.000201555595070658 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 7e-42 176 73.03 0.263286999182338 0 noncoding 0 0 0 0 -0.104269669800527 0.369290311021079 -0.00479675701999092 0.923954805639762 TTCTGTTTTTAAAATTTTATTTATTTGGCTGCACCAAGTCTTAGTTGTGGCATGAGGGAAAATCAGTTGAGGCATGCGGGATCTACTTCCCTGACTAGGGATCGAACTCCAGCCCTCTGCATTCAGAGTGTGGCGTGTTAACCACTGGACCACCAGGGAAATCCCTAGGCACTTCTTACTTTCCTTGCTTGACTGCTTCCTCTGTTTCCACATTCCCTCGCCTGTCTAGTTAGTAACTGCTTGAGCCTGTTCTTTGGAACTCAAGGAAGGCCTAGGAGACTTTACTCCTACAAACAAGAAATGGGGGACACAGTGGGGCTTTTGTACCCAGAAAGACTTCACAGGGTCCAGCTCAGTTTCAGTTCCCGTTTCCTTTGATCCTCTGCAATCCTGAGGGGAACGGGGACAGAACGAGAAAAGGAATAAAGGACTCGGGTGGGGAGGTTCGTCATAAACACGGCCGAGGAACTCAGTTTCAGGGGGCCTCGGTTTCTGGAAGCTGCCTGTTCTGACCCCATGTCCAGTCCAGCCACCCTGGCTAATGGTTCCCAGAGTAAACCCAAGCTACTCCCTCTAAGTCCCGCCCAAGTCTCAAGTTTGTGATCGAATTAACTGTTGTTCTTCCTCAAGGCTGTTTTGGTTTGTGACACAACCATCAACCGCAGAATATCAATAAATGTAGTTTCACATTGAAAAATGGGGATTCCCTGGTGGCTTGGTGGTAAAGAGTCAGCCTGCCAATGCAGAAGACGCCAGTTTGATCCCTGGTCCAGAAAGATCCCACAAACCACGGAACAACTAAGTCCGTGCACACGAACCACTGAGCCTGTGCTATAGAGAACGGAAGCCGAAACTGCTGAAGCCCGCTCCCCCTAGAGCCGGTCCTCAACAAGAGAAGCCACTGCAGTGGGAAACCCAGGCATGTCAACGAGAGAGTTGCCCCTGCTTGTCACGACTAGAGAAAAAGCTGGCAACAGCGAAGACCCAGCACAGCCAAGAATAAATAAATAAATTTTTAAATTGAAAAATATATAATTTAGAAACAGTGGTAAATATCAAAACTAAAACCCAACAGAGGGGAAACTGGTTGCCTCGGAGATGGGGAAAGGCAGTGGGGGAGACAGGAACCTGCTGCTTTGCTTTATTGTAACAAACCTTGTGGAGCTTTGTGATATGTCAAACTACATTAATGTATAACTTGGATAAAAATTAAAGCTAAAACT TCONS_00103561 TCONS_00103571 TCONS_00103572 TCONS_00103573 TCONS_00103575 TCONS_00103576 . 3' 3312 TCONS_00103561 TCONS_00103571 TCONS_00103572 TCONS_00103573 TCONS_00103575 TCONS_00103576 . 3' 4534 EMBV3_31517 GAGACTCAGGTACAAACCCGACTTCAGACCTCCCTTGCCAACTTACATCAGAAAAGCAGT Gene GeneID:513829|EIF2AK4:XM_002690785:211_cdna Constitutive 0 NULL GeneID:513829 10 GENE EIF2AK4 NULL eukaryotic translation initiation factor 2 alpha kinase 4 EMBV3_14799 GCTGGAAGCTGGGTTGTTGGGCTGCGGAAGACTGTGGGCTCCTTCAGTGCCATGCATCCT Variant GeneID:514086|CDK5RAP1:NM_001075646:1042_cdna 74^208 1 EMBV3_20283 GeneID:514086 13 GENE CDK5RAP1 MGC142850 CDK5 regulatory subunit associated protein 1 EMBV3_06903 GACTATGCACCACCTCGCTGGGCTCGGCAGGTTTGAACAGGCCATCCAGGCAGCCAGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00596 TTGCTGAACTCAGAGTTAAACCCAGGCCCTGTTGTGATCCAAGCATCTTTGCTTGGGGCA Gene GeneID:768233|ELMOD1:NM_001078108:26_cdna UTR3_Alt 2 NULL GeneID:768233 15 GENE ELMOD1 MGC143134 ELMO/CED-12 domain containing 1 EMBV3_30463 CTGGAGAACATGAGCATTTAGCCCAGGGATCAGAGGAGACAGAGACTCAGGCCTAACTTG Gene GeneID:282709|RHBG:NM_174723:40_cdna Constitutive 1 NULL GeneID:282709 3 GENE RHBG NULL Rh family, B glycoprotein (gene/pseudogene) EMBV3_40583 TCCAGGGACCACGCTCGGAGAATTACTGTACTAGGGCAAGCAGGAAGAGAGAATCCTCCT Gene BVT0102_278014 + 0 NULL GK000016.2:65210676-65330450 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069942 TCONS_00069945 TCONS_00069939 TCONS_00069941 TCONS_00069946 TCONS_00069938 TCONS_00069943 TCONS_00069940 TCONS_00069937 TCONS_00069944 1 XLOC_042098 Coding TCONS_00069945 XLOC_042098 Coding Coding LOC781543 16:65179907-65237309 j TSS52048 5849 2 TCONS_00069945_1 180 0.0627457685074372 9 0.898259612201878 0.000973942623680477 0.000395980764114803 2.39230420061352e-05 1.43256276885817e-09 0.000126774609644556 3.84219472368813e-05 0.000177358805364028 3.39380908560919e-07 0.000204678389264221 9.70808199346673e-08 4.90631865027041e-25 8.12810728677286e-14 5.25909444966452e-07 0.000786163995260916 6.7879022891166e-05 2.73814312050193e-18 0 9.68232706131274e-18 5.43879461889549e-08 0.00144538793778382 7.37593717611885e-08 1.93890452037771e-18 3.03970430614632e-05 8.24328290277265e-10 0.00120087884543559 0.000713746597297228 0.000932497765402119 2.09466298632623e-11 5.59967894153486e-11 1.72864862321401e-22 XM_003583265.2 RGS8 PREDICTED: Bos taurus regulator of G-protein signaling 8 (RGS8), 0.0 1.020e+04 99.98 0.967173875876218 XM_005245555.1 RGS8 PREDICTED: Homo sapiens regulator of G-protein signaling 8 (RGS8), 0.0 2778 78.15 0.580612070439391 TCONS_00069945_1 sp|P57771|RGS8_HUMAN RGS8_HUMAN Regulator of G-protein signaling 8; 9e-132 371 99.44 0.994444444444444 1 coding 0 1 1 1 -0.070500698409095 0.564047931393736 0.00570352378502591 0.932195848898145 ATGTGTCAGCCAATAGGCGGGCAGGACCAGCCTGGCAGCTGAGGGACCCCCTCGCTGGAGCGGAGACTTGGGTGATGCTGACACTGCTGGTCCAGGGACCACGCTCGGAGAATTACTGTACTAGGGCAAGCAGGAAGAGAGAATCCTCCTTGTGGAACTGAACCGGGCAGTGTGAAGATCCATGTGGAGCTCCTTACCCGCAGCCTCTCTGACCATCCCGTTGGCAAAGACGCGCAGGCCATGAGGACTGGTCAAAGACACCTGTGCCTGTGATCCCTGCAAAGGAGCAAACCTGAGTGGTGACAGCGCCTGACGAGCCTCCCTTGGAGTTCTTCCAACCTTCCTCCCGCTCACGCCCTCCCCGGGCTCCGGCACTCCCACCTCCGGGACAGGTCCCCTTGGAGGGAGGTGAGAGGACGTGAAAGGGTAAATCCCTGAGCCCTGCAGTCTTATCTCCCGCCCTGTCGTCCCTGCACATCAGCCAGAGGGTTAACCATAAGTGGGCGCCCGTATGGCCGCTTTACTGATGCCACGCAGGAACAAAGGGATGAGGACTCGACTGGGATGCCTGTCTCACAAGTCTGACTCTTGTAGCGATTTCACAGCCATTCTTCCCGACAAACCCAACCGTGCTCTAAAGAGACTATCCACAGAAGAAGCTACAAGGTGGGCAGATTCCTTTGATGTGCTTCTCTCCCATAAGTATGGAGTGGCTGCCTTCCGCGCCTTCCTGAAGACGGAGTTCAGTGAAGAGAACCTGGAGTTCTGGTTGGCCTGTGAGGAGTTCAAGAAGACCAGGTCAACCGCCAAACTGGTCTCCAAGGCCCATAGAATCTTTGAGGAGTTTGTGGATGTGCAGGCTCCGCGGGAGGTAAACATAGACTTCCAGACCCGAGAAGCCACGAGGAAGAACATGCAAGAGCCATCCCTGACTTGTTTTGACCAAGCCCAGGGCAAAGTACACAGTCTCATGGAGAAAGACTCTTACCCCCGGTTCCTGAGGTCCAAAATGTACTTAGATTTGCTGTCCCAAAGCCAGAGGCGGCTCAGTTAGAACTCAGATGGGGACTCTTGGAGATCACTGGCTTCCCCTTCCCCTTGCTGCCAAGACCATATTCTAATGTGACGTGTCATAGGTGTTCAAAAGCAGTGGCGATTAGGTTGGAAGGCCAGGAGTGAGGAACGGATGAAGAGCCATCCCAAAGTCTGATCAGCCGCCGGAGCTCGGACTCTGTCCTGCCCCCTTTACCCGTGTTTGTGTCTTGGTTAGTGGTAGTACTTTGTCACCCTTCTTTGGGTTGGCAACTTGCTCTTCATAAGGCCTTGGGTCATCTCCACCAAGAAGGGAGATTTGCTGTGCTGGGCTAATCTGTAAATAATGCAAAGGCAATTTCCACCACTTCCACACGCTCCTCATTTAGGATTCCTGACTCTTTGAACTTCTCCTAGACCCCTGTGAAGAAGGGCTGGAAGACTCAGGATCACATTTGTGATTTGCTGTCATAATGTAATGGCCAGTCCTGGGTGCTGAGACCTCAGTGTTATCTGGGGTTTTCCGCACTGTCACTGACAGGTGGCCTCTGAGGAAAGGGACAAACTCCATGAAGTTGGCTATTTCTTCCATTTCCATAGGACCAGTATGAAAGGCCGTGATCACTGCCCATCCCAACCTAGGAAATTCACAAGACTCCTATACACTTGCAAATCCAGGAAGGATCTTGGGAGACGTCCTTCATCACTTCTGATATAGAGCTGCTATTGAGAAATAGACAGCTTGCAAGTCTTCCTCAGTTCTACCAAGAAGTTTTCCAGAAGTTGAATGAGCAGGGAATGTAGCACCAGTAGACTTTTGGGCAGCGGGGCACCATATAACCTCTCTGTTGCTTAATGTACACTCTGTCCTCACCTCCCTGTGGCATCACACATCACTGACCCCGTAGAATGATGGACGGCTTGGTAAAGGGAGGTGAATTCCCCTAGCATGGACAGCTCTCATGTGCCTAATACTTTCCCTGTCTCTCCCTCTTCCCCACTCCATGCAGGTCATGTAATTCTGATGGGGGAGAATGGGAACTTAGGCTGTCACTCTCTTTCCAGCTTGCTTCCTGGGAGTATGCTTTCTTAGAAAGGTCCCTCTCATGAGGGCCATCTTGGCTGATCAGCCGCTTCCTTCTTGATGTTTTGGGATTGAAAATGGAAGCGAAAGTGAAGCTGAGAAGATGACTGTGAACATCTGGTTTATGGAGAACCTTCCTTCAAGGTGACTTCATGGTACCCTGGTGCTGCTCTTGGAAGTACATCAGGAAACTCTTCCTTGGATGGTGAGTGAGATGCAGGAAACCTTTTTCTGGCTGCCCAGGAAGAAGCTGACTTTGGCCCAAGACTGTGGTGCCAGGGAGATGGAGCCTCAGCAGAGAGACCAGAAAGTGGAAGAGGAGCCTGGGAGGTGCTGGTCTCTTGGTAGACTGAATCAGAGAGAACGGGCTGGAGGTCACTCGGGGTGATTGACAGCCGATGGATTTGGATTCAGTGCAGAGTTCCAAAGCTTTCAGCTGGACTAAATGAAGCCACACAGGTGTGGGTTCTGCAGCACAGGTGACTGAGGCCTTGGTGGAAGCTGTCTCGTCCTGGGGGAAGGATGGGCCTCTTTAAATGTGAGGGTATTCCACGTTTGCATTCTCGTCCAGCAGCTTCATGAATCTCTTCCTTCCTCGGCTACAGCTACAACAGGCCAAGAAGGCTCTTGAGTCCCACTGGCTGTTAGGGTCCGCTGCCCTGCTGTGTATCTATGAGCATTTGTGAATGAGAGTTGATGTGTCTGTATAAACCATCAAGGAGAGAGAGAACACAGGACTCCTGAAGAGACCTGTGGAATTTCATGTTCAAGAACTCTGCAGCCTTATGTGGGTGTTCCTAGTTAGATCGGGTAGTATTCCCCCGTCCTCATTGGTGAAAAACCATCCTTAGCTTACGCTGCCAGAATTAATTTAATGATCAAATTCTCAAACAGGGTATTTCCAACGTTGTTTACATACAAAACGTGCATCTGCTGCCAACTCTACTGTCGAACATGAAGGGCATGTAAATTGGAACAGCACTGAGTTACAGAAACATGAAACGTTCTAAGAGGGGCCTTTTTACCACTTCCACTGTCCCCAGGAGAAAAGTCTGAACAAGACTGTTGTACCGGGGAGCCTAGGGTTCTTCCCAAACTACTGGTGGAAGGAAGGCAGCAGATGGTGATGTCATGGAGCCTGGTGACTTCCTCCCACGATGGGGAGGTGTGACGGACCCAGCTTGGGTATCCCGAAATTTGCCACTAAGTGAAGGGTGGGTGGGTTTGTGTTTGTATGTAGAGGAACGTGATAGCTATGTTTATGGTACTCCCATGGAGAGAGAGAGAGTGTGTGTGTGTGAGAGAGAGAGAGAGAGACAATTAAGAGCACTAGACTAGTACACCACAGAGATGATCTTCCCATGGGTGGAGCTTTCCTCACACCCTTTATGTTCTGCTTCCCACAAGTGGCACAGGGCTCTCTGCTCTGATGCTTCTTTCAGGCACTTTGGTCATGCCAACCCAGATTCTGGTCTGTGACGAAACAAAGAGAAATGTTTACAACATCTAGAGCAATATCCGAGCATACCTCATCCTTGACCTTCCCCATCACCCTGTCCCGCCCGCTCCCCTGCCCTCTTCACAAGCCCTCCTCTGCCTCCTTAGGGGGGCATCCCCAGGGGCCACTTCTCCCATTTGCCGTCTTCCTTGGCGCCTTGTGCCGGGCTTGTGCTGTGGCCTGCCTTCCGGGCGCAAGCCGTGCAGTGGGCCGGGCAGAGCTGTGACGTTTAGGGCTGCTCTCCTCCCTGAGTGGCCTTTCAGCCCCACATGAGTCGTAACCGATTTGGGGGCTGGTGTGAGATTTCCTGTCGCCCTCGCTAAACCAAATACAACATCATCAATGACAACCCTTCAGAGCTCTGGGCACCTCTGGGGTGAGGAAGGATCCCCGAGCAGCATCTATTATGAAACCTGAGGATGTGCAGGGGTTACCCAGAAAGCCTGTTACAATTGCTAATTCCCAGCTTCCACACCCAGAGATGCTGATCTGATAGATCTGGGGTGGAACTCAAAAATCTGCATTTTTAATAAGTTCCCAGGTACGTAGTGGCTTGTGAACCATACTTTGAAAAAAGATGGTCTAAGACAGTGGTCTAAGACAGAAGCTCTCCCCCTTGGCTGTTCAGTGGAACCACCCGGAAAGTTGAAAAAACCCAAATGTCCAGATCCCACCCCAGACAGCTTGGGGTTGGAACTCAAACATCAGTAGTTTTTAAAGCTCCAAAGGTGAATTCAATGTGCAGATGAGGTTGGGAAGCTGGACCCGAGGAATGGGGAGGGAGGGGTGGTGGTCTCCAGCTGGTCTCAGAGGGCTAGAGCACACCCAGCCACAAACAAGCACAATAACCAGGAACCTGCCAGCCCTGAATCTGACTCCTAGGGTGGCTGTCTCTGTGCCCTCTCTGACTTGCTCTTTTGAGATAAAAATATTTCTGTCCCAGCTGCATGCATGGGGTATGCCAATGGTGGGGGCTGAAGGGGTCCTTGGGGTTTTCTATGGCTCCCGGCTCTTGTTCACAGGGCTTCCTCCAAGCTTGCCTCGTGGGCTGCTTCTCTGTTTTTTGTTTGTGTTCATGCACTCATGTGCTTGCTCATTTCATGTTAGGCTGTGCCTCTGTGCCCAAGACCATGAAACATGGGAGCTGGTCTTAGGTAGCGGGTGAGGAGTGCATAGCAGTAATAATAGTGGTAGCATGACAGCTTCAGATTTCTCAGTGGAGGGTGTCACACCCTCAGAAGTGCAAGCTCTTTGAGGCTTTCTCTGCCAAGGCCGCCGTGGGGTTTGGGTTGTTGCTCTGCGCCCTCACCATTCCCTTGTTGGTCTCAAGCCGGGTGGGCAGCTGGGAAGCTCCTAGTTGATTTTACTCTCTGGTGCTCTCTGCAGAACTTGCTGCTCTGGATTAACCAAAGCTGTGAATGGCTCTCCGCCCAACCTGCAGGCCCAGCCGCTGGGTGCAGGCCCTGGGCACGTGTCCCCAGCACGGCCGGGTATCCAGGTGTGAGGGCAAGGCGTGAACTCACTGTGGTTGAGCAGCGGGGCTGCGGGTGGGATGAAGACAAGCTGCTCCTGTGGCATCTGCTTCTCCATAAACCGGAAAGGAGAGGTGGTGAGTGGTGAGTTCAGAGGCAGGATGTCTCCCATCATCGAGAGCACCCAGACCTCTCCTGACCCCTGTCTGTGCCCACTTCCCAGCCAGGCAGAGGAATTAGTGATTTTCCATCTGAGGCTCTCTTGCAATCTGCCAAGCATTAGCCCTCTTTAAATCTGCATCCTCCGTTTTGAAAGCAAAAGAGGTGGCGAAGTCACCCCCTGGCACGGGGAGCCTGTGCCACTTGGCATGAGACTGAGAAGGAAGAAGCCAAGCGCGGAGATGTCTTCCTGTCCCTGCGACCTCGCCGAATCATGCGATGCCGTGGTCCAAGTCGGCAGGATGAGGCCACTGGCCGTCCCAGCTGTGGGGGCCGGGTCCTGTCGATACACTGGTCCCCTTCCTGCTTCTTCCTCCCTTCTGCCCCTTGGCTCCCTCCCCTCTTCCAAAGACAGAACCGGTGGCTGGGCTTGTGTGCCCTCCGGGCGAGGCAGCGTTAGCTGCCGAGTCACGGGGCGCAAGCGCATCTGTAGCAGCTCATCCTCATTGAATTGTTTCATTACTGTGCAAAGTGGAATAATGTCATTCACCTCTACTATAAACAAGGCTGTGAGAACATAATAAACCAAACCTGAACACGCTGC EMBV3_00863 ACTAATTAAAACTATAGGCATTGTTGGATCCAGAAACTGAAACTCTGTGAGTAGATCTTC Gene BVT0102_359264 + 0 NULL GK000004.2:74911782-75013860 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182053 TCONS_00182059 TCONS_00182055 TCONS_00182054 TCONS_00182057 TCONS_00182056 TCONS_00182058 1 XLOC_110757 Coding TCONS_00182053 XLOC_110757 Coding Coding LOC100847237 4:74923830-74984269 = TSS136132 3498 1 TCONS_00182053_7 941 23 0.94250306098812 0.00027334355436954 1.96193972267679e-07 2.67493271496503e-05 8.97113078202987e-05 6.35352017202732e-05 7.62324565454465e-10 1.16043322942146e-14 9.45541348019591e-11 0.000101023494171755 3.8739906944742e-06 3.40714197828086e-06 0.000121435363895234 1.29398015332819e-11 0 8.61862719940794e-08 1.99155306535899e-09 2.02151364531548e-24 4.63099987089504e-07 1.98534827353273e-05 0.000317269039154714 1.6371745845803e-80 0 1.69138816176477e-08 3.12506106069432e-07 4.89595767567326e-05 0.000213466612177054 6.89032922056109e-05 1.84492463592563e-23 1.99936725222472e-11 2.36959332689185e-11 XM_003582110.2 C4H7orf63 PREDICTED: Bos taurus chromosome 4 open reading frame, human C7orf63 (C4H7orf63), transcript variant X1, mRNA. 0.0 5579 100.00 0.883933676386507 NM_001039706.2 C7orf63 Homo sapiens chromosome 7 open reading frame 63 (C7orf63), 0.0 4163 86.78 0.990280160091481 TCONS_00182053_7 sp|A5D8W1|CG063_HUMAN CG063_HUMAN Uncharacterized protein C7orf63; 0.0 1661 86.72 0.99893730074389 0 coding 0 0 0 0 CTGAAAGCGGCAAGGTGTGCGGGTGGGTGGCAGGGGCGGGATGCGAGTGGCGTCGCGGCAGCAGAGGCCACGGGCGGACCCCCGGGACCTTTCGCGACTCTAGCCGCTCTTGGGCGGCTTTCACTTTTCGGTAGCGGATCCTTTTTCTGTCTCGCGGCTGCGGGCACAGTGTAGGAAGGAAGGAGACGCACCCATCCCTCGCTCCACAGCCACAGCCATGTCCAGAGCGGAGGCTGCGGAGCCGGCCGAGGCCCCGGAGCCCAGCAGCAGGATCAAGTTCAGCAGCCCTCGCCAAATCCCGATAGTCGGAGTGGTGACGGAGGATGAGGAAGTGCAGGGTGCCTTCAAGTCTATGGACCTAAATCGTGTCATCAAACTCTTCGAAGAGACTGGTAAAGATGATTTGGAAGAAAGACAACTTAAATCTGTCAAGAAATTGGTGCAGTGTTATCAAAATGGATTTCCCTTAAGGGATTTAGCACAGATATTTAAAATTCTGAATTTGTGTGCAGAAAAAATTAAAACACAGCCCCATTTTATAGAACCTGCATATAATATCATAAAATTATGTGGCTTGCCATTTTTGAAAAAGAAAGCATCAGATGAAATAACATATGCTGAAGATACTGCTAATTCAATTGGACTTTTGGGTGACTTAATGAAAATACAAAATTCTGAATTGAGGATTCAAATTTGTAAGTGTATTATTGACTTTTATCATGCAGAACCACCAAAAAAGCATATTACAGGTTACCAGCAGGCTAGTTCCTCATATAAGATTAAAATGGCTGAAGTTGGAGAACTGGCAAAAACAATGATCCAGTCATTGGAGTTGCTTGAAAATCAACTTGTTGAGAAACTTTGGGTACTTAAAGCTCTGCAACATCTCTCAACTTCTGAAGTTAATTGTACTTTAATGGTGAAAGCACAAGCAGCCAGTGGAATCTGTGCTCACCTCAATGACCCAGATCCCTCTGGACAACTTTTATTTCGTTCATCTGAAATACTTTGGAACTTACTGGAAAAATCTTCAAAAGAAGAAATCATACAACAGCTTAGTAACTTGAAATGTTTGCTGGCTTTGAAGGAAGTATTTAAAAATCTGTTTATAAGAGGCGTTAGTCATTATGATCGTCAGCTTAGAAACGACATATTAGTGATCACAACAATTATATCTCAAAATCCTGGGGCACCAATGATTGAATCTGGCTTTACCAGGGATTTGATATTATTTGCGACATTTAATGAAGTTAAAAGTCAAAATCCTTTGGTAAAAGGTCTTAAGCTTTCTAATTCCTATGAAGATTTTGAGTTGAAGAAATTGCTGTTTAATATAATTGTGATCTTATGTAAAGATTTATCTACTATACAGCTATTAATTGATGGCAAAGTTATTTTGGCTTTGTTTACCTATGTTAAAAGGCCTGAGAAACACAAAATACTTGAATGGTCTGCAGCACAGTATGAAGAACTACAGCTGCACGCAATTGCCACTTTGTCATCAGTGGCTCCTTTTTTAATAGACGAGTACTTGTTCTATAAGGGAAATGATCAAGTCCTTGAATTTCTAGCATGGTGTGATAACGAAGATTCCTTCTTTAGTCATGGTAACAGTTTTCATGGTGCAGGTGGCCGTGGCAACAAGTTTGCCCAGATGCGTTACAGTTTAAGACTCTTGAGAGCCATGGTCTACCTTGAGAATGATACTATAAACAAGGATCTGTGTGAAAACGGAGCAATTCAGCAACTAATAGGAATCTTTAAAAATACAATAAGCAAGTATAATGATAAGGAAGAGGCCATTCTTCTGGAAATTCAGTCTGATATTTTACTTATTTTGTCTGGTCTTTGTGAATATCATATTCCTGGGAAGGAAATTTTTGGAACTGAAGGAGTGGATATAATTCTTCATGTAATGAAAACAGACCCCAAGAAGTTACAGAGTGGATTAGGCTATAATGTACTTCTTTATAGTACATTGGACAGCATTTGGTGCTGCATTTTGGGATGTTACCCCTCAGAGGATTACTTTCTTGAAAAAGAAGGCATTTTTCTCCTTTTGGATTTATTAGCATTAAACCAAAAAAAATTCTGCAATCTAATACTTGGAATAATGGTTGAATTCTGTGATAATCCCAAAACTGCGGCTCATGTCAATGCTTGGCGAGGGAAGAAGGACCAGACAGCTGCTAGTCTTTTAATTAAATTGTGGAGAAAGGAAGAAAAAGAACTAGGAGTAAAACGTGATAAATATGGGAAGATTGTTGATACAAAGAAACCTTTATTTACTAGTTTTCAAGAAGAGCAAAAAATCATACCACTGCCTGCTAACTGCCCAACTATTGCAGTTATGGATGTTGCTGAGAATATCAGAGCAAAAATTTATGCTGTGTTGGGCAAACTAGATTTTGAAAATTTACCTGGCTTATCTGCTGAAGATTTTGTCACTCTGTGTATCATACATAGATATCTTGATTTTAAAATTGGAGAAATATGGAATGAAATATATGAAGAAATAAAATTAGAAAAGCTAAGACCAGTCACCACAGACAAAAAAATTTTGGAATCTATTACAGCAGCATCAGAAAATATTGGAAAGATGGTTGTTTCTCTGCAAAGTGAGATGATTGAAAGCCAAGCACGCCAAGATGTGCAAAATGAACAAAAAGTATATACAAAAATACAAGCCACACACAAGCAAAGAGAATTGGCTAATAAATCATGGGAAAATTTCTTGGCCAGAACATCAAATGCTAAAACTTTAAAGAAAGCAAAAAGACTTCAAGAGAAAGCTATAGAATCCTCTAGATATGGTGAAAGACCACCAAATGCGATATTTCACAGAACAGATATTAAAGGCCTTAACGCAACAGTGCCTTCTGGTGGGGTAGTAACAGTGGAAAGCACTCCTGCCCGATTAGTGGGAGGACCTCTGGCTGATACAGATATTGCTCTTAAGAAACTGCCTATTCGAGGAGGAGCCTTACAGAAGGTGAAAGCAGTAAAAACTGTGGATGAGCCAAAGAAGAGTGATCCCGCATAAAATACTCTAAAGGATTTTTGAAATAAATTCCACTGATAATTTTTAGCTAAATATCTTTATATATAAATGTAAAGCAAACATTTTAGAATAAATATTTTAGTAAAATACTATTAAAAATAAAAGAAAGGAAATATAATATATTGTTATTAAAAGTATCAACATATACTGTGAGAAGAGTTATCATCAGTTTCTTTCTAAAGATTACAGTCCTCTTAACTGAAAATTGTAAAACATATTGTATCAGTTAAGACTCTTTCAACTGATGTGAACAGCTCCAACTGATTTGAGCCAAAAAGCAAAACAAAAAAAGAAAAAACACAATAACAAAAGTCAAATATAAAACTAATTAAAACTATAGGCATTGTTGGATCCAGAAACTGAAACTCTGTGAGTAGATCTTCTCTTTTCCTAGAAGCTCCTGAATTATATTCTCCCAGGTTGATATCCAGTAGGAA EMBV3_17907 CCTGTGGCTTCTTGGCAGTACTTTTGCTTTTATTCCGGAGACTTCCATGGTTAAAGGCAG Gene BVT0101_027785 + 0 NULL GK000011.2:26429133-26532662 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00030666 1 XLOC_016919 NonCoding TCONS_00030666 XLOC_016919 NonCoding NonCoding - 11:26436036-26438212 - TSS21665 2176 1 TCONS_00030666_1 91 0.0188419117647059 1 0 1.25052303852681e-05 0.000101592672494447 2.97693769955897e-05 4.19787143677338e-05 6.1261024616159e-05 6.57547058663975e-06 7.50403217000096e-05 5.43632238562905e-05 8.33975821129089e-05 5.6725561007821e-06 5.26009089147279e-06 3.61512370474007e-05 1.31860484216069e-06 2.16176569249657e-06 0 0.000728262860448571 0.000244151135609686 1.15307348876702e-05 0.000161477765782973 4.62684761121193e-05 5.5803817516919e-06 0.000484253541370141 0.000720938352617035 0.00026965175111951 5.73127134604152e-05 1.29512356207103e-05 5.3852504729761e-06 0.000185394344934729 5.80054444032914e-05 0.000138148735409638 0 noncoding CCTGTAATCTTAGAGCCCGTTAATGAAGGCAGAGAACTGTCACTGTAGCTTTCAAAATCATATTTTTCTCTGTCCTTGTGATAAATACCTGTGGCTTCTTGGCAGTACTTTTGCTTTTATTCTGGAGACTTCCATGGTTAAAGGCAGGCTATATTTAATAAATATCATTATTGTTTCCCCTCTCCTAAAAGCACCATTTAAATCAGAAGTTACTGGATTTCTAAATGTTTATGTAAGAGCATCTTGTGACTCTTTTATGATGCCCAGAACTCATTTGACATATGAGGTACAGAGTTAATAGCTAATGCAAAAGAAAGTAGGTTTGTAACTGGCTTGTTCTACATGCATACACATCTTAATAAATCCCTTAAATTAGACGCTTTTTAGCTTAATTTTGGTGACTTCAGAGACTTATGTTTAGGAATATAGAAAGGAGTGAATGTCTTGATCAGACAAGGAATTGGCTCAAGTGCTTTCTCATAGATGCTTTTCCCAGTGGCCCAAAGAGAGCACCTTTGGACAGCAGTACCTCGCCTAGGTAAGCTCCCCTTTGTACCTTCATTACAGTTCCATTTGCTACTTTACTTTTATGTAATCAGAGAGTAGTAAGTGACTGGACAGTAACTGTACATTCCCTTTCCGAGAGATTTTATCTCTGCTCTGAGATTGAAAGGTGCAAAAAAAGTATTACAAGAGTGAAAAGAGCAGGTTTGGTACAATGGTATGCCAAGGTTAATTCTTGCTTTTCCAAGAAAATTCATATAAATATCCTAGGAGGTGATATAGAAAAATTGCTGACAGATGGTAAATAATTTCTTTAGGGAAAATCGTGGAAAAGTTTCCTTTCTCAGTCCCTGATGATTCTAGGATGTAGTTACGTGAAATAGCAAATTTCTTTCATGTAGTACATGCATTTATTCATATTTTGTGTGATCTCTGAGAATGAATGTTGAAATGGACTTCAGGGAATCCTGTGCAGTAGTTATGCCTGGAGGTTTTGTGTAGTGTAGTGTAAAACATACCTTTAATTAATTTTAAGACAAAATTGAACTTGGTTAGTTCGTACCACACATTTCCAAATGGTTTTGAGTAACCTAAATTATACAAATAGATCCATAAGTTAAATAAACCTGAAAGATTGGCTATGTAAAATTATTCTTGACAGCCAATGTTTGTTTATGTAATATTTTTTAAGGCTTTTTCAGGATGGGACACACATGAATCTGGCAGTTAAGAATGTGTAATAGAGTACACACTATTACAGTGTATTAGTGTATATAGTGCACTTGTCAAATGCCTTTCACCGTCAAAAGTTTGCATGTCAATGCTGATTAACAACTTGGGGAAATTTCACATCAGCGAGCAACCCACAAACAGTGTCTGTCAGTTTGAGAGAGAAATACACCCATAAAGCAAACTGAATGATTTGTAATTTCATATCGTCAAACATTTTAACACAGTAGTCCTGAAGACTTGTCATCTGTGTGTTCTTCAAAGAGTAATTTTATAACGGGACAGATCTTTAAATATGTTTTTATGAGGTCTCCAAGTTGATTCCCTATGTACCAGATAGGCCTTTAGAAGCTCTGATTGGGTTCTCCAGGGGCCAGAATCTACTTCCATTTGAGGGCAGCTCTGCCTCTCCTGGTTGGTTCTTCCTGTCATTTGTCTCATGAACCCATTGGGGCCAAACATTTAAGCACAGCTCTTACAGTGACTCGCAGTATCTTTTCTAATTCTGTTAACTTCCCTGATAGATTGTGGCTTCAGTTGTCTCTACCATCCAAACTTCAGTTTTCCAAAGGCTCTAGTTTTCTTTTTTGCTTAAAGTATACAACCCAGAACAGAACCAATATAGGTAGCAGAACATGGTCCTTTGTTCTAGTTACTGCTCTTTTGTTCTTCGACTTAACACTCAATGAACTAGCTTTTCTGACATCCACATGAAAATGAGTCTTTGAGGTTAATTATGTTTACTACTGTTAATAGTCTTTCCCCATCCTGTACTTGTGCAGTTGGTGTTTTGTTCAACCTGCTTTGCAGGACCTTCATTTTTTCTAAGTTTTCTTGTGTTAGATTTATTAACCTTTTGAAATGTTTTGGGAATCATCTAAGATATATATACTATCTTACTCTTTCCCATCACCCCAAAGTTTGAAACTTGAACATTCAATAT TCONS_00024463 TCONS_00024464 TCONS_00024465 . 3' 1271 TCONS_00024463 TCONS_00024464 TCONS_00024465 . 3' 3446 EMBV3_23115 ATCGCTATCCCAGATTCACCAAACAGACACTTACACTGTCACAAATCTCCCTACGCAGAC Gene GeneID:100337384|LOC100337384:XM_002685165:167_cdna Constitutive 0 NULL GeneID:100337384 1 GENE LOC100337384 NULL hypothetical protein LOC100337384 EMBV3_36634 GGGATGCCACAAGATCCTTGAGATTCAACCAAGATGCACAAAGAGAAGATGATCAGCGGC Gene GeneID:538151|LOC538151:XM_002691271:330_cdna Constitutive 0 NULL GeneID:538151 11 GENE LOC538151 NULL similar to KIAA1841 protein EMBV3_13151 CCAAAGAATGGGTGTGTTTGTAGGTGAGGGAGCCAGGAGGTAAGAGCTGACTGATGTCCT Gene GeneID:510878|ESRP2:XM_002694825:709_cdna Constitutive 1 NULL GeneID:510878 18 GENE ESRP2 RBM35B epithelial splicing regulatory protein 2 EMBV3_42581 ACAAGAATTTGATGAACAGTGGGGCTAAGGAAACCCTGGAGCCTCTCATTCAGGCTGCTC Gene GeneID:541234|MYO5A:XM_002690962:336_cdna UTR3_Alt 2 NULL GeneID:541234 10 GENE MYO5A NULL myosin VA (heavy chain 12, myoxin) EMBV3_39179 GCTAGGGCAATCTGGGGTCAGGATGGGAGAGAGAATCAGGGTGAGGTGCTTTGGAATAAA Gene BVV0102_161430 + 0 NULL GK000007.2:64024117-64031683 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00221746 1 XLOC_135058 NonCoding TCONS_00221746 XLOC_135058 NonCoding NonCoding - 7:64028649-64030080 - TSS165744 1431 1 TCONS_00221746_2 88 0.06638714185884 1 0 8.55704087321362e-05 2.80879412770386e-05 9.70021293925305e-05 0 0 0 0 0.000206663870847931 0.000176439472305714 7.76319251470001e-05 7.99854302311927e-06 0.000222387290599498 0 0 1.37140574686785e-05 0.00156882292412886 0 0.000157804269966934 0 0 0 5.7042260019266e-05 0.000102575028390648 0.000644342765720179 0.00034376106508382 0 8.18888279753806e-06 6.71220831991943e-06 0.000359600511574652 0.000499970428026073 XM_005209595.1 SYNPO PREDICTED: Bos taurus synaptopodin (SYNPO), transcript variant X1, 0.0 2578 100.00 0.9979035639413 NM_007286.5 SYNPO Homo sapiens synaptopodin (SYNPO), transcript variant 1, mRNA. 0.0 801 72.70 0.9958071278826 0 noncoding 0 0 0 0 0.181973298552166 0.135955265133868 0.0756183786361124 0.353728134682939 CATGTTTTCCCCGTCCCAGTTCAGACTGCCTGGGACATCTGTAGCCAGAGAAGAGAGTTGTAAAGTGATATTTCCCCCAGGCCCAGAACTTGGGCTTCCAGGAATGCTATAGGTGTCTGCAACTCATCTGTCCCTTCTGGGCCCTTTCATGGCAGACTCTGGGCTCAGAGCTGAGCTAGGGAGAAAACAGTTTGACCTGGAGCTATCTGTTATCCTCTGGCTTTACTTGATAGCCCTGAGTTTGAGGTTGCCCACTTGGAAAGAGGGAGGCAAAGAGTTGTTATGGGCAGTATGCAAGCCATGGCAAGGATGCATAGAAGAGATTCTAGTAGGGAATGATTTGGCTCAGATGACCTCTGAGGGCTCTTCCAGTCCTGAAATGCATTCCATAGTATTAGGAAGGAAGGGAGAGTAAGTAGTAGTGGAGGACTGGCTGGGCAGATGAGTCTGGGTGGGTGAGTGAGGGGTTAGACCAGAGTCTGCCTGTGTTTCTGGTTCCTTAGGAATTACCCCCACTCTTCAGTTTCAGGCTCAGCATCTGTATTGTGCCCAGATGAGTAGGCACTGTTCTGCCTCATCTCCTTCCTGTCACACTCTGGGCTAGCCAGTGTCTGGTGCCCAGTAACACTGGGGAGCCTGGCTGCAGGCCCTAGCCTGCCCCTTAAGCTGTAGTGACTCTGGTTGGGAAGCCTGGAAGGGACACAGGGAGGAATGTGCCTCAGTCCTATAGTTTCCAGAGCTGGCTCGTGGTGCCCTCTAGAGGTTTAAAATATCAGTTTCAGGATCCTAAGTGTGGGGTGGGGGCTGGAATTGGCTGAGGATCAGAGGTATGTATGTAAGTGAAAGGTTACCAGGATGTTGCCAAAGGTGAGGGACAGAGGGTGATTTGGGGGGTTAGGGGTAGACTTACCCCACCCCTCAAGTTGATACTAGACCTGGAACCCCTTAGTGAGGCTAGGGCAATCTGGGGTCAGGATGGGAGAGAGAATCAGGGTGAGGTGCTTTGGAATAAAGGACTGATCCCAGAGGATTCCTCAGGCCTAAAGACTGGGAACATAGGCTCTGGTGGTAGGAAGTTGAGAGGGTGCTCCAGCTTGTCAGTGATGAGTGATCACATTACTGAAGTCCCCTCCTGCTTCAGGGACCCTTGTAGCATGGGAGGCTGGGGCTAAGGGCCCTTTTTAGAGAAAAGACACCATCAGGTTACGGTTAATGCAATGGCACAGAAAAAGCCACTTCTACCTGCATTTCCCACAGAGAGCCAGCAGGAGGCAGCCTTGGGAAGCTGCAGTTCTGTCTGGCTGTTCTCTCCCTGTCACCGCCTTCTCCCCTAGTCCTCTTCTCTAACCCACTAGAAATTGCCTGGTCCTGCCTTTTGCCTCCTGTAGAATTCAGCTCTGGCCCTCAATAAATGCTTCTTGCATTCTTCTG TCONS_00213925 . 5' 1604 TCONS_00213925 . 5' 1604 EMBV3_04921 ACCACCAGGGGAACAGCCACCTAGCCAACGGTATTTGCAAGCGTTTGTCTGGAGTTAGAA Gene GeneID:523756|SLC25A37:NM_001034549:5_cdna Constitutive 0 NULL GeneID:523756 8 GENE SLC25A37 MGC128444 solute carrier family 25, member 37 EMBV3_19873 CATCTCCCGTGACCCTTACATCTCAGACATCCAAGACAGATGACCCCCAACTGAAAAGAG Gene GeneID:506967|ATF1:NM_001075289:44_cdna UTR3_Alt 2 NULL GeneID:506967 5 GENE ATF1 MGC143110 activating transcription factor 1 EMBV3_02450 TTTTTGGTTTGCTGGGTCTTCATTGCTGCTTGCAGGCTTTCTCTACTTGCGGTGAGCAGG Gene BVV0102_246011 + 1 EMBV3_30925 GK000001.2:1310318-1324543 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000030 TCONS_00000029 TCONS_00000028 1 XLOC_000008 Coding TCONS_00000030 XLOC_000008 Coding Coding LOC784171 1:1306593-1312293 j TSS13 4353 1 TCONS_00000030_3 380 0.111647139903515 4 0.236883663800667 0.000288903641047249 0.000342814700096679 1.81951454410831e-11 0.000370016347666466 5.64927291460672e-09 8.46775289208814e-05 1.15917574317712e-08 5.59406544094081e-08 5.49956549484275e-09 1.20715778580423e-07 1.36372175451753e-07 2.91721151689071e-07 4.94249677252014e-05 7.02187976677081e-05 0.00020266602873793 0.00122016702478909 0.000557950322092446 0.000186301093993728 1.84318755695384e-08 0.000188438221545617 4.54577562043085e-08 9.93443289712825e-05 0.000320479459317415 0.000747222563719598 0.000124406643673443 2.64841916952639e-07 0.000206555751073061 8.17953005139035e-07 4.63179542159244e-05 4.9379366563631e-05 XM_002684586.3 DNAJC28 PREDICTED: Bos taurus DnaJ (Hsp40) homolog, subfamily C, member 28 (DNAJC28), transcript variant X1, mRNA. 0.0 4653 100.00 0.592464966689639 NM_017833.4 DNAJC28 Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 28 (DNAJC28), transcript variant 1, mRNA. 0.0 1572 85.95 0.309671490925798 TCONS_00000030_3 sp|Q9NX36|DJC28_HUMAN DJC28_HUMAN DnaJ homolog subfamily C member 28; 0.0 661 82.89 0.997368421052632 2 coding 1 0 1 1 0.0861902326042292 0.640518376387951 -0.0752019746426361 0.49161459286764 ATGTGCTGGTACAATCATTTGCCAGATAAAAACAGAAACGCAAGTAATTTCCTGAGAAATTTCGGAGAGGGTGTCCCCGGCTGCACACCCGAAGAGGCTGTCCAGGTCCTGTTCGGGGAAACGGACTCGTCTCCTCCTTCTCAAAACAATTTTCCGAGGGGCGTCGCCCTCCAAACCACTCGGACTTCAAAGGTCCCCACCTACACCGGCCACAGGCTACGAGAAGCCCCACACATCTACGGAGGCGCCACAGCGTCCTTTTCGCCGCCTCACCTCTCCCCGCCTCCCTCCTCCCGGAAGCAGTCCTGCGCGCGCCGCACTTCCGGGAGAACTACATCTCCCAGAATCCCGCTCAATCGACCCATCTTCCGCTCCAGGTATAATACTGCCCGCCGCACCCCGAGGGTTCCCTCTGTGTAAAACGCAGATGGTCTAGCCCAGCGGCGGAGCTTGCCGCGGGCCTCCAACGGAGACGCCTGTGGAGCGAAGGGCAGATGGCGCACGCACGCGCAGAGGCTCAGCTTGGTAGTGGGAGCCGCTGAGCCGCGTCTGAGATCATTGCTAAGGAAGAACTCTGGGTACCATAAGGAACACAACGTATGTGATGATGGCTCAGATCTTAAGACCTCATCTGAGAAGTGCTTCAGTGATTCCTAATCGAATGAAAATGGGTCCATATCTTGTTGTCATAAGAACTAGAATGATGTCAACTCATAAATCCAAAAGGAATATAAGAGAATATTATGGGCTGCTGAATCTGGATGAAGGCTGTTCTGCAGATGATGTCAGGGAATCTTTTCGTAAGCTTGCCAAGCAATACCATCCAGATGGTGGCTCTAGTACTGCTGATTCTGCAACGTTTATAAGGATTGAAGAAGCTTACAGAAAGGTACTTTCCCACGTGATAGAACAGACAAATGCCAGACAGAGTAAAGTTGAAGACACAGAAGAAGAAGAAGAAAAATTCAAATATAAAACACCCCAACACCGGCATTACTTAAGTTTTGAGGGTATTGGTTTTGGGACTCCGAGTCAACGAGAGAAGCAGTACAGGCAGTTTAGAGCAGACCGTGCAACTGAACAAGTGATGGAATACCAAAAGCAGAAACTGCAAAGCCAGTATTTCACTGACAGTGTCACTGTTAAAGATGTAAGACACAGTAAGGAACGAAAGATAACTCGGGCAATAGAGCGTTTGGTGGAGGATCTCATTCAGGAATCAATGGCAAAAGGAGACTTTGACAATCTCAGTGGGAAAGGAAAACCTCTGAAAAAATTTTCTGGCTGTTCATATATTGATCCTATGACTCACAACCTGAACAGAATATTGATAGATAATGGATACCAACCAGAATGGATCCTAATGCAAAAGGAAATAAAGGATACCATTGATCAACTCAGAGAGGCAATTTTAGCATCAAGGAAAAAACTTGGGAATCCAATGACATCAGCCGAACAGAAACAGTGGAACCAAGTTTGTGAGCAGTTTCAAGAAGACATCAAAAAGCTAAATAAGCGAATTAATGATTTTAATTTAATTGTTCCCCTCCTGACTAGGCAGAAGGTCCATTTTGATGCACAGAAAGAAATTGCCAGAACCCAGGAAATATACACAACCCTTATAAAAATAAAAGAAATCACAAATAAAAACCCAAATAACACTGATCCGGGAGAAGGAGAGAAAACACCTGGAGTTAAGACAGTTTTCTTTAACTGGATGAATGTGTGGAAATTTATTAAAATATGACCATCTCAATGTTCACAGTACTGCCCCAAATAATTTTCAGTAATATTAACACACATAGAGGCTGAGGTTTCTTTCTATAACACAAGAGTCTGAGAACTGTGCACCTCTGTACTTTTCACAAAACGACCCACATCTCCAGTGATGTGTAAGTGAGTGAGAGAACTGTAAGAAACAAACTGAGTCCGAGAAATATTCAACCAGCTTTGTTCTGAAGACATAGCAAGACAAGAGGAAACAATTTAATACTGACACTTGAGTTTATTAAAGCACAAAACTAGTCTAAGACTTTTGGAACATTCTCTATATGGTTGGAAATATTACGACAGGAAATTAGTGTAATGGACTTACAGCACTCTTCTCTTCTTTTTTTTTTATAAAGGCCTTCTCTGTGGGTACTGAATAAAGAAACCACCAAACATCTAGGTTGTACTTCACGCTAACTTCATGAGCCATTGGCAGCAAAGATCCATCAGCCAAGCTAACTGATTTAGCTATTCTAGAAATAGACTCCAATGTCCACTTTAAAGAGTTTATTTTCTGACCTCTCAGAGGTGGGTTCAATGGAAACAAAGTTTCACTTATGGCTTCATTTCTAATCAGAGTCAAAATGTTTTACAGAAGCCTATCTGAAGCCTCTCTTGTATTACACTTCTCAGAGGCTTTTTCAATGAGAGTAATATATCAGTTTACAGTCTTAGGGATCCAATTTCCTGTGTTAGGAACCCTTTAATAAGCAACTACAAGATGTCAGAATTTTGTGCTCACTTGCACCTTTGGCAAATGAGAAGAGATTGACATCCATGAGACTGTGTCCCATCCACTCTCAGACTGATCTGACTTTTTAAGATCTGTGTAATTGCCTTATTCACAGAATTGGGCAACTAGACTTGTCAAAAGAAGCTGGTCTGTTTCCTTATTTAATTCAGAGTGCTGTACTATGGAAGTGTCTCAGAAGCATGTCACTTGCCCCTCTGATTTTGGAAGAACAAGTGATTTTGTAAAGTATGTGATAGATAAGTAAAATTACATCTTCAGAAGGAAATTTCAGACCTTGTGCTTAGATGATGGGGCATTAATGGGTATAATATGTGATTATTTTGTTGAATAAGTTATCACTAGCTTCTGCAATGATCTATTACTCTATATACAATTGTGACCGGTGTGAAATAAGAGCTTTATAATAAATGCTGTTGCTCTAAAACATTTTATAAGGTGATGCTTCTGTGAATCTTGTTAAATATTAGATACATGGCACCTAATTACAATACATGATACCTAATTATGGGGCTTCCCTGATAGCTCAGTTGGTAAAGAATCCGCCTGCAATGCAGGAGACCTTGGTTTGATTCCTGGGTCAGGAAGATCCCCTGGAGAAGGAACAGGCTACCCACTCCAGTATTCTGTATAGACCATAGGGTCACAAAGAGATGGACACAAGTGAGTGACTTTCACTTTCACTTACCTAATCACATTACAAGAACATACATAAAGGAAACCGTTTTTATTTTTGGTTTGCTGGGTCTTCATTGCTGCTTGCAGGCTTTCTCTACTTGCGGTGAGCAGGGGCTATTCACTGTGGGGCTCAGGCTTCTCATCGTGGTGACTTCTCGTTGCAGAGCGCGGGCTCTAGGATGCGTGGACTGCAGTAGTTGTGGTGTGTGGGCTCAGTAGTTGCAGCTCATGGGGTCTAGAGCATATGCTCAGTAGTTGTGGTGCATGGGCTTCGTTGCTCCATGGCATGTGGAATCTTCCTGGACCAGAAATCGAACCTATGTCCCCTGCATTGGCAGGTGGATTCTTACCCACTGAACCACCAGGGAAGTCCAAGGAAATCTTTTTTCATATTAGCTAATGAGAAGGTAAGGTTATCAGAAAACTCTAGTAATTCCTAATTTCAGCACAGCACTTTATGTTTGTAAATGTCTATATTAATAAATTTAATCAGTAAACTTAATGATTATTCAGTGGTGCAGTGTTGTCTAAACAACTAACAGTAATAATAAACATGTTTTTGTCTGACCATCTGGATGTTTTTTTATCTTCTTGCTTGATGATGTCAAAACTGACAGACATGGACTCTTCTTGCTAAGAAAGCAAGTTCACTATGTACAAACAGGGTCACTTACTGAAGTAACTTCCAGGCCAGAAAAAAAATGTGGGCCAGTTCATTGGCATTTGTGGAATCAGAATCTGAACTTAGGCTCTGTTTTGATGGAGCATTGACCTTTTTCTGTTGGTTTTTCATCATGTAACTGTCAGCTTTTCAGATGTAGTAATAATTTATTGAGATCTCTTGACTCATTAATAGGCACATATCTGACTCTTGTCTGATTCCCAGCCTTTTCATGGCTCCTTTCTTCAAACTGTACGACGAAGACCCTGGCCCAGCCCCGCGAGTAGATCACAAGTGCCTTTTGTCTCCATGTCCTTGTTCTGTGTGCCCGAGTTTGGCCTCAGTCAGTAGTCTGGTCCCTCAGGACTATAGTTTTAAGTTCCTTGACAGAATGATTGCATTTTTTTTTTTTTTTTCACTTTGAGTAACTCTGGCCCTTTAATTTGTTAATTTAGTGATAGGCCAGTTACATTTGGTTCTTTGAATAATTGAG EMBV3_31164 GGATACACCAGTTTAAAGAGTCATGAACAAAGATGTGCCTTTTCCTCCTCCACTACCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34983 TCTACCGTGGAAATCCAGAGGCTGTTGAAGGATGTGAAGGAGAACAATCCCAGACTGACC Gene GeneID:100301263|LOC100301263:XM_002695413:45_cdna Constitutive 1 NULL GeneID:100301263 18 GENE LOC100301263 NULL similar to NLR family, pyrin domain containing 2 EMBV3_42388 CCTGTCCTTGGAGGTCTCGGGGTCTGAGATGTACACCGATGTGGATACAAGTGTAAGAGA Gene GeneID:514582|CD22:XM_002695015:257_cdna Constitutive 0 NULL GeneID:514582 18 GENE CD22 NULL CD22 molecule EMBV3_43107 AAGGCATGACTCCAGTGATGAAAATTTTACCCTATAAGTGAAGCAGATGTTTAACTATGG Gene BVT0102_134975 + 0 NULL GK000001.2:22552743-24390483 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34450 AACTGAGCTCTCCTGACCACCGCCAGGGACTTATTTGGATCACTAAGCCTTCTTCTGAAA Gene BVV0102_192659 - 1 EMBV3_27067 GK000007.2:33313091-33463750 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212787 TCONS_00212788 1 XLOC_130254 NonCoding TCONS_00212787 XLOC_130254 NonCoding NonCoding - 7:33395864-33499423 - TSS159563 942 1 TCONS_00212787_2 79 0.466029723991507 5 0.990951930319241 0.000302523121638172 0.00035172715203491 0.000793491451874466 0.000783810464688119 0.000183852242655211 1.00631652349553e-12 3.58167201371295e-08 2.62206892676735e-11 0.000385950940761986 2.89051709832188e-56 1.21444498459196e-18 9.97371518638477e-22 1.60108678604295e-53 5.75707099502913e-46 2.04172559565539e-05 3.12583763859842e-18 7.84444603269058e-19 3.2474824754449e-19 0.000998986948757233 0.00114802427367422 1.59075121876982e-07 1.54501726650003e-18 1.06026265565469e-17 1.07247438710606e-18 0.000706244677951756 0.000217308162343943 6.56877563072717e-09 4.34040198975192e-54 5.25726316955748e-14 2.04363534356126e-18 NM_001040518.2 TM2D3 Bos taurus TM2 domain containing 3 (TM2D3), mRNA. 5e-106 389 92.19 0.278131634819533 0 noncoding 0 0 0 0 -0.0360674412466648 0.791264703426165 -0.00541151954360732 0.930352227223047 GCTTTTCAGAAGAAGGCTTAGTGATCCAAATAAGTCCCTGGCGGTGGTCAGGAGAGCTCAGTTTTAATCTTGTGGTCGAAAAACTAATCTTAGACCAGTCCTCTACCCTTCGTATTGGTATTGCTCACTGTCTGCATTACTATGGAAAATTACGCATTGTTTGTATGGATACTGCAGGAAGAACGAGGGCGCTGCAGCCATAGGCCAGCACTAGGCAACAGCCCTGCAGCCCAGTGAGTCCAGTGAGGGCATGGGGCATGACTGGAGACTGAGGCATCGGAGGAGGAGGAGCAGTGAGCATGGCCTGGGAAGGAGCTGGCAGCAAGCAGTACAGCAATTTGGCTGGACAGCAAGAAAAGCTACTTCTCAAATTCATGCCAAGGCACTCAAAGGATGTGACAGGAAGAAAAGAGAGATAGCCGTTCTGACACCAAATTTGAGTGCCAGTCATTCCATTGTCTGGGGAACAGCCAGCAATAGACAAACGTAATTAACTACTAATGAATGCAACTTTATCTGGTACCTTCGGAAGGTGGCGTCTGTTTTAAGAAAAATCACCCCTGGAGAAATAAGTGTTGACTGACCGCTGTCACAAGGAGAGGGTCATAAATTGTCAGCAGGCCCCCCTGGCCAGAAGATGATGTAACACCCCTAAGACCTCTGTATACATTTGTATGAAGCACCTGACTTTGATAAAAGTTAGGACTGCTGACCCCGCGTGACTTTTGTATAACATCTCAGTGTATAAAAACAGACTCTGGAAAATAAAGAATTGGGATCAGTTCCTCGAAATACTGGTCTCCCCATGTCGTTCTCTCTCTCTCAAACTCTGGCTGAGTCTCCATCTGGAGCGCGGAGCCCGCCGTGCTTACTAATTATGCCTGGGCTTCTAAGATCCGACCGGGGAGGCCTCAGTGTCTCCTCTCCTTTGGGAGAACGGAA TCONS_00216389 r 5' 82775 TCONS_00216389 r 5' 82775 EMBV3_14527 CTGCCGGTTCCTTCCAAAGTTTTAGAGTTTCTCTCCTACCGTGTTTAGAGGACGCTGCCT Gene GeneID:100295764|LOC100295764:XM_002695637:60_cdna Constitutive 0 NULL GeneID:100295764 19 GENE LOC100295764 NULL similar to WD repeat and SOCS box-containing 1 EMBV3_15215 AAGGGGTCCCGCTCTTGAGTGAACGGGCTCCAGCTATCTGATTTGTCAAGGGGCAATTTT Gene GeneID:504449|NECAP1:NM_001034211:25_cdna Constitutive 1 NULL GeneID:504449 5 GENE NECAP1 MGC127577 NECAP endocytosis associated 1 EMBV3_43486 ATGGCAGAATCAGTCGCCTTTGCCAGGAGTGTCCCTCAGATGAATGTGGTGCTGGAGTTT Gene GeneID:100138124|RPS27A:XM_002689952:5_cdna Constitutive 0 NULL GeneID:100138124 8 GENE RPS27A NULL ribosomal protein S27a EMBV3_35587 GTCCATGGCCAGAGGCATGTGCAAGAAGCAACCTATGAGCTTCAGGAGATCTGTAACACC Gene GeneID:527180|GABRQ:XM_002699649:146_cdna Constitutive 0 NULL GeneID:527180 X GENE GABRQ NULL gamma-aminobutyric acid (GABA) receptor, theta EMBV3_32850 GCTGGCATTATGCAATAGCCATTATCATCACTGGAGCAATTTATGCCTTTGTCACCCGGT Gene GeneID:529036|LOC529036:NM_001105624:78_cdna Constitutive 0 NULL GeneID:529036 1 GENE LOC529036 MGC151832 hypothetical LOC529036 EMBV3_16208 ACTGCTGTTTTATTTGATTCCTTTTCCATTTAGTAGAAGGACAGTGCTAACTGGAATTTT Gene GeneID:541186|GOPC:XM_002690092:70_cdna Constitutive 2 NULL GeneID:541186 9 GENE GOPC NULL golgi associated PDZ and coiled-coil motif containing EMBV3_19421 GAGTATGCAGGGGTCGGGGAGAGATAGAAGAATATGCATCTTACAGGGAAAGTTGTGAGC Gene GeneID:513775|ZBTB2:XM_002690337:11_cdna Constitutive 1 NULL GeneID:513775 9 GENE ZBTB2 NULL zinc finger and BTB domain containing 2 EMBV3_40857 ACTGGGGTGAAGAGATGGAGCTGAATTCTCCCCGGACCGCCCACCCGGCAGATGCTGTCT Gene GeneID:617257|CCDC9:NM_001098138:406_cdna Constitutive 0 NULL GeneID:617257 18 GENE CCDC9 NULL coiled-coil domain containing 9 EMBV3_05353 AAAGTAGTCTACAAGTTTTCCAAAAGATTCCAGGCCAATTATGATCCTTAAGCAATAACC Gene GeneID:785165|MGC157332:NM_001102336:19_cdna Constitutive 2 NULL GeneID:785165 29 GENE MGC157332 NULL hypothetical protein LOC785165 EMBV3_36722 ACTCAAGGCGTTGTCTGGAAGCGGCCCATGTTCTGGCAGTATGGAGAGTGGGTGGAGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14315 AGCCGGCCTCTATGCTGCACGCATCCCTGAGCGCTTCTTCCCTGGAAAATTCGACATATG Gene GeneID:407235|ADIPOR1:NM_001034055:37_cdna UTR3_Alt 3 NULL GeneID:407235 16 GENE ADIPOR1 MGC127115 adiponectin receptor 1 EMBV3_07324 TCATGAAGTACAACCAGCATATGCTACAAGGTGAAAAAGGTGTGAGGGTTGAACTCAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08695 TACTTTAACTGCTGTAAACCTTCAAAAGTTAATAGAAATGAGATATACTGGTTTGTTTCT Gene GeneID:541077|ETF1:NM_001076254:25_cdna Constitutive 1 NULL GeneID:541077 7 GENE ETF1 RRF1 eukaryotic translation termination factor 1 EMBV3_17064 TGAATCCACTGTGGTTCAAACAGCACTGTGCCATACACACTGCTGCTATGGATATGCTGG Variant GeneID:404131|HSDL2:NM_001104963:8_cdna 526^624 1 EMBV3_00475 GeneID:404131 8 GENE HSDL2 HDLP MGC139898 MGC159702 hydroxysteroid dehydrogenase like 2 EMBV3_01418 AAGATGAAGCTCTGGAGAAAGACTTGAATGTGAGAGAGCAGCAGTAGATGCGTCTTATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16820 TGGTTTCTGTGATTGCCTCTGAAGCCTATTTAGGCCATGGAGGCTCTACAAATTCTGAGG Gene GeneID:613811|CXCL12:NM_001113174:41_cdna Constitutive 0 NULL GeneID:613811 28 GENE CXCL12 MGC139895 SDF1 chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) EMBV3_14293 TCACTATAACATGTACCCACAGAACCCTGACCCGGTGCTCGACCAGGATGGAGAATTCGA Gene GeneID:282375|STAT5A:NM_001012673:36_cdna Constitutive 0 NULL GeneID:282375 19 GENE STAT5A STAT5A/MGF STATA5 signal transducer and activator of transcription 5A EMBV3_14538 GTAGCCGCAGTGAAGCCAGCCGAATTCTGGACATGCTGGTGTCTACACGGCAGAAGAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37261 AGACACGATAATGAGAGAACATATATTTGTGCCGAGTGTGGCAAAGGCTTCTTTCAGGCC Gene GeneID:100141128|ZSCAN4:XM_002695494:258_cdna Constitutive 0 NULL GeneID:100141128 18 GENE ZSCAN4 NULL zinc finger and SCAN domain containing 4 EMBV3_10719 TGTACCAAGTTGTGCAGTTTACAGGCATCCTCCTCTTCCCCACAGCCATCGAGAACATAG Gene GeneID:100336978|LOC100336978:XM_002691927:4_cdna Constitutive 0 NULL GeneID:100336978 12 GENE LOC100336978 NULL rCG36889-like EMBV3_20936 GACGAAGTATTCAGACAGCTTGGCTATGGCAAGGAAGAGGAAGAGGATGACTTCAAAGTG Gene GeneID:100139661|LOC100139661:XM_002684765:264_cdna Constitutive 0 NULL GeneID:100139661 1 GENE LOC100139661 NULL similar to chromosome 3 open reading frame 30 EMBV3_21732 CCAATTGCTTTGGGTTCTGTGCAGGCTGCACACCTGGGCCCCCTGAAGCACGTTAATAAA Gene GeneID:537195|CREBL2:NM_001076088:110_cdna Constitutive 2 NULL GeneID:537195 5 GENE CREBL2 MGC139506 cAMP responsive element binding protein-like 2 EMBV3_42500 CTGGATTGGTGATGCTGGAGAAGTGGCATTAGGAGGGAATACTCTCAATAGGACAGCACC Gene BVT0102_182923 + 0 NULL GK000029.2:33618761-33679905 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163589 TCONS_00163588 TCONS_00163585 1 XLOC_099945 NonCoding TCONS_00163585 XLOC_099945 NonCoding NonCoding - 29:33624570-33629080 - TSS122565 2786 4 TCONS_00163585_5 66 0.455850681981335 3 0.382789975604347 0.000145338055806578 0.000719778333287602 0.000800834114282127 0.00049366481772378 7.68580465104409e-05 0.000172510169713973 0.000103042727768525 0.000176704971372415 0.000450698941405547 1.98979550489413e-09 9.36103184244142e-10 1.24559336873917e-23 4.54395706728934e-10 0.000268933761511922 7.55523359271234e-05 0 0 0 0.000419119793880321 0.00180719687547172 0.000433852523974457 0 0 0 0.00100886871649404 4.23824056053569e-07 4.21930908261966e-05 0 0 0 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 2e-78 298 84.44 0.092964824120603 0 noncoding 0 0 0 0 -1.02801924235411 0.0276105649860636 -0.1209931157048 0.131631737856066 CCTCACCGAACCTTTTTCCAAGCTCCCCTGGACTGACCTTATCAAGGAGTAATCCAGACACTCCAGGACGGACCTTCTCAAGGCCTTTTCTTGAAACCCCAGGACCTATGTTGCAGGTCCCCAGCTGCAAACTCTCACTCCTCTCAGTAGTTGATTTCCTCGCCTCCCATGAGAAAGGACAAGACCATCTTAGAAAGAAGAAATAAGACTGCTACCAAGCAGGGTCCTTGGACTCTTTAATCAATAGGAATTGATCAGAAGGCAGAGGACTGAATTCAGGGAAGGTTTAATAAAGCAGGGGCCTCTGCTGCAGCAGAGAGAAAACAAGTAACAGGTGTCCTTGCTGTTCCTTGAGGTGGTGAGCTGCTCCCTTAATTAGGGTGGAGTTCAGGATTGTTCCAGGGGTTATGCTGGCATGAGGATTAGGTGGTCTGCCTGCCCCCTTGTTAGTACCGTGTGCAGGGATCAGGCACAGAACCCTGGTTTCGCCCCTGGCACCTCAGAAGAGGCAGCTGGGTTTTGGCTCTCTGTATCTTGTTGAGAATTTGCCCCGACTGTGTATGCAGTTATTTTTAGTCCCTTATAGTTTTTTTGTATCTGTTGCTTGGGAAGAAGTTTGTCCAGGTGCAAACACTTCACAAACGGCCCAGGTCCCAGCTTGTCTTAAAACCAGAATTTACTCCATGGCAAGTGTGCTGCTTATATAGCTGCATTTAAACTTGATGGCGACCTTGTGAGAGGCAAGCTGTTATCATCCCCGTTTACAGGCTTCCTTGGTGGCTCAGATGGTCCCAGGGATGTGCACCGTCAGCAGCAGAGACCAGAAAGGCTGTTAAAGGACCCACGACCCTCGAACTCCTGGAAGCTCCTGGATGACTACTCAGGGTTCATGAGGACTCGGAAGAGTGACAGAGTTTTAATCCACATCCTGAAGACCTCCTACTTTTAAAAATAAGCCAAAATATCAGACTATTGATAATGGAGGAAGACAGCATTTTCATTTCCCAGCTGCCCTGCGTACTGGTGAGAAGAAGGTGCACCTGGCTCCATGAGGGCCACCCCGCTGTTCCTGGAGGGGCTGAGGATCAGCCAGGTAGCTTTGCAGGCCTAGGAGATGCTCAGGAGGATCACAGCCAATTCTGAGGTCTTCTCTGATAATAACACCAGTTTAATTACAGTCCAGAGTGTAAATTCCAGTTTGCTTATATTTCAAATGTGTGTTTCATTTCAAATGTGACTTTCCAGCTCCTTCTCTCTCCTTTTTTTCTCTCTGTGGCATAAAATATTTGCATATTTGAATGTCAAATTCTCCAAGTGCTGGAAGCAACAGGCCCTGGTATGTTCTTGAGTTATTTTGTACAGCAGCATCTGTCTTGTTTCAGCAGCCACCAGAACTGAGAAATGACCCAAGAGCAGCCTGCCAGGAAGATGGAGGGTGGGATCCAAGTGGGAAGGGGGTCCCTCTGAAATGGAGCCCATCGGGACTGGGGCCCTGCTAGTCCAGGCAGCTTCAGAACAGAGGTTTCCCCAGCTTATTTTTATTTATTTATTCATTTTAAAAGAAAGGCAGATTACCAGAGGAAACAAATACTGAATGACGGCTACAGAATGTATCTTTGGAACTTGCTAGACTAATTATGGAAGCTCCAAAATCACTTTAAGAGCAACACATTTTGTTTTGCAATATACATTCTTGTTGCCAAGATTTTTGGGGGGGAATTTCAATCAGAGTCCATCTCAAACTGGATTGGTGATGCTGGAGAAGTGGCATTAGGAGGGAATACTCTCAATAGGACAGCACCTTTCAAGGAGTTTCCTGACTTTTTTCTGTATACACATGCAATATTTCCTGCCATATCCTTGGGCAAGAAATATCACAGCTATCAGTGATTTAGGCCTCCAAATGTGAATGAGGATTCCCAAAAGGTAACCCAAAGCCTGTGATCCAGCAGATGCCACCTGCCCTCCCTCCCGCTACCCCTCCCCTACACACAGTGATTGTTAAGGAGCTGTGGTTAGGGGGTAATGCAAGAAGCAGCCATCTGCCACACCTTCCACTCCTTGTGGTGAACAAGGAATTAAAGATGTAAACAATTAAGAAACAGGATTTCGCCCCAGATAGTATTCTTGGGGTTCCCTGGTGACTCAAATGGTCAGAATCCACCTGCAATCCAGGAGACCTGGTTCAATCCCTAGGTTGGGAAGGTCCCTTGCAGAGGCATGCAACCCATTCCAGTATTCTTGCTGGAGATCCCAAGGACAGAGGAGACTGGTGGGAGAGAGACAGAGCTACTGTCCATGGGGTGCAAAGAGTCGGACACGACTGAGTGACTAAGCACAGCACAGCTGAGGTACACATGAAAAGAATGAATTCAGTGAGCACAGAGGGTTGCATCTTCCCATATATAGAAGAATGCTGAATTCCTTAGCTTGATATCTGGCTTTCTTTATTACTTAACAATAATATCTGATGTTCAAACTTCCTGCCCCCTTTGTTGCAAACTTGTATATAGCCTGGTTATATGCAACCATTCAATATCATGGTAATCGAAGTCTATGCCCCAACCACTAATGCTGAAGAAGCTGAAGTTGAATGGTTCTATGAAGACCTACAAGACCTTCTAGAACTAACACACACAAAAAAACACTAACACCATCATAGGGGACTAGAATGCAAAAGTAGGGAGTCAAGAGGTACCTGGAGTAACAGGCAAGTTTGGCCTTGGAGTACAAAATGAAGCAGGGCAAAGAATAACAGAGTTTTTCCAAGGGTCATAGCAAACACC TCONS_00165009 r 5' 47232 TCONS_00165009 r 5' 47232 EMBV3_21508 GGGAAGTAGTTCCTCATGGCGGCCAAGGAGAACGACTTTGACCGGCTGGTGCTGCAGTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32601 TCAGAGAACTGTGTGAAGAAAACCTGAATCCCAATGCTCATCCAAGGCCCACCTCTCAGG Gene GeneID:526435|DLGAP1:XM_002697739:231_cdna Constitutive 0 NULL GeneID:526435 24 GENE DLGAP1 NULL discs, large (Drosophila) homolog-associated protein 1 EMBV3_37088 CAGATACTAACTTTGATGGGGTGTGATGCTAGATAATGAGATCAGAAGGGTCTCTTGGAG Gene GeneID:538029|HERC1:NM_001103282:106_cdna Constitutive 2 NULL GeneID:538029 10 GENE HERC1 MGC142529 hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 EMBV3_01534 GGGGCACCTCCCCCACCTCCACCATCAACATCAATTAGAAACGGCTTCCAAGATTCTTCA Gene GeneID:540304|WIPF1:NM_001076923:40_cdna UTR3_Alt 2 NULL GeneID:540304 2 GENE WIPF1 PRPL-2 WASPIP WAS/WASL interacting protein family, member 1 EMBV3_19054 GACATATCTATATAAATTGTCTAGCTGGGGCAGGGCCTTCAGCTATCATTTGGTTAATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37999 ACTCGTCCCTACGATGAGTGCCAGAACATGCAAGACGAAAGAATGGCAGCAAACGTTCTG Gene GeneID:780846|LOC780846:NM_001079651:751_cdna Constitutive 0 NULL GeneID:780846 4 GENE LOC780846 MGC134341 hypothetical protein LOC780846 EMBV3_32366 TGGCCAACAAGGTGCCAGCTGCCGCCCGTGCTGGAGGGCGTCCGCAATGTTGCCAGCGTG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 398^705 11 EMBV3_14209 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_18024 GAGCTTTGCTCACGCCAACTCCACTCTCATTATCTCTTACCAGAAGCCAAAGGAGGTCCT Gene GeneID:516908|DPCD:NM_001075745:147_cdna Constitutive 4 NULL GeneID:516908 26 GENE DPCD MGC137186 RP11-529I10.4 deleted in primary ciliary dyskinesia homolog (mouse) EMBV3_27123 CCACACATGAGGAATGTGAGAGGAACAGCAGCCATAGCGTTGGCATTTAAACTCACCAGG Gene BVT0102_369722 + 0 NULL GK000027.2:5716283-5788752 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155849 1 XLOC_094855 NonCoding TCONS_00155849 XLOC_094855 NonCoding NonCoding LOC100296090 27:5739722-5963767 o TSS116541 309 1 TCONS_00155849_1 52 2 0.998629733445216 0.000212818290651619 0.000260153624809005 0.000324438897870511 8.06228398847997e-05 5.32598257499581e-05 6.84927122371082e-05 0.000105373382228405 0.000341356790430222 5.95802302839227e-05 0.00296848597678464 0.000440799143739848 0.000651684395364438 0.000886255442988347 0.008396651871502 0.00142449214232886 0.000427371859352313 0.000259690423109329 0 9.28274902620581e-05 6.62179212728114e-05 8.35071094536186e-05 0.000456287274005561 0.00134542728124018 0.000868070846429228 0.00028027814054598 0.000402815948717478 0.00017539578622653 0.00123769054239445 0.000162343791905679 0.000394006801960813 XR_240326.1 LOC101902094 PREDICTED: Bos taurus uncharacterized LOC101902094 (LOC101902094), 1e-38 163 97.89 0.3042071197411 0 noncoding CTTTGCCACAGAGATAGCGCACATGTGGATCCATGTCCACAGGTGATTCCTGTCTGGACCGGGGAGTATGATGTCTGAAGGAGCCTCCATATTGATTACAGACAATAGACTTTCTCACCTGAGGTGACATGCTGTTCCTTCCACATTCCACACATGAGGAATGTGGGAGGAACAGCAGCCATAGCGTTAGCATTTAAACTCACCAAGTTCACACTCACTGAAGTAACTGTCTGTAATCAATATGGAGGCTCCTTCAGGCATCACACTCCCCGGTCCAGACACAAATCACCTGTGGACATGGATCCACAT TCONS_00155845 s 5' 4456 TCONS_00155845 s 5' 4659 EMBV3_01049 TGGTGGCCGTCCTCTACTGCTTCCTCAATGGGGAGGTGCAGCTGGAAGTTCAGAAGAAGT Gene GeneID:523291|SCTR:NM_001099021:11_cdna Constitutive 0 NULL GeneID:523291 2 GENE SCTR MGC152300 SEC-R secretin receptor EMBV3_21384 GGCAATTACCAGCTCTCTACCACAGTCACCTGAGTACATCTATACCATCCACCCAGCTCA Gene GeneID:784069|LOC784069:XR_083969:109_cdna Constitutive 0 NULL GeneID:784069 19 PSEUDO LOC784069 NULL similar to heat shock transcription factor family member 5 EMBV3_24236 GAGACTGCAGGACTTCTACGACTCCACAGCAGGAAAATTCAGTCACCCTGAGATAGTCCA Gene GeneID:509282|HDDC2:NM_001075401:9_cdna Constitutive 1 NULL GeneID:509282 9 GENE HDDC2 MGC143232 HD domain containing 2 EMBV3_16398 CACCGCAGCTAGAAAAAGAAACTCATTTGTTCAGAGAGAAAGCTCGCTGTGTTCCCAGGA Gene BVV0102_120378 + 0 NULL GK000009.2:93668108-94351853 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01654 AGCAGTCTTAACCACCGGGCCACCAGGGAAGTCCCAAGGGAAAACCTATTTTAACAGCTT Gene BVV0102_029530 - 0 NULL GK000019.2:43700033-43714456 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097146 TCONS_00093980 2 XLOC_058181 XLOC_057316 Coding TCONS_00093980 XLOC_057316 Coding Coding RND2 19:43696265-43702667 = TSS70388 3948 1 TCONS_00093980_2 233 0.116008105369808 5 0.384002499609436 0.00017231424231208 9.63757209422833e-12 7.57815950781037e-05 6.7816401441281e-05 0.0002503320148806 1.4545123332202e-05 3.02531931588229e-05 0.000100371251106406 9.91873749580692e-05 0.00018462938710493 1.43659089656061e-05 1.29875048441628e-06 0.000148676579783871 3.49470075119771e-06 0.000138655125539275 0.000738885229711689 0.000756118300263893 0.000237114776895003 2.54417207390682e-10 1.17084677718178e-10 4.49383936751424e-12 0.000492853969582588 0.000163647807391702 0.000373808225592818 7.93810879767455e-05 0.000222209790845683 9.32753112285154e-09 0.000307137433840324 9.02890956751138e-05 0.000749841822519389 XM_005220712.1 RND2 PREDICTED: Bos taurus Rho family GTPase 2 (RND2), transcript 0.0 5726 99.97 0.804711246200608 NM_005440.4 RND2 Homo sapiens Rho family GTPase 2 (RND2), mRNA. 0.0 1620 82.13 0.410587639311044 TCONS_00093980_2 sp|P52198|RND2_HUMAN RND2_HUMAN Rho-related GTP-binding protein RhoN; 2e-157 441 96.14 0.995708154506438 3 coding 1 0 1 0 0.317922293257199 0.164685294077724 0.0430457776004772 0.612099386576574 AGCCCGGGAGGGGGGCTGCGCGGGGGGCCGGCGCGTAGCCGGGACTATGGAGGGGCAGAGCGGCCGCTGCAAGATCGTGGTGGTGGGGGACGCGGAGTGCGGCAAGACGGCGCTGCTGCAGGTGTTCGCCAAGGACGCCTACCCCGGGAGTTATGTCCCCACCGTGTTTGAGAACTACACCGCGAGCTTTGAGATCGACAAGCGCCGCATTGAGCTCAACATGTGGGACACTTCAGGTTCCTCTTACTATGATAACGTCCGGCCTCTGGCCTATCCTGACTCGGATGCTGTGCTCATCTGCTTCGACATTAGCCGACCGGAAACACTGGACAGTGTCCTTAAGAAGTGGCAAGGGGAGACTCAAGAGTTTTGCCCCAATGCCAAGGTTGTGCTGGTTGGCTGTAAACTGGACATGCGGACTGACTTGGCCACACTGAGGGAGCTGTCAAAGCAGAGGCTTATCCCTGTTACGCATGAGCAGGGCACCGTGCTGGCCAAGCAGGTGGGAGCTGTGTCCTACGTAGAGTGCTCTTCCCGGTCCTCTGAGCGCAGCGTCAGAGATGTCTTCCACGTGGCCACCGTGGCCTCCCTCGGCCGTGGCCACAGGCAGCTGCGCCGTACTGACTCACGCCGGGGACTACAGCGATCTGCTCAGCTGGCAGGACGGCCAGACCTGGGGAATGGGAATGGGAACGGAAACGAGGGCGAGATACACAAGGATAGAGCCAAGAGCTGCAACCTCATGTGAGGGGTCCTGTGGGAGGAGGCGGGGGGCCTGGGGCACAGTTGTCCCACTGCTGGTCCTGGCTTCCTGATCTCCTGACTCTATTTGGGACTTTAGGGCGGGCGAGTGAACAGTTCTCCCTGACAAGGGAGTTGGAGGCAGAAGGGTGCCACTGTTTCCCACATCCTCATTCCGCTCCTGTCCAAGGCAAGTGGAGGGAACTAGCAGAGCAGGCATCTGGGCAGCAGGCTGGGATGGGGCCAGGGGTCTGGGGAAGCCAGCAGCAAGCAGTGACCTTGGTTGAGTCTCAGTGTATGAGGGGTGCCTTCCTCCCCACCTCCAGTCCCCATATCCTGGTCCTGGCACGCTTCCCCAAGGAAAGTGTCCACTCTCTGACCTTCTTTCTTCCTCACCTCTCACTTCCACAGCTGTTCTCACTCATCCTAACCTCCAGGCAACATGCACTAAATTAAAAAGCAAATTGAGGAGCCTCTCCCTTTCCCCCTGCCCCCATCTACCCACCAGTCCTAGCTCCCTCCCTCCCTTCCCCCAGTAGAGTCCAAATAAAGCCCATGTCCATGGAAAATGACTGTGGCTTTAGTTTTGTTGCTTTCTTAAAAAAAAAAAATCTACCAGTGTCTAGTAGCTGGAGGGAAAGTTAGGCTTCAGGAAGAACTTCCCTGTCGATGCCCACAGATAGAGCAGAGGAAAAAACTGTGAGTTGGATCAGCAGTGTTCTTTTAGGAGCCAGAGGTGGGAGAGAGAGGTGTCTTGGGACTATTCATCTCAGTTAATGAGCCAGACAATCCTAACGCCATTAGGGGGTTTTATAGTGGACTGATGTGCAATTCATTACTCAGCCCAACTGGGGCCCCCGCTAATGTGGGAGGGGGCCTGCTGAAGTGGTCCAGGACCCTTGATCACTATCTCCAGCCCCAACTTGGAATCAGCTGGTGCCCTGGGAGCTCTGGGGTAGGACATTAAAAGCCTCTGCATCCAGCTGACCCCATGCAGAGTGAAGTTTCCCAAGGGGACAGTCATTTGATTCTGGGATCTCCTTGGTGGCTGGGGCAGGTGCTGAATCCATCTTTCCATCCTGAGCAACTTGATGATTTTGGAGGGAGCACAAGATAAGAGTCGAGGGTCACACCTCCTCAACCTCCGCTAGAGAAGGAAAGCCAGTGGAGGGACTGGCCAGAGTACTTGTTGTCAAGAAAGACAGTGCTGGTCTGTTTTCTCCGGAGTCTGGTTTCGCATTGTCCTGTATTCCTTCCCTGGCTCTGATCCCACTGGCCTCTTTTCGGTGACATTCTCCCCCAGGAACCATCCATGGCTCTCCCCTCCCCCAGCCCCAGCCCGTTCTTGAGACACACTTCTGGGAGAGAACACAGACCTTACCCTCCCATCTGCTGGGATCCCCCTCTTCTAATTCACAGCCCCTCCCTCCCTCATTCATTGAACAAGTGTGTACTGAGCACCAACTGTGTGCCCGACACTGGCCTGGGATTCTGAAAGGACTAGTCTTATACTCTGGAGGCCAGCCCAGTGGGGAAGAGAGGTACCCCCAGTGTGATGGCGCCTCATTTGTGGGAGCTCCTTACAGCCTCAGAAGCCCATCCTCTGAGCCAGGTCCTTGAGGGTTGAAGAGGAGTTTGCCAGGCAGGGAAGGGGTAGGAAAGGCACTCTGAGTGGAGGATATAGCATGTGTGAACACGTGGAGATGAGGAAGAGCATGGCACGTTTGTGGCTGCCATGGCGGGGAGAGAATAAGACAAGGCTGGGAAGGTACATTGATGCAGGCCCCGCAAAGGAACCAGGAGTTCATTCTGGGGATGTGAGGTGGCCAAAGAGGTTTCAAGCAGAAAATGAAGTGACCAGATTTGGTTTTTTAGATAGATGGTTGTTTGGATGAGGTGACCCAGGGTGGGGGTGGGGGCTGGGCTGGGGGGTTCAGCTCTGTGATGCTATTAAAGCTGTTAAAATAGGTTTTCCCTTGGGACTTCCCTGGTGGCCCGGTGGTTAAGACTGCTTCCACTGCAGGGTGCATGAGTTCCGTTCCTGGTCAGGGAACTAAGATCCTGCATGCTGCATTGTGTGGCCGAATAGCTTCTCCCTTCCCTTTGCCAGGGTCCAGTCTTAGAACCAAGGAAATCCCCACCCCCTCCTGGCTTGTCAGACACTCCATATTCTCCCTCTTCCTCTGAGACTCTGTCCATCTCAGCCAGTCTACTCAAGGATTCCGGGACAGCTTCAAGGGCACTGGGTACCCCACCCTCTGAAACTGAGACCAGTTTAGGGGCTAACTCCAAGATCCTCTGCAAGTCCTGGACCGAGGGCGCTGGAGAGGGCTGGGGCCCAGCTCTGTGGATCTCAGTCTGGCCCTAGAGGCCTGACCCTTCCCCAACGGGGGCCTGACTACCATTGTCTTGGGATTTGGGGGCTGTGGCTTCTCATCACTTTGGTACAAAGCAGGCTCAAGCCTGTAGCTGCCAAAATACATCCCAACCTCCCTCTCCTGCCAGGCTCAGGGAGCGCAAATGCATTTCAATATCTGCCTAAAGCAAACATAATTAGGAAGATAAATCAGCTGGAGGAACCCCCAAAGTTTAATACATTTCCAGTACCACCGGGAACAGATTTTTGTCCCCTCTGCAGGTCTGGGCTGCCAGACGTTTTATTTGCACGGAGGAGGCTGTGCCTCTGGGCTGAGGAGCCCAAAGGATAGGAGGAGGGAATGGGACTGTTCCTGTTCCTAGATCCTCAAAGGCCCCTGCTGGCTGGAATGGGGGGGATCTACCCCCACCCCAGATGCAGAAGTCAGACCCAGCTTCCTCCCCTGCAGCTGTTTCCCCCACAAATTAGACACTCCTTTGGGAAACAATGTAGCCTCGTTAATCATTTAATGAAATAAACAACTAATCACACTGTGATGCCGCCAGTGTTTCTTAACACACTCCCCCGCCCCCAATCAGCCTGCCTTGGAGGGAGGAGGGGAAGGAAGGGATGGCAGAGGGGAAGAGCCTACAGCTGACAGAGGTTCATTCCCCTCAGGACCCCAGCCTTTCCAGAAGGGACGGTCTTGGAAAGTGCTTGAGATCTGGAGGCAGAGGTCCAAGGGTCTGGGTCCCCGCTCTGCTGCTGCTTCCCTGGGGAGCCTTGGAGGAGCCCTGCACACGTCTGAACCTCGGTTTTCACACATGGAAAAGGGAGTTGATGGCCACATC EMBV3_08198 GGAGGCGGCGGCTGCAGTGGGTGGCGCGCAAGAATAATAAGGCTGTCTGCAAAGATTTGA Variant GeneID:504481|SC4MOL:NM_001098863:19_cdna 51^122 3 EMBV3_40630 GeneID:504481 17 GENE SC4MOL NULL sterol-C4-methyl oxidase-like EMBV3_25213 GTTGGACGTCTTACCCTTTGTCATCCCTCATCGACCTACCAATGTGGAAAGTTGTCCTGA Gene GeneID:529405|ENPP3:NM_001075923:12_cdna Constitutive 0 NULL GeneID:529405 9 GENE ENPP3 MGC151879 ectonucleotide pyrophosphatase/phosphodiesterase 3 EMBV3_04755 GTGGCTGCTGAAGGTATATTTTGCTGCATGCCTCATTACACAGTAATGGCATTCCCAGGC Gene BVT0102_233268 - 1 EMBV3_35042 GK000018.2:41414919-41990974 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22987 CCCGAGAATTCATGATCAAAACCCGTCGTAGAAAGGGCCTGAGTGAGGATGTGAGCATCA Gene GeneID:509425|EFTUD2:NM_001083396:227_cdna Constitutive 0 NULL GeneID:509425 19 GENE EFTUD2 MGC137887 elongation factor Tu GTP binding domain containing 2 EMBV3_27421 ACTGTCTCCCATTTTATTACACATTTTAAAGCCAACTAATGAAGGCAGCTGAGTCCCTCC Gene GeneID:535311|HOMER1:NM_001076052:218_cdna Constitutive 2 NULL GeneID:535311 10 GENE HOMER1 NULL homer homolog 1 (Drosophila) EMBV3_29902 GGTGGTTTTGTTCTTTGGACCCTGCATCTTTGTTTACATGTGGCCATTTCCCACGGTGCC Gene GeneID:787247|LOC787247:XM_002690698:326_cdna Constitutive 0 NULL GeneID:787247 10 GENE LOC787247 NULL similar to olfactory receptor 1276 EMBV3_17420 GACAGCTGCTATTGAGTGGAGAAAGATCGCCAGAGTGGAGAAGTGCTGAAGGTGAACATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23177 CACCACTTGAGAGGGAGAAGTGGGTTTGGCCTCACTGTACCTTCAGGAATAGAAGGGGAT Gene BVT0101_020931 + 0 NULL GK000005.2:108553858-108610741 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196349 TCONS_00196348 1 XLOC_118314 Coding TCONS_00196348 XLOC_118314 Coding Coding FBXL14 5:108606813-108613565 o TSS146132 3505 1 TCONS_00196348_1 474 0.283880171184023 2 0.481113909050511 1.77129764445984e-08 0.000167637612851198 1.38570556987968e-08 1.82530673818634e-09 2.04405481564173e-05 6.2929073499601e-08 8.23995616926339e-09 1.66532181775969e-06 5.17359710742625e-05 1.35246989147708e-13 2.08325968083529e-06 6.88820945640791e-23 1.43144919064311e-05 9.66315368917116e-08 6.03521061555328e-07 0.000403096639813621 1.706483972266e-35 0.000101992801444566 0.000208373329292246 0.000229497923185378 2.05099185587119e-05 0.00015585037815229 5.94194904329864e-06 0.000220995223320644 0.000436057053391013 8.4450143637948e-05 1.28772962137813e-06 2.62476879744348e-05 3.71422002039694e-08 0.000410597463706416 XM_005207274.1 FBXL14 PREDICTED: Bos taurus F-box and leucine-rich repeat protein 14 (FBXL14), transcript variant X6, mRNA. 0.0 2735 99.67 0.434522111269615 NM_152441.2 FBXL14 Homo sapiens F-box and leucine-rich repeat protein 14 (FBXL14), 0.0 1912 94.06 0.35206847360913 TCONS_00196348_1 sp|Q17R01|FXL14_BOVIN FXL14_BOVIN F-box/LRR-repeat protein 14; 0.0 795 100.00 0.841772151898734 6 coding 0 0 0 0 -0.907152839507641 0.000955417290556184 -0.0618389190726202 0.412218666201328 CGCGGCGCGGCCGGCCAGCCGCCTCGTCGCTCGGGCGGGAGCGGGGCCCGCGCCTCCTCCCCGGCGCCGCGGGGAGGAAGATGGAGACGCACATCTCGTGCCTGTTCCCCGAGCTGCTGGCCATGATCTTCGGCTACCTGGACGTGCGCGACAAGGGGCGCGCGGCGCAGGTGTGCACGGCCTGGCGGGACGCCGCCTACCACAAGTCGGTGTGGCGGGGGGTGGAGGCCAAGCTGCACCTGCGCCGGGCCAACCCGTCGCTGTTCCCCAGCCTGCAGGCCCGGGGCATCCGCCGGGTGCAGATCCTGAGCTTGCGCCGCAGCCTCAGCTACGTGATCCAGGGTATGGCCAACATCGAGAGCCTCAACCTCAGCGGCTGCTATAACCTCACCGACAACGGGCTGGGCCACGCGTTCGTGCAGGAGATCGGCTCGCTCCGCGCGCTCAACCTGAGCCTCTGCAAGCAGATCACCGACAGCAGCCTGGGCCGCATCGCCCAGTACCTCAAGGGCCTGGAGGTGCTGGAGCTGGGCGGCTGCAGCAACATCACCAACACCGGCCTCCTGCTCATCGCCTGGGGCCTGCAGCGCCTCAAGAGCCTCAATCTCCGCAGCTGCCGCCACCTCTCGGACGTGGGCATCGGGCACCTGGCCGGCATGACGCGCAGCGCGGCCGAGGGCTGCCTGGGCCTGGAGCAGCTCACGCTGCAGGACTGCCAGAAGCTCACGGACCTGTCCCTGAAGCACATCTCCCGGGGACTGACGGGCCTGAGGCTCCTCAACCTCAGCTTCTGCGGGGGCATCTCGGACGCCGGGCTCCTGCACCTGTCGCACATGGGCAGCCTGCGCAGCCTCAACCTGCGCTCGTGCGACAACATCAGCGACACGGGCATCATGCATCTGGCCATGGGCAGCCTGCGCCTCTCGGGGCTGGACGTGTCCTTCTGCGACAAGGTGGGGGACCAGAGCCTGGCTTACATCGCGCAGGGGCTGGACGGCCTCAAGTCCCTGTCCCTCTGCTCCTGCCACATCAGCGACGACGGCATCAACCGCATGGTGCGGCAGATGCACGGGCTGCGCACGCTCAACATCGGCCAGTGCGTGCGCATCACGGACAAGGGCCTGGAGCTGATCGCGGAGCACCTGAGCCAACTCACCGGCATCGACCTGTACGGCTGCACCCGCATCACCAAGCGCGGCCTGGAGCGCATCACGCAGCTGCCCTGCCTCAAGGTACTCAACCTGGGCCTCTGGCAGATGACGGACAGTGAGAAGGTAAGAATACTGCTCGCCTTAAGTCAGCCAGCCACTGAGTCCAGGCCCTTCTGCTCCCCAGGAAGGATCCGCTACAGACTGCACCTTGGTTTCATGGAAGGTGACCTCCCGGAAGTGAGTGCTGGCTGCCTGAATGCAGGATGGACAAGCTCAGGCCACAGGGCACCACTTGAGAGGGAGAAGTGGGTTTGGCCTCACTGTACCTTCAGGAATAGAAGGGGATGCTTTTAAAGAAGAGCAGCACTTAGAACTCGAGTGGATACGTCATTTGTGGGTGGTACACACATTAAGAGGCACTGCAGGGCAATTTTTAGAATAACAGAAAAAAACCTGGCTGGGGTGTTTGCTGAAACTTCAGAACTGACAAACCAAAATAGGAACTTAGTGTCAACCTTATCGTCTAGAAGCAACAAACCTCAGTAGGAACTGTCTGGGTGGCAGTCGGGAAAGGGTTCCCCCTGCTTATCCACAACACATGGGGCAAGAGTGTTGCTTAAAAGATGACCTAAGCGAGGGCGGGGTTCAGGCAGCACCTGCAGCCCCTCCAGGACCAGGACAGGCCCCTAGCTAAGAGTGCTGGGTATCCCGGAATAACTCCCCTCCTCAGATTCCTTCCTGCCCAATTCCTCCATCCTAAGGTGCAGGGGTAGGGGCCGGGGAGGGTGGGGGGGCCCACTTGATTCATTCCGAGTTTGGCAGCAATGACAAGGATGCTTGCTCAACTTACGGTACAACCTTAAATAGTTCAGAAAATTCAAACTGATCATATGCTTTCATGATTCAAATCAGCCAACAGAGATCTGAAAAAGCAAAGGTTCCTTTTATGGAAGGTTTTTTTTTTTTTTTAAATATTTATCAGGCTACGTCGGGTCTTCCTTGCACCATACATGCGCTTAGTTGCTCTGAAGCGTGTGGGATCTTAGTTCCCTGACCGGGGGGACCAGGGATTGAACCCACAACCCATACATTAGCAAGGCAGAGTCTTAACCACTGGACCAGCAGGGAGGTCCCAGCAGTTTCTTTTTAAAGCTAAGAGCCTTCTCTTAAATGGAGACATATGCAAACTAAAGCACGGCCTTTCCCCCACTTTCCCAAAGTGGCTACTAGACAGGTGCTGATCTCCAAATATTAGTAAAATCTTTTCCTTCTGACTTTGAGAATTTGAACTTAGGTTTTCAAAGCCAGAGAAGAGGGTCAAGGACCCCAGGGAACACCGTGTTCACAAAATATTTGTGCTGAGTTGTGTCCAACTCTTTGCAACCCCATGGACTCTAGCCCGCCAGGCTCCTCTGCCCATGGGATTTCCCAGGCAAGAATACTGGAGTGGTTGCCATTTCCTCCTCCAGGGGATCTTCCCAACCCAGAGATCAAACCCCCATCTGTCAGGCAGATTCTTTACCACTGTCCCCCTGGGAAGCACAAAGAATTTTGTTGTTGTTCAATAACTAAATCATGTCCGACTCTTGGTGACCCCATGGGCTGCATGCAGCGTGCCAGGCTTCCCTGTCCTTCACCATCTCGCAGAGTGCACAAATTCATGTCCATTGAGTCCGTGATGCTAGCTAACCATCTCCTCCTCTGCTGCCATCTCCATTTGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTCCAATGAGTTGGCTCTTCACATCAGGTGGCCAAAGTATTGGCACTTCAGCATCAGTCCTTCCAGTGAATACTCAGGGTTGATTTCTTTTAGGATTGAGGAGTTTGATCTCCTTGCAGTCCAAGGGACTCTTAAGAATCTTCTCCAGCGCCACAATTCAAAAGCATAAGTTCTTCGGTGCTCAGCCTTCTTTATGATCTCACATCCATACATGATTACTGTAAAAACCATAGCTTTGACTGTAAGGACTTTTGTTGGCCAAGTGATGTCTCTGATTTTTAATATGCTGTCTAGGTTTGTCATAGCTTTCCTTCCAAGGAGCAAGCGTCTTTTAATTTCATGGCTGCCGTCACCGTCCGCAGTGATTTTGGAGCCCAAGAAAATGAAATCTGTCACTGTTTCCACTTTTTCCCCATCTATTTGCCATGAAGTGATGGGACCGGATGCCACGAATAACACTCTCTTATTAAGAGATCAGATTTGTAACCAAAACCCAGACCTCCTACAGCTTCTGACAGCAGCCCCTCTGCTCCCAGGGCCCTGCTGTGGCCACGGGGCCAGTGGTCGCCCCTCTGCTGCCCTCCTCCCCCTGCATCAGTTGTCAC TCONS_00196351 s 3' 1698 TCONS_00196351 s 5' 0 EMBV3_33542 CACGTGTGTTTGCCATGTTAACGGGTCCTTTCCAACCCAAGAGGTACATTTGTTCTTGTT Gene GeneID:100139799|GPSM1:XM_002691658:397_cdna Constitutive 0 NULL GeneID:100139799 11 GENE GPSM1 NULL G-protein signaling modulator 1 (AGS3-like, C. elegans) EMBV3_12644 GTCTCATGCTCCCCTGTATCATCTGTTCCAGTCTTGCCGTGTGATGGGAACGTGCTTGTA Gene GeneID:616148|LBH:NM_001099152:77_cdna Constitutive 0 NULL GeneID:616148 11 GENE LBH MGC148436 limb bud and heart development homolog (mouse) EMBV3_05343 TCTCCTGTCCGGGGAAGAAAGAGCCGGTGTTTATCCTTCACACACTCATCTGCGAGATCA Gene GeneID:618792|WWOX:NM_001078092:68_cdna Constitutive 0 NULL GeneID:618792 18 GENE WWOX NULL WW domain containing oxidoreductase EMBV3_24704 CAAAGTGTCTCAGTAGAATCTTGTTGATCTGTAGGTTTCCCCAACACTTGTCACCCTAGG Gene BVV0101_087540 - 1 EMBV3_05750 GK000003.2:17434502-17495201 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01895 CAAGGCCCGACGAGAGGCAAAGGTCAAGTTTGAGGAGAGATACAAGACGGGCAAGAACAA Gene GeneID:404137|RPL27:NM_001034051:58_cdna Constitutive 0 NULL GeneID:404137 19 GENE RPL27 MGC127451 ribosomal protein L27 EMBV3_08208 GCAGAAGAAACGGACCCCCACCAAGAAGGAGAAAGACCAGGCTTGGAAGACTCTGAAGGA Gene GeneID:510184|TADA3:NM_001024511:74_cdna Constitutive 1 NULL GeneID:510184 22 GENE TADA3 MGC133915 TADA3L transcriptional adaptor 3 EMBV3_36586 TCAGAGAACGAAGGCGACCAAGAGAGAAAAGAAGATCTACGGGAGTTTCGTTTTGGACAC Gene GeneID:538606|PPP1R12A:NM_001102217:5_cdna Constitutive 0 NULL GeneID:538606 5 GENE PPP1R12A MGC148828 protein phosphatase 1, regulatory (inhibitor) subunit 12A EMBV3_27509 ACACTAGAGCATGGGACCAGCTTGAAAACTCTCTACCGGAAGTCAGCAGCACTAGACAGT Gene GeneID:541071|NCOA7:NM_001102254:18_cdna UTR3_Alt 3 NULL GeneID:541071 9 GENE NCOA7 MGC151725 nuclear receptor coactivator 7 EMBV3_33839 AGAAATTGAGTCTCCATCCCAGTCTTTGACAGCTTCTGCAGACCCCAGCAGCAAAGGGGA Gene GeneID:511230|DENND1C:XM_002688881:116_cdna Constitutive 0 NULL GeneID:511230 7 GENE DENND1C NULL DENN/MADD domain containing 1C EMBV3_01602 TTGCAAGATAGTTGATTTGCTCCAGTCAGGACAGTGGTTAGTTTTTCTTCCTGGTGGGGC Gene GeneID:100295610|LOC100295610:XM_002684796:153_cdna UTR3_Alt 2 NULL GeneID:100295610 1 GENE LOC100295610 NULL similar to mucin 13, cell surface associated EMBV3_05406 ACCCAGTCACCCCGGACGCTCCGCCAAGGCCCCAGGCTCAGGAGTCCAATTATGAGAATT Gene GeneID:522776|SIGLEC15:XM_002697755:275_cdna Constitutive 0 NULL GeneID:522776 24 GENE SIGLEC15 NULL sialic acid binding Ig-like lectin 15 EMBV3_21764 GATGAACTTTCTAACCTGAAGAAGAACAGGATACATTGGATGAGCTGAGGAAAGAATATC Variant GeneID:539672|ASNSD1:NM_001034680:42_cdna 218^293 1 EMBV3_37237 GeneID:539672 2 GENE ASNSD1 MGC127470 asparagine synthetase domain containing 1 EMBV3_10544 CTCATCAACGCCCATTCACTGGACCCAGCCACCCTGTATGAACTGGAAGAACTGGAGACA Gene GeneID:509856|RNF31:NM_001101918:110_cdna UTR3_Alt 2 NULL GeneID:509856 10 GENE RNF31 MGC142809 ring finger protein 31 EMBV3_04949 GGGAAGCCAACCCCATGATTGCCTGTTTAGAGTCCACTCCAGGAAGCAAATGGCCCTTAA Gene GeneID:516784|BPIL2:XM_002687671:49_cdna Constitutive 0 NULL GeneID:516784 5 GENE BPIL2 NULL bactericidal/permeability-increasing protein-like 2 EMBV3_17605 GGTGTAAAAAAACACACACGCATACACAAACCTTTGTAACATATTGTGACCAAATGGGCC Gene GeneID:540904|SMARCA2:NM_001099115:8_cdna Constitutive 2 NULL GeneID:540904 8 GENE SMARCA2 MGC148877 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 EMBV3_19188 ATTTGAAAGTCTTCTTATAACACAGGTTGCGGGGAAAGGCCAGGTCCAGAGGCATCCTCC Gene BVV0102_118343 + 0 NULL GK000018.2:19293985-19322170 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00088853 1 XLOC_053639 NonCoding TCONS_00088853 XLOC_053639 NonCoding NonCoding - 18:19297215-19298517 - TSS66199 1302 2 TCONS_00088853_3 61 1 0 0 0 0 0 0 0 0 0 6.06000845619439e-06 0 0 2.74630063630541e-06 0 0 0 0.000943270155137611 0.00372978684549736 0.000539590056007655 0 0 0 1.13988858011049e-05 7.04611504472716e-06 6.43804553075746e-05 0 0 0 5.90180040180597e-05 0 0 XM_005218683.1 CYLD PREDICTED: Bos taurus cylindromatosis (turban tumor syndrome) (CYLD), transcript variant X1, mRNA. 0.0 2345 100.00 0.997695852534562 XM_005255811.1 CYLD PREDICTED: Homo sapiens cylindromatosis (turban tumor syndrome) (CYLD), transcript variant X1, mRNA. 4e-147 526 69.44 0.993855606758833 0 noncoding 0 0 0 0 0.0140624623972034 0.896758833796397 0.0405172375874434 0.448216112986924 GGAAACCAAAGAAATGGAAAAATGAAATTGTTATGCAAAGTTAAAAAAAAGTAGACTAGCTGCTATTTTATGATGAAAATCTTAACCCTAATATGGGAAGATTTTTTGTCATAAAGTAAAATGTCCTTGTTCAAGTAGGGGGACTGTAGGTTCATAGTGAAGAATAAGACTGCCTTTTCTAGGGGGTTGGTGATGTTAACACACCCACAATTCTTCAATGAAAATAATACTTGAATTCCCCAAGGCAAGTGAGGGTGGAGAAGGAGGAGAGCATATTAAGATGGAAATATTCAGATGCATACTAAGATGCAAGAGAGAGAGGGTGGAGGATGGAAGGCCACCCTGACAGCAGGTGTGGTACCCGCTGGGGGCTGTAAAAGTGGGTTCTCCTCTACCTCCCAGGCTGTGTCACTGCTCAGAGACTGGGACTTCAGAGAGCCAGGCTTCTTTGCAGCAAGTCAGCATTGCATTGTCTAGTTTCCTTTCAGAAGCTTTATTGGAGGAAAAAGAGGGGGAAAAAAAGACTCTTCATCTTAGTCTAAATCCTCAAACAGCTGAAGGGTCTCTCTTGAGTTTGAAAGTGGTGGTAAAAAGCTAACCAGCGCATATGGCCAAGGATAATGAAAAGAGGGAAAAGAAAGACATTCCTTCTTCCTGCTCACAATAAATGTCAGTATTTGGAGCAGATCATTCAAGAAATACATTTGCTTTCCTGACTGTCTTGTCAGCGATGCCATTTTTGTTTACTGTATTTGAAAGTCTTCTTATAACACAGGTTGCGGGGAAAGGCCAGGTCCAGAGGCATCCTCCTTTGGAGCTCCACAGACTCAGATGTAATTCTCTTGCACTTTAAAGCCCTGTCCACTTCCACTTTTTATTTTTTCAGGAGATTGTGTGGGAGACTCAACTGTTCTTTTTATTTTAAAAAATGGCCTGTAGTACTCCAGAAAGTCTTAGTATCCTGTCATAAACATTCATTAAAAAAAAAAAAAAAAATCCCATTTGGAACTTCCCGGGGAAGTCATGGTGGTTAGGAAGTTGGTATAAAGGAGCACATTTTATATTGCATTTCCCATATTTGGTATCTTGTTCAACATTTTTTTTTTTTTGGCCTGATGAACATTCTATATTTATGAAGACATTCTTTAAAAGTAAAACCACATAAAATATCCCTTTATTATCAGATTGCTCTGATTTAGCCTTAATTTTGTTAAATTTTTTAGAGATGATTGAAGTGCTGCTGTGGAAAGAAATGTACTATATACTATTTCTGTATCATTAAAATTAAATTTTTATGGTTGT TCONS_00082522 TCONS_00082523 TCONS_00082524 TCONS_00082525 TCONS_00082526 TCONS_00082527 TCONS_00082528 . 3' 1953 TCONS_00082522 TCONS_00082523 TCONS_00082524 TCONS_00082525 TCONS_00082526 TCONS_00082527 TCONS_00082528 . 3' 3254 EMBV3_26130 GATGTTTAATCAAAAGAGACAAAACTGCTGAGGAGCTCGGGGCTGGATTGGCAGGTGTGG Gene GeneID:789851|LOC789851:XM_002692258:1565_cdna Constitutive 0 NULL GeneID:789851 13 GENE LOC789851 NULL similar to histamine H3 receptor EMBV3_07399 TTGATCCTCCTCCAGCATCGGCCTCAGGATGCACACCCACTTCCTGCCTCCTGAGGACCC Variant GeneID:514560|CHCHD5:NM_001037601:77_cdna 147^453 1 EMBV3_05517 GeneID:514560 11 GENE CHCHD5 MGC134601 coiled-coil-helix-coiled-coil-helix domain containing 5 EMBV3_17371 ACGTTTAAACAGCCATACTCCTTGTGCTCAACCTGCTTCCAAGGCATACAGTGCCTTCCC Gene GeneID:538291|INPP5B:XM_002686466:507_cdna Constitutive 0 NULL GeneID:538291 3 GENE INPP5B NULL inositol polyphosphate-5-phosphatase, 75kDa EMBV3_34210 ACCAACCTTTGTGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTT Gene GeneID:540148|LOC540148:XM_002697506:205_cdna Constitutive 0 NULL GeneID:540148 23 GENE LOC540148 NULL similar to histone cluster 1, H3f EMBV3_07440 CGGCACAACAAATGGAGGTAAGAGGTGCGTCTTTGTTAGCGTCCTCTAAATGCCAAGTCC Gene GeneID:536960|LOC536960:XM_002693123:547_cdna Constitutive 0 NULL GeneID:536960 15 GENE LOC536960 NULL similar to cytochrome b5 reductase 2 EMBV3_20659 TGCCGTCTTTATAGTGGGGAGCAGTGTGTCAGGGCACTTGCTTGCAGACCAGAGAAATCT Gene GeneID:616979|RAB31:NM_001076944:197_cdna Constitutive 1 NULL GeneID:616979 24 GENE RAB31 NULL RAB31, member RAS oncogene family EMBV3_30710 TTTCTTCCCGTCTTGTTCTCTTTGTGAGAGACTTTGAAGGCCAAGTTCTAAGGAAATAAA Gene GeneID:539387|MPZL1:NM_001076158:5_cdna Constitutive 3 NULL GeneID:539387 3 GENE MPZL1 PZR myelin protein zero-like 1 EMBV3_00663 CTGATCACCTAATGGAAAAGATCAAAGATCTAGAGACACAGCTCAGAACCTCAGACATGG Gene GeneID:282707|CEP290:NM_174722:32_cdna UTR3_Alt 3 NULL GeneID:282707 5 GENE CEP290 KIAA0373 centrosomal protein 290kDa EMBV3_25428 ATGGGTGGAGTGGCTGACAGTGTGATTGATGTAGGGATGGTCTTCAGCTTCCCCTACTGT Gene GeneID:618125|LOC618125:XM_002689042:122_cdna Constitutive 0 NULL GeneID:618125 7 GENE LOC618125 NULL similar to olfactory receptor MOR280-1 EMBV3_02893 TCCTTCCTCTCATCTTTGCCGTGTTGCTGCTTCTCTTCATGGTGGCCTCACTTGTGGCTT Gene GeneID:100138789|CD300LF:XM_002696211:266_cdna Constitutive 0 NULL GeneID:100138789 19 GENE CD300LF NULL CD300 molecule-like family member f EMBV3_08311 AGACCTGCAGCTTTTCTGGGCCTTGGTTTCTCCATCTACAACATGAGGGCATGGGATGTG Gene BVT0102_031438 + 0 NULL GK000005.2:104224269-104231626 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13529 CTCCCAGGAGAGGCACGAAGCCCTGAAGGAACTGATGGACCTTTATTTGAAGATGAAACC Gene GeneID:506302|RAG1:XM_002693521:4_cdna Constitutive 0 NULL GeneID:506302 15 GENE RAG1 NULL recombination activating gene 1 EMBV3_05515 TGACCTCCTGGGGATACGGCTGTGGAGTCAAGGATTCCCCTGGTGTTTATACTGAAGTCT Gene GeneID:512034|PRSS12:XM_002688059:8_cdna Constitutive 0 NULL GeneID:512034 6 GENE PRSS12 NULL protease, serine, 12 (neurotrypsin, motopsin) EMBV3_21461 GTTGTAGATTATTCCCTGTGGTGTGAAACTGACTTGAGCATGGCACTGTTGGCTGACAAC Gene GeneID:533927|TSNAX:NM_001076006:87_cdna UTR3_Alt 3 NULL GeneID:533927 28 GENE TSNAX MGC142669 translin-associated factor X EMBV3_32312 TAAGGAAGTTGAGATGACTTTGATCATGAATGAATCGGGCCTGGGCTGGTAGGTTTCTGG Gene GeneID:534869|KANK1:XM_002689629:64_cdna Constitutive 0 NULL GeneID:534869 8 GENE KANK1 NULL KN motif and ankyrin repeat domains 1 EMBV3_02219 CATCTCTCCCCAGCGGGTACTTGAACTGTGTATTCTCATCATAGTAATGTAGGGAACTCT Gene BVT0102_295804 - 1 EMBV3_43438 GK000010.2:202004-238869 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23704 AACAACTTTGTCAGATACTACAACAAGCAGCGAGTCCTGGAGACAGCGGCCAGGCATGAG Gene GeneID:505879|KCNF1:NM_001097987:60_cdna Constitutive 0 NULL GeneID:505879 11 GENE KCNF1 NULL potassium voltage-gated channel, subfamily F, member 1 EMBV3_20670 CCCGAAGAGGTACAGAGCGAGGTACAGCGCGTGTGGGTGAAAATGGAGTTTTGGAATTGA Gene GeneID:511317|TFAP2C:NM_001075509:991_cdna UTR3_Alt 2 NULL GeneID:511317 13 GENE TFAP2C MGC143174 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) EMBV3_29899 AATACTCTGCCTTCTAAGGCTGCCCTTGGATGAAGGACACCGCCACCTGATGAAGATCTT Gene BVT0102_155438 + 0 NULL GK000007.2:67796477-67916728 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22500 CCCTGGCGCTTAGGTTCTACCCTGCAGCAGGATGAGGATAACTTTATGAAGTTTGTAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32796 CCACATACAAATGAAGGGAACTGGATCCTCAATCTTACACCACACACAAAATCACCTCAG Gene BVV0102_265706 + 0 NULL GK000030.2:122410515-123604405 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38069 CGATGGTAGCCCACCTAGAAGCCGTTACAAGTTTAGCAGTTGATCCAAATGGCCTGTACT Gene GeneID:537010|STRN:XM_002691282:361_cdna UTR3_Alt 2 NULL GeneID:537010 11 GENE STRN NULL striatin, calmodulin binding protein EMBV3_02828 AGCGGGGTGGAGGGCTCTCGTCATCGTTTTCCTGGGCGGAATTTTGTGTTTCCTAAGCTA Gene BVT0102_043588 + 0 NULL GK000029.2:47553843-47566022 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165653 TCONS_00165652 1 XLOC_100584 Coding TCONS_00165652 XLOC_100584 Coding Coding ORAOV1 29:47565355-47572425 = TSS123698 1702 1 TCONS_00165652_2 137 5 0.759937756401188 0.00386296393216007 0.00145181784423038 0.00235251144954804 0.00348376933476454 0.00394372557605746 0.000974571000344966 0.00273530447034239 0.00266928267861671 0.00518329101222839 0.00223685770850003 0.000594244227081392 0.000560007846729799 0.000770438687604754 0.00063635200462507 0.000737755919535298 0.00352852143027411 0.000131323051033258 0.000225844474536022 0.0071153437640078 0.00527024892799391 0.00115460360704743 0.00126580544020863 0.00102495866600363 0.000638239013383879 0.00824667650218004 0.00420764239630815 0.00415992181952337 0.00110916155884913 0.000498909531623706 0.00242525928581478 XM_002684569.3 ORAOV1 PREDICTED: Bos taurus oral cancer overexpressed 1 (ORAOV1), 0.0 3070 100.00 0.999412455934195 NM_153451.2 ORAOV1 Homo sapiens oral cancer overexpressed 1 (ORAOV1), mRNA. 1e-141 508 80.28 0.330787309048179 TCONS_00165652_2 sp|Q8WV07|ORAV1_HUMAN ORAV1_HUMAN Oral cancer-overexpressed protein 1; 1e-90 263 89.78 0.992700729927007 1 noncoding 0 0 0 0 -0.479905484018627 0.0639536987529626 -0.0537195036000361 0.471103509276989 ATGGCCGGGGATCAGGACATGTTCGACGCTGTCGTGATGGCAGATGAGAGGTTTCACGGGGAAGGGTACCGAGAAGGCTATGAAGAAGGAAGCAGTTTGGGTATGATCGAAGGGAGACAGCACGGCACCCTCCATGGAGCTAAAATTGGATCTGAAATCGGGTGCTACCAAGGCTTCGCGTTTGCTTGGAGAGGTCTCCTGCACAGTTGCGCCACTGAGAGAGACAGCAAAAAGATGAAGGTCTTAGAGGCATTGATTGGGATGATTCAGAAGTTCCCTTATGATGACCCTACTTACGATAAACTTCATGAAGACTTAGACAGAATTAGAGGGAAGTTTAAGCAGCTTTGTTCATTACTGAACGTTCAGCCCGACTTTAAAATCAGCACAGAAGGTTCTGGACTTTCATTCTGAGGACAGATGAACAAAGACGGGACATCAAGGAGCAGAGGTTCACGTGTTAAGTGTTGAAAAACGTGATTAAAAGCAAGACAGTGGGGAGGATCCATCGTTTTGCAGGGTCGGGTCCAGTTTGGCCGGTGAAAGGGCCCCCTTCCCCGAGGTCCCCCCGTGTGGCCTGCGTCCTCCCCCGCGGGGGGCCGCTCTGCACAAGCCTGTCCTGGGTCGGGTCCTGTCTGCCCCACACTCTGGGTGCAGCCCTGGCAGAGCCCTCGAGGGCTGCCCGTCTCTGCTCCGGGGTCCGGCCGTGGGCACGTGGGTGCCTGCCCCCTGGCAGGCCTGGCTGGATCCAGACCTGGCTCCGGATGGAAGCAACACCCGTTACTCCTCGGGCTTTGCTCAGTGCTCAGAGGGCTGTTTTTTCAGAGATGAGGGGACAGGGTTGGCACGGCAGGAGTGACGGGTACTGTGGCGTATACTGGCCCTAGAGATGCACCAGCGCTTTGTGACCTGCCCCTGGTGTCTTATTTATTCCCTTCGGGAGCCCACGAGGCAGGCGTTACTCGTGGTTTATAGAGGAACCCGAGGCCTGAGAGACCGCCCGGTCCAAGGGCTGCAGGCGGCAGAGCTGGGACTCCGGCCCTGGCGCTCGCCCTGTCTCCTGGTGCCCTGGGACGCACGCTCGCACCCACAGGCCCGGGGTCCCCGCCCATGAACAGCGCTGTGCTCGTCGCCTCCTGTGCCGTGGACGTGGGCATCTGGCTGAGAGGAGGAGAGGCCGGCCCTGTGCCCGAGGAGCCGGAACGTGCTCTTCCGCGTCCCCGGGTGTGGGGTGGTACTCGTCGTTAAAAATAGTCCCAGGGGAGATCTGAAGGCCGTCGCTCTGCATGCAGGCACCTTGGGGTCACTGTGAGTCTAGTCCAGCTTTTAAAATCCTCCCAGAGCATCTGGGTGTGCTCTGCTCCCCTGGCAGCTGCTGAGGGTCCCTGCGGGGCCTGGATGTTGGGGTCCTGGGTGCCGAGGAGGGCGGGTTGGTGTCTTGAGGCTGATGGACGCGCTGTGGCTCCGTCCCGTGCGTCTCGCTGTGTGTTTCTGGCCTGAAGCCCCTTCTCAGCTCTGGGCGGGCCGGGCCTCGGCTGCGCCGTCGTCACAGAGACCACCAGCTCATCTCCGTCCAGCGGGGTGGAGGGCTCTCGTCATCGTTTTCCTGGGCGGAATTTTGTGTTTCCTAAGCTAGCTGTTTGGATAATGTATTATTTTTATAATTGGAGAAAAAAAATAAACAGCATATTTTAAAGCCAAA EMBV3_18726 AGGCCTAAGCACAGCAGAGGTCCTGGTACAGTATTTAAGTGTCAGCATACACAGGCGTAA Gene GeneID:528142|PSME4:XM_002691325:472_cdna UTR3_Alt 2 NULL GeneID:528142 11 GENE PSME4 NULL proteasome (prosome, macropain) activator subunit 4 EMBV3_39967 GAAAAAGAAATAGCTCAATTAAAGCATCAGGTGGCCTTAGACATGCATCTGCCAGCATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29553 AGTACCAGGACGCCACGGCCGAGGAGGAGGGCGAGATGTACGAAGACGATGAGGAGGAAT Gene GeneID:768070|TUBB3:NM_001077127:471_cdna Constitutive 0 NULL GeneID:768070 18 GENE TUBB3 MGC134115 TUBB4 tubulin, beta 3 EMBV3_15711 AATAGGGCTGGGAAGGGTCACCTGTCTACTGGAATTGGGTATCCCTCCGGATGATGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20227 GGATGTAGTCTTCAGTGACTTGAGGCAGCCTGCAGCTACTGAGGAGCCCGAAGGATATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20060 TCTTCCCCCAGGCTGCTCGGCAGGAGAGATATTCGTTCGTGATGGCATATAAATTAGCCA Gene GeneID:504909|ABCA10:XM_002696224:37_cdna Constitutive 0 NULL GeneID:504909 19 GENE ABCA10 NULL ATP-binding cassette, sub-family A (ABC1), member 10 EMBV3_03084 CTTTACTTGCTGTATGGTACCGGGTCAGACTTAACCAATGAGGCTTGGGGCGGACTGTCA Gene GeneID:784051|SDHAF1:NM_001110442:796_cdna Constitutive 0 NULL GeneID:784051 18 GENE SDHAF1 NULL succinate dehydrogenase complex assembly factor 1 EMBV3_08966 GATGCAAACAGAGGCACAACATGAACGTGAGCTCCAGAAGCTAGAGCAGAGGGTGTCTCT Gene GeneID:534620|TAOK3:XM_002694504:393_cdna UTR3_Alt 2 NULL GeneID:534620 17 GENE TAOK3 NULL TAO kinase 3 EMBV3_31357 GAGGGACGTGTTTGACGAGGAAGCTGATGAGTAGCTCCAGCTGAGGAAAAGATTGATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18326 CCAGGGTATTCTGAAGATCGAAGCCTGTGTGTAAAATGCTACCAAATGGCAAAAAGCAAC Gene GeneID:615156|TRA2B:NM_001034776:129_cdna Constitutive 2 NULL GeneID:615156 1 GENE TRA2B MGC128162 SFRS10 transformer 2 beta homolog (Drosophila) EMBV3_22844 TGCCATACACAATTTCATAGGGAGAAGAGCCGTGGGACTGTGGGGTCATCCTGAGTCTGA Gene BVV0102_431364 + 0 NULL GK000006.2:99892779-99966408 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00210440 TCONS_00099407 TCONS_00045930 TCONS_00251683 4 XLOC_128950 XLOC_059650 XLOC_026577 XLOC_154624 Coding TCONS_00210440 XLOC_128950 NonCoding NonCoding - 6:99896328-99899441 - TSS157947 3113 2 TCONS_00210440_6 66 0.2071956312239 1 0 0 4.16692430943643e-06 3.51767919418848e-06 6.66893396580193e-07 5.28662630114155e-07 9.57557012773005e-08 9.36669783030064e-07 9.50003456937147e-07 2.30416660297023e-07 1.32171558837221e-07 4.28962202436778e-07 0 0 1.0073905442798e-06 0 0.000646715941775947 2.13559418943302e-06 2.11576264116433e-05 1.15177138157445e-06 4.00422859766317e-06 1.3931146656797e-07 9.16824413681828e-05 0.000221763622423579 0.000820055663641855 1.33539543630992e-06 4.40074642371056e-07 1.55278427303824e-06 2.57125499268432e-06 3.2288886079287e-06 1.00949465532598e-05 XR_229807.1 LOC101907467 PREDICTED: Bos taurus uncharacterized LOC101907467 (LOC101907467), 0.0 2847 93.20 0.615162222936074 0 noncoding ATTTATATCAAATGTAACAGCATGACCCAAGTCTATTGACTGTAGGTCTTACACCAAGAGAGCAAGGAGAGGTTATGATTGACAAGAGAGAGGAAAGTCTCTTTTTGTCATCCCAGAAAAGAGCAGAATGGTTTAAAATCTCCTTAGCAGAGCAGTGACACCCACCAATGAAATCCATCCATCACTTACGGAGGCATAGCCCTACATATCCAGCAGTTGGAAGTGTTGTGGAAGTCTGCGTAGGAATGTGCCCATGAGATGAAAACATTGTCCTGAGTTGAAACGGAAGTTAAATTCAAAATCACGTTGATGAGGGCAAGCAGCAGGAGTTGATTGTGTGGCTTCATCCTGAAGAGGCTCGTCCAGGATCTTCTATTCCTTCTTCTTAAGGATGGTCTTAGTCTCTTGAGGGTCAGCGGGGTCCCTCTGTGCAGTCCACTGAGCGTTTTTTGGGTCTGCGTGGTATGTTCTCTTCACCCTCATATGATGGATCCAAGGGACAATACGTGCAACTTTAACTGCAGTAGGGGTTAAGGGCCCTTTCACCAAGGGGCTAGCAAATCATGTTTCCAATCTTTGACCCATACTTGGTCACCAAGCGTAAACTCATGAATCTGTTCCCCAAGGGAGAATGGCACCCTTTCTCATACAAACTTAGTTACCCGATTTATTACCTTACCCTGTTCCATCTGCTGTGAAATCCTATCCCCCCTTACCGAAGGCAAATTTGTTGACACCTGTTTTATTATGGGAGGGGGCCTGCCATACACAATTTCATAGGGAGAAGAGCCATGGGACTGTGGGGTCATCCTGAGTCTGAGCAAAGCTGTCGGAAGCAAGTCCACCCAGGAGCAATCAGTCTCTATGATCCACTTGGAGAGTCTCTATAATGTCTGGTTGGTTCATTCCACCATCTCAGAATTCTGGCCTATATGCAGTGTGCAGTTTCTATTTGATGTTTAAAGTTTTGCTTACTTGTTATACTAACTGAACTGAACTGAAGTCGCTCAGTCGTGTCCGACACTTTGCGACCCCGTGGACTGTAGCCTACCAGGCTTCTCCATCCATGGGATTCTCCAGGCAAGAATACTAGAGTGGGTAGCCTTTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCCAGGTCTCCCGCATTGGAGGCAGACGCTTTAACCTCTGAGCCACCATAAAAAAAGCCAGGTCATTGTCTGAACCAATGCTGGTAGGAAGTCCAAATCTGGGAACTATTTCCCTAAGCAGGCACCAGGCTACTTCTGATGCTCTTTCAGTCCAGGTAAAAAAGTTTCTACCCATCCCGAGAACATACATACCATGACCAGCAGGTAATGGTAGTCGGTGAGGTTTCATTTCAGTGAAGTCCACTCCCAGGTGTTCAAAGGGCAGCGTGCCTTTCAGCTGAATACCTGGAGGTTTTTGCCTGAATACCCGAGAGGCAGCATTAACCTGTGAGCAGGCAGCATGGCCTAGGTGGGTCGCTTGGTGTGTTTGGCTTACCAGATTGTGTGCCAGCTCCTCTGGTGCCAATAATTTGTCACTTGGCAATTCCCACCATCCCTTTTCAGTTTTGATGGCCCCTTCCGCTTTGGCTAACCTGACAGCCATTGTCCTTGTTTTATCAGGCTAGTGCCATCAGTATATAGGACCCAACTAGGGTCTGGAACCTTGTGTCCTTTAAAACAAACCCCAGATACCTTACCTCCTCCTTGCAGATCTGGGCCTTCTTCTTCGACACCTGGTAACCTGCTTCCATCAGCAGCTGGAGCAGTGCTTTTGTTCCTTTCTAGCATTTTCCCTTGGTCTCTGCAGCCAGCAGCAGGTCACCCCCGTATTGTAGGAGCCAACATCCATACTCTTCCGGATGGAATGAGTTCAGGTCAGAAGCAAGGCTTCCCCAAAGATGGTTGGGGAGTTCTTAAACCCTTGTGGGGGAGTCCAGATGAACTGTTGTTTGGTGCCCCCGACTTGATCTTCCCATTCAAAGGCAAAGATGGGCTGTGACGCTGGGGCGAGGCGTATGCAGAAGAAGGCATCCTTGAGATCTAGGCAAGTATAAACTTTAGGCCTCTGCGGGAGGAGGCTAAGTAAGGTATAGGGGTTTGTAACAGTGGGGTGTAAAGTCACAGTAGCTTGGTTGACTAGCCTGAGATCCTGTACAGGCCTATAGTCTTGTCCTGCTTCCTTTTTGACCGGCAGGATCAGCATATTCCAAGCCAACTGGCACTCTACTAGAATGCCCGCTTGTTTCAATCTATTGATGTAGGGCAGTATGCTGGCCAGACCTCTATCGGTAGTGGGTACTGGCGCTTTCTAAGGGGGATGGTGCCTGCTTTGAGTTCTATTATCACTGGGGCTTGATGTTTAGCCAGCCTGGGGGGAGGGGGGTTTGTCTTCTGCCCAGACCTCAGGGAATAATTGAGTTAGCTCTCTCTCACGCTCTTCTGGCCCAGCCGGTTCTTCCTTTGGAGGCTCATGCAACCTCCACTCATCTTGGGGTGGTATTGAGAAAGACAGCAAATAAGTCATAGTGTCCATCCGGAAGGTGAGCCTCTCCTCAGGGGAGAAAGTCACTTGTGCTCCTAGTTTGGAGAACAAGTATCTTCCCAACAGGGGTACTGGGCACTCAGGAATGTAGAGGAATTCATGAATCACTTGGTGCCCCCCATCTGACATTTTCTGGGCTGGCAAAATGATTTAATCACCACTTCTCCCGATAGCCCAGTTACAGTGGTAGTCTTTTTGGACAGTGGTGCCACAGGTTTTGTTACTACTAACAGTTCTGCTCTTGTATCCACCATGAAGTCAATGTTTTGGTCCCCCAGTTTTAAGGTTACCATGGGCTCTCGGGGACCTGATATCTCAGCCCCAGCAGCCCTATTTAATTTCCAAGTCAGCAAGCCCCACAACTGCGGGAGCTTCCTCTTCCTTCCTTGCCTTAGGGCATTCATTCTTCCAGTGGCCAAAAGCTTGGCACCAGGCACACTGGTTTGGCTGTAACGGGGTCCAGGGCCTCCGTTGGGACCGGTTGAAAGGACTGTCCTGTCCCTGGGGCAGATGAGGTTTTCTGGAGGGCCCGAGATAGACTTTCCT TCONS_00205983 TCONS_00205984 TCONS_00205985 TCONS_00205986 . 5' 3551 TCONS_00205983 TCONS_00205984 TCONS_00205985 TCONS_00205986 . 5' 3551 EMBV3_01130 GAGGGCCAACCCAGTCTGGAAGCACCTCTTATTAATGTTACAAGGAAACCGCTACCTCAG Gene BVV0102_401221 + 0 NULL GK000018.2:44866474-44917049 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083338 TCONS_00083340 TCONS_00083337 TCONS_00083339 1 XLOC_051233 Coding TCONS_00083338 XLOC_051233 Coding Coding KIAA0355 18:44883914-44971360 j TSS62648 6104 1 TCONS_00083338_5 774 0.00982961992136304 14 0.930356223912173 0.00620294222100924 0.00481080760722831 0.00238168613487695 0.00180071812403682 0.00248858486143876 0.00154723604542998 0.0029603265358486 0.0050924943783029 0.00677428796405727 6.54512446198455e-09 0.000103569991835563 7.39238388081617e-05 0.00105580887757502 0.00278203187964848 0.00146339543225067 0.00241245111454846 1.97404260361034e-16 0.00319761911604087 0.00420902074851882 0.00334577185561106 0.00260775748042779 0.000893641247691386 0.000219662039552718 0.000202223328450701 0.00520667424402699 0.00382252008281464 0.00409902082340789 9.970723036822e-05 0.000336798877535004 0.000350362296435124 XM_005219027.1 KIAA0355 PREDICTED: Bos taurus KIAA0355 ortholog (KIAA0355), transcript 0.0 8902 99.98 0.808977719528178 NM_014686.3 KIAA0355 Homo sapiens KIAA0355 (KIAA0355), mRNA. 0.0 5003 87.06 0.669233289646134 TCONS_00083338_5 sp|O15063|K0355_HUMAN K0355_HUMAN Uncharacterized protein KIAA0355; 0.0 1331 94.44 0.998708010335917 0 coding 1 1 0 0 0.0489688327862053 0.783549247986861 -0.00577084144405166 0.900504328507707 GGGGCCGGCCCGGAGACGTCACTTCCGGTGTACACAGCCGGTCCGGGCGGTGCGCAGGGGGCCGGGGCGCGTCGCAGGAAATGACTTAGAAGCCTTACAAGTACATCTGTGCATTCTTGCTTCAGACTTTACAATTGAGGGCCAACCCAGTCTGGAAGCACCTCTTATTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAAAGAAGAAGACTTATAATAACAAATGCCTTTTTTTTGAAGGAAAAAAAACTTGTTTTCAGAAAATATTAAAGGAAATTTGGAAATTTTTCGCATTTAGAAGAAGCTTTACAGGTAAATGGATTTGGCAGGCAGGCTCTGTCAAAATTCTGCAGATTTGATCTTCCTTCCTAAGGACTTAGTGTAAAGTGATTCTGTACTGCTTTTTAAATTGCTGTTGATCAGCTTGTGGGTTTTTGGGTTCTCACTTTTCTGGTATATTGAAGATACATTATATTACATTTTTTAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAAATATTCTTGCAAAGCAGTTCTCAGTAAACATTTTTCTCAGCAACCATATCTTTTTATTAAGAGGGTAGAATGCTAACAGTTCTTATATAGCATTTTGGACACACTTATTTTTTGTCAGAGGTCCTGCTTCCACTGAAAATATTAACTATATAAACTTCTTGTCCTTTTCACGTCGACATTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTAGATTTGCAGAACTCCACTATTTTTATACCTAGCCACGGTTTTAGGAAGAAAGAAAAAGGAATTGGAACCCTGACCCTCTCCCGGTCACTGGGACAGTCCCCTTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCAATGCCCGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCTACGGCCACCACCACCCCCCTGGGCAGTCTGACCGCTGCAGGCAGCTGCCACCACGCCATGCCCCACTCCACTCCCATTGCCGACATCCAGCAGGGCATCTCCAAGCATTACAGAAGGTGCAGCCCGTGGCTCACTCGTGCTTTGCTGAAGTTGTTGTGCCAGAAAAAAAGAACAGCAGCAGTGGCGGCGGCTTATCTGGCGCAGGCCACACGTCGGAACTGGAGGAGGCCGTGCGGTCCTGGCGCGGGGCTGCTGAGGCAACATCTAGACTGAGAGAAAGAGGCTGTGATGGCCGCCTGGCAGGAATTGAAGTTCAGCAGCTCTTCTGTTCTCAAAGTGCAGCAATTCCCGAGCACCAGCTGAAAGAACTGAACATAAAAATTGACAGTGCTCTGCAAGCATATAAAATAGCTCTGGAAAGTTTAGGTCACTGTGAATACGCAATGAAAGCTGGTTTCCACCTGAATCCAAAGGCGATAGAAGCCAGTTTGCAGGGCTGCTGCAGCGAGGCAGAGGCGCAGCAGACGGGGCGGAGGCAGACCCCGCCGCAGCCCATGCAGTGTGAGCTCCCCACTGTGCCCGTGCAGATAGGATCAAGCTTCCTGAAGGGGGTCTCCTTCAACGAGTCAGCCGCCGACAACCTGAAACTCAAGACGCATACGATGTTACAGCTAATCAAGGAGGCAGGCTGCTATAATGGAATGACACCCAGGGACGACTTTCCTGTGACTGAAGTCCTGAACCAGGTGTGCCCATCCACGTGGCGGGGTGCCTGCAAGACTGCCGTGCAGCTGCTGTTTGGCCAAGCTGGACTGGTGGTAGTTGACACAGCACAGATTGAAAATAAAGAAGCCTATGCCCCCCAAATCAGTTTAGAAGGCTCCAGAATTGTGGTTCAAGTCCCATCCACATGGTGCCTGAAAGAAGACCCGGCTACCATGTCCCTGCTGCAGAGAAGCCTAGATCCCGAGAAGACGCTGGGCCTGGTGGACGTGCTCTACACTGCGGTGCTGGACCTCACCCGCTGGAGGGCAGGGAGGGAACAAGCTTTACCCTGCATACAGATCCAGCTTCAGAGGGAGATCTGTGATTTTGGAAATCAGGCTGACTTGCCTTCTGGGAATGGGAACAAGTCTTCAGGTGGCCTGCAAAAGACATTCTCCAAGCTGACCTCCCGGTTCACCAAGAAAGCTTCGTGTCCCAGCTCGAGCAGCAACACGAGTTATTCCATTCCAAATACCCCTTCCAAAAACATCTTCATAGCCGGGTGTTCAGAAGAGAAGGCCAAAATGCCCACTAATATGGATTCAAGGCTACAAAGCATTTTGAACATTGGCAATTTCCCTAGGACTGCAGACCCTTCACAGTCAGCTCAGAATTCCAGTAATCACATGGCCAATGGTTTTCTCCTGGAGAGGCGTGACAACTTCCTGCAAGGGGATGATGGCAAGGACGAGAAGGGTATGAATTTGCCAACCGATCAGGAAATGCAGGAGGTGATCGATTTTCTCTCGGGCTTTAACATGGGCCAGTCACACCAGGGCTCCCCGCTGGTGACACGGCGTAACTCTGCTGCCACAGCCATGGTGACTGAGCAGAAGGCAGGAGCCATGCAGCCACAGCAGCCGTCACTGCCAGTGCCCCCACCGTCGCGGCCACCCCAGGCTGGGGCGCACACACCTCTGACACCCCAGCCGGGCCTGGCACCTCAGCAGCAGTCCCCAAAGCAACAGCAGCCCCAGGTCCAGTACTACCAACACCTGCTGCAACCTGTCGGACCGCAGCAGCCCCCGCCCCAGCCCCGGGCCCCTGGGAAATGGGTACCCGGCTCATCCCAGCAGCCAGCGCAACCTGTCGGAGCTGGTCTGTCTCCCCTTGGCCAGTGGCCTGGCATATCTGATCTCAGTTCTGACTTGTACAGCTTGGGTCTGGTGAGCAGCTGTTTGGATGATGTGATGTCGGAGGTTTTGGGACAAAAGGCACAGGGACCTAGAAATAACACCTGGCCAAACCGTGACCAAAGTGATGGAGTCTTTGGGATGTTGGGAGAGATTCTGCCTTTTGATCCTGCAGTGGGTTCAGATCCCGAGTTTGCACGCTATGTGGCAGGAGTGAGCCAAGCAATGCAGCAGAAAAGGCAAGTCCAACATGGTCGCCGCCCAGGCAACCCCCGAGGCCACTGGCCACCCATGGATGATGCCCATCGGACCTGGCCTTTCCCAGAGTTCTTTGCAGAAGGGGATGGCCTGCACAGCGGCTGGGCGGGGGCTCAGGGAGACTCAGCCAGCTCAAGTGATGAGACATCCTCTGCCAACGGGGACAGCTTGTTCTCCATGTTTTCAGGGCCTGACCTTGTTGCTGCTGTCAAGCAGAGAAGGAAGCACAGCAGTGGTGAGCAGGAGACCAGCGCGCTGCCCTCGCCGCCTCTTCTCACCGCAGTGGAGGACGTGAACCAGGATAACAAAACCAAAACGTGGCCGCCCAAAGCCCCCTGGCAGCACCCTTCCCCGCTGCCCAGCACCCTGCCTGGCCCAAGCGCACCACTCTATGCAGTCGCCAGCCCCGGCAGCCAGTGGAGCGACACCATGCAGATGCTGCAGTCCCCGGTGTGGGCTGCCACCAGTGACTGCAGTGCCGCCGCCTCCTTCGCCTACGTGCAGACCCCGCCGCAGCCCCCGCCCCCACCAGCACACAAGGCAGCCCCCAAGGGCTTCAAGGCCTTCCCTGGGAAGGCTGAGCGCAGACCAGCCTACTTGCCCCAGTACTGACCCCAGGCCCGCCTGCCCACCCGCCCAGAGCTTTTGGGGCCAGGGGCCCCAGCCCAGGGCTGACTGGCTGGCAACAGCCCCCCAGAGGACCAGTGCACCCCTGTCCCAGGCAGGGATCCCTGGGGATGGAGGTGGTTGGCAGCTCCAAGCCTTTAAGGCCTGGCTTCTCAAAACTCTGGAGGCATCAGACACCTGGAGGGCCAGATGAAGATAGCGTTTTCTGACTCTCCTCAGGGAGATGCTGGGGGATGTTCGAGTTTAATAAGCACCTCTGGTGATTCTGATGTAGGTGGGCCACTGGCCACACTTTGAGAAACACAGCTCTCAAGTTTGTAGACCCCACTGCGTGTGTTGGGAAGGCGTTGGGGCTGAAGGCTGAGAGCAAAACTGACCATTCTTCTGAAACCTTCTCTTTCCCTCCTTAACACGTTGAGTGATGACCACACCAATCACTGTATTTTATAGCTATTTTTCATATAGGTTTTTAGTTAAAAGTATCTCCTGCCTCAAATGCATTGAATATTTTAAGATAACAAATAGAGTGGCTGGAGGTTTTTCAACACTATATTTAAGCTTCTATGAACTGGGCAAAGGATAGCATATTTGTGATGAGAAGCAATCACCTGGGTTTTCTGTAGATGGACAGCCCCTCGCCACCCCCAGCAGCACCCAAGGGGTGTGACCTTTACCGGATTTACAAAAGCAGGATCATAGCCCTGATGGTGCGTGGAGATGAGCCTGCTGGCTGCTGTCCGTGTGCGGGATAAAGCTACACCTTCTGCCCTCATATCTTTCCACTCACGGCCAGAGGCTTCAATAAGGTTTCCGAGCGTGGGGTTGTGGTCAGGGGGGCTGCAAAGAGACACTTGAAATTGCAGTAACATTGTGAGCTGGCTCAAGACAAACCAATTAAGATGTAGATAGGAATTAATTTAAAAGTTTTTCTTTAAAGAAAAAAATAAACCACCTCATTTTCAGTTAACATGTGCTGTTAAATAGATAACATCCTGTGGATTTAGGGATATTTTTCCAGCCAGAATGGATCCAGAAGAATTGAATGGTGCTTAAATTGAGAAATAATAAATATATCTATATAGACTAGACCTATCCCACTGTATATTAATTGAGGTTACAGAAGTTCTTTATATAAAACTTATTTAAATTTTTCATATTTCATCTTTGAAAAAATCTAATTGAGAAAAATCCATAATATTTTCTGGTATGAAAGTTTGACAGTATTAATATTTTTTTTTATATTTTCTTAAATCATTAAACCATTTTAATATATGTTAACTACTAATAAATGGTTTATTCTTTCTAACTCCATATAAGCTTTTCCAGCAGAGATTGTAATAACACAGTTATGTTCTCATTTTTCTATGAATATAAGTAAATTTATATTTAAAAATACCAAAAAGAATATATATATATATATATGTATGTAGACACACTAATTATAGAGGACCCTTAGGGTGTCTGAGCCCAGCCATCTGAACCTTTAGTACTGTGGTGCCAGGCTGTCTCCAGGCCTCGGGTGTTGTCTTTTGTGCTGAGTGGGGATGTCAGTGCTGCCTGTAGTCATGATCCTCTCACCGTGGGTTCTGAACATTCACCTCACCATGTTTACAGAGAACTGTTTTGTACATAGACTTTTCAGGCACGTGCTCTGCACCGACCCTGGTGGCTCTTGTCCGTGTTGGCTGTCACTGTGTGTGCACTACATCTGTTGTTATCTGTGGCTGTTTCCTTGTAAGATAGTTTTCTTCTCTCCTTCAGTGATGTGTCTCCAGTACCCCGTGTTTCGAGTTCTATTATACTGAAGTACCCTTGTTTTAATAGTGCCTCCCCAAAGACCTCACTCTGGACAGAGGTCAGTCCTTTATGCTCCAGCGCAGGTGACATCAACATTGCTAACTGTCACTTTCCAGTCTGTTTTTCTCGATTAAGGAAGGCATTTTGTAATTGCGTCTCCATGGGCTGTGAGACTGTGTGAAGCTGTTTGTGTAGTCTCCTTGTGGGTGCTGTGTTCTCAGCACCGCCTTGCTTTGAACACTGGTAATTCCAGGTGCTGCGCTTGGCAGAGGGGTCTCGCCAAACGCATGTGTGTGCGTGTGTGAGTATGTGTGTCCTTTGTGTGGCCAGGCGTGGCTGCCTTGCTCGTGTGACTAGTTACAACGCTTCCAAACTGGAACTCTACATTTTGTATCTTACTTTTAAAGCTCCTATAAGTAAAATAACTATTGGCTTTATTAAAATATACCTTTAATAATTTTTGGATCTCTGTCTAAAATGAACTGCAGCAGATGATCATGTCAGAAGCCCTG EMBV3_27160 GTTGCCAAAAACCTTTCTTTCCAGAGGCCACATCACCCTTAGATGAGCACCCTTGGTCTG Gene BVT0101_050991 + 0 NULL GK000022.2:30044549-30055399 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126582 1 XLOC_077470 Coding TCONS_00126582 XLOC_077470 NonCoding Coding PROK2 22:30018266-30051831 o TSS94893 468 0.448717948717949 3 0.986145870575617 0 0 0.000433037114836098 0.000177439468638171 0.000133242903405107 0 0 3.93931895777165e-05 1.68060574303478e-150 0 0 0 0 2.24522345091038e-126 0 0.000733652473677761 0 0 8.20741850871479e-320 0.000157663858503849 0 0 0 0 0.000145541176825938 0.000107330661217253 2.26240396415533e-212 0 0 0 NM_001134649.2 EIF4E3 Homo sapiens eukaryotic translation initiation factor 4E family member 3 (EIF4E3), transcript variant 3, mRNA. 5e-51 205 89.68 0.329059829059829 0 noncoding 0 0 0 0 -0.328425019503528 0.110764358075244 -0.0129513264800654 0.785991948768879 CCTCTTTGTGGAATGTGGAGCTCAGCAAGGGGCTGTGGGGTCACCTTCTCTTCCTTCCTCCTGCCACCCCAAGCCATCTGAGTGGCGTGCTACGCAGTGGGAGAGCACGTTGGCCTGGACCTCACGCTACCCACGTTCTAGTCCTGCCTCTGTCATTTCCTAGAGCTGTGGCCTCGGGGTTTCTCAGCATGGACTCTTGACAGTTTGGACCTGATCGTGCTTCGTTGCGGGGGCTGTCCTGTCCACCATGGGAGAGTCCAGAGCAGTCCTGGCTCTTACCCACCCAGGGCCAGTAGCACCCTCCCCGTTGTAAAAGCCAGAAATGTCTCTGGATGTTGCCAAAAACCTTTCTTTCCAGAGGCCACATCACCCTTAGATGAGCACCCTTGGTCTGCAGAGAGGGGTTTGGGTTAGGGTTCTGTTGAGAGGTTTGGGGTTTTTGTAACATGAATAAAGTAAAAAAATTTG TCONS_00126586 s 5' 0 TCONS_00126583 TCONS_00126584 s 5' 1551 EMBV3_15582 TACCACGTCCACGAGTGTGTTTAATGTCGTCCAAGTCGATGAGGCAAGACGGAGGCTATG Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_31917 TCCCTCAAGAGCCATATCAAGAGGGGCTTCAAGGAGGGATTCAGCTGCAAGGTGTACTAC Gene GeneID:539685|C3H1orf111:NM_001046460:332_cdna Constitutive 0 NULL GeneID:539685 3 GENE C3H1orf111 C1orf111 MGC134538 chromosome 1 open reading frame 111 ortholog EMBV3_31966 GCCGACCCGGACCTCAACAACCCTTTCAAGCCTCCACCAGGTAATGTGAAAATGCCTAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04620 TTTTTCTCTTTCAATTTCATCCAAATGTGGATGTGCCTTCAAGTAGATATCAACAGCTCG Spike ESK0802 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22765 AACCTCTTCTCTACGTGGTCATCATGGCACAGAAAGTGTGTTGGGCGCTGGTACTTACTC Gene GeneID:513114|LOC513114:XM_002693661:271_cdna Constitutive 0 NULL GeneID:513114 15 GENE LOC513114 NULL similar to Olfactory receptor 8K1 (Olfactory receptor OR11-182) EMBV3_09511 CAGATTCAGAGGACTGAAGTGAGCACCAACCATGTCCTGATTTACTTTGAAGAGCTGACC Gene GeneID:506828|LOC506828:XM_002687845:203_cdna Constitutive 0 NULL GeneID:506828 5 GENE LOC506828 NULL similar to Alpha-2-macroglobulin precursor (Pregnancy zone protein) (Alpha-2-M) EMBV3_19686 GAGGACACCGAGAAGGAGGCCTTGGCCAGAGAAGAACGTGCAAGGGGCACAGAATTATTT Gene GeneID:513929|FKBPL:NM_001101982:108_cdna Constitutive 0 NULL GeneID:513929 23 GENE FKBPL MGC157094 FK506 binding protein like EMBV3_17889 CACAGTTGCACCATCTGTACTTGTCTCCTGTCAAAAATGTTTCCTGGTGTATCACTGCAG Gene GeneID:510833|COL3A1:NM_001076831:21_cdna Constitutive 0 NULL GeneID:510833 2 GENE COL3A1 MGC139882 collagen, type III, alpha 1 EMBV3_13452 TTCCTGTTCCTGCCGAAGGTGTCCGCAACATCAAGAGCATGTGGGAGAAAGGCAATGTGT Gene GeneID:281660|CALD1:NM_174258:2_cdna Constitutive 0 NULL GeneID:281660 4 GENE CALD1 NULL caldesmon 1 EMBV3_12737 TGGTTATCGACATAACATCACCTCCGTGTCTCAGTGCTGTACCATCAGCAGCCTGAGGAA Gene GeneID:617578|GPHA2:XM_002699336:196_cdna Constitutive 0 NULL GeneID:617578 29 GENE GPHA2 NULL glycoprotein hormone alpha 2 EMBV3_21273 AGCTGTGAAACTGACGAGTCTGGCCTGTGGAAACCAGCACGTCTGGGCCTGTGACTCCAG Gene GeneID:530121|TECPR2:XM_002696777:472_cdna Constitutive 0 NULL GeneID:530121 21 GENE TECPR2 NULL tectonin beta-propeller repeat containing 2 EMBV3_05090 AGAGGTGCCCAAATAACCTGCAGAATGTACACTGCACACTGACAAGGTTCACACCCACAG Gene BVT0102_195062 + 0 NULL GK000013.2:65212124-65214395 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18056 GCCTTGGCAGTTATTTTTCCATCAACATGAGAGAAAAGCAAAACTACCCCTCCTACTAAA Gene GeneID:532896|IRX5:XM_002694782:589_cdna Constitutive 0 NULL GeneID:532896 18 GENE IRX5 NULL iroquois homeobox 5 EMBV3_08680 CAATTATGCGTGGCAATGTATGTGTTGGCTTTGTGGCTGCTGCATGGGGAACTGGCTTCC Gene GeneID:785647|LOC785647:XM_002690708:356_cdna Constitutive 0 NULL GeneID:785647 10 GENE LOC785647 NULL similar to Olfactory receptor 4F4 (Olfactory receptor OR19-3) (HS14a-1-A) EMBV3_01113 TTTGAAACCTCAGTTTGCTCTTTGGAAAAGGAGCCTTTGGTTATGCAGTACGCAGAGCCG Gene GeneID:531964|SEC31A:XM_002688389:48_cdna Constitutive 0 NULL GeneID:531964 6 GENE SEC31A NULL SEC31 homolog A (S. cerevisiae) EMBV3_32515 TCGGGAACGGTCATCTAAATCCAAGAACGGGGTAGAGAACCTGGAGGGCGGTTCTCATAA Gene GeneID:539884|RFX5:XM_002686042:242_cdna UTR3_Alt 2 NULL GeneID:539884 3 GENE RFX5 NULL regulatory factor X, 5 (influences HLA class II expression) EMBV3_11839 ACTGGTGGCTTTGATCAGTCACTTGGGTTTGGGATCATCCTCACTCTCTTGGGCAGCTTT Gene BVT0101_042403 + 0 NULL GK000015.2:75044755-75047568 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060038 TCONS_00060039 TCONS_00060041 TCONS_00060037 TCONS_00060042 1 XLOC_036565 Coding TCONS_00060037 XLOC_036565 Coding Coding ACCSL 15:75025546-75046295 j TSS44935 3504 1 TCONS_00060037_4 611 0.137557077625571 15 0.831839213418161 0.217891301764353 0.162894727891493 0.179763452992949 0.123032249278219 0.151316790322563 0.0643074728989984 0.0811620139689315 0.0985033058778912 0.1037166308726 0.00275027273256939 0.00117934259432333 0.000713906661124064 0.007679482926335 0.0101028753397793 0.00791946610729903 0.000211922854801416 0.000153169837785846 2.99821338542766e-26 0.0731897470990789 0.0584157211666242 0.0351151123421063 0.000118842904907962 3.03460758814165e-07 1.30019245764283e-06 0.114513183075141 0.083954453377462 0.0631425442024807 0.000345419464820695 0.00013401754714288 0.000501335088865605 XM_601090.6 ACCSL PREDICTED: Bos taurus 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like (ACCSL), mRNA. 0.0 3745 100.00 0.592180365296804 NM_001031854.2 ACCSL Homo sapiens 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like (ACCSL), mRNA. 0.0 1471 78.37 0.510844748858447 TCONS_00060037_4 sp|Q4AC99|1A1L2_HUMAN 1A1L2_HUMAN Probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2; 0.0 775 66.73 0.927986906710311 1 coding 0 0 0 0 0.146857801327174 0.604246589694903 -2.544933509998 7.21740456373401e-05 GAAACCATCTGCATGCTTAAAAGGAGAGCGCGCAGGCCCAAAGCAGGAAGCAGGCTTACTGAGAGGAGCACGCGGTGGAGAGGTCTCTGAGGCCCCCAACGATTAAAGGACTTTGACCAGAGCAGAAATGAGTGGAAACAAGGAGAGGGGTTCCAGGCAGCCTGCTGAGGCCAGTGGGAACACCCAGACTACAAGTGGCCCATCAGACACCCCCCACACGCCCTGTGTCCAGATGAGGGACCAGGCCCTCAGATACCGCAGCATCCACACCCAGCTGATGGAGATGGTGCTGACCTTGCAACAGACTGTGGAGGATCACATCATGCAGCTGACGACCAGACCTCAGCAGCGGGACCTGGCGCTGGAGGAGCAGTGGCACGGTCAGGCCATCAGGGAGCAGGAGGCGCTCCTGGGTCGCCTATTGTTCCAGATCGTCAGCTTCCTGCCGGCTGGGGCCCCAGGCGACCAGAGCGTCCAACCGCCTTGCACGTCCACGGACTCCAGGGGTGATGTTGGTGGTGGGCAGCCGGTCCAAGCAAACAGGCAGACTGGCCAGATGTTCTACCAAGAGAGTGATTTTGAAAATACAGTTATCAGCTATGACCTGTCCAACCGTGGGATTGATATCTCTGCCTTATACCACTTGAGCTTCCGGGACTATGACACCTACCAAGGAAACAAATACCACAAGGACAAGAACACCTTGGGCTACATCAACCTTGGTACCAGTGAGAACAAGCTCTGTACTGATCTTCTGGCTGAGAGGTTGAGTCAGAGTGACATGACCTACGTTGATGAAGATCTACTGCAGTACACTGATTGGAGAGGGCAACCATTCCTGCGGAAAGAAGTGGCCCGGTTCCTGACCTTCTACTGTAAGACACCTAAGCCCCTTGACCCAGAAAATGTGGTCATTCTAAATGGCTGCTCCGCTGTCTTCTCTGCTCTGGCCATGGTTCTGTGTGATCCAGGTGAGGCCTTTCTAGTCCCCACCCCCGCCTATGGGGGCTTCGCCTTTAGTACCCACCTGTATGCGAAAGTCAAGCTGGTTCCTGTCCACCTGGAGAGTCAGGTCACTGAGGCAAACGGCTACCCCTTCCAGCTCACTGTGGATAAGCTGGAGCACACCCTGCTCAGGGCTAAGATTGAGGGGAAAAAGGTCAGAGGTCTTGTGCTAATCAACCCTCAGAATCCTCTGGGAGATGTCTACTCCCAAGACTCCATGATGGAATATCTGGAATTTGCCAAGAAGTACAACCTCCACGTGATTGTAGATGAGATGTACATGCTGTCTGTGTTTGATGAAGCCATCACATTCCACAGTGTTCTGAGCATGAAGAGTTTGCCTGATCCCAACAAGACCCACGTGATCTGGGGCGCCAGTAAGGATTTCTGCATCTCTGGCTTCCGCTTTGGCGCTCTGTATACCCACAACAGGGAGGTGGCCTCTGCCATGAGCTGCTTTGGCTACCTCCATAGCATCTCTGGCATCGCCCAGTACAAGCTGCGTCAGCTGCTTCAGGACAGAGAATGGATTGACAATATATACCTGCCCAGTTATCACTTCCGGCTGCAGGAGGCTCACAGGTATGTCACTCGCAAGCTAAAGGCATCGAAGGTCCCTTTTCTCAATCGTGGCTCCGGCCTCTATGTCTGGATCAACTTGAAACAGTACCTGGACCCGTGCACGTTTGAGGAAGAGCTGCTCCTCCATCGCCGCTTCCTGGACCACAAGCTGATCTTGTCCCCGGGCAAGACCTTCATGTGTAAGGAGCCTGGCTGGTTCCGCCTCGTCTTTGCAGCCAGGCCCCACCTGCTGAGAAACGCCATGCGTCGGTTCCAGCAGGTGCTCGTGGAGCAGGCGCAGGAGCGTACAGTGAAGCAACTGGAGGATGCAATGAAGGAGGAAGTGTCTACCCCCCAGCCAGAGGCTCCAGCCAGTCCCGCTCTCAGGAAGTCCTGATGTCAGCCTTGGATCTGGAAGGCTGGGCGCTCGCCTGGAGCCGTGACCAAACAGTGGGCTCCTCCAGGCATGAGTGCGTTTGACCCCACCATCAGCCCCCTTACGCGTCTGTCATTTTGGAAGCTTTACATCTTCTTAGTCTCTACGAGCCATTGCGTGTGTGCAAAATGTTTTTATGGGAATTCTGGTGGGGAAGCCTAGAGGAGGAATAAAAGGAGCTCTCTGGGTCCCTGTTTAGGTGGGTTAACTTTTATATTCTGTATCTAATAAATTCCATATTCTTTAAATTGCAGGCCTGTTTTATTTCACATTCTTCATATGACCTTTTGGGAGCTAGAGGATTTTTAAACTTAATTTTCAATTAAATTTAAATTAAATATTAAAGCAGGTAAAGCAGGTTATATGTGAAGAATACTTTCTAGGGCAGGCCAGAAAGGAAGGGAAATCATGATCCCCAATTGGCAGAGCATTTTCTAGGTACTGGATGCAGTGTCCCATAGGATCCTTACACGATCACACTCACCTTACACACGTGTGGCTACGTGGTAGAGTGAGAGTATAGTTTCAAATGTTTCTGCTTCCAAATATGAGTTCTCTCCATTGTTGCCTTTTTTAAAGGCTTTTAAAATGAGTCTCTGGTGATCAGCCTGAATGAAGTCTTCCGTTTTCATCTCTTCAACTGTTCAAATCATACCTCCTGAGCATTTCTCTGCAAAACCTTTGCACATCTGAGCTTTGGTCTGAGCATCGAAGCGGTGAAATGGGCAGAGCGGGGACTACCACCATTTTATAGATGTTGCAAGAACTATTAGCAGCCACTGATGGCTTTGATCAGTCACTTGGGTTTGGGATCATCCTCACTCTCTTGGGCAGCTTTGCGGCCCACCAACAAATCCTGATTCTTCAAGACTTTTTGACACCAGGCAAGTTTGTTTAGAAATAAACTTGATTAGTAGACATAGAAAGAGAATTCACTGGTTGCATGAATGAGTTCATGTGACCAGAAGAGATGACTTTCCTTCTCCTCAATATTTATGTCTCTTATTTTTCCGTTCTAATTTCATGGCCTAGAACCTCAAGTACAGAGTTGAATAAAAAAGTAAGAACATTCTTGCCTTGTTCTCAATCTTAACAGGATTAAGTTCGGTCTCTCATTCATAAGTATAATGTTACTAGAAATATTTTTCATACTGCCTTTACCAGATAGAAGAATTTCCTTCAATTCCTAGTTTGCTGAAAGTTTTACCATAAATGTGTGTTCAGTTTTTACCAGATGTTTTTGCCTGTACCTTTAGAGATAATATAATTCTTTTAGTTATTAATGTGATGAAATTATATTGATTAAAACATGTTACAGCAACATTATAGCCCTGCAATGGCCCCATAGAGTCATGATACATCACCTTTTTATACATCGTTGGATTTGGCTTTGATGTTAAAATTTTTACATCTATTTTCATGAAGGATATTGTGTTATAATTTTCTTTCCTGGTATTGAAATGAATTTTTTGATCAGTTAATTTAAATGTTTATCAATTGTA EMBV3_26908 CACAATGAGGACCAGGCTTGCTGTGAAGTGGTGTATGTGGAAGGCCGGAGGAGTGTTTCA Gene BVV0102_054094 + 0 NULL GK000003.2:30755269-30769965 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169416 TCONS_00169417 TCONS_00169415 1 XLOC_103357 Coding TCONS_00169415 XLOC_103357 Coding Coding LOC100848925 3:30759267-30763686 j TSS126853 1339 1 TCONS_00169415_2 375 4 0.697827071072884 0 7.50392948637215e-06 0 0 0 0 0 0 5.89219465159634e-06 9.81212482864925e-05 0.000153866113533653 4.53969446422493e-05 0.000249856239562221 0.000573953856386905 0.000207475575966449 0.00104528380064797 7.31053414459787e-11 0.00125436022656905 0 0 1.67564788154606e-05 0.000329665535810184 0.000214647519680975 7.51215560321867e-05 0 4.79121848075612e-27 0 2.33383581858794e-05 4.29844072356659e-05 0.000554849037487854 XM_005197771.1 PPM1J PREDICTED: Bos taurus protein phosphatase, Mg2+/Mn2+ dependent, 1J (PPM1J), transcript variant X3, mRNA. 0.0 820 99.57 0.343539955190441 NM_005167.5 PPM1J Homo sapiens protein phosphatase, Mg2+/Mn2+ dependent, 1J (PPM1J), 0.0 643 90.41 0.349514563106796 TCONS_00169415_2 sp|Q5JR12|PPM1J_HUMAN PPM1J_HUMAN Protein phosphatase 1J; 1e-70 233 92.47 0.386666666666667 0 coding 0 0 0 0 0.146122647739107 0.20843258639259 0.0519454892706334 0.398284459534266 ATGCCAGGAATAGCTGGTGAGAGATTCAGGGAGAGGAGATCCTTAGGATTTGGGTATGGTCAGAAGGCTGTTCTGGAGCCCAAGGAAACTGTTGACATCCCTGTTGACCATCTGGTGCTGAAACACCCCAGCAACAGTTCGCTCGCCCTCATTCTCACTCTGGCAGCCCCAGCCAGAGGTGTTATCACACCAGAGCTTCACACCCAGCGGTCCCTGATGGAAGTCATCAGCTCCATCACGCTCTGGGCAGGCTGGCCACAACGAACTGAGCAGACCCTTCTTCCCCTAAAAAACGGAGGCGGGAGAAGCCGGACGGGGTGGGGAGAGGCCACTAGCCCGCAGGGCCGGTCCGGGAGCCGGGAAGATTTGCCCGGGACCCGCCTGGAGGCGGGGAACCAATGGAGGGACCGAACCGGTCGGAGCGAGCACCGCCCCTCGCGAGCCCTAGGGGGCGGGGCCTGCTCTGGGGCGGGGCCACGGCCGAGGGCGGGGCAGGGAGGCAGCAAGCTAAACCGGGTGCGCTCGGCCGTGGCGCACCTGGTGAGCTCTGGGGGCGCCCCGCCTTCGCGCCCCAAGTCGCCAGATCTGCCCAACGCGACCTCGGCGCCACCCGCTGCCCCTCCACAAGCTCCTAGGAGCCCTCCGGCCAGGGCTGGGAGCGGGGGTGCGGCTCCAGCGAGGACAGTAGAGGCTCGAGCAAGCTTCTCCCGACCGACTTTTCTGCAGCTGAGCCCCGGGGGTCTGCGACGCGCCGACGACCACGCTGGCCGGGCTGTGCAAAGCCCTCCGGACACCGGCCGTCGCCTGCCTTGGAGCACGGGCTACGCCGAGGTCATCAACGCTGGCAAGAGCCGGCACAATGAGGACCAGGCTTGCTGTGAAGTGGTGTATGTGGAAGGCCGGAGGAGTGTTTCAGGGGCACCTAGGGAGCCTAGCCGAGGCCAGGTAAGCCCCCCAACCCCCTTCTTAGCCTCCAGAGACACGGGAGACACCTCTCCCCAGGGATTCCAGGCATTTAGTTTTCATCTGAGCCACGCAATACATCCTAAATCACTAGCTTTCTGCCTTATGGCACAGAACCTTTATCTGGCATTGCTCAGATTCTACCATGTCAGTATGAATATTTAGTTTTCCACTTAAAATGTAGATGCTTATGTGTTTATTGATGATTTAAATAATTACCATTGCTTATGTTTGCATCTTTATCCTTTGAGTTTGACTCTTTTGATGCTTTGCTTTTAGACACATTGTAGGCCCTTGGTGAATGAATGAATAAATCTAATTTGCCTTTAATACCAAACTCTGACTTCCTCTCTGATGTTTATATGGATGCCCAGAG EMBV3_12580 TCCAGAAGGCATTGAGCCCCTGGTGTACCTCTGCCAGACGGACACAGAAGCCGTGAGGGA Gene GeneID:619120|LOC619120:XM_002694821:697_cdna Constitutive 0 NULL GeneID:619120 18 GENE LOC619120 NULL similar to Protein FAM65A EMBV3_07605 GCTGAGATCCGGGCCCACGCCACGGCCAAGAGCGTTGAGGGCGAGCAGCATGAGAAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39923 GGCACTTGGCATAAAGCAGCCTCCCTCAAGAGTAACTACAACCTCCTCATGCACAAGATG Gene GeneID:509415|LOC509415:XR_084127:26_cdna Constitutive 0 NULL GeneID:509415 X PSEUDO LOC509415 NULL similar to ribosomal protein L4 EMBV3_31253 CTTCACATGAGCCAGAAACATACAGAGATGCTCCTGATTGCCTACAAGCCAGCCCCCGGA Variant GeneID:282071|SFTPC:NM_174462:55_cdna 227^349 1 EMBV3_01785 GeneID:282071 8 GENE SFTPC NULL surfactant protein C EMBV3_38588 TCTTTAGTAATCCCCCTGGCCAAATTCCATGCCCCTGTATAATCCTACAGGATGGGGACA Gene GeneID:788926|HK2:XM_002691189:104_cdna Constitutive 2 NULL GeneID:788926 11 GENE HK2 NULL hexokinase 2 EMBV3_16573 TCATCCGGGTCAGCATCGACAATGACCATGGCAATCTGTATCGGAGCATCTTGCTCACTA Gene GeneID:785402|RGL3:XM_002688872:247_cdna Constitutive 0 NULL GeneID:785402 7 GENE RGL3 NULL ral guanine nucleotide dissociation stimulator-like 3 EMBV3_07009 CCCTGGACTCGGCAGATCTAGGCCTTGGAGATCTAATTCCTGTGGATGTTAACCATCTGA Gene GeneID:519860|SERAC1:NM_001038550:29_cdna Constitutive 0 NULL GeneID:519860 9 GENE SERAC1 MGC134379 serine active site containing 1 EMBV3_09844 TGCTAACAGGTAGGAAAAAGTATGAAAACAATGTAAAATAGGGTAACGTTGCAATAGATC Gene BVV0102_392515 + 1 EMBV3_14210 GK000006.2:63128209-63302079 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28053 GAGCTAATTACTCATTTTACCAAAGGATTCTGATTAGAGAACTTGGTCCTCAGTAAATTC Gene BVT0102_437414 - 1 EMBV3_40669 GK000007.2:104642553-104692816 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214814 1 XLOC_130769 NonCoding TCONS_00214814 XLOC_130769 NonCoding NonCoding - 7:104645109-104651448 - TSS160570 1519 3 TCONS_00214814_1 73 0.0631994733377222 4 0.760965604291575 7.5652174899475e-09 0 0 0 0 0 0 0 0 0.000208579004173198 0.000253354440959227 3.16849732808014e-05 9.06687393128851e-05 1.23870764702644e-05 9.93983375977186e-06 0.000606409916881515 6.55783421135222e-05 9.35610657565955e-05 0 0 0 1.0974288290127e-05 0.000146426105694734 6.88205592854138e-12 3.46963786627843e-09 0 0 3.65451469366305e-05 3.44969494546679e-05 1.26457006600444e-25 XR_231546.1 LOC101905593 PREDICTED: Bos taurus uncharacterized LOC101905593 (LOC101905593), 0.0 1539 100.00 0.560895325872284 0 noncoding 0 0 0 0 ATTGATTTAGGGATTTTATTTTAATATACAGTACTATGTAGTAGATTTTGCTTTGTGATTCTATTTTAGTATCTTATTTCATATATTAGAATAGTCTAGTTGTATTCATTTATATGTAGTGTATCTTTGCTCTTAAGTTATGCTTTCTGGTATTATTGCTTAGTTTATCTTTTTGTAGAGGGATACTTTTCATTGCAAGTAAGAAAAACTTCAAATGAAATAAATTTAAAGTTTAAAGAAGGTACAAAGTTGGTGAGCTCCAGCCACAGTTCTATCAGGATGGCTGCGTGTTGCCGTGTTCATGTCCAGCACAACAGAAACTGAGGAAGACTCTCCTTCAGCCATGGAACTGCTGGGCAAGAGGATAGAGTGCCGAATAGCCAGATGCTTTAATTCCATTTTTAGCAATGAAGTTTGTGCATGTGAAACATGCATGTGGAACCACCTGGTTAGAAGGTTTTTTCCAACACTGTCAAAGCCTCTTCAGGAACAAAGCAAAGTCACCGCTCCGAAAAGTAAATAAGAGACTGGGAGAAAGGAGACCAGGTTTGGCCTCCTATGTCTGCTACTGACTGGGAGACTGCGATGCGCCGTACTTTGCTGAACCTCAGATTCTTCATCTCTGCATGCAGAGGGCTTGCCTGAGGCCCTTTCTTCTAAAACTTTGAATTTACTGAGGACCAAGTTCTCTAATCAGAATCCTTTGGTAAAATGAGTAATTAGCTCTTCCATTCCAAACACTTAAAAATTCTGGACAAAAGAAATTAAAGCCAGAAGCTATCCAAGATATACAAACAATAGATAAACTTGAAGTCTTTTTATCCAAGGGATTCAAAGGGTACCTCGAGCTCTGATTTTTCAGGGCTAATTTATTTACTCAATATGAGCTACAGCTAAAGGTACACTTGAGAAGATATAATAGGGGTTGCGGTTGCAAACTATATACATGGAAGTTGCTGGAACTGGGGTCCATTCATAAAGGAGAAAACAGGAAACACTCTTCACTGTTGAGAATCAGAACTGTTAGAAGGTCATTTATTATCTTGATTGAGTCCTACTGGACCATAAAGAGAAGAAAACACCAAAACATACCACGAGCACACTTTCACAATCCAGAGCACACACAGGGCTCTAACAGTAGAAAATCAAACTCCAGCGAATCTCACTGTTAAAAAACACTAGAAAATCCCATGAGAAAACCACCAGAGACAGTTGGCATCCTTGGAGAAGAGACTTCTCACCTGAGGAACTACCTGGTGGTGTGATCGTGGCATCAGGGGTAGAATAAAGCTGGAGCGGGAAGAGGCCCTCAGAGGGGAAGCTCGGAAAGGCGGATGACAACTTCATAGATGTGCCTGGGCTGGTCTTCAGCAGGAGGCTTCGAGAATTTCAGAATGCTGGAGTATAAACTACTGGAGGCGGGGCTGGTTTTCATTCTAATAGAATCCCAAATAAAAAATACACTCAATGTTTTTCTGCAAGCTTTTCAAAATAAAATGATATCAAGCTAATATAACAC TCONS_00214788 TCONS_00214789 TCONS_00214790 TCONS_00214791 TCONS_00214792 TCONS_00214793 TCONS_00214794 TCONS_00214795 TCONS_00214796 TCONS_00214797 TCONS_00214798 TCONS_00214799 TCONS_00214800 TCONS_00214801 TCONS_00214802 TCONS_00214803 TCONS_00214804 TCONS_00214805 TCONS_00214806 TCONS_00214807 TCONS_00214808 s 3' 2558 TCONS_00214788 TCONS_00214789 TCONS_00214790 TCONS_00214791 TCONS_00214792 TCONS_00214793 TCONS_00214794 TCONS_00214795 TCONS_00214796 TCONS_00214797 TCONS_00214798 TCONS_00214799 TCONS_00214800 TCONS_00214801 TCONS_00214802 TCONS_00214803 TCONS_00214804 TCONS_00214805 TCONS_00214806 TCONS_00214807 TCONS_00214808 s 3' 2558 EMBV3_13066 CTGGTGGATCACTGACTGCCTTACAATTTACATTTTGCTCGTTAGATGGGTCCCCCACCC Gene GeneID:517232|RECK:XM_002689688:123_cdna Constitutive 0 NULL GeneID:517232 8 GENE RECK NULL reversion-inducing-cysteine-rich protein with kazal motifs EMBV3_27148 TTATAACAATTTTCTTATCAAAACATGTTGCTTTTAAAATGTGGAACAGCTATAATCACT Gene GeneID:535869|RNF128:NM_001076071:5_cdna Constitutive 2 NULL GeneID:535869 X GENE RNF128 MGC137489 ring finger protein 128 EMBV3_41302 TGCTGTAAACATCATACAATACCAGGACCACTCCCACCAATGGACGCTTGGCCTCAAATG Gene BVV0102_149414 + 0 NULL GK000022.2:5452370-5813594 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41978 AGAGCAATCAAGCAGGACAAGGAAAGCGTCCCAAAAAGGGCCTGGCTACAGCAAAGCAGA Gene GeneID:513959|PHF8:XM_002700122:50_cdna Constitutive 0 NULL GeneID:513959 X GENE PHF8 NULL PHD finger protein 8 EMBV3_02288 GAGAGATTTAGCCCAGAGCCTCACCCACAGGGAAGGAGCAGAGGTCTGTTAGACTGAGGT Gene GeneID:508160|PADI3:XR_083609:486_cdna Constitutive 0 NULL GeneID:508160 2 PSEUDO PADI3 NULL similar to peptidylarginine deiminase EMBV3_22880 CTGTAACTAGCTGCCAAAAACTATTCTGGCATCCTATGAAGCAATGCCATTTGTCATCAG Gene BVV0101_067782 + 1 EMBV3_10527 GK000014.2:64565156-64875134 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39224 ACTTGGTAGGAATCAATCGAAGTGTTTTTGCCCCCAGACAGTCACACAGACACAGGGAGG Gene BVV0102_147249 + 0 NULL GK000014.2:25009297-25052884 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10270 TTCGCCACCGCTATGTGGGAAGCGAATCCGTTACATCTGTGAGAACGAGGCCATCCCCAT Variant GeneID:539763|PARP11:NM_001082452:40_cdna 201^794 3 EMBV3_20026 GeneID:539763 5 GENE PARP11 MGC152112 poly (ADP-ribose) polymerase family, member 11 EMBV3_31507 CAGTTCTCAACAAGTGGAACCGTTAAAAATGACCTTGCTCTTCTCCGGCTCCGCTACCCT Gene GeneID:504538|PRSS42:NM_001114626:83_cdna Constitutive 0 NULL GeneID:504538 22 GENE PRSS42 TESSP2 protease, serine, 42 EMBV3_08026 TACTCTGTTCCTGAGCTGATCCCAGTCCTTGGTTCTCCAGCCTCTGAAATGAGCATCCTG Gene BVT0102_167844 - 1 EMBV3_05693 GK000011.2:99646486-100030817 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28552 AGCCATCTTCGATAGGGTGCTGACAGAGCTAGTGTCCAAAATGCGGGACATGAGGATGGA Gene GeneID:504943|RXRB:NM_001083640:80_cdna Constitutive 0 NULL GeneID:504943 23 GENE RXRB NULL retinoid X receptor, beta EMBV3_13287 TCCACCAAGAGCCTCTTCCTCGGCCAGAAGGAAACACGCTAGAGAAGAAGGGTGGCAAGG Variant GeneID:532990|H2AFY:NM_001046340:37_cdna 709^808 1 EMBV3_15949 GeneID:532990 7 GENE H2AFY MGC137823 H2A histone family, member Y EMBV3_35296 ACTTTCCCATCTGCATCTTCTGCTGTGGCTGCTGTCGTAAAGGCACATGTGGGATGTGCT Gene GeneID:512301|HAMP:NM_001114508:598_cdna Constitutive 0 NULL GeneID:512301 18 GENE HAMP MGC137038 hepcidin antimicrobial peptide EMBV3_43765 AGCCCGACCTTGACAACATCCGGACTGCCTTTGAACTTGGAGGCTCTCATTTTTTACAGT Gene BVV0101_012005 + 0 NULL GK000006.2:47723793-47822225 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203147 TCONS_00203148 1 XLOC_124112 NonCoding TCONS_00203147 XLOC_124112 NonCoding NonCoding - 6:47737078-47742551 - TSS152240 811 1 TCONS_00203147_1 105 0.160295930949445 2 0.852156432748538 0.000349545693510212 0.000160885694191791 3.88927150225372e-08 3.60203841821608e-08 0 1.45278429385614e-08 0.000539306395561756 0 3.11720601753827e-08 0 0 0 1.18090244986382e-08 0 0 0 0 0 2.7341395135582e-08 4.24265463411052e-08 0.00119407515926405 0 0 0 3.22839360893315e-08 0 2.35289156019133e-08 0 0 0 0 noncoding 0 0 0 0 -0.260437450094437 0.241413868636518 0.0148909963661219 0.778837975161845 TCTAAGACCCAGGCCTTGAACCCTCTTCATTGGAAAGTCCCAGAATTAAGGTTCTACTTGCGCTTCCTGGCTCTCAGTGTGGTCACTAAGGAGGAATTTGTGAGAAATGTGCATTCCCAGGCACTGTCCCAGACCCGCTGAGTTGGAATCGCTGGCGGTGGCATCCAGTAATCCCTGATTTAACAAGGTGACTCCGGTGCAGCCTCAGGTTTGAAGACCACTGCTCATCATTAGTTCAGCCCCTTGAAAGCAGGCTGCTTTGGGACCATCCAAGGGTGGACAAGGAATAAAGGCAGGCCTGGAGAAAGGATGGGATTGAGATGGACTGACAGGAGGAAAATGACCCTCTGACAGAAGAACCGCATGATGAGAACGTGTACCTCGGAAAGCTGGAGCATGTTCAGCGTCACTAAAGGAAGCAAGCTAGAGCCATAGTTTCCTGAGATAGCAAAGGTGCTCTGAGGCCCAAGCTCAGAGGATTTACCATGCTAAGGAGTTCCGGCTTCTCCCTGGAGGTTGGCAGGGAATACCGGATATTCAGAGGAAGCAGAAAGGCTCTCTCTGGGCCCCCTTTCTTCCTCAGCCCGACCTTGACAACATCCGGACTGCCTTTGAACTTGGAGGCTCTCATTTTTTACAGTATTTATAGTTCCCCTTACTTTTTACCAGTAGCCCCTGGACTTCCTGTGCCCAGCACAGCTGCAGGTCTGTGGCAGCCGGCCTCTCCATCTCCAGGGGAGCAGCTGACAGGCTGCTTACCACACAAACCCTCCCCTGACAGTGAAGAAGCAAATGATTTTTAAAGATTAGC TCONS_00203138 TCONS_00203145 TCONS_00203139 TCONS_00203140 TCONS_00203142 TCONS_00203143 TCONS_00203144 TCONS_00203146 s 3' 11888 TCONS_00203138 TCONS_00203145 TCONS_00203139 TCONS_00203140 TCONS_00203142 TCONS_00203143 TCONS_00203144 TCONS_00203146 s 3' 11888 EMBV3_32099 CTAGGAAAATGTCTACCTTTAACCCACAATTAATGAACTAAACAGCCAGTTGGCACGTGG Gene BVT0102_023540 + 0 NULL GK000030.2:4094223-4097602 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246162 TCONS_00246163 TCONS_00246161 1 XLOC_150918 Coding TCONS_00246161 XLOC_150918 Coding Coding NKAP X:4094976-4114673 j TSS184626 5203 1 TCONS_00246161_2 417 0.0985969632904094 9 0.736291632818846 0.000176170787897261 0.000406281121651382 9.11941874091291e-05 0.000123724028072805 0.00013183496845814 5.62998104875909e-05 0.000183219144410817 8.09545274303885e-05 0.000246585885408857 1.22318322857892e-05 5.468811933218e-08 3.76688296479743e-05 7.47677013136303e-06 4.27167715055886e-05 6.81338129123792e-05 0.00250915043828336 0.00146059697167827 0.00384471213232506 0.000271077744455257 0.000150559174237071 4.55359978320789e-05 0.0017264959137567 0.00143413836913166 0.0017134645992031 0.000365041675257487 8.94283662540121e-05 0.000126273314925923 0.000164209936451908 5.05007272813594e-05 0.000132063497994495 NM_001205809.1 NKAP Bos taurus NFKB activating protein (NKAP), mRNA. 0.0 4617 99.73 0.495098981356909 NM_024528.3 NKAP Homo sapiens NFKB activating protein (NKAP), mRNA. 0.0 2138 90.03 0.305208533538343 TCONS_00246161_2 sp|Q8N5F7|NKAP_HUMAN NKAP_HUMAN NF-kappa-B-activating protein; 1e-157 456 91.61 0.997601918465228 1 coding 0 0 0 0 -0.0462712590497196 0.710210675119709 0.0133470519844628 0.780074931687453 TACATAGACATACAATTGTTTATTTACTTACTTAGTTACACAGTACTTATTGTTCATACAGTTGTTTAGTGACACGTATCCTGTGGTCTGTCGTCCTTCCCTTTAAGTCTTTCAAGTCAACGATGAAAAAAGTACAGTCTCATGTAGAGCTTAGAATTGAGCAGCCTCATTCGGAACCCGAAGGATGAGGGAACCTTGTTGCCCCACCGGCTTCCTTACAAGAGTACACACATCCCGTCCCTGAGTCAGTAGGACCGCCTAGGTCTGGGGAAGGAATTTGCCGACGTACCCGGAACTGTTTCCAAGGTTTCCTCGGGTTCTGGCGGTGATAAGCCTGCCGGTCCTGGGAGCCAAGGCAACGGAGAATTTTTCCGGGCTCGCGCGAGCGCCCCCTTCACCCACGGATTCAGGGACCCAGCAATAGCGATGGCTCCGGTGTCTGGCTCCCGCAGCCCGGAGTGGGAGGCCTCGAGCTCCGGGGGGAAGCGTCGCAGTTCTTCGAAGAGCCCTAAGCCTAGCAAATCCTCTCGCTCCCCGCGCGGCCGCCGCTCGCGCTCGCGCTCTTGCTCTCGGTCCGGGGACCGGAATGGCCTCAGCCATCAGCTGAGTGGCCCCAGCCAAGGCTCCCGAAACCAGTCCTACCGTTCGCGCTCGCGGTCACGCTCTCGAGAGCGGCCCTCCGCACCGCGCGGCGCCCCTTTCGCTTCTGCCTCCTCGTCCGCCTATTATGGCGGCTACTCACGCCCCTACGGGAGCGACAAGCCGTGGCCTAGCCTCCTGGACAAGGAGAGGGAGGAGAGCTTGCGGCAGAAGAGACTAAGTGAGAGAGAGAGGATTGGAGAATTGGGAGCTCCTGAAGTGTGGGGACTTTCTCCAAAGAATCCAGAACCAGACTCTGATGAACATACACCAGTAGAGGATGAAGAGCCAAAGAAAAGCACCAGTTCAGCTTCTACTTCAGAAGAAGAAAAGAAGAAGAAGAAGAAGTCTAGTCATTCAAAAGAAAGATCCAAGAAAAGGAGGAAGAAAAAATCATCTAAAAGAAAACACAAGAAGTATTCTGATGATAGTGACAGCGACTCTGATTCTGACACAGACTCCAGTGATGAAGATACAAAAAGGAGAGCAAAGAAAGCCAAGAAAAAGGAAAAGAAGAAGAAACACAGATCGAAGAAATATAAGAAAAAGAAGTCTAAGAAGAGCAGAAAAGATTCCAGTGACTCAAGTTCTAAAGAGTCCCAAGAAGAGTTTCTGGAGAATCCCTGGAAGGATCGATCAAAGCCTGAAGAGCCCTCAGATTTGATTGGCCCAGAGGCTCCCAAAACACTTGCCTCTCAAGATGATAAACCTCTAAACTATGGCCATGCTCTGTTACCCGGTGAAGGTGCAGCTATGGCTGAATATGTAAAAGCTGGAAAACGTATCCCACGAAGAGGTGAAATTGGCTTGACAAGTGAAGAAATTGCATCATTTGAATGTTCAGGTTATGTAATGAGTGGTAGCAGGCATCGCCGAATGGAAGCTGTGCGTCTGCGAAAAGAGAACCAGATCTATAGTGCTGATGAGAAGAGAGCCCTTGCATCCTTTAACCAAGAAGAGAGACGAAAGAGAGAAAACAAGATCCTGGCCAGTTTTCGGGAGATGGTATACAGAAAAACTAAAGGGAAAGAGGACAAATAAGGATTTTCTGATTGTTCATCAGACGTTTTTAACAACAAAAAAGAAAGTTTGGGTTCCATATATACACACACAAAAAGATTATGATCTGAAAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCCTATAAAAAAGCTGCGTATTGATATAACTTTAGCAAGCTCTTTGGGTTATTTTGGATTAACCAAAACAACTTTCTGGTTTAAAAATCCAAATTATGAGTGAAATTCTACTGTGTTGGGGGAGGAGGCATTGAGAGAGAGTGCTGGTGAAATGAGGAACTGAACTCTTAATATTATGGGACAGTGCTGCCACGAGTTCTACATGATGCCCACCCCAAATGAACTTGTGGAAGTTAATCATTCCTCTGTGTTGATACAGGAGGCCACTTTTGTTAACAGAAAGAAGGCATGGCTGAAAAAAAGCAAATCTAGAATTGGAAGATTGACTTGTTTATTACAATATGCTGTCTGCTCTGGAAATAATGTATTTTGATTTTAGTCCCTACCTCCACCCCCAAACCAACCAACAGACCAAACAGCAAAGTCTAACCCATAGACTTACTGAATTGAAAATGTGAACATTAAGTTTAAAATTCCTAACAGGTTACTTAAGAATGGCTCTTTCAAATATAAATATTGGGAAGTCTATTGTGTAAATGTTAGTACATTATTTCCATCTGAACTGTGTTTAGATCATTATTTGAACATTGTAAATGAATAGGAATCAATAATAATCTTGAGTTTAATAAGGAAAAATATAATGAATCATTGCTTTAACTTCATTATGTCATAAGGATGAAGATAATGTGATATTAAAAATTTTTAAAGTCTGTACTTCATTTCATTTTAAACATGCTTAAACTTTTCAGTTTCTTTTTTACATCTGTCATTCAGGTTAACTTCTCACTTTATCACTTTTTTTGGCTACTATTGACTTTTGACTTTGGGAAAAATGAAAAATTCTGGGACTGTGAGATCATGATCTTTTTCTTCCCTCCTTTTGTTCAAGTTTAGTTGTTAAGACATAGGAGGGAAGTGGGAAGGGGATAATAGAAGTTTTGGCTGTTTTTGTTAAGGTTGTTTTGAACTGCATTATTATGTGCCTAAGATAAGTATAAATTATCTGAATGATGGGGAATTTCAGACTCTGCTGTTACAAAAGACCCTCTCTCCTTATAAGCTAACTTCCCAGATGACTCAGATGGTAAAGAGTCTGCCTGCAATGCAGAAGACCTGGGTTCGATCCCTGGATCAAGAAGATCTTCTGGAGAAGGGAATGGCAACCCACTCCAGTATTATAATAGTTGAAAGGTTTTTTTTTTAAGTTTTAAAACAAAACAGTGAAAGTATACTTGATATACTTTATTAAAGTATAGATAAAAAGTTTACTACTTAACATACATTCTAGGAAAATGTCTACCTTTAACCCACAATTAATGAACTAAACAGCCAGTTGGCACGTGGCAACATTTATGATGCCTGAATTTGAAGTGATTGTGATCTATCATCATTGTTGCCTAGCCTAATACATCTGTTCTTTGCAAAAGTTGAAACTAGGTCCCAAATTTGTGAGTCATAATCTGTCCATTTCCCTGTGTAATAAAACATAATTTTTATTTCCCATTTAAAAATTTTATTCTCAGGAATTCCCCGATAGTCCAGTGGTGAGGACTCTGTGCTTTCACTGCTAAAGGCCCAAGTGCAGTCCCTTGTCAGGGAACTGAGATGCCACAAACTGTGCAAAAGGGGGCCACATTTTTTTAAAATTTTGTTCTCTAAGAACATTAGTTTTTGTTACTAGTTCCTAGAGACTGAATGGGGTTGTTCTCTGATTTTCATTCAGTAGGCAAGGTAGTTTAAATGCAACAGTTGTTAAAAACTTCTTATTTTGTATTGGACTATAGCTGATTAACAATGTCATGATAGTTTCAGGTGGACAGCAAAGGGGCTCAGCCATACATAAACATGTATTCATTCTTTCCCAAATTCCCCTCCCATCCAGCCCGCCACATAACGTTGAGCAGAGTTCCCTGTGCTGTACAGTAGTCCTTGTTGGTTATCCATTATTAAATATAGCAGCATATATGTGTCAATTCCAAACTCCCTAACCCTTACCCCCATCCTTCCCCCTAAATGTAACAATTTTGTGATATGTGAATATTATGGATGTCCATTGGATTCTCCTGTATCCTCCACAGAGTAGATACTCAATAAATGCTTATTGAGTAAGTGAAAGAAAATATATTAATTTATTTCAGAATTTTATCATATCTTTCATTAAGATTTTTTCAGGAAAGATCTGCCAAAGAATAGCTTCGGTAGCATATTCTTTGGGAAAGAGGAGGGAAGAATAAAATGGCTAAGAGTGTTTTATTTTCAGCCCATTAGAGTTACTGCTTCAAACTGTGTTTTAGTCACTTGAGCCATAAGTCAAATGGGAGGGCTGTTGTAATTGAAATATATTTTTTTGTTCTCCAAGGAGACTTACCTAGTTCTCCCACCTCCTCACCTGTTGCTCTGATAAGATTTTCCCTCCTTTTCAATTTATTTCACAAATGTAACAGTTGAAGAAGAAGAAAGAAAAATTACCCACAGTTGTACCCCATCAATTGTCTTTAGTATTCTGTGTTCCTTTCCAGTGCTTGTCTACCTAAATACGTATTCTGATATACCTATAAGTAATCACTCATAATTTTGTCTTTGATGTTTAAGATATTACAGCCAGGCAAGACAGCTTCACAGACATGGTAGGAAGAAATGATCTGGTGTGAGAATGGAAGAAGGCCATAAATAGTAAGGGTGGTGATTGAACCTTCCCTGTTTCATCAAGCCAACCCTCAAGCCACCCTGGTGCCATCACAGTTGTGACGCTGTCTTGTGGCAGGCAGCATGTCCAGTTGCAGAATTTCAGAATGTATTGTTGAACAATGAGGCTTAACTTGCATTAAATAAAGACAACTGTGAGTAGGCAAACCCTTCAGACTGGTTATATTATGAGCTGTAGAACTGTTGCCATTTTTCTGTTCCCCGGTTGTGCCCATGAAAGAGGTATGTTCAGGTTGGAGACTCAGGCTCAAATGGGGGAACAAAGAGCCAAGGACCAATCTCAGTTTGGTCTGACAGGTGAATTTTATCTACTCCCTAAACTCAGCTTTTGTATCTGAAAGACTCTGAGCGATACAGATAGTGACGGGAAAAACCTTTTAGAAAATAGAAGACAACTTAGTGGTTACTCTGCTAATGTAGTGGAAGTTGCCAACTGGAAAATGAATGCAAAGAAAAACAATGCAGCTAGATTGTATGCCACAAATTTATTATTCAATAAATATTCTGTGGTTTGATGTACAGTATCATATTTTTAATATGCTCTGATTAGAAATCTCCTAAAATATTCTGGAAGATTCCAATACTGTTGAATTGGAAGATATTTGGATTCATTAAAACATATTTGGCCTCAATAATGTCCCTTAGCCATTTTTCTCGAAAGCGAATTTCTCCTGGTCTGCAGAG EMBV3_39585 TCACATGCAAATAGCTCTTCTCAGTCTCTGCCACCAACAGCTCTTGCCCCAGCCAGAAAT Gene GeneID:509606|PODN:XM_002686399:257_cdna Constitutive 0 NULL GeneID:509606 3 GENE PODN NULL podocan EMBV3_10892 CCTGATCCAGGGAACTATATCTCAGAACATCCTACCATGTCTATCATGCCACAGTGCAGG Gene GeneID:613523|EAF2:NM_001046507:95_cdna Constitutive 1 NULL GeneID:613523 1 GENE EAF2 MGC137120 ELL associated factor 2 EMBV3_02408 CACCCTCCAGAGTTTTGATGTTGCCCAAAGCAGAGTATATCAGCTCATGGAACAAGACAG Gene GeneID:613624|RGS18:XM_002693931:34_cdna Constitutive 1 NULL GeneID:613624 16 GENE RGS18 NULL regulator of G-protein signaling 18 EMBV3_13764 GAGCTGATGGAGCAAGAGACTGAGGCTCAGGACATGGCCATGGAGCAGAACCTACAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37480 GGCGGGCGATGTTCAGACTTCAGTTTAAGGCCAGCACATGGTGTTGCAAAGTGTCTGGAA Gene BVV0102_279324 + 1 EMBV3_16192 GK000010.2:7502909-7562213 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06696 CTTGTAATAATATTCAGAGTGCGGGGCTATTCCGCCGGCTGAGGGACTCAATCCGGAGAG Gene GeneID:317650|CAMP:NM_174831:64_cdna Constitutive 0 NULL GeneID:317650 22 GENE CAMP CATHL7 cathelicidin antimicrobial peptide EMBV3_05978 GGGCGGGTGACGGGTTCTTGAAGGAAGAGTTCATGGATATCCGGTTCATGGATCTTAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20909 CCTCAGGCGGCTACTTCCACCTGGCTAATATCTTCAATGGCCTTAAAAAGTTGGACCTGG Gene GeneID:512257|ZMYND12:XM_002686450:461_cdna Constitutive 1 NULL GeneID:512257 3 GENE ZMYND12 MGC133869 zinc finger, MYND-type containing 12 EMBV3_42884 TCTTCTATGTGAAACTTGAAATGAGGAAAAGCAATTCTCGTGTAAATCATGCAAGCGCTA Gene GeneID:505453|CREBBP:NM_001164022:69_cdna Constitutive 0 NULL GeneID:505453 25 GENE CREBBP hmm291030 CREB binding protein EMBV3_32690 CAACACGACTGGGTCATTCTATTGGACGTATGTTTGCATCTCTCTTTCCCCATAATCCTC Gene GeneID:513081|RPF1:NM_001083417:35_cdna Constitutive 1 NULL GeneID:513081 3 GENE RPF1 BXDC5 MGC140358 ribosome production factor 1 homolog (S. cerevisiae) EMBV3_42200 ATGTGCCCAAGACATGCAAGACAGAGGAGCAGAACACAGGCCCCAAGAGCAGTGACAGAA Gene BVV0102_061164 - 0 NULL GK000011.2:10292059-10409031 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43480 TTTGTGTTGGGAAAAATGCCCTTGCTGGGTGGGGGTGGGGTGCCTACCAGATAGAGCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41146 CACGGCTGCCCTGCCACCTGTGCCCACCCCACGATGGGCTCGAGGGCCTGTTTGAGGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25065 CTATGAGAACCGAGTGACCTTCTCGGATACTGGCTATGCATCCCCCGTGAAGTCAGACAC Variant GeneID:281258|F11R:NM_174095:183_cdna 355^726 1 EMBV3_04514 GeneID:281258 3 GENE F11R JAM1 F11 receptor EMBV3_16161 GATTCTTTGTTACTTGAATGTGGTTGGTCAGGCCATGGATGAGTGCCTTGCACACAGCAG Gene BVV0102_038214 + 0 NULL GK000001.2:67429625-67476517 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12868 AGTCTGGATATGCTCTTGCACACCCTGCTGATGGCTCGACTCTCCTTCTGTGCAGACAAT Gene GeneID:538941|LOC538941:XM_002697877:423_cdna Constitutive 0 NULL GeneID:538941 25 GENE LOC538941 NULL similar to olfactory receptor, family 1, subfamily F, member 1 EMBV3_38726 CTCCACTGAGCATCAGATCCATGAAGCATACATCGTTTCGAGACCACTAGCTGCCCTGAA Gene GeneID:539318|OXGR1:XM_002691963:9_cdna Constitutive 0 NULL GeneID:539318 12 GENE OXGR1 NULL oxoglutarate (alpha-ketoglutarate) receptor 1 EMBV3_38059 TCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGA Gene GeneID:100337385|LOC100337385:XM_002698263:933_cdna Constitutive 0 NULL GeneID:100337385 25 GENE LOC100337385 NULL hypothetical protein LOC100337385 EMBV3_05665 ACGGGGACAGAGTTACAGTTTAGGAAGGTGAAAAATCTGGGAACGGATGACGGTGAGAGC Gene BVV0102_273965 + 1 EMBV3_14490 GK000017.2:10828319-11479936 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25854 TGCACAACCTGCTCAGTGCCTTCTACCTGCTGCTTCCATGTCTGCTCAATCCCATCATCT Gene GeneID:525033|LOC525033:XM_002693427:44_cdna Constitutive 0 NULL GeneID:525033 15 GENE LOC525033 NULL similar to olfactory receptor Olr39 EMBV3_32506 GGATTTAAATAACACAGTTGCAAAGATTGCTGTCCCCAATTAGAGGTCTTGCATGCGTGC Gene GeneID:507975|FIBIN:NM_001015541:23_cdna UTR3_Alt 1 NULL GeneID:507975 15 GENE FIBIN MGC142766 fin bud initiation factor homolog (zebrafish) EMBV3_42680 CCAGAACTGGCTCGAAAAGAAGGATGTGGTAGGGCGAGCCGGAGCGTTTATACCTTATGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35750 ACTGCTGCGAATCCTGTAGGAAAGAGATTTGGGCCTCCTTGTTGGGTTTTGTGTTCGGTG Gene GeneID:538561|MGEA5:XM_002698446:440_cdna Constitutive 0 NULL GeneID:538561 26 GENE MGEA5 NULL meningioma expressed antigen 5 (hyaluronidase) EMBV3_09339 AAGGTGCTTGAACACTTCCCCCTGCTGCTGTATATCTTGGCGGCGAAAACACTAATCCTC Gene GeneID:615202|C1H21ORF51:NM_001114516:52_cdna Constitutive 0 NULL GeneID:615202 1 GENE C1H21ORF51 MGC165907 chromosome 21 open reading frame 51 ortholog EMBV3_31500 GATTGAGAACACAATGTTTATCAACAAGATGCGGATGCTGGAGTCAGGGCTGCCAGAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19254 CGATAAGTAGGCGATAGGTCATCTCAGGACAAGGGAAAGGAAGCTCTGAAGAACTACTAC Gene BVT0102_027269 + 0 NULL GK000012.2:20904087-21083060 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00038708 1 XLOC_022530 NonCoding TCONS_00038708 XLOC_022530 NonCoding NonCoding - 12:21082061-21082750 - TSS28209 689 1 TCONS_00038708_2 66 1 0 0 0 0 0 0 0 0 0 0.000171773565282344 0 0 0 0 0 0 0 0 0 0.000374679385576364 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 GTAACACAGCCATCTAAGAAAACGAGGAGGTTGACAACACAGGTCATCTCTTAAGTTCCTTCGAAGATGCTTGCATGAGGTCTTTTCTTCCCCGACTCCTGGCGCTCCACTATTAAGGACAGTGGCAGGAGTACAGCGACAGTCCGCTCCACCGAGGGCTGCCCTTTGGTTCTCTGTCTTAGAGGACGGTGCAGGCGGTGACTCCGAGGCCACCAAGCTCCCCAGGCCAGGAACGATAAGTAGGCGATAGGTCATCTCAGGACAAGGGAAAGGAAGCTCTGAAGAACTACTACTCCCAGGAGACCACGGGGTACCACTCGGCGGCCCGAGGCAGACGCGTGTTGGGAGCAGCTAAGCATGCTCGGTGGTCAGGCCCCCGCCTCGCGAGGGACAGATAACTCGTGCGCATGCCCAACCTCTCGCCAACACGTTCAAGCTTCTTTCCTTCCTGCGGGATTCTTTTCTTTCCGGCCTCGCCCAGGCTAGCTTTTCCCCGCCCCACCAACGCCCCCTTTTCAGGGATTTTTGCGGTGGGCGGGATACCCCAAGCGCGTTCCCAGGAGTGTGTACGCGCGCGTTCCCGGGAGATGAAAGAGGGAGGGCACTAAACACTGGGTGTGGAAGGTGACCAGGGGACCGCGGGTGACGGAAGGCGCCTGCGCTCTAGAGGCGGTGCGGCGAGGCTACGG TCONS_00034786 . 5' 206 TCONS_00034786 . 5' 206 EMBV3_02918 TCCACATGTCTCAAAGCAACTAAGCCTGCATGCCATAACTATCGAGCCCACGTGCATCAG Gene GeneID:522540|LOC522540:XM_002696546:5_cdna UTR3_Alt 1 NULL GeneID:522540 21 GENE LOC522540 NULL similar to myeloid-associated differentiation marker EMBV3_06924 CGACATGACAACATTAAACAATCAGATGAGGTGTATCGCCGGGGGCTTCAGGCAATACCT Variant GeneID:505547|PRPF39:NM_001109789:169_cdna 580^811 1 EMBV3_38335 GeneID:505547 21 GENE PRPF39 NULL PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) EMBV3_03740 CTTCTGGAGGAGCAAACCATGGAGTACGACAGAGAAAGTCTGGGACACAAGGGATCGGAA Gene GeneID:520552|GAL3ST4:NM_001034537:212_cdna Constitutive 0 NULL GeneID:520552 25 GENE GAL3ST4 MGC139934 galactose-3-O-sulfotransferase 4 EMBV3_26384 GATCAGAAATTGACCTTCTGGACATTCGAGCAGAGTTTAAGAAGCTTTCTGGCTACTCCC Gene GeneID:518050|ANXA3:NM_001035325:1_cdna Constitutive 1 NULL GeneID:518050 6 GENE ANXA3 MGC129048 annexin A3 EMBV3_18207 GGCAGGGGCTTCAGCCTGGAGGAGCTAAGGGCTGAAGAGCTTAAACTGGCCACTCAGCTG Variant GeneID:508221|RPL13:NM_001015543:144_cdna 292^465 2 EMBV3_14037 GeneID:508221 18 GENE RPL13 NULL ribosomal protein L13 EMBV3_17867 TTGATTGATCGAACCAGTAGAAACCGCTGCCAGCAAGGCAGACTCTGCCGTCAGCAGCTT Variant GeneID:535597|RORA:XM_002690848:188_cdna 477^733 1 EMBV3_12633 GeneID:535597 10 GENE RORA NULL RAR-related orphan receptor A EMBV3_37373 TAAGGGCCCGCAAGTGCAGTCCTTCGACTTCAGCACAGCTTTTGACCTGCAAGGAGTTTT Gene GeneID:506387|LAMA1:XM_002697797:398_cdna Constitutive 0 NULL GeneID:506387 24 GENE LAMA1 NULL laminin, alpha 1 EMBV3_37098 CTGTGTTGGGGGAAAATTCTTAGGTCCTTGCACTCCCTTTTGGAATGTCGTACTCTGGCC Gene BVV0101_049457 - 1 EMBV3_11952 GK000011.2:2494782-2526185 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12042 AAGTTCGAAATATGGCAACTTTGAAAGATACCGCCAAGCTGTCATCACCAAGGAGCTGAT Variant GeneID:327668|ATP5C1:NM_001075136:2_cdna 123^864 2 EMBV3_21617 GeneID:327668 13 GENE ATP5C1 NULL ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 EMBV3_15921 TTGAAAGGGGACTACGTTTTAGCAGGAAAAAACTTCGCGTTTCTGTGCTGAGCAGGCTGC Gene GeneID:532933|UPF1:XM_002688526:107_cdna Constitutive 0 NULL GeneID:532933 7 GENE UPF1 NULL UPF1 regulator of nonsense transcripts homolog (yeast) EMBV3_09327 GGACCAGCAGCTCGAGTTCATCAAGGAGCTGGCGGACCATCTCACCAACGTGTGCAAGAT Gene GeneID:527431|LOC527431:XM_002700235:224_cdna Constitutive 0 NULL GeneID:527431 X GENE LOC527431 NULL similar to hCG1816984 EMBV3_25436 GATCCCATATGCCTTGGAGCAGCTAAGCCCGTGTACCATAACTAGAGAGTCTGTGTGTTG Gene BVV0102_393937 + 0 NULL GK000005.2:114024524-114071007 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196614 TCONS_00196617 TCONS_00196615 TCONS_00196616 1 XLOC_118392 Coding TCONS_00196615 XLOC_118392 Coding Coding LOC618369 5:114068755-114094795 j TSS146270 4265 1 TCONS_00196615_3 355 0.0729191090269636 3 0.836322439417796 1.29015318487759e-29 2.37844252698345e-06 4.30111647760279e-06 3.61944400280939e-06 7.57487031988379e-07 5.60392365518189e-89 2.53871745414496e-06 6.61377331614297e-07 3.37047878969436e-06 1.73613179920787e-06 5.95939035832945e-07 1.52785426100824e-06 1.18024446532457e-06 2.16139886587895e-06 5.15256369267139e-10 1.43106466096227e-09 0.000268010646817827 0.0032789357024398 0 6.48689730651012e-07 4.65530490601896e-07 0.001075685170565 2.31764033793592e-07 0.000889680535119368 2.86864179638292e-06 0.000169260950798759 2.42946504463681e-06 3.62066146647162e-06 2.16982769405481e-06 8.95738499049772e-07 XM_005207454.1 A4GALT PREDICTED: Bos taurus alpha 1,4-galactosyltransferase (A4GALT), 0.0 7654 100.00 0.994841735052755 XM_005261647.1 A4GALT PREDICTED: Homo sapiens alpha 1,4-galactosyltransferase (A4GALT), 0.0 1413 84.04 0.307385697538101 TCONS_00196615_3 sp|Q9NPC4|A4GAT_HUMAN A4GAT_HUMAN Lactosylceramide 4-alpha-galactosyltransferase; 0.0 603 86.69 0.991549295774648 2 coding 1 1 0 0 -0.255926119596322 0.429445871410092 0.00964156603081787 0.835560328379449 CTGCCCGTCCGCCGCCTGCCGCCCGCCGGGCCCGCGGGGCCGCGTTGTCCGCCGGCCGGAGCCGCAGGAGCCAGAGATGGATTTGCGGGCATGGAGAGCATGGGGAAGGACCCGGTTCCTGCTGGCAGAGAAGGCTGGCTGCTGACCCAGGACCAGCCGATTCCTGCTGGAGGCTCCTGACATCTGGGGAGATGACTTCGGCGCCCCCCGACTGCCTGCTGCGGCTGCTCCGGGACACCCCGAGGCAGCGGGTCTGCACCCTGTTCATCATTGGCTTCAAGCTCACCTTCTTCGTCTCCGTCATGGTCTACTGGCACGTCGTGGGAGAGCCGGGGGGCCAAGGACAACTCTCTAACCTGCCTGTGGACGTCCCCTGCCCCCACATGGTCCCCCCGACCCCCCCGCCCTCCGGCATCCCGCCTCCAGGCAACATCTTCTTCCTGGAGACCTCTGACCGGACTAACCCCAACTTCCTGTTCATGTGCTCCGTGGAGTCAGCTGCCAGGGCGCACCCCGAGTCCCCAGTGGTGGTCCTGATGAAGGGACTGCCTGGCGGGAACGCCTCCCGCCCGCGGCACCTGGGCCTCTCGCTCCTGGGCTGCTTCCCCAACGTCCAGATGCGCCCCCTGGACCTGGGGGAGCTCTTCCGGGACACGCCCCTGGCCGCCTGGTACGCGGCTGTGCAGCGGCGCTGGGAGCCCTACCTCCTGCCGGTGCTCTCGGACGCCTCCAGGATCGCGCTGCTGTGGAAGTTCGGCGGCATCTACCTGGACACGGACTTCATCGTCCTCAAGGACCTGAGGAACCTGACCAACGCGCTGGGCACCCAGTCGCGCTACGTCCTCAACGGCGCCTTCCTGGCCTTCGAGCAGCACCACGAGTTCATGGCGCAGTGCATGCGTGACTTCGTGACCCACTACAACGGCTGGATCTGGGGTCACCAGGGCCCGCAGCTGCTCACGCGGGTCTTCAAGAAATGGTGCTCCATCCGCAGCCTGAGCGAGAGCCGCGCCTGCCGCGGCGTCACCACACTGCCCCCCGAGGCCTTCTACCCTATCCCCTGGCAGAACTGGAAGAAGTACTTCGAAGACATCAGCCCCCAGGAGCTGACCCGGCTACTCAATGCCACCTTCGCGGTCCACGTGTGGAACAAGAAGAGCCAGGGCACACGCTTTGAGGCCACGTCCAAGGCCCTGCTGGCCCAGCTCCATGCCCGCTACTGCCCGACGACGCACAAGGCCATGAAGATGTACTTGTGAGGGGGCCTGCCAGCTCACCTCCCTGCACCTGGCAGAGAGGAGCTCTGGGGCCCGCCTTCCAAGGGGAGGTGAGATGGGAGGGCTGGAGACGGGGAGGCTGGGCCGCTGCAGCCCCAGGGTCTGGGGCAGGTGGTGGGGAGGACGGGGAACTGTTGGCCAGAGAGCTGTTACTGGAGGGTGCGCTGCGGCCCCTGGGGCCTGCTCTGGTGAGCCAGAGCCCTGGGCCCATGTACCGTCACAGGGTTGAGACAACCAGGGGTGGGGGAAGCGTCTCCAGACAGAATGAGCTGGAGTGGGCCGGGTGAGCACACCTGGGTCTTGTTCACAATGGGCAAGCCCGGTGGATATGAAAGCACCTTGCAGGGTGGCAGGCTAGGCTGAAGTGCCCACGAGGTCAGGGTGGGGCGGGGGGAGCACGGAGAAGCGGGTAGGAAGGAGGGGGAGGAGGCAGCTGGTAGCGGGGCTGGGCAGCAGACCCAGCTTCAAGAGCCCATGGGGTGGGGTGCTTTGGGGTTTGGTTTCTTTTTTCCGGGGTGGGTGGGCAGCCGGCAGAGTTGGCCTGGGGAGCTCTTGGGGAAAGCCCTGCCTGCCCACCCCGTCCTTTCTCCCAGAGACGTTGCAGGAGTGACTCGGGCCAGCTGCCCACTCAGGGGCAAGGGGCCTGGAGTCCTTTTGGCTCAGGAAAAGCATTTTAAAGAAAACACCCCCTACCCTGCCCGCAGTAAACAAATAAAGTGAGTCACCCACATCCAGCGCTTTCTGGTGGCTGAAATGCATTCATTCGCATCGCTCTTGTGAGCCCCACCCTGCAGCTGCGGGCAGGCATCTGGGCGGGCGTTGGTGGTGACTCGCCTGAGCGTACACAGCCTGCCTTGGTCAGAGGGGTCCGGGGGCCTGGCTGCTGGGTGGGCTCCGGGCCTGGGTGCTGAGAGTGACTGCGGTGGGCAAGGGGAGGAGACTGTCTTCCCACCTCATTTTTCAAGGCTCAGACAGCCTCGGTTGGGTCCCCCCAGCACCCCCACCTCCACCCCATAATCAGCCTGATTCTGTTCTGGCCTGAACTGAGCCAGATGAGGAACCCACCACCCGGGCATGTGCCTCCTAGGTTAGAGGAGCCCCAGGGAGAGACGTGCGAGGCCTATGGGTTCCTTCCTGGCTCACGCTGGCTGGCTGGCTGAGAACCTTGGAGAGACTGCAGTGCCATGCTGGCAGCTCCAGGGATGGGCCAGAGGAAAATCTCGCAGGGTGAGGCCCCAGCTGGTTTGTATTGAGGAAGAAGGCTTCCTGTGAGAGCTGGGCCTTCCAGCAGGCTGGAGAAGCCTTCCCTGTAGGACAGAGGACTGGAGATACTGTCAGGAACTCGGGCTCAGCAGGCTGCTCTTTGGCAGCCAAAGCAGAGGTGTTTAGAGGCCTCTGGATCCTGCCAGTAGAAGATCGTGGGCAGCCTGGTAAGGAGGTGAGGTCCCTGGCTCTAGGGGTAATCAAGAGCAGGTGATTTTTTTTTTATTAAAACAATGGATGTATGAGGTAGTTCTCCAGCCATCATCTCACCTGTTTTTAAAATCTTTTGAAAATGAGTAGATTTTACTTTTAATAGTACAGCCTGAGGTGAGAGCTTGCTTGCCCTCCTCATCACCTGTGGGTGCAACACCCACAGTCCAGAGCCCTTCCTGGGCCCCTGGGCCTGGACTGGATTCCAGAGAGATCCTCTGCTTCCTTCTGCCCATCCCAAGTTCACCATCGCCTGAAATCGACAGCGTCAGTCTGCTGACCCTGTCAGAACCTTTGTTGGGCATTCGCTCTTAAATTCTCAGAAAGGAGAAGGAAGGGAGGGGTGGGCTCCCGTGGAAGGCCGCCCTGGCGACAGTAATCAGATCCTAGGAATCCTGTTGTTTGTTTCTGGCCGATGTTTTTACAGATAATTTTGTCTGGGGGAGATGAGGTCCCATCCCTCCACTGGGGGGCAGTGTGTGGTCCAGCAGGGGCCTGAGTCAGGTTTCCTGTCAACTGTTTAATGAACCCTCCAAGCAAACCAGTCACAGGCAAGCAAGGAGGTAGCATTTCCAGCAGCTCTGGGGTAGGGGAATAATTCCCCCTTGCTGCTGTATCAATATTCGACTAGTTTAAACATTCAATTGGAATGTCCTCTATCTGAGAAAAAAGATGGGGGATAATTTAGGACTCTGTTCCTGGAAGTCTGGTTTCATGGTTTACTTGTTCCTAAATTTCTGTTTGTCCTAAAGTGAACCAGCCAGAGCAAGGCATGCTGGGAAGTCTGCTGTGGACCAGCTAGTGCAAGGCATGCTGGGAAGTCTGCTGTGAGGTGGACAGGGCCAGACAGGCCTTCAGGACCTGACAATGGACAGAAGACTCAAGTGCAATCTAGGCTCTGCAGTGGGGGTCGGGGAGGTCATCCCCTTCCCTGGGCTGGGAGCAGAAGCAGGAGGGAAAGGTGGTAGGTGAGACTGCTGGGATGTCGGGAGGAGGCACCCTCAAACAGGAAGACATTCCTTGCAGATGTAGTCCACCACCAACAAAAACTGGAACTCAGCACCAGCACCCACCAACTTCCAAGGAAGAAAGATCAGAGAGGAGGTCCTGGCTGCTAGAAACAACGCAGGTGGCTGAAATCAGGAGGGCACTTTTTTTTTTGCACAGTGTTTATTTATTTGTTTGTTTGGCTGCATTAGGTCTTAGTTGCAACACGAGACATCTTCGTTGTATCGTGTGGGATCTTTCTCTGCAACACACAGACTCTCTAGTTATGGTACACGGGCTTAGCTGCTCCAAGGCATATGGGATCTTAGTTCCCCGACCAGGGATCAAACCCATATGCCTTGCATTGCTAGGTGGATTCTTAACCACTGGACCACCAGGTAAGTCCCAAGAGGGCATTTATTATCCCACATGATATATTGGCTAAGGTACTTGAGAAGCTACTGTAACAAAAAGACCCCAAAATAAAGTCACTTAAATAAAGTAAAAGATTGTTTCTCTCTCAAATCA EMBV3_08033 AAAAGCCTACCTCCGAAATCCCCTTTTTGTTCTTCCTGGACCTGGGCATTCAGCTCCTGC Gene GeneID:513235|DPF2:NM_001100356:610_cdna Constitutive 1 NULL GeneID:513235 29 GENE DPF2 NULL D4, zinc and double PHD fingers family 2 EMBV3_26122 CTCCAGTGAGCACAGGCTGGACCTTTTAGATTCTACAGAGCTGAACACTGAGGATTTCTG Gene GeneID:515399|STAG3:XM_002698135:510_cdna Constitutive 0 NULL GeneID:515399 25 GENE STAG3 NULL stromal antigen 3 EMBV3_38978 AGGCACTTGGTTCCTTGCTGGTATTGTAAGCTGGGGAGATGAGTGTGCCCTTCCAAACAA Gene GeneID:100140490|LOC100140490:XM_002688297:72_cdna Constitutive 0 NULL GeneID:100140490 6 GENE LOC100140490 NULL similar to airway trypsin-like 3 EMBV3_36327 GACCAGTCACTGGCCACTTGGAGCATAATGATAATGAACAAGTCAATAGGATGGTTTCAG Gene GeneID:514564|ZWINT:NM_001040529:2_cdna Constitutive 1 NULL GeneID:514564 26 GENE ZWINT MGC134448 ZW10 interactor EMBV3_26826 GTCTGAAGAGAAAGTGCCCCTAAAATGTCTGAAACACATGACTCTCCATTGTGGTGACAC Gene BVV0102_042259 + 0 NULL GK000003.2:118372426-118630616 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171587 1 XLOC_103842 Coding TCONS_00171587 XLOC_103842 Coding Coding ASB1 3:118353222-118378061 = TSS127954 6751 1 TCONS_00171587_1 332 0.0436972300399941 5 0.728400032208713 0.00087466715639769 0.000480764043892975 0.000319387818011646 0.000390246396975488 0.000521434878399213 0.000151009039926674 0.00039995312940934 0.000102506513502183 0.00028400193013354 0.000121283428699428 9.5622712960041e-05 0.000112794024488864 1.8595216903103e-05 4.66846127528406e-05 4.72699032624636e-05 0.00145535870336439 0.000489388363954278 0.00017468109930368 0.000622451425418775 0.000674780581308598 0.00041279833147176 0.000183565132195809 0.000273197097947292 0.00024164725431664 0.000597855071036482 0.000680440002016779 0.000299003554917752 0.000248985693386786 5.75272960101379e-05 0.000107759158323774 NM_001206273.1 ASB1 Bos taurus ankyrin repeat and SOCS box containing 1 (ASB1), mRNA. 0.0 2003 100.00 0.164271959709673 NM_001040445.1 ASB1 Homo sapiens ankyrin repeat and SOCS box containing 1 (ASB1), mRNA. 0.0 1270 77.35 0.237001925640646 TCONS_00171587_1 sp|Q9WV74|ASB1_MOUSE ASB1_MOUSE Ankyrin repeat and SOCS box protein 1; 0.0 653 94.05 0.996987951807229 6 coding 0 0 0 0 -0.468045067595246 0.310870856765493 0.0129569689748723 0.791326167891333 AGCCCATGGCGGAGGGCGGCGGGCGGGCCGGGCCGGCGCCCGCAGGTCCTAATCTGAAGGAGTGGCTGAGGGAGCAGTTCTGTGACCACCCGCTGGAGCACTGCGAGGACACGAGGCTGCACGACGCTGCCTACGTGGGGGACCTGCAGACCCTGCGGAGCCTGCTGCAGGAAGAGAGCTACCGGAGCCGCATCAACGAGAAGTCCGTGTGGTGCTGCGGCTGGCTCCCCTGCACGCCCCTGCGCATCGCCGCCACCGCGGGCCACGGGAACTGCGTGGACTTCCTGATCCGCAAGGGGGCCGAGGTGGACCTGGTGGACGTGAAGGGACAGACGGCCCTGTACGTGGCTGTGGTGAACGGGCACCTGGAGAGCGCCCAGATCCTCCTGGAGGCCGGCGCCGACCCCAACGGAAGCCGGCACCACCGCAGCACGCCTGTCTACCACGCCTCGCGCGTGGGCCGGGCGGACATCCTGAAGGCCCTCATCAGGTATGGGGCGGACGTCGATGTCAACCACCACCTGACTCCTGACGCCCAGCCCCCTTTCTCGCGGCGGCTCACCTCCTTGGTGGTCTGCCCGCTGTACATCAGCGCCGCCTACCACAACCTGCAGTGCTTCAAGCTGTTGCTGCAGGCGGGGGCGAACCCGGACTTCAACTGCAACGGCCCTGTCAACACGCAGGGCTTCTACAGGGGCTCGCCCGGCTGTGTCATGGACGCCGTCCTGCGTCACGGCTGCGAGGCAGCCTTCGTCAGCCTGCTGGTGGAGTTCGGAGCCAACCTGAACCTGGTCAAGTGGGAGTCCTTGGGCCCAGAGTCGAGAGGCAGGAGGAAGGTGGACCCTGAGGCGCTGCAGGTCTTTAAAGAAGCCAGAAGTGTCCCCAGGTCCCTGCTGAATCTGTGCCGCGTGGCTGTGAGAAGAGCGCTCGGCAAATACCGCCTTCATCTGATCCCCTCGCTGCCTCTGCCAGACCCCATAAAAAAGTTTCTGCTTTACGAGTAGAATTCCGGAGTGCCATTGATTGCAGTGAAGAGGCGGCGGTGACCTGCAGTGCAAGTTGACACCGACTCTCGCCCCGTGACCACGTCCTGTGCTGCCGAGTCCCACCCGGCTGCAGGTGAAGCAGGACTGGCTTTGTTCCCCTGGACTGTGCTCTATCTCAGGTGTTTGGGCATCGGACAGTTTTGGGGTCAGTATCAGTATCAGCCGGGAGGCTCCTACACAACTTTATTTTGTGCTTCCTCAGTCTGTTTGTAAATTAATGCAGTGGGCCTTGAAATGTGAGCAAGTTGGGGCTGAGGCTGGAGGCCTGCTGATATCCTGAGTAGAGAGGACTGGCATCTTCCAGACTGCTTCTGGGTTCACTTCTCAACTTGATGGCTTGATTGCAGTCAAATGAAAAAGGGAGTTTTGGTAAAAAGTAGAGTACAGAGACACAGTTCGTGAACTTGAGAGTTTGTGTTCCCAGCTCCTGGGTTGAACATGTGATGTTTACACACACACGCACACACACATGCACACGCTTTCCTTGCCACCTCAGTGTTCTCTCCATGTGGTGGGGGCGTCGTGTCAATTGGCTTCATTCAAGGATGGTTTCCTGGCCACTTGGGTTGGCTTTACTGTCTCAAGGTTAGTACCTACAGTGTTCACAGTCTCTTTAGGTAATGCTCAGAGCTCGACACCTAGCCCCATGCCCAGCTGTGCCTAGCATCATGCCAACAGGTCTCACGAGTTCTCTGCCATTTCACTCTCGGAGCTTCCAGAAGTCCACTGATTTCAGGAGGCCCACTGCCTCCATTCGGACCAAGGACCGTCCAGCAGCATCCACTGCCAGTTCTAACAAGTCCACGCACGCACTGTGAAGTGGAAACTTGACTCGTCTTCTGGGTGGTTCAGAGCTTTCAGTTCCATGGTGTCCTGTGGACAGAACATCTGGTGTTTGGCTGATTGTGCTTCAGTTGTTTGGACCTGATGTCTCGGTAGTTGCTCCTAGAACTGAACAGGGGGATAGCAGTGAGGTTAGAGGTTTCCTGTGGCCTGCTGGGGGCTGGGGGAGGGAGAGGACTGAGCTGGGTTATCACCTGACAGCTCGGCTGTGGTCAGGGCTGCGTGGCCAGATGTGTGTCATGCCGGCACAGGTGGGCCAGTGGCTGCCTCTTTGAAGTATCCAGGTGCCACTGTTTGCAGGGAAATCACATCTGGTTGTTGAGGCCTCAGAACCATTGTGTGGATCCATGGAAAGTGTTTAGAAATGGACAGATTTCACATCTGTGTTTAGATTTTCTGTAAGAGTTGAACAAATGATATGGGTTTATTTAATTATCAGCATTGTTGTGTGTCTTCACTGACTAGACTACCAGCGTCTGGTCATGGTCTTCGTGATTGAGGATGGAGTTCTGAGTCTGTCTCCTGGCGTGGGTGGACATGTGTTGGAAGCCAGGCAGGCCCATGTGCACACGAATGAGGTCTTAGGGGAGAGAAATCTTCGGTGATTCAGAGGGGAAGATGCAGCCACTGGAGTTCGTTGCAAGCTGAGGCCGCGGCCTCGGAGGCTCAAAAGTGGGCTGTAGGCTGCCGCTCTTGGCTGCAAACCTGCTGGGTGGGTTGCATTCAGAGCTCGGGGTCCCACCTGCAGCAGGAGAGGCATCCTGAGAGAGGAGGGGCCGTGGGCAGGTGGCAGATGGCATATTTGCCACCAGATCCGAGCACTGCTGAGATTTGGTCTGGGAGAGTGATAGTGTGCCGGTGGCCCTCTCGGGCAGTGGCTTCCATCGCAGCTGTTGGGGGAGGGCTCTCCCTCCTATAGGGAAGGGTTGTAGGATAGCTGGAGCCGCTGGAGAGGGGCGGAGCCACAGGAGGGGGTGGAGCTGCCAGCGAGGGGGCGGAACCACTGGAGGGAGGGTCCCTGGCAAGGCAGCACATCCCCTTCTCAGTCTGGCTAGAGGAGTCTCAGGAGCAGCTCGCTCACCTCACTTTGCACTCCTGCAGCTGCCCTTTGGCCTGGATTCCCTTCCTGGGGCCTGTGCTGCAGGCTCGCAGGACCCTGTGTGCCCTGCACTGCTGGGCATTGTCTGCAGGGGTTTGTTAGGGACAGAGCCTCCCTGGGGTGGGAGGTGACTGTTCACAGACCTGGAAAGCAGCATCGGGGGCGCTGCCAGGCAGGAGAGGCAGGGGCCCCCGGCTGGCCTGGCACGGTGGCTGTCTGGCTGCTGTGCAGGGTGATGTGAGTGCAGGACTTGTTTCTGGGGGATGGAACCATTTTTCTGGGGTCTCTCTAGAGGACTGGACTGAGTTGATCCTCACTGTTGGGCCTGGCCCAGACCTGGCCAGGGAGGGACTGGGACTCGGGAGGGGTTGAGCCAGGGAGTGGGGGCCCCCGCACCGTGCGCCCCAGAGCGTGGTGGGCTCAGAGCTAGTCATCCTTTATAGAGGCAGGACCCAGCCTTTAGATAATTTTTTCAGACCCCCAGCAACTGAGGTTCAGCCTCTAGCTTGAAATTCCATATGTGCCACACACGACTCTGAAAACAGCATAGCTATATACTTAGGGCCATTTCTTCTTGTTTTGAGCCTCACGTTACTAAAGCTCCCTTTTTCTGTTGTTGGCAGGGATAGGTAGGGTACAGACTAGGAAGGAGTCTCTCTCTCCACAGAGCACTTTATAAAAGCCCAGTCTCCAAACCCCGGGGTGCCCACTGCCATGTAGCCAGGAAACGTGGACATGGGTGATGAGGTTGTGGCCCAGAGCACTGTGCCCATGGGGCGGGGCACGACAAACCGATGGGCAGGAGCTGGGGCCCCCAGCCTGTCTCAGGAGTGTGCTCACTTGCTAGGGCGCCTGAGGGCCGTTCGGCTGAAGGAATCCTGTGCTCGGGGCCTTGGCTGCAGTGGACGAGTGGGGCTGAACCTAGGGAGGTGGGGCAGCGCTGAGACCTCGGAGAGGGTTCCGCTTTGGTGTCCTGGTGGGAGTTCCGAATGTATTTCCAAAACCTATCAATGTCATATGTATCCGTGCCTTTTCATGTTATTTTTGGTATTTATGTATTTATTTATTTATGCCCTGCCTTGTTCCAGGAAAGGGTTCAAGGTCGTCATGCTTGGTTTTGATGTTCTCTTTTGACGTTTGATAAGTTTTAGTCAACATGTGCTTGTTAAACAGGACGTTTTAAAAAGAAAGGACAATTTCTTTTCAACACAGTTTGCTCATGTTGAATATGTTTCTGTTATCAGGCCTACGTGCCATCATTTTCCCCCTTTCTTCATGGAGCAGTGTAAGAGAGGAGCCTGCAGGCAAGGTTGGACCCAGCCAGGGAAAGTCCGCCTTGGAGAAGAAGGCTCCTCTGTGCTGAGCTGCCTCCTGCCTGGTCCTGAGCAGGCCCGGCTACGGGCCGGCCATGCTTTTCCTGTGGGGCTCTTGTGAGGACACACGGGAGAATGTCTGTGAAAGCACTGGGCACTTGAGCCGTCCTGGTGACGTGTCAGCGCTGTCTCTGTGCATGTGGTCCCTCTTCTCAGCGGATGTGCCTTTGAGGTGATGACGACCTGTGGCCTTGCTGGTCGGCTGGGCTTTGTGCCCGGGGGACAGTGAGAGTCACGGTGACCGTGACACAGGCCTCCTGCACAGGTCAGAAGGGCAAGGATGCGCGTGAAATCACATGGGAAGTCAAGTTTACTCCATTTAGAGGGTTGTCTTTTAGTCTGAGATTATGTTCTTCCTAATTTGGGTGATAAAATGTCCTTTTATGTAATGAAGGTGATAATAGAGGGCAACGTTGTTGGTTTTTTTTAATGCACCTGGTTGCAGAATAAAATGTTGGCTGCCCTTCATCAGATCCCAGAACTTCTTTTTAAGTTGGCCAGGCTCTGAGAACCAGCGTTGGGACCCACAGTCTGTCTATAGCCTGTGTTCACGACTGAGGAGTTCCTCCTGGAGTCTCCAGCGGCCTGTCCGTAGCTGAAGGAGAGCCCATGGTTCCGCTGCCTGGTAGTCCGGGGACAGGCCCTGTGATCACCGGGAGGGTCAGGAGCGCGTGCTTGTGTCTGTGAAGACAGCGCCATCCCTGTGGTGGTGGGCCGCTGGCCACCCTGAAGGACCCTCCCAGGAAGCGAGCATGGCTCCTCAGTGCGGCTGCTGCTCGCCCTGGGCACCTGAGGCACCCCGAGGCTTGGCGCTGGTGGTGGGTGGGCCTTCTGGTTCCGGGGCTCAGGCTCTTCCCCTGCCCTTGGGGCCGCCTGCCAGGCACTCAGCGGCTGGGCCTGAGGGGCCTGGGTGCCCCGCCAGCTCGGCTTTCCCTCCTGGAAGTGTCTCATTCAGCCACCTGACATCTCTCCCTGGCTCACTTAGGCCTCACTCTCCTTCTCACGCTCCCCGCCCTCCAACCTGACTCCTTTGATGTGGAATAGAATGACTGAAATGCACACATGAGTGGTCAGTGGGATCCTGTCCTCGGAGAGTTCCACAGGAGGGACATGCAGGTTCTGAAGTGCAGTGGTCTGTGGAACATACGCCGTAAATGGTAGGGAGACGGTTGGATGCGGACGTGAGTGAGGGTGGAGGTGGCTTCTGTTGCCTTAACTCATAGTTGCTCAGTGTCTGGAGGGCATGAGGATCCTTTCTTTTTTACATTGCTTGGATCTCAGACCTCTACCGTGTGATGTGTGCGTGTACATGTGTCCAGGTCCGTGTGGTGTCTGAGCGTGGCTGTCCCGTGTGTTAGCACCTCAGTTTGCTGCTGTGGTTTAGCCGGCAGCACCCCTGCGCCTCCCTGCAGTGTTTGCCCAGCCCCCGTGATTTCTGTCTGGTGTTGGGCACGTGCGGTGTGACATGCCCTGGAGCCCACATGCTGCTGGAGCGCTGGCATCAGCCCTGGGTCCTCCCTTTCTCTTTGATAGTGACCGCGCTTGTCTGCAGCAGCTGGGACCATGGCTGTTGCTGCACTTGGGCCTGGTTAGGAGCTTTCAGAAATGGGATGGGCATCTTTGGTAGGTTACTGTAACTGTAATGAATGCTTTACTCCCCGTTGACTCCCCCCAAATGCCTTAATTCTGTGTACTGTTTATCTCATTGGAGAGAAGAATTGATCACGTGGCATCTTTGTATATGCACTTTAGGTAGAGGAGTGGCTCTCCGGAGAGTTTCTCATCATTTACAGATGCAGAGAGGGGCATCTGTAAATGGGAGTCTACCCGGCTTCTCTTCACTGCTCCAGGGGGCCCCAGTGCTCCAGGGAGGCACTCATAGTGCTGCATAGGTTTAAACTGGGATGAGCCTGTTTCACTTAGTGGGTTTTAGTCTGAAGAGAAAGTGCCCCTAAAATGTCTGAAACACATGACTCTCCATTGTGGTGACACTGTCCCTACAGCGCTCTCTTGGGTGGGGAGGTGGTGGGGACTGTGTCATATGTGACTTATTTTGACAGTGGGAGGGTGAGTTGTGAAGCTTTGGGAATGAATGAACTAAATAAAGCATTTATTCATTTCTCCATGACTCCATGGCATGTCTCTGTATTTGCTATTAATATTTCAGATATTTCCTTCGTTCCTCACACCAGTCCCCAGGCCCATCTGTAGATGTACACCTCTCCTGCTCTGCTGAAAAACGGCCTCACTTTCTGTCTCAAAAACCAGCTGCCCATGTGGCAGGGATTGCTGGTTCTCCTTCACTATCCATTGTCTGCGTCTATGATAATAGAATCCACGGTTATAACTGGAGACTTGAATGCTCTGAATAAAGTCTTCACTTTCCAGAC EMBV3_34120 GTGGTGCCACAGTGCTGCTTTCTGCTACTTTGAATGGAAACGGCTGTGTATGTTGCAGGG Gene BVV0102_355564 + 0 NULL GK000003.2:1314967-1328185 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15291 AGGAACCAGGCGCCACCTACAAGCTGTGAAACTAGAACCTTCTCCACTAAGCGTTTTTAG Gene GeneID:530317|SOX8:XM_002697973:712_cdna Constitutive 0 NULL GeneID:530317 25 GENE SOX8 NULL SRY (sex determining region Y)-box 8 EMBV3_01115 TCTCTACCAAGCGATGCTTCTGACACCAGCTCTGACCATCACCAACACAGGAGCTTTGTC Gene BVT0101_076089 - 1 EMBV3_21125 GK000013.2:30123391-30340579 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044917 1 XLOC_026312 NonCoding TCONS_00044917 XLOC_026312 NonCoding NonCoding LOC100848562 13:30213500-30235488 = TSS32908 564 1 TCONS_00044917_2 97 2 0.974439441488152 0.000337730901070037 0.000552307753261322 0.000918836618094998 0.00270914913344076 8.75386428833549e-06 0.000101476951605138 2.067987107978e-05 0 0 0 0 0 0 0 8.69895083321415e-07 4.68290882165827e-05 0 0 0.00170373233122818 0.00272865601385494 0.000177622884303859 0 0 0.000208071805627713 0.000663365700077926 0 2.07771324558168e-05 0 0 0 XR_227489.1 LOC100848562 PREDICTED: Bos taurus uncharacterized LOC100848562 (LOC100848562), 0.0 798 100.00 0.781914893617021 0 noncoding 0 0 0 0 -0.357192897434485 0.0962517332905357 0.0348969451575951 0.580651335061101 ATGACGTCCTCCAGATTTCTAAGGTGGTGTGGAGCCCACGTGAGCCGTTTGCCAAGGGCTCCTGACTGTGAGCTCAACTCAACAAGATGCCGGCCGAGCGCGCCCGCTCCCGGAAGTGGAAGGGACAGACTCCCAGAAGCGGAAGCAGCTACAGGAGCTCGGGCTCCAGGAGACGCCTTGGGCCTCCTTCACCACTTCACCTCTCTATGCATTCATTTTTCAGTCTGTGAAAAGGATGATTTCAAAGCGCCTTTCCCATCTGTTTCCTACTCCTCTCACATGGAGCTGGTCTGAGGGAAGAGAAGTGAGCCTACTCGCTCTGGGCCAGAGGTCTGATTGCCTGAAGTGGTATAGAAGAGCTGGTGACAAGCTCCTGTGTTGGTGATGGTCAGAGCTGGTGTCAGAAGCATCGCTTGGTAGAGAAATATCTCTGCTTCCAGGCAGCCAGCTGGGAGTGAGAAGTGTTACATCAACATTCATTGACTTCTGAATCTCATCTCCTACCCTCTCAAAATCTCTCCTCAGGTTAGCTCATCTAATTAAAGAATGAATGTAGGAATCAAA EMBV3_23423 CGTCAAAAGTGTCCACGAAAATCAATGAGAGCCTGGGGAGAAAAACACTATTAACTGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33303 CAGGAGACTGGCAGGCTACTGTCCATGGGTCACAAGAGTTGGATACAACTTAGCGACTAA Gene BVV0102_408548 + 1 EMBV3_00427 GK000019.2:41123268-41141794 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39919 GGGGAGGGCTTTGGAAGGAGTTGGTTGATGCTTTTGCTTTTCCAACCCTATCGCCAACGT Gene GeneID:517354|LOC517354:XM_002694885:902_cdna Constitutive 0 NULL GeneID:517354 18 GENE LOC517354 NULL similar to fractalkine EMBV3_35013 GGAAGGGCAGGACATGCTGTACCAATCCCTGAAGCTCACTAACGGCATTTGGATTTTGGC Gene GeneID:282183|AP2B1:NM_001075125:185_cdna Constitutive 1 NULL GeneID:282183 19 GENE AP2B1 CLAPB1 adaptor-related protein complex 2, beta 1 subunit EMBV3_02604 CAGGAATGCTGAGTGAGGCAAATCTTAGCTGTCAAGAGGAGTTGGGGATGGGCAGTCTCT Gene BVV0101_064647 + 1 EMBV3_28341 GK000015.2:35671015-35693294 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00064275 1 XLOC_038999 NonCoding TCONS_00064275 XLOC_038999 NonCoding NonCoding - 15:35673723-35674248 - TSS48018 525 1 TCONS_00064275_1 38 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.95998468643721e-06 0 0.0013080007798478 0 4.77923984092577e-05 0 0 0 0 5.24231063430877e-05 9.57979419020373e-05 0.00034312555003083 0 1.11602795532773e-05 0 0 0 0 noncoding 0 0 0 0 0.143377627997418 0.208786089341214 0.0370408492891431 0.603391795028599 CCATTTTTATTAACATTTAAAGATTAATCAAATTTACATTAAATAAGTCTACTTATGTTATCATCTTTTCCAATTTCACATATTTTGAATTCCTGCAAACACACAAGAAAACATATCTTCTAATATGTTTGCTAGTCTTTCATTCAACCCCAAAGCACACAGCAGACGCTTCACAAATGTTTCTGAAACAAATGAGTTTAACATGGTAAAAACATATATTCCAATAAAAATAAAAGAATAAGGCATATTATACTATGCAAGGATCCATTGATTATGAAAAGAAAAGGGAGAATGACTTTGTTCAGAGCCCTTTGACAAAACAGAGACTGCCCATCCCCAACTCCTCTTGACAGCTAAGATTTGCCTCACTCAGCATTCCTGAAGGGTTTTCTGATCACTGACTCACATAGCCTGGCCTCTTTTTCTCCCACTTTCTCTCTCTGAAACCAGGTTCCCACTGGGAGAACTTGTTCTCTCTGCTGCTCCAAGCAGGACCATTTTCGCAAAGATTTGTCTCTTATGTGG TCONS_00061071 . 5' 2499 TCONS_00061071 . 5' 2499 EMBV3_28989 GATTGTGATTAGAGAACCTTGGACATTTTGCTGCTAAAGAATCTCCCCCCTCCTACCCTC Gene GeneID:520833|UBE4B:NM_001102504:76_cdna Constitutive 0 NULL GeneID:520833 16 GENE UBE4B MGC140002 ubiquitination factor E4B (UFD2 homolog, yeast) EMBV3_19299 CAGTGGGAAACCATACGCCACCTGCTCGAGAAGTCAGAGTTGTGGGGTTTGAAAACTGAA Gene GeneID:281973|PDE6A:NM_001001526:19_cdna Constitutive 0 NULL GeneID:281973 7 GENE PDE6A NULL phosphodiesterase 6A, cGMP-specific, rod, alpha EMBV3_39820 TATTATGCAAGTTTAAACAAACCAAGAAAACTTTCAGAAGCAAATTGATCCACGTGAGAG Gene GeneID:537376|RYR2:XM_002698813:47_cdna Constitutive 0 NULL GeneID:537376 28 GENE RYR2 NULL ryanodine receptor 2 (cardiac) EMBV3_06724 ACCACCCATCGAATGGTGTGTACACTTGCACTTTCATCCCAGCAGAGGGACCATAGCTTT Gene BVV0102_074149 + 0 NULL GK000019.2:51701269-51727247 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097664 TCONS_00097665 TCONS_00097666 1 XLOC_058306 Coding TCONS_00097666 XLOC_058306 Coding Coding LOC100848134 19:51717064-51724431 = TSS72316 2517 1 TCONS_00097666_3 287 0.0727056019070322 11 0.659788216128156 2.94748112296948e-11 2.18837208297709e-20 3.84825897339176e-05 1.88472085890682e-05 2.73061351080082e-07 1.61501118932116e-12 1.21230736917643e-39 0.000202854021276734 6.63474082283576e-10 8.60005742273497e-06 0.000142795653305609 0.000156249342207601 8.39718338802008e-05 2.72633066863455e-05 2.92995568970431e-06 0.00669372395059539 0.0022430043663203 0.0108634093314672 5.24037252032776e-18 9.2285953901013e-12 0.000119139515868065 0.00311686567200025 0.00195253097942698 0.00567970692152688 0.000138369686636249 7.82241081439339e-09 3.36726087560609e-09 0.00170416361437003 0.000619401847356639 0.00117153140911153 XM_003583631.2 SLC25A10 PREDICTED: Bos taurus solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10 (SLC25A10), 0.0 4168 100.00 0.917759237187127 NM_012140.4 SLC25A10 Homo sapiens solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10 (SLC25A10), transcript 0.0 1090 87.73 0.346046881207787 TCONS_00097666_3 sp|Q9UBX3|DIC_HUMAN DIC_HUMAN Mitochondrial dicarboxylate carrier; 0.0 548 90.59 0.996515679442509 1 coding GACCCACCCTCGGACTTGGGGGCGGGGTCTGCGAAACCCCGCCCGTTAGCTCCCGCCCCCGGGCCGCGCGGGTGCATTGGTTGTCGGCGGCGAGGGCGTCCGGCGAACCTTTGAACGCGCGGCGGGCGTCTACGAGGACCGGGCCGGGGTGGGGGCTGGAGCGGGGCCGGGCCAGCGTCTGGGTTTCACAGGCCGGGTCGGGGCCGGTACCTGCGCTCCTTGGCAGCGGCGGCGGCGGCGGCGGCGGCGCCCGGGCCATGGCGGATGAGGCGCGCGTGTCGCGCTGGTACTTCGGTGGGCTGGCGTCATGCGGGGCCGCCTGCTGCACGCACCCGCTGGACCTGCTCAAGGTGCACCTGCAGACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGCTGCAGGTGGTGCGCTCTGACGGCGTCCTGGCGCTCTACAACGGGCTGAGCGCCTCCCTGTGCAGACAGATGACCTACTCCCTGACTCGGTTTGCCATCTATGAGACCGTGCGGGACCAGGTGACCAAGGGCAGTGAGGGCCCCCTGCCCTTCTACAAGAAGGTCTTGCTGGGCTCCATCAGCGGTTGCATCGGCGGCTTTGTGGGGACCCCTGCGGACATGGTCAACGTCAGGATGCAGAATGACATGAAGCTGCCCCAGAATCAGCGCCGAAACTATGCCCACGCCCTGGACGGCCTGTACCGTGTGGCCCGAGAAGAGGGTCTGAAGAAGCTGTTCTCAGGTGCAACCATGGCGTCCAGTCGAGGGATGTTGGTCACCGTGGGCCAGCTGTCCTGCTATGATCAAGCCAAGCAGCTGGTCCTCAGCACGGGCTACTTGTCTGACAGCATCTTCACTCACTTTATCGCCAGCTTCATAGCGGGTGGATGTGCCACATTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGGCTGATGAATGCCAAGGGCGAGTATCGGGGTGTTCTGCACTGCGCCATGGAGACAGCAAAGCTGGGGCCGCTGGCCTTTTACAAGGGCCTCGTGCCTGCCGGTATCCGCCTCATGCCCCACACCGTGCTTACGTTCGTGTTTCTGGAACAGCTTCGCAAGCACTTTGGCATCAAAGTGCCGTCCTGATGTGGCGGTGGGAGCAGCTGGGTCACGCCCAGCCCCCTGCGCCAGTTTATTCCAGAGTGCCAGAGGGCTGGCAGCTGAGCCCTGCCCTGAGCCCAGCCCCTGCCCACTGTGTTCCAGCCCCCTCCTGCCGGGCCCAGGACCCCCACCCCAGCCTGCCTGGCCAGCCCAGTGACCGTTGTCCCCTCCGAGCTGCTGACTTCACCTCCACCTCCCGCTGCCACCACTGACTCTCCCTATGTGGTGTCCAGCAGCGCCCTGTGCACAGCAGTGACTCTCAGAGGGTGTAGGCCCCGGGTTGGGTGTTCTGTCCCCAGGTAGGCAGTTAACCCTGGAGTTGGGAGGGGTGGGCTGGCCAGACTTTTACAGTCTGGGGTCTCCAGTCCCTGAAGTCTCTTCCTTTCACGAAGCCCAGGACCCCCAGCAGCTCCCACTGAGGACCCGGGTGGTGGAGTGGGGGGTGTGAACCCCCAGCACCACCCATCGAATGGTGCGTACACTTGCACTTTCATCCCAGCAGAGGGACCATAGCTTTCATGATGTTCTTTAAGACAGCTGCGCCCCACAGCTGCCAGGTCAGGGCAGAATGAGTACCCAGGAGGAAGGGCCTGCGTGTGACCCTCAGGCACCCCACCCACCCCTCCTGGTCCAGCCCACCCCCACTGGCTTTAACAAGTGAAAGTGAAAGTCGCTCAGTCATGTCCAACTCTTTGCGACCCCACGGACTGTCCAGTCCATGGAATTCTCCAGGCCAGAATGCCGGAGTGGGTAACCGTTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCAGGTCTTCTGCATTGCAGGCATATTCTTTACCAGCTGAGCCACCAGGGAAGCCCAGCTTTAAACAATTAGTTTCACCAAAACCTTTCAGCTCCAGGAGGCGGCTTCTGTCTTCGGGGCTGTGCAGCGACCCCTCCTGGCTCCCTGAGCAGGAGCGGCACGTCCACGGGGCTGACTGCACAGTGGTCACCTGCAAGGTCTCCAGGAGCCGGTCAGCCAAAATGCCCAAAGCAGCCTGCAGATGAGGCTGGGGGCTGCATCTGTCGGCCTCCCCCAGTCACGTGGGCACTGTGCCACTACCCCGCACCCCAGCAAGTGGCCAGCAGTCCCACATTGCCCTGCAGGGATGTTAATAAAGGACGGTGAAGTGCTGAGTCTGGTTCTGCATCCAGGCCCCTAACTAGTCTGCCTCGCGGTCAGGGCCTATGAGATCCTCCTTTGCACCTTCCAAAGAGGGCTCTAGGGTTTATGGAGGGGCAGGGTCCAAAGCAGGGGAGAAGCCACAGCTCTGACTGGATACACTGGGATGGCCTGTGGGCAGAGGGCTGGGGGAAGAGCGGGGCATGGGGCTGGTTGAGGGACTCA EMBV3_07800 TCGTCTGCAGCCAATCCAGAAGGAAATAATGCAGGAGCAAAACTTCACCATGGGGGACAC Gene GeneID:100337470|LOC100337470:XM_002689537:196_cdna Constitutive 0 NULL GeneID:100337470 8 GENE LOC100337470 NULL interferon beta-3-like EMBV3_17488 AATCAATTCTTCAGTCACTCAGATGTCAAGGTTATCTCATGCCCTCCCCACACCCCCACG Gene BVV0102_134218 + 1 EMBV3_40362 GK000021.2:67431510-67457236 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22430 TGGATGCCATTGAGGTCATGAGAAACCACTGGTGCTCTTACCTTGGGCAGGATATCGCAG Gene GeneID:508902|USP28:XM_002692994:165_cdna UTR3_Alt 3 NULL GeneID:508902 15 GENE USP28 NULL ubiquitin specific peptidase 28 EMBV3_02646 AAGGAGCAACGTGAAGGGCAAGCGTGTTTGTGGTCATGGTGCCACAGTAAACACCAGTGT Gene GeneID:534383|FBXO18:NM_001099063:16_cdna UTR3_Alt 2 NULL GeneID:534383 13 GENE FBXO18 MGC157095 F-box protein, helicase, 18 EMBV3_26312 TAGCTGTCTTCCTCAATCATTCTGTAATCGAAATTACTTGGGTCTGTGCTCCCAAGGACC Gene BVV0102_149442 + 0 NULL GK000030.2:20424552-20456004 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246546 TCONS_00246547 TCONS_00246548 TCONS_00246542 TCONS_00246545 TCONS_00246543 TCONS_00246544 1 XLOC_151017 Coding TCONS_00246545 XLOC_151017 Coding Coding RBMX X:20453927-20462782 j TSS184809 5929 4 TCONS_00246545_2 161 0.0310339011637713 8 0.331262706121527 5.29465802843111e-111 4.62354121668373e-06 8.25383642163077e-28 1.00909665235823e-45 4.30237749663932e-30 4.52394945379336e-32 2.33757629857617e-35 3.8969493914444e-06 4.91935321063881e-05 0.00134947352107174 0.000111138229024082 0.000214947679970513 0.000221787843274839 0.000919603291197007 3.2972296444958e-05 0.00403921081231916 0.0105212879446715 0.00618583311366612 9.30022198796625e-16 1.88562602176378e-20 1.73915849939837e-29 0.00408611882701229 0.00238077457670865 0.00219020073118814 8.41858561003908e-19 2.04036455369639e-23 3.43722897960419e-16 0.000789120032906594 0.000242437965125869 0.00110544568384719 XM_005227540.1 RBMX PREDICTED: Bos taurus RNA binding motif protein, X-linked (RBMX), 0.0 2875 100.00 0.268679372575476 NM_019610.5 RBMXL1 Homo sapiens RNA binding motif protein, X-linked-like 1 (RBMXL1), 0.0 1673 90.73 0.206611570247934 TCONS_00246545_2 sp|P38159|RBMX_HUMAN RBMX_HUMAN RNA-binding motif protein, X chromosome; 4e-94 282 99.35 0.956521739130435 3 noncoding 0 0 0 1 1.71756630338012 0.0148144166172991 -0.00893555740581943 0.854015453137326 CTCCTTTGTTCGCCCTCGTTGCGCAGTAGTGCGAGCGCCTTACAGCTTCCGTTCTGAGGATCGGCTGTCCTCCCGCGTGCCGAGCTGCTAGGAAGCCGCTGTTGGCGAGCTCGCAGGAGCTTGAGACCGTCGTCACCTCTCCAATTTTAACCAGGGGGGGAAAATGGTTGAGGCAGATCGCCCAGGAAAGCTCTTTATCGGTGGCCTCAATACAGAAACCAATGAGAAAGCCCTTGAAGCAGTATTTGGCAAATATGGACGAATAGTGGAAGTTCTCTTGATGAAAGATCGTGAAACCAACAAATCTAGAGGATTTGCTTTTGTCACCTTTGAAAGCCCAGCAGATGCTAAGGATGCAGCCAGAGACATGAATGGAAAGTCCTTAGATGGAAAAGCCATCAAGGTAGAACAAGCCACTAAACCGTCATTTGAAAGTGGTAGACGTGGACCACCTCCACCTCCAAGAAGCAGAGGCCCTCCCAGAGGCCTTCGGGGAGGAAGAGGAGGAAGTGGAGGAACCAGGGGACCTCCATCCCATGGAGGGCACATGGGTAATGACTTAAGTTTGATTTAGGCTTGGTATATAAATTAAGAACTGTAAATACATCAGTGTGTACTTTGGTTAATCTTTATTTTAAAGGCCTTAGCTTTTGAAATTGAGAACATTTTATTCATCTACCAAAGTGATTTCCTTAAGGGAAATATAGAAGGCATACTCAGTTAAATTAACAATGCCTTGAAATAATTAACAGTAAGCTATTATTTATCCAGATGAACTCATTCTATAGGGAAAAACAGTTATAGAAAAATTTTGATAGGTATTAAATAACTTGGGGGTTTTTTTTGAAGTAATTTGAACCCTCAGTAGAACCCTTCAGTTCTACTTTTCTGATCTATACTAACTCGTGTGTCTATATAGACTAACACGTCTCACAGTCTCTATATAGACTTAACAACTAAAGATTCCCCCCCCCAAACAGAAATGGTCTTGTTCTTGATCAAGCAAAACTTTTGTAGCTTTTTCATGTATTAACATGATTTTTTTTGTTCTAATGTAGATGATGGTGGCTATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTTCCGGTAAAAAGAGGACCACCACCACGAAGTGGGGGTCCTCCTCCTAAAAGATCTGCCCCTTCAGGACCAGTTCGAAGCAGCAGTGGAATGGGAGGAAGAGCTCCTGTATCACGTGGAAGAGATAGTTATGGAGGTCCACCTCGAAGGGAGCCCTTGCCCTCTCGTAGAGATGTTTATTTGTCCCCAAGAGATGATGGATATTCTACTAAAGACAGCTATTCAAGCAGAGATTACCCAAGTTCTCGTGATACAAGAGATTATGCACCACCACCAAGAGATTATACTTACCGTGATTATGGTCATTCCAGTTCACGTGATGACTATCCATCAAGAGGCTATAGTGATAGAGATGGCTATGGTCGTGATCGTGACTATTCAGATCATCCAAGTGGAGGTTCCTACAGAGATTCATATGAGAGTTATGGTAAGATTTTGGTTGAGGGTCTCTGACTATCACCAGCTTGAGTTTTTAGGTTCATGAGCCAGTTTATTAGGCTGTTGTGGTGCTTGCTTTTAAAGGGATGTTTGCTTGCTTTTAAGGGGGTAATTTATTCAGCTGGGCTTTTCCTAGTCTTGTGAGGGGCTTTTGTTTTTTCTAAGTTTTTTTTGAGGCTGTTGGCTTGCTTTGGAGGGGATTTTGCTTGCTTAAATTGGCAGCCTTATGTGTTTTCCCCCAACAGTGAAAATACAATTTAAAAACTTTATTAACAAGATCAAATGTTTACCATTGCAATATGAAGGAAAGTCTACAGTTCAAAATTGCAACTTATCACTGGAAAGTTGGCTGAGTGTCTACTATAAAATAACAAGCTGTCTGGAATATCCTCTTGAAATACACACCGTCTTCAGTCTTTTCAAACAAACATTAAAACCCACCCATTTCCGTGTCTCAGCAGATGAGCAAATCCCTGTTAATGGCCAGCAATGGCAGAGTTTAAAACCTCCCAGTTAAGACAGTAAACGTTTAATACAAGAATTCTGTAAATTCAGATTTAAATGTTGTATATATACAATTTATAGTGTTGCCATATTACCTGACCATTGACCCTGCAGGTAACTCACGTAGTGCTCCACCTACACGAGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGGTGGAAGTCGAGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGGGTTGGCAGACAAGAAAGAGGGCTTCCCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGAGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAGGTGGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATATTAAAAACAAACAACTTGGACCAAAATCCCTGTTCAAAGAAACAAACAAAAGTGGAACCTGTTCTATCATAACTACCCAAGGACTACTAAAAGGAAAGATTGTGTTACTTTTTTTAAATTTCCTGTTAAGTTCCCTTTCCATAATTTTTATGTTCTTGTGAGGAAAGAAAGTAAAACATGTTTAATCTTTGATTTTATGACATTGCTTTCAACAAGCAAATGAAATGTTAAGTGTGTTAAGACTTGACATGTGTACTAGTGGTGTAATCTCCAAGTAAAAGTGTCCCTAAAGGCCACTTCCTATAGGATTTTCCCCAGTAAATGATGAGGCAAGCAGTTTATCTTACACAAAATATCTAGTCATCTAAAATGGAGAGATGAATCCTCCTGCCTATATAAACAAGCTAGCTATTAGAGGGTGGTCGGGGTATGCTACTCTTAGGATTTCAGAGTGTCTTCAAACTGAAATCTCAAATGTTCTCAGTATGAAAAACCTGAGATCAGATGCATATATGTAAGGAAAGTGCTATTCGCCCAGTAAACCCAGAAAAAAGCAAATGGATAATGCTGGCCATATTTTGCCTTTCTGACATTTCCTTGGGAATCTACAAGAACCTCCCCTTTCCCCCTCCCCAATAAGACCATTTAAGTGTGTGTTAAGCAACTACAGAATACTAAATAAAAAGTTTGGCCAAAACCAACCATGAAGCTGCAAACGATGCTTGCTCTTACTGTTTCAAATTTTTGCAACTCTGTAGTGTCTCACTTTTAAGGAACAGCTTGATTGCAAAGGAGAAAATAGATAAGCAATGAAGTTATCTCCAACTTCTCAAAGGCTTATGACTTCTAAAAAGTGAATCTATCAGCATTCCACATCAGATTTAAAGCATCAAATGCCTGTGAAACAGCAAAGATGGTAAGCAAAGCAAACTAGTTTTTCCGTCTAAGTCGAAATTGAACACTTACCTTCCTCATAGTACAGTGAAACATACTGTACCTCATGGCAATGGAAATGCTTTCTAGATTAAAAAAAAAAAAAACTTTTGGAAAACAAAGTGTTCGATAGCATATTAGAAGTCCTCCAAATTCAACACTTGGATTTCTTTTTTTAAAGCATGTGTGACACTTAAAGGCCCTAATACAGCTGTTTACCAGTAGCGATCTGGGGCTTGGGAGGGGGTATTTTTTAAATCTTATTTTTGATGAAGACCTTTAAACATGCTTCATGTTTTAACGTTTTTCAAATTAGTCTTTTAGTCAATATAGGAAATGGCTTAAGTTTGGGGTCCCCCTCTCTTTACCCCCTGTAAGCCATTGCAAACCTGACATTTAGTTGGATGCCTGACTTGTTTTTAGTTCTGTGAAACTACACTCTATGGAGAAAATCTATTGCAAGTGGTCTTTAAAAAGCAAAACCTGAGGCAGCATGACCCAGGTCCAGCCATGAAGTTGAAAAAGATGCTCTTGAATATAGTAAACTTGAAGACCTCCAACTAAAAATCCTTACACTGCACTTAATTCCTTCAAATAAGTTTTGTCCGTTCAACTTATGGATTTAACATGGCAGTGCACCATTGGAACAGAATGGGAATCCATAAGCCATGCAACTTAACCATTTAAGCCATTCCAGTCCATCCCAAGCCAGTGAAGCTTCCACCACTTAAGAGAAATAGTAGAACACGAAATACGTTAAGCTGCAAGTCTGAACTTGCCTTTTCTTTCTGGAAAAGAGGGCAGTTATAGGCAAGTTTTGAAGAATTTCCTTAAGAGAGATAACTAGTTACCTATTTAATTTTTACAGGTTGAGAATTTTGGTCATGGTCATGATGGTCATGGAGTGCTGATTTTTTTCACACTAGATAAAGCTGGCAACAAGAGAAATGCAATGCTAAGAGCTGTTGAAGCAGAAGAATTGCTGATTGTCCTTAAGGCACAACAGTTGCATAAGCAGTACTCATCAGAATTGGTTTGGTGCAGACAAGATTTTTGCCTTCCAGGTTTCCCGTGGCTCTAAGGAAGGCATCAACCCCAGTTGGTTAGCACTCTTAACTAGGGAGTGGCAGTTTCTTAAAATAAGTAATTGACAAGATGGAGAAAGGGGAGTAATTAAGGAAATGGGTAAGTGGAGGTAGTCAGGAAGTTCTTGTGGTTTCTTTTTTCAGCTTTGACTTTACTTTAGCTAAAGTCATAGAAGTGACGTGAAAGTTGCTCAGTCCTATCCAACTCTTTGTGACCCCATGGACTATACAGTCCGTGGAATTCTCCAGGCCAGAATACTGGAGTGGGTAGCCTTTGCCATCTCCAGGGGATCTTCCCAACCCAGGGATCGAACCCAGGTCTCCCGCATTGCAGGCAGATTTTTGACCAGCTGAGCCACCAGGGAAGCCCAAAGTCATAGGGACAACTGCAACTTAGAACTTCCTAATTACCACTGGTTGTCAGAAAGTTGGATTAGAAAACTGAAAGGCATAAGAGGTAACTTTATCCAGTAAAGTGATTTTTCAGCAAGTAAAATATTTCCTTGTGTTTATCCAAAAGTGAGATTTAGTCTTAAAACTAAATGGAAGACTAATATCTGGAAACTAAAGTAACTGGAAACAGCTGAAATGCTCGAAAGCACACGTTGAAAACTGGAGACAAAATTGGGCCGGTTGGCTTTTGCTGTTTTTTGTTTTTTTGTTTTTTTGTTTTTTTTTTAAAGAATAGTTGTTTTGTAAGCTTCCTTTACCCCCTACCCCAGTTCATGTCTTGCAAACAAATCGTTACAGCTTTATCATTTATTGCATTGAAGATTAGAGCCAATGGTGTAAAAGCTAATGTTCTCAAAGGAAACAGATTTGAGTTGTTGGGTTAGAAGGAACCAACTCACCTTCTGAATGTTTACCTAGTAAATATCAGTACTGTCATGTTTACCGTTTGCAGTTGTGGAAAATATGCAGAAATGTAACCCTCATTTTGACAGGCTCTTCCAATCACAGATCATGAGGGTATTGACCAAATTTAAAAAGCCATTGCACTTACATAGCTGTCTTCCTCAATCATTCTGTAATCGAAATTACTTGGGTCTGTGCTCCCAAGGACCTTTTGGCTCTTGAGATTTTATTTAGGTATCTTGAAGATAGTGTAGAACATAGAGACTAACCATAGTAAAACCAATACTAAATTGAATGTTTAATGACCAGACAGCTATTTGGCAAATAGTTTACTGACCCAGCAGACTTATTTCTGCTCCTGTTGGGAAAAGAATTGGTCTTGATTTATACTGGTTGTAAAAGAAACAGAATAACGTGTTTTCTTCGTTTAACTGGTAGTTGAATATAGTACTTAGATACAATAGATGGCTTTTCTCTTTTTGGAATGTTTTGTATTTGAACCTAATAAAACTTGACGTGCATTTTTTGTGGCTCTGGGGTCTTTATTATAAAAAAGGGTTTTATTTTGGCTTTTAATTAAGGATC EMBV3_38013 GAGTCATACCTGGGATAGGCTGAGAGTTTTTGGCATTCTTCCCTGTCCTTTGTATGCTAG Gene BVV0102_018140 + 1 EMBV3_05017 GK000008.2:25191192-25197699 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224748 TCONS_00224750 TCONS_00224747 1 XLOC_137626 Coding TCONS_00224747 XLOC_137626 Coding Coding HAUS6 8:25149917-25194514 j TSS168472 6640 1 TCONS_00224747_5 956 0.160843373493976 17 0.851488922773343 0.000180397332308326 5.93315522161357e-05 0.000185204261855967 0.000135532297818312 0.000173152061406683 0.000158367607551957 0.000101448778988546 0.000328514922839055 0.00043391235849236 4.68158762562119e-05 2.66476230518542e-10 3.52229164766564e-05 2.30791520086427e-05 0.000140115540376768 3.2586286478195e-05 0.00300647558729212 0.000854817762297518 0.00214608521219111 8.74141762358967e-05 5.40169867374027e-05 5.43913313033982e-05 0.00129519748372445 0.000954979643391436 0.00140695400158617 0.000386676619363577 1.63477305537221e-08 0.00020494263154251 0.000166378590742066 0.000189992749723323 8.00392943437583e-05 XM_002689566.3 HAUS6 PREDICTED: Bos taurus HAUS augmin-like complex, subunit 6 (HAUS6), 0.0 5791 100.00 0.483433734939759 NM_017645.4 HAUS6 Homo sapiens HAUS augmin-like complex, subunit 6 (HAUS6), 0.0 3772 80.21 0.609789156626506 TCONS_00224747_5 sp|Q7Z4H7|HAUS6_HUMAN HAUS6_HUMAN HAUS augmin-like complex subunit 6; 0.0 1415 75.05 0.998953974895398 1 noncoding 0 0 0 0 -0.16954295904718 0.25232442570853 -0.00714157751733104 0.924778070654278 TTGCGCGGAAAAGACCGAGGGGAGGGCGCATTGCATGGCGGGAGATATAATCCTCCCAGGAAGGCTGTCTTCCCTCGGCACCCGGGCGGCGTCTTCCGGAAGCGCGGGACGCTCGGTTTGTGGTGTCTTCGCTCTGGCCGCTGTGCGGTACTACAGTTAGAGGTTCTATTTGCCTGAAACTTTAGAATTTCAGGCTACTTGAGGCCATTTGAGGCGAAATGGCTCCGAACGAGAGAGGATTAAGTGGTGGCAGTTGAGGGGCCGCCGCCACTTTAGGCTGCCCGTAGGGAAGAAGTCTGAGGGGCCCTCTAGACCTTGGAGCCTGTGCTTTCTTCATTTGCCGGGCCCTGCCTACCGCGAAGATGAGCTCGGCCTGGGTCACTTCTTTCGAAAAGGCGCGTCTGTGGATGTACCTGCAGGCGCTCGGCTTCGAGCCTTGTCTGGCGACCATAGCCTGTGGAAATACCGTGTCACACACGCAGTTCGGAGTGAACATGTTTGACAAGCTGAACCGTGATGCCTTTCATATAGTTTCTTATTTTTTGTTTCAAACACTTGACAAGTCTCTCACCAAAGAAGTTTTCAAACATTGTTGGCCTCCATTTGATCAAAAACGTGATGTTGAATTCCGAAAACTTTTCTGTGAATGGTTAAAAAAGATTTCTGCCGAATGTGGAAGTAGCTTTCCTCAAGTTGTTGGTTCACTATTTCTATTTCCAGTTGGTCCTAAGTTTATTCATATAATGTATCACTTTGCAAGATTTGTTGCAGTAAAATATATAAAAACCCATTCTAAAAATTCTTCTATACGTTTTACAGAGACATTTAATGTTAAACCACAAGATTTGCACATATGCCTTGCCAGATGCCTTGTAGCACGTAATAGATTTTTACAAGTTTTGCAAAGAGAAGATTGTGTTACCCGAAAATATCAAGAAAATGCACAATTGTCAGTTAAACAGGTACGAAATTTGAGATCAGAATGTATGGGACTGGAAAACCAAATAAAAAAAATGGAACCCTGTGATGACCAAAGTAATATACAAGAGAAAATTCAAAAGGTTCGGTCTTTGTGGACTAACGTGAATGAAACACTTATGTTTTTGGAAAAAGAGAGAGAAGTTGTTAGTTCAGTCCTTAGTCTTGATAACAATTATACTTTAGATGGAACTGACATTGCTATCAATATTCCAAGCCTCTTACTTGATAAAATTGAGAAACAAATGTGTCAGTTGCACACAGGAAATATTTATGAGGCTGGAAAATTGAACATCTTAACAGTTTTTTGGTTATTAAATGAAGTCTTGAAAGTAATGAAATGTGAATGTTGTCAAACTGACCAAGCAAGACTGACAATAGACCTTCACTTCCTTGAAAAAGAGACCAGATTTCAGAAAGAAAGACTGTCAGATCTGAAGCATATGAGGTATAAAATAACAGAAGCTCTCAAAACTATAAGACATTCTATTGTTGAAAAGCAAGAAGAATGGCATAAAAAGTGGAAAGAGTTTCTTGGCTTGTCTCCTTTCAGTATAATTAAGGGTTCTACTCCAGCTGTGGATCTTTTACCGCCTATGTCTCCACTTTCGTTTGATCCTGCCTCAGAAGAAGCATATGCGAGGAGCATTCTTTTACAGTATCCTGCTTCACTTCCAGTTACACCTAAGCAACATATCCAGGAAAATAATTGCAGAAGAGCAAGTGATACACTGGAAACTAAATCTGATCCACCCAACAGCCCTGCTTCTTTCCCGTTACAGCCAGTTCCACCATTAGGTGGAGACATTGTTACATTACTTGAAAAGGACACGAAGTTGGTAACTCTTAGAGAGAAAAATGAAACAGTTCCTAAGAAAACACCAGAATTTAATGTAGAAAACTCTTCATCATCAAATATTGTAAAGAATACAGATAGTAGTGCGTGTGGAGGGTCTCTGCCAGCTAAAAAAAGCAATCCATTCCAGAAGGAGCAAGATCATCTGGTAGAAGAGGTCGCAAGGGCAGTTTTATCTAATTCACCACAGCTCTCTGAAGAAAAAGAAGTAAAATTAGAGGAACTAATTGACTCTCTAATTTCTAACCCATTCTTAACAAGGAGTCAAATTCCCCGAACTCCAGAAAACTTGATAAGTGAAATTCGGAGCTCATGGAGAAAAGCTGTTGATACAGAAGATAACAGAAGTACAGAACCAATTCAAGTGGATACTGAACGTAGAGAAGAATTGCCAGAATCCTTACCTGTGGTGCATAATCAAAAAGAGTTTAGCATGGCCAGTTTCTTGTCAGCAGCCACTGTGTCCAATTCTAGTCATTCTCATCTGCCTGAAGAGAAAGTTGTTTCAGATTGCCTCGAGTGTGTGCCTCAGAAACCCGTGGTGACCACTTGCATAGGTGAACCAACAACACAAAATCCATCAGATTTGTTAAATAAGGACATAATTTGTATGCAAGATTTGGACTGTACAACTTTACAGAACAAACTTTTAGAAACTAGCCAAATAGAGACATTTTCCCCTGCTGTAGGCAATAGAAGAAATGTGTTAGGTAGCAGTGAAGAAGATAATATTAAAATATCAGACCAATCAAAAGCTTCTTACAAAGACTTTTCCATGTATAACAGTATGTTATGGAACTGTTTTCAGGTATCAAGTGAAATTAGTTCCAGTTTTAAAGATGGTGATTTTGGCATATTACATGAAACTCTTCCAGAAGTTGGTCACATAAGTCTTATTAGCCCCAGTAGTACAGAGGCCACTTTTAACCTGGAACCAAATAGTCCTATGCACAGTGGCATTTTCACAGAAGATGTTGTGGGAGAAAAACAGACTACTCCAGAATCAGACTTCAATTTACAGGCTACTTGCAGTGGATATGAGGCTCTGAAGAAATCTCCATCCAAGCAAAGGGAAGAAATTTACCTCTCTAATCCTGAAATACTTGAAAGACACAAACCAGAATTGAGCCTTACTCCACAAAAGATGCAGACTGATGATATGCTTAATTTTTTGGGCATTCATGATTTGCATATTGACTATACAAAACCATCTTCACGCATGTCCCTTGGTGAAAGAAAACGGTCTCTTTCACCACTAATTAAGTTTTCTCCAGTGGAACAAAGATTGAAGACCACAATACCATGTAGCCTTGGAGAACTTCTATCTAATTTAACAGAAGAAGAAATCTTGAATAAGAGCCTTGATGCAGAAGTATCTCCATCTGACTCAACAAGATGAAGCAGTAGCCCAGTCAGTTTAACTGTGATGCACTTAATTTGAAGCAGTGACATAAAATAAAAACTAATTTGCAGTTTAAATACACATGGGAAGTGTAACTGTTTTTCAAAGTCTAAAAAAGTCTTAAATAATGCCTGTTAGCCTTTTCTACTGTTTTTAGGTAAGGAGAATATGTTTGGATTTTCTTGCTTTGTATGGATAGGGGGTTGAACTGTGAAGTATTGGAAAGCAACTGTGAAGCCATTTTGGTTTCTTTCTTGAGATTCTTTATCATTTGAGCTACCCAGGAAGCCAGAGTAATATTGTAAGCATGAAGTAAATGACAAGGTAGTAGGCTAATTTATTATGTCCTAATTCAGTTAATTAACATAAAGATGAGTAGTTTTTGATGTAATTTTATCAAGTGGTTTACTTAATAGCTATTAGATATATGATTTTTCTTTTTAGGGAAATAACTTCTATTAAGTGAGGAGAGTAATGTATTGTAAAAATGACAAAGTTTAAGTTTGGGAAAGCTCTAAAGAGGCTTAATGATTATTCAAGTAGGTTGGTCCTGAAAAATGATGTTTGATAGAATAAAGTGCCTGTGATGATAGTGAAGACTGGGGTAGAAAGAAAAAAGTGGAAGATGACTAGATATTTTTGAGGGACAATAACTATAAATCCATTCAGTGGATTGTATAGCAGTTTTATGTTTAGACTAATTTAGACTTTGAGAATTTAACTCTAGTGTTTTATTTGAACAGAAAAAAATAAATTAGTCTGTATTTTTTGTTGGAGGGGCACTACTTTTGGGGGAGCTAATTTGTATTGCTACTTTCCTCCTCAGAAACCATCAGTTCCCCAACTGCCTATAGAACAGCTTCAAATTAACTTGAAAAAACTGAATTTGGGGTTAAATAACTTGTTCAGTGTTACACAGCTAAGTCGGTGATGAAGCTAGGGTTTAACGCTATTTTCCTTCCTTAATAAACCAACAAGACCTCAGAACTAAAAGGCCAAGGTGTAGGATATGGCTGCAGGAGTGGGCTTTCTGGACTCTAAATGGGAGTCAGATGTGAGGTCTCTTGTATAGTGTCCTGCCTGATTTAGTCAGGCCTCCCAGCCAAGAGAAAGGCTTGTCTTTAGCATTCAGGTGAATACATGCCATTACCCTCTGTGAACCAGGAGGTTAAGTACATGCTGGAAGGGTTATAGCACCTACAGCACCCCTGTGTCTAATGCCAGCTCTTAACCATCGCAGCTTTGTCCATTTGCCAAGAAACTGGCCAGAAGAGGAGAAAAGTTGAAGGAGAGAGTTCTGGAAGTAGATGGGCTTAATAGTTCATCTTTCATGACTCATTTTGGCTTATTTTCTTTTGTGTTGCTTGTTTGATCCAAGTTTGAAGGCCAGGCATGTGTGTGTGGGTGTGTGTGAGAAAAGACATAAGAAAAACACATATAATTACTCTATTAGCAGTGGAAAAGAAAGTGGAAGAGAAAAGCTTCTCCTCAGGTGGCATATTCTTTTATTAGTTAATAGAACAAATAGGGATTCTGCAGGTCTACAAGGAAACTGTTCTTTAGTCTTAAGAAACCCAGTACTGGTAAGCTCAAAATTAATATGTTAAGGAGAAGGTGCAGCTCTCATACTAGCATCTACAAATTGCCAGGGCCATTCCTAGATACTTAATATGTGTGCATGTTAAGTTGCTTCAGTCATATCCAACTCCTGGTGACCCCATGGACTGTAGCCCACCAGGCTTCTCTGTCCATGGGATTCTCCAGGCAGGAATACTGGAGTGGATTGCCATTCCCTCCTCCAGGGGATCTTCCCCACCCAGGGATTGAACCCGAGTCTCTCACGTCTCCTGGATTGGCAAGTGGGTTCTTTACCACTAGCACCACTTGGGAAACCCATATACTTAATAATATGTATTAGATACTTAATAATACAAATTTTATCAATTAATTCTTAAACCTCTGTAAGATAGTGATATTGTACCTATTTTATAGATAATGATACCAAAGCTAGGGACCTTCTTTAAATGACTTGTCTAAGATGGACTCAAGAAATTACCTGGGATACATCTTAAAAAATGTGGATTCTGTAGGTCTAAAATGAGGATTAGAAATTTCTACTTTTAAATATGCTTCCCTGGTAATTGTTAGGCTTAATAAGAAACTTGAGAGTCAGTGCCAGGGGATATAATTTGCCTTTAGTCCTGGGGTTTCTTAAAGAAGCTAGGTACACTATTCACACCATACTGCTTTATAGATCTTAGCTGTTTGATAAGGAAACTGTTTGGCAGAAAGTGAAAAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAGCATTCAGAAAACTAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAAATGGGGAAACAATGGAAACAGTGACCGACTTTATTTTTTTGGGCTCCAGAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTGCTCCTTGGAAGAAAAGTTATGACCAACCTAGATAGCATATTAAAAAGCATACTACTTTGCCAACAAAGGTCTGTCTAGTCAAAGCTATGGTTTTTCCAGTGGTCATGGATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTGCCTTGGACTGCAAGGAGATCCAGCCAGTCCATCCTAAAAGATCAGTCCTGAATATTCATTGGAAGGACTTGATGCTAAGCTGAAACTCCAGTACTTTGGCCGCCTGATGTGAAGAGCTGACTCATTGGAACAGATCCTGATTCTGGGAAAGATTGAAGGTGGGAGGAGATGGGGATGACAGAGGATGAGGTGGTTGGATGGCATCACCGACTCAATGAACATGAGTTTGAGTAGGCTCCTAGAGCTGGTGATGGACAGGGAAGCCTGGCGTGCTGCATGCAGTCTTTGAGATTGCAAAGGCTCGGACACGACTGCGTGACTGAACTGAACTGAACTGAATGGAAGCTGAAGCTTACAATAAGTGTAGGCCCTCAATTGCTGAGAATCTGAAGATCAAAATATCTCTAGATATTAATGGATTTACAAAAACCACATTGTTAAATGAGTCATACCTGGGATAGGCTGAGAGTTTTTGGCATTCTTCCCTGTCCTTTGTATGCTAGTTGTATAAACAAAAGTATATTAAATCTGTCACTTTCTTGTAAACCATTTTGATTATGACTTATTGCTTTTAAGTCTCTTCCTTGTTTGTTATTGCCTGCATACATGCCTTTTGTCCTTAAGGGACTGCTTTGATCATACCATTTTGTTTAAAATGGAAAAACCACTGGAAAAACCATTAAAATGGTAATTCTAGAATT EMBV3_15764 GCTTAAAGCAGTCCCTGTGGTCTGCCAATTCTGAAATCAGCCTGGCTAAATGTGTCCTCG Gene BVT0102_251727 + 1 EMBV3_33629 GK000002.2:18693728-18759168 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104571 TCONS_00104570 1 XLOC_062409 Coding TCONS_00104571 XLOC_062409 Coding Coding RBM45 2:18752421-18776379 j TSS77394 2437 1 TCONS_00104571_3 474 0.0767336889618383 11 0.898735233960847 0.000624761894998519 0.000301042372734763 0.000384333986949121 0.000188820484330235 0.000529843940071866 4.85275214378962e-05 0.000241472477897175 0.000129068751963148 0.000125752489248413 0.000139599236926429 5.64783565044276e-05 0.000165582495699216 3.77272650294257e-05 9.85042338037132e-05 4.00147419852915e-06 0.00162854159550887 0.00148723449465055 0.000976800883847464 0.000816566506938538 0.00108849382466033 0.000523351053524279 7.82753395595149e-05 0.000212439231054442 0.000823994538302226 0.000608009595732092 0.000929933484977865 0.000260351376137858 6.44648009258285e-05 7.30962610147484e-05 0.000320359705716308 NM_001130753.1 RBM45 Bos taurus RNA binding motif protein 45 (RBM45), mRNA. 0.0 2780 100.00 0.631924497332786 NM_152945.2 RBM45 Homo sapiens RNA binding motif protein 45 (RBM45), mRNA. 0.0 2188 93.51 0.593762823143209 TCONS_00104571_3 sp|Q8IUH3|RBM45_HUMAN RBM45_HUMAN RNA-binding protein 45; 0.0 946 95.59 0.99789029535865 4 coding 1 1 1 0 0.0690499436341832 0.556770998182688 0.013287535548212 0.781809974599639 CCAAACTTTTCAGTCTTCCGGAAACGGACCCCGGACCGGCAACGGCTGGGTGTGGTGCGACGGTCGTGGCTGTAGCACGGCTGGAGCCAGGAGGAGTAAAGGGGTGCGAGCCTGGATTCCGCCCCGGGTGGAGCACCATGGACGAAGCGGGCAGCTGTGCAAGCGGCGGAGGCTTCCGCCCGGGCGTGGACAACCTGGACGAGCCGCCCAACAGCCGCATCTTCCTGGTGATCAGCAAGTACACTTCCGAGTCGGTGCTGAGGGAGCGCTTCTCGCCCTTTGGGGAAATCCAGGACATCTGGGTGGTGCGCGACAAGCACACCAAGGAGTCCAAGGGCATCGCCTTCGTCAAGTTTGCCCGCAGCTCGCAGGCCTGTAGGGCCATGGAGGAGATGCATGGCCAGTGCCTCACCCCCAGCGACACCAAGCCCATCAAGGTTTTCATTGCTCAGTCCAGATCATCTGGAAGTCACCGAGATGTTGAAGATGAAGAACTTACAAGAATATTTGTTATGATACCAAAGTCCTACACAGAAGAAGATCTACGGGAAAAATTTAAGGTGTTTGGAGATATCGAGTATTGCAGCATTATTAAGAATAAAGTAACTGGAGAAAGTAAAGGCTTGGGCTATGTTCGGTACTTAAAACCATCACAAGCTGCCCAAGCAATAGAAAACTGTGATCGAAGTTATAGAGCAATCTTGGCTGAACCTAAAAACAAAGCATCTGAATCCTCAGAACAAGATTATTACAGTAATATGAGGCAGGAGACTTTAGGACATGAACCTAGGGTAAATATGTTTTCATTTGAACAACAATCTGAATTTTCAAGTTTTGACAAGAATGACAACAGAGGCCAGGAAGCTATCTCCAAACGCCTGTCAGTTGTATCAAGAGTTCCTTTTACTGAAGAGCAGCTTTTCAGCATTTTTGATATAGTACCAGGCTTGGAATACTGTGAAGTCCAACGAGATCCTTATTCTAATTATGGTCATGGAGTGGTTCAGTATTTTAATGTAGCATCAGCTATTTATGCAAAATACAAGTTACATGGATTTCAGTACCCTCCTGGGAATAGGATAGGTGTTTCCTTCATTGATGATGGGAGTAATGCAACAGATCTCCTTAGAAAAATGGCAACGCAGATGGTCGCTGCACAGCTTGCATCAATTGTGTGGAATAACCCAAGTCAGCAGCAATTTCTGCAATTTGCAGGAAGTTCTGGATCACAGCTGCCTCAAATCCAGACGGATGTTGCACTACCATCATGCAAAAAAAAAGCTCCTCCTGACACTCCTGTGAAGGAAAGACTTTTTATCGTTTTTAATCCACATCCTTTGCCTTTAGATGTACTAGAGGATATATTCTGTCGTTTCGGTAACCTGATTGAAGTTTACCTTGTGTCAGGAAAAAATGTGGGGTATGCCAAGTATGCTGATAGACTAAGTGCTAATGATGCCATTACAACTTTACATGGAAAGATCCTGAATGGAGTCAGACTCAAAGTTATGTTGGCAGACTCCCCAAGAGAAGAATCTAACAAACGACAAAGAACTTACTGATTCTTTAGAAACAGTAACTCAAGAACAGTGGATCCTGTGAACTGAAGTGGCCCTGAAGCCTCACCGTCTTGGAGCTTTTCCTTAACCAAGAGAACCACAGCTGACATTCACCGTGGGGTGGAGAGAGTTGTGGAAGAGATCCCACCTTTGACCAGAAGAGCAGTGCTGAATGACAAAGGCAGTGCAAGCAGCCCAGAAAGATCTTCCGCCCATCAGCAGATTTAGAACACTTAGAGCAGGATTTTTTTAAACACTCATCCTCTATCCTAAGAACTTTGGTCTTATTGCATGAAAATCCCTTAGCCTTTTCCACCCTAAGCTTAGATCTACAGACATCCTTGCGTTTCCTGGAGAAATGGAATGGGCCTGATATTTCAGACAATGTGCTGGATATTACATCAGCATTTTAGTGAACTCTGAAAGAGCTTAAAGCAGTCCCTGTGGTCTGCCAATTCTGAAATCAGCCTGGCTAAATGTGTCCTCATTGAGATATGGGCAAGAGATTTACGCTACTGGCACTTGACAAAAGAAGGCCAAGAAAGGATTGCAGTTGTCTTCTTTTGGCAGAGGAAGGGAGGATTGGGTAAATTCTTTAGTCTTTGTGAAGAAACATTAAAACATTCTCTCATTAAAACATTTTTTACCTTGACATTTAATGTAAGTTGAATCTTTTTAAAATCAGTTAAATGCTCAGTAATGCTAGTCATCAAGGAAACATTAAAACCACAGTAAGATACCCCTCCACTGGTAAGAGCAGCAAAAATTAAGGTATCAGCAATACCAGATGCTGGTATGAGTGTGGAGCAATAGGATCTCTCATAACTTGCTGATGGGAGTGTAAATTGGTTCAACCATTTGAGAAATATTTGACAAAT EMBV3_08294 CAAGATTTCCTGGTTCAAGAATGGCCTGGACTTGGGCAAAGACGCCCGCTTCCGCATGTT Gene GeneID:767614|MYBPC3:NM_001076536:111_cdna Constitutive 0 NULL GeneID:767614 15 GENE MYBPC3 NULL myosin binding protein C, cardiac EMBV3_07643 TGTAAACACCCTATCTTCCAGGACTTCCTAGGTGGCTCAGTGGTAAAGAACCTGTCTGCC Gene GeneID:505300|SMPDL3A:NM_001035019:5_cdna Constitutive 0 NULL GeneID:505300 9 GENE SMPDL3A MGC126943 sphingomyelin phosphodiesterase, acid-like 3A EMBV3_10198 GGGAGCAGCACCGTGGATCTGCCCTTCCAGACACCCTTCCAGTCCTCAGGCCTGGACACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09502 CTTACAATCCATTCTCCAAGCAGGCTAGGCCATCTCACTAAAGCAGCGTGTGGTCATCAC Gene BVV0101_058215 - 1 EMBV3_17126 GK000016.2:53049144-53064871 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31111 CAGAAGTCAAAAACTAGGGTAAGAGAGGAGAAAGGGGAGCAAGCTTCTGGAGGAGGCCCT Gene GeneID:414348|P4HA3:NM_001001598:52_cdna Constitutive 0 NULL GeneID:414348 15 GENE P4HA3 NULL prolyl 4-hydroxylase, alpha polypeptide III EMBV3_40462 TCCAGTACATCGCAGACCACCTGAAGGCGGAAGACACAGACTTCTCGGTGAAAGAGGACT Gene GeneID:537251|CHRNA4:XM_002692404:348_cdna Constitutive 0 NULL GeneID:537251 13 GENE CHRNA4 NULL cholinergic receptor, nicotinic, alpha 4 EMBV3_19921 AGGCTTGTACCAGCTTACCAAGCTGCGCTTCCTGACCTCGGGCCCACACCTGCCTCCAGC Variant GeneID:512203|C8H9orf23:NM_001046111:19_cdna 370^520 3 EMBV3_41254 GeneID:512203 8 GENE C8H9orf23 C9orf23 MGC137146 alba-like protein C9orf23 homolog EMBV3_31241 AATCAACTGAAAGTTCTTCACACATGGAAATGACTGATGTTAATTATTTTGCAACATTTC Gene BVT0101_078025 + 0 NULL GK000026.2:44885240-44888007 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151156 TCONS_00151170 TCONS_00151160 TCONS_00151169 TCONS_00151167 TCONS_00151165 TCONS_00151162 TCONS_00151166 TCONS_00151164 TCONS_00151163 1 XLOC_092044 Coding TCONS_00151162 XLOC_092044 Coding Coding ZRANB1 26:44841818-44887601 = TSS113062 5144 1 TCONS_00151162_4 708 9 0.88783801494037 1.48776527888497e-07 4.58176283740787e-18 7.44946295210312e-08 9.50010857739229e-05 0.00014306907072045 5.55075764408101e-07 3.62184360130219e-09 1.58911118074272e-07 0.000415131501782668 1.2091500954141e-14 2.98406198369575e-16 9.69635588636836e-67 0.000173335315490794 1.08683202152122e-14 2.57594562221569e-08 1.49200681846533e-16 2.91758409756134e-50 1.85453340552655e-06 1.2971390377423e-15 1.90813981075614e-09 1.8216899267604e-25 6.12761057332164e-08 1.37767757772079e-16 0.00114206919083807 5.91113582218978e-14 3.94493248047588e-11 2.79841835527364e-15 1.31257501373971e-14 3.77311969943619e-08 0.000209668462692774 XM_005225850.1 ZRANB1 PREDICTED: Bos taurus zinc finger, RAN-binding domain containing 1 (ZRANB1), transcript variant X1, mRNA. 0.0 9034 100.00 0.973561430793157 NM_017580.2 ZRANB1 Homo sapiens zinc finger, RAN-binding domain containing 1 (ZRANB1), 0.0 4661 82.57 0.870139968895801 TCONS_00151162_4 sp|A6QP16|ZRAN1_BOVIN ZRAN1_BOVIN Ubiquitin thioesterase ZRANB1; 0.0 1474 100.00 0.998587570621469 2 coding 0 0 0 0 1.16468491189847 0.193716969091489 1.16468491189847 0.193716969091489 ATAGCTTCCTGCCTGACATAACTCACTTCAAGAAGTGCACAATGTCAGAACGTGGAATTAAGTGGGCTTGTGAATACTGTACGTATGAAAACTGGCCGTCTGCGATCAAGTGTACCATGTGTCGTGCCCAGAGACCTAGTGGGACAATTATTACGGAAGACCCATTTAAAAGTGGTTCAAGTGATGTTGGTAGAGATTGGGATCCTTCCAGCACCGAAGGAGGAAGTAGTCCTTTGATCTGTCCAGACTCTAGTGCAAGACCAAGGGTTAAATCTTCATATAGCATGGAAAATGCCAATAAATGGTCATGCCACATGTGCACATATTTGAACTGGCCAAGAGCAATCAGATGCACTCAGTGCTTATCCCAGCGTAGGACCAGGAGTCCCACAGAATCTCCTCAATCCTCAGGATCTGGCTCAAGACCAGTTGCTTTTTCTGTTGATCCTTGTGAGGAGTACAATGATAGAAATAAACTGAACACAAGGACCCAGCATTGGACTTGTTCTATTTGCACATATGAAAACTGGGCCAAGGCTAAAAAATGTGTTGTTTGCGATCATCCCAGACCTAATAATATTGAAGCAATCGAGTTCGCAGAGACTGAAGAGGCTTCTTCAATAATTAATGAGCAAGACAGAGCTCGATGGAGAGGAAGCTGTAGCAGTGGCAACAGCCAGAGAAGATCGCCGCCGACTATGAAACGGGACTCGGAGGTGAAAATGGATTTCCAGAGGATTGAGCTAGCTGGTGCTGTTGGCAGCAAGGAGGAACTTGAAGTGGACTTCAAAAAACTAAAGCAAATTAAAAACAGGATGAAAAAGACTGACTGGCTGTTCCTCAATGCTTGTGTGGGTGTTGTAGAAGGTGATTTAGCTGCTATTGAAGCTTACAAATCGTCGGGAGGGGACATTGCCCGCCAGCTCACTGCAGATGAAGTTCGCTTGCTGAATCGCCCTTCTGCTTTCGATGTTGGCTATACTCTGGTACATCTGGCTATCCGTTTTCAGAGGCAGGATATGCTAGCAATATTGCTTACAGAGGTGTCTCAACAAGCTGCAAAGTGTATTCCTGCAATGGTGTGTCCTGAACTGACAGAGCAGATCCGTCGTGAGATCGCTGCCTCTCTTCACCAGAGAAAGGGGGACTTTGCTTGCTATTTCCTAACTGACCTTGTAACATTTACATTGCCAGCAGATATTGAAGACTTGCCTCCAACAGTCCAAGAAAAATTATTTGATGAGGTGCTTGATAGAGATGTTCAAAAAGAGTTAGAAGAAGAATCTCCAATTATAAACTGGTCATTGGAATTGGCTACACGTTTGGACAGTCGACTGTATGCACTTTGGAACCGGACTGCAGGAGACTGCTTACTGGATTCAGTACTACAAGCTACCTGGGGCATTTACGACAAGGACTCGGTGCTTCGGAAAGCCCTGCATGACAGCCTGCACGACTGTTCACATTGGTTTTATACACGTTGGAAAGATTGGGAGTCCTGGTATTCTCAGAGCTTTGGTTTACATTTTTCCTTGAGAGAAGAACAGTGGCAAGAAGACTGGGCATTTATACTGTCTCTTGCTAGTCAGCCTGGAGCAAGTTTGGAGCAGACTCACATTTTTGTACTTGCACATATTCTTAGACGACCAATTATAGTTTATGGAGTAAAATATTATAAAAGTTTTCGGGGAGAAACTTTAGGATATACTCGGTTTCAAGGTGTGTATTTGCCTTTGTTGTGGGAACAGAGTTTTTGTTGGAAAAGTCCGATTGCTCTGGGCTATACAAGGGGCCACTTCTCTGCTTTGGTTGCCATGGAAAATGATGGCTATGGTAACCGAGGTGCTGGTGCTAACCTGAACACTGATGACGATGTCACCATCACGTTTCTGCCTCTGGTTGACAGTGAGAGGAAGTTACTCCACGTGCACTTTCTTTCTGCTCAGGAGCTAGGTAATGAGGAACAGCAAGAAAAACTGCTCAGGGAGTGGCTGGACTGCTGCGTGACTGAGGGAGGCGTTCTCGTGGCCATGCAGAAGAGCTCTCGGCGGCGAAATCACCCCCTGGTCACGCAAATGGTAGAAAAATGGCTTGACCGCTACCGACAGATCCGGCCTTGTACATCCCTATCTGATGGAGAGGAAGACGAAGATGATGAAGATGAATGAAAAAAAAAATCCAAGAACAGAAGACCAAGGTATCAGCTCTGTGCGGGACCCCACATGAGTGTGTTGCTCCAAGCAGAGCACACGGCATGGAATGAAGCGAACCTGGCAGGTTCTGCTTGGAAGGGTTTTTTCTGATCCATACCCAACAGAGACGATGTGTCTGCTGCATGAGGAGACAGAACTTTGGACTACAGTTTGTAAAAAAGAAACAAAAAACTAATTTTATTAAGACAGAACTTTTTTCCTTTCAGATTGTAAATCTGTCTATAAATGTAACGCATGTGGTTGTGTAAGAAGTTGTGTAATAGGAAAAGTTGTACCAGCATCTTCATATTATTGAGAAGTTTTTCCAGCATGGGCACCTCCAAAAGCACATGGCAGGTCACTCTTTGTTCCTTTGAGATAATTCTTTTTAAAGTAGAACCTGGCATTCTACTTCCATCTGAAAAGATCCATTTTACATTCTGTCTCACTAGAGCTCGGTAGAGATTTGGAAACTTTTTGTACAAATTATCCATAGCAAAACATAAAAATAAAAACAAGCTTTATTTTTTATTAGTAATTTAGTTCCTGTTGTGCCCAATAAAATCAAATCTTTAAGGAACAAACTGTAAGAAAAGTCAGAATTTTTTATTGAGTGAACTTCATGTAGACATCGTTCCCTTGTTTTGAAAAGGGTTTTGGTTTCTCTTATTTTGTCTTTTTCAGTTTCTGATAAGCCGCCTTTTGGTATTTAGGTATTTATTTGTTTGGAAGAGTGCTCTTAAACTGAGGCTTCCTCCACCAGACTCTGGGCAGCAGTCTCCTTGTGAGTAGTTACCCCATGGATATACATTAGGGCAGTGGTTGGGGAGCCAGCCCACTTGAACTGAATGAATTATGTGAAGTCTGCTCACTTGCCTCTGTGGACATTAGACTCCCAGGTTGTCGTGCAGAGGGTCTTTGGATTCTTTATCATCAACTCTGCTTTAAGCAAATTGTGTTAGAAAGGCATGCCTTTGCTTGGGCTAATTGCGAATTTCCGTTCAGAATAGAATAAAGATTTTAAGAATGCAGTAAGGTGGTTTAAATGCATTGTATAATGAATTTCTCAGTGAGTAGTCTGAGAATTTTTGCATGTTGGTTAATTGTGGCCATTCTTATTTAAAGTTATAACTATAATCTTAGGTAGAAAAACTTTCTGTAAAAGTATTATTTGACCACTTCAGGTATACATTCAATACTGGGTAAAAATTTCAGACCTATCTCAGGAACACAAAAAGACTTAGTGTCCTGATAAGCACTTTGTAGACTATTGATGTGGCAAGGAATTTCAAACACACATACACACTCTTTCCCTTTGATAAAAAGGCTGTGAAAACCTTTTAATATTTGCTTCTTGTTTTCTTCTAAGTTCTATTTAGATGGTATTGAAATGTGCACAACCTCAGATTTGATGCTGAAATACTAAAAATAGTAAAATACCTGTGAGATGTCATCTCTTTAGTTCTTTCTTCCCTCCCTGAAAGGTGTTTCCAGGATGAAAGATTGCTGCTGCTGCATGCTAAAACTTGCAGGAAGAATATTTGCAATTGGATCCCATATAAATGAATTTTGATATAATATTGGTATGCTACTGTTTCAAGGGGCTGATGTTTTCTTACAAAATTGATCCTCTGGTTTGCTTTCGTTTTGGACAGTAATTAAGGATTTAGAAGGCTGCCATTCTGACTACTTAGCATAGCATCCCTATGAACTTTTCTTCATATATAGGAAGAATTCTTTAGTGGCCAGACAACCCATTCTAGTTGCGGTTAAGCCAGTTGAAGAAGACAGAGGAAAGGTTTGAGGGAGAAGCATCTGGTGGCTAGGGTCTCCAGGACAGTCAGTGCTGTTTGGGAAGCCGCAGCTCGGTCTTCGGCCTCCACGTGCTGTGTCTGCTGAGTGATGTGTCCCCTGAGGTGCCTCTACTTATAGATCAGTGACCCTGGCCACATCTAGCTTAACAGGTACAGCATTCTTCCCTGTGGGAAAGAACTATATATGTGTGTGTGTATGTGTGTGTGTGTATATATATATATATACACGCTCCAGTTCTTAGGCTTCAGACTTGGCGGAGCTTTAAATGGTTTTCACAGCAGATTGGCTGGTAAAGGCTAACATTTTGGTGAGTCAATGCTATGTTAAGCTCTTGAACTATCAAACAGCCATAACTATCATCCCAAGACAGAATTTGCAGTCCTTTCTCAGATTCCATGTGGCGGGGTGACAGATAACTCAGTGTCTTTTGGTTGACTCTGGACGGTAATACCTGAACTGTATGGACTTGACTTTACGGTTCCTCTTGGGAGAATACAGCGTGGTGGTTTCTGTTCAAATTAAAAGACAGGATGTGGGCCTGCCTGCCTTTTCATGTCTTTGGCTCTTAGGCTCATCCTGTGACAGACGAGTCTGTGTTAAGGGGATACTGCTGCGCATGGGCGGGTGGGGCCTCCTTGGTGTGCAGATGTCATCCCTGCACTGATTACGCTTGACAAGTGGTTATGAAGATGACAGCGAACCGCCGCTCCGCTCCCCGGAGTGGTGATACAGGTCAGTAACCATGCGCTCCACCTCGATCCACGTCAGGTGGCTTTAATGTAATTTTTCACGGGAAAGTTGGGATAGGACCACCACCTTAAAATGAGTGAGGAGGTTGATGTTTTCAGTTGCCATGACTTTTTTTTAAATGGAAAGAGGCGGGGCAGTTGTAAAGGTGTTTGATATCTGGACTTGATGGACTTAACCAGCATTTACAGAAGGGATTTAATGCTATTTAAGAAAGGAAGACTTATTAAATCAACTGAAAGTTCTTCACACATGGAAATGACTGATGTTAATTATTTTGCAACATTTCTTTGTAAATATCATTTACAAACAATTTTTTGAGATTCACCTCCCTTTCCTGCATTAATGCTTGGGTCAGGTAATTTTACTTTTGGGTAAATTAAAATCAAA EMBV3_09170 GTGCTCCAAGCATGGCTCCCCCCAACACCTATTTATTTCCTTGTTTGTGTTGATGCTGGG Gene GeneID:100134966|PPP2R5D:XM_002697246:442_cdna Constitutive 0 NULL GeneID:100134966 23 GENE PPP2R5D NULL protein phosphatase 2, regulatory subunit B', delta isoform EMBV3_20245 TGCAGTTCCCCAAAGTAACAGACAATCCTCATCACAAAATCTACAACATGGTCTTGGGAG Gene BVT0101_000739 + 0 NULL GK000008.2:67614132-67724945 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42556 GACTCAATAGATCAAACCTTTCTGGCTCAGGGCAACAGTGGCTGTGTGGCAATTGTGCAA Gene BVT0102_059284 - 1 EMBV3_00446 GK000026.2:46366459-46758606 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01287 AAACTGTTTTCCCCCTCGGGTTTCTATAAGAGTCAGGTGAAGGCTGATGGATTTCAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40253 CAGGGCCAGGAGCAGAAGCCCACTCCGGGAAGAAACAGGGGTGGGGAATCTATTTTTTCT Gene GeneID:524070|BAI1:XM_002692569:244_cdna Constitutive 0 NULL GeneID:524070 14 GENE BAI1 NULL brain-specific angiogenesis inhibitor 1 EMBV3_37453 TGCGTGATCCACCAGGATGACTTCTTCAAGTGCTGGAGTCCCTGGACATGGAGGCCATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32002 CAACTGTGGTCCATGGTGAGAGGATGGAGAAACATCTGGGGGATTCTAGTTTAGCCACTG Gene GeneID:539238|ANK2:XM_002688100:173_cdna UTR3_Alt 2 NULL GeneID:539238 6 GENE ANK2 NULL ankyrin 2, neuronal EMBV3_33880 CATCTATTCCTTCCTTTTTCTGTATTTAAGGAACAGACAGCGCAAGCTGGGGACGAAGCT Variant GeneID:504908|DOLPP1:XM_002691639:342_cdna 389^706 1 EMBV3_01153 GeneID:504908 11 GENE DOLPP1 NULL dolichyl pyrophosphate phosphatase 1 EMBV3_27110 AGCAATTCCAGTTGGATTCCCTCCAGCTGGCGTTATGCTCCTGCCTGTTGTTGCTGCTAA Gene BVV0102_342770 + 1 EMBV3_33104 GK000002.2:119490382-119524656 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17812 AGGTAAACAGGACAATGGCTGGAGTAGCCAAGACCAAGACTGAATGTACAGCAGAGTGCC Gene BVT0102_048058 + 0 NULL GK000021.2:32719333-32773321 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121025 1 XLOC_073320 Coding TCONS_00121025 XLOC_073320 NonCoding Coding - 21:32767461-32770263 - TSS90266 2802 3 TCONS_00121025_4 76 1 0 0.000411999985120369 0.000106247401241 0.000174061291739767 6.26886359307411e-06 0.000135181184348877 6.49068865534062e-05 1.50186906652018e-05 4.8360254574911e-05 4.45522500290272e-05 6.96180969209813e-103 2.04238959681982e-05 0 1.12638537039325e-05 0.0003788980350825 1.74818651576804e-06 0.0015463672480552 1.5572906150483e-05 0.000459649816641648 6.22783780976176e-05 0.000173982776224586 6.14141918925896e-06 0.000129580166495065 0.000162653188295131 9.48712539857578e-05 0.000200350692505693 2.90678612011346e-05 3.2914824832515e-05 8.56964819331062e-05 3.80872718361256e-05 0.000354038549582374 XM_003583743.2 LOC786652 PREDICTED: Bos taurus pseudopodium-enriched atypical kinase 1-like (LOC786652), mRNA. 0.0 4650 100.00 0.919700214132762 XM_005254670.1 PEAK1 PREDICTED: Homo sapiens NKF3 kinase family member (PEAK1), 0.0 1245 76.60 0.596002855103497 0 noncoding 0 0 0 0 0.0715968900374073 0.530159433283137 0.0661157743863328 0.309264576127698 TGTATATTGAGAATTTGAACAATTAAGCCGCTATTGGAACTTTTCCTTAAGCCACACGAGCAAGAATAATATCTCGTACACTTTTAGGTAAACAGGACAATGGCTGGAGTAGCCAAGACCAAGACTGAATGTACAGCAGAGTGCCTTGTTAGCGTGCTAACCTCGTCTGGGAGGAAAGGAATTAGATGTTCCACAGGAAGGCAGGGGGCTGTGAAAGGGCTCCCTTGCTCGCCTGAGGAGAGCCCTTGGTGCACTAGCATGATGCCAAGGAGCTGATTCATCAAGAATAACAGCAAGATGGTGGAAAGAGCAGTTGCAACCCATGGCATCAACAACAAAATAATGGTAAAGGACGCCCACTGACCCACAGGCTAAGTCAGAACTGGAAGCCAGGAATATGGCAGTGGGTTTTAAGTTTTGCCCTCAGAAGTAAACCAGCTGAGATAGACAGGGGAGCACAGCACTCACATTCCCTAATCGACTGATGTTGAGGGCCCAGAAGTGAAATCTGTTGGTTAGAATTTTAAGGGTCTGAGTAGCCTTTCACTGTCACTGGGGGCCAGTTGTGCTCCCAAACTCAGTCCCAGTTTGTGAACTTAGAAAACTCTAAACCAAGAGATCTGAGCCTCTGGAAATATTAATGATAATCCTGGGAATTAGACTACTTAAAATTGTATTTTAAAGTCTCTAGCATTATAAAATATCCATGAAAGATCTTTGGGGCCTACTAAACAGTAGGGCATAGAAGGATTGCAGTCCACTTCCCACATTCGAATTAAGAATACTTTGGTGCTAGGAAATTACCTGACTTAGTTTTGCTGATAGGAGTTTTCCCTAGATGTTACCAGCAGTGATCTGAAAGAAAATATGGGTTAGTTCCAGAAATTGGGATGGGCAGGGAGTAACTTGACTTCCTGGGCTAACTCTGACATGGTTTTTTTATTCCCCTTACTAGTTGACAAGAAGTAAAAATTCTGGTTCAGCCTAATGAGTGAACAGGATGGCTGCCCGTGAAAGCAGGTGGCTAGTTTTACCTCATTGAAGCCCATATTCTCAAAGGCCCAAAGTGCTGTGCCAAGAAAATCCAAGTGCCACTGTTGCTGCAGTGTGTGCTGCAGCCTGTGCTGACGGCAGCACCAAACGGGGTTCCACGGACCAAACCGACGCCATTAGGGAGGCCACGAGTGGTGCCGTGCAGGATGCTAGACAGAGATTATACCAAAGAAACCAAGCCTCTTTGTCCTGATGTTTTTTAGGTGATGAGGCTGTTATGACAGACGCCATGGGAAGAGAATTCACATGCATTCCCACATCCAGGTATTCCACTGATCAAGTAAACCATCCTCAAAAAAGCACCTATTTTTTTAAAAACAAGTCCATTTTGTGTATTGGGGTGGGGGGTGGGGAAGATGATGCTAAGGAAAACCTTGGGCAGATTATAAATTCCCCAGCATTTCAGGAGAAAGAACTATCCCCTCTCCCATTGACATGATTGTGACAATCACCCAAACTTCAGCTTGGGAACATCATATCCCTGTAATACTGAAAGCTGAGGTGTTTTTTGTTGTTTTTTTTTTTAAAGAGATGTGGTAGTTTCAATAGGTTTGTTTAAAAAAAAAAAAAACTCTTGGGAAATTTCTTTTTAAAAATCTAGTATTTTTTATAAACCGAGGTGTTCACCACTCATCATCACCACCATTTAATATAAGTGCCCAGAAAGTACAAGGTGCTATACAGCTGTTAAACACCCTCTCTCCGCAGCTGTTTGAAATTAGAGTAGGTTCCTGCGTCAGCCACTGCAGAAGCTTTTCCCCTTTTACCCGGGCGGGCTGCAGGGGCTTGCATCCGGGACCTCCCGTCAGGTGTTTCCCACGCCGCAGCGTTTATTCCAGCTTCTCACTTTTCCGCATCCATTTGCCTCCACTTTTATTTTTTAAATCAAGGAAGTTTCAGGGAATCAGAAGAGGTCGGACATTTTTTAACCTAGCAGAAGTACAGAGTCATATATTTTGCTACAAATATTATATTATGGAAAATCCACTTTGCCCGTGTAGTGTGTGGAAAGTGTGTGTGTCCGCGCTCCCGATAACTTGAATGTTGAACCAGCCCTATGGCTTCAGGGTAGCATTTTTGAAAGATAAACCACACTGCTTCAGGAAACGCTCCAAATAACTACTTGGTTATCCCTTCCCTTAGCAGTTTTAAAAGGTGTTACATGCGAACACACCGGGACAGGATTTTTCTGTTGATACGCCGGGCATTTTGGTATGAGATGAGGGCAGAAGCAAGGTCTTGTCCTTCTCAGTGATTTGAATCATGGCAGTCCTCATTCCGCTCTCTCTTTCATTCCCCACTGGCTCTGCCCATGCTCGCTTTTTGAAAATCTTGTTTCTTTTGTTCTTTCCTGGAGCCTCACCTCTCTACTTAACATACTTTAGAGTTGTAGAAACCTATCAACGAAAGGTCCCCTCTGTCACCAGGTGGCGCCGCCCTTTGGTTTGCTGTGGTACTTTGCTGTGTTCTCTGTGGCATCATGTTACTGTGTAAATAAATTCATTTTCATATCCAGTAAAAGCAGACAAGCTCTTGTCTTTTCAGCTTCTCTCCACACTGACGTGCGACGGACATGGTTACATCTTAACTCGCAGGAGGTATGCCTTCTCAGATGCTCCTCCCTGCTGACCTGGACTTGTTTTCAGTTCATTCCCTCCCTGAACTGAGAAAACCAGGCATAGAAGGGCAAGTGAAGGCCTTCAGCTTTCCCCCAGAGCTCAGAGGGCTGCAGGTTTGCTGTGTGAGATC TCONS_00121030 s 5' 0 TCONS_00121030 s 5' 0 EMBV3_14735 TGTATCTGAAGCCAGAAGCATCAGGGGGAGATGACACAGTGATCGCAGTTCCTTACACTG Gene GeneID:509633|LOC509633:XM_002685936:92_cdna Constitutive 0 NULL GeneID:509633 3 GENE LOC509633 NULL similar to Olfactory receptor 10X1 (Olfactory receptor OR1-14) EMBV3_19624 TCTAGAAAGCGCAAGAGGCCCATTCAGAAGGTAGAGATGGGAACCTCGAGTCAAAACGAC Gene GeneID:529312|SSR1:NM_001102122:220_cdna UTR3_Alt 2 NULL GeneID:529312 23 GENE SSR1 MGC140667 signal sequence receptor, alpha EMBV3_24856 ATTTTAGCATCGAAGGGTTGTGGAGTGAGGGGCAGCAGAGCATGGGGAGGGGGAATCATA Gene GeneID:525690|MGC139367:NM_001083704:150_cdna Constitutive 1 NULL GeneID:525690 11 GENE MGC139367 NULL hypothetical LOC525690 EMBV3_16136 AAGTCCCACTCCTGACACCAAAGCCCCTGTGTTCATCCATCTGCTGTTCATAGGGACACT Gene BVV0102_261005 + 0 NULL GK000013.2:55655517-55672234 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07609 GCTCGAGAGCCTGGACCAGCTGGAGCTCAGGAGAACGAGAAGAATTAAATCTGACTGCGA Variant GeneID:506107|BAG2:NM_001034264:86_cdna 281^390 3 EMBV3_42939 GeneID:506107 23 GENE BAG2 MGC128966 BCL2-associated athanogene 2 EMBV3_12144 CCCTCCCAACTACCTGTAGCCATGCTGTGCTCTTGTCTCCTCAGGGTATCTTGGATAATA Gene BVV0102_229440 - 1 EMBV3_42616 GK000018.2:45715964-45731749 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083374 TCONS_00083373 TCONS_00083376 1 XLOC_051245 Coding TCONS_00083373 XLOC_051245 Coding Coding ZNF181 18:45704340-45721278 j TSS62669 8645 1 TCONS_00083373_6 415 0.251012145748988 5 0.489874239829958 1.08464526558585e-06 0.000359402996223449 6.96845057678647e-05 0.000182228155008981 1.84264146785203e-08 3.24617234653226e-05 2.36330378741293e-05 5.48082066446743e-08 0.000153424685618487 3.89170011322867e-05 7.60072102292385e-07 9.51266731890689e-08 8.27511195402205e-13 1.17211450721242e-05 1.81039106259354e-06 5.17856501010945e-07 5.8745060973014e-10 0.000147715670069145 6.31327845481061e-05 0.000331523596334697 2.76459147430013e-05 3.34212914963492e-11 0.000140621052328225 3.25068410138919e-05 0.000307184659156364 0.000143709904408679 7.58155476196015e-05 5.01801114791753e-06 3.90929485072786e-05 1.8502125638636e-06 NM_001076549.1 ZNF181 Bos taurus zinc finger protein 181 (ZNF181), mRNA. 0.0 3469 99.95 0.222672064777328 NM_001029997.3 ZNF181 Homo sapiens zinc finger protein 181 (ZNF181), transcript variant 0.0 2006 82.86 0.223713128976287 TCONS_00083373_6 sp|Q2KI58|ZN181_BOVIN ZN181_BOVIN Zinc finger protein 181; 0.0 810 100.00 0.956626506024096 6 noncoding 0 0 0 0 -0.855449921830564 0.00220314559987921 -0.0640259938426421 0.286211925775862 ACGGGAAGATGCCACTTAACAGATTCAATCTGCTCAACAATCCCAAGCAGGAGAAAAGGCAAAGAATTTCATAAAAAGCATGAGAAAATTCTCTCGTGCTATTTATAATTAAAAGAAAACAGGTAAAATGAATTTAATTAAAAAAGAAAATAAAGGCAACAACCCAAGTTAATACCAAGAGTAGAATGCTCTGGCCTTGATACATCTGTCCAGAGCCCGTGTGGGTGGGCTGGGCAAAGTCTCAAAGACAAAGGAGGGTCAGAGGAGTGGTTTTTCCCACGATTGAGGGTGTTTATCCTCAAAACCCTCACTTGAATCCGATAATCCTGAGTCCTTCGAGGACATGTAATGCACATCACCGCGGTAGTCAGTGTCCGAGCGACGACGTGACCCCACGAACTTCCGGGAAGTGCAATTGGTCCCCGTTCAGCTCATGTTGTGACAGCTCGGATACAGGGTATTTTAGGAAATACAGTCCTGGACAAGTGGAAGCTAAATACTCAAGAGCAGTACAAGCCGAGCAGAGTGGCAGCAAAGTTTTGAATGACAGATCTTCGGCTGGCAGAGGCCACTTCTTGTCCCGCACCAGCAAGTCTGCCCTTGTTCAAGGAGGAAAACGTCTGTACGAGCACAGAAATGACCCAAAAGACGTTTCACGGCCTCGTAATCTTCTGGGAAACATAGGTTCCCGGTTTGGGCTCTCATTATCTTCACAGCGCTTGTAGACGCTGCCGTTGGTTTCGGGAAGCGGAGTTCGCCACAGACGACTGTTGTCTGCATCCTTCCGAGGGGGTCGATCCCAGTGGAGTCTTTAGGCGGTGTAATTTCTCACAAAGCCCAGCCCGTGGTCTCGCGGTGCTCCGAGATCGCGCGACCGCTGAGCCTCCTGGGAAGTGTAGTTTTCCGGAAGGCAACCGTGCGACTCACCGGCAACTTTTCTCCTTGAAGCGGAGGAGTCTGAGAAGTGCCGCCGGGACCAGTGCTACGCCTGGGGCTGCCCGGCGTTTGTCTCCGACCCAGCAGCAGTATTCAAGGTCCTGGAATCGCGCAGGACTCTGGGCAGCACCGTTCCGGCGAGGCAAGCGGCCTTTGTTCGCTACAGCTACGCGGCGCGTCAGGCACTGCCCTTCTATAAGAAGAGAACCTGGAAAGAGGACTGTGTTGACTATTGGAAATTGCAAAGTCATGTTTCAGGTGACATTTAGTGATGTGGCCATAGACTTCTCACATGAAGAGTGGAGATGGCTCAATTCTACTCAGAGGAATTTATACAAGGATGTGATGGTCCAGAATTATGAGAACCTGGTATCCCTAGGTCTTTCCATACCTAAGCCATATGTGATTGCTTTATTGGAGGATGGCAAAGAACCTTGTATGGTGGAGGAAAAGCTGTCAAAAGATACATTTCCAGAGAATTTCTGCTGAAGGGAAGTCACATAAATGTGATATACTTAAGAAGAGTTTACCAACAAATTCAGTTATAAAAAATGAGAATATCAATGATGGAAAGAAACTTCTGAATTCTAATGAAAGTGTAGCAGCCTTCAGCCAAAGCAAATCTCTTACCCTTCACCAGACTTTGAATAAAGAGAAAATCTATACATGCAATGAATGTGGGAAAGCCTTTGGCAAACAATCAATCCTTAATCGGCACTGGAGAATTCATACAGGAGAGAAACCCTATGAATGTCATGAATGTGGGAAGACTTTTAGCCATGGCTCATCCCTTACTCGACATCAAATAAGTCACAGTGGAGAGAAACCTTACAAATGTATTGAATGTGGAAAAGCCTTTAGCCATGTCTCATCACTTACTAATCATCAAAGCACTCACACTGGAGAGAAACCATATGAATGTATGAACTGTGGAAAGGCGTTTAGTCGCGTTTCACATCTCATTGAACATCTGAGAATTCATACTCAAGAAAAACTCTATGAATGTCGAATATGTGGGAAGGCATTCATTCACAGGTCATCTCTCATTCACCATCAGAAAATTCATACTGGAGAGAAACCTTATGAATGTAGAGAATGTGGAAAAGCCTTTTGCTGTAGCTCACACCTTACTCGACATCAAAGAATTCATGCTATTGAGAAACAATTTGAATGTAACAAATGTCTGAAAGTCTTTAGCAGCCTCTCATTTCTTATTCAGCATCAGAGTATTCATACTGAAGAAAAGCCCTTTGAATGTCAAAAATGTGGGAAATCCTTTAACCAACCTGAATCATTGAATATGCATTTGAGAAACCACACTAGATTGAAACCATATGAATGCAGTATATGTGGGAAAGCCTTCAGTCACAGGTCATCTCTGTTTCAACATCACAGAATTCATACTGGAGAGAAACCCTATGAATGCATTAAATGTGGGAAGACCTTCAGCTGTAGTTCAAACCTTACTGTACATCAGAGAATTCATACTGGAGAAAAGCCATATAAATGTAATGAATGTGGGAAGGCATTTAGCAAAGGCTCAAATCTTACTGCCCATCAGCGAGTACATAATGGAGAGAAACCCAGTAGTACAATAAGTGTGGAAAAGTCTTTAGGCCATATGAGTCACTGTGTGTATGAAAGATCACATAATAGAGAAACTGCATAAAGGCAGTGTTCATCATACTATACTGTAGCTGTAGATCTTCTTGGATTCAAAATCAGAAAATCTATACTGGAGAAAATGTAATGAATATGGGAAAGTCTCTAGCAATGATATAAGCCTTATTGTTTATCACAATTCACACTGTAGAGAGACTATGATGGCAATAAGTGTGGGAAAGACTAGCCAGCATTAATCCCTTAGTTGACATAAGTAAATCCACACTGGAGAAAAACCCTTTACATGTAACAAGTTGGGAAAGACATTAGGCAAACATGAATCTCTTAAGAAACATTACACACATACAGAAGAAAAGCAGTACGAATATAGAAATTTTGGGAAGTCCTTCAGTTAAAATACATCCTTCATTCTCTACATCAGAGAACTCACACTGAAGAGAAAGTTTATGTAAGGAATGTAGCAAAGTGTTAGTTCACTAAGCTTGCAGGCATCAGAAGATTAATGCTAGAACCACCTGAAGGATGTAGGAAGTATGTGTAAGTCTTTCTTTGCAATGATGCTAATTTGTAAACAGTTCTACAGGAGAGCAAACAAGCATAAATCAACATGCATATCATAAAGTAGCAGCATGCATTTTACTCCAGGTCCTACATAAAAAATAGCTAATGGGCATGTGAAGATATATAGTCACTCAGTGAATCCAGTAAATGTAATAAATGAACATTGCAATAGAAGTAAAAAGTGGTATGAATAAAATTTTTCATCTCTAATAAAGTGGTTTTGTGTATGTTGAACTCCTTTGACACACTGATATTTCTTAAGAGTTTTCCACTATTTTTCTCTTGACAAATGAGGATCAGCTTTCCTGTATAGCCTTCGGTGGAAGACCAGCAAACCTAGAAAAAAGTGGCCTGATCTCTGTACTAAGAATGCGACTATTTTGGTGAGGTTAATATACAGTGCATTTCCTGTTGACTTAAATGATGCATTTTAATTTTTACGTGTGCTGTGAGAACCCAACCAAGAAATTACATACAGTGAGGGATTAGAGCAGAGTGGATGTGCTTTTTAGTCCAAATCCTAAAGGATGAGTCCTAATTACAGTGACCATCCATAACTGCAGATTCTGCATCTGTAGATTCAACCACTCACAGTTGGAAGTGTTTTTTGAAAAGGTTTCATCTAAAAAGAAAACTTGGGACTTACCAGCTGTAGGCAATTATTTACATATCATTCACATTACGTTTACAACTATTGACATTGTATTGGCTTTTGTAGTGGCTCAGGGAATACATCATATTAGGTGATGATTTAAAAGTATACAGGAAGATGTGCCTAGGTTATAGCAACTATGCCATTTTATTTAAGGGACCTGGAGCACCTACAGGTTTTGGTATCTGTGGAGGTGAGGGAGTATGTTGGTCCTGGAGCCAGTTCCTTGCCGATAAAGGACAACTGTAGGTAAGGCACATGTGCTCTCAAGGATCATTCTAGGCAAAGCAGACCAGCAAGTTCTATCATGTTTGATGCAGCTGAAATGCATTATGTAGTGTCTAGTTTCTAGTTTTGTGGCTTAGGTATTACTGCTGGCAGCAATACTAATAAAGCATCAGTTGTTTCCCCATCCCTTGATCATTGTTATGGAGGGTTGGAATTGAATAATCCAGAGCCATTCCCACAACTTCTGCAGCCTGCTCACCAATTTTGATAGCACTAGTATCCTGCATCATAGCTTCTGGAAATATTTAAGAGCATTTTTGTTTTTTACACTGAAGCTTGACAGATAAATATAGTTTCTAAGCAGGGTGGCTTCAAATATTCTAAATGGAATAGACTTACTGGCTTCACAATTTCTTGTGACTGGAGAGGTTATAGAGATCAGTGATGGATTTTACAGACACTGTTGGAAGTAAACGGCATTTAAATGCAATTTATGTTTCTGGTTTTATTCTCTATGGCATTTGATAGTTGTAAGTAACAAATTTTAAGAAAGGATATTATATCATTGATACAAGTCTGGTTTGGGATGAATGATAGGGTTTTCAACTTTAAATAAAATACTCACCTACTCTGGTATGTGCTACTTTAATGGAAAGCCAATAGGTGAAGGCACATTCCATATCAATTCTCAGCAGATATAGTGGGTTTGGAATGGGATTTTTAATATTAAGCAGAGATTTATATTTCCTCTGATTAGTTAATACGATTTTGACATTCTATGGAATGTTGAAGGATCTTTGAGAGGTTTATAATTAAAGGAGCACAGGATGGTATCAAACAAGGATAAGAACATTTATGATTATGGATGGACTGGCCCCTACATGTATATTTAGTTGTAAGATAGTGGCAGTAGCTTTTTGTTTCTCCCATGCTCTGCCCTCTATTCTCCCAAGCACTGATGCCAAAAAGATGAACCAGTCCTTTAATCTCCCAGATTTTATTTGCTTTCACTACATACAGGTTCATGCCATCTTACTTTGTTATAAGATTCATCCAGATACTCATACTTTTTCATTTAAAAAGCATGAGCATACATATCATAATATTTTGCAATTCTTAAAGTGCCTTCACAGTGATACTGAACAAGGAAAAGAAAGCCAGAGACTTAAAGATAGCGAAGGTTTTAAGGAAGCAATAAGAGTATATACCTTGTTACAATAAGATTTGAGCCGAGATCGTCCTGATGTTATAATATCACTAGTGGAGAATCATGCTCAGTCTTACTCAACCATTTCTTGAGCATCTACTGCAGTCAAGGTAAATAAGACATGTTCCATACAATTTAAGAGCTCAAAAGTGTGTGTGTATGAACAGCATAGGCTCTGGAGTCATGTTACCTGGGTATAAATCCAAGTTGTGTGTATATTGACTTTGTACAGCCTTGGACAATTTACCTTGCTGTGCCATCTGTAAAATTATTTTGTCTGTAAAATGATATCTCAGGATTATGATGAAGATTAAGTAGGTTAATTGGTATAAAATGCTTTGTACCTCAAAAGCATTTAAATATTAGCTATTGATTTCATCATTTTCTTCACATGACTGCATTATTCTGGTCTCAAATGTCACATCTTCTAGTGGGTTTTCATAATCACTTGTCACAACTTACTTATTGATTCACCTTTTGGTAGCTTTTACAAGACACTCCCATTTCCTTCCAACAAATCTTCCTTTGGTAACTGAACCATCTTGCAGGAGAATATATTTATTATCCAAAATACCCTGAGGAGACAAGAACACAGCATGGCTACAGGTAGTTGGGAGGGTATACTACACATGTGTTTTGGAGAAAGAGCAGAATGAAAGAGTCTTCAGATCCCTGTATGGAGTAGAGTAAGGCTTTACCCAGTATCAGAAGCCTAAAGGACTTGAGCATGACCTCTCAGTACAAGGTCCTCTGGGTTGAGTGCAACTGCCCTCACTGTTCCTGAATGGAGGTTCAGTTCAGTTCAGCTCAGTCATGTCTGACTGTGACCCCATGGACTGCAGCACACTAGGCTTTCTTGTCCATCACCAACTCCCAGAGCTTGCTCAAACTCATGTCCATCGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCTGCCTTCAGTCTTTCCCAGCACCAGGGTCTTTTCCAATGAGTCAATTCTTTGCATCAGGTGGCCACAGTATTGGAGATTCAGCTTCAGCATCAGTCCTTCCAGTGGATATTTTGGACTGATTTCCCTTAGGATGGGCAGGTTTGATCTTGTAGTCCAAGGGACTCTCGAGAGTCTTCTCCAACACTACAGTTCAAAAGCATCAATTCTTTGGTGCTCAACTTTATGGTCCACTTGTCACATCCATACACGACTAGTGGAAAAACCATAGCTTTGACTAGATGGACCTTCATGTTATTGAAGATCATTGATGCCTGGAAAGTGAGAGTAGCTTCAATAACCTTGGGCTTGTCAGATGTTGCTAGAGACACTTGTGCAGTCATTCATAAAGATCCTGAAAGAACTAAGGCACATATCACAGCACTTTGTGGGAGGCTAGCTTTGTGTTTGACACCAAAGAAGAGTCACACACTGTCTTTTAAACAGGATGCAATTATGTCAGAGAAAAGAAATGTCTATGATTTCACTGATGAAAGACAATGACAAAGTTGTGTGGCTTGAGAGACACAGAAAGTAAGCTCTGGCATTAGAGATTAACCAGGAAAAAATATAATGGCAACAAACAACATTGTTATCAGCAGTGGTTAGTTTCATGGCTATGTATGGTGCACTGTATACCTGCACTGTATGCTAAGGACTTTGCAGCATTCAAGCAATTAAATTTCCCAGTTCTAGACCCAAATTTCCAAGTTTGAATCAGCCTATTGATACTGGCACTTGCTTTCCATTAATCTAAGGAAATTTACTTCTCAAGTTTTGACTTCTGCACCCAAACAGAAATAGTTTCCATTTTATCAGATGGTTTTGAGAATTTACGCATAAAGCAAACAATGGAGTGCCTGGCACATGTAAGTCATTCAGTGTGTTTTTCTTACTTTTATTAATCCTCCCACAGACTATTATATAAATATTATAATCATTTTTATGACACAGTCAGCAACCTGAGACTCAGGCAGTATTAGCAAATATCCCAGAGTCACACATCTCAGGAACATAGGCTGAATTTGTAGATCTAGTGAAAGGCATGCAGTTACCTCCTTGGCAGTATTGTGTCTCAGAAGACCAAAATTCTTCTGGCAATCACACAGATCTTCTCATGCCTCCTTGAACAAAAAAATATTCCCTTAACCAAGTATTCCCTTTGATTCATTCAGCCTAGAATGTCTCCAATATATTCCAGCCAGAGAGACTAATGTCTACCTTACAAAGTTCATTGTAGTGTCTGACAACAATTCCTCAGACAATAATGAAGAAAATGAGGGGTAAAGAAGTTATAAGGCATTTGAAAATGATGAACAAATTGACAGAAGTTCCTCCGATCCAGTAATTAAATGTAAATGGATTAAACTCACCAGTCAAAAGACAGAGAGTGGGAGATTTCAATACCCTACTTTCAGTAATGGATCGATCAACCACACAGAAGATAAGTAAAGAAACAGAGGACTTGAACAAATCAATTTTAAAAATCTAACAGAGAAGTGACACTCTACCTGAAAACTGCAAAATATACATTCTTCTCAAATGAACATGAAACATTCTCCCTAAATTATTGTATCATCACACAAAGTAACTTAAGTGACTGCAACAGGATGAAATTAGAAATGAATAAGGAAAACTGGAAAAATCACAAATGGAAATTAAAGTGCACACTCTTAAACAACTGCTATGTCCTGAAAATTCATATGATGAAATCCTACTAGCCAATTGGATGGTGTTAGGAGGTGGGGCTTTGGGGAGGTGCTTAGGTCAGAGGGGTGGAACCCTCATGAATCAGATTAGTTCTCTTATAAATGAGATCTTACAGAAGATATTAAGAAGAGGTGGCAAGAGTACACTGAAGAACTGTACAAAAAAGGGTCTTAATGACCCAGATAACCATGATGATGTGATCACTCACCTAGAGGCAGACATCCTGGAATGTGAAGTCAAGTGGGCCTTAGGAAGCATCACTAAGAACAAAGCTAGTGGAGGTGATGGAATTCCAGCTGAGCTATTTCAAATCCTAAAAGATGATGCTGTTAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAAGTCATCAGTGGCCACAGGACTGGAAAAGGTTTCTTAATTCCAATCCAAAGAAGGGCAATGCCAAAGAATGTTCACACTTACCACACAGTTGCACTCATTTCACATGCTAGCAAGGCAATGCTCAAAATCCTTCAAGCTACGCTTCAATGGTATGTGAACCGAGAACTTCCAGATGTACAAGCTGGATTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCTGTTGCATCATAGAAAAAGCAAGAAAATTCCAGAAAAACATCTACTTCTGCTTCATTCAGTTTGTTGTGACTATGTAGATCACAACAGACTGAAGAAAATTCTTTAAGAGACAGGAATACCAGACCACCTTACCTGCCTCCTGAG EMBV3_11349 AGGGAAGGCAGTTATGGAAACAGACCTGAAAACTACAGTAGACTCTGATGAGCAAGAAGC Gene GeneID:100297513|LOC100297513:XM_002691064:496_cdna Constitutive 0 NULL GeneID:100297513 10 GENE LOC100297513 NULL hypothetical protein LOC100297513 EMBV3_28932 GGGGCGTGACCCTCAGGAAAGGTAAGTCAGGAGTCCAGAAATACTAAGGTTCTCCAAAAA Gene GeneID:617777|SHE:NM_001098140:233_cdna Constitutive 2 NULL GeneID:617777 3 GENE SHE MGC149000 Src homology 2 domain containing E EMBV3_05221 TACTCCACGTGCTCTGTCTGCCAAGAAGAGAATGAAGACGTGGTGCGAGCCGCCTTGCAG Gene GeneID:616714|NSUN5:NM_001102303:305_cdna Constitutive 1 NULL GeneID:616714 25 GENE NSUN5 MGC152614 NSUN5C NOP2/Sun domain family, member 5 EMBV3_30634 TGGCAATGAAGATTAGACACATCTTGAGATGAAAATATACTAAAATTTAGTGCGTGTGCA Gene GeneID:538583|ENPP4:NM_001081535:320_cdna Constitutive 2 NULL GeneID:538583 23 GENE ENPP4 MGC152041 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) EMBV3_18402 TAGCTATGGGACAACCATCGACAGGAGGACGCTGGAACCCACCACAAAAAGATACCCCAT Gene BVT0102_118134 + 0 NULL GK000004.2:55645243-55858085 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184099 TCONS_00184103 TCONS_00184098 TCONS_00184101 TCONS_00184102 TCONS_00184100 1 XLOC_111274 Coding TCONS_00184102 XLOC_111274 NonCoding Coding LOC100847965 4:55732949-55857765 o TSS137170 571 2 TCONS_00184102_1 41 4 0.995457276769619 0.000857010409706631 0.000453405358246464 0.00157423322632212 0.00103389029110387 0.000211225992214746 0.000136440228054856 0.000581620241248322 0.000624474189850879 0.000751045245914788 6.40758394498833e-05 0 2.43737359120314e-60 1.06261442696651e-07 0.00126032220003387 0.000107978530370198 0 0 0 0.000267204150151746 0.00132649929350727 6.67444252676797e-08 0 0 0 0.000537883481467678 0.00094260902126851 0.000434086643113034 0 2.13919597532412e-06 0 XM_005195889.1 LOC101902386 PREDICTED: Bos taurus protein kintoun-like (LOC101902386), 2e-18 96.9 74.52 0.267950963222417 XR_250273.1 LOC101928012 PREDICTED: Homo sapiens uncharacterized LOC101928012 (LOC101928012), misc_RNA. 2e-19 100 90.91 0.131348511383538 0 noncoding 0 0 0 0 -2.00871971626811 0.00375592395169662 -0.0382750621832079 0.47932940296462 GGTTATAGGTTTATTAAATTGCAGTGAGAAATTGTATATTTGGAATATTTGGAACCTGACTTGTTTCAGCACAAAAGGGTCTTATTCACTTCATTAATATTTAATCGAAGAATCATACTGAGCTATTTCCAGACTCTGAGTGGAGGGAACATGGTACTGCCTTCCCAGTGGAATTCTGATTAATGCACCATCTCTGTGGTCCCTGAGGATCACCAACTTCCTCATCCCCCAACTATACATATTTATTCTGTGGAGAGGGAGGCAGAAAGTTGGAGAAAGCCTCACTAGGTAAAGCTTGTCATTTACATTTGCTGTTTTACGAACGAGGAAACTGACTTCCGGTTCAAGATGGTGGAGTAGAAGGACATGTGCTCATCTCCTCTTGTGAGAGCAACAAAATTCCGACTAGCTATGGGACAACCATCGACAGGAGGACGCTGGAACCCACCACAAAAAGATACCCCATGTCCAAAGATGAAGAAGCCGCAATGAGAAGTAATGTTGGCTGTAAATATGAAATTTCTTCCACACACCAAGATTTTCAAGAATGGCATATTCTCAATGCAATATG TCONS_00184103 TCONS_00184103 TCONS_00184106 TCONS_00184106 s 5' 0 TCONS_00184103 TCONS_00184103 TCONS_00184106 TCONS_00184106 s 5' 0 EMBV3_20083 TCATCCTGCGTAGCTACCAAGAGGAGGAGGCAGACAGCGCCATCAAAGCCATGGTGACGG Variant GeneID:504647|RAD9A:NM_001014848:503_cdna 659^774 2 EMBV3_36267 GeneID:504647 29 GENE RAD9A NULL RAD9 homolog A (S. pombe) EMBV3_02987 GGAGTCAGGGTTGATTTCTGCCCATCCTCCTGATTTTAGGGTGTCTCACTGCTAAGAAGG Gene GeneID:618568|RAPGEFL1:XR_082716:286_cdna Constitutive 0 NULL GeneID:618568 19 GENE RAPGEFL1 NULL Rap guanine nucleotide exchange factor (GEF)-like 1 EMBV3_41345 TAAGGTTGAGACCAGATGAGAAGGATGGACCCCAAAAATCTGGGCTCTTGGCCCCAATGA Gene GeneID:508932|IL11RA:NM_001034339:10_cdna Constitutive 0 NULL GeneID:508932 8 GENE IL11RA MGC128492 interleukin 11 receptor, alpha EMBV3_19468 GGTGCTTTTTCAACTTTCATCGAGTCAAGTATGTTCATTGTCTGTCTATTACCTGAAGAC Gene GeneID:517422|REV3L:XM_002690110:112_cdna Constitutive 2 NULL GeneID:517422 9 GENE REV3L NULL REV3-like, catalytic subunit of DNA polymerase zeta (yeast) EMBV3_33047 CCCTAACACAGAGATGTCTTGGGATAAAGAGGGTAAATATGCAATGGCCTGGGGCGTGGT Gene GeneID:510252|LACTB:XM_002689005:41_cdna Constitutive 0 NULL GeneID:510252 7 GENE LACTB NULL lactamase, beta EMBV3_19156 TAAGACTTCACCTTCCAATACCGGGAGTGTGGGTTTTGATCCCTAGTCACATGCCTCCTG Gene BVV0102_101544 + 0 NULL GK000009.2:50228920-50515450 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38569 CAACATTCCAGCCTGCCCTGTGGGGAGCCTACTCAGCAATTTGTGGGGAAATTGAAAATA Gene GeneID:317659|DNAJC6:NM_174836:19_cdna Constitutive 2 NULL GeneID:317659 3 GENE DNAJC6 NULL DnaJ (Hsp40) homolog, subfamily C, member 6 EMBV3_26655 TATTTACGCTGGAAAGAAGAGATTTGGAGCAATGGGGCCCTCAGCGTGTCAGGCAACATG Gene GeneID:513865|TMC5:XM_002697978:35_cdna Constitutive 0 NULL GeneID:513865 25 GENE TMC5 NULL transmembrane channel-like 5 EMBV3_28227 CAGACCTTCCCACACATAAAGTTACCAAATTCTGTACTAAATCAGTGACCTGAGATTGCC Gene GeneID:540509|RGS5:NM_001034707:338_cdna Constitutive 1 NULL GeneID:540509 3 GENE RGS5 MGC127135 regulator of G-protein signaling 5 EMBV3_04067 CCTTTTCCCTAGATTTTAGTAGGGAGTTGGTTTCTGTTCATCTCTTTGGGTGCTGTGGTG Gene BVV0102_095994 + 0 NULL GK000001.2:18928470-18950609 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002978 1 XLOC_000755 Coding TCONS_00002978 XLOC_000755 Coding Coding CXADR 1:18947231-18993600 = TSS1539 5627 1 TCONS_00002978_5 365 0.024524613470766 7 0.878795721187026 1.50791385440342e-05 1.11454871461315e-05 7.44178435089249e-12 1.15148551749125e-05 3.7799276242896e-05 4.04694578783703e-05 2.95092371077836e-05 9.82197504549346e-06 5.23685894055363e-05 0.00303235847415847 0.0016451172643276 0.00151729440484716 0.0004921992138041 0.0017883173841384 0.000830152775412074 0.00649213108324513 0.00205352199103175 0.00503618975840574 2.38108461881016e-05 5.96653438346622e-05 0 0.00286150756131777 0.00213452501970093 0.00423008077552851 1.10223685069998e-14 5.90090532315763e-06 3.25880725636253e-06 0.00113121843949992 0.0007891391302174 0.00160149931231836 XM_005201148.1 CXADR PREDICTED: Bos taurus coxsackie virus and adenovirus receptor (CXADR), transcript variant X1, mRNA. 0.0 9452 100.00 0.931224453527635 NM_001338.4 CXADR Homo sapiens coxsackie virus and adenovirus receptor (CXADR), 0.0 2969 79.15 0.618624489070553 TCONS_00002978_5 sp|Q8WMV3|CXAR_BOVIN CXAR_BOVIN Coxsackievirus and adenovirus receptor homolog; 0.0 753 100.00 0.997260273972603 5 coding 0 0 0 0 -0.0567133011661549 0.661171193643522 0.0367008260103741 0.64872671399412 TCCCGAGCTCACCGAGGCAGGAGTGCTTTCCCGGGAGGGTTCCCGGGGCTCCGCGTTGCCATAGCAACCCCACGCACCCGACGGGGACGGCGCGGGCTGCCTGGGCTTCGCTACTACCGGAAGTGACGTATTTCACCTGCCGAGCGAGGGCGGGGTGGGACCGGGCTGCGAGGTGCGGCCGTCGCCAGCCAGTCGGGAGCTCGCGAGGAGACGGGAGACTGAGACCCCGGGGTGAGAGCCGCCTACCTGCCGTTGTCTCCCACGGCCGGGCCGCCACCATGGAGCTTCTGCTGCGCTTCTTGCTCCTGTGCGGAGTGGCGGATTTCACCAGAGGGTTGAGTATCACTACTCCTGAACAGATGATTGAAAAGGCCAAAGGGGAAACTGCTTATTTGCCATGCAAATTTACCCTGGGTCCGGAAGACCAGGGGCCTCTGGACATCGAGTGGCTGCTGTCACCAGCTGATAATCAGAAGGTGGATCAAGTGATTATTTTATATTCCGGAGACAAAATTTATGATGACTACTATCAAGACCTGAAAGGACGAGTACATTTTACAAGTAATGATCTCAAATCTGGTGATGCTTCAATAAATGTGACAAATTTACAGCTGTCAGATATTGGCACATATCAGTGCAAAGTGAAAAAAGCTCCTGGTGTTGGAAATAAGAAGATTCAGCTGACAGTTCTTGTTAAGCCTTCAGGTATACGATGTTATGTTGATGGATCAGAAGAAATTGGAAATGACTTTAAACTCAAATGTGAACCAAAAGAAGGTTCACTCCCACTACGATATGAATGGCAGAAGTTATCCGACTCACAGAAACTGCCCACCTCTTGGTTACCAGAAATGACATCACCTGTTATATCTGTGAAAAATGCCAGTGCCGAATACTCCGGGACATACACCTGTACGGTCAGAAACAGAGTGGGCTCTGATCAGTGCCTGCTGCGCCTGGATGTCGTTCCTCCTTCAAACAGAGCCGGGACAATTGCAGGAGCTGTTATAGGAACTTTGCTTGCGCTTGTGCTTATTGCTCTTATTGTCTTTTGCTGTCATAAAAAGCGCAGAGAAGAAAAATACGAAAAGGAGGTTCACCATGATATCAGAGAAGACGTGCCTCCTCCCAAGAGCCGTACGTCCACTGCCAGAAGCTACATCGGCAGCAATCACTCATCCCTGGGATCCATGTCCCCGTCCAACATGGAAGGATATTCCAAGACTCAGTACAACCAGGTGCCAAGCGAGGACTTGGAACGCGCTCCTCAGAGTCCGACGCTCCCACCCGCCAAGGTAGCGGCCCCTAATCTCAGTAGGATGGGGGCGGTGCCTGTGATGATTCCAGCGCAGAGCAAGGACGGGTCCATAGTGTAGAGCCTCTGTGCCCGTCACCCATGCTGTCCTCTGGAAATATGAACATCCGTACATTTTGCTACCAGCCTCAAAATAGGTGAAAAAAGAAAAGCTAACCAAAAACTGTAAGAAAAAACATCAAAAAGTTTTGTTTGGTTATACTGAAATAGTAAAGGCATTGAAGTTCTGAGGAGATTCACTATCTAAATAATATTTCCTTTAAGAGCTTGACTTTATAGGTTTCTGAATATCAATACTTAAGTCAGATGTGGCACTTTGAATATGAAATCAGAGGTGAAGAAAGAAATTGGTGAACTTTGGTGCACACCAAGTTGATACTTGAATCATCTGAAATTTCTGCCATTGTCTTCAGATTGCTTTTTTTCCACGTAATTTATGTGACCCGATAGTGTTCCCCTAACCCCTCAAAATCGGTAAAGAAAGATTCATGGCAAAAAGACTTAGATGCATTTATGTTTGTTCTTGTTTTCACTTCTTTGAAAGCTTTGTGTTTGAAATGTCTCTAATAACTAGGAAACACTACAGGGTTCTAGAAATCACCTAGTTCCGTGTCATTCATAAGCCTTGGATATGAAATGACTTCTTAAGTATTTAATGGATAGATTGCTGTGGGTGGCAGGGACATAGTAGGCTCTTTGGTATGCTAAATTAAAGGAGCATTTATCTGATTCGTTTAGAAAATTTGCTGTTACCTGTATACAGTGATGATACTCGTGGTGCAATAGTGAGGAGAGGATGGATTTTGTTGATTAATGTTCCAGTGCCCCGAGGCCTGTGGTGGTCTGCAGAACAGTGGCCTGTTAACAAAAATGTAGAGTATTTTGCAGTTGCCAAGTAAATGCTGGCCCTGCGCTTTAGGTGATATTTTCCTAATAAGAAAAAAAATTATAACTCATTTATTGTTTGGCAATTACAGATTGTCATTCTCTAAATTATTGGTTCTAAATTGAAGAATTTTTTGTTTTCCTGGTTCGGTTCTTTTGTGTTTGTGATGGTGTTGCATAGTATATGTTCTAGAAAGGTAATCTGAAATTTACCCTCTTGAATGCAGTTCCTGGAGGATATTTTCTTCATAGACTTAGAATGATGAACTACATTTTAAACTAGTAAGTGTCCTCTGTCAATTCTGTATTTCAGACTTGGGAGGATGTACAGTTGCTATTGTATGGCCAACATGTCTTGTGTAGTTTCAGAAAATCAAGTTGAGCTTGGAAAAGTTTGTCTTAGTTTTGTGGAAGTGACTTAATCTTTTTAAAAGAAAAAAAGAGAGAGAGAAATGAAAGGAAAAGGAATTAGAAAAATACTCCTACTGCCAAATGTGTTAAATACTGTTTTAGTAGATGAAAGTGAATTTATTGTATTTCCCTTAAGATTGTGAGGGAGTGTGGATTTAGTAGAATGAGCCAACAGTTTCTTTATAGTAATAAGGTCTGCAATAAATTATTTCACTAGCTCTAAAACCTTTTCCCTAGATTTTAGTAGGGAGTTGGTTTCTGTTCATCTCTTTGGGTGCTGTGGTGGTAAATGCTACATTATACATTAATGTTGGCATGTATTTATGATTAGACAGAGTATTGTATACATTTTTTAATGGCAAATTAAAGCTGAATGTGTAATGGATTCGTGTATAGTTTTACATATTTGGAAGCATTTTTAACATAGGTTTTTAACGTTACATAATGTTGCTTTTATACTTACGTTAACATTTTCATCCGTGCCTTTTGGGTAATTTAGTTGTATTATGAATTTCTGGTGCCTATGAGCTAGCTATCACCTGAAAGGTGCTTAGAGGTGAAGGTACTGGTCCTGGAAATGCATCACTGTGATACCTATCTATCTTCATACCTTCAGTCTTGCCTCTTCCTGTTCTTTTTGGATACAAGGTAACTGATTGTGTTACTCATATAAAGTTTTTAAAATGTCAACATCCCCTACACTCTTTGACTGTGTTTCTGATTTTATAATAATAACTATTTTTGAATATCAGAGCTCTGATCTGTTTTATATGAATAAAATATATAAGGTATTATAGAAGTAAATAACCAAGCACAGACATTACTAATAAGAATTTTGGTCCTTCCTGGTCCCAGTTTTGTAATGAAAAGTATGCTATCAGTATAAGTAGAAATCCCTACAAAAAGTGGACATATGTAAGGCTTTCCTTACCTTAGACTTTGTAGTTAATCTGGGGTTTGGCTGTAGAATCTCTTCCAAAAGTGCTTTTCAGGCAAGAATCTTGGAGTGGTTGCCATTTCCTATTCCAGGGGGTCTTCCCTACCCAGGGATCAAATCCACGTCTCTTGCGTGTCTCCTGCGTTGGCAGGTAGATTCTTTACCTCTAGTGCCATCCGGGAAACCCCCCATTGTTTTCTCTTCCCTTAGACTTCGCAGTTAATCTATGATTTGGCTGTAGAGTCTCTTCCAGAATGCTTCCTTCCAATTCAGGTCCATTACCACCTACAGCCTGAGAAACAAGCTCAGGAAAAAAGGCCACTGTCATGACCTCAAGAGACCTGTTAGATGTGGTTGAGTTTAGAGGACAGAACTCAGTTTTCAGTTTTTATCTCCAGCCACTTGTACATTTCAGTGAATCCAAAAGTCAGATAGTACTGGTAACTTCCTAAATAATTCTGACTGAGAGTTTCCACTGAACTAGAGATCAAAGATGTGTTCTAGAATTACTGTTGGTAATCATCAAGCAAGTCAACAAAAGATTATTATTCAAGCATTTTGAAACATCAGTCAAGGACAGCACTGAACCATCAAAGCAAGGCTGTTCTATTCCACTTTGTACCTAAGAGATTGACACCGTATTTTTGAGTTAGTTGGGGTAACTTTAAAAGAAATATAGAGGTTATAATTCTGTATTGTGAATATGTAGGTTACAGGTGTTTGTTTTCATATGGCAACCTTACTAATATTTCCCTGAATGGAGATCAAAAGCAAAATTTATTAAACTGGCCAGTTATTCCAGGCAGATAACCTTTAAATTTGGGCTGTCATGGAGTTGTTACAATGGAAACACAGACTGAGGGTGTCTTATAGGGAGGTTAATTCAAGAAACACGATTAGATTATTGGTATGAAGACATGGTTCTTACTAAAAAGATGATTTTTAGGATTGAGTTCTGGAAATTTGTAGCAGGTGAAGGGGCAGATAAGACAATTTGATTAAATATGAAAAGAATTCATTGCATGAAGTTGGATATCCAGTCCTGTAATGTATGGCTTCTTAACTATTCTGTCTTTCTGTGTGCGTGCAGCATGTAAATTTGAAGTTATATAAACGTTGAAAGTTTTTTTCTAATCTTTTTTCATCTCCATAGTGTTTAAGGCTTTCAGATGGCCTTATTCCAGTGTGCAAAGAAAAAAATTTCATATTTTTTGTGGTTAATGCTTTGATGTGTCATGTAAGGAGTAGTTTGTAGAAAATGTTGGCACAATTTTAACTTTTTAGTGGCTTGTGACATATTATATATATGTGTATATTATATATATCTTTATAATATTTCTGTGTTTAGTAGTAGAAATGTTCTGGGCAAGTTTTAATATTTCAAATGCCTTTGGATATTCTTGCAATAAAGGCGACGTGTTCTGTAGTTAGACCTTTTTTACTCATTTGACACTAAAATGGTTCATAACTGAGCACAAATTCTACCTAATAGAAATAGGAACGAACAATGTATACATTGGTGAATTGTGGTTCTGTTTGTCTTATGAAAGGTAACACCAACACACGTTTGTTGTTTTGGCTTCTCACTGTTAATTAAAATCTAGTTTTGCAAAATATCCTAGTTAATGATTTCAGAGTGTGGTAAATGTCAGTCGAGTTTGGTTTAGACCTCAAACACTAAAAGCTCCAAAGAACTCTGTTTTCTACTAACTTATTTTATGACACAAGCATTGAGAGAGCCACAGTTCACTGATTGTCCTGTTCTCATCCCTAACTGTGAATTGTTGTGACAAATGTACTACTGAGAAGAAATATTTTGACACTTCACACATGCAAGTAGAGAACTGCGAGTGTCAGTTTCAAAAATGATTTTTTTGTATTTCAAGTTTCTGGCTTAAATATCCAATGGTGCAGATTTTGAAATTTGTAAGAACAAAGTTTGGTTTGAAAAAAGCCAAAAACTTGCTCTAGTTTTGTGACTTTGTGTACTTTGAAAATAAAATCAAGAAAGCAATGTTTTGCCTCATGGTGTGGCTTCATTGTGCCTCTTATTTAAAAAAAAAAAAAAAGTCTACTTTA EMBV3_31513 GGCAATATTGGGAGATTGGTGGGCTTGTGATACCTCATGTGGCTGAGTTTCTATAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_23702 CGATAGTCGGAACGGGTGACTGACTTCTCCAAACCCAAGGAGGAACCCTAGATAAAATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31937 CCTGAGGGAGTGACCCTAGAAGTGTTAGAGGAAGCTCTTGTAGGAAATGACAGTGAAGGC Gene BVV0102_038995 + 0 NULL GK000021.2:45522304-45607527 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121365 TCONS_00121366 TCONS_00121360 TCONS_00121367 TCONS_00121368 TCONS_00121361 TCONS_00121363 1 XLOC_073394 Coding TCONS_00121368 XLOC_073394 Coding Coding BAZ1A 21:45536723-45596594 = TSS90430 4809 1 TCONS_00121368_5 1432 26 0.920110238850844 0.00635610159893525 0.00500469075702083 0.00396221821375466 0.0025284694159409 0.00283057409419607 0.0011498733936647 0.00221652908667797 0.00270130888543477 0.00248052977262634 0.00548948498440776 0.00264771497211237 0.00195172084885081 0.000679594740780835 0.00180428845072091 0.000670418556786082 0.0122887573627001 0.000429050576236492 0.00328217023723467 0.00821544065900551 0.00726461180802 0.00166597110091606 0.0054429633928971 0.00351174714602556 0.00362965796565874 0.00800033440825863 0.00624222290992799 0.0037068110691126 0.00197356254233836 0.00129586849278557 0.00167627991017162 NM_001192940.1 BAZ1A Bos taurus bromodomain adjacent to zinc finger domain, 1A (BAZ1A), 0.0 8628 99.94 0.996257018091079 NM_013448.2 BAZ1A Homo sapiens bromodomain adjacent to zinc finger domain, 1A (BAZ1A), transcript variant 1, mRNA. 0.0 6904 91.94 0.996257018091079 TCONS_00121368_5 sp|Q9NRL2|BAZ1A_HUMAN BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A; 0.0 2489 93.50 0.998603351955307 4 coding 1 1 1 1 0.0118561154805521 0.917476302287963 0.0458758834994861 0.444137123741964 TGCTGTGCGGGAGACCTGTCATTATGAACATTGGTGTAAGATTACAGTGTAGGATTTTGGAAGTCCTTCCTCCGTCACACCAGAATGGTTTTGCTAATGGGCATGTCAGCAGTGTAGATGGAGAAACTATTGTCATCAGTGATAGTGATGATTCAGAAACACAAAACAGTTCTTTTCAAAATGGAAAGAAAAAAGATGCAATCGATCCCTTATTATTCAAATACAAGGTGCAACCCACTAAAAAAGAATTGTATGAGTGTGCTATTGTTAAGGCAACACAAATCAGCCGGAGAAAACACCTATTTTCTCGTGATAAACTAAAGCTTTTTCTGAAGCAACACTGTGAACCACAAGATGGAGTCATTAAAATTAAGGCATCATCTCTTTCAACATATAAAATAGCAGAACAAGATTTTTCTTACTTCTTCCCTGATGATCCACCCACATTTATCTTCAGTCCAGCTAACAGAAGAAGAGGGAGACCTCCCAAACGAATATCTGTTAGTCAGGAGGACAGCATTGCCAGTAAACAGACTATTGCAGGCTATAGGAACAAAACTACTAAAGAAAGAGACAAACTTTTAAAACAAGAAGAAATGAAATCACTGGCTTTTGAAAAGGCTAAATTAAAAAGAGAAAAAGCAGATGCCCTAGAGGCAAAGAAAAAAGAAAAGGAGGATAAAGAAAAAAAGAAGGAAGAATTGAAGAAAATTGTTGAAAAAGAGAGACTGAAGAAGAAAGAAGAAAAAGAGAGGCTTAAAATAGAAAGAGAAAAGGAAAGAGAGAAGTTGCGTGAAGAAAAGAAAAAGTATATGGAATACTTAAAACAGTGGAGTAAACCCAGAGAAGATATGGAATGTGATGACCTTAAGGAACTTCCAGAACCAACTCCAGTGAAAACTAGACTACCTCCTGAAATCTTTGGTGATGCTCTGATGGTTTTGGAGTTTCTTAATGCATTTGGGGAGCTTTTTGATCTTCAAGATGAGTTTCCTGAGGGAGTGACCCTAGAAGTGTTAGAGGAAGCTCTTGTAGGAAATGACAGTGAAGGCCCACTATGTGAATTGCTTTTTTTCTTCCTGACTGCCATCTTCCAGGCGATAGCTGAAGAAGAAGAGGAAGTAGCCAAAGAGCAAATAACTGATGCTGACACCAAAGATCTAACAGAGGCTTTGGATGAAGATACAGACCCCACAAAATCTGCACTGTCTGCAGTTGCATCTTTGGCAGCTGCATGGCCGCAGTTGCATCAGGGCTGCAGTTTGAAAAGCTTGGATCTCGATAGCTGCACTCTTTCTGAAATCCTCAGACTACACATCTTAGCTTCGGGTGCTGATGTAACATCAGCAAATGCGAAGTACAGGTATCAGAAACGAGGAGGGTTTGATGCTACAGATGATGCTTGCATGGAGCTTCGTTTGAGCAACCCCAGCCTGGTGAAGAAACTGTCAAGCACTTCAGTGTATGATTTGACACCAGGAGAAAAGATGAAGATACTTCATGCTCTCTGTGGGAAACTACTGACCCTAGTTTCTACTAGGGATTTCATTGAAGATTATGTTGACATATTAAGACAAGCAAAACAGGAGTTCCGGGAGTTAAAAGCAGAACAACATCGAAAAGAGAGGGAAGAAGCAGCTGCTAGAATTCGTAAAAGGAAAGAAGAAAAACTTAAGGAGCAAGAACAAAAAATGAAGGAGAAACAAGAAAAACTAAAGGAAGATGAGCAAAGAAATTCAATTGCAGATATATCTGTTGGGGAGGAAGAAAGGGAAGATTTTGATACTAGCACTGAGAGCAAAGAAATAGAGCAAAAGGAACAAGATCAAGATACAGTTTCTGAAGATGAAGATGACCCGGGACCACATAAAAGAGGCAGAAGGGGAAAAAGGGGACAAAATGGATTTAAAGAATTTACAAGGCAAGAAGAGGTCAACTGCATAACAAGAGAGCCTCTTACTGCTGAGGAGGAAGAAGCTTTAAAACAGGAACACCAACGAAAAGAGAAAGAGCTCTTAGAAAAAATCCAAAGTGCCATAGCATGTACCAATATCTTTCCCTTGGGCCGTGACCGCATGTACAGACGGTACTGGATTTTCCCTTCTATTCCTGGATTGTTTATTGAAGAGGATTATTCTGGTCTCACTGAAGACATGCTGTTGCCTAGACCTTCATCATTTCAGGATAATGTACAGTCTCAAGCGCCTCAGGTATCCACTAAAACTGGAGATTCATTGATGTCTGAATCTACCTCCAGCATTGACCACGGTCCGTATGATGATACTGTGCAGCTGCCAAAACCGGTGCATAAGCCAAATCGGTGGTGCTTTTACAGTTCCTGTGAACAGCTGGATCAGCTGATTGAAGCCCTTAACTCTAGAGGACATAGAGAAAGTGCCTTAAAAGAAACTTTGTTGCAAGAGAAAAGCAGAATATGTGCACAGCTATCCCGATTTTCTGAAGAGAAATTTCATTTTTCAGACAAACCTCAAACTGATAGCAAACCTACATATAGTCGGGGAAGATCTTCCAGTGTGTATGATCCATCCCAGATGTCTGCAGAAAGACAGCTTGAGTTGAGGCTGAGAGATTTTCTTTTGGATATTGAAGACAGAATCTACCAAGGAACATTAGGCGCAATCAAGGTTACAGACCGACACCTCTGGAGGTCAGCATTAGAAAATGGACAGTATGAGCTGTTAAATGAGGAAAACAAGGAAAACGGGATAATTAAAACTGTGAATGAAGATGCAGAGGAGATGGAAATTGATGAGCAAGCAAAGGTCATAGTAAAAGACAGACTTTTGGGCATAAAAACAGAATCTCCAAGTACTGTCTCAACCAATGCAAGTACACCACAGTCAGTGAGCAACGTGGTTCATCATCTTGCAATGGCACTTTTCCAAATAGAACAGGGTATTGAGAGGCGTTTTCTAAAAGCTCCACTTGATGCCAGTGACAGTGGGCGTTCTTATAAAACAGTCCTGGACCGTTGGAGAGAGTCTCTCCTTTCTTCTGCTAGTCTATCCCAAGTCTTTCTTCATCTCTCCACCCTGGATCGTAGTGTGATATGGTCTAAATCTATACTGAATGCCCGTTGCAAGATCTGCCGAAAGAAGGGTGATGCTGAGAACATGGTACTTTGTGATGGCTGTGATCGGGGCCACCATACCTACTGTGTTCGACCAAAGCTCAAGACTGTGCCTGAAGGAGACTGGTTTTGTCCAGAGTGTCGGCCAAAGCAGCGTTCTAGAAGACTCTCCTCTAGACAGAGACCATCCTTGGAAAGTGATGATGAGATGGAAGGTAGTATGGAAGGTGAGGATGATGAAGTTGATGATGATGAAGAAGAGGGTCAAAGTGAAGAGGAAGAGTATGAGGTAGAACAAGATGAAGATGATTCTCAAGAAGAAGAAGAAGTCAGCCCACCAAAACGAGGAAGACCACAAGTTAGATTGCCAATTAAAACAAGAGGGAGACTGAGCTCTTCTTTCTCAAGTCGTGGCCAACGACAAGACCCTGGAAGATACACTTCACGGAGTCAGCAGAGTACGCCGAAAACAACTGCTTCTTCTAAAACTACTGGTAGAAGCCTAAGAAAGATAAAATCTGCTCCTCCTACAGAAACTAAATCTTTAAGAATTGCCAGTCGTTCTACTCGCCAGAGTCATGGTGCACTGCAAGCAGATGTATTTGTGGAACTACTGAGTCCTCGTAGAAAGCGCAGAGGCAGGAAGAGTGCTAATAATACACCGGAAAACAGTCCCAGCTTCCCTAACTTCAGGGTGATTGCCGCAAAGTCAAGTGAGCAGTCAAGTCCTCTAAATGTTGCTTCAAAACTTTCCCTCCAAGATAGTGAATCCAAGAGAAGAGGCAGGAAAAGACAATCTGCAGAATCATCCCCTATGACACTTAATCGAAGGAGTTCAGGTCGACAGGGAGGAGTTCATGAACTGTCTGCTTTTGAACAACTTGTTGTGGAATTGGTACGGCATGATGACAGCTGGCCTTTTTTGAAACTTGTTTCTAAAATTCAGGTCCCAGACTATTATGACATCATCAAAAAGCCCATTGCCTTAAATATAATTCGTGAAAAAGTGAACAAGTGTGAATATAAATTAGCATCTGAGTTTATTGATGATATTGAATTAATGTTTTCGAACTGCTTTGAGTACAACCCTCGTAACACAAGTGAAGCAAAAGCTGGAACTAGGCTTCAAGCATTTTTTCATATTCAGGCTCAAAAACTTGGACTCCATGTCACATCTGGGAATGTGGATCAAGTTAGCACACCACCGGCTGCAAAAAAGTCACGAATCTAGTTTTGTCCTTCTGAAGGATATGAAGAAATCAAATTGTTCATGAAAATGGAACATTAAATCATGCTCTAAAGCAGACATATATGTATAAAGCAATAACAGCTGATTGACCACATTGAAGTGTGGCCTGCACTATATTCTCAACTTTAATATTAAGCACTCAGGAGAATGTAGGAAAGATTTCCTTTGCTACAGTTTTGTTCAATATCTAATAAGTTTGATATATGTATTGGATACAGTACTGGTTTACAGAGGTTTTTGTACATTTTGAGATCATTCATGTGTCCCAATATCTCAGAAAATATTTTTCCACCTATGATTTATTTTGTCATTGATCTTTTTTTAGAAGTGTGGTATTAAGGGAGATTTATCTACACAGAAAAATCTTCCATTATAGCACAGATTAGGAAAAAGTATATACATCTAAGAATTGTTTAATGAGCACATTCTTACAACACTACACATGAATGAATCCAATTTTATATCCTTG EMBV3_19992 GGCTGAGTTGGTGGATGCTCTCCAGTTCGTGTGCGGAGACAGGGGCTTTTATTTCAACAA Gene GeneID:281239|IGF1:NM_001077828:890_cdna Constitutive 0 NULL GeneID:281239 5 GENE IGF1 IGF-1 IGF-I insulin-like growth factor 1 (somatomedin C) EMBV3_17724 TCGGAGAACTGTCTCAGTGACTTCACTTCATAACAGGTTAAAAGATGGTAAGCCACCTGG Gene GeneID:504415|CHL1:XM_002696954:90_cdna Constitutive 2 NULL GeneID:504415 22 GENE CHL1 NULL cell adhesion molecule with homology to L1CAM (close homolog of L1) EMBV3_33994 ATATGGAGGGCAGACTGTAAGAAAGTTGAGCGTATATTCACTGAGCCCCCGCTCCGTGCA Gene BVV0102_290061 + 1 EMBV3_37586 GK000018.2:53425730-53432741 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23751 CTAGTATGGCTGCGGATCCCTGGCCTGGGTTTTTCTATCAGATGATCCATCGTAATAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33886 TAGTTTGACCTCACAGTGCCCTTCCCCATCAGTGCTGCAAACACCAACCTGCCTAATCTC Gene GeneID:281665|CCKBR:NM_174262:7_cdna Constitutive 0 NULL GeneID:281665 15 GENE CCKBR MGC137600 cholecystokinin B receptor EMBV3_21310 TAAGCCCCTGCCTGTCCACCAGCCCCTAGATCTCCTGCTTGACACCGATTTACTACTTGA Gene GeneID:505991|CHAC1:NM_001098882:121_cdna Constitutive 0 NULL GeneID:505991 10 GENE CHAC1 MGC159919 ChaC, cation transport regulator homolog 1 (E. coli) EMBV3_31878 GTCTGGAGGGGGTCCTCTACCTGCTGCTGGCCCTGATGCTGTGTCACGCGCTCTTCACCA Gene GeneID:100335578|LOC100335578:XM_002692391:313_cdna Constitutive 0 NULL GeneID:100335578 13 GENE LOC100335578 NULL hypothetical protein LOC100335578 EMBV3_38660 TGGGAGAAGACACGTCCACTTCTATCCTGGGTCCAGCTGTTTGCTAAGAGACAGAGTTAG Gene BVT0102_444621 + 0 NULL GK000023.2:47032248-47219513 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09950 GTGAGTTGCTGTGAGCTGGGTGTTAATCCTGATCAAGTGGAGAAGATCAGAAAGTTACCC Gene GeneID:522429|ANKRD40:NM_001101109:109_cdna UTR3_Alt 2 NULL GeneID:522429 19 GENE ANKRD40 NULL ankyrin repeat domain 40 EMBV3_17875 GAGATATCCTAGTCAGCCTGAAGGAGACACAGTGGACCTGGTCAAGAAGCTCTTCCTCAA Gene GeneID:539117|NAGLU:NM_001102226:186_cdna Constitutive 0 NULL GeneID:539117 19 GENE NAGLU MGC157257 alpha-N-acetylglucosaminidase EMBV3_17049 GGCAAGAGCCTGATTCATACCCCTCAGAACCTATCTTTGTTTCTCACCCAGATGCCTTGG Gene GeneID:282043|RPE65:NM_174453:7_cdna UTR3_Alt 2 NULL GeneID:282043 3 GENE RPE65 NULL retinal pigment epithelium-specific protein 65kDa EMBV3_11128 CAGCATGCAGCCCACGCTGCTCGACATGGACATGGAGGGGCAAAGCCAGGACAGCACAGT Gene GeneID:781037|MAP3K10:XM_002695060:416_cdna Constitutive 0 NULL GeneID:781037 18 GENE MAP3K10 NULL mitogen-activated protein kinase kinase kinase 10 EMBV3_04557 TTCTAGATACAAAGAACAGTGATACTGAACTCTTACGCACTTGTGGCTCTGTTGAGAGCC Gene BVV0102_083065 + 1 EMBV3_05067 GK000028.2:5714663-5836935 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38297 GACTCGTGAGCCGACCACTGCCACTCCCGTGCTTCTCATTAAGCCCCAATGCACAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12495 TCAGTCATTTTCAGACTCCTTTGAACAGCAACTGTGCTTTAGAACCAAACGTTCCGTCTC Gene GeneID:507217|LNP1:XM_002684709:38_cdna UTR3_Alt 3 NULL GeneID:507217 1 GENE LNP1 NULL leukemia NUP98 fusion partner 1 EMBV3_06126 CAAGCAGCAGTAGAAACAAATGCACTTTTCAGCCCAAATCCTCCCACTAGCATGTCCGGC Gene GeneID:511690|ST6GALNAC2:NM_001075533:380_cdna Constitutive 3 NULL GeneID:511690 19 GENE ST6GALNAC2 MGC139669 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 EMBV3_15779 TGGCTTCCAAATTGTCCGAGGAGACCTCCGTCACATCAGTGCCCCAAGGGAGCTTGCAGA Gene GeneID:533029|GMIP:NM_001083465:50_cdna Constitutive 0 NULL GeneID:533029 7 GENE GMIP MGC142320 GEM interacting protein EMBV3_18412 CACTCTGCCCTTTGGGAGGTTCTCCCTGTCCATTACTAACTTGGACCATATCTGAAGAGG Gene BVV0102_158576 + 0 NULL GK000020.2:10399141-10407092 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114501 TCONS_00114502 TCONS_00114503 1 XLOC_069302 Coding TCONS_00114502 XLOC_069302 Coding Coding CENPH 20:10405110-10425988 = TSS85395 3303 1 TCONS_00114502_1 244 0.273993339388435 9 0.84221870958471 0.00247489445936009 0.00134068049652078 0.00182617533073138 0.00159147833692423 0.0016552484040341 0.000846012071823021 0.00193983679810505 0.00105699718724804 0.00266242488437884 0.000286031621455309 8.18210913316915e-15 6.7701612232199e-19 5.52500436433714e-05 0.000224083093730965 0.000773321645256712 0.00115649555208848 0.00132612864630867 0.00221367172316287 0.000395919043654022 0.00235294150061293 0.000562434095589214 0.000492764715537807 0.000294369081420305 0.00155966206742655 0.00200594382810185 0.00156314373995311 0.00146146183030681 0.000146051405225772 0.000188963057698338 0.00020151335277468 NM_001034236.2 CENPH Bos taurus centromere protein H (CENPH), mRNA. 0.0 2248 100.00 0.376930063578565 NM_022909.3 CENPH Homo sapiens centromere protein H (CENPH), mRNA. 0.0 942 84.40 0.255828035119588 TCONS_00114502_1 sp|Q3T0L1|CENPH_BOVIN CENPH_BOVIN Centromere protein H; 6e-173 481 100.00 0.995901639344262 1 coding 1 0 1 1 -0.238221726816496 0.21382952648211 -0.0335846249259307 0.507307670859836 GGCAACCAGAGACGGGGGGGAGGAAAGGGCGGGGCCATCAGGCGGAAGGGGTGTGACCGCGCGCGAAGACCCTCCGGCTGGTTCCGGGTATCAATTTTGTGGCGGGAAAAACGGTCCCTTCTGTGGTAGAGTCCGCCAGTCCTGAGTAGTAACTCTTCGCGCCCGGAATGGAGACGCAGTCCGAGGAGCAAGCCGTCACCAAGCCTGCGGACTCCGGAGGGGAAGGCGGGCCGCCGCAGGTCGCCGGCGCCCAGGCGGCGCGTCCGGAGGACCGCATGACCCTGCTGCTCAGGCTAAGAGCACAGACCAAACAACAACTCTTGGAATATAAGTCAATGGTTGATGCAAATGAAGAAAAGACTCCAGAACAAATCATGCAGGAAAAGCAAATTGAAGCTAAAATTGAAGAACTAGAAAATGAAGTTGAAGAGGCAAAAACTGCTTTTGAAATGAAAAAGCTTGCATTAGACAGGATGCAACTTTCAACTGCACTTAAAAAACACCTGGAGAAGGTTGACATTAAGACTAGTGTGCTCATGGATAACATGAAACAAATACTAAATCTGAATAAATTAATAATGAAATCACAGCAGGAAACTTGGGATTTGGAGGAAAAATTGCTTGATGTTAGAAAGAAGAGATTGCAATTAAAACAAGCTTCAGAAAGAAAGCTTTTAGAAATACAGACTGAAAAGAACAAACAGAAAGATGATTTGGATAGTATGGAAAATTCAGACAAAATAAAGGCCATACAACAAAACCTGGAGACAGAGATACAGATTACTACAGTTATTCAACATGTGTTCCAGAACCTCATTTTGGGGAGTAAAGTCAACTGGGCAGAGGATCCTGCCCTTAAGGAAACTGTTCTGCAGCTTGAGAAGAATCTCACAATGATCTAACAGGAATTCTAGTTTGATATTTTTTGTTTCTGTTTTTAATGTCATTTAAAAAGAAATTTCAAGTGAAATGCTTTTCAGTGTTTTGGGAACGATTCTAATACTGCAGTTAATTTTTTTTAGCTTGAGTTAAGTGTTACATGGAATCTATTGTTTTAAATATAATAAAGTGACTGGCATAGTCTAAATCTGAAAATCTTAGCCTTGGAAGGGTCCCAAAAGACATCTAGTCCAGCCTCCTACTGAATATGGACATTTTTTCTACAGCATTCCTGGAAATCTCAGCTCCCATTTGTAATACTTCTGTGTATTTGTTTATCAACAAAATATTAGAAAGTTAGAAAAGCATATCCACACACATCTTTGTTTTTTTTTTCAACTGTCAACTGTATTTTATTCAGATAAATCTCATTTTGGTTCAACTCACTACAGATTTTTTTTTTTTGCCTTTTTTAAAAAATCGAGGGGACTTCCTTGGTGTTCCAATGGCTGAGACTCCATGCTCCCAGTGCAGGGGGCCAAGGTTCAGTTCCTGGTCAGGGAACTACATCCCACATGGCTGCAGTGAAGAGTGTGCATGCCACAGCTGAAGATCCGGCATGTGGCAGCTACGACCAGGTGCAGCCAAATAAGCAGTTTTTGTAAAAAAATTTAAAAACTGAGATATAATTGATACCTAACACTGTGTAAGTTTAAGATGTACAACATTGTTGATCTGACCACCATTAGCTAACATCTTCATCGTGTCACATAAGTATTATTTCTTTATCATGGTGAGAATATTTAAGATTATCCTCCTAGTAACTTTGAAGTGTGTAATGCATTAATTTGGAGCTGTTGATAATTTTTATAGACACTGTAGTCTTTTCAACATTATTTTAAGAAAGACTTTAAATTTGAAAAGATGTACTGCAATGGACAACAGTATTAGAAATCTGTTCTTTAGATCAGTAACAAAAATGATATTTGCCTAAATTTGAATTCTGAAAGCTTTTCTTTGGAATATTTATAGTTTGGCTTCATTTGTTTTGATAAATCATAATTTATGTGTAGCTTTTTATACGTGGTTACTCTTTTCTCCACAGTGTATTCTTGGAAATGGTCCATGTGAATTATAAAACAAGTTATATTTTTCTCATAGAAAAACTTTCTGGAAAATACTTTCCTGATCCAAAGACATGGCATTAAATGTTATCATAGATGCACACTTTATTAGTGCATCCCAACTCAAAGGATTATCACCATCCTCAGAAAAACTTCCTGCATTTTCCTAAGAGTTTATTGTCCTGTAGTGTGCTCCCTCTTAAATCCCAGCTCTGAGAAAGAAATTGTATTAGTTATCTTTCTTGGAAATCATGCTGAATAACAACCTCAAATCTCAGTGACTTACAAGAAATACATTCTCTGTTGGATCCATGGTTTGGCTCATTATCCTAGGACTCAGGCTGAGGGAGCAGCCACTATCTGAAACACATGCTCATGGCTTATGAGGCCAAGTCAAATTATGCAAGCACATTTGATTTCTACTGAGAGCAAGTGTACATATCCACCCAGGTTCCATTGACCAAGCTCAACACTCAACCTCTCTCACAGCAGGAAGTGCTGAGTTTCAGAGTAGGGGAAAGCAAATGGATATTTGCTGAAAAGAATATAGTCTACCACAGCCTGCTACCTTGGTCTTAAATATTAATTTCCCTTCTGCATGTAAAAGATGCGCCTTTCCCCAAAGATGGTAAGCCAACAATGTCACCCAGGCATACCAGTTTCAAAGAGTCTCCAGTTATGTTCAGATGGATTCTTCCTGATCTGGAGACCCTATGACCTGAAAAGACAAATGATGTTGCTTCACACAGTCAGCAAATAATGGTGACTGGGGCAATTCTGAAATACTGCTTGGCAAAGGAAGAGCCCTTCTAAGGGGACAGGGAACACCTTTGGGTTTGGCTCTTGTTCTTCTGTCAAGAAGCAGTTCTTTATCTGTGGTCCTTCACTCTGCCCTTTGGGAGGTTCTCCCTGTCCATTACTAACTTGGACCATATCTGAAGAGGGCATCAGAGATTATGCCCATCTGAAGAGCTTTCTCAATTGGGGACCGAAATATTTTACATCTCAAACACAGTCTAAAAATCCAGGCTAGTGGTGTCTTTGCTAATACACTTTTTCTCAAAAATGTGGGAGTGATGGTTGTTTTGGTTGGCTATTTCCTCATATCAAACTGATTTACCAGCTGCCTGAGTTTGTAAATAAAGTTTTATTGGAACAAAGCCACACCCACACGTTTACATATTATCTATGGCTGCCTTTCTTCTACAATAGCATATGTTGGTCCCCTGCTTATGATGGTTCAACTTAGGATTTTTCAACTCTACGATGGTGTAAAAGCTATATGCATTCGGTAGAGACC EMBV3_23848 CCCGTTTCATACTTGTTAGCATTTGCCTTACATATTGCAGTGCTCCTATGTTGGGTGCAT Gene BVV0102_037008 - 0 NULL GK000008.2:2288760-5054029 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208985 TCONS_00187064 TCONS_00020176 TCONS_00129726 TCONS_00250544 TCONS_00219681 6 XLOC_127496 XLOC_113112 XLOC_010854 XLOC_078439 XLOC_153487 XLOC_133000 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_41424 CTTAAACATTTTGACTGCCTTCCAGAAGAAGGAGGGGTAAGTTACCTTCTGGCTGTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22395 CAACATTGGTGATATTTGCTACTAAAAACCTTTTCATACAACTTACCTCATTTCAAGTGA Gene GeneID:414732|GATM:NM_001045878:27_cdna Constitutive 0 NULL GeneID:414732 10 GENE GATM MGC137972 glycine amidinotransferase (L-arginine:glycine amidinotransferase) EMBV3_35989 GGCTTCTCAGGAGGAACATGTCAGTGGATTGGGTGGCTGGAGTAGATTAAAGCAGTCATG Gene GeneID:100125232|OTP:NM_001103312:195_cdna Constitutive 0 NULL GeneID:100125232 10 GENE OTP MGC152200 orthopedia homeobox EMBV3_29690 CCCCAGTCAGGCCGATCCGCTCCGCTCACGGGTTATGTAACGAACTCATCACGAGTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20080 TTGCCATCCCGGCACGCAGTTGTTAGCTGTCTCTCTAAGTGTTGCCTGGTGTAGGTGAAT Gene BVT0102_153140 + 0 NULL GK000014.2:5026069-5154836 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051229 1 XLOC_031133 NonCoding TCONS_00051229 XLOC_031133 NonCoding NonCoding - 14:5034222-5049082 - TSS38245 14860 8 TCONS_00051229_23 99 0.0896366083445491 1 0 0.00289147789932357 0.00172635686848971 0.00274655966688289 0.00141826409545216 0.00270210663629501 0.000475470031020732 0.00133986858639437 0.00243175384091674 0.0016945517864013 0.000540246374680487 3.48153415791824e-05 7.63984905926112e-05 0.000567098512025581 0.000666398866932399 0.00110258068211319 7.10945826091685e-06 0 8.44242205661454e-06 0.00139233266634108 0.00116590734493863 0.000743543678638661 1.49811541025046e-05 2.46945746998989e-06 0 0.00151207547911712 0.00142054445020214 0.00109339994022572 2.5208781665066e-05 5.96206793250841e-05 6.02843326102231e-05 XM_005217529.1 IL15 PREDICTED: Bos taurus interleukin 15 (IL15), transcript variant X1, 2e-143 517 77.99 0.0432705248990579 0 noncoding 0 0 0 0 -0.524773738476668 0.158493525583533 -0.00326503765418669 0.947590510200447 ACTCAATATTCAAAAAACTAGGATCATGATATCTGGTCCCATTATTTCATGGCAAATATAAAGCGAAAAAGTGGAAGCAGTGTCAGATTTTATTTTCTTGGGCTCCAAAATAGTGCAGACAGTGACTGCAGTGGTGAAATTAAGATGCTTGCTCCTTGGAAGGAAAGCTACGACAAACCTAGACAGTGCATTAAAAAGCAAAGACACCACTTTGCTGACAAAGTTCTGTTTAGTCAAAGCTATGGTTTTTCTAGTAGTCGTGTATGGATGTTAGTTGGACCATAAAGGCTGAGCAACAAAGAATTGATGGTTTCGAACTGTGGTGCTGGAGAAGACTCTTGAGTCCCTTGGACTGCAAAGGGATCAAACAAGTCGATCCTATAGGAAATCAACCCTGAATATTCATTGGAAGGATTGATGCTGAAGCTCCAATACTTTGGCTACGTGATGAGACGAGCCAACTGACTGAAGAGTCCCTGATGCTGGGTAAGACTGAGGGCAGGAGAAGGGGCAGCAAAGAATGAGACGGCTAGATGGCATCACCGACTCGATGGACGTGAACTTGAGGAAACTCTAGGAGATGGTGGAGTGGAGGACAGAGGAGCCTGAAGTGCTCTAGTTCGTGGGGCTGGCTACAAAGTCAGACATCACTTAGTGACTGAACAGATTCGACACCCCAACTCTTAACATGACCACAGTGGACAAACATTTGATTTGTCCAGAGACGTTGTTGCAAGCATCCTTCCTCTGCAGCTGTTTCTGTTTGTGATGTAGTCTTGCTCTCTGGGAAGCTGGCTCCTCCCTCACTCCTGAGGATCTCAGTTTAAGAAAACATTCTATGGACTTGTGCTGATGGCCTGAAGTTACATGAGCCCCAGTTTGTAGAAGACTGACGGAAGGCATCTTGTTCTTATTTATGTGCAGAGATTTTCCTCCGGACTTCAGTTGTGCTCCTTCTCAGAGTTCTATTCTGCTTGTCTCTGATGTGTCTGCTAAGCACTGAGATCCCAGGAAATAAGGCAGCCTGGAGACCAGGCCTGGCTGCCCTCTCTGGACCATTCAGGGAGCTACAACTGGCCAGGGTCACTATTGGAGAAAGAAGTGTCTGCTGCCAGCCAGGACCTCCATCGTCATGGAAACCCGAGCTCCATCCTCAGCCATCCTAGTTGTCACAGCTTTAAGTTAAAATTCACCCCCATCATTCAGACATCCAATGAGTGACTCACCCACATCCCTTCTGGAAAACGAGACCTTGTTAAGCCCTCCGTGATTCCCACCCTCACATCCCATTCCTTTTATTACATGGTGAGATAGGACCTAGGTGAGAACAAGTCATTCCATCAGTCTTGCAGAGAAACCAGGACTCCCATGAATAAAACATTCTAGTCAACGTTAATAGTTTTTGAAAATAAGTGAGTGAGTGAAGTCACTCAGTCGTGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTACAAGGCTCCTCTGTCTATGGAATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGCTCTTCCCGACCCAGGGATCAAACCCGGGTCTCCTGCATTGCAGGCAGATGCTTTACCATCTGAAGCCAGGAGCAAAAGCTCACAGGCTTCTCCATGGAAAGATTCTATAACTCAAAAGTCTGCGAAGCTAAGAGGAAATGTAATCATTTAAGGCATCATTAATGCATCACCTGCACTTATTCCAAAACAGGTGTGCCCTGGGCTAAGTCGATGCATGCAGGAGCTGAGGGCTTTAGGTAATGAGACATGGCTCATGCAAGCTGCAGTGTCAAAGTCCATAGAGCCAGTAGGACAGTTTTTTCCCACAGTGACAAGGACCTGGGTGACCCTCTGGTTACAATGCTGTAACAGAGGTGCCGAACATCCAGCACAGCAAGGAAAACCTCAGCCATGTCTGATTCACACTCCAGCTTGTGTCCTGGATGTCACAAAGCCCCCTCCCCAACACGCCCACCCTCCAGTGATGGGGTTTGCTATCCCAGAAAAGAGACTAAGGTGAGAGCAGTTCCCTTACCTTCTGGGCACCAGCACCTCCAATCCTCCTACTCAAAGACTCCCTTCCTGACACAAACACCATGATAAGTCTGCATCAAACCTGGTTTCTAATGATTCACCAGAGGCTAAATGTTAAGAAAAATTCTGAACCAGCCCTCTAGACCACCATTTTCCATAACTCCGGTTTCCTCGTTTGAAGGAAGTGGTTGGATCAGCCTCCAGAACATCAGACATCACTCTGGAGAGCAAGCATTCCTTCACTGCGGGCACAAGGTGGTCCCCCTGTGGTGCCCAGCTTGTCGAGTCCATGAAGTCAGAAAGGTCAGGCTCCGTGTGGATGTGCAGTGACCTCTTCCCTCCCACTCGACTTGTCCTCGGGCGTCCTCGAACAATCGAGGAAGATCGGAGGCAGCCAGTGCAGATCACAGAGCAGAGACAAGGTCTGAGGGTTTTACAGAGAAGTTTACATACGTTTAGAAGCCAGTTCATTTTTTTATTTTACATGAGAACCAGGAAGAGTGTGGTCTACACAACCTGACTAGGATGAAAAGTCACTTCAACGCTCCTGAAGTTGACCGGGAAGGATGACAGAACAGGCTTCTAGAAAAGGAAGCAAGCCTGCTAAGATCAGAGACTGCACCATTTCTAGACCTGGTACTTTCTGCCTTCAGGCCTGACCCACACGTGCACATACGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACACACGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCTGACCCACACGTGCACATCCGCCCTCGGCACTGTGCCCTATTCTCAGGGCCAGTGGCCTTTCTCAGCCTTACGATTAGCCCCAGCCATCTCTAGCCACAGGCCGGCTTGTATCTAGCCCCACATGGAACCAGACGAGGTGCCATCCCTCACCACTCAGCCTTGCTCCAGGGGGTTCACTTCAGACCAGGACACTATCATCCGGCCTCTTTTGCGGGGATCGTAAGCCAGTTCAGAGAGGAGTATGAAATGCCAAACAGATACAGTGTCTAACAGGATGCTCCCTTGGTCCCTATCCAAGTTTCTGGGGGTTCAAGGACACAGTACATTTTAGGTCCAGATGTTTCTCCACAGAAATCTGTCTAGTACAGAAGTCTGTTTCAAACAGCCCTCTTTGCATTTATGGACATCACAGCACTGGTGGGATAACGGTCATCTTGGTCCTGGGTAATGGGTCTTTAAGGGAATATTCTCTATGCACAGTTCTAAACCTGCCATGGGTTCTGAGAGGGAGGTGGTGGACGTGGGTCCTGGCTTGCTGCCTTGAGCAAATGGCCATGCGTCTAGAAGCTGATGCCGGTTGGCAGGCCAAGACTACCCGAGTCGGGAAGGGGGAGATCAATATTGGGCCAGGAGTGTACAGAGTGAGGTCCAAGGACAGTCAAGCCGAGGGCATGGACGGGCCTCCTGGAGCAGCGTGCAGCTCTGGAGGGGCCCCTCGCCGCCTTCACGCTCTCACTGAGCGTTGAGCACCGTGTTTCAGTTCACACCAGCCCTTAATTTGAGATCCCATCTCTGCAAAAGATTCTTGCCCCTATACTTCAACACCTTGGATTTCTCAGCTCTCTGGATGGGTCCATACTGGCAGCTTGGGGGGCCCAATGCTGGCTTGGGATCCAGCGTGTGGATTTTATCCTGGAGACAGTCACCACTCACCTCAGGCCGTACCATCCTCTGACTTCAGATGCGACTACCCTTCCTCCCACCGTCCTTGTAAAGGCAGCATCACTCCCTGTCCTCTTTCTGCAACTTGTTTGTAAACTATGGTTGACTTACAGTGTTAGTTTCAGGTGTACAGCTTCAGATTCTTATTCAGTATAGGTTGTAACAAGATACGGAATACAAGGTCCATGTGCTCTACAGTAAATCCTTCTTTATGGCTTCCTGTATTCTTAATGGGTCACTATTAGAAGAGACGTTCGTCTCTCCAGGCCTGGGAAGTCCTGTTACCCCAGATGTGTCACCCCTGGCTTTCTTGCACCTGTGCCAGCCTCTTAGCTGATGCCTGAGCTGCCTAGCGTCTGCCACCCACACCTCTGTAGTGAACAAGGGTAGAGCAGCCAGTCCAAGAAGTCACTTCACTGAAGTCAGTGCCACTTAGTGAGGTATCTGTTCCTACAGGTCCCCCCTTCCCTTTTTCTTGGGCAACCTGGTTTTGCAGAGGGGTTCCTCTCAAACTCATTTCCTCCCAAACCACAGGCTACTGAGGTGCCCGAAGTCCTAAGTGTTTAAAAAAAAAAAGCCTTTGGTGCCTGAATCAAGAAGGCCAGTTTCCCCTGTACTAAAGAGTTTTGCCAACCCACTGCCACATCACAACACTTCTAGTTTAGTATATACAGTTTATGTTTCATTAAGAGAACTCAGCTTTACTCTTGACACTTGTTTTATGACATTCTCTTAAACTTGTGCTTTGAAAAGTCTGTTCATTTGAGATACCACGATCTAGGTCGACCCATGACTCCCTGGATATCTAGCCATGGACAACTCTGAACATCACTGCCCGTCTGGGTTTCAAGGACACAAGGACCAGGATGAGGCTGAAAACTCCTCTGCAGCATCTGGCATCTATGTTGGTTTATCTTTTAAAGAGAAGCAGATTTGGACTTTGACATATGGACCAATGCTCTCAGACCCTCATCACTCAAGGGTTCTCACAAAATAAAAGCAAACTCAGAGAAAATTGGTATTTGCCAGAGGGGAAGAAAATGGGAAAGGCTGGGTGAAAGGCAGGGCCATGACACACTTCCAGATATAATCAAGGGGACATCAAGTCCTCTATTACTAGAGCTGCCATGCTGTATATCTAGAAGTCAGACAGAGCAAACCTTCAGTTCTCATCACAAGGAAAGACACCCTTGTTACTTGAATGGTGATCAGTGTACACAAATCATGATTTTGTATACCTCAAACTTATGTCAATTTGACTCAAAGTTATGAAAACTCAGTGACACTCAAAACAGGCTCATGCTAATAGAAGTAATTTCTAGTTCGGTAAACGCTTCTTTAGTGACAACAAGAATAGGCATGCTTCACTTAAGACCAAAATAAATGTTTGTTGAAGTGGCCCTGGGGTTTTTCCTGGCTCAAGTGACTCGATGGTCTGAAGTTCAGAAATATCTTCGAACCTTCCAAGCCTGGAGTACGAGAGAGACATTCCTACTCTTTCACAAGGTAAACACGAAGTGGGGCTCTGGCTTTGGTCTCTCGTGGGTGAGCCTGGAGAGGGAAGGCCTGGTGTGTCCTGCGTCTCGTGCAGTGCCCTCATGGAGATGGAGTCCTCTGTCCGACTCCTGAACCACATGCAGAGGAGCCACAAGTCCACCGATCCCATCACCATCTGTCTCAGAGGCGAAGAGCTGCCCCAGAGACACCCCAAAGCAACAGTGGCTCGACCACAGTGCCTTTAGGGAGGGCAGTGGGCGTGGCCTGCAGCTCCCCCAGGGCCTGGCGGGCAGCTGAAGACTGTGCAACCTGGAAGACAGGAGCACTGAGCCCCGACAGACAGCCCAGCAGCCTCAGAGCCAGAATTAGAGGAAGGAAGGTGCTCACAGAGGACAAGGAGCAAAACAGGAGAGACGGAAAAGTGATACGTTTACTGAGGGCGAGTTACGAACAGACATAGGGATAGGGGACCTGGGCCGCTGAGCAGCCCTGCCGGCAGGTGGATGCGAGTGATCCCTGGTTTCAGAGACAAGCAAGACCTCAAAAGCAGAGCCTAGTGCCAATTCCTAAGGAAAGAGCAGTTGCATCCACAAGAATGGCCTCAAGCTTGGGCTCAGGAATGCTTACAAAAAGCAGCCAGGGGAAAGCAGACATTGTCACCCCATCACAAACACCAGTATCCTCTCCAAGCCTTCAAGGACCAGTTTCCTGGTATTGCTGTCAGGGAAGAACAGGCTAGACAGGCAGGCACACCTCAGAATCCAGGTGAGAGGTGGGCATCTAGAGGTGGGCCCTGAGTACCTCAGGAGGCCCCGGTCCCAGGCCTCAGCCAACTGTTCCCCTGGACCAAAGCTCCCCGTCCACTGTCCCCAGAGGCCCCCCCTTCTGTCCCACCATCTTCTCAGGAGCATCCAATCATTTGCTCAGCAGAGCTCTTTTCTCCCCCCACACTTTGGTCCTCAAGTTCCTCTGGGGGCTTTGGGGGCCAGTCACAGGAAGGTCCAGCCCATCCAGACTGTAGGAGAGAACTCACCCTCCAAGGACATTTACGAGGTCCCTGACAATAGTGTGACCCAGGGAGGACCCCCCTCCCATCTCTCCTCTGGGGTCCATGACTTGGAAATGGCAAGGAGCACAGTGGCCTGGGCTCACTGCCCACCCCCAAGACTCCCTTCGAGCCTGACTCTGACCATCCTCAGCAGTGGGGGCAGCATTTGAGTCAGCCAGGAACATTCCACACACTAGACAGAGGTGGGATGAGCGGCCCCAGGTTGTCCTTGTAGAGGGGAGGGGGCAGAGGAAGGGGACAATCCTGTAGCTTCGACACACGTGACAAGCACCGTGTGCCAAAGAGCTACAGCCCTGACAGCCCCAGAGTCGGCAGAAACCTAAGTTAAGCCCCTTAGATGGGAGCTCCTCTCCACCACGAAGCCCCAGGAAGGGGCATCACCTCTTCTGCATGACAAAGAGCAAGAAGAGGATTTTACGAGACCCTCTGCAATGAAGAATGTCAGGCTCCTCTGGACACATTGCAGAGCTCAGGAGAAAGGCCTCAGCTTCTCTCCTCCACCCTCATAGGACTTCTTTCCAAGGAGGCAGAGCCAGTCTGACAAAGGAGCTAGGATAGCCATCATGTTGAACCAAGACAAAGGCAAGAGCTGCCATCCCCTGGAAGCCCAGAGAGGGGTTCCTCCGTCCTGTGGGTGGCACCCTCTCTGCTTCCCTGATGGTCGCCAAAGCTCGGACGGCCTCTGCAGCCCGCCACGGGTACCAGGCAGTGGATGTCCTCCTTGGAGTCTGAATGAACCAGAGCATTCTGAGGACACAGGATCCCCTCCCTGCCATCTCCATGATGCCAGATCTGAACATGGCAAGTGTAGATCTGAAAACTCACCCAACACAGGTGTGCCTTTGGGCAGGATCAGAAGTTGAACCCAAAGGTCGGTTGGTGTACAGAAGAGGATGCTCCACATCTGGGCTGTTGGGAGTCCAGGAGCATGCTTGTGTCCTAGCCGTGAGCACTGGACCTGGCGATGGCCTGATCTTCATCTAGCAATGGCTAGCTCAAAGGTCAAGCCCATAGGGTGCTGGAATCTTTAAGTCTTGGAGCATTTAAAACATGCAGAAAATAGCAGACGAAGGTATAATAGCGACTCTATGAAATCCCTCAGTTTGTGAAACTGACTCTTTCCATAGTTGTAGCAGCTTTGTACATATGAGCACGCATGTTTACCCATGATCTTTCCTCGTGTCTTTATGAAGTGTAAGTTGTCTAAGTCTCTTGGTGGTCTTTATCTGTCTCCTCCCTTCTTTAAGTGTGAACTTGGAAAGATACAGCCTGGATTATCAAGATATGTGACTTTCCATTGGTGCAAGTCTTTGTAAATTCAAAATTGTTCTCAGATTCATACATAAAGCTGACTCCGTGAACTGAGTGTTACCCTAATTCTGGGTTGTCTGAGAAATGTAATCAAAACCTTTGCATTTGTTCCTGGATAAATGTCAGGAGTTATTGACCCTCTGTACTTTCTAGAGGTTCTTCTTCCATTTTTCTCTTAAAATTGCCACCTGCCAATTTTGGCAGACACCAGCTCTGTGGCAGGTAGAATACCTTAAAATCTCCCCCCCCCCCCCACAGCATGTGAGATCTTAGCTCCCTGATTGGGGATCAAACCTCTAGACTCTGCAGTGGAAGTGAGGAGTCAACCACGGGCCCACCAGGGAAGTCCCATTCTATCCCATCCTTGGGGTCTTCAATCAGTGTTATCATGGATGGCAAGGACCTTCTGAAAGTTTCATTTTGTAAAGCTTCTTTTATGATTAAGCTACAGGCTAGGCACACACTATTCCCTACTTGACCACTCTCAGTTTGTCTAGATTTCAGAGATTCAAATTTTTAAAAAGACATTCAAGGCAGTTACCATAGATGCCCTAGTGAGTTGTTAGGCTTTTGGTGGTACCAGAGATCCTTGCGTGAACTGCCTGGAGGAAGAGACAGCTGGAGGTCTAGTAATGTAGGATTTAGACATCAAGACAAGTTTCATATCAAAGCCAGATTCCATCTCACACTGCAGGGTCCTTTTGTTTTAAACTATTATCTCGATTTCCAGCTTCTCCTTATGAAAAAGCTAACAGACAGCCTGAAATCTTACATGAATAGAAAAAGGAATGTAAGCGACTACTGAAAACCCTGGCCTTGTGGAAGTCACATCCTTTTCTAATCTTGCTGTGGACACGAAACCCAGCAGGCCTCTGTACTGCCCCTGAGGGCTGTTGGCCCTGCAACTTCATAGCGTTAAGTGTTCAGCTGCACTTGCACCGATGGCAGCCACAAGTTGTCAAGACGTTTCCTCCTAGAGGGTGTGTTTGTATCCGTGTGTGTGTAGATCTGGTCTAGTTTCTAGAGCTCTGCAGTAGTTTAACACCTCACATCCCTTTAACCTGTCACCACCACTGTCCTAGAGATTGTTAGCAGAAAGCCTCTTGAATCCTGGCTAACTCACAGATTAACTTAGTGAATGTAATCAAAGCAGGAGATGCCATCAGCGAGGTGGTATCAAGAGAAAAAAAGACAGAGAAGTAGCATAGGGAATGTGGGACGCAGCAGAGGAGAGGGCTAACCTGCATGCGGCTGTGGTCTCAGCAGGAAGAAGGTAAGACAGATGATATAATAGCAGTTTCCCCAAACTAAGATCTACATTAACTTTTGCCTTCAGTGAGAACTATTTGCATTTTACTTTAAATGACGTCTGCTGTAAGCCCCACATCCTGATCCAGATCCATCACATTCAACCCCCATCAACCAATTCCTAAAAGTATACCGAGTGTCACCAGAAGCCAGGACTTGATATAAAAAGCTTGGCTTCTAAACCACTGTGACATAGCCAGGCAGGTTCTGGGGATCTCCTGGGCTCTCATCTGCCACCAGGCCCAACACAGGGCACAGGAGAACACCCAGTCCTCGTCCACTTCTAGAGAACCTCCTCCTTTGGATAGGACTCCCAGGTGGCCAGGCTCTTGGCATTGAGAACTGGGGCAAATATGAAGAGATAGGAGTCATTCCCTTGGTTTGGAAAGACGCAGGAGATGGTGGTTACGCTTAAACGGAGGGATAAGAAGTCCACAAATATAGGTCCCTCCAAATCACTTCCTGGAATAATCTGAAGACAGATTTGTAAAACTGAAGCTCAGTTGTGAGGCTCAATTCCAGACACACAATGTTCAGGAACGTTCCCTGAGAAACCTTGTGGTACTGCTGGGAGAAGCAACTGAGTGGAGTTTTAGGAAGAATTCTTAGGATTTGGAATTAAGATGGCAGGGTAGATGTTTCCAGAAAAGATTATCCCTCAAGATACATCCTACCAACACCCAGGATGTTGTTCCCTTCTCCACACTTCCTCAGAAGCAAGTAGCCCCTACTTTCCCCACCATATAGCCAATATTTTATAGTAGCTATAAAGTATAACCATCAGGCTATCAGTATATTGTACACCTGTAACAATGTTGTATAGCAACTATAATTTGATAAGAAAATTAAAAACGGTAATGTGAATGAAAGTGACTCCATACCCAACAGCACATGGTTTGTTTTTTTTAAACACACAGGGATTTACACTTGTAACCATCCTGGTACCCCGTTACCAACCTCATCTGTCTGTCCCTCATTCTCTGCCTGCTAACACACCCCTGAGTGTTAACAGAATTGAGGAGCGAGGTTGGACTGCTGACCTCAGTTCCCTGTATCTTTAATACAAATACGAATTTGCCTAACCCTTTGTGATCACAAGATGGGTAGAGACAGTTTTGAGTGGAGACACCACAGATTTTCTGAGTAGACTTAATGCAAGTTGACAAGAGAGCGTATTACAGGGTAGACAGGATCTGCCTGTTAACATAAGGCAAGGTGACTTTCTAGGATGAATGGAAAGGGCTCATCTCATCCTTGGGCTTGGATTCAGAGTTTATTTGGTTCATCTTAAGTATAGGAAAGGAAGACACCTAATATCACTTCTTCCAACTGCCATTTTCAAGGACTAGGGACAGAGGAATATAGTAGATTCAGACACCTGCCAGTTACTCCCACTGGCCACTCAACTAAGACTTGAATTTGGGCTCTCTAGACTTGAATTCGAACATATGACCCAGATATCAAAGTCCCACTAGAAGTGGAGGTCAGAGGGCAACATGAGCTCGCGAGGGGCAGTTGGCACCACGTCAACAGGCACCACAGAGGGGGAGAGTCACCCATGAGGGACCGAGACGACCAATGAAAGCAGAGCTGATAAAAGGTGGTCGATGCCGCCAGTTCACTCCCTGCATTTTGCTTCATTTTTATGGGCAAATAACCTTGAGAACAGATTTTCACATCAGGCAGCTGACGGAAAGTATGGGAGACTGTCGTCAGAGTCTACCTTTAGACTGTAGGTTAGCTACAGGACACCATGTAAAGAGCCCGAAGTCACAGTTCTAAGCCCTCCTGTCACATGGCTGCTTGTGCTGCCTTGGATCTGTAGGTCAGTGTGTGGCTCATGCAGGATTTCTTGCTGAGCATAGAACCGGACATAGATGACCATCCTCAGGGCAAGAAAGACACACCCTAGTGACAGGGAGACCTTGAAGCCATCCCTCACTGATTTTAGGGCTCAGGCTGTTTACCAGGAGCTTCCCTGAAAGGCTACCCTTCAGGGGTATTAATATTTTAGTTACTCCTATTTGCAGCATCATGAAGCCTTCCAGAAAAATCTAGGGATATGTTTGGCAGATGCCAGAGAAGGAAGGAAGTTCCACAAAAGGACACCACAGTGAGTAGAAGAGGTTTCTTAGGTGTAGACCTCCCAGCACGGGAGGAGATACGCCCAGGGAGCCCTGAAGAGTGTACTTGGGTCATTCAGGTCCAAAATGCAGAGGGACCACTTTTATAAAGTCTAGAGTCAGAAAAGCTGGACCAGGACCTCCAGGACTGTATGCCAGCTACCATCTGCCACCAAAAAGGATGTCAGGGGAAGCCCCTATGTGAAGGGCTATAAGTGGTCAAGAAAATTCTATTAGGTTTTGGGAATAAAAATGTCAGCGGCTTACAGCTATTGTGGCCCCATACTGAGTTTTTCACGTTAAAATGGTGGTGAGTCGGCACCCAGAAGGTCCCCAGTGAGAAGCCTACAATGCTGGGGTCACCCCTGGCTCCCCAGGACTCACCCTCAGCCAGTTATCATCCTGGCTCAGTCCCTCCATGCTTCTCCCTCTGGCACGTCCATCATGAAGAAGGGTCCAGAGCGTCTTGGGCCTTGGGGTCATTTTAGGACCCCTGTCCTCCCGCCAACACACGTCCAAGACCAAGCCACGTTCATGCAGATCCTTTCAGACTCTTAGGAAATAAATTTTAAGGTACATGAATTCATGGATTTAACCTGTCTCAGAGGTTGTCCTGAGGGTCCTGTTCTCCTTGAAAACAGACAGCTAGTCTGAAAAGTGGTCAGTTCTTCCTTCGCCAGGCTAGTGTCTGAATAAAGGCGCTGAGCAGTCACGCAAGCTGGGCGCCAGAGGAACAAGGTGTGGACATGGTGGCATTGACCGCCAGGACTGTGGCAGCAAAATGAAATGAGTGAACAGCCTTATGGCACATACCAGCCAAACAGACCTACAGGAGTTAAACAACCCTGGTTACTGTTTAGCTGTTCCTAACACACGCTTGTAGCTAGACTCGTCCTTCGGAAAGCTAATCACTCTGACTCCATGTAGATTACACTCTGCATCTAGCATTCTTCTCCCCTCTTGTGTAGAATTCTGCATTTCAGAAAGAAGGTCATGGGCCAATAATTTCAGGGACACCAGACCTGCTTGCTGAGTTGCCCGAGGCCGGCTGTGGCCATTTGGAAACTTCTCAAAAGAAATGCAAAACCTTCAAGAGGATATAAAACCTCTCCCTATTCCCCAAAGAGGCGGCATGTTCTGGAGGCACTAGCCTGCTGTGCGTTTCCCTTGGACTGGCAAAAATAAAGCTGCTCTTGTCTATTTCCTCCACAAACTCAGTCTCCACCTCTCTCTCTGGCATCGGTAGACAGAGCCAAGATTCTGGCAACAGAACCAGTCCAGCAGGCGAAGAGCTAGTGGAGGCGGCCCCCGCAGGCAGCTCGCCTCTGCGGGGCCCACAGGAAGCATCGCCCGTGTCCATCACTGCACCCCTCTGTCCTTTCCCACCCCTTGGCTTTTTCTCCCGTGATTGTGGAGCCCGCAGGATAATCCTAGGTCACCTCCAGGCTCCGAGAGGTCCATGGCTCCCTATGACAATCACTGTTGTGAGACAGAAAGGGGACAGGAACCAAGGACGTTTCAGGCCAACTGACCCAGGACAGGCCCCCAGACTCTCTGGACTGCAATGACTTAGGATCGTCAGAAGTGCCAAACCCAAGTTCGTTTACCCTGTCCCCAAGCCCGCTGTGACGACGTTACAGTTCGCCAGCTCAGGTCCACCGGGGAGCCTTGCCCCCTCTGCCCAGATGACCCTGGGCCCCTCCCTCCCTCCATCAGCAGGCAGCCTCTCCCAGCTTCCCTGTGGCCTTGGGGACAGCCGCTCACCCTTGGAGGTAAGAGGGGCATCAGGGAGAATCTGTGTCCTCACCTAACATGCAGTTGCCCCAAGGGCAGTTCACACCACACTGTCTTACAGGAGTAGTGAGCATTACTAAAAGCCACTAGAGGAAATGCTGGCCAACTCTAACATGAAAGTGAGCTTCACAGTGGGACTGTCGGACTTCAGGTCCTAGGCTGACTGAAGTGAGTACGGTTGCCGTTCTGTTTAGTGCTTTGTAGAGGGTTTTTGTTGCGAAGAGTTTGAGGGAAGAGCAAACGAGATGCCACCCGCATGCCTGCAGGTGGCCCTCATCACCTGCCCCATACGTAGGACCTGCACTCTTTGGTAAGGAGCGACTCAAGACACCTGTTCTGAGTGAAGGACCACTGATCTCGAAGGATCTTGAAGCTGCCCCAAGAGCCCATTTAGCTCTCACGGCCAGCTGGCTGTCACTCTGATGGCTAAGGCCTCCTCCTCCCTGGGTCTAACACGAGACTCTTCAAAAGGTTAAAGGTGCAGGCCTGAGCCGTTCATTCACCTACACCAGGCAACACTTAGAGAGACAGCTAACAACTGCGTGCCGGGATGGCAAGCGGCATCTTGTTTTATGGAGAAGGAAGAGAGTGAGGCAGTGTCTTCTGGCTTAAGGAGACGGCGATAGCATTTTCCGTCTGGGTCTATAGATTTAGGGACAGCCCAGCCCGGCTTCCAGCTCCCCAGGCGGCTCTAGTGGTGAAGAACCCACTTGCCAATGCAGGTAGACAGACACAGGTTCGATCCCTGGGTCAGAGAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGCATCCCATGGACAGAGGGGCCTGCGGAGTACAGTCCACGGGGTCTCAGAGTCAGACGCAACTGAGCGACTTAGCACAGAGCCCTGTCTGCTTCTCTAAGGACAGAGACACAGCCTGGCCAGAGCATCCTCCCCAGGCCTCCCCGAACGCTTGTCTCACACTGTCTGGGGCAGCCTGCTGTACCCTCTCCACACCCGCCACCCCCCACTTTACTTCCCCGGCCCCCTGCTGCCCTAGAAGGCTCAAAGGGACGGGGTCCTCTCTCCACTTCATTTTCTATAAAGCAACCTAAAGCGTCACCCCCGCCTGCTGGCCTGAGTACAGGCACTTTTCAAGGTCGTTTTGCTGAAGAATAAAGGGTTGGGGAGGAAGGGGGGCTTCAGAAGAAAAGAGGCTTATCCCTGTGAGGAGGCCGGCTCAGGCCCTCCAAAGCGCCAGGCCCCTTAGAGAGGCCGGAGGCAGGCCCCCTCAGCTGCCAGAGTGAGAGGGGCGAGCAGGAGAGACGCAGTGAGACCGCGCTCAGGGAGGACAGTGCCAGAGAGAGAAGAAAAAGTGGGGACTTTGCCCTGAAGAAAAACAAAATCCTTCCAGCCCACCAGCCCACCAGCCCCAACCTCCCCAGAAACCCATTCAAAGCAAACCCAACCCCTGGGGCAGAGCCTGGCTCAGCAACCCAACCCTGA TCONS_00051231 TCONS_00051232 TCONS_00051233 TCONS_00051234 TCONS_00051235 s 5' 105755 TCONS_00051231 TCONS_00051232 TCONS_00051233 TCONS_00051234 TCONS_00051235 s 5' 120614 EMBV3_33016 AACAAGAAAACAGAAATGGACCATCAAATGATTCATGGTGTTGCTATCTAAAGTTGAAAA Variant GeneID:614469|ITGB3BP:NM_001079619:75_cdna 266^332 3 EMBV3_41684 GeneID:614469 3 GENE ITGB3BP NULL integrin beta 3 binding protein (beta3-endonexin) EMBV3_41559 CTGGACATTGGAGGAAAGAAGGAGTATCTCATTGCAGGGAAGGCCGAGGGGAATGGCAAT Gene GeneID:282093|TIMP2:NM_174472:326_cdna Constitutive 0 NULL GeneID:282093 19 GENE TIMP2 MGC127732 TIMP metallopeptidase inhibitor 2 EMBV3_42738 CCAATCCTTGGGAGGCACTGATGCTAGAGATGAGCAGTTTGTAGGAATTGACGGGCAGAG Gene GeneID:507141|LOC507141:XM_002685698:369_cdna Constitutive 0 NULL GeneID:507141 2 GENE LOC507141 NULL CE5 protein-like EMBV3_05436 ACATGCTACAGTGAAAAGTGAAAATATGGACCATGGAAACACCAGCTAGAGGTTTTATGG Gene GeneID:530407|NETO1:XM_002697664:130_cdna Constitutive 0 NULL GeneID:530407 24 GENE NETO1 NULL neuropilin (NRP) and tolloid (TLL)-like 1 EMBV3_18953 GGCGGATGAACTAATCAACGCAGCTAAGGGCTCCTCCAATTCCTACGCCATCAAGAAGAA Gene GeneID:506229|RPS5:NM_001015531:19_cdna Constitutive 1 NULL GeneID:506229 18 GENE RPS5 NULL ribosomal protein S5 EMBV3_21233 GGGGGGAAAGGAAATGACAGGGAGCCTCCACACAGGAATTATTTTTGTTCTGATACAGAG Gene BVV0102_380439 + 1 EMBV3_10273 GK000005.2:5612122-5812483 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00197073 1 XLOC_118738 NonCoding TCONS_00197073 XLOC_118738 NonCoding NonCoding - 5:5691809-5694030 - TSS146641 2221 4 TCONS_00197073_3 66 0.445745159837911 1 0 0 0 0 0 0 0 0 0 0 0.000118562977363082 4.22587583934318e-05 1.60994381703917e-06 0 0 0 0.000107025546613363 0 2.25942273891914e-05 0 0 0 0 0.000582413894882475 5.28377484879589e-05 0 0 0 8.6494124091159e-06 0 0.000119108020497274 XR_239764.1 LOC100848447 PREDICTED: Bos taurus uncharacterized LOC100848447 (LOC100848447), 1e-60 239 84.55 0.0954524988743809 0 noncoding 0 0 0 0 0.111092891356274 0.352776292542111 0.00923978948733804 0.911044236916268 CACATACACACACACACAGCCATATGTAGGAGTGATTTTTGCCTACACGGTGAAATTTATAAGTGGGGTGGGGTAGAACAGGACCATGGATTTTTTTTTCTTTTTATATCCTTACGTATTTTGTTTACAACCTACAACCTATTCTTTTAAGTTCTCTGCATCAATTTCTCTCTCTTTCCTTTTGATTTTTTTTTCCGCAGTCTTTCCTTCTATTAGTCAAACTGTATTCTCAGTTATAATAGACCTATCCACCCACTTAGTTCACTCATTCATCCCTTAATCCACCATTCGTGATATGACAATTCATTCTATTGTAGTCAACTGCCACAGAACTTTGAAAAGAAAGGACATGATTTCTTTATTGATAGATCGGGTAGCTTGCTTCATAGCCCAACTTTCTCTGAGCAAAGTTTAATTGCCAAGAGAGAAACTCCTTAGTGGATAATAAAACCCAAAATGAGTGCTTCTGGGCAGCCCCTCTTCACACCTCTCACCTCGCACCCCGCCACACCTCCCGGGGGCTGGGAACCGGCTATAATATAAAAAAGAGCAACAGGCTTCACTACATTCAGAGGTTGGAGAGTATGAGTCATAAACTGTTCCTCTGCTTTTATTTTTTTAAAAATTCCTTCCTGTCTTGTATTTCGCCTTCTTCTTCTTACTCCTATTGCTTTGCTGTCTATATGTGTTTATTTTCCTTCCTTCCTTTTCCACCGTCTACTGTCTCCACTGATGTCAGGACCAGGGGTCCCTGGGCATCGCTGATCATCAGTAGTAGCCCATAGTGGGACCAGTGCCCTGTGACAGGCCCTGAGCCAATCCTCTCTGTTTAGAGCAGTGAGCTGGGACAATGAAGGAGGCAAATACTGAAAGACAGAGGGGTGCCTGGTGGGAGCTATACTCTATGGAGCATGACTGCAAAGGGATGCAGTGAATTTTTTTTTTTTTTTAGCAGGGATTTATAAGCCAGTTACAAGAATAAATGGGCTTCCCTCGTGGCTCAGAATCAGTCAAGAATCCACCTGCAATGCAGGAGACCTGGGTTCGATCCCTGAGTTGGGAAGATCCCCTGGAGAAGGGAATGGCTACCCACTCCAGTACTTTTGCTTGGAGAATTCCACAGACAGAGGAGCCTGGCAGACTACAGTCCATAGGGTCACAAAGAGTCAGATATGACTAACTGACACTTTCACTTTATAAGAATAAATATCCCCAAATGTTTGGAGCATTGTTAATAAAGGGTTGAGCCTCTCAAGGTGATTGCTTTGAAATGGACAACACTAATTCAGCTCTGTATCAGAACAAAAATAATTCCTGTGTGGAGGCTCCCTGTCATTTCCTTTCCCCCCACGTGCCAAACACAATTCTGACTTGATCATTATGGCTGCCTGCCCTTCCTGCCACGGTTCTGGACCTTTCTGATAAAGAATGAGGAGACAAAGGGAGAGACGAGACGAGAAACAGGGAGCCAGGGAGTTTTCCTGGGAGTTAGCTGAAACGGAATCTTAACCCCCAAGGGTGACAGCATTAGTAGGTGCGGCCTTGGGGAGGTGCTTCCGTCCTAAAGGAAGGCTCAGAAGGGGATTACTGCCCCACCATAACAGACCCACAGAGATCCCTTGCCCCTTCCGGCGTGTGAAGGCCCGGTAAGAAGGCACCAGCTTCAAACCAGGAAGAGGACCTTCAGAAAGTCACTCTATGCAGCAGCTTGATCTTTGACTTCCCAGCTCCAGAGCTGTGAGAAATAAATTTCTGTGGCTAATAAGCTACCAAATCTGTAGTTATTTATTTCTTTTTTTATAGCAGCCAGAACAAACCAAGACAAGAGTCCTCAAAACAACCTCTCTCCCCACCAAGTGTGTTTCAGTGATTCGCTGGGAGGACACTGTCTTATTCAAGGCTGAGAGTCCAGCAAAAGGACGCAAAGCAAAATCAGCAAAGAGAAGAGCCACGTGGGGCAACGCTTAGAGGAAACCAAGCACGAGTTTCTAGGAGTCCTAACTCACACAGGACGCACTTCATTCTCCCACTGCTGGTCATGGCGACACGGGAGAAGTGCTGCTCTCAGGAGGAGCGCAGGAGACTCGGTGCCCGGCACTGTCCCTGGGGGCTGGACACAGGCGCTCTGCAGAGTGTGTACCCAAATTCCAGACTCCAGAAGGGAAAGCAGGTGGTCAGCACAAGCCACATTACTTCCCAAGCAGTTTAGGCCCAGGGAACC TCONS_00193883 . 5' 79116 TCONS_00193883 . 5' 79116 EMBV3_08119 GTGAACTCCCAGGGGCCTTTGAGGCAGCAGATGAGGGAGGGAACATGGATTTTGACAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38965 AAGAGCAACCCAAAGAGGAAGGAGGAAAACCAGATTGGAAGCCAGAGGAATGGCTCTACC Gene BVT0102_059040 + 1 EMBV3_30022 GK000018.2:34910564-34912744 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21844 CAAGAAGTCCACCACGAATTCTGACCAAAGCTATTAAGCAAAAAAATATAAACCTTAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19278 GCTGACTGTAAGTCTGCTGTCGGTCACATTATGTTCAATACCCAGTCCTCGCACACATAT Gene GeneID:539421|DOCK10:XM_002685638:336_cdna Constitutive 0 NULL GeneID:539421 2 GENE DOCK10 NULL dedicator of cytokinesis 10 EMBV3_43608 GTGCTGTAGAGAAAAGGGTACTCTTGGGCCTTGGTGCTGGTATTGTAAATTGGTGCATCA Gene GeneID:525522|ZNF677:NM_001102092:2_cdna Constitutive 2 NULL GeneID:525522 18 GENE ZNF677 MGC152083 zinc finger protein 677 EMBV3_33891 AAGAGGCTATCTGTCTTTCTCCAGTGTCTCCTCAAAACCAAGGAGCTGCCAAAGGTGGCA Gene BVT0102_165204 - 0 NULL GK000025.2:7955195-8554539 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146146 1 XLOC_089031 Coding TCONS_00146146 XLOC_089031 Coding Coding GRIN2A 25:8550160-8742623 = TSS109354 8060 1 TCONS_00146146_5 1226 13 0.958189149026821 0.000432626790413773 0.000330240840220945 0.00019247193792368 0.000807196172291199 0.000548235070887176 0.000197789945577347 0.000390710039078246 0.000133635386123237 0.00056737089510558 0.00010710008171482 9.94054955564108e-06 9.71730413614786e-07 9.18435477547778e-06 0.000407383532812269 3.37688699931191e-05 4.58635380654302e-05 0 0 0.000171393817352007 0.000382895481312901 4.86272615922566e-06 4.54804283723053e-09 1.13821858414823e-06 8.31992558604963e-06 0.000363002540627032 0.000154177635094674 0.000440065124027208 4.69595890584258e-56 1.09315192289816e-05 2.36299883513074e-06 XM_868917.4 LOC524212 PREDICTED: Bos taurus glutamate receptor ionotropic, NMDA 2A-like (LOC524212), mRNA. 0.0 6587 100.00 0.452977667493797 XM_005255267.1 GRIN2A PREDICTED: Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate 2A (GRIN2A), transcript variant X1, mRNA. 0.0 6812 79.40 0.963523573200993 TCONS_00146146_5 sp|P35436|NMDE1_MOUSE NMDE1_MOUSE Glutamate receptor ionotropic, NMDA 2A; 0.0 2264 91.80 0.957585644371941 4 coding 0 0 0 0 -0.15746050863845 0.333000978978406 0.0179676551571959 0.753782125565587 ATGGGTAACTACCTAAACTTCCTGGATCTGAGTTTCTTTGCCTATGAAATGGTCATTGCACGTCTTCTGGTGGTCCTCATGGACATCGCTGGTGGTCTGACGCGCAGAGTTTGGGTCGTTAGGATACTGTGCAGTTGTTCACTGCTGACGGTGCTGGCCCAGCAAAGACAGGACTCCTTAAACGGCCTGAAAAGCTTTGCACTGTCTGCCCCATTCGCATTCTCACCCACACCACAGCCCACAGTCCCTTGGCGCTCTCTGCTCCAGCTGCACTGGTTTGCACTCAGGCCTCAATTCATGGTCAATGTGACGTGGGATGGCAAAGACTTGTCCTTCACTGAGGAAGGCTACCAGGTGCATCCCAGACTGGTGGTCATCGTGCTGAACAAGGACCGTGAGTGGGAAAAGGTGGGCAAGTGGGAAAACCAGACCTTGAGCCTGAGGCACGCCGTGTGGCCCAGGTACAAGTCCTTCTCCGACTGTGAGCCGGACGACAACCATCTGAGCATCGTCACCCTCGAGGAGGCCCCTTTTGTCATCGTGGAAGACATTGACCCGCTGACCGAGACATGTGTGAGGAACACCGTACCGTGCCGGAAGTTTGTCAAGATCAACAATTCGACCAATGAAGGCATGAATGTTAAAAAATGCTGCAAGGGGTTCTGCATCGATATCCTCAAGAAGCTTTCCAGAACGGTGAAGTTCACCTATGACCTTTACCTGGTGACCAACGGGAAGCATGGCAAAAAAGTGAACAACGTGTGGAACGGGATGATTGGGGAGGTGGTCTACCATCGGGCGGTCATGGCCGTCGGCTCACTCACCATCAACGAGGAACGTTCTGAAGTGGTGGATTTCTCTGTGCCCTTCGTGGAGACAGGAATCAGCGTCATGGTTTCCAGAAGTAACGGCACCGTCTCACCTTCTGCTTTTCTAGAACCATTCAGCGCCTCCGTCTGGGTGATGATGTTTGTGATGCTGCTCATTGTCTCAGCCATAGCTGTCTTCGTCTTTGAATACTTCAGTCCTGTTGGATACAACAGAAACCTAGCCAAAGGGAAAGCACCCCATGGGCCTTCTTTTACAATTGGAAAAGCTATTTGGCTCCTCTGGGGCCTGGTGTTCAACAACTCCGTGCCTGTCCAGAATCCTAAAGGGACCACCAGCAAGATCATGGTGTCCGTGTGGGCCTTCTTCGCCGTCATCTTCCTGGCCAGCTACACAGCCAACCTGGCTGCCTTCATGATCCAGGAGGAGTTTGTGGACCAAGTGACTGGCCTCAGTGACAAAAAGTTTCAGAGACCTCACGACTATTCCCCGCCCTTTCGATTTGGCACGGTGCCCAATGGCAGTACGGAGAGAAACATCCGGAACAACTACCCCTACATGCACCAGTACATGACCAAATTTAACCAGAAGGGAGTCGAGGACGCCTTGGTCAGCTTGAAAACAGGGAAACTGGATGCTTTCATCTACGACGCTGCCGTCTTGAATTACAAGGCTGGGAGGGACGAAGGCTGCAAGCTGGTGACCATTGGGAGTGGGTACATCTTTGCTACCACTGGTTACGGGATCGCCCTCCAGAAGGGTTCACCGTGGAAGAGGCAGATTGACCTGGCCCTGCTCCAGTTTGTGGGTGATGGGGAGATGGAGGAGCTGGAGACGCTGTGGCTCACGGGGATCTGCCACAACGAGAAGAACGAGGTGATGAGCAGCCAGCTGGACATCGACAACATGGCAGGCGTGTTCTACATGCTGGCGGCCGCCATGGCGCTCAGCCTCATCACCTTCATCTGGGAGCATCTCTTCTACTGGAAGCTGCGCTTCTGCTTCACGGGCGTCTGCTCCGACCGGCCGGGCCTGCTCTTCTCCATCAGCAGGGGCATCTACAGCTGCATTCACGGAGTGCACATTGAAGAAAAGAAGAAGTCTCCGGACTTCAACCTGACCGGATCCCAGAGCAACATGTTAAAACTCCTTCGATCTGCCAAAAACATCTCCAACTTGTCCAACATGAACTCCTCAAGGATGGATTCCCCCAAGAGAGCTGCGGACTTCATCCAACGAGGCTCCCTCATCGTGGACATGGTTTCAGATAAGGGCAACCTGGTCTACTCAGACAACCGGTCCTTCCAGGGGAAAGACAGCATCTTCGGGGACAACATGAACGAACTCCAGACCTTCGTGGCCAACAGGCACAAGGACAACCTCAACAATTATGTGTTCCAGGGACAGCATCCTCTGACTCTCAATGAGTCCAACCCCAATACAGTGGAGGTGGCTGTCAGCACGGAGTCCAAAGGGAATTCCAGGCCCCGGCAGCTTTGGAAAAAATCAATGGAGTCGATCCGCCAAGACTCCCTGACCCAGAACCCCATCTCCCAGAGGGACGAGGGGCCCGTGGAGAACAGGACCCACTCCCTGAAGAGTCCTCGGTACCTTCCTGAAGAAGTGGCCCACTCAGACATCTCCGAAACGTCAAGCCGGGCCACGTGCCACCGGGAGCCCGACAACAATAAGAACCACAAGGCCAAGGACAACTTCAAGAGGTCCATGGCCTCCAAGTACCCCAAGGACTGCAGCGAGGCCGAGCGCTCCTACCTGAAGACCAAAGCGAGCTCGCCCAGGGACAAGATCTACACCATCGATGGCGAGAAAGAGCCCAGTTTCCACCTCGACCCACCCTCGTTTGCGGAAAGTATGGCCCTCCCCGAGAACGTGGACTTCCCTGACACCTACCAGGAGCGCAGCGAGAGCTTCCGCAAGGGGGATTCCACGCTGCCCCTTAACCGGAATGCCCTGCATGAGGAGGACGTGCTCCCCAACAATGAGCCATACAAACTCTACTCCAAGCACTTCAGCCTGAAAGACAAGAGCTCCCCGCACAGCGAGGGCAGCGATCGGTACCGCCAGAACTCCACGCACTGCCGGAGCTGCCTGTCCAACCTGCCCACCTACGCGGGCCACTTCACAGTGCGGTCCCCCTTCAAGTGCGATGCCTGCCTGCGGATGGGGAACCTCTACGACATCGACGAGGACCAGATGCTTCAGGAGACGGGGAACCCCGCCGCCCAGGAGGAGGTCTACCAGCAGGACTGGGCCCCGAACAGCGCCCTCCAACTCCAGAAGAACAAGCTGAGGATCAGCCGGCAGCACTCCTACGATAACATCCTCGACAAACCCAGGGAGGTGGACCCTAGCAGGCCCTCCCGGAGCATCAGCCTCAAGGACCGCGAACGACTCCTGGAGGGAAACCTGTACGGGAGTCTCTTTAGCGTCCCCTCCAGCAAACTTGCGGGGAACAAGGGTTCCCTTTTCCCCCAGGGCCTGGAGGTCGGCAAGCGGAGCAAGTCCCTCTTGCCGGACCACACCTCCGAGAACCCTTTCCTCCACTCCTATGGGGATGACCAACGCTTAGTGATCGGGAGGTGCCCCTCGGACCCTTACAAACACTCGCTGCCGTCCCAGGCTGCGAATGATGGCTATCTCCGCTCGTCCTTGAGGTCGACGGCGTCATACTGTTCCAGGGACAGTAGAGGCCATAGCGACGTGTATATTTCAGAGCATGTTATGCCTTATGCTGCAAATAAGAATAATATGTACTCTGCCCCCAGGGTTTTAAACTCCTGCAGCAATAGACGTGTGTACAAGAAAATGCCTAGTATCGAATCTGATGTTTAAAACCTTCCATTAATGTTTATATTTATAGGGAAACATACCTAATGGCCAATGTCTGGAGGGGTAAATGATGGATGCCCCAGTAGTGCCCTGACCAGAGGAAGAGGATTTAGGAAGGTATTTTTCAGTTGGTTCTTTTGCACATGGCTCCAAGCCGTAGTCTTCCACTCAAGGAATCTTGTGAGGTGTGTGCTGAGCACGCCAGAGCCCAGATAGGTGAGTCCTTAACCAAAAACCAATCCACACCAGGGCGGGTCTCCTGGACATGCCCACCAGGTATGTCGCAATAATGACGCATCGGATGCCAGTGGTCATGTGACGATTTCCTATATTCCAAATTCCATTAAGACCAGCCCACCCTGTAATTTCCTCATCAGAAATGCCTCACGGTTTCTCTGATACAGAATAAGCAATATGGTATGCGTGTAAACCTGTCACAAAATAAAACAAGAATGCATCCACACTGGAGCGAGATGGAGTGTGCCAGAGATTAGGAAGTTCGGCTTTCTAAGCAGTTCAGCTTTATTGTTCTGCCTCCCTTGATGGCCCCGGCCCAACCCCACCCAGAACTCCAGGCTCCCCCAGAGGATAGCAAACCCGCGTGTCCGTGGTTCACTCTGCTAGCTTCCTCGTAGTCCATTTCCAAGACACATGGAGTAAAAGGCCCAGGAGGACCCTCAGGCAGAGAACGACAAGAGTCTCTTTGGATGTCCATTTGTGTATTTCACAGACACTCTCTCACCCTTGGCTTCGGTGGTCTTGCTCAGAGCTGCACAGACTCACACGTGTGTCTTCAATACCGTAAGTGTGGATCTTCCATCTATGACGCAGCGGCCCTTGTAGTTGATCCCGAAGACTCCTGTGTACGTAAGTTTGCGTTTCCCCCTCCTCTGGTGATGACTCAGGGTTGTATAGTATCTGTTACTCTCCCCCTCCCTCCAGGAACCTTCACTTGTTCAGTCCCCCGAATCGCCGCAGTGACGTTTAAGTGTGTGTTGCTGTTCCCAGCATGGTGAGTGTGGGGGCACGTGCCAGCGGCCACATGTGTGCTGTGATCTCTAAGAAGTAAAATGCCATCTGTCTTGCTAAAGGCCAGTGTGGCTGTAGGGCGATCTTCCTTAACCCGTTCTGAAATTCGGCCCAACACGTGTCCCCGCTCCAACCTCCTTAAATCAACAGCCTTCAAAACAGGAGAGACACTCATGTATCTACCCTGAGCATCCTCCCAATTGTGGATAATCTTTAGTGGGACGAGTGATTCCTCTCTTCTGAAACAGTCGCTCTGTTGAAGGCCAACTGCCTCACCAGCACCAACAGAACTCGCAAAATTCCTCAAGGTATTTGTCATTTCCGAGCCACTTCCATCATTCCCTTCTCACTTGCCTCAAACCTGTGCAAAAATGATAGGAAATGATACTCATTTTTGTCCACTGTGGGGGCAAGGCTGGGGAATCTTGACACACAAGAAGATCTCAGCACACCACCCTGTGCATTCAGTGTGGCCCTGCAAATGACAAGCAAGTTGTTATATTACGACGCTTCACCAAAACAATTTTCTAGTTTAAAAATTAAACACAATTAAACACGATAAAAACCACAAACAACATTCATTACATATTTTATACAGTTCAAATCTAGTAATTAGCGTGTTTTAAATACATGAATGTCCCTGAGATGTCTGGGGTAAGTAGCCACCTGATTTGCATGGTCCCTGGATCTGTGTTGGTGTCCTGTTACAGAAGCCCTAGGCTAACGCAAACTAGCTGGACCATTCCCTGGTTTCCTCCTGCATTTTGCCCTGGGCTCTTGGAGGAGGGGGCAGAATGACAGCTTGAAAAGTTAACCCGTGTCTTAGAATCCCGCCGTGTTCTGTCTTGTAGGCAGTGATTTCCTGTGAGTGGGCAGGTGCCGGGAATAATTCTCTTAGAGCTTGAGGATTCATTGAATGGCTCCATCTTTGAGATAGGACACCTGATCTACCATATTCCTATAATGATGAAAAGTGGTGGCTGAGAAGTTCAGGGTCCATGGGAGAGAGGCAGAGGGAGCCAGTGGAAGTCTTTGAGATGGACAGGCAGAAGGGGCTGATAAGGTACCAAAGATGAATACACTTGAATGTTGCATTTTATTGTTTGGATGTTGCAACTTTGCTTCTCCAGCAAGGGAGAAGCCTAGATTAAAGAACTCGGAATAGCCCCCCAATCTCTACTCTCATGCACACCTATGATCGTATCATCTTTTACCATGTTCTGCCTTTGCCCTTCCACTGCTTTTCAGACCTGTACGCCCCCAGCCAGGATCACTTCCATTTCCTCACAAGTGTCATGTCTTGACACAAAATGAATTGAAGTCTTCCAGAAGATAGCTGTGGTATATCACCAATCTAAAGAGGCTATCTGTCTTTCTCCAGTGTCTCCTCAAAACCAAGGAGCTGCCAAAGGTGGCAGAGATCTCCAGGGAGAGTAAGAATTACACTTGGAATGACCCCATAGATCAAAAAGCCTTCTTCTAATAACAACATCAGTTCTGCTGTTAACCCCATACCTCTCTGGGTATAGAAACTAAATATATGGCTTTGGGAAGAATCGACAGCAATGTAGCCAAAAAAAGAGAAAAAAGTATACCCTTCCTCTAATAGCGAAAGGGTTTTTTAAAAAAGAAATAGCTAGAATTGGATGCTATGTAGTAAACACATCATTTCCTTCCTCCATAGATTCACTGACGCCTAATAGTGATGATCCCAAACATAAGACAACCGACCATTGATTGATGGTCATTTTCCAACTGAAAGATAGTGATGTCAGGCTATTAGAAGGCCAGTCAAGTCTTTCAATTCTTTTGGGAAAGAGTAGCAGGAGTATAACATCCAGAGGTAAATCACACCTTCAGGACAGGAGGTGATAAGAATTACAGGGGATGCCCTGAACTATGGGTCCATTACAGAAGATTCCTCAGACACGTCTCAGCTCTGAGTCCTTAGATTTGTTGATGCCGAGGATCCAGGATCTCTGACCTCAAAGGCGTGCCTGAGTTTCATCTGACTCAAAGTCGAAGCCGGTGTCCGTCGTGATGCTACATTAACTCTTAATGGTTTTCTCCACTTGAGAAGGACCCAGATAGGTTATAGTGCACATGTGCAACCAACTTAAAATGTTCTGTGTAAAAGGAGAGTCTTCTGGGATGCAGGGTCTACTCTGGGCAACCTTTGGGTTTCTGGAAAATTGTTTCCATTATCCTTACATCTGCAGGTTCCTAGGCCATCCCAGGTTTTAGTGCTCTATACGGTGAGATGTCAGTGGGTCTGCTTTTTTGCCAGTGAGGCTTCCATGAGAGGCGTGGGATTACAATCGTCCTACTCATTACGCTTGTGTCCTTTGCAAATCGCATTGCATTCTTTTAGCCGGCACTGTCTCATGGACCGTACCTGGTTTTCTCTTCCCTGTTTCGTTAAGGTGCCTGAGAAGCGTTCGTACTTAGGTTTTCCGACAAAAGCATTAACATTCATCCTTTGCAGCAAACTCAGTCAAATCAATTCACACTTATTTTCAGGGGAGAAAAAATAAAATTACACCTTGTTTACAAATGAAATAGTTTCACTTAAATGGGACTCCAGCCAAGGCAGTTAATTAGTCAAAGACTCACGGCAGCCGTGCGTTCAAACATTGTTTATTCTATTTGATATGTCTACCCCTGATGTGTATTTAATATTCTGCATCTTTCTCAGGAAATGACAAATGCCCCGAATTCTTTGCAAATGGAATTGCTAATCAAAAATAAAAGCAAAAGTTGGTGTTAATTAAATGGTGATTAAAAATTTATCTCCTTTAAACCTAAAAAAGTCCAGCCTTAATAATCAGTTGTCATATAATCAATGCCTTGCACTGAAATCCGTTGCGGGGTTTAAGACCTAAATAAATACTAAGTTGAGAAACCTAAATATCTTTCAGAAGAGCTGAATGTATTCGTTAACTTTATGCAAACCCTATACTGTTTCTTCGTGTAGAGCTGTTGTTTATGAATTCTTCAAAGGGGAACATGAATTGCTTCTGAAATGGTGCCTGTTTGCATGAAGCACAGCTAGAACAGACATAATTGGATTTCAAGGGGAAAACCAACAACAAAAAAACTCCCCGAACTTAATAGGTGAAAGCTAAACTCAGTGGTTGGTATTTAATATGAGTTCAAGGCAATTTGCATTCCAAAAGCAGTGTTTATTTTCCCTTGAGACAAAATAAGACCTTTCCAGATGCCCCATCTTCTCTTGGTAAACCGTGTTGGAAGTGTTTAATGAAAGGTTACCTGGAATTTTGACTTGACAAGTTCCCCCAGTATGCAGTTGCCCTTTTGCATTCAACCCCTTTACATTGTTGTATGCTCCTATC EMBV3_09132 CTGAAATATGCATTTTGTTTATTCTTAAAATGTGTGATTAGAATGTACATATAACATCCC Gene GeneID:781575|TOMM20:NM_001099183:123_cdna Constitutive 1 NULL GeneID:781575 28 GENE TOMM20 MGC166409 translocase of outer mitochondrial membrane 20 homolog (yeast) EMBV3_10242 CGGCCTAAGTGGAACCTCTGGCATTTAGAGGACAAAAGGATGTCAGCAAATCGCCCTGGT Gene GeneID:514616|DOK2:NM_001102002:82_cdna Constitutive 0 NULL GeneID:514616 8 GENE DOK2 MGC179370 docking protein 2, 56kDa EMBV3_11589 CTTCGGGGACATGTGGCCAGACGACAGTTACTGGTTCCCACTACTGCTTCAGAGGAAGAA Gene GeneID:525496|NUDT1:XM_002698230:837_cdna Constitutive 0 NULL GeneID:525496 25 GENE NUDT1 NULL nudix (nucleoside diphosphate linked moiety X)-type motif 1 EMBV3_23102 ACATGGACCCAAATGTGTGACATAAGAGATTTTGGAAAACATTTATAAAGAGCTGTCCAC Variant GeneID:511381|UNG:NM_001075513:132_cdna 534^631 2 EMBV3_00887 GeneID:511381 17 GENE UNG MGC140717 uracil-DNA glycosylase EMBV3_33576 TACAACAAAGACTCAAACTTTATAACAAAGGCTCTTACAGCACTACTTTCAGATGATAGC Variant GeneID:541077|ETF1:NM_001076254:25_cdna 359^498 1 EMBV3_24690 GeneID:541077 7 GENE ETF1 RRF1 eukaryotic translation termination factor 1 EMBV3_37365 TCGTGTGGTTTGACATGGACCTCTCCACCAAGCCATACAGAGTGCTAAGGCATCACAAGA Gene GeneID:515056|BOP1:XM_002692583:301_cdna Constitutive 0 NULL GeneID:515056 14 GENE BOP1 NULL block of proliferation 1 EMBV3_36885 TTTTCTCCGATTAACTGGGGGTGCAGCAGAGTCCTCAGGTGACAGGTGATGTGGAAAGTG Gene GeneID:514580|TRIM11:NM_001077920:4_cdna Constitutive 0 NULL GeneID:514580 7 GENE TRIM11 MGC142513 tripartite motif-containing 11 EMBV3_15042 CTGTTGCCTCTGTTCTCTGGAACCTCCTTAAGCCAAGGATCAGACCCAAGCCTGAGCTCT Gene GeneID:527734|LOC527734:XM_002690628:32_cdna Constitutive 0 NULL GeneID:527734 10 GENE LOC527734 NULL similar to T-cell receptor alpha chain V region HPB-MLT EMBV3_20172 GTGGATGATGTAAAACAAAAGTCAACTGTTGAAAACATGTAGTGAAACTGTCGCTGTGTC Gene GeneID:522795|KLF10:XM_002692759:103_cdna Constitutive 1 NULL GeneID:522795 14 GENE KLF10 TIEG1 Kruppel-like factor 10 EMBV3_36905 TTTCTGTTTTGCTGTGAACAGGGGCGTGGCCTTGGAGGAATAGAGTATCCTTTTGTACAC Gene BVT0101_005731 + 0 NULL GK000004.2:5377297-5424473 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20940 CTTGCTGGAGATGGACGACTTGGACTCGGACTTGCGCAGTTTCATGCTTCCCAGGAGGGA Gene GeneID:100297158|LOC100297158:XM_002692730:190_cdna Constitutive 0 NULL GeneID:100297158 14 GENE LOC100297158 NULL hypothetical protein LOC100297158 EMBV3_30300 CGCAGCCGCCTGTGGCGCTGAAGAAAGAAGGAATAAGACGTGTTGGAAGAAGACCTGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13661 TCCCACAACTGATTCTCACACTGTGGCGAGGAGGTGGGCAGTCGATTGAGAAACTGCTTT Gene GeneID:784219|NUP214:XM_002691646:362_cdna UTR3_Alt 2 NULL GeneID:784219 11 GENE NUP214 NULL nucleoporin 214kDa EMBV3_29604 TAAGAGTCGGGCAGTAATTAACCTCTGGGGGATTGGGACTGTTCACGCGGCATAATTCCC Gene BVV0102_095027 - 0 NULL GK000026.2:44622974-44693167 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39534 GCAGAGGAGGCTATGCAAACTACAAATGAACCTCTCTAACACCTTCCAAAATCTGAACTG Gene GeneID:100337186|LOC100337186:XM_002696011:427_cdna Constitutive 0 NULL GeneID:100337186 19 GENE LOC100337186 NULL Keratin, type I cytoskeletal 20-like EMBV3_38250 CAGAAGAACCCCCCAAAGAACCTCCCAGTGACCAAGGCTGGAACAATCTGAGCAACAAAA Gene GeneID:616539|CHURC1:NM_001046581:217_cdna Constitutive 1 NULL GeneID:616539 10 GENE CHURC1 MGC128554 churchill domain containing 1 EMBV3_08786 TGCCCGCACTGTAACAAGGCCATTCCACAGTTTACTGCCGCTGCAGATGCCTTCAAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05820 GAGGAGTGGGGGAAAGGGAACCATATAGACAGTTGTAGTTCTGTGAACACTAATTGTGTG Gene BVV0102_060678 + 1 EMBV3_17937 GK000003.2:42893790-42934886 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169681 TCONS_00173137 TCONS_00173140 TCONS_00173136 TCONS_00173139 TCONS_00173141 TCONS_00173138 TCONS_00173135 2 XLOC_103419 XLOC_104305 Coding TCONS_00169681 XLOC_103419 NonCoding NonCoding - 3:42917402-42917837 - TSS126974 435 1 TCONS_00169681_1 36 1 0 0 0 0 0 0 0 0 0 0 2.82629673736537e-88 1.20720387602959e-13 0.000105998143884242 3.82133702352587e-05 0 0 0.000299035694190703 0.0133325416800877 0.00444690331750412 0 0 0 0.00183440863102692 0.000266506300056057 0.001608465025146 0 0 0 0.000188211090285985 0.00028161645146646 0.000131469759056573 XM_003585862.2 CDC14A PREDICTED: Bos taurus cell division cycle 14A (CDC14A), transcript 0.0 785 100.00 0.997701149425287 NM_003672.3 CDC14A Homo sapiens cell division cycle 14A (CDC14A), transcript variant 9e-143 509 86.39 0.997701149425287 0 noncoding 1 1 1 1 -0.0574665626632528 0.640528677352288 -0.0389644358481386 0.658454507690484 AGCAGTGTATTCTTCTACACCTTAAAATAGAACAAAATGTCTTTTCAAAGGTAAACTATTCATAACAAAATACATGTCAATCTTTATTATTGGAGTAGAATCACTTTGCTATATACTTTCTATATTATACACATATTCTTCTTGATTTGTCTATGTATGTACATGTGTATAAATAATTTTAAGACATACCCATGTAGATACATATGACTAATATACACATATAATTATGGAAAATTTACAGTAGTCAATTTTACAATCATTTAGTAGCTGCACACAATTAGTGTTCACAGAACTACAACTGTCTATATGGTTCCCTTTCCCCCACTCCTCAAATATCATCTGAATTACTTTTCACCGATAATTTTGAAAAAATACTATCATTTTCCTATACAATTAACTGATCATTTTTTACAATAACTCATTATAAAATATTTT TCONS_00173141 r 5' 0 TCONS_00173141 r 5' 0 EMBV3_42437 CTACAGCATCACCAATAACTTTCCCTTCAGGTGTTGCTTTCCTAGTGTGCTACGCCTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12870 GCTTGTTTCTGTCAAGCATATTGGGAAGTGATTTTATTTTTGCAAAATGTTTTCCTTACC Gene GeneID:509717|CCNC:NM_001034358:2_cdna Constitutive 2 NULL GeneID:509717 9 GENE CCNC MGC126915 cyclin C EMBV3_41560 ATATGGTCTTCTCAGTCGCGTTCTCGTTTTCCCAGTGGCAGTCTGGAGGGTGAGGTTTCT Gene GeneID:540530|FSD2:XM_002696589:32_cdna Constitutive 0 NULL GeneID:540530 21 GENE FSD2 NULL fibronectin type III and SPRY domain containing 2 EMBV3_31744 ACTGGGATGCAAGTAAAAAAGCAGAATACCCCCAGAGGCATCCAGGTCCAGGCGTTACTA Gene GeneID:613787|PDGFC:XM_002694441:13_cdna UTR3_Alt 2 NULL GeneID:613787 17 GENE PDGFC NULL platelet derived growth factor C EMBV3_39493 GTCTCTGGTTCTTTGTCCCCCTCCAACCTCAGCTCCCATTTCTGATGGCTGAGATGAACA Gene GeneID:617138|MGC151839:NM_001081619:116_cdna Constitutive 1 NULL GeneID:617138 16 GENE MGC151839 NULL similar to calpain EMBV3_20381 TCTGAGTAAGTCGGAGTATATGGTGATCGAAGAGGGGGGTATGAACCATAGCGCTTTCCC Gene GeneID:525507|LOC525507:XM_002686146:261_cdna Constitutive 0 NULL GeneID:525507 3 GENE LOC525507 NULL similar to potassium voltage-gated channel, shaker-related subfamily, member 3 EMBV3_31835 GAGCTGCCTGGGGAGTCTCTGAAACCGAAAGCGACCTCACCTATGGAGAAGTGGAGCAAA Gene GeneID:534542|KCNH7:XM_002685337:185_cdna Constitutive 0 NULL GeneID:534542 2 GENE KCNH7 NULL potassium voltage-gated channel, subfamily H (eag-related), member 7 EMBV3_29284 TGGGGCAGCAGTGGGGCACGTGGTGACGGGCCCACAGTGGCTTGAGCTCTGGAGGGATGA Gene BVV0102_294477 + 0 NULL GK000006.2:108930693-108988690 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07659 CTTTTCCGGAGAGCAGGGTAGAGAAAAAGCAGGAGCGGCAGCTTGTGTGGCAGGAAATTT Gene BVV0101_018518 + 0 NULL GK000011.2:101006484-101011168 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026312 TCONS_00026311 TCONS_00026313 1 XLOC_014964 Coding TCONS_00026312 XLOC_014964 Coding Coding ABL1 11:101010573-101152856 j TSS18879 5840 1 TCONS_00026312_5 748 12 0.959039091381904 0.00190087274348418 0.00136813399548578 0.00455431035398023 0.00447170114035454 0.00583386813905113 0.000947246377900789 0.0020029490131247 0.0015379811436966 0.00144002522298009 0.0025611693454318 3.46156289803509e-05 0.000142849544497227 0.000106131375985403 0.00231142154667466 0.000306588894218404 1.07550704503099e-06 0.000197992508275836 0.00029823937432746 0.00291337828258469 0.00236499926319927 0.00160522142326208 0.00141991513563117 0.000366378115969675 0.0010910111522062 0.00348977774979223 0.00253848292656953 0.00268595869511061 0.000239514850065375 0.000396389874962094 0.000478795303769679 NM_001206860.1 ABL1 Bos taurus c-abl oncogene 1, non-receptor tyrosine kinase (ABL1), 0.0 5162 100.00 0.489897260273973 XM_005272177.1 ABL1 PREDICTED: Homo sapiens c-abl oncogene 1, non-receptor tyrosine kinase (ABL1), transcript variant X1, mRNA. 0.0 3721 87.84 0.509931506849315 TCONS_00026312_5 sp|P00520|ABL1_MOUSE ABL1_MOUSE Tyrosine-protein kinase ABL1; 0.0 1343 92.37 0.927807486631016 7 coding 1 1 1 0 -0.00431990703325616 0.972621841843649 -0.00568396659461851 0.923306859429795 CCCCCACGTTGCTCCCGTGAGCCTGTAATGCCCTGACTTCTTCCAATGTCACCTACGGCCCCCTCAGCCTCAGCCCAGCCAGAAACTTTAATGCAGAGGAAAAGCCTGGACTGGTTTCACAGGCCTTTTAAAAAGCGGACTTAAAAAGTTGCTGGCCATGCATTCCTTCTCGTCAGAGGGCCAGCTCTCGCTGAAGTCGGGGTGACCCGTGTCCTTTTCCGGAGAGCAGGGTAGAGAAAAAGCAGGAGCGGCAGCTTGTGTGGCAGGAAATTTGTTGGAAGATGGAGACACCAAGATAGGGGGTGGCTGACTTCCCCAGGAAAAGTTCTGGAGGAGCATTCAAAGACCGATCCACGTTTCCTCGATGTGTGGAAATCGACACGACTTTAGCCTCACTGACCGTTGTACAGCATCCTCTGTGAATATTTCTCTTTAGGTTTTTCTCCTTGAAAGGGAGGAAACGTAGCCAGTAAAAGACACGTGAAATCCAGGAACTTTGAGGTCGCACTGCAGTTACATTACTTCGAATTGATAAACTGCGAATATAATCGGAACTCCTGTTTGCACACGTCAACCTAAAATCCTAAGATCTTCGCTTCCTTTTATTGTGGAAGATGTCTTGTGATTGACCTCAGTTACTGACTGGTGGAGATGCGGGGAATGTGAAATCCCACGTAAAGACCGTTTCCTTCTCAGCTCACTGATCATTCTGAAAGATCTTGAACCCTCTTCTGGAAAGGGGTGCCTATCCTTGCTTTATGGGGCAGCAGCCTGGAAAAGTTCTTGGGGACCAAAGGAGGCCAAGTCTGCCTGCCCTGCACTTTATCAAAGGAGCAGGCAAGAAGGAGCCATCAAGGCACGGGGGTCCACACTGCAATGTTTTTGTGGAACACGAAGCCCTTCAGAGGCCAGTAGCATCTGACTTCGAGCCCCAAGGTCTGAGCGAAGCAGCTCGTTGGAACTCTAAGGAAAACCTTCTTGCTGGTCCCAGTGAAAATGACCCCAACCTTTTTGTTGCACTGTATGACTTTGTGGCCAGTGGGGATAACACTTTAAGCATAACTAAAGGTGAAAAGCTCCGGGTCTTAGGCTACAATCACAATGGGGAGTGGTGTGAAGCCCAAACCAAAAATGGCCAAGGCTGGGTCCCAAGCAACTACATCACACCGGTCAACAGCCTGGAGAAGCACTCCTGGTACCACGGGCCTGTGTCCCGCAACGCCGCCGAGTACCTTCTGAGCAGCGGGATCAACGGCAGCTTCTTGGTTCGGGAGAGCGAGAGTAGTCCTGGGCAGAGGTCCATCTCACTGAGATACGAAGGAAGGGTGTACCACTACCGCATCAACACTGCTTCTGATGGCAAGCTCTACGTCTCCTCCGAGAGCCGCTTCAACACGTTGGCCGAGCTGGTCCATCACCACTCCACTGTGGCCGACGGGCTCATCACCACTCTCCACTACCCGGCCCCCAAGCGCAACAAGCCCACCGTCTACGGCGTGTCCCCCAACTACGACAAGTGGGAGATGGAGCGCACGGACATCACCATGAAGCACAAGCTGGGGGGCGGCCAGTACGGGGAGGTGTACGAAGGCGTGTGGAAGAAATACAGCCTGACGGTGGCCGTGAAGACCCTGAAGGAGGATACCATGGAGGTGGAGGAGTTCTTGAAAGAGGCTGCAGTAATGAAAGAGATCAAGCACCCCAACTTAGTACAGTTACTCGGGGTCTGCACCCGGGAGCCCCCATTCTACATAATCACTGAGTTCATGACCTATGGGAACCTGCTGGACTACCTGAGGGACTGTAACCGGCAGGAGGTGAACGCCGTGGTGCTGCTGTATATGGCCACGCAGATCTCGTCCGCCATGGAGTACCTGGAGAAGAAAAACTTCATCCACAGAGATCTTGCTGCCCGAAACTGCCTGGTAGGGGAAAACCACTTGGTGAAGGTGGCTGATTTTGGCCTGAGCAGGCTGATGACAGGGGACACCTACACAGCCCACGCCGGGGCCAAGTTCCCCATCAAGTGGACGGCGCCCGAGAGCCTGGCCTACAACAAGTTCTCCATCAAGTCGGACATCTGGGCATTTGGAGTGTTGCTTTGGGAAATTGCTACCTATGGCATGTCACCTTACCCAGGAATTGACCTGTCCCAGGTGTATGAGCTGTTGGAGAAAGACTACCGCATGGAGCGCCCAGAAGGCTGCCCAGAGAAGGTCTACGAACTCATGCGAGCATGTTGGCAGTGGAATCCCTCTGACCGGCCCTCCTTCGCTGAGATCCACCAAGCCTTTGAAACGATGTTCCAGGAATCCAGCATATCAGACGAAGTGGAAAAGGAGTTGGGGAAGAAAGGCATGCGAGGGGTTGCAGGTACCCTGCTGCAGGCCCCAGAACTGCCCACCAAGACGAGAACCTCCAGGAGAGCTGCTGAGCACAAAGACAGCCCCGACATGCCCGAGACACCCCACTCCAAGGGCCCAGGAGAGACTGATCCTGTGGACCACGAACCCGCTGTATCTCCACTGCTCCCTCGAAAAGAACGGGGTCCTCCGGATGGCAGCCTCAATGAGGATGAGCGCCTGCTTCCCAAAGACAAGAAGACCAACCTGTTCAGCGCCTTGATCAAGAAGAAGAAGAAAACCGCCCCAACCCCTCCCAAACGCAGCAGCTCCTTCCGGGAGATGGATGGCCCGCCTGAGCGGAAAGCGGCCAGCGAGGAGGAAGGTCGTGAAATCAGCAACGGGGCGCTGGCACCGGCACCCCCGGATGCAGTGGAGTCGGCCAAGTCCCCAAAGCCCAGCGGCGGGGCCGGGGTCCCCAACGGAGCCTTCCGGGAGTCTGGGGGCGCGGGCTTCCGGTCGCCCCACCTGTGGAAAAAGTCCAGCACTCTGACCAGCAGCCGGCTGGCTGCCGGTGAAGAGGAGAGCGGCAGCGGCGCCAGCAAGCGCTTCCTGAGGTCCTGCTCGGCCTCCTGCGCCCAGTGCCGCGGGGATGCCCGCTGAGCCGGCACCCCCCACCAGCCGGGCCGGGCTAGGAGCCTCCGGAGGACCCAGCAAGGCTGCCGCCACTGCTGCAGAGGAGCCCCGGGGGAGGAGGCACAAGCCCACCTCTGAGTCCCCAGGGAGAGACAGGGGGAAGCTGTCCAAGCTCAAACCCGCCCCGCCACCCCCGCCACCCACCTCCGCTGGCAAAGCCGGGAAGTCCTCGCAGAGCCCGAGCCAGGAAGCGGCCGGGGAGGCAGGCGCCGGGGCAAAGGTGAAACCTGCAGCTCTGGCTGCGGATGCCGTAAACAGCGACACCGCCAAGTCTGGCCAGCTGGGAGAGGGCGCCAAGAAGCCCGTGCTCCCATCCATGCCAAAGCCGCCGGCATCCACCAAGCCGGCGGGGACCCCGACCAGCCCCGCCCCCACCCCCGCCACCTTGCCGTCAGCACCCTCTGCCCTGGCAGGGGACCAGCCGTCCTCCACCGCCTTCATTCCACTCATATCGACCCGCGTGTCTCTTCGGAAAACCCGGCAGCCTCCTGAACGGATCGCCAGTGGCGCCATCACCAAGGGCATGGTGCTGGATGGCACGGAGGCCCTGTGCCTGGCCATCTCCAAGAACTCAGAGCAGATGGCCAGCCACAGCGCCGTGCTCGAAGCCGGCAAAAACCTCTACACATTCTGCGTGAGCTACGTGGACTCCATCCAGCAAATGAGGAACAAATTCGCCTTCCGCGAGGCCATCAACAAACTGGAGAACAACCTCCGGGAGCTGCAGATCTGCCCAGCAACAGCAGGTGGTGGCCCAGCGGCCACTCAGGACTTCAGCAAACTCCTCAGCTCCGTGAAGGAGATCAGCGACATCGTGCAGAGGTAGCAGGAGCCGGCGGCGCATGAGGGCTCCCTGTGTGTGCCTGGGGCAGCGGGCAGGCGGCCAGCAGGACCCGCACGTGGGGACCTTGGCCTGTAGCTCTGCACTGGGCAGAGCGGCTGCCGCCGTGGAACGCGGCGCCACGACTTTGTCCTACCCGCCGTCCTCCTGCGCTCGCCTCCCCCCTCCTCCTGGCCCCCGGAGCCTCATCCAAGTTCTGTCTGTGGAGTTCCCACTCTGTGGACCGCCATGGGCATCCCAGCCTCCTCCCTGCACATGGGGCTTCAAAACTGAGCCCTCGGGGCCAGGCGGGAAGGTCGATGAGCATTTCCTTTCCATCTTCCTCCCTGGAGGACCTCCACTGGCTCTGCCTTCGCCCCCTTTGTCCCAAGGAAGGAGCACTCTGAACGGGAGCTAAGTCAGCAGAGCTTGGGGACTGTCCCCTCCACTCACCCCAGGCAGCGAGTGTACACTCCCCTCGCTCGGGCCGCCTGCTGAGGACCTGTGTCCAGAGCCACGCCCCGGGAAGCGGGGCCCAGGGGTCACCCCACCCCCCCCTCCTTGCACCATCCCCCCATGTGAAGGACAGCTCTTGACTAGGGGCTGAGACAGGCCAGGGCGCCGCCATCAGCCAGCTTCTGGGTCCCGGTCTGGGGGGGAAGCCAAGGAGTCCGCGATGGGGAGAGTTTCCTTGTCGTCCTCTCCAGGTCCTCAGGGCCCTGTCACCTGCTCTCCTGTGACGTGCACTGCTAATCCTGGATAGAAAGCTTGAGTCTGGAGGGTAGCAGGGTCACGGGGGAGCACACGGGGGCTCCAGAGGCAGGAGGAGGTGGTGAGCTTGGGGGCGCAGCCAGGCCCAGGATGGCCCAGAGCAGGGCCTGGCAGGTCGGCAGTGAGCACAGTTACCTTCCTTCCGAATTCCCGGGGTCCCTGATAAGGTGCTTGGTCTTTACTTCCACTTGCTCTCTTTCCATTCCATTGTGCTCCTCTAAGGCAAAGTAGATTCTTGCAGAGCTCTTTCCCTGGTGACGAGCCAGTCTTCAGCTTTCCAGAGTTCTTGAAGCATTTCCAAACTGCCCTCAGCACAGCTGCCTCTCCAGAGAGAAGGACCTGCCATCGGGCGCCCAGCGAGCATGCAGGAGGGAAAGGACTGGGGCACCAAAGCCCCGCCCAGCGTGGGTCATGCCCCGATGGGCACATAGCTTATTTAATTACCATGAGCACGCTTAACCTAATGTTCCAGTGGGAGTCATCAGGGATGAAGAGAATCAGACAAAGGAAACCCCAGGAAGTGTCTGAGAGAGCAGTCCTCAGCATCATCTCCTCGGGCTGCCCAGGACTAGGCTCGGGGGTAGGAGCCCGTGTGCCCTTGACCTGGAGCAGCTACTGAAGAGTGGGCTGGCACCTGCCTGGGCCTTGCTCAGGAGAACCGGTGGAGAAACCAGGAGGAGACCGCCTCCCACCCGCTCCCCAGGCCACCCTGTGCCCATGACCTCACTCTGGCCCCGTTTGTACACTAATCACCTGAGTTTGTCTTTTATTTCTCTGATAGAGATGGTTTCCTCTGGGTCGTTTTATGCTGTTTTCACAGCGCCTCACCTCTTTGCTCCCCCCGGGCTGCTGTGCTGTGCAGGCCGAGGGGGGAGGGTGCCCCAACACCGCCAGTGGCCTTGCAGACGAAGCGGAACGAAACCCACCAGGTCCCCTCAACTGCCCGTTTCTGAGGTACTTGTCTCTTCCCGTTCACACGATGTGCCACTATATTTTGCATTTATACTTTGATATTACACTCTTTTATAGACTCGCCCTTTTATAAATGACTGTAAATAGTTTCCCACTGTCCTCCCTTCTGGAATGCCTATGGTGTCTTTTTTTTTTTTTTTTTGGTCCAGTACATTTTGTTTCTGTATATGACTCTCTGTTTTTTTGAATCCACGTCTCCCCTCCGTAGTATTTTTTAAATAAATGTTTACAACACCAGA EMBV3_18468 TGACTGGTGTAAAGACGTGGCTGGTTCCTGTAGCCCTCTGCACCGCTGTCATCTTTCTTT Gene GeneID:100297600|LOC100297600:XM_002687725:30_cdna Constitutive 0 NULL GeneID:100297600 5 GENE LOC100297600 NULL hypothetical protein LOC100297600 EMBV3_07714 TCAGTTGACAAGTATTTCAAGCTTCCTCATGCTTCCAGTAAGCCACCTCGGATTTCAGGA Gene GeneID:616114|TMEM48:XM_002686396:248_cdna Constitutive 0 NULL GeneID:616114 3 GENE TMEM48 NULL transmembrane protein 48 EMBV3_17405 CTCCCATTTCTTCTGTGAACTACCATCACTCTTCCCCTTGTCCTGTACTGATCCCACTGC Gene GeneID:100300010|LOC100300010:XM_002687343:18_cdna Constitutive 0 NULL GeneID:100300010 5 GENE LOC100300010 NULL similar to olfactory receptor Olr1654 EMBV3_05564 CACAAAGGTCAAGAGCACCATGTGGATGTTGCAGAGGAGGACACTTACGAGGCACAGCAA Gene GeneID:524761|CD300E:XM_002696212:269_cdna Constitutive 0 NULL GeneID:524761 19 GENE CD300E NULL CD300e molecule EMBV3_15788 TTAAGTAGTTGGGACATCTTGGACCTGGAGATAACAGCCCTTAACCCGTCCTTACCAGGG Gene GeneID:507930|LOC507930:XR_083592:94_cdna Constitutive 0 NULL GeneID:507930 2 PSEUDO LOC507930 NULL similar to Ras-related GTP binding C EMBV3_09278 CTGCTGTTGTTAGAAAAAGAAGTGTTAGACAAGAACGACATGGTGGAACTTCTGGGCCCC Gene GeneID:515757|AFG3L2:NM_001046211:104_cdna Constitutive 0 NULL GeneID:515757 24 GENE AFG3L2 MGC127067 AFG3 ATPase family gene 3-like 2 (yeast) EMBV3_34072 GGAAACTCGATTCCTTTCATTCCTTACTCCAGAGGGAGCCGGTTGCTGGGAGGAAACTTC Gene BVV0102_008850 + 0 NULL GK000004.2:75568195-76606177 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182082 TCONS_00182076 TCONS_00182080 TCONS_00182075 TCONS_00182077 TCONS_00182083 TCONS_00182081 1 XLOC_110762 Coding TCONS_00182082 XLOC_110762 Coding Coding TNS3 4:75531768-75570487 j TSS136150 4547 1 TCONS_00182082_1 537 12 0.882871016064879 4.0581068503294e-09 2.31990034607637e-16 2.59828667736001e-19 0 1.18560153243885e-22 4.13023008502063e-18 1.28170701541774e-06 2.94695685098167e-18 1.14000667303393e-15 1.57822545064401e-10 8.03606547813675e-17 1.60665993660221e-10 0 0 4.48370595611211e-50 1.05481444383207e-38 2.05032963175025e-39 0.00367011881390666 3.53233705925113e-10 7.90778941863155e-05 7.23003902355328e-06 3.87545639567762e-36 6.89711737369705e-05 3.25191687895465e-05 8.60539960331356e-14 3.64122102457872e-10 1.78608264078365e-24 2.42566868810239e-05 1.87966285596583e-17 2.78481162841948e-10 XM_005205606.1 TNS3 PREDICTED: Bos taurus tensin 3 (TNS3), transcript variant X2, mRNA. 0.0 7779 100.00 0.948317572025511 XM_005249823.1 TNS3 PREDICTED: Homo sapiens tensin 3 (TNS3), transcript variant X1, 0.0 1746 82.46 0.366835276006158 TCONS_00182082_1 sp|Q68CZ2|TENS3_HUMAN TENS3_HUMAN Tensin-3; 0.0 870 82.33 0.998137802607076 2 coding 0 0 0 0 -0.0666006295280438 0.707868780237993 -0.0355262192010861 0.592261907477985 GTGTGTGCAGGCGCCTCGTCCCATTGTGATGTGCCGAAGGCGGTGCCAGTGCCGGCCCACCAGCAAGAAAGGGGCCTCCCAGGAGTGATATGGGACCTTCTGTCTCAGGGAGGACTTTAGGAACCCCGAGGCTGCCCTGAGATTCTCAGTCATTCTGTGGGGATGTCAGAGAGCCCTGTTGGACCCAAACCCACGATGCTCCGGGCCGACATGCCCACGGCGCCCTCCTTCCAGCGGGCATTCACGTCCTCCTGCACCATTTCTGGGAACAGCCCCAGCCAGAGGAGAGGGAGCCCTTCCTCAGCTGAGCACCAGTGGGTGGAGACCAGCCCCAAGTCCACGCTGACCCTCCTGGGGGGCAGCCGGCCTGGCAAGGACAGCCCCGCGCGACCCCACTTCCCGCCTGCCGACCTCCAGACATCCTTCCACGGCCCCGAGCTGTCCCTGGCGGAGCCGCCGGAAGCTCTGGGTCCCCCGAGCAACCACGCCTTCCTGAGCTTCAGCACTGCCCCCATGGCGGGAGGTGGGCTCCCCGCCGGGGAGGACCCCGGGGCCTTGCTGGCCAATTCCCACGGAGCAGCCCAGGCCCCTGGCAACCCACTGACGGCAGCTGAGGCTGCCGACAACAGCTTCCTGTCCCACAGCTTTCTCACGGTGGCACCTGGACACAGCGGCCACCACAGCCCGGTCCTGCAGGGCCCGGGACTGGCTCTGCCCGGGCAGCCACCCCTTCCTGAGAAGAAGCGGACCTCAGAGGGAGATCGGTCTTTTGGCTCCGTCTCGCCATCCTCCAGTGGCTTCTCCAGTCCTCACAGCGGGAGTACCATGAGCATCCCTTTTCCAAACATCATCCCGGACTTTTCCAAGGCTGCCGAGGGGGCAGCACCTTCCCCAGATAATCCAGGTGATAAGCACGTGTCTGTAAACTTTGTTCAGGACACATCCAAGTTCTGGTACAAGGCGGACATCTCCAGAGAGCAAGCCATCGCCATGCTGAAGGACAAGGAGCCCGGGTCATTCATCGTCAGGGACAGCCACTCCTTCCGAGGTGCCTACGGCCTGGCCATGAAGGTGGCCACACCCCCGCCCTCTGTCCTGCAGATGAACAAGAAAGCTGGAGATTTGGCCAATGAACTTGTTCGGCATTTTTTGATTGAGTGTACCCCAAAAGGAGTGCGGTTGAAAGGGTGCTCCAATGAACCATATTTCGGGAGCCTGACGGCTTTGGTGTGTCAGCATTCCATTACGCCCCTGGCTTTGCCCTGCAAACTGCTCATTCCGGATAGAGATCCATTGGAGGAAATAGCCGAAAATCCTCAGCAAACAGCGGCCAACTCTGCGGCCGAGCTGCTGAAGCAAGGGGCAGCCTGCAATGTGTGGTACCTGAACTCCGTGGAGATGGAGTCCCTCACGGGCCACCAAGCCATCCAGAAGGCCCTGAGCATGACCCTAGTCCAGGAGCCACCTCCCTTGTCCACAGTCGTGCACTTCAAGGTGTCGGCCCAGGGCATCACCCTGACGGACAACCAGAGGAAGCTCTTCTTCCGGAGACACTACCCCGTGAGCAGCGTGATCTTCTGTGCGCTGGACCCACAGGACAGAAAGTGGGTCACAGACGGCCCTTGCTCGAGAGTCTTTGGATTTGTGGCCCGGAAGCAGGGCAGTGCCACGGACAACGTGTGCCACCTGTTTGCAGAGCATGACCCCGAGCAGCCGGCCAGCGCCATTGTCAACTTCGTGTCAAAGGTCATGATCGGCTCCCCTAAGAAGATCTGAGCCCTCACAGCCCAGAGACTCCAGAGGGGCCGACGTGACCCTGGTAGTCCAGCACCAGGAGGGAAAGGGGCTCCTCCGACTTTTCAAACATGAGAACAAACAACCTTGCCGCCTATGGTCTCAGTTGAGGGGCACAGCTCATGGATGCATTTCTGGGCAGAGGATGTTGGACATCAGGTGCGCCCATCCAGTCCCCGCTCGGGAAGGAACCATTCAAGGAGACGTGGGGACCCCTGTTCCTCACACTCTGGTGTTTATGGGAAGGAGGGGAGCCCAGCCTGCTCCCCGTGGCCCTGAGTGCCTCGTAACTGCCATGTCAGAGCGCTCCTGGCCAGTGGACACGCCAGGACCTCTGTCCTCCCACAGTGGAGATATTGATTAACCTGAGAAGGGGATGCATGTTGATTGAAGGTTCGTGCAGGTCAGGCCCTCCTGGAGCACTATGGCATCGTGGGCGAGGGACGATGTGATGGGCGGCGAGGACAAGAAAGGTCACATTGGTCACGGTGAGGCCAGAGCCCGAGCGTGGGGACAGCTCCCCACCTCCGCTCACATACCAGGTCTGAATGGTGCACTGGGCCATGAGAGGGAAAAGTGAGAAGATAGGAGAAAAGCCCCATTTCCATATAATTTATATTTTACTTTTGCCAAGTTATTTATGATAACAGTTTGCCTTTGTTATGCTGTACTGGTGTCTACATGCTGCCGTCTGCCAAGGTCAGGGTTCTAAGACTAGCATCTACTCCCGGTCAGATGTACCAGGAGTGCAGTATGGACTCTTTTGGCCATGCTCTCAGCTGTCATTGCCTGAGGGCGGCTGCCAAAACTGGCTTTGCCTCAAGCAGCCTTCCAAATGCTTGATCATCCATATTTGGTTCCCACAAGCAGCCTTCCGAACACTTGACCATCCACGTGTAGACTTGACCATCCACGTGTAGTTTCCTGGCTGCAGATACAGCCTTTCTGGGGAGGAAGGCCTTGAGAGGTGGGACATGATTAGTTTGAGACTCAGGCTTGCTCTGTATCGCATGGGGCCTGGGAAAGCTCACCACCCCAGAACTGTTGACCTGCGGGAGTGCTCATCTGTCTCCACCCGCCTGTTGTCTCCCACTGGGATCCATGTGTTCTGGCACCTGAGCAAGGGGAGGTGTTCTACACTGGTTCCCAGCTCTTCTGCATCATCTTAGACACCAAATCAGGCATGCTGTTTATGCTGATGTGCATGTTGCTAAGTAGAGGTCTGTCCACCTGCATCTGTCAGTGGTCAGAGGTTTGGGAGAAGCCAGTGGTCTTGCAGGCTCCCCAGAGCAAGAGACAGAGCTGGGCAACATCGTCATAAAGCCCTCGTCTCCTTCCCATCGCCCCAGACGTTCACGCCGTGGCTCTGCATCCCCAAAGAACTGTCCATCTCCTCCGCTTCCCAAATAAAGCACCAGCTCTTCAAACACCAGGAATCACCACGGCAGTCATCACACTAGTGTTTGAAAATGTGCTCTGTGGAGTCTTTGTTTCTAAAGTGGGGCAGAGACAGTTAGCGACAGCAGAGGTGGGATCCACCGAATCCAGTGGGCACTGTTTGTGTGTGTGTGTGAAAGCAGGTGGGTGAGTCCACTGTTTAGCTCCTATTGATGCACCAACACAAGTGCCTCGTTTCTGTGCCAAATGTTTGCCTTGATCGTTGTGGACCCTCTTCTCTGACATGTGGCGGCATGGCCAAGAGTGTGCTGGTGTCTCCCAGAGGCCTGATGCCTTGGTCGCTGGGGTGGGGGCATCTAGCATTTCAGTTTTTCATTCACAGCAGAACTCAGCGAAGAGGAGCAGAGGTTTGTGCTGGCTCCCAAAGGGGCCTCCTCCTGAGATGCTGGTCCACAAGTTTGACCCAGAGACTGCGGGCGAGGTCCCTTATCCTTCTGACAGAGGAAGAAAGGGCTCACGAGGGGTTCCGGACTTAGTAGCATCAACTGCCCCAGTCACAGAGGGACCTTCTCCCACCCGTGGCTGTCCTTGTCCAGATCATACAAGCCCTGACATTTGGTTTTTAAACTGACTGGCAGCTGAGCCTTTTTCTCTCAGTGGTCAAGGAAGTTTCCTCTCAGCAACCGGCTCCCTCTGGAGTAAGGAATGAAAGGAATCGAGTTTCCTGGTTTCTGAGGAGCTGGTACAAGAGTGTGTTACATATGTATAAAATGGAACAAGACAAGTCCGTGAATTTTGTGCTCAGACCTTGGGCAGCCCCACCACCCACACTGGCTCTGGGCAGGCAGGGAAGCAACATCCCCAGGCATCTGGGGTGCCCATGGGCACAGGCGTACTGTGCTGGATTGTGCATGAGGACTGCACCCCACTAGCATCATAGCCTCATAGCCAGAGCCTGTTAACCTGCTCATTAACCTATGCTGTATTCCTCCAGTGTTAACCTGTAAACGTGTTAAGTCACACCGCATTTAAGGGTCTCTGTGTGTATTCTTGGCATCAGAGACCTCATTGTGTCTCCTTCTCTGCCTTACCTAGTAGTGGATATTTTTACTTTTCTTATATTGTAAAGAATATATCCAGTATGTAAATGAATGTTCTATAAATCCTTTGTATAGTCATTTTCTCTGCTCTTTAAATATCACCTCTATTCAGAGTATAATAAAAGTATAAACTTGATAAGCCTCAGTGAGGCAAGTGTTTGTGGTGTTAGACAGAAGTGCCCCACAGGGTGTGTGGAAGTGTGGATGAGTGTGTGTGCATGTCTGAATATGCCTCTGTGTGTGTTTATCTGGGAG EMBV3_17427 AGAGCCCGCTGGTGCACCTGTTACTGTTGGACTTGCCACTGAGATCTACTGGATAAAGAA Gene GeneID:534280|RARA:XM_002695966:294_cdna Constitutive 0 NULL GeneID:534280 19 GENE RARA NULL retinoic acid receptor, alpha EMBV3_27987 CTGGGAGGAGAGACATACACATTCTGTCCCAAGCCTTTCCAGACATTGTTGGGGATCCAT Gene BVT0102_112044 + 0 NULL GK000011.2:97481277-97582041 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24310 TGATGTCAAGTTGGTTGCTGATTTCCGAAGAAGATAGAATTCTTAGAGAAGAACTTCAAA Variant GeneID:508663|ZNF277:NM_001083395:36_cdna 296^426 1 EMBV3_21736 GeneID:508663 4 GENE ZNF277 MGC148780 zinc finger protein 277 EMBV3_06471 GCCCTGTGTGCCGTGCTTTCTGTTGTGTAGACGTGGATGACTGTCAAGTCACCCAGTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18879 GTGAAAATGTTCTCCCACCAAGTGCAGAAGAATCTGGCTCCGTTCTTTGAGGCCTGGGCC Gene GeneID:533126|FAM115A:NM_001099054:700_cdna UTR3_Alt 2 NULL GeneID:533126 4 GENE FAM115A MGC138042 Protein FAM115A EMBV3_00172 TGTTGGGTCATTGCAGTCAGAGGTTGGGGAGGAGGTGAGGAGAAAGTGCTCTTGTTCAGT Gene GeneID:788673|HECA:XM_002690282:43_cdna UTR3_Alt 2 NULL GeneID:788673 9 GENE HECA NULL headcase homolog (Drosophila) EMBV3_01569 CAGAGCACCCCCCTCCGGGCATCTTCAGCTGAAGGGTGCCTGTGGCCTTCAGACGGCTCT Variant GeneID:511553|LOC511553:XM_002697753:269_cdna 670^824 3 EMBV3_30088 GeneID:511553 24 GENE LOC511553 NULL similar to Uncharacterized protein C18orf1 EMBV3_22452 ACGCCACCGATTCCTGTATCATGAGCATCGGATTTGATCACATGGAAGGCCTACAGTATG Gene GeneID:493709|ATP5S:NM_001007812:34_cdna UTR3_Alt 2 NULL GeneID:493709 10 GENE ATP5S MGC133848 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) EMBV3_03516 TCGTTGACTTCTGGAGCCGGGGTCTCACCCTCAAGGCAGTGCATAGTCACATCTCATATT Gene GeneID:616066|DAP:NM_001078058:35_cdna UTR3_Alt 1 NULL GeneID:616066 20 GENE DAP DAP-1 death-associated protein EMBV3_41454 GATGAAGCATCCTGAGGTGGAAGCCAAGATCCATGAAGAGATTGACCAGGTGATTGGACC Gene GeneID:527083|LOC527083:XM_002695064:434_cdna Constitutive 0 NULL GeneID:527083 18 GENE LOC527083 NULL similar to Cytochrome P450 2G1 (CYPIIG1) (P450-NMB) (Olfactive) EMBV3_20982 CCAAAGAGGCCATGGAGCACCCGTACTTCTGTCTGTTGCTGTTCCTCCCACTTTTCCATA Variant GeneID:282420|CSNK2A2:NM_174636:60_cdna 873^966 1 EMBV3_11832 GeneID:282420 18 GENE CSNK2A2 NULL casein kinase 2, alpha prime polypeptide EMBV3_22590 GAGAGCCCGCTTCGCATTTTGATTCATCTCGGGCCCTGTAAGGGTCACATCTTGTGAAAA Gene BVV0102_313841 + 0 NULL GK000010.2:21708080-21725200 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013111 1 XLOC_007996 Coding TCONS_00013111 XLOC_007996 NonCoding Coding - 10:21723847-21724619 - TSS9776 772 1 0 8.15902785051124e-05 5.15782435290836e-217 1.52517416327486e-05 8.86440329297505e-144 1.09402669538814e-155 5.05225428837018e-05 0 9.24716808511696e-281 2.36347457152715e-78 3.83367014284572e-180 3.85485013967906e-05 4.63172512028467e-06 9.59188438575074e-178 5.15379170201621e-14 0 0 0.00214854254935061 6.50022226260652e-05 4.83429622437562e-194 5.24841520575967e-05 3.95889146582789e-91 8.58635353615394e-05 2.71819899677946e-277 8.28008582326344e-05 1.71501509535487e-05 0.000372517843906885 1.2617622194944e-05 0.000397986729862056 2.66704265913845e-05 2.05059358842663e-299 XM_005211388.1 HAUS4 PREDICTED: Bos taurus HAUS augmin-like complex, subunit 4 (HAUS4), 7e-103 378 100.00 0.269430051813472 XM_005267772.1 HAUS4 PREDICTED: Homo sapiens HAUS augmin-like complex, subunit 4 (HAUS4), transcript variant X1, mRNA. 2e-53 214 82.30 0.269430051813472 0 noncoding 0 0 0 0 0.0322671373109283 0.776296995212095 0.052751356983245 0.286333629630468 AGCTTCAGCTGCCCCTTGCTGTGCAGGTTTGCTCCGGAGGGTCAGCGGGTGGCGCTGCGGGGAGAAGGAGCTCTGGGAGAGTCAAGCCGGCCAGTCCTCGGTCTCCGGCCGCCGAGACCGCCCTCGCCCTTGGGAATCCTTGGCTACCCAGACGGAAGGAAAGTAGGCGCCGGAGAGCCCGCTTCGCATTTTGATTCATCTCGGGCCCTGTAAGGGTCACATCTTGTGAAAATACCTGTAAAATCAATTTAACGTTCAGTGCAGCGTGTAAAGACAGCTCTAAGAATTTAAAAGACGCCTGAGTCAGAACATTTAAATGCTTGGGTCCTTGTAGGAGCGTTTTAACACGTCTGAGTGCAAAGGGTGGAGAATCGAGCCTGATTGCCCCCACCGTTCACGCCCTGTAAGACTTTTAAAAGGGTAAAGAAAATCACCCTAAATACCCCAAGAGAGCAGTTCCCCTAGGGAGGGAAGAACAGCTGACTTTTTTGAAATTTGGGTTGGTCCTCATTTCCGTGAGCGAAGTTTGCGCCTGAAGAATTTATTTGCAGGCTTAGATCCTTGATAAACAGAATCGCTAAAACACTGAGCTTAACTAAGTAGTGCCTTTTGTTGACAAGTCGATTGTGTTATTAATTCTTAATGTCTCATCCAAGGCAGGAGTCGTTATCTCAGTTTTGCAGGTGGGAAAAAGTTTGGCACAAAAAAGCTTTTCCCTTAAATTCACACAGAGGCAACTAGGCTGAACTGCAAATTAAGTCTAAGTATTCCG TCONS_00013112 s 5' 0 TCONS_00013112 s 5' 0 EMBV3_38555 ATAATATTGGGCTCTGGGGGTGCAGGCCTCCCCAGCAGACCTTCCACTGCACCCTTGTTT Gene GeneID:515534|RPL35:NM_001034495:20_cdna Constitutive 0 NULL GeneID:515534 11 GENE RPL35 MGC128342 ribosomal protein L35 EMBV3_36667 GAGAATGTTTCTTCTGATTTCTCTCGTCACCCCACCAAAGGCCCAAGCTAGTAAGCCAGG Gene GeneID:539131|GPR111:XM_002697273:35_cdna Constitutive 0 NULL GeneID:539131 23 GENE GPR111 NULL G protein-coupled receptor 111 EMBV3_02974 GTCCTCTGATGCCGTACTTTGATTTCTAGGAATTTATCCTGAGGAAATGGTCAGAGATGC Gene BVV0102_160050 + 0 NULL GK000013.2:31287496-31347072 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044946 1 XLOC_026317 Coding TCONS_00044946 XLOC_026317 Coding Coding RSU1 13:31344616-31554466 j TSS32919 3240 1 TCONS_00044946_1 277 0.351543209876543 10 0.984607980023731 0.000662484156247115 0.000480794303462707 0.000521570986867462 0.00034322981249705 0.000390541072019223 0.000228057275055236 0.000350311877390929 0.00025979435183079 0.000657245011433972 1.00721528567004e-05 5.36872660559255e-32 1.23728116286581e-63 9.09701880436605e-05 0.000844621108812348 5.26367805276998e-05 0.000210701250964718 0.000437249634686125 0.000256572555087238 0.00125251010026251 0.000757956772537244 0.00137952580366118 0.000216569447103466 0.000164293463966166 0.000494701609920695 0.000739094862525352 0.000484177454436045 0.000997507246994933 4.57688442718856e-06 1.31154593163558e-05 3.69695187228006e-93 NM_001040601.2 RSU1 Bos taurus Ras suppressor protein 1 (RSU1), mRNA. 0.0 1712 100.00 0.292592592592593 NM_012425.3 RSU1 Homo sapiens Ras suppressor protein 1 (RSU1), transcript variant 1, 0.0 1204 87.50 0.297222222222222 TCONS_00044946_1 sp|Q5E9C0|RSU1_BOVIN RSU1_BOVIN Ras suppressor protein 1; 0.0 555 100.00 0.996389891696751 5 coding 0 0 0 0 0.554373875379269 0.418984661706247 0.017323070057994 0.746420786383326 GGCCTGGAGTTGTTAGCGGTCCGTTGTGCGCCTGCGCGGAGTGCCGGGACAGGGCGTGTTCCTCGTTTGGGTGCTCGTCTTGCACCGACCGAGCGCATCTCTCGCTGCAGAAGTCTGTAGTTTCTGCCTGTTAAGTGCAGCCCTCCGCAGTCATGTCCAAGTCTCTGAAAAAGTTGGTGGAAGAGAGCCGGGAGAAGAACCAGCCGGAAGTGGACATGAGTGACCGAGGCATCTCTAACATGCTGGACATCAACGGCCTGTTCACCCTGTCCCACATCACACAGCTGGTCCTCAGCCACAACAAGCTAACAACTGTGCCACCGAACATAGCAGAACTGAAGAATCTGGAAGTACTTAACTTTTTTAATAACCAGATTGAGGAGCTGCCCACGCAGATCAGCAGTCTGCAGAAACTCAAACACCTGAACCTGGGCATGAATAGACTAAACACTCTGCCTCGAGGATTTGGATCGCTTCCGGCTCTGGAGGTCCTTGATTTGACTTATAACAACTTAAATGAAAATTCTCTTCCTGGAAACTTCTTCTATCTGACCACCCTGCGTGCACTCTATCTAAGTGACAACGATTTTGAGATCCTGCCGCCAGATATCGGGAAACTCACAAAGTTGCAGATACTCAGCCTTAGGGATAACGACCTGATCTCGCTGCCTAAGGAAATCGGGGAGCTTACTCAGCTTAAGGAGCTCCACATTCAAGGGAACCGCCTGACCGTTCTGCCCCCAGAACTAGGAAACTTGGATTTAACTGGTCAGAAGCAGATATTCAAAGCAGAGAACAATCCCTGGGTTACCCCTATCGCTGACCAGTTCCAGCTTGGCGTGTCCCATGTTTTTGAATACATCCGCTCCGAGACGTACAAATACCTCTACGGCAGACACATGCAGGCAAACCCAGAACCGCCGAAGAAAAATAATGACAAATCGAAAAAGATCAGCCGGAAACCCCTGGCAGCCAAGAATAAATAAGGGACTGTTTCTAAATTAGGAAGAAGCAGAAAAACAAATCTCTGGAAGATTTTGCCAAAGGATTTTGGAAAGCAGCATTTCTTAGCTGAAGGAATGGTGACTTCTGCCAGTGGCTGGTCGACGAGAGCTGTGAAACGGAGAGAGAAAAATACTCGTCTGTTTCTTGTCACTGCAGAAAATCTGCTCATATGAAAGCATCCTTCTAAGTGACTTTGATGATGCCAAAGGAGTCATGTAAATGTGCACACTCAATACCACTCCCAGAGTAGAAACTGCAGCGGCAAAATCATTCAACAAATCATTGTTTAACATCTGTGATAGGCAGCTTTGTTTTTACCTACAGTTGATATGTATGTCAGTGGAAACAGATCCAAGGAGAACGTTTGTGCTAAAAAGACTGCCAACCCTGAAATGTCTCAAAAGGTGTGTGAAGACGTAACATACTCAGGTGCATTGTCTGTCTCTACCCCTGCATCCTCTTCTCTCCATCTTACAGTTGAAACCCTGAGACCAGGACCCCTGGAACCCACAAAAACCCAACTAAAAATCCTGAGATGGACTTTGCATTTGAGTCAGAGAGGTCACTACCGAAGGCTATACTTCTTGCTTCAGGATAACTTCCTGAGAAAACATTGACCATGGGAAGAGGAATCCTCAGCTGCCATCACCTGTTTGGAAATTTGGTTGATATAATTTTTCTAGGTACCATCTTTGCCTCAGTCTGAATTTTCTAATTGATTTTTTTTTTTTTTTTTAGCTCTTGAAATTACAGGAAGAACAATACCTCTACTATGGTTGATTGGAAAGACTTTATCTAAAATTAAACTAGCAACAAAGCCTTAGTAAAAACTATCACAGTATAGTCTTGAATAATTTTTTTTTTAAGATAAACACTCTAGATAGAAATATGAGCAATACACATAAATTCACAAAGAGAAAATCATCTTCAAGAAACATGGGGGAAAAACATCTAGACTCAAGAGTAATCCAAAAAATACAAATCAAAGCAAAAATAAGACACGCGTAGCAATGAGAAATGTGCATATATTTTTAAAGGTAATATTAAGTGCTGGAGGAGCAGTAGGAGATAAACATTCTTTATACACTGCTCTTGGGAATATAAATTTCTCTCCAGAAAGTGGTAGAAATCTGAAAATAAGTAGCAGAACTTGCAAATTGTGTCCTCTGATGCTGTACTTTGATTTCTAGGAATTTATCCTGAGGAAATGGTCAGAGATGCACACACAGAGCTCTGTTTGAAAAATGCTTCTATAGGTTTATAGACACAATGGAAATGTGGTGAAAGCTAAATGCCCACATATGGAAGGAGAGTTAATTGTGTATCCACATGATGAACTTTTATGAAGATATTAAACATCATTGAACAATATCTAGGGGCAAAGGGAGATAATTATATTATCCAGTTAATTAAGAAACAAAAACAAAAAAAGACTTAAACTATGGAAGTGTGGTTCCAATTGTGGAAAAAAAGGAAATGTGTTTATAATATGTATGTACATAAAAATTAAATGGAAATGGACTGGAATTTTATGACTGATAAATTATTTCCTTGGTAGATTAAAATGTTTTAAATCTTTTTTATATTTATTCTGTACTTTAAATACTCTGTAATAATCCTGTGTATCTTCATAATCAGAAAATATTAAATGAGTATCTTTTCAAAATAGAACTGGTATATTATGCAACCCAGAAAATGTGATCATATATTTAAGTACAAAGCATACTATAAAATCTCAAATTGGCTTTCTGTTTCTTCTTTTTGTTATCATCAAAGTGCATTTTCACATCTTCTTCTGCAGTTTTTTTGGTTACTCAATAAGTGGATTAACGAAATACAGTTCAAAAGGTTGCACTTCATTCTCCCAGTTTTATTGTGATACATTTGCCAAACACTGTGTAACTTTAAGGTTTACATTATAAATGAATTGACTTATGTATATGGTGAAATGATGAGTACAGTCATTTTAGTTAACATTTATCATCTCGTATTAATACGGCCCTCCCCAAAGAAAAATAGTTTATTTCTTTGTTTTGAGAACTCTGCTCTCTTGACAAGTTTTAAATATGCAATCCAGCAGTGTTAACGTGATATCCATAGTGCTTATTTATACCTGGCACTTTATACCTTTTGACCATTGTCATCTAATTCTTCCACCCTCTCTCCCCACCTCTGGTAACTGCAAACCTGATCTCTTTTCCTATCATTTTGATTTGGTTTTAATTTTTCGAATCC EMBV3_03719 GGAAGGGTCCTGGCGCTAATGTGAACTTTTTTTTTTACTAGGATTGTAAAAGGAAAATAA Gene GeneID:790870|LMAN2:NM_001101309:52_cdna Constitutive 2 NULL GeneID:790870 7 GENE LMAN2 NULL lectin, mannose-binding 2 EMBV3_24736 TAACCTTCGCCCCTTTGTCTGCCTGGGACATTATCGGTCTCAGTCTTGGTCGAGCTTTCT Gene BVT0102_190385 - 1 EMBV3_26011 GK000018.2:10263074-10294994 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26157 TGGACGAGAAGATCTTCTGTTGCCATGGAGATCCTCAAGCCCGCTGACAAGAACAAGGGG Variant GeneID:516175|PPP1CA:NM_001035316:21_cdna 475^833 1 EMBV3_00414 GeneID:516175 29 GENE PPP1CA MGC127348 protein phosphatase 1, catalytic subunit, alpha isoform EMBV3_29661 CACTAGTTCGTCTATGTGGGTGCCAAATATTCCAGCAGCTCTTGCTGAAGGGACCGTCCT Gene BVT0102_035515 + 0 NULL GK000017.2:63646118-63654551 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13953 AATCCAAATGAGAAACATAATTGCTTCAAAACATTTATATAGTTGGAAAGTTATATTTAA Gene GeneID:538564|COL8A1:NM_001101176:4_cdna Constitutive 1 NULL GeneID:538564 1 GENE COL8A1 NULL collagen, type VIII, alpha 1 EMBV3_05706 CGCTGCTGGTCCTGCGACTGCTTCTCGCTGAGGCCAAGTGAGGTTGGTGCAGGGAGGAGG Variant GeneID:539433|DCAF11:NM_001014954:228_cdna 314^548 2 EMBV3_42226 GeneID:539433 10 GENE DCAF11 MGC137750 WDR23 DDB1 and CUL4 associated factor 11 EMBV3_09200 GGCTTCATCAGCATGCACAATACCCAGGAAGATGTGTTTGTTCACCATACGGCCATCACC Gene GeneID:100301262|LOC100301262:XM_002700148:22_cdna Constitutive 0 NULL GeneID:100301262 X GENE LOC100301262 NULL similar to cold shock domain protein A short EMBV3_17707 AGTAACGATTATGCAAATTAAACCCAGAAGCTTATTTCAGTTTTGAAAAATTTGCCTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11003 TAGACGTCGCGCGGCTGAGAACCTCCTGATGCTGTTGTACTTGCACATTGAGAACTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21198 ATACCCTCTGTGCGTTGCCCAAAACTCAGCATGACTTCAGCTCCTTCGTGGTGGACATGT Gene GeneID:100337148|LOC100337148:XM_002699833:5_cdna Constitutive 0 NULL GeneID:100337148 X GENE LOC100337148 NULL nuclear RNA export factor 3-like EMBV3_35965 CAGAGCGACTGGTTCTACGAAAAGGAATCAGGGGGAGCTTGTGGCATCACTGGAGTCATT Gene GeneID:540878|MGC152575:NM_001102249:11_cdna UTR3_Alt 2 NULL GeneID:540878 16 GENE MGC152575 NULL hypothetical LOC540878 EMBV3_11760 GTGGGTTTAAGGGAGAGAAGCAATGGAGGAAGCAATGTGAATTTACCACCTGTAGGCACC Gene GeneID:533903|LOC533903:XM_002696374:83_cdna Constitutive 0 NULL GeneID:533903 20 GENE LOC533903 NULL hypothetical LOC533903 EMBV3_06077 CAGAGAAGAAATGCAGTCTGCACTTTTAATGTACCTTTTAAGTGTGTGTAAGTGGAAGGT Gene GeneID:615685|LOC615685:NM_001101246:34_cdna Constitutive 1 NULL GeneID:615685 4 GENE LOC615685 NULL UPF0452 protein C7orf41 homolog EMBV3_12121 ATGGTGTCTGAACTAACCCAGACCATCCCCACCCTTTCCTCTGTTACGACCGAAACTTTG Gene BVT0102_063973 + 0 NULL GK000030.2:14311078-14516501 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246347 TCONS_00246345 TCONS_00246348 TCONS_00246349 TCONS_00246346 TCONS_00246351 TCONS_00246350 1 XLOC_150959 Coding TCONS_00246349 XLOC_150959 Coding Coding LOC787476 X:14293432-14374928 j TSS184709 21185 1 TCONS_00246349_24 6081 0.00722209110219495 20 0.740290815387447 1.29350331030108e-05 7.94711114465869e-05 5.02718421186791e-05 4.38252260973645e-05 4.96518564422759e-05 4.54493073173864e-05 7.45207872931167e-06 1.49000323863812e-05 8.60322779207607e-05 2.06789878519565e-20 1.15892472943132e-05 2.12396988275832e-06 4.9689309188356e-06 2.04659154037472e-05 3.38855305088853e-09 0.00128063233641854 0.00020648349338543 0.000472182446296677 5.24348227992918e-05 9.94964511864053e-05 6.94732594187596e-15 0.00029771945347449 0.000231443049000106 0.000667485909430768 5.37812614681194e-05 3.7578296414123e-05 3.90989593740429e-05 6.31620834315895e-05 6.78198988930084e-14 6.81212172319457e-06 XM_003581800.2 FSIP2 PREDICTED: Bos taurus fibrous sheath interacting protein 2 (FSIP2), 0.0 5907 72.91 0.484871371253245 NM_173651.2 FSIP2 Homo sapiens fibrous sheath interacting protein 2 (FSIP2), mRNA. 0.0 7315 73.09 0.583950908661789 TCONS_00246349_24 sp|Q5CZC0|FSIP2_HUMAN FSIP2_HUMAN Fibrous sheath-interacting protein 2; 0.0 5747 53.30 0.999342213451735 0 coding 1 1 1 1 -0.0429868764997926 0.680866452764141 0.0327223449807947 0.814589167708408 CCGGCCCCCTGGGGGCTGATGGGTGGCCATGGACCGGTACCTCAATAACTGCTACAAGGCTGCCCAGGCCGCCGCCTCTAAGGCGGCAGCCAGCAGCCTAACTGCCAACAGGGAGCTGTGTGACTCTGCCTCACAAAAAGACCCCATCACAGAGGTCGGAGCCACTGATCTATTAGATCTTCCTCTTGGGGTGAAGCTTCCAGTCGTTCCAGGAAGTAATAATGTTTTCTATACTACAAATTTAAGTGAAAAGCGGTATCAGCCTACTTCTGACTTTAACCTGTTTGATCCTTATTGTCAGCTTTTACAAACTGGCTATAACAGCCTGCACGATCCACATTTAAAATCATACTATAGGCGAAAAGATATCTTGAGGAGATTAAAGAAAGGTGGCTATATCACCAGCAATAATAAGGTTGTATGCACCTTGAAGGAATTGAATAAGTACAGGCAGTATCTCACCCGTTTGAAATTAGACTCCGAAAGAAACTATGTAAGAGAACAAGAAATGATGAAAAACAAGTAAATAAATTGTGTGAAACCAAGAGAGCCTGTGACCGTCATGGCAGCACACAGTTCCAAGGCTGGCTGTTACAAGAAAATAAACGAACAACTCCAGACCAAGAGCTGTTGATAAAGCAAAGATATTTAGATATGATTAGCTTGGAATTAAACAAGCTTGAACACACGGCAGAAAAGCAGAACGTACTCCGGATAAAGGAAGAAGAAAGACGACATCGGGACCACGTTAGAAGAAAACTTAGTCTCTGGAGACAAACTGAAGAAGAACGGAAAACACAAGAAATGTTACTGCTGTCAAAGATTGGAGAAGAAGTAAACAGAGAAGCAAGATATGAAGAACAACGTAAAAAAGTCAAAGATGCTCACCGTAAGAAAAAAGCACAACTCGAGAAAAAAATCCCTTATTATTTACCAAAAATGCAAAGGAATTACCTTCAGAGAGAAGGATCAGAAGAAAATGTATTTGAAAACAGAAGTCAAGATGAAACAGAAGATGAGAGAGAAACAATAAAAGACAAAGCTTCTTATCCAAGGATCAAGAAAATGAGTGTCACTGCTGGTCACCAGAAGTCACACCAAGGACAAAAAAGACCATCCCAGCATTTGTATAGTTCTGTAAAGACTCCTGAAAGAAGATCAACCTTGTTGCATTCTCCACATGATGTACAGAGTAACACAACAGAACAAAAGAAAGATAGAGAAACAATTAGGATGTCATATCCTTCAAATGATGGAGAAATTACTACACTTCAGAGTCCAGTTGTTTCTGCGAAAACACCAAGTATCTGTAGATACTGTCTACAGGATACTTCAAAACAACAGGTGACACGTGCTGATTTGAATGGGGAAAAGGCCAAGAAATCAAGCTTAAACTATGAGCCAGCTCCTGGAGTCTCCTTTATTCACGACTCACCCATTAGACAAGACTACCGTCCAAATCGCTGTCAAGAGAAAGTAACTTCTGAAGAACTGAACAGTATAATTCAAAATGTAATGACCTGGGTTGTGGCTGCAGTGACCAATGTATTATACCCAGCCATCACAAAATATGAAGAAAGATTGCAAAATATTACATGCCCAATGCCTGATAACTCCACCCTCTCTTCTGATAGTGAGAGTTGCTGCAGCACATGCTGTGAGACATTTATGTATGAAACAAGTAAGATGGTTCAGGCAGAGCCCTGTACAGAGGCAGCTGACAGGTCAATAGAGCAACCAGTGGCACCATTAAAATCATCTCTAGCCCGTAAAGAAAGAACAGATGTAGAAACAACATATCACAGGAAAGAACACTTGGAAAACAAACCTAAAGCCCCCAAACCTGAATATAATGAGATATCTGAATCTGCCAACCTTAAAACCTGTAAATCCGATAGTCACCTTGTTGTACAGATTGAAGCAGGCACTAAGAAATGTAAAGATGCTACCACCGAAACAGATAGCCTAGAATGCCAACTGTCTAAAGATGAAAAAGCAAAAGCTATCAATGAGATGCAGGAGTTAAATAATGTTTTTGTTAACTTTAAACATCATCTAAAAGAGGAAGCTGAGTTGATTTTAAGAAACATTTTTCAGGAAATGGTGTCTGAACTAACCCAGACCATCCCCACCCTTTCCTCTGTTACGACCGAAACTTTGCCTGCCCAAACTGACACTGACAAAGGAGACTTGCTTTCCAGTGTTGATATTTCCTCAGCAGCTGCTGAAATTATGGAAAATGTGCTTGGGAAGTTACAGTCTGCAGTTAAGAAAACATGTACTGAGGAATTTTCACCAGGAAATATATCAGTTCACTTTAAATCAGATTTAGTCAGTGGAGAACATTTTATTTCTCCAAAAGAAAAAACTTCAGAAGTTTCACTGCCTTATGCTTTGGAGAACATGAATGATGTTGCAGAGGACATGGTTCGTGTGATTTTAGAAAAACTGACGGTCCTTGCATCTTCTAAGCAAAGTGAATTGGCTCATCTTAAAATCACTACTGACCCAGCTTATCAGCAACACAGAGAAGATCCAACATATACGTTCCTTCAAAGAGCCAGCAAAGGGAAATCCAGTGCTAAGACTGATGCTGCCAGTTTGATTGGCAAAGAAGAAATACAAAATTTAGTGTCAACTATTTGTTCCAAGTCCTCTCTGGTTGGTTATATAAAGGAAGCAATCAGCACTATACTAGGTTATATACAAGTTGGACTTCATAATGAAAGGCTAGTTGCAACTGAAGAAACAGTGATCATCCTACAGCTACTTGATGATCTCTTGGCTCAGCTACATCAGAAACCAGTGAAAACAGATGTCCGAAAGAGCAGACACTCCAGACTGAGCAGTCCCTCCGGCACTGAAGAAAGGAACAGACTCACCAGGACCGGAGTAGCTAGTGCTCCTAGGTGTGGGAGCCTGTTTCCACCTGTTAATGTTCCTGGTGTGGCCCTTTGTTCTGAAGACAAAAATGAAGAAATAGACAGAATTGTAGAAAATGTATTGATTTCACCTATCAAAGACGAAAAAGCAAAATTACAAGAACAGGCTCCTGACTACTGGTTAACTGGGGAAAACAATGATTTTAAACGCAAAAGAAATATGAACTTACCTACAAAGCCTGCTTATGGACGCAAAGTAGCATTTCACGATCAGGGATTAAATACTGACCTTTCAACTTTTAATAAGGACCCTTTAAAGGACAAGCCAGGTTTGAATAAAGACATTTTGCTTTTCAGTCAAGATGAAACATATCAAATACAAAAAGCCTCAGAAGATATAATTAGGAGTATTTTAGCAAAGACGCTCAAAGATCTATCTTCTGGGCTGTCTGATCACTCAGATTATGAAGATGGTAGAGAGGCTTCACTTCTTAACTCAAGAAAACCACAAGATCCGTCACATCAAGAATGGATGGACCAGATGTTCTCTGTGTCAGAAATCCATACGGTATCTCAAGATATTGTAGATGCTATATTAAAAATACTTCACATAACTTCTCATCATATTATTGAACATTCTTCATCAGTACATCAAACTTCTCTAGATAATGCTGACATACCAAACAAAGAGTCATTACAAATATGGTTTGACAGTAAAAGGAAGATGAAATTTTTATCTGCAGTTAGCACGGACCCTACAAAACTTCCCTGGGTAGAATCTGGAACAAGTGGCTCAACATCAGAATCTGTAGATAACCTTAATGATAAAATCATTAGCACAGTTTTTAAGAAGTTGGACTCATTTATTTGTCCAAAATTACAAACCTGCTTCAAACCAGAAAGCCATGCTGCCCATTCAAAGCCTGCTCCTGATAAGAAATCTTCGTTTCGATCTCACCTTAGTACTCTCACAACTAAAGTGGTAAAAATTGTTTTGGATGCTATCCAGAAAGAACTACAACACAATAAGAAAAATCTAAATGTTAAGAAGAATAGCCCTCCCAAGAACATTAGAGATACAGGATTTTTTGCTGATGCTGAGAATGAATTAGACTCTGTTGTCACAAAGCTAAATAATGACATTATGACAAGTTCATTAGCTACTTGCATTTGTGAGGTGTTAAGTGGAAACACAGATAAAAGTAATATTTTACTCCCTTCAGATAAGCTAAGGTCTAAAATCTCACATGGGACTGATGGCATTGATCAACAAAAACTTTTGCCTTCTCATCGCCCTCACATGCAGGAGGAAGTTCACCAATATACTGGATTTCAAGTGTTAGATAAAATTGGAGATGCCGTGTATGATATGTTATGTAAGTTCACTGGAGACCACCCACATTCTCCCCTATCTGATGAACAAAATACAGAGGGGATCAATAAGAATTTGAGAACAACCAGTACACTGCAGTCCAGTATTAAGCTCATTTCTCATACAATTCTAGAAGGTATTGTTTCAAAACTATGTGGTGTTGAGACAGATGGCATTTTCAGAAATTCAGAATTTAAAGCCATCTCAGAGCATGTTGACACTGACAGCCTGTCATTTGCTTTGCTTCTTGAGGAAATGAGCAGATGCTATGACATAATCTCAACCATAGCATCCAATGTGACCTGGCCAGGTAGCCAAGAGGTAACTAACAAGGGGAAAACTACTGCCTCCAAAATAAGAACCACACAAAAAAAGCATCTGAATAAACTGAAAACCTTGGCCTCAGACATCTTTGAAATGGTTTTTGCTAAGTTGGAAGGGTTTGCCAATAGAAATTTAGAAAATCTTGGTGCTATAATCTGTGGAAATAAACAGGACAAGACATACTGTGAAAGTGAAAATACCAACAGCTGTGGTAACACACATGAAAAACGATTGCAGTCGACTTTATACAGGCATGCAAAAAAAGTGTCAAGTACTATTTTGAAAGCTCTTCAAACTGAATTAAACATGAACTTGCCAGATTTGGAAACATGTATAAGTAAGCCACTACAAGAGAAACAAATACTTAAGAGTTTAGTCAATTTCATTTTAGATGCAATTTCTCCAGATATGTTTAATGAACCTGAACCAGAAGAGAGAGGCATTGAAAATTACAGATATAGGCCAATCTATGGAAATTTTCTTCCTGGAGGAACTGACCCAGATTCATATCTAGAAGATCCTGCAGATACAGAGAAAGAAAGTGCTGGGGAGGAAAGACCAATAGAAGATGAAACTAAATCAGATTCTCTTAAGCAACAGGAACTCGAAAAAACACTAAAAACTTTTGAAGTAGAACTCAAAGAGCCAAAAAAGTCCCCAGTTGTGCCCATTGTAAGAAATATTTTGAATGAAATTTTTCAGAATGATTTAATTGGTCAGTTAAAGGTGTTTACTCTTCCCCAGTCCCATTTATGTGACATTCCTCATGCTGATGATGAACCATTTGCTCAAACATCTGTTCAGTCCCTGGATAAAACAGTGGGCCCTTTAGTATCTGAAGCAGATGTAACCATTGTTGCAGATGATGTCGTTAGAATCATATTTCAAAAACTTTATTCTGCTGCCATGACAGATAGAAATGAAAGTGAAAATAGGTATAATACTATCACCTTTCCAGCAGATACCTCTTTTCCTAAACATACCTGTGGAGGAAAGTCCCCTGTTTATTCTACCATACTGGACAGAAATCCATGCACACTTCAGTCCACTATCAATATTGGGACCAAAATAAATGTAGTTGAAGATATTATACAGTCAATATTAACAAATTTAGAAGCATTTGCAACTTCCAAAGTAAAGGCGCTCTTTTGTCCTCACAGCAGTTTCCCAGTTCCTGTGGCTTTACCTTCACAGCAGGATGAGATTGCTTTACACCAACCATGGTTATCCACCAAAGATTCATATTCTGAAGACCAATTTTCTTGTTGCTCAATGGATCACAGTAAATCAGGAAAGACCACCTCAATATGTCAACTGAGTACCTCTAAATTAAATATGTATGCAACAGAAGTGGCTAGACAAATTTTACAAGGAATCAAACATAAATTAGATCAAGACATAAGAAGTCCATTCTTAACTCAGAGTGTTCTGGCTTTTGAAAGTATTCCAAGTCAGGTTGTTAGCACAATGTTAGATATTGTGTCTACTAAAGGCAAATATGAAAAAAATGTAATTGACAGAGAGACTGATCCAGTTGCGCCAGAAGATATTATTGAAAAGCTATTCAATAAAAGTGATTATCGTAAAAAGCTTCAATTTCAAATACTAGATACCATTGAAGGTATCTTAATTGATATCTGTGAGGAAACAATAGATGAGAATAATCTCCCACTTGCTGTATCCACTCTTAAATGTAATGTAAGTGGGAGACATTTAGAAACAAACTCTGAAAGGGACCCTAGGTATGCAAATAAGGCTATTCTTACACTTTTAGTTCCTAAGGAGTGTGTCGCTATGATTTCCAATGATATGGTGGATATTGTTCTTCAAAATCTCATTTCTGCTATCATGGTTTGCATCAGTGCAAATGATTCCATTTCTCCAAGATTGTCTACAGCATTTTCTGATGCATTTTCCAAAGCAGAGCATCAACAATCCCCTATTAAAGACTCAGTGAATGGAAGGGCAGAGCATCAACAACCTCTTGTTACAGACTCAGTGAATGAAAGGGCAAAGCATAAGCAACCTCCTGTTATAGATTCAGTGAATGAAAGGAAAAGGGAGAGATTTCCTTTTGCAAGAAAGGGAAGAGATATTCAGCTGAAATCAGCTCTTTCTGATGATAATCAGACACCTGTACTTAAGAAACAAGATGCCAAGAAATCTACCCCTGATCCATGTAAGGAAAATGCTCACTTTATTACTAAAACTATTTTGAATAGATTAAAATCTTTCGCCACAGAAAGAATAGATTTGCTACTTATTCTTGATCCTGAGACTAGAGAAAAACCAGATGTTGGCTCAGAATTTACAAATTGTAAACAAAATGACAGTGTGTTTCTTGAATCAAACCAAATGCCATTAGATGTGACTGTCCCGAAAATATCAACAGCTGGAACCATTCTCAATCAAGAAGTCACAAATTACACATTAGCTAATTACAGAGAAAACCGTAGACCTGCAATTCATATATCACAAGCCAGTCTTAAGGAATATGCTGACCTAATCGCCAATACCATTTTGACGCTTATAAAAAATGACATAGACCTAGAAATCCAAAAGATGTATACATATCAGAACAATACTTCATTTCAAGACAACATCATTGCAAGTAAAACTGTCAACGACATCTTAAAGAGTTTATGTAATAAAATATCTTTGAAGGCAAGTGGCTTTTACTCAAAGCAGGACCCTGATCTTTTTACCCAACTAGCTGTACAAAATGAAATAGTGCCAGGTCAAATAAAAATGGAAGACAACACCAAACTGTCTCTCTTTTCAAAATACTCAGGGGAAAACCAAAAAACACCAAAAGTGGAAAACCAGAGAAGGACATTGGAAGAAATATTTAGAAATGGAGAATCTGGACAGGAAAAAACAAAGTCTTTGTTAAGTATAGTTAAGGAAATTTTAAAGAAAGCATATCAAAGGGTATTGGAAAACACAAAACATTGTTCTCCATTCAGTGAACTCCCCCATTTTACATCTGATTCTAAAAGTAAAACATCACGGAAAAAAGCCTTACAGTCACATATAAGCAGTGTTGCAAATGACATAGTTGAAAGTGTTTACACAAAAATGTTCTCAGTAATTATGACCTCGTTATATGAAAACAGTGAGACCAGAGGGGAAATGGAAGCCTCTGGCAGTGATGGATTACTGATGAATCCACCATGCTTTAGCGAACTGAAACAAGCAGAAAAAAGCAGTGTTCCCCCTAAACCTGTGATACCACAAGTTTATCCTTACACAGGCATTGGAAGTGTCAGTTCATTGGAAAACACCTTATTGCAATTTTCTCCATTGCAACTGGGCGAACACTTGGTTCAAAAGGTTCTCAAAAAAATCACAGATTTTGCTTTGCTGAATCTAGAAGAGAATTCATCCCCTAAAGGTCAATCTGATGAAATTCTGAGGCCATGCAATTCTAAAGCTAGCCCCAAGGGCAGCCCTAGGGCAAGTGTTAAGACAAATTTTAAAACAAAATCAAAAGTTACCTCTTTGTCTAAATTTGGAACAAAACCACAGCTCAGACCTAGTGGAGCTAAAGCCCAAAGCAAAACCAAGTTAGGTCCTAGAGAGAAGACCCTAAAAGGTAGCTGGTCCAAGACTTCCGTTGGGCTCCCACACCTACTGTCAATAGGGGAGGCCAAAAGTCCCTCACTGAGAGCAAAACTCCCCACTGCAGAGCTAAAAATGTATGCCAGGGATATACTACGTAATATTCTGCAAACAATTGTGAATGAATTTGAAGAGGTGAGGCAAAATAGAGCAGTGGCAAATGTAAACACTTTACTTTCTGATCAAATTGAGAGAGCAAGTGGAATAGTGAGTGCAGTTTTGCAAGGACTACACGCTATGAAGAATAATTTGGCCAATCCAATAAAGGGCTCACATTCAGATGATCTCAAACTTCCACGGGGGTATTTTAGTACAACCTCTGCTGCAAATCCAGAGGCCCATTTCTCTTTGGAGAATGTTTCTTCACAACTAGATAAATTCTTTCCCAAAGAAGTTACTTCTAAACAAATGTTTGACAAATGGCAAACAGAATCAAGCAACATGGATAACGAAAAATATAAGCTACTGATGATAGCCGAGGCTGTTTTGAATGAAATTTCAACAAAAGCAAAAGAATTAGAACAATCTGTTTCACTTTTGTCACTTCTTGAGCCATGTGAAAGCAGTCACCATCATTTTAAAAGAGCTGCTTCTAGAGTTTGGGATTCTCAAGCACAAATTAATGTATTTGGCCAGGAAATCATTAAAAAACTATTTGAAAAATTAGAGTTGTGCTTCTTGACTCAGATGTTCACAACGGATAGTAAAGAAACACTACAAAGCAAGGAAAAAACTGCTGCTAGAAGAAAATGTGGTTCCTCACGAACAAACAATCTCAACGATGTACCAACGTATAACACCAAGTTGAAAGACAAAACACTGGGGATCGCTGGTCACCAAATCACTCAAGAGATATTGGAAGGGGTTCTGAACACCTTAGAGTCATTTGCAGACCTACAGTTTAAACATGTCTCTACATATGCTTTTTCTGAAATTGTGAGAACACCTATTGAAAACTTTTTTGCTATGCAACAGAAACCACCAATGAAAACAATATTTCCGAAGTTACAAACACTGACTATGTTTCCTGATGAATCTAAACCAAGTAGTATGATTTCCCAGGAAAACATAAACAACGCCTTTCAACAGCTTTACTTTTTCTATTCAGAATTGCTTACTTATGCTGTTAATACTGTCACTGACATGCTTAGTATAATTAAGAACAAACTAGACAAAGAAAAATGCCACAAGGAACCATCTTCAACTAGCATGTTTAAAGAAAACATCGTAGCAAGTCAGATCATCAGCACACTGATAGACCAATGCACTGATTCCTATGAGTTGATGATCAAAAGCCATCCAAAGGAAAATCTGCTCCAAGGAACTAAAAATGCCTGCACTGTTAATTGCTCCCGATTTACAACTGGACCAGAAATGTCCACTTCAAAGTCAAAGGGAATTAGCTGCTGGGATGATCCTCCACAAATCTCCAGCTTGTTGTCTTATTCAGAGGAAGATATGAAAATAAAGGACAAGACTTCCTTAGATGTACCTTCATACGTCAGATACTCTATAGGAGGAGATTCAGCTAAAACCATAGAGCCAATGGAAGGGCTCGAATCAGAGTTTAAACCATCATCTTCTAGAAGTGAAGCCCAAGTCTTCAGCCATTTTGATCAAGCTGTGAAAGGAGACTACTCTCTCCCAGAAGGCACTGTCTTACAAATTTCATCTCAGAAATCCAGTGACTCTGCACAGGCAGCACTAGAGCACCCCATGTCTTTCAGAGAAATGGAAGAGGGTGAAAATCAAAGAGTGCTTCACTATGAGCCCCTCAAACCAGTTGTTAACCCAGATGAAATACAGACTACCATTTCTTCACTCAAAATATGTTTAGCTGCAGAAGATATTGTCAATACCATGCTGACAAGTTTTGGCCTTTCAAATCAAACATCACACACCACTGAAAATATGGAAACCATGAAGCCATTTTATATATCAAAGGAAATGCTTCAGTGCCTAACATCTGAACAACTGAAGAATGAGAAAAGCCTACTTAAAATATGGGAAAAAAGAAACAGCTATGGAACTGAAGACGAAAACAAAGGCCCTGTGGCAAGTGGAGAAGATTCCATTTTACTGGAAAAGTGGAAAAATAAGCACCCGAAGTTAGAGAAAACTCTTGAAGAGCCTGGAGTCATTGCTTTTGCTGATTGGGAACTGGGACCACATGAAGTCCACCTAGTAGCAAGATATGTTACTACATCAGTGGTCACACATTTCAACAACTTTGAAACCAGAGGTCCTGTTGATGAAAAAGTATCTATTAGTTCCACACGACTAAGCAAAAAATATGAATCAAAACAGCCTCTAAGAAGCATCAACACTGATTCTTCACTTAATCAATTTTGTGAACATCTCACTGAACTGGTTATTTCCTATATAATTTCTAGCATTTCTGATTGTACCAAAGATGGTGAAACAAAACAGAAATCACTAAGAAATGAAGACACAACTTGTAGCGAGGTTATTTTAATTCATTCCCAAGTGTTTGAGCATCAGTCAATTTCTATCAGAGGACTTGCTTTAAGCATTTCTGAGGTCATTATTCACATCCTTTTAAATAGTGACATTTTAAAGGAAGATGTTACAAAAGTGGTTTCTATGAAAGCAAAATATATTTATTGCCCAAAAGCAGCTGTGGCTGACTTCAGTGATCTCTTTCAGGATCTCTTAATAGGAGTGATCCATGTTCTGTCCAAAGAAATAGGAATAAATCATCACCTTGACAGCAAAGGAAAAAACAAATCACTCTCCACACCTAAAAGCCATAGTTTGCTCAGTTGCAACAAAGCGAAAACTGTGAAAAGACAGATACATGCCAAAGGTTGGAAATCAGCTCCTACTCACCAACTTAATCAACTAATACAGAAAAGTAAACTAAATTCTCTAGCATGTAAGTTAAACACTCTGGTTGGCAGCCTAAGATCTCCTGAATCCAAAGAAGTAGTCAACAAAATTTTCAATATTGTTTTCAATTTGTTTTTGCCAGATGAATGCCCAAATTGGGATACAGATTCTGGTAAAACAGCAAGAAAAATGTTCCTATTTTCAAATAACCTGCAAAGTCATAGAATTCCTAGAAATAACCTAGGGCTCTCCCCTAAATCAGCTTTTCTTCTGAATGTTGTGTGTGAGAAACTTATTAGAATGCTTTTGGAAGAATGTACAACCAACAACTTTCTTACGAATAGTCCTCTTTCTGACGAAATATCAATAGAAGGTCAACTGTTCAACACACTTCAAAGTATAGATGATTATTCCAGTTTAACAATGGACTATGGCTTACCATTTGAGGAATATGACACATCAGACCTTTTTGAAAATTCGGCAGAAATAGATCAAGAGTCTATGCTTAGTATTATTTCCCATAGCTTGGTAAAATCCTTAATGGAAAAATTGTCATGCGGTATACAGCAACCTCCCAGAAGTCCACCAGTTACAGACAAACATTTAACATACAGGACAAGCGAGAGACTTCCCAGTTTCCCCAAAGCAAAAAGGCCAGGGTTAAAAGAATCAAAACAGGGTAAAAACTCTGCGCGATTCATGAGTTATGATAGCAAACCTCTGACAGGACCATCAGATAATCTTAGGGTGATTCATTCCAAGATGCAAACCCCAATCAGTAAGCAATTTTCAGGAAAATTCCGTTCTCTACCTCCTCTTCAAAGACCAGATAAAAAGACAACAGCTTTTCTTAACATACAATATCCAGGAGGCATGAACACGGGCGTGTACTCTGCCACATTTCTGGAGGAAATAATTGTGGACATTTTTCTTAATCTCACCACCTCATTGCAAGGCAAAAATGTGAATATCACTGAAGCCCAGCTTAATGAGATGAATATATTAGATATCAACTGCGTGGTGAATGAGTTTAATACCGCTCAAGTCACTGTTTTACGGGACATTGAAGAAAAGATGTGTTTTACACCAGTCTATAAAGAAACTATTAGTAAGATTGGTGACTCCGTTTATAATGATGTATCATGGGACTACACATTGCAAGTTACCTGTAGTGATCATCTGGCATATGCTGCCATGTCAATAGCAGAACAGATAACTAGTGGCATATTGAAAGAGAGTATAGACTACCAGCTCCCATTGTGCTTTATAAGAAAGCTCATGCCTAATTCATATCACCCTCTCAAAGCTGAAAATATACTACTGAAACTTCAAAACAACCTAAGTGAACTTAATTACCAAAGTCAACATTCAACAGGCTATATCACTATGCTCTCCTACTCATTTTTAGCAGATGTCATCAGAAGACTATTATCTCAGCTCATTCTTCCACCCATTGAGGCTTTATGCTTAGGAACTAAACACCTAAAGATATCGGATTTTAATGAGGTATCCACCTGTATAATAAATAAAGTTTTGTTAGCCATTTCAAAGCATAAGATTTGGCTCACTAAATATGATTGTCAATGTGTATATACAGAACAAAACCTTCAAAATATGGTGGAGTCTATTTATAATAATATTTTGCAGATGTCTGACTCACTTGCGTCAATACAGAAAAGCATAGAAAGCCAAAGCCCAATTATGGTTGACCGAATGGCCGGTCTTATTATTCAAGAGATTATTGAAAATCATCTTCAACCCTTTTTGTGTGAAGAGGGCTTACCTCATTCAATGTCTCCATTGGATGAAATATCAAATATGGTTAAAGAGGTTCTCGGTGAAGTCACAGGGTCACACAGACCCCAGAAGTCATCATCACTAGGTATAAGCTTTTATCCTAATGCATTTGTAGAAGAAATTGTTGCCAGACTATTATCAAAGGTCTTCAATCCAAAGTATAACATGGAGTGTGATTTGGATAAAATGACCTCAAAAATAGTAAACTCAATAAACAACCATTTTAAAAAGGCTAAAATCTGCATTCTTCGTGATGACCAAGAGCAGCCATTCCCCACTGTAGATTCAGACACCATGGATGAACTTGTCAATTTAGTTTATAAGAATGTTCTGAAACAGTATGGGCTGGCTGTTGATAGTAAAGAACTCAAAGACAGTGATATTTTTGCAGAAAATATCACCAATTTAATTGTAGCAGCTATATCTGATTATCTTTTTCATCCACTGTTTTCTGGAGATTTGTCAGCTTCTTCCTATACTATTTTGACAGCAGAGAACATAAATCAGAACATCTTTAGAGGCATCACTAAACCTACCCAGCCAAGCCAGCATTTATCTCCATATAACACTTTGCTGCCATACACATTTTTAGAAGAAATAATCAGAAAACTATTATCTAGAATCTTTCCTTCTGCATCTAACATGGTTCCATACAGCAAAACTCCAAAAGATAGATCAGAAATTAATCACAGTGAAATCTCTTCAAAGTTAATCAGTGATATTAGAATGAAAATTTCTCAACATGAGATTCGATTTTCAAAAGATGAAGATGAAACTGAATCTCTTTATTCAGAGGATGATGTTCAGTGTCTCGTTGATTCCACACTCAGAAATATCGGGCAAAACTCTGGGTCTCAAGAAGCAGCTGAGCATGATATCATAAGCAGTGACAATGTTTTTATTGATAGAATAGCAAGTTTTATCATTAAAAATATTTGCCAACAACATCTTCATCCATTTTTGTATGGAAAGTTGTCATTTACTTCATCGTATAGATACTTTGATAGTACAAAAAGAAGACATTCTTTTTTTGCCAGTGTTTACTCCTCAGCCTTTTTGGAAGATGTGATTTCTGGAGTTTTAAGTAAAATATTCCACAGAGCATTAGGTATTGTACAAACAAAATCACTAAGAGATTCAGAAAAAGAACTGTTGGAAACAGCCGAAAAATTCATATATTTGATAACGAAAGAATTCTCAAAAGTTCAAGTTAGTACCCTAGAAAATGCTGAGGAACAATTGTGTTTGCCACCAGTAGATAGAGACACAGTGATAAAAATTATCAATGCAGCATATAGCAAAGTTTTACAGGAATATGAACTGGAACCTAATAAGGACTTTTTCAGTGACACCAAGACACTGGCTGAGAGGCTTACTAAAATTATCCTGGCTGAAGTTTTTGATTTCCAAATTCCTCCATATTTCATAGCAAAGCTACCTTTCAAATCATATTCAAAACTCAATGCTGATGTTTTGATAAAGAGAGTTCATTACGCAATCAATACATCAAGCCTCCGAAGACAGACTTGTACAACATATACCACCATATTGTCACACACACATTTGGAAAAAATAGTATCTCAGGTTTTATCTCAGATAAGTCTATTGAACTGCAGTGCAGAAGACCCATACTTTTTGCAGTCAGACTTCAACAACATAGTTGTGAGACTGATTGATGAAATCATGTCAATAATTTCTAAACATGCAATATGCATCGTTAAAGATGGAAGTGAAAAACAAAATGTAATTTCAGAAAACAGTATCCAGGCTATGGTTGATGCCATTTATACTGACATTTCTCATTTAAAGCTATACCAGTCTATTTCAAAAGATAAAAAAGGCATAAGTAATATACCTGTAACAAAAATAGCAAGTTATATAATAAGGGAAATATTTAACCATCATCTTGAGTCATTTTTACCTGGAGATAAAACTCTTCCTTGTACAATGGAGCAAATTTATCAGCAGAGAGCAATAAATCCTAAACAAAGAGAATTATCCTTCATTGTGAATTCAGCTGTCTTTTTGGAGGAAGTAATTTCTGAGCTTTTATGCAAAATTCTTTGTATATTCTCATATGTCTTGGCTACTGAAAATCCATGTAAAGCAAAAGCCAATGTTACAGATATTGTTACAAGATTAGTAAAATCAATTGTGCTGGAATTCACCACTTCACAAATTTTAGTTGCAGATCACTTGCATGAAAATCTCTATTTTTCAGAAGGATACAAAGAAATGGTTAAAAAAACTGTTAGTATTATTTATGAAAAAATATTAGATGATTATCAATCTCTGTTTCATATTTATAGAGCTATACAAAATGATGCTGTTGGGTTTGGGGAAAAAATATATCATCTTCTGTTAGAAGAAATTTATGATTATCAGGTGGAGTCATTAGTTTTAGGAAAATTAGAAACTTCTTCCTATTCCTCCCTCCAAGAGAAGAATATCATCAGAAATGTACTCAGCACCATCAACAATGATAGCCATGACTTGCCATCATGCATTACTGTATTGCCTCGTTCCCTTTTAGAAAATATGATTTACAAGATTCTGGCACGTATGTTTCCTTCACCTGAGACTGAAATAGAACCAAACGAGGAAGGGGTGCCACCAGATTATGCGTTTGTGAATACAGCTTCAAAACTAACTGATGATATTATAACAGAAATTTCTGAACATGAGATTAGACTTGCTGAGGCAGAGGAACATGTGGAAAATTTGCAATTAGGGGCAACTGATGACTTTGTTGACTCTGTATGTAACAATATTATTAAAAAAATTAAGTTTGAAGATGAAGTGCAGAAAGATGCATACAAAAGAGGAGGCTCATTCCTTGGGAGAATAGCTGGTTTCATTATGAAGGAAATTGTGGACCACCATCTGCAACCATTTCTATGTGATGAAAAATCATTTCCCAGTGACTTACCCAGAAATGATGATGTCATTGAACTCTTGAATCCCATTAAAGAAAAAATACAGTCCTTCCCCCAGACTTCTGTATACTCTGCTATGTTTTTGGAGGATGTCGTCTTTGACCTTGTTCGCAAATTTTATACTCTACCAAAAACTGCTGAAAGTCCTAAGGACAAAGAGATATCGGAAAGAAGTATCATGGGCCTGGCTATTAAATTTGCAAATGTTCTGATAGGGGAATTTAGGAAAAGCAAAATTAAAGTTCTAACAAGTGCTGAAAAAATGTTTGCATTTCCACCAGTAAATAAAGAAACAGTTGATAAAGTATGTGATTCTGTGTATGATGAGGTGACAGAAATATATGGATCTAAAAATGTTCAGAAACATGATAGAAGTAACATTGTTATAGAGATGGTTGCTGCTTTAACTAAGAAGGCAATCTCTGCTTTCAAGATTCAGCCACTTTTTTCAGGAGGCCAGTCTTCCACCTTGTTTTCATATCTAGATGTGGATAGCATCATGCAAAGAATTCAACACCTACCATATAAAACCTTTACAAAGATAAACAGAAGCTTGAAGGAGAACCCAGTTTCTTCACTAGAACAGTTACCTACACTTATTCCCCTAAGCTCAGACCTGAAAAACAAAATGGACACTTTGGAAATAGATAGCAGAGCAGTTAATGGAAAAGAGAACTTCAAAAAGAAGACATCAATGAAAACAGGCAGCATCCAGCAGCCAATATGTATTAATATAAGTAGTATTATGAAGAGCAAAGTAACTACCATAGCATTAGAGTCAGTTGGAGGTATGGCAAAGAAAAAGAAAGGGGATGAAAAGAAAAAGGAAACTTCAATTGGAAAAGATGAGAACATATCAAAACTTACTTCAACGACAACCAGTGTGAAAAGTAAAGATACTCCGGGGCCAGATTTGGGTACAGCATTTACAAAGAATGAAATCAAGAAGAAAGACCGCGTGTCTAGAAGAGATGAGAAAGGGCGAGGTGATGAGCTATATCAACATCTTTCACCAGCTATGAATGATACAAAAAACAAAGTTATCCTGGAACCGAGTTTTGAAATATGTTGTAAAAAGAAGAGTGACAAGAAAAAAGGAAGTTCGTTAGGAAAAGGGGATATACCTCTTGAATTACCATCTCTGACATCCAAAGTGAGAACTACAGAGATCCAAGAAAAGAGGAGGGATTCTCCAGCTTACCCAGCTACAAATGACAAACAGATCTTACATTCTAAACATGCCCAAAATGTCCCTGTAAGCATTTACAGAAATGTTTTAGAAACATCATCTCTCCAAGGACCAGTGGATGATTTAAATTACCCAAGCCTCCTAGGTGAAAACGCAGCATATGTAACTCAAGCTTGTGGCAAGGATTTTGCCCAGCATGCCTCAGTGAATTCAGCTAAACAAAATGCTCCTGCAAAAGAGGAAGAGAATGAGATCCAAAGGCAACCTCATAAATGGGACAATCCTCAGAACCTACTAGAAAATAAACCCAGGATTTTCCCTGCTAACTTTTTAGAAGATGTTATCTTTGAAATAGTTAACAAATTGATTTTTTCTTCTTCACTGGATACATATGCTGCATGTCAAAATGTAACCAATGATGTAAATCCAGCTGAGCTCTATGGTATGGCTATGAAACTGATTGATTCCCTGTTAAAGGAGTTTTCAGATGCTCAAATTAAAGTATTAAACCCAGATCAAGGAATTAAGTTCCTTCCATCTGAGGATAACGTTTCAGCAGTTCATAAAGCACCTCTCAGGCAAAAAGAATTGTCTGTGGTTAAAAGACCTTCCAAGAAAAAGATAACTATGGATAATATACCACCCATACATAACACGGTACCTGCAACTAAATTACCTTCTTCAGGTCAGACACCTTTTACGGCTAAAATACCATCAATTGATAAAATGTTGGTCAATAAGATTGTTCACTCCTCTATATGCAATATCTTACAGGATTATAGATCTCAGGACTCTATCTGTGAGGACATAAATTTTAATGTTGAAAAATTAGCAAAAAGGCTAGCTAATGCAGTAATAGAAGAAATTCTTCAGTATCAGCTAAACTTGCTATTTTATGATGAGGGTCCAGATCCAGAATGTTTGCCTCTAGAATCTAAGAAGGTTATGAAAAAGGTCCATAAAGTGGCCCAGAGAGCCTGCAAAGAATGTCAGACATCATCACCGTATACCATAATGCTGCCTTATGAATTTTTAGAAAGGATAATTTCTTCTCTCCTATCGAGAATTTTCTCAACAGTAGCCAATGCTAAAACAGAAATGTCTGAGGATAATTTGTACACAGAGTTAGATTTCCTTCAAATGAAGTTAGCAAGTACAGTTAAAACAGAGATCTCCAAAGATGAAGATATGATTATACAGTATGTAAAATCCTTACATCCTAATGATGATGAAATTATTCAGTTAGTGGTTCAAACTGTTTATAATAATCTCTTGCCTCAATTTGGATCTCAAGAGAGCATACGAAAGTGTATTAGCAGTGGTTGCAAAATCCTTTCAGAAGCCATAGTCAATTTAGTTGTACAGGAAGTGACTGGAAATCAGTTACAAAACTATTTTTCTGGAGAACTAACACCACTTCAGTGTACAGAAATTGATAGTACTATTGAAAATATCCTTAGAGGTGTTACCCAAACCAGTGAAGTTCCCCAGCCTCAACCATCCCGGGCTTACAAACTGCCTTTTAACATAATAGAAGAAATTGCTGTAAAGTTTTTGTCAAAGCTTCTATCTATGTTTCCAAAAGCAGATAAAGAACAAAACAATTTTCTGAACGCTGAAATGCAAAAAATAAGCTCAAAAATCTTGAGTTCATTTCAACAATATATCTCTCAAAGTCATATTACAGTAGTGCCACAGGTCAAAGAGTCCTCCACTGTGTCTTTAACAGACAGTGCAACTATTGAAAAAGTAGTCACTTCTGTTTATAGCACTGTTCTAAAGCACTCGGGCTCCCATATTTCGGTGTACAAAGATTTAATGGGGAAGAGCAATGTCCTTTCTGACATAATAGGATTTTTAATGGTGAAGGAAATTTCCAATTCAGAATTTCATCCTCAAGAACAGGAAGAAACATCAATTCAGAGTTAGTTCTAGAAGCCGTCAAAATTATGGAAAAGGTGGCTAAGATTATTGATGATCTGAAGTCAAAGAAAAAGTCTCCAACCAAAAAAGAGGCTGTATTAGATGCCAGGTTTTTAGAGGAAACACTTGCCTTGTTCTTGGCTAAACTAGTCAAGTTGCCAAGTGCCTCAAGCAAAGATGCTGAAAACTTATCAAAGCCTGAGTTAAATAAAATTGCATCCCAATTGACAAAATCCGTGACAGCTGAAATTTCCAGGAAAAACATTAGTATTGTAGCTACCAATCCTGAAGAATACTTTTTAAATCCAGAAAGCATAGAAATTATTTCTCAGATGGTTGATTCTGTTTATAATTGTGTACTACAACAATCTGGAACACATGAAGAACTTTATCATGATATGAAAGATACAAACTGCATCTTTCCTCAAGAAATGGCTTCTTTAATTATCAGGAAAGTTTCCAGTTGTCCATTAGCAATGATTAGCTCAGGAGATCCATGTGCTAATCTCTTTGGTGATTTGGACATTGATCGAATTGTTGAAAAGGTGCATGAGCACACTATCAAAATAGAACCTGGACTAGAGCAAAAAGGGTTAGATCAAGGTTTAAGGCAAGAGGAGCTTTCGGTTAGGATAATTCCTCACCTCGGCAAAGAACCAATTAATATTGATCCCGACATTGTTGCAGAGCACTTAGGGGTGATTTCTATAAAAACACAGTCTCTTGAGAAGCTGCAGACCGAGTGTTTAGCTAGAACTGGACACAGCATTGAAACATTGAGAAGAGCATCAATAAATGGGAAGAGTTACTCAACTGAGATACCTGCTGCGGGAAACAGAAAGAAAGAAAAACGCATTTATTTGGATCAGATGGGACGACTGAACGTAAAGCCTTTAGAGACTTCTAGTAGAAATTCATTTCAGAGTTTAATAAAGCCCGACATCACCAAAGTGGAGCTTTTAAAAGATGTCCAAAGCAAAAAAGATCTTATCATTCGGTTAATAACTCATGATATTAGTCAAGAAAATTTAGAAAATAAAGAAGAAAGCTTAGCTTCTGATGAAGATGAAGTTGTTTTACAAGAGGTTGTTAAAGAAGAAGAATTTCCAGAAAGCCCACTTGAAGATCAAGTAAAAGAAGACATGAAGCTCACTACCAGCACAGTGGCTCACCCTAAGCCACTGATGAGCAATCACAGTCTGAAAAAATTTTTGTCAGTAGGAAAATGTCAGCCCAAATCCAGTGTAACTATAATGACTGAAGTGTCACCAGCAAAACAGACGGAATCTGAACAGACACTAATAAGAACTGATTCTAACATTGATGTAACTACCTCAGAATGCTTGACTGTCACAAACTCGTCTTGGGAGAAAAAGACACAACTGAGCGAAACAGAAATGAGACCTAACACCGAACCAACACATCACTTCATCCATAGAATGATGAGTGCATCTTCATATAATGAAGATCTGGCTTCGTCTTCTAGACAGAGGTCTGAAATGATGAGGAAGAAGATATCATCAACTTTCTCCAAAGTGTTTTCAAGATCTAACACCAGTGTTCCGAAACCTTTCTCACCCTCACCCCCTCACCAAGAGAGAAAGTGAGACTGTAATACCCAATAACAATAAGCATGTTGACCTTCCTCAAAAAATAAATGGTTGTTAAAGCTGACATTGTGTCCTACACACTGATTCTTATAAATATTGAAAATAAGAGCAAAGAAAACATAAAAAGGCAGTTGGAGAAAAGGAGGGTTTTGATAAATGCTTCTGACAAGCATTTTGGGATGCAAAGAGCAGCTCTGTGTCACATATAGATCCATCTAGCAGGCAGTGCAGGGTTGAAGCTCTGCTCTTGAGGGCCCTGCAGCCTTGCTGGGAAGATGAGAACTAACTTCAAAGCAAACGTGTGATACCAACAAAACAACGTGTCATCACATCTTTCAGGCAGCCTGGGTGTTCAAAGAAGGGAGTCATCGCTGTGGGCTGGAGTGGTCAGGATACATTTGCTGGAGGAAGTGGAATTCAGACAATCCTCAAAGGACCATTAGGATTAGGGAGGCCTTGACGGCACCAGGAAGGCCATCCCCTCAGGTCACACACCTGCATACACTGCTGCCATGCCTGAACAATTTAGCTCTGGCCCATAGGACATTCTACGGTAATGGAAATGGTCTGTATCTGCTCAGTTTGGTACAGGAGGTGCCAGCCCCACGTGGCTATTGTCACTAGCATGACTGAGGAACCCAGTCTTTCCATTTTATTTCAGTTTAAATAGCCACATGTAGC EMBV3_34665 ATGGGCATGAGGTGGCTAAGGATGCAGTATCTGCACGGCTGCTGGAAGCAATGAGTGAGT Gene GeneID:525516|DND1:XM_002689221:65_cdna Constitutive 0 NULL GeneID:525516 7 GENE DND1 NULL dead end homolog 1 (zebrafish) EMBV3_09229 TAGCCTGTAGGAATTTGGTCGCTTTGAACCGCAAAGCAGCCGTGTTTCCATCTAGCGCAA Gene BVT0102_238786 - 0 NULL GK000017.2:45456134-45465975 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33060 CTCCTGTTCTGCCAAGACTTCTTCCTTTTTTGTTTGCATTTAATGGACACAGTCTTAGAA Gene GeneID:541130|UBE2N:NM_001076258:40_cdna Constitutive 1 NULL GeneID:541130 5 GENE UBE2N MGC139855 ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast) EMBV3_06985 CCATAGCTGCTTCCCTGGTTGGTTTCTACCTGTTCCAGAGCTTAGATTGAAATCCCAGGG Gene BVT0101_037921 + 0 NULL GK000007.2:20918559-20923761 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11771 TGCAATGGTGTCCTAGAGCCCCTCTACCTGTGCCCCTGAACACCGACTCCACTTGGCTGC Variant GeneID:509684|SLC25A39:NM_001075415:230_cdna 355^979 2 EMBV3_17610 GeneID:509684 19 GENE SLC25A39 MGC140025 solute carrier family 25, member 39 EMBV3_28705 AAAGAGAAATCCAGGGACTTCAGAAACCACGTGATCCAGTACCTCGAGACACTCCTGCAC Gene GeneID:512029|SNX1:NM_001046107:46_cdna Constitutive 1 NULL GeneID:512029 10 GENE SNX1 MGC137095 sorting nexin 1 EMBV3_08329 AATTGACCAGAACCGGGATGGCATTATTGACAAGGAAGACCTGCGGGACACTTTTGCAGC Gene GeneID:514106|MYLPF:NM_001075647:326_cdna Constitutive 0 NULL GeneID:514106 25 GENE MYLPF MGC143425 myosin light chain, phosphorylatable, fast skeletal muscle EMBV3_15649 GGTGCTTCCAGCGCAGACCAGCTGATGGAGAACATTGGAGCAATACAGGTCCTTCCAAAA Gene GeneID:541597|KCNAB2:NM_001014383:186_cdna Constitutive 0 NULL GeneID:541597 16 GENE KCNAB2 NULL potassium voltage-gated channel, shaker-related subfamily, beta member 2 EMBV3_20536 TGAAGAATGGGGTACTTCTGGGTTCCAGGAGAATTCTTGCAACCGAAACCAATATGGGAG Gene GeneID:530930|RHOBTB3:XM_002689396:23_cdna Constitutive 0 NULL GeneID:530930 7 GENE RHOBTB3 NULL Rho-related BTB domain containing 3 EMBV3_30291 AACTGGAAGCAAAGTGCAAGGAGCGAGGAGGTCCAAGTGGGCGATGCACTGACTGCTTGC Gene BVV0101_027137 - 0 NULL GK000023.2:50331746-50354842 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37796 AAGCCACAGAATATCTTCAGCCAAATCCAGGCAGTGCATTGATAGAAGTTGGTGAATCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15891 ACTTGGGTGATAAGTGGAATTATGAGTACCCTTGGAAGGATCTTAGCACAAACAGGACTG Gene GeneID:539571|ESM1:NM_001098101:1_cdna UTR3_Alt 2 NULL GeneID:539571 20 GENE ESM1 NULL endothelial cell-specific molecule 1 EMBV3_02239 TCTGGATATTCCTGAGCCACCGCCCAATTCTGGGTATGAATCTCAGCTCCGTTTGCGCCT Gene GeneID:541134|UBTD2:NM_001015679:157_cdna Constitutive 0 NULL GeneID:541134 20 GENE UBTD2 DC-UbP ubiquitin domain containing 2 EMBV3_42082 CCAGCAGATACTCTAGCAGACCTTAAACATTTCATTTGAGTAAACTGAACTAAATCCAAG Gene GeneID:404180|MEST:NM_001083368:149_cdna Constitutive 0 NULL GeneID:404180 4 GENE MEST PEG1 mesoderm specific transcript homolog (mouse) EMBV3_20048 TGGTACGGGATAGAGCTTGAGAAACCCCATGGCAAGAATGATGGTTCAGTTGGAGGTGTG Gene GeneID:515213|CLIP4:NM_001102020:132_cdna Constitutive 0 NULL GeneID:515213 11 GENE CLIP4 MGC165714 CAP-GLY domain containing linker protein family, member 4 EMBV3_29685 GATTAACTGGTTCAACCTTAAATGCCTGCATGGTGCCTTCTTAGGGTAAGGTGTAACCAC Gene GeneID:513479|RNF114:NM_001024531:1027_cdna Constitutive 3 NULL GeneID:513479 13 GENE RNF114 Znf313 ring finger protein 114 EMBV3_38194 CAACTTGGAATCGTGTTGCAGGAGCCCGTCCTGTTTGACTGCAGCATTGCCGACAACATT Gene GeneID:100336913|LOC100336913:XM_002686717:68_cdna Constitutive 0 NULL GeneID:100336913 4 GENE LOC100336913 NULL ATP-binding cassette, subfamily B, member 4-like EMBV3_09945 AAGTATAAAGCGCTGTGGACAACAAGCAGGACGACTTCCATCTGGAGGGGGCGTCTCGCA Gene BVT0102_371949 + 0 NULL GK000023.2:49977846-50077252 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17060 GAGTTACAGGAGACCACCAGGACCTCCCAGTTGCCCAAAATGTGATCAGAATGGAATACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38065 AGACATATACGACTCTTCATTCAATTGACTCTGGGCTCCTTCCATGGGCTACTGGTGGCC Gene GeneID:511942|GLP2R:XM_002695844:285_cdna Constitutive 0 NULL GeneID:511942 19 GENE GLP2R NULL glucagon-like peptide 2 receptor EMBV3_10746 ACACTGATATTTGGAATCTTTTAACATAGGGGTCAGCAAACTGTGGTCTGTGGGCTGGCC Gene GeneID:506430|VTA1:NM_001038045:2_cdna UTR3_Alt 2 NULL GeneID:506430 9 GENE VTA1 MGC133887 Vps20-associated 1 homolog (S. cerevisiae) EMBV3_16673 ACAACAGATTTCATTCTTATCACAGGGCTACACTGTCACCACAGGCTCAGGGCAAGAGGG Gene BVT0102_069148 + 0 NULL GK000010.2:36044689-36068633 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013431 TCONS_00013430 1 XLOC_008123 Coding TCONS_00013430 XLOC_008123 Coding Coding - 10:36057829-36060803 - TSS9975 2443 1 TCONS_00013430_1 101 2 0.178943827783384 0.00486490565066469 0.00517827982204681 0.00716911402248601 0.00540788932584796 0.00549351097926171 0.0027979405359875 0.00281732429384664 0.00361414447610391 0.00381717877860014 0.00089940129301168 0.000137622287762864 0.000206251919844075 0.000606107048925548 0.0027379750622913 0.0013056045273458 0.000437258882084045 6.97387678674059e-20 0.000456633302849918 0.00921464529093484 0.00648964889240645 0.00161216424356539 0.000206828169113503 0.00022031485322055 0.000252627994972879 0.00769889910290899 0.00659643120717614 0.00401428235479831 0.000153094357832586 3.47035354647121e-05 7.75622530434564e-05 XM_005211625.1 LOC101905957 PREDICTED: Bos taurus proline-rich protein 24-like (LOC101905957), 0.0 978 100.00 0.221449038067949 NR_030716.1 5430417L22Rik Mus musculus RIKEN cDNA 5430417L22 gene (5430417L22Rik), non-coding 0.0 1108 74.11 0.733115022513303 TCONS_00013430_1 sp|C9JVW0|PRR24_HUMAN PRR24_HUMAN Proline-rich protein 24; 1e-09 53.1 56.10 0.396039603960396 1 coding 0 0 0 0 -0.0825861190469074 0.554518335538019 -0.0117257300620825 0.842165762137519 TGTGGCAGCAGCGAGGAAGCAACTGACGGGCCGGCGGCGGCGGCGGCGCTGGCGGCGGTGACTGGTCCAGGCCCCGGCGGCGGCTGCAGCGACGCAGTGGCGGGCTGCGGGCTGGCGGCGTGAGGAGCGGCTGCGGAGAGCCGAGCGGCCGGGAACCGAGGGCGCCGGGCCGCCCCTTGCCCAGTCCTTGCAGGCCGCCAGGCCCCCTCCAACCGGGGCCGTGGAGCACCGGGGCAAAGGCCGGGGCCCCCCCATGAAGGAGCGCGACGCGACCCCGGCCGAGCGGGGCAAGCCGGCCACCTACACCGGGGACAAGAAGGCGAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCCGGCTCGCCACCGTGTTCGCCTACGTGCTCTCCGTGTCGCTGGCCGCCATCGTGCTCGCCGTCTACTACAGCCTCATCTGGCAGCCGGTGGGCGCCGGGACCTCGGGGGGAGCCGCCGGCCCGCCCCCCGGCGGCTCCAACGCCACCGGCCCGTCTGGGACTTCGGGGGCGGCGGCGGGGCCCAACAAAAGGAGGGAGCTGTAGGGGCTCTTCTTTAATAAGCCGAAGCTCTTGCAAGGAGGCAGGCACGGAAAGTAGTGGAGCTCAGGTACGTCAACCTAGTTGCAGTGGCCACAGATGCATTTAATTTATAGATCCCTGTATATAGTTGTTGACATATGCACTAGAAGCTATAATTACATAGAACTACATGTATCCTCCCACACCCTGGGTAGCTACTGACTGATGGGGTTAAGCAAGGGCTATTTGCTGGCCCCCAAAGTGCAGCTAGCCAGAAGGGCATAAACACTTTTTCATTACCCACTTTTTTACCTTTTCCCCCTCCTATTTCAGAAAGAGGTTTATGATACAAAAGAGTATAATCGTTCTCAAACCTGTTGAAAGGACAATGGAAAACCTTTGAAGAAGTAGAAGCAGTTTGGGGAGGGTGAGGAATGTACCCATCCCCTCCTCTTCCCACCCTAGTGCCCCCACCTAAGAGGCTTTCTATTCCAGCCCTAAGTATCTGGATACCCGCCAGGGAAGAAAGGAAGGGAAAGAGCAATGTCTCTGTGCTTCAACCCTTGGCCTTCTCACAGAGGTTAGGAAGAGCAAGCTTTTGTAAGTAGAATGGATCACAAATGTTTTATCTTTTTTTTTTTCCCTGTTCTTCAAGGTTAGGTCTTGTTCTGTAATCACCTTCACCTTCCCTCTTGCCCTGAGCCTGTGGTGACAGTGTAGCCCTGTGATAAGAATGAAATCTGTTGTAAATCCAGAGCTTTGAGCACATCCTCTGGTTTTGAGTTGTACTATGGAACTCGAAGGGCTGAAAGATGGGCTTCAAGCTCAGGATTGTGTTTTGATAGCCAGATAATAGACCACCCATGGAAAGTTAAACTGGCTAGTCTTTACCTCTCCTGATAAGCCCTACTTACACACAGCCTATACTTTCATTGAGATGAGAAGCAGTAGGTGAAATGACAGATTTGTAAAGCTAGCTCTGGGGCCACAAGAATTCTACATCCTCAATTTGGATTCCATTTCCTTCAGCCACTTGCTTTTAGGCAATTGAGTGTGGGTAGTGACAAGATATCAAACCCCTTCATGTTTCCTTTTTGGGAAATGAGGCACTTTAAAACAACGACAACAACTTATCCACCTGAGTCCTGAAACAATTTGTCTCTCCAGTTTTCTGGCCTATACTCCAGTTAGCTCTGATCCAGGTTTACAGGACCACAGCCTCGATTTCAGCCATGTCCTGCTGTGGGCAAGATAAAAGCAGCTGAGCTGTCATTGCCTAGGGGCAGGCTGGTAGCACCCCCAAGGTGTCTTGGCTGAAGGAGATTTCCGAGCACTTGACTTTGGTCATCAGGAAGCCTTTGAGACCTTTTTAAATTTTTGGTGAGGGCCTGGAGGAAGAAACATAGAATGCCACTTTATAACTTCAATAATAACCTGTAATTTATATTTATTGTGTGAATTTTTAGTCCTATATTTTAATAATTTGTAAATCGATCTCTTATTCCAAGAATCCTTTGAACTGGCAGGAGAACATCTGGGAGTCCAGTCCCCTGTCCCCATTCTGACCCCTGCATTCTGGACTGTTGAATCCACTTTGGGATGGATCGGCGTCTAGAGAGACCACTTGTGGGTTCAGCTGTTGGCCTCCAGACTCTTAACACCTTCACTGGAATTGGGACATCAGCTCCAGCCCCAGCTGTGAGCGTGACCAGAGACATTATTTATAATTCAGCCATTTAAGATATACCTGTACTCAAAAAGTCCTGTATATTTTTTAAAAGTTTTATTTTTCAGGTGAACAAAAATACATTCTAAGAACTCTACGTCAGCCCGTGTAAGTTGATCGTTTCTCTTTTCATACTTCTTGGGGAAGGAGTTAGAGGTTGAAAGAGGCAGTGGTCTAAGGTG TCONS_00016782 r 3' 7284 TCONS_00016782 r 3' 10257 EMBV3_29646 TGAAGACACTCGCGTATCGAGGCTTTATCTTCAAGCAGACGTCAAAGCCGTTCTGACTGG Gene GeneID:540516|ERI3:NM_001046479:275_cdna Constitutive 5 NULL GeneID:540516 3 GENE ERI3 MGC134375 PRNPIP ERI1 exoribonuclease family member 3 EMBV3_11313 CCAGACTCCCTGTGATCTAGGCTAATGGGTGTTAGTGACGTGGAAGATTCAGAAGGAAGC Gene BVT0102_238558 - 1 EMBV3_41283 GK000015.2:30811462-31213141 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058796 TCONS_00058797 1 XLOC_036200 NonCoding TCONS_00058796 XLOC_036200 NonCoding NonCoding - 15:30812618-30820457 - TSS44217 2072 2 TCONS_00058796_3 77 0.211872586872587 3 0.736029599387599 0.000479349839426764 0.000408943963787748 2.19865947633306e-09 1.27850183913091e-05 7.25966262735196e-13 1.50757034186082e-08 0.000147507667942245 4.23729777255044e-13 6.20111633343055e-07 0 0 0 2.04675654664372e-05 0.000124864018313429 3.88412889602316e-10 0.000152961489960126 0 1.2107989622447e-05 0.000643315968744512 0.000495365995559732 0.000526540074352717 0 7.08415608038755e-05 2.4272337892805e-05 0.000133106799028363 0.000292520424090332 3.60607901729016e-05 0 0 0 XM_005228472.1 MID1 PREDICTED: Bos taurus midline 1 (Opitz/BBB syndrome) (MID1), 3e-24 118 88.89 0.042953667953668 0 noncoding 0 0 0 0 -0.0442035210227358 0.771196919176283 -0.0159675982513008 0.779853222069027 AACAAAGGCCCGGGGAAGGCTAGGGCGATTTCCCTAGGGGCACAAGCAGAAAAGTGGCAGGCCTCGGAGTCGAACTCAGTAACCAGAGCTCTCACGCCTCTGCATCATGTGAACACTCTACGGGGAGGCAGCTATGCGGGGACCTCCCGGGAGTCGGTGGTGGGCGCATTCGCGGGACTCTGCCTCTGAATACTTGATTCACTCACCGTTGGACTGTCAGCTCCTCCAGGACAGGACCACGTTATAGGAGCTGGACCCCGTACGTTAAAGGGGCAATTCCAGATGGACCAATGCCCACTAGTTTCCTGCTTGTTTTCTTCCATCTCTCCATTCTTGGAGATCCCTGCAGAGCCTGTCTATTGCCACGGCCGCCATTGCTCTAGAAGACGACAGATCAGCTGAAAGCAGCTGCCCCCGGATTCCATGATCTACTGAGTCAAAGTGGTACCTCGATGGCTAACAGGCTGCTATCCTCTCGGGCCATGGTTTCCCAAAGATCTCCGTGGCTCTGGGGCTGGAGCTCTGAGTGATGACTGAAAGGCCCCAGTTCCCTCTTGAACCACCCAATTCTCTAGAAAGATGGAACTCCCGAAGGCAAATCCAAGTGCTCCTCTGAATCAGCACATCCAAAATCCTAAGGAATTCTGGATGTGACAGCAGGATCATTCCTGATTTGGGGTGGGAATACTTCAAACTCAATTGTGGTGCTGAGAAGAGAGCTTCGGTGAGGATCTGCATGGACCAAGAGACGGGAAGAGGATGGGTGAACTCCAGCCTGGAGCGTTCCTGATACAGAAAGACATGAGAGGGAAAAAGACTTACGGAAAGGAAGAAGGCACTCAACCTCCCACCCACAGTCTTTTCCCATTCGACAGTGCCTTTAGATCTGAAAAAAGAAAGTCTCAGTTGCTCAGTCATGTCCAACTTTTTGCGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTTCATAGTATTCTCTAGGCCCCTTTAGATCTGGGGTCAGGATAATTATCAGGAGGGACTACTCATTGAGAGGAACCTGTTTTTTTTTTTTTTTTTTTTGAGAGCCATATGGAAGCCAAGAAATGGAACAGAGGGAGGAGCAGAGTTCCTGGGTCAGCCCAAGCCCTGCAGAGAAAGTGCATGGTGGACACTCGCCCTGGGAGTGGATGTGAGTCTGAGTGTTCTTCTCAAGGGTGCTGATCTTTTCAGGATCAGATGAACGCTGTGTCCTTCTGCCCTGCAAACAGCACACGTGCACAAAGACGGTGTTTACATGGCAACCTGCAGAAGCCCAGCTGGGGCCCTGAGCTAGCAAGCCCTGCTGAGAAAGGGGTTTTTCAGGAAGGAGGCAGCCCTGAGCCCAGACTCCCTGTGATCTAGGCTAATGGGTGTTAGTGACGTGGAAGATTCAGAAGGAAGCAAATCTAAACACGAGTTCTGTAATGTGAAGTGAAGAAAGGAACAAACATGATGATTGCACTTTTCAGTTCTGTAAAAAATCCACACCGAGAGAGAGAAAAATGCAAAGGCAATATGGAGAAATGAAAACTTTTTTAGTGAAGTTTTTTTTATTCTAAAAATTTGCTTTAATATCATTATGAAGTTATTTTAATAATAGATTTAATTTTTTCTATGTTACATAAAGTGCTTTTCCTCCAGAAATAAGCCTCTCTCTCAATTGTATTTGATTTAGGTTAATATTAATGCCCTGCACTCCTTGAGCACCTGCTTCTGAGAAGAGGTGCTCCAGGACAGTGCCAAGTGGCTTGGAGGGGACATCCAAAGGGCAGGCCATTGAATTCTAAGGACCCTCAGGAGGCAGTCAGGGAACAGTCACGTGATTTGGAGTCAGGAGCCCTAGGTTTACATCCTAGACAAGAAGCGTGACCAGCTGTCGTGTTCTGCCTACGTACGACTGAGGGGGTCCCCAGGACACTGTCAGTGCTAAAACTAGGAGAGATCTGGGCAAACCAGAGTGAGCTGGTCCCCTGTGAATGAGGCACTTTAATCTCTCTGTGCTCAGTTTCGTCGTGTGTAAAAGGATGCTGATGACTGCCAAGACCTTTG TCONS_00060987 TCONS_00060988 r 5' 1158 TCONS_00060987 TCONS_00060988 r 5' 1158 EMBV3_17644 ACAGGACCGAGATTAAGTGTCAAACCAAGGAAATTCTCAGGATAGCGTGTACCTCCAGTA Variant GeneID:514158|ZDHHC6:NM_001046167:39_cdna 175^626 1 EMBV3_16502 GeneID:514158 26 GENE ZDHHC6 MGC137792 zinc finger, DHHC-type containing 6 EMBV3_31301 TTATGATTGGTTGCCTCTTGCCCCATCAACTCCAGCTATTACTGTCGCATTAGTCCCGCC Gene BVV0102_070530 + 0 NULL GK000006.2:118331730-118335667 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018287 TCONS_00204309 TCONS_00204311 2 XLOC_009213 XLOC_124399 Coding TCONS_00204311 XLOC_124399 Coding Coding TADA2B 6:118330608-118334264 = TSS152867 3656 1 TCONS_00204311_1 335 0.0566192560175055 1 0 0.00525123979886293 0.00413505089598599 0.00524612432815733 0.00290223068839796 0.00347522737296056 0.00144132163274122 0.00201076581950839 0.00276514296958255 0.00388472396501219 0.00130251984340085 0.000218818513795841 0.000192347798611429 0.000915941257085016 0.00100192576825834 0.000860733747207573 0.00292339146810593 0.000142850073406438 0.00850186498219568 0.00272813379032797 0.00201979379748089 0.000213865845213631 0.00129357031383114 0.00146944886523124 0.00100673426834702 0.00367293410247396 0.0022016859718044 0.00174357579438621 0.000476066998137163 0.000222258591856349 0.000963532690507017 NM_001206410.1 TADA2B Bos taurus transcriptional adaptor 2B (TADA2B), mRNA. 0.0 6576 99.89 0.99972647702407 NM_152293.2 TADA2B Homo sapiens transcriptional adaptor 2B (TADA2B), mRNA. 0.0 1150 84.96 0.277899343544858 TCONS_00204311_1 sp|Q86TJ2|TAD2B_HUMAN TAD2B_HUMAN Transcriptional adapter 2-beta; 0.0 649 94.63 0.997014925373134 0 coding 0 0 0 0 0.0896488746047637 0.402735912427907 -0.00246089597861811 0.958974816445368 GAGGACATGGCGGCTCACGTGGGCGCTTCCCGGACTCCCCAGGAAGTAATGGAGCATTACGTAAGCATGTACATCCACGGCAACCTGGGGAAGGCCTGCATCCCCGACACCATCCCCAACCGGGTGACCGACCACACCTGCCCCAGTGGGGGCCCCCTCTCTCCCAGCCTCACCACCCCCTTGCCTCCCCTAGACATCTCGGTGGCCGAACAGCAGCAGCTGGGCTACATGCCGCTGCGGGACGACTACGAGATCGAGTATGACCAGGACGCCGAGACGCTCATCAGCGGGCTCTCGGTCAACTATGACGACGACGACGTGGAGATCGAGCTGAAGCGCGCACACGTGGACATGTACGTGCGCAAGCTCCGCGAGCGGCAGCGGCGTAAGAACATCGCGCGCGACTACAACCTGGTGCCCGCCTTCCTGGGCAAGGACAAGAAGGAGAAGGAGCGGGCGGCGCGGCGCAAGGTCACCAAGGAGGAGAAGGAGCTGCGGCTCAAGCTGCGGCCGCTCTACCAGTTCATGTCGTGCAAGGAGTTCGACGACCTGTTTGAGAACATGCACAAGGAGAAGATGCTGCGCGCCAAGATCCGTGAGCTGCAGCGCTACCGGCGCAACGGCATCACCAAGATGGAAGAGTCGGCCGAGTACGAGGCGGCCCGGCACAAGCGCGAGAAGCGCAAGGAGAACAAGGCGGCGGCGGCTGCGGCCGCGGCGGCGGGGGGCGCCAAGCGCGGCAAGGAGGACGGCCGGGACGGCGAGTTCGCGGCCATCGAGCACCTGCCGGGCTTCGAGCTCCTGTCGGACCGCGAGAAGGTGCTGTGCAGCTCGCTGAACCTGAGCCCCGCGCGCTACGTGACCGTAAAGACCATCATCATCAAGGACCACCTGCAGAAGCGCCAGGGCATCCCCTCCAAGAGCCGCCTGCCCAGCTACCTGGACAAAGTCCTCAAGAAGAGGATCCTGAACTTCCTCACTGAGAGCGGGTGGATATCCAGGGACGCCTCCTGAAGCCCGCCGCCCGGAGCGCCCGGAATGGACGGACGGACCGACGGACGGATGGCTGGATGGTTGCCGCGAGGGCCACACCGACAGTGAAGAGGGGAAAAAAAAAAAAAGCTTTGTGAGCCAAACGAAAGGGGGTGGGCGGGAGGGGGAGAGGAAACGCTTTCCGCCCCCACCCCCACTTCACCCCGCATTGTTGCTCTTTTTTTAAAACAAATCGAGTCCTTTTTTTAGGGTATCAATTCTTTTTATGGTCCTCTGAAGAAGCAATAGCAACAGTCGGATCAAAGGGAAGACAAAACCTGTGTATATTTTAACTGAATCCCTAAACGTAGTTCTTTAAGATGACGATTTGCCTTTAAGTGTTCAGTGTGGAGCATATGATGATGAGATCAGGAAATTTCCTTTTTTTGTTGCTTCCCAGTGGTACAGGACTGTTAGATGGGCAGAGAGGAGCCCTTCCCTGCCGGCTGCTGGCTCACCCCCGTGACCTGAGCTCCGCTGCGGCTGCGCTCGGCGTCGGGCATGTGGCACTTTAGGCGGAGGGCGCCGGGCCCGGCAGGAGAAGAGGCTGGGGAAGGGCGGGACGGGCATCTGTAGGGAATCGCCAGGAGGAATCTGGTGTTGAACGGGTTGGCCAAACAGCTTCCCCACGACGGCTGGCGGTGGCACTTTAAGAGAGCTCACCGCGGTGTCTGGAGGGGGATGCGGGGCCCAGCACAGACTGGCAGACCGCGGGGCCTCCTCCCCTGGGGGTGCTTCTTGCTGGGCTTAGAACTTGGCCTTGCATTTTACTTGGAAGAACTCATTTTAAATGAAGTTCACCGAGAGTTGAGAGTTCTGGGTTTTGGGTCAGCTCCTTCCAGGGTTCTCACCCCAGTGGTAAGCCCCTCTTTCTCTGAGACTGGCCACGTGTCTTGTCTTGTATGGTCTCAGGCCCTGGGCTAGGCAAAAGGGACCCCTGTGGCCTGGAGGCCCAGGCACTGCTTCTCTGGGAAGAAGTGGCTTAGAGTCTTGAGCCAGACTCTGGCGTGCCTCTGCCCAGCCTGGTTCAGAGAGGCTCTCAGGGGCGCCCTTTGGTGATGGGCACGGTGCCTTCACGCGGGAACCTGAGGAGTCGTGTGTCTTCCAGCTGCCTGGGGCTCTCGTGTCCAAGGCCCTGCTGTAGAGTCAGTGGAGTGGCCAGACCCCAGTGCTTCTCCTGTAGTCCTGGGGCGCATCCTGCCTCTCACCCCCTGTAGTTACCAGACTGTTTACCTCCCAGAACGCTTGGGCTTGAAGTTAAATTAAAGTGAAGGTATTTGAGAGAGGAAAAAAAAAAAAAAAAAAAACCTCATCATTTCCAAGGATGGCTTAATTATGGTGCCTTTTCCTTTCACATCCTCTGTCTGTCCCCTAGGGTGAATTTTCAGCATTAAATATACACGTCAAGTATATTGGGGGCTTCCCTGGTGACTCAGATGGTAAAGAACCCAGCTGCAATGCAGGAGACCTGGGTTCAATCCCTGGGTCGGGAAGATCTGGAGAAGGGAATGGCAACCCATTCCAGTACTCTTGCCTTGGAGAACCCCCACGGACAGAGGACCCTTGGCGGGCCACCATCCACGGAGTCACAGAGAGTCAGAGGCAACTAAGTGCCTGACACTCAAACACGCCGTCTGTGGCTTTAGTTGTAAACCGCATCACATGCTGGCAGAGCAGAACTCCCCGCGACCTGACCACAAGCCTGGGACAGGGACCGACCTCTCTGACCATAAAGCAGCGCACGGTGGTGTCACTCCCAAGCGCCGCCTCCCGCCGTCACCCGCAGGGTAACCGCGGCTGCCAAGAGCGCAGACACAGTCTGTGCCGAGCAGAGGCGGAGACGGTGCTACGCCCTGCCAGGGGTTCTCAGCCAGGGTTCCTGGAGCAGCAGCGCATTGTCCCCGGGGGGACCGGCTGGCCCTTCAGGGACATGGGCCCCTCCCCTCCCAGGCCTCGGACACGCGGGGCGGGGCCTCGCAGGGCACTGGGACAAGGGCTGAAGTCTGAGAACTGCGGGCTTTAGCTGCTCCAGTGTCACCGATTTTCTACATCAGATTCCTAGTTTGGTGAGGTTTTAAATTTAAGTCTTATTTTTATACAAAATGATTGCCAGACTTTCACTAAGCTTGAGAAGCAAAAGCTCCCTGTAAAATGTGCGTGGCCCCGGCCAAGAGCTGTCAGACGAGAAGTTCTGTGCTTAGGCAGGTTGTCAGTGTGTGTCTCTTCTCGATGGTATGAAGAATTTATTTAGGCTTGACTGTTTTTAAACACCATAATGAATGTATAATTTATGTTAAAAGTGTGAACCCTTTGTTACAAGGGAAAAGTAATTTTATGATTGGTTGCCTCTTGCCCCATCAACTCCAGTTATTACTGTCGCATTAGTCCCGCCCCTGCTGTTTGCTTGGAGCCTTTAAATTTCTGTATTTAATTCTTATGATAAATGAGTCACCATGATCCCATGGAATTAGGTCTTTTCAAAACTGAAACTCTCTCCAGTCACAGAAGATAATCAGCTGTTCAGAATGATGCTCTGGACGGCCAGCATTCCGAGAATGTATTCAGACCGAAACTCTGCCTACCGCCTTTTTTCCTTTTACACATTAAACAGGTTGAGAACCAAA EMBV3_37578 GCACCTTGTTGGAAAGTTCTGTATAGGTGAAAGCAAGGCATGTCGGGATTGGAAGGAGGG Gene BVT0102_207236 + 0 NULL GK000023.2:29844323-29855533 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133075 TCONS_00133074 1 XLOC_080997 Coding TCONS_00133075 XLOC_080997 Coding Coding LOC507236 23:29854279-29868093 j TSS99455 4378 1 TCONS_00133075_4 647 0.280493375970763 6 0.683486570621878 0.000215225296618926 0.000125285713863692 3.08343829864176e-05 0.000107786018140926 0.00112084087707297 0.000266766796842953 0.000134341447102929 7.64256915629648e-10 0.000163546232088643 7.05039631582306e-05 1.843436608217e-06 5.24790931442137e-05 3.80891565260165e-05 5.513488715119e-11 0.000454736027666606 0.00205149133681237 4.04704520595084e-05 0.00136636195721661 0.000124884641473209 0.000255870643617709 9.54412959441588e-05 0.000439605921892596 0.000127782528115272 0.000247024269244229 0.000425989397659481 2.93953602621248e-05 4.36494854734472e-05 3.1775087804088e-05 1.20417301481637e-05 0.000130105098217042 XM_003583908.2 ZNF311 PREDICTED: Bos taurus zinc finger protein 311 (ZNF311), mRNA. 0.0 7809 99.03 0.999771585198721 NM_001010877.2 ZNF311 Homo sapiens zinc finger protein 311 (ZNF311), mRNA. 0.0 2360 81.03 0.568296025582458 TCONS_00133075_4 sp|Q5JNZ3|ZN311_HUMAN ZN311_HUMAN Zinc finger protein 311; 0.0 1003 76.73 0.996908809891808 7 coding 0 0 0 0 -0.2000999182885 0.279416275092149 0.00480395328543705 0.930728557232692 CTTACTTTTTTTTTCCTCATTTATTTTCCTCCGCAGCATCCATTCGTGCGTTCTTTCATTTGGCCAATTTCTAGCTGAGCGACTGCTGGTGCAGGCACTGTTTTAAACGTTGGGAATAGGTCAGTGAACAAAATAGACAAAAAGTCCGTGCTCTCAAAAGCCTAGGAGCTTACATTATAGGGAAAGGAAGACCTACAATAAACAATGGAAAGTATATAATTAACTTATGCACCTTGTTGGAAAGTGCTGTATAGGTGAAAGCAAGGCATGTCGGGATTGGAAGGAGGGGGTAGGCTGTAATTTTAAATAGGGCACCTAGAGTAGGTTTCCTAGGGAGGATTACATGCAAGCAAACAGTTGAAGGAGGCAAGATTATTCATCTTGAGGATAGCTTGAGGTAGAGGGAACAGTCAGTGCAAAGTCCCTAAAATGGAACCGTGCCTAAAAAGGAAGAGAAAGATCTGTGGGACTGAAGGGAGTTGAATGGGGGGGAGAATAGTAGGAGAGGTAATAGCAACCCTGTAGACTTATATGCCACTGTAAGGACTTTAGCTTTTATTTTGAATGAACAGAGGCGATGCAATGAGATTCTTTAGGGCCTTATATGCTACTCCTTATTTTGAGTAAGATAGACGCTTAAAAGCAGAGAGCTGAAATAATCCAACTAAGTTTTAAATAGCCCACTTTATTGTATTGAGAAAAGACAAATAGAAGACAAAAGACAAGGACAGAAGCAGGAGACCAGTTTGATGGCTAACACAATACAGGTCAAGGCAGGAAATGGTGGCTTGGGCCAAGATGGTGGCAGGAGAAGTTGTGTTCTGGATATATTATCATCTTCAATTTGTTCCTCTTCTGCCTCATCTCTCATAGATACTCCAGATTCTCAGTGATTCCTTCTTTTCACTTTGGTCACATCCCTCTATTCTCTCTTCCCTTCATCAAATATACAGGAAAACAAGGTATGGGATCACCTCTAGCTTATTACTGCTGATAAACCCCACATCTAGGGCAGTATTGATACATCAAACCAAAAAGCAGCTGCCCTGTGGGTCAAGAGCAGTCTTTTGACTGGTATCACCAAGGCTTATATCCCTGAAGGGAGGCTGATATCCACTGGAGCCACTTCAAAACTGGTTATCTGGGCAAAGCCAGGATTGACTTTAGGAGCTGGATCCAACCAGCAGAGAAGAAACTGGGACAGTGTTAGAAGACTGGAAAAGAAAAGAAAGAAAGAAGACTGGAAAAGAAGACATGCAGCAGATCGTGATATCAGATGAGAGTCCAGGATCACCAAACCAGCTTTGCATCCCTGATAGCATGTTCCTACAGGAAAGAGCTCTACCATTTCCTCAGTGCCCTGCCTTAGCCAGAGATGGAAGCCAAGGAAACCTGCCAGGAGCAAAACATACAGTGATGAGCCAGCCTCAAGAGTCAGTGACATTTGAGGATGTAGCTGTGAACTTCAGTCATGAGGAGTGGCAGTGTCTGACCCACGCTCAAAGACACCTCTATAAAGATGTGATGTTGGAAAATTATGGGAACATGGTGTCACTTGGATTTTCATTTTCTAAACCACCTTTGATCTCCCATCTGGAGCAAGGTACAGAGCCCTATGTTCAGGATCGACAGGACTGGGAGTTCCTGAGCTGCTCCTATCCAGTATCAGCTGCCAAGACATGGCCTGAGAGTGAGAAGGCAAGATCAGAACAGGAGGTTTTTGAAAATGGAGAAGTATGCTGGGTGAAATTTAAAAGTCTCCTAAAAGTTGTTTCCCAGGATCCAGAGGTTGGAGAAGTTTGTGTACAAGATGTCAAATTAGAGAATCAATGGGAAATGCCTGTGAGAGAGAAATGGAGAGAAGAGAAAGAAAGCTGTGATAAAGTGACTTTCAGGAAAGGAAAGAACCAGAAGGGACTTATAAAACACTTCAGTCCAAACTCAGAATGTATTCTGTATGGAGTTCTTACGGAAAAGAAACAGCATGAATGTACCCGATGTGGCAAAAACTTCAGTTGGCATTCTGACTTAATTCTCCATGAGCGAATTCACTCTGGCGAGAAACCCTATGTGTGTAATGAGTGTGGGAAAGCATTCAAGACCAAAAATCAACTTTCCATGCACCAGATAATCCACACAGGGGAGAAACCCTTTAACTGTACCCAGTGTGGGAAGGCCTTCAGTAGTAGATCCGCTCTTTGCCGACATAAAAAAACCCACAGTGGGGAGAAGCCACACCCGTGCAGTGACTGTGGGAAGGCCTTCAAGACCAGGTACTGTCTCAGGATGCATCAGATCATCCACACAGGAGAGAAGCCTTACGAATGCAGTGACTGTGGGAAGGCCTTTCAGTTTAAGCATTCCCTCATCATCCACAGCAGGAGCCACACTGGGGAGAAACCCTATGCATGTGAGGAGTGCGGGAAGGCTTTCAGCGGGAGTTCAGACCTCATCAAACACACAAGAGTCCACACTGGGGAGCGACCTTATGAGTGCAATGAGTGTGGGAGGGCCTTCAGCTGGAGCTCAGACCTAAGCAAACACAGAAGACTCCACACTCAGGAGAAACATTGTGAGTGCCCTCAGTGTGGAAAAGCCTTCAGCAACGAAGCAGAGCTCACCAAACATAGAAGAATCCACACCAAAGAGAAGCCTTATAAGTGTAAGGAGTGTGGGAAAACCTTTCATCATAACTGTAAATGCCGGGCTCATGAACGAGGACACACTGGGGAGAAGCCCCATCGATGTGGGGATTGTGGGAAAACTTTCCAAGATCAACACTGCCTTACCATCCATCAAAGAATCCACACCGGAGAGAAACCTTATAAATGTTCAGACTGTGGTCGAGCTTTCAGTGGGAAATCAAACTTGACCAATCATCAAAGAATCCACACCGGAGAGAAACCTTACAGGTGTGAGGTGTGTGGAAAGGTCTTTCATCAGAGCTCAGTCCTGAGACAGCATGAAAGAATCCACACGGGTGAGAAGCCATTTACCTGCCATGAGTGTGGCACGTCTTTCCGTCAGAGTTCGGCCCTGATTGGACACAAGCGAGTTCATACTGGAGAGAAACCTTATATATGTGAGGAGTGTGGAAAAGCTTTCAGAGTGAGCTCAAATCTTACTAGACATAAGAAAAGAAAACATAGAGTGTGGGAAACCCACAAACGTGGAGAGAGTGGGAAATCTCTCCAGTAACTGGTTCTCAGACCTTTTCATTCATCAATATTTTGACCACCAACACCTGAGAGTACTGATTCTGGTGTTTACACTTTATCATTTCTTCTTCTACTTCTTATACTGATCACTCTTGTCTCCTGTGTTGGTTCTTCCTGGTTCCCTGACCCCTCTAATTGTGAGATCTCTCAAGCCTTTGTCCTTGACCTTCCCATTCAGTGTTTCTTTGGTGAGCACATTCACTTCCAAGATTTTGTCTATCAGTAATAGTACTGTAATACTACATACTAGTGCCCTACACATGCCAGGCACTATTCTTTACAGTTTTAAATAATTTAATCATACAACGTCCCTGTGGGATGAGGAAATTGAGGCATTAAAAAAATTAAGAAACCTGTCACGGATCCTGTAACTGGTAAATTCTAAACAAATGCCTGCTGAATGCTCAGACTTCTCTGAGCAATTTCTGTAATCCTGTACCACATTTCTTGAATGTGAGGCTATACCTCAGTTTAGCACAGAACATTTTTTTGATTAATAAACATTGATCACTTTTAGTAAGTTTTTTATTTTTTTTTTTTTTTGGCCACAGTTCTCAGTTCCCTGACTAAGAACCAACCCTGTGCCCCTTAAGTGGAAGTAAGGAGTCTTAACAACTAGACCACCAGGGAAGTTCCAGCAAATTTTAAATTAAAGCTTAAATGGTACTCTTCTATATAGATTCAAAATTTCTGAGATTCAGCAGAGGAAGGAAGACAAGGCAAAGGCAGATTTTTTAAATTACAAATAAATAGAAATCAAGTGTGAGCTTTCCAGGTGTTGCAGTGGTAAAGAATCCACCTGCCAATGTAGGAGATGCAAGAGATGCAGGTTCAGTTCCTGGGTCAGGGAGATCCCCTGGAGCACTACATGGCAACCCACTCCAATATTCTTGCTTGGAAAATACGATTGACAGAGGAGCCTGGTAAACTACAGTCCATGGGGTTGCAAAGAGTTGGATGTGACTGAGTACACACTGAGAAGTCAAGAGTACACAGCTCAAGTGGAAGTTTACATATGGAAGAGCATGAAGCCTGTCCCACTTTGTTATAAATGTACTAAAAGGTCTTCAAGGTGTTGATTTCTTAAATATTTGTTTTATCTATCTGCATGACATATGAAATGCTCTTTCACAAGGATTAATAAATGTATATCTTTTCAA EMBV3_02497 CACTCACCCACTCATTGCCTTCAACCTCCTCCTTCTCTGATCCCCAGTGAACCAACTTCT Gene BVV0102_113602 + 0 NULL GK000010.2:51453481-51500295 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00021149 1 XLOC_011822 NonCoding TCONS_00021149 XLOC_011822 NonCoding NonCoding - 10:51489530-51490932 - TSS15039 1402 3 TCONS_00021149_1 56 0.564194008559201 1 0 0 0 3.30027879741265e-05 0 0 0 0 0 1.12555425753822e-05 2.93473530327445e-06 1.63279936378423e-06 0 0 0 0 0.00016954631492953 0.000118418637064482 0.000178965188161775 0 1.02588294167958e-05 0 5.2929250550557e-06 0.000150501528163914 0.00130338565221482 0 0 0 0.000383659015882775 0 0.000441698354120676 XR_226259.1 TARM1 PREDICTED: Bos taurus T cell-interacting, activating receptor on myeloid cells 1 (TARM1), transcript variant X4, misc_RNA. 1e-38 165 73.79 0.21398002853067 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 4e-52 210 68.70 0.402995720399429 0 noncoding GGGAAGTAGTGGTGGAGCCAGCAGTGGCAGAGGTGGTTATGGCAGAGAAGGTAGAAGTTGGTTCACTGGGGATCAGAGGAGGAGGAGGTTGAAGGCAGTGAGTGGGTGAGTGGCTCTAGTGACTAGCTGCTCTCACCAAAGAGAGATCACAGCAAAAAAGAAAAAAAAGAGAAATCACAGTGACTAGAGGGAGTGGGTATGGGAGGGAACTGCACTGGTAATTTAATAGGGATTACACTGAATCTATAGATTGTCTTGAGTAGTATATTCATTTGACAATACTGATTCTTCCAATCCAAGAACTTGGTATATCTTTCCATCTCTTTGTGTTATCTTTGATTTCTTCCATCAGTGTCTTACAGTTTTCAGAGTACAGGTCTTTAGCCTCCTTAGGTAGGTTATTTTTACTATTTTTGATGCAATGGAAAATGGGATTGTTGCCTTAATTTCTGTTTCTGATCTTTTATTGTTAGTGAATAGAAATGGAAGGAATTTCTGTGTATTAATTTTGTATCCTGCAACTTTACTGAACTCATTGATGAGCTCTAGTACTTTTCTGGTAGTGTCTTTAAGATTTCCTAAAAACAGTTAGTTTTACTTCTTCTTTTTTCGGTTTGGATTCCTTTTATTTCTTTTTCTTCTCTGAATGTTGTGGCTAGGACTTCCAAAACTATGTTGGGTAAAAGTAGAGAGAGGACATCCTTGCCTTGTTTCGGATTTTAGAGGAAATGCTTTGAGCTTTTTACCATTGAATATGTTAGCTGTTGGTTTGTCATATATGTCCATTATTGTGTTAAGGTAGGTTACACTTTCCAGTGAGTTTTTATTATAAATGATAGTGAATTTTATCAAAAGCTTTATCTGTATCTATTGAGCTTGAGCTTTTTCTGGTGAAAAATCAGCTGATAACCTTATCAAGAGTCCCTTTGATGTTATTTGTTGCTTTTCTATTGTTGCTTTTAATATTTTTTAAAAATTTTTATCAATTTGATTGATATGTATCTCAGCATATAAATAAAATCTCAGAGCTAGAGTGATAATGTAACTATATACTAAGCAACTAAATTATAAATGGCATTAAAATTTACCCTGAAGTTGGAAATTCAGATTATCATTAGCAAATACAGATTATCATTAGCAGAAAAGTTTGACTGCACAGAGACCATAATAAATGAACTGGTTGCAGACTCATATCAAAATCCTATCAGTAAGTGACAAGTGACAATTAAATTATATCTGGTAGGCAGGCTTTATAGTGGCAACTGAGTTGATGTACTTCAACTGTACAGCTGCATCTGGTGACAGGCAGATGATGATCCTGACTTGAAATCAGATCCAACAATTATTTTAGTCCATGCATGACCCTCCCATTATTCTGTTTGCCACTTCAGTCTGTGCCTCT TCONS_00017266 . 3' 3881 TCONS_00017266 . 3' 5282 EMBV3_26778 GGGTCTCGTCACCCTCCTCGTGTACAACCATAAGACCCGTGAAGCATAAGTGGCCTTTTT Gene BVT0101_017941 + 0 NULL GK000016.2:44058199-44079576 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069297 TCONS_00069294 TCONS_00069296 TCONS_00069298 TCONS_00069299 TCONS_00069295 TCONS_00069293 1 XLOC_041912 Coding TCONS_00069294 XLOC_041912 Coding Coding KIF1B 16:44075819-44227151 j TSS51692 9768 1 TCONS_00069294_12 1693 0.00819000819000819 47 0.935763326747329 0.000196486743836945 0.000762559312973899 5.20181240033768e-06 2.17872326225962e-20 0.000269411725052838 1.42761252045302e-36 7.43681896380611e-07 0.000231987362374536 2.65051126613363e-05 8.18183052447089e-05 0.000287616679412058 2.48153265083618e-05 3.8715886799658e-05 2.72981081859659e-05 5.30329697568115e-20 0.00270556074390218 0.00275355584362352 0.00205248884325239 0.000129014985303812 0.00124143278513847 0.000276621026659883 0.000268473878134721 0.000349253143473987 0.000801720352436558 0.00129135287152252 0.000367193763331294 1.0106889564479e-07 0.000162657785591297 3.94321856178161e-19 0.000203004740502147 XM_005216997.1 KIF1B PREDICTED: Bos taurus kinesin family member 1B (KIF1B), transcript 0.0 1.762e+04 100.00 0.999897624897625 XM_005263433.1 KIF1B PREDICTED: Homo sapiens kinesin family member 1B (KIF1B), 0.0 4154 85.28 0.367321867321867 TCONS_00069294_12 sp|Q12756|KIF1A_HUMAN KIF1A_HUMAN Kinesin-like protein KIF1A; 0.0 2449 72.13 0.998818665091553 0 coding 0 0 0 0 -2.95396718765887 0.0198407312736545 -0.11329050212301 0.197564735225429 GGAGCTTGGAGAGGACGGACGCTGAGCAGTCTGACGGCGGCGGTCCTGGGAGGTGCCAGCGCGAGGCTGAGCCGCTCTTCGCCGGTCGCCGCGCCCGGGTCTCCTGGACTCCCGCCCTCCGTGGCCCTTGATGCCGGGCTCGCCAGCTGTGTGATGGGGCTGCCGAGCGGCGCCCTGCGGCTCTCGGCGGCCGCTGCTCGCGCTAAGGAACGTCGGTGCCGGGTTCCCCGCGCCCCCGCGCGTCGCGGCCCTTGCTGACCCTGCCCTCCCGCCCGCCTGTCAGTCTGTCCGCAGCGCGGCTGAGGAAACTTGAACATAACTTCCTGAGAAGATTTGATTCTTTATTTCTGGACTTCGTATATATAACAAGACCGTCAGAATGTCGGGAGCCTCAGTGAAGGTGGCTGTCCGTGTTCGGCCCTTCAATTCTCGAGAGACCAGCAAAGAGTCCAAGTGCATCATTCAGATGCAGGGCAACTCAACCAGTATTATTAACCCAAAGAACCCAAAGGAAGCTCCAAAGTCTTTCAGCTTTGACTACTCCTACTGGTCTCACACCTCGCCCGAAGATCCCTGTTTTGCATCTCAAAACCGTGTATACAATGATATTGGAAAGGAAATGCTCTTACATGCCTTTGAGGGATATAATGTCTGTATTTTTGCCTATGGGCAGACTGGTGCTGGAAAGTCTTATACAATGATGGGTAAACAAGAAGAAAGCCAGGCTGGCATCATTCCACAGTTATGTGAAGAGCTTTTTGAGAAAATCAATGACAACTGTAACGAAGAAATGTCTTACTCTGTAGAGGTGAGCTACATGGAAATTTACTGTGAAAGAGTACGAGACTTGCTGAATCCCAAAAACAAGGGTCATCTGCGTGTGCGTGAACATCCCCTTCTTGGCCCTTATGTGGAGGACCTGTCAAAGTTGGCAGTCACTTCCTACACAGACATTGCTGACCTCATGGACGCTGGGAACAAAGCCAGGACAGTGGCAGCTACCAACATGAATGAAACAAGTAGCCGTTCCCACGCTGTGTTTACCATTGTCTTCACCCAGAAGAAACATGATACTGAGACCAACCTTTCCACTGAGAAGGTCAGTAAAATTAGCTTGGTGGATCTAGCAGGAAGTGAACGAGCTGATTCAACTGGTGCCAAAGGGACTCGATTAAAGGAAGGAGCAAATATTAATAAGTCTCTTACAACTCTGGGTAAAGTCATTTCAGCCTTGGCAGAGGTGGATAACTGCACCAGCAAGAGTAAGAAGAAGAAGAAAACTGATTTTATTCCCTACAGAGATTCTGTACTTACTTGGCTCCTTCGAGAAAATCTAGGTGGCAATTCTCGGACTGCAATGGTTGCTGCTCTGAGCCCAGCTGATATCAACTATGATGAAACTTTGAGCACTCTGAGATACGCAGATCGTGCAAAACAAATTAAATGTAATGCTGTTATCAATGAGGACCCCAATGCCAAACTGGTTCGTGAATTAAAGGAGGAGGTGACACGGCTGAAGGACCTTCTTCGTGCTCAGGGGCTGGGAGATATTATTGATACATCCATGGGGTCCCTTACTTCATCTCCATCTTCCTGCTCACTCAATAGTCAGGTGGGCTTAACATCTGTGACCAGTATTCAGGAGAGAATCATGTCTACACCTGGAGGAGAGGAAGCCATCGAACGTCTGAAGGAATCAGAGAAGATCATTGCTGAGTTGAATGAAACCTGGGAAGAGAAGCTGCGTAAAACAGAGGCCATCAGGATGGAGAGAGAAGCCTTATTGGCTGAGATGGGAGTTGCCATTCGGGAAGACGGAGGAACCCTTGGGGTTTTCTCTCCTAAAAAGACACCACATCTTGTTAACCTCAATGAGGACCCTCTAATGTCCGAGTGCCTGCTTTATTACATCAAAGATGGAATTACAAGGGTTGGCCAAGCAGATGCTGAGCGGCGCCAGGACATCGTGCTGAGTGGGGCTCACATTAAAGAAGAGCATTGTATCTTCCGGAGCGAGAGGAACAACAGCGGGGATGTTATTGTGACTCTGGAGCCCTGTGAACGTTCAGAAACCTACGTAAATGGCAAGAGGGTGACCCAGCCTGTTCAGCTGCGCTCAGGAAACCGTATCATCATGGGTAAAAACCACGTGTTCCGTTTTAACCACCCGGAGCAAGCACGGGCTGAGCGGGAAAAGACTCCTTCTGCTGAGACCCCCTCTGAGCCTGTGGACTGGACGTTTGCCCAGAGAGAGCTTCTGGAAAAACAAGGAATTGATATGAAACAGGAGATGGAAAAAAGGCTACAGGAAATGGAGATCCTATACAAAAAGGAGAAGGAAGAAGCAGATCTTCTCTTGGAGCAGCAGAGACTGGACTATGAGAGTAAATTGCAGGCCTTGCAGAAGCAGGTGGAGACGCGATCCCTGGCTGCAGAAACAACTGAAGAGGAAGAGGAGGAGGAAGAAGTTCCGTGGACACAACATGAATTTGAGCTGGCCCAGTGGGCCTTCCGGAAGTGGAAGTCTCACCAATTCACCTCATTAAGGGACTTACTCTGGGGCAATGCCGTTTACCTAAAGGAGGCCAATGCCATCAGTGTGGAACTAAAGAAGAAGGTGCAGTTTCAGTTTGTTCTGCTCACGGACACGTTGTACTCCCCTCTGCCTCCTGAACTGCTTCCCACTGAGATTGAAAAAACTCAGGAAGACAGACCTTTCCCTCGTACAGTGGTAGCTGTAGAAGTTCAGGATCTGAAAAATGGAGCAACACATTATTGGTCTTTGGAGAAACTTAAGCAGAGGCTGGACTTGATGAGAGAGATGTATGACAGAGCAGGGGAGATGGCCTCCAGCGCCCAAGATGAAAGTGAGACCACCATGACTGGCAGCGATCCATTTTATGATCGGTTCCATTGGTTCAAACTTGTGGGAAGGGCCTTTGTTTACCTGAGCAACCTGCTGTACCCCGTGCCCCTGATTCACAGGGTGGCCATCGTCAGTGAGAAGGGAGAGGTGCGTGGATTTCTGCGTGTGGCTGTGCAGGCCATTGCAGCGGATGAAGAAGCTCCTGATTATGGCTCTGGAATTCGACAGTCAGGAACAGCTAAAATATCTTTTGATAACGAGTACTTTAATCAGAGTGACGTTTCTTCGGTTGCATTGACCCGTTCTGGTCTGTCCTTGGAGGAGCTGAGGATTGTGGAAGGACAGGGTCAGAGTTCTGAGGTCATCACTCCTCCAGAAGAAGTCAACCGAATGAATGATCTGGATCTGAAGTCAAGCACTTTGCTGGATGGTAAGATGATGATGGAGGGATTTTCTGAAGAGATCGGCAACCACCTAAAGCTGGGCAGTGCATTCACTTTCCGGGTCACAGTGCTGCAGGCCAGTGGAATCCTCCCAGAGTATGCAGACATCTTCTGTCAGTTCAACTTTTTACATCGGCATGATGAAGCATTCTCCACTGAACCCCTCAAGAACAACGGCAGAGGAAGTCCTCTGGGCTTTTACCATGTACAGAATATTGCAGTGGAGGTTACCGAATCATTCGTGGACTATATCAAAACCAAGCCGATTGTGTTTGAAGTCTTTGGGCATTATCAGCAGCACCCACTTCACCTGCAAGGACAGGAACTTCACAGTCCACCCCAGCCGTCTCGACGATTCTTCCCTCCGCCCATGCCGCTATCCAAGCCAGTTCCAGCCACCAAGTTAAATACCATGAGCAAAACCAGCCTTGGCCAGAGCATGAGCAAGTATGATCTTCTGGTTTGGTTTGAGATCAGTGAACTGGAGCCTACGGGAGAGTATATCCCAGCCGTGGTGGACCATACAGCAGGCTTGCCCTGCCAGGGGACGTTTTTGCTTCACCAGGGCATCCAGCGGAGGATCACAGTGACCATCATCCATGAGAAGGGGAGTGAGCTCCACTGGAAGGATGTTCGTGAGCTGGTGGTAGGCCGAATCAGGAATAAGGCTGAGGTGGATGAAGCTGCAGTGGACGCCATCCTCTCCCTCAATATCATCTCTGCCAAGTACCTGAAGTCGTCCCACAACTGTAGCAGGACCTTCTATCGTTTCGAGGCCGTCTGGGATAGTTCCCTCCATAACTCCCTCCTTCTGAACCGAGTGACACCCTACGGAGAAAAGATCTACATGACCCTGTCGGCCTACCTGGAGCTGGATCACTGCATCCAGCCGGCCGTCATCACCAAGGACGTGTGCATGGTCTTCTACTCCCGGGACGCCAAGATCTCGCCGCCACGCTCGCTGCGCAGCCTCTTTGGCAGCGGCTATTCGAAGTCACCAGACTCCAATCGAGTCACTGGAATTTATGAACTCAGTTTATGCAAAATGGCAGACACAGGAAGTCCAGGCATGCAGCGGAGAAGAAGGAAAATCTTGGATACCTCAGTGGCGTATGTGCGGGGGGAGGAGAACTTGGCTGGCTGGCGGCCCCGGGGAGACAGCCTCATCCTAGAGCACCAGTGGGAGTTGGAGAAGCTGGAGCTCCTGCACGAGGTGGAGAAAACCCGACACTTTCTGCTGCTCCGTGACAGACTGGGTGACAGCATCCCCAAATCCCTGAGTGACTCGTTGTCCCCCAGCCTCAGCAGCGGGACCCTCAGCACCTCCACCAGCATCTCCTCTCAGATCTCAACCACCACCTTTGAAAGTGCCATCACACCCAGCGAGAGTAGTGGCTACGACTCAGCAGACATTGAAAGCCTGGTGGATCGAGAGAAAGAGCTGGCTACAAAGTGCCTGCAACTTCTCACCCACACTTTCAACCGAGAATTCAGCCAGGTGCACGGCAGCATCAGTGACTGCAAGCTGGCTGACCTCTCCCCCGTCGGCCGGGACCCCTCTGTGTCCAGTCTGAGCAGTTCCACCCTCACGCCATCCTCTACCTGCCCCTCTCTGGTGGATGCTAGGAGCAACTCCCTGGATCAGAAGACCCCAGAAGCCAATTCCCGGGCCTCTAGTCCCTGCCCAGAATTTGAACAGTTTCAGATTGTCCCACCTGTGGAAACACCCTATTTGGCCCGAGCAGGGAAAAATGAATTTCTCAATCTTGTTCCAGATATTGAAGAAATTAGACCAGGCTCAGTGGTCTCCAAGAAAGGATATCTGCATTTCAAGGAGCCCCTGTCCAGCAACTGGGCTAAACATTTCGTCGTGGTCCGTCGCCCTTACGTCTTCATCTATAACAGCGACAAAGACCCTGTGGAGCGGGGCATCATTAACCTGTCCACAGCCCAGGTGGAGTATAGCGAGGACCAGCAGGCCATGGTGAAGACACCGAACACCTTTGCTGTGTGCACCAAGCACCGTGGGGTCCTTTTGCAGGCTCTCAACGACAAAGACGTGAACGACTGGTTGTACGCCTTTAACCCGCTCCTTGCTGGCACAATACGGTCAAAACTCTCCCGCAGATGCCCGAGCCAAGCGAAGTACTAGGCGACTGCCGAGCACCCTCACACGCCTCCTGAGAGATAAAGAAAGTGTTTCCCCTCATTTCTCTTTGTGATCCTTGATGGTTACTCTTGTGTGTGATCCTGTGGCTTAACTACTCGTCCCTCTCGTCCAGCACTTTTTCGAGTGCTCCTGGTCCCCATCCCCATTGCTCTGTACTCTTTTCTTTTTCCTGTGCTGAGAATCTTGTTAGAAGCATGTGGTCTAACAAAAGTGGGGGAAAAAAACAAAAACACACACACAAAAACCCCAAGGAGATCCAGATTATTTTTTGGTGTCCTTTGGCTTCCTTTTGTATGATGGGTCCCCATTATGACCACTGACACCTGTGCTGCTGTCTTTGGATATCTCTGTCTGTTTTTCAAGATACCATAATACTACTTTCTTTTCTCTGTTTGGGATATAATTTTAACTTTTCTTGGGTGGCTTAGAGACTAAAGGAGGAGACATCTAGTCTTTTTAGAACCCGAGGGGAAAAATCTTACCCTTCCCCTTTCTGTTGCTTCTTGCCATGACTAATCCCTGCATTTTCCATTCAGGGAAACAAATGGTTGTAGTGAGCTTAGAGGTGGGAAAGTGTATTCTCTGAAATTGGGGCTTATTTAGAACATAGCTATGTAATTTTAACATAGTGGAAGAGAGGAGAAGAGAGGGACTTCTCAGCAGGTTTTGGACAGCGGCCGCTGTTGACTGTGTTAGAAGGGAAGAGCCAGGGCTGTTGCCAGTGGGTCTCACAGGCCCGGGGGCCTTGGCGGTGGTGGTCCAGAGGATGCCGGTGTTCCCTCACAGGAGGGCTCCTTGAGCGGTTTGTCTCACTGGTAGGGAGCCTCTTCTGAGTCCCAGTTCTGTTCTGGGCGTTAGTAATGATGGTGGCTCAGTTTGGAATTCCTGCCATGATGTCATGCACAAATATCCCACCAGGAGGGAGTGTCTGCCTTCCTGGTGATGAACCTGATGGTCTTTGTCATCATCATGATTATGGTAAGGCCGGGTAGTGACCTTGTGATGGTTGTAGCTCCCTTTGATCAAAGAAACGTAGCTCTAAGAATACACTTGAACAGAGGAGCCTGGCGTACTGTAGTCCACGGGGTCACAAAGAGTCAGACATGACTAAGCGACTGAACAACAAGAAGATACACTCAGAAGCCTCCTTCTAAATCCAGTGGCCATTTTCAGTGATCCTCGTCCAGTTGGAAATCCCGTCAGTGATACTTGTCTTCCTCCGTGAACAAATAAATACGCGAACGTGGCAGGCTTTGCTTTTTGGACCCCAGGATTATAACAGACTGCCTCGTACCACTGAAAGCAGAAGGACACCTGCGGGCAGAGAAGCAGTTCCACCTGAACCCTGGTCCCAGACGTGGTTGGTTGTCTCCTCTGTGGAAATCCTGCCAGAGGGTAGAGGAGCCCACTGCCCACAGCCTCCTGCTGTGACAACAGGCTCACCTGCTGCCAGAGGCCTTGGCAGAAGATGCACCTCCTCTTCCAGCTGCAGTGAGTGTCCCAGGAATGAACAGGAGAGGAGACTCCGGGTACTTCGGTTCCTTTCCAGTTGACTTGGGGATGTCCTCTACCATCCTTTCCCACGCTTGCTCACACCTTTCTTTCACCATCCCCCAGGTGATCAGGAAAGTGTCTGCTCGCTCCCACTTTGTGGAGACCGAAGGTCCCCAGTCTCGAGGGCACTGACTCTCAGGCAGCAAGGGGGAAGGGCCCACGCACTCCTCAGAACGGGTGCTGGGCAGGTGCGACAGCACCCAGACTGTGGCCTTGCCTTCCTGCCGGGGCTCATCTTCTGGCTTCGTTCATAATTGCTTTGCAAAGAGGAGGAAAAGGAAGTCACTGGAGAGCTGAACAAGAGAAAGAAGAGTAATCAAAGGCTATGGCCTTACCTGAAAAATTATTAAGAAAAACTGTAGTAGATTTTTAAACTTTCTTCCTCTCCTTAAATGAAACATAGGTCACTAACCATAATGTTACTTGTTTCCTAAGTGGTACTTGAGACTTTAACGTGGTTAGAGGCTTCTTATCTAATGGGCACAATATGCCCTTCCAGTGTCTACTCAAACCCAGGGTCTGTTTGTGCTTAGAGACAGCTTCCTGGGCTGAAATTAAGTAATTTCAGGGAACAAAGATGAGATTCAAAGGTTAACGTTTAGAGTTAGGTCATGGATGCTGCTGCTGTTAAAGTCTGATAGGAGGACCCATGTCTGTGACTGAAGGAGGTGGGGAAGTGGAGGGAGAGAGAAATCAAGTGACAGACTGACATGACTTGTTTTTGCTTCTCACTTAAACAAAACTGACCAGGAAAGTCTTTGCTTTGGATGTCAGATACTATGACAGGCTGAGGTCAGAAGGCCTGGTGAGGCGGTGGGGGCCGCGGCCATGGCTCGCCTGTACAGCCCCCGCAGGGGCCCCTCTTCTCTAGGGGCCTGTTTTCAGGTTAAAGCTGGAGCAGGGGTTGATGTTCCCTTTCCAGGTAGGCCCATCCCCACTTTCAAGCTCTGAGAGGGAATTTATGGCAGGAATTAGGAGGCTTTTGTGGAAGAGGAAAAGTGAAAGAACTCAAATCTTTAAGGAAGCTACCTTTTAAGGTAGTTTTTGGGTTTTCTTTTCCCCCTAATGCACTCTTTTAAGCAAGCAGAATAACAACAACAAAGCAAGGAAGAACACTCATACAAATTAAGGAGAAATGAGTGCTATTTAAAAGTAACCGTCTCCTTCCTCCCCGTGTCCTCCTTACTCCTGTCGGAGCAAAAGACGGACCCATGGCTTCCACCAGACCAGCGTCCGCACCCTCCTTGTCTCTGCGCCAGCCTAGGGGTCGGTCAGCTCCTGGGCTGGGCTCTGCGGGGTCAGCCAGCCTGCGCACGGCCACCAGCGCAGAGAGGGGCTGCCTCTGGCAGCTGGGTGGGAACTTGAATTCCAGTCCATTTTTATAATGTGAGGAAAGTTGAGGGAAATGATTTCTCCCAAGAAACCACTTCTTTGTTCCCCTTCAGCTGTATAGAACTTATACAACTGCTACTTTCAATGGGGTTTTTCAGCTCTTTTAAGATGAAGGAATCAGTTAAATCACTGCAAGATCTTTTGGTACCTAAAGTAAAAACGACTTCTCCTGGCACATATATCAAAGCAAAGACTTTGTTGCCTGCTGCTTGTTGTCTAATTTACAGGGATATTTAATTTTATAAGGCATTTGTATATTTACACAGCTGTAATTAAATTGCACATTGAACTGGAAAAGCAAGCTGATGCGCTCGTAGCACCTGTTGGTACTTGGCACCCCTCATCCCGGTTCTACTCGGCTTCTCTATCAGGGCTTGTCCGTTTCTTGTTTGACGTGGGTCCTTCGTTTTTCCCTTTTGGTTCCCTTTTTAAAATGTGATTGTTAACCTGCTCTTTAAAAAGAAGAGACTAATCCTGCTGCTGCTCTCAGAAGGTTTGCTGAATGTATTTTCAATAGGACTCTTAACTCCTGTGCACTGCAGCTGTCCCTTGTGGCCTGTGACGCTTCACCAAGGTGTGGCCAGACCGTGACCGTGTAGCGGGAACAGATTGACTTGTGTTTCCTTAGTAAATAAACGGCTTGATCGGCTGAGAGACTCCCTGCTGCTGTTGTTCAAAAGGCCATTTATGAAACTTGAATTTGAGCCCCATCAAATTTTAGGAAAGCCTCTGATCGCTTAAAGGAAGGAATCAGAGTTGATACAAATTTCATATTACAGAGTCACAGCCAAATGGCCTGTGCTCAGGTAGGAAGTCCTAGCTGATGTTGGTCTCTTGCCAAACCCTGGCTGTCGCGTGTTGTTTTCACGTCTTCGAGTTCATCCTTTTCATTTGCACATCCTGACATCAGTTCATCTGAGGAACCCAGCAGCCTTCTATGAGTCGTCCCCAACTGGTGGTTCTGAAGCATTTGTCCCGCGAGACTTCGGGTCTCGTCACCCTCCTCGTGCACAACCATAAGACCCGTGAAGCATAAGTGGCCTTTTTGAACCAAGACTTTGCAAACTGATCTCTCCCCAGGGAAGGAGTTGAGCACATTAGCAACAATGTACATTATTAATTTCGGATTTTCATTTTCATGTTTTATTATGTAAATATGATCTGACGTTCGGAGCTTGAGTATACAGAATGTAAATATAGTTCTTGTATTTGTACTAATTCTGGTTCTTTTGCTGTATAGCCTTAGGTGTGCAATGCAGACATTAACTGTGTATGGTAACCTTGCATCACGGAACTATTAGTGAACGAGGTCATATTAATAAAGGTACAACCAGTGCATCAGA EMBV3_43402 CAAACCCGGCAATTCTCCAATTGTTCACCTCACTGAAGACCACCATGCTTCAGCACTTCC Gene GeneID:506214|BOLA-DRA:NM_001012677:6_cdna Constitutive 0 NULL GeneID:506214 23 GENE BOLA-DRA NULL major histocompatibility complex, class II, DR alpha EMBV3_23075 CCCATGGGTGCACTACAACCAGGGATCCCATCACCTACTACTATTCCTCAAAACTGGCAC Gene BVT0102_439250 + 1 EMBV3_07317 GK000018.2:58876661-58930233 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31031 TGACGAGAAGAGACAATCCATGGAGCCAGGTTTTCCCAAGCAAATAGTGGAAGATTTTCC Gene GeneID:281309|MMP3:XM_002683747:5_cdna Constitutive 0 NULL GeneID:281309 15 GENE MMP3 NULL matrix metallopeptidase 3 (stromelysin 1, progelatinase) EMBV3_35262 AGCATGTCCCACGACAGTGACATCTTGTTTGGAAGTGCCTCCTCGGACACCAGAGACAAT Gene GeneID:539813|KCNG1:XM_002692503:625_cdna Constitutive 0 NULL GeneID:539813 13 GENE KCNG1 NULL potassium voltage-gated channel, subfamily G, member 1 EMBV3_30348 CGCTTGTGTCATTCTGGGTTTTAAAGAAAGGCCATGGCTGTTATCTTCTCAAATTTTAGC Variant GeneID:534488|SLC35A5:NM_001076025:95_cdna 410^543 1 EMBV3_04742 GeneID:534488 1 GENE SLC35A5 NULL solute carrier family 35, member A5 EMBV3_28578 ACGAAATCGCTTCCTGGATTTGCTTGGAGATGTGTTCTTTGTGATCCCTGGGCTGGTCAC Gene GeneID:513992|CES7:XM_002694883:896_cdna Constitutive 0 NULL GeneID:513992 18 GENE CES7 NULL carboxylesterase 7 EMBV3_32447 GAAAAGTCCCTCCAAGTTCCTGTCTTGCTTCGTATGTGACGATGCGGTTGCAGTGCTTCA Gene BVV0102_220422 - 0 NULL GK000023.2:49548397-49632550 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138214 1 XLOC_084422 NonCoding TCONS_00138214 XLOC_084422 NonCoding NonCoding - 23:49629354-49630772 - TSS103504 1418 2 TCONS_00138214_2 108 1 0 0.000978689683446598 5.66906987004413e-05 5.87349004269421e-05 0 0 0.000302712895680979 3.70137110972759e-05 0 0.000166928173617289 0.00038881661354683 0 0 0 9.95200613601982e-06 1.03798246632326e-05 0 0 0 0.000707991194054919 0.000202861229471936 0 0 0 0 9.28357188971599e-05 2.98114952956192e-05 0.000619797220195578 0 1.02706922454416e-05 4.23995311914302e-06 0 noncoding GGGAAGGGCGGGGGCAGAGGGAGCAGAGGGCGGGAAGGGGGCGGTCACAGCGGCGAAGCGCTGAGGGTCAGCGGTGTCCGATGCTAACGAAGAGAGAAGACCAGAGACCTGGGCACGGCCCACTCCCGTAGATGGGCGGCGCAGCGAACAGGAGGAAGCCGGCGGACGACGTCCCTCCCTCTGTCAGTCACCCCCTCGCCAGCCTTTCAGCAGCTCCCGAGCCAGGCGTCTGCCGTGGTTTCCTTTTGGGTCCACAGCAGCACCCACGCCGCCACCTTCCCTCAGCCCAGCTCTCGGGGCCGAGGGGAGCACGCGCCCCCAGGCCCGGCCTCCCCGCTGGAGAGACGCTGGCTTCAGAGCCCACTCTGGACCCGGGGCCCAGCGCCGCGTGCGGGGGCCTCTCACCCAGCCCTGGGGACAGAGGCAGGGTGGGTGGGGTGTCATGACCCGCATCACGGGCAGGGGAGGTGGCGGAGGTCCGGCCGTCTCCACGGTGTGGCTCCACGTGGCCGCGGACACTGCCGTCCAAACAGGCAGAGCCCGCGGAAGTGCCCGGATGGAGGCCCGGCCACGGCCTGAAGAGGCGGGACTCGGGCCGGCCTGGACCGTGCACGTTACGTCATTTTTCCGTGTTCTGTCGGCAGAACTGGGTCATGTGGCGGGACTTGGCTCCGAGGGAGGCTCTGGGGGGTGGTCTAGCGGGGTCACGGGGGAACGGAGAAGCTTTCCAGGCTCTGGTGGTCCCGGCCTTGAAGACGTCGCACAGTGAAACCCAGCCCCCTTTTCCGGTCCGTCTTCCTGGTGGTTGACGCCGAGGCCGAGGGGAGCATCGCCTAGGGTCCCTAGGTGCGCCGAGCACAGTCCCACCCCCTCTAGCGGAAACACTCCTCTCCCAGCCCCTCCCTACTTCCGGGAATCCCACTCACACTCTAAGCCACGGGCAAAGGGCGTCTCTTCCCCGGAGCCCTCCTGAGTTGCAATTATTCTTTCCCTCCTGTTACTTGTTTGCCTCAGACCCCGTCTCTCTTGGTCTCTGCTTGTATGAAAGTCGTCACAGTTCCATAATCCCCTCTGTGGGCTGCACACACAGGCAGGGCAGGGTGAGTACGCAGTTACCTTTGCTCACCCCACACCTCCCGGAAGGGCGGGTTCTACCGTCCCAAATCAGGAGGTGTGTCCTGAGAAGTCCCGGATGGAGTGGCTGACCTGTGAGATGGTGACGCTCTTCCACATGTCCTGGAGAAGTGAGAGAGGCTCAGCGAATCCTGCCGGCATGGGAGGCAGTTGAAGCATTGCAACCGCATCGTCACATACGAAGCAAGACAGGAACTTGGAGGGACTTTTCATGGCAGCAGCGCTGGCTGGTGACACTTCCTTGGGGCCCCGGTGGACCCACCTTCTCACCAGCCTTCCCAGAC TCONS_00135437 . 5' 77973 TCONS_00135437 . 5' 77973 EMBV3_28038 GGACGACAGCAAGGAATTGCAGCGGTTCAAGGCTGCTCACCTCAGGCTATCTGCAGCGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10971 GCCTTCATGGAAGAGCCTGTGACCATCCCAGATAAGCCCAACAGTGAAGAGGAGATCATC Gene GeneID:521249|LOC521249:XR_082698:16_cdna Constitutive 0 NULL GeneID:521249 9 GENE LOC521249 NULL hypothetical LOC521249 EMBV3_39478 ACCCCCTCTGGCCACTATCCCCAATCCCTGGCAACCACTAATCTGTACATCATCTCTGTA Gene GeneID:100138153|CNNM3:XM_002691165:225_cdna UTR3_Alt 2 NULL GeneID:100138153 11 GENE CNNM3 NULL cyclin M3 EMBV3_12942 TCTGAGAGGTTTGCCTTTACTGTTTTCAAGGGCTGTTGTGAAAAACGCCTCGCCCCCATA Gene GeneID:539018|ZFP64:NM_001103287:1228_cdna Constitutive 0 NULL GeneID:539018 13 GENE ZFP64 MGC148438 zinc finger protein 64 homolog (mouse) EMBV3_34581 CCCACCGTGCAACGGGGCATCGTCAAGATGCCCTGGGCATTTCCTGCTCGAGAGTTCCTT Variant GeneID:404098|SND1:NM_205784:146_cdna 258^407 1 EMBV3_21929 GeneID:404098 4 GENE SND1 MGC129117 staphylococcal nuclease and tudor domain containing 1 EMBV3_16253 CCAGTGGCGCCCATGGCGAGGAGGGCTCAGCCCTTTCCCTGGGGAGATGGTAACCATACC Variant GeneID:282199|COX6A1:NM_001077831:15_cdna 121^263 2 EMBV3_42334 GeneID:282199 17 GENE COX6A1 VIA_L cytochrome c oxidase subunit VIa polypeptide 1 EMBV3_11283 CCCAAAGAGACAGAAGCAGAGCTGCATGGTAGGAGACTGGATGGCTGTCTTCTGTTCAAA Gene BVV0102_113228 + 0 NULL GK000008.2:91314899-91612820 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228615 TCONS_00228614 1 XLOC_138540 Coding TCONS_00228615 XLOC_138540 Coding Coding - 8:91597488-91606853 - TSS170397 5402 1 TCONS_00228615_4 317 0.230840429470566 3 0.423430158052114 3.66256048646626e-09 0 2.14300961391334e-05 9.76529283821417e-06 3.80806145354561e-06 1.11929429708488e-05 1.45233996868032e-09 4.26992438546138e-05 0.000199834905165405 0.00436629672386748 0.00209546688441066 0.000991962993650924 0.00358179622181309 0.0079509763427156 0.00389208105915498 0.00275268691964659 0.00312502153193561 0.00290865302893208 1.50454445435861e-51 4.04861190187705e-09 0 0.00248352812449829 0.00419973901217071 0.00395929065956441 6.14696219940705e-05 1.78133431387188e-09 1.43779102134714e-09 0.00194157189617967 0.00136311688022446 0.0031017813898835 XM_005210476.1 LOC101904508 PREDICTED: Bos taurus double homeobox protein 4C-like (LOC101904508), mRNA. 0.0 2774 100.00 0.284524250277675 TCONS_00228615_4 sp|Q93352|HM36_CAEEL HM36_CAEEL Homeobox protein ceh-36; 2e-12 66.6 43.66 0.211356466876972 1 coding 0 0 0 1 0.0307101392850768 0.764024005635474 0.143739479757362 0.0235597027295699 TGCTCAGTCCATTGGAATTCAAGAAAAGTGGGCCCTGATATACAGCATAAATGTCTAAATCTTGACTCATGACCTTCTATGTATTAGATAGGCACAGCAGCAGCTTTTATAATAAAGTCCGTTTCATGATTAAAAAAATTTTTTTTTCTTTATTTAAATGTTGATCAGAGGAAATGGATAAGGAAATTTCAGTAGCAAGTTCTGTAGTAGCGGGGTAGGAAAGTGTGACTCAGTCTGGCCCTATGTTTGCTACTGGGGGACGTTTGCTGTTGGGCGACGCTTGCCGCACTGCACTTGGGTATATTGTGGGTGCAGAAGAGTTGACTTTCATTCCTTAACTAATTCATCTGCCGTCATATCCCTTAAAACCAATCACCTTGATGACGCTGTGTGGTCTGGTCTACGCTATTCTGCGACGGGGTGGGGGCAATCTCCAATCAGGTTTCCTAAATCCTGACCCAGTGCTCAATGTCTCAGTAGCTGCGCAAAGTCCGGGAGTTGAACGCACCGGAACTAGTGCTCTTCCGAGAGCGCCTGGCCACTCCCAGAACTACTTTTAGAGAAGATTGCATTAAGGGAGGGGGCCTTGGAAGGTGTTTAAAAGGGGCTTGACTGGGTGGGTCCCTCCAGTGCCTCTACCAGACTCCAGGAGAGAGGGAGGCAGTTCTCACTGAAGTTCCTTGCTCGTCTGGAGGCCCATCCTCACCATGTCTTCGGAGGAGTCTTTTTCTGGACCTGCTCCAGAGTCTCAAGAAGGCCAGAGGCGCAGGAGAACCAAGTACGACAAAAATCAGTCCAAGATTCTTTTTGAGGCTTTCAAAAGTGACGCTTACCCCGATATTAATGTCAGAATGGCTCTGGCTGAGCGAATCAAGGTTCCTGAGCCAAGAATCCAGGTGTGGTTTCAGAACAGAAGAGCTCGAGATCCTCGATCTCGCAAGAACACAAAGGAAAAGGCACGCCCCCCGGTTCCAGAACCCATTCATGGAAGAGTTGGCGCCCCAGTTCCAAGACCCAGTCAGGGTGGACTCTGTGCCCCCAACTGCCCTTGCCAGCAGTGTCTTCTGGCGGCCCAGAAGAATGCCAGTTTATTTTCCTCGAAGCCAGGGAATGCTTCTGATCAAGCTGATTTTGGTGGGTATGTTGGTAACCCGAGCATGAATATGGCCTCGCATAACCTGCCAACTGCAGCTGATGAGCCTTCCGGAGACCTGCGCTACTCTTTCTCCTCGAGCTTCAGCCTCCACTATTTCTCCTCAGGCTTCAACCCCAAAATTCTCAATGCTTCCCAACAGTCCTCTCCACAACTGGAAGCTGGCTGTGCAGAGACTTATGTGGGGGACTCCGAACAGTTCCTGGCTCAAGGGGATGAGCCCCCGCAGGGATACGGGCAATGTCCCCCCTCTGGTGAACAGCAGCCATGGTGGAACTGGCAGCCTTCGCCTGCTCCGAAGCCAGAGATGGAATTCGAGCAGCCACTGTCCCAGAGCCTGGAGGCCGCTGTGCCTCCGTGGTCCTGTTGGTCACTTCCACCTACTCCGGCCTCTTCACCTCCTCAACCCCCTCTGCCCCAGGAGCTGTGTTCCCATCCTGCTTCTTCTCAGCCCTTTCCAAAGAAGGCACGTGCCAATATGAGGAACCTGTTCCATCCCTACCTCTGAGAAAGGACCTTGGTGGGAGGCCCTAGGCACCCCAGCCCTCAGCCATTGCAGCTCTGGGAACAGCACTTAAACTCCTGCTACAACAAAACAGTGGACATAACCTAAGCAAGTGTGAGTCAGGTCACAGATGAAATCAGCTAGGGCTCATCTATACTTTTTAATAGTATGCAAAATTGAAAAAGGATTTGAAGATTTGTGTATTTGTGCTGGAGAGATATAGACATATTTCTAATGAAATGCAGTTGTCAAGATGGAAGGGCATAAAGTGCAGGGGATATGGGCAGGCAGAGGACCTAAGGGGTTTCCTTAGATGGGAGGAAAAGGGATCTTTGGAAGTCCATCTGTCCTGGCTTTTTATCAATATGAATCAATATGATTCACTTGATCAATATGAAGCACTTAAATGTTCTGTAAACCTTAGAAGGGATTGAGGGGTAGGGTGAGGGCTGATTTGTAGAAATAAACTCAATACTCACAGAATGGGATTCACTGTGGCTATTTCTGTGGCCTGGAATGGATCCTCCCTCTTCTCCATGTGCACACTGCCCATTTCCCTTGTCCAGCCAAGTGTGTCTTCCCTCTGAACTTTGAACACATCCCTGCTCCTGGGCAAACAATTTCCTGAAAGCAAGTCCTCCTCCCAACTCATTGTGTATGGCCAAATGCAAACCCCAGTGTAGAATGAATGGGTTTGAGTAGAGAGAGAAGTTGGAAGGTGAATGCAAAATGCATCTCTTCTTTTCAGTTCACACAGTGTAGCCTGGGTCCCTCTGGTACCTACTCATCCATGCCAAGAGGGAGAGGGTGGGAAGCACACCTATGTGGAGGAAATCTGCTTAGCCAGGGGGACTGAACCCTCAAGGTTGGAGAAATTATATAAAGATGCTTCTTGTTCATGTGGCAGACTACCTTCAAGGTTACAGAGTAGCAAAACTTAGCTTTACTCAGTTTATAAATAAGGATCTGGTGTACATCAGAGCTGAACACCAGCAGCCTTAAATTGCTCTGCGCAGTCTGACTTTAAGGAAAACTAGGTGATGAGCACACCCACTCCAGTACTCTTGCCTGGAAAATCCCAAGGATGGAGGAGCCTGGTGGGCTACAGTCCATGTGGTCGCTAAGAGTCAGACACAACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAGATGGCAACCCACTCCAGTGTTTTTGCCTGGAGAATCCCAGGGACAGGGGAGCCTAGTGGGCTGCCATCTATGGGGTTGCACAGAGTCGGACACGACTGAAGTGATTTAGCAGCAGCAGCAGCATCAGGGGTTGAGCACAGGCTGCTGGAATGTCCAATTACATATTTCACCTTCCTTGCTTCCTTGCCATTCTGTGAAGTTAAAGTACCAACACACAGACTGCCAGGAAGGCCTCATGGCCTGAAAAATCTTAAGTTGGATCTACATTGTCAGCACCTTGGGTTTTGACTCCAGACTACTCAGGTTTCATCAGTAGACATCTTTCTAGCCTCAAACCCCCATCCTTCACCCCCATTTTTCTTCCCAAATGGCAGTACCAGGTGAAGAGGGAACGAGAGTACCACCAGATCCTGCTGGAGGGCAGAACACCAGGCTACCCTGTGCCCACAGAGGGTGTCAGGAAACTGCTCCTGTGTGTCTTCATGAGGGGATATGCTGAGTTTCCCAGGTCTGGGGCCCAAAGAGACAGAAGCAGAGCTGCATGGTAGGAGACTGGATGGCTGTCTTCTGTTCAAATGGAGCAGAAGGCTTGGCTGAACTCTGACCTTTATAAGGCTTCTCTCTGGTTCCCTGTCTTTCTGCCCCTATAGTGCCTTACAATGTGTGAAATCCACATTGGAATGGATTAATAAACATTAATTAACCCTTATATTTATCAAGCTGTAGTAAAGAGAGAAGACACTGACTCACGAACTATTTACTCATATATGCCATGGCAAAGCTGGCCATGGAATCTGTATATGCTGATTGGTGAGTGATGGTCTTTCTCTGAAATTAGACTTCAGCATTTCCAAGTTTCTTGTAGGTGGAAAAGAAATAAAAGATGCTGTCTCTTGCTTTTTGTCTCTAGTTTTCTTACATTCTTTGCAGGAAATTTATCCTCAACAAGGGCAAGTTCTTGGGAATTCCTTGGAGGCCCATTTTTTTAGGATTCAGTGCTTTAACTTCCCAGGCCTGGGTTCAATTTCTAGTTAGGGTACTAAAATCCAGCAAGTAACACAGCATGGCCAAAACAAAACCAAAAGCAAAACAAAACAACTGAAAAAACAAAAACAAATGAACAACATGGACAAGGTCTTTGTTTTTGTTGAGTCACTAAGTCGTGTCTGACTCTTTGAGACCCCATGAACTGTAGCATGCCAGACTCCTCTATCCTCCACTATCTCCTGGAGTGTGCTCAAATTCATGTCCATTGAGTCAGTGAACCTATTTAACCATCTCATCCTCTGCTGCCTTTTTGCTTTCAGCCTTTCCTAGCATCAGGGTCTTTTCTAATCAGTCAGCTCTTCACATCAGGTGGCCAAAGTATTGGAACTTTAGCAAGATCTTTAAGAAATCAGTATTTGGAAGGAAATGATTTAGGATATATAACCAGGGATATATAACTATGCTCCTGGTCTTCTCAGATGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCAACTCTGTGCGACCCCATAGATGGCAGCCCACCAGCCTCCGCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGTATGAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCCAACTCTAGTGACCCCATGGACTGCAGCCTACCAGGCTCCTTCATCCATGGGATTTTCTAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGCTTCTCAGATGAGAACTCCGTATCTCCCTTCCTTTCCCCAGGCTCTTGGGTGCTTGCTAAGCAGCTGATCAGAGAAAGCCTGAGGAATAAGGGAAGAGCCTGAGGTAAAACTGAGGTTCAGTTCTGGCCCCACACTCCCTAGATATAGGGACTGGGCAACATTTCTTCTCTTAGAGCCTAGTTTTCTTAATTACCAGGCAACATATGAATGCCTCTCAGGCTAAGATAATGGTTCCAAGCATAAAAATAAACACAGAAAAGAGACTGCTCTGCCATTAATACAAGATAGTTACCATGGACAAAACTCAAAATGCAAATGACATGTTGGAGGAAAAAGTAAGAGCATATATAGTGGCAGGGAAATTAATAAAGTCAGATAACAATGAATGATACCTCTCAAAATAAAAGTGAAAGTCATTCTAAATTAAAAAAAAAAAAAAAGCAAAACTAAAAATAGAATTGCCATGGTTTCCTGCAGTACCACTCCTGGGCATATGTCCAAAGAAAACTTGCACCTCTATGTTCATAGCAGCACTATTTACAATGGCTAAGACATGGGAGCAACTTAAATGTCCATCAATAGAGGAATAAATAAAGAAGATGTGGGGACTTCCCTGGTGATCTAGTAGCCAAGACTGTGCACATAATGCAGGGGCCCAGATTTGATCCTTGGTGAGGGAACTGGGTCCCACATGCCACAACTAAGAGTTCTCATGCTGCAACTAAGACCTGGTGTAGCCAAATAAATAAATATTTTTTTAAAAAAAGATGTGGTACACATATATAATGGAATACTGTGCTGCTGCTGCTAAGTCAC TCONS_00226209 r 5' 24144 TCONS_00226209 r 5' 19285 EMBV3_07400 AGAAGTGGTTTTCAGAAGTCCACATTTGAGAACGGCCGCTTTGTGGGCGATGCTGACCTT Variant GeneID:515187|CTNND1:XM_002693586:52_cdna 247^630 4 EMBV3_28144 GeneID:515187 15 GENE CTNND1 NULL catenin (cadherin-associated protein), delta 1 EMBV3_13375 TGCACAGCGATATGGCCGCGAGCTCCGGAGGATGAGCGACGAGTTTCACGTCTCCTTCAA Gene GeneID:615013|BAD:NM_001035459:110_cdna Constitutive 0 NULL GeneID:615013 29 GENE BAD MGC127164 BCL2-associated agonist of cell death EMBV3_17830 CACCTGGCTGCCCATAACCATCGAGATAGAAGATCGGCGGCACCGAGGACATGCTCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06681 GCATATTGGGCACTTACCGACCTGGGGAGTTCCTCTTTCCCTATACTATCATTTTGCCTT Gene BVV0102_197197 + 0 NULL GK000012.2:52769209-52944768 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158120 TCONS_00071879 TCONS_00029705 TCONS_00166376 TCONS_00178448 TCONS_00202177 TCONS_00090383 TCONS_00239735 TCONS_00174335 TCONS_00011665 TCONS_00175858 TCONS_00081116 TCONS_00247798 TCONS_00247799 TCONS_00230735 TCONS_00230861 15 XLOC_096574 XLOC_043649 XLOC_015964 XLOC_101214 XLOC_108221 XLOC_123822 XLOC_055164 XLOC_146400 XLOC_104585 XLOC_007216 XLOC_105637 XLOC_049996 XLOC_151422 XLOC_140225 XLOC_140351 Coding TCONS_00174335 XLOC_104585 Coding Coding KLF17 3:102520983-102541323 j TSS129403 6974 3 TCONS_00174335_1 398 0.540579294522512 3 0.65725945228379 0 0 4.97597354077309e-07 0 3.46105165346803e-07 1.28228440993569e-07 0 9.78353540995599e-06 2.78653808056652e-05 0.00306888415033957 0.00107703569306409 0.000773970735313882 0.00102450488057076 0.00162375331998782 0.00120470644509537 0.00025741018656973 0.000223267079035698 0.00112078538922182 9.34762638589031e-08 0 1.4146985629957e-07 0.000430550069195244 0.000543839330443734 0.000449900669127168 0 1.26280992657165e-07 2.80046724643093e-06 0.000572593354008371 0.000296200517128514 0.000611778745098819 XM_002686512.3 KLF17 PREDICTED: Bos taurus Kruppel-like factor 17 (KLF17), transcript 0.0 3934 100.00 0.312589618583309 NM_173484.3 KLF17 Homo sapiens Kruppel-like factor 17 (KLF17), mRNA. 0.0 800 75.04 0.168913105821623 TCONS_00174335_1 sp|Q5JT82|KLF17_HUMAN KLF17_HUMAN Krueppel-like factor 17; 8e-149 432 60.57 0.972361809045226 3 coding 0 0 0 0 -0.255670149317608 0.166869545997207 0.0257147581461994 0.69455498336255 GGCTCCGCCCCCCCGCGCGGTGAGAAGTAGAAGCTGAGCGCGGTGATTGTGGCGTGGTAGTACCAGACCTGCGACGCGCCGTGGGTCTCAGCTCTGCTCGGGTGTGGGTCAGGACCCTAGCGCAGGATCAATGTGCAACCCATCCCAAGTTCAAATGGAGCAGGGGGCCGAGGGCCTGAATCAGTGGCATGTGGCTTCGCACCAGTTCACAGAGGATGCTGAGAAGTCAATGTCCATCTTGAACATGTCTTCATCTCCCGGAAGCAGTGGAATGCATACCTCTTGGAACCATAGTCCATTAGACATTCAACACATCCCTCAGTGCACAGAGCTGCAGAGGATCCCCTTGGCTTCTGCTGAGGCACCCAGGCAGAATGCCAGTGAAATGGGGCCACAGTTCAGTATGGCACTGCCTGACCACCGTGTGAGCTACTGCCCCCAACTGACTTTCACCCCTTCCCAGATGACTTTCACTCAAGGAATGTCTCCTTCACAGCCAGGAATGATGATTTTCAAGGAACCCCAGATGATGCCCTTAGGAGAGCCCAATATTCCAGGGATGGCCATGACCTTTGGTGGGAATCTAAGGATGCCCCTTAATGGGCCACCAGCCTCACCTCCCAGTGGAATCCCAATGATGTCCCACATCAGAATGCGAACAATGTCTTATCCTGGCCTCCCAACAGTAGCTTCTAACAGAGACCCTTTACCACCTAAAACATTATTAAATCCAACCGTGCCTTCCACTGAGGCCCAAGCAATGCTCCCTTCTGTGGCTCAGATGTTGCCTCCTAGACAGCCCCACAACTTTGGGATGCCCCCAGGTGGACCTCCATTATTGCTGGCTTTGGAATCCCAGGGCTCTTTTGTGAACCAGCCAGTCTCCCAAGAAGACCCCTTCCTACCTAAGCAGCCCATACCTGCTCCACAAAGAGCAGAGCAGCAGTACTCCAGGACCCAGGAAAAGGCTCCCAAGCGGAGATCCCCAGTTTTAAGGCCTTACCGCTGCAACTATGAGAACTGTGAAAAAGCTTACACTAAGCGCTCCCACCTCGTGAGTCACCAACGCAAACACACAGGTGAACGGCCCTATAAATGCACGTGGGCAGCCTGTACTTGGTCCTTCTTCCGTTCTGATGAACTTGGAAGGCATACTCGGATACACACCAAACATCGACCACATAAATGTGACCAGTGCGGCCGACAGTTCATGAGATCTGACCATCTCAGGCAACACCAAAGGACTCATATGCGGACGCCAAGATCTCCAGACCCACCTGCTGACAATGGATGTATGGCTGGTCCTCCTCCTACTCCTGGTCTTTAGGTCAATCTGCTCATCCCCTCATTTTGGCTTCTCCACCCAGATCCTGCGTGCCTCTGACCAGCTCGTCTCTTTGGTGGGTGTAGGCTCTGATGAAGACACTAAGATTATGAGGCAATGGTGAAGCCCGTATGAGCTCTGGACCCAGTCAGCGCTCCTCAGAAACTGTTGGATGTCCTCTCATCTCTGGGGCCACCTCCTTGTGCCAAGTTCAGCCACATGGGGAAATGGAGCAAAGTAAAGAATGGGAGCTTTAGTCAAAAGCTCTTTATCTTATGTCACTCCCAGCTTGAAACCCTTTAGCGACTCTCCTTTGCCTGCTACACAAAATCCAAGTTCCTTATCTTGGTCTTTGACAGTTTCCAGAGCCAGACTATGTTCAAATCCTGAATTACCACTTACTAGCCATGTGACCTTGGGAAAGGTTTTTGACCATTGTGCCAGGTTTCCTCTTCTGATAAATGAGAAAAACAGTATTGGACTGTTGTGAACACGTCTTATGTACAATATCAAATGCTCTCTGGCACTCGTTAGCCACATATCCAATTTGTCTCCTCCCATCATTTCCAGCCTGGATGAAATGCTCCCCACAGGACATGGGATCTGACATTTCAAGTAGCCCACTAGCAACCCAGGAGTGTGGAAGAGTTAATGCTCCAGGCGTAGTGTTTGACTATTGGGAGTTGGGAGAAATCCAGGCGGATAAATTCCCTCTTCTTCCCTCCCTTCCCTGAACTGGTGCAGGATTTCTCCCAGTGGGGAGACCTCCCTGGAAGCCAGTGCACACAGCTTCTGTGGCTCTTCCAGGCTTGTCATGAAGCAGACTGTGTGCTATCACCTTGCATTACCTCCCATTCTTCCTTACCTTGTGTCCCTTTTCTCATCCTCAATGCCCTGGGTTTTTGTCACCCAAATAAAACATTGATACTTAGTTCATGTTCCAGGCTCTGTTTTCTAGGTGACTCGTGGGTGGAGGACATTAGACTGGGACAGAGAAGGATGAACCCCACTATAATTTCCCCTCTGCCCCCTACCAAGCCCAGGTACTTGGACTCCTAAATATCAGCTATCACAGGGCCTGTTCTGCCCTGGCCCTCCCGTGGCGTTAAGGGCATAATGACTCCCCTGGCAACTCAACCACAGTTAGTTCAGAACCTCATTTCTGTACCTCAGCTGGCTGTTTTACTGACCAGCAAACTAATAGGAACTGGCCTAAATCCTCAAGTAGCAGAGCTGGGATCCCAATCAGGAGCTGTCCACTTCAGAGGTGGATCTCTTACCTTAGAGGTGATATATTCTACAGGTATCTCCTAGGCCCAGCACTTCCAGGAGATGGCCACAGTGAAATGAGTCAGGTCTGGTTCTTGTGGCCCAGGGACCATCTTGATCTAGAAGCTGAGAGGTCCATCTTGGTGCAGTGGCCATGGAGAGGTGGAATACCTGAAGGGGGAAGGTCAAAGGCTTTCTGGAGGAGGTGACCCATGAGCTCAGTAAGCAAGGGTACGTAACATCTAGTAACCCCCTAGTGTTGAAATAAACCCATCAGATGAAAGAAGAGAATTCCAAGCAGAGGGAAGCTGGATCTGGTAATCTGCTCTGAGGACAGTCAACCTGCAAGCTTCCTTTCATTCAACACATGTTCATGAAAGAACCCACAATACAGACAGCACCACGGCTGTGAGGAACAACTCATAGTGAGGGGCACAGAGAAAACGAAAGGATGAGTCAAGGAAGAAAGACTTCTCAAAAGAGGTGCCTGAGTCAGACCTAAAGGGTTTATGGGGGCTAGTTGGGTCTCCCATTTCCTGGATGTCTGCCTTTGATTATGCTCTGTGCTGGACAGTAAGGACTTAGAGAATGACAGTGCCTTGCTGGAGGGCGGAAAGATCATGGACAAAAGTTCTGAAAGTGCTCCATGCTGCCAAGGAGAAGAGTCAAACCTCTGTGGACTCAGATTTCTTCTGGGCATCTGGGGGCATTCTCATGGCCTTGGTTGTGCCTGCCTCTCTCCCTTCCACCCTGACCCTGTCCTGCAGGACACCTTGGTCTGTTTCCTAAGTGACTCACTCATACTTGGGCCTGGCATCCTGGTGGCTTCCACCCCAATTGTGAGCCATGGTAATGGATCTGATTTTTAAAAATTGGGGCAGAGGGCAATCTTTTGTGACCAATTTCTGGCCCCAAGGACAGGAGTCTTAGGTATCCGAAGTCCCTTTGGTTTCCACCTGAGCACTGGGTCCCTTCCATGGAGTGGAACATCCCAGACTTAGTGGGCCAGGGCTGGTCTCTTGGCATCCCTGCTGGTAGGGTCAGCAGGACAGGTTGCTTGTTGAGGTGCAAGAGAGATCTGTTGGTGACCCATCACTTTCACTGAGGAATGGAAGCAGGTAGGAACCAGAGTGGGCAAGAATGTGCCACGTATGCTGCAACGGTGGGAAAAACAGGCCTCCACCCTTGGAGGTCACAGCCTCGTAGAGGAGGGAGGTGGGAAATGTACAGCATGCTGTGAGGACAAGTATCTGAAGATGACTATACTAGGCCAAAGTATTCTTCCCTTGAGAACCCCATGAACAGTATGAAAAGGCAAAATGATAGGACACTGAAAGAGGAACTCCCCAGGTCGGTAGGTGCCCAATATGCTATTGGAGACCAATGGAGAAATAACTCCAGAAAGAATGAAGGGATGGAGCCAAAGCAAAAACAATACCCAGGTGTGGATGTGACTGGTGACAGAAGCAAGGTCCAATGCTGTAAAGAGCAATATTGCATAGGAACCTGGAATGTCAGGTCCATGAATCAAGGCAAATTGGAAGTGGTTGAACAGGAGATGGCAAGAGTGATTTAGTTTGCTAGGAATCAGCGAACTAAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTGTATCTACTACTGTGGGCAGGAATCCCTCAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCCGAAATGCAATACTTGGATGCAATCTCAAAAATGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATATCACACTAATCCAAGCCTATGCCCCAACTAGTAATGCTGAAGAAGCTAAAGTTGAACGGTTCTATGAAGACCTACAAGACCTTTTAGAACTAACACCCAAAAAAGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAATACAGAATGAAGCAGGGCAAAGGCTAATAGAGTTTGGCCAAGAGAATGCACTGGTCATAGCAAACACCCTCTTCCAACAACACAAGAGAAGACTCTACACATGGACATCACCAGATGGCCAACACCGAAATCAGATTGATTATATTCTTTGCAACCAGAGATGGAGAAGCTCTATACATACAGCAGAAACAAGACTGGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTGAAGAAAGTAGGGAAAACCACTATACCATTCAGGTATGACCTAAATCAAATCCCTTATGATTATACAGTGGAAGTGAGAAATAGATTTAAGGGACTAGATCTGATAGATAGAGTGCCTGATGAACTATGGACGGAGGTTCGTGACACTGTACAGGAGACAGGGATCAAGACCACCCCCACAGGGAAAAAATGCAAAAAAGCAAAATGGCTGTCTGGGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGCAAAAAGCAAAGGAGAAAAGGAAAGATATAAACATCTGAATGCAGAGTTCCAAAGAATAGCAAGAAGAGATAAGAAAGCCTTCCTCAGTGATCAGGGTAAAGAAATAGAGGAAAACAACAGAATGGGAAAGACTAGAGATCTCTTCAAGAAAATTATAGATACATTTCATGCATAGGGAACATTTCATGCAAAGATGGGCTTGATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGTCAAGAATACACAGAAGAACTGTACAAAATAGATCTTCACCACCCAGATGATCACGATGGTGTGATCACTTACCTAGAGCTAGACATCCTGGAATGTGAAGTCAAGCGGGCATTAGAAAGCATCACTATGAACAAAACTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTTCAAATCCTGAAAGATGATGCTGTCAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCAGGAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAGTCCCCAAAAAAGGCAATGCCAAAGAATGCTTAAACTACCGCACAATTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATACATGAACTGTGAACTTCCAGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATCCACTGGATCATGGAAAAAGCAAGAGAGTTCCAGGAAAACATCTATTTCTGCTTTGACTATGCCAAAGCCTTTGACTGTGTGGATCACAATAAACTGTGGAAAATTCTTCAAGAGTTGGGAATACCAGGCCACCTGACCTGCCTCTTGAGAAACCTCTATGCAGGTCAGGAAGCAATAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTATCACCCTGCTTATTTAACTTTTGTGCAGAGTACATCATTGGAAACGCTGGACTGGAACAAACACAAGCTGGAATCAAGATTGCTGGGAGAAAGATCAATAATCTCAGATATGCACATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTCAAAAGCCTCTTGATGAAAGTTAAAGTAGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCTGGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGTCAGACTTTATTTTTTGGGGCTCTAAAATCACTGCAGATGGTGACTGCAGCATGAAACTAAAAGATGCTTACTCCTTGGAAGTAAAGTTATGACCAACCTAGATAGCATATTGAAAAGCAGAGATATTACTTTGCCAACAAAGGTCCATCTAGTCAAGGCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGATTGTAAAGAAAGCTGAGCGCTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAAACAGTCCATTCTGAAGGAGATCAGTCCTGGGTGTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGCCACCTCACGTGAAGAGTTGACTCATTGGAAAAGACTGTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGTCTGGATGGCATTACTGACTCGATGGACGTGAGTTTGAGTGAATTCCGGGAGTTGATGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTGACAAACAGCCAGACACGACTGAGAGACTGAACTGAACTGAACTGAACTGAAGCTTCTTTAAAGTTTTATTGTCTTAATAAAATTTGGAAAAAATTTGGC EMBV3_05494 GACCTTATTATCTGTCCTTTGGGAAGTGTGTGGATGGTGATACACCTCAGGGCTTATCCC Gene GeneID:100301342|LOC100301342:XM_002698178:686_cdna Constitutive 0 NULL GeneID:100301342 25 GENE LOC100301342 NULL similar to autism susceptibility candidate 2 EMBV3_20733 TGAGTGACCTCATGGGATCTCACTGCTCCCTGCAATTGGCCCTAATGAAACACTTCTCAC Gene BVV0102_221046 + 0 NULL GK000019.2:26870524-26948076 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21063 AACCATGACCACGACATCATGCTTCTGGAACTGAAGTCCTCTGTGCAGCTCACCAGGCAC Gene GeneID:540297|KLK13:XM_002695143:686_cdna Constitutive 0 NULL GeneID:540297 18 GENE KLK13 NULL kallikrein-related peptidase 13 EMBV3_19162 GATAAGGTTGGTTATAAAGAATGTGTCTTCTGAGTCACTGCAGTCTACTAGTACAGCAGG Gene BVT0102_107745 + 0 NULL GK000025.2:18562176-18566251 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146449 TCONS_00146448 1 XLOC_089105 Coding TCONS_00146449 XLOC_089105 Coding Coding THUMPD1 25:18562895-18570698 = TSS109486 4748 1 TCONS_00146449_2 357 0.490311710193766 4 0.391950781850807 1.23541097763827e-06 0.000476828282523241 0.000719358956384488 0.0006728706521131 0.00113178042902345 8.53464241580524e-05 1.32051915841851e-06 0.00126045161461766 0.00118958431961504 2.01216155206216e-08 0.000120957813513649 2.8080644261357e-07 8.93539178818251e-05 0.000225423421756883 4.76478315118467e-08 0.00827791887985989 0.00483625166667322 0.0107217672399339 0.000373099238978896 0.000788154868483977 0.000265070044279607 0.00029812681808913 0.00111806811309233 0.00116192592996562 0.00119502204843645 7.55541715556927e-05 0.00123202577529521 0.000407777806413657 0.000352609615090555 0.000595909722576184 XM_005224743.1 THUMPD1 PREDICTED: Bos taurus THUMP domain containing 1 (THUMPD1), 0.0 6650 99.92 0.777590564448189 NM_017736.3 THUMPD1 Homo sapiens THUMP domain containing 1 (THUMPD1), mRNA. 0.0 1568 80.64 0.344776748104465 TCONS_00146449_2 sp|Q24K03|THUM1_BOVIN THUM1_BOVIN THUMP domain-containing protein 1; 0.0 738 100.00 0.997198879551821 1 coding 0 1 1 1 1.89262323704488 0.0377797345236783 0.0446303040103546 0.384388361558423 GAGGGGCGAGCCTCACGCCATCGCGCCACAGCCCTCCGCCGTTTAGTACCGGCATTAGGACCCGGCGTAGCACGGAATGAGGCTCGGGGGAGGGACTAGGGGACGTCTTTGCGCTCAGTGACGTAATCATCCCGCGCCAGCAGCGACCAGGGCTGTGGAGAAACACGTTTCTGGCGGGCCTCACCTCTAACCTACCATGGCGGCCCGTATACAGCAGTCTCCTCAGCCTGGCGGCGGGAAGCGTAAAGGCAAGGCTCAGTATGTGCAGGCCAAGCGGGCTCGGCGCTGGGATGGCGGTGGGCCCCGCCAGCTCGAGCCCGGGATACAGGGCATTCTCATCACCTGTAACATGAACGAGCGAAAGTGCGTGGAGGAGGCCTATAGCCTGCTCAACGAATACGGCGACGACATGTATGGACCAGAAAAGTTTGCAGACAAGGATCAACAACCCTCTGGAAGTGAGGGAGAAGACGATGATGTGGAAGCTGCCTTGAAGAAAGAAGTTGGTGACATTAAGGCATCCACTGAGATGAGGCTAAGAAGATTCCAGTCAGTGGAGAGTGGAGCAAATAATGTAGTCTTCATCAGGACACTTGGGATAGAACCTGAGAAATTGGTGCATCATATTCTCCAAGATATATACAAAACCAAGAAGAAGAAGACTCGGGTTATTCTACGAATGTTGCCCATCTCAGGCACATGCAAGGCTTTCTTAGAAGATATGAAAAAATATGCAGAAACATTTTTGGAACCATGGTTTAAAGCTCCAAACAAAGGAACATTTCAGATTGTATACAAATCTCGGAATAACAGTCATATGAATAGAGAAGAAGTTATCAAAGAATTGGCAGGAATAGTAGGCAGCCTTAATTCAGAAAATAAAGTGGATCTTAGCAATCCACAGTACACAGTGGTAGTAGAAATCATTAAAGCTGTCTGTTGCCTGAGTGTTGTGAAAGATTACATGTTGTTCAGAAAATACAATCTCCAGGAGGTGGTGAAGAGTGCTAAGGACTTGTCACAGCTTAACCCAAAGCAAGCAGCACAAACAGGAAATGGGAAAGAAGCTAAATTGGAATCTGGTGACAAATCAAGTCAAAATGACCCAGCAGAAGGAAAAAATAACCAACAAGTGGTACCAGAGAACAGTGAGGAGCTGGGTCCAACAGAATCAATATCTGAGACACATGTGGTGAATGAGGGGGTGGCTAAACCTGAACTTGCAAGTCAAGTCACAGAAGGATCTGAATCAAATGAAAATGATCTCTGATAGGAAAAGAAATTGTTTGGTGTTGGAGGTAGATGTTTCTTTTTTTTTTTGGAGGTGGATTTTTCAACTGGAGTTTTGTGAGATGTTGCTGGGATTCCATATAAAATTGTGACTAAAAATACTGTTTTTGATATTGTGTTCTCCATAATTTACTCACAGTAGTGGAGCAGCTCTGTTAATAGTTTTGTTAGAGGTCTTTCAGCCATATATGGCAGTGTGCAGTAGGCCCACGTGCATTTGGTTGGCTTAGAACAGACTTTGGATAAATTGGTGAACACTATTGCAGAGAGCAGAGGGTGGTAGGGGAATGATGTTGGCCTCTCCTTCATGATTACCTTCCCCACTATCCCCTTCTGCACTACCAGCTGACTTACAGGAATGAACAGGCTCTGTGAAATCAAAACTCAAGAGGGAAATTTCCATTCTAAGAAAGGAATTTTTGTGTATTGCAACTCAGTTGTCCCCTGCCGCTTTGTTGTAAACATTGGACAAACATGGGTTGTATAGGTTAGAAGTGAATTGTTTTGTGAATTTTTTTACTTTTGGGGATTTTTCTTGTTTTGTTTTTATCCACTCCTCACCCCTCTTTTTTTTGACAGTACCATAGGGCATGTGGGATCTTAGTTCCCAGACCAGGGATCCTACCCATAGCCCCTACAATGGAAGTTATGCTCATTTTTATGTTTTAATAACATTTGTTACAAACAGATCTGATGGTGCAGTGGTGCAGTTTTTGAAGGCAAGTTTTGAAAGAAAAATGTTCCATTCTAGGCATAGAATTACAGACATTTCTGATAAGGTTGGTTATAAAGAATGTGTCTTCTGAGTCACTGCAGTCTACTAGTACAGCAGGGACTCAAATGCTTTATACTGTAAGCTACTTTACAATGTACAGGGATATATAATCCAGGCTGTTCCATTGTATATCCTTTGTGAAATGCAACTTACAAACTGAACATTTGTTTTAGCAGTTGTAACTATAAAGCATAGCCCGTTGACAAATAAAGATTATTTTAATGGCGTTGGAATACCAGAACAGTAAACCTTTTGTTCAAAAAAACCACATTGAATGAAAAGGTTTAGAAAGCAAATTATTTAGTGGTAGAATTTTTTCCAGAAAAGAAAAATTCGAATAATTGATAAGAATCTAATAATACCAACATTTAGCTAGATCAAGGAGTACAAGAAATTGAAGACTTTACTGTCAGTATAATAAATTGACTTACGTGATGCTAAAGAGGTTTTGTATAAAAGCAGCAGCTTCTCTGTGTGAGCTGATGAATCAACAGATTTCATGAATATTTGTCATGCTGTAGCATTTGTAGGATTTGTAAATGATCAGGAAATTCAAGAAAACTAAGTTACTAAAGTCTCTCCAAACAGTGGTCAATAAAATTTAGTAGGTCTTCATATCTGAAAACCCAGTGATCTGTCATCTGTACTCCCTAGTGCCCCATCAGTGGCTGGCTCCATGACAAATTCTGCATCACTTTATTAAAAGAATATCCTATGACTTTGGTAATTACAGCACATTGCTTTCTTCACAGTGTGAAGAAAAAGCTTGGAGTTGAAGAAAGTTCTAAATAATGCTACAAAAGTGGTTAATTAAAGATACATTTATGTGTTTAAAACAAAAGAACCAACTAAAACCTGAATGAAGAGCATGTAAATCTCTTACATACAGAAATCCAATGCTTATCTGAGGAAGAGTTAGCCACAGGATATTTGAGCTGAAAGGTGAATTACCAGTAAGTTCTAAGTACAAGAAAACACTAGGCCAGATTTTGCTAAATGCTTTGAAGATGAAGAATGGTCTCATTAGACATTTTTTCATTGCAAGAACAAATGAGCTGTTTTTATGAGGGCCTGGAGAAAAATATTTTTTTCTTTAAAGTGACAGGAGTCTTGGATTAAAAGAAACTGACTCTTTGGAATAATTATGTTGAATAAGGCACTCTTGGTTTCCACAGACACTTGGATTTGAAAAAGAAGAAAGCAACGTCTCAAGCCTTATTTAAACTCTCCTTGAAGAATTGCAAAACCAAATTAAATAGCATTTCCCCTCCTTTTCCCAACACTATGTGACTGGGTGAGGAACCCTTTCTCAAAATCTCAGCTTGAGATTTTGTCATTGAGAGAATAAGAAGAACTGAGAGTCCTATTCTCACGGTTGTGAATTTCTGTGAAACATGAGTATCCTTCAACTTGGTGCTGACACACGCAATACTTTGAAAGTTTTTTCAGGGGTTCCTCCAGGGTAAAACTGAAAAAAGAAGAGAGATAACAAAGAGGATTGCAAAATAAAATAATTGAGAATACTGAGGGGTTGTGAAATTAGCTTTTGGAGTTGGATTTATTTTTTAACAAGTTTGGCAGTATAAATGTTAAGTCTTGCACCAATGGCTGTAGTTGTTTATTGGCTAGTGAACATGGAAATAATTTTTATCCTTCTAATGATTCTGGTTAATTCTTCAAACCAGAAGAATTTGGGATGGGGCAAAGAGAATAGCTTCCCAAGTGGCTCAGTGACAAAGAATCCACCTGCCAATGCAGGAGGCACAGTAGACGCCAGGTTCAATCCCTGGGTCAGGAATATCCCCTGGAGAAGGAAATGGCGAATCACGCTAGTATTCTTGCCTGGAGAATTCCATGGACTGGGGAGCCTGGTGGGCTATGGTCCATGGGATTGCAAAGAGTCAGAGGTGAATGAACAGGCCAACCCCTGCTGTGTGAATAGAAAGGACCTTGCTAATGCAGATGAGGCTGGCGCTTCCTTATATATCTTTAGAATGTTAACTCTTAATAAGTTGAAGTTATCTTGAAAGGATGATAAAAGCATTCTAAGTATCACTGGGGGAATGTGAATAATAGGATTTTGGTGCCTTCAGACTTTCCAAGACAAAGATACTTTTATTTTGGTAGTACAAGACTTGGGGAATAAAATTGGCTGTAGGCATACAATTGTATGGAACTAGGTTCGTTTTATTTTGTGAAAGCTGCTACTCTACATAAAGATTTTGATGTAGTAGTTTGTTGTAATCCCCTTCTACATTTGTATTTGGTAAGGCCTAAGTGTGACAAAAGCTCTTCTGCAAATACGAGGTAGTACCGTGTTCTGTTGGAATCTGAGTTCGTTCATTGAGAGATTTATTTTCAAGTTTACCAATTGTTTATTTCCACTAACGTTTGAGCAGATTATTTTATATATGATGGGATTCCAGGGTGGGAATGGAGTGCTTTTTCTCTTTTAATTTTTATTTTAAAAAATTAGTTAAACTCCAGTGTTGTGGTTTAGTAAACTTGTTTTGCTTTATGGAGGAAAGTGTTAAATTTGATATTTTAAAACATATTTCTCTATGATTAAATATGATTTCTGAATGTTGTTTTTACTTGTATTTTGCTTTTGATATGGCCAGGTATTCAGCTTTTTTTTTTGATAGTTCCTAATGTTTTCAGAAAAATAAAATTAGTTCCCTAA EMBV3_31189 TTACCACCTGACAGAAACAGGCAAGACCTGGATCGAAGGGGAAGAATGGTGTTTGCCAGA Gene GeneID:100298362|LOC100298362:XM_002683758:7_cdna Constitutive 0 NULL GeneID:100298362 15 GENE LOC100298362 NULL similar to kelch-like 26 EMBV3_25742 CTGGACAATGCTGAAGAGCTAACCAGCAAAATGCATGTACCCCAATGTTTAAGACAGCAC Gene BVT0102_096387 - 1 EMBV3_05930 GK000030.2:135503511-135804045 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36726 TTCCAATCTGAATAGACAATTTTTATTTAGAATTTCATATAATTGTATGTGGACTGGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00714 ACTGTGGGTATGGAGACAGTGCTGCAAAAGGCGGAGATGGTCCACACAGGTCTGAAGTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32821 TAGCAGTCCAAGAGCTCAAAGTGGGCAGGACATGCTCGGGGTCAGCGTTTTAACCAATGT Gene GeneID:512244|ZSWIM3:XM_002692345:159_cdna Constitutive 0 NULL GeneID:512244 13 GENE ZSWIM3 NULL zinc finger, SWIM-type containing 3 EMBV3_28181 TGTCTTCACAGAGAGGCACAAGGGTCTCATGGAGAGGGCTCAAGCAGGGATGGGAGATAT Gene BVT0102_207918 + 1 EMBV3_36410 GK000019.2:37985161-37985584 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093629 TCONS_00096672 TCONS_00093627 TCONS_00093628 2 XLOC_057198 XLOC_058029 Coding TCONS_00093628 XLOC_057198 Coding Coding PHOSPHO1 19:37978509-37985670 j TSS70179 2323 2 TCONS_00093628_2 249 3 0.675977653631285 6.55051458744806e-08 2.54624192766748e-09 8.73156939434705e-05 0 1.94110987024806e-45 2.16765257827515e-13 2.42906691938009e-05 1.02991887245906e-10 1.82467381624541e-09 0.000906564120418622 7.96060068305074e-06 3.77910898957977e-05 1.55498578788844e-24 0 6.20373601529862e-21 0.000379578726813652 3.49530381862614e-08 0.00299606179959803 1.76125899665483e-09 4.75462857576319e-15 3.32551199909006e-10 0.00195079590542079 0.00299847511071281 0.00490017055171949 8.01279324652767e-09 2.91649856966181e-05 0.000588253470512868 0.00237015070258286 0.00176512310995805 9.96430051897478e-08 NM_001193119.1 PHOSPHO1 Bos taurus phosphatase, orphan 1 (PHOSPHO1), mRNA. 0.0 2807 100.00 0.669393026259148 XM_005257107.1 PHOSPHO1 PREDICTED: Homo sapiens phosphatase, orphan 1 (PHOSPHO1), 0.0 1478 80.34 0.707705553164012 TCONS_00093628_2 sp|Q8TCT1|PHOP1_HUMAN PHOP1_HUMAN Phosphoethanolamine/phosphocholine phosphatase; 5e-174 485 92.37 0.995983935742972 2 coding 1 1 1 1 0.0354412042516176 0.788346315406266 -0.0220292313810743 0.745511275748605 TTTAAAGGGGACGCGGCGGCGGCCTGGGGGGATGGGGGGCAAGTGGAGGGGACGGCCCAGACGCATATCATCCACGGCCCCTCCGGACTGGAGGGACTCGTGAGAGCCGAAGCCCAGAAATCCGGGGGTGGATAAGACACCGCATCCCCTCCAATTCCCCCTGCTGGAAAAGCTCAGAGGTCCTGTCCCCCTTTCCTCTGAGGGACTGTATTTGGTGACCACAAGAGGATTCAATCACTCAGGAGAAAGTTTCCAGAGGACGGCGGGATGGCTGCGCAGGGCTCGCCGCGCTTCCTCCTGACCTTCGACTTTGATGAGACTATCGTGGACGAAAACAGCGACGACTCGATCGTGCGCGCAGCGCCGGGCCAGCGGCTCCCGGAAAGCCTGCGTGCCACCTACCGCGAGGGCTTCTACAACGAGTACATGCAGCGCGTCTTCCAGTACCTGGGCGACCAGGGCGTGCGGCCGCGAGACCTGCGCGCCGTCTACGAGTCCATCCCGCTGTCGCCCGGCATGGGCGAGCTGCTGCAGTTTGTGGCCAAGCAGGGTTCCTGCTTTGAGGTTATTCTCATTTCAGACGCCAACACCTTTGGCGTGGAGAGCGCGCTGCGCGCCGCCGGCCACCAAGGCCTGTTCCGCCGCATCTTCAGCAACCCTTCCGGGCCCGACGCTCGGGGGCTGCTGGCGCTGCGGCCCTTCCACTCACACAGCTGCGCGCGCTGCCCCGCCAACATGTGCAAGCACAAGGTGCTCAGCGACTACCTGCGCGAGCGGGCCCACGACGGCGTGCACTTCGAGCGCCTTTTCTACGTGGGCGACGGCGCCAACGACTTCTGTCCCGTGGGGCTGCTGGCCGGCGGCGATGTGGCCTTCCCTCGCCGCGGCTACCCCATGCACCGCCTTATCCAGGAGGCACAGAAGGCTGAGCCCAGCTCCTTCCGCGCCAGCGTGGTACCCTGGGAAAATGCCATCGAAGTGCGCCTCCATCTGCAACAGGTGCTGAAGACGTGCTGAGGACGCGGCCTGCAGGGGGCGCCTGGCGGGAAGGGGGCCAGGGGGCTGGGGACAGGGAAAGACAAACCTAGTTTTATTATTCCCTTTCCCTTTCGTTTTGATGGGTCCCTCCGGGAATTTCCGGAATCCGGAGCTCGTCCATTTGGGGGCTGGAGGAGAGAGTTCGGAGCTGTCCCCATCTATGCAGTTAACCCAGCTTGGCTGTCTCCCCCAGTTCCGCTGCAAGCGAATTCTGGAGTTTGGCCCCGCCAGGGTGGTGCGCAGACCCACGCAGGCAGCAGTGTTTTCCAAAAACCTTGCCCCCTCCCAACTGGGAGGAAAGGGTTGCCTGGCAGGGTAGAGAAGGAACATCTCCCACTGTGTTTCATTAACTGTTGCCTTGGGCCGCATGACTTCCTTCCCCTAGACTTCTGTCAGGGGTACACAGGTCCTGAAATTCCTCCCCCCGTCCCTTCAGCCCTGGACTCCCCGCGGAGAGATGGTGCTCTCCACGGACGCCATTCTCAGGCCTAGGTCTTGCTTTATCTTCTGTGACCCTACACTACACTCCTGCCTCCCCCCACGCACGCTGTCAGCGTTCCCACAGGAAGAAATGCCAGAGGGAACAATCGCCTCCTGGTGGTGGGATGAGGTAGCACACTGTCCAGGGCTCGGGTCCGGCCAGCCAGGGACCTCAGAGAACGCGACGACGTCTCCTCCTCGCACCCCAGCCTCTTCTATGCAGCAAGAAACCAGGGACTTAACCAAAGTCGCCCCGCCGACTGGACTCTCTGAACCCCTCCCCTCCCGTATGGAACAGAAAGCCATGATGTTTTAAAGCAGGGCCACTGAAACCCAACCCCCTCCTCTTTTGGTGTTTCAGAGCTATAAAGGAGGTAAAGGGGCAGAGGTGACTGAGATCTCTCGCGCCGCAGTCTGAGGGATGAGGATGAGATGATCTCTCAGAAAGCCCCACTTAAGTGAGGGAGCTGGACCCCACTCTTGGAGGAATGTCCAGTTTGGGGAACCAAGTGAATTCATAAAGCAAGGAACAGGCAAAAGAGCAGGGTGCAGCCTGTCTTCACAGAGAGGCACAAGGGTCTCATGGAGAGGGCTCAAGCAGGGATGGGAGATATTCCTGCTTAGGGCAGGCAAAGGGACTCAGTCAGCAGGAGCCTAAAAACCGGGTTACCTTTCAATCTTTCAGCACACCCCGCACCCCACCCTGCAGGGCAATCATCAAGAGGTCACCAGTTTTATTCCAAGTTGGCACTTGCAGCTGGAGACCCTGTCTTGCATGGTCCAAGGGTCTCCTGTGGATAAGATC EMBV3_15117 AAACCTTGAGAGTTTTCCAGCCTGCTGCTCCAGGAACCTATCGCATCTACACCTACACCA Gene GeneID:100140621|LOC100140621:XM_002697111:22_cdna Constitutive 0 NULL GeneID:100140621 22 GENE LOC100140621 NULL similar to testis specific serine protease 4 EMBV3_31667 GCATGCCCTGGCCCTGCATTCAGAGAATTATGGTTTAGAGTCTCACTGGAATCTGAGAGT Gene GeneID:785711|VPRBP:XM_002697028:461_cdna Constitutive 0 NULL GeneID:785711 22 GENE VPRBP NULL Vpr (HIV-1) binding protein EMBV3_43531 AGAAGACGGAAAATGGGGCGTCGGCATGAGCCCCCAGCCTTCTCATGCCGCACCTACATC Variant GeneID:613777|PTMS:NM_001104999:73_cdna 268^400 1 EMBV3_20840 GeneID:613777 5 GENE PTMS NULL parathymosin EMBV3_12994 TGTGCCTTCTCATGGTGGGCATCTGTGCAGCCTATGGTGTAGTGGGTGGTCTATCCTATA Gene GeneID:614021|LOC614021:XM_002686522:708_cdna Constitutive 0 NULL GeneID:614021 3 GENE LOC614021 NULL similar to olfactory receptor Olr856 EMBV3_40822 CAGGCTGTATCACAACACCAGGGACTGCTCGACGCCAGCTTATTACAAAAGATGTGCTAG Gene GeneID:100297122|LOC100297122:XM_002692663:113_cdna Constitutive 0 NULL GeneID:100297122 14 GENE LOC100297122 NULL hypothetical protein LOC100297122 EMBV3_20410 TGGACCTACATGACATCCATGACCTCACCGTTCTGGATCAGGCCAAGCTATCAGCTGTGT Gene GeneID:100336454|LOC100336454:XM_002698947:53_cdna Constitutive 0 NULL GeneID:100336454 28 GENE LOC100336454 NULL hypothetical protein LOC100336454 EMBV3_27552 AGCAGTGATGGAATCTGCTGGAGAAGGAGGTCTCTCCATTGCTGTTGTACTTTGGGGCTC Gene GeneID:616311|PMF1:NM_001038212:221_cdna Constitutive 1 NULL GeneID:616311 3 GENE PMF1 MGC134238 polyamine-modulated factor 1 EMBV3_35714 TTGAGTGAAGGCCTCTCTAGGACAACCAAGGCTCCTCCGCATCCCAGTGAGCAGGTAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10056 CAGACTGTGCTGCTACTGTGTTACTTCACTACCTGGTGTCCCGTTGCTCAGGATCTTGTG Gene GeneID:504966|TMEM184C:NM_001075180:1_cdna Constitutive 0 NULL GeneID:504966 17 GENE TMEM184C MGC139883 TMEM34 transmembrane protein 184C EMBV3_09585 CGGAGGCCGACGGGAGGCTGCGGCCGAAGAGTCACCAATCTGCAAGCACATCTGAAGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27034 ACTCTCAGCTTGAGGCAGAACTAAGCACATTTCAACAGGGGAATCCATGCTTCATGCCGC Gene GeneID:618831|LOC618831:XM_002690556:138_cdna Constitutive 0 NULL GeneID:618831 10 GENE LOC618831 NULL similar to TRD@ protein EMBV3_41975 GGACACTGTCTCCAACGTGGACTACTTCTTCAACTTTAAGGCACTGGACGAGGAGCCGCT Gene GeneID:616551|PRR22:XM_002688887:133_cdna Constitutive 0 NULL GeneID:616551 7 GENE PRR22 NULL proline rich 22 EMBV3_15750 TGGGCCAGATCCGGTACTCTGCGACTTTCTATCTTTAAATGGATGAGATGGCTACCACTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14078 CATAGTCTTGTGGCTTCAGCTTGGATGGTTGAGTGATGAAGACCAAGTGGAGCAGAGTCC Gene GeneID:100336128|LOC100336128:XM_002690602:66_cdna Constitutive 0 NULL GeneID:100336128 10 GENE LOC100336128 NULL hCG1812119-like EMBV3_22633 TCCAAGAACAGAAAGAACTTGGAGGGAAAGGTGATCAAGAGGAAGCAGGTCAAGAGGAGC Gene GeneID:281538|TNP2:NM_174200:33_cdna Constitutive 0 NULL GeneID:281538 25 GENE TNP2 NULL transition protein 2 (during histone to protamine replacement) EMBV3_23173 GTATCTGCTGGTTGGTGACAGCGTGGTGCTGAAGCAGGACTCCATCTACTATGAACACTT Gene GeneID:514810|KDELC1:NM_001075685:14_cdna Constitutive 0 NULL GeneID:514810 12 GENE KDELC1 MGC139302 KDEL (Lys-Asp-Glu-Leu) containing 1 EMBV3_30829 GAATCTTGTTTCTAACAAGCTCCTGGACCGCCGCGCTGAGGCTCACACTGTCCCTGGCAA Gene GeneID:538515|MGC143103:NM_001083488:250_cdna Constitutive 0 NULL GeneID:538515 22 GENE MGC143103 NULL hypothetical LOC538515 EMBV3_31874 AAGTTTCAGTGTACGAAAATGACTATCAGCCTGAGCCCCTGACGGTGGAGATCCAGATCC Gene GeneID:784978|LRRC43:XM_002694571:621_cdna Constitutive 0 NULL GeneID:784978 17 GENE LRRC43 NULL leucine rich repeat containing 43 EMBV3_24637 TGCTTTCCTGGCAGCTGATGCTTCTCCTTTGTGCCACCGCCTTCAGGGAGACACTGGAAA Gene GeneID:615613|KISS1:XM_002693903:245_cdna Constitutive 0 NULL GeneID:615613 16 GENE KISS1 NULL KiSS-1 metastasis-suppressor EMBV3_25482 ACACTCGCTCAACATACAGAATGACTCCGGTGAGTTCGTGGACCCTTATGTGCCGCAGAA Gene GeneID:524703|LOC524703:XM_002691415:394_cdna Constitutive 0 NULL GeneID:524703 11 GENE LOC524703 NULL similar to ribosomal protein S21 EMBV3_00878 CATCTTGTCCACGGCAAATGCTGGCCCCAACACAAATGGTTCCCAGTTTTTCACCTGCAC Gene GeneID:613401|PPIA:XM_002686712:53_cdna Constitutive 0 NULL GeneID:613401 4 GENE PPIA NULL similar to peptidyl-Pro cis trans isomerase EMBV3_43072 ATTTGGACAGCCCACCTGAATATAACATTTCAGGGAACGGAAAATATAGTTGCTGTGATG Variant GeneID:538888|RNF148:NM_001080736:52_cdna 301^594 1 EMBV3_35514 GeneID:538888 4 GENE RNF148 NULL ring finger protein 148 EMBV3_03678 CCACCTTGATGCGTGCCCACAGTATTTGATGCGTTTTATACCTATGGAGACCTTAGGCGT Control NULL NULL 0 EMBV3_32062 NULL NULL NULL NULL NULL NULL EMBV3_41547 GTTACTGCAGCTGGATGGAAGCAAACTGAAGAGTCTGGGGCTCAGCAACTCGCATGATCG Gene GeneID:785513|SAMD14:NM_001105018:192_cdna Constitutive 0 NULL GeneID:785513 19 GENE SAMD14 MGC155069 sterile alpha motif domain containing 14 EMBV3_32532 AACATTAAAATTTCCCACCTGGTTATCAGTTTTGTCCTGTTACTAACTTGCATCCATCAG Gene BVV0101_022800 + 0 NULL GK000001.2:72916926-72935260 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03957 GGAGAGATGACTTTCCTTATTGGTCAGGGTTCTTACAGCCTGAATGCAAGGGATGGCTGC Gene GeneID:617071|LOC617071:XM_002690603:75_cdna Constitutive 0 NULL GeneID:617071 10 GENE LOC617071 NULL similar to TRD@ protein EMBV3_24063 TCTCACGCCCTCAGCCCTTTATCCCTGCCTCCGAACCTTCTAGTTGAGCTGGTATTTGTT Gene GeneID:317694|TIMP4:NM_001045871:10_cdna Constitutive 0 NULL GeneID:317694 22 GENE TIMP4 MGC137544 TIMP metallopeptidase inhibitor 4 EMBV3_11871 GCCTTGGATACCAGCTATTGGACTGTCATTAACCATGTCTTCATCTGGGGCAGCATAGCC Gene GeneID:100137953|ATP8B4:XM_002690973:367_cdna Constitutive 0 NULL GeneID:100137953 10 GENE ATP8B4 NULL ATPase, class I, type 8B, member 4 EMBV3_01650 GAACCACTCGAGAGACTTCAGCACAGAGGCCGATAAAAGGGCCACGAAAATGGTGACAAC Gene GeneID:664647|T2R65A:NM_001046634:20_cdna Constitutive 0 NULL GeneID:664647 5 GENE T2R65A NULL bitter taste receptor Bota-T2R65A EMBV3_38272 CGACGGCGGCGGTGGCCGCAGCCCAGGAAGTGGCTACTAAATGCTTGGTGATGAAGGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08093 GTGGTGACCCCAGAACAGATTGAAGAGGCCGAGAGGCTCGGGCTGCACTCAAGTGGGCAG Variant GeneID:514586|EPRS:NM_001034468:163_cdna 399^474 2 EMBV3_00610 GeneID:514586 22 GENE EPRS EPRS MGC128695 glutamyl-prolyl-tRNA synthetase EMBV3_25799 TCGTTCAAATGAAGATCGCTTTTGTACTTCCTGTGGACATGTAGTAATGTCTATATTGGC Gene GeneID:613629|SIRT1:XM_002698855:429_cdna Constitutive 2 NULL GeneID:613629 28 GENE SIRT1 NULL sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) EMBV3_04927 AGAGCTGCTTCACATATAAATGTCTATAGCTTATAGCCCAGCCCTTCAATGTATAATTTG Gene GeneID:512265|HERPUD2:NM_001075558:48_cdna Constitutive 1 NULL GeneID:512265 4 GENE HERPUD2 MGC140609 HERPUD family member 2 EMBV3_23781 TTTTGTACCGGAAGATGTGGTGGTGACAGCTGCTGGGCTCGTGGTGGTCAGTGACCTGGT Gene GeneID:618053|LOC618053:XM_002697967:694_cdna Constitutive 0 NULL GeneID:618053 25 GENE LOC618053 NULL similar to zinc finger protein 750 EMBV3_10630 GAGGGCTCCCGCCAAGCTCTGGCCCTCCAGTCCCTAGGTTGTGTGCTATATGCCATGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33201 TGCTGTGAAGCAGTCATGGCTTGCATACCCTCATTATACACCTCCAGAGAAATGCCCCTC Gene GeneID:100125835|PCYOX1:NM_001105474:2_cdna Constitutive 2 NULL GeneID:100125835 11 GENE PCYOX1 MGC157353 prenylcysteine oxidase 1 EMBV3_01430 GACCAAAGATGAACATCTTAACAAAGACCGGAAGCAATGAAGCAGCTAACCCAGCTCCTC Variant GeneID:509282|HDDC2:NM_001075401:9_cdna 237^339 1 EMBV3_27560 GeneID:509282 9 GENE HDDC2 MGC143232 HD domain containing 2 EMBV3_38425 GCGCGGCCAGGAGCGAGGATGCAGTGTCTGGCTTTTGGTTTTCAGTTCCACTGTTGTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27212 CCCTCCCCTTATTCTTGCCTTATACATTCCCTTAACTGATAATCATAAGAAGCCAACTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40376 CGGGACTTTGCTGGCCCCTACTTTGTGTCGGAAGACAACATGGCCTTTGGGAAGCCTGCC Variant GeneID:614627|TMEM222:NM_001035451:272_cdna 186^335 2 EMBV3_23687 GeneID:614627 2 GENE TMEM222 C2H1ORF160 MGC129106 transmembrane protein 222 EMBV3_25143 ATGTTGGCAGGAGAACATGGAACGGGCAGGATGTTGTGGTTATGGACACTCCAGCACTCT Gene GeneID:531516|GIMAP8:XM_002687147:541_cdna Constitutive 0 NULL GeneID:531516 4 GENE GIMAP8 NULL GTPase, IMAP family member 8 EMBV3_38893 GTCATTCAATAACCAGGGTCCTGCTGACTCCTGCCGCCTTTCAAGTCTTTGTGCACCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28173 CTGCAACCAGTTTTGCCCCAAAGTTATATGGTACCATGAGTATTTTGATCTCCCCAGTCC Gene BVV0101_007274 + 0 NULL GK000013.2:75534522-75563517 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00050169 1 XLOC_030298 NonCoding TCONS_00050169 XLOC_030298 NonCoding NonCoding - 13:75536234-75536758 - TSS37345 524 1 0 0 0 0 0 0 0 0 0 0 2.35562940401272e-05 0 0 0 0 0 5.04038009537175e-05 0 0 0 0 0 0 1.75077251737577e-05 0.000831833199553818 0 0 0 3.66609319446887e-05 0 0 0 noncoding 0 0 0 0 -0.00890978538997147 0.978094106591963 -0.0443774299174589 0.63965002570044 ATCAGGTTCAGGCTTAGAAGGGCCTACTGACCTAGTCCGCCCACTTACTTTGTACTGCTTTCTAACACAGGGTGACTATGATTCAGAGAGAAATGTAAAGTCTTTGATTATTTAAGCAGTTTTCAAAGTATCTCTGGAATACATGGGGAGTGGTGTTAGTGGCATGCACATTTCTTTTAGATAAGGACCATATTTCCCAGCAGGATTCCATGTATTATTAAAGAGTCATGTAAATAAAACTCATCTAAACACTGACTTGACTCAGCAAACATTTAGGTGAGAATATGGAACACAAGGTACTACTATAACTGGTGTCTATAAATACTATATAATTTTGCCCTCATCATATGAAAAGGACTACTGCACTGTATATTTAGTGGCCCCCCTGCGAGGGCCACTAAATATAGGACTGGGGAGATCAAAATACTCATGGTACCATATAACTTTGGGGCAAAACTGGTTGCAGTTAGAATGAAGGAGGTAAATATTTTCCTTTGAAGTTCGTGAAATTCTTTGCAATCACT TCONS_00046275 TCONS_00046277 . 5' 1714 TCONS_00046275 TCONS_00046277 . 5' 1714 EMBV3_33246 ATATCCAGATTCCTCTGGATTATGAAACAGGATGCTGCAGCAGCTATTGACAACATGAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42073 AGATCTGGCAGTCTACGGTGTGCTGCGTGTGATGGAGGGTCTAGAGGCCTTCGACGACCT Gene GeneID:493639|PTGES2:NM_001166554:22_cdna Constitutive 0 NULL GeneID:493639 11 GENE PTGES2 MPGES-2 prostaglandin E synthase 2 EMBV3_14366 AGTGTAAGGTCAGATATTACACATATCCTAGAGGAAAACATAGGCAGAACATTCTTTGAC Gene BVV0102_069832 + 1 EMBV3_08169 GK000008.2:95961627-95971529 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24257 TATTTCAACCCCTACATGTGTTACCCTTGCCACCACATCTTCTGTGAGCCCTGCTTACGG Gene GeneID:540391|RNF180:XM_002696303:6_cdna Constitutive 0 NULL GeneID:540391 20 GENE RNF180 NULL ring finger protein 180 EMBV3_29224 CCCAACATGCACAGTCTGGCGACGGCTGCGGTCGGCATTTCTTGCAGCACACATCCCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26211 CAAGGAAGCAGGAGATGGGGGGAAGGATGGGTGAAAAGGCAACCAGCAGCTAATGATAGA Gene BVT0102_147722 + 0 NULL GK000030.2:34803349-34852874 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27626 TGATGATTCAGCTGGAGACGGGGAATGTGGCTTAGAGCAGTCCCTGGTTTCTCTGGAGAT Gene GeneID:505771|PEX1:XM_002686652:77_cdna Constitutive 0 NULL GeneID:505771 4 GENE PEX1 NULL peroxisomal biogenesis factor 1 EMBV3_42096 TGAGGCTAGAAATTGCTTCTGTTTGAACATCTTTGTGTCTTTAACAACTATGTTATTGAG Gene BVV0102_362951 + 1 EMBV3_39668 GK000022.2:44183680-44213142 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16641 AAGCTGTCACATTCCCATGTGGCATGGTTCTCGTGTCCTCTGACCCTTCGCCCATCTCTG Gene BVT0102_429581 + 1 EMBV3_00460 GK000016.2:42825906-42840312 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067254 1 XLOC_041391 Coding TCONS_00067254 XLOC_041391 Coding Coding - 16:42837151-42837981 - TSS50611 589 1 TCONS_00067254_2 97 0.383701188455009 2 0.291917973462002 6.9299018189154e-05 0.000341202873682318 0.000109979565329207 0 8.38231121953126e-06 6.07310074285184e-06 0.000178218654066235 1.00419692961627e-05 0 0 0 0 0 0 1.66594424524035e-05 0 0 0 1.21747477115308e-05 0.000341867769655513 0 0 3.11513573261542e-05 0 1.17971939460656e-12 3.58853295985402e-05 0.000298428642175111 0 0 0 NM_001101133.1 FAM26D Bos taurus family with sequence similarity 26, member D (FAM26D), 9e-56 221 87.03 0.305602716468591 0 coding 0 0 0 0 -0.408833338777372 0.371110503623581 -0.0751120965904428 0.237990803033626 TGGGGTTGGCTGGCTTTCCGAATAAAGTCGCTATTCCTTGTCCCAACAATAACAAAAAAAAGACGGAGGGACCAGAAAGCCTTTTGCATCTAGAAGAGGCTGCTTATCCTCCACCAGACCACCATCCTGATTTAGGATTCAGTTACATAGATGTCTCTCCAGCTGCAAAGCGGATCCCTTCCAGGAAGCTGACGCCCGTCATCTTGACATCAGATCATATTGGATGTGTTGAATATGGCTTGAAGAGGCAGACCCTGATGCTGGAAAAGATTGAAGGCAGGAGGAGAAGGGGACAAGATGGATGGCATCACCAACTCAATGGACATGAATCTGAGCAAACTCCAGGAGATGGTGAAGGACAGGGAAGCCTGGTGTGCTGTAGTCCATGGGGTGCCAAAGAGTCAGACACGATTGAGTGACTTAGCAACAAAGGCTCCACCTGTAGCTTCTAGGTGGTGGAAGGGGTCTTGGCTTCAGGACATGATGTATGGCTCGGTGACTCCTCAAGGGGCAGGTGAAGCTGTCACATTCCCATGTGGCATGGTTCTCGTGTCCTCTGACCCTTCGCCCATCTCTGGCAGGCTCAGGA TCONS_00069236 r 3' 51 TCONS_00069236 r 3' 880 EMBV3_36333 CCCACTGATTAAAAACAAACATTCCAAAGGGTGTCTGGGAAATATCGTTTACTTATGAGT Gene BVT0102_379053 - 1 EMBV3_40859 GK000019.2:22842390-22856303 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092740 1 XLOC_056964 Coding TCONS_00092740 XLOC_056964 Coding Coding FAM101B 19:22830134-22844971 = TSS69712 4251 1 TCONS_00092740_1 347 0.0926840743354505 6 0.713871663521165 0.000672257662647883 0.000829128349078399 0.000654342800196396 0.000400354252937828 0.000299706108047293 0.000119084952708494 0.000339514488747019 0.000252978378117276 0.000631857038928904 4.94575839270239e-05 1.49322575567498e-05 1.47933781632321e-05 0.000159413204248267 6.79432498830745e-05 0.000130008304867786 0.000260232361226878 7.74082776338645e-05 0.000125874927083347 0.000352736144388887 0.000560345926885367 0.000117978482058275 0.000118333012570088 4.29098110853515e-05 0.00021212253230134 0.000516676024105865 0.000441105109579235 0.000480180578058985 3.13464763208246e-05 3.06407312342636e-05 2.52431746988465e-05 XM_002695711.3 FAM101B PREDICTED: Bos taurus family with sequence similarity 101, member B (FAM101B), mRNA. 0.0 7162 99.90 0.935544577746413 NM_182705.2 FAM101B Homo sapiens family with sequence similarity 101, member B (FAM101B), mRNA. 0.0 827 76.33 0.264643613267466 TCONS_00092740_1 sp|Q5SVD0|F101B_MOUSE F101B_MOUSE Protein FAM101B; 3e-90 274 80.00 0.46685878962536 1 coding 0 0 0 0 0.0677989475552427 0.52897813797528 -0.00779316939864819 0.907070878989122 ATGGCCCAGGGCTTTGTTACCCACAGCGGTGACGGCTTGGCCACAGCCTCTGAATGCCTGGTGGAGCTGATGGTGGTCCTGTTGGAGGGCACTGTCACCCAACTTAGCAGAACCAGAGGCTGGGGCAACCCTGCGGGGAGAGGCCTCAGGCCAGGAGCCAAGTCCTACAAGGACACCGGTCTGTGTGATCCAGGCGGGGGCGATGGCCGCTCTGAAAGGACAGCTTTGAGAAGAGGCTACTCTTCAAGCAGGGTCCGTGGTGTCATTCTGGCTCGAGATTCTAGCGTCCGTCGGCCCGGCTGGCCCAGGCCGAAGGGACAAGGCGCCCGTGGGCCCGGTGCGAGCGGGGTGTTGTGTCCGCCTGCGGCGGGGCGGACGGCCGGGTGGGGCAGGGGTCCCGGGCCGGCGCCCCCGGAGCCTGAGATCGGCCGCTCGCGGCGGGCTGAGCGGCCAGGCGGAGGGCAGTGCGGGCGGCGCACGGCAGGAGCGCAGCGGCCCCTGGCGCCCGGCCTGGCGGCTCAGCCACCGCGGGCGGGTCGGGCCCGGGCGAGGCGGGCCCCGGGGACACTGGAGCCAGACGCAGCGGCCTCCCGCGCGGCCCCGAATCCAGCTTCTCTCCCCAACCCCCTGGGCTCCGGCTGCTCACCAAGGTTATGCCCCCTGTCCTTTGGCGAAGGAGTGGAGCTTGACCCCTTACCACCAACAGAAGTAAGGTACACGTCCTCAGTCAAGTACGACTCAGAGAGGCACTTCATTGACGACATCCAGCTGCCCCTGGGCCTGGCAGTGGCCTCCTGCAGCCAGACCATCACCTGCATTCCCAGCAGCACGTGGCGCAACTACAAGGCGGAGGTGCGCTTCGAGCCCCGCCACAAACCCACCCGCTTCCTTAGCACCACCATCGTCTACCCCAAGTACCCCAAGACTGTCTACACCACCACCCTGGATTACAACTGCCGCAAGACACTGAGGAGGTTCCTGTCCAGCGTGGAGCTTGAAGCCACAGAGTTCGCGGGCGGTGATTACCTGTTGGAGGAGAACTGACTGGAGCGGGCTCCGGGGGGGCCGGCCCCCTTCCCCAGGCCGGTCTGGTTGGGCCAGGCAACCCTCGCATGTCCTTCTAGCCCCAGAACAGTCTAACCCAGAGATACCTCTAAGCCCAGCCTGGGGAAGAAAAGAAAATGTCACAGTAGCTTCTAATTATCCAGCGAATTCGGTTTTTACAGTTTTTTTTTCCAACTGTGTTTAAAGGGAGTATATTTCCTAATTTGCTGCTACATAGCTTCCCCGAAGTCTCAATTTGATGAGAAAATCAAAGAATGGCTTAGAGCGAAAGGAAAATGCCCCACACTTTGAAATAGGGAGGAGGGGGAGCGCTTCCCCCATTGGTCAGTCTGTTTAAGGAAGAGCATGGGAAAATCTCCCTGAGATGGAAAAAGTGAGTTTGAAGAAATTTCAGCCCCGGGTGTCTTCACTACTACAGAAGTGGTGCTAATTCAGTGAGCTGTGACACCCATATGGGTTCAATCTGTGGAGAGTTGAGTTCCATTCTGTTTTTTTTTTTTTTTTAATTTCTATTTGTATTTCCTGTTAACTATAACTCTTTGGAATTCTCTAAATCTTTTTTTGTGATATGGGAAAAAAAACCCAAATCACAATATAAGATGCCTTTCAAAAAAGAAAGAAAGAAGGAAAGAAAAGGTTCACCCTATTCTTGCCTCTACAGTGGGGTCAGGTCAACTGGTGGCTGAGTTTGGGGGTAACAGGTTGGTTCCAGTTCCTTCCACTGTGGGTTCCAAGCTTGGTTCCAAGCAAAGTGCCTTGAACCTTTGGCATCTGACAATGTCTTCACTGGGGCTTCCTTGGTGGCTCAGTGTGTAAAGAATCCACCTGCCAATGTAGAAGACTCAGGTTCTATCCCTGGGTCAGGAAGACCCCTGGAGAAGGAAATGGCAACCTACTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGACTGATGGGCTGCAGTCCATGGGGTCACAAAAGAGTCGGACACGACTTAGCAACTAAACAACAATGATGTCTTCACAAGCTTGTTTAACTCTTCCTGATATGAGTTTTGGGGTTTCCAAATACTTTCCTAATTTTTTCACCAGGCAAAACATAGCAGAGGCACCTTTGGAGAGAAACAGCATTTTGAGAGAATGCTTAGGGAAAACACTTTTGGGGGAGTCCACGAGGGGGACTTTACTCACAGTGGGAGCCAACAGCTATACCTAAGGCTTGATTCCCACTGGGAGATAGATGTTTCTAATGATCTGGTTCATCAGGGTGCGTGTCCTTTCCAGCGACCTTGGGTCGGCATTGCAGAGGAATTTTGCTGGTGCCTGAGCTCTAAGCTAAAAAGCAAGGAAATCTGCCCCCCACCCCACCCCCAACCCAAGTGAAATAAAGGTGAACTGAACATCGGGAGTGATGTCACAAGTCAAACTCCAAAGCCCGGGTGCCGTGGTGACTGTACATGTTCAAGTGTTCCTTTTAATGTGACAGTCATGGCATTGAGTGTGAATGGAAGAAACTGTGAATTTAGCTGATGGGGCCCCACAGAAGTAGGGACACAGGCTGGGCCAGACCAGGAGGGCACGGAGGCCAGGCTGCCTCTGGCCTTCAGCCTCTTGCCTGCCCTGCTTCACACCCAACCCCGCCCTGCCTCACCTGGTCCTGACTTTTTCCTGCTGCCAATCCCCGTGGATTTTGAGTAAAGACGGTGGCAGATGGCTTTTGCTCTTCTGGTATTGGAGAGAACAAAAGCGTGGGTATTTCCTTTGCATCCAGGCGATGTCAGGTGCTTGCAGTCCTGGAAGCCTGCACTCCCGCTGTATCTCCGGGTTTGTGCTGATGGCTTCCATCTGTCCTGAAAGCGGAATTGAGGGCTCGGTGGGTACCCTGGAGCCACAGCGGGACTTCTGTTCAAAGGAGAGCAGGTGTGACGATAATCACTGTCATTTGAAGTCATCAGAGGCCTAGCGGGCTAAATGGTCTGCTGTCTTTCTCAAATTTAACAGCAGTATGTCCAATTGTGCGCCTGACTAGAAGCATCCCTTCCGTGGAGCGTGCAGTCGGCTCCATGGCCCCAAGTTTGCCACCATGAAGCTCAGCAGGGGTCCCTCAGGGGGCACCCCAGAACCCCATAGTCTCCTGTCATCATGCAGAGCAGCAAATGCCTCCTGCTTTTGGAAGAGTGACACGGCATTTATGAATAAAAATGGCTTTTTCTCTCTGACTTCATAAGCTTGTCATGTAAGACAAGTGATAAATGTAATTTTTAAACTATGGTAAGAGAATTCCCGTGGCTTTCTTGGTGGCTCAGTGGTAAAGAATCTGCCTGCCAGTGTAGGAGATGCAGGTTCAACCTGGCTCAGGAAGATCCCTTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGGAAATCCCACTGACAAAGGAGCCTGACAGGGTATAGTTGCAAAAGAATCTGACATGAGTTAGCAACTAAAACAACAATGAGAAAGAAAATTCCAATTGCTCTGGCCCAATGGAGACACATGACGAGCTCAGGATAATGTCGTGGGCAGCACGACTGGAAAGACCAATGGGAGGGAACGTCATCTTTGAACGCGGCCCTTTGTTGAGATGCACATGTGAGGTTTTTTGATATGAAATACGTCAGTAAAGTAAGTAGAAGTGAGTGCCTGTGGATGTGTCGTGTGAATGGAAAAGCAGATTTTGATTTTGTCATCCACCAGGGACCCAACTGCAATTTTCTCGAATCCTTTTTTTTTCTCCAAATCTGCTTTGCTGAAAGTTGCAAAAAAGGAAGCAGGTGAAGATGTAAATTGAATGTCATCGATCAGTGGTGGATTCATATTAGTTCTCAAGGTGGAAGTGATGATTTTTAAAACCCACTGATTAAAAACAAACATTCCAAAGGGTGTCTGGGAAATATCGTTTACTTATGAGTTAAAAAGTCTCTTTTCTCGGACTCTTAAATTTAATCTTTTGTGTAATAATGATCTATATATTCAGAGAAAGGTTTTCTTTTGAAATCACAGGCATTTGAAAAAGATTAAGTACCTCTTCATTTGATACATTTCCTGTTTCTAACCTTAGGAATAGTATTTGATGAAAACGATATTTTAAATTTATGTTTGACATCTGTTCCCCTCCATTTTGCTTTATGACTTCTTCATTTAATAATAAATTACCTTAAAAAAAACTCA EMBV3_06353 ACCTGAGATTCAGCCCTTTGCCCATCTCACGATTAACGCCACTGACATCCCATCAGGTTC Gene GeneID:513836|TNFSF11:XM_002691773:362_cdna Constitutive 0 NULL GeneID:513836 12 GENE TNFSF11 NULL tumor necrosis factor (ligand) superfamily, member 11 EMBV3_42576 AGATCAACGTGGAGGAAGTGCATGCCGTCATGGAAGCCTATGAGAGCAATCCCGCCGAGT Gene BVT0102_228963 + 0 NULL GK000010.2:4606923-4618826 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015720 TCONS_00012361 TCONS_00012359 TCONS_00015722 TCONS_00012360 2 XLOC_008541 XLOC_007847 Coding TCONS_00012360 XLOC_007847 Coding Coding CDO1 10:4605177-4608561 x TSS9399 377 1 TCONS_00012360_1 57 2 0.88915164055572 0.024652795238847 0.0148534141288351 0.0190314330968924 0.0153480265661341 0.0142994772541531 0.00379350721460578 0.00983305529637469 0.00784894510513168 0.0103842183414224 0.00250125774930619 9.54501783754235e-05 3.8507132383812e-05 0.0017591063637351 0.00396218835501641 0.00330302873940961 0.00092143563355719 6.71550599769414e-05 0.000795480878023823 0.0286855887232932 0.0281062195470154 0.00889094690189063 0.000225218850612279 0.00134572874668812 0.000509410751018812 0.0340025699628478 0.030100499891936 0.0124224729573287 7.09094402219521e-05 0.000200976131323165 6.72874012452121e-19 XM_005211243.1 LOC101906804 PREDICTED: Bos taurus uncharacterized LOC101906804 (LOC101906804), 3e-167 590 99.40 0.877984084880637 NM_001801.2 CDO1 Homo sapiens cysteine dioxygenase type 1 (CDO1), mRNA. 3e-79 298 84.17 0.729442970822281 TCONS_00012360_1 sp|Q3SZU4|CDO1_BOVIN CDO1_BOVIN Cysteine dioxygenase type 1; 9e-35 119 100.00 0.982456140350877 1 noncoding CTTGATCATCTCATTGGATTTCTTGTCAGGCCAGGCAAACAATGTCTCCTTTAGGCCGTGGCCCTCGTGCATTCGGGGGCTTTGTGTCGCGTGTAACTGTCTAGCCGGCGCCTAGGAACTCTCGCCTCCGGCTCCTCGGCTCGCTCAGTTCCTCCTCCATCGCAGCCCAGCAGCGAGACGCGTGCCGCCAGTTACTCGGGGGATGGAGCGGACCGAGGTGCTAAAGCCCCGCACCCTGGCCGATCTGATCCGCGTCCTGCACCAGCTCTTCGCCGGCGAGGAGATCAACGTGGAGGAAGTGCAGGCCGTCATGGAAGCCTATGAGAGCAACCCCGCCGAGTGGGCAGTGTACGCCAAGTTCGACCAGTACAGGTGAG TCONS_00015725 TCONS_00015720 r 5' 0 TCONS_00015725 TCONS_00015720 r 5' 0 EMBV3_10609 AACTGAAACTCAATTACCGCTGCTGCTCACTCGGTTCCATCCCCCCGAGTTTAGATAGCG Gene GeneID:539385|LOC539385:NM_001104992:103_cdna Constitutive 0 NULL GeneID:539385 3 GENE LOC539385 MGC152562 hypothetical protein LOC539385 EMBV3_10343 AGGCCTGTTTGAACAAGGAGCCGAGCTTTAGACCCACCGCTAAGGAGTTACTGAAGCACA Gene GeneID:100336086|LOC100336086:XM_002691976:56_cdna Constitutive 0 NULL GeneID:100336086 12 GENE LOC100336086 NULL serine/threonine kinase 24-like EMBV3_08399 AGGAGGTTCTCTACAAGCTGACCAGCGAGAACTGTGAGCACTTCGTCAATGAGCTGCGCT Gene GeneID:506802|PLA2G16:NM_001075280:527_cdna Constitutive 0 NULL GeneID:506802 29 GENE PLA2G16 HRASLS3 MGC140776 phospholipase A2, group XVI EMBV3_03710 GGAGTGGAGTGAAGGGTGTGTTCTGCGCAGCTTCCTCGGCTGTCATGGGACTGATCGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22112 CTGGTTCCAGTACCACTCTTTGGATGTGATTGGCTTCCTGCTAGCCTGTGTGGCAACTGT Gene GeneID:526979|LOC526979:XM_002688305:128_cdna Constitutive 0 NULL GeneID:526979 6 GENE LOC526979 NULL similar to UDP glucuronosyltransferase 2 family EMBV3_38241 GGATCTGATGTTCCAGAGAGAGAAGGCAAGTCCATCTCCACTATCATCACCAAAGGAGTC Gene GeneID:616486|LOC616486:XM_002695597:154_cdna Constitutive 0 NULL GeneID:616486 19 GENE LOC616486 NULL similar to Uncharacterized protein C17orf47 EMBV3_24523 CTGGAAGGCGCCCTGCGGGCAAAAGAAGACAGAGCAAAGTTCTCATAAAGGCCTGTTTAA Gene BVV0102_082609 + 1 EMBV3_05170 GK000017.2:74598157-74607592 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081966 1 XLOC_050843 NonCoding TCONS_00081966 XLOC_050843 NonCoding NonCoding - 17:74599972-74600142 - TSS61906 170 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000495126644753858 0 noncoding 0 0 0 0 0.0230555830347774 0.890449966247053 0.0086426797515875 0.87052362116587 TCCCCAGCACCTGCCACGCCTCCCCCCATAGGGCTGCCCTCTAAACTGCAGCTTCCGGAGGGAAAGTTTTGCTAAGAGGTCTCCTGGAAGGCGCCCTGCGGGCAAAAGAAGACAGAGCAAAGTTCTCATAAAGGCCTGTTTAAGAAGAACGACTCAAAGCTATGCTGACC TCONS_00078356 TCONS_00078359 TCONS_00078360 TCONS_00078361 TCONS_00078362 TCONS_00078363 TCONS_00078364 TCONS_00078365 TCONS_00078366 TCONS_00078367 TCONS_00078368 . 5' 1818 TCONS_00078356 TCONS_00078359 TCONS_00078360 TCONS_00078361 TCONS_00078362 TCONS_00078363 TCONS_00078364 TCONS_00078365 TCONS_00078366 TCONS_00078367 TCONS_00078368 . 5' 1818 EMBV3_13636 TTGCCCTCCCACCCATCAGCACACGACTTTTGTGTGGTTCGCCTCACATCCTTTAAGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28591 GATGATCCAATGCTTTTGTCTTCAGGGAGGGTGCAACTGGTTGTGGGGGATGGACGAATG Gene GeneID:613854|PCMT1:NM_001079617:5_cdna Constitutive 1 NULL GeneID:613854 9 GENE PCMT1 NULL protein-L-isoaspartate (D-aspartate) O-methyltransferase EMBV3_16203 TGGTTGGACACTGCATCATATACACACCCCGCCTGTCCATCCCGTTCACTGTAAAGGTAT Gene BVV0102_150374 + 0 NULL GK000008.2:73153338-73180098 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15051 TGAGCACTTGGACCACGCTCTGCTCTACGGGCCGGGCCTGGCTGTACCTGGCCCTCAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13774 GAAAAGGGCATGCCTGTGACTGCTCGTGTGAATGGGGACAGCGTGATGGTCCTTCCAACC Variant GeneID:282438|PRDX6:NM_174643:22_cdna 436^582 4 EMBV3_28486 GeneID:282438 16 GENE PRDX6 AOP2 KIAA0106 peroxiredoxin 6 EMBV3_38673 AAGGCTGGCTAGGTCTGAATCATCGCGCCCTCTCTCTTGTCCAGTGGGGACTTAACAAAA Gene GeneID:540114|PWWP2A:XM_002689348:43_cdna Constitutive 0 NULL GeneID:540114 7 GENE PWWP2A NULL PWWP domain containing 2A EMBV3_14551 GGAGTCTGAAGTAGCTAAACGGCTATGAAACTGAGAAATACATTCATAGCTGCAGAAACC Gene GeneID:534366|C23H6ORF62:NM_001077999:122_cdna Constitutive 0 NULL GeneID:534366 23 GENE C23H6ORF62 MGC143370 chromosome 6 open reading frame 62 ortholog EMBV3_05074 ACCTCTTCTCTACGTGGTCATCATGGCACAGAAAGTGTGTTGGGCACTGGTACTTACTCC Gene GeneID:786201|LOC786201:XM_002693747:505_cdna Constitutive 0 NULL GeneID:786201 15 GENE LOC786201 NULL similar to Olfactory receptor 8K1 (Olfactory receptor OR11-182) EMBV3_25511 GATAGCTACCTAGCCAGCCGAGAAAGAAATTAGTCCATTTGTACCCTGGACCACGAGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38178 GCACAAGTCCGTTAATCCCCGTCTGGACTGAGCCGCCTTTGGCTTCGGAACTGGAATTTT Gene GeneID:531733|H2AFX:NM_001079780:155_cdna Constitutive 0 NULL GeneID:531733 15 GENE H2AFX NULL H2A histone family, member X EMBV3_27144 CAGAACGTGATGCTCTACGTGACCGCCATCTACAAATACTTCGAGACCTGAGCGCCCGTG Gene GeneID:519751|CYTSA:XM_002694675:234_cdna Constitutive 0 NULL GeneID:519751 17 GENE CYTSA SPECC1L cytospin A EMBV3_02002 TTCGACGAATTCCAAACGGGCATCCTCATCTACGAGCTGCTCCACCAGCCCAACCCATTC Gene GeneID:533821|LOC533821:XR_084660:25_cdna Constitutive 0 NULL GeneID:533821 27 PSEUDO LOC533821 NULL similar to pragmin EMBV3_24230 CCAGGTATCAGTATCCACAGTGCCCACAGCCCACAATAGTTCTTCATCAGTAACAGTCAC Gene GeneID:100300021|LOC100300021:XM_002692936:59_cdna UTR3_Alt 2 NULL GeneID:100300021 15 GENE LOC100300021 NULL similar to transmembrane protein 123 EMBV3_25444 CCTGAGGAAGAGGGACAAGAATTAAAGAAAGGGAAATGAGAGGGGGCAGCAGGGGATGAG Gene BVT0102_403789 + 1 EMBV3_25185 GK000003.2:110777362-110784498 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04177 TTCCTGTCAGAGCAGCATTAGTCAGGCAGTCTTGTTCTCAGTTACTCTGGCTTTTGAAGC Gene GeneID:535260|FAM151B:NM_001099713:10_cdna UTR3_Alt 2 NULL GeneID:535260 7 GENE FAM151B NULL hypothetical protein LOC535260 EMBV3_40046 CTCTCATCATGCAAAGGAGATTGAGCGCCTGCAGAAAGAAATTGAGCGGCATAAGCAGTC Gene GeneID:327699|ATPIF1:NM_175816:51_cdna Constitutive 0 NULL GeneID:327699 2 GENE ATPIF1 MGC137022 ATPase inhibitory factor 1 EMBV3_36167 AGGTGGAGGAGACCCTGAAGCGACTCCAGAGCCAACCTCATGCACAACTTCATCTTGAAG Variant GeneID:513342|DYNLRB1:NM_001034442:1024_cdna 86^174 1 EMBV3_19620 GeneID:513342 13 GENE DYNLRB1 MGC127103 dynein light chain roadblock-type 1 EMBV3_06642 TTTGGGGAGAATGGATAAACATGGCGCGAAGGCCCCCTTGTGGAAGAAGGAGCTGGAGGA Gene GeneID:616835|LOC616835:XM_002695650:98_cdna Constitutive 0 NULL GeneID:616835 19 GENE LOC616835 NULL similar to Uncharacterized protein C17orf50 EMBV3_26042 GGCTGCCTTCAGAAAGGTCTCCTGACTGCTCTGTAGCAGGTAATTTTTATCTGTCTGCTC Gene GeneID:287019|PFKFB2:NM_174812:28_cdna Constitutive 0 NULL GeneID:287019 16 GENE PFKFB2 NULL 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 EMBV3_22468 AGGAAGTCTTTGAGGGAAGATTGCAAGAAAGCACGTCTAACCAATTCCAGATACCTGTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12184 CAGAATCCCAGCCTCTCACCCATCAGAAAATTGATTAGAGATGGCAGCATTGACCTGGTG Gene GeneID:510506|CPS1:XM_002685554:169_cdna UTR3_Alt 2 NULL GeneID:510506 2 GENE CPS1 NULL carbamoyl-phosphate synthetase 1, mitochondrial EMBV3_41750 GAGACTCAGCAGGGAGAAATATGAGTGGGCAAGTGGCATCAACATTGGGACCTACAAAGC Gene GeneID:100297941|LOC100297941:XM_002699512:20_cdna Constitutive 0 NULL GeneID:100297941 X GENE LOC100297941 NULL similar to X antigen family, member 5 EMBV3_17731 CGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACA Gene GeneID:100337423|LOC100337423:XM_002698265:939_cdna Constitutive 0 NULL GeneID:100337423 25 GENE LOC100337423 NULL hypothetical protein LOC100337423 EMBV3_11497 GACAGGATCTCTGATATGGGAGAGTTGAAGCTTCAGCTTCTGGAGATGGTAAAGAGGACT Variant GeneID:100297492|LOC100297492:XM_002695483:221_cdna 233^382 1 EMBV3_41136 GeneID:100297492 18 GENE LOC100297492 NULL similar to double homeobox, 1 EMBV3_41686 TCAGCCCTGAGTGTTCAGGTGACGCAGGTGTGGCAGAGCTTGCAGATTTAGGCAATAAGT Gene GeneID:614521|RAB35:NM_001098127:261_cdna UTR3_Alt 2 NULL GeneID:614521 17 GENE RAB35 MGC139264 RAB35, member RAS oncogene family EMBV3_04267 GGACCAAATGATCTCTAGAACTTCTTCCTGTTGTTCTGTGCTTCAGGGAACTTGGGATCT Gene BVV0101_014359 - 1 EMBV3_08684 GK000006.2:59866461-59889489 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40573 GTCATTTTACTTTTGCCCTCCTGACAAATATTCTAATGTAGCTATTTTTCTTGTTGCATC Variant GeneID:616317|STMN1:NM_001034790:284_cdna 637^750 2 EMBV3_15452 GeneID:616317 2 GENE STMN1 MGC127518 stathmin 1 EMBV3_36079 TTTTCCAAAGCAGCCCAGTGCCTGCAGCGAGGTCCCCAGGAAGTCTAAGGGATTTATCCT Gene BVV0102_074973 + 0 NULL GK000020.2:1-72042655 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118445 1 XLOC_072611 NonCoding TCONS_00118445 XLOC_072611 NonCoding NonCoding - 20:72020216-72021671 - TSS88913 1455 1 TCONS_00118445_1 93 1 0 0 0 0 0 0 1.22922640129507e-05 0 0 0 3.25200270265701e-05 7.86662277434981e-07 0 0 0 0 0.000314639847975331 0.000125515593897857 0 0 0 0 1.02002268653543e-05 0.000135561637961718 1.72831205193051e-05 0.000104760541639659 1.45267449671616e-05 1.20807209703397e-05 3.30074411259793e-05 3.67015049693767e-05 0.000181813188686205 XR_232853.1 LOC101909421 PREDICTED: Bos taurus uncharacterized LOC101909421 (LOC101909421), 0.0 839 75.83 0.706529209621993 0 noncoding 0 0 0 0 -0.034142387074609 0.757033454679214 0.0101554384224792 0.848614882017471 ACACCTGGCCCGCGTCGGGGGCGGAGCGCGCACCGGGGGCGGAGCGCACCTCCTCCTAGCTCCTAGGCTGTGGGTCCTAGGTCTCAGGGGTCGCCATTGCGGCTGGGAATGCCCATTTCGTGGGCTCCTGGGTCCCCATCGATCGGCATCCAGTGAGCGGAGCGGAGAGGTGCGGACCACAGGTAAAGGAACTGGGGCTCCGTGGCACAGGGTGGAGCAGGGATCCATGTATTCCGCCCTCTCTGTTGGCACAGTCTCGGAGCCCCCTAACCTGGCGGTCGCAGAAAGGCCTCGCCATTGGGGTCAAGGCCTTTACCACTTTACCCCTTCGCATAAAGCTCAGACCCGCGCGGTTTTCCAAAGCAGCCCAGTGCCTGCAGCGAGGTCCCCAGGAAGTCTAAGGGATTTATCCTGCCTGGTGATTTCACCTGCTGGTAGTCCACAACCCTTACTCTGGCCGACTGGCCCAGCCCTGCTACCGGCAGCTTGCAGCCCAGCGGGCCCTTGACCACCTGCTGGGATGGGGAAGGGGAAGGGTCCACGAATTGCACCCTAGAAACTTAGTAGGGTGCATGGATTTAAACACGTGGTGGTCGCCCAGGCAGAAAAGAAGGGAGGAGGGCACCTTGCTGCTCTTTCATGGTGGAATCTGTGGCTGTCCTGCTGAGAGGGGGGCCTTTCCATGAGGACCCTGTGCAATAAGTGTGGTGTTTTAGAACTGAATAAATAGAACGTGTTAATTTTTTTTTTTTAAATTATGTGGTGCTTTAATTTTAAAAAAAAAGCTCCAAGTTTTTTTGCAAATTGAGGTCTAAAAATTGAAGGCCTATTTTCCTTCCACTGTGGCATTCAGTGGAGAAATGTGCGGTTTTTTTTTTTTTTTTTTAAGAAAAGAGTCAGAAAAGTGAGGGAAACAGAAAGCCCAGAGGTGCCCCTGTAGTTTGGTGAAGGCTTTAGGAGGTCACTTGTAAATGCTGCTGGCTGTAGGGAGGCAGTCTCTTCCTGTGGCTGATGGGCACAGAGCTCTGCAGGCTTGTCCTTTGCATGGATGTTCTTGTTTGTGGAAATCCAGCTCGGAGCCATCTCCTGATGTGTAAGAACTTTCCAGACTAGACCCCTAGGCAAATCCCTTAGGGCCAGGGACTCCTTCCTTCATTGTATTTGTCTGTTTGACTGAAAAGCAGCAATGACATATTTTTCTTTAAATCTGGTCTATCATCCAGGCCTTGGAGTAATATTTCCCATCCCTCTCAATAGGCTTGGGTTCCAGGAATGAACTATGGTCAGTTGTCCATGATTCTACAGATGAGGACACTGAGGGTGGAGGACTGTCTAAGGGAGAATGGAGATCCTTCCAGGAACCCTGGCTCCTGGGTTTTTAATGAGCTTCCTACCCAGCACGGTCATTGATTGGCAAGTGTTGACATTGAGAATAAACTATTGGTGGAAATGTGA TCONS_00115351 . 5' 30852 TCONS_00115351 . 5' 30852 EMBV3_07530 GAGGTTGTGGCTGGGATAAAGGAGTACTTCAATGTGATGCTGGGCACTCAACTGCTCTAC Gene GeneID:614390|MORF4L1:NM_001035448:51_cdna Constitutive 0 NULL GeneID:614390 21 GENE MORF4L1 MGC127691 MORF4L2 mortality factor 4 like 1 EMBV3_33159 TCCTTACGTCTACCTGCCTTTTGGAACTGGACCCCGAAATTGCATTGGCATGAGGTTTGC Gene GeneID:507988|CYP3A4:NM_001099367:116_cdna Constitutive 0 NULL GeneID:507988 25 GENE CYP3A4 NULL cytochrome P450, subfamily IIIA, polypeptide 4 EMBV3_21417 CAGAGCCCACAGGAGGCACACCTTGAAAGAAACGTGGACACGCAAAGAAGAGACGGATAT Gene GeneID:786867|LOC786867:XR_083758:11_cdna Constitutive 0 NULL GeneID:786867 9 PSEUDO LOC786867 NULL similar to retinoic acid early transcript 1E EMBV3_14516 AGAACCATAAGGGTATCATGCCTTCAGCTCCTACACCTAAGCCTAAGCCAGGACCTCTGG Gene GeneID:100138035|TMCO6:XM_002689220:62_cdna Constitutive 4 NULL GeneID:100138035 7 GENE TMCO6 NULL transmembrane and coiled-coil domains 6 EMBV3_25208 AAGATGAAGAGGCTGCTAAAGGGACAGGGCTTCCCTGACTATGTGGCGCCTTTTGGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26328 CAGGAGCTACTTTGGGGTGCTGGCTGCAGGATTAAGCCAATGCTTATGCAACTTGACTCA Gene GeneID:536558|HSPA4:NM_001114192:80_cdna Constitutive 0 NULL GeneID:536558 7 GENE HSPA4 NULL heat shock 70kDa protein 4 EMBV3_08406 AGTTCTGTAGCAGCCTGGTCATCTTTTGCTGGGTGTACGGTTTCCTCTGGTTTCTGATCC Gene GeneID:517667|LOC517667:XM_002690751:490_cdna Constitutive 0 NULL GeneID:517667 10 GENE LOC517667 NULL similar to olfactory receptor MOR106-5 EMBV3_02423 TGCTTCAGTGAACTGTTCTGTCCTGATCATTCAGTCTCTCTTTTTAGGTGCTTTGGTGGC Gene BVT0101_012101 + 1 EMBV3_11015 GK000008.2:61021658-61157468 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25408 CCCCCAGCCCTTAGTTCTTGATACCTTGCATGATCTTTCTGCCTTTCAGTTTATGGATCT Gene BVV0102_140618 + 0 NULL GK000001.2:80830465-80940146 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00573 GAGCTCCTAGCCATTGCAGAAAAAAGAAATACTCTTAACCTTTTTATACTAGAATAATAA Gene GeneID:520008|ZNF569:XM_002694960:104_cdna Constitutive 1 NULL GeneID:520008 18 GENE ZNF569 NULL zinc finger protein 569 EMBV3_19314 AGTGCAGTGTTACTCCAGTGGCATGAAAAGGATCTGATAGTCTATGCCTTTGTTCACGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06575 AAGGACACAGAGCCCAGTGGGAAGCCGGGACAGCAGTTGAATGTAACGCGTGGAACAAGA Gene GeneID:515377|CARD11:NM_001109796:185_cdna Constitutive 0 NULL GeneID:515377 25 GENE CARD11 MGC165904 caspase recruitment domain family, member 11 EMBV3_09601 ATAAGAGAACTCCTGGGAAGATGGCAGAGGAATAGGGCTGGAAGACCACATTCAGTTCCC Gene BVT0102_190267 + 0 NULL GK000030.2:102495303-102587818 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04458 GTCAGTTGTCCTGGGTTCTCTGCAGCATGAAGCCCACACACCCCTCTGCTTGCCCCGACC Variant GeneID:511877|LOC511877:XM_002698071:57_cdna 616^729 1 EMBV3_35836 GeneID:511877 25 GENE LOC511877 NULL similar to Polyserase-3 precursor (Polyserine protease 3) EMBV3_23278 ACACACTCTGATACATCAGCTTGCCTCTGCTGCACTTTAGTTTCCTATTTGGACATGAAC Gene GeneID:539290|PLSCR4:NM_001081732:53_cdna UTR3_Alt 2 NULL GeneID:539290 1 GENE PLSCR4 MGC148451 phospholipid scramblase 4 EMBV3_36591 TGGCGATTGGTACAAAAATAATTGGATTCCCGTCGTCCAGGTGCAGAGGAGGTGATGGTC Gene GeneID:100295554|LOC100295554:XM_002697831:517_cdna Constitutive 0 NULL GeneID:100295554 24 GENE LOC100295554 NULL hypothetical protein LOC100295554 EMBV3_12891 CTCTGTGGGCCTGTTTTCTAGTCAGTAAAATGGTAAGTTTCTGCCTCTTGGGGCACTGTC Gene GeneID:517750|LRRC10:NM_001075757:34_cdna UTR3_Alt 1 NULL GeneID:517750 5 GENE LRRC10 NULL leucine rich repeat containing 10 EMBV3_09975 ATGCCATCCCAACTATCTCCTCTTCTGTTGCCACCTTCTCCTACCCTCAAGCTTCTGCAT Gene BVV0102_092402 + 0 NULL GK000007.2:14190147-14233129 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13206 ATTCTCGTGAGCCAGTCTCCTGCCGGATTCACACAGGGAGCAGATCTCCCAGGTATTTAG Gene GeneID:100336382|LOC100336382:XM_002688433:58_cdna Constitutive 0 NULL GeneID:100336382 6 GENE LOC100336382 NULL TNFAIP3 interacting protein 2-like EMBV3_07766 TCTTGAAGAAGTGGGCCAATCTAGATCCAGGTCTGGACAGCAGCATCTGAAGTAAAGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40190 CAGACCACTAACACACCCAACAGCACCAACAAGTCCCAGCACGGATCAACAAGGCTCTTT Gene GeneID:789894|LOC789894:XM_002694879:883_cdna Constitutive 0 NULL GeneID:789894 18 GENE LOC789894 NULL similar to PAP-associated domain-containing protein 5 (Topoisomerase-related function protein 4-2) (TRF4-2) EMBV3_11891 TCGACGGAAGGCAGCGCCGCGGATCGAATGGTAAAAGCCATGGAAGTGGATGTAGAAGAG Variant GeneID:506421|NOP16:NM_001014856:87_cdna 143^251 2 EMBV3_15383 GeneID:506421 7 GENE NOP16 HSPC111 NOP16 nucleolar protein homolog (yeast) EMBV3_20137 CTCAAGCTGTTCCTGTCCTTCAGCGGCCCCGGCAAACAGGAGGAGAACGACGTGGTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02600 TTTATGGTGTTGGATGCCTCAGCAGAAGTCCCCACTCTGGCATACAGGATAATAGGCCCT Gene BVV0102_300104 - 1 EMBV3_02935 GK000004.2:49907596-49942906 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19309 CAAATGAATTTGTTAGTGCTGTGTGCTGGAGGGCACTTCCAGATGGGGAGTCCAATGTGC Gene GeneID:519896|RFWD2:NM_001103256:142_cdna Constitutive 1 NULL GeneID:519896 16 GENE RFWD2 MGC149014 ring finger and WD repeat domain 2 EMBV3_34349 TCCTACACTGGCAGGAGATTCTTTACCATAGCGCCATCTGGGAAGCTCAACTACAGCATG Gene GeneID:614200|CNDP1:NM_001102275:32_cdna UTR3_Alt 2 NULL GeneID:614200 24 GENE CNDP1 MGC179482 carnosine dipeptidase 1 (metallopeptidase M20 family) EMBV3_16311 TGGATTCGCGCTAAATACGAACAGCTGCTGTTCCTGGCGCCACTGGGCACTTCTGAGGAA Gene GeneID:504833|AGAP2:XM_002687557:575_cdna Constitutive 0 NULL GeneID:504833 5 GENE AGAP2 NULL ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 EMBV3_27432 AGCTAGAAGTGGAGAAGAGGTCAGAACAGGAACCAGAGGTCCAGAATGAGAGGAAACCAG Gene GeneID:783363|TCEAL6:XM_002699847:67_cdna Constitutive 0 NULL GeneID:783363 X GENE TCEAL6 NULL transcription elongation factor A (SII)-like 6 EMBV3_03641 GAGGGGCATACGTTGCCAGTCCCAGGCTATAATTCAAATCAGCAACTAAGTCCTGCTTCA Gene GeneID:510509|COX11:NM_001083403:11_cdna Constitutive 0 NULL GeneID:510509 19 GENE COX11 MGC148599 COX11 homolog, cytochrome c oxidase assembly protein (yeast) EMBV3_23306 TGCCCATTGCTTCCACACACCCTGCTCCATTACCTGGTTAAGAGAATGCACGTTAAGAGC Gene BVV0102_190709 + 0 NULL GK000030.2:40519264-40582924 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244275 1 XLOC_150416 Coding TCONS_00244275 XLOC_150416 Coding Coding IKBKG X:40501901-40522389 = TSS183615 5341 1 TCONS_00244275_1 419 0.160644074143419 11 0.739835017328062 0.000531434095916868 0.000752551464611391 0.000516323942706868 0.000318530800488083 0.000399337168138547 0.000468333948463572 0.000492436144762839 0.000355481343765274 0.000419546650553016 0.000241236279195115 0.000213191672397951 8.96171343991986e-06 2.70931254825103e-06 1.48045579384847e-06 0.000453901945079003 0.00182127516847076 0.000643450304500991 0.00071266629173465 0.000792481418825586 0.000486149301337897 0.000563835250256644 0.000670847131962313 0.000773076693396713 0.000564774490806143 0.000734230200537 0.000518062453724149 0.000578674139840925 0.000211938847722859 3.99930115886571e-05 0.000149516606616329 XM_005227727.1 IKBKG PREDICTED: Bos taurus inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma (IKBKG), transcript variant X4, 0.0 8401 100.00 0.871934094738813 NM_001099857.2 IKBKG Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma (IKBKG), transcript variant 1, mRNA. 0.0 1644 85.11 0.27054858640704 TCONS_00244275_1 sp|Q95KU9|NEMO_BOVIN NEMO_BOVIN NF-kappa-B essential modulator; 0.0 839 100.00 0.997613365155131 1 coding 0 0 0 0 -1.06314880154015 0.0400701658408916 -0.0437633785824897 0.383275960367516 CGCCGGAGCAGGTCAAACCAGCCCTATTAGATAATAGCCTCGTTGTGGTTCCAACCCTAGCGGGAGAAGGGAAGGGCTACAGCGGAACTCGGACTTTCTCGGAGCGCCGGGGGTCCGAGGAACGCTCGGGGCCCGCCGTTCCCGCCCTTCTCACGTCGGACCGACTCAGCTGACAGGCCCTGACGTGTTGGATGAGCAGGCCCCCCTGGAAGAGTCCACTGTGTGAGATGGTGCAGCCGAGTGGCAGTCCGGCAGGGGACCAGGACATGCTGGGTGAAGAGTCTTCTCTGGGGAAGCCAGCCATGCTCCACGTGCCTTCAGAGCAGGGCACCCCTGAGACCTTCCAGCGCTGTCTGGAGGAGAATCAAGAGCTCCGAGACGCCATCCGCCAGAGCAACCAGATGCTGCGCGAGCGCTGTGAGGAGCTGCAGCATTTCCAGGGCAACCAGAGGGAGGAGAAGGCCTTCCTCATGCAGAAGTTCCAGGAGGCCCGGGACTTGGTGGTGAGGCTGAGCCTGGAGAAGCGTGAACTGCGCCAGCAGAGGGAGCAGGCCCTGAAGGAGGTGGAGCGCCTGAAGACGTGCCAGCAGCAGATGGCTGAGGACAAGGCCTCAGTGAAAGCCCAGGTAACGTCCTTGCTGGGGGAGCTGCAAGAGAGCCAGAGTCGCTTGGAGGCTGCCACTAAGGAGCGCCAGGCTTTGGAGAGCAGGGCCCGGGTGGCCAGCGAAAAGGCCCGGCAGCTGGAGAGCGAGCGGGAGGCACTGGAACAGCGGCACAGCGTGCAGGTGGACCAGCTTGTTCTGCAGAACGAAAGCATGGAAGCTGCCCTGCGCATGGAACGGCAGGCCGCCTCGGAGGAGAAGCGGAAGCTGGCCCAGCTGCAGGTGGCCTATCACCAGCTCTTCCAAGAGTATGACAATCACATGAAGAGCAGCATGGTGAGCAGTGAGCGGAACCGAGGACTGCAGCTGGAGGATCTCAAGCAGCAGCTCCAGCAGGCTGAGGAGGCCCTGGTGGCCAAACAGGAAGTGATCGACAAGCTGAAGGAGGAGGCGGAACAGCACAAGATTGTGATGGAGACTGTCCCAGTGCTAAAAGCCCAGGCGGATATCTACAAGGCAGACTTCCAGGCCGAGAGGCAGGCCCGGGAGAAGCTGGCTGAGAAGAAGGAATTCCTGCAAGAACAGCTGGAGCAGCTGCAGAGGGAATACAGCAGGCTCAAGACCAGCTGTCAGGAGTCAGCCAGGATTGAAGACATGAGGAAGCGGCACGTTGAGGTCTCCCAGCCCCCCTTAGCCCCTGGCCCAGCTCATCACTCCTTTCACCTGAACCCGTCCAGCCAGAGGAGAAGCCCCCCTGACGAGCCGCCCAAGTTCTGCTGCCCCAAGTGTCAGTATCAGGCTCCTGACATAGACACCCTGCAGATACACGTCATGGAGTGCATCGAGTAGGGCTGCAGGCCGCCAGGCAGCCCAGGACAGTGCTCTCTGCTGCTTTCCTCTCCTGTCTGCCTGGGCCTGAACTAGGGGCAGCTGACACAGAGTGGGTGCCCTCTCTGAACCCCGAGACCTAGCCGCAGGCCCCCATGCTTCCACACCCTCGTCCACGGGTTCCCATCTCTTAGGGCAACACGGAGCCCCAGCGAGGCCCACCACTGTGCTCTTTTGTTTTGTTCTGTATGCCTGAGCTGCTTGGCTCTGGGGTTCCCACTTTTTCCACCTGTGCTGGGAAGGTCACGAGCCACAGCTGGGGCTCCCGGACACCAGCTTCCCAGGCTGAGGTGGGCAGAGCCTTCCTCCCAGCCACCTGGCACAGCGCCCAGGGCACAGGTCTTGTAAGCTGGGTGCTGTTCCCTTGGCGGCTGCAGCACATTGGACTGATGCTGTCTGTTACTAATGGACATTGGGGTTGTCACTGTGGTACAAAATCTTTGTGCATCTCTCATACGTACCTTGGGTTGGATCCTTCGAAGTGGCACCATTGAGTATCCACCAGGGCTAGACAGCACTGAGGCCCCTACCCTGGTGTGGCTTCCTGCTCTCCCAACAGCTCTGCCACGGGTGATGGTGTCCAAGAGTGGCGGGGGCGGGGGGGCTTGTGCCCATCCCACAAGGTGAGCTCCTCTCTGTTAAGAGTAAGCTTGACTTATCTCTTCAGAGCTTGAAGGGTCCTTTTCAGTTCTGGTATAAATGGCCTGCTTGGATTTTTTTACCTATTTTTCTACTGGGCAGTTAGTCTTTTATTCCTTGACTTACAAGAGCTCTTTGGTCATTAGGGGGATGGACTCTTCGTGTGTGATGTAACCCATGGTTATCTCTTCCTCCTGACTTGGTACCGGTGTGTTTGCACTGGAGCCTGTTCTCTTGTTGTTTTGTTTATCCTGCACAGCTTCGGATTTAGTGTTGTCACCACCTCTTGGTCTGAGGAGGTGTGCATGCCACAGGTACACTTGCCCCATGCTGTCTGATGCTGCAGTGCACCCTGGTCCTCCCCAGGAGCGCTGCCACCAAAGTCTGTGATGCTGTTCCCTATGCCAGCCCCAGATGCCCCAGCCTGGCCAACAGAAGCCACTTCACCATCTCTGGCAGAGTACCAACACCAGAGAACTCTCTTACAGTTTTGCAAGAATCTGGATATTTCCGAGGATGTCAACGCTGTGGGCATCAACCCTGTAATTGTGGTTTCCTTCTCAGCGCCCAGCATCCCTCTGTGCCCCGGGGGCTGCCTGGTTGGAAATGGGATGACACAGATCCCTGTCCCTGGGTTTTGTGCGGGACCCCTGCTATCTGGCAGTGCCAGGGTGGACTAGGATTGGGATATCAGTCTGGCTAGATGAAGGCCCAGCCAGTATCCTGTTCTGAAAACAAGCCTGGGCTGGGGGCTTTCTTGTCATCTGCAGGGGTAGACTGATCTACTTCCTGAAGCCCAGTGTTCAGTTGCAAATGGTCCTTCAGGAACGTGTTAAAGGCACAGATAGGTTCTCTGCTCATGGATGCTCTTTCAAACTGTATCCTGCAACTTTTCTACAAGAGCACTTGCCATTTTGGGGGAGTGTATTAGTTTCCTGTTGTTGCTGGAGCAGGTGACTTAGACCTGGAGCAGGTGACTTAGGAGGCCTAAGTCTGAAATCCAGGTGTGGGCAGGCTTTGTTCCTTCTAGAGGCCTCTCTCCCAGCTCTCAGTGGTCTTCCTCAGTGTTCCTTGGCAGGTGGACGTGTCTCTCCAGCATCTGCCTCTGTCTCTACATGGTCTCCTCCACTTTTTCTTCTCTTTCAAGGACACTTACTGGATTTGGAGCTCCCCCCCGCCCTGCCCTGAGTCATCCAGGATGACCTCGTCTCCAGATGCTTGCTTTCATCGCATCTACAAAGACCCTTTTTCCAAGTAAGATCACAGTCACACATTCTGGGGGTCAGGACGTGTGCATCTGTGTTGGTCACCGTTCAGCCCAGCACAGGGTCATCTTCTGGTGCCCACAGATGAGGGCAGATGCGTTTGAAGGCAGGCATCTCTGGGATTGGCAGCTCTGATGGAGGGCTTATTCCCTGGGGTGATGGTGACTGCTGTGCTCTGCAGAGGCAGGTAACAACTGTAGTGAGGAAAAATGGAGTTGGGAGTGGGGTAGGTGCTTGCAGGCTCGGGGACTGTTGAGCCTCAGACCCTTCATCTCCAGCTGGACACCGCTGCTGGGGCTGACGCACATGGCTAGGAAAAAGAAAGGGTGGCTCTGTTGGACCACTTGCATCCTGGGTGGTGGCTCCTGGCTGGGTAGGGATTGGTTTAGTGCTTCTAAGATGATGACACATATACACCAGAGTGCTTCTCTGACCAGCTCCCTCCTCTGAAAGGGGGCTGAAGGAAGGGGAGACCCCAGAGTGGTGCGAGGTGGACATTCACTGCCCCCCACAACCCAGGAGCATTGCTGCGGCTCGGGCAGAGGCCCCCACCTAGGCAGCACAGTGGCTGTAGTGGGAGCTTCACACACGTTCCACCTCTGCCCCAAAGCAGCTGCTTTGGGGCTGGCTGGGGACTGGGCGCCGGCCAGGACCCACTGCTGTCTGGAACCTTCTCTTCCTGCAGGCTGGGCACCCACCTCCCATGGGGCCCACAGGATGTGAGAGACTGAAGGTTTTCAACCACCCTTCTGAAACAAGGGGGTGGATTCCTCCTGTGAGGGAAGCAGGTGGCCCCTGGACCCTCACGACCGTGGGTTTGGGTGGTGGAGATGGACAGATAGGACCTCCATGTTGGCATTGCCCATTGCTTCCACACACCCTGCTCCATTACCTGGTTAAGAGAATGCACGTTAAGAGCAATCAAATAAGCACAATACAAAAGCATTTCTTCCTCATGAATGACTAGAACAACATAGACTCAAACTAGACAAAAAGTGATGTCAAAATGGCAACAAACGCTGACTTCCAGTGCCCTGTTGACAATGCGTGGGGACCCACTGCCATGGGGCTGGTCGGGTGGGATGGACAAGCACATAGGGAGTGTCCCAGCCTCCTTAAATCTGCGACTTCGGCACTGTCAGGGTGCTGGCTGCAGCAGCCATCTGTAGCCACCAAAGGCTGTGGAGTAGGAGGCAGCACTTCTGGAGCCGTGGCTACCTCATCACCTGGAACCCACTCTGGAGCACGTGGGTGTGAAAAAGCCAACAGACATAGCGATATATGAAGTGTGACCCCAATAAAAGGAGAACTGTTGTGTGTGCGCTGTTACCGTTTGGATGGCTGTGGTGGTAGGATTACCAGTGATTAAGTTTGCCTTATGTGTTTTATGTATTTTCTGGATGCATATCATTTGCATGTATTACTTTGATAGAGAATGTATGTTACTGTGAACTTGGTCCGGGGTGGGAGCAGCCAAGAGATTTGCCTGCGAGTGGCTGGCAGCAGGTGGTACGAGGGCAGACTCCTTGTTTCTGAGCTGTGTGTGTATACTTTGGAGGGGGGTTGCTGCAAACAACAGAAACGTATTGTTTCCCAGTCGTGGAGGCCGGAAGTCCACGATCCAGGACTGGGCAGGGTCAGTTTCTCCTGATGGCCGTGAGAGAGGGTGTGTTCCAGGCCTCTCTCCTGGGATGGGAGAGGCCGTCTGCGCCCTGTGTCTTCACGTTATCTTTCCTCTGTGCATGTCTGCATCTCCAAGTGTCCCCTTTTATAAGGACACAGTCCCATTGGATTAGGGCCACCCTCGTGACCTCCCTTTAACTCAATCACCCCTGAGAAGACCCAGTGTCCACATGCAGTGGGTGGCATCCTCAGGGCCTGCGGTGAGGGCTGCCCAGTGTCTTCTTGGAGGGGACACATTTCCACCCATAATGTGGGATGCCTAAC EMBV3_35164 GTACACACAGTCCCACAGGATACCATCGGCCTCACTATAAATGAAGGTGCAGGTAAAACT Gene GeneID:530414|AGPAT5:NM_001075932:8_cdna UTR3_Alt 3 NULL GeneID:530414 27 GENE AGPAT5 MGC142713 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) EMBV3_02808 AGGAGATCCCTGCCCCAGAACAAAGATTCCAGGCACTTACAGCCTTTATCCTCACTGGTA Gene BVV0102_138863 + 0 NULL GK000011.2:102961172-102991701 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14092 CCATGGTCATTGGAGGTTATGCTGATGGAGAGAGCTTCCTGGGTTATGTGGACATGCTTG Gene GeneID:506203|PSMB4:NM_001034266:61_cdna Constitutive 2 NULL GeneID:506203 3 GENE PSMB4 MGC127020 proteasome (prosome, macropain) subunit, beta type, 4 EMBV3_34569 AGGAGTGTGTGAAGATGGCCCACCGAGCAGGTACCTGACCCGCTGGTCTCCCCGCTCCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27725 AGGAAGCCCCAAGGCTCCGTTTCCCTCTCCAGGAGGTGGGGACGTTGGGAATGCCACATT Gene BVT0102_032428 + 0 NULL GK000017.2:73165742-73195614 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078260 1 XLOC_047260 Coding TCONS_00078260 XLOC_047260 Coding Coding ZNF70 17:73192297-73200540 = TSS58268 5029 1 TCONS_00078260_3 453 2 0.390075224460082 2.91355197893591e-06 1.9980978912012e-06 8.64860450782912e-05 3.38507078094221e-05 0.000146377671215165 1.83748905727969e-05 1.69110375323497e-05 0 2.20334305642346e-05 2.8144456575828e-05 2.65531489153656e-07 7.90013665394121e-08 1.90182397539805e-07 1.03930446001271e-07 7.08976368713027e-06 8.27164459204942e-05 9.4087334705889e-05 7.48384524786498e-06 1.58038954743734e-05 7.29295537981384e-05 2.41458159944965e-06 3.0741152731156e-06 1.82423032112817e-06 1.7757800017498e-05 2.75541495978374e-06 3.50242380349241e-05 7.37879098855132e-06 0 1.60887220220441e-06 2.391031292101e-06 NM_001206412.1 ZNF70 Bos taurus zinc finger protein 70 (ZNF70), mRNA. 0.0 9063 99.98 0.999801153310797 NM_021916.2 ZNF70 Homo sapiens zinc finger protein 70 (ZNF70), mRNA. 0.0 1031 74.95 0.308013521574866 TCONS_00078260_3 sp|Q9UC06|ZNF70_HUMAN ZNF70_HUMAN Zinc finger protein 70; 0.0 712 78.35 0.986754966887417 7 coding 0 0 0 0 -0.00650847110419162 0.953463908967022 -0.0225965155784576 0.737369597595632 GGAGAGCGGCCACCTGTCCCTCTGGGGGCGCAGGTGTGGGCGGCCCCCGGCGCTGGGAGCAGGTGCGGGGCCGCGGCCGCTCGTGAGCCTCCAGCCCGGAGGACGGGCCCCGGGGGCCGGCCCGGTGCCCAGGCCCTGGGAGCCCCGGAGGACAGAGTGACAGAGGCCGGAGGAGCCGGGAAGGCCCGAGAGAGAATCCGAGAGCAGCTGTGTGTGTCCCAGACAGACCCAGCCGCTGGGATGACGGGCCCCTCTGTGGAGATCCCCCCGGCCGCCAAGCTGGGTGAGGCTTTCGTGTTTGCCGGCGGGCTGGACATGCAGGCAGACCTGTTCGCGGAGGAGGACCTGGGGGCCCCCTTTCTTCAGGGGAGGGCTCTGGAGCAGATGGCCGTCATCTACAAGGAGATCCCTCTCGGGGAGCAAGGCGGGGAGCAGGACGATTACCGGGGGGACTTCGATCTGTGCTCCAGCCCCGTTCCGCCTCAGAGCATCCCCCCGGGAGACAGGGCCCAGGACGATGAGCTGTTCGGCCCGACCTTCCTCCAGAAATCAGACCCGACTGCGTACCGGATCACGGGCAGCGGGGAAGCTGCCGATGCGCCTGCCAGGGAGGCGGTGGGCAGGGGTGACTTGGGGCTGCAGGGGCCGCCCAGGACCGCGCAGCCCGCCAAGCCCTACGCGTGTCGGGAGTGCGGCAAGGCCTTCAGCCAGAGCTCGCACCTGCTCCGGCACCTGGTGATTCACACCGGGGAGAAGCCGTATGAGTGCGGCGAGTGCGGCAAGGCCTTCAGCCAGAGCTCGCACCTGCTCCGGCACCAGGCCATCCACACCGGGGAGAAGCCGTACGAGTGCGGCGAGTGCGGCAAGGCCTTCCGGCAGAGCTCGGCCCTGGCGCAGCACGCGAAGACGCACAGCGGGAGGCGGCCGTACGCCTGCCGCGAGTGCGGCAAGGACTTCAGCCGCAGCTCCAGCCTGCGCAAGCACGAGCGCATCCACACCGGGGAGAAGCCCTACGCGTGCCAGGAGTGCGGCAAGGCCTTCAACCAGAGCTCGGGCCTGAGCCAGCACCGCAAGATCCACTCGCTGCAGAGGCCGCACGCCTGCGAGCTGTGCGGGAAGGCCTTCTGCCACCGCTCGCACCTGCTGCGGCACCAGCGCGTCCACACGGGCAAGAAGCCGTACGCCTGCGCGGACTGCGGCAAGGCCTTCAGCCAGAGCTCCAACCTCATCGAGCACCGCAAGACGCACACGGGCGAGAGGCCCTACCGGTGCCACAAGTGCGGCAAGGCCTTCAGCCAGAGCTCGGCGCTCATCGAGCACCAGCGCACCCACACGGGCGAGAGGCCTTACGAGTGCGGCCAGTGCGGCAAGGCCTTCCGCCACAGCTCGGCGCTCATCCAGCACCAGCGCACGCACACGGGCCGCAAGCCCTACGTGTGCAACGAGTGCGGCAAGGCCTTCCGCCACCGCTCGGCGCTCATCGAGCACTACAAGACGCACACGCGCGAGCGGCCCTACGAGTGCAACCGCTGCGGCAAGGCCTTCCGGGGCAGCTCGCACCTCCTCCGCCACCAGAAGGTCCACGCGGCGGACAAGCTCTAGGGTCCGCCCGGGGCGAGGGCACGCCGGCCCTGGCGCCCCCGGCCCAGCGGGTGGACCTGGGGGGCCAGCCGGACGGCGGAATCCCGGCCGGCTCTTCTCTGCTGTGACCCCGGGGGGTTGGTTTTGCCCTCCATTCGCTTTTTCTAAAGTGCAGACGAATACACGTCAGAGGGACGAAGTGGGGTTAAGCCCCCGGGAGACGTCCGGCGAGCGCTAACCTCAGACACTTGCAGAAGTGAAGCGGACTCGCAGCCCGTACAGCCCGGGGAAGATGAGTCCAAAGTCGAGGGTCACCTTGGACACTGCAGGGTCGCTCGGCGGTGGGGCGGAGCGGGTGCAGGAGGGCTCCTCCTGGGCTTGGGGTGGCAGGCGAGGACCCCGCGCCTCTCAGCCCTCGGCCTGGGTTGGCTGAGGGCGGGCCTGGCTGTAGGCCCTCCAGCGGAGGTGGAGGCGCTGCCCGGCTCAGCCAGGCACAGGACCCTGCCACGAGGAGTAGCCCTCCGCCAGACCCAGGGTCCAGGCTGGGGCGCCTGCGGGGCCTCCGTTCTGTGCCTGGGCAGCCTGCGCCCTGTCCAGGGATGAAGGGGTTCCGGTCTGAAGGGCTGGGTTCAGGGTCCAGCTCTGGCCCCTCCTGCCTTGGTGTCCTGGAGGAAGCCCCAAGGCTCCGTTTCCCTCTCCAGGAGGTGGGGACGTTGGGAATGCCACATTCCCCTGGGGGGTGTGTGTGTGTGTTCAAGGCTCCCATTCAGACTGGGACTGGGCACTCACGAGCTTTGGCAACTGGCAACTGAGGACGGAGACCCAGGGTGACACCCCACCTCCTGCTGCGGCCCCCCCGGCAGGGGAGACACAGGCCCGTCTGGTTCCCAAGATGGCAGGGCCCCTCCCCCTCCAGCTTGTGCCCTGGGTGTGGTGCCTGGGGCTACAGCGACCCTTTCCGGTTCCCCGGGCCAGTTCAGCTGGGCATCCTCAGGGCGGGGCTCTGAGGGTGCCATGTTTCCAGAGCTCCTCCTCCTCCCACCAGTAGCAGGCGGGCGGCCAGCTCCCAGGCAGCCCCCTGGCATCGCCTAGGTACACACCTGCCCGCTGTGACCCAGCAAGGCTTGAAGGTGGCCATCCCAGTTAAGTCCCCTGCCCCTGGCCCAGGAATGGGCTCGGGCAGGGCCGCATCTGGCTGCCCCAGAAGCGTCTGTCCCTGGCCTCTGGGAGTTGGCGGTGGTCTCTGGTACTGTCCCTCGCAGGGCCCCTTAGCACTGCTCGGGGAGGAGGTGGGCTGAACTGATTTTGAAGTTTTACATGTCTGCGGCCGCAGTCCTACGAGCCCGTCAGGGTCATGCTGGTTATTTCAGCAGATGGGGCTTGGCTCGGCAGCTAGGATGGTCCTGAATAAAAATGGGAAGGCCAGAGCTGTTCCTCCATCAGCAGGCTTGGCAGCTGGGGACGTTGAAAGGACAGGTCTGCTGGTCTGGGGAGACCAGCTCTGTGCAGCCCCTGCTGTCCGTGGGGGTACTAAACCAGCCCCTGTGTGCGCCCATCTGAGTGGCAGCCCGCCTGGAGGATCGCCCATCACTTGTGAGAATTGAGAGAATGCTGACACCCCCGCTTGGTGCAGGGGGACAGGGCCCCCTAAGATCTACCTCCTTGCCCCACCCCCGGGACCCCCTCAGCCTTGGCCAGGACTGTCCTTACTGGGCAGGGCAGTCATCCACTTCCAACCTTTGCCGTCTCCTCCGCGCGCTGTGCTCCCAGCCAAATTGTTTTATTTTTTTCCAAGCATCACTTTGCACACGTCACCACTCTCCTTAAAACCACCCTTCCGGAGTCTCCTGCTCGTAAATCGCCGGTTTCAGCCAACCTGGGTCGCCCCCCAAGCCCAGCAAGCCTGCCGAGCCCCGCGCCTCCCAGCTACTTCACGCTCGCCTCAAGCTTCTAAACGCGGACCTTCTCCCCCCCACCCCCATCCCTTTCTTTTCTGATTTATGTAACACGGCAGGTAAGACTCCTCTCCTGAAGGGTTGACAGACTCACACAAAACCGTGGTCAGACCAGGCAAGTGCTTTTTTTCAGAAGTGTGAGCGGAACCTAGTCTTCAGCTCATGCTCTTTCCTTGTTTTCTTATGTGTTCTAAGTCCTTTGACTTGGGCTCCCAGACAGCGACGTTGTAAGAGGCCGTCCTGGTAGCATTTGAATTGTCCTCGAGTTTCGTTGTCGGATTTTGTTTTATTGTCTTAGTTTTCCCTTCTTTTAGCAGACGTTGTTGACTGTCGTAAAGCTCCAGTTCTTGGTTCTGTTTACTAATCGAATTGTTTTGTCAAAGTACATGTATTCTGCTCTTTTCTTTATCTTTTTGTTGCTTAATATTAACACTTTACATTTCTAAGATTAATTATTTAGGTAATTAATAATTTTTAACATTTCTAGTAAACGTGGGTACTTGGGTCTGTGTTTGTTTTCTTGTAGTTACAGCTTTTTCTGCTCTATACTGTTGACGTCTGGGTTTTTTTTTGCTCTTAGGAATTTCCCTTTGACCCCATTATTATTATCTTAATTAGTATTTTTTAATAATTAAAAATTAGTGTTTTTAAATTAACCCTAATCCTAACCCCAGTGATGACTGCTTCAGTCATTGCTGTTACTTATTATGTGCTGGTGTCAGGATTTTTAAGTGTCCATAGACATTCTCTGAGCCTGAATATATTATCAGTTTTATACAGCATTTGTGTACTCTCAAGAAACGTGTTTTCACTCTGTCAGTTCGGTTTGTTACCTCAGTCTTTATGTTATTTTGCTCCAGTCTGCACTTGCTCTAACTTGTCTTCCCTTCGAGGTGTGAGGACGCCTGGCAGCCGGTGAGCATGCCGGGGTCCGGGGTCGTGGGCCCAGGCGCCCAGCAAAGCCCTGTGGGTGTGTGCACGGCTGGGCTGCTCCGGGAGGAAGCCTGTGGCCCCACGGTAGTTAGGAGCGCTGGTTTACCTGGTCACACCACGGTCTGGTTTTGTGTGCTTTTCCCTGACGTGTTTCTGTTTTGCCTTGGTTTCTATTCTGTTTTATGAGTGCCATTACGCTTTGTTAGTCATGCCGTTATCTCGATAGACAGGGTGTACGTGATCAAGTGATTACCGTATTTGGAGCAGATGTCTATTTAACAGAGATGAACTGAGAACCTGTGCCTTTGCATGCCCTCTTTGCCTCTTTTAATGCTTCTAGCTTCAACTTCTCTTTTCCAAACATTATAATGGAAACCCCTTGCTTTTTTTTTTTTTTAATTTGCATTTGCATGAGAGTTTATTTAGCTCGGCATTTTATTTTTAAAATTTGTGTATATATTTTTGCTATATATCTGTAACTTATAAACAGCAAATTATTGGATTTTGCTTTCTGATTCTTTCTGTAATTCTTCTTACATAAGAAGTTCTCCTATGAGTAA EMBV3_31366 TAGCTGCGTCAGCACTTCCTTGAGCTGTATTTCTGTTAGCGATTGTTGGTGGCCAGGGCT Gene BVV0102_249693 + 0 NULL GK000019.2:54104214-54141196 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38408 ACCACTTCTTACTAAGTCCAAAACAGGCAGTGTGTCCCTCAGCATTAGAGCTGATGACTG Gene BVV0102_034713 + 0 NULL GK000009.2:41554002-41666966 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15443 GAGATCTTCCAGCTCCTGAGGAACATGCAGAAACTCAAACAGAAGAATCAACAGCTGAAG Variant GeneID:613879|MED30:NM_001079618:79_cdna 321^697 2 EMBV3_34383 GeneID:613879 14 GENE MED30 THRAP6 Trap25 mediator complex subunit 30 EMBV3_31069 AGGGAGAGGAATATTTCAGGAAACAGGGAATGGCTACCAGTGTGGACTGTGGCAGAGACA Gene BVT0101_020629 + 0 NULL GK000013.2:51392114-51409981 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35645 CCTGGGACTGCGAGGTTGCTGGCCTGAACAAGTGTGCTTTTTGGTTTTCACCATGACCAA Gene GeneID:540151|SLC10A4:NM_001078025:134_cdna Constitutive 0 NULL GeneID:540151 6 GENE SLC10A4 MGC151597 solute carrier family 10 (sodium/bile acid cotransporter family), member 4 EMBV3_25957 TCAGCCAGCGTTACCAGAAATTCGCCTTGCCCCAGTATCTCAAGACTGTTTATCAGCATC Gene GeneID:282209|CSN1S2:NM_174528:17_cdna Constitutive 0 NULL GeneID:282209 6 GENE CSN1S2 NULL casein alpha-S2 EMBV3_26559 GTTCCCTGTGCTATACAGGTAAGACCATGTTGTTTCATGTCAGTTTCTTAGTGTTTGACA Gene BVV0102_042619 - 0 NULL GK000019.2:21188065-21308164 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02170 CCGTGCTCCACAAGAGAAGACTCCACACCGCATCTGGAGAAAGCACTCACACTACAACTA Gene BVV0102_078610 + 0 NULL GK000024.2:37313655-37318008 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138899 TCONS_00138903 TCONS_00138900 TCONS_00138898 TCONS_00138902 TCONS_00138905 1 XLOC_084766 Coding TCONS_00138902 XLOC_084766 Coding Coding NDC80 24:37280084-37315790 j TSS104001 4414 1 TCONS_00138902_3 611 0.287041232442229 16 0.876823974233301 0.000785356487425651 0.00153537056817281 0.00100057572790925 0.000663633075380426 0.000618495034977239 0.000294019417646961 0.000289968397849801 6.96087626579393e-05 0.000578847507266682 1.21319796255798e-80 6.35240276612181e-21 7.35838956800674e-06 2.56309843735041e-08 8.14927904987647e-09 2.02837533885381e-08 0.00115241726501168 1.3341550599594e-66 0.00147450896203194 0.000629316219738896 0.00115532156895374 2.93514922954922e-35 0.00016393633689636 0.000655852179289326 0.00150957221019975 1.89692785023507e-31 0.00120271118387855 0.000107969989189043 9.02020763435741e-53 1.68006018701352e-05 0.000250617675055605 NM_001206583.1 NDC80 Bos taurus NDC80 homolog, kinetochore complex component (S. cerevisiae) (NDC80), mRNA. 0.0 2827 100.00 0.354780244676031 NM_006101.2 NDC80 Homo sapiens NDC80 kinetochore complex component (NDC80), mRNA. 0.0 2251 91.05 0.363615768010874 TCONS_00138902_3 sp|O14777|NDC80_HUMAN NDC80_HUMAN Kinetochore protein NDC80 homolog; 0.0 1141 86.45 0.998363338788871 1 coding 0 0 0 0 -0.723538889663594 0.00260426685607289 0.0118966175095495 0.814219786815752 GAGATTTTAAAATTCGAAAGGCGGCGGCGGGTGGAAGGAGTTTGTGTTTTGGCGGCTGCTATCCTGTCCAGCGGGCAGTTGCAGGGTTTACAGCAATTCGGTCTTTGGATCGTCTCGGGAAGCTGGAAGAAAGGTCATAAGCATGAAACGCAGTTCAGTTTCCACCGGTGGTGCTGGCCGCCTGTCTATGCAGGAATTAAGATCCCAGGACTTAAATAAACCAGGTCTCCATACCCCTCAAACCAAAGAGAAATCAACCTTTGGAAAATTGAACATAAACAGACCCACATCTGAAAGAAAAACCTCTGTATTTGGTAAAAGAACTAGTGGACCTGGATCCCGGAATAGTCAGTTTGGTATATTTTCCACTTCTGAAAAAATCAAGGACCCAAGACCACTTAATGACAAAGCATTTATTCAGCAATGTATTCGACAGCTCTGTGAGTTTCTTTCAGAAAACGGTTATGCATATAGTGTATCCATGAAATCTCTACAAGCTCCTTCTGTTAAAGACTTCCTGAAGATCTTCACTTTTCTTTATGGCTTCCTCTGCCCTTCGTATGAACTTCCTGACACAAAGTTTGAAGAAGAGGTTCCAAGAATCTTTAGAGATCTTGGGTATCCTTTTGCATTATCGAAAAGCTCCATGTATACAGTGGGGGCCCCTCATACGTGGCCTCACATTGTGGCAGCCTTGGTTTGGCTAATAGACTGCATCAAGTTACATAATGCCATGAAAGAAAGCTCACCTTTATTTGATGATGGACAGCCTTGGGGAGAAGAAACTGAAGATGGAATTATGCATAATAAGCTGTTTTTGGACTACACCATAAAATGCTATGAAAGTTTCATGACTGGTGCCGACAGCTTTGAGGAGATGAATGCAGAGCTGCAGTCCAAGCTGAAGGATTTATTTAACGTAGATGCTTCCAAGCTGGAATCATTAGCAGCAAAAAACAGAGCATTGAATGAACAAATTGCAAGATTGGAGCAAGAAAGAGAAAAAGAACCGAATCGTCTAGAGTCATTGAGAAAATTGAAAACTTCTTTACAAGCAGATGTTCAGAAGTATCAGGCATACATGAGCAATTTGGAGTCTCATTCAGCCATTCTTGACCAGAAATTGAATGGTCTCGATGAAGAAATTTCTAGAGTAGAACTAGAATGTGAAACAATGAAACAGGAGAATTCTCGACTACAGAATATTGTTGACAACCAGAAGTACTCGGTTGCAGACGTTGAGAGAATAAATCATGAAAGAAATGAATTGCAGCAGACCATTAATAAATTAACCAAGGACCTAGAGGCTGAACAGCAGCAGTTGTGGAATGAGGAGCTGAAATATGCCCGAGGCAAAGAGGCGATTGAAACACAATTAACAGAGTATCATAAATTGGCTAGAAAATTAAAACTTATCCCTAAGGGTGCTGAAAATTCCAAAGGTTATGACTTTGAAATTAAGTTTAATCCTGACGCTGGTGCCAACTGCCTTGTCAAATACAGAGCTCAAGTTTATGCACCACTCAAGGAACTGTTGAACCAAACTGAAGAAGAAATTAATAAAGCTCTAAATAAAAAGATGGGTTTAGAGGATACTTTAGAACAAGAAGCTGAGGAAGAGGACAAAAAATGTGCCGATGAGCTGGAGTCCTTGGAGAAACACAAGCACCTGCTGGAGAGCGCAGTTAACGAGGGCCTCAGTGAGGCTGTGAATGAGTTAGACGCTATTCAGCGGGAATACCAACTAGTCGTGCAGACCACAACTGAAGAGAGACGGAAAGTGGGAAATAACTTGCAGCGTCTTTTAGAGATGGTTGCTATACATGTCGGGTCTGTGGAGAAACACCTTGAGGAGCAGATTGCTAAAAACGATAGAGAGTGTAAAGAATACGCATCTGAAGATCTCTTGGAAAACATCAGAGAGATTGGAGACAAGTACAAGAAGAAAGCTGCTCTAATTCAGGCTCTTGATGAATGAAGATAAAGTATTGATTAAGCAAGAACTTTATTAGCAGTGTAAATTTTGAAACGTCCTTTGTAGGTCTGAAAACTCTTTAGCATATCCTATATCCCTCCTTACAATGAAGTCTCATGACCACATCCTCCCAAGCCCGTGAAGTATTTTTATAGCTTTTCTAAATCTAGTTCATTAACTTAAGATATGTAGAACCTGAAATTATGGTAACTTGTTGGATTGTTATATTTAGATATGAAAGACCAGTTATATTATGTACCTGGAGTTAATAAATTGCCTCAGTGCAGTGTGTTTTTTCCCCTGATTTCTCTGCCTAACTTGACATGGTTAGAAAAATAAGTATTTCGAGTATAAGAATTTTAAAGTATAATTAAACAGGAATCAGCAAACTACATAGGCCAAATCTAATCACACCCATTCATTGATGAGTCATCTGTGACTGCTTTCCCCCTACGAAAGTTTAGGGATTCTCCTGGTAGTCCAGTAGTTGGGACTCTGTGCTTCCAATGCAGGGGGCACAGGTTCAATCCCTGGTTGGGGAACTAGGCTCCTATATGCCACACAGTGTAGCCAAAAAGAAAAAAGAGCAGAATTTATTGTGTGTGACAGATCAGATGGCCTGAAAAGCCAAAAATGTGTACTATCCACCCCTTTACAGAAAGTTTGCCAGCCCCTGGGGTAAACTACACATGTTGACTCTGACTGACTGACTGAAAACCTTTCCTAATCATTCTGGACACATGGTCAGACCCACTCTTTATCCAGAGCTGAGAAACTAAATTTCTGGATCCATGCTGTCTTTACTCTGAATTTTTCAAAGCCGAAGGATGTGGAATGTGAGAATCAGAAGAAACAATCTCGTTTTTTAGAGATGAAAATTTATTCCTAGAGAAGTTCTGACTTACCTCAGGCCATGCCTCTTATTGGCAGAAGCCCCCCTCAACTGGAACCTGTGCTCAATCCTGACCACAGAAGCCCTGAAACATGAATGTTCTGGATGGGGAGGGAGTCACGTTGGAAAGTGAGGTTTTAGGGACTTCCCTAATGGTCCAGTGGTTAAGAATCCGATTTACAGTGCAGGGCATGTGGGTTCGATCCCTGGTTGGGAATCTAAGGTGCCACATACTGTGGGGCAACTAACCCAGCGGCACAACTACTGAAGCCCAAGAGCTCTGGAGCCCGTGCTCCACAAGAGAAGACTCCACACCGCATCTAGAGAAAGCACTCACACTACAACTAAGAACCCACCCACTGCAGTGAAGTGAAGACCCAGAATAATTTTTTTAAGAAGAAGCTTCTTCGACAGGTCTAAATTGTTGGGAATCTCCTTGAAGTGGCATCCGCCTCCAGTTGAACTTTCTATTCTTTGTATTCCAACTCTAATGCAAATCAGAGTGAAAAGCATGATATAATGAAGCATAAGCAGTATATAGAATGAGGCTCAGCAGGTAAAGAATCCGCCTGCAACGCAGGAGACACAAGTTCGATTCCGGGTCAGGAAGATCCCCCAGAGGAAGAAATGGCAACCCACTCCAGTATCATTGCCTAGGAAATCCCATGGACAGAGGGAGCCTGGTGCGCCATAGTCCATGGGGTTGTAAAGAGTTGAACACCATTTAGCAATTAAACACACACATGTACAGAATGGAATGTCTTTTAGGAAGGGCAGGGAGGGGGCATTCAGCCTGGAGTGTCCATTCAAAGACAAGTCATCACTGGGAGATAATTAATAGGTATGGCAAGATTAATGGTTACCAATGTATTCAAGAATCTTGACTCTGACATCTAATAGAACCTTATTCAATGGTGGAAATGTTCTGTCTACACTAACCAGTGTGGTACCAGCCATATGAATCTACTGTGTACTCGGATGATATATATATATATATATGACAAAATGCATACTCAGGGCTGTGCCACTCAGAACATAGTATGGAAACAGCATCAGCATCACTGGGGAGCTCATTAAAAATGCAGACTGTTGGCCCCAGCCCAAACCTACTAAATCAGAATCTGCACTTTTTGCTGTGTATTGACACAGACTTAAACTTTTCCTAAGTTCTGGCGTATATATATATATATATATATATATATGTATCCTTCCATAAAATCATCCTCACAAGCTAATGAATATATCCATCACTGCTTAAGTTCCCTTGTGGCCCTTTGCAGTCCTTCGTCTTGCCCCTGCCTGACACCCCTCCCCAGGCAAACACTGATCTGCTTTCTGTTACTTTAGTTTGCATTTTCTATAAACAATCATTTTTGTTTCATAAAGCTGAGAGGTCCATGTTGCGATAGTTCATACCTTTTCATTGATGAGTAGTGTTCCATTGTATTTATTGAGTTTGTTTATTCATTTACCTGTTGATGGACATTTGGATTGTTTATAGTTTGGGCTATTTTATAAATAAAGTCATTATGAGCTTTCATGTACAG EMBV3_30410 CCCTCGGGATCTGGATGGAGTGCCTGTGACATCAGAGAAGGCAACCAAAATGGATGTTGT Gene GeneID:506936|RPUSD2:XM_002690820:65_cdna Constitutive 0 NULL GeneID:506936 10 GENE RPUSD2 NULL RNA pseudouridylate synthase domain containing 2 EMBV3_23509 ACGGGCGGCTGGTGGAGAAGACGACGTACGACCACGTGACCAGAGAGAAGTTGGACCGTA Variant GeneID:511988|TRUB2:NM_001110073:67_cdna 489^686 3 EMBV3_03728 GeneID:511988 11 GENE TRUB2 MGC140821 TruB pseudouridine (psi) synthase homolog 2 (E. coli) EMBV3_40205 AGCTCATCGTGGGGAGATCAGAGGAGGTGATCCCACGCCTAAGAACCCAATACCAGCTGA Gene GeneID:517795|LRTOMT:XM_002693449:116_cdna Constitutive 0 NULL GeneID:517795 15 GENE LRTOMT NULL leucine rich transmembrane and 0-methyltransferase domain containing EMBV3_19841 CTGTTGGGCATATTAATTTTTGGACTGTTTCTGAGTTCTTTATGTTATCCTACTGATGGG Gene GeneID:100296050|LOC100296050:XM_002695442:82_cdna Constitutive 0 NULL GeneID:100296050 18 GENE LOC100296050 NULL similar to zinc finger protein 264 EMBV3_35760 AACTTGAAACATTTGCAGAGAAGTCATATGTCATCTCTTGAGTGACAGATTAGTCATTTA Gene GeneID:534400|CEP120:NM_001078000:20_cdna Constitutive 2 NULL GeneID:534400 7 GENE CEP120 CCDC100 MGC142331 centrosomal protein 120kDa EMBV3_17823 TGCTCATCCAGCTTGCCCGTTCGTGTTTTAATCGTGGCTTTGCACATGGCTGGGACTCAT Gene BVT0101_016786 + 1 EMBV3_16535 GK000009.2:23388200-23400883 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28431 AGAGGTGGGCCCTTGGCTCTGCAGGTATTTTGGGCACAGGGTGTTTCTCAAGAGACTAAT Gene GeneID:508778|DCAKD:NM_001077881:221_cdna Constitutive 0 NULL GeneID:508778 19 GENE DCAKD NULL dephospho-CoA kinase domain containing EMBV3_42777 CAAGCCCTATTCAAAGTTGCAGCTGGCGGAGCTGGAGGGCGAGTTTCTGGTGAACGAGTT Gene GeneID:613573|HOXC12:XM_002687235:100_cdna Constitutive 0 NULL GeneID:613573 5 GENE HOXC12 NULL homeobox C12 EMBV3_33947 GAACTGGTTCATACTGTTGGTATTTGAAACATCCTTCCCGTACTCCATGGGCTGGCACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24187 AATAAGGGAAGCACAGAGGCCCAGGGAGACCCAGCAGACGGTTCCTATATTTTCACAGCA Gene BVV0102_409284 + 0 NULL GK000003.2:117192620-117408827 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01515 CTTACTAAAGATGTGAATGTTTAATGTTCCTTCTCTGTTTCTACTCTGTAGTCCAATGGG Gene BVV0101_052487 + 0 NULL GK000006.2:59611370-59670229 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203248 TCONS_00203247 TCONS_00203246 1 XLOC_124138 Coding TCONS_00203248 XLOC_124138 Coding Coding KLF3 6:59591159-59614937 j TSS152294 5917 1 TCONS_00203248_1 346 0.0216325840797702 6 0.751398410228372 1.92867299540189e-05 3.05676121512969e-05 6.0994288840454e-05 0.000190867862814521 1.13295396720513e-05 1.78615908800314e-12 1.64666124389696e-05 1.53451516306951e-05 1.57529768167257e-205 0.000161715454794178 3.80285310181049e-05 0.000526337821772829 1.06910628605441e-05 7.55536794432892e-61 0.000118132498794287 0.000685083211736945 0.00148462598868897 0.00120576587344148 1.61353181038941e-12 1.7945776103976e-05 3.1808998870729e-05 0.000655866183830681 0.00115925826983474 0.00144915107561948 3.26526719815877e-05 2.00879909266425e-05 2.35133195647459e-05 0.000204373065352471 0.000123864179345149 0.000521846070357446 XM_005207874.1 KLF3 PREDICTED: Bos taurus Kruppel-like factor 3 (basic) (KLF3), 0.0 9133 100.00 0.855670103092783 NM_016531.5 KLF3 Homo sapiens Kruppel-like factor 3 (basic) (KLF3), mRNA. 0.0 5158 82.28 0.871387527463242 TCONS_00203248_1 sp|Q60980|KLF3_MOUSE KLF3_MOUSE Krueppel-like factor 3; 0.0 627 93.64 0.997109826589595 3 coding 0 0 0 1 -0.0286853925567665 0.840131562199883 -0.0273233509972923 0.595940847689611 ATCATCTTTAATCCCACTGTACTGCTCCTACTGGTAGTAAAGGATTCCAGGTAAGGCAAGGGGTACAGATAATAGGAAACTATTGGGATGGTGCGATTATCAAGGGACAGGTCCTGCATGAGATCTCAGACAGGATGAAAGCAGCCATTACTTTTTAAACTGAATTTAGTCTGAGTTTTTTAAGGGTGTGTGTGTTGGGGAGGGGGTGATGTTGACCACTAAGGCTCAATATTCTAGGAAAGAGGCAGGTACTTGACATTGTTCCAGAGATCAGAATCAACAAATTTAGTACTGTGTGTATAGTATTATAGATTCAAAAATTGTGTGCATATTCAGATAAACAAAGTTTTTCTCTTTTTTTGGTTTTATTATTTTTAATCTCATTTAATTTCCCCAAAACTTTTAGGAAGGAGACAAAAGAGGTGCCCTCTGCATTTTGCATGTAAAAAAGGGCCTCCCCGCATCCACTCCCCCATGGAGAGGGTCAAGTACAGATCTCCTGCTTGAGTTTCAAGATCAGAAGTCTTCCACTACACTCCTGAGAATGAGTGCTTTTATTTAGAAGGATTTGCAGCATCTAGTGGAGTGGATGAATCTGCTAAACACCAGAGCACCCTAGAAAGTATAACTAAAAGAATGCTCATGTTTGACCCAGTCCCTGTCAAGCAAGAGGCCATGGACCCTGTCTCGGTGTCATACCCGTCTAATTACATGGAGTCGATGAAGCCCAACAAGTACGGCGTCATCTACTCCACGCCATTGTCGGATAAGTTCTTCCAGACGCCGGAAGGCCTGTCTCACGGGATGCAGATGGAGCCGGTGGACCTCACGGTCAACAAGCGGAGCTCGCCGCCCTCGGCCGGGAACTCGCCGTCCTCCCTGAAGTTCCAGTCCTCCCACAGGCGCGCCTCGCCCGGGCTGAGCCTGCCCTCGTCCAGCCCGCCGGGGAAGAAGTACTCGCCGCCGCCGCCGCCCGGCGTGCAGCCCTTCAGCGTGCCGCTGTCCATGCCGCCGGTGATGGCCGCGGCCCTGTCCCGCCACGGCATCCGGAGCCCGGGCATCCTGCCCGTCATCCAGCCCGTCGTCGTGCAGCCTGTCCCCTTCATGTACACCAGCCACCTCCAGCAGCCGCTCATGGTCTCCTTGTCGGAGGAGATGGAAAATTCCAGTAGTAGCATGCAAGTACCTGTAATTGAATCATATGAGAAGCCTATATTGCAGAAAAAAATTAAAATAGAACCTGGGATCGAACCACAGAGGACAGATTATTATCCCGAAGAAATGTCACCCCCTTTAATGAACTCAGTGTCCCCCCCGCAAGCATTGTTGCAAGAGAATCACCCTTCAGTCATCGTGCAGCCCGGGAAGAGACCTTTACCTGTGGAATCCCCAGACACGCAAAGGAAGCGGAGAATACACAGATGTGATTATGACGGATGCAACAAAGTGTACACTAAAAGCTCTCACTTGAAAGCACACAGAAGAACACATACAGGAGAAAAACCCTACAAATGTACGTGGGAAGGATGCACATGGAAATTTGCTCGGTCTGATGAACTCACAAGACATTTCCGGAAACACACTGGAATCAAACCTTTCCAGTGTCCAGACTGTGACCGCAGCTTCTCCCGCTCCGACCACCTTGCTCTGCACAGGAAGCGCCACATGCTCGTGTGAACACCTCCGCCGCCCGCCTCAGCGTGGCCCCCCACCCTCCAGCTCTCTCTCTATCCTCCTTCCCATCAGCTAACTCATTTTTTACATGTACATTTTAATTTCGATTCAGCTGGTCTGAATCTGAATTTATATCATTCAAACTTCCATATGGTCAGTAGTAAATATCCTCTAATCCTCCCTCCTCTCCTTACCACGGGTCAGACCTAAAGAATGTGAACACTTTTTTTTTTTCTGGGGATGCTAAGCAAACCCTTCTTAGAGATACGTTTAATGTAATGAAAACAAGGGAACATGTAAACTAACATAACCAATTGTCGGTTTCTCCATGTATTCCTCAAGAGAACATCAAAGTAAATGTATTAGACGTACAGTATCCAGCCTGCTAGTCCTTGCCAGAGACATCCAGACCTATGTGCCCTGTGATCATGTTTGGTGCTCCACAGCAAAAAGAATGGCATCAGCTTTCACAGATACCTAGACTTGCAGCCAGCTGTCTGGCTAGTACAGTCAGCTCTTCCATTGTCCTTCACGTATCTGGCTTGTCAACTTGAATTTGTCACTTCATCTAAATGTACATCCTTTAACCTCCTTTGTGCCTGCAGCTACTTGGGAGGTCTTTGCCACCACTGGGAAGGGAGCCAGAGCTGCTGATTTAGGTGGGTGATGTCTGTCAGTTGAGGGGATGGATGCTCTATTTGCCTAGCATGGAGTTGGAGCAAAGAGGCATGGAACAGAAGCAGAGCAGGGTGGGCAGAGGAGGAAGCCATCTATTCCTGCTGGGCAAGGGCTTTCTGGTGAGACTTCATCATTTTGTAGCTGGGCAGAGCATTCAGAGTTTCAGTCTCTCTGCATGTTCAGCTGTGCAGAATCCTATTGCAAAGGACTTCTCCATGCACCTGTCTCCGTTTCTACAATGTCCTTAATGTGGATCACCAAGCGTTGATCATAGGAATGCCACAAAAATATCTGCCCAGAAATGGTAAAAAAAATCTTTTGGGTAAGGATATGAATGGCCTTCTTTTATCCCACCTATTTAATAGCTTTTTTGCAAACAGGAAAACTTTGAGTGGTAATTGTATTCCCCTATCCAATTAATCATGGAACCTTCATATGGAAACTTTTCTGTTTGAGCTGCAAAGTGCCTATTGGCTGTCATCTGTGTTCAAAATACATATCATAAATAAGCGTCTGCTAATGCTTTAATAGATTCCTTCGATCTAAGACCTGAGTGACACTATTTGTAAATATAAATAGTTGTGAAGCACACATACCTTTCTTGATTTCTGAAAAATCTGGAAAACCACAGTTCAGGGATTCATAAATGTAGCTCAAATTCCCAAATGTTTACTGTCAGAGCTGGCGATTTCCTGTCATTATCAAATATCCCATCAGGAAAGAACAAACTGAAAATGACTCGTGTTTATGTTGAAGATTAATAGCACCATTATTTTAGGGGAAGTTTTTCAAAAGCAGGCTTTTGAGCACTATAGTGTAAATGCCAATAAAAATAATCTACGCATAGAAATGCCATTGGTCCTAAATTTGAAGAAAGTGGGCGACGGTGGTCTAGTGTGGGAGCATGTAAGTAAATGCGCATTCATCCCTCGATAAAGGAAGGAGGAGCAGAGAGAAGGACGGAATCCTGAAGATTCATCCCAGCCACAACTCAGGATCCAACGCAACCGTAACTGGGAGGAATATACTGTTCAGTTGTTTTTAAAACACCAGTGCATGAGTGATTCTGGAGGCCTGCGATCGTGTGGGGAGCTTACTTTGATGGCGCCATGTTAATAAAAGTGAGTTGTAGGGACTGCGCACCTAAGAGATCCCGCTTATCAGCCCTCAGATCCAACTGAAAGGAGATGTAGTTGAGAAATGCAGAGTAATTTGTTATGTGGCACTTGGTTTTATTTTCTTTATTTTTTTCTTAAGCACTGCAAAATTTGTTTAGAATATTAAACCATCCTTATGAGGCTTTTTTTTTTTTTTGCAACTATGACGTGAATTGAGGGATTTCTTTTGAAAAATGGCTCTTGGAAAAGTAGGTATTGTCTATATTGTAGATGCTTAGTCACATTCATGCCAAAGTGTCGATAGTTTGAAATGGTTCTTCCACAACACACCGAAGAATAAAGTTGGAGTGCAAAGAACATTTTTTTTTTTTTTAAATGAGCTAACCAGTTTGTGCATGTTCTAACCCATCTTGAGGATGGGAAAAGAGTCAAAAAAGGGTAGAAAGTTGATCTTTGCATAATTAGCTTTGAGTCAAAGTCCAGCTGATAGAAAGCTTCATGGGTTCTCATGAAATTTAATTCGTGTTTGCTATAGCATATTTAAATTTTTTTCAAAAAAGCAAGCAGGACCCTGCAAAGACTTATTACATTAGTATTCAACTGATTAGATATGGTAACAAAGATACACTTCATAACAAGGATACACTTCAACTCTGAAAGTAAAGCAACCCAGGAAGCTTTTTTCTGTTCCCATGCTTGCCTTTATACTTCAGTTACCAATTGGCTGTTAACCAAATTTTCCTTTTTTATATATATTTGTATTTTAATATGATAGTTGAGAAATTTAGTATCTTAGTAATTTTTAGCTGTTATTGTGGAAGACCTCCAAGACAAGATAAGGTACCCTTGAACATGTGGTTTTAATGATATGCCATGTTACTATCAATGGTGATTTTAATTTTTAATATTTTAAATTGATGAGAATGATTTGTAAACATGAAGTTGGTGTTGTATAAATTCTGTTGGTTATAGAATTTCTTTGATGATTATCCAAGTGTCCTCCTGGGGCAGAAGTCAGAAAAATTAAATCTGCAACCATCATAATTTTAGAGTTCTAAAATGTGAACCTATGTCATAAATGGGCATTAACATTCTAAATCACCTGGTTTGGAGAATGTGTTAGCAGCATAGCTATGTTCAACTAAGGAAATGGCTAAATACCAGAAGTTTCCAGAGCCTTGGAACAGATTTACAGGGGAACTCTATATGTATGTGTATATTTTATTAAACACCCATCTGCACTATTCAGTGTTGCACTAATGTGGAATTTGAAAAACTATATTGCTGATACTGTATATCTGCACATCATTCCTGATTAGATTGTTTAAAAGACAATCTCAAAGGTCTAAGGTTTTAAAATAATTTGGTTGGTTTGAAAATACACAGTCATCTTGAAGGAATCACTGTCATGCATGAAGTTGCTCAGAGTGGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTTCTAAATGATTGCAAATTCACTTAAATAATACATTTACAAAGCCATTTTACATGCATTAAACGAGGGCTACAACAATATTATGTTTTACAAATACTAGCACTTTTTTTTTTGCTGTTATGTACTTAGTGTTAGAGGGTCAAAATAATCTTTCTGCTTAGCATCTCTTAAACCATACCTGCAAATATAGCAGGATTATTACATTTACAGTACTTTAATACTTGTATAAACTATGCAGAAATTTTTAATAAAGTGTAATATATTTTATAAGCTAATAAGACTGAATGGGTAAAGGTTTTTAGCATGCATTAGTATACTTGCAAATACTGAAACATTTTGGTAATCTTTCTTACTAAAGATGTGAATGTTTAATGTTCCTTCTCTGTTTCTACTCTGTAGTCCAATGGGAATTCAGTAATGACATTTTGTCATGTCAAACTGTGAACATAAATTTGTACTGTACAGTCCTCATATACTATATACAGTATGCAATATATGTATTATATACTTGTTAATAAAACCATCAGAATATTAAATGTGATCATGTGATTACTATATATACAGTGATCACTAGGAACAAAACTTACTAGCAAAGTAACCTGAAAGAGACCCTTAGTTACAAATTTCAAAGTAAATCATCTTTTAATAGGCAGTCATTAATGGAGGGAAAGAAAAGCAGCTCTAACTGGGGGATACACTATATGAGTTAACTCAACCTTAAAGCTGTGTCCCTGGTCTTCTGATAAGAAATTTTCTAAGTACAAACCATAAACTTGGAGACAAGCCAGTATGAACCTCACCTAGTGCATTCTTGGAATATTTTATTATGATCCTGCTGCTGCTGCAAAGTCGCTTTAGTCTTGTCTGACTCTGTGCAACCCCATAGATGGCAGCCCACCAGGCTCCTCTGTCCCAGGGATTCTCCAGGCAAGAATATTGGAGTGGGTTGCCATTTCCTTCTCCCTATTATGACCCTACCTACCTC EMBV3_40715 AATGTCTGTCAGCTTCGCTTTAACTCGGATAAGAAAAAGGGAAGTTAAAAGGCAGCATTT Variant GeneID:613328|ZNF385B:NM_001083502:41_cdna 545^707 2 EMBV3_24744 GeneID:613328 2 GENE ZNF385B MGC139239 zinc finger protein 385B EMBV3_18712 ACGGTTCCCAGAGAATGCTGAGAATCGCGGAACCAGACGCGAGATTCAGTGGCTTCTACA Gene GeneID:506264|CRIM1:XM_002691280:355_cdna Constitutive 1 NULL GeneID:506264 11 GENE CRIM1 NULL cysteine rich transmembrane BMP regulator 1 (chordin-like) EMBV3_13547 CAGAGTTGTGTTCGGTCCAGTCGCTCAGTCGTGTCCGACTCCTTGCAACCTCATGGACTG Gene GeneID:509625|TERF2IP:NM_001075412:88_cdna Constitutive 2 NULL GeneID:509625 18 GENE TERF2IP MGC140687 telomeric repeat binding factor 2, interacting protein EMBV3_27847 GCCCCGAACTCTGTCGTTCTGTTCCTTTGTTTTTTCCATGCTTGTGAACTGCACAACTTG Gene GeneID:613381|HN1:NM_001034734:23_cdna Constitutive 2 NULL GeneID:613381 19 GENE HN1 MGC127173 hematological and neurological expressed 1 EMBV3_21825 AGGACTGTGTGGTTTGCCAGAATGGGACTGTGAACTGGGTGCTCTTGCCATGTAGACACA Gene GeneID:534344|CGRRF1:XM_002690946:290_cdna Constitutive 0 NULL GeneID:534344 10 GENE CGRRF1 NULL cell growth regulator with ring finger domain 1 EMBV3_09528 GGCTTAACGCCTGTTCTTAAAATAACCATGATCCGTGACACCTGCTCGTTCCTGCAGAGC Gene BVV0102_146605 + 0 NULL GK000024.2:21172170-21198153 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138573 TCONS_00138574 1 XLOC_084684 NonCoding TCONS_00138574 XLOC_084684 NonCoding NonCoding - 24:21172230-21174507 - TSS103811 1846 4 TCONS_00138574_1 69 0.0937161430119177 2 0.189806678383128 0.000523296638746206 0.000188033974963436 0.000344911168494048 0.000115873163153858 0.000240707447435671 1.63713729334513e-05 0 0 3.51883541864304e-31 6.46074382521381e-05 0 0 9.97986573442139e-144 3.77655527487948e-88 5.84314335815783e-05 0 0 0 4.34736617878672e-05 3.31158955276891e-05 1.62271337337859e-82 0 0 0 6.92448514840994e-151 0.000287828047550406 0.000125515531002377 0 5.25959454772726e-06 0 0 noncoding 0 1 0 0 -0.0129762122587154 0.930421615325115 0.0273329782832952 0.575703863904341 CTGCGTCCCCCGCGCGCCAGCAGGGACCCACGCGACTCGCCGCTAGGAACGCGAAAGGGAGAGCGGCTCGCGCAGTATCCGCAGCCCTGGGCCGAGTGCGCTGGCGGAAAGACCCCCGAACCCTCCCCACACACAAAGCTCCGCGGGCAGACCCCGCAGCACGTGCGCCCCGGCCGAGCTGCACCCCTCGGAGCTAGGGGAACCGAGGTGTAGGGCGGGTGGGGGCAGAGCCGTCCTCGGGCATCTTATCCATCTGAAAGCAGGCTTAACTCTTTCCAGATGAAGGCGGCGGCGGCCGGACTCCTGCTGCCTGGATTCGGAAAGCCCCAGCTGGGCACCAGGAGGCGAGGAAGCCCCCCGCCCCACCCCACCCCACCCCACCCCGACAAGCAAGAAAGTAAGCAGGGCTATGGCCAAGGTCGCGGGTACCCTCGTGCCTCATGCAGGTCTCGTGGAATAAACTCAGTGGCTCTCAACATCCGCGTCTAAACAAGCCGACTTTGTGACATGTGGCTCCCCTTCTGGCTTCAAGGGGAAGTAACCCCGCGTCCCACGCTTAGCCTCTTCACGCGCACCTGTGACCTTCCGTTTCCGTGGACCCTCCCCGACGCACGTCCAGGCTTAACGCCTGTTCTTAAAATAACCATGATCCGTGACACCTGCTCGTTCCTGCAGAGCTAGTTCTCTCTGCACGAGTCCTTTAGACAGGCCAGTACATCAACCTCACCATCAGCTCTTGGGCAGAGGCTAAAATCCCATCCGCTCTGAACCCCTGCCTCCTACCCTCCCATTTTCATCACCATTTTCATTTCTCCTCAGTGAGGGAGGCCTCCATTCTTTCTAGCCGCCCCATTTCTCACCTCTGTCCCTACATGAATCCCAGCCCATCAGTGACCTCCATGCTGTATCACTTTCTTGGCCTCAGCTAGCAGGTCCCAAGAATGTTCCCACCCCATCCACTGCTGGCAGCAGCCACTCTAATGACCCACCCCGCTCCTCCCAGGTTTCTCAGCACTGCTCACGGTGGCCCTCCATTCATCTCAGGCTGCCACAAGCTTCTGCCCCTTCACCTACAGATTATTCAATAAAGAAGGTCATGGCTCCAGGGTGAAGTCCTCCCCTTCCCACTCCCCTCCTCTCCATTGGAATGTCCATCTTCCGTCTCCTCCATCTCAAGAGATGACCAAAGCCCTGGTTTTCTTCTTGCTCAAGGCTCTACTTCATCTGGATCCTGAGTCCCTTCCTGGCTCCTCTGGGATCAGCCTGTGTCACTGATCTGGCCTTCTTCTTCCTTCCTTCCTGGGCTCCTTCCCCTTGAGAATCAGGACCAGCCTCCTGGCACACAGCCTGGGCTAATCCTACAGATCCCAGCTCTTAGAAGAGCCCCGCGCTGGTTTCACACTCTGCTATTGTGGTCCTTAAATTCATAACAATGTAACAAGAGGACTGGAAGTTTCATTCTGCATTGGGATCCACAGGTTATACAGCTGGTCCTGATGAGCGTAAATACTCAAGTGTTTTCTCTTAAAAACTACATCTTTATGAAGGCTGCCTCTCCGTGGCTTATCTCTTCTTCACTTCCTGATCAGCTTCTGAAAGCAAGAGCTACATTCATTTCTCAGCATCGTCACCACCTCTTTGCTCCACACCCCAAAACATCTGATGGACAGCCCTCCCTGCTATTCTGAGACCATTAGTGCCATCCTTGTTGCCTCGTTAGGGGGACACCTCAGCCTTGCCATCCACTTTCTCAGCAGCATCTGTCACCATGGACCACACTTTTTTCAAACTCTTTTCTCTCAGCTTCATTAGTTCTACCCATTCTAAGTTCACCTTCTCCCTCTTC TCONS_00139846 r 5' 0 TCONS_00139846 r 5' 0 EMBV3_35278 TGCACTTTGATGAAGCAGTACATTGAGTTCGTGGCAGATAGACTTATGCTGGAGCTGGGC Gene GeneID:508167|RRM2:XM_002691481:368_cdna UTR3_Alt 3 NULL GeneID:508167 11 GENE RRM2 NULL ribonucleotide reductase M2 polypeptide EMBV3_01228 TGTGTTTACAGCCGCTGACGTGTCTGAGAAGCATGTGGTCACTTTTGTGTCCCTCCCTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28952 TACCAGCGTTATGAGATCAAGATGACTAAGGTGTTTCCCTGCTCATCCATCCCCTGCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22834 CCTTCTCGCTCGCGTCAATAAAAATGACCTTCACCAGCTCTCGTGCCCTCTAACTGGATG Gene BVT0102_252270 + 0 NULL GK000016.2:74543194-74551258 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070196 1 XLOC_042157 NonCoding TCONS_00070196 XLOC_042157 NonCoding NonCoding - 16:74544068-74547793 - TSS52174 3338 2 TCONS_00070196_2 97 0.055122828040743 2 0.104189044038668 0.000197683073373974 1.10345353904496e-05 0.000232875577705267 8.20961494999628e-05 2.24010563796552e-05 6.40358107106403e-06 0.000360891754900684 0.000216176213742206 0.000189098775535701 3.69786894376288e-06 2.74318156417616e-06 0.00019460253104766 1.03149787904611e-05 3.24121415261185e-05 3.14393612277408e-06 0 0 0 0.000388727724575752 6.96348093200031e-05 5.49679810933571e-05 0.000352358948836958 0 0 0.000951681505826464 0.000261330037329362 0.000758676873124847 8.63257293381412e-06 0 5.6516085129508e-05 XM_005194910.1 LOC101910110 PREDICTED: Bos taurus potassium voltage-gated channel subfamily H member 1-like (LOC101910110), mRNA. 0.0 787 99.77 0.131216297183942 NM_172362.2 KCNH1 Homo sapiens potassium voltage-gated channel, subfamily H (eag-related), member 1 (KCNH1), transcript variant 1, mRNA. 1e-177 628 70.22 0.398442180946675 0 noncoding 0 0 0 0 -0.159465420342464 0.350337343888214 -0.0340740501121499 0.579902873746965 CAGTGGTGGGGCCACCCGTTCCTCTTCATGTCCCCGGGTTGCAGTCAGACAGCAGAGTTTTGGCAGCGTCCTCAGTTGACCACAAAGATAGTATCAGCTCATTTGCACTTCTGTTGATTGATTCATGCTCCTTTGGACTAAATGACAGATACAAAGGAAGAAGAGAAATCCAATGGAGGATTTGGCAGGACTCAATGGCAAGAGTGTTAATACAAGGAGGAGTCCCAAAATGACGAACCGCTCGTGAGCAGACGTGTCCTCAAAGGACTGGCGAAATGTGGGACAGTCTCTGACGGATGCACACACACAGTGTCTGAATAGTGAGAGTGAATTCATTGGGGGGGGAGGGGGTGCATCTTTCTTCATATAAAAGCAGTTCATATCCTGATAACAAGATCCATGAACATCTCCTTGAATGACTAGTGGATCTGTTGGCTGACTCTGAAGTCACAGATAAAAAGATAGTGGCTCCAAGAAACACTTCCTGGTGGGTAGTGGGGGAGGGCACCCACCGGTCTGGTACCTGTGGGGTAGTCAGGTCCAGTTCTAGAGGTTCCAGAATAAGTCCAATAGGCTCACGTGAGAATGAAGTTTCATTTGAAACTAAGTTAAGCTGGAGGCACAGTCAGTTGAAACATCTCAACATGAACACCCTGGGTGCTGTCTCTGATGGCTGTGGTTCGTGCTGGGGGGACGCTGAGATCTCATCCAGTTAGAGGGCACGAGAGCTGGTGAAGGTCATTTTTATTGACGCGAGCGAGAAGGCAGTGCAGTGACGGAGTGACAGAGGAGAGGCCGTGTAGGGGGCCTGAGCAGGCCCTCGGGGGTCTCCTCTTTAAGCAACACTATGTGAGGAGGGGGGAGAGGGAAGAGTGTTGGCAGCGCCATCACGGTTGGAGTTCCATTCAAGGGTCTTAAGGCTAAACATCTGTAGAGCAAAACACAGTACAGTCTGTTCATCAAACACATGTCAACTCATATGGCCGCTAGGGCTCCAGAAATTTCCCAGAGGGCACCTGTGCCATCTGGTGGTGAATGCAGCAAGGGTTTCTGAGGCTCCTTCCTACACCTGCCTGGGGCTTCTAAGGCATTCGTTTCCTCCCTACCCAGGTTTGGGTGCAAAGTTTAACAGCTAGCTTAACACTTTCACCTTCCACTTACCGATCCAGGAGAGGCAGGTCACTGGATGGAGTGGTGTGATGGAGGGTGTTTTTACTCTGAGCTGGCTGAAAAAGGATTCCAGGAAAGGGCCCTGCTGTTTGGCCACAGGACGCGCTGTGTGTCATAGCACTTAGGATGATCTAGAAGGCTGAAGGTAAAACAAGCCCAGGGATTGGATAACAAGAATTGGAAGCAGCATTGAAACACGTGGGCCCATGTGGCTGGGGCATTTTTGGAAACCACTGGTTTCCGACTACTGGCTACAAACTCTGTGCACACAGGTTTAATCTGAGGTCCGGAATAGAAAGGAAGGTCTCAGAAAGAATCAAGCCCCGGAGGATGTGAAGGTGAGGGAGGGGGATGGGTGACGGTGGAGCTACAATGACTGTGCACCAGACCGGGGCTTCTCAACCAGGTGGCTGTGTCCCGCTGCCTCCTACAGGAATCTGGTCCTACCCGGAGGAGGAGGCTGTGCGGGTATATGGAACAGCAACACTCATTGCTGGAGACGATGCCCTCCGCCAAGAATGCGCATTCCATCTTGCTGACCATCTTAATCACAGACTCAACCCTCACCCCCACCTCCGTCAGCAGGGAGGGAGGGGTACGGGCAGGGCCTCCTCCTTCAAAGCGTGTCAAGGATACTCCCTATGAATGACATCCAAAGTAAGGAACTGATGATGTAAAAGATCAGGTAACCAGCAATTCCTGGGCAGTGGTATAAAGACACCATGTCGCCTTCCCTCAAAAAGGAGAAAAACAGCTCAGGTTAGTCTACATTCCTCAGCATCACTTTTCTATACTCTAAAGGTTGGGTCCAATACCCAGTTTTTGTTTTCCCTAATCTCTCTTTGGCCACCAGATAATGGTTTATAGTGGAAGGTTGAGTTGGTGGTATCTGAAGCTTGTGGTCCTCGCTTGGGAAGCCAGAGCAGCATCTGGGCAAAGGTAGGTAGTAAGCACAAAGCAGCCTGTGGCCAAGTGCATGTCAGAAAAGTACAAGTAAAGGTTTGGCTCATTAAAAAAAATTTTTTTTTTCCAGAGAGAATCATTATAGCAAAAATCCCACAAATCCTTAAATGGAGAAGAGTAAAAGCATACACAGCCCTACCTGTGTTGCTCTGTCACCCCCAGGAGCATGGGTTGTGGGCCCTGTGACCCCCAGACGAGTGGATCCAGGCTTCTCACCATGAGCTCAGTTTGAATCCTAGGAGTTGATCAAGCAATATATTCACGAAGCATTATTTTTCTCTCCAATCAGGTCTGGACTTCAAAGCCTCACACACGAGCATCCTTGCCCCTCAGGCAAAGCTGGAGGGAAGAGCCGACTGGGTCCTGGGCAGGGGCTTCTGAAGCTGGGTGTTGGTGTTGTCAGGGCCCTCATCCTGCCTTCCCTGCTGGCTCAGATGGTAAAAAATCTGCCTGCAATGCAGGAGACCCAGGTTCAATCCCTGGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATGCGGTTGCAAAGAGTCGGGCACGACTGAGTGACGAACACTTTCACTTTTCCCCTGCCTTACAAGTGGTAAGTCCTAACCTTGGGGAGCAGGTTGGGAGGCATGTTTAAGGAATGGCAAACTGGAACATTTCAGGGACAGCTGGCAGATGTGATTCCAGGCTCGGCCCCAAGGACTAGTTGGCAGCTTCTCAAAGAGGCTGAAAGCCCCACGGCTTACCCAGGATCATTAACAGTCATGACTCTCGGCCCTGAGGAATTTAACTCCCCCCATCTGTTTGCTGCCATCTGAGGCCAAATCCAGTAATGTCTCAGAAAGCCTGGGGGCACCCATGTAAACCTCCTGAGAGAAGCTGAACAAGTGTGTATGGCCCCTGAGGAAGGACCCTCACCTGGACCTCAGTCTCTGCTCTCCAGGGCAGTCTGTGCCAAGCCAGAAGCCGGATGCCCCTGAAAGGAGCCCAAGCATAGGAACAAACGTGACCCCAGGTGACTGAGGCAGTGCAGTGTTCTCTAAGCATCATAGTTTAGGGACGTGGATAGCCCATAGCTGGCTCCATGATCATCGTTCAAAGCTTGGACCTTCCTCATAGACCACAGCTCCACAGTCACCTCTCTGTCACTTGACAGCGACAATCTGGAAAC TCONS_00068287 r 3' 246 TCONS_00068289 r 5' 0 EMBV3_30816 AACTTGCCCTTCTGTGGCCCTAATGTCTTGGACAGCTTTTACTGTGACCTTCCTCAGCTC Gene GeneID:510112|LOC510112:XM_002690711:365_cdna Constitutive 0 NULL GeneID:510112 10 GENE LOC510112 NULL similar to olfactory receptor Olr778 EMBV3_39404 GGGAATACCTATCAGAACACTGTAGGTGACCTGCTGAAGTTCATCCGGAATGTGGGAGAG Gene GeneID:100048947|RNASEL:NM_001098165:2_cdna Constitutive 0 NULL GeneID:100048947 16 GENE RNASEL NULL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) EMBV3_07483 GCCACTCAACGATTACAACTGTTTACTGTCATTGTTCCCAGCGAGAGAAGGCTCTCATTG Gene BVV0102_151286 + 0 NULL GK000011.2:93090243-93101474 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028776 TCONS_00028779 TCONS_00028775 TCONS_00028778 TCONS_00028780 TCONS_00028777 1 XLOC_015583 Coding TCONS_00028775 XLOC_015583 Coding Coding RBM18 11:93099277-93121480 j TSS20150 3145 1 TCONS_00028775_3 190 6 0.858616340870192 0.00111676972146867 0.000538111980447983 0.00110634046104269 3.20697179262423e-05 0.0012063801528529 0.000304741181884543 0.000756234101414135 0.000615948423331952 0.000322642285554163 0.000639733778128039 7.77436257722139e-10 0.000305876875565865 0.000130308099762406 6.37453425059e-13 4.15052327631395e-08 0.00276014077356542 0.000264991560134497 0.000978947698976799 0.000694395713797487 0.00113130447449607 0.000245921530044101 0.00089117188578579 3.22717677607125e-07 0.0019781389357327 1.95501575489861e-08 0.000739470770074582 2.16972986486939e-08 0.000125388737277851 0.000178417349176202 0.00106489307970772 XM_005212957.1 RBM18 PREDICTED: Bos taurus RNA binding motif protein 18 (RBM18), 0.0 4457 100.00 0.785373608903021 NM_033117.3 RBM18 Homo sapiens RNA binding motif protein 18 (RBM18), transcript 0.0 2531 79.64 0.914467408585056 TCONS_00028775_3 sp|Q3ZCC5|RBM18_BOVIN RBM18_BOVIN Probable RNA-binding protein 18; 3e-141 396 100.00 0.994736842105263 3 coding 0 0 0 0 -0.380399029833354 0.0959099234860465 -0.00312866345885478 0.956835617358907 GGGGGACGAGGGGAGTATTTCATAGGGATTGATGGAAGCAGAAACCAAAACTCTTCCCCTGGAGAATGCATCCATCCTTTCAGAGGGCTCCCTACAGGAAGGGCACCGGTTATGGATTGGCAACTTGGACCCCAAAATCACAGAATACCATCTCCTCAGGCTGCTGCAGAAGTTTGGCACGGTGAAGCAGTTCGACTTCCTCTTCCACAAGTCAGGTGCTCTGGAGGGACAGCCTCGAGGGTACTGTTTCGTCAACTTTGAAACTAAGCAGGAAGCAGAACAAGCCATCCAGTGTCTGAACGGCAAGCTGGCCCTGTCTAAGAAGCTGGTGGTGCGCTGGGCACACGCTCAAGTGAAGAGATACGATCATAACAAGAATGATAAGATCCTTCCAATTAGTCTTGAGCCGTCCTCAAGCACTGAGCCTGCGCAGTCTAACCTAAGTGTCACTGCAAAGATCAAAGCCATCGAAGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAATATCCAGCAGCGCCTGTTTATTCCTACTTCAAGCCACCAGATAAAAAAAGGACTACTCCTTATTCTCGAACAGCTTGGAAGTCTCGAAGATGATGGTTACGAATGACTGCTCTCCACACCTGAGACCCCCTGCCTTTGTACTTGTAGCTGTGAACAGTACTACCCGACAGAGCAGTCACATGTTAGCGTTTGGTAACATAACATTTTTGGATGTCCTTCTTATGGATGTTTCTTCCCTGAAGTATGTGTGGAATTGAGCATCATCCAGAATAAATAGGATTTTATCCAAAACTGTGACTTGAATGCTGGGATGCTCTAGTTGGCTCATTTGTTTGGATTTGTAACTCCAGAAACATTATATAGTGTGCCAGAAAGAAAGGCAAAGACAAAGAACGTTATCATTCAAATCAGGAAACTTAATTTATTAAGAGCTGTCTTTAAAAAAAAAAAAAAATTTTTCTGTGCTCAGTTGTCTTTACAACATAAAGAAAAAGTAAAAAAACAAGGGAGGGAAGTAAGAAATTTTGAATCATGCTCGAAACTGCTGTTCCAGAATTTTCTATGGAAATCCCTCCAACTGGACTGAAAAGAAAAAGTTCTTGGCAAAAAGAGCTGGTTCTTTGAGCAAATGTTGTGGTAATCTGTTAAAGAATTATGCTTATTGTTTCAAAATCCCAATTAGGAAAACATGGTGTATATCTTTTAAAAGTGTTTGCGTCGACAAAACTGTAGACCGAAATTTAGCATTTTGTACCACAGCAGAAGTCCTGTTTGAAAATCCAACTTGTATTCTATCGTGATCATTTTTTTAAAAAATCTAAATAATCCTGCCTTCTATAATACCAAATGTCATTATTAGTGTGGGACTTTTAAAGTTGCATTTATTGCATGAGATTGTTTTAATAGCATGAGAATGTTCTGTTTGGAATTATATCATGATCAATCTAAATAGAAAAGCAGATATCTTTGAAAACTTAAACATTGCTATATTGATTCTCTATCAAACTTATACCTTACCTTTATTAATAACTGTGTAGGGGTCTGAGTAGAAGAAATTGTCTCGTGTGGGGTGCGATGGGGACACACAGTGGACACGGAAAGTCAGTGGAGCAGACACTGCTCTGGCACCAAGATTGCAATGACCTCATGTTTTATGTGGTTTATAAAGGCTTGAAAGATTGCATGACTTTAAAACAATTCTTCATTTGTAGAACCTGCTTCTCAGATATTTTTTGCCACTTTAAACACTTTGAGTATAACAGCAGAGGAAGAACAACCGCCGATCTGGGAGTCTGTTCCTGTCAGCACTGCTGGTTGGTCATTTTGGTGCCAGGTGGACAGGCTGTTTCACTGGGGAGCACCATTGCTTCTTCAGCATGAAATCATTTTGTTACCCAAGGTGCCACTCAGCGATTACAACTGTTTACTGTCATTGTTCCCAGCGAGAGAAGGCTCTCATTGTAGGAGCTTAAGTCTTCCTATGAGCAGAAATGAATTTAAGACACTTGAACCAAAACTTCAGCATAGTGTAGTGTTGTAATTCACAGAAGGGGTTCAGAGAAATTCCTGTCACCTTTCCCAAGCTAAAACTTTTCAGATATCGTTTAGTGTTATTCTGCCTGCAAAACTCAAGAGCTCAGTGTAAGATGCAAGTAACTCTCTTTCTGTTTGGGGGATAGTTCAGGGAAGTGGGAGCATTATCTCCCATTTTTCTGGTGACTTCTCTAAGAATGTAGAATTCACCATTTTACCCTTGAGGTCCTCTAAGAGCTATGGTGGAATAGGACTTAATGCAAAATAAATAGTCTTCTATTTTTAATAGGAACTTAGAAAATACTTAACTTTGGATTATCTAGAGTTGTTTCCTTTAGAAACCAGAGCTATTTATTTGTATTTAAAGCAATGTTTATTATTTGTACTGATTCGTACTCCTTTGTGTGAATAAACGCGAGACAGTGTCTGTGGTTGTGTCTTCTCTCGTCCATCTCCTGCACTGAAGACTGCAGCTCTCCGGGAGGCTTGTTCCTCCTGTGGCCATGGAGGTGTCCAGGCAAGGTGCTGCTTCTAAGTGCCTTCTCTGATCCCAGAGGCAGGTCTCTGCACCCTTTGTGCCTGCCTCCTTCTGTTAGAGATGAGCAAAGAGACTAGCTGTTCTCACTGTACATCTAACTGTTCCCAAAAAAGTTGTTAATGGAGGCCCCTGAAGTAGGAAAATGTGTTTGGTCCGTCTTTCAAAGTAGGGTTTCAGAAGAATAAAAGTACATGTTATAAATATGCTGAAAGTAGTGTGGTTAAAGGTTTGTTAAATATGAGTGTTAACTTGGTAAACTCCTTGTTATGAGGTTATCTGTACTTTAAAATTATTTGTTGGCTTACTGTTTTGCTAAAATTATGTCACAGTTTTGATTTTTACAAGAGTGAAGAATTGAGGGGCATATCTCCTTAATCTCAGCTCTTCTTTATCCTTTGCAAAATGTAACCCTAACCAGTAGACTTTATGTAACTGGAATCTCAATGTTAGGAGAAAAAAAATCACACGAAAGATTTTTCAAAGCATATCAAAAATCAGCAGCAGCAGTTTTGTAAAACCAGATATTCTAGAGCTGTTCCCTTGTCTATTAAGGCATGTACAGA EMBV3_14662 GATGATCACTCGTATCGGTACCTAAGGCTGTCCCTCACTCTCTGCCCCATAGTTATCTGA Gene BVV0102_381850 + 0 NULL GK000016.2:935132-1049457 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15694 CACTGTTGGTGGGAATGCAAACTAGTACAGACACTATGGAGAACAGTGTGGAGATTCCTA Gene BVV0102_298933 - 1 EMBV3_01677 GK000002.2:46412627-46648516 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00254150 TCONS_00165968 TCONS_00001581 TCONS_00123391 TCONS_00206719 TCONS_00175573 TCONS_00056148 TCONS_00254633 TCONS_00232319 TCONS_00047541 TCONS_00135550 TCONS_00057034 TCONS_00233166 TCONS_00185779 TCONS_00125552 TCONS_00153182 TCONS_00098380 TCONS_00062995 TCONS_00202657 TCONS_00071486 TCONS_00205487 TCONS_00116823 TCONS_00149577 TCONS_00166732 TCONS_00071497 TCONS_00208544 TCONS_00071481 TCONS_00063105 TCONS_00091358 TCONS_00200342 TCONS_00102423 TCONS_00091607 TCONS_00252947 TCONS_00149427 TCONS_00199614 TCONS_00020070 TCONS_00209024 TCONS_00072392 TCONS_00232225 TCONS_00201763 TCONS_00055783 TCONS_00222117 TCONS_00220566 TCONS_00199552 TCONS_00179469 TCONS_00187370 TCONS_00055785 TCONS_00249330 TCONS_00055781 TCONS_00204640 TCONS_00253253 TCONS_00240217 TCONS_00202656 TCONS_00032802 TCONS_00200691 TCONS_00238992 TCONS_00157489 TCONS_00147917 TCONS_00108242 TCONS_00251001 TCONS_00252524 TCONS_00117402 TCONS_00039851 TCONS_00125240 TCONS_00130090 TCONS_00001575 TCONS_00156830 TCONS_00205486 TCONS_00152671 TCONS_00180508 TCONS_00230487 TCONS_00206300 TCONS_00158500 TCONS_00091328 TCONS_00141846 TCONS_00002942 TCONS_00177964 TCONS_00249775 TCONS_00177242 76 XLOC_157088 XLOC_100808 XLOC_000393 XLOC_074945 XLOC_125240 XLOC_105354 XLOC_033951 XLOC_157565 XLOC_141804 XLOC_027674 XLOC_081773 XLOC_034835 XLOC_142648 XLOC_111832 XLOC_077094 XLOC_092947 XLOC_058626 XLOC_037722 XLOC_124016 XLOC_043257 XLOC_124664 XLOC_070989 XLOC_091451 XLOC_101568 XLOC_043268 XLOC_127057 XLOC_043252 XLOC_037832 XLOC_056133 XLOC_121994 XLOC_061863 XLOC_056381 XLOC_155888 XLOC_091303 XLOC_121267 XLOC_010748 XLOC_127535 XLOC_044161 XLOC_141711 XLOC_123408 XLOC_033591 XLOC_135426 XLOC_133883 XLOC_121205 XLOC_109242 XLOC_113417 XLOC_033593 XLOC_152273 XLOC_033589 XLOC_124496 XLOC_156194 XLOC_146881 XLOC_019039 XLOC_122343 XLOC_145658 XLOC_095944 XLOC_089803 XLOC_064150 XLOC_153944 XLOC_155465 XLOC_071568 XLOC_023668 XLOC_076782 XLOC_078801 XLOC_095290 XLOC_092436 XLOC_110275 XLOC_139977 XLOC_124877 XLOC_096954 XLOC_056103 XLOC_086273 XLOC_000741 XLOC_107737 XLOC_152718 XLOC_107016 Coding TCONS_00204640 XLOC_124496 Coding Coding - 6:20413972-20418826 - TSS153051 3148 2 TCONS_00204640_9 130 0.306543837357052 2 0.351741191015866 0.148505195416181 0.126002462205398 0.136800279474487 0.0993590771190472 0.130133882119036 0.0480536066423031 0.0760458575472801 0.114515044727616 0.17750770940019 0.0218214825413354 0.00281132127368957 0.00379017950592231 0.0240202229194392 0.0529367491886849 0.0398083188833594 0.0009935021033482 0.00224579179507347 0.0010368162934631 0.0998810081179903 0.0877740241495524 0.0433217597661745 0.000903736109012594 0.000777381793498529 0.00127469500945967 0.123708491525303 0.0914770614046789 0.0894469428108921 0.00130516825875574 0.00102207187226357 0.00196589778498949 XM_005203639.1 TPM3 PREDICTED: Bos taurus tropomyosin 3 (TPM3), transcript variant X14, 0.0 2928 90.58 0.64707750952986 NM_153649.3 TPM3 Homo sapiens tropomyosin 3 (TPM3), transcript variant 2, mRNA. 0.0 2233 83.14 0.64707750952986 TCONS_00204640_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-35 131 59.81 0.971698113207547 0 noncoding 1 1 1 1 -0.859087928639218 0.00683989089552069 -1.06405010848439 3.52673399974048e-05 ACTCAAAAAATGGGCCAAAGAACTAAATAGACATTTCTCCAAAGAAGACATACAGATGGCTAACAAACACATGAAAAGATGCTCAACATCACTCATTATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATTTCACGCCAGTCAGAATGGCTGTGATCCAAAAGTCTACAAGCAATAAATGCTAGAGAGGATGTGGAGAAAAGGGAACTCTCTTACACTGTTGGTGGGAATGCAAACTAGTACAGCCACTATGGAGAACAGTGTGGAGATTCCTTAAAAACCTGGAAATAGAAATGCCATACAACCCAGCAATCCCACTGCTGGGCATACACACTGAGGAAACCAGAACTGAAACAGACACGTGTACCCCAGTGTTCATCACAGCACTGTTTATAATAGCCAGGACATGGAAACAACCTAGATGTCCATCAGCAGATGAATGGATAAGAAAGCTGTGGTACATATATACAATGCAATATTACTCAGCCATTAAAAAGAATACATTTGAATCAGTTCTAATGAGGTGGATGAAACTGGAGCCTATTATACAGAGTGAAGTAAGCCAGAAAGAAAAACACCAATACAGTATACTAATGCATAGATATGGAATTTAGAAAGATGGTAATGATAACCCTGTATGGGAGACAGCAAAAGACACACAGATGTATAGAACAGTCTTTTGGACTCTGTGGTGGAGGTGGGGGATGTTTTGGGAGAATGGCATTGAAACATGTATAATATAAGAAACGAATTGCCAGTCCAGGTTCGATTCAGGATACAGGAAGCTTGAGGCTGGTGCACTGGGATGACCCAGAGGGATGGTACCGGGACGGAGGTGGGAGGGGGGTTTCAGGATTGGGAACATGTGCACACCGTGGCGGATTCATGTTGATGTATGGCAAAACCAATACAATATTGTAATTAGCCTCTAATTAAGATAAATAAATTAAAAAAAAATAAAGAGATTGTCATATTGGATTTATTTATTTTGGAGGGACTGGTTATTTCAAAAAGACATTTATCAATTTTCAGTATCAAAACAGTTACACTATTGGTTTTTTTTCTCCCAATTGGTCCCCAAAGAGACCACACCAAAGGAGAGGACATTTTAAGCCAATTAAGCTGCAGGATGCACCCCTAACAGACCTCACTGAAACCTCATCAAAAAAGGGGGATTGGGTAGGGAAAGAAACTTTAAAAGATCAGCACACTGCTAGCCCACAGACTGTAGAGAGCTCTCACAGGCAGAGGGGTGACCAGTTTGCCTCAACCCCAAAGAAGCAAAGTTCCAAAATATAAAAATTTACAAGTTTTGTACATACGCTTTTCAAGATTTCTCCAGCACTAACCAATACAAAGCACAGTGAGATGGCACTTTTAGAGACAGCAGCTTCAGACCCAGAAAAGGGTGATGAGATGAGTTTCATATGGCTAAATCAGTGGCAAAACATAATTTTCTTTCCTTTCTTTCAAGGAGGCAGGAGAGCAAATAAGTGGTCACTTCAATATAAGGGGCACATGATCCATTAGTAGTTGGGAACAGGGTAGAGCTGGGACAAGGATTTGGTCTCAGAGGTTTTACCATCTTAATTGTTTGGTCACTTCTGATGAAAAAAGAAAAAAAAAAAGTTGTCCAAAGATACCGTAAAGCTGAAAACCTGAACAGCACTTTTTTTTGGCTAACTCCTTCTGGAATCATCTTTCTGCTTTGGCAGGTACTTTTTACAGGGCAATGAGGTTTCCCCAAATGGAGCCTTTCTCTGGGCTGCTAGGCTCTCAGTAAGGCAGGCCCAAACCTTTTCCCTTTCTCTCTGGAGAAGGCAATTAAGCTGAAATGTTACCTTCCAAAAGTGAGAAAGGGATTAGACTGCTGCTTCAGTTCTACGGAATTATCTGGAATGTTTTTTTACAAATGGTTGTAACATCAAGAACAAAAAAGGTAATTACAAAATGTGTACATCACAACATGCTTTTAAAGACACTTTGCATTGTGCTCACATTCCCTTAAACGTTGTTCCCAAAGGTGCTCAGCCTCTAGCCCACCTGGAATCTCTGGGGAGAAGCAGAGACTGGCGAAAAGGACACAGGAGTAGGGGGGTGGTCAGCTTCGGGCAGGCTGGCCCCAGTGGAGTCGGAGTCGGGGTGAGAGGGAGGAGCAGCGGCAGGGCGGGGCTGGGGTGCTCTACATTTTATTCAGGTCAAGCAGAGTCTGGTTCAGCATCCTTTGTGTACAGAGGTCCTCCTCTTTGGTGCATTTCAGTTTATCTTCCAAATCATCAATTGTCTTTTCCAGCTTGGCTACTGATCTCTCAGCAAACTCAGCACGAGTCTCTGCCTCCTTGAGTTTTTCGGTAAGAATCTTTATCTCTTCCTCATATTTGTCTTCCTTTTGAGAGTACTTTTCTTCAGCAGCACTCAGACACTTCAGGTGCTGGTCCATCAGTCTGATTTGCTCACCCATCTTTCGGCAACGGGACTGTGCCAGCTCCGCTCGCTCCTCTGTGCGCTCCAAGTCTCCCTCAATAATCACCAACTTGCGAGCCACCTCTTCATACTTCCTGTGTGCCTCTTCTGCAATGTGCTTAGCTTCTTTGAGTTGGATTTCCTGGAGTTCCATTTTTTCTTCATCTTTTAAGGCTTGGTTTTCAATAACCTTCATAACTCTCTCGCTCTCATCAGCAGCTTTCTCAGCTTCCTCCAGCTTTTGCAGCGCAGTGGCCAGGCGCTCTTGAGCTCGGTTCAGCTCCTCTTCAACCAGCTGGATCCTACGGTTTAAGGAGACCACTTCAGCCTCAGCCTGTTCTCGGGCCCATCTTTCTCCATCCACTTTCTGCTGGAGGCGCTTGGCCCTCTCCTCTGCATCATCGGCCTGCTGCTGCAGAACCTGGATCTTGCACTTCATTGCCTCGGTGACAGCGATCGCGGCCATGACAGTGGTCCCGGCCATGGTCCCCACCCAGCTCCTGCTTGCCTTCGGGTTCCTGCCTCCTCCGCTCGGCGCTCGGCGTTGCAGCCGCTTCTCACCCAGCTTGGTTCCTGCAGGGTTGAACTTGTGGCCCACACTAGGCGAAGAGCATGCACAGTCAAAGCTGACAGTAGGAAGCTTGGGATACTTAGGAATGGTGGGTTGCAGTTTATGGGGT TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 35715 TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 30976 EMBV3_23924 GCATCCTGTGGCCGACTCTTCCCCCGCGGGGGCTCAGATAAAGGCCACCGTGAAACGAAA Variant GeneID:512885|C19H17orf49:NM_001038092:90_cdna 180^281 1 EMBV3_34482 GeneID:512885 19 GENE C19H17orf49 C17orf49 MGC134279 chromosome 17 open reading frame 49 ortholog EMBV3_00972 TGGTCCACGGCTGGCAGAGTGGCTACCAGCACAAGCGGATGCCCTTGTTGGATGTCAAGA Gene GeneID:100126544|LOC100126544:NM_001110447:33_cdna Constitutive 1 NULL GeneID:100126544 23 GENE LOC100126544 MGC140329 hypothetical LOC100126544 EMBV3_00302 GAATGGTTTATTATTGCCAGTTTTGGCCTCCTCAGTGCCCTCACACTCTGCTACATGATC Gene GeneID:525735|RNF130:NM_001099708:25_cdna Constitutive 1 NULL GeneID:525735 7 GENE RNF130 NULL ring finger protein 130 EMBV3_16693 AGAGCGCTGAGGAGCGTTCCCTGCAGCTTCTGATTAGTTATCAATTTTATGTGAAAGTGC Gene BVV0102_211702 + 1 EMBV3_03184 GK000017.2:7728306-8880538 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43116 TTGTGGCAGAAGCTGGAGGATCGAAACAGATAGTGAACTCATTGTCGGGTGGGGGGATAC Gene GeneID:281214|CXCL2:NM_174299:20_cdna Constitutive 0 NULL GeneID:281214 6 GENE CXCL2 GRO3 chemokine (C-X-C motif) ligand 2 EMBV3_43174 GAATGGTCCTAGCCAGTGAATTATTACCTCCGTGGTTGGTTCCCTTTCTAGTAACTCTGG Gene GeneID:532556|MGA:XM_002690801:12_cdna Constitutive 2 NULL GeneID:532556 10 GENE MGA NULL MAX gene associated EMBV3_07823 GGAGAGGCGAGAGCACGGTCTAGAGCTGGAACGCCGACCTCTCGGGAGCCTCGCTGCAGT Variant GeneID:507073|CCDC64B:XM_002697938:613_cdna 835^926 1 EMBV3_19126 GeneID:507073 25 GENE CCDC64B NULL coiled-coil domain containing 64B EMBV3_28816 TGGCCCTCGATGTGCTCTGCGTGTTGCTGGATGATTGTTGGAGAAACCCTGTCTGTTTAT Variant GeneID:617172|PPAP2A:NM_001080329:7_cdna 444^595 3 EMBV3_15645 GeneID:617172 20 GENE PPAP2A MGC133873 phosphatidic acid phosphatase type 2A EMBV3_34479 TTCTCGGGCCTCACTGCCTTGGGCTGACTTGTCCAGTTCATTCTTCCTTCGTCATCCTCT Gene BVT0102_357589 + 0 NULL GK000005.2:106276820-106604204 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12843 CCTATAATGAAGAAAAGGATCCATGACCAATATTACCTGGGACGACAGGAGGACCTATCC Gene GeneID:100124506|LOC100124506:NM_001102547:15_cdna UTR3_Alt 1 NULL GeneID:100124506 X GENE LOC100124506 MGC165729 hypothetical protein LOC100124506 EMBV3_06811 CACCTCCTGGAACCTGAAGTACCCGTTTATCCCTTTGTTACTGACCTCAGTGTATTGTGC Gene GeneID:538731|ALG8:NM_001076125:34_cdna Constitutive 0 NULL GeneID:538731 29 GENE ALG8 MGC142391 asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) EMBV3_03945 CCTATGACCTTTGAGGACATGGCTGTGTACTTTTCCCAGGAGGAATGGAGGCTCCTTGAT Gene BVV0102_294269 + 0 NULL GK000018.2:64766512-64782839 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087709 TCONS_00084974 TCONS_00084972 TCONS_00087708 TCONS_00064756 TCONS_00084973 TCONS_00087707 TCONS_00087700 TCONS_00087706 TCONS_00087697 4 XLOC_052575 XLOC_051765 XLOC_039480 XLOC_052573 Coding TCONS_00087700 XLOC_052573 Coding Coding LOC100296121 18:64742070-64749641 j TSS65089 2550 1 TCONS_00087700_2 437 4 0.663672391017173 0.00291206694963474 0.00251832243132861 0.00203105000928238 0.00179237376634876 0.00149404622546278 0.00115511511306901 0.00177000818289065 0.00180633537602887 0.00240322131536705 1.21281847501325e-08 1.42332634608394e-14 2.64463453083642e-17 0.000203358537938408 0.000605399362746543 0.000246447961487233 0.000288098355679499 1.00874158700511e-19 2.70528761708032e-28 0.00341818944588173 0.00218679269077074 0.000776313430738668 3.46269076704622e-164 0.000222856705774368 0.000559972671849951 0.00104130055842484 0.000281325444133278 0.000556423793482089 3.04176910304085e-179 7.25301462693556e-12 3.27915209710929e-25 XR_228574.1 LOC101909336 PREDICTED: Bos taurus zinc finger protein 416-like (LOC101909336), 0.0 4120 100.00 0.895294117647059 NM_001010879.2 ZIK1 Homo sapiens zinc finger protein interacting with K protein 1 (ZIK1), mRNA. 3e-113 414 72.79 0.285490196078431 TCONS_00087700_2 sp|Q3SY52|ZIK1_HUMAN ZIK1_HUMAN Zinc finger protein interacting with ribonucleoprotein K; 4e-141 417 48.63 0.986270022883295 6 coding 0 0 0 0 0.025729258323333 0.815767220722097 -0.0350782640274577 0.495388494297714 GGGAGTCGCTGGGCAAGTTTGGGTCTTAAAGGTCCCCAGATAAAGATGCTGTGCCCGCTGCTCTGAGGAGGGTCTGAGGCTCTGCGTGGCGCCATCTGGCCTGACTCTGACTTGGGTCGGGGACAGCGCCGCCGTGCCCGGGCCCCGCCGCCCTCAGACTCTGCCGGGACGGCCGTGCTGACAGATCTGCTTCGGCTGGTGGGGACTAAAGTTACACTGCCCTGCTTTTTCCACATTCAGCAGAGCCGCTGATGGACTGTTCACTGGGTCCTGTGACCTTTGAGGACGTGGCTGTGTACTTTTCACAAGAGGAATGGAGGCTCATTGATGAGGTCCAGAGACTCCTGTACCACGATGTTATGCTAGAGAACTTGGCACTGGTTGCATCCTTGGGGTGTTGGCATACAGCAGAGGATGAACAGACACCTTCTGAGCAGAATGTTTCTGTAGAAGTGCCACAGAGAAATACCAAAAAGACAGACCTGTCCAGCCAGAAGGTCTGTCCCTGGGACATGGGTAACCTGGCCTTAGAAGGTGGTTTGTGTGGACCCGAGGTCCTGCGAACAAACCCTGGCCAGACACTGTGTGGGACAGATGTGAAATCCCACCAGCACGGTGGAGAGAAGCTCATGAGAAGAGATTGGGGTAAGGCCTTAATGAAGAACTGCACAGTCCATGCATTGGAGAAGGCTTTTATGTGCCAGGAGGCGAGGAAGGATTTCCCTGGTACCTCTGACCATGTCCAGCACCAGGTTAAACCACAAATGATGGAGTTTGTAGCAGAGTTTCACAATGGAGAAAAGCGTTTCAAGTGCAGTGAATGTGGGAAACTCTTCTACCGGAAGTCCAGGCTTGCTCAGCACCATCGAGTCCACACCGGAGAGAAGCCTTATGAATGCAGCGAATGTGGGAAAGTCTTTCGATGCAGCTCCAGCCTTGCTATACATAGAAGGATTCACACAGGGGAAAGGCCTTATGAGTGTAGAGAATGTGGGAAATTCTTTAGACAACACTCCCAGCTTGTTGTGCACCAGAGAATTCACACTGGAGCCAGACCATATGAGTGCAGTGAATGTGGGAAAACATTTAGTACTAAAACCAAACTTGATCAGCACTGGAGAGTGCACACCAGAGAGAGGCCTTATGAATGTGAAGAATGTGGGAGAACTTATAACTGTAAACGCATGCTTGATCAACACCAGAGAGTCCACACGGGAGAGTGGCCTTATGAGTGCAGTGAGTGTGGGAAAGCCTTTAGGTACTTCTCCAGCCTTTTTATGCATAGAAGAATTCACAGTGGGGAAAGGCCTTATGAGTGTAGTGAATGTGGGAAGTCATTTAGGCAAAAGGCCCACCTTCAAGGCCACCAGAGAATTCACAGTGGAGCAAAGACGTTTGAGTGCAGTGAGTGCGGGAGATGTTTTAGCCAAAAGTCTGTTCTTACTAAACACCAGAGAGTCCACACTGAAGAAAGACCTTATATGTGTAGTGAATGTGGGAAATGCTTTAGGGATAGAACTAGTCTCATTAAGCACCTGAATTTACACTGGAGAAAAGCTACCTAAATATACTGAATGTGGAGAAGTCTTAAGCACCTGAAAAGAAAATTTCACACCACAGAAAGGCTCACAACTACAGTAGTGTGGAAACTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGAGTGTGTGTGTATATGTGTGTGTGTGTATGTGTGTGTGTGTGTCTGTGTGTGAGTGTGTGTGTGTGAGTGTGTGTGAGTGTGTGTGTGTGAGTGTGAGTGTGTGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGGTCAAAAGTCTACTCCGAGCACCAGAACCATCATAGCCCAGGTAGAGCCAAGAATACAGAGCGTGTAGGAAAGTTTCCACTGAAGATCTAACCTCTTCTGTCACCACAAAGTTCATAGTTGAGAAAGGCCTTCAAACTAGGGGAAGAGACAGCAAATGAGCTGTGTTCTTAGTGAATACATCTTACTGAACAGGCTCCGTAAGGGAATCATCACCTGGAAGTTGAATGCCATCCATCTGCACAGCCCTAGTATGGAGATGGCCTGTGGGCACCTGGTTCATTGGAAGCTTCTAAAAAGCTCAGGTCTACTTCCTAACCTGTGCAGCAGCCTTGCCAGACTTCTGGTCATTGTGAGTTTCTTCTACCAGGTGACAGATCCTCTTTTGGGCGTCAGTCCCCTCAGTGTCATCAGGGTAGGTAGACCTTTGTGCTCTCCTGTCCCCTGAAGGAAAGCACGTGTAACCTGAGCACTTGGGTGGTGTCATGCTCTTAGATCCTATCAACTGCCTAGGAAAGGAACTAAGCAGCTTTGACCTTGCACATGCACTCTGGGTTCTGATGGCTGCTGACAGAGGTTTACTTTCTTTGGCATTGAGTCATGTCATACTTATGACATGTTTCTATCTTCAAGTCACCCTGCTTGACAACTGCTTTCTTCTAAGCAATTCTCTTTTCTTTTAATGAATAAAAACTTTTTTAAGCCACTGCAT EMBV3_30981 GGCATCTACGCCAAAGTGGACCAGCTGGAGAAGCGATGGGCACCGGTGGCCCCGACGTTC Variant GeneID:617710|BCAS4:NM_001076474:1324_cdna 318^452 2 EMBV3_32809 GeneID:617710 13 GENE BCAS4 MGC152217 breast carcinoma amplified sequence 4 EMBV3_13990 CTGTAAACACGATTGCCTTGTTCAGTTTTGTTGTAAACTGACTTACCATAAGATGCACTG Gene BVV0102_091012 + 0 NULL GK000003.2:6939733-6975846 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171820 1 XLOC_103922 Coding TCONS_00171820 XLOC_103922 Coding Coding UHMK1 3:6968242-6995873 = TSS128087 9074 1 TCONS_00171820_4 419 8 0.671878393051031 0.000607920655923697 0.00117545315926392 0.000655068667967088 0.000541805453134768 0.000502911627391265 0.000287770395296684 0.000477673709402564 0.000498732779289739 0.00138601508611737 0.00186078555166401 0.000423488428225684 0.000626553950522204 0.000226563586872556 0.000527792959174297 0.00037918122403952 0.00184171052386944 0.000672357321829734 0.00117656918768253 0.000768553762292457 0.000915479472447549 9.16452280037085e-05 0.000598780212215125 0.000527312951211573 0.00102447123141689 0.000759095298491558 0.000736742598270553 0.000423352899886053 0.000222293055498976 0.000244604743679494 0.000483405581016901 NM_001205585.1 UHMK1 Bos taurus U2AF homology motif (UHM) kinase 1 (UHMK1), mRNA. 0.0 2309 100.00 0.140952171038131 NM_175866.4 UHMK1 Homo sapiens U2AF homology motif (UHM) kinase 1 (UHMK1), transcript 0.0 4168 84.17 0.422085078245537 TCONS_00171820_4 sp|Q8TAS1|UHMK1_HUMAN UHMK1_HUMAN Serine/threonine-protein kinase Kist; 0.0 868 99.76 0.997613365155131 5 coding 0 0 0 0 0.0441571091595179 0.753506840602401 0.0217934152506293 0.712532216724252 TCCCTCCCCACCCCGCCCCAGGAGACGGTTTCCGGTGTCATGGCGGCGTGAGGTCCCGGCAGTCAGTGAGGCGGCTGCAGGCCCGTCCCTGCGGAGCCGCTGGTCCGGCAGGCGGGGATGTGACCGCAGGCCCTGCCGGCCTGCCCCGGGCGTCGAGTCAGCTCCGTGTCAGCCCCCTCAGTCCGCACCGATGGCGGGATCCGGCTGCGCGTGGGGCGCGGAGCCGCCGCGGTTTCTGGAAGCCTTCGGGCGGCTGTGGCAGGTACAGAGCCGCCTGGGTAGCGGCTCCTCGGCCTCGGTGTATCGGGTGCGCTGCTGCGGCACACCCGGCTCGCCCCCAGGAGCGCTGAAGCAGTTCCTACCGCCAGGAACCACCGGGGCTGCGGCCTCGGCCGCCGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCTGGAGCAGTTGCAGGGTCACAGGAACATCGTGACTTTGTATGGAGTCTTCACAATCCACTTCTCTCCAAATGTGCCATCACGCTGTCTGTTGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGCTTTTATATTCCAGTCACCAGGGTTGTTCCATGTGGATGATACAGCACTGTGCCAGAGATGTTCTAGAGGCCCTTGCTTTTCTTCATCATGAGGGTTATGTCCATGCAGACCTCAAGCCACGTAACATATTGTGGAGTGCCGAGAATGAATGTTTTAAACTCATTGACTTTGGACTTAGCTTCAAAGAAGGCAATCAGGATGTAAAGTATATTCAGACAGACGGGTATCGGGCTCCGGAAGCAGAACTGCAGAATTGCTTGGCCCAGGCTGGCCTGCAGAGTGATACAGAATGTACCTCAGCTGTTGATCTGTGGAGCCTAGGAATCATTTTACTGGAAATGTTCTCAGGAATGAAATTGAAACATACAGTCAGATCTCAGGAATGGAAGGCAAATAGTTCTGCTATTATTGATCACATATTTGCCAGTAAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACCTAAGAGACCTTATCAAAAGCATGCTTCATGATGATCCAAGCAGAAGAATTCCTGCTGAAATGGCATTGTGCAGCCCATTCTTTAGCATTCCTTTTGCCCCTCATATTGAAGATTTGGTGATGCTTCCTACGCCAGTGCTAAGACTGCTGAATGTGCTGGACGATGATTATCTTGAGAATGAAGAAGAATATGAAGATGTTGTAGAAGATGTAAAAGAAGAATGTCAAAAATATGGACCAGTGGTATCTCTGCTTGTTCCAAAAGAAAATCCTGGCAGAGGACAAGTCTTTGTTGAGTATGCCAATGCTGGTGATTCCAAAGCTGCTCAGAAATTACTGACTGGAAGGATGTTTGATGGAAAGTTTGTTGTGGCTACATTTTACCCACTGAGTGCCTACAAGAGGGGATATCTGTATCAAACTTTGCTTTAATCAGTAACCTGAGGACTGTTTCCTGTTTCTCCTCTTCCATCTCCTGGGTTATTCTACATCTGAATGCAGGAGTACCCCCCCCTTACCATTTTAAGGGAATACTTTGTATCTTTATTCAATCCTGCTAATGTGCAGCCATTGCTCAAGCAGTGACTGGGTTGCAGACATTAGGCACTGCTTAGGACAAGCCCTTTTAGCTATTCATTGAGGGGTTTTAGAGCATCCATGTGGGCATCTTTTATTTGTGCAGTAGGGCAAGTGCTGCTCTTCAGTATGTAACTTAAAAAGATACTTTTTCATGTGATCATGAAGCAGGGATGAATACTATCCTGTCATAGGAATATTAACAAATTTGTTAGCGTTGGTGACATCACCTACAGATTATTCCTTTATGTTGTTAGGTGGTTCTTCCTTATTGATATCCGTAGTTGGCACTGGATGCTCTCGGTAATTCTGAGTAATTGTCAAGCAGCAGTTCCCTACTGTGTTCTTAACACTGAGTTATGATTTTTTTTAAAGGAGTACTGTAGTACTGAATATTCCTTTAAAGAAACTGCGGTGAGCCTATCTATATATTTTTTTTTAATTAAGGCTTTTAAAATAGAAAGCTGATGCTTGATCTTGCACAATTTTTATGTCTAGTATGTATGCTCGAGTGAGTGTGCAGGTATGAAAGGTTAGAGAATATTTGAGTAGCATTCTTTATAGTGTGAATCTTGTGGGTTAATACAGTCTATGCCCATTTCTTCCCTACCTGTTTAATGTCTATAAGATTTAGGATACAGGTTTTTTGGGAGTTGGTGTGTCTGAAACAATGAAATGAGAAAATAGTCCATTCCTGAGAGGCCCAGAACACACAAGTCTAGACTGGATTACATTGAAACTCTCTTAAAGTGAGAAAACTCTTGTAAGAGTTTTGGTATACATAGATTGCCCCATCTTTCAGGGTCTGATTTCGACCCTGTATTAGCTCATCTGTTTTGTACTGACTCTTCTAGGATCATTGTAAGATTTCTCAAGATAGAGTTCTGCCTACTATGATGGAAAATTTATATTGATTAAAAAGAAAGAATTAGTTGTTCAGTGAAGGGAAAAGAAAAAACAATAGGTGAAGGGTGCATAATCAAGGATTCTTTATTCTTCCTTTTTCTCTCATCTCTGTCCCACACCTTCTTTTCCTCTTCCTCCATTCTTTGTCTATCCTTAGCTGAAGAGAAGTTAGAGGAAAGCATCCTAGCTCGTCAGGTGGTCTGACTTTTGACTGCAAGGAAGTTAAGAAAGGTGTAGCTATAATAAGGTGGAAGTAGAAAGAAAGAAAAACTCATGAAGAATTCTTAAAAAGATTTATAGCAATCTAACGTGACCCCAGGTAGAGGCTACTAGTATTCATGAGTTCATGGGTACAGGTTGATTACATGCTCTTAGGAATTATAATTATGGATTCCTCTCACTTTACAGTAGATTGTCTTCAGAGATTTAAATCTTAGGAAATCTTTATAAAGCACTGATTATACAAAAAAAGTTATATACAGGTTATGAATTTTTTGTTTTCGTAACTAAATGAAAATTTTATTTATTTATTTATTTTCCTAAGGAAAACACTTTTCTATCTTGCCCTGCTGGAAGGCTCCTCATATGGTTTTCCCTGTGGGTGCCATGCAGGTTATTGAGAGCCCAGTTAAGAATTGACGTCTTAGAGGATGAATTATTTTACCCTGTTCACACAGTTACTATTTGATATTTTAGTTAATCATAGTTACCTAATTCTTCAGAACTCTCTTTAATATTTATTATGAAGCCAAATTTGGTATAAGGAGGATAAATAATGACTTGCCAAAAGACCTTGTGGCCTGGTGCCCGAGGGAAAATTGTATAAGTAGCTTCTAATATGTGCCCTGAGCAGGAAGAGCTATTGTTTTTCATTTTGGCCCTTTCAGAGGTTTATTAGCTGGTTTGGTTTCAGGTGAAAATTGGAGAGAGTATTATGGAGACCTGAGCTTTCCTAAAACATAAATGTTTGTGTGGGTGCAGCTTCTGTGGTGATGAAAAGCACCAGGTCCTTCCGTACAGACTGATGAGCACAGTGCAAATGAGCTCTTTTCAGGGCAAGTATTCTGGTTAGCACGTACACCTTTCTCATTTCCCTTCCCCACCGCACCAAAAAGAAAAGTCCTTACAAATAAACTGCAGGTAGGCTTCTAAGCTTAATGATGCAGTGTGCTGCTAACATCTTGATGCTGAATTTCACAGCATTCTTTGATCGTCTTATTGTTGATGTATTCATCATGAGTATATGTAGTGTTTAACACTGTAGAATTCTATTACAGAAGATGCTAACTAGATTTTAAGTGTGCTGAGGAAATAACTGATGAGCCTAAGTAATCATGCATTGAATTAAATGTTTTATATTTGAGCCACAAAATTGAAAAAAGATGCCTCCTTTGATTTAAATTGTTATTTTATAGCTCTTAGCCCATTACTACCAAAGATGACATTTGCAGATTTTTCCTCCCTCTTCTAATATTATAAGAAGTTTAATCTTGCTAACTTTTTAAAACCTGAACCAAATATTAAAAGATGCAGTTTTCATCATCCTTTAGGATGAAATATGTACACAGAGATTTTGATTTCTTGAAGTTTTAAAAAAATTTCTTTTGGAGAGGTAGGGTAAACATAACAAAGGTTCGTGTTCACTTAACCCCTACCAGTTTGGGAAAATTTTATCTCAGGTAATTTTTCTTTGCCTAAATTAATATCTGTACTTCCTTCCTTCCCTCTTGCCTTCAAGTTTCTTCTTTATTGTCCCATGATGTTGTCCTGGTACATTTTTGTCCCAGAAAAGGCATGTAAATTGATTATTCTGTAGGAAATCTTTGGTTCTTTGGAAACATATTTGGAGGAGGTGGCTAGTTGGCCACTTTCGAAACTTTAATGCTGTATTTAGAGAAGAATAAATGGGGTTGGATGCCTCAGTAAAAGATAGCACTAGCCAAAAGAAACTATTTGCTGCATTTTAAAGGCATAATAACAAAATGAGCCTCTTGCAATAAGAGATTGATTGCATTTATTATTACTGGATGTCTTCCTTGTTTTGTGGCCATCAGTATAGCACATCTTTAGGAAAAAAATGTCTCTGCTATGCCTCGAGCCACTGCTATGGCTGCTTTTAGAACAAAACCAGAAATACAGTTTTTCTCATCCTTCTCCCTGTTTTCATTGAAACAGGTATTGCCTTCTTTTTAAAGGTACTCTGGCTGCTAAATAAAAGAGTGCTGAGCTATGTTAAATTAGCCTTTAAAAAAAATCTGAATTATTATTTAACTTCTCTTCTAGAATCATGTTACTTGTACCTGCAAATTTATTATAAGGAATGTTGCCAGAAAGAGTGCTGCCGTGTAAAGGAAGTAGAAGAGAAACTATGGGCTAAAGTTTGTTTCTGTCTTAGTTCACTGGGCTTCATGCTGGTAAGGGAGTCAGTTACCTTTCTGGAATAAATTATAGCCAGAGTTACAATACTCAGATGCTGTGTTATGACTCATTTGAGTTATTTCTCAAATGCAGGTAACTGACATTTTGGCATCATTTTCTTAGGCTTTTATCCTAACCATATAAAATTAGGCCTAGCTTACATAATTTCTGCTATTAGTTATACTTGGCAGCGTGACATTTTATTTTTTATAATTTAATGAAAATCAGCACCATAGTAGCTGATGGTAATTATACTGACATAGTTACTGGGTGGGGGTGGGGGAGACACTCAGTAACCACATGTTTTACCTGGCCTTTCATGCAAGGGTACGTGCTAGGTGGCTTTATACAGGTTAGGGTACAGATGGAATCGCATCATGACTTTTAGTCTGGTGGATGTGTAGACACTCAAAGATTTAAGCAAGTGCCTTGTGTTTCCTGGAAAATATTAAAACTCATTTGGGTGAAACCTTCCCAGATGATAGTAGTTACTGCTCCTTTGCCTTTTCCTTGGAATAGCTTTTAGTTTGAGTCATGTAGTATAAAACTCCAACACATCCTTGGTTTGCCTTTTTTTTTTTTGTATGTGTAAAACTGTTCATATTTGGGTTTTTTCCCCCAGTATTACGTATAATGGAAAGTCACAGTTGTCTAGCAGAATCTAATCCTTCCTTGGATGTAGTTCCATTTTTAATACTACGTTCCTTCTTCAAATCTTACTACTCTAGCTCTCTGATAAAATTAATTTCTTGTTAATTGTGGTCACAATACAGACCAAACTTTGGTCACAGCTCAAAAGAATTTCCATTTCTTAAGGTGCTCAATAAATCACCTTTACTTTTGAAATGTTAGCCTTTTCAGGTTAGGATCCCTTTCTAGCTTTCTCAATGAATAAAAGAATGTTGAATCTCTGTGAAATGGAATTCATCTGAGCCTCTTGTGGTATATTTGGATAAGTTACATTTTCTTAGTGATAGAGGAGTATGGTTTTAGTTTTTGAAGTACCCCAAATTTTAGAGATTTTGTTTTGTTTTAGGTTAGTGTCTTCTGTGACACCACAGGATATATCATGTTTGTTATCCAGTGTTTTTCACTGGATAACACAGTGAAAAATGTTTTAATTCACACAGTGAATGACCAGTAGATTAACACAGTGACATGTGATTGACAAGCACTTACGGACATTTAAGAAGGCATACAGTTTTACCTTTTTGCTGCAATTTTGGGCTTTTATAGGAGAAATGGGCTGTAAAAGAAGTACCTGTAAACCAGAGAGCATTTAGGAAATTGTTTATGGGTGGTCATGAAGGTGATCTTCAGGATATGAGATACATGGTTTACATAACCTTTGTTCTCCTGATGTGAAGTTTGTTTTCATTTTCCTACAACTCAGCACTTTTGTTGTCCATTACTGTTTACTATTTAGAAGGATTAATGTTTTATTTGCTTTATTTGTGCTTTTCAGAGAGTTGTCATAATCATGGCAGTTATGTTTGTGGCACTATCAGTGCCAGAATTCATGGGAAATTTATCAAATGATTGCAAGTTATTCGGCATCCTAAAGGAAACCGAGGGCTTTTTTGAAAGTCATGTATGTTTTATGATTAGCTTTGTGATCAGAGAGAACAGAGCATTCTGTATCGTCTTGCCTTATGTGACTATTGATCCATGTGACTGTTGATCCTTGTTGTGAAGTAAAAGAGCTTATTTTGTTATACTACTTTGTATGATGAACATAAGTCACACTCTGAAGGAAAAAACCCCAAACTGGAGTTGTCAGAATTTTTATTCCTATTTGCAAAACTCTTAGGTAATAACATCAGAGCTATTTCTTATCATAAACTCTTGATTGTCAGCAAGAGAATTATATGTAGTCGGTTCTGTCCCAGTTGGAATTCCCTTCCCTTTCTAAGCTGTCTCCTTAATAGTATTCATGATGTCAGGATAGTGAGTGTGTAAAAGAAAATGTAGTGAGGTGTTCTGTATCACACATCCAAAATCATGCATTTATGGACTCAAAATCTTTTCAGTTTTTTGAATTATCTATAGCTATTTTATTAGCATGGGTTGTCAAAAATCTCCCAGATTTAAGAGTAAAGAAGAGAAAAGTAATATAAACAAAGAGATGAGGGGAAGAAAATGGCTTCCTTTTTAAGGTGTTATTAATTGTTCATATAGTTTATGACCTAAAAATGATATTTATTTTTAAAAATCCAACTTTGGTACCTGTAACATAGAAACATTGCCTTTTCTATACATTCCTCATCATTGTTTGCCCAAAAAATTATTTTAAGAGTGTATGAGACCAGATTAAATATCCATATTCAGTTTGGTCAAATTTTTAAAACTAAATATTTAAATGAGACTCTATCTTTTGTGTATTTGGTATACATCAACACTTATGCAAATCAAGGATCAGAAAGCAACTGGGGACTAGCCATCTCTGTTTCCCTTTGCACATGGGGTACAGTGGGTGGCATTAGTATGCACTAGCTGCAGTGTTGTAGCACCTTATGGAAGTAAGTAGTGTTAAGTACAATAAAGAAAAAGTTAAGATGCATCTCTGTGGAATATTTACTTTGCAGAGTGTAAAGCTGTCATATCTCTTTCCAGCAGAATTTAACTCCTTCATTCTTTTTTTTTTTTTTTTTGAAAAAAAATCTTAAATAATTTAACATTCCTTTATATCCTCCAAACAGTGTCAAATCTGGGGTAGAACAGATTTTTCCCCCCAAAGGACTCCATCTTTGTTCTTTTGTTCACTCTTTGAAATCCAGTTACAATCAATAGATTTTGAGAATTTATGGCTTCCTGTATCGGCACTGGAGTGGTTGGTTGTGAATATTAAAACCTACTACTGTTTTCCCTCAATAACATGTAATAGCTGTGTTCTTGCTTAGAAGGTATGGTTAGAAAAATGTGAACGATCACTTAAACCAAAGCCAGTTATAAGGAGTATTCTCTCCTGTTGGTTTACCTTCACCTCAGAACTACAAGAATATTACAGTACACAACAGCTGTCTGTAACATTTCTACCAGTTGTTTCAGTGGTATTTCTTGGCATTTCTTGGCACTATGGTTCTCTGTTCTCGGTGATGTCTTATTTTTTTGTGATTAAAAAAAAAAAATAACTGAGTGGGACTATAAATGTAGATGTGTATCAGTACCAAGAAATTCTTTTCTCAAATCTCTATATTTCTGATTTCTATTCAAGTCTTTTAAACATGTTTTTTCTTGCTGAGTAGCAAAGAACTTTTATTTTCCACTTTCCTATATGCTAAAAATGTATGGACACAGCATTTCAATTAACTGAATTGCATATAGTTTTTTTGCTGAAAACTTTATCTGTAAACACGATTGCCTTGTTCAGTTTTGTTGTAAACTGACTTACCATAAGATGCACTGTTGATATGCTTTTTGATGTGTGTTTGTTTGATAAGGGTGATAAAATAAAGCTTAAAAACAAATGAATTGCTTTTTATATTTCAACTATTTCTGTGTTTAGTATAAATATTCAAGTTTAGATAACAGGTAAGTATACTTATTTTATGATTTAATTTTTACTGAGAGCTACCATTGAAAACTTTTCATGTAGCTTCTTTCATTCATTTCTAAAGAATATAATTTTTCACTTTTGAAAATAGTGCATAAACTGACAATACCAAAATGTAATTTTTTATTTTGGAATAAATGTTTTTGATTATGTAGAAACAGGCTTATCTCATGAAAAGAACCAGAATTCATAATTGAGAAACTTGTGTTCTAATCTTGAATCTTTTATCAAGTTGGATGGCTTTAATCAAGTGATTTAATTTCTGACAACAGAGTGAGATCGTAGGTTCAACCATCAGTGTGGAGCATCTCCTAGATGATGGTACTGTTTTAGATTATGTCATGTTTAACGTTCCCTTTTACGTTTATGAAAACTAAAGCCCAAATAGGATAAATAAACTTGCCCAACATTTACTGTGACTTACAGATGGTAATCATATCCTGGTGTGGCATGTTTTTTAGGAAAAAAACCTGGCTGTTCTGTGTGATGAATTCAAGGGAAAGAGACTGCCGAGAAGGATACCCTAAGAGACTGTTTTAAGAGCTCAGACTAGAGAAAAGGAGTATTTAAATGAGTAATTCTCACACTCCGTGTATAACAGAG EMBV3_23676 CAGGAATGCACGAGGACAGAGACTCGAGAGCTCCTTGGTGGAATCAGGTTGTCTTCTAGA Gene GeneID:782201|GNE:XM_002689716:202_cdna Constitutive 0 NULL GeneID:782201 8 GENE GNE NULL glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase EMBV3_23282 CGGCGCGGCCTCTTCGCCGCCGCAGCCTGGGTGCCCAATTACCTGCCGTCGGTGAGCTCG Variant GeneID:540520|PGAP2:NM_001099111:22_cdna 87^261 1 EMBV3_11486 GeneID:540520 15 GENE PGAP2 FRAG1 MGC166328 post-GPI attachment to proteins 2 EMBV3_11138 TGGGCTGCAGCATGCCAGGCTTCACTGTCCTTCACCATCTCCTAGAGTTTGTTCAAAGTC Gene BVV0102_152591 + 1 EMBV3_06783 GK000003.2:119811247-119842343 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189379 1 XLOC_115418 NonCoding TCONS_00189379 XLOC_115418 NonCoding NonCoding - 4:92363498-92363666 - TSS141747 168 1 TCONS_00189379_1 35 0.994047619047619 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00102484927064933 0 0 0 0 0 0 0 0 NM_001102188.1 SGCB Bos taurus sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA. 9e-55 215 89.02 0.970238095238095 0 noncoding GTCATGTCCAACTGTTTGTGACCCCATGGACTGCAGCATGCCAGGCTTCCCTGTCCTTCACCATCTCCCAGAGTTTGCTCAAACTCATGTCCATTTAGTTGGTGATGCCATCCAAGCATCTCATCCTCTGTAGCTCCCTTCTTTTCCTGCCTTCAATCCTTCCCAGCA TCONS_00184816 . 5' 31509 TCONS_00184816 . 5' 31509 EMBV3_08729 GATCGTTGGACGAGTCCTTTATGCTTACGGCTATTACACAGGAGAACCCAGAAAGCGGCA Gene GeneID:507346|MGST3:NM_001035046:8_cdna Constitutive 0 NULL GeneID:507346 3 GENE MGST3 MGC127068 microsomal glutathione S-transferase 3 EMBV3_29794 TGTGCTCCACAGCTACCAGGACCACTTGTGAGCAAATGGACGAGCTGCTGCAGACGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11412 TGCATTGTCCTCACTATCTATTTATTTAGGTTTGGGGTCCGGGAGGGTTGTGGGTAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37898 GCTGGACAAGTTAGATGAATGTGTACGTCTAAACAAGGATTGCTCTGTGTCCTCACAGAC Gene GeneID:615114|SELK:NM_001037489:283_cdna Constitutive 0 NULL GeneID:615114 22 GENE SELK MGC133565 selenoprotein K EMBV3_36100 GGCCCTCTGTAAGTGGTCCTTCCCTTTGTAATCTTGGGTAAGGCACGTGGAAGATGAGTT Gene BVV0102_059331 - 1 EMBV3_20599 GK000016.2:77478681-77485290 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070287 TCONS_00070278 TCONS_00070275 TCONS_00070295 TCONS_00070293 TCONS_00070288 TCONS_00070282 TCONS_00070280 TCONS_00070281 TCONS_00070290 TCONS_00070291 TCONS_00070289 TCONS_00070292 TCONS_00070279 TCONS_00070294 TCONS_00070283 TCONS_00070276 TCONS_00070277 TCONS_00070285 TCONS_00070284 TCONS_00070286 1 XLOC_042182 Coding TCONS_00070293 XLOC_042182 Coding Coding CD46 16:77483007-77522544 = TSS52219 3548 1 TCONS_00070293_3 367 0.135569334836528 10 0.910511938486443 0.000514436802915483 0.000140475009216546 4.7048429318802e-13 0.000447114198236513 0.000581216934035423 1.66574354498432e-11 0.0001763482848866 2.32699662330183e-05 0.000794690361489074 0.000351841877104458 1.36935584847539e-20 7.21622475544625e-09 0.000114750208351356 9.36911864062227e-06 5.52107766669445e-05 0.00736758246143941 9.94898613129581e-16 0.00268459231923352 0.000383868725198543 0.000725463451281869 0.000109245996935846 0.00160282184760433 0.000317172014654811 0.00220854205594253 7.45619178932662e-19 0.000464300492138817 6.341516904826e-13 0.000241109480844276 6.387166678882e-06 2.49270615172732e-11 NM_001242562.1 CD46 Bos taurus CD46 molecule, complement regulatory protein (CD46), 0.0 6379 99.86 0.999718151071026 NM_172361.2 CD46 Homo sapiens CD46 molecule, complement regulatory protein (CD46), 3e-84 318 69.54 0.219842164599775 TCONS_00070293_3 sp|Q6VE48|MCP_BOVIN MCP_BOVIN Membrane cofactor protein; 0.0 649 99.13 0.934604904632153 1 noncoding 1 1 1 1 -0.0590738893040954 0.645585528967213 0.0103262470072497 0.881914931495199 ATGAGGGCGTCTTGCACCCCGCTGAAGGCGCCGCTCCGCCGCCCCGAAAGACTGGCTTCTTCTGGGCGCTTCGCCTGGGTGCTTCTGCTGGCGCCGCTGCTCCTGCTGCCCACGTCCTCCGATGCCTGTGATGATCCACCAAGATTTGTCTCTATGAAGCCCCAGGGTACCCTTAAACCCAGTTATAGTCCTGGGGAGCAGATTGTGTATGAATGTCGTCTGGGTTTCCAGCCAGTAACTCCTGGTCAAGTCCTGGCTCTCGTTTGTCAGGATAATAATACATGGTCGTCTCTCCAGGAGGGCTGTAAAAAAAGACGGTGTCCTACCCTAGCTGATCCCACAAATGGCCAAGTTATCCTTGTAAATGGAAGTACTGCGTTTGGCTCAGAGGTTCACTATGTTTGTAATAATGGTTATTACTTACTGGGGACAAATATTTCTTATTGTGAAGTTTCTGGAACTGGTGTGAACTGGAGTGATAATCCTCCAACATGTGAAAAGATTTTGTGTCAACCGCCTCCAGAAATTCAAAATGGAAAATACACCAATAGCCACAAGGATGTATTTGAATACAATGAAGTAGTAACTTATAGTTGTGATCCTTCAAATGGGCCAGATGAATATTCCCTTGTTGGAGAGAGCAAGCTTACTTGTATTGGAAATGGTGAATGGAGTAGTCAACCCCCTCAGTGTAAAGTGGTCAAATGTGTATATCCAGCCATTGAACATGGAACGATAGTCTCAGGATTTGGACCAAAATATTACTACAAAGCGACGGTTGTACTTAAATGCAATGAGGGTTTTAACCTTTATGGCAACAGTGTAGTTGTCTGTGGTGAGAACAGTACTTGGGAGCCCGAGCTACCAAAGTGTATTAAAGGACATCCCCCCCGTCCTACTGATGCATCACCCCCTAACGGTGCTGAGGGTTTAGGTGCAGGATACATCGTGCTCGTCATTGTTGCTGTACTTATTGGCGTTGGATTATTGCTCTGCCTGTACTGCTGTTTTTGCAGACAGAGGAAGAAAGGGAAAGCAGAATGTAGCGCTACGTACACCACTTATCAGGATAAAGCAACCACTGCAACAGAACAGATGAACTGAACCGTTTCCAGGAACGCATGTACCATTCAGCCATGAAAATGAAGGAAACCTTGCCATTTGCCACAATACAGACAGACCTGAGGGGACTTTGCTGGGTAATAAGTCATGTAAAGAAAGACGTGTACTGTCTGATCTCACTTACACATGGAATCGAAAAAAACAAGCTTTCACAGAAGAAAAATGAGATTTGTCGATGTCAGCGGTGGGGGACTGGTGGGGGTGGGTTTGAGTAAAGGTGGTCAGAAAATACAAACCTTCAGTTATAGGGTGAGAAAGTACTGGGGTATAATTACAGCACAGTGGCTACCATGAGTTACTCATACTGTATTTATGTTGGCAAGTTGCTAAGAGAGTGGATCTTAAAAAGTTCTAATCACATGGAAGAAAAAAGCTTTTTGTAGTATTGACATTATCAAATCATGCTGTACACCTTAAACTTAACGCAATGCCCTCTCTCAATTTTGTCTCAATACTGAAGGAAAAAAAGTATAAAGATTATTTGCCACTTTCTTACACTGTCAGAAATAAAACTGCTAAGCGATAGCCATAGGAACATTAAAACATTTTAATGTGGCAGAAGTATAGTCACTATTCTGTAATGCTTCTTTGAAACATGTATGAATTTAGGTTTAAACACCTTGCCTGTTTTTCCTTAAATAGCACTTGATTTATGGGGTAGGTCAACATGGCATTCTAAGGTAGGGAAATGTGTTTGTTTTTTCTTCTATAAGATCTCCAAACTCAGAGAAATATATTGAAAAATGACATTACATTTCATTTGCAAAGAAAGTGATTTTGAAATCTTTTTTTGTTCAGAGGTGATTACCAATTCTTAAGGTTCATTCTTTGAGTTTCCTAACTAAGAATATTACTGGAAAATACTCTTACATTGAATAGATTAAAATGCTATTTTTAAAAATGTGTAACCTCGTGGTAATTTAGAGATGCTATTAAGTTTTTATCTGGCATTTGTTCTTCACCCCTTTTATTTATAATAAGCCAGTCTGAGAAACCAAGAATTCAGCATCAGTTTCAGGCTTCTATACAAAGTTAGAGTACTGTTAGCACCCATGGCAATAATGCCAGCTCAGGACAAAGTGAATGCTGTGGCCTTATAGTTTTCTTAAGAAGAATTCCACTTTGTTATTATTATTATTGTACTATAGTTTTTTTTTTTTTTTTTCTTAACAATGTTGTATCTGTTTGTGCTGAAGAATTCTACTCTCTAAGAGAATTAGAATCCACTCTAAAGTCTGGCTCTAGGGGCTTTTCTCTGCCCACTTGGATAAAGATATGTCTGTCTTTACACATGTCATCAGAATGTAAGCAGTTTTGTAGGGAATAAATTCAGCAGATAACCTCAGGTTGTATCAGAATCTTAAGTCTTTGTGGGCTCCTCACCTCATCTGTAAAGGGCAGAGTAAAAATGAAGCCCTGTATTTTAGAAAAGCAAACTCAACTCCGTGGATTAACTGTAGGTCACAGAAAGGGAAGGAAAAAGGAGACAGCTCAGGGGGGGTCTGGACACTCAGGTGGAACAGACCCCAGCCCGCTTCTCTGTCCTCACGCCAACGGCCACAGAGGAGGGACTCTGCTCTGACTCAGATTTTTACAGGTTTTGTTTTACACCTTAAAAAAATTGTTTTTCTTTTTTTTTAAATTTTTTGGCCATACCTTGACACGCAGAGCTATCCAAGCTGAGATCAGACCTGTGCCCCCCACAGTGGAAGCACAGAAACCCAACCACTGGACCACCAAGAAGTGGAAGTCGTCACACTTCATAGTTAGTGGCACACACTGGGCCAAAGAAAAGCTGCCTTAGAAAGGTATGAATGAGGACTCGAGGGTGAACAAGAGTAGATGCTGTTTTTCTCCCTGAGGACATGTTTGTAAGGCCCTCTGTAAGTGGTCCTTCCCTTTGTAATCTTGGGTAAGGCACGTGGAAGATGAGTTTGAGCAGAATAAATTCAGGAATTCTGAGACAAATCCAGAGGTGAAGTTTTGCCGCACCCTTTTTATCACATGCTCTTTAAGAATCTAACAGTTTCTCAGAAGCATGGGGGTGGCTGTAGTATGTATTTCTTAAAACCTCAAGGAAATGTTTTCAACCAAAGTTTATTGTGCTTACCAAAATAGGCTTTCACAATAGTTTCCACTTCAGATTTGGTTTTCCAGTGTAACATAGTTATATGTAAGACTGAAATATGTGTACATATAAATAATGTTCTGTCTGCAAATAACTTGTCAATCACTTAAATATATGGAGAAACCATTTTTTTCTAGAAATGTCTGTCTGAATGAGAGGGAAAAGTGTATTTGAATTTAAACTTAAAACTGCAAGAGTGAATCCCCAGTGGAATGAGACGTCTCATGTCTGTATTGTTTTCTGAGAATTGAACCTTTGAGTCTGTTTAAAAAATAATATGTCATTATGGAGAAGTTTC EMBV3_29933 GCTCTGAGACCCAGTGTGAAGGTATATGCTGCTGAACCCTTGAATGCAGATGACTGCTAC Gene GeneID:525340|SRR:NM_001077965:130_cdna Constitutive 0 NULL GeneID:525340 19 GENE SRR MGC151992 serine racemase EMBV3_09567 TGTGTGATTGTTTCAGCGACTGCGGTGTCTGGATCCATTTGTGACGACTTCATGGTGACC Variant GeneID:767910|PLAC8:NM_001076987:31_cdna 226^350 1 EMBV3_33669 GeneID:767910 6 GENE PLAC8 MGC128002 placenta-specific 8 EMBV3_36571 GGCCAGTGGGATTTGATTACAGAACTTACACAGGACTGGGGATACAGACTCTTGGAGGTC Gene BVT0102_005477 - 1 EMBV3_01409 GK000007.2:34127541-34399500 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129995 TCONS_00175639 TCONS_00250174 TCONS_00109167 TCONS_00056479 5 XLOC_078706 XLOC_105418 XLOC_153117 XLOC_065072 XLOC_034282 NonCoding TCONS_00250174 XLOC_153117 NonCoding NonCoding - X:34618806-34619444 - TSS187395 638 1 TCONS_00250174_1 47 1 0 0 0 0 0 0 5.60666691767233e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.18969067532678e-05 0.00302183849039621 0 0 0 1.88189305712502e-06 0 0 XR_227789.1 LOC100335514 PREDICTED: Bos taurus uncharacterized LOC100335514 (LOC100335514), 1e-85 320 89.67 0.377742946708464 0 noncoding GACCCAGAGACCCTCACAGAGACTGAGCCAGACCTGCCTTTGAGTGTTTGAGTGTCTCCTGTGGAGGCACAGATCAGCAGTGGCCTGTTGCAGGGACAAGGGGTCTGTTGGCAGCAGACCTGGGTCACACAGAATATGATATAAGCATTCATGGAGGAGGTTGCTGTTAGCCCCACCATAGAGCCACCAAGCAGACGACCCACAAACTGCAGAACAATTATAGCAAAGAAACGCTTACACTGTTAAGAAAGCTCTAGGACCCACAACACATTTCCCAACCTGGGGATCTGGCAAAGGGACTGAGAACCCCCAGGGAATTTGACTTTGGAGGCCAGTGGGATTTGATTACAGAACTTCCACAGGACTGGGGAAACAGACTCTTAGAGGGTACAAACAAAACCTTGTGTGAACCAGGAGCTAGGAGAAAGGAGCAGTGACCCGACAAGAGACTGAGCCAGACTTGCCTGTGAGTGTCCAGGAGTCTCTGGTGGAGATATGGGTCAACAGTGGCCTGATACTGGGTCATGGGCACTGAATACAACAGTACACACAAGTCCTTTTGAAGTAATTACAGTCATCACCCCTACCATAGTTTGGCCTCAGGCCAAACAACAGGGAAGGAACACAGCCCCACTCAT TCONS_00244139 . 5' 5746 TCONS_00244139 . 5' 5746 EMBV3_36053 CATGCTCCTGAGGTTCCTGAGAAATGTTCTGGTCCTAAACCATCCCCTCCTGACTCCACT Gene BVT0102_150913 + 1 EMBV3_35547 GK000028.2:25791925-25854740 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22774 GACACGGCTGTAGCCCCACACCAAATGTATAGTTGTTAGGAAATGCGTTTCGAGACTAGT Gene BVV0102_314558 - 1 EMBV3_16526 GK000027.2:37240539-37246836 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156442 TCONS_00156443 TCONS_00156444 1 XLOC_095017 Coding TCONS_00156442 XLOC_095017 Coding Coding RNF170 27:37244513-37277348 j TSS116835 3548 1 TCONS_00156442_4 174 0.0856820744081173 7 0.892154474020832 0.000171368857556961 5.29853135215951e-13 0.00053919977548019 5.50505377954551e-05 0.000295403652832893 7.8969958904676e-09 8.3877504534397e-05 1.87804296734922e-06 0.000102179826143503 2.80937001167192e-13 2.26952832375926e-09 2.58260236485237e-08 2.5876580928273e-05 1.74341404381747e-12 2.77888309794959e-12 0.00200156055441668 0.00075760932352713 0.00125848211161738 0.000220901773286443 4.68366897850188e-15 0.000274207227476711 0.000146566126642909 0.000864754721811761 0.000546857121263282 1.62324946493362e-07 2.2274871335111e-07 4.64127362939316e-09 1.09251814470869e-07 1.08322737555043e-08 0.000430775200418871 XM_005226135.1 RNF170 PREDICTED: Bos taurus ring finger protein 170 (RNF170), transcript 0.0 2125 100.00 0.33173618940248 NM_001160223.1 RNF170 Homo sapiens ring finger protein 170 (RNF170), transcript variant 0.0 1375 83.55 0.361330326944758 TCONS_00156442_4 sp|F1MK05|RN170_BOVIN RN170_BOVIN E3 ubiquitin-protein ligase RNF170; 2e-127 363 100.00 0.994252873563218 6 noncoding 0 0 0 0 0.0427145539697896 0.805578401344038 -0.00125569398071665 0.980178890547301 TGCTTTTGAACTTCTGCGAAATTGTGTGTGTCATTTCGTGGCTTTTCATTCCTAACCTGGAATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATGATGATTCAGTCATAGAAGGAAAATGCACATCAAAATATTCACCCAGAAAACCAAGAGCTAGTGAGGGTGCTTCGGGAACAGCTTCAAACAGAACAGGATGCACCTGCTGCCGCCCGACAGCAGTTCTACACTGACATGTACTGTCCGATCTGCTTACACCAAGCTTCCCTCCCCGTGGAGACCAACTGTGGACATCTCTTTTGCGGTACCTGCATTGTTGCATACTGGAGATACGGTTCGTGGCTTGGGGCCATCAGTTGTCCGATCTGTAGACAAACGGTGACTTTACTGCTACCAGTATTTGGTGAAAATGACCAGTCTCAGGATGTTGTCTCATTGCATCAGGATATCAGTGATTATAACCGGAGATTCTCAGGGCAGCCCAGATCTATTATGGAAAGAATTATGGACCTCCCCACTTTACTGAGGCATGCATTCAGAGAGATGTTTTCAGTCGGGGGCCTTTTCTGGATGTTCCGTATCAGGATAATACTTTGTTTGATGGGAGCGTTTTTCTATCTTATATCACCTCTAGATTTTGTACCCGAAGCCTTGTTTGGAATTCTCGGCTTTCTCGATGATTTCTTTGTCATCTTTTTGTTGCTCATCTACATCTCTATTATGTATCGAGAAGTAATAACACAGAGACTAAACAGATGAAAAAACATGAGTTTACTAAAATGTCTGAGCTGATGTATAACATCAGACAAAAGGACCATGGCAGTATGAAGCATCTGAATATTATCTGATGAGCTTAAAACCACTTTATGACAAACATTTGATTATCATTTGGCAAATACCTAGCAATATATGACTGGAATTTTTACATGTTGCAGATTCTAATATTAAGGTTAGAATTAGAATGATTTACAACTGTATCTTGAGTCTGTGTTGTCTATAAACTCTGTGGAAAAATATGGAATTACATTAAATGGGATGCTTATTTTTCTTGTATCTTCTCCGCGCCCCCCCCCCCAAATTACTCAGATTAATTGAATATTTAGTGGGATATTGTCAGATGTAAAGTTTATCAGATTCATCCTTCTCAGTGAGTACCTACATGATAATATACTGCTATGAGCCTCACCAAAATATTTTTGTTACAATAAAATATTGTACGATATTGGGGAAAAGTCAGTGTTTCTTTGAGTACTAGCTAACTTTTGTGCATTTGAAGCAGTTCTGCTTTTCCACTCCAATATAATTCTTTGTTATCAGCTAAAAGTGAAAGAAGAAACTTGAACTTTGTTAATTTGATTTCATTATCTTGGTTTACAGAACACTTAATCAATAGAGGAATTAACAAACTGGAAGACATTTGTCTCCAGTCAGCACACTTGATATTCTGTTACGGCATTTCCTTAAGAGTTTGGTCCTTTTATAGGAGTAGCATTTAAAAGTTTCAATAACTTCTAAAGGGAATTTTGTTCTTCAGGAACCTGGGTGATACAGCAGACACATGGCAGCTCAGTGCCTCCCTCGGGAAGGTGGTTCTCATGACTGTGAGCACCAAAGACCTTAGGAGGGGACTCTTTCCTGCTTTGTGTTAGTTGCTCGGTCGTGTCCAAGTTTTTGTGACCCCATGGACTGTAGCCCAACAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTAGCCATTCCCTTCTCCAGAGGATCTTCCCAACCTAAAGATACAACCTGGGTCTCTTGAATTGCAGGTGATTGTTTACTGTCTGAGCCACTAGGGATGCTTATAGAAGGGTACTAGGAGCACGATTTAAATCTGACTAGAGAAATTAACAGTGGGCTGTAGCAACAGGTTGACAGATTTGGTTATTTTTCTGTCAGAAAACTGTTGTAATACTGTTCCTAGATGGCAGGATGTAGCCCAGATTCATCAGGCCTTGTGCAGAAGGCAGTGAGTTACGGGAGTTATCTCGGTGTTTGGATGGCCACAGCATAAGTCGCTAAGCTCCCCTCTGCAGTTTTCTGTTTGCGAAGAATCAAAACCACAAGTATTATGGCATCTGAAGTCCCTCGGCGGGCACCGCTCATGAATGTCCTGGGCTACAGGACATCCCCGGGCTTGGGCAGCGTCAGCTGTCCCCCTGCAGTCCCCACTGGTCTTCCTGTCCACCCACACGTCAGGGGGCCTCACCGTGGACAGACGGGGAGAAACGTAGATCAGTCCCAGTCTTCAGGTGAGCCAGGTGCTGTCAACTGATGAGATGCTGAATGGTGGTATGTCCACAACAGCGTCTTGTCATTTGGGCCTAAGACCAAGCTGCTGCTTATCAGAGAGGAAAACAAAATTCTTGAGTACAGCACATTGTATTTAAAGCAATTTCCTGCACACTTTTCACTTTACCCTCAAGACAGTTATGTGAAGGAGGCAGGGCATTACCTTCCTCTTCACAGATGAAACTCCTGATGTAGATGAAAGGGTTTTTTTCTGTCTGAAGCCAGGCGCAAGTAAGTGACTGCACTGGTATCAGATGCCTGGGATTCCTACATGGGGAGAAACTGGGATCCTTTGGAAGACGTTTGGAACATACGTAGGAATAGGAAAGGTCTAGAAAGATGACACATCACAGCTACAAGAATCCTGATTCTACAGTTGCCAGTCTACTTCTCACAGGGTAGCACATTTCATAGAGAAACATTTCAGCTGCACTGACTTGGAAAGCAGTGAGTAGGAGTTTGTTACACCACCATTTACTAGTCTCGAAACGCATTTCCTAACAACTATACATTTGGTGTGGGGCTACAGCCGTGTCATTTTTTAAAGGATTTCATTTTCTGTGCATGTGTTCTGCTTCAAGTGCCATGCTTACCACGCTTTTATTGTAATATCTGGAATTCCTTCTACAGCTTTCCTGGTAGAGGTGTATTGTACCAACTTTTGTAACATTCAACACTGTGTGAAGTCTTCCTAAAGTGAAAAGGGGACATGCCGGCATCTCCGAATTCTAGACCTGTTTCTTATGTCACCTTTATTGATCACTGATGATAAATGTAAAGGGATCTGAGTATATAAAGCAGGTAGAGTCAATCAGTATTTTAAACATCATAGTAGTACTTCTGTGATTCAGAGTTAGAGCTTATAAATCAAAGCAACAATTTGGATTTTTATAAACAATAATACTGTAACTTTCACAAAAACAGATGGTCCAACCCCACAAGCAGATGATAACTTGGGCAGCTCTGTGGGGCGCGAGACGGAGGAGACAGTTGTCTAACTGCCCACCAGACCAGTGGTTCCAGCGACCAGCGTTCTCAGCACCTGAAAGCAAGCAGCACAGGACAGGGCTGTGGTGGTCCCTGTGCTGGGCAGATACCTACCTCACAGAGGTGTTTCAGAGGACTGACAGTTTGGTTCAAACTTTGTGATTTAAGAGTTTGTCAAGCAGTTATTCTTTTGAATAAAAGCAACATATGTAAAATTTAACA EMBV3_24987 TCCGTTGCCCAGCTGATTCTGATGCTGCCATTGCCTTTCTGTGGACCCAACATCCTAGAT Gene GeneID:788713|LOC788713:XM_002695576:97_cdna Constitutive 0 NULL GeneID:788713 19 GENE LOC788713 NULL similar to olfactory receptor Olr1522 EMBV3_27761 CAAGACTTCGTCTACGGTCAAGAGCACCCCGTCTGGGAAGAGGTACAAGTTTGTGGCCGC Gene GeneID:508832|LSP1:NM_001075374:254_cdna Constitutive 0 NULL GeneID:508832 29 GENE LSP1 MGC142338 lymphocyte-specific protein 1 EMBV3_37128 TTTTACTTGGCCCCCGTTTTTCTCCCGTGGGTTCATGCCTTCATCTTTGTCCTCTGCCCA Gene GeneID:515303|TCF7L1:XM_002691408:368_cdna Constitutive 0 NULL GeneID:515303 11 GENE TCF7L1 NULL transcription factor 7-like 1 (T-cell specific, HMG-box) EMBV3_33814 CCCCTTGGGGTCAGGAGATGGTCCCTTTAGGCAACTGAAAAATGTTTGGGTCTCACTGCT Gene BVT0102_284223 + 0 NULL GK000019.2:29269339-29278756 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43558 GAGGTGGACAAGTTCTTCCTCGTCGTCCACCAGCGCTACTTCAGAAACTGCCCAGTCTCA Gene GeneID:617017|RAMP1:NM_001083777:20_cdna Constitutive 0 NULL GeneID:617017 3 GENE RAMP1 MGC148675 receptor (G protein-coupled) activity modifying protein 1 EMBV3_15757 AGCTGGAGCGGGAGATCCTTCAGGTGGGCGAAATGATCCAGGATATGGAGATGAAGGTCA Gene GeneID:282338|RGS9BP:NM_001166516:523_cdna Constitutive 0 NULL GeneID:282338 18 GENE RGS9BP NULL regulator of G protein signaling 9 binding protein EMBV3_14441 GGAAACCAAAATCAGCACTGTAACACGATCCCAGGTCCAATGGGTATCAACCTTGTCTGC Gene BVV0102_074808 + 0 NULL GK000004.2:66455590-66491894 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188194 1 XLOC_114237 NonCoding TCONS_00188194 XLOC_114237 NonCoding NonCoding - 4:66479250-66479671 - TSS140562 421 0.536817102137767 1 0 0 0 0 0 0 0 8.31122505181384e-05 0 0 0 0 0 0 0 0 0 0 0 1.70330862648248e-05 0.000802843415634599 1.44215507903975e-05 0 0 0 0 0 0 0 0 0 0 noncoding ACATGACTGAGCAACTGAACTGAACTGACGGAAGTCCAATGTGCAGACAAGGTTGATACCCATTGGACCTGGGATCGTGTTACAGTGCTGATTCTGGTTTCCTAGGTCTGGACTAGGGTCCAGGAATTTTCAAGCATACTTCCAGGTGATATCAATGTTGCTGGTCTGCATATGTTTGAGGAGCTAGAGTATATTATGGATGCTGACGATATAGAATGAACCAAAATCGCAAAATCAAGCAGAGCTGGAGGACAGTGAAGTTACTGACCAGCTATGTGACTTCTGATGTAAACTTCCTGGTATAATTTCTTACTAGCTGTGTGACCCTGGGCTAGTTACTTAAAGGTTTTCCCATCTGATAATGGAAACATAACAGTATTAAACTCATATGTGGTAGTGAAGTGGTAGTGAAGACCAAGCA TCONS_00184330 . 5' 9961 TCONS_00184330 . 5' 9961 EMBV3_36433 ATGCCAAGAGAAGCCTTGCTAGTGAATTTGCTAACTGTGGACAACATGGACCCCCTGTGG Gene GeneID:100139788|LOC100139788:XM_002684863:260_cdna Constitutive 0 NULL GeneID:100139788 1 GENE LOC100139788 NULL similar to pol protein EMBV3_35704 TGGGGAGACTGTCCAAGCACTGACAAGCCAGGGATTTAGCCATGAGGCTTCTGAATGAGT Gene GeneID:782441|NLRC5:XM_002694790:611_cdna Constitutive 0 NULL GeneID:782441 18 GENE NLRC5 NULL NLR family, CARD domain containing 5 EMBV3_03159 CCCATATGCGGCAAGGCCTGGGTGGGTTTGGTGACTTCTGGTGATTTATAGACTCATTCG Gene GeneID:509503|C19H17ORF39:XR_082715:355_cdna Constitutive 0 NULL GeneID:509503 19 GENE C19H17ORF39 NULL chromosome 17 open reading frame 39 ortholog EMBV3_24457 ATTTCTGAGACTCGTAGCAGCCAGAGATGTTGCCGGGTGTTCCAGGCTGAGTGAGAAAAG Gene GeneID:514094|ZSWIM7:XM_002695818:176_cdna Constitutive 0 NULL GeneID:514094 19 GENE ZSWIM7 NULL zinc finger, SWIM-type containing 7 EMBV3_19603 GTTCTGGAATTTTGGGGGAAGCAGTCAGCTGACCTGAAATCATTCTGTGAACTGCAGCTG Gene GeneID:509176|SYCP2L:XM_002697616:127_cdna Constitutive 0 NULL GeneID:509176 23 GENE SYCP2L NULL synaptonemal complex protein 2-like EMBV3_20006 TCTTCAAGTGGGGAGGGTCAGCAGGCCCAAACCCCCACAGGCAAAAGTGACAACACCAAA Gene GeneID:785423|CSNK1B:NM_001098159:123_cdna Constitutive 0 NULL GeneID:785423 X GENE CSNK1B NULL casein kinase I beta EMBV3_08298 GGACCCAGAAGAACATGGCCTGCTTGAAACCCTTGACCCTGGTAGGAAATGGCAATTGGA Gene BVV0102_046145 + 0 NULL GK000019.2:39672759-39726494 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093735 TCONS_00093743 TCONS_00093738 TCONS_00093740 TCONS_00093741 TCONS_00093736 TCONS_00093742 TCONS_00093744 TCONS_00096803 TCONS_00093737 TCONS_00096802 2 XLOC_057241 XLOC_058059 Coding TCONS_00093737 XLOC_057241 Coding Coding SOCS7 19:39648030-39680676 j TSS70251 5671 1 TCONS_00093737_2 544 10 0.826589064175218 0.0178170543456212 0.0083523674755485 0.0109678420187978 0.00834877360243665 0.0077764701902984 0.00155356498960084 0.00512546861708247 0.0110969646749147 0.0161527680176354 0.00297595713782169 0.00083741111156085 0.000286752465397956 0.00324415451588704 0.00212551569802718 0.00122055524810982 0.0022778237209993 2.82741014959709e-07 1.60316043668256e-40 0.00457056917417821 0.0105381936824324 3.30182367178575e-11 0.00119052766341459 0.000142198215448648 0.0003819535778485 0.00944505672188571 0.00267785262943816 0.00731058126129269 5.74247892364348e-05 4.83662210459185e-16 0.00193907392704307 XM_005220608.1 SOCS7 PREDICTED: Bos taurus suppressor of cytokine signaling 7 (SOCS7), 0.0 6019 100.00 0.588256039499206 XM_005257264.1 SOCS7 PREDICTED: Homo sapiens suppressor of cytokine signaling 7 (SOCS7), 0.0 3678 84.53 0.588256039499206 TCONS_00093737_2 sp|O14512|SOCS7_HUMAN SOCS7_HUMAN Suppressor of cytokine signaling 7; 0.0 819 90.89 0.998161764705882 2 coding 1 1 1 1 -0.200426832731667 0.452100764952615 -0.0188478955956542 0.841108482124178 CTCGCGCGGCCCGGCCCGCGGGGCTCCAGGCCGCCTCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGCCGGAGGAGGAGGACGCGGAGGCGGCCCAGGAGCCGGGACCCTCGGAACTGCTCTGTCCCCGGCACCGCTGTGCCCTGGACCCCAAGGCCCTGCCGCCGGGGTTGGCGCTCGAGCGGACCTGGGGCCCGGCGGCTGGACTAGAGGCGCAGTTGGCCGCTCTGGGGCTCGGGCAGCCGGCTGGGCCGGGGGTCAAGACGGTCGGCGGGGGTTGCTGCCCGTGCCCGTGTCCCCCGCAGCCGCCCCCTCCGCAGCCCCAGCCGCCTGCTGCCGCCCCGCAGGCCGGGGAGGACCCCACGGAAACGAGCGACGCGCTGCTGGTCCTGGAGGGCTTGGAGTCGGAGGCAGAGAGCCTGGAGACTAACAGCTGCTCGGAAGAGGAGCTCAGCAGCCCGGGCCGCGGAGGAGGAGGGGGCGGCCGGCTTCTACTGCAGACCCCCGGCCCTGAATTACCCCCGGTGCCCTTCCCGATGCAGGACTTGGTCCCTCCCGGGCGCTTGAGTCGAGGGGAGCAGCCGCAGCAGCCTCCCCCGCCGCCGCCGCCTCCTGGGCCCCTCCGGCCACTCGCCGGCCTTTCTCGGAAGGGCTCCCTCAAAATCCGCCTCAGTCGCCTCTTCCGCACGAAGAGCTGCAACGGTGGCTCTGGCGGTGGGGATGGGGCCGGCAAGAGGCCTTCTGGAGAGCTGGTTGCTTCAGCTGCGAGCCTGACAGACATGGGCGGCTCTGCGGGCCGGGAGCTGGACGCGGGGAGGAAACCCAGGTTGACAAGAACTCAAAGTGCCTTTTCTCCAGTCTCCTTCAGCCCGCTGTTCACAGGTGAAACAGTGTCTCTTGTGGACGTGGACATCTCTCAGCGGGGCCTGACCTCTCCACACCCTCCAACTCCCCCTCCTCCTCCAAGAAGAAGCCTCAGCCTCCTAGATGCATTTCCCCGGATCGCTCCCATCCGAGCAGCCGAATCTCTGCACAGCCAGCCCCCGCAGCACCTCCAGTGTCCCCTCTACCGGCCTGACTCGAGCAGCTTTGCGGCTAGCCTTCGAGAGCTGGAGAAGTGTGGTTGGTATTGGGGGCCGATGAATTGGGAAGATGCAGAGATGAAGCTGAAAGGCAAGCCTGATGGTTCTTTTCTGGTACGAGACAGCTCCGATCCTCGTTATATCCTGAGCCTCAGTTTCCGATCACAGGGTATCACTCACCACACCAGAATGGAGCACTACAGAGGAACCTTCAGCCTGTGGTGTCATCCCAAGTTTGAGGATCGCTGTCAATCAGTGGTGGAGTTCATTAAGAGGGCCATCATGCACTCCAAGAATGGGAAGTTTCTCTATTTCTTGAGATCCAGGGTTCCAGGACTGCCACCAACTCCAGTCCAGTTGCTCTATCCAGTGTCCCGATTCAGCAATGTCAAATCCCTCCAGCACCTTTGCCGATTCCGAATCCGACAGCTCGTCCGGATCGATCACATCCCGGATCTCCCACTGCCTAAGCCTCTGATCTCTTATATCCGAAAGTTCTACTACTATGATCCTCAGGAAGAGGTATACCTGTCTCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGCAAGAGGTGTTGGAACCCTCCACGTAGCGAGGGGCCCCCTGCTGGTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGTTTTAAAGAACCAAATGAAGCCACCATGAAAAGGAGAGTGAAGAAAACACGAGGGAGTAGGAAGGATTGGGATCCTCTGTGCAAGAGACTGGTTCCCCTCACCACCCTGGGGCTTGGATGAAGCACACCAGCGGACTCTGAGCAGGGCTCCACCATGTCACATCCAGCCCTGTGCTCCTGGAGCTGGATGAACTCCCCGGGAAACCGGAAGAAGTCTCAACACTGTTCCTTTTTCAGAAGTTTTGTTTTGTATATTTGCATTTCTCGGTACAGAAGACTCACCCTAAAGGCAACTGGGGTTTGTGCCCATTGGATTGGAAGTGGTGCTGAGGGTGAGCAGGTCTTAGGGAGGGAAGGAGAGGAGAGCAGGTTGCCAGTGATGATCATTCAGCTGGTCCCAAAGGCAGAATTCCAGTCTTCACATTGACCTTGAAGAAGGGGAAAGGAGTCAAGAGTGCAGATCAAGTTGGGAGTTTCTAATTGAGGAGAACCTGCTTCTCTGTAAGCATGGGTAGCTTTAGCAGGAACAGGAAAGAAAGGAGGGTGGATAGTCTTAAATAGAAATGCTGGACAAAACCTGGCACATGGCCCCACTGGGGAAGTAGTGACTCCTCATATACCTTCCTTCTAAGGTTTAGGAACCTAATTTCAGAATCACCTCTCATAGAAGCTATATTCGTTCTGTTTTACTGAATTCTATGACTTCATGTTAGCCCTGTTTCTCTCCCCTCAACCCCTTCCCTCGAGATAACTTCATTTCACTCTGGTCATGGTAACATCATTCCTGTTGCTTCTACCAGCTGTCAAGGCAGTAGTATTTTCATCACCTGAGCAGTTCAGAGCTCCAGTCCCGGGCTGCTGCCGTTAATGGAGCGTGCTTCCAGATTCTTAATGGCAAACGGTACCCATGACTTAGGAGTCAGTGTTCCTTACCTCCATATGTCTGTCAGCTAGTAAGAGGGAATGTGGAGGAGGGTGAGAAAGGAAACTATTGTGCTCTTCCTAGAGAAAGCTCCCTCATGGCTCAGCTTTAATGGGATGTTTGAGATCAGGGAGAGGGAGGAGAGCATTACAGCTCATCTTAGGTTGGTCTGAAACAGGAGGGAGCAAAGGCTTGTTTATTTTCCTGAGTTCTTTCTAGCAACTCAGACATTTTCCTGAGTTAGATCTTGTTTGCCCTCCTTTCATTGGGAAGTCTGTCAGATGCTGATTTGAGAGCTGCCTCTTTTCCAGATAGAAGTAGAGGAAGAGGGAGAAGAATTCCAGTGCTTTTCTGAACTGGGCCATTGTCAAATCACATAGCAGTATGAGTTTGCTTTTCTGTAGAGTTACTCTGGGGAGAAGTTTGTTATTAAGATGTGAAAATTGAGCTGTTTGATCTTTATTACTCTTTTGCAGTAAGTGTTCCAGTACACTGCCTCTTTTGGTTCCCCTGTGTTTAAATCTGCCTCATCTAGTGAGATAAATAATGTCAGGTTTGTGGTTTCCTGATGGTTTAGGGTGAGGCCCCAGTGTTTTGGTGGTTTATAGGACTGCCTCACCTGGAGGCATCGACCTTCTGCCTTACGTCCCGTGTGGAATGACCGTTCCTCCTTTTAGCTGAATAGGTTCATGGAAGGCCAGATGGTCTAGGAAAGCTCTGGAGCTGTGGGACTTTGGTTTTTAGGTGAGGGGAGGACACTGAGAAATGCAGGAACAAGAGCACACAAGCAGATACCTGCACAGCGTGTACTGAACAGTGCACAGCCCCAAGTTAGAGCAGTGGCATCAAAGAATCCTTTTTCTGTGCTGTGATCTAGACCAAAACTTCCTAGTCATCAGGTAGATGTGAATGCTGAGAGGTTATGATGGCAAGGTGGAGCCCAGAGCCAGAAGTCAGCCAGGGGCCCCTGCCCTGCCCGTGGCTGGGGGCTTCACTGCTCTCAGCATAGCCAGAGGGAGGGAGGCAGAGCCCTGGACCCTTTGTGGTACCAGCGGTTTCCACTGGAGGATCTGTACTCAGGTACAAAACCAAACCAGCTGAGGAGGCGTGACCCACCCTCAACCACCGTTCTTTCTCCTGCCGGGAAGGGTAGTGTTGACCATGTCTGTGACCTGTCTGTGCATGAGTCACAGCCCAGGCTATACCCTACTTCTTCCTCAGTAGAGTGGCTACAGAAGAGAATTGTGCCGGAGGAGACAGGCTCCATCCAGAGGTGAGGAGGAAGGGCACCGGCCCAGTCAGTCAGCAGAGGGAGCAGGAGCAGCTGGCCGTCGTCAGCACCTCCCCTTCACCCGCCGGCCGTGCCCCTGACCCTCTGCCAGTTCTGTGTGGTGCTAATTGAAAAGCAGTCTGCAGGAGGAACTCATTCCTTTTTGGTGGTTGCATTTTCAACTCACAGACTGGAAAAGGCTCTCACTTCTAGGGACCCGTCATTGGTTGTGGCTAGGTGATGTCAGTACCTCGGATCTGCCTGTTTAACCTTTGCTTGTTTATGACTGATCTACTGTAACCTTCCTCAGGACAGGTGTGAACCACTGTGATCTAGTGACAGTTACTGCTACAACTTGCTATTACTTGAATTTCGTGTGCTGTGGTCACACAGGAGTGAGGAGGTATGGGGTCTTTGGTGTGGGACTAGATAAATAGGTGACGACTAGGTCTTAGGGACAGTTGGCAATGACCTTGGTCTGGTTGCCTGCCTGTGCCTAGATACAGTGAGTGTGACATCCTGGAAAGCCAGCCCGGGGTGGCAGCTCCCAGCCTCGTGAGGGCAGAGGCGTAGTGGGGAGCCCATCACCACAGTTTCTTCTGCTTTCATGCTTGTCGCTGGGGCTGATTCCACAAGCCCCTTATTAAGGTTGGGAGTGACGTGGGGATGGCCACAGAACCCCTATGCTTCCAGAAAGAACTGGCGAGAGGCAGGGTGGTTAGTGTTCCCAGATCCAGGGTGAGAGACTACAGCAAAGCTGGGTGCCAGCCTTGAAGCCCTCACCCCGGGACCCAGAAGAACATGGCCTGCTTGAAACCCTTGACCCTGGTAGGAAATGGCAATTGGAGGAACTTGCCCCCTAGGTTAGATTCCCCGCTGCCCTGCCACCTCTCCCTAGGGGTTGAGCCCTGAAGTTAGAGGCCTCAGCACTGGGATGTACAGCTCTGCTGCTGGAAGGAGGTCTGAAAGTCTGTGTGTGTGCGTATGTGTGTGTCTTTATTTGCAGAAGTCTTGCCACTAATGGGGGTGTGGAGAGCATCTCCACTGAGGGGAGACCTGCTGTTTGTTGTCCACTTCTAAGAGAATTACATGCCCCTGTCCCTAAGGGAGGAGCTTTTGAGTTAGACATTTTCCCTATGGGAATCCTCTTGGTTTGGTTCGTGGGGAAGGGGGAAGTGGAGAAGTGATTTTTAGCTCTAATTGTCGACACAGCTGTTCTTACACGGAATTTGTGCTATTGCATACATGGAGCCATCTTTCTTTTCACTGCAGCAGTGTTTATCAGTAGTTCAAAATGATTTATTTGCTCCTGGGGAGTAAAACCTTTTTTATTAAAAAATAAAAAGAAAAAAAAAAGCATGCCCCTCTCCCCCCATGATAGCTATAGGATTATTGGGCCACACAGCTCAAGAAGGCAAAGTCAAATCTGCCAGTCCCCGCGATCTATCCTGTTTTGACATTAAAGTCTTCATGCTCAGCACAAAATGGCAGGAGGCCTTGATAAGAGTGAAGCCTTGGGAGGTGTGAGGTGAGAGTTGGAGCATAGAGACAGAGGCACTGGGGACTCAGATACTACAGTTAGAAAAATAGAGTAAGGAACTGTATTTAAATTATCGATTCTCTATAATCTGCCAGGGAAAGACCTTTCTTTACATGCAGATTCCATATTGTCTTTGTCTTTTTCATGCTTCTTGACCTTCCTGGTAGGTGCCCCTGAATTCTTCCTGTTTTCCATCTCTGCCCCTTCTNN EMBV3_07923 TGGGGTAGACTGCTGGATCGACAACACCAGGCCAGCAGGAGGAGTACTACCTGAAGCTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01951 TTAACGACACTGGGACCGAATGACTCTCTGAGGAGCGAACTGCCTTGGGTCTGCTACGAT Gene BVV0102_069578 - 1 EMBV3_15702 GK000007.2:6590077-6615481 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16871 CAGTTTATTAAAAATGACACAAATGACTGGGCTAAATCTACTGTTTCAAAAAAGTGTCTT Gene GeneID:528664|LRRC4C:XM_002693527:123_cdna Constitutive 1 NULL GeneID:528664 15 GENE LRRC4C NULL leucine rich repeat containing 4C EMBV3_40977 CATGTTTATGGAAAGTAGTTCCAGGGAGAGGACCATTACTTCTAGGAAAGCGGGGGCAGG Gene BVV0102_120139 + 0 NULL GK000009.2:77222556-77233237 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237793 TCONS_00237787 TCONS_00237788 TCONS_00237792 TCONS_00237796 TCONS_00237790 TCONS_00237789 TCONS_00237797 TCONS_00237795 TCONS_00237798 TCONS_00237791 TCONS_00237794 1 XLOC_144813 Coding TCONS_00237798 XLOC_144813 Coding Coding NHSL1 9:77231341-77300218 = TSS177684 6711 1 TCONS_00237798_12 1556 8 0.902680178872176 0.00870043429573531 0.00379957313289686 0.00546492446994552 0.0034743496732507 0.00354823543705751 0.00206235737969184 0.00203123678926974 0.00197117413971105 0.00215499492299168 0.000919988492313753 0.000599370641841155 0.000122711268859562 0.000484976685838312 0.00141901703830254 0.00147364255634838 0.00315922939832572 0.00156760221803722 0.000475283878553523 0.00364319998904154 0.00669816541386693 0.00315325451192733 0.000320987296379211 0.000516295365056799 0.00157448546595757 0.00830922215631599 0.00554679572966505 0.00628582987799884 0.000219926161590129 9.86259313155597e-05 0.00084339912093515 NM_001191538.1 NHSL1 Bos taurus NHS-like 1 (NHSL1), mRNA. 0.0 1.210e+04 100.00 0.999850990910445 NM_001144060.1 NHSL1 Homo sapiens NHS-like 1 (NHSL1), transcript variant 2, mRNA. 0.0 4284 77.35 0.791387274623752 TCONS_00237798_12 sp|Q5SYE7|NHSL1_HUMAN NHSL1_HUMAN NHS-like protein 1; 0.0 1964 74.01 0.988431876606684 0 coding 1 1 1 1 -0.153855713531503 0.372569977729485 -0.00557265737799886 0.91876983076254 ATGGTGGTCTTTATTAATACAAAGATCAAGTCTTTGATTAAACTTTTTAAGAAGAAAACTGTTTCCAACCTAGATGAGGAGAGTCGATGGACGGTCCACTACACTGCTCCATGGCACCAGCAGGAGAATGTGTTCCTCCCCACCACAAGACCCCCCTGCGTGGAGGACCTGCACCGCCAAGCCAAGCTCAACCTCAAATCAGTACTGAGGGAATGTGATAAGTTACGGCGGGATGGCTATCGGAGTTCTCAGTACTATTCCCAAGGACCCACCTTTGCAGCCAACTCCAGTCCCCTCTGTGATGATTACCAAGATGAGGATGAAGAAACAGATCCAAAGTGTTCTGTCTCTTCATCAGAAGAGGAAAGACTTACTTCCACCAGGAGACCTAAGACGCCAACGTCAAGTGACTGCTCTGACCTTCATACTCAAACCAACTGGACCAAGTCACTTCCCTTGCCAACACCGGAAGAGAAGATGCGGCAGCAAGCCCAAACAGTCCAGGCTGACGTGGTTCCTATTAACATAACTGGGGAGAATTTCGATCGCCAGGCCAGCCTTCGGCGGTCTCTAATTTACACAGACACTCTGGTAAGACGACCGAAGAAAGTCAAAAGGAGAAAGACTATTACAGGAGTCCCTGACAGCATACAGAAGGAGCTAGCTTCGGGAGCCACTGGCCAAGATGATGTTGGTGGTCACTCAGCATACACCCCAGACCACTACTCTACACTCGGAAGGCTCGACAGCTATCGATCTATGGGACAGCGCTCAGAAACCAGGGATTCCAGCTGTCAGACTGAGGAAGTGAAGGTCGTACCACCTTCAATGAGAAGAATCAGAGCCCAGAAGGGGCAAGGCATTGCTGCTCAGATGAGTCACTTCTCAGGCTCCTCTGGGAACATGTCAGTGCTGAGTGACTCTGCCGGGGTCGTGTTCCCTTCCCGCCTCAACAGCGATGCTGGTTTTCACAGTCTTCCCCGGTCTGGAGCAAGGGCAAATGTTCAGGCCCTGGAGCCACGGCTGGGCGCCCTGGGCCCTGCGGAAGACCTGGGTGGCGCTTTCCCCTACCAGCAGGGTCACCCACAAGTAGATGAAGACTTTGGGCATCTAGGAGCTGCCCCGAGGATGGGAACACTGTTGAGGCCCAAATCTCAGGAGCTGAGGCACTTCGAGGGTGAAAATGTAACCAGCCCTGCGTGTGTGGTGTCTCCTCACACGAGCTACTCCACCAGCATCATCCCAAATGCCACGCTCTCCTCCTCTTCAGAGATCATTGTGATTCACACTGCTCAGAGCTCAGGGCAGCTGGACAGTAAAATTACCAGCTCATCTTCATACTCAAAGGTCAGATCCAGAGACCACCTCCTCTCCAGGCAGAAAGATGGTCATCATTCGTCCAGTGCAACCACACTGCTGTCCCTCTGTGACTCCGAAGTCTCTCTAAATACACCAGCAAATCGGGAGAATGGGTCCCAGGCCATGGCCTATAACTGTAGAAATAACCTTAGCATCCCAGCCCACCCCCAGGATGTGGACAACAAGAGTGAGTCCAGTTATTCAGGCAGCCGGGGCCAGGGTGGTAGCGTGGAGCCCTGGGAATATGGTGGCTCAGGTAGTGGGCGGGCATCCCCACTGAAGCCACATTTGGCAGCTCCTGGTTACTCCACTCCTGTAAGCAACACGAGCAGCTGCAGTTTGGACCAGACCTCTAACAAGGATGATACCAGGTCTGTGTATTCAGAGGACCACGATGGCTACTCCCCTACTCTGCACCCGGACTCTGGACACAGACCTGGGGATCTGTGCAATAGTAATGATGGCTTTGGGAACCCCAGGCACAGCGTGGTCAATGTTTTTGATGGAAGAGCTCAGAGACACCAAGGGGACCGGTCCAATTGCCAAGACAAATCCCTCGCGCGAAGCATTTCTTTGAAGAAAGCCAAGAAGCCTCCCCTGCCACCCTCTCGGACGGACTCTCTGCGCAGGGTTCCCAAGAAGAACGTCCAGTCGAACGGGCAGGTGCTGAACGAGAGCCTGATCGCCTCTCTCCAGCACTCGCTGCAGCTGAACCTCCCGGGCAAGGGCGGCAGCTCGCCCTCCCAGAGCCCCTGCAGTGATTTCGAAGAACCGTGGCTGCCTCGCTCCCGCAGCCAGAGCACTGTGAGCGCCGGCAGCAGCCTAACCTCCGCCACGGCCCCCAACGTCTACTCCGTGTGCGGGCTCACCCCGGCACAGAGCGACACGAGCAGCGTCAAGTCCGAGTACACAGACCCGTGGGGTTACTACATTGACTACACGGGAGTACAGGAAGATCAGGGGAACGCAGGCAGGGCCGGTCCGGCCGGCAGCGCAGCATCACCTGGAAGTGGGCCGGGCCGCCATCTCCTGGAGGGGTCCCGGGCTGCAGTACCCCCAGTGCCCGGTGGCGCCGTCAAACCAAAGATCACATCACCGGAGAAGTCGCACAGAGTCACTTCTCCATCCAGTGGGTATTCCAGTCAGTCGAACACGCCCACCGCTCTCACCCCTGTGCCTGTGTTCTTAAAATCAATGTCACCAGCCAATGGGAAGGGAAAGCCCAAACCCAAGGTGCCAGAAAGGAAGTCGTCTCTTGTATCTTCAGTATCCGTCTCCTCCTCCTCCACGTCTCTTTCCTCGAATACTTCCACTGAAGGAAGCGGGACGGTGAAGAAGCTGGATTCAGCGCTGGTGTCTCCGCTCGCGGCTGCTCCTCACACCTCTCCTCCAGCCCCTTGTCCCGCTGACAAGTCTCCTTTCCTCCCTCCCCCGCCACCTCTGGCAGATTTCTCCGAGGGCTCACCTCTGCCTCGCTCTCCCCTCTTCCCCCCTCCGCCACCAGAAGTGCTCACTCCCTTCTGTGCCCCCACCGACGCCTGCTTTCCTCCGCCCCCTACAGCACTGAGCGCCCCTTTTCTGGATTCATCTGACTCCCTGCCACCTCCGCCACCTGCCTTAACCCCTTCAGTGCCCCCGCCTGCCCCACCGCTTGACCCCAAATTGATGAAAGATGCCAGGCCTTCTTTCAAGAAACCTGGCCAGCCAGAGCCCTCCCGGGAGGCCTGCAGACAGCCTTCCATCAAGGAGGAGGGCAGCAGACTCCCCATGCCCCTGATCACCACCGAAGCGTTGCAAATGGTGCAGTTGAGGCCGGTGAAGAAGAACTCAGGAACCGAGGTAGCCCCCTTACAGGAACACGCATCTCAGGAAAAACGAACTCCGATTGTTTCCCAGTATCATTTAAAGCCATCTGCTTTCCTGAAATCCCGAAATAGCATACATGAAATGGAGAGTGAAAGCCAGCCTGCCTCCGCGACGAGCTCGCTCCCGACTCCTGCCAAGAGCTCGACTCAGGGTCACCAGGACAGTGCAGCCGAGCATGGCCTCCAGAGCCACAGCCCGGCCGGGGAGGCGGAGGCCGGAGCGGGTGCCACCCCGCCCCTCGGCCCGTCGCCCAGCAGGAAGCCGCCCCCCATTTCCAAGAAGCCCAAACTGTTCCTCGTGGTGTCACCTCCGCAGAGGGATTTCACGGCGGAGCCCGCAGAGAACGTGAGCGTGGCGTCTCCCAGCCCCACGAGCGGAGAGGCACGAGAGAGGGGTGCAGCAGGGGCTGGTTCCGATGACACCGACTCTGGCAGCTCGGTGGTTCTTGTGGGAGGAGCTGCAGGATCCGAGTCCCCGGGCAGAGTGGAAGCCAATGTCCCCATGGTGCCAGCCCCTGCGGAGGAGCCGGGTGCCAGGAACGGTGTGGAGCGCTGCCTGCCTCCGCAGGACCCAGGGCCTGGGGTGCCGGAGGCTGAGACAGCCACTTCTTCTTCAGAGACCTGTGACTTCCCTAAGGACGACGGGGGTGATGAGGTGATGACCCCCAGTAGACCCAGGACCACAGAAGACCTTTTTGCAGCTATTCACAGGTCTAAGAGGAAAGTCCTTGGCCGTAAAGATTCAGAGGATGATCACTCCCGAAACCATTCTCCCTCCCCACCAGTGACACCTACTGGTGCCGCCCCCAGCCTGGCCTCCCAGAAGCAAGTGGGGTCCATTCAGAGAAGCGTCCGGAAGAGCAGCACCAGCAGTGACAACTTCAAAGCTCTGCTGCTGAAAAAGGGGAGCCGCTCGGATACCAGCGCCCGCATGTCAGCTGCAGAGATGCTCAAAAACACAGACCCTAGATTCCAGAGGTCAAGGTCGGAGCCATCGCCAGACACGCCCGAGAGCCCGTCAAACTGCTCCCCGAGCAAGAACAGGAGGGCGCAGGAGGAGTGGGCCAAGACCGAAGGCTTGATGCCTCGGAGTCTGTCCTTCTCCGGCCCCAGGTACGGCCGCAGTCGAACGCCGCCTTCTGCCGCCAGCAGCAGGTACAGCGTGCGGAACCGGATCCAGAGCAGCCCCATGACCGTCATCTCGGAGGGCGAAGGGGAAGCCACGGAGCCCATAGACAGCACGGCTCTTCGGGCCCCGGGTGCTACAAGGGGGTGTTCGCTGGATGGACTGGCAGGGGGTGGTGTGGATGAGGGCAGCCTGCTCTGTGCCGGGGGACCCGCTGCCCCGCTGGAGGCCCAGGCTCCTGGTCCGGCAGTGGGGCTGCCCAGCGCAGAGGGCAGGGGCCCTTCAGAACAGCGAGGCGGTCTCGCCGGGGATAAGAGTTAGGGGCGAGAAGCTCCCAGGTGATGTGGGGAGATGTGCAGCACATGGCTCTAGGAAGCCTGACAGGTCCCCTGCCCTGCCTTGTCCCGTGATCCCGCTCAGCATCTGTGCTGTGGGCCCGGGCACCGCCAGCCTCGCCGCGGAGGGGAAGGGCTATTGAGGACTCACGTGGCACTTGCCCTGTGGTTTAAACGCAAGTAGAAGCTTAACTTCTGAAAGTGCTTCCTGGGGAAGATTTTTTTTTTTTTTTTTGCTAAATGCTGGGTGTGTGTGGAGGGATGTGCATGTGTGTGTGCATTCAGAACACTTTTTACATTAAACACACACACACACACCACCACCACCACCACCAGCATGTACAGAAATAGGAGAGAGCTGTTAAGCTAGGTAGAGTAATGGAGCCTTCTGGGCTAGGTGGTAATTGCTTTAAAAGTATCATGTTTATGGAAAGTAGTTCCAGGGAGAGGACCATTACTTCTAGGAAAGCGGGGGCAGGTTTGCTGGTTCTGAGCACATGGGGGTATGGGCTTTCCAGGCGAGCGGGTTGTGGTTACCCCCGAAGGCTGGAAAAGGGCTAAGCGACTAATTGGTTCAGGTACTTCCTTTTTTGTAAAAACGACAGACGTGTGGACATGGCAATGCTGTAACTCAGGGTCTGCTGCTGTGCAGCGGAGACACCACTCCTAGCCTGGTTGGAAGAAATGTGGGTCATTTTCAAATGCCTTGCCTCCCTGAGTAGCAGCTGAGACCTCCTTGGAGAACAGGAATGACAGGGGCCCATGCAGAGAGGGTAATGGAGATGAGAGTAAGGGAGAGGAATAAGTGATACACTGCTGGAATTTGGTTCCTGCTTATTCAATAAAATTGTTTTTCAGAATTAAACTTTAAAACTTGCACTACAGAACTGTGGGTGGAGCCTTTCCTTTTACAACTGTTTTCTTTTTTTTTTTTTTACACCAGAGTTTAAACTTCCATTTGGTAATTTCTTATCACTTGAAATGTCAACATTTGCTAACTTTTGGTTACACCAAAGAAAAAGTTAATGCTATTTTTCCTTGAACTGCCTGCAGTATCATGTCCTCACTTAGAAAGGTTTATCAAAATCTATTATATACTATCTTACTTGGAAGAAAATGCTGACTAGCTCTTTTTGGTCAAATAAACTGATAAGCATTGGCAGGGCTTGGCTCTTAATTAGCCCTGAGCAATGAGTTTTTAGATTAAAAAGATTTTTTGCATCATTTGGTTTGTGTGTTTTTATATTTTTTATAAATAATTGAATTTGGCTAATTACCTTCTAATCTTCTCCGGTTAGAATTTTAACACTTTTAGACGTGGAAGAAAAGTGTGTAAAGTATTTATTTTTATGTGATATTCTTGTGACCACTTCCTCCCAACTGTCGTGTACATAGACTTCTTTATTTGTTGGTTCAATAAAATCAGAGTCTTGTGTTCTTCATCAGAAGGGCCGCAGATGAGCGTACTGAGGTCATTGGCCTAAAGACAGTGCGGTTGCCGATTATCATCTTTTTTGTGTGACAGTATCGTCTAAAAGCTGGACTGCACAGGCCCAGTCATCGCAAGGTTTACACTCTAAAGCGTGACAAACCCATTTCAGATGCATCTTTGAAACAAAAATAAATCTAAAGAATTAAGACTCCTATTCTCTGAAGAAAGCAAAACACGTCTTTTCACACAACCAGATATCAAAACCTGACACTTGGCCAAGAGCAAAAGGACTGTCTACCATTTGGAGCAAGTGTATTCTATTCTACATTGGGCACAAGAATCTTTTATCCTCAATTTCAGAAAAATGACATTGGCTCTCGGATATGAAATCGTCTCATAGCTACCTAAAAAAGATTAAAATGTACTTGGCTATCAGAAAACAAATTTAATATATAAATCATTTATGTTGAAGGTAAGATAAGTACCCTCAAAACTAATGATAAAACTTTTTTTTTAATCCCCATTTGTAAAGGAAAAATATACTAGGTTTTTTCATTCGCTTTGAATAAAACAATTGTAAAGTAAATATTTGAA EMBV3_43333 CACTCAGTTGTTACTAAAACAAAAACAAAACACCGTGTTTGAGGATTTTTTTCCTCCCTG Gene GeneID:513714|KRR1:NM_001037819:5_cdna Constitutive 2 NULL GeneID:513714 5 GENE KRR1 MGC128669 KRR1, small subunit (SSU) processome component, homolog (yeast) EMBV3_28118 GTTCACTAGGAGTCCTTTAATACCCTTTCTGTGAGCAGCAGGCACATGGCTGGGAATGTG Gene BVT0101_028337 + 0 NULL GK000023.2:9052245-9133905 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135883 1 XLOC_082106 NonCoding TCONS_00135883 XLOC_082106 NonCoding NonCoding - 23:9077412-9078556 - TSS101173 1144 1 TCONS_00135883_3 113 0.0751748251748252 1 0 0.000118930962733272 9.66196130743186e-05 0.00110012559318784 0 4.74728058768615e-05 0 3.56834945674596e-05 0 0 0 0 0 0 0 0 0 0 0 0.000119097573214953 0.000157155374378455 4.51113346523868e-05 0 0 0 0 2.46344833158317e-05 0.000379000522423796 0 0 4.20436398478103e-05 XM_005218656.1 TAT PREDICTED: Bos taurus tyrosine aminotransferase (TAT), transcript 2e-11 75.2 93.88 0.041958041958042 XR_249974.1 LOC101929263 PREDICTED: Homo sapiens uncharacterized LOC101929263 (LOC101929263), misc_RNA. 9e-66 255 71.40 0.458041958041958 0 noncoding 0 0 0 0 -0.516198582585306 0.201440228974588 0.0131996462473469 0.850523921855949 CTGCAGTCCATGGGGTCGCAAAGAGCTGGACATGACTGGGGGACTGAACAACACCATCACCGTGGCGTATCATGGAAAACGAGGCACAGCCACGCGGGGCAGAAGTGCCCTGGGATCTTACCACCCGGCCCTGCTACCATCGACCTCAGATCAGAACTATGGCCTCAGTTTCCTCACCTGTAAAGGGAGGGGACATGATGCAATTCCTTCTCACCTTTTCCTCCAGGAGAAGAGGACACAGACACCTGCCCACGAACTAGCCCAGCCCCACAGGGGATGCTGTGTGGTTTTCAACAAGAGAGGCAGGCGGTGGGGATGTGCCAGGGGCCCATGTCCACTTCTGCTGTGGCTTTCAGCTCCTGATGTTCACTAGGAGTCCTTTAATACCCTTTCTGTGAGCAGCAGGCACATGGCTGGGAATGTGGCGGCCCTAAACTAACAGCTGAGAGCTCTACATAGCTCTTTAGGTCACTTTAGCACATTATACCCCTGAGATTCAAACTTTCTCCAAGGTCATGTTAAGATTCAAGTTTGGCGAAATGGAGTGCTGAGTCCAAAAACGAAAACAATCTAAAAGACCAGGGCTGTTTCCTTTACCCCGGTTTACTGAGCGACACCTTTTCTTGCTGTGGTTTCTATAATGGTATTTTATTTTACAATATAAAGGTAAAGAAAAATACTCTCTGCTAACAGAGTAAAACCACATTAATTACACATAGGTTTTATCTTTGTTGCATAGATTCTCCAGCCAAACCACTGCTTGGATTCCCCCTTTGTCTGACCCAGGTAGACAGGCGAGAGGATCAGAGCTGGGATTTTTCTGGTTGGGGGCACCTTGCAGGGGTCAGCCGATTCTTTTAAAGTGCCCTTAACAGGAGCCTATGTTAATGAAAGCAGTTTTCTCATGACAGATCAGAACCTGGCCTTTATAGCATTAAAAAAAATTTTTTTTTACATCGAGAAGAAACGGTGAACAATGATTGAATCAAAGCCGCCCTCAGCAGCCTCCCCCAACTCCACCCCATCTGAGAACAGCCCTGTTTCAATTTCACCACTGAGTTCAGCCTGCCTGCTCCAGACGTCCAGACCTCGCACTCTATAAATCGTCTCTGCCCTTGCCCTGGAGTTGCTGACTATATGTATT TCONS_00133951 . 5' 25115 TCONS_00133951 . 5' 25115 EMBV3_41835 TGATCCCCATTTATGAGATGAATGACCTTAGGAACACAGAGGGAGCTGAACCGTGCCTCC Gene BVT0102_200686 + 1 EMBV3_37343 GK000028.2:19824540-20403638 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159204 TCONS_00159192 TCONS_00159196 TCONS_00159198 TCONS_00159194 TCONS_00159203 1 XLOC_097371 Coding TCONS_00159194 XLOC_097371 NonCoding Coding - 28:19868644-20025248 - TSS119346 836 1 TCONS_00159194_1 57 0.174641148325359 5 0.994693588245436 0.00120384277849368 0.000259893392509314 3.85949692620523e-08 0.00180259632138585 6.89855482554222e-05 9.29339569990732e-14 1.55421901188111e-12 0.00167952688009356 4.01560035059672e-10 2.05144641893313e-08 2.60923441575112e-25 0 2.74530659784324e-05 0 1.782302467761e-08 0.00056866756598644 0 0 0.000198672822935585 4.67011238457365e-07 1.73903259333069e-08 0 2.35156062286912e-08 1.11307787062793e-08 1.03177240468074e-10 2.28443920047654e-61 3.64347892602691e-06 0 0 0 XM_005212203.1 EML5 PREDICTED: Bos taurus echinoderm microtubule associated protein like 5 (EML5), transcript variant X3, mRNA. 3e-06 57.2 83.33 0.0633971291866029 NM_001278655.1 LOC100506115 Homo sapiens uncharacterized LOC100506115 (LOC100506115), mRNA. 3e-06 57.2 84.31 0.0598086124401914 0 noncoding 0 0 1 1 -0.117963971383896 0.442685400943602 -0.0531040005557951 0.372609523634135 CTCCTCTCTTCGCTGCAGCAGGAACGTTCTGGACCACACCAGGCACAGCCTGGGATCTTCACTGTTTGGTCCTGACATCCAGCCGTCGGCATAATCATGGCCCAAGGACCCAGGATCACCAGATGATCCTCTTGCTGTAGCATCAGAAGGGCAGAAAGCTGGATTTCCCTGAATCCTCTTCTCTCTTCTAACCCTGAAGCTGGGTTAGAGTTCACCAATGAGGACAGATCAGAAAGAAGAGATGAAGAAACTGAGACTCAGAGCGGTTAAGTAACTTCCCCATGATCACACAGAAACACAGGGTTGCAGTGGATGGCCCAGTTCTGGTGATTGGTGTGGTGATGGAGGCTGCAGTCACGTTCGGCTCACCTGTCTCGAACGCTCAGAAGGCTCTACATGTATTACCAACATCCATCCTAAAAATGCTGTCAATAGCTATTTCCCCCTTTCCCTGAGGATCCTGAAATACTTTGCATGTGTTCCTCCCTCTGAAAGATACAAGCTTGGTGTTATAGTTGATCCCCATTTATGAGATGAATGACCTTAGGAACACAGAGGGAGCTGAACCGTGCCTCCATGCAACAGCCTCCTTTCATAGTTCATGTTTCTCTCCAGAGATATAAGAATATATAGAAATACAGAAGCCATATTTATGGAAACACAGAAGAAAACATTTTGAATATCCACTTTTATCAGCACTGCGTTTTTCTACCTCACATGAATCCTTGGGTTCATTTAGATTCTTTACTGAAAACTGCATACCCACGTTAGCTAAAGAAAGAAAATTAAAACCTTTTCAGTTATAAAAATGAGTTGGTTGTCTAAATGTTTTTAAC TCONS_00159185 TCONS_00159186 TCONS_00159188 TCONS_00159189 TCONS_00159190 TCONS_00159191 s 3' 59564 TCONS_00159185 TCONS_00159186 TCONS_00159188 TCONS_00159189 TCONS_00159190 TCONS_00159191 s 3' 59564 EMBV3_06628 GCTACCCGAATACCTGCTTAGCTCCTGAAGAGAGAATATGTAGCCTTAGTGGATTTGGGG Gene GeneID:526329|DYNC1I2:NM_001075883:16_cdna Constitutive 0 NULL GeneID:526329 2 GENE DYNC1I2 MGC140044 dynein, cytoplasmic 1, intermediate chain 2 EMBV3_05736 GTCTGTTGCTCAAGATACCAACACTGATGACCTTCCCCACAAGACAGCAAGGGCTTGTTT Gene GeneID:514295|COMMD7:NM_001035291:1048_cdna Constitutive 1 NULL GeneID:514295 13 GENE COMMD7 MGC128998 COMM domain containing 7 EMBV3_32204 TCTTTGCTAAACTGGGGCCAACTGATTAGGGCAGAAGTGAGCATCTTCTGTTTCCCAAGC Gene BVT0102_275527 + 1 EMBV3_38260 GK000010.2:38298832-38300764 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016912 TCONS_00016916 TCONS_00016911 TCONS_00016917 TCONS_00016918 TCONS_00016914 TCONS_00016910 TCONS_00016915 TCONS_00016913 1 XLOC_008934 Coding TCONS_00016910 XLOC_008934 Coding Coding UBR1 10:38298985-38328438 j TSS11699 3184 1 TCONS_00016910_2 106 7 0.892129566752682 6.9577649958035e-10 2.74742772028852e-10 0.000201993203461283 7.45531082228758e-05 4.20645823678361e-29 2.32042565838596e-25 1.94132085844747e-16 3.53302142559972e-05 3.07449387527052e-49 3.52481471737153e-05 0.000150883784530077 1.29604063075263e-74 3.12718246206824e-06 1.68554009052995e-64 5.37853714756292e-51 0.00332040330360096 0.00221611572364053 0.00118184081150011 1.57483473934932e-23 1.92876775673176e-05 1.83567449356306e-05 0.000622929152741398 0.00117479350007621 0.00300432703541759 1.07020277718364e-20 9.72332670221669e-29 9.2556517397888e-05 0.000204819649108858 3.44878290169204e-05 0.00035180557488106 NM_001205897.1 UBR1 Bos taurus ubiquitin protein ligase E3 component n-recognin 1 (UBR1), mRNA. 0.0 2502 100.00 0.435301507537688 NM_174916.2 UBR1 Homo sapiens ubiquitin protein ligase E3 component n-recognin 1 (UBR1), mRNA. 0.0 2922 80.53 0.992462311557789 TCONS_00016910_2 sp|Q8IWV7|UBR1_HUMAN UBR1_HUMAN E3 ubiquitin-protein ligase UBR1; 4e-69 228 99.06 0.990566037735849 0 coding 0 0 0 0 -0.00535849149283652 0.971184563498214 0.0414127171745224 0.412301436248573 CCCTGGTGTGGGTAAAAGATGCTGCAGAAGGAGAATACAATGTACTCTGTAGCTATTTATCTTTACCCACAAATTTGTTCCTGCTTTTCCAGAAATACTGGGATACTGTGAGGCCCCTCCTCCAGAGGTGGTGTACAGACCCTGCCTTACTAAACTGTTTGAAGCAAAAAAGCACTGTAGTCAGGTACCCTAGAAAAAGAAATAGTTTGATAGAGCTTCCTGATGACTATAGCTGCCTCCTAAATCAAGCTTCTCATTTCAGGTGCCCACGGTCTGCAGATGACGAGCGAAAGCACCCTGTCCTCTGTCTTTTCTGCGGAGCCATACTATGTTCTCAGAACATTTGCTGCCAAGAAATGGTGAATGGGGAAGAGGTGGGAGCTTGCATTTTTCATGCACTTCACTGTGGTGCTGGAGTCTGCATTTTCCTAAAAATCAGAGAGTGTAGAGTGGTCCTGGTTGAAGGTAAAGCCAGAGGCTGTGCCTATCCAGCCCCTTATTTAGATGAATATGGAGAAACAGATCCTGGCCTGAAGAGGGGCAACCCCCTTCATTTATCTCGTGAGCGGTATCGGAAACTCCATTTGGTGTGGCAACAGCACTGCATCATAGAAGAGATTGCCAGGAGCCAGGAAACTAATCAGATGTTATTTGGATTCAACTGGCAGTTACTGTGAGCTCCACCTCCACCTGGGAACAATCACGAATAAAGACAGGAATGAAGACTGATTCAAAATTATGGAGACCTTGCTGAAAGCTGGAAGGGTTAGAGGGTCTTTTGCTCCATGTCCAGATTCACATACGTCAATAAAATATTCCTTAATGGAGTATTTCTTTCAATTAGCAAACATGTTTAAAAGGGAAAAAAAAAAAAACAACATAGATTAATCTGGTTTATGTTCCAGAACACTAAAGAATTGCTTCTTCACCCCAAGTGTCTGATTCTGCTAATAGTTCCAGAAAACTCATTTCCCTTCATCATCTGTCCCATTTCACTCCATCCATCTGAAAAGTGAAGTCACATCAAGCAGTTGGCGAGCATTCTTATATATTAACTCTTCTACAATTTGGTTTTTCCCCCAAAATTTGGTTTAGCTAATGGATCACAGACAAGATTTTAATGATATGTGATAGTCTCCCTTGCAGCTAAAGAGGAATTCAGAAACCATGTGGTATACTTCAGTTGAGAAAGTTTTCTAAAAAGTAAACCTTTTATTAATATGTCTCTCTTAAGGAAATGCCCCTCATGTTACACTTACTGTTTCAGCCAAAAATTAAATTTCTCTATGGAGTTTCCATTTCTACGGCAAATTTCTGCTGGTATGGAAATGCTTTCTTTCCTTGAGGTCAAGTTTCTGTAGACCTCAAGAAGAGTTAGGATAGTGTATTCATTATTTATCCCTGATGTGACAAAGCCTGCAATCCTCACCTCTGATGGTGAGGATTAGCTTTGTTGGGTTTTGAAATTATACTTTCATTTTACAAAGGCAAGTTTCTAAAATGAGTTCACTTATCTCTTGATTGTGGCACCACTGTATTTAATTCAGAAACCTATTGCAGTTCTGTTTAAACTATCTATAGAGGGTAAAAAAATTCCCCCAATGAGTGGAGCATTGGATATAAATTAGAACAATCAGATTTAAGCCTGTTCTGTAACCTTCTAATGTCTTTGTAAGACAGATCCTTCATTTGTTATCTGTGTGCAAACTTTTCATAAACTCTGGGTAGATGATGCATACAACCAACCAAAAAAGCCATGTGATCAGTGGTCTGTGTCCTGTTATATATAACATGCTGTGGTTGAGCCATCTTGTTTATAAATAACAGAGCTCTCCTGAATCTGTGCATAGACTTCTTGGCTTTAACTTTTTATATCAAGAACTTGGAATATAAAACAGAAGGCAGAAGAGAAATTGAGATCTTATATTTTAGCTTCTGTTGTCTCTGGGATAAAGTTAGAAGTTTGAAAGATGCATTCAAAGACTATCTTATTTTGCCTTTGGTGACCATGGTCATATGTATTTAGATGTTTTCCTACCTTCTTTTTGCTCAGCAAAAGCAAGCAAGTAAAAATGTATTTGCAAATTGATGATACACATTTGGGGTTAGGTTTTTTGGTATCTTTATGTAGCATAAGAAAGTCTGGATTTTTCAATAAGGGATTGGTATGAACAAGTATCAGAATCACAATCATGATTTTCTACTTGAATAATTATCATTCAGAAAATATCAGGAAATATTAATAGATATAACTCTAGTGAACAATTTATTAACTAGTGGTGGGTGAGGATTAGAAATTTCAATATTCAGTTTGTCAAATTTACCAGTATGATTAAATGATTACATTTCCCTTTATTTCTTATATAATTTGTTGGATGGATTGTCTGGAAAGGTTTGAGCCATTTGCTTGGGAAACAGAAGATGCTCACTTCTGCCCTAATCAGTTGGCCCCAGTTTAGCAAAGATAAATTGCTTTTTCATTTCTAGCCTTTTCCTATCCACTTCATAAATCCTAGAGTTAGGCTCTCAAGCTGCCAGAGGGACTATCCTACAGTGGCCAGTCAGATCTTTACTGCCAAAGAACCCATTTCCTGTTGAGTTCCATTTCCTGAGGTTGACTCAGATTTTTGCACTGTAGATGAACTTATGTTCTCAGTGCTGCCCCCAGCCCAAGGGATTTCTAATTATGTTCAAATATCCTCGTTGTCTGCCTTCATCATTGTAAACAATTTAAAAGCTTATGAACTTTAAAAATGAGCAAAAAGTCACTTTATTTTCTATAGTGTATTATGTGGAGGAACTGGTTCAACAGATTGGCTCCAAGACTGCGTTTTTCTAATGTTTGGTGAGGGGCTGGCAGGAATTTTAATGATGCAGTGAAGAAGAACATATATCTGTATAATTAATTTATTATGTTGGTGTATGGGCTGTGAGGTCACCCTTTAGTGGTCATTTGTCATTTCGTAACAACTATGAATTTTGGTTCACTGTGATGATCATCTATATTTAGTGACTGCAACTTGTTTATACCACTGATTCAAATTCCATCCATGATGAAGTTATACAAATAATGCATATATTGATATCTTTTATTGCAAAATGTAAATTTAAAACTTGTATAATGTTCTGTGCTTTTTGAAATAAAATATCTTATATGTGTATATTTAAAAAGAAAGAAAGGGAC EMBV3_43572 CACAACATTCAACCTTAATTATAGCACAGGTCCCTCCTTGAGCAGCTGTATGTCCAAAGC Gene BVV0102_341105 + 1 EMBV3_25235 GK000013.2:64274275-64357861 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123063 TCONS_00045931 TCONS_00156604 TCONS_00045930 3 XLOC_074617 XLOC_026577 XLOC_095064 Coding TCONS_00123063 XLOC_074617 Coding Coding - 21:21960940-21962060 - TSS91822 1120 2 TCONS_00123063_1 54 1 0 2.69187989325073e-05 2.24296034677259e-06 3.44271285059829e-06 2.16253635533554e-06 1.04044651702991e-05 8.12884117181214e-06 3.93615851886097e-05 2.07467596276812e-06 2.34824872462862e-06 1.10209507784522e-05 1.5329354300948e-06 0 4.98140202114941e-07 1.39999848905057e-06 9.62754632941314e-07 0.00108346911626247 0.00237175344035176 0 1.06024338210584e-05 1.19092888010154e-05 8.73266498824001e-06 2.81086161231792e-06 0.000118771096919783 0.000172136940949479 6.87839887694134e-06 1.81453825724653e-05 6.19670311265686e-06 1.28641174098752e-05 3.61206032420738e-06 0.000183588538514418 XR_240300.1 LOC101902865 PREDICTED: Bos taurus uncharacterized LOC101902865 (LOC101902865), 0.0 728 92.96 0.441071428571429 TCONS_00123063_1 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 9e-07 45.8 45.83 0.87037037037037 0 noncoding ATAGGGACAACAGATATTATGATTAAAGTAGAGGCCTTGACTAATTTCACAAAACAGGCCCTCCTAGATAGAACAAAAGCTATCCTAGCCTTAAATGAAGAGGAAATCCAAATGAGAAAAGTGGTAATTCAAAATAGAATGGTTTTGGACATACAGCTGCTCAAGGAGGGACCTGTGCTGTAATTAAGGTTGAATGTTGTATATGCATTCCTGACTTATCTGGCAATGTATCAACTGCTTTAGATGACATGAAAAACCAGGTAAAAGCAATGTCAAATGAAAACATTCCTTTCTGGACTTCGGTCCTATCTTGGGTGAAGGGCGATTGGTGGGACCTGTGCTATAATTGAGGTTGAATGTTGTGTATGCATTCCTGACTTATCTGGCAATGTATCAACTGCTTTAGATGACATGAAAAACCAGGTAAAAGCAATGTCAAATGAAAACATTCCTTTCTGGACTTCGGTCCTATCTTGGGTGAAGGGCGACTGGTGGAAAACTATACTTACCATTGTTGTAGTTGCCTTGATAGTTCTGCTTTGTGGACCCTGAATTTTACAATGTATTCAATATATTCCTATGAATGATGCTCATAATATAAGTTAAGAGCATCAAGAGTGGGGAATGAAGGAGGAAACAGACAGAGCTGGACTCCATCTTAGGCCAGGCTGTGAACATTAGGCTACACGCATGGTCACCCTCCCAATGGACTCTGAACTTGGTGCCCAGTGTCTATAGAAATGGTATACCCATGGAAAACCAGACCCCCTGATAAAAGAGCCTCAGGACTTGTACTTGGACTCTCCGTTGCCTAAAATAATATGCTAATCTCTCTGTAACAGAACAAAGTGGTAAATTCCATTATGTTTATTGGGATATGACCACAGGCCTATTGATAAATATCCACTGTTTATCTAGTCTTGTGACACATGAATCATGGGTTAAATTTGATCGTACCCCTCTTTTACCTTGTCCAGACTAGTTTCAAGGAATTTGGGGAGGTGGGTTTGAGTAAGTACACTTGAGGTTTATAAGGTTTTTCACAAAAACTGGTCAGGGTCCTTGGCTAAGAGGAGACTCTGCCTTGGGCCCGCAGGTGTAATAAATTGCACTCCACTAT TCONS_00118799 TCONS_00118800 TCONS_00118801 . 5' 35972 TCONS_00118799 TCONS_00118800 TCONS_00118801 . 5' 35972 EMBV3_03767 GCCCCTATTTTTATTATCTTGATCGTCGTGGGATCCATTTGGCTTTTGAAAATCAGTGGC Gene GeneID:516008|CD200R1L:NM_001099374:80_cdna UTR3_Alt 2 NULL GeneID:516008 1 GENE CD200R1L CD200R1 CD200R2 CD200 receptor 1-like EMBV3_41595 TGGAGTGGGGTGCCATCGCCTTCTCCAAGGAAGAACTAGTGAAAGGCTATTAGGTAGCTA Gene GeneID:100300942|LOC100300942:XM_002686291:153_cdna Constitutive 0 NULL GeneID:100300942 3 GENE LOC100300942 NULL similar to eukaryotic translation initiation factor 1 EMBV3_14684 AGCTGTGAATCGGCATAAGGTCTTTCCTCTGTAACTGAACTCAAGCCCCTTGGAGATGCC Gene GeneID:525051|BRD3:NM_001076873:127_cdna Constitutive 0 NULL GeneID:525051 11 GENE BRD3 MGC142472 bromodomain containing 3 EMBV3_41428 AGAGACCTCCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAATGA Gene BVV0102_135775 + 0 NULL GK000009.2:37506062-38308404 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00063808 TCONS_00201120 TCONS_00162571 TCONS_00142473 TCONS_00010832 TCONS_00218950 TCONS_00131534 TCONS_00186556 TCONS_00230831 TCONS_00117596 TCONS_00240372 TCONS_00210949 TCONS_00167122 TCONS_00231774 TCONS_00255144 TCONS_00186493 TCONS_00063807 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00149043 TCONS_00116087 TCONS_00101341 TCONS_00149042 TCONS_00111145 TCONS_00232767 TCONS_00222116 TCONS_00231768 TCONS_00186557 TCONS_00158314 TCONS_00186834 TCONS_00230833 TCONS_00071397 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00178734 39 XLOC_090915 XLOC_038534 XLOC_122768 XLOC_099452 XLOC_086898 XLOC_006383 XLOC_132269 XLOC_080239 XLOC_112608 XLOC_140321 XLOC_071762 XLOC_147036 XLOC_129459 XLOC_101958 XLOC_141262 XLOC_158076 XLOC_112545 XLOC_038533 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_090920 XLOC_070256 XLOC_061582 XLOC_090919 XLOC_067045 XLOC_142251 XLOC_135425 XLOC_141256 XLOC_112609 XLOC_096768 XLOC_112885 XLOC_140323 XLOC_043168 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_108507 NonCoding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_24335 TGGACGACCAGAAGAAGTACCTCAATCCTCTCTACAGTTCCCAGTCTCAGAAATCGGCAG Gene GeneID:540589|MTMR6:XM_002691845:119_cdna UTR3_Alt 2 NULL GeneID:540589 12 GENE MTMR6 NULL myotubularin related protein 6 EMBV3_33495 ACATCAGCAGGAGGACCACGGGCTTCCAGTTTGGCTGCGCCCCACGCTTCAAGGATTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41523 GCCTATGTATCTTCTACCCTCACACATGCATAGCCTCCCCAGCTAGTACTGTCACTCACT Gene BVT0102_265827 - 1 EMBV3_00621 GK000011.2:78975681-79487138 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38581 CTAATAGAAAGTTGCTCATAGTAGCCTACCCTCCCCCAGTCCTCTTTGTTCCCACTTGCC Gene BVT0102_111971 + 0 NULL GK000004.2:115360699-115629671 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182966 TCONS_00182967 TCONS_00182965 1 XLOC_111037 NonCoding TCONS_00182967 XLOC_111037 NonCoding NonCoding - 4:115449167-115454284 - TSS136654 4503 1 TCONS_00182967_1 81 0.0564068398845214 2 0.120211102423769 0.000357824102614545 0.000627288949751159 0.000477674983280054 0.000111540118857492 0.000246237843264007 5.5006373023593e-05 0.000273004795126697 0.000292869904752085 0.00031299693698359 0.000227921800568149 6.26514301823784e-05 1.47816739809709e-05 0 7.24747813660686e-05 0.000302059430935722 8.25865681628176e-05 0 0.000197899143462453 0.000630700062761525 0.00129931451967627 0.000331006152592802 0 4.48832169204359e-190 3.37008311876577e-222 0.00136601446012194 0.000851219213983757 0.0011233045769826 2.1937827956705e-05 4.2679115423017e-05 0 XM_005221991.1 C21H15orf17 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf17 (C21H15orf17), transcript variant X1, mRNA. 4e-45 188 98.17 0.0239840106595603 0 noncoding ATCAACAGACACATTCACTGTAAAATCTGGAAAGTCAGTTTGTAACCGTAAGATGTAAACACCATTATAATCCTACCATTTAATTACTGTTCCTTCAGTGCCCACTAGTTGTGGACTTTGGTTTTGTTTTTTTTTTTTAGGGGATTATTACACTTAAAGTACATCCAAGGAACTAATTTGAAAAGCAGAAAATTGTTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTGAAGTATCTGATTATTTATACGAGAAATAGTACTTATCAAAATAGTTAAAACTAACACATTTTGCTTCCAAATAATCACATTCAGAAATAACCTGAACTAATCTGATGAGGAAGCAGCAAAAAGAAAAACATTTACTCCACAAAGGTAACATTTTAAAAGAAAAACACAAAACAAATGTCAAATAATAAAGAATCTATTTTGAATTAGATAATTCAACAATGCACACTACGGTCTTACCACATTAAATGATTAAAAGTAAAGACAAAAAACGTGGTACTTACCAGGTTTCTAGACTCCTAACAAACTGACAAGCAGTTGCCTATTAAACCACATTAAAGTACCGTCAGGGGATTTAAATAATCAACCAGAAGTAAGAACTTGACTGCCCTTAGGGGAGGAGACTGGTAATGAAGTAACAGTATTTTGAGAAGGACAACACAGGGAGCCTGGCTTCGCTTTAATTACCTCCCTTCGGCTCAGCTAACAGCTACACTGACTTCAGGGACAAGTCGCTATCCCACTAACGGATCATCCTGCATCTCAGGCCACACCTGGCCTCTTTCCTGCATCTCAGGCCACACCTGGCCTCTTTCCTGCTGCATCCAGGGTCTTCTGTAACCCCTGTGCTGCCGAAAGCGATTTCTCCTATAATTTTACTCCAACTCTCAACAATGCTCTTCTCCGCTGCTTCAGGCCTCCCCCACCACTCCTCTGAGCCGAACCATCGGGACCTTCAGCCATTTGATCTCCAGCCTGTCCTGACCGTCCTGCTTCTCTGCGCCCCCATGGCCAGCACCGCATCCCAGCTCGCCTGGGTCTGCGCGTCCTCCTCAAGCCTTTCTCCACAATCAGATGGACTCCCAAAAGCTGTAAACCCGACCCAGCAAGACACTCCAACCCTTTCCTACACCTTCTGATAATGCCCGGGACACTGAAAATCAAACCTTTCCCACTGCCTCTCTTCATTTCATCTGGGCCGCCGATCTGACCGAGCTCCCCTGGCTGCATGCATGGGCTCCTCCCGGGCGGGGACCTCCTGCCTCACAGCGACCCCCACCGCCCAATGGCTGGCGTCTTCCGGCTCTTCGGATACGGCCTCACCTCGTCCTCCTCGGAGAGGCCTTTCCCTAGCACTCCAATGAACCATGGGCTCCCTCACCACACCTGAAGCATCCTCATAATGAACACAACACGGGGTCTTGAATTATTTAGAGGTAGAGTTGGAGCGAGACACATCTAGAGTGAGTTCTCTCAATATATCCACTCAATATTCTTCTCTGAGGAGATCTGGCTAGTGTTGCACATTTTAAATTCCTTTTGGTAGATCATTTAATGCTATTACATCAGTTCTTAAAATATACCATAAAAGGTCATATTCTAAAATAATATTTATTCATCATAATTTAAAAGTTAGTTTGATGCTATAGCTGTATCTCATCTCATAAAGCATTCACACCACATCACATGGATGAAGGAAATGAAGGGCTTTACAGATGAAGACTGCTTACATGCCGTTTTCAACTGCTATGAAAAACTTATACAAAAAGCATGGGTAATTACATTACAAACTTTAACAAGTATGTTATCAAAAAGCATTGGAAAGTAGAGCCCATACTCTTAGATATTTTGACAAAGAAGAAATTACCTTATACCTGAGACCTTAAAACTAGAAACTGCCTGAATTATCAACTTCAGTTATAAATTATCCTTCAGATCTCAGTTGTGATCAAAATGCGTTTACACAGACCACTCAGAAAAGGTCAGCTTCCCCATCTACTGCAATGTGGTTTATCCCATTTTTACAACTGATTTTACCTGTATTTATCTATATAACCATAAGCTTGATGGCAGACACACTATTTTTGCTCACTGCTAAGTAGGCATTCTGTTCAGCACCTATTGAACATCTACTTTCTACATAGCCTTTTTGCACACATATATTCAAAACCCATCAGTAAACACCGTACTACAATACGAAACACTAACTTCATCAGTGGTAGCCAAGAATCTTAGATTTCTTCACCTATTAAAACTTACCAACATATCCCACACACTGTGACTCTTAACCTATGTACAAACTGAACTAGAAACAGGAGGGTTGAAAAAAGGTCAGGAGAATTCAAATTACAAAGAGAGCTAAATATGAATACAACGAACTTGATCTCAAATGCCACAGAAAGTTTAAAAATACTACTCTGCACAGACTGAATTAGGTTCCAACAATAATTACTGTTTGATGTTGGTATTCACCTTTCTGCTTTGAGGCCAATCTCTCAGGTAAATTTCTCAACTTAGTGAATTACACAGCTGTTCCTGTTTCAAGGAAGAGGCAAGTGGGAACAAAAAGGACTGGGGGAGGGTAGGCTACTATGAGCAACTTTCTATTAGAAATCAATCCTGCTGCTGGCTGTGAAGTGTGGTCAGCCTCACGGCTGGAGTCCACAGCCCTCGTGGACTCGATCAGCTCCAAGTGTGGTCAGAGAATGTTCGCGGAGATCCACACCTGAGTCAACCTCAAGTGCACCCTCTCCCAACATACGATGCAAACCAAGATTGCTGTTAACAGGTGAGCCTGATTTAGAGAAAGGGAGGGCAACCAGTAAGAGAAACTGAAGACGTAAGTGCTCATAATTTGTCTTTTTGGTACACACATTCACTCATGTACATTACAGCCATTGCAGAAACAATTCCTTTTTATCACTTACAGAATTCTTTTAACATAAGTCATAGACAAAACTGAGTTCAACATCAAATAGAAAAAGCTTAGTCCTGAGAGTGATTTGATAAGATATACACTAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCAGCTATGGAGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCATCCTACATAAAGTAGAGAAATAGCTGTTGCCATTTTAGCCTTCAGTAATTTAAGAAAGCAAACTTGGCTGGCGCTAGCTGTCATTTTGGTAATGGCTTAAAAAATGTGACAGGCACAAGCACACTGACAGGGATGCGTACTTCTAATCTGTACATCTTGTAGCTTGACACCCCAAAGGGCGAGACACTTTGGGGGATGAAAACTAGTCTCTAAGTGGTTTAGAGCAGTGCTTCTTGGACTTAAGGCTACACGGGGTTCTTCTTAAAATTAACATTTCCACTCAAGCAAAGGTGAGGCCTGAAATTCAGAGTAACAAACTCAAAGGTGATACTGATATTGCTGGTCTGCAGGTCACACTTTAAGCAGCAGGGGTCTGGTCATTTCTCCTAGAAAACATGCCTAAGCCTGAGTAGAGCTGCTCCTCCTGCTGTCTGCTTTCCCACAGCACCTGTGGTCTCCTCTACCGGATCTCACACACACACACACACAGAATAATTAAATAGCAGTTTAGTTCTAAAATGTGTGCAGCCATTAGGCAGCTTTGAACTTGAAAACCTACTACCCTTTTGCATTTCCTGTGGCCAGTGTTTGACTCGGTCAGGCCTGCAGTTATTTTCGCTGGCACATTTCTTTAGAAATAGTTATGAGTCAATGTGTTGGGTTTCAGGACCACCTCTGCAGAACTACATTTAACACATAAATATCACATCCTTCTCAAGTCTCCATTTTCACATGATACCTGCATTATTCTGCAAATCCAGAAAACAGGGCAGACATGGTTTGCTATGTGTCAGGTGCTTTATATATATTATCATTAAATTCTAATAAGCAACTGATGTAGTTTTATGGATGAAGAAATCAAGAAAGTTCACAACCTAACTTGCTTGGTGTCCATGTACAGGAATCTAAGAATAAGGCTTTGAAGCCAAACAACTGTACTATGGAAATGTTTATGTGAATTTATAACAATCAATCTTTCCTAGTATCAATTAATTATACTACAAATATATATAAATGATACTAAATAGGGTTCTTAAAAGTCATTTTTATACAATGTGGTGTAGTATTTAGAAGATACGTGAAAACAATCACTGCTGGCATCTACTCTACGTATTTTATTCCTCACGAAGAATGAAGAGTATCTATCTACTTACTAATGAAACTTTTAAAATAGGTTCTAAGACCAAGTATCAGCATGAAGGTTTACCTCATAATCAAGAACAGACAATTATAACTACTAGGGTAATTTCTTTTAATGAATTACCATTATATATATCAGTGGTATTTTAAATTTTAGTTAAAAGTTGGATATGAAATAATTTATCAAGAATTGAATCTTTATTTGGATGATATGATTTACCG TCONS_00182955 TCONS_00182956 TCONS_00182957 TCONS_00182958 TCONS_00182959 TCONS_00182960 TCONS_00182961 TCONS_00182962 TCONS_00182963 TCONS_00182964 s 3' 88470 TCONS_00182955 TCONS_00182956 TCONS_00182957 TCONS_00182958 TCONS_00182959 TCONS_00182960 TCONS_00182961 TCONS_00182962 TCONS_00182963 TCONS_00182964 s 3' 88470 EMBV3_18699 CCAGTGCCAAACATAGATCATTTACTCACCAACATTGGAAGGACAGGCGTCTCCCCTGGA Gene GeneID:538584|ARHGAP21:XM_002692070:178_cdna UTR3_Alt 2 NULL GeneID:538584 13 GENE ARHGAP21 NULL Rho GTPase activating protein 21 EMBV3_36193 ATGGTCAATGGAACCAGCATATCCTCTTCAAGGCACTTGTCCAGGTGAGAGCAGGCCCCA Gene GeneID:616329|ZNF606:XM_002695451:106_cdna Constitutive 1 NULL GeneID:616329 18 GENE ZNF606 NULL zinc finger protein 606 EMBV3_15199 TGGACCGCATCATTGCCAAACTGCAATCCAAGGAATATTCACAGTACTGAAATTCAATGC Gene GeneID:512327|DHX15:NM_001098018:165_cdna Constitutive 0 NULL GeneID:512327 6 GENE DHX15 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 15 EMBV3_38170 CTACAAGTTCTACCTGGCCTTCGAGAACTCGCAGCACCTGGATTATATCACCGAGAAGCT Gene GeneID:282854|FUT4:NM_174736:2_cdna Constitutive 0 NULL GeneID:282854 15 GENE FUT4 NULL fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) EMBV3_07809 GTGCTCCACACCTGCACCTTGGCTCAGCTTCACGCCACGACTACAAAAATAACTCGGAAA Gene BVV0102_035507 + 0 NULL GK000001.2:125885656-126040088 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002022 1 XLOC_000503 NonCoding TCONS_00002022 XLOC_000503 NonCoding NonCoding LOC100847509 1:125885952-125887104 o TSS1039 1152 1 TCONS_00002022_1 55 1 0 0.00029526158005532 3.48904942831292e-05 2.40990099505453e-05 0 4.28574589591892e-05 3.10508513262089e-06 3.03735040049024e-05 0 2.05472630480568e-05 3.57161027523212e-06 0 1.86233667986286e-05 4.48324651706844e-05 0 0 0.000756584995625013 1.44116972330738e-05 2.17802982131562e-05 0 0.000243459425282093 0.000371560496991445 0.000386492899552401 1.59271787001055e-05 0.000582105539311774 7.21716497659069e-05 0.000110085483035287 0.000528951832718674 0 5.47830696227954e-05 5.21896526433198e-05 0 noncoding 0 0 0 0 -0.954362902096789 0.00421248160735111 -0.0154501094169982 0.802209613616476 GGCGAGGCCGCGGCGGGAGCTCGCCTCCCCCCGGCCCCGCGCGCCGCTCACTCCGGGGGCGGGCCTGCGAGGAAAACGTGGGAGAAGGCGTGAGTTGTGGCGGGACTATTTAGGGGCTTCACCTTCGGCATCTGTCACGTCTGTGAAGACATCTTAAATTAAAGCTGAGTGGGCACCAGGAAAGAGAAGTGTGCGAGGCAGCGTGATAAAAAATGGCAAAGCAGGATGAAGAGAGAACAGACGCGGCCTGGCGTCGCCGGAAAATCTGCCCTAGCCACTGCGAAGGAGCTGGAACTAGCAGCTAATTTGCTCCCGCCAGCTTTCCCAGCCGGTTTCCTTCAACTGAAGGCGTTTTCTTCAACTCCGGGGAGTCTGTCCCAGGGCCTCCCTTGAGGCGCGGGCGGGCCCTTACTTCCCGTCTCGGACTCAGGCCTGCCCCAAGAGCCCCAACGCGTTGCTGTGACAGTAGCCATGGGGACCCGGGCTGCCTGGTGCTCCACACCTGCACCTTGGCTCAGCTTCACGCCACGACTACAAAAATAACTCGGAAATCTGTAGCTCCAGCGCCTTATTTTGGTAGAAGTTTAAGGGAACCCAGACTCTATCTACAGTAGCTGAAATATGCAGTTATAATGCTTTTCAGTTTTAGCGCTAAAGTAATTAAAATGAGCAGTTTTTCTGATGCACAAGTGATTCCTCATGCGGTGTTAAAATATCTGGGTTTTAACCGAGTTAATGATAGGGGTTGAACAATGATGTTTAGGAGACCCATTCACTGGCATGTAGAAATCAACTCTAGAAGGGCTTAATGAAAAAAGTCTGTACTGGTTTCTGTGTGGTGGTCTCAACATTGTTTACTTGTAAAAGAAAGAGCTATACTCGAGAAGTACTGTTGTAGTCAGCATTTTGACCTTCGTGATAAAAGAATTCAAACTTTGGGGGAAAAAAACATACTTGTACAACTAATAAATATATTCAGCGTAGAAGTGACTTTTAAATGATGTTACATTGACTCCAGACAAATTGGGCGGTTTTAGTTCTTCAGTTTGTACAAAGTGACTTGAAGTTTCATAATGCTAAGGATTTTTTGAAGTCTTCGGCAGTAACTTGATTTAACTTACTTTCAGAGCATCCTATAACTTCATGAAATGT TCONS_00002023 s 5' 0 TCONS_00002023 s 5' 0 EMBV3_06424 TGCAAGTACCTTCATGGTCTGTCCCCTACCCTCTGGAGAACGGAAAATGCTGAGGTCACA Gene GeneID:538903|SIGMAR1:NM_001034655:46_cdna Constitutive 2 NULL GeneID:538903 8 GENE SIGMAR1 OPRS1 sigma non-opioid intracellular receptor 1 EMBV3_05864 CCTCTTCGTCAATGGAAAGCTTCCCGTGGTGGACATCCCCACTTCAAGGAAAAGACTTTC Gene BVT0102_168672 - 1 EMBV3_07180 GK000012.2:37794827-38310849 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00061487 TCONS_00166913 TCONS_00118040 TCONS_00061484 TCONS_00009083 TCONS_00222867 TCONS_00061482 TCONS_00166887 TCONS_00061481 TCONS_00040258 TCONS_00223765 TCONS_00176420 TCONS_00031886 TCONS_00061490 TCONS_00251792 TCONS_00211020 TCONS_00061485 TCONS_00232829 TCONS_00115210 TCONS_00061491 TCONS_00198299 TCONS_00061483 TCONS_00147537 TCONS_00207933 TCONS_00010280 TCONS_00188145 TCONS_00115209 TCONS_00251680 TCONS_00125692 TCONS_00061488 TCONS_00175566 TCONS_00031759 TCONS_00000529 TCONS_00198820 TCONS_00061486 26 XLOC_105290 XLOC_036985 XLOC_101749 XLOC_072206 XLOC_004639 XLOC_136174 XLOC_101723 XLOC_024074 XLOC_137064 XLOC_106198 XLOC_018131 XLOC_154733 XLOC_129530 XLOC_142312 XLOC_069472 XLOC_119956 XLOC_089424 XLOC_126448 XLOC_005831 XLOC_114188 XLOC_154621 XLOC_077234 XLOC_105347 XLOC_018004 XLOC_000141 XLOC_120473 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_32753 GCCGCAACAAAGGCCATCTTCTAGATTAAAAGGACACCTTGCCCAGACTCTGCCTGTAGA Gene BVV0102_404882 + 1 EMBV3_36534 GK000007.2:19622976-19640260 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215882 TCONS_00215884 TCONS_00215885 TCONS_00215886 TCONS_00215883 TCONS_00215887 1 XLOC_131109 NonCoding TCONS_00215886 XLOC_131109 NonCoding NonCoding LOC100848538 7:19618649-19640157 = TSS161141 1129 2 TCONS_00215886_2 54 0.202834366696191 4 0.947691449295578 0.00015770432268724 0.000289862470371324 0.000159590727802055 3.92540378470487e-05 0.000415440288088396 9.83182396509192e-05 1.19933600206146e-117 4.9848170037817e-30 0.000327993875933305 1.22509647828364e-07 0.00102469893001785 7.07566274491516e-26 0.000383356329438321 0.000163975260400246 6.18257548811311e-05 0.000389431868391207 1.445413646364e-12 0.000134810925791697 0.000355150095279485 0.000438980855302126 2.85998330714627e-17 5.17803907946635e-09 0.000455976249675584 1.12982259809633e-07 7.31176070642058e-115 2.99378361027523e-51 2.73606478706904e-05 0.000170281297081413 3.21152739595607e-05 7.97243545592954e-43 XR_138745.2 LOC100848538 PREDICTED: Bos taurus uncharacterized LOC100848538 (LOC100848538), 0.0 1166 100.00 0.571302037201063 NR_102302.1 ZNF678 Homo sapiens zinc finger protein 678 (ZNF678), transcript variant 4e-38 163 75.10 0.20903454384411 0 noncoding 1 1 1 1 0.0266977400458092 0.867217097287455 0.00298696189260281 0.967801305666932 GCGGGCAGCTAGCGCCTGCGCGCGGAGCCCGGCACTGAGACGCGCTCTGGATCGCAGTCCGGTTCAGGACAAGCTCGTAGCACGCGCCTGCGCATTAACCGCCCCCGCCTCCTTTTCCCGCCGACCGAGGGGGCGTGGGCAGGGCAGGGCAGGGCGCACGCGCAGTGAGCCTGGAGGGCGCGGCGGGCAACCCGGGATACGAAGTTCTTTACAGCTGCCCGGCCGGAGTGGGTTTTCATGCCCCTGCTTTCCGATTGTTTTCCGGCCCTAACCCCGAGGCTGGAGCGTGGACAGCGGAGGGCGCCGCAACAAAGGCCATCTTCTAGATTAAAAGGACACCTTGCCCAGACTCTGCCTGTAGAATTCATCACTTCCAGCCGGGTGACTTGGGGTTAATCAAAACCTGGAAAGAAGACAAACTCCAACCAAGCTGGAAAGGCCCTTATCAAGTGCTTCTGACGACCGAGACAGCTGTGTGGACTGCTGAAAAAGGTTGTACTCATTATACACGAGTCAGGGGGCCAATAAAAGAGACCTCAAAGGGAAGGGAAAGGACCAATGAACAGCCTTTAAAGGGTCTTTTCCAATGAGCTGGCTCTTCACATCAGATGGCCAAAGTATTGGAGCTTCAGCTTCAGTCCTTCCAAGAAACCTAAAGGGATAATGTGGTGCCCAACCACACAGTCTGGACTACACACACATCTGCCAGTGGCCCCCAACACCCAGATGCGCCATCTCAGAACCCAGCTACCCTTGGTGATGTCTAACTGCTGTGACAGCGAGAAAAGAAGCAGGAAGGGACAAGACGGGAGGGGACCCACAACGTGAATACCACCCGTGACAGTACTGGAACTCAGGGGGCGTCACCCTGGGGTCCAAGCATCCACAACCCGATCAGATCAGTCAGTGCGTGCCAGCCGCAGCCATCAAATCCTCTCCTTCGGTGTGAACACCTCTCCCCTTGCTCCCGGCTGGGGAGGCCCCTCACCACCTTGGCTTTGGCGCTGCTTGGTTCAAAGCGATGTTTGCTCAGAGAATCTTTTGAAAAGTTAACAAGCCTCAGTTTGTCTTTTAACAGGTTGAAACTGTTGTTACTTGCGAGTCAGTAAAGACAACTGACAACAAATCA EMBV3_04378 GCCCAGTGTCCCGTCCTTTCTGTTGTGTAGACGTGGATGACTGTCTAGTGACCCTGTAAT Gene GeneID:507444|TMEM201:NM_001037451:43_cdna Constitutive 0 NULL GeneID:507444 16 GENE TMEM201 MGC128856 transmembrane protein 201 EMBV3_02532 AAGTTTCTTACATAGACTCTCATGCCTTCACCCTTACCCCTGACCCCAAGGATCTGGAGG Gene BVT0102_117347 + 0 NULL GK000029.2:40676162-40681708 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163684 TCONS_00165146 TCONS_00163685 TCONS_00165150 TCONS_00165148 TCONS_00165149 TCONS_00165147 2 XLOC_099991 XLOC_100439 Coding TCONS_00163684 XLOC_099991 NonCoding NonCoding SYT7 29:40680756-40689504 x TSS122627 651 2 TCONS_00163684_3 115 2 0.925803132502572 4.02601511543118e-150 0 2.39612350486151e-76 0 0 0 0.000160465440611329 0 0 1.69902898571915e-05 0 0 0 0 0.00276977728508492 0 0 0 0.000118544230365876 0.000130528523736512 0 0 0 0 8.30213547766755e-95 0.000407725473519663 2.45931157851012e-75 0 0 4.61769311696073e-06 XM_613426.6 SYT7 PREDICTED: Bos taurus synaptotagmin VII (SYT7), transcript variant 0.0 1135 99.84 0.969278033794163 NM_001252065.1 SYT7 Homo sapiens synaptotagmin VII (SYT7), transcript variant 1, mRNA. 3e-68 262 71.45 0.827956989247312 0 noncoding 1 1 1 1 -0.204087324860411 0.187971492132432 -0.0187186506350536 0.693600082279908 CACTTACTTTGTATGATATTCCTCCAGATCCTTGGGGTCAGGGGTAAGGGTGAAGGCATGAGAGTCTATGTAAGAAACTTTTGATATGGGCAAAAATGTGAGCAGAACGCTCAGCTCAAAGGGAAATCTACTTAAGGAACATGGTTCCCAACTGCCCATGCTTTTGCCGTGCAAAGTGGGGGACCTTTTCCAGGGTCTCCTTTCCTGGGGCGTCAGACCCATTTGGGGGTAGAGCCGTGGTCTCATGCCTCGTCCACAGATTGTGGTGTGCTGGCGCCACCTGGCGGCATCTGCCGGGAATGTCAGGCGCAAGCGCGCGGACCCCGGGATTCGAAGGCGTTTTCCAGCTGTCTTGTATCAACACCGGTACCCACGTGGGGATGAGGGGGGCTTAAGCAGGGATCATCTTGAAATCTTCCCTCTCCGTGGAGCTGCTAGTTTTGGTCTCTGCAGCCGCGGAGGCAGGGAAACCACAGTTTCTTTGTCGGGGAGGAGGGCAACCTCAAAGCTCACAGGATCCGGGAATGCTCTCTGCTTCCTCCGCCTTAACCAGGGGACCAGGGGCGGTGGGAAACGTGAGCTGCTCAAGTGATGCAAGGACAGAGACCACGATGGAATGAAAGGGCAAATCTTGACGAAGGGGTCGCTGGT TCONS_00165150 TCONS_00165151 r 5' 0 TCONS_00165150 TCONS_00165151 r 5' 0 EMBV3_42640 CTAACCTGTGTGGTGCCCACCACACTGCAGATGAGTTAAAAAACAAAACTGTGTGTGAAG Variant GeneID:516536|C1H21ORF63:XM_002684582:87_cdna 358^481 3 EMBV3_42293 GeneID:516536 1 GENE C1H21ORF63 MGC155009 chromosome 21 open reading frame 63 ortholog EMBV3_37618 CACTTAAATGGCCTGCTTCGGGAAACGGAAGCCACCAACGCCATCCTCATGGAACAGATT Gene GeneID:539484|GCC2:XM_002691337:505_cdna Constitutive 0 NULL GeneID:539484 11 GENE GCC2 NULL GRIP and coiled-coil domain containing 2 EMBV3_43393 TCATCCGCAACAGCAAGAAGATGCAGAGCTGCGCGAGATCCTCCTCCAGGGCCGCCTCTA Variant GeneID:507027|GRAMD1A:XM_002694927:12_cdna 233^344 1 EMBV3_26102 GeneID:507027 18 GENE GRAMD1A NULL GRAM domain containing 1A EMBV3_22576 ATACCAGAACAGAGAGATCACGGTAACAGGAGTCAGGTGCCCACAACTCAGCTCCACCAT Gene BVV0102_082631 - 0 NULL GK000010.2:45212961-45281368 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25842 GTTTGAAATACTTCCATTACTGCCGTCCCCACATCCTCTCTCACTCATTCTGCCTGCACC Gene GeneID:788623|LOC788623:XM_002693281:66_cdna Constitutive 0 NULL GeneID:788623 15 GENE LOC788623 NULL similar to olfactory receptor, family 51, subfamily V, member 1 (predicted) EMBV3_08450 GAGGGACGGTATCACTGAACCGCAGCTATGCCACCAAAACCCTCAACAGAGGCATCTCTG Variant GeneID:767931|NHP2L1:NM_001077004:228_cdna 62^182 1 EMBV3_32467 GeneID:767931 5 GENE NHP2L1 MGC129115 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) EMBV3_27453 TATCGAGAGAACAACCGGGGTCCACTCATCGTCTTTGGATTCTTGAACTTTATCCTCTGG Variant GeneID:613433|SYNPR:NM_001046506:8_cdna 436^627 3 EMBV3_41475 GeneID:613433 22 GENE SYNPR MGC139775 synaptoporin EMBV3_32624 TGTTGAGGTAGTATCAGTCCCATCTGGTGCTGTTGCACTCTAGAAGATCTCAAATCACGA Gene BVV0101_020366 + 0 NULL GK000030.2:130317160-130423302 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245714 TCONS_00245712 1 XLOC_150807 Coding TCONS_00245712 XLOC_150807 Coding Coding EIF1AX X:130307271-130320455 = TSS184389 4047 1 TCONS_00245712_1 144 0.101062515443538 7 0.693544716680573 0.000392450455320019 0.000627355520804568 0.000354477425835619 0.000194757595186979 0.000263161662763423 0.00013573965209601 0.00023556455828979 0.000128682854592541 0.000648099098388089 0.000156851689429111 0.000110806138120061 0.000159037472249427 0.000135471365649813 0.000334644636281514 0.00029162167701585 0.00430042196244447 0.00228827811058487 0.00369736428324807 0.000294558373045684 0.000348489472300326 0.000120847341743193 0.00244141852388386 0.00278710228657024 0.00321724876839429 0.000436050195314901 0.00032006864227067 0.000320519970115769 0.000344097141210322 0.00024119240475183 0.000450740552254322 NM_001025329.2 EIF1AX Bos taurus eukaryotic translation initiation factor 1A, X-linked (EIF1AX), mRNA. 0.0 1251 99.86 0.171732147269582 NM_001412.3 EIF1AX Homo sapiens eukaryotic translation initiation factor 1A, X-linked (EIF1AX), mRNA. 0.0 1366 77.05 0.431924882629108 TCONS_00245712_1 sp|P47813|IF1AX_HUMAN IF1AX_HUMAN Eukaryotic translation initiation factor 1A, X-chromosomal; 3e-101 291 100.00 0.993055555555556 1 coding AGGTGGAGATAACGGACGCAAGCAGGCGCGACGCCATTTGCTGCGGCCGAGCGTCGGGGAAGGCGGATCTCGGAAGACGTCCGTCGCCCGACTCCCGCAGACGCGACCTGGTCTCTCGCAGCCAGTTCGTGTCACCCTATCTCACGCGTCTCCCTTCAGAGGAGTCGCCGCCACCACTCGGAGAGAAGTCGGGGACGCCTCAAGTGCGTCGTCACCGCCATGCCTAAGAATAAAGGTAAAGGAGGTAAAAACAGACGCAGAGGCAAGAATGAGAATGAATCTGAAAAGAGAGAGCTGGTGTTCAAAGAAGATGGGCAAGAGTATGCCCAAGTAATCAAAATGTTGGGAAACGGAAGATTGGAAGCGATGTGTTTCGATGGTGTTAAGAGATTGTGCCACATCAGAGGGAAACTGAGAAAGAAGGTCTGGATAAATACCTCAGACATTATATTGGTTGGTCTACGGGACTACCAGGATAATAAAGCTGATGTAATCTTAAAATACAATGCAGATGAGGCTAGAAGTCTGAAGGCATATGGCGAGCTTCCAGAACATGCTAAAATCAATGAAACTGATACATTTGGTCCTGGAGATGATGATGAAATCCAGTTTGATGACATCGGAGATGATGATGAAGACATTGATGATATCTAAAGTGAACTCAGCCTCGCACATTCCAGTTTTCTCTGAAGATTGTTCAACAGTTTGGATGTTAACTGTGACTCGTTAAAATAAAAGTTTCATTAGCAGCAAAATTTGCTAAAGCAGAGTGATTTTGTTTCTAAGGTATTTCTTTAAAAACTGGTAATGCTGAATTCTCTTAAGTGAAATGTTAGGCCACTTTGTTCTTTTGGTATAATGGAGCTTGGATAAAAGACATCTGCTCTTTCAAAAAAGGAAAAAAATGGATTACTGCCTTTCCTACTTTGACCACTTCCAGTAATAAGTAAATGGATGTTTTGAATAAACCACTTGCCATACACTCATTATAAATTATAATTAAGCCCTAGTTTTGACTTACCTGTTGACTGTACAATGAATTTTTATATATTCCAGTTACCTAGTTCCCTTAAGATTTTGGTACAATTTAAGGGAAGCAGAAATCTTCATATGAAGTCAAAAATGATCTGTTTTTCATATTTAAGTGGCATTTGGTTATTTTTATACTAACTTTGATATCATATACTTTTTTTTTCATGATCTTATTTTGCCACTGTCACGAAAAAGGCATTTCCAAAGTGCAGTTTTTAGAACCTGGGTTTTAATAGCAATTTTGAATTTGTAGAGTTAGTAGTTGCAGAAGTCAAACACTAGGTGGCACCCAGTTATCTTAACATCGGAGACATTGATATACTTATCAACTTTTTTTTTCTAACTTACTGTTCACGGATGATTTCCCAAACAACAAAAGACTGATCACATGCTATGTAGAATATTTTTGCAAAACAAAAAGATTATGTTCAAAAAGTTTTATTTTCAGAAGTCGTATGTATGTAAACTGGGATTTTGAGTGCTTTATAAACACTTATGTGTAAATGAAAATTTAATTTCATAACTTCTTGTACAAATTAAGCCTTTTGGAAAGTATCTCTAAGCTGGGAAAAGAGGAAGGCATAACAATGAAATGAAAAGATGGTCTACAGTTTCTGAATGGAAGAGCTGCATACAAGGGAGAAACATAAAGTCAGTATTGTGCTGTAGAGAATATTAAACCCTTATTTTGTGTTTAGGATGTATTTTATTATGTGTACAGGTGTTTTTGCTTGTATTTTATTGGCAATTTAGATTTACCCTGTGTTACTTAGTTTTCTATTATCACTTCTAGTAAGATGAAATTAAGGGCAGGACCTAGACCTACATAGAAATCATGAAAGAAGTCCTTGTAGCTTTTAACACTTTTAAGGAAACAGCTTTGAAAAATTTGGCTTTGTGATCGTCGTCATCACAAAGTAATGACGTAAGGAGTAATCTAAACCTCCTAAGATATTTAGGCTTCTGTACATAAGAGTGCTTTGCTAAATGTGTGCCCTATGTAGATCTTTCCTCCACATTATTTTACCAAGAATGTTTTGACCCTGCATCTGTGCTATAGTTCATGGTAGGGGTGGTACAACTCCAACATTGGTTTTTCTACTTCCCTTAACAAATGGTTTGTCTAAAGATTCTTTTCAAATTACAAATATGACACTAATTCTTGTGTTTGCAAGTGACTTTTTTCTTGTTGAGGTAGTAACAGTCCCATCTGGTGCTGTTGCACTCTAGAAGATCTCAAATCACGATGATTAAAATAGTTGGGGTAAACTTGTAGTTCATATGCAACACTACTTGGAGGAATTATTTTACTTGCTTGTCTTTAATGTAAAAATTAATTTGATTATATTTCACATGAATTTGGAATGGAAGTGGTCGTTAAGAAAAAAAAAAATTTTTGTTACGCTATTTGATTATATTTCACATGAATTTGGAATGGAAGTGGTCGTTAAGAAAAAAAAAATTTTTGTTACGCTGTTTGATTCCTATAATACAGTGCTATAAGGTGTGCCCTGAAAGAAAATAAAGTGTTTGAAATCTAAGAATAATGATTCTTACTGCAAAGAGGGTGTAATAGTTACCACTATTGAGTTTGACAGGCTTGTGTTTTTATACAATGTTTATTCCAGTTAGAGTATAAATAAGTTGTATTACTAAGGTGGTTAAATAACCAAACCAAATGTTTGTGTAAAAAAAGAGATTTGCCAAGAATTAATTGTTTGACTGTTGAATCTTTCTTGAACATCCAGCTTCTCAAAGAGACCACCTCTTAAGGAGCCTGTAAACTATGCATGATGAAAATTCTTGTATTTTATTAAGGAAGTGGCCATTGGTTTACTCACCACATCCATGGAATTGTGGCTATAAACATGAAAGTGAAGTCACTCAGTCGTGTCCGACTCCTTGCGACCCAGTGGACTGTAGCCTACCAAGCTCCTCCATCCATGGGATTCTTCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCGAACTCGGGTTTCCCGCATTGGAGGCAGACGCTTTAACCTCTGAGCCACCAGGGAAGCCCATAAACATAGTTGTTGCTTATAAAACTCATAATGACTTAGTTTAACTTAATCTCTTGTGTAAATATATAGGATGTTGCATAACAACTTTAATAAATGCAAACTGTTGTCAATACTGACTTCAGAGCAAGTGAGTAATCAAATAGATAAAAGCATGTTTCAAATAAAATACCTAGCTGGATTTATACTTTATTGCATACAGATTTAACAACATCCAGTGTTGTGTGGCTTGACAGTGAAATAAAAAGTAAGTTCTTTATGTTCCCTTACAATCATAAAGATTAAAAAGATTTGTTCCGGTATGAGATGTTTAGATCTCTATCCTGCTTATTACTAAGGGGAAGTTTCGTTTATACAGTTTGGACTCCCATGAACTTTTGCATACAACTTTGTATTTATTTGCCTTAAAGTAGCTTTTTTGCATTTTTCAGAAAATTTAGAAAAGAAAATCTGAATTACGTCTTACTAGTAAGTGTGATAAAACACTCTTAGGAATTTGGAGAGTGTGTTGGACTGTATCTTCTCTTCCTCCACAGCCGCCTTGTGCTTAGGAAGCCTTGTGATAAGTGAAGAGCGTGGACTCGGGTCAGGCAGCCTGTGCCCCAGCCCCCACTCTGCCCTTTACCTGCCCGTGACCACGCACACTTTCTCCACCTTGTCTGAGCTTCAGGGCCCTCCCCCTGTAAGATGAGAGAGAACAGTACCTGCAGAATCAGCATTATTGGGAGGATTAATAATACGTATTCATATGTGATGCACTTAGAGCAGTGTCCACTACTATTCACTTGATACCTAGGACTGTATAAGATACAATATGCATGCCTTTTATATTCTCAATTTATCATTTTTTTCACTTGCAGTCTTTGGTTCCTATAATAAAAAGTGTGTAGAATATGTTTGTATATTTATGTCAATACCGTATTTAATTGCTACCACCCT EMBV3_30332 AGACTAATTCTCAACTTGGCCGAGGTCACTGATCACAGTTACTTTCAGATGCCAGCTGTG Gene BVT0102_419783 - 1 EMBV3_03328 GK000011.2:103672323-103734903 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19912 AAGAGAGGCACCAGCTACCCTACAGCCAATCCCCGAAGAAGATGAAGACACCACCTCTAT Gene GeneID:515913|SPATIAL:NM_001038121:317_cdna Constitutive 1 NULL GeneID:515913 28 GENE SPATIAL C28H10ORF27 MGC133891 chromosome 10 open reading frame 27 ortholog EMBV3_30351 TAGTGGCTCAGCAGTAAAGAATCCGCCTGTGATGCCGGAGACGTGGGTTTGATCCTGGGT Gene GeneID:534105|RMND1:NM_001102164:5_cdna UTR3_Alt 2 NULL GeneID:534105 9 GENE RMND1 MGC159836 required for meiotic nuclear division 1 homolog (S. cerevisiae) EMBV3_39948 AAACACCTTGAACCCCGGTGCACAGCAAAAACAACAGGGAAACTAATAAAGGGGCCGTCC Gene GeneID:100335809|LOC100335809:XM_002685236:174_cdna Constitutive 0 NULL GeneID:100335809 2 GENE LOC100335809 NULL protease-like EMBV3_05802 TGACCTGGAGCGTCAGAACAACGAATACAAGGTCCTCCTGGGCATCAAAACCCACCTAGA Gene GeneID:510914|KRT23:NM_001101935:112_cdna Constitutive 0 NULL GeneID:510914 19 GENE KRT23 MGC155124 keratin 23 (histone deacetylase inducible) EMBV3_37792 GCACTTGTCTCTGCTGTGTTAAGGGCCTCTTCTACCACTGTTCCACTGACGATGAAGACA Gene GeneID:539402|SPRY3:XM_002699697:23_cdna Constitutive 0 NULL GeneID:539402 X GENE SPRY3 NULL sprouty homolog 3 (Drosophila) EMBV3_32828 GCTGACAGATGCAATGAAAGAACAATAAATGTGGGGCAGCCGTAATGTAAAGGTCCAGCC Gene BVT0102_347364 + 0 NULL GK000007.2:95911453-96122104 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02301 TCCTCTGATGGCTCTGGAGTGAGAAGTCTGAAAAGGGTTTCCCTGGACACAACCAAGATG Gene GeneID:511890|CYP4A11:NM_001077908:125_cdna Constitutive 0 NULL GeneID:511890 3 GENE CYP4A11 NULL cytochrome P450, family 4, subfamily A, polypeptide 11 EMBV3_41418 CTGCGTACTCCAACAGAGGACAAAGTTCTGGCTGTCTTTTACATCATCCTTACCCCGATG Gene GeneID:616716|LOC616716:XM_002689100:28_cdna Constitutive 0 NULL GeneID:616716 7 GENE LOC616716 NULL similar to Olfactory receptor 2L2 (HTPCRH07) EMBV3_37739 AAGACCCTTCACAAGTGGGCAAACCTCTGTCACCCTCCGAGAACTCCTATTGGGGAAAGA Gene GeneID:100336812|LOC100336812:XM_002695484:224_cdna Constitutive 0 NULL GeneID:100336812 18 GENE LOC100336812 NULL zinc finger protein 264-like EMBV3_40690 GCCATCAGCATATGATCTGATAAACAGAGTGATGGACCTAAGGAAGTCAAGGACGTTGGC Gene GeneID:527615|SLC35B3:XM_002697595:59_cdna Constitutive 1 NULL GeneID:527615 23 GENE SLC35B3 NULL solute carrier family 35, member B3 EMBV3_33393 TGCCATACACCACATTCATAGAACACCCGATGGCCGGTGTGGACGAGAAGACAGCCTCTC Gene GeneID:616333|TPRG1L:NM_001076418:213_cdna Constitutive 1 NULL GeneID:616333 16 GENE TPRG1L FAM79A tumor protein p63 regulated 1-like EMBV3_43550 GGGGCCTCCAGTCCAGTCCCTGGCCACCACCGCCCCCCTGACTTTGAGATGACTATCTGA Gene GeneID:100295182|LOC100295182:XM_002694996:202_cdna Constitutive 0 NULL GeneID:100295182 18 GENE LOC100295182 NULL hypothetical protein LOC100295182 EMBV3_40671 TCATTGGCTCCTACCTGATCGCCCATGGCTTCTTCAGTGTCTATGGCATGTGTGTGGACA Gene GeneID:617624|SLC44A2:NM_001098139:108_cdna UTR3_Alt 2 NULL GeneID:617624 7 GENE SLC44A2 MGC151768 solute carrier family 44, member 2 EMBV3_34238 TTTTTCTGTTTCAATTACATCCAATTGTGGATGAGCCTTCATGTAGATATGAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_16129 GATAAAGCTCATGGCCTACCAGCTAGAAAGCATCATCTCTCAGGATTTGAAATAGCTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30457 TGACACACTGGGGGCTGTGGCCAAGCAGGGACTGGAATACACTAATTGTGGGAAAGCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16971 TCGGGGTGACTATTGGCTGCATTCTAGGAATGTTCCCTTTGATCTTCTTTGGAGGAGGTG Gene GeneID:614243|TMEM65:NM_001076318:53_cdna Constitutive 0 NULL GeneID:614243 14 GENE TMEM65 NULL transmembrane protein 65 EMBV3_25397 GCTCTTGAAAATAATGTTTCCCCTCCCGTTTTAGAGTGTCCCTGGACTTTTGGACCAGTA Gene GeneID:614200|CNDP1:NM_001102275:32_cdna Constitutive 2 NULL GeneID:614200 24 GENE CNDP1 MGC179482 carnosine dipeptidase 1 (metallopeptidase M20 family) EMBV3_20897 GCATATTTTACTATAGCTTATAGAAGTCAGGAATTTTTTAGAGACACTATAGCTAGAAGC Gene BVV0102_361165 + 0 NULL GK000030.2:24419675-24737904 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16659 TCTACGCTCTCAATGACAAGCTCTTCGCTAAGTTCGGGCTACGCTTTGACATCCGTCTCC Gene GeneID:540535|POPDC2:NM_001099112:110_cdna Constitutive 0 NULL GeneID:540535 1 GENE POPDC2 MGC152485 popeye domain containing 2 EMBV3_39523 TGGAGAACAAAACCTTCCTGGAGAAGCTCAAGTTCGGCATTGGGGATGGCAACCTACAGT Gene GeneID:281351|NMT1:NM_177504:182_cdna Constitutive 0 NULL GeneID:281351 19 GENE NMT1 MGC133879 N-myristoyltransferase 1 EMBV3_03495 AAGCTTGTAGATGATGAAAACCTGGTGGGCTGCAGAACCATTTGGAAGAGGCGACTAGGG Gene BVV0101_069199 + 1 EMBV3_04757 GK000024.2:51045253-51115768 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143289 1 XLOC_087711 NonCoding TCONS_00143289 XLOC_087711 NonCoding NonCoding - 24:51050394-51050932 - TSS107500 538 1 0 0.00144149528965877 0 3.44015331686141e-05 0.000277834135028367 4.58845657258234e-05 6.64880425715199e-06 0 0 0 0 0 3.32312672200408e-05 0 0 0 0.00427102064976463 0 0.000186549647478702 0.000279905574523771 0 0 0.00165516820058551 0.000153469119332335 0.000218127361754948 0 0 3.26718630378188e-05 8.92674092183178e-05 0.000162422044182211 0 XR_243850.1 SMAD4 PREDICTED: Homo sapiens SMAD family member 4 (SMAD4), transcript 8e-170 600 85.66 0.990706319702602 0 noncoding 0 0 0 0 0.0383886572395944 0.735749360020983 -0.00434016216415865 0.958367942445854 AGGGTAGGGGGGTTGGGGAGTCCTGGTAGAGGCCAGCTCAGTGGTAGCTGGAAAGGAAGGGATGAAACCAGCTGCTGTTGCTATGGCTGCTTGTCATTGATAGAAGGACTCAGGGCTTGGATCGGTTAAAAGGCTAAACACGGATTCAACAAACTTCTTCCAAGTATTGGGTTCTGGCCACTGCCTTGGACGTGTGATTTAAGGGAAAAGTGTGAAAGCTTGTAGATGATGAAAACCTGGTGGGCTGCAGAACCATTTGGAAGAGGCGACTAGGGGTTGGGGACAGATTTGGCGGTAGTATCTGCCAATTCTGTCTCCTCTCCTGAAGTCAGAGGAGCCATGCCGTAACTCAAGAGACGAGCCACACTTAGCTTCTGCTTTGGGGAAAACTGATCAGCTAAGGGCTCTGGTAGGTCCTTTGTGGCTTTCTGTATGCTTTTGCCTGGTTGAAGTCTGTGGCTAAAAAACAGTTGAACCTTTCCTGAGAACTCTGTAACAAAGTATGTTTTTGATTAAAAGAGAAAGCCAATTAAATCAT TCONS_00139275 TCONS_00139276 TCONS_00139277 TCONS_00139278 TCONS_00139279 TCONS_00139280 TCONS_00139281 TCONS_00139282 . 3' 2933 TCONS_00139275 TCONS_00139276 TCONS_00139277 TCONS_00139278 TCONS_00139279 TCONS_00139280 TCONS_00139281 TCONS_00139282 . 3' 3470 EMBV3_13684 AATTTGCGAGATTTCTTCCGGGGAAAAGGGCTGGGATTCAGGCCTCTGTCTGAGCTTGGA Gene BVT0102_167811 - 1 EMBV3_33313 GK000014.2:18333426-18386656 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052887 TCONS_00052889 TCONS_00052888 1 XLOC_031601 Coding TCONS_00052889 XLOC_031601 Coding Coding ZHX2 14:18368118-18466300 j TSS39153 4531 1 TCONS_00052889_4 838 4 0.953891282427354 0.00109120204750034 0.000895838596508311 0.000503474283493462 0.00126652438825015 0.000596322157942047 0.000206708788745095 0.000554637531908207 0.000115741783540118 0.000712959818854931 5.99248781896835e-05 2.53962510855899e-08 1.05106911406969e-10 1.11961807591683e-07 0.000136724745616463 0.000217166850647415 1.68325338521613e-53 0 0 0.000657391518140412 0.000997993493411714 0.000932190538496663 0 0 6.46032573017223e-10 0.000834572998148233 0.00078897662571962 0.000612115407379003 0 0 0.000106369504125788 XM_005215362.1 ZHX2 PREDICTED: Bos taurus zinc fingers and homeoboxes 2 (ZHX2), 0.0 7337 100.00 0.897594350033105 NM_014943.3 ZHX2 Homo sapiens zinc fingers and homeoboxes 2 (ZHX2), mRNA. 0.0 4379 84.07 0.89781505186493 TCONS_00052889_4 sp|Q9Y6X8|ZHX2_HUMAN ZHX2_HUMAN Zinc fingers and homeoboxes protein 2; 0.0 1576 91.17 0.998806682577566 3 coding 0 1 1 1 0.0017610368228998 0.988570208243711 0.0047801138729649 0.922325991723846 GTGTGCGCTGCAGGTGGGCCTCGGCCGGCTGCAGAAACCTCTAGAGCTCAGGCCTCGACTTGCCACGCTGGGAATGAACGCTTCTTCGCTCTCCTGAGGAATTTTCAGAGCACACAGGGCTCAGCCCAGCAGGAGTCTCCCAGGGCGGAAATCCACATGGAGGGCTTTTGTTTCCAGGACTGCCGTATCTTTTGGACTTGAGGCCTGTCGGCAAAGCTTTCCTTCTCCACCCTCACCAACTGTGAACCTCTGTTGCTGCCAAGGAACCGACACCAGGGACTGAAGGCAACTTGGAGTGGGGGTTCAGGAGACGCGTCCCCAGCCCCACCCAGCACATCTTGCTTTTAGTTTCACTCTCCTAAAAGGCCTGCTTCTCAGAAAGCTGCTGACTCACCCAAGAGTGTGAGGGTCTTTTTTTTTTTTTCTTTTTCTCAGCATCACCACAAAGCCCCAAGATTCTTGAGGTCTTGACGCCCTGACTGCTCTGGAGTCGAAGTAAAAAGATTCCCAGGATGTAAGCAACACGGGAACTGGTATGATGCTGCCTCTTGCGTTCTGCCGTTGGAACAGTTAGTTTTCTGTGCTGAAATCATTTTGGGAAACTCAAGCACTAGACTTCAGCGTTCAAGGGAAGCCAAAGCCATTGGAGGGGGCAATAAAGCCAAAAACTTTTTATCTGAGTAGTTCCAAAAATTTCACTGCCCCTTCCCCACCCACCCCCATCCCCCAAATAAGCCATTGCACACAGACAGGCAGCATGGCAAGCAAACGAAAATCCACCACCCCGTGCATGGTTCGGACATCACAAGTGGTAGAACAAGATGTGCCCGAGGAAGCAGACAGGGCCAAAGAGAAAGGAATTGGCGTGCCACAGCCTGAAACGGCCAAGGATACTTGGGCAGCGGAACCTGAAAACTCTTCCAAAGAAAATGAAGTGATAGAGGTGAAATCTACAGGGGAAAACCAATCCAAAAAGCTCCAAGGTGGTTACGAATGCAAATACTGCCCCTACTCCACGCAGAACCTGAACGAGTTCACGGAGCACGTTGACATGCAACACCCCAATGTGATCCTCAACCCCCTCTACGTGTGTGCCGAATGTAACTTCACAACCAAAAAGTACGACTCCTTGTCTGACCACAACTCCAAGTTCCATCCCGGGGAGACCAACTTCAAGCTGAAGCTCATCAAGCGCAATAATCAGACAGTCTTGGAGCAGTCCATCGACGCCACCAACCACATCGTGTCCATCACCACCAGCGGCCCCGGAAGCGGGGATGGTGACGCCGGGATCTCAGTGAGTAAAACCCCCATCATGAAGCCAGGGAAACCAAAAGCCGATGCCAAGAAGGTGCCCAAGAAGCCGGAGGAGGCCACCCCCGAGAACCATGTGGAAGGGACCGCCCGCCTGGTGACAGATGCCGCTGAGATCCTCTCGAGACTCGGGGGCGTGGAGCTCCTTCAGGACTCGCTAGGACACGTCATGCCTTCTGTCCAGCTCCCACCAAATATCAACCTTGTCCCCAAGGTCCCCGTCCCGCTGAACACTACCAAATACAACTCTGCCCTGGATACCAACGCCACCATGATCAACTCCTTCAACAAGTTCCCCTACCCAACCCAAGCAGAGCTGTCCTGGCTGACGGCGGCTTCCAAACACCCGGAAGAGCACATCAGAATCTGGTTTGCCACCCAGCGCTTAAAGCACGGCATCAGCTGGTCCCCGGAGGAGGTGGAGGAGGCCCGGAAGAAGATGTTCAACGGCACCATCCAGTCCGTCCCCCCGACGATCACCGTGCTGCCTGCCCAGTTGGCCCCCACGAAGATGTCACAGCCCATCCTCCAGACGGCTCTCCCATGCCAGATCCTCGGCCAGACCAGCCTGGTGCTGACTCAGGTGACCAGCGGGCCAGCGACCGTCTCCTGCTCCCCCATCACACTTGCTGTGGCTGGAGTGACCAACCATGGCCAGAAGAGACCTCTAGTAACTCCCCAGGCTGCCCCCGAGCCCAAGCGCCCCCACGTCGCTCAAGTGCCAGAGCCCCCACCCAAGGTGGCCAACCCCTCGCTGACCCCAGCCAGCGACCGCAAAAAGACCAAGGAACAGATAGCGCACCTAAAGGCAAGCTTCCTGCAGAGCCAGTTCCCCGACGACGCTGAGGTCTACCGGCTCATCGAGGTGACCGGCCTCGCCAGGAGCGAGATCAAGAAGTGGTTCAGTGACCACCGGTACCGGTGTCAACGGGGCATCGTCCACATCACCAGCGAATCCCTCGCCAAAGACCAGCTGGCTCTCGCTGCCTCCCGCCACGGCCGCACATACCACGCATACCCAGACTTCGCCCCACAGAAGTTCAAAGAGAAAACCCAAGGTCAGGTGAAGATCCTGGAAGACAGCTTTCTGAAAAGCTCTTTCCCAACCCAAGCAGAACTGGACAGGCTGCGGGTGGAGACGAAGCTGAGCCGGAGAGAGATCGACTCCTGGTTCTCAGAGAGGCGCAAGCTTCGGGACAGCATGGAGCAGGCCGTCCTGGATTCCATGGGGTCCGGCAAGAAAGGGCCAGACGCGGCGGCCCCCAACGGTGCTCTGTCCAGACTTGACCAGCTCTCCAGTGCCCAGCTGGCCAGCTCTCTGCCCAGCCCCTCACCAGCGATTACAAAAAGTCAAGAACAGGTTCATCTCCTGAGAAGCACGTTTGCCCGAACCCAGTGGCCGACCCCGCAGGAGTATGACCAGCTGGCGGCCAAGACCGGCCTGGTGCGAACTGAAATCGTGCGCTGGTTCAAGGAGAACAGATGCTTGCTCAAAACTGGAACCTTGAAGTGGCTAGAGCAGTACCAGCCACAGCACGTGGTGGACGATCACGGCTATGACACCCCGTCGAGGAAAGTGGTCAAGACCGTCATCACCGAGAACCCGAAGAATGGGAGTGAGGGGGGTCATCAGTACTACAAGGACCCCAAAAAGCTCTGTGACGAGGACCTGGAGAAGCCGGGACCCAGAGGGAAGGCAGGTGGCGAGCAGGTGAAAGACAATTTGCCGGCAAAGCCCTCGGAGGCCACGTCGGACAGGTCGGAGGGCAACAGCCGGGACGGCCAGGCCAGCGACGAGAACGAGGAGTCGGGTGTCGTGGATTGGGTGGAGGTGACGGTTGGAGAGGAGGACGCTGCCTCCGACAGGTCAGACAGCTGGAGTCAGACGGCAGCGGAAGGCGCAGGGGAGCTGGCTGACTCGGACTCGGACAGCGGCCCGGCGGAGGCCAGCCAGGCCTAGACAGGGAAGTCCATCAGAACTGCCGTGCTGATGCAGGGAATAATCTGTCTTCAAAGAAAGAAGAGAACTTCTCTCCCCGGCTGAGGGCCGCCCTGGCCTGAGACTCCAAGTGGAACGACTTCGCTGCGTGTGCCTGCCGCTGCCTCTGCGCACACGCACCTCCCCGAGGCCCGGTGGGAACTGCTCCTAGTGCCAAAGTCCTACTACTGCGTTTTCCACGGGTCCCTGTAAATAGCTGGCTCCTGCGCCCAGGCCCCCACCTCTTGCTATACTGGAACCAATTTGTACAACATGGGAATTTTGTTACCTTTTTAACCGAGGGCAACTTCCTTTTCCAGCTCTACCATTGTAAGGTCTTTTTTCCAGGAGGGAGGGCTGATCACATGTGCTTTTCTTTTTTTTTCCTTTTTTATTTTTATTAATTTGGGGGAGGGGGGGTGTTAGCATTAGTGCCATTATATCTACTGGATTTTAGGTAGGGCGAGTTCGTTTTTAAAGATAGTTTGCAATTTGCGAGATTTCTTCCGGGGAAAAGGGCTGGGATTCAGGCCTCTGTCTGAGCTTGGAGAGGGGTTTACACATGACAGATCTTCCAAATCAAATCCATTTCTATAGTTCTTCCCCAGCTGCCTTTGGGGGTCCCTGTTTAGCCAGGCACAAGGCTTTCTGAACTGCCCCAGGCCAGTCTGGTTTTTTCTGATGGCCTGGCCTCTGAGGTCAGACCTTGGGCCAGGAGAGCTGGGTGGCAGGTGGCTACCCTCTGAGCCCCTTTTTAGAAACCAGCAGAAAGGGCTCACAAGTGCATTAGCATTATCATTAATTTTGTAAAAGTAAAACAAAAAGAGATTGTGCTATCTAGATGGTACAAAGATGAACAGCTTTGGTTTTCATTTCTGTTCCTAACTGCCTTTTCTCAGTGTGGTATTGGACAAGATTTCAGCTTGAAGCTTCACCACGAATTGATTTTTTGTTTGTTTTGTTTGTGTGTTTGTTTTGGGCCAATTTTAGATTCATGAGTGCACTTTTTTTTTCCTCAGTTAGTCCTAACTTCTAAAGAAGAAAAACCAAGAGACACATCCGGTGTAAATGTTGCAATATAAATTGTGTTTGCAGTCCCTTCCCCCCATCCCACTGCCCCCTATTTGAGTACACTGCACAAATAAAATGTTAGGGAGTTTAAAAAAAAACAATTTTTCTAACTTGTTGCTCATTTGTTGTAACTCAATAAAGCAAAGTCTAAACATTTTTATAACCTTT EMBV3_35749 GCACGTTGCAGTCCAAGTTTGTGCTGTTCGGAGCCACTCTCGTAGTCATCGGCTCCCACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11544 TGAACACAGCAGGGTTTTCTTCAACACAAGCTCCTAATCCAGTAGACGATGAGTCATGGG Gene GeneID:493725|DDX4:NM_001007819:9_cdna Constitutive 0 NULL GeneID:493725 20 GENE DDX4 VASA DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 EMBV3_27327 GTGTGAAGCTTCGAGCATTGACAGATTTCTTTAGGAGAAGAGACCACTTGCAACAAGGGG Gene GeneID:507139|GCA:XM_002685376:298_cdna UTR3_Alt 3 NULL GeneID:507139 2 GENE GCA NULL grancalcin, EF-hand calcium binding protein EMBV3_34033 GGAGAAAAAATGCCAGCTTAACCTCGGTGACAGTGAAAACAAGACCGCGCTGATGAAGGC Gene GeneID:615768|LOC615768:XM_002692108:334_cdna Constitutive 0 NULL GeneID:615768 13 GENE LOC615768 NULL similar to ankyrin repeat domain 26 EMBV3_07781 CTACTGTATGCCAGGGAGCAAGTGGCCTCTGCCTTGGTGGGGAAAAAGGCCCTTTAGCAA Gene GeneID:508130|MCAT:XM_002687960:62_cdna Constitutive 1 NULL GeneID:508130 5 GENE MCAT NULL malonyl CoA:ACP acyltransferase (mitochondrial) EMBV3_10588 GGGCCTTACAACGTGGCGGTGCCTTCAGATGTATCCCATGCCCGCTTTTATTTCCTGTTT Gene GeneID:615128|TMEM39A:NM_001076360:116_cdna Constitutive 0 NULL GeneID:615128 1 GENE TMEM39A MGC142633 transmembrane protein 39A EMBV3_40428 AGAGGCTCACGCTGTCCGGCATCTACCAGTACATTATAGCCAAGTTCCCGTTCTACGAGA Gene GeneID:281770|FOXL2:NM_001031750:6_cdna Constitutive 0 NULL GeneID:281770 1 GENE FOXL2 NULL forkhead box L2 EMBV3_43177 GGCTGAGACAGCAAACTGTGAAAAACCGGCTCAGCTTTCAGCTTCCAAAATTCCCAAGTC Gene GeneID:614796|MGC157372:NM_001099139:128_cdna Constitutive 0 NULL GeneID:614796 10 GENE MGC157372 NULL hypothetical LOC614796 EMBV3_36220 AACAAGTACAGCGCTCAGGGCGAGCGCCAGGATCTTAATTCATATCTTGAAGATAAAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38749 CCTGCCTCTCTCACGAGATCATCATCCGAAGCCACTGGACAGACGTCCAAGTGAAGGGGA Gene GeneID:100336815|LOC100336815:XM_002696138:276_cdna Constitutive 0 NULL GeneID:100336815 19 GENE LOC100336815 NULL hypothetical protein LOC100336815 EMBV3_09330 CTTTCCTTGTGGCACTTAGCGGCACCTCGGAGATGCTGGCCTTAGTAATTGGCCACTTTA Gene GeneID:504534|SLC10A3:NM_001075165:40_cdna Constitutive 0 NULL GeneID:504534 X GENE SLC10A3 NULL solute carrier family 10 (sodium/bile acid cotransporter family), member 3 EMBV3_13846 ACAGGACTGTGGGTCCTCTAATGTGTCCGGCTAAACCTAAGTGGCAAGTGTCCTCCATTC Gene BVV0102_268686 + 0 NULL GK000025.2:38887004-38903899 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22142 CAAGAGGGCAGCCAGGTTACAGCCTCCAACTTTCAGAAGTGGTGTCTCAGGAAGCACACT Gene BVT0102_068715 + 0 NULL GK000011.2:103607343-103668226 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32289 GGTATCAGCCTTTTATACCATCCTCACCCCGATGCTGAACCCTCTCATCTACAGTCTTCG Gene GeneID:539568|LOC539568:XM_002689118:78_cdna Constitutive 0 NULL GeneID:539568 7 GENE LOC539568 NULL similar to olfactory receptor, family 2, subfamily M, member 4 EMBV3_01158 AAGGGTGGCGGAAAAGGAGACGGTGAATAAGATGTCCCTGCACAACCTCGCCACGGTGTT Gene GeneID:789892|BCR:XM_002694695:294_cdna Constitutive 0 NULL GeneID:789892 17 GENE BCR NULL breakpoint cluster region EMBV3_16404 ACCAGCTACGACACCAGGAGTGGGCCCCAGGAGTCAAGACTGTGGAGTCGGCAACCGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41112 CCATTAGAAGTGGTTCAATGATGTAAGAGTCACACTGCTTCAACTTTTTCTTTGTTGTAG Gene GeneID:519708|YTHDF3:XM_002692694:106_cdna Constitutive 2 NULL GeneID:519708 14 GENE YTHDF3 NULL YTH domain family, member 3 EMBV3_03825 TTGTGACTGTATCATCTGGGACGGAATGAGCAGGAAATCCAGGAAGCGGCTTGAGCAGAA Gene BVV0102_317456 - 1 EMBV3_25763 GK000019.2:32426348-32695684 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22411 GAATTCTCGGCTGCAAAACGTGGAATCACAAATGGGAGAGAAATGATGGTGGGGGGTGGC Gene BVV0101_046828 + 0 NULL GK000007.2:22796783-22830095 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36962 CTTCATAGCTTATTTTTCTGCCTTTCAGCACTAAGTATCTACCATTCCTATCTCAGATCT Gene GeneID:508055|CNOT7:NM_001034312:16_cdna Constitutive 2 NULL GeneID:508055 27 GENE CNOT7 MGC128204 CCR4-NOT transcription complex, subunit 7 EMBV3_10296 GCCTGCGTGGCCAACACACTAGCTCCTCTGCATTACAAAGATATGATTATTCCTGAGCTC Gene GeneID:516537|LOC516537:XM_002691001:310_cdna Constitutive 0 NULL GeneID:516537 10 GENE LOC516537 NULL similar to peroxisomal long-chain acyl-coA thioesterase EMBV3_02280 GAGCTGATGGAGCAAGAGACTGAGGCTCAGGACATGGCCATGGAGCAGAACCTACAGAGA Variant GeneID:510660|HAUS5:NM_001101931:586_cdna 340^418 1 EMBV3_13764 GeneID:510660 18 GENE HAUS5 MGC139333 HAUS augmin-like complex, subunit 5 EMBV3_22999 CAATGGTTGCAGAGAGCAGCCTTCCCGGTAGTGTATGCCACCTGTTATCTGTTCAGGGAA Gene GeneID:100295560|LOC100295560:XM_002697791:380_cdna Constitutive 0 NULL GeneID:100295560 24 GENE LOC100295560 NULL similar to ribosomal protein 10 EMBV3_09521 GCTTCATGACGCCCCAGGGCTCCACGTGGTCCGCAACTGGGAAGAGAAAACAAAAATAAA Gene GeneID:407234|ADIPOR2:NM_001040499:7_cdna Constitutive 0 NULL GeneID:407234 5 GENE ADIPOR2 MGC134215 adiponectin receptor 2 EMBV3_19181 GAGCCAAGTGCGTGTGTGGAAAGAACCCTGCCAAGTACTACACCTTGTTCGGTCGTAGTT Gene GeneID:538357|LOC538357:XR_084591:286_cdna Constitutive 0 NULL GeneID:538357 16 PSEUDO LOC538357 NULL similar to glutamyl-prolyl tRNA synthetase EMBV3_09689 CCTCCATGCTAGACAGTCTTTGTGCTTCAAACACCCTTCCTTTTCTTTGGCTGGCCCAAT Gene BVV0102_426733 + 0 NULL GK000007.2:36269809-36648257 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06241 TCTGAGAATCGCCATCAAAGTCCTCGACTTCGCGTACAAACACAACCTGGCCTCCTACTA Gene GeneID:525813|ME3:NM_001075877:23_cdna Constitutive 1 NULL GeneID:525813 29 GENE ME3 MGC139844 malic enzyme 3, NADP(+)-dependent, mitochondrial EMBV3_26139 GAGCTCAGTCTGGGGCCTGTCCTAATGCCTTCCTCTCTCTCCATCTCCATATTCCTGTAA Gene GeneID:511010|PTPN3:XM_002689912:25_cdna UTR3_Alt 2 NULL GeneID:511010 8 GENE PTPN3 NULL protein tyrosine phosphatase, non-receptor type 3 EMBV3_27897 ACCTTCACTTCCTGTTGGATTTTAACACAGATCAGACACAGGCCCAAGGCACACTACATG Variant GeneID:521939|CCNA1:XM_002691801:440_cdna 687^811 1 EMBV3_43508 GeneID:521939 12 GENE CCNA1 NULL cyclin A1 EMBV3_09931 AGCTGCACACCCTGGACCTCAGGGACTATGGAGCTCAGGGAAACTGTGATCCTAAAGCAC Gene GeneID:534018|LEFTY2:XM_002693999:296_cdna Constitutive 0 NULL GeneID:534018 16 GENE LEFTY2 NULL left-right determination factor 2 EMBV3_02010 GGGCTGGAAAACTGTTAGACTACTTACAAGAAAACCCCAAAGGACTGGATACCCTGGTCG Gene GeneID:540824|BCL10:NM_001078028:83_cdna UTR3_Alt 2 NULL GeneID:540824 3 GENE BCL10 CARMEN CIPER B-cell CLL/lymphoma 10 EMBV3_30922 ACTCCATCTCAAGATACACGTGGCTTCATCGCTGGTGTTTCCCAAAGCCAGTAGTCAGTG Gene GeneID:514244|LOC514244:XM_002691050:453_cdna UTR3_Alt 2 NULL GeneID:514244 10 GENE LOC514244 NULL similar to rCG20598 EMBV3_33318 TTCTCCAGTTGTGAAGAGGAAGTCCATTGTAGTGGGAGAAAAGGCCAGCCCCCAGAGGAA Gene BVV0102_381010 + 1 EMBV3_37594 GK000028.2:298077-368839 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35042 GCCTGGGAATGCCATTACTGTGTAATGAGGCATGCAGCAAAATATACCTTCAGCAGCCAC Gene BVT0102_233268 + 1 EMBV3_04755 GK000018.2:41414919-41990974 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35141 AAATAGTGCACAGCCATGCGTGTCCCAGCCTCTAAGTACCAAAACCAAGCCAGAGGCCTT Gene BVT0102_022865 + 0 NULL GK000019.2:37193943-37215045 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096649 TCONS_00096648 TCONS_00096650 1 XLOC_058022 Coding TCONS_00096649 XLOC_058022 Coding Coding ITGA3 19:37198628-37231287 = TSS71765 4758 1 TCONS_00096649_7 1065 25 0.855073795088493 0.000571122133240407 0.000555404315897172 0.00017913736704528 0.000269412355464852 2.79818133167147e-08 3.75256708200562e-05 3.24502821878858e-08 6.47413796276882e-05 0.000274410340247916 2.34875909825485e-08 1.28537120398969e-08 4.21264830129738e-05 1.86903951318046e-05 2.62340288205478e-08 0.000421195666690091 0.00123572098427123 9.06491920106809e-08 0.000163441806496568 4.05149198870969e-08 0.000202709780394553 1.69332869076408e-08 8.30227393157412e-05 4.9841998216553e-08 0.000411765747510771 0.000725113531359582 1.41043323748127e-07 3.28830211488795e-08 0 2.74550001060194e-08 9.30271576012295e-06 XM_003583574.2 ITGA3 PREDICTED: Bos taurus integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) (ITGA3), transcript variant X1, mRNA. 0.0 8581 100.00 0.99978982765868 NM_005501.2 ITGA3 Homo sapiens integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) (ITGA3), transcript variant b, mRNA. 0.0 5061 83.86 0.998528793610761 TCONS_00096649_7 sp|F1MMS9|ITA3_BOVIN ITA3_BOVIN Integrin alpha-3; 0.0 2061 98.27 0.978403755868545 4 coding CGAACCCGGATCGGAGGCGACTGTGTGGCCAAGTGGGCGCGGCCGGCGCGAGCTGAGGGGCAGGGTGCCCCGGGCAGGGGGGAGGTGACCCGGGACAGTGCAGGCGGGAGAATAGACCCGCGGACCTCCGAGGGGAATCTGAGCGTTCAGACCGTGAGCGGATGTAAAATTGACCAAGTCTGAGGGCCAGAAACTGATCAGTGCTGCGGGGCTTAACTACGCGGCCGGCGGGAGCGTTCTTCGGTGGCGCGGGGGAGCAGGTGAACAGGTCCTCACTCCCAGCTCCACGCCCTCACGCGCTCTCGCCAGGAGCCAGGTTCCCGCCGGCAGCCATGGGCCCCGGCCCCAGCCGTGCCGCCGGCGTCCTACGCCCGTTGCTCGGCATGCTCGCCTTGATGGTGGCCGCAAGCAACCGCGCCGCCTCCGCCTTCAACCTGGACACCCGATTCCTGGTGGTGAAGGAGGCCGGGAACCCGGGCAGCCTCTTCGGTTACTCGGTCGCCCTCCATCGGCAGACAGAGCGACAGCAGCGCTACCTGCTCCTGGCTGGCGCCCCCCGGGACCTCGCTGTGCCTGATGGCTATACCAACCGGACTGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGAATGACTGTGAGCGGATGGACATCAAGGAGAAAAGTAACCCTAACCACATCATTGAGGACATGTGGCTCGGCGTGACTGTGGCCAGCCAGGGTCCTGCAGGCAGAGTCCTGGTCTGTGCCCACCGCTACACCCAGGTGCTGTGGTCCGGGTCAGAGGACCAGCGGCGCATGGTGGGCAAGTGCTATGTGAGAGGCAACGACCTGGAGCTGGACGCCAGGGATGACTGGCAGACCTACCACAACGAGATGTGCAACAGCAACACTGACTACCTGGAGACAGGCATGTGCCAGCTGGGCACCAGCGGCGGCTTCACCCAAAACACCGTGTACTTTGGCGCTCCTGGTGCCTACAACTGGAAAGGAAACAGCTACATGATTCAGCGGAAGGACTGGGATTTGTCTGAATATAGTTACAAGGACCCAGAGGACCAAGGAAACCTCTATATTGGCTACACGATGCAGGTGGGCAGTGCCATCTTGCACCCCACAAACATCACCATTGTGACAGGTGCCCCGCGGCACCAACATGTGGGCGCTGTCTTTTTGCTGAGCCAGGAAGCAGGTGGAGACTTGCGGAGGAGGCAGGTGCTGGAGGGCACGCAGGTGGGAGCCTATTTTGGCAGTGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACCTCCTGGTGGGTGCCCCCTATTACTTTGAGCGGAAAGAGGAAGTAGGGGGTGCGATTTATATCTTCATGAACCAGGCAGGCACCTCCTTCCCAGACCACCCCTCCCTCCTTCTTCATGGCCCCAGTCGCTCCGCCTTCGGCTTCTCTGTGGCAAGCATTGGTGACGTCAACCAAGACGGATTCCAGGACATTGCTGTGGGAGCCCCATTCGAGGGCTTGGGCAAAGTGTACATCTACCATGGCAGCTCCAGGGGGCTCCTCAGACAGCCCCAGCAGGTAATCCATGGAGAGCAGCTGGGACTGCCTGGCTTGGCCACCTTTGGCTACTCCCTGAGTGGGCAGATGGACGTGGATGAGAACTTCTACCCAGACCTGCTGGTGGGGAGCCTGTCAGACCGCATCGTGCTGCTGAGGGCCCGGCCTGTCATCAACATCCTCCATAAGACCTTGGTAGCCAAGCCATCCATACTGGACCCTGCATTCTGCACGGCCACCTCCTGTGTGCAGGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCAGGCAACCCCAACTACAGGCGGAACATCACCCTGGCCTACACGCTGGAGGCTGACCGGGACCGCCGCCCACCCCGACTCCACTTTGCACGCAGCCAGTCAGCTGTCTTCCACGGCTTCTTCTCCATGCCTGAGATGCGCTGCCAGACACTGGAGCTGCTCCTGATGGACAACGTCCGCGACAAACTCCGACCCATCACCATCTCCATGAACTACTCGTTACCTTTGCGGTTGCCTGATCGTCCCCAACTGGGGCTTGGGTCCCTGGATGCCTACCCGGTCCTCAACCAAGCGCAGGCTCTGGAGAACCACACGGAGGTACAGTTCCAGAAGGAATGCGGGCAGGACAACAGGTGCGACAGCAATTTACAGATGCGGGCGGCCTTCGTGTCTGAGCTGGGGCAGCGGCTGAGCAGGCTCCAGTACAGGAGAGACCTCCGAAAACTGCTCCTGAGCATCAACGTGACCAACACCCCAAGCCGGAAGCGGGCTGGGGAAGATGCCCACGAGGCGCTCCTCACCCTGGAAGTGCCTCCCACCCTGCTGCTGTCCTCAGTGCGCCCCCCTGGAGCCTGCCAAGCCAATGAGACCATCGTTTGTGAGCTGGGGAACCCCTTTAAACGGAACCAGAGGATGGAGCTGCTCATTGCTTTCGAGGTCATTGGAGTGACCCTACACACAAGGGAACTCCAGGCGCAGCTGCAGCTCTCCACGTCAAGTCACCAGGATGACCTACGGCCCATGACCCTGCCTCTGCTGGTGGACTACACACTCCAGGCCTCACTCAGCATGGTGAATCACCGGCTACAAAGCTTCTTTGGGGGGACAGTGATGGGTGAGTCTGGCATGAAAACTGTGGAGGATGTGGGAAGCCCTCTCAAGTACGAGTTCCAGGTGGGCCCAATGGGTGAAGGGCTGGCAGCCCTGGGGACCCTGGTCCTGGGGCTGGAGTGGCCCTATGAAGTCAGCAATGGCAAGTGGCTGCTGTACCCCACGGAGATCACTGTCCATGGCAATGGATCCTGGCACTGCCAGCCGCCTGGAGACCTTATCAACCCTCTCAATCTCACTCTCTCTGTTCCTGGGGACGGGCCGCCATCTCCACAGCGCAGGCGGCGACAACTGGACCCAGGAGGAGGCCAAGGCCCCCCGCCTGTCACTCTGGCTGCTGCCAAAAAGGCCAAGTCTGAGATCCAATTGAGCTGTGGCAGTGACCACACCCACTGTGTGTGGCTGGAGTGCCCCATTCCTGATGCCCCTGTCATCACCAACGTGACCATCCAGGCACGAGTGTGGAACAGCACCTTCATCGAGGATTACAGAGACTTTGACCGAGTCAGGGTAGCCAGCTGGGCCACCCTGTTCCTCCGAACCGGCGTCCCCACCATCAACATGGAGAATAAGACAGTCCGGTTTTCCGTGGACATTGACTCTGACTTGGTGGAGGAGCTGCCGGCTGAGATTGAGCTGTGGCTGGTGCTTGTGGCTGTGAGTGCCGGGCTGCTGCTGCTGGGGCTGATCATCCTCTTGCTGTGGAAGTGTGACTTCTTTAAGCGGACCCACTATTACCGGATCATGCCCAAGTACCACGCGGTGAGGATCCGGGAGGAGGAGCGCTACCCACCTCCAGGGAGCACCCTGCCCACCAAGAAGCACTGGGTGACCAGCTGGCAGACTCGGGGCCAGTACTACTGACATCCTCCCTGATCACACCCTGCTCCCCCAGCGTCCCCTTCTACTATTTATCATAAGTTATGCCCCGCCAGACCACAGGGGACGCTGCCTTTGGCTGGCACCAGCAGGCTCGGGCACACACACCTTTCAAGTGCACGCACGTGCTATGTGGCCATGGCCTCCTCCCTGAGGGAAGGCTGGGGCCGTGGCCCGTGCATTGCTGAGCACTGCAGCCCTGTGCCCTGGACACACATGAGCGCGTGGGGGTCCAACTGCTGTGGACTGTGCTTGCGCACCCAAATAGTGCACGGCCATGCGTGTCCCAGCCTCTAAGTGCCAAAACCAAGCCAGAGGCCTTCTGCCAGAGCCAGGAGGAAGAGGCCCCCAATGCGGGGACCCTTCCTGTATTCACACTGGACCCATCATGAGCCATAGGCACTGGATTGACCCTGACCTCGAGATGAAAACTACCTACAAGGAGCAGCCCACAGACCCCCAGTGCAACTCTCAGCACCCCTGGCAGAGAGTGGGGAGCCTGCCTGAGGTCGCTCAAGGAGGTGTTCATAGGACCTGGCGTGCTCAGACCAAGAGCGGAATGAACTAGAAAAAAGGTCCCCAGGGGGGCTTTCTTTCACGAATTGCTGGGAAAACCTCTGAACTCAGCCATGGCCATTCCGCGCACTAGTAGGAAATGCAGCCTGAGGAAACAGAGATGGACATGCTGCTAGGCAGCCAGGACATGCTGTGCTGGGACCACTCTGGGAGCATAATGGAATTCTCAACAGAGTGGGGACCGGTCCTGGGCCAAGGAGATGATGGACGGATACAGAGCAGATACCACTTCTCACCCACATCACCATCCTGACCTTGAAGGCCTGGAGGGATCTCCACGCGATCACAGAGGGAGCGACACCTGAATGTACAACAGGAAGGAAGCCCCATCATGCCCCGTCGGCCAGACCCCACTCTGCCCTCACTGACCATGGGTTGGAGACCTAGAAGTGGAGCTCTTGGCTCTCTTTGGCTTTTGGAGCCAGTTTAGCTTTGCCTTCTCACCTGTGGCCCATTCTAGAAGTTGAGCTATTTCCAGAAAAACCTCTCCTGACCCCGGGCTGTTGGCAGGTCCCCTCCTCACCCCCTCCCCCCTTTCATGGTACTGTAGCAGGGGAGCTCCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACAGCAACCAGTAAACAGCCCCCTGTTTGTACACACT EMBV3_11764 CAGGCTGCAATGACTGTGAGAAAAGTCTCTAAACAAAAAGGTGTCAACTCTGCCCGCTCA Gene GeneID:537718|ARHGEF9:NM_001035418:118_cdna Constitutive 0 NULL GeneID:537718 X GENE ARHGEF9 NULL Cdc42 guanine nucleotide exchange factor (GEF) 9 EMBV3_09918 GGTCAAAAAGTGCCTCAGTTCCATGGCAAGGTCTCCCTCAATGCTTGGTTCTGGTCCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07463 TGTTTCCTTTTGGGACCTGAACTACGGGGACCTGTTACAGACAGTCTACCTGGGCAAGAA Gene GeneID:507878|SCAP:NM_001101889:100_cdna Constitutive 0 NULL GeneID:507878 22 GENE SCAP MGC157202 SREBF chaperone EMBV3_31407 GCAAATACACTATAATAGATCCATATTACTGGAATCTATCAACCTTGAGGGATAGCTTTC Gene GeneID:504592|MAP3K2:XM_002685232:161_cdna Constitutive 0 NULL GeneID:504592 2 GENE MAP3K2 NULL mitogen-activated protein kinase kinase kinase 2 EMBV3_11797 CAAGCTTTTAACACATTTTTAACCTAGGAGCTCTGTTGCTGGAAGTGTGAGTCCCCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27336 TGTTCCATCCACATACTACAAACAACTGCGGGAGAAGCTCAAGATGGCCAAGATCCGGGT Gene GeneID:516058|HPD:NM_001015611:171_cdna Constitutive 0 NULL GeneID:516058 17 GENE HPD MGC128788 4-hydroxyphenylpyruvate dioxygenase EMBV3_22804 AGAGACCGCCTTCTTAGATCCCGTAGTGCCTGAGCAGCAGAGTTAGTGGAAGGTGCCTCC Gene GeneID:616798|LOC616798:XR_084031:529_cdna Constitutive 0 NULL GeneID:616798 22 PSEUDO LOC616798 NULL similar to plexin B1 EMBV3_05882 AGGGATCCTTCCTGGCCTCCTTGGTTAGGAACAACTTGAATACCCAATCAGATGTCTGGA Gene GeneID:513652|REG3G:NM_001024534:71_cdna Constitutive 1 NULL GeneID:513652 11 GENE REG3G REG3A regenerating islet-derived 3 gamma EMBV3_13162 CGAGCTCCTGCTGACCAACAACAGCCTGCAGAGCGTGCCCCCCGGCGCCTTCGACCACCT Gene GeneID:617668|GP9:XM_002697149:82_cdna Constitutive 0 NULL GeneID:617668 22 GENE GP9 NULL glycoprotein IX (platelet) EMBV3_30058 GGAGGGAGGTTTGACGTTGCTGAAGACATAATTTATACCAAATTATGCCAGGTGGGGAGG Gene GeneID:788007|FLRT1:XM_002699324:163_cdna Constitutive 0 NULL GeneID:788007 29 GENE FLRT1 NULL fibronectin leucine rich transmembrane protein 1 EMBV3_04208 CGTGTCCTACTTCATCACCAGCCTGAGCTACGCCAACAGCTGCCTCAACCCTTTCCTCTA Gene GeneID:281207|NPBWR1:NM_174074:8_cdna Constitutive 0 NULL GeneID:281207 14 GENE NPBWR1 GPR7 neuropeptides B/W receptor 1 EMBV3_35212 TGGTCCTCTGGCAGAAGTCTGTTCATAGTCTCATAACCTGCATTCCATACCAATAGTAGG Gene GeneID:510136|ZNF295:NM_001083659:12_cdna UTR3_Alt 2 NULL GeneID:510136 1 GENE ZNF295 NULL zinc finger protein 295 EMBV3_24398 CGCCACTCAGATGCTGTCTTCACTGACAACTACACACGCCTTCGAAAACAAATGGCTGTG Gene GeneID:280956|VIP:NM_173970:2_cdna UTR3_Alt 2 NULL GeneID:280956 9 GENE VIP MGC143128 vasoactive intestinal peptide EMBV3_43200 CCACACTCACGACACATCTCACTGACACTCTGATCATTACAGGACCCCCATGACATACTG Gene BVT0102_062849 + 0 NULL GK000009.2:45522650-45530713 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237311 1 XLOC_144681 NonCoding TCONS_00237311 XLOC_144681 NonCoding NonCoding BVES 9:45516954-45525941 x TSS177435 844 2 TCONS_00237311_1 50 0.604265402843602 2 0.906298686846205 0 2.38114571521279e-05 0.000173581179200529 0 5.26438347812202e-05 0 6.90960369498829e-06 0.000128197344392888 1.06612663255351e-05 0 0 2.54194710500452e-05 0 0 0.000337155676739113 0 0 0 6.38651329342391e-06 0 0 0 1.37660618253172e-87 0 9.85091766615824e-05 7.02512135837944e-05 1.68278182989835e-05 0 0 0 XM_590718.4 BVES PREDICTED: Bos taurus blood vessel epicardial substance (BVES), 6e-123 444 99.60 0.293838862559242 NM_147147.3 BVES Homo sapiens blood vessel epicardial substance (BVES), transcript 4e-18 96.9 63.77 0.631516587677725 0 noncoding 0 0 0 0 -0.208318346986148 0.103556186754183 0.0153683004659137 0.810492260935615 TAAAGTGGGTTTCTTAAACTTCCCCTACAGTATGTCATGGGGGTCCTGTAATGATCAGAGTGTCAGTGAGATGTGTCGTGAGTGTGGAACAAACTTGAGTTCCCCGCACAGTCCTATCCCTTCACATGGAGAATTGGAATTAAGTGGATGGGAATTTCTAATCACTCTAGTTGGGCATAATTAGAAAAAGGTTGTGAAACCAGGTTAGGGAAAAGGGAAGGGAGGGGAAACATGGCAGAGTCAACGGTTTCTGCAGAGCAGCTTTACAAATGACCAGGAAAATGGATTTAAAAACAGTAACAGTGAATCCTTGGAGCTGCACCCCAGGGTCTGGACCAACCAGCATGCCCAAGGGCTCGGCTGGGTGCCACGCACACTAGCATTACATCCTCACCAGAGGGCAAGGTCGTCACCTGGGTGCCCCACGGGCAGAGCTAAGTGTACAGTTACATAACTTTCCCTACTAAATATTTTTTCTAGCATCTAAGTGACTCTGCCTTTGAGGCCACGATAGGACCTGGGAAGCAAGAATCGGCAGCTCCAAGTTACAAAATCAGAAAAGCTTCAGGTGTGTGGAAGGAGAACCAGATGCGACGAAGGTGGTGTCTCCCGGTGGGCACAGCACACTGTTGGCAGCAAAGCACAAAGCTACAAAATGACTAAAGTGAAGTGAACCACAGGGAGACACAGAAAAGATCCCAGGAGGCCAAGGAGGTTACAGCAGACATACCAAACATAACCTGGAATTTGCATGTGAATTATTCAAATGGCAATGTAACCTATCTGTGTGACCTTGGGCAGGTTACTTCACTTCTCTGTGCCCCAATTTCTCTATCTGTAAAAT TCONS_00235405 TCONS_00235403 TCONS_00235404 r 5' 5441 TCONS_00235405 r 5' 0 EMBV3_13581 TTATGTGACCCGATAGTGTTCCCCTAACCCCTCAAAATCGGTAAAGAAAGATTCATGGCA Gene GeneID:281733|CXADR:NM_174298:23_cdna Constitutive 0 NULL GeneID:281733 1 GENE CXADR NULL coxsackie virus and adenovirus receptor EMBV3_32390 CAGACAGAAGTAGGCGGAAGGGCCTGTCTAGGTCAGGAATATATACACCCTGGAGAGCTA Gene BVT0102_121677 + 0 NULL GK000003.2:14774063-14790299 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168566 TCONS_00168567 TCONS_00168568 1 XLOC_103137 Coding TCONS_00168568 XLOC_103137 Coding Coding UBQLN4 3:14767949-14783523 j TSS126397 3676 1 TCONS_00168568_3 601 0.0720892274211099 11 0.764656777756373 0.000362709597315521 0.000623236184711796 0.00137303587788215 0.000532051730565719 2.09926551261264e-05 7.4212810538703e-05 6.54573702217984e-05 7.34577750811043e-05 0.000673880723199076 1.79083334758385e-05 5.76284598306498e-06 0.000206699586178331 1.43226784582567e-05 2.34036322622377e-05 1.25318441087488e-10 0.00340996876209536 0.00145732299849184 0.00147298710864025 0.000208727064446907 0.000459054009975068 6.99847977851487e-05 0.000819207951474887 0.0005040003461766 0.00155009150403422 0.000229313490936812 0.000478217721674566 0.000228140972317405 0.00026766814360517 0.000303862764178168 0.000478262581481504 NM_001080295.1 UBQLN4 Bos taurus ubiquilin 4 (UBQLN4), mRNA. 0.0 1645 99.89 0.248639825897715 NM_020131.3 UBQLN4 Homo sapiens ubiquilin 4 (UBQLN4), mRNA. 0.0 3119 88.25 0.66974972796518 TCONS_00168568_3 sp|Q9NRR5|UBQL4_HUMAN UBQL4_HUMAN Ubiquilin-4; 0.0 964 96.17 0.998336106489185 3 coding 0 0 0 1 -0.00724252810425774 0.956348359474187 -0.0219286703326706 0.927760948155761 GGTGGCGGCGGTGGCATGGCGGAGCCGAGCGGGGCCGAGACGAGGCCCCCCATTCGGGTCACCGTCAAGACCCCCAAGGACAAGGAGGAAATTGTGATCTGCGACCGAGCCTCGGTCAAAGAGTTTAAAGAGGAAATCTCCCGGAGATTTAAGGCACAGCAGGATCAGCTGGTCCTGATCTTCGCAGGCAAGATCCTCAAGGATGGGGACACACTGAACCAGCATGGGATCAAGGATGGGCTCACTGTTCATCTGGTCATCAAGACCCCTCAGAAGGTTCAAGATCCAGCTACTGCCACTGCTTCTTCCCCTTCCACCCCAGACCCAGCCTCAGCCCCCTCCACCACCCCTGCTTCACCTGCCACGTCTGCCCAGCCCTCCACTTCTGGAAGTGCCACTTCAGATACAGGCAGTGGAAGCCGAAGGGGCAGTGGAGGGGGTACCTCCCCAGGGACTGGGGAGGGACCTCCCAGTGCCACTGCATCCATACTCTCTGGCTTTGGGGGCATCCTGGGCTTGGGCAGCCTGGGCTTGGGCTCTGCCAACTTCATGGAGCTGCAGCAGCAGATGCAGAGGCAGCTGATGTCCAATCCTGAGATGCTGTCGCAGATCATGGAGAACCCCCTGGTCCAGGACATGATGTCTAACCCCGACCTGATGCGCCACATGATCATGGCCAACCCCCAGATGCAGCAGCTGATGGAGCGGAACCCTGAGATCAGTCACATGCTCAACAACCCTGAGCTTATGAGGCAGACAATGGAGCTTGCTCGAAATCCAGCCATGATGCAGGAGATGATGCGGAACCAGGACCGAGCTCTAAGCAACCTGGAGAGCATCCCTGGAGGGTACAATGCCCTCCGCCGCATGTACACAGACATCCAGGAGCCCATGTTCAGTGCTGCCAGGGAGCAGTTTGGCAACAACCCCTTCTCTTCCCTGGCCGGGAACTCCGACAGCTCATCCTCCCAGCCTCTGCGGACTGAGAATCGAGAGCCCCTCCCTAACCCCTGGAGCCCCTCGCCCCCCGCCTCCCAGGCCCCCGGGTCCGGTGGGGAGGGCGCCGGAGGATCAGGGGCCAGCCGGGTGCACCCAACGGTCTCCAATCCCTTTGGGATCAATGCGGCTAGCCTGGGGTCAGGGATGTTCAACAGCCCAGAAATGCAGGCCCTCCTCCAGCAGATCTCTGAGAACCCCCAGCTGATGCAGAACGTTATCTCAGCCCCCTACATGCGCAGCATGATGCAAACGCTTGCCCAGAACCCCGACTTTGCTGCTCAGATGATGGTGAACGTGCCGCTCTTTGCGGGGAACCCCCAGCTGCAGGAGCAGCTCCGCCTGCAGCTCCCAGTCTTCCTGCAGCAGATGCAGAACCCAGAGTCACTCTCCATTCTCACCAATCCCCGAGCCATGCAGGCGCTGCTGCAGATCCAGCAGGGACTGCAGACCTTGCAGACCGAAGCCCCAGGGCTGGTACCCAGCCTTGGCTCTTTTGGGATGGCCCGGCCCCCAGCATCCTCTGCAGGCAGCAACGCCGGGTCTGCGCCCGAGGCGCCCACCTCCTCGCCAGCCCTCCCAGTCACGTCATCTCCAGCAGGGGCCTCCAGCGCTCAGCAGCAGCTCATGCAACAGATGATCCAGCTTCTGGCTGGAAGCGGAAGTTCACAGGTGCAGACGCCAGAAGTGAGATTTCAGCAGCAGCTGGAGCAGCTCAACTCCATGGGCTTCATCAATCATGAGGCCAACCTGCAGGCTCTCATCGCCACGGGAGGGGACATCAACGCAGCTATCGAGAGGCTCCTGGGCTCTCAGCTCTCCTAACCCCTCAGCCCGGGCCTCTTGCGTCTCCCCTCCCTTGATGCCCATGTTTGGCTCCTCTGTCAGCCTGGCCCTCTGCAGCTTGTCATCCCTTCTGCTCTTCTCCCTTGTTCTCTCCAGACAGCAGGGTGACTTTAGAGGGGTGGGCCCAGCCCTGCGGCTCTGAGAATTCCACTTTTACTTCACCTCTTGTAGAACCTTCTCTCCTGGTCCTGCCTGCTTGAGCAGAGCTATTTAAACAGTTTTCAGTTTTTGCTGATCGGCCCCACCTCCTTACTCCACAACCATCTTTTGCAGCCTTCACACTTCTCAGTGGCAGTGCAGAGTTGAAGGAGGAACCCACTGTCTGCTTTATTAGAACAGGGTCTTCTGTCTCTACCACTAGGATTTTTCTTGTCTTATGATTACTTTTGGTAACTCTTCCTCCTCTCTTTCCCCTCATCCCCTCCCACCTCCAGCCTACCCAGCGCTAGACTTCCATCCTCTGAAGGAGGGGCAGGTGAAGCAGGCTGTGATTTTCCTCCTCACCCCATGTTCTGATCACTTTCAGGGGGTCTGTTGGGATTCCCAGTGGAAGGAAGATGCTTGTTCCCCCTGTCTGAAGGGAGACATGAGACGCGGCCCCCCTGGAGCAGGAGTTAACAAGCCCCGAAGTGAAGTTCCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTACCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATCAAACCCGGGTCTCCCGCATTGCAGGCAGACGCTTTAACCTAAGCCCTGGACCAGCCCAATAAGGGGATGAGGGAATGAGACTTTCTGGAGGAAGGGAATGGGGGAAACAGCGTGAGCAGAGGACTTGGAAGTTGGAATTGACAGGGAATGGAAACACTAATAGTTCTTTTAGTCCACAGAGTCTAGGCTTTGGCCTGGCAAAGGAGATTTAGAGATGGTAATGAAATTTGAGTTGAAGAAAAGGGTTCAGAGAAGCTAAACAGTATGGCTCACAAGGGATTATATTGGCTCCATTTCCTCAAACACACATGCTTCTGTACATTCACACACATTTCCATGAACCCAGGACCTGCCCGCATCTCCAGGTACCAGTGATTTAAGCCCCGCTCAGAAGACATGAAGAGGACTGGGGTCTGTCTCAGCAGTGAGGGTGTGTGTGGGTGGGTGGGTGCATGCACGCACGCGCACATGTGCATGTGAGTTGAGTGGGAGGGTGGATACCTTATTGATTTCTGGTTTAGAGTTTTATCCCACCAGACAGAAGTAGGCGGAAGGGCCTGTCTAGGTCAGGAATATATACACCCTGGAGAGCTAGGTCCCCTAGGCCTCTGGATGCCTGGGTAGTGTGGGGACCCCTTCTGAAGCTGTCAGGGCTGTGACTGGCACCCTTGATTACCCCTTCTCTTATTGCTTTTGGGGAATAGTGGGGGAGGAGTCTTTCTAGAACCCCTGGCCGCTCCTGCCCTTGAGTTTTCACTGTTTCCCTCCAGGCCAGAAAGTTCTATTTGAGGAAGGGAAGGAGAGGGCAGCAATGATGCCTTTGATCTGGAATTGGACTTTACTCTAGTGGAGCATAGGGGAGGCTCAGATCACCTCCTCTCTCTGCTACTTAGCCCAGCTGCTTGGAGGACCCGTTACGGAGGCAAGAGGAACTGAATTTTCTCCCAAGTGGGAAAGGGTCCCAAGCAATCCAGAGAGGATGTCTGTGTGGCTTTCCCTCCCTACCTCCCCCAACTCCTACACTGGCCTTTGTAAATAAATGATATGGTCTTTGTTGTGAG EMBV3_39787 GTCAAGGACCTGAAGCTGACTACAGATGAGGAAAAGCAAAACCTGGTATTATCCCTCTGG Gene GeneID:540466|MINA:NM_001015675:99_cdna Constitutive 0 NULL GeneID:540466 1 GENE MINA MGC134198 MYC induced nuclear antigen EMBV3_25362 GCATTCTTGATGGGAAAGTTAAAGTGAAGGTGTTCAGTCGTGTCCAACTGTTTGCGACCC Gene GeneID:280753|CPE:NM_173903:16_cdna Constitutive 0 NULL GeneID:280753 17 GENE CPE NULL carboxypeptidase E EMBV3_09440 TTTCTGGGCAACCCCAGTTCCTCACTTCCAACCTGCCTGTTCCTTCCCACATACTTATCC Gene GeneID:783873|HOXB9:XM_002695909:257_cdna Constitutive 0 NULL GeneID:783873 19 GENE HOXB9 NULL homeobox B9 EMBV3_25472 CAGCTGGTGGAGGCGACAGACGAGAATCAGGTATTAGCAAGACACCTACAAAAAGAGGCC Gene GeneID:787357|LOC787357:XM_002684856:231_cdna Constitutive 0 NULL GeneID:787357 1 GENE LOC787357 NULL similar to axin interaction partner and dorsalization antagonist EMBV3_08383 TGGTAAGGGTGTCGCCCTCTTTGTACAGAAGGATGACTAATTTACAGGAGACTTCCTGTG Gene GeneID:615438|BTBD19:NM_001101241:304_cdna Constitutive 0 NULL GeneID:615438 3 GENE BTBD19 NULL BTB (POZ) domain containing 19 EMBV3_31631 GGTGATCTACAAAGACATTATGTTCTCCTACGTGTCAGTGGGGGAGATTTGCCAACATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29812 ATGATGCTGACTCCTGCTAACCTCACCACCAACCCATCCCAAGAATGTCCAGGAGCTGAT Gene BVT0101_019506 + 1 EMBV3_31132 GK000025.2:26649702-26661749 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00148816 1 XLOC_090696 NonCoding TCONS_00148816 XLOC_090696 NonCoding NonCoding - 25:26655022-26655469 - TSS111351 447 2 TCONS_00148816_2 50 0.977628635346756 1 0 0 0 0 0 0 0 0 1.32320360323895e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000205235941901715 0.000112514405689668 0 0 0 0 0 0 XM_002688782.3 ZNF627 PREDICTED: Bos taurus zinc finger protein 627 (ZNF627), mRNA. 4e-40 168 78.06 0.512304250559284 0 noncoding 0 0 0 0 -0.0414134800523408 0.724642162607463 0.0507531390475679 0.422932514700688 GATCAGCTCCTGGACATTCTTGGGATGGGTTGGTGGTGAGGTTAGCAGGAGTCAGCATCATCACCCTTCAGGTGCAACTGGTCTGGGGTCTACACACTTGTGGGCCGCATACCATTGTTAATTGCTCTTTACTTCTTCCTCCTGGAGGGGGTTTCAGTATCTGCAAAATAGCTTAAAGATATTGTTTGTATCTGTCGATGGGGCAACAGGAGCCTACCCCAAGGCTGCTCTCTCTTTTTTAATGCAATTTTATGTATCTGTTTTTGGCTGTGCTGGGTCTTTGTTGCTGCACTGGCATTTCTCCAGTTGCAGCGAGCAGGGGCTACTCTCTAGCTGCGTGCGTGGGCTTCTCATTGCCTTGGCTCCTCCTGTGGGCCATGGGCTCTAGAGCACAGGCTCAGTAGTTGTGGCGCACGGGATTAGTTGCTCCGAGGCATGTGGCATCCT TCONS_00144884 TCONS_00144885 TCONS_00144887 TCONS_00144883 . 3' 4387 TCONS_00144884 TCONS_00144885 TCONS_00144887 TCONS_00144883 . 3' 4833 EMBV3_34299 CCCAAGCGGCTGTCACTGCTTTTTGGATGGGGATGGGAAATGGAACTTTTATGGCCCCTC Gene BVT0102_017807 - 0 NULL GK000026.2:22854923-22891397 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150518 TCONS_00150507 TCONS_00150524 TCONS_00150513 TCONS_00150519 TCONS_00150509 TCONS_00150512 TCONS_00150517 TCONS_00150527 TCONS_00150510 TCONS_00150516 TCONS_00150514 TCONS_00150511 TCONS_00150508 TCONS_00150523 TCONS_00150525 1 XLOC_091892 Coding TCONS_00150527 XLOC_091892 Coding Coding - 26:22874501-22884910 - TSS112725 3128 1 TCONS_00150527_6 752 17 0.701095311299001 1.68568192974902e-06 0.00173886819192133 0.000384771907174414 0.00347119544869508 0.000881631828057342 0.000363128031914076 5.88023225260008e-16 0.00040030575227683 3.17363529522372e-68 0.00162605669326211 5.97706370184225e-22 2.71574302924272e-12 1.83021842536436e-77 0.00114926779300222 2.24751326484693e-07 0.00255105640656946 0.00132357664228128 0.00483591576034021 0.00533296561245987 0.00732161214024629 0.00130832592239004 0.00230245684185626 0.00216303627710067 0.00141451603957917 0.00329281380387288 8.24127007154166e-08 0.00300313927844465 0.000538182441735797 0.000161725868756513 9.3711248116661e-05 NM_001199378.1 GBF1 Homo sapiens golgi brefeldin A resistant guanine nucleotide exchange factor 1 (GBF1), transcript variant 2, mRNA. 0.0 3793 87.81 0.958120204603581 TCONS_00150527_6 sp|Q92538|GBF1_HUMAN GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1; 0.0 1354 95.11 0.998670212765957 0 coding 0 0 1 1 -0.0880197467849753 0.485889403948112 -0.1279594392656 0.0491118383223506 GGGTAGAAGACTTTGTGGATCCCAATGGCAAGATCTGTCTACAGCGGGAAGAGACACCATCAAACCGAGGAGAGTCAACAGTGCTGAGCTTTGTGAGCTGGCTGACACTAAGTGGTACTGAGCAGTCGAGTGTGCGGGGCCCATCCACTGAAAACCAAGAGGCCAAGAGAATGGCTTTGGACTGTATCAAGCAATGTGACCCAGAAAAGATGATCACAGAAAGCAAATTCCTCCAGCTGGAGTCACTGCAGGAGCTCATGAAGGCTCTGGTCTCAGTGACACCAGATGAAGAGACCTATGATGAAGAGGATGCTGCTTTCTGCCTGGAAATGCTGCTGAGGATTGTGCTAGAGAACAGGGACCGTGTTGGCTGTGTGTGGCAGACTGTTCGAGACCATCTATACCACCTATGTGTCCAGGCCCAGGACTTCTGCTTCCTTGTGGAGCGGGCAGTGGTGGGGCTGCTGCGCCTAGCCATTCGGTTACTCCGGAGAGAAGAGATCAGTGGCCAGGTACTGCTCTCCCTGCGCATTTTGTTACTAATGAAGCCCAGCGTGTTGTCCCGAGTCAGTCACCAGGTAGCCTATGGGCTCCATGAACTCCTTAAGACCAACGCAGCCAATATCCACTCAGGCGATGACTGGGCCACTCTCTTCACACTGCTGGAGTGCATTGGCTCAGGTGTAAAGCCTCCAGCTGCCCTGCAGGCCACAGCCAGGGCCGACGCACCTGATGCTGGGGCCCAGTCAGATAGTGAACTCCCATCCTACCATCAAAATGATGTGAGCCTGGACCGGGGGTACACTTCTGACTCAGAGGTCTACACTGACCATGGCAGACCTGGCAAGATTCATCGATCGGCCACGGATGCTGATGTGGTCAACAGCGGTTGGTTAGTGGTGGGGAAAGATGACATCGATAACTCTAAGCCAGGGCCTGGGCCCAGCCGGCCAGGTCCTTCACCCCTGGTCAATCAGTACAGCCTAACGGTGGGGCTGGACCTCGGGCCACATGATACCAAGTCCCTGCTCAAGTGTGTGGAGTCACTGTCCTTCATCGTGCGTGATGCTGCCCACATCACACCTGACAACTTCGAGCTCTGTGTCAAGACTCTCCGCATCTTTGTGGAGGCCAGTCTAAATGGCGGGTACAAGTCCCAGGAAAAACGTGGCAAGAGTCACAAATATGACAACAAAGGGAACCGCTTCAAGAAAAAATCCAAGGAAGGCTCAGTGCTTCGGCGGCCTCGAACCTCCAGCCAACATGCCGCTAGGGGCGGGCATAGTGACGACGATGAGGATGAAGGTGTGCCAGCCAGCTACCATACGGTGTCTTTACAGTTGCTAGATCTGATGCACACCCTGCACACAAGGGCAGCCTCCATCTACAGCTCATGGGCGGAGGAGCAGCGCCACCTGGAGACAGGTGGCCGGAAGATTGAAGCTGATTCACGCACCCTCTGGGCTCACTGCTGGTGCCCTTTACTGCAGGGCATTGCCTGCCTGTGCTGTGATGCCCGGCGGCAGGTGAGGATGCAGGCACTGACCTATCTGCAGCGAGCACTGCTGGTACATGATCTGCAGAAGTTAGATGCTCTGGAATGGGAGTCCTGTTTTAACAAGGTGCTGTTTCCTCTACTGACCAAGCTCTTGGAGAACATCAGCCCTGCAGATGTGGGTGGGATGGAGGAGACCCGGATGAGGGCTTCCACCCTGCTCTCTAAGGTCTTCCTGCAGCACCTGTCTCCACTGCTGTCGCTCTCCACCTTTGCGGCCCTCTGGCTGACCATCCTGGACTTCATGGACAAGTACATGCATGCAGGCTCCAGTGACTTACTGTCAGAGGCCATTCCAGAGTCTCTGAAGAACATGCTCCTGGTGATGGACACAGCAGAGATTTTCCACAGTGCAGATGCCCGAGGAGGCAGCCCCTCAGCCCTCTGGGAGATCACCTGGGAACGCATTGACTGTTTCCTGCCCCACCTGCGAGATGAGCTCTTCAAGCAGACTGTCATCCAGGACCCTGTGCCCATGGAGCCTCATGCCCCCAAACCGCTGGCCTCAGCACACCTGACTCCTGCTGCTGGTGACACTAGGAGCCCTGGCCATCCACCTCCCCCAGAAATGCCCTCTGAGCTGGGGACCCGTGACTTTGAGAAGCCCGAGGGCCCCCGACCTGCTAACAGCAGTTCTTCTGGATCACCAGTGGCGTCCAGCCCCAGCAGGCTGAGCCCTACCCCAGATGGGCCTCCTCCGCTGGCTCAGTCCCCATTGATCCTGCAGCCCTTGGCCTCCCCGCTGCAGGTGGGCGTGCCCCCCATGACTCTGCCCATCATCCTCAACCCCGCTCTCATTGAGGCCACCTCACCTGTGCCCCTCTTGGCCACACCTCGTCCCACAGACCCCATGCCCACCTCTGAGGTCAACTAAGGCAGGCCCCTCAGCTATCAGGACCAGTACTTCGTAGCAGGCTGTCCTGGCCCCGCTCTCAGCTGTCCCAGGGGCCACAGACTCTTCAGTCCCAGCCCAAGCGGCTGTCACTGCTTTTTGGATGGGGATGGGAAATGGAACTTTTATGGCCCCTCCTAGGACCCACAGTTAGTCTGTGGGACCTTCCTCCTCTGCTCTCCATTCCTGGGAGTCCAACCTGAGAGCACACTCAGGTATCACCTGCAGGCTGGCAGCTCCGGGGAGGGAGGCATCACTGTGCCAGCCCTGCAGTGCCCACCCTTGGGCCCCTCCTGCCCATGTCAGGCATCGAGAGCCAAGTCAACCACTCTGCACTTTGTTTCCCTTTCCCAGCCCCACTCTCACTAGCCCTGGACCACCACCTCTAGTTTTTCCTTTTATTAATTGGTCAGTTTGGAGAGTTGATTTGCGCCATAGAGTGTGGGCAGGTGGGACTGGAGAAAAGGAATGCCCACAGGAGCATGTACATATGGAAAAACAGGAAAACAATGGACTTTTTATGATGTAATAAATGTCTTAGTACCAACATCATGGCCTTTTCTTCTGGTTTCCTTCTTGAGCTTGTGGGTACCATGTTCTGGGATACGTAGGCCCTCACATGAACAGAGGCCGAGCCTACCAACCATGGTCAGGATTCCTTCACCACTGCTGCTACCCACC TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 s 5' 0 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 TCONS_00150523 s 5' 0 EMBV3_08832 TCCCAGTGCAGGAGACCTGGGTTCGATCTCTGATCGGGGAATTAGATCCTGCATGCCACA Gene GeneID:518033|SEC14L4:NM_001075765:56_cdna Constitutive 0 NULL GeneID:518033 17 GENE SEC14L4 MGC142631 SEC14-like 4 (S. cerevisiae) EMBV3_19881 TTTTCCTCGGTTTGGGCCTGGAGGAGAGCGTTCAGTGTGTGCCAGTGCTGCTTGCATTGA Gene GeneID:526306|EXOC3L:NM_001075882:312_cdna Constitutive 0 NULL GeneID:526306 18 GENE EXOC3L MGC140481 exocyst complex component 3-like EMBV3_39804 CAGATTCCGAGTGTGCCCATATAAAGTCGCCAACATAGCTGAAGACTCAGACGTTGGTCA Gene BVV0101_063481 - 1 EMBV3_21358 GK000011.2:4058852-4173048 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023817 1 XLOC_014366 NonCoding TCONS_00023817 XLOC_014366 NonCoding NonCoding - 11:4140249-4141249 - TSS17632 662 2 TCONS_00023817_1 38 0.104229607250755 3 0.34034034034034 0.00019867326070801 0.000151789062339128 0.000475281419308929 8.78083067963536e-05 0 7.29463016881283e-05 0.00071354754133623 0.000321645731312762 0.000238372945669513 0 0 0 0 0 0 0 0 0 0.00015165111980248 9.77687684321522e-05 0.000385197922778933 0 0 0 1.04659727920821e-05 3.192809863012e-05 0 0 0 0 XM_005205827.1 NUB1 PREDICTED: Bos taurus negative regulator of ubiquitin-like proteins 1 (NUB1), transcript variant X1, mRNA. 4e-10 69.8 84.62 0.0966767371601208 0 noncoding 0 0 0 0 -0.018708942767821 0.87931892008065 -0.0199980259300938 0.672194981379062 ATTGTGTGTTTGAGTAAAAGTAAAAGTTGTTTTCTATATAACCTTGTGTGTCCGGGGAGTCTCCAGGCTAATTCGTGGGATGAATCATTGTTGTGACACTGCAAACGGGGAAGAAAGGCTGCCAGCGGCCTCGCAGCCTCTCCTTACTTTCTTGTGGAGACCCGCCGGTCCAGGGAACGGAGGCCACTGCTGCTGACCCTTGAGAAGCTTCCATGCCAGCTAGAAGAGCTCATGCTAGTAGCACATCGATTGATGACCAACGTCTGAGTCTTCAGCTATGTTGGCGACTTTATATGGGCACACTCGGAATCTGCAACACATTTTAGGTGGTGGGTTTGGGGATTTTCCCTGCAGGCACTGAAGACCCAAGAAGCTCGTGTTTGTACCTCTATCTGCAAAGAGCCAGGGGAGAAGCTTGGAAGGGTCTCTCTCCACTCTTGGCTTTAACTGGAGCAAAATCCCAAATAAAAGCGTCAGAGGCAGGAGGAGCCTGGCGGGCTACATACAACCCATGGGGTCATAAAGAGTTGGACGCGCTGAAAGCAACTGAGCACCTCAGGGCACAGAAAGAAGTTAAAGACAGATCGCAGTTATTTGAGCAAATAAAGAGAAGTTTACTTATGAAAATAAAATTTGTATAATCCCTTTGGAATAAACCATTC TCONS_00026705 r 5' 1648 TCONS_00026705 r 5' 1648 EMBV3_34886 TCTCTCTATAAACTCCACCCCCCAGGGCCCATAATCACGGAATTGCACAGAGAAGACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33728 GTAAGGGCTATAATCTTTGACGGTCCCAAAGCAGTGCAGCTCTGTAGAAGGTAGTGGAAG Gene BVT0102_064641 + 0 NULL GK000029.2:42725839-42734925 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165297 TCONS_00165296 1 XLOC_100480 Coding TCONS_00165297 XLOC_100480 NonCoding Coding LOC100847649 29:42713100-42734093 = TSS123505 2349 2 TCONS_00165297_2 105 5 0.888338414634146 0.00516077886143219 0.00482698639051138 0.00362831903923638 0.00296601771134327 0.00341546241523164 0.00134321939801081 0.00263530599215564 0.00483451079666587 0.00410875894916039 0.00292531926857062 0.00172200585145039 0.00272947121499679 0.000644335185558025 0.00189641836660768 0.00099864115965796 0.0281318987700291 0.00742827789744846 0.0364421391134602 0.0033763437432452 0.00460787732795923 0.00115490038563552 0.00910762004332501 0.0091627278116619 0.012114234526061 0.00359548356292258 0.0045200200419446 0.00278115568276187 0.00337755651869637 0.0028375354812209 0.00628611126649189 XM_005227211.1 RTN3 PREDICTED: Bos taurus reticulon 3 (RTN3), mRNA. 0.0 4213 100.00 0.994040017028523 NM_001265590.1 RTN3 Homo sapiens reticulon 3 (RTN3), transcript variant 6, mRNA. 0.0 1225 81.75 0.539378458918689 0 noncoding 1 1 1 1 -0.0804018051753237 0.470563041047159 -0.00547821627767617 0.9273770367972 TCTGATGTTGGCCTTCACAGCTTGCTGTCTTCATGTGGCTGATGACCTATGTTGGTGCCGTTTTCAATGGGATCACCCTTCTGATTCTTGCTGAACTACTCGTTTTCAGCATTCCAATTGTCTATGAGAAGTACAAGACCCAGATTGATCACTATGTTGGCATTGCCCGCGATCAGACCAAGTCAATTGTTGAAAAGATCCAAGCAAAACTCCCTGGAATCGCAAAAAAAAAGGCAGAATAAGTACATGGAAACCAGAAACACAACAGTTACTAAAACCCCATTTAATAGTTATAACGTTGTTACTTGTACTATGAAGGAACGTGCTCGGTGTCAGCTTGAGCCTGCATTCCAAGCTTTTTTTTATTTGGTGTTTTCTCCCCTCCTTTCCCTCTACCCTCAGTATCAAGCACAAGAATTGTTGGACTTAAACAAGAACTGATACCTTAGAAAACCCAAAAGAATAAAGAAAGAGTCAAATTAATAGGATAAATCAGTACCTTAATGATGGTGGAGCTTTTACCTGTAACTTGAAAGGAAGGGGAAAATTGGAGGTAAAGGAGAAAATGAAAAATAAAAACACATCTCTTGGGTTCTTGTATCCAAATTTCAAGGACTAGTCAGTCTTCTAGAGCTTCCCATCATAGTTTTGCCCTTATTTTTAAGTTAAGAAATAATGATTAACTTATGAAGAAATTATCTGGGGACAAGAATGGGATCCTTCCCTTGTTTTTGTTGTTGTTTTGCAGTCCTGATCCCATCTTTCTGCCCCACGACGTGAGCAGCTACTCCTAATCTTCTTCTTTTTCATTAAATGATATAACTTTCAACTCTGTGAATAACTTATAGTTGATAGTGATGATTCCTGATTCCCAGAATACCATCTGATAACCAGGAATGGAGTTGGAAGGTCGGACGGAGGAGCACACAGGAGCGCTGCTGTGACTCCCGCGCGTCCTCAGGAAGGAAAGGCTCCGCATGGGGGACGGTGGTGTCTGTGTCGTTTGTTCTGGACACCAGTTCTGAGCTGTAGTTGGAGAGCTTATTCCTGAATGTGCTTTCCTCCCTCTTTCCTCCCCTCAAGTTCAATAAATATGGTTGTACTTTTCTTATTATAAAATAAATGTCTGTAACTGCTGTACACTGCTGTAAACTTGTTAGAGAAAAAAAAAAATTAATCTGCATGTGGGCTCCTCCGTTATTGAGTTATTGTAATCCTGTCTCAGTCCGTGGCGGGGAAACATTCTCAAGAGGTGAGCTACAGAAACACAAAGGCCTTTTTCTCTTTTCCCTGCACACTCCATCTTTACCTGTGCTCATCGTTTTACCCTGAGGACCAAAGCTGCGCTGGCGTGCGCGGAGACCGTATCTGTGGTTGAGACCCCACAGATGAGTGTAGGGAGGTGCACTTTGTGGTTCAGGTGGGGTTTTAACTTAGAGGCTGGCTTACTGGGCATGTGTTATTTGAGGATTCCTTCCATCTTCAGGCACTTAAGCTGTCTCAGCACCTGTACCGTGGTGCAGGGTCCTCCTTTTGAGAGTGTTTTCCAAGAAGCTGTAGGTAAGGGTGACCAGGCAGGGCAGATTGTGTTGGCGGGCTCCATGCGCAATTAAAAGACAACAAACAGTTCACGTTGATAACAGATGGAGGGCATTTGGGAATCTTTGATTCCCACTTGAGACTTAACGTCTTCCTCCCCTTCCAACATTAAAATTCAGTAAACTTGAAAGAAAATCATCTGCGAATTCTTTCAGGTTGTAACTGACAGTCGTGATAATCCAGACAGAATATGCACTTGTGACTTTAAAGTAAGGGCTATAATCTTTGACGGTCCCAAAGCAGTGCAGCTCTGTAGAAGGTAGTGGAAGGATCTTTTCTTTCTACTTTGTTGAGAAAATTACTTAGGAATTTAGATGGGTAAAGGTACCTTGCCTTACTCCACTCTTATTTTCTTAGCCCCCTTTCCTTCTGAAATGTTTTAACTCATTTCACGTCATGGTAGGAAATGCACTCTCCACCTTCATTCCTTTGCCCTCCCAAGAAGTCAGTGCACTGATTGTCTTTTTGGGCTTCCCCTCCTAAGGGCCTTTCCCTGCACAGGAAGCCTCCACACCTAGCTTTTGCTTTGTCACTGCTGTGTTCAGATTGATTGGACAGATCTTTGTGCCACACAGGAATTTTTTTTTTTTTAAGAAAAATCTATAGGTGAAAAATTACTAATGAAACTGTGTGCGTATATGTGCGTGCAACATAAAGTACAGTAGCGCCAAGGAGCTTGAATCTTGGTTCCTGTAAAATGCAAATTGATGTGGTGTTAATAAAAAAGAAAAAAAGAACAAAATAGGGCTC EMBV3_03171 TCAACCCACGACTCTCGTCTTACCGCCTCAGTGACCTTGGGAAAGGTGTTGAAAGTGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39081 TCAAGTCTGCACAAACCCCCACCAGGCATCAGGACCTTGAACGTCTCCTGAAGACCAGAA Gene GeneID:514688|PPP1R15A:NM_001046178:217_cdna Constitutive 0 NULL GeneID:514688 18 GENE PPP1R15A MGC137534 protein phosphatase 1, regulatory (inhibitor) subunit 15A EMBV3_24027 AGGCGCTGGACTCTGAAGATGCTGAACCAAACTTTGATGAAGATGGCCAGGACGAGTACA Gene GeneID:535049|SLC4A3:XM_002685587:195_cdna Constitutive 0 NULL GeneID:535049 2 GENE SLC4A3 NULL solute carrier family 4, anion exchanger, member 3 EMBV3_14790 GAACCAAGAGTTATAAATCAGATGTTGGAGTTATTCAAGTCATGCTAAGAAAGCTACTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01006 GCGAGTGCCACGGTCCCCACGGACTTCTGCCCGTTGGTGACAGCAAAGACATTTAATAAA Gene GeneID:767843|POLR3H:NM_001076962:225_cdna Constitutive 2 NULL GeneID:767843 5 GENE POLR3H MGC134502 polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) EMBV3_00806 AGGGAGCGGATGATGCTGATAAGAGATCAGGAGTGGTCACAAAACCCCAAAAGAAGCCTC Gene GeneID:518447|IQCF1:NM_001075773:190_cdna Constitutive 0 NULL GeneID:518447 22 GENE IQCF1 NULL IQ motif containing F1 EMBV3_02576 ACCTCGAGGACTGGGGAATATCAGTTCTCTGACCAGGGATCAAATATGTGCCCCCTGCAA Gene BVT0102_410834 + 0 NULL GK000010.2:23408415-23427473 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06280 TGGTCCACAGCATCTGGGGTCTTCACTACGACAGATTCTTTCAAAATGGGACAAGAGTTC Variant GeneID:530484|MGC165715:NM_001102129:32_cdna 781^882 1 EMBV3_12278 GeneID:530484 17 GENE MGC165715 NULL hypothetical LOC530484 EMBV3_17771 AGCCTTCAGCTAGAAGTACACAAGGTGCTACAGGAAGAAGAGACGATCCTGATGTCTTCC Gene GeneID:613356|SH2D1A:NM_001034733:21_cdna Constitutive 0 NULL GeneID:613356 X GENE SH2D1A MGC128725 SH2 domain protein 1A EMBV3_36305 TGGGACCCAAGTCGCATTTAGAGCGAAAACGAAAAGGAGAACCTCTCCGGCTTGGTCCAA Gene BVV0102_091468 + 0 NULL GK000018.2:23312758-23592717 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082580 1 XLOC_051048 Coding TCONS_00082580 XLOC_051048 Coding Coding - 18:23316129-23332177 - TSS62262 1578 3 TCONS_00082580_1 134 0.0544993662864385 4 0.901913130180096 0.000625104206837433 3.8206943125694e-05 0.000175931551039844 0.00012103648537757 4.38026623608786e-05 2.49351040118849e-05 5.54345251321687e-05 6.37200069901375e-05 0.000127502247735955 5.81136157626079e-14 0 6.9097540976402e-13 0.000138691281851509 0.000133396029206833 3.73095259004971e-05 0 0 0 0.000924768648669987 0.000900068354366429 0.000217387617792358 0 0 0 0.000109766708598442 0.000142873686191467 0.000133668894589778 3.83004389449633e-24 0 0 0 coding GCCATCCCACTCGCTCCAGCCTAGGACCCAGAACCCAGTTAACACTGGGGATTCGGGAAACAGGGCCTGCGACCAAAAGAGGATTAACCCTGCAGATGCCTGCCACGGCTGGGGCACAGTCTTTACAAACCAGCGGCAGGGAGTTGAGCAATCTGCGGGCGGCCGGAGCAGCCTGCTGGTGGGGGCCGCCGCCGCGCGCAGCCCGGGCATTTCGGGTGCTCCCGCTCGGCTTTAGGGGCACGCATTCCGTTTCTGCGGGTCTTCCCACGGCCGGCCTCTGGGCCCCCGCACAGTTTTTTATTTGCGGTTTGGCATGTAGCGGGGTCTACCACGCAGCCGCGGCCCCCAAAGATCATTTCTATCTTTTGGCCTGTGGATTAGACATCTTTAGGAACGGGAAAAATAAAACTACCCTCGAATTCTTCAAACCCGGTTTAGAGCGCATCTTTAATGAGGTCGGCGTGGCAAAGCTGGAGGTGCTCACGTGGACTTCCTTCTAACCCTCCTGAAGGTGTCCCCTGGTCTCCCCTCGGGCCAGGAGACTTTGGGGGACAGCGGGAGGCGCGCCCTCTGTTTGGCTCTTCTCATTCCTTTGCCTCTAGGCAGCCGAATAGGAGGGAAATCGGCTGGACCCGGATCTTGCCCCCTGCTCTTCCCCCTAAACTGGCCAAAGCTGCCGGACTGTCCGTAGACCCACTCCGCGGGTCTCCCTTTTGGACCAGGCCGGAGAGGTTCTCCTTTTCGTTTTCGCTCTAAATGCGACTTGGGTCCCAGGCACCAGGTGGGGCCCAGGTTGTGGCCTAACACGATCGCCTCGGGGGCCGGGAGGCAGCTCCGGCTGCACACCCCGCCCTAGCCGGGGCCCCTCCGGGCCATTGGGGATCTCTGGCCTCCAGTCGGCCTCAAGCCCCAACCCTAGGTCCCCAAGGCCGCCCTCCGGGCCGCGCTTGTTTCCGGCGCCCGGAGGAGCCCGGCGCTCCCAGACGCCACTTTTCCCAGTGAAATCTGCTTTTATTTGCTCCGAGCAAACCCCGGGCTCTCAGTGCTCCCGCCTGATGGATGCAAATGTAAATGTGCACTTATTTAATTGGATCAGGCCCCAAGATAAAAGAGATAAACGGCTCCCCGTTTGCTAACTTATTTTCCGAGGCAGCGCCGCGTGGAGGAGAAGCTAATGAAGGAGGGGCGCGTCGCCGGGCGCTCGAGCTCTCCGCGGCGGTGCGCGCTGGTCAGTCGGTTCGGCTTGGACCGCGGCTCCTCGTCCATCTCTACTGCCCGCCGGGTAGGATCCGCTTGGTACCTTCGGTGCAGCAGGACCAGAAAATGGTGGAGCCTCTATCATCCTGGGTCCCAGGCTGAGGACAACATGGAGTGGAGACCCCTGCTGACCCTCGATGGATACGCACCAGCTTATCAGTCAATGAAGATGATGTACGAGATTCTGCAGCTGTGGTGAAGGTTTGGCGATGACTAAGTTCTTTGGAAAGCAGAAAAGAAGTAAAACATTCCTGAAGCTTGAGTGTGATCGTCTTTATGAATAGGCACCAGCAGTTAAGAAACGGATGTGCGTTCCCCACC TCONS_00082579 s 5' 0 TCONS_00082578 s 3' 3373 EMBV3_08852 TTCTAGGTGGGTTCTTTTACCACTAGCACCACCTGGGAAGCTTGATCAGGATGAAAAAGG Gene BVV0101_000882 + 1 EMBV3_16789 GK000009.2:52048827-52921131 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40305 AGATCAAAGCCTCCAGATGGAAACGATAACGTCAGACAGCTGAGGACAGAGCTCCCAGAG Gene BVV0102_247894 - 0 NULL GK000003.2:33426234-33469021 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16596 AGGAAACGTGGATTCTGCGGGTGACCAGTCCCCGTGAGAAGACAGAGGAATGTTGCATAT Gene BVT0102_366712 + 0 NULL GK000022.2:58425419-58448091 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127622 TCONS_00127623 TCONS_00127624 TCONS_00127625 1 XLOC_077698 Coding TCONS_00127624 XLOC_077698 Coding Coding GRIP2 22:58364422-58426810 j TSS95423 5811 1 TCONS_00127624_6 1259 30 0.907336464327504 1.67258850191055e-07 2.9949913467846e-08 0.000413228723275563 0.000217102408686703 0.000428133152712958 0.000154233993389848 0.000375886428711489 7.16572390821089e-05 1.63832887270001e-05 6.92021627599667e-100 2.50335849155787e-05 5.52154116785779e-10 4.53473763275674e-05 5.06187811977573e-05 2.91714832689466e-05 0 0 0 0.00033772183631331 0.000174327507433223 8.85746488117919e-05 3.65609741638997e-09 1.45042400976871e-08 1.12681883032098e-08 0.000428099399076421 1.92774751673818e-06 0.000147764195435637 2.23680732829796e-05 1.30441687940809e-10 0 XM_005223155.1 GRIP2 PREDICTED: Bos taurus glutamate receptor interacting protein 2 (GRIP2), transcript variant X4, mRNA. 0.0 9367 99.49 0.898812596799174 NM_001080423.2 GRIP2 Homo sapiens glutamate receptor interacting protein 2 (GRIP2), 0.0 3999 84.39 0.610394080192738 TCONS_00127624_6 sp|Q9C0E4|GRIP2_HUMAN GRIP2_HUMAN Glutamate receptor-interacting protein 2; 0.0 1850 89.65 0.81890389197776 3 coding 0 0 0 0 -0.0154578534249955 0.881350058770372 0.0245537470940581 0.649159380019598 ATGCTGGCCGTGTCGCTCAAGTGGCGGCTGGGCGTGGTGAGGCGACGGCCCAAAGCCATGTCCCTGGTGACTTTGGCTTTTCTCCTGATTCGGGGCATGGGGCTGCGGGTGGAGGTGGACCAGCAGAGAGCTGCCCAGTGCCCCTCCCGGGGCATCCGCAGTGATGGAAATGTAGAACACTCAAACCCTGTGCCCACGAGCGACTGGCGGCCCGGGCCCCTGCAGACCTGGCTTCTAGCCGCACGCACGCCCAGCAATCTGTCCTCGCAGAGCCTCTCGCACGCTTGCTCTTCAACCATCTATGGCTCCCACTGTCTGCAGGATGAAAGCCTGGCTCCTGGCTGCAACATGCTGTTCAGTTCCAGGCTGTTGACACCCCGAGTCCCCATCCCCTATCCTTCTCCCAGCACCTCTGCGGTGTATGGCTCTCTGCCACTGGGGGATGCTCCGGCTAACAGGCTGGGCTCGTCTTTCCCACCTTTGGGCAGAGGAGACGGAGGCCTGGGAGAAGAAGCTGGAATGTCCGTGGAAGGGCCAAGGGGCTCCGAGGCAGAGGGCCGCCCGCTGCAGTGGGTGGACATGTGCCCAGCCAGTGGGAGCCAGGAGCTCCCCTCCCACGGCCCCTCCCTGGGGAGGGCGAGGGAGGGAGCCGGTGGTGGCACCGGGGAGACAATAGCAGTCATGCTGTGTGGGTTCAGCCGGGAGACCCATGGAGAGGCGGACAATGGGCCTTACACCAAAGGAGACAAGGACACCGGAGCAGCCGACGGGGCTCTGGCGCGCCGCCGGCAGAGCATCCCAGAGGAGTTCCGAGGGGTCACCACGGTGGAGCTGACCAAGAAGGAGGGCAGCACGCTGGGCCTGACCATCTCTGGGGGCACCGACAAGGATGGGAAGCCCAGGGTCTCCAACCTGAGGCCTGGGGGACTTGCGGCCAGGAGTGACCTGCTGAACGTGGGCGACTACATCCGGTCAGTGAACGGGATCCACCTGACCAGGCTCCGCCACGATGAGATCATCACCCTACTGAAGAACGTGGGCGAGCGCGTGGTGCTGGAGGTGGAGTTTGAGCTGCCCCCGCCCGCCCCCGAGAACAACCCAGGGATCGTTTCAAAGACAGTGGATGTCTCCCTCCTCAAGGAGGGCAATAGCTTTGGCTTTGTCCTCAGAGGAGGTGCCCATGAAGACGGGCACAAGTCCCGCCCACTTGTCCTGACCTACGTGCGGCCCGGCGGCCCTGCCGACAGGGAGGGCTCCTTGAAGGTGGGGGACAGACTGCTCAGCGTTGACGGGATCCCGCTGCAGGGGGCCAGCCATGCCACTGCCCTGGCCACGCTGCGGCAGTGCAGCCACGAGGCGCTCTTCCAGGTGGAGTACGACGTGACCATTCCGGATACGGTGGCCAACGCTTCAGGGCCCTTAATAGTGGAAATCACCAAGACTCCAGGGTCAGCCTTGGGGATCTCCCTCACCACCGGCTCCCACCGGAACAAGCCCGTCATCACCATCGACCGCATCAAGCCGGCCAGCGTGGTGGACAGGAGCGGGGCCCTGCATGCCGGAGACCACATCCTGTCCATCGACGGTACCAGCACTGAACACTGCTCGCTGCTTGAAGCCACCAAGCTCCTGGCCAGCGTGTCGGAGAAAGTGCGGCTGGAGATCCTGCCTGCGCCCCAGAGCCGGCGGCCCCTCAAGCCGTCAGAGGCAGTGAAGGTGCAGAGGAGCGAGCAGCCGCATCGCTGGGACCCCTGCGTGCCCTCCTGCCACAGCCCCCGGCCCGGCCGCTGCAGGACGCCCACCTGGGCCGCCCCTGCCGGCCAGGACCAGAACCGCTCCTTATCCTCATCTCCCTTCTCCTCGCCGACCGTGAACCACACCTTTTCTTGCACCAACCCCAGCACTCTGCCTCGTGGATCCCAGCCCATGAGCCCCCGGACCACAATGGGGCGGAGGCGGCCGCGGAGAAGGGAACACAAGAGCTCATTGTCGCTGGCCTCCAGCACGGTGGGGCCAGGCGGACAGATTGTGCACACGGAGACCACGGAGGTCGTGCTCTGCGGAGACCCCCTCAGCGGCTTCGGCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGACTTTGTCCTCCCCACCCCTCGTGCGTTTTATTGAGCCTGACAGCCCGGCGGAGAGGTGTGGACTGCTGCAGGTAGGGGACCGCGTCCTAGCCATCAACGGCATCGCCACCGAGGACGGGACGATGGAGGAGGCCAACCAGCTGTTGCGGGACGCGGCGCTGGCCCACAAGGTCGTGCTGGAGGTGGAGTTTGACGTGGCTGAGTCCGTCATCCCAAGCAGCGGCACCTTCCACGTGAAGCTGCCCAAGAGGCGCGGCGTGGAGCTGGGCATCACCATCAGCTCGGCCAGCAGGAAGCGAGGGGAGCCCCTGGTCATCTCCGACATCAAGAAAGGCAGCGTGGCGCACAGGACCGGCACCCTCGAGCCAGGGGACAAGCTGCTGGCCATTGACAACATCCGCCTGGACAACTGTCCCATGGAGGACGCTGTGCAAATCCTGCGCCAGTGTGAGGACCTGGTGAAGCTAAAGATCCGCAAGGATGAGGACAACTCGGATGAACAGGAGACCACAGGTGCCATCAGCTACACAGTGGAGCTGAAACGCTATGGGGGCCCCCTGGGCATCACCATCTCAGGCACAGAGGAGCCTTTTGATCCCATCGTCATCTCGGGCCTCACCAAGCGTGGCCTGGCTGAGAGGACTGGCGCCATCCACGTTGGGGACCGTATCCTGGCCATCAACAGTGTTAGCCTCAAGGGCCGGCCCCTGAGCGAGGCCATCCACCTCCTGCAGGTGGCTGGCGAGACCGTCACCCTGAAGATCAAGAAGCAGCTAGACCGCCCCCTCACACCCCGCAAGTCGGGCAGCCTCAGCGAAGCCAGTGATGCGGATGAAGACCCGCCAGAGGCGCTGAAAGGCGGTCTGCTGGCAGCCCGATCCTCGCCCACTGTGCCCAGCGTGGACAGTGCTGTGGAGTCCTGGGGCGGCTCGGCCACAGAGGGTGGCTTTGGGGGCCCAGGTTCCTACACTGCACAGACGGCAGCTCGGGCCATGACCCCCCAGGAGTGGCGGTCCAGCTGGCTGAGAAGCAGTCCCCCGCTGACCGAGCCCCGGAGGACGAGCTATACCCCAGGCCCTGCTGATGAGAGCGTCCCGGAGGAGGAGGAGGAGGACTGGGAGCCACCCACTAGCCCAGCCCCTGGCCCCAGCCGCGAGGAGGGCTTCTGGCGCACGTTCGGGGAAGCCCTCGAAGACCTGGAGTCGTGTGGTCAGTCAGAGCTGCTGAGGGAGCTGGAGAGCGTGGCCCCGGAGGGCAGGCCCGGCCACCGGCCCTGGAGGAGGAGCCGGGAGCTGCGAGCCTCCCCCGAAGAGATGCAGGAGCTGCTGCTGCCAACGCCCGTGGAGATGCACAAGGTGACGCTGCACAAGGACCCCGTGCGGAGTGACTTCGGTTTCAGCGTCTCAGACGGCCTCCTGGAGAAGGGCGTCTACGTGCACACCGTGCGGCCTGACGGGCCAGCCCAGCGTGGGGGTCTCCGGCCCTTTGACCGGCTTCTCCAGGTCAACCACGTCCGCACGCGGGACCTTGACTGCTGCCTGACCGTGCCGCTCCTGGCTGACGCGGGCGATGTCGTGGAGCTGATCATCAGCCGCAACCCGCTGGCCCAGACCAGCCGGTCCCCGCGAGCACCCGGCCCCAGCGGCCCACGGATGCTCTGAAGTTGGCCCATGATCTGGACATCCAGGAAGATCCTGGCTCCCACGCCTGCAGCCGGACTGGAGAAGTGGCCACTCGCTTGTCCATCTGTCATCAGGCAGGCTCGGACCGGACTTTGTCCTCCAGATCTGTGGTGGCAGGGGTCTGGGCCTGTTCCAGTGACATCGAGGTCTTTCTCCAACTGGACCTCTGAGATGTGCCAGGGTGGGGCGGGGCACCCAATAGAGGTGAAGGCAGGTTGCTCAGCCAGGAGTAAAGGGGCTACTCCAGGTCCCTGCAGGGCCCCTGGGAAGAGCGTCCAAGTGGGCACAGCTCAGCGCCACGCAGGGAGCGATCGCCCAGCAGAGCTGTGGAGCCGAGTGACTGCAGGGCAGGAGTGAGCTCCCTGTCTCAGGAGGTGAGCAAGAGGAGCCGATCCCAGCTGCGTGGTCGCAGGCAGGGATGTGCAGCTTCTTGGGGATGGTTAGTTTCCCCTCAGGGGAGCACCTAGGGTGAGGCTGGGGGCTACTTGATCTGGACGGCCTCCCGCCAGGAAAGATGGAAGGGGGCCAACCCCCTTCTCTCCAGAATCTGGGTCCAGGGCTCACCGGCACACCCTCCCATGCCGCACTCAGGAGACTTGGAGCTGGGGCGTCTCGAATCCCAGGCCCTCTGAGCAGTTCTTCCATTTCTGAGACTCTGGTCGAAGCCTCTGTGACTTGTGATCGCATTTCTGGGCCCGTTGGGTGAGCTTCACAAAGCGGGCTTCAGGCTATCCATCTCTCCCTCTGCTTTCATCGGACGTGTGGCCATTGCCCGGTACGAGTGCACCCTTCTCAGCCCAGGCCCCTCAGGGCGGGAGGGAGTCGTTCTTGGACCGAAGAGCCAGGGGCATTCCCTTCCGCTGCTGTGACCGTGAAGATGGGGAACCGTGGAAACAGGATTCGTGTGAGGGGATCCAGCTCCTCACCAGGCCGGCAGAGGAGGGGGCAGAAGCAGATGGAGAGACTGGAGGGGTGGGGGGAGACAGGCCATTCCTCCTCACTCCTGGGGGCAACAGTGTCCAAAGGGGTCATGGAGGGAAGTGGATTCTTGCTAGAAAATCTGGAAGCACCAGCATCGCTTAAAATGGTTTTCCTCATGTTCTGCTACCTTTGGGTTTGGAGAAGGGCCCGGGACATCTACCTGGAGGTCAGGACTGGGCCCCCCACCCCACCCCAGGGTTGGAGGTGGGCAGAAAGCATTCAGCCAGTTCTCTGGCCGTGCTTGGACCCTGCCCAGCTCTTAACAGGGTCCCAGGAAAACAGAGGCGCCGCCCGCCCGCACCTTCCTCCTCGCACCCTTGTGCCCCAGAGTAACGCTCTTCCCCTCAAGGGGCTCGGTGAGGACCCCAGAGCTGTGTTGTTTGCACACTGGGTCACTGCACGTTGCCACGTGCCCCCTGCGGGCTGACCCCTCTGCACGATTAGGGCGGGGACGGTCTCAGAGCCAGCTCTGCCTGTGGGAGGAAGATGCGCCCTGAACCTGGCCAGCGCCCCCATCCTCGGGCTGAGGCCTCCGCCACTCCCCCACACGTCTGCAGCCGGGCCCTGCGGGTAAGCCTCAGCCTCCTGGCTGCGGCCGGCCTTCTCATATGCAACATTCCTCTGTCTTCTCACGGGGACTGGTCACCCGCAGAATCCACGTTTCCTGACACCCGTCTCCCCAGCGAGCATCCTGCCTGCCTATGCATTTTCAGTACAGCCCCCCGCAACGTGCCCCTCCCAACCCTAAAAGCTGTATTTTTCTCTGGCTGAGATTAGAGCATATTCCTTGTAAAGTATTTTTCTACAAGGGGTTTTCTTAGGGCTCTCGGGAAGCACAACGTGACAAGCGGTGCCAGATCGTAAAGGCCGTTTGGGGTCTGTCTGGGGACACGTGTACAGACCCCCCCAAGTTGCAATGACTTGGAGGTTGGGTGGGAGATTGCTGTTGGGGTGATTTTTTTAAAAAATAAAACTATTTACAACCACCTGGATTAGGGTGCCTGCTGTAAAAAATAAATCATCGGCTTG EMBV3_33024 ATGACGCTCTGCCCAATGGAGAGGTTTCCGTGTCGGTACCTGATCTCATCCACAAAGACG Gene GeneID:783439|C3H1orf226:NM_001083790:359_cdna Constitutive 0 NULL GeneID:783439 3 GENE C3H1orf226 MGC151722 chromosome 1 open reading frame 226 ortholog EMBV3_07697 TGGGAGAACTCACCAAGAAGCTGACCTACTGTGTAAAGGCAGAGCTAATCCCACTCATGG Gene GeneID:539372|HELQ:XM_002688402:70_cdna Constitutive 0 NULL GeneID:539372 6 GENE HELQ NULL helicase, POLQ-like EMBV3_05998 ATGAACTGTCCTTATTACCAACAGTGAAGCACTACAGGAGGCAGCTGTGGCATTGCTTCC Gene GeneID:538498|ZZZ3:NM_001102215:80_cdna UTR3_Alt 2 NULL GeneID:538498 3 GENE ZZZ3 MGC160076 zinc finger, ZZ-type containing 3 EMBV3_22872 GAATGAATGCAATGAGGTGTGCTTGCATGCTTCCTCGGAAACTAGACACAGCTGGTCCTC Gene BVV0101_038504 + 1 EMBV3_35422 GK000007.2:2909533-2910374 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211435 TCONS_00211445 TCONS_00211437 TCONS_00211440 TCONS_00211443 TCONS_00211444 TCONS_00211441 TCONS_00211442 TCONS_00211439 TCONS_00211438 1 XLOC_129875 Coding TCONS_00211442 XLOC_129875 Coding Coding MRPL55 7:2905858-2910117 j TSS158885 1153 1 TCONS_00211442_2 140 4 0.73015500234852 0.00174732574774057 0.00155334676989793 0.00294320384476125 0.00292180121802717 0.000542225933654925 0.000235618887305796 0.00109494425211298 0.000984930716831262 0.000868492365168766 0.00254302509719899 0.00220977486385656 0.00104314829008723 0.000535538207090333 0.00247740588824217 0.00188137445203857 0.0409211560713701 0.0132983580099053 0.0319489504617676 0.00736163672443979 0.00473389101376406 0.00246523181181784 0.020750306700596 0.0120369297557077 0.0160715407144224 0.00301684482115023 0.000912188523801007 0.0023440843862615 0.00649114936050822 0.0050157010902579 0.00768257116771847 XM_005208401.1 MRPL55 PREDICTED: Bos taurus mitochondrial ribosomal protein L55 (MRPL55), 0.0 1025 100.00 0.491760624457936 XM_005273059.1 MRPL55 PREDICTED: Homo sapiens mitochondrial ribosomal protein L55 (MRPL55), transcript variant X7, mRNA. 8e-60 235 72.99 0.349522983521249 TCONS_00211442_2 sp|P0C2B8|RM55_BOVIN RM55_BOVIN 39S ribosomal protein L55, mitochondrial; 5e-90 262 100.00 0.892857142857143 1 coding 0 0 0 0 0.719078858368471 0.241618972483777 -0.0617819080444315 0.296861111367506 GTTGCACACTGAGCCAGTGAATGACCCTAGGCCTTCAGGTGCTGCAGGGGCTCTCAGGAGGAATGTCGGCCAAGGGCAGCCTGCTTCGCCTGCTCTGGCAGTGTGGGATGACGAGGGCTGCCCCTGAGAGCTGCCGCTACCTGTATACATCCTCTTGGCGGGCTGACTGCAACAGAGCCTCACTCACTCGAGTGCACCGGCAGACCTACGCACGCCTCTACCCTATTCTCCTGGTCAAGCAGGATGGTTCCACCATCCACATCCGTTATCCAGAGCCACGTCGGATACTCACAATGCCTGTGGACCTGGACTCCTTGTCCCCAGAGGAAAGGCGTGCACGATTCCGAAAACGAGAGGGCCAGCTGAAAGAGAAGAAGGAGGAGCCAGAGCTCGCTGACGACTTTGATGTGGAGCAGTACAAGCAGTTTTGGACCAAAAAGTGATGGTGCCTGGAAGCTGCTGTGTCCTAGGGAATGCTGTGGAGCAGGGAGGGGCATGTGTCTTTAAATCATGAGTTGATGAAGCTGTATCTTGTGAAAAGATCAATACAAAGGACATTCAAATAACAGTCTTGACACTGTTGTAAATCCCTCAGAAAACATTTGTTCACCCTACGGATTCAATTCAGGGGTTGGCTAGTGGAGTAGCACTCCTCCACTCACTAGAATTGTTATCATTGAGTCTAATCTGGTCTGCTGTGATGATAAACAGAACTGCACTTGCCCAACAACTAGCTCAGTTTAGTTCAGATACTGACCCATCAGCAGTGACTGCCAACACCTTGGGGGTGACTGAGGCATTCTCTGCGCTGTCGGGGGGAATGAATGCAATGAGGTGTGCTTGCATGCTTCCTCGGAAACTAGACACAGCTGGTCCTCCCGAGGGCGGAGGCCGAGCGTGACAGGCACGACCTGACCTTGGCCGCTCTCCCAGGCAGCCGGCTACCTGATAGACACCTCCAACAGCTATAGTTGGAAGCCTTCAGTCGTCTCGTGCCTACCCCTCCTCCAGCACAGCCCAGACACGTCCAACAGCTATAGTTGGAAGCCTTCAGTCGTTGTCTCGTGCCTACCCCTCCTCCAGCACAGCCCAGACACCTCCAACAGCTATAGTTGGAAGCCTTCAGTCGTTGTCTCGTGCCTACCCCTCCAGC EMBV3_03352 ATTGCAAGACACACTCCTTCTCAATCGTAGGAACCCTGACCTCAGACCCGTACGACTTTG Variant GeneID:280958|VWF:XM_002687894:95_cdna 313^624 1 EMBV3_21602 GeneID:280958 5 GENE VWF NULL von Willebrand factor EMBV3_14813 AGCATTCACTTTCAGCGGGAGAAGAATGGAGGTGGAGAAGTCGAGGTGGTCAAATGTTCC Gene GeneID:511280|NMI:NM_001035098:85_cdna Constitutive 1 NULL GeneID:511280 2 GENE NMI MGC126958 N-myc (and STAT) interactor EMBV3_12756 CCTGCATCTCATCCAGGTGCCTAAAGAGCCGATTCAGGGGTATGAGCATAACGAGGAATT Gene GeneID:507833|TRMT112:NM_001045981:533_cdna Constitutive 0 NULL GeneID:507833 29 GENE TRMT112 MGC137487 TRM112L UPF0315 tRNA methyltransferase 11-2 homolog (S. cerevisiae) EMBV3_08071 CAGGTTCAGACTGTAACACTTTTAATAGAAGGAGAAGCCGAAGGACAACTTTCAATGGAC Gene GeneID:537051|ADAMTS9:XM_002696982:11_cdna Constitutive 0 NULL GeneID:537051 22 GENE ADAMTS9 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 9 EMBV3_21304 CTCAATACTCATGTGAATGTCAAGGAAAAGGCAGTGCAATTCAAGTTCTAAAAGAATGGA Variant GeneID:539299|SPATS2L:XM_002685501:14_cdna 349^457 1 EMBV3_39557 GeneID:539299 2 GENE SPATS2L NULL spermatogenesis associated, serine-rich 2-like EMBV3_31896 ATGATCCTGGGTTACTGGGACATCCGCGGGCTCCCGACTATGACAGAAGCCAGTGGCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37437 TCCTAATTGGCTTTGTCTCCTTTACATTCTGCTTTCTCCCTTCCCAAGTACTGAAACAAC Gene GeneID:514323|DDX17:NM_001101993:64_cdna Constitutive 2 NULL GeneID:514323 5 GENE DDX17 DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 EMBV3_22294 CCATCATCAGGATTGTGGTGGGAATCTCCTTTCGTAGTTTCTGCATCATCCTGCCGGTTG Gene GeneID:515619|LOC515619:XM_002693263:7_cdna Constitutive 0 NULL GeneID:515619 15 GENE LOC515619 NULL similar to olfactory receptor, family 52, subfamily H, member 1 (predicted) EMBV3_39706 GGAACACGTGACTAGTTTGGCCTTCCTGGCCTTGAATTGAGCACATTCTCCAGAACAACT Gene GeneID:516405|CMBL:XM_002696435:61_cdna Constitutive 0 NULL GeneID:516405 20 GENE CMBL NULL carboxymethylenebutenolidase homolog (Pseudomonas) EMBV3_05059 TCAACGTGGAGTACTGGAAAGTCCTGGCCACGCAGCACAAGTGCAAAATGAACAACCAGA Gene GeneID:515323|FZD10:NM_001098033:108_cdna Constitutive 0 NULL GeneID:515323 17 GENE FZD10 NULL frizzled homolog 10 (Drosophila) EMBV3_02457 CTGGCAGCAGACACAAGGGGTATCTTGGTCCTCATACCTGGAAATCCTATGCTCAACATT Gene GeneID:532541|CASD1:XM_002686656:89_cdna Constitutive 0 NULL GeneID:532541 4 GENE CASD1 NULL CAS1 domain containing 1 EMBV3_32981 CTAGAGAGTACTGAGAGCGGCCTTGAGACCACGAAGAATCTGGAGGTGGTGCTGTACTAT Gene GeneID:615922|CCDC136:XM_002686947:91_cdna Constitutive 0 NULL GeneID:615922 4 GENE CCDC136 NULL coiled-coil domain containing 136 EMBV3_36929 TCTTGGGACAGACCAAGCGAGACTGGATGAGCAGCTGACTTCCCTGGAGGAAAATGTGTA Gene GeneID:522113|MYRIP:XM_002696924:460_cdna Constitutive 0 NULL GeneID:522113 22 GENE MYRIP NULL myosin VIIA and Rab interacting protein EMBV3_32250 GAAGACAGGTGTCCTAGCTGCTGTTCTTGCATCACAACCTTCTATTCCTCGGTCTGTTGG Gene GeneID:536155|REPS1:XM_002690281:40_cdna Constitutive 0 NULL GeneID:536155 9 GENE REPS1 NULL RALBP1 associated Eps domain containing 1 EMBV3_06746 GTGCTGCATACATGGACTGTTACTGGCAAAGGAAAGTCTGGCTATTTGGCAGCATTTTAC Gene GeneID:535935|LATS1:XM_002690320:17_cdna UTR3_Alt 2 NULL GeneID:535935 9 GENE LATS1 NULL LATS, large tumor suppressor, homolog 1 (Drosophila) EMBV3_30718 AGTGCCTTCCTTCAGATCCAACAGAGACCACATCCAGGGGTTCAAGCTCCCACTAGACTT Gene GeneID:525765|THEM5:XM_002686076:344_cdna Constitutive 0 NULL GeneID:525765 3 GENE THEM5 NULL thioesterase superfamily member 5 EMBV3_19099 GAATTCCTCTGCCTCAGAACCTGAGCGGATACTCTCTGCTGCCATCATCGTCAGAAATGT Gene GeneID:533618|ARSK:NM_001035400:11_cdna Constitutive 1 NULL GeneID:533618 7 GENE ARSK DKFZp313G1735 MGC140691 arylsulfatase family, member K EMBV3_14873 ACACTCACGTGACTTCCATTCCCGGGTGAGGAGTACCGTATACTGTTCCTTCTTAAGACG Gene BVV0102_057050 + 1 EMBV3_19385 GK000022.2:15708181-15860350 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126224 TCONS_00126225 TCONS_00126228 TCONS_00126226 TCONS_00126223 TCONS_00126229 TCONS_00126227 1 XLOC_077397 Coding TCONS_00126225 XLOC_077397 Coding Coding SNRK 22:15783917-15878777 j TSS94744 875 1 TCONS_00126225_2 181 6 0.990839034777934 0.00445055730564942 0.00245199345447731 0.00318106051507477 0.00458237141010389 0.00495340363175463 0.000603684791702669 0.00294711726593065 0.00106033217018214 0.00319094212347512 5.92481254015662e-05 0.000316903661723509 0.000275800854601313 0.00184151510178542 0.00126519440998072 0.000220020128730009 9.6803476912552e-133 7.79915031545161e-159 1.69589807956954e-55 0.00243501951189719 8.13384450385396e-21 0.00274180247605066 3.28708915535356e-226 9.45089841646206e-80 2.03214962697258e-107 8.1768155668586e-10 0.00118976914744786 0.00416927944182382 0.000258329096953326 2.30169087507414e-59 1.85458933508583e-113 XM_002696930.2 SNRK PREDICTED: Bos taurus SNF related kinase (SNRK), partial mRNA. 0.0 1180 100.00 0.746285714285714 XM_005265245.1 SNRK PREDICTED: Homo sapiens SNF related kinase (SNRK), transcript 0.0 673 91.54 0.539428571428571 TCONS_00126225_2 sp|Q9NRH2|SNRK_HUMAN SNRK_HUMAN SNF-related serine/threonine-protein kinase; 2e-108 331 100.00 0.861878453038674 2 coding 1 0 1 1 -0.040311935705413 0.697956571227741 -0.00562447684635249 0.930624309290764 AAAGGCGCGCGCGCGTGTGCGTGTGCGCACACTCACGTGACTTCCATTCCCGGGTGAGGAGTACCGTATACTGTTCCTTCTTAAGACGGCTGCCTCCCAGTCCGGTCCTGCAGCACTCCAGCTTCCCAAGAAACACTGGAGATGAATAAATGATTCACCACGTGGCCAGGACTGCAGCCCTTTCTCTGGAAGAGAATTCAAGCCCACTTTATTTAAACCAAGGAAAAAGAAGCGATTAACAAAACACAGTGATAACAAGGATTACTCCACATGCAATTTGCAGGATGTCCATGACGATATTGAAAATGAATTCCTTATTTTCACCAGATATATGAGAAGATCCATTTTAAACAGTCTAAATATTTTTTCTCACGTCGGACCAGCATGGCAGGATTCAAGCGAGGGTGAAAAAGTGGCAGTAAAAGTTATTGACAAGACAAAATTGGACACACTAGCCACTGGCCATCTTTTCCAAGAGGTGAGATGCATGAAGCTCGTGCAGCACCCCAACATCGTGCGCCTTTACGAAGTGATCGACACCCAGACCAAACTTTATCTTATCCTGGAACTCGGGGATGGAGGAGACATGTTCGATTACATAATGAAGCATGAGGAGGGACTCAATGAAGACTTGGCCAAGAAGTACTTTGCTCAGATAGTTCACGCCATATCTTATTGCCATAAACTCCATGTGGTTCACAGAGACTTAAAACCTGAGAATGTGGTCTTCTTTGAAAAGCAAGGTCTTGTAAAGCTGACAGACTTTGGTTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACGAGCTGTGGCTCTCTTGCATATTCTGCCCCAGAAATTCTGCTTGGTGACGAGTACGATGCACCCGCAG EMBV3_01683 CTTAGGTCCCTGCCCCTTTGTTTACAGCTCCTGCTGCTTCTCTTGACTACAGCCTGGTTT Gene GeneID:539829|KIAA1949:NM_001076919:177_cdna Constitutive 0 NULL GeneID:539829 23 GENE KIAA1949 MGC143239 KIAA1949 EMBV3_02099 GCCAGTAGTAACTGGATACTTTTAATGTTGTTTTGTATTTTACAGAAAGTAGTATTACTA Gene GeneID:539787|THAP6:NM_001103290:98_cdna Constitutive 1 NULL GeneID:539787 6 GENE THAP6 MGC160078 THAP domain containing 6 EMBV3_03554 TTTGTAACCCACTCCTCTATTCATCAATCATGTCACCGGCTCTCTGCGGTCGGATGGTTC Gene GeneID:504200|LOC504200:XM_002693829:108_cdna Constitutive 0 NULL GeneID:504200 15 GENE LOC504200 NULL similar to Olfactory receptor 5AN1 (Olfactory receptor OR11-244) EMBV3_36680 GATACCTCCACAAGGTAAGAAACTTTTTGGCTCTATTTTTAGGATAATTACGAGATTCCC Gene BVT0102_137659 + 0 NULL GK000006.2:23370605-23390301 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41793 GATCAGAAAATCTCAAAATACACAAAAGAACTCACACAGGGGAGAAGCCCTTCAGGTGCG Gene GeneID:539312|ZIC4:XM_002685014:164_cdna Constitutive 0 NULL GeneID:539312 1 GENE ZIC4 NULL Zic family member 4 EMBV3_12443 GAGTCAGTTACCAGGCTCCAGCAAATCCACATTTGTTCTCACATGTAGCCATTCTCACTC Gene BVT0102_321202 + 1 EMBV3_41734 GK000030.2:128650610-128669634 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40781 GTGCCTCGTAGGCCTCCACACAGGCATAACCACTGCGGGTTTTTATTTGACTTGCCTGAA Gene BVT0102_016727 + 0 NULL GK000020.2:3066677-3111195 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30780 CTAACATCTGCTAGAATCCTCATCAAGGAGAAAAGAACAGGCCCCAAAGCACAGAGTAAT Gene BVT0102_231534 - 1 EMBV3_04576 GK000007.2:27418958-27491081 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219778 1 XLOC_133097 NonCoding TCONS_00219778 XLOC_133097 NonCoding NonCoding - 7:27458925-27460610 - TSS163776 1685 2 TCONS_00219778_3 72 0.110979228486647 1 0 0.000153417370304601 0.000363770460788019 0.000274599976887795 8.87089812808276e-05 0.000164083953126044 0.000125249733139773 0.000276876946462851 8.42452986431033e-05 0.000899053310486855 0.000568947492048503 4.61911727534522e-05 8.48829044979645e-06 6.81136413858278e-06 0.000823548330501708 0.000177613321785269 0 0 0 0.00017235764846847 0.000537756077795056 0.000333299441682627 0 0 0 0.000148026772211246 0.000150526385768529 9.73626961849778e-05 5.7004020199625e-06 8.64320679484005e-06 0 0 noncoding 0 0 0 0 -0.0230295969542022 0.858946527015858 0.0233282419338271 0.715770102980125 AATTGGCAGTCCTACAAGAACTAACCAATTATTTTTTGATGGAAATTCTTACTGGTTTATAAAATCTAAAAGCATAGAGACCTTCTATCTAAGTGACCTCTGATAAATTATACATTGAATGTTTTGTCAGGTGGCTATTCCAGAACTATGTTCCCTGAATTCCCCTGGACTAAGTCCAAGATGGACTTGAATTCAATATCAAGTCACTTTAGCACAGTTCCAAGATACTGTTATTCTGGACAAAACCCCACACTTGTAAAGGTCGACCTTTTACAAGATCGACCTTTACAACCTGTGAAAGGTTAACTTCTTTTCCATTTCCATAGCATCACCGATAGAGCAGAAGAAAAAGGTATTTGAAAGGAATCGTTGATTCAGGTTTTAATTTTTAAAAAGATTGTTGGCACGAAAGTTAAAGAGAAATGGCCGTATAACATATGATAGCTTCATAAATATAACTTTAAATAATGGCTTACCTAAAACTCTTAATAGGCCAACTAATTTTAGTTCAACTGAAAGTGATTCAATTCATTTAAGTTCAAAAAAGATTTACTGAGGGCTCACCATTTGCCAGGTACTGTGCTAAGCGATGGGGAAATAGGTTGTAACCAGACATTCAGGATTAACACCCTCACCAGACACTCAGTTTAGAATTTCTCTCCAATACAAAAGTCCTGGATTTAGTTTTATGTGAAAATGAATGTCAAAAATTTGGTTAATTGAACATTTTTATGCTCACTCATAATATATTACTCTGTGCTTTGGGGCCTGTTCTTTTCTCCTTGATGAGGATTCTAGCAGATGTTAGGAGGAGGTAAGAGAAGTTCTAACTTATTTTCAAATACCCCAGGTCTATCTCAAACAATAGTGCTTGATAAGTTCTCACAGACTGTGAACGGATAATATTAGAGGAGAAAAGGGACCTAGGAAATAGTTTGTATCTTTTATCATTTAAATTAAAGTTAGCAGTAAAACAGGTTCTGGGTTACAGGAGACCTGAATTTGGGTTCATATTATATTACAGAATGTGTTCTGTGACTTAAAATAGCCCTCTGGCATTTTGATTTTCATGGGTGGATTTCTTAAAACTTTGGGTATCACAGACCTCTTTGACTAACAAATGATATCTATCAATTCCCTTACCAGAAAAAAAAAAAAAAAAAGCCTTTGTACATGCTTTTGCACACACACACACACACACACACATGATAAGTACACAATTTTGCATTTACTTTCAAGTTGCTTAAGTGTTTTTATCAATGCTATTTGTGTAACCCAAATTATAAATTCCTTATTTAGAGGGAATAGTGTATTCCAGCACCTTTACTCTGTATCCTAAAATAAAATAACATGTTAATGAATGAGGGTATGAATATGTTATTGTTGCCTCTATTGTAAATCATGCAGATAAACAAGTGAATAATCTGCTCTTCCTAGAGACGTGCCCCAGACTCAAAAAAATCAGAATGGCTCTTCTCTTTGGACAGTAGAGCAAGTAACATACACTCCAGGGAAGCCTGGTTCTTGTAACTGAGCCACACTAGTAAATTTGTCATGTTGACTGTGAAATAAAGATTTTAATAATGAGAATATATTTCTTTCATAATAGAAAAAGAGAAAGGATGTAGCAAGGTGATTTGCTGTTAAAAGTGATTTTTTTTTCTGTATAAATCATGATTATTTCT TCONS_00212645 . 5' 30472 TCONS_00212645 . 5' 30472 EMBV3_22781 TTCGGAAAAGCACTGTTATTTTCCACACAGCGGGAGGAAGCACTGAAACAAAACAAAACC Variant GeneID:515016|MTUS1:NM_001075692:55_cdna 327^541 1 EMBV3_25728 GeneID:515016 27 GENE MTUS1 NULL microtubule associated tumor suppressor 1 EMBV3_21649 GAGCCACATTCTTCACTTGATAGAACTCAAGATTTGTCCTTAGCCAGCCAATTATCATGG Gene BVV0101_038821 + 0 NULL GK000026.2:35611052-35686377 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150928 TCONS_00150929 TCONS_00150931 TCONS_00150932 1 XLOC_091979 Coding TCONS_00150931 XLOC_091979 Coding Coding FAM160B1 26:35576491-35613798 j TSS112936 5502 1 TCONS_00150931_3 487 16 0.852945906824639 0.000663621839711742 0.000868141003680808 0.000529201596820521 0.000408761695116999 0.00086034648784564 1.61667442720907e-13 1.77136762747912e-08 3.5268809087407e-09 0.00111295911789995 4.80218560494293e-06 4.28202592208042e-20 6.03048672388843e-12 1.75508959765244e-05 3.55409844581996e-09 0.000210394248098071 0.00212914192275469 0.00161723916721947 1.10904946651479e-09 0.00046202475838108 0.000102775088820269 0.000274650596700743 0.000305482266805149 0.000666923985848404 0.000909738728141759 0.000199849138539413 0.000542446229500826 0.000510083685792613 0.000180664914031731 0.000120876561394248 1.00280394500181e-07 NM_001077948.1 FAM160B1 Bos taurus family with sequence similarity 160, member B1 (FAM160B1), mRNA. 0.0 3784 99.48 0.385314431115958 NM_020940.3 FAM160B1 Homo sapiens family with sequence similarity 160, member B1 (FAM160B1), transcript variant 1, mRNA. 0.0 2980 79.86 0.614503816793893 TCONS_00150931_3 sp|A0JNG7|F16B1_BOVIN F16B1_BOVIN Protein FAM160B1; 0.0 956 91.20 0.997946611909651 1 coding 0 0 0 0 -0.112921954280912 0.546879761611718 -0.00890182387926999 0.914895237434488 GCCGCCCGCTCACACCTGAAGCGGCCGGGCCGGGCCCGCCTTGGCCCTATGCTCGTCCTCCCTGCCCCGCACCGGCCTTCACTCTGGAGCGGCCCCGGCAGCCGCAGCAGGGGCGGCGGCGGCGGATCGAGGAGCTCTCCAGGTCGTCCCGGGAGAAGCTGCTGCAGTCCCGGGACAAGATGTTCTCCAAGTTCACCTCCATCCTGCAGCATGCCGTGGAGGCGCTTGCACCTTCTCTTCCTTTACAAGAAGATTTTGTTTACCACTGGAAGGCAATTACCCATTACTATATAGAGACTTCAGATGATAAAGCCCCGGTGACAGATACAAATATTCCATCTCATCTGGAACAGATGTTAGTTATCTTAGTACAAGAAGAAAATGAACGGGAATTTGGAGAGACGGGGCCATGTATGGAATATTTACTTCATCACAAGATCTTGGAAACATTATATACCTTAGGGAAAGCTGATTGTCCTCCAGGAATGAAACAGCAAGTCTTGGTGTTCTATACCAAACTCCTGGGGAAAATCCGGCAGCCACTGCTCCCGCACATCAACGTGCACAGGCCCGTGCAGAAGCTGATTCGACTGTGTGGTGAAGTCCTTGCAACGCCAACAGAAAATGAAGAAATTCAGTTTCTCTGCATTGTGTGTGCAAAGCTGAAACAAGATCCCTATTTGGTTAATTTTTTCCTGGAGAACAAGTTTAAATCATTGGTTTCCCAAGGAGGCCCAAATGCAATTTCAGAAGATGTATTAAAAAGTCAAGATTCCTTGTCAACAGATACAGGCCAGTCCTGTCAGGCAGAGGAACCGTTGGGCGCTTCTGGAACGGAGCACACAGACAGATCAGCCTTCTCATCAGATGGGTGACCTGTCCACGAGCTTGGAAAACCTCAGTGTCACTGCACTCCCAGAGGCTACAGTTGTTCGTCCAAACCAGGATTACAACCTAGTGAATTCTTTGTTAAATCTTACTAGAAGTCCTGATGGCCGAATAGCCGTGAAAGCCTGCGAGGGCTTGATGCTCTTAGTGAGCCTGCCGGAGCCAGCCGCCGCCAAGTGCCTCACGCAGAGCACATGCTTGTGCGAACTGCTCACCGACAGGCTCGCCTCCCTGTACAAGGCCCTACCTCAGTCAGTGGACCCCTTAGATATTGAAACAGTGGAAGCAGTTAACTGGGGCTTGGACTCATATAGTCATAAAGAAGATGCTTCAGCATTTCCCGGAAAAAGAGCCTTAATTTCATTTCTCTCCTGGTTTGATTATTGTGATCAACTCATAAAGGAAGCACAAAAGACTGCTGCTGTTGCTCTTGCCAAAGCTGTTCATGAAAGATTTTTTATTGGTGTTATGGAACCTCAGCTAATGCAAACTTCTGAGATGGGTATTCTGACATCAACTGCTCTGCTCCATCGCATTGTTCGGCAAGTAACCTCCGACATTTTGCTTCAAGAAATGGTGTTTTTCATCCTTGGAGAACAGAGGGAACCAGAAACTCTGGCAGAAATTAGCAGACATCCTTTAAGACACAGGTTAATTGAACACTGTGATCACATATCTGATGAGATCAGTATAATGACATTAAGAATGTTTGAACATCTTTTACAAAAACCCAATGAGCACATTCTTTACAACTTGGTCCTAAGAAATCTTGAAGAAAGAAACTATACAGAATATAAACCTGTGTGCCCAGAAGATAAAGATGTAGTGGAGAATGGATTAATAGCAGGAGCAGTAGATCTGGAAGAAGATCCCTTATTTACTGACATTTCACCAGATAACACTTTGTCAAATCAAGAGTGGCTTAGTTCCTCACCTCCTGCTACTCCAGACCACCCCAAAACCGATGGGAAAACTGAAGTCCACAAAATTGTAAATAGTTTTCTCTGTCTGGTCCCAGATGAAGCAAAATCGTCCTACCACGTGGAGGGCACTGGATATGACACCTACCTCCGAGACGCTCACAGGCAGTTCCGGGACTACTGTGCTATCTGCTTAAGATGGGAGTGGCCTGGCTCTCCAAAAGCATTGGAAAGGTGCAATTTAGAAGCAGCTTTTTTTGAAGGTCATTTTTTGAAAGTCTTATTTGACAGGATGGGAAGAATTCTTGATCAGGTTGTTGGAGACCTCATGGTTCGAATCCAGCGTATTCAAGACTTTACTCCCAAGCTTCTACTAGTCAGAAAGCGATTACTTGGTCTGGAACCTGAAGGACCTGTGATTGACCACATCACCTTGTTGGAGGGTGTGATTGTGCTGGAAGAGTTCTGTAAGGAGCTGGCGGCCATCGCCTTCGTGAAATACCACGCAGCCTCCACACCCTAAACAGCATCTTTCAAGTAACCAAGGGAATAGAACTATCATGTACATTTCATCAAAAAAGCCTCAGTTCCACCCAGCCACGTGACAATAAAAAGCCTTTTTAAATGAAGCATTGCTGTAAACTGGACAGAACCATTCAGAACCCACTGAGTGGACGCTCTCAGTACAGTGTTGTGTGATGTTGTTTTCACTGGCTTTATCATAATGGTTCTGTATATAAAGTTGCACATCCTTGAATCCAGGATACAATCAAAGGAACTTCAGGAAATAAGCATTTCTAATGCCTGTGTGAAAAGCTGCAAAATTTCTGATGTCATGACTTTGATGATATTTCTGTTAATGTAATATCCTTTTAGGTAGCAAGGCCTTTTGACATTCTTTGGGACTCAAGTGCTTACATTCTTTTGGATTAACAAGTAGCAAAAAATAAAAAACCAAAACCCTAATTTTATAACTTTTTAAGGTCAGAATTCTTATCAAACAAAATATTTAAAAGAACTGTAAATGAGAAAAAAAGTACAATTTAGAAACTATCAAATGAATTAATAATAGAAGATTAAAATGTGTAGAACACCATTAACTTTCTTCAGCTTTTCTAAGAATAACAGTTTAATATGATAAATTCTTGATTAATATATATATATATTTTTAAAGAAACGTTCTTTTACTCTTTTGTGCACACAGCCAGGTTAGTGATTGATTTTCATGTATGGGTCCCAGTTAATTTACACTTTGTCATTTTTGCAACAACATTGAATTTGTGCTCACCATTGGTATCGTTTACTAAAGTAGTATTTTTTAAGTTGATTAACATGTATTGGGTTGAGACCCTTTCTTTTTTTCTGTCTCTGCGTCCCTCTCTGAAACTTGCTTTATAATTTGATTTTCGTATTGAAACGCATTGTGGTGTAGGTGGCAGCAATCAAAATGCCGATGGCCTCCTGAGTGTTTACAGTTTCTTTTCTCAGTCTTTTAAGTCATTCTAAAGAGATTTAAAAGCAAACCAACTGATCTGTCCTGTTTACATATGAAAGAACTTGGGTAAAGTGGTCTCTGTGTGGGCACGGGTGCAGGAAGGAGTGGTGTGGGGAGCCGGCTGCGCTGTGCACAGCACGCGTGTCCTCGGTTTACACAGTGGGGTTTGCTGATCCACTTTCTGTGCTTCCTTTTAAGTGATGCTTATCACTCAAATATGCTTCTGAGCTTTCTTGGGTTTTTGTTTTTCGATTGATGTGTTAAGCAGCAGCACTTTGCTCCTTGCCTTCCCATTTACTGGTGTGTGTGGGAGCAGCAGTCTAGCGAGCCTTCCAGCCTGAAAGGGACCGAATGCCCCTTGAGAACTTGTTCAGCATATTTGCATCTCTGCATCCTACAGCATGTGTGTAGAAGCATATTTTACACCTACTGCTAATTTTATTGTGTTTGTTTTTCTGATTTATTTTGTAGTTAGTTTTTGCTATTTATTAAGAACAAAATGTCAAAAAAATTATGACTATTCTTGGCTGACTTACCACTGTTAAAAATGACAAAAAAAGCTAAATTTCTAAATTCAATGCAAATCTTTGTTAGCTCACTCTAGGAGATTTATTAAGCGAAACAATGAAGAAATAAGTGGGAGATAGTTACTTTGTGCACGTTTTTCTTTAAATGATTTTTAACCGTGGGAAGGCATATTATTCTTTTTGCTGTATTTATTGATGCAAGGAACACTGCAACATCTTTATTTTTAGATGTAGTTGTAGTCTACTTTGATGTAGGTAGATTTAAAATAGAACATTAAGAGGTATTAGATATTTCTTAATGTTTTCATAGAGTTCAATAAGTGTAATGGCAATGTTACCTCGAAAGCCAAATACTATTTTATCCTTGATTTCACAATGGGACCTTTTGGCTAATCCATGAAACCAAGCTCAGAAAAGCTTTAACTCCTATTTGTGTGTGTGTGTGTATGCTGCTTCTTAAAGATAATTATTTTCCTAAATTATTATAATGACTTTGATTTGTAATCAGCTAAGGCTTAAGGTATAGTTTGCTTATCTTTTACGTTGGTTTCTGTCCTTCTTTTCTTTTTCTTATTTAGTTCAGACCTAGAGCCAGCACAAGGTCTCAGAGTGAGTCTGATTTGTTATGAAACATTGTGCTACATGACTAGCCATATTGATACTTTCGGAAGTTGACTGTTTCTGTTCCTTAGCATGTGCAGAACAGTGACTGCTGCACACTGTGTTGGGTGGACAGTACCACCCTAGGATCGCTTGCCATAACAAGTTCCAAACTGAACTTTAGTCTTGCTTCACATTGGTGTATGGGTGTAACATTCTTTTTTAAACTTTCTCTCTTAACAGTATAGTCTTTGGCTTTTTTCTTTTTTTTTTTTTTTTTAGTAATGAGCCACATTCTTCACTTGATAGAACTCAAGATTTGTCCTTAGCCAGCCAATTATCATGGTAGTACTCACATTCTAACTCTGTAATGTTCTCATAATGTATCTGTCTGTGCAATATATAAGCTGTGAGTGAATTCATAGCTTTTTGGTTTAATTGTACATTATTGTATGTGTATATCTGTATATATATATCTGTGTATATATCTATGAGGACCAAAATCCTTAGCTTGCTTACACTGTTGCTAGTGTAAAGATTATTACACTTAATTTTACGGGGCACAAATTATGGAATTACTTCATAATTCATGGTAACATATTTCCATAAGTTATTGCATTAATATACAATTACCATTTAATTATGAAGTTTATAAGTATTGACAGAAGTTACAGTGAATTGCTAAAACCACAATTTATATGGTAATTGTATTTTGGATTGTACAGTTAATCAAAATATGCATGTCATTGTGACACTTGATGTGTTAAAACATGGTAGGTAATCATATTTCTGGGCCCTGTAAAATAGTGTTACTATAATATCTGTTTTGCCTCCTGCCTTGTTTACATTAAACAAAGGATATTTGGTACATTTTTCTATTGAACATTGTATAGGTTACTGACAGTGTTATGATGGCCTGGAATTCTAGGTCGGTCATCTCTGAAGAAACTCTTCAGATGGTGATTGTGTACCTACTATCTCTTCAATGGAGGTTGTAATCAAATTTTTGTGCTAACAATGCATGCAGGACTAAGAGGGATAATTAAAAATAAATAATGTAATATAAACAAAA EMBV3_07711 CTGCCGGGCTGGCCCCAGTCCCACCTCTGTTTATCTGTACTACAACCTGTAAATAACATT Gene BVV0102_066744 + 0 NULL GK000028.2:27599753-27613183 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09216 GGAGGCAGGAGTCATCCCCCTAAGTCGTTCTGCTGCTGGTTGAAATACAGCTTTTAGAGT Gene BVT0102_099211 + 0 NULL GK000013.2:82804449-84024135 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044240 1 XLOC_026156 NonCoding TCONS_00044240 XLOC_026156 NonCoding NonCoding - 13:83302086-83323998 - TSS32560 557 2 TCONS_00044240_1 56 2 0.974670256948565 0.000366402034577927 1.80402713207634e-05 0.000116298014314971 0 0 0.000141283778389032 0 0 0 0 0 0 0 0 0 0 0 0 0.000566464090994818 0.00234980961422687 0.000937424633595792 0 0 0 3.73168495449494e-05 0.00140403328596994 0.000136748500321041 0 0 0 0 noncoding 0 0 0 0 -0.412710766968343 0.015214343512147 0.0239206072266614 0.693448438860897 AGATACTGTTTTTGTGTCATCTGACTTCCACTATGGCCATAGAAAAGTCAGCTGTGAATCTCATCAACCTTGTTCTGCAGACACTGCTCCAGCTGAGGATGTGCTGGGTCAGCCGACACCCATGCGCGCAGCACACGGAGTGCGATCCAGGAAAAATAACCCTCTGGATGCCCCATTCACAGTGCGGAGCAGGAGCCTGCTAGAAGAACGAGGAGGCAGGAGTCATCCCCCTAAGTCGTTCTGCTGCTGGTTGAAATACAGCTTTTAGAGTGCTGAGAAGGGAAGGGCCGTTGAGTTAAACAGGAGGGGCAGATTCACAAATGGTAAACTTGGGGATCTGAAGACCCGAACAGACTCCAGTGTCACGGCGCGTCCATCCCGCCCCCACCAGGAGCACTGCGCATGCCTCACCACCGCTCTGCACAAGGCGTCAGTCTCGCTCCATTTCACAGACGGCAAAACTAAGGCCAGAAGGTGCAAAGCGCTGTGTTCCTCAGCCTGTAAGACACCCTATGCAGGGAAAAGGGCTCTTCTTCGAAAAAATAATATTAAAATCC TCONS_00044215 s 3' 497639 TCONS_00044215 s 3' 497639 EMBV3_29736 TCATTTTGGCCACCCTGGCCCTGGAGCTGATCTGTTCCCTGACATGCCTGCTTGTGTACA Gene GeneID:613396|TMEM192:XM_002694306:11_cdna UTR3_Alt 3 NULL GeneID:613396 17 GENE TMEM192 NULL transmembrane protein 192 EMBV3_26158 GTAGGCGAGGCCCACAAGGTGCCTGCAAGTTATTTTTCTTCTATGAGTCGGATTTCCCCC Gene GeneID:505723|LARP4B:XM_002692196:97_cdna Constitutive 0 NULL GeneID:505723 13 GENE LARP4B LARP5 La ribonucleoprotein domain family, member 4B EMBV3_16098 CAACTCTTACACTCTCACAGGGAGAATGAATTGTGTGCTGGCCACATACGGAAGTATTGC Gene GeneID:100294880|LOC100294880:XM_002685564:42_cdna Constitutive 0 NULL GeneID:100294880 2 GENE LOC100294880 NULL similar to upregulated during skeletal muscle growth 5 EMBV3_17748 CTTTTCCGGGAGGCTTATGCTGCCATCGAGACTTACCATCAGACCCCACCACCCACCTTC Variant GeneID:506085|ZDHHC16:NM_001024482:87_cdna 698^745 2 EMBV3_22595 GeneID:506085 26 GENE ZDHHC16 MGC137909 zinc finger, DHHC-type containing 16 EMBV3_07288 AAGGGCAAAGGACCCTGCTCCCTGGACTCACAGATTTTCTAATGCTTGGGCAGGTGGTTA Gene GeneID:537277|SCN8A:XM_002687259:115_cdna Constitutive 0 NULL GeneID:537277 5 GENE SCN8A NULL sodium channel, voltage gated, type VIII, alpha subunit EMBV3_31448 CCTGGATGCTGATCTGTCTGGTTTTTATATCCTGTTTCCCCTGCTGTTTGACTGCGGCTG Gene GeneID:535385|UNC45B:XM_002695630:41_cdna Constitutive 0 NULL GeneID:535385 19 GENE UNC45B NULL unc-45 homolog B (C. elegans) EMBV3_20399 GAGCCCACGCCAGTGTTATTTGTTTGCAGCATCCCTCCCCACAGCGCGACTGAACAAGTA Gene BVV0102_068410 + 0 NULL GK000015.2:57477472-57913543 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17132 AAAGAAGGGCAAGCTCTCCTACAAGGACCAGCGCGATTACGAGTTGCTGCCCCAAAAGAT Gene GeneID:100299182|LOC100299182:XM_002683882:3_cdna Constitutive 0 NULL GeneID:100299182 Un GENE LOC100299182 NULL similar to ABC transporter, class F family member (abcf-1) EMBV3_20071 CCCTGCTAGATTTGGTGGGTTCCCATAGTCCCAGGTATCCTTACCCTTGGCTCTACATTT Gene GeneID:506707|LOC506707:XM_002693872:141_cdna Constitutive 2 NULL GeneID:506707 16 GENE LOC506707 NULL similar to complement component 4 binding protein, alpha chain EMBV3_14889 AAGAAGCGTCTGGAAACCTACTACAAGGCCACAGAGCCCGTCATCGCCTTCTACGAGAAA Gene GeneID:280715|AK1:NM_001013582:458_cdna Constitutive 0 NULL GeneID:280715 11 GENE AK1 MGC140285 adenylate kinase 1 EMBV3_02048 CATGGCCGAGGAAGGCATTGCTGCTGGAGGTGTAATGGACGTTAATACTGCTCTGCAAGA Gene GeneID:326582|RPS12:NM_001014387:2_cdna Constitutive 0 NULL GeneID:326582 9 GENE RPS12 NULL ribosomal protein S12 EMBV3_02308 ATCGCCGGGTGTCCAAGGGCTCGCGTTCGTGCTTCTCAGGAAAACAGACTTCAAAATCCA Variant GeneID:282388|TXNRD1:NM_174625:914_cdna 87^181 1 EMBV3_26680 GeneID:282388 5 GENE TXNRD1 NULL thioredoxin reductase 1 EMBV3_39708 CGCAGACGGGCTTCCGGGCGTACTCAAAGAAAATAGGTAACAATGCGTTTCGCGGTTTCT Gene BVT0102_425418 + 0 NULL GK000001.2:1687491-1776498 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00002870 1 XLOC_000709 Coding TCONS_00002870 XLOC_000709 Coding Coding OLIG1 1:1775223-1777299 = TSS1464 2076 2 TCONS_00002870_1 266 1 0 0.00285090387841696 0.00104066089724294 0.00327188397001919 0.00230804646904019 0.00223137016169929 0.00130435291264752 0.002688313002401 0.00207699571358153 0.00245141337519737 7.13495879037566e-05 0.00018856007016171 0.000256636188010339 0.000993744103360541 0.00110122291190476 0.000703936091537936 3.81670574369661e-05 7.99725237469984e-06 0 0.00293261992011844 0.00341384564327378 0.00107332224707162 0 7.9543718813209e-05 0 0.0021926823825391 0.00323766084954423 0.00138294037023866 3.70141688037035e-05 4.67688492300099e-06 2.89607314243872e-05 NM_001206761.1 OLIG1 Bos taurus oligodendrocyte transcription factor 1 (OLIG1), mRNA. 0.0 3745 100.00 0.999518304431599 NM_138983.2 OLIG1 Homo sapiens oligodendrocyte transcription factor 1 (OLIG1), mRNA. 0.0 1279 72.78 0.994701348747592 TCONS_00002870_1 sp|Q9JKN5|OLIG1_MOUSE OLIG1_MOUSE Oligodendrocyte transcription factor 1; 5e-123 356 85.07 0.996240601503759 1 coding 0 0 0 0 -0.0546145996314663 0.639862491322571 0.000407246277429302 0.993810406710599 ATGTATTATGCGGTTTCCCAGGCGCGCGTGAACGCGGCCCCCGCGAGCATGCTGCGGCCGCCGAGGCCGGGAGACGTGCCGGTCGGGGCCTCCCTCTACGAGCTGGTGGGCTACCGGCAGCCGCCCTCCTCGTCCTCTTCTTCCTCCCCGACGGGGGCCGCGCTCCTCCCCAAGGCTGCGCGCGAGAAGCCGGAGGCGCCCGCCGACACGCCGGGCACGGGACCCGGGACTGGGGCGCACGCGGGCGGCGGGCCCCGGGCCGATGCCAAAGAGGAGCAGCAACAGCAGCTGCGGCGCAAGATCAACAGCAGAGAGAGGAAGCGGATGCACGACCTGAACCTGGCCATGGACGCGCTGCGCGAGGTCATCCTGCCCTACTCGGCGGCGCACTGCCAGGGCGCTCCAGGCCGCAAGCTCTCCAAGATCGCCACGCTGCTGCTAGCCCGCAACTACATCCTGCTGCTGGGCAGCTCGCTTCAGGAGCTGCGCCGCGCGCTCGGCGAGGGCGCGGGGCCTGCCGCGCCGCGCCTGCTGCTGGCCGGCCTGCCGCTGCTCGCCGCCGCGCCCGGCTCGGTGCTGCTGGCGCCCGGCGCCGTGGGGCCGCCCGATGCGCTGCGCCCGGCCAAGTACCTGTCGCTGGCGCTCGAGGAGCCGCCGTGCGGCCAGTTCGCGCTCCCCGGCGGCGGTCCGGGCGGCGGCGCGGGCGGCCCTGGCCTCTGCACCTGCGCCGTCTGCAAGTTCCCGCACCTGGTCCCGGCCGGCCTTGGCTTGGCCGCTGTGCCGGCGCAGTTCTCCAAGTGAGGGCCGGCTCGGGCGCCACCTCGGCCCGGCCTCCCGCCGCCCAAGCCGAGCAGAGCCAGGAGGGCACTGCGGACCTCCTCGCCCAGAGACAGGGACTGCTGGGCGTCCCCTTCCCCGCCCCCATCCCGGGGAAATTAAAGTGACCGGAGCGGATGTTCGACAGAGCGTCGGGGCTCTTTAGGGTTCTGGGTGGCTTCCAGCTGCTTTGCGCTCACGTGCGCGCTCTCACCTTCACCCCGCGCCCATGTCTCACGGTTCCTGGAGTCGTGCGTTTTGCAAGAGCGATGCGGACTTTAGGGCGCCGGGCTAGCCCGGGTGCGGCGGTGGGCCTACACCTGCCGAGCCAGGGAACCAAGGGGCTGCTCTCGGAGGGCGGGGGTCTGGGGGTAGACTTGGAGGTGTTTCCTTCTCTTCAGCCAGAGGTCACAGGCGCCCTTGTTCACCAGCAGCCAGTCCCGATTAGAGGAGGCTGGCTGACCCTTGGGAAGCCGAGAAAGACCACGCTGTCAGTGCAGACGGCCTCGCGCATAACAGACGGACAGACAGACCCTCGGCGGCCAGGCGGTTGGCATCGCGGTACCGCGGGAGGGGCGGTGACAATTCCCAGGTCGATGAGTGTGCTGGATCGGAAAGCCCGCTTTCATACCCCGTCTATGAGAGTGCAGTTTTTTGAGAATCGCAGAACCGGATGTTTTGTCGCGATGATGCGCTCTTAAATCTGAAATCTTCTGAGAAGGGCGGTTTGGACCTCGAGATTCCTCCTTTTGTCTCCTCTTCCCGCGGGGGTAGCGTAGGCAACATTTGAGCTTGCTTAAAAACAACCACCTTTTCCCCGCAGACGGGCTTCCGGGCGTACTCAAAGAAAATAGGTAACAATGCGTTTCGCGGTTTCTGGCTTGGCAGAAGGCAAGATCTCTAATTAACGTTCTGCCTCGTTAAACAGGGAGGGGGACCAGGGACCCCGCTGCGGTGGCCACGGCGGGGTGGCGTCTTCTGCGTGGTCCCTTCGCGTTCGGGGGTCTTGGACCAGCGCGTGGGGCAGGTCTTCTGGCCGCTTCGCGATGGAAAAACTACATTGGTTTGTTATAGACGTTAGCAAATTACTTCATCCAAGATGACTTCATGATCTTTCAGCAGCTTGCTTTGGATTTTAAGGTTTCGGGGTTGTGGATAGCAGCCGAATTTAACTGGCATTTCCTTTTTTTTTTTTCTCTCTCTAACTTTGTTTCCCTGCGCTGTGAAGAATCAACAAAATAAACATGTAAGGGCCTTACA EMBV3_42375 CGCCGGAGACCTGTGGAAGCTCTGGGGCTTACTGAAGAAACCATGTGACTGTCACGTGAT Gene GeneID:514652|ISCA1:NM_001034470:5_cdna Constitutive 2 NULL GeneID:514652 8 GENE ISCA1 MGC127704 iron-sulfur cluster assembly 1 homolog (S. cerevisiae) EMBV3_01578 CTGCGGGTTTGATCCTGGCTGGGGAGCCAAAATCTCACATGCCGCGTGGCCAAAAATAAA Gene BVT0102_016484 + 0 NULL GK000003.2:103937069-103983014 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174421 TCONS_00174420 1 XLOC_104614 Coding TCONS_00174421 XLOC_104614 Coding Coding ZNF691 3:103980070-103988466 j TSS129456 4530 1 TCONS_00174421_3 282 0.134216335540839 2 0.460631328171531 0.00163058482567671 0.00104238771002228 0.00184392409748802 0.00109343058080657 0.00135529515350881 0.000562239207588526 0.000217225650791352 0.000122307497077644 0.000344060786128623 6.90759831513411e-05 6.62395388005294e-05 6.91046231249039e-05 9.84620306115623e-05 0.000380519596848593 0.000291402051719114 0.000961584801256361 0.000169506430356778 2.7056358782013e-07 6.67185317285115e-08 0.00184243954556171 0.000798514267786277 0.000187790739074857 0.000458257844288738 0.00157628953068751 0.00033282243368614 0.00239672459281603 0.00123892778625341 0.000295585074522683 0.000177251660091313 0.000547423780572501 XM_005204773.1 ZNF691 PREDICTED: Bos taurus zinc finger protein 691 (ZNF691), transcript 0.0 5065 100.00 0.619646799116998 NM_015911.3 ZNF691 Homo sapiens zinc finger protein 691 (ZNF691), transcript variant 0.0 1285 78.05 0.343046357615894 TCONS_00174421_3 sp|Q17QR7|ZN691_BOVIN ZN691_BOVIN Zinc finger protein 691; 0.0 575 99.65 0.99645390070922 6 coding 1 0 1 1 -2.85798300321729 0.0309756273665258 -0.107244901186858 0.27899153633983 CTCAGGAACCAATCCTGAAGAGGTAGGGCGGATCCTTTCCGGGTTCCGGTTCCGGCTCCGCCCCCCGGCTCAGAGAGGCGGTACTGTTCCTGACCGCGAGACGCTGGAGCTAGGGTTCAGAGATGGGCAGTGAGAAGGAGCAGAGCCCAGAACAGCACCTACCCGAGGAAGGGGAACGGGGTAATAAGCCCTGGAGAGTGGATGACTCCAAGGTACCGGATGGGGAAAAAGAGCCTGGGCAAGCAAACCCGTCGGAGGCGCCACAAGGGCCCAGTCCAGAAGAGCCCACGCAGGAAGTCGCTGTCTCTGCTGCAGAGCCGGAGGACCTCTCTGCTCATCGGAGGCCCGAGGTGGATGAGAAGCCCTTTGTATGTGTCCAGTGTGGCAAAACCTTCAACAACACCTCCAACCTGAGGACGCACCAGCGCATCCACACGGGCGAGAAGCCTTACCAGTGTTCCGAGTGCGGTAAGAGCTTCTCCAGAAGCTCCAACCGGATCCGGCACGAGCGCATCCACCTGGAGGAGAAGCACTACAAGTGCCCCAACTGCGAGCAGAGCTTCCGGCGGCACGCGGACCTCACCACGCACCAGCAGGACCACCTGGGCCGGCGGCCCTTCCGCTGCGACCTCTGTGGCAAGAGCTTCGGCCAGAGCTCGGCGCTGGCGGTGCACTACCGGACCCACCTGGAGCCCGCGCCCTACATCTGCTGCGAGTGCGGGAAGAGCTTCAGCAACAGCTCCAGCTTCGGCGTGCACCACCGCACCCACACGGGCGAGCGGCCCTACGAGTGCACCGAGTGCGGGCGGACCTTCAGCGACATCTCCAACTTCGGGGCGCACCAGCGGACCCACAGGGGCGAGAAGCCCTACCGGTGCACCGCGTGCGGGAAGCATTTCTCCCGCAGCTCCAATCTCATCCGCCACCAGAAAACACACCGGGGAGAGCAGGCCGGGAGAGAGTCCAGCTGAAGAGGCCGAGGGAGCGCGGACAGAGCAAGGGGCCCCAGCCTACGTAGAAAGACCTTTAGGATCCGCTGCTGCTCCATTGACCTCAAGCCCTTCTCCCACTTTGGAGACGGGTTTTCTGCTGCCTCTGAAGCCAGGATCTCCAGGAAGTCAGAGAAGGGACTCTGAGTAAAAATATTTACATTTTTCCAGGCCAGTTTCTTGTGGTAGATAGTCAGAGGACTCCATCTTAGTTTCATCTCCTTGGGGTGAAAGAGAAATAGGGTAGGTTTAGTACTTGCTTATATCATTAGGGTGACCTTCTCCTGGCCTTTAAGGAAGTGCCTGTGAGATAAGCATCGCTGTCTGGACGGTCTCTGTATTGTGTATGGACTGCTTGAGCTTAGGGCGCACTGCAGGGGTCCACTAATTCCACCCACTGTGCCTCAGCTGGACAGGGAGGAAGTGGCTTCCCAGGCCTGGAGAAGAGGTCTCAGGTCCTACTTTAGGAATGAAAGGGAAACCCTCAAGGAACCTTGATCCAGGGACCTTCACATTCCCTCATGTTTGTGACTTGTCACCCCCAGCCCAGGGTGCATCTGTTTCTCCAGGATTAGCAGTAAAACCCTTTAATGAAAAGGACCTGTGTACTTATTTGGGGGCATCAAAGAGGTGGAGAGATGGTCACACGGCCCCCAGTCTGGAAGGGAGCTGAATTTCAAGAAAGAACAGGTGACTGCTCTGAAAAGCAAAAGGAAGCAGCCGACTGAGGTCTGTGAGGAGGAAGGGGAGAGAGAGGGAAGTAATACTAATTGAGCATCTACTGTGTGCCCTCAATGCTACAGGTCACATTCCCATTCTTTACTTAGTTTTGCAGCAGCCTGCAAGGGAGTATGTGGAGGAGACAAGTGAGGAAAGGTGAAATCGCTTGCTGTGAAGTCACATGGGTATGTTGATAGAGCCAGGGTTCAGACCTGGGTCTCCCTTGTTTCTGAGCTGAGGCTCTTTGACTACATTCACCTTGTTGGCTTCTGAAGGAGGAGCCACTTAGGGAGCTGGCCTGGGACCAGGTGATTTCCTGGAAGTGGGAGCTGGCGCGTGGCCTCTTGAGACAGTCCTGGACCCTTTGCTCTGGGACGTCAGTGCCAAGCATGAGAACCTTTTCAGCTTTAGATTGATAATTGATTGACACTATTCTGTGCCTAGGAAATATGACAGGAACTTGGAGTAGGGGCTGAGGGGTGGGACAAGATGAACCTAGAGAGAGTCTTTGCCCTTAGCAGCAGTTTAGTTCCTAAGGTTGGGATAGCTTGGTAGAGGTCAGGCCTGGCTTCCTGCCCTTCTGAAGGCCTGTCTCCATGTGGCAAGTTTTCAGTGTTTTCTGCATTAAAGTTTATAGAGTTCACCCAGATTTCCTCCAACAAATAGAAAAGACCACCCTCCCCCAACCCCGCCTCTGGCCACTCTGGGGTTCTGTTCTTCCAGGGTGAGAGGCCCTCATCTGTCACCAGCTGGCAGAATGACTGGCACAGCTGATGACCTGACCTACTGCAAAGGGATCCTGCCACCCACCCAGGAAGGGATGTGCCTTTATTTTTTCTAACCATAAAACATGACTTCCAAACAATTCCCTGATATTTGTAGGGTCCTTTTCAGTTTACAAAGGACTTTTATTTCATATACATTTTCCCGCTCCTTGAAAATCTTCATACAAAGTATTTTAAACATATAGTCACCCAACTTGTATGTATATCTTGCTCCCTAATAATAGAAGTTGCCAGGGACTTCCTGGCTGTACAGTGGCTTAAGACTGCTTCCACTGCAGGGGCTGCGGGTTTGATCCTGGCTGGGGAGCCAAAATCTCACATGCCGCGTGGCCAAAAATAAAACTTAAGAAGTTGCCATCTAACACCTACTGAGTGCCAGTTATTTCTGATTTGCATGACTAATCTGCAAAGTAGCAATATCCCCATTTTGAAGATAAGGAAATTCTGAGGGGTTAAATGACCTGACTTAATGGCTGAGCTGGGATTCCAGTTAGGCCAGCTCTTCGTTTTTGCTCATTACCAAGCTAGGTCTGCTGGTGGTCTTTCAGTCTGGGGAGCTTGGTAACATTAACCTTCCAGACCCAGAGCCTTAGTGACAACTGCTGTGACTTGGAGTCTTGCCAGTAAGACCTAGGACCTGCTTTGAGCTTGCTGGCCCGTTTCATTTACCCTTTTCTGACAATTGCATAGGCTATGTTTTTGGTCTTGGTCCAGGCTATTGAGTTCTGATTAGTCCATTTATTCACTCTGATTTCTTTTTTTGCTAACTTCCTTTTCTTCATTCCTTTTTCCTCCTCCCTTTCCCTTCCCCTTCTTTCCTCCCTCCCCACTCTTCCTCTCTCTTCCTCCTAGTTACTAGGAATACTGACAGTGAAGATATGGCTTCTGTATTCTCTAGTGTGGGGTGGCTGCTAGGTTTCAACAGCAGGCAAACCTGGAAGGGTGGGGCTCCCATCAACTCCTGGCACTTGATCCTGGTGTGGTGACCACCCACGGCCTCCCTGCCCCTGGACTTCCCATCAGCCTGCATGCAATTCAGTTCCATCCACCAACATTTATGAAGCAGCTATTACGCGTCAGGAAGCAGGGAATTCTCCCTGCCTCACCTAAGGGGGTCCTAACTGGATGCCTGAGAGGGTCTGCAGCAGGGAAGGGATGTTGTGGGTAGGTGTGGAGAAGGGAAAAGCTGAGCACGCATAGCCTATGTGCAGGCCCTCTCCCCTCAGCACTGGAGAACCTTAACCCCTGAACTCTCTATGATAGGAAAGATCTAAGGGACATCAACACAGCCATAGACAGAGCTCCTGGGTCCTGACTTCTGTTGGGATGGACAGTCACCCCTGGTCTCCTTATGCTCTGAAAGTTCTGGGTTCCTTCTGCTATGAGATCCCAGATGAAAGCAGAGGCCCACATGTAACTTGCCACCTACCATCCAGTACTCCTTGGAATCCAGGCATTTTCCCAGGCTCTAGTCCACAGAGAGACGTCATCCCATTAGGATTTGGGTAACAATACTTCTTTCCCATTCAGTCTCACAAAAACCATAATGCAGGCAAATTACAGGATTGCTTTTGATGGAGCCCAGAAGAGAGGCCTGGAACCAGCCCTACACAGGTTTGGGTACTGGGAAATGGTGATTGTAACAGCATTTACTACTGATCCTAATTTTAAGTCTTCATAGTTCTGCGAGGTAATTACTGTTTCCATTTTGCTGACAACGAAATTGAGGTTCAGTTAGATTAAGTAATTTGCCCATTTAAGGTCATGGGGCCCCTAGGTGGCTCACCTGGGATTTTAACCAACCCAGACCCGATAGTAAGGCCTTCTTAATGACATGGTAATTGAGCCTTGCTCCCTGGACCCCCACTCCCTGTCAGGTCCCACTACTCCTTAGAGTGGTCCTATCCCACCCAGAAGGATGTTCTTTCACATCTCTATCATGGTTATTTGGCTTGGCCTAGGAATTGATGTTCCTAGAGAAGATGGGGTGTACTGAGCCAAAGCCAGGCTGCTGAGGGTAAGGTCTGAACAAGAAC EMBV3_02817 CACCTACCCTAACAGTGACCACACAATGTCATAAGTCAACATGGCTAAGGGGTTGCATGC Gene BVT0102_192333 - 1 EMBV3_32557 GK000019.2:13194554-13202621 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02752 GGAGGAGCCAATCCTGGGGATCTAAGGGTGTCACAATCTCTAAGAGCTGCAAAAAATCCG Gene GeneID:100337047|LOC100337047:XM_002697023:446_cdna Constitutive 0 NULL GeneID:100337047 22 GENE LOC100337047 NULL PHD finger protein 7-like EMBV3_41343 GAGCTCCTTCAGATGCTGGGCAGTGGGATGTATTTGGAAGTTTGAAGGTTCTGGAATGCC Gene BVT0102_083728 - 1 EMBV3_33088 GK000011.2:10651850-10676629 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38878 TGGTGCAAAGACGACCAGAACCCTCACTCAAGCAACATCTGTAACATCTCCTGTGACAAG Gene GeneID:281894|LALBA:NM_174378:11_cdna Constitutive 0 NULL GeneID:281894 5 GENE LALBA a-LACTA alfaLA lactalbumin, alpha- EMBV3_26509 TTCACAGATTGCCCGCCACCGCAACTAGCTCCTGCTCCTTAATACTTCTCTGGTCTGCAT Gene GeneID:614882|CCDC115:XM_002696349:43_cdna Constitutive 0 NULL GeneID:614882 20 GENE CCDC115 NULL coiled-coil domain containing 115 EMBV3_28914 TGGATTTCATCAAACTCATCAGTCAGAGGCCTTGTGTTTTGGGCTGGACCTACACCGTGG Gene GeneID:100337054|LOC100337054:XM_002683638:2_cdna Constitutive 0 NULL GeneID:100337054 7 GENE LOC100337054 NULL testicular Metalloprotease-like, Disintegrin-like, Cysteine-rich protein IVb-like EMBV3_03383 TCTCTCTGCCTGCCATTTCAGCCATGAAACATAGGATTCCCTTCAGAGTGACAGAGCATT Gene GeneID:509589|FRMPD4:XM_002700439:22_cdna Constitutive 0 NULL GeneID:509589 X GENE FRMPD4 NULL FERM and PDZ domain containing 4 EMBV3_36906 TTATAGAATCAATCCGCAGGCAAGGTTTGAGGGCAGCCACCCCGCAGCCTATTTGGAGTA Gene GeneID:504437|AURKA:NM_001038028:841_cdna Constitutive 0 NULL GeneID:504437 13 GENE AURKA MGC134472 aurora kinase A EMBV3_13080 GCCGTGGCCAACGCGCAGGAGCTGCTACAGAAGTGCATCGCCATGTGCATGGACCGCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05035 CACTGTAAAGAGTAATCTCATGGTACACCAGCGAACTCACACGGGAGAGAAATCTTACCG Gene GeneID:100137855|ZNF614:XM_002707749:192_cdna Constitutive 0 NULL GeneID:100137855 18 GENE ZNF614 NULL zinc finger protein 614 EMBV3_00968 GGACAGACAAGCAGCTTTCCTAGCCCAGTGTTCTGTCCTTGAAGTGGAAGATAGAGTTCT Gene GeneID:616168|TCAM1:NM_001038211:296_cdna Constitutive 0 NULL GeneID:616168 19 GENE TCAM1 MGC134216 testicular cell adhesion molecule 1 homolog (mouse) EMBV3_34635 TGGGTGTCTTGTGCTGCATCTACAGCTATTTATTGTTACGTCCCGTATCAGACACTGTAG Gene GeneID:533784|CCT5:XM_002696438:68_cdna Constitutive 0 NULL GeneID:533784 20 GENE CCT5 MGC127255 chaperonin containing TCP1, subunit 5 (epsilon) EMBV3_27001 TCCTGCATGGAAACAAGATCTATGTCCTGGGCTCCTGGACCAAGCTGCCCCGCAGCCTGC Variant GeneID:527321|KLHDC8B:NM_001035370:217_cdna 732^956 2 EMBV3_32124 GeneID:527321 22 GENE KLHDC8B MGC142469 kelch domain containing 8B EMBV3_20335 GCGGGCCAGGAGAGATTCAGAAGCATTGCCAAGTCTTACTTCAGAAGAGCAGATGGTGTT Gene GeneID:513223|RASEF:NM_001105362:22_cdna UTR3_Alt 2 NULL GeneID:513223 8 GENE RASEF NULL RAS and EF-hand domain containing EMBV3_34899 GCCACACAGTCTCTGTCACAAGTACTCACGTCTGCTGTTACTATGAAAACAGCCACAGAC Gene GeneID:511940|MAL2:NM_001081719:19_cdna Constitutive 2 NULL GeneID:511940 14 GENE MAL2 MGC151721 mal, T-cell differentiation protein 2 EMBV3_40500 CCTTTTTCTTAAGGCCTCTTTGCACCTCCACGTGCCTTCAGTGCAATCTGACGAGCTGCT Gene GeneID:524868|MED13:XM_002695603:174_cdna UTR3_Alt 2 NULL GeneID:524868 19 GENE MED13 NULL mediator complex subunit 13 EMBV3_08443 CAGATATCAGTGTCTCGCCTGTGATGTGGCCATCGGTGGGAATGAAGCACTTAGCCAACA Gene GeneID:539762|ZFHX4:XM_002692734:203_cdna Constitutive 0 NULL GeneID:539762 14 GENE ZFHX4 NULL zinc finger homeobox 4 EMBV3_00808 CAGCAGCACAAGCAGTGAAGAGAGTGATGAAGAGAATGAGGAACTGAATAAACTGCAGGC Gene GeneID:614029|SFRS12IP1:XM_002696298:44_cdna Constitutive 1 NULL GeneID:614029 20 GENE SFRS12IP1 NULL SFRS12-interacting protein 1 EMBV3_27064 GATGCCATCCGGGAGTATGAGGAGGTAGAAGTGCTCCTTTCTGACAAAGCAAAAGATCGA Gene GeneID:519058|EDEM3:XM_002694246:208_cdna UTR3_Alt 2 NULL GeneID:519058 16 GENE EDEM3 NULL ER degradation enhancer, mannosidase alpha-like 3 EMBV3_14453 AGCACCGGGCTCCTGATGGACTTGGCAGCCAATGAAAAGGCAGTTCACGCAGACTTTTTT Gene GeneID:617407|LOC617407:XM_002686589:50_cdna Constitutive 0 NULL GeneID:617407 3 GENE LOC617407 MGC133657 hypothetical protein LOC617407 EMBV3_05638 ATAGAGACTGCCCTTTCTCGTGACTGAGCCTACACCGACAAGGAGGTGTTCTGTGACTTC Gene BVV0102_143058 + 0 NULL GK000005.2:119985521-119998126 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196737 TCONS_00196738 1 XLOC_118432 NonCoding TCONS_00196738 XLOC_118432 NonCoding NonCoding - 5:119996267-119996965 - TSS146329 698 1 TCONS_00196738_3 67 0.256446991404011 1 0 0 0 0 0 0 0 0 0 0 0.000577679658572751 6.55917706808483e-06 0 8.22132554342937e-06 6.73924456080026e-06 0 0.000151355899709428 0 0 0 0 0 5.7830213035111e-11 0 0 0 0 0 0 1.39098548408726e-05 0 XR_234819.1 LOC101903087 PREDICTED: Bos taurus uncharacterized LOC101903087 (LOC101903087), 0.0 690 100.00 0.545845272206304 0 noncoding 0 0 0 0 -0.0420079436070956 0.733856474778514 -0.063520781096342 0.205054163179629 GCTGAGAAAGATTGAAGACAGGAGGAGAAGGGGACAACAGAGGATGAGATGTTTACACAGCACCACAGACTTGATGGACATGAATCTTTACAAACTCCTGGAGATAGTGAGCAACAGAGGAGCCTGGCGTGTTACAGTCCACGAGGTCACAAAAAGACAGACACAACTTAGCAACTGAACGATAACAACAACAAACATAGAGACTGCCCTTTCTCGTGACTGAGCCTACACCGACAAGGAGGTGTTCTGTGACTTCACTGATCCTTTACTGGGGGACAATTAGGTGATTTCCAGGCTTTCCAAGAGCAAGTACCCTGCTTCGTGAGCTCATGGATGTGTCCCTACAGGCTATATCTGCAGGCATGGGAATTCTGGCTAAAGGTGAGCCCGTGTTTGTACTGACAGGTGGAGCCAAACTGCCCTCCACAAGGCTGATGCACTGTCCGCTGATGCTGGACTTGGTGCCAGGGTTCCTCACCCCTCTGTCCATCCGAGAGGGGACGGTTATCCCATCACGCCCCCACACATTTTGATCGCCTCTGCATCTCTGTGTTCGTGTTTCCTCTTCTGTCTTCCCACCCCAATCTTGCTCATGCTGTGAGGTCATCATAAGTGTCCTGATCACTCTCCCTGCCTCCTTCTGCACAGGCCATGGGAGCTCAACAAACACTAACTGGATGAATAAATTAACAAGTGGT TCONS_00193727 r 3' 140 TCONS_00193727 r 3' 837 EMBV3_29479 ATGGGACATTTGTGATTCTGCTGCCGCTCAGCCTGATCCTTATGGTTTTCGGGGGCATGA Gene GeneID:787012|TMEM114:XM_002697957:665_cdna Constitutive 0 NULL GeneID:787012 25 GENE TMEM114 NULL transmembrane protein 114 EMBV3_02510 AAGCAAGATGTAAGCCTGTCCGTGAATTGCTGGTTGTCAGTCACTTCCCTTCTGTGGAGC Gene GeneID:524684|PCSK6:XM_002696654:245_cdna Constitutive 0 NULL GeneID:524684 21 GENE PCSK6 NULL proprotein convertase subtilisin/kexin type 6 EMBV3_10361 GTTAGAATAGCAGCACGTTTCAGTCCTGGAGAGCAATACAAGCGAGAAGGGACTGTCTGG Gene BVV0102_426159 + 0 NULL GK000006.2:88540289-88642351 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20135 GGGCGCTGCCCAACTGGGCTAGCGCTCCCACCTGCAAAACACATTTTTTAAAAATGAGAA Gene GeneID:516019|SEMA6A:XM_002689001:29_cdna Constitutive 0 NULL GeneID:516019 7 GENE SEMA6A NULL sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A EMBV3_42693 GGCAGCAGGTGTTCTGGTTTGCCGTCAGCATAGCGGTCAATAATGCCTACATTCTGTACA Gene GeneID:616498|LOC616498:XM_002698769:35_cdna Constitutive 0 NULL GeneID:616498 28 GENE LOC616498 NULL similar to PiggyBac transposable element-derived protein 5 EMBV3_13179 AAACCTCTATAGCTGTTTTTGTAGTTTCTCAGTCTTCTGCATTCCTATATCGTCATCCTC Gene GeneID:521943|LOC521943:XM_002685612:263_cdna Constitutive 2 NULL GeneID:521943 2 GENE LOC521943 NULL similar to hCG1788238 EMBV3_29167 GCTTTTGTGCATCTGAGCTCCCCCATCCTGACCTATGGATCATTTCATCAGATTACAGAG Gene BVT0102_144751 + 0 NULL GK000001.2:106731203-106817579 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004756 TCONS_00004753 TCONS_00004758 TCONS_00004754 TCONS_00004755 TCONS_00004752 TCONS_00004757 1 XLOC_001101 Coding TCONS_00004754 XLOC_001101 NonCoding Coding SPTSSB 1:106798108-106888743 x TSS2358 631 1 TCONS_00004754_1 53 4 0.993082066332723 1.89094066615803e-40 0.00210901131809479 0.00137125820171646 0.000523839276813623 0.000752500660482673 0.000363591002460363 0.00111925905144822 0.00109885640839634 0.00185403299483221 2.96320477512036e-05 0 0 0.000212963199465793 3.16039942700704e-05 0.000101078841272743 0 0 0 0.000310388993016632 0.000154867531373438 0.000109167755308076 0 0 0 0.00101282811243569 5.32019164762127e-05 0.000193074353062763 0 0 0 NR_102265.1 LOC101243545 Homo sapiens uncharacterized LOC101243545 (LOC101243545), 4e-29 132 69.00 0.541996830427892 0 noncoding 1 1 1 1 0.421715269705555 0.394168382438478 -0.0448751126433018 0.67234951641021 GGTGAGAAGATGCAACCTTAGAATGCGTCTCAACATGGGCCTCCTGGGAGGCCCTGCCAATGATTGGAGGAACCAAAAAGATAAAACCACATACGGCATTCCCCGTCTTTCACCTTCAAGCCTGAACCATGACATCAAAAGCTTCAGAGAAGTGGAGTATGGGCTCCATCTGGTCACCCTTTGAACCGAGTGCATCATGAGGATTCTGTAGACTCTGGATACCAAGGACCCTGGCAGCAGTGGCGGCCTGAGGGAAGGGAACTGTGGAAACTGGGAGGCGCAGACACAGACTTCCTTTATTTTCACTGCAAAGCTTTTGTGCATCTGAGCTCCCCCATCCTGACCTATGGATCATTTCATCAGATTACAGAGACAAAGCTGCCATACAAAAATATCTACCCAAAGAAAACTTTGTCATTGAAAAAAATGCTTCCAGTGGCTTCTTTCTTTGGAGCAACATCAAAATGTTTATGTATTTAGTTAAAACCCATTTTTAGACTTTTGGTCATGAGCTCTCATGTTTTTTATTTCCCATTGCGTGATTTCTGAAATCCCATCTGGTCAATAAAGTGATTTTTATCTGAACTATTAATTGTAATATATCAAAGTAAATAATAAATGTAAAACATTA TCONS_00001738 r 5' 27436 TCONS_00001739 r 3' 7333 EMBV3_08112 AGTCAAGCGGATCTCCGGTCTTATCTACGAGGAAACCCGTGGGGTGCTGAAGGTGTTTTT Gene GeneID:527388|LOC527388:XM_002697509:214_cdna Constitutive 0 NULL GeneID:527388 23 GENE LOC527388 NULL similar to Histone H4 replacement CG3379-PC EMBV3_15272 TGCTGCTTTGATAGTGACAAGAAGGAAGTGTTGTGTCGAGCTGCACCTGCTATGAGTTGC Gene GeneID:522719|CLCN3:XM_002689446:13_cdna Constitutive 0 NULL GeneID:522719 8 GENE CLCN3 NULL chloride channel 3 EMBV3_17545 AATGACTTGGTTAAAACCTGATGATCTTACCAGCATTCTGCAGGTTGATGAATACTAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14925 TGGTTACAGCTTTTCGCTGACTACATTCAGCTGCAAATGGCGTGGTCTTGGCAACTGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42478 ACTATACAAATGTGCCGGAGAAAGAGCCAGGTGATTTGCATGGGAAGCTAGATGACCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12363 GGCTGACGCAGGAACCCGAGAGCATCCGCAAATGGAACCAGCGCCAGAGTGAACAAGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01083 GCAGCTGCCGTGGCCGCGAGTCGGACGAAGGATGTATCAGGATAAACTGGCTTCTCTCAA Variant GeneID:506646|SUDS3:NM_001098891:75_cdna 275^344 1 EMBV3_18251 GeneID:506646 17 GENE SUDS3 MGC159395 suppressor of defective silencing 3 homolog (S. cerevisiae) EMBV3_03132 GAAGAGTGGGAAGACACCAAAGATGCTAAAGAACAAGGTCACCACCGAAGTAACCACCGC Gene GeneID:781505|LOC781505:XR_083872:11_cdna Constitutive 0 NULL GeneID:781505 16 PSEUDO LOC781505 NULL similar to potassium channel, subfamily T, member 2 EMBV3_32143 GAGCTCCTACTGGGAAGCAGGACTTGAGACAGCCAAGCTATTTATTGCCAAGGAGTTTTT Gene GeneID:539013|CDYL:NM_001102223:229_cdna Constitutive 2 NULL GeneID:539013 23 GENE CDYL MGC148813 chromodomain protein, Y-like EMBV3_35879 AAGAATTCCTCTTTGACTCTGACTGCAGAGGTCACAAAGGAGGGCTTCTGAAGAAATACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11457 CCCAGCTCTTCAGTACACTGTCGTCACTTAGTTTAGCACAGGATAGAAACTCGGGTAACC Gene BVV0102_093988 + 0 NULL GK000001.2:113072587-113387230 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232083 TCONS_00030692 2 XLOC_141569 XLOC_016945 NonCoding TCONS_00030692 XLOC_016945 NonCoding NonCoding - 11:27307073-27307552 - TSS21691 479 1 TCONS_00030692_1 34 0.369519832985386 1 0 5.5868060809516e-05 0.000130688257443542 1.01817252235027e-05 2.3705861395476e-05 7.5277733570961e-05 0.000146876865797368 1.38719991548288e-05 2.30344432974922e-05 4.41495801372459e-05 3.55964851158234e-05 1.05858365363841e-05 1.58767605117036e-05 1.72731652930942e-05 0.00026714101399094 8.70215884316647e-05 0.00206968677146272 0.00207289587646481 0.000738456697488396 5.4060643990906e-06 4.16789203195186e-05 3.5116551268594e-05 0.000237802526643714 0.000414230875993087 0.00080530142092549 8.5859455274109e-06 4.60036489898077e-05 5.69759934283475e-05 7.0493354868441e-05 9.80835620885628e-05 7.01801771417703e-05 XM_005194400.1 FAM217B PREDICTED: Bos taurus family with sequence similarity 217, member B (FAM217B), transcript variant X1, mRNA. 2e-57 226 88.33 0.37160751565762 0 noncoding 0 0 0 0 -1.70767795796122 0.0187036130359615 -0.496660969168083 0.000990531285618173 GAAAATATCTGCCTATGAGAGTCTTGATTGAAGGCAGAGGAGAAGGGGACGACAGAGGCTAAGATGGTTGGATGGCATCACTGATTCGATGGACATGAGTTTGAGCAAGCCCCTGGAGTTGGTGATGGACACGGAAGCCCAGCGTCCTGCAGGCCACGGGGTCCCAAAGAGTCAGACACGACTGAGCCACTGAACTGAACTGAACATACAATCGTTTCTCCAGGTGTTTTGGTTACCCGAGGTTCTATCCTGTGCTAAACTAAGCGACGACAGTGTACTGAAGAGCTGGGTCATTTCCAAATAAATTAAAGTTCTGAAACATTCACGCCTTGAAAGGACCTCCCTTTTACACAGAAACAAAAGAGATTTTTGACTATCCAATAAGAGTGTCTGGCACCATCCTGACATGTGAAACGTAAGAAAGCAATTTGTTTTGTTTTGTTTGGTTCTGATCTTGGGTGTGTGTGTGTGTGTGTGTN TCONS_00027373 . 5' 43375 TCONS_00027373 . 5' 43375 EMBV3_31267 GGAAATACTCAAGATTGCCATGATAAAATTTCTGAGTCTGGTTACCCGTTAGGTTATACA Gene GeneID:510651|LOC510651:NM_001101072:188_cdna Constitutive 0 NULL GeneID:510651 5 GENE LOC510651 NULL hypothetical LOC510651 EMBV3_42152 TTTGCTTCCCATGATTCTACTGTCGGTGATCTATGCCCAGTCAGGAGCCTGCCTATATCC Variant GeneID:506859|ZNF317:XM_002688767:88_cdna 196^315 3 EMBV3_09016 GeneID:506859 7 GENE ZNF317 NULL zinc finger protein 317 EMBV3_23492 TGGAGACCCTGACGGATGCAGAGATGGAGAAGAAGATCCGGGACCAGGACCGGAACACAA Gene GeneID:537412|SMARCB1:NM_001040557:88_cdna Constitutive 1 NULL GeneID:537412 17 GENE SMARCB1 NULL SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 EMBV3_08270 TGACATGTATATTATTCTGAAAGAATCATCAGCCTTCTGCTATGACACCCAAGCCCTCCC Gene GeneID:281615|ALDH1A1:NM_174239:11_cdna Constitutive 1 NULL GeneID:281615 8 GENE ALDH1A1 ALDH1 MGC128391 aldehyde dehydrogenase 1 family, member A1 EMBV3_22012 AAGCAGCAGGAGCGTGGCAGTGCTTCATGTGCAACAACCCTGAGAGAGCAACCGTTATAA Gene GeneID:100337421|LOC100337421:XM_002684961:233_cdna Constitutive 0 NULL GeneID:100337421 1 GENE LOC100337421 NULL VEPH1 protein-like EMBV3_19674 CAAGGTAAAACGGGAAAGGGTCCAGGGTGACCAGGCCCAAGTAATCACTTTGTTAGTATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23823 TCAGTGGTTCTTTTGTGCTTTTCTATTGTGGATGTTCAGTGGGACCAATGCGAACACAGC Gene GeneID:767893|LOC767893:XM_002686651:55_cdna Constitutive 0 NULL GeneID:767893 4 GENE LOC767893 NULL hypothetical protein LOC767893 EMBV3_39471 GAGACTCTTGGACACACAGGATGAAGAAGATTGTACCACTGCTATGCAGACTTCCTGCTC Gene BVV0102_147474 + 0 NULL GK000002.2:78581994-79255848 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102695 1 XLOC_061929 NonCoding TCONS_00102695 XLOC_061929 NonCoding NonCoding - 2:78584974-78587941 - TSS76421 543 1 TCONS_00102695_2 59 2 0.817599460552933 0 0 0 0 0 0 0 0 0 0.000309759080190094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000106134550928425 2.27048170850973e-05 9.72079715060024e-13 XR_139113.2 LOC100849044 PREDICTED: Bos taurus uncharacterized LOC100849044 (LOC100849044), 7e-25 118 79.86 0.25414364640884 0 noncoding 0 0 0 0 CCAAACTATGGTGGAGGTAATGAAGATACCTGGCAACCTCCTTCAAAAGGTCCTTTGCACTCATTGCAGCACTCAGTGACCCCAACACCGCAGGAGGATGCTGCAGGCCCACGCCTCTGCTGGAGACTCTTGGACACACAGGATGAAGAAGATTGTACCACTGCTATGCAGACTTCCTGCTCAGGAGAAGCAAAATGTCAGTGAACACTAGATTCCACTTTTGATGGAAGTACATTAAAAGGAGAGTAAAAAGTGACCCACACAGTTACTTAGTCATGTTTAAACATCCACATTATATTTCATTAACAATGAATTCATAGGTGTTAATAAATTTGCATTTGAATTGTTTATACTTAAAAAGCTGTATGACCTTGGATAAATGGGAAAATTTTTCTTGTTGGAATTTCTTCCGGTGTGAAATAATGAAGTGGTCCATTCTTAATATGACTCAATTAATTATCAAAGTTGAAGAAGTTGAAGTCATATATTTGAGTGTTATAGAATCAACATGTATGCTTGATTGGTTCAAATATATTGTGCATA TCONS_00102694 s 3' 634513 TCONS_00102694 s 3' 634513 EMBV3_07674 AGACCTGCTACCCAGCTGCATGCCAAAGTCTCCAGCCCATCGCAAAAGATCCACACCAGA Gene GeneID:539543|ADRA1D:XM_002692380:282_cdna Constitutive 0 NULL GeneID:539543 13 GENE ADRA1D NULL adrenergic, alpha-1D-, receptor EMBV3_33748 TTTTTGGGTTCCCAGAATTCCTGAGGCTATTTCCCAGGAAGCTTAGCCCGCGGCTCCTCT Gene BVT0102_226113 - 1 EMBV3_30646 GK000019.2:28134583-28147258 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41667 TTGGAGCAAGACATTATACCAAAGCTATTGATAAAGATTGGGAAGATATAAAAAAGATGC Variant GeneID:507149|CDK8:XM_002691843:114_cdna 461^604 3 EMBV3_08915 GeneID:507149 12 GENE CDK8 NULL cyclin-dependent kinase 8 EMBV3_15491 TCTCAAGAGCTCAATCACTTCTTCTGTGATGTCAAGCCCCTCTTGGAGCTGGCCTGCAGT Gene GeneID:540205|LOC540205:XM_002697388:42_cdna Constitutive 0 NULL GeneID:540205 23 GENE LOC540205 NULL similar to olfactory receptor, family 12, subfamily D, member 3 EMBV3_00045 TCCTGGACACCAACAAGGATTGCCAGGTGGATTTTGTGGAGTACATGCGCTTGCTCGCTT Gene GeneID:786230|S100A3:NM_001083530:254_cdna Constitutive 0 NULL GeneID:786230 3 GENE S100A3 MGC139900 S100 calcium binding protein A3 EMBV3_09083 AGCCTGTCATCTCATTTCCTCCACTTCAAGCAATTGGAACATGTGCTGTGTTTCCCCTCC Gene BVV0102_096315 + 0 NULL GK000018.2:51797320-51806284 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35513 CTACGGACAGAGAATTGAGCGGGTGGATTTTAACCGTGAGTCTTGTCCTCTCTGTGATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09281 TTTGTGGACTGCTGGTGCTGGTGTCCTGGGTGATGAGTGCCCTGAATTCCTTAAGCCAAA Gene GeneID:789554|LOC789554:XM_002688689:142_cdna Constitutive 0 NULL GeneID:789554 7 GENE LOC789554 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_17843 CCTTTCTTCTTGTCATCTACGCTCCTCAGCCTGCTTGTCTTCATCACGAACTGGGTCCCT Gene BVT0102_179431 + 0 NULL GK000007.2:79286520-80188409 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214272 TCONS_00214271 TCONS_00214273 TCONS_00214274 TCONS_00214270 1 XLOC_130659 NonCoding TCONS_00214271 XLOC_130659 NonCoding NonCoding - 7:79524405-79711578 - TSS160318 1088 1 TCONS_00214271_1 62 0.329044117647059 3 0.994203192785246 0.000656247033182191 0.000187496161544076 0.000686366966443314 0.000217016384380641 0.000256707979941823 7.64369412035268e-77 0.000613142362643431 0.000834747320052612 0.000140681969719273 0.000119559922767073 4.86276511906498e-11 0 6.05655640927686e-06 0 0 1.04215920531836e-09 5.94651467342491e-12 0 0.00193576510028793 0.000518671704395428 0.000244121073276325 0 0 0 1.43981650318206e-41 0.00106198331733323 0.000334862208216779 0 0 0 XR_228587.1 LOC101908426 PREDICTED: Bos taurus uncharacterized LOC101908426 (LOC101908426), 1e-13 82.4 70.14 0.195772058823529 0 noncoding TTTGCTATCACAAGTTCCTTATAATTGAGTATTGAATGACCTGGAAAGCAGGAGTGGGAGGAACATAAAGTTTTTTACCTATCCTAGGTTGAAAGAATTTAAGGCTATAATGTCTTCAATGATAGAACAGAGTACGTGAACACTTAACAGACATCACCTGTATTTGTTTATGACCTTGTTACTAAAGCAGGTCCTTGAATGCTGTAATGAATAGAAATTGATGAGAGGGTAGATGAGAATTTCAGGCAAGGCTTTACTGGGACTCCTGCTGTAGCACATGGTAGTGAAAACAAGTAACAGATTTCCTTGTTCATTCCCAGAGGGTTATCAGTTCCCAAAATGGGGTGTGGGTAGGGCTAATCCGTGGGGTGGGCCAGAGTGCGGTCTCAGGTGGTCTGTCCACCCCCTTGGTGGCTCTGGGCACGGGTGGAGTGTGCAGTATCCTGCTTCTCCTCCTGCCACCTGAGAAGAGGCTATTGGGCTTTTGGTCTCTTCAGTCCTCAATATTACCAATGCAACATTGCATAAAGTCAGTTCCTTTCTTCTTGTCATCTACGCTCCTCAGCCTGCTTGTCTTCATCACAAACTGGGTCCCTGGAACACTGTCATTAAGGGCTGAGAGGTGAAGATACATTAGATAAGAAAATAGCAGACAGGGACCCTGAAGCACTTTAAGAAACCCCAGTCTGCAGGAAATCCTCATCTTGGCTCCAATCATCAGAAAACCTGTTCTTTACCAAAGGAAATCCTACAGACAGAGGAGCCTGGTATGCTGCAGTCCATGGGATGCAAAGAGTTGGTGGATTCCAAGTTCAAGACAGTAACATAAGAGCCTACTGACCTCATTTTTCATGGATACACCAATTCTAAATGTACACACAAAACAATTCCCTCTCAAAGGAATCCTGAAATTAGCTGAGTGACTCCTACACATCTGGAAGAAGAAAAGCAACTCATCAAAACAGGCAGGAGAGGTGGAGATATAGTCTCATCACAAACCCCACCCCATCCTGGCACAGGATCAGAAGACACAAGATCAGAAGGAGTAAATCCCAGCTTCTCCCTGAATAGTAAAGTGTTTGAACCTA TCONS_00214291 s 5' 1106724 TCONS_00214291 s 5' 1293896 EMBV3_27013 CCCCAGAGCCCCTGTTCCTAAATTACACAAGAATGTATCATGCCGGGAAGCCAGAGACCT Gene GeneID:785713|ATP8B2:XM_002686015:406_cdna Constitutive 0 NULL GeneID:785713 3 GENE ATP8B2 NULL ATPase, class I, type 8B, member 2 EMBV3_10044 CTGGAAAGAATCCCTACAGATGTAATGAGTGTGGCAGGGTCTTTAGGGAAAAGGCAATCC Gene GeneID:100140226|LOC100140226:XM_002707751:27_cdna Constitutive 0 NULL GeneID:100140226 18 GENE LOC100140226 NULL similar to zinc finger protein 813 EMBV3_05580 ATAGAAAACCCTTTTCATCCCAGTTACCCCTGATTGAATGCTCACCTGATGGCAGATGCC Gene BVT0102_052804 + 0 NULL GK000018.2:10939665-10985131 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18130 AGGGGCATTTTGCGACGCTGACTCGGATAACGGCAATGATGATACTTTCATTTTGGAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21614 AACTGCATTCCAGAACGATCTCCCACACAGGAGTTGAAGCCAAATTAAAAAGGAAAGCTT Variant GeneID:504366|SI:NM_001114189:109_cdna 214^331 1 EMBV3_01159 GeneID:504366 1 GENE SI NULL sucrase-isomaltase (alpha-glucosidase) EMBV3_39349 CACGCTCCACAGGACCGTCAAATGATATGAAGAACTTTCACACTGAAGTCTCAGGGCAGG Gene BVT0102_060701 + 0 NULL GK000003.2:16872614-16880768 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175783 1 XLOC_105562 NonCoding TCONS_00175783 XLOC_105562 NonCoding NonCoding - 3:16875562-16876132 - TSS130542 570 2 TCONS_00175783_1 54 1 0 0 0 0 0 2.88724588506204e-06 0 0 0 0 0 0 0 0 0 0 0.000139008101298431 0 0 0 0 0 0 0 0 0.000692848569280825 0 2.05584821308227e-05 0.000505536079915286 0.000102202330188503 0 0 noncoding 0 0 0 0 -0.033821311662331 0.750718730836201 -0.105724028607183 0.156227349318594 GAGTCAGTTTGAGGAGGTTCACTGACCCCCACAGGGCTATGAGACTGGGGGGTGGGGTCACCCTGTCCCTTGGGCCCAGGTCCTTGTGGCACAAGCACAGGAATGTTCGGACGCTCCAGGACATTTCATCTTATTTCTCCCTGAGGTGCAGAACCGGACACGGACCTTCCAGGGGCCAGGGGGTTTCCCAGAGGCCTTTGTAAGGTGAGGGTGGTGATAGTGGGGGACCGAGGCGAGGAGCGAGGGGAGACAGAGAGGAGGGACAGTCCTGCCAGGTCAGAGAGCATCTGCTTCTCTTCCTGCTGCCCCCACTGAGTGGGGGATTTTGCGTGGGGTTGCTGAGTTAGACGCGGGGCCTTCAGCTCTCACACGCTCCACAGGACCGTCAAATGATATGAAGAACTTTCACACTGAAGTCTCAGGGCAGGAATCTTCCAGATCAAAAAAAAAAAAAAATCAAAGCCCAAACAAGGTAAAGGACCTCAAGGTGGAGAGAGGAGGGTGGCGGAGCTCAGAGTGAGGGCTCAGTGAAGAGGGCTTCTCATGACAGTCCTCCAGCCCCAAAGCACC TCONS_00168799 TCONS_00168801 . 3' 2941 TCONS_00168799 TCONS_00168801 . 3' 3510 EMBV3_27797 GCGCAGGTGAAGGCCTCGGGAAATGACTGTGAAAGAGCGAATGAATTAATGAGTGAAGAT Gene BVV0101_018137 + 1 EMBV3_40810 GK000015.2:38166440-38336926 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061133 1 XLOC_036933 NonCoding TCONS_00061133 XLOC_036933 NonCoding NonCoding - 15:38201177-38247796 - TSS45594 2541 1 TCONS_00061133_9 150 0.314443132624951 5 0.945600411858081 0.00188780700263267 0.000831185999820136 0.00120584633433517 0.000342062749411469 0.000654262302657352 0.000607204951890537 0.000621984416820928 0.000543524438378047 0.00058447482767508 1.37493871652181e-05 1.03302410543932e-10 1.81010769838416e-10 6.15008967663042e-05 0.000301813654004559 0.000101510688766324 0 0 0 0.00146403983555019 0.00112951929925602 0.000154979577361272 0 0 0 0.00250845563901231 0.000782799744695881 0.00128682443961312 0 2.28026054472185e-10 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 838 93.38 0.219205037386856 0 noncoding 0 0 0 0 -0.0410747152976473 0.781093178221892 -0.0290218115247239 0.567216079073226 CCTTTGTTGGCAAAGTAATGTCTCTGCTTTTCAATATGCTATCTAGGTTGGTTATAACCTTCCTACCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAGGCACCATCTGCAGTGATTTTGGAGCCCCAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTCCCATGAAGTGATGGGACCGGATGCCATGATCTTCATTTTCTGAATGTTGAGGTTTAAGCCAACTTATTCACTCTCCTCTTTCACTTTCATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTCCGGGCAATATTGATTCCAGCTTGTGTTTCTTCCAGCCCAGTGCTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTAGCGCATTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGATTTCTCAAGAGGCAGGTCAGATGGTCTGGTATTCCATAAAACTGGTTACTTATATCAAATTCTTATCCATTGTACCAGATCTGCCTATGCCAGAAGACAGTTTCCAACACATTTATAATTTGTAATCTATTATGAGACTTAAAATACCCACTTTCCCATAGTAAATACAGAATTCCTTTCAGTTCAAATATCTATGTATGAAAAACAATTTTCTATTCTGCATAACACCATTTCACATAACTGGTTGTAAAACACTGTGTACTTTGTAGTCCTAATAAATTGCTCTGTAATTAATAACCAAGAACATTTGAGTAGCACTTAACTGTGTTCAGTTACTATTACCACCATTATGCATATCAGGAAAAATTAAGATTCAGACAAGTAAAGGTCAAGTTTTGTCTGATGAAACAGGACTCAGCCTCTGTTCCTGTGCTTTCACAACTTCTGATTTCTCTGTAATACTGATGATGCTTCATACAAACACACCAGAGATCAAATATGAAAAATCAAAACCATGGAAATACACTCGAGAACTGGAGGATGGAAAACAAAATATAAGAATTATATATATTTAAGTCCAGCTTCCCTGTTGCGATATAAACCATTATTGAACTGCAGAAACCTAGAATAATTCTTGTAAAAACCTGTTTAAATACGGATTCAAGCCCAAACCTAAAACACCACAATTGCCAAATAGCTCTGCGGTACTTTTCCTTCAAAACACATAAAATTTGTGGTTGATCGTCAGATTAATTTTTCTTCTTCTCTCACTAGACTGCACCTAAAATCGGCCTGTGACTGCTTTCTTCACCTCTTCATCCCCAGCACCTGGTACAGTCTAGCTGGTAGTTTCTTTTAACAGAATGGATTCAAAAGAAAACAAGTGAGCTGCATCAGGGAATGTTCTGGAAACTTCTGCTTTCTCGAGGTCTGGACACTTTTCCAAAGGCAAGCTAGCATTCTGGCCTTTCCCCTGCTTGTTCGCAGCTGTGTGGCGGCCTGCAAGTCACTCAGCATGTCTGTACAGCTGTTTCCTCCTCAGTTTAATGGGAAGGACCGGAGGACCTGCCCCCTGACGTCTGCACTGCAAGGGAGGTTGGCCCTCCCGCCGGCGAAGGCTCCGAGTTTGCTGCGGGGACTCTCCGGTCTCCTGGCAGACAGGATAGCAGTGGTACTCCCTCACTGATCTTCACTCATTAATTCATTCGCTCTTTCACAGTCATTTCCCGAGGCCTTCACCTGCGCTCTCTCCTCCTCACAGCAGACGCCTAGACCAGCCGTTCTCAAATGCAGACAGCCAAAGACATCTTATTAACTGTTAACTCAGTTCTTTCTAGGACGCCTGGTTTCTCCAGAAATCGTTGGCGGAAGGTAACCTTCATAGGGAATGCCGCTCATTATGCTCGAGAAGCCTGGCGTTGAGTCGGCGCGCGGAGGAAAGCTCCCGTCAAGCCCGACGGGGCAACTGGCGGGCCTGGGACCTCACTGCGCAGGCGAGGGAGCAGCAGCTCGGCGCCGTCAGCTGCAAAGAAAATCCCCGCGCAGGCGTGATTCCGCAGGCATTAGGTCAGTGGAGGTGGCCCAGGATGGATATTGGCATTGCCGGCAGAGCACAGTGATTCAGAGGCACCAGGAGTGGAATGATAACACCTACTGGATATCTGAGGTTCGAGAGGTTCTGGTAGAACAGGAAATGGAGGATTTCATTGTTTCATGGCAGAGATCCTGTCTTCAGTATGCTGGGCAGAATGTGAAAACCCTGCACGTGGCTCTGGCATTTTTGTGTGCAGACAGGAGCCAACACCAAGGTGACTGGCAGAACACTGGAGCCCCTGGGTGAGATTTAAGAAGCTTCATGAAACTCTCCTTTACCACTAAAAAAGGCCAAGCTGACCTTCAGACTGAAAACCAGCTCCAACCAATTGAGTGAGTCATCTTAACTGGGTCTCATCCCTTAGCCAAGCCATGCCCGCCTGATGCTGTGTGGAGCAGACATAAGCCTTCCTAGCCCAGCCCTG TCONS_00059005 TCONS_00059006 r 3' 34739 TCONS_00059005 TCONS_00059006 r 3' 34873 EMBV3_00996 GTCACGGGGAACGCCAAAAAGCTGGAGGAGGTCTCCACCAGCTCCTGGAGGGGTTCCAAG Variant GeneID:613653|ITPA:NM_001076282:1270_cdna 81^309 5 EMBV3_41385 GeneID:613653 13 GENE ITPA MGC137583 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) EMBV3_10129 GTCCCAGAGACATGGTGATCCCTGAACAGGAGGGTTTCATTCTAATTTATCCAGGCCTTT Gene GeneID:515330|MYO9A:XM_002690529:559_cdna Constitutive 2 NULL GeneID:515330 10 GENE MYO9A NULL myosin IXA EMBV3_22260 CTTAGGCTTGTGGCGGACTAGACCCGCTTCTGGCTCATCTTTTGAAGTACTGAGACGTTC Gene BVT0102_067624 - 1 EMBV3_25814 GK000027.2:4942959-4951590 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22097 GGCTGTCAGTAGCGGCAAGCGGAAAGAAGGGATTATTCATAGTCTCATTGTGGATAACAG Gene GeneID:616795|FAIM:NM_001079626:84_cdna Constitutive 1 NULL GeneID:616795 1 GENE FAIM NULL Fas apoptotic inhibitory molecule EMBV3_41208 GTCACGGGGAACGCCAAAAAGCTGGAGGAGGGCCGGATTGTGGTGCCCCGTGGCTGCCGG Variant GeneID:613653|ITPA:NM_001076282:1270_cdna 81^425 5 EMBV3_26281 GeneID:613653 13 GENE ITPA MGC137583 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) EMBV3_36454 GTGAAGCCTCGACATAACAAAGGATGTAATTGCAAGAGGTCGGGCTGCCTTAAGAACTAC Gene GeneID:523398|MTL5:XM_002699419:80_cdna Constitutive 0 NULL GeneID:523398 29 GENE MTL5 NULL metallothionein-like 5, testis-specific (tesmin) EMBV3_26888 TTTCCTTAGGGGCCGCACCACTTTACATTCCAGCAATGACGCACAAGGGTTCCAAGTTCT Gene BVV0102_077275 + 0 NULL GK000012.2:18139507-18173150 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29953 CACATAATACTATCAGGAACTGTTATCAAGGTGAAGCAGCATATGGCGAATTTAACCTCA Variant GeneID:530908|CREG1:NM_001075942:29_cdna 500^684 1 EMBV3_15461 GeneID:530908 3 GENE CREG1 MGC140761 cellular repressor of E1A-stimulated genes 1 EMBV3_27750 ATCAGCCGACCCTCAGGAATGTAGCCAACCACCGCTCCTCAGTGCTTTAGGAAGACCGGA Gene BVT0102_081977 + 0 NULL GK000025.2:37801160-37807382 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145478 TCONS_00145485 TCONS_00145486 TCONS_00145469 TCONS_00145484 TCONS_00145479 TCONS_00145474 TCONS_00145466 TCONS_00145481 TCONS_00145472 TCONS_00147254 TCONS_00145464 TCONS_00145482 TCONS_00145477 TCONS_00145465 TCONS_00145483 TCONS_00145476 TCONS_00145475 TCONS_00145470 TCONS_00145468 TCONS_00145471 2 XLOC_088842 XLOC_089322 Coding TCONS_00145478 XLOC_088842 Coding Coding SMURF1 25:37715484-37804465 j TSS109014 5603 1 TCONS_00145478_3 556 0.0769230769230769 18 0.937233086086761 0.000374733300657387 7.00339585692131e-09 0.00110921793686094 0.000893219044615227 9.90974499485146e-12 0.00108919041133017 0.00075331695990138 0.000671747982309533 0.000990526314154706 5.75723716519243e-12 0.000256319974560761 0 0.000188558093845804 0.0015331753628679 0.00060874024697776 4.63730729785181e-09 2.42209352471499e-30 8.91701132120621e-18 0.000466790464970247 0.00243792747476038 0.0010044516280525 3.5572085119036e-19 8.2251268922583e-17 1.19843418655052e-09 0.00274377909064807 0.000148318382756368 1.60258456034633e-08 2.87059681690402e-08 1.30833488994341e-08 5.96908283517234e-05 XM_005196999.1 SMURF1 PREDICTED: Bos taurus SMAD specific E3 ubiquitin protein ligase 1 (SMURF1), transcript variant X1, mRNA. 0.0 8808 99.12 0.879885775477423 NM_181349.2 SMURF1 Homo sapiens SMAD specific E3 ubiquitin protein ligase 1 (SMURF1), 0.0 2893 82.09 0.519364626093164 TCONS_00145478_3 sp|Q9HCE7|SMUF1_HUMAN SMUF1_HUMAN E3 ubiquitin-protein ligase SMURF1; 0.0 1126 93.81 0.998201438848921 2 coding 0 0 0 0 -0.319089590618873 0.0707089139027647 -0.00826570952634427 0.933133233112474 CCTGGAAACTACGTAAATTATGTGGAAACTACATAATGTACGTAGGAATGAGCTATCTTGTTGGCAGTGGGAGGGTAGGTTTCTGGCCCCATCTTTGAACTTGTCGAGGGGAGGTTAAAATCTCTTCTGGAAACTTGGGAAACCATCTTTCAAGAGTATTATGTGCCAAGAACCTTGCAAAGAAAGACTTCTTCAGGCTCCCTGACCCTTTTGCAAAGATTGTTGTGGACGGATCTGGGCAGTGCCACTCAACGGACACGGTGAAGAACACACTGGACCCAAAGTGGAACCAGCACTACGATCTATATGTTGGAAAAACGGATTCTATAACCATCAGCGTGTGGAACCACAAGAAGATTCACAAGAAGCAGGGAGCCGGCTTCCTGGGGTGTGTGCGGCTGCTGTCCAACGCCATCAGCAGATTAAAAGATACTGGCTACCAGCGTTTGGATCTGTGCAAACTAAACCCCTCAGATACTGATGCAGTTCGTGGCCAAATAGTGGTCAGTTTACAGACACGAGACAGGATCGGCACTGGCGGCTCTGTGGTGGACTGCAGAGGCCTGCTGGAGAGCGAAGGAACCGTGTATGAAGACTCTGGGCCTGGAAGGCCCCTCAGCTGCTTCATGGAGGAGCCAGCCCCGTACACGGATGGCCCCGGGGCCGCTGCTGGCGGGGGCAACTGCAGGTTTGTGGAATCCCCGAGTCAAGACCAAAGACTTCAGGCCCAGCGACTGCGAAACCCTGAGGTGCGAGGGTCGCTCCAGACGCCACAGAACCGACCTCACGGCCACCAGTCCCCGGAGCTGCCCGAAGGCTACGAGCAGAGAACCACGGTACAGGGCCAGGTGTACTTCCTGCACACGCAGACGGGAGTCAGCACGTGGCACGACCCCAGGATACCCAGAGACCTTAACAGCGTGAACTGCGATGAACTTGGACCACTGCCGCCCGGTTGGGAAGTCCGCAGCACGGTTTCCGGGAGGATATATTTTGTAGATCATAATAACCGAACAACCCAGTTTACAGACCCGCGGTTACACCACATCATGACTCACCAGTGCCAACTGAAGGAGCCCAGCCAGCCACCACCGCCACCCAGCGAGGGCTCCGTGGAGGACGAGGAGCTGCCCGCCCAGAGGTACGAGAGAGATCTGGTCCAGAAACTGAAGGTCCTCAGACACGAGCTCTCCTTGCAGCAGCCCCAGGCTGGCCACTGCCGCATCGAGGTGTCCAGAGAGGAGATATTTGAGGAGTCTTATCGCCAGATAATGAAGATGCGACCAAAAGACTTGAAAAAGCGACTCATGGTGAAATTCCGAGGAGAAGAAGGCTTGGACTATGGAGGGGTGGCGAGGGAGTGGCTTTATTTACTGTGCCATGAAATGCTGAACCCGTACTATGGACTCTTCCAGTACTCCACGGACAACATTTACATGTTGCAAATCAACCCAGACTCTTCAATCAACCCTGACCACTTGTCTTACTTCCATTTCGTGGGTCGGATCATGGGTCTGGCTGTGTTCCACGGACACTACATCAATGGGGGTTTCACGGTGCCTTTCTACAAGCAGCTACTGGGGAAGCCCATCCAGCTTTCTGATTTGGAATCGGTGGACCCTGAACTCCATAAGAGCCTAGTGTGGATTCTAGAGAATGACATCACCCCCGTGCTCGATCACACGTTCTGCGTGGAGCACAATGCTTTCGGGCGGATTCTTCAGCACGAACTGAAACCCAACGGCAGGAACGTCCCCGTCACAGAGGAGAATAAGAAGGAATATGTCCGGTTGTATGTAAATTGGAGGTTCATGAGGGGAATCGAGGCCCAGTTCCTGGCTCTTCAGAAGGGGTTTAACGAGCTCATCCCTCAACACTTATTGAAGCCTTTTGACCAGAAGGAGCTGGAGCTGATCATTGGCGGCCTAGACAAGATCGACCTGGACGACTGGAAGTCCAACACGCGGCTGAAGCACTGTGGGGCCGACAGCAACGTGGTCCGGTGGTTCTGGCAGGCGGTAGAGACCTTCGATGAGGAGCGGCGGGCCCGGCTGCTGCAGTTCGTGACAGGCTCCACGCGGGTCCCCCTCCAGGGCTTCAAGGCGCTGCAAGGCTCTACAGGCGCCGCAGGGCCCCGGCTCTTCACCATCCACCTGATCGACGCCAACACGGACAACCTGCCCAAGGCCCACACCTGCTTTAACCGGATCGACATCCCGCCCTACGAGTCGTACGAGAAGCTCTATGAGAAGCTGCTGACTGCGGTGGAGGAGACCTGTGGCTTTGCCGTGGAGTGAAGTGCACCCTGAGGAGCAGACATGAGCTCATGGCCACCAGACCCCGAGCGGCAGCTCTGGATGCCTCCGCGAACCGGCTGAGGCCCTGGAATCCTAGGAACCCGAGGGAAACGCTGGTCTCCCCTGCTCTTTGCTGGGGGAGCGAGGGGCGGGCAGACTGCGGCTGGTGGCTCCTCCCACATTCTCCCCCTCCTGGCAGGCCCCCCCCATCCCCCCATCCAATAAACGCAGCCAGGTCAGCACGGCTTCGGTCACACGGGACCCTCTGCTACAGCCGTGGCACTTGCGGTGGCAGCTCAGCGCCCATGGGCTCCATGGGAGTCTTGACTCCCAGGGAGGGAGCCGTGAGGGGCTGCCCGGGGCACACCCCACAGCTGGACCCGCTGCTCTGTCTCAAAGCCGACCTAAGGCCCCTTTTCGAGTTCAGCAGCTCGGATTCCACACCCCATGTCCCAGCGGCCTGCTCTGGGTAGCAGGTTAAGTTCTGACAGTAACGGTAAAGGAGATGCTTACTGGAGTTCCGCCACTGCAGGAAGCTGGCGTCAAGAAGATGCTTCTGATTTGGAAGGGGACACGAGTCGGGGCGGCTTGCGCTGGGGGCCTGGGTGTTTCTTTTCAGGGTTTCCTAGCTGAAAACTTTGTTCTACAGAGAGAAAAATAATCTTTCCTTTTCAGAGTCCCTTTAGCCACATTGTCTATCCAATTCAAAATATTTTTCCAGCGAAACCACCACATAGCAGAGCTTATAAAACAGACCAAAAACAGCCCCGCCCCGCCCCACACCTGGATACTAACGAACCATTTTGTGGAAAGTGCTTAAGAACTAAACTAACAGGACAGAACTCTGACTTCATAGCTGCTGGCTTGGTGCGAACTAGCTTGAAAAGGAGAGCGAGAATGTCTAATCCTCATGATCGACGTTCACCCCAAGTCACCTTTTTACAAAAAGTGGGTCGTGGATGGAACCCGAAGGCAGAGGGGCCCCAGGACCCGCTGGCCCATGTCCCCATCTGACGGCAACGCTAACCAAACACCGTGGTGCGGCTCACCCGCCCAGGCGATGAGCAAGGCCAGAGAAAGCCTTGACCCTAAATTTCTAACACCATTTCCCAATTTGCACAAAAGTTCAAATAATTTTTAGAGTGGTTCGATTTTAGATAGCTAAACTTCAGTGGGAAAACAGCAGTGGCGGCACACTCTCCGTGTGGACTTCCGTTGTTTTTGTTTGGGGGCCGAGTGCAGGGTAACTCACTAGCAGGACGAGTCCCTGTTGAACTTCTGTTGTGGACGCTCCCGAGGTCCGTGCTGGGATCCAGCCGGCTGTGGGTCTGGAAGGCGCTTTCTGACCTGTCTGTCCTTTTTCGTTCCCGACGCCTGTGGACAGCGTTACCCTCTGCATCTTGCTGTGGTTCTTCTCTTGACCTGGAAGCAGTCAGTGGCCTAGGGTTGGGGGGCAGACTGCAGCTGGGGGTTCCAGGAGAGAAAGCTGTGCTGCCGGGCGACTCGCTGGGGTTCTAGAATAGGAAGGATGCCGTTGGCTGTAAAAGGAAAAGCGCCCCCTCAGAATGTGAAGGCCAGGCTTGGGGCTGAGCTGTGCCCGGGTTACCATCACACTTTCTGGGTGTGCTGGGAGCTGGCTCCTCGGGGGTGTCCTCTGGCGGCGTGAGGGTACAGACACACACACCCGCCCTGCGACCCATACCTAAACCTAGAGGAGGGGACCGAGGGGGGAAGACACCTGGTTTTCCTGGGTGTCGGCCAGAACCTGCCGTAATTAGGGAGGAAACGAGGGTCTCGTGGCTGTAAAGACCTCGAAGCAGGAATGAGGCATTTGCCTCCTTTCCAGTGACCTTCCTGCTGACGGGGGATGGGCTGCTTCCTGTGTCAGATGTCACCTCAGCAAGAGCAGAGGGTCTCCTCGGGGCTCCTCCGCGGGCTGCTGGTGACAGCTTCACCTCCCCCCAGGGCCCGGCTCTGTGTTTCCCTGCTGGCACGTGGACGCCTCGGCCCCCACAGCTGGTGTCGGGGAGCCTAGCAGAACCTTCCAGAGCTCCAGGTCACTCTTGCCAAGCAGGCCTGTCGGTGGCACTGCCCCTCGAACCTCAGTGTCCACGGGGACTGGGCCTTTCGACCCTCCACCCCCACCAAAGAATCGTGTCTAGCCCTGGGTGGTCCCGGGTGAGCCCCCCGCCTCTGCCCGGAAGCTTCAGGGCCCGACCTCCAGGCTTGCCTCACCAGCGGCCATCAGCCGACCCTCAGGGATGTAGCCAACCACCGCTCCTCAGTGCTTTAGGAAGACCGGAGGGGCTGCGGGGCGGCTGCCAGCCGTCCGCCGACTCCTCCCGGGAGAAGCGCCTGGGAATGAGGCCCGGGGCTCGCCCAGCCCAGGGTCCCAGTCCAGGTCGGGCGGTCGTCCAGGCCAAGCTATCCGAGAAGACGCCCCGGCTGCAGCCAGGTGTTGCTGCACGGCAGCCTTCCCAACACATAGTATGGATTTTTAAAGTTGGTTTATTTTTGTCTCTCAACCACTTTATAATGTATTTTTATTTATTTTGTTTTTAAGTACTGCTGCTATCCTTGTTATCCTTCCCACGGTTTTTATTGCTGATTTATTTTGTGAAAGTTGTACACTAATGTTTTATGTCAAAATCAAAAGTATTTAAAGAATACTAGTTCTATTTAATGTGGTTATAGAACCAGCTGGAAACACAAAACAGTGGTTGAACAGCAGGCTGGACCCCGGCGGTCAGGTTCATTTTGTTACATATGCAATAAACTCACGACTTTACGTTTTTGGCGTCTGTTATTTGGTGTGCAAAAGAGATTCCAGCTTTTTTTTTTTTTTAAACAAGACAGGAAGCCAGTGGCAAGGGCCTTCTAAAGAAAGGGGCAAACTCACCACTCTAACGGCAGGAGGAGCTGATGGCAGCAAGTTTGGAAAACAGTATGGAGGTTTCTCAACAGACTGAAAATCGAGCTACCATATAAGCCAGCAATTCCACTCCTGGGTTTATATCTGAAAGAAAGCAGAAACACTAGTTCAAAAAGACACCCCCACCAGTGTTCACAGCAGCATAACTCACAATAGCCAAGACATGGAAGCAACCAAAGCGTCCAACAGATGAATCGATAAAGGAGATGTGGTGTATATGTATGTACGTGTGCATGCGTATATACGTACGTGTACACACAGAGTGGAACACTGGGCCATAGAAAGTATTCTGAAGTTCGCAACAACATAGATGGCCTTGGAGGGTATTATTCTAAGTGAAACAAGTTCAAGAAATACAAATACTCTGGTATCAC EMBV3_42852 CTGGAATTCTGCAACCAAGTTTGGGGAAGACTGTAGAACAAGGCTCATCAAACCACAGCC Gene BVT0102_059851 + 0 NULL GK000001.2:141994737-142875108 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005493 TCONS_00005494 1 XLOC_001274 NonCoding TCONS_00005493 XLOC_001274 NonCoding NonCoding - 1:142661376-142665508 - TSS2718 426 1 TCONS_00005493_2 71 0.586854460093897 2 0.897361413701283 0.003299860957146 0.0034467062037354 0.00165443461625852 0.0015924532790596 0.0016962678379604 0.000797979777666208 0.000800231392649422 0.000991551558564589 0.000741845574183955 0 4.8797132065805e-06 3.44551370301119e-05 0.000315740384497593 2.41467853662922e-05 9.24289359762994e-05 0.0011156813098814 0.000574178933189156 0.00157237510772789 0.00267548167307652 0.00320606735217573 0.000850332708596703 0.000812902954208977 0.000375732220120372 0.000275490907295418 0.00344750914069232 0.00519165961711452 0.00197594145794808 6.97514812185028e-05 2.0952181959132e-05 0.000651954688765819 XM_002697329.2 BOLA PREDICTED: Bos taurus non-classical MHC class I antigen (BOLA), 3e-21 105 85.00 0.230046948356808 NR_027790.1 LINC00478 Homo sapiens long intergenic non-protein coding RNA 478 (LINC00478), transcript variant 1, non-coding RNA. 2e-06 57.2 83.64 0.122065727699531 0 noncoding 0 0 0 0 -0.963628384660076 0.0185211277607397 0.0187048330108534 0.708725999545454 TCCACCCCTTCCCCCATTATCCTCTATGCACAACTTAAGGTATAAAAACTACTTTGAAAAATAAAGTGCGGGCCTTGTTCACCGAAACTTGGTCTCCCCATGTCGCTCTCTCTCCCAAATTCTGGCTGAGTCTCCATCTGGAGCGTGGAACCAGCCATGCTTGCTAATTATGCCTGGGCTTCTAAGATCCGACTGGGGAGGCCTCAGTGTCTCCTCTCCTTCGGGAGAATGGAAGGACGCCTGCAGCCTACTAGAATGGATTCTGGAATTCTGCAACCAAGTTTGGGGAAGACTGTAGAACAAGGCTCATCAAACCACAGCCTGTGGACTGAATGCATACAACTTCCTGTTTCCTCGTGGCCCACAATCTAAGAGCAGTTTTTATGTTTTAAATAATTAAATTTGAAATCATTGCCTAAGTTCCTA TCONS_00002399 r 5' 200471 TCONS_00002399 r 5' 196514 EMBV3_21016 TCCCAGCTGTACCGTAACTGAACCTACAGGTAACCCTTCCACCTGTCTATCAAGCCAGCT Gene GeneID:507942|MGC152281:NM_001101891:5_cdna Constitutive 1 NULL GeneID:507942 11 GENE MGC152281 NULL hypothetical LOC507942 EMBV3_39307 AATCCACCCCTCTCCTTGGCAGCCAGACCAGCCCATTACAGCTGGAGACAGACATTCCAA Gene GeneID:534661|PAX8:XM_002691400:343_cdna Constitutive 0 NULL GeneID:534661 11 GENE PAX8 NULL paired box 8 EMBV3_12104 TGTTGGACAACATGAGAAAACTGGAGAAAGAACTGTTCAAAGAGATGGAATCAGTCCTTC Gene GeneID:511983|SCRN3:NM_001075547:225_cdna Constitutive 0 NULL GeneID:511983 2 GENE SCRN3 MGC139546 secernin 3 EMBV3_14585 AGCAGATATGGAATTTTCTGAACACCTCTTTCACATGTGAGGAAGGTTGTCCTGCTAAGG Gene GeneID:520348|MARCH3:NM_001077941:37_cdna Constitutive 0 NULL GeneID:520348 7 GENE MARCH3 MGC142541 membrane-associated ring finger (C3HC4) 3 EMBV3_03856 CGTGGCCAGCTGTGAGCTATGTCAAGGAAAGGGCTTCATTTGTGAATTTTGCCGGAGTAC Gene GeneID:517231|MGC165939:NM_001102041:118_cdna UTR3_Alt 2 NULL GeneID:517231 12 GENE MGC165939 NULL Uncharacterized protein C13orf18 homolog EMBV3_37846 AGTTTTTCTGCAAAATGCCACAGTCACGGACGCCTGACCGCCCATCTGCAAATCTTCCAG Gene BVT0102_273967 - 1 EMBV3_20509 GK000016.2:55466948-55487724 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069659 TCONS_00069658 1 XLOC_042023 Coding TCONS_00069658 XLOC_042023 NonCoding Coding RABIF 16:55485586-55490536 j TSS51894 2456 1 TCONS_00069658_2 109 0.0557817589576547 2 0.50414225095979 0.000398853700306769 5.72710772478901e-05 0.000290121149439064 4.05673422529356e-05 4.82422117045811e-05 7.75824872986173e-05 0 0.000122799966529738 9.62537114958544e-05 5.96152005411957e-06 0.000393772018021104 5.18882928612867e-06 0 1.91494781370282e-05 7.59613571960445e-07 0.0053854847478108 2.57668281664744e-05 0.00149099173152494 6.71488447133572e-05 0.000367101825680341 0.00142639883399908 0.00050976188965538 0.000723534425575158 0.00040355424621499 3.10261649305011e-05 0.0003589046219383 0.000260030281255 0.000211296202805133 4.87296893786373e-05 4.84487453152798e-05 NM_001040596.2 RABIF Bos taurus RAB interacting factor (RABIF), mRNA. 8e-146 522 99.32 0.119706840390879 NM_145510.1 Rabif Mus musculus RAB interacting factor (Rabif), mRNA. 5e-73 280 81.67 0.118078175895765 0 noncoding 0 0 0 0 -0.0814822537303984 0.509942843794168 -9.34284586668749e-05 0.998953508951598 CTGAAGAGCTTGAGACTGCAAAGGGCACTCTTCCTCCCGTCCATGAGGAAGAAGCCGGCGCTGGCCGGCGGCGGCGGCCCGGAGGGCGACCTCCTGCAGGAGCACTGGCTGGTGGAGGACATGTTCACTTTCGAGAACGTGGGCTTCACCAAGGACGTGGGCAACGTCAAGTTCCTGGTCTGTGCAGACTGCGAGGTGGGCCCCATCGGCTGGCACTGCCTGGATGACAAGGACAGTTTCTACGTGGCTTTGGACCGGGTTTCCCATGAGTGACGCGGGGGTGCGGCTCCCCCCTACTATTAAAGCTTTCTCCAGGGACTGCCCTGTCGCCTGCTCTGCACTGACATCCACTGTGAGCGCCACCCGCCCGTCCGGCCCAGGCCCACGCGCCTCCTTGTGGCCTCCGCGCGGGCGCTCGCTTAGGTCTCCTCCCCTCCGCTCTCCCGGCTCTGGACACGGTACTCCCGCAGATCTCCCCTCCCGGCCTCCCTCCTGTGCCGGGCTCCCTGTCTCCACTCAGGAGTTAGGCACGGTCCGCCCTGAGGACACGTGACCCAGAGCACTCACGACGGTGCTGACCACTGAAACCTGCCTTTGGGTCTTGTTAAGGAAAGCGCGCGAGCACCTCAGAGCAACTTGTGTGGCTGACTTTGTCTACAGTAATTTATTCTCTAAGAGTAAAGCATTTCCAGACTGCAGGATTCCAACCACCCCTCAGAAGTACCTTACTTTGGATACACATCTGAGACCACCTAGGGGGTCTCTCCTGGGGCTGATGGAGACTTCACTGTGCAGGCGGCCATGGCCCCCCTTCCCTTCACACCCTGCTGTGGTTTCTCTGTGGGGAAGCTCATCACTGCTGTCAGTGAGCTGCACATCAGCTGTGCGCTCCTGTCTGCCGGCCACGCCAAGGAGACCCCGGCCCTGGCCGTGCACTCGGCATCTCCCAGGATGAGTGGAGAGGGTGGGGTGCTGGGGGTGGTCTTCGCCGTATCTCGCGCGGCTTTCTGTGTGTTTTTCCTGGACCTGTAACCCTTCCCTGGCACCTAGGGGAGACGACACAGTCCACACACAGCTGGCTCAGCAGGACTCTGCAGGGGTCAGACCTCCGTCCAGTGCCTCTCATTGTGGTGGGGCTGCTCTGACAGTTCGATGTTCAGCACCCTTCTCGGTTCTGCCGTCTCTCTCTGAGATGCCTCACCGGCTTGGGAGTCCGTGAGGCCAGGTTCCCAGCCTCCTCCCGCCTTCCCTGCCTCTGAGGCTCAGGAGACTAGAACGGGAGCGAGGACTCCATGGAGACCTTACAGACATTCCTTTCCCCATTTTCCAGCCGCTTTCTCCCTCCTCCCCCCAGAACTTACCCTAAGGGCCCCCCACTAAAGTGCAGGCCTTGGACACAGTTTTGCAACCAACCTCTCACCTGGGCAGGTGGCTTCAGTCCCCGGCTGTAGACTCACAGGCTCTGGAAGATTTGCAGATGGGCGGTCAGGCGTCCGTGACTGTGGCATTTTGCAGAAAAACTGCACATCCCCTCAGGTCAGAAGGGACAAACCACGTAGATGCCTCTGGGCACATACAGCCCCTCAAATTATGAGCCAAAACGTGGGCAGTGTTTTTTAAATTGGACCTTTCCTTAATCACAGAAACGGTGTACATTCATTGCAGATAAATACAGATGCGTGTATAAAGTTGTTTTTAATCACTCGTACTTGCACCGTCCAGAAGCGGCCGACGATAACGCGGTGTACGTTCCTCTCAGTGGTTTTCTGTGTGTACTCGTGTAGGATTTTCAAACCAAACACGAGGTCACATTGTGCTCTCATAACTTACTTTCTCCATTTAACAAAATACGGGCTTCCCACGTCAGTAAACGTCCGCTCTGCCTCCATCGTGTTGAGTCGTTACCTGTACTTCTGTGCTGTAATTTGTTTAAACGATCCACTGTTAGACTGCCTCCGCTTTCTTGTAAATCATGTGATGTCAGTTGACTGTCCACGATTTCCTATTATTTCCTCGTGCTCGTGAGCCGTGGGCTTGCGGTGGGGGGTGTCCCTGGGCTCCGCTTCCTGACGCGGTGCCCCGGAGCGGCGGAGCCCCTCAGCCTCCTGCCCGGCAGTTCCTGACACTGGGTATTTATTATCTTAAATGAACGTGTTGCTACTGTAATGGGAGGAAAAATAGTGTCTTGTTTTAATTTGTGCTTATTTCTAATGAGTATTTTACATACTTGTCATTTGTGTTTCTTTTTTCGAGAATTGCCAAACGTTCCTCCAGTAGCCAAAAATATAGTTGTTTCTCTGCCTTTTCAGCTTGATTTGAAAGAAATAAATGCATTTAAGCAGTGGCAATTAGATTCCTGCACATCCTTGGGCAGAATATAGAGGTTGAGACAGAAAGGAGGGCTGAAACCTGTGCCTCAGGACCATCCTGGGGTCTCTTGGCTGAATAACCAACCC EMBV3_35445 CTTCTTTCTCTGCTGGTCACCCTACCAAGTTGTGATCTTCCTGGACACCCTAGCGAGGCT Gene GeneID:497021|CXCR5:NM_001011675:65_cdna Constitutive 0 NULL GeneID:497021 15 GENE CXCR5 BLR1 chemokine (C-X-C motif) receptor 5 EMBV3_32869 CTCCACCATGGGAGTGACTGTGACATACAGGGAAATGCTCTTGTCTCCCCATTTTCCCAT Gene BVV0102_264697 - 1 EMBV3_01703 GK000008.2:65976089-65993752 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30324 CGTCAGTTTTTGAGCTGATGAGACCAACGGCACTTGCACAGTCTTCGCCTTTATACTCCG Gene BVT0102_109244 + 0 NULL GK000015.2:69531914-70913303 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062238 1 XLOC_037242 NonCoding TCONS_00062238 XLOC_037242 NonCoding NonCoding - 15:70692793-70744460 - TSS46167 309 1 TCONS_00062238_2 50 0.122977346278317 3 0.994077342933457 0.00140900335194888 0.000845498776303103 2.99481444300246e-05 0 4.79338276314103e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 6.96207148765311e-05 0 0 0 0.00020782637593779 0 0.000635297880579344 4.56017272971157e-05 0.000625734417481955 0 0 0 0 noncoding 0 0 0 0 0.00294323007761181 0.985818957910354 0.00909822207601814 0.846652822240488 ATGAGAGGGAAGAATCTCAGCTTTCCACCAAGATTACAGAAAATGGGAGTTTCCCAAAAGGAAAATGAGAGAGCTTCCAGGAAGAATGCATCTTGGGATTGAGTGTCATCATCTACAAAATCAGTCACTGTCGTCAGTTTTTGAGCTGATGAGACCAACGGCACTTGCACAGTCTTCGCCTTTATACTCCGGATTTTACCTGACTGATCCACTTTAAGATTCAGTCTTCAAGAACCTGTTGTATCTAAACTGAAGAACATGGCACAGATGATCTTAGTTCCCTGGCCAGAGATCGAACCTGGTCCCCTT TCONS_00062244 TCONS_00062245 TCONS_00062246 TCONS_00062247 TCONS_00062248 s 3' 550286 TCONS_00062244 TCONS_00062245 TCONS_00062246 TCONS_00062247 TCONS_00062248 s 3' 498679 EMBV3_20051 CAGGATGCTGCGGCCCAGCACTTTGGGGAAGACACCTTCTTTGGCATCTGGACTTGCCTT Gene GeneID:539042|LOC539042:NM_001098098:19_cdna UTR3_Alt 2 NULL GeneID:539042 15 GENE LOC539042 NULL similar to ADP-ribosyltransferase EMBV3_28683 TTGCTGTTCGAGCTACGGATGAGAGCCTCAACAGTCAACCCCAGAAGCTTTTTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_03695 TTTTGCAGAGATGCCTACCCTCCAAGAAGCCATCATCAACCACTCTGACTTCGAGGCCCT Gene GeneID:783189|LOC783189:XM_002689701:161_cdna Constitutive 0 NULL GeneID:783189 8 GENE LOC783189 NULL similar to Uncharacterized protein C9orf128 EMBV3_32933 CAGACAGAAGCAGAGCTGAGATGTGGAATGACTGAGCTTATTGTTTGAGTACGTGGATCC Gene BVV0102_202530 + 0 NULL GK000017.2:70246651-70269591 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078047 TCONS_00078043 TCONS_00078044 TCONS_00078052 TCONS_00078049 TCONS_00078051 TCONS_00078045 TCONS_00078048 TCONS_00078046 TCONS_00078050 1 XLOC_047209 Coding TCONS_00078044 XLOC_047209 Coding Coding CHEK2 17:70266008-70277438 j TSS58166 4295 1 TCONS_00078044_1 163 0.271478463329453 6 0.624726572753522 0.000315543556510994 9.46303489601743e-44 3.45369085076661e-49 3.64086405501894e-06 0.000332619579566409 1.58736975966024e-08 5.7348623112732e-05 0.000413647048572531 6.66427341653531e-28 7.22382212376863e-20 0.0003520823947287 2.69570800387532e-05 1.21835018622881e-06 1.56517393089718e-38 5.86120075263946e-05 0.00204452687734275 4.97295495743951e-10 0.00227856755917252 3.57976089317269e-72 0.0002625326133732 9.91456323210162e-05 0.000544348976290478 0.000608836582308383 0.000591005591979481 2.37378588443815e-07 1.96388888387868e-59 1.29856733818623e-33 0.000117873059426472 5.33011334065431e-05 3.79097618274581e-12 XM_005218062.1 CHEK2 PREDICTED: Bos taurus CHK2 checkpoint homolog (S. pombe) (CHEK2), 0.0 6266 100.00 0.808614668218859 XR_244350.1 CHEK2 PREDICTED: Homo sapiens checkpoint kinase 2 (CHEK2), transcript 0.0 744 84.75 0.159720605355064 TCONS_00078044_1 sp|O96017|CHK2_HUMAN CHK2_HUMAN Serine/threonine-protein kinase Chk2; 4e-97 295 88.27 0.987730061349693 1 coding 1 0 0 1 -0.217918349904729 0.536622563385322 0.0143007977454252 0.784191441145579 CTTAGAATTGCTGAAGGTGGCACCTAGATTACTGATTTTGGGCAGTCCAAGATTTTGGGGGAGACCTCTCTGATGAGAACCTTATGTGGTACCCCCACCTACCTGGCTCCGGAGGTTCTCAATTCCTTTGGAACCGCTGGGTATAACCGGGCTGTGGACTGCTGGAGTTTAGGAGTTATTCTTTTCATTTGCCTTAGTGGGTATCCACCTTTCTCTGAGCATAAGACTCAAGTGTCATTGAAGGATCAGATCACCAGTGGAAAATACAACTTCATTCCCGAAGTCTGGGCAGAGGTCTCAGAGAAGGCTCTGGATCTCGTCAAGAAGTTGTTGATAGTGGATCCAAAGGCGCGTTTTACGACAGAAGAGGCTTTAAGACACCCGTGGCTTCAGGATGAGGACATGAAGAGAAAATTTAACAACTTGCTTTCTGAAGAAGATAAGTTGATGGCTGTGACCCAGGTCCCTGCCCAGCCTTCCACAAGTCGAAAGCGGCTTCTTGAAGGGGAAGCAGAGAGTGCCGACCCCACGAAGCGCCTGGCTGTGTGCGCGGCTGTCTCGTGAACACTGGTGGACCACGAAAGAAGCGTACCTTCTTGAACCCCTCTGCTGCCATTTTCTTTAAATATGTTTTGTATAGTTTGTATTTCATTATGGGACGGCTGCTTTTCCACAACCATTGACACACAATTCAAAATGTGATGGAACCTGGGCTTTGTGCTTCTGCGTGTTGATCAGCTCTTAGCTACATGCCTTTAGTGTGTATCTGATACGTGTACTTCTGGTGCTTCTACTTTGGCTGTAACTAGACATGTTTCTGAGGATACGTCCCTGGGTGAGCTGCGTACAAATTCTAAAGACCCCTTAGAAAGGTGCAGGGGGAGGGGCACAGCAAGTCAGGGTGGGGTTTGTTGAAAGTGGCTGGTTGCCAGTCTTTACCAGACAGTTGGTACTTTGGTGCACATACCATGGCCCACTTTTGTGTTTTTTATTTTAATTTTTTAAATTCAATTTTTATTTTTTTGGCTGCACAGCTTTCAGGATCTTAGTTCCCCAAACAGGGATCAAACCTGTGCCCCCTGCAGTTGAATCATGACGTCCTAACCTCTGGACCACCAGGGAATTCCCCCACGGTTAGAGTCCCATTCTTACCCTCATGGTCCCTAAAACCACAGACCCAGATAAGTTGTGAAAATCAAAAACTTCCTGATTATAGGAAAAAGACCAGAAACATTGACTGTTTGAAATGTAAATAAGGCATGTGGACTTGTCATGTTGACCCAATGATGACCAAGAAGACCCTATGTAAAGTGCCTGCCTTGGTTGGTCTTGTCTAGTGATTCAGTGTGCTAGGTCCTCTGATTACCATCATGTTATAAGTGGGGAACCCAGACTGAAGAAGTGAGGTGACTTACTCAATGTCACACAGCTAGGAAGTGGCAGAGCTGGGACCCAGCCCAGGGCTTCCTGACTCAAATTCATGTTCCCTATCTCCTCTGTCCCTTATTTGATGAGACTCAGGGATGTAGACTCACAGACAAAACTCATGTGAGACTGATGTCTAAATCTTGAATACTGGTATGTTCAATCATGATGGGTGGATACAACCCCATAATCTGTGGAAGTTGGGACATCTTGGGGACAAGGAACAGAGGCCCATTCAAATTACTTCACGGAAAAGATTTGTTTTGCCCTTACAGAGGGCTGGGCCTGGGAGGCCATCAGGAGCCCGGGCAGTTCTAATGGCTGGCTCCTCTTGTCTCCTTCCGATGCACTGAATTTGCTTCTCTGGTCACTTTGGCTGATTGATGCTAGGCCACATTGTAGCCTGCTGACCATGCCATAAGTTGAGTGCCTTGGTTTGGATGCTACTGCTGAGCCAGCCAGGGGAGGGTCAGGGGCACACAGCTGTTGCCCCAGGCAGTGAGGGTGGTGGTTGGCAATGGAAATTAAAAGGGTGTGTAGGCATTCTGAGGCTTGGCTGGCCTGTTGCTGAGGGCTAGATGGGGATTTAGGTGGTTTGCATATTTAAAGGAATGAGGCAGAGATTGCCAAGTTAGATGGGTTTCAGCTCATTTGAATACTTAATGTGAAGGCTGTGGTTTCTTAGGGCATCTTTCCCTCTGGGGTAGTCAACCAGCCCTTCTCTATTTTCAGTGCACTCTCTGATTACACCTACCATGGGTAACGGCCTCCAAAGATGTTCTTATCCTAATCCCCAGAATTTATGAATATGTTCCTTTTTCATGGCAAAAGAGATTTTGCAGGTGTGATTAAGTGAAGGATCTTGAGATGGGAAGGTTATCCTGTTTTATCAAAGTGGGCCTGTGTCATCACAGTGTTCCTTTTAAGAGGGACACAGGGGGAGTCAAGGGTCAGAAGAGAGGGAGTGGTATTCTTTGAAACAGAGGAAGAGGCCACAAGCCATGGGCTACAGGCAGTCGCTAGCAGCTGACCAAAAGCAAAGAAGTGGATTCTCTCCTCACAGCCCCCCTGAAGGAACCACTGCTTTTACTTTACACCTTGACTTTAGTCACATGAAACTGATTTTAGACTTCTGACCTCCAGACTTAACAGAATAAATGTGTATTGTTTTAAGCCACCCAGATTGTGGTAATTTGTTACAGCAGCCAGAGGAAACATATACTCATTAATGAGACATCAACTGCTGATCTGGGGATACCAAGCATCCACTTCCACTTCTTAACCTCATACTCCACTTTTCTTTAGGGGGGAATTCTTTCCCCCTATCCCATGAGTTCATAGCGGGAAGGCGAGATGGTACCTAAGAAGCCAAAGGGGTCCCTAGAGGCCTCTCCCCTGGTAGAGCTCCTCCCACTGACTACCCAGCTGGAGATGGGCACAGGACTAAAACATTAGGAAATGGAGCTAGGATGGCAACATTAGTAGGAGCAATTAGAAGGGGTAGGGGGGGGTCCCTTTTTCCACCTGCCCCACCCACCCGTGTCCTGGCAGGGCTGACCCCACTCCCTTCCTAGAGGGGCTCCATATGATCCATTCTGGCCAGTCTTGCTGTGATAGGCTCAGGCAGATGCATGTGACCCAAAGGGGCCCTAAAGAAAGAAAACCCAAGCCTTTGGCTGGAACTACTGGGAAACAGTTCCTGCTGTGAATATGTAAAGTCACATTCATAAATCATAAGTTAGGACGAGAACACCTTTGGAGGCCATTATTCACCCTACCATGGTAGAGGTGTGAGCTGGGAGGTGCCTGGGACACTGGGGAGAACTGCATGAGAATGAAGTCATCACAGACAGAAGCAGAGCTGAGATGTGGAATGACTGAGCTTATTGTTTGAGTACGTGGATCCAACTATCCCTTCAGTGAGGTACCAACAAGGACTTTGATTTGTTCCCTTAGTTGATTTACTTCAGGTTGAGTTTTTTTAAATTAAAAAACAAATTAATTTTTTTCATTGTTTGGTCACTTGTGTCTGGAAGAGGCCAGACTAATAAATTCAACCATTTGCAAACTCTAAGAGACCCTTGGACACTCTTCTTTTTAAGTAGAGAAAACTAAACAACTGCTGTTGTTTTTGTGCCAACTTCAGGGTTTTGGGAGAGGTTTGGGGCAAAGGATGGAAAGTGAAGATGTGGGAACTAAGAGTCCCTCCAGCCTCAAGGTTGAGAGAACCCCCTCCCAGCTAATTATACCACAGGGTTTGGGAGCAGAGCCCCCTTCATTAAACTTTTAGGAGTCTTGGAAGGACAGGGCTGGAATTATACCACTGAAACTTGGAGAGCTTGCTCTGTGCCAGGCATGGTGCTCAGACACGTGTGCTTCCTCAGAAAGCTCACTTCAGCCCTGTGAGGCGTTACTGCCCCTCCTCGCTTTACGGGTTTAGAGATTTCCCAGTTGGCAAGAAGTGGAGGCAAGACTTGAACGGAAATTTCCCTTTTCAAGAGACCTTGATTTTTGATCATAAAATTACTTAAGAGGTTTTTGTCACCAGTTTACCACTTGATAAAAGTACTAGGCGCGGTATTGATATTTTATCTGGATTTCTTCAAGTCCTCTGACTTGCCTTAGTTGTTAAACCTTCCCCATTAAGGAAAAACAGGCTTCTGGAGACCTGACCTTAATCAGGTAAAGGTTAGTGGAGATGCGGGACTCGAACTCAAGTTTCTCCGTTGAGTGTGGCTTTTCCAGAGGCACAGACATCCAATTGTGCCGCTTAAGTTCACGCACGTGCTCACAGACCACCGCGATGGGGATCTCGATCACCTTAGCGGTGTCCTTCACCTCACACTTCTTGGGGGTAATTCCCTCTTGGG EMBV3_28891 GCACACACACATATTTGACCCCAAAGTTCTTAGACAGTTTCCGTATCTCTGCAGTGACTC Gene BVV0102_014420 + 0 NULL GK000003.2:18184874-18222991 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41710 GTTCACTAACGATTTTCTTACTGGCTAGAGTTCTTGGTGGAGAAGTTGCGTATGGCCAAG Gene GeneID:615287|YIPF4:XM_002691219:47_cdna UTR3_Alt 2 NULL GeneID:615287 11 GENE YIPF4 NULL Yip1 domain family, member 4 EMBV3_09699 TGCCCTACAGCACGGGGAAACTGCCCTATGGGGTTGGCCCCCAGGCTGCAGCAGCAGCGG Variant GeneID:280781|ELN:NM_175772:20_cdna 720^779 3 EMBV3_24583 GeneID:280781 25 GENE ELN MGC148808 elastin EMBV3_12242 GGGCCTCCGTCAGTCAAGGTGGAGGGAATACTGCGGTTCTCATCAGAAGGTTTAACTCTT Gene BVT0102_329939 + 0 NULL GK000028.2:42250572-42266633 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14393 AAGCTATGTCTACCCCAGTGTGTGTGGCTATAATCTACAGTTCAGCTAAGGAGTTCACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04631 GACCTGGGGGACATTCCGTTTGAGATGTACTGAAGTTACAGTGTCTGGGAGGTATTCTCC Gene GeneID:541080|FUBP3:NM_001101217:190_cdna UTR3_Alt 2 NULL GeneID:541080 11 GENE FUBP3 NULL far upstream element (FUSE) binding protein 3 EMBV3_26188 GCCCAGGCTTCTGCTGTCTACCTTCCTTTGTATATCAGGTGTTGCTCACCATCCCATTTA Gene GeneID:512817|ARHGAP1:XM_002693534:142_cdna Constitutive 0 NULL GeneID:512817 15 GENE ARHGAP1 NULL Rho GTPase activating protein 1 EMBV3_24478 GTGCACGACAGCTAGAGAGTAACCCCTGATCACAACCAGAGAAAACCTGCATACAACAAT Gene GeneID:528646|ABCD4:NM_001015636:139_cdna Constitutive 4 NULL GeneID:528646 10 GENE ABCD4 NULL ATP-binding cassette, sub-family D (ALD), member 4 EMBV3_14815 CGGATCTATGTCCCCAGTGGCCCAAACCTTTAGAACCTTTTAACTCTTATTCCAAGAGGC Gene BVT0102_350400 - 1 EMBV3_36392 GK000012.2:54147845-54452887 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035406 TCONS_00035404 TCONS_00035405 1 XLOC_020898 NonCoding TCONS_00035406 XLOC_020898 NonCoding NonCoding - 12:54159744-54231201 - TSS25960 2623 2 TCONS_00035406_2 85 0.320625238276782 3 0.96333407971339 0.000553898310345621 6.94463177250287e-05 4.96163615257513e-12 1.31582778553141e-15 0.000184449115054897 1.22207663842628e-05 0.00014609950992269 0.000111614401019344 7.41718981151655e-08 1.04302942270475e-05 0 0 1.00369803226254e-15 1.25414258239859e-05 3.60867805686698e-05 0 0 0 0.000165338921048079 1.89856742372332e-12 6.24917679660905e-13 0 0 0 8.49409302802557e-05 1.25586315625444e-08 0.000101573932024828 0 0 0 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 2e-59 235 85.45 0.0796797560045749 0 noncoding 0 0 1 1 -0.00813861721543846 0.952672581076459 -0.0275224025804211 0.564740294088987 GATGGCCCTGTGATAAACTTTTCTCTGTTCCAAACTCCAACATCTCAGTTTGCTTGGCTTCACTGTTCAGTGGGCTCAGGAACTTGTCTTCAGCAACAAGGACTGTACCAGAATTTCTAGCTTGCACAACAAGGTGAAGTCTGGATGGTAACTTGAGAAGACGTGTGCAATGGGTTATAACTGCCTGGCTACACAAAAGGCCTCAAGTTGGCACAGTCAGTTACCTCCGAAAAGGGACAGACTCAAAGGTCTTTGTTGTCAGCTCTACCCTAAATCACATGCCTGGGAAGGTAGCCCCCTGGATAGTACTTATGGCCCCTAATTGAAACTCAGTTCTCTAGAAGTTCACTACTGAGTGGATGTGGGAAGAGATAACAGGTGGACACATTTTTGACCTTGGCATATACTGGCATTCATGAAGAAATCAGCGCCTCCTCCCAGGCACATCTTGGTGACTTGCAGAGTGACTTGGCATCATGTCTGACCCTTGGAGGGAGGAGGAGAAGGATGAAGAAAGGCTAAAAGGTGGACGTACTTTCTCCTCAGACGTTCTATTTGTCTCCTTCCATGAGATTTATTTTTGGCACACAGAAGAGCTTATCCATAGGGGGACCATTTTAAAATTGCTTGTGAAGAGCCGGCTTCCTTCCAAGAGGAAATGTAACCTTGTCTTCATCTGGCACATCAGATCAATGTGCTGTAAAAGATCATGTTCAGTTACCTCATTTTTTTGAATTAGAATTAATGGCTCATTAGTCTTGATCATATCAATATTATAACACCACTTCCACTTGATAGAAGAAGGAGGAATGCTGGCAGAGTGCACTTAGTCCCCTGACTCTTGGTGAACAGACCACATGCCTGCCTCAGGGAAAGCCAGAGACATCATGGAGGTGGCCCTTTTCAAACCCACCCCATTTAGGGCAAGCGTGGACCCTTGTGTCAGAGCCTCTTGGAATAAGAGTTAAAAGGTTCTAAAGGTTTGGGCCACTGGGGACATAGATCAGCATTTCCCCCACTTTTTAGCAGCAGACCCCAGTCGGGCAACCAGACACCCACAGCTTTTCTTTGGCCACATGTCAGACCATATGTTGGAAACTGGAAAAATAGACATTAAGACTCTTCTCTTGAACCTTTCTCCCATGAGGAATGTCATATGACATTCCTCAAGGAGCATATATTTCTGCAGGACTCAGAGAAACAGGCAGGTTGACTCTTTTGAAATAAACATAAGAAACATTGGCAAGCACAAGATGATATTAAGAATTAACCCTTTCCCAATCCCTAAAATTTGCCAGAAGAAACACCAATCAAATGGGCTCTAAAAATATGCTGTTCTGGGCTTAGTCACTCAGTCTTGTCTGACTCTTTGTGACCCCATGGACTGTAGCCTCTAGGCTCCTCTGTCCATAGGGATTCTTCAGGCGGGAATACTGGAGTGGGTTGCCATGCTTTCTTCTAGGGGATCTTTCCAACCCAGGGATCAAACCCAGGTCTTCTGCATTGCAAGTGAATTCTTTATCATCTCAGCCTCCAGGGAAGCCCTCTAAAACTATAGCAAAGAAAAATCAAAACTGCCTTTAAGAAAGGAAGCACTGGACCAGGAGTCGGGAACTCTGGCTGTGTTCTTGGTGTGGTCATTAGCTAACAGTGTATCATGAGTGGCAGATGTTTGTTATTTTTTGCCTGCTGGCATGGTTTTCCTTTAGACATTGTCCTCATTCTCACCCCACAACTGTTGGGCTGTAAACCTATGGTACTCAAGTCTGTATCTTACCTCCCTGGCCACAGTCATGGACTTGAGGATGAGTACACAACCAAGCCAGGCCACTTAGGGGCTTCCCCTGGGAATTTGCTAGATGCATCAGGAATTATGAATCGCCAGGATAATCCAAGCCAATAGCTACTCGTCTCTGTCTTTGTCATAGAAAGGCAACCCAGAGAAAGCAGACTTAAGAAACTCCAGGGTGATGCAGAGCTGGCTGGTACATATTTGAACCCCTGCAGTTGGTCACTCCGGAATCCCCTTTTAAACTGGGTAAAAGCATCCCTTTAGTTTCAGATGAGATTTGGCCACTTGGAACCTGATTATTACATTTGTATATTTGGATTCACCTCTCTGAGCCTCCCTTTCTCATTAGTGAAGGAAAATCGACAGTTTAGTAGATTTCTAAGTTTCTTTCCACCTCTGAGCATTTTTAAATTTTAAGTCTAAATCTCTCTCTCTTCTTTTTTTGAATAATTGAAGTATAGTTGATTGAGAAAGAAATGGCTACCCACTCCAGTATTCTTGCCTGGAGAATTCCATGGACCGAGGAACCTGGCGGGCTACAGTCTGTGGGGTCACAAAGAGGTGGACACGGCTGAGCGACCAACGCTGTCACTACTGTCATAGTTGATTTACAGTGTGTGTTAGTTTCAGGTGTACAGCAAAGGGATTCAGTTATGTATATGTTCTTTTTCGTATTCTTTTCCATTATGGTTTATTACAAGATATTGAATATAGGTCTCCGTGTTATACAGCAGGACCTTATTGTGGGTCTATTTTATATATACTGTTAATCCCAAACTCCCAATTTATCCCTCCCCCTCCCTTATTTTCCCCTCTGGTAACAATACATTT TCONS_00037053 r 5' 10847 TCONS_00037053 r 5' 10847 EMBV3_24802 TAAAGCATTGCAGGTGGAAGCTGGGAGCCATGTTGGGGTAGAGGGTTTTTACCTTTAATT Gene GeneID:536656|CCDC109A:XM_002698873:480_cdna Constitutive 0 NULL GeneID:536656 28 GENE CCDC109A NULL coiled-coil domain containing 109A EMBV3_32773 CTATTGTTTACCAAGGGCCCCATGAATAGCAGGCAGATGCTTAGCTTTGGGAGGCAAAGC Gene GeneID:531405|SORCS3:XM_002698472:512_cdna Constitutive 2 NULL GeneID:531405 26 GENE SORCS3 NULL sortilin-related VPS10 domain containing receptor 3 EMBV3_08714 CATTTATCCGCCCCGCTGACCAGTACAAAGACCCGCAGAATAAGAAGAAAGGCTGGTGGT Gene GeneID:535127|MYO6:XM_002690030:17_cdna UTR3_Alt 2 NULL GeneID:535127 9 GENE MYO6 NULL myosin VI EMBV3_05146 GGCCCAGGACCTCTTTGGAGATGACCACAATAAGAATGGGTTCAAAATGTTCGACTCCTC Gene GeneID:539803|MFI2:XM_002684854:225_cdna Constitutive 0 NULL GeneID:539803 1 GENE MFI2 NULL antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 EMBV3_42821 TGGTATTTCTATGCCTGTTGTTAACTCTTTCTGCATGGCTCCCTACGTCAGCTAGACCAC Gene GeneID:522747|GPR12:XM_002691840:104_cdna UTR3_Alt 1 NULL GeneID:522747 12 GENE GPR12 NULL G protein-coupled receptor 12 EMBV3_37687 AGAAGCTGCAGCCGAGGCCACCAAGAACATGGAAGCTGGAGCTGGAAGAGCCAGTTACAT Gene GeneID:512373|DAK:NM_001024524:76_cdna Constitutive 2 NULL GeneID:512373 29 GENE DAK DKFZp586B1621 dihydroxyacetone kinase 2 homolog (S. cerevisiae) EMBV3_29100 CATTCTAAGCAACAACATTCAAACAGAACAAGGTCCGCGAAGGGCTCCCATCCTAGTCCG Gene GeneID:281748|ECHS1:NM_001025206:36_cdna Constitutive 0 NULL GeneID:281748 26 GENE ECHS1 MGC133699 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial EMBV3_11519 AGATGTGCCGTTTTCACAGAATGCAGGACAGAAGAACCTGTCAGAGGAGCAGTCTGAAGC Gene GeneID:519307|LOC519307:XM_002696260:38_cdna Constitutive 1 NULL GeneID:519307 20 GENE LOC519307 NULL hypothetical LOC519307 EMBV3_10426 AGAACGCTCAAGAACTAAAAAGACCTCAAGAAGGCTGGAGGGGAGATTGTCCAGACATCC Gene GeneID:100296522|LOC100296522:XM_002690271:5_cdna Constitutive 0 NULL GeneID:100296522 9 GENE LOC100296522 NULL hypothetical protein LOC100296522 EMBV3_19893 ATCTTAATGTACAGTGTTAGGTATTATATGAATGGAAAGACACCCCCACCCCCACCCTGC Gene GeneID:538494|ZFR:XM_002696401:166_cdna Constitutive 0 NULL GeneID:538494 20 GENE ZFR NULL zinc finger RNA binding protein EMBV3_14267 CAGATGCCTGCTCCGGTGATGTGTGCACCTGCTATGTGGCCTGTAGTTGTGTCCCAGGAA Gene GeneID:526313|LOC526313:XM_002699504:78_cdna Constitutive 0 NULL GeneID:526313 X GENE LOC526313 NULL similar to testis expressed sequence 13A EMBV3_15600 TGAAAAGACGAAGGCAAACAAGAAGAAACTGGGAGAGAAGGGATCCTCCAGTGCCTGAGC Gene GeneID:281644|BFSP1:NM_174247:10_cdna Constitutive 0 NULL GeneID:281644 13 GENE BFSP1 NULL beaded filament structural protein 1, filensin EMBV3_22568 TCCTGTCCTTCTACAATGGCCGTACCAAACAGCTGCTGCACACCTTCAAGGCCAAGTTCA Gene GeneID:510595|FSD1:NM_001081518:9_cdna Constitutive 1 NULL GeneID:510595 7 GENE FSD1 NULL fibronectin type III and SPRY domain containing 1 EMBV3_14771 TCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCAACACAAGAGGCATACTGAA Gene BVV0102_047960 + 1 EMBV3_06411 GK000004.2:27641805-27853325 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178735 TCONS_00073626 TCONS_00240375 TCONS_00107095 TCONS_00178732 TCONS_00206816 TCONS_00098202 TCONS_00107075 TCONS_00117596 TCONS_00185576 TCONS_00230834 TCONS_00162301 TCONS_00088420 TCONS_00206815 TCONS_00158397 TCONS_00098199 TCONS_00240374 TCONS_00201119 TCONS_00050935 TCONS_00098198 TCONS_00185573 TCONS_00222139 TCONS_00222179 TCONS_00233533 TCONS_00088422 TCONS_00238290 TCONS_00106013 TCONS_00080098 TCONS_00106012 TCONS_00185604 TCONS_00240373 TCONS_00107098 TCONS_00217532 TCONS_00207410 TCONS_00056187 TCONS_00157046 TCONS_00063809 TCONS_00178734 TCONS_00162571 TCONS_00220551 TCONS_00218947 TCONS_00142474 TCONS_00054133 TCONS_00142473 TCONS_00217533 TCONS_00062718 TCONS_00142472 TCONS_00157807 TCONS_00231774 TCONS_00066112 TCONS_00011613 TCONS_00230353 TCONS_00176791 TCONS_00186558 TCONS_00186489 TCONS_00131532 TCONS_00238284 TCONS_00230829 TCONS_00157808 TCONS_00185581 TCONS_00238280 TCONS_00054140 TCONS_00232767 TCONS_00107108 TCONS_00178886 TCONS_00185579 TCONS_00162567 TCONS_00106011 TCONS_00106016 TCONS_00107100 TCONS_00098201 TCONS_00107076 TCONS_00162570 TCONS_00158314 TCONS_00186834 TCONS_00071397 TCONS_00012044 TCONS_00111146 TCONS_00212984 TCONS_00222175 76 XLOC_108508 XLOC_045388 XLOC_147039 XLOC_063006 XLOC_108505 XLOC_125336 XLOC_058448 XLOC_062986 XLOC_071762 XLOC_111629 XLOC_140324 XLOC_099183 XLOC_053207 XLOC_125335 XLOC_096851 XLOC_058445 XLOC_147038 XLOC_122767 XLOC_031050 XLOC_058444 XLOC_111626 XLOC_135448 XLOC_135488 XLOC_143015 XLOC_053209 XLOC_144957 XLOC_062697 XLOC_048982 XLOC_111657 XLOC_147037 XLOC_063009 XLOC_131531 XLOC_125926 XLOC_033990 XLOC_095506 XLOC_038535 XLOC_108507 XLOC_099452 XLOC_133868 XLOC_132266 XLOC_086899 XLOC_031942 XLOC_086898 XLOC_037445 XLOC_086897 XLOC_096262 XLOC_141262 XLOC_040830 XLOC_007164 XLOC_139843 XLOC_106565 XLOC_112610 XLOC_112541 XLOC_080237 XLOC_144951 XLOC_140319 XLOC_096263 XLOC_111634 XLOC_144947 XLOC_031949 XLOC_142251 XLOC_063019 XLOC_108659 XLOC_111632 XLOC_099448 XLOC_063011 XLOC_058447 XLOC_062987 XLOC_099451 XLOC_096768 XLOC_112885 XLOC_043168 XLOC_007594 XLOC_067046 XLOC_130301 XLOC_135484 Coding TCONS_00056187 XLOC_033990 NonCoding NonCoding - 14:40546939-40547685 - TSS41864 746 1 TCONS_00056187_3 84 1 0 0.000362646672345132 0.000152848752471123 0.000107530011557588 0.000751984338921877 0.000898240113449633 0.000322219580035594 0.000324074596833491 0.000590193731065914 0.0005603267732261 0.000947959886757199 0.000410231512022664 0.000554737237265706 0.000433110671982301 0.00109523141048364 0.000527593635233779 0.00884216558265508 0.00178315395795984 0.00464862283775673 1.56047153719029e-06 0.000197324501753722 1.41274701894671e-05 0.00170014537345917 0.00186113706593049 0.00243417643171622 8.72338137268331e-06 6.77206466984218e-05 9.46326251690554e-05 0.000783006192358798 0.00101819163868934 0.00116010134785798 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 1e-36 158 73.88 0.35656836461126 0 noncoding 1 0 1 1 -0.12427855949283 0.297782699487679 -1.15269493476454 0.00910502972628543 CGCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAACGCAACCCCGAGATCCCTGTCGCCCCTGGAGAGGAACACTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCTACACAAGAGGCATCCTGAATTCCCCGTCGTAATTCGAGAATCCTGCTACACCTCGAGAAAAACCACGTGGTTCCCCCGTCATCGCAAGATGTAGCCCTGTGCCGCTACAGCGTCTCAGGAGAAGTCCCACTTTAGGAATTGGAGTTCGAAACGGTACTTGTCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTCTCCCTCAAGAGGAACACCGAAGTTTTCCGGCAACACTTCCTCGGAGCCTCTTCTACCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTTCGAACTCCACCCTGTGAATGAAGTCAACACGAAGG TCONS_00051806 . 3' 75475 TCONS_00051806 . 3' 76220 EMBV3_42252 GGCTTCACTGGTTGCTCAGTGGTAAAGAATCTGCCTATCAATGCAAGAGCCACGGGTTCG Gene BVV0102_049373 + 0 NULL GK000019.2:29877190-29956764 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099514 1 XLOC_059757 NonCoding TCONS_00099514 XLOC_059757 NonCoding NonCoding - 19:29948464-29948821 - TSS73890 357 1 TCONS_00099514_1 56 0.966386554621849 1 0 0 0 0 0 0 0 0 0 0 0 0.000109008648387841 0 0 0 0 0 0 0 0 0 0 0 0.000308370958628025 0 0 0 0 0 0.000135983568131885 0 NM_001001159.1 TLR6 Bos taurus toll-like receptor 6 (TLR6), mRNA. 2e-60 235 76.58 0.92436974789916 0 noncoding AAAATTATTTGTTTATTTGTTTTTATTTTTATTTTCGGGCTGTGCTGTGTCTTCGTTGCTGTGCTGGCTTTCTCTAGTTGCAGTGAGCGGGTGCTGTTCTCTAGTTGCGGGGCACTGGCTTCTCATTGCGGTGGCTTCTCTTGTCGTGGAGCACAGGCTCCAGGGCACAAGGGCTTCAGTAGCTGTGGCATGTGGGCTCACTGGTTTCAGCTCCCGGGCTGTAGAGCTCAGGCTCAGTGGCTGTGGCACATGGGTTTAGTTGCACCGAGGCATGTCGGATCTTCTGGAGCAGGGATCGAACCCGTGGCTCTTGCATTGATAGGCAGATTCTTTACCACTGAGCAACCAGGGAAGCCC TCONS_00096299 . 3' 7445 TCONS_00096299 . 3' 7801 EMBV3_00817 AAAGGGGATGGGCTGACACTGCACGGACTGCATTACACAAATGGGACGCCTCCTTGTTAA Gene GeneID:786497|TRIM40:NM_001103306:228_cdna Constitutive 0 NULL GeneID:786497 23 GENE TRIM40 MGC166221 tripartite motif-containing 40 EMBV3_15948 GATATGACTGAAGTGACTGAGCATACCTGCGCAAACTGATCTTCAGCACAGAAGAGAGTG Gene BVT0101_047062 + 1 EMBV3_31425 GK000021.2:45762272-45767403 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119528 TCONS_00119529 TCONS_00119527 TCONS_00119526 TCONS_00119530 1 XLOC_072913 Coding TCONS_00119528 XLOC_072913 Coding Coding SRP54 21:45724849-45765285 j TSS89492 4844 2 TCONS_00119528_3 264 0.0964079273327828 15 0.880573760356127 3.50064195266215e-06 5.72018836984376e-05 0.000288569432111084 1.62435395922443e-05 0.000142715144039699 3.37203841371188e-05 3.31418996222691e-05 0.000135329077128886 0.000289246003142783 0.000158332481452643 0.000213108458815105 5.86126064915728e-07 2.57071499094145e-05 1.23043053360323e-09 0.00014551039603739 6.75929025821476e-06 0.00202824365347628 0.00199228260562526 4.81429658293903e-06 0.00043841935281434 7.932154209952e-09 0.00090325551030993 0.0002432002014696 0.000221333485457508 0.000260318853036442 0.000158065970841704 4.2559903504281e-06 3.80144074951413e-08 3.4523609195776e-05 0.000197968520103807 XM_005222056.1 SRP54 PREDICTED: Bos taurus signal recognition particle 54kDa (SRP54), 0.0 4358 100.00 0.498554913294798 NM_003136.3 SRP54 Homo sapiens signal recognition particle 54kDa (SRP54), transcript 0.0 1584 91.52 0.230594549958712 TCONS_00119528_3 sp|Q2T9U1|SRP54_BOVIN SRP54_BOVIN Signal recognition particle 54 kDa protein; 0.0 542 100.00 0.988636363636364 7 coding 0 0 0 0 0.0386437027494776 0.761541163693946 0.0205269836642738 0.741182986397144 ATGTCAAAGGCCAATCAAGGCAAAGAAACATCTCAACACACTCTCGGTAAACACTCTGTAGAGACGCGCCGAGTGCCCCGGAAGCGGAAGTGTATCCCCTTCTTGAAAGGCTGGACTACGCCGAGTGGTGACGTTTCCTCATTGGGCGGAAGGTTCGGTGGCAGTCGTCGGGTTTCCAGCTGGTGGGAGTTGGCGTTGCGGTACTGGGCGCTGGAACCCTAGTTTATCCAGTTTGGGAAGTCGGGCTGTGGGGTCGCACCTGTCTGTCTGATCCCCGCGTTCCCTGGTTTCCTTCCCCGGCGTGGGGCTTCGCGAAGGTCTCTCGGGCCCCTTTGGGCCACGGCGGTAGCGGTGCCTTTTGCGATTTTCTTGTGATTACATCTTAAAGCTTTCAAGATGGTATTAGCAGACCTTGGAAGAAAAATAACATCAGCATTGCGCTCATTGAGCAATGCCACCATTATCAATGAAGAGGTGTTAAATGCTATGCTAAAAGAAGTATGCACAGCATTATTGGAAGCGGATGTTAATATTAAACTAGTGAAGCAACTAAGAGAAAATGTAAAGTCTGCTATTGATCTGGAAGAGATGGCATCTGGTCTTAACAAAAGAAAAATGATTCAGCATGCTGTATTTAAAGAACTTGTGAAGCTTGTAGACCCTGGAGTTAAAGCATGGACACCCACTAAAGGAAAACAGAATGTGATCATGTTTGTTGGATTGCAAGGGAGTGGTAAAACAACTACATGTTCAAAGTTAGCATATTATTATCAGAGGAAAGGTTGGAAGACCTGTTTGATATGTGCAGACACATTCAGAGCAGGGGCTTTTGACCAACTAAAACAGAATGCAACCAAAGCAAGAATTCCATTCTATGGAAGCTATACAGAAATGGATCCTGTTATCATTGCCTCTGAAGGAGTGGAAAAATTCAAAAATGAAAACTTTGAAATTATTATTGTTGATACAAGTGGCCGTCATAAACAAGAAGACTCTTTGTTTGAAGAAATGCTTCAAGTTGCTAATGCTATACAACCAGATAACATTGTTTATGTGATGGATGCCTCCATTGGACAGGCTTGTGAAGCCCAGGCTAAGGCTTTTAAAGATAAAGTAGATGTAGCCTCAGTAATAGTGACAAAACTTGATGGCCATGCAAAAGGAGGTGGTGCTCTTAGTGCGTATGGGTGACATTGAAGGATTGATAGATAAAGTCAACGAGCTGAAGCTGGATGACAATGAAGCACTTATAGAGAAGTTGAAACATGGTCAGTTTACGTTGCGAGACATGTATGAGCAATTTCAAAATATCATGAAAATGGGCCCCTTCAGTCAGATCTTGGGGATGATCCCTGGTTTTGGAACAGATTTCATGAGCAAAGGAAATGAACAAGAGTCTATGGCAAGGCTAAAGAAATTAATGACAATAATGGATAGTATGAATGATCAAGAGCTTGACAGTACTGATGGTGCCAAGGTTTTCAGTAAGCAACCAGGAAGGATCCAGAGAGTAGCAAGAGGATCCGGTGTGTCAACAAGAGATGTCCAAGAACTTCTGACCCAGTATACCAAATTTGCACAGATGGTAAAAAAGATGGGAGGTATCAAAGGACTTTTCAAAGGTGGTGACATGTCTAAGAATGTGAGCCAGTCACAGATGGCAAAATTGAATCAACAAATGGCCAAAATGATGGATCCAAGAGTTCTTCATCATATGGGTGGTATGGCAGGACTTCAGTCAATGATGAGGCAATTTCAACAGGGTGCTGCTGGCAATATGAAAGGCATGATGGGATTCAATAACATGTAAAGAAGATGCCTTAATATAAAGTGACTCTGTTGATTACATTATTTGCTGCGACCTCAGAATTTCCCCTCCTTTTTGCAAATGGGAAAAAAAAAAGTATTTTTCTTGCCTGTCTTGCCCCCTTTCTTTCTCTTCTTGTCTTTTTCCCCCTCCTTTTCTTTTTCTTTTCTTCCTTTTTCCCTTCCTCCCTTTCATATGGGAGGAATATATGGTTGTTGTGGAAATAATTATATTTTTGCTTTAGATTTTCTTTTCTGTTAGTTTCAACCATCCTAACACTTCTGAAGTTAAATCATGATGTAAAATTTTAGTACTTAAAAGTTTTTAATTGTCTCAAAGGCCAACCATTACCTTTGTAAACAGTCCTGGTCAATAGTTACATGATGTCTCAATAAAAGTGCTATACAATAAACTTCAAAGTCATTATAAGTTAAGGGGTTGTTAACTTTCTTTATGGTTTGAAATGATCAGTGTATCATGTTAAAAGGCAGACAAAAATAATATTTAAAACTGTTCCCAGAAGTATACCTTTATTGGGACACATGGTAGAGTAACCTAACCATTAGTATTAGGAATTTTTGTTTAACTTGGAATAATGAAGATAATTTTGCCATAGAAAATCTTAACTCTGACATTTAAATTGAAATTGTGAATTTGGTTATAGTTCACAATTTAATGTTTTGTATATAACTTTCATTTTTTTTACCTCATATTTTTGAAGCCTTAATGGCAATATTTGATTTTCTTGCAAAGCCAATTTTGTTATGTTTCTTACATACCAAAAATCTGCTTGAAGAAATTGATATACTTTGGTGATAATAGCTGATGTATAGATCTCCTAATGGGAATATAATTGCAGATATTAGGATGTCATTATTATATATTAAAAATAATGAGACCATAACAAGATTGACTTGGTTGTTGGTTACTTTGGATTGCTGTACAGTTCATTTAGAACAATGGCTTTTAAGTAAGTTATGTCATTAATTTAAAACACTACCATAATTCTTATACCTATTCATTATTCACACCGTGAAGATAATAGATACACTGTTATAACGATGTATTTTGAACTAGGATCAACTGATCTTCTGGAGAAGGAAATGGCAACCCACTCCAGTTCTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGTTACAGTCCATGGGGTCTCAAAGAGTCAGACAACGACTGTATGACTTCACTTCACTCCCTTCACTCACTTCATACTTTATTGCTGGAGAAAGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCATGGATGGAGGAGCCTGTCAGGCCATGGTCCATGGGGTCGCAGAGAGTCAGATATGACTGAAGTGACTGAGCATACCTGCGCAAACTGATCTTCAGCACAGAAGAGAGTGAAAGAAATAGCTAGTTTTTGTAGTATTAATTTTTTATGTCTCGAGTGTTTTAAAAAGATCTTAAGAGCCACAGTGTCTTCAGAAAATACATAGAGAATGCAACTGATTTTCTTATTTACTTGGGTAAAGATTTTGTATCCCACTAAATCATTTTCACCAGATAAAAACTTTAATATCCCTATGGAATATTTGTATAAACTGTAAGAATTATGTATCTTTTCTTTTGCAGAAATGTCATCACAAGGTCCAGCTACAGAAATTAGACATTATAGAAAATACTGTTCTCCAAATTAGTCTTTAATGCATGCCACCTTTTCTGGGCATGCATTATTGTGATTTCTGTCCTCAGGGACCACGTTTCCATTTTGACCAAAAAAAAAAAAAATGAGATAGATACTTGGCCAGACTTTATGGATTGGGGCATTGTTTTTAGCATTTTTTGTGTCTGATGCAAATTATCTTTTTCAGAAGCAAAAATAACAGTGGCAAAGGCCAGTAAAAGTCCAGAATGTGTCATTCAGCTTTTGTTTCTCTTTCCTCATCTGTAGAACGAGGAAATTGGAGATACTCTGACTCCATTAATGCCTCAACCTGGCATCTTTTTTGTTACAAAAATTATCCTCAGTTCTCAGTTTTTATCAAAGTACTGATTTTTTGAAAGCATGAGTATACTAAAATCCTTTAATAATCTGAACAAATTTCCTTTTATTTTTCACTATTGTTAAAATTAGTTCCTTAGCTTTTTGATATATTTTCTATTACCAACTTAGAGCACTAGCTAGATCTAATATCATACAACATTGGATTCTTCCTGGATTTGATTATAATGTTATGTAAATATGTACAAATGTAAAATTAGGTATAATTTATTTTACTTACAGTGCTTATGTAATTTCATAACGAAAACAATGTAATCAAAAAAATTATAATACCAAGAAAAGGCAAATTAATAATTTAATGGATGTCAGTGTTCTGAAAGTATCATATTTGTTGGCATGTAGGATATAAGGTATACATACACAATGCATTGAAACTTTATGGAGGCATTTTTTGGGGAAAAAATTACTTGTCATCATATAGTAAAAGTGATTTTTTAAAGTGCGTTACATAAACCATTATATTGTTGAAATAAATATAGTATATCAAAATGTGAGAAGTCCTAAATTCTGATATGCAATAATATTATACTAACCTTGAACAGAAGTATAGTGCACATGTCTAAAAAGAAATGTATTATTATCAGAAATACTGATATAGACAAGGCAACAAAGCCAGAAAATTTACTAGAACTAAAGTCTCATATTAATACTGGTAAAATGAATATATTAATACCTATTATCAGTGAATGTAGAGGTTAAGTAGCTCTAGTACATAAAAACAAATATTTTGAGTAAAAAGTGGAACACAGTGTTTAAATGTGAAGAAATTTCAGCTTACTGATTGTATGCAGTAAAAGCAAGTGTTTTATTATAGTAAAATAACAACCACAGAATTTGAATGAGCTCTAATAAAAACTGTGTCAGTGAGAACCATGGCTAAATAACAACGAAATGTAAGTAAGTTTTGGTCTTCTTAAAACCTGGCAATAATTATTAATAAAGCCAAGTAAGTTATCATATTCAAAACTAGAAA EMBV3_29341 GCAGATGCCAAGCTGAGAAGGAAGTTCTTTGAAACCAAGTTCACAGAGATCAGCCAGCGC Gene GeneID:520408|RNF32:XM_002687056:175_cdna Constitutive 0 NULL GeneID:520408 4 GENE RNF32 NULL ring finger protein 32 EMBV3_28571 CAGGCCGCTTCCTCCTGCAAACGCGGTCTGGTTGTTTACTATGTCATTGGCTGGTCCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17471 ATCTATTGGTCATGTTTTCCCATCTCTGGGCTTTGGATCCGGTGGTTTCCAATCCGTGGG Gene GeneID:783607|KRTAP13-1:NM_001080350:20_cdna Constitutive 0 NULL GeneID:783607 1 GENE KRTAP13-1 MGC155140 keratin associated protein 13-1 EMBV3_06256 GGGAAGCCTGGAGTGCTATAGTCTGTGGGGGTCACAAAGAGTTGGACACAAGTAAGTGAC Gene BVT0102_156457 + 0 NULL GK000004.2:49092516-49230952 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00187309 1 XLOC_113357 NonCoding TCONS_00187309 XLOC_113357 NonCoding NonCoding - 4:49210972-49216751 - TSS139677 5779 4 TCONS_00187309_8 100 0.871950164388303 1 0 3.47157061634258e-06 3.13797790028885e-06 7.20590731995359e-07 7.18476437972114e-07 7.11942870053001e-07 1.09807541372704e-06 3.34131088176685e-06 2.37960038439411e-06 2.44005468531293e-06 0.000976959059967646 0.000498025659062529 0.000328809245159884 6.22005791629898e-05 0.000416887163951829 4.62749266372512e-05 0.000584874678829654 0.000386466951838433 0.00148283383403347 6.71193019971437e-07 7.85318274242888e-06 1.89653209070361e-06 0.000429936733708034 0.000891396459671061 0.000724398138111298 3.32717276519099e-07 1.91052963361608e-06 3.01807783561383e-06 0.000974681029828462 0.000458936649758598 0.000967082216766332 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 863 91.95 0.104862432946877 0 noncoding 0 0 0 0 -0.84139902853958 0.108893530161815 -0.0404406565693177 0.457258585355567 CTTTACACAGTCTTCAGTGATAGTATCATTCTCTTCACTTTACAAATGAGGAAAAGATTTAAAGAGATTAGCCAGTTTCTCCAAGGACTTGAACAAATGAATTGCCAAAGGAGAGTTGGTGACTACAAAGTCTATACCTTTTTCCCTCTAGCACACTATAAACTATTATGCTTTTTTGTCCTTTAATCCTCTTTGCCTAGAAGTCTTCATGACCCAGAAATTACATTTCATTTTTTTTTTAACTCTTCTCTGTTAAAATCCTATCCACTTTTCAAAGATCAATTTATTATTATTTTTGTTTTGACCGTGTTGTGTGATTTGTGGGATCTTAGTTCCCTGAAACCGAACCCTCTGATGGGAAGCACAGGGAAAACACTAATGTAAATAATTGTGGGTTTTTTTGCATAAAGATTTCCCTCAGGTCCCCAGCTCATTATAACCTCTCCCCATTAATATTCCTACAGCATTTACTATCTTTTCTGTCTACTTTCATAGATTTGTCCATTGAAAAAAGTGCAAGCAACCTAAAAATTAAGGGTTACATTTTATTAGGCGGATATTTTTGAGACTTCAAGCTTGGGAGATAGTATCTCAAGTAACCTTGAGAGAACTGCTCTGGAGGAGGCAAGAGGAGGAGCCAGGTTATATAGAAGTTTTGCAACAAAGTCTAAACATTGAAAGATTGTTGTTAATTAGAGAAAACCAGATGACCCAAGTTAAGGAATTTAGCTAGCCCTTTTCTGCCTGTGGGAAGATGCGAGAGTCTGGGCTCTCTGAAATCATTCCTTGGATACGCATCTCAGCCATCTGGGGACTGTGTCTGTGTTTTTCAAATCCTGAGCTTCCTCAGGGCTCACCGTAGGGAGTAGCTGTAGTCTGATGGTTGCTAAATGTCAGGTATTTGCCTTCCTGTGAACCCTCAGGGCTCATGGCTCACACCAAAGGGCTGTAGTCACGGATGACTGTGACATCCTTGTTTCTTGATATGACAGGAAATATTCCATTTCTCAGATTCAACAGTTTTCTGTTTTGCTTTTTCTTTTTGGAGTGTCAATTATGTGCAAGGCACTCTTCTAGGCTTTTGGGAACCATCAGTAAACAAAGCAGAAATCAGCCCTCATGGAGCTTAGATCCTGGCAGCAGAGAACTTTATAAAATAAACACAACAGAGGAATTACAGCACATGTTAGAAGATGGTAAGTGCTGTGGACAAAAATAATGTGGAATCAGGGAGAATGAGAATGAAGGGCCTAGATGGTGTTTATTAGGGTCAGGACAACCCTCACTGAGAACATGACTTTTTTTTTTGATTGAAATTTAGTTAATTTACAATGTTGTTAATTTCTGCCGTACGGCAAGATTATTCACACACACATATATATGTACATTCTTTTTTAGAATATTCTTTTCCATTTCGGTTCATCCTAGGATATTGAATAAAGCTCCCTGTCCTTCCTCACTGGCTCAGTGGTAAAGAATCTGCCTGTAATGCAGGAGATGCAGGTTCAGTCCCTGGGTCAGGAAGATCCCCTAGGGGAAGGCCTGGCAACGCACTCCAGTATTCTTGCCTGGAAAATCCCCATGGAAAGAGGAGCCTGGCAGGTTAAAGTTCACTGGGTTGCAAAGAGTCGGACGCGACTGAAGCAATTTAGCATGCACACACTGCTATGCAGCAGTACCTTGTTGTATATCCATTCTGTATATTAAAGCTTGTTGTTGTTGAGTCACTTACTTGTGTCCAACTCTTTGTGACCCCCACAGACTATAGCACTCCAGGCTTCCCTGACCATAAACTGATGTCATCATGAAGGGATTTAGTGCTTTTTTAGATATGAAGAGATATAGGGACTGGGATCATGAACTCTGTTCCTGAAAATACCTAACTATCTAAAGACCTGCTTCACTAGATTCCCTGAAGCACAGCGTGCCTCACTCCACCCTGAACTCCCTTAGGGAGTGTTGAAACTCAACAGCTGCAGCAGCACAGGGTTCAATCTCTGTAGAAGTAAAGTGAAGTAAAAGTCGCTTAGTCAGTGTCTGACTCTGCGACCCCACGGAAGATCAGTTCAGTTCAGTCACTCAGTCTTGTCTGACTCTTTGTGACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCTATCACCAACTCCTGGAGTTTGCTCAAACTCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCTTCAATCTTTCCTAGCATCCAGGGTTCTTCACATCAGGTGGCCAAAGTGTTGGAGCTTCAGCTCCCTGGAATTCTCTATACAGTCCATGGAATTCTCTAGGCCAGAATACTGGAGTGGGTAGCTGTTCCCTTCTCCAGGGGATCTCCCCAACCCAGGGATGGAACTCAGGTATCCCACTTTGCAGGCAGATTCTTTACCAACTGAGCTACCGGGAAGCCCAGTCTCTGCAAAAGGAAATGGCAAATGCCCTTGTTGTTCAGTTATTGGCAATGCTCTTGGCAAGCACCAATTTGTAGTTGAAGTTGTCACACGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGCGACGGACATTAAAGCCCTTGGTGCGTCACAGCTCTTAGGTCTTGGACAAACCGTGCTACAGCTCTTAGGCAAATCAGTGTTACAGCTCCATTTGATTTAGAAGATAGCAGGAGAATCCAAGACTCAAAAAAAAGAGTGGAGGAGTACATGGGGCGGGTGGGAGGGGGGGAGAGAGAGAGAGAGAGAGCGCACGCGCACACGCACGCGGAGAGAGTCAGAGAAAGCGCTTTGGCTCCTCCTTTTATGTTTTTTTCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAGTGCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTCGGACCTTCCTTTGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTATTCTACCTACCTAACATTCCCCCCTCAAGAGGTGGGAGGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGACAGCAAGGGGTATTGGGCCTCCCCCTCTTACTAGTCTCAAGCCTCAGAGTCCTTATAGTGGTGTCCAAGGGTGTGTGATATTTTCCGTGGTCGGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTGGTTGACCTGGGCAGAGACAAAACAAGTTAGCCAATATTGACAGTACATGGAATAATCATAAGCATCATCAATATAGCATAACAAAGACTAGTAGGGGCATTAGCCAATTTTAAATTCACATCGCCAGGGTGGCTCAAGTCCCTCCTTGTTCAGGGATTAGAAGATATATCTCCTGTCTGTTTTGGAGTACAATCTCTGTCAAGCTGTGTTGGCTCTTTAGAGTTATCCTGAGAAATTTTATCCCCAGAAACCAGATTTTGGGGGTGTTCATTAGAATGACACTCATTGGTAGTCCTGAATAGGTATCTGAGAGCTCCCAGGGGCTCACAGGTGTATTGAGTGTCCTCTTCTGTTTTCTTCCACGGCTTGACTTGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCTGTGGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAGTTGAGCCTTTGGGGATCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCCTGGAGCATATAGTGGTGACTCTTCAGAATCTTTTGGGTCCTGGTTCATACCCCACAAGCATATATCCTGTTGGAATTGCCCAATGGCTATGGTATAAGACGAGGGGGGTCTGAACCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTCATAAGGACTAAGACCAACCTGTTCCTTAGGGGCAATGAGGGTGCGGAGGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATTGCTGATTTTAAGAATTGATTGGCTCTTTCTACTCTTCCTGAATATTGAGGCCTCCAGGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACCCCTTGGGTGACCTTAGAAGTAAGTGATGTCCCATTGTCACTTTGTAATGACCTGGGCAGACCAAATCTTGGAATGATTTCATGGAGCAGTTTTTTTACCACCTCCTCAGCCTTCTCAGTCCAGGTGGGAAAGCCTTCAATCCATCCTGTGAATTTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGTATCTGGGCGAAGTCCATCTGCCAGTCCTCTCCTGGGTAGGCCCCACATCGTTGGACGGGCTGGGCCAGCTGGGGTCTTCAAGCTCCTTAGGGGTTGTTTAATTGGCAAGTGGGACAAGAGGAGACCACCTGTCTTACAGTTGTTTGGAAGCCGGTTCCTCTGAAGGACCTTTCTAGTAATCCTTGGAGGGCCTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTCCAGGAAGAAAAAAGAGTCCCTCCTTTTGGAACCACCTCATATGATCTTCTTGAAAGCCCTCGCTCTTAGCTTTAAGAGTCTCGCCTTCAGTATATGAAGGAGTTTCTGGTAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGATGCTTGGTTCCCTCGTGCCACTTCAGTGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGTAGATGGACTGCCTCCAAGAGTTGAAGAATCTGATCACCATATTTGATTGGGGACCCTCAGGTGGTCAAGTGGCCCCTTTCTTTCCAAACAGCCGAATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCACACCCAGCTCTTCTTTTTCCATCCAGGACAAAGCTGCTTCCATCAGAGTACCAGATTTCCTCAGGATTGGTCAGAGGATCTTCTGACAATCCCTCTCGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAACAGTGACACGGGAGAGAGCCCTCGGGGGTAGGGAGGAAGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGATTTTCCATCAGCATTACTTGATATCTGAGGATTCTTTGATCAGATATCCATAAATGGCCTCTCCCATTTAGGAGTTGTTTACTTGGTGGCTGGTAAAAACAGTTAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCGAAGGCAGGGGGGCCAACCTCGGGTAGTTTGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATTCCAACCTTTGAGTTAACACTCCCAAGGATATTCCCTCTCTTTCATGGACATTAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGCAGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCCTCTGCCTTCTTTTGCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCATGGTAGGCTGCAGTC TCONS_00181574 TCONS_00181575 TCONS_00181576 TCONS_00181577 TCONS_00181578 TCONS_00181579 TCONS_00181580 . 5' 14202 TCONS_00181574 TCONS_00181575 TCONS_00181576 TCONS_00181577 TCONS_00181578 TCONS_00181579 TCONS_00181580 . 5' 14202 EMBV3_16665 CGTGCGAAGGCAGGTTTGCAGCGTGTCCATGTTAGGAGATTTGTAGCCCAGGGTAAATGT Gene GeneID:507572|CHMP4C:NM_001045976:21_cdna Constitutive 0 NULL GeneID:507572 14 GENE CHMP4C MGC138046 chromatin modifying protein 4C EMBV3_25594 TGGTGCGCCTCCAGCTGTGGGATATTGCAGTGTGATCTATCCCCTTGGGCAGTGAGCCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12549 CGACCAGAGGCTCGAGGCCTCTCCCCTGGGCTGCCCCTTGGCAGTAAAGTGGTAGTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03665 CCGGAATAGGTCCCTCCCCAAGTAGCTGTTCTTCTATGTTATGACATCGTTCAAGGTTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15403 CCAAGAAAAACTTGGTGCGGGGATTGAACAGAGAGCCCTGGTTAGCTGGCCAAAGTCTGA Gene BVT0102_172866 + 1 EMBV3_10498 GK000008.2:63729125-63772479 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227967 TCONS_00227966 TCONS_00227965 1 XLOC_138379 Coding TCONS_00227967 XLOC_138379 Coding Coding TBC1D2 8:63768851-63814993 j TSS170078 6743 1 TCONS_00227967_5 857 0.115823817292007 13 0.854142736394963 7.36139092586454e-07 1.08650414538606e-07 9.28046940276285e-08 2.47156433748058e-07 1.31751965890059e-06 2.50678750363567e-09 8.606632360888e-05 1.2679703363717e-05 0.000135595357632397 2.727977839316e-05 1.78843930080177e-12 2.33706427628927e-13 1.03932100917855e-08 4.17514531526065e-11 1.07768158948324e-12 1.01312180133153e-08 1.76868946280827e-20 2.9268007728254e-09 2.53249103940401e-05 3.20640291143138e-07 2.9354999678806e-08 8.22700302047584e-09 2.62010344131087e-08 2.20767309809761e-08 0.000746156394894721 5.17983490719691e-07 0.000599037671507155 8.44504043299211e-13 1.54966491076776e-08 4.03490197408013e-12 NM_001101981.1 TBC1D2 Bos taurus TBC1 domain family, member 2 (TBC1D2), mRNA. 0.0 5606 99.87 0.461812249740472 NM_001267571.1 TBC1D2 Homo sapiens TBC1 domain family, member 2 (TBC1D2), transcript 0.0 3267 82.57 0.460477532255673 TCONS_00227967_5 sp|A6QP29|TBD2A_BOVIN TBD2A_BOVIN TBC1 domain family member 2A; 0.0 1761 100.00 0.998833138856476 2 coding 0 0 1 1 -0.104556842130539 0.56449456689099 0.014280722576115 0.790537393916262 CACTAACCTCCAGTCCCTCTGCGATGGAGGGCGCGCAGGAGAGCCCCGCGGAGTCTGGTTCCTCCGTCCCGTGGTCCGAAGAGCCTGCTGGCTCGGCCAAGGTTCCCGAGGTGTCGCTTTCGGAGGAGTCGGAGGGCTGTACCCGGCCCCTGGAGGCGACCCCCCCAAAGCTTTGTGGATATTTAAGTAAGTTTGGTGGCAAGGGGCCCATCCGGGGCTGGAAATCCCGCTGGTTCTTCTTCGACGAGAGGAAATGTCACCTGTATTATTCGCGGACCGCGCAGGATGCGAATCCGTTGGACAGCATCGACCTCTCCAGTGCGGTGTTTGATTGCAAGGCGGACGCCGAGGAGGGGACTTTCGAAATCAAGACTCCCAACAGGATAATTACCTTGAAGGCTGCCACCAAGCAAGCGATGCTGTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGAGTTCCACAACAGCCTGCCTGCACTTCCTGCTGCCCACGACGCTGCCCTGGCTGGGAATGGGCCTGCCCTGCGCCTTGAGCTAGAGCAAGAGGAGGAGGAGGAGGAGGCGTTCCTGTGTCCCGTGAAAACGCCCACTGATCTTGTGGGTGTGGCAGCTGCCTGGCAGCCAGTCCATGCCAGGCCTTTGGCCCTTCAGAATATTTCCCTCAAGCACCTGGGAACTGAAATACAAAACACAATGTGTAACATCCGGGGCAACAAGCAGACCCAAGGAGCAAACCACAGACCCCCCGGAGAAGATTCTCCACTGATCGAGGAGACGCAGAGAGAGGAGCAGCCCTCTCCCCCTGGCCCTGGCGCCCCAGGGAAGGATCCAGCAAATTCTCTGAAGTCCTCTCTGACCACCAGTCTCATTCGGAAAGCCAAAAGCCAGAGCAACACCTTCCCGCTCTTCAGTGAAGGGCTCATGCGGAACCGAACTGCCCAGGAGAAAGTACTGGCCTTGGAGCAGCAGGTTCTGATGCTCACCAAGGAGCTAAAGGCTCAGAAGGAGCTGGTGAAGATCCTGCACAAGGCGCTAGAGGCAGCCCAGCAGGAGAAGAGGGTGTCCAGCGCATACCTGGCAGCGGCCCAGGACAAGGACCGGCTGGAGCTGGTGCGTCACAAAGTGCGGCAGATTGCGGAGCTGGGCCGGCGGGTGGAGGCCCTGGAGCGGGAGCGGGAGAGCCTGGCGCAGACAGCAAGCCTGCAGGAGCAGGAAATACGGGAACTGCAGCAGCACGTGCAGCTGCTCCTGGACAAGAATCAGGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGTCACCCAGGACTTCATGAAGGCCCCAGAGGAGGCTGACAGGGACTTCCTGAGCCAACAGGAGAAGATGGAGCACCTAAAGGATGACATGGAAGCATACCGGACCCAGAACCGCTTTCTCAACTCTGAGATCCACCAGGTCACAAAAATCTGGAGGAAAGTGGCTGAGAAGGAGAAGGCCCTCCTGATGAAGTGCGCCTACCTCCAAGCCCAGAACTGTCAGGTGGAGAGCAAGTACCTGGCAGGGCTGCGGAGGCTGCAGGAGGCCTTGGGGGTGGAGGCCGGCGAGTGCTCGGAGCTCCTGAGGCAGCTCATCCAGGAGGCACTGCAGTGGGAAGCCAGCGAGGCCTCGGCCGACAGCGTCGTGCTCAGCCCCAGCACCATCAGTGAGTATGACGAGTACGGCTTCCTGACGGTGCCCAACTACGAGGTGGAGGACCTGAGGCTGCTGGCCAAGATCCAGGCACTGGAAGTGCACTCCCACCACCTGCTGGCCCATGAGGCCGTGGAGCGGCCACTGCGGGAGCGCTGGGCCACCCTGGGCGAGCTGGCCCCCTCGGCAGAACTGAAGCAGCTGCTGCGGGCGGGCGTGCCCCACGAGCACCGGCCGCGTGTTTGGAGGTGGCTGATCCGCCTCCGAGTCCAGCACCTGCAGGCCCCCGGCTGCTACCAGGCGCTGCTGAGCCGGGGCCAGGCCTGCAAGCACTCTGCTGCCCGCCAGATTGAGCTGGACCTGAACCGGACCTTCCCCAATAACAAGCACTTCACCTGTCCCACCTCCAGCTTCCCTGACAAGCTCCGCCGGGTGCTGCTGGCCTTCTCCTGGCAGAACCCCACCATTGGCTACTGCCAGGGCCTAAACAGACTGGCGGCCATCGCTCTGCTGGTCCTGGATGAGGAGGAGAGTGCCTTCTGGTGTCTGGTGGCCATTGTGGAGACCATCATGCCAGCTGACTACTACAGCAAGACGCTCTTGGCATCCCAGGTGGACCAGCGGGTGCTACAGGACCTTCTCTTGGAGAAGCTGCCCAGGCTGATGGCCCACCTGGGACAGCGCCACGTGGACCTATCCTTCATCACCTTCAACTGGTTCCTTGTGGTCTTTGCAGACAGTCTCATCAGCAACATCCTCCTCCAGGTCTGGGACGCCTTCCTCTACGAGGGCATCAAGGTGGTGTTCCGCTATGCCCTGGCCATCTTCAAGTACAACGAGGAGGCACTCCTGAGGCTACAGGATAGCCTGGAAATCTACCAGTACCTGCATTTCTTCACCAAGACCATCTGTGACAGCCGCTGATGCACATTGCCTTCAATGACATGAACCCCTTTCCCATGAAACAGCTGCGCCAGCTGCGGGCAGCCCACCGGGAGCGGCTGGAGGCTGAGCTGAACGAACTGGAGCAGCTCAAGGCCGAGTACCTGGAGACCCGGGCAGCCCAGGGCCCCGCGGTGCCCGAGGGTTCCCCGAGTGAGGATGAGGGGGAGGCAGAGCCCTGACATGGCTGCCTGCCCACCCCAAGCCCTTTCTCACCCTGGGCTGGCAGGCCCAGAGAAGGACGGCCATGCAGCGATATGTGACCCTCAAGTCCCTTCTCCTCTGTGGGACTCAGTCTCCCCATTGAAACGTTGGCTTCTGAAGCCACTGATTGGGTTTTCTCCTCATGAGCACCCCTTCTCACTTCCTCCGCAGAGCACTGTAGCACCCAGACAAGCAAGAGTGCTGTCTTTATAGGGTTAACCTTGAACATTCTCTAAGTTTTATCTGTGTATAACAGTGTAAATACTGGAAATAGTTCACAAGCTCTGGAACCTAAACAGTTCTCAGTAACTGGTTGTTCCTGGGTGGGCCTGGGGCTCCAGGATGTCGCACCACCAGGGCCTTCTCAGCCTAGGACGTCTCTGGCTGCTGTTTCTCATGGTGTCTCTGCAGGGCCAGTCCTGGTTCCCGGAGGAGCTGAGTCCATATGCATTTACAGCTCCCGTCTTTGTGGGCGACAGCGTCTCTCAAATACTGGTTGGCCTTTTGATCCAGGCCCAGCTCCCACCTACCCGTTTCCTGGGCCTTGCACCTACCCTCTCCTTTCTCCTCACAGCCCATCTTGGGTGTTGGGGGGTTTCTAGGGAAACCCCTGTCCACCACCAAGAAAAACTTGGTGCGGGGATTGAACAGAGAGCCCTGGTTAGCTGGCCAAAGTCTGATCTCCCACCACCAACTTCATAGTCAGGGGCAAGAAGGGTCACCTCTTTGAAAACTGGGTGGTTGGGAGAGAGAGAAAAAGGTGGTGAGACAGACAGAGCCTGCAGCCAGGTCAGGGCTAGCTTGTGCAGAACTCAGCTCCAGTTCTTCTGGGCTCTTCCAGGCCCTTCCTCAGCAAACAGGCTTCCCCCATCGCCCTCCGTGCAGGGGGTCGAGGCTGCACAAGTGATGTGAGCAGCTCATTCCTCAGCAAAGCCTATGACTGTCTGCCAGACTAGCCTTGGGCTCAGCAATCTTTGCTATGAGGGACTAGGGTAGGGCTTCTCACAGAAAAGCCTCCTGCTCTGATCCAAGTTTCTTTTCGAGGCTTGGGAGGGAGGCCACACCCATTGCTGGGGACAAGGGACAGGCCCTTTTCTCACCCACCAGCGTGAACTTGGCGGGGTTGGCGCACCAGACCCCTTGTTCCCTCCCATCACCACCCCCACCAGCCCCAGGGAGAGGACCCTCAGGGTTCCTTTCCTCCCACATTCATCAGGGCGGCTGTGAACACTACACCAAGGCTTGATGGCCTTTTCATATTTGCCAAACTTATTCGTCTGCTGAGGTCCTTTCACCACCAAACAGTAACTGAAGCATGATGGTGGTCTGAGGGCAGCCTGGGGTGGGGGGGTCCTGGCTGCACCCCCAACAGGTTGCAGGCTGTATCCCTCAGGGCCATCACCAGGAAGACTGGGCGGTCTGGCCTCCTGGAACGCCGGGAGGGTTAAAGGAGATGACGCTGGTGCTGCGTCTGCTTGCCCAGCAGAGTGAAGCACACAGCCTTGGCAGTGAATGGCCTTTTCATAAAGAAGGTATCACCAGGAAGGCCCTGAGGGCCAGAAAAGGCCCCCGGTTCCAGCAGAGACTGGGTCCAGCTGGTCCCTCTGACTCCAGCCTTTAAAACCAGATTCCCTCCTTGGCAAAAATACAGCACGTGACCCCAGCTCAGACCAGGGCTGCTGGACAACGCACCCCCACCCCTCGCCTCCCGTCTGCCACCCGCCTCTGCTCCCACCTCCCTTTCCTCCTTCCCTCATCCTTTGTCTTCACTTGTCTTCCCTCTGCTTCTCTCCCCGCCCGCCCCCACCACACACACACCACGCCCAGGCAAAGAAGTTCTGCCCAAAGTTGAATGTCTGTCCCCTCCTCCTCCTTCACTGGGAGGGGTGGTATTATGCAGCTGACCCAGCACTGTGTCACCTCTGGTTCCTACCTGGCTGCACCACAGTACCACCTGGGTGCTGGGTCAGAGCCTGTTGTGGGGCATGGGTGTTACGGTACAGCGACAGGGTTGGGGACCACAGGCAACGAGGACTGACTAGTGGGGCCTCCGGCCTTGTATCGGGGAGCTGGAGCGAGAGCCAGGAATGTGAACTGCCTGTCCTAGAGCACCCACTCATCCGACAGAGCTCGGTTTACAGATGAGGAGACGGCTCAGAGAGGTTAGCCAACTTGCCCAAAGTCACAAAAGCCACAAGTGTTTAAGCCATGCTTAAGCCTTAGAGGCTGCTAACTGGAAAATCCAGGGAGAGCTCCTCCAAGCTAGAACACCTCCCCCAAGAACCCAGGAGAAAGGGCAAGCTTGGCCTATGGCCCCCTGAGCCGTGAGGGCGAGTGGGGATACCCCAGGCAAAGGAAAATGGGAGGAAGAACCATCTACCTGACAAGGGAGGCTGTAGCAGGGACTGGGGTGGGGGTAGGGGGGCCGAACTCCGAGAATCTCTGGGGCGGCTGCTGCTCCTTGGGAGCCTGCCCACCCTCCCTCAGCTCTTCCTGAAAGGCATTTGGGGCCCAGCCCCAGTGTCAGGTTCCTGGCCCCGCACCACAGCTGTCGCCCCCACCATCCCCAGGGATTGTTGCCTTCCTGGCTGGAGGATCTGATCCCTCACAGCCCCACCTCCCTACCCCAGGGGTGGGCCCCCTAGCTCAGAGCATCCCTCTCCCAGACACGAGGCCCCCAGCAATCAGGACACGCTCCATTCTACAGGTGAGGGAAAGGAGTTACCCAGGGAACCTTCCTGGGCAATATCCTAAGAATAAAGGGGCTCCTCAAAACAGCAGGGGGCCACTGTGGAAGATCTGAACCCTAAAGTGGGAGATACATGCTAACTTCTACAGGATGCCTGTGTTCAGGGTGCTCTCCCGCATGTTCAGAACCTCCCCCTAACCCTGATCCTCCCAGGCACAGGTCCCCTCCTTCCTCAGCTCAACCTGCCATGAGCACAGGACCACATGGTACAGAAAGCTCCATGCTGGGCAGATAGGGGAGAACTTGCCACTTTCCCTCACACACATGCAAAAACAGGTTCTTGTCACCCAGAAGACATTTACCTACATGTGGCAGGTTAAATTTTAAAAGAAATTTTGGCCATACCGCACAACATATAGGATCTTAGTTCCCCAACCACCGGTTGAAACTTGCACCCTCTGCCTTCAAAGTACACAGTCTTAACCACTGGACCACCAGCAAAGTCCCAACACACAGCAAATTAAACAAAGGCCATGCTGACACAGGAAGGTGTTGGATTTCTGGCCTATCTCAATCAGCAATAAGGCCCAATAGAAGGTCCTGGCAGATGGACCCAACTTTGGGACCAGACCTATTGTGTGTTTCCTAGCTAGAGACCCCTGGATAGGTCATTCCCGTTCTGGCCTCAGTTTCCCCATGTGTGCAATTCAGATAGTCAGCCGGTGTTGTTGATGTTCAGTTGCCCAGTCATGTCCGACTCTTTGCTACACCATGGACTGCACCATGCCAGGCCTCCCTGTCCCTCACAAGTTCACATCTATTGCATCCATGATGCCATCCAGCCAGCTATCTTATCCTCTAACACCCTCTCCTTCTGCCCTCAGTCTTTCCCAGCATCAGGGGCTTTTCCAATGAGTCAGCTGTTCACATCAGATGACCAAAATACTGGAGCCTCAGCTTCAGCATCAGTCCTTTCTAGCGAGTATTCAGGGTTGATTTCCCTTAAGATTGACTGGTTTGCTCTCCTCGCTGCCCAAGGAACTCTCAGGAGTCTTCTCCAGCACCACAATTCGAAGCCATCAATTCTTTGGCGCTCTGCCTTCTTCACAGTTCAGCTCTCACAACTGTACGTGACTACTGGGCAGGTAGTCTTCATCAAATGGATCAGCGTTACGGGGATGGAAGGGGAAGGGGGATAAGCACACCTACACAGCATCTCTAGGAAGAGTCCTAGG EMBV3_23915 CAGATGCAGATGATGAAGATAATTACGGAGCCAGACTGAAGCCTAGAAGGTACCACGGCC Gene GeneID:781683|FAT4:XM_002694393:23_cdna Constitutive 0 NULL GeneID:781683 17 GENE FAT4 NULL FAT tumor suppressor homolog 4 (Drosophila) EMBV3_40987 TCTTGTCTGCTTTGGATCTCGCAGCCTGGGCTTCCTGGTTGGGAACGATGGCAGGGTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04666 CATTGCAGCTCTTTGAGTCCCATGCAGGGCATCTTGGCCCACAACTCTTCAGTAAGTTTG Gene GeneID:504914|UROD:XM_002686429:405_cdna Constitutive 2 NULL GeneID:504914 3 GENE UROD NULL uroporphyrinogen decarboxylase EMBV3_18613 AATACTGGATTTGCAAGCACCCATCATGAGCAGCTTCATGGAGTTTGGCCACAAGATGTT Variant GeneID:506005|LOC506005:XM_002689601:2_cdna 674^953 3 EMBV3_07429 GeneID:506005 8 GENE LOC506005 NULL similar to KIAA1432 EMBV3_07155 GGAGTCCTTCACTAAAGAGTGAGTGCTGAGCTGTGTCTCAGTTTATCCATGATGCCCAGG Gene GeneID:616948|TRIM6:NM_001034798:359_cdna Constitutive 0 NULL GeneID:616948 15 GENE TRIM6 NULL tripartite motif-containing 6 EMBV3_18256 GCCCATTTTCAGAAACAGCTGTCCGCAGAGGAAGGCTTTACGATCTTGGGTGGTCAAGAA Variant GeneID:768008|TMBIM1B:NM_001077068:16_cdna 351^429 1 EMBV3_32198 GeneID:768008 4 GENE TMBIM1B MGC134563 transmembrane Bax inhibitor motif containing 1B EMBV3_23195 ATAATGGACTGGCTGGAAGTCTAAAGGGGGAGGGGAAGGGCAACAGATAACTCCGAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38805 GTTCTGGGCTGTGGAGAACATTTAGGGAACTGATTACTGGCTAGGTCTGTCTCTCGCCTT Gene BVV0102_143197 + 1 EMBV3_30685 GK000030.2:82294468-82351213 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023646 TCONS_00021036 TCONS_00251960 3 XLOC_014313 XLOC_011710 XLOC_154901 NonCoding TCONS_00023646 XLOC_014313 NonCoding NonCoding - 10:104108175-104109063 - TSS17536 888 3 TCONS_00023646_2 68 0.996621621621622 1 0 0 0 0 0 0 4.02821816122904e-07 0 0 0 0 0 4.29893868962395e-05 0 1.32431933609243e-06 2.02583360789158e-06 3.71784806495491e-06 0.00191013577704982 0.00122063614623734 0 3.50932343681453e-06 0 1.19380260028846e-06 0.000294436314721643 5.66374094866691e-05 0 9.91761517468598e-07 1.19499741920863e-05 4.44684141578623e-05 1.14804724406246e-05 1.12842431946245e-06 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 2e-22 111 68.22 0.402027027027027 0 noncoding GTTCCTCTTTATTGTGGAGGTTCCTCCTTGTGGGTGGGGTTGGATGAGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCAGTGTTCTGGTGGGTGGAGCTGGATCTCCTCTCTCTGGAGTGCAATTAAGTGTGCAGTAGTGAGTTTTGAGGTGTCTATGGGTTTGGTGTGATTTTTGGGCACCCCTATTTTAATGCTCAGGGTTATGTTCCTGCATTGTTGGAGAATTAGCTTGGTATGTCTTTCTCTGAAACTTGTTGGCTCTTGGGTAGAGCTTGGTTTCAGTGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCAACTGATGTTCCCTGGAGTCAGGAGTTTTCTGGAGTTCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGTCTCAAGACTTCTCTATCCATACAGCACTGATGATAAAACATCTAGGTTAATGGTGAAAAGATTCTCCACAGTGAGGGACACCCAGAGAGGTTCACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGGTGACCAGGAGGAGAAGAGGGGGAGTCAAAAGGAGAGAGACAGATCTAGCCAGTAATCAGTTCCCTAAATGTTCTCCACAGCCCAGAACACCCAAAAAGATTCACAGAGTTGGGTAGAGAAGAGAAGGGGGAGGGAGGAGATAAAGGTGACCTTGGGGAGAAAAAGGAGAGTCAAAAAGGGGGACAGAGCAATCAAGCCAGTAATCACACTCCTAAGTAAAAATGGGTACTGAAGATTGGATTCTTAAAGGTACAAAATTGATAACAAAAACCAAAAGGCAAAGATTAAAAATCTAGAGTAGAGGTTAGACTCTCAAAAATACAATATTAAA TCONS_00018597 . 5' 8990 TCONS_00018597 . 5' 8990 EMBV3_33352 GGGAGCTCTTCAGCCCAGTTTTGTGTGGACAAGCTGCGAACTAAATCTCCCTTCAAAGTC Gene GeneID:510320|LOC510320:NM_001101924:619_cdna Constitutive 0 NULL GeneID:510320 4 GENE LOC510320 MGC151581 hypothetical protein LOC510320 EMBV3_35576 TGGTGGCTGACCCTCAAGTTTCTGAACACCGCATCTGTACATACCTGTGGCAACTGGCAG Gene GeneID:541135|KIF15:XM_002696880:319_cdna Constitutive 0 NULL GeneID:541135 22 GENE KIF15 NULL kinesin family member 15 EMBV3_05259 GCCTAACCTTGTTTCCCTTTGTGTCCATCTGGATGCCCCTCCCCATATTGTCCCAGCGCT Gene BVT0102_325803 + 0 NULL GK000007.2:45784174-45789551 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216865 TCONS_00216867 TCONS_00216866 1 XLOC_131363 Coding TCONS_00216866 XLOC_131363 Coding Coding KLF16 7:45787554-45790747 j TSS161640 2564 1 TCONS_00216866_1 105 2 0.197368421052632 0.00414708275845897 0.00103430840490399 0.00251164246109532 0.000599064664988377 0.000642170973498097 0.000743517737042293 1.84419987130631e-08 0.000574232480910363 3.1639240489103e-08 0.00121537210994972 1.45726069248326e-08 0.000180512782975331 1.83759014749893e-08 0.000707355529080163 2.86116855322664e-08 0.0020675158678803 2.81368331858628e-10 1.56109717224845e-07 0.000233647900452738 0.00157316890233508 2.52186256240068e-09 2.4213935779395e-08 5.65009145100574e-08 0.000451226656703674 0.000604518834991391 0.000117293226082227 0.000793920859076687 6.21452884643052e-08 3.16838610639773e-08 3.89006956872899e-08 XM_597376.6 KLF16 PREDICTED: Bos taurus Kruppel-like factor 16 (KLF16), mRNA. 0.0 4280 100.00 0.925117004680187 NM_031918.3 KLF16 Homo sapiens Kruppel-like factor 16 (KLF16), mRNA. 4e-150 536 70.60 0.459048361934477 TCONS_00216866_1 sp|P58334|KLF16_MOUSE KLF16_MOUSE Krueppel-like factor 16; 6e-53 170 95.29 0.8 3 coding 1 1 1 1 0.112550691111337 0.568481440518233 -0.0146002312831162 0.936991946798348 CCGCCCCTTCCCGCGCCCGAACCCAGGGGCAATCCCCGCCGCGCCTTCTGACCCTTTCCACCCTGCTAGCGCGGCGGGGGGTTGGGGGTGTCCCTTCACATGTTCCTCTGCTCGTAGAGGGCCACAAGGGTCAGTGGTGGCGTCAGGCACGGGAAACCGCCCAGATGATGCCCGGCACCTGCGCCCCTGGTGGTCATTTCCCAGAGGAAGGGGCTTAGCTGGGATCGCCAGCACCTGGGAGCCCTCGGAATGCCCCACAGGAAAGGTGAGCGCCCCTTCGCTTGCGACTGGCCGGGATGCGACAAGAAGTTCGCACGCTCTGACGAGCTGGCCCGCCACCACCGGACGCACACCGGCGAGAAGCGCTTCCCCTGCCCGCTCTGCTCCAAGCGCTTCACCCGCAGCGACCACCTGACCAAGCACGCGCGTCGCCACCCCGGCTTCCGCCCGGAACTTCTCCGGCGCCAGGGCACCCGCAGCACCTCGCCCAGCGACTCGCTGCCCTGCAGCCTGGCGGGCAGCCCTGCGCCCAGCCCAGTGCCCAGCCCGGCCCCAGTCGGCCTGTAGAGCCCTGTTCCAGCCGCCCTGAGTGCACCCCCGCTGGGCCTGGGCATGGAGCACCAGCAACCCGCCTGCTGTCCCGGGCCCTGGTGGGGCTCGGATTGACTGCCAGACCAGCCCCTTCCAGTGTCCCCCTGAGGGCCCCCCCGAGTTGCCCCTGCCCCCTCGAGAAAACCAGGAGGGGGCCTGAGACTGGACCGGGGTCATCTGGGCCTTGGAGGTTGCTCTCCGGGAGGAGCATGGCCCCGTGTCTGTACATAGCCATGATGTTAACTCTCTTCCCAGCTGTTGAACAGGGACCCTAGGTGGGGGGCCAGAAGGCATCCCTTCTCCCTCACCACCTCCCTGCTTTGGGTGGCATGTGGGCCTTGGGGGGAGGTGCCCCCAGGAAAGGCACCCCCTAACCAGCGTTCAGACCTGGCCCCCAGGCCCCTCTCTCCAGGTTGGGATGAAGTGTGCAGAGCCATAGGTGAACTAGGGGTTACCGCGTGGGCTGCCTCTTGTCCCCCCATACCCCGCCCCGGGAGCCCTTCACCCCATCGAAAGCCATTGGAGATGTTCAGGGAAACAGGGTGCGGCCTGGCCGCCCCATTCGGGTACTCAATCTCAGGTGTCCACACTGGCCCACTGCCGAGGGAGGGGCCCCTCAGCTCCCCAGCCGCCGGGGCGGGGTGGGGGTGGGGGAAGTGGTAGGGTCTCTACAAGGGGTCCTGATTTGCTTCTGAGACTTGGGATAGGGAGGGAGAGAAATAGGGGTTCTTCCAAAGAGCAATTAGACTCACTTGGGGGGTGGATATCACGGGATATGAGTAAATGCAGGCTTATTTATTGTTCTCTGTCTGCTGGAGTTGGGGCTGCACTGCCCCTCGCTGGGTGGGTGTGCGATTGTGTGAGTGAGAGACTGGGAGAAGCTGGTGCCATCGCCGGCCTCCCTCCTGCAGGGGAAGAGTCCCCGACACTGGCCTTGAGCAGTATCATGTGACAATCAGTCCCTCCTATTTGGACCAGAACAGCCTTTGGGCCAAATGGACCCCTTCCCAGCACTGCGGATGGGGGCGAAGAGGCCCTGGGCCCTGGCTCCATCCTGCCCTCCTGGTGGTGGCAGCAGGGTGGCCCCTGGACCCGCGGTTGAGGCCCCACCCACGGGGGCGGGAAGTATAGCTCGATTTTTTTTGGACCGGGTAGAATATTTTTTCAGGCTCCAATCCCTTCCTTGATCTGGGCCCCTGTGGGTGGTCTGTTGTCCTCAGGGGTTGTGGGTGTGGGGGGAGGATCTTCGTGGTCTGAATTTAGGGTAGGGGAGGGATAAATGCCACATCCCCTCCTGGGGTTCTCCCACTGTGGCTGAGGTTGGATTTCATTTTGGAGAGAGACTGAAGACCCCGGCCTTGGAATGGGAAGGGACCCAGGCTCCCTGTCCCTTACCGTGAAAAGGCCTATTGCATAGCCTTTGGCTGCAGATCTGTGGCACCCTCCCAACCTGTTCCAGAAACTTCCTGTCTCCCAGTAGGGGGCTGGGGCGTTTGGACGGCACTAGTGTGGACCCAAACCGGCCCTGGCAGGATCCAGGGGCAGCGCCTAGGGTCCCGGGGAGGGGGCTGCGCCATGGTGAGATGCCTTAGCCCTAGCCCGGGGTGGGGAGGGAAGTGGGGAGGGGTGGGGCGGGCCTAACCTTGTTTCCCTTTGTGTCCATCTGGATGCCCCTCCCCATATTGTCCCAGCGCTGGCCGGTGCTTGTCCACAGGAGGTGGACTGTGGTCTGAGGACCCAGGGAGCTGAGAACTTGCCCCTCCGCCCCTCCCCAGTGTCCGGGGGCCTGAAGGGACCGGTGTTCACCTGGACCTGGTTCCAGCCATTTAACTGTGGCCTCTAGAGGTGGGTGGACGGGGAGGGCCCCAAGGGACTTTGCTTTCGGGTGACTCCCTCCCCCCTGTCCTGCCTGGCCTCATCCTGGTATTTAATTAAACAAGTCTTTTTTAAACCCGATTCCGGAGACTGTGTGG EMBV3_39679 CTCCGCAAGGAGCGCATTGTCACCCTCTTCCTCAGCCACTGGAAGAAGTCGGCTTACATG Gene GeneID:524380|ESPNL:XM_002686577:32_cdna Constitutive 0 NULL GeneID:524380 3 GENE ESPNL NULL espin-like EMBV3_34188 GGAATTCAGATGACCCCAAACTCAGACAGGGGGAGGGACTATAATGCTAGACTAAGTGTT Gene GeneID:533687|RHPN2:NM_001083470:676_cdna Constitutive 1 NULL GeneID:533687 18 GENE RHPN2 MGC137880 rhophilin, Rho GTPase binding protein 2 EMBV3_27487 AGGCATCGTGGTTCCAGAGAGCACACTAGGGGTTAAGCTTTTCATATAAGTCGGCTCAGC Gene BVV0102_094472 - 0 NULL GK000003.2:92100052-92107363 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170656 1 XLOC_103626 Coding TCONS_00170656 XLOC_103626 Coding Coding PARS2 3:92097448-92103474 = TSS127458 5040 1 TCONS_00170656_5 475 0.130357142857143 2 0.163817427385892 0.000612156764930262 0.000370774542528521 0.000558708221680935 0.000696956024072155 0.000228277268841179 0.000163238518509397 0.000329765005306721 0.00028869435328795 0.000731090368891849 0.000316750347602853 0.000336177148994539 8.37162137184303e-05 1.65902002942954e-05 5.13332465791518e-05 9.25430670996032e-06 0.00113976830078578 0.000732936812265981 0.000359092518913564 0.000429687145725876 0.00109423636205534 2.95140010557005e-05 0.000589738090909277 0.000711716546252842 0.00121078000285242 0.000440247337895077 9.92486003034501e-05 0.000260180125533667 0.000124092555155657 0.000190150873289005 3.4833349283104e-05 XM_585755.6 PARS2 PREDICTED: Bos taurus prolyl-tRNA synthetase 2, mitochondrial (putative) (PARS2), mRNA. 0.0 8803 100.00 0.968253968253968 NM_152268.3 PARS2 Homo sapiens prolyl-tRNA synthetase 2, mitochondrial (putative) (PARS2), mRNA. 0.0 2190 81.30 0.449007936507937 TCONS_00170656_5 sp|Q7L3T8|SYPM_HUMAN SYPM_HUMAN Probable proline--tRNA ligase, mitochondrial; 0.0 851 86.74 0.997894736842105 2 coding 0 0 0 0 -0.0597198402068246 0.575867916522427 0.0262066512867578 0.609259240042394 CCTTTCGCTGGAGTCTAGAGTGGGGTGGGACCAGGCCCCGAGAGCGCGGCTTTGTGATTGGTGGGAAGGGTAAGGGGCGGGCTTGTGCTGGCACGCCTCTGGCGCAGGCGCGGTGGTTTGTGTGGCGGTGTCTGCGTGGGCAACGTTCCATGGGACTACGGCACAAGTGCCTCCCTGTGCCAGGGTGTCATGGAAGGGCTGCTGACAAGATGCAGAGCACTGCCCGCCCTGGCCACCTGCAGCCATCAGCTCTCACAGTATGCTCCTCAGAGGTTTCACCACTGTGCCCCCGGGAGAGGGAAGCGCTTGATGCTGTCCCGCATGTTCCAGCCCCAGAAACTTCGGGAAGACCAGGTGCTCTCTCTCGAGGGCAGATCTGGCGACCTGACCTGTAAGAGCCAGCGGCTGATGCTGCAGATGGGCCTCATCCACCCGGCAAGCCCCGGATGTTACCACCTCCTGCCTTACACTGTCCGCGCCATGGAGAAGCTGGTGCGAGTGATAGATCAGGAGATGCAGACCATCGGGGGACAGAAGGTCAACATGCCCAGCCTCAGCCCAGCAGAGCTCTGGCGAGCCACCAAGCGGTGGGACTCAATGGGCAGGGAGCTGCTGAGACTTAGAGACAGACACGGCAAGGATTACTGCTTAGGACCAACCCATGAGGAAGCCATTACAGCCCTGGTCGCCTCCCAGAAGACACTGTCCTACAAGCAGCTCCCATTCCTGCTGTACCAGGTGACGAGGAAGTTTCGGGATGAGCCCAGACCCCGCTTTGGTCTTCTCCGTGGCCGAGAGTTTTACATGAAGGACATGTACACCTTCGACTCCTCCCCTGAGGCCGCCCAGCTGACCTACAGCCTGGTGTGTGATGCCTACAGCAGTCTGTTCAACAGGCTGGGGCTGCGATGCATCAAGGTCCAGGCCGACGTGGGGAGCATCGGGGGCATGGTGTCCCACGAGTTCCAGCTGCCGGTGGACGTCGGAGAGGACCGACTTGTAGTCTGTCCCAGCTGCCACTTCTCTGCCAACATGGAGACTCTGGACTCATCACGGACAAACTGCCCCGCTTGCCAGGGGCCACTGACCGAAACCAAAGGCATTGAGGTAGGGCACACGTTTTACCTGGGCACCAAGTACTCCTCTATTTTCAATGCGCAGTTCATCAATGTCCATGGCAAGCCGTCCCTGGCTGAAATGGGGTGTTATGGCTTGGGCGTGACGCGGATCTTGGCCGCTGCCATTGAAGTTCTCTCTACAGAAGACTGCGTCCGCTGGCCTGGCCTCCTGGCCCCTTACCAAGTCTGCCTCATCCCCCCCAAGAAGGGCAGTAAGGAGGAGGCGGCCGCAGAGCTCGCAGGGGATCTTTACAACCACATCACAGAGGCGGTGCCACAGCTCCAAGGGGAGGTGCTGCTGGATGACAGGACCCATCTGACCATTGGAAACAGACTGAAAGACGCCAACAAGTTGGGCTACCCCTTTGTGATCATCGCAGCCAAGAGGGCCCTGGACGACCCTGCACATTTTGAGGTTTGGTGCCAGAATACCGGAGAGGTGGTCTTCCTCACCAGAGAAGGAGTCCTGGAATTACTGAGCCAAGTGCAGGTTGTCTAACCACCCCCTGGACCCCTCCCACTGCATCTCACAGCCTTGGTGTTCACTGAAATGCTGCCTTTCCTATACTGCTCTCCGGAGCTGGTATCCCCAGAAACAGAGCAGCTTGTGGAAGGTGAGACCATGTTAGGAAACCGAGTTGTAGTCATTTGTTCGGACTACTGTATTTAAAGTTGTTACCTTGATCCCTTTGTCTGGGCTGGCCGTGCCGCCACATACCCTATCTTTCATATTCCACTGTGGAAGCTTCTGTTTGGAGGTAGTGGCTAGAAGGAGCCAAGTTGTCATCTTGGCCCTCAGGAGAGTCACTTCCCTTCTCTCAGCAGTTTCCTACACCACATGTAGGTTGGGGGGGCCTCCTGATGGCCGACGCCCTCCCAGCTGCAGCAGTCTGACCTTGGGCCTCTTGCTGCATTCAGTCCAGAGAGGCAGCCGGCCAGTCCTCCTTTGAGAAGTGGGCTGAGGGTCTGGGGACAAGAATCAGGACACCTGGCTGCCACTGAGTCACCAGTGACTTGGACATGACCCCTCCCCTGCTGGGGCCTTCAAGTTTCCCCATCTGTGACATGAGAAAATGGAACTAGATCTGTAAAGTCCTCACAGCTGACTGGCTGGTTCCTCAAGAGGTTTATGACAGGCAGATCTGGTTCCTCTCATCCTCCATCGTTTAACCTACCCAGAAAGTTAAAACAATTAGCTAATGGCCCCCAAACCATGTCCAGAGACGTGGCTCTCCCTCTTGAGTTGGTCTGGCACTGAGATCATGTTATATTGATTGAATAAAGTCAGACTGTTGGGGTGAGGTTTGCATGTTAATTGGAAACAGTGGTAACACCTGCCAAGTTAACAGTGCAGCAGCTTCTTGCCTGGAAACTCTCCTTTTTCTACTTCTCCACTGGAAAAAGAAAAAATTGGGTGACTGGAAAATGCGTGTTATACCATTTCTTCCGTCAAGTGTCTGCAGGCTTCCAGTGCTACAGTGACTTCGTCCTGGCTGCAGAGTTGGATCCTAGAGCCATGCATGATGGAGGTGAATTATTAGTAGAAGGTCACTGCCTGAGTGCTAGGGAGAACTGGCAGCAAGCTTGAGTTTTCATTGCTCCTTCCCCCAGGAGCAGGATCAGCTTCTCCATCCTCGGCCCCTGGTGTCACGGCTTGTCCATACCTAAGGAGAATCTTTCAGGGCTAAGCTCAAAGCCATCACCTCCTGAAACATGCTCGGCAGCTCCTGGCAATGGTTTCTGTCTTTGGCATCCCCTGTGCTCTCCTACTAGCACCGACACCCTTCTCACTGGGCGCACACAGCTCACTGTTTGGCTGCCAGCCTCTTGTCATTGACGGTCAGCTCCCTGAGGCTGGGGTCCTAGGCTGACTCCTAGTGCACTGAAGTGTTGTCTTGGCCTGTTGTTCTGCCTGCCAAACAGCTTCCCAGCAGCTTGTGACCGCTGATTCTGCCAGAGTAACCTCACCCTCAGCACACACCATCAGGGTTCCTAATGAATGTAGACGCCAGGCCCTAATGACTACCAGGCTACCGCTGGGCTCTGGGCCAGCATTCAGGCCAGGAGACGGGATTCAGAGAGCAAACCTAGAGAGGCTGGGTTGTAAGACAAGGATCTTACTCTTGGGTGCACAGTGGAATCCCCTGGGTCCCACCCCGAGGTTCTGTTCTGGGGTATGGCCTGGGCGTCAGCAGTTTTAAAATTCCCCAGATAATTCTAATTTGCCGACTTTGTGGAGTGTCCTCTGAGCCCACATTGCAGGGATGAACGTTTGAGTCATCTCAGTTGTGCATTATCAGGTTGACATGAGCTCTCTGCTTTCAGCACTTATATATACCATGTTCAGATCTTAAAACTGTGCAAGGTAAATGCTGTGAAATCCTCATTTTACAGATGAAACTGGAAGCTCCATTTAAGCAATTTAAGAATGCACAGCTATTATGTATCAGAGCTAGAATCTGGGTACTGACCAAAATCTGTGCCTGTCTCACTATATTGCGTGGCCTCTGCCTGGGCAAGATGATTCCAGTAAGTAAAATGGATTATGTATGTCTGATCAACTTAGCCTGAAGTAGAGAAATTAGAATTACGTACAAATGAGCACTTTAAATATTTTTTTAAATTTAAATTTGTGCTTCATAAGCATACTTTATGGAAGGCTAGCCTAATGTAAGAATAAGCACTTCTAAAAACCAGCTTCAGGGAATAGAGAACTAATTAATTTAAAACTGTCATAAATGTGTATGATATGGAATGATTTGAGGGTAAGGTAGAATCATGGAACTGTAGAACAGGAGAGCTTGCAGCCTGCTTGTCCAGCCCTCACTTCACAGATGGGAGACAAGCCTGCAGTGGGAATTAACCTGCTGCAACCCATCTGACTGGCAAAACTGCCTGATTGCAGACCAGGTGCCGCATCTCCTGAATTAGGCTACCTCAGGTCAATCTCGTTGCCAGGAGTGACGACTGGTTGAGTCAGCCTTTGAGCTACAGGAGCCTTTAGGTTTGAAAGAGATACCCATTGTCCAAGGAAGACACATACAAGGAGCACAGTGATTTGCTTAACATCCAGCTGAACTGAAACCCAGGTGTCTTGATGACTTAGTATTTCTTGCAGTAGCCAGGGGCAGTATAATTTGATGGAAAGATTAGGACCTTGAATAGAGAATCAGTTTTCCACTTAGCAGGTATATGATCATAGACAAACAACTTGTCTTTTGTGCATCTCAGTTTCTTCATCTGTGAAGTGCTTTCATAATGGCACCCACACCTTGGGTTGTCTGAGGGTTGGCTGAGCTGACTTATATGAAAAGCTTAACCCCTAGTGTGCTCTCTGGAACCACGATGCCTTGCATAGGATGACTTAGGAAATAATCCATTGGGAGCTCAGGTTCTGCTGTTCACACTGAGACCTGGGTTTTGTTTTTTTGTTACGTTGCTTCACAACTTTCCTGGGGAGTGGCACAAACAAGAATTAAGTAACATCTGCAGAATGGTTCCATCTCCCTAGAGGAAAGACAGAAATATTCAAACCGTGTACATTCCTCTATCCTTTCTGAACTTGCCAACATTACTTCTTGCCATAAATTGATGAAATGGGGTTACTGGCAAAATAACAGGTACAGGCTGTATTTTCATTGCTCATTCCTTGGGGAGATGGAGAAGCAACTGGCTGGGAAATACTTAACAGAATTAATACTTGGGGACAAAGGCTGGTGCATAACAAAACCATCATGTAAATCAAGCTTAGAATGTAAATCAAGGGCTCCATTAATATTCAGTGTTTTAATGGAAGAAACACCTGCTGGGCTATCAATAAAGGAGCTTTGTGGAAATCTTGAAATTGTCATTTCCTTAACTACTTGACCGCCAGGCCTCTTCACACCCCTGTCCATTTCTACGCCTAGGGGCCAGGATGCTT EMBV3_23420 TCTCACAGGGAAGCGAGCTGTGAAGAGTCTGGGATGGAAGAACATAGCGGTGTCATTGCA Gene GeneID:281056|CD247:NM_174012:5_cdna Constitutive 0 NULL GeneID:281056 3 GENE CD247 CD3Z MGC140430 CD247 molecule EMBV3_08802 GGGCCGCCCGGAGCCGGCAAGGGTACCCAGGTGAGTGATGAAATGGTCTTGGAGCTCATT Variant GeneID:280716|AK2:NM_173889:13_cdna 128^253 2 EMBV3_07159 GeneID:280716 2 GENE AK2 MGC137216 adenylate kinase 2 EMBV3_15084 GCCATATGCACAACACCAGCCCTTGTCAAATGACTTCCCATCTTAACCATGTGCAATTTG Gene GeneID:511639|RNF103:XM_002691359:201_cdna Constitutive 0 NULL GeneID:511639 11 GENE RNF103 NULL ring finger protein 103 EMBV3_08699 GCTGCTGCTTCATGGATTTCCAGAATTCTGAATATATTTTACGACACCCGGCCCAGCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17212 CTCTCTGCTCATCCGGAGAATCACAGGAAGATCACTGGGGAACCGTTGATCCGCCGATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32789 GTGTGCATGTGATCATATCTGAGGCTAAGCTGTGGGCTCACCAACAGACTGTAAGACACC Gene GeneID:510272|PRRC1:XM_002688975:1_cdna Constitutive 0 NULL GeneID:510272 7 GENE PRRC1 NULL proline-rich coiled-coil 1 EMBV3_04158 CTGCAGGCTGTACCCTAAATGCAGTTGATGGCCGATATTCATGGATTAACAGACTTGGCC Gene GeneID:616372|TMEM41B:NM_001099156:237_cdna UTR3_Alt 3 NULL GeneID:616372 15 GENE TMEM41B MGC143027 transmembrane protein 41B EMBV3_16006 TGGCATCAGGAAGGCTTCTGCCAGTTGTGAAATCAGCATTGCCTCGCTCCAGCTTTGTTT Gene GeneID:507359|IL6R:NM_001110785:111_cdna Constitutive 0 NULL GeneID:507359 3 GENE IL6R NULL interleukin 6 receptor EMBV3_32714 TGGGACCAGGGCTTCACGGGCCACAGGATGTTACAGTCAGAATCGAAATAGTGTTCTAAC Gene GeneID:532860|SLC19A2:XM_002694012:136_cdna Constitutive 0 NULL GeneID:532860 16 GENE SLC19A2 NULL solute carrier family 19 (thiamine transporter), member 2 EMBV3_29261 AGCCTCTGGATCCTGGAGCAAACCATTACACCAGTTCAACCTCAGCACCAAATCAGGTAC Gene GeneID:539787|THAP6:NM_001103290:98_cdna UTR3_Alt 1 NULL GeneID:539787 6 GENE THAP6 MGC160078 THAP domain containing 6 EMBV3_28625 CCAGGGAAGGGCTACTCAGGAACTAAAGAGCAAGTCTAAGGCCCATTTCCCCTCCTTTCA Gene BVT0101_011034 + 0 NULL GK000014.2:32870163-32883559 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053146 TCONS_00053147 1 XLOC_031664 Coding TCONS_00053147 XLOC_031664 Coding Coding VCPIP1 14:32880408-32908937 = TSS39276 8379 1 TCONS_00053147_10 1194 2 0.70635866517106 0.00136480988674552 0.00194904107675261 0.000395443963075744 0.000605281354839824 0.000659962123203307 0.000374145002876351 0.000839774237116494 0.000102627822824131 0.00200887534899734 0.000420102989813378 0.000361995117356866 0.000246229157159032 7.71490697769263e-05 0.000220015080599671 0.000396964086900226 0.000460092897712673 0.000949059849523149 0.00142987429014292 0.000731598156629153 0.00141213177848727 0.000669835568633598 0.000435337747699884 0.000476606029105547 0.000186607644825789 0.00117304877257554 0.000891600894463656 0.00101470264248363 0.00029694552113665 7.87509324182046e-05 0.000174424307081278 XM_588521.7 VCPIP1 PREDICTED: Bos taurus valosin containing protein (p97)/p47 complex interacting protein 1 (VCPIP1), transcript variant 1, mRNA. 0.0 8747 100.00 0.578708676453037 NM_025054.4 VCPIP1 Homo sapiens valosin containing protein (p97)/p47 complex interacting protein 1 (VCPIP1), mRNA. 0.0 4951 81.18 0.615825277479413 TCONS_00053147_10 sp|Q96JH7|VCIP1_HUMAN VCIP1_HUMAN Deubiquitinating protein VCIP135; 0.0 2305 93.20 0.984924623115578 0 coding 0 0 0 0 -1.12122360177622 0.00184562344380829 -0.00374920713126198 0.94138300620815 GCGCAGTCTCAGAGAGGGCGTGTATGTCTGTGTGTCTGAGGGAGAGAGAGCGAGAGTGAGTGAGTGTGAGTGCGGGGTAGGGTGGTGGCCGTTACGTTCGGGGCAACGGCTACGGCAGTGGAGAAGTAAGAAGAGAAACAACGTCCGGCGCTTCCGCCTTCGCTTAGGAGGAGGAGGAGCTGGTAGGGAAAGGAAAGTGATTCGCCTTGGGCCTGGACGAGACCGAGTCGGGCCGGCGGGGGTCTGGGCTATGAGCCTTTGAGGGTCGCTTGGGACGCGGAGCGAGACTCGAGAGCCGAGAGCTATGTCTCAGCCGCCGCCGCCGCCTCCGCTGCCGCCGCCGCCGCCTCCTCCAGAGGCTCCGCAGACTCCGCCGTCTCTGGCAGCGGCGGCGGCGGCGACTCCGGGGGGGCTTTCGAAGCGGAGAGACCGGAGAATCCTCTCTGGGAGCTGCCCGGATCCGAAGTGCCAGGCGCGTCTGTTCTTCCCGGCCTCCGGTTCCGTCAGCATCGAGTGTACCGAGTGCGGACAGCGGCACGAGCAGCAACAGCTGCTGGGGGTGGAGGAGGTGACCGACCCGGACGTAGTGCTTCACAACCTGCTGCGGAACGCGCTGCTCGGGGTGACGGGGGCACCCAAGAAGAACACAGAACTGGTAAAGGTGATGGGCCTTTCAAACTACCACTGCAAACTGCTGTCGCCCATATTAGCTCGCTACGGAATGGACAAACAGACCGGCCGGGCTAAGCTGCTCCGGGACATGAACCAGGGCGAGCTGTTCGATTGCGCTTTGCTGGGTGACCGCGCCTTCCTCATCGAACCGGAGCATGTCAACACGGTGGGCTATGGCAAGGACCGCTCCGGAAGCCTCCTGTATTTGCATGACACCCTCGAGGACATCAAGCGGGCCAATAAAAGTCAGGAATGCCTCATTCCCGTGCATGTGGACGGGGATGGGCACTGCCTGGTGCATGCTGTGTCCCGGGCCCTAGTGGGCCGAGAGCTCTTCTGGCATGCCTTGAGAGAGAATCTTAAACAGCACTTCCAGCAGCACCTGGCCCGGTATCAAGCGCTGTTCCATGACTTCATTGATGCTGCTGAGTGGGAGGACATTATCAACGAGTGTGACCCTCTGTTTGTACCGCCTGAGGGGGTTCCCTTGGGCCTGCGGAACATCCACATATTTGGCCTCGCCAATGTGCTTCATCGCCCTATTATTTTGTTAGATTCGCTCAGTGGCATGAGAAGCTCTGGTGATTATTCAGCCACCTTTCTGCCAGGGCTCATCCCTGCAGAGAAGTGCACCGGCAGAGATGGTCATTTGAACAAACCAATCTGTATCGCTTGGAGTAGCTCTGGTAGAAACCATTATATCCCCTTGGTAGGCATAAAAGGGGCTGCTTTGCCCAAACTGCCTATGAATTTGCTTCCTAAAGCATGGGGTGTGCCTCAGGACCTCATTAAGAAGTACATCAAACTTGAGGAGGATGGTGGTTGCGTTATTGGAGGAGACAGAAGTTTGCAGGATAAATACTTACTTCGGCTTGTTGCTGCTATGGAAGAAGTCTTTATGGACAAGCATGGTATCCATCCTAGTTTGGTGGCTGATGTCCATCAGTATTTCTACAGGAGGACCGGGGTGATAGGAGTTCAGCCTGAAGAAGTCACAGCAGCTGCTAAAAAAGCAGTAATGGATAATCGCCTTCACAAATGTTTGCTCTGTGGTGCCCTTTCTGAACTTCATGTTCCTCCAGAGTGGTTGGCTCCGGGAGGGAAACTGTATAACTTGGCAAAAAGTACTCATGGACAGCTGAGGCCTGACAAAAATTATAGCTTTCCCTTGAACAATTTGGTTTGCTCATATGATTCAGTGAGAGATGTCCTGGTACCAGACTACGGCTTGAGTAACCTGACAGCTTGTAATTGGTGCCATGGCACATCTGTGCGAAGAGTTAGAGGAGATGGATCTATTGTGTATTTGGATGGGGACAGAACTAATTCCAGGTCCACTGGTGGCAAATGTGGTTGTGGATTCAAACATTTTTGGGATGGGAAAGAGTATGACAATCTACCAGAAGCTTTTCCTATTACTTTGGAATGGGGTGGAAGAGTGGTCAGAGAAACAGTGTATTGGTTCCAGTATGAAAGCGATGCATCTTTGAATAGCAATGTGTATGATGTTGCGATGAAACTTGTTACCAAGCACTTTCCAGGTGAATTTGGGAGTGAAATCTTAGTTCAGAAAGTTGTCCACACTATATTGCATCAGACTGCCAAAAAGAATCCTGATGATTATACTCCTGTAAATATAGATGGTGCTCATGCCCAAAGATTTGGAGATGTACAAGGACAAGAGTCGGAGTCCCCGCTCCCAACTAAAATTATTCTTACTGGACAGAAAGCGAAAACTTTGCACAAGGAGGAGTTAAACATGAGTAAAACTGAAAGAACTATTCAACAGAATATTACGGAACAGGCTTCTGTAATGCAGAAACGGAAAACAGAGAAGTTAAAACAAGAACAGAAGGGGCAGCCCAGGACTGTTTCTCCCAGTACTGTTCGTGATGGCCCATCCTCTGCACCTGCCACCCCTACCAAGGCTCCCTATTCGCCAACCACTTCTAAGGAGAAAAAGATCCGAATCACAACTAATGATGGACGGCAGTCCATGGTTACACTTAAGCCTTCAACAACCTTTTTTGAACTTCAGGAAAGCATAGCCAGAGAATTCAACATTCCGCCATATTTACAGTGTATTCGATATGGCTTTCCTCCTAAAGAGTTAATGCCACCCCAGGCAGGAATGGAAAAGGAGCCAGTTCCTTTACAGCATGGTGACAGAATCACAATCGAGATTCTGAAAAGTAAAGCCGAAGGGGGTCAGTCTGCTGCTGCCCACTCGGCCCACACTATGAAACCAGAAGACAGTGCTGTCACCGGCAGACTGTCATCTAAGGAGCTTCAGGAGCAAGCTGACAAAGAAATGTACTCCTTGTGTCTTTTAGCAACGTTAATGGGTATGGCTGATGGCAAGCATTGTACTTTCCCACATCTGCCTGGCAAAACCTTTGTCTATAATGCTTCTGAAGATAGACTGGAGTTGTGTGTGGACGCTGCAGGACATTTTCCCATCGGTCCTGATGTTGAAGATTTAGTTAAAGAGGCTGTAAGTCAGGTTCGAGCAGAGGCTACTACAAGAAGTAGGGAATCAAGCCCCTCACATGGGTTATTAAAACTAGGTAGTGGTGGAGTAGTGAAAAAGAAATCTGAGCAACTTCACAATGTAACGGCCTTTCAGGGGAAAGGGCATTCTCTAGGAACTGCATCCAGTACCCCACATCTTGACCCAAGAGCCAGGGAGACTCCAGTTGTAAGGAAGCATACGACAGGGACAGACTTTAGTAGTAGTTCCATTAAAACAGAGCCTTCTGTATTCACTGCTGCTCCTAGTAACAGTGAGCTTATTCGAATAGCTCCTGGAGTAGTTACAACGAGAGACAGCAGGCAGCTTGATCCTGATATGGTTGAGGCCCAGCGGAAAAAATTGCAGGAAATGGTGTCTTCTATTCAGGCGTCGATGGACAAGCACTTGCGGGATCAAAGTACAGAGCAGTCACCATCTGATCCTCCTCAAAGGAAAGTGGAAGCTGTGAGTTCTTCTGTGAAGTCTGGGAGTCTTCAGACTGGCTCACCTGAATCTTTTTCTCCAACTGGTGACACTGAAAATCTGAATATAGAAACAGCCGATGGCTGTGTGGCAGAGGCACTGGAAGCAGCATTTGCTGAAAGGTCAGAAGCACAAAAGGGAAGTTCTGTGGAGGAGCCCGAAGAGATGGATAGTCAAGATGCTGAGATGACAAACACAACTGAGCCAATGGATCACTCTTGATTTAATTAGAGGCTAATAAAGGCAGAATGTTTATTGTGAATATGTAATATTTGTTGGCTGGGCCACATAACTTGATTAGTCATTACAAAATCTTGTACGTATATAATTCAAAGATTATATCTAGTTATTCAGTGCATGATAGCAAGTGTGTGATTGGCAATAGCTTTTAATATACTGCTGCCCAGGCTGGCTCTGAATTCCTGTAAAATAGTTATTAGATCTGCTAAAATGAGTTACTTCCATATATGTGGTTCATTGGAAGTTCTTTGTAATTTTAATTCCATGAAAGTCTTAATGTTGCAAACATGAAGATTCTCTTGCTATATCTGTTTGATTTCTCAAAAGGCTAGAACTGGGGGAAGATAAGATTTTGCTAATGTTGATGTCATCAGGATAACCATTCCACATACTTACTAGCGTGTCAAAGGATTTATGTAAATTTGAAGGTTATCTGAACTAAATTGTATCTTGAAATTCATAAAGGATATGTTAGACACTGGGATCCTGACATTTCTGTGAACGTAAACACATTCATAGAGATATGTATTCTTCGTGAAAATATCTTGAGAATATAGTGTAATGATATATAACATTTTGCTGATTTGAGCAAGCTTGGGGTAAAGTATCTATTCTAGAATGATAAAGTCAATGTGATTCAGTAATGTTGCTGTCTGAGCCAACACAGCCAATTGTGTGCTCTGGTGTTGATAATATGTTACCATTATTTTGAATCCTGGCCTGGTCAAGTACCACCAAATTTTTGTTCTTTAATCTTGCAGAAAAGTTGATCGCAAAGTGTGGTAGAAAAATAATTAAAAAAATAATGGTAGCAGTAGTTAATCTCTAATTTTCAGAGTTTGTCAGATTCACAGAGAATTTATAAATAAGAATTTATCTTTATGAATGGGTTACATTGTTCTACAATTTTGATCAATGGTATTTAAGTTGTATATGCTAAATGTCTTTGAGCCCCTCTGAACCAAAAATGTTTCCTTTTTTTTTTCTTAGAATCCATTATATTTTCTTCATTTGTTAGCTTCACTTGGATTTGGATGCAAACTTGACTGCATCATACCCTGATCAACTGGGCATTTGCTTAAATAGTGTATTCATCAAACCTTTAGTGCCTGTTTCCTCAAGAAGCAGCTTTCATGTTTACTCCTTAAAGAATGTTTATCCTGAGATTGGCATCACACTATTTTAACCTATTCTGCAAATCTGTATTCTGAAATGTACACGTTAATCCATCTTTTTCCTCTGTTCACTGAAATTAAGTTGAATTTGAATGGATGAAAGACAAAATGTATGTTAATACAATCTCTTATCTAGAGCATTCAAAGCCTGGCTGTCTCTGTTTGCTCGTGTGATAGATGCAGGACCGTTTGCATTTTAAGAAAATGTACATCAGAAAGTATGTTATCGGGTGTTTAAAAATCTCAGCAAATTGACTCATAAGGAATATAGACAGTACTTGTGTTTCCAAATAAGGGAGGTTTTGGTTTCTTTCTATGAAAGTGTCTCTGCCTGAATCACTTATTAAACAAACTACTCCGTTTTGAATAGGGAAAGAATGGAAACCTTAGACATTTTGCAGGTGATATCTGAGCAAGATACACATTTGGGTTTTATCACATTATCACCTGTTTAAAATCACATTTTATCTCCATTCTTCTAAATTTACTTTCAAATACCTTTCTCTATGTCTATAAATAGAAGGAAATTTTAGAACTTTTATATTGTGTATTAGTTTTACATTAAGAACTGTGGCTCCCAAATAGTATTTCCCATTTAGTTAATTCAGGTGACTTCTCTGTATTAAATTTAAAAATTACAGATATCACTAACCACTATAATTATTTTTGGCTTTTTCAGCCACTGAACCCCCCCCCCCTTTTTTTTTAGTTTAAATACAGGAAAACTTTCACAAACAAATGCATTGCTTCCAGGTAAACGATATAATCACCTTTTCTTTAACAAATATTTTCTTCACCTGTGGCTCAGTATGTTTGATAACTGACAAATACATTTCATAGCTTAAAGTAAAAACATCAGCTACACATTTTATCTCCCTATTAAGTCTCCCTTTAGTCAAGTTAGAATGTACCTGTGGATAGTAGAAGGCAGGCTCAATCTCTGACAACAGTATTAATTTCTCTTGCTACGGCAGTGCTGTTTAGAAGCTGGTTTAGGTGTGAATATTTTAATAATAGTTTGGGTTCTCCCTTGATAAAGAATAAAAGGCTTGATGCTGAGAATGGTCAGGTTTCTTGACATTATTTTAAATCAACTGAAATACAGTTGCAGGAATTAATGGATTTGAGAAGTGGGCCAGGAATCTTCACAAAAAAGTCTTAGAATTTCTTTAAGTTCTAGACTATCATTATTTGTCCTTCCATATGGTTACCATCATCAAATACATAAATTACAGGAATGATTTTTAGAACTACCTTTTGTGATTGCCACAACTTTGAGTCTAAACTGGGGATCATAAATTAGTTAAAATATTTTCTTAGCTCTCCATTAAACATAACTCTAATTCAGTCCTATAGTTAAAATTACATTTGCAGTGTTTAACTGAAAGTTGAAGCGTAGTTAGTCATACCAAGATTGCATTGATGACCCGCGGTCCAGGTAGAGTTGAAGATGATGTGTCTCTAGAATACTGGCGTTAGAAACTGGTTGAAATCGAAGAAAACAAGATACTGTCAAATATTATGAGCTAGAATATAATGAACACCCAGGGAAGGGCTACTCAGGAACTAAAGAGCAAGTCTAAGGCCCATTTCCCCTCCTTTCACTGTATTTCAGGTATTTTATTGGAAAAGTTAAGCTAAAGATCTGAGACATTTAGCAAGTGCTATTGACTGTGAAATTTGCTTTAAATCTTCTGATGAGTTTTAGTTTGGTTTTTTGCAATCAAGTCTACTGCTTGCAATTAAGATGTCAATCTGAAATGCATCTATGGTTCCTAGCCACACAGGTCCTTGTTGCCATTATTTTTAAGAATCTAACTTTATTGGAAATTAGCAAACTTTTGCATATGATCTATTACCTCAGGGAAGATCACTTGCTAGCAACTCACTACTAATGACAGGTTTTTGAGAATTGTACTGACATCACTTGTTAGCTACTAAATGCAGAATTTATAACAGTATTATTTTATGTAGTTAACTACTAACTGGCTGCTAGTGAACATTTCTCTAAAAAATTTAGACCTCACTAATAACTAACCTTTAGGTATGAAATAAACTTGTAATTTCTGTCTTTAAGCTTTGGTCAATACAGTGACAATATAAAATGTTTATTTCAGAATATCAGTACCATTTTATTTTTCAACAAGAATTTTAATTGGGTCCATACATAAAATACCACAGAGCAGACTTTTAAGATTCATGGTTCTCAGAACAAAGTTTCCATATTAAGATTTTCATAAAAGCTTTTGCAGAACTGAATTAAACTCCATTCATCATTTAATATGACTTTAAAATCACCTTTTATAAGAGTAACAGATACATACTCTAAGCTGGGGTATAGATATATCCTACATGTCAAGGTTATCATGTAATTTAACAAAATTGCACAACCTCAGGCTCTTCACAATATAATTTTTCAAACCAGAAGTATTCACTTGAAAACACCACAGTAGAATGTTTACTTAACAAAAGGGGAGCTATATTACCAATGTAAGATTTATAGTTAATTGTAAGTTCTGCCATTCTTAATAATTCTTTGAGATGCTAAGTGTTTCAATTCATATTTAATGATACTTAAATCGTGGGAATTTTAACATTTGTTCCAAAATAGCAGAAATTGTAAAAATTGTGAATTATTGGAGAAAATGCCATTACTTGTATATCTGACATTTAATTTTTTTAAATTATGGAATCTACATGCTTTTGTAGTATAATATTAATACGATGATTATTCTCTTGTAAAAGAAAAGGAAAACTAGTAAAAAGTTTTAGTTGATGTTATGTGCTTGTGAGTATCAATTACTTAGTATTTGAAATTTTAAGGTCTTGCATCCTTTTCTTTAGAATGCACAAGTCCCTTCCTGAGCTTTTATGCCTGTGGTAGAGCAGTAAAAGCCTGAAAAGGTTGTCAGTATTTTTAGGTTCATTTGACTTTGAGAATTAGTGCCAAGAGCTGGAGGATCTGCTTTTTGGAGGGAAATGTTATTTAGAATATGTAAAAATAAGTGTAATAGTGTAAATATTTAGAAAAAATTAAGTAGCAAGTGCTTTAACTGCTGAATAAAATAGTATAGATGTTCTACCATCCCTAAGGCACTGGCTGTTATCCATTATTTTCTGATTTTGTGATTGCTGTATATATTACACTTGAGTAATAATTGGTGATAGTGTATCATATCTATATAGAGTTCTACAACACACCTCACTGTACAGTATTTGAAAATTTTATATCAGTAATAAAACTGTAAGTTAATACATACTGATTTCCCCCTCAACTTCTCCATATTAACCTTTTAT EMBV3_32149 ATAAAGACATGTAGCAATAATGGGGCGAGGGTGATCTCACAGTGCCTTTGGAAGGGCCAG Gene GeneID:767898|ZFP36L2:XM_002691296:397_cdna Constitutive 0 NULL GeneID:767898 11 GENE ZFP36L2 NULL zinc finger protein 36, C3H type-like 2 EMBV3_11820 CTTAGCCACCACCTGTTGTTAAGGCTCTTGCCACAAGGGAAGGCGAGGGTAGAAGACAAA Gene GeneID:514326|TLE3:XM_002690487:429_cdna UTR3_Alt 3 NULL GeneID:514326 10 GENE TLE3 NULL transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) EMBV3_08607 GTGCATGAACATTTCCCAGATTTCCATGATGCTGTTGAGGTCCTAAGCAATTGACACAGC Gene GeneID:493638|PTGES3:NM_001007806:932_cdna Constitutive 3 NULL GeneID:493638 5 GENE PTGES3 CPGES MGC127581 prostaglandin E synthase 3 (cytosolic) EMBV3_03970 TGGATCGAGACGACCAGACAGAACTACTCTCCCCGTCCCATCACTATAGGATTCTGAACT Gene GeneID:537640|HUNK:XM_002684590:117_cdna Constitutive 0 NULL GeneID:537640 1 GENE HUNK NULL hormonally up-regulated Neu-associated kinase EMBV3_32274 GATACCCCATCAAGGCACCCAAGCTGCCAGGCTTTGGGCCTGGAGGAGTGGCTGGTGCCG Variant GeneID:280781|ELN:NM_175772:20_cdna 678^719 3 EMBV3_15963 GeneID:280781 25 GENE ELN MGC148808 elastin EMBV3_24462 TCTCAAGGGCAATCCCAGTCCTCCTGCTTCCCCTTCTGTGCCCTGGTTTAGGTAGTTATT Gene GeneID:531981|KRT73:NM_001111104:36_cdna Constitutive 0 NULL GeneID:531981 5 GENE KRT73 NULL keratin 73 EMBV3_33357 TCCACACTAGTGCATGTATAAAATGGCAGAATGGGGCTAATATGTAGATGATAAACTGAC Gene GeneID:514447|CLSTN1:XM_002694061:173_cdna Constitutive 3 NULL GeneID:514447 16 GENE CLSTN1 NULL calsyntenin 1 EMBV3_38988 CAGAAAGCATGTCTCTGGGGATGGAAGTTCTAGGATGTATCCAGGAAGTACAGACTGGGA Gene BVV0102_155804 + 0 NULL GK000028.2:28544371-28562361 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162148 1 XLOC_099030 NonCoding TCONS_00162148 XLOC_099030 NonCoding NonCoding - 28:28555750-28556699 - TSS121480 949 1 TCONS_00162148_3 111 0.713382507903056 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000125671836216487 0 0 0 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 8e-116 421 85.22 0.394099051633298 0 noncoding 0 0 0 0 -0.0337834725923381 0.741556669693443 0.0379235317554032 0.619392237731306 ATTGGCATAAGTTGTCTATAGTATTATTTTTTAAACTGTGATAGTATCTAGTTATATACATTTGAAAATTCTTAAAATTTATTTTTTCTGTTATTTTTTTGTCTGGGTTTTAATCTGTTGTTCTTCTCCCAACTTTTTGAGGCAGATGCCTAGCTTCTTAATTGTCAGCCCATCTTCTGTAAATAAGTATGGAAGTTGTTAAGATGTTTCTAACTTTCCCTTTAACTGTGTCTGACAAATTTTCATATCTAGTATTTTCATTATCATATTCCATTCTAACTTTTTAAAAATTTCAATCATGATGTGTTAGTTATCTATAACTAATAGGTTTCAATAGTTATCTATAACTAATAGTGTTTCAAAATGCCCAACTGTATTTTTTATCTTTTTTGTGAATGACCACCAATCTTAATTAATCCTTGGGTCACAAAATCACTCCCAGTCTGTACTTCCTGGATACATCCTAGAACTTCCATCCCCAGAGACATGCTTTCTGGCCTTTGGACTCTTGCATACTTTGTTCCCTCTGCCCAGACACTCCTCCTCCCTGCTTTATTAACTCCTACTCAATGGTCCCAAAGAAGGGCAATGCCAAAGAATATTCAAATTACTACACAATTGCACTCATTTCACATGCTGGTAAGGTCATGCTCAAAATCCTCCAAGCTAGGCTTCAAAAGAACATGAACCAAGAACTTCCAGATGTACAAACTGGATTTAGAAAGGCAGAGGAACCAGAGTTCAAATTGCCAACATCTGTTGGATCACATAAAAAGCAAGAGAATTCCAGAAAAATATCTATTTCTGCTTCATTGACTATGCTAAAGCCTTTGACTGTGTGGATCACAACAAACTGTGGAAAATTCTTAAAGACATGGGATACCAGATCATTACCTGCCTCCTGAGAAACCTGTATGCAGGTCATGAAGCAATAGTTAGAACCAGACAC TCONS_00160490 TCONS_00160491 . 3' 5663 TCONS_00160490 TCONS_00160491 . 3' 6611 EMBV3_28235 CATTTGATTTAATAAGACTCTGGGGCCTGTACGAGGAACCATCTTGGACTTTTGCAGAAG Gene GeneID:530205|LOC530205:NM_001083456:159_cdna Constitutive 2 NULL GeneID:530205 3 GENE LOC530205 MGC137767 hypothetical protein LOC530205 EMBV3_12382 CTGTTGGCATGTAGATGATATGTGTAAGGAAGCTTTGGCTTATGTGAAGAGGGACCTTGG Gene GeneID:514599|GRPEL2:NM_001075674:58_cdna UTR3_Alt 1 NULL GeneID:514599 7 GENE GRPEL2 MGC137946 GrpE-like 2, mitochondrial (E. coli) EMBV3_15878 CTTTGTCTGGGTTGGTAAGGATTCTCAAGAAGAGGAGAAGACAGAAGCCCTGACCTCTGC Gene GeneID:535077|GSN:NM_001034627:13_cdna Constitutive 0 NULL GeneID:535077 8 GENE GSN MGC127421 gelsolin (amyloidosis, Finnish type) EMBV3_34198 CACTGCTGTAGACAAGGAAAATAGTGATATGGAGCTGACTGTCTTGTGGGCCGTGAGAAG Gene GeneID:506032|LOC506032:XR_084620:50_cdna Constitutive 0 NULL GeneID:506032 19 PSEUDO LOC506032 NULL similar to Protein Njmu-R1 EMBV3_27359 GGTCTAGGTGCTGAGAGACATAGGAAAAGAGGCAAGAAACAGGTGACAGGTCTTATATGT Gene BVV0102_414814 + 0 NULL GK000004.2:14452244-14872336 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186090 1 XLOC_112143 Coding TCONS_00186090 XLOC_112143 Coding Coding - 4:14845037-14845428 - TSS138458 391 1 TCONS_00186090_1 38 0.416879795396419 1 0 0.000173985781225485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.83924054732452e-05 0 0 0 0 0.00037211692377908 0 0 0 0 0 XM_002701174.3 LOC100335269 PREDICTED: Bos taurus putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase-like (LOC100335269), mRNA. 1e-25 120 79.86 0.345268542199488 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 7e-23 111 77.78 0.358056265984655 TCONS_00186090_1 sp|Q8CEL2|CT026_MOUSE CT026_MOUSE Uncharacterized protein C20orf26 homolog; 5e-06 43.1 65.79 0.921052631578947 0 noncoding AAGGAACTCTGCCGCATTTAATTTTCCGTTAACATGGTCTAGGTGTTGAGAGACATAGGAAAAGAGGCAAGAAACAGGTGACAGGTCTTATATGTTATGCTAAGTAATTTAAATTTTATTTAAAGCCATTATTTCTTTTATTGCAAGAGAGCAAAATGATGAGATGCTTATTTAGAAAAATCATTCTCATAGCAGTATGGAAGATTTTCACTTAAAAGGCAAATGATGTGACTAGACATTTTCCCAAAGAACACATTCAGATGGCCAAAACAGGCACATGAAAAGATACTCTACATCACTAACCAGAGAAATGCAAATTAAAACCTCAATGAGACATCACCTTACACCTGTCAGAATGGCTATTATAAACACACACACACACACACACACA TCONS_00180888 . 5' 75398 TCONS_00180888 . 5' 75398 EMBV3_27747 TGTCATCGTGGCCTCCGTCCTGGTCTTCATCTTCGTGCTGCTCATGCGCTACAAGGTGCA Gene GeneID:767839|LRFN3:NM_001076959:778_cdna Constitutive 0 NULL GeneID:767839 18 GENE LRFN3 MGC137807 leucine rich repeat and fibronectin type III domain containing 3 EMBV3_14282 TCCAGCTCCTCCAGCTCCTTCTGAGAATGAACCTGTCTAACCCCCAGACTTTACCCGTGA Gene GeneID:787487|VWCE:XM_002699280:201_cdna Constitutive 0 NULL GeneID:787487 29 GENE VWCE NULL von Willebrand factor C and EGF domains EMBV3_40014 CCAAACTCATTCTATGAGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACA Gene BVT0102_102081 - 1 EMBV3_38055 GK000028.2:44776992-44819688 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00199716 TCONS_00007479 TCONS_00240570 TCONS_00152751 TCONS_00060450 TCONS_00124122 TCONS_00238892 TCONS_00233446 TCONS_00250635 TCONS_00064860 TCONS_00071338 TCONS_00152649 TCONS_00224115 TCONS_00031916 TCONS_00189101 TCONS_00048823 TCONS_00063101 TCONS_00162600 TCONS_00197530 TCONS_00251536 TCONS_00115689 TCONS_00249014 TCONS_00207066 TCONS_00254141 TCONS_00060447 TCONS_00006941 TCONS_00110347 TCONS_00156993 TCONS_00250238 TCONS_00040856 TCONS_00060451 TCONS_00240558 TCONS_00206538 TCONS_00020842 TCONS_00223458 TCONS_00175068 TCONS_00250554 TCONS_00139971 TCONS_00254568 TCONS_00131040 TCONS_00007449 TCONS_00007556 TCONS_00162777 TCONS_00152746 TCONS_00199737 TCONS_00251955 TCONS_00055445 TCONS_00060449 TCONS_00218764 TCONS_00252078 TCONS_00252355 TCONS_00136862 TCONS_00063064 TCONS_00088085 TCONS_00023027 TCONS_00031937 TCONS_00250538 TCONS_00253241 TCONS_00186815 TCONS_00197506 TCONS_00222771 TCONS_00251853 TCONS_00124128 TCONS_00022022 TCONS_00185929 TCONS_00135700 TCONS_00098584 TCONS_00060448 TCONS_00078858 TCONS_00109860 TCONS_00073275 TCONS_00063165 TCONS_00218860 TCONS_00251931 TCONS_00162513 TCONS_00039852 TCONS_00022063 TCONS_00233371 TCONS_00056147 TCONS_00233374 TCONS_00166316 TCONS_00060446 TCONS_00206627 TCONS_00130237 TCONS_00206425 TCONS_00080323 TCONS_00040696 TCONS_00252935 TCONS_00207276 TCONS_00250666 TCONS_00206407 TCONS_00037883 87 XLOC_121368 XLOC_003040 XLOC_147234 XLOC_092516 XLOC_036736 XLOC_075674 XLOC_145558 XLOC_142928 XLOC_153578 XLOC_039584 XLOC_043109 XLOC_092414 XLOC_137411 XLOC_018161 XLOC_115140 XLOC_028954 XLOC_037828 XLOC_099481 XLOC_119191 XLOC_154477 XLOC_069858 XLOC_151957 XLOC_125585 XLOC_157079 XLOC_002503 XLOC_066251 XLOC_095453 XLOC_153181 XLOC_024670 XLOC_147222 XLOC_125060 XLOC_011517 XLOC_136758 XLOC_104851 XLOC_153497 XLOC_085033 XLOC_157500 XLOC_079745 XLOC_003010 XLOC_003117 XLOC_099658 XLOC_092511 XLOC_121389 XLOC_154896 XLOC_033253 XLOC_132083 XLOC_155019 XLOC_155296 XLOC_083073 XLOC_037791 XLOC_052872 XLOC_013697 XLOC_018182 XLOC_153481 XLOC_156182 XLOC_112866 XLOC_119167 XLOC_136078 XLOC_154794 XLOC_075680 XLOC_012693 XLOC_111982 XLOC_081923 XLOC_058829 XLOC_047743 XLOC_065764 XLOC_045040 XLOC_037892 XLOC_132179 XLOC_154872 XLOC_099394 XLOC_023669 XLOC_012734 XLOC_142853 XLOC_033950 XLOC_142856 XLOC_101154 XLOC_125149 XLOC_078948 XLOC_124947 XLOC_049207 XLOC_024512 XLOC_155876 XLOC_125794 XLOC_153609 XLOC_124929 XLOC_021712 Coding TCONS_00056147 XLOC_033950 Coding Coding - 14:39818282-39822453 - TSS41824 4171 2 TCONS_00056147_4 321 0.998081994725486 1 0 5.67102486131979e-06 8.57739780911791e-06 3.76819355868514e-06 7.41619843779785e-06 7.60800917290799e-06 5.37025673234107e-06 7.7880314732369e-06 5.47518503455015e-06 2.18279336556382e-05 0.00016138735618779 0.000105503753352536 0.000219177586349476 3.53734783598974e-05 1.50232430374502e-05 5.47833093407976e-05 0.00100268766070272 0.000640235972245086 0.00106511131686773 6.63630473340749e-06 4.11026532244835e-05 3.55741298916931e-06 0.000477877598581457 0.00092991897252167 0.000656911083338766 1.05909269388318e-05 5.57109659428705e-06 7.23110263266897e-06 0.000330464355125125 0.000249855201599347 0.000535703890232655 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-132 479 97.86 0.0668904339486934 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 2e-176 625 69.50 0.374490529848957 TCONS_00056147_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-123 388 58.75 0.993769470404984 1 coding 1 1 1 1 0.0767504037402417 0.610784440884236 -0.00268007721044233 0.973915093372576 CTTCGTCTCTGTTTCTTTCTCTTCTTCTTTTATATAAAATTGTATATCTGAAATTCCAAACTCTACTCTAGATTTTTAATTTATGCTTTTTGGTATTTGATATCAATTTTGTACCTGTATTTTCTTTATAATTTTTGTGACATTGTTTGTATTGGTTTGTTTGTTTTCTCTCTTTATTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTAACATTGTATTTTTGAAATTCCAAACTCTACTCTAGATTCTTAATTTTTGCTTTCTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTTGCGACCTTGTTTGTTTTTGTTTGTTCTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTCCTTCTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTGCTTTTTGGTATTAGTTATCAATTTTGTACCTGTACTTTCTTTATAATTTTCGTGACCTTGTTTGTTTTTGTTTGTTCGTTTTTTCTCTCTTTCTTTTTCTTCTTTTTTTCTTTAACATCGTATTTTTGAAATTCCAAACTCTACTCTAGATTTTTAATTTTTCCTTTTATGTATTTGTTACCAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGCGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACTCTCCTTTTTCTCCACCAGGTCGCCTATGTCTCCTCCCTAACCCCTCTCTACTCTACCTAACTCTGTGAATTTCTGTGTGTTCCAGACGGTGGAGAACACTTAGGGAACGGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTCACCTTCCTCCTTCTTCTCTTCTCTGTATAACTCCGTGAACATCTCTGAGTGGTCCAGTTTTGGAGTGCACATAAAGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACCATAGAGAAACTTTTCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAACCGGAAGCTGGATACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATTGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAGGCTGCCCAAAGTCACCCCAAAACTATAGACATCTCATAACTCATTACTGGACATTTCATTGCACTCCAGAGAGAAGAAATACAGCTCCACCCACCAGAACACCAACACAAACTTCCCTAACCAGGAAACCTTGACAAGCCACCTGTACAAACCCACACACAGTGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACACCCCAAACTCAGCAATTTAAACAAGATGAAGAGATAGAGGAATACTCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACCAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCGAATAATGATAGTGAAATTGATCCAAAATCTTGAAACTAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAATAATGCAATAAATGAAATTAAAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGATAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCCAGGACAATATTAAAGGCTACAACATGCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTGGAAAACTTCCCTAAACTGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATATTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAATGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACCAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAACGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAATGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATACGTTGTCTACAAGTGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATAGGGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACACGGGAGCACCACAGTACGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTTACACCTATGGATAGATCAACTAAATAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATACGACATTTCATTCCAAAACAATGAATTTCACCTTTTTCTCAAGTGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAAGCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATTTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAGCAACCCAAAACCTGTGGGACACGATAAAAGCAGTCCTAAGGGGAAAGTTCATAGCAATACAGGCACACCTCAAGAAACAAGAAAAAAGTCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATATTAAAAATTAGAGCAGAAATAAATGCAAAAGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTATATGCCAATAAAATGGACAACGTGGAAGAAATGGACAAATTCTTAGAAAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACGGAAATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAAGCCCCGGTCCAGACGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCGGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTAAGGGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAA TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 42256 TCONS_00051793 TCONS_00051794 TCONS_00051796 TCONS_00051797 TCONS_00051798 TCONS_00051799 TCONS_00051800 TCONS_00051792 . 3' 46426 EMBV3_22206 ACTCTAGTTGAGTATGAAACATACAAGGAGGCCCAGGCTGCTATGGAGGGACTCAATGGC Gene GeneID:518045|RBM8A:NM_001035324:71_cdna Constitutive 1 NULL GeneID:518045 3 GENE RBM8A MGC127566 RNA binding motif protein 8A EMBV3_37464 CTCCGGTGAAAAAGAAACCGAATATTTCAGCTAAATTCTGTCCAGCAGTTGATAAATCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20625 CACCGCCACTGTTTCCTGTCAACAAGGCAGGGTCAGAAATATAGCACCCCAGTGGAAACT Gene BVT0102_446269 + 0 NULL GK000003.2:23211693-23312663 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176188 1 XLOC_105967 NonCoding TCONS_00176188 XLOC_105967 NonCoding NonCoding - 3:23261380-23262231 - TSS130947 851 1 TCONS_00176188_1 109 1 0 0 0 0.000282730495773837 0 0 0 2.74110476725318e-05 0 5.56296606006033e-05 0 0 0 0 0 0 0 0 0 0 0.00018591257888143 0 0 0 0 2.44248094682066e-05 2.4837220829778e-05 0.000220320018384925 0 0 0 0 noncoding GCGACCCGGACAGATGAGGTGTCCGTGGCGACCTTCCTGCCTCAGTGAGTGTGGGAACTCGGGGCTTCCCAGGGCCCAGGGGTGGGAATGTAAACGAAATGGCCCCTGCTGGAGACCAGGCTCGTGTCCTCCCTCCGCTGCCCTAACCCAGGAGGAGGCAGGAGAGCTTGTGGAGTCTCCTCCACGAGGGTGCAGAGGGAAGAAGCTGGGGCTCTGGGGTGCCAGGCTTGCTCTACCTCTTGGCACCATCCTGACACCCCCAGACCCCAGAGGGGAACGCTTCCTGCCAAAAGTCCCACCACCGCCACTGTTTGCTGTCAACAAGGCAGGGTCAGAAATATAGCACCCCAGTGGAAACTCCTTCCCTCCCTCTTCCCCTCTGTGTTCTGTGGTCAGTCATCTGTGGAGAGCAGGCATCCTGATTCTTTCTAGCAAAAGACAACCAACAAGAGGCTGAGAAATGGTTCCTTCTCAGCCCCCTTTCAACTGTCTGTAGAAGCTGTGGCCTAAGATGGGCCGTTCCCTGTGTGTGTTACTCTTGACTTTGCTTCACTTCTCCATGCCTTTCCTGTGTGTTGGAGTCTTCCTTCAATTCCTTCTAGTTGCCTGCTCAACATTTCCTCACGCCTCCAGTAGCACTACCCAGAGCAGATCTGTGGCAAAATGGTAAAACATTTTAAGTTCGTGCTGGCATCTTCTCACTTCTTTCTTAATCTTCTTCCTCACCATCTTTCTATTGGCCAGCAGCTAGTCTGCATTTAACAAATGTGCCAGACACCATAAGGGTGCTGGGGATACGCCAGCCAGAAAGTGGGATAAAGTTGATAATTTCTCATTGCTTCCATTCCAGC TCONS_00169151 . 5' 44636 TCONS_00169151 . 5' 44636 EMBV3_43338 GGAACACTTGCTGTGAGTCCAGCTGCTGCAAGCCCTGCTGCCCCCCAACTTGCTGTCAAA Gene GeneID:788186|LOC788186:XM_002707763:349_cdna Constitutive 0 NULL GeneID:788186 19 GENE LOC788186 NULL similar to keratin associated protein 9.2 EMBV3_13250 ATGGTGCCAACCAAAAACTTCGTGACGGGGTGGCACGCCAACTCTGGGCTGTCAGGTTTT Gene GeneID:767820|SGSM3:NM_001076545:222_cdna Constitutive 0 NULL GeneID:767820 5 GENE SGSM3 MGC137553 RUTBC3 small G protein signaling modulator 3 EMBV3_16561 GGTGGGGCTGTGATGTATGGAGCTACAGCAGCCATCTTGCAACCAGCAGTCCAACTTTAT Gene GeneID:618386|TCF25:NM_001099177:456_cdna Constitutive 0 NULL GeneID:618386 18 GENE TCF25 MGC148804 transcription factor 25 (basic helix-loop-helix) EMBV3_36102 GTGGGCGAAGACTTCCGGTGGTACTTGAAGAGATTTTGAGCAGCACCATCAAATCTTACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06202 CGGGCCGGAAGGAGCCCCTCGTCGTAGCGGGAATGGGCTGTTTCTGGGGAGCTGAAAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33841 TTCCAGAATCTTCAGCTAGGGGGTGGGATTCACATGGGGAGTGGTGGCCCAGAAGATGTA Gene GeneID:504499|NDRG1:NM_001035009:20_cdna Constitutive 0 NULL GeneID:504499 14 GENE NDRG1 MGC127533 N-myc downstream regulated 1 EMBV3_06364 GGACTTTAAGTTCGTCCTCAAGGGCCATGGATCATATTCTCAGCCATATCCTGTCAGCTG Gene BVV0102_077623 + 0 NULL GK000016.2:54164616-55033949 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069625 1 XLOC_042018 NonCoding TCONS_00069625 XLOC_042018 NonCoding NonCoding - 16:54769403-54772732 - TSS51877 3140 2 TCONS_00069625_1 60 0.526114649681529 2 0.0570913461538461 0.0004852975076279 0.000729630849192156 0.000925399422567204 0.000171900937066183 0.000281450206135037 0.000203915125106534 0.000533706616727757 0.000510473447524189 0.000489993071801198 8.64828396487884e-05 1.45808137690124e-06 0 0.000113309145700555 5.09350045537668e-05 0.000271872057284374 0 0 0 0.000683978019132751 0.00136957839074753 0.000475662331733646 0 0 0 0.000476608857437708 0.000673133950029289 0.00066055333496982 0 0 0 XR_228539.1 LOC101904248 PREDICTED: Bos taurus uncharacterized LOC101904248 (LOC101904248), 9e-52 210 73.56 0.112738853503185 NR_034008.1 LINC00881 Homo sapiens long intergenic non-protein coding RNA 881 (LINC00881), non-coding RNA. 2e-34 152 72.36 0.0831210191082803 0 noncoding 0 0 0 0 0.308843611923326 0.330167097285845 0.00434444341772597 0.937242447125203 GCCCAGGCCCTGGGTATCTCATTCATGACCCAAGGCTCCCCATCTCTTCTTTGATTCCGGCTCTGAGATTCTGTTCCACAGCAACAGCAAGAGCAGGGAGCTGCTCTCTCATCACCTTTTCTAAACCAGATGGCAGGAAACCTTTTTTTTTTTCTCCCCATCAATGTACCCACTTGTGTGTCAAAGTGCTGCTCAGGAGGGTGTTCAGGAGCAAAGTGGATAAATGCTTACGTAAGGCAAATCATTTCCCTCAGGAGGAGGGAAGTCTTCTGCACAGTTCGTGTGGGGGCAGAGCCAAGAGAAGAAGATTGACTCATCCAGCCCTGGAAGACACGCAGGGTCCTAGGGGAGAGGAGCAGGTCAGTGGTGCAGAGATGGCGCGCTCCCTCCCCACCAGCTCCAGGGCGGGGCTCCTCTCTCCTGCACCAGCTCCAGTGAGTTACGCCCCATCTGGCGTGCAGAACCCACCCACCCCTAGCAAATCATTACAATGCTGCAGTTAGTGGAAACTTGCTGTCTCATAAAATCCCCACAGCCCTACAAGGGCAGTGCAACAAAATCTTCGTTAATAAGGTTCTCTTTTTCTTTCTGTCTGCCCATGAAGTAAAGGGATTTTCCCTACATTTGGCAAGCTTTAGCACAGAGAGACAATCTGGGGTAAAGCATACAGGTAATCTGGTGTGCTTGGCAGGATAATGGCCCCCAAAGATGCCTGTGTTCTAATCCCTAGAATCAGTGACTATGTTGGGTTACATGACAAAGAGGAATTAAAGTTGCAGATGGAATTAAGGTTGCTAATCAGCTGACCCTGAGAGTATCCTGGATTGTCCAGGTGGCCCCAATGTAATCGCGGTTCGTAAAAGTGGAAGAGGGAGCCAGAACAGAAGGCAGAGGGACTGTGGAAGAGGTTGGAGTGACATGATCTGAGAAGGATTCACCTGCTGTTGCTGGCTTTAAAAATGGAGAAAAGATGCCTCGAGGAGCTGGAAGAGGCAAAGAAACAGATGCTATGCAGAGCCTAGAGAAATGAACTGCCATACCTTGATTTTAGCCCTGTGAGGTCCAGGTCAGATTTTGACCTACAGAACTATAGCATTATAAACTTATTTTGCCTACATTTATAAAACTTATAGGAATCTGTTAAAGCAACTGTTAATGAACTGAACTGTGTCCTCCCCACCAAATTCACATGTTGAAATCCTAAGCCCTGGACTTTGGAATATGACTGCATTTGAAGATATGATCTTTAAAGAGATAGAATGAGGTCATTAGGGTGAACAGTAATCCGACAGGACTGGGGTCCTTATAAGGAGACAGGGACAGATTTACAGAGAGGGAAGGTCTTGTGAAGACACAGGGAAAAGAGAACCATCTAGAAGTTAAGGAGAGAGACCTCAGAATGAAACCAACCTTGTTGACACCTTGACCTCAGGCTTCTAGCCTCTGAAACTATGAGAAAATACATTTCTGTGGTTTAAGCTGCTCAGCTGGGGTACCTGGCAGCCCTAGCAGACGAAGAGAGCAGCGCTGGGAAGCTTATACACAGGGATGTACAGAATTCACCACAGAGGCCCCCAAGGCACCTAGATGAGAGCACCTAGCCCAAGATGCCAATTGGGGAGATACGGGGCAGCCTAGGTGAACACGGTGGCCACTGGACAAAGTAAAAAGGAGCAGGACCCTACGGTCCTTGTCCCCCACATCCTCTGCCTGACTTTTGTCAGGGGAAAAACTTTGGCCAAAGAAGTTTAATCAGAGAAGTGAGAACATGCCGAAACAGAACAGTCAAAGGAGACCGAATAATAATAATATAGTCATTAAGCACAGTCAAGGACTTTAAGTTCGTCCTCAAGGGCCATGGATCATATTCTCAGCCATATCCTGTCAGCTGTCTTGTAAATACTGAATCCCCCACCACTTGGAAGAAGTTAACTACATGATGACCAGACTATAGCCTTGAGAATTCTGAGAACTGGCCTTAAAGGAAATGGGAATAAACTGAGCATGGAACTAAAGATCAACTGTACTTAAAACAATCAGGATGACACAGCCTGGCCTGTTTAACGGCTTGTGAATATCAAACCAGCCAGACTCCACTTTCAGTTACAAAAGAACACAGCAGTGGTCTGCAAACCCAAAGACTCACAGAGGCTCCCAAGCACAGGAAGTGAACTCACCCACTCTCTCCCAGGTCTCTGTCAGATTGAATTAACAAGGATCCTCAACTTCTCTTATTCCTCTGAGCAGCACAAGGAGGCCCTTGTGGGCAGATAAACTGTATTGGGGCACCGTGTGGCTTCCTTGGGACATTGGATTTTGTGCTGTTGAAAAGTTGCTTTGGGTCTAGCTAGTCTGTTTCTCTTTGCATGGGTGCTAATTCGCTTCTTTCCTGTCTGACTCTACTCTGAGCTTATAGCCCTCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGAGTTGCCATCCCCTTCTCCAGAGGAACCTTCCCAACCCAGGAATTGAACCCACATCTCTTGCGAATCCTGCAATGGCAGGTGGGTTGTTTACCACCAGCACAATCTGGGAAGTCCATCTCTTCTTGAATTTTCTGTAAAAGTCCCATGAAATAATATCCCATTTGAATGACACCAGGACCTCATTCACTCAAGTTGGTAAGAAATCATTTTTTATGATATTTTACAATATCTAAAGCTTCCTAGCTTGGGAGCATTGAGGATTGATAAAAGATCTTTGCTTACAGTGATTATCCCCTCTGAGCTATTTCAGCTGGCGAAGCTGCCGTTTACCTCTGCCCTATCTTGGAAAAAAGGTTTTGCTAAACAAACACAACATATAAACAAGCATCGTAAAGAACTTGTTTAACCTGCTCAAGAGAACACACTGGCTTCAAGTAATTTAGCCGCATTCATTTGCATCCTGACAGTTCATTTGCCTTTATAATTGGGTTTGTTTATATATTAAAGGAGACTCACCAAAAATTCTACATCAAACTATTTTAAACTTTTCTGATTAAACAATGTATGTCTATTGAGGAAGAAAAACAGATGATACCAATGCCCAAAGAAGAGACCAGGAATCATAAGATTGTTACTTGGAAAGAAATATTATTTACATTTCCTCTACCTCGG TCONS_00069627 TCONS_00069628 s 3' 287702 TCONS_00069627 TCONS_00069628 s 3' 285463 EMBV3_30385 TTTTAAATGATAGCCGATCTTCTGCCGTCACCTACGAGAGAGGGGACCGACAGTTGGCTT Gene BVT0102_024023 + 0 NULL GK000002.2:133376608-133386631 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106937 TCONS_00106938 TCONS_00106932 TCONS_00106933 TCONS_00106940 TCONS_00106935 TCONS_00106934 TCONS_00106936 TCONS_00106939 1 XLOC_062943 Coding TCONS_00106940 XLOC_062943 Coding Coding OTUD3 2:133382397-133418477 j TSS78610 5864 1 TCONS_00106940_3 295 8 0.837689514676127 0.000170580533527932 3.88169760514796e-06 0.00339926076614337 0.0011669283141679 0.000916295503540119 0.000688479683297026 0.00212670378549493 0.0018647521597477 6.20370021861037e-07 0.000317226288231879 9.25972503103107e-09 0.00013018927218832 0.000287198774910758 0.0016422075205973 8.09899127963089e-07 0.00179880694382148 0.000381802403271758 0.000261634745162211 0.00385590754577826 0.00341968437432208 2.36227662162056e-05 3.57730211480548e-05 0.000501820685923539 0.000464294098897545 0.00330033482734172 0.00235601916401785 0.000893275260949338 5.56071933479427e-08 0.000127430324471513 7.87997176362079e-08 XM_002685731.2 OTUD3 PREDICTED: Bos taurus OTU domain containing 3 (OTUD3), transcript 0.0 1.044e+04 100.00 0.986869031377899 NM_015207.1 OTUD3 Homo sapiens OTU domain containing 3 (OTUD3), mRNA. 0.0 2547 74.39 0.669338335607094 TCONS_00106940_3 sp|Q5T2D3|OTUD3_HUMAN OTUD3_HUMAN OTU domain-containing protein 3; 0.0 539 87.84 0.996610169491525 0 coding 0 0 0 0 -0.894399229258575 0.0121051978492805 -0.459219381509629 7.42487505254843e-05 GCCACAGGAACTTTCTGCCTGGCATCCTACCTTCAACACATTCTCCTAACTAAAGCCAAAGATATATTTTAAAGCAATTGCCTCTTCAGAGCTCTTGGTGATCAGTTGGAAGGACACTCACGAAATCATGTCAAGCACCGACAGGAGACAGTGGACTACATGATAAAGCAGCGGGAAGATTTTGAACCCTTTGTAGAAGATGACATTCCTTTTGAGAAACATGTGGCCAGTTTGGCAAAGCCTGGAACATTTGCTGGCAATGATGCAATTGTAGCCTTTGCAAGAAATCATCAGTTGAATGTGGTGATTCATCAACTTAATGCCCCTTTGTGGCAGATCCGCGGCACAGACAGGAGCAACGGGCGGGAGCTGCACATCGCGTACCGGCACGGCGAGCACTATGACAGCGTGCGCAGGCTCAACGACAACTCAGAGGCGCCCGCACGCCTGCAGACGGAGTTTCAGATGCTTCATCAAGATGAATCAAATAAAAGAGAGAAGAGCAAGGCAAAGGGAGTCGACTCTGAGGATGACCTGCGAGATGAAGTAGAAGATGCTGTCCAGAAAGTCTGCAACGCAACTGGGTGTTCTGATTTTAGTTTGATAGTTCAGAACCTAGAAGCTGAAAATTATAATATTGAATCTGCGATCATTGCCATGCTGCAGATGAACCCGGGGAGAAGAAATAATGCAGAGGAGAAGCTTGAGCCCAGTGGTGGAGTGCTGACGCAGTGCGGTCCTTTATGGGAAGAGGGTGGCAGTGGCACCAGAATCTTCGGAAATCAGGGTGTAAATGAAGGCAGGACCGAAAGCAGTAAGGCGCGGGCCAGCCCTGCTGAAGAAAACACAGCAAATAAAAACCAGGTCCCAAAGGTCACAAACAAACAGAGGCGAGAGCAGCAGCGACTAGAGAAGAAGAAACGACAGGAGGAGAGGCACCGCCACAAAGCCCTGGAGAGCAGGAGCCACAGGGGCAGCAACAGAAGCGAGGCTGACGCGAGCACCCAGGTCACCTTGGTGAAGACCTTCGCGGCTCTCAGCATCTGACTCTGGCCTCCTGGGAGTTGGGGAAGCGAGTGGAAAGTGGAGGGCTGTGTGCCAGGCTTTCCAGTGAGGCCGTCCTTTTACAGAACAAAACTCAACCCACAGAATCACTCACTGAGTTAGTTTCCTTCAAGCTGCCTCTTTTTTGTTCCGAGTTTTGTCCAGTGATGTGTTTTATTTAATGAAAGTGCAGTGAAGCCATTCATGTTCTGTGTTTAAAATACCGAGTTTTAGGGGTGGATAGTTAGGTAAAAAAAAAAAAAACACAAAAAACTTTTAAGTGTGGTTTTATTTGTCCTGAAAATTTAGAGTCTGGTGACCCTGGGATCTTTCCTTAACACTTGGGGTGAGTTTTGCTGTAATTGTGGATGAAGTAGTTTAGATTAATTGCTAGAAATTCAGAGGACAAGTTTCCTTTGTTTCTGTTTCATTTTCAAACAGACATTAATATGCAGGATAGTTTATAAATGATCTCCAACTCAGGTACATGTTTAGAATTAACTTTCTTCTACTCCAAGTTAATCAGAGAATAATTCAGGAAATGTTTTTCCAAAGTAATGTGATAGGGAGGTTGTGGCCTGTAGTCAGGGTGGCGGTTAAACAACCGCGTTTCTCTTCCTGGTGGTGATGTTCAGATGGGATTGCAGGCACTGCCGGTTCGTTTGTACTCAAGCCATATGATAAATGGGCCTGACTGTTAACTAGGCCTGGGCCTTGCGGGAAAGTTGGTCGTGTTGCTGAGTGTTTGATACTTGCTTCTTGGTGGTAAGAAGGTGTTGCATGACTGCTTATGATACAGGTCTGGGATTCTGAAAGCATGCAGTCCAGAATCCGTAGTTGTGAAGGGAAAGATCACGAGAGTCTGAGGTTTTGCACAGGAGGAGTCTGAAGAGTTCTTTTTGTTTTGTATGGAGAGAGTGTCTGGAAGACTTGCTAAGGTTTTTCATGTTCACATTTTAAGTGAGTGACTGTCTTTTCTTACTTGCTATTCTAGATTTAGAGAGATTCCTTCAGAGGGAAAGTAACTTGAGCTGTTGCTTAATTTGTTAGTATTGTGAAAATGAAATCCCATAAAGTGCTGCACTTTCTTCTTTCTAGTTAAGTCCTGATTGGGATTTTGCTCTTGGGAAAACTCTCCAGCACCCTCTGGAAGTCGTCAGGGACTTAGGTTAGACCAGCTGGGCTGAGAAAGCACTGTGGCTGAGGCCCTGCCGTGGCTGCACAGTGCTGAAATAGTCGGGTTTGGGCAGTGGGAGGCGTCGTTCCTCAAACTGAGTTAGATGGATGTGAGCTTTCAAACTGACCCTTCAGGTGGCCAGTCTTGGACCGTTTTGCCTTTTGAGGACCTGGTATTGGAGGAAATACTATGTGCTGAACTGAAGGGTGAACTGCTGGTTTTCTCCTCCATCTCAGGTTTCAGGGTCACAGGAGCTCCAAGGCAAGCGGGAAGCGCCAGGACGGCTTCGACGCGACAGACACAGCGGCGTGTGGGCTGCCCTGGGGCTCAGCGGGTTGTCTCTATCGGCAGGCGACTTGCTTTCTTTGGTTTTGATTATGTGTTTTAATTTTCTGTGTGTTGGACTTTGGTAACTTTCCATGGTTGGAGCCTCAGTAGTCTCTTGGGGGTTGCCCCCAGGACACGCTGGTACAGTACATGAGCCTAGCAGGTTTAGAAACGACAGAGCGTTTTTTCTTTGCACACTGCAGAGTGTGAGTAAGAGCTTCTGGCGCTCAGTGCGAGGAGGTGAGCCGTCTCTGTTGCCTCGCTGTCTCCAAGGGAGCGCGCACCACTGCTTCAGGCTCTGTTCTCCTGGCTTTCCACTGTGGCCGAGCATCTGAGTGGGTGCTGCTGCTTGAATGTTTGTACTGTGAAGATTCAGGAGACCAGCTCCTCTCACACGATTAAGCAGTTAGGAGTCTGAAATAGCTGAGGGAGACCCATCGTCAGAAGTAGGATTGCTTTATTTTCATGGCTAAAGATCGTGGCCTTGGGCTCTGTTGGGTTTTAGAAGTTGCTAAAGAGTTACTATAGAATATTGGGTGCATTTATTTATGAATTACCTAATTCTGAGGATGCGCTTCGCCTTTTCTTGGGTAAAGTAACTGGTTTTAAAAACTAATCTGGTGGCTTCAGTAATTGTCTTGTATTACTATTTCACAGTTTTCCAGTTATAATTGGTCTGTGTTCAGTATGTTAGTTATTAGGGATGGGGCACATGTATCCAACTGTAGTGATATCTTCTAGCTAAGGGTTTAACTGTAAACCTCACTGCCTCTGTCCCACCAGAGTATGAGGTAGGTGCAGTCCATGTGGTGGCTGGTGGCCTTGGTAGGCTCGGGAGAACCCCCTTATTGGCAGCCAGGTGGGGGCCTGGCGTGTTTGCTGCTCCTGGGCTGACTGCTCAGTGCCGGTTGCCCGTGCAGTTACTCAGGGGCACAGCATAGTGAGGAGTGACGTTTTCTTAACCTCTGAGGCTGTTAGATGTTTGTTCTGGGGGGTTATCTCCGTAGCTTTGGTCAGGAGAAAGGGGATGGGGTGGTGGTCCATAGCTGCTTACTTGTCTTATAAGCTGTACATAAAAGTTTCTTGAATTTTTTTTAAAAAAAGATTTTTTTTTAAGGTCAAAACAAGAAATAAAATTTTAGTGGCAACAGCTTTGTACTAGAGAGGTAGATGCATTAAAACAGCATAGAACCAGAAATTCTAAATTAATATAGTTGCCACCAGGAGATGTTAGAGAGAAGTTGTGTATGTATATTGGATTTTTCAATAATAGCGTATGCTTTTAGGAGTGAAGTCTGGCTGAAGAATTGTGGCAGAAAGGAGTCTCAAAGGGTCGAGCTTGTCTGTGGTTCCCCCTGTAAGCTCTGAATATACTTCCACACCCCGTGTGATTCCGAGGGCTGGTGAAGTGGGAGCTCTGCTGTGGGGCAGCTGGGGCCGGGCTTGGAGGGGGTGGTTCCTGACGCGCCGCCTCCCCGCCCAGGGAGCTCTGCCGGCGACGGGGGCGCCGCGCCGTGTTCCATAGGTGGGATCAGGACTTGGCGCGGGGCCGTGCCTGCCTCGTGGGAGTCCTGTCCTCGGTGTGCAGTCTCTCTCACTCTGAGAAGCTCTCTAGACTGCCTGGGCGTTACCAGGTCCACAGGGAACGCCGTCAGGTTACCTCTGTGAGACGTTCAACCCAGAGCGTGCAGTCGGCTGAAGGAAACTCGGGTTCCTCGTCAGGGCTGGCTCACACTCAGCCTGGCCAGAAGGGTCGGTGTGGGCGGCGTGACGGGGGAGCTTCTTGCTTTCGGTGCCGTGGCCCTCTGGCCCCACTTGGGGTAGACGCGTAGCTCTTCACCTTTTTACCTCAAGGCTCTGTCTATCTGTGGCAAACCTTTAGACTCAGAGTCTGATGCAGTTTTTTTGTTTATTTTTGTTTGTTTGTTTTGGCGTTTTCATCATTCACTGTTTCGTCATCTCAGCTTTCAGAACAAGTGTTGCTCAGACTCTGGGGCCTCCGACGGCTGTTCTGAGGCGATTTGATAACGGCACTTTCCACAAGGTGTGTCTTTCTGACTCTAAAGCAAACTGTATGTTTCCACTGATGTCGTTAAGTTGAAGATCTCGATTTTAAATGATGGCCGATCTTCTGCCGTCACCTACGAGAGAGGGGACCGACAGTTGGTTTGCAGCAGAGACACTGAGCAGCAGTCACGAAGTGCGTGCACGGAACTGAGCTCAGAAGGTGCCCCCAGAACCCGGCCCTGGGCAGGATTTGGGCCTTGTCCACTGCCTGTCCCCATGTGTCCAGGGTAACATGCCCCGTGAAAACCTTAGGCTCTTACCCATTTCCTCGGAGGGATTACCTTCTAGAGTCCTGCTCCCATAGTTCAGACTACTTTGTAACTCGATTAAATTGTCTAGCATCCTTGCAGAGTTACTCGAGAAGGAGCTGATGCCAGTGAAGAAGAATTTCTGTGAAAGCGCGAACGTGTGTGTGGTGACCTTGCTGTGAGCAGGGCGTCCCTCGGTCCAGAACCACTGGTGCTCGCTGTGCCGCAGCGCCGGGCAGTCACGACCACTGGGCAAAAGCTCGGCGGCCCAGCCTCCCGCTCCCATCTCAGCATCCACCGGGGCACCGTTGCCAGCTGTCCGTGATGGGGGTTTGAGTGTGGCCCCAGGCCTCGGCCTGCACGCTGATCCCTCGGCCACAGCTGGAGTGTTGCTGGGGCTCCTCTCCTGGTTCATCTTCTGGGGGGAACGGCCCTCGGCCTCCCCGGAGCAACCCTTCCAGCATCCACCAGCAGTGAGCACCGTGAGAAGGGAGGAGCCGGGAGCCTGACGGCAGACCTCTGTTCCCCGTGCTAACGGGGAAGCGCTGGTGGGCGTTAGTCCCCTTGACGAGGGAGGGCAGGTGGGTCTGTGGAGAACACCAGAGCCCCTGTGGCTCAGCCACCTTCTCTTTTTCTCCTAATTGCACTATACTTGCTCTCGCTGCAGTCCGGAGATACCCAAGACCTCCGTGGGGTCGTGACCCAGAGACTTGGCAAGTCTCGCCTTATCTGTGGAGCTCGACAGGGAGAAATGTGACCATTGTCTGATGTCTGTAGTTCATTTCTTCCTTCTTTCCTTGCGTTGTGTTACTCTGAAGCGTTTTGTTTTTATTTACCAAAGTACTGTACTTGGCTATTTGCAGTGTTTCCAAAACCAAATATTTTCCTTTTTTGTGTTTTTAATCTTCAACACTTGGTGCAATAGAAGCTGCAAAGATGTGCCACTTTATCTACGAAATGGAGTTTTGTACACCAATAAATTCTAGTTTAAAGACAGAGTT EMBV3_04386 AGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAGCAGGTGTGTAACCCCATCATCA Gene GeneID:282254|HSPA1B:NM_203322:42_cdna Constitutive 0 NULL GeneID:282254 23 GENE HSPA1B HSP70-2 HSPA1A HSPA2 heat shock 70kDa protein 1B EMBV3_26006 GTCTTCATTGCTGCACGTGGGCTTTTCTCCGGTTGCTGTGAGCAGGGGCTACTCTTCATT Gene BVV0102_311382 + 0 NULL GK000019.2:28618061-28638454 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29759 TGAGAGAGAAAAGAGCAAAGCTTGCAGAGGCTGCAGAGAGAAGACAGAAGGAGGCTGCAT Gene GeneID:100295769|LOC100295769:XM_002687409:126_cdna Constitutive 0 NULL GeneID:100295769 5 GENE LOC100295769 NULL hypothetical protein LOC100295769 EMBV3_11477 ATGGGAAATACATGGCCTGCTGCCTGTTGTACCGTGGTGACGTGGTTCCCAAAGATGTCA Gene GeneID:787568|LOC787568:XM_002685617:278_cdna Constitutive 0 NULL GeneID:787568 2 GENE LOC787568 NULL similar to Tubulin, alpha 1 EMBV3_21736 TGATGTCAAGTTGGTTGCTGATTTCCGAAGAAGATAGAATTCTTAGAGAAGAACTTCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29119 CAAATGCCAGACCATAGTCACCTGGGAAGAGGAGCAGCTGGTTTGTGTGCAGAAAGGAGA Gene GeneID:539418|CRABP1:NM_001101192:58_cdna Constitutive 0 NULL GeneID:539418 5 GENE CRABP1 CRABP1 CRBP-III cellular retinoic acid binding protein 1 EMBV3_13340 CTTACATGCACTCTGAAGGTATCCTTGCTGGTGAGTTGAAACATGGCCCTCTGGCTTTGG Gene GeneID:281779|GFPT1:NM_001109961:8_cdna Constitutive 0 NULL GeneID:281779 11 GENE GFPT1 MGC165731 glutamine-fructose-6-phosphate transaminase 1 EMBV3_36932 AGTTGTTCAGCGCTGCGGGACAGGATTGCGCGGAAGTGGACGCCGTTCTGAGGGAGATTT Gene GeneID:100301340|LOC100301340:XM_002696330:16_cdna Constitutive 0 NULL GeneID:100301340 20 GENE LOC100301340 NULL similar to geminin EMBV3_31573 TACTGCCCAAGCTTATCACCGTGTCAGAGTCATCTGCCCTCCGTGTCTCATTTCCCAGTA Gene BVT0102_118850 + 0 NULL GJ060138.1:1-23180 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14205 ACTGCTGGTGGACGACGGCATCCTGCTGTTCAAGTACTGGCTGTGCGTGGATCAGGAACA Gene GeneID:100336850|LOC100336850:XM_002683905:2_cdna Constitutive 0 NULL GeneID:100336850 Un GENE LOC100336850 NULL hypothetical protein LOC100336850 EMBV3_37962 AACTGCTTACCTAATTTGACAGTATGACACAGTCAGCTTCCATTTGTAGTTGGAAGTAAG Gene BVV0101_076635 + 0 NULL GK000017.2:24420009-24424870 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27164 CCTCCCCCAGGGTTCACCTGCTTACAGGATTTAGACGAGGGTAACATTTCAGGGCAGTTT Gene GeneID:514852|TAX1BP3:NM_001034474:102_cdna Constitutive 1 NULL GeneID:514852 19 GENE TAX1BP3 MGC127727 Tax1 (human T-cell leukemia virus type I) binding protein 3 EMBV3_01386 GTCCTGATCCTGTCTGTCCAGCCACTGTCTTTTTATACAGAATGGATTATTTTTTCCAGA Gene GeneID:100125307|FAM119B:NM_001103340:853_cdna Constitutive 1 NULL GeneID:100125307 5 GENE FAM119B MGC151800 family with sequence similarity 119, member B EMBV3_10354 AGAAGAAACAAGCAAAGAAGCCAAAATCAGAGTCTCCCCAGAAGAAGCAATAAAATGGGG Variant GeneID:613624|RGS18:XM_002693931:34_cdna 303^404 1 EMBV3_37099 GeneID:613624 16 GENE RGS18 NULL regulator of G-protein signaling 18 EMBV3_00077 AGGAAGAGAAGGACAAGGCCTGGGAGCGGGATCTGCGGACATACATGAACCTTGAGTTCT Gene GeneID:617553|BAT4:NM_001076468:207_cdna Constitutive 1 NULL GeneID:617553 23 GENE BAT4 MGC142337 HLA-B associated transcript 4 EMBV3_19335 CCCTTTTCCTCCATAATTTTTGATTTTTAAGAAAAATATTAGCACACATTTCAAATTAAA Gene GeneID:531488|WASF1:NM_001034017:47_cdna Constitutive 2 NULL GeneID:531488 9 GENE WASF1 WAVE1 WAS protein family, member 1 EMBV3_26724 GTGAGGAGGCAGGAAGGATTGGGATAGGGCAAAGGTGGTCAAAGGGAAGTTCAGAGGTTT Gene BVV0102_343859 + 0 NULL GK000026.2:42717177-42782329 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12703 AGTTTGTGAAAGGTGTAAGGTCTATGTCCAGATTCACTTTTTTTAAATGTGGATTCCCAG Gene BVV0102_459997 + 0 NULL GK000004.2:81644524-81665557 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182209 TCONS_00182207 1 XLOC_110794 Coding TCONS_00182207 XLOC_110794 NonCoding Coding C4H7orf11 4:81642399-81655808 j TSS136205 12253 7 TCONS_00182207_1 82 0.566718354688648 2 0.0862917661097852 8.03292620985236e-17 1.70487660858969e-06 5.04074174213042e-09 7.36766639179427e-08 3.73775796750974e-08 2.8864161514273e-07 1.85909711825494e-06 2.82634345427747e-14 6.86833097969592e-09 1.11970962471351e-07 1.81280790231057e-05 1.1239816966207e-08 3.50580283302052e-05 0.000169440977002778 0.000337942256102423 0.000195819267707074 0.00031576419819389 6.81322790846358e-05 9.44334867362133e-10 1.25643004680429e-06 0 0.000111112360347339 0.000495967051074772 0.000589174466278591 6.66268952298417e-09 0 1.65645204950396e-08 1.43832646416604e-06 3.26902393072647e-08 9.34698803310276e-05 XM_005205629.1 MPLKIP PREDICTED: Bos taurus M-phase specific PLK1 interacting protein (MPLKIP), transcript variant X1, mRNA. 0.0 1287 100.00 0.058108218395495 NM_138701.3 MPLKIP Homo sapiens M-phase specific PLK1 interacting protein (MPLKIP), 9e-173 614 86.64 0.041132783808047 0 noncoding 0 0 0 0 0.00444864517708757 0.976150046235789 -0.00477242168085595 0.918079376924055 TGCTATATAATGCTGGAGGACGGAGGAGTGTTTTGGTGAAGGACCGCCAAGTATAAGAGAAGGGTTGCTCGCGACAGTTCCGGCAGGAGAACGCGCCAGTGAGATCCTTGTCGTCGTCCGCTGAGATGCAGCGACAGAATTTTCGACCCCCGACTCCTCCTTACCCCGGCCCGGGTGTAGGAGGTTGGGGGAACGGGAGCAGCTTCCGGGGTACCCCGAGCGGAGGCGGACCGCGGCCGCCATCCCCGCGGGACGGGGTTCTCCAAGGACATCTACACCATTTGGATCAGGGCGTGGTAGAGAAAAGAGAATGTCTAATGAGTTGGAGAGTTATTTCAAGCCTTCAATGCTTGAAGACCCTTGGGCTGGCCTAGAACCAGTATCTGTAGTGGATATAAGCCAACAATACAGCAATACCCAAACATTCACAGGCAAAAAAGGAAGATACTTTTGTTAACATTTCTGAAATTCAACTGGACGCTTCATGTGTCAGGAACATCTTGGACAAAACTTTTACTTGTAATTAAATTGAAACCTAACATGGTGACTTTGGGTAATTAGTTGTGTGTTTCATCATATCAAGTATTTTTGGTATTACAGAAGACATCTGGTAGGATAATTTGCAATATTTAGCTCTCTGGAAGTGCCTACCACAATTTAGAAGATTAACATTTTCCAAATGCTTAACATTCTTGGTTATATAATGGACATTTGCCTTTTAATGTTTTTTCCAGTGTTTTAAAATAAAGCAGTTTGTCTTTCTAGCTATATTGTGCTTTTGTCATATGCTAAAAAAGAATTATTAAAATAATGCTTTGTAATCACATAGTTAGAATTCATAAGAATATATTTTGGATACTGCTTTTGAAAATAGACCATACTTTGTGCTGTAGACAGGTCTATATATTTGTTCATAGGGAAAAGGGGGTAAAGGAAGAGAATAAAAAAAATTTCTATTCATATTATAACCATTGTTCTGTGTCCATATTTTATGAAATGCTTTTGTAAAAATGCATTGAAACTTGGTAGAAAGTTAGAGAAACCCACTTACGCTTAAATTTAAAACTATTTCTAGCCTTTATACTCATTTAACTGAAAAAGGCAAGGATGGACCTATTTCTTGCATAGCTAGATTAAAGAATTCTGCGTCTGAATTTCTCTACTCCATATCTCCCAGTATTGTGGAATTATTTTCTCTTGAGTCTAGGAAGATGGCTATCAGCAGTCTCAAATCACTTCCATTGTGAAGAGAATATTTCCCAACTCTCGTCAATCCCAGTGAAGACAGATTGGTCATGCTTGGTCTTTTTTTGTAGTCTTGATCCAATAACTATGATCAAGGCAGCGTAGCATAATAAATTTGAACATGGACCCATCCCTAGAATGAGGCAGAGTCCCATGATCTTAGACCCACTAGGCCTACCGGGACTAAAGAAAGGTTTTCCAAAGGACGGAATGCTGTGTACCTATGCCTGTGGTAATGAGAAAAATATAAAGGGATTTTCATTTTCCCCAACTATTTAAACAAAACTAAGTCTTAGAACATTCAAGCTTTTTAGGTATTTTGGGGTCAATATAAGATGAAAGTATAGCTCATTAAAATTTTGTTTAAACATTCCCAGAAAGAAACTTCTAAAAGGGAAACGGTCACACCAGTTATTTGAGCCATAACCAGTTCTATTTGTATGTTAGGTCTTTCACAAAGGCAAAACAGAAAATAAGGATTTAGATTAATAAAAGCTTCATGAGACTCAGGACTACTACTGTTACTATATTCTAATACTATTACTATACTGAAAGATGAAGAATAGAGAAATTCAGAGGCAGGCTAGTTAGGTGAGTTATTTAACTTCTCTGTGCCTCAATTTTCTTATGTGTAAAATGAAAAAATTAACAGTACCCATGTCATAGAGGTGTTGTGTTGAGGATTAAATGGGTTTATATGCGTGAAGACTTAGGCCAGAGCCTGGCACATAGTAAGCACTCTAAATGGCAGCTGTGACTTTCTCACTCACCCCTATATCCTCAGCTCTGAGGATGATGCCTGGAAAATAGTAGCTGCTTAATAAATATTTGGCGAATGGATGCTGACATTCTGATTACAACTACTATATTGCTCTGCCTTTATCTGCTGTATACAAAGAAGATAGTAATTTTCCCCCCAATATTCTAAAGGGAATGTCCTACTTTTCTTAACGTCTTTCTAGATGATTTGAGGTCATGATGTGTGATGAAAATTAGAGCAAGTAGAATACTTTTATTGAACTTTGTAGGTAAGAAAATCTCTAAGAAATGGGATTTAGAAATAATTATTAGGCCATTGCTTAGAGATCACTGGATTATTGACAAAAAAAAAGTCCGATGTTTTATGTTAATATATATTAGCATATTTGTAAGACATTCAAATTATAATTTTCTAATGGCTTATGTACATTTTTACTAGCTATAAGTGTGATCTTAAACAACTAAATGTAGAATTTATTTTTTGCCAAGTTACCAACATCTGCTTCCAGATATCTGACCTTTCTGATTTTAAAAGAAACATTTTTGTCCTCGGTAAATGTAAATTGCTTTTTTGCTCTGGTTATTAGTGTACATAGTTATCAAAGGTCTTTAAACATTGATATTGATTTGTTTATGTTACTAGCCTATTTTGTTTAGCTGAGTGAAGAAATTGATCATTCTTTTAAATGAAAAATGACTTTTAATCGTTTCAGAATGCACATTTTTACCTCTGTAGAAATGTTAAATAACTTTTTTAGGGAAATTTATAGTTAAGCATGCTTCTTAAATATTCATATAGTTGAAGAACAGAAGTATAATCTATAGCTGGGTCTTAAAGACAGAGATACCTTTAAGGGATTCAGATCCAGATCCTCAGATCCCAAATGTACTCTTTGTTAAAATGATGTGTTTAAAAACATTTCTGTCATCAGTGGATGATGCTAGTTCTCTATTTTCCCTTCTGCCTTTTCATAATTACCCTTCTCCCACTTGACAAAAGATACCTATGGCAGCTTTTGTTTTTCAAAAATGATACCAACAATATTTCAGGTCCCTGAGACTCCTAGAACCTTTCTGTACCTCATCAAGATGTAAACTTATGTCCCTGGCCTTTCAACTTGAGCAGACTGTTCTGACTGCCCAAGGAAGTATAGTGAAAGTTAATTTATTTTCATTATAGGTGAAGTGTGGTCTTAGAAATCAGTTATATTGGCCGATGTGGGGATACAAAGATAGAGCTATGACAGTTTTTGTTTAATGACCTTGCCTTTCCTTTTTTGTCTACTGACTATTCAAAAAAGGATTTTTCCTTTGTGTGAATCATGTGAAAGTAAAACAAAGAGAGCATGAACATAACATGAAGAGAAAGGCACCTTATTTTTAGGAAACAAATGATAAAGTTGCTTGCCTTATCTATCTGTCTAATCTATTCAATATTGGTATAAAAGCATGATGTGTTTTGGTGAATCTGCTGTCAGGCAAACTGTCTTTTCCCCACTTTCAATAATGATAAAGAGCCTGATGAATATGTCTCAAACCTGTCTTAATAATATAATTTGCATGATTTCAAGAAGAAGTTAAAATGTCCATGTTTATTTCTGATATATTAACCTTAGATCTTCAAGTTAAAACATCTTGTTTCAGAGGTAAGTTTGTGGTTTTTATATTTACTAGAGCATTTTTCAGATTCTTTCAAAAAACATTATTATCCTTTGCCAGTTCATTATTAGATTCTGTAAATCCATATTAATTTCTTACGTGGCCCAAGCCAGCTACTTACTGTCTTTGAGACATTTCTCTCTTTTTTTTTTTCATTTCTACTTTGTGTTTACATTTAAATTAACTGAAACATATTGTGGATTTTACCCTAACTAAAACATTGTAGTCATAAGTATGTGTTGTATAAACCCTGAACTTAGTAGTGACCCAACATCTTTGCTGATTTGCTCTTAATTTTTATTCTAACATTCATCTAAGAAACTGTTATTACATGATTATATATAATCCCTTATGTACCACTTAGTAAAAATACTGCCAACTAAACTATAATATGCTATTGATTATAGGTTGCATCTCAATTTCAGAGATGTTAAAATGTGCATCTTAGTTTGATAAAACACCTTAAACAATACTTTAAAAAGCAGAACATCTATTCATGTATAGGTGTAAATGTTTTACAAAACAGTCTAGGAAAGTTCATGTAAAAAAAAAAAAAAAAATGTTCATGTAACATTAGAAATCCAGCTTTACTTAATTAGGATTAATTCTTCTCAGATATTTATATTCTGTTCTAATTCTGTAAAAGGCATACTTTTTAAATGTAAAATCATGCTTCTAACCTATGTAGAGTTATCCTCAATAAATATTTGCAATTTCCAGTTTTATGGGGATATTTATGCTCTAGATTGTCTTAATTTTAAGCTCCATAAGCAAGATGATGCTCAGTGAATAAGTGATGTCTTGGTAAAGACATCTTGATGTCTTAAGTTTCCAAGGAATTGAGAAAGAAAATGGCCTGAGCAGCAAAAGACTTCAGTGAGGGTGGTTCTTCAATTGTTTTCAACAAAATTGAAAAAAGCTTAATCAGATTATCAATTAAATATAATTAAAAATAATCTGATGATCAATTTATTATTTCTGGCATATAACTGAAAAAGTGACATCACTATAACAAAATTTTGTCCCTTTTCACTTTCAGCATTTTTATCTATAGTTTAAAAATAGTAATATAATTGTCTCATTCTAGCAATTAGTAATATTTATGGTGTCTTTATTTATTGTTTGAATAGTAATGATAATCCAGATAACAGTCTTCAAACTTGAAGGTTTATAGCCGTTTGAAATAGATTTTTTAAATTTCAATATATTTTTCACACATTTTTGAGAAACAGGTGTATGACAGGATATCAGTAAAGGACTTCTAAACATTACACTTTCATTACAATGAGATAAAAGTTACGTGGGGAAATAAAATAGAAACATGAATTGGGAATAAGGTAGTGTAAAATTTCCTACTATGTTAAGGAGTGTTTTTAGATAGCAAATTACTATGACAATTAGCTTAAAAAGTCAGTGTTACTGAATTGACTTTCTTTGCAAGATTTTGAAACTTAAAAATGTTGTTTTTATGTTAAAGTAAAAGGGTACATCACTTCTCAAAATTACTTTAGAAAATATATGACTAAAAAATTTAAAGCTCTCAAATCATCAGAAGAGGGAGAAAGAGGAATATGGTAAACCATAAATCTAAGAGATGTCAGGGAAGGAGGAAAAGAAGTAAATGACAAGAGTAAATCCAGATGTTCCAATAATAACACTGAATCTTAAAAAAGTAAAATCTTTTCAAAGGCATATTTTCAGATAAGATTAGAGATAATGTAATCTATTTGCTGGTTAAGGAAAGATACATCTAAAAAAACTATAAAAAGATTCAAATCACAGAGGGGATTTTAGCACACCTCTACATGGTCCATAGGGTTGCAGAGAGTCGGACACAACTGAACCAACTAAGCACGCACTGGACATGGATATAACAAGCAGATATAGGATTTGCAGGGAGAAAAAAACCTGGTATATAAAATAGAAATTATATGTAATATATACATATTTTTTCAAGTACTTAACAAATTTTTTATAAATGTTCCAAATCACAGAGTCTGCACATTTCAAGGATTTGATGGATTATATTTCCTGACCGAAAGTGTTCAGTAAATTTAAAAACAAAAATATCCTCCCTCAAAAAATTAGTAAAACAGAAGACAAAATTATGGAGAATGTCAGCAAAAACAAACCTATTCATTGGATTAACTGAAGTCTATAGAAATTGATGAAAAGGAATTTCCCTGGTGGCCTGTTGGCTAGAATTCTAGGCTTTCACTGCCATGGCCTGGGCTCAATTCCTGGTTGGGGAACTGAGAACCTTCAAGCTGCATTGTGCACCAAAAAAAAAATAGTATTGATGAAAAAAAGCAAACATGTAAATATTAAGCTTTGCTGTGACATCAGGAATTATGCTTGGAAAAGGACTACAGTAGGGAAACAATAGTGATGGAATCACCTAGAAGAATAGTGAAATGAATCATCAGTTGCATCATCCTTCTGATTTCTTTGCATTGCCTTACTAAATCCTACATCACCTGTCAAGAGGGTAAAAGAGGTCTAGAGACACAATCTCTGTCAACGTTTACTAAGCTTTTACTTGGGGACAATTAGGAACTTGGCATTTTTCATTTTTCATCCATAATGGTAAGGAAAAGAAAATTAAGGGCTTCCCAGGTAGTGCTAGTGGTAACGAACCTGCCTGCCAGTGCAGGAGACACAAGGGATGCAGGTTTGATCCCTGGGTTGGGAAGATCCTCTGGAGAAGGAAATGGCAACCCACTCCAGTAATGTTGCCTGGAAAATCCCATGGACAGTCCATGGGGTCACAAAGAGTCAGACACAACTGAAGCGACTTAGCCACAGCAGCAGGAACTTAGCATTTTTCTTTTTTCATCCATAATGGCAAGGGAAAAAAAACTGGTTTTTCATGATTATTAAATGAATCAGCACTCTGGACTCTTAAAAGCAAACTCAGACTATAAATTTTCATATGACAATATCCTAGAAAATTTTTCTCACGCTCAAGAATCAATGAATGAACAATACTTCTAAGGACAAAAGAAATAAGATGCTCTCATTTACTCAGTTATCCAGAAGGAAAGATGTCGTCATCACTGTACTTTGTGACAAGAACATCTTTTATGCTTATTACTCAAAATTGTAGGTAGACAAATACTGAAGGCAGATGTATATTCATAATTTATTGAAAGGCAATAAATGATGTAAAAGTGAAAAATCAGTTGGAGTCACTATTCTAATTGCTGTTTATAAATCTGAAAGTGAAAGTGTTTTGCAATTATGAGGCAAAAAAAAAGATGATCCTTTTCTTTACAGAAACATGACATTAAAGTTCTTAAATGTATTGCATTATGAAGACGCAAATGTGAAAAGAACAAGAAGTGTTAATAAACACTAGTGTGAAATACATTAGAGATGTATTTAAACTCTGGAGTCAGGGTTCATAAAATGAATATAGTCTAGGTTCATGACAGTGGATGAACACATATTTATGTTCATGTGATTGATGCTACCCATCTTGAAAATTAAATACTCTCAAAACCACAAAAATAATAAAATTTTGGGTTTCCTATGTCGAAAATTAAATACTCTCAAAACCACAAAAATAATAAAATTTTGGGTTTCCTATGTTTACATTATTATTAAGATGTCTAATAACATTGTTAGTAACTCCTTATTCTCTACATTTTTGCCAAATAACTTAAAAATGTTTTTAAAAATGAAAAGGATCATTGGACCCAGATAACAAATGATGACCAGTTTTTTCTGGTATACTGATGATTAACTGAAGAAATCATACTTCTTCAGAACCAATAAAGGCATTAAAAGTCACCCAAAGATGACTAACTTTACACCAAAGTATTTGAAAGCATAGGTGAAATGTATATTTTACAAAGATACATCATTAATATTGACTCGAAAAGGAATAGAAACTCAGAATAAACCAATAACCATTAGAGATACCAAGCTGATAATCATGAGTATTCTCCCCACAAATGATATCAGACTTACTGAGCCTTCAGAGAATACTTAACTCCTATACTATAAAAACTTTAGTTAAAAAAAGTATCCAATACACGTATAGTATTAACTGATCTCAAACCAGGCCAAGGACAATATAAATGGAAATTATAGATCATTTCACTTAATGGACATTGCTGCTCAATTCAACAGTTGCTCACAAACCAAAAAACAACTAATAGGGTGTATCTCAGGGTTGCAGTGATGGCTCAACATCTAAAAATTTGTTTCTATAATATACCTTATTAATTGCTTAAAGGAAAAAATCTATACTAGTAACTCAGTGGAAAAAGAAAATGCATTGTTTAGGCCTTCCCTGGTAGTCCAATGGTTAAGAATTTGCCTGCCAGCGCAGGGGACACAGGTTCAATCCTTGGTCCAGGAAGTTTCCACATGCCTTGGGGCAGCTAAGCCTGTACACCCACAACTACTGAGACCACACTTAGTCCATGAGCTGCAACTACTAAAGCCCTGCTCTGCAACAAGAGAAGTCATCGAAATGAGAAGCCCACTCACCACAACGAGAGCGCAGCAATTAAGATCCAGCACAGCCCCCCCAAGAAAATTTGTATCAAGTATGAAAGAACAAAAGAGATGACACTGATCTTATTTGCAGATAATGTTACTGTCTGTGTACAACTCCGTGGTTTAGTCAGTAAGTCTTGTCCAACTCTTGGGACCCCATGGACTGTCCTGTCCATGGGATTCTTCAGGCAAGAATACTGGACTGGGTTGCCATACTCCAAGGGAGGCAAATTTTTTGAAACTATTTTTCTGGACCCAAGAACAATATACAATTACAGCATTCCTACAAATCAGAAAATGCAATAATATGCCCCACACTCCATACAGCAAGCTGCCGTCAATCTAGGTTGGAAGAGAAGAAGACCACAGAAGATTACAAAACATTTGGGAAGAATTCCTTTAAAAGCATGACTAAATGGAGAGGTAGATACTCATGCATGGAAGGATACAGTATTGTACATATGTCATTCTCCCTAAATTAATCTATAAATTCACCTCCAGTCGAATCTCAAAATAATTTTGTTGTACCCTGCAAAATGATTCCAGTGTTTAAATGGAAGAGGAAAATGTTGAGGTTCGTCATAAAAATGTTGAAAAATGTAAGCAGGCTTGCTCTACCAGATAAAGAAACTTGTAAAACTAATGACTGATAGGTGTACTCTGAGAGTAAAGAAACCAAAGAAACAAAAATAGAGAACTCAGAAACAAATTCACACACATATAAAAACTTGATACTTGGTTGACACAAATCAGTGGGGGAAAGGACAGATAATAAGTAGTAATAGGTCAATTTTTTGTGATTATGAAAATTACAAACCCCAATTAATGTAGCTGAAACTTGTCTAAGTCAGAAGATAATGAGAAAGCTCGCTGTAAGACTGTCAGAAGTACTTGAGAAATGCAAATATGTTTATAGAGTTGTTTTTTTTTTAAGGTCAGAGAATACATAGCAGTTACCAAAAAACCTAGGTTAAATATACTTTAAGTGTTTACTCAGAAGGACAAAGACTATTCCTATAACATTCTTAGATTTGTATTTAATATTGTTCTCCAAGTATTGTTAACTATCAACATTAGAGTATAGAAAAGAAAACTCTAATTTGTGCATAAAACTTATGTTTATTTACTTAGCATTGTGATAGTAGATTGGATTTGCTCATGAACTTTGTATAATAACCTGCTGGCCATGACCTCGTTTTTATACTTAAATCCAACAATGTATTAAAAGAATTATATACCATGAACAAGTGGGACTTCAGGTGTGCAAGGCTAGGTCAATATTGAAAAATCAATTAAGATAGTCCATCATATCAACAGACTAAAAAAGAAAGAAAAAATTATATTATCAATAAATGTAGGAAAAGAATTTGACAAAATCCAGCACCCGTTTATGATTAAAACTCTCAGCAAACTAGGAACAGACCTTCTTTAACTTGGTAACATCTACAAAAACCTACAGCTAATATCATACTAAATGGTGAGAAACTAAATGCATTTCCACCAAGATCAGGAACAAGGCAAGGATGTCCCCTCTTAGCACTGCTTTTCACATCTTAAGACATCTTTCACATATATAAAGCAGGGGAGGGATAATGATTATAGATTGAGAAGGAAGAAATATTTTCAGATGACATGCGTATCTACATAGAAAATCACCAAAAACAAAACAAAAAACCCGGAAGCAGGATTAAGCAGTTACAGTTATAGCAGTTTCAGTATACAAAGTTAATAGACAAAGTCAATTGCTTTCTTATATGCCAGTGATGAACAATTTAAATTTGAAACTTAAAACCCAATACCAAACAAAAACAATAAAAAAAAAAAACCTTAGGTATAAATCTTAAAACATCCACAACATGTATACAAGGACAACTAATAAACTGGTGAAAGCAATTTTTTAAAAAATAAATGGAAATATTCCATGTACATGGATAGAAGACTCAATATTGTCAACATATCAGTTCCTCCCTACTTGCTTTGTAGATTCAACACAATTTCAATTAAAACTGCAGAAAGTTATTTTATGGATATTGACAAGTTTATTCTAAAGTTTAATTGTAAAGACAGAAGACCCCAAATAGCTGATATAGCATCGGGAAGAACATAGCGGCATGACTGACACAGCCAGCCCTTGACTTACTATAAAGCTTCGGTAACCAAGATGATGTGGTAATGGTGAAGGAATGAGCAGCTAGTCAATGGACAGAAAACAGAGACCAGAAATAGACCCCACAAATATAGTCAATTGATCTTTGACAAAGGATCAAGGCAATTCGATGGAGAAAGGATAGTCTTCAACAAATGGTGTTGGAACGGGACAACTGGGAATCCACATTTAAAAAAAGTGAATCTGGACATAGACCTTACACCTTTCACAAACTAAACTCAAAATGAATAATAAACTAAATGTAAAACACAAACCTATAAAGAAGATACATAGAAAATTTAGGTGATCTTCAGTTTAGCCATGACTTTTTTAGATACATAGCTAAACACATGATCCATAAAAGAAAAAAAAGTTGGACTTCATTAAAACTGAAAATGTCTGCTATCCAAAAGATGTTGAATGAAAAGATAAGCCACAAGTGGGGAGTAAATATTTGCAAAACAATGAAATACTGTTGTTAAAATAATTAAATCCAATGGCAAAAATCCAAAACACTGACGACACCAAATGCTGGCTGGATGTGGAGCAACATGAACTGTCACTGCTAGTGGGAATGCAAGACGGTAGAGCCAAGTTGGAAGACAGTTGGCAATTGAGAAAACTAAACATACCCTTAGCAAACAGTCCAGCAATTCAATGAGTCGAAAACATGTCCACACAAAAACTAGCACACCAATGTTTACAACAGCTTTATTCACAAAGTCCTTCAGTAGGTAAACGGATAAACACACGGGTACATCCACACAATGGATTGTTATTTGGCAATAAAATGAAACTTACCAAGTCACAAAAAGTCATGGAAGGCCCTTGAAAGTATAACAGTGAAAGAAGCCAATCTGAAAAGGCTACATACTATATAATGCCAACATGTGACAGTCTGGAAAAGGCAAAACTAGGGAGACAGTAAAAAGAACAGATGGCCAGGAGTTGGGAGAGGTGGATTAAGTGGAAGGAGGAATGAACATGTGGAGCATGGGATTTTTAGGCCCTTGAAACTATCCTGTTACCCTGAAACTATCCTGTTACTGTAATGGTGGTTACATGTTATACATATGCCCAGACCCATAGAATGGATAACGCAAAGAATCTACTCTGATTTTAGTTAATAATGTGTTAGTAATGGTTCATCAATTGTAATAAATGTACCACTAATGCAAGATTTCAATAATAGAGGAAACTGGAAGTGGGAGGGAGATGAGAGGGTGTGGGGGAACTCTGTATTTCCTGCTCATTTTTCTGTAAACACAAACTCAATAAAATCTGTTGATTTTTAAAGATGTTTTACTCCGGCTTCTGTGTGGAAAACAGACTAGAAGACTGACAGACTGAAATGATTCCCAACAAGCATTTAGTAAACTCCTGAAATAGTAGGGGCTAGAGATGGCCCTGATAGCAGAGCTGGATGGAAATGCACGGTTCCGGGCATAAGAACTGAGATTATTAATCTCACCATTTGTCACTGTGTAATGTGTGTTAGTCGCTCAGTCATGTCCGACTCTTTGTGACTCCACAGACTGTAGCCCGCCAGGCTTCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGATTGCCATTCCCTTCTCCAGAGGAACTTCCCAACCCAGGAATTGAGCCCTGGTCTCCTGCATCACAGGCAGATTCTTTTGTCTCTGTGTAAAGGGAAATGTAATTCTTTTTCTCTAGTTCCTTATGTGTATGATCTGTGTTAAATATTTGTATCAATGTATGCCAATGCCACAAATTGAACTGTCACTATAATCCTTTCTATTTACTTTTAAGTATACATTTATAAAAATTCTTCAATACAAGTCATTTTAAAATAGTAAATAAATTGGTCCTCAACTTTACACATCACCTTCCATTTGGAAAGGTTAGAAAAAAAATTTTTCAATGCCCTGACTCCCTTGCACC EMBV3_19470 AACGACATGCTCGATGGCTAGAGACCCTCAACACTCAACGCGAGAAGCTTATTTGGAACG Control NULL NULL 0 EMBV3_17264 NULL NULL NULL NULL NULL NULL EMBV3_10645 ACGGTGTTCCTGCCTGGTTCCATTTATCAGCTACTTCAGCCAGCATCAGACCTACTGCCT Gene GeneID:521798|DCST2:XM_002686012:397_cdna Constitutive 0 NULL GeneID:521798 3 GENE DCST2 NULL DC-STAMP domain containing 2 EMBV3_16863 ATCCTGCTGTCCTACTGCTCTATCCTGTGCAACTACAAGGCCATCGAAATGCCCTCGCAT Gene GeneID:100337299|LOC100337299:XM_002690291:17_cdna Constitutive 0 NULL GeneID:100337299 9 GENE LOC100337299 NULL androgen-induced 1-like EMBV3_28905 TCCTCCGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGAGGTCGGGGGCCTGGTTCTAC Variant GeneID:617294|RPH3AL:NM_001035494:166_cdna 388^474 1 EMBV3_39099 GeneID:617294 19 GENE RPH3AL MGC127240 rabphilin 3A-like (without C2 domains) EMBV3_25867 CTTTCAAAATCATATCATTCCTTAGAGTTTAGGGACCAAAGGACTATTGCTTTTTTAAGA Gene GeneID:539205|BRUNOL6:XM_002690490:438_cdna Constitutive 2 NULL GeneID:539205 10 GENE BRUNOL6 BRUNOL6 bruno-like 6, RNA binding protein (Drosophila) EMBV3_11217 TGGCTTGACTACAGGCTTAAAATTCCCAGCCCTTGTTTTATTCGTTGTATTGATTTTTGC Gene GeneID:404160|SLCO1B3:NM_205804:16_cdna Constitutive 0 NULL GeneID:404160 5 GENE SLCO1B3 SLCO1B4 Slc21a10 solute carrier organic anion transporter family, member 1B3 EMBV3_37559 AACTCCCGGGTGGTTGAGGACCTGGGTTTCCGCCTAGAGAAGCGAATCTATGATCTGAAA Gene GeneID:521560|WDR65:XM_002686519:699_cdna Constitutive 0 NULL GeneID:521560 3 GENE WDR65 NULL WD repeat domain 65 EMBV3_13058 GAATGCCGACCAGTACAAATATGGCAAGAACCGGGTGGAAGCAGATGCCAAGCGGCTGCA Gene GeneID:534032|AFAP1:XM_002707827:7_cdna Constitutive 0 NULL GeneID:534032 6 GENE AFAP1 NULL actin filament associated protein 1 EMBV3_35384 CCACCACCTTCAAGGGCGTTGACCCTAACAGCAGGGAAGACGCTGAGTCATCTGGACCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25466 TTCACCTACGGCGAAGTCCAGAGGATGCAGGAAAAGGAGAGGTACAAGGGGCAAAAGAAA Gene GeneID:280860|MLN:NM_173938:38_cdna Constitutive 0 NULL GeneID:280860 23 GENE MLN NULL motilin EMBV3_13768 GCCAAGCCCGCCTTCTTCGGTCTCCTGCTGGGCCATCTCCCAGGCCCAGAGTTGGTGTCT Variant GeneID:515925|FADS3:NM_001083691:94_cdna 510^601 1 EMBV3_13215 GeneID:515925 29 GENE FADS3 MGC155279 fatty acid desaturase 3 EMBV3_26609 TTCCATGTTGTTCCTGCCTTCTTTCCTGCAACAACGGACACTTCTGGATGTTTCACAGCC Gene GeneID:616965|FAM72A:NM_001101263:109_cdna UTR3_Alt 1 NULL GeneID:616965 16 GENE FAM72A NULL Protein FAM72A EMBV3_30181 GCTGATCCCCTGGCCGCTGGAGGAGCAGTTGTAAACAGATTCAGGTGTTATCGGGCCACC Variant GeneID:508388|WSB2:NM_001075357:90_cdna 241^617 3 EMBV3_27099 GeneID:508388 17 GENE WSB2 NULL WD repeat and SOCS box-containing 2 EMBV3_31731 CTCCAGCTGCATAAGCTTATTGTCTAGCAAGGCTGCGAGGACCTATTATTGGACCACTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11047 CCAACAGTGTCTTCCAAAGAGGACTAAAGCGCCTATCAGGGGCCATGTGTACTTCTTGTG Gene GeneID:519193|GPR21:NM_001098047:29_cdna Constitutive 0 NULL GeneID:519193 11 GENE GPR21 NULL G protein-coupled receptor 21 EMBV3_07912 CCTCGCGACTCCCCACTGCCCCGTGGCCAGGGGGCGGGCACTGATGAAGCCTGCCTGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09474 CTGGTCACCATGAAGAAGCTGGACAGTAAGGTCCACCTCCCTTTTGCAGTGGTCGGCAGC Variant GeneID:535746|SEPT11:NM_001082447:89_cdna 685^846 1 EMBV3_42253 GeneID:535746 6 GENE SEPT11 MGC148776 septin 11 EMBV3_00331 TTTTCAAAGCCCTTTTACGACTCTTGGCATTTTCCTCACCCTGGCCTGTGGGGCAGTTGG Gene GeneID:507196|SHC1:NM_001075305:103_cdna Constitutive 0 NULL GeneID:507196 3 GENE SHC1 p66shc SHC (Src homology 2 domain containing) transforming protein 1 EMBV3_16741 AGAATGGCCCTGTCTCCCCATCTTTTGACCAAGCCCACAAAACCTGCTGTCCAGACTTGA Gene GeneID:506904|C10H14ORF93:NM_001038049:80_cdna Constitutive 0 NULL GeneID:506904 10 GENE C10H14ORF93 MGC134083 chromosome 14 open reading frame 93 ortholog EMBV3_18432 TCAGCCAGCAAATCACCATCATCTTTGCGTTGCTAAGTGTCATATAAGTTCCCGCAGGTG Gene BVT0102_208582 + 1 EMBV3_18171 GK000013.2:39902059-39903413 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10951 AGGCTAGCATTCTGCCACTAGGACAGGCTTAGCATTGAGGACACTCCAACCCCAAATTCC Gene GeneID:532416|PATZ1:XM_002694628:95_cdna Constitutive 0 NULL GeneID:532416 17 GENE PATZ1 NULL POZ (BTB) and AT hook containing zinc finger 1 EMBV3_30452 ACAGAGCTTTTGCTAGGTGGGGACAGAAGAGCTGAAATAGCAGCCAACAACTATAACAAC Gene BVV0101_044243 + 0 NULL GK000006.2:73507192-73511905 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203579 TCONS_00203577 TCONS_00203584 TCONS_00203582 TCONS_00203580 TCONS_00203576 1 XLOC_124206 Coding TCONS_00203580 XLOC_124206 Coding Coding PAICS 6:73487664-73509812 j TSS152457 4196 1 TCONS_00203580_3 425 0.0617254528122021 10 0.810990201833205 0.00018722846709372 0.000231068126383153 0.000594287740259231 0.00061762010780605 6.62094698548016e-297 0.000160859584318209 0.000399613268262223 0.000755589234943313 0.000610063961710926 0.000100051891170351 4.6030471293001e-05 4.85690016818134e-16 1.3465271046725e-19 2.52298644693409e-08 0.000950274240376801 0.0022982088820955 0.00130130546322303 0.000250066274035267 0.000276710296533318 0.000120326851246262 4.95881946873458e-21 0.000700882262313602 0.000276224765323683 0.0028471839771161 0.0012536128786815 0.000332759971162206 0.00118318724361244 2.41649738266636e-16 3.51442846663921e-17 1.94138551935079e-13 XM_005207947.1 PAICS PREDICTED: Bos taurus phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS), 0.0 7562 100.00 0.99904671115348 NM_001079524.1 PAICS Homo sapiens phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS), 0.0 1952 89.26 0.354146806482364 TCONS_00203580_3 sp|P22234|PUR6_HUMAN PUR6_HUMAN Multifunctional protein ADE2; 0.0 844 94.59 0.997647058823529 2 coding 0 0 0 0 -0.0301828429843439 0.834227456324493 0.0569579773198619 0.296180335514827 ACGGCCCTGTGGGGGTGGAGCTAGCCCTCTCCCTGAGCCCTGTGGGAGGATAATTTTTCCGCATGTGCATCTCTCCGTTATTTTCTAGCACCCAAGACGGAGAGTCCTGCGTCTCTTCGCAGCGCGGCCGAAGGCCTCAGACCTCTCCGGACAATGGCGGCAGTCGAAGTACTGAAGATTGGTAAAAAACTCTATGAGGGTAAAACAAAAGAAGTCTATGAATTGTTGGATAGTCCAGGAAAAGTCCTCCTGCAATCCAAGGACCAAATAACAGCAGGAAATGCAGCCAGAAAGAATCACCTTGAAGGAAAAGCTGCAATCTCAAATAAAATTACCAGCTGTATTTTTCAGTTGTTACAGGAAGCAGGTATCAAAACTGCTTTCACCAAAAAATGTGGGGAGACAGCTTTCATTGCACCTAAGTGTGAAATGATTCCAATTGAATGGGTTTGTAGAAGAATAGCAACTGGTTCTTTTCTCAAAAGAAATCCTGGTGTTAAGGAAGGATATAAGTTCTACCCACCTAAAGTGGAGATGTTTTTTAAGGATGATGCCAATAATGATCCACAGTGGTCTGAGGAACAGCTAATTGCTGCAAATTTTTGCTTTGCTGGACTTGTTATAGGACAAACTGAAGTGGATATCATGAGTCATGCTACGCAGGCTATTTTTGAAATACTGGAGAAATCCTGGTTGCCCCAGAACTGTACACTAGTTGATATGAAGATTGAATTTGGTGTTGATGTAATCACCAGAGAAATTGTTCTTGCTGATGTTATTGATAATGATTCCTGGAGACTCTGGCCATCAGGAGACCGAAGCCAGCAAAAAGACAAACAGTCGTATCGTGATCTCAAGGAAGTAACTCCTGAAGGGCTACAGATGGTGAAGAAAAATTTTGAGTGGGTTGCAGAAAGAGTAGAGTTGCTTCTGAAACCAGAAAGTCAGTGCAGGGTTATAGTATTGATGGGCTCAACCTCCGATCTTAATCACTGTGAAAAAATTAAGAAGGCTTGTGGAAATTTTGGCATTCCATGCGAACTTAGGGTCACCTCTGCCCATAAAGGACCAGATGAAACTCTGAGGATTAAAGCTGAGTATGAAGGAGATGGAATTCCTACTGTATTTGTGGCAGTGGCAGGCAGAAGCAATGGTTTAGGACCGGTGTTGTCTGGTAACACTGCATATCCAGTTATCAGCTGTCCTCCTCTCACTCCAGACTGGGGAGCTCAGGATGTGTGGTCTTCTCTTCGATTACCCAGTGGTCTTGGCTGTTCAACCATCCTTTCTCCAGAAGGATCAGCTCAGTTTGCTGCTCAGATATTTGGATTAAATAACCATTTGATCTGGGCCCGACTGCGAGCAAGTGTATTAAACACATGGATTTCCTTGAAGCAGGCTGACAAGAAAATTAGAGAGGCCAGTTTATAAGAAAGAACATCACTGCATTTTTTTAAGGAGGAAAACTATAATATTCTGGTATAGCTGCCGCCCAAAAAAAATCAAGATGAAAAGATTTTAAATCATTGAGAGAAAAATAAAATTTGTAAGTGAATAAATGCTTTTCTCAATTCATGGATTAGTAAAATGTGTACATATTTATTAATGTCTCTTTGTAAGGAGTGAAATTACTATACATTCAAAATTAATCTCTTACCCACATATGATCATTATTAGCTAGACAGTATAATTAATTATATTTACTAAATGCTAATAATGTCCTATTACAGAGCTCTAAAATTATTACTTGACTTTCTACATCTCAGCCCATAAGTTTTAGAAATGTAAAATGGTTGTATTTTAGGGTGGTTAAGCACAATATAGGCCTTTTTCACAGTATGATCTTAACAAAATTCTAAGGGCATGGTTTTTTATTTGCAGTCACTATGTCAGAAAATGATGTTGTATTTAGCTATAGATAGAGATGAAGTTTGGGTTTGACATTGCCTTTTTTTGACAAAAGCCAAGATTGTTGCTAGGGCTAAGAAAGACAAGATGAAGGGGCACTGAGGACGCCATATAGAGAACTTCTGAGAACTTAACTGTTAAGGCAGTTTCCAGTGGGAAAAAAAGTAATTACCTTTGCCATTGCAAATGAAAGATTTAGTAAATCTTACTTGGCTCTGTAGGTCATAAAATTCTTTTCATTCTAATATATATTATAGTCAGACTAACAATTCCCAGCTTACCATCATTTTCAGAAATTGGAATCTCCCAGTTAATGACCATAACTAGTTCTTTCTTGTTAATAGTATTAAGCCTGGGCAGTATACCCAGCAAAATGTACCTCTAAAGGAGCAGTTATTACTGAGAAATATTACAGTTCATCATGAGTCTATAAACCATATTTGGAAGTCAGTATTACATTATGCAGCCTAGGAATTTTACAGATCGTTTAAAGTTTTATCCAAGTGTCCACACAGCCCTTAAGCTTGCATGTAAAAATTTATAAATGTTCACTTTGAAAAGAGGGCAGTTTTTACCAATTAATCTGTGTCCCTCCCTCCCTTCCCACCCACACCATCCCCCAACCCCCAAGGCTGAGTCTCCGCTACAGATGAAATCCTGAAAACTTTTGCCACTGGCCTATACTGTCTGTGCTTTTTCACCTTCCTGTCAACTGTTAACAAGCTAGCATCTTATCACTTTAACTTGTTCTCTTTAGGGTATAATTGACCTGATTATTCCTTTTCTTGGGCTAGACACCAAATACTCTTTCACTTAATTATTGGTATTTCCTGTTCACTCCATTGTTTACAAATAGTGCTAGAATAATCATCTTTATAGTGAATGTCTATGGACTTGTATTTTCAGCTATTTCCCTCTGAATGCTCCAAACTTAACCCATCTTCCAAGCCTATAGCTGGCTATACTCACTGTCCCAAATCAGAAGCTTGATTTTATCCTTGATAGTTTTCTCTGGGAGAAGGAAATGGCAACCCACTCCAGTGTTTTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGATGGGCTGCCGTCTGTGGGGTCGCACAGAGTCAGACATGGCTGAAGCGACTTAGCAGCAGCAGCAGTTTTCTCTGACCTTTTGATTTTTAACTCATCACCAAGTCTTGAATTTACCATTTATCCATCCTCAAAAAATATAAAAATCTCAAGCAAGGGTCAAATTCTGTTACTAGCCTGGTCTAGATCTTCATTCTCAACCTGACCTTTTCAAAGACTGTCCAAGGACTTAGAACATAAACTCTTAAATAAGTTTCTTTTGCAACATAGACTCCTTTGAAAATAAGAACGCTGCTGATCCTCTGTCTAGAAAATTGCACAGAATTTCTCAGTATGTTCCATTGGTTCCTGGGTTCCCTTGAAATCTGTCCATAGTCTTGTAGGTTAAGAATCACTGATGTAACCTATCAAGGGAACTTGCTTTTCTCATAGTTTTCAGACTTAGAATGTCCTCGTGTCATTAAAATCGTGTTACTAGGGCTTCATCTTCACTGTCTCCATTAAACCTTCCCTAATAAACCTTCCTCTAGCAACAATGACTACAAGTACTTTCTCTGTTGGAGTGTAAGTTCCCAAAGAGGAGAAAATATAGTTTTACAGTTTGTTTATCTTATGCGCTGATGTGCTATGCCTAGCTGTCTGCTAGAAATGGGGGAAATTGTAAAAATCATGTCCTGCTTAGTTTTCTATCTTGTTAGATCACGTTAGATCACAAGAACAATTAAAAAGATTTGATCTTAACATCTTTGAACTTGGGTTTCTTAAGGTCTCTAAATACAGTTGTTATAGTTGTTGGCTGCTATTTCAGCTCTTCTGTCCCCACCTAGCAAAAGCTCTGTTTTTGTGCAGTACATAAAAATGTCAAACATTGAGACTGGTGGGTAGGACTGACCTTTATTAATGGTCATAATAATTTTCACTATTAGTTTCCTAATAGAGTACATATATCCTCAATAGTATAGTTCATCAGTGCTAGAGTAAATACTTGTTTAAAAGTATTTTAACTGTGTTCTAAAAAGTAACTTACACAAACCTACCTGGTTTGCCACCTTTGGATGTTTATACTTTGTGGGCTTGTAGTTAAAAAGAGGAAGAAAAATTGTGTCCAAATAACTCACTAGTTTATATCATAAAGCCACACTTAAAATTGCTTTGCTTTAATGCCTTCTGAAATGTAAACAGTGCAGCCAAATAAAAGACAAAGATAAGCT EMBV3_06761 GCAGAGAGACCTACACATTCCCCATGTGACGAACTCTGTTCAAAGGCCCTTCCAAGATTC Gene BVT0102_011555 + 0 NULL GK000026.2:44923601-45525041 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151173 1 XLOC_092047 NonCoding TCONS_00151173 XLOC_092047 NonCoding NonCoding - 26:45048849-45053733 - TSS113067 4681 1 TCONS_00151173_1 148 3 0.0419823878763056 0.0016887224643182 0.00149406423818476 0.00123755655777218 0.000839108322363504 0.00124774309928006 0.000658709885152706 0.000553146674342854 0.000401812225746243 0.000672540224377599 0.000316431736185083 0.000200016442923047 1.98606926908534e-05 0.000101751953307843 0.000188923232722662 0.000390944749764687 0.00223434918076058 0.000230537936266512 2.14406243526925e-05 0.00100953680820503 0.00132890189777772 0.000416999097486885 0.000835440744798698 5.68355628454278e-05 0.000125349724888286 0.00104349057072975 0.000815774695357605 0.000680918395659302 0.000162104457424848 8.91897861075589e-05 2.56878922037325e-05 XM_005193103.1 LOC101909891 PREDICTED: Bos taurus basic proline-rich protein-like (LOC101909891), mRNA. 5e-19 102 98.31 0.0123905148472549 0 noncoding 0 0 0 0 -0.0284275982211186 0.855409995182122 -0.040378869345777 0.506621986996233 CCTCGCATAAAATAGGAATTGCTCTATTTACCTAGCCCGCAGGAGCGTCGTGAAGATTAATGACTGTGAAATGTTCTTAAGATCAAAAACATTCTGAAATTTTACTTGTAGGCACTTATATGTCCATATTGCTATCTGCACGGCAAAATATACTCTTTATTGATTGCCCCCCTGGAGTGACTTCTAGCCCACGACCACAAAGCGCTGAGGAAATGGAATCAGGTACATCACTGTGTCCTTCCTGTACCTGGAATACGGGCAGAAAACGTGGCATCCACACTGGGCCTCTGGCTTCATCCAGGCCCCAAGGGGCAGCTGGAGGAATCAGCCAGCATTGCAGCCCACACAGTTCACTGTCTGAAGAGAAGCTGGAAAGAAACTTTCCAAAATGTTTATCACACCACCAGGAAGAAATCACAGCATTCCTACCCCTCAGTTCCTTAGCAGCTGCCCCCAAGCATGGGCTGCCCTTGAGGTGTGTGTGTGTGGGGGGGGGGTCTCTGCTGTTTGGAAAACCTCTGCCCCACGCAGGGGCCCAGTGGTCAGTCAAGTTCAGCCAGTGCTAGGAGCCCACGCAGCCCATCTGGCCTGGAGCTCCCACAGCAAGGCCTCCCTGGTGTCACTAGCTCTCTGTCCCTCCCAGCAAAGCATGCCCGTGTGACCAGGCGAGGCCGCTCCACTTCAGTCCCCTCGACCATCCCTGGAAGGGGCTTTCTGAGCTCCGAGCCCACCCCAGTCCCCTTACCCCCTCCCCCATCCCACACCCCCTTGCTCCCTGCTGGCCCAGGCTGCCCTCCAGGTGGGCAGACCCGGAAGGTGCAACACCCTACGGGCTCCTCACCATCCAAATGGGTGTGAGGCCCACCTGGGGCTGAACAAGCAGACTTTGTTTGCACTTCTGGACCGACCGCTCTAAACACATCCATTAGCCAAAGAATCAAGTCCCAGCCAGGGTTCCTTCAGCAGGAAAGGTGCACACGGTAAAGGTGGCCTCTACCCACGACAGCCAAGGAAATTCACCTGAAGGTCCTCCCGCCCCCTACCCCCATCCCTCCACACAGACTCAGACACCTGGGGCCGCTACAAACAACACAATCACTTCCAGGTTGGATGCAGGGCATTTTCACCCATCAAGCTTTATAAATTGCCATGCTTGGGGAATCAGGCCAGAGGAGCTGACCTCTATGATCTCGGTCTCCTGTTCTTTCCAAAGAAACTTCCAGGGATTCCATGACTCCATAATGAAGTTTTTGTTCGTCCTGTGCTGAAGTCCAGATTTCAGGCATGGCTGGAGCAGAGCAGTGAGTTTAAAACCCTGTGGCCAGCCTGGGCACTGCAGAGAGACCTACACATTCCCCATGTGACGAACTCTGTTCAAAGGCCCTTCCAAGATTCTGCCACAACCTGGGCTGGGATGAGACACAGAAAAGTGGCCACGACTTCGAACCAATCTTCAAGCCAATTAATAGCAACTCAAGTCATAACTAAGGATTTACTTTAATGCAAAAAGCACCTTTCTGAGCACTTTTGAGAGGGAGGGAAAGTAACAATGTAAAGTTTTGTTGTTGTTGGGTTTTTTACAAGCCCAAAGGATTTTAAGAATCACAGGGTTCTGTTGGAAAGCACCGCCTCCCCCCATCCCAAGACATGTTTGGACTCTCAGTGAACAACACCCAAAGGCAGGCTGCCCACCAAGTTCAAGCAACAACAGCTATTCGGGATTAACATCCCCTAAATACCATCCGATGGTCCTGGGGATAATGAAGGCTCTATTACTACCCAGAAGCAAAGTCACAATTCTCCGTGAAAGGAAAAGCATCCCTTACATGAATCCATGAGTAAGAACGCAGGTGTCTTATCACTGTTGTTGTGACTATTAAGCCCAACCTTAAGGAACCATCTGTTACATTTCGTTACAGAAACAGTTAAAGCAGACCATTTCTAAAACATTCACTCAAGGAAGAACCGGGCTAGATACAGGTGGAAAGTCAACTGGCCCCCAAAGTTGTAACCAAAGCTCCTCACCCCAATCAGAACGGGCATCAATCAGGCCTCAACAAGGAGCCAGGGCCACACTGCCCCCAGTTCTGGGAGGGGCGAAAAAGGTCAACAGGAGTGCCTGCCCCTGTAGCAAGAGTTTGGGCCCCACTTGGGAACCTCAGCTCCCATGTGCAAGCAGGAAGCTTGGTGAATGGAGGAAGAAGATGCAACTCAGAGGAACGTTTCCAGAAATAGCAGCAGCTGTGCAGCAAAATACAAAAATCCAACAAATACTCATTTTCACTGCACTTCCCCTAACACCACAACAAACCCAAAACGACTTTAATGTGAGGGAAATAATAAAAATAAACACCACTGCTTCCTGTGACTTCAGATGCCTTGATTTCTGAATCTTGTCTCCAAAAAAGTAGATCACTGAGAAGAGAAAGCACACAAAGTTCCCTGGCAGTCCAGAAAAGACCACCTTCTAAGAAAAAATCTGGAAAGGGAGCAGGCCAGCGGCTGGGCAAAGTCGGATGACTGCGAGCCTGGTTCCCACCCGTGTGCAGCTCCTGAAGTTTGTGTGTTCCCGAGCAGTTAGAGAATGAAGCTGCCCCTTGGCTCCCACTGTCAACATTCCGCACAAACAATGGCCTGGCCGCTCACCATTGTACATTCTGTATTCATCTGCGAATCCCGGTTTTTAGCACAATGTGCAAAGCCCTTCTTTTCACTGGTGCAGTCCTGAAGGCCCAAGTGTAGCTGTAATTTCGGCTGGAAACACTAATAATGATGCTAAGAGCAAACTACACATGAAGCTGGGACGTTAATTTGTTCAGATTATTAGAGTCACACTGATGGCACTTGGATACTACTGTCCATTAAATCATGATCAAAAGAAAGGCTGAACACCTTAAAGATGGTTCTGAAGTTTTTAGCAATTATTAAGTATAATTTTCCAAACCCAGACATAGGTATGTTTTAAAAAAAAAGAAAAAAATCCCTTTCATGAGTCTTTGATACATATTCCATCAAACACACACTTGAACAAAAATTAACTTCAAAAGGTTAGGTGAGGGTGGTAGGGTGGGGAGTTTTATATTTTTCCTTCTTTCCCAGGACGCTGTAACTTTAACTGTAGCAGCGTAAATTAGGACATGCTTACCAGCTGGAAAGGAGAAAACTGATACTGCCCAGGCAGTATAGCCTCTGAGAGCATATCCATTCCAGCGTTTTCCTGCGCCTGCTAAAGTCTGCAGGAGGGGAAGTCCACACAAGCATTCCTTAGCTAGCGAATCGCACAGGAACCTTCTTGGAGAACAAGGCGCAGCGTTTCAATACGCGGTGTTAAGTATGAGTAGTCTATTCGAAGGGTCAAGCAAACTGCACTCCCGTTTTCTTAATTACTACGAAGATGCGTTCCACCGCTGTAAGTGAACTATCAGCCAGGCGGTGGAAACACTACCGGAATTGTGCTCTGAAGAACAGATAAATTTCCTTTCCCAAACATGTCCTATATGAACATATATTTGTGGCCAGTATCAGGAACACGAGACACTTGGACTGCTACTTTCGCCGATAGATCATTCACAGAGGGACCCAGGCTTGTACTCACATACCTTATGGTGACAGCCCTTCTCTATCGAAATGACAGTGGTAAAAAATGACAGCTGGGGTGGCCGTTCTATGGTTGCTGTAAACGCTTTACATTTTTTCCATTTAGGGAAAAGTGTTAAGTGCAAAGGGGATAACTTTGCCTTCAAAAATGATTCATAATGGAGAGAACGGTTGGCAAATGGCTTTGGGGCGTTAGACCCCAGCGGGGCCACCCTTTTGGTTTTGAACCTCAAGGATTTCCAATGGTGTGAGCCAACCTGAGCTCCCTTGGCCAGAATATTTTAACAGCAATAAAATTCTTTCCCACTCCTGCACTGTGCTTAACGCAGTATGTTTAACTATGTACACACTCATCCTTTACCTGGTCGCTGGCTACTCAGAGCACTAAAAAAGTTCCAGGTTAACTTTGCAGTTTTGTTTGTTGCTGTTGCTGTTTGTTGCCATTTCGTCTCTCATTAAAACACTTTTCAGACTTATGAATAGGATTTCCTTCTGGAGTTTTACAAGTCAAGAGTAAACGTATTGATTATTCCCTGAAAGGGTAACTGATGGCTAGTTAATCATTATACAGATAGCAAGTTTTCCTGTTTCATCTTGTGTACACGACCAGATTAACAATGCCAGGGAAAGCAAACTCGACTTTGCAGGAACAGGTGTGCCCTGAGTCTTAAAAGGCCAAAATATCTCACAAAGTATGTCACTGGTGTATTTTTACAATGCTAGTAGTATTTGTTTTTAAGTAGCCAAACTTTTAAACTTTTTTAACTTTAAAGACACACACTTTGCAAATATTTCTTCACCTAGTCAATGACTAAGTGCCAGACATAAGTTGCAATTCCAGCCCCCAAAAGAAACCCTCTAAAGGACAGAGGTTTTTGTTGGGTTTTTTTTTTTTTGCTGTTGTTGCTTGAATCACAGATAAGAGATGGTAATTCGCCTTGCCCCTCACCCAGGAGAACACCCAGTTAAGGGACAGTTTCAAAGATCCCAACTGAAATCTTAAATAGTAGGGCTCTGAGCTCAAATCCACAGAGCTACAGAGAGCACCCTCCACCCAGCTGTTATTAATGCACAATCAGAAAAG TCONS_00152496 r 5' 300 TCONS_00152496 r 5' 300 EMBV3_29987 GGTGGTTTTGGACCAGACAGGCGTGTCTAAGAGCCGTGTGAAGCCAGTGGAATACAGTCA Variant GeneID:532582|TRNAU1AP:NM_001075967:209_cdna 485^604 1 EMBV3_39160 GeneID:532582 2 GENE TRNAU1AP MGC140234 TRSPAP1 tRNA selenocysteine 1 associated protein 1 EMBV3_33212 GATTTGGTTTTGTTGGAAGCCCCCACCTCCCCGTTTCCTGGGGCGCGAATTTCCGTGCTT Gene GeneID:510360|BMP1:XM_002689771:43_cdna Constitutive 0 NULL GeneID:510360 8 GENE BMP1 NULL bone morphogenetic protein 1 EMBV3_29779 CCCAAAGTTCCTTGGTTCCAGCTCTGACGGATTTTGTTCGGTCTGTGCACCCTTATGAAG Gene GeneID:508956|CUTA:NM_001075379:92_cdna Constitutive 1 NULL GeneID:508956 23 GENE CUTA MGC140443 cutA divalent cation tolerance homolog (E. coli) EMBV3_39621 GAACACATCCAACAGCTGCAGCACCAGGGCATCGAATACGACGTCATCACCCTGAGCGAT Gene GeneID:535476|ZNF335:XM_002692484:572_cdna Constitutive 0 NULL GeneID:535476 13 GENE ZNF335 NULL zinc finger protein 335 EMBV3_42925 CCTTACCTTGTGAAGGCTGCTCTCTTCTAGAGATTTCCAGGGTCTTCATGGAAGGGCAGA Gene GeneID:525059|GSS:NM_001015630:1153_cdna Constitutive 2 NULL GeneID:525059 13 GENE GSS MGC134298 PRNP glutathione synthetase EMBV3_01183 CAATCACACAGAACTGTTGGGAAGCCTCAAAGCGGTAAATCAAGCCATTCAAAGAGCAGG Gene GeneID:533611|BBS2:NM_001038160:351_cdna Constitutive 0 NULL GeneID:533611 18 GENE BBS2 MGC134372 Bardet-Biedl syndrome 2 EMBV3_11909 CAGAGCCACTGGTTTCTGTCTTTGCACCCCTTGGGGTAAAATGGGGGTCACACACTAGTG Gene BVT0102_020363 + 0 NULL GK000019.2:50828336-50848868 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094321 TCONS_00097618 TCONS_00094318 TCONS_00094320 2 XLOC_057413 XLOC_058286 NonCoding TCONS_00097618 XLOC_058286 NonCoding NonCoding - 19:50837952-50838480 - TSS72285 528 1 TCONS_00097618_1 35 1 0 0.00129532310044472 0.00063597344626408 0.000329172035647998 0.00145230534709951 0.00112379415196725 0.000174214448536776 0.000102609178231853 0.000260643107716637 0.000311724070056082 0 0 0 4.52540343347892e-17 2.67271754759784e-05 0 0 0 0 0.00246741931974442 0.00258304566752018 0.00167698788183776 0 0 0 0.000638009106668717 0.00155023723687443 0.00062821143514972 0 0 0 0 noncoding CAGATTTATCACGGCATTCAAAATTTAATGTTCCTATAGAAACATGTGCCTCTAAGGAAATTGGAGCATGATCATGGAGGCCCCCACTAGTGTGTGACCCCCATTTTACCCCAAGGGGTGCAGAGACAGAAACCAGTGGCTCTGTACATTACTTTTCAGTAAGCTCATGAACCTTATCCATTTTTATGGCTGACTTTGAGCCTTACTGGCATAAGTTGGTCAGAGAATTGTTATGTGTCCTTGTCTTCGTGGCTTCTTGTTTCTTTTAGAAATACAACTCTAATTTTATCAGTAAAATCAGTTAAAAGAAAGAAAGAAAGAAAATCAACTGTCAGGCAAACTTTACAGAGCACATATATTCTCCACACCAATGACGGTGTCTCACATCCTCTGGGCCTTGCTGGGTGCCTGCTCCCTGTGGAAGCAGAGATCTTCCTTTTCATCAACAGGCAGCATCCCTCTGAAGAGCTCTCTGTAGTGAACTCATGCAAGAAAGTATTAAACCGTTCATCTTCTTTATTGCCTAGG TCONS_00097615 s 5' 9618 TCONS_00097615 s 5' 10145 EMBV3_04965 AAGAAACTTGTTCTGGAGACAGCCCTACACAAGACTTTCCTGGAGGACCAAGCTCAGTGG Gene GeneID:100140873|ICAM2:XM_002696097:156_cdna Constitutive 0 NULL GeneID:100140873 19 GENE ICAM2 NULL intercellular adhesion molecule 2 EMBV3_29200 TGGCGCTGTTTCGTGATTTCCCCACGTTGGTTCTTACTCTTTTGTATGCTGCCTCCACTG Gene GeneID:789538|LOC789538:XM_002694103:394_cdna Constitutive 0 NULL GeneID:789538 16 GENE LOC789538 NULL similar to KIAA1747 protein EMBV3_00843 CAAGGAAAGTTAAGTCTCTGAAATACTCCTGGACAAGGGGAGCCGTGCACCAGTGTCTGC Gene GeneID:537211|MGC159911:NM_001102197:70_cdna UTR3_Alt 2 NULL GeneID:537211 27 GENE MGC159911 NULL UPF0636 protein C4orf41 homolog EMBV3_19074 TCAATAACACAGCTGATAATTTAAAAACCATTTTAGCTTTCGAGTCACAAGGCAATTTCC Gene GeneID:517987|NEBL:XM_002692087:274_cdna Constitutive 0 NULL GeneID:517987 13 GENE NEBL NULL nebulette EMBV3_19104 GGGCGAGAGGTTGGGCATCAAGCCCGAGAGCCCTGGCACAAAAACTGTTTCCGATGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31505 TTCAGACTGAGTTGATTTATGATTGGCTGGTTTGATCTCCTTGCAGTCCAAGGGACTCTC Gene BVV0101_029260 - 1 EMBV3_23324 GK000012.2:38344526-38816157 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32908 CGAACCTTGCTCCTGATGTGGACTTGACCCCTGTCAACGAACCCAAGAAGAAGAAATACG Variant GeneID:282319|PPP1R8:NM_174582:33_cdna 923^985 3 EMBV3_31375 GeneID:282319 2 GENE PPP1R8 NULL protein phosphatase 1, regulatory (inhibitor) subunit 8 EMBV3_32780 AGGCCCTGACAACTTGATCTAATGGTGGCCGTTCTCTAGCTCTCTCAGGTACTATGGTCT Gene BVT0102_127029 - 0 NULL GK000029.2:29979599-29986078 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03770 TCAAACACTAGCGTGATGTTGCAGGTGCCAGATAGCATCGAGAACCATTGTAGCAGGAAC Gene GeneID:100137823|LOC100137823:XR_083629:311_cdna Constitutive 0 NULL GeneID:100137823 3 PSEUDO LOC100137823 NULL similar to Uncharacterized protein C2orf33 homolog EMBV3_29044 TCCACGTCTGGTCAGGAGAAGGGAGAAAGCATTCGGGGAGAGAAAAAGGGCTGTCAAAAG Gene GeneID:100139125|MCF2L2:XM_002684886:108_cdna Constitutive 0 NULL GeneID:100139125 1 GENE MCF2L2 NULL MCF.2 cell line derived transforming sequence-like 2 EMBV3_38675 AACGCCTCTTTAGGGTTTATGCTCACATTTATCATCAGCATTTCGACCCTGTGATCCAGC Gene GeneID:515407|MOBKL1A:XM_002688343:121_cdna Constitutive 0 NULL GeneID:515407 6 GENE MOBKL1A NULL MOB1, Mps One Binder kinase activator-like 1A (yeast) EMBV3_12743 CAACCTGGATGATTTCAATGTGACCGAGTTCTACCAGAAGCACCAGCAGTCCCGGGTACA Gene GeneID:540263|MARCH10:XM_002696090:135_cdna Constitutive 0 NULL GeneID:540263 19 GENE MARCH10 NULL membrane-associated ring finger (C3HC4) 10 EMBV3_43466 CAGCTCATCTCCTTCTCACTGACTCCCTCTGCCAGGCCGCAGAACACATTTTGGATAACA Gene GeneID:613997|MGC139355:NM_001076304:138_cdna Constitutive 0 NULL GeneID:613997 21 GENE MGC139355 NULL hypothetical protein LOC613997 EMBV3_10110 TTCTACCTTCTGGATCTCAGTTTCCACATCTGTAAGGCAAGAGGGTTGACCAGATGGCCC Gene GeneID:508482|CPNE5:XM_002697207:96_cdna Constitutive 1 NULL GeneID:508482 23 GENE CPNE5 NULL copine V EMBV3_09454 TTCATAAAATAACCTCTTGAAATTATATTTTTCCAAAATGCTCAGATATGTTCAATCTTT Gene GeneID:508297|ANKRD43:XM_002689150:152_cdna Constitutive 1 NULL GeneID:508297 7 GENE ANKRD43 NULL ankyrin repeat domain 43 EMBV3_10613 CTGTTTGTGTTCTTTCGGATTATTCAACTATCAAAAGAAACATTCTTCCATTAAGTTGCC Gene GeneID:338071|SSB:NM_176665:199_cdna Constitutive 2 NULL GeneID:338071 2 GENE SSB NULL Sjogren syndrome antigen B (autoantigen La) EMBV3_30515 CACTGACATCGGAACAGAAGGCTAGTGGGGACTTCCCTGGAGGTTCAATGGTTAAGAATC Gene BVT0102_253049 + 1 EMBV3_22353 GK000019.2:3675431-3876961 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02033 ATGTCCCAGGGTGATGTCCTCCGTAGACGACAGACCACCGAAGTGGCTATTGAAGTATCT Gene GeneID:508385|SLC30A10:XM_002693976:212_cdna Constitutive 0 NULL GeneID:508385 16 GENE SLC30A10 NULL solute carrier family 30, member 10 EMBV3_29975 CCTCCCTTTCCCTCTGTTTGTGGGACTTAGCTGTGGCTTTTACTATAGCTGGCTTGACAC Gene GeneID:617512|CCNDBP1:NM_001046604:196_cdna UTR3_Alt 2 NULL GeneID:617512 10 GENE CCNDBP1 MGC133757 cyclin D-type binding-protein 1 EMBV3_09316 TTTGCTATAAGCCATGTATTGTTTCTAGGATCCTAATCTGTAAGCCATTGAAGACATTGT Gene GeneID:534101|BMPER:NM_001077997:54_cdna Constitutive 2 NULL GeneID:534101 4 GENE BMPER MGC142820 BMP binding endothelial regulator EMBV3_42848 AGACACGGAGGGCCTGAGGGAAATCTTCCGTGCCTCCGCCCGACTCTGGTTCCACTGCCT Variant GeneID:520404|CALML5:NM_001098049:41_cdna 409^620 1 EMBV3_40130 GeneID:520404 13 GENE CALML5 NULL calmodulin-like 5 EMBV3_13352 AGTCAAGACTGCCTGGCTAGATGGCAAGCACGTAGTGTTCGGCAAAGTTCTAGAGGGCAT Gene GeneID:281419|PPIB:NM_174152:13_cdna Constitutive 0 NULL GeneID:281419 10 GENE PPIB NULL peptidylprolyl isomerase B (cyclophilin B) EMBV3_38005 CACCAAGGGTCGCTTTGCTGTTCATCGTATTACACCTGAGGAGGCCAAGTATAAATTGTG Gene GeneID:783463|LOC783463:XM_002707772:8_cdna Constitutive 0 NULL GeneID:783463 20 GENE LOC783463 NULL similar to ribosomal protein S4, X-linked X EMBV3_30659 GCGCTTTTCGCCCTACGCTTTCAACGGAGGAACAGACAAAACAGTCATTGGATGTAGCGG Variant GeneID:514237|PSMB1:NM_001038539:5_cdna 153^260 1 EMBV3_31997 GeneID:514237 9 GENE PSMB1 MGC133525 proteasome (prosome, macropain) subunit, beta type, 1 EMBV3_08193 ACAGAGACTGTCAGGTGCCAAATTCTTGACCCTACGAGACGTGTAGCGAACGAGGACACG Gene BVT0102_009644 + 0 NULL GK000006.2:109826923-109830017 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206279 TCONS_00206278 TCONS_00204201 TCONS_00204197 TCONS_00204200 TCONS_00206277 TCONS_00204202 2 XLOC_124869 XLOC_124368 Coding TCONS_00204202 XLOC_124368 Coding Coding WHSC1 6:109784666-109829960 j TSS152799 6507 1 TCONS_00204202_7 873 19 0.856754906939262 0.00204649119295881 0.000723885565552482 0.000771277498528415 8.47363788268631e-11 0.000368721033616137 0.000144341688047014 0.000381975607597337 7.12578325744121e-05 9.65235454112772e-05 1.15910517545169e-05 2.25396585691224e-23 2.60798254861546e-05 7.78127925534433e-15 0.000389596204182001 0.000126865072039501 3.17004627051096e-30 0.000214515871129215 1.02628735792878e-72 0.000454409734557117 0.000853772362395347 1.54002906007723e-64 4.80385866096316e-44 5.25755741199934e-05 0.000734413704137019 0.00106481918743619 0.000499217932710211 0.000582976811271228 0.000122636256418368 4.27600120868248e-76 7.02958740968673e-68 XM_002688452.2 WHSC1 PREDICTED: Bos taurus Wolf-Hirschhorn syndrome candidate 1 (WHSC1), 0.0 9660 100.00 0.822959889349931 XM_005248001.1 WHSC1 PREDICTED: Homo sapiens Wolf-Hirschhorn syndrome candidate 1 (WHSC1), transcript variant X1, mRNA. 0.0 3009 80.32 0.502535730751498 TCONS_00204202_7 sp|Q8BVE8|NSD2_MOUSE NSD2_MOUSE Histone-lysine N-methyltransferase NSD2; 0.0 1576 88.72 0.973654066437572 3 coding 0 0 1 1 0.0437499013821193 0.759592816399911 0.000986351147657379 0.984988436787952 AGACGGAGGCACCTAGGCTGAATGGAATTCAGCGTCAGGAAAAGCCCTCTTTCTGCTCCAAAGGTGGTGAAGTGCGTGAAGATGAAGCAGGCCCCGGAAGTCCTGGGCAGTGCCAACGGGAAGACCCCTAGCTGCGACGTGAGCCGCGAGTGCTCCGTGTTCCTGAGCAAAGCCCAGCTCTCGGCCGGCCTACAGGACGGGGTCGTGCAGAAGTTCAACGGCCACGATGCGCTGCCGTTCATCCCGGCCGAGAGGCTGAAAGACCTTACCTCCCGCGTCTTCAATGGAGAGCCTGGTGCTCACGATGCTAAACTGCGTTTTGAATCCCAGGAAGTGAAGGGACTTGGGACCCCACCTCACACTACCCCCGTCAAAAATGGCTCTCCAGAAATTAAGCTGAAAATCACCAAAACCTACATGAATGGGAAACCTCTCTTTGAGTCCTCCATATGTGGCGATGGTGCGGCCGCCGTGTCCCATTCGGAAGCAGACGGACAGAGACCAGAGTACAAGGCCCGGAGGAGCCGCAAGAGGAGCGCACAGCGTGGCCCTGTGCTGGAGCACGGCCTCGGGGAGGCCGCCCTGGCGTCCAGGCTCTCCAGTCCCGTGGACAAAAAGATTCCAGTTAAGAGAGAATCCTGTCCGAATAGCAGCAGAGACAAAGGCCAGCTGCTGAAGTACGATGTCGGGGACCTGGTGTGGTCCAAGGTGTCTGGCTACCCGTGGTGGCCCTGCATGGTCTCTGCCGACCCGCTCCTGCACAGCCACACCAGACTGAAAGGTGGTTGCTGAGCACCCGGACGCCTCTGCCGAGGAGATTGAGGAGCTGCTCGCGTCGCAGTGGAACATGCTCAACGAGAAGCAGAAGGCGCGCTATCACACCAAGTTTGCGCTCGTGGCTCCGCCTCAGTCCGAGGAAGACTCTGGTAACTTAAATGGGAAGAAAAGGAGCCACACGAAGAGGACGCAGGGCCTGCGCGGAGACGCTGAAGTTGAGGAGGCCCCCAGGAAGAGGCTCAGGACTGACAGGCACGGCCTGCGGAAGAGAGAGACGATCACTGACAAAACAGCCCGCACGACCTCTTGCAAGGCCCTTGAGGCAGCGTCCTCACTGAAGAGCCAGGCAGCCACGAAACACCTGTCTGATGCCTGCAAGCCCCTGAAGAAGCGCCACCGGGCCCCCGCAGCGGCCGCCACCACCCTCACCTTTAGCAAAAGCTCATCTCCTTCCGCGTCCTTAACTGAGAACGAGGTCTCGGACGGCCCCGGAGACGAGCCCCCGGAGTCCCCGGACGAGAGCGCTGACGAAACCCAGACCGAGGCGTCCGTCTCCTCTAAGAGGTCAGAACGGGGAGCCACCGCCAGGAAGGAGCACGTGTGCCAGCTGTGCGAGGAGCCGGGCAGCCTGGTGCTGTGCGAGGGCCCCTGCTGCGGCGCCTTCCACCTGGCCTGCCTAGGCCTCTCCCGCAGGCCGGAGGGGCGGCTCCTGTGCGGAGAGTGCACCTCAGGGATCCACTCCTGCTTCGTGTGTAAGGAGAGCAAGAGTGACGTCAAGCGCTGCGTGGTGTCGCAGTGTGGGAAGTTCTACCACGAGGCCTGCGTGCGCAGGTTCCCCCTGACGGTGTTCGAGAGCCGGGGCTTCCGATGCCCGCTTCACAGCTGCCTGAGTTGCCACGCCTCCAACCCCTCGAACCCAAGGCCATCGAAAGGTAAGATGCTGCGGTGTGTCCGGTGCCCCGTCGCCTACCATGGAGGGGATGCGTGTCTGGCCGCGGGCTGCTCGGTGATCGCATCCAACAGCATCATCTGCACGAACCACTTCACCGCCCGGAAGGGCAAGAGGCACCACGCACACGTCAACGTGAGCTGGTGCTTCGTGTGCTCCAAAGGGGGGAGCCTGCTGTGCTGCGAGTCCTGCCCGGCGGCCTTCCACCCCGACTGCCTGAGCATCGAGATGCCGGACGGCAGCTGGTTCTGCAACGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGACATCATCTGGGTGAAGCTCGGGAACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTCCCCCCAAATATTCAGAAAATGAAGCACGAGGTTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGATTATTACTGGACTCATCAGGCGCGAGTGTTCCCGTACATGGAGGGGGACCGGGGCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGAGGCTGAAGCGCGTTTCCGTGAAATCAAACTTCAGAGGGAAGCCCGAGAGACGCAGGAGAGCGAGCGCAGGCCCCCGCCCTACAAGCACATCAAGGTGAACAAGCCCTACGGGAAGGTGCAGGTCCACACGGCGGACATCTCTGAGATCCCCAAGTGCAACTGCAAGCCCACCGACGAGAACCCGTGCGGCTCGGACTCGCAGTGTCTGAACCGCATGCTCATGTTCGAGTGCCACCCGCAGGTCTGCCCCGCGGGGGAGTCCTGCCAGAACCAATGCTTCACCAAGCGCCAGTACCCCGAGACCAAGATCGTCAGGACGGACGGCAAGGGCTGGGGCCTGGTGGCCAAGCGGGACATCAGGAAGGGGGAGTTTGTGAACGAGTATGTGGGCGAGCTGATTGACGAGGAGGAGTGCATGGCGAGGATCAAGCGTGCGCACGAGAACGACATCACCCACTTCTACATGCTCACCATAGACAAGGACCGCATCATCGACGCCGGCCCCAAGGGGAACTACTCCCGGTTCATGAACCACAGCTGCCAGCCCAACTGCGAGACCCTCAAGTGGACAGTGAATGGGGACACGCGCGTGGGCCTGTTCGCCGTGTGTGACATCCCCGCAGGGACAGAGCTGACCTTCAACTACAACCTCGACTGTCTGGGCAACGAGAAGACGGTGTGTCGCTGCGGAGCCTCCAACTGCAGCGGCTTCCTCGGTGACAGGCCGAAGACGTCAGCACCCCTGTCCTCGGAGGAGAAGGGCAAGAAGACCAAGAAGAAGGCCCGGAGGCGCCGCACGAAGGGCGAGGGGAAGAAGCCGTCCGAGGACGAATGCTTCCGCTGCGGCGACGGCGGCCAGCTGGTGCTGTGCGACCGCAAGTCCTGCACCAAGGCCTACCACCTGCCCTGCCTGGGCTTGGGCAAGCGGCCCTTCGGGAAGTGGGAGTGCCCTTGGCACCACTGCGACGTGTGTGGCAAACCCTCCACTGCCTTCTGCCACTTCTGCCCCAACTCCTTCTGCAAGGACCACCAGGACACAGCGGCCTTCAGCTCCACCCAGGATGGGCGGTTGTACTGCAGCGAGCACGACTTCCGGGCGGAGCCGGCCCGGAGCGCCCAGACCGAGCAGCCCTGCCCGGGGCCCAGCAAGGCCAAGGGGCGGCGGCGGCGGCGGCGGTGTTGGCGCAGGGTCATGGAAGGCGAATAGCGCCTGGCTGGGGCTGGGTCTGACCAGGGGTGGCCATGGGTGGGCAGGGAGGGCCGGGCCTGGCAGTGTCAGAGGACCCCGCCCTGGCCCCCGGCACAGACGCACAGGCCTCCCCGCGGAGGAGCGTCCTGCCACTGAGCCATCTCAGCAGCGCCCGCTGCGCCCGCACTGACCGTCCGAGCCACGTGGGCGCCCCGCGAGGCGCCGACGTCCCAGGACAGACAGCCTCACTACACAGCGTCACAGCTACACTCGAACCTCAGCCCGTCCCTGCCCCGCTGTCCTTCTAGGCCGAACTTAGGACTGAAGATTAACTGGCACATGAAATGCATTTCTCTCACCCAAGGGGTATAGTGTTTCCCTGAGGGTCTCTCATCCCCAGTCTTCACGACGTTGCCCACCTCCCGCCCGCCCGCGTCACTCAGGAGAGGAGCCCAGGGTGGGGCCTGGCAAGCACCGGGACCCAGGATGCCTTGGGAACGTGGTTTTGACTGTTGCGCTTATGAAACAGCTGTATGGGTTTTTTTTTGTACTAATGTGAAGTTTTCTCAGAGTGCTTCTTTTCCATCCTAGTGAGAAGCCGATAGTATAGCGAGTGAGCCCTGGAGCGGCTCTGGCTGTGGACCGGGCCCCACGGCGGGCCTGCACCCCAGGCCTGGGCGGCTCCCCGAGGGGCCCTCACGCGGAAGCATTTGTGGATAGTTTTGATTGGTTTTTCTTTACCAGTTTCTGGCTTTTACTCTCAATATATTTTTGCTAAACTTGTTTCACAAACTAGCACCGACTGCAATGCTTGTTTACTGATGCGTCCCGAGTTCCCGCAGCCACAGGACGGAGCGGCGGGCGTGGGCCCTGCTGAGGAGCCTGGGCTGCCCGGTGCCCCCGCTGGGCTCGGAGCTTGAGGGGAACCTGTGTCCGACAGCCCTTTCGGGCCAAGGAGAGGCTGCCTGGGCGGGGGTAGCGGGAGCCGGGCTGGGCAGACGGGCTCGGCAAGGGCACTCAGGCCGGGCCGCCGGGCGTGGGCACCTGGCCTTGCAACAGCCGGCCGACGCCCCGGGGTGCCGCGTGGACCTGGGCCTGGGCATGATCCCAGCAGGAGCCCCCCTGCCTGCCCGTCTCCACACGAGGGGAGCGGCCATTCAGCAGGTCTGTTCTCTGACCCTTTCACTGAAACTGCCTGGACGACGTACATCCTGCGGTTTACGCACCTGCCCCAGAAAACCGCGCCTGAGGCCCCGTTCGTCTTGCCATCCCGCGGCAGAATGACGGGGTGTGTGATGCAGTGCTGAGCCGTCGGGGTTGGGGGGTGGTCTCTACGGCCCTGACCCCTGGGAAGCATCTGTTCTGGGTCTGAGGCTCCCACGGCCTCCCGAGCACAGACCTGGGTGGGCGGGGGGTGGGGGGTGCTGCTGACCCAGGCCGTCCCACTGGCCCTTTTCTAGTGACCCTGGGACCAGAGGCAAAGGCGGCTGCGTCCTCGGCAGCCCCACCATCTCTGGGGCACTGGGGGCGTTTCCGTGCAGAGCTCTGTCTGTCAGACTCCGTCTGGAGGGTACTGGGAGGACGTAGGCCACCTCCTGAGGCCCTGTGCTCAGGGGGCCGGGCGCAGCCCTGCCCTGCAGAGCCAGGCCTGGGGAGCGGCCCCCATCCTCTCCTGCCAGGAGGGGCCTCTGCCCACCAGAGCACCGCCGCTGCTCTTGCAGCCGCTGTTCCACTTTGGGCACGGGGGTGCAGGTTAACTTATTTTTATATTTGACAGTAGTCAAGTTTTGCGATCTTTGAGTCACTCTGATATTTCCAAATTCTTTTATGGTTTTTCTGAAGGAAATACTGGAAAACTTAATTTAGATGTGGTTGCCCTCTTTCCAAAAATTATTATAATGAGCAAATAACACTAAGTTCTGAGTCTCTAAGAAGCCAATTCACAGCTCTGAGCAGAACCCGGGCCTGGAGGAGCAGTGGAGAAGGGCCCTCCCGGCGGGGCCGCCCCGAATCAGAGGGGTGCTGGACGTGGGGAATTCAGTCTGCTCTGAACCTCAGCCTCAGTCCTTGGTTGGTAATGTGAGGCCAAAACAAAAGAAAGCTGCCAGAGGGCCTCGGGACTCAGCACGGGGGTGGACAGGCCCCCCGGGTGCTGCCAGCCTCCCGGCCCCCGTCCTGTTCTCCCAAGGGGTGGGGTCACCCTGACACCGTCCCAGGACCCACCCCCCAGCTGGCAAACGGCCACGTGTGTGCAGCCCCTTCTCCAGCCACCTCACGTTCGGGAGTAAGACAAGCCTGTTCGTATCACTCAGTACAGAGACTGTCAGGTGCCAAATTCTTGACCCTACGAGACGTGTAGCGAACGAGGACACGCTCACGTACAACGCTGTCTGCAGGCGGCACGGTGCCCACCGCCCTGCCAAGAAGGGAGCCGAGATGACTCGAGCAGCACACTGCTGCCAGTGTCGGTGGCCCGCAAGGGGGCCAGGCTCCAGCTCTGGGGTACCCGGTGCTACCGCCAGTTCTGACAGACTTAAGAACTTGAACTTCACTTCTGGGGGATATACTGAAATGTAGATTCGCTGTTTGGGGGGAAATAGCATTTTAAGGTCGGAAATTGTGTCTGAAAGATTGTATGAGTATTTTTGTATTAAAAAAAATTTAAAGGCTTTTTTCTTAAACTTGTTTTATGTGGGATTGTGTTGTTTTTTTTCCCCAATTTTCCCTATTTTTTTTGGGGGGGGGGGGGGGCTCGCTGCACAACACGTGGAGTCCTAGGTCCCGTCCAGGATTGAAGCCGCACTCCCCTTCGGCAGAAGCAGGGGTACTAAGCCTGGCCTCCGGGCCGTCCCGCCCCGTCCCAGAATCGTCTGTTGCTGAGCATCTGACACCATCCTGACGTCCGGGGAAAGGCCACGGTGGCCCCGGAAGTGGTCGTGGCGGGGGGGCTCTGAATCTGCCCCTGTCCCCCAAAACGTGGCAGAGTCAGAAGAGGAGGCTTCGCGCGCCTCAGCGCCAAGGCCCCTGGGTCTCCTGACTCAGAGCCTCTGGTGTGC EMBV3_07919 CTCAGGGGGCAGAGAGCGGGGACGATCGAAAGAGCGAAAGCATCTTCTCTCTCCTGACGT Gene GeneID:353113|CACNA1E:XM_002694221:101_cdna Constitutive 0 NULL GeneID:353113 16 GENE CACNA1E caV2.3 calcium channel, voltage-dependent, R type, alpha 1E subunit EMBV3_36247 AGCAAAAAGCAGCCCTTCTGTGATGGCTCCCACTTCTTCAAACGCACTGGCCTATCCCCA Gene GeneID:618350|CISD3:XM_002695950:392_cdna Constitutive 0 NULL GeneID:618350 19 GENE CISD3 NULL CDGSH iron sulfur domain 3 EMBV3_10178 GACCCAGTCCTTGATGATCCTCTACAAATCACTAAAAGAGGTCTGGAAAACCGAGCCCAC Gene GeneID:100337282|LOC100337282:XM_002699838:23_cdna Constitutive 0 NULL GeneID:100337282 X GENE LOC100337282 NULL hypothetical protein LOC100337282 EMBV3_16637 TGCATCTGGAGTGTGCGTTAAGAAAATTCGAGCCTTAGCAGATCACCATGACCTCTTGGT Gene GeneID:767841|ARMCX2:NM_001076960:29_cdna Constitutive 0 NULL GeneID:767841 X GENE ARMCX2 MGC137870 armadillo repeat containing, X-linked 2 EMBV3_37123 TGTTGCTGTCGCCTTTATCCTTGAAGTAGGGCACGTAACGGACCATCCAGTCGTAGATCT Gene GeneID:100335151|LOC100335151:XM_002686535:748_cdna Constitutive 0 NULL GeneID:100335151 3 GENE LOC100335151 NULL hypothetical protein LOC100335151 EMBV3_23520 CCATGGAGATGTCTTTCCGGTTCTGCTCTGACCACAAAAGTCAGTGGTGCCAGGTGAGAA Gene GeneID:533003|D2HGDH:NM_001075978:29_cdna Constitutive 0 NULL GeneID:533003 3 GENE D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase EMBV3_33717 CTCCTACCTGCTGATTCCTGCAGCTTCCTATGTGCTCCCAGAGGTTTCTAAGGTGCTACT Gene GeneID:521926|EIF2B4:NM_001034544:144_cdna Constitutive 0 NULL GeneID:521926 11 GENE EIF2B4 MGC127736 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa EMBV3_11061 TCAGAATATTTCTCCTCTATTCCGTGAATCTCATGTTAACTTGCTTCACGTACTCTATTC Gene BVT0102_372890 + 0 NULL GK000012.2:24194476-24241936 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09656 AATGGGATGATTTGTGGGTTTCTACTGTTTTGTGTGGCCGAGCTGGGGACAAGTAGGTGG Gene GeneID:538493|INF2:XR_084638:507_cdna Constitutive 0 NULL GeneID:538493 21 PSEUDO INF2 NULL similar to inverted formin 2 EMBV3_33502 GAGGACTGCCTACTGACAGGATTGATGCTGCTCTCTTCTGGATGCCCAATGGAAAGACCT Gene GeneID:281915|MMP14:NM_174390:29_cdna Constitutive 0 NULL GeneID:281915 10 GENE MMP14 NULL matrix metallopeptidase 14 (membrane-inserted) EMBV3_37168 ACCCCTAATCCCCAGATCACTTCACCTTTTGCTCTTAGCATGTTTCTGAGCTCCTGCTGG Gene GeneID:618206|SCGN:NM_001099173:161_cdna Constitutive 1 NULL GeneID:618206 23 GENE SCGN MGC159832 secretagogin, EF-hand calcium binding protein EMBV3_15812 ACTAAACAAAGCAGTCCTGCCTTTTAAATCTTGTGGCAGCTCAGGAGGGAGGTGCTTAAG Gene GeneID:518225|CNOT6L:XM_002688375:224_cdna UTR3_Alt 2 NULL GeneID:518225 6 GENE CNOT6L NULL CCR4-NOT transcription complex, subunit 6-like EMBV3_07273 GGTCAGATGAGCTAGGGCCCAATCCCCAGACTCTCTCTTCCCCACGTTATTTATAATCTG Gene BVV0102_402187 - 1 EMBV3_33059 GK000015.2:46344823-46368629 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16811 CTAGAGCATGGCTCCCATCAAAGAATAAATTGTGTCCATGTGCTGGTGAAGAGTGCCCAG Gene BVT0102_142173 + 1 EMBV3_12719 GK000005.2:66128522-66168578 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20684 CCTGTGATCCCCCCTACACCTTTCTAGCATAGTCAGCGGAGTAGAAGATCCCAGCGTTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11522 TAGAAACCCAGTCATTAGCAGACAGGATTACCACCTCACTCAGCCTTGCATATCAGAGGA Gene BVV0102_008487 + 0 NULL GK000030.2:66149416-66721766 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135611 TCONS_00206742 TCONS_00161069 TCONS_00159942 TCONS_00046769 TCONS_00070770 6 XLOC_081834 XLOC_125263 XLOC_097961 XLOC_097556 XLOC_026908 XLOC_042548 NonCoding TCONS_00159942 XLOC_097556 NonCoding NonCoding - 28:3304609-3305411 - TSS119755 802 2 TCONS_00159942_3 73 0.963840399002494 1 0 8.48236151835636e-06 0 0 0 4.5437688603663e-06 0 0 0 0 0.000569462172031055 5.70868081147822e-06 0 0 9.77555312713409e-06 0 0 2.07011158670798e-05 0 0 8.1516962562545e-07 0 0 0.00145656175953603 0 5.72194436253002e-06 0 0 0 0 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 1e-112 410 95.69 0.316708229426434 0 noncoding TTGATCAAAACAGTGTATATGTAAAAGGGTGTATATGTATATGTGTATATTTGATTGTTTAAATTATTATTTGCCTGATTTTAAGTGCCTTTTCTCGTTTTTGGATATTTGTTTTAATCTCACTAAATGCCATAACAAACCACTTGTGGAATCTTTGTTCCTGACCAGAGATCAAGCCATGAGTCTTTGTAGTGGGATTATTGACTCCAGACCCTAGACTACTAGAGAACGAACCCTAGTGCTATTGCTAAGTCACTTGAGTTGTGTCCGACTCTGTGCGACCCCATAGATGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGGGAAGTCGCTCAGTCGTGTCCAACCCTTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTAGAGAACTAACCCTAGGGAGTATCAAATAGTGAGAACTTACACAAAGGAAACCACCTGAATACAAGACTCGGCATCACCCAACCTCCAGATGTGCTGGACGCCTCATCTAAACAACAAACAAAACAAAAATACAAACCCAGTCATCAGCAGACAGGATTACCACCTCACTCAGCCTTGCCCATCAGAGGAAAAACAAATCTCACCCTGCACAAAGCTTACACAAACCACTGGATCAATCTTTGGAGGGCAGAAACCAAAAGGAAGAAAGAATTCAACTCTGAAGCCTAGGAAAAGGACACCTCAGACA TCONS_00158868 r 5' 2240 TCONS_00158868 r 5' 2240 EMBV3_05016 TGTCCTATGCCCAAGGAAACAGGAAAGGTACAGCCTTCAGAACTGAGCCTCCTTCCCACC Gene BVV0102_054047 + 0 NULL GK000021.2:67573316-67578311 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14045 TTTCCTGACCCTGAGGTCAAGCTACCTGATCTGACTGGATGTTCAGGGCCCTTTATGTCA Gene GeneID:506282|EMID1:NM_001101867:41_cdna Constitutive 0 NULL GeneID:506282 17 GENE EMID1 MGC148605 EMI domain containing 1 EMBV3_30799 TCTCTGCTGGAGCGTTCTTTATCAGAGGAGGGATGGGGGCACGTATAGGAAAGAGTCAGC Gene GeneID:511449|NT5C3L:NM_001075515:118_cdna Constitutive 1 NULL GeneID:511449 19 GENE NT5C3L MGC140785 5'-nucleotidase, cytosolic III-like EMBV3_43038 GGAGATGATGCTATGGATAGGACTGAACACAAGCAGCTCAGGCTCTCCCCAGAGTCAGTA Gene BVV0102_037111 + 0 NULL GK000004.2:103277591-103304451 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185091 1 XLOC_111494 NonCoding TCONS_00185091 XLOC_111494 NonCoding NonCoding - 4:103294246-103296539 - TSS137676 1604 1 TCONS_00185091_3 104 0.316084788029925 2 0.301047120418848 0.000118753010917013 8.77045386400444e-05 0.000132694427426108 0 0 0 0 0 0 5.13029211732209e-06 2.85434422287594e-06 0 0 0 3.36459785349456e-05 9.87961907211559e-05 0 0.000234640691725951 0 0.000304873480251029 3.78519505217743e-06 0.000448755605765231 5.7194718803544e-05 0.000198583627858045 1.07987495052608e-05 0 0 1.19765049633406e-05 0.000157381518231812 0.000176169148584617 XR_230978.1 LOC101905297 PREDICTED: Bos taurus uncharacterized LOC101905297 (LOC101905297), 0.0 1476 100.00 0.509351620947631 0 noncoding 0 0 0 0 0.18145859268719 0.149686463738691 0.0969702857963088 0.350985009376901 TGCAGGAACTTCACAGAGCTTGTAGCTGAGATAGAGGACTTCATGGACAGAGAAGCCTGTTCAGAAAACAGTATCCCATTTCTCGCCTTTAAGGTTGGTTACATGAAGAATTCAGGCATCCTATTTTGAAAGAAATGCTCATGAATTGGATGGAAAGACTGGGAGAAAGGGAGCCAGAATGTAAGGACTGGAAACCACCTCCTTTGAGAAAGAAACCAAGAAGCTAAATGTTTGCCCTGAGGAGTGAAGGCTTGTAGAAGACAAAGCTATCTTCACGTGTTCGAAGTGTCATCATGAGAAAGAGAATTGACTTGCTTTACGTATTTGATTGTATTCTGGAAGACATAACTATCAACCCAAGAAAGTCGGTCTTGGCCCTGTTAAAAGAAAGAACTTAGCAATGATTTCAGTAGGTCAGCACAGAAAAGTCATCTCTAGAATTTCTTCCCATTGGCCTCTTGTGAGGATCTTCTTCCATGGCACTAAGCCTGTCCCCCCATGGCCTCCAGCAGAAGGACTGTATCTCTGGGCATTGAGTCCTCCCTCCCAGTCAGTTCTTTTCCAAGATGCTCATGGGGCAGCGAGGAAGAAGGAGAGGCTCTGGACACCTGGAACGGAGATGATGCTATGGATAGGACTGAACACAAGCAGCTCAGGCTCTCCCCAGAGTCAGTACGGTGAGGGGACGTCCATCTCCCTGCTTCATTGTTCTTAGTTATGCCATAAAATGAAGGAAGGGCAAGATGTTGTTTAGTATGTCTTGAAGAAGTAGCTGTGAATAAAGTTGAATGGCTTAAAGAGTCGCTTCTATAGATAGAACATGGCATGTTATGTGTATATGAAAGTGAACAATTTCAACTCCAACATTGAGAATCTCATGGAATGGCAAATAAATTTGCTGAAAACTGACCTGTCTGATAATACTGTAGCTACATGAGTGCATTCATTAAATAAACATTGATCAAGTACCAGCTCTGTGATAGGTACTGTTATAAGCACCAGGAACTTGGAATACGCTGGGGAATAAGACCAATTTCATGCTCCAGTAAACAGCATGGAGGCCATCAGTCTCTGGAGTGCTGGTGAAAGAAGTTAGCTTGGACACAGAGTGAAAGAGGACTAGGAGGGGAGAGATGGAGAGAAGGGAGAATTCAGACAGCTGTTTTCAGGCACTTTGCTGAGAAGGGAAGAAAAGGGACGGTAACTGGAAGACAGGGCTGTAGGGTGAATGATGTAAGGTTGCCAAATAAAATACAGGGAACCTGATTAAGTTGAATTTCAGACAAGTAGGAAGGCTTTGTTTTCAGTTTTTAGTATGTCTTAAATATTGCATGGTGCTGCAGTCCGTGGGGTCGCAAAGAGTTGGACACAACTGAGTGACTGAACTGAAATATTCCATGAGACACACACACTAATATGTTACTTGTTTACCTGACACTGAAATTTACCTAGATGTCTGTGTTTTTACTTGCTAAACGTGGCAAGCTTAAAATTAATAGATACCAGACATGTTGTGAGCTAATGGGGGTGACCCATGGAGTGAAGACAAGAGAAGAAAGTGAGGAGGCGGGGATTCAGTGGACAATGGGGGAGTGGAATATTAT TCONS_00185092 TCONS_00185093 s 3' 2546 TCONS_00185092 TCONS_00185093 s 3' 1764 EMBV3_39286 AGGGATTTCCTGCAGAATTTGCCATGTACTTAAACTATTGTCGTGGGCTGCGCTTTGAGG Gene GeneID:282684|CSNK1A1:NM_174711:25_cdna Constitutive 0 NULL GeneID:282684 7 GENE CSNK1A1 MGC133860 casein kinase 1, alpha 1 EMBV3_04720 AACAAGCCTGGGAACAAGAAACTAAATTAGACTAAAAGAGATTTCTGATATTGCCAAAAG Variant GeneID:282707|CEP290:NM_174722:32_cdna 388^745 3 EMBV3_15936 GeneID:282707 5 GENE CEP290 KIAA0373 centrosomal protein 290kDa EMBV3_19364 CAACAAGAGATAAGGCTAAAGTGATTGTAGCAGGGAAATTCTGTGTCCAGTAAACCCTGC Gene BVV0102_138760 + 0 NULL GK000008.2:29609497-29844406 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01846 AAAGCAGAGCTCCCTGATACTTGGAGCCAGGGTGAAAACAACAGCCCACGTTTCCCATTT Gene GeneID:541261|LHX6:XM_002691490:391_cdna Constitutive 0 NULL GeneID:541261 11 GENE LHX6 NULL LIM homeobox 6 EMBV3_13641 AAGCTGTACAAAAACCCCAGAGCTTAATAAGAGAGAGCTCCCCTGCTGCAGAACCCCAGT Gene GeneID:616123|LOC616123:XM_002690585:28_cdna Constitutive 0 NULL GeneID:616123 10 GENE LOC616123 NULL similar to TRD@ protein EMBV3_01107 GTCAGCTTCTCCTGGAAGTTCAACAACAGCACAGTCAGCAGCGAGAGATTCTGGACCTTC Gene BVT0102_200308 - 1 EMBV3_14334 GK000021.2:71475036-71507508 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228109 TCONS_00228108 TCONS_00228107 1 XLOC_138426 Coding TCONS_00228109 XLOC_138426 Coding Coding - 8:73085149-73092345 - TSS170156 1832 1 TCONS_00228109_3 462 7 0.746351633078527 0.0316960626844146 0.0164036320592228 0.0258164970807032 0.0116078187749974 0.0106580582224051 0.00723774887307924 0.00598349339779916 0.00635864166344713 0.00675115438801781 0.00366709092268647 0.000964449242327534 3.73121130102701e-05 0.00116788812775598 0.00192276404240133 0.00192996963356634 7.38420932413715e-12 1.52349931940883e-12 1.16791513736116e-11 0.0133243480921835 0.0185781934477897 0.00788538010581014 3.7212757547323e-12 0.00350719263206394 2.70465384312713e-11 0.017524601909231 0.0121949082232591 0.0111169929050215 0.000705833251569227 0.00095501776633883 0.00176494179584231 XR_139194.2 LOC100847540 PREDICTED: Bos taurus uncharacterized LOC100847540 (LOC100847540), 2e-138 497 85.86 0.191593886462882 XR_250581.1 LOC101930558 PREDICTED: Homo sapiens uncharacterized LOC101930558 (LOC101930558), misc_RNA. 5e-08 64.4 80.00 0.0376637554585153 TCONS_00228109_3 sp|P01873|MUCM_MOUSE MUCM_MOUSE Ig mu chain C region membrane-bound form; 0.0 560 60.30 0.989177489177489 7 coding 0 0 1 1 -0.122644842424862 0.389454326479362 -0.00274564913981314 0.954651268778198 TTAAGCTGAGACCGTGCGCACGCCGTGCGCACTGTGAGTGTGCTCACAATCGTAGCTGGCCGGCTCCCTCCTGGCGATGAAGCAGCTTTCTCAGTGTGGCTCCCTCACTGCAGAATGTTCAGGGCTGCCTTTCAGAAGGTGAATCGCTCCCGAGAGTCTTCCCCCTGGTGTCCTGCATGAGCTCCCCATCCGATGAGAGCACGGTGGCCCTGGGCTGCCTGGCCCAGGACTTCATGCCCAATTCAGTCAGCTTCTCCTGGAAGTTCAACAACAGCACAGTCAGCAGCGAGAGATTCTGGACCTTCCCCGCAGTCCTGAGGGACGGCTTGTGGTCGGCCTCCTCTCAGGTGGTCCTGCCCTCCTCAAGCACCTTTCAAGGGCCGGATGACTACCTGGTGTGCGAAGTCCAGCACCCCAAGGGAGGAAAGACCGTCGGCACCGTGAGGGTGGTCACTCCAAAGGCAGAAGTGCTGTCCCCCATCGTGAGTGTCTTTGTCCCGCCTCGCAACAGCCTCTCTGGTGACGGCAATAGCAAGTCCAGCCTCATCTGCCAGGCCACGGACTTCAGCCCCAAACAGATCTCCTTGTCCTGGTTTCGTGATGGAAAGCGGATAGTGTCTGGCATTTCTGAAGGCCAGGTGGAGACTGTGCAGTCCTCACCCATAACTTTCAGGGCCTACAGCATGCTGACCATCACAGAGAAAGACTGGCTCAGCCAGAACGTGTACACCTGCCAGGTAGAACACAACAAGGAAACCTTCCAGAAGAACGTGTCCTCCTCATGTGATGCTGCACCACCATCTCCCATCGGGGTCTTCACCATCCCCCCATCCTTCGCCGACATCTTCCTCACGAAGTCAGCCAAGCTGTCCTGTCTGGTCACAAACCTGGCCTCCTATGATGGCCTGAACATCAGCTGGTCCCGTCAGAACGGCAAGGCCCTGGAGACCCACACGTATTTTGAGCGACACCTCAACGACACCTTCAGCGCCCGGGGTGAGGCCTCGGTCTGCTCGGAGGACTGGGAGTCCGGAGAGGAGTTCACGTGCACAGTGGCCCACTCGGACCTGCCCTTCCCAGAAAAGAACGCCGTCTCCAAGCCCAAAGACGTCGCCATGAAACCGCCGTCCGTGTACCTGCTGCCTCCAACGCGGGAACAGCTGAGCCTGCGGGAGTCGGCCTCCGTCACCTGCCTGGTGAAGGGCTTCGCGCCCGCGGACGTGTTCGTGCAGTGGCTGCAGAGGGGGGAGCCCGTGACCAAGAGCAAGTACGTGACCAGCAGCCCGGCGCCCGAGCCCCAGGACCCCAGCGTGTACTTTGTGCACAGCATCCTCACGGTGGCCGAGGAGGACTGGAGCAAAGGGGAGACCTACACCTGCGTCGTGGGCCACGAGGCCCTGCCCCACATGGTCACCGAGCGGACCGTGGACAAGTCCACCGAGGGGGAGGTGAGCGCCGAGGAGGAAGGCTTTGAGAACCTCAACACCATGGCCTCCACCTTCATCGTGCTCTTCCTCCTGAGCCTCTTCTACAGCACCACGGTCACCCTGTTCAAGGTGAAGTGACGGCCAGCCAAGAACATGGGGCACCAGAGACGGAACACGAGGGGCTGCCTTGGGGCCGGGTCCCTGGCCTATGTGGCTTGTCCGCTTGTACTGAAATTTTCCCTGCGTCCTCTCCAGCTTCAAGCTGTAAGAAACTGGCTTTTCTCGGAGCAGCTGAGTGCCATGGCCAAGCATGGAGCCCGCAGTAATAGGCTCCACCTGGCCCTGCTTTGCAATGTCGCATTTGTGGCCTTGAAATAAACAAGTATACTTTATCTTGTGAAACCG TCONS_00225843 TCONS_00225844 r 5' 62419 TCONS_00225843 TCONS_00225844 r 5' 55499 EMBV3_21201 TTTGCTAGGCCTGCTCAAGAGGCTGGAGATCTTCGTGGCATGTGTCATCTTCGCCTTCCT Gene GeneID:529925|LOC529925:XM_002696544:34_cdna Constitutive 0 NULL GeneID:529925 21 GENE LOC529925 NULL similar to myeloid-associated differentiation marker EMBV3_21450 TCCCTACCACACAGCACTTATCCTTCCAGACACTTGGGGAAAACAAGAGAACTTTAGGCC Gene GeneID:574056|TNFSF8:NM_001025207:53_cdna Constitutive 2 NULL GeneID:574056 8 GENE TNFSF8 TNFRSF8 tumor necrosis factor (ligand) superfamily, member 8 EMBV3_06506 CCAGATCAAGCAAAAACCACTTTCCTCTCACTCTGGAGTCCGCCAACCACTCCCAAACAT Gene GeneID:100300510|LOC100300510:XM_002687093:351_cdna Constitutive 0 NULL GeneID:100300510 4 GENE LOC100300510 NULL hypothetical protein LOC100300510 EMBV3_09551 TCCTGCTGCTGGTGCTGCCGCTGCCCGCCTGCCTCAACCCCCTGCTCTACCTGCTCTTCA Gene GeneID:100336662|LOC100336662:XM_002694285:332_cdna Constitutive 0 NULL GeneID:100336662 16 GENE LOC100336662 NULL leucine-rich repeat-containing G protein-coupled receptor 5-like EMBV3_08009 AAACGTCAGTTTGAAGAGGCGGAGCAGCAGGCCAACACCAACCTAGCCAAGTATCGAAAG Gene GeneID:521764|LOC521764:XR_083838:464_cdna Constitutive 0 NULL GeneID:521764 13 PSEUDO LOC521764 NULL similar to Myosin, heavy chain 7B, cardiac muscle, beta EMBV3_32487 AGCCATCCCTCAAGGTCAAGAGCTCCTAGGTCACGGATACACAGGGGAGCCCGTGGCAAA Gene GeneID:100297707|LOC100297707:XM_002697855:348_cdna Constitutive 0 NULL GeneID:100297707 25 GENE LOC100297707 NULL hypothetical protein LOC100297707 EMBV3_11290 TCATCCAGCTCCCTAGCGGCCTTTTCCATTCGAACCAAAGTCTCTGCTGTCACCCCACCT Gene BVV0102_083728 + 0 NULL GK000014.2:2232450-2235032 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051075 TCONS_00051074 1 XLOC_031090 Coding TCONS_00051074 XLOC_031090 Coding Coding FAM83H 14:2224035-2233564 = TSS38169 5193 1 TCONS_00051074_6 1181 5 0.455499580184719 7.42325875675068e-05 0 9.58659363696458e-05 6.05394620176139e-06 0.000172842744720387 3.03007382389271e-05 0 8.25876320030279e-07 2.70293465471479e-06 0 1.26815973403305e-12 6.74369635250203e-06 4.06684176649853e-07 0.000256215224272301 2.0415096719086e-06 0.00269018246447873 0.00525876057452953 0.00109583939741895 0.000230501212456057 3.90351607973429e-06 4.37258283105109e-05 0.000634848000567481 0.00125618700220269 0.000735273641658291 0.000322873651273872 1.46398002487946e-05 0.000449016026142699 8.65075216038506e-09 2.78550581239028e-05 3.67947998930446e-09 XM_002692552.3 FAM83H PREDICTED: Bos taurus family with sequence similarity 83, member H (FAM83H), transcript variant X1, mRNA. 0.0 9366 100.00 0.999807433082996 NM_198488.3 FAM83H Homo sapiens family with sequence similarity 83, member H (FAM83H), 0.0 4004 84.32 0.703446947814365 TCONS_00051074_6 sp|Q6ZRV2|FA83H_HUMAN FA83H_HUMAN Protein FAM83H; 0.0 1964 85.82 0.999153259949196 1 coding 0 0 0 0 0.0791909887649685 0.494979328904496 0.0418796217875832 0.457924194855202 GTGGCTGCCGGACCGACCGGACCGCGAAGCCGCTGGGCGGCGGTCGGCTCCTGCTGCCCTTGTCCCGAGACCCCGCGCACCTGGCCAGGTCCCTGGCCCCAACATGGCCCGTCGCTCCCAGAGCTCCTCCCAGGGGGACAACCCACTGGCACCCGGGTACCTGCCCCCGCACTACAAAGAGTACTACCGCCTGGCCGTGGACGCGCTGGCTGAGGGCGGGCCAGAGGCATACAGCCGCTTCCTTGCATCGGAGGGGGCACCCGCCTTCCTGTGCCCCGAGGAGCTGGAGCACGTGAGCCGCCACCTGCGGCCGCCGCAGCATGTTGCCCCCGAGCCCCCCGACGGCAGCCCCCCCAATTTGGACTTCGATGGCTCCTCCGGTACTTACTGGCCTGTGAACTCCGACCAGGCAGTGCCTGAACTCGACCTGGGGTGGCCCCTGACCTTTGGCTTCCAGGGCACTGAAGTCACCACACTGGTTCAGCCACCGCCACCTGACAGCCCCAGCATCAAGGATGAGGCTCGAAGGATGATCCGCTCTGCCCAGCAGGTGGTGGCCGTGGTGATGGACATGTTCACCGATGTGGATCTTCTCAGTGAAGTGCTGGAGGCTGCTGCGCGCCGCGTCCCAGTCTATATCCTCCTAGACGAGATGAATGCACAACACTTCCTGGACATGGCCGACAAGTGCCGAGTCAACCTGCACCACGTGGACTTCCTGCGCGTGCGCACTGTGGCGGGCCCCACCTACTACTGCCGCACTGGGAAGTCCTTCAAGGGCCACGTAAAGGAGAAGTTCCTCCTGGTGGATTGTGCCGTGGTGATGAGTGGGAGCTACAGCTTTATGTGGTCCTTCGAGAAGATCCACCGGAGTCTGGCGCACGTGTTCCAGGGCGAGCTGGTCTCCAGCTTCGATGAGGAATTCCGCATTCTCTTCGCACAGTCCGAACCGCTGGTACCCTCGGCCGGGGCGCTGGCTCGCATGGACACCTATGCCCTAGCTCCATACGCAGGGGCTGGGCCGCTCATGGGCAGCCAGATGCCCGGGGCTCCCACCCCCTTCTCCTTCCCCAAACGCGCTCACCTCCTGTTCCCACCACCTCGGGAAGAAGGCCTGGGCTTCCCCTCCTTCCTCGACCCCGACCGCCATTTCCTGTCGGCCTTTCGCCGAGAGGAGTCTTCGCGGATGCCCGGGGGCGCCCTGGAGCCGCACACGGGGCTGCGGCCGCTCTCACGACGGCTGGACGCAGAGGCCGGGCCAGGCGGGGAGCTCTCGGGCCCGCGGGGCTTCTTTCAGGCACGGCACCTAGAGATGGACGCCTTCAAGAGGTACAGCTATGCGGCCGCCGACGGTGCGGGCGCAGTGGAGAATCTCGCGGCCGCGCGGCAGGTATCACGGCAGACGTTCCTCAGCCACGGCGATGACCTCCGCTTCCAGACCAGCCACTTCCACCGCGACCAGCTCTACCAACAGCACTACCAGTGGGACCCGCAGCTCGCGCCAACGCGCCCACAAGGCCTGTTCGAGAAGCTGCGGGCCGGCCGCCCTGGCTTCCCAGACCACGACGAATTCATGCTGGGCACCGGGCCACGATTTCCAGAGCTCGGCCTGGACGGACACCAGCGGCTGGACTACGTGCCATCCAGTGCCTCACGGGAGGTGCGCCATGGCTCGGACCCCGCCTTCGGGCCCGGACCTCGCGGTCTGGAACCCGGCGGGGCCCCTCGCCCCAACCTGGGCCAGCGCTTCTCTTGCCAAGCGATGACGAGGCTAGGCCCAGAGATGGCACCCGAGCCGGAGCCGGAGCACAGGGGTGGGCCTGAGGGGCGGGCCGGCCTGCGGCACTGGCGCCTCACCTCCTACCTGAGCGGCTGTCACAGCGAGGACGCTGGCGACGAGGGCCTGCCCACACCCATGGAGACGGAAGCCTATGACGATGACGTGCTGGTTTCTGGGGGTCGGGCGACTGCTGGGGACCTACTTCCCTCGGCCTTCCGTGTGCCCGCGCCCTTCCCAGGCAAAGGCCCAGCTCCGGGCTCTGGCAGCGGTGGCGGCGACGGCCCAGAGCGCGAGGGCCTGGAGGAGGTGGGCCTGGCCAAGCAGGACTCTTTCCGCTCACGCCTGAACCCGCTGATCCAGCGCAGCTCCCGGCTGCGCTCCTCGCTCATCTTTAGCGCATCGCAGGGCGAGGGCACGGGCGGACCCACTGGGGCCTCCACGGAGAAGGTGCAGCTGCTGCACAAGGAGCAGACGGTCAGCGAGATGCTGGGGCCCGGCAATGAAGCCGTGCGCTCTGCTGCCTCCACCAAGGTGGCTGAGCTCCTGGAGAAGTACAAGGGCCCCTCTCGAGACCCTGGCGGCGTGGGGACAGCGGTCACAGCCGCCAGCCATAGTAAGGCTGTCGTGTCCCAGGCGTGGAGGGAGGAGGTGTCTGCGCCCGGTGGCGGCAGTGGGAGCGAGCGCCGCAGCCTGGAGAGCTGCCTGCTGGACCTGCGTGAGTCCTTTGCACAGCAGCTGCACCAGGAGGCAGAGCGACAACCGGGAGCTGCCACTCTGGCCTCCACCCAGCTGCTGGACACGCTGGGCCGGGGCAGCAGTGGCACGGACCGGCTGCCCTCCCGCTTCCTGTCCACCCAGGGCCACTCCACCTCCCCGCAAGGGCGGGACAGCCCCCCACCAGAGGGGCCTGGGGGGCAGCAGTCTGAGCCAAAAGGGAGCCCCACCTTAGCCTACCCGGAGCGCAAGGGGAGCCCCACTCCTGGGTTTCCCACCCGCAGAGGCAGCCCCACCGCTGGATTTACTGAGCAGAAGGGGAGCCCCACTTCTGCCTACCCTGAGCGCAGGGGTAGCCCGGTGCCTCCTGTTCCAGAGCGCAGGGGCAGCCCTGTGCCCCCTGTGCCTGAGCGCAGGGGCAGCCTCACCCTTCCCTTCTCCGGGGAGTCTCCGAAGGCCGGGCCCACAGAGGAGGCAGTTGGTGGCCCCATGGAGGTCCTGCGCAAAGGCTCCGCGCGACTGCGGCAGCTGATGAGCCCCAAGGGTGAGCGGCGGGCAGACGATGAAGGCAGCTTTCCAACGCCGCAGGAGAACGGGCAGCCTGAGAGCCCCCAGTGGCCGTCCCTAGTCCGGGTTGACAGCACCGAGGCGGCTGCAGAGGAGCGGGGCCCGCGGGCACGCGTGGCTTCAGCCACAGCCAATGCCTTGTACAGCAGCAACCTGCGGGACGACACGAAAGCCATCCTGGAGCAGATCAGCGCCCACGGCCAGAAGCATCGTGGAGTCCCCGCCCCGGGCCCAACCCCGGCCCACAGCAGCCCAGAGCTGGGTCACTCGCCAGTGGCCGGCGGCCTGGCGCCTGACATGTCCGACAAGGACAAGTGCTCGGCCATCTTCCGCTCGGACAGCCTGGGGACCCAAGGCCGGCTGAGCCGCACGCTGCCTGCCGGCGCAGAGGAACGCGACCGGCTCCTGCGCCGCATGGAGAGCATGCGCAAAGAGAAGCGCGTCTACAGCCGCTTTGAGGTCTTCTGCAAAAAGGAGGAGCCAGGGGCTCTCGGGGCCGCGGAGGGCCCTGCCGAGGAGGACGCCAGGGACAGCAAGGTGGGCAAGTTCATGCCCAAGATCCTGGGTACATTCAAAAGCAAGAAGTGAGTTACCTGGCCTTCCAGCCTAGGCCGAGGTGCCTGCATCACCGTTGGGCAGAACACTTGGCCCTCAGCCAAAGCCCAGGGACCCAGCTGAGCCAGCCAGAGTCTGCTCCACCTGAGGCTCAGCAGGCGGCCCTCCTGGCCTCGTGCCCCTGGGTCTCTCCTCCCTTAGAGCTTCAGCCCCAGCTGCCCACTGACTTACCACCCCAGCTCTGGGCCTGCACACCTCCGCCTCTGGACCCTTAGCCTCCCCTTCTTAGGCATCTGTCTCCCCCACCTCTCTGTGCCTTAGGCCCCCATACTCTGGGGTCCGTGTGTCTCAGGGCTTCCGTGTCTCAGGGGTCCCCTCTGCTCGTGGCCTGGCTGGGCTGCCCTTGTCCACTGCCTGGCATCCACTCCTCTCTAGGCCTCCCGTCTTCTCAGGGCCTGTTTCCACACCCGTGTTTGAGGTCTTAGGGCTCACTTCCTGCCCTTTCCCCAGCGCATCCCTCCTTCCCTCCCTCCTGGCCCCTTCCCTGGTCCCCGACCCTTCAGCGGGGGAGGGGCTGCCCCGGTGAGAACTGAACCAGGTGTGGCCGCCACTCCTGCAGGCCCCGGCCAGCACCCTGCAAGGGTGAGAACCCCTGGCTTTGTGGCACAACAAGCCCAATGGATGATGGGAGGCCCTGGCCTCACGAAGCATTCCTGACAGATGGCATGTTCACAGGTGCATCCGCAGTCACACCTCAGAAAGGGGCTGGATGTGGAGCCTTGTTCTGTGAGGGCAGAGGACGGTGTGCGATGGCCCCTGAGCCCCGGCACACTGCTCTGAGGGGTCTTGGTGCCCCTGACGTGGGACCTCTGCACCTCAGTCCCTCATCTAAGTGGTCCTTGCCCTGCAGGTGCCCAGCAGACCCAGACTCCACCCTCTTGTGCATCCTTTCCCCTTTGTCACCAGCCCCCCAAAAATCTGTCCGAGGTTCCCCATGTAGCTTTCTTGTATCTTTTTTTTTTTCACTTCCAGATAGTAACTGATCTGGAATGATTCATTTTGGCACCAAATGCTTCAAAAGCCGCCTCTGCCCTCACCATAGGTGCTGGTGTTCTTAAATTGGTGTTTGTGCTATTTCTTTTTAAATAGTTTTTTTTTTTTTTAAGTATAAGAAACCCTAATTGCTCTTTGGGGACTGCCGGGTATGGCCTCAGTCCTGTCTGAGCCCCTGCACCCTGGTGGCCCACGGTCTCGTCACCAAAGCCACTGCCCAGGTGGGGTGACAGCAAAGACTTTGGTTCGAATGGAAAAGGCCGCTAGGGAGCTGGATGAGCCAGAGTGTCTCTGGTCCTCGATGTGCTTGCTGACACGTTTGGTTTGGCCTGGCCTGGTGTGCAGCTGTTCTGAGCAGACCGGGCTGGGCCTGTCACTGACGGACAGCCCTCGCAGAAAGTGGAGGTTCTGCCCAGGGAGAGTCCCAAGGCCCTCGGACCCTCCTGTCTGCGTCCTTCACATCATGCTCAATAAGACCTCACCTCAATGTGATTCTGCGCATTTTGGTGTTAATAAAAAAACAA EMBV3_00778 TCATTCCTGCTGGTTTTCTGAGGCTTCACAGTGACCTTCTACTTCAGGGAAGGTATGTCC Gene GeneID:535023|FAM107B:NM_001046393:127_cdna UTR3_Alt 1 NULL GeneID:535023 13 GENE FAM107B C10orf45 MGC137524 family with sequence similarity 107, member B EMBV3_14036 TATATGAATAAGAGGTGGTCAGCATCAGTCCCTTCAGGCACCACTTCCTGTGTTCCTGGG Gene GeneID:615447|NME1-NME2:NM_001076376:27_cdna Constitutive 0 NULL GeneID:615447 4 GENE NME1-NME2 NME1 NME2 NME1-NME2 readthrough EMBV3_24151 AAAATAGTGATACAATGGTAGGGAAGTGGGGGAGGAAAACCCAGGAGACAGCAGGAAGGC Gene GeneID:100302527|LOC100302527:NM_001163442:2_cdna UTR3_Alt 1 NULL GeneID:100302527 X GENE LOC100302527 NULL hypothetical protein LOC100302527 EMBV3_07028 CTTATGCCCCTCTATCTTTGTCTTATAGGGACTTTAGGGGCCATTTCTTGATGTCTTGGC Gene BVT0102_159933 + 1 EMBV3_13102 GK000002.2:89513282-89517708 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102848 TCONS_00102847 TCONS_00102845 TCONS_00102846 TCONS_00102849 1 XLOC_061963 Coding TCONS_00102847 XLOC_061963 Coding Coding SGOL2 2:89485765-89514823 = TSS76499 5874 1 TCONS_00102847_4 1310 0.0820565202587674 8 0.798120934714527 0.00295480558952272 0.00343020465170853 0.00166651441571513 0.00148506627032496 0.00155086101700785 0.000589920958167942 0.00179740099134829 0.00152791069604781 0.00387875848513395 0.00114307182668648 0.000737604434923836 0.000668442995188033 0.000404599283778373 0.00161574897507514 0.00192120312944663 0.0130550988758704 0.000213236730119174 0.00159341389599538 0.000684601914652784 0.00130764086333978 0.000597727365017083 0.00592601086038008 0.0017492955535625 0.00231661154681508 0.00153568783516866 0.000846398522561587 0.00116403164031506 0.00124300597832412 0.00121692004082798 0.00263987361732839 NM_001191290.2 SGOL2 Bos taurus shugoshin-like 2 (S. pombe) (SGOL2), mRNA. 0.0 9764 100.00 0.921518556350017 XM_005246344.1 SGOL2 PREDICTED: Homo sapiens shugoshin-like 2 (S. pombe) (SGOL2), 0.0 1929 78.13 0.38661899897855 TCONS_00102847_4 sp|Q562F6|SGOL2_HUMAN SGOL2_HUMAN Shugoshin-like 2; 0.0 1046 64.88 0.670992366412214 0 coding 0 0 0 0 0.0448359758983565 0.868801166194648 -0.0104964420567128 0.833115426654682 AAACCCAAGCTCTGGCCGCGAACGCCGGGCTCCCGGAGCTGGGTGCTGGTTCCCCCGACCCTGAAAAAGCGTGATGGAGTACCCAGCAATGGAAACCAGTTCACTTTTTACCTCAGGAATTAAGAAACATGTGAAAGACAGAAGAATTTCAAAGACTACTAAGTTAAATGTTTCTCTTGCTTCAAAAATAAAAACAAAAATAATAAACAATTCTTCTATTTTCAAAATTTCTTTAAAGCATAACAACAGGGCATTAGCTTTGGCTCTTAGTAGAGAGAGAGAGAATTCTCGCAGAATTACAACTGAAAAGATGCTGTTGCAAAAAGAAGTGGATAAACTGAATTTTGAGAACACGTTTCTTCGTCTAAAGCTAAATAATTTGAATAAGAAGCTTATAGAAATAGAAGCACTCATGAACAATAACTTGATAACTGCAATTGAAATGAGTGCTCTTTCTGAGAGGGTTCCATTAACTTCAAATGATGATGATGATGAAGATAAAGAGAAAATACAGTGTGATGACATCACCATATCAAAGACATCACCTGATAGTCCCTCTTTGGTATCAGCAAGACCAGTATCAACTCAGAATAATTTGAGATTGCTATTTGTTAAAGAAAATGATCAGAATGTTTGTAGTGTAAATGATTCAGAACATGTTTCTTCTATTGTTGATACACTTCCCAAAGGAAACCATTCCCACTCAGACCAAAGTTCTAGGAGCTCTCTAACAAGTGAGAAGAAAAATGCCCAGGCGATCAGCCACAAAAAAGAGAAGTCATCTCCTAGTAATGTGACTAAAAGGAAAAAACGTGTTTCATCTTGGGAGTCAGATAACCCTGCAGACACTCCCTGTGTAACAGATTTAGATCAACAACAGGTTTCAAGTCCAATATTAAATTGGAATAATGAAATAAAAGATTACACTAATGAAACAAATACAATGCAGAGAAACATATTGTGCCTTCCTGCCTCATCTGAGTCTGCAAGTGAACCTCCTACAAAAGGCATGAATCCACTTCAGGGTAATGACTTTCAGTTGCAGAAAACTGTGTATGATGATGACATGGATTTAACTGCTAGTGAAGTCAGCAAAATTATTACAGTTTCAACAGGCACTAAGAAGAAAAGAAAGAAAAATTCAGATGATTGTGGAATGAAAACTTTCAGAAAAGTGAAAGATCCAAGCTCTGAAAAAAAGAGAGAAAGATCAAAGAGACAATTTAAAAATTGTTCAGGTGCGAATATTGAGGAAAAAATTGAAAGTGGACCAGAAGATAGATCTGTTGACCTAGATGGTGAAGGGGATTCAAGAGATCCAAATTTTATCTTCAGTACTGAACAGTTGACTCAGTTGAACACGTGGAAGAAAATAACCCTTCCTAATGGCTTTGATCAGGGTGACAAACAAAGTATGCAGTGTAACCAAAAGAAGAAAAGAATTCATGTAACAGATGAGCAAGAGGAAACATATTCTTTCTCCCAAAGTTCAGATAAATTCCCACAGGATAGTAAATTTGATTTGTGTCCGAGTTCTCTAACTTGTAAGAAGAGTAAAGCTTCTAGACAGACATTTGTGATTCATACGTTAGAAAAAGATAACTTATTCCCAAACCAAAAGGTTCAAGAAACCACCTCTGAAAACCTAGGTGTCACAAATGAATTTCAAACAGCTTATCTTTCCAACAAAGGTAATCCAAAGTTATGTGATGATGAGACCCAAAATATGTTTGATTTGAAAAAGCATGTCACTGATACACAACCCACTCAGCAAAATGAATCAAAAATAAATAAAGATTGGCAGAAAATAAATCGGAAAACAGAAATAATTTCTAAAATGAACCAAATACTTGGGGATAATACTAAAGATGTGCAAGGCCCAGAAAAAGGTAACTTTTCCTTCCAAACCCAAGAGGATAAAGAAACCATCTCTAGAAACCTAGATGTTTCAAATGAGTTTCAGAAATCTGTTCTTTCCACTGTCAATAATGGAAACCTGTGTGATTGTGAAACCCAGAATGTGTTGGGTTTGCAAAAGCAGATCACCTACGCATACCCTGTGCAGCAAAATGAATCAAGAATTAATAAGACTCTTAAGCAGAAAGTAAATCGGAAGACAGAAATCATTTCCACAGTGAATCATTTAGATAACACAAGTGAGTATTGCCCAGAAAAGGGTAAAGAAATCATCCCTGAAAATCCACTGGATACACATGAGTTTCAGACACCCACTCTTTCTTCCAAAGACAGTAGAGACCTATATGATTATGACACTCAGAATGTTTTGGGGCTGAAAATGAATGTTCATGATATACAGCCTGCTTGTCAGAATGAATCAAAAATAGATAAGCTTAGGCAAAAGGTATGTCGGAAGACAAAAATCATTTCTGAAGTCAACCAAATATATATGAGTGATGACAAAGGCAGGCATGACCCAGAAAAAGGTAACTTACTTTCTCTAATCCAAAAAGATAAGGAAATCATCCCTGAAAACCTGGAAGACACAAATGAGTTTCAGATAGTTGACCCTTCCCCCGGAGTTAATAGGAACCTATGTGATTATGAGACTCAAAACCTTTTAGGGGTGAAAAAGTGTGTTACTGATACTGGGAAGCAAAAGGAATCAAAAATAAATAAGAGACCCAGGCAGAAAGTAAGTCGGAAGACAGAAATAATTTTGGAAATAAACAGAAAAAATGAGTTTAACAATAAAGGTATATGTGACCCAGAAAAAGGTGACTTCTCCCTAACCCCAAATAATGAAGAAACCATTGCTGAAAACCTAAAAGTCACACATGAATTTCAGACAATTTATCTTTCCACCAAAGATGATGGACATTTATATGATTATAAGACCCAGAATATGTTGGATTTGACAAAGCATGTCACTGATAAGCAACCTACTCGGCAGAATGAATCAAAAATAAATAAGAACCTTAAGCAGAAGCAGAAAGTAAATCGGAAGACAGAAATAATTTCTGAAATGTGCCAGATATATGAGGTTAATGATAAAGATGTGCATGGCCAAGAAAGCTACACAAAAAATCTTGATTTTAAAATAAATAAACAAAGACCTGAAGGCCAAGCTGTTAGTGGATACTGTATGGAAATCAACAGTGATGAGAAAGAAAATTGTGATGAAATTTCAAATCCTTATAAACCAATTAAAAAGCATGGGAAAGAATCAGACAAGGCAAAGAACATTTTGGCAAAAAGTGACAACATGCCTGTTTTGCAGTTGACAGGTTCTTCACAGATGTCTGTCTTAAATCTAGGTTTAAAACATATTACTGATGAGGCAGATTCTGACACTGGAAACCACATGGAACCACATAGGAGTCCGAAGCTAAGCACTAAAACTCTGAATAGAAAGAGAAAGAGCCACTTTGTGGAGGTGACGAAGGAAGGAGAGTGCCAGGTCAAAAAAGTAAATAAGATGACATCCAAATCAAAGAAAAGGAAGACGTTCGAAGACCCTTCTCTGGATAGTCACGAACTAGTGGAGATGATGTCCGACACCATTCAGGAAGTGCCAGTTGAACCTGAGTACACTGTTAAGGGAAAAAAGTTGGAAAATGTGGAAACTGTCAAAATTAAACCAGACTTTTACACAAAAATGTTGATACCTTTATCTCAAATGTATTCACCTAGCAGACAAGATTCCTCCCGTAACAGTGTTCTTGAGGGTTCAGTACCTTTGAGTATTTCTTCTAATAAAAATCTGAAAGAAAATTTTGCCCCAGAGAGCTCACCCATCTTTCAACTAAGTGATGAGGTACATGAGAAGATGAAAGACATGAAATTTAAAGTCGACCAAAGACCACAAAGATCAGAAATAGGTGTTAGAATGCTACAAGACTTGACAAATACCAGTTTTGTTTCAAATACCGCTGCTAAATTTGAAAACAAGGTAGAAGACCTATCTTCAGAGCTGCCAAGCCGAAGAAGAAGGTGTACTCCTCTCTCTTTAAAGGAGCCAAGTCTCAAAGGGAAGATGAGAAGATGAGGTGAATTTATACATTCTGGTTTTCCTGAATTCTCAAACCATAGCAGTTCAAAACAGGGATCTAACTAGGATCAAGAAGATGAAAAGCATGATGAAAAGTTCTGGGTTTTTTTTTTTTTTTTTTTTTCATCTCCTGCTTTTCTGTGGAGTGTTTATTTTTATGTATAGATAATATGCATTAAATAGCTATTTTGTAATATTAAGGACTTTAAGTTATTTTGGTCATCTTATAACTTATCTTCCTGCTCATTTAATCTCCTTTCAACCAAACAACCTTTAACTAAACAATAGCTATTAACCTTTTAACCGAATAAAATGTATTATAAATACTTTTGCACTGATTATCTTGTTATACACCAAACTACCTTGTTTTGTTTTATTTTGTTTTTAAAACCATTCAGTAAATGTGAACACCTATAAAATTTTAAAAGTCACTTTCTGCCCTGGCCAGTTTTCTCTCACTCTTCATTCTTCAGCTTTCAAAATTACTTGTTTACTGTCACCTGCTGCATTACTTCCATTATATGTAATCTGATGACTTGAGTAGGTTTATCTCTCAGGTGCTTTTGAATTTGGTTTTTGTAACTTTAAAGATCACTTATTATTCCAGTATTAAAACGTAGTAAATCCTATTCGTATCTGAGATTAACAAACATAGCTTACTGTATTGAAGTGATTAATAAAAATGTATTCTGCCTAGATGGAAAAGCTTTCTTATATCCAGCAACTAAATATCCAGCAACTAAAAGAATGAGCCCAAGAAATCTACATTTTGTTTAACAAACACCTCAGATAATGCTGGGGCAGACTGTCCTAGGACCAAACTTTGAGAAACAGTTGTAAGACCACAGAGTCCCATAGAACTTACTCATTTATCAACAGTGTGTGTTGAATGGAGGCTACATGCTTTATTAAAGGAACAATTTACACTAGTTTAGAGCGTGGCACCCTGATAGTTTTTCCTTTCCTGTATTATTATTACTTGAAGGCTTTGAATCTCTGTCATTATCTGGTATTTGGTTTCCTAGTGTTTCTATTTTTTCCTCCTTTCCATGAGGTTTGTCTTTTTGTTGTTGTTCCCATGCAAATTAGTTTTCATTGTATCAGACTTATAATCTTTTATTGTTGGAACTCAGTCACATTAAGAAAGTTTTCCTGTTCCCAGATTAAGAGAGACATTTACCCATGGTTTCATTTTGTTTTGACATTTAAATTTCTGATTCATGTGGATTTTGTTTTATGGTGAGATATGAACACAATTTTTGACCTTTTCCCAAAGGATTGCCCGTTAATTAAAAAGTCCATGTTTTCCACTACTGATTTGAAGTCCCACATTTTTCAATGTTGTATTTCCATATACACTTAAACTTATTTCTCAATTTTCTGTTCCCTCTACTAGTTTCTGTCTTTTTATGCCCCTCTATCTTTGTCTTATAGGGACTTTAGGGGCCATTTCTTGATATCTTGGCATTCTTTTTTCCTGGTAATACATATAAATGGAGTCTTTGAGTCTCTTTTCTAATTGATTATCACTTGTATATATGAAGATTACTGATTTCTGTATGTTAATTACTAAACTGTTATTGTTTATACTATTTTCCAGATATATATTTATATATATATTTGAAAACCGGGCTATTTTTCCTGCTTTCTCTCCAATTCTTAGGCCTCTCACTGCTTTCTCTTATGTAACTGCATGGCTGCTACCTTATATTTAGTGTTAAATAGCAGTGAGAATGGTGGATATCATTGTCTTGTTCCTGATTTTCATAGGAATGCCTCTGGCTTTACTGCATAAGTAAGATGCTGTGAAATGAGCTGTTTGTGTATGCTTATAATCACATTAAAGTATTACCTATCAATTATTA EMBV3_01221 ATGGAGACCTTGAGGGATCTGGATCCCAGGCGGGGACCGAGTCCTGGTAGTCGCTGGGAT Gene BVT0101_019347 + 0 NULL GK000011.2:4252398-4280892 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026710 1 XLOC_015096 Coding TCONS_00026710 XLOC_015096 Coding Coding TSGA10 11:4172681-4266577 j TSS19111 3205 1 TCONS_00026710_4 820 19 0.966068480749774 2.24613953900796e-05 0.000111390721173484 1.7973285856625e-34 2.22823025039857e-36 3.34621589073687e-30 1.39161170036847e-79 2.34077099335907e-28 9.15428253342949e-21 2.42661501407561e-05 4.14783048795573e-57 8.01911739062122e-44 1.85515016285666e-05 6.98136898116731e-24 1.64472827786709e-05 4.82772183874926e-68 8.14490397827802e-25 4.18217899854529e-24 4.70948266132324e-12 5.03139667511274e-36 5.09287230545769e-48 2.44900791566866e-32 9.41843009003399e-12 4.32314465236887e-15 1.19983835026533e-26 2.42332405421615e-41 4.18415090248185e-35 6.00918370106755e-65 3.48171945680178e-05 1.0325684707363e-10 2.25731095738645e-25 XM_005193820.1 TSGA10 PREDICTED: Bos taurus testis specific, 10 (TSGA10), transcript 0.0 4414 100.00 0.763182527301092 XM_005264022.1 TSGA10 PREDICTED: Homo sapiens testis specific, 10 (TSGA10), transcript 0.0 3979 89.09 0.921060842433697 TCONS_00026710_4 sp|Q6NY15|TSG10_MOUSE TSG10_MOUSE Testis-specific gene 10 protein; 0.0 1354 96.85 0.848780487804878 0 coding 0 0 0 0 -0.0892457351119514 0.580864138654917 0.0179782135085759 0.774825638102842 GGGGCGGAGGATGGAGACCTTGAGGGATCTGGATCCCAGGCGGGGACCGAGTCCTGGTAGTCGCTGGGATGATCTCCGGGGAGGATGGCGGGCCAAAAAGCCCGGGGAGGGACCCACCGCCCCAGGTTACCACCAAAGAACATGATTTTGGTCTAGGGGCTCCAGTTTCTGAAGCTGAAAAATACCAGAATATTCTCCAGCTAGAGCAAGAAGTGAGAAATCAAGACAAATTCATCTCTACACTGAAATTACAGATTGAACTCATTTGCCAGCAAAATAATATAATAGTATTGGAAGACACAATAAAAAGGCTTAGATCTATAATTTTAGAGACTGAAAAAGCACAAAATAAATCTCCTTCCAGACTTGATTCCTTTGTCAAAACTTTAGAAGCAGACAGAGATTACTACAAGAGTGAAGCTCAAAATTTGAGAAAGATGATCAGAAGTAGATCTAAAAGCCCACGACGCCCATCTCCATCTTCTCGGGGTACAAACTGTGATGTAGAGCTTTTGAAGACAACAAGAGACCGTGAAGAACTCAAATGCATGCTGGAAAAATATGAGCGTCATTTGGCAGAAATTCAGGGTAATGTCAAGGTTCTCACGTCTGAGAGAGACAAGACCTTTCTTCTGTATGAGCAGGCACAGGAAGAAATTGCCCGACTTCGACGAGAAATGATGAAAAGCTGCAAGTCTCCTAAATCAACAACAGCACATGCTATCCTCCGGCGGGTGGAGACTGAGAGAGATGTGGCCTTCACTGACTTGCGAAGAATGACCACAGAACGAGATAGTCTGAGGGAGAGGCTAAAGATTGCCCAAGAGACAGCGTTTAATGAGAAGGCTCACTTGGAACAAAGGATAGAGGAGCTGGAGTGTACAGTTCATAACCTTGATGATGAACGTATGGAACAAATGTCAAATATGACTTTGATGAAGGAAACAATAACCACTGTGGAAAAAGAAATGAAATCACTAGCAAGAAAGGCGATGGATACTGAAAGTGAACTTGGCAGACAAAAAGCAGAGAATAATTCTTTGAGACTTTTATATGAAAACACAGAGAAAGATCTTTCTGATACTCAGCGACACCTTGCTAAGAAAAAGTATGAGCTACAGCTTACTCAGGAGAAAATTATGTGCTTGGATGAAAAAATTGATAATTTTACAAGACAAAGTATTGCCCAGAGAGAAGAAATCAGCATTCTTGGTGCAACCCTCAATGATTTGGCTAAAGAAAAGGAATGCCTGCAAGCATGTTTGGATAAAAAATCTGAGAATATTGCGTCCCTTGGAGAGAGTTTGGCAATGAAAGAAAAGACCATTTCAGGCATGAAGAATATCATTGCTGAGATGGAACAGGCATCAAGACAGTCTACTGAGGCCCTCATTATGTGCGAACAAGACATTTCCAGAATGCGCCGGCAGTTGGATGAGACAAATGATGAGCTGGCTCAAATAGCCAGGGAGAGGGACATCTTGGCTCATGAGAATGACAATCTCCAAGAACAGTTTGCTAAAGCTAAACAAGAAAACCAGGCACTGTCTAAGAAATTGAATGATACTCATAATGAACTTAGTGACATTAAGCAGAAAGTTCAAGACACTAATCTGGAGGTTAATAAACTGAAGAATATATTAAAGTCTGAAGAATCTGAGAACAGACAAATGATGGACCAACTCCGAAAAGCCAATGAAGATGCTGAAAATTGGGAAAATAAGGCCCGTCAAGCAGAGGCAGATAACAATACCCTCAAATTAGAACTAATCACTGCTGAGGCAGAGGGGAACAGGTTAAAAGAAAAAGTAGATGCCCTCAATAGAGAGGTCGAGCAGCACTTAAATGCAGAACGGTCTTACAAGTCCCAGATTGCTACTTTACACAAGTCTGTTGTAAAGATGGAAGAGGAGCTTCAGAAGGTTCAGTTTGAAAAAGTGTCTGCCCTTGCAGATTTGTCTTCCACAAGGGAACTTTGCATTAAACTTGACTCCAGCAAAGAACTTCTTAATCGACAGCTGGTTGCTAAAGATCAAGAGATAGAAATGATGGAGAATGAGTTGGATTCTGCTCGTTCTGAAATAGAACTCCTCAGGAGTCAGATGACAAATGAGAGAATCTCCATGCAGAATCTAGAAGCTTTGCTGGTGGCCAATAGAGACAAAGAATATCAGTCTCAGATAGCACTTCAGGAAAAAGAATCTGAAATTCAGCTTCTCAAAGAACACCTTTGTTTGGCAGAAAACAAAATGGCCATCCAGAGTAGGGATGTGGCCCAGTTCAGGAACGTCGTGACGCAACTGGAAGCTGACTTGGACATTACAAAGAGACAGCTAGGGACGGAGCGCTTTGAAAGGGAGAGGGCTGTGCAAGAACTCCGCCGCCAGAATTACTCAAGTAATGCTTATCATTTGAGTTCCACAATAAAGCCAAATACAAAATGTCACTCACCAGAACGTACTCACCATCGATCTCCTGACCGAGGCCTAGATCGATCATTAGAAGAGAATCTTTGCTATCGAGATTTCTGACACGTGGAAAGATTCTTCACATCCTTGGGAGAGGTCAAAGTTTCAAACTGATTTTTTTTGCTATATGATTGCATTTATCTTTTGAATGCTTGATAATGTTAAATGAATTTATTAACGTCGTGCCTCTGAATCTCTGTTTTCATGTGCCGTGCCATATCGCAGTGATCTGAGATGACTTATAAACACAAAAATGTATATGGCCCTTTCTATCCATACAGTAATAGTGAGTGTAAAATCTGCTTACTTCACTATTGACGACTGTTGTGTTAACTATCCGGAGTAAATAAAGAAGCTTATAAAAAGAGGGCAAAGTGTTTTAACAAAACTGATTTTTTTTCCTTTGTGATTTATGCTTTCATGGCTGGACAAATTGTGCCAAAAGAGGCGCAGTTTAGCACTCCTGGCCTGGGACCCCATATTCCATTTTGGAGCCAACCTGACACGAATTCCAGGCCATACTCTGACCCCAAAGCGGGATAGTAGGCGTGTGTCAGGGTTTTTAAATCCTTAGTGTTGTACCGTTAATTAGCATACATTTTCTACAATTGTTTACCCCTACTATTTTTAGAAAGGTAGGTAATACTATATCTGTCAAGAATGTAAGATTATTTTTTAAAAATCTGTATTTTTCATACGTTTTCCTTTAAAATATTAAAATACTGCAATCAACTTAA EMBV3_06731 CTTGAAAAACTCCACTAAGTGGCAGAATACCTATTGGATATTGGTTGCTGTATTTTGCTG Gene BVV0102_290485 + 1 EMBV3_12140 GK000022.2:32641675-32651391 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126651 TCONS_00126654 TCONS_00126658 TCONS_00126656 TCONS_00126652 TCONS_00126653 1 XLOC_077477 Coding TCONS_00126652 XLOC_077477 Coding Coding TMF1 22:32610042-32644223 j TSS94923 7133 1 TCONS_00126652_6 784 0.0513108089163045 16 0.791778818022235 0.000101532208420806 2.80183442666563e-05 1.58710688116431e-09 1.2736213935003e-08 0.000154893827961615 7.09681286261222e-06 2.45328769046463e-05 2.06762119117675e-05 5.71043827193403e-05 6.0415761140784e-15 3.99333586379238e-06 7.68987139236447e-78 2.51840139457909e-09 3.33518760739743e-06 4.04788546558938e-05 0.000374125115848795 9.21226368943937e-18 6.9690866868533e-05 8.11954344729691e-05 4.44721155635434e-05 1.87207034041215e-05 3.06786748998096e-05 0.000108784349091655 2.93856887601125e-05 9.81427267946967e-05 4.12656713148075e-05 3.97272350281692e-05 2.26230617155894e-54 4.63631246679639e-40 3.21053183408624e-05 NM_001206260.1 TMF1 Bos taurus TATA element modulatory factor 1 (TMF1), mRNA. 0.0 4396 100.00 0.341511285574092 NM_007114.2 TMF1 Homo sapiens TATA element modulatory factor 1 (TMF1), mRNA. 0.0 3294 88.96 0.351885602130941 TCONS_00126652_6 sp|P82094|TMF1_HUMAN TMF1_HUMAN TATA element modulatory factor; 0.0 1312 90.78 0.951530612244898 1 coding 0 0 1 0 -0.06964250670498 0.702157615236705 -0.0100100757045468 0.862238192497712 AGGCCGAGTTAACACAACTGTTTAAATATTTGAGAGAAGGCTTTATGAAAGAAATGCCATAGCCAACTTCCCTATTTTTAATGGCAATGCGCTAGCTCTTAGTACGAGAGCTGTTTTACAGGAAGGAACCCACTTGAAAAAACCTGCCTATTCCTCCCTAAGGCATCAGTCTCTGCTGGTTTAGCCACAGAGTTTATCCCGGGGCGAAGAATTTTCGCTGTACGCCTGGAACCAGTTTCAATACGAAGCGTTCCGCGTTCCTCGGTAACTATAGGCGAGCCTGCATTCCCGGAAGTGACGTCAACATTCTTCAGTTCTTCCGTCTATGGGCGGAACTCCGGGCTCCCGGAGTTGCTGGTTGTGTACGTGGAAGCAGCCAGCGCCTGCGCAGTTGGACCTGTCGTCTCAGCTGTGTGGGAAGCGGCGAGGGTAACATCTCGGGCTCGGGGGAGATCTTCGGGGTCATGGTTTCCCACTGACAGGGCCCGCCGAGTGGAGAAGCAGGCGAGGCTCTCCGTGCACCTTCCCCCGGGCCCCCGACCGTCGGCCTTTCCCTTGGCCTTCCCGCTCGGTGCTGCCGCTGCCACCGCCGCCAACGCCGGCGGTTGAGGAAGGGAGATGAGCTGGTTCAACGCCTCCCAGCTTTCCAGCTTCGCCAAGCAGGCCCTGTCTCAGGCCCAGAAGTCCATCGACAGGGTCCTGGACATCCAGGAAGAGGAGCCGAGCGCTTGGGCCGAGACCATTCCGTACGGAGAGCCAGGAATAAGTCCCCCTGTCAGTGGAGGATGGGATACTTCAACCTGGGGGTTAAAATCCAACACTGAACCTCAGAGTCAGCCAGTAGTCTCTCCTAAAGCAATTACAAAGCCAGTTCGGAGAACTGTGGTAGATGAATCTGAAAATTTCTTCAGTGCCTTTCTCTCTCCAGCTGATGTACAGACCATTCAGAAGAGTCCAGTGGTATCAAAACCACCAGCTAAATCACAGCGACCAGAAGAAGAAGTGAAAAGCACCTTACAGGAGTCCTTGCACACTGGACAGTCAAGAACAACTGAAGCCACTGAGTCAAAAGTAAAGGACTCTCCTCCATGTGTATCCAAGGAAACTCTGGCAGTCAGTACTCTGTCACCTAAAACTGAGGATAAGCACGAAGAAACTGTTACTAAAGAATCTGATACGAAGGTGCCAACAGTGCATTTGAAAGTATCTGAAAGTGTTATGAATGTGAAAACAACTAGGGAAAATGTATCTAATATGTCTACACAGCCTCTCACAGCAGAAACCAAGGACATGGCTTTGGAACCTAAGGAACAAAAACATGAAGACCGACAGAGCAATACACCTTCTCCTCCTGTTAGTACCTTCTCGTCAGGTACTTCTACCACTAGTGATATTGAAGTTTTAGATCATGAAAGTGTAATAAGTGAGAGCTCAGCAAGTTCTAGACAAGAGCATACAGATTCAAAATCAAGCTTGCACTTGATGCAGACATCCTTTCAGCTTCTCTCAGCATCTGCTTGTCCTGAATATAATCGTTTAGATGATTTCCAAAAACTCACTGAGAGTTGCTGCTCATCTGATGCTTTTGAAAGAATAGACTCATTTAGTGTACAGTCATTAGATAGCCGTAGTGTCAGCGAAATCAATTCAGATGATGAACTGTCAGGCAAGGGATATGCTCTAGTACCTATTATACTTAATTCTTCAACTCCAAAGACCAAAACAATTGAATCTGTTGAAGGAAAACCTGAAGAAGCAAATGAAACATTAATTATGCCCAATGAGGAAACAGAAATGGAAGAAAGTGGACGAAGTGCAACTCCTGTTAACTGCGAACAGCCTGATATCTTGGTTTCTTCCACATCAGTAAATGAAGGACATGCTGTCTTGGCTGAGGAGGCTGAGCAGCCTGAAGCTTCAAGTCAGCCAGAGGCACCTTCTGAGAAGGAAGATGTCTGCAAGACAGTTGAATTTCTGAATGAGAAACTGGATAAAAGGGAAGCTCAGTTATTATCTCTTAGTAAAGAAAAAGCACTTCTAGAAGAAGCTTATGATAATCTGAAAGATGAAATGATCAGAGTGAAAGAAGAGAGCAGCAGTATTTCTTCCTTGAAAGATGAGTTTACTCAAAGAATTGCAGAAGCGGAAAAGAAAGTTCAGCTAGCCTGCAAAGAGAGAGATGCTGCTAAAAAGGAAATCAAAAGTATAAAAGAAGAACTTGCTACTAGATTAAATAGTAGTGAAACGGCAGACCTTTTGAAAGAGAAAGATGAGCAGATCCGAGGGTTGATGGAAGAAGGAGAGAAACTTTCAAAACAGCAGCTGCATAATTCTAACATCATTAAGAAATTAAGAACTAAAGACAAAGAAAATGAAAATATTATTGCAAAGCTGAACAAAAAAGTTCAAGAGCTTGAAGAAGAGTTACAACATTTAAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGAAACAACATAGAGAAAATATTAAGAAACTAAATTCTGTGGTAGAACGCCAAGAGAAGGACCTTGGTCGACTTCACATAGACATTAATGAACTTGAAGAAAAGAACCGAAGTATTCAGGCTGCTCTTGATAGTGCATACAAAGAGCTTACTGATCTCCACAAAGCCAATGCTGCAAAGGATAGTGAGGCCCAGGAAGCTGCTCTGAGTCGTGAAATGAGAGCTAAAGAAGAACTTTCTGCAGCACTGGAGAAGGCCCAAGAAGAAGCCCGTCAGCAGCAGGAAACATTAGCAATTCAAGTGGGGGACCTTAGGCTGGCACTGCAACGTGCAGAGCAAACAGCTGCCAGAAAAGAGGATTATTTACGCCATGAGATCAGTGAACTCCAGCAGGTGAATCCCAGACCTTGTTGGCAGCAGCAGTTGAGAGAGAACGTGCGGCCACAGAAGAACTTCTTGCTAACAAAATTCAAATGTCTTCCATGGAGTCACAGAATTCTCTCTTAAGACAAGAAAATAGTAGATTTCAGGCTCAGCTAGAATCAGAGAAAAATAGGCTAAGAAAACTAGAGGATGAAAATAATAGGTACCAGGTTGAATTAGAAAACCTAAAGGATGAATATGTAAGAACAGTTGAAGAGACAAGGAAAGAAAAGACACTGTTGAATAGTCAGTTAGAAATGGAGAAAATGAAAGTTGAACAAGAAAGGAAGAAAGCAATTTTCACTCAAGAAGCAGTAAAAGAAAAGGAGCGGAAACCGTTTTCTGTTTCTAGCACTCCTACAATATCACGTTCAAGTTCAATAAGTGGAGTTGATATGGCAGGCCTACAGACATCTTTTCTGTCTCAGGATGAGCCTCATGATCACTCATTTGGACCAATGTCTGGGTCAGCAAATGGAAGCAATCTTTATGATGCTGTAAGGATGGGAGCGGGATCAAGCATTATTGAAAATCTACAGTCTCAGCTGAAGCTAAGGGAAGGAGAAATTTCTCATTTACAGCTAGAAATTGGCAATCTAGAAAAAACACGCTCCATAATGGCTGAAGAGCTAGTTAAATTAACAAATCAAAATGATGAACTTGAAGAGAAAGTGAAGGAGATACCCAAACTTCGAATGCAGCTAAGGGATTTGGATCAAAGATACAACACTATTCTGCAGATGTATGGAGAAAAAGCAGAAGAGGCAGAAGAACTTAGATTAGATCTTGAAGATGTAAAAAATATGTATAAGACTCAAATAGATGAACTTCTAAGACAAAGGCTCAGTTAACTTCTGCAAATTACATTCCCATCAAACTGAATGTAAACATTTAATATCTACGTGCAGATATCCAATAAATTCTTTTATAGAATTAGAAGGTGGAATTTACTGTAGTGTTAAAAAATTGAAAAAATTCTTTTATAGTGTATAGTAATATTTCCAGTTAAATTATTTTGTGCAATATTTGAACTTTATTTTTAAAACTATTCTTTAAAAGATTTATTTTTTAAAAGGTCTTTTTTTTTTTTTGCCTTGAATAGCACAGAGATTTATTACTTTATCCTCATATCAGTATGGTTAGAGAAGGAGAATGGTTCATATGTTGTATTGTAGATATATAACTAATTGTATCTATAATTTATATGTTTTTGTATATATTGAGAACATTTAAAGAGTTATAGTAACGTTGACACTTTGAAATCTTTCGCACTTAAATCTTCAATATATCTTAATTGTGATTCATGAAAATGGACATTGTTTTCAAGTAAAAAAATTACTAAATCTGCAGTTATTAAAGTTTTGAAATAATTTTTTTTCTTTAAAAAAAGTCTCTGAAGTTTAAAAGGTAAATAATTAAAACTTACAAATTTTTGTGATCTCAAGTTTTATTTCAGTCAGATTTCACAATTAAGTCTGTACAAACTTTGGTACCTATTTGGAGAAAGTTGTAGCTATTCAAAGTTATCTAGGCATAATTGAATAGTGGAAAAATCTACTTTAAAAGATTTTGTGATAACTTCATTAACATTTTAGTGGTTTTTGAAGAGGTATTGTTTTACTACCCTATAAAACGAATCAAAAGAAATAAAATTACTAATGTAATTTTCTTTTTAATTGTTCACATTTTGTAAAGTCTTATTTTTGGCACATTAAAAGTAAATGTTGACATTCATAATAATATTCATAACAAAATAGAGAAATTATAGGAGTTAAATTTGACATTTTGCAGTTTTCTGCAGTTTATCATTTAATTTTTTTCTTGGACCTTTAAAATAAAAAACTAATAGCTGAAAAAATAGCTATTCCTTCTCAGCTGTGTTTTAGACTTGTGAAATATTTTGATAGATTTTATTACTTAAAGTCATTTAGATGCCTTTACTTGAAAATAAGAACTCTGACTTAGTTTTTAGTTACATTTTAAACACTAGAACTTTAGAGTATAGCTAGAAGTAAGCCATGCTGAAGATTGTGGAATGCTTTTCAGGGCAATTCAAGTGACCTCATTTTTGTTCTTTTTGGATTCAAGACAGTATTTCTGTCATTGGATCTCTGATTTGTAGCATTAATAAATATTCTGTCAGTGTGAGCCAAATTCATGACATTAATTTTCTATATTTTAGCAGTAAAAAGCAGTAAAATAGCTTTTCTTTTTTTTTAATTATTATTAATATTAAGGGGTTGACAGAATAACAAAATTGATAGCAATAGGAAATTTACAAAATTAGAAAATACGGGAAATACAACTTGCAAAATTCTATCAAGTTTTTGAAATCAGAAGTTTAGGGATTATGAAATTGTTCTTTTATGGTATCCATTAATGAAGAGGGGAAAAAAACCTTCAGTGGAGAAAAGATTGAGATAAAATTGCTTTACTTTTTAATTTTATAATATTAAACATTCTCTTTTCTTAATCCTTATTAATAAAATCAATTCAACTTAAAATTTTATGGTGTTTTTAGTTTAATTTAAAAATGGCAGCAGCTATTTAAGTCTTTGACTGTATATTACCATATATTGTTCTTTATCCACAAATTAATAGCTGATATTTATACTGAGTTTGTTTCATTATATGTTTAGATTTTTCAATACATCTATAAATTGAGAAACTGTACCAATTGCTTTCTTGAAAAACTCCACTAAGTGGCAGAATACCTATTGGATATTGGTTGCTGTATTTTGCTGTTTGTCATTAAAAATTATCTATCCATATTCTAGAAAATATTTGTATTTTAATAGATAAGAAAATAGTTTGCAGTCAGATGTTTCCATTCTTGAAAGAAAATAGATAATACAAATCATAACAATGTTAAGAATATTAAAAAAAAGAGTAAAAGGTATGAACATTGTCGTTTCCATATAGACAAGTAAGCACAGATTGTGGGCATCCTTCTAACTCTTGGGAAGCTAAATTGAGAGTGCCATTTCTTTCTTTTTCTTTGCCTCTTTTTAGAGAACTTCCAGTTGTATAGTGTGTAGCATGTGGGGATGCATCAAATCTTTGATTTTTAAGATATTCTAAATATGGGAAATTTCTGACCTAGGGAAACATGTAGTTTAAGTAAGTAAAAAGAAAAGTTCAGGAAAATTTTTCTCTTATAATCCTTCATTTGGCACTTATTAATTGAAAATTTAAATAATTTAAAAGTATATGATTTATAATATATAGAAAATAGACACTAGAAAAATAGAAAATGACTATAGATACTTTATCTTGTTTTACTATTCTTTGTTTAGTATGTGTACATGTATGTTCTAATGTATCATAATTTTTCATTTTCATTTGAGTCTAATTTCCCTAATTTTGTTCAGTTTTAAAATATAACAACTTTAACTTCATATTTTGTAAAGGGCTAAAAGTATGATTTAAAACTACTTGATATTATATTTTAATTGATACTATATTTTAATTCTAAATGAAAGATAATGTAAATAAGCATGATTCTGATTTGAATAAAGATTTTAAAGTAGTAATAATGTATTTCATTTTTAACATGATTTAGAGTGGTCAGTATCAATGAGTGAAGACAGTTCTGTTTTATGAAGATAGATGACTATATAACTTTGAAATTTTTATTTTAAGAAAATGAGGGTAAGTCCAGATTTTTTATGAGTTATTTTACTCAGAGTTTTATAAGAATTCAGCATAGTTTTCCTAATTAAGATATGTTTTTGGAAAATATAATTGTAAGAATTTACCTTCTTGTATAATTACTGTAAGGATGATTTGTGTCTTTTTAAGGTCTTAAACTGTATCAAGATATTTTTCTAAAAGTCTTTAAAATATTTTTGTATTCAAATAACAGATATAACCAGTATCAGTTTAGTCAGTCGTGTCCGACTCTTTGCGACCCCCTGAACGCCAGGCCTCCCTGTCCACCACCAACTCCCGGAGTTTACCCAAACTCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCTCTCAATCTTTCCCAGCCATTAGGGTCTTTTCAAATGAGTCAGCTTTTCACATCAGGTGGCCAAAGTATTGGAGTTGCAGCTTCAACATTGGTCTTTCCAATGAATATTCAGGACTGATCTCCTTTAGGATGGACTGGTTTAATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTTTTCTCCAACACCACAGTTCAAAAGCATCAATTCCTCGG EMBV3_06963 CATTTGCGTCTGGCTCCTCAGCAAAGGCGAAGGAGGAAACATGACAGAGGCTTCATCTGC Gene GeneID:508245|RNASET2:XM_002690391:14_cdna Constitutive 0 NULL GeneID:508245 9 GENE RNASET2 NULL ribonuclease T2 EMBV3_06287 TGGCAGGAGGGAGAAAAAGTGTTAAAACGGTTTCTAATGAAGTCAGAGATTTAAACGATG Gene GeneID:540462|AKTIP:XM_002694780:583_cdna Constitutive 1 NULL GeneID:540462 18 GENE AKTIP FTS MGC133931 AKT interacting protein EMBV3_41963 ATGCCTACAGCGACAACAGTCTGGACCCTGATGACGAGGACAGCGATTACCACCAGGAGT Variant GeneID:508531|MLX:NM_001035061:88_cdna 104^193 1 EMBV3_30471 GeneID:508531 19 GENE MLX MGC127128 MAX-like protein X EMBV3_41569 TGATCACCTTCCACATCTCGAGCAAAAAATCAAGCACAAGAACGGACTCCCACCGGCTGG Gene GeneID:513710|CPT1C:XM_002695120:613_cdna Constitutive 0 NULL GeneID:513710 18 GENE CPT1C NULL carnitine palmitoyltransferase 1C EMBV3_30482 TATTCCCCAAACTTACAATGTGAGAGAAATTTATCAATCAGTATAGGCAAAAGTTGGGAG Gene GeneID:507632|YES1:NM_001101060:59_cdna Constitutive 2 NULL GeneID:507632 24 GENE YES1 NULL v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 EMBV3_31856 CGGCGTTACATTTCCTCCTTAGATCGCGTTCCACCACAAACCACATCACAACTCTCCCAA Gene BVV0102_156697 - 1 EMBV3_00588 GK000002.2:132058682-132097561 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17895 CTGGCTTAGGAAGATCGCCTGAGGAAGGATATGGCAACTCACTCTAGTACTGTTACCTGG Gene BVT0102_126639 + 0 NULL GK000025.2:26855547-26866846 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00148836 1 XLOC_090716 NonCoding TCONS_00148836 XLOC_090716 NonCoding NonCoding - 25:26863806-26864276 - TSS111371 470 1 TCONS_00148836_1 38 0.425531914893617 1 0 0 0 0 0 0 0 0 0 0.000184662816951823 0 0 0 0 0 0.000114825780843432 0.000224779497953841 0 0 0 0 0 0 0 0 0 0 0 2.04365440751753e-05 0 0 XM_870793.6 FAM101B PREDICTED: Bos taurus family with sequence similarity 101, member B (FAM101B), partial mRNA. 6e-44 181 81.13 0.442553191489362 0 noncoding GAAGTCATAGAAAGGCTACTGGGCTAGAGTTCAGTGAGAAAGGCAGTGAGTGTGCAGTGAGATAAAGTGTCTTGAGATGAGGCAGGGGTTTTGTGGAAAGTAATTTGAGAGCTTTGAGCTCTGAGAAAACCTGATTGAATTTATCCATTTATTGTTGATACATTACATTTTGTTTATTTTTGGCTAGAGTTGATAACTGCCTCAGTTTTTTTTTTTTTTTTAATTTGCTAATTTTCTATGTTGTTGCTGTCGTTTAGTTGCTCAGTTGAGCCTGACTCTTTTGTGACCCCACGGACTGCAGCCTGATGGGTGCCTCTGTCCATGGGATCTCCAGGTAACAGTACTAGAGTGAGTTGCCATATCCTTCTTCAGGCGATCTTCCTAAGCCAGGGATTGAACCTGAGTTGCCTGCATTGCAGATGGATTCTTTACTGCTGAGCCACTGGAGAAGCCCCAATTTCCTATGTAAT TCONS_00146707 . 3' 2571 TCONS_00146707 . 3' 3040 EMBV3_32573 TATGCACTGTGTAGGTCTTCATCAACGTCCCATCTGGGGCATAATATACAGAATACAGCT Gene BVV0102_128203 + 0 NULL GK000002.2:32852429-33459443 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108609 1 XLOC_064514 NonCoding TCONS_00108609 XLOC_064514 NonCoding NonCoding - 2:32857198-32857679 - TSS80230 481 1 TCONS_00108609_1 50 1 0 0 0 0 0 0 0 7.27447862253319e-05 0 1.64036129782132e-05 0 0 0 0 0 0 0.000109819486975363 0 0 0 0 0 0.000694240845955827 5.72185757814382e-05 6.97075577776346e-05 0 0 0 0 0 0 NM_021716.5 Fign Mus musculus fidgetin (Fign), transcript variant 1, mRNA. 3e-162 574 87.13 0.960498960498961 0 noncoding 0 0 0 0 0.0193717119719835 0.912540961429636 0.0106580594027285 0.829050361069279 TATTCATTTCTATTTTTTTTCTTTTTTCATCTGACGTATATTCAAACATTGTTCTTTATAACCATTTCTACCTCATTGCTACATATTGTACATGTAGTATTTATTTGTTGTCTTTTTTTGAATGTCATGCATTTCGTAAGAAAAAGACTTGTCCTTGAACTTGAACAGTCTACCTCAGAAAGACTGTCTTTACACTGAACAGTATTAGCAACCTGAACGATAAGACGCATTAGCGAAGTGTGGCAGGGTAGATAATGCGCGAGTACTTGGGATATTGATGGACTTTTAATTGTACTCATAACACAAGACTGCTTAAAAGAACTTAAATTATGCACTGTGTAGGTCTTCATCAACGTCCCATCTGGGGCATAATATACAGAATACAGCTTTATTTTTATGTGCCCATCTCTGAGAAATGTGTAAGCATTCTCAAGTATTTTACACTGGCAATCTGGCTACTTAAACTAAAACATTTTTATAT TCONS_00102124 TCONS_00102125 TCONS_00102128 TCONS_00102129 TCONS_00102130 TCONS_00102131 TCONS_00102132 TCONS_00102133 . 3' 2202 TCONS_00102124 TCONS_00102125 TCONS_00102128 TCONS_00102129 TCONS_00102130 TCONS_00102131 TCONS_00102132 TCONS_00102133 . 3' 2682 EMBV3_26954 ATCCAAGAGTCTATGTTTCCAGATATTCTCATATCCACCCGTCTCTCCGGTCTTGCCCGC Gene BVT0102_420494 + 0 NULL GK000005.2:26503714-26529691 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198142 1 XLOC_119799 NonCoding TCONS_00198142 XLOC_119799 NonCoding NonCoding - 5:26516054-26516476 - TSS147710 422 2 TCONS_00198142_2 37 1 0 0.000193445957567883 0 0 0 0 0 0 0 0 0 0 0 9.51893226270648e-05 1.11469203283889e-05 0 0 0 0 3.3985396524003e-05 0 0 0 0 0 0 0 0.00044429593136468 0 0 0 XM_005198231.1 LOC101909679 PREDICTED: Bos taurus uncharacterized LOC101909679 (LOC101909679), 2e-113 412 100.00 0.537914691943128 0 noncoding GAGCTTGCAGGTTTCAGTGCAGTAAGCCACAGGTCCACGTAGCAGAGAAGGCGCTGAGAGTCCCCTGTCATTCTCATTTCCATACAGGTGGCCGTCAGCCAATGAAAACTTAGGATGCGCTCACCACCAGCAGCCAATCCCAGTGAAGGATGAGCCGAACTGCCAGGCCTAATTGCATCTTGATTGGTTGTGATGTTGCTAGGCAGAAATGAGGTCCCGGAGATCGCTGCGGGCAAGACCGGAGAGACAGGTGGATATGAGAATATCTGGAAACATAGACTCTTGGATTGTCATTTTTCTTCCTGAGCTCCTTCATTCTTAAAGGATTAATGGGGTCAGGGGAATCACTCTTCCTTTTCTCCTCCACAGTGGGACAGAGCCAAATAGTTACCGTTTCCCCAAAACGCCTTCAGAGAAATCTG TCONS_00191165 TCONS_00191166 TCONS_00191168 TCONS_00191169 . 3' 11587 TCONS_00191165 TCONS_00191166 TCONS_00191168 TCONS_00191169 . 3' 12008 EMBV3_29845 CCCTAAAAAGGGCTCTAAAAAAGCTGTGACCAAGGCCCAGAAGAAGGACGGCAAGAAGCG Gene GeneID:512612|LOC512612:XM_002699033:47_cdna Constitutive 0 NULL GeneID:512612 29 GENE LOC512612 NULL similar to histone H2B EMBV3_30019 CCTTCCGGGTGCAGTTCAACAAAAGGGCGGATCTTTCTTACTGTCACGGCAGAACTGAAC Variant GeneID:515051|DTX3L:XM_002684793:145_cdna 191^396 1 EMBV3_23391 GeneID:515051 1 GENE DTX3L NULL deltex 3-like (Drosophila) EMBV3_12237 TATCCAGGTAAAGAGGCAAGATGGCACTATGAGGGTTGTCTGTCCCCTAGCTTTAAGGGA Gene BVV0102_234236 - 1 EMBV3_43632 GK000001.2:46863233-47006664 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23190 GTTGATCTGTGTAAAAGCTTTGAAAACCAGAGGCGAAGATCTGCAGAAGATGAGTTGGCC Variant GeneID:615712|EXOSC2:NM_001046561:202_cdna 246^381 2 EMBV3_21494 GeneID:615712 11 GENE EXOSC2 MGC137660 exosome component 2 EMBV3_41617 ATATGCCCTCTCCCCGGGGGAGCACCCCCAAGGTGGGGAAGGCAGGTGTGGAGCTCCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01971 GCCATTGTCCAGGTAACGTCTGTGTTTGGCCTGCCCTTCTGTGATGCCTTTGTCATCTCT Gene GeneID:504688|LOC504688:XM_002685876:33_cdna Constitutive 0 NULL GeneID:504688 3 GENE LOC504688 NULL similar to olfactory receptor 218 EMBV3_07376 AATGCGCTGATGACAGGATAGTGGGCTGGACTGCAAGGATCCGATGGTGCCTTCCTGGAT Gene GeneID:100295785|LOC100295785:XM_002683711:2_cdna Constitutive 0 NULL GeneID:100295785 9 GENE LOC100295785 NULL hypothetical protein LOC100295785 EMBV3_00384 GAATAAGCATCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCCA Gene GeneID:533609|ACOT11:NM_001103275:82_cdna Constitutive 2 NULL GeneID:533609 3 GENE ACOT11 MGC166303 acyl-CoA thioesterase 11 EMBV3_13012 GCGCCTGGTCAAGTGCGTCAACACCCAGACCGGGCTGCCTGAGGAAGACAGCGATCTGTG Gene GeneID:504694|LOC504694:XR_084635:273_cdna Constitutive 0 NULL GeneID:504694 21 PSEUDO LOC504694 NULL similar to ADAM metallopeptidase with thrombospondin type 1 motif, 7 EMBV3_37933 TTGAGTTTGGGTGAATCCTGGGAGTTGGTGATGGACAGGGAGGCCTCGTGTACCGCAATT Gene GeneID:512527|CWC25:NM_001105359:97_cdna UTR3_Alt 2 NULL GeneID:512527 19 GENE CWC25 CCDC49 MGC143049 CWC25 spliceosome-associated protein homolog (S. cerevisiae) EMBV3_03060 AGGGCTCTCACCCAAACGATGATTCTAGCGCTCCCCACAAAATCCAGGAAGCTCTCAAGT Gene GeneID:505866|CSPG5:NM_001075229:91_cdna Constitutive 0 NULL GeneID:505866 22 GENE CSPG5 MGC140604 chondroitin sulfate proteoglycan 5 (neuroglycan C) EMBV3_28681 TGCTTTCACCTAAACCTCTGACTTTACGGGGGGCTCTCCCCCACTACCTCTCTCTGAAAA Gene BVV0101_075315 + 1 EMBV3_05705 GK000025.2:33339-93788 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219194 TCONS_00218607 TCONS_00247212 TCONS_00098956 TCONS_00204180 TCONS_00132809 TCONS_00120346 TCONS_00091893 TCONS_00142959 TCONS_00071024 TCONS_00180616 TCONS_00177173 TCONS_00242271 TCONS_00206254 TCONS_00066112 TCONS_00166670 TCONS_00174930 TCONS_00196907 TCONS_00174931 TCONS_00242573 TCONS_00224160 TCONS_00206255 20 XLOC_132513 XLOC_131927 XLOC_151269 XLOC_059200 XLOC_124364 XLOC_080882 XLOC_073143 XLOC_056664 XLOC_087384 XLOC_042797 XLOC_110383 XLOC_106947 XLOC_148935 XLOC_124865 XLOC_040830 XLOC_101506 XLOC_104738 XLOC_118572 XLOC_149236 XLOC_137456 Coding TCONS_00132809 XLOC_080882 Coding Coding LOC615257 23:26688280-26690858 = TSS99285 1852 1 TCONS_00132809_3 245 0.25 3 0.282499029879705 0.000230189861376876 8.40986065803822e-05 9.82696984830033e-05 7.17421206484414e-05 0.000122629766048199 0.000119750247863656 8.65939013962548e-05 0.0001628778919652 0.000428163647505044 0.000837560635200307 0.000443333722593521 0.000637781019621108 0.000148731666861576 0.000870357288072111 0.00040030720342554 0.00429972551649751 0.00150753438400499 0.00344119198991495 7.35677772506258e-05 0.000309349840721391 7.34891233802112e-05 0.00166384186288598 0.00175439660919951 0.00242824707230381 0.000118467549760973 0.000261225411348455 0.000285259164908161 0.00142582211898723 0.00143405661643216 0.00137997367182381 XM_002697375.3 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 0.0 2522 100.00 0.754319654427646 NM_001732.2 BTN1A1 Homo sapiens butyrophilin, subfamily 1, member A1 (BTN1A1), mRNA. 4e-09 68.0 65.49 0.179805615550756 TCONS_00132809_3 sp|P18892|BT1A1_BOVIN BT1A1_BOVIN Butyrophilin subfamily 1 member A1; 2e-57 194 51.40 0.726530612244898 2 noncoding 0 0 0 0 -0.0487859337043163 0.741666882883467 0.025132913440539 0.618495538823466 TCTATCTTGAGTCTTGTCTCTAGTGCAGTAGGATAGGATGGGAAAACAAAATAAAAATGTCTGTAGTCAGCAAAGAAGAATTTCTAACACTACCTTCTAAATTCTGTAATTTCAGTGAATTGTCTTTGAAGGGTAAATGATGAGTGATTCAGCATATTTTTTCTCCTTTCTTCCTTTCTTCCTTCTCATCTTTACTTAATCTTCCTCACCCTCCTCCAATATCCTTCTGATCTTTTGTTGCTGCTTTATTTCTACCTTTCCTACACCTGACCACTTTTATTTTCATGTTTGAAAAAAACAGAATATGAAGATAATACAGGATAGAAAGAGAAAGCCCAAGGGATTCAAAACAAGAAAGGGAATAAAGAAAACAGAAAAAGAAAACAATAGTAAGAGAAATCTGGTAAGGAAAAAAAAGGTAAAGGGTTTCCTATTTTGTTCTTTTGCAGCCTGGAGGAATGTACCATTATACCCTGATTGGAGGAAAGAAGAATTCAAAGCTGTAAATATGACCCTGGATGCAGCCACTGCTCATCCTGCCCTCCTCCTGTCTGAAGAAGGGAGACAAGTTTCCTGGCAAGAAAGATGTCAAGAAATTCCCAGCTCCTCAGAGAGATTCAGCTCCATTCCCTGTGTGCTGGGTCAATTGTGCATCATCTCAGGGAGATACTCCTGGGACATAGAGGTTGGGGACGCCTGTTCCTGGGACCTGGGAGTTTGTAGGGATAATGTAACAAGGAAGGGTAGGGTCACAATGTCCCCAAAGAATGGTTTCTGGGCCATTAGGTTCTATGAGGGGGAGTATTGGGCCCTCACCTCCCCAGAAACCCCTCTTATTCTAAGAGAAAAACCCGTTATTGTGAGGGTATTTCTGGATTATGAATCTGGAGATGTATCTTTCTATAATATGACAGATGAATCCCACATCTTCACCTTTCCCCAGAACCCATTCTATGGTGTCCTAAAACCACTTTTCAGACTTTGGTCCTCTGAGTCAGGCTCCCTAACCATCTGTGTAGGTGAAGAATGTGCGATGTTGTAATTCATATGTCTACCCCACTCCATGAGAAATGATTACTTTGATCCCCGATGAAAATCACAATTCTCCCCCAATGAGATACAAATAGATATTTTTCTTATTCCTTACTTGTTCATTCTCAAGATGAAGCTCTGGACACAGACTGATGATTGCCTCATATCAATTCCCCCTTCCTCTTTATTTTATCCTTCTTTATTTATTTATCCTTCTTAAATCTTCTTTATTTATCCTTATTATTATACTTTCCTATGACAGCTAATATAATATAAATATTAGATTTCCTTATCTCTCTACTGAAAGTGAATAAATGATGATGCTGTATATCAGCTGAATTATAAGGATGTGTCCTTAAAGGTAAATTGTGCGTTTCTATTCTTCTTTACTTTCTGCTGACTGTAATATATCATGATGGCTAGAACTCTGTGGGGAGTGAGCTCCTCCCGTGCCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGTGGGATCAAGCCTCAGGAGTCCCCCTGGAAATTCTCGAGCATCTACCCCCAAAACCAAAGTCTGCCTACTTTCTGCCTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTCTGAAAAAAGAGTTAGCTTACAGCTCCAGTTAACAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCTTTGGAAATCCTCTAGCCTGCCTGAATAGGTTTTTCCAGCCACATGTGATTGCTCAGAGCCTCCCAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTTA EMBV3_14246 GCCGTCACCCAACAAGTGGAGTCCCCCTAAATCTGTGACAAAACCAGTTGCCAAAGAAAG Gene GeneID:536811|JPH1:XM_002692704:112_cdna UTR3_Alt 2 NULL GeneID:536811 14 GENE JPH1 NULL junctophilin 1 EMBV3_24963 TATCTCTTGGAGCTCACTGGGTGGACTAAAGGGAGTCAAGCCTCCTGAGGCGTTTGGAGA Gene BVV0102_371455 - 0 NULL GK000019.2:1-77874 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00063810 TCONS_00178732 TCONS_00218950 TCONS_00206816 TCONS_00123275 TCONS_00063805 TCONS_00230831 TCONS_00117596 TCONS_00167122 TCONS_00230834 TCONS_00186490 TCONS_00098199 TCONS_00162739 TCONS_00240374 TCONS_00098198 TCONS_00222139 TCONS_00185573 TCONS_00149043 TCONS_00161424 TCONS_00116087 TCONS_00101341 TCONS_00111145 TCONS_00088422 TCONS_00222116 TCONS_00106013 TCONS_00238290 TCONS_00006023 TCONS_00048460 TCONS_00080098 TCONS_00178733 TCONS_00238291 TCONS_00223049 TCONS_00231769 TCONS_00033186 TCONS_00217532 TCONS_00207410 TCONS_00230833 TCONS_00011614 TCONS_00010443 TCONS_00222183 TCONS_00178734 TCONS_00162571 TCONS_00142474 TCONS_00230354 TCONS_00010832 TCONS_00217533 TCONS_00168478 TCONS_00142472 TCONS_00129561 TCONS_00231774 TCONS_00255144 TCONS_00157807 TCONS_00066112 TCONS_00176791 TCONS_00167922 TCONS_00157808 TCONS_00071703 TCONS_00238280 TCONS_00131535 TCONS_00011615 TCONS_00232767 TCONS_00162567 TCONS_00098201 TCONS_00162570 TCONS_00071451 TCONS_00158314 TCONS_00186834 TCONS_00154284 TCONS_00033205 TCONS_00230832 TCONS_00231776 TCONS_00063811 TCONS_00212984 TCONS_00222175 74 XLOC_090921 XLOC_038536 XLOC_108505 XLOC_132269 XLOC_125336 XLOC_074829 XLOC_038531 XLOC_140321 XLOC_071762 XLOC_101958 XLOC_140324 XLOC_112542 XLOC_058445 XLOC_099620 XLOC_147038 XLOC_058444 XLOC_135448 XLOC_111626 XLOC_090920 XLOC_098315 XLOC_070256 XLOC_061582 XLOC_067045 XLOC_053209 XLOC_135425 XLOC_062697 XLOC_144957 XLOC_001586 XLOC_028592 XLOC_048982 XLOC_108506 XLOC_144958 XLOC_136355 XLOC_141257 XLOC_019420 XLOC_131531 XLOC_125926 XLOC_140323 XLOC_007165 XLOC_005994 XLOC_135492 XLOC_108507 XLOC_099452 XLOC_086899 XLOC_139844 XLOC_006383 XLOC_103118 XLOC_086897 XLOC_078274 XLOC_141262 XLOC_158076 XLOC_096262 XLOC_040830 XLOC_106565 XLOC_102758 XLOC_096263 XLOC_043473 XLOC_144947 XLOC_080240 XLOC_007166 XLOC_142251 XLOC_099448 XLOC_058447 XLOC_099451 XLOC_043222 XLOC_096768 XLOC_112885 XLOC_094044 XLOC_019439 XLOC_140322 XLOC_141264 XLOC_038537 XLOC_130301 XLOC_135484 Coding TCONS_00207410 XLOC_125926 NonCoding NonCoding - 6:23347892-23353722 - TSS154917 5830 2 TCONS_00207410_9 134 0.0926243567753002 1 0 1.72333371503078e-05 3.12579338021033e-05 8.97322537255123e-06 1.0516600452595e-05 2.14811889678482e-05 1.40288715721895e-05 2.88780016705382e-05 1.12801021788367e-05 6.35072155119095e-05 0.00041251086712145 0.000191001510876784 0.000252096903565238 5.14478876342631e-05 0.000111004556234904 0.000136880232340654 0.00165019416274279 0.000591785563680731 0.00199994435028684 1.75275769134447e-05 2.9993852213128e-05 2.91036372079802e-06 0.000433635055153301 0.000511901343491923 0.000521894878950002 1.55748737310143e-05 1.42774587620872e-05 8.1051534842746e-06 0.000129203216094594 0.000149954028011754 0.00014697972206339 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 3e-112 412 93.12 0.0471698113207547 0 noncoding 1 0 1 1 -0.069690739815313 0.656150057551822 -0.417956814901918 0.00586549399704504 GGGAAATCGGGGTCCTTCGGAATGGGACCACCCACGAGGCCACGTCTGGAATGTCGTCGTGAGACCAGCCTCATCCTGAGGTGCGACCGGAAGGTCGGGAACCCATTCCAGACAAAGCAGGGGAGTCGACCCTCCTGTCCAGATCAGGAGGGTAGATAGGGCTCAGAGGAAGTGGTGCGGGAAAACCTCGGTGTTCCTCTTGAGGGAGACCGGGATGTCGGGGCACTTTGTGGGTCGCAATCAAGGGTGACAAGTACCGTTTCGGCCTCCAATACCTAACGTGGGACTTCTCCTGAGACACTGTAGCGGGAAAGGGCTTCATCTTGCGATGACGGGAGAACCACGTGGATTTTCTCGAGTTGCAGCGGGATTCTCGAGTTACGACGGGGAATTCAGGATGCCTCTTGTGTTGGCCCAGGGAAGTCCAATCTTCCATTCGAGTTGCGAAGGAAAGCTAGAGAATGCTCTCGAGTGACTGCAGGGCCAATAGACCTCATCTAGGCTTGTGTCCAGAAGCCAATGTTCCTCTCCAGGGGCGAAAGGGATCTCGGGGTTGCATTCCAGACGCACCCGGGGAGACAGGCATCCATCTCGAGTGGAAGCAAAGAACTCCGCTCTGCTCTTGAGTCGCGACGGGTATCTCTTGGAGCTCACTGGGTGGAATAAAGGGAGTCAAGCCTCTGGAGGCGTTTGGAGAGAGGTCGAGAGACTGGTCTCTAGGCCATACAGGAGACGAAGGCCCTCAAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATGTTTGGCACAGTAGTCTAGTCCCAGGGGACAAAATACAGGGAAACCTGTTATTACCTGTGGGACTCTGTTTTGAGTGAAGGAAGCAAGCATATAAATACATAAGTTGATATTTGTCACCCTGTATAACTTTTCAAAGTTACTATAAATCAACAAACATTTATTTAAGATAAAGGGAATTGTTATTTAAATATCAGATTTATCCATTATTAAAACTAGATTTGTCTAAATATCTTTCTCCACTATATTTTGTTATTGTTGAGTATGTTTTTTCATTTATAACTACTTTAGCCCCCCCTTCCAGAGACAAGCTAGTATTGACAAAATTAATTTTATTTCACTGGAAATTTTGTGCTCTTGATCTAGTTTTGCTATCCAGTTATATAGTGTAACTAAGAATGGATGCGTTTAGTGAGTTTATTATTTGCCAATCTATGTTAGATGAGGTTTGGTCTCAAAATGGTACCCTTGGCCCTGTTATGTGGGGAGGGTAAAAGTTGAAAGAAGTATTTTATACTTGCTCAAACATCTGATTTTTATCTCCAACTATACTGTGAACATGATATATCATTTAGAGACCTCGAACCAGCTTTGTTTAAATTTGTTGTTTTTAACTTTTAGATCTCCTTGTGTTTTACCACTCCTTGGTTACTTGTTCATGCAATACTTCACATTAATTCTAGTCTTGTTATAATTTCATGGCTAATGTATAACTGGATGTTTTCAACTAGTGGGCTGATGTTAATTTTGTCTTCCCTGTCTTTGAAATGCCTTATTTGCTTTCGTAGTTCAAAGCGTAGAAACTAGATTTGGTTCTGTGTCTTTACCCCCATTTAGAGATAATGCTTACAAAAGAATAGCTTTGAGTAATCTTAAGTGAGCTACTTTAATGGTGATTGAAAGAAAGAAAATTATAGTATTATTCACTCAAGCCATTCTTTGTACTTTGTCTGAATGAATAAGCATACTTGTCTCATAATTATAACTAAACAGGAAGTTAATTTCTTGTCAGTGATGTAATGAGACATGGTATGCAGCACTTATCTCTTAATCCTTAAAGTAAAAGAAACTTTTCAGAATTTCTCAGAAGTTACAAATCCCAAGCTAAATTGACTTTTAAAAGGGCTACTCCTTCCATATATGAAATTGTTCAGACCTGAAAATCTTTTTGCCAAACTCCCTTCTTTTGAAATCACTTCCAGTAGCCATGCATTTCTGAAATATTTGTTTTTCTTCCTTACTGTTTGTTTCTATGTACAGTATTTAAATTTCACAACATTGAAGTTTAAAAATTTTTTGTTTACTTCATAGCAGACTTGATGTTTATAAGAATTAGAGCAATTATTGTCTTACTAGTTGGGCAATTAATACTTCATGTTGACCTTTATCATTGGTCTGAGGATATACCTTTATATTTGCTAGATTGTAAAGCCTCTTTGAGGGTGATTCTTATCTCAAAATTTCTTAAGGCACTTATTCTCTTTGCTTCCTACATCATGCCCTCATCTTATCCATCTCCTAGGGTAATATTTTATGTTGGTCAGTATAGGTTTAAGAGGCAAGATCTGTCTTTATCGTGTGGATTTCCATGGTCATACAAATCTTCAAGTGAAAGTGTTGAAAGAAATTGGCTCTTAAATAAAATACAAGAAATAGCTTATACTAAGGGAATGAACTTTGTTTTCCCCAAATTGATGATACAAAATGTGTCTGTGCTACTTTAGTCATTATGACTTTGATGCAAAATGGATGGCAGAGATTGGAATAACATGATTGTGGAATGTGGTGGTAATTATTATACTTAGTATCATAATTATTGTACTTGACCTTACCACAGTAGTCATCTGAGTTAAGTTTTGCCAAGTCCTTGAGAGAATGATGGAACTAGACAAACTAGAAAAGGTTATTTAGAAAGTTACACCTCAACAGCAGAATTGATTAAATAGGAACTTTGTTTTTGTAAATGTTGGCTTTGGTTATGTTGCTCTAATGAGTAAGTAGTGGTGGTCATTAAAAGAATGTTTAGTGGAATGCATAAATAATAGTTACTGGAGGTTTTGAATCTTACTAATAACTCATCCACCCATATGTCTGGTCTATAATTTGGTTATTCATAATCTTATTTTTTCAATTTATAAGCTAGAGAAACAAAAGCAAATATTTAGCATTATGTTTAGACTTCTGCTCTTAGCCAGTATCTCTCATCCTTCTCATGTTTTACCTCTAATAGTCAATTGTCAAAAATACTGTGTCCCATGATGACAGAAGCAAAGATCTTCCTCAAAATAAACTGTAGGCTTTTGAGTCCCACATAAACAATGGTCAGACTCATTACTGTTTAATCATGTACCTCCAGATGAAAACACTCACTGGCTTAAGCTATACCTGTTGGTTGGCTGTTAGAGAAAATTCATTGACTTATTTTTCTATGGGTCTATTTAGGCTTTTAAGGGAAAGGAGAAGCATATTTCCCAGTGGGAGAAGGCCTGGATTCTCACACTGCCAGGTGTTCAGGAGGTCTCAGGAGAAGCAATTCAAAGGGAAGTGATCCTCAAAGGAGATTTCCCCACAAGAGCACATCATGGTGAAAAAGTGTCTTTTTTTTTTTAATGGACAATACAGTTTTCAGCATTGTGCCCTAGTTATATTAGGGGCTTCCCAGGTGGCATAGTGGTAAAGAATCTGCCTGCCGATGCACGAGATGCGAGTTCGATTCCTGGGTTGGGAAGATCCCCTGGAGTAGGAGATGGCAACCCACTCCAGTTTTCTTGCCTGGAAAATTCCACAGACAGGAGCCTGACAGGCTGCGGTCTATGGGGTCGCGAAGAGTCAGAAGCAGCTGAGTACACACACGTAAGCATACGTAGTTAATATGTTGTTGATCCATCTTAGTGCCCTTTCAAGGTGAGTGAAGCCTTTAGCTAATGTGTGCCAAACTCCCTGCCCCCTATTTTCTATTTCAGTGATCTTGATAGTTGGTAAAGAACCCACCTAAGTAGTGCTTTTCTCTATGGTCTGGAGGTATGGTCAAAGTACGAAGACTTCGTTGGTTATATATATGAGCTGTTCTTTCTGATTCTTGCCGCTGTTCCTCTTAAACTACTAAGAAGCAAAAAGCTGACAATTGAAGTTTTTCGTATAATTTTATAAGTTGTTTTTGTCTCTAAAGCCTTTGAAACCTTTAGGTTCTAAAGTCATTTTGTAAGGTGAACAGCAAAGACAAAATAGCTTTTGAAAATTCTTTGAATAGATGCTACATTGGAAACTGATCTCAAATCCAATAAATACGGTTCTTGCAGTGCCACAAATAATTGTTTTCTTACTTGACTTTAAAGTCCACATAACTTGAAAAATGGGTAACCTAGGCTCAATCTGAGTATAGTGAGATACAAACCAACGGTGAATAAGGAGAAACAAGAAAACACCAATTTTCTGTGTCTTGTTTAATTTGTGGCATTTATTCCTTGAGTAAAATGAAGAGTTGGGTTGGTGGGATTGAAATTTTTGTCTCCAGTTTGCAAAATACCGTGTCAAAGTAGTCATTAACTTTAAATACATCTTTGGAGCAAGGACACTTGAGAAGGTAGCCTTAAATGTATCTCTAGACCTATCTTTTAGGTTGTCTAGTAGATAACACTGCTTTGCTCTCCAACCAGTCCTGAAGCTCAGCGTGTCTTACATTTGGTTTGATTCAGTCTTTGCTTTCCCCTCTTAAGGGGGCACTAATGTAAAATGGATAGAAGACCTATTTCCATAAGATTGTAAGGGTAAAGTGATCAGTGTGTTAAGATAATTTTCATCCTTGGTGACTTAAGTTTATGTTCCTAATGTAGTTATCTATTCATCTATCCTTTGTAGCAGGAGTTCCTACAATATGTGGGTGAGGATGGTCTTTGATATCCCGTAAGTTAAGTAAAAGTTATTGTGTGGGCATCTGTATTAGGGATAGAGGGTCAGCAGTTCATCAGATTATTAGAATTCCTAGTCTTTGTCACAAATAATGCCATGTACATGGCTAGGAGTGTATGAAAATGTGAAGAAACTACAGAAACCAAATTTAGGATGGTCAAAAAAATTTAGGATAGTCTTGTTAACTTGTCAGGGAAAGGGATGGGTATGTGGGGAGTACATGAAACATCTGCAACACTTAAAATCTGAAGATCTAGAAAGTCAGTCATTTCTAGTATACTATTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCGGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCTAGTGCAGGAGAGTAGAAAGTGAAAGTGAAGTCGCTCAGTTGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCCACGAGACTCCTCGGTCCATGGGATTTTCCAGGCAAGGGTACTGGTGTGGGGTGCCATTGCCTTCTCCAATACTGTTGCTGGTACATCAAAAAATTCAACCATTTGTCTTGCTCAGAAAGCGATCAATGGCTTCGCATTGCCTGTGGAATAGGCTTTGCCATAGTATTCAAGACTCGAAAGATCCAGCCCTGATTAACCTTTCTAGCCATATCTGCTACTCTCTTAACCTGTACCCCACTGTGTGTCTGGTATACCAAACTACAAGCAAGTTTTTTAACATCCTGTTTTCTTTCACTCCCCTGGATTTTAATTTCTCTATCTTGAATGCTTATCCCTCTATCAAGACCGAGCTCAAATATCACTGGTTTAAACTCAGGCAAGGTTAATGATAACCGTTTCAAAATTCACAAAGCAGTTGAATGCCTTTTAAGTATTCAGGTTGTTTGAAACGTAATTTTTTAATTTTTTTATATTATGTCTGCTTTCTATTAGTCTATTGGGGAAGGCATTCATGGTCTATCTTGTTATTTTCAGATGTAATATGCTTGACACCAAAAAGGCAATCTCCATATAAAT TCONS_00202772 . 5' 97 TCONS_00202772 . 5' 97 EMBV3_32090 CCCTGTGCTGAATGAGGGCCAATGACAGCGAAGCAGAAACGGCTTTCGAACTTGGTGTTA Gene BVT0102_188825 + 0 NULL GK000020.2:39344448-39352550 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115079 TCONS_00115077 TCONS_00115078 1 XLOC_069426 Coding TCONS_00115078 XLOC_069426 Coding Coding RAI14 20:39351342-39486307 = TSS85671 4725 1 TCONS_00115078_4 980 17 0.965116623692244 0.0268885949467207 0.0263897742237107 0.0144436888334742 0.0149577629642974 0.0147070758202196 0.00737779206320815 0.0100322479147 0.0158103298967486 0.0119595905915934 0.0024198339529882 0.000451708520793759 0.000650480430119104 0.00349014509628113 0.00560338004805722 0.0053960393095528 0.00753460400295401 0.000369450452659465 0.00115106025324574 0.0204874849740655 0.0220446995235834 0.00723331258131287 0.00220648585806463 0.000725135011910241 0.00198379768543562 0.0315976712731176 0.0272292076423265 0.0175580798039986 0.000968285079054071 0.000637032894765583 0.000686478378551458 XM_005221621.1 RAI14 PREDICTED: Bos taurus retinoic acid induced 14 (RAI14), transcript 0.0 8502 99.94 0.998730158730159 NM_015577.2 RAI14 Homo sapiens retinoic acid induced 14 (RAI14), transcript variant 0.0 5279 84.63 0.998730158730159 TCONS_00115078_4 sp|Q9P0K7|RAI14_HUMAN RAI14_HUMAN Ankycorbin; 0.0 1741 92.45 0.998979591836735 5 coding 1 1 1 1 0.0155737134308414 0.918591493627474 -0.211592058355647 0.0621421250594305 ATGAAGAGCTTGAAAGCCAAGTTCAGGAAGAGTGATACCAACGAGTGGAACAAGAATGATGACCGACTGCTGCAGGCTGTGGAGAATGGAGATGCCGAGAAGGTGGCCTCGCTGCTGGGCAAGAAGGGGGCCAGTGCCACCAAGCATGACAGCGAGGGCAAGACCGCTTTTCATCTTGCTGCTACAAAAGGACATGTGGAATGCCTCAGGGTCATGGTTACACACGGCGTGGATGTGACAGCCCAAGATACTGCCGGACACAGTGCTTTGCACCTCGCAGCCAAGAACAGCCACCATGAATGCGTCAAGAAGCTCCTTCAGTCTAAATGCCCAGCTGAAAGTATTGACAGCTCTGGGAAAACAGCTTTACATTATGCAGCCGCACAGGGCTGCCTTCAAGCTGTGCAAGTCCTTTGCGAGCACAGAAGCCCCATAAACCTCAAGGATTTGGATGGGAATATACCACTGCTTCTTGCAGTACAAAATGGCCACAGTGAGGTCTGTCGCTTTCTTCTGGATCATGGAGCAGATGTAAATTCCAGAGACAAAAATGGAAGAACTGCTCTCATGCTGGCTTGTGAGATTGGCAGCTCAAACATCGTAGAAGCCTTAATTAAAAAGGGTGCAGACTTAAACCTTGTAGATTCTCTTGGACACAATGCCTTACATTATTCCAAACTCTCGGAAAACGCAGGAATTCAAAGCCTTCTATTATCAAAAATCTCTCAGGATGCTGATTTAAAGACACCAACAAAACCAAAGCAGCATGATCAAGTCTCTAAAATAAGCTCAGAGAGAAGTGGAACTCCAAAAAAACGCAAAGCTCCACCACCTCCTATCAGTCCTACCCAGTTGAGTGATGTGTCTTCCCCAAGATCAATAACTTCAACACCACTTTCAGGAAAGGAATCAGTATTTTTTGCTGAACCACCCTTCAAGGCTGAGATTAGTTCCATACGAGAGAACAGAGACAGACTAAGTGACAGCACTACAGGTGCTGATAGCTTATTGGATGTGAGTTCTGAAGCTGACCAGCAAGATCTTCTTGTCCTATTGCAAGCAAAAGTTGCTTCTCTTACCTTACACAATAAGGAATTACAAGATAAATTACAGGCCAAAACACCCAGGGAAGGGGAAGCAGACCTGAGCTTTGACTCTTACCATTCTACTCAAACTGACTTGGCCCCATCCCTGGGCAAACCTAGTGAAAACCCTCCTCTAGACTCCAAACCATCTCCATCTGTCATAACACATTCCTCAAGTAAATCCACTCTCGACAGTGATGTCAGAATCCAGCAACTCCAAGAGGTTTTACATGACTTGCAGAAGAGACTGGAGAGCTCTGAAGCGGAGAGGAAACAGCTGCAGGCCGAGCTCCAGACCAGGAGGACAGAATCAGTGTGCTTAAACAACGCCGAGATCTCGGAGAACGGCTCCGACCTCAGCCAGAAACTTAAAGAGACTCAGAGCAAATACGAGGAAGCTATGAAAGAAGTCCTGAGTGTGCAGAAGCAGATGAAGCTGGGCCTGGTCTCACCAGAAAGCGTGGACACTTACTCGCACCTACATGAGCTGAGGATCACCGAGGAAGAAATGGACGTGCTCAAGCGGGACCTCCAGGGCGCCCTGGAAGAAAGTGAACGAAATAAAGAGAAAGTGAGAGAGTTAGAAGAGAAGCTGGCAGAAAGGGAGAAAGAGGCAGTTATTCAGCCACCAAGGGAGGAGTACGAGGAAATGAAAAGTTCCTATTGCACGGTGATTGAAAATATGAATAAGGAGAAAGCATTTTTGTTTGAGAAATACCAAGAGGCACAAGAAGAAATCACAAAACTGAAAGATACATTGAAAAATCAGATGACCCAGGAGGCAGGTGATGAAGCTGAGGACATGAAAGAGGCCATGAACAGGATGATCGATGAACTCAACAAGCAGGTGAGTGAGCTGTCCCAGCTGTACAAAGAGGCCCAGGCAGAGCTGGAGGATTACCGGAAGAGGAAGTCTCTAGAAGATGTCACAGCTGAATATATCCATAAAGCGGAGCATGAGAAGCTGATGCAAGTGACCAATGTATCCAGAGCCAAGGCTGAAGAGGCACTGTCCGAAATGAAGTCTCAGTATTCAAAAGTGCTAAATGAGCTGACCCAGCTCAAACAGTTGGTAGATGCACAGAAAGAGAACTCTGTCTCCATCACGGAGCATTTGCAGGTGATAACCACTCTGCGGACCACTGCCAAAGAGATGGAGGGAAAAATAAGCAGTCTGAAAGAGCACCTGGCGAGCAAGGAAGGGGAGGTGGCAAAGCTGGAGAAACAGCTCCTAGAGGAGAAGGCGGCCATGACCGACGCGATGGTGCCCCGGTCTGCCTACGAGAAGCTCCAGTCGTCTTTGGAAAGCGAAGTGAGTGTGTTGGCCTCAAAATTAAGGGATTCCGTGAAAGAGAAAGAGAAGGCCCATTCAGAGGTTGCCCAGATTAGAAGTGAGGTCTCGCAGATGAAAAGGGAAAAGGAAAACATTCAGACTCTCTTGAAATCCAAAGAGCAGGAAGTAAATGAACTTCTGCAAAAATGCCAGCATGCTCAGGAAGAACTCGCAGAAATGAAGAGACATTCCGAGAGCTCCTCAAAACTGGAAGAGGATAAAGACAAGAAGATAAATGAGATGTCCAAGGAGGTCACCAAGTTGAAGGAGGCCCTGAACAGCCTCTCACAGCTCTCCTACTCTGCCAGCTCCTCCAAGAGGCAGAGCCAGCAGCTGGAGGCGCTGCAGCAGCAGGTCAAACAGCTGCAGAACCAGCTGGCGGAATGCAAGAAACAACACCAGGAAGTGATATCTGTTTACAGGATGCATCTTCTGTATGCCGTGCAGGGCCAGATGGATGAAGATGTCCAAAAAGTACTGAAGCAGATCCTTACCATGTGTAAGAACCAGTCCCAGAAGAAGTAAAGTGGATTCCTTGGCAGGACACTGGCCCCTTGTTGTCCACCTTTGTGTTACATCCAGAGTTGTCGGCAGCCACTGCCATTGTTCTCATTCGTGGTATCACTGTGACCCTTATCATAGAACTTCTTCCCTTTCCAGAGACTTCTGAGGACAGGTCCCTGGAGAAGCTGTCCTCCTTAGAACCGCTGAGAGACTTCAGAGCAGCAGAGGGGAAAGATGCTGTCACCCTCCGATTCTGACCAGAGCTGGGATCAGTCACGCTCAGGAGTCTGGTCCCTGCACTGGCAGTGGAGTATCTTCCCTGGTACCTGCCTAGCTAAGGGGCTCCATGGCTGCATGACACGACGCCCCATGCAGCCGTGCTTCTGTTCCTACAGCAGGGTTTTCTTTACCTTTGGTTTCCTAACCCCCCCAAACACAACTTAATTTCTAACCAAATTAGTATGACACTAGTTATGCACCATGTGCTTAAGATCCTTTATTGTGATATCCTGTGGATTTAAAAAACTTTAATTCCATCTTTTTTCCCCATCTGCCTTATATTTCTCACCACCCTGCTTGTCAATCTTACAGTCAGATGAGCACTATTAACTTAAATATGAAGTTTAAAAACGAAAGCAAATTGTCCTTAAAAGTTCTTTCTTAAGTACATCGCTGACACGTTGCAAATTTTCTATGCAAACTTGGCTCCTGCTGTTTGTTATCCACGAAGCTCAGGAAATCCAAACATTTGTGTTTCAACAAGGGACAGTAAACTGTGTGTTTACAGCCAAAAGAAATGCCTCATAGTTTTTAACCTCAATTTTTTAAAAGTGTTTTTTTTTTCTGTACAATATTTTTATTGGCTCTTAAAGATGTTTTCATATCTAAATCCCTAAGTAAGTGAAATTTACATTAGACTATATTAACAAAGTATTTTTTAGGTAATCATGCTTAAGACTTTATATATATAACTTTTTTCTCCACGTTTTCAGCTATAGCAGAAGGTGGTTATATATTCCACTCAAAATGAGCTGCCACCAACACCCCTAGACTTTCTGCCATTTGTTCTTAGGACTGTAGCACGTCTTTAAATATAGTAAATCCTCTTTAGCCCATTGAATATTTCTGAGTGCCCCAACTCTACCAGCACCTGTAAATTACCTCGGAAAGGACTGTGAGTACCAGTGGGTTTTTCAACTTTGAAACAAAAAATCCCGGTAAACGTTCCAGTGCCTAGCCGAGGTCTTGGGAGAAAACATCTCTGTTCCCTTTACTTTCAGGTTAAAAATGTTTCTGACTTGCTTGCAGCTTCCTTTATGGCCTTGATCTTATTGAGGGATGTAAACTGAAGACAGAAGTCTCTAATGTATAGAACCGTTAAGTGTAGGCCGGCTCTGACGGAGCTGCCTGCGCTCAGAGGCCACTTGGCAGCCCTGTGCTGAATGAGGGCCAATGACAGCGAAGCAGAAACGGCTTTCGAACTTGGTGTTACTTTTCTTAAGTTGTTTATAGTTCAGCAATTTCGAACATGCTCCAAAGAAAAATGTGAAAGGACTTTCTGTCACAGCACTTAAGAAAACACAAAACCACCCTCCCCACCCCCACACAGAAATGCTGCAGAGTGTAAAACTTGAGACATTTTGTAGGACGCCTGACAAAGTGTAGCCTTTTATCTTGTTTCAGGATATTTATTTCAAGTACTCTGGTTAAATACTGAAGTTACATGCTGTAGTTTAGCATTTTGCCTTGTAATTTACAGAAAAGTATTGCGGAAAATAAACTTTTGTTTCGTTTTGCATCTCC EMBV3_35498 GCTCGTTAATTTGGGATATCAAAACGCAGATGAGAACTCCGGTCCACCAGCCTCAAGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05966 ATTCAGAATCAGAGGTTGAGTATCAGAGGCAGGCCTTATTGCTGTCTTCAACAGGTGCTG Gene GeneID:511100|OIP5:XM_002690795:240_cdna Constitutive 0 NULL GeneID:511100 10 GENE OIP5 NULL Opa interacting protein 5 EMBV3_21079 TTGTATGTTTCTTACGTAAAAAAAAATGTTTAAAGCTGAAAGTTCATGAAGGGAATCTGG Gene GeneID:509865|RWDD4A:NM_001076824:28_cdna Constitutive 2 NULL GeneID:509865 27 GENE RWDD4A MGC139956 RWD domain containing 4A EMBV3_34767 CTCTAGTCATCATTCCCCGGATTGAACGTACCCTTGCTTATATCATCACAGAGCTGGATG Gene GeneID:404152|ATP6V1D:NM_001075141:47_cdna UTR3_Alt 3 NULL GeneID:404152 10 GENE ATP6V1D VATD ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D EMBV3_34853 AATCATAAAGAAATCCAACTCACCTTGTCAAAACTTTATAAGACGGGTCGGGAGATGCAG Variant GeneID:513303|TOM1L1:NM_001075611:20_cdna 240^725 1 EMBV3_07375 GeneID:513303 19 GENE TOM1L1 MGC142395 target of myb1 (chicken)-like 1 EMBV3_15484 CCCTGTGCTAGAAATGCATCGTAGTGGGTAGGTCTTTCTCATAAGCCTCCATGGCTCCTT Gene GeneID:525329|NCOA4:NM_001075868:26_cdna Constitutive 3 NULL GeneID:525329 28 GENE NCOA4 MGC138109 nuclear receptor coactivator 4 EMBV3_22947 CCCAGATAGTGGCAGAGGACCTTGTTGGAAGATTTGGGGGTACTTTCACTTGGTCATTGG Gene GeneID:505578|ZNHIT6:XM_002686285:136_cdna Constitutive 2 NULL GeneID:505578 3 GENE ZNHIT6 C3H1ORF181 zinc finger, HIT type 6 EMBV3_24322 GGGACCGCGGCTGTCAGGCCCAGAGGGCAGATGTGCTCTGCCCCAGCGTTCGTGTGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38062 TCTGACCGAGTGCTCGTATCCCTGATGGGGCTTGTGGTCCAGTTTATTAGCATCCTTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41079 TTCGGGGAAACGCTGCACTGGTTAGTTCAGATCCTGGCTCGAGCGTTCAGCCGTGCGGCA Variant GeneID:539048|LOC539048:XM_002698476:524_cdna 265^489 1 EMBV3_08396 GeneID:539048 26 GENE LOC539048 NULL similar to cytochrome P450, family 26, subfamily C, polypeptide 1 EMBV3_25415 GTTCCAGCCAGGAAATCCCCACGATGCCTCAGCCAATCGAAAAAGTTTCTGTGTCAACTC Gene GeneID:506325|ZMYND11:NM_001045940:23_cdna UTR3_Alt 3 NULL GeneID:506325 13 GENE ZMYND11 MGC137432 zinc finger, MYND domain containing 11 EMBV3_31093 AGACGCAGAAAGCACGTGGCTATGTTGTTTATCATGTCAGGTCCCAGTACCCGTCAGAGG Gene BVV0102_318715 - 1 EMBV3_43275 GK000022.2:44880159-44902372 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38859 CACGGTTGGGCCTTTACCCTGAAGCAGTTTGCCAAGAAGGTGGAGGACATGATGAAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35972 CTGCCTCTAGATGTCAAAATCCATTGTTTGAGTTTGTTTGCAGTTCCCTCAGCTTGCTGG Gene GeneID:523962|MAP3K1:XM_002696321:56_cdna UTR3_Alt 2 NULL GeneID:523962 20 GENE MAP3K1 NULL mitogen-activated protein kinase kinase kinase 1 EMBV3_10018 AGACTCTGGAACTAGAAAAAGAATTCCACTTTAACCGCTACCTCACTCGCCGCAGGCGCA Gene GeneID:100140629|HOXC5:XM_002687234:97_cdna Constitutive 0 NULL GeneID:100140629 5 GENE HOXC5 NULL homeobox C5 EMBV3_09629 GATGAGCAGGGAGAAGCGAGAGAAGCCTTTCTCAATGGCAGCGATGGACACAAGAGGAAA Gene GeneID:523277|CADM4:XM_002695157:746_cdna Constitutive 0 NULL GeneID:523277 18 GENE CADM4 NULL cell adhesion molecule 4 EMBV3_31231 GATCATCATATTTCAAACACCACAAACCATCCTTGGTTCCCTCGACTGCAAGCTGAATTT Gene BVT0102_001384 + 1 EMBV3_06550 GK000015.2:1609917-1625281 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14211 GTACCCAGGGGGCCCAATGTCCTTTAGAAAATCCATCCATCTATCTGATTTATGCCTTAG Gene GeneID:618015|TMX4:NM_001099170:14_cdna Constitutive 2 NULL GeneID:618015 13 GENE TMX4 MGC159915 TXNDC13 thioredoxin-related transmembrane protein 4 EMBV3_28271 GAGCACATAGGTGTTGCCCGACTAGCCTGTGCTGACATCTCCATCAATATTTGGTATGGG Gene GeneID:532436|LOC532436:XM_002693264:10_cdna Constitutive 0 NULL GeneID:532436 15 GENE LOC532436 NULL similar to olfactory receptor 649 EMBV3_05544 TGGGGGAATTTGCTTCAGGTTTTTATGGAGACCGTGCTGAGAGTGAGGTTCTTTCAGAAC Gene GeneID:100296333|LOC100296333:XM_002691026:379_cdna Constitutive 0 NULL GeneID:100296333 10 GENE LOC100296333 NULL hypothetical protein LOC100296333 EMBV3_01997 AGAGCAGCTGAGCAAACAATCAGAAGCCAGTAGCAAGCTGGACATTAAGGGGAAAGGAGC Gene GeneID:613734|SLC35D1:NM_001082459:61_cdna Constitutive 0 NULL GeneID:613734 3 GENE SLC35D1 MGC148294 SLC35D2 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 EMBV3_37304 CAAGGCATTAATGAGTTTCTCAGGGAGCTGTCTTTCGGGCGTGGATCTACGGCGCCTGTA Gene GeneID:613927|PDIA6:XM_002691528:558_cdna UTR3_Alt 2 NULL GeneID:613927 11 GENE PDIA6 NULL protein disulfide isomerase family A, member 6 EMBV3_04880 GATGGGCTTGACTTACAAGGTCGTCCAGCAAGTATTTAAGCTCTCTGAGCCTCGGTTTCC Gene BVT0101_036937 + 1 EMBV3_40507 GK000021.2:22859979-22876991 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37479 TGCTGAAATGCCGTGGTATCAAAGAAGGATCGCTAAAGTGCTGTTTGCAACTCCGCCTGG Gene GeneID:513788|FAM82B:NM_001037600:42_cdna Constitutive 1 NULL GeneID:513788 14 GENE FAM82B MGC134219 family with sequence similarity 82, member B EMBV3_41437 ACCTGACCCTGACCCTGGACGATTACCTCTTCATCGCCTTCGTGGGTTTCGTGGTCTCCA Gene GeneID:615203|LRRC55:XM_002693757:533_cdna Constitutive 0 NULL GeneID:615203 15 GENE LRRC55 NULL leucine rich repeat containing 55 EMBV3_17095 CAGTCCAGTTGGTACCCAAGCATCGAAACCCTCACGCTGGATTGGGTCACACCATCTCTT Gene GeneID:280781|ELN:NM_175772:20_cdna Constitutive 3 NULL GeneID:280781 25 GENE ELN MGC148808 elastin EMBV3_23466 AAAAATACCGCTGGAGCCGCTGGAGAAAAATAAGCAGATCCTAGTGCTGGGCCTGGATGG Gene GeneID:539310|ARL9:XM_002688280:52_cdna Constitutive 0 NULL GeneID:539310 6 GENE ARL9 NULL ADP-ribosylation factor-like 9 EMBV3_12503 GATCTTATCTCATGTACAGAAAAGCAGTATAATAACTCACTAAATGAAATTTGACCAAGG Gene GeneID:616643|TECRL:NM_001080324:2_cdna Constitutive 0 NULL GeneID:616643 6 GENE TECRL MGC128084 SRD5A2L2 trans-2,3-enoyl-CoA reductase-like EMBV3_41184 TCCAGCACACGTACAGGAAAGGCGTGAAGAACGACGACAGGACCGACCACCTGTCCTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30398 CTCGGGCTTCAGAGGCTACGGATGTGGCTCTGGATTTGGAAGCTTTGGATATGGCTACAA Gene GeneID:783287|LOC783287:XM_002684602:56_cdna Constitutive 0 NULL GeneID:783287 1 GENE LOC783287 NULL hypothetical LOC783287 EMBV3_41070 CAATGAATTTCACCTTTTTCTCAAGCGCGCATGGAACCTTCTCCAGGATAGATCACATCC Gene BVV0102_096027 + 1 EMBV3_13962 GK000018.2:3198097-3462168 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00233373 TCONS_00010367 TCONS_00019963 TCONS_00019989 TCONS_00022064 TCONS_00166080 TCONS_00244651 TCONS_00224115 TCONS_00250553 TCONS_00229820 TCONS_00135549 TCONS_00129726 TCONS_00136829 TCONS_00165811 TCONS_00231277 TCONS_00197449 TCONS_00249014 TCONS_00031938 TCONS_00064816 TCONS_00198626 TCONS_00020176 TCONS_00198800 TCONS_00221437 TCONS_00177994 TCONS_00251889 TCONS_00148277 TCONS_00210178 TCONS_00023334 TCONS_00017462 TCONS_00117178 TCONS_00244653 TCONS_00048822 TCONS_00152648 TCONS_00198662 TCONS_00055859 TCONS_00244654 TCONS_00250261 TCONS_00141422 TCONS_00056147 TCONS_00207067 TCONS_00254568 TCONS_00249913 TCONS_00197973 TCONS_00032586 43 XLOC_131641 XLOC_142855 XLOC_005918 XLOC_010641 XLOC_010667 XLOC_012735 XLOC_100918 XLOC_150512 XLOC_137411 XLOC_153496 XLOC_139314 XLOC_081772 XLOC_078439 XLOC_083040 XLOC_100651 XLOC_140766 XLOC_119110 XLOC_151957 XLOC_018183 XLOC_039540 XLOC_120280 XLOC_010854 XLOC_120453 XLOC_134752 XLOC_107767 XLOC_154830 XLOC_090159 XLOC_128688 XLOC_014001 XLOC_009039 XLOC_071344 XLOC_028953 XLOC_092413 XLOC_120316 XLOC_033667 XLOC_153204 XLOC_085850 XLOC_033950 XLOC_125586 XLOC_157500 XLOC_152856 XLOC_119632 XLOC_018826 Coding TCONS_00129726 XLOC_078439 NonCoding NonCoding - 22:6955223-6959541 - TSS96593 4318 2 TCONS_00129726_10 150 0.997452524316813 1 0 0.000913768732997205 0.00153476941138748 0.000982906946581886 0.000460273049587201 0.000786704246824026 0.00021951356043277 0.000401910729616734 0.000790661138123441 0.000492374061299112 0.000155582777951391 4.24118255802274e-06 1.65617533697068e-05 0.000116280787503428 0.00136192376730379 0.000346244215704037 2.49762457157553e-05 0 0 0.000482661900535963 0.000363497919274667 0.000327406138386306 0 2.47869662688346e-06 1.16474929126798e-05 0.000812025929919327 0.000464411040345058 0.000497715416709558 3.17779197986407e-07 2.38907977947972e-06 6.96184719449657e-06 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 9e-85 320 85.21 0.0648448355720241 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-67 260 67.69 0.206577119036591 0 noncoding AGTTAGGTTATTTATTTGACGTTTCTCTTGTTTCTTGAGGTAAGCTTGTATTGCTATGAACCTTCCCCTTAGCTCTGCTTTTACTGAATCCCATAGGTTTTGGGTTGTTGTGTTTTCATTTTCATTTCTATGCATATTTTTGTTTCTTTTTTGATTTCTTCTGTGATTTGTTGGTTATTCAGAAGCGTGTTGTTTAGCCTCTATATGTTTGTATTTTTAAGAGTTTTTTTTTCCTGTAGTTGACATCTAATCTTACTGCACTGTGATCAGAAAAGATGCTTGAAATGATTTCAATTTTTTTGAATTTACCAAAGCTAGATGTATGGCCCAGGATGTGATGTATCCTGGAGAATGTTCCGTGTGCACTTGAGAAAAAGGTGAAATTCATTGTTTTAGGGTGAAATGTCCTGTAGATATCAATTAGGTCTAAGTGGTCCATTGTATCATTTAAAATTTGTGTTTCCTTGCTGATTTTCTGTTTAGTTGATCTATCCACAGGTGTGAGTGGGGTATTAAAGTCTCCCACTATTATCGTGTTACTGTTAATTTCCCCTTTCATACTTGTTAGCATTTGCCTTGCATATTGTAGGGCTCCTATGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTGGATTGACCCTTTGATCCTTATGTAGTGTCCTTTTTTGTCTCTTTTCACGGCCTTTATTTCAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTTTCTATTTGCGTGAAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTGAGTGTCCCTTGTTTCGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTTTGTATCCATTCAGCCAGTCTGTCTTTTGATTGGGGCATTCAACCCATTTACATTTAAGGTAATTTTTGAGAAGTATGATCCCGTTGCCATTTACTTTGTTGTTTTGGGTTCGAGTTTATACACCCTTTCTGTATTTCGTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGCGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTGAAGCTTTTGATTTCTTCTTCATATTTGAATGAGATCCTTGCTGGATATAGTAATCAGGGTTGTAGGTTTTTCTCTTTCATCACTTTTAAGTGTGTCCGCCCATTCCCTTCTGGCCTGAGAGTGTCTGTTGAAAGATCAGCTGTTATCCTTATGGGAATCCCCTTGTGTGTTATTTGTTGCTTTGCTTTTCCCTTGATGCTTTTAATATTTGCTTTTTGTGTGTGTTCTTCATTAATTTGATTAATATGTGTCTTGGGGTGTTTCGCCTTGGGTTTATTCTGTTTGTAGCTGTCTAGGTTTCTTGGAACTCTCTGGGTTTCTTAAACTTGGGTGGCTATTTCCTTCCCCATTTTAGGGAATTTTTCAACTGTTATCTCCTCAAGTATTTTCTCATGGCCTTTCTTTTTGTCTTCTTCTGGGACTCCTATGATTCTAATGTTGCATTTAACATTGTCCCAAAGGTCTCTGAGGTTGTCCTCATTTATTTTAATTCTTTTTTCTTTTTTCCTCTCTGTTTCATTTATTTCCACCATTCTGTCTTCCACCTCACTTACCCTATCTTCTACCTCAGTTATTCTACTGTTGGTTCCCTCCAGAGTGCTTTTGATCTCAGTTATTGCATTATTCATTATTGATTTACTCTTTTTGTTTATATTTTATAGGTCCTTGTTAAACATTTCTTGCATCTTCTCAATCTTTGTCTCTAGTCTATTTATCTGTAACTCCATTTTGTTTTCAAGATTTTGGATCATCTTTACTATCACTAATCTGAATTCCTTTTCAGGTAGACACCCTATCTCCTCCTCTTTGGTTTGGTTTGGCAGGCATTTATCATGTTCCTTTACCTGCTGAGTATTTCTCTGTCTTTTTGTTTTGTTTATATTGCTGTGTTTGGGGTAGCCTTTCTGTAGGCTGGAAGTGTGTGGTTCCTCTTTATTGTGGAGCTTGCTCCCTTTGGGTGAGGTTGGATAAGTGGCTTGTCAGTGTTTCCTGATTAGGGGAGCTTGCATCTGTGTTCTGGTGGGTAGAGCTGTATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTTGGGTGTCTATGGGTTTGGCATGGCTTTGGGCAGCTTGTATTTTAATGCTCAGGGCTGTGTTCCTGGAGAATTAGCTGGAGAATTAGCATGGTATATCTTGCTCTGGAACTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGGGTAGGTATGGAGGCTTTTGGATGAGCTCTTGTCGATTAATATTCCCTGGAGTCAGGAGATTTCTGGTGACCTCAAGTTTTGGATTTAAGCCTCCTGCCTCTGGCTTTCAGTCTTATTCTTACAGTAGCCTCAAGACTTCTCCATCCATACAGCACCGATGACAAAACATCTAGGTTAATGATGAAAAGTTTCTCCACAGTGAGGGACACCCAGAGAGGTACACAGAGTTACATGGAGAAGAGAAGAGGGAGGAGGGAGATAGAGATGACCAGGAGGAGAAGAGGGGGAATCAAAGGGGAGAGAACAATCTAGCCAGTAATCAATTCCCTATGTGCTCTCCACAGTCTGGAACACTCAGAGACATTCACAGAGTTACACAGAGGAGAAAAGGGAGGAGAGAGAGAGAGAGAGGTGACCAGGAGAAGAGGGGAAGTCAAAAAGGGAGAGACCAATCTAACCAGCAATCAGTTCCCTAAGTGTTCTCCGCAGCCCAGAACACCCAGAGAGATTCACAGAGTTAAGTAGAGAAGCGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAAGAGTCAAAAGGGGGAGAGGGCAATCAAGCCAGTAATCACACTCCTAAGTAAAATTGGGTACTGAAGATTAGATTCTTAAAGGTACAAAACTGATAACAAATACCAAAAAGCAGAGATTACAAATCTAGGGTAGACGTTAGACTCTCAAAAATACAATATTAAAAAAACAAAACAAAATCAAAAAAATTATAAAATATATATATGAAGTTTGCTTTTAAAATAGGGTCTTTTTTTTTTGCAAGGTAATAGGTTATAAAAATGAAAATTAAAGGAGTAATAGAGGACTTAATTAAAAAAAATTTTTTTAATGATAATAGTAAGAATATATCTAGGAATTTCTCTGGAGCTGTTGCAGGCAGTGTGGGGTCAGTTCAGTTTCAGATAGTTCCTTGTTCTACCTTATACGTCTCAAAATCTGTAGGCCTCTTCCATTGTAGTTGGTGCTAACTGCAGGGTTTTAATCTGTTGAACCTGTCACTTCCAAAGTGATTCCCTCTGTTTATTTCCTTCTGTTTGCTGGTCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGGCGGTGGTGGTCACTTATTTAGGCTCACTTGTTCAGTCGTGCTGTGGGGAGGGAGGAACGCGGCAAACAAACATCACTGGTGTGTGTGGGGAGAGCCCGCAGTGTCTCGGCCACAATGGGTTTGCCCCCGCTCACAGGTGTGTGTGCTTTCCCGGTCTACACTGCTCAGGCTCCAGGTTCCTCTGCAGGGGAACTGTCCAAAGCGGGCCCTGGGTTGCGTGCACTTCCCAGGTCTAAGCCACTCAGGTTCAGGTTCTTGGGTACTCCACAAAGGCGCAGACTCGGTTGGGCCTGCGTTTTGTGTCCTTCCCAGGTCCGAGCAGCTCAGGTGACCAGGTGCTTGGCAAGCGCACTCTCCCCAGGTCGGGGTGCGTCTTATCGCCTCCCCCATCCAGCCGCTCGGTTTCCTGCGTGCTCAGCGGGAGCGCCCTCTCAGGTGTGCCGTGTGTCTCTTCTGGGGATCCGATCTCTGACTGTGACCCTTCTGGTGGATGTCAACCATCCAGGATCCCAGGAAGACTTGGTTAGCAACTGGAGCCTGCTCACAGTTTGCCCTCTCTGGGGCTGAGATTGCCCCTTTACTGCTCTGGCTGCCCCCTGCCTGCCTCCCTGTCTCCAGTGGGGGATGGGCCGGTCGGCAGCCGGCCAGCTCTCCTGGTATTTGCTCAGTCCTGTGTTCTGTGAGCTGGCCAGCAGTGTCTTAGGTTAGGGCTTTTCGCAGGATAGTTCTCTCTCTTTTTTCTCTCTCTGGCCATCCCACAGTTTGGGTTGCTCCCTCAGATTGCCCTCAGGGCATTCAGTCCCTGTCCTTATCCTAAGCAATGCAGCCCACGCGCCTCCATGCGCATGCTCCCTGCGAGCGTCTAGGCTACTTCTCAGCTGGGAGTTGCCTAGGC TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 12889 TCONS_00125853 TCONS_00125857 TCONS_00125858 . 3' 17206 EMBV3_28605 TGCACTTATAGACACACTTGGCTCATGTGTCTAGTTCATTGTGACCCAACTTGGCATTAA Gene GeneID:537999|NWD1:NM_001102210:101_cdna Constitutive 2 NULL GeneID:537999 7 GENE NWD1 MGC166244 NACHT and WD repeat domain containing 1 EMBV3_25257 AGCAGACATGTGTTCCAGATCCCTGAGGATACTTCCATAGTCAGAGGTCAGAGTGTGTCC Gene BVT0101_045515 + 0 NULL GK000015.2:39162318-39366106 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02371 TCCGTAATTATTGCTCATCTCTGTGTCCCGTATCATACTTGCTTATTAATGAGAGCTCAG Gene GeneID:526950|UBL3:NM_001038144:130_cdna Constitutive 1 NULL GeneID:526950 12 GENE UBL3 MGC128515 ubiquitin-like 3 EMBV3_33378 AAAGTCCAGGAGGCAGATGAAGCCAAGCTCCAGCAGACAGAAGCAGAGCTCAGGAAGGTT Gene GeneID:505556|VARS:XM_002697347:308_cdna Constitutive 0 NULL GeneID:505556 23 GENE VARS NULL valyl-tRNA synthetase EMBV3_01741 AGAGCCACCATTTTTGTAGTGGCCCGGAATGCCCTTGCTTCACTCCCAGTTCCAATCCTT Gene GeneID:787494|LOC787494:XM_002693183:160_cdna Constitutive 0 NULL GeneID:787494 15 GENE LOC787494 NULL similar to olfactory receptor, family 56, subfamily A, member 4 EMBV3_43479 AAAACCCAGGAGAAGCCGCCCAAAGAGCTGATATCCAAAGAGAAGAAGAAAAAGTGAAAC Variant GeneID:507722|VPS24:NM_001035051:56_cdna 147^207 3 EMBV3_39032 GeneID:507722 11 GENE VPS24 MGC137735 vacuolar protein sorting 24 homolog (S. cerevisiae) EMBV3_13483 TATTGTTGACATTAATACAAAATATGAGTATGGTTTAGAAAAGAGCAGCTCATATATTTT Gene GeneID:516722|ASB5:NM_001075744:17_cdna Constitutive 2 NULL GeneID:516722 27 GENE ASB5 NULL ankyrin repeat and SOCS box-containing 5 EMBV3_17765 AGCTAAGTGGACACTGTGTAATTAGTTTCTTCCACTCAAAATACTTACACACAAGCACAT Gene GeneID:530908|CREG1:NM_001075942:29_cdna Constitutive 1 NULL GeneID:530908 3 GENE CREG1 MGC140761 cellular repressor of E1A-stimulated genes 1 EMBV3_41273 CAAGGCCTCTGCCATCTACAACCCCATCATTTACGCCATCACCCACCCCAAGTACAGATT Gene GeneID:515152|OPN4:XM_002698937:20_cdna Constitutive 0 NULL GeneID:515152 28 GENE OPN4 NULL opsin 4 EMBV3_18577 CATCTTGATGGCGTATACCGTGGCCCTGGCTAACTCATATGGACGCCTCATCTCTGAACT Gene GeneID:512610|TMC4:NM_001110440:28_cdna Constitutive 0 NULL GeneID:512610 18 GENE TMC4 MGC127861 transmembrane channel-like 4 EMBV3_19632 TTCTGGTCCAAAGTCTGTGACGTGCTTCAGTTCCACTTTGCCTTCCTGTTCCTGACCAGC Gene GeneID:508380|TMEM187:NM_001075355:49_cdna Constitutive 0 NULL GeneID:508380 X GENE TMEM187 MGC140510 transmembrane protein 187 EMBV3_31330 GGTGATGTATTTTGCAGCTGTCCTGATGGGTGGTGGTCCTTTCACTGGTGTCCTTTACTC Gene GeneID:100298850|LOC100298850:XM_002688720:19_cdna Constitutive 0 NULL GeneID:100298850 7 GENE LOC100298850 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_33123 GGCTGAACAGAATTCCATTGTGTGTACATACCAGTTTCTTTATGCACTCGTCTGCTGGTG Gene BVV0101_034234 - 0 NULL GK000005.2:22799190-22804363 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191024 TCONS_00194118 TCONS_00194115 TCONS_00191026 TCONS_00191027 TCONS_00191020 TCONS_00191022 TCONS_00194120 TCONS_00191017 TCONS_00191021 TCONS_00194113 TCONS_00191018 TCONS_00194119 TCONS_00191025 TCONS_00194122 TCONS_00191014 TCONS_00194121 TCONS_00194114 TCONS_00191023 TCONS_00194116 TCONS_00194117 2 XLOC_116793 XLOC_117676 Coding TCONS_00194121 XLOC_117676 Coding Coding EEA1 5:22799328-22932555 j TSS144932 9541 1 TCONS_00194121_4 1410 0.0469552457813646 30 0.928610031075015 0.000894830833909033 0.000787410488941999 7.49265508391289e-05 6.92931520286866e-05 0.000343316652104523 5.30643447849518e-05 6.96096804302259e-05 0.000189182501629947 0.000673750661864521 6.8051524900357e-48 1.87338586376808e-10 1.51129321585339e-09 1.28891902806402e-05 6.88996327158837e-05 0.000110493116632825 0.000863969431501135 5.11989137628612e-05 0.00353463092574418 0.000765228263118695 0.000271704566360947 0.000518382260496326 1.0235722512394e-06 0.00110916946033779 6.35454740150671e-36 0.000495941773995739 0.00051367803290161 0.00010825882168129 2.31845590970946e-20 4.33452311811088e-06 1.42967877342532e-08 XM_002687214.3 EEA1 PREDICTED: Bos taurus early endosome antigen 1 (EEA1), transcript 0.0 9566 100.00 0.555811759773609 NM_003566.3 EEA1 Homo sapiens early endosome antigen 1 (EEA1), mRNA. 0.0 6832 88.58 0.553086678545226 TCONS_00194121_4 sp|Q15075|EEA1_HUMAN EEA1_HUMAN Early endosome antigen 1; 0.0 2415 91.57 0.999290780141844 1 coding 1 1 1 1 0.0737419250402083 0.840660240228672 0.0545800813198035 0.460196309374388 CCGCCGCCGCTTTCGATTGGTCGCAGCTGCGGGCCAGGCCCCTTCTAGCCCCGCCTCCCGTGGATGGACAGGCCGAGAGGGCGGTGCGGTGGAGGGTGGGTCCGCCCCGCTGTCAGTTACGGGGGAAGACCTGGCAGGCGGGCGGCGCTCCCTGGCTACCCCGTCGCTCTCTCGGGCGCGCTCCCTCTCGCAGCTTGCGGGGAAGTCCGGGCCGCCCGAGCGGCCGCCGCCACCGCCTCGCCCCGTCCTCCTCCCAGTCCTCTCCCGGCTCAGTCCCTACAGCCCGCGCACCCCCGAGTAGTGAGAGGCCCCCGCGGAAGGTTCGGAGAGTCACCGCGGCGGCGCCGGTGGTGTTTAAACCATGTTAAGGAGGATTCTACAGAGGACTCCTGGGAGAGTTGGCTCTCAAGGTTCAGATCTAGATTCATCAGCAGCTCCTATAAACACAGTGGATGTCAATAATGAAAGCTCTTCAGAGGGTTTCATATGTCCACAGTGTATGAAATCTCTTGGATCTGCTGATGAACTTTTCAAACACTATGAGGCAGTCCATGATGCTGGTAATGACTCAAGTCACGGAGGAGAAGCTTTGGCTCTGAAGCGAGATGATATAACACTACTCAGACAAGAGGTCCAAGACCTACAGGCTTCACTTAAGGAAGAAAAATGGTACTCAGAAGAATTAAAGAAAGAATTAGAAAAATTTCAAGGGCTGCAGCAACAAGAGTCCAAACCTGATGGATTAGTGGCTGATTCATCAGCAGAACTACAGTCTTTGGAACAACAATTAGAAGAAGCCCAAACAGAAAATTTTAATATTAAACAAATGAAAGATTTGTTTGAACAGAAAGCAGCCCAACTTGCTACTGAAATTGCAGATATAAAGTCAAAATATGATGAAGAAAGGAGTCTTAGAGAAGCTGCTGAACAGCAAGTGACACATCTAACAGAAGAATTAAACAAAGAAGCAGCTGTGATTCAAGATCTAAAGACTGAACTGCTTCAGAGACCTGGAATAGAAGATGTTGCTGTATTAAAGAAAGAACTGGTCCAAGTTCAAACACTAATGGATAACATGACCTTGGAACGTGAGAGAGAATCTGAAAAACTCAAAGATGAGTGCAAAAAGTTACAAACAGAATATACTAACTCAGAGGCCGTAATAAGCCAGCTGAGGAGTGAACTTGCCAAAGGCCCGCAGGAAGTTGCTGTGTATGTGCAGGAACTACAAAAACTTAAAAGTTCAGTTAATGAATTAACACAAAAAAATCAGAACTTGACTGAAAAGTTACAGAAGAAAGAACTGGACTATACTCAGTTAGAAGAGAAACATAATGAAGAATGTATGAGTAAAAAGAGTATACAAGCAAGCCTTCATCAAAAAGACCTGGATTGTCAACAGCTTCAGTCAAGGTTATCTGCATCTGAAACCTCACTGCAGAGAATACAGGCAGAACTAGGTGAAAAGGGAGAAGCTACTCAGAAGCTCAAAGAAGAATTATCAGAAGTGGAGACCAAGTACCAGCATCTTAAGGCAGAGTTTAAACAGCTACAACAACAGAGAGAAGAAAAGGATCAGCATGGGTTACAACTGCAAAGTGAAATCAATCAATTACATAGCAAACTTCTGGAGACAGAGCGCCAACTAGGAGAAGCTCATGGAAGGCTGAAGGAACAGAGACAGCTTTCAAGTGAAAAGTTGATGGATAAAGAACAACAAGTGGCTGATCTACAACTCAAACTTTCTCGTTTAGAGGAAGAGTTGAAGGAAAAAGTAACCAATTCCACAGAATTGCAGCATCAGTTAGATAAAACAAAGCAACAGCATCAAGAACAACAAGCTCTTCAACAAAGCACTACAGCAAAACTTCGAGAAGCTCAGAATGATTTGGAACAAGTACTACGTCAAATTGGTGATAAGGACCAAAAGATCCAGAACCTTGAAGCCTTATTACAGAAGAGCAAAGAAAATATTTCTTTACTAGAAAAGGAGAGAGAAGATCTTTATGCAAAAATTCAGGCTGGTGAGGGAGAGACTGCTGTTCTTAACCAATTACAAGAAAAAAACCATACATTACAGGAACAAGTAACTCAGCTAACAGAGAAGCTGAAGAATCAGTCAGAAAGCCATAAACAAGCCCAGGAGAATTTGCATGACCAGGTGCAGGAGCAGAAGGCACATCTTAGAGCTGCACAAGACCGTGTCCTTTCCCTAGAATCCAGCATCAATGAATTAAATAGTCAGTTAAATGAAAGCAAGGAGAAGGTTTCCCAGCTTGATATACAGGTTAAAGCCAAAACTGAATTATTGCTATCAGCAGAAGCAGCAAAAACTGCTCAGAGAGCAGATCTTCAGAATCATCTGGACACAGCCCAAAATGCATTACAAGATAAACAGCAGGAGTTAAATAAGATCACTACTCAGTTGGATCAGGTCACTACAAAGTTGCAGGACAAGCAAGAACATTGCAGTCAGCTGGAAAGTCATCTTAAAGAATACAAAGAGAAACATCTGTCTTTAGAACAGAAAACTGAAGAATTAGAAGGTCAAATCAAGAAACTAGAAGCTGATATGCTTGAAGTTAAAGCAAGCAAGGAGCAAGCTTTGCAGGGTCTACAACAACAGAGACAGCTGAACACAGATTTAGAGCTTCGAGCCACAGAATTGAGTAAACAACTTGAAATGGAGAAAGAAACAGTATCTAATACAAAGTTGGATCTACAGAAGAAATCTGAAGCACTTGAAAATACTAAGCAAATGCTTACCAAGCAAGAAGAAGAAAAAACAATGCTTAAACAAGAAATTGAAAATTTAAGTCAAGATGCAAAGATGCAGCACAAGGAACTGAATGATAGGATTCAAACAGCAGTAACAGAACTACAGAAAGTGAAGGTGGAGAAAGACTCTCTGGTAGCAGAGCTTTCTGCAGCAAAAGAGAAACTGTCAAAAGTTTCTGATTGTTTGAAGAACTCCCAAAGTGAATTTGAAAAAGAAAATCAGAAGGGAAAAGCTGTTATATTAGATTTGGAGAAAACTTGCAAAGAATTAAAGCATCAGCTTCAAGTACAGACAGAAAGCCTGCATAAGGAGCAGAATGAAATGAAAAAGTCACTTGAAAAAGAAAAGGAGACTTCTCATCAGTTGAAGTTGGAGCTCAGTTCCATGCAGGGACAAGTCATACAGGCCCAGGACAGCTTAAAACAAAAGGAAAAAGAAGAACAACAGCTTCAGAGTAACATAAATGAGCTAAAGCAATTGACTGAACAGAAGAAAAAGCAAATTGAAACACTCCAAGGAGAAGTTAAAATTGCTGTTTCACAGAAGACAGAACTTGAGAATAAACTACAGCAGCAGTCAATGCAAGCAGCACAGGAACTTGCAGCAGAGAAACAAAAAATATCAGTGTTACAAAACACCTATGAAAAAAGTCAGGAAAATCTAAAACAGCTTCAGTCGGATTTCTATGGGAAGGAATCTGAACTACTTGCCACAAGGCAGGATCTTAAGTCTATAGAAGAGAAGCTTTCTCTAGCACAGGAGGATTTGATATCAAACAGAAATCAAATTGGAAACCAAAATAAATTGATTCAAGAACTGAAGACCACCAAGACTACTTTGGAGCAAGATTTAGCAAAGAAAGAACAGCAATTGAAGGAACAGAATAAAGCACTACAAGATATGCAAAAAGAAAAGTCACTAAAAGAAAAAGAACTAGTAAATGAAAAATCTAAATTGGCAGAGACAGAGGAAATTAAGTGTAGACAAGAAAAAGAAATTGCTAAATTGAGTGAAGAACTCAAGTCTCACAAGCAGGAAAGCATAAAGGAAATAACAAATCTCAAGGATGCCAAACAGCTTTTGATTCAGCAGAAATTAGAGCTTCAAGGGAAAGTAGATTCCCTGAAGGCAACCCTTGAACAGGAGAAGAAAACCCAGCAAATGCTAAAAGAGCAGATGAAAAAGGAAGAAGATGAGCTGAAGAAAGAGTTTATGGAAAAGGAAGCTAAACTGCATTCCGAAATAAAAGAAAAAGAAGTAGGAATGAAGAAGCATGAAGAAAATGGGGCTAAACTTACCATGCAGATCACAGCATTAAATGAAAACTTGGGCACCATAAAGAAAGAGTGGCAGTCCAGTCAACGGAGAGTCAGTGAACTCGAGAAACAGACGGACGACTTACGGGGTGAAATTGCAGTACTGGAAGCGACAGTTCAGAATAACCAAGATGAAAGGAGAGCACTGCTGGAAAGGTGTCTTAAAGGAGAAGGTGAAATAGAAAAGCTTCAAACCAAAGTACTAGAATTGCAAAGAAAGCTGGATAATACAACTGCAGCAGTGCAGGAGCTAGGCAGAGAGAATCAGTCCCTTCAAATCAAACATACACAGGCGTTGACTAGAAAGTGGGCTGAAGACAGTGAAGTACAAAACTGTATGGCCTGTGGGAAAGGCTTTTCCGTAACAGTGAGACGGCATCACTGCAGACAATGTGGAAATATCTTCTGTGCTGAGTGTTCAGCCAAAAATGCCTTAACTCCTTCTTCCAAGAAGCCTGTTCGTGTCTGTGATGGATGTTTCAATGACTTGCAAGGATAATGGGTTATCACAACTTCAAAGTAAATTACAGTAACATTAGATTTTTAATAAATGCACTTAATAGAGGTCCTGGACTACTACTATTTGATTTGGACAGTGGTTGCAAAACTAAACCAAATTAGAATTCGTATATTTTGGAATGTTATCAATATCAAGTAAAATTCTTCTATTTTTGTGAGACTTGAGTTCATCTTTCTCCATTTAACCCTGGAACAGCTTTCATGCCAAGTTTAGAAGTAGCCAATGAAATGTAAATAAATTTTGGACGGAAAATAGCAATGTATTTTTTTAAATATAATTTCATTGTTCAGAAATGATATGAATACACTTCCATAGCTGCTGCTTTCTCCCAAATTTAGTGTATGGAAATGTACATAGGTGATGCTACCCTATCAGATATATTGCACAATAACACATCAGTTATATTCAATATTCTCATTATAAAGTCATGCACAGAACTATAAAGCTTTCTTTTTTCTTATATATAGGTCCATAGCTCAGTTGCATTGTTACAAATTTACTACTGAAGTGTTCTAAATACAGATTATGTTTAAATATGTATTAACCATGAATTCAAACATGGTTTTTATGTTAACTATATTGATTTAAGTTCTCTTGGGTGAATTTTATGGCAATCTCTTTAAAATTAATTTGCTTATTTTATGACTATCCATATTTTATCTGTATTATGGCTATTCTTGGGTTGTATTTAAAGATTAGGGTTAATTTTTCTTTTCTGTCTTTCTAACTGATTTTTAAACTCCCACATATTCTTAATTAAAAATCCTACAAAACCTACCATAAGTGCTTTCAGGTATCATGCTGAAATGAAATTATCATGTTATATTCTTCCTATAATGTATACAAACTAAAAGAGATTGCCATATATTCATTAATTATTTTAAAAACCCATTTAAGTAAACTCTGTTGTCAGTAGCTATCAAGGGCCCTGACTGAGTCCCTGGACTCAGATAAACATAACATCCTTGAGCATAAATATTGAAGAAATATAATGGTTCCTTATTAAAAATAAGTTGAATAATAGAATTTATGCATTTTCATACACTTACAATTCAAATACTCTTAATTCTACACTTAATTATAATTGATAAGCATGTTGGAATAACATTCACAGCACAGTTACTCTTTTTAATGATAATGAAACTTCATGAGAAATTTCTTGAAATATTTGTTCACTTCATCTCCTAATTGGGCGCACTGAAGGCCTTTCCCTGTCTTGTTCCCCCTGCCCACATACTCATAAAAAAATTGTGGGGACAACAAATACATATGTGTTTGAGTATTTTCTACTTTTCATCTAGCTAATCTTACTTTATAAGCCCCAAATAATTTGAACACATATTAAGTAGAAGTGAAACCTAAAATTTAGCTATTAGTCTCACCAACAAGGTGTTTTGGAAACAGGTTTTCTTTTTAATTAAAAAGTCATCCTCTTAGTGCTTATTGGTTCTACATTTTAGATGTCTGCTAGGACTGTCAGTGATTTAGAGCTGGCACATGGAGTCCCAGCTCTAACGCAAAGCATATTGGCAAAGCATAGTAAATTCTAAGCCTCAGCACAGAAATATGAGTTAATAATCAAGTCTTGCTGGGTTAGTGAACAATAAACTATACCTACGGAATTTTTAGTAGAAGACAAAGCTGCTGTTATAGGATTTTGAAGAAAAAAAGAAAGAGGGAAACAAACACAAAAACCTCAATGCAATGTATAATTTTGTTCAACTACCTCTTAATGTGGAATTAGTTTAATAGTTTCCTCACAGTAATGTTAAATAGTAACTGCCAAATTTGTTAGTTCCCCATCTCTGTTGAAAAAAATTATGATTATTTTATAGTTTGGAGAACTTTAAAGAGACTTTTTTTTTTTTACCGTGCATTTGCATAAAGATGTTTAGCTTTTAAGTGGAGAGCAAATTATGATCATATATTTTGATATTATTCATGACCTATTTGGCTAGTTTTTTTTAAATGCACTTTGGCTATGAAACCCTGGATGATTCGATCCATAAGATTTACATGTGCCATCAGTTTAGTATGCCTAGACATGAGCTTGATGGATGGCATTGTGTGATGATATAACGTGCCACACTTTATTGTCTTAATTGCTCTTTGCCTGAATTTTAATGATCATTGTTGCAGATGTGAATATTGTGTATAAACTTACTAAATTTATGTAAAATTGTATAAAATAGAATTGGAAATAGCTAGGTTCTCTCTGTGTAGAAGTAATGAATTTATTGTAACGTGACGCAGTTATGTCTATGACATTCTGTACTTCCTGAACTGGATCATATTCATAGCCTCTGTAGATACTTTTGCATGAATATTTTCTCCCTTAGATTTTGGACTCAATGTATTGTTTACTGTTTGTGATCATGTAGTTGTGCCTTATTTGTGAGAGAGTTTAGCTCAGTAAATACTGCGGTTTCTAAACTCAGTGAGTGGAAGATTATTGATTAGAAATGTAACCTGATAAATTACATAACATTTAAATCTGTATAAAGAACAATGGAAGGATCCTTTATTGAATTGTTGCTTTTTTAAAAAAATGCTAAAGACATTAAAAATCCTTTCTAGTATATTCTGTGACTAAATTATTTTGTCAAATTATTTAAAAAGATAATAATGTAAAATGGCTGTTACCTTGTTTACAGACTTAGAACTTTGCAGTTGTATATAGGCAGTGGGTGTGCTTTAATGTTCAGCTTAGAATAGTAATTAAGTTCATAATTTCAAGAGAAATTACTAGTGCTGTTTTGCTTGAGACATCACCTTTTCACTCCATTATTGCAGAGAATTAGCAAAACAAAAATATTAAACAATATTAATATTAATCCTGTTTCATTGTACACTTAAATTTAATAGCTAGGTGACCACTTAACATTTTTCTGATGGCTTAATGTGCTGTTGCTTTTTGCTGTCCCCCACCCTCAGGAAGCAAAGTTTTAGAAGTGATTTTTCAGTTTACTCTAATGTGTTATTCTCTGAAAAGAATGTATATATCCTCAAACACTTATTAGATGTGTTCTTTTGTGAGCTTTATAGAATTCCACTTCAAATACATAGCATATTATTTAAATTTTATTGTGGTAAGTACAGTTAATATGAGATCTACCCTCTTAAGTATACAGTATAACAGATCTCCCAAGTTCACTCATATTGCTTAACTGAGACTTTATGGCCCATTGATTGATTAGGAACTCCCCATTTCCCTCTACCCCTTGGCAACTATCATTCCACTCTTTGAATCTATGAACTTGAGTATTTTAGAAATCTCATATAAGTAGAATCATGCAGTATTTGTCTTTCTGCAACTGACTTATTTCCCTTAGCATAATGTCCTCAAGCTTCATCTGTGTTGTTGCCTGTTTCAGAATTTTCTTCTTTTTCAGGGCTGAACAGAATTCCATTGTGTGTACATACCAGTTTCTTTATGCACTCGTCTGCTGGTGAACATTAAGGTTTTTTCCACATCTTGGCTATTGTGAATAGCGCTGCAGTGAACATAGGAGTACTAATATTTCTTTGTATATAGCATATTCTACAGCTGTTTCACATCTTAACTAAATTTACACGTTAGTCTTTTTTTCCTCCCTTTAGTGAGATTTAAGGGAGAAATTAGTTTTTATACCTACGTGTTTAGTGGCCTCAGGGAACGAAAAGGAGTCTTGAGAGATCACTAGTCCTAGTCCACTGCTCTTTGCTAGGTTGGCTGATCTCTAGAAATCCTTGCAAGATGATTTTTCTCTAAAAAATACATAAATTAGTTTTCATCTCTAAGGACTTAAAATTTGTTCTCCTGTACTTTGCCTTTTTTCTTTCTTAGGCTCTGACAGTAGTTACTGGTTTCCCTTTCATTTTCACTTACTCCTAATATGACATTATTACACAGGCTGTGACCCTCCCTTCTAATAGTGCTTGGCCCTTTAAAAGTGCTATTATGGTACACTTGTCCACACTGCCTGGTTTACATGGTGAAACGTGCATTCTTCTCAAAGAATTAAGTGTTCTCATGACCTTCAAGCGCCATCCTCTCTATCCCATTCTCCAGCTTAAGGAGATCAGTTTAAGTATCATTCGTCTTGCGATCCAAGTTGATAAATATACTACTTCCATTTTGGAGACTGCAGAAGGTACTATGTCTGAAATTGTCTCAAATGAAAATCACAAATTTCAATCTGAGAATATGAACTAATTCCTTACCTGCAGTTAACAGTATATTCCACCATGATAATAATTCAAGCTGCCTTTCTTGGTAACAATTATAATGATGTTTTAAGTCCTGCCAAATAAGATGCAGTGACTGTACTGTGCTAACTCACACACACATTCAAAACCAGAAGGTTTTATGACAAACGCCATTATTCAAAAAGTGAGATTTAGAGACAGATATGCTACTATTTCTATGAAACCCCCAAGTAAAACTTAATTAGTAAAACTAGAACAGATAATTGCTTTTTTCTCAAAACAATGGAATTTAGTCTTTGGGATTTTCTCCAAATTAAGAGTATTATAAAGTATACCTGAGATAAGTAAACTGTTGGAGACTAGGAAGTTAAAAACCACTACTAAGATGAAGACATTATTATTCATTGCCTAATATGTTAAAAGAGCAATCCGACTTTGTATGAGGTAGGATTGTAGAGCAGTAAAACTGATTTATAAGCCGGGTAGGAGACTTGGTTTCATTACAGATACACATAAAAGAAGATGCTAGAATTCATATCAGACCAAAGCAGTGGGCATTGTTTTCCGACACTGCATCCACCTGATCATCCACTACGAACTGTAACAGCCTCATACTTCCCTCGCCCCCCTTTCAAGCCTGACTGAAGCATTATGAGATACTCCGGGATATCAACATGTGTATACTTAACAAGAAATTCCTCAGGGTTCGAATTTGTTGAAGCCATTACTACTCTACCC EMBV3_11038 GCTGGGATATGAGTGGAAAAGGCTTACAGATGCTGAAAAGCGCCCATTCTTTGAGGAGGC Gene GeneID:280931|SRY:NM_001014385:8_cdna Constitutive 0 NULL GeneID:280931 13 GENE SRY NULL sex determining region Y EMBV3_43725 AAAGGATTTTGAAGTGAAAGCTGGGACAGTGTGCTGGGCGACTGGATGGGGCCGAACTTT Gene GeneID:788383|LOC788383:XM_002697112:25_cdna Constitutive 0 NULL GeneID:788383 22 GENE LOC788383 NULL similar to testis specific serine protease 4 EMBV3_40265 CTGCTTAATTGTATCCAAGATACAATGAAGCGTGGGGTATCTAGCAGGACGTCTAGTTCG Variant GeneID:524683|SAMHD1:NM_001075861:1150_cdna 371^531 1 EMBV3_15451 GeneID:524683 13 GENE SAMHD1 MGC142499 SAM domain and HD domain 1 EMBV3_33197 AAGCTTGTCTTCAAACACACCAAGCTCACTCCCTCTTCTGAAACCTTTCCCCTTGCTGCG Gene BVT0102_304301 + 0 NULL GK000025.2:39672871-39683975 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28017 AAGCTGGTGTGGTAATTTTTGTACGAATGCTGGTCAACCTGATGCCCTTGCTCCTGCTCC Gene GeneID:521256|LOC521256:XM_002693304:139_cdna Constitutive 0 NULL GeneID:521256 15 GENE LOC521256 NULL similar to olfactory receptor, family 51, subfamily F, member 1 (predicted) EMBV3_25983 CCTTCATCCTGGTCTCTTATGTTCGCATCTTTGTCTCCATCTTAAGCATCCGCTCACCCC Gene GeneID:523753|LOC523753:XM_002686443:442_cdna Constitutive 0 NULL GeneID:523753 3 GENE LOC523753 NULL similar to olfactory receptor MOR258-3 EMBV3_16548 TCTTACTTTTTGGAAGGGCGACTGTGATTGCAGAACAGGAAGTGAGAAAACACTGCCAGC Gene GeneID:509304|LOC509304:XM_002685035:92_cdna UTR3_Alt 2 NULL GeneID:509304 1 GENE LOC509304 NULL hypothetical LOC509304 EMBV3_30838 TTTGCCAAGCACTGCGTGAAATGCAACAAGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCT Variant GeneID:509056|FHL1:NM_001113258:17_cdna 615^801 2 EMBV3_36066 GeneID:509056 X GENE FHL1 MGC127148 four and a half LIM domains 1 EMBV3_36223 AGGAGAGTTGATACTGGGCTGGTGCAGGGACCAAATCCAGGGCTTAGACACAAGCAGTAT Gene GeneID:100336786|LOC100336786:XM_002692619:9_cdna Constitutive 0 NULL GeneID:100336786 14 GENE LOC100336786 NULL serine/threonine-protein kinase MARK2-like EMBV3_41108 GAAGTTCTCCGAAGGGTGGAGGAAGCCAAGCGCATCATGGAAAAGCAGTTGCTCGAAGAA Gene GeneID:540543|ARGLU1:NM_001038190:10_cdna Constitutive 0 NULL GeneID:540543 12 GENE ARGLU1 MGC134421 arginine and glutamate rich 1 EMBV3_12035 CATGAGACTGCCTAGGTTCAGATCCTTACTACTTGATCTCTTTGTGCCTCAATTCCCCTC Gene GeneID:614311|CCDC76:XM_002686170:328_cdna UTR3_Alt 2 NULL GeneID:614311 3 GENE CCDC76 MGC137577 coiled-coil domain containing 76 EMBV3_11866 AGCCTCTGTTCCACAACAAGAGAAGCCGCCAAGATGAGAAGCCAGCACACCACAACTAGA Gene BVT0102_048746 + 1 EMBV3_28895 GK000025.2:27181609-27214941 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144943 1 XLOC_088695 NonCoding TCONS_00144943 XLOC_088695 NonCoding NonCoding - 25:27182267-27188062 - TSS108722 4342 3 TCONS_00144943_8 94 0.301243666513128 2 0.250949257852951 5.01360994068718e-05 4.39705842376721e-05 0.00013640155210954 7.65006985121299e-06 0.000131900717683418 0 9.40164688492917e-06 1.36221089544606e-06 7.4503814640949e-05 0 6.85386003119255e-06 0 1.98246151088049e-06 4.98349949914434e-05 0.000214123559667645 4.8662560600557e-05 0 0.000161802116807784 0.000100743188967482 0.00015071867673659 5.2436549669813e-06 0 2.112862883773e-06 3.86102926727364e-06 0.000273660097098481 0.000103848392720649 2.42894517673123e-05 0 0 0.000405709091344001 XR_138726.2 LOC100847934 PREDICTED: Bos taurus uncharacterized LOC100847934 (LOC100847934), 4e-52 212 77.05 0.0663288807001382 0 noncoding 0 0 0 0 -0.332836955164558 0.110874903836632 0.00688707792516657 0.889217706684363 GGGAAACTAGGAAGTGTCCTCATCACGGAACATGTTGCTGTTTTGTAGAGAGAGGCCAGGGGTATTTCTCTGAGAAGATGAGCTTTTATGTAAAAAACGGACAGGAAGCAGGTGTGTGAAACTGCCTGCCTTCTGCTCCCTCCAAAAACTCCAGAAAGAAGACAATCTAGACTGAGGAAATGGACTCGGGTGCTATTTGCTAATTCTTCAAGCATTCCAGGAGGGGAGAAAAAACAACTTTCAGGAGGGGTGAAGTTGATTTTTTTTTTTTTTTTAATATTTATTTGACTGTGCTGGGTCTTAGTTGTGGCATGTGGGATCTAATTCCCTGACTAGGGATTGAACCCCGGGCCCCTGCGTTGGGAGTGTGGAGTCTTAGCCAGTGGACCACCAGGGAAGTCCCAAAGTTGATTCTTTTCCTTCTTAACCTTCCCTTGTTCTTTCTGATTTTGCTGTAGATCATTTCTCACTTCAATCTCCTCCAAGATTCACCTCTATTCTGCCTTGTCTGTCCTTCCCTTGTCTGGCTAACTCCCTCTACAGTGGCCATGAAATGAGGTGGTAGAGGCAGTGGGTGAGCAAGCGGTCAGGGGAACTAGCCTGCTTCCTTCCGTGATAGGGAGCCACGCAGAGTGTGAAGGGGAGGTGGGGGCAGGAGGTGGGCAACCCTGGAAGTGATACACTTGGAGATTCAGGAAACATCTGCAGGGCAGATGGCCTGGGACAGTGGCCCAGATCCCCTGAGTGAGAGGATTAAACACACAGAACCTAGAGAAGAAGCAAAGGCACATGTTGCTTTGTTTTGGTTTTTTTCTTGGTATGTCTCTTCTGATAGCTGAATTGAGATAGAATTCACATACTGTATATTTCACTTACTGAAAGTGGACCATTCTGTGATTTTTAGTCCAAAACAAAGTTGAGCAACCATCACCTTAGGTTTAGAATATTTTCATCACTCCTCAAATCAACTTCATATCTATTAGGAGTCACTTCTTGAGGCCCCGCTAAATCTCTCGCCCTGCCCTTTCACTCCCAACCCCTCACACCCCGACCCCCTCCACTCTAAGCACTCACTAATGTACTTTCTGTCTCTGTAGGTTTACATTGTCTGGACATTTTGTGTAAATGGCCCACTTTGGTTTTGGTTTTAGTTGGCTTTTTTTTTCCACCTTTTTTTAAATTGGAAGGTGGGTGGGTGACCACTGAAGAGTCTTATAAAGGTGGGTTTGGAACATTAGAAGTTGAGAAGCTCTTTTGGGGAGACAAAGGTGACAGGAAAGCAGAAGAGAGAAATAACTTGCATCTGTTTCATTTTTTTTAATTTTATTTATTTATTTTTGTGCTGAATCTTCATTGCTGTGCTGGATTTTCTCTAGTTGCAGTGAGTGGGGGCTACTTTTCGTTGTTTGGTGCAAGGGCTTCTCATTATAGTGACTTCTCTTGTTGAAGAGCAAAGGCTCTAGGGTCCACGGGCTTCAGTAGTTGCAGCACGTGGGCTCAACAGTTGGGTTACTGGACCCCACAGCACAGGCTCAGTAGTTGTGACACACGGAGTTAGTTGCTCCACGGCATGTGGGATCATTCAGGATCAGGGATTGAACCTGTGTCTCCTGCACTGGCAACCGGACTCTACCATTGAGCCACCAGAGAAGCCCTGTTTTATTTTTTATTGCTCTATTTCTTCTTTTTTTTAAAGCCACCTCAAATGTTGGGAAGAGAGAAAATCTAAGTAAATGAAAGTGAGGAATGCTACAAATTGTCTGCTTTTATTTCTGTGAGCAATTTCTTTACCTGTTTTTGCAGTTATGCCTTCCCCTTGCCAATACTGTAACATGTAAAGAGACCAATCATGGAGTCAAGTCAGGAAACATGGTTCCTCCTATTAGCAGCCTGACTCAGCTACTTTCAAGTTCTCTCTTCTGTAAAATGAAGGGGTTAAAGATTATTTCACCCTTTTCTCCAGCATCATCTCCTGAGTGGCAGGCAATCAGCCTTTTCGGTATCTGTTGATAGTCCCTATTTTCTTTTTAGGTGCCATTACAGACTTTTCCTCCATTCCTGGAATTTCTAGGTACAGAATGTAAGGAGGATGAGAAGATAGCCATGTAACTTGCTTAAAATTTATATACTAGGTCAAACCTTTATGAAGAACTTTACACGTGCTACTTGGGCTGTTTCACAGCTAGTAAGGAACACTAGAAGGGACCTTAGAGAACATCTAGTTTAATCCCTTCACTTCAGTAGATGGAAACAGGCCTAGAAATAGGATATAATGCTAGAGCGGGGCCCAGTTCTGTAGCTTCCCAATGCCTATTCGTTTACATTAGAGGAAATCGAAGCCCAGGGACTTCCATGAAGAATAGGGCCTATCAATCGAGGCAGGCTCGTTGATCACCTAGAGTCCACTCCCTCTTTTAACAGCAGTTTAGAAGAGGTGCAGCCCCGGCCAGTTTTCTCGAAATTTACTGGAACTGGATCCAGACCTCCGGGCTTGCACTGTAGCATGAATGAATGTAATCGTAGTGGTTCTGCCAACAGAGGCACCTCTCCCTGCGTCAGGCCCGGGCGATTACTCCTGGGGAGGATTAGGTGTCCTGGTCTTTGAGGTCCCCTTCCCAGGCAGGCGTCTTCTAGGTCCCCGCGTAACCCCAGCTTGGGGTGCAGCCCAGTTGGGTTGGGGGCGTGGCCCGCAGCTGCGAACCAATCCCAGGCCCCACCGTAGGTAGAGGCGGGAGGTCCGCTCCCCACCCCGCCCATTTTCCTTTCAACAGCTGGAATGCGGGGTGGTGACCTAGGCAACCGCCATAGCTTGGCGCCCACCTGCCGTTTTCGCTTCGTCACGCCCCTCTTGGAACAACCAATCGGAAAACGAAGTCCTTTAAGGGCCAAAAGAAGAAAAAGGACGGCGATTTTGATTGGCTGATTGGAAGAGTCAAGTACAATCTCTGGCTTGACCCTGGGGCTGAGGCTCCGGGATCTCGCCCAATTTGGAAAAGGTTGGAATTTGGCCATCAAGGGATAGGAGCCCTAACCACTGGGCCACCAAGGAATTCCCCACAATGCCTTCTAAAGTTCTGCATGAAGAAGCATCCTGTTTACCAAATGTTTACTGGACAGAGAAAAAGAAAGAGGTTCTTAGAGACCTTTTCTCCACAAGAAAGGCCTCCAATGCTAGGAATGGTCAGCCAGGCAACATAACAGTGATTATAACACTGAATTCTGGCTTTATTGAGCACTTACCTTTTTCTAAGCAGCATTCGAAATACTTTCTATTCATCAACTCATTTAAGCCAACAACTATACAAGGAACAAGGGAAATACCTTTTTTTTTTTTTTTTCTTTAAAGGTTTACTGAAGGGCCAACCAAAGAGAACAGGCAGCTTTTGCTTAAAAAACCTGAACTTGAAGATACCATTATTAGCTCCATTTTGCGGGTTTGGAATCTAAGCTGAGAGATGTTGGTTGGGGTGTGAATCCAGGTTGTCTGGACTCCAGAATGTGAGCGCTTAATGTCACTCTCTGAAAGCCATGGTTTCAGACTGCCCTGGTGATCACGTGGTTAAGAATCTGCCTGCCAAGGCAGAGGACATGGGTTCCATCCCTGATCCCCCATGCAGAGGAGCAACTAAGCCCATACACTGCAGCTACTGAAGCCCGTGAGCCCTAGAGCCTCTGTTCCACAACAAGAGAAGCCGCCAAGATGAGAAGCCAGCACACCACAACTAGAGAGTGGCCCCTGCTCACTGCAACCAGAGAAAGCCTGAGTGCAGCAACAGAGACTCAGAACAGCCAAAAATAAACAAATACTTTTTTAAAGGTATAGTTATACAACATAGTAAATCAACTATACTTCGATAAAAAGTTAAATAAAAAAATAAAAGGTGTATTTCACAGTGAAGGGGCTTAATTTCTTCTGTGTTAAAAACAAAGATCCATTCAATAAAATATTTAGTAATACAAGAACAAGAAAAACAATTTTATTGGAAATATTCTAACACGTTTTCTGAACAAATAATCAAAAAATAAATAAGGACATAAAAAGATAGGAACATATGAAATTTTGACCTTGAAAACAAATAGTGTACCTTCATTTCAAGTTTCATGGACAGTGACAAACTGCAATAAATATTAAACTACAGAGAATATTTTGGTAAATTTTGAAAAATAGAAATTCTAGAAGTCAGTCTCAGATCGAAATGCAGTACAACTAACAGTAATATAAAACACACCACTCAGAAACTGAAAACCATAAATAACATCTCAAATTACCCTTAGGACAAGAAGTAAATCAAGGATAAAAAGCAAACTATTTGGGGATAATGATAATCATAATAAAAGGATA TCONS_00146724 TCONS_00146725 r 5' 660 TCONS_00146724 TCONS_00146725 r 5' 660 EMBV3_15547 AGTGCCCTAAAAGCGATTTTATATGCCTCACTGGTGGTTGTTGTTAGGTTTTCCCCTCAC Gene BVT0101_013083 + 0 NULL GK000011.2:73307413-73335432 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028451 TCONS_00028449 TCONS_00028453 TCONS_00028452 TCONS_00028447 TCONS_00028455 TCONS_00028454 TCONS_00028448 TCONS_00028450 1 XLOC_015477 Coding TCONS_00028449 XLOC_015477 Coding Coding RAB10 11:73334159-73392303 j TSS19958 2925 1 TCONS_00028449_1 118 6 0.949796192146948 1.93046509855856e-17 0.00449509942969705 3.76075491376234e-08 0.0010322859377958 0.00303029319480958 0.00146438375808739 0.0094365506247381 0.00903099460049335 0.017436542755735 0.00486895169484539 0.00051413397647593 0.00024309772928719 0.00126326528201605 0.00465957278416482 0.00483847484133945 0.00929711419179195 0.0144020605142987 0.0143724025138668 0.00357509625377057 0.00205677242745345 9.50968529161578e-25 0.00524690200786244 0.00384459536397303 0.00906626716482611 3.92158508201955e-21 2.43172494454211e-16 0.000403090283754436 0.00197509835476886 0.000310013393113574 0.00088073779038892 NM_001101288.1 RAB10 Bos taurus RAB10, member RAS oncogene family (RAB10), mRNA. 0.0 2978 100.00 0.564102564102564 NM_016131.4 RAB10 Homo sapiens RAB10, member RAS oncogene family (RAB10), mRNA. 0.0 4024 90.85 0.998290598290598 TCONS_00028449_1 sp|P61026|RAB10_HUMAN RAB10_HUMAN Ras-related protein Rab-10; 2e-83 246 100.00 0.991525423728814 1 coding 1 1 1 1 0.678304410733382 0.134821909035767 -0.0174751543039642 0.726785498371812 GGACTTTAAGATCAAAACAGTTGAATTACAAGGAAAGAAGATCAAGCTACAGATATGGGATACAGCAGGCCAGGAGCGATTTCACACCATCACAACCTCCTACTACAGAGGAGCAATGGGTATCATGCTAGTATATGACATCACCAATGGTAAAAGCTTTGAAAACATCAGCAAGTGGCTTAGAAACATAGATGAGCATGCGAATGAAGATGTGGAAAGGATGTTACTAGGAAACAAGTGTGATATGGACGATAAAAGAGTTGTACCTAAAGGAAAAGGAGAACAGATTGCAAGAGAGCATGGTATTAGATTTTTTGAGACTAGTGCAAAAGCAAATATAAACATCGAAAAGGCATTTCTCACATTAGCTGAAGATATCCTTCGAAAGACCCCTGTAAAAGAGCCCAACAGTGAAAACGTAGATATCAGCAGTGGAGGAGGTGTGACAGGCTGGAAGAGCAAATGTTGCTGAGCGCTCTGCTGTTCCATCAGTTGCCATCCACCACCCTGTTTTCTCTTCTTGCTGCAAAATAAACCACTCTGTCCCATTTTTAACTCTTAAACAGATATTTTCGTTCCTCATCTTAACTCTCTAGTCCACCTGTTTTATTTGTTGTTTCATCTGTGACTGCTTGCTGACTTTATAATTTTCCTCAAACAAAAAATGTATAGAAGAATCATGTCTGTGAGTTCATTTTTAAATGTACTTGCTCAGCTCACCACTGCATTTCAGTTGTATTATAGTCCAATTCTTATCAACATTAAAACCTATAGCAATCATTTCAACTCTATTCTGCAAATTGTATAAGAATAAAAGTTAGAATTAACAATTTTATTTTGTACAACAGTGGAATTTTCTGTCATGGATAAATGTGCTTGAGTCCCTATAATCTATAGACATGTGATAGCAAAAGAAAAAAGCCAGGAAAACATTCATTTTCGCCTTGAATATGTAAATGGGATTAATTTTGTCCTGTGCCTTATGTGGAAAGGAACTTCTTTGGTTTTTCCTTTTTTTTGTTGTTTTGTTTTGGTGGAAGCATGTGCAGGAGACATATCATCGAAACATAAAGCATTAAAATGTTTGTGGTTTGCTTGGCTGTAATTTTCAAAGTAGTTAATTGAGGACAAAGGATAATACAGAAATGATCGCTTTGGTTTGCTGAGTCTCATTTTAAGTGGCCTTGATATTTAAAACTATTCCTGCCACCAATTCTTTTCCTTGGCCACTTTTTCCTCGTGTCTCTTCCTGCATGCTGCTTTATTTGCTTCTTCCCCACCACCCTGTGGTATGAGTTATTTAAAAATGAAAGGGGTAAACTAGTGGGTTTGTGGAGTTTAACATAAAGCACTGATTTAACTTGCTAAGTAAACTGAAAGATAAATCCTGACTGCCTACTATCCAATGTCAGTTAACCGTGTCCTCCCCTTCATTTTCTCAGTCCCCTAAAGCTTCTGTCCCGGATTCCTTCATTTGCTCTTGACTTCACGTTGCTCTTCTCTTCTCCCGCTTTGTTCCCTTCCTGTCTCCATTGAGTTTATGAAATGGAAGAGTTAATTGCATGCACTAGTGTTTGGAGGGTGTTGTGGTTTGTCTTTCTAACTAAGTGTATAGCCTATTCACTTTCCTAGAATAAATATCTTAACCTAAATTTGAATAGTCTCCATTTTGGCAACTCCTCTAGCAGTTTGGTAGCCCAAAATTGTTTTAAAAAGGTGGGAAGGAGGAGTGAAATTTATTAACACGTTTGCCAAATATATTGAGATTTGGCCTATGAAGAACACTTTTTCAGTGTTAAGTTGTCTTTACCTTAAGATTTAGAAGTACTTTAGGCTGTTACTGATTTTAAGTCCTGTCTTCACATCCCTTTGGGAAACTTGTATTACTCTGGATTTGAAAAAAAAGAACAACAAAGGCTTTTCATGTAAAGATAAGAAACTCTAGGCTCTCTCTTGCCCTGCCATTTTTTCCCCTTCATTTTTCTAGTTTTGCTTTACTGCTTATCATTAGGGTAGGGTAAGTTAAGTTTGCTATGCTGCTAGCATCCTAAGATGATACCTTTGTTGAAATAATTGTGAATAGCATGATTCATTTCTAGCAGAGGCTGAGTTTAGGACAGCAGCTTCCATTGAAAAGTCTTTCTGTGTCGTGGATAGCATTTTAATGACCTCTTGGCTCACGTAAACAACACAGGGACATATCTGCTGTGAACATCCATGAATTTTCAGATAGTGCCCTAAAAGCGATTTTATATGCCTCACTGGTGGTTGTTGTTAGGTTTTCCCCTCACTTGACTTTATCATTGTTTACTACTAGTAAAAGCAGCATTGCCAAATAATCCCTAATTTTCCACTAAAAATAATAATGAAATGATGTTAAGCTTCTCAAAAGTTTTAGGTTAAACCTATTGTTGTTAGATTAATTTTTAATGTGTTTGTTGTTTTTCTTTATCTGGAATGTGGCAGTAGCTTTTTTACTTTTAACCCTCTTTAATCCTTACTCAATTCAGTGACTTAAGGTTTGAGAGCTAAACACTGGGATTTTTGGGTAACAGACTGACAGTTTTGTTGTTTGCAATAAATTATAATCGGCATTGTACATAGAAAGGATATGGCTACCTTTTGTTAAATCTGCACTTTCTAAATATCAAAAAAAAAAAAGGGAAATGGAGTATAAATCAATTTTTGTATAACCTGTTTGAAACCTGAGTTTTATTTGCTTAATAATAGGGCTTTGCCCCTTTTTCTGTAAGTCTCTTGGGATCCTGTGTAGAAGCTGTTCTCATTAAACACCAAACAGTTAAGTCCATCCTCTGGTACTAGCTACAAATTCGGTTTCATATTCTACTTAACAATTTAAATAAACTGAAATATTTCTAGATGGTCTACTTATGTTCATATAAAAACAAAACTTGATTTCCAACT EMBV3_33466 CACCCAGACAAGAAGCGCCAGTAAACCGGGGAGAAGTGGTTATACAGACTAAGGTGCAGT Gene GeneID:100138359|LOC100138359:XM_002693561:228_cdna Constitutive 0 NULL GeneID:100138359 15 GENE LOC100138359 NULL similar to histone cluster 1, H2bd EMBV3_23588 TCAGACTTGGCCTACTTGTACCACCTTGCTTCACACAGGTGAGGAGGACGCAGAACAGTT Gene GeneID:509430|SRP72:XM_002688265:197_cdna Constitutive 0 NULL GeneID:509430 6 GENE SRP72 NULL signal recognition particle 72kDa EMBV3_40654 CCCCAGATTGGACCACAATGTAGCTCAGCTTTGGAGCATTTTCCTGTTTGTTCCTCAGTC Gene GeneID:404074|ALOX5:XM_002698975:138_cdna Constitutive 0 NULL GeneID:404074 28 GENE ALOX5 NULL arachidonate 5-lipoxygenase EMBV3_20794 CCCGGGATCTCTATGTGGAGTTGGTGTCTTGTTGCTACCTCAGTGGTGCTATGTGTTCTC Gene GeneID:512400|LOC512400:XM_002698777:13_cdna Constitutive 0 NULL GeneID:512400 28 GENE LOC512400 NULL similar to olfactory receptor Olr601 EMBV3_39567 TGGTCCACCTGGCACCCTTAAGCAAAATCTCTGGAATTCGTTGGTCCACTATCGGGTCTT Gene GeneID:100336631|LOC100336631:XM_002699377:328_cdna Constitutive 0 NULL GeneID:100336631 29 GENE LOC100336631 NULL HRAS-like suppressor 2-like EMBV3_32212 TCCCAATTTTAAACTCAGGCGGGGACACATTTCTGTTTCTACCTGGATGGACGAAGGGCC Gene GeneID:532551|GLB1L:XM_002685581:179_cdna Constitutive 0 NULL GeneID:532551 2 GENE GLB1L NULL galactosidase, beta 1-like EMBV3_34316 CCTTTGGTATTTTTACAGAAACCCAGAGACCACTGACTCCTATGCGGTGCCAGCACTGTG Gene GeneID:539914|XKR6:XM_002689467:35_cdna Constitutive 0 NULL GeneID:539914 8 GENE XKR6 NULL XK, Kell blood group complex subunit-related family, member 6 EMBV3_01031 ATGATTCGGCAGATTTACGCACAGCTAAAGCACTCTCAGAAGCTAGAAATACAAACCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25277 CAGTCTTGGCATCTGACCTGAGCATACACTGTCTGGAACACTGACCACAATTCACTGCGG Gene GeneID:523515|GABRA5:NM_001075844:26_cdna UTR3_Alt 2 NULL GeneID:523515 21 GENE GABRA5 MGC139683 gamma-aminobutyric acid (GABA) A receptor, alpha 5 EMBV3_28498 CGGGCACTGTTCCTGCTCAGCAAAGGCATGGTAAAGAGCGTGAAGCCATGCCTGAAGCAG Variant GeneID:528175|LOC528175:XM_002688519:87_cdna 580^735 1 EMBV3_36930 GeneID:528175 7 GENE LOC528175 NULL similar to Uncharacterized protein KIAA0892 EMBV3_05339 TGGCAGAAGACATTGAGAAGACCATGAGTACGGCTCTGCACGAGCTTCGAGAGCTGGAGA Gene GeneID:512892|SRGAP3:XM_002696887:339_cdna Constitutive 0 NULL GeneID:512892 22 GENE SRGAP3 NULL SLIT-ROBO Rho GTPase activating protein 3 EMBV3_04024 CCAGGAAGTCAGGCACAGCTGGAGAGAATGTGGGATGCAGGGAAATGTCTTCTTGCTTGA Gene GeneID:528939|LOC528939:XM_002694315:40_cdna Constitutive 0 NULL GeneID:528939 17 GENE LOC528939 NULL similar to CG3558 CG3558-PA EMBV3_10655 CTGGGGGCGACTGGGGGTAAATATGCCCTCTACAGACAAACTACAGGAGGTAGATCTTGA Gene GeneID:281731|GZMB:NM_174296:7_cdna Constitutive 0 NULL GeneID:281731 21 GENE GZMB BDMD1 CTLA1 granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) EMBV3_24999 CCTTGGAGCCAGCACACACAAGCCCCCAGCTTCCGCAGAGAAGTTTATTGATGCCCAGTT Gene GeneID:614852|INO80E:NM_001046544:404_cdna Constitutive 1 NULL GeneID:614852 25 GENE INO80E CCDC95 MGC137340 MGC159449 INO80 complex subunit E EMBV3_32839 CCAGGCCCTGGCCAGCGGTCAGATTGCAGCTGCCACCCACAGGACCCGAAACATCATGTC Variant GeneID:504764|GRHPR:XM_002689718:25_cdna 820^912 4 EMBV3_33995 GeneID:504764 8 GENE GRHPR NULL glyoxylate reductase/hydroxypyruvate reductase EMBV3_17524 GAGAAAAGAAGGTGTTTCAGGCTGTCTTCTCCTGCTCTCCCACTCTGAGACCTTTGCTTG Gene GeneID:768256|DECR2:NM_001078122:330_cdna Constitutive 3 NULL GeneID:768256 25 GENE DECR2 MGC128381 2,4-dienoyl CoA reductase 2, peroxisomal EMBV3_09602 ATGGAAGGGGTGGAACTGTGCACTAAAGTGGGGGCTTTAACTGCAGTGTTTGGCAGAGTT Gene GeneID:540786|PTEN:XM_002698370:158_cdna UTR3_Alt 2 NULL GeneID:540786 26 GENE PTEN NULL phosphatase and tensin homolog EMBV3_42700 TCTCAGATGCCATTTCTCGGCCTGTGGGCTTTGGAGATGACGTGGATGAGGATGAACTGT Gene GeneID:613647|CHMP4A:NM_001128504:263_cdna Constitutive 0 NULL GeneID:613647 10 GENE CHMP4A NULL chromatin modifying protein 4A EMBV3_41775 GTCACAGCAGTTTGCACAACCTCCAGGAGCTACTAATATGATAGGTTACATGGGGCAGAC Gene GeneID:514323|DDX17:NM_001101993:64_cdna UTR3_Alt 2 NULL GeneID:514323 5 GENE DDX17 DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 EMBV3_40133 AATCCTGAATTAATCTTTAAACACTTTCAAGTATTGCAGTTGGACACATATATTTTTTCT Variant GeneID:508465|DERL2:XM_002695769:252_cdna 181^544 2 EMBV3_03832 GeneID:508465 19 GENE DERL2 MGC127058 Der1-like domain family, member 2 EMBV3_23512 GCCCAGAGACAGGGTCAAAAGTATCACAGTTGGCCTCTTGGCCTCGGGTGGACACAGAAT Gene BVT0102_193253 + 0 NULL GK000007.2:16052667-16054554 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212005 1 XLOC_130064 Coding TCONS_00212005 XLOC_130064 Coding Coding ICAM4 7:16051823-16054407 j TSS159188 2328 2 TCONS_00212005_1 266 3 0.0998838559814169 0.000209703001217616 0.000376193022815096 0.000791993724711248 0.000228292737166995 0.000364774525744258 0.000352468189087039 0.000722249119572918 0.000980549116912524 0.000311384176435112 0.00015022884117437 9.83328801077933e-07 3.98232937712034e-12 8.98795404149285e-05 0.000182487777036115 0.000123217194568717 2.26903971806465e-05 0 0 0.000813196304970505 0.000915081275464179 0.00039641795206703 1.06252363180774e-06 0 1.26806507157714e-11 0.000389865624755377 0.00120955332821485 0.000592201408548775 0 1.13294185633745e-05 2.06605896234324e-05 XM_592787.4 ICAM4 PREDICTED: Bos taurus intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) (ICAM4), mRNA. 0.0 1651 100.00 0.392611683848797 NM_001544.4 ICAM4 Homo sapiens intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) (ICAM4), transcript variant 1, mRNA. 4e-175 619 75.47 0.379295532646048 TCONS_00212005_1 sp|Q9ERM2|ICAM4_MOUSE ICAM4_MOUSE Intercellular adhesion molecule 4; 6e-117 340 70.16 0.928571428571429 1 coding 0 0 0 0 0.0137884650806928 0.896812006150937 0.00585274123397253 0.921772758336338 CCAGCCCTTCAGTCCGGGCTTTTTGCCATGGGGTCTGTGCTCCTCGTCTTGCTTCTGCTTTTGCTGTCGCCCTCCTACCCACGAGGCGGGAGCGCGCGGAGGCGTCGGGGTGCGCGGACGCAAAGCCCGGGGGGCAGCTCTCACCCACAGTTCTGGGTGCGCCTAAGCCCCGACTTCAAGGCAGTGCCGCTGGGGGGCTCAGTGTGGCTCAACTGCAGCAGCAGCTGCCCACTCCCGGAGGGTTCCAGCCTCCGCACCGAGCTGCGGCGGGGTGAGACGCTCAGTGGGCCCCGCTGGGTATCCTACCAGCTGCTGGATGTGAGGGCCTGGAATTCCGATGTGCACTGCTTCGTCACCTGCGCGGGAGAAACCCGGGGGACCACGGCCAGGATTACAGCCTACAAACAGCCAAGCAGCGTGATCCTGGAGCCTCCGGTCTTAATGGGCAGTGACTACACTCTGCGCTGCCACGTGACACACGTCTTCCCCGTGGGCTTCTTCGTGGTGACTCTGAGGCGCGGTGGCCGAGTCATCTACTCCGAGAGCCTGGAGCGCTTCACCGGCCTGGATCTGGCCAACGTGACGCTGACTTACCTGTTGCCCTCCCGGCCCGGTGACTTTGGGCAGCCCTTTACCTGCCACGCCCGCCTCAATCTGGACGGCCTGGTGGTCCTCAGTAGCTCGGCACCCGTGACGCTGCCAGTCCCCGCTTGGAGTCCTGCGTCCATAGCCTTGGCCTCTACCTCCATCGCAGCCTTTGTGGGGATCTTTCTTGTCGTGGGGGCCCTCTGTCTGCGAAAGTACCTATCGATGCAGCCTCCGGCATAGAGGCATTGGTCCATGCAGGCTGAACTGGAGGAAAAAGCAATCTGGGACAACTGGTGGAACCTTGCCTGGATCAATAAAGACTTTCTCAGCCAGCTCTGCCCCTGGGCATAAAGTTCCCCCATTAGGGCATCTCCTATGACTGAAGTGGTCTTCTTTTTTGGCCTAGCCTCTTTCATTTTTCTCCAAGTTGCCTTGTCTCCCTGAGGGCCCTTGAGGTTTCCTCACTCTAGTCTCCCATACGGGAGCCCCAATCCCCCTGCACTGCCAGCTTGTGTAGTAAGAACCTCTCTCCTGGTCATTATCAGTGAGGAGCAGAAGGGCAAAACATGGGCCCTAGGGGGCTTCAAGATCTGAGAAGGCTGCTTCCTGGTGTGGCTTCTTCTGATTGGCTCCAGCGCTGCCACACAGCAGCTCTGATTGGATGTTAAGTTTCCTACCCCGCCCCCTTTAGACCTTGCACTTTACTGGAGGGCAGGGGCGGGGCGAGAAGTAATCCCCAGAGTTCACCATTAGCTCTAAGAGGGAGGGTACAGGTGGGCGGGGTCATATGTATATTTTGAGGGACTTGGATCTGCAGAAAAGATACCCGGGTGGTGACTGAGAAGGTGCAACCATATGGTGTGTGTGTGGGAGGGGGCGGGTGTGTGTCACAGACTCACAGCCTGGAAACATCCTGATAGTCACCCGGCCAGATGGGCACATGGAGAGCGTCCAAATCTGGGGCCCAGAGACAGGGTCAAAAGTATCACAGTTGGCCTCTTGGCCTCGGGTGGACACAGAATCCAGACCTGCAGCGGATGCCTGGCGAGGCCCGTGTGGTCCAGGGCCCCGCCCGCCGCGCAGAAAGCGGATGGGGACGCTCTTCGGCGGCTTCAGCTCACACACGCCGCGCAGACACGTGCCTGCTGCACGCTGGGTAAATACAAGACCCAGAGCCGAGCCGACCCTAATTTAGACGCCCGAGAACGCAGCGAGCACGCACACGTGTTCCCAACTCGCTGTCACTTTCGTCCCCGCCCCTTCTGTCGCGTGCGGGGGCGGAGCCAGAGAAAGACTAGAGGCGTGGCTGTAACTCTTAGCTCCCTGGGGTTAAAAGGGAAAGGATCAGTGAGCGAGCCATCTCGAAATCTCCTAGAACCTTTCCACCCCCAGCTTCCGCTTCTCAGATCTCTCCTAGCCCCCAACTCAATCCCCGCTTTCAGGGGCTCTGGTGGGAGGGATTAAATATGGAGATGGAGTTCGGAGTCCAGCTCATTATGGCATCTAAGCAAGTGGTGGGTGGGGGTTTGCGAAGGACAACCCTGCATCCCCCACAACCTTCGCGTCGCCGCCGGGGATGACGCGGGAGCGTGCAGCCGCCCCCAGAAGGCTCCGGGCGATGGGGCCGGCCTCCATGTAGACCCCGGGGGTCGCTAGCACCTGCCAGCACGCCTTCACCAAGGCCGGTAGCCGGGTGCAAGCTCGCCTTCCCGCCCCCTACCGCCGCCTCTGCTGCCGCCC EMBV3_37996 CAACACTGAGAGGGAGAAGAAAAAGGAGGAGTGAGTCAGAAAAGAGGGAGATCCTGCTCC Gene BVT0102_329194 + 1 EMBV3_35331 GK000023.2:28156381-28167349 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134659 1 XLOC_081477 Coding TCONS_00134659 XLOC_081477 Coding Coding C23H6orf136 23:28152660-28160372 j TSS100324 4777 1 TCONS_00134659_10 315 0.0249110320284698 8 0.381532875113474 0.000375898671108985 0.00102417548365326 0.000330659764632556 0.000286829409965631 0.000129618457932225 0.000433560036327499 0.000225438961846682 0.000390760659959306 0.000250274424856827 9.24131231343817e-05 5.69173272396269e-06 1.24046812969169e-05 3.15338707889326e-05 0.000397823466808459 0.000222696966265225 0.000318988556856765 7.71034810888953e-05 0.000239196710500429 0.000427461724011114 0.000315081192807881 4.21136910468172e-06 9.58730331988934e-05 5.80804633282703e-05 0.000215372855589783 0.000900726000318777 0.000341384705324147 0.000483611706235815 0.00013292837816006 2.6938966817607e-05 3.9170929041842e-43 NM_001038178.2 C23H6orf136 Bos taurus chromosome 23 open reading frame, human C6orf136 (C23H6orf136), mRNA. 0.0 2212 99.92 0.25706510362152 NM_001109938.2 C6orf136 Homo sapiens chromosome 6 open reading frame 136 (C6orf136), 0.0 1548 85.92 0.273812015909567 TCONS_00134659_10 sp|Q32KT5|CF136_BOVIN CF136_BOVIN Uncharacterized protein C6orf136 homolog; 0.0 629 99.68 0.996825396825397 0 coding 0 0 0 0 0.0561011392452063 0.855360224934615 -0.00312569220624026 0.946055445519129 AGCAGGAGCTGCTGCGTTCCCTGCGCCTCTGCCCCCCACACCCCACCGCCCGCCTTCTGCTTGCTACTGACCCTGGGGGCAGCCCTGCCCAGCGGCGCCGCACCAGGTAACAGGAGCTGGAGAGTTAGGGAGCCTCAGGACTGTCAGACAGGGCGGTTAGAAATGGCAGAGGGCAGTGTAAATCAGAGACATGAAGCATTGGGACAGGAGGATTGGAGACTTCCTAAGACGTTTTGAGAATATACTGGAAGATACCTGTGGAAATAGTCTGGAAATAAATTACAGTTAAGGAGCAGAATAGGACTTCGGGGGAGCCTAGGGATGCTAGTGCCTAGAGGAAGGTTAGAAAGAACGCAGACCCACTGGTGGGAGGGGCGGGAAATTGTGGTTTAACACTTGCTGGGAGGGGGCAGGGTCTCTGACAGCCTGGGGAGCCACTGGCCCCGGCTCAGTGCCTTGTGTGGCGGGAGCCCACCCCGGCAGGCAGGGACTGGGCCTCTCCTTTATTTCTCTCCCCAGCTTTCTCTTCACCTCTGACTTCTCTTTCTGTTTTTCTCTCCCCTCCATTTTCCCTCTCCCCCTCTCCTGTCCATAACATCCTTCCCCAGTTCTCTTCCCCGCTCTGATGAGAGTCGATACTGATAGACTGCTAACCCCCTCCCCTCCCTGGGAGACCTGGCGAAGGTGGAGACCCTTCTCCCTGAGAACCCCAGACCCAGTCTCCCACTGCATCCCCCAGCATCTAGGGGGACTTGACAAGAACCCGTAGGATTCCCTTTACCCCTTTCTTGGACAACTGGGTGGTCAGGGTCCCAGGTGGCCTAACACTTCATAGCTTTTCTTACCACAGAAAGCAGCCCTTCTCTCCTAACTTGGGCTCTGAACACTCCCACAGACAGCCCGATTTGCTGCCAGGCCTCTTGGTTGGGCAGCTCATACTAATTATCCAGAGAAGCACACTCTTGCTTGCTGTCAGATTCTAGAACATCATGGAAAGTCCAAAGGCCTCCTCTGCCAGGGAAACCTTTGTAAAAGAGTCTTGTCCATGGAATAACTCCTGTAGTCCTCTACACTGTCTGCTGGTAGTTCTAATACTGCTTTGTGCTACCGGCTGCAGCTACCCTATCAGCCTGCTGACGCCAGCCACTGAACGAACTCTGCTTCATAGCAGTCCAGTCAGGTAGGACAGGGACTTACCAGCTCCCCACGGGATCCACTCAACATTGCCAAACTCTTAATCTCCACGTTTCATGTATGTGTTAATCTGTCGGGACCCCTGAGCTGATGTCTGCTGTGGGACTCTAGACTCATCACGCTTCTATAGACACTACCACCTCCCTAGGTCCAGGTTCTCTGAAGGAGTCTGTTTCTTGGCAGTAGATCCCAGCCAACACCCTAGGATCACTCTTAGCCAAGTTTCAGCAGCTAAGCCTGAGTTTCAAGGCTCTATTAGCTCCTGGAATACCCTCTTACATCCATTCCTCCCCGGTAGCTAGATATACTGATAGATTCCTGTCTTGTGAGATTGTCTTGATGATGATGGGGGAACTCTTCCTCTGGCCTTCCTCTCTTCTTTCCTCCATAGCAAGAATCCTCCCCTGCTCCATACCCAGGCTATAGAAATCCTTTCCCTCCCTACCCTCTGGATGTGTGCTAGTTCAGGTACCCCTACTGTGTTCCCCCAAATCCTTGGGAGCAGGATCTCCCTCTTTTCTGACTCACTCCTCCTTTTTCTTCTCCCTCTCAGTGTTGTCTGAATAAAGCGTGAACTCTTTTGTGTTTTTTAAATGGACATTTTCAATGAAAAAACAAACAAACAAACCTTAAGGTCTCAGCCTCGTTTGTGCGTCACCCTGTATTTTCCTGGGATCTCAGGACCTCTGGCCCTCTTCTTCACCTCTGAGATCTGCAGATCTTCCAGCAAGGAGGCTTAGAGCTCCCCTCGCAGGATCTGGTGTCTGCCTGTCCCCATCTTCACTGCTGGATTTTCTCCTGCAGATTCTGTCTCCTCTAATGTAGTCACTGGATCCCTCCATGTAGGCTTCTGTATCTATTCCTCCATTCTCTCCATAAACCTTTAGCTCTCCCTCTAGTAACTCCTACTGTTTACCCAGGCCAGCCCTTGCTGAGATGTTAAGATTTACTAACATCTCTAGGAGCCAATTAATTGCCTTCTGATAACAATCCCCTAATTGTTTCTTGGATTATTCTTCTCTAAATCCTTTGATCTCTTTCTCAAGACAATCCTTTTCCTAAATTCAGCCTTGCCACTCCCTCTTCCCCTCTGGCTAAGATATCCCATAATTAAGGTAAACGTGTTTTCCAACTCAAAACATCAGAGCACCTGGTTCAGCAAAATTTTGCCTTTATGTGAATCCATTTTTTGTTTTTGGCTGCACTGTGTAGCTTGTGGGATCTTAATGTCCCAACCAGGAATGGAACCTGTGCCCCCCGCAGGGGAAGCACAGAGTCCTAACCACTGGACCACCAGGGAATTCTCCTGAATCTTTTTATAACATGATTTCGATCACATTTAACCTTACGGTTAGCACATTGCCTCAACTAGAAATAATAAAGCAGCAAATTAGGACTGCTCCAGAAAACCTTGGGGTATACAGTGCTCTCCCTTCCCTTTTCTGGGGCACAACTTGTATTAAACCCCATAGGAATGATAACTACCCCCTCTCTGTTCCTGTGCTGTTCTTTTATTCTTCTCCCCTGATTGCTCCATACCCACTCATCTTTCATCCTGTAGCCTCTTCCCCATCATTTCACATTTCTTCTACAGCGGGACTCCCCCAGGGCTGGTAGCCCAAAGCTGCAGCTATAGCCGCCACGGGCGGTTGAATTCCTCATGTCCCAATACAGGCAACCAAGAACTGAAGCAGGGGGAACAGGAAACAGAGAATAGGTGTGCCATTGAGGAGCAGGTCTTGTCACAGCATGGGTCTGGGGAGGAACCCATGCACACAGTTCCTCCACAGGCCCAGGTTCCACCAGCCCAGGCTTGGACAATGGGTGGGGACATGTTCAACGCCAGGTTCATTCGAAACTTGCATGAACGTCGCAGCACCAGGCCTTGGTGACCGCAGCCCCCTCTCACACCTTCAAAATCATTATTATTTCTATCTCACACAGGACTTAGTCAAAGCTTGCCCTCGCCGTGTATGTATTCATTCATTCATTTATTCATTCTACAGGCTTTTTTTTTTTTTAAATCAGTGCCAAGTCATTTGTATCTTATTTTTAACCAGAGCAATAAAGTATTTTTTACCACGAGCGTTACTGAGAACTGCGGATGTCGTTATTTCAGTCCCACTCCTCACCCATCAGCGCCCACTTTTGCGCAAGCGTACAGGTGAGAGCCTGAGAACCGTACTCTTAGGCCGCTAATTTACTGCGCAAGCGCCCTGAGGCTGCCTCCGATTCGGCGAGCGCAGGCGCACTTTCTGTAGACCTAGCGCCTCACCGCCTCCCTGGAACCCGCCGCAGTGCGCAAGCGCGCAACATCTCCGTTTCCCTCCCCTCAGCCCCTCACCCCCCCCCCCTTTCCCCTTCAAGAAGCCGGCTCCGGGGCGCGCTCACCCCTGTGAGGAGGCCGGAGGCCGGACACAGGAGACGCTCTCTCCGTTCCCGGAAGATCATGTACCAGCCCAGCCGGGGGGCGGCCCGGCGCCTCGGCCCCTGCCTTCGCGCCTATCAGGCTCGTCCCCAGGACCAGTCTTCTCCATGGGCTCTACCATTCCCACCCCTTTGGCCTCACTCCACAACCACCACTTCTCCATCTTTGCCTCTTTTCTGGTCTCCCCCACCCCCAAGCCCTCCCACCCGACTGCTTCCCCCAGCTCCCCCACTGCCTCTCCCTCAGGTCCAAGCCCTCACCTCACCATGGGTGGTTCTCCCCCCAGGAAAGGGGGAGGAGGGGCCAGGACCCGAGTTACTTAGCGGCTGCCTGGATGGGCTCAGGAGCCTGTTTGAGGGGCCTCCCTGCCCCTGTCCTGGAGCTCTGATACCTTTCCAAGCCCCTGGAACCGCCCACCCTTCCCCTGCCACTCCATCAGGAGATCCAAGTATGGAGGAGCACCTGGCTGTCATGTATGAGAGACTGAGACAAGAGCTTCCCAATCTCTTCCTTCACTCCCACGACTACACTCTCTACTCATCGGATGTGGAATTCATCAATGAGATCCTCAACATGCGTACCAAAGGCCGGACATGGTACATTCTGTCACTGACTCTCTGCCGCTTCCTGGCCTGGAACTATTTTGCACAGCTTCGGCTGGAGATTCTGCAGCTGACACGCCACCCTGAGAATTGGACCCTGCAAGCCCGCTGGCGGCTTGTGGGACTGCCCATTCACCTGCTCTTTCTTCGTTTTTATAAGCGTGACAAGGAGGAGCTTTACCGGACCTATGATGCCTATTCCACCTTCTACCTGAATTCCAATGGCCTCATTTGTCGCCATCGCCTAGACAAACTGATGCCTTCACATTCACCCCCCGCACCTGTGAAGAAGCTGTTAGTGGGAGCCCTGGTGGCTCTGGGGCTGTCGGAACCAGAACCCAACTTACACCTGTGTTCCAAGGACTGATCAGGAACTGGGGCAGAGGCAGCACTGATGACTTTGCTACGCACAAAAAGAGGCGGTGGAGGCAGCTGAGAGCCTCAGAGCCAGTTACCTCCCCAATTCGCTCTCCTCCTCTACTTTCCATCTCATGCTATGTAAAGCTGCTGTGTAATTTAACTTGTAAATAATAAAATCTACATGAATATATGA EMBV3_08926 GTGCTGCATTTAAGGTACTAGGGAGGCATGATACAAGTCGAGGACACAAGCCCTTCACAC Gene GeneID:522279|DENND2C:XM_002686106:110_cdna Constitutive 0 NULL GeneID:522279 3 GENE DENND2C NULL DENN/MADD domain containing 2C EMBV3_01202 CAGGGTTGGGTCACCTTGAAGCATTTTTTCAGCTTGGCTTATACTCTGCAGGGGAGTTGA Gene GeneID:536735|STXBP5L:XM_002684788:131_cdna Constitutive 1 NULL GeneID:536735 1 GENE STXBP5L NULL syntaxin binding protein 5-like EMBV3_13691 GGGTTCTATCCCCATTCCCGACACTTAATTTTCCCAGCTGTTGTATCTCAGAGTCCTCTC Gene BVV0101_025816 + 0 NULL GK000002.2:45822010-46412020 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12639 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05724 GAGACTTCGGAAACTGGAGTGAGCTTTGTCCTAAAGGCATATGCGGCTTGCAGACCAAGA Gene GeneID:526730|LOC526730:XM_002695774:266_cdna Constitutive 0 NULL GeneID:526730 19 GENE LOC526730 NULL similar to vitelline membrane outer layer 1 EMBV3_26288 CCAGGGAGAGACAATAGGAAGCCATGATTTTAGGTATGCAGAGTTCACATAGGTTTGCAG Gene BVT0102_066760 + 0 NULL GK000014.2:48634026-48825228 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41720 CTACAAACTGTACTTACTTCACAACTTTGGAAACTCAGCCTTGGGTTCAGCCCGCCTGGG Gene GeneID:508044|IL22RA1:NM_001034311:99_cdna Constitutive 0 NULL GeneID:508044 2 GENE IL22RA1 MGC127988 interleukin 22 receptor, alpha 1 EMBV3_34923 CTACAAGACCAAACGAGTCCTACCCCCTAATTGGAAATACGAGTCATCCACAGCCTCTGC Gene GeneID:535668|RPS13:NM_001025342:175_cdna Constitutive 0 NULL GeneID:535668 15 GENE RPS13 NULL ribosomal protein S13 EMBV3_19394 TCATCGTGAAAGCCATGAGTGATTACTGGGGTATCCAGCTTCATCTAGGTGGTCATGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14618 GCCCAAAGAGTAACAGCAGTGGACACCATCCAGAGGAAGATCATGGACCACATGAAACTG Gene GeneID:100337174|LOC100337174:XM_002685268:85_cdna Constitutive 0 NULL GeneID:100337174 2 GENE LOC100337174 NULL hypothetical protein LOC100337174 EMBV3_37214 ATCGGAGATGACAACTACCTGGCCCTGAAGAACAGCCAAGGCAAATACCTGCTCAATGGG Gene GeneID:514927|ADAMTS15:XM_002699237:199_cdna Constitutive 0 NULL GeneID:514927 29 GENE ADAMTS15 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 15 EMBV3_03341 GAAAGGGTCAGTGGACCTGGCTTGGGCTGTGAGAGAAGCTGCAAGCAAAGAAAGTCGTTT Gene GeneID:100336955|LOC100336955:XM_002690336:4_cdna Constitutive 0 NULL GeneID:100336955 9 GENE LOC100336955 NULL Monofunctional C1-tetrahydrofolate synthase, mitochondrial-like EMBV3_11195 TGGAAGTGGCCTATTTTAGGACCACAGATAGCACCTTATTAACATTTGAACAACTGTTTC Gene GeneID:534781|PBK:NM_001102178:58_cdna Constitutive 3 NULL GeneID:534781 8 GENE PBK MGC165897 PDZ binding kinase EMBV3_11133 AGGCCCGACACTTTAGGGACCACGGAGAGTTTTGCTTCACAGTTCCCATTGAAGGCGCCA Gene BVT0102_299418 + 0 NULL GK000025.2:27038836-27048342 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144919 TCONS_00144922 TCONS_00144921 TCONS_00144918 TCONS_00144920 1 XLOC_088691 Coding TCONS_00144920 XLOC_088691 NonCoding Coding LOC100847216 25:27043217-27044612 j TSS108713 230 1 TCONS_00144920_1 52 3 0.837159253945481 0.00198926974188617 0.00152309930399439 0.00130751381385388 0.000340293516183451 6.21888192395243e-15 0 0.000264577371548684 0.000260926936051454 2.35286156662749e-09 0.000768860740017784 0.000142175368571088 0.00296697665618004 0.00399737084072591 8.87062007889865e-12 0.000515619738086738 4.9057025075201e-05 0 0 0 0.000617816042069572 0.00012730002771162 0 1.76115680920826e-42 0.000127499268014011 0.000704196399219818 1.93840752234003e-09 0.00188173833541043 0.000129870913271825 0 0 XM_003584041.2 LOC100847216 PREDICTED: Bos taurus serine/arginine repetitive matrix protein 1-like (LOC100847216), mRNA. 3e-113 410 100.00 0.982608695652174 0 noncoding 0 0 0 0 0.0968898695758337 0.373717133735817 0.0033193183033636 0.946999209167845 GGAGGTCTCCGATGATGACCTCGACCCGTCCTTTACTGTCTCAACCAGCAAAGCCTCGGGCCCCCATGGCGCCTTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTCCCTAAAGTGTCGGGCCTGGAGCGGAGCCAGGAACAGCCCCCAGGGCCCGACCCGCTGCTAGTGCCTTTCCCCCCGAAGGAACCACCGCCTCCACCAGCCCCTCGGCCTCCTGTCTCACCCC EMBV3_23070 CTGGAAGACACAACAGTGCAGACCGAAGAGATGAGCATCTGGTTTTGAGTGAGAAGATGG Gene GeneID:540308|POLR3A:NM_001083750:389_cdna Constitutive 2 NULL GeneID:540308 28 GENE POLR3A MGC137470 polymerase (RNA) III (DNA directed) polypeptide A, 155kDa EMBV3_32230 CTTTAATGCATGGATCCATAAACTCTCCCTACCTGCATCAAGTGGATGTCGTGCCTCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28100 AATCTTTGCAACACCGCCGGCATGTCTCAGAACGTCCTGGAATGTTGGACTTCAAAGGCA Variant GeneID:768330|DBI:NM_001113321:29_cdna 134^251 1 EMBV3_19571 GeneID:768330 2 GENE DBI MGC140115 diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein) EMBV3_11096 GAAGTTCTCTTCAGAGTTACACTGTAAACTAGAGCTCCATTTGTGCCCTCCCACCCAGCA Gene GeneID:522372|SYF2:XM_002685769:573_cdna Constitutive 2 NULL GeneID:522372 2 GENE SYF2 NULL SYF2 homolog, RNA splicing factor (S. cerevisiae) EMBV3_16260 AGCACTAGTGGTCAGAGACGCAGAGGATAACATTCTCAAGCACGTCACTTTGAGACCGGA Gene BVT0102_341613 + 1 EMBV3_24783 GK000007.2:103932552-104321914 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214781 TCONS_00214780 1 XLOC_130767 NonCoding TCONS_00214780 XLOC_130767 NonCoding NonCoding - 7:104241014-104295276 - TSS160563 879 2 TCONS_00214780_2 49 3 0.983855808038923 0.00018123171741568 3.00423060207593e-08 1.70695304912203e-10 0.00085025420495233 0.00020428268750278 1.62776987995913e-05 0.000139323811519666 0.000251100744517718 5.60590364197464e-10 0 0 0 0.000525546023273258 1.0702872004855e-05 0 0 0 0 0 4.90880686842552e-05 0 0 0 0 7.88191829406849e-06 0.000593132582062513 1.33313702488407e-05 0 0 0 0 noncoding 0 0 0 0 0.0634016812308898 0.68356729711515 0.0038370924305086 0.935538511785761 CTGTGTGAATGAGCCGGGGTTTGTTTAGAAGCTGAAGAAGGTAATAGCTAGGCCACTAGAGACCAAAATGTGAGATCTGGTATCCCTGAGTTTTGAATAACACTGTCGTTCATTGATCCAGCATTAAGCCATCTGACTCACAGGACCCAGCAAATGAGCCTGGCTGGCGTGCCCTGCTTGATTTCCTAGGAAAGACACAATCTGTCACCCTAATCAATATTGCTTGACTTGAGGCCAGCAAAATAGTTTCTGTAGTTGTTTATGTCCTGTATTTATCTAGAGTTTTAGCCAATTCCTGGCATATGAACCCATCTGTACTAAGCACAAGATAATTTATATCTAGTCGTGGGTTTTAAACCTTCTTTGATGAGCACTAGTGGTCAGAGACGCAGAGGATAACATTCTCAAGCACGTCACTTTGAGACCGGAAACCTGAAATTACATCTTGCCGTGGTTCTCTCAAAGAAAGGAGATGGAAAGAAAACCAATCGTTCTCCTTCTTAGTTTTGGAATAACTTTCTGGAGGAAAACTAAACAGTATCTTAAGACCCTTATTTAGAAGAAAAAGACTTGTGGATCACCACACATTTCTTTGCAAGAGGTTTCATTTTGAGTATCTGATTGTCATGTTGACCTTGGGTGGGAAGTAATTAGACACGCAAGACTGAGCAACTGGATGGTTCAGCCTTCTTGCATCTGTGACTTGCTTCCTGGAAGGAACACTGGAACAGATGTCAAACTACAGTCAGGTGACCTCAATCCTGAAGACTTTCTGCTATCAACAGCTTCCTGATTTTGCATCTGACCTGGCCCATCTAGACCTGAGCAGAGAGGCTTCAGAGGGAACAATGACCTGGAGAGCAGAGGTTCTTCAACCTG TCONS_00214778 TCONS_00214779 s 3' 12910 TCONS_00214778 TCONS_00214779 s 3' 12910 EMBV3_05908 TGGGGTAGACTGCTGGATCGACAACACCAGGCCAGCAGGAGGAGTACTACCTGAAGCTTG Variant GeneID:510960|LCAT:NM_001046069:195_cdna 328^539 2 EMBV3_07923 GeneID:510960 18 GENE LCAT MGC137397 lecithin-cholesterol acyltransferase EMBV3_34417 TTATTTCCATCACTCCCCAAAGAAACCCCATACCTACTAACAGTCACGCCCCACTTCCCC Gene BVT0102_019253 + 0 NULL GK000003.2:3464943-3576687 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168238 TCONS_00168235 TCONS_00168236 TCONS_00168239 1 XLOC_103029 NonCoding TCONS_00168236 XLOC_103029 NonCoding NonCoding LRRC52 3:3445545-3483864 x TSS126196 1022 1 TCONS_00168236_1 39 0.524461839530333 4 0.97343285140143 0.00122831807497606 0.00101812558701162 0.0012094736735529 0.00137233571844541 0.00232436723376487 3.49984132501205e-05 0.000455700553370954 2.83342551705487e-06 4.09429612875792e-06 2.25521541847677e-06 0 0 1.41913875897261e-06 0.0002647538192332 2.0748359599133e-06 0 0 0 0.000539436392859028 0.00241513181599327 0.000613016858278299 0 0 0 0.000818852001675539 0.00513387843860226 3.00589152029772e-06 0 0 0 XR_238595.1 LOC101905766 PREDICTED: Bos taurus uncharacterized LOC101905766 (LOC101905766), 4e-113 412 93.41 0.26614481409002 0 noncoding CAGGTCCAAGTAAACAAGGTCACTGAGGAGTCCTAGATTCATCGCTGGCAAGAAACGGATCTTGTTATCATTCAGAAGAACTGAACAGAAGTTGAAGCGCCAAGCCGGGTGCCCCGGTGGCTCTGCTGGTTGCTCACTCCCAGACTGCTGCTGGAAGCCTGCCTGCTTGCCTGCGTTTACAGTCCTGCTGCTGCTGCTGAGTCGCTTCAGTCGTGTCCAACTCTGTGCGACCCCACAGACGGCAGCCCACCAGGCTCCCCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGCTACTATCTCCTTCTCCAATGCATCAAAGTGAAAAGTGAAAGTGAAGTCGCCCAGTCGTGTCCAACTCCAGCGACCCCATGGACCGCAGCCTACCAGGCTCCTCCGTCCATGGGATTTTCTAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCCCAGACCGTGCTACTGGATCTCAAAGAGATAAATTAACTTGTACCGTGTAGCACAGCTGGGATGTGGCAGGGGCCAGATTCAAACTCAGGTGGACTGAGTCCAAAGTCCGAGATCTTTCAAAAATTGATATAATTCACATCTCCATCTTATATTTACAACCAGTGGTTTTAGTATATTCACAAGATTGTGTAACCATCACTGCTCTCTAATTCTTTTATTTTCATCACTCCCCAAAGAAACCCCATACCTACTAACAGTCACGCCCCACTTCCCCCCTCCCTTTAGTCTCTGGCAACTGCTAATTTACTTCCTGTCTCTATGGATTTGTCTATTTGGGACATTTCACGTAAATTCAATCATACACTATCTGGCCTTTTGTGTCTGTCTTTTTTTCACATGGTAATACCAGAGATATTAACCGCCAAGTTAGAAACCTAGAAATGGGCTTGTTATCTGCTTAGAAAGGACTAACACCTGCCAGCTTGCTTGTGCAGGAAACAGGATAATCGTGGAAACAAAGCAGGCATTCTATTCAATTTAATAAAGATTTATTTTGAAGACCGA TCONS_00171777 TCONS_00171777 r 5' 0 TCONS_00171774 TCONS_00171775 TCONS_00171777 TCONS_00171776 r 3' 748 EMBV3_28403 CTGCAGGGTTTTCTCCTTCATGCAGATTCTCGGGCAACTGTGTCCAATGTCTATCAAATG Gene BVT0102_021075 - 0 NULL GK000001.2:44929467-44947707 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000516 TCONS_00000513 TCONS_00000512 TCONS_00000517 TCONS_00000511 TCONS_00000514 TCONS_00000508 TCONS_00000515 1 XLOC_000137 Coding TCONS_00000515 XLOC_000137 Coding Coding KAT2B 1:44898050-44932665 j TSS263 3249 1 TCONS_00000515_2 329 13 0.906511816028197 2.73572601261755e-72 3.5412169265299e-05 3.79304903083307e-05 1.30350767116483e-84 4.21354609652988e-05 1.65110561153794e-62 3.05100148989944e-05 8.02465940645084e-21 1.90092444131698e-49 0.00204622055920246 0.000938080461120952 0.000187419368743378 8.22943558542485e-80 1.30693739790369e-26 5.48106391178914e-05 0.00286500294574174 0.000656226019619678 0.00425842726124936 3.60852616948577e-12 3.33948571222189e-16 5.86848181440767e-64 0.00165439466553075 0.00264792935280019 0.00384518356539566 6.0897887048917e-05 1.51626340420631e-13 6.43665273154719e-11 1.9372367660567e-07 0.000738501812238177 0.00139716393949289 XM_613744.7 KAT2B PREDICTED: Bos taurus K(lysine) acetyltransferase 2B (KAT2B), mRNA. 0.0 5746 99.84 0.982763927362265 NM_003884.4 KAT2B Homo sapiens K(lysine) acetyltransferase 2B (KAT2B), mRNA. 0.0 3797 86.53 0.982456140350877 TCONS_00000515_2 sp|Q92831|KAT2B_HUMAN KAT2B_HUMAN Histone acetyltransferase KAT2B; 0.0 562 86.75 0.972644376899696 2 coding 0 0 0 0 0.0617178656564051 0.646660230762861 -0.0601446336013718 0.229831919708379 GTAATTGCAGTGTGTTCTCTGTGGGGGAAGAAAAGGTTATCAGTCCACCTCCCGTGGCCGGGACAGTTTCCTACAATTCAAGCTCCGCTTCCCTTGAACAGCAGAACGGAGGGAGCGCCAGTCCGTCCTGTCGAGGCGCGTCCGGGCTTGAGGCAAACCCAGGAGAAAAGAGGAAAATGAACGAGTCTCATGTTTTGGAGGAGACCAAGAAGCCCCGGGTGATGGGCGATATCCCACTGGAGTTAATCCACGAGGTCATGTCCACCATCACAGACCCCACCGCGATGCTTGGGCCAGAGACCAACTTTCTGTCGGCGCACTCGGCCAGGGACGAGGCGGCCAGGCTTGAGGAGCGGAGGGGTGTAATCGAGTTCCACGTGGTGGGCAACTCCCTGAGCCAGAAGCCCAACAAGAAGGTGCTCATGTGGCTGGTAGGGCTGCAGAACGTGTTCTCGCACCAGCTGCCGCGTATGCCCAAGGAGTACATCACCCGGCTCGTCTTCGACCCGAAACACAAAACCCTTGCTTTAATCAAAGATGGCCGTGTCATTGGCGGTATCTGCTTCCGGATGTTCCCGTCCCAGGGCTTCACAGAGATTGTTTTCTGCGCTGTAACCTCTAACGAACAAGTCAAGGGCTATGGAACACACCTGATGAACCACTTGAAGGAATACCACATAAAACACGACATCCTGAACTTCCTCACCTACGCAGATGAATACGCAATTGGATATTTCAAGAAGCAGGGTTTCTCCAAAGAAATTAAAATCCCTAAAACCAAATATGTTGGCTACATCAAGGATTATGAAGGCGCCACTTTAATGGGATGTGAGCTAAATCCACGGATCCCATACACGGAGTTCTCTGTCATCATTAAGAAGCAGAAGGAGATCATTAAAAAGCTGATAGAAAGAAAACAAGCCCAGATTCGGAAAGTCTACCCGGGACTTTCCTGTTTTAAAGATGGAGTTCGGCAGATCCCGATAGAAAGCATTCCTGGAATTCGAGAGACAGGCTGGAAGCCGAGTGGAAGAGAGAGAAGAGGCCAGAGACCCCGACCAGCTGTACAGCACGCTCAGGAGCATCCTGCAGCAGGTGAAGAGCCATCAAAGCGCTTGGCCCTTCATGGAACCCGTGAAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTCCCCATGGATCTGAAAACCATGAGTGAACGCCTCAAGAATAGGTACTACGTGTCTAAGAAACTGTTCATGGCAGATTTACAGCGAGTCTTTACCAATTGCAAAGAGTACAACCCCCCTGAGAGTGAATACTACAAATGTGCCAGTATCCTGGAGAAATTCTTCTTCAGTAAAATTAAGGAAGCTGGATTAATTGACAAGTGATATTTTTTCCTCTGCTTCTTAGAAACTCATCAAACAGTGTGCCTAAAGCATGGTTTAGTTTTACAAAGAATTGGACATAATGTATTGAAGATATTGTAACAATTAGCACTTTTGAAAAACAAAAAACCTCCTCTTAGCTTTACAGATATGTATTTAAATTGAAGTCATAGAGCATTTTTATTTTATGGAATAGATTTTAATCTATTTACTACTATTAATGTCAGTTTTCTATGGCATGTCCATTAGCTGAATATTCAGTACTAGATGATCAGGGGTTTCCTCACAACTTGTATATGAGGGAATTGCACACAGCACCAAGATCTGGGGGAATGCAGAAAATTTTCAGACCGTGAATGTTTCCATTTTTTTCTAATGGAATGTGAGAGTTTATTTTTATTTTATTCTGAAGGACTTTAAAGGAAGGGACACATGATAAAAAGCCCGTAAAAGGTGAAACGTGATGTTTGAAGTCTCATGGTAGACTTTTTATATGTATTTTTAAAAAACACTCATTTAGATGAGGTGCTTTGAGCAGTTCTGAAAAATGCAGTTCCAGAAAAGCAACTGCTTTGATTTCTAAAGAAGAAATTCCAAATAATGCAGACTTTTTTTTATAAGTGTCTGGGTTTTTGATAATTCTGTCTACCTACAACAGACTTGTAAGTGCATAACCACTATTTTAATAATTATTTTCTCTACACGAGTCTGTAATACTGTATTTGACTTTGCTTATGCAGGCCATAAGTTCCAAAAGGCAATTTCTTGGGCCACAAAGGCATCCATTTGAAAACACTTGAGATTGAATTAACATGCTTTAATTTAAAAAGATGTATAATCTATATTATGGATCAAATTTAGTGAATCCTTCACTTTTTTTACAAATAAAGATTTTTCCCCCTTTTCTACAATATACTCTGCCCAACTGATAATGTATTTATGGACACTTGTCCTTTGGCATCTCCAGATTATATTCATTTTGGAGATGAATTCAGTTACCACCAAGACCTTCTGTCAGTATTTTAACGCCTGCTTTGGTACAGGGTAATAATATCCCACTAAAATCCATCATACACCTTACCTGTCTTGGGATTCCGGCTTCGTGCTGGGATTTATTTCCTGATTAACACTACACTGGACAGTGGGAGGTCTGCAACCCCAGCTCTGGGAGAACCAACTCATATAAAGCAAACGGTGGCCATCTTGATGGTCTCGACACTAATTTTTATGATACAAATTTATAAACTGATTTTTGTAAAAGGACTAGGTTTTAAAGGTGTCTCTAACTCAGTGTTTTCTATCAGCATAAACTAATTGAAATGATCATTTGATAGACATTGGACACAGTTGCCAGAGAATCTGCATGAAGGAGAAAACCCTGCAGATGGCTGTGGAGTTGGAAGGATGGTTTTTAATGTGTAAGATACACTCAGAATGCTCACAACTGAGAATGCCTCAACTGTTTAAAGAAACCACCTTGAGTGGCGTCTAGATTTCTAATGAAGAATGATACAGTTTGGATTAAGTATCTTGGACTGGTTTTAAACAAGTGCTTTGTCCTGGATCTGTTGAAGCACCTGGCCAGCTTGGTATCCTGTGAAACGTTTGTTATTTTCTGGGTAGACATTCTTATAGAGTATTGTCTTTAAAATCAGATCGTCTCTTCTATATTGAAAGCATTTTTATGTTTTCTAATTTAAAAATTAATATTTTCTTATAGATATTGTGCAATAAAGCTGAAGTAGGATGTGTGGTTTTTGCAAATGCTTTAACAGCGGATAAAATTTTACATTTGTAAAATTAATATATTGTATTGGTACAAAATAGTTTTAAATTATATTTTAAAAAGCTCTAAAAACAAACAAAAACAAA EMBV3_15504 AACCCAAGGTCTTGAATCCCGAGTTCCCCACCAGTTGTGAGTGGCGTGTAGCCAAGATGA Gene BVT0102_082619 + 0 NULL GK000019.2:19618418-19644321 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092541 TCONS_00092540 TCONS_00092543 TCONS_00092542 1 XLOC_056918 Coding TCONS_00092543 XLOC_056918 Coding Coding KSR1 19:19607261-19621064 j TSS69609 3781 1 TCONS_00092543_1 210 6 0.726488914650051 0.000245759009250321 8.60243255980905e-05 1.80837657308144e-09 1.20794613703691e-05 1.00583568962419e-124 6.30856050653286e-10 1.00704029928164e-08 6.80552118926068e-05 0.000136003576807786 1.03772450306893e-58 1.44858815761045e-06 0 4.08738465589275e-07 7.48144767797322e-75 1.67829508355678e-06 6.2161628081896e-08 0.00030574703306201 0.000128150074050414 3.88795750567033e-05 4.75496413501884e-05 6.46326207811206e-05 0.000169794148512267 0.000310322893183005 0.000277462148690333 4.58553829061768e-05 0.000138720626971991 6.43324300969589e-06 3.63665134340759e-28 1.25493985380503e-10 4.12679070180474e-05 XM_001788749.3 KSR1 PREDICTED: Bos taurus kinase suppressor of ras 1 (KSR1), mRNA. 0.0 967 100.00 0.141496958476593 NM_013571.2 Ksr1 Mus musculus kinase suppressor of ras 1 (Ksr1), mRNA. 0.0 801 85.98 0.181962443797937 TCONS_00092543_1 sp|Q8IVT5|KSR1_HUMAN KSR1_HUMAN Kinase suppressor of Ras 1; 5e-139 416 95.61 0.971428571428571 3 coding 1 0 1 1 -0.965051646978069 0.00923005468196704 0.000335838141063874 0.994721029347164 GGGGGATCGTCTTGCATTCAGGATGGAATTTTGGGAGAGAGGCATGGGGTACCTCCACGCCAAGGGCATTGTGCACAAAGATCTCAAATCCAAGAATGTCTTCTACGACAACGGCAAAGTGGTCATCACAGACTTCGGGCTGTTCGGGATCTCGGGCGTCGTACGAGAAGGACGGCGTGAGAACCAGCTGAAGCTGTCACATGACTGGCTGTGCTACCTGGCCCCCGAGATCGTGCGGGAGATGACCCCCGGGAAGGACGAGGACCAGCTGCCCTTCTCCAAAGCTGCCGACGTCTATGCATTCGGGACTGTTTGGTATGAGCTGCAAGCCAGAGACTGGCCCTTCAAGAACCAAGCTGCAGAGGCCCTGATCTGGCAGATTGGAAGTGGAGAGGGCATGAAGCGAGTCCTGGCCTCCATCAGCCTGGGGAAGGAAGTCACTGAGATCCTGTCTGCCTGCTGGGCCTTCGACCTGCAGGAGCGGCCCAGCTTCCCCCTGCTGATGGACATGCTGGAGAAGCTGCCCAAGCTGAACCGGCGGCTCTCGCACCCTGGGCACTTCTGGAAGTCTGCTGACATTAACAGCAGCAAAGTTGTACCCCGGTTTGAAAGGTTTGGCTTGGGCATCCTGGAGTCCAGTAATCCAAAGATGTAGCCAGCTGTGCGGTTTTTCTGACAACGTATTTCTTTCTTAAATGTGTCTCTCAAACATCCGAACCACCACCACAACAAAAAAAAACCCAATGCTCTTCAAAATACCAGCCACTCTTCTAAGTGCCACAAACCAGGAGCACGAGGCCTTGGCTTAGACCGTTCATCTACAAAAACACTTGGGTCCCGGAGATGGAGCTGCACCTGCCGTTTCTTAAAATGACATCACCAACAACCAGACCTGTCCTGACAGGCGGCAAATGTTTACATATATGTTCGTGTGGAGTTGGACTTGAGGTTGTACAATAGGTAATAATAAAAAAAACAGTCTGTGCAGAGGTTGCTGGCACCGTGGGCCAGGATGGCAGAAGTGGCCCTCCCCTCTGGAGGCGCCCACACTGGGCCAGAGGAAGAAAAACATCATGATTGTGGCTGGTCTCCTGGCAGGATGGGCGGGGTTGGGGGGTGGCAACCACAGGGTTTGACCAGGCTTCTACTTTGGCCCCAAATCCCATCACCTCTCATCCTATCAAAGAGGTGCGGTCTCTTCCTCCTCTTGCAGGTGAGACCCTGACCAAGAGTTGAGCTGGATTAACAGGGTCAGGAGTTTGCAGACAGCTTGAGTTCACCTTTGACCCCTGTAATCCAGTCCATATCTTCTGGAAAAGCAGAGACAGATCAAATCCAGATACCATCTGGACTGATCCAGTGGTTCCCAGCCAGGGTCTCCACTGCCTATGGAGGTGTTTCTTTCAAGAAGCCCCCAGCGGGGCACCTGGGAGATAGGATGAAAGGCTTTAACTGTTTAGATATATCCCAGTCCTTAACTAACATTTGACCCCAGTGCTAAGGCCCAGCCCAGCAGCTGTGTACACCGTGAAAGCTTGATCCATGAAAACAGGGAAGGTAGAAGGTGGGGGAAGAGGCAGGCAGGGTCTCTGAGCCCACTCTCCCAATCACAGGGTGCCCTGTGATTTAGAAGCCCATCATCGATCTTGCCAAAGTTCTGTAACTGCCCACCCCTGAGTCCTGTTGAAACACCCTAGCCTGCTCCTGACTCCTCTGCCCATGTTCAGAGCTCTTAGATAAGGTGGGAGGTGTGCACCCCGCCTTTCATTTAGACCCAGCTAGCAAGCCCCCCACCTTCAGAATCTTCCCAAGCACCAAGGCTTGTGTCTGTTGGAACCAGGTTTGGGAAAGTCCAGCATATGAGAGGGTCCTGCCTGTCCTCATTAGAAGCTGACTCCTAAAGAGGAAAGTTCCAAATGGCAGAGAAGCCCTTCAGTGAAGGTTAGGGCGTATCAGGCTCCAAAGCCAAAAATGACCCAGGGTGATGAAAGTGGAGAGGAGATTGTCTTCAGACCCACAACTCATGTCCACATTTGGAGCCAAGACGAGAAGGCACGTGGCCCTCCCACGGGGTTTATGTACACCTGTCTAACCAGGCTCTGAACCTGGAGTCTGGCCAAGTTGTCACATGAAATGGGCTGCTTGGCCTGGAGACTGTGGGGCAACCTTCCCGGCTCTGGGCTGAGCATCCCTTGGCGGCCCTGCTGGGAGGGCACAGCCGAACAGCTGTGCTGGGTACCCGGGCCTCCCGGCCAACAGCACCTCAACCCTGCCTGCTGGGTGTGTGGGGAGGAAGATGGAGAAGCTGTAAACCAGCTAGACTTGGCTCTGGGGTCTTTTGTCTCTGTGGGATGCTTGGCTTCTCCCCATCATCCATTTGACTGCCAGGTCAGCCTCTCCCCTGATCTCCCCACTCGACATGGCATGTGACTCTGCTTCCTCTGGTCATCAGGCTCCTCCCCCCACAATGGCTCCTTCGCAGAGGTCACAGTTCATGCCTCTCACGTTTCCCCTCTGAACTCTTGGACGAGCAGGTGGCCTGAGGGGTGGGACGGCAGCTGAGTAAATGGGACTCACCTCACTGCCCATGGACAGTCAGTCTGGGTTTTTTTTCCCTTGAAGGGTGTCACACTCTTGGGTCAGTTCAAGAAGATTTCTTTGAGTGCCTACTGTGTGCAAGTAGTACCAGACCAGGAGGGGAGCAGTCACAGTGCCCGCGTTTAGGAAACATGATTTGCCAGGAACCCGGAGGGTGGGACTGGGGCCCACCCTCTTCCTCTCCCGGGCCCTGGGATGCCTTCTTATTCTCAGTCTGAGCCTCTGCCCTACCTGTCATTGAAGAGAAGCAGCTGAGGAGCTCCCCAGGTGGTCCCCATCACCCTGTCTCTATTTAAGTGACTGTGAATTGAGGTTAGGAAGACACGCCTGCCCTTCCGTGTGCTCCCCCCATCTGCTTTGGAAACACATGAAGGATGGCAGATACTGTGAATTCAGCCCTCACAGCCAACTGTGAAAGGGATGGAGAAGCTGGGAGCCCTCCTGGACAAGATCTCGGGGGCTGCAGAGGTCCCCTGGGGTCTGAGAATGGAGCCCAAGTTTCAACCTTCAGCCTGCGCCCTGCCCCCCACCACCCTCCACTCCCCAGCCTCACCTCCAAACCCCTGGGATCTGTTCCTGATGCCTTTAAACACCAGAGCCAGAACCCTTGGTCTCCATCCAACCCAAGGTCTTGAATCCCGAGTTCCCCACCAGTTGTGAGTGGCGTGTAGCCAAGATGACGTCTCCACACCAACCACCAAATCAAAGACGCGTACAGGGCCTGGAATCCCTCTGCCCTCTCACAGCATTTCTTCCTGTGATCACTGAGGGGCATGGCATGCCCTGTAAGCCCCTGGTGGGGGTGGTGGGGGTTGCTGTGTTGCTTTGGGGGCCGGGTGGAGATATAAATGTGAAGCAAGTTAGGGAGCTTGTGCGATGCTGCAGTGTCGGCCAGGATTTCATCTGTGTGTGCAAACCCAGCATCTTCTGTGGCCACGAGGCACACACTTGCTTTTTTGAATGTGATGTAAAATTTGTATATTAAAAGTTTTTATATTTTCTATCAACTGCATTTGTCTTCCAGAAATACTATTAATTTAAATTAAAATGGTTAGTATTAACAGACGTGCACTATCCATTTTTGTGGTTTCTTTTTTTTTTTTTTTTTGCCATTGGCAAGAACACTGTGCCAGGCCCAGCCTGGGTGTCTAGAGTCTGTGAATAAAATTGTTACCAAGGTGTC EMBV3_32458 AGAGGTAGTTTAGAGGGGGGGGGGAAAGAAAAGTCCTGCGTTAAGGAGCCACAGTTCTAT Gene GeneID:615333|TMEM87A:NM_001083515:187_cdna Constitutive 2 NULL GeneID:615333 10 GENE TMEM87A MGC142736 transmembrane protein 87A EMBV3_33710 CCAACGGAGTACAAGGAAACAGCTGGAGAAGGACAGACTGGATCCCCTGAAGTCTCACAA Gene GeneID:540724|WDR70:NM_001076238:63_cdna Constitutive 1 NULL GeneID:540724 20 GENE WDR70 MGC134424 WD repeat domain 70 EMBV3_17497 AGACCAAGTTTTCAGAAACAGGAGCCTTCAGGGTGTCTTCACCAGGGCTAGAAGAAGCAG Gene GeneID:508607|UIMC1:NM_001038061:93_cdna Constitutive 0 NULL GeneID:508607 7 GENE UIMC1 MGC134449 RAP80 ubiquitin interaction motif containing 1 EMBV3_34764 GTGAAACCCAGTGGAAGGAGCTTACCCAGTATTTTGGAGTCAATGAGAGGTTTGACCCCC Gene GeneID:507725|C26H10orf84:NM_001035052:8_cdna Constitutive 0 NULL GeneID:507725 26 GENE C26H10orf84 C10orf84 MGC126974 chromosome 10 open reading frame 84 ortholog EMBV3_03267 CTGCCATTACTACCCTGAAAATGTGAAACCAAAACCCAAACTGAAGGATCCTTGCCCATC Gene GeneID:787624|LOC787624:XM_002696825:615_cdna Constitutive 0 NULL GeneID:787624 21 GENE LOC787624 NULL similar to ADAMTS-like protein 3 precursor (ADAMTSL-3) (Punctin-2) EMBV3_20989 AGGTGGCTTCTGTGGGCCTAAAGTCCTAGGTTGAAAGTTCATTCTCCCTTTTCAGGAAGG Gene BVV0102_245684 + 0 NULL GK000011.2:105394449-105429141 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43567 CATCATGAACCCCCGCTTCTGTGGCTTGTTGGTCCTGGTGTCATTTTCCATCAGCCTTTT Gene GeneID:511642|LOC511642:XM_002688805:220_cdna Constitutive 0 NULL GeneID:511642 7 GENE LOC511642 NULL similar to Olfactory receptor 18 (Olfactory receptor 145-1) (Olfactory receptor TPCR34) EMBV3_21859 GCAATGGTGATCCCTCTCATCCTTCAGACAACCTTTGGAATATGTCATGGTCTGCAGCAC Gene GeneID:504229|TMEM126B:XM_002699039:63_cdna Constitutive 0 NULL GeneID:504229 29 GENE TMEM126B NULL transmembrane protein 126B EMBV3_43443 CCTCATCTACCTGACCAACCACATCAACCCCCACGCGCGCAACGGCCTGTCCATCAAGGA Gene GeneID:541154|IKZF1:NM_001105257:5_cdna Constitutive 1 NULL GeneID:541154 4 GENE IKZF1 MGC152552 IKAROS family zinc finger 1 (Ikaros) EMBV3_12914 CGGGCCGCGGGGGAAAGGTAGAAAAGGAAAATGAAGAAAGACAAAGCGACAGATGCAAAG Gene BVV0102_035401 + 0 NULL GK000009.2:42718790-42836239 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06373 ACTCAGTTTTCCAGCGGTTCAGAGCTCTTTTCTTCAATGTGGGGCAAAGCAGAGTTGAGG Gene BVT0102_076595 + 0 NULL GK000013.2:73872278-73877749 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046218 1 XLOC_026644 Coding TCONS_00046218 XLOC_026644 Coding Coding RIMS4 13:73872678-73899703 = TSS33557 5926 1 TCONS_00046218_2 284 0.0872426594667567 6 0.780935464772054 0.00131258467832174 0.000641851872010573 0.000770829580124461 0.000552224430337366 0.000443000560272832 0.000154225353193028 0.000205938862095594 0.000156202467859793 0.000505948996324363 0.000201107843136155 5.27291647121426e-05 2.35321157487375e-05 0.00035902352560782 0.000252726609080632 4.40987237320944e-05 0.000554884210524408 0.00011766716133981 0.000848922262643404 0.00028658767046731 0.000310058989281663 0.000363201233426771 6.76200086083897e-05 0.000438111710865176 8.76985932969685e-05 0.00105174083629176 0.000282365781717014 0.000846280731308132 0.00012804754447136 4.62850342926938e-05 5.52931706609269e-05 XM_002692328.2 RIMS4 PREDICTED: Bos taurus regulating synaptic membrane exocytosis 4 (RIMS4), partial mRNA. 0.0 9144 100.00 0.855383057711779 NM_001205317.1 RIMS4 Homo sapiens regulating synaptic membrane exocytosis 4 (RIMS4), 0.0 3481 75.40 0.85555180560243 TCONS_00046218_2 sp|Q9H426|RIMS4_HUMAN RIMS4_HUMAN Regulating synaptic membrane exocytosis protein 4; 1e-173 485 100.00 0.830985915492958 1 coding 0 0 0 0 0.00866983126429785 0.945251056739261 0.0301482604593151 0.697992282327443 ATGAAATTCGCTGTCCTCATGGGGTTTACCTTCTGTGTGGAGTCACCACCAGCCTCTGAAAGACTAACCAGAGGCCTGGTCTCTCCGTTCCTTCCCATCCCGTGTCTCTCTCCCCATCTCTCTCGACCACTCTGCCCGGAAGGGGACAGCCGGAGGTTGAAGGGGGCCATCCAGAGGAGCACGGAGACCGGTCTGGCAGTGGAGATGCCCAGCCGGACCCTGCGCCAGGCCAGCCACGAGTCCATTGAGGACAGCATGAACAGCTACGGCTCCGAGGGCAACCTTAACTACGGGGGAGTTTGCCTGGCATCGGATGCCCAGTTCAGTGACTTCCTGGGCAGCATGGGACCAGCACAGTTTGTGGGCCGCCAGACCCTGGCCACCACGCCGATGGGGGACGTGGAGATCGGCTTGCAGGAGCGGAACGGTCAGCTGGAAGTGGACATCATCCAGGCTCGGGGTCTGACGGCCAAGCCAGGCTCCAAGACACTGCCAGCGGCCTACATCAAGGCCTACCTGCTGGAGAACGGCATCTGCATTGCCAAGAAGAAGACCAAAGTCGCTCGCAAGTCGCTGGACCCGCTATATAACCAGGTGCTGCTGTTTCCTGAGAGTCCCCAGGGCAAAGTCCTGCAGGTGATCGTGTGGGGGAACTACGGGCGGATGGAGCGGAAGCAGTTCATGGGCGTGGCCCGCGTGCTGCTGGAGGAGCTGGACTTGACCACCCTGGCCGTGGGCTGGTACAAGCTCTTCCCCACCTCCTCCATGGTGGACCCAGCCACGGGCCCCCTGCTCCGGCAGGCGTCCCAGCTGTCCCTCGAGAGCACCGTGGGGCCCTGTGGCGAGCGATCTTAGTGCGGGGAGGGGGAGGGGCTCCCCGAGATGGTCCGGAGACCCTACCTGGGACCCCAGGCCCCAGGGCATATTGAACAGAGGAGGCCGGGGTTCTCCCCACCCAGTGGGGAAGCTGAATGGGGAGACTTGAACCCCCCAGGGCCCCTCCTCACCCCTTTTTTGCCTCCTATTCCCCGAGACCTTCCCTCTCCCGATGGGATTGGCTGCACTTTTGACTTGGCCGGTTCTTGACCTGGTGGATGTGTCTGCAGTCCGGAGAAAGGAAAGATCGAGGCGGCAGAGCACACCATCCTCCTGCCCCCGACTCTGTCCGACCGCACCCCCTTTTTGCCTCCTTGGAAGCTCGCTGCCCGGAGTCATGTCCAGAACCCAGCGGCCATCTCCATGGTGCCAATTACCAGCAAGTGTCTTTCCTGCGGCACCGGGTTCAGGCAGCTACTCCTGCCCCCCGAGCCTACGGGGCAGCTTTGCAAGGATCCGGCGCCAACTCCGGGGGCCCCGCGCCCCCGACTTGAAGAGGAGCTCAGGCCTCCCTCCGCCTGCCCATGGAAGGAGCTCTGCCGCCGCCTGTTCGAGTCCATCTGTCCGTCCCCTGCCTGTTCCTCTTTTGGTGGCTCTAGAACATGGGGTCCAGCAGGGACCAGGGGAGAGGAAAGGGGTGCCGGGGCCTGGCAGGGGCCCCCAGGGCACCTGGCTTTGTGGGATTGTAAGAAGCTAGTTTGCACACGGTGGGCGGACTGGAAAGAACTCTGTTGGCTGTGTTTCGACCGAGGAGCTGGGGGACCCTAATTTTCGAGAACCCCAGCCCCAGAGAGCTCACCAGTCTCTGAATTTGGGGGATGCCGGTTTAGAGAGGGAGTGTGAAGAAAGCTGGGATTGGGACTCGTGGTGCCAAGGTGAGGGGTTCCCAGGTAGGAGAATCCCTCCTTGTCGGATGAGGTCAAAGGTCATCTTGTCTGGCCCTCTGCCTCCAGGCTAAGGGCCTGGGGAGGCACGCGAGCTCCCCAGTTTTAGTCTTTTTAAACAAACCATCCTGTACTAAGGGCAGAACCAACTGCTCCGGCCTCAGTGACCTTGGCTCAAGGAGAGAAAGAGAATGAGGCGAGACAGGAGTGTGAGAAGGGGGAGATTCCTTCCTGAGCAGGCCTGGGGGCTGCCTTCCCGGCCCCCCCGGCCTGGTCCTCCCTGGAGCCTTTGGAAGCCCTTTTGCATGCGGGGAGGACACAGGCTGGCCCCTTTCTGTAGAAGCACATTTCTGCCACCTCCCCTGGGAGGCACCCAGCCACCCACTACCCACACACACACCCGCCGCCCCCCCGTCATTACCCAGTCCTGCTGTGTAGGACGTAGTCTTGGTTAGCCGAGTAGGCTTAGAGTGCCTGGCCCTGGGCCAGGTCTTAGCTTCACATAGAGTCCTTACAGAGGGGATGGAGAAAATTCCAGGAGGCAGCCTTCTCCCTGCCGGCCTGGCCTGGGTCCAAGCCTGGACCTGGTTCAGGGGAGGCTGGCCCCTCCTCCTGCTCCTCCCTTTCCTCCCCCTCTTCATGTAGGGTTGTAGCCAGAGCCGCCCATGACACTCAGATGTTCTGATTTATTACCCTTGGGACTGATTTTATTTAGGAAGCACTCCTGAGGATGTGGGCCTTGGAGGGGGCTGGGGCTCCATCAGAGGAGGTGGTTTTCCACTGAGGATTGCCCGGCTGTGTTCTGTCCCACCTTATCCCCACTCTCCCCACACCCCACCATTTAGGCTGTGGACCAGGTGAGCCCTTCCACCTGGAACTCTCCCCTCCCCTGGCCTGTTCCCAGCCCTGGGCATCCTTTGAAGTTCTGGTTGAGTTATAGCGCTCCCCTGCATAGGGATGGGGAGATGGAAGCGTCCCCCCCTTGGTCCAGGAGGCCTTCTGACCTTCCTGGAATCATGGCGGCTGGAATCCCAAGGCTGGGGTGGAGGCAGCGGGGCTCAGAACTGGCCCCTCCCCTGTGCTTTTTTTTTTTTTAAACCAGTGTGATTTCTCTGCCGTTTGTTTATTACTCACCATTCGGAATATTTTGAGCCAGGAGAGCACCTTCTCTCTCCAGCTGTCACTGCTCTGGTAGTTCAGGGGTAGCATTTCAAAGCCGGGTTGGGGCCTGGCTGTCCCAACCTGAGGACAGGGTGGGCACAGCCTTGCTCCCCAACCTGAGCCCGCCCTGTTGGGGGTGGGTCTGCACAGCCTTTATAAAGAGAGAAGGCGCTCCAAAGCAATAACATCCTGAGGGTGGTCACCGAGGGCCCCCCTCAATGACTTTCTGTTTGTTCTGTGGTTTTTCAGCTCACCTCCCGGAGGGGTGGGGTGGCACGGGGGCTGGAGCCCTCTTTCTTTGTATCATCGTTGTGAGCACATGGCCGCCTTCCAAGGGGCTCCGACCATTGGGCATGAGACCCCCCATCTGTCCTCACCCAGGGATGGGGGCTTGGGGAGGGAGTGGCTGTTCTCATCATTAGCTTTGGGGAACCTTCCAGCCTGCTCCTATCTGGTCCTTTGCCAGCTCAAACTTCCCCATTTGAAGAGGAGCTGAGACGGTGGCACTGGGGGAATTAGGGGTGTGAGGGGCCTGGGGGTCTCTAAGGGACGATTCTTTTTTCAATCTCTGGGCCAAAGGTCACATGCCAGGGTACGGTGGGAGGGAGTCATCTCCACCTTCCTTCTCCAGAATCTGCCTGTCACACTAAAGGAAAAGGAGCTTTGGGACCATCGGTGAAATGATTTCCATCTTAACAGAGAGATCACAGGCCCCTGGGGTCACCTGTGAGTTCACGACACTGGCAATCTGGGCCTCCTCAACCCCCCGGAGGCTGAGCTGGAGCCAGGGCAGGACCAAGTGGGGCCACCATCTCCCCCCCGCAATATTTCCTCTGCCCTTCTCTCCATGGCCTCCTCCCAGGGGCCTTGAAAAAGATGGGCAGCGCTGATTATAGTCCCATCTGAGAGGGCAGGAAACCAAAGCTCAGAATCAGTAAGTGGCTTGCCCAAGACAAGACCCCTCAGCAATGAGGCCAGAACAGAAGCAGCTCTGTCCTTCTTCCTCCATGGAACAGCAGACCATTGCTCCAGGGCACATTTGCCATAATGAGGATCTGTGACCTTTAGGCCCTGGACCACCCCGCGCTGCTTGCTTGCATCTTGATGGGCCAGTAACTTTTCTGGGCCTTGGGTTTAGGGGGAAGGGTTGCCATAGAGACCTTGCTCTCCTGGGTGGGGGATGGGGGGGGGGGTCTGCCCTGACTGACGTGAGGCTGTGCAGGCTGTGGTCCTGGTCTTGATGCTAAGTGGGGACTCCCCCCAAGGGACCACAGCCCCTCTGAGACCACTCTGAGGGAGGCCAGACAGCACTTCCTGGGGCTGTGTGGGAGTGAGGGGGGCGATGGTACACCTCACATTAAGGCATTCCCCCCCAAACCTTTAGAGAGAATAACATGGGAACTTCTCGGAGTGCTTTTCACACCTGTTTGTTTGCAAAGTGCTTTTATCTCTCGTGTACCCTCACAAGAGCTCCCGGGCAGTCGGTGGAGGCCTGGGTGAGTTATCAGCCCCATTTTACAGAAGAAGCTGAGGCCCGGGGAGGGGAAGGTACTCGCTAAGGTGCCACTGGGAGTTGGTGGCTGAGCTCAGGGGAGAACTCAGTTTTCCAGCGGTTCAGAGCTCTTTTCTTCAATGTGGGGCAAAGCAGAGTTGAGGTCATGTACTTGACAAGCTGATCCACCGTCCAGCTCCTTACATCTGGAGCTCATGGGCACATCTCAGCGTTGAGAGGCACCGCTGAGCCCCGCTGCCCTTGGAGCACAGCTGTTGCGTTAGGCAAGGCCACCTGCATTTATTTATTGAGCAGCAGCCCTGTGCCAGACCCAGGGGACGGGGTGCCCCGACTCCATCGCCCACTGTCCTGTAATGACTCCTTTGGGCTCCAGGAGGCCCCATGTCTTATAGCAGCACCTCAGAGTGGACGGAAAGCTTTCATGTCCATGAGCTCATCTGACTCACAAACCCCACCCGGGAGCCGCTGACATGCCCGTTTGACTCATAGCTTCTGTGAGGGCAAAGTGGAGACTTGAACCCAGGGCCTTGGACATCATCTCTGAGCCCTTTCACCGTACCACTGCCTCCTGAGCGGGTGGCAGGAAGGCAGACCCCTGGTCCTCAGGCCCACTCTCCACTCACCTTTCCCCGTCTTCCCTCTCCAGGAGCAGGAGCCCCTCAGGCTTTGGGGGAGGGAGGGTTTCTGGGGCCCCTGGGTTGGAGCAGGTCACGTTGCATTGTGTTCATGACCATGTAGCTCATGTTGAAAATTAAAGTTTTTGGCTTTTCTAACCCAGCTTGCTCTGTTTTGTGTTGACGCAGTTCTCTCTGGGATGCTGAGGGCTGTTAATTTTAATGACCTGAGTGCTGTGCCATTTCAGCTTTGTTAGTGTCCATTTATACAGGTCTGGGGCCCATCCCAGCACCACTTCCAGAGATGCACAGGAGGGAACAGGGTACTGGGTGAACTCATTTTACAGATGTGGAAACTAAGGCCCAGGGAGGGGATGAGAATTCCCTCAAGTCCCATTGTGGCTGATTGGCAATAACCAGACCTCACAGTTCCCAGAAGAGACTGTGGCCCAGGGACTGCCCTGGCGGTCCAGTGGTTGACTCCACACTTAGAAAGTAAAGATTTGATCCCCACGACTGAAGTGACTTAGCAGCAGTAGCAGCAGCAGGGAACTAAGATCCCACATACTGCACACAGCGGCCAGGGTTGGGGGTGGGGGGAAGACTGGTCCAGGTAGTCCCAGTGACACGGTGGGTGTCAGCAAGACCCCCTCCCCCATCCAAAAATGGGGCTGGCCAAGGACAAAGAACATGACATTTGGGGCTGGGGCCAGTTCCACTCTACATGCCGAGTAAGAGAAATGAGTAGTCTTTAAATGGTGCACATTTTGCCCAGTGGTCCACGCTGGATGGTAAATGTTTTCAGTCCATCTGATCCCCGTGCTTCTCATAGTGGGAGCGGCTGGCCTCACTGGTTAGGATTCCAGTGTGGGAAGTCG EMBV3_37282 CTCAGATTCAGGCCACTTGTGAGGAAACCATGGAGGCTGTGCTTTCAGTCCTAGATGATG Gene GeneID:508767|CPOX:NM_001075372:23_cdna Constitutive 1 NULL GeneID:508767 2 GENE CPOX CPOX MGC151904 coproporphyrinogen oxidase EMBV3_22694 CCACTCACCTGATATATAGCAAAGCCAATCTACTGACACCAGGTTGTGGTGAAAGAAAGC Gene BVV0102_029446 + 0 NULL GK000005.2:38858982-39422845 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03522 TGATGGAGAAATCTGGAGGCTGTATGCTCAAGTGTATGGAAACGGGCAGAGTGACAAGCC Gene GeneID:524908|TTC27:NM_001075862:32_cdna Constitutive 1 NULL GeneID:524908 11 GENE TTC27 MGC137883 tetratricopeptide repeat domain 27 EMBV3_28020 TCAGCTGGTGGGTGTGGCTGGTTACTCACGAAATCTCAAATGACTGAAGGTGGAGTACCC Gene BVT0102_068047 - 0 NULL GK000007.2:19958660-20039903 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212323 1 XLOC_130148 Coding TCONS_00212323 XLOC_130148 Coding Coding LOC100847125 7:19958634-19963149 o TSS159353 1005 1 TCONS_00212323_3 129 3 0.778023925564909 0 0.000589908294609598 0.00191065194186265 1.65256993161292e-05 0 0 0.000110251182698878 0 0.000266929212284332 0.000380743806631566 0 0 0 4.68059477109763e-06 2.84111849102463e-12 0.000919804318726469 0 7.48980862322425e-05 0 0.000479429167978094 1.20824858516822e-05 0 0.000721144390153394 6.67248374241326e-05 0 0.000154229158455083 0 0 1.44913502061355e-05 1.19646609771002e-05 XR_231634.1 LOC101907650 PREDICTED: Bos taurus uncharacterized LOC101907650 (LOC101907650), 0.0 1429 100.00 0.787064676616915 NR_027064.1 TINCR Homo sapiens tissue differentiation-inducing non-protein coding RNA (TINCR), non-coding RNA. 0.0 700 75.64 0.90547263681592 0 coding 0 0 0 0 -0.0186150045903921 0.89507371160544 0.0475673894884369 0.507505749390393 GGTCCGAGCGCCCGGTGCGGGCCATGGAGGGGCTGCGGCGGGGCCTGTCTCGCTGGAAGCGCTACCACATCAAGGTGCACCTGGCGGACGAGGCGCTGCTGCTGCCGCTCACTGTGCGGCCGCGGGACACGCTCAGCGACCTGCGCGCCCAGCTCGTGGGCCAGGGAGTGAGCTCCTGGAAGCGCACCTTCTACTACAACGCGCGGCGGCTGGACGACCACCAGACGGTGCGCGACGTGCGCCTACAGGACGGCTCGGTGCTGCTGCTCGTCAGCGACCCCAGGTAACCTGGGTTGGAGGATGTGGAGCCATGGCCGAGGGGATCAAGGGTGCTGGCTGAAGGAGCAGGCTGGGATGGGGAGGGGAATCTCCTGGGAGCCTTGACCTCACTCAGGGTTCTGGGCTCCCAGGATAGATGCTGAAACACTGGCCTGCCCAGCTGCTGCCCACCACCTGGGACCTTTCTGACGGAGCCCTAGTCCTTGACACCGACTGAGGACATTGCTGCTCCAGGGCAGCCAGCCTTCCAGTTATGCTGTGTGATCCTGAGGCCATGGCTCCCACCTTGGAGCTTCAAGTGCCCAGGGGGATCCACAGTGTCATCTTGGGAGGCAGCCGGAGGATGTCACACATGGAAAAGCGTAGAGCGGAGAGGAGGGGAGCTTGTGGGCATCACCAGCTCCTGCCTTGGACATTCTCTCAGGCATGCCTCTGCCCAAGCTGTGCCCCTTGCTGGAAGCACTTTTCACACCCCTGTCTTCAGCTCCAGTCCACCGGGGATTGCAGCCTCCTCCAGGAAGGATTTCCTTCTTCCCAGACAGTGAGCACCTTGTCTTCTTTGGGGCCCCCACAATCCCCCTCTACTGTGAACAGCCTCAGCTGGTGGGTGTGGCTGGTTACTCACGAAATCTCAAATGACTGAAGGTGGAGTACCCCAGCCCTCTCTCAGCACTCCAGTGTCACACTGTGCCCCTCCCCCAAACCTCTCTGCATGTTGTACCCAGG TCONS_00212322 s 5' 0 TCONS_00212322 s 5' 0 EMBV3_19065 GGCGATGGCGGAGAAGTTCGACCACCTGGAGGGCAGTGCCCCCAGCCTGCCCTCCCCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26993 CACGGTGCACTTGGGATTGAACAATAGGAGCCTGACCTGCTTCCTGAAGTACCCCAGCGA Gene GeneID:613482|LTB4R:NM_001034738:252_cdna Constitutive 0 NULL GeneID:613482 10 GENE LTB4R MGC127092 leukotriene B4 receptor EMBV3_27119 ACACTCTGAACAGCACCAGCATGTCCAAGGCATATCAGAGCACCTTCACAGGAGAGACCA Gene GeneID:506805|MLL2:XM_002687307:245_cdna Constitutive 0 NULL GeneID:506805 5 GENE MLL2 NULL myeloid/lymphoid or mixed-lineage leukemia 2 EMBV3_21965 CCAGGGGAGCTGAAAACCTTCCCCTGGAATTCTGGCTCGCCTCTGCAGGGTTCAGGTTCA Variant GeneID:618250|S100A14:NM_001079634:239_cdna 437^518 1 EMBV3_23843 GeneID:618250 3 GENE S100A14 NULL S100 calcium binding protein A14 EMBV3_33388 GGGGTGGATCATACAAGGCTGATTGATGAGTACTAACAGCTTTGTGAAGTTACTACTTAA Gene BVV0102_425017 - 1 EMBV3_31137 GK000010.2:67749362-67756280 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014438 1 XLOC_008306 Coding TCONS_00014438 XLOC_008306 Coding Coding SOCS4 10:67735113-67753818 = TSS10430 6992 1 TCONS_00014438_4 440 0.0188787185354691 2 0.626283147989735 0.000132120036526736 0.000188884067142425 0.000116765929076244 0.000145553125857685 6.82472295318529e-05 4.64582663010761e-05 0.000121359884153547 0.000248089162138193 0.000594593599503432 0.000313583207802388 0.000103732220150745 0.000233063815838538 6.20747204923996e-05 0.000159826357296861 3.82004272797563e-05 0.00161659535151774 0.00148387890755918 0.0020555182379349 0.000189067941686668 0.0002437211615015 4.85792374207285e-05 0.000538231641375133 0.000537974851514106 0.000908520984449049 0.000203989359087864 0.000165411899146446 0.000373665760298592 0.000132886987470444 0.000169460971373973 6.70656291913243e-05 NM_001076218.2 SOCS4 Bos taurus suppressor of cytokine signaling 4 (SOCS4), mRNA. 0.0 3997 100.00 0.31679061784897 NM_080867.2 SOCS4 Homo sapiens suppressor of cytokine signaling 4 (SOCS4), transcript 0.0 5481 83.16 0.75100114416476 TCONS_00014438_4 sp|Q0VC91|SOCS4_BOVIN SOCS4_BOVIN Suppressor of cytokine signaling 4; 0.0 914 100.00 0.997727272727273 3 noncoding 0 0 0 0 -0.00138093033870268 0.9956141557672 -0.0216448794457679 0.685902849411059 ACCCCCACCCGAGGGGCGCAAATAGGATATAGCGAAGGGTCCGTCCGACATAGGCAGGAAGAGAACACGCTTGTCTTCGATGGGCCGCACGGACGAGGCCAGCGAGGGGAGACTCACCTAGAGGACCGAACCTCCACAGCCGAGGAAAGGGACGGGGGAGTGAGCGCCGGCGCCGGCGCTTCCCGCGCTCGGCGTGGTCCCACACTGCGCCTGCGCTGGCCCGCCCACTCCCAGCGCGGTCCAGACCCGGGACGCCGGGCGGTGGCGTCAGCGGCGCGCACGCCGCTCGGGAAAAAGCCGGTTGCTGGGGGAGTGAGGAAGAAAGGGAGGGAGCCGAACACGGAAGTGGTGGCAGTGCCGGCGGAGCAGGTGGAGGCGGTGAGTGCGATGTCTGCGATGAGAACCCGGCACCTCAGGATGGGGGCTTGCAGACCGACAATCGCCTCGTAGGACTTACATGAGGTGCCAGAGTGGCTGGGCCTCCCTTCTCCACCTCAGCGAATACCCAGAGTGATGGCGGTGGTGATGGCGGCAGTTACAAGGATAGCCCCTGTTAAACTGCGTTCCGAGAGATACATCCAGAAAGTACCCAGAAGAAATATTCTACTGGAAAAATTGAAAAAGCATTATTTATAACACTGGAATTTGTGGACAGTTTGTTAAAATGGCAGAAAATAGTGAAAGTAATAGTAAAAATGTAGATGTAAGGCCCAAAACTAGCCGGAGTCGAAGTGCTGACAGAAAGGATGGTTATGTGTGGAGTGGAAAGAAGTTATCTTGGTCAAAAAAGAGTGAAAGTTGTTCAGATGCTGAAACAGTGAGTGCTATCGAGAAAACTGAAGTTCCTTTAAGGAGCCAAGAAAGGAAGCACAGCTGTTCATCTATCGAGTTGGATTTAGATCATTCCTGTGGGCATAGATTTTTAGGCCGATCTCTTAAACAGAAACTGCAAGATGCTGTGGGGCAGTGTTTTCCAATAAAGAATTGTAGTAGTCGGCATTCTTCAGGGCTTCCATCTAAAAGAAAAATTCATATCAGTGAACTCATGTTAGATAAGTGTCCGTTCCCACCTCGATCAGATTTAGCCTTTAGGTGGCACTTTATTAAACGACACACTGCTCCTATAAGTCCCAAATCAGATGAATGGGTAAGCACAGACTTGTCTCAGAGCGAATTGAGGGATGGTCAGCTAAAACAACGAAGAAACATGGAAGAGGTCAGCTGCTTCTCACATACCAGTGTTCAGCCCTGTGTCATAACCAGTAACAATTCTTCGGGTAGAGGTGGTCCTGGGACTGACTCTATAGTGAACCTGGCTTCAAATAACAGCATAGAAGATAGTGACATGGATTCAGATGATGAAATTATAACACTTTGCACAAGTTCCCGGAAAAGAAACAAACCCAAATGGGAAATTGATGAAGAAATCCTGCAACTGGAAACACCTCCCAAGTACCATACTCAGATTGATTATGTCCACTGTCTTGTACCAGACCTCCTTCAGATCAATAATAATCCATGTTACTGGGGTGTTATGGATAAATATGCAGCTGAAGCTCTACTAGAAGGAAAACCAGAAGGCACCTTTTTACTGCGAGATTCAGCACAGGAAGACTATTTATTCTCTGTTAGTTTTAGACGCTATAGTCGTTCTCTTCACGCTAGAATTGAACAGTGGAATCACAACTTTAGCTTTGATGCACATGATCCTTGTGTCTTCCATTCGCCTGACATTACTGGGCTCCTAGAGCATTACAAGGACCCGAGTGCCTGTATGTTCTTCGAACCACTTTTATCCACTCCTTTAATTCGGACTTTCCCCTTTTCCCTGCAGCATATATGCAGAACAGTTATTTGTAACTGTACAACTTACGATGGCATTGATGCCCTTCCAATTCCTTCTTCCATGAAATTATATCTGAAGGAATATCACTATAAATCAAAAGTTAGAGTACTCAGGATTGATGCACCAGAACAACAATGCTAGAAAAAGGGTAGGAACAAGGGAGTGGTTATATATGTATTTTCATTTAATACTTTATTTTTCTTATTATACCACTTTGAATTTTTCTACAAGGGCAGTTGAAGTCCAAAATAAACTTCTGCCCTAAATTTTACTTGCAGATCAGTTTATTTTTATTAGGATACAGTAATTGTTGAACAATAATAATGGTTACACACTAGGGGTTAATGGATATTTTTGACCAGGTTTGGTTTTTGTTTTTACCATGTAGATTGTATACTTAATTTTTTTCTTTTCTTAATTGTAACTTAAATATGATCCAGGGATATTTGAAGTTTGTAGGCATTGCAAACACATTTAAATAATCTGTATTTCATACTTTTCTTTAAAAATAATTGTTTCTTTTCCTATATATAACATATAAAACGCTTTGTTAACCTATGTCATTGGCATTCCTAACATAAGATATAGTTTCCACATCATCCTTTCATTTGTTTTAAAAGCCTTCGGTAAAGCTGTGTGTGTTGTAATTTACTAATAGGGATGTTAAAAGTTAACAAAATGGCTTCAAATCAAACTTGATGTGTTTTCATTTTAAATATTAATTGTAAAGCTGAATTACTAAATTTGATTAATCAGGTCAGTAAGAATCAAATGAGGACATGATATCTTAGAGGTGAATTTATTCTTCTGTAATGTGGCATGGTCATTTATTATTCCTTGAATAGACCTTTCTCTCAAACTTGGAAGAGTTACCATCTTCAGAACATAAGTATTATTCCCTTCTCACTGGAAGCTTTAAAAATAATGATACTACTATTAGTAACTAGTAATTACTAAATAATAAAGCAACTGGGGTTTTTTCTGTATTGACTTGTGAACTGTTGCTTCTGCTTAGCTCTTTTTTAGAAACTGAGCCTGTTACTTTGGAGAGATGCCACAGTTTATAAACAGCCACAAATTTCCATTGGTAACCAAAGAGACCTAAGTAGTTTTCCATTATTTTGACTTGAGCTTGAATAAGGATTCAAGAAGTAAACATGGAGCTTAGTATTCAGGGAACTTAATACTGGTTTTGATCTTCAGATTTCAGGTAACTATTCCTATTTTCAGAACTAACATATCTTTAGTATGGCTTCAGAAAAAGGAAAACATTTTGAGAGCTATATTGCTTATGCCATACTGAACAATACTGGGCACTGGGTATAATATTTTTAAGTTTAGCATCTCAAGAACAGAGAAGCATTTTTTAGAAAACATTATCCCAATATAATATAAATGAAGTGATAGCCTATTTAACTTTTCTTTTTTAAAGAATCAATAATAAATTTCCTAGACAGTTACTTCTTCTGGTGAGTTGTCTACCCCTTTGTACAAATTAGCATTTTTAATATAGTAAATTGATCTCTTGATGCTAGTTTATCTAGTAGGAAGCTGTTTCTACCTGAATTGAAAGAAATTTGACTCAAATTTCCCAGTTAGATGTTTCTTAAGTATTGCTTTTATGTCGAAGTAGCATTTCCCTTTCCTACAGTTCTGCTGTTAACATAAAGATGGCATTTAAAATTAATTGCTTTAAAATAAGTTTTTAGCAGTTATCACAAAATTGAACAAGAAAATCTCTTACCATTATCTTCTAGCATCTTTTTTTCTCAAGTGATCTCAAGATTGTCTTGGTTCCAGTGAGGGTTAGCTACTAAAATAGCACCTCTCTCAGCAGTGATGAGGCTCAGGATAACAACATCAGTGTCAGGATAAATATCTCTTCTAAAGATGATATTTCCCTTTTACAAAAGTTGGACAGTCTCATACTACCTCATCTTTCTTGTGGCGCTTTTGTAGATCACTGAGAAGCTTATCTTATTTACCAATATAATGCTTCCTAAACATCCATCTTTGGTGAAGAAAATTAACAGTATGGTTAGACTCTACCCATAATTATAGTTTTTTATCAGAATTTGATATTGAGACTTTCTGTTTCTATGAAACAATATTGTTTTAAATATTTTTCTTTTAAAGATAACTTTTTATCAATACAGAAAAACCTAAGGAATGATTAGCTAATGAATATTCTGTTAAAGGTAATTTTATAAAGAAAAAGAAAATATGCTGTCTTTTATAATGGTAAAAATTAGTATTTATATGAAAATCAAGATCTAAGTAGCCTTTCATATATTCAAACTGGTTGCTTGTGATATATTTTCTCTGCTTTCTTATTTTTTCAACTTCAAGGTATTGATAGCTGTTAACATTTTCAAAATACTGCCATTTATATAGCCTTGAAGCAGATGATCTAATAAATGAGAGCAGGAAAGAGACTCATTTACTCTGAAACAGTTTGTATTTTTTCCTTTGGTATTTGCTACAGTGAAAAGAAATCGGGAAAGTAGAAATGTAAGATTTGAGAAGGGAATTGATTACCATGAAGGGAAAAGAAGAGTAAGAATTCTTTAGAGCATGAAGCGATTGGAATTTAGAAAGGTTAAGTCTTTCTCAGTGACTTTTTGAGGACACATTTGAAAGAGCATTCAGCATTCAGAAATTAACTCATTAAAAATATACTTACTGGAATTATGTGTAAGTAAATGAGTATAAATTTTGAGAGGAACAATGTGGGGAGATATATAAATATAAATTTTATAGCTAAGTTGAACACTGAGCATTTGAAAAGTGTAAATTTCAGAGTTGAGAAAGCATTCAGCATGGTGGAAATGTAGTGCTTACTGGTGAGAGCGGATGGGGCTAAAAGAAACGATAAAATATTAAAATTAAGAATTTAGGCATCACCTCAGGGGAAAGCCTTGACAGTGAAAGGGAACTACTTAATCGCTAATAGCTAGTCTGGACCAGACACTTAAATGCGCTTTGGGAATCATCCTGCACTAACCAGGAAACAAACTTGATTTTTCTATTTCTCTCTGAAGCTTTCAAGAGTACCCCCAAGCCCGCCTCCCCTTTTTTTAAGCTACAGCATCTTGATTCATACTGTACTTCCCGAAACATGCTGAATGGATTTTTTTAGGTTACCTGAGCATTTTTGTATGAAGAATTATATCTGATCTTTCTATAACTGTGCCATTCACTTAAATAATTCATGGAATGGTTTAATTTAAAGGAAGACCTAATAGGAAGAAGATTAAAGGAAGCTTTTAGTCAGCCTGTGGCTAGATTTATTGATTTGGTGATCAGACTTGTGTTCTTTCCTGAATTTTAGCTAATGGCAAACTGTGGTCAAAAAATGGCTTTCAGTTAAAGTTTTGACTTCTTATTGTAAATAATATAAAGAATGTCTAAGTAATTAGAAATCCTTTTTAAAAAGTAGAGCAAATGTGGCAAATAGGATTCATTATACAAATTCCATTTCTTTTTATAAAAAACAAACCATTATCATTTATTCATGAGCCAAAGCCATTAAGAAGATAAATCAAGTTATCAGCTTCCTGTCTCTCTGAAATTTGGATCATTTTATAGATCCATGTAATAGAGAGCTTCCTTCCTATGAAACAAAAATCTTGAGACCTAACTCTTAGACTCTTAGTTTTCATTAAAAATCTTTTTTGTCACTTTTAGCTATAATCAGAGTCAAATAGATTATACATTCATTTTGGTAGAGGAAATTTCACAGGAAGTGGACTTAATTATACAACATTCCCTGAGGCAACACAAGGGAAACAATGTTTAAAGTAGATTGTGCTTAGGTAATTTAATGCCCAAATGAATAAAAGATTTTAAGTCAAGCAGATTATTTCTACTTTGGGGAAAAAAAATGTTTACAATCTTCATTTTACATAGACAGTTTTACATTCATTTTTACTTCTGAAGAATGGACAGAAAGCACAAGGGGTTTTTCTCTTTTAATGGTCTAGAAATAAGCAACACTACAAAAGTGTACTATTAACACATGAAGATAGTGGAGACAAAACGGAAGTAACTATGGCTTCTAAATAAAAATGTAGACTAATGGATATAATCCAATGAAAAGGAATTTAAGGCACATGACTCCTATTTCAAATAAAGACAGTCTTTTTTACTTTTTAATTTTGAATACATTACTCAATTCTCTCTTTAATTTCCTAGCACATAAAATATAGATGATAATAGATGTCACTTGACTTCCTGCAGGTTAATTCTTTATGGTCCAAGAGGTGACCCTTGGAGCATACTTGAAAATATTTCTGTATAGCTGTCAAGTACTAACGTGATGACAGGTTTTCAGAGTTTCCCCTTAGAGAACCCTGCAGATTCACATTCATTTCTTTTAGTCTGTAAAGGCCTTCTTGACTTGATTTGACAATAAAGATAATGGTACAATTTGAATTTATGGTTTAGACTCTGCAATTAGATGAACAGTTGCAATTTCCTCCTACTCTTAATAAGGTTTATGTAAAATTGATGTTTGCCTAAGTTATTTTAAAAGTTGATTACATTTGCAGGAAGAAAAGATAATCACTTTTGCCATAGTTATAATCAAATTTAAGCTTTCAGACGAGTATAAAACTCAAGGAGGTTTACTTAAATTATGCTGACTTTGCTAGAATTGGATAAATTCTGTATAAACCAAGTATGAACTAGATATATACTTGAATATACAGAGTTTAAGTAGTAACTTCACAAAGCTGTTAGTACTCATCAATCAGCCTTGTATGATCCACCCCTTACCTAAAAAGTAGAGTGTTTCCCTTTTTATTTCTAATCCTGAAGTTGAATGTTTCTTCTTGGATGTGAGTTCAAATAAATTGATCTGAATACATTTTCATTTCTTATTAAAACCTCATATATAAAATCCAAAGGCTTTGTAGTCTGTTTTCAAAACACTACTGCATATCCTTACCTGACACGTTCAACTTGGAGAAATTTTTAAATCTGTATTACACATTTTCCTTTCAGTTCTTTAGTGTGTCATTTTAGGTCTTCCAGAAACATGTCAAAATGTGATTAAATGTACAAGAGATGTATTGAAGGGCAATGGACACCTTTGAAGAATAAAGGGGAATGGGACTTCACTGGTGGTCCAGTGGTTATAACTCTG EMBV3_23687 CGGGACTTTGCTGGCCCCTACTTTGTGTCGGAAGACAACATGGCCTTTGGGAAGCCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23063 GGCATCCCAATGGACGTGGAAATGGCCTATGTCCAGGACAACTTCCTGACTAATGACATC Gene GeneID:512718|MPND:XM_002688932:124_cdna Constitutive 0 NULL GeneID:512718 7 GENE MPND NULL MPN domain containing EMBV3_32297 AGCTGGACGGAGACAAGAAGATGTCCCGGATCATAAAGCGCGTAGGGCTGCCCATGTACA Gene GeneID:531720|KLRG2:XM_002687065:205_cdna Constitutive 0 NULL GeneID:531720 4 GENE KLRG2 NULL killer cell lectin-like receptor subfamily G, member 2 EMBV3_07615 GCGGGCCTCACTACTGCCACCAGGTGAAACACAAGGACAAGCAAATCCACCCCTCAGAGA Gene GeneID:100295709|LOC100295709:XM_002690420:114_cdna Constitutive 0 NULL GeneID:100295709 10 GENE LOC100295709 NULL similar to centromere protein A EMBV3_22789 CGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCC Gene GeneID:282034|RBBP6:XM_002697999:94_cdna Constitutive 0 NULL GeneID:282034 25 GENE RBBP6 NULL retinoblastoma binding protein 6 EMBV3_26346 TAAAGGGAGCTGTCGATGGAGGCTTGTCTATCCCTCACAGTACCAAACGGTTCCCTGGTT Gene GeneID:100299845|LOC100299845:XR_083789:94_cdna Constitutive 0 NULL GeneID:100299845 11 PSEUDO LOC100299845 NULL similar to ribosomal protein L5 EMBV3_11740 GATCTTCTGTGCCAGGAAGGATTGCCTCCATGACTGGGGAATTCACATGAAGTACAAGAC Gene GeneID:504760|DDX58:XM_002689480:17_cdna Constitutive 0 NULL GeneID:504760 8 GENE DDX58 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 EMBV3_03486 TCTATGCTGACCCCTACACACCACCTGCCACTTCCCACCGCAAGATCACAGATGTCCAGA Gene GeneID:520081|PLEKHN1:XM_002694194:690_cdna Constitutive 0 NULL GeneID:520081 16 GENE PLEKHN1 NULL pleckstrin homology domain containing, family N member 1 EMBV3_29664 TTTCTTAAAAAAATACCAGCAGTTACTCATGCAATATATTCTGCATTTATAAAACTAGTT Gene GeneID:281814|HIF1A:NM_174339:20_cdna Constitutive 2 NULL GeneID:281814 10 GENE HIF1A NULL hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) EMBV3_36730 CCTACAAAACGACCCTGAACCTTCCATCACAGTTAAGTTCTCCCCAGACATATACAGGTG Gene GeneID:613475|MSRB2:XM_002692090:282_cdna Constitutive 0 NULL GeneID:613475 13 GENE MSRB2 NULL methionine sulfoxide reductase B2 EMBV3_11712 AAAGTCAGGGCAGTCACGGTGGAGCTGCGTTAGCCCCAGAGAGCGGAGAGGGCATCACCT Gene BVV0102_180576 - 1 EMBV3_24534 GK000019.2:14946572-14950017 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40041 CAAGCCGGCCTCAGAGCACTATGACGACGAGGAAGGCAACGAACAGGATCAGGACCAGTG Variant GeneID:505356|C15H11ORF51:NM_001034243:137_cdna 236^367 3 EMBV3_40106 GeneID:505356 15 GENE C15H11ORF51 MGC128633 protein HSPC020 homolog EMBV3_12825 GTGGCACAGAAGTCGATAGCCTGCAACCCATGAAATCGGGCATTCAGATGGCAGAAGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21572 GGAAAAGAGTCACAAAAGTGAGGGAAACAGAAAGCCCAGAGGTGCCCCTGTAGTTTGGTG Gene BVT0102_307084 + 1 EMBV3_41934 GK000012.2:91104280-91149272 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118445 1 XLOC_072611 NonCoding TCONS_00118445 XLOC_072611 NonCoding NonCoding - 20:72020216-72021671 - TSS88913 1455 1 TCONS_00118445_1 93 1 0 0 0 0 0 0 1.22922640129507e-05 0 0 0 3.25200270265701e-05 7.86662277434981e-07 0 0 0 0 0.000314639847975331 0.000125515593897857 0 0 0 0 1.02002268653543e-05 0.000135561637961718 1.72831205193051e-05 0.000104760541639659 1.45267449671616e-05 1.20807209703397e-05 3.30074411259793e-05 3.67015049693767e-05 0.000181813188686205 XR_232853.1 LOC101909421 PREDICTED: Bos taurus uncharacterized LOC101909421 (LOC101909421), 0.0 839 75.83 0.706529209621993 0 noncoding 0 0 0 0 -0.034142387074609 0.757033454679214 0.0101554384224792 0.848614882017471 ACACCTGGCCCGCGTCGGGGGCGGAGCGCGCACCGGGGGCGGAGCGCACCTCCTCCTAGCTCCTAGGCTGTGGGTCCTAGGTCTCAGGGGTCGCCATTGCGGCTGGGAATGCCCATTTCGTGGGCTCCTGGGTCCCCATCGATCGGCATCCAGTGAGCGGAGCGGAGAGGTGCGGACCACAGGTAAAGGAACTGGGGCTCCGTGGCACAGGGTGGAGCAGGGATCCATGTATTCCGCCCTCTCTGTTGGCACAGTCTCGGAGCCCCCTAACCTGGCGGTCGCAGAAAGGCCTCGCCATTGGGGTCAAGGCCTTTACCACTTTACCCCTTCGCATAAAGCTCAGACCCGCGCGGTTTTCCAAAGCAGCCCAGTGCCTGCAGCGAGGTCCCCAGGAAGTCTAAGGGATTTATCCTGCCTGGTGATTTCACCTGCTGGTAGTCCACAACCCTTACTCTGGCCGACTGGCCCAGCCCTGCTACCGGCAGCTTGCAGCCCAGCGGGCCCTTGACCACCTGCTGGGATGGGGAAGGGGAAGGGTCCACGAATTGCACCCTAGAAACTTAGTAGGGTGCATGGATTTAAACACGTGGTGGTCGCCCAGGCAGAAAAGAAGGGAGGAGGGCACCTTGCTGCTCTTTCATGGTGGAATCTGTGGCTGTCCTGCTGAGAGGGGGGCCTTTCCATGAGGACCCTGTGCAATAAGTGTGGTGTTTTAGAACTGAATAAATAGAACGTGTTAATTTTTTTTTTTTAAATTATGTGGTGCTTTAATTTTAAAAAAAAAGCTCCAAGTTTTTTTGCAAATTGAGGTCTAAAAATTGAAGGCCTATTTTCCTTCCACTGTGGCATTCAGTGGAGAAATGTGCGGTTTTTTTTTTTTTTTTTTAAGAAAAGAGTCAGAAAAGTGAGGGAAACAGAAAGCCCAGAGGTGCCCCTGTAGTTTGGTGAAGGCTTTAGGAGGTCACTTGTAAATGCTGCTGGCTGTAGGGAGGCAGTCTCTTCCTGTGGCTGATGGGCACAGAGCTCTGCAGGCTTGTCCTTTGCATGGATGTTCTTGTTTGTGGAAATCCAGCTCGGAGCCATCTCCTGATGTGTAAGAACTTTCCAGACTAGACCCCTAGGCAAATCCCTTAGGGCCAGGGACTCCTTCCTTCATTGTATTTGTCTGTTTGACTGAAAAGCAGCAATGACATATTTTTCTTTAAATCTGGTCTATCATCCAGGCCTTGGAGTAATATTTCCCATCCCTCTCAATAGGCTTGGGTTCCAGGAATGAACTATGGTCAGTTGTCCATGATTCTACAGATGAGGACACTGAGGGTGGAGGACTGTCTAAGGGAGAATGGAGATCCTTCCAGGAACCCTGGCTCCTGGGTTTTTAATGAGCTTCCTACCCAGCACGGTCATTGATTGGCAAGTGTTGACATTGAGAATAAACTATTGGTGGAAATGTGA TCONS_00115351 . 5' 30852 TCONS_00115351 . 5' 30852 EMBV3_24837 CAATCAGCCCACCCCTAATTGGATCACAGATCTAATTCAATCAAACTTCCCTTCTCTTCC Gene BVT0102_338394 + 1 EMBV3_00300 GK000015.2:15676444-15705459 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060585 TCONS_00060586 1 XLOC_036781 NonCoding TCONS_00060586 XLOC_036781 NonCoding NonCoding - 15:15701189-15704730 - TSS45279 1339 1 TCONS_00060586_2 82 0.253174010455564 3 0.622598870056497 1.01595385091076e-05 3.75210595451149e-05 1.38212822155525e-05 0 0 0 0 0 0.000186005049924427 9.52569079227671e-05 0.000199206446488184 6.99529899665077e-05 0.000148669311350007 3.71928329347728e-09 1.35449583286916e-08 0.000591745023982114 0.00192060746885226 0.000281077734183555 4.81981640623154e-05 0 0 7.20444918077304e-05 0.000178136150066847 0.000632270565902325 3.62197859696628e-05 0 0 5.76041851990612e-05 0.000317839160437636 2.69403762794986e-05 XM_005194562.1 KDM4D PREDICTED: Bos taurus lysine (K)-specific demethylase 4D (KDM4D), 1e-160 571 100.00 0.235250186706497 NM_018039.2 KDM4D Homo sapiens lysine (K)-specific demethylase 4D (KDM4D), mRNA. 2e-124 450 91.67 0.234503360716953 0 noncoding 1 1 0 0 -0.014415971369803 0.914804690082586 -0.014415971369803 0.914804690082586 GTGAACGGAGAGCCCCGGGTAGCGGACACCAAGTCCCCGGCTAGCGAGAGAGCATAGAAAAGGATTACACCAAACTGTTTAAATCCAACGGCTCCTGCTTCCTTTCTCCTGAGCTAGACCCAACAAACCTAGAGAGTTGGGCTACGGAAAGTAGTATTTGCATTTAATTGGATATGAAGAAAGAACAAATATGTACGGGGGCAACCACGATCTTTATAAAGAACATAAGTTCCAGGAAAGCAGAAACCTTGTCTCTCTTGTTCACTGGTGTATCCTCTGCATATAGAACAGTGCTTGGCATATAATAGGTTCTGAGAATGGATAATCATCTGACTTCCCTGAGAAAATAGAAGCTCTTTTTCTCAGAGGACTCCTCATCTCTCCCCAGCAGATGTACTGAGCTGCTTTTGACTGTGTCCTTACATTGAGCTTTCCGTGTATTGGAAGAGGTGAACACGCTGTTGAAAGTGAAAGTGAAGTTGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAATAGTCCTGGAGTGGATTGCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGGTCTCCCACACTGTAGACAGATGCTTTTACTGTCTGAGCCACCAGGGAATTCACTGTTCGGGAACCCTAATCCTCTCCCTTGTGCTCTGGGTCCAGATCCCTGCAGCCTTCCCTAAAACAGTGCCTGGCACCAATAGGTGCACATAAATGTTTTCCAAATGAATGAATGAGTGAATCCATGAGAGAGTGAGTGAACGAGTTTTAACAGGAAAAAAAAATCACATTTGCTGCAAAAAGTTATTATCTTAATCTTTATATGTCCTTATACTTTAAAGGAGAAAAAAGTAATTTTTATTCTGCTAGTCTGAAATCCAGATTTAAAGTGAAGATACACCAAGACCCAGAAAGACGTTGTTTTTAGGAAAGAATCTCTAAATGAAAAATCAAGTGATTAACAGGCTCTATAAGTACTATCAGAATTTTAATTCAATCAGCCCACCCCTAATTGGATCACAGATCTAATTCAATCAAACTTCCCTTCTCTTCCTCAATTCTAGTAAACCCTCTCATTTACAAAGTTACCAGCCCACAAACTGTGAAACTTTTGCTTGAAAATGAAGGAAAAAACCTAGTGGTCAGAAGTTAGAAATCACATTTCAAAAATAAAAATATCAATGTAATAATATCAAAAATGTAAAAAATCACATTTAAAAAATAAAGTAATATAAAAAATCTGAAAATGACTGATTTTTATAAAAAGTTATTGCTCTAACCTGTTTTGAAAAG TCONS_00058358 r 5' 2642 TCONS_00058358 r 5' 125 EMBV3_39319 GAGAATCGGGCGCTGCTAGGAGTTTTAACTGTTTTTGTTAATAGTGGTGTGGAGTGAGCT Variant GeneID:525263|GEMIN6:NM_001046278:125_cdna 57^277 1 EMBV3_42755 GeneID:525263 11 GENE GEMIN6 MGC137687 gem (nuclear organelle) associated protein 6 EMBV3_33781 ACTTGGCCTAGCCTGATGGTCAGCACCATGGACGGAGAACTAACTGCTCACAGCCAGACT Gene GeneID:616090|MBD3:NM_001128505:101_cdna Constitutive 1 NULL GeneID:616090 7 GENE MBD3 NULL methyl-CpG binding domain protein 3 EMBV3_19000 TTCGGCAAAGAGTGGTTTTCCTACGTATGGCCCATTGAAAAGGTATCAGAATGGTGTGTG Gene GeneID:781252|LIG4:XM_002691989:81_cdna UTR3_Alt 1 NULL GeneID:781252 12 GENE LIG4 NULL ligase IV, DNA, ATP-dependent EMBV3_16758 GAAGCTATGGCCTCCCTGCTCAAGAAGGAGCTGGAGCAGATGGAAGACTACTTCCTCGAT Gene GeneID:515654|ATF5:XM_002695124:625_cdna Constitutive 0 NULL GeneID:515654 18 GENE ATF5 NULL activating transcription factor 5 EMBV3_04954 TGAATCTGCCCAGAGCAAGATGCTGAGTGGTGTTGGAGGCTTCGTGCTGGGGCTGATCTT Gene GeneID:539241|BLA-DQB:NM_001034668:2_cdna Constitutive 0 NULL GeneID:539241 23 GENE BLA-DQB BoLA-DQB DQB DQB1 MGC128114 OLA-DQB MHC class II antigen EMBV3_03544 TAGATACGATATAGAACATTTTAAAAACTCCCTTGCACTTTCTTTTACTTAGCACTGCCT Gene GeneID:511775|NSUN6:NM_001083670:94_cdna Constitutive 2 NULL GeneID:511775 13 GENE NSUN6 MGC137499 NOP2/Sun domain family, member 6 EMBV3_16602 ATTCTCACTAGTACCTCTGATTGAAGGTGTGGGAAGAGAGTGACTACCTGGGTCACAGCG Gene GeneID:538608|NRIP3:NM_001102218:184_cdna UTR3_Alt 2 NULL GeneID:538608 15 GENE NRIP3 MGC148622 nuclear receptor interacting protein 3 EMBV3_18696 CCTGAAATCCCGGCTCAGCATCACCAAGGACAACTCCAAGAGCCAAGTCTCTCTGTCAGT Gene GeneID:524810|LOC524810:XM_002696803:549_cdna Constitutive 0 NULL GeneID:524810 21 GENE LOC524810 NULL IgM EMBV3_15847 AAAGTGTCATGCTTCCAGTCTACTGTAAAGGGATCACTGCTTTGATTGAAATACCTAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05402 GCAAGTGCCTGAAGACGTACACGGGCCACAAGAACGAGAAGTACTGCATATTCGCCAACT Gene GeneID:100125836|WDR5:NM_001105475:455_cdna Constitutive 0 NULL GeneID:100125836 11 GENE WDR5 MGC137327 WD repeat domain 5 EMBV3_25522 CCGCCGGGGATTCCAGATGCTGTTGATGGAGTGACTTTAACCCCAAGTCCAGCAAGCAGG Variant GeneID:281078|CLTA:NM_174022:8_cdna 319^739 7 EMBV3_43649 GeneID:281078 8 GENE CLTA CLTA2 MGC140767 clathrin, light chain (Lca) EMBV3_38093 GCTGCTGTCTTGGGTTTAAGTTATTTCATTAGCTCCACTTGTCTCGTGGCCTTCCTGATG Gene GeneID:539853|TACSTD2:XM_002686363:135_cdna Constitutive 0 NULL GeneID:539853 3 GENE TACSTD2 NULL tumor-associated calcium signal transducer 2 EMBV3_35404 GGCTTGACTATAGCTCCGTAATTGTCACTCTCAGCCTGGGTAATATGTTCAGAAAGCTCT Gene BVT0102_051595 + 0 NULL GK000001.2:107215042-107240576 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009926 1 XLOC_005478 NonCoding TCONS_00009926 XLOC_005478 NonCoding NonCoding - 1:107235865-107238307 - TSS7003 2442 1 TCONS_00009926_7 97 0.28009828009828 1 0 0.000691666240514562 0.000624769336244855 0.000360004418998683 0.000361591700626082 0.000708632093460996 5.81039555853082e-05 0.000138509277637075 0.000194169965878775 0.000357027034108159 0 4.12464537066939e-05 0 1.1749729380275e-06 3.69205347147705e-05 1.20545292433428e-05 0.00105992171410979 0.000278744444814964 0.00109939833983336 0.000333292372481046 0.00172718165243129 1.36744781445477e-05 0.000756652308909957 0.000507164648971839 0.000381015464188931 0.000130511931630347 0.000262786904761615 8.8774937091767e-05 3.93332455737572e-05 1.98796400668597e-05 0.000502046167514578 NM_001102510.1 LRRC30 Bos taurus leucine rich repeat containing 30 (LRRC30), mRNA. 1e-79 302 91.90 0.0855855855855856 0 noncoding 0 0 0 0 -0.133690009701579 0.471911575686561 0.0161704788967687 0.759452111321386 CTCTCTTCAAAGTCCTTAACTTGGATTTATTGAAGTGATTGTACAAATGAAGGTGTGGTTATTACTAAACACATGAACATGATCATAATCAACCCTTGGTTAAACAGTTTGCGGCTTAACAGTGGTAAAAATAAAAAATACTGGACAAAGCATCAACATTATTAAGAATTAGCAAATAAACTTACATACTAGAAAACAAGTTTTAGAATCAGGTATATAATGGAAACCTCCCAATCACTTGCTCTGTGCAATCTGCCACCTAGTCTAAGTGGTCTTACTTTCAGCTTTATGCTATTTTGGATAACAACGAGAGAGTGTATTCCTAAATACTGGCTGTAATTTTAAGATAATGACTTTACTGTAAATTCACTTTGTACCATGTTTTCAACTAGATTTATTTCCTCTGTGGTGTGGATTCTCTCTCAGAGCTTTCTGAACATATTACCCAGGCTGAGAGTGACAATTACGGAGCTATAGTCAAGCCTTACATTTTAGGCAAGAAATAACTTGCCAAACTTAATTATATATATACAACGTGAAAGATGGGACAACATGGGATAAGGATTTTAGAATGAATAAGAAAAGAGAGTAAGTAAATGTAAATCGTTTACATTTCCATTATTATACAATGGATACATAATTTTTAAAAGTCTAGTTAGAATTTAAAAAATGAATTAATACCAAATCTGCTATCCTCCCTTTTCTATTATTTTAAATAGATTTTCTTACTCTCACATAGTGATAAAATATAAGTATTTATTTTGATTCTATCTGAAAAGCAAAGATAACTTCACAAAAGCAACTAAAAGGTCTTGGAACAAATGTTAAAAATCCTTAGCTGTAGCAAGGTTTTTGCTTATTATTCATACAAAAAGAAGGGAGCCCATGTTTAGAGTTTCAAGCAAGATCACCGAGCTTCTACTATTGATGTGAGGCTGCTGAAGGTCAAAGTAAATCATACTATTTCTTAATCCTGCTTTCATTAACAAATCAGCCTCTTCCATGAAAGGATGAGTGCTTCTAAATGGCAAACTATGCTGCAACCACTAAGAGTCACTGAATGAGAAAACAGTACTATTTCCATATAGCAGAATTTCCCAAAGTGCTTCCTATGGAACACAGGCTTCTTGGAGTGTTACTAGGTATTACTCAAAAAAGTTTCCATGGTCAGATGAATCTGGAAAACACTAGAACTACATATGTGGTATTTTTTTTTTTAGCTTTCTTCAGAGGATATTTAAATTAGAACCTTCAATGTACTAACTCTCTAAGATAGTATGTTTCCCAAAACCCTTTTGGCCCTGGAGCCCTATATGAGGAAGAGGATCTTTGCAGCTTGTGTCCTGTGGGACATGCTGGGGGAACACTCCTGCAGTGCTCAACTAATCAGCTTCAAAGTCGAGATGTGAATGAGTTAATCCGGGGGCAATTAAAACGGCCCTAGTCTCATGGGCTTCCCTGGTGGCTCAGACGGTAAAGCGTCTGTCTGCAATGCGGGAGACCCGGGTTCCATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGACAACCTACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTAGGCTACAGTCCATGGGGTTGCAAAGAGTTGGACACGATTGAGCAAATTTATTTTACTTTACTTTATGGTATCTAATGGTCATATCATTTCTGCAGAGCTAGGTCAGGAATGCTGGTGTGATGAGCTAATGAACATCAAAATCAGTCTCATACTGGGTCAAAAGAAGGAAACAATTTTCTGAGATCACTGGAAAATAAAACCTTATCCAGAGTATGGATTACTGTACTTCCAAATGTACAATAAACTGTTGCCCTTTCTAAACTTTCTGTGTTTCCAGTTGCAAGAGAGTTAGATCTAGCATCAATTCGGCTGGGGGGAGGAGGAGTGGGGGGGAAGTCAGGAAAATCAAAGTATACTTGGCAAAGGAAGAAGTGATCACTCCCTTTGTGAATCCCTCATGTATGGATGAACATTCCAGTGATCCAATTCAATTGTGTAATCAACTTCCTAGAACCACTTCAGATAGGGTTGGCGATGCCATCACTCACGTAATCCTGTCTGCACAAAATGTTCATGGGTTGAAATCACATCAGTTGTATGTAATAAGGCCCATTTTAAATATCCAAATTGCATGGGCTCCCTGGTGCTCAGATGGTAACGAATCCGCCTGCAATGCAGGGAACCCAAGTTTGATTTCTGGGTCAGGAAGATCTCTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGAAGAATCCCATGGATAGAGGAGCCTGGTAGGCTCCAGTCCATGGGGTCACAAAGAGTGGGACCCAACTGAGTGACTCACACTTTCACTTTCATATGCTCCTTCACTCTGTAAAACACTCTGTAATACTCTTACCACATAGACANN TCONS_00004770 TCONS_00004771 TCONS_00004772 TCONS_00004773 TCONS_00004774 . 3' 195 TCONS_00004770 TCONS_00004771 TCONS_00004772 TCONS_00004773 TCONS_00004774 . 3' 2636 EMBV3_09897 AGACCTGGAAGTAGACCGTCTTCAAAGAGAAGTTCAGTGTATTTTCCCAAACGCAAGCCG Gene GeneID:510497|ABCA5:XM_002696223:11_cdna Constitutive 0 NULL GeneID:510497 19 GENE ABCA5 NULL ATP-binding cassette, sub-family A (ABC1), member 5 EMBV3_04414 AACGGAGAAGGAGAGACAGAGCTAAACAAGGGCCGTTGTTCAAGAGAGAACTGCAAGTAT Variant GeneID:527679|MBNL2:NM_001099710:52_cdna 200^977 3 EMBV3_10906 GeneID:527679 12 GENE MBNL2 NULL muscleblind-like 2 (Drosophila) EMBV3_03207 GCTGGTGCAGCGATGGAAACTGAAGCTTGGAAGGGTTTACTGCTTATGGTAAAATTTGCC Gene GeneID:534579|TFDP1:NM_001076029:63_cdna Constitutive 0 NULL GeneID:534579 12 GENE TFDP1 NULL transcription factor Dp-1 EMBV3_26228 TCCTGTTCACTAGCACAGAGTGATCTCAGGTCATTCCTGGGGGGAGTATATGTTTGCATG Gene BVV0102_263342 + 1 EMBV3_10638 GK000011.2:94064901-94072876 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36659 ACACCGACATGGAACAGGGACTCACTGGGGGAATTTGTGACATTCGAGGATGTGGCTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42938 TACTCTTTGCAGCTGTGATTGCACTGTCCCGCACCTGTGACTACAAGCATCACTGGCAGG Gene GeneID:616337|PPAPDC1B:XM_002698735:202_cdna UTR3_Alt 2 NULL GeneID:616337 27 GENE PPAPDC1B NULL phosphatidic acid phosphatase type 2 domain containing 1B EMBV3_23032 ACACTGTGAAGGTCCAGGTCTTATATCCAGATGGCCAGGCTCAGATGATCCACCCTAAGC Gene GeneID:505657|INTS4:NM_001110065:13_cdna UTR3_Alt 2 NULL GeneID:505657 29 GENE INTS4 MGC128653 integrator complex subunit 4 EMBV3_20403 CGTGGAGCTGGCTAAACATGTCATTTACAGCATTTACAAGGTTTCTTCTCAGACTCCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03091 AGCACATCAGTGCAGCTGTGGGACCCCTCATCCTCTCTAGAAGCAAAGCTTGCTGTTCAA Gene GeneID:504984|TRAF3IP1:XM_002686578:35_cdna Constitutive 0 NULL GeneID:504984 3 GENE TRAF3IP1 NULL TNF receptor-associated factor 3 interacting protein 1 EMBV3_21989 GCAGCTACAGAAGACAAAAGCCAACAACAGGGCAGCAGAAGAAGCCTTTGTAAATGACAT Variant GeneID:281078|CLTA:NM_174022:8_cdna 573^662 7 EMBV3_25956 GeneID:281078 8 GENE CLTA CLTA2 MGC140767 clathrin, light chain (Lca) EMBV3_37676 CTGGTGATAGTTTCTCCTCGTTTGATACTCGCTGCCAGCTATTGGTATATCCTGGAGCTT Variant GeneID:520620|NIT2:NM_001038133:75_cdna 480^554 3 EMBV3_18752 GeneID:520620 1 GENE NIT2 MGC134308 nitrilase family, member 2 EMBV3_23500 CAAAAAATCAGTTGAGTGCCTGCTGTGAGTGGGGTGCTGGGGACAGCCATGAACGAGACA Gene BVT0102_335341 + 0 NULL GK000018.2:56378723-56383936 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16117 TGCAAGTGTGAGTGATGATCATACATGCAGTTACCCTCAAGATAAGAGACCTGTCCACAT Variant GeneID:100139879|NUP37:XM_002687637:793_cdna 581^853 3 EMBV3_27914 GeneID:100139879 5 GENE NUP37 NULL nucleoporin 37kDa EMBV3_30107 ATGGACCGCTCGACCGACATTGTGAAAGCCCCTCTCAACACCTGTTGCTCTCCATCATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09909 TATCACAGCAGAGGTGATGATGGGCATCCTCAGGGACAAGGAGAGCGGCATCTGTATGGA Gene GeneID:515013|SCRN2:XM_002695915:274_cdna Constitutive 0 NULL GeneID:515013 19 GENE SCRN2 NULL secernin 2 EMBV3_20740 GATGATTCTGCTGGTCATGAGCCGGTTCTACACAGGGACGACCTGGAGTCCCTCCTGAGT Gene GeneID:784775|AIRE:XM_002685136:104_cdna Constitutive 0 NULL GeneID:784775 1 GENE AIRE NULL autoimmune regulator EMBV3_07222 TCATATCCACCCACCTGTCTGGACTGAAGGAGCCAGGAAAACTGGGAGGGAAGGAGTTGG Gene GeneID:519394|HTR3C:XM_002684894:131_cdna Constitutive 0 NULL GeneID:519394 1 GENE HTR3C NULL 5-hydroxytryptamine (serotonin) receptor 3, family member C EMBV3_24492 AGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCTCAAGATTGCGCTGAGTGATG Gene GeneID:539645|KCTD21:XM_002699061:73_cdna Constitutive 0 NULL GeneID:539645 29 GENE KCTD21 NULL potassium channel tetramerisation domain containing 21 EMBV3_07284 CCACTCATTCAAAGGACAGCTTCATATTTTCACACTTTGTCTGGGTTGGGGTCGGGGACC Gene GeneID:516875|IPCEF1:XM_002690351:10_cdna Constitutive 1 NULL GeneID:516875 9 GENE IPCEF1 NULL interaction protein for cytohesin exchange factors 1 EMBV3_02495 GGAGGACTCAACTGGCCAATACTAAAAATGAAGGAAGGTTCTGAAAATGGAGGAAGGGGG Gene BVT0102_272836 + 1 EMBV3_11614 GK000015.2:38340231-38411893 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059009 1 XLOC_036246 Coding TCONS_00059009 XLOC_036246 Coding Coding LOC784945 15:38403290-38416002 j TSS44346 1732 1 TCONS_00059009_2 125 0.145496535796767 7 0.864290771772481 0.000107373155872164 0.000132449364401911 0.000704451672002922 0.000183831074578612 6.22985567171748e-39 1.9958782653237e-05 2.11041310784312e-05 8.44932390682776e-06 0 1.20331547441375e-05 5.16363184383377e-189 0 4.02426404602225e-73 4.14376753072297e-314 0 0 0 0 3.65952622694896e-13 0.000820493832481753 2.03236675114559e-05 0 0 0 7.2225828567187e-06 6.30081345923594e-05 2.28296932689079e-22 0 1.0548622744848e-11 0 XM_001253110.2 LOC784945 PREDICTED: Bos taurus calcitonin receptor-stimulating peptide 2-like (LOC784945), mRNA. 0.0 1065 100.00 0.340069284064665 XM_005253135.1 CALCB PREDICTED: Homo sapiens calcitonin-related polypeptide beta (CALCB), transcript variant X1, mRNA. 3e-54 217 71.63 0.241339491916859 TCONS_00059009_2 sp|P10092|CALCB_HUMAN CALCB_HUMAN Calcitonin gene-related peptide 2; 2e-31 112 50.86 0.896 1 coding 0 0 0 0 -0.0630717725112291 0.679895793136835 0.0465348794695771 0.444653516747244 GGGTGAGGTGATAGGAGGACTCAACTGGCCAATACTAAAAATGAAGGAAGGTTCTGAAAATGGAGGAAGGGGGCCTTGAGCCAAGGAACATGCTGGCCACTAGAAACAGGAAATGGAAAGGAAATTAATTCTTCTCTAGAACCTCCAGAAAGGACCCAAGCCTGCCAAGAATTTTGCAAATTGAGCACCACATTGGACCTGTGACTTCTAACCACAGACATGACTAGGAATGGAGTGGGATGCGTGCCTGTTCAAAATCCTTGAAACCGAACAGTGCAAATTCAAGTGGGATGGTACTTCTGGATGCTCCATGTTCTGGATGCAAGTGGTGACATAATCCTTCTGGGGCTCACATCCTTCCCCTCATTGGTTGCCTGGAGCTCCTGGAACCCCCCCTAGACCCAGAGCAGCGGGAATAAAAGCAGCTGCTCGCGCTGGGAGGTTTCAGAGGCATTCAAGTGTCTCCACCACTTCTGCCAGAGTGCCATTGCCCACCGCCAAAGCTACTGCTGCTGCTCCTTCCTCTGCTCCCAGCCACCTGGTGCCGGCTATCAGAGAGGTATCATGGGGTTCTCGAAGCTGCCCCTCTTCCTGGTCCTCAGCATGCTGATCATCCACCAGGCAGGCATGCTCCAGGCAGCACCATTCAGGTCGGTCTGGAAAAATGGCCTTGTACCAGCTACACTCACTGAGGAGGAATCGTACTTCCTACTGGCCACAATGGTGAAATATTATGTGCAGAAGGCCAGTGAGCTGGAGTATGAAACTGAGGACTTCGGCATCATTGCCCAGGAGAGAACCAGTAATGCCGCCACTGGCATGACCCATAAGATGGCAGGCTTCCTGGGCAAATCTGGGAGCAAGATTAAGAGGAACATCATGTCCACCAACGTGGCTCCAAAGCCTTTGGCCGGCACCACAGGGATCTTCAGAACCAAGTAGTGAAATAACTCCAGGAAGAAGTGTCTCCTGGTGATACTGAGATCATCTGCCGGGAAACATAGATCCTATTCATTTCAAAACACTGTTCCAGACTTCTCTGGTGATCCAGTAGTTAAGACTGCACACTTCCACTACAGGGGGCAAACGTTCGGGCCCTGGTTGGGGAACTAAGATCCCACATGCTTAAGATCCCTCACTGCAACATGCCACACCATGGTGCAGAAAAAGCAAGCATACAAACAAAAACTGCTCCTTGCAGTTATAATTGTGATTATTCTAGTTTTTGAGTTTGAAAGGCAAAGACCCGACCCTTTGAGAATATTCCCTACAATGTCATCTGGATTCAGAGATAGACTTGGGTTCAAATACTGTGTCCTCTACTATGTCACCATGGGCCAAACCCTCTATAAGCCTGTTTCCCCATTTAACTTGAAGGCAACAATACTAGCTACCTGTTAGCAGCTGAACTCTATTCTTGTAATTTGCAATGAAAGAAACTTGCAGAAAAAATAGCATGGAAGACCCGCATGTATGCATGCTTGATGTTGAAAATGTTCTTTTCCTTGAAGTAAACTGAAGCTAAATGCAAAATAAAATCATTTGCAGTTATCTAGTGTGCATCTTTTAAATATTTGATTCTATGTTCAGTAAATATGATTCATGTCTCATCGGCTTATCTGGCAGAAAATTAGGGCCCTGTCAGCCAACTTTGCCAAGAGGTATTACATCCATTATGAATTCAAACTAACTTAGTCTTCACAGACATATTTTGTCCTTAGAAGTATTTTGA EMBV3_43543 AGGTGTGTAACCCTCTGGACTCTCTTGATCTCGACAACACGCAGCTGGACTTTGTGGCTA Gene GeneID:517588|GLI1:NM_001099000:1028_cdna Constitutive 0 NULL GeneID:517588 5 GENE GLI1 GLI MGC159896 GLI family zinc finger 1 EMBV3_06524 ACGCTGCCGGCTGTGCTTTCACCGAGCCTGCCAGTTTTGCCTGTTTCCTTTTCTAGTTAA Gene BVT0102_096863 + 1 EMBV3_17679 GK000003.2:19756234-19762894 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38687 AACTTCCTACTCTGATCTGGAACTGCCAAGGAAATATAAGCGAACTGGCCCTTGTCCGGC Gene GeneID:617494|NDNL2:NM_001078080:142_cdna Constitutive 1 NULL GeneID:617494 21 GENE NDNL2 NULL necdin-like 2 EMBV3_35312 TTTTGTCATTTTACCGATATAGTACATGAAGCCAAAGAAAACAATAATGGTACTAATAAA Gene GeneID:504741|COLEC12:NM_001101843:38_cdna Constitutive 2 NULL GeneID:504741 24 GENE COLEC12 MGC155255 collectin sub-family member 12 EMBV3_11793 GAGGGCGAGTACAGCAGCCTGGAACACGAGGCTACAAGGAACACAGGGAAGAGTATTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17149 GGTGGTTCCTATGCCACTTTGCTGTCCTGAACACCCCAGACCTAATTGTGTAAATAAGAG Gene GeneID:538915|WDR43:XM_002691448:273_cdna Constitutive 2 NULL GeneID:538915 11 GENE WDR43 NULL WD repeat domain 43 EMBV3_20929 TGATGCGTACTTGGAGAAAGTGGTGACACTGTACCCATACACCCGCCAGAAGGACAACGA Gene GeneID:529835|ABI3:NM_001083454:117_cdna Constitutive 1 NULL GeneID:529835 19 GENE ABI3 MGC138093 ABI family, member 3 EMBV3_28127 GCACCATCTCTAGTCCTGTTGCCAGGTACCCCAACTCTCTGCAATGCGTGAACATCAACA Gene GeneID:613993|KLK14:XM_002695217:942_cdna Constitutive 0 NULL GeneID:613993 18 GENE KLK14 NULL kallikrein-related peptidase 14 EMBV3_12414 GACACCTTTCTCAATAATGTGGTGATGTATTCTGGAGCTGTGTTCCTGGCTGGGGGTTCC Gene GeneID:533983|LOC533983:XM_002688630:437_cdna Constitutive 0 NULL GeneID:533983 7 GENE LOC533983 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_07348 CCCTGCAGTCGGACAGGAAAGAACTGAATATGTCACCCTTCTGATATTCTAAGGCAGCTG Gene GeneID:616476|HNRNPUL2:XM_002699294:238_cdna Constitutive 0 NULL GeneID:616476 29 GENE HNRNPUL2 HNRPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 EMBV3_34547 ATAGTATGACACTCCCTCCTAATGGGCAAGGCAGCAAGCCACAGCTCCCAGTTGGTCATA Gene BVV0102_112466 + 0 NULL GK000004.2:70117258-70184736 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02699 AGCTCGCACAGCCAGGTCCTCCGCCCAATCCCGCTCTTTTTCTGTTTGACCGGAAGTTTA Gene GeneID:508931|ZNF624:XM_002695857:323_cdna Constitutive 0 NULL GeneID:508931 19 GENE ZNF624 NULL zinc finger protein 624 EMBV3_06482 CAGAGTAAGTAGAATTATTTTCTGGTTGGAGTTCGTGCTGCAGCAGCCCCGTCAGTCTCG Gene BVV0101_025756 + 0 NULL GK000003.2:42669435-42703660 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241406 TCONS_00173129 TCONS_00218885 TCONS_00235856 TCONS_00173128 TCONS_00037853 TCONS_00185879 TCONS_00233184 TCONS_00048507 TCONS_00120346 TCONS_00174404 TCONS_00109063 11 XLOC_148070 XLOC_104301 XLOC_132204 XLOC_144309 XLOC_021682 XLOC_111932 XLOC_142666 XLOC_028639 XLOC_073143 XLOC_104604 XLOC_064968 Coding TCONS_00218885 XLOC_132204 NonCoding NonCoding - 7:10128477-10129746 - TSS162883 1269 2 TCONS_00218885_2 36 0.940898345153664 1 0 3.5738614482064e-06 0 0 0 3.8906132586167e-07 1.15883759786575e-06 8.7732549526146e-07 0 3.52330952855172e-06 0.00013164185747269 6.82175791047059e-05 0.000239342326857858 3.13364371722407e-05 0.000118263960939489 4.1416580641957e-05 0.0402028128599499 0.0132570802079862 0.0273037195919152 2.11906793639353e-06 0 3.98703147195361e-07 0.00784279868617422 0.0106058797808052 0.0193842245070306 0 0 0 0.000713639753476594 0.000280669329084988 0.00164464512407208 XM_003582999.2 LOC100852009 PREDICTED: Bos taurus uncharacterized LOC100852009 (LOC100852009), 0.0 1009 89.88 0.574468085106383 NM_002736.2 PRKAR2B Homo sapiens protein kinase, cAMP-dependent, regulatory, type II, beta (PRKAR2B), mRNA. 5e-06 57.2 84.31 0.0394011032308905 0 noncoding 0 0 0 0 0.0770435826779018 0.678435328218526 0.014242223892218 0.756893739652363 AGCTGCTCCAGTGGCGGTAAAATCCAGTCGAGAGTGTTCCAAGGTCTGTATTTGATTATGAAGTTTCCCTAAGTCAGGCCAATATCAGAACTGTTCCAAACACCTGAGATATGATTTTTAATCTTTTCCCATTCATAATCTGTCTCGTTTACCTTCAAAGATGTCACGCATATCCACCTGTAATCAGCGTGGCACGTCAAAACCATCTTCACCTTTAAAGCCTGTAACTCAATCCCAATATGCATAATTGCTTCTTCTAAGGCGTCTACTCTTCATCTCTAATTTCCTATCTATAGCTTCCTGTGTTGCTAGAGTTAAAGAAACAATTTTAGACATGGTATCAACATATTGGGCAGTATGCACTTGTTGAGTCAATGATACTGCTGCCGCAGTAACAGAAGTAATTGTTGCTATCAAAGCTGATATTCCTAGGATAAGCAAGACCACAAACCGTCGCGATCGCATTAAATCCTGCAGTTGTTGTAACACAGTAAGACCATAGCTATCATATAGGCACCATAAGATAGGATGGGCATTGTAACACCACAAAGGAGCAAACATTACATTGAGGGTTTAAACAAGATGAAAGCATACATTGTTCACAAGTCACTACGTTAGGTCCACCTGAATAATTCATGCCTACATTAAGTTTGTTGGAGTCATTAGTAAAAAGGAAAACATAAGGCAAGGGTGGATAAGCTAAAACAGAATAAGTAGAATTATTTTCTGGTTGGAGTTCACGCTGCAGCTGCCCTGTCAGTCTCGCCGGGATCTCGATGTTTATCTTGTCTCCCCTGCCGGTGGGCTCCTCTTTTGTGATCGAAGCAATGGGGGAACTGGATGTCTGGGGGTCTGCAACATGGAGAATCAACCTGTCCCGGATCTAAATTGGAGAATTTGCATCCTGTGGAAAAATACAAGCACATCCTCGACCGCTAGTTAATAATGGGTCAGGACCCTTCCATTGTCCTGAGAGCAGGTCCTTCCATTTGACCAACGGCTTTGTATTTGTTGTTCCGGGCACCAATGGCGAAGCATTGCAGTAGTTCCAGCCTAAACGGCATTTAAAATATTTATTACAAAAAGAGCAAGTTGCAAGATTTGATGGGGAGAGCTATACTTAAACTCCCCTTCTTTTAATTTTTGAATTTGAAGCTTTAATGTTTGATGTGCTCTTTCCACAATGGCTTGTCCCCGGGGATTATAAGGGATGCCTGTATTGTGTTTAATTTGAAACTGTAAACAAAATTCCTGAAAAGACTTAGAAAN TCONS_00211744 . 5' 10947 TCONS_00211744 . 5' 10947 EMBV3_28341 AGAGACTGCCCATCCCCAACTCCTCTTGACAGCTAAGATTTGCCTCACTCAGCATTCCTG Gene BVV0101_064647 - 1 EMBV3_02604 GK000015.2:35671015-35693294 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00064275 1 XLOC_038999 NonCoding TCONS_00064275 XLOC_038999 NonCoding NonCoding - 15:35673723-35674248 - TSS48018 525 1 TCONS_00064275_1 38 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.95998468643721e-06 0 0.0013080007798478 0 4.77923984092577e-05 0 0 0 0 5.24231063430877e-05 9.57979419020373e-05 0.00034312555003083 0 1.11602795532773e-05 0 0 0 0 noncoding 0 0 0 0 0.143377627997418 0.208786089341214 0.0370408492891431 0.603391795028599 CCATTTTTATTAACATTTAAAGATTAATCAAATTTACATTAAATAAGTCTACTTATGTTATCATCTTTTCCAATTTCACATATTTTGAATTCCTGCAAACACACAAGAAAACATATCTTCTAATATGTTTGCTAGTCTTTCATTCAACCCCAAAGCACACAGCAGACGCTTCACAAATGTTTCTGAAACAAATGAGTTTAACATGGTAAAAACATATATTCCAATAAAAATAAAAGAATAAGGCATATTATACTATGCAAGGATCCATTGATTATGAAAAGAAAAGGGAGAATGACTTTGTTCAGAGCCCTTTGACAAAACAGAGACTGCCCATCCCCAACTCCTCTTGACAGCTAAGATTTGCCTCACTCAGCATTCCTGAAGGGTTTTCTGATCACTGACTCACATAGCCTGGCCTCTTTTTCTCCCACTTTCTCTCTCTGAAACCAGGTTCCCACTGGGAGAACTTGTTCTCTCTGCTGCTCCAAGCAGGACCATTTTCGCAAAGATTTGTCTCTTATGTGG TCONS_00061071 . 5' 2499 TCONS_00061071 . 5' 2499 EMBV3_40521 GCTCTGCCACAATTACTTTGTATTTGGTGCTGACAGAGCTCTTGAGAAAGTTCTATACAA Gene BVT0101_024203 - 0 NULL GK000023.2:2953602-2956931 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133764 TCONS_00133763 TCONS_00133767 TCONS_00133765 TCONS_00133762 TCONS_00131981 TCONS_00133766 TCONS_00133768 2 XLOC_081204 XLOC_080686 Coding TCONS_00131981 XLOC_080686 Coding Coding RAB23 23:2936012-2956684 = TSS98848 3865 1 TCONS_00131981_1 237 6 0.813313337526003 0.00326721548250836 0.00345951608825504 0.003205496063719 0.00187277781774848 0.00188462460200699 0.000729059807696336 0.00213734143939969 0.00176170064126029 0.00368468963246713 0.000149135442686091 2.895267746807e-06 1.41328000803278e-56 0.000535201563837691 0.00028354192612282 0.00118904888882808 0.00663273787307766 0.000175708145432942 0.0016711286036773 0.00265767829935843 0.00256385167809704 0.000941354701565412 0.0018853086107696 0.00175696882517974 0.00356940220367872 0.00331290796687928 0.00255435449046561 0.00196722602541335 0.000460874436590636 0.000210893662949555 0.000987010019894246 NM_001206906.1 RAB23 Bos taurus RAB23, member RAS oncogene family (RAB23), mRNA. 0.0 1288 100.00 0.184476067270375 NM_183227.2 RAB23 Homo sapiens RAB23, member RAS oncogene family (RAB23), transcript 0.0 1750 84.06 0.422250970245796 TCONS_00131981_1 sp|Q9ULC3|RAB23_HUMAN RAB23_HUMAN Ras-related protein Rab-23; 4e-169 471 94.94 0.9957805907173 4 coding 0 0 0 0 0.0157011973165968 0.892620590563115 0.0277455556388673 0.643136950044541 CAGGTTTGAGAGAGAAGATCTGATCACCTGGAATTAAAGTTGGCACAGAAACCTTTTCAACTCCAAAAATGTTGGAGGAAGATATGGAAGTGGCCATCAAGATGGTGGTTGTAGGGAACGGTGCAGTTGGAAAGTCAAGTATGATTCAGCGGTATTGCAAAGGCATTTTTACAAAAGACTACAAGAAAACCATTGGAGTTGATTTTTTGGAGCGACAAATCCAAGTTAATGACGAAGACGTCAGGCTCATGTTATGGGATACAGCGGGTCAGGAGGAGTTTGACGCGATAACCAAGGCCTACTATCGAGGAGCCCAGGCTTGTGTGCTTGTATTTTCTACCACAGACAGGGAATCTTTTGAAGCCATTTCCAGTTGGAGAGAGAAAGTGGTGGCTGAAGTTGGAGACATACCAACTGCACTCGTACAAAACAAGATCGATCTCCTGGATGACTCTTGTATAAAGAATGAGGAAGCCGAGGCACTGGCAAAAAAGTTGAAGTTGAGATTCTACAGGACTTCAGTGAAGGAGGACCTGAATGTCAGTGAAGTTTTTAAATATTTGGCTGAAAAATATCTTCAAAAGCTTAAACAACAAATAGCTGAGAATCCAGAATCAATGCATTCAAGTAGTAACAAAATTGGGGTCTTTAGCACGTCTGCTGGGAGTCACTTGGGTCAGAATTCAAGTACCCTCAATGGTGGAGATGTCATCAACCTCAGGCCCAACAGACAGAGGACCAAGAAAAACCGAAATCCTTTCAGCAGCTGTAGCATACCCTAACAGGCCTCAGGGAGGAGGAAATGGAATTACATTGTGCAGTAAGACACGTCCAGCTATCACAGTATGTTACACGATGTTTCGCAGACTTTGCACCTAATCGGCTGTCTGAAAATTGACAGACTTAAACATTATTCTGCAGTGCTTTTCAGAATGGAGCAAGATCTCTGAAAAATTACTGCCCTGTGGACTCATTTTAATTTTTTTACATTAGACGAAGCTTCTCCTGTTATTCAAGGAACGATATAAGAAACATCAAAAACAGGTTTTGCTGAATTTGAAATGCAGAAACACATAAATGAAATGCCTAAATATATTGGTATAGATTTTAATATTAGGGGTCAAGGAAAGATAGCAGGCGTTCTTTTTCTGAAATTGGTCATCTAGCTTTTCTGGGAAATAATATTGACTCTGAATACTTACAAGAATAATATTGAAAGGCAAGCCCTAATCTTGCCAGACTGCATTAGTGTGTACTTTATGATGTTAGTTGTGCGATGTCTGTATATGTGGAACATGGAGGTGTGTGCACACAGATCCCTGGTTCTGGAGTAAAGGAAGGTATGTGCAGTGTTTAAGGAAACATGGAATCTAACTTGTTCATTCATGAAACCATTTACACACTTACGTGTATGTTCTAAGTTTTAATTTTCAAATGAGAAATTCCAGATAGATATTTTGCAAAATGAGGTTGACTTTAAAAAGTGCTTTGTGCCAAAAATCTCATACCTAATTCTCAGTGCTTTACTAGAATTTATACTGTTGGTAATCTCTTTTAAAAGCAGCTTTCCTCTCTAACAGGGTAGATGAAAGAGGCGTGTAAGTGCATTAGTGCTGGAGCCCCTCCCAGGTGGGCCTGGTCACGGGATCTTTTCCACGTCCCTGCACGTGGGTGGTGGGCTCGAGCTGGCGGCTGCAGGACCCCTGCCCTGGGCAGCGTGGCCACCCCACGCCTGGGGCCTTTTGCTGTTGACAACACAATTCTGAACTTTTAGGATTATACTAGCAGTTTTTTTAAACATACAAGAGGTGATTTTTTTTTTGTCTTAAACCACATTACCGATTTTATAATGCCCTGCAACTCTAAAGCTTCTTTTTGTTTACACATTTTTATATGTTTTTTTCAGGTTATAATTTTAAAATTTCTATAATCTTCAGTTTGTATAGAACTTTCTCAAGAGCTCTGTCAGCACCAAATACAAAGTAATTGTGGCAGAGCATACATTTTGTGATTTGGACAGTAGCTTTCCAGTGCAGATAAATAATTGCATGAACTGTACTAAAAGTGGTTATCATTCATCGATGACTTGTTTTTAACCCCTTGCAACATATACCTGGTCTTTACAGGATTTAAAAATATGTGAAATAACTTTTCTTAGAAAGTGTGTCACATTTTTAATTATTTGTACTAAATGCATAATGTCTTATATATTCCTTTTATATGTTTTCTCTTTTTTTAAAGTCTGCCATCTGCACCACCCTCATCCCCCTGTCCAGATTAATGTTGAGAACAGAATAGAATTTTTTAGGACATGTCTTTAAATGGTCAGGAGTGAATGTTTGCTTTTCATAATATTGAAATAATCGGGCATTATCTATTTCAAAGTAATATAAAATCTTTATTTTTATGTCACCAGTTGTCACCACTCCCACTGCTGGCAGTGGGGTAGGTGTTGGGAGAAAACCCTGTTCCTGACGTTGGGTGCCCACTGGCAATTCATCTTCCCTTTTCTACTCTCTGGAAATACAGTCCCTTTAATTTTTGCACAAAATATATTTTTCAGCAAACAGTCTTTATAGCAGAAAAATCATGAGATATAAAATGTTGTAGTTCTATTTCACATTAATTAAATGTATGTGGGTAGAAGTTTGTTATTTTTCTATATAAAAAATGTACTCTCTGATGATGGTTGCAGTTCCCTTGATATCTGTAATATAATCTTATGTAGTTTTATTTTTTTAAGGAGAACTGGGATCTTGGTTACACGTTTGAATTTTTAATTTGCAATTCTGTATTTTACCTAACCATAATTGGTTAATTTAAATAATTAAATAGGCCCCCAAATCAGTCTCAAGTTACTTTCTCAGTTTGTAAAACCTTCAAAACTGACACTAAATTTTTTTGCTGAGACCTTTAATTCTTTTAAATAACTACTAATTTCTGAACCGTGGCTGCTAAAGAAATAAGGCCCCAGGACACTGTGCATCTGTGCACTGATACACTTTTCTACATCGTGGCTGGTCCTCTGCTGCGGTGTGGTTGCCTTGTCTCAGAATGCTCAGGATTCCTTTTCCTCTTTCAGTCTGCCTGTTGAATTAATAGCATATAGAATAGCCCACATGAAGCAACAGAATTATATTACATCAAGCGAAATGGTTTCCTTTTTATCTGCCCAAAGCTGACAACACTCGTGTACTTCTTCAAAACCGAGTGAAACTAACATTACCAAGAAGAGCCCGTCCCACCGTGGCCTGAGCGCACGCTGATCTGGGTGTCCCCGGAGCTGGCAGTGCCGTGCGTGGGCAGGATCACTGAAGGGCCCCTCTGTGCCCGGAGTCCAGGCTGGGCTCTCCTCTGAGATCCTGGACTTGGCTGCAGGACCTGACATCCCAACTTAAAGACTGTCAGATTCTTGCCTCCTTTTAAACACCTTTCAAATAGTTGGTAACTTGCTGAGGTCCTTCCGTCACTAGGGTGTGTTTTTCTGGAAACAAAATGAACTGATCGGTGAAAATCTGTCCCACGGGCAGTCATCTGGTGAACAAGGCAGTCCTGGGCTGAACTGGCGTGAATGGGAAGGGGAGGATTCCCAGATGCTGAGAGTCTATGAGAACTTGAGGAAAACCTGGTTGTCTGCTGATAAAGAAAAAGATGGAACAGAAAATCTTTTATCTCGTAGTGAACCTGATGATAGCAAATGAGCTTGACAAATCAAGAGACTTTGCTAGTTATCATTAAGAATTAATGTCTCCCATGAGAAGAGACATTTACATAAGGTGGACTTGGGCTGGCATTGAAACTACCATGAATGTCCTCAGAGTGTAACTGCTTTTTATGAAAAGACATATAAATATATAAAACCAGT EMBV3_33223 GCTGCCGGAAAACCTACTTCAAAAGTTCCCACCTCAAGGCTCATCTTCGCACTCACACAG Gene GeneID:616730|KLF11:XM_002691483:373_cdna UTR3_Alt 2 NULL GeneID:616730 11 GENE KLF11 TIEG2 Kruppel-like factor 11 EMBV3_31681 GTTAGGCTCCGCCAAAGAACAGAGATACCAGAGAGGCCTAGAAAGGAATGATAGCTGTGG Gene GeneID:789694|LOC789694:XM_002696085:42_cdna Constitutive 0 NULL GeneID:789694 19 GENE LOC789694 NULL similar to nuclear fragile X mental retardation protein interacting protein 2 EMBV3_26332 CAGTACCATGGATGTGAATGAACTCATCCTTGCTGTGAGCACCCAGGAGCCCTTAAAGAG Gene GeneID:538777|SRP68:NM_001101179:8_cdna Constitutive 0 NULL GeneID:538777 19 GENE SRP68 NULL signal recognition particle 68kDa EMBV3_18594 CTTCCTGCTCAAGACACCGATTTCGCTACATTCCACCCAACACACCAGAGAATTTCTGGG Gene GeneID:512977|RBBP8:NM_001101966:19_cdna Constitutive 0 NULL GeneID:512977 24 GENE RBBP8 MGC139117 retinoblastoma binding protein 8 EMBV3_18199 AAGAGCAGTTCTCCCCGCCACAGGGAACCATCAGCTTGGACACACCTTCAACTCAGCCTT Gene GeneID:790067|LOC790067:XM_002692593:343_cdna Constitutive 0 NULL GeneID:790067 14 GENE LOC790067 NULL similar to RIKEN cDNA D730001G18 EMBV3_27399 ACACCATGTGCACCCTGGACTTCTATGAGGCGGCCGTGGTGTGCGTCACCCTCCTCAACC Variant GeneID:515029|UPP1:NM_001098976:1_cdna 720^866 2 EMBV3_02223 GeneID:515029 4 GENE UPP1 MGC152519 uridine phosphorylase 1 EMBV3_07346 CAGTCTGTGCCTCTTGTCTACCTTTGACCACCACTCATCACTCACATTGATCACAGGGAC Gene GeneID:539371|ZBTB9:XM_002697180:224_cdna UTR3_Alt 1 NULL GeneID:539371 23 GENE ZBTB9 NULL zinc finger and BTB domain containing 9 EMBV3_20835 GATTTGTAATAGGAAATTCCCCTCAACCTTTTAGAACTGAATCTAATACTAGCTGATTTC Gene GeneID:532359|FOXK2:XM_002696128:244_cdna Constitutive 2 NULL GeneID:532359 19 GENE FOXK2 NULL forkhead box K2 EMBV3_08492 AACGCCATGGTGATTGGGAAGATTGGTCTGGCATGTGTGGTCCGTGGCCTTCTCTTTGTT Gene GeneID:531174|LOC531174:XM_002693254:540_cdna Constitutive 0 NULL GeneID:531174 15 GENE LOC531174 NULL similar to olfactory receptor Olr154 EMBV3_22000 TCGGGGGCTTGTGGAGTGCTGTGGGATCGTCCACAGTGTGTGAGAGGGGAACTCCCATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24592 TCCAAGACGATCCCACATGCCACAGAGCACCTAAGCCCATAAGCCATAACTACTGAGCCT Gene BVV0102_105861 + 0 NULL GK000007.2:19210710-19220571 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219398 1 XLOC_132717 NonCoding TCONS_00219398 XLOC_132717 NonCoding NonCoding - 7:19215961-19216224 - TSS163396 263 1 TCONS_00219398_1 37 0.908745247148289 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00140594241256917 0 0 0 0 0 0.000141077460601954 0 0 8.78133211582462e-06 0 0 0.000462606310182476 0.000110751256481894 0.000396244470250569 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 4e-37 158 82.58 0.585551330798479 0 noncoding 0 0 0 0 -0.457398191570644 0.125143929556932 0.100675310119713 0.0726658166581168 GTATGGGGCTTCGCTGGTGGCTTAGTGGTAAAGAATCTGCTTGCCAATGCAGGAGACATGGGTTCGATCCCTGGTCCAAGACGATCCCACATGCCACAGAGCACCTAAGCCCATAAGCCATAACTACTGAGCCTGTGCTCTAGAGCCCGGGAGCCACAACTATGGCAACTAGACAGTGGCTCCTGCTCACCACAACTCGAGAAACAGCAACGAAGACCCGGCATAGCGAAAAATAAATAATAAAGATGTATGATAAATAAAGT TCONS_00212248 . 3' 3881 TCONS_00212248 . 3' 4143 EMBV3_18671 TCGGGCAGCTTTTGGAGTACCAGATCTTGATGTTTCCACACTCTTTCGGGAGATAGCTGG Gene GeneID:530756|LOC530756:XM_002686255:57_cdna Constitutive 0 NULL GeneID:530756 3 GENE LOC530756 NULL similar to acyltransferase like 1B EMBV3_37298 CAGCGAGTGGTGACACTACCTGCCCCGGACTCCTTAACCACTGCTTAGAAGGAAAGTACT Gene BVT0102_356957 + 0 NULL GK000016.2:52184134-52203711 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06790 CCAGGCCCCTCCATGCATGGGACTCTCCAGGGAGCAATGTAAGGCAGAGCTGGGATCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10022 ATCCTTTTTTGACAGGTGTGGGAACAGGTCCCGAGATGGGAAGGATCACCGAAACGACTA Gene BVT0102_232307 + 0 NULL GK000007.2:64587898-64650883 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34501 TTTCGCGCCTGTTCTGTGACGTCACTGCAGAAAATGTGGGACCAAGAAAAGGACCACTTG Variant GeneID:504771|COQ7:NM_001014849:308_cdna 138^316 1 EMBV3_10793 GeneID:504771 25 GENE COQ7 MGC133656 coenzyme Q7 homolog, ubiquinone (yeast) EMBV3_19608 ACGTGCTGTATGCTGACATCAAGATGGAGAATGGGAAGTCCAAGGGGTGCGGTGTGGTTA Gene GeneID:515290|HNRNPM:XM_002688875:100_cdna Constitutive 4 NULL GeneID:515290 7 GENE HNRNPM HNRPM heterogeneous nuclear ribonucleoprotein M EMBV3_25652 TCTACAGGTTCACCAGATAGAGATGGAATTAAGAAAAGCAATGGAGCACCAAATGGATTT Variant GeneID:100139116|SGIP1:XM_002686324:100_cdna 826^897 3 EMBV3_18678 GeneID:100139116 3 GENE SGIP1 NULL SH3-domain GRB2-like (endophilin) interacting protein 1 EMBV3_13338 GCCTCTAAGGCCAAATCCTAACACCAGTCCGAAATTAGTCTCCTCCCTTCTGCATGTGTC Gene GeneID:510082|PRPH:NM_001102378:59_cdna Constitutive 0 NULL GeneID:510082 5 GENE PRPH MGC159782 peripherin EMBV3_08262 ACTTCTGGGGAAGTGGAGGCTGCAGGACTGTGGAGGCTTAAATGTAAACTGACTCTACCT Gene GeneID:538936|ARL4D:NM_001076135:266_cdna Constitutive 0 NULL GeneID:538936 19 GENE ARL4D MGC143030 ADP-ribosylation factor-like 4D EMBV3_02520 CTGCTGGAAATCAATCAGAACATCTTCACGCACTCACGGCAAGGACACCAGTGCAGACCT Gene GeneID:618674|C25H16orf71:NM_001046621:318_cdna Constitutive 0 NULL GeneID:618674 25 GENE C25H16orf71 C16orf71 MGC137290 chromosome 16 open reading frame 71 ortholog EMBV3_12167 CTACCCAGTATGTAGTTAATTGGCAATGACATTTATTAGCTGAAAGCATGCTTGGCAGAG Gene BVV0102_034975 + 0 NULL GK000003.2:114716813-115210339 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180361 1 XLOC_110129 NonCoding TCONS_00180361 XLOC_110129 NonCoding NonCoding - 3:115027541-115028154 - TSS135120 613 1 TCONS_00180361_1 36 0.0701468189233279 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0116730484830863 0 0 0 0 0 0 2.73485087993179e-05 0 0 0 0 0 0 XM_005209666.1 HAVCR1 PREDICTED: Bos taurus hepatitis A virus cellular receptor 1 (HAVCR1), transcript variant X1, mRNA. 2e-07 60.8 89.36 0.0717781402936378 0 noncoding 0 0 0 0 -0.190573759049431 0.154487850992887 -0.00586015312049173 0.904762174438438 TAATTCCTCTGGAGAGAAAGTCATCAGCCATGATGATGCGTGGCTAAGGTTTTGAGGCTGTAACAATGTGATGACTGCTAGAATGTAGGTCTTTTCTACCCAGTATGTAGTTAATTGGCAATGACATTTATTAGCTGAAAGCATGCTTGGCAGAGCTATCTAATTCAGCATAAGTGTAAATAGAAGCAAAATATGTACCCCAAGAGTCTCTTGTAATTTTTATCTTTTCTTCCAAGATTTTTCAGTAGATTAACATACATTTGCTTGCTTCAATAGGAATGTGAAGATACACAGATGCATTTTTGAAGGAATGGAAATAAACGCTAAATGTTTGCAATGAATGTTTGAGAAGCCAGATCAGTAAACCCTCTCATTTAATGATCTCAAACAAACATAGATATTCTTATAGATCAATGAAAAAATCTTTCCTCTTTACATACAAAATGGATTTTCTTAAAGGCTATAAGATTTATTTAAACAACATTTAAGGCCACAACAGTCATAAGCTAAAAAAAAAAAAAACAAAAAAAAAAACTGTGTCATCTAATTATTCCTGAGCATAATGTGCTCAGTCCTGTGTGATTCTGTGACCCCATGGACTGTAACCCACTGG TCONS_00171450 TCONS_00171451 . 5' 104367 TCONS_00171450 TCONS_00171451 . 5' 104367 EMBV3_03365 CTGGGCATCAGACAGTGGGAAAGCTCCAGGGATCTACCATTCAGAGACTTCAGTTTGGAT Gene GeneID:319095|ADCYAP1R1:NM_175715:10_cdna Constitutive 0 NULL GeneID:319095 4 GENE ADCYAP1R1 PACAPR adenylate cyclase activating polypeptide 1 (pituitary) receptor type I EMBV3_27570 GGAGGTGTTCCCTTGGCCACATACATGCGAATCTACAAGGGTGATATTGTAGGTATCAAG Gene GeneID:614067|RPL21:XM_002691576:84_cdna Constitutive 0 NULL GeneID:614067 11 GENE RPL21 NULL ribosomal protein L21 EMBV3_26503 CTGCAGGGTCATGTGCGGCAATTGGCAACTATATCCAGAGCGTTTCAATCTAAGTGTTTA Gene BVT0102_329325 + 1 EMBV3_42671 GK000009.2:77375548-77491105 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06163 AGCCGTTGGCTTTTCGTTAGGCTGCCCGGCCTACGTGCAGCTCTCTTCTGAGTCCAAAAA Gene BVT0102_358497 + 0 NULL GK000023.2:17151447-17151842 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32689 CAGAATAAAGCCCTCAAGTCCTAAGGTTCCCTTTGGGTAGGAGAGATGCATGGTTTCCCC Gene BVT0102_361947 + 1 EMBV3_10560 GK000016.2:42409769-42440210 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16566 AAGAGAGAAAACTAGTGCTTCCAGTCCCTCTCCTCGGGGCCTTCACAGTGCAGGGGCAGA Gene GeneID:100125880|BLES03:NM_001105480:438_cdna Constitutive 0 NULL GeneID:100125880 29 GENE BLES03 C11orf68 MGC139037 basophilic leukemia expressed protein BLES03 EMBV3_40904 GGGTTCGAGCCCAACTTTATGCTCTTCGAAAAGTGCGAGGTGAATGGCGAGAAGGCGCAT Gene GeneID:281209|GPX1:NM_174076:25_cdna Constitutive 0 NULL GeneID:281209 22 GENE GPX1 NULL glutathione peroxidase 1 EMBV3_00629 GGACTTGTGTATATACACATCGTGTATAACCCCACCAGCTTGTTTATTGTCAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_02928 TCATTGCCATGATCTGCTATCGCAAGAAGCGGAAGGGCAAGCTCACCCTGGAGGACCAAG Gene GeneID:281439|DAG1:NM_174162:31_cdna Constitutive 0 NULL GeneID:281439 22 GENE DAG1 RAB7 dystroglycan 1 (dystrophin-associated glycoprotein 1) EMBV3_30642 CTGGTCTGCTTGAGAAACTTAAAGAACTAGTTTGGCGATCGGCAGCATCTCTGGCCATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26081 CCCTTCACCTAACAGCTGGGAGTGAGTTTAATTTTAGTGTAGGTTGATCTGTTCCTCTAG Gene BVV0102_365571 + 0 NULL GK000030.2:111546085-111587713 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253549 1 XLOC_156489 NonCoding TCONS_00253549 XLOC_156489 NonCoding NonCoding - X:111559339-111561156 - TSS190770 1817 4 TCONS_00253549_3 58 0.259768849752339 1 0 7.48799596628653e-06 2.48860753385235e-05 8.42550514921727e-05 6.93155183482628e-05 4.7551300814841e-05 5.3153842823682e-05 6.4190481152395e-07 1.46484076510915e-05 0.000357524735481721 1.13222480769937e-06 0 0 0 0 5.70034989978006e-07 0 0 0 0.00014273446722535 3.95785430853243e-06 3.34147508981334e-06 0 0 9.22655831608134e-06 2.71156899317821e-05 4.30835970849453e-07 1.61230914822719e-06 0 0 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 7e-120 435 94.31 0.15410016510732 0 noncoding 0 0 0 0 GTCATAAAACAACTCATGCAAACGGTTACTAGAGAGCCTACCCAGGGTGGGCAGCTTCAGTCAGTGTGCTTCCCCTAAAAACCCTGTGATTGCCTGGAAGCCATGGGCCAGCATCACAAGAGAGGACACAGGGCATATTGCTAGCCTAGGACAAGATCCAAATTCAGAATTTCAAGTACAGTTTATGTAAAGAGGAAGGGTTCATTTTGACTCCATGCTGAATCTATTTCTATGACTCTAACCCTTGTTTTGGCCATTTGAGTAACTTCTCTCTGTGTGTGCAGCAGTGTGATGGAAACTTTGGCCATCCTTTACTCTTGATTTCCCTTGCAGAAGACCGACGAACACAGTCAGTCACTGGAAAGCAATTTTTATCACCAAGACACAGCTGCATTTTCCTCTTGATTAGCAGTCTTGCTGCAAGCTTTGCAGCAGAAATAGATCATCCAGAAGCATGAAGACAAACATTATCTCTTCTGTGTTAGTTTATTAGAACAGAGAACACAGGTCACAGATCATCCATGTTGTGCTGGACAAACATTCTGACATCCCAGGTGGACAAATGACCCGTGAAGCCATCCAATCCATTCTTTCTCTTCACCACTTACTCTCTGCTGTTTCCAATATAGAGCAAATTTAGCCATCCTGTTTCATTATTTACCATGCTACTTTTCCAAATCTGCCCAACCAAAGGCCCCACCCAGGACAAGCAAGCAAGGAGCTGAGCAGGGGAGTAGCAGTGAGTACTGTTTTGTTAACTTCCCAATCCCTACTCCCTCCTTCCTCTCTTGAATGTTAATCAAATCAGAGGGAAGTTCCTTTGTTTTCTCCTAGTTAGGATATTAGGGAAGAAGATTCTTTGGCCTAAATTAATTCTGCTTATTTGTAAAACAAATAAGAGCTCAGGTTGTTGGAAGGGAATATAACTTCCTGTGAATTCCCATAAAAATTCAAGTTTAAATGGCTCCTTAGAAGTTTTGCAAGAGAACAGACCATATATGCAGACAGACACCAATATACTAGAGGAACAGATCAACCTACACTAAAATTAAACTCACTCCCAGCTGTTAGGTGAAGGGGAACAGAATATGCTACCCCAAGGTCTGCCTCTTGGGCATAAGGCTTATCTAGAGCTGAGCATATTTAAGGAACAGCAGACACAGGAGAAGCTCTGAAAACATTTGGTAAGACACGTACATTTACATTCATAAAGAAAATATCCACTTGGTATGTCTCCCTCTCTATAATAGGAATGGGAGGATGACTAAATGTCTGTAAACTCTTATGTATGGACAAGGTACCAACTTAAAATTTGCATGACAACCTTAGCTTTGTTTATTGTGTTTTTCCTGATCACCTCCCCTAAGTGTCTCCCCCACCTTCAATATCTTTTGTCTTCAGATGGTATTTAAGGCAGTGACTTTAGCTATTATTTCAGGAAGTTACTTAGTTGTCCTGAGTATCTCACATGTATACATTGTACGAGAACAGAGTTTACCACCCCAGAATATGTCTCTGGCATATTCATTACTTTACGGAGAAGGCAATGGCAACCCACTCCAGTAATCTTGCTTGGAGAATCCCATGGATGGAGGAGCCTGGTAGGTTGCAGTCCATGGGGTCGCTAGGAGTCAGACAGGACTGAGCGACTTCCCTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTGGCACAGAGTCGGACATGACTGAAGCGACTTAGCAGCAGCAGCAGCAGCAAG TCONS_00245494 . 3' 13256 TCONS_00245494 . 3' 15072 EMBV3_31208 ATTCAAGGATTCTGAAGACTCTGTGGTTCCCTTCCAGCACCATCCCCACTCGGAAATCTG Gene GeneID:528332|LOC528332:XM_002683773:6_cdna Constitutive 0 NULL GeneID:528332 18 GENE LOC528332 NULL similar to cationic amino acid transporter 5 EMBV3_39172 TGTGTGACTTCACCGAGGATCAGACCGCAGAGATGAACGTGAAGGTACTGGACTTTGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06438 AATTCCGATTTTCCACATCCTCAACGCCCGCATCACCTTCGGGAACCTCAATGGCTGTGA Gene GeneID:616514|ANKRD13B:XM_002695676:198_cdna Constitutive 0 NULL GeneID:616514 19 GENE ANKRD13B NULL ankyrin repeat domain 13B EMBV3_03023 AATTGCTCACAAAGACCTGGATCGGGTGATGGACTACCACTTCACTACAGCTGAGGCCAG Gene GeneID:505005|BCKDK:NM_001045906:248_cdna Constitutive 0 NULL GeneID:505005 25 GENE BCKDK MGC127910 branched chain ketoacid dehydrogenase kinase EMBV3_13911 CCCAGGGGGAAAAAGAATTAGAGCGCACTTGGAAGGAAACGAATGTTAGTAGAGGACGGC Gene GeneID:509427|AP3M2:XM_002698708:118_cdna Constitutive 0 NULL GeneID:509427 27 GENE AP3M2 NULL adaptor-related protein complex 3, mu 2 subunit EMBV3_10430 CAGAGGCTCATCTGGTCTTTGCGCCTGTGAACAACTTCCTTCTAAACCCTTCATGTTCGC Gene BVT0102_147294 - 1 EMBV3_18844 GK000029.2:51335169-51367008 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42714 TTCAGGGAGCAGGCAGCCGCTGCAAAGGAGAAGTCACTGCCCAGTGCAAACCACCCTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31813 GGCTGGTGAAGGAAGTTTCATATTCTAGATTTTGTTTTGCTTTTTCTGACTTCAGTGGGG Gene GeneID:540568|ATP2A2:XM_002694492:359_cdna Constitutive 2 NULL GeneID:540568 17 GENE ATP2A2 NULL ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 EMBV3_14039 ACATCCAGCAAGTGCCAGAAATCTTACTGAGTCACGATTCCAGAATCCAGATTCTGCCTC Gene BVT0102_029119 + 0 NULL GK000015.2:13987896-14117303 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060557 TCONS_00060559 TCONS_00060560 1 XLOC_036770 NonCoding TCONS_00060560 XLOC_036770 NonCoding NonCoding - 15:14068430-14068991 - TSS45260 401 2 0.2875 0.00559835910551496 0.00182035923051272 0.00348106586393678 0.00277026940289814 0.00214847639848255 0.000142721651143209 0.000872574236424763 0.00315648493180451 0.000279588515514318 0 0 0 3.28721424829324e-05 0.000117306449409395 0.000293624215536088 0 0 0 0.0100361465976409 0.0168126596094994 0.00952353495906021 0 0 0 0.00234493624426287 0.00501574978393287 0.00609482429339564 0 0 0 XR_227799.1 LOC101905762 PREDICTED: Bos taurus uncharacterized LOC101905762 (LOC101905762), 3e-22 109 100.00 0.14713216957606 NM_024535.4 CORO7 Homo sapiens coronin 7 (CORO7), transcript variant 1, mRNA. 1e-07 60.8 83.33 0.14713216957606 0 noncoding 0 0 0 0 -0.783383656144047 0.0088614266844778 -0.138226502580509 0.143327381531757 GCTTTAGGAGTTGAGCCATCACAGGACCTTCTTGGTCAAGTTTGTGTTTTCCCTGGCAATTAAATTCCTTTAACATCCAGCAAGTGCCAGAAATCTTACTGAGTCACGATTCCAGAATCCAGATTCTGCCTCTGATGTTTCAGTCTCTTGGCAACAGCAGTTGCCTGTCCCTGAAGCGCTAGGTCACAGTTGAATACTTTTGTTTTTGCTGCTACCTGTGAAACAACAGCGTCGCCTCTCAGGTGCACGGCTCGCAGCCGGGACTCCCGCCGCCTCCGGCCCCACCCGCCGCCTGCCGCCCGTGGCCGAAAATCAACATTTTAAAGTTGAAATGTTTTGAATTTTGAAAAGCCTGTATTCTGATTAAAATTCTCAAAATACAAATTAGAATTTCTTTACAT TCONS_00060562 s 3' 49212 TCONS_00060562 s 3' 48823 EMBV3_01317 AAGGCAAAGAGATTGCAGCCAAGTTAAACATTCATCGAGTTCATGGGCAACTGAGGGGTC Gene GeneID:534295|LOC534295:XM_002694409:5_cdna Constitutive 0 NULL GeneID:534295 17 GENE LOC534295 NULL similar to Uncharacterized protein KIAA1109 (Fragile site-associated protein homolog) EMBV3_42058 CACAATTTTTAATTCGGTAGTTTGACTTCTGCCAGGGTAATCTTCAGTTGGCCCTGATTC Gene GeneID:524417|SLC41A2:XM_002687644:813_cdna Constitutive 0 NULL GeneID:524417 5 GENE SLC41A2 NULL solute carrier family 41, member 2 EMBV3_42278 GGCAACTATGTCATACAGAAATTTTTTGAGAGTGAAATGGTAAAGGAGCTCGATGGTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29921 AAGAGCAAACTTACTACCAGGGAAGACACTTAGGAGACCCGTTTGGTGAAGACTGGCAGC Gene GeneID:512696|SHC3:XM_002683679:2_cdna Constitutive 0 NULL GeneID:512696 8 GENE SHC3 NULL SHC (Src homology 2 domain containing) transforming protein 3 EMBV3_37919 TAAACTGGCCAAGGACCTTTGGGAGTGGGCTTCGGAAAGGGGCCAGTTAAACGGCCGGGG Gene GeneID:100300816|LOC100300816:XM_002698098:135_cdna Constitutive 0 NULL GeneID:100300816 25 GENE LOC100300816 NULL hypothetical protein LOC100300816 EMBV3_13827 CTGGCAATAAAATCAGGTACAACTCCAAGAGAGGACATTGGAGAAGAACCAAGCTGGGTC Gene GeneID:100297294|LOC100297294:XM_002690732:437_cdna Constitutive 0 NULL GeneID:100297294 10 GENE LOC100297294 NULL similar to ribosomal protein L39 EMBV3_00812 GCAATATGCACTCAATATGCAATATGCCGGCTCACGGCAGTAGGGGAATCTGGTCTCGAG Gene BVT0102_135846 - 1 EMBV3_15387 GK000030.2:30963072-30989739 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16427 ACTGTTCCAGGGAAAATGATCAACTCGCCGATGGGACACTGACGATCACATTCTGCCCTT Gene GeneID:539584|NFYA:NM_001014956:326_cdna Constitutive 1 NULL GeneID:539584 23 GENE NFYA CBF-B MGC139148 NF-YA nuclear transcription factor Y, alpha EMBV3_17686 CTGGTGCGACAGAAGGAAAAGGAGCTGGCAGACGTGAAGGCGGTGAATGAGCAGCTGACT Gene GeneID:514944|AZI1:XM_002696118:217_cdna Constitutive 0 NULL GeneID:514944 19 GENE AZI1 NULL 5-azacytidine induced 1 EMBV3_19720 AGTTCTAATTTTATTTACTACGTGTAATCATTTAAAGAATGGTTATTTTTATAATATCAA Gene GeneID:615152|LOC615152:XM_002692696:82_cdna Constitutive 2 NULL GeneID:615152 14 GENE LOC615152 NULL similar to chromosome 8 open reading frame 34 EMBV3_18764 AAAGTCACAGGGGCCCACCAAGCCCCCACCCCCGAGAAAGCCACTGCCTGCTGACCCTCA Gene GeneID:784605|ADAM15:XM_002685982:311_cdna Constitutive 0 NULL GeneID:784605 3 GENE ADAM15 NULL ADAM metallopeptidase domain 15 EMBV3_20690 CCCTGAGGACAAAGGTTATGTGCTTCACATGATTACTACGGCAGCAGAATGGTCTATGTC Gene GeneID:767922|DRAM2:NM_001076996:206_cdna UTR3_Alt 2 NULL GeneID:767922 3 GENE DRAM2 MGC128340 TMEM77 DNA-damage regulated autophagy modulator 2 EMBV3_39054 GGAGAACTGCTCTACCACATGGCTCATGGTCTACGGTTTTATGGTGATGGGATTAGCATC Gene BVT0102_107812 + 0 NULL GK000022.2:1877842-2112409 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41913 TGGAAGCTCTGTCAAGGGTAAGAATGTGGAAAGGGAACCAGTGACCCAACCATACGGTCC Gene BVT0102_189313 - 1 EMBV3_17973 GK000012.2:89009423-89056706 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23771 TCTCATCCACTTCTTCTTCAACCTGGCGGGTATCCTGCTGTGGTATGTGGTGCCCATCCT Gene GeneID:100299927|LOC100299927:XM_002691698:41_cdna Constitutive 0 NULL GeneID:100299927 11 GENE LOC100299927 NULL similar to solute carrier family 34 (sodium phosphate), member 3 EMBV3_25628 AAAGAGGGGCAAACATGGGCGGAGGAAGGGAGCGGGGATGGGAAAGCCTTACTTTGGGGT Gene GeneID:100294927|LOC100294927:XM_002697823:481_cdna Constitutive 0 NULL GeneID:100294927 24 GENE LOC100294927 NULL hypothetical protein LOC100294927 EMBV3_08187 CGTGACAGAGGGAATGGGAAGGTGGCCTTATGCTGTGCGAAATCCGTGCAAAAGAGAGAA Gene BVT0102_159108 + 0 NULL GK000003.2:1-121430405 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183059 TCONS_00107066 TCONS_00107070 2 XLOC_111065 XLOC_062979 NonCoding TCONS_00107066 XLOC_062979 NonCoding NonCoding LOC786771 2:136711762-136940996 o TSS78688 747 1 TCONS_00107066_3 112 2 0.996750031627209 0.000244858930473881 0.000100887221058775 5.79920357525288e-09 0.00103541292132117 0.00227537395762402 6.3486870205991e-09 5.09088208101086e-09 0.000577617952538637 0.00178693868771328 0.000244630320923372 0.00022436977588454 5.68286505583938e-10 2.12470858708803e-09 0.0073831851735047 0.000788417799782349 0 0 1.67926264766734e-05 0 1.76490746101309e-05 0 0.000671790020845636 6.13965832555635e-06 0.000237944411458437 5.73680352743805e-05 4.8108802688662e-10 1.25485256341994e-11 0.000102545978138693 1.04001592877864e-05 2.50659917351584e-10 XM_005200400.1 LOC101908506 PREDICTED: Bos taurus ubiquitin carboxyl-terminal hydrolase 17-like protein 22-like (LOC101908506), mRNA. 0.0 1326 99.47 0.998661311914324 0 noncoding 0 0 0 0 0.0325370906486804 0.768901115935124 -0.0747392039785758 0.197327309580397 CCGCACTGAGGAACGACCCGAGCCTACCCTAGATTGTGATAGCAAGACAACTGGACTTCCGACTCTGCCCGTCCTGTCTGGCAGTCTCATCCAGCTGGGCCCCGGGCAAACGCCTCTGGACGCGAGGAGATGCGGCCGGCCTCCAAAGTGCCTGGGGCGGTGGGGAAGCTGTCCTCCCCTAGCTGCTTTCGCGACTGCCTCATGGGCCCGTGACCCGCTGGAGGGGCATAGAGGCCCTTATCGACCACCTCTTGCGTTTTTCTTTCTTTGGCTTGGCTGATGGCTTCAAACCCCAAACCCTCCATCAAACGGCAGACCGGGAATTTGCGATGTAACATCTCCGACCTCGAGGGCCAACGCTGGCTCCTGACTGCGCGAGTCGGCGTGGCAAGGAACAGAGAGCGTTCCGATGGCTTGTTTCCCCCGCATGGCTACCTACGCCGCACCATGCCCTCCGCACGTAGAGAGGACAAAGAATGATGAGCAGTATCTTCCCCCGAGAACACGAACAAGCGTGCCCTGCACGAGGAAGCGGAGCCACCCACGGTCCGCCCTCATCATCACCACGCATCTTCCTCCGCCCCATCGTCTCAAATGGACTTACTGCTTGCCCCATCCACACCCTCTGAAGAAGGAGGAGGAGGAGGAAGAGGAGGAGAAGAAGAAGAATGTCGATTGGGGTGGCGTGACAGAGGGAATGGGAAGGTGGCCTTATGCTGGGCGAAATCCGTGCAAAAGAGAGAAAAA TCONS_00107067 s 3' 47497 TCONS_00107067 s 3' 47497 EMBV3_27238 TCTCCTTGTTCATTAGCATTGGGAATGCCCTGCTCCACACTCTGATGGTGCTGCCACTAT Gene GeneID:512624|LOC512624:XM_002688792:185_cdna Constitutive 0 NULL GeneID:512624 7 GENE LOC512624 NULL similar to olfactory receptor, family 7, subfamily G, member 2 EMBV3_23557 CAACAGGGTGACCGGCAAATGCCTGAAGTTTCCCTTCTTCCAATATTCAGTAGCCAAGGC Gene GeneID:539571|ESM1:NM_001098101:1_cdna UTR3_Alt 2 NULL GeneID:539571 20 GENE ESM1 NULL endothelial cell-specific molecule 1 EMBV3_35786 GGTGGATTTCATGCCCTGTGGCGTTTACAGTGTATATAATGGTTGTGTTTTCCTAGGGCT Gene GeneID:539922|FBXO34:NM_001081611:104_cdna Constitutive 1 NULL GeneID:539922 10 GENE FBXO34 NULL F-box protein 34 EMBV3_38912 TGGTAAAGAATCTGCCTGCGATGCAAGTGATGCTGGTTTGATCCCTGCAGAGGGGAAGAT Gene BVT0101_046935 - 1 EMBV3_22525 GK000008.2:10632192-10662267 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11506 TCCACCCCGCCTCTGATTAGTCCAGATGTGCTATGAAGTGCCTCGATTATTTAGGAGAAC Gene GeneID:535126|PGS1:NM_001046395:431_cdna Constitutive 2 NULL GeneID:535126 19 GENE PGS1 MGC129082 phosphatidylglycerophosphate synthase 1 EMBV3_32766 GAGTAGCCGCAAGGTGCTTTCCTGGTGCGGTTTGTCTCTTTCTGTCCTTGAACTACAACA Gene BVV0102_361330 + 0 NULL GK000010.2:13123710-13162026 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18993 CCCCAAACCCTGTCAATCCCAGCACTAACGCTATAGGCATGAAAGACGATCCATGTGCTG Gene GeneID:541279|CDKL3:XM_002689188:26_cdna Constitutive 0 NULL GeneID:541279 7 GENE CDKL3 NULL cyclin-dependent kinase-like 3 EMBV3_29243 CCAGGTCCTAGCATTATCTCGGCAAGGACAGATCCCTGTGCTATAAGAAAGCTTGAATCG Gene GeneID:539218|CALU:NM_001034665:9_cdna Constitutive 0 NULL GeneID:539218 4 GENE CALU MGC127656 calumenin EMBV3_41057 GTGTCATTTGCCAGAAATGGCTCCAGGGAGATTTTATTTACAAGAGAGTGACTGGCCCTG Gene BVV0102_396111 + 1 EMBV3_41889 GK000004.2:76606256-76705104 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12349 GAACATCCTCACGCTGCACCAGGTGGTCTTGAAGAAGACACCCGTTATCAGAGAAAAAAG Variant GeneID:616277|RAGE:XM_002696774:463_cdna 258^328 2 EMBV3_12974 GeneID:616277 21 GENE RAGE NULL renal tumor antigen EMBV3_16787 GTCAAGAGATTGTTACCTGTTTGATCCCTGGCTAATGATTTTGTAGTGTTAAAGTCATAG Gene GeneID:614588|DNAJB9:XM_002686812:13_cdna Constitutive 0 NULL GeneID:614588 4 GENE DNAJB9 NULL DnaJ (Hsp40) homolog, subfamily B, member 9 EMBV3_29156 ACAGCCGGCGAGGACGCCGACGGCAGCAGGAGCCAAGCCCTCGGAGCCTGCCTAGTGCGA Variant GeneID:511413|ZFYVE21:NM_001079587:217_cdna 558^717 1 EMBV3_13542 GeneID:511413 21 GENE ZFYVE21 NULL zinc finger, FYVE domain containing 21 EMBV3_43522 TTCCTCCGATTTTTGGAAAGAGCTACGGTTGGCGCTGCCGAGGAAGGTGCAGTACAGATC Gene GeneID:531801|SIGIRR:NM_001082443:4_cdna Constitutive 0 NULL GeneID:531801 29 GENE SIGIRR MGC140394 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain EMBV3_38956 TCAAGTGACACTGAACTTCTGGGAGGAGAACCCTGACCCCAGCCACACCTCACAGAGTCT Gene GeneID:509855|IRF9:NM_001024506:107_cdna Constitutive 0 NULL GeneID:509855 10 GENE IRF9 ISGF3G MGC126912 interferon regulatory factor 9 EMBV3_02146 AACACCCCCTACTTGCCCAACCTGACTTCACCCCTGCCCTTCTTGTCCACTGTGTTTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25203 TCAGCTAGACCTACAGAACTGCAACCAAGCCTGCCTGTCCACAAAAGGAGAAAACTGACC Gene GeneID:100336509|LOC100336509:XM_002691901:10_cdna Constitutive 0 NULL GeneID:100336509 12 GENE LOC100336509 NULL hypothetical protein LOC100336509 EMBV3_28751 CCACACTTTGAGGAAGTTTAGTGATGTTTCAAGGTTTCTCGGCTGCTAGGAGGTTGAGCC Gene BVT0102_006673 + 0 NULL GK000023.2:15226685-15391989 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136340 1 XLOC_082555 NonCoding TCONS_00136340 XLOC_082555 NonCoding NonCoding - 23:15382478-15387378 - TSS101630 4900 5 TCONS_00136340_6 105 0.232857142857143 1 0 5.55335516669299e-06 0 7.55428385717108e-06 2.82453640263921e-07 0 0 1.90423067859209e-05 4.70763407276546e-05 1.28818468441648e-05 3.77861282489655e-05 8.87644632214964e-05 4.37840785070915e-06 2.34227194009136e-06 0.000142560110579827 5.40682932764243e-05 0.000441989695093136 3.38823265334398e-06 0.000189461682934137 0 1.46763999055678e-05 3.0976849696292e-06 1.5144214376623e-06 9.54849514421104e-05 7.52697900174968e-05 0 0 1.19574511157871e-06 3.33240799015439e-05 8.81757445378801e-05 6.13494251674396e-05 XM_005193170.1 ODZ4 PREDICTED: Bos taurus odz, odd Oz/ten-m homolog 4 (Drosophila) (ODZ4), transcript variant X1, mRNA. 1e-64 253 86.10 0.0448979591836735 0 noncoding 0 0 0 0 0.05710450923133 0.7098500569948 0.0171968711917353 0.74734259217126 GTCGCAAAGAGTCGGACACTTCACTTTCACTTAAGTATTCTAGGAAGAGCTAGGCAGGACGGGTGTCCGAGAGGCTTTGCAAGGTCTGTACAAGCTCAGAAAAGACCTTTAAGGACACCCTGACCCACATCTAATTCTCGCACAGCTGCTTAAGAACTGATGGTGGTAGATGAATTTCCCCCCCTTCTTTCTACCACGGAGGGAATTTTAGGGTCTTACGTCTTGAGGGGTCTGTTCTAAGCTGAAGTTAGCCCATCCGTTCCCAGGTGAACCCCTCTATGAAAGTCATCACCCTCTTACCTGCCATCCCCAACAGAAACTTAATGTACTTTTTGGTGGGGGAGAGGATGCTTTCTTCCAAGAATGGAACCACAGGTGGGGACTAGAGAAGCATTGGGCTGCAGTAACCTTTCCGGAAGTCATCCTGGAACAGGGAGAAAGATGTGGAAGGATCCTGTATCTTGCACATTTGAATATGGATGTGTTTTTTGGATGCCTCTGAGTTGGTACCCAAGATTTCTGTAAATGCCACTGCTAGATATCATCAGGGGAGACAAAGAGAGGGACCAGGGCCCAGAGAAGGCCAGACCACTGGTCTGTCCCAGGCTGGCAGGAGCCCTTCCTGTGCCCACGGGAGCCCCCTGGTGCCAAGGGCACTACCAGAACCAGGCTCCAGATGGCCTCTCAGGCCCTGGGTGAGTACCCCACCCCTTAACCAGCAGGCCCCCCACGAAAGACGGCACTATTTAATTAGCCATCTCTGATTAACCAAACTTGGCATTCGGCTCCTCTTGCCCTCATCTTTCCCAGCTCCGAATCAATGGCTTTGATATGCTAATTAGGGAGTAATTTAATTTCAAAAGGCCGCAATTAACAAGGGTGTTGTGGACATGCTGTAGTTAAGCGGAGTAATCTAATTTGCATTAGTAACAAGCAGGGACTAATTAGAAGCTTAATTAGACACTTAGATGGCTCTTATGTTTACTTTCTTAACGAGATGGAGTGGGCTCTTTGGTTCTCTTTTTTTCTTTTTCTCATTGTTAATTCTTTCTTTTGGTCACGGTACTCGAAAGAAGTGTTGAGGGAGGCCACCTTGCTAGGGCCTGGTGGAAGCATTTTGGGGCAGGAGCCAGTGAAAAGTGTGCTGGGGCAGGGGCATGGTGATGGTGGCGAGGCAAGGTTCGGATTCCTGGGAAATTCCAGTGACCGCCCTCCAGGCTTTGCCACCTTGAGATGGAATCCCAGGGAAGAGCTCTGGTTTGGGAGCTGTAGGGTTTCAGTTTGGCTCAACCTCCTAGCAGCCGAGAAACCTTGAAACATCACTAAACTTCCTCAAAGTGTGGTTCCTTCAAACGTCACAGTGAGTGCCTGTGTGTGACAGGACATGGGAAAGAACTTTCAAGGCCTCTGTGAGTGGAATAGTTGTTACTAAAATATATTCACAAATTGTGTGCCCAGGCTTCACTTACTGAAGACTCAGCTCAGAAGTCACCTCCTACAGGAAACCTTCCCGGAGCATCTTACTCCCTCGAGGCATCCATAGCCAGCCCCCTTCTCCAGTATCTCCTGAACGTAACACTGGTAAAGTTGTGTGTTGTGTAGTCAGTTTTCAACCCTGGCTGTACCGGAAATTTAGAATGCTGTTAAAATTCTCCATGCCTAGATCTGACTTCCCAGAGAATCCAATTAAATTGATCCGGGGTAGAGCCCAGGTGGGGGCTTCCCAGGTGGCACCAGTGGTAAAGAACCCGCCTGCCAATACAGGAGATATAAGAGACAGGAGTTCAATCCCTGGGTCAGGAAGATTCCTTGGAGGAAGGCATGGCAATCCACTGCAGTATTCTTTGCCTGGAGAATCCCATGGACAGTAGAGCCTGGTGGGCTACAGTCCATAGGGTTGCAAAGAGTTGGACATGACTGAAGCTACTTAGCACACAGAGCATATATATGGATATTTTTTAATGCTTGTGTTTGCCTGTGTCTGTCTCTCTCCACCAAGCTATAACCGCCCTCCCGCCCAGCAAGGGCTGTGTTTTATTCACTTCTGTGTGCCCAAATGCCACTACCCTCTGTGGCCAGCGTCATTCACACAACTCTGTGACAACTAAAAAGTGCTGATTAAAATATTTGATGTCATGTGGAAATGGTTATGATAGTAAGTGGTGAGTGGGAAAACAAAAATTCAAACCATGTACAGATTATGAACCCAAGCTCACGTTTTAGAAGTTTATATGCAAAAAAAAAAAAAAAAAGTTTATATGCCCAACGAGAAAGAAAATGGACGAGACTGAAAGGGGTGGGGCCCCAAAGTCTAGCTCTCCAGCTGGTAGACTTACAGGTACTATTCATTTATTTCCTCTTCACATGCTTCTGCCAAGATGTCCTACTTTTATGATTAGAAGATAAAGTTATTTGAAACTTGGAGGAGAACCTAGAACAGAGAACCCCGGGATGGCGGCTCACCTTCCAAATCAGAGGCGGCTACAGACTTCTAAGAGGCACGTCCTTAGCCTGGCACGTCCTTAGCCTGGCATGTGCACTAGCTCCTTGGGCTTGGAGGTTTTGTGCTAAGAAGAGGCCTCGAATGATCCCCGAACTTGGACACCAGATAGTTCCCAGTGTGCCGTTCAGGGAGATTCTTAGGCTGAAGCGAGAATCTTAGCAGGGAGCCCAGGGCACCAGACTCTGACCCACACAAGAGCGTCCCACAGTCCAGGGAGGGCCCTGGAGAGGGACTGAGCTTTTTTTCTGGAGCTCTGATGGCCCCCTCAGCCTGAGGAGAGACACTGCCCAGGCTGATCAGAGTGCCAAGCGGTCATGGGGCTCGCATCACCCTACCTTGCTTTGGGGAGCCTATTGGGAGCTACAGAGACATTCTAACCCTTGGGTTCTATCTCACTTTCCTCAAGTGCTGAAGAGAGTGAAAATGGACGAGCCTGGAATGGGTGGGGCCCCAGCGTCAGGGCCGGGATGAGGGGATGGCATCTGGTCTTGCTGGGTCCCCACAACGGTAGTAAGTAGCCTTCTCTGCATACCTTCAGGCAGCGATACCGCGGCAGCCCTGTGAGGAAGGGTTACTGTATTAGCTTCACATGACAAATAAAGAAACCAAGGCTCAGATGGTGACCTCACTGCTCATGTTCTAATTACAGAGCTAATAAGAGACCAGAGCAGGGTCAGCAGGTAGGAGGTCCAATGAGGGGCTGGGAGGAAAGGCCGAGGCCCCCAGGGCTCCTGCAGGAGCCCTCCTCTCACCTGGTGGCCCGAAGCCAGTGGGCCTTCGGGGCCTGAGCTGGATGGGCAAGGGGATCCCCAGGCCTTGGGATGACAGATTGGGAAGTTTCCTTCAGGTGCTTGAAATGCCAGCGCTCGTTGTGAAGAGCCCTCTGCTTTACATCCCTTGACACAAGTGGGATCTGATAGCAGGACAGCTAGAGGAGGAGGAGGAAAAAGAGAAGGGAGGAAATAAAAGGCAGCCCCATGCTCTGTTCCATATGGTACCTGCTTATGTGTGGCTTTTTTTTCCTCTAAATTGCACCTTATGAGAACCTATCTTTGAAAGTCCCCCCACCGCCATGTGGACTATTTATAAAGTCTTTTATTGAATTTATTAGAACATTGTTTCTGTTTTATGTTCTGATTTTTTGGCCATGAGGCATGTGGGATCTTAGTTCCCCAACCAAGGATTGAACCTGCTTTCCCTGTTTTGGAAGGTGAAGTCTGAACCACTGGACTGCCAGGGATGTCCCATGTCTTTTTATATAATCCAGAATTGCATCCATTTCAAAGACTCTTTGCTCTGAAGGAAGTCTTCAGAAACCAGTGACTGCTCTTGTGAAGTCAGGCCTTTTGCAGATTGCTGTTCCCCCTACATTCAGTGTACACTTTGCCTGACCGATACCTGCTTATTCTTCATTTCTAAGTATAGATGCCAGTTCTTAAAAAGAAGCCTTCTTTGCTCCTCCATATAAATTGAGTCTTTTATTTGTTCCTTATACTCATATTTATAGAATTTGTTTTATTTGAGCTTATCTACATGTGTCCTTATTTATCGTCTGCCTCACCTTGTGGGGACATAGCTCCCGGAGTACAAGGCCTACTCAGGTCTGCACAAACACAGGCTGGCACGTGGGTAGGTGCTTAAATATTTGTTGAACCAATGAATGGATGAAGGGTCGTTGCTGGTGAAATATTCTCCTGGGCAGCATCAGAAAGAGAAGAATGACTTTGTGGCCAAAACTTCACAATACTGGCTAAACTTTCAAAAAGACAAATGCCAAATTTACCCAGGAAAAAAGGGAGGTGAAGTTGTACCTCCATTATTACCAGTTGCCCTCAAAACACCCAGGACACCTACGCTGGCTTGTTTGAATTTTGTAAGCCAGTTGGGGGCCAGGACCGAGTTTTAGTATCCTGTAGATAGGGCCTCACTCAGTGCTTGGCTTAACTGGCCACGTTGAATGAACAAACGGTCTTGGAGGTAGATCACCTTGTTTTGGCCACCAGGAAGCTCATAACTGAAGCCAGTGCTTGTTGCTGGAGCCCTGCTGTTGCCTTGGACAGGCCGAATCTGCATCACCTAGGAACTTTTAAGAAATGAATTCTCAGGGCATTCCAGGCCTAAAATCAGAAGCTCCAGGCTGGGGGCCCAGTAATCTGTATTTTAACAAGCCCCCCAAGGCGATTCTGATGCACCGAAGTTTGAGATCCTCTGGCTTAAGGTCTTGGCCCATTTATTCTCCCTTGTACTACCCCATGGTATTATATTTTAAGTAGCTTTGTCTGTCTTTTATTGCAGTCGGCTTCCCAGTCTTTCTTGGAAGTTGATAGCGTTATATACATTGTAAACAGATAGCTATATCTAGTCCAATTTCCCCCATCATCCTACGGAGAAGAAAAG TCONS_00132462 TCONS_00132463 TCONS_00132464 TCONS_00132465 . 5' 4596 TCONS_00132462 TCONS_00132463 TCONS_00132464 TCONS_00132465 . 5' 4596 EMBV3_11426 TGCTATCAGGCCACGCTCCGGTTGGGACAGAGGCGCGGGTGAATTTGTCTCTTTCAAATA Gene BVV0102_204523 + 0 NULL GK000025.2:42728357-42806962 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145728 1 XLOC_088914 NonCoding TCONS_00145728 XLOC_088914 NonCoding NonCoding LOC100848659 25:42757539-42758705 = TSS109143 971 1 TCONS_00145728_1 60 2 0.168240343347639 6.10037451927572e-10 0 5.30867293385222e-10 0 0 0 0 0 1.62515626073632e-05 0.000114409169946297 1.6502894847293e-05 0.000220948496219625 5.31896339175381e-05 7.19837039889938e-05 0.000422155601975824 0.00304644280064478 0.00167561822121882 0.00372099833247191 0 0 0 0.000168130590431472 0.000595227260827831 0.000932328625335166 0 0 9.54738937621445e-12 0.000464926367258336 0.000464962075051554 0.000235288415203808 0 noncoding 0 0 0 0 0.0473557969308991 0.733519413111311 0.0505834752768161 0.310374446875919 TGGCGCATCGCCAGTCTCGGCTGACAGGAGAGGTGACTGGGTCGAGTAGGAGGGGTTGCGGCGGACACTCTGGGGAGAAGGCCCAAGATGATGGTCAGGAGAGCTGAGGGGCGGGCGCTGTGCCGGCTGGAAACCCAGGGTCGTTTGTGGTCTGCAGCCGCTGCCAGCCAGGAGCCTCCGCTGGGAGCCGGCCCTGCCGTTCACGCGGAGCAGCTCGGGCGCGGCCTGCCTCCGGTGCGCTCTGTCCTCCCAGGCCGCGAGCGACGCTGACGCCATCGGAAGGCGACCGGAAGCGCCGCCGCTGACGCCATCGGAAGGCGACCGGAAGCGCCGGCGCCGCGTGGCCCTGTGCCCGGTCCCCGAACCCTCTCCGCGCGCTCTCTCCGTATCCCGTCCTTGGTTCCCTTCTCTGATTGCAAAGTGGGTCTCTTTGACCTGTTTCTGAGCCCCATGGGGAAGGATAAGAAGCGGAGTAGCCGGCGAGGGAGCAAGGAGTGAAGGAAGGGCCTCCTTGCAGACTGTCTGCTATCAGGCCACGCTCCGGTTGGGACAGAGGCGCGGGTGAATTTGTCTCTTTCAAATAGACAAGTGTTTTACGCTTTCACATTTACATTTAGTGTATCTTCCCCACTGTTGAGTGACCTCCCTGGCCAGCAAGGAGATCACCCAGGATGACCCACCTCCCGGGGGCTCGGCCCTAGGTGTCCTGTCGGAGAGCTGGGGTCCTGGAAAGAGGGTTTGGAGAGGGTGTGTGCCTGGCTTCTGCCCTCTTTTCTCGCAGCCCCTCCTAGCTAAGGTCTTCCGTCTCAGACAGTACTGTGTAGATTTAGCCTCTCCGACTTCTTCCAGTTCTCTAGGCACCCGTGACCTCGTGCACCCAGAGGAAGGTGCATGGGCCATGGGACAGTGAGTGGGAGGAGTGGATAAGACTGGGCATTTGTGCAAAATAAACGTTGACATCTTAAGCCGCG EMBV3_17577 CAGGTTCTCGATGGTGGCAAATGGCGCTTGTCGGGTAAAGTGAAGATGACCCTGGAGATA Gene GeneID:526655|FER1L5:XM_002691163:219_cdna Constitutive 0 NULL GeneID:526655 11 GENE FER1L5 NULL fer-1-like 5 (C. elegans) EMBV3_21297 TTGCAAAGCGAGTCTGAAAAGTGCTTCTCCCTCCAACCCAGTGACTCCCCTCTGGGGTAT Gene BVV0102_013329 - 1 EMBV3_32109 GK000021.2:58098929-58163027 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15150 ACAAAGTGCAGAGCGCATGGAGGTGCGCTGGTTCAGAGGGGACAATTCCAAACTTGTTCA Gene GeneID:100295301|LOC100295301:XM_002686497:605_cdna Constitutive 0 NULL GeneID:100295301 3 GENE LOC100295301 NULL similar to butyrophilin-like 2 EMBV3_43576 CTTCCTCTCGGGCTTCATCTCTTGTGTGGGGAGCTTCATCCTAGCGGTTTGTCTGAGAAT Gene GeneID:614538|DAD1:NM_001034761:269_cdna Constitutive 1 NULL GeneID:614538 10 GENE DAD1 MGC127140 defender against cell death 1 EMBV3_37878 GTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGT Gene BVT0102_015792 + 1 EMBV3_23415 GK000015.2:80115034-80162249 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00117923 TCONS_00118040 TCONS_00210913 TCONS_00226167 TCONS_00219592 TCONS_00040258 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00174808 TCONS_00174809 TCONS_00132066 TCONS_00174807 TCONS_00232829 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00078426 TCONS_00207934 TCONS_00174805 TCONS_00171428 TCONS_00080712 TCONS_00206300 TCONS_00175564 TCONS_00207933 TCONS_00242416 TCONS_00205125 TCONS_00174806 TCONS_00056149 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00242415 TCONS_00001866 TCONS_00110426 TCONS_00206299 TCONS_00246741 TCONS_00001865 32 XLOC_105290 XLOC_072089 XLOC_072206 XLOC_129423 XLOC_137940 XLOC_132911 XLOC_024074 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_104695 XLOC_080699 XLOC_142312 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_047314 XLOC_126448 XLOC_103815 XLOC_049596 XLOC_124877 XLOC_105345 XLOC_149080 XLOC_124587 XLOC_033952 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_149079 XLOC_066330 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_07881 TATTTTATGGTCCAGCCATTAGCATGTACCTTCAGCCCCCCTCTTCCATCTCAAGAGGCC Gene GeneID:528343|LOC528343:XM_002697440:28_cdna Constitutive 0 NULL GeneID:528343 23 GENE LOC528343 NULL similar to olfactory receptor 134 EMBV3_20478 AGCCGCTTGACTGTCGCCCCTCACCCTGACCTGTTCTTGGCACCTAAAAATATTCGGTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39881 AACTGAGAACTTAATCTTCCAAAATGTCAACAAATGCCCAGCACACCAGGGTTTGTGGGA Variant GeneID:540910|SMARCE1:NM_001099116:204_cdna 98^141 3 EMBV3_30187 GeneID:540910 19 GENE SMARCE1 MGC152620 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 EMBV3_09045 AGCTGCTGTTCTGCATCTCGGATTGGACTGCAGAGTAGTAAGTGTGAGAACTGTGGCACT Gene GeneID:613684|AKNAD1:XM_002686192:414_cdna Constitutive 0 NULL GeneID:613684 3 GENE AKNAD1 NULL AKNA domain containing 1 EMBV3_12769 GTAAGCGTGTAAATCACTGATGGCATGCGGTGAGGATGTGCTCTCACACTTGTTACCATG Gene GeneID:540085|GAB1:NM_001101201:50_cdna Constitutive 2 NULL GeneID:540085 17 GENE GAB1 NULL GRB2-associated binding protein 1 EMBV3_19208 AAGCTATCTAACACAGAACCTGTAACAGAGGTGATTGAAGCCTCAGATGTTGTGCTAGAG Variant GeneID:506152|GNL3:XM_002697016:427_cdna 412^492 1 EMBV3_40435 GeneID:506152 22 GENE GNL3 NULL guanine nucleotide binding protein-like 3 (nucleolar) EMBV3_21323 GGAAATGCAGCCAGCCCCAGCCACTACTTACATTCCCAGATAACCAAGAAGGAGATAGAT Gene GeneID:539603|SASH1:XM_002690315:7_cdna UTR3_Alt 2 NULL GeneID:539603 9 GENE SASH1 NULL SAM and SH3 domain containing 1 EMBV3_25130 TCCCCGGTGGTCAGCGTGACATGGTTTCCAGAAGATAGCACACGTTCCTCCATAGAAAGT Gene GeneID:512626|CNDP2:NM_001035108:14_cdna Constitutive 0 NULL GeneID:512626 24 GENE CNDP2 MGC127325 CNDP dipeptidase 2 (metallopeptidase M20 family) EMBV3_09915 GTGAAGGAAGTCAGTCATCACAGTTGAATCTGTAGCAAGTAGAAGCAGCAGTGGGGTCGC Gene BVV0102_230110 + 0 NULL GK000013.2:258541-297694 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245187 TCONS_00245186 TCONS_00041725 TCONS_00245185 2 XLOC_150649 XLOC_025528 NonCoding TCONS_00245186 XLOC_150649 NonCoding NonCoding LOC100296348 X:94921139-95141557 o TSS184099 185 2 0.999169755508876 0.000134678062422976 0.000149262186536089 0.000558504258836278 0.0012799613848571 0.00582004992125632 3.33364713917371e-13 0.000346700286267565 0.000352705830144996 4.26047983129622e-05 0 1.64892294974494e-05 0 0 0 0 5.07202132879993e-15 0 0 0.0016167931707714 2.26737389042236e-05 0.00181761596614201 4.00730063977529e-05 0.00160521675761094 3.01402087656647e-05 0.000346385422209115 0.00072669060780303 0.000734224733283553 0 0 0 XR_232470.1 LOC101909256 PREDICTED: Bos taurus uncharacterized LOC101909256 (LOC101909256), 2e-89 331 100.00 0.983783783783784 0 noncoding 1 1 1 1 -0.0449554278544361 0.696500197781855 -0.0040232666109352 0.955736921839573 AGGTGTCTCCACCAGGTGCCATCAACCCATGGAAGAAACTGCCAGTTCCTGTGATGGCCAGTGGAGGGAGCGACCCCACTGCTGCTTCTACTTGCTACAGATTCAACTGTGATGACTGACTTCCTTCACTACAACTCCTCTGAGCAGAACACACCTAAATATGAAATGAACACGTGGCAGTCATC TCONS_00247700 r 5' 19596 TCONS_00247697 r 3' 25610 EMBV3_05316 GGTGATGCTTGACTGTGCTCCTTGGCACAGAAACTCACTTGAACTCTCACTTTGACTATC Gene GeneID:535511|SH3D19:XM_002694316:43_cdna Constitutive 0 NULL GeneID:535511 17 GENE SH3D19 NULL SH3 domain containing 19 EMBV3_28269 CATTTTGGAGACCGAACTGAGGACTGAGGAGAAAGTCGTGGCTGAGATGGAAGAACACCA Gene GeneID:540374|GMEB1:NM_001046475:251_cdna Constitutive 0 NULL GeneID:540374 2 GENE GMEB1 MGC137949 glucocorticoid modulatory element binding protein 1 EMBV3_25115 GTTCTAGTTCCGAGGACCAAAACGACACCTGGCTGGTCTGGACAAGATGTCTAAGGGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40754 CCCGAGAACACGCTGGCGGCCATTCGGCAGGCTACTGATGCTCTAAAAAAAGTATATATG Variant GeneID:539978|GDE1:NM_001034686:4_cdna 333^614 2 EMBV3_01556 GeneID:539978 25 GENE GDE1 MGC127215 MIR16 glycerophosphodiester phosphodiesterase 1 EMBV3_42756 TGACCTGATGGGCTCTGTCTGAATCTCCCTGGTTCACAGATGGGGCAAGTCCAGCCAAGA Gene BVV0102_305233 + 0 NULL GK000027.2:5427299-5457174 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00154848 1 XLOC_094558 NonCoding TCONS_00154848 XLOC_094558 NonCoding NonCoding LOC100847518 27:4839080-4840902 = TSS115985 977 2 TCONS_00154848_2 102 0.119754350051177 3 0.465129049972543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.75759462187822e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XR_229995.1 LOC101909454 PREDICTED: Bos taurus uncharacterized LOC101909454 (LOC101909454), 0.0 1061 98.70 0.625383828045036 NM_001204265.1 NR3C1 Homo sapiens nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) (NR3C1), transcript variant 8, mRNA. 4e-06 57.2 84.31 0.0511770726714432 0 noncoding CCGGCTGGCAGCCCGCGTCAGGCCTGTAGCTGAGCTGCGCTCTCCACATGGTGCCCCGGACTTCACCCTCGTCCCTCACAAAAGCCGGGCTGTTGCCTTTCCTCCAACCTTTGGAATTTTCTTCCGGCCCAAGGTTGACTAATACTAGTCTTTCTAGTTTCTGGCTGGTGTTGCTTTTTTTAAATCAAAATATCTCTCAAATCTTTTTATAATCTATGAGCTTCTTCTGCCACTTAAACTTTTTTTTGGGGGGGTCAAGACAAATTTTTTGGAGCAGTTTTAATGGCACAGCAAAATTTAGGGGAAGGGACAGAGTTCGTCGTATTCAAACATTTCTCCTTTCACTCACTGACTCAGCAGCAGGGCTCCAGGCTCCTGCTTTCTCTGTGGAGCCGCCGGGCCTGGCACTGCAGCCGGGACAACCTCTTGGCTGGACTTGCCCCATCTGTGAACCAGGGAGATTCAGACAGAGCCCGTCAGCTCACGGGCCCCGGGCCAGCCCACGTGCCCTGCGTGACTACTGAGCATGGAGCGCTCTGCAGCAGAGATGGACTCGACTGCATTTCAACGATATTTATGACATAACCACCATGTGCTGAGCGCCGCAGGAGGGAAGAAGGCACCCTGCTCCTGGGGGCTGGCGGCTCCTGTGGGTGAGCCTCTCTCTTGTTTGCCAGCCACCTCTGAGAAGTCCTCCCTGACCTCCCCTCGTCCTAAAAGTGGCTGGTACTTCTGGGCTGCCCTTTTACAGCCTCCTTCCTGTTGCGTTCTTGGCATGCTGGCTGCTTCCCCCGACATCAGTGGGGTCTGAGGGAGGGGCCGCATGGAGACCCCCATCATCTCCCCTCCCAGGAGAGTCTGCTGTCGGTATAGATGACCAGTCGCTGGAGGAAATGAATGAAATGAGTGCTGCCATGGACTGAATGGTGTCCCCCAGTTGCCCATGTTGAAGCCCTGTGTTTGGAGGTGGGGCCTTT EMBV3_19465 TCGATCCTTGTTGAAAATGGCTACAACTCTATCTTGAATAATCCTGCGCTGGGCCTCGAG Gene BVV0102_420724 - 1 EMBV3_28382 GK000003.2:28768516-28823024 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169308 TCONS_00169311 TCONS_00169314 TCONS_00169309 TCONS_00169310 TCONS_00169313 1 XLOC_103333 Coding TCONS_00169308 XLOC_103333 Coding Coding DENND2C 3:28771136-28837824 j TSS126803 1926 1 TCONS_00169308_5 464 0.0358255451713396 7 0.971223776748092 0.000230625050472084 0.00051792683013247 0.000370618485463787 0.000150155426232027 8.14545857301023e-05 0.000156631648007479 7.37193947082146e-47 0.000819670304324761 0.000462936845911576 0.000792338369452283 1.92974207189402e-08 2.45558589519293e-05 0.00141443340441863 0.00306192999470295 0.00154379926630569 0.00074643947223549 0 0.000584859231034901 0.000376484989744935 8.67290926274605e-46 8.26561643019356e-86 9.14052961163128e-12 2.78920603825727e-05 0.000420539515647382 0.000407385723194628 0.00018756832597487 1.77799410778213e-53 0.00040432277305937 3.26700556166282e-05 1.36227884339721e-05 XM_005204032.1 DENND2C PREDICTED: Bos taurus DENN/MADD domain containing 2C (DENND2C), 0.0 2985 100.00 0.85877466251298 XM_005270547.1 DENND2C PREDICTED: Homo sapiens DENN/MADD domain containing 2C (DENND2C), 0.0 2051 88.83 0.820353063343718 TCONS_00169308_5 sp|Q68D51|DEN2C_HUMAN DEN2C_HUMAN DENN domain-containing protein 2C; 0.0 815 87.09 0.980603448275862 0 noncoding 0 0 0 0 0.00240257593083609 0.985587842309208 0.0585333357417122 0.313067408680315 GCAGACCTGGCGCCTCGGCTGAGAGGACTAAGCCCGGCTGCCCAGAGGCGGAGGCGGCCTCGAGGCCCAGCGCAGGATTATTCAAGATAGAGTTGTAGCCATTTTCAACAAGGATCGATGATAAGAATTTTTCTTTTTAAAAAAAGATTTTCAAGTTAAAGATGAAAGGAAAATACTGGAATTTTTCGGATTCTAACTCGTGAGATAATGAATATAGTTTTTCACAGTGACTTCTGATGGAACCTTAGTAAAATTCATTGTTTGTCATGCACCCAACTGGGAACATGGATGTTGGCTTTTCTCGTTCTGCTGTTCATACACTGTCAAGAAGCCACTGCAAAAACATCAAGCAAAAAATTTCCCAGTGGGAAGGAAGAACTAATGGTATATCTAACCCAGATAAGTGGCATGCAAAGGACTTTGGAGTGAGATATAATAACTGTAATCAAGAGAGTCTTCTTAAGAAAACGCCTATTGCTGAGGGAAAGAGCAAAAAGCTGGATGTAACCAACACTCAAAATGTTGATCAAGGTATTAATGAAGACGCCAAAAGCCACAATCAAAGTGAGGATGAAAGTGAAAAACGTGAATATGATGATACACACTTATTTAAAAATGAATCAGAACCCAACTGGGTATGTTCTCGGGTCAAACAAATTGAAAACTGGAAAGAAGTTTTAGATCCAGAGACTTCATTACCTCCAGGAAATTTCTATACCTCACAGATATTGTGGAAGAAAATAGAAGCACTTTCCCCAGATAAAGTCTTAAATTTGGCTTTGGAGCATTGTGGCTCTTCAGAAAAAGAACTGAATTTCAGAGTTCTGGATAGTTCATATGGAGTAACGAAGAGCTTAGAAAACATTTACTCTGAGCCTGAGGGACAAGAATGTGGACCTTCTATAAATCCTTTGCCAAAACCTCGTAGGACATTCAGATATTTATCTGAATCTGGCCCTATGCCATATAAAGAAAGAAACTGTGACAGAAAATACTGTGAAAATAATTCTTGTGCAGAATCTTCTTTGGCCTCTTCTCAGGAACCTGAACCAAAGAAATATGGTGGAAAAATCAGAGGGAGATCTAAAAGGAAATCCTTTGAGTTTGAGGACATTCAGCACTTTCGAAATCGGAACTCGCAGAAGATTCATGAAGAACTTGGAAGAAATTCTGGCTCAGCACTTTATTACACACAGTCTGAGGACAATATCTATGAGGATATCATATATCCTACCAAAGAAAATCCATATGAAGACATTCCAGTGCAGCCTTTGCCCCTGTGGAGATCCCCTTCAGCATGGAAGCTCCCACCCCCGAAAAGTGCTTTCAGAACACCCAAGCTTCCTCCCAAACCTCATTTCCTTCACCGGAAGACTATGGAACTGAAGAACTCACAAGCTTATATAAGGTCAAAGCTCACAAAGGATACTACATTGCCAGTCACGTTAACAGAATGGAAGCTTTTCCGAGCTGGAGAAGTTGCAAACAGGAAAAGGAAAAATCTTCCAAGGTTTGTATTAAAAATAGATGATATATTTGAGTCTAAGAGAGGGAAGAAAAAGGTAAAGTTACACCCTTACACTGGAAAAGATGCACCTCCCTCTAAAGGTGAACCCGGTGGGTACGAAAGTGATGCCGAGTATCTACCAAAGAGTGAGTGAGTCAGTGGGGCTGCTCCCTTTCGCGTGATGATCCTGGTTATAGGTGGAGTCGCACCTACCTTTGTGATGAAGCATATTTTCTACACCAAGTTTCACTTTGTCGGTGATTTCTTCATTATAAGATCCTGTTGAGATTTAGGGAACTAAACAATACACTGTCAGATGTTGTGACAGCATTAAAAATCTCCCATAATTGAGAATGGATACATGTATATGGCTGAGTCCCTTTGCTGTTAACTATCATAACATTAATCAGCTATCCCCC EMBV3_09296 AATTCTTTGTTCGCCATGTTACCCATCTTGGAATGAGGCGTGAGTGTCAGCTTCCGCTCC Gene GeneID:512239|TTC17:XM_002693528:126_cdna Constitutive 0 NULL GeneID:512239 15 GENE TTC17 NULL tetratricopeptide repeat domain 17 EMBV3_35104 TCTCAAAGCATCACGGGATCAACCAAGCCCTAGGAGCCTTACCCGACAAAGGGGACCTGA Gene GeneID:505437|C15H11orf49:NM_001038037:33_cdna Constitutive 2 NULL GeneID:505437 15 GENE C15H11orf49 C11orf49 MGC133722 chromosome 11 open reading frame 49 ortholog EMBV3_14233 TGAGCCTTCCCATTTTTTTCCTGGATGGACCATATTCATCAAGACTACTTCAAAACTCTG Gene GeneID:781881|SNX31:XM_002692780:45_cdna Constitutive 2 NULL GeneID:781881 14 GENE SNX31 NULL sorting nexin 31 EMBV3_34660 AGAGTTTAGACTAGTTAGTGTTCTCTGAAGCCGGTAAAGCGTCTGCCTGTAATGCAGGAG Gene GeneID:784741|LOC784741:XM_002707911:199_cdna Constitutive 0 NULL GeneID:784741 15 GENE LOC784741 NULL hypothetical LOC784741 EMBV3_04600 CAAGAGACACACGTCGTCTTGGTGCAACAATTGATGTAGAACATTCTCATGTTCGGTTTC Variant GeneID:506754|RRAGB:NM_001075279:109_cdna 281^364 1 EMBV3_03372 GeneID:506754 X GENE RRAGB MGC139815 Ras-related GTP binding B EMBV3_06589 GATTTCTCTGAGCCACGGCAGGTCTCTCATAGCAGAAGCCCTAGTGTCATACACACCCAT Gene GeneID:511110|STMN3:NM_001083666:985_cdna UTR3_Alt 2 NULL GeneID:511110 13 GENE STMN3 MGC151650 stathmin-like 3 EMBV3_14747 TCTTTTACAGTACTTACTAAAAAAAGGTCACCTGCCATATGTAAGACTGAGTCTGTTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24776 CTGGAAAGTACAGTCCTCATGCTTTGGGGAGTCAACAATGGCGCCTACAGGTAAACACTG Gene GeneID:539126|NTRK3:XM_002696512:108_cdna Constitutive 0 NULL GeneID:539126 21 GENE NTRK3 NULL neurotrophic tyrosine kinase, receptor, type 3 EMBV3_34114 CTTTCCAGAGTCCGGTGCAGAGGCCTCCCGATATGCAGATACATTATTTAAGTCCTCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25299 GGGTGGATTGCCACTTTAACCACGCTCCAATCTCCCACCCAACCAAACTCTCCGCTAAAA Gene BVT0101_047154 + 1 EMBV3_15789 GK000008.2:80900919-81510918 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26111 GAAGGGGAGTACAGCAAATTCTTTATTACGATAAGTGGGCGGAGAAGCCCGCCTTTGGGA Variant GeneID:504245|ARHGAP17:XM_002698028:229_cdna 697^778 1 EMBV3_24924 GeneID:504245 25 GENE ARHGAP17 NULL Rho GTPase activating protein 17 EMBV3_08029 CTATGAACTTGATGGACGGATGCCTTTTCCAGTGAACCATGGCACCAGCTCAGAGGACTC Gene GeneID:514394|UCHL1:NM_001046172:26_cdna Constitutive 2 NULL GeneID:514394 6 GENE UCHL1 MGC133697 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) EMBV3_07151 CCAAGGAGGATGGCTTGCTTGGGAAATGAGTAATCCAGTATGCCAGCTACCCCAAAGATG Gene BVT0102_016933 + 0 NULL GK000028.2:18192569-18348885 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04471 GCACTCAGAAACAGCCTGACTACCATCCCAATTCCTGTGTTGGCGGCTCAGAGACACTAT Gene GeneID:787830|LOC787830:XM_002693198:377_cdna Constitutive 0 NULL GeneID:787830 15 GENE LOC787830 NULL similar to cOR56B2 olfactory receptor family 56 subfamily B-like EMBV3_10346 TCAACAATGAGTACCTCAGCCCCGAGCTGCGCGGCCAGGTCTCCTGGAGAATGTCGGGAA Variant GeneID:510538|ASF1B:NM_001075453:19_cdna 476^788 1 EMBV3_16611 GeneID:510538 7 GENE ASF1B MGC139875 ASF1 anti-silencing function 1 homolog B (S. cerevisiae) EMBV3_40706 TTATACATTTATACTACTGCATTTGAGATGTCTTATTTGGTAAACCCATTAAGCTATGAC Gene BVT0102_008298 + 0 NULL GK000030.2:33551348-33558426 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17932 CCCCAAATCAGGTCAAATCAGAAACTCCATACCGAACTCCAAAGAGTGTGAGAAGAGGGG Gene GeneID:540206|MASTL:NM_001113765:142_cdna Constitutive 0 NULL GeneID:540206 13 GENE MASTL NULL microtubule associated serine/threonine kinase-like EMBV3_32039 CCAACATCAGGTTCTTCTTTAGACTGGGCTTACAACCTGGGCATCAAACACACATTTGCC Gene GeneID:528454|CPA3:XM_002685028:206_cdna Constitutive 0 NULL GeneID:528454 1 GENE CPA3 NULL carboxypeptidase A3 (mast cell) EMBV3_32664 AACAGTGTTCAGGGAGTTCATCACAGCTGCTTTGGGAGGAAGCCAGATTCTACCTGTCAG Gene GeneID:528386|MURC:NM_001103264:2_cdna UTR3_Alt 2 NULL GeneID:528386 8 GENE MURC MGC160021 muscle-related coiled-coil protein EMBV3_12477 ACACGTTTGGACCATTGACCTTGGCAATCAGGAGGAGGTCGAAGATGCCGTGAAAGCGAT Gene GeneID:537595|MGAT5:XM_002685412:14_cdna Constitutive 0 NULL GeneID:537595 2 GENE MGAT5 NULL mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase EMBV3_03046 ACAAAAGCCTCTACTCTTACCCCTCAAGAAGAGACCCACATTAACCAGCCCACTGTCACC Gene GeneID:522965|CLIP3:XM_002694946:65_cdna Constitutive 0 NULL GeneID:522965 18 GENE CLIP3 NULL CAP-GLY domain containing linker protein 3 EMBV3_35918 ATAACTTCTACTTACTCTAAGGTATTCAAGGTGTGAAGTTTTTCAACATGAGTGGCCTTG Variant GeneID:525346|NCOA1:XM_002691465:323_cdna 114^274 3 EMBV3_22278 GeneID:525346 11 GENE NCOA1 NULL nuclear receptor coactivator 1 EMBV3_03743 ACATAACCACATTACTCATCATTCCAGTCATCGTTGCAGCCGCAGTCATTGTCCTTCTGC Gene GeneID:407110|IL13RA1:XM_002699475:61_cdna Constitutive 0 NULL GeneID:407110 X GENE IL13RA1 NULL interleukin 13 receptor, alpha 1 EMBV3_12761 TACTTTAGGGACTGGCTCAGGCACTTACCTCTGAGTATCCTATGGGTGAGGATAAGGACG Gene GeneID:407179|LRP8:NM_001097565:10_cdna Constitutive 0 NULL GeneID:407179 3 GENE LRP8 NULL low density lipoprotein receptor-related protein 8, apolipoprotein e receptor EMBV3_14021 AGGTGGGTGGCTTACAGTAGGTAAAGGCTCCACGTTTGATGACTTATTGAACACAGGGGC Gene BVT0102_156686 + 0 NULL GK000009.2:36844168-36918470 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39103 GGTCCTTTGGGTACACACCCTCGCTTATTTGAGTGGATATTGAGCTACTATGCTTCAGAG Gene GeneID:533724|ZUFSP:NM_001034594:22_cdna Constitutive 0 NULL GeneID:533724 9 GENE ZUFSP C6orf113 C9H6orf113 MGC129029 zinc finger with UFM1-specific peptidase domain EMBV3_42963 TCTTTGTTTTAATTCATGTGGTGGTTATGTCCTTTACTTTTTGATCAGACAGATTCACAG Gene GeneID:100297428|LOC100297428:XM_002689321:37_cdna Constitutive 0 NULL GeneID:100297428 7 GENE LOC100297428 NULL hypothetical protein LOC100297428 EMBV3_32843 TACAGCCCTGTGTGTAGACCAAAGCACCGAATCTCCTTTACCCCAACTGTTGCATCATGC Gene BVT0101_002543 + 0 NULL GK000002.2:27629888-27924667 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101999 TCONS_00102000 1 XLOC_061804 Coding TCONS_00101999 XLOC_061804 Coding Coding STK39 2:27921967-28160965 j TSS76088 4049 1 TCONS_00101999_5 428 0.0884168930600148 14 0.983116942890497 0.00128883427749824 0.000759831917088773 0.0010504106496205 0.000312675412722098 3.56851977251557e-05 1.76857628747384e-05 1.89317386260588e-05 1.24205599066733e-05 0.000173132446105771 1.45741400957835e-06 5.25409798665311e-05 1.8116284965888e-05 7.45947890975002e-109 1.34828534177691e-07 1.95593600643042e-05 2.99363839443191e-124 1.88862737410308e-299 0.000122601749616154 0.000643012767183374 0.000653031867419114 0.000382081747603937 1.05950501424196e-205 0 6.03561882499869e-06 0.00100815090452771 0.00125678899748171 0.000645526094452046 7.05932371378572e-06 7.47579076315877e-14 1.98505935980424e-287 NM_001075826.1 STK39 Bos taurus serine threonine kinase 39 (STK39), mRNA. 0.0 1209 100.00 0.165225981723882 NM_013233.2 STK39 Homo sapiens serine threonine kinase 39 (STK39), mRNA. 0.0 2138 93.07 0.347493208199555 TCONS_00101999_5 sp|Q9UEW8|STK39_HUMAN STK39_HUMAN STE20/SPS1-related proline-alanine-rich protein kinase; 0.0 801 93.79 0.997663551401869 2 coding 0 0 0 0 -0.243757603391196 0.126807816266136 -0.0538254381334421 0.337930400364768 AATTTTAAAAAAAGGACAATTTTGTATATTCAGTTTACCTAAAGCAGTGATTTGCTCTTCGGAGGACATTTGGCTATGTCTGGAGACCTTTTTGGGCTTCCCTGAGGGCTCAGAGATAAAAGCATTCACCCCAACTGTAGGTTTGATCCCTGGGTTGGGACAGGAAGGTTCCCTGGAGAAGGAAATGGCAACCTACCCCAGTATTCTTGCCTGGGAAATCCTATGGACAGAGAAGTCTGGCGGGCTACAGTCCATGGGGCTGCAAAAGAGTCGGGCTCAACTGAGAGAAGACCTTTTTGATAGTCATGACTTGAGAGTGAGGTGCTACGGCATCTAGTGAATTGAGGCCAGAAAAGACCTCTACAACACAGAGAATATCTGGCACAAAATATTTGAAGTGCTGAAGTTACTATACCCGGACATATACTGAGGTAGGTGTAAACACTTAACAAAGTTTAGCCTCTTTATTTTTTTCTAATGTTTTACAGTCTCTGACTGAACGTATTCTTTATGTACTGAAATGAACCTTGTTATTTTAAAGGCTTCCTCCCCTGTCATCTTTCAGTTTAAATTTAGAAATGGGATTTGAGGGAAAACTGCATATCAGTTGAATACTTTTTAAATACACATATTTCCAAGTTGTAAGTGCCATTTTACTCAGTTGTTTATGGAAACATTAACTTAAAATTCTAATCCAGTGCTTCTCTAAGTTAAAACTATAAATCATGCTCTGTTCTTCCTATATAAAAATGATGCCAAAGGCCACTGATAGTAAACATTCTTCTTCAGACCGACTTACTGGTAATAGTGATGGGTCTGCATTGAGTCATCAGTTCTTTCAAGTCATCTTCCTGGGAGCCACGTGGAAAGTAGTCAGCTCGGTACAGATATCTGGTATATGACTACAGAACCTTGTTCTTTGTGAGAAACTAAGCGATATAATTTAAATCTGAGCTATTAGTCTTGACAGCATTATATTTTCTTATTAAGTTCCAAGAACTTTCCTGGCCTTCAGAGTTTCCTGGCCTTCATGGTTCGAAAGTCAAAGTAAAAATTCATATGATAAAATGGAATTCATATTCATTTAAGCATTTTTCTTTTCCCTTAAAAACAGTCCTTAAAAGTTCTTCAGGTAGGGAACAGCACTCGAAGAGGTGAACAGTTGGAGCATTCCTGTTCCCTCTTATTCCCCTGCTTAAAACATCAAAGGCTAGAATTTAATTGTTCATGAAGTTGTCTGTTTCCTGACAGACATTAAAATCCACACACTGCTTTGGAACATTCCTTCATAAAACAATGTACAGCTTCTTTGTTCAGCATACAGCCCTGTGTGTAGACCAAAGCACCGAATCTCCTTTACCCCAACTGTTGCATCATGCTGTGAGAGACTAAGCATACTCATGTTCAGTTTCCATCAATATTTTGATTAGAATTTGTAACATTTCTCCTAATGAATTTCTGGGTTTCATCTGAATTATCTTTTAAAAAGTTTTAAGGAGATTTTTATATGTAAATAGAGGAGACAAAGTATCACGATTTTTCTGTTTTCTTTAAAAAAAAATGCTCATTTTTCTTATCCGATAGTTCTCATCACGACAACTACACACGATAATTTTGGCACCAATGACCATTATGACCATTGGGTCACTGCACCGTTTCAGCTTAAGAAAAGGATGGTGCAATCGTGGTCATCTCTACCAGGGGGAACACAGAGAACACTCAGTGTTAAATATGACACCTATAATTAGGAAGCCCTATGGTTATACCAGAGTAGTTTTAAGGATGAGGTAATTTTAGGAGCGTTGAAAAAGCAGCAATTAATTAAGTTTTCAACGCAGCTTGTGCTGTGGTACATTCTTTAACACCCAGTTATGCTCTGTAAAAGAAAAGCCTGCTATCTCTTGACCTATCGGGTTAGCGTGGCTTTGTTATTAAGGGTCTAAAATTTGAGATTTAGAGTTCAAATCTCTTACACTTATTCTAACTTTTTAGGCCCTTACATCACCTTCCTGGGATCCAAGCGGCTTGGAACTAATGAAGTCTGTGAACAGCCAGAGACCTAAGGCATCACGTTTCACTAAGAAAAAAACCAGAAGGTCTGCGATTAGATTAGGCAAGGTGGGGAATGGGTTATTGGCAGGTAGGGCGCCGGAAAGTTACAACTCGGGTTATTTTTTAACCGGCGCCCTACAAACGGCCGGCGTGTAGGTGGCTCACTCGCTAACTTGTAAATGAACTTCAGGTTCTCTTCACTTGGGGAGCCTTTCTGAATCTGAGAACCTGGCGGCGGTTCAACGACCCCGCCCTCGGGGTCCCCAAGGGACATCTTCCGGAGAGCCCGATTGTCTGGGGCGAAGGCTCAGGGAAAGCAGGGAGTGAGGGGCGAGGCACGCGGGTCCCGAACGCCAGCCCAACCCGGCCTCACTCTCCTCGGGTGGAAACTTCCCGGCAGCGAGTTAGGCGGGAGGGGGCGGCGGGGCGGCGGTTCCCCTTGCGGAGGCAGAGAACTGCGCGCGCGAGGCTCAGGGCGCGCGGCGAGCGCGGCGACCGGGCCGCCTCCTCCCCTCCCCGCCTCCGCCGGCGCTGCCTCCTCCCTCCGCCCGGCTCGGCCTCCTTCGCTCCCTCCCCTCGTGGCTGGCTCCGGCGGCGGCGGGCGCGGAGGGCGTGCGCCGGCCGAGAGGTGTCGGTGGCGAGGGAAGGGAAGTTTCAAGTGGAAGGTCGTCCGCCGGCTGACGCGTCCTCCCGGTCTCCTCCGGCAGCATCATGGCGGAGCCGAGCGGCTCGCCCGTGCACGTCCAGCAGCCCCAGCAGGCGGCCCCGGTGACAGCGGCGGCCCCGGCGACAGCGACAGCAGCGCCGGCTCCGGTGGCTCCAGTGGCCACGGCTCCGGCCGCGCAGTCGATCGGCTGGCCCATCTGCAGGGACGCGTACGAGCTGCAGGAGGTTATCGGCAGTGGCGCTACAGCTGTGGTTCAGGCTGCTCTATGCAAACCCAGGCAAGAACGTGTAGCAATAAAGCGGATCAACTTGGAAAAATGCCAGACCAGCATGGATGAACTATTAAAAGAAATTCAAGCCATGAGTCAGTGCAGCCATCCCAACGTAGTGACCTATTACACCTCTTTTGTGGTAAAAGACGAACTTTGGCTGGTCATGAAATTACTAAGTGGAGGTTCAATGTTGGATATCATAAAATACATTGTCAATCGAGGAGAACACAAGAACGGGGTTCTGGAAGAGGCAATAATAGCAACAATTCTTAAAGAAGTTTTGGAAGGCTTAGACTATCTACACAGAAACGGTCAGATTCACAGGGATTTGAAAGCTGGTAATATTCTTCTGGGTGAAGATGGTTCAGTACAAATAGCAGATTTTGGGGTAAGTGCTTTCTTAGCAACAGGGGGTGATGTTACCCGGAATAAAGTAAGAAAAACATTCGTTGGCACCCCGTGTTGGATGGCTCCTGAAGTCATGGAACAGGTGAGAGGCTATGACTTCAAGGCTGACATGTGGAGTTTTGGAATAACTGCCATCGAACTAGCCACAGGAGCAGCGCCTTATCACAAGTATCCTCCTATGAAAGTGTTGATGTTGACTTTGCAAAATGATCCACCCACTTTGGAAACGGGAGTAGAGGATAAGGAGATGATGAAAAAGTATGGCAAGTCCTTCAGAAAGTTACTTTCACTGTGTCTTCAGAAGGATCCCTCCAAAAGGCCCACAGCAGCAGAACTTTTAAAATGCAAATTCTTCCAGAAAGCCAAGAACAGAGAGTACCTGATTGAAAAGCTGCTTACAAGAACACCAGACATAGCCCAAAGAGCCAAAAAGGTGAGACGAGTTCCAGGGTCAAGCGGTCACCTTCATAAAACCGAAGACGGTGACTGGGAGTGGAGCGACGACGAGATGGATGAGAAAAGTGAAGAAGGGAAAGCAGCCTTTTCTCAAGAAAAGTCACGAAGAGTAAAAGAAGAAAATCCAGAGATGGTGGTGAACGCCAGCAACATCCCCGAGCAGATACAGTCCCTTTCTGTGCAGGACTCTCAGGG EMBV3_20457 AGAGCCATCCAGGTCGCTCTTTGCTCGCGGCGTCCAGACTGCCGTGATCAACGTCTTTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32541 CGGCTGCTGCGCGCCTGACGGCTCTTGCAGATGAACACATCTGTACCACGCAGTCCCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15863 ACCATCATCGTTCCTATGCCACCGAGGTTCCCCGAGCAGAAACTCTGGACCGTTTACAAA Gene GeneID:509230|CD99:XM_002700435:20_cdna Constitutive 2 NULL GeneID:509230 X GENE CD99 NULL CD99 molecule EMBV3_32026 CCTTGGCCAAACCCGACAAATGCCAATTCAGCTCAGGAGATATGGACAGTATTTCCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39980 TCATCCCAGCTGACATCATCTTCATTGTAAAAGAGAAGCTACACCCTCGCTTCCGCAGGG Gene GeneID:520270|DNAJB13:NM_001034536:10_cdna Constitutive 0 NULL GeneID:520270 15 GENE DNAJB13 MGC127935 DnaJ (Hsp40) related, subfamily B, member 13 EMBV3_21800 GCATGCGGGATTTCACTCCTTCAGGCATCGCTGGAGCATTTCAAAGACGTTACACCAAGT Gene GeneID:517777|LOC517777:XM_002696263:47_cdna Constitutive 0 NULL GeneID:517777 20 GENE LOC517777 NULL similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 EMBV3_28356 TTGCTGGTCTGACAACGGCCCAGCCATTCCTGTTGAGTATGACTTTGGTGATGCTGAGAA Gene GeneID:618581|ITLN2:NM_001101275:353_cdna Constitutive 0 NULL GeneID:618581 3 GENE ITLN2 NULL intelectin 2 EMBV3_31738 AAACCCTTGCATACCTTCTGTGCCAGGTGCTGTGATGACAGTCGGGGAGTGCTGAGAAAT Gene GeneID:540069|CIAO1:NM_001037482:92_cdna Constitutive 2 NULL GeneID:540069 11 GENE CIAO1 MGC127264 WDR39 cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae) EMBV3_13905 CCCAAGTCTCTGGAACCTCTGATGGAAATGAATAAGCGTCTAACAGAGGAACAAGCCAAG Gene GeneID:505383|DLG2:XM_002699051:46_cdna UTR3_Alt 2 NULL GeneID:505383 29 GENE DLG2 MPP2 discs, large homolog 2 (Drosophila) EMBV3_20417 GATGGAGGCTTTGTCCCCTGAGACAGTGAATCGGTGTTGACATCTGCTCCAGACCCTTTT Gene BVV0102_038491 + 0 NULL GK000013.2:78873172-78882066 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046468 TCONS_00044134 TCONS_00046467 TCONS_00046469 TCONS_00046470 TCONS_00046466 2 XLOC_026719 XLOC_026122 Coding TCONS_00044134 XLOC_026122 NonCoding NonCoding - 13:78874605-78882055 - TSS32498 372 1 TCONS_00044134_2 95 2 0.950328903208484 0.000395558948857219 7.59037099057161e-05 0.000811152234658904 0 0.000141017788153093 9.61574704294442e-06 4.17987294745862e-292 0.000216230796114287 0.000102822502551315 0.000461463969793687 0.000186011367901775 7.47636325226314e-05 0 0 5.07937788100909e-05 0.00283412090113862 0.00279659462249141 0.00553782889362704 3.85532446585299e-05 0.00385676149011382 0.000191576873918649 0.00376658934669783 0.000856877581474332 0.000175627204847004 0.000179558605953694 0.000389388289809369 7.30553548456205e-05 0.00140950547344901 0.000557453027887013 0.00349314452815432 NM_199129.2 TMEM189 Homo sapiens transmembrane protein 189 (TMEM189), transcript 5e-31 138 71.38 0.766129032258065 0 noncoding 1 0 0 0 -0.78006097163876 0.0106491409749454 0.0381769040190393 0.463280709745041 CCCTGCGCTTGAGCTGGTAGCTTCTGCTGATGCCGATGAAGCCAACTCCACCAGGGGAGGTCCTCCTTTGTTGACTCATCTCCATGCCTGGTGCCAGTAAACCTTTGCAGAAGGGATTCCTCAGTAGGATTCTGCCTCCATGTCTCTACCACCACGATCTACATGAAAATTCCTCACGGAACCATGGGTCCCCCTTCCAAAAGGGTCTGGAGCAGATGTCAACACCGATTCACTGTCTCAGGGGACAAAGCCTCCATCCTAGCAGAGAGCCGTGGGGGAAGCTGGGAATAGGGGTGGGTGGGGCCTCACCCTCCAGCCTCCTTACTTCCCCTCCCCCAGGCAATCAGGAAACAGGAGGCAGCCCAGGTTAAG TCONS_00046470 r 5' 0 TCONS_00046465 r 5' 1353 EMBV3_31629 GTGTAGCCCATTCTTACCTGGCGTGTATGCTCGGGTCACCAAGTTCATTCCCTGGATTCT Gene GeneID:618826|CTRB1:NM_001105454:127_cdna Constitutive 1 NULL GeneID:618826 18 GENE CTRB1 MGC159723 chymotrypsinogen B1 EMBV3_04437 TAAACGATGCCCTTGATGGTGGAGGAAATGAAGAATCGCCAGGCGTGATCCCGGGCATCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28528 GTCCGACGTGGACCAGCGCTGCCTGGACAGGAACCCCGAATGGGGGCTGCGGGACACCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34832 GGCCAATGTCTGATCCAGGAGTGTTTTCACAGCATCAAGCAATGGAGCGAGAGAGTACAG Gene GeneID:508405|ANKRD17:XM_002688348:134_cdna UTR3_Alt 2 NULL GeneID:508405 6 GENE ANKRD17 NULL ankyrin repeat domain 17 EMBV3_33911 GATCCAGCGCAAATCTCGGATGCCAGAAGCCAGAGAGCCACCTGAGAAAACCAATCTCAA Gene GeneID:509978|LMOD3:NM_001100332:26_cdna Constitutive 0 NULL GeneID:509978 22 GENE LMOD3 NULL leiomodin 3 (fetal) EMBV3_42337 CGAACCTGCAAGTGATTTCTTGTACCTGGAGGGTCCTCTGTGTGTTTCAAGGGATGAGAC Gene BVV0102_238218 + 0 NULL GK000002.2:130795744-130830284 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106876 TCONS_00104032 TCONS_00104033 2 XLOC_062919 XLOC_062275 NonCoding TCONS_00104032 XLOC_062275 NonCoding NonCoding - 2:130822394-130824594 - TSS77126 571 2 TCONS_00104032_2 47 0.352014010507881 4 0.742155525238745 0 0 1.27378595796335e-07 0 0 9.11929573397841e-12 0 7.62796837176502e-08 5.52625408069337e-05 0 0 0 0 0 0 0 0 0 0.000718749018676061 7.6728308278259e-08 1.6635968722113e-10 0 0 0 0 5.73451053201319e-17 7.43163403213031e-08 0 0 0 0 noncoding 0 0 0 0 -0.0327291810597357 0.814630513519224 0.012635667068803 0.791545054698287 AACACACACAGCACAATCACAGAAGAGGCTGAGAGTGTTTACGAACCTGCAAGTGATTTCTTGTACCTGGAGGGTCCTCTGTGTGTTTCAAGGGATGAGACAAGATACACCGGTGGGGCCAGGTGGTTCCTAGAATGGTGATGCCAAGTACAGGAAGTAGAAGAGAGTCCAAAGCTGCTTTGGGAAGCCTTCCTTTAACTCATGCTATGAGAAGTTGGGTGGCCTAGGTTCAGAACCAGGGTGCGTCTCTAATGCTGTGCAAACTCGGGTGAATCCTCTCTGGCCTGTGAGCATCTTGAGGGCAAAAATTATCTCATTTATTCCAGAATTCACAGATTCAAGCAAGGACCTGTCACATAAGAAATGCTCGAAGTAACTAAGCTGAAGCTGATGTTTACCGTCCCGGGCATGTGTCATCTTCTATTTATGCATGCAAAACCTGCAAGTCTATTGTTACATATATTTCAAAAGTTTATATAAATGGTATAATACTGTACACATTTCTTTGCCATTTATTTTTTCATTCCATATTTATGTTCTGGAGATTTACCATATTGGGAACATGTTGATC TCONS_00106878 r 3' 5691 TCONS_00106878 r 3' 7890 EMBV3_37772 TAGGCAGATCTACAGAGATAAAGGAGATTAGTGGTGGTCAAGGGCTGGGGAGAAACGGAG Gene BVT0102_258922 + 0 NULL GK000014.2:57342029-57479101 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053547 TCONS_00053548 1 XLOC_031764 Coding TCONS_00053547 XLOC_031764 NonCoding Coding - 14:57365311-57463970 - TSS39473 1009 4 TCONS_00053547_1 40 0.637264618434093 3 0.989803158385534 0.000377934923150762 0.00157337255314619 0.000517871660763385 0.00047377313068527 0.00020811572744451 0.00135044836268379 0.000887442028740645 0.00103440827256265 0.000723720226600419 5.11753975462077e-05 0 0 4.83496220624986e-05 0.000348106232567082 0.00017476374525262 0 0 0 0.000292906313257433 0.000897202678323184 0.000674857422075785 0 0 0 0.00152569790429973 0.000504895372730752 0.0015683344395081 0 0 0 XM_586437.7 TMEM30B PREDICTED: Bos taurus transmembrane protein 30B (TMEM30B), mRNA. 3e-27 127 93.98 0.0812685827552032 NM_000916.3 OXTR Homo sapiens oxytocin receptor (OXTR), mRNA. 4e-38 163 70.36 0.295341922695738 0 noncoding 0 0 0 0 0.0612581130850214 0.646770789556312 0.0491395587622128 0.441762030616311 AGTGCCTGCCCTACTTGTAATGATTTAAAACCCTCCCGTGGTCACCTCCTTGTGCTTCACAGAGAGCAGAGCTGGTAGAAGCAGTCAGTTCTAAGAAAGGCTGCATTCAGCAAGAGCAGTGAGAGGACCAGTTAGTGACTCCACGTCTACTGAGCTCAATGACTGCAGGACTCCAACTGTATACAAAGCACCTGGGACACTGCTTGGCCTCCACATGTGGGATCTTAGTTCCCAGACTAGAGATTGAACCACACCCCTGCATGGAAATTGTGGAGTCTTAACCACTGGACTGCCAGAGAAGTCCCTCCCACCAATCAACTTTAAAGCATTTTCATCATCCCCTGCCTCTGCCCAACATGTATGCTGCTGCTGCTAAGTCGTTTCAGTCGTGCCCGACTCTGTGCAACCCCATAAATGGCAGCCCACCAGGCTCCCCCATCCCAATTACTCCGTTTCTCCCCAGCCCTTGACCACCACTAATCTCCTTTATCTCTGTAGATCTGCCTATTCATAGAAATGAAATTACACATGTATAGCCTATTGCAACTGGTTTTCTTCACTTATTGTAAGGTTTATACATATTATTGGTATGTATCAGTACTTCATTCTTTTTATGGTTGAATAGTATTTTTTTGTGCAGATATATCGCATATTATTTATCCATCCATCCATTTGGGTTGTTTATACTTTTTGGCTATTATGAATGATGCTGCCGTGAACATTAGTATACAAGTTTTTATTTCTCTTGGGTATATATCTAGGCATGGGATTGCTGGGTCATATGATAACTCAATGTTTAACCTTTTGAGGAGCTGTTAGACTATTTTCCAAAGCAGCTTACATATTGTTCATAGTTCTTGATTTCTCTTATTTTTCTTTCTCACATTTGATTCTACTGGGTTTCTGAAGCACCAGTAATGAACCTCCCAGCAGAATGTATTACATCAACATTATAAAAGAATATGCTTCATGCTTTTATTACCTTGTACCTATAGTAACATACCCTCAC TCONS_00051986 TCONS_00051988 TCONS_00051989 TCONS_00051990 TCONS_00051991 TCONS_00051993 TCONS_00051994 r 3' 22505 TCONS_00053557 TCONS_00053558 s 3' 15132 EMBV3_14577 TCAAAAGCTCCTGAATGTTTGAGGATCCCATGCAGCTCTCTGGCCTGCAAGATGCTCTGA Gene GeneID:533304|PQLC1:NM_001076893:23_cdna Constitutive 0 NULL GeneID:533304 24 GENE PQLC1 NULL PQ loop repeat containing 1 EMBV3_00341 CAAACTGCCAGCCCACCCCTCTCGTCCCTCTGTCTCACCTTGTATTTGTGTCACTGTAAA Gene GeneID:510397|PRLHR:NM_001030300:14_cdna Constitutive 0 NULL GeneID:510397 26 GENE PRLHR GPR10 PrRPR prolactin releasing hormone receptor EMBV3_03311 CATGGGCACCACCACAGGCAGCCCGATTATGTCGCATTGTAGTGATAAGGGTTTGCAGAT Gene GeneID:100336703|LOC100336703:XM_002683969:5_cdna Constitutive 0 NULL GeneID:100336703 Un GENE LOC100336703 NULL Cathelicidin 1-like EMBV3_08935 GGAGGGTCTCGAACATCTGGACAAAGCGCAGCCTCTCTGTAAATGGCATGCTCTTGCCCT Gene GeneID:524447|LRFN2:XM_002697230:395_cdna Constitutive 0 NULL GeneID:524447 23 GENE LRFN2 NULL leucine rich repeat and fibronectin type III domain containing 2 EMBV3_22031 TTTTTAATTCTATTTTGGAATTTTTCTTTAACTCTTCCTATTCATTCCAGAAATGATTCT Gene GeneID:282472|SLCO1A2:NM_174654:10_cdna Constitutive 3 NULL GeneID:282472 5 GENE SLCO1A2 SLC21A3 solute carrier organic anion transporter family, member 1A2 EMBV3_12487 CCGGGTATCACAGGTCCTGCTGTGGCCTTTCCTTGATGTGACACTTGAACTAGTCGATTT Gene GeneID:537016|CPEB3:XM_002698375:1_cdna UTR3_Alt 2 NULL GeneID:537016 26 GENE CPEB3 NULL cytoplasmic polyadenylation element binding protein 3 EMBV3_38234 GGCAATGAGTACAGACAAATTCACTCTTCTCTATCAAGAGCAACAGCTAACAGCCTGTCC Gene GeneID:515491|TMEM2:XM_002689646:8_cdna Constitutive 0 NULL GeneID:515491 8 GENE TMEM2 NULL transmembrane protein 2 EMBV3_22533 CCTTAGGAAATAGAACACAAAACTCAAGTGCTGGGGACTTCCTTGGCGGTCCAGTGGCTA Gene BVV0102_155650 + 0 NULL GK000007.2:48527245-48620065 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38639 GGTGGAAATGCGTGGCATCTACGCCAAAGTGGACCACGGGGCCCTCTCGCAGGCCCTGCG Variant GeneID:617710|BCAS4:NM_001076474:1324_cdna 305^382 2 EMBV3_37580 GeneID:617710 13 GENE BCAS4 MGC152217 breast carcinoma amplified sequence 4 EMBV3_36368 ACTATCCGTTACCTCGTGCAGCACAACATGGATTGGGAACTTGCTGGTGCCCAATGACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20735 GGGTTGAATGCCCCAACCAAAAGACGAAGACTGGCTGAATGGATACAAAAACAAGACCCC Gene BVV0102_234948 + 0 NULL GK000009.2:73937177-73977643 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00111527 TCONS_00208613 TCONS_00148278 TCONS_00214738 TCONS_00249013 TCONS_00115729 TCONS_00209773 TCONS_00220662 TCONS_00251890 TCONS_00066215 TCONS_00187806 TCONS_00152890 TCONS_00251713 TCONS_00135528 TCONS_00207978 TCONS_00197486 TCONS_00208128 TCONS_00090409 TCONS_00148452 TCONS_00091329 TCONS_00252237 TCONS_00189889 TCONS_00177994 TCONS_00250442 TCONS_00095034 TCONS_00048822 TCONS_00207077 TCONS_00088289 TCONS_00049393 TCONS_00244654 TCONS_00187583 TCONS_00233691 TCONS_00089425 TCONS_00218396 TCONS_00091802 TCONS_00189806 TCONS_00152647 TCONS_00148253 TCONS_00072406 TCONS_00148670 TCONS_00019962 TCONS_00207846 TCONS_00089139 TCONS_00239410 TCONS_00250939 TCONS_00088086 TCONS_00166140 TCONS_00008700 TCONS_00252006 TCONS_00046648 TCONS_00238893 TCONS_00244651 TCONS_00239411 TCONS_00162783 TCONS_00038382 TCONS_00040697 TCONS_00129427 TCONS_00166330 TCONS_00238308 TCONS_00161836 TCONS_00107533 TCONS_00055678 TCONS_00107833 TCONS_00031280 TCONS_00249573 TCONS_00251994 TCONS_00055304 TCONS_00210178 TCONS_00017462 TCONS_00218852 TCONS_00244653 TCONS_00200531 TCONS_00249090 TCONS_00071379 TCONS_00020171 TCONS_00222057 TCONS_00056147 TCONS_00021194 TCONS_00064858 TCONS_00019991 TCONS_00040834 TCONS_00006828 TCONS_00198434 TCONS_00019197 TCONS_00250369 TCONS_00250030 TCONS_00250581 TCONS_00040896 TCONS_00129450 TCONS_00175881 89 XLOC_131641 XLOC_067427 XLOC_127126 XLOC_090160 XLOC_130757 XLOC_151956 XLOC_069898 XLOC_128284 XLOC_133979 XLOC_154831 XLOC_040929 XLOC_113849 XLOC_092655 XLOC_154654 XLOC_081751 XLOC_126492 XLOC_119147 XLOC_126641 XLOC_055190 XLOC_090332 XLOC_056104 XLOC_155178 XLOC_115926 XLOC_107767 XLOC_153385 XLOC_057631 XLOC_028953 XLOC_125596 XLOC_053076 XLOC_029524 XLOC_150512 XLOC_113628 XLOC_143172 XLOC_054210 XLOC_131716 XLOC_056573 XLOC_115843 XLOC_092412 XLOC_090135 XLOC_044175 XLOC_090550 XLOC_010640 XLOC_126361 XLOC_053925 XLOC_146076 XLOC_153882 XLOC_052873 XLOC_100978 XLOC_004257 XLOC_154947 XLOC_026788 XLOC_145559 XLOC_146077 XLOC_099664 XLOC_022207 XLOC_024513 XLOC_078140 XLOC_101168 XLOC_144975 XLOC_098721 XLOC_063443 XLOC_033486 XLOC_063743 XLOC_017528 XLOC_152516 XLOC_154935 XLOC_033112 XLOC_128688 XLOC_009039 XLOC_132171 XLOC_122183 XLOC_152033 XLOC_043150 XLOC_010849 XLOC_135366 XLOC_033950 XLOC_011867 XLOC_039582 XLOC_010669 XLOC_024648 XLOC_002390 XLOC_120088 XLOC_009877 XLOC_153312 XLOC_152973 XLOC_153524 XLOC_024710 XLOC_078163 XLOC_105660 Coding TCONS_00222057 XLOC_135366 Coding Coding - 7:70682995-70686837 - TSS166055 3842 2 TCONS_00222057_5 115 0.997917751171265 1 0 5.05901659931964e-07 4.79493141964255e-06 0 0 5.71135386159485e-07 1.33005749818789e-07 0 1.71054331302813e-07 1.30064629441795e-06 1.07092175724304e-06 1.48958039000441e-07 4.13638474427097e-06 0 2.44871816558218e-07 1.59623789052634e-07 0.00332700385437757 0.000192296171611 0.00859026605852141 1.86645827677117e-06 1.07770000193695e-05 6.58452760786576e-07 0.000464821333825734 0.000262264095623234 0.000504714169171867 5.63546402276529e-06 1.83380325625921e-06 1.6944788577739e-06 4.58341979923324e-06 6.31781897174857e-06 2.73853284638068e-06 XM_588946.7 FAM114A1 PREDICTED: Bos taurus family with sequence similarity 114, member A1 (FAM114A1), transcript variant X3, mRNA. 4e-114 417 93.48 0.0715773034877668 TCONS_00222057_9 sp|P11260|TR22_MOUSE TR22_MOUSE Putative transposase element L1Md-A101/L1Md-A102/L1Md-A2; 2e-22 90.9 45.26 0.92156862745098 1 noncoding 1 1 1 1 -0.386333743709643 0.297671293447831 -0.0297939106243291 0.554882846237326 CCAGTACTTTGGCCACCTCATGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGAGACGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGATGTGAGTCTGGATGAACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGTGATTCCTGGGGTCGCAAAGAGTTGGACACACTGAGCGACTGAACTGAACTGAACTGAAGACATCACCAGACCCACTCACAGAACAAAGGACTGAGCAGAACTAGCCAGCTGTGGATGGGCCCATCCCCCACCGGAGACAAGCAGGGGAGGGCAGCCAGAGCCGGAAGGGGGCAATCTCGACCTCAGAGAGGCATCCTCTACCAAACTGCAAGCAGGCTTCACTGCTAACCAAGACTTCTTGGGATTCTGGATGGTCAATCCACTGGGAGGATCACAACCAGAGATCAGCCTCCCAGAAGAGACACACAGATCACCTGAGAAGGCGCGGCCGCTGTACACCCAGAACACCGAGCGCCGGACGGGGAGGCCATAAGACACAGCCTCCAACAGGGGGTGGGGGACTGTACTCACCAAACACCTGGTCACCTGAGCTGCTCGGACCTGGGAAGGGCACAAAATGCAGGCCCAACCAAGTCTGAGCCTTTGTGGACTACCCGAGAGCCTGAACCTGAGCGGCTTAGACCTGGGCAGTGCATGCAACCCAGGGCCTGCCACAGACAGTTCCCCGCAGAGCAACCTAGAGCCTGAGCAGTGTAGACTGGGAAAGCACACACGCCGTGAGCAGGGGCAAACCTGGTGTGGCCGAGACACTGCGAGCACTCCCCACACATGCCAGTGATATTTGTTTGCAGTGTTCCTCCCTCCCCACAGCACGATTGAACAAGTGAGCCTAAGAAAAGTGACCTCCACCAGCCCCTTGTGTCAGGGCGGAAATTAGACACTGAAGAGACCAGCAAACAGAAGAAGCTAAAATAAACAGAAGGAACCGCTTTGGAAGTGAGAGGTGCAATAGATTAAAACCCTGTAGTTAACACCGACTACATAGGAAGGGGCCTATAGATCTTGAAGAACTATAAGCCAGAGCGAGGAACTATCTGAAAATGAACTGCCCCAAACTGTCTGCAACAGCTCCAGAGAAAGTCCTAGATATATTTTTTACTATTATCATTTTATAAATTTTCATAAAATTTTTTATATTTTTAAGTCCTATATTACTCCTTTAATTTTTATTTTTATAACCTACTACTACTACTACTCAGTCGCTTCAGTCATGTCCGATTCTGTGCGACCCCAGAGACGGCAGCCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCACTCAGTCGTGTCTGACTCTTAGCGACCCCATGGACTGCAGCCTACTAGGCTCCTCCATCCATTGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGTTATAACCTACTATTACCTTGCAAAAAAAAAAAAAAAAAAAAAAGACCCTATTTTTAAAGCAAACTTCATATATATCTATATATTTTTTATAATTTTGTGACTTTGTTTTGTTTTTTTTAATATTGTATTTTTGAGAATCTAACCTCTACTCTAGATTTTTAATCTTTGCTTTTTGGTATTTGTTATCAATTTTGTACATTTAAGAACCCAATCTTCAGTACCCATTTTTACTTGGGAGTGAGATTACTGGCCTGATTGCTGTCTCCCCCTTTTGACTCTTCTTTTTTTCCACCAGGTCGCCTCTATCTCCTCCCTTCCCCTTCTCTTCTCTACCCAACTCTATGAATCTCTTTGTGTGTTCCAGGCTGTGGAGAACACTTAGGGAACTGATGACTGGCTGGATCTGTCTCTCTCCTTTTGATTCCGCCTATTATCCTCCTGGCTACCTCTGTCTCTCTCCTTTTGATTCCACCTATTATCCTTCTGACTACCTCTGTCTCCTTCCTCCCTCTTCTCTTCTCTGTGTAACTCCATGAACATCTCTGAGGGATCCAGACTGTGGAGAACACATAGGAAGTGATTACTGGCTAGCTTGCTCTCTCCCCTTTTGATTCCCACTCTTCTCCAAACCCACTGACATCTCAAAACTCACTACTGGACACTTCATTGCACTCCAGAGAGAAGAAACCCAGCTCCACCCACCAGAGCACTGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCCATCCAACCCCACCCACAGTGAGGAACCTCCAAAATAAAAAGGAACCACAAACTGCCAGAATATGGAAAGGCCACCCCAAACACAGCATTATAAACAAGATGAAATGGCAGAAAAATACTCATCAGGTAAAGGAACAGGATAAATGCCCATCAAACTAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAAATGACCCAAAATCTTGAAAACAAAACGGAGTCACAGATAAGTAGCCTGGAGACAAGGATTGGGAATATGCAACAAATGTTGAACAAGGACCTAGAAGAAATAAAAGAGACAATATATAATGAATAATGCAATAAATGAGATCAAAACCCTCTGGAGGGAACCAACAGTAGAATAATGGAAGCAGAAGATAGGATAAATGAGGTAGAAGGAGTGTTAGAAATAAATGAAACAGAGAGGAAAAAAGAATTAAAAGAAATGAGGACAAACTCAGAGACCTCTGGGACAATGTTAAACAACCCAACATTCGAATCATAGGAGTCCCAGAAGAAGAAGACAAACAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAGTCACCCAAGTCCAAGAAACCCAGAGAGTCCTAAACAGGGTAAACCCAAAGCGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAGTATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGCCAGAAGGGAATGGCAGGACATACTTAAAGTGATGAAAAAGGAAAAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCACTCAAATATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAACCAGCTCTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAGAAAGGGTGTATAAACTCAAACCCAAAACAACAAAGTAAACGGCATTGGGATCATACTTATCAATAATTACCTTAAATGAAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAAAAACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGTGATGGAAAAAGATATTCCATGCAAATAGAGACCAAAAGAAAGCAGGAATAGCAATACTCATATCAGATAAAATAGACTTTAAAACAAAGGCTGTGAAAGGAAACAAAGAAGGATACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATGCACCCAACATAGGACCACCACACTATGTAAGACAAATGCTAACAAGTATGAAAGGGAAATTAACAGTAACACAATAATAGAGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAAATAAACAGAAAAT TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 24667 TCONS_00217600 TCONS_00217601 TCONS_00217602 TCONS_00217603 TCONS_00217604 TCONS_00217605 TCONS_00217606 TCONS_00217607 . 3' 28508 EMBV3_18386 TCTGGATTTTCAGGATTTTCACCTTCTATGGCAGCAAGCCCTGTTGGATCTCCAGTGGCC Gene GeneID:515127|NUPL2:NM_001077923:20_cdna Constitutive 2 NULL GeneID:515127 4 GENE NUPL2 MGC134117 nucleoporin like 2 EMBV3_23164 AGGTGGAGCACAGCATCTCCAGGAGCCTTTCGGAAGAGGAGAGCCCCTTCCCACCCACTT Gene GeneID:506467|TREM2:NM_001079580:240_cdna Constitutive 0 NULL GeneID:506467 23 GENE TREM2 NULL triggering receptor expressed on myeloid cells 2 EMBV3_38777 TTTAAAAGAACTATGTATTTTATCTAGCAGAGAGAACAGAGAAATTATGTGGATTTATTG Variant GeneID:541255|NARG2:NM_001076265:118_cdna 387^546 2 EMBV3_42072 GeneID:541255 10 GENE NARG2 MGC140685 NMDA receptor regulated 2 EMBV3_19247 AGGACCGGGGTGACGGGAGTAGAGTGTTCAAACTCAGGAGTCTCACAAATACAGGAGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32739 TCATAGCTCACGCTGCCCTCGACCTCGTAGATGAGAACATGTGGCTGTCGAACAATATGT Gene GeneID:616748|TRAPPC2:NM_001034796:38_cdna Constitutive 0 NULL GeneID:616748 X GENE TRAPPC2 MGC127642 trafficking protein particle complex 2 EMBV3_24010 TGAGGTTCAAGATCAAGTTGTGACGTGGGTTCCTCGTGAAGGAGGTGAGGGAGAATGTGC Gene BVV0102_011951 + 0 NULL GK000001.2:18233155-18719634 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37246 TGCTAGTGGGAGTGTCATGGGTGGGAGGCTTTCTTCACGCAACCATACAGATCCTCTTCA Gene GeneID:515666|LOC515666:XM_002693591:66_cdna Constitutive 0 NULL GeneID:515666 15 GENE LOC515666 NULL similar to olfactory receptor MOR232-3 EMBV3_16507 CCTAAGAGGCTGCACAGCATCCACACCGCCATTCCATCGTCTTCTGGGTCAACTGTTAAT Gene GeneID:533746|DPYSL2:NM_001076000:1_cdna Constitutive 2 NULL GeneID:533746 8 GENE DPYSL2 CRMP-2 DRP-2 TOAD-64 dihydropyrimidinase-like 2 EMBV3_34603 GGAGAGGGGGGTAGGGATCATATATTGGGCTACGGGAAGAAAAGCTAATAAATAGGCTGG Gene GeneID:780785|C3orf57:NM_001110774:176_cdna UTR3_Alt 1 NULL GeneID:780785 1 GENE C3orf57 MGC139700 small subunit of serine palmitoyltransferase B EMBV3_38528 CTCCAGACATCTACCTAATTGATTGGATCTTCACTCTCTACAGCAAGTCCCTGCCCCTCG Gene GeneID:618286|TBC1D14:NM_001099176:47_cdna UTR3_Alt 2 NULL GeneID:618286 6 GENE TBC1D14 MGC155085 TBC1 domain family, member 14 EMBV3_09358 TTCAGTTCCATCTCCTGAGCCTTGAATATCTGTGTTTTGCCTGGGTTGCCCGTCTGTACC Gene BVV0101_056433 + 0 NULL GK000012.2:9845041-10497213 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03005 AAGGCCAAGTACGAACGGGCACTGAAAATTGAGATGGATAAACAGCAGCTAAGGGCTGGG Gene GeneID:540199|WNT8A:XM_002689196:72_cdna Constitutive 0 NULL GeneID:540199 7 GENE WNT8A NULL wingless-type MMTV integration site family, member 8A EMBV3_30587 GCCCTTGGGTGCTCAAGGTCCACTTGCATTGTTTGGTGCTTAAATGCTTAACTACTGAAA Gene GeneID:782436|LAGE3:XM_002699730:158_cdna Constitutive 0 NULL GeneID:782436 X GENE LAGE3 NULL L antigen family, member 3 EMBV3_37340 CACCTGTGGGGGAACTTCAGTACTTCTTATATCTTCCCAATGCTTCTGACCTCAGGGATG Gene GeneID:537669|BTD:NM_001102206:20_cdna Constitutive 1 NULL GeneID:537669 1 GENE BTD Biotinase MGC159696 biotinidase EMBV3_33314 CTCACAAGTCCTTTGTTTCTTTTTAAGCGGAACAGCACACTGCTCCCAGGAATTGGGGTC Gene GeneID:514135|BCO2:NM_001101987:77_cdna Constitutive 0 NULL GeneID:514135 15 GENE BCO2 BCDO2 MGC179481 beta-carotene oxygenase 2 EMBV3_38078 GCTGCAGAGGAACAGAAGGCAATGTCTCAGCCGATTATCAAGCATTAAAGCAGTGGCTGC Gene GeneID:508289|LOC508289:XM_002690658:213_cdna Constitutive 0 NULL GeneID:508289 10 GENE LOC508289 NULL similar to olfactory receptor, family 6, subfamily S, member 1 EMBV3_16295 TGGTTATCAGCAGAACTATAAGGATGTTATATCATGACATTTTTAGCAGGGTCCATCATG Gene GeneID:493709|ATP5S:NM_001007812:34_cdna Constitutive 2 NULL GeneID:493709 10 GENE ATP5S MGC133848 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) EMBV3_30002 CTTTGTTCCATTCCCGGTTTACTGTCATTGATCGGGTACCACCATTAACTTTGACGTGAC Gene BVV0102_188911 - 0 NULL GK000001.2:90606062-91626072 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001504 TCONS_00001508 TCONS_00001515 TCONS_00001507 TCONS_00001510 TCONS_00001503 TCONS_00001506 TCONS_00001511 TCONS_00001514 TCONS_00001509 TCONS_00001513 TCONS_00001512 TCONS_00001505 1 XLOC_000375 Coding TCONS_00001507 XLOC_000375 Coding Coding TBL1XR1 1:90477673-90609778 j TSS776 6961 1 TCONS_00001507_3 514 0.008763108748743 17 0.947435353963544 0.00360955249141085 0.00240055218593388 0.00300939178748826 0.00243291074928985 0.00286848481770734 0.00103017066688355 0.00270194143440039 0.00271371272948999 0.0063196629044993 0.00124178602426163 0.000164040310034525 0.000116692560866866 0.00147555710772231 0.000613665189196904 0.00222743235639538 0.00206707666773356 1.894481602284e-05 0.00298351008714186 0.00181915883323366 0.00256953381482604 0.000669542387361722 7.97102699717565e-06 2.31588359683643e-41 4.34806660886663e-13 0.00505026438817971 0.00312403308612895 0.00255348412058274 6.96890684154761e-12 4.54573410753354e-15 4.62497991301705e-05 XM_005201667.1 TBL1XR1 PREDICTED: Bos taurus transducin (beta)-like 1 X-linked receptor 1 (TBL1XR1), transcript variant X2, mRNA. 0.0 1.209e+04 100.00 0.96279270219796 XM_005247772.1 TBL1XR1 PREDICTED: Homo sapiens transducin (beta)-like 1 X-linked receptor 1 (TBL1XR1), transcript variant X2, mRNA. 0.0 8845 90.71 0.922424938945554 TCONS_00001507_3 sp|Q9BZK7|TBL1R_HUMAN TBL1R_HUMAN F-box-like/WD repeat-containing protein TBL1XR1; 0.0 1060 99.22 0.998054474708171 3 coding 0 0 1 0 0.371211151562742 0.388786443889475 -0.0246929011245183 0.642840441932399 TCATTTCAGGGGGACCTTGGGCTGGAGAAGAGAGAGATACATCTATTTCAGTCCACTGCCTCCGACTGTAATTGGCCAATTTGTGACTAATTTTTAAAGCTTCAGCAACAGCAACTTGTGATTGGCGGTACCAGATACTCAGTTGTACATCCCCACATCAATGCACTGCCAATGATGAGGAAACTGAGGCCTTGGACTAGAACAGAAGTCTTCTGACTGAGTCCAGGACTCTTTCTGTTACGTCATGCTGCCCGATGTTTGTTTCTGGAACTCAGCAACATCACATACAGGGGTTATATCCTGTGTTGTGACCTCATGGTTTAAGTGGGAATAAAGATGAGTATAAGCAGTGATGAGGTCAACTTCTTGGTATATAGATACTTGCAAGAGTCAGGATTTTCTCATTCAGCGTTCACCTTCGGTATAGAAAGCCATATCAGTCAGTCCAACATTAATGGTGCCCTCGTCCCACCTGCTGCATTGATTTCTATCATCCAGAAAGGTCTACAGTATGTAGAGGCAGAAGTTAGTATTAATGAGGATGGTACCTTGTTTGATGGTCGACCAATAGAGTCCCTGTCACTGATAGATGCCGTAATGCCTGATGTAGTACAAACAAGACAACAAGCTTATAGAGATAAACTTGCACAGCAACAAGCAGCAGCTGCTGCAGCTGCTGCAGCTGCGACAAACCAACAAGGATCTGCAAAAAATGGAGAAAACACAGCAAATGGGGAGGAGAATGGAGCACATACTATAGCAAATAATCATACTGATATGATGGAAGTGGATGGGGATGTTGAAATCCCTCCTAATAAAGCAGTTGTGTTACGGGGCCATGAATCTGAAGTTTTCATCTGTGCCTGGAACCCCGTTAGTGATCTCTTGGCATCAGGGTCTGGAGACTCAACAGCAAGAATATGGAATCTTAGTGAAAACAGCACGAGTGGCTCCACACAGTTGGTGCTTAGACATTGTATACGAGAAGGAGGGCAAGACGTCCCAAGCAACAAGGATGTGACGTCGCTAGATTGGAATAGTGAAGGTACACTTCTAGCAACTGGTTCTTATGATGGGTTTGCCAGAATATGGACTAAAGATGGTAACCTTGCTAGCACTTTGGGGCAGCATAAAGGCCCCATATTTGCATTAAAATGGAATAAGAAAGGAAATTTCATCCTAAGTGCTGGAGTAGACAAGACTACAATTATTTGGGATGCACATACTGGTGAAGCCAAGCAACTATTTCCTTTTCATTCAGCACCAGCATTGGATGTCGACTGGCAGAGCAACAACACTTTTGCTTCTTGCAGTACAGATATGTGCATTCATGTCTGTAAATTAGGACAAGACAGACCTATTAAAACATTCCAGGGACACACGAATGAAGTAAACGCTATCAAATGGGACCCAACTGGCAATCTCCTGGCATCCTGTTCTGATGACATGACCTTGAAGATATGGAGTATGAAACAAGACAACTGTGTCCATGATTTGCAAGCACATAATAAAGAAATTTATACTATCAAATGGAGTCCAACAGGGCCAGGGACAAGCAATCCAAATGCCAATCTTATGTTAGCAAGTGCATCCTTTGATTCTACTGTTAGATTATGGGATGTAGACCGAGGAATTTGCATCCATACTTTGACAAAACACCAAGAGCCTGTGTACAGTGTAGCTTTCAGTCCTGATGGCAGGTATCTGGCGAGTGGTTCTTTTGACAAGTGTGTGCACATCTGGAACACACAGACAGGTGCTCTAGTTCACAGCTATAGGGGAACAGGTGGAATTTTTGAAGTTTGTTGGAATGCAGCAGGAGACAAGGTTGGAGCCAGTGCATCAGATGGTTCAGTTTGTGTATTAGACCTTCGGAAATAGCGCTACTAGTTGGAAGCCATGGACCGACTATGAATGTGTATATAGCCAAAATGACTGTCCCCGACCCAAGTACTGCTATAGTCCCACTTGAACCATGGCCAGTCCACTACAGCCAAATCTAAGAGAAATATATACATACAGTGTATATAAACAAAATTGCACCCTGAAGATGACAGAATTTTGTCACAGCTTGTGAATTCTGTTCACCAAGTGCTGGAATCAAATCTGCTGTGCCCCTAAAATAGCATTTAGAAGTTTTGGATATGAAAAACAGAAGAGAGAAAAAATATGCGTTATAAAAGCAGCCCATACATGTACCAGTTTTTGGATACTAATGACAGCCTTGTTTATCCCCTTTGAATCAGCAGACACCATGGATTATATTCTTTTTTCCCTTCAGTAGTTTAGCAGTTTGTATGTACAGAGAAAACGGACTTACAAAAACTTGCAGCAGTAGTTTGTTCTTGCTTTTAAACTTTTTTTGGTTTAGTTTATGGATGCATGAAGTAAGGGAGTGAATCAGTTTCTTGTTTATATTTTTTTTCACCTTTTAAACAAAAAAATTCTTAAAAATATTTTAATGCATTCTTTTGAAGAGATAGATGTTTGGTACATTTATGGCTCCCAGAGCATATATTCAATTGGTGCATGTCGTAGAAGGGGAAATTGGAAATTAAATGGAACTATATGACTTTGGTCATGTCAATCTGTAAGACACATCAGTAAAAGGGTATTATGCTCTGTTTTTTGTTTTTGCTTTTGCTTTGTTTTTCTGTTGTGGGGTTTTTCTGTTTTGTTTTGTTTTTTTTGGTGATGTGGCTTAAATGCAATAGTTTCTTTTTTGGGGACATATTTCTGCCAATTAAAGACTAGAAGGGCACAAAAATTTTTTTAATACCATAGAGAAGATGCATAAAAATATCTTCTGATGTTTTGTAGCCATAACTAAATTATGGTTAAAAATGTGCACTATTGTGAAAAGGAGCAAAGTAGGTTTGGGTTTTTTTTTTGTTGTTTGTTTCTTTTACTTTGTTTTTTAAGAGATTAAAATGTTTCTGGATAAGGAGTAGCTTCTCCAAAGTGTCCATCATTCTGTGTAGAAGCTTAAATATGTAATGTAACCAAACTCCAGTATTAAAATCTCTCATGTTATTTTTCTTTATACAAAGCAAGATAACGGCATATAACACTGCCATTACATGGCAAAATGTTTGCTACCTTAGTTTAAAAACAATCTTTAAAACAAAAGACTTGCTTCAAGGTGTTCTTAAATAGCAGTGATTCAAAAATTTTTAAAAAGGTATAATTGCACTAACCGCCCGGCTGCTCTGATTCTGCGTTTGTGGTACTTGTGACTACATTTTCTCAAATATAGATAGATTTAAGCTGCTATGTTTTGTTTTTTTAGTAATCACTACTATATCATGTCTTTTACTCTGTTTATAATATCATGTATTTTCTTAAAGGTATAGGTATCAGATCAAACCTCTTGTGCTCATGCAACTAAAAGCTAAAATATACAGAATTTACAAATGATAGCATGGGGCTATGTTTATATGTGTGATTAACAGGGTTTGTCATGATCAATGTAATAATTCAGAAGTGTCAGTTTTGAAGAGAATAGTTGTCAAATTTAATATCGCAAAAATTTTAATTAAGGAATATCATTTATTATCAAGCTTAGCAAATTTATAACACTATTTCTGTCACTAATTATTTGAAGCTTTTACTGCTAAAATTTTAACCTATGTTTTAAGTAGAAACTGATTTAACCCTAATAATGCAGCTTTGATTTTCAGCATTTGTTGTTTTGCTATTTTTACAAAACAGCATTGATTGAAGCAAGTCTTGGTTTTACTAAGGTAGGATAGCATTTGCTATTGGTAAAGAGAATAAATACACTTAATTTCACAATACATTGTTACATGTACCCCAGTTGTTGTTAGTGGGGTCTAAGATACTGTAATAATATTTTTTAAAATTTACATCCAGAGAGGCAGTCATTCATGATGGTTTTGTGCCAGCTGTTTTTAGGGTTTTGGATCACATTATAGATATTTAGAACTATTACCCTGTGACTTACGTAGGAAACCTAATACGCTGAGTATCTGGCACTTGAAATCCTGCTTTTATTGCTGGAGGTCCACATCTGTGGTTGACCTCTGTTGTTGTTTTAAAAAAAAATAAATAAAAATTTAAAAATCTGTGCAATAATTTTTAAATGTGCTCCCAGGAATAGACACAAATGTTTTGAGTATGTTTAAGCTGCATTTTCCTTTAGTGATGCATTTGTCAATTGCACTGAATTTAAATCTGAAAGTCAGAGGTGGTTATTGATAGTACTTTTTGTATTTTGATATGGACAATTTATTCATTTGCATACAGTTATTGACCTTTTTTCCCCAGCTGATTAAAGATAGTCATGAAGTTCTGCAGTATAGCTGCCAAAATCGACAGCTACATGTTTATGGTGTTGTCATCGTCTCTGTGTTTTTTTGTTTGTGTGTTTGTTTGATCTTTAGGTATTTTACTAAGCATAATAGCCACAGTAGGGCATATAAAAGATTATAAATACAGAGCTTTATTATCCTGAAGTCTTGGGTCTTTTAAGTATAAACTCTCAGAAAGGTATCCATTTTGTAGGCTTGGGTTCTTTGTGAGCATACAGTTATTTCTTTTTTGCTGCTGTTCTCAACATCATCATTGCCTGCTGATGTGCCACGATGCTGCTCCAGTAGACAAAAGTAAGATTGCCTCTAATTTGAGCAGTAACATGATTATAAGAGACCAAGTTTCACAGCCTGTAAAGTTCTATATTTGAAGTTCTTGCTTATTTTTTCCTTCCTTTTTTTTTTTTTTTTCTTTTTGCCCCCTCTAAGAACTTATCTGAAGATCTGTTGATTCCAGTAGATTTTCTGTGGTGTTCATTATATGTCATTGTTGTATAGGCTACTGTAAGACACTTATAAGGAAAAATAGAAAGGAAAACTTAAATGAATAGAATACTTATTGATTAAAATACAGTAAAGAAAGAGCAGCTGTCATTCTTGAACATCATAAAGGAATATCTTTTTTCTTCTTCATGTAGGATATCCCGTAAATTCTTATCTTTGTTCCATTCCCGGTTTACTGTCATTGATCGGGTACCACCATTAACTTTGACGTGACTTTTAGAAGTGATAACTTTTAATTTCCTAATAGGTCTTAGGGTGTACTGAATTCTGTTTTAATTAATTATTCTCTAGGTAAGTATGTTTTAGGATTAAACACCTTTTACAGATACTGAAAGTGCCTCCTTTTGTGGTGTAAAAAACAAATTATGGTGCAAAAAGTAATCATTAGGTTGAATTACATGAAGGTTTTTTGCTTTTTGACATATAGAAATGTCAAGAGAAAGGCCAAAGATTTGTACTTTTTCACTTAACTTATAAAGCACTCCTTTTTTCCTTAAACTTACTTCTGTCAAATTAGATTTAATGAGAGAGTACTATTTTTAAGGAGCTATCTGTTTATGTAGAATGATTTTGTTAAGAGTTATGTAAACTATTACTGAATAGAGGCCTGAAGAGGAGTATGCATTTTTGCTGTTTAAAGGAATCAGAAATGACTGTTCTTATGTCAGCAAAGATGTTAAGTTTTACTAGATAAGCAGAAAAAATAAATCTCAAATGCAGTGCTATTTACTCTTTTCAAAACAGTTTTCATTTTCTTAAGCACACTGTACATTTCTGTAGAACCTGCATTTTTTCTTGCACGCTAAAAACGGTACTTGCGTCTGGTGAATTACTGTTGACAGTTTCCACAGAAACCCTGTTTCAGTGGACCAACATTGTGGCATGGCAGCAAATGCCAGCATTTTGGGGAATAGCAGCAAATCTACAAGAGACCCTGGTTGTTTTTTTTTGTTTGTTTGTTTTTCTTCTGAATCAGCAGGGATGGAAGGGGAGTAGGGAAGTTATGAATTACTCCTTCCGGTAATAGCTCTGACGTGTCACATTCAATATCAATTTAAAAAAAAAAAAAAACATGAATCTAGTTAAATGTAGAAGAGAGAGCGAAAAAAGAGGAAGTGTTCACTTTTTTAATACACTGATTTAGAAATTTGATGTCTTATATCAGTAGTTCTGAAGTATTAATAGCATTCTTTATTTCTGCCTTTATGTTGACAGTGTTGAAGCAGGGTGAATAACTCGGGCATATGTATTTTTTTTTAAATTTTCTCGTAATCTGTTTCATGATGTTTTCTTTGGAGTTTATGGATAAGTTCAAGAAAACATTCTGCATGTTGTATCTAGTCTAATGTACTTATCCATCTCATCAAAAACACGCAGACTGCATTTCGTAGCTCTGTAATCCCTAAATACAGAAGTAATTTTCTTCTTTCCTGACTTCGACATTGTAGCTATAATGTTCTAATTTTTGATTTCTACAAATCCTTTGGGTCTAATTCTGTGAGCCTACTTATAGCACTGGATTAAAATGTCTGCATCATTTCTTTAGTTATCCAGTTAACTTTAAAACTGTTGTAAAAGTGTAAACCAGCCCATGACAGTCTTTTGTACATGTTGAAGAACTTTGTTGTTCAGTTTTCATGACTGTTGTGTAAGGAAGACTGATACAGATACTCTATGCTGTCCTGGACCATGTTAATTACACTTGCGATGTATTTTGGTTCCACATCACAATGATTTGTCCCCAATGACCCTTTTATCCTTTCTAGGCACATTTTTTGTTGTTGTTGTTGCAGTTTCCCTTTGCATTGTATTGCTTTGACAACTGTAATTTGAATCAGATCTGAAAGAGGTCCAGAATAAAATATATTTTGATATTATGTTGGCTGTGTACATATATAAAACCTTTGATACCTATGTAGTTTGTATGGACTATTTCCTAGTCAAGTAAAGGGAAAGGGATGCTCTTGTTTACAATTTCTTGTTTACATTTTATTGCAATTACTCCTCTGATGTTCTTTTGTAGAATAAAGTTTTTTTGCTCTGAGTTAGCCTTCATAACATAGAACATCATGTTGCTTCTCCCATGCTAATGTTACCAATCATAACAACTGCCATCAGAATCCAAA EMBV3_21677 AACTAGAAGTGTGCCAGCTTCAAAAACCCGATGTGGTGGGTATCAGGAGGCAGCGGCTTA Gene GeneID:520088|MELK:NM_001111260:13_cdna Constitutive 0 NULL GeneID:520088 8 GENE MELK NULL maternal embryonic leucine zipper kinase EMBV3_23344 CTTCTCACGCTGCAGAACATCCACTCCAAGCTCCAGGCCTGTGTCCCAGCTCAGCCCACA Gene GeneID:100298583|LOC100298583:XM_002695051:389_cdna Constitutive 0 NULL GeneID:100298583 18 GENE LOC100298583 NULL hypothetical protein LOC100298583 EMBV3_00295 GGGTAGTGCCTACACCTTGGCGGGGAGCCAGCATTTCTTCAATGATTACAAGGCCAATGA Gene GeneID:787763|GRXCR2:XM_002689277:8_cdna Constitutive 0 NULL GeneID:787763 7 GENE GRXCR2 NULL glutaredoxin, cysteine rich 2 EMBV3_12288 GGCCACCGCCGGCAGGCTGCTCTACGACATGTTTATTTGAAACTCTTCCTGGGCGAATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07053 ACTGTCCCTGGGGTCACAAAGAGTCGCACATGACTGAGCTACTAACACACCTAGAACTCT Gene BVV0102_243393 + 0 NULL GK000023.2:22261584-22330802 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00705 AGCATACGCTGCGGGTGCTGGATATGACGGGCCTGCGCCGCGTGGACTTGCGCTTCAACA Variant GeneID:539952|LRRC14:NM_001102379:122_cdna 531^830 1 EMBV3_32333 GeneID:539952 14 GENE LRRC14 KIAA0014 MGC159994 leucine rich repeat containing 14 EMBV3_08894 AGGCAGGATGAGCAGCTACAGAAGACAAAAGCCAAAGATGTCTCCCGCATGCGTTCTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39930 CCTCTTCAGAATCCACCATGGCCAGAGAGGAGCCGGGGAGCCTAGACCTGACTTGGAAGT Gene GeneID:784903|LOC784903:XM_002696677:320_cdna Constitutive 0 NULL GeneID:784903 21 GENE LOC784903 NULL similar to Uncharacterized protein C15orf39 EMBV3_07943 GAGCGGTAGCGGCTGCATCGGGAGGAGCAGGTTGCAGTTGTTCTGATGGACACCCAGGGG Variant GeneID:515124|ATL3:NM_001098978:9_cdna 250^608 1 EMBV3_13187 GeneID:515124 29 GENE ATL3 MGC152382 atlastin GTPase 3 EMBV3_21069 TACACCAGGAAAGATGAGAGCAGGGACACTTAAGGAGATCTGCCATGTTCAGAAGTGCTC Gene BVV0102_439654 + 0 NULL GK000015.2:51101824-51312696 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059475 1 XLOC_036427 Coding TCONS_00059475 XLOC_036427 NonCoding Coding - 15:51302648-51306630 - TSS44631 3982 1 TCONS_00059475_1 94 0.116022099447514 1 0 0.000446163210043782 0.000334507439553077 0.000566880732917348 0.000263442268624117 0.000421149434765596 0.000166959563273336 0.000332827154242246 0.000125260949230904 0.000211302846570871 0 0 0 3.23002315025906e-48 1.25712422439309e-06 2.61029600570517e-05 0 0 0 0.000163747890292005 0.000156449357704569 4.82550292964612e-05 0 0 0 8.93220979027538e-05 6.92124552601474e-05 6.37607283031457e-05 0 0 0 NM_001192736.1 GLA Bos taurus galactosidase, alpha (GLA), mRNA. 2e-162 578 88.52 0.113008538422903 0 noncoding 0 0 0 0 -0.0255810697293075 0.863811290397046 -0.032390583539324 0.638599517360795 CTGCAGACTGAGGTGGTAGGCGAATCAATTCTGAGTACTAGTTGGAGCCCCTGGACGTTCTCAAATATAGATTCTCTTTACTGTCAGTTTCTGTTTCTACTTTTCTGTTTCTGCCTCCTTTGAGAGACAGTGAATTTCCTGTTTCTTGGCTATGAGAGAAAGATGAGCAAAATGAATACGGTGTCTAGGTTTTAGGCATTCTTCCTTTCATCTATCTCATGATCACAAAATATTTACAAGAAGTCAAGACTTGGGTTTTTTTTTTTCACTGATGAGAAAGAGAAAGTTTGTACTGAGTTGAAGAAATGCTTTGGCTGATCAAATACTGGAAACTACCTCTTCAGGTACTTTACCAACAAAGGTCCATCTAGTCAAAGCTATGGTTTTTGCAGTAGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGTTGAGTGCCAAAGAGTTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGAGTGCAAGGAAATCCAACCAGTCTGTCCTAAAGGAGATCAGTCCTAAATATTCATTGGAAGGGCTGATGCTGAAGCTCCAATACTTTGGCCACCTGATGCGAAGAACTGACTCACTAGAAAAGACCCTGATGCTGGAAAAGATTGAAGGCAGGAGGAAAAGGGAATGACAGGGGATGAGATGGTTGGATGGCATCACCGATGCAATGGACATGAGGTTGAGTAGGCTCCAGGAGTTGGTGATGGACAGAGAGGCCTGGCATGCTGAAGTCCATGGGGTCACAAAGCCAGACACAACTGAGCAACTAAGTTGAACCTCTTCAGGTGGAGTTCTTTCCTCCTACCCCTGCTTCCTTTACTTGGCTTCTTGTGGGCTTTTGGAAAATCTGGGACTGGAAATAACTCTCAAAAATGATGCTAGCGAAGGGCTGGGCTGTGAACACTAATCCTGCTTTCATCAGAAAGGGCATGCTAATTATGTTTGGCATCCCTTACAGTGGAAGGCTGCAAGAAGGACCTTCTCTGGTTGCCTCAAGCTTTGGTTCTATAACTCTAGCCTAGTCTCTTAAAACTAACTGCACCATTCCTGACAAAGGCACCTTATGGGCTACTTCTCTCCTGACTCACTAGATAGCACATCAGAGGGAAACGCCTTATGAATACAGCCTGTTGTCCTCCTGGTGCTTTCACCAGGCTTGCTTTATAGCTACCTGCTACCCCAAAAGCCACCCAAAGCTTTCAGGAAGGACTCCCTGTCTAGTCCATTTTGTTTCATGGACATTTATCCTGTCTGAGATACATTTTCTAAAAAAAATCCTTTTCCAGACAGCAGGGCCATTCTCAAATTTAAGCTTTTCTGATTTTCTCCATTCCCCTTAATCAGCCTCTTTCTTGGGGAGCTTGAAATCTGGGAGATACTCTGATGTTTCTCTTGCCGGAATTTGAGGCAAGACCCACAGCTAGGAAAGGACTCTGGGGGAGAGACTGTATCAACCCATAATGCCCTCATATCCCCACTGTTTAGCTTTCTTACTTTACCTTTTGAGCTCTTAACTTGCTGTTTTCGTCTTCATAGAAGCAAGTGGTTTTTTGGCCCCCTAGCTATTACAGTCTTCAAAAGTCCTTGAAATAGTCTTATCTCCTATGTCCCTAGGATTTTAGGCTAGCATTCATCGTAACAGCACTGCTGAAATCAATCTGCAGCTTTCTTATGGGACCCCAGACCCTAAAGTTGCCTTTCATACTTCATGTCCAAACTACAGATCTTTAAATTCAAGAATCTCTACATCCAGAACTCATTTTCTGGCAGGGTTTGCTGATGTTCCTCAGCCTGCAGTAGAGTCTTATTAATGTCATAATTGACTTGAGCTACAAGATCCCTGTAAGGTGTGTAGGCTGGAGGGTGGAATTGGAGCATTACATGGGGTTGTGACACTGACCCTAGAAGGTTTCCTCCTTCCCTCACACTACTTCTGAGAGGAAAATGATCTTGACAGTTGAGATGCCAAGAAATGCTTCAAGACTGTTAATAGGTGAAATTTAAGGGCTCTTTTGATAGTATTTACTTTCCTGTTGCTTAACTTGGATTCAAAGTTTTTTCCTTTGTGAGTAGTTATCCTGCTTTGGAGCTGAGCTATCATAATTTGAAAGATCATAGATGCTCATCACTTACTAACAAGACTGTTAACCCAACATGACCTCACCTGTAGCTGGCTTCCTTGAGTGACCTTGTCTTCTTCTGTGTAGAATGTTATTTTTCCTATCAGGAGCCATCAGAACACAAAGCAGAATCTATCCCTTAGAATCTTGCTTCTATCAATTATTACAGAATTTTTAACTCAAAACTGTCATAGGGCAGACCAACCACCCAGTAACAATCCTAGTTAATGTGGTGGAAGTGGCAGCCATCATACTGCATGGGGGTGATGGTCAAAACTTGGATCAAAGGATAAGGAATTTACACCAGGAAAGATGAGAGCAGGGACACTTAAGGAGATCTGCCATGTTCAGAAGTGCTCCTTACAGTAGACTGACACAGGTGTTTGTAGCCTCAAGGACATCCTTTCAGGAATACAACAGTGCTAAGGAAGCAGGAGTTACTGCTCAACCTAATGGGTATCTTCAACAGCTGGTATCTAGACATAATGTTAAATCCCAGTGGAGAGCTTTTTAGTCCCTGTTTTGCTAACAGTATTGCCTTGAACTTATTTTGTCCCAAAGGAACTAGAGGTTAATGGTGCAGTGGTGATCACAAGATTTATGAGCCTGGATGGTGGTTTTGCCAACTGAAGACCAACTCAGATCACCTGGGAGCTTTCTGTTAATGGTTATTGATGGCTCCTGAGATTGTATTCAACTTCAATTTTAAGCAGTCTTACACTTAGCTTCTGTCAGACCAGACAGGTAATCCAGGTCAGAGCAGGGGATAATTTTTATCCCTCAGAAAAGGAGATGGCAGAGTAACTGCACCTTCAGTTTGCTCATAACACTTGGTTTTGTCATTTGTCACGGAGGATTCCAAGCCCCCATATGGGGCTTCCCCAGGATTTGCACGTCCTGTATTTGTATCAAGTATTGAGTAGATCTGGGTAGAAAGCAATTCTCTTTGGGAACAGGAAAGTTTGGATTCACTGCACAAGTTTTACTTAAGGCCTTTCTGCAGTGAAATACCTGCATTTCCTGTACACCTTACTAATGATGGCAGCTCACAGAACTTTCATAAACTCATCCTTTATAATACATCTGCAAACATGCTTGGTTTCCAGCTGTATTGAATTGTAATAGGCAGTAAAAAAAAAAAGTCATAAGGCAAGTTATTACCTTGTTTCTTGTTCCTATAATCAGACTTCAGAATGACTGCCCACCTCTGAGTTCTTTATAGAGGTGGTGGCATCAACAGCCAGAAAAAGTTGAGGGTAATGTATCTTAATAAGGTTTTAATGCAAACTCAGTACATGCTTTTTCCTTCTGGATGCTGTTACTTGGAGTTGTTTCTTAGATAGCAAAGTTTGCAACATCTCTCTCATCTCCTTCAAAACTTCTTGAACCACCACTGCAGTTCCTGGGCCAAATGTGTTGATGTTTCAAGTTGTCTCAGCTGCTTTATGACCCATTTTGAACTTGAACAAGAGAATTGCTCAAATCAGAAAAAATTGCTCAAATTTGCTTTTTAACATTTACCTAGTCTAAAATATAAATTGCAAGTAATAAGTTGTTATCCAAAAAAAAAAAAAAGCAAAAAATGCACATTAAAATGATTTAACATAACCACATATAAAAATGTAATCCAATATCAAAGGCAAATTTCAACAATGTAAATACCACAATTATTTTGCACCAACCTACTAGGTCTAGGGGTTTCCCTGGGAGATCCCAGAGGTGGGGACTGTTCTCCCTAGGAAAGAAAAAATAATTAGTGTGGAGAAGCATGAGGCCTAGATGAATACTTGCCCAAAGAAATGTCCTTACTCAGAGTCCAGAGCTACTGG TCONS_00059479 s 5' 6067 TCONS_00059479 s 5' 10048 EMBV3_22089 TGAGGATCCACAGCAAAGGACATTTTCAGGCGAGTTGAAGAATTTCTCAGCAAAGATATC Variant GeneID:510916|DBF4:NM_001075476:14_cdna 262^434 1 EMBV3_21329 GeneID:510916 4 GENE DBF4 MGC139071 DBF4 homolog (S. cerevisiae) EMBV3_12338 ACTGTTTTCTGAGCATCTGAAGTCACTGTGTTTGGCTGGTGTGTTGGGTGAAGTGTGGGG Gene GeneID:534297|METRNL:XM_002696106:183_cdna Constitutive 5 NULL GeneID:534297 19 GENE METRNL NULL meteorin, glial cell differentiation regulator-like EMBV3_22383 TTATTTTCCAGGCACAGATCTAAGACCCAAAGGGGTGGGGGGAAAACACAAGCCCCTTGA Gene GeneID:533107|FADS1:XM_002699285:216_cdna Constitutive 1 NULL GeneID:533107 29 GENE FADS1 NULL fatty acid desaturase 1 EMBV3_38244 AAGTGGAGTGAGCCCAGGAGAGCTCCACCAGCAAAGGCATCCCAGGAAACTGTTAGAAAA Gene GeneID:524459|RNF185:NM_001083703:65_cdna Constitutive 0 NULL GeneID:524459 17 GENE RNF185 MGC139038 ring finger protein 185 EMBV3_12407 CACCATTTAATTCTGGGCCACCCTAAAGGATGACACCCAGCTTCAGAGACCTCCTCTTGG Gene BVT0102_131938 + 0 NULL GK000023.2:39884070-40588547 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133422 TCONS_00133429 1 XLOC_081110 Coding TCONS_00133429 XLOC_081110 NonCoding Coding LOC100335353 23:40202335-40219583 j TSS99651 1078 2 0.937612338377689 0.00140932804479609 0.00362138461327171 0.00104862297527615 0.000588602675632747 0.000620170629890939 0.000246252809542372 0.00236248812065985 9.75745868169468e-05 0.000313305615884266 0 0 0 8.86572958783453e-85 6.96634786034963e-05 0.00016843903024662 2.42619180485338e-94 0 0 0.0027145674640668 0.0047639347524532 0.000556780913150533 0 0 0 0.00141109488042753 0.000592660778110876 0.00104825399969583 0 9.9139697986307e-181 0 XM_005223827.1 ATXN1 PREDICTED: Bos taurus ataxin 1 (ATXN1), transcript variant X5, 9e-53 212 100.00 0.10760667903525 NM_000332.3 ATXN1 Homo sapiens ataxin 1 (ATXN1), transcript variant 1, mRNA. 9e-15 86.0 80.00 0.0871985157699443 0 noncoding 1 0 0 0 -0.546599113127182 0.0507229560803322 0.0299355654441529 0.579560537809621 GGAGAGACCAAGCTTTTAATTTGATTGAAGGGATGACCTTTTTGTGTGTTGGCCTCCCTCCGAGCCCTGTTGAATCAAACCAGATCTGCCTTTTAAGCTGGCTGGTGCCTGTGTAATTCTCATAAAACGATGCAAAATTTGATGTTCTTAAAGTTTAGATTTCCCTGCATGGTGTCTTCAGGTGGAATTATTTTTTAAAGCCATTCGTGCTGTTTCTCATTTTGGATTTCCTCTTCTGCACCCCCTTGACCACTGCAGGAGGAGCCGGCTGCAAATCACCGAGGTGTTCCATTCAAGCTGCAGATTTGTCTGTCGTCTTTGGACAGCAGTCTCTTCCTCCACGGCTGCTTTGGGGGAGTCCAACACCCATCGGGTCACAGAGAGTGCTGGTGGACAACTCTCCCTGCCCCAAGATCTTCGGTGGAAGTCCACGGGACTTGGTGTCTGGGCCATTCAAAGTATATATGAACTCACCAGGAGGCATAATGCGTCACCATTTAATTCTGGGCCACCCTAAAGGATGACACCCAGCTTCAGAGACCTCCTCTTGGACATCATCTCTGAGATCCAGGGTTTTAGCTCCCCACTGTCTGAAATCTGTTTCTGACTGAGTTTGAGCTGCCCCGGCTTTAGGCATTCAGTGGCCAGGACCACGTGGCAGCGACTCACCGTATGTCGCTTTCAGAGCAGCAACTCCTTCTGAGCACTTATTGAGTCTTTACACAGATATGCTAGAAAACAGGCACCAACCCATTCTTTCCATCTTGGCATTTGCCCACAAGCCTAGTCCTGGGATGACCTGGCACAAAGGCAGTGGAGGATAAATTCATCTTGTACAGACTTGTTCCTGCTAGTTCTAGCCTGTCTGTCGCCACAGATCTAGCTTTTAAATCCTCAAGTGATTGGTTTTATATAGGAATGTGAGGATTGTTGGATCACAATAATTTTCTCCCTGGATGTCTAGTGTTTATACAAGCAGATGTATGCTAAAAAAAGTTCTATCATTGATGTAAACAGCAGGGCTTAATTTTAAAAGTTATGGATGCTTAAAGATGGTGCAGAATAAAAACATAAGATT EMBV3_19642 GTTCATTATCCTCCCAATTCTAAGCTACAAACTCAAGATATTGCTTACAGCCTGGTGATG Gene BVT0102_042530 - 1 EMBV3_29856 GK000012.2:25641459-25792899 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036572 TCONS_00036575 TCONS_00036573 TCONS_00036574 TCONS_00036576 1 XLOC_021180 Coding TCONS_00036574 XLOC_021180 Coding Coding NBEA 12:25791632-25963413 j TSS26594 4221 1 TCONS_00036574_7 760 19 0.97553847945046 0.000904659714283743 0.000720686120379545 0.000256067352924234 0.000561631188205296 0.000445579235562099 6.67390402891494e-05 0.000397062043917864 0.000277035558611621 0.00100200466046694 3.08476728528498e-05 2.26601655787766e-08 3.18626979337349e-06 5.25014279953743e-15 0.000268512381192195 0.000110869440877232 5.14004088295319e-10 5.74787898479826e-11 4.6950608343544e-10 0.00106885741620175 5.98633237954953e-08 1.043248683478e-08 6.49838102960116e-11 1.26885939509685e-10 1.51439507657779e-10 0.000827778930747208 0.000468965231627182 0.000374333943459587 1.19261825985966e-10 1.05790062149773e-08 5.39450547206536e-10 XM_005194130.1 NBEA PREDICTED: Bos taurus neurobeachin (NBEA), transcript variant X2, 0.0 5025 99.47 0.667614309405354 XM_005266347.1 NBEA PREDICTED: Homo sapiens neurobeachin (NBEA), transcript variant X2, 0.0 6046 92.94 0.96470030798389 TCONS_00036574_7 sp|Q8NFP9|NBEA_HUMAN NBEA_HUMAN Neurobeachin; 0.0 1559 96.97 0.998684210526316 3 coding 1 1 0 0 -0.337877126193241 0.134257472302709 -0.023014292272937 0.70373199881946 ATTAAGGAGACTTTACACTTCATGTTTGCATCATTAGCCAAGACTGTTGTGTGAGGGCAAGGCTGTGTGTCAGGGTGGAGCAGGAAAGGCTGCAATGGGGCAGATGCGGCACCCTCACCCCACCCCGGGCTGCACCCAAGGGAAGCTCAGTCCTTGCGTACACTGAGGGACTTCATGGAAAATGGATGTTCAGCGAGATACGAGCTGTATTTTCAAGACGTTATCTTCTACAAAATACTGCTTTGGAAGTGTTTATGGCAAACCGAACTTCAGTTATGTTTAATTTCCCTGATCAAGCAACAGTAAAAAAAGTCGTCTATAGCTTGCCTCGGGTTGGAGTAGGGACCAGCTATGGTTTGCCACAAGCCAGGAGGATATCACTGGCCACTCCTCGACAGCTTTATAAATCTTCCAACATGACTCAGCGCTGGCAAAGAAGGGAAATTTCAAACTTTGAATATTTGATGTTTCTTAATACTATAGCAGGACGGACATACAATGATCTGAACCAATACCCCGTGTTTCCATGGGTATTAACAAACTATGAATCAGAAGAGCTGGATTTGACTCTTCCGGGAAACTTCAGGGATCTATCAAAGCCGATCGGTGCTTTGAACCCAAAGAGAGCTGTGTTTTATGCGGAGCGCTACGAGACCTGGGAAGATGATCAGAGTCCTCCCTACCATTACAACACACATTATTCTACGGCAACATCCACCTTATCCTGGCTTGTTCGAATCGAACCCTTCACAACCTTCTTCCTGAATGCAAATGATGGAAAATTTGACCATCCTAATCGAACATTCTCGTCCGTCGCGAGGTCTTGGAGAACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAATTCTATTACCTTCCGGAGATGTTTGTCAACAGTAATGGATATAATCTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGATGTTGATCTTCCCCCTTGGGCAAAAAAACCCGAAGACTTTGTACGAATCAACAGGATGGCCCTGGAAAGTGAATTTGTTTCTTGCCAACTCCATCAGTGGATTGACCTTGTATTTGGATACAAGCAGAGAGGACCGGAAGCAGTCCGGGCTCTGAATGTTTTTCATTACCTAACCTATGAAGGCTCTGTGAACCTGGACAGTATCACTGACCCTGTGCTGAGGGAGATTCCAGAAGCTTATTTCATTAGAGATCCCCATACGTTTCTTCTTACAAAGGACTTTATTAAGGCCATGGAGGCACAGATACAGAACTTTGGACAAACGCCATCTCAGTTGCTTATTGAGCCACATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTTCCACAGAGTCCACTCATGTTTAAAGATCAGATGCAGCAGGATGTGATCATGGTGCTGAAGTTTCCATCAAACTCCCCAGTGACGCACGTGGCGGCCAACACACTCCCCCACCTGACCATCCCTGCGGTGGTGACGGTGACCTGCAGCAGGCTGTTTGCCGTGAACCGATGGCACAACACAGTAGGCCTCAGAGGAGCTCCAGGTTACTCCTTGGACCAAGCCCATCATCTTCCCATTGAAATGGATCCACTAATTGCCAATAACTCTGGTGTGAATAAACGGCAGATCACAGACCTCGTTGACCAGAGCATACAAATCAATGCACATTGTTTTGTGGTCACGGCAGATAATCGCTATATTCTTATCTGTGGATTCTGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACAGGGAAGCTAACTCAGATTGTATTCGGCCACTGGGACGTGGTGACATGCTTGGCCAGGTCTGAGTCGTACATTGGTGGGGACTGCTACATTGTGTCTGGGTCTCGCGATGCCACCCTTCTGCTCTGGTACTGGAGCGGGCGACACCACATCATAGGGGACAACCCGAACAGCAGTGACTATCCTGCTCCAAGAGCTGTCCTCACGGGCCATGACCATGAAGTAGTCTGCGTTTCTGTCTGTGCAGAACTTGGACTTGTTATCAGTGGTGCTAAAGAGGGCCCTTGCCTCGTCCACACAATCACTGGAGATTTGCTCAGAGCCCTCGAAGGACCAGAAAACTGCTTGTTTCCACGCCTGATTTCTGTTTCCAGTGAAGGCCACTGTATCATCTACTATGAACGAGGGCGATTCAGCAATTTCAGCATCAACGGAAAACTTTTGGCTCAAATGGAGATCAACGATTCAACACGGGCCATTCTCCTGAGTAGTGATGGGCAGAACCTGGTGACCGGAGGGGACAATGGTGTGGTGGAGGTCTGGCAGGCCTGTGACTTCAAGCAGCTGTACATTTACCCTGGCTGTGATGCTGGCATTAGAGCAATGGATTTATCCCATGACCAGAGGACTCTGATCACTGGCATGGCTTCTGGTAGCATTGTAGCTTTTAATATAGATTTTAATCGGTGGCATTATGAGCATCAGAACAGATACTGAAGACAAATGAAGAACCAAAAGCCAAGTTAAAGCTGAGAGCACAAGTGCTGCATGGAAAGGCAATATCTCTGGTGGAAGAAAAACTCGTCTACATCGACCTCCGTTTGTACATTCCATCACACCCAGCAATAGCTGTACATTGTAGTCAGCAGCCATTTTACTTTGTGTGTTTTTTCACGACTGAACACCAGCTGCTACCAGGCAAGCTTATATCATGTAAATTATATGAATTAGGAGATGTTTTGGTAATTATTTCATATATTGTTGTTTATTGAGAAAAGGTGGTAGGACGTGTCACAAGAGACTTTTGACAATTCTGAGGAACCTTGTGTCCAGTTGTTACAAAGTTTAAGCTTTGAACCTAACCTGCATCCCATTTCCAGCCTCTTTTCAAGCTGAGAAGAAAAAAAAAAAAACCACGTTTGATACTTTGTACATCAGATGCATCTTATTTAAAGGGATACTTTTGTAAAAGTAAAACCTTGTATAAAGAACAAAACGTTTCTTAATTTTATTGTGGAGTTACAACTTGCATGTTCTTTAATCCCTATGTCTTGATGGAACAGGCGCACTGACAGTAGGGAATAGTAAGATCTGTCCAAGGACACCGTTTGTATGAAAGGATTGAATTTGGGCTCAATCGATAATTTTTCACATTTTCACCAAAATATAGTTTGCACTTTTTAATCTGAATTCCATCCCTCTACGTGAAATTTGCTCATAAAGCATTTGGATACTAAGCCATTATTTGCCATTTTTTGGTACTTTATACAAAGAAAATTCAGCCCTACCCTTCATAATTTGAAGACACAGCAGAAAGGGGGCTTAGGGATGAGGTCCTGGTTTTATTGTATAAATAGGAATCCCGATTGTTAGTTCCTTAGTGATGACTTCCCAACTCCTGGACAACTCTTCCAGACTCATCCTGCTGGCTTAGCGTGTGTACATTAGGGGAGGAGATCTGATGCTAACTTTTTTTTTTTTTTTTTTGCTGTTTTTTTAATTTTTCTCTCTCTTTGGTTCTTGAATAGCTTAGTTTCTTTAATAAATAAGTCAGACTTTATTATAACAATAACTGAAGTTATTCTTTTAGGTTCTTGTGAAATTCTCACCTAAAGCCACATTCTTAGCCTAAGGCAATTCATCTTTTATGATATAAAATGACGCTATCAAATGATTTTCCATACATTGTACTGATCAAGTTATACACCCAGGGGTATATACACTTTATTCATGTTTCTTCTTTGTATATTTGGTGACCGTATCGTCATAGATGTACATATTGTGTCGGTAGGGCTATGAGGCATGTTACAGGAATGTAATTTTCTCAGAACTTACACTCACTTGCAGTCATTTATTTAAAAAGATAAAACAAGATAATGGGTTCTTTGTATTGGCACTTTGCACCAGAAACATATCATTATTTATTGATGTGATTACTTATTTGTTATCCACCTTGTACTAGTAAGTTTTAGCACTGAATTCCTTCTTCATTGTTGTTTGTATTTATGAGATTCTGAAATTCTGGGGAATCGGCGTAATGATTAAGTTATTCATCACCAGGCTGTAAGCAATATCTTGAGTTTGTAGCTTAGAATTGGGAGGATAATGAACATCTGGAAGACAAGTTCATTTCATCTTGAGATCATGGTGAAATATTTTGGATATATAAATTCCTTAAGCTATTGTAACCATGTTTTATTGCAAAGATGTAAAATATGCCAGATGTGTGTGAGTTGGAAATCAAAAAAAG EMBV3_42182 GTGGAACTTGGCCCACAGCTGCCCGAAGCCGAAGCTGAAGAGAGCTCAGACGAGGAGGAG Gene GeneID:510203|PRKCDBP:NM_001083401:25_cdna Constitutive 1 NULL GeneID:510203 15 GENE PRKCDBP MGC142825 protein kinase C, delta binding protein EMBV3_38024 CCTACTTCTATTGGGTCCGTGCTGTGTTTCTTGTTAACTCTAATGGTGCTTCTCATTTTC Gene GeneID:538167|CCNYL1:XM_002685539:127_cdna Constitutive 2 NULL GeneID:538167 2 GENE CCNYL1 NULL cyclin Y-like 1 EMBV3_08991 GGTACTTTGTAGAGTGAGCATGTGCATATACATGGGAAAATGATGCCCTCTCTCACCCTC Gene GeneID:513583|IFT80:NM_001098959:127_cdna Constitutive 0 NULL GeneID:513583 1 GENE IFT80 MGC157150 intraflagellar transport 80 homolog (Chlamydomonas) EMBV3_11529 CAGAGGGTCAGGAACCGTGTCAACTTCAGGATACTGGCTCGAATACTACAGAATGAATAG Variant GeneID:613479|GTF2A2:NM_001037619:121_cdna 350^476 2 EMBV3_15672 GeneID:613479 10 GENE GTF2A2 MGC133516 general transcription factor IIA, 2, 12kDa EMBV3_22093 ATTGTGTGTTGCATGTGTGGGACAGTGGTCCCGGCTCTCCTGTGCTCGAGAAGTCAGTGT Gene GeneID:788566|STX1A:NM_001083798:347_cdna Constitutive 0 NULL GeneID:788566 25 GENE STX1A NULL syntaxin 1A (brain) EMBV3_22588 ACTGGGTGATCTCAAGTGCCTCAGTTAATGCACGTACAATATTCATTTGCTTGGTTATGC Gene GeneID:540872|TRM1L:NM_001098121:102_cdna UTR3_Alt 2 NULL GeneID:540872 16 GENE TRM1L MGC148834 TRM1-like protein EMBV3_26705 CGAACTGGTGGTTGAGTTTGTTACAGCAGCCACAGTGAAGTACCACAGACTGAGTGGCTT Gene BVT0102_145792 - 0 NULL GK000027.2:16631667-16702663 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29144 CCTGCCAGACTGTATCTTCCTGCAAAGATTGACAGCAGACAAGGAGAGCGCAGCAATTGT Gene GeneID:504509|ZAP70:XM_002691140:154_cdna UTR3_Alt 2 NULL GeneID:504509 11 GENE ZAP70 NULL zeta-chain (TCR) associated protein kinase 70kDa EMBV3_28458 CCGCGGGCCTCTCCTCCACCCCCACCAATTTGCATTTTAATGACTTGGGAAGATGAAAAG Gene BVV0102_270381 + 1 EMBV3_00708 GK000026.2:26014014-27810197 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32550 CATGTACGTGGACAACAACCGCAGCTGGTTCATGCACTGCAACTCTCACACCAACAGGAC Gene GeneID:518459|TRIM67:XM_002698784:138_cdna Constitutive 0 NULL GeneID:518459 28 GENE TRIM67 NULL tripartite motif-containing 67 EMBV3_30883 AAGCTGAGACAGCTGAGCCATGTCCTGAGGCATCTTTCTTATTTTCTTTGTGTCCACTGC Gene BVV0102_091711 + 0 NULL GK000019.2:22141272-22167560 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092679 TCONS_00092682 TCONS_00092680 TCONS_00092678 1 XLOC_056953 Coding TCONS_00092680 XLOC_056953 Coding Coding GOSR1 19:22107585-22144991 j TSS69682 4899 1 TCONS_00092680_2 244 0.0553174117166769 8 0.869242079935837 0.000767216476962007 0.00171094466097317 0.000880557591278591 0.000873371803468182 0.000467329327980847 0.000514657643699172 0.000522108288647141 0.000864517910344451 0.000861876578617753 0.000334088184803101 1.15242032827671e-05 3.08651586800003e-05 0.000161146151901075 0.000287610879835185 0.000211035850088536 0.00140178883403864 0.00104181719147823 0.000931784555935451 0.000867195336849308 0.000985040906143651 0.00067695915407693 0.00031844470038559 0.000390432456135541 0.000737982745527752 0.000690192207800344 0.000795789158929247 0.000616832444110518 0.000226659773253495 5.07861052388082e-05 0.000118006200610499 NM_001038525.1 GOSR1 Bos taurus golgi SNAP receptor complex member 1 (GOSR1), mRNA. 0.0 1945 96.88 0.228209838742601 NM_001007024.1 GOSR1 Homo sapiens golgi SNAP receptor complex member 1 (GOSR1), 0.0 1384 86.40 0.225964482547459 TCONS_00092680_2 sp|Q2TBU3|GOSR1_BOVIN GOSR1_BOVIN Golgi SNAP receptor complex member 1; 1e-162 455 95.00 0.930327868852459 1 coding 0 0 0 0 0.0249404482161343 0.936773324316716 0.0129483656986324 0.798634179116518 GTCTCTGGGAAAATGTACTTCACTGTATTACCTGCATGGCGCTTCCTACATCTGGTTGCTGATCTCAGGAAACAGGCTCGACAGCTGGAAAATGAACTTGACCTGAAACTAGTTTCCTTCAGTAAACTATGTACAAGTTACAGTCACAGCAGTGCCCGAGATGGAAGACGCGACAGCTCTGACACAACACCCCTTTTAAATGGATCAAGCCAAGACAGAATGTTTGAAACTATGGCGATTGAGATTGAACAGCTTTTGGCAAGACTTACAGGAATAAATGATAAAATGGCAGAATACACCAGCAGCGCAGGTGTGCCCTCCTTGAATGCAGCACTGATGCACACGTTACAGCGACACAGAGACATACTGCAGGATTATACACATGAATTCCATAAAACCAAAGCAAACTTTGTGGCAATACGGGAAAGGGAGAATCTCATGGGATCAGTACGAAAGGATATTGAGTCATATAAAAGTGGGTCTGGAGTAAACAACAGAAGAACTGAACTATTTTTGAAAGAACATGACCACCTTCGAAACATTGCTATGGCAACAAAAGAAAATATGACTTCACAGAGAGGAATGTTGAAATCAATTCAGAGTAAAATGAACACTTTGGCTAATCGTTTTCCTGCTGTGAACAGCCTCATCCAGCGAATCAACCTTAGGAAGCGGCGAGACTCCCTCATCCTGGGTGGTGTTATTGGCGTCTGTACCATCCTGTTGCTGCTGTATGCATTCCATTGATGGGACATCTCCAGGGACTCTTGACAGCCACCACTTTCACACCCTGATCCAGAAGAAGAAACAATAGGAAGGAGAAGTTGACTGACCTGCTAATTAGCCTGACCAGCAGGATTCATTCAGGACTGATAGTGATGGACTCTGATGTGGTCAGGTTGAGCGGAAGTCACAGGTTTTCTGTGCTATCTTTTCTAACACACATTTCCCTCTGTTTTTAGTTTCTAAAAAAAAAGATGTTTTGTCTCCCCAAGAGGTAAGTAAACCCATCAGAAACAGAATTTCCATGCTTCGATGATAGTGTTGAAGGCTGATGACAAGCCAGGTCATGAGGCTGGACTCTTCAAAAAACCAGGCTTCTGTATATCCAAAGACTGCTTTCCTTTCAGCCACCAGATGGAGTTGTGAATAAAAATAGTTTTTTCCTTTTATTTTACACTCATGATGAGAAATCCCAAGTCATTTCTTGATAATCTGTGCTATAAATTTCTATTCTTCGTCCCCAACTTTTTTGGTGTTCAAAGAAAATGGCAGTTTTCAAAGAATCTTTGAGATTTTCACAGGCCATCTTCAGCACAGTTGAGGTTATCTGAAACAGAAGACAAGCACTGCAAAAAAGACTTTATCTTGTCTTTTAATCATGCCCACACTCGGGTTAACTGTATTCCTGGAAAAACCATCAAGAATGATAGGCTTATTTTTGCTCAGTCATTGTTTTTTACTTTTGGTTAATTTCTTCTATTGAGTAATATTTATTACTACAAGAAAACAAAATTCCAGTTCTACCACGGCAAGAGGCCAGTGTCTGTCAGTGCCCCGAACTTTTCCTCCTCATGTCATGATTAACACTGACAACCAAGTGAGGAAAATGCTTCATTTTCATTGAGATCTCTTCAACAAGCCACATGTAAAAAGACAGTGAGGGGCCACCATCCAGATGATTCCATTTGTAAATGTTCCACATGTAGGAGCAAAAGTTTAAGAACCCCTGTCTTATGTACCAGGAATTCTGTGTTCTGTGAAAACCTATTCATTCCAAATCTGTTAAGATTCCAAATCTTTTCCAAACATCCAGAGAATGAGGGGCTTTACTACTGAAGGAGAAAATATCAGAATCTGTCTCTGTCTGCACTATCAGAATCTGTCTTCTGTTACCACCCTGGACAGTGGCAAAATCTTAAACCACCCACCAGAATTCTTTTCAGGTTTAACCATTTCCCATAAATGTTACGACTTTTCTAACTGCTGCTGCTGCTGCTAGGTCACTTCAGTCGTGTCCAACTCTGTGCGACCCCATAGACAGCAGCCCACTAGGCTCCTCTGTCTCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTTGCTCAGTGGTGCCCGACTCTTAGCGACACCATGGACTGCAGCCCACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGACACCATTGCCTTCTTCGGTTCTAATTGAACTGCCACAATTAGGTCGAAGACTTCCAACATCTGCTGTTCTTACAAGAAAGAAAGCTACTCTTCACCTCTGAAATGTACTGTGGTATTTATAGTATTGGCTTGAGACCACGCCACAGGAGATAAAAGGATGTTAGCATGCAGTTCTTCACTCCATCACAGTGTGTTCATGGTGACATTCAGATGAACTTGATTACAGGCTGATCGGTAGACTGACCTCTGGTTGGGTACAGAAACAGAGGTTTTTCATTCTGGCATTAGAGTTTCATTATGTTCTGGGGATGAAGAGCAATTGATATATTTTTTTTTAACTATGGGGTTTATTTTTCTAAATATGGGTTGATTGATCAGTCAGTTGATTGGGGATGCCCTTAAAAGAAAATTTAAGTTTTCCCACTGTGAACCTTGAAAGATCAGAGAAGTAAGTTCATTTATTAAATTCTCTGCTGGGAGAACAAAACTGCTCTCCCCTAACTCTATTTATCTTTGATTTTTCAAAGGGTCTTGATCGGTGGTTGTGCCTCAGCTAGAATTTGTGGGACTTTGATTGCTATATAGTCAGCATTTATAAAATCTGAGGTATCATAAATAAAGTTATTTATTTAATTATACTACCAGTGTTTTTACTGGTCTGATTATTTGGTGCGTTCACGAAAGCTGATGGTGGCATGAGAGTAAAATAGGACCCGCGCTCATCTAGCTGCAGCTGAACAAGCGCTTTGATAGCTGGCAAGCCTTTCCATTAGGGTTATGCTTAAAGGAAGTGTTAGAATTATGTTGATTATTTTCTTTATGAAAATAAACATGTTCTTCTAAGGAAGTTGAAAAAGTGTGGTGTAGATGTTGGTGTCAGACAGGTCTGACTAACCTCCCAGTGGTGTAACCCATAGTGAGGTGACCCAGGGCCAAACGCAGGGCTCATTTCTCCTTTACGGTTCCGTCCTTTGTGGAAGGAAGCCCTGGAGCAAGGACAGACGTGTGCCATTGACCAGTAGAGGCTCACTTTGGATCCCATAGTAGCTGATGTGAACTCTTTTCACATTTCACATTTAGCCTTTTTTCTTTTCTTTTTTTTTAACAGCTTACTTTTCTCAACTTTTTGCTGTTGTTACAAACCAGTTACTAGGCTCAGGGGCCAACAGTAATTTGCTTATTGGAGCCAGATGCAAGGAGTTTTCTATTCCTTATCCCAAATGTTGCCTGTTACAGGAAGTTACTCTTTCTCAGTCATGTCTTATATAAGCCATGTCTTTTAGGGATCTTAAATCACTCAGAACTTTCCATTTCACTTGAAATGAGAAACCATGGCAACAAAAAGGGCAGGAGATTCCAAAAGGTATACGTCTCTGAGAGTTTGCTTTACTCTGTGCCAGTAACTTTAGTTTAAAATGGTTAATGAATCTATTACTCAAGTTCAAGCCCAGATGTTCATGTACTTTGGTTGATCTGTCCTGGGTATTTCTATATTCTTGTTACTATTAATGATACTGAGGGAGTCCCTATAACAGGCAGCATTGCTTACTCATATTTTTCTAATTTAGAAAAGGGCTTTTCTTCTCTATTCTTCCTTTCTCCTGCTTACCAAAATTTTCTAAAGAATGTCTTTTTATATCTTGCACAGTACTCATATCAGACATGGGAGTATGATCCTGAGAGTGGAGATGGGTAATGAGAGAGAGAAGTCAGCATGAAGGCCCTTTTGGTACTTGGAACCAAATAATACTGACTTTAGTTCTTTCCTGTTGGATGCCGAATAGAAAAATGTACTTACTGAGCCTTTTGATGCAGTGACTTCTGGCCTCTCTGGGACTGAGGCACCTCGGCCTTGCACTCCCACCATGAATTTTTCTGTTTCATTGTTACTGATCTCAGCCTGATGAAAAGGACTTTAAAGAACTGGACTAGCCTTTTTGGTTTTCTCATACCTCATGTTTGATCACTAGCCAGATGTGATTTCTTGGAAACTGACTGCATTTTCTGACTTGCAGTATGAAGCAAGCTATTGAGGGTGAATGGCCATGTCTTGTGTTACACTGAATTTTGTGGCAAATGTAAAGAGGAAATAGATTCTACTGGGAATTAAAATGATTGTGTTCCATTCTTCTTTGGGGGTAGGAGTTGTTTAGCCTGGTCTCCAAAAAATACAGCTTTTCATCATGGTCTTTATAAACTAATACTACTCCTTTATGAACCTGCATACCCATAAGTTTTATAGGGCAAAAGAAAATGAGGAACCAGTGACTCTGAGGATGTTACTGGGTAAGAAGCTGAGACAGCTGAGCCATGTCCTGAGGCATCTTTCTTATTTTCTTTGTGTCCACTGCAAAGTGTCACTTTCATTTCAAAGTGTTTGCATCTATTCCTATCCTATTAGCTCTTAGAGAGGAAGAGAAATCAATTCCAATCACACTTTACCATGATGGAAGATGTTTCCTCATGAAAAAAAATGCCAATACAGATTTTTAAAAATCTATTCCAAATGCACTTTTTAATTTTTTGCTTTTAAAATGGCTTCTTGGAACCAGGTTTATTGTATTTGTACTTCATTTTTGTTCTCATCTAAATGTGCATTTTCTGACTGTATAGAAGAAGCTTTGTTATGTAATTTAATAATAAATTAGAAATCTG EMBV3_13600 GTCCACAATGGGAACGTTTTCAGGCTCTCCTTCTGTAGGGCCAACGTGGTCAATCACTTC Gene GeneID:506652|LOC506652:XM_002693768:22_cdna Constitutive 0 NULL GeneID:506652 15 GENE LOC506652 NULL similar to olfactory receptor, family 5, subfamily B, member 12 EMBV3_32055 GATTTTTATGCCCAGGTAAGCGACATTACACCAGCAGGAAATGTGGTCCTTTCCCCAGGC Gene GeneID:280805|GHR:NM_176608:56_cdna Constitutive 0 NULL GeneID:280805 20 GENE GHR NULL growth hormone receptor EMBV3_31702 CTCCAAACTACTCTCCACCAGCGCCAAGAGCGCTGGCCCCAAAGGCGACAACATCTACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39544 TTTCTCGGGTGCAGATTTGCGAGCTGGAAAAGCGCTTCCACCGCCAGAAGTACCTGGCTT Gene GeneID:618473|TLX3:XM_002696248:4_cdna Constitutive 0 NULL GeneID:618473 20 GENE TLX3 NULL T-cell leukemia homeobox 3 EMBV3_24536 ACCGTGTATGAAGGCTTCATTTCGGCTCAGGCTTGTGTTTGTGGATCCTTGCTTTAGTAC Variant GeneID:614512|FANCL:NM_001076332:170_cdna 120^397 5 EMBV3_29520 GeneID:614512 11 GENE FANCL MGC133719 Fanconi anemia, complementation group L EMBV3_24481 CCCTGAGCAGGTACAACATCAATGCAGATGCCAAGGCAGCAATGGAAGAGCTCAAGTCCT Gene GeneID:615894|SCGB1C1:XM_002683728:11_cdna Constitutive 0 NULL GeneID:615894 11 GENE SCGB1C1 NULL secretoglobin, family 1C, member 1 EMBV3_12071 CTCCCTTGTAACCCGTGTGCCCCGGACCACTCGCCCTCTAAGTCTTGCCTCCCCTGTCTT Gene GeneID:536311|KRT35:NM_001076073:172_cdna Constitutive 1 NULL GeneID:536311 19 GENE KRT35 MGC139866 keratin 35 EMBV3_27275 TGCTTCTGTGTGCACTGGCCGCCGGGGCTGAGCAGAGCTTGTCACCTTTTCTAGGAATAA Gene GeneID:508683|PFKL:NM_001080244:20_cdna Constitutive 0 NULL GeneID:508683 1 GENE PFKL MGC142668 phosphofructokinase, liver EMBV3_29586 GCGGCTTCGGCGGTGTAATATACATTCGTCTGGGTTTTCTTCTGTCTTGTTTGGAAGTTG Gene GeneID:616972|POLR1D:NM_001046587:76_cdna Constitutive 0 NULL GeneID:616972 12 GENE POLR1D MGC134497 polymerase (RNA) I polypeptide D EMBV3_15642 CCATGGGAACGAGAAGTCTTAGCCACTGCACTACCAGGGAAGTCCGTTCACCTATTAAGA Gene BVT0102_065353 - 0 NULL GK000017.2:64120591-64198894 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36687 GCTCTGGAAAGTCTTCCTCCACACCTTTACGGGAACTAGACCCCCAGGCTACCTTAATTA Gene GeneID:532773|PLEKHA6:NM_001075973:76_cdna Constitutive 2 NULL GeneID:532773 16 GENE PLEKHA6 NULL pleckstrin homology domain containing, family A member 6 EMBV3_02054 TGAGCTTAGGTCTGATTTTTCATGTGGAATTGACCAGTGAGTTTCTTCTCCCCAAATATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26544 GCTTCTGTGTCCCAGTTCATCTTAACTAAGGCGGGACATGAAAGCTTTTGGTGTGCATGT Variant GeneID:282851|DHRS9:NM_174733:193_cdna 150^780 1 EMBV3_09713 GeneID:282851 2 GENE DHRS9 RDHL dehydrogenase/reductase (SDR family) member 9 EMBV3_41789 GCACCCTGTCTTAAAGTTGTGTCTCAAAACAGTTGAGAGTGAAGAGGACCTATTGAACAC Gene GeneID:540281|MGC142792:NM_001083495:161_cdna Constitutive 1 NULL GeneID:540281 11 GENE MGC142792 NULL similar to Lims E protein EMBV3_29196 TTACTTTAATGGAAGCAAGCGGTCCCACGAACGAAGACCTGTACATCAGCTGCACCATGC Gene GeneID:407159|HMGCR:NM_001105613:221_cdna UTR3_Alt 2 NULL GeneID:407159 10 GENE HMGCR MGC166255 hmg-coa-r 3-hydroxy-3-methylglutaryl-coenzyme A reductase EMBV3_30024 TGAACACAAGAAGGATTCATGCTACTCTCCAAAGCCACCTGTGCACCTTCCAACACCTTC Gene GeneID:533188|CD2AP:XM_002697272:32_cdna UTR3_Alt 2 NULL GeneID:533188 23 GENE CD2AP NULL CD2-associated protein EMBV3_03798 AGGCTACAACATTGAGCAAATGGCAAAGCGGATGTAGCCCAGCGGATGCTGGCCACTGGA Variant GeneID:507512|OSGEP:NM_001075319:37_cdna 703^781 1 EMBV3_20665 GeneID:507512 10 GENE OSGEP MGC142422 O-sialoglycoprotein endopeptidase EMBV3_39570 AAGCACTACCTTGACCAGCTGAACCACATTCTGGGTATTCTTGGATCCCCGTCGCAGGAA Gene GeneID:327672|MAPK1:NM_175793:28_cdna Constitutive 0 NULL GeneID:327672 17 GENE MAPK1 ERK2 mitogen-activated protein kinase 1 EMBV3_17312 TTCTACCTGTTCATCGCTCCTCCAAAAACCATCCTGGACGACCACACGCTGACCCTCTTT Gene GeneID:100336787|LOC100336787:XM_002696136:270_cdna Constitutive 0 NULL GeneID:100336787 19 GENE LOC100336787 NULL alveolar soft part sarcoma chromosome region, candidate 1-like EMBV3_31493 ATGCCCACGCGTTCAGCCAGCGAGCATTTTGCAGCCCCAAGCAGGGCCTATAATTTGTAA Gene BVT0101_028881 + 0 NULL GK000019.2:51613484-51633693 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094412 TCONS_00094413 TCONS_00094414 1 XLOC_057440 Coding TCONS_00094414 XLOC_057440 Coding Coding ARHGDIA 19:51630984-51637709 j TSS70618 4477 1 TCONS_00094414_8 271 0.142282778646415 5 0.334919690660321 0.000429080339082668 5.77558355549877e-10 0.000953788251053467 0.000238992727102731 9.22351271428595e-05 0.000246986506255695 0.000283771596267367 1.8475314213564e-07 4.79107805174538e-07 0.000140193767413186 4.02123913400374e-08 7.68506298627629e-06 2.67621822122135e-06 0.000215130643098906 5.70962845164216e-11 1.43067565511802e-08 2.47653313830305e-05 1.41694569236403e-05 0.000833108484418309 1.08591225545354e-05 0.00020059264769335 5.75954062403805e-12 4.36649928765114e-05 6.90352429882767e-10 0.000353766998130349 0.000590706443750537 5.26424357283603e-11 1.63620663739213e-07 2.2564394724038e-05 8.71952566222477e-15 XM_005221011.1 ARHGDIA PREDICTED: Bos taurus Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA), transcript variant X1, mRNA. 0.0 2715 100.00 0.335939245030154 NM_004309.4 ARHGDIA Homo sapiens Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA), 0.0 836 73.67 0.335939245030154 TCONS_00094414_8 sp|P19803|GDIR1_BOVIN GDIR1_BOVIN Rho GDP-dissociation inhibitor 1; 1e-121 350 86.27 0.645756457564576 1 coding 0 0 0 0 -0.00375069526275678 0.984251952054092 0.0231279251309547 0.732636553760016 GTCACACTGGCCAATGTGAACTTCCATGTTAGTTGTTTTGAAATGTCTGCTGTAGCACTGTATTTTAAGTGATAAACTAGGAGTATTACTTTAGATAAGAAGCTTGAAGGATGATGTTTGTCACTCAAAGAAAAAGAACTGTTAAGAGTCAAGACCCCTCCCCCTAGGGTTAACTGCTGCTCCTTAAGAGACCACTATGCCCAGTGACTTTGAAAACTCTTCCCTGGAGGAACCTACTCCACATTGTTGAGAGCTGTTCCAGCTATTTCGGACACTGCCAGAGGCCCTGCTGGAGCAGAAGGCAACTTCCCATTCATGTTTGTCTTGAGCCCTACTGCCCCGGGACCAAAGACGCTGCTCATGCTGAGAGGCCTCCTTCTCAAGCTTCTCCCTGTAGTGGTTCATTACCCCCTTGTCTTTGCTTTGTAATTGTGTGTAGTAAACTGAGTGATTTGTCAACTGAATGTTGGCTACTGTTTTATATATCTCTATTCCTAATTCTCACCTGCTCTTACTGCTGGGCCCTGCCCTTCCTTCAGGCATAGAAAACAGGTTTTTTGGAACATTTGTTTTTGAAGTTCCAGTGGCCAACATTCCGCAGGAGCCATATGGGAAGTCCTTGGGTCAACAGCCCAGGCTGAGCGCTATGCAACATGGTCATCTTTTTGTTGTTGTTTTCATTTTATCACCTCAAGCAGCATATGGGATCTTAGTTCCCTGACCAGGAATTGAACCTGTTCCCCCTGCATTGGCAGCTCAGAATCTTAACCACTGGACCACCAGGGAAGTTCTGGAGTGGTTTGTTACATAGTGGTTTGTTACATACATGGCATGATGGTACCGCAGTTATTAACTCCCAAAGGACCTTTGTACTTAGAATATTGTGTGTAGAAATATTTATGGTGAAGTGACATTGAGGTTTGCTTCAGACTTACTCCATGTCGTACGGAGATGAGGGCACACCTGGCACAGGGCTGGAGGTAAGCTAGAGGGCACCTGTAGACGCTGATGGCAGAAACTCTGGGCTTCATATTCCCATTCTTTCTGCCTCCATCCATGTGGTGGGCCACCTCCAAGATGGCTGAATGGCCCAGCTCGTCTCCTTGTCCTCATGTCCCCATGCTCCCCTCCAGCCCTGTATTGAGGAAGCTCCACATGCCCAGCACAAGAGTAGAAACAAGGGCACCTCTCATACTAGGTTGTGAGGGGCACTGTGGCTTTGTTTTGGGCACTTACTGTTTCCCTGGCTTGAATTCTCTTTCTGAGGCCTCACGTGGGGAAAGCCAGCTGCCTTACAGAGAAGCCAGAAGCTGTGGGCAGCAGGGAACTAAATCCTCCAGCCAACAGCCTGTGAGGATCAGAGCCTCCTGCCCACAGCACGTGCATGAGCTTGGAATTCCTGCAGATCCTGAAACCAGGGCCCTGGCTCACAGTTCAACCACAACCTCACTAGACTGGAGCCAGAACCACCCAGCGGAGCTCTCCCTGATCCTTGGTAAAGACAGTGTATGTTGGTCGTTTTAAGCTGCTAAATTCCAGGGTTATGTTTTTACACAGCAATAGGTGACAGAGTTTGATAGTTTCAAAAAGCGCTTGGGTTGTCGAAAAACAGACTTTTGCTCAGTCAGCGATTCTGCAGTGTAGCACGACGCAGGACGAGTGCGGCCGGGTCTAGCGGCACGGTTTTCAGGTGCGCCAACAGGAAGCCTCAAAAGCGCGTATGGAATAAATACAATATTGGAATGCTCTGCCTTTGGCCAACTAAACTTTCTACATTTTAAGCTGACCATGTGACTCTTAGTTACAGAAAACTCGCAAATATTCCCCCAAACTTAAGACATTTCCAAAAGATATCAAGGTCAGTATTTCACATTAGGTTCTGTGACCTAAAATGCCCCCACCACACGCAATCCAGGGGTGTGTGATGACTTCGTTGTGAAGCATTTGAGGTCTTGCACTCCGCGAGGAGGAGGTGAAGGAAGGAGAGTTGCATGCTAGACCGGCGTTGGCAGCGCAGGCTCCGCCAGGCTGGTTACAAATTATAGGCCCTGCTTGGGGCTGCAAAATGCTCGCTGGCTGAACGCGTGGGCATGTGTCCGACAGTCGCCACGCCTGGTGGCGTCTGGGCTAGGAGCTCCCAAAAGGGCGACGGCATGCTGACTTGGTCTGGAAGGGGAAAGGCCTGGAGAGAGCCATTTGGACACCCGTGGATGAACGTCCGACGATAACTTCCGGGAGGGCGAACAGCGGCGAGTGGGCGCGAAGGCCGCCTAAGGCCGGACAGCTGCCACTCGCTGACCCCGGCTCCTTGATGGGACCGGCTGTGCCGGCTCGTCCCCGCGGCGTGATGGCAGTGTGCCCTCGGAAGGAGAGATGCCCGCTGACGGAGACGCGCCCGTAACACAAGCGCGTCCCAGCACCTCGCAGACCGTCTCACTTCCCCGCCCCTTCAGCTTGCCGGCTGACTTCCTGGGGATACCCGGGACTAAGAGAAGCCTATGGCAAAGGGCACAGGAGCCCCAACCGGTAAGTCCCCTCTGCCGCGCTGCCCAAACGGACGCGCCCACGAGGCCGGCCCGCAAGATGGCGGCGGCGCGCTGCCCGCAGCTCCTCGCACATGCGCTATCCGCGGCCCGCCCAGCGCGAGCGGAAGTCGCGTGACCCCGGAAGTGGCCGGCAGGGCGCGCGCGGGCGGGGCAGCGACGTTCGTCATTCTGTGCGGGAGGGAGCGCGAGAGCGGCGCGGACGATCCTCCGGTGTCTCACATCCAGCTAGAGGTGAGTATGGCTGAGCAGGAGCCCACAGCTGAGCAGTTGGCACAGATTGCGGCAGAGAACGAGGAGGACGAGCACTCAGTCAACTATAAGCCCCCGGCCCAGAAGAGCATTCAGGAGATCCAGGAGCTGGACAAGGACGACGAGAGTCTGCGCAAGTACAAGGAGGCCCTTCTGGGCCGTGTGGCTGTGTCTGCTGGTGATCTGGAGAGCTTCAAGAAGCAGTCCTTTGTGCTGAAGGAGGGTGTGGAATATCGGATAAAAATCTCCTTCCGGGTGAACCGAGAGATTGTGTCTGGCATGAAGTACATCCAGCACACGTACAGGAAAGGCGTGAAGATTGACAAGACCGACTACATGGTGGGGAGCTATGGGCCCCGGGCGGAGGAGTATGAGTTCCTGACCCCCATGGAGGAGGCGCCCAAGGGCATGCTGGCTCGAGGCAGCTACAACATCAAGTCCCGCTTCACAGACGACGACAGGACCGACCACCTGTCCTGGGAGTGGAATCTCACCATCAAGAAGGAGTGGAAGGACTGAGCCCCTGCCGGGAGGCGGGCAGGGCAGGCGGACGGAAGGACGGACGCGCCCCACCCCACCACCCCAACCCCCTGACCCCAAACCAAAGTGCTGACAGGGCCCGCCCACGCTGCCACCACTGCCCCTGGGCTGCCTCCTGGCTGGCCTGTCCCTCCTCTACCCTCCCAGCCCACTGGCCCCAGCCTCCTCGGTGGTCTAGTGTTGTTGCTGCTTCCGCCTGTGCTGTGGGGAGGGAGGCCTCGACCTCCCCTTCTGTATCCCTCGAGATTCCCCCACTGTCCTGACCCGACCTGAGTCCTTGGCACGGGAGTCAGGCATCGCAGTGGGGTTCAGGGTGCTCAGGTCCCCTGGGCCTTCTCTGTTACGTTACCTGGACTCCTGTCGCCCCCTTCCTGGTGGGGGTGGGGTGTACTGCATGGGGCCTCGTGGGGCCGGTTGTCCTCCAGCTTTCACTTCTCCCCGGTCAGCCCATCCATCACTGTCAGTAACGGTCTAACCATGATGCCTTAACATGTGGAACGTGTGCTGTGGGGGCGTCACTAACCTCTAACCCTGTGTCTGCATGAGCATGTGGTGTCTCCCTGCCCAGTCCCTACCCTGTCTGTGATCCCCGTGGCCCGGGAAGGCTTCTGGGATGTGCTGGTCCCTCGTCTGCCCTGGCCTGGCCAGGCCTGCGGGGACAGCTCCAGGGGCTTGGGAAAAGCCAAATTGCCAAAATTCAAAAGCGGCCTCCAGGGCCACCTGGGAGGCTGGGTGTCGTCACGCCTCTGCCTTCTTTGTCCCAGTGGGCAGTGCCTACAGCCCACGGCCCCAAGAGAGAGCCCTCGGCAGACAAAGCCAGTGGCCGAGCCTTACTTGTCCCTCCTGGCCCGCCGGCCTGGAGTCGTGTGCCTGGCCCGCCAGTATTTATTGCCTCCATATGTGCCGTCCTCTGGGCCCGCTGGTCTGCCCCTCTGCCCCCGGGCTCGGTGCCACCATCCCCAGCAGGCCCTCCCTGGACCCAGCCAGGACAACTGTGGGACCAAGCTTGCACCGCTGGAGCCATCCCCTCTGCCCCCACCCCACCCGACCCCACCCTCCCTGGTCAGGCCCGGGCCTAGAATGCACAGGCGCCTGTCCCTGCTTCTCCTTTTCTGACCGGGAAATAAACTTCCCCCTAAGGA EMBV3_19858 CCGCCAGCACTGAAAACTGAGGAGCGCAAGCTCGTTCAGGCCTTCACCCACGCTCCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10671 CCAGCTCAGGAAGCCGTCCTCCACTCTGATTTTCCCACACTCACCTGCATACTGAATTTT Gene GeneID:512578|KCTD15:NM_001075568:604_cdna Constitutive 0 NULL GeneID:512578 18 GENE KCTD15 MGC139873 potassium channel tetramerisation domain containing 15 EMBV3_43672 CAAAGAGGAAATGAAGAGCTGCGGGGTGAGTAACTTTGAGCAATACACGGGGGATGACTG Gene GeneID:540237|EXOC8:NM_001098112:105_cdna Constitutive 0 NULL GeneID:540237 28 GENE EXOC8 NULL exocyst complex component 8 EMBV3_04822 TAAGAAGAACAAGCATCTCTCCCTGAACATCACAGCTACCAACCCTGGAGACTCAGCCAC Gene GeneID:100335294|LOC100335294:XM_002690610:105_cdna Constitutive 0 NULL GeneID:100335294 10 GENE LOC100335294 NULL hypothetical protein LOC100335294 EMBV3_13756 GTGTACGTGAGCAAATACAAGAAATGACACACAAGCACAACTCTTCCGATGTGGCAGTCC Gene BVV0102_043955 - 0 NULL GK000010.2:16117542-16192261 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012819 1 XLOC_007930 Coding TCONS_00012819 XLOC_007930 Coding Coding GLCE 10:16009403-16119405 j TSS9636 5583 1 TCONS_00012819_4 617 0.0668099588035107 4 0.949282279252007 0.00346696450851013 0.00250698517920257 0.00170378562612264 0.00120407647700254 0.00152851560654462 0.00141890752215658 0.000588128582215615 0.000855681024304668 0.00114065177725332 9.05006640287091e-05 0.000115721465213245 4.41217851672378e-05 0.000201067068525534 0.000487408170317591 0.000150547588587526 0.00426610160812122 0.000614380059362378 0.0013978581205141 0.00234782962707254 0.00275816285773504 0.000948342488321465 0.000625567868475552 0.00153596211960026 0.00173087683062158 0.0023053422848464 0.00195140483287384 0.000980010633925653 0.000191035460237959 0.000278274809423112 0.000472970560513071 XM_005211251.1 GLCE PREDICTED: Bos taurus glucuronic acid epimerase (GLCE), transcript 0.0 9465 100.00 0.939817302525524 NM_015554.1 GLCE Homo sapiens glucuronic acid epimerase (GLCE), mRNA. 0.0 3995 86.15 0.60970804227118 TCONS_00012819_4 sp|O18756|GLCE_BOVIN GLCE_BOVIN D-glucuronyl C5-epimerase; 0.0 1291 100.00 0.99837925445705 1 coding 0 0 0 0 0.0205428248129504 0.923897934366584 0.00478958683704074 0.929373392335589 CTGTAGCTCTGTCTCCAAGCTGCGCGCGGAGCGGGAGGGATCTCCTCACACAAGCGCTTCCTCGCCGAGGGGTTGGAGCTGCGGCAGACGCAGGCCTGGGCCGCCCCTTCTCTGCCGCCTCCTTCTCTTCCTCAGGGTTCCCCGGTCCGCTTGCCCTACGACGCTGCCCAGGTATGGTCTGAATATGCGTTGCTTGGCAGCTCGGGTCAACTATAAGACTCTGATTATCATCTGCGCACTCTTCACTTTGGTCACAGTACTTTTGTGGAATAAGTGTTCCAGTGACAAAGCGATCCAGGTTCCACGGCACTTGAGTAGTGGCTTCAGAGTGGATGCCTTAGAAAAAAAAGCAGCAGCGTCTGAGAGCAACAACTATGTGAACCACATGGCCAAGCAGTCTGAGGAGGCCTTCCCTCAGGAACAGCAGAAAGCGCCCCCTGTTGTTGGGGGCTTCAATAACAATGGGGGAGGCAGGGTGTTAGGGCTCAAATATGAAGAAATTGACTGCCTCATAAATGATGAACACACAATTAAAGGGAGACGAGAGGGGAATGAAGTCTTTCTTCCATTCACCTGGGTAGAGAAATATTTTGACGTTTACGGAAAGGTGGTTCAGTATGATGGCTATGATCGGTTTGAATTCTCTCATAGCTATTCCAAAGTCTATGCACAGAGAGCCCCTTATCACCCTGATGGTGTGTTTATGTCCTTTGAAGGCTACAATGTGGAAGTCCGAGACAGAGTCAAGTGCATAAGTGGGGTTGAAGGTGTACCTTTATCTACACAGTGGGGACCTCAAGGCTATTTCTACCCAATCCAGATTGCACAGTATGGGTTAAGTCACTACAGCAAGAATCTAACTGAAAAACCCCCTCATATAGAGGTATATGAAACAGCAGAAGACAGGGACAAAAACAGCAAGCCCAATGACTGGACTGTGCCCAAGGGCTGCTTTATGGCTAGTGTGGCTGATAAGTCAAGATTCACCAATGTTAAACAGTTCATTGCTCCAGAAACCAGTGAAGGTGTATCCTTGCAACTGGGGAACACAAAAGATTTTATTATTTCATTTGACCTCAAGTTCTTAACAAATGGAAGCGTGTCTGTGGTTCTGGAGACGACAGAAAAGAATCAGCTCTTCACTGTACATTATGTCTCAAATACCCAGCTAATTGCTTTTAAAGAAAGAGACATATACTATGGCATCGGGCCCAGAACATCATGGAGCACAGTTACCCGGGACCTGGTCACTGACCTCAGGAAAGGAGTGGGTCTTTCCAACACAAAAGCTGTCAAGCCAACAAGAATAATGCCCAAGAAGGTGGTTAGGTTGATTGCGAAAGGGAAGGGCTTCCTTGACAACATTACCATCTCTACCACAGCCCACATGGCTGCCTTCTTCGCTGCCAGTGACTGGCTGGTGAGGAACCAGGATGAGAAAGGCGGCTGGCCGATTATGGTGACCCGTAAGTTAGGGGAAGGCTTCAAGTCTTTAGAGCCAGGGTGGTACTCCGCCATGGCCCAAGGGCAAGCCATTTCTACATTAGTCAGGGCCTATCTCTTAACAAAAGACCATATATTCCTCAATTCAGCTTTAAGGGCAACAGCCCCTTACAAGTTTCTGTCAGAGCAGCATGGAGTCAAGGCTGTGTTTATGAATAAACATGACTGGTATGAAGAATATCCAACTACACCTAGCTCTTTTGTTTTAAATGGCTTTATGTATTCTTTAATTGGGCTGTATGACTTAAAAGAAACTGCAGGGGAAAAACTCGGGAAAGAAGCGAGGTCCTTGTATGAGCGTGGCATGGAATCCCTTAAAGCCATGCTCCCCTTGTACGACACTGGCTCAGGAACCATCTATGACCTCCGGCACTTCATGCTTGGCATTGCCCCCAACCTGGCCCGCTGGGACTATCACACCACCCACATCAATCAACTGCAGCTGCTTAGCACCATTGATGAGTCCCCAATCTTCAAAGAATTTGTCAAGAGGTGGAAGAGCTACCTTAAAGGCAGCCGGGCAAAGCACAACTAGAGCTCAGAACCAAAATCCTACGTCAGCCTCTGCTGTACACAGAAACTAGAGGCTCTGTGTCAGCAGAGCATAGGCACATTTTAAAAGGCTGTATACTAGGTTTTTGTGGATTACATCAAAGTGATAAATGATCCTTAAAACCAGTCTTCTGAGATAATTGCATTCCATGGGTTTAGTGTTTAGAATGTCGATGGCATTTATAGCAGAAAAGTGTTTAGTCAGTGGGCTGAATGAAGATGTTTAACTTGGCCTCGCTTATCACCCTGTTCAGTTCCACAGGTAGTCCAGTTCTCTCGATTTGGGAAAGACAATGGTAAGTAGCTCTTGATGGCCAGCTGTCCAGCACTTGTCTGAAAACTTAGTATGGGGCTCTTTTAAAATGTGGTTATTTATGTTTATGTTGAAAGCAGACTTTAAAAAATAATGTGCTAAAATACAGTAAATATGTACTTGTAGCCTGAATAGTGGACTGTGTGCAACTTTAAAAATGATTTTTCTTTTCTATAAATTAATTTCTTAGGGGTGGATGAGCATTTGTTGTGTTTGTTCAAGTTGTTATATATGGAGAATATTTTGAATTTATGGTTTGCTTGAAGTGTATAAATTAAAAACACAACCAGTGTTCAGGCTTCACAGTTATATAATGTAAGCACAACTAAAATGAAACTTGTTGACTGCACAAGAAATTACAAAACAGAACAAAAATGTTATCTGTTTTATGAAACTATCTACAATCAGTAAAGATTTGATAATCAGTATACCCCTCCTGTACCCCCATTGTGGTGGTTTCTTTTTGCCACTATCTCAAATTTTGTATTTCATTTCAGACTACACTTGAGAGTTTTGTCTATTTTGGGGGGACATTTTGGGGACATTTGGGAAATTTTACTATAAACCTAGATTTGATGAGGAGGTAGTAAGTTTAATAAGCCCACTACCACTGCCTTTTCTAGATTCTTTTCCCCTTTAAGGAAAAATATTAGGTCAGATATTATAAGGATTGTAGCAGATTTTTTTCCTACTTAGATCATTCTTGGTCTACAGCTTTCCAAACTATTGATGTACACAAAATACATAGTTTTTGTGTAAGCTTTCCAAACTTTTCTGGTGTTTTTTCTTTGCAGTTTTTAATTTTAAATTATTTCAGCTCTTGGATAAAAGTGATGCTACTATATTAGCTGTACATGTGTAATCAGACCTTTATTTTGGTTTTATATCCCACATACCTCACATAAATAGGCATCATAGCCCTCACACCCTGGGCAGTGTCTGCTCTAGGACTTAGGCAGTAGGTCAGAACTGAGGGAGGTTGATTTTGCTGTCTCTGTTTTAGTGTATGACAATACAGTAAATCAATACAATAACTTATATAGATTGGAAATACGAGATCCGGTACTTTCAGAGGACTGAGTCTGACACACGCAGTGCAGTGTGTGTGTGACCTGTATGAAATGCACATCAAGAGCGAGGTGGGCACCTGCCTGCCACTGCATCTTGCCTGGACTTAGTCTACCAACACCACTCAGAAATGGCAAAATGCATACATGCCTTTGAGCAACATATATGTTGTATCAGCAGCCGGAACGAAGACCTACAACTGACATGAAACTGTTAGTCACTAAGTCGTGTCCAACTCTTTGTGACCTCATAGACTGTAGCCCGCCAGGCTTCTTTGTCCATGGAATTCTCGAGGCAAGAACACTAGAGTGAGTAGCCATTCCCTGGCTCCAGGGGAACTTCCCAACCCAGGACCGAACCTGGGTCTCCTACATTGCAGGCAGAGTCTTCACCATCTGAGCCACCAGGGAAGCCCATGGAAACTGGCCATGGAAAAATAAGTTGAAACTCCCAGTTTAACTGACCACACGTCAATTTTGCCACAACAGTTCCCCCTAGCTGTTGACCTTTGTAGTCTTCATACATTAGATGTCTCAATAAGAATATCTAGACTCCTTTTTTAATTTTATTTTCACCGCTCAAAAATAAAGTTTCTCCAGTCTGGAAATCCTTTTTACGCCATTGTACTTGTTATTATTTAGAGCAGTCCAGACTTCTGCCTTCTGTTTGCATACTGCTACTTCAGATTGAGGGGATCAGTGAAAACAGTGTGGTACTGCTTCTGTGACAAATCCCAGTGCCTTAACAATGTGGCTGTCTTTTCTCACTGAAAATAGAAAGACATTTTGATCTAGAAATGGCATTGCAATTTCTTTGCTGTTGGTCTCATACTGCCTTCCCTGTTGCAACAGCAACTCGATTTTTCCTGTGATCCCAGGATTTTCAAAGAGGGTGAGTTGAACCTGTAGCATCCCTGGCAGTACAAACCAGTGGTTCTCAAACTTTAGAATGCCTCAGAATCACCTGGGAGCTTACTAAAATACAGATTCCAGATATCCAGTAAATCTGCCAGTGAAGCATGGTAGTCTGAATTTTTAAAATACGCATTCAGGTAATTCTGAGGCAAATGATCTGAGGGACATATGTGGGGAAACACTGCCCAAGACCATCTGTCATTTTTGTTCCTAAACACATGGAGTTTTCTAGGGTTTTAAATCATGCAAAATGTTTAGTCTGAGATTAGAGAAAATGGGGAAGGTATTTTGCCTTTTTTTTTTTTTTTAATTCTTTAAATTTTTCCTTGTTCCAAGATTATGGGTATTAGTTGTTTACACTTATCTTGAGTTAGCTTTGATGTTTAATTAAATCTATTGCCACTTCAGTTATAAAACCAGCCAAAAGTTTCCAGATAAAGGTCAAGTTTGACCCTTTCAGAGTTACTGTACATAAAGGCTTCATCCAAAAACCATCCAGTGTACGTGAGCAAATACAAGAAATGACACACAAGCACAACTCTTCCGATGTGGCAGTCCTTTTTCTTTATAGGTGTGCAAAAGTTTCACTGAAAGCTGCTATTTTCATCCTCCTTGTGATTGTTTTTCTTGTTTCTCCATTGTACATGTGGGTTATAGACCATATGTTAAATATGCAATAACGTGTTTACTGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTGCAGTTTAAGCACAATGTGCACATGTTAGTTTTATACACAGCAAAACTTGATTTTTTGCAGATGGAAAGGTATTTTGTTTCTATACAAAGTAAATGGATTGTTTGTGCTTAACGTAAAGCTGCTTTATATAATTGTAAAATAAAGTTTTTATCTTAAAAGGACTATACCTGGATGTTTCTCTTCTCTGTTTATTCTAAGATTACTTGAGCCCGGCAAGCAGATTTCTGACCGTTTTCGGTTCAGATGGTGGCAACTAGTCACACAATAAATGTTCGTGAAAGGTGTATGAGACCCTTTAAGACAAATTGGGGAATATCATAAGGGCCTTCACCCTAAGGAGGTTTAGTCCTGGGTGGGGCGGTGGAGAACACAGTGTCCACAAACAGTTTCAGAAAAATAAAATGCCAAATGATATGGTCAGTCAGGGAGGGTGTTACAGAGGAGATGGAGCTAAGCAGGGGCTTTAGGCCTGGGTGCCAGCTGGGAGAAGAAGAGG EMBV3_12218 GCTGTGGTCCAAGGCCATTTTTGCTGGCTATAAACGGGGTCTACGGAACCAAAGGGAACA Gene GeneID:506768|RPL35A:NM_001025321:32_cdna Constitutive 0 NULL GeneID:506768 1 GENE RPL35A MGC137069 ribosomal protein L35a EMBV3_11957 GATGAGTGTCAACGAAGTGTCAGCTTTCTCATTGACTCTGGAGCAGAAAACTGGCTTCGC Gene GeneID:100336358|LOC100336358:XM_002690937:265_cdna Constitutive 0 NULL GeneID:100336358 10 GENE LOC100336358 NULL cortexin 2-like EMBV3_07305 CTTCTGTCTACCTTTTATTCCTCCTCAGAGATGCTGTGAGAGAAGTAAGAAAATATTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01732 CAATAAAGGCTCCTTCCAACAAAATTAAGCATGGAGTTGTGTTTTGGCTGTTAAGTTGGG Gene BVT0102_411436 + 1 EMBV3_13450 GK000002.2:37929696-38090773 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18377 GTGCAAGGGATTCTCAAGAGCCTTCTCCAGCACCACAATTCAAAAGCATCAATTCATTGG Gene GeneID:537188|UGT3A2:NM_001076087:57_cdna Constitutive 0 NULL GeneID:537188 20 GENE UGT3A2 MGC137083 UGT3A1 UDP glycosyltransferase 3 family, polypeptide A2 EMBV3_39221 CTCTTCTCAAGCTTCGTCCAGGGTTCATTATTTCTGTCTGCTGCCACGTTGTCTCGCATG Gene GeneID:514201|SMPD3:XM_002694829:719_cdna Constitutive 0 NULL GeneID:514201 18 GENE SMPD3 NULL sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) EMBV3_15175 ATCCAGGACGAGGCCACGGGGCTGAAGAAGGTCGAGAAGGCCCTGACCTACGAGAAATTT Gene GeneID:507264|SERPINB1:XM_002697609:100_cdna Constitutive 0 NULL GeneID:507264 23 GENE SERPINB1 NULL serpin peptidase inhibitor, clade B (ovalbumin), member 1 EMBV3_04188 GGATGAGCTGGACCAGACTCTGGAGGAGTTCAGATGTTTGTCTTCTTCCCAGAGGAGCCT Variant GeneID:512971|POLR2E:NM_001038093:50_cdna 192^282 2 EMBV3_31039 GeneID:512971 7 GENE POLR2E MGC134612 polymerase (RNA) II (DNA directed) polypeptide E, 25kDa EMBV3_16300 GCGTCCTGAGAGCGTCGGGACCCGGAGCCGATACGTTCCTAAAACCTCACTGAGTTCACC Variant GeneID:618609|MRPL21:NM_001076514:28_cdna 112^169 1 EMBV3_19924 GeneID:618609 29 GENE MRPL21 MGC133585 mitochondrial ribosomal protein L21 EMBV3_04677 CTGAATCAGAACCACAAGGGCTGGGACACTGGCATTTGTTGATTAAAAACTCCCCCCAGG Gene BVT0101_033645 + 0 NULL GK000002.2:92495798-92564260 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26732 AATCAATCATCAACAGCTTTCCCAAAACACACCGCCTCACACAACCCTGCCGATCAGAGG Gene BVV0102_225001 + 1 EMBV3_07495 GK000020.2:35158962-35248346 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15888 ATACCAAGAGTGGAACAGGGCTGTGGGTGATAAGGGAGCCTTCAGGATAGGAGACGGAAA Gene BVV0102_293868 + 0 NULL GK000007.2:44990574-45016285 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25752 GGCGTCTCCAAGAGTCCCCAGATCCTTAGCCAATGTTGTGTTTGACAATAACCCTGGATC Gene GeneID:100140422|LOC100140422:XR_083825:12_cdna Constitutive 0 NULL GeneID:100140422 13 PSEUDO LOC100140422 NULL similar to FLJ32214 protein EMBV3_26293 TCATTGCCACACATTCCTCCAGCCCCTTAGCTGAAAGCACAATGCTGAAATCAGTCGTCC Gene GeneID:509821|ELMO1:NM_001024505:2_cdna Constitutive 0 NULL GeneID:509821 4 GENE ELMO1 MGC139838 engulfment and cell motility 1 EMBV3_29324 ATGGGGAAACCAGCCTGCTGGGGCAGGAGGCTACCCTGGACAAGGACCTCCTGGGGCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14086 GCTGGAAACCGTGGGGAGCATTTTCACGCGGAAATTTTATGCAGCCTATGGATCTGGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19146 GTAGTGAAATCGCGAAAGGTTCAGAATCGGCTGCAGAAGAAAAAAGGAGCCACCCCCAAC Gene GeneID:541106|RRAGD:XM_002683691:8_cdna Constitutive 0 NULL GeneID:541106 9 GENE RRAGD NULL Ras-related GTP binding D EMBV3_42609 TGGTGTCCATATCCAGGGCACAGTGAATTCTGGGCAAAGCTATTTTCCTTAAGCCCCAGC Gene GeneID:781425|MCART1:NM_001099394:53_cdna Constitutive 1 NULL GeneID:781425 8 GENE MCART1 NULL mitochondrial carrier triple repeat 1 EMBV3_12877 TTAGAAGGGAGCTAGAAATGACTGAACACTTGCGTCACCTCCAAACCCTGCAGAATCCCC Gene BVT0102_153361 + 0 NULL GK000027.2:37214597-37234388 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156439 TCONS_00156440 TCONS_00156438 1 XLOC_095016 Coding TCONS_00156440 XLOC_095016 Coding Coding THAP1 27:37231811-37240565 = TSS116834 3637 1 TCONS_00156440_2 213 0.032169370360187 3 0.584828058951217 0.00426263817408071 0.0027650589629187 0.00301081152885793 0.00155695391542449 0.00153775313954288 0.00100374606494149 0.00149817590872151 0.0014854319649764 0.00284293267522942 2.63643437513831e-07 0.000179601631740499 2.09524990685957e-08 0.000413772812412885 1.25033322906177e-08 0.000558566354398456 2.52312955152508e-07 0.000269252119871744 0.000531894916444061 0.00341457435034509 0.00308139590339349 0.00160923243084664 0.000169956178932022 0.000496235984280125 0.000528918704298571 0.00535560879691285 0.00262111771073498 0.00290824809544373 0.000495599046721355 0.000104289237452978 0.000583598440092637 NM_001034648.1 THAP1 Bos taurus THAP domain containing, apoptosis associated protein 1 (THAP1), mRNA. 0.0 1862 99.81 0.285125103106956 NM_018105.2 THAP1 Homo sapiens THAP domain containing, apoptosis associated protein 1 (THAP1), transcript variant 1, mRNA. 0.0 1402 82.16 0.382458069837778 TCONS_00156440_2 sp|Q3T0G1|THAP1_BOVIN THAP1_BOVIN THAP domain-containing protein 1; 1e-157 439 100.00 0.995305164319249 1 coding 1 1 1 0 -1.39062529539402 0.0135633519603147 -0.0593167471676023 0.688852573798262 CAGTAGGACGAACTCCTCGCGAGAGGTGAGGTTGAAGCTGCCTCCGCCATCTTGGAGATGGGAGACGGGCGATGGCTGTGGTCTTTCCGCTAATGCAAACAACAAAACGGGCACATTAGTGACTCCCGAGTGAGGCCCTCATCAGTCAGGTTGTTGGCCAAAGCTACAGAAGAAGCGAGGGTGTCAAAGCAGAGCGCGGCGACACTGGTAACAGCCTCAACTGCCTGCTGGGGCGGCAGAAGTGAGGTAATTGAGGACCGGAAGGATGGTACAGTCCTGTTCCGCCTACGGCTGCAAGAACCGATACGACAAGGATAAACCCGTTTCTTTTCACAAGTTTCCTCTTACTCGACCCAGTCTTTGTAAGAAATGGGAGGCAGCTGTCAGAAGGAAAAACTTTAAGCCCACCAAGTACAGCAGCATCTGCTCGGAGCACTTCACCCCGGACTGCTTTAAGCGGGAGTGCAACAACAAGCTGCTGAAAGAGGACGCCGTCCCCACGATATTCCTGTGCACCGAGCCGCACGACAAGAAGGAAGATCTCCTGGAGCCACAGGAACAGCCCCCGCCGCCTCCTTTAACGCCCCCCATTTCCCAGGTCGATGCTGCGATCGGGCTGCTCATGCCTCCTCTCCAGACCCCCGACAACCTCTCCGTGTTCTGCGACCACAACTACACCGTGGAGGACACCATGCACCAGCGCAAGAGGATCCACCAGCTGGAGCAGCAAGTGGAGAAGCTCCGGAAGAAGCTCAAGACCGCGCAGCAGCGGTGCCGCCGGCAGGAGCGGCAGCTGGAGAAGCTGAAGGAGGTGGTGCACTTCCAGAAGGAGAAGGACGGCGCCTCCGAGAGGGGCTACGTGATTCTCCCCAATGACTACTTCGAGATAGTCGAAGTCCCAGCGTGAAAACGTGAGATTGGTATTGGTTTTTCATGGGGCAATACCACCTACCCTCTTCTACCCTAGAGAGGAGTTTCATTTGAAAAGAGATTACACTTGATAACTTGTACAAAAGCAATTCAGAATATTTTTTTAAAAGAATAAATTAGATATATACTGTAAAACTGTAAATTTTTTGTTTGTAATTTCAGGGTTTTTACATTTTAGCAAAATATTTTAAAAGTGATAAACTAACCTCAGAGCTTCAGTGTAAGTTTGTTTCGAGATTGGGGATTTTTGTTTTTTAATTCAAGTATTTATAGACATGATATGAAAATAAAAAGTAAAGAGAACGAGAACAGTGCAGTAAGGATGATTTAAGTTTCAAGTTAAAATTTAGTGCAGTTTATTGAAAGAACTTAGTCACATTTTAAATCAGAAGCATAGGACATGATGTCTCAGAGTATATATATTTACACATTCTTATTTGTAAAGTCGACAGATTCATTTATCTTAATCCCTTATCAGAGTTAACTTGGTGAGTTGTGTCATTCCATACTTAATCATAATGGTTAAATGATGTTAGAGAAGGAATTTTTTTAGAGAGTGGGGCCCTTCCTTTCTCACCCCCACCCAGCATTATAGAATTAGAAGGGTGTCTCCAGTGGAAGACACACTCTCCAGTAAGCAGACTGCGCATCGTTACCAGTGAGATGAGCAGCGGCCACTGGGGCTGACCCCGGGCTCGCCTTTTCTCTTGCTGCTCTGAGGTCAGGGGCGTCCGGTCCCCACTGTGGGTGTGTGTGCACCCAGGTCTCTGCCAGCTGTGTCGTGTGGGTAGAGTGTGACTCGTTGCATCAGGTGGGAATCTTGCTCTTGACGAATTGATTGTCAAGACATCACACAAAAGAAAATTTCTTCACTTTTACCACAAGCGAGAAGTCACATCCTATTTACCTAAATGAGTCATTTGTATTCAGAGGCATCCTAATAGATAATGCTTATTTTACTCAAAATTGAGACTCAAATGCTGCGGTTTCTGTTCATACTGTGAGTTGTGCTCTAACTTTGTGAGAAATTTTACATAGGTTTGAAATGAAAACAGTTCTGAGTAAACAAGCACTGCCATAGGAATTACCTGCTTAAATTTAGAATAACTGCTCCAACTATAATTATTTTGTATTTCAAAGTGCTGCACAGGCCTTTGAAGGCAGCATTAAAGATTGGCGGTCGTCAGTCCAGGGGTGTCTTTTGTAGACCTGATTCTCGGTGTAGTTCACTGCCGTCTTGCCAGTGCTTTGATTCAAAAGTAGAAAATCATGACTACTTGAAATTTTATCATCTGATAACACTTAGAACTAACTCTGAGGAATCAGAGGACTTTTTCTAGTTATTCATGGGTCTCATCACTGTTTTTGGAAGCTACAAAATCTCTTAAGTAGTTTGTTTTTACATTTCATCTCTCTAGCAATTCCTGGAGGATATGTGGGTAAATATTTTACACAATATATATGTGAAAACTAAATTGTCATGGACATAAAAGAAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCCCATGTCATCAGAACCAGGAATCCAACATTAATTGTATAAGTGACCGTCATAATCAGTTAGCATCTTAGCATTATGAATTAACCTGAAGCTACTTTTTTTCGTGGGACAGACATCCCTAATTGGAGAGAACTGAGCAACAGCATGTGTGCCAACTATTTGCATTTAGATCACTTACTATGTTTAACACAGAATTTGAAGTACAGGTGCTGATTTCTGAATTTGAAATGTAACGTTTGTTGAAATGTTTTAAAAATTCATTTTGTCTGTTGTAGTGTTTATGACATTGCCAAGAGAAAGAGAACATTCAGGCTAAAATAGGTCCTGTTCAGTCACAGTGAAACGTGGTCAGAAACAACAGGGCAAGGTCTCCGTCTGGAACAAATGGGGAGAAGACCCCTGTGAGTTTCATCATAGTATGAAAGATGACGTTTATTTTAAGCACAGATAGTAACATCCTGAAGTTTCCATCTATGAATGATATAGTCTGGCAATAATAGAAGAAATAACTTTTTCCCGATTAGAACTGCTAGGAAAACTGTAGAATTTTAGAATTAGAAGGGAGCTAGAAATGACTGAACACTTGCGTCACCTCCAAACCCTGCAGAATCCCCTTGTGAAATATCCCTGACAACTGGACATCTGTTCTCTGTATACCGTGGATGTGTAAGCAGTGCTGTTTAGATTCTCTGAAATGAGTTTCTGGAATAGAGTAGCATTTGTTGCCACTTTTAAAAATACTTGTTTATAACACAACTATAAACTTCACTTTGAACTGCTGCGTAGTTTGAACTATCAAATTCCAAATTAAAGAAGTTTTAAAATTTTGTAAAATAAATGTTTATTGTGTGCCTGCTACATGTGCTAAAAATATTTCTGTCATTGCAGTTAAGAAACAGTGGTGTCTAAAGTTAACTAGCAAAACTTTTTACTTGGAAACCTAAATACATGAGATTTTCTCTTTTAACTATAATTTGTGTAATCCCTTTCTTAGAAGGTATAGCCATAATGGTGAAGGCAGATGAAAGTTCCACTTGACATGGATTTTGTTGTTGTTTTTGTTTTAAAGATTGAAGTCCTATTTTCTGATCATCTTTAGTTATTTAAAAAATTGTGTACACACACACACCCCAAACCTATGACTTTTATAAAGTCAGTCGTGACCCTTAA EMBV3_08128 ACGCTCATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAGCAAG Gene GeneID:280726|ASS1:NM_173892:461_cdna Constitutive 1 NULL GeneID:280726 11 GENE ASS1 ASS argininosuccinate synthetase 1 EMBV3_06296 ACATGCCTGTCAAGGGGAGAGCTTTGGAAGGCAGATTTTATTCAGCCTGTAGAATTTCAG Gene BVV0102_186714 + 0 NULL GK000010.2:92890753-93168467 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18456 TGCACCACTAAGAAAGATATGTAGAAGCATTCAAAGAAATCAAAATTAGAAGTTGCAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21036 GCGTGGCAACGGGATTAATGTGCTCAAGATTGCACCTGAGTCGGCAATCAAGTTCATGGC Gene GeneID:100335169|LOC100335169:XM_002688910:202_cdna Constitutive 0 NULL GeneID:100335169 7 GENE LOC100335169 NULL small calcium-binding mitochondrial carrier 3-like EMBV3_07334 ACCTGTGTATGGTGACTGGAGGTGCTAACCTGCGAAGAATTGGTGTGATTACAAACCGGG Gene GeneID:781612|LOC781612:XR_083626:92_cdna Constitutive 0 NULL GeneID:781612 3 PSEUDO LOC781612 NULL similar to ribosomal protein S4, X-linked X EMBV3_06993 GCTCTGCATTTTACTGGACACTGAGGCATCAAGGCAACTGTAGCAGTTAACAGAAAGCTG Gene GeneID:317656|PCTP:NM_174835:2_cdna Constitutive 0 NULL GeneID:317656 19 GENE PCTP NULL phosphatidylcholine transfer protein EMBV3_33753 GACAAAATGGGACCAAGTGGCCAATAAGGTGGGAAGGAAACCACAAAAGGCAGTATGGCC Gene BVT0102_121600 + 0 NULL GK000017.2:36321953-36441358 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080072 1 XLOC_048956 NonCoding TCONS_00080072 XLOC_048956 NonCoding NonCoding - 17:36349123-36351276 - TSS60012 2153 1 TCONS_00080072_3 119 0.746864839758477 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.28285339068039e-07 0 0.00070076893126311 0.00161550330224143 0.000617657795510854 0 0 1.56666718668139e-07 0.000208954017374957 0.00114167784594289 0.000436051465550323 0 0 0 0 7.04626671562958e-06 0 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 1315 89.48 0.459823502090107 0 noncoding 0 0 0 0 0.0497394192024441 0.648051806452704 -0.00133185959439217 0.97963415197959 CTGTGAAGAAGGCTGAGTGCTGAAGAATTGATGGTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTACAAGGAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACCTTGGCCACCTCATGCAAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCGCTGACTCGATGGACATGAGTCTGAGTGAACTTCAGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCATTTCATGGGGTCGCAAAGAGTCGGACACAACTGAGCAACTGAACTGAACTGAACTGAACCAAAAGTCAAGAAAATGCATTGGAACACCCAGGAAGGAAGTAACGCATGAGATTAAAGATTAGCTCCAGATTGAACTGTAACAATCTCTAGCATTGACCACGGGGTAGAAAAAGAAAAGCCAGACAAAATGGGACCAAGTGGCCAATAAGGTGGGAAGGAAACCACAAAAGGCAGTATGGCCAAGAAGCCAAGAGAGGTTAATATTTCACAATGGAGATATGTTCCATAGACTAAAAATGCAATTGCAACTGAAAGATGAACTTTTTCATAAGTAACAAAAGGAGGTAGGCAAAATATGACTACAATTTATGGGTGGAAATTGTTTGTAAGATAGACATTTTACAGAGAACTTAGGGGAGCTTATCTAGACAGAAAACCTATAGAGCTGATTTTATTTTTTATGAATTAATAAATATGCAAAATAAAATTCTAAATTTCCTAAATTTGACTTAAGTTTTCTAGTGTTTCTCCTTAGTAGAATTAAAGTTCTGAGTAACAGCAAAGATAAATAACCTGCCTCTTGAGAAACCTATATTCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAGCAGACTGGTTCCAAATAGGAAAAGGAGTATATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAAACACTGGGCTGGAAGAAGCACAAGCTGGAATCAAGATTGCTGGGAGAAAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTAAAGAAGTAAAGTGCCTCCTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTTGGCTTAAAGCTCAGCATTCAGAAAACAAATATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGATGGGGAAACAGTAGAAACAGTGACAGACTTTATTTTGGGGGCTCCAAAATCGCTGCAGGTGGTAACTTCAGCCATGAAATTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGTCAACAAAGGTCCGTCAAGTCAAGGCTAGGTTTTCCCAGTCATCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAAAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTCTAAGGAAATCAGTCTTGAGTATTCATTGGAAGGCCTGATGTTGAAGTTGAAACTCCAATACTTTGGCCACGTGATGCGAAGAGCTGACTCTTTTGAAAAGACCCTGATGTTGGGAAAGATTGAAGGCAGGAGAAGGGGACAACAGAGGCCTAAATGGTTGGATAGCATCACTGACTCAATGAACATGAGTTTGAGTAAACTCTAGGAGTTGGTGATAGACAGGGAGGCCTGGCGTGCTGCAGTCCATGGGGTCACAGAGTTGAACACGACTGAGTGACTGAACTGAACTGAACTGAACACTACCATTGAATTATTTTTCTAAAATTACTAAAGCTTTTCAGCAATAGCTATAATTCTCAGTGGCAATTTTTATGGGACACACTAAGTTATTCAATGTCACAAATCAGTGTCAGCATTTTCATTAGAAGAAAATATGGTAGTTTGTTTACTTGTTACTCTACATCAAAGATGTAATTCTCTAACGTACACTTTTATTGCACTCTAATCATATTTTCTCTTCTATAAACTCCCACTTCAA TCONS_00077037 TCONS_00077038 TCONS_00077039 TCONS_00077040 . 5' 7446 TCONS_00077037 TCONS_00077038 TCONS_00077039 TCONS_00077040 . 5' 7446 EMBV3_43196 CTCAGAGGCCAAGTGTTTGGTGCAGTGGGAAGATTTATCTAGAGCCACTGTCTGGAGGAA Gene GeneID:616318|LOC616318:NM_001101253:81_cdna Constitutive 0 NULL GeneID:616318 26 GENE LOC616318 NULL Uncharacterized protein C10orf82 homolog EMBV3_39514 CCTCCAGCAGATCCAAGAGAAGACCACCTCCAACGATACTGCTATCCACTGACCTCCAAT Gene GeneID:510803|PGLYRP2:XM_002688558:209_cdna Constitutive 0 NULL GeneID:510803 7 GENE PGLYRP2 NULL peptidoglycan recognition protein 2 EMBV3_42118 CGAAAGGCCCAGCCAAAATAACGTAGGGATCCAGACTATAGAACATTCCCTGTGGGTCCC Gene BVT0102_069272 - 0 NULL GK000021.2:55689089-55770262 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121604 TCONS_00121609 TCONS_00121608 TCONS_00121594 TCONS_00121595 TCONS_00121607 TCONS_00121599 TCONS_00121602 TCONS_00121596 TCONS_00121601 TCONS_00121597 TCONS_00121603 TCONS_00121598 TCONS_00121600 TCONS_00121606 1 XLOC_073438 Coding TCONS_00121609 XLOC_073438 Coding Coding TP53BP1 21:55682742-55750487 = TSS90543 6110 1 TCONS_00121609_13 1966 28 0.910220831365139 0.00126183443120388 6.97142157823843e-07 1.85083083930612e-10 0.000375457385024917 0.0001248184536159 0.000550748465833938 0.000577801334825217 4.65848264670725e-05 0.000749553875945228 0.00158556220984229 0.000580166626460392 0.000562695335713966 1.2417086373724e-44 8.69179680571445e-10 4.61107012046919e-08 0.0025229601457542 3.30972635478911e-06 0.00126741286255541 0.000396688709155372 3.0647074230792e-09 7.12779430330931e-26 0.000880298912279315 3.48034268785211e-09 1.38401832531953e-05 0.000845733374006848 4.52659371206574e-16 5.06979768591649e-06 0.0013265280330551 0.000521267016535176 0.00107732874228498 NM_001206397.1 TP53BP1 Bos taurus tumor protein p53 binding protein 1 (TP53BP1), mRNA. 0.0 1.102e+04 100.00 0.999836333878887 NM_001141980.1 TP53BP1 Homo sapiens tumor protein p53 binding protein 1 (TP53BP1), 0.0 8148 89.36 0.999509001636661 TCONS_00121609_13 sp|Q12888|TP53B_HUMAN TP53B_HUMAN Tumor suppressor p53-binding protein 1; 0.0 3304 87.28 0.996948118006104 0 coding 0 0 1 1 1.54178945322414 0.0480717888324298 -0.0127561030074644 0.78196000514739 CGGAAACCTCTAGGACGAGAGCGAGGGACCTCCCGCCGGGATGCCTGGGGAGCAGATGGACCCTACTGGAAGTCAGTTGGATTCAGATTTCTCTCAGCAAGACACTCCTTGCCTGATAATTGAAGATTCTCAGCCTGAAAGCCAGGTTCTAGAAGATGATTCTGGTTCTCACTTCAGTGTGCTAGCTCGACACCTTCCTAATCTTCAGACGCACAAAGAGAACCCTGTGTTGGATGTTGAGTCCAATACTGAGCAAACAGCTGAAGAAGAACAAGGAGACAGTAAGAGTGGCTTCAATGAGCATCTGAAAGAAAACAAAGCTGCAGACTCTCTGGATTCTTCTCATTTGGACACACGTGGTTCCATCAGTCAGGTCATTGAACAGTTACCTCAGCCAAATAGGAAAAGCAGTGTTTTGGGAATGTCAGTGGAATCTGCTCCTCCTGTAAGTGAAGAGAAGGAAAAAGAGGTGGAAGAGAAGGAGAAAGAGGAAAAGGAAGAAGATATTCCAGATGATACCACACACTCCCTTAGTGCTGAAGATCCTGCCTCATCACAGATGGGCTTTGGGGTTCTGGAACTCTCCCAGAGCCAGGATATTGAAGAACAAACTGTGCCATATGAAATAGACAGAGAGCCTCTACAGTCAGTAACCACCAACTCTGGATATACTCGGCTATCTGGTGTGGATGCTAATATTGCAATTAAGCATGAAGAACAGTCTAATGAAGATACTCGCGTGGCAGAACAGCCCAGCAAGGATGTCCCTGTGGTGGAAGAGCAAAATGCACCACCTGAAAGGTCAGAGGACATGCCTTCTAGTCCCACAGTGTCTGCTGCTATGGAAGCAAAAGAACAGACTTCTGCTCAAGAACTTCCAGAAGGTGGGATGCAGGTTCAGAAGTCACCAGAGCCTGAGGTTTTGTCAACCCAGGAAGACTTGTTTGATCAGAGCAATAAAACAGTGGCTTCTGATGGTTGCTCTACTCCTTTAAGGGAGGAAGGTGGGTGTTCTCTGGCCTCCACACCTGCTACCACTTTGCACCTCCTGCAGCTCTCTGGTCAGAGATCCCTTGTTCAGGAGAGTCTTTCCACGAATTCCTCAGATCTTGTTGCTCCTTCCCCTGATGCTTTCCGATCCACCCCCTTTATCGTCCCTAGCAGTCCCACAGAGCAAGAAGGGAGAAAAGATGAGCCAATGGATATGTCAGTGTTATCTGAAGGAGGAGAGTCTTTTCAGAAGAAACTCCAAGGTGATGAGCCAGCAGAGATGGAAAACCCCCCTCTCCCCACTGAGCCCACTATATCACCACAAGCCTCGACACCAGTATCTCAGAGCACACCAGTCTTCACTCCTGGTTCACTTCCTATTCCGTCCCAGCCTGAGTTTTCTCATGATATCTTCATTCCATCTCCAAGTTTGGAAGAACGATCAAATGATGAGAAGAAGGGTAGGGAGTTGCATAGTTCAACTTTGACTGTTGAGTGTTCTAAAGCTTCAGAGACTGAACCAAAGAATTCCACTGAGGATCTTGGACTTTCTTTGACAGGGGATTCTTGTAAGTTAATGCTTTCTACAAGTGAGTATAGCCAGTCCCCAAAGATGGAGAGCTTGAGTTCTCACAGGCTTGATGAAGATGGAGAGAACACACAGATTGAGGATACTGAACCCATGTCTCCTGTTCTCAATTCTAAACTTGTTCCTGCTGAAAATGATAGTATCCTGCTTGATCCTGCACAAGAGGGCCAAGTAGAACTGAATCAGAATGATGACAAAGCAAAGGGGGACAACATAGGAACCAGGGTTGACATTAGTATTTTATCTGCCGCTTGCAAAGGCAGAGAAGAACCTGTAGCGGAAGACGTTTGTATTGATCTCACTTGTGATTCAGGCAGTCAGGCAGTTCCCTCTCCAGCTACTCGATCTGAGGCACTCTCAAGTGTGTTGGATCAGGAGGAAGCTATAGAAATTAAAGAACATCATCCAGAGGAGGGGTCTTCAGGGTCTGAGGTGGAAGAAATCCCTGAGACTCCTTGTGAAAGTCAAGGAGAGGAGCCCAAAGAAGAAAATATGGAGAGTGTCACATTGCATCTTTCTCTGACTGAAACGCAGTCTCAAGGGCTGGGTCTTCGGAAGGAAGTCCCCAAACAAGAATGCCAGGAAGCTATGGAAGTTGAAACCAGTGTGATAAGTATTGATTCTCCCCAGAAGCTTCCAGTACTTGAACAGGAATTGGAACATAAGGATCAGGAAGCATGGGAAGAAGCTACTTCAGAGGACTCGAGTGTTGTCATTGTAGATGTGAAGGAACCATCTCCCAGAGTTGATGTCTCTTCTGAACCTTTAGAGGGAGTGGAGAAATGCTCAGATTCTCAGTCGTGGGAGGATGATGCTCCAGAAATAGAACCATGTGCTGAGAATAGAGTAGATATCCAAGAAGAAAAGAGTGCAGAGTGTGAAGGAGATCGGAAATCAGTGACTGCAGAAAAAGAATCTGTAGAGGCAGACTCTCCACAGCCTCCTTTGACTTTAGTGAGAGCAGATGGTACTCTAGGACCTGAGCAGGAAATGCAGCAGACCCAACCACAAGAGAGAACCGATAGCACATTAAGGGAAGACTCAAAAGTGGCTAATGCAGAGCACGTGGACTCAGGTGTAGAGGCCCAGCAACTGGAGAAAGCCTCTGCCCAGGCTTCACAAAGCTTCTGTGAAAGCTCTAGTGAAACTCCATTTCATTTTACTTTGCCTAAAGAAGGTGATATTATTCCACCATTGACTGGTGCAACTCCACCTCTTATTGGGCACCTAAAATTGGAGCCCAAGAGACACAGTACTCCTATTGGTATTAGCAACTATCCAGAAAGCACCATAACAACCAGTGATGTCATGTCAGAAAGCATGGTGGAGACCAACGATCCCATACCTGGGAATGAAAAAGGAGATTCTGGGGCTGCCCCAGAAATGGGTGATCAGTTGTGTCTGAGAATGAAATTGGTCAGTCCTGAGACTGAGGCAAGTGAAGAGTCTTTGCAGTTTAGCCTGGAAAAGCCAGCAGCTGGTGAAAGGAAAAATGGATCTACTGCTGTTGCTGAGGCTGTTGCCAGTTCCCAGAAGACCATGTCTGTGTTTAGCTGTGTCTGTGAAGCCGGGCAAGAGGATGAGGCTCGAAATCAGAATTCCTCCTCTGCACCCATCAGGGGAAACTTGCTCCATTTTCCGAGTACTCAAGACGACGAGGAGAAGGGAAAGTTCGAAGGTGACCAAGGGACCAGGCAGAGTCAACAGCCCACGAAGCCCAGTAGTCCTGTCAAAGAGCCTGCTGCTCCTATTTCCCAGCAGATGGCCACACAGGAGCCATCCAGTCCTCAAGGGGAAGCAATGGAGATAGATACGCCAGAAGGCCAGAAAGGAGCATGGAGTACCAGTCAGGAGAAACCTAGTAAGGCCTTGATCGAAAGGCCCAGCCAAAATAACGTAGGGATCCAGACTATAGAACATTCCCTGTGGGTCCCAGAAACTGTTTCAGCAGCAACTCAGACTGTACAGAATGTGTGTGAACAAGGGACCAGTACAGTGGACCAGAACTCTGGAAGACAAGACGCCACAGTTCAGACGGAGAAGGGGACTGGTGAGAGAGCAGTCAGTGCTCCTGGGGATGATACAGAGTCGCTCCACAGCCAGGGGGAGGAAGAGTTTGATATGCCTCAGCCCCCGCACGGCCACGTCTTGCATCGCCACATGAGAACAATCCGTGAGGTCCGCACACTTGTCACTCGTGTCATCACAGACGTGTATTACGTGGATGGAACAGAAGTAGAAAGAAAAGTAACTGAGGAGACCGAAGAGCCGATCGTAGAGTGTCAGGAGTGTGAAACGGAAGTCTCCCCTTCACAGACCGGCGGCTCCTCGGGTGACCTGGGGGACATCAGCTCCTTCTCCTCCAAGGCGTCCAGCTTACACCGCACGTCAAGTGGGACGAGCCTGTCTGCCATGCACAGCAGCGGCAGCTCAGGGAGAGGAGCCGGACAGCTCAAAGGGAAAACCAGCGGGACAGAACCTGCCGAGTTTGCCTTGCCCAGCTCCCGAGGAGGCCCAGGAAAGCTGAGTCCTAGAAAAGGGGTCAGTCAGACAGGGACGCCAGTGTGTGAGGAGGATGGTGATGCGGGCCTTGGCATCAGACAGGCAGGGAAGGCTCCAGTCACACCTCGTGGGCGCGGGCGAAGGGGCCGCCCGCCTTCTCGGACCACTGGAACCAGGGAAACAGCTGTGCCTGGCCCCTTGGGCATAGAGGACATTTCACCTAGCATGTCGCCGGATGATAAATCTTTCACCCGTATCGTGCCTCGAGCGCCAGACTCCAGCAGACGGGCAGACTCGGGTGCTGGTGCTTTGCGTCGAAGCGACTCTCCCGAGATTCCATTCCAGACTGCTGCTGGCCCTTCAGATGGCTTAGATGCCTCCTCTCCAGGGAACAGCTTTGTAGGGCTCCGTGTTGTAGCCAAGTGGTCATCCAATGGCTATTTTTACTCTGGAAAAATCACACGAGATGTCGGAGCTGGGAAGTATAAGTTGCTCTTTGACGATGGGTATGAGTGTGACGTGTTGGGCAAAGACATCCTGCTGTGTGACCCCATCCCCCTGGACACGGAAGTGACCGCCCTCTCGGAGGATGAGTATTTCAGTGCAGGAGTGGTAAAAGGGCACAGGAAGGAGTCTGGAGAGCTGTACTACAGCATTGAAAAAGAGGGCCAAAGGAAGTGGTATAAGCGGATGGCTGTCATCTTGTCCTTGGAGCAAGGAAACAGGCTGAGAGAGCAGTATGGCCTGGGCCCGTATGAGGCAGTAACGCCCCTCACCAAGGCAGCAGACATCAGCTTAGACAATTTGGTGGAAGGAAAACGGAAACGGCGAAGTAACATCAACTCCCCAGCCACCCCCACCACTTCCAGCAGCAGCAGTACAACCCCGACTCGAAAGGTCACAGAGAGCCCTCGTGCCACCACGGGGGTCCCCTCGGGCAAAAGAAAGCTTGTCACTTCTGAAGAGGAGCGGTCCCCTGCCAAGCGAGGCCGGAAATCTGCCACTGTGAAACCTGGTGCGGTGGGGGCAGGAGAGTTTGTGAGCCCCTGTGAGAGTGGCGACAACCTGGGTGAGCCCTCTGCCCTGGAAGAGCAGAGAGGGCCTCTGCCCCTCAACAAGACCTTGTTTCTGGGCTATGCCTTCCTCCTCACCATGGCCACGACCAGCGACAAGTTGGCTAGCCGCTCCAAATTGCCAGATGGTCCTACAGGAAGCAGCGAGGAAGAGGAGGAATATTTAGAAATTCCTCCTTTCAACAAGCAGTACACAGAATGCCAGCTTCGAGCAGGAGCTGGCTACATTCTCGAAGACTTCAATGAAGCCCAGTGTAACACAGCCTACCAGTGTCTCCTAATTGCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTCCTTGTGTGTCTCATGTTTGGGTCCATGACAGCTGCCATGCCAACCAGCTCCAGAATTACCGCAATTACCTGCTGCCAGCTGGGTACAGCCTTGAGGAGCAAAGGATTCTGGATTGGCAACCCCGTGAAAACCCTTTCCAGAATCTGAAGGTACTCTTGGTATCAGACCAACAGCAGAATTTCCTGGAGCTTTGGTCCGAGATCCTCATGACTGGGGGGGCAGCCTCTGTGAAGCAGCACCATTCAAGTGCCCATAACAAAGATATTGCTTTAGGGGTGTTTGACGTGGTGGTGACGGACCCCTCATGCCCAGCCTCGGTGCTGAAGTGTGCTGAAGCGTTGCAGCTCCCTGTGGTGTCACAAGAGTGGGTGATCCAGTGCCTCATTGTTGGGGAGAGGATTGGATTCAAGCAGCATCCAAAATATAAACACGATTATGTTTCTCACTAAGGATACTTGGTCTTACCGGTTTTATTCCCTGCTGTTGTGGCGATTGTGTTTTAACCAGGTTTTAAATGTGTCTTGTGTGTAACTGGATTCCTTGCATGGATCTTGTATATAGTTTTATTTGCTGGACTTTTATGATAAAATAAATGTTGAATCTCTTTGGTTGTAGTAA EMBV3_38265 TTCTATGTCTTTTTAATCAAGTCCAGAAACTTTTCATCAGTTGCTCATTTTTAAGGTCTG Gene GeneID:615255|GMFB:NM_001101237:131_cdna Constitutive 1 NULL GeneID:615255 10 GENE GMFB NULL glia maturation factor, beta EMBV3_11767 CCCTTTCTCCTGCTCTCAATCTTACCCAGCCTCAGGGTCTTTTCCAGTGAGTCGGGTTTT Gene GeneID:100139764|LOC100139764:XR_083958:112_cdna Constitutive 0 NULL GeneID:100139764 18 PSEUDO LOC100139764 NULL similar to WW domain binding protein 4 EMBV3_25121 TTGTTTGACCTGACTTACAAGCAGCGGCCGTACACCTTCCTCTTGCCTAGAAAATGCCAC Gene GeneID:789937|WDTC1:XM_002685693:356_cdna Constitutive 0 NULL GeneID:789937 2 GENE WDTC1 NULL WD and tetratricopeptide repeats 1 EMBV3_22919 GAGGATGAAGAAGACGAAGTCGTCAATGAGGGTACCCCTTGTGCTGAGCAAATTAAGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00526 AGGCATGGACTTCTTCCCAGCCAAACGTGCAAGTGATAGGAGAAAATTTGTAGACCCGGC Gene BVV0102_067987 + 0 NULL GK000004.2:119362610-119431677 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185524 1 XLOC_111612 NonCoding TCONS_00185524 XLOC_111612 NonCoding NonCoding - 4:119409049-119410331 - TSS137912 1186 1 TCONS_00185524_1 106 0.159359190556492 2 0.0757220921155347 0 0 5.46188502363298e-05 2.10054150543319e-05 0 0 0 0 8.64854116103491e-05 3.12229702226154e-05 3.86034681671112e-06 0 0 3.60569872336511e-07 0.000289573486046291 6.68086166058394e-05 0 0 0.000259991451476216 0.000406261590814615 0 0 0.000100558679995354 0 0.000502402081692676 5.94052501064451e-06 0 0.000421137196101651 0.000135077460736732 0 XM_611595.6 LOC515917 PREDICTED: Bos taurus pancreatic trypsin inhibitor-like (LOC515917), transcript variant X2, mRNA. 1e-39 168 80.20 0.163575042158516 0 noncoding AAACACCCTGAACGTTAGCCAATACTCCATCTGTAAAGAGCGGTCTGTGAAACAACAGGGAAGATCTTCAGCGATGAAAGACATTGTACAATAAGTGTTAGCTCCGATGGCGGTGCTGCCGGACGGTACTTCAGTGGAAGAAGATTCCAAAAGGGAACCGCAAGCATTTGCATTTGCAGAGGCGTGGGGGGAAGGGCCTCGGGCTGGTAACCTGGTAGGAAGGGAAGCCCGGCCAGGACTAACTTGCAGTTTGCAGGTTGGAAGGAAGAGCAGGGAGACCGACTTTGGCTCCCCATCTGTAAAATGGGGATATGGACTTCCTGGGAAGGGTCACTGTCTGCGCTGGGCTCTGTGCCTATCACATAATGATACTCAGGAAATCATAGCTCTTCTTTGTCGAGAAACTTCTGCCTCTTTGAGAAACTGATAAAAAGGCATGGACTTCTTCCCAGCCAAACGTGCAAGTGATAGGAGAAAATTTGTGGACCCGGCACACGCACACAGGCACCCTGCCCGAGCCCAGGAACCAAAGATGAAGGTCCTCAATGACAGCTTGGCAATTTTCACTATCCTGAAAAATTAATCTCTGATAGAAGAATAACATTTGTAAATAATTTGCCCTGAGGTAATAAATTCAAGAACAGAAAATGAAAGAAAAAAGAACGTACAAGGTTACTGATATCGACTCTGGAGATAATCTGTTCCTCATCAGGAATACTTTGCAAGCCATAAAAATAATAATGTAATTATGCTTACTAACATCGAATGGATCCAGCTTGCATTATTGAGACATTCTTGGTTATGATGAAACTCCCTATAATGAAATACAAAAGAGAAAAATAAATACAGGTTTTATTAACATGTATATTCTCAGTTGTGTCCCTCTCTTTGCGACCCCATGGACTGTAGCCTGCCAGTCTCCCCTGTCCATGAGATTCCAGGCAAGAATAACTGCAGTGGGTTGCCATTTCCGCCTGCAGGGATCTTCCTAACCCTGAGATGGAACTGGAGTCTCCAGCATTGCTGGCAGATTCTGTACCACTGCCACCTGGGAAGCCCCTCAGAGGGAGGAAGATGCAGATACAAACGGAGATTTCTCTTATAAATGCAAATTTCCCCCACAAAAGGGTAAAGTTTGATTCTGTTCTCAGTTTCTCCTGCTCCTGCAGTTTCTCAAAAATAAAGG TCONS_00183044 r 5' 3708 TCONS_00183044 r 5' 2820 EMBV3_22067 GTTTTGGTGACATTGCTTTGGTATAAAATCCTAAGATCATAGCTGGTATTCATGTCAAGG Gene BVT0101_049736 + 1 EMBV3_19906 GK000007.2:43707018-43739526 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20123 ATCGATGGAAAAATCCGTATCTGTTCTCGTTAAAGTCAGGAAGCAAGGAATCTACCTGAC Gene GeneID:512318|SLU7:NM_001166617:19_cdna Constitutive 0 NULL GeneID:512318 7 GENE SLU7 NULL SLU7 splicing factor homolog (S. cerevisiae) EMBV3_26586 AGGAGTGTGTGAAGATGGCCCACCGAGCAGGTACCTGACCCGCTGGTCTCCCCGCTCCGT Variant GeneID:614102|MRPS18A:NM_001101229:350_cdna 387^456 2 EMBV3_34569 GeneID:614102 23 GENE MRPS18A MRP-S18-3 mitochondrial ribosomal protein S18A EMBV3_16752 TGGCGCAGCAAAGGGGGAGCGTGCTTTCCCCATGAAGGTATATCTGTGTCTATGTGTGAA Gene GeneID:508141|KDM4B:XM_002688920:88_cdna UTR3_Alt 2 NULL GeneID:508141 7 GENE KDM4B JMJD2B lysine (K)-specific demethylase 4B EMBV3_25038 ATGCAGCAAGCCCCAGCATTCAGCCAGGACCTTACTTGTTCATTCAGCACCCTCTACCAT Gene GeneID:534169|SPATA6:NM_001046371:224_cdna Constitutive 1 NULL GeneID:534169 3 GENE SPATA6 MGC127957 spermatogenesis associated 6 EMBV3_32699 GTCCATGCACATGTTAATTGAGGGAACATGATATATGCACAGAGTGGAGTACTACAAAGC Gene BVT0102_048556 + 0 NULL GK000030.2:118919276-118980593 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253823 TCONS_00245574 TCONS_00253812 TCONS_00245588 3 XLOC_156761 XLOC_150763 XLOC_156750 Coding TCONS_00245574 XLOC_150763 Coding Coding LOC100337176 X:118679916-118954216 o TSS184316 576 1 TCONS_00245574_2 58 0.272569444444444 2 0.997907393027317 0.00579536460280779 0.00138753239698828 0.00296519983781252 0.00418677430129132 0.00131894033956026 0.000722939668281962 0.000780015318748408 0.00267218918992998 0.00152970684853335 0 0 0 0.000202143561835689 0 0.000314793996596458 0 0 0 0.00410946956927855 0.00216004414397208 0.00128812699181849 1.14391645495187e-05 0 0 0.00279105409530931 0.00303561426188693 0.000510733520674589 0 5.91722128299255e-06 0 XM_005200815.1 MAGEB18 PREDICTED: Bos taurus melanoma antigen family B, 18 (MAGEB18), 1e-28 131 80.27 0.251736111111111 NM_173699.3 MAGEB18 Homo sapiens melanoma antigen family B, 18 (MAGEB18), mRNA. 1e-27 127 76.34 0.315972222222222 TCONS_00245574_2 sp|O15480|MAGB3_HUMAN MAGB3_HUMAN Melanoma-associated antigen B3; 3e-07 46.6 66.67 0.551724137931034 0 noncoding AAATTGTACTCATTCCTTTTTATAGCTTTGTAGTACTCCACTCTGTGGATATATCATGTTCCCTCAATTAACATGTGCATAGAGTGGAGTACTACAAAGCTATAAAAAGGAATGAGTACAATTTTGTAAACTAATATGGAGTGCTTCCATGATAGATATAGATATATAAAAGAATGTGGGAGTTTGGGGCTAATGTCAATGATACCAAGTCAAGTGCCTTCCCATTCTGGTATGAAGAGGCTTTGAGAGCTGAAGAAGACAGAGCCAGAGCCAGAGCTGCAGCCAGGGCTCCTATGGTGCCAGGGCCAGTGCACTTTCCTGAGCATGTCCAAATTTCCTCCCACCCCTAGTGAAGTCTGAGCAGATATTTCACATTGCATTTCAAGAAAGCAGGCAAACTTCCCACTAGTGGAGGGCCACGGTGGGGCTCATGGAAATTCAGCGTATAAGGTATTTATTTGTGTTCCAATACAATATGCACAAATTGGAGGTTTTTCTTTTTTCTGTTTTTAAATATTGTTCCTTTTAATTAAAGATGTGTTTAGCTTCAGATTCCAAGTACACTAATGGCACACC TCONS_00248124 r 5' 4533 TCONS_00248124 r 5' 4533 EMBV3_25836 GGTGAAGGACACATGTCTTCTAGTTCTGCCTTTTTAAGTTTTTGTTCATGATGGATATGA Gene GeneID:614540|TIAL1:XM_002698539:32_cdna Constitutive 2 NULL GeneID:614540 26 GENE TIAL1 NULL TIA1 cytotoxic granule-associated RNA binding protein-like 1 EMBV3_29521 AGCATCAAGGCCTCCGAGCAGGTCCTCAGCCTGGTGGCGCAGTTCCAGAAGAACAGCAAA Gene GeneID:512341|MLYCD:NM_001098946:32_cdna Constitutive 0 NULL GeneID:512341 18 GENE MLYCD MGC152286 malonyl-CoA decarboxylase EMBV3_32114 ATGAGGAACAGTTATGGGACGTGGTCGGAACTGATGCACGGAACCTGAAACCACCCTTCT Gene GeneID:616337|PPAPDC1B:XM_002698735:202_cdna UTR3_Alt 2 NULL GeneID:616337 27 GENE PPAPDC1B NULL phosphatidic acid phosphatase type 2 domain containing 1B EMBV3_43287 ATACCCCACTCCAGCGAGGTCTAAGAAGACAATGTTGGTCCCCAAGAACATCACCTCGGA Gene GeneID:280749|CGA:NM_173901:2_cdna Constitutive 0 NULL GeneID:280749 9 GENE CGA NULL glycoprotein hormones, alpha polypeptide EMBV3_04129 GCCTTCCTTGACCATCCATCATAGTGTATCTGTACCTCACTCAGACAGGAGGGCAGAACC Gene GeneID:617493|AIF1L:NM_001078079:214_cdna Constitutive 0 NULL GeneID:617493 11 GENE AIF1L C9orf58 IBA2 allograft inflammatory factor 1-like EMBV3_15916 CGCCACCCAGACCTGCAACAAAGTGCGATGCGCGGTGCCCGGGCGTCGGCAGAACACCAT Variant GeneID:513446|BANP:NM_001075620:225_cdna 453^569 1 EMBV3_01584 GeneID:513446 18 GENE BANP MGC139655 BTG3 associated nuclear protein EMBV3_38148 CGTCACCTTGCGGTGCCCTTCTATCTGCTTGTGAAACGTGTGTGCTACCTCCAGAGGAAT Gene GeneID:514336|PWP2:XM_002685144:99_cdna Constitutive 0 NULL GeneID:514336 1 GENE PWP2 NULL PWP2 periodic tryptophan protein homolog (yeast) EMBV3_14311 CCTTTCCCCAATTCAGGGCTCTGAGACCCAATCCCGCTTCAACGTAGTCTTGTCTCCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28111 ACATCACCCAGGTTGTCATCCTGTCAGCTGTTTCTGGTGTTATCAGTGACTTGCTTGGAT Gene GeneID:520774|PHTF2:XM_002686770:79_cdna Constitutive 1 NULL GeneID:520774 4 GENE PHTF2 NULL putative homeodomain transcription factor 2 EMBV3_38340 ACGCGGTGAAGCTGGAGCGGATGCTGAGAGAACGAATGTTCAGCGCAGAGAATGGAAAAT Gene GeneID:513453|TALDO1:NM_001035283:272_cdna Constitutive 5 NULL GeneID:513453 29 GENE TALDO1 MGC133714 transaldolase 1 EMBV3_33275 ATCAATGACCTGGTGAAGAAGTACAGGCTTTCTCGCGCTTTTGTCCGGCCCTCTGGTACA Gene GeneID:505648|PGM3:NM_001045922:47_cdna Constitutive 0 NULL GeneID:505648 9 GENE PGM3 MGC137106 phosphoglucomutase 3 EMBV3_39162 CCTGTGGTGATACCAGTGGAGAGAAGTGGCATGCGGGGATGGTGTAAGAACTTGCAGAAT Gene GeneID:513859|PPP1R3F:XM_002700081:168_cdna Constitutive 0 NULL GeneID:513859 X GENE PPP1R3F NULL protein phosphatase 1, regulatory (inhibitor) subunit 3F EMBV3_31375 CGAACCTTGCTCCTGATGTGGACTTGACCCCTGTCAACGAACCCAAGAAGAAGAAATACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38572 TGGGCTATGCTAAAGGCAAGAGTGGAGGCATTAGGCAGGTGAGATGTGAAGAGGCAGTGT Gene BVT0102_044167 - 0 NULL GK000030.2:58998386-59453573 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244509 TCONS_00244511 TCONS_00244506 TCONS_00244507 TCONS_00247095 TCONS_00244510 TCONS_00244512 TCONS_00244508 TCONS_00247093 TCONS_00247094 TCONS_00247092 2 XLOC_150485 XLOC_151225 Coding TCONS_00247095 XLOC_151225 NonCoding NonCoding - X:59122986-59127153 - TSS185125 3490 3 TCONS_00247095_1 70 0.134670487106017 3 0.162986077772444 0.00310444116910696 0.00196946830362597 0.00158452335179865 0.00125805242784143 0.000838260654702069 0.000161198712043406 0.000273779678542124 0.0013391634888352 0.000342156688190743 4.99889455495632e-05 1.66630237372201e-41 2.13088802361077e-54 5.91015484929238e-06 1.28775894986968e-05 0.000217045316424222 0 1.20689387019484e-42 0 0.00142042740074011 0.00172499380608446 0.00123451798685989 3.43998819975844e-98 1.67333493594738e-16 0 0.0014056015614623 0.00124627112528789 0.00309754117400502 6.39071158446827e-64 1.38842744415098e-11 2.01730431240125e-05 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 3e-109 401 92.39 0.0787965616045845 NM_017416.1 IL1RAPL2 Homo sapiens interleukin 1 receptor accessory protein-like 2 (IL1RAPL2), mRNA. 7e-98 363 74.03 0.17163323782235 0 noncoding 1 1 1 1 -0.159597196171934 0.222944391738337 0.0683760527246117 0.328864808901059 CCTGTCTGAGTCTTGCAAAACAGCCGGGGCGTCCAGCGGGGCTCAAGCCTGCCGTTCCATGTCGGGGCGATCACAGTCCAGGATGAGATAGAGAACTAGGTTGCAGAGAGCCTGGGCTCAAGCTTCCCAGGCGTCAAGGGAGGCTGCCCGAACGCGAGGGGCCCGGAGGAGGCGCAGGGAAGACGGTTGCTTCCAGAGCAGCCAGACAGGGCAGCCCCGCCCGTTTTCTCCAACTCCCAGTCCTAGCCAAAGAGGATGCTAGAAAACTTCTCCGCGCCCAAGGAAGACTTCTAGAGTTCGGCAGCGCTTCTGTGGACTTTAGGGGGAGCTGACCAGGGAGAGGTTTAAAGAGGGCTCCTAAATCACTGAGCCGCTATGCTGGAAACCAGGTGCCTCCTCTTGGCTCCGTGGCCAGAGTCTCCTAAGTCTCCTGCCTCTCAGCCTCTTCCTTCTCCAAGACTTTGCTTCGGAGCAGCCTTACTCCAGCCCCACCTCGTCTTGGCCAAAGGGTGCACGGTGGGAAGCCGCCGCGTCGGCCCGTGGCCCCTACACCCCTCACGAGGCACGCTTGCCCCAGAGGTCCTATAAGCCCTGGCGGCAGTGCAGGCAGCAGGTATGAACTCTGCCTGCCCGCCTCTCTCCTGCCGGTTCGCGGCTCCAACCTTATCTGGGAACCTTCTCCAGCCAGTGCACAAAAGCCTATATTATCTCCCCTAGCTCCGAAGAAGGAGCGGTACTCGGGAAGTGCGCTCCAGGCTTGCCTCACATCCTGCCACCGCGGCTGCCGCCTCCAGAATTTGCCTAGAGCGGGGGTAGGAGGGCAGTGGAAATCACCTACAGCTGCGTCTCGGTCGCTAACAGTTTGGTGCCTCCGGGCTGACTGATTACACCGGGGAGGAGGAGGGGATTAGAGAGAATAGCTCCGGCGCGTCACGGAAAAGGGTTACTGCTGCTCCTCCTCCTCTTCCACACCCCTTTGGATTCCAATCCCGAGTTCCCCCATCCCCTGGTTAAAAAGAGAGAGAGAGAGAGAGAAAAGCACTTCCCTCTTACCTTTCCCGGGAGAAAGTGCGTCCCAGCAGCGCCGTCTAGCGTCTTTACCGGAGTACGCCAGCCTAAAGGGTTAGGCCGAGCGCGGAACCCAGTGAGTGAACGCAGGAAAAACCGCTAAGCAAAGTTTGTCAACTATCCTGATCCCCAGTTCCACCCGTTGAGCAGCTCTCTCCAGCTGTTCTCCTGAGGCTACTCCATCGCTCTGCATTAGCTGCGGAGAGTGACACGAGCGAGAGAGCCAAAGACTGAGACAGAGACCGGAATCGACAGCTAGCAACAGAGCGTTCTGTGCGCGCGGCGAGCCGTGCGGACCCACACCTTGCTTCAGCTTCCGTGACTATTTGGCCTCGATCCACTATCCCCTGGACTTTTAAGGCCGAGACTGTGCACAACTAAAGTTACCGTCCCTGTCTCACTTCTCATGACAAGTTTATTAATTCTTTTTTCCCATTGACCATCTCATAAAATTTGGCAGAACCCCACCCTGGAAAATTATTTCTGCAATTGGTTAGGTCCGGGGATCGAGAGAGGTCAGGTGTGGAAGAAAAGGTCCTTTTGGCAGGAACCAAGTTATCCTCCCAGATACAAGCTCAGTCTTCCGATGGGGACTAGAGAGCCAGTTTTCCCTTGCTCTTTGCTATAGAGCTCATATAAACGTCCTTCTGCCTGAGTGCCTGCCCTGAGCAATCCGGATCACCACTTCCAGCCATCCAGCTGCACCTGCATTAATGTTATTCCGGCTCAACGTAAAGTGCTTCCAAAAAGCTGGGAACTGCAGCAACTCAGGGTGGAAGAACACTGCCTCTTCACATCTCACCTGCCTAATGCCTCCACTCTTGCCTTTAGCATAGCCCAAGCCCTCATGCCCTGGGCCCTAGCTGAGCAGCTAGGCTGTCTATAGGTGAGGCCAACTGGCCAAACCAGGAGAGCTCTCATTTACATATGAAGGTGTTAAGGAGCCAGCAGCCAGGACAAAGGGAGCTAACCCAGGGTAGCAGCCAATAATAAATATCCCTAAGCAATTTGTCAAGTAAACAAGAGATTTTAAAGAAATAACAAGAAACAAACAAACCAAAAATCACCTAGAAAGCACTGTTCCTGTGGAGCCCTTTTATCATCTTTTATGTCCAATTCCACCTAACTTCACTCTAACACTCAGTGCCTTTTTGTATCCAAGTTCTATGTCTCCTGCCCTATCAAAACTCACTCTCCCATGTACCTACCACTCTTTCAGTACTCTTCCTGCTGATGACAATGTGTCGGTGTTCCAGTCTGATAAATACCTAACTAGTCTAGCTAACCTTACTCCCCTGGGTAATATCATCCTTCACCAGAGGCTTTGAGAAGATTTTCCAAATTTGAGGAATTCAGGCACTATGGCAGATTTTCTTTAGATGGAGGAAGGGCTCTTGGTACCCATTAAAGAGGGCTGCTGTTTGGCCTATTCAGCAGTTCTGGCTTATGGTTAAATGAAGTTATTGCAATAGAGTCAAGGAATATAGGAATAAGGAGATCAAACAGGAACAAAATGCCAAGAAGATGGGGAAGGAACCACTGACTTCTCAAAAATAATGTCTGGGACCTTGCTCCTCAAAGTGATATCCATAACCAGCAGCATTGGGGCATCACCTGGGAGCTTGCTAGAATTGCAGAATCTTAGAACCCAGCCCTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTGGGCTGCAGTCCATGAGGTCGCTAAGAGTCAGACATGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTAGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACAGAGGAGCCTGGTAGGAGGCTGTCTATGGGGCTGTCTACAGAGTCGGACACAACTGAAGCGACTTAGCCGCAGCAGCAGACCCCAGCCCCAGAACTACTGAATTAGAAACTTCACAAGTTTCTTAACAAGAAACTTAACAAGATCCTCAGGTGACCGTAAACACATACTAACAATTGAAAAGCATTTTAAAGAAAACCTTTCAACTCTGCCTCGTCCAGGAGAGGAAAAGGACAGTTAGTGTAATCACCTAAGGATCTAAAAATAGGGTCTGGCACCACCATTGTCAGATGATAAACACCACAGAACAAGGCCAGAAATGAGGCCCAATATATATCAAGTTATAGTTAGCAGCTCTACCTACAGACAGCCTGTTTGCAAAACTGTCCTTAGTTACATGAAGAAATAGATGAGAATGTGTCATAGCTTAAAATAATTCTATCACTACCACTGAACAAACAGATCGATTCCCATGTTCCACTAGAGGAGGGTCAGTATCATCTATTAAGAACAGGACTTTACACAGTTCAGCAAATTATGGGTACTCAATATATGCTCGCCGATTAATGGT TCONS_00244505 r 3' 124602 TCONS_00244505 r 3' 126456 EMBV3_02835 TGGAGGTCCAGCACAAAGCCGACATATTCAAGCGGCAGATTATCCAGAGGAGACAAAACC Gene GeneID:517699|CATSPER2:XM_002696808:567_cdna Constitutive 0 NULL GeneID:517699 21 GENE CATSPER2 NULL cation channel, sperm associated 2 EMBV3_35866 ACTGAATCGTCCAGTTGAGTAAGTTGTCTAGTATACAAGGCCCAGGTGGACAGAGGGGTC Gene BVV0102_075419 + 0 NULL GK000012.2:28688201-28690890 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035007 TCONS_00035006 TCONS_00036630 TCONS_00036622 TCONS_00036625 TCONS_00036621 TCONS_00036623 TCONS_00036624 TCONS_00036629 2 XLOC_020806 XLOC_021190 Coding TCONS_00036630 XLOC_021190 Coding Coding BRCA2 12:28678684-28690651 j TSS26615 2558 1 TCONS_00036630_5 241 0.0203283815480844 10 0.787063346147418 0.0056542868191964 0.00408768458283306 0.0041076517205382 0.00299204006392717 0.00628672952876043 0.00233377476247332 0.00255266308988167 0.00228292135784707 0.00392944772258771 0.000160588060546684 5.14504238748229e-112 0.000124525417110039 0.000381802414788054 0.000264762284462838 0.0014976347692418 0.000730421215455371 3.26342615872016e-05 0.00124508121451004 0.00347813006219898 0.00765844652106707 0.000796129247132859 7.90266755313473e-57 1.94989369896158e-05 0.000244865104439944 0.00795216785370291 0.00458555933564486 0.00537482253439946 3.69942359189672e-05 0.000180994817263901 0.00024495603399736 XM_002684277.2 BRCA2 PREDICTED: Bos taurus breast cancer 2, early onset (BRCA2), 0.0 1680 99.58 0.366301798279906 NM_000059.3 BRCA2 Homo sapiens breast cancer 2, early onset (BRCA2), mRNA. 0.0 942 82.26 0.361610633307271 TCONS_00036630_5 sp|P51587|BRCA2_HUMAN BRCA2_HUMAN Breast cancer type 2 susceptibility protein; 4e-109 350 74.69 0.983402489626556 0 noncoding AATTATGGCAGGACACATAAATGTAAAAAACCTGGTTCTGCAGCAGCAAGAAGCATAGTTATGGGGGTTGGGGGGACAGCGTACTTAGCAAAAAAATATATTTCAGAGGGTTGTATAACATGCCAACCGGTCTCATTAGTCCACTCTAGTGAGAATTCTCCCCAAAAGGGGAAATTTCAGAAGCAAACTGTTCTTAGAGGTTAAATGCAGACTTAATCACAGGATAGTTAAGTATCTTAAGTAAAAGACTTGAACAGAAACTTGCATGCTGCATGCTAAATCGCTTCAGTAGTGTTCCACTCTTTGCAACCCCATGGACCCCTCTGTCCACCTGGGCCTTGTTTACTAGACAACTTACTCAACTGGATGATTCAGTTTTCCCATCTGACAATACTAAAAAATTTATAAGATTATCATAAGGTTAAATGTGATATTATTTATAAATCAACTGGATGTTTCAGTTTCCCCATCTGACAATACTAAAAAATTTATAAGATTATCATAAGGTTAAATGTGATATTACTTATAAAGCATAAAGAATAACTCACAGATGCTCATTAAGAGGTAGCTGTTATTGGCTAAAGATCACAGGCCTGGGTATCTGTGCTATTTAGACCTAGATGATCACATGCTTTTGTATCTATGTGTATTGGAAAGGTGTCTACAGCCAAGGATTATGATCAAACTAAAATGACACCTCAGGTACCAAGTAAATGGCACCCTTTTTCGAATCCAAAGTTGCTTTCACTGTTCATTGGTCAGGAGCTTTTGTATAGTAGCAAGCCCTATGAGCCACTATCACCTTCAGAATCCAGTTGAAAGCTTTCTAGGTCCTACGATAAACACCTGAATTAAGCCTTGTGCTAGCCACAGCCCATACTCTGTGAGTGAGACTGCTGTCTTCCAGGGCAGTTTCAAGAGCAAGTCAGGCACAAAACAGGTGCTTGGTACCCTAGGAGCGTCAAGGATACGTCAAGGATACTACGGAAGCCTGCAGGAGGAAGTATTATCCAAAACTACAAGAGACTTGAGATAGGCTTAACAACTTTTCAAGCCGGGAGAGTCTGAGAGGTTTTTGAAATTCTGCTGCCCAACAGCAACACGCAGTCTATAACCAATGTACTCCGGCTTCAAATCTCAGCCCCTTCCACTCTATAGGGAGCTCTCCGTTGGGGAAGAAGTTATCCGTGCCGACTGACCACTGTGGGGTTTTCTAACGTCTGCCCACTTTGGGCGACGCCCTCTTAGTAGAGAACAAAGACTTTTCACAGACCGCAGGCCGCGTCGGGGCTGGGGGCGGCCATCCAAACGAGAGACGGAGCGGAGGAGGGGAAGGCAGGGCGTATACATGGGGCGTGGTCCCTCCAAACAGCGCGGCTTGGTACTCTGAAGGCTCGGAAGAAGAGAACGAGTATCCCGACTCTTTCTTTAGCGACTCCGGAATGACACAAGGTTTAGCCCTCGCCACAAGCGGCAGCACTTACGGCGCAGCCAGACTCTGATTCCGGTGGGCGTATACGCTGCGTGCTGCGTCATGGCGTCATCGCGTGACATATCCCGAGAGCAGGCTTTTGGCGCGAGAATCTGAAACCCGGTGGGCGGAGGTGCGGCTGCTGAAGTTTGCTGTCTCGGGCGGTGGGTCTCCGCGAAGGAGCGTGAGGGATCCGGTTTCTTATCTGAGTGCCGGCGCGTTTTGTCAGACTCCTCTGGCCAAAAAAAATAAACCAGCTTCACCTCTGAAGGCGACTCACCAAACTCTGAAGCAATAGTGTAGATAAAAATGCCGATTGGATGCAAAGAGAGGCCAACTTTTTTTGACATTTTTAAGGCGCGATGCAACAAAATTTAGGACCAATAAGCCTTAATTGGTTTGAAGAACTTTCTTCAGAAGCTCCACTCTGTAATTCTGAACCTTTAGAAGAATCAGAATATAAAATCAGCAGTAATGAAACAAACCCATTTAAAACACCACAAAGGAAACCTTATCATCAGTTGGCTTCAACTCCTGTAATATTCAAAGAGCAAAGTCTAACTCTGCCACTGTACCAATCTCCTTTAAAGGAATTACATAAATTCAGATTGGATTCAGGAAAGGATATTGCCAACAGTAAACATAAAAGTTGTTGCAGGGTGAAGGCTAAAATCAATCAAGCAAATGATGTTATCAGCCCACCTCCAAATTCCTCTCTTAGTGAAAGTCCTGTTGTTCTGCGATGTACACATGTAACACCACAAAGAGAAAAGTCAGTGGTATGTGGAAGTTTATTTCATACACCAAAGCTCATAAAGGGTCAGACACCGAAACGTATTTCTGAAAGTTTAGGAGCTGAGGTGGATCCTGATATGTCTTGGTCAAGTTCTTTGGCCACACCACCAACACTTAGTTCTACTGTGCTCATAGTCCAAGATGAGGAAGCATCTGCAGCTGTGTTTCCTAGGGATACTACTGCTATTTTGAAAACATATTTTTCTAACCATGATGAAAGTCTGAAAAATAATAAGTTTATCCCTTCTGGGCCAGACAGTGACAACAAAAATCAAACAAAAGCTGAAAGTCT EMBV3_00911 GGCTTAGGGGTGGGGAAGACGTGTGAGTCCCAACTGTATGGTTTTCTTGCTTCCAGTTGT Gene GeneID:508071|KCNE1L:NM_001077875:19_cdna Constitutive 0 NULL GeneID:508071 X GENE KCNE1L NULL KCNE1-like EMBV3_12270 TTGCGCTAATCCAAAGCACGGCGCTGCTCTCCCAGTAGACACCAGGGACTTACTTTCTAA Gene BVV0102_268845 + 0 NULL GK000019.2:20721607-20723150 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092628 TCONS_00092623 TCONS_00092626 TCONS_00092627 1 XLOC_056933 Coding TCONS_00092626 XLOC_056933 Coding Coding NEK8 19:20711305-20722605 j TSS69654 2900 2 TCONS_00092626_1 368 0.0548275862068966 14 0.744579166297902 0 0 1.23559491511915e-06 0 2.95302619744405e-06 0 1.06159934209883e-25 2.63579639334552e-06 0 3.12461347748254e-05 2.31068851017364e-24 1.6194711704976e-06 0 2.12168753306895e-06 5.35556903015427e-75 0.000710255654432534 6.85930342019709e-06 1.04211654148241e-05 0 0 0 0.00131911985629089 0.000613926793864535 0.000326601865159369 0 5.12898273232586e-49 8.17966278733027e-62 2.90021294455314e-05 1.55781394094453e-08 9.74344371483323e-05 NM_001192723.1 NEK8 Bos taurus NIMA (never in mitosis gene a)- related kinase 8 (NEK8), 0.0 2044 99.91 0.391379310344828 NM_178170.2 NEK8 Homo sapiens NIMA-related kinase 8 (NEK8), mRNA. 0.0 1395 88.19 0.376206896551724 TCONS_00092626_1 sp|Q91ZR4|NEK8_MOUSE NEK8_MOUSE Serine/threonine-protein kinase Nek8; 0.0 721 96.14 0.983695652173913 2 coding 0 0 0 0 -0.00750001705068237 0.946062605100063 0.0146659042612342 0.773157910951866 CCTTTGGGTTTGGGGGTTCCGGAATTGTGATTCTGAGAAATGAGATGGAGAAGTACGAGCGGATCCGAGTGGTGGGCAGAGGTGCCTTCGGGATTGTTCATCTGTGCTTGCGCAAAGCTGACCAGAAGCTGGTGATCATCAAGCAGATCCCTGTAGAGCAGATGACTAAGGAAGAGCGGCAGGCAGCCCAGAACGAGTGCCAGGTGCTCAAGCTGCTCAACCATCCCAACGTCATTGAGTACTACGAGAACTTCCTGGAGGACAAGGCTCTCATGATCGCCATGGAGTACGCACCAGGCGGCACCCTGGCCGAGTTCATCCAGAAACGCTGTAACTCCCTGCTGGAGGAGGAGACCATCCTGCACTTCTTCGTGCAGATCCTGCTGGCGCTGCATCACGTCCACAGCCACCTCATCCTGCACCGGGATCTCAAAACCCAAAACATCCTTCTCGATAAACACCGCATGGTCGTCAAGATCGGCGACTTTGGCATCTCCAAGATCCTTAGCAGCAAGAGCAAGGCCTACACGGTGGTGGGTACTCCCTGCTACATTTCCCCAGAACTGTGTGAGGGCAAGCCCTACAACCAGAAGAGTGACATCTGGGCCCTGGGCTGTGTCCTCTATGAGTTGGCCAGCCTCAAGAGGGCCTTCGAGGCTGCGAACCTGCCAGCGCTGGTACTAAAGATCATGAGCGGTACCTTCGCGCCCATCTCTGACCGATACAGCCCGGAGCTGCGCCAGCTGGTTCTGAGTCTGCTCAGCCTGGAACCCGCCCAGCGGCCGCCGCTCAGCCACATCATGGCGCAGCCCCTCTGCATCCGGGCGCTCCTCAACCTGCACACGGACCTGGGCAGTGTCCGCATGCGGAGGGCAGAGAAGCCCTTGGCCACTGGGCCACCCATGACCCCGGGCAGTACAGGAAGCAGGACCACCAGCGCCCGGTGCAGAGGCGTCCCCCGGGGACCTGCACGGCCGGCCATCCCGCCACCGCTGTCGTCGGTGTACACGTGGGGCGGCGGGCTCAGCGCGCCACTCCGGCTGCCCATGCTCAACACGGAGGTGGTCCAGGTGGCAGCCGGGCGCACGCAGAAGGCCGGCGTCACTCGCTCCGGGCGCCTCATCCTTTGGGAGACCGAGGCATCATCATGACCTTTGGCAGTGGTAGCAACGGGTGCCTAGGCCATGGCGGCCTCAATGACATCAGCCAGCCCACCATTGTGGAGGCCCTGCTGGGCTATGAGATGGTGCAGGTGGCTTGTGGGGCCTCTCATGTGCTGGCCTTGTCCACTGAGCGAGAACTATTTGCTTGGGGCCGCGGAGATGGTGGTCGGCTGGGACTAGGCACCAGGGAGTCCCACAGCTGCCCCCAGCAGGTACCCATGCCCCCAGGACAGGAAGCCCAGAGGGTTATATGTGGCATTGACTCCTCTGTGATCCTCACAGTGCCTGGCCAAGCCCTGGCCTGTGGGAGCAACAGGTTCAACAAGCTGGGCCTGGACCACCTCTCCCTAGGGGAGGAGCCTGCCCTACACCAGCAAGTGGAGGAGGCCCTGAACTTCACTCCATTAGGTTCTGCACCCCTGGACCAGGAGCCCCTGCTGAGTGTGGATTTGGGCACTGCTCATTCAGCTGCTGTAACTGCCTCTGGTGACTGCTACACTTTCGGCAGCAATCAGCATGGGCAGTTGGGTACCAATGCTCGCCGGGTCAGCCGGGCACCCTGTCAAGTCCAGGGCCTCCAGGGCATCAAGATAGCGATGGTGGCCTGTGGGGATGCCTTCACTGTTGCCATTGGGGCAGAAGGTGAAGTGTACTCCTGGGGCAAAGGGGCCCGAGGTCGCCTGGGAAGGAGAGATGAGGACGCCGCACTCCCTAGGCCAGTGCAGCTGGATGAGACCCAGCCCTACACAGTGACCTCTGTGTCCTGTTGCCATGGCAACACTCTCCTGGCTATCCGCCCTGTCACGGATGAGCCAGTCTTTCCAAGACACACCTGGATACACTGCTGGGTACCCTGATATTGCTTCTCCTGTGAATGGTCTTGAAAAGTGCAGGCGCCACACTGGATTTTATCATCAGTGGGGTATAAGGACCAGTAAAACCCTGCTCTGCTTTTGGCTCTGGATATGGGCTTCCCTGGTGGCTCGGTTCGATCCCTGGGTCGGGGAGGTCTCCTGGAGTAGGAACTGGCAACCCACTCCAGTATTCTTGCCAGGAAAATCCCCTGGACAGAGGAGCTTAGCGAGCTCCTACAGGGCTACAGTCCATGGGGTCACAAAGAATTGGGACACGACTTAGCGACTAGACAACAACAAATGTAAAACTCAACCCACCCAACTCCCCCAGCATCCTAGTTTCCCCTCCCCACCCCTTCTTATCTTTAGTTAATGTCCCCAGGGTTCAGTCTGGCTAGAGCTGGAGGCCAGAGTGACTTTAGGAAGCAGGGTGGTCTCCGGAGCCTCTGCAGAAAAAGGCTGGAGGTGGCTGTGTGGCGCCACCCAGACCCTGCCCATTCCCCCAGTTAGAAAGTAAGTCCCTGGTGTCTACTGGGAGAGCAGCGCCGTGCTTTGGACTAGCGCAAGCTGGGGCCTGCCTGGACTGGCCATTCCAGCGACCTAGCCCCTGCATCGCCCGGGGCAGGGAGGTCCCAGGAGCGCTGCCTCCCGCCCCCACTCCTATATCCAGAGGCAGGGGGTTACATAATTTTTGAGTGCCTCCCTTCCCCTGCGGGAGTGCATGGGCTGCAGTACACTCCATGCCAGTCCCCCAAAGCAGGTTGGGAGAAGGGGTAGCTGGCTGGACCAGACTAGTTTCCCAGATGACTGGGAGGTAGCGCCAATAAAAAAAAAAAAAAAAAAAACAGCTGCCTGCCTAGAGTGTGGTCTCTTCAGGGGTGGG EMBV3_07199 AATGAGAAAACATACTTGGGAGTAAATTGCCCAGTTGGCACAGTTTGGGAGGATGGAGGG Gene BVV0102_244117 + 0 NULL GK000006.2:60206837-60210359 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203280 TCONS_00205216 TCONS_00203282 TCONS_00203281 2 XLOC_124143 XLOC_124611 Coding TCONS_00205216 XLOC_124611 Coding Coding RPL9 6:60208788-60215126 = TSS153303 2272 1 TCONS_00205216_1 192 0.0752640845070423 8 0.642733154489506 4.55126242825943e-05 5.42671088954186e-05 9.90633539050077e-05 6.19746341904227e-05 0.000214438844428678 0.000400560964621594 0.00011611469378304 0.000190147245056465 0.000264596779017985 0.000199698995626313 7.32863550983683e-05 0.000106772334538904 0.000156237663748055 0.000310205518318411 1.35115209941886e-05 0.00399399829435694 0.00182438467493378 0.00396741931441756 2.17348872941827e-05 2.92231844559868e-05 2.10103951777265e-05 0.00115130623214665 0.000877372894301619 0.00300657309600636 2.59228418934729e-05 4.84744013993032e-06 6.12615397982311e-05 0.000270153763439496 0.00015368045538729 0.000379329950902463 XM_005199290.1 LOC101905894 PREDICTED: Bos taurus 60S ribosomal protein L9-like (LOC101905894), 0.0 2401 99.63 0.591109154929577 NM_000661.4 RPL9 Homo sapiens ribosomal protein L9 (RPL9), transcript variant 1, 0.0 915 89.19 0.307218309859155 TCONS_00205216_1 sp|Q3SYR7|RL9_BOVIN RL9_BOVIN 60S ribosomal protein L9; 5e-140 393 100.00 0.994791666666667 1 coding 0 0 0 0 0.0649047258453032 0.729687610186066 -0.0111089755676717 0.865292231749236 CTCTTTCTTTGCCGCATCTACTGCGAGAATGAAGACCATTCTCAGCAACCAGACTGTCGACATCCCAGAAAATGTCGACATTAACTTGAAGGGACGGACAGTTATTGTGAAGGGCCCCAGAGGCACCCTGCGGAGGGACTTCAATCACATCAATGTAGAACTTAGTCTCCTTGGGAAGAAAAAGAAGAGGCTCCGTGTTGACAAATGGTGGGGAAACAGAAAGGAACTGGCCACTGTTCGCACAATCTGTAGTCACGTACAGAACATGATCAAGGGTGTTACACTGGGTTTCCGTTACAAGATGAGGTCGGTGTATGCCCACTTCCCCATCAACGTTGTTATTCAGGAGAATGGTTCTCTTGTGGAAATCCGAAATTTTTTGGGTGAAAAATACATACGCAGGGTTCGAATGAGGCCAGGGGTTGCCTGTTCAGTATCTCAAGCCCAGAAAGATGAGTTGATTCTTGAAGGAAATGACATTGAACTTGTGTCAAATTCAGCTGCTTTGATTCAGCAAGCCACCACAGTTAAAAACAAGGATATCAGAAAATTTTTGGATGGTATCTATGTTTCTGAAAAAGGAACAGTTCAGCAGGCTGATGAATAAGATCTCAGTGATCCTGCTGCAGAAACAACAAGATAGATGGTTCTATGGACTCAGTTGTGATGTTTTAAAGAGACAATAAAAACTCTTGATTTGAGATTTTTTCCTACTGATTATCATTTCAAACTATTTGGCCAGTAAGCAGTTAAGTAAATTCTAGTGTGTTAAAAACAATAACAGAAGGAATAGGAGTGGTTGGTTGATTTTGTTGTTGTTAGAAAGATGTTGTTAACAAGACTTAATGGCAGAGGGGGCTTGAAGGAATACCAAGGACATTTCAGGCAAGAGGAATATGGTTATCGTGGGAAGAACTTTCGGAGATGCCCTGAAGGTATCTAATTTTGCAGTGGCACAGATTTGAATATTTGTGAAGCAAATGCCTGAGTCACAGTAACTGAAAAAGCAGCTGAGAAGTGATACTGTCTTAGTAAGAATTAAAAGATGGAGTTAATTTGTATTTATGATAAACATGGTTGCTGTAGTCTTAAGGTTCTCTCAGTTATACTCAGATTTCAGCCACATGTATATCCTAGTCTTTGATAGCTTTAAAAAAACTTAAGAAACGTTCCATGTGTCATACTTCAGATATACTACTATATAGTACAGTAGGGTTACCCCTAAACCTGCAGTCCTCCCCTATCTCATTTGTTAGAAACTTCTAACCGTGTGATTTCTCAGGCAAAACATTTAACTTTGTCTTACATACTGTGTCTAGTCCATCAATAAAATCTGTGGGCTTACTAAGATCTTGGTTTAAATAAATGGAATTAATTTTATATTGAGTTAATCATTGGTTTGATAACGGTTAAATTTTTGAGACATGGGTGAAATTGTAAATACAGATTTTGCTTTGAATTGTTTTGAGATGAGGTTTAGGGTAGGCGTTGGATGATTAAGTTGTCTTTTCCTTTGAGTGACTTTTCAGTGAAGCCTGTTGTGCTCATTCCTCATGTCCATCCTAGCACACTCTGCTCCAGTTTTTGTCCATAATGTTTATAATGTAAGATTAATAGTTTACTTTGTTGGGTATTGATTATATACTTTTTTCCTGCTAAGAGTCTAATCTTCATGGGGGGGTGGTGTGACCTTGTCTACCCTGGGATATTCCAAGTTCTTAGAACAGTGTCTGTCATATAGCTATTTGCTGAGTGATTGGTTCCCACATTGCCAGGGAGATTGAGGTTGTGGAGATTGAGTAATAGTAATGGGCCTCGAAATATGTTTTTAAGGTATTGACAGAATTTTAAAATTGAATTTGAGGGTTAAAACCTCCAAGTGGCAATGTTGCAGAGGGATAAAGGTGTTAGTGTTAAAGAGTGTCAGTATATAGGCAGTGGTAGCAGCAATGGGAGTGTGTAACACCAGAAGTGAAGTGTGGAGACTTTAAAGGCTAACTCTTGGCAGTCTGGTTGTAGCTGAGGAGTTACTTCAATTTAATAACTTAGATGTGGTAAAGGAAAGTGTAGTTCTCCCCAGGGAAGCTTTCCGTGTTTTCTGTTTACCATGGATGAGCATGTAAGTGCATCCTCAGTTTTGAGGTGTAGCAGTCTACATTTTCTAATGAGAAAACATACTTGGGAGTAAATTGCCCAGTTGGCACAGTTTGGGAGGATGGAGGGAGGGGGTGTTGGCAGAACCCAGTTAAAACACCAAACATTCACATTCCAC EMBV3_41879 ACTGAGACACACAGGCCTCTACTGCAACCAGCTCTCATCCACTGACCTTCTCAAAACAGA Gene GeneID:525346|NCOA1:XM_002691465:323_cdna UTR3_Alt 3 NULL GeneID:525346 11 GENE NCOA1 NULL nuclear receptor coactivator 1 EMBV3_43650 AAAGGGGACGTCCTGCACATGCACTATACGGATGTGTGAGGGGGAAAAGCGGAAGCTGGT Variant GeneID:538998|FKBP2:NM_001113256:69_cdna 284^396 1 EMBV3_26585 GeneID:538998 29 GENE FKBP2 MGC133593 FK506 binding protein 2, 13kDa EMBV3_21440 CAGGTGGTATGTAAGAAGTACCGGGGATTCTCCAGATGATGAGGAAATCGAGCTGGCCTA Variant GeneID:515646|CLIC1:NM_001015608:132_cdna 765^841 2 EMBV3_27385 GeneID:515646 23 GENE CLIC1 NULL chloride intracellular channel 1 EMBV3_40925 CACTTAGGTGTCGGAAGGTTGGACGGGACCGACCCCTTACACTATGGAGTTGACAAAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22793 CTGCTCAGACGCATAACGGGCCAGCATGTTTCTCTGATTCCCCGTCTAAAACTAACTGCT Gene BVT0102_030126 - 1 EMBV3_34174 GK000009.2:95502673-95719051 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242779 1 XLOC_149442 NonCoding TCONS_00242779 XLOC_149442 NonCoding NonCoding - 9:95523958-95527927 - TSS182457 3969 2 TCONS_00242779_5 123 0.0511463844797178 1 0 0.000826146970230399 0.00135447482570902 0.00100723851416806 0.000353590006423839 0.00156985212893326 0.000250546987362057 0.00096533933653037 0.000706368216360697 0.000359817283272138 2.38431233760255e-05 0.000119390497132146 2.52253083576939e-05 8.8196706700866e-05 0.000884147147151395 0.000170585929214712 1.33089565606819e-05 0 0 0.000527566829180381 0.000732006856767031 0.000177447515138167 0 4.62285335920513e-06 0 0.000541150211722074 0.0015798602079969 0.000966929840007302 2.17804344132957e-05 3.66939495771598e-06 1.51479699982224e-06 XM_005217899.1 BRI3BP PREDICTED: Bos taurus BRI3 binding protein (BRI3BP), transcript 2e-48 199 92.70 0.0337616528092719 0 noncoding 0 0 0 0 -0.0597706310601378 0.592245577108567 -0.0130603383369523 0.819482730512174 GGTTCTTGGCTCTATGTTATTGAAGATGGCATATACTTTTGAAGAGAAGTGAGAAAGCAGAGTAAGGGAACAGAAGGTGTCTGCTGGAGTCCCCAGGGGTGAATGGGGTCTCCAGAACCGTGGGGGCCACAGAGGATCTGACGGTTCTTGGGTCCTGGGAACTCTTGTAAGTGGTCCAGAAAGTTGGATGCCCTTGGTGGTGCTGGCTAAGTCAGCGCTATAATGATCCCTGGTCATTGTGTTGTGAGGCTGCGGTCATGGCCCTCCATGAGCCCCTCCCTGCACCCGCATCTGACCTTGGACTGGACAGATTACCAGCCTCTGACTTACGTTTTACTGATATTTCTAAACTGCCTACCTACCACCTGTGCTACTAATTTCCTAATGCTCTTAGTATTTTCCTATAAATGGACTCACTGGAAAGGACTTAAGTTTGTCCAAGAATCACTTAAACCATCTGCTTTATGAGTCACACTTTGGGAAACACTGGCTTACTCAGCCTCAACCTGAAATACACCACCTTTGCTGAAACTCCTTTGTCTCTAAGCAATATCTCTGATGTAGGATTCTTTTGTGTGTGTGTATGTTGCATATGCTCTCATATGCTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCCATCTCTGCGACCCCATAAATGGCAGCCCACCAAGCTCCTCCATCCATGGGATTCTCCAGGCAAGAGTACTGGAGTCGCTTGCCATTTCCTTCTCCAATGATCTCCTATGGAACTTGCCTAACACAATTATGGATTTTATTTTTTTTAAGATTCAGGGTCTTATGCTCATTTTAAAATACAGTACCCCCATGCTCTAAACGCTATAATTTCAGTCTTTGCTTTTCATAGAGCTTATGATTTCTTAATTTTATGTACTGTCAAGGAAATAGATTTTATAACCTAAGTTAGAAAGATGTTTAACAAATCTCGTGAAAAATTGCTAAAACATAGGAAGTGTTCTTTTGAATACAGAAATTGCAGTTGATCCTTAGAGGAGGGTAAGAAACTCAGTATCCTTGTTCTTGCCCCTGCCCTGTTACCTGTTATAATTAGCTTTTTTATGGGATAGAAATCTTCCGTTCTTTGGAGTTTCTCTTATAAGCTGGCTTTATTTAGGATAACAGCAGATGTTGTTGATCTTGGTTATCTCCAGCTTCTGAGGGGCATTTTCTTGAGGCAAGAATTCCAAAGGGATCTGTGCTTCTCATCTGTGTTCTTGAGATTCAGACAGACACTGTCTGAGTGTTGATCCTTTATTTCTAAGCTTTATGAAATCAGAATCACAGTGTATCCATACATAGAAACCCTGACGATTCTGGATTTACTATTCTCAGATCCCTCAGAATAAAGCTGTAAATTCTTACTACCTGTTAACTTTATTTTCTCTTGACACTCTGTGGTGACTCTTGAACCATTGAAGGGCTTTGATTCTAAGGCACATTTTTACACAAAATTGAGAGTTTGATGTTTTATTATTTTGTTCTGTACTGAAAGGGATATTCTAACAATTGGCCCCCTGAGCTTAGATTTTGGATCGACTAACTATCCTTGGTTTCAGCTTCATTCTTTCAGTAGGTATTTATCGAGCACCTACTGTGTCCCAGACATAGTGTTAGATTGTAGAGGTGCAGCGTCTTTCCTTCAAAGACCAGATGGGAGACTGGCCAGCCCACCTGAACTTCTACTAGATTTCATTCAAAGGCCTCTGTGTTTTTTCGTTTGTTTGCTTTATTTTGGTTTCGAACAGTTGTTGATCCACATATTTGCCATTTACTTCTGGTGGCCAATGTGTTCTTTTCAATTCTGGCTCAGGAAATAACCTTCCTTATTAGTTGACGGTTGTTGTTCCAAACTTTATGCTTATCTCAAGGGTTTTAAGTATGGGATGTATAACTTAGGTTGAGAGTTGTGAACAGTAGGAAAAATGTCATTTGCTTTGCAAAGTCCTCAAGGCCACAGATTCCTTGTTGCTAGCTGTATCTGGCTTTCATTTCCAAGATTCCCTCCTAGTGCAAGATAGTTACTTCACCTCCAGTCAATACGTCTGCATTTTAGCCACCCAAAAGGTGAAGAGTCAAAGAAATAAGGTTAAAATGTATGCATAAGCCATATTCCCTGCCACATTCTCAATCTTTGCTACTTGTGAATGTACTTTTCTTCTAATATCAAAGTCATCTCTCTAAATCCTGTAACAGGTCACACTCTTTAACACCAGAAGATCCTTGGATATGAGATATGTTTATCCAAAGAAGAAAGAAAAATGCAACATAATATTATTAATTTTTAAATGTTTCTAATGTATCTTTAAACAGGAGCTAACAAAACTGAAAGTAAATACTAGAAATGACTGCTCCCATTTTTCTTCCAGCATATTAAAATGTCTCCAAAAGTTTTGATAGTTTTCTCCATATTATTCAAAGAGTTATTTGATGGCAACTGCAGGCCAAGCTTGTGTTTTCTTTTGCTAATGCTGTATTTGATACTGACATCAGGTTTAAATGCTCTCTAAACCACAGCATAAGCACAGTATTGATTTCAGTCGGATCAGAAAGCATCCTTTCGTGAGTGTCTTTGACAGCCCTGGAAACAAGGCCGTCGGGCTGAAAACAACCCTCAGTTTCGGTGTCACCCATCTCAACAGTCTCATTTATCGCAAATTGAAGAGCTTTGCCCAGGCCGTCTTTCTTACTACACCTCTGTTGCCTAATGTTTCCTGGGAGACGATGCCAGGCCACTCTGAAAGGCAGCGGAAAGCTTTTAGAAGCGAAGTGAGCTGGGTATTCACCACAGTACCACTTTCTTCCGAAGTTCTCGAAGGCTTTCACAGTCTGAGCTGGCAGGTTGCAGGAGGGCTGCAGGAGTTCTGATGCCCCTTGATGCAGACGCTGTGGATCTATTTGAAGATGCACCATCTACGCGGGCAGCGGAGGCGTGCCGGAGACATTGTAGACAGGGCAGGGTGACCCGTGCCTATGTCTAAGGGGAGGATCACTCAGGAACAAAAAGGAACGAAGGCAAGGAAGCAGGCATCTGGGCCTTGGGGGGTTGTGGGGGCAAGAGAGGTTCATGTTGAGCTGTCGTCCCTTTTTATCACCGCCCTGCACCCCTAAATGAAGCAGAAGAATCACATGGAATCCCTACGAAGCTTCTTGTAGAGACTGGTTTTCCTCAAAGGCTGCTTCTCAATCCAGAGGCCCCCGTGATTCTGGCTTTTGTTTGTTTTGGGTTTGTTTTTTCAGCAGGTAGGATGGTGGCGTCCTGGGCAGGGGACCCTGCCCCTGGCTGCCCCGCTGGCCGGCTGTGCTCATCTTCAGGACTTGGGCCACCACGTACCGACCATTGTGATTTTCTTCGTGAGGAACAGAATGTAATCTTTCTTATAGTCAGCTGGGGATACAAGCGGCTCTTGTTAGAAGGAAAATGACTGTGGAACACAGCCTTTTCGCTCAGATAAAGCAGTTAGTTTTAGACGGGGAATCAGAGAAACATGCTGGCCCGTTATGCGTCTGAGCAGAGCTCTCCCCGGCGCTTAGCTCAGTGTCAGATGACATTCTTTGATAGCTACTGGGTACCAGTCCCCATCCCCTTAATCTGACTCTGCGAGGAGGGTGGGTGAGGGCTGAGAAGAGAATTAACTGCAGGCCTGAGAGAAGAAACAGAGGAAATGGGAGTTTTGCTGTCTTGGCGATGCCTGGGTTTCACGAGGGCTCATTGATGTTTGCAGATTGCTGCCGCTGTTGTGAAATCACATTCTCTTCTGCTTCAGGAGGGGGCCTGCTGCTGCTGGCGGGCAGCTTTTCCTGCTTTCTGCGTCCCGAGGAAGCCTCGCAGGCCTGTAGCCCTAGATTCTGAATGGAGGTGCCAGGTTAGGGCTTGAGCAAAGACCGGTCCAGTCATGTGCTGATGCTGGTAGACTTTTGAGTTTGCAATCTATCTCAAGGGCCTAAAAGT TCONS_00238109 . 5' 128064 TCONS_00238109 . 5' 128064 EMBV3_06478 CCCTGTAGGTGTCTCTTTGCTTCCACTTTATGATGTTACCACTGATATCCCCATTTCCCC Gene GeneID:526910|HTATSF1:XM_002699606:156_cdna UTR3_Alt 2 NULL GeneID:526910 X GENE HTATSF1 NULL HIV-1 Tat specific factor 1 EMBV3_05306 ATAAGCCTCCACCAACCAGAAGAGTTCGGGAAAGGTCAAAAAGGAGACACCACCTGTCTG Gene BVT0101_059445 + 0 NULL GK000010.2:36758367-36793943 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38788 AAGTGAGTGGGGAGGTCCAAGCAAGCCTGAACTGTCCTGTGATTGAAGTCTTGATGACCT Gene BVV0101_073418 - 1 EMBV3_42786 GK000002.2:107574110-107620511 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111427 1 XLOC_067327 Coding TCONS_00111427 XLOC_067327 Coding Coding - 2:107576261-107577297 - TSS83048 1036 1 TCONS_00111427_2 82 0.204633204633205 1 0 0.000380854641776796 3.87970047354569e-05 1.78648656072396e-05 0 0 0 0 0 0 7.94306961090615e-06 2.20963744693076e-06 0 3.04653727560279e-05 0 0 0.000280431803403891 0.000448710110336819 4.84378741581444e-05 6.92174179282227e-06 0.000527557313485022 0 0.003022714097583 0.00061986718136019 0.00149684152675547 0 0 0 0.000537741304122782 4.21732279470101e-05 0.000649972821046156 XM_005202859.1 WNT10A PREDICTED: Bos taurus wingless-type MMTV integration site family, member 10A (WNT10A), transcript variant X1, mRNA. 0.0 1757 100.00 0.939189189189189 NM_025216.2 WNT10A Homo sapiens wingless-type MMTV integration site family, member 10A (WNT10A), mRNA. 0.0 749 76.27 0.939189189189189 0 coding 0 0 0 0 -0.00605733728584001 0.952930647803181 -0.010804207135029 0.838242692207821 CATCCGCCCGCACAACCGCAACAGCGGACAGCTGGAGCCCGGTCCCGCGGGGGCACCCTCGCCCGCCCCGGGCCTTCCGGGGCCACGGCGCCGCGCCAGCCCCGCCGACCTGGTCTACTTCGAGAAGTCGCCCGACTTCTGCGAGCGGGAGCCGCGCCTGGACTCGGCGGGCACCGTGGGCCGCCTGTGCAACAAGAGCAGTGCGGGCCCTGATGGCTGCGGCAGCATGTGCTGTGGCCGCGGCCACAACATCCTTCGGCAGACACGCAGTGAACGCTGTCACTGCCGCTTCCACTGGTGCTGCTTCGTGGTCTGTGAGGAGTGCCGCATCACTGAGTGGGTCAGTGTCTGCAAGTGAGCCGACGGCTCTCCTCCCTCAGGCTGCTCCTCTGTGGCGTGCGATCTTGGCCGAACATCACCTTGGTTCCTGGGAGTGGAGGCTGGACCACGAGATTTTATAGGAACCTCCCAGCCCTGAGGTCATCAAGACTTCAATCACAGGACAGTTCAGGCTTGCTTGGACCTCCCCACTCACTTCTGTGGTCTCCAGGACAGATTTTGCCTCCCGGATATCTGCCCCAAGCTCAGACAGCTCCGTTGGGCTGGGGGTTGCCCCACACTTTAGGGCAGCGTCAGCCAGGCATGCTCTGGGCTTGCTCCTTTATCTCTTCACCTCTTCCCCTGGAGTGGGAGGAAACTAATGGAACTGGTGGGTAGGGGGAGGAGGAATACAAAGAAGAAATGGCCATCACTGAGCTGAAGTGTTTCTGCAGAGGCCTCAGAGGTTCTCCTCCACCGGCCCCTGCCCCTCCTCGTTCATTTAACAAATATTTATTTTGCACTCTTTGTGGCCTGGCACTCTGAGGGGATGAGAGGTGCTGGGAATACAGATGTGAATAAGAGACACAGCACCTACCCTCTTGGAGTTTACATTCTGGCTGGGGAAGATGGGCAATAAATAAGAAAATGCACAAGCAAGGACATTTCAGGCAATGCTGTGTGATGTGAAGAAAATAAAGCAAGGTGCTGGATGTAG TCONS_00103320 . 3' 2153 TCONS_00103320 . 3' 3188 EMBV3_18489 GCATTTGAGCAGTCCAACTTCCGGGGGGAGATGTTCGTCCTGGAGAAAGGCGAGTACCCA Gene GeneID:282205|CRYBB1:NM_174526:14_cdna Constitutive 0 NULL GeneID:282205 17 GENE CRYBB1 NULL crystallin, beta B1 EMBV3_23014 CAGCGGTAGAGCTGGTCTTCTGGTCTCCTTGGAGAAAGACTCTGTTGCCCTGATTATGAA Gene GeneID:538690|ID3:NM_001014950:239_cdna Constitutive 4 NULL GeneID:538690 2 GENE ID3 NULL inhibitor of DNA binding 3, dominant negative helix-loop-helix protein EMBV3_07632 TCAGAGATGAGTGAAAAGCAGGACGAGTACGAGGAGCTGGACATCATCCACAAAGAGGAG Gene GeneID:513272|IQCD:NM_001075606:144_cdna Constitutive 0 NULL GeneID:513272 17 GENE IQCD MGC140620 IQ motif containing D EMBV3_24734 GAAACCATCATCAACATCTTCCACCAGTACTCTGTACGGCTAGGGCACTATGACACCCTG Gene GeneID:532569|S100A9:NM_001046328:171_cdna Constitutive 0 NULL GeneID:532569 3 GENE S100A9 MGC137042 S100 calcium binding protein A9 EMBV3_04395 GACGTGATGATAATGAAGATGCAATCAGAGAGACTTTCAAAAGAGTACGACCGGCTCCTG Gene GeneID:511018|BCAP29:NM_001038075:45_cdna Constitutive 2 NULL GeneID:511018 4 GENE BCAP29 MGC133766 B-cell receptor-associated protein 29 EMBV3_28362 GATGACCTTTCTGTCTACTTGTATTAATTACTAAGAGAGGACTGTTGAAACTCTCCAACC Gene BVT0102_051461 + 0 NULL GK000011.2:75261308-75290643 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38367 CAAGAGTGTTGTCCCCATTCCCAGCCCACTGTTTATTCACTGACATCAGAATCCTCCAGG Gene GeneID:497205|LEPR:NM_001012285:22_cdna Constitutive 0 NULL GeneID:497205 3 GENE LEPR Ob-R Ob-RM leptin receptor EMBV3_06729 ATGTTGCCTTGCAGGACCATTTCAAGTGGGTGATGCCTGGGATTCAAATTTGCAACCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24057 CCTGCCCAGGCACTAGCCTGTGTGGCCCAGGGGGCCCTCAGGTGGCCGCCTCCCTCTTCC Variant GeneID:509263|LOC509263:NM_001031755:85_cdna 398^550 3 EMBV3_05608 GeneID:509263 16 GENE LOC509263 FLJ20584 hypothetical protein LOC509263 EMBV3_05274 CTGATCCTGTCCTCAGGAAGAAAGAGGATAAGGGACAACTCAGTTCCAGAGACCAAAAGG Gene BVV0101_067304 + 0 NULL GK000015.2:79268080-79276427 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060218 1 XLOC_036605 Coding TCONS_00060218 XLOC_036605 Coding Coding - 15:79267155-79270063 - TSS45035 454 1 TCONS_00060218_1 122 2 0.844513243894049 0.000119874082189457 0 2.03832868334661e-05 2.33442725623268e-05 0 3.93949054004865e-05 6.42258267116952e-05 1.0914796008097e-89 0 1.81255110352962e-05 0 0 6.32001800938481e-06 0 0 0.000116350393157277 2.90971463372779e-208 0 1.57949937875144e-05 0 2.93378224938587e-170 0 2.02071639106476e-05 7.38529978495834e-05 1.52609567271419e-05 0 1.44576487760479e-05 0 6.08387164846185e-05 0.000264856848991732 XM_005194721.1 OR4S1 PREDICTED: Bos taurus olfactory receptor, family 4, subfamily S, member 1 (OR4S1), transcript variant X4, mRNA. 2e-49 199 100.00 0.240088105726872 NM_001005513.1 OR4C45 Homo sapiens olfactory receptor, family 4, subfamily C, member 45 (OR4C45), mRNA. 2e-25 120 84.91 0.231277533039648 TCONS_00060218_1 sp|A6NMZ5|O4C45_HUMAN O4C45_HUMAN Olfactory receptor 4C45; 1e-08 53.1 74.29 0.278688524590164 0 coding 0 0 0 0 -0.0553101896406659 0.67169059994519 0.018925709101447 0.730696096979643 GAGGATGAGCAATGTAACAGAATTCATCCTACTGGGCCTGACCCAGAATCCAGGACTGCAGACACTCTTATTTGCTGTGTTTCTGATCATCTACTTGATCACATTGGCAGTGACAAGTGGGAGAGCTGGTGGAATCAGCTGTGAGATACTTGAGCAGCACTTATTTCAGAAGCTCTCACTGATGGTGGATCCTGTCCTGATCCTGTCCTCAGGAAGAAAGAGAAGAAGGGACAGCTCAGTTCCAGGATCCTGTCCTGATCCTGTCCTCAGGAAGAAAGAGGATAAGGGACAACTCAGTTCCAGAGACCAAAAGGCCCATCTCTGTACAGAGCTTGCGATTTCTGAGGGAGAGCTCAGAAACTTGTTTTCATGAGATTTCTCAACCAAGGATTTGAATATCAGGCGATGCTGGCTTTTCATTTCTCATGTTCTTCGGACTTTATTATCAGGTTAG TCONS_00060217 s 3' 5709 TCONS_00060217 s 3' 5709 EMBV3_18447 CACGAGAAGCGAGTGAAGCTGCAGATTTGGGGTTTGACTTCTTTGAAGCCAGTGCCAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40006 TTCCACAGACCGGGCCTTTTGCATATCTAGCCAGCTGCCATTCATCCCCACATACATGCA Gene BVT0102_170910 + 0 NULL GK000022.2:12724265-12729702 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126113 TCONS_00126119 TCONS_00126112 TCONS_00126116 TCONS_00126122 TCONS_00126111 TCONS_00126117 TCONS_00126118 TCONS_00126114 1 XLOC_077372 Coding TCONS_00126122 XLOC_077372 Coding Coding LOC515736 22:12707701-12726264 j TSS94690 2886 1 TCONS_00126122_2 221 0.135481635481635 7 0.844898179075531 0.00260995158180469 0.00307838672096442 0.00626055953132462 0.00265148417361022 0.00351901355915624 0.00125753024604555 0.00343561102138693 0.00320353493653764 0.00579893200396502 0.000288637435929181 0.000565527906725701 0.000412818436179501 0.000248031097564087 0.00260739419222943 0.000519600755052572 0.00048175111180562 0 1.18266137194955e-196 0.00693282031140231 0.00727579711654164 0.00155517376136062 0.000328042943047378 0.000107909882411025 0.000261985077372172 0.00812446558587493 0.00598985714767974 0.00253015122576169 0.000138629401040367 2.84209570009465e-05 2.10075631490124e-26 XM_005222461.1 LOC515736 PREDICTED: Bos taurus uncharacterized LOC515736 (LOC515736), 0.0 4378 99.96 0.841649341649342 TCONS_00126122_2 sp|P31944|CASPE_HUMAN CASPE_HUMAN Caspase-14; 3e-45 154 36.32 0.995475113122172 1 coding 0 0 0 0 -0.18120202466907 0.278955790850722 0.00993686155429763 0.884585039270858 GGGAAGAAGAGAGAGAGTTCCCAGGCACGGAATCCAAGTGACCAGTCCAAAGCAGCCATCAGGGTTTACCATTCTGGGACGGGCTGAGAAATCCAGATTGACTCAGCAAGACTGAGTGATTCCACGAAAGAGTCTAAAGAGAAGCTATGACTGTGTGGACGGTGAATTGTACCGTTACGACCTAAGTGGCAGGCGGAAGGCCTTCCTCATGTGTGTGAAGAAGAACAGGCTAGGAGCTCACCAGGATGTCCAACTGATGAAGGATTGGCTTAAGGAGTGCAAGTTCGAACCGACGTTGTGCATCGATCCTGACAAAATGGACTTACTTGGAAAAATAACATCATTTCGTGATGAACTAAATGAAATTAAAGATGACATTGGCTGTTGCCTTGTTACTCTTATGTCCCATGGAGAAGAAGGTTTTATCAAAATGAAAGACGGTGAAAAAGTCAGCCTGGAAGACATTTTTGAAATGTTTAACAATAAAAATTGTCCAGCACTTCAAGAGAAACCAAAAATCTTTATAATCCAGGCCTGCAGAGGAGAGAGAAGAGACAGTGGTGTTGAAACAGATGATGAACCCATGGACTTGGATGATGGATCAGAGAAGAAGAGGCTGCCTACATTCAGTGATTATTTCATTGTATATCCCACCCAAGCAGACCATGTCGCTTTACGGGATCCCCGCACTGGCTCTGTGATGATCAAGGAGATGACTGAAGTCTTTAAGCAGTATGGGAATAAGTGGCACCTCGCTGACTTCTTTACCATAGTGAATAACAGAGTGGTGCACCGCGACTTTAATCTGTGTAACAAACCAGTGAAAGTATCGCTGGTAATGGAGTCGACTTTAACAAAATTTGTATACTTTTGACACAAGGATGATTCAAAAAACAAAGACTGCTTTGCAACACAGTTTGTGAAGAGCTATGAGCATTTGTAGCATTGCACTAATGGTTACCATTTTGCATTATTCTTGTCACTGATGTTTCTTCAGTTTTGTATATATATATAATTTTTCTAAGATTTAAGTCTGCTTACTTGATACTTGTCTTTTTTTTCTTTTTTTTAAGATCACTGTTTTCTGAAAAAACACTTTCCTGAATTGTTATCAAAACATGGACGTCCAGCTCCATTTGTGTACTGGTTTTATCCCGCGTTTTTCTTGCTGATTACCCTGCCCTCTGCACCCCTCATTTGGTGCTGGCTTTAAGGCTTATTTTCTTGGTTTAGTCGAGGATTGCTGGGTGTGGTCTTGTCCTCTGTTGTGCCTTATCTCCCCAGACTTGTCTGTAGCCAGTCTGATCTCTTGGATCCGTAAGCCATTCTCGGGTCTTAACCTGGATCACTCTGGGCCTTGATGCCTTTGTGTGTTTGCTTTGCACCTGCTTCCCACCTTCCTCCTTGCACCTCTGAGCTGCTGTCTTCTCCACTTGGAACCCTCTATTCCACCCCACACAGGTAAGTCCTTGCCATCCTTTAGAATTTGGTTCAAGCATCACTTACACAGGGAGGCTTTCCATAGCCTCCCTGCTAGGTCAGCCTCTTCTAAGTGCTCAGAGACTCTCTGCTCCTCTTCTGTAGCATTGAAATGACTCTATAGTGCCTGTTTTCTCTCCCTCTGCAGTTTAGTCATGAGCTCCAAGAGGCAGAGGTTGTGTGTCTCACTCATGGCTGTGTCCTAGCTTCCGTCCGCACCTTAGGACACAGAGAGGCCATGCAGTGAACGTTGTAGTGAGTGACTGATCCCTGTGTTTTAATTATTTTACCCATTCCACAGACCGGGCCTTTTGCATATCTAGCCAGCTGCCATTCATCCCCACATACATGCATGTCTCATGGCTGCTTCTACTCAACAAGTTGGGAGTTAACCTGAGTTTCCCCGAAATCCTCTCATAAAAGCCATCCCATTGTTCATAATCCTTTGACTCCCCACTGCCTGCAGGATATACCCCCCAAGTTCCCTAGGAGAATATTGCAAGTCTTTCTCCATCAGGCTCAATCTACACTACTCATGTCCTGCCTGTTTGTCCTGGTAATTCACCCTCCCTTAATAATCCTGTCTCACAGAACTGGGCTTGTGGCTTAGTGGATGGATGAACTCTCCTGGATATGTCATTGTATCGGAGTTCAGTCTCCCCTTTCGGTCTGCAATGCCCTTCCGTTCTGTGTGCTTCCCTTCTACTGTGTATTCTTCAGGGAGCAACTTGGGTCCCATCCCACAATAAAGAAAACTGTATACAGACTAATGATTTTAGAGTAACAAGCTGTGGACTGAGCATGAATTTTTGTATTCAAACTTTTGTTGTAACTCTGGACTGCTTCTGGACCTCAGTTTCCTCATCTGTATGAAAGGAGGTTTGGCTCAGCAGACCCTGAGAACTCACCCCCCTGGACTTCAGTGAACTTGGACCGCTTCATGAACTTGCTCCTGAACACCCTGCATGTGGGACTGTTGCTGAACCTAAGGGTTCAAGCTGGCAGTTGCATAAGACTGTTGGGCCTATGTGAGGATGCAGGTGGTTAGTGAGAATGCTCTGAAGATTGACAGCCAAATGAACTGAAGCAATCTGGAATCTCCAGGCCTATCTGCATTTCAGAGATCATTGTGTCCATTTTAGGTAATGTGATTTCTAAAGTATAAATATATGTGATTTAATTTTTAAGCATTTGTGTTCTGATACTTGATATGTAGCTTTGGTTTTGTATAGAGCATTAAAATGTCTCTGGTTCATAAAACATGACCATCCGGTGAGCCTTCTCTATTCACTTGGGTTTTGCAAGACTTCTAGGCACAGAGGCTTGTTTCAGGGAGGCAGCATCAGCTGAAATATCAACAGCTGTTATTTCCTGGGAGAGGTTAGGTTGTTCAGAATCAGCATGTAG EMBV3_15090 TCCAGGGCCAAAGGGTCACTCTCACCAATACAAAGGGTACAACAGGTGGGAGGGTAGAAA Gene GeneID:506423|SLC37A4:XM_002693128:562_cdna Constitutive 0 NULL GeneID:506423 15 GENE SLC37A4 G6PT1 solute carrier family 37 (glucose-6-phosphate transporter), member 4 EMBV3_01893 GGAGTTGCGGTCGGATCTATGACTGCTGATTCCCTTGAAGTAGCTAGGAAAGTGAGTGAC Gene GeneID:536335|KIF27:XM_002689807:112_cdna Constitutive 0 NULL GeneID:536335 8 GENE KIF27 NULL kinesin family member 27 EMBV3_34087 ACCTGTAAGGCTATCACAGCAGCTGGACAAAGTCGTGACAACCAATTACAAACCTGTTGC Gene GeneID:509259|GTF2F2:NM_001038064:70_cdna UTR3_Alt 3 NULL GeneID:509259 12 GENE GTF2F2 MGC133695 general transcription factor IIF, polypeptide 2, 30kDa EMBV3_21121 ACGTGCAGCACTTACTCAAGAAGGACAAGGAGCACCTGTGGAAACTCATCCACGAGGGGG Gene GeneID:532512|POR:NM_001035390:248_cdna Constitutive 0 NULL GeneID:532512 25 GENE POR MGC127752 P450R cytochrome P450 reductase EMBV3_24682 TGTCATGGAAGTTTGGAGTCTCAGGGTTGCCGATTTTCTGCTACAAGAGGGGAAATTGAG Gene GeneID:100137827|ZNF828:XM_002692005:127_cdna UTR3_Alt 1 NULL GeneID:100137827 12 GENE ZNF828 NULL zinc finger protein 828 EMBV3_01476 CATCATCATGGGCGTGTTCACGCTCTGCTGGCTGCCTTTCTTCCTAGCCAACGTGGTGAA Gene GeneID:281604|ADRB1:NM_194266:6_cdna Constitutive 0 NULL GeneID:281604 26 GENE ADRB1 NULL adrenergic, beta-1-, receptor EMBV3_20195 GAACACCACCCAGAAGTTACAATGCATCAAGAAGATCTCGTAGTTCCAGCAGGGAAAGGC Gene GeneID:100337332|LOC100337332:XM_002696301:51_cdna UTR3_Alt 2 NULL GeneID:100337332 20 GENE LOC100337332 NULL splicing factor, arginine/serine-rich 12-like EMBV3_15594 CCCAGAACACCGCACTCCGGAGGAAAGTGGAAGTGTTTCTGGAGATTTGGGCTTCGCGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20650 TGTACCTATCTATGATGGCTCCTGGGTGGAGTGGTACATGCGTGCCCAACCCGAGGACAT Gene GeneID:507313|MPST:NM_001034291:179_cdna Constitutive 1 NULL GeneID:507313 5 GENE MPST MGC129095 mercaptopyruvate sulfurtransferase EMBV3_01162 ATTGCCTCAATTTGCATGTCTTCCCGCAGGTATGGGGTAAGATGGCTTGTCTGCACCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11027 CGAGCGGCTCCTCCGGGCTCAGGTCCTGAGTGTCTATAGAAGCTGAGGTCCATCAATCTC Variant GeneID:511554|C24H18orf19:NM_001080259:83_cdna 93^560 3 EMBV3_42982 GeneID:511554 24 GENE C24H18orf19 C18orf19 MGC143384 chromosome 18 open reading frame 19 ortholog EMBV3_05590 GTCCAAGGCATGTTTGTACATGAACCTCTAGCCGGAAGTCAATTCTGGATCGGCTCACAG Gene GeneID:539960|STX11:XM_002690293:23_cdna Constitutive 0 NULL GeneID:539960 9 GENE STX11 NULL syntaxin 11 EMBV3_18933 GGAAGCATGGAGTCGTAGCCACTGGATCACCAGGGAAGTCCCAAAGCTGTTTCATTTGAA Gene BVV0102_458082 - 1 EMBV3_37660 GK000018.2:35146424-35159792 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20493 TCCAGTTACTTTGCACATCTGCTGACATCTCTGACTCCGACAGGGTTTGTGCTGTGGCCT Gene BVV0102_063352 + 0 NULL GK000007.2:83546394-83554314 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13841 ACAGCTGAGAACCCGTCATTACTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGT Gene GeneID:536054|RBM41:XM_002699883:122_cdna Constitutive 0 NULL GeneID:536054 X GENE RBM41 NULL RNA binding motif protein 41 EMBV3_17942 GAAAACGAAGATGACATCCAGTTTGTGAGTCAAACGTGTGGACGTCTCATACCGACTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42403 CAGTGAACGGCGGAGGCTGTATCCCCCGAGTATTTGCTGAGCTGTTTGACCCTGTGATCC Variant GeneID:281692|CKMT1:NM_174275:124_cdna 317^516 1 EMBV3_37946 GeneID:281692 21 GENE CKMT1 NULL creatine kinase, mitochondrial 1 (ubiquitous) EMBV3_38221 CCAGAGAGATTTGTCTCCATTCCCTGTGTGCTTGGTCAGCTACACGTCAGCTCAGAGAGA Gene GeneID:786324|LOC786324:XM_002697322:5_cdna Constitutive 0 NULL GeneID:786324 23 GENE LOC786324 NULL similar to enterocytin EMBV3_01640 AAATTCTAAGTTTCATCCTGGCCAACGTCAGCCTCCTGGGCACTCTGTCTGTGACGGCTA Gene GeneID:619067|LOC619067:XM_002690448:314_cdna Constitutive 0 NULL GeneID:619067 10 GENE LOC619067 NULL similar to olfactory receptor C6 EMBV3_17905 TGTGGGGCCAGGGTGATAGGATCGAGTCTCTCAGTGACCAGGTGCTGCTGCTGGAGGAGA Gene GeneID:782820|EGFL8:NM_001099187:222_cdna Constitutive 1 NULL GeneID:782820 23 GENE EGFL8 MGC165955 NG3 EGF-like-domain, multiple 8 EMBV3_04586 GGGCCTTCCTGAATCACCGAAAGAACAAGTTCCAGTGTGGCTTCGGCCTCACCATTGGCT Gene GeneID:510219|TOMM40:NM_001075438:175_cdna Constitutive 0 NULL GeneID:510219 18 GENE TOMM40 MGC139121 translocase of outer mitochondrial membrane 40 homolog (yeast) EMBV3_01548 GCTCATCTCCTGAAGAGCCCACATGGAAAACCGAGCATCCCAGCCTGAAGATTGACAACT Gene BVT0101_025942 + 0 NULL GK000011.2:29115065-29200520 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21265 CCAGTGAGTGAGCCAGGCACCTCTTGAACAGCTCACACACTGAAGTTATTGCTTGTGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12786 AGGGGCGTCCAGGGCATCCGTGGGGAGACGGTGAACTGCCTGCATACCCTGAGCTACCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29594 TTCTTCCTCCTGTGCTTGTTTAAATCTACAGGCTCCACCCCTCCTGGGAACAAATGGGTC Gene BVV0102_051593 + 0 NULL GK000017.2:56168051-56173048 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075594 TCONS_00075599 TCONS_00075598 TCONS_00075595 TCONS_00075596 1 XLOC_046616 Coding TCONS_00075595 XLOC_046616 Coding Coding CAMKK2 17:56136286-56172518 j TSS56966 6279 1 TCONS_00075595_3 491 0.0625895843287148 14 0.827081780795451 0.000308372626885502 3.47680438909493e-06 0.000758961742055435 0.00051763405686965 0.00073643795376822 0.000719259664452919 0.000109065973591832 0.000161615674610846 0.000692680655571169 7.32792820687528e-18 9.199070726837e-05 8.69102626928163e-05 0.000573456478910719 0.000257428573853658 0.000132817781276031 3.06729853332677e-08 2.42111415785577e-28 6.76351721146875e-35 0.000899655396288818 0.000727778810145849 1.66425338242133e-10 2.10179315210226e-15 1.86881467518007e-31 3.02141754195922e-34 0.00123281233383563 0.000513326647531771 0.000457723813561169 0.000100973131933274 4.30303871940143e-05 2.51443746621409e-33 XM_005217779.1 CAMKK2 PREDICTED: Bos taurus calcium/calmodulin-dependent protein kinase kinase 2, beta (CAMKK2), transcript variant X4, mRNA. 0.0 3128 100.00 0.275999362955885 XM_005253824.1 CAMKK2 PREDICTED: Homo sapiens calcium/calmodulin-dependent protein kinase kinase 2, beta (CAMKK2), transcript variant X3, mRNA. 0.0 3802 78.26 0.74374900461857 TCONS_00075595_3 sp|Q96RR4|KKCC2_HUMAN KKCC2_HUMAN Calcium/calmodulin-dependent protein kinase kinase 2; 0.0 783 85.29 0.932790224032587 3 coding 1 1 1 0 -0.197596717216131 0.152428035664219 -0.0374860085266467 0.575928582076326 CGCTGCTGCCGGATGGGAGTGCCTGGGCGCGTCTGTGTTGCACGAGGTCCGCACATGCACCATGTCATCATGCATCTCTAGCCAGCCCAGCAGCGACCGGGCCGCCCCCCAGGATGAGCTGGGGGGCGGGGGCGGCAGCAGCAGCAGCGAAGGCCAGAAGCCCTGTGAGGCTCTGAGGGGCCTCTCCTCCCTGAGCATTCGCCTGGGCATGGAGTCGTTCATCGTGGTCACTGAGTGCGAGCCGGTCTGCGCTGTGGACCACGGCCTGACCCGGGACCGGCCCCTGGAGGCCCATGGCGGAGAGATCACCCTTGACGCCTCGGGGTCTCAGGCCCGGCCCCACCTCTCTGGTCGCAAGCTCTCTCTGCAGGAGCGGTCCCTGCTGGATGCCAACGGGCGCTGCGTCTATCCGGCGCTGCCCCACTCGCCAGTGGGCTCCCCGCAGTCCTCGCCACGGCTGCCCCGGCGGCCCACGGTGGAGTCGCACCACGTCTCCATCACTGGGATGCAGGATTGTGTACAGCTGAATCAGTACACACTGAAGGATGAGATTGGAAAGGGCTCGTATGGCGTGGTCAAGTTGGCCTACAATGAAAATGACAATACCTACTACGCAATGAAGGTGCTGTCCAAAAAGAAACTGATCCGACAGGCGGGCTTTCCACGTCGCCCCCCTCCCCGAGGTACCCGACCAGCCCCTGGGGGCTGCATCCAGCCTAGGGGCCCAATTGAGCAGGTGTACCAGGAAATTGCCATCCTCAAGAAGCTGGACCACCCCAACGTAGTGAAGCTGGTGGAGGTCTTGGATGACCCCAATGAGGACCATCTGTACATGGTGTTTGAACTGGTCAACCAAGGGCCTGTGATGGAAGTGCCCACCCTCAAACCACTCTCTGAAGACCAGGCCCGTTTCTACTTCCAGGATCTAATCAAAGGCATCGAGTACTTACACTACCAGAAGATCATCCACCGGGACATCAAACCTTCCAACCTACTGGTGGGAGAAGATGGGCACATCAAGATCGCGGACTTTGGTGTGAGCAATGAGTTCAAGGGCAGCGATGCCCTTCTCTCTAACACTGTGGGCACCCCGGCCTTCATGGCTCCTGAGTCGCTCTCGGAAACCCGGAAGATCTTCTCTGGGAAGGCACTGGATGTCTGGGCCATGGGTGTGACACTGTACTGCTTTGTGTTTGGCCAGTGCCCGTTCATGGACGAGCGGATCATGTGTTTACACAGTAAGATCAAGAGCCAGGCTCTGGAATTTCCAGATCAGCCTGACATAGCCGAGGACTTGAAGGACCTGATCACGCGCATGCTGGACAAGAACCCCGAGTCGAGGATTGTGGTGCCAGAGATCAAGATCCTGGTGAAGACCATGATACGAAAACGCTCCTTCGGGAACCCGTTTGAGGGCAGCCGGCGGGAGGAGCGTTCCTTGTCAGCGCCTGGAAACCTGCTCGGGAAGCAAGGCAGCGAAGACAGCCTCCAGGGCCCCGAACCGGCCCCCGTAGGGGACGAGGAAGTGCTCTCATGAAAGGCGGCCCTGGCGTGGAGAGTTGGGGGGTCCCAGGCCCCTGCTCCCTAGAGCACACTCATCCTGCGCGGCCGGACGAGGTGATGGAGTAGCGCCGGACCGCGACTGCGCATGAACGTCTCACCTCTGCTGGCGCCGCCCTGTGTTTCCATAGCAGCATGTCCTACGGGAAACCGAGCACGTGTGTAGAGCCTTGACAGTCATCTCTGGTTGTTTTGTTTTTAGTTTGTTTGATTTCTTTCTTGTTTTAAAGGGGACAAAAAAAAAAAAAAAAGACGACTCCATGACATCGACTTTGGCCGCTGGCTGGCTGAATGGGCGGGTGTGAGGAGTTGCAGACCCAAAGCCTCGTGCATTGGGGGACAATTGCTTTTTAAGACGTTTTTATGCCAAAAATCCTTCCTTGTGAACTCAGAATGGTGTTAAGAGATACCAACTGAATGTGTGTGAGGTTTGAACATCGGGAAGAACTGGTGGGAAACTCTGGTGGTGTGGTCCGAGGCCACAGTTGGCTGCATTTGAAAGGGAGAGGAAGAGCAGGTGTGACTTCGTGCAAAACCCCAAATCGTGGCACATTCTGGAATGTGGATTCATGGAGTCAGGACAGGGCTAGCCCTCAGTAGATGCAGCCTGATTCGACCCAACTTATTCCTAAGAAGGACTATAAATCTTTTTAATGAGTAGAGCTGTAATCAGGAAAACGGAAAGGGCTTGATACATAAGAGCTTGCCGGGGGCGGGGGGGCGGGGGTGGTGCGGATTTTGCATTCCCAGAAGGGCATTTGGTGGTTATGGTGGGACATCTCCTCTCAAGGACTGAACGAGTGTGTTGATGACAGCCGCTCAGAGCTGAAACTTTTCTTAAATAGTTGAAGGGGCTCTAGTCAATCTCCTGTTAAATTACAGAAACTTCAGGGTGAAATTAAATCCTACACTTCCATGTACATTACATGGCTTAAGAGTAAACAACAACAACAAATACTTTCAATTTTCTAACTAGTCTGAACTCTTGAGCAGTTCAGAAATCATTTCGAGCTTCCAGGAGCTATCCCATGGCTTCAGGTGTATGATCAGAGTTAGCGCCAATGACATCTATCCTGTATATTAGCAGCTCAGCTTGCTTATAACCTGTGTATTCTAGAGGCTGCTAAGATTCTGTTTTCTTTTTCAGCAGTAGCTGATTGTTGTAGTCAGTGAAACAAACAGTTATCCAGTTTGTGGAGGGCTAGTTAAGAAGTACTTTCATTCAGCTGAGACATAAATGATCATCCTTATTGGCAAAGCTCTGTTAGGATCTAAACAATAACTATAGGATACCTTTTAGAGAAGATTCTTGAAACCTAGAGCAGTCCTCGGGTCCAAGGCAACCAGAGCTTGGCACAGGAAGTCCCCTTTTGTAGCCAGCATTCCAGAAAGAAAAAAGTTTACGTTTTTGACTTCCAACTAACATTGGGAAGTTTGGTTGCAGTTCAAGTGTGACTTCTTCCAGGGTCCCGTGTGGGTAACTGTGAAGTTCAAGAGGGAGGAAAATTGGAAGGACTTGGCCTGGGGGATTCCCAGTGCTTTGTGGAATCTGCCTTGAGGAAAATAGTGTCGGTAATCAGGATCAGAAGTATGAGCTCTCCTGTAGCTTCTGGCTGATCCCTGTTGAAAGGGGCACTTTCTGCAGAGACAGAGCAGCAGGTCTTGTGTCTGCTGCCAAGTGTGTTCACAGAGCTTCCACAGATCTTCGTAAGCTCTTGACTGTCATTTAGCCAGACTCTTCTTTCTACCTTATAAGCAGTACAGAGTTAGAGAAGGCTGGTTTCCTAGAGCCAAGGACACCCATCTGATGGAGGGTCCTCTGGCCTGCTTTCTTTATTTCTGTAATCCAGTACTTCTTCCTCCTGTGCTTGTTTAAATCTACAGGCTCCACCCCTCCTGGGAACAAATGGGTCTGGTTAGTTTGCAATAAGCACCTTGCAGTGGTTCAAGTCAGCCGGCTCTTCGTCTTAGTCCATGTGGATGCTGACCTGGTAGTGGGGGGCTCGCCCGGAGGGGCGGGGCTGGTAGCATGCAGAGCCTCTGCAGAACTCCTCCTGTGTTTACACAACTGCATCGGCAATGCCATTTCTCCCACCATGAAACTCTCCGTCGAAGATTTCACATGTGGAAAGCCAGCGATCAGACCGCACTGAACTGTTCAGGCAGGTGGGTTGGGGGAGGCCCATGATCATTACTATTTTTTTTTTTTTTAAACACTAAGACACACCAAAGAAAGCTGTGGAAAAGAACCACCCCACTGAGCAAAGGATAAGCAGAGAGGGCTGTAACAAAAAGCATTAGAGCTACTTGGAGTGCAGATTCTTGGGGTTTGTCTACACTCCTTAGAGCACAAACATTGATTTTTTTCCCCAAAACCCAACTCTGTCAGGAAAGGGCAGAAGCTGATATGAGCAACTTTTCTAGGTAAGCAAAAAAGGATGCCTATCCTTCTCTTCCATTACTGGCTCATCTGTGGGACCAATTTTTAAGCAAGCAGTGGCCTGCACCTGTGGCCTTGAAGAAGCACATGTTCTCTATCCATCTTTCTTCCGCCCTGTTTCACTTCCCCATCTGTTCCACAGCCTGGCCAGTGGCTCCCACAAAGCCTTATCTAGCCCCTTGCTGGCACTTGGGGCCGGAGAGGCCGTCTACCCGCTGGTCTGGCCTTTCTCGTAAGCTAGGGCTCTCGTCCTCCAAGCCTTTCAGGACGAGGCGAAGAACTGTGCGATTTAGACACATAGGCTCCACCTGTCGCTCTCACCCATCTTCCAAAGGGGAGCTTCTTGTCACCAGGGGGAAGAACCAAGACCTCCACTCGCTTCCAAGGTGCTAGGGAAGGTTTCAAGGTCGTTGATTTCAATCTTCTCTCCAGCTTTACAGGCTGAGTTTCATGGGACTACTGACTTTTCTATTCTGTGGTTGATTTCATGCCCGATGCTTCTGTTTTATTCCTGATCCTTTCTACTATGCATTTTCCTTTTATCAGGTGTACAAAGTTAAATACTGTGTATTTATCACTGAAAAGTACATGAATTTAAAAAATAAGCCTTCAGTGTTTTTCCACAAATGTTTAAGCTTCTCTGTAAACTTGAAATAAACAGCAAAATGGTGCAAAGTCTCGGCCTCTTGGGGATGGTTTTTTTTTGGTTGTTTAAGTCAGTGGTCTTGAGGTCGCCTGTCCTCATGTCTGTTTGCCTTCCTTAGGCTGGCAGCAAAGTTGAATGCCCGAGTCAGGGCTGATGTACTCAGCAAGTCCCTAATTTAAGCATGTCCTAGTACCTCCCTGGGTCTTCTTAGTGGCGCAGTGGTAAAGAATCCACCTGCCAATGCAGAGACGCAGAAGATGAGGATTCGATCTCTGGATCCAGAAGATCTCCTGGAGTAGGAAGTGGCAACCCGTTCCAATATTCTTGCCTGGAAAATCGCACGGACAGAGGAGCCTGGTGGGCCACAGTCCATGGGGTCAAAAAGAGTCGGACACGACTGAGCACGAGAGTACCTCCCTACTGAGAGGGTGGTCCCCACGTCAGCAGTACCAGCGTCACCTGGGAGTGGCTTAGCAATTCAGATTCACAGGCCCCATTCAGACAAGGGCCCCAGGTGACTCACTTGATGCTGAAGTTTGCAACGCACTGCTCTGAGGCAGCTCACTGCCAGATAGAATCTTCTGGTGGAGCCCAAACAGGTGAGCCGCTATGGGAGCAGTTTTAATCACACACTGAATACATCTTGTGGGCAGTCATGCTACGTGACACTCCACCGCATAAGCTGGGTATTGAGCCCATTTTACGGGTCGTCATCTGTAAACAGGCTCAGAAAAGGCTCCGAATTTATCAACTAATTCAGTGTTCTGCAGAGCCTTGATGGTTGCCAGTTTTCATGACGTCTGGAGACTGTTTTAGAACTGCTGCTTTCTCCAGACTGTGGGCTGAAGGTTCCCTGCACTTCAAATGTGAATCCAGCCCACGGCACTGCGTTACTGGCTTTGAACTTCAGTTCTCTGTTATCAGGGGACAGTGGATGAAGTCTGAAAGACTCCTGTTCTGTTATTGCAGAAATAACAGCCCTGAAATACTGGCCTTCAAGTCAAGAGCAGCTGTTGCTATTTAAAGGCTCCCCTCCCCCCATGGAGAATCTGATGAAAGCGAGAAGAAATGCCCACAGGTGCCTCACTTTGCAGAGTTTTAGGGGTTTCAGAGTCTCCTGGAAGGTCATCCATGGGTGCAAGGCTGAAAAAGCTCTACTTAAGAGGCAGTGCCAAGGAGTGCCAACAAGCGGGGCTGTTAGCAGAACACAAGGCAATTCTGGCGAGTTCAAGATCAGTGCCCCAGCCCTCACCCCATCTTTAGAAAGAGGGGGCATAAGAAGTCTCTCCCACTCCAGCAACCATGACTCCTTAGCCTGCAAGAGAATAAACTTTTCCTAAACAGTCCAGCTCCATGGGACCTGTGTATTCAAGCAGGCATTTTTCAAAAACAGTAGCTCAAGGGACTTCCCTGGTGGTCCAGTGGTTAAGAATCTGTCTTTCAATGCAGGGGGCATAGGTTTGATCCCTGGTCAGGGAACTAAGATCCACACTGTGTCCCATGGCTGGGGGGAGAAGGTAGCTTGAACCAAAACTTTTTCAAAGGGGTTGGTAAACTTTTTCTTTCCCTCCCAAAGCAAGAAAAGCCCAGGTTGTCATTTACCCCACAGAAGCAGAGCACTTCTAAAATAAAT EMBV3_37652 GGGCGAGAGGTTGGGCATCAAGCCCGAGAGGATGCTACGCGAAGAACTTTGGGCCCAAGG Variant GeneID:539381|CSRP2:NM_001038183:11_cdna 283^506 2 EMBV3_12599 GeneID:539381 5 GENE CSRP2 MGC133755 cysteine and glycine-rich protein 2 EMBV3_18191 TTACAGGCATGGTGGTGCTCTACAGCGCTGTGGTTCCTGGGCTTCTCAGTCTTCCTGCTG Variant GeneID:615893|CYBASC3:NM_001099149:109_cdna 439^647 2 EMBV3_36708 GeneID:615893 29 GENE CYBASC3 MGC166426 cytochrome b, ascorbate dependent 3 EMBV3_19729 TCCTTCAGCGTGTTCCGTCCTGAGCTCGTTGCCTTCCCACCACCAGCCTGTTTCATCTTT Gene BVV0102_211853 + 1 EMBV3_03514 GK000016.2:1878609-1964326 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068463 1 XLOC_041701 Coding TCONS_00068463 XLOC_041701 NonCoding Coding - 16:1929212-1934734 - TSS51259 379 1 TCONS_00068463_1 84 3 0.931896395580511 0.000287192081852677 0 0 0 0 0 0 1.56060553692384e-05 0 0 0 0 0 0 0 0 4.38056356746445e-05 0.000264811554483598 3.91425441029979e-05 0 0 0.000215375731468657 0 0 0 0 1.54594953910311e-05 0 0 0 0 noncoding 0 0 0 0 0.0586826077759476 0.635250929966997 -0.0197402247532057 0.806458300841451 GAGAAGTCAACCTGCTGGGTGCATCCTGGAACAGCATCGCCCATCCAGAGCGGACACTCCTCCTGTCCAGGTTTGCCCAAGGGCTGGGAGATGGATTCTACCCAGGAAGGAGCTGTGTATTTCATCAACGCAGAGCCTCTCCTGAGCGCCTCCTTCAGCGTGTTCCGTCCTGAGCTCGTTGCCTTCCCACCACCAGCCTGTTTCATCTTTGTCGGAAGTGCCAGCAGCGCAGAACCCTTGGGCCCCTCCTCCAGAGGTCCTGTCAGTTTTCCTTTTAAATATCCCTCAGCACCACCACTTCTCATCATCGCTGTGGCCACCACCGTCTGTGAACACAGACACTGAACACCACAGTTCAGTTCTTCGGCGCTCAGCTTTC TCONS_00068457 s 3' 1931 TCONS_00068457 s 5' 0 EMBV3_32362 CAATCAGAGGTGGTCAAGGAAGGTTGCTCCATCTACAACCGCTCAGAGTCATGTCCAGCT Gene GeneID:539662|CD164L2:NM_001076180:245_cdna Constitutive 0 NULL GeneID:539662 2 GENE CD164L2 MGC133635 CD164 sialomucin-like 2 EMBV3_19661 CATCCACAGCTTACTCCCTTCTGTACAGAGGCTCCCAGGACAGTGCCAGTACTTGGGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28058 GACTTTTTGGCCATCAGCCCCCAACTCCTGTACTCAAACATGCAGGTAATAGATGTAGCC Gene BVT0102_091606 + 0 NULL GK000016.2:33172680-33181537 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069041 TCONS_00069043 TCONS_00069044 TCONS_00069042 TCONS_00069045 1 XLOC_041848 Coding TCONS_00069044 XLOC_041848 Coding Coding FAM36A 16:33173315-33188176 j TSS51558 9223 4 TCONS_00069044_1 69 3 0.379542395693136 9.03119311008628e-73 8.83450328660264e-68 5.23360660847543e-45 6.16527599119056e-79 7.01345276248168e-06 5.59700429756163e-75 1.57569823637891e-74 1.13203020958738e-32 5.0997222693992e-05 0.000266428717972402 0.000214697914590209 0.000186340645703131 4.64521782748764e-05 0.000168462772689126 0.000125667620632298 0.00238478777959212 0.00289264791060733 0.00232262497632677 1.67435482099357e-13 7.80931396240699e-37 3.54543392615893e-60 0.00104184415620166 0.000587668936467715 0.000775826010012809 4.90119267377162e-38 8.62206916054109e-221 6.74435337072065e-282 0.000274579299542416 0.000204801318468393 0.000298036999085828 XM_005216842.1 COX20 PREDICTED: Bos taurus COX20 Cox2 chaperone homolog (S. cerevisiae) (COX20), transcript variant X1, mRNA. 0.0 1552 100.00 0.0931367234088691 NM_031844.2 HNRNPU Homo sapiens heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) (HNRNPU), transcript variant 1, mRNA. 2e-103 383 73.01 0.0738371462647728 TCONS_00069044_1 sp|Q9D7J4|COX20_MOUSE COX20_MOUSE Cytochrome c oxidase protein 20 homolog; 5e-38 125 78.95 0.985507246376812 1 noncoding 0 0 0 0 -0.0537070896456945 0.618432615346028 0.0160431593352177 0.819779749633993 AAAGGCGGGAAAAGGCGCAGCCTCGAGTGCCAAGAGCGCGGGTGCATGGTTGCTTCCCTAGCCCTCCTTCGCCTCTTCTCCAAGCCTTCAACCTGGGGAAAGCCCCGGTGAAGACGTGATCTGTTCAACTGAACAAAGGAAATGGCGGCCGCACCCGAGCCCTTTAAACTCCTAGGAATTTTAGATGTTGAAAACATTCCCTGTGCTCGGGATTCGGTATTATATGGCTCATTAGGATCTGTTGTGGCTGGCCTTGGACATTTTTTGTTAACTAGCAGAATTAGAAGATCATGTGACGTTGGAGTAGGAGGATTTATCGTGGTGACTTTAGGATGCTGGTATGAGTGTTAAGTATTCAAGAAGATTTTAACAGGTTAATCTAATTCCAAAGCACATGCTATACTCAGCAATCTCCCACTGGGAGATTCCCACCCTTACTGAAGATTATCTTACAAAACGATATTGCTGGACTGCCTTTAATCTTTTAAGATATCTATATATACACATGTGTTTTGTGTCATTTGTCAAATGAACAGATGAATGTGACATCAGACACTGCATTAATGCCACGTCAGGGTTTATACTTCATTTAGGAAGGCCTCAATCTTTTATCCTAATGCTCACTTCATCCCTGCCTATGGTATATACCACTGACAGTCATCTGTAAGCTTTTAAAAATTTCAAATTAGTTCCCATAGGTATGTTATATTGGTAATTTATTCACGTTCTCCTTACTAGGTTCCACTGTAGGTATAATTATGCAAAGCTAAGAATCCAGGAAAGACTTGCCAGAGAAGGAATTAAAAACAAGATTTTATACGAAAGTACCCACCTTGATCCTGCAAGAAAACAAACCAACGGCGGTAGCAGCAGCAGCTGAGCAGTCTTGAGCATAGAAAACCCAGACACAAGTCACTCATTGTGAACAAAGCTGAGATGAACTACAGAGAACATTTTATGTACCCTAAGATGGCTTTCAATCAAGTAAATGTGTAAAAGTATGTGTAAGCTGCCGTCTTTTTTACACGTGTCAGTATTTACAAACTTATTCTGGCCCTGTATCTACTGTCAGTATAGCATGATGGGCTCACTTCAAATAATCCTTGTGTTTAACTTGCTTAGAAAGTGTTTCCTTATAGTAAGGAGAGAGTACACCTGATGTCTCAAGAAATAAAATCTTAGTTGGATGTTAAAACTTGCCTTAAAAACAGAAGTCCCAACTGTATTCCTGTACCCTGTTAAAAATGAAGGGACACTTTCTGGTCTTTAAAGTCAGTGCTGTTATATCAGACTTAAAACTAATGGATCATCACTTTCCAATTGTTACTTTTAAAATGTACCCATTGCTTGACTGTATTCTCCCATTTTAACAGGTGAGTTATCTCTCAGAAAGGAAATGTGATTTTTAGCTGCTCTAAATATTTCTTGAAGTATGCAGGGTTTTTAAGTAGAATTTAAACTTGTACATGGCATGCACAAAAATATCTTCTGAAACTTGTGTGGTGCAAAGGAAAAAGAATTGCAAAATTAAACATGTTGTTGTTCCATTATGTAAAGACATTTATAATAATAAATTGGCTGCCATTAAAAAAAAACACCCAACACCCAACTAAGCCCAAAGCATTCACTCATTCATTCATCCATTTTTGGTTTTGGTAAATACCAACATTAAAACACAAGCTTAGAGGCCTTCCTAGTTAAGGAATGAACACTGGTAGATAGAATTACAGCATTATTTTTACGGGCCTATCGATTATCATGGTTAACTAAATAGAGGAAGGAAGAGATGTCTTGAGACTTACGTCATGCCTCTTTTTAGGAGGTAGGGCTTGCTCCAGTTCACTTCATGAGAAAGGTACCATTTTCCCTCCTGTGCCCACCTTCTTCCGGCTTAGGATACACAACTGTTTATGGTTTATCAAGTGCCATCCGGATCATGAGTGACACTGTCAAGCATGTACACAAAATCTGGGATCCCCAACCCCAGGATCAACACTGGTTCATGGCCTGTTAGGAACTGGGCCACACAGAAGGTGAACAGTTGACTTCCACGAAACCAGTCCCTGGTGCCAAAAAAGTTGGGGACCACTGTTCTGATCTTTATTGATCTTAATTATCTGGCCACCACCACAGGGAGAACCTTGGACACTGACTGGAGAACTAAGTTTCGCAAGATCACCTGCCTCCTGTTACTGGCGTAAATCAAAGCTCAGTGCAGTCTACATTATTCAAATTGACCTGAATAACTATGTGAACAATTCATGATGTGACAGCCATTTGTTCTAAAGGGCAGGGTAGGTGGGAAACTGATGAGAACTGATCATATTTTAATAACATGTAACATATAAAATCAGGCCAATGGATTAAGTAACTAAACCCCTTCCAGCTCTAGCACACTATTATTAAATCTTACCCCAAGTTAAGAGAAAAATCTCTCGGCTGGCAAAAATTTCCAAGGCTTTCACCAGTAACAAGGTTAGTTCATTTTCACAGAAGACTGCACAAACTGGAGACCTGGATAAAAACACAGGTTTAAATGCTTACTTGGATTACTTATGTCATTTCATAAATTTACAGTATTAGCACGTTTTCTTCTTGAACTATTAGGATGATACAAAATGAATTATTGGATCATGTAACACGCTCTAGGCCCATATCACACATTGCTACTAGATACTTTGAATAGGGCCTCCAAGTTGATCCTGACACTTCCACTTCTGGTTCCTGCAGTCCAATCTTCTACTCACCATCCAACTTCAAGCTGGTAAATCCTGCCAATCCTATTGCCAGTGTGCCTCTGGCTCACCATGAACTCACCTCTGCTCACTTCTTCGTTTCACTTAAGAGTACCCTTGTCCTATTTTCTCTCTGTGACATCCTATTGCTCACCAACTTCTACAATTAGGTTCATCATCATCTCATGTAGGCTCTCATATTAGTTTGTTTCATCTGTTACACCCACAGTGGTAGACACTTGCACTGGTCACTGAGTATAGCTAAGAACCCTGTCAATTTTTATCTTTACATTCCCATAGTGTCTGGCATAAAGCAGTTGTCAGTTGAATTATTAAACATTCACTAATCCCTCTCATCCAGAAGCTTACATGCTTTTCACACTTAAGCTGAAAGAGTAACCTACCTTCCAGGCCCATATGAAGGCTTCAGCTGCACTGCTTCATTATTCCATTAAATCCGATTTTTCACACTACGTGATATAGCAGTAGGTACCAGCTAAATAGCTGATTAAAATAGAATTGTCGTCATTAGTAGGTTTAAAACTTTTCGTGGCTCATCTATCATACCTACTATCTTTAAAGTGCTTTATGCAGTCCCCCTCTTCCCCCACCCCTCCTTTTCCTTGTTTTACCTTTCAATAAAAGAACCTCAGGGTTTTAAAATTAACTGGCTTTTCTCTGGACTTGTGATTTATATTGAGCAAGTTTGCCAACAAATTTGACTATCCTTAGTACCATTATTTGCAAGCATCTCTCAGGCTACGTACCTCTACTCCATCGCTGGTTTCCCTTTGCTTCACTTTTATAATGCGAGGAGGTCTATATAATAAATTCAGGATTCCTGTTTATGCACACTTTTCAGCAAAATGCTAGGTATCAAATAGGGTTTGAATCCTTCTATTCCTAGGTAAAAATCTGGTGGATGGGGATTAAGGCACCCCTTAAGTCATGTAAGGTACATGACTGTGGGAAAGCAGAATACCTTAATGAGGAAAGTAGAAAAAGTACAATGATTGTTTTAATTGTAGTTTTTAATGGTCCTCTAGAATAAAATCTCTTTTGGAAGCATCTTAAAAATACGGTCCATTGGTCATCAAATCAGGTCAGTGCTATCTTCTACCACCCAAATACTGTTATCTTTCACAGGGTATTTTTGTGTGTGTGCATTAAGTTCAATACATAAATTTTCTCTGAAGAGACACGCTTTAGGGACAAATTACACAGTATTTTTCAAAGTATTACATTTCAATGTTTATAATGTAGGTGCTACTGATCAGTGTTGCAAACATTTTATGAGTCTTTTCGACCACTGCATTCGCCTTTTATTTTCTAGAGATTATAGACTTTGCAAGTATTTATATATCTTGAGAAAACTACCACTGACTGTATTATACAGTCAAAGATTTCTGTTGTTCACTTAATGTTCACATGGGCAGTTATCTGTTCCACCTTTTTTCTAAGAATAACTTCCAGAGTTCTGTAAGTTAGTAAACACCTATTTTATGGCCCACCCTTAGGATATTCAAATCAACACAAACTGGTTTCCTACAGGGTGAATTTTCATTAAAATGTCTTCCTCCTTAGGCCCCGAGGACAAGTCATGTGAAATGAAACGTGTTTTACTATCTAAATTCTAAGCCTCCTTTAAAAACATTTTCCTAGTTTTTGTTTTTTTCCTCCAATTAAAGGAAGGGTTGTGAATTTTACCTTTTACTCTAAGCTGTCTGCTCTTCAAAAGCCATTAAGAGATTGACAGAATAAAACTGTATTTGAGGAAATCCTGATATTTTTATTTCCCATCGGTATAGCACCCAAGTCCTCTCCTCTCACCAAAACACATTATTCTGAAGTATGTAGTGAGGGAAATTTCTTCCTAGTTTCATACATGCTTCTGAACTAGCATAATCAAAGTCCTTGTCTTAGATTTCAATTCCTGGTTTAATGGACTTTTGATATAAATGTACATCACTTCATTATCCAAAAGATGGTTTTCCAAGTTTTTTAAGCTGCTTATTTGTGCATTTACCATAGCTGCAGGATTGTGGGAACCCAAGGACATAGGCATTCTAGATTTCTTTGCATTAGAATACTCTTAAGTATTTAAACCAGAAGTAGAGTGTTGAGACATACAAAACATTAAACAGAAGGAATCTGAACCATGAGAATGAGATAATCTCAAAAGGACTTGGCTCTATTTGCATGTACTGCCTCTAATCTCTACAAGAGGACCACCAACTAACATTCTACTAAATATGCTTCACATTTCAGGTATACAAAGGAGCTGTTAGAAGTTTTTTTTCCTTCTAATTTAAGACAGATCTACCCACCTAGTTACTAATTTCTCCCTTTCCCATCTTTTTAAGAGTTCTAGTTAAGGTGAGACCCTGAAAGCCCAATATAACAAGTGTTAAACGTACAAGCAGCAATTAATTTGGAATACCTATTGGAATCACTGGAACACATTTACTTGGGCCCTTTTACTCTTCCACACAGCACATTCACATGGACAGACTAAGGAAAAGGAGATGAAACTTAAATCAGCACATTATCGTTTGCTTTATTTTTCAAAAAGAAAAAAAAACACCAAAAAACAGTAAGTTGGAATCTTCTGTTTTTCTTGACCATGACTCTCCCATCTCCCTTAACTAAAAGGGTACCTTAATAACAGCTAAGGTAAAAGATTATCCTGTCATTCAAGTAAGCTTCAACTGTTCTATGTATGCCTGAACACTTTTGAAGATTTCATGCCATGCAAGCTGTCTACAGTGCCTGTATCTCAAAGTTCTTGATTGCTTTTATCTTTAAAAGATTTTTCAGCTAATGTTAATTTGTGGCAATGCTTCTCAAGTGCTTGGCAAGTGTAAAATATTTTACTAGCCAAAACTAATTTTTACTTCCTTAAGATCATGTAATGGGAGTATCAGAGGACTGGCAGGAAGAACATGCAACAAGCAGTTAGGTGTTTATAGGTTCCAAACTCAATGCTAGCCTTCCAAGCCTGTCGTCCCTACAGTGTCCACTTGTGCAGATCCCCAAGGTGAACTGAACATTCGCAGTAATAACTGCTGTGCCACTGGTGCAGCACTGATTTTAACTCAAGCATTTAAGGAACTGAACCTGAACCTTTCCATATCCATCTGCCTGGACTGTTATGCTATCACTTTCAACTGTTTCTCATACCAACGAATCCCATTTTATTTAAAAGCAAAACCCCTTTCCTTGTCAAGATCCAAGTTTATGTTGATTCCTAGTGTAAGGAGAAAAAAATTACAATATTCGTAACTAGAACTGACTACATTAAGTACATGATTAAGTTCTTGTCCCAGTAACTCATCTAACCAGAGATTACAGATGTCCTGGCCTAACAGTTACCTACAACATTTACTCCCGTAATATTGGGCCCCCAATTACAAGGGAAACCACCACCTGTCTACATGTCAAACAGTACTTTTTCAGCTTCTCAGTGGACAGCACATTCTCAGCCTGATCACACCATGTACAGGTGTTACCTTTTTGAGTATTCTAGGTTAACCTTTTGAGTAATATTTCTACCTATTTTCAGTTTACTATTTCTCATGGACTTCATTCCTTGGGCAAACTAAACAGTAACCTATCACCTGAATCTCTGATTGGCTAGGATGTGAAAGTATATATATGTATGTATGTATATACTCTCACTTAAGTGTTTATCTTAGTTAGCCATTACCCTCCTACCTAAAGCTATTTTCTGAGGTCCACGTATTTCCATGGTTCAAAGTCACTACTGTGACCACCAAGATTAGCAGAATTTAAAAATTAGGTTATTACCTGTTCAAATGTATAAGCTTGTAATTTAGAATTAATGTTAAGGTCATGGCTTTTAATTTTTTGTATTGCAACACACTCAAGGACACACACTACAACCAACCAGTCCAGTAGGTCATTTCCAAATTAATTCTTAAGTATTTACTTTTTTATTATCAAGGTTAATAAGGACTAGTTAAGATAAATGTCACTTCAACAGTAGTTAGGGGAACAATGTATTTTTATTGTCTTGTAATCATGTACATGTAGTACGATTAATAGTACTAAGTTAAAAATTGGGCATTAGAACACCCCAAATAAAACTCTAGGCACTAAACTGGCTACATCTATTACCTGCATGTTTGAGTATAGGAGTTGGGGGCTGATGGCCAAAAAGTCACATCTCAAAATGATACAAGGAAAAGGCTCTCCACTATCACAAAATTATTGCACTCTCAACTATTTTAAGGCAACTAATGATTTTAAGAGACTGAAGTTTACATGAGTAGTAAATCCCAACCTTTAAGAGATCTGAAGCAGCTGCTAAGCTTCTTAAAGCTCTAATGGTTCCTTAAAACTCATGTGTAAGAAAGTTCCAATACATAAACTAAGCATTGCAACTTACTGCCAGGTCATTATCATACATCCTTACTTTCATTAAGTATTACTAAAATGTTAAAATCTAAACCCATTTTTGAGCTCCAGAGCCCCAGAAATATGAACAAGTTTAGATTCAAACATCTTAAGAATTTTAGAAAAATGGCTTCAGAAGAATCGGGTTCCTTCCAAAATGAGTCTTCTGGGTGGTTGAAAAGTGGATGACTTTTCTGTCCTACAGACTCCACTTTTTTTTAAAAAGAGACATTTTAAGTTATATGTGAATTATGAAAACTGAAATGTTTTGTGTGTCAAATACCAAAAACTTCAGCTTGGACTACCAAAATACAAGTTTATACCTTCCTTAATTTCTCCTTAATATATTTATCCTGATTTTGGCTTTCAAAACACATCAGAAACATGCTTCCAGATCTACAATCTTCCTATGTAAAAGGTGTTTGCACCACTGCCTTAAATACTATCAAAATATTGTTTGTGCAATGGAACCTGTTAAACAATCCTAGGATAAAAAGCCTGTTCATATATTAAGTTCATAGGAAATCATGTCAATTCAACTCCCACACCTGAGGCATACGCGGCACACAATCTTTCCATGAATGTAAATTCCTCAAGAGTTGAAAAATACTGAGTCATCTTTCCCTGAAAAAAATTGTTTTTAAGCTTAATACCTGTTACTAGCATTTAAAACTAGTTTCATTTATTTTCAGACAGGATCCTAAGGCAAATGAGAGCTTGTTTTCTACATTTAACCTAGCTTGTCACTTCAGTGTCAAACTGGTTGGACTCAGCCTTCATCCTAAGATCTCACCTTGCTGTTTGTGTATTAGGGCCACAAGTCAAGTCTCAGGCTCTTCAGTCAGAGCTGGAGCTCTCCACCCAAGGCCAGGTATGAGCAACAAGATGTAACCAACCAACAGAGATAACTTTTTGCAGTTTCAACTTTTATCATTTCTATCTTTATGCTGTTTTTGTACAAATAACCAATCTAATCCAATTCTTGTCTCAGGATGATTGTAAGTATAATCAACTATATACAGAAGTTTCTAGTGACAGCATCTCTTAAACAACAGTCTCACAGGTGAGACTTTTCTAAGAAAAGTGAGTTTTCTAAGGTGTAGTTGGGACATTTGTTCAGAAATTTATCCAGTTTTGCTTGCCATAGAGGGGATATAGGCAAGGGGAGAGGTACAGTAAACCAAGTTTTTTGTTTATTGATCTTGTTCTGCCAAACTTGGCATCAACTTTTTCTCTTGCTTGCTATATGGTGCACTCCCTAATTTCTTATATATTCTCCAGATTTGTTTCATTTTATACAAATGAAGACAGTAATAGTTAACAGTAATTCTGACCTTGAAAATGCTTCTTAAAACCTAACATTTTCTATCAACAGTCTTATCTCTTTCCCAAATTTTCTGTGCTACACAGGCACAACAAGCCTACAGAATTGTCCCCTGGCCATCACTTTCCCATTGCAATGATTAGAGTAGCAAAATACACAATTTTGAACTAGAAAGTATATCCAACGTTTTTCAATAGTACTTAAAACATTTAGGACACCTAAACACTGATTAGCAACAAAGCTTACTTTTTCCCCCTGGACAAGTCTATGCAATCCTAGTAATACTGATGCATCCCGAAAAGTAGGCTCATGCAGATAGTTGCAATTGCTAAAAAGACAAAAGCCCTTGAGGCACTATCTTATACTGTTAAGTATTCCTATGGTAAGTGTGTTATAACCAAAACATTCTCAACGGAACCTACACCATCATCTGAAACTTAACTCCAGCTCATCTTTCAGCAAGAAAATTTCTGACGTTAAAAATCTGACTTAAAATGGCTAAAACAAAAATCTAGGCAGTCAGAAAAATAAACAAACCTATACTTACCAGAAGAAACCTGTAACACCAATGAAACACTAAACTGATGTCAAGTTTTAGTTCTACAGTTTGACTCCTGATTCCTCACCTTAAGTGAGGGTCCTTTAGAAGATAAAGTGTTCTGTGCAAACCCAATAAAATTACAATTAGGGGATCTAATGTTATCACATAACTACAGTTAAGTTAGCAGTGTTGTGTAGTATTGACTGG EMBV3_30421 CATCATGAGCCCTTTGCTGTGTGGGTTAATGGTGGCCTTCTGTGGATTCTGGGGTACTAG Gene GeneID:532100|LOC532100:XM_002686520:702_cdna Constitutive 0 NULL GeneID:532100 3 GENE LOC532100 NULL similar to olfactory receptor 62 EMBV3_32606 GATTGATTATAACGGATCTTTCAGTATATAAGGCTTTAAGAAGCAGAGTTTTGTGCTCTT Gene GeneID:407159|HMGCR:NM_001105613:221_cdna Constitutive 2 NULL GeneID:407159 10 GENE HMGCR MGC166255 hmg-coa-r 3-hydroxy-3-methylglutaryl-coenzyme A reductase EMBV3_33417 TGGCGACACAAACTGGTCAATAATAGGTAATGCAGGTATGTTCAGGTTAAGCCAACGATG Gene GeneID:407190|CSNK1G3:NM_001105329:5_cdna UTR3_Alt 2 NULL GeneID:407190 7 GENE CSNK1G3 MGC127453 casein kinase 1, gamma 3 EMBV3_08625 TGATGAAAGTTATGGAAGCAAAAGGCCCAAGGTGGAGTTGTCCGAAGAGGAGCTGAAGGC Gene GeneID:510132|XRCC6:XM_002687947:30_cdna Constitutive 0 NULL GeneID:510132 5 GENE XRCC6 NULL X-ray repair complementing defective repair in Chinese hamster cells 6 EMBV3_00476 TTCATAAAGGACGAGGTCAGGACACTAGGGTTTATCATCTCTGGATCGCTCTCAGTGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02664 AGCTTCGAGCAAAGCGCTATAGAAGCTCTTAAAGGAGATAGAGGGGGTGGCCTCACAGAG Gene BVT0101_025264 + 0 NULL GK000025.2:26558808-26601437 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19370 TTCAGTTGCTTAGTCATGCCCGACTCTTTGCGATCCCATGAACTGCAGCATGCCGGGCTT Gene BVV0102_181174 - 1 EMBV3_22434 GK000018.2:62024020-62028037 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008634 TCONS_00162106 2 XLOC_004191 XLOC_098988 NonCoding TCONS_00008634 XLOC_004191 NonCoding NonCoding - 1:74809296-74810378 - TSS5711 1082 2 TCONS_00008634_3 57 0.77818853974122 1 0 0 0 4.27634099088413e-06 0 0 0 0 0.000191326224293397 0 0 0 9.91411331557087e-06 2.6518307128623e-06 6.08650010927295e-05 9.06873567271832e-05 6.10249153592739e-06 0 0 0 0 0 0 0 7.74704483105696e-05 0 2.17051532579454e-06 0 0 0 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 5e-176 621 86.84 0.463955637707948 0 noncoding GTAAACTCATCAGATAGCATATTAAAAAGCAGAGATATTACTTTGCCAAGAAATGTCCATCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATAGATGTGAGAGTTGGACTGTAAAGAAAGCTGAGTGCCGAAGAATTGATGCTTTTGAACTGTGGTGGAGGTTCTTGTGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTGCATCCTAAAGGATATCAGTCCTGGGTGTTCATTGGAAGGACTGATGCTGAGGCTGAAACTCCAATACTTTGGCCACCTCATGGGAAGAGTTGACTCATTGGAAAACACCCTGATGCTGGGAGGGATTGAGGGCAGGAGGAGAAGGGGACAACATAGCATGAGAAATCTAATCACTTACTAATCTAATCAGCAACTGGATGCACATGAGTGTGGGTGAACTCCAGGAGTTGGTGATGGACAGGGAGGCCCGGCATGCTGCAATTCATGGGGTCTCAAAGAGTCGGGCATGACTGAGCAACTGAACTGAGCTGAACTGAAACTCATCAGAGGAATGGTGGCGGTGGTTGTGGTGGTTTAGTCACCAAGTCGTTCATGTTTGACTCTTGCAACTCCATAGACTATCGCCCACCAGTCTGCTCTGTCAATGGGATTTCCTAGGCAAGAATATTGGAGTGGGTTGCCATTTTCTTCTCCAGGGGATCTTTCCCACCCAGGGATCAAAGCCAAGTCTCTTTCATTGCAGGCAGTCTGGTGCATTGAAGGTAGGTTCTTTACAGCTGAGCTGCCAAGGCTTCCCCATCAGGGGAATAGGGGGTAGTAATACAGTATTATTTATAGTTTAGCCCTGGTGGTCTGGTTTTCCACAGTGGTGTTCTTTAGGAAAATCAAATTAAGTACAATGTCTAAAATATAGGAATTTCTACAAAAAGGTCAAACTGAATACAATGCCTGATGAGATAGCCAACAATTTATCCATCCACCTGTTGATGGATATTTGGGTTGTTTCCAGTTTGGGGATATTACCAATAAAGCTTCTGTGAACATTCATGTACAAGTCTTCGTGTATGCTTTCTTTTTTCTTGGGTAAATAACTAG TCONS_00004044 . 5' 15630 TCONS_00004044 . 5' 15630 EMBV3_40189 ACTGTCATGCCAACACTGTATGTGTCAACCTGCCCGGATTATATCGCTGTGACTGTGTCC Gene GeneID:100336918|LOC100336918:XM_002699102:110_cdna Constitutive 0 NULL GeneID:100336918 29 GENE LOC100336918 NULL protein kinase C-binding protein NELL1-like EMBV3_13266 AGTATGATGAGAAGACAAACGAACTACTTGCCCATATTCGTGCGCAAAGACACCAAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25084 CTCATTCCCAGGAAAGGACTTAAGAGTCAAACATATCTCAGTGGCCTTGCGGTCTTCATT Gene GeneID:100336443|LOC100336443:XM_002686249:34_cdna Constitutive 0 NULL GeneID:100336443 3 GENE LOC100336443 NULL guanylate binding protein 4-like EMBV3_11570 ATACACCGAGACTGTGTCTTGACATTCTGAGACCTACGATGGACCCAGGTAAAGTTGCGA Gene GeneID:535674|RIMS2:NM_001102190:35_cdna UTR3_Alt 2 NULL GeneID:535674 14 GENE RIMS2 MGC159469 regulating synaptic membrane exocytosis 2 EMBV3_09747 GTCATTCTTGTGTGAAGCTGTCTAGGGCACCCAGGCTTCTGGTGTGGTCTGCGTTATGAT Gene GeneID:514108|EIF4ENIF1:XM_002694630:100_cdna Constitutive 0 NULL GeneID:514108 17 GENE EIF4ENIF1 NULL eukaryotic translation initiation factor 4E nuclear import factor 1 EMBV3_42918 CCCAACTTGCTGTATCAGAAGTTTGTGAAGTCTGACCGATGAGATGCTGCTCCAGGCCTG Variant GeneID:768314|GPATCH4:NM_001078129:251_cdna 503^594 1 EMBV3_05986 GeneID:768314 3 GENE GPATCH4 GPATC4 MGC128377 G patch domain containing 4 EMBV3_37028 AGCCTAGCATTCCTGGAGGTCCAGTCCGCCTTTGCCCAGGGAGAATCAGATACTTCAAGA Gene GeneID:280988|AHSG:NM_173984:27_cdna Constitutive 0 NULL GeneID:280988 1 GENE AHSG NULL alpha-2-HS-glycoprotein EMBV3_09824 TTCAGGCTTGGTGGCGTGGAATGATGGTACGCAAAGGACTTGGGAGATTTGAAGAACTGC Gene GeneID:784301|LRRIQ4:XM_002684942:117_cdna Constitutive 0 NULL GeneID:784301 1 GENE LRRIQ4 NULL leucine-rich repeats and IQ motif containing 4 EMBV3_07459 CCATGGGGGATTAGAATTTCCTCTGTCACACATTGATAACCAGCCAGTGCCTTCACAGAG Gene GeneID:538992|LOC538992:XR_084721:51_cdna Constitutive 0 NULL GeneID:538992 2 PSEUDO LOC538992 NULL similar to islet cell autoantigen 1,69kDa-like EMBV3_24415 ATTCCTGACTCCAGAAAGCTGGAAGTCCAAAGACCTGGGCTCAGGTTCAGCTCCTGCTAC Gene BVT0102_112498 + 0 NULL GK000026.2:44116975-44378155 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152466 TCONS_00152464 TCONS_00152465 1 XLOC_092346 NonCoding TCONS_00152466 XLOC_092346 NonCoding NonCoding - 26:44365369-44369414 - TSS113712 720 0.0944444444444444 3 0.822700296735905 0.000170070841267784 0 4.3286314652742e-06 1.10939239079646e-09 6.97308615774254e-10 0 4.85944796852903e-05 0 0 0 0 0 4.42368361429974e-10 0.000176141676551296 0 1.16674146408297e-11 0 0 0 0.000536210268157365 4.21439085030596e-06 0 1.02715567678607e-09 0 0.000981534711139379 0 3.17134712636491e-05 0 0 0 0 noncoding GAGGATGACTCTGGCACCTGGTCGCTGAGATCGCGACAGTCCTGCCCACCAACGAGATCGGACAGTCCTGCCCACCAGCGAGATCGGGCAGCCCTGGGTGTGCGAGTGCCAAGGGACAAGAGCGCGTCTGGGTCATCACGCCCCCTGCAAGCAGCCAGTCCAGGGCCCGTCTTTGACACCAGACCCCGCCCGTGGCCAGCCACTTTTCCAGAGGAAAGCACGGCCCCACAGGAGGCCCCACACCGCTCCATCACAGCTTTGAAGAGTCTCTGGGGAAGCTGACTTCTGTGTCTGTTCCGCCCACCCGCTTCCCAGTTTCGAATGAAGGATCAATGGGAGGATAGAATTGAAGAGAGAATCTGGAAGTAAATGTGACCTCCATAACTCTAAGATCTTACTCTCGAAACTACAGACTCTGGATTTCAGCGCTGGAAGACCGTGAGGGGCACCAGGCAGCTGACACTTGCTCAGGGACACGCACCGGGCTAGTAGCAGGAGCTGAACCTGAGCCCAGGTCTTTGGACTTCCAGCTTTCTGGAGTCGGGAATCAGAGCAGAGTGTCCTGGTTTTGTGTCTCCCTTTTACACCCAGACGCTCATGTACTACCTGACATCTCCCACTCAACATGATGAAACAGGAAAGAAATTGAATTTGTTTTCTATTGCCATGTGACAGATTACCAGATTTGTTAACAAATTTGGCAGATTAAAATGCATGCAT TCONS_00152467 TCONS_00152468 s 3' 12329 TCONS_00152467 TCONS_00152468 s 3' 8740 EMBV3_41262 GGTCCTTGGTGGGTTTGCTACATTCATTTCACTACAGTCACACCAGGAAGGCAGGAACTG Gene BVT0102_148582 + 1 EMBV3_42906 GK000005.2:76312956-76388589 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04046 GGGGAAAATACACCTTCCCGGGCACAGCCATAATATCCACCTCACTCGACTACTTGTCAG Gene GeneID:767996|LELP1:NM_001077056:248_cdna Constitutive 0 NULL GeneID:767996 3 GENE LELP1 MGC133634 late cornified envelope-like proline-rich 1 EMBV3_15183 TCATGCACAGGACGTCATCTCCGATCTGCTGTGTAATCGCATTGACATCTCGCAGCTGGT Gene GeneID:281990|POLD1:NM_174427:47_cdna Constitutive 0 NULL GeneID:281990 18 GENE POLD1 NULL polymerase (DNA directed), delta 1, catalytic subunit 125kDa EMBV3_23475 AAGTACACTGTTCATGCAGTTCAGATGAGGAGACTGAGCCATAGACCTTGGGTCTGAGCC Gene BVV0102_099327 - 1 EMBV3_39530 GK000016.2:50573369-50596016 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21470 GTGCCATATTGGAAATCTCCATCCACCACAACCAGTTTTTTCTCCAGTGTTGGAAGAGAC Gene GeneID:614112|SNX24:NM_001076311:29_cdna Constitutive 1 NULL GeneID:614112 7 GENE SNX24 MGC139539 sorting nexin 24 EMBV3_28377 GGTGTGGTTCCAGGTAAAAGAGATGAAGAGGACCAAGCCATACGAACTCCTAGGTATTTA Gene GeneID:525522|ZNF677:NM_001102092:2_cdna UTR3_Alt 2 NULL GeneID:525522 18 GENE ZNF677 MGC152083 zinc finger protein 677 EMBV3_43275 CCTCTGACGGGTACTGGGACCTGACATGATAAACAACATAGCCACGTGCTTTCTGCGTCT Gene BVV0102_318715 + 1 EMBV3_31093 GK000022.2:44880159-44902372 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25045 GCATGAAGTGTACTGGAAAAGATCAGACCTGGGCTTGGGATGAAAACCGCCACTCCCAAA Gene BVV0102_212046 + 0 NULL GK000018.2:60771052-60794962 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091555 TCONS_00091568 2 XLOC_056329 XLOC_056342 NonCoding TCONS_00091568 XLOC_056342 NonCoding NonCoding - 18:60690268-60691217 - TSS68914 949 2 TCONS_00091568_1 44 0.0453108535300316 1 0 7.16843779666474e-06 0 0 0 0 7.53857172570578e-06 0 0 8.31416214065053e-06 0.000218948501333182 0 0 1.20939088511871e-06 7.43518990091031e-06 0 0.000176262940030633 1.02051282329383e-05 0.00045828110272919 0 0.000147137588360301 3.19886848158846e-06 0.000793603483449116 4.02794708317078e-05 0.000611271252445815 6.38845791954308e-05 3.71205083957768e-06 1.13190533277345e-05 3.37378778748394e-06 2.55774851401267e-06 1.60496083379439e-05 XR_238509.1 LOC101907337 PREDICTED: Bos taurus uncharacterized LOC101907337 (LOC101907337), 2e-154 549 94.66 0.374077976817703 0 noncoding AGATTCTTGTAAACATTTTGGAAAATACAAAACTGTGAAGAGACTCTGTGATGTGAGCATGGAGTGTACTGGAAAAGATCAGACCTGGGCTTGGGATGAAAACCGCCATTCCCCAAACCCAGCATCTCTGCTAAACACACATTAAATATAGTGTTCATTTTCCAAAGCAGAAAGAAGGTAAGAAGACAGGAAGTTACTTCGTTAATTGTGATAGTTTAGGCACATCCGTCATTTTTCTTTTCATGACACTTGTTCAAGTCAAGTGGAAAAAAACAAATTCACAGCATGGGAATCTCACAGAAACACTTAAACCAGTGAACATGAGTCATGGCGTAGAAGTACAGGGAGGTGGTAAAAAGACTGTGTCTGTGATTTGAGCCTGGAGTGCTCTGGAAACATCACACCTGGGCTTGAGTGATCAATTCCCCTACCCCGAAAACCCACTATCTATAATCAACACAATGACTGTTCATTCTCAGAAGCAAAGAGAAACCAAGAAGATGGGGAGTTTCTCCATTAACTATGAGCATTTCCACACATTCCTTATTCCTTTTTTCCACAACCTTGTTTAAAGAGAGAGAGAGAAGTATGAACTTCATAGTCTCATGATGTCAGAGTGACGTCTCCAGAACAAGTGGACATCAGATGTCACGGTGTAAATGAATCACATGAAAGATGCACAATCACTGCCTGGGCATTCTGGAATTAACAATGAAATTATAACTTGAATCTAACATTTAAAACTGTCAATTTTATGCAAATTTCATTTCACATATACTTCCCCTGTTTAGTATCCTAATGCATTTAAGTAGTAAGACTCAGCAATGCAAAGGACAGCATCTCCTAGTTTTCTTTTTATTTCTGAAAATTTTCTGAAAAACTCTAGACCTCTGAGTTGAGTCACCGGGCTTCCCAGCTGGCTCAGTGGTAAAGAATCTGCCTGCCAATG TCONS_00087420 . 3' 4435 TCONS_00087420 . 3' 5383 EMBV3_27244 TCTCCAAAGCTAGATACACTGTCAGGTCCTTCGGCATCAGGAGAAACGAAAAGATCGCCG Gene GeneID:512745|RPL11:NM_001075581:149_cdna Constitutive 1 NULL GeneID:512745 2 GENE RPL11 MGC127967 ribosomal protein L11 EMBV3_41373 TCGTCCACGGGGGATGGCATTTCTGATTCGATATGGACCCCTTCCGGCAAGCCCACTTAA Gene GeneID:281884|KCNQ3:NM_174374:5_cdna Constitutive 0 NULL GeneID:281884 14 GENE KCNQ3 NULL potassium voltage-gated channel, KQT-like subfamily, member 3 EMBV3_08745 TGTGGTACACCCGGGACCGCCTGGTGCCAGCGCGTGTTCCCGTACATCTCCGTGATGGTG Variant GeneID:790870|LMAN2:NM_001101309:52_cdna 449^528 2 EMBV3_01757 GeneID:790870 7 GENE LMAN2 NULL lectin, mannose-binding 2 EMBV3_18952 AGGAGCCTAATATTGTCAACGTAGTTTTTGAAGATCGGTCAATATAGCTATCTTCTTCTC Gene BVT0102_383286 + 0 NULL GK000002.2:121830132-121847034 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106463 TCONS_00106462 1 XLOC_062806 Coding TCONS_00106462 XLOC_062806 Coding Coding ZBTB8A 2:121846042-121879702 j TSS78357 2675 1 TCONS_00106462_2 441 4 0.920645295463323 0.000116975506353474 1.50195996858001e-05 0 0 0 5.3468922001062e-06 1.42767737810452e-05 2.14144384941521e-05 0 1.03534479992379e-09 2.4165109944513e-06 4.05844383628356e-05 1.40279625925341e-05 3.35149728316544e-10 1.86791931798854e-05 0.000453383174328161 1.10349219163841e-08 0.000281379719511749 1.22035712958364e-10 8.8585182723542e-06 1.47514246877103e-05 0.000340714728840969 0.000174902011390863 0.000412836159250535 3.51243226121355e-11 2.54055570543655e-13 3.5895349857067e-05 3.73986665256653e-09 5.39645508102718e-05 0.000112374950537415 NM_001076264.2 ZBTB8A Bos taurus zinc finger and BTB domain containing 8A (ZBTB8A), mRNA. 0.0 2975 99.94 0.617196261682243 NM_001040441.1 ZBTB8A Homo sapiens zinc finger and BTB domain containing 8A (ZBTB8A), 0.0 2459 85.75 0.781682242990654 TCONS_00106462_2 sp|Q0VCJ6|ZBT8A_BOVIN ZBT8A_BOVIN Zinc finger and BTB domain-containing protein 8A; 0.0 917 99.77 0.997732426303855 5 coding 0 0 0 0 0.0410696635028243 0.744825068417145 -0.0149559763868288 0.785240591329893 ATTAATCTCTCTCTATCTGAAACAGAAAAATCAGAATGGAGATCTCCTCTCATCAGTCTCACCTCCTGCAGCAACTGAATGAGCAGCGCAGGCAGGATGTATTTTGTGACTGCAGTATTCTGGTTGAAGGGAAGGTCTTCAAAGCCCATCGAAATGTCTTATTTGCTAGTAGCGGCTACTTTAAAATGCTTCTTTCTCAGAACTCCAAGGAGACAAGTCAGCCAACCACAGCGACATTTCAGGCCTTCTCTCCTGACACTTTTACAGTTATCCTGGACTTTGTCTATTCCGGCAAGCTCTCTCTCACGGGTCAGAATGTCATAGAAGTGATGTCAGCTGCTAGCTTCCTTCAGATGACTGATGTCATCAGTGTATGTAAGACCTTTATTAAATCTTCGTTAGACATTAGTGAGAAAGAAAAGGATCGCTATTTCAGCCTCTCTGATAAAGATGCCAATTCTAATGGAATAGAACGCTCCTCTTTTTATAGCAGTGGCTGGCAAGATGAAAGCAGTTCTCCTCGTTCTCACCTAAGCCCAGATCAAGGAACAGGTATAATAAGTGGGAAATCTTGGAGTAAGTATAATTACCATCCAGCCTCCCAAAGGAATACTCAACAGCCTCTGACCAAGCATGAACAAAGGAAAGATTCCATTAAAAAGGCCAAACATTTGAGGTTGTCACAGCCTTCTGAAATGACTCATTATAAGTCAAGCAAGCGAGAAGCACGGACATCTGATTCTTCCAGCCACGCTTCCCAGTCTGAAGAACAGGCACAGATGAATGCGGAAATGGACTCTACTCCTGTTAGCTATCAGTATGGTCAAGGATCTGATGTCACGTCAAGAAGTTTTCCAGATGACCTGCCCAGGATGAGGTTCAAGTGCCCGTACTGCACACACGTGGTGAAGCGGAAGGCAGACCTCAAGCGCCACCTTCGTTGTCACACTGGAGAAAGACCCTACCCCTGTCAAGCTTGCGGGAAAAGATTTAGTCGGCTCGACCATCTAAGTAGCCATTTTCGAACAATTCACCAGGCATGCAAGCTTATCTGCAGAAAATGCAAGCGCCATGTGACTGACCTAACAGGTCAAGTGGTACAGGAAGGAACCAGGCGCTACAGACTCTGTAATGAGTGCCTCGCCGAAGTTGGCATAGACAGCCTCCCCATTGATCTGGAAGCTGAACAGCATCTTATGTCCCCATCAGATGGAGATAAGGATTCCAGATGGCACATGGGGGAAGATGAGAACAGATCGTACGTGGAGATAGTCGAGGATGGGTCTGCCGATCTGGTCATACAACAGGTGGATGATAGTGAAGAAGAAGAAGAAAAGGAAATAAAGCCCAACATCAGGTAGCTGGAGTGTGAACCAACAGAGCCTGTAGCTTACACTGACGTTCTTGTGTGACTCTCTTTCCACGCCCAGAGTCTAATCAACAAATTATCAGATCAGCTTAAAAGTAATGACCTGACACCACTTGCATGCTTTCTGAACAGGCCATTGTATCCATTCTGAACTTTACCGCCCTAAAATCTGTTGCTGCACTAGAAAGAAAGACCTAGCTTGAGTTGACACGCTGGATGAACAATTAATCCTCTTACTTTTATTGTGTTACAGAAATACCTTTTTTAAAAAAATATTGAAAAATCTACTTAGGGAACTTTTTTCAAAGAAAATATTTTCAATAAATTCACGACAACCAAACTTTATATAAAATAATTTCAAAGTGTTTCAAAAACATGTAAACTACCACTATTGAATTTTCACAGGGAACTAGGTCAGAGCACATTTAAGGGTCTGGAAACCTACCTGACTTAACTAACTAGACTTTCCATTAACTTTGGATCTAAAATGACCCATCATAATTCCAATATCCTAAGTGTTTTAGGATTATGGCAGAAGGCAAGTCTAAATGTTTGAAGTTGTTCATATTTGAAATTTTTGTCATTAAATTAGAAGTTACTCTTATGTAGTCAGTATTTAAAAAAAAAAAAAAAAAAGATGAAGAAGCTGACCAGAAATTATATATAGACATCATTTTCTTAAAGCAGGAACCTAATATTGTCAACGTAGTTTTTGAAGATCGGTCAATATAGCTATCTTCTTCTCTAAAGAAAAAAAAGAAAACAAAAACTGGAGGTTCTTACCAGTTCTTAAGAGTAATTTCCTACATTTATATACTGCTTTATTATTTATAAAGTGCTCTTTCTTGCATTTCCCCACCTAATCAGCAAGGTAGATAGCACTGTCTCCAATGTACAAATAAGGAAATTAAGGTCAGAAAGTGTAAGTGGTGGGACCAGAGATTGGACAGGTTTTGATTTTAAATAGTCCTCTTTCATCTGTCTCTCCTTGAATTGTCAAACCTCACCAATCTGCAATAATTATAAAAGAAGCCTATGAGAATGAGAACGTATGAAAGAAGAGGAATTTAATCATCTTCGACAATGTATAATACCTTGCACTAGAGCTATTCAAGAAGTGTCAAGCAATGTCCCTACAGTATCTATTGACATGTTTTTATGTTATTTATATGTAAAATTTATATATAAAACTATTTGAACAAGTTATTCTCCTAAGTTCTTTAAGCATCTTTGCTTGTTTATGTAATTTTTCAAAACAAACTTTTCTACCAGGATACAAAATGAAGTTTTAACACCTCCCCATATG EMBV3_17660 CCAGTGGTCCTTTCTTGGAGTTGAGAGCTGGAAGAATTTCCCCAGGCAGTAGAGTCAGAT Gene BVT0102_056588 + 0 NULL GK000029.2:47572426-47591666 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165654 TCONS_00165655 1 XLOC_100585 Coding TCONS_00165654 XLOC_100585 Coding Coding FGF19 29:47589915-47598489 j TSS123699 2853 1 TCONS_00165654_2 218 0.087627059235892 6 0.667910883004782 0.000540923181451479 0.00214844962397809 0.000999030009488467 0.00025593091296643 0.00156573308763335 0.000639310483241943 0.000500605273869044 2.87074621396471e-09 0.000775977136673351 1.34691988613527e-05 9.82023340282819e-06 1.81416688770976e-09 1.33179131138637e-09 8.23308482328649e-05 6.23236133487318e-05 1.25396033893625e-08 7.32779862448799e-09 0 3.3948079408786e-09 0.00409353210089997 0.000425383542265094 1.82070012517472e-05 3.12725941501802e-09 0 0.00123238256106598 0.000912174705275227 0.000647825745422613 4.88559361800563e-09 2.37019669564626e-09 0.000130528694573939 XM_599739.4 FGF19 PREDICTED: Bos taurus fibroblast growth factor 19 (FGF19), mRNA. 0.0 4341 100.00 0.843322818086225 NM_005117.2 FGF19 Homo sapiens fibroblast growth factor 19 (FGF19), mRNA. 0.0 845 73.92 0.478443743427971 TCONS_00165654_2 sp|O95750|FGF19_HUMAN FGF19_HUMAN Fibroblast growth factor 19; 8e-113 326 75.00 0.963302752293578 1 coding 0 0 0 0 -0.133266042877094 0.401866463648929 -0.0300698735653616 0.688441423670211 TGGCCCATAAAGCTTTCGAGATGATGTCTTTTTTTGTAACGACTTTCCTGGTGACATTTTCTGCGCGCTCCGTCATTAACGCCAGTCACCGGCTGGGGTAAGGTGCTCCCCTGTTCCTGCCCGCCGCGCGCCCCGCGAACTGCACGCCCAGCCCCTGGAGAAGCTCTCAGGGACCCAAGGACAGCACCGACGACGAAAGACACAGCAAAAACAGAGGAGCCTCCCTGCGCTACGCGCCCTGGAAAGGACCGCCGCGGGCCGGGCCCGGCCGATACCCGGGCTGAAGCGCCATCTAGCGCTCGCCCGCGCGACCCTATTGTTCCTCCGAGAGCCCAGGTCGCGCCTGGCCCCAAGCCGGGGGACAAAGGCCTCGGGGCCGCCGCCCAGCCTCCCGCACCCTCACCGCCAGATCTGCGCGCAGAGCTCCGAGCCCGAGGGAGGTGCCATGCGGAGCGCTCCGAGCCGGTGCGCCGTGGCCCGCGCCCTGGTCCTGGCTGGCCTCTGGCTGGCCGCAGCCGGGCGCCCCCTGGCCTTCTCGGATGCGGGGCCGCACGTGCACTACGGCTGGGGCGAGTCGGTTCGCTTGCGGCACCTGTATACCGCGGGCCCGCAGGGCCTCTACAGCTGCTTTCTGCGCATCCACTCCGACGGCGCCGTGGACTGCGCGCAGGTCCAGAGCGCGCACAGTTTGATGGAGATCAGGGCGGTCGCTCTGAGCACCGTAGCCATCAAGGGCGAGCGCAGCGTGCTGTACCTCTGCATGGACGCCGACGGCAAGATGCAAGGACTGACCCAGTACTCAGCCGAGGACTGTGCTTTCGAGGAGGAGATCCGTCCTGACGGCTACAACGTGTACTGGTCCAGGAAGCACCATCTCCCGGTCTCCCTGAGCAGCTCCAGGCAGAGGCAGCTGTTCAAAAGCAGGGGCTTCCTGCCGCTGTCTCACTTCCTGCCCATGCTGTCCACCATCCCAGCCGAACCTGAAGACCTCCAGGAACCCCTGAAGCCTGATTTCTTTCTGCCCCTGAAAACAGATAGCATGGACCCTTTCGGGCTCGCCACCAAACTGGGATCGGTGAAGAGTCCCAGCTTCTATAATTAATGGAGGCTCTGTCCTCTCCCCTCCACCCTGGCCCTGGAGACCAGGACCCCAGGCCTGAGGTGCTTGCGGAGTGGGTTTTCTACTCCTGTATGATCCTGAGTCCAGGTTCTATGTAGCTTTAGGAGGAAATATTTAGAACTTGTACATAGACAAAGTTTTACATGGGCTGTGCCGGTTTCTAGCGGATAGACTTGTACGATCATAAAATGGTAAGCCTTCCACCCCACCCACCCAGCTTCTACCTACCCCAGCCCCTCAACCCTGCTGGACGAGTGTGTGCTGCCCTGGTTCTGCCTGAGTACCTCCACTGGCGGAGAGCTCACTGCCTCCGGCAAGGTTCTTATGCCAGGCTGAACTTCTCAGCAGTTCTCTCCTCCTATTCTTTTGCAGCACGCGTGGCCAGAGGAAAAGCAGTTATTTTTTTAAAACTCATGGGCAGGTAATCAATTTTGTGAAACCTCAGGTAAATCTGACTCTACTGCCTGGGGAAATTCTTCCAGCTCTCAACTCCAAGAAAGGACCACTGGGCCTCCCCAAGCTCCTCCAGCACAGAAGTAACCACTTGCAGGCACCACCAAGCTCCAAGAGCAGGGGGAGCCCAGAGGCCCCTCCAGCCGGGGTCAATCTTGAGAACTCCCTGTTATGGCTGGCTCTGGGTTGGACAGCCTCATGGGACCCCTTGGCAACCCACCCGGGGCAGATAAGGCGGCCTATCCATCCCTCCTCTTCCCCCCCTTCACCATTGCTCTGCACGTGGTCAACACTTACCCGGGGTCATGCTGGTCCCCTAAGGTGAATGGCCGCACTGCCGCCTGCTCAGAGGCGTGGCCAGTCCCGGCAGCATCTTCCTTGCCATGGTGGCCGGGGTTTCCAGGCAATCGATCTCGGGTTGTCACTTGAGGGCCCTTAGAGAAGGAACCCTACAGGCTTCCTCCCCGCAGTTCACTCACCTCACTCCGGGGTCTGACCCCCACCTCCTTTCTACCCGCTGGGATGTTGACCTGAAAAGGTCAGAGCAAGTCCTCCGCCTGGGGTCCTGACCCTTTCATTCCAAAGCCCCGAAAAAGAAGATCTGAAAACCCCGAATCTCACCAGTAACTTGTCAAAGCCGCATGGAGATCGAGTCCGTTTTCCAGCACTTGGTTTCCACTGTGATATTTATGAGTAATTTATTGTGTTTGATATGTACATCTCTTTATTTTCTTACTTTATTTATACCCCCAAATGGTATTTATGTATGTACACGAGTTTTGTTTTTTTGTTTTTTTTCTACATTAAAGGGGAATTTGTATCAAAAATTATCTGGAATATTTGTGCAGGAGGAGAGGGGAGGGAAGGAGCCTGTGTCCGCTGTGTCTGAGACTTGGATCACTGGGGCCACGTGATTCTCTGTTGGGGGCACATGTTCCTGAATGTTCTAGGATGATGAACAGTGTCCCCAGCCGCTACTGACAATGCACCAGTAACACCCCCTCACCCCAGTCATGGTAATCAAAAATGTCCAGAAGTCGCTACCTTTCTCTGGGGGACAAAAGCGCCCTCTCATTTGACTGAGAACCTCTGGCCTAAACGTACAGGGTTTCTCGTGCCCAGTAACAAAGCAAGTGGCAATGCTGGGTCACGGGCCCAGTGACACCCAGGCTGTTCTGTGACTCTCGTGGCATTTCCATGGTGTGGCTTTGTGGTCTCAGCGTGGGTACTGAGCCTTCAGTAGAAACATCTGTCTTCTCAAGCCAGGGACATGGACTCGC EMBV3_12819 CCCACATATTATTTATTCACTTCTTTCCTCAACCCGTGAGACCTGGAACCCCAAGTGCGC Gene BVT0102_078530 + 0 NULL GK000011.2:2725965-2731006 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023753 TCONS_00023761 TCONS_00023757 TCONS_00023759 TCONS_00023758 TCONS_00023755 1 XLOC_014355 Coding TCONS_00023755 XLOC_014355 Coding Coding CNNM4 11:2690656-2730825 = TSS17599 7213 1 TCONS_00023755_4 630 0.0456120892832386 7 0.82060346544513 0.000228052425982714 0.0010746242383095 0.00139970302000322 1.07510453613839e-05 0.000339415220533662 3.3706415818926e-05 5.69201714932664e-10 0.000460733896406811 0.000157265656950555 3.60850753296744e-74 3.88771568776659e-05 7.03976743434994e-08 0.000144206110408437 0.000559873357756737 3.72164936118797e-69 0.00096561289403068 1.67611732163746e-106 0.000172444595008941 0.000916426718539193 0.000221368664658018 1.79172428265336e-46 4.20750432791387e-24 4.70448759992672e-05 0.000570992500575339 0.0019171431725861 0.000885256217055443 0.00110623761944705 6.68644806177666e-05 4.53330009062806e-05 6.86135746595187e-05 NM_001205896.1 CNNM4 Bos taurus cyclin M4 (CNNM4), mRNA. 0.0 4239 100.00 0.325661999168169 NM_020184.3 CNNM4 Homo sapiens cyclin M4 (CNNM4), mRNA. 0.0 3662 79.35 0.592541244974352 TCONS_00023755_4 sp|Q6P4Q7|CNNM4_HUMAN CNNM4_HUMAN Metal transporter CNNM4; 0.0 1189 91.92 0.998412698412698 2 coding 0 0 1 1 0.141919553763089 0.428661321317841 -0.00494301916334078 0.913058613558599 NNCCGGAGGAGTGAGAACATGAAACTCTATGCGCTGTGCACCCGGGCGGGCGTGGACGGGCCCTGGCAGAGGTGGACGGACAAGGATTCGCTGCTCCTCATGAAGGAGGAGGCTGGGAGGCTCCTGCCCCTCTGGCTGCACGTCCTCATCATTATGGTGCTGCTGGTGCTGTCAGGCATATTTTCTGGCCTCAATCTGGGGCTGATGGCCCTGGACCCCATGGAGCTGCGCATCGTGCAGAACTGTGGCACTCAGAAGGAGCGGCGCTATGCCCGCAAGATCGAGCCCATCCGTCGCAAGGGCAACTACTTGCTCTGCTCCCTGCTGCTGGGGAATGTGCTGGTCAACACCTCCCTCACCATCCTTCTAGACAACCTCATCGGGTCCGGCCTGGTGGCCGTGGCCTCCTCCACCATTGGCATTGTCATCTTCGGGGAGATCGTGCCTCAGGCCCTGTGCTCCCGGCACGGGCTGGCCGTGGGTGCCAACACGATCATCCTCACCAAATTCTTTATGCTGATCACCTTCCCCCTCAGTTACCCCATCAGCAAGCTCCTGGACTTCTTCCTGGGTCAGGAGATCCGCACCGTTTACAATCGGGAGAAGCTGATGGAGATGTTGAAGGTGACCGAGCCGTACAATGACCTCGTGAAAGAGGAGCTGAACATGATCCAGGGGGCCCTGGAACTGCGGACCAAGACGGTGGAGGATATCATGACCCAGCTGCAGGACTGCTTCATGATCCGCAGCGATGCCATCCTGGACTTCAACACCATGTCAGAGATTATGGAGAGCGGCTACACCCGCATCCCAGTGTTTGAAGACGAGCAGTCCAACATCGTCGATATCCTCTATGTCAAGGACTTGGCCTTCGTGGATCCCGATGACTGCACCCCGCTCAAGACCATCACCCGCTTCTACAACCACCCAGTGCACTTCGTCTTCCACGACACCAAGCTGGATGCCATGCTGGAGGAGTTCAAGAAGGGGAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGGGGGAAGGTGACCCCTTCTACGAGGTGCTGGGCCTGGTCACCCTGGAGGACGTCATCGAGGAGATCATCAAGTCCGAGATCCTGGACGAGTCTGACATGTACACTGACAACCGAAGCCGGAAACGGGTCTCTGAGAAGAACAAGCGCGACTTCTCAGCCTTCAAAGATGCTGACAATGAACTCAAGGTGAAAATTTCACCTCAGCTACTTCTGGCTGCTCATCGCTTCCTGTCCACAGAGGTCCCCCAGTTCAGCCCCTCTCTGGTATCAGAGAAGATCCTGCTGCGGCTGCTCAAGTACCCAGACGTCATCCAGGAGCTCAAGTTTGACGAGCACAACAAGTACTACATCCGTCATTACCTGTACACTCGAAACAAGCCGGCCGACTACTTCATCCTCATCTTGCAGGGGAAGGTGGAGGTAGAGGCCGGGAAGGAGAACATGAAGTTTGAGACGGGTGCCTTCTCCTACTATGGGACCATGGCCCTGTCCTCGGCCCCTGACCGCTCCCCATCGCACCCCACGGCCCTCAGCCGCTCGGCCTCCCTCAGCTACCCAGACCGCTCAGAGACGGCGAGCACCGTGCCCTTGGCAGGCAGCAGCAACCAGTTTGGCAGCTCGATCCTGGGCCAGTACATCTCTGACTTCAGCGTGCGGGCACTCATGGACCTCCAGTACATTAAGATCACCCGGCAACAGTACCAGAACGGGCTACTGGCCTCACGCATGGAGAACTGCCCCCAGTTCCCCCTGGACGGGTGTGCCATCTGCACCGAGAACTCAGCTGACAAGGCCGAGGCGCCGCCGGTGGACGAGACCACGAACCTGCTGAATGAGCGCAACTCCTTGCTGCACAGAACGTCTCACGAGAGCGCCATCTGACAGGAGGGCCCGGGGTCCCCCGCCAGCCCCGCGGGGGCCTCCCCAGTGGGCCCACAAGAAGACAGGGAGCCTGTTAGGCAGGAAGGGGTACAGTTACCCTGTCTGACTGAGCAGCCAGAGGGTCCCCTGCCTGAGGGGGATCTGGTCTCTGACAGGGACCTCTGAACAGCTTGGAGGTGGCAGCTGCACAGCCCTGGACTGCAGGGCAGTATACCGACGACCAGGAGCGCTTCTAAATTCAGCTCATTGCACCTCTTTTTAAATATCATAGGGGGAAGGGAAGACAGGGTTAAGGAACTTTATTTAAAAGCAATTTTTTTTCCCACAAAAACTTTAAAAGGGGTAGGGTTTCTCACCCCGGGAAGCAATAGCCATAATGTGCTCCCAGTTGTGACCTCCTGGCTGCATCCCTGACTCAGGGAGCCACTTCTCCCTGCTCCTCTTCCACGCCCTCCAGAGATGGCACCGCCGTGGCCTCCTGGAGGAAGATTTCTTCTTGGGAGAGAAGACAGTTCTTCCCAGGAAGCAAAGAACCAAATAGCGCTGAGAACAACTGCCTGGACGCATGCTGAGGCTCACCTGTCGTCACCGAGGCCAAGGGATTTTTCTGGGAACCGTGGTCAGGGAGGTGATACTCCAACTGTGGAGAGGAGCACGCCGCCTCCTCTTAATCGCTGGACCCAGGAACCTCCTAGAACTCTGCTGATGGGGTCTCCTGGTGAGTTGGGCTGGGCCGAGGACTCTCAGCCCTGTCCCTGCGATCTGCCTCACATCCACCCCTTTGGACAGCTCTCCCCTTGTCGTGGGGCTGACTCCAAGTGTTAGGGCAGGGTCTCACACCTTTAAGACTGCTAATCAGACTGCTCCCCAGGCCCTGCCCTCAGTTTCACCAAAGGTTTTCCCCAGGTGGGGAGAGTGTCTGTGTTAGAGGGGCTTACCTGTGATGCTCTTTTCGGGGCCAGGAGGGAACTTGGTCATGAGCATCTACATTGTTAGCAATCAGTTTATCCCCCTCCCACCCCATAGCCAAAGTCAAGTCTCGTTACTGACCTACAAAGCCCTTCTTTTCAGACTCCCTGCTTCTAATTCCAAACCCCAGTGTCTCTTGGGGATTGAGGTCAGGAGGATGTGTAGGAAGCCAACCCAAGTGGGTTCTTCATGGCCTTTCCTCTGTGGCTGAGGCTCACCTGACCTTGTTCACGCACTTACAGAACCCGGGAAAGGAGGTTTCCACCTAGAAGGCACCCAGCCAGCAGCCCCGTCCTACACACGTGTGAGATCCTAGTGTGAGCTGTCATCCCAGTCTTTGCTGAAGCCTGTGGTACTGCACCCTGAGTGCCCCAGCCCCATCTGCAGTCCTGCACCATCTCCCTGAGCAGTAGGCTTCCCACTGACGGGGAGGCTGTGGGACCAAAGTCCACTTTGACCCTTTGGTTGGGTGGAACACTTGCTGGGGGGCCTGGAACAGACGAGGGAGCCTCGACAGGTCTTCCCACATATTATTTATTCACTTCTTTCCTCAACCCGTGAGACCTGGAACCCCAAGTGCGCTGTTGGCAATGACCAGAAAATGCCTCGCACCAAGTATACTGGTCAGCTTAACAGACCTTCCCAGTGACAGAAGTGATTCCTACAAGTCTGGAGAGAAGGTGGTGACACCTATGGGTTCTCAGCCATAAGGAAGACACCAGACCTTCGTGCCCTGTTCAGGGAAACCCCTTAGTTTTCTCCAGGAGCAGCTTGCTCTTCGCGTCCACATGGGGGCTTGCAGTGCGGTTTTCCTGGGGCCTGAGTGCTGCCTGAGCCCACCCACTGCCCGAACCTAGTGTTTGTGTGTGAAGTCCATGGAGCAGGTACACACACTTCCACGGCTACCTCTGTGCACACACAGATGCTCTCAAGAGACGGTCCTTCCTCCCCACCTCTCCCTGTCCCCATTTATAATCACTTTCAGCAGAGCGTCATGGTTATTTCCAAATATTACTGGTCCGATGACTTCCTCTTCCCAGTGCAATTTCTCATTTCCTATTCCAGCCTCTGGTTCCTGGGCTGAGCTGTACCCTGGACCTGGCCCAGCCTTGCGTGTCTTCCCATGGAAGGGGGACCTCCGCAAACAGCAGGCCTCCATGTGGGTAGGCGAGTCACAGCCACCGTAGCAAATAACTCGTATTTATTTTGCATAAGATTTTAATTTGTATATTTTTGTGATTTATTTTGGCATTGTTATGAGTTTTGACTCTCGGGGAGTTTTGTTGTTATGACTCTTGTGTCTTTTGTCACAAAACAATGATAATATTTGCTAAACGATATATGGAATTTATTTTTGATTGGTAATAAAAAAATGAAATATGGATAAATCTTGGTGAGCCTGCAGTTGGCCTGTCTGAGCTCCGGACTTGTCGCAGAGCTCGAAGTGGCTGTGCTTGGCTATGACAGGGCAAGAGTTAAGCATCCTGGGATTGTTTAGCACTAAAATTAATGAAACGGACATGTAACATACAAAACATAATCAAGGCTGTTGTCACAGGAGCTAGAGAGTGCCAGCTGCTGCTAGACCGGTACGGCAAGTGTGCTCAACTGCCACCGTTACGAATCCAGTAAAATGGAAACCAGAGGACCAAGGACAGCTGGAATGGACAAACTGCCCCTCCTCTCTCCTCTAGGGGCTAAAGGAGAAAGGTGCTTCATTTAAACTATGATCGCATCGTCTAAGAACAGCAGTTGCCTCTCGGTCCAGACTTGGAGGCTGGTTGTGGTCTCCAAGTTGGAGTGCCCACCCCCGGAGAGCCCACCTAGAAGGGACCTCCCTGCATCCACTCTGGAGGCTTCAATCGGGAAGACGCCCACAGTGCCCCCCAGGTGCCTAGCCGGTGGGTAACCGAGTGCACCCAGGCCAGGGGCTCAAGGAACCCTGCTTTAGAGGGGAACTGGGGGGAACGTTAGGCATTGGGTAGGCAGAAAGGAAAGAGAACATTTCAGATAAAAGGAATAACAAAGGCAGAGTCCTGTGTATAGGTGGGCAAGAATAAATTTCTTTCATCCATCTGCCCCACACACATTTCAGCCTCTGCTACATGCCACATGCCACCAACCCTTCAGGCTATCTTCTCCACCTGGAACATTCTCCCAGATCTGTGTGAGGCTCACCCCTTGCTTCATCTAAGCCTCTGTTCAAATGCTACCTCCTTGAAGAAGCCTTCCCCCATCAGACCACTCAAAAGAGTTTGGCCCCCATCCGTTTCCTCATCTTGCCTTGTTTTTTTCTCTGTAGAACTTAACTGCCAGGTATTAAAATAAGGATTTGTGTATTTTTTGTTGTCCTCACACTAGAGCTTAAGCTCCAACAGGTCAGGGTATTTGTTATTTCAACTGGCAGTCCCAGTGCACTGCAGGCACCGGATGCAGGAAATACTTGTTGAATGAATGAATGAATGGGCCTTACCAGAAGGTAAGCACCGGATTTTATTGGAGGGGAGCATGCTACTCCTATAACCTTGACTGAACCTAGTAAAGATGGTCGAGGAAAATTGGCTGGAGGAAGTGACGAATATAGACTTGAGAGAGGAGGAGGAGTCAGTCAGGGGTCACACACGATAGTTTTGGGTTTAAAACTCAAGAATGAATATTTCGATAAAACATGGAAATGTCTTGAGCTGAATGGCCAGAAAGGAAAATCACCCATGGGGGACCTGAAAGTCTGGTGACAAGTGTCTCCACCGATGCTGTGATAATGGACCAAAGAATGGTGCAGAGCCAAGGAAGACAGAAGCTGGTAAAGTGGTGTGGGACCTGTGCTGTTCATAGAAAGTCATTCATGGGCAACTTTGTTTGCCCTGTGCTGGATCCTTTGGGTCTCATGGTTTAAATCATCATTTGTGTTTTCCAAGTGTGATCTGATTGTTCTATCCAAAGGTTTCCCTGCCAAAATAAGTTACAAGGTTGTTTTCCAAGGGAGTCTGAGACCAGAGGAAAAGTAACTTGTCAGAGGTCAGAGCCCTGTGTAGATGTACTGGGCGTTTTTCCCACCTTGCCTCTGGAACTGTTCTTTGCTGGTTAACTTTTCAGGCATGTGGCTCATTTCAAGCTGTTGTCCATTCTATCTGTGTCAGCATTTTTATCTGGACTTAGAGACAGAAGTGTGAACCAAAGGGACTGAATCTATTATTATTTTTTCAAAAGAGGCATGCCAGTCTGGTGGAAAGGGTCAAAGGTCATAATTGCTTCTGCTGGCAGCTTATTCTGGAATTTTTCAGACAATACTTATGTTGGTCACTCACCACAGGTTTACTCATTTTTGTATATTACCTTCCACACAAGTATATTTCACTTAATTGTGACCGCAGTGCCTAAGCTTTTTAATAGTATTTTCATGACAACATATGTGTTTCTATACAGTCCTTGCAAAGACCATTTTAAATGACACGCATATGGATGGTCTTATCAGTCTATTTATGTTAGGAAAGTTGAAAATACATAAAAATGTAGAAAATACAAAAAAAATCATTTTGTCGGGACATTTATAGAGAAGTCTTGTTAGCTTGTCTATTTCCTTCCAACCAGGCAAAGTTCACATATAACAGGTTGAGGAACATTCCATAATGTCAAGCACCATACAGTCTTCTAAAACAACAATCCGGGGAGGATCCTCTTGAATAGTTCCTGTTGGTCGTTAGGAATTATTTTCCCAAGGATGCTCTGCTAGAAGTGAAGTGACCAGATACAGTAATTCCTGACAGAGATGCCAACTCCTAGTGTGGCTGGGATGGCAACAGGGTATTAGGCTGATCGCTTTGGAACCCATCATCCGTGCCCGAGTAGTGTTCACTTTTCTCTGGTAAAGTGTATTAATAACGAAGTAGCTGCGAGGATCCAATGAGGCAGTGATTTCGTGTGTTTAGGTACTTCGTTCTCTCTGGCAGGGGTGCAAGTTCATCTAAGGAGGGACCGAGTGTGTGTCACGTCCCAGACCCATAGCAGAGTCGCGCGCGATCAAGGAATACTTTTAATAAGCTTTAGCTTCCGACGCCCGGTCGTCGGTTCTTTTAGCCCTCTTCGAGATTTGGGTCGTTGGTGTCTGGGAAAACGGACCATCTCCCTTCGTTAAATTCTCTATCTGCAATTTCAGGAGCGCCACTCCTCTCGGCGGCCCAATTCCCGAGCCAGGGACTTCCCAGAGTACGGGCCTGGCCTCCCGGCGCTGGGGACGGCCGAAGGGAACTAGATCCCCGCGGAGAGCGGGCCAGCTCGCCGCCCAGCGTCCTCCGGGTTCGGCGGCCCAGGCGCACAGGGCCGAGAGCCCCAC EMBV3_40932 AAGCCCTTCTTCCCTAAAGATACTTGTAATCAGGGATGTGTGTGAGGGGTGACCACCAGC Gene GeneID:519940|RDH16:NM_001075796:1043_cdna Constitutive 0 NULL GeneID:519940 5 GENE RDH16 NULL retinol dehydrogenase 16 (all-trans) EMBV3_09314 GGCGTAGCGGCGTTTAGGCCGAGCTACCGCGGTGCTACAGGCAGCGGCGGTGGGGCTTCG Variant GeneID:616181|UPF3B:NM_001076411:29_cdna 62^143 2 EMBV3_04830 GeneID:616181 X GENE UPF3B MGC134301 UPF3 regulator of nonsense transcripts homolog B (yeast) EMBV3_19111 TGGAAGAGCAAGTAATGTTAACTGAAAAAGAGGTGCCTCTGATCTATCCAGCGAAGAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30657 TGTTGCTCGAAATGCCAAGGACTGTCTGGTTTCCTACTACCACTTCCAGAGGATGAACCG Gene GeneID:523898|LOC523898:XM_002691339:511_cdna Constitutive 0 NULL GeneID:523898 11 GENE LOC523898 NULL similar to sulfotransferase K1 EMBV3_24114 AAGAGCTCAAAGCTGTCCGCGTTTCCACAGAAGCGAGTAGAAGTATCGTTCCAGTGTCCC Gene GeneID:534054|RP2:NM_001035403:11_cdna Constitutive 0 NULL GeneID:534054 X GENE RP2 NULL retinitis pigmentosa 2 (X-linked recessive) EMBV3_29406 ACATGGAGGCCTGGAGCTTGGGTTCAAGGAGGCAGGCTTGGTACTGGAGTCACTTCTGAT Gene BVT0102_318537 + 0 NULL GK000024.2:26448152-28992665 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138719 1 XLOC_084716 NonCoding TCONS_00138719 XLOC_084716 NonCoding NonCoding - 24:27506920-27534837 - TSS103896 1017 2 TCONS_00138719_3 68 0.452310717797443 3 0.963676744519272 0.000682290419926651 2.96414675870503e-05 0.000418567750679826 8.1653411071428e-06 0.000276715640172948 6.68279623147582e-05 0.000194963612784693 2.32634163483687e-05 0 0 4.50185483199458e-06 0 0 0 0 0 0 0 2.11531678887432e-05 0.00250320493529269 0.000167159190750876 0 0 0 0.000122627887332684 2.77108819695212e-05 5.18508603909517e-05 0 8.59220789737617e-05 0.000384264085752188 0 noncoding 0 0 0 0 -0.148985838588008 0.212898404291695 0.0148989996078021 0.790192503835863 TCGAGCTGCTCCCAAGTCACCGAGTTCTGCGGCTGCAGCAAACCGAGGCCTGCAGGTCCGGACACCAGCGGCTTCAGACGGCTTCCCTAGCACCAAGTTCTCGCGAGGAGGTTCTCCGTGAACTGAGGCTCAGCTCACCTGGGCATCAGCGAGCTCCTGGCCTAGGCGAGTCTCAGGGCGCCGGTTGGCTTCCTTCTGCCCAGGCTCTCAGAGAGCCGGTGAACATAGGCCCACTGGTTCATAGAGTGGCAGATACTCCTGTGGGAGGACACAGGTGGCTTCCCAGAGAAGTCCCATGAGGCTTCTGAGCGTCTGGCTCTCCCAGCCAGCTGAGGCCTGGAGCCACCACCGTACCTCAGGGTTCCTGCGGCTCCTGTGCAGCACTGTGGACTCAGAGGCCAAGCATAAGCCATTATTCCAGGCGCCTGGTTGACCCCTTTGGAGCCAGAGTCAAGGGCCCAAGCCCATCAGAAGTGACTCCAGTACCAAGCCTGCCTCCTTGAACCCAAGCTCCAGGCCTCCATGTCTGGACCGTAGCACCAGGGCAAGCCCCAGGAACCAAAACCCAGACCAGCCCACCTGCTGACCCAGGCACCAGGCCTACCTGCCCAAGGTCTCCAGCAGCCATGTACACCAGCAGGATCTCTGAGGGGCTGACTGGTGACAGGGTTTGCCTAATGAAGCCCGTCTCCGAAGACTGGAGGAGGTGCCTACACCCTCAAATATGCAGACGCCAACGGAAGAGCACAAAGATCCTGATATCAAGGAAACGGCAATTCCTCTAAAGGAAACTGGCAAAACTCCAGTGACGGACCGAAAGAAAGGGACACCTACGAATTGTCTGCAGAACCTGGGCGGTCTTCTGTTTCTGGATTGGAGATTGAGAAATGAAATTTCTGGGATGAATAAACAGCTACACAAGATGGAATGATCAAGTCCTCCTGACAGTGAAAACTATTTAACTGCTCATGGTGGGAAGCATTAGATCTTCATATACCACACCTTCAGGGGATTCGT TCONS_00138711 TCONS_00138714 TCONS_00138715 TCONS_00138717 s 3' 1057931 TCONS_00138711 TCONS_00138714 TCONS_00138715 TCONS_00138717 s 3' 1057931 EMBV3_01306 CTTTTCCGGGAGGCTTATGCTGCCATCGAGTTCTGTGGCACTTGCCCTGGGTGCCCTAAC Variant GeneID:506085|ZDHHC16:NM_001024482:87_cdna 698^831 2 EMBV3_30769 GeneID:506085 26 GENE ZDHHC16 MGC137909 zinc finger, DHHC-type containing 16 EMBV3_38080 TACCAGCTGAAGAACAAGGTGTCTTGTGGCTGTCTATTGGGGCTGAGGTCCTGAATATCC Gene GeneID:526866|LOC526866:XM_002695883:400_cdna Constitutive 0 NULL GeneID:526866 19 GENE LOC526866 NULL similar to hCG1653800 EMBV3_33580 GGGGACTTTCAAACGCCACCGGAAAATCCATTCTAAAAGAGTCACCCAGTACCCACCATC Gene GeneID:518698|LOC518698:XM_002692678:50_cdna Constitutive 0 NULL GeneID:518698 14 GENE LOC518698 NULL similar to zinc finger protein 371 EMBV3_34435 TTTGGGAGGTCGCATTGAAGCACTTTAACACCAGTTTCTGAGCAGACGTTCTGGAAGCTG Gene BVT0101_029092 - 1 EMBV3_41796 GK000020.2:62697439-62725183 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117978 1 XLOC_072144 NonCoding TCONS_00117978 XLOC_072144 NonCoding NonCoding - 20:62719238-62722444 - TSS88446 3206 2 TCONS_00117978_4 71 1 0 0 0 0 0 7.69990265277624e-07 0 0 0 0 0.000372178456507194 0.00011138901491367 2.00755799861893e-05 0 0 1.68334769923169e-05 0.000115334585960763 0 1.5652476814985e-05 0 1.12155759665031e-06 3.31411749996532e-06 0.000185169645293134 1.43076152235155e-05 2.09165670208967e-05 2.16109636999537e-06 0 0 6.89079825332697e-05 1.05995676752246e-05 0.000472578645878158 NM_001164440.1 ANKRD33B Homo sapiens ankyrin repeat domain 33B (ANKRD33B), mRNA. 1e-112 412 73.93 0.210230817217717 0 noncoding 0 0 0 0 -0.0814010781844418 0.672824000840228 0.0487847572240076 0.406295205550729 GTTCAAAGGTCAAAGGGAAAGACACATTCTTTCTGCTGAACAATATATCCCATCTAACTTAAAGATGATTAACCTTTTGGATATCAAGAATTGAAATGGCTGAGGTCACCTTTATTTGTAGGTCCCCAAATAGCCCTGAGGTCTAAATAGGAAAATATCTTTTATAAACCGTAACAAAACTCTCACCTCAAAATAAAACGCTATGAAATTTACACAATTATATCCTTATTCAACATTTTTACAATGTCCAGAAACCCACCGGATTTTTAGAAATGACAATGAAAATAGTTTTACATTCAGAAAACAAAGCTTATACCAACGTGACATAACCTGAAGCCTGGCCCCTGTGCAGAGTGCACACAATTCTTCATCACCCTTGTTAAAGACGTATCTTCAGACACCCAGCGTGTGCCAGGGAGAACGAGGGTTTGAATGAAAAGGATTCCAATGAGATTTGCCTTGCCTGTTTGTTTCAATGGGGTCTATTACTCAAATTCCCTGGGATGTCCCAAAGGTTCACAGGGTTGCTGGTAACACTGCCAGGTTTCTAGCATCCTTTTCTGGTTTTCATCCAGTTTTGAAAGAGCCATGAGTTTCCAAACCAGCTTCCAGAACGTCTGCTCAGAAACTGGTGTTAAAGTGCTTCAATGCGACCTCCCAAAAATCTCATAAAGCATCAGCACAGGCCACTGCTGGGCCTGCCTGGGTTCGTTTAGTTTCTCATCCACATTTTCTTCAAAAACAGGAGAAAAATGTCCCGTTATCATGAAGTGATTCTCTCAAAAACCAAACTGCATGAGCAGTGATCGATTAGGGCATCTCAACACTTGGACAGACTCGGGGAATTCTCAGCAGCCTCCTGGTTCTGCTTCTTAAGTCAGCCTGGTACCGAACCATCTGTGACCCCAGGCCGAATACCTGGTGGAGCTCCCCCCAAGAATCCCCTCTGGATTCTGCCACTCCACGCCAGGGATGCAGCCAACAGCAGAGAGGACCCAGGCCCGGCTACACAACCTCATCCAGGAGCCGCCCAGGCCAACACCACCTTTTGACAAGGACACCTGGGTGATGACACGCTGGTTGTGTTCTGTGCCACACTGGACACACTTGAGGGGTCCCGGTGGGGGTCTTGGGCTGTCTCATCCTCAAATACACCAGGTCATAGCTGATATTCCCTGGCAGCTATAGTGGCAGTCCCCTTCGTGAGCACGAAACCCAAACTCCTTCCTGTGGGTGTGTGTGCACCCGCTCACATCACGTCACACGCCTCCCCTTGCAGCTGAGAGCCGTCAGACCACTGCAGGGCTTGCCTTTCACAAGAGCGTTATTTCAGGCTGGGTCAGGGGAAGGAGAGATTGAACAGCAGCCATCTCATTCAACTGAGTTCCTCAAAAATGAGCTAAATCAAACCAGGTTGTGATGGTTTGGGGAAGTGGGGCGATTTTGTTTGCTTTTCTATTTCTTAAAAAAAAAAACTTCCAGTGAACTTTTTTTTAGCTGCTGGTTTTAAATGTTAATGAAGACACACGAATTCATCCCTGACACAAGAGTTACCCAGAGGTTTGAAACAAATTCTCCATGCTGGAACTGGCAGGGCAACCAGGGTTTCAGGAAGAGCTGTTTTGTTGCAAGTTCTTTATAGCAACAGCCTCCCCCCCCACCCCGCCCCCACCGTGGTCACGATTATGTATCAATTTATGTATCAATGCCAGTTGTCCAGGTGAATGGGACTTTGTTGTTTAATCGCTCCTGATGGATCCTCCCGCTTTCCTTCCCAAGAAGACATGGTCCCCCAGGCCCCGCTGAAAGGGGCTCAGTGTGAGCCTACTGCCCAGAACAGCAAGGACCAGACACACAGGCCAGAGTCCTGAGGGATCACCGTGAGCTGGGCACCCACAGCCAAGGGCAGAATCCAAACAGCTCCCCATGGGGCTCGTGAGCGTGGGGGGCGTGTTAGAATGTCCGCAAATACTTAAAAAGTGCCAGCACTTCATTTGGTAAAAACAGTTGCAACAAGAAGCTTACAATAGTTCCTGATCAATCTCAGCACTGCAGGGAATACCTGCATCGTATTAGATATCAGGATGGAGGATGAAACAGTGAGGGGTCCCAGGTGAGCCTGGGACTAGGGCTCATTTCGCAGAGCAAGCTCGGGCGAAGGATGCAGAGACGGTCTTCTGTCTTAATGTAGTGTGGGTCAGGGGGGAAAACTGTGCCCCTGCCAGAGGCTGTGGGAAACAGATCAGCCCTTCTTATTAGTCTTGGCTCCTTCATCCATCCCTTAGGAGTGCTTCACTTCATAGTAACTGGGTACCTGTGACTCTTCCCGGAGACTGAGGGCTTTGCATCCAATTCAGTACTGTGGTCTGGCCCTCACCTCGTGGGATTCAGTTTCAGAGCCTCATCTCTACTCAGTGGACTTTCCAGAGACCTGGCTGGCCACTGATGGCCCCGAAGGAAGTGGGCAGAGGCAGCTTGGATTGGCCCACCCATCCCCACACCTACAAATCCCACTTTCCAACTGACATCACAAACTCAACCCTCCACCGCAGAAGGAGCGAGTCGCAGGAGGGCCGGAAGTTGAGATGATGACCTAGTGCAATTTCCAAGCCCATTTCTGAGGTTTCTGGTGCCGCCAGGAGCCCGTGGGGAGGCGCTGCAGAAAAAAGTCACAAAGGTTCATAATGTTGCATTCCTTGGGTGTAGCCGAAGACATGGAAGGTCTCTAAACACCATGGTCATTCCAGCTTTTCCCTGCCCTCTCCCGGCAGTGAGCCTGGCACAGGGCTGACTGTAGAACATGTGATTCACGGAAGCAGAGAGAAACACCATCCTTCTCACACCACACACGCAGGTATTGGATGGGGAGGAACCACTTCTAGAGGTAAAATCGATGGGTGGCCCATCTGTGTTGTCACAGCCACCTCTTCGTACACAGAGGTTGAATTTTTTTTTCCTAAATACAAGGGTTCGCTTCCACGAGAGGCAACTGAGAGGCCCTGAGAAGTGACTTCACGTCCACTCCAAAGCCATTTCAGCCACCAGAGTCCCGAGGTTCTAAGAATCAAGAAGTCTCAATGGGAGGGGTGATTCCCAGGCATCGCCCTGGGGAAAAAGCAGCACTGACATTATCTTAGAAATATTTCTTCTGTCTAGTGTGATAACAACTCACTCAGATGCTAAAAAGTATTAAAATATACTTCACC TCONS_00115218 . 3' 669 TCONS_00115218 . 3' 3874 EMBV3_24746 TGTTCTGTCTCCTTCGTCCGTTTGTTTTCCAAAGATGCTGCTGGGCAGACGGGCAGGGAA Gene GeneID:540768|KCNC4:XM_002686148:267_cdna Constitutive 0 NULL GeneID:540768 3 GENE KCNC4 NULL potassium voltage-gated channel, Shaw-related subfamily, member 4 EMBV3_11335 GGACTGTGAGCAGGGAATCACAACCCTATTTTTTCCTCTGGTTTCTGATGCTCCCCATCC Gene BVV0102_193795 - 1 EMBV3_17016 GK000004.2:104680494-104715492 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182631 TCONS_00182630 1 XLOC_110913 NonCoding TCONS_00182630 XLOC_110913 NonCoding NonCoding - 4:104708282-104712713 - TSS136431 777 1 TCONS_00182630_1 77 2 0.825056433408578 1.92899265425146e-11 0 1.28786139388043e-11 0.00043818487526723 8.3705913812666e-09 0.000108761357541047 0 1.09356874110107e-08 0 0 0 0 0 0 0 0 0 0 0.000516824553357247 1.85107684080213e-05 0.000414141029750626 0 0 0 0.000222924050026359 0.000108810230513288 0.00124421820670432 0 0 0 0 noncoding 0 0 0 0 -0.0321809718380321 0.756470758108443 0.00560605289400791 0.913061497990224 CTCAGCTCTGGAATCCACACTTGTGGGGTCATAGCTTAAGGGTCAGCGGTTGAAAATGCCTTGTGGGGGTGACTCCCCAAACAGTTATCACCACAGCCTGATTCTCTGAGAGAGCTTATCTCTGGGCCGAGGGAAGGTGGAGCTCTGAGGCTGAGAAAGGAAGGAGGAGGGACTGCCATCTAGAAAGCAGAGGAAGGAGGGAATATCAAGCGTTAGCAAAATTCTGCTGGGCCATGCAGACCACATGCGCTTGGTCTTGTCCTCAGCCTCCATTTGTTATCCCCACACCTCTGAGGAATTAAAGGGCTCCTTCACCACCTCCTGGATCAGTCCTGCAATGATGCCCTATCTCCGGCCAGTTACCAAGACATGCCAACCACACCTGCTCCCACTCATCCCTTCCCTTGCCCACCAGTGTCTCGGAGAGTCTACAGCAATGAAACCCACCCAGAAGTCCTGCTCCAATTGGTTTTCATGACCATGTGATTGACCCTGAATTGAAACACGATAATGGAATGCTTCTAAATACACATTCTTCTTGGAAAATGTATGAAGTTTTTTTCTTAATTTTTTTAATGGAATCAGAGGACTTGGTTCTTGGACAGACTGTTGGTGTGAGGTAAGACGAAAAGGTTGAGTGGCCATGTTCTAACACACCCATGCTTCTTGGTCACACTTGGTTTCTAAACCCAAATAGCATTGTCCATCCAAGGTCTGCCCTGGACTGTGAGCAGGGAATCACAACCCTATTTTTTCCTCTGGTTTCTGATGCTCCCC TCONS_00185179 TCONS_00185180 r 3' 2780 TCONS_00185179 TCONS_00185180 r 3' 7210 EMBV3_22522 AGAAGATGACAGAGGAAGAAGTAGAGATGCTGGGAGATTGTGTATGTAGCCCGGACGCTT Variant GeneID:281341|MYL6:NM_175780:893_cdna 413^569 10 EMBV3_05147 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_33629 CGAGGACACATTTAGCCAGGCTGATTTCAGAATTGGCAGACCACAGGGACTGCTTTAAGC Gene BVT0102_251727 - 1 EMBV3_15764 GK000002.2:18693728-18759168 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104571 TCONS_00104570 1 XLOC_062409 Coding TCONS_00104571 XLOC_062409 Coding Coding RBM45 2:18752421-18776379 j TSS77394 2437 1 TCONS_00104571_3 474 0.0767336889618383 11 0.898735233960847 0.000624761894998519 0.000301042372734763 0.000384333986949121 0.000188820484330235 0.000529843940071866 4.85275214378962e-05 0.000241472477897175 0.000129068751963148 0.000125752489248413 0.000139599236926429 5.64783565044276e-05 0.000165582495699216 3.77272650294257e-05 9.85042338037132e-05 4.00147419852915e-06 0.00162854159550887 0.00148723449465055 0.000976800883847464 0.000816566506938538 0.00108849382466033 0.000523351053524279 7.82753395595149e-05 0.000212439231054442 0.000823994538302226 0.000608009595732092 0.000929933484977865 0.000260351376137858 6.44648009258285e-05 7.30962610147484e-05 0.000320359705716308 NM_001130753.1 RBM45 Bos taurus RNA binding motif protein 45 (RBM45), mRNA. 0.0 2780 100.00 0.631924497332786 NM_152945.2 RBM45 Homo sapiens RNA binding motif protein 45 (RBM45), mRNA. 0.0 2188 93.51 0.593762823143209 TCONS_00104571_3 sp|Q8IUH3|RBM45_HUMAN RBM45_HUMAN RNA-binding protein 45; 0.0 946 95.59 0.99789029535865 4 coding 1 1 1 0 0.0690499436341832 0.556770998182688 0.013287535548212 0.781809974599639 CCAAACTTTTCAGTCTTCCGGAAACGGACCCCGGACCGGCAACGGCTGGGTGTGGTGCGACGGTCGTGGCTGTAGCACGGCTGGAGCCAGGAGGAGTAAAGGGGTGCGAGCCTGGATTCCGCCCCGGGTGGAGCACCATGGACGAAGCGGGCAGCTGTGCAAGCGGCGGAGGCTTCCGCCCGGGCGTGGACAACCTGGACGAGCCGCCCAACAGCCGCATCTTCCTGGTGATCAGCAAGTACACTTCCGAGTCGGTGCTGAGGGAGCGCTTCTCGCCCTTTGGGGAAATCCAGGACATCTGGGTGGTGCGCGACAAGCACACCAAGGAGTCCAAGGGCATCGCCTTCGTCAAGTTTGCCCGCAGCTCGCAGGCCTGTAGGGCCATGGAGGAGATGCATGGCCAGTGCCTCACCCCCAGCGACACCAAGCCCATCAAGGTTTTCATTGCTCAGTCCAGATCATCTGGAAGTCACCGAGATGTTGAAGATGAAGAACTTACAAGAATATTTGTTATGATACCAAAGTCCTACACAGAAGAAGATCTACGGGAAAAATTTAAGGTGTTTGGAGATATCGAGTATTGCAGCATTATTAAGAATAAAGTAACTGGAGAAAGTAAAGGCTTGGGCTATGTTCGGTACTTAAAACCATCACAAGCTGCCCAAGCAATAGAAAACTGTGATCGAAGTTATAGAGCAATCTTGGCTGAACCTAAAAACAAAGCATCTGAATCCTCAGAACAAGATTATTACAGTAATATGAGGCAGGAGACTTTAGGACATGAACCTAGGGTAAATATGTTTTCATTTGAACAACAATCTGAATTTTCAAGTTTTGACAAGAATGACAACAGAGGCCAGGAAGCTATCTCCAAACGCCTGTCAGTTGTATCAAGAGTTCCTTTTACTGAAGAGCAGCTTTTCAGCATTTTTGATATAGTACCAGGCTTGGAATACTGTGAAGTCCAACGAGATCCTTATTCTAATTATGGTCATGGAGTGGTTCAGTATTTTAATGTAGCATCAGCTATTTATGCAAAATACAAGTTACATGGATTTCAGTACCCTCCTGGGAATAGGATAGGTGTTTCCTTCATTGATGATGGGAGTAATGCAACAGATCTCCTTAGAAAAATGGCAACGCAGATGGTCGCTGCACAGCTTGCATCAATTGTGTGGAATAACCCAAGTCAGCAGCAATTTCTGCAATTTGCAGGAAGTTCTGGATCACAGCTGCCTCAAATCCAGACGGATGTTGCACTACCATCATGCAAAAAAAAAGCTCCTCCTGACACTCCTGTGAAGGAAAGACTTTTTATCGTTTTTAATCCACATCCTTTGCCTTTAGATGTACTAGAGGATATATTCTGTCGTTTCGGTAACCTGATTGAAGTTTACCTTGTGTCAGGAAAAAATGTGGGGTATGCCAAGTATGCTGATAGACTAAGTGCTAATGATGCCATTACAACTTTACATGGAAAGATCCTGAATGGAGTCAGACTCAAAGTTATGTTGGCAGACTCCCCAAGAGAAGAATCTAACAAACGACAAAGAACTTACTGATTCTTTAGAAACAGTAACTCAAGAACAGTGGATCCTGTGAACTGAAGTGGCCCTGAAGCCTCACCGTCTTGGAGCTTTTCCTTAACCAAGAGAACCACAGCTGACATTCACCGTGGGGTGGAGAGAGTTGTGGAAGAGATCCCACCTTTGACCAGAAGAGCAGTGCTGAATGACAAAGGCAGTGCAAGCAGCCCAGAAAGATCTTCCGCCCATCAGCAGATTTAGAACACTTAGAGCAGGATTTTTTTAAACACTCATCCTCTATCCTAAGAACTTTGGTCTTATTGCATGAAAATCCCTTAGCCTTTTCCACCCTAAGCTTAGATCTACAGACATCCTTGCGTTTCCTGGAGAAATGGAATGGGCCTGATATTTCAGACAATGTGCTGGATATTACATCAGCATTTTAGTGAACTCTGAAAGAGCTTAAAGCAGTCCCTGTGGTCTGCCAATTCTGAAATCAGCCTGGCTAAATGTGTCCTCATTGAGATATGGGCAAGAGATTTACGCTACTGGCACTTGACAAAAGAAGGCCAAGAAAGGATTGCAGTTGTCTTCTTTTGGCAGAGGAAGGGAGGATTGGGTAAATTCTTTAGTCTTTGTGAAGAAACATTAAAACATTCTCTCATTAAAACATTTTTTACCTTGACATTTAATGTAAGTTGAATCTTTTTAAAATCAGTTAAATGCTCAGTAATGCTAGTCATCAAGGAAACATTAAAACCACAGTAAGATACCCCTCCACTGGTAAGAGCAGCAAAAATTAAGGTATCAGCAATACCAGATGCTGGTATGAGTGTGGAGCAATAGGATCTCTCATAACTTGCTGATGGGAGTGTAAATTGGTTCAACCATTTGAGAAATATTTGACAAAT EMBV3_30045 ATGGGAGGGTACCCCACTGAGCATCTCCATGTTCTTCCTTCCCCCAATCAGTTAGAGAAG Gene GeneID:785460|LOC785460:XM_002697070:579_cdna Constitutive 0 NULL GeneID:785460 22 GENE LOC785460 NULL similar to mCG51523 EMBV3_37289 GGTGAAGGAGTTCCTCTCTCTCCAGCAAAACTGAATGGCAGCGACAGTTCCAAGAGCCTG Gene GeneID:520515|CRAMP1L:XM_002697915:545_cdna Constitutive 0 NULL GeneID:520515 25 GENE CRAMP1L NULL Crm, cramped-like (Drosophila) EMBV3_25217 GTCAAGTAAACTCATGGTTCATTAGGAAGGTCGATAAATTTCTTCTGGTCACTTCCTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12624 CTGAAGACTGGGTCTGGCTCCTGGTCTCAAATCTGTTTACACGTCAATCTGCCTCACTGC Gene GeneID:539015|LOC539015:XR_083671:189_cdna Constitutive 0 NULL GeneID:539015 5 PSEUDO LOC539015 NULL similar to lipocalin-interacting membrane receptor EMBV3_39494 ACCCTCTTTCAGGTCATGGCCACCAAGCCAGAGACGGACGACAAGGAAAAGCTGAAGAAA Gene GeneID:522574|ZFYVE28:XM_002688438:72_cdna Constitutive 0 NULL GeneID:522574 6 GENE ZFYVE28 NULL zinc finger, FYVE domain containing 28 EMBV3_27383 ATCAGGGATCGAATCTGTGGCCCCTGAGCTGCAAGGCGGATTCCTCACTGCTAGGAAAGT Gene BVV0101_023090 - 1 EMBV3_03999 GK000022.2:58148609-58202079 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09924 AGGACTCTTCCAGTCGTGGGCACACGAAGGACCTGTACTCTGGCTGGCTGGCGGAAGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18644 TGAGTCCCTTCTCTGTCTCTGTTCTAAAATCCATGATGTATGAGTTGTCCTCAGGCCAGC Gene BVT0102_087259 - 1 EMBV3_38751 GK000010.2:73510169-73628026 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022127 1 XLOC_012798 NonCoding TCONS_00022127 XLOC_012798 NonCoding NonCoding - 10:73514900-73516083 - TSS16017 1183 2 TCONS_00022127_4 80 0.345731191885038 1 0 2.30020215656708e-05 0 9.38698999820296e-05 0 0 0 9.859190618588e-06 0 0 0 0 0 0 0 0 0 0.00421021023589416 8.48383173510927e-05 0 0 0 0 0 2.83425785332607e-05 0.000374828149868452 0 7.92446880662042e-05 0 0 0 NM_000554.4 CRX Homo sapiens cone-rod homeobox (CRX), mRNA. 4e-07 60.8 77.17 0.0760777683854607 0 noncoding 0 0 0 0 -0.207376078586999 0.132015354762262 0.00107936748274466 0.984937162327223 GAAGTTTTCAATTTTGGCAGGAAAATGAGGTCAACTGACAAAAACAAGTGTTTCCTACCCAGGCAGGTTCTTTTGGAATATTTTTAAAGTCACTTGGATTCTCCTATTTATGAGTTTTTTTAGTCTTACTCAGACCCCCAGTGCTGTGTTTTCCAAAGAGAATGAGCAAGCATCAGAGCCCTCCTCAGATCATATTGATTTTTGTTCTGAGTCCACCTCCCTATTTTTCTTCCTAGCTAAAAGAACCCCAGTTTTGTTCTGGCATTCAGCCTGAAGGAAGGGGACCATTTTGCAATAATGTTTATCCCTTTTGCTAGATGTTTATCTTCAAGATGGCTCTTTAGGGAAAAGAAAAACCCTGTATCATGTTTGCCAGTTCCTGTGGTGTAAATATGCCCACCACGGACAGTCTCAGGCTACCAACAGGAGATCACCAAATGGAGGGTGTGGGGAGAGACGTGTGCTGTCAGCTCTTTTGAGCTGATATGAGCTGCCCTATGGCCACCCAGGGACCATGGGTCAAAGTCAATCATGGTGATGCCATCTCTCTGTAGTAATTGGCTTGTGACCAAAAAATATTCTGGGGCAGTACTGAGTGCTTTAAGAAAAGTTTTCTTTATCAATAAAGGAAGGGGTTGCTTCTCTTATTTCACTGCAGTAATTCATACTCCACTGCAGTTAGTACTGACAGGCATCTTGTGGTCGTGAAGGCAGCTGGCCTGAGGACAACTCATACATCATGGATTTTAGAACAGAGACAGAGAAGGGACTCAGGTCCTCGGTGATGTGATGAAGCTGCTGAAAGCACTGTGTTTCAGGACTTCTAGTTGTGCATTCCAAAATATTCCAGGTTGTTGAATCTCTGTGGGCTGCGATTTCTGTTACTAGCAGTAGAAAGCTTCCGAACTGATGTATCTTCTCTGCACTGATCACTCAGAATCTCGGCAGAGAAGACACACGAGTTATTACTCAGCCTGTAGCACCGCACCAGGGGTGACTGCGGAGCAGAACTTCAAGGATTCCGCAGCAGTGGAGCTCAAAGTCAGCGTCTCACAGCTCATTCTCTCTCCCCTGCACCACCATCCAAAGCCCATTTACCATGTGAAATGTCACCAACTTTCTGTCTCGCATATCTTGCTCCAGCAGCGTTAGCTCAGGTGATGTAGGACATTACTAGGGCTCC TCONS_00014690 TCONS_00014691 TCONS_00014692 TCONS_00014693 TCONS_00014694 TCONS_00014695 TCONS_00014699 TCONS_00014700 TCONS_00014701 TCONS_00014703 TCONS_00014704 TCONS_00014705 TCONS_00014706 TCONS_00014709 TCONS_00014710 . 3' 63058 TCONS_00014690 TCONS_00014691 TCONS_00014692 TCONS_00014693 TCONS_00014694 TCONS_00014695 TCONS_00014699 TCONS_00014700 TCONS_00014701 TCONS_00014703 TCONS_00014704 TCONS_00014705 TCONS_00014706 TCONS_00014709 TCONS_00014710 . 3' 64240 EMBV3_20758 GACCATCCCATTACTATGTCCTTTGGGATGACAACCGTTTCACAGCGGATGAGCTCCAGA Gene GeneID:522972|EIF2C1:XM_002686476:536_cdna Constitutive 0 NULL GeneID:522972 3 GENE EIF2C1 NULL eukaryotic translation initiation factor 2C, 1 EMBV3_22827 CTGTTAAGATCCCACTTTACCAGGTCCCAGGCTTATGGTTTCAGCATTTCCCCCTCTTGG Gene BVT0102_209780 + 0 NULL GK000008.2:63365680-63509719 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22714 CACCGAGTGCAGCCTCCTGCAGGGGGACGAATGAGTGACGGCTTGCTCTTTGATACCTCA Variant GeneID:100299092|LOC100299092:XM_002691281:358_cdna 265^373 1 EMBV3_42316 GeneID:100299092 11 GENE LOC100299092 NULL similar to fasciculation and elongation protein zeta 1 (zygin I) EMBV3_34606 TGGCGGCGGCCGGGGCCGAGGCGCCAGGAGGATATGGAATATTATCTTGTAAAATGGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23089 CCCCACTTCCCACCAAAGAGAAGGCCGGTGGTCTGTGCGTAAGTAGTTTGAAAAAGAAAC Gene GeneID:615089|PGPEP1:NM_001109983:116_cdna UTR3_Alt 3 NULL GeneID:615089 7 GENE PGPEP1 NULL pyroglutamyl-peptidase I EMBV3_25026 TGTTAGCTTCACTTGGATTTGGATGCAAACTTGACTGCATCATACCCTGATCAACTGGGC Gene GeneID:539643|VCPIP1:XM_002692680:58_cdna UTR3_Alt 2 NULL GeneID:539643 14 GENE VCPIP1 NULL valosin containing protein (p97)/p47 complex interacting protein 1 EMBV3_10497 GCTGAAAACATGAAGAGACTCCGTTTTCTGTCTGGATTGTTATGGAGCAGACACTCTCGG Gene BVT0102_059854 + 0 NULL GK000001.2:111033869-111317358 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001816 TCONS_00001818 TCONS_00001817 TCONS_00001819 TCONS_00001820 TCONS_00001815 1 XLOC_000443 NonCoding TCONS_00001819 XLOC_000443 NonCoding NonCoding - 1:111228970-111232016 - TSS936 1272 2 TCONS_00001819_6 73 0.385220125786164 2 0.582922824302135 7.01905391696205e-12 0.000331713472614541 4.30679544308148e-10 1.59334219688891e-11 0.000236509134020175 1.38066745106276e-05 0.000788909484968462 4.67361560936648e-16 5.5402139972689e-05 9.34843848492169e-30 0 0 5.58724511116096e-10 5.17533100853798e-05 9.297861614313e-10 0 0 0 3.71783421947548e-14 1.59056429414794e-09 6.10706481936433e-13 0 0 0 3.44851499185532e-18 0.000351801899687289 2.9414584804708e-05 0 1.07978427538302e-09 0 XM_005196293.1 LOC782598 PREDICTED: Bos taurus kinesin-like protein KIF20B-like (LOC782598), 3e-34 150 67.74 0.325471698113208 NM_145702.1 TIGD1 Homo sapiens tigger transposable element derived 1 (TIGD1), mRNA. 8e-54 215 71.78 0.331761006289308 0 noncoding 1 0 1 1 -0.44076248911958 0.079075915877693 0.0160942545506386 0.791895825090511 AGTTTAAACAAAATTCAAGAAATTCTGCAAAACAAATGAAGACCTTTCTGAATTTTTGGAAGGAACTTATCAGGGCTACAGATGTCATACTGACGCAGGTCCCAAGGCCCCTGAAAATGTTAGAGTGGGAAATTTGACCTTTTTGGGCAAAATGCCTCAGGTATCAAGAACAAGTTGCAGAAATTAGATGGTACCTTTAGAATGAACCCTTCTCAATTGGTAGATGTTGCTTTTAAAAGTATTCAACAGAAAACAATAGAAGAAAGAAGAAGCAAGATGAAATGCCAAGTTTTTGGCAGCGGCACTGGATTCCCAGAGGCAAGGAACTGAAGAGATCCCTGGAAAGGACAGGCTTGGAGTGGTGGTGAGGGTGTAGGTTGAAAGTTCAAAGGCTACTGAGGTTACAGTGAGTAGCAAAGCAGAGTACCTCCACTTCAATTACAAAGTTCAAGAAGGCAAGAAACCCCCTGAAGACGGAATTGAAACAGCAGATGCCTCAGAGCTCTGACTGCTGACAATGCTGAAAACATGAAGAGACTCCGTTTTCTGTCTGGATTGTTATGGAGCAGACACTCTCGGTTTATACCCTCCAGGGGAGATGGAGAGATGCTTTCTGTAAATAAGAATGAGTGACTTGAAGGTGATCTGTTTAAATAGTCAGCTTGGGTTGTCCTTACCTCTCAGGAAAACAAGCAGCCCCATACAGCTGAATGTCTTTTGGTGTTATTAAGGAGAATGACACCAGGGCTGTGAAGTTAGTCACTGACTTTACATCTATATGTACCTGTTTTATCTTGTTTTGCAAATACTGTTTGGCTTCTTGTTTGTTTGTTTGTTTTTTAATAAATCGAAGATCTGTGGCAACCCTGCATCAAGCCAGTAATTTTTCTAGCAGCATTTGCTTCCTTCCTGACTTTGTCACATTTTGGTAATTCTTGCACTATTTCAAACCTTTTCATTATTTGTTATGGTGAGCTGTGATGTTACTATTGTAACACCTATCCACTGATGTTACTACTGTAATTGTTTGGGGGCACCACAAACTGTACCCATGTCAGATGACAAACTTAATCAATAAATATTTGTGTTCTGACTGCTCCACCAACAAGCCTTTCTCCATCTCTCTCCCTTTACTAGGGCCTTCCTATTCCCTGAGGCACAATAATACTGAGATCAGGCCAATTGTAACCCTTTTAATGGCATCCAGGTGTTCAAGTGAAAGTCACACATCTCTCACTTTAAGTCAAAAACTAAAAATGATTAAGTTTAATG TCONS_00001810 TCONS_00001811 TCONS_00001812 TCONS_00001813 TCONS_00001814 s 3' 17103 TCONS_00001810 TCONS_00001811 TCONS_00001812 TCONS_00001813 TCONS_00001814 s 3' 17103 EMBV3_27928 TGCAGCGGAAGATGGTGGACCTAGAGAGCGAGAAGGAGCTGTTCAGTAAGCAGAAGGGCT Gene GeneID:614810|JAKMIP3:XM_002698607:38_cdna Constitutive 0 NULL GeneID:614810 26 GENE JAKMIP3 NULL janus kinase and microtubule interacting protein 3 EMBV3_02799 AGGGGGCCAGTGTACGTGTCGTTGTTGTCGGTCTGTTGTTGCACATTCCAGGATATCAGT Gene GeneID:527935|GLIS2:XM_002697950:645_cdna Constitutive 0 NULL GeneID:527935 25 GENE GLIS2 NULL GLIS family zinc finger 2 EMBV3_17534 AGATCCTCAGTTACTTCATGCCCTCCCTAGGAAAGCTGTCAGAGAGTCCTTTGGAATTGC Gene GeneID:538943|GINS3:NM_001076136:369_cdna Constitutive 2 NULL GeneID:538943 18 GENE GINS3 MGC139995 GINS complex subunit 3 (Psf3 homolog) EMBV3_05452 GGAACCCAGAAAAGGTTCCTGAAGTGTGCTGAGAAGTACGTGTCTGGGAAGTACCGTGAG Gene GeneID:520133|ADAMTS16:XM_002696458:69_cdna Constitutive 0 NULL GeneID:520133 20 GENE ADAMTS16 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 16 EMBV3_29416 AGCCCACCACACCTTTGCGCTGTAGGAATGCAACTTTATCTAATGCTTTTGGAGGGTGGC Gene BVV0102_171269 + 0 NULL GK000018.2:59366625-59385749 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023551 TCONS_00156814 TCONS_00218607 TCONS_00204180 TCONS_00099337 TCONS_00220136 TCONS_00233550 TCONS_00138407 TCONS_00019267 TCONS_00132405 TCONS_00199292 TCONS_00138406 TCONS_00018727 TCONS_00229177 TCONS_00148378 TCONS_00206254 TCONS_00201404 TCONS_00099296 TCONS_00132962 TCONS_00196654 TCONS_00025023 TCONS_00110358 TCONS_00251038 TCONS_00022175 TCONS_00167486 TCONS_00220245 TCONS_00251001 TCONS_00056822 TCONS_00006012 TCONS_00046799 TCONS_00048752 TCONS_00206255 TCONS_00229178 TCONS_00229179 TCONS_00037640 TCONS_00116975 TCONS_00233406 TCONS_00118116 TCONS_00057018 TCONS_00025022 TCONS_00243110 TCONS_00057884 TCONS_00122090 TCONS_00002708 TCONS_00118479 TCONS_00120346 TCONS_00097333 TCONS_00087961 TCONS_00091391 TCONS_00176835 TCONS_00116161 TCONS_00132961 TCONS_00098489 TCONS_00207792 TCONS_00066431 TCONS_00252994 TCONS_00149464 TCONS_00218367 TCONS_00039279 TCONS_00100335 TCONS_00103962 56 XLOC_014218 XLOC_095274 XLOC_131927 XLOC_124364 XLOC_059580 XLOC_133453 XLOC_143032 XLOC_084615 XLOC_009947 XLOC_080770 XLOC_120945 XLOC_084614 XLOC_009409 XLOC_138675 XLOC_090260 XLOC_124865 XLOC_123050 XLOC_059539 XLOC_080930 XLOC_118400 XLOC_014641 XLOC_066262 XLOC_153981 XLOC_012846 XLOC_102322 XLOC_133562 XLOC_153944 XLOC_034625 XLOC_001575 XLOC_026938 XLOC_028883 XLOC_021470 XLOC_071141 XLOC_142888 XLOC_072282 XLOC_034820 XLOC_149773 XLOC_035681 XLOC_073646 XLOC_000664 XLOC_072637 XLOC_073143 XLOC_058222 XLOC_052749 XLOC_056166 XLOC_106609 XLOC_070330 XLOC_058734 XLOC_126307 XLOC_041144 XLOC_155935 XLOC_091340 XLOC_131688 XLOC_023097 XLOC_060578 XLOC_062257 Coding TCONS_00196654 XLOC_118400 Coding Coding PNPLA3 5:114959864-115014122 = TSS146286 8151 1 TCONS_00196654_3 531 0.568151147098516 13 0.850010136940856 5.89876291415044e-05 3.15153418752854e-05 3.29130043297627e-05 2.59624223173378e-05 2.20213274024594e-05 1.4496162216887e-06 9.48251118053323e-05 5.15896206190356e-06 5.54760148107161e-05 0.000235938474950753 0.00019441326777349 8.9349876479414e-05 7.67343864975346e-06 3.61392880773479e-05 3.63228777626609e-05 0.00744770511677906 0.00251913245768283 0.00257607319979578 4.42586817272491e-06 1.86109887723752e-05 3.89347427037933e-06 0.00220176912508276 0.00197643567127696 0.00261654031494228 1.4581504266532e-05 3.01650521480806e-05 2.37076584200379e-05 0.000388194564081781 0.000566336010450564 0.00064585302379113 XM_002687974.3 PNPLA3 PREDICTED: Bos taurus patatin-like phospholipase domain containing 3 (PNPLA3), mRNA. 0.0 3041 100.00 0.206723101459944 XM_005261754.1 PNPLA3 PREDICTED: Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), transcript variant X1, mRNA. 0.0 686 73.55 0.133480554533186 TCONS_00196654_3 sp|Q9NST1|PLPL3_HUMAN PLPL3_HUMAN Patatin-like phospholipase domain-containing protein 3; 2e-148 439 57.81 0.704331450094162 1 coding 0 0 1 1 -0.0266304558446969 0.849327696487349 0.0012879508776763 0.980163879338 ATGGCTGGCACCAAGGTGGGCTTGGCTGAAGGCTGTGGGGACTGGAGCCAGCTAGGGTGGCAATTGGAGGTGGAGTCATCGCTTCACAAGCCAGACCCTCCTGTTGTGAACATCAGCCTGAGGGAAGTGGTCACCTCCAGCACGGACCTGTCCTCACGTTGCTGCTCCACCCTCTGCCTTGTCCCGGAGGAGCTTGCCCTGCCATGGGGCTGGCACCTGATGTTCCAGAGCAAGGCTGGGCCTGCGCTGGGCACTGGGGACAAGATGTCCCAGCTCTGGAGCCTCGCCTCCTGGATGACATTTGGGGCCCGTGGGAGCCCCTCCACGCCCGAACCTGGGAACAGCCACTTGCATTACATCGCTTCAGGCACCTGGCCCTTCGGGAGAGACATGCTGATCGACTTCAGCGGTATTCTGCTCCATCTCATTGCTGTCATCGTACTCAACAACTGCCTCCAGCATGACCAGACGTTGCAGATCCTCATGGACCTCACCCGGAGCGCCAGAAGCCAGAAATTCGGGATCGTCCACCCAGGCTTCAGTTTGAGCAAGCACATCCGAGACGGTCTCCAGAGACACCTCCCTGACAACGTCCACCAGCTTGTCTCGGGCAAGATGGTCATCTCGCTTACCAGAGTGTCGGACGGAAAAAACGTGCTGGTGTCGGATTTTCATTCCAAAGACGAAGTCGTGGACGCCTTGTGTTGTTCCTCCTACGTCCCTTTCATCTGTGGCTGGATCCCCCCTTCCTTCAGAGGCGTGCGATATGTGGATGGAGGAATAAGTGATAACATACCCTTTGTTGATACCAAAAGGACCATCACTGTGTCCCCCTTCTATGGGGAGAGCGACATCTGCCCCAAAGTCAAGTCCACGTTCTTTCTTAACGAAGGATTCACCAAGCTCAATATGCAGTTCTGCACAGAGAACCTCTACCTGATGTTCCAGTCGCTGTTCCCACCAGATGTCAAGGTGCTTGGAGAGCTATGCCTTCAAGGATATGTGGACGCGCTCAGGTTCTTGGAGAAGAATGGCATCCGTGATGGGCCCCATCCGTGCCTGAGCGCGCCCCCCGCAGAGTCGGAGCCCAGGAGCCTGGAGCCTTTTCTGGGTGTGGCCCCCAGGGAGGCGGGGCCCAAGCCAGTGGAGCTGCTGGACCACTTGCATCTCAGCATGCTGACCTGGGACGAGAGCGTCCTGGAGACCCAGTCGCCCGAGCTCAGCATGGCACTGAGGAAGGCAGTCAGAAACCCAGATGGGTACAGAAACAGGATTTGCAACTTCTTACCAGTTAAGATCATGTCCTACGTGATGCTGCCCTGTACGCTGCCCGTGGAGTCTGCCATCGCTGTGGTCCAGAGACTGGTGACGTGGCTTCCAGACATGCCCAGCGACATCCAGTGGCTGTGGTCGGCCACCTCCCACGTGTGTTCTCAAGCCATGGTGCGTCTGCTCCCCGCTTCCAGATCCCAAATCCCAGCAAGCAGCCAACGGCCTTCCTCCACAAACCCGGACACTGTGGGCGTCGCTGGGCTCTCTGCTCCTCCGAGGACCTGGACACGCACCCTGTGGATGTCCTGCAGAGGCCAGAGCTGACAACTATGATGTCCGCAGAATGACCTGTGTGCTGAGTTTGTAGTGTCCTGAAACCAAAGGCAATCTTTCTAACAAAAAGCTAGGAAGCTACTCTTGGTGTGCGCGGTGGGTGCAGAGCTCAAGCATATCCAGGATATGAGTCTCTAAATATCGTTGGCTCGGTTGGGAAACTGCACAAGGGAGCCCGGCGTGGGGGCATCTGTGGCTGACTCCTCACCCTCTCAGCTGCCCCAGGGCACGTTCCTAGGGTGACTGGTGTTTGGATCAGGGACGTTGTGGCGGGGAGCTGGGCTGCCCTTTGTGCAGTCACAGTGGTTGGGGGGAAGGACTGTGGTCCCATCTCTCCATAGAGAAAGCAGCCAGTGTCGGGGAGGTGGGGTGCCATCCTCCCAAGGACACCCCTGGTTTCAGGGGGCATTCCGAGGTGGTAACTTACGTGAACTCTGGTACATCTTTCTGCTGCTGCTACTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACTAGGCTCTTCTGTCCCTGGATTCTCCAGGCAAGAATACTGGAATGTGCCGGGGTCCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACAGCGTAGGCGAAGATCAGGAAACAACTGCTTAATTAAACGTTAATTAAGGATATAAGGAGTAATAGAATAAGGATAGTTCAGTAGGAAATTCAGTGAAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTGAGAGAAAGAACGACATGGGGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAATAGTTTTTATACCTTAAGTTATGGATAATGGGGGAAGGGGTGGAGTCATGCAAGGACAGCAGCTCCTGGTCCTAAATGAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAAAAACTTATTTTTCTCTAAAGGTGATTGGTCAGGAGCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGTCACAGGAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTGTAACTACTCAAAAGAATCTGTGTTTAGACAGTTTAGAACATCTCCTGCCTCTCACAGTTGGGAGGCTTTGAACAATCACATGTGGCCAGAAAAACCTATTCAGGCAGGCTAGAGGATTTCCAAAGGAGTTTGTAGCTTAAACACTGTCACACCCAGGAATTATTAACTGGAGCTGCAAGCCAACTCCTCTCCCAGAGAGGTAGTGGGGGACAGCCCCCCGCAAAGTCAGAGGTGCAGGTGAAGGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATGGGGGACTCCTGAGGCTCAATCCCGCCTTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCATGGGCGGAGTTCCTCACGCTGGCTCCTGGCAGTGATAGAATTCCAGTTGAGCTATTCCAGATCCTGAAAGATGATGCTGTGGAAAGTGCTGCACTCAATATGCAATATGCCGGCTCCCGGCAGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAATCAGTCGTGCCCGACTCTTAGCGACCTCATGGACTGCAGCCTACCAGGATCCTCTGTCCATGGGATTTTCCAGGCAATAGTACTTACCTATCCTAAATATTTGGTGGAGTTATATTAAACATAACTCTCAGCAGGCACTGAGAGAGAGCATCAGAGGGCAGACAGATGGAAACCACAATCACAGACAACAGGCCAATCTGATCAAACGGACCACCCAAGACGGACGGGTCATGGTGGAGAGGTCTGACGGAATGTGGACGACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCTTGAACAGCATGAAAAGCCAAAAAGATAGGACACTGAAAGATGAACCCCCCAGGTTGGTAGGTCGCTGATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAAATGAAGTGATGGGGCCAAAGCAAAAACACCACCCAGTTGTGGATGGGACTGGTGACAGAAGCAAGGTCCGATGCTGGAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAGGAGATGACAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTCAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATAGCTTGGTAATCCAAGCCTATGTCCCAACCAGTAACAGTGAAGAAGCTGAAGTCGAACAATTCTATGAAGACCTACAAGACCTTCTAGAACTAACACCCCAAAATGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGCCAAAAGCTAATAGAGTTCTGCTAAGAGAACACACTGGTCATAGCAAACACTCTCTTCCAACAACACAAGAGAAGATTCTACACATAGACATCACCAGATGGTCAACACTGAAATCAGATTGATTCTATTCTTTGAAGCCAAAGATGGAGAAGGTATATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTCAAGAAAGTGGAGAAAACCATTCAGATATGACCTAAATCAAATCCCTTATGACTATACAGTGGAAGTGAGAAATAGATTTAAGGGACTAGATGTGATAGAGTGCCTGATGAACTATGGACGCAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATACAAAAAAGCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAACTGAAGTGAAAAGCAGAGGAGAAAAGGAAAGATATAAGCATCTGAATGCAGAGTTCCAAAGAATAGCACAGAGAGATAAGAAAACCTTCCTCAGAGATCATGCAAAGAAATAGAGGAAAACGATAGAATGGGAAAGACGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAATCTTCATGACCCAGATAATCACGATGGTGTGATCACTGACCTATAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTACGAACAAAGCTAGTGGAGGTGATAGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACCCAATATGCCAGCAAATTTGGAACACTCAGCAGTGGCCACAGGACTGGAAAGGTTCAGTTTTCACTCCAATCCCAAAGAAGAGCAATGCAAAGAATGCTCAAGCAAACCACACAGTTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCATGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAATATTCACTGGATCATGGAAAAAGCAAGAGAATTCCAGAAAAACATCTATTTCTGCTTTCTTGACTACGCCAAAGCCATTGACTGTGTGGATCACAATCAACTGTGGAAAATTCTGGAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCCGTATGCAGTTCAGGAAGCAATAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTACTTATTTAACTTATATGCAGAATACATCATGAAAAACGCTGGGCTGGAGGAAGCACAAGGTGGAATCAAGATTGCCAGGAGAAATATCAATAACTTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGGTCCCATCACTTCATTGCAAATACATGGGGAAATAGTGACTGACTTTATTCTTCTGGGCTTCAAAATCACTGCAGAATGGTGACTGCAGCCACCATCTGAAATTAAAAGATGAAATTCAAAGGTGCATACTCCTCGGAAGGAAAGTTATAACCAACCTAGACAGGATATTATAAAGCACAGAGACATTACTTTGCCAACAGAGGTTCATCTAGTCAAGACTATGGTTTTTCCAGTGGTCATGTGTGGATGTGAGAGTTAGAATATAAAGAATGCTGAGCACAGAAGAATTGATGCTTTTGAACTGTCCTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATCTATCCAGTCCATCCTAAAGGAGATCAGTCCTGAATTTTCATTGTAAGGACTAATGTTGAAGCTGAAACTCCCAATACTTTGGCCACCTGATGTGAAGAGTTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAAAAGTGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTAATTGACAGAGGCCTACATGCTACAGTTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTTATATTAAACAAAGGATTCTTAAAATCTCTTGAATTATCTATTATGAGGATCAAGAAAACATTCAGAGAATAAGTCTTGAAAATAGAAATCCAGTGCATAAGACAGTCACCCTGGCACCTGCCCCCGCACCCCTCCCCCGCGAGCTCTAATGGAGACGAGCAGGAGGCAGGCACGCACCGTCTCTCCAGGGTGGTAATCTGTTGGCAGGCACAGATTACATGGGCCCACTGCCCGTGTAATATGACCCAAGGAGCAATGTGGCGTGCGTTTTGCTTATTTATGCATTTGAGGATACCAAAAAGGAAAGGAACAATCAGCTCAAATCCTACTTCTGGGCGTGCAAAGTCACAGCTCTCACCCACATCGTGTAGGTGTCCTGGAGCCGAAGAACCAGCAGGGCCAGACAGAGCACCGCACCGTGAGGGCAGCAGGCAGGGACTGCCTGTGAAAACACAGGGTCGGCTCGCAGTGCAGGGAAGTGCCCCATGGGGGCTCCTGGCTGGCTCCTCACATTTCTGGGGTCTCCTGTGCTGGTAACCCTCACTTCCCGAGTGAGGCAAGGCTGAGTGGTGGGCTCTCTGGCCACCTGGGCCCCAGGTCAAAGCACTGTCCCCTTGCTGAGCTGACCTGGACTCCTGGTGACACCCTCACACCTTCCCTGAGCCCGGTGCTCGGGGTCCCAGTGGCCTTCTCTGCCAGAACCATCGCCCGGGTCTTAACACATGCAACCCCACCTTAGCAGCATCTTACAGTAACCAAGACACTTTCATTTATATAGTATTCTCTGCACTGGTTCTGACGTCATCGTAGGGAAAAAGATGTGTTAAGATAGGATTACATGGGACTTATTTTCTTACTGTCTGTGATTATTCCATCTTCTTACGATCAGCATGTGTTTTATTAATTCGTTTCAAACGTGCAGTAACACGAGGAAGTGTATTACTGTTTCTTAGGAATATCCCGGGTTCCGCCTCACTGGTGCCTTGTCTCCTCATTGGCTGACCCAGGCCTCCCCCCGACATCCTCACCGCCCCCCAGGCCCTCACCTCTCCAGCACTGCGGGTTTCTCATCAGCGTGTAAAACATTCTCAAGTTTCTCCCACCTTGTCAAATATTGATGATCCGCTCGGTATGCGGGGATGCTCCAGTATCAGGAATCATTGGTGTGCAGTGTGATTCATGCCAGGGAGCAACCGTCTGTTTGGTAAACAGATAGCAGAGCCTGCTGAGAAGCATGAGCCCAGTCTTGCTAAGGAAATAAAATGTGTGTGTAGAGTGGACACTGAAAGACTGTTTGCCCGGTTACCGACGGTGGTTACCATGATGCCGTCCCCTGTAATTACATTTTATATTAAATTTCTGCGTTCATCACGATATAATTCATAACAA EMBV3_22813 AGGATGGCTCTCTTTGCTGGCGGCAGACTGTATCGTGAAGAGCGCTTCCGTCTGATCAGT Variant GeneID:508729|TMED4:XM_002686889:96_cdna 712^858 2 EMBV3_15565 GeneID:508729 4 GENE TMED4 NULL transmembrane emp24 protein transport domain containing 4 EMBV3_12615 CTTTCACCCGGACAGTCACCAGTCGGAGCAGACGCTGTGTGTTGTCTGCTTCAGTGATTT Gene GeneID:531968|RNF44:XM_002689003:35_cdna UTR3_Alt 2 NULL GeneID:531968 7 GENE RNF44 NULL ring finger protein 44 EMBV3_03126 GAGCAACTGTTAAGTGCTCTGGTGATGGGAGCTACAGAAAGCCTCCAGGGAGTTTACTGA Variant GeneID:507597|NPL:NM_001045978:17_cdna 667^884 2 EMBV3_10565 GeneID:507597 16 GENE NPL MGC137867 N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) EMBV3_17562 AGGGCAGCACTGTTGACAATATCCAAGACAGAGCATCAACCAGAGTGTCCATCAATAGAG Gene BVT0101_046397 + 0 NULL GK000018.2:50934014-51077479 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086688 1 XLOC_052219 NonCoding TCONS_00086688 XLOC_052219 NonCoding NonCoding LOC100336877 18:50974948-51110840 o TSS64470 2959 2 TCONS_00086688_10 95 0.806353497803312 3 0.978247271710415 0.000532065862619571 0.000645257082257683 0.000280562890640421 0.000404129286235535 0.000440710995052164 0.000151202004322327 0.000456780178948296 0.000227088594480339 0.00100448102827686 2.07335391865127e-05 8.95904916310367e-05 1.81261626993249e-06 7.6814721819188e-05 0.000183434001593359 0.000132399506132247 0 0 0 0.000232849080955125 0.000210728080661378 3.3619168392297e-05 0 7.75098030069203e-07 0 0.000273422350459952 8.45810248178374e-05 0.000210202471528381 8.11522199047073e-06 4.10155799581235e-07 1.57837165527007e-06 XR_239764.1 LOC100848447 PREDICTED: Bos taurus uncharacterized LOC100848447 (LOC100848447), 2e-65 255 86.30 0.0723217303142954 0 noncoding 0 0 0 0 0.00874727432720795 0.935997481819533 0.0415253648937357 0.503464471608277 GCAGATCGTGGGGTTTCCAGTGGGCTTTATTGAGCAAAATTCAAGTGAGAGATTTTTTTTTTTTTTTTTTGCTAACATAAAAGGTTTTATGGGATTTATTGAAGGTACCATGTAAAACCTAGCTTTCTGGAGTCCCTGGGAATTTGCAGGGCAATTAATTCAGCTGGATCTAGAGAGGAACGGAAGACAGGATGGAAGTGAGCTGCTGAAAGTCTTAGGTGCCTGACGGAAGATTGTCCTCCCACGTGTCCCTACCGGTCGATTTCAAAATCATGAAAGCTTGCAGAAATGAAAATCAAAACTACAATCACATATCAGTTCACACCGGTAAGAATGGCCTTTGTCAAAAAGTCTACAAACAAACGGTGGCGAGGTTGTGGAGAAAAGGGACCCCTCCTGTACTGATGCCGGCATTGTTAAATTGTTAACAGTCAGTAGGCAGGATAGCGTGGAAGTTCCTTAAATAGCGAAAAGAGAATGACATTACCACTCTGCCTAACCTCATAGAGAAAAAGGAATTCCAGATTGATTGACGATCTCATTGGAGGGGTGATTACTCTCTACCTCTTGAGAAAAATACATGCAGAACGCACTTTGACATAAATCACAGCCAGTTATTGCTGGATCCACCTTTGAGAGTAATGAGACATAAAATGGAAGTGAACAGAAGGGACCTCATCGACCTTAAGGGTTTGCACAGCAAGGGAAATCCTAAATGACAGAAAAAGTCCATCTTCAGATTGGGAAAAGTAAAGGTTTCCAAATGAGGATACCCACAAGAAATTCATCTCCAACACATGCAAACAGCTTATGTAGCTCAACATCAAAAAACCAAACAACCCAATAGAAAAATGGGCCTAAATGGACACTCCTCCAAAAAGGCATCCAGATGGCCAGAGAGCATGTGAAAAGGGGCTCAGGATCCCTGTTAAAGAGATGCCGACCCAAACTGCACCGAGGAATCTTCTCAAACCTGTCAGATGGGCCCTTTTCAAAAAGTCTGCAAACAATAGTGGAGAGGGTTTGAAGAAAAGCTAACTCTTTGATACAGATGCTGGGAATGTAAATTGTTAACAGTCAGAATGGAGAACAGGGAGAAGGTTCCTTAAACAAGAGAAAAGTGAGTGAAATTACAACACTCTCAAAGCCCATGCAGAAAAAGAAACTCCAAATTGGTTAAAGAGCTAAATAGAGGGACGATTACCCTAAACCTCTTGAGGAATATACAGGTAGAACATGCCTTGACATAAATTGCAGCAAGTTCTTTTTGCATCAATTCTCAGAATAATGAAAAAAAAATTTAAACTCAACAAAAGAGACCTCATTAACCTCAAAACCTTTGGCACAGCAAGGAAAATACTAAACAAAGGGGGAGAAAAAAACCCTCAAAATGGGGAAAAAAAAGTTTGCAACTGAATTTAAAAACGGAATGCACCTCCAAAACATTCAAACAGCAGCTCAATATCAAGAAAATAATCAATTCAATTAAAAAAAAAAAAAACAAAAACAGGCCAAAGATCCAAATGAACATTTGTTCAAAGAAGGTATCCAGATGGCCATAAAGCACCGGAAAAGATGCCCGGGATCACTGTTAGAAAAATGCCAATCAAAACTGCAGTTAGGTATCAGCTCACACGGCTCAGGATGGTCATCTTCCAAAAGATCTACAAAGAATTAAATGCTGCTGAGGAGCATCTGGCAAGGGGAACAGAGCATCCTCTACTCTGTGGGGTGGGGGTGTACATGGGTGGGTGCAGCCATGAAGGAAAACCATGGAGATTCCTTAAAACACTAAATACAGAATTAACATATGATAAGGCAAGCCCGCCCCTTGCCCTAGATCTGGAGAAAATCATAAAATGATTTTTAAATCATTTAAAATGATTTGTGCACCCCAATTTTCAGGGCAGCACTGTTGACAATATCCAAGACAGAGCATCAACCAGAGTGTCCATCAATAGAGAAATGAAGAGACTCTGGAATACACTCGGCTATCCCAGAGAATGAAAAAATGCCATTGTCAGGAGCATGGAGGGACTGAGGTTTATCATATTGAGTGAAGTCTGAGAGGGAAAGAAATATATTACTGATGGGTACAATCTATAAATTCACACACATGAACTAATTTATAAACAGAAACAGACTCACAGACTTAGAAAACCAACTTATGATTATTTTCTAAAAAAAGGTAGGGGAAGGGGAACATTGTGAGTTTAGGACTGACATACACACACTACTTACTACCAGATATAATCCTAAAGGACCTGCTGTTCGCACAAGGAAGTCTGCGGAGCACACAGAAAGAACCTATTTGGGGAAAGCCCCCTTAATAGAATCGATATATGTCTGTGTATGACTGAATCAAGTTCTTGTAAACCTAAAACAACACAAGAACAGAAATCAACTCTACTCCAATAGAAAGTAAAAACTGAAAGTGTTAGTTGTTCAGCCGTGTCTGACTCTTTGGGATCCCATGGACTGTCGCCCGCCAAGCTCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGAAGGGGGTTGCCATTCTCTTCTCCAGGGATCTTCCTGACCCAGGGATTGAACTCCGGTCTCCAGCATTGCAGGCAGATTCATTACTTTCTGAGCCACCAGGGAAGCCCAATAGAAAATTAAAATTAGCCAGAAAACAAAAAACAAAAAACAAAAAAACCCTAAAAACAACCCAGTGTGGAGCATGAAGAAATGCTGCCGCCTTGTGGCCGCTTTTGGTAACAACAATGGAAACCTCTGTGCTAATGGGTACTTAAAAGTCAGTCACCAAGCCTGAGGGGATGTGGGAAAAAACACCTGTCCTTAAAAATGTCCTTGGGGAGGTTCTGGAAAAAGATTTCAGATGAGGGCAGATGGTCAAGAAGACAATCTCGAGAGATCATTTTTGCTCACAGTGTTGTTTCTTTTTAAACACACGAAAAACTATCAAC TCONS_00086683 TCONS_00086684 s 5' 22259 TCONS_00086682 s 5' 0 EMBV3_00858 GAAGCATCTTTGTTAAGTATTTTTCATGTTGACCCATGGCTGGGATGCCTGGTCACAGGC Gene GeneID:404141|INGX:XM_002698650:96_cdna UTR3_Alt 1 NULL GeneID:404141 27 GENE INGX INGX inhibitor of growth family, X-linked, pseudogene EMBV3_10489 GTGCCTCAGAAAACTGGAGGAAGAACTGTAGGAACCTGAGCTTTACGGGCTGGATCAGGA Gene BVT0102_069786 + 0 NULL GK000022.2:22906916-23229271 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126496 TCONS_00126492 TCONS_00126486 TCONS_00126490 TCONS_00126497 TCONS_00126498 TCONS_00126487 TCONS_00126491 TCONS_00126489 TCONS_00126494 TCONS_00126493 TCONS_00126488 TCONS_00126495 1 XLOC_077446 Coding TCONS_00126487 XLOC_077446 NonCoding Coding LOC100847866 22:22842223-23182833 j TSS94844 649 1 TCONS_00126487_1 77 0.183359013867488 6 0.99811220490357 0.0115340212223013 0.00361196380056199 0.00590404447667816 0.008192252377556 0.0133576312597118 0.00586750005934895 0.00524410281483614 0.00512241916379587 0.00375965698570443 1.24623709692179e-06 4.97827167947482e-05 0.000411942486233205 0.000849010457673247 0.00312622811670417 0.003625026569124 3.5116686932152e-106 0.000100013759802714 4.18597463598445e-292 0.00673457313681217 0.0109249816511108 0.00346367592178406 1.01726725397349e-167 0 6.01733763573529e-152 0.00674281471221901 0.00567621609397196 0.00647116278633821 3.983004277202e-12 2.97267446443711e-40 1.10476041993465e-42 XM_005222644.1 CRBN PREDICTED: Bos taurus cereblon (CRBN), transcript variant X2, mRNA. 0.0 899 100.00 0.765793528505393 0 noncoding 1 1 1 1 0.00671096967705279 0.947380696686021 0.0338535769014359 0.680610145286318 ATGGATCAAAGACTTAAACGTAAGACCTACAGTTATACAACTGTCAGAAGAAAGGATAGGGCAAAAGTTAGGCATGCCCGTGGATTTGGTAAAGACGGTGGATATGACACTAGAGGCACAACGCACACTCGCGAGAAGATTCGCGAAGAGGGTCCTGCGGAAGGATTAAATCCAGGCTGTCTTCTCCGTGCCTCAGAGTTGCGGTGGACCCCAGAATCGAAAGAGAGCTTGTGAACATTGCAAAATATTCTCTGCACAAGGGGAGGGACTGTGCAATTTTGTCAAGATGATGCCGCAACAATGAGATGGAGCATCTTACCTCCTGTTGTTAATTACCTGGCATAGTTCACAGAGCTGATCAACTTTGCATGGTGTGTCCCACAGAGGAAGAGAGGATGGTGGCATTAGACACATGCAGCCAGAACTCTGGGCCAGGGCTCTAGGAATCTAGACAGCCACAAGGACCAGAGAGCCTGCCTTCAATCTGGATTCAAGCAGAGACCTGGAGAAAAAAGACGTGGAGTCTTAGCAGCACGAATTTCCTGATCCAGCCCGTAAAGCTCAGGTTCCTACAGTTCTTCCTCCAGTTTTCTGAGGCACCCCGCGTCTCATCCAGCTGTTTTAAGATTTCTTTCACAAGACAAGGGTG EMBV3_27738 TCTGGATTTCACAGGGAGGGGGACACAGCCGAAGATGACTTTCCTTCTTCTCCAGGGAAT Gene GeneID:505851|LOC505851:XR_084050:49_cdna Constitutive 0 NULL GeneID:505851 23 PSEUDO LOC505851 NULL similar to Wilms tumor 1 associated protein EMBV3_27515 CTCCACACCGCTAAGCAGAGGCAGTTTCACTAAGACAGATGGAAACAAAGAAATGGGACC Gene BVV0102_359521 + 0 NULL GK000026.2:14126070-14268979 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43636 ATAGCCGACCTACAGCTGATAGACTTTGAGGATTTACTAACCAGACATAAAGTGTTGGTA Variant GeneID:519724|CAB39L:XM_002691786:399_cdna 635^922 5 EMBV3_34228 GeneID:519724 12 GENE CAB39L NULL calcium binding protein 39-like EMBV3_11368 GGACTACCCATGTCCCTAAAAACGCAGTCCCCAGAAGTCCTGACATCCATCCTTTCCCAA Gene GeneID:519280|GPX6:NM_001163142:22_cdna UTR3_Alt 1 NULL GeneID:519280 1 GENE GPX6 NULL glutathione peroxidase 6 EMBV3_00147 TGTCACGGACACTTAAGCAAAACCAAAGATTTCCTCGAAGCAACTTTCAATCAGTCCCAG Gene GeneID:519857|PRDM6:NM_001103255:14_cdna Constitutive 2 NULL GeneID:519857 7 GENE PRDM6 MGC148761 PR domain containing 6 EMBV3_42042 CCTCTGATGCTCATCCCTGCCCCCAAATAGCACGCAAGCTTGTTAATCTCAGCTAGAACA Gene BVV0102_037632 + 0 NULL GK000008.2:101402480-101431980 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226449 TCONS_00226443 TCONS_00226440 TCONS_00226448 TCONS_00226446 TCONS_00226444 TCONS_00226439 TCONS_00226447 1 XLOC_138000 Coding TCONS_00226440 XLOC_138000 Coding Coding PALM2 8:101018353-101406484 j TSS169300 7173 1 TCONS_00226440_3 996 9 0.98154226676629 7.92764014939805e-05 0.00017900048474628 0.000590994340208736 1.4836038571219e-14 5.94980749397962e-12 2.9885144771871e-09 0.000180256688078447 0.000113494354369716 0.000417346012772352 9.42726121036012e-08 0.000106149231190121 5.44952689993255e-05 4.1013476998944e-05 0.000102433040936526 6.67358608831559e-06 0.00068338915402812 1.03860913721501e-09 5.21275337604283e-34 3.29374075383264e-23 8.53703013482512e-05 0.000216859711637171 1.75700248854965e-60 0.000306356128404052 0.000851473450913773 0.00123470059079163 4.34312317120723e-15 0.00024787301738068 7.74858761876434e-05 6.83779185753117e-05 0.000200837476039022 XM_005210503.1 AKAP2 PREDICTED: Bos taurus A kinase (PRKA) anchor protein 2 (AKAP2), 0.0 7128 100.00 0.550815558343789 NM_007203.4 PALM2-AKAP2 Homo sapiens PALM2-AKAP2 readthrough (PALM2-AKAP2), transcript 0.0 3600 85.85 0.427854454203262 TCONS_00226440_3 sp|Q9Y2D5|AKAP2_HUMAN AKAP2_HUMAN A-kinase anchor protein 2; 0.0 1244 86.10 0.766064257028112 0 coding 1 1 1 1 -0.0850221594772354 0.503312894877115 0.0657572942196849 0.191471874119901 CGGGGTGCCCATCAATTTCCTCGGGTGACTACAGCGTGTGTTTTGTTTTTCTTTCTTCTTTCCCTCGCTGTGTGCCCTTCTCCAGGATGGCAGAGGCGGAATTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAAAAGAAAGAGGCAGACGGAGATAGAAGGCAAGCGCCAAGAGCTGGACGAGCAGATACTTCTGCTGCAGCATTCCAAGTCTAAAGTACTTCGAGAAAAATGGCTGCTGCAGGGCATACCTGCTGGAACCGCGGAAGAAGAGGAAGCCAGGAGGCGGCAGTCTGAGGAGGATGAGTTCAGAGTCAAACAGCTTGAAGATAACATTCAGAGGCTGGAGCAGGAAATACAAGCCCTGGAAAGTGAAGAGTCCCAAATATCTGCCAAAGAGCAAATCATCCTAGAGAAGCTAAAGGAAACAGAAAAATCCTTCAAGGACTTTCAGAAGAGCTTCTCCAGTGCAGATGGAGATGCAGTAAATCACATTTCCTCCCAGCTCCCCGACCTGCCAATCCTCTGTTCACGAACAGCAGAACCATCACCTGAGCAGGACGGAACCAGCAGAGCAGCTGGAGTTGGGTGGGAGAGTGTGCTGCTAACACGAGATGATATAACCTCAGAGGCCATAGCATCATCCAGCGCAGACATGACTGTCAAGAAGCCTCCCGAGCTTTCTGAGGATGATACCCGGCTAAAACACGAGAGAGACAACTGTAGTGCCAAAGCCCTGGAATCTATCACCAGCTCTCTTCCCCCAGATCACAAGAACATGGAAATTGAGGTCTCTGTTGCAGAATGTAAGAGTGTTACCGGAATCACCTCGACTCCACATTCCATGGACCACCCCTCCCCTTTCTACTCAACCCCCCACAATGGCCTCCTTGCTGATCACCACGAATCTCTGGATAATGACGTGGCCAGAGAGATCCGATATCTAGACGAGGTGCTGGAGGCCAACTGCTGTGATTCTGCTGTGGACGGAACCTACAACGGCACATCCTCCCCGGAGCCTGGAGCAGCCATCTTGGCCGGAAGCCCAAGTCCGCCCACCCCCGCGGCTGTCCAGCCGGAAGTCACCGAGACGGCAGCTGGCAGACAGGCTCCTCCGCACCTGGAGCTCCATCAAAGCGACTCTGACACCATGGCCGAGGGTAGAAGAGCCAACGGCCACCCCCCTGAGCAGCCCCGAGACATACTGGGGGACAGCCTGCAGGTGCCCGTGAGCCCCAGCTCCTCCACCAGCTCACGGTGCTCCTCCCGGGACGGGGAGGTAACGCTCACCACGCTCAAGAAGGAAGCCAAGTTCGAGCTGCGTGCCTTCCACGAGGACAAGAAGCCCTCCAAGCTCTTCGAGGACGACGAGAGTGAGAAAGAACAGTACCGTGTCAGGAAAGTGAGGCCTTCAGAAGAGATGCTGGAGCTGGAAAAGGAGAGGCGGGAACTCATCCGGAGTCAGGCCGTGAAGAAGAACCCTGGTATCGCCGCGAAATGGTGGAACCCTCCGCAGGAGAAGACCATCGAGGAGCAACTGGATGAGGAACATCTGGAGTCGCACAAAAAGTACAAGGAGCGCAAGGAGAGGAGGGCGCAGCAGGAGCAACTGCTGATGCAACAGCAGCAGCAGCAGCCCCCACCACAGCTCTGCACGGCCCCCGCACCCTCACGGGAGCATCCCTCTGTGACTGACCACCCAAAGGAGGACATCGTCACGGAGCAGATAGACTTCTCCGCGGCGCGCAAACAGTTCCAGCAGATGGAGAATTCCAGGCAGACAGTGGCCAGGGGCCAGAGTACACCCAGGCTCTTCTCCATCAAGCCCTTCTACAAACCTCTGGGGTCCATCAACTCAGACAAGACACTGACCATCTCCAGACCAGCTTCTGTCGGGGCACCTCCTGAAGACTCCTCAGCAGCCAAGGGGCAGAAAGCCCACTGTGCCCCAGAGAGTCAGTCTTCTGGAGGAGGGGGCCAGGGCAGCACAGCTCCCCAGGGAAAGGAAGGGCCGTACAGTGAGCCCTCTAAACGTGGGCCCTTATCCAAACTCTGGGCAGAGGATGGTGAGTTCACGAGTGCTCGGGCCGTCCTCACCGTGGTCAAGGATGACGACCCTGGGATCTTGGATCAGTTTTCAAGGTCAGTCAATGTCTCTTTGACTCAAGAGGAGCTGGACTCTGGTTTGGATGAGCTGTCGGTGAGATCCCAGGATACCACCGTCCTGGAGACCCTGTCCAATGACTTCAGCATGGACAATATCAGCGACAGTGGGGCCTCCAATGAGACAACCAATGCCCTGCAGGAGAATTCACTGGCCGATTTTTCTCTGCCCCAGACTCCCCAGACTGACAACCCCTCAGAGGGCCGAGGAGAAGGGGTCTCCAAGTCATTCAGTGATCATGGTTTCTATTCCCCTTTGTCCACACTGGGAGACTCTGCGTCAGTTGATGACCCCTTGGAATATCAGGCTGGTCTCCTGGTGCAGAATGCCATTCAACAAGCCATCGCCGAGCAAATAGACAGAGCTGGGTCTGAAACCACCAAGGGTGGAGCAGAACAACAAGGACCTCAAGTAAGTCAAGAGAAAGCTGGCCCCAGGGCTCCCAGCTCAGAGAAGCCTCAGAGCATGTTTGAACCACCTCAGGTGTCCTCCCCTGTTCAAGAGAAAAGGGATGTATTGCCAAAGATTCTGTCTACTGAAGACAGGGTGCTCAGGGAAAGGGGGCCCTCCCAGCCACTGCCAGCGGTACAGCCCAGTGGCCCAATAAACATGGAGGAGACCAGGCCGGAAGGGAGCTACTTCAGCAAGTACTCGGAAGCGGCTGAGTTGAGAAGCACAGCCTCGCTCCTGGCCACTCAAGAGTCTGATGTAATGGTTGGGCCCTTCAAGCTGAGGTCCAGAAAGCAGCGGACTTTGTCCATGATTGAAGAAGAGATCCGAGCAGCCCAGGAAAGGGAAGAGGAGCTGAAGCGGCAGAGGCAAGTCTTGCAGAGTACCCAGAGCCCCAAGGCAAAGAATGCCCCATCACTGCCCTCCCGAGCATCGTGCTACAAAACTGCTCCAGGTCCTTGAGGCCACACGGGTTAATCGAAGAAAGAGCGCATTGGCTTTGCGCTGGGAGGCGGGGATCTATGCCAACCAAGAGGAAGAAAACAATGAATAATCAACTTCCTTCCACCCAGGAAGCTTCTTTGGTGCTTGGGCTCCCAAGAAACCAAGAAATCAACAGTCAAAGCATTTTAATAGAATATTTATTAAAGTGCAAACGAACTCAGCAATCCTTATGCAGGCCAGAAGTTATAATCTACAGTGAAAAAGCAGTCCACCCACCAAACTCAAACTCCTGGGAGTCAAAAGGAAAAGGATTGTGTGTGTGTGTGTGTGTGTGACTCAAAAGGATCGCCTGGGTTTGGACCACAGTTGATCCAAAAGGACAAAGAAATTATGAGCAAACCGACATGGTTGCTCCAGGCAGAAGAGACCAGGCTGCCTGGGTGGTGAGGAAAACAGTGGAGATGTGGCCCTTTGGAGAATCTGAGAAGCTGGCGCCGTCCACCTGGCTGAGGGTACTTCCCTGCGCCTGCACCAGTTCCCACCCGTGACCACATCGCAGGTGGCGGACCAACTCCATTTACTCCAGCAGCCACAAAATAAGGTTTCTCTCCATTTGCCCAGAAGAGGCAACTCTCGTCCCATATCTCTTTCATTTAATTGTTTTTAATTAGGAGCCATGAATGATCACAATCCGTATTTTGAAGACAGGATTTCTTCCTGTTGCAAACACAATCTGTTCTACATTAGGAGGTTGAGGAAGTGGGGGCAGAAAGCCAAACCAAATAGATTATTTTACCTTTAGGGTCTTGTCTGCTTATGATACTGACTGAGCTACAGTTTATGAGAACACATTTTCACAATTCTGTTTCTTTATATGAAGACTATATTTAGGGGGCAACAACTATTTTTATGATGGGGTGGGGGAATCTATCCATGTATAAAACCTGTACACATTGAACAGCATGGTTCAAGAGGGGAGGGGTGTTTTTAGAATGGCAATAATCGAAACAAGGGCGAACTCTGCCTTGGAGAGGTAGATGAGAAATAAAGAGGTGTTTATAACTATATTTTATATATAAAGTGAACCTTCAAGGGAGTAGGAAGATGATAGATTATTTTGGATTAGTCAGGGAAAGGAAGCAGTAAAGAAAGCTCATGAAAGGTAGAGAATAAGGGAGGGAGAAAGAGTGGGAAAATGAGGAAGTAAGAGAGATTATTTTTGCTGAGCAACCAGTATTTTTCAGGATGATACAGAGAAAAATATAGAAGTTTAAGTGCAGGCTTAGGATCAGCTACAAATCCTAAAGATGGGTGTGTGTGTGTGCGCACGCACGCACGTGCCTATGTGTCCGCACACGCCTTTGTGTATTTTTGCAAAGCGCGTGAGTGCTCACGAGTAAGGGTGTGTGTGTGTGTGTGTGTGTGAGGAGTAAAATTCCAGAATGGTCATGGGACAAAGGTATCCACTTACTTCCTCCAAAGCTGTTTGCCAGCGTCAGGAGTGAGCGAGAATTTCTTTTTTATGAAAAGGATATAGAGGCTCCGAGCTGATACAGTATTTGTAATATTAAGTTGACCTAACATGGTATTTGCATGAGTCACAATGGCAAAGTTTTGAGCAGTTTTGTAATTTGACATTTAGGAAAGTTTCATATTTATTCTCATGCTTTGTATTCATGCTTAGTATAGGCTAAAGGATGCCAGCTTTACTCTTTTTGTCTTTTAAAGCAATATGATCAGGGCATTCAATCATGGAATGCCCTCAATTTCTGGATGAGAAATTTTTTAACTCTGGCCATGAGAAAAATACTGACCAGCATTCTTTTTTTTTTTGGTCCCCTTTGTTTTTTCTTTAAATTAGAGGATAATCACTTTACAATATTGTGCCCTTTGTTTTAAAACTGTGTTTTTTTAAAAAAAAGCAATAAGTAAGTTAGACCTCACTAAAATTCCTTTTTGTTTTTATATTATTCTGTCATAAGCGCTAATAGGTTATTCTGACAAGTAGCAGTTCCACAAAATTTGTATGTAGATGTCATGCACACTATCTTTGCTTCTTTTATTAGACTAATGTCGGCTTTAGGGGAAAGTTTATTCATAAACAAGTGGTGGACACAAAGTAGAAATGGAGCTGTCGGGTAACTTACAACTTTGAAACTGCCAAGGGAACCTGCAATTTGAAGCCAAATTCTACAGATGGGTAATTAGCGCCATCTTCAAATGGCTCACGGCCCTGAGCATTCCGAATGAAGAGTCAACAAAATGTGCTAACCACTGGAGATACGTGACAAATAAGATGCCTGCTGTTAGGAATTCTTTTTTCAAGTGGGAGAGGCTGGCACAGAGACAGACGTTCCCAGGAAAATGAGATGAGGAGTCCTGATCAGTGACAGGAGAGTACCCTGAGGATTTCCAGCATTGTTCCCAAGACAGGCATGGGAATGACCACTGATGCGACAGTAGCATCGTGTGGCCCAGGGACACAGAGGCTGCTCGGATGCCTGGAGAGCAAAGTGTTCTATGCTTCGTGATTTCTGGACTAACTCTGGATCTGGTCACGGCCATAGACTAGATACAGATGGACTCCCCATCTTTCGAAAGAGGAAACAATCCTCAGGACTTGCCTGAAGTGTTTGGTTCTGTTTTGAAGGAAAATGTGTACCCACCTTAAACCTCCATTTGAGAAGAGAATGGGCAGCTGAAAAGAAAGCTTAGAAGGCCACGCAATTCCTGCACTTGCTGTGGAGGCAGATAAATCGGTCTTTGACTACAGTTGATTGAACCAGACACATTGATTGCGTAGAGTTACAGAGTTGGGATCCTTTGGTCCGTGCTTTGAGTAGGCAACAAATGCAGAGTTTCCGTGACCCCCTCACAGTCACAAAGCCGTTTAACTGTGGCCCCCACATCTCCAGCCTTTGCTTGTTCCCTTCTGCTGCCTTCTGATGACTGCTGTTCCACTCAGTTACAACCCTGTTAAAATGTCCATTACAGTTCCCTTGGAAGAGCCAGGTTTTCTCTGCGCTCTTGAGTTTTTTTTACTCATTTAAGAAACATTGGGCCATGGCTTTGTACATATCACTATGCTAGGCTCTGGGATCCCAAATGAACCCCTTAAACCATGTGAAGATGCAGCAGACCTGGAGGAAAATCACTCCTGCCTCATCCATTGAGAGGAAGAGGCTTGTCCACACATCGGCCTCTGATGCTCATCCCTGCCCCCAAATAGCACGCAAGCTTGTTAATCTCAGCTAGAACAAATGTTTAGATTCCGTAGATATTAAAAGCTTTCCTGAAAGTATTCCATTCCACAGTGTTTATAGATGTCCACTTTCTTCCGGAACTGATTACCTACTGACATTCCTTGGCTTTCTCATCCAGAAATTATGGAAACAGGGTCTGTCAGTGGCAGGAGGCTGGGCTGTGTCCCGCGTGAAGGACACATGCAGTCTCCTTGCCTTTTTACACCTGTGCATGCTGCCCACCGTAGACAGTGATGTATAAACCGTATATAGCTCAGTGTCCACATATATACACAACACACACACACAGCATAACAAGGAACACTAAGACAGTGTTGACTCTTGTCTCTGAAGACAAATAATTAACATTTTTTCCAACTAAAGAATGGATGTCATTAAACTATGTATTGGAAAAAAAAATAATAACCTATGTGTTTAGAGATGGTGACTATATCCAGTTTTAGTGACAGAACCAATTTCCTGAATTTTAAGCATTCAGTGAGTGAGCTGCCAATTTTGATTTTGTGTTGCTCTTTACCCAAATGACATTTTTTTTTCCCTTTTTTGGAGGAGGGGGCAAAAAGCAGCAATACTGTGTTTGAAAATGATACTCTGGCTCTCCTGTGTATGTTAACCACTTCAATGTTATTATCCTGCTTTGGTTTTATAGTGATTGTGAGGCATTCAATGCAAGTATACAATTATTTTCTCATTAAAACCCAGTGTGTGTTGTGTTTTTATAAGTGATGGCCGCTTGTTTGACTGGGGTGGGGAGTTGGAGGACCGCACTGCCTGAGGGTGGCCAGTGCCCTTGCCTCTGATTCCACGGGGGAGCATTGCTTCTTGCATATTTGGAACCAAGAAAGCAACAC EMBV3_43491 TCTGCTTGTGACTGCCTTTGAGTATACCTGACTCATCCCCATAATGCCCTTCGGCTCAGC Gene BVT0102_067465 - 0 NULL GK000007.2:95600331-95638138 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08677 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06082 CCTGGTACCCTCAACTTCAAAGGAAAAAAGGAGTGATTCTAATGAAAGCCCAGATTTTAG Variant GeneID:508335|LOC508335:XM_002698944:41_cdna 118^324 1 EMBV3_20671 GeneID:508335 28 GENE LOC508335 NULL similar to Family with sequence similarity 35, member A EMBV3_09343 AGCGATTTCCCTTCAGTCACTCTACAAAGCAATAGCTCCATGAAAAAGGCGTGACCTTTG Gene BVV0102_086928 + 0 NULL GK000002.2:130339351-130370185 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104022 TCONS_00106859 TCONS_00106860 TCONS_00104021 TCONS_00106861 TCONS_00104025 TCONS_00104024 TCONS_00106863 TCONS_00106862 2 XLOC_062271 XLOC_062913 Coding TCONS_00104025 XLOC_062271 Coding Coding LUZP1 2:130339592-130370117 j TSS77120 8616 1 TCONS_00104025_6 1071 0.0833333333333333 3 0.71782859389333 0.000233337620095599 7.69652156118947e-08 3.14204762194474e-88 2.792578372937e-09 7.36978869380435e-38 4.68819959534713e-13 7.935497224971e-05 9.3151913663219e-07 6.46807155798179e-75 1.49129117893679e-10 9.43802349225855e-60 7.06146117344543e-11 1.86815582464228e-05 2.5514672417585e-53 5.97000164402243e-07 0.00512892911924085 0.00286758616379957 0.00290582400366165 2.08058466132603e-22 3.0203688600994e-12 1.23029114030218e-262 0.00205500801268049 0.000220720421844751 0.00291893463820039 4.1887528670659e-06 1.21596315010174e-13 7.06737482287622e-09 2.52116136596187e-07 3.45886395359284e-10 0.000416365883901719 XM_005203160.1 LUZP1 PREDICTED: Bos taurus leucine zipper protein 1 (LUZP1), transcript 0.0 1.312e+04 100.00 0.844359331476323 NM_033631.3 LUZP1 Homo sapiens leucine zipper protein 1 (LUZP1), transcript variant 0.0 4637 80.40 0.585190343546889 TCONS_00104025_6 sp|Q86V48|LUZP1_HUMAN LUZP1_HUMAN Leucine zipper protein 1; 0.0 1764 84.49 0.99906629318394 0 coding 0 0 0 0 -0.0530017357014266 0.739690288934164 0.0159448343006184 0.732131611514411 TTTAAAGCCAAGATCTGAAAGAAGTGAGAAACACACCCAAGGAATTACATGGGAGAAGAGCATTCCAGGCGGAGGGAAGAGCAGATGGAGAAGCCCTGAGACACAAGCACTGAGAATGGTCTCCAGCTGCCAAAGAAGATTGTGGATGCCAAGAGAAAGGTAACCGTTTCTCATCCCCTCCAGTGGAATTGGTTGCCTCTGGGAGCCCACATTGGCTGGCAGTAGACATGGCTGAGTTTACAAGCTACAAAGACACTGCTTCCAGCCGCCACCTGCGGTTCAAGTTACAGAGTCTAAGCCGCCGCCTTGATGAGTTGGAGGAAGCCACAAAAAACCTCCAGAAAGCAGAGGATGAGCTCCTGGACCTCCAGGACAAGGTGATTCAGGCGGAAGGCAGCAACTCCAGCATGTTAGCTGAGGTTGAAGTGCTGCGCCAGCGAGTGCTGAGAATTGAAGGCAAAGACGAGGAAATTAAGAAAGCAGAGGACCTCTGTCAGCTGATGAAGGAGAAGCTTGAAGAGGAGGAAAACCTCACCCGGGAGCTGAAATCTGAGATTGAGCGGCTTCAGAAACGGATGGCAGAACTGGAGAAGCTAGAGGAGGCCTTTAGCAGGAGTAAGAATGACTGTACCCAGCTCTGTCTGAGCCTGAACGAGGAGAGAAACCTGACGAAGAAAATCTCCTCTGAGCTGGAAATGCTCCGGATCAAAGTGAAAGAACTGGAGTCTTCCGAGGACCGGCTGGATAAAACTGAGCAGAGTTTAGTGTCGGAGTTAGAAAAGCTGAAATCACTAACTCTGAGCTTTGTAAGTGAGAGAAAGTACTTGAATGAAAAGGAGAAAGAAAACGAGAAACTGATAAAAGAACTTACTCAAAAATTGGAGCAGAACAAAAAAATGAACCGAGATTACACCAGGAATGCTTCGAATCTTCTGGAAAGGAACGACCTGCGAATTGAGGATGGTATCTCTTCCCCACTGCCGTCCAAAGAATCAAGAAGGAAGGGCGCTCTGGACTATCTAAAGCTGGCAGAGAATGAAACAAGAAACAAGTCAGAAAACGAAAAGAACCGCAATCAGGAAGACAACAAAGTAAAAGACCTTACCCAAGAGATTGAGAAACTTAAGACACAAATCAAACATTTTGAATCCTTAGAGGAGGAGCTTAAGAAAATGAGGGCCAAAAATAATGATCTGCAGGATAATTACCTAAGTGAACAAAATAAAAACAAACTCTTAGCCAGCCAGCTGGAGGAGATAAAGCTACAAATCAAGAAACAAAAAGAATTAGAGAACGGGGAGGTGGAAGGGGAAGACGCTTTCCTGTCCGGCAGAGGCAGGCACGAGAGGACTAAGCTGAGAGGCCACGGGAGTGAGGCATCAGCGAAGCACATGGCCCGGGAACTGTCCCCCCAGCATAAGCGGGAAAGGCACTGCAACAGGGAACTGACCCTCAACAATGAAAACCCTCTGAAGAACAGGCAGGTCTCCTCTCCCAGCTTTACCAACAGGAAGACGGCCAAAGCTTCCCACGCAGGGGCAGGTGCCGACAGTGGGGCTCAGGAGACGAGGAGAACCGAAGACCGGTTCACGGCTGGCTCCTCGCAGAGCGAAGGGAAGAAGTCCAGGGAGCAGCCGCCGGTGCTCAGCCGCTACCCGCCCGCCGCTCAGGAGCACAGTAAGGTCTGGAAGGGCGCTCCCAAGCCAGGTACTGAGAGTGGGTTGAAGGGAAAAGTAGAGAAGGCAACGCGAACGTTTAGTGATAACACCCATGGATCTGTTTCCAATGACGTGTCGGGGAGAGGCGACAAGGCTTCTGAGACCTCCACTGAGGCCCCCTTTGGCAAGAGGGGGCAGGTGCCTGGCAGTGGAAGTCAAATAACTCAGGCTGCAGATGCTGGCAGTTCTAAAGCCGTTGGAGCCCTGGCCACATCTCGACGATCTTCCTCAGAAGGGCTCTCTAAGGGGAAAAAGGCCACCAGTGGCCTGGAGGCTGACACCAGTTTCCCCAGCTCCAAGACTCCACCTCTATCAAAGTATCCTTATAGCTCCAGAAGCCAAGAGAACATCCTTCAGGGCTTTTCAACCCCAAGTAAAGAAGGAGTTGAACAACCTGTGGCAGTTGTGATGGAAGACAGTAGTCAGCACGAGGCCCTGAGGTGTCGAGTCACCAAGTCCAGTGGCAGGGAGAAGCCAGACTCGGACGACGACATGGACATGGTGTCTCTTGTTACTGCCAAGTTGGTGAACACGACCATCACTCCAGAGCCAGAGCCCCCGCATCAGCCCCAGTCGAGAGAAAAGGCCAAATCCCGAGGAGCGGTTAGAGCCTCCCTGTTTGAGAACGATAAGGATATTGGAACAGAAAATGAATCTGGGAAAGCTGTCAGAGCCTCCGCCAATGCCATGGAGCTCCCAGAGGCCAATGGCTCCGGGGCAAAAAGCCAGCGGCCCTTCAGCCCCAGAGAGGCCTTGCGGTCTAGAGCCATCATCAAACCTGTCATCATTGATAAGGATGTGAAAAAAATCATGGGAGGATCTGGAACCGAGGCCGCACTGGAAAAACAGAAATCTGCTTCCAAACCAGGGCCAAACAAAGTGACCAGCAGCATAACTATCTACCCCTCGGACAGTGGCAGCCCGCGAGCCGCTCCGGGCGAGGCCGCGCGGGAGAGGCACACGTCCACAAGCAACATCCAGGTCGGGCTGCCGGAGCTCGCCTCGGTGAGCAACCACGTCAGCTCCCCCTTTGAGCTCTCCATTCACAAACATGACATCACCCTGCAGCTCAGCGAAGCGGAGAGAACGGGAGATGGGTCCCTGAAGAACAGGCCGGAAACTGTCGTCTCTCGGAGCAGCATTATAATCAAGCCATCGGATCCGGTGGAGAGGAACAGCCATGCACCCACAGTGGAGACAATCAGGTGGAAAAGCCATAGTGCCCCTTTGGAAGCAGGCTCTCCGGATGCCAGGCACATCACTGTGCGCAACGCCTGGAAGAGCAGGCGAGACTTGAACTCTTCAGAAGACTCCCCAGCTCGAGTAGGTAGACACGTGGAGTCTCCCAACCCCCACACCCAGAGATCGTCCTCAGACTGTTCAGACCCTGAACAGCCCGGCTCGTACCTTTCTGAGCAGGGCACTCGAAGGGGCGGAACCTCAGGGGAAGTGCCCGAGCTCGCCTCCAGAAGGACCCAGAGCAGCCTTGCTGTGTCGGAGGTGTTCACGCGGCGGAGTCGGGCAGGGGACGCCGTTCCGGCTGAGGCCTGGAACCACTTGGCAGGCACGGAGGAAGGGGATGACTGCACCCTCAGCGTCTACAGACGACTGCACAACTCCCTTGAGAGGTCTGAACTGTCCGTGACGCAGGGGCCACCAGAGCCTGGGCGCACGCGGGCTGAGCAGCGGCTGCGGCCCACCAGGCCCTGTGCGGAGGACAACTGAGCCGGCCGGGCGACGCCTGCCGTCCCCTCTGCCCCTGCTTCTCAGCTCATCCACCTTCCCGCCCTGAGGAGGAGCCAGGCCAGACCCCAGGCCTTGGCTGGGAGACTGCGGAGAGCCTGGGTGTGGCCCCTTGCTTGCCAGTTGGCCAGAGGGGATCAGAAACTACAAGCTGCGTGGCCACCTGGGCCCAGCCTTCCCTGATGCATGAGTTTTCTCTCCTTGTCCCCGTCCCCCAGGTAGGATGGGCCAGTCTGGCCCCCAAATGAGGAAAGACCTAGAAAACCCCTTGGATCCCCACCACACAGCAGCAGCCAAATCTCTTCCCAGCTCCTCAGTGGGATCTGTGTCGTAGGGCAACCCCTTCTGTGTGGTTAACATTCTGATTCCTTAGTATCCTCACCGCATCCAAGCTCACTCGTTTGCCCAAGGGGCCTGTGCACCCACCAGCCATCAGCTTCATCTGGGGGGCCTCCGTTTCTTCCCCTGTGGCATTCCTCAGACTTTTACAGCAAGAGAGATCTGTGTCGCCTCTAAGGGTTTACGGAACTACCCTTTAGGTTGATGTTTCTCTGACTTGTCCCCCTGGCTGACCATCGTTTTCCAGGGGCAGAGCACACGGGTACCCTACCTGCCTACTGGAATGGCATCATCCCTCGTCACCAACCCCGGCTCTCTGCTTACCTTCTAAGGCACCCGGGAGCGCACGAGCCTCGTGTCTCCTTCCCTGGGCACCACCGTGCTGCTGGCCCGGCCTGCTCTTCTGCGGCTGGAGACCTCAGGCTGACTGCGTCATCTCCTCTGGAGTATTCCCAGACTCCACTGGGCCAGACCCAGCATCCTCTAGAGGCCTCCTAGGAAGTGCCAGCGTGGGGGAGAGTGGACAGGAAGAAGCGATTTCCCTTCAGTCACTCTACAAAGCAATAGCTCCATGAAAAAGGCGTGACCTTTGTTCCTTCTCCTGGTCCCCCAAGGAGGAGGTATCGCACTTTACCAGGCTGATGCATCCTACCAGAAGCGGGCCCCTGAGCACTGCAAACCAGCGATTGTCGTGACGACTTTGGAGGAAAGGTAAACATGCCCATCGAGAGCCCCAGGCTTACACGGTTCAGAAAGCAGCAAGCCTTTCAGGAAGCCATGGAAAGAAAAACGGAAAAAAAACCTGGTACATCCTTGTACCACTCCCCTGGGGAAGAACCATGTATTCTTCACACTGCTTTTTCTATAGCATTCTATCAGTTCAAAGCGATCCCTTTTCAAAGGCTACCTTTATGAAGCCGACACTTCCTTTGTAAGGAAAAATTGCGTTGGAGTAGAAGTTGAGAAAGCTATTTTCTTCATGGCTTTATACTTCCTCCTGTGTGACCTTGGGCAAATCATTGTCCTCTTGGGGCCTCAGTTTCCCTATCTATAAAATTAGTTCTTTCAAATGGATGGTCTCTAAGGGTCCTAAACGTGGCATTGTAAGTTTTGTTTCCACCCTGTAGGGGGTTAATTCTCACTGTTGGAAGGTATTGTCCAAATGGGTTTACATGTGTCCTTCCCACTGCCTATGTTTTTCTGGGCCTTATTCTTTCCAGTTTCCTGTGTTTTAATGTCGAGAGGATGAACTCAGAGAAGTTACCTTGGCCCTGTTTTTCCAGTCTGTAAAATGGAAGGGTTAGATTAGATGGTCTCTGTGGCCCTTCTCAACACCAACCTTGCCCAGTGCTGCACAGCAGGCCATGTGCTTTCCATGACATGAGTTGGTTTATCTCCGGTTCCAGTGCTTCTTGAATCTTCTCTGCCTCCACTCAGGGTGGGAACCAGCATTCACCCCTCCCTTGTCTGCATCAGGTTTGGTGATCCTGGAGGAGGCTTGGGGAGCACCTACCTGACTTTCACGGACAGGAGTGTTTTGCTCATACTTCATTTCCCGGAGGTTTGTCAATCCAAGGGTTGTAATGTGGTTTGCCTTTTCTCCTCATCGCTGCCTCAGATGCTCAAGATGCTGTTTTCAGAATCTCTTCCTGCTGCTTTTCCTGGGTCAAGGCTGCAACTCCTCACTTGTAGCCTCCCTGCCACTCTTCACTGGTCAGCAACCCTGAGAGTCCAGAGGAAACAGACCTCTGTGGTAGTCAACTGAGACTATAGATGTTAGGTCTGTGGCTCTTTACGGGTGGAAACAGGCACCAGACCATGCCGGCAAAGGTCTCGGCAATAATTCTTGTCTCTTTGGGCGTCTGGAGCCCTGGATTCTGGTGCTGTAGCTCCTGGTGCCAAAGTCTGGATCTTTCCACAGTTCAGCAGCACCAGCATCTGCCACCGCCCAGAATGCTCTGTGGGAGAGGGACAGCCGTGGTGCCCTCTTGCTGGGGCTGCTGACTTAAACTCTGAGTGCAATAGGGTTTGATTGTACAGTTATTTCAGGATAAATAGTTTCCTTATTCTGCACACTTTCTAGAGCCCGCTGTAAAATATATTTTATTTTTAAATGTCCTCAACATTGCAGAAAATACTACTTGTAATAGCAAGTGAAGGCTAGAGGCGCAGTTCCTCTGCGCTTCAAATGGCTGGCAAGGCTGGCTCTCAGATTCCAAAGTTGGAAGGCCCATTTCCGAAAAGCAATCTAGGCGTGACTGTCTGGCCCCAGACCTCACCATCAGAGGTCCTGGAGGAAACTTCCAAGTGGGAGACCTAGGAGTTGAATAATTGTCTTATCAAGCCAAATATTCCCACTGTCCCAGCCAACACACCCACTTTGTACAACCAGTCTCTTCCACAGCCTGGCTCTGACTCGGACTTTTCCTGGCAGATGTGTGGTTGCGGGAGGCTCCTAGGAGGGTCGGGGAACCTGGCACTCCAAGAGCTGCTCGGCTGGAGGAAGGGGCGCTGGAGGCAGAGCTGGCTACACGCAAGGAGCTGGTCTCCGCCACCTCCTGCCGCCTGTCTCACCACTCGTGACATGCGGAACAACCAGAGAAAGAAAGGGTGGGGATGGTGGACAAGGAAGCCGTGGCTGTTCTGCTTTTGTGTGGCAAGCAAACAGTTACAGGGTGGGTTGAAGGGCTCTGCAGTGGGGCCAAGGACTCCAACCTCAGCCACAGGCGAGCTTGCACATAACATCATCCTCTCACGGGGGTGGGGGCGTCTGTACTGATCTTAGACTTGTCATCTCGGGGTAGTTTTACTTCTTTACATTCAGTGGGTTAGTGCCAAGTGCTCCCACTCCCCAGGAAAGGACTGGGGACCCCCTGTCCGGGTCCCCAGCTGCCTTTGTTGGTGTGGGCTTATTGTTACTCTGACAGGACTGCTTTGGAAGAGCTGCTTTTAGGGATTCCCTTTTAAGTACCCCAGGTTGGGAACAGGGTTCTCACAGCCAAGAGCATAGGAAAGGGGCCCTATTTTCCTGCTGCTTCACAGCTCAGAACATGTACTGAATGGAATGTATTTTTAAGAGAATAAAGTCTATTTTTTTTTTTTTTTTTTTGTATTTTAAAGATGGGAGGGCTAGGGAAGTAGCCCTCAAATAAACGGTTATTACCTTATAGGCCCCCTCGCTGGGGACACACCAGTGTGGCGGTCTACACCTACTCGCTCAGACAGGTCTTCTGGCCGCTCCCTTGCCCCTTGGAGGCTGGTGCAGCAGCTTCTCTTACATTCCTGCTCCAAGCACGGGACCGAGGAGGCCAGACCCTGTCACTGGAAACCAGGGCAAAGCCATGAGCAATGACTCAGGGCTCCTGGGGTGCATGTGTATAGTTGAAGCTGCCTGTCTGCATGTATCCTCTGGCTCTAATGCGGTCTGTTGGCTCTGCAGCACAATATGTAACCAATAAAGCTCCCTAGTTTCCACATGCTCTGTGTGAGTGTGCGTCAGTGATGCCATTCTCCTTGATGTCATCTCTGTGTACAACTGTTGCTATGCACTGGTGCAGCTAGTATATTTCACTGTGTTTTACTGAAAATATTCAGCCAATTACAGATGTCATTAAGGACTGGAAACATAGCTGAGGCTATGGATGTTTCCTCAGACTCATGTAAGTGGAGTTAGAATCATAAAGCAGTTATTTCATTGCTGCATTTTACTTTTAGGCTTATCTGTCATCAGATACATACAAAACCACCATCTGTATCTCCCAGGCTGCCTGTGTCATTAAATAACACAAACTCTTTAAAAAGCATGTATCACTACATCAGACACCTAAGCCCCTGAGGTTCATGAACACAGATGTTGATGGCAAAGCTAGGGTTCAAATATAGGTTGTATTCCAAAGTCAGTATACTTTCTCCTCCATGTTCTCAGCTTTACGTCATGGTTACATCACTTGTCCTAATCCTGGTGTGCAAATTCTCCCATGGTTGTCATTCATTCCAACTAGGGAAAATGCCCTCTCCATCTCCACCTTCTAGTCAGACTATAATGTCCTTAAATCTTACTAAGGATAAAACCTCATTTAAACTATTCTTAGGAAAGAATTGACTAACAGGAGTAAAATCCAACTTACTGAAGCAGATTATGTACCTACACTTAACGGTAACATTGTTTGGAGCCCTTTGGAAGAAACAGGTGCAGTTCCTTCTTTGTAAAAACATTTTAACCTTACATGGCGAAGATGACTTTGCAAATGTGACTAAGCATTCTGACACAGGAGAGGTGATCTGGGTGGACCTTAAATTAGAAGTATCCTTATAAGAGGGAGACCAGAACAAGATAGCGTGATGATGGAAGCAGAGATTGGGGTAATGTGTTTTTAAAATGGGGAAGGGGCCACAAGCCAAGGAATACAGTCAGTAGAAGCTGAAGGAGCAAGGAAATGGAATATCCCGACAGTCTGCGTAGCTGTTATCTAAACCCTTGATCTTAAACTTTTTTATCAGTACCTTGGAGAGACATGGAAAGTTAGCATATACCCATGGGAGGGAATCTAGGGGAATAAAGCCCGAATGGTCTGCCAGAGGCCTAGCCAAACTTTGTGTCAAGGCCTGTGTTTTATCTTGAAAATTCATTCAGCTTCCTAACACCCATATGCATGACCTGCAGGTTCATACCCCTGGCACAGGGTCACCCCACAGTCCCAGTGGGGGTGAGTCTAGCCCCACAGATAAGCATTTTGCTCCCATGTGAAACCCTAGGTCCTGTCTTCTGATCACACCAAACCACTTTCTCCTTTATCTCATTTTAACATGGATAAAC EMBV3_16585 GACCGGACTCTGAAGCTACCTGCAGTGAAAAGCATGTTCTTAGGGAATCTGTGAAGGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27128 CGTAACAGTGTGGCCTTTCGTAAAGAAACAGATTGGTTTCAGTTTAGCTGAAGACTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41589 CCCCTTCTGGTCCCCACGCTTTGGTATAATATATATACTTCTCCATACACAGACCTCTGC Gene GeneID:538794|CPEB4:NM_001105420:136_cdna UTR3_Alt 2 NULL GeneID:538794 20 GENE CPEB4 MGC159945 cytoplasmic polyadenylation element binding protein 4 EMBV3_37838 CCCTTCCTGCGCCATCATGATCAGCACTTATGAGTTCGGCAAAAACTTCTTCCAGAGGCT Gene GeneID:509684|SLC25A39:NM_001075415:230_cdna Constitutive 2 NULL GeneID:509684 19 GENE SLC25A39 MGC140025 solute carrier family 25, member 39 EMBV3_12126 CTACTGCCTCAAGCACAGTGGTATATTCAGCGTTTTACGATGGGATAATGAGACAGATGT Variant GeneID:786620|LOC786620:NM_001105641:200_cdna 452^637 1 EMBV3_35325 GeneID:786620 11 GENE LOC786620 MGC155067 hypothetical protein LOC786620 EMBV3_21255 AGATTCTTTAGCCTCAGAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTCAAGAA Gene GeneID:540784|C1H21ORF91:NM_001037617:4_cdna Constitutive 0 NULL GeneID:540784 1 GENE C1H21ORF91 MGC133773 chromosome 21 open reading frame 91 ortholog EMBV3_24822 CTATGCAAGTCTGCGGTAGGAGCAGATAGCAAGAGATTGTGTGTGCTGTTGGGTACACAG Gene GeneID:533166|SORL1:XM_002693087:438_cdna UTR3_Alt 2 NULL GeneID:533166 15 GENE SORL1 NULL sortilin-related receptor, L(DLR class) A repeats-containing EMBV3_16356 TCCTCACACTCAGGACTGGCTTTATGAGGAGACACTGTTGGGATTCCAGAGCTTTCTTTT Gene GeneID:533660|DNAJC18:NM_001015649:5_cdna UTR3_Alt 2 NULL GeneID:533660 7 GENE DNAJC18 MGC129069 DnaJ (Hsp40) homolog, subfamily C, member 18 EMBV3_11270 CCTATTACCCCGCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCACCCGGGCTTT Gene GeneID:526233|EGR3:XM_002689773:49_cdna Constitutive 0 NULL GeneID:526233 8 GENE EGR3 NULL early growth response 3 EMBV3_01120 AGGCTCTGTCTGTTTGTCTGATGAACCTCTGCTTGGCCTGCTGTTGGAAGTGGGATTAAG Gene GeneID:512203|C8H9orf23:NM_001046111:19_cdna UTR3_Alt 3 NULL GeneID:512203 8 GENE C8H9orf23 C9orf23 MGC137146 alba-like protein C9orf23 homolog EMBV3_27156 GGAACCAGGAGAGAAGCCAGCCTCAGCCAGCCGTTTCAGAATCCATAAAGGAGACGTTTT Gene GeneID:534247|HLCS:XM_002685154:128_cdna UTR3_Alt 2 NULL GeneID:534247 1 GENE HLCS NULL holocarboxylase synthetase (biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)) ligase) EMBV3_01855 AGGCCGTGAAGCCAGCAAAGAAGAGTTCTGTCCGAGTTTGTGAACCTTTTTTTTTTTTTA Gene GeneID:505849|TFAP2A:NM_001080228:208_cdna Constitutive 2 NULL GeneID:505849 23 GENE TFAP2A MGC151772 transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) EMBV3_28043 CTAGGGGATAATCTGCTGCTGGTAATTAAGGAACTCCAAGACAAACCACTGAGTCATGGC Gene BVV0102_327328 + 1 EMBV3_01830 GK000001.2:84827426-84946742 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41850 GGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGATTCTAAAGGGGC Spike ESK0401 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07322 AGCATGGAGCTGAGTGTGCTGCACTGCCATGTTCCTGTTTATACTCTTAAGGCCTGGTGT Gene BVV0102_299363 + 0 NULL GK000022.2:17022571-17029814 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02489 ATCTTCTTCAGAGTGAAGACCTGCAGGAAGGCAGCCCGTGAGAAGGATGAACCTTGCACA Gene GeneID:511180|LOC511180:XM_002695125:628_cdna Constitutive 0 NULL GeneID:511180 18 GENE LOC511180 NULL similar to sialic acid binding Ig-like lectin 5 EMBV3_15122 GCAATTGGAGCGGCTTTCAGTGCTGGATTGACGGGAGGAATCAGTACTTCTATAGCTGTC Gene GeneID:521004|SLC39A10:XM_002685505:26_cdna UTR3_Alt 2 NULL GeneID:521004 2 GENE SLC39A10 NULL solute carrier family 39 (zinc transporter), member 10 EMBV3_03456 CTGTCCCTCAAGTTCGCCTACTGCGGCAAGTGGTTTGTGAGCACTGGGAAAGATAACCTT Gene GeneID:514326|TLE3:XM_002690487:429_cdna UTR3_Alt 3 NULL GeneID:514326 10 GENE TLE3 NULL transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) EMBV3_15280 TCTTCATGACCCTCTCTGCTAGCCAGCTTCACCTTCCTCCCATCCTGAACGCACTACTTA Gene GeneID:615026|LOC615026:XM_002687008:28_cdna Constitutive 0 NULL GeneID:615026 4 GENE LOC615026 NULL similar to TRB@ protein EMBV3_04286 TCGATTTCTATCGTTCTCCACGTTACAAGTGCGACTTCTGTCCGACGATGCAGCGCTAAC Gene GeneID:788579|IFFO2:XM_002685794:675_cdna Constitutive 0 NULL GeneID:788579 2 GENE IFFO2 NULL intermediate filament family orphan 2 EMBV3_26821 GCCAAGTCTGCAACAAGACCATCACTACCATGTGAACTTGTGAATGCGACCTGCATACGC Gene GeneID:508151|DSG2:XM_002697712:33_cdna UTR3_Alt 2 NULL GeneID:508151 24 GENE DSG2 NULL desmoglein 2 EMBV3_23485 GGCTGACAACACCTGCATCGCCTCAGAACTTGTTAGAAATTCAGAATCCCACCACACACC Gene BVT0102_027771 - 1 EMBV3_04960 GK000010.2:37095810-37115365 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00264 ATTAGCTTCCTGGGCAACAAACCTCAAGACGTCCATCAGAGAGGCCAACAAGGTGCTCTG Gene GeneID:100140494|LRMP:XM_002687734:61_cdna Constitutive 0 NULL GeneID:100140494 5 GENE LRMP NULL lymphoid-restricted membrane protein EMBV3_21123 CTGTTCAATGTCGTGTCTTTGAAACTTCATGACTGCCTGCTAGGATCTTTTGTGCCATCT Gene GeneID:522928|PHF3:XM_002689978:7_cdna Constitutive 2 NULL GeneID:522928 9 GENE PHF3 NULL PHD finger protein 3 EMBV3_43612 CTCCTCTGTTTATTTGCCAGAAAGGTGGGGCTCATACTTACCCTATCCCTCCCTTGAGAC Gene BVT0102_249496 + 0 NULL GK000028.2:27685853-27729163 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19102 TTCCTTTGGACCTACAGTTTTTTGCATATGCTGCAGCCACTTTGTGAGTGAGAATGGATG Gene GeneID:539591|ARMC8:NM_001046458:66_cdna Constitutive 1 NULL GeneID:539591 1 GENE ARMC8 MGC137339 armadillo repeat containing 8 EMBV3_25060 TAAACCAGACTGTCGCTCTGTTCACTTTAATGCGGGGTACTCCTTTCTCGGCAGCGAGTT Gene BVT0102_012094 + 0 NULL GK000024.2:61275204-61385877 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24561 GTCCCAGAGACTTTGTCATATGCTGGTAGGCATTCCATACCTCTACAGTACCTTTCAGGC Gene GeneID:790274|LOC790274:XM_002693679:319_cdna Constitutive 0 NULL GeneID:790274 15 GENE LOC790274 NULL similar to olfactory receptor, family 8, subfamily K, member 5 EMBV3_17376 GAAAATCTCTTCCAAGTTTTCCTGCAACTAGTAGAGTCCATGTCCACAGCCTGGCCATTG Gene BVV0102_286854 + 0 NULL GK000007.2:14747582-14756412 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211947 1 XLOC_130045 Coding TCONS_00211947 XLOC_130045 Coding Coding ZNF317 7:14734725-14753513 j TSS159157 8566 1 TCONS_00211947_6 500 0.502685033854775 8 0.544472241443551 0.00039933948107817 0.000370292406717467 0.000322795197298861 0.000349878057617244 0.000210067997585148 5.70524436322786e-05 0.000292513957841708 0.000357457225634577 0.000496364343043249 0.000579396049113641 3.3259896493214e-05 5.19214671358485e-05 0.000145758877411251 0.00047838517610522 0.000193704576321117 0.0027898056063333 0.00131340943312417 0.00406486086778794 0.000290849984720998 0.000716785888930778 0.000158113739117365 0.00162922731346788 0.00122971443200482 0.00180711961288342 0.00039723805657513 0.000530720223338791 0.000394432954103272 0.000218085365130878 0.000280835008042887 0.000171147008951604 XM_583362.6 ZNF317 PREDICTED: Bos taurus zinc finger protein 317 (ZNF317), transcript 0.0 3961 100.00 0.256245622227411 NM_020933.4 ZNF317 Homo sapiens zinc finger protein 317 (ZNF317), transcript variant 0.0 1595 78.48 0.221923885127247 TCONS_00211947_6 sp|Q96PQ6|ZN317_HUMAN ZN317_HUMAN Zinc finger protein 317; 0.0 818 83.44 0.952 6 coding 0 0 0 0 -0.00871423654598527 0.974560971172792 0.012054455153954 0.866021579924716 AGAAGGCGGAAGTGAAGCGGAAGCCATTACTCTTGGGAGGAGAGTGCTGCTATACACATGGGAAGAGGAGTGGTCCACCGTAGCTTCTTACAAGCTCTTGGTCCTCGCGGCCGATCGGACTTTCCGTATGAACTTGTCATCCCTTCGGCCGCAGCTTCCGTGACCTTTGCTTCCCATGATTCTACTGTCGGTGATATGTCCGCTCCAGGAGACCCATGAGAGAGAAAGTAGCTTCCTGGTCCAAGGCCCTGTTCTTCAGGCAGATTTACTGTCATTCTCGCAAGATGGCAGCTCTCGGCCTGGCTCCCACATGTGCTATGCCCAGTCAGGAGCCTGCCTATATCCATGAGTCAGAAGTTCCTCTTTCTTCAAAAGACCATTCCTGTCCCCAGGATGTGGACCTGTTTGCATGCAATGGCCTGGAGCCTCATACATCAACCAGTGTTGAACCATCCCAGGAATCAGTGACTTTCCAGGATGTTGCTGTGGACTTCACTGAGAAGGAGTGGCCCTTGCTGGACTCTACTCAGAGAAAACTATACAAAGATGTGATGCTGGAGAACTACAGCAACCTTGCTTCAGTGGGGTGCCAGGTGGGCAAACCCAGCCTCATCTCCCACTTGGAGCAAGAAGAGGAGCTGAGGACAGAGGATCGGGAACTTCACCGAGGCCCTTGTCCCGATTGGGCAATGCCATCTAAAACCAAATGGTCAATTCTTATGGAAGATATTTTTGGGAAGGAAACATCTAATGGTGTGACAGTGGAAAACAGTCAGCTTGGAGAGGAGTCTGCGGAGTACACTAACCTGTTTGACGTCTTCAGCATAGGCGCTCATCTCACTCAGCAGATGGGAAGGCACACTGGCAAGAGACCGTACCACCACCGGGACTGCGGGGTGACTTTCAGGAACAGGTCCCATGTAACCCAACATGTGAGCATTTACAATGGGAGGAAGATGCATGAATGTCATCAGTGCCAGAAAGCCTTCACCACAAGTGCTTCCCTCACACGGCACAGGAGAATACATACTGGGGAGAAGCCCTATGAGTGCAATGCCTGTGGGAAGGCTTTTAATGACCCCTCAGCCCTCAGGAGTCACTCAAGAACTCATCTCACAGAGAAGCCCTTCGACTGCACTCAGTGTGGGAATGCCTTCCGCACCCTCTCCTCCCTGAAGATACACATGAGAGTCCACACTGGGGAGCGGCCGTACAAGTGTGACGAGTGTGGGAAGGCTTATGGCCGGAGCTGCCACCTCATTGCCCACAGGAGAACACACACTGGGGAGAGACCCTACGAGTGTCATGATTGTGGCAAGGCTTTCCAGCACCCCTCCCACCTCAAAGAGCATGTCAGGAATCATACTGGGGAGAAGCCCTATGAGTGCACGCAATGTGGAAAAGCCTTCCGGTGGAAGTCAAACTTTAACTTGCACAAGAAGAACCACACAGTGGAGAAAACCTACGAGTGTAAAGAGTGTGGGAAATCTTTTGGGGACCTCCTGTCCCGGAGGAAACACATGAGAATTCATATTGTAAAGAAGCCTGTTGAGTGCAGACAGTGTGGGAAGGCATTCAGGAACCAGTCCATCCTCAAGACGCACATGAATTCCCATACTGGAGAGAAGCCATATGGGTGTGACCTCTGCGGGAAAGCCTTCAGTGCGAGCTCCAACCTAACTGCGCATAGGAAGATCCACACCCAAGAGAGACGCTAGTGTGGGAAAGCCTTCAGAAACCAGTCGACCCTCAAGACACACATGAGAAGTCACACAGGAGAGAAGCCCTACGAGTGCGACCACTGTGGGAAGGCCTTCAGCATCGGTTCGAACCTCAATGTACACAGAAGGATACACACTGGGGAGAAGCCCTATGAGTGCCTGGCCTGCGGGAAAGCCTTCAGTGACCATTCGTCCCTCAGGAGCCACGTGAAAACTCACCGGGGTGAGAAGCTCTTTGTGTCATCGGTGTGGAAAAGACTCCAATGACACATCTTTTTTAAAGAAAAACATGAGAACTCAGATTGGCAGGGAACCTGACAGGTGTCAGAAAGGCAGGAAGCTTTGAGGAACTCATCTCACTGGGTATAAATTGTTAACTTGGGAGAAATCCAGTTTGTATAAAAACTATGGAAAGACTTGGATTTTTCCATGTCACATTGGAACTATGAGAACTCAAGGTGGTTGAGAAAACGTATATCTGAGGTGTGAGGAAGCCGTCAGTGTACATGTAGCTCTCAACAAACAGGAGAACTTGGAGAGGGAACCCCTAACCTGGTATTTAATGTCAGAATGACTTTAGTACCATCTTGTACCTCTGGGCACAAGAACAAGCTCATCCTGGAGGATCTCTGTAAATTCCATGACTGGACAAACCTTTCCTGGTCTGATTGTATCCTTTATGAGAGAAATCACACTAAAGAGGAAAATCTATGAAATAAGGACCATGGGGAAGCCAGTAACAGGTTGGCAAGCTATAGCCAGCTGTCTGTTTTAATGCAGCTGGCAAGTTTAGAATAGTGGTGGTGTTTTTAAAGAAGAAAAATATGTGATGGAGACCACTTTTGGCCCACAAAGCCTAAAATACTCATCTCTCTGGCCCTTTACAGAAAAAAAAAAAAAAAAAAGCCAATTCTTTATGTACAGCAGTGGGGATAATTTTGCTCCCTGGGGGACATTTGGCAAATCTAGAGACGTAGTTGGTCTTTAAAAGTGGAGGGGGGGTTGCCATTGGCATGTTTTGGAAGACACCAAGGATGCTGCTAAATATCCTACAATGCACAGGGGCTTTCCTCAAGAGGGAGAAAGTATGTGCCCCAGAATGTCAGTACTGCTAAGGTTGAGAAATTTTAACCAACAATTCCTCATATTTTTGTGAAACACGTGGGTACTCACATTATGAGAAATTCCTATTTACAGCTTCAAAACTATACTCAGTGTAATTGTTTTAGGAATCACATGAGAACCCACACTGCAGACAATCCCTCTGTGGAGTTTCATCCACAGCCTTCTCATGTGTGTGTATCAGAATTCTTTCCCCATTAGGATTTCTCAGTACATGTGGAATTGCACTTATCAGTCAGTCTTCTATCACGAAAATGGACCCCAGCTCATTAATTTTTCAGTCTTTAATTTTAATGTTACGCTCTTGCAAATAACCCTCATGCCTCATCACAGAAGGTTTGTACATAGTAATTCTACTATAATTTCATTTGTGATATGTGTTTATTTCCTTTTGGACAACTTATTTTAAACAGTGGGTTTTTTGTTTGTTTGTTTAGAATAGTGTCATGTGCTGTGTAACTTGTGGGTATTTTTAGTACCTGTTTGTTACAAATATCTAATTCAAATAAGTTGTGATCAGAGCAGGATGTCATCATCAAATTGGTCCTTTGAAATGTTTTTGGCCTCCTGTCCAGCCACAGGTAACCTAAACTTGTAGTTGCATCTTCAGTATCTTTTTCTTTCATATCAGAAAGATCCAAGTTCTGATTAGTAAGGTATGCTATTTTAGAAAATCTCTTCCAAGTTTTCCTGCAACTAGTAGAGTCCATGTCCACAGCCTGGCCATTGACAAAAAAAGCAGATGCCATGATACAGACTGGAGAAAGTGCTTGAAAAAGTCTTACCTGGATTCCTCTCTACATTTTCTGTGTGCGCTCCCCCCCCCCCCCTTTATTTCCCTTACTTCTCACCTTGAGAAGAGATCCAGTACCTAGTGTTAAAGATCCGTCTTATGACCATGAGGATGCAAACCACAGGCTAAGCAAGAGGGGTGGGGCAGTTTACTGCAGAAAAATCACAATAATCTTGGCTTCCTTGGTGGCCTCTTTGAGTGTCTGCACTAGCCCTGGATTTGTTATTTCCATACTTACTATTACATGAGAAAAAATAAAACTGGTTATTGGTTTAAGCTGCTTTGGATATTTCATTGTTTAATCTATTTAATAATTGTTTTATTGGTGGTGGGAATGTTCTTCTGTACCAGATTGGATGTTGTCTGTAACCCATGCATCAAGTCATTAGTGGGGTTGGGTAGCTGCTGCTATACATGTTGGTATAATCTGCTTATAATTGTTGGATTTGGGTTTTTAAAAATCCTTAAGGGCATCCCCGGTGGCTTAGTGGTAAAGAATCCACCTGCAATGCAGGAGACCTGGGTTCCATCCCTGGGTTGGGAAGATCCCGTGAAGAATTAAGTGGCAACCCACTTCGTTATTCTTGCCTGGGAAATCTTATGGACAGAGGAGCCTGGCAGACTACAGTCCATGGGATCGCAAAAGAGTCAGACATGACTTAGTGACTAAATAACAAAAATCATGTACCCCTGTTTTTATAAAATTGTATTTCATGTCTCTGATGTTCTTAAGTATTATTTCTTGACTTGTGTTGAAGTAAGTGTATTGGTTTTCACAAAAGCCCTGAGAAATAGGTACTGCCAATAACACCCTTTTGCATATGGGCAATCTGAGGCAAGGAAGTTTAATGTTGCTTGTTTTAAGTCAGCTCATTAATAAGTTGTAATGCCTTTTTTGTTGTTTATTTGTTTTAAATATTTATTTATCTGGCTGTGCCAGGTCTTAGTTGGGCATACAGGATCTTTAGTTGCATCATGTGGACTCTAGTTCCAGGGATGGAACCTGGGCCCCCTGCTTTGGGAACACAAGTCTTACCCACTGGACCACCAGGGAGGTCCCTGTGCCCGTGTTTCAAGTTTATTCTTATGTCAGGCCCTGTTCTGTGCCCTGAGTCTGTAGCGATGAATCAGGATTTTTGCCTTTATGGTGATCACATTCTACATGGGATGAAGGCACGTGATAAACAAATGAATAAATATGTGGTATATCGGCAGTCAGTTCAGTGCCCTCAAATTTAAGCACAGTGATGATGACAGGGATGTGGGGGTTCATTGAATCTATTTTATGGATAGGGAAAACCTGTTGCTTAAGGGGACATTATAGAGCAGAGATGTAAATTCCCTGCAAGTGTGTGCCACGTTCTAATGTGCGCAGGAGCACCCGAGGCAGTTCAGAGGTCATGAAAAAAGAATTTTGCTTGCTAGGGCCAGTGTGGCTGAAATCTGGCAAGCTTAGGAGTCACAGAAGGTGGTAAGGTCAGAGCTGGATTGGGATCCTTTTCACGGAGGCATCTTGAAGGTCGACTGGAAAGACTTTGCCTTTTATTCTCTGTAGAAGGTCAGTGGAGGGTTCTGTATAGAGAGGTAACAACTATTCCATCTCTGTTTTAAAGAATCATATTGGCTTCTGGGTTGGTTGGCTGAGTAGAGGGATAGGATACAAAAACAGAAATCTGTTAGAAGTTCATTGCTGAGTTCAAGTTAAGTATAATGATGTCCAGTTGCTGTATTTAAAATGGATAACTAACAAGGACTTACTGTATAGCACATGGAACTCTGCTCAATGTTATGTGGCAGCTTGGATGGGAGGAGAGTTCAGGGGAGAATGCATCCATGTATATGTATGGCTGAATCCCTTCACTGTTTATGTAAAATTATCACAACGTTGTTAATCACCTATAGCCCAATACAAAATAAAAAGTTTATAGAGTTTGAAAATAAAATTACAGTATTAGTATTGGGTTGGCCGAAAAGTTCACTTGGGTCTTTCTGTAAGATCTCAGGAAAAAGCCAAATGAACTTTTTGGCTAACTAGCAAGGGTATTTTGAGAGTCACATTGCATATGGCTGTAGTTTCATTTTCACTTCGGATAAGTGGTTCCTTATCATCCCAGAATTTGTTTAACAACAGCTGATGTACAGTTCCTGGATTGTTTCCACTTTCCCCGATTATGAACAATGCTGTTCTAAGAAAATGTATAACACTCTTTCTGGAGTGTTGGTGAGTTATTCCAGGAGTATGAAGTTGTTAGGTTGAAGGTCTGTGCATGTTCAGTTTATCTTAATGCCAAAGGTGTTTCTAAGTGTCTGTGTAATGCTTTGTGTGTGGTATCATTTAAAACAGGCATTGGTGAACTTCAGAAAAGTGTTTAACTCGTACTTTGTTGTTTACTTGCTAAGTCATATCCGACTTCTTTGCACCCCAAGGGACTGTAAACCGCCTGGCTCTTCTGCCCATGGGATTTCAGTTTCCCAGGCAAGAATACTGGAGTGGGTTGCCATTTTTTCTCCGGGGCATCTTTCTAAACCAGTGATCAAGCCCATGTCTCCTACATTGGTAGACAGGCTTTTTTGCCATTGAGCCACCAGGGAAGCCTTAACTCACGTACCATAAATTGTCACATGAACTCATCCGTGTAAGCAGGCAAGAAAAATGTTTTACATGTTTTAGCATTCCTGATAACTCCTTCTCGCCAAATAACAAACCTTGCCTAACTCCCCACGAGTGACCGGTATTCTGGCTTTGACAACATGGCTTGGATTTTTATTTTTGGACCCTATACAAATGGAGCCAAACAGTATACGTTCTTTAGTATCTATCTTAATTTACTCAAAATTTTTGTGAAATTGATCCATATTGTTTTGAGTTCCTCTAGATAGTAGTACATTTTATTGTGTTCCATTGTTTGAATATTCCAGTTTATTTAAGCAGTTTGTGTTGGTGGACATTTGACTTCTCAGTTTGAGGCTATTGTAAATAATGCTGCTATGAGCATATTTTAATATTTCTGATAGTGCATAAATGCTTGAGTTTCTGTTGGGTTTATATCCTGGACTAATATCACTGGGTCATATGCGATGCATATTTCACAAATGATGCCAGTTTTCCAAAGTGTTTGTAGACAGTTTTCCAACAGGCTCTTTTATGGAATTGGATCAGATGATACCAAATTTGCCTGCCTTTTTGGTACTGATTTATATATTCCAGATGTGGGCCTTATGGCTGGATGTTTTGCAAGTAATTTTCCCCATTCTGACTTGTCTCTTCAGTGTTTTAATTGTTATCTTTTGATGAAAGAAGTTCTTAATTTTAATGTCATCTAATCTTTATGGCATCCTCCTCTTGTGTAAGAAACGTTTACCTACCCTGAGGGCAAGAAGATATTCCACATTTTTTTCTGTAAGTTTTATTGTTTTTGTGTATACATTTAGATCTGTATCTTGGAACTGATTTTTTGTGTTAGAGTATAAAGTAGGATTGTTTTATTTTTTCCTTATTAACCCAACATCATTGATTTTAAAAGTACATCTTCACCCCAGGAATTTTCCACCTTTGTCGTATACTGAATTCCATAGGCGTTGGGTCTAAATTTAGGCTTAATTCTATTCTACTGTTCTGTTTGTTCACACACCATGCCACAGTGTTTAAATTATAAAAAAGAAGCTTTATAATAAGTCTTGGTATCTGGATGGACTAGTTTCTCCTCATGGTTTGTCTTTTTCAGTCTTTTCCTAGGTATTGTGTGTGTGTGTTTGGGGGAGGTTATGTGTACTTATCTGTTAACTTGTCCATCTCCATAATACTAGCTTGTTGGTATTTTTATTGGCATTGCCTTGAATTTTTAAGTTAACTTGGTCGGGAATTAATATCTCTATAATGTTAAGTTGTCTTATCCAAGAACAAGGGATGTTTTCCCATTTGTTCAAGTCTACTTTAGTGTTTTTCAGGAATGTTTAAAAATTTTCTTTTACAAGTATTCTAGTCTCATTAGGTTTTCCTTAAGTATTTAATCTTAGATTGTTAATTAAAATTTCTCAAGCATTATGTCTTCACAGCTTTTGTATGTGAGAGCTACTAATACTGTATCTTGATTTTATAATTTGCTGCTTCACTGAATTCTTTCATTTTTTTGAGTTCATTTTATTATTTATTTTCTGGGATATTCCAGGCATACTACTGTATCATCTACAGATTGAGTGAGCTTTGCTTGTTTATCAAAGTCTTTTAAAAAATACTTATTTATTTTTGCTGTGCGCTCTTAGTTGTGGTTTTGAACTCTTAGTTTCAGCATGCAGACTCTTGGTTACAGCATGCATATGAGATCTAGTTCCCCAGCCAAGGATCAAACCCAGGCCCTCTGCATTGGAAACATGGAGGCTTGCCCACTGGACCATCAGGGAAGTCCCTGTTTGTCAGTTCTTAAGCCTCTCGTTTTTTTTGCCTGTGTGGTTGCATTGGCTAATACCTCTAGTATGATAATAGAGGGCATTTTTGTATTGTTCTAGGTAATACCCTGTTTTTCCATTGATTAAGATAAATGTCTTTTAGAATGAAGTATACAATTGACCCTTGAACAACATGGGGGTTAGGAACACTGACACTCCACGTAGTAAAAAATCCGTGTATAACTTTTTTGGTCCTCTATATCCATGATTCCACATCCAAGGATTCAGTTGCAGATTGTGTGGTACTGTTAAACGTATTTTTTTGAAAAATCCATATGTAAGTGGACTCCTGCAATTCAAACTCATGTTTTTCAAGGATCAATATTTTATTATATTGAGAAGGTATTCTATGTTCTTAAATATTTTATCATAGATGTGTACTGTATTTTGTCAGTTTTTCTGAACATCTGTGAGGAGAATTGTGATTCTCTTCCTCTGATTTATTAATATATTAATAAATTTTCAACACTCAATAAATTTTGTG EMBV3_06559 TTCAGATTTGGTCTGAGTCTTCTCCATGTCCTCCCAGTGTCCTCCATGACCTTTGGGCAG Gene BVV0102_078099 - 0 NULL GK000022.2:14944972-15084120 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130046 1 XLOC_078757 NonCoding TCONS_00130046 XLOC_078757 NonCoding NonCoding - 22:15025400-15025994 - TSS96913 594 2 TCONS_00130046_1 60 1 0 0 0 0 0 0 0 9.817693572525e-06 0 0.00018596343029737 0 0 0 9.66089625254249e-06 0 0 0 0 0 0 0 0 0 0 2.82232997868662e-05 0 0 0 0 0 0 0 noncoding ATTTTCCCTGGAAATACTGTCTAGGTGATGTGTTCTGAAGACATGTTATCCATCTGCTTTCATCGGTGATGTCAGTTTTGATCCTGGTAAAGGTGCTGTCTCCCTGCTCCTTTGTATACTGAATACTTTTCTCTTGCTACTAATAAGCCTAAACCACCTATTGGAGAGACACACTAACCCAGGCAAATATCTGCCCCACAATAAACCACAACCCCCTAGAGCCACCATCCATGGATGATTCCTGCTTGAACCAATCTTTACTATACACCATCTCTTCAAGTCCCCTTCCAGTAATGGAAACCAGGTTTTTCTCTGGTTTAGTTTCCTTGGGTCTTCAGATCTGGTCTGAGTCTTCTCCATGTCCTCCCAGTGTCCTCCATGACCTTTGGGCAGGGATGAGGCCGCTGCTGTAGACTCAGCAGCCTTAACTGGAAATGAGGTCATGTGTGTTATTCCCCGTTAAACTGTCCACTGGTGATTTGCATAATAGAGTAGCCTGTGTGCACTTACTTCCTGGATCGTTTCCTGATCCTCCATACCCCTGTCGCCCTCCCTTACTCTTTGGTGGCATTTTGTTCATTCATATTCCCCACC TCONS_00126170 TCONS_00126171 . 5' 752 TCONS_00126170 TCONS_00126171 . 5' 752 EMBV3_07600 TAATTAGTATTAATACTTAAGTACTTAAGAGTACGTTTGGCTGAAACAGAGACAGAGTCC Gene BVV0102_405351 + 1 EMBV3_34043 GJ060109.1:1-4224 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43198 TGATCATGGCACATACTGTCGTCACCGTGAACCAGGAGATGCAACTCGGGATGGAGTACT Gene GeneID:617248|GRHL1:NM_001076450:237_cdna UTR3_Alt 2 NULL GeneID:617248 11 GENE GRHL1 MGC139899 grainyhead-like 1 (Drosophila) EMBV3_11193 GTAAAAAACGCCGCTGCTAATGTTCTCAGGGAGACGTGGCTCATCTACAAACACACCAGG Gene GeneID:408008|KCNN1:XM_002688571:260_cdna Constitutive 0 NULL GeneID:408008 7 GENE KCNN1 NULL potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 EMBV3_01713 GTGACTGCGGGAACACCAGATTGACAACACTCATCTTGGTTTACTCAAGGGCATCCATTC Gene GeneID:614112|SNX24:NM_001076311:29_cdna UTR3_Alt 1 NULL GeneID:614112 7 GENE SNX24 MGC139539 sorting nexin 24 EMBV3_21241 CATTCCGAGCAGGTTCTATTACAAGAAAGGGAAGTTTGTCTCCCCTCTGACCCTAGTGGC Gene GeneID:537431|ENPP6:NM_001040558:73_cdna Constitutive 0 NULL GeneID:537431 27 GENE ENPP6 NULL ectonucleotide pyrophosphatase/phosphodiesterase 6 EMBV3_00516 GAGGCTAGCAGTTCCTCTGGTGGCCCTCCCCCTTCTCTGCGTGGCCTTTTGCAAAATAAA Gene GeneID:508141|KDM4B:XM_002688920:88_cdna Constitutive 2 NULL GeneID:508141 7 GENE KDM4B JMJD2B lysine (K)-specific demethylase 4B EMBV3_35323 CACTGCTATTGAAATGGCTGAAGGGGCTCCTCCCCTGTGTAATCTTCAACCTTTGGAAGC Gene GeneID:100336637|LOC100336637:XM_002699805:53_cdna Constitutive 0 NULL GeneID:100336637 X GENE LOC100336637 NULL Nik related kinase-like EMBV3_21912 GAGTTCTTCTCCAACTCAACAGACATCGAGTGGGAAAATGCCCAAAGTGGACTATGTGGT Variant GeneID:615457|TK2:XM_002694895:944_cdna 256^473 1 EMBV3_22182 GeneID:615457 18 GENE TK2 NULL thymidine kinase 2, mitochondrial EMBV3_29464 TCTTAGTCGACATTTTTATGGTATCCAAAGGGTAGGCGAGGAGGGAGCTAAGAGCCTGGA Variant GeneID:617161|IMMP1L:NM_001079627:65_cdna 427^553 2 EMBV3_41883 GeneID:617161 15 GENE IMMP1L NULL IMP1 inner mitochondrial membrane peptidase-like EMBV3_12832 TCTGAATCTCCCAGGCTGTCTGTTCCGAGGGTGGATTGAGATCTTAGGAAAAACCAAGGC Gene GeneID:503626|PLA2G2D5:NM_001015888:69_cdna Constitutive 0 NULL GeneID:503626 2 GENE PLA2G2D5 NULL calcium-dependent phospholipase A2 PLA2G2D5 EMBV3_10799 CCATTCATTTGCTGGTGGACATTTATGTTGCTTCCATCACCTGGCTATTGTGAACAGTGC Gene BVV0102_399425 - 1 EMBV3_06027 GK000006.2:107493241-107505446 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20756 AAATGCTCACAAGATGATGGTCCTCGAAGGCAGACTATGGTGAGCGCTGTGACTGATCCG Gene BVT0102_082230 + 1 EMBV3_38533 GK000011.2:103015672-103039726 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026385 TCONS_00026386 1 XLOC_014981 NonCoding TCONS_00026386 XLOC_014981 NonCoding NonCoding - 11:103016047-103019414 - TSS18909 3367 1 TCONS_00026386_7 146 0.320760320760321 1 0 0.000246494224604342 0.000176308391692507 0.000453493388373779 3.20624058602269e-05 0.000173027712990081 0.000203230389508525 0.00010738513364524 0.000135252115984253 0.000452759112944892 9.03441254165044e-11 4.92040388516507e-11 1.16817803071954e-05 0 5.44089466807315e-05 0.000177716965183729 5.32010666882574e-10 0 5.35043578633752e-10 0.000204456975794215 0.000191583977714244 3.33593522283557e-05 1.42196111296537e-10 0.000229512802606848 4.48117651819076e-05 0.000123794674681769 0.000261865011684566 9.28737897226172e-05 1.8984929021185e-10 1.11796059291313e-10 8.21394404921621e-05 XM_005211508.1 RNASE13 PREDICTED: Bos taurus ribonuclease, RNase A family, 13 (non-active) (RNASE13), transcript variant X4, mRNA. 2e-142 511 93.49 0.1000891000891 0 noncoding 0 1 1 1 0.0179591448350661 0.88480008814598 -0.000232803198677967 0.996452794747551 GGAGGCGGTCACGTGACCCGGGCCGGGCGGGAGGGGCTGTGCAAGAGGCGTAAACAAGTTGGCCGAGCTGGGTGTGGTTGGGGCGCCTCCTGCATTCCCGAGCCTCGCACACCCGGATACTCCCCAACCGAGGGTCTCCCTGTGCCTGACCGCAGAGCTTCCATCTTGTTTCCCAAGGAGCCAATGACCCCCGTGGGCGAAGGGCTTGCGGAGAATCCCACTGACTTCTGCCCCTCAGATTGCTAGCATTTCAGACACCCGGTCACGACATCTGTGGAAAACCACCATAATCAGAGCTGGCTGCTTTCAAAGCCCAACCCCTTCATTCAATCCTTGCCCTGCCCCCTCCCTGGCTGTGTAAACCTGGACAAGTTTTGAAGTCCTTTGAGCCTCAGTTTCTTCCGCTGTGAAATGGGCATAATAACACGAGTGGAGTGAGGATTCAGGGACATAAAGTACGGAGGGTGTTTAAGCACAGTGACCCACGCAGGGTAAATGCTCACAAGATGATGGTCCTCGAAGGCAGACTATGGTGAGCGCTGTGACTGATCCGGACCAGGGTGAGAGAGGCCGCAGTCTGAGGTATCTGAAAGGCTTTCTGAAGGAGTGCGCATCAAGCTAGGCCTTAAAGGAAAGGTAGGTTTTATGAAATAGAAATGGGAGAGGCAGTTGGGAAGGAAAGAACTAAAAGAAGCTAGCACCGGGACATAACTCTGGGTGAGTTATGGAAACAACAAGTTTTGTCATGGGAACCATTTGGGTCACAAGGCAAGGCAGCATATGGCTTAAGGGGCCTACTGTGAGAGTGACCAGGGTTCCAGGAGGCCCAGCGTGGTCCCAGGTAGGACTGCTGTTAGCCTGTAGGGTTAGAGAGGCCCCAAGAGCATTAGAAAAAAGCCTTTCCTCTGGGCCCACAGTCCATGTGAGCAGAGCCATGCAGGATCTTGGCCCTTAGCCACCCACACCCACTTCTGGGGGCCCTTGAGCAGTGCACAGCCTTTATCACCATCCTGGCTTATGGGGCAGGTGGGCATTGACTTGGGAATTCCACCAGCCTAACCCTGCCTGCAGACAGCTGGGGAAGCCAAGAGGTTGTTGCTCAAACAGACTAGAGTGTGAACACAGGTTTCTGCCATCATGCTAATGAACTGAGCCTTCGTTTCTTCGTCTGCAACGTAGGGGTTTTAATATTAATCATGATGCCTACAGGATAGGGATTTGGGGTGGATTCAGTGAGACCTTAAGATGTAACCAGCATAAAGCCTATTTCAATAAGTGTTAGTTTTGTTAGCATTTCTCAGTGCACTCTCAGCTGGCATCCAATCGCTGCCTGGGGCGAGTCCACCCGGTGCTAACTTCGGTGTAGTCACCCAGCATGGTCAGGTGGGGCCCAGAGATGGAAGGGCTGGAGGAGAAGAGGGGCGTGCCCAGCTTTCCCTAGTCCACAGACCATCTCACAGGAGCAGATTCCTGCCTTGGCATTAGCACTGTGGCAAGGACTCGGGCACACTGTGAATCCACCAGGGATCAGGAGGGATGGAGTCGGGGGACGGGCACGACGCCAGAGCTCCAGCCCAGGAATCCCCTTTCCCCGCCCCCCTCTTCCTTGGCTCAGTGACCTCATCCTGCTGGAATGCTATCCTCCGTGGAAGGGAGCAGTGATACACGAGCCTCATCAGCTTCTGGCCCTCAAGGGGACCATAACTGCACTGTTACTGTTTATACAATATCTGGAAGAAGAATGGTAATAGTTCTCTCAATATGGACCGCTAGGGGCTTGTGAAGAGGAGGCTAGGAAGAAAGGCAGAGGCAGCCCTGCCCCTGCTCATGGGCTGGCTCCATATTTTCTGCTTTTCTGGGATTGATTTTGTCATTGACTTGTTCAGTCACTAAGTCATGTCCGACTCTTTTTGACCCCTTGGACTGTAGCACACAAGGCCTCCCTGTCCATCAGCAACTCCCGGAGCTTGCTCAAGCTGACGTCCATCAAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCGTCAATCTTTCCGGCATCAGGGTCTTTTCCAGTGAATCGGTTCTTCGCATCAGGTGGCCAAAGCATTGGACATTCAGCTTCAGCATTAGTCCTTCCAATGAATATCCAGGATTTCCTTTAGGATGGACTGGTTTGATCTCCTTGGTGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAGAAGCATCCATTCTTCAGCACTCAGACAGATGTTAATCAGACCACTATCTTCCACGTACCTTCCTGGATCCTCTCCAGGGCACGAGCTTCTGGCCAGGCTTTCTCCAACCATCTTGTCCACACTCAGTGACAGAACAGAAGCGATGAGCCCTCGGAGGCAGGTGGCACTGACTTGCTGTGTGTGAGGCACACCTGTGCATTTGCCTGGGCAGCAGCTCCCCCTCCCCATCCTGGGACCACAGCATCAACCTCAGGCAGCTGGACCCATCTGGCCAATCCCAGGTCCCAAGCATCCAGCCAAAGGGATTGGCACAGTTGACATGTGACCCAAGTTGGGCCAATCAGGGTGCTTCCTTGAGTCTTTATACATGGCCGCTGAAAGAGCTGTTGTCTTTCCTCTGGGGTCATTGAACTAGGATAAAGCTAGGGAGAAGTGGCCCTCCCCTTCTCCCTCTGCTACCTCAAGCTCCATGAACGCTCTAGCCAAAAGATGGAAAAGATACAGAGAAAGAGATGAAAAGAGAAATGTTGGTTGTTCTCCCCTCAAGGGACTTCTCCCCTTTACGAAGTCCCTGAGGCCAGCTTTACCCTGGGCTTCTGAGTTCATGAAGGGAAGACTGTTTTGGCTGATGCTAGTTTTAGCTGGATTTCTGTCCTTCCAGATGCAGTTAGATTTGAAGGCATTTGGAAGGACCCCACTAGTCAAAATTACATCCTTTTCAGTGTCACAGGTTTATCCATTTGAGGGGTCCTGTTGGTTCAGCTTTCTGCATGGCAGCCCCCTGCTTTCATTTCAGTTCAGTTCAGTTGCTCAGTCGTGTCTGACTCTTTGCGACCCCATGAATCACAGCACTCCAGCCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCACGTCCATTGAGTCGGTGATGCCATCCAGCCATCTCATCATCTATCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCGTCAGGGTCTTTTCCAGTGAGTCAACTCTTCACATGAGGTAGCCAAAGTATTGGAGTTTCAGCTTTAGCATCAGTCCTTCCAATGAACACCCAGGACTGATCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTC TCONS_00029253 TCONS_00029252 r 5' 292 TCONS_00029253 TCONS_00029252 r 5' 292 EMBV3_28807 GATTTGGGATTTCTCCAGTTCCATCAAAAGTCGGAGGATGACGAAAAGCTGAAAAAGAGG Variant GeneID:732539|SARNP:NM_001042654:85_cdna 420^514 1 EMBV3_15282 GeneID:732539 5 GENE SARNP CIP29 SAP domain containing ribonucleoprotein EMBV3_31503 CTTCTCATGGACCTAATGGGCTTGGAAAGGTGGATTGCCCCTGATGGTGATTATCCATAA Variant GeneID:506991|TXNDC12:NM_001015536:25_cdna 205^265 1 EMBV3_00355 GeneID:506991 3 GENE TXNDC12 ERP18 TLP19 thioredoxin domain containing 12 (endoplasmic reticulum) EMBV3_04751 GCCCCTCTCTCTTTTATATGCTTTCAACCTAAACTGGTAAGACAAGTGCAAAGGAATGTG Gene GeneID:540087|CRHBP:NM_001101202:39_cdna Constitutive 0 NULL GeneID:540087 10 GENE CRHBP NULL corticotropin releasing hormone binding protein EMBV3_03334 GAGGTTACTTGGGGGTCCCAGTTTCCACCTGTGATTCTTTCTACCCCAGCAATGTTGTCT Gene GeneID:785090|KRTAP15-1:XM_002684608:73_cdna Constitutive 0 NULL GeneID:785090 1 GENE KRTAP15-1 NULL keratin associated protein 15-1 EMBV3_41305 GGTCAGACTAGCTAAGTTAGATTTCCATTTCTTCCATTTGCTACTTGTGTGCTTTTGGCC Gene BVV0102_246795 + 0 NULL GK000007.2:59309662-59319660 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217269 TCONS_00217270 TCONS_00217268 1 XLOC_131476 Coding TCONS_00217269 XLOC_131476 Coding Coding LARS 7:59316353-59382166 j TSS161849 7070 1 TCONS_00217269_5 1068 0.252899575671853 31 0.893043821795417 4.28826122202298e-06 0.000220737509276843 6.56628383837996e-05 5.33914156791971e-10 0.000183269359452393 6.21477837021259e-09 9.74777280585811e-06 8.69513561949091e-05 0.000177447014110731 4.59702515106859e-05 1.96469177668954e-08 5.42857865015306e-06 1.52696023710594e-06 7.43492653821048e-129 8.58481970991039e-34 0.000891839817955223 2.11245664738392e-06 0.000678574867480809 8.63300362948537e-06 9.44581408159162e-05 1.99477479665357e-40 0.000330539767735983 0.000108526043085546 0.000384572478481464 1.76463098999546e-05 6.64830990110514e-05 5.03892670646453e-05 6.32403989732583e-13 1.32050986483002e-05 3.56022764096259e-07 XM_005209538.1 LARS PREDICTED: Bos taurus leucyl-tRNA synthetase (LARS), transcript 0.0 6239 100.00 0.489108910891089 NM_020117.9 LARS Homo sapiens leucyl-tRNA synthetase (LARS), mRNA. 0.0 4672 91.10 0.471852899575672 TCONS_00217269_5 sp|Q9P2J5|SYLC_HUMAN SYLC_HUMAN Leucine--tRNA ligase, cytoplasmic; 0.0 2042 92.86 0.995318352059925 4 coding 0 0 0 0 -0.0474964687478208 0.803741872346801 0.00133662535759526 0.977653243023399 GGCCAGGATATACCCCCGGAGGTAGTGCGCCATAGATTACCTCAGCAGGCGTGCAGTGTGTGCTTTAGTGTCGTGTTAGGCCTGGCAGTCCCGAGAGGGAGGGGAAAGATAGTAACCACTCCTTTGGGGGGATCACCGAGGTCAGTGTCGTGGATTTGCACAGTCTGCTGGGCGGCGCCATGGCGGAAAGAAAAGGAACAGCCAAAGTAGACTTTTTGAAGAAGATTGAGAAAGAAGTCCAACAAAAATGGGATGCCAAGAAGGTGTTTGAGGTCAATGCATGTAATTTAGAGAAACAGACCAGCAAGGACAAGTACTTTGTAACCTTCCCATATCCATATATGAATGGGCGCCTTCACTTGGGACACACGTTTTCTTTATCTAAATGTGAGTTTGCAGTAGGGTACCAGAGACTGAAAGGGAAGACTTGTCTGTTTCCTTTTGGTTTACACTGTACTGGAATGCCCATTAAGGCATGTGCTGATAAATTGAAAAGAGAAGTAGAGCTTTATGGTTGCCCCCCTGATTTTCCAGATGAGGAAGAGGAAGAGGAAGAAATCAATGATAAAACAGAAAATATAATAATTAAGGATAAAGCTAAAGGAAAAAAGAGTAAAGCTGCTGCTAAAGCTGGATCTTCTAAATACCAGTGGGACATTATGAAATCCCTGGGCCTTTCTGATGATGAGATAGTCAAATTTTCTGAAGCAGAACATTGGCTTGAATATTTCCCACCACTGGCTGTCCAGGATCTGAAGAGAATGGGTTTGAAGGTAGATTGGCGCCGGTCCTTCATCACCACTGATGTTAATCCTTACTATGATTCATTTGTCAGGTGGCAGTTTCTAACATTAAGAGAAAGAAGCAGAATTAAGTTTGGGAAGCGGTATACTATTTATTCTCCAAAAGATGGACAGCCTTGTATGGATCATGACAGACAAACTGGGGAGGGTGTTGGACCTCAGGAATATACTTTAATCAAGTTGAAAGTGCTTGAGCCATACCCATCCAAATTAAGTGGCTTGAAAGGGAAAAATATCTTCTTGGTAGCTGCTACTCTCAGACCTGAGACTATGTTTGGACAAACAAACTGTTGGGTTCGCCCCGATATGAAGTACATTGGATTTGAGACAATGAACGGTGATATATTCATCTGCACCCAAAGAGCTGCAAGAAATATGTCATACCAGGGCTTTACCAAGGACAATGGAGTGGTACCTGTTGTTAAAGAGTTAATGGGAGAGGATATTCTTGGTGCATCACTTTCTGCACCTTTAACGTCGTACAAGGTGATCTATGTTCTCCCAATGCTCACCATCAAGGAGGATAAAGGCACTGGTGTGGTCACAAGTGTTCCTTCCGACTCTCCTGATGATTTTGCTGCCCTCAGAGACTTGAAGAAAAAGCAAGCTTTACGAGTGAAGTATGGAATTAGAGATGACATGGTCTTGCCATTTGAACCTGTGCCAGTCATTGAAATCCCAGATTTTGGAAAGCTTTCTGCTGTAACTGTATGTGATGAGTTGAAAATTCAGAGCCAGAATGACCGAGAAAAACTTGCAGAAGCAAAGGAGAAATTGTACCTAAGAGGTTTTTATGATGGTGTAATGTTGGTGGATGGATTTAAAGGACAGAAGGTCCAAGACGTAAAGAAGACTATTAGAAACAAGATGATTGATACTGGAGATGCATATATTTACATGGAACCAGAGAAACAAGTTATATCCAGGTCTTCAGATGAATGTGTTGTGGCCCTGTGTGACCAGTGGTACTTGGATTATGGAGAAGAGAACTGGAAAAAACAGACATCCCAATGCTTGAAGAACCTGGAAACGTACTGTGAGGAGACTAGGAGGAATTTCGAAGCAACTTTAGATTGGCTACAGGAGCACGCTTGCTCGAGAACTTATGGCTTAGGTACTCGTTTGCCATGGGATGAGCAGTGGCTGATTGAATCGCTCTCTGACTCCACTATTTACATGGCATTTTACACAGTTGCACACCTGCTGCAGGGAGGTGACTTGCATGGACAAGCAGAGTCTCCGTTGGGCATCAGACCACAGCAAATGACCAAGGAAGTTTGGGATTATATTTTCTTCAAGGAAGCTCCATTTCCTAAGACTCAGATCCCAAAGGAAAAATTAGATCAGTTAAAGCAGGAATTTGAGTTCTGGTATCCTGTGGATCTTCGAGCCTCTGGCAAGGATCTTATTCCAAATCATCTTTCATATTTCCTTTATAATCATGTGGCTATGTGGCCAGAAGAATGTGATAAATGGCCTGTAGCTGTGAGAGCCAATGGACATCTCCTCCTCAACTCTGAGAAGATGTCAAAATCCACAGGCAACTTCCTCACTTTGTCCCAAGCTGTTGATAAATATTCAGCTGATGGAATGCGCTTGGCTCTAGCTGATGCTGGTGACACTGTTGAAGATGCTAACTTTGTGGAAGCCATGGCAGATGCAGGTATTCTCCGCCTATACACCTGGGTGGAATGGGTGAAAGAAATGGTTGCCAACTGGGATAGCCTAAGAAGTGGTCCTGCCAATACCTTCAATGATAAAGTTTTTGCCAGTGAAATGAATGCAGGAATTATAAAGACAGATCAAAACTATGAAAAGATGATGTTTAAAGAAGCTTTGAAAACGGGTTTTTTTGAATTTCAGGCCGCGAAAGATAAGTACCGTGAATTGGCCATAGAAGGGATGCACCGAGACCTCGTGTTCCGGTTTATTGAAGTTCAGACACTTCTCTTGGCTCCATTCTGTCCACATTTGTGTGAGCACATCTGGACACTCCTGGGAAAGCCCGACTCAATTATGACTGCTTCATGGCCTCTGGCAGGTCCTGTGGATGAAAGCTTGATACGTTCCTCACAGTACCTCATGGAAGTAGCACATGACCTTAGATTGCGACTCAAGAACTATATGATGCCTGCTAAAGGGAAGAAGACTGACAAGCAGCCCCCTGAGAAGCCTTCACATTGCACCATCTATGTGGCAAAGAACTATCCGTCTTGGCAACACATCACCCTGTCAGTTCTACGTAATCACTTTGAGAGCAATAGTGGAAAGTTGCCTGATAACAAAGTCATTGCTGGTGAACTAGGCAGTTTGCCAGAATTGAAGAAATATATGAAGAAAGTGATGCCATTTGTCGCCATGATTAAGGAAAATCTGGAGAAGATGGGACCTCATGTTCTGGATTTGCAATTAGAATTTGATGAACAGGCAGTGCTCATGGAGAACATAGTCTACCTGACCAACTCTCTTGAGCTAGAACATATAGAAGTCAAATTTGCCTCTGAAGCAGAAGATAAAGTCAGGGAAGATTGCTGTCCTGGGAAACCACTTAATGTTTTTAGAACAGAAACCTTTCCAAAGTGAAACTGATGAGATTTGACGATCCAGTGTTGGGGCCTCGGCGAGTTCCTGTCCTGGGAAAAGAGCACGCTGAAAAGACCCCCATTTCTGAGCATGCTGTTTTCCACGTGGATCTCATGAACAAGAAAATTCATCTTACTGAAAATGGGCTACGGGCAGATATTGGTGATACAATGATCTATTTAGTTCATTAAACAAAGGCACAGGAGATTTACCCTGGTTTTTGAGGATATTACTGCTATGATTGTGCCTATAGGTAGGCTCTGAGAACCTTAGGCTGGACCTAAATAGATTTAATTTCTGACCACCAAATTCTGCATGTACTTGTAACTATACCAAGTTTTCTTCAATTCCTGGACCTAATAAATTTTTTTTCCTTATTGAGGCCTCAAATAGAAATAGTTTGTACCATACTTTGTTTTTTGTTTTTGTTTTTTAACAGATGTTTGCTGTTTCCCAGAAGCTGTGAGTACTTCAGGTTAATGCAAAAGTGTCAGTATGCTTCTTGTATGAGCTGTACTTCATGTTATTTATGAGGGGTAAGGAGTAGCTAGCAACTTTTTTATTACATCCGTTATGGAGTTAGCTGTTTTTCTTTTTTAAGAAGAGTAATTAGATAATCAGTTTTCCTTTTTAAAAAGAACTCTGATGATGATTTTAAAAGAACAAATGAGAATATTTTGATTTGATTGTGATCACTCAGTATTTTGTATAAAGAACAAATAGGTCTTAAAATAATTTCTTTTAGCTTTGATATATTCAGTTAGCCACCAACAGTATTTTTTCAAGGCTAGTATTGATAATTTATAAATAGTTATTTGATTATATTAAATTTAGGTGTTTTAAAGAAGAGAATTTTTTCCGCCCTCAGAAATCTGCATTTATCAGATTTACCTTTAGTCCAGTTGTGTTTAAAGATCAAGCCAACAGTATTGCATATTTATTTTTTTTATTCTTTCTGGAATGTCTTTAGATATTGTCTGTGTCATCTCTTTTCATATGAGGAGAAAATATTAGATATTGACTGATAGCAAGAAAACAATTGCATTTCTTGAAGGATTTCATGTGGAGAAAGACCAATTCTGATAATCCTAGGAAACCTGAACTCTAACTTTCAGGTCATATGAAGAGATTTTATTGCGCTTCCTTAGTTTGCTTCATACGATTTGAGATTACAGGGCCTAGTTGAATGCTTTATTACAGATTCATTAAGACAAATCATAGAATGTTAGAACTGAACGATCCTTTAGAGATCATCAAGTACATATCATTGTTTATCTGCTAGGAGCCGGCAGCATAGTAGAGTAGATAAGATTACATGCTCTGAGGTCAGACTAGCTAAGTTAGATTTCCATTTCTTCCATTTGCTACTTGTGTGCTTTTGGCCAGTTACTCAACCCATTTCTTCATTTATAAAATGAAACTAATAATGTACCTACTTTCTAGGCTTATTGTGAGATACTCAGAGGAAACAATCGAGGAAAATCTTACATATATATTAATAGCATAGTGCCTGGCAAGTGGTAAACCTTCTGAAATGCTGCTGCTGCTGCTGACCTTCAATGATTGGTACTGAATACTACTATACAACTATATCAGGGTATAGTAGTAGTAATAATAATTGACTTAGGACTAATAGGATTACTATGGCTGATAATGATGTCATATTTGTTTGGTTCTTTTGGGGCAGCTAATTCATTTGCCTTCCATTAGATTCTTTTGTTGCTCCCTCAATCTGCATAGCTGTAGTTACTCCCTAAATCAAAGTAAGTAATCCTTCCTAAGGCCTAAACAAAGGCTACTTAGGTGTAACTTGGCAAATTAAATGAAATGTGCTTGGTCAAAAAAAGAAAAAGAAAAAGAAAGGAAAATAATTATACTATTGTGAGTGATTGTGCCTGTTTTAATAAATGAGCCTATGAACCTGTACTTCCTTGGATTACAGGTGAGTTGGGATTCATGGATTCTCTGTTCCCTCAGTCTCAATTCTAATATCTCTCTCCTAGAATAGATGTCTTGCTAGACTGAATATGTTTTTTTTGTGTTTAAAGATATGTAAGTTTTGTATAAGGAAGCCTCTAAATGTAAGCCTATTATTTTATTTGATGTGCAGCTGAAAAAAACAGCAATTAATTGAAATACTGAGGGAAAAACAAGTTGCTTTGGGCTTATTGTATTAATATCATAGGAGGTAGTTACCTTCCTAAATGAACAATGAAACAGAATTCATCAACAAAGGAAAAACCTATGTAATCACCTCACAATCAAGGAATAGCACAATGTCAGCACCTCAGAAGCCTCCACCCTTAAAGACAAACTTATGGCCCAGTGTATGAACAGTCTTTATACATGTTACATGTGAGATTTTAAAGAATGTTTATTCTGCAGTTGTGGAGTTCTGCATACGTGCATTAGGTCATAGATGCAGATTGAATTGTCCAAATCTGTATCCTACTCTTCTGTTTTCTTAGTGTACTCTCCATTTTGGAGATGTACTAAATCTCATGACCCCGGATTAATACATTTCTCTTCTAGTTCAGACAACTTTTGTTTTATATATAATATTTTATGCTGTGTTTGATGCTATATATAATATTTTGATCTATATAAAACAGTTTTTGTTTTATATATATTATGATGCTTCTGATGTTATTCAGAAAACTGAATAACAGTCTTCTTTTGGTTAGTGTTCATATAGAATATCTTTTTCTATCCATTTACTTTTAACCTTCCATAGCTTTGTGTTCTTTTTAAATTTTATTTTGCCAAATTTTAAACCTATCTAAAAGTTAAAGTAATCAGCCAGTAAACACCCATCACTGAGATTTATCAATTTTTAACATTTTGTTTCATTTGTGCTCTCTCTTTAAACATACATTTTAAAAATTTTATTTTGGGATAGTTTTAGCTTTATAGAAAAGTTGGATCTAATGTATGGAATGGAGAAGGCGATGGCACCCCACTTCATTATTCTTGCCTGGAAAATCCCATGGACAGAAGAGTCTGGTAGGCTGCAGTCCATGGGGTCGCTTAGAGTCGGGCACGACTGAGCGACTTGACTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGACACAGGAGCTTAGTGGGCTGCCATCTATGGTCGCGCAGAGTCGGACACGACTGAAACGACTTAGCAGCAGCAGCTGCAGCAATGTATGGAAAGTTCCAGTACACCCTTTATTAGTTTCCCCTAATGTTAACATTTTATGTAGCCTTGATTCAGTTGTTGCAAGTAAGTAATATTGGTACACCGCTATTAACTAAAGGCTTCATTAGGACTTTACCAGTTTTTCCACTAATGTCTTTTTGCTAATATAGGATCCTATCCATGATACCACCTTGTACTTAGAATATACTTTTTAAAAATTTTGAGCCATTTGACAGTAAGTTGCAGAAACCATGACAATTCATTTTTTAATACTTTAGCATGGAACCCCTAAGAACTAGGACATTTTCCTGTATAAAACACAGTATACACATATCTTGCCCAAGAAATGTAACATTGGACATGTATTTTATATGCACAGTATAGTTTAGCAATATTAGGTAATAAGCATTCCTAATACATGAAGTAATAAAATTTCCAAAATATCTCATCAATAAATTTTTTTCAGCATCTA EMBV3_12817 GATGTTTGTGTAGTCAGTTTGCCACCTCAAAAGTAGACAATTCCCTATCTCTAGTTGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00411 GCATCTCTTTCCCCGTCTTGTGATAACAGTAAATATTGTGGGGAGCCCATTCCCTGTGGC Gene BVT0102_102726 + 0 NULL GK000024.2:22031445-22045062 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138627 TCONS_00138625 TCONS_00138628 1 XLOC_084695 Coding TCONS_00138628 XLOC_084695 Coding Coding ZNF24 24:22026819-22037381 j TSS103844 7638 1 TCONS_00138628_3 368 0.233307148468185 4 0.277151784868857 0.000476382297823234 0.00131599473953388 0.000500980737735741 3.161665658098e-06 0.00108267057624204 0.000145603156782777 0.000702695774908782 0.00038781594098558 0.00170365087736674 0.000696841910016899 0.000148686640571983 6.5113646071718e-05 1.48134890186437e-06 4.78898733369887e-05 0.000667235223833393 0.00313765839683334 8.42233525955794e-06 0.00479402901181674 0.000256263627154021 0.00147032893872538 0.000470784370940231 0.00191153327997834 0.00103645556053246 0.0020301080270532 0.000827420024764045 0.00054490987523992 0.000839670763791004 0.000317360934175547 0.000180991039567792 0.00105554345153112 NM_001205479.1 ZNF24 Bos taurus zinc finger protein 24 (ZNF24), mRNA. 0.0 2857 100.00 0.207253207645981 XM_005258341.1 ZNF24 PREDICTED: Homo sapiens zinc finger protein 24 (ZNF24), transcript 0.0 4625 82.63 0.595574757789997 TCONS_00138628_3 sp|P17028|ZNF24_HUMAN ZNF24_HUMAN Zinc finger protein 24; 0.0 742 97.83 0.997282608695652 6 coding 1 1 1 1 0.177767329944146 0.360805371835529 0.0254408633934938 0.728118863019319 GTAACTGTGGAGATTGTGAGTCATTCAGTGTCAGCGGAAGAATCTGCATCACAAAGGTGTTAACGAGAGTTCTTTCCCCTAGAATTTGCTGATTAATGCCTGTCGTTCCTAATTTAAAGGAGTGCCTGTGAAGAAAACTGGGTATTTCCCTAAGGTATCTTGCCTTGATTGTCTTTCCTTGAAGTATTACAAATCAGGATGTCTGCACAGTCAGTGGAAGAGGATTCAATACTTATCATCCCAACTCCAGATGAAGAGGAAAAAATTCTAAGAGTGAAGTTGGAGGAGGATCCTGATGGTGAAGAGGGGTCGAGTATCCCCTGGAACCATCTTCCTGACCCGGAGGTTTTCCGCCAGAGATTCAGGCAGTTTGGATACCAGGATTCACCTGGGCCCCGGGAAGCTGTGAGCCAGCTTCGAGAACTTTGCCGTCTGTGGCTCAGGCCAGAGACACACACAAAAGAACAAATCTTGGAGCTGGTTGTACTGGAGCAGTTTGTTGCCATCCTTCCCAAGGAGCTACAGACTTGGGTTCGAGAGCATCATCCAGAGAATGGAGAGGAGGCGGTGACAGTCCTGGAGGATTTAGAGAGTGAACTAGATGACCCTGGACAGCCAGTTTCTCTTCGGCGACGAAAACGGGAAGTGTTAGTGGAGGAGATAGTATCTCAAGAAGAAGCTCAGGGATTACCGAGTTCTGAGCTTGATGCTGTGGAAAACCAGCTCAAGTGGGCATCCTGGGAGCTCCATTCCCTAAGGCACTGTGATGATGATGCTAGGACTGAAAATGGAGCTCTAGCTCCAAAGCAGGAGATTCCTTCAGCAGGAGAGTCTCATGAAGTTCCCGGCACTCTCAATATAGGTGTTCCTCAAATCTTTAAATATGGAGAAACCTGTTTCCCTAAGGGCAGATTTGAAAGAAAGAGAAATCCCTCCCGAAAGAAACAGCATATATGTGACGAATGTGGGAAACACTTCAGTCAGGGCTCAGCCCTTATTCTTCATCAGAGAATCCACAGTGGGGAGAAACCCTATGGATGTGTTGAGTGTGGGAAAGCATTCAGCAGGAGTTCCATCCTCGTGCAGCACCAGAGAGTCCATACTGGAGAAAAACCTTACAAATGTCTCGAATGTGGAAAAGCCTTTAGCCAGAATTCTGGGCTTATCAATCACCAGAGAATCCATACTGGGGAAAAACCTTATGAATGCGTTCAGTGTGGGAAATCCTATAGTCAAAGCTCAAATCTTTTTAGACATCAGCGAAGACACAATGCAGAAAAACTTCTCAATGTTGTGAAAGTTTAAGAAATTTAAAAAAAAAAGTCAGCACTCAGGTCTTTTTCTTCTGAAATGAAGACAAAATTAAAAACATGAAATGACATAGTTTTCCTATAGACTGTTAGAAAATCCACTGGGAAATGTAGAAAATCTTTACCCACTATTATTATCTTGAAAGGAATGGTGTCATACCTGCCTAGAAACTGAAATTTTAAACTTAATTCAGGTGTTAATGCCTAATCTTCCATGTGATATTTCTTATTATTTTTCCTAATGATGAGCTACCTGATCTTTGTCCCTTTGTTACAAAGTTTGCTTCTTAGACAGATACATTATTTGTGTTGGTCATCGAAATGTTCTTTGCAAGGATACATTCCCTTCTGCATTGAAAAGCAACATAAGAATTACAAAATCTGAAAACTGAAACCACTTTTTCCAAATTTACCTGTTTCCTTTTACCTAATTTGAATATGCATTTTTGAAAATAGAAGATAAAAGGTGACCAAAAACCAGAGTGAAATGAGCCTTAAAACTCAGATAAGAAGTGACGGTTGATAAAACATCAAAAAGTGACTGGGATACCTAGATTGGGGAAGACTGACAAATACTTTGATCCAATAATTGAAGTGTATCAAGAATTTATTCTAGGTATAATCTGCCTGCTGGAAAACTCAAAAATAGCTCATCCTACCTGTAATTGAGAAGCAGCCCACTCATGAAAATAATGTCTACTCATGTATCATTAGAAAGTGAACAGTTTAAACAAACAGTTGTAAAGCTTTGAAGGTAGAAATTATAACACTAGAGGAGGATCTGTAGTGAATGGCAGTGTTGAAGGGCAAATGTAAACGAGTAATGGTCTGTCTTGGCTTTTAGAAAACAAAAGACTTGAAGATCTAAGTCGTTATTTTTCTTTCACTTTTGTTGAGGACAGGAAAATCCCTGATAGGTGGGGAACAAGGTATCAGGGTTTTGATTTTACTCTTTTGGTACAAAAGGGTTGAACACCAAGCTAACAGAGCAGCCATGGGTTTATTATTAAATTTTCTACCAACAAGGCACTGTGCTAGGTACTGTAACCCTGCCACGGGTAGGTAGGTATTCTTCCACTGTAAGTCACTGGGGGTTGGTATAAAGCTGTTTCCTGTGAGTTAGCCGCTCCCCCCACCCCAATCTAAGTAGTCTTGGGGTTGGGGGGTCACCTCTGAGATTCCTAGAGCCATAGTTCTCTTACCCAGGGTGTTGTATTGGGGAAAGGAGGACTCAGCTCAAAGAGCTAGCCAGCTCGTCAGCAGTCTTCAGAGGTGAGTCCAAGATAACTATCACAGTTTGGAAGTTTATGGGTCTTTTATTAAAAAAAAAAACTAATCAATCTCTAGTAGTATTGAGGTTGTACTTAACATATTAGGTTGAATGGATTGTTCTATTTAAAAAAGAACTAGGCTATTAACAACTAGTTTATTAATCGTCAGAGTTGGTGGAGCTTTTTTTAATTTTAAGTCTTAACACATTTTTTAAAAAATGTATAAAAGTAATAACATGGTAGTAGTAGGATTATATACTCCTTGGTTGAGAATCCCAAATACTGTGGTTCTGTTTAGTGGAAAACTCTGGAAGTTAAAATATATAGAATATGAGAAAAGGCTTTTTTATAGTGGGCATAATTGTGTGAAAAATGACCCATGTGAATAAAAATATTACGTATTTCCAGAGTTTTGGGATACATCTGGTGCTTGGATCAAATTAAAAAATGGAAGGTGCGATTTGCATGAGGCTGTTAAAAAGCAGAGTAATAAATGCAAGGCTAGCTGGTGGAGAAGTGAGGCAGAATGGAGCTTGTTTATAGAATTTTTTGATAATTATAAGAAATGTGCTTTATAGATTAAGATTTATTGAAGTATAAATATGTAGTAATGATATAATGTATTTTAAGTTATACAAGAATATGTAGGGACTTTTGTTTGGGTCTTTTTCTCTTTGTGGCTAAGAGGAAACAAGTCAGAGTCCAATAAAGCTATGAATTCCTCTGCTCTAAGATAAAACGGTCTTGGGTTGATTGATTTATTTATAACTGGCTTCTTTCCAAGTAGGTTCTGAAGTGGCATATTTGGAATACTGCTGGGATGACAGAATTCTTTTATCAGAGTAGGTAAGAATGGAGTAACCTCTTGGTGGTCAGAGTTTCATGGTTTTTTAGATCTTCTGCTTTTCCTGTATACAAAGAAGCTTCCCTGTGGTACATTCGTCATAAATGCCAAAGATGTTTGGTGTAATGTGAGAACTTAGAAAAAAGTATTAGAGTTGGCAAATGTGAGTTTGTCTTGTCATCTCTGATACCTGTGTGTTGTTTAAGAAGGATTCTGAGACTAAGGCAAGGCTCTGGGGGGAAAATGGACTGGACGCCAGAAAACTGGGTGATGATACACATTAAAAGGAAATGATTGTGTACTCCCCATCTCTGGTTATCCAGTGCTCTGTGATTTCGTCTGGACTTTTCATTTATGTCCACTCAGATGATCATAGTTGGCAAATCTGGGGGGTGCCCAGCTTTTGATGAAGTGGTGATCTAGCATTGCCAAGCAGTGGCATCTGTTGGGTTTGCAAATGAGCAGTCATTATTAACAGCAAGCAGACTGCTTATGCCTGGCCAATAGCCACTGAGCACTTGCTCATTACTGCGAAATTTTCTTTTGATTTTCTTGGAGGTTGAACTCTCCACATTCACACCCAGTTGGCACTTGATCATTTAGCAGTAGGTCTGTCACATTTGTGTAAGTTGCAGGGAGGGTTCTATGTACTGAAATAATCTGCATGCCAGTCATTGGGTTAGACACTACCCATCTCCCTTAGATTTGGAGACTAGGAAAGCAAGATTTAGAGATCGCGTGACTTGCATGTGGCCAGTTAGAGCTAAAACTCAAATCTAGTTCTGTGAACTCCAGGGATGTATTTTTTTTCACAATGCAATGAATGATGGCTATTAAACCTTGATTGGTAAATTTTATGCTTTTATCTTATGGTTAGCAAATATAAAGGCTATTAAAACATACTTGTTTGACTTTTCTACAGTGCAGAAATACAAAATGAAAAAGGACATATCTTTTTATGGTCTAAATTGACAAGTAATAATTATTTGGTTTGCTCTTCTTCCAGACTTAGGCATATACATAATTAAGCAAAAACGTGTTAATAGCTGACAGTTGTCACTGTACACAGACACTGTTGGAAGCGCTTTACCATGGATTAACTCTTAATCCCCCCACCAACCATATGAGCTAGGTACATATCCCCATTTTACATGTACTGCACTGAAAATTGCCTCCTCTCCCTCCCACTTGGATGTAGACTTTTATTTTTTTATGGCTACATACTAACCCATTGAATCAATACGCTATATATAACTGGGACTTCCCAGGCAGTCCAGTGGTTAAGACTCGGCACTCCCAATGCAGGGGGCACAAGTTCAGTCCCTGATTGGGGAACTAAGATCCCACATGCCACAGCACAGCCTAAAAAAATATGCTGTAACTCGTTAGACAACCCCTACTGGTAGGTAATTTCATTAGTTCCATTTTTTTTTTTTATTACAAAGAAAGGTAGAGTTAACATCCGTATATATTTTGCTGCCTCTGTGGGTATTTCTGTAGCGTAAATAGCCAGAAGCAGATTTATTGGGTCAGGAAATGTACATATTTAACATTTGGAGAAATACCATGAGAAAAGATTGTACCACTTTGCAACTCCATCACTAGTTAAGAGTGCCTCTTTGCCTACACTCCCAACAACCCTGAATCCTTCAATGTGTTTGCTCTTTTTTTTTTGTTAATAAGGAGAATTATCTTTTTATACTTTATTTGCAAATATACTTTTTATTTCCAATTGTGAATTGCATTTTCCCATTTTTAATTATGAAAATATAAATGACTACCATCTCAGTGTACAAAATTTTATATAGGAGCGAAGAGAGACCCTTTTCTCCAGCATTTCCTATCACATTCCACTGCCCACAGTTGAGTATGCATTCATCTAATCTCCTTTCCATAATTCCCATGTGAATATGCATATACATATAAATGCCATTTTTACATAAATAGGATATATTATGTATTGTTCTGCAGCTTGCTTTTTTTTTGTCTCGAAAACCAATCCTGAGGTCTTTAAATCTCCTTAATGGTTGAATAATATTCAATACTATGAAAATACCATTATTTAACTGTTCCCTTATTTTTTCTTTTGCTATTACATTGCCAAAGTAAACATCTCTTTCTTATCTTTATGCATGTGTGTGAGTATTTTTTTAGAGTGGAGTAGAAGGTAGATTGTTGGGTCTATCAGATTGTTACCAGATTGTCTATCAGGGAACAATCTGATAGTAGACCCACCTTAGCCTTCCAAAAGGCCTTCATGACTTTCTGTTTTCACCAACTGTATGGAAAGTGCTCATTTCCCCATAAAGCTTTACCTGCACTTGATAATTTTTATCTGATGGGCAAAAAAGAGAGGATCATTTTACATTTTCCTGATTAATGGCAAGGTTGAGGTTATTTTCATATATTTATTGGCCATTTATAGTTTTATCATGGATAGTTTGTATCCTTCACCTGCTTTTCTCTTGAGTTATGTGTGGATATATGTTGTTTCTGTTCAGCATCTCTTTCCCCGTCTTGTGATAACAGTAAATATTGTGGGGAGCCCATTCCCTGTGGCTTAGGAGAGTACATTACCAGGTCAGGCCTTCCTGAGTCCCACAGCTCCTTTGCCACAGTGATTAAAGAATGGGCGTGTAACCCAAGTCAGGCTAAAGAATACCCTCAATGGAACTTCTGCTGGAACTCTTGGAAAGAACGCTCATCAGAGATCCCACGAACTAAGGACTGTGTAAGCCTGAAAATTTGTACTATGTGGAAAGAGTCTGAGGGGAAACTCAGAGGCTAGCAGAAAGGAATGAGATCTAAGTTCTAATGTCATTTTTCTGGAGGCCCTAGATCCAGCTGTGCCTAAAGCCTGCCCTACCTCTGGACTTTAACGTTTTGTGAGCCAATAAAGTCCCTTTCTTGTTTAAAATAATTGAATTGGGTTTCTGTCCTGATTAATATAGGTTGTTTGTATTTTCTTACTGATTTGTAGAAAACCTTTGTAATTTTAAATTCTAGACTTATACTTTATGCACTACATAAGTTAATAAAATTAGCATGGCCTTCCATGATGTGGCCTCTGTCAGCCTCTGCCATTTGTTACTCTACTCTTGTCTACATCACACAGCACATTCATGTACTTTAAATTCCAACAATAACTGAACACATTGGGAATGTCTATAGATAAAAAACATCACACAGTCAAGTCCTTGGCATTTCTCTTCTTATCCTTCTTACAGATTCATTAACTTGGGACCCAGACTGGGGATTACACTGCTGAGTCTATGCTGTACCCACCTCCAGCCATCACTCTTAGGGTGTTCCCCCACAAACATCCCCTATATGTGACTTGGAACTCCTTCCCATGTCCTCCATTTCCTTACCTCCCCACAATGTGGTTTTCTGGGATCCTTTTTAAAAAATTCTCAGGCCTGTGAATTTGAAGTTGCTCAGGCCCAAGACTGCCCTGGGGTTTATTGCTATTGGAAACTACAGTTGGCATTCTAGGCATGGGAACAGCAAGTATGAAGAATTTGATGTAGGAGCATTGCCTGATTTGTTCAAGAGACAAGGCCAGTGGGGCTGGAGCAGAGTGAAATGGGTGAATGTAGTGGGTGAAACCAAAGAAAGGAGTTAAGGGTGGAGAGTAGGGCCAGATCATGGGATACTTGGTTAGCCACTGGCGAGAACTATGAATGAGATGGAAAGCTCAGAGGTTTTGGGCAAAGGAGTGTAATGAGTAGGTACTGAGACTAGAATAAAGGGTCCCAACTAGTTTCTTTAAATTCGTAAAAAGTTTCTCTACATATTTTTATGTAAATCTGTAATAATATAAACTAATATATAGCTACATGAGAAAATCTTAGAAATAAAAAGCATTCCAAAAGTAACCCATGAGTCCACAATCCTAGTATTACCCCAGTAACAATTTTATGTTGTGTCTACACTTATAAAAATGCACTCTGTATACCTGTCTCTGTCTCTACTTACCATACTGTGTTTACAACAGAAAGAAAAATCTAGAAAGCAGTAAACAAAGTCCATATCTTCGTTTCTTAGTGCCACTTTTCGTCAACTGTGGATCAACTGTGCTTCTACCTGAGGCTGCCCTCTGTTGGGTCTAAGCCACCCTCAAACCTCAAAGGCATGCTCTAGTAATCCTTACCTCTTGCATTATAAAGTTTTCCTCTCTTTGAATTTTTTTGAATTAGCATGCAAATATCCT EMBV3_27513 AAGTGGACCTTCCTCTGCTCTCCATGCGCCATGTGCACCTTGAATGTCAGCTTCAGCTCT Gene GeneID:509631|WRAP53:NM_001035073:3_cdna Constitutive 0 NULL GeneID:509631 19 GENE WRAP53 MGC129046 WDR79 WD repeat containing, antisense to TP53 EMBV3_22505 CAGCCCGCCTGGAGTGCATGGTGTCTGGTGTAACAATTTCTACCACATCTGTATATTGGT Gene BVV0102_187819 - 1 EMBV3_33791 GK000004.2:83247970-83276465 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182229 1 XLOC_110799 NonCoding TCONS_00182229 XLOC_110799 NonCoding NonCoding - 4:83260778-83261308 - TSS136213 415 2 TCONS_00182229_1 57 2 0.219281663516068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000190927205501254 0 0.000665059473566573 0 0.000259930910611065 0 0 0 0 0 0 0 0 0.000140374330351633 0 XR_242089.1 TARP PREDICTED: Homo sapiens TCR gamma alternate reading frame protein (TARP), transcript variant X3, misc_RNA. 1e-78 297 78.43 0.857831325301205 0 noncoding 0 0 0 0 0.0245143656285782 0.823745414284252 -0.00273918349659305 0.968372908061696 CTGTTCCAGATGTTAACTCTGATTGTCCTCAGGGCTTTGTGTGTGTATTGTACAGGTCATCTAGAACAACCTCAAATTTCCAGTACCAAAAAGCTGTCTAGAACAGCCCGCCTGGAGTGCATGGTGTCTGGTGTAACAATTTCTACCACATCTGTATATTGGTATCAAGAAAGACCTGGTTAAGCCATACAGCGCCTGCTACACATTTTCTCTAACAACGCCATCAAAACGGAATCAGGCATTCTGTTGAGCAAGTTTGAGGCAGATATGATACCCGAAACTTCTACATCGACCCGCACTGTTTACAATGTAGGGGAACAAGACTCTGCCACCTATTACTGTGCCCTCTGGGATGTGCACGGTAGAAGACATTACAGTCACGTCATTCAATAAATGATCCTTGGGTTTTCATTCA TCONS_00182225 TCONS_00182226 TCONS_00182227 TCONS_00182228 s 3' 11838 TCONS_00182225 TCONS_00182226 TCONS_00182227 TCONS_00182228 s 3' 11838 EMBV3_04981 CAGTCTTTTTGTCTGGGACACGTCACACCTGAACCAGAGGTAAAAGCTGGAAAATACGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24426 CAGGGCTTCCCCTTCTACGACAAGCCCATGGGCATGCCGCCGATGACTCAGGCGCCCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37231 GCAAAAAGACTGAACAGAAATACACCATATGTTACCTAAGATTTTCTTGAAATCGTTGGG Gene BVV0102_449815 + 1 EMBV3_12085 GK000004.2:12767678-12944829 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19843 CAGCTGCGGGTCGCGCGTTGGAAATGCTTTGTTCTGGATGTGTTTACTGGATGCCTGTTT Gene GeneID:615865|BRD9:XM_002696451:50_cdna Constitutive 0 NULL GeneID:615865 20 GENE BRD9 NULL bromodomain containing 9 EMBV3_20925 AGCGAGAGCTCACAGAATTCCTCTCGTGCCAGAAGGATCCCGAGCTGGTTGATAAGATTA Gene GeneID:528723|S100Z:XM_002690416:101_cdna Constitutive 0 NULL GeneID:528723 10 GENE S100Z NULL S100 calcium binding protein Z EMBV3_15826 CATCAAGGCCAACACCCTGTGCATTGACAAGGAGAAGTGCATGGCGATGAGGAAGACCTT Gene GeneID:521940|TEKT5:NM_001046259:210_cdna Constitutive 0 NULL GeneID:521940 25 GENE TEKT5 MGC134582 tektin 5 EMBV3_34803 CCTCAAGTTCACCAAGAAAAGGGTGCGGACATACATCCGTGCCAAGAGGAAGAGAGAGGA Gene GeneID:522428|LOC522428:XM_002700101:230_cdna Constitutive 0 NULL GeneID:522428 X GENE LOC522428 NULL similar to mCG5564 EMBV3_24476 CACAGTGGTTTCAGATCAGGCATCTGGTAGGAAGGAACTGCTGTGTGTCGTCTGATGAAG Gene BVV0102_211906 + 0 NULL GK000004.2:4728982-5104898 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00180694 TCONS_00180692 1 XLOC_110459 Coding TCONS_00180692 XLOC_110459 Coding Coding COBL 4:4495017-4789940 j TSS135451 5073 1 TCONS_00180692_7 1248 13 0.982842921179159 5.20585831021863e-05 2.19573524494507e-10 2.60300581768737e-05 1.77838047922927e-10 2.72445826417906e-05 7.55174802585672e-11 2.06919927940272e-05 1.19671577873962e-10 2.5618441189899e-05 1.53916195150747e-05 0 0 5.96126341582995e-11 9.20106502069895e-11 2.22271904946543e-11 0.000208375999902159 0 5.12082198150442e-06 1.2832811715185e-05 7.22174970576506e-06 5.53663838646482e-11 3.72312949258544e-08 1.83862258524688e-10 3.36755742814385e-10 0.000201360201309291 0.000141306862775506 1.1609781808814e-10 1.83688612831068e-10 4.54958196085542e-06 0 XM_003582047.2 COBL PREDICTED: Bos taurus cordon-bleu WH2 repeat protein (COBL), mRNA. 0.0 9149 100.00 0.99980287798147 NM_015198.3 COBL Homo sapiens cordon-bleu WH2 repeat protein (COBL), mRNA. 0.0 2526 72.74 0.871673565937315 TCONS_00180692_7 sp|O75128|COBL_HUMAN COBL_HUMAN Protein cordon-bleu; 0.0 1397 64.49 0.999198717948718 2 coding 0 0 0 0 -0.163180884601361 0.484039358675957 0.0361127928854805 0.441618376290986 CCGCGGCGGCGACTGCGAGCGCCTGACTCGCGGGGCCCGAGCGCCGCCCGCGCCCCGCCTCGCCCGCAGACTCCATGGACGCGTTGCGAGCCTCGGCGGCCAAGCCCCCGACCGGGAGGAAGATGAAGGCTCGCGCTCCCCCGCCTCCTGGGAAGCCTGCCACCCCCAACTTGCACAGTGGACAGAGATCTCCTCGCAGAGCATCCCCCGGGCCCCCACAGAACCAGCTCAGCAGAAAGCATTCGCTGGACGACGGGGTGGTGGCCATGACCGTCGTGCTGCCCAGCGGGCTGGAGAAGAGAAGTGTGGTCAACGGGAGCCATGCGATGATGGACCTACTGGTTGAACTTTGCCTTCAGAACCACCTGAATCCCTCCAACCATGCCCTGGAGATCCGGTCTTCAGAAACCCAACAGCCTTTGAATTTTAAGCCAAATACTTTAGTTGGGACCTTGAATGTGCACACCGTATTTCTGAAAGAAAAAGTTCCTGAAGCGAAAGTTAAGCCTGTTCCCCCTAAGGTGCCTGAGAAAACGGTGCGCCTAGTGGTGAATTACCTGCGCACGCAGAAGGCGGTGGTGCGTGTGAGCCCCGAGGTGCCCCTGCAGAGCATCCTCCCGGTCATCTGCGCCAAGTGTGAGGTCAGCCCAGAGCACGTGGTGCTCCTCAGGGACAATGTGGCTGGTGAGGAGCTGGAGCTTTCCAAGTCCCTGAACGAGCTGGGGATAAAGGAGTTGTATGCCTGGGACAACAAGAGAGAAACCTTTAGAAAATCTTCACTCAGCAACGATGAGACAGACAAAGAGAAGAAAAAATTTCTGGGATTTTTCAAAGTTAATAAAAGAAGCAATAATAAGGGCTGCTTGACGACCCCGAACTCCCCGTGTGTGAATCCACGTTCTGTTATCCTGGGTCCATCCCTCTCTCTTGGCAACATCTCAGGGGTGTCGGTCAAGTCGGACCTGAAGAAGCGCCGGGCACCCCCTCCTCCAACCCTGCCCCGCGCAGGGCCACCTGTGCAAGACAAGACATCAGAAAAGATGTCTCTGGGGTCGCAGATTGACTTACAGAAGAAGAAGAGGCGGGCACCAGCTCCCCCTCCACCACAGCCCCCACCACCCAGCCCGCTGGTGCCCCCCCGCACGGAGGACAGGGAGGAGGGCAGGAAGGGCAGGACGGTGAGCCTGTCCATGGGGCCCGGCGGTCCCTGCAGTGTGGACGGGGCCCCCCCAGTGCCATCGGAGGCTGAGGAGACCGTGTCTGTCAGCAGCTGCTTTGCCTCAGAGGACACCACAGAGGACTCAGGTGTGATGAGCTCCCCCTCGGACATCGTGTCCCTGGATTCCCAGCACGACAGCATGAAATCCAAAGACAGGTGGAGCACAGACCGGGAGGACTGCAGCGACCAGGACCTGGCTGGGACGCCAGAGCCGGGCCCCCCGAAGAGCCCCTTGTGGGAGAGGAGCAGCTTTGAGAACCGGCATCTGAGAAACAGAAAAGCTGCCCCAGCCTCACACGAGGATGAGGAAATATTCATGACTGGACAGTTCCAGAAAACCCTTGCAGAACTGGATGAAGACCTGGAAGAAATGGAAGAAAGCTACGAAGCCGACACAGGCCCCCTCGCCAACTCCATACATGGCATGTCCACCCCCCATGGTGACCCTGAGGCAATCCCGGTGACGTTCATAGGGGAGGTTCTGGACGATCCCGTGGACTCAGGCGTGTTTTCCAATAGAAACAACAACGCCGGCTCCTTCGACTTGGGGAGCACAGCCGACAGTAAGGCTCAGCCACCACCTCACCAGGCCGAGTGCCCCCAGCAGCACAGCCAGAGGCGGGCAGCAGGGCCCAGCTCACCAGCTCCTTCCCGGGAGCCTGAGAGAGAGGTCAGGTCAGCCTTGACCAACACCTGGAAGGAGGTGGATCCCAGGAAGATGGAGCCCACGGCGAGTTCTGCTTCAGCGCTTCACACTCACCACTGGAATGGGAAGGAGGAAGGCAGGGCACCTGTTTCTGCTCACAGCGGGGGGACCCCAGCCCCTGGAAGGGTGATCCCACAGCTGGGGAAGGAAAAGGCAAGCGATGGTAAAGGTGATATCTCAACACTACCGCCATGGCATCAACGAGGCCAACACCCAGCGGGGAGTTATGGCCTTAAATATGGCCTCACAACTTATAAAATTGTCCCTCCGAAGTCAGAGATGAAATGCTATGACCGGGGGGCATCTCTCTCCGTGGGTGCCATTAAGATCGATGAGCTGGGGAACCTGGTGAGCCCCCACGTGCATACCGGCAGGACTGTAGTCCCCTCATCGCCCACTCTGGAGGCAGAAACCCCACCCATTGGAAAAGTCAAAGAATTCTGGAGATCCAATTCTATAGAGAAGCACTCTGGCCGGCCCATGGAGAGGCCCAAGAGGACCCCCACCCCCACCACCCCCACGAATCTGCAACCTCAGGAAAGCAGACTGAGAGGCGAGCCCACCTCCCCAGACCCCCAGGGAACACTGCCCGGGCCCCAGTCCCCACACTCGGAAGATGGGAGAGCTGTGGGGGAGGGGAGAAGCTGGCCACCCCCAGCAGCCACTCGCCCCCTCCAAGTGCCAGCAGCTAACCCCGCGGAAGTCCCGTTTCTCAAACCTCAGAGGAGAACATCCAGTCAGTACATGGCCTCTGCCATTGCCAAGCGGATAGGGACCCCAAAAGTCCACAGTGATGCGGGGAGGAGACAGGATAACACCCAGAGGACGTATGAAGGCACAGCACCAGAGCCAGTGGTAGCACCTCCTGTGGTGAAGGACAGTACCACCCCCAGCCCAAACCCAGGGACGGGCATTCGTCGTGAGGGGGAGGAATCGACGGCAGGACCCCATCCTGGATGGCAAGTCAGCAGCCCTTACAGGAAGCTGTCTGCTCAAGACTACCGGTCTGGCATCCACAGAAATTCCCATGGCTCACTAGTCACAGCTGCACAACGGGACCAGGCTTCTGTGGGACAGAGCAGTGGTCTCAGTGGAGAGCAAAACATAAGGACACACAGGACCGACTCAGCATCCGACCCCAAGTACAAGTCTGACGGCCTGAGTCCCTCACGCCTTCACTCAGGAGATGATCAGACTTCAGGCAGCACCCTGGTGAATGGCTCCCGGTGGGTCCCCATCCACAGCGAGCCTCCTTGCTCTCCAAGAGTGTCAGATACAAATGGCCGGGCTGGACAGGAGCCCCCACAACGGGAGGAAAAGCCCAGTTTGTTAAGCACAGGTGCACTTGAAGCTGATGGTACACTGCCAGCCAGCATCTTCGGGCCAAAGAAGAAATTCAGGCCTGTGGTCCAGAGGCCGGCTCCGAAAGACACATCCCTGCACAGCGCCTTGATGGAGGCCATCCACTCAGCAGGAGGCAAGGACAGGCTCCGCAAGATTCCAGAACCCGGCTCAAAGGGAGGGCCAAAGAAACCATCCTACACTGAGGCAGACGGCGAGCGCTCAGCCCTCCTGGCGGCCATACGTGGCCACAGCGGGACCTGCAGCCTGAGGAAGGTCACGTCCTCTGCCTCTGAGGAGCTCCAGAGCCTCCGCGATGCCGCGCTGTCTGCACATGGGCCAGACCCCTCGCGGGTAGAAGACCTTGGGGTCCAGTCCCAGCCGCCCCCGCCCCCACCCACTCCGGTTACCCAGGCGCCCACCTCATCCTGGTCAGCGTCGAGGTCCAGCGAGGGCCCCCTCGGCAACCCGCTGGACGCCAGACAGGCCTTGATGGACGCCATCCGCTCCGGCACCGGAGCCGCAAGGCTGAGAAAGGTGCCCTTGCTTGTGTGAGTCAGTGACAAGATGCAGTTGTGGCAGAAAACCGCCCCCAAGGGACGCCCACAGCCACCACTGATGAGCGCCAGGCCCAGGGGGCTTCAGGATTGGCCAGCTCCCCTGTCTCCAGGCCAAAACCCACCTCTGACTTCCACTCCAGCGTTGTGGTTAAAACGGATGGGGGTGCTGCTCTGCCACGTGGCTTGTGCCAAGGAAATGTATTTGCCTCTGAATATTTAAAGTTGCCAATAAACTATTCTTGTTGGCAGGTTAATGGGACTGTAAACGCTGGGCCATCACGCTTAATTACATTGACGGACAGAGTGGAAAGAATCATGCCTTAGGCCAATATTGGATCTTTGAGACTTTTACCACATGTAGATGGTTAAAACCATTTAGTTGTTGAAAATCTTTCTGAATTCTAGGGAAAGTATGTAAATGAAATAACCTGAATGTCATCTGCTACTTGATGCAAGAAGAAAGAGTTGAGAGGCTTTTTCAAATGTGACTTCACTGAGTAATGAAAGTATTATATTCTTATTATTCCTCCAACATTTGGGGTAAAAACCTCATGAAGGGCTGCAGACGGTGATCTGACCAAGTAAGCTATTAAAAGTCGACCACAGTCACCCGGAGTAACAATCAGGCAGGTCTGAGTTCTCCCGAGGTGGTGGTGACGCGTTCAGAAGGACTTGGTTGTGGACGGCATGCCCACGCGGTGTGCTGTCCCCCTGCAGGCTGTGATGTGCCGCAGGCCTCTCCCACGGAGGGCTGAGCACGGAGCCCAGAGGCTCCCCTGGGAGCCTCAGAAATCCTTCCCAGGGCAGGAAGGAGGAGACTGGGCGTCTGAAGGTCACTCCCATCAGATCACGATTGTGCTGGTGCTTCACACTGTGGGCGTGGTCTCCATGGTTTGCGCAGCAGACGGGTGGCTTGCCCAGAATCACAGCACAGGGCACTCAGTCTCCGGTATTTATCACAGATTGTCGACTACAGCTATAGAGAAAGCTCTTTAAGAGATTAATAGAAATCAAGAGGAATTCCTGAAATAAAATTTCTGTCTTAATGAAGCAACAAATATGGCGAGATCGTTTGTATGTTTCACAGTGATTTCAGATCAGGCATCTGGTAGGAAGGAACTGCTGTGTGTCGTCTGATGAAGGCCTCTCACCTTCCCTGGGCAGCGAGGGCCTCAGGCCATCACTCTTACATCACACTGTCTCCATTGTTGGTCTTCTAGTGCCACAAATAAAAGAAAGTGAAATTG EMBV3_25039 GTGAAGCAGCATCAAGCATTTGATCGAGTAGAAAGAAGGTTTCCAGTTTGCTGAGAGGAG Gene BVV0102_120087 + 0 NULL GK000004.2:105313736-105475697 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34610 CGTGTATTTTTGGACCTGGCCTCATTGCCTTGTATACCTTTAAGCAAACCAGTGGAACTC Gene GeneID:532021|PRMT10:NM_001099051:13_cdna UTR3_Alt 2 NULL GeneID:532021 17 GENE PRMT10 MGC151858 protein arginine methyltransferase 10 (putative) EMBV3_21279 TCACTGAGGAAGCCCATGCAGTATTCTTCGTGTTCTGTGCTAATGTTTTCTCTGGAAGGG Gene BVV0102_258752 + 0 NULL GK000020.2:3715173-3758357 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114264 TCONS_00114261 TCONS_00114265 TCONS_00114263 TCONS_00114260 TCONS_00114262 TCONS_00114266 1 XLOC_069246 Coding TCONS_00114261 XLOC_069246 Coding Coding STK10 20:3756975-3881011 j TSS85262 4394 1 TCONS_00114261_5 967 20 0.964735760067723 9.96565409034609e-05 0.00167793348770082 0.00172242023150853 0.00162451167045221 0.000407976274381912 0.000550963750738044 0.000125196916504499 0.000522673972243414 0.00272240917187544 0.000149401083967408 4.62358332543377e-13 0.000180000631815241 0.000152576668375566 1.79277573841408e-05 2.53962107875556e-05 0.000166456855611656 5.59993808712167e-05 0.000436135989065055 7.36645685182198e-07 0.00297052712532696 0.00133050337688223 2.97696567821982e-49 7.89518488798158e-05 7.79794952418678e-05 0.00377655963251719 0.00208280716859265 0.00179450755890056 2.08977234957946e-09 8.0885330719471e-06 0.000152730541302035 NM_001192627.1 STK10 Bos taurus serine/threonine kinase 10 (STK10), mRNA. 0.0 5364 99.67 0.682749203459263 NM_005990.3 STK10 Homo sapiens serine/threonine kinase 10 (STK10), mRNA. 0.0 3856 89.18 0.667273554847519 TCONS_00114261_5 sp|E1BK52|STK10_BOVIN STK10_BOVIN Serine/threonine-protein kinase 10; 0.0 1991 100.00 0.997931747673216 3 coding 1 0 1 1 -2.18728471970582 0.0736868822166392 -0.198611092905329 0.0592510731620692 CGCGCCACCTCGCCCCCCGGCTCGCGTGCCCCCAGCCATGGCTTTCGCCAATTTCCGCCGCATCCTGCGCCTGTCTACCTTCGAGAAGAGAAAGTCCCGCGAATATGAGCATGTCCGCCGGGACCTGGATCCCAACGAGGTGTGGGAGATCGTGGGCGAGCTGGGCGACGGTGCCTTCGGCAAGGTTTACAAGGCCAAGAACAAGGAGACGGGTGCCCTGGCCGCGGCCAAAGTAATCGAGACCAACAGCGAGGAGGAGCTGGAAGACTACATCGTGGAGATCGAGATCCTGGCCACCTGCGACCACCCCTACATCGTGAAGCTCCTAGGCGCCTACTACTATGACGGGAAGCTGTGGATTATGATCGAGTTCTGTCCTGGGGGAGCTGTGGATGCCATCATGCTGGAGCTGGACAGAGGCCTCACTGAGCCCCAGATTCAGGTGGTTTGCCGCCAGATGCTGGAAGCCCTCACCTTCCTGCATGGCAAGAAGATCATCCACCGGGACCTGAAAGCCGGCAACGTGCTCATGACCCTCGAGGGGGACATCAGGCTGGCTGACTTCGGTGTGTCTGCCAAGAATCTGAAAACTTTGCAGAAGCGAGATTCCTTCATAGGAACGCCTTACTGGATGGCCCCCGAGGTGGTGATGTGTGAGACCATGAAGGACACCCCGTACGACTACAAGGCAGACATCTGGTCGCTGGGCATCACGCTGATTGAGATGGCCCAGATCGAGCCCCCGCACCACGAGCTCAACCCCATGCGGGTGCTGCTCAAGATCGCCAAGTCCGATCCTCCCACACTGCTCTCGCCCTCTAAGTGGTCTGCAGAGTTCCGAGATTTCCTGAAGACAGCCCTGGATAAGAACCCAGAGACACGGCCCAGCGCTGCGCAGCTCCTGGAGCATCCCTTCGTCAGCAGCGTCACCAGCAACAAGGCCCTGCGGGAGCTGGTGGCCGAGGCCAAGGCTGAAGTGATGGAGGAGATTGAAGACGGCCGAGATGAGGGGGATGAGGAGGATGCGGTGGAGGCTGCCTCTCCTCTGGAGAACCACACTCGAGACTCCTCCGAGGTGAGTCAGCTGAGCATTGATGCGGACAAACTTCTCAAAGAATCACCTTTCACCCCACCACCTCCCAGCCAGCCTCAGGATGGTGCGAATGGGCCCAGCGAGCCCCCTGGGCACGGGGCCCTCCCGGCCACCAGCCCCCTGGATGTGGCCCCTGGAAACGAGAATGGCCAGGCGGTGCCTGTGCCCCTCCGGAAGTTCCGACCAGTGTCCATGGGTGCCAGAATTCAGGTGTCCGAGGAGAAGCAAGCCGCTGACCAGGGTGGAGACCTCAGTCCAGCGGCCAGCAGGTCCCAGAAAGCAAGCCAGAGCCGTCCCAACAGCAGCGCCCTGGAGACCTTGCGCAGCGAGCTGACCAATGGCAGTCTGGAGCTCCCCACCCCGGGGGCACAGAGCCTTTCCAAGAGGGACTCAGATTGTGGCAGCGTCTCCACCTCTGGGAGCACGGACTTCGGCACCTCCCTGTCAGCAGACATGTCCGTGAACAAGGAGTCGGGCTCTCTGTCCATCAAGGACTCAAGGCTGCACAATAAGACCCTGAAGAGGACACGCAAGTTTGTTGTGGATGGCGTGGAGGTGAGCATTACCACCTCCAAGATCATCAGCGAGGATGAGAAGAAGGACGAGGAGATGCGATTCCTCAGGCGCCAGGAACTCCGAGAGCTTCGGCTGCTCCAGAAAGAAGAACATCGGAATCAAACCCAACTGAGCAGCAAGCATGAGCTGCAGCTGGAGCAAATGCATAAGCGTTTTGAACAAGAAATCAACGCCAAGAAGAAGTTCTTTGACATAGAGCTGGAGAACCTGGAGCGTCAGCAAAAGCAACAAGTAGAGAAGATGGAGCAAGACCACGCGGTGCGCCGCCGGGAGGAGGCCAAGCGGATTCGCCTGGAGCAGGAGCGGGACTATGCCAAGTTCCAGGAGCAGCTCAAGCTGATGAAGAAGGAGGTGAAGAATGAGGTGGAGAAGCTCCCCCGGCAGCAGCGGAAGGAGAGCATGAAGCAGAAGATGGAGGAGCACACTCAGAAAAAGCAGCTTCTCGACCGGGACTTCCTGGCCAAGCAGAAGGAAGACCTGGAGCTGGCCATGAAGAGGATCACGGCCGACAACAGGCGGGAGATCTGCGACAAGGAGCGCGAGTGCCTCACGAGGAAGCAGGAGCTCCTTCGAGACCGGGAGGCGGCGCTGTGGGAGATGGAGGAGCATCACCTGCAGGAGAGGCACCAGCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCGGCATGAGCTGCTGCGCAAGCATGAGAAGGAGCGCGAGCAGATGCAGCGCTACAACCAGCGCATGATCGAGCAGCTGAAGGTGCGGCAGCAGCAGGAGAAGGCGCGGCTGCCCAAGATTCAGAGAAGCGAGGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTCCACATCAACGGAGGGGGCAGCGCCGCTGAGCAGCGTGAGAAGATCAAGCAGTTCTCCCAGCAGGAAGAAAAGAGGCAGAAGGCAGAGCGGCTGCAGCAGCAGCAGAAACATGAGAACCAGATGCGGGACATGTTGGCCCAGTGTGAGAGCAACATGAGTGAGCTGCAGCAGCTGCAGAATGAAAAGTGTCACCTCCTGATAGAGCACGAAACCCAGAAGCTGAAGGCCCTGGACGAAAGCCATAACCAGAACCTGAAGGAATGGCGGGACAAGCTCCGGCCGCGCAAAAAGGCTCTGGAAGAAGATCTGAACCAGAAAAAGCGAGAGCAGGAGATGTTCTTCAAGATGAACGAGGAGTCAGAGTGTGCGAATCCCACCTCCCCAAACAAGGTCACCAAGTTCTTCCCCTACAGCTCTGCGGATGCTGCTTCTTAACAGCCCCTCAGGGCTGCTCTGTGAACAAGTGATCCAGGAAGGCCACTTCCCTCCTACTTCAGGGTCCAGCCTCACACTTCAGACAGAGGCTCACAGGCACTGCACCTTCTGTTCAGGGAGAAAAAACATAAGGGAGAAATATGGAGTGCTTCTTGCCCCCAGGAACCAGACAGAAGCAAAGCTTCTGTCTCTCAGATGGAGTCCTGGGCCTTGATGCCTCAGCCGGCCCCCCAGAGGTTCCACTCCCCACAGGCTAGAGCGTATATAACCCGGTAAAGCGAATGCTCAACCCAGCATTCGACTCATCTACAAAGAAAACCTTTTTTTTTCCCATCTTTATGTCTAACTTGATATAAATGAATGTCTTCCTTAGGAAAACATCTGCTTTTTAAAAAAAAATAAATAAAAAACAACAACAACAGAAAAATATGAAGGTGACTGAGACGAGTCAAATGGGCGTACTGATTCTGGGCATGAGTTTGCTGGTGATGGGTGGTTAACACTCTGGGAAGAGTTCCTCTTTCTTCCTCTCCTATAGGTTAAGGTTAGATGTTCTGTCTTTTTACAGCAAGTCCCTGGAGTTTTCTGGGTACTCTTGTAACTGGATTTTGGGAAAGGAGGGTAACCATTCAATAGAAAAAGGGACTTGCGGTTCCACAGACTTACACACGTGGTGAAGATGCCCGAGGCCCGTGGGAAGGCACTGGTTCTCTTAGGTTAGTGAGCGCTCGGCTTGCCTGCTTCAGTATTTGACCCAGAAGGACAGTTTTCAGGTCTCCCACAGGTGAGATAAGGGAAATGATGATCCCCTTTGCCTCTCTCTGGTGCACGGGCGCTGGAGAAACATGAACTAGCAGCAGTGTAATGACAGGACACGGACGCAGTCCCACCGGGCGAGGCCAGCAGTGGCAAAGGGTCTCGCGTTGGCCGATGGCAGGGCTGATTTGGGCTTTGTTTTGTTTTTTTTGGGGGGGGGGCTTTGTTTACAACACTGCCTTCTGTAGCCTGGGGTATGAGAGAGAGTGTTAGGAGAGAGGCCCGTCTCATGGTTGAGGAGGAAGTCCTTCACGTTGGAATCTCATTCAAGGAGTTGCCGCTTTCTGTTCAGCACCGCCTGAGCCCTACTAGCTCCCCCGTCCTTTCTGGATGGGGTCCGCTTGGGTCTCCCAGGCTCACCGTTAAGCCAGTATGACGCCCCTCACTGAGGAAGCCCATGCAGTATTCTTCGTGTTCTGTGCTAATGTTTTCTCTGGAAGGGACATACGGAACTGTTTCTCTTCAGTCAGTTTTTAGCAGAGTAAATAGAACTAACTTATATTTTCCCTTTTATGGAGAAGTTATTTTTATGTAGTTTCCAAACTTTATATAAAAAACTTTTGTGAAGTGTTCTCTGCAAAGTTAACTGCAAGAATGTAAATATGCTTCTAATAAAATAACAAGGTGAGAAACTCTT EMBV3_41145 CTGAAGCTGTTGAGGAGAAGCCAGAGGGTCCTGAAGCCTTGAACCCTGACCATGATGCTT Gene GeneID:618095|LOC618095:XM_002685650:381_cdna Constitutive 0 NULL GeneID:618095 2 GENE LOC618095 NULL similar to Uncharacterized protein C2orf57 EMBV3_18830 CCTACTGTATAGCACATGGAACTCCGTTCAACATTATGTGGCAGCCTGTATGGGAGAGGG Gene BVT0102_374283 + 0 NULL GK000004.2:92620508-92624396 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184836 1 XLOC_111435 Coding TCONS_00184836 XLOC_111435 Coding Coding GCC1 4:92615130-92624245 j TSS137539 7298 1 TCONS_00184836_12 530 0.156344203891477 4 0.199692780337942 0.000628892290054831 0.000892877193283929 0.000826859373333244 0.000786402663777468 0.000997707966244098 0.000227554703606856 0.000383444940623373 0.000655224533721557 0.000563507206393743 1.69336829651013e-05 1.74827920423627e-05 0.000100741325972495 0.000126776406002864 0.000130865866126329 2.29567659888111e-05 0.00042495437625894 0.000531209212240827 0.000290927799066974 0.00132233586491276 0.00106474741466888 0.000329900877184413 1.60861878338457e-05 2.66334963578453e-06 1.79763624595303e-05 0.0010657861761679 0.00136105767079359 0.00102378045352901 1.83554637704152e-05 4.7924338535406e-06 3.18583182490985e-05 NM_001205744.1 GCC1 Bos taurus GRIP and coiled-coil domain containing 1 (GCC1), mRNA. 0.0 2883 100.00 0.218827075911209 NM_024523.5 GCC1 Homo sapiens GRIP and coiled-coil domain containing 1 (GCC1), mRNA. 0.0 2569 82.87 0.345026034530008 TCONS_00184836_12 sp|Q96CN9|GCC1_HUMAN GCC1_HUMAN GRIP and coiled-coil domain-containing protein 1; 0.0 941 92.45 0.99811320754717 0 coding 0 0 0 0 -0.193751056447122 0.222668508156425 -0.0187977688254748 0.685521992638295 GTCTTCACCAAGTCTACGGTTAGCGCGCCAGTTTCAAAGATGGAAAGGACCTGGGTCTCCCCAGGCTTCTAGCACGCCAGTCAGGTCCTTGGAACTGAACCAGCAACCCGAGCGAAGCCGAGAAAAGCCTACGACGCTCCGTAACGGCCCTCCACCCCATCTTCAGTGGCCGGTCGCCGGGCTTTGAGACTGGGTCAATGCCGCACCCAATACATTAAAACAAATGCTGGCTTGGTTGAATGGACTAACTGGTGGCTCAGTGGAGCAAGGACAGGCGTTTTGCCTATTCTGGATTCTCAGCGGGCTTCGAGGATCAATTGTGCAGTGGACACGGTGAGGTGAGCTGGGAATCAGAGAACGTTTGTTCCTTCCTTCCTTCCCGCATTAAATAAATATCTACTGAGTACCCATTAGGTGCCATTGTTCCAGGCCTCATTTCAAATACCAGTTCTGCCCCCCCCCCCCTTTTTTAGGGCTTGATTTCAACAATAAAACCTATCATTTTCTCGTCTACAAAAGGAGACTGATATCTGTCCTAATTGTCTCATGAGGTTATGGTGAAGATTAAAATGATATTAAAATGATAATGTATCTGAATGTTTTGTATGATACAACTGGATGTTATCTGGGCTACCAAGAAACTGGGTTTCAAAAGACTTCTAGTGTCTGACCATCACTGTAAAGAAAACAGATTTTGGGCGTCAAGTATCAGTGAATACGTGACTCCTATTCCTCAAAGGCTTACATTCCTAAGAAGGCTTTTACAAGATTGAAGAGCACATTTAAAAGAGTTCGAATATAATAACACAACTAGTGCTGATCAAGTTCTCTTTAGCTCTTTCAATTAGCCTTTTTTTCCTCTGTCCTAACGTCCTTATATTTTGAACTTTTAATTTTGTGTTGGGTTATAGCTGTTTAATGGTGTTGTGATAGTTTCTGGTGAACAGTGAAGGGACTCAGACATACATATACACAGAACCATTCTCCCCGAAACCCCTCTCCCATATAGGCTGCCACATAATGTTGAACGGAGTTCCATGTGCTATACAGTAGGTCCTTGTTGGTTATCCATTTTAAATACAGGGACTTTCCCAAGTGGCTTACTAGTAAAGAATGCCTGCCAAGCAGGAGACTGGAGTTCAACCCCTGAGTCAGGAAGATCCTCTCGAGAAGGAAATAGCAACCCACTCCAGGATTCTTGTCTGGGAAATCCCCTGGACAGAGGAAACCGGTGGGCTACCAGGTTGCAAAGAGTCAGTCACAACTCAGTGACTAAACAGCAGCAGCAGCAGCAGCCGTGTGTACACGTCCATCCCGAACTCCCTAACTAGCCCTACCCCTCTGGGCAACTTTAAGTTCCTTCTCTAAGTCTGTGAGTCGTTTTCCATTTTGTAAGGAAGTTCATTTGTATCATTTCTTTTTAGATTCCACATATAAGGGATGCCATACGATATTTCTCCGTCTCTTCACTTAGTATGACACTCTCTCCATGTTGCTGCAAATGGCATTATTTCATTCTTTTTAATTAGCCTCTTTACAGCCCTATTATCGTTGCTCTATTTCACTATCATCTGATCCCCATGACTGAAAATGGTCTTCTGCACTTTGGTATCTCCACCTTGTCATACAAGACTTGATGCCACTCTTGTGCTGGAAATCCTTTAGTGTCTTATAACCAAAGGTAAAATCCAAATAACTTAATTTGGGTGCTCATCTATTGTGTCAGCAGTATCTATTGCCACCTCCTTTGCATACCCTAAGCTACTGCCTTGAAATGATTCTCAATGCTTCCCAGGTGAGACAAACTCTCTGATGCTCCAGAGTCCTTGCAAGTTTTCCCTCTGCCTAGAATGTTGTTCCCCTCATTTCCAGTTAGATGGACAATCAGTACTTACCCTTCAAATTCCAATGCATTTCCCCTGAGAGCCTGTGCTATCTCCCTTAGACAGGGCTCCCTCCTCTTAACTTCTGTATCACTTTGAATATACTTGTGTTTGCATGGCTGCTGCTTCTCTAGATGTGGGCTCCTTGAGGGTAGGAACTTGTCCCTTCCTGGTTATCACCTGGCATAGCACTTGGTATGTTGAGAATCAGACTGATCTACATGGGATTCAAAACCCAAGGCTGTGTGACCTTGGTGTATTACTTCTCTGTGCCTCATGTTGCACTATCTGTAAAATAGTGCTAATGATGCTCAGCAGAATAATTATAAAGACTAAATAGCAAAACTCCTGTGAAGCTTCTGAAATATAAGTGGCACTTAGAATGGACATGATGCCTATATATATTTATTTTTATATATTTGTTAAATGAACCCAGCAGAACTCAGGAAAGATGTAATAATGATTATATTATACACCGTCTAGATGTCAAATATTGTCCTAGAAAAGGTTGTCATCTTTGTGGTCTAAATGGTAGTCTTAACTGTTGCTCTTTAAGGACAACGGTACTGAGCACCCAAACAGTGGGGCCCCGTCGTTCACCCGAGTCTTTGGTAAGGACTCATTGCGATGTCGCCCCCGTCCCTCGCTGATCTTAGCGTTAGAGCAAGATCCGGCGCCTTCACCAAACCAACATGACTCCGGTGTACTCGACTCTGCTTGCTCTGCTGTGGTGGAGTGCAACCAACGCTCGGCTGGAGAGTGACCAGTTCTCAGCCCTGCTGGGTTCTCTTCCCACCGGCCAGCTGAGGTAGCCCGCCCTGGGGGCGGGGCCCCATACGTCGCGCTCTCGTCACTTCCAGCAGACCCGGAAGCGCCGTTGTCCAGCCGCTAGAGTTAGGAAGTCGGGATGAATCTACGCTTATCTTAAACCTTTGGTCTGTAGTGCGCCGGGGGCCGGCCGGTGCTGCTGTGGCTGGGTGAGCCGGGAGCGCGGAGCGGCTTCTGGGGCAGTGCGGGCGAGCCCTGGCAGTGGGCTCCTCTCGTGCCAGCGTCGCCCCGCCTCTAGGATAGGACCCGCCCCCGTCCTCCCGCCTGGGACCTGGCAAGCATTTCTGCCGGGCTGCCCCGCCGCCCTGCATCCGGTCTCAAACAGCTGCTTGGAGCGGATGTGCTGCGGAGGGGGACAGCTATCTCCCCGTCGCATACAACCCCCACTAGCATCTTCGTGACGCTCTCCCAGGCTGTCCAAACCCTGACCTGGAGCAACCCGTCCTGAACCCTCATGGAGAAGTTTGGAATGAATTTCGGGGGCGGCCCAAGCAAGAAGGACCTGCTGGAGATCATTGAGACTCAGAAGAAGCAGCTCCTCCAGTACCAGACACGTCTCAAGGATGTAGTCCGTGCCTATAAAAGTCTGCTGAAGGAGAAAGAGGCGCTGGAGGCCAGCATTAAGGTACTGTCCGTATCCCACGAGGCGGATGTGGGCCTCGCAGGTGTGCAGCCTCAAGGCCTCACCTTTCCTGACTCTGTGGATGACCGATGCTCCACTCACAGCGAGGATAGCACAGGGACCGCCGCCAGCCTGGATACTGCGGCCAGTCTCACCAGCACCAAGGGTGAGTTCGGGATAGAAGATGACAGACTGGCCCGTGGACCACCACCTCTAAAGTTGGAAGAGGCCAGCGGGTCAGAGAGTGGCGTTAGCTGTAGTAGTGGGGACGGACCATCTGGGGGTGGGGAGGTGGACAAACGACTGCACCAGCTGAAGACTCAGTTGGCTACTTTGACCAGCTCTTTGGCTACAGTCACCCAGGAGAAGTCCCGCATGGAAGCTTCTTACCTTGATGCTGCGTGAGCTCCAGAAGCTGCTACAGGAGGAGAGGGCCCAGCGCCAGGACTTGGAGCTTCGGTTGGAAGAGACCCGGGAAGCTCTGGCCGGGCGGGCCTATGCAGCCGGTCAGATGGAAGGGTTTGAACTGCAGACCAAGCAGCTAACCCGTGAGGTGGAAGAGCTGAAAGGTGAGCTTCAGGCTCTTCGAGATGAGAAGAATCAGCCTGACCCCCGGCTGAAGGAGCTTCAAGAAGAGGCTGCCTGCCTTAAGAGCCATTTCCAGGCTCAGTTGCAGCAGGAAATGAGGAAGACAGCCGTCGCTGAGGATCAGCTGCGCCAGCAGTCGCAGTTGGAAGAGCAGAGGGTGGTGGCCCTGGAGAATCAAATATCCCAGGTGTCGGAATTGCTGGGCACCTACGAGAAGGCCAAGCAGAAGGACCAGCTGGCCATCCAGAAGCTGAAGGAGCGCATTCTGCAGCTGGACCTGGAGAACAAAACCCTGGCGCTAGCAGCCTCCAGCCGGTCCCCTCTGGACAGCCATGGAGAGGAGTCCAGTCTGGATGTCAATGTCCTGAAGGACAAGATGGAGAAGCTGAAGAGGCTGCTGCAGGTGGCGGCCAGGAAGAGCCAGGTGACCCTGGACGTGGAGAAGCTCTGCGACCTGGAGATAATGCCCAGCTCCGAGGCTGCTGATGGGGAGAAGGCCACGGCGCTCTACTACCAGCAGGAGCTGAAACAGCTGAAGGAGGAATTTGAGAGGTACAAGATGCGGGCCCAGGTGGTCCTCAAGAGCAAGAACGTCAAAGACGGGAACCTGGGCAAGGAGCTGGAGGAAGCCCGGGAGCAGCTGGCCGAGCTGAAGGAGAAGTACATCTCGCTGCGGCTGTCCTGCGAGGAGCTGGAGCGCCAGCACCAGCAGGAGGCCGAGGGCTGGAAGCAGGAGCTGGCCCGGCTGCAGCATGGCCACCGGCAGGAGCTGGAGCGGAGCCAGCTGGACTTCCGGGACCGCACACTGAAGCTGGAGGAGGAGCTGCACAAGCAGCGGGATCGGGCGCTAGCTGTGCTGGCCGAGAAGGACCTGGAGCTGGAGCAGCTGCGGTCCGTGGCCTTGTCCTCCGGGCTGCCGGGGCGCAGAAGCCCCGTGGGCGGCGCAGGCCCCAGGGACCAGGCGGACACCTCCCCCCCGGACAGCCTGACCCAAGCCCTGCAACTCGCCGCGGTCAGCGAGCCCACTTTCTTCCTGTATGCCGAGCAGCTGGCCCGCAAGGAGGTGGAGATCACGTCGCTGAGGAAGCAGAAGCACCGGCTGGAGGTGGAAGTGCATCGCCTGCGGGACCGGTTGCTGGAGGAGGGGGAGCGGCATCGGGAGGAGGTGGGAGCCCTGCAGAGCCACATTGCGAAGCACAGCCGGGACCAGAGCCGGGAGGGGGCCAACCTGGAGTACCTCAAGAACATCATCTACCGCTTCCTGACCTTGCCGGACACCCTGGGCCGCCAGCAGACGCTCACTGCCATTCTGACCATCTTGCACTTCAGTCCAGAGGAGAAGCAAGCGATCATGCGGCTGCCAGTTGGTGGTGGTTGGTGGCCCTCTGGCAAGAGATGATGCCATTTTCACTCCTCTAATTTCTGTGCCTCTTCTGTGAGAAAGGGACAGGCTCTGGTTTCTCCCACCTCTTCTCTTCTGTCACCGTCTTGTTTCTTCACTGTGTTGACCTGGGAGGAATCCTCAGTGTGGGATGGGATCTTCTGTCAAATGCCTTTAATGCCATTTTATCCTTGGGCCCCAGAGATACTGAAAGTGTTGGGACAGCATCTTCTGATGGCCTGTGCATGAAGGGAGGAGTGGGGAGAGGTTAGGATTGAGAGGTGCAAAAGTTGGGGAAGTGAGTATCTTTTAAAATAAGGTTTTTTTTTTTTTTGGTTTTAATATCCTACTCCTAGTGCAGAGCTAGGAGTACCCATGACTCCAAAGAGAGTTCATTTAATTTCTAAACACACACAAGGACCCACTGTTTACTCCATTTCATCACAATCTTGAGTCTGGCCAACTGCTGCCCCAATTCTCTGGGGACATAAATGCAGGCTGGAGAGGGACCAGGAAGTTTGAAATAGTGACAGATTGTCCCCTAGTCCAAAGGGCCCAGGGATAGTGAACTTGGGGAGTTCGTCGTGGAGCTGGGAAACTTGAAATACTTAGGGCAGGGCACGACCTAGTCCCTGTGGTTTGTCTGGACAAACCGCACCACTGTGACCATCCTGGAGAAAGCTGCACAGCAGTTGGTTCTTAGGGAGTTCTTGAGTGACCTGCTTTTGGCCTGGATAGGCTTCTGACCGCTCACACTGGTCCCTCACTGCCTTAACCTGCTGTACCGTGTTGGCTTGAGACTGTGAGTGAGTGACTTTGCTGTCTATCCCTCAATGTTGAACTCCCATTAAGAAAAAAAATCTACCTTCTTAGAGAGGTGTCTGATCAGGAAGCTCTGATCCTGCCTGGATACAAAGAATTAGCTCTGGGATTTGCACCCCCCCACCCCCCAACTAGTTGTGCTACAGAGGATTCCAGAAAGATGCTGTGACCCTCACAAGAAAGTGGTAGAAATTCAGCCGAATAGGGCTGGGGTACTTGCTACACTATGGATAGCCATCTGGCTAAACCTCCGCGTCCCTGCAGCCAAAATGTTTGTGCATTACTGTTACTAGAGTCCTTTGCCCTCACTTAGGGAGGTCATAGTGTTTCAGTCCATAAAACTCATCTTCCTCACCTGTGTTACTACTAATGGAGGGACTCAGAAAAGTTGGATTCAGACAGTATCATTTCCTTATTCTTTGCTTTCCCCCATCTGCTCTTGCTGGTTGTAGAGATCTTTGGATCCTAAAGACGGGTGCTCTGCCACAGACTAACATGTATCTTTCTGTTCTTCATCATAGTGATTGATCTGTGTTGTGAGGGTTTGGGGGTGATTAAATAATCTGATTGGGAGGCTAGGTGATCCGGACTATCTACAGTGAGCAGACTTAATGGAACAGAAGTGATGTGTTCAAGTGATAATAATGATAACCACAGAATCATTAAACTTGATCAGTTTGACCTGTTTGCTTCCCTAATGGTGTGTATATACATGCATGTATATGTCTGGACACAGTGTGAATGTAAGTGGTAAGCGAAAAGAAGGTAAGAAATACTTCATATATTAATGAACAAACTTAAATCTAGGGAGGAATACCTTAGTACTTTAACTGCCTTGGTTACAAACCAAATATTTTGGCCTGGAATTGTGTATATGTGTGTGTAGGCTGTTACACTGGCAAAAACCTTCTCATGGGTGGGCTCTAAACTTCCATAATTTCTGCTTTAAACTTTGAAAGTAATGTGCTTCTGAATGCTTTATTATATTTCCAAGTCAGTATTCATGATATCCTGGAAAAGTTTCTCGGGATATATCCTAAGTTCCTGTAGGATATGATGTTATTTCCAGGTGGTTTGAATGAAATAGAAAGATCCATAGTCACGGTTGCTTTCCTAGGACTAATGATTCTGTGCTTTTGAATTCTGAGGAGATATTAAACAAGCTAAGAGGCAA EMBV3_18611 TTGGAAAGAGATATGACACCTGCCTCCCTACCCGACAGTCAGTGAGATGGACGTTGGCAA Gene BVT0102_039025 + 0 NULL GK000021.2:25518119-25600205 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15069 AGAGGACACGCAAGCCCTGATGTACCTGAGAGGGCGACTGGAGCCAAGGTGGAAGATGCT Gene GeneID:510654|HDAC10:NM_001075460:31_cdna Constitutive 0 NULL GeneID:510654 5 GENE HDAC10 MGC139128 histone deacetylase 10 EMBV3_26125 TCAGAGTGCACAGTGGAGAACGACCTTTCAAATGCCAGACGTGCAACAAGGGCTTCACTC Gene GeneID:538384|PRDM1:XM_002690135:8_cdna UTR3_Alt 2 NULL GeneID:538384 9 GENE PRDM1 NULL PR domain containing 1, with ZNF domain EMBV3_31934 ACGGAGATGATTTCAAGTTCTTCAGGAGCTATTCCATGTTCAAGGTCAGAAGGGACGGTG Gene BVT0102_058245 + 0 NULL GK000012.2:31093214-31463868 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27117 GTTTTTTAGTAGTACGGACTTGACAGCACACTTAACCTAGGAGCCAGTCCCCTCGTTGCC Gene GeneID:615387|CDK2AP1:NM_001076369:264_cdna Constitutive 1 NULL GeneID:615387 17 GENE CDK2AP1 MGC142662 cyclin-dependent kinase 2 associated protein 1 EMBV3_15254 TTTAGTCCAAAAGGGGGAAAACCTCCAGAACCACCTGCACCGTGTGAACCTCTCTCACTT Gene GeneID:505221|KCTD3:XM_002693941:14_cdna UTR3_Alt 2 NULL GeneID:505221 16 GENE KCTD3 NULL potassium channel tetramerisation domain containing 3 EMBV3_00736 GCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGA Gene BVV0102_357928 - 0 NULL GK000008.2:102697282-102759000 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00055559 TCONS_00220566 TCONS_00030963 TCONS_00107436 TCONS_00207486 TCONS_00198905 TCONS_00210913 TCONS_00174805 TCONS_00171428 TCONS_00205125 TCONS_00174806 TCONS_00232824 TCONS_00125692 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00196822 TCONS_00123823 TCONS_00137167 TCONS_00031759 TCONS_00174808 TCONS_00174809 TCONS_00218430 TCONS_00246741 TCONS_00132066 TCONS_00174807 TCONS_00232829 23 XLOC_033367 XLOC_133883 XLOC_017212 XLOC_063346 XLOC_126002 XLOC_120558 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_124587 XLOC_142307 XLOC_077234 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_118487 XLOC_075375 XLOC_083377 XLOC_018004 XLOC_131750 XLOC_151107 XLOC_080699 XLOC_142312 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_02337 TTTGGTGAACTAGAGGAAGATGGATGAGTCGGCCCTGCTGGATCTTCTGGAGTGCCCTGT Gene GeneID:100299276|LOC100299276:XM_002689444:7_cdna Constitutive 0 NULL GeneID:100299276 8 GENE LOC100299276 NULL similar to plenty of SH3s EMBV3_21003 CCATCAGTCTGGGGGACTTTAGTTCACATTCATTATTCTATAGGCCAGGGATTCTGCCAG Gene BVT0102_123925 + 0 NULL GK000002.2:130014742-130023500 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103995 TCONS_00103997 TCONS_00103996 TCONS_00103992 1 XLOC_062265 Coding TCONS_00103997 XLOC_062265 Coding Coding - 2:130014086-130019352 - TSS77106 2014 1 TCONS_00103997_2 115 6 0.618613485280152 0.00208849990319028 0.00176764100812662 0.00372488144873145 0.000822478390263196 0.00254468154087795 0.000725150118635154 0.000673506233853386 0.00102443743774291 0.000791326108301927 0.000539458938025154 0.000330665585128849 7.45254486861706e-05 0.000153611846377442 0.000612770696598555 0.000440894081647329 1.88198517732482e-05 0.000105057813027338 0 0.00205625079244496 0.00348965966443348 0.000505009237450958 0 6.12874918021019e-06 8.35206800598808e-05 0.0024475787833968 0.00267585881357559 0.00170082430426849 5.56747255257377e-05 9.86086618476354e-07 1.54194940895961e-06 XM_005245934.1 ASAP3 PREDICTED: Homo sapiens ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 (ASAP3), transcript variant X1, mRNA. 0.0 1357 75.67 0.991559086395233 TCONS_00103997_2 sp|Q8TDY4|ASAP3_HUMAN ASAP3_HUMAN Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3; 2e-21 90.9 66.33 0.843478260869565 0 coding CTGCAGCTGGAGCAGGCCCAGGCCGGGACCCTCACCTTCCCCTTGCACTTGGACTACGCCTGGGGAATTTCCACAGAGCCTGGCTCCGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGTGCACTGAAGCCCCCAGCCCAGGCCCGCTGGACCAGTGGGAGGCTGGACATCAGCAACAAGACCTATGAGACCATCACCAGCCTGGGACCAGCTGCCCCTAAGAGCCAGAGTGAGGATTGCCCCCCACCTTTGCCGGTCAAAAACCTTTCTCGGACCATGGCCCAAGGGCGTGTGGGACATGCCAGTGGAGATCGTTCTGAAATTCCTAGCCTGAGCTCAGAGTCCCTTGGGGCCTCTGAGAACCTGAGCAGCCCAGCCTCCTCCTCCTCCAGCCTCACAAGCCCTGTGGAACCTGGGGGTCCCAATGAAACCCTACCCAGCTCTGAAGAGGGCCCCTGCGAGCCCCAAGGCCCCTCCCGCCCCAGCCTGACATCTGGAATCTCCCCTGCAGAGATGTATCCCCCAGTGAGGTTCAGCTCCGAGAGCACGCGATCCTATCGGCGAGGGGGCGGAGCCTGGAAGAGTGTCGCTCAGCCCGGCAGCCTGTACCCGGAAGGAACGTGATGGTCGGCTTCCCTGAAGGAGACGGCTCGAGGACTGGGGTTCTCCTGCCGAGCTCTGTGCAGCTTTTGCAGGACTGGCTCCTTGCTGGCCCTTGCATGCCTGAACCACCCTTGTGCTGAAGCCCAGCATTAAGAGCTAGGACTTCAGTTCACCAGACAGGAGCTGAGGTGCTCATGCCCTGGGGTCTTGCTCTTTCTGTCCCTTGTGCCTCTGTGGCTGGCCTTCCTCCTTGCTGTGAGCCCCTGCCCCTGCCAGGAACACTGGGCCCTCTGTGTTAGGGCCGACGGTGGTTTGTTTTCCTCTATCTCATACCTGCCAGGGACAAGGGAACCCTATTGTCTGGACCCTAGTGCTCCTGACTTAGCTCCAGCTGCAGAACCCTAAATCTTTCATCAGAGCAGGACTATGTTTCTTCCATCAGTCTGGGGGACTTTAGCTCACATTCATCATTCTATAGGCCAGGGATTCTGCCAGACTAGGGACTGTCTTCTCAGTCATTCATTAGCCTAGTATTCTTTGACTGAGTTCTGGCTCTTTGTCCATTCCTGAGCCAGGCACTGCAGAGGCCACAGGAATAAGATACAGGTCCTGCAGCTGAGGTCCCTTTCCCAGCAGCTGGTCCCAAGAGTTAGGCTTGGGAATGGGCAGGGCCGTTCCAGAGGATGCTTCTGGGCTCAGGGGCAGACTGACGATCAGCTGGCTTACACCCGAATGGTATTCCAGTTGTCTGCCGCCTGCATCCATCCTGGTTGGTCAATGCCCATGCTGTACTGGCTGTTAAATAAATATTCTAAATATCACTCCTTCTGAGGGACAGCACAGCCTTGCTGTGGACCTCTGCTAGATCCCCAGCAAGGAGGTAGGGTAGGGCTCACCCCCGATTTGCCTACTCTCCTTGATTTAGCCAGAAGGAAAGGCGTGGTCTAGGATGATTATCATCGTTTCTCTCCTGTTTCTCTCAGTCAGCTCAGGAGCCTTCCAGTCTTGGGGGAAGCAAAGGGCCAAGAAAGGAGAAAGGAGAGTGATAGAAATGGAGGGTGGAGACTTAAAGGTTCTGCTTCCTAGCATCAGAAATCCCACCATCGCTTTCAGGCCCATACTGGAAAACAGATACACCTACACCATCATCAGTCTCTAACACATCAGTTCTGTGGGCGCTGGGCACTGGGCCCTGGCAGGGTGGACCGGGATGAGCGAGGGCGGCTGGAAGATGCCAGTGGCCAACACAGCAGCCTGGCCAGGGAGGCTGGGCTGTTTACCTTGGAGACCCGGCCAGTCTGTGATCCCACAGGAGCAGGGTTGTCTTCAGAGCCCCCAGTGACTGGTTTTATTCATCTCAGATCTGTTATTATTTCACTCATCTCTAATAAAGGATTTTTTGGAGTAAATT TCONS_00103995 TCONS_00103995 TCONS_00103995 TCONS_00103995 TCONS_00103995 TCONS_00103995 s 5' 0 TCONS_00103995 TCONS_00103995 TCONS_00103995 TCONS_00103995 TCONS_00103995 TCONS_00103995 s 5' 0 EMBV3_26902 CAGGCAAGAGCACTGGAGTAGGGTGCCACTGCAGAATGAATTACCTCTAAATGCACCATC Gene BVT0102_056564 + 0 NULL GK000015.2:18398961-18417565 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42660 CTGCCCACAGGGACCAGTGTTCTATAAACCATGTTTCTCCCAGTGAATAGCAAAGAGACT Gene BVV0102_121327 - 0 NULL GK000011.2:69121250-69204180 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00032566 1 XLOC_018806 NonCoding TCONS_00032566 XLOC_018806 NonCoding NonCoding - 11:69200658-69201936 - TSS23565 1278 1 TCONS_00032566_1 57 1 0 0 5.50383244626403e-05 1.44820018540981e-05 0 0 0 0 0 3.08691039734267e-05 0.00100447981295171 0.000634095135563835 0.000173468281683824 0 0 0 0.00216996871353739 0.000870387184162059 0.00168843193361975 0.000112221117296326 2.25084200442737e-05 0 0.00123097118852645 0.000602989453908133 0.00090513234953131 7.04774763638546e-05 0 0 0.000631326742573885 0.000292491898891775 0.000602165102572352 NM_001002257.1 LCLAT1 Homo sapiens lysocardiolipin acyltransferase 1 (LCLAT1), transcript 4e-172 609 73.51 0.787949921752739 0 noncoding 0 0 0 0 -0.194292209882033 0.166354738972954 -0.0523834173856032 0.316851504396297 TGTAAACGCTTTGAATTCATTCCACTTTATTCTGGGATGGATACTAGAGACCACAACTCACAAACATACCAGTGAACATTGAAAACTAAGGCCATTCTGTGAGTTATTTTTAAAACCTAGTGTTTTGCACATAATGATCTTTTTTAAAAAAGTGAATTACCAAAACCAAGATTTCTCTTCTGAAATAAGAATATAAGGTCGGCATAAGACAACTTTAGGGCCATATCTAATCTGAAGCTCATCATGTGACAAGAGCATCTTTGTTTTCTACGACATAAATCACAGCCCTGAGGCAACCGCTGCCCTCAGCATCAAGTTCTCTTTTCCAGATGTCATCATAAAGTAGTACTGCCCACAGGGACCAGTGTTCTATAAACCATGTTTCTCCCAGTGAATAGCAAAGAGACTTTTACCTAAGAGACACACTGCAGGATTCTTGGAACAGGAAAAAGAAAGGGACCTGTAACTAAGGCACTGAAAGCACATTATTTATATAAAGAAATGTAAACAATTTAATACCAACAGGCTCCCACCATTAGTCTCTGTTATAAAAGTGCACAAGGGCAGCAGGGCCAGGCGCTTGAAGTCCGGGTGAGATGGGAACGTCTCCCTGGAGTCTCGGCTGCCGACGGTCAACAACGTCTGACCTGGGGCTGTGGACGTAACTCATTTCAAAGTGACTCAACAGGACTGTGTTTTAGTAGCATGACAAACAAGGAGAGGATTTTACCAAGAGTTTTAAATTATGGGCTCTGACGTTTATTTTTCTTTCGGTCTTCCACCATGTTCTTCCCCTGAATTTTACAATTCCTTTGGCTTGTTTCATCAGAGAGGCCTGGTGGGAAAACTTGCAGCCTCATCAGTGCCCTTCCTTGTAGGTTCCTATTTTAAGTGTAATAAAGCACACTCGCTGTATTGAAAACGTTTCCGAATGGGAACGATGTGACAAGTGGACACACAGCACTGTAAATATTTCAAACTCCACTGAGTTTACTTTTGATGGACTGAAAGGGCTTTAAGATGAAGGCGAGGGCCCATATGCAGCCAGACAAGGGGCTGCTGAGTCCAGAGTGAGGGTGGCAGGTGGGGAGGGGCTCCTTCCTGGGCCAAGCAGGACCGAAGCTGCATTAACCTCTACTTGACAATACTACTAATCTCTACTTGCTATCCGTTTTAGAGTCCAAACCATGGACCATATATTTCTTTAAAGAAGAGAAGAAAAAGTTGGGTAGGAAAACAAATAATTACAATTTTAAAAGAAGCCTTATTGCAACCCCC TCONS_00028207 TCONS_00028208 TCONS_00028209 TCONS_00028210 TCONS_00028211 TCONS_00028212 . 3' 207 TCONS_00028207 TCONS_00028208 TCONS_00028209 TCONS_00028210 TCONS_00028211 TCONS_00028212 . 3' 1484 EMBV3_13969 GCTTGTGAAAACTGACATTCAGATAGCCCTTCCTTCTGGGTGCTATGGAAGAGTGGCTCC Gene GeneID:507945|DUT:NM_001077873:47_cdna Constitutive 2 NULL GeneID:507945 10 GENE DUT NULL deoxyuridine triphosphatase EMBV3_26434 GTCTTTTCCTCCGTACTCACAAACTGATGTGTGAGTGAAATGACCTTACAGGGCTCTGAC Gene GeneID:768307|RHOH:NM_001078124:47_cdna Constitutive 0 NULL GeneID:768307 6 GENE RHOH MGC128679 ras homolog gene family, member H EMBV3_38320 AGCCTAGATGAAGAAACCAGCTGGGGATAGCACTAGGGTAGCCCCCATCTGCCACCATGC Gene BVT0102_437474 + 1 EMBV3_21289 GK000019.2:28238428-28274098 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36018 ACGTGCTCAGCGACCCGCGCAAGCGCGAGATCTCCCCAAAACACCCGAGAAACGCGGGGA Variant GeneID:538426|DNAJB1:NM_001033763:34_cdna 224^944 2 EMBV3_10162 GeneID:538426 7 GENE DNAJB1 MGC129124 DnaJ (Hsp40) homolog, subfamily B, member 1 EMBV3_19651 AGAGTGGGGGCAGCACATCTTTCCTTGCATCCTTCTGTCTCCATGACCAGAAAATCAGCC Gene BVV0102_019368 + 0 NULL GK000029.2:8122322-8296929 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14670 CCACCCATGGAGAATGGCCTTGTGGCTTGGTCTCTGAACATCTGGAGGAAAGCTCACTTT Gene BVV0102_084530 + 0 NULL GK000021.2:61709410-61854856 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121815 TCONS_00121816 1 XLOC_073489 Coding TCONS_00121816 XLOC_073489 Coding Coding C21H14orf49 21:61852803-61963799 = TSS90651 5192 1 TCONS_00121816_3 976 0.0637519260400616 18 0.953385287625569 2.94584507373938e-08 0 1.70114810659222e-08 1.52125382840857e-08 9.29505968448783e-09 6.61001697359289e-09 1.07060566249743e-08 1.07348106361626e-08 1.42651965399994e-08 1.66415566155577e-05 4.11655304059441e-09 6.59869868054076e-09 0 8.63800497427428e-09 4.16162792614891e-06 0.0024192461682472 0.000912186059474203 0.000463884290216754 1.35054721529684e-08 1.32196253237089e-08 5.55401342380419e-09 9.09164585787454e-05 0.000774514618518881 0.000510150417558088 0 1.31499657621804e-08 1.05192059745342e-08 0.000125798287259317 8.68621856338896e-09 1.52428978244633e-05 NM_001205869.2 C21H14orf49 Bos taurus chromosome 21 open reading frame, human C14orf49 (C21H14orf49), mRNA. 0.0 9364 100.00 0.999807395993837 XM_005267377.1 SYNE3 PREDICTED: Homo sapiens spectrin repeat containing, nuclear envelope family member 3 (SYNE3), transcript variant X2, mRNA. 0.0 3344 82.34 0.637326656394453 TCONS_00121816_3 sp|Q6ZMZ3|SYNE3_HUMAN SYNE3_HUMAN Nesprin-3; 0.0 1419 78.59 0.998975409836066 2 coding 0 0 0 0 0.00213314257913921 0.984239512782091 0.00731462661907756 0.87273932581631 GCCCGCGGCGCCGCGCTCCTGCAAGCTCCCGTCCGGCCCCCGCAGGTGCCATGACTCAGCAGCCCCAGGAGGGCTTCGACAGGAGCGTGGAGGATGCCCGCCGGTGGATGAGGGCCGTGCAGGAGCGGCTGCAGATCAATGACAACACCCAGGGGCCCCGCACGGCGCTGGAGGCCAGGCTGCGGGAGACTGAGAAAATATGCCAGCTGGAGCCAGAGGGCCGTGTGAAGGTGGATGTGGTGCTGCAGGCAGCCGAAGCCCTTTTGGCATGCTGCCACGAGGACCAGAAGACCGAGATCCTGGCTCGGCTGAGAGACATCAAGGCCCAGTGGGAGGAGACGGTCACCCACATGGTCCACTGTCACAGCCGGATCGAGTGGGTGTGGCTGCACTGGAGCGAGTACCTGCTGGCCCGGGATGAGTTCTACCGCTGGTTTCAGAAGATGACGGTGGCGCTCGCGCCCCCCGTGGAGCTGCAGTCCAGCCTGAAGGAGAAGCAGTGGCAGCTGAGCCACGCCCAGGTGCTGCTGCGCAACGCGGACCACCAGGCGGTGCTCCTGGACCGGCTGCTGGAGGAGGCGGCCTCCCTGTTCAACAGGATCGGGGACCCCAGCGTGGACGAAGATGCCCAGCAGCGGATGAAGGCTGAGTATGACGCCGTGAAGGCCAAAGCCCAGGACAGAGTGGACTTTCTGGAGCAGGTGACCCGTGAGCATGAGTGTTTCCAGGCGAGCGTGGACGAGTTCCAGTTGTGGCTGAAGGCGGTGGTGGAGCGGGTAGATGGCTGCATGGGGCGGAAGTGCCGGCTGAGCACCCAGGACCGTCTCTTGGCGCTGCAGGGCATTGCCAATGATTTTCCTAAGGGTGAGGAGTCCCTGAAGAGGCTGGAGGAGCAGGCCGTGGGGGTCACCCAGAACACCTCTCCTCTGGGTGCAGAGAAGATCACCAGAGACCTGGAGGAGATGCGGGACGTCCTGGAGAAGCTGCGTGGGCTCTGGGAGGAGGAGCAGGGAAGGTTGCGGGACCTGGTCAAGTCCAAGGGAGCCTGCGAGCAGCAGAGGGGGCAGCTGGAGGCCGAGCTGACAGAGTTCAGGAAGGACCTTCAGAGGCTGGCGGAGGAGGGCCTGGGGACCACGGCCAAGGCTGCGACCGAGGATGAGCTGGTGGCCCGCTGGAGACTCTACTTGGCAACCCGGGAGGCACTGGCCACGGAGGAGCCGCGGGTAGACCGGCTGCAGGCCCAGCTGAAGGAGCTCATCGTCTCCCTCCAGGACCCGAAGCCACTCTCGGACAGCGTGGTCGCTGCCATCCAGGAGTACCAGAGAATGAAGGCCAAGAGCAGCAGGCTGCGCAACGCCGCGGCCACGGAGCTGTGGCAGCGTTTCCAGCGGCACCCCCAGGACCTGCAGCTGTGGAGGGAGCTGGCCCAGAGACTCCTGGATGTCACCGCCAGCCTGCCAGACCCGCCCTCCATCCACACCTTCCTGCCGCAGATCGAGGCGGCCTTGACGGAGAGCTCCCGCTTGAAGGAGCAGCTGACGATGCTGCAGCTGAAGAAAGACCTGCTGGGCAGCATCTTCGGCCAGGAGAGAGCCACAGCCCTGCTGGAGGAGGTGGCGACTTCCGTGAGGGACAGAGACTTGCTGCACAACCGCCTTCTGCAGAGGAAGAGCAAACTGCAGAGCTTACTTGCTCAGCACAAAGATTTCGGGGCGACTTTCGAGCCTTTGCAGAAAAAGCTCTCAGACCTCCAAATCCGGGTCCAAGCTGAGAATGGGCTTCGGCGGGACCTTCCTGAGAAACAGGCCCAGCTTCTGAGGTTGCAGGGGCTGCAGGAGGAGGAGATGGACCTGGGGTCTCAGGTGGAGGCCATGAGGCCCCTCTTCCAGGGGAACCCTAACCACCAGCACAAAATGGACCAGCTTTCCGCTGCCCACCAGGCCCTGCAGAGGTCTCTGGAGGACCTCCTGGAAGGACGCCAGCAGAGCCTGCGGGAACACTGCACCTTCAACCACGAGCTGCTGAAGCTGCGGCATTGGATCTCTGTGATCACACAGAAGCTGGAGGCTCATCGTGGGGACACGGGCCCATGGGACGCCCAGTCCCAGGAGACTGAAGTTGAGAGACTGCTGGCTGAATTCCCGGAGAAGGAAGCCCAGCTGCTTGAGATGGAAGCGCTTGGCCGGCTGGTGATGGAGGCGTCTTCTCTGGAGGGAGCTGCTCTGGTCCAGGGGGAGCTGGAGGAGCTGACCGAGTCATGGAGGGCCTTGAGGCAGCTGGAGGAGAGCCTGCTGAGCCTCACCAGAAACCGGCAGCTGCAGAGGATGACAGAAGTGGATTCAGGGAAGAAAATGATTTTCACCAACAACATCCCAAAGACTGGGTTTCTCATCCTCCCCACGGATCTTACTTCCCGGCATCGCCGTCAGGCAGGTCTGCTCCAGGGGCAAGGAGGCAGCCATGAGGATTATTCCCAGTCCCTGAGGAACTTTGAGGACTGGTTGCAGGAGGAAAATTCCAAGCTGGTTAGGATCATTGCCATGAAAACTGCCACCGCCGAGGACTTGAGGACCAGAGCAACAAAGCTACAGGAACTGGAGGCTCGAATACCAGAAGGTCAGCATCTCTTTGAAAACCTCCTTCGTCTCAGGCCAGCCAGCGAGTCCTCGGACGAACTAGAGGATCTACGCTACCGATGGATGCTGTACAAGTCCAAGCTCAAGGACTCCAGCCACCTGCTGACGCAGAGTCCTCTAGGGGAGCCGACTGGATTCCGAAAGGCCGCGCGCTGGCGAGGGCTCAGCTCGCTCTGCCGGAAGGTATGCTGCGTGGCGCTCCCCCTGCAGCTGCTGCTGCTGCTCTTCCTGCTGCTGCTCTTCCTGCTCCCGGTCGGGGAAGAGAACCGCAGCTGCTTCCTGGCCAACAACTTCGCCCGCTCCCTCACGCTCATGCTCCGCTACGACGGGCCCCCACCCACCTAGCCCCCTTCGCCCCACCGGGGGCACTCGGGGGATGCTCTTCTCCAAAATTCCAGTTGCCCCAGCCTGGGGGACCTGGAAACAGAGGCAGGCCAGAGCCCTCTGGGCTGCATCCATGTAAATACTATATCGATGTTCTCAGAACAAAATTACTTTTTTATACAGTGTTGTCTCAGTCTATTTATACTAAATGTGTACTACGTGTGACTGAGGGGATAATGCATAGCCATTTCTTTTATATGCTCTGTATGTAAATGCTCAGTATGTATCATTTCACATATGACCTCTATTTGTCATTGGGAAAATTCCCAACAGTGTTTTTGTCCGATGGGATCTTGTAGCATTTTGGCCTTGGTCTACAGTCAGCCCTGGAAAGCAGGGACAAGAACATGTCGCTTGTATGGCCATCTCCTATCCAGAAACCAAGCCCGATGTCCAGATGTTCGTGAAGAGGTCTCTGAGCCGTCGACACGGAAGAATGGCGTTGGCCCTCGCTCAGAGCCCACTGACTCTTGGTCTAGGTACAGTCAGGACAGCCGTGCTCCTCTAGGCTTCAGAGTGACTGCAGACTAGACGCTGTGGGTGAGAAGCAGAGAAAGGGCTGATTCGGGGCTGGCCCAGGAGCAGCAGTGAAACATGGCAAGTGAGAGTGAAATTAATGGAGGAAAGAAGAACTCCAAGGAGCACACCCGGAGCTAAGCAAAGCACAGCAGAAGGGGGACTTCGGGGAGCCTGAATAGCCCAGACCAGTGAGAAAGGTCCGTGGTCTGAGTCCTCAGGGAACGGTTAGGTCATGCTGCCCATGTTCTCTGCTCTGCTTGGGAATAAAATGAAGGAGAAGGAGCTTATTGTCAAGATTCCCACGTGGAAGGATAAGCACAATGTCTGTAGCACCCAAGTGGCTGACAGTGCCGGAAAGATGTGTTACCTCCATGGCGCCGAGGCTGAGTTTTTCATCATCTACGGCTCCGGCTGAAGGGACAGAGGGAAGCATCTGACCCACCAGGGACCAGAGATGGGGGGTCCAAGACAGAGAGGAGGGGTCATCCGCAGAGCTCAGCCAGTCTGGAGGGCTCTCTCCTCCTTCCAGAAGGGACTTTGGAGAGAGCTGGGTCCTCTGGGCCATGAATGTCCCACACAGGTGCCCACAAGGGACCCAGGGTCCAGATGCCCCAAACCAAGCCCTCTCTGCAAGCGCTTGGCAGTCGGGCCCATGAGCCACCTGGGCCTTGAGGCTGGAAATATTGCATTGGCCAAAAAGTTCATTTGGGTTGTCTGTAACATCTTATGGAAAAACCAAACGAACTTTTGGGTCAACCCAATACATCCCTTCCTCCCCAGGGAGTTCTGGAATGGTTCCTGTGTTTCATCACTGGATCCTATTTTCCCCAAATCAACACTAAAGTTTCCTTTTTAAAAAATGCTTAGTGACCATTCTTTACCAATTGATTTTGTCTGTTCGGCTATGCATAGGAGACCAAGAGGGGATTCTTCAGGCCTTTGAAACCAGTGTCACAGACGCAGAAAGGCCTTTAAACAGAGGGGAAGCTGAAGACCCCGGAGGGTCCAGGCCCCCAGCACTGTGCCCCCCTCCCCCACACTGCCCTCTGGGCCTCGCAGAACTGGGAAGAGCTGGACACTCACAGGGCAGGAAAGCAGGGTCACAGAGAGGAGACCTCCAGGCTGATGTATAAAGTGAGCTTTCCTCCAGATGTTCAGAGACCAAGCCACAAGGCCATTCTCCATGGGTGGCGGCTTTCCTGGAAAATCTGGGGCTGCGTGAACCAAGACCTCCGGCCCAGGCGACTGAGCCCAGATCCTGACTGGGTTGACTGTGGCGGGGCCTTTGAACATCTCCATGCAGGTGGAGACCCAGAGAGGGGAAGTAACTTACCCAGAGCCACACAGTGGCGGCGGCTAAGGCCAGAGCCGATCCTGGTCACTGTTGCCTCTGGGTGGTGCCCGGCTCACTGTCGTGCCCCACCAAATCTGTAACTTCAAACAGGCTTGAGTGACATGAATTCAGTTGGGTCACGTGTCCTACGTATCAGGGAGGGAGAATCTGTAATGTGTGGGCTGGCGGGAGGAAATGAACATATATTTTTTAAACTTTGATACCATAGAGCTTGTTTGCATAACTTTTTTTTTTTAAAAAAAAAAGGAGAATTGATATTTTCATTACTTTCATATAAAGACAGTTGTGATATGACATAA EMBV3_13612 GGTGAAAGAGTTTGACCTGAGTTGTCTTCATTTTCATTTGGGTTTGATCTTGTGGAAGTA Gene GeneID:517402|PDHX:NM_001075751:45_cdna Constitutive 1 NULL GeneID:517402 15 GENE PDHX MGC143185 pyruvate dehydrogenase complex, component X EMBV3_03561 CTACACCCTGGTAACTGACAGCCCTCTTGACAGAGAAAGTCAAGCCGAGTACATTATCAC Gene GeneID:786553|PCDHB4:XM_002689226:79_cdna Constitutive 0 NULL GeneID:786553 7 GENE PCDHB4 NULL protocadherin beta 4 EMBV3_23543 ATGGCAGGAACTCCTCTGATGTCCTGGTTTATGTTACCAGCAACGACACTACAGTGCTGC Gene GeneID:100295130|LOC100295130:XR_083970:315_cdna Constitutive 0 NULL GeneID:100295130 19 PSEUDO LOC100295130 NULL similar to lysosomal-associated protein transmembrane 4B EMBV3_22029 ACCTCGTTCTGCCCCTTTGATCTGTACCCCAGATTTGCTGACACTTGTCTCCAGAGCCCT Gene GeneID:100295705|LOC100295705:XM_002686660:101_cdna Constitutive 0 NULL GeneID:100295705 4 GENE LOC100295705 NULL similar to cytochrome c oxidase, subunit VIc EMBV3_22849 TGGGGGCTTTCTTCACTCCATAATTCAGATTCTCATCACCATCCAATTGCCCTTCTGCGG Gene GeneID:514818|LOC514818:XM_002693718:427_cdna Constitutive 0 NULL GeneID:514818 15 GENE LOC514818 NULL similar to olfactory receptor MOR227-1 EMBV3_28931 AGTGGGCAGTTCTGTGATGTTCGACTTCAGGTTGAAAGCTGATAAGGAATTAGTCAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07449 CCTGCTCTGAAGCTCACTAAAACCATCCAGAATTTATACGACCTGGATGATGATGACGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04946 AGGAGATGCTAAAGATGACAAAGGGAAGGTGAAGGATGAGCCACAGAGGAGATCAGCACG Gene GeneID:786256|LOC786256:XM_002685031:215_cdna Constitutive 0 NULL GeneID:786256 1 GENE LOC786256 NULL similar to High mobility group nucleosomal binding domain 4 EMBV3_20032 CCCATTCCACCAGTGACTAGCTGTTTGGCATTGGGCAAGCTTCTTAACTTCTCTGCATCT Gene GeneID:529183|MAPK4:NM_001075920:137_cdna Constitutive 0 NULL GeneID:529183 24 GENE MAPK4 MGC152151 mitogen-activated protein kinase 4 EMBV3_38490 GACTCATTTAAGGAGAGCGACTTGTTCAGAAGCAATAGATGAAGAGTTATGGATCACAAA Gene BVT0102_099790 - 1 EMBV3_38133 GK000019.2:28602932-28617675 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099475 1 XLOC_059718 NonCoding TCONS_00099475 XLOC_059718 NonCoding NonCoding - 19:28612320-28613398 - TSS73851 1078 1 TCONS_00099475_1 42 0.604823747680891 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000984103220208122 0 0 0 0 1.12642762775951e-05 5.29519073465398e-07 0 0 0 0 0 0 0 0 XM_003582782.2 GCFC2 PREDICTED: Bos taurus GC-rich sequence DNA-binding factor 2 (GCFC2), mRNA. 2e-22 111 81.45 0.11317254174397 0 noncoding GTGGAGTGGTAGCATGTGAGTTCTCCCTTCTGGCCACCCAACTTCATTTAATTAAGTTAATTAATTTAATAGCTTTTGGCTACACCACAGGGTATACAGGATCTTGGTTCCTTGATCAGGGATCCAACCCATGCCCCTTGTAGTGGAAGCGGGGAGTCTTAACCACTGGACCATCAGGGAAATCCCTCAGCTTCATTTTAAATGAGGTTTCCTGGGAATTCCTTGGCAGTCCAAAGGTTAGGACCTGAGTTTTTGCTGCTGAGGCCTTGCAGGCCAGCCAAAAAAAAAAAAAAAAGAGGTTTCCTTTCTTCTGTTTCACACTTTAAATAATTATTAGAAATGGAACTGAGGAGTCAAAGTATAATATAATTCAAAGACGTGGTAAAAATTGTCAAATTCCCTTTCATAAACTGTGCCAATTTAAACTTCCTCCAGTAGCATTTGAAATTGCCTCTTGTCTCACTCACCTTGCTTGGGTATTATAAATTGGTCTTTACCCCCACTGTCCCCAATACATTCAAGAAAGTAGATGGAGAACTGGAAACAATTTTTTTAAAAAGAACTAAGTAGAAATTCTAGAATCGAAAAATATAATTCCTTAAAAAAACCACAACTCTATAGATGAGTTTAACAACAGGTTACTATTTTTATTGTTGTTGTTGATTATTTTTTGGCCACACTGTGTGGCTTGTGGGATCTTAGTTCCCTGACCAGGGATTGAATCTGTGTCACAGCAGTGAAAGTGCTGAATCCCAACCACTGGACTGCCAGGGAATTCCCAGGTTAGACATAACAGAAGACAGGATTAGTAAACTGAAAGCTAAGTGGGCAGAAAATACTCAGTCTGAAGGATGGGACTGCGTTGGGGGGGAAAGATGGAAAATACAGAAAAGAGCATAAGAGAATATGGAATGTGATGTAAAGATCTAAATACATTTAATTTGACTCATTTAAGGAGAGTGACTTATTCAGAAGCAATAGATGAAGAGTTATGGATCACAAATTTTACAGTATTAGTGAAAGACATTAAACCACAGATTCAAGAAACTCTACAAATCTCCAGCAAAATAAATACCAC TCONS_00093177 TCONS_00093178 TCONS_00093179 . 3' 901 TCONS_00093177 TCONS_00093178 TCONS_00093179 . 3' 1978 EMBV3_40540 GGGAAAGCCTCTGGGTCTAATCACTGAACAAACATTAAGCCAAGCACAGTTGATGTGCAC Gene GeneID:100125413|ZNF705A:NM_001105032:2_cdna Constitutive 0 NULL GeneID:100125413 27 GENE ZNF705A MGC160063 zinc finger protein 705A EMBV3_07745 ACGGAAGCCTCTTACGTGAACCTGCCAACCATTGCCCTGTGCAACACGGACTCTCCTCTG Gene GeneID:281898|RPSA:NM_174379:20_cdna Constitutive 2 NULL GeneID:281898 22 GENE RPSA LAMR1 ribosomal protein SA EMBV3_41185 TGCTGCATTTTCTAGTTTTAAATGTTTGATAATATTTTTTGCATCAACTGAAATTCATAG Gene GeneID:614195|C4H7orf57:NM_001079785:7_cdna Constitutive 0 NULL GeneID:614195 4 GENE C4H7orf57 C7orf57 chromosome 7 open reading frame 57 ortholog EMBV3_39540 ACTTTGGGATGCCCCTCCAGGATCTGGTTACAGCTGAGAAGCCTATACCACTGTTTGTTG Gene GeneID:788978|ARHGAP5:XM_002696718:130_cdna UTR3_Alt 2 NULL GeneID:788978 21 GENE ARHGAP5 NULL Rho GTPase activating protein 5 EMBV3_06538 GAGAAGAATCCTAGTTACTGAAGTGTATCGTGTAGGGGTGTGAATGTGTGTGTATATACG Gene GeneID:541287|RNF217:XM_002690065:30_cdna Constitutive 0 NULL GeneID:541287 9 GENE RNF217 NULL ring finger protein 217 EMBV3_19944 CAGCCTGGTGAAGTGGATTGAAGAGCCTATTGTGTGATAGGGAAAGCAGCCAGGAATTAG Gene BVV0101_031559 + 0 NULL GK000014.2:742072-949522 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35651 CCTGCCCAGATCCTGGCTGAGTTTGTGATGAAGCAAATGGCCATGGAAAAACTCAGAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04118 TGCCCTGATCGCTGTTCCAGCCAAGAGAGACAGACGACCGAAGCACTTAAAGGAAACCAA Gene BVT0102_193121 + 0 NULL GK000013.2:12536636-12576390 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044463 1 XLOC_026208 Coding TCONS_00044463 XLOC_026208 NonCoding Coding LOC100847751 13:12573171-12575504 j TSS32689 2222 2 TCONS_00044463_5 109 0.254275427542754 2 0.0480274442538593 0.000416029700224059 0.000272428923596722 0.000532710957530065 0.000430272072847917 0.000532072885439442 2.69967989764871e-05 3.91032907168007e-05 0.000176988799707232 3.14706809995202e-05 0.000115474897467771 0.000107568060949021 9.81623056838056e-05 2.1646084635092e-05 3.37273560374454e-23 0.000105614473805333 0.00135553478429988 0.000115897395201256 0.00168254011876479 0.000176698289792119 0.000159187744936838 3.64436911548112e-05 1.47665324532861e-05 0.000129942018377931 0.000702884666206755 0.000628874149288335 0.000585893648628812 0.00058418779768658 4.15827206315351e-05 7.50374571436119e-05 0.00010030597455719 XR_236866.1 ECHDC3 PREDICTED: Bos taurus enoyl CoA hydratase domain containing 3 (ECHDC3), transcript variant X2, misc_RNA. 0.0 4002 100.00 0.998199819981998 0 noncoding GTGTAATTAGTACCAAAGACAGAACCTTGAGGCTCCACCAACTGGTTCTCATTCTAAGCCAGTGGGGCAAGCAGGCCCTGGAAGGGCAGTCTCCTAGTGGATTTCTGTTGAGATTGGATTTTTTTTTCCTTGCCAGAGTCTAGAAAGGTGACAAAGAGTGTTTTCTTGGAAAGGAGAAGCTTGTTACTAAGAATGTTCCTCAGAAGAAGAGAGATCACCAGAGCCACCACCAGGACACGCCAGACCCCGATATGTCCTCATTCAGTCCCCACCAGAACCCCACTGAGTAGGGCCACCATCACCTCCAGCTTGCAGACGAGTGGTGGAGACCGGGTAGAGTGAGTGCCCCAGGCTCTGTCTGCTGATAAAGCCGTGGGTGCCCTCCCCAGCCTGCCCACCTTGTGGGGGAGCCTGGGCTGCAGTGAGGCGGGCCTGCAGACCTGCCTGCCTTCGGGCAGCCTTTCAGAACCCAGAGCTGGACCAAGCGCGCCCCCTGCTGGAGGACTTTGCAAGCTCACCGGCGACGTGGGCTTTGACTACTGGCAAACCACCAGTGTAGTTGTGTTGTTTTGCTGGGAATCTGACAAACAACGGGCTGATATTCCAGACCAGGCTGTGAAGGACTGGCCGTGATGATCTGCTCAGTAATAACGCCGCCGGCGGGGCCCCTTCGGGTTCCCCGCCGTGGGGGTCATTGTGCGGCCATCTCAGACCCCACAGTGAGGAGAGCAAAACCTTCTCCCACGTCCCAGTGAAAACCAAAAGTTGCCTTTCCAGTTTCTGTACGCGCTGCACCATAGCTTCCAACCAGGAAATTCTCAGGCCTCCAGGCTGACTTCCCAGCCTGCGAGCTGAAGTGCCCTCGGGGGACGCGCTATAAATCCTAATAATCGTCGGAGCGGAAAATAATCCTGGAATAAAACCTGCTACCCAACCATCAGTGTCACATAATTCATCCCCAAGGCAGATATAAATTGGGGGTTAATTTGCATCTCTGCCTCCTTCCACTGAGACAGTGAATGAAAGCTCTCTGGTTGGCACACACGACGACCGCTTTTGGAAAGCGTGTGTTCACCTTTCCTTCTGCACCATCCGCTGCTCAGGGAGCTTCTCTGAGCTCAGTGGTCCCCACGCCGGGAGGGGACGGGGCTGGAAAGTCAGTGAAAGGGGCATCTGCTCCGGCCCGGCCTGAGCCCCCGAGAAAACAGCGCGGATACGTCGTTAATTTCCCTGCAGCGACTGAGCGGAGACCCACCAGATACGCTGCGCCAGGCTAACCTAGGAAGGAGCTCTCTGCTGCCCTGATCGCTGTTCCAGCCAAGAGAGACAGACGACCGAAGCACTCAAAGGAAACCAATCAGAAACTGCCAAGCCGCAGCAACACAGCTTTGCTTACCAAGGGAATTCCAAGGAAAACACAGGTTTGACCTCAAAGAACACCAAGTTCGAGTCCCAGGTTTGCCACGAACCAGCCGTGTGATGGTGCGGGTGACCGGGCCTCTTTCAGCGCCAGGTCCCCTTCTGTAAAAATGCCGCGTGGACCCTTTTGTCCTCCTGGTTGTGACATTGTGGATTCTGCAGCACTGGATCGGAAACTTAGAACAAGACTGGAAAACAGGTAGCTTTGCCCAAAGAAAATGCTCTTTTACAAATGGAGATGGATTTTCCCCTGGAAGTGGTGAAGAGTGAAAACACCTGATTACCCTGGAGAACAAGAAGCATCACAGATCCTCCCTTCTTGGGAGCCACACCTGAGCCTTTTAAAGGCGTCCGGCTAGCATGGGGGGCAGAGCTCTATCGAAACTGACTATCACCCTAGTTTTGTCTGCTGGTGGTTTAGTCACTAAGTCGTGTCTGACTCTTGCAACTCCATGGACTATGGCATGCCAGCCTCTTCTGTCCCGTGTCCATGAGATTTCCCCAGGGAAGAATACTGGAGGGGATTGCCATTCCCTTCTCCAGGGGATCTTCCCAACCCAGGGATCTAACCTGGGTCTCCTACATTGCAGGCAGATTCTTTACCGACTAATCCACCAGGGGAGTCTGATTTTGTCTAGGGGCCCCCCTTTCCTCTCTGCTTTCTGCAAACCCACTGCACTAAGCTTTTAAATTGTTTTTAAATATTTGATTAATGAATGAGTATTCTTTCCTTGCAGTCATCAAGAGGCCAGAGTTGGTTGAAGTTGACTTGTTACCATTAATAAATTTGTGAAATTTCAGTC EMBV3_18488 GACTCTGGTCTGAAAAGATAAAAGAATGTTATGGAAACTACATGGAATATTTGAAGTCCC Gene GeneID:768310|FUSIP1:NM_001078126:305_cdna Constitutive 4 NULL GeneID:768310 2 GENE FUSIP1 MGC128430 FUS interacting protein (serine/arginine-rich) 1 EMBV3_06225 CTGCCATCATCAGTATCCCCACCCCTCCTGCCAACACCCCAGATGAGAGCCAACCTTCCT Gene GeneID:518384|KCND1:NM_001024553:75_cdna Constitutive 0 NULL GeneID:518384 X GENE KCND1 NULL potassium voltage-gated channel, Shal-related subfamily, member 1 EMBV3_34947 CTGGTGTTTTTCCCGCATCTGGATAGAACTAGTGACATCAGGAACATCTGCTCGGTGGAC Gene GeneID:524343|EXOG:XM_002696945:522_cdna Constitutive 0 NULL GeneID:524343 22 GENE EXOG ENDOGL1 endo/exonuclease (5'-3'), endonuclease G-like EMBV3_16865 TGTCACTGGGAGTTGTACCCACACCTCAGGGTCCCCCAACTACAGATACCCTAATGAAGA Gene GeneID:508880|GTPBP5:NM_001014874:964_cdna Constitutive 0 NULL GeneID:508880 13 GENE GTPBP5 NULL GTP binding protein 5 (putative) EMBV3_26217 TGCCTGCAAATCCCATGTGCCGTGTTTCCTTGACTCTAAGACATAGTCAACTCAAAGTGG Gene GeneID:613695|C9H6ORF203:NM_001102267:62_cdna UTR3_Alt 3 NULL GeneID:613695 9 GENE C9H6ORF203 MGC151851 chromosome 6 open reading frame 203 ortholog EMBV3_42937 CTGATTTTCCCCTGACCGCCCACATGTTAGAAACGTATTTACAACTACAGCCAGGACCGC Gene GeneID:100294952|LOC100294952:XM_002691402:349_cdna Constitutive 0 NULL GeneID:100294952 11 GENE LOC100294952 NULL similar to pre-B lymphocyte 3 EMBV3_26347 CATCAACACTGCTGTTTCTGACACTTAGACATCCCACGCAAAGCCACTTTGAATTTTTGC Gene GeneID:508179|PPIL1:NM_001014869:20_cdna Constitutive 1 NULL GeneID:508179 23 GENE PPIL1 NULL peptidylprolyl isomerase (cyclophilin)-like 1 EMBV3_33819 ACGCGTTGCGCCTCAGCACTTCCTACCGAGATGGTGTAAAGACGTGATCAGAAATATGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25120 GGGTTCTGAGGCAAGGTAGGAAGCATAGCTGTATTTCAGGCTCCATTAGGTGTGGATCAG Gene GeneID:539141|PSMA2:NM_001034662:58_cdna UTR3_Alt 5 NULL GeneID:539141 4 GENE PSMA2 MGC127174 proteasome (prosome, macropain) subunit, alpha type, 2 EMBV3_30873 CAGTCTACTTTGCCGAGGTGGATGAGCCAGAGTCCCATTTCTCTAGCATTCCTGATGGCT Gene GeneID:538721|KCNA10:XM_002686147:264_cdna Constitutive 0 NULL GeneID:538721 3 GENE KCNA10 NULL potassium voltage-gated channel, shaker-related subfamily, member 10 EMBV3_04303 CACGTGTCCGGAACCTCAACAAGGTAACTGGCTTCCTTTACAGACCCCTTATTTTAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32581 CTGGCGGCCATCGGTGCGGACCTGAGCAAGGAAATGCTGTGATTATCAAGCCTTCCGAAG Variant GeneID:513967|ALDH3A2:NM_001101984:30_cdna 223^454 3 EMBV3_42911 GeneID:513967 19 GENE ALDH3A2 MGC166026 aldehyde dehydrogenase 3 family, member A2 EMBV3_37648 CTGTCCTGCTTCTCACTTGACATTGTATCATGAGTATTTTTCCAGGTCAGTAAAAATCAA Gene GeneID:541014|LOC541014:NM_001034721:208_cdna Constitutive 1 NULL GeneID:541014 22 GENE LOC541014 MGC128724 hypothetical protein LOC541014 EMBV3_21524 TACACTGGCCTTGTCACCTTTGGGTGGTCCTGTGGGTTCATTCTCTTCCTAACCCCTGTT Gene GeneID:784214|LOC784214:XM_002690672:253_cdna Constitutive 0 NULL GeneID:784214 10 GENE LOC784214 NULL similar to olfactory receptor, family 11, subfamily G, member 2 EMBV3_16896 GCATAGCATGATGAGATGTGACTAAGAAATAGCATTCTGGATAAAGGGGCTGATATACGT Gene BVT0102_312221 + 0 NULL GK000004.2:40830620-41064512 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43455 CCAGAAACAAACGCTCTATATAAGTGATCATACCACCACGAGGGCATGACTCTGGGACTC Gene BVT0102_132637 + 0 NULL GK000022.2:51610547-51617497 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131431 1 XLOC_080136 NonCoding TCONS_00131431 XLOC_080136 NonCoding NonCoding - 22:51614907-51615408 - TSS98298 501 2 TCONS_00131431_1 43 0.984031936127745 1 0 0 0 0 0 0 0 0 0 0 2.46376754228221e-05 0 0 0 0 0 0 0 0.0120696808991391 0 0 0 0 0 3.34623939658505e-05 0 0 0 0 0 0 XR_227355.1 LOC101903470 PREDICTED: Bos taurus uncharacterized LOC101903470 (LOC101903470), 7e-63 244 73.65 0.860279441117764 0 noncoding 0 0 0 0 -0.155920114987006 0.337888296310752 -0.0335096367401607 0.556993333358952 GGGGCAGTGAGAGCACCAAATCCTAGCTGCCAGACCAGTGGTCAGTGACAAGGCCCTGGCTCTTCGCTTTGCAGAAAAAGAACTGCTGTAAAGACGGAAAGTAGTGAGAGAAGTCAAGTGTTTATTAGGAGGAAAAAAAAGAGTACGTATGGATAGACACATGGGTGGACTCAGAGTCCCAGAGTCATGCCCTCGTGGTGGTATGATCACTTATATAGAGCGTTTGTTTCTGGGTTTCCTTTGTCCAACCATTTTGATTTCCCTGGCTCAGAGTCCATAATTGGTGTACCTTAGGATCCTCTTATATGTGCACACACGTCTCAGCTAAGGCAGATTCTACATTAGAGGTGTAGAGGTAGTTAGCATCACCTAGCATCACTCCCCCTTTTGACCTCCAAGGAGCCTTTCTGTGCATGTGTAGTCAGGGAGGTCACCTTACTTCAAAAATGAGAAATAAGTGGCCTCTCCTCTGGAGGCAGAGCCCAGCCTCCTCCCTCAATT TCONS_00127260 TCONS_00127261 TCONS_00127262 TCONS_00127263 TCONS_00127264 . 5' 2090 TCONS_00127260 TCONS_00127261 TCONS_00127262 TCONS_00127263 TCONS_00127264 . 5' 2090 EMBV3_36324 AGATTTCAAGTAGCCGAGAGAGTCCCCCTGTGAGAGCCAAAAAGCCTCGTAAAGCCAGGA Gene GeneID:539708|BARHL2:XM_002686236:254_cdna Constitutive 0 NULL GeneID:539708 3 GENE BARHL2 NULL BarH-like homeobox 2 EMBV3_07983 AATTCGTAAGACTGGGTGAGGAACCGTCTTCCACAGAGACCCATCCCCAGAAAGTGGGCT Gene GeneID:100125303|GRTP1:NM_001103336:20_cdna Constitutive 1 NULL GeneID:100125303 12 GENE GRTP1 MGC159770 growth hormone regulated TBC protein 1 EMBV3_22229 CTGCTTCTTGGTATATATTCAGATAAACTTTTACATTGGTGCAAGAATCCATGTGCCAGC Gene BVV0102_107023 + 1 EMBV3_43748 GK000007.2:24436630-24487318 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33875 GCCCCACCTCCCACCCCAGCTCCTGCAACAGCGTCCTCTGGTATCACGATTCCAAAACCC Variant GeneID:540910|SMARCE1:NM_001099116:204_cdna 142^246 3 EMBV3_38463 GeneID:540910 19 GENE SMARCE1 MGC152620 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 EMBV3_39792 CCCTCCAGCAGGACTCTACCTCGCTTCTCAAGCCCCAAGCTGATAAGAGAAACTCAAGTT Gene GeneID:617847|LOC617847:XM_002691610:245_cdna Constitutive 0 NULL GeneID:617847 11 GENE LOC617847 NULL hypothetical LOC617847 EMBV3_35639 ATTGTTCAGCCAATTATCAGCAAACTCTATGGAAGTGCAGGCCCTCCCCCAACCAGTGAG Gene GeneID:415113|HSPA5:NM_001075148:8_cdna Constitutive 0 NULL GeneID:415113 11 GENE HSPA5 grp78 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) EMBV3_30963 TGCCCCTACGTGCACAACGTCACGCGCAAGAGCCATGTCCCAAGTGTGAACATCCTCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15094 GAACCAAGAGTTATAAATCAGATGTTGGAGTTATTCAAGTCATGCTAAGAAAGCTACTGT Variant GeneID:532936|AK6:NM_001075975:90_cdna 477^520 2 EMBV3_14790 GeneID:532936 20 GENE AK6 MGC139662 MGC159662 TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa EMBV3_12310 GAGAAGTCCATCCTGATGCTTTTCGTCTGGGCGATGTGCGCGCTGTCTTTCCTACTTACT Gene GeneID:522234|GJD4:XM_002692074:198_cdna Constitutive 0 NULL GeneID:522234 13 GENE GJD4 NULL gap junction protein, delta 4, 40.1kDa EMBV3_32017 GCCGGTGTGCTGACCATTTCCCTACCTGTGCCAGTCATTGTCTCCAACTTCAGCTACTTT Gene GeneID:540492|KCNA7:XM_002695203:904_cdna Constitutive 0 NULL GeneID:540492 18 GENE KCNA7 NULL potassium voltage-gated channel, shaker-related subfamily, member 7 EMBV3_00333 CTTCTCCGAGAACTTTCTGCTCAGCCAGAGGAATTGACTCCGAAGGCCATGCAGCTAACT Variant GeneID:530577|SACM1L:NM_001102131:134_cdna 649^784 3 EMBV3_30133 GeneID:530577 22 GENE SACM1L MGC159686 SAC1 suppressor of actin mutations 1-like (yeast) EMBV3_15727 AGAACAGACATCCGAGGAACATTCCAGTCTATAAAAATCCACATTCTTCTCGACAAGGAC Gene BVV0101_033959 + 0 NULL GK000003.2:10400203-10461571 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22574 GCTACGTGCGAATGAGGAAAACACTCCAGTTCAGGGAGAGGAACTATGGCCTTTTCAAGC Gene GeneID:515976|CCRL2:NM_001075732:122_cdna Constitutive 0 NULL GeneID:515976 22 GENE CCRL2 MGC152147 chemokine (C-C motif) receptor-like 2 EMBV3_39232 TTCGAGTTGCTGGTAGAAAGCCGGATCAAGGAGGAAATGCAGGCCTTTCCGGAGAAGTTC Gene GeneID:789063|PSMG4:XM_002697605:88_cdna Constitutive 1 NULL GeneID:789063 23 GENE PSMG4 NULL proteasome (prosome, macropain) assembly chaperone 4 EMBV3_12045 TGTATAACAAATCCGACTTCGGAGACACCCAAATGATTGCCCCTCATTGATAGCCTTAAC Gene GeneID:508613|MGC140754:XM_002686900:90_cdna UTR3_Alt 2 NULL GeneID:508613 4 GENE MGC140754 NULL hypothetical LOC508613 EMBV3_04604 CAGCAGCTCCAGACTTTCTTCCATAAACACCTGGGTGGGGAAAAGGGGAGAATTCCAGCA Gene GeneID:511033|ACOT2:NM_001101938:88_cdna Constitutive 0 NULL GeneID:511033 10 GENE ACOT2 MGC152576 acyl-CoA thioesterase 2 EMBV3_25219 GACCACAGCTGGGCTTTGGAAGGTCTTGGTTATCACCTCCTTCTGCCTCATTTCCTTAAC Gene BVT0102_129196 + 0 NULL GK000021.2:6924124-7009840 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118623 TCONS_00120435 TCONS_00120431 TCONS_00120433 TCONS_00120432 TCONS_00120434 TCONS_00118622 2 XLOC_072671 XLOC_073170 Coding TCONS_00118622 XLOC_072671 Coding Coding - 21:7006034-7008024 - TSS89024 672 1 TCONS_00118622_2 110 2 0.663147310206134 0.0188992128163773 0.00669833904793551 0.0085555214645076 0.00759023994634655 0.00779704985324589 0.00343112295963465 0.0039138862850199 0.00959047755990835 0.00962790301023144 0.000791271060732705 0.00059859194592828 5.29651521782432e-05 0.00180346293776228 0.00467607057614699 0.00451987009907463 0.0003751114338926 3.66826251716168e-08 0.00109484232105888 0.01227750583036 0.0268921661600762 0.00534244626365472 0.000437665218559932 0.000253148561251479 8.64122951445207e-08 0.0180703218856686 0.0111932032894541 0.0060468588339896 1.29014779533973e-10 2.52093216708159e-76 0.000466906444245918 XM_005221769.1 LOC101907268 PREDICTED: Bos taurus lysM and putative peptidoglycan-binding domain-containing protein 4-like (LOC101907268), mRNA. 0.0 1146 100.00 0.943452380952381 NM_001284417.1 LYSMD4 Homo sapiens LysM, putative peptidoglycan-binding, domain containing 4 (LYSMD4), transcript variant 2, mRNA. 1e-93 347 83.59 0.486607142857143 TCONS_00118622_2 sp|Q5XG99|LYSM4_HUMAN LYSM4_HUMAN LysM and putative peptidoglycan-binding domain-containing protein 4; 7e-46 153 76.29 0.872727272727273 0 coding 0 0 0 0 -0.352423778301086 0.113479498432375 -0.024782975840396 0.694031508140345 ACCTCGCCGTTCCCGCCCCCAGACACCAGCTGATTTCCGCAGCCAATCGGCAGGCGCGGCGGCGGCGGGTCTCGGGGATCCCGGATGCTGAGTTAAGGAAATGAGGCAGAAGGAGGTGATAACCAAGACCTTCCAAAGCCCAGCTGTGGTCTGTAGGACTCCGACCAGCCACGTTTACATGTTTGAAAATGGTGTTGAGGACTCCGAGGACTCCTCTGAGGAAGAGTCCCACCGAGTGGCCCTGCGGCCCCGGGGCAAGGAGGGCCAGAAGAAGGGTGCCCACCACCCTCACCGGCCAGGAGCAGGGGATGTGGTGCTGCTGCAGCGGGAGCTGACCCAGGGGGACAGCCTCAACAAGCTCGCTCTTCAGTATGGCTGCAAAGTAAGAAACCCCACAAGAGAAGGCGCCACCTGCCCCTTGGCCCTGTGTTAAGAGGAACAGAGGCACTCACTGAAGGGTGGGGACCCTTCCTACCTCTTCTGGACCCCCAGAAGTGGTTGGGAGAAGCCTGTTTGAGAGTAAAGGACACTCCTATCTAGCTAGAGATGGAGGGCAGGTGGAATGACCTGTTTATCACAGAGAAAGGGAATTAGGAATTTCAGGTGATGGGACAGTTCCCTCTCTGCACAGTACTTCTGGTCTTCCTTGTCCTTCCAAACTGAAATTCTGAG TCONS_00120438 r 3' 1817 TCONS_00120438 r 3' 3806 EMBV3_33418 TGTCCGCAGCATCAGCAGCAGAAACAGCAGCTGCGGGCGACCGAGCGGAAAAAGGAGACT Gene GeneID:100138824|LOC100138824:XM_002699550:59_cdna Constitutive 0 NULL GeneID:100138824 X GENE LOC100138824 NULL hypothetical protein LOC100138824 EMBV3_43291 AGCCGAATTGGATTTGATGGCATGCAGTGGGAAGGCTGGTTTTGGATAGCTGAAAATATG Variant GeneID:536891|FKTN:XM_002689900:36_cdna 166^372 1 EMBV3_16000 GeneID:536891 8 GENE FKTN NULL fukutin EMBV3_39808 GAACTAGCTTGCACATTTTAGGTCTGTGAAATTTTGTGAGACTTTTCCTGCACTGGACAG Gene GeneID:507204|NLK:XM_002695742:431_cdna Constitutive 2 NULL GeneID:507204 19 GENE NLK NULL nemo-like kinase EMBV3_17429 TGGTGGGCTTCCGTCTATGGGGTCGCACAGAGTCAGATGCGACTTAGTAGCAGTAGCAGC Gene BVT0102_116970 + 0 NULL GK000018.2:23910268-23962443 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082588 TCONS_00082593 TCONS_00082591 TCONS_00082589 TCONS_00082596 TCONS_00082592 1 XLOC_051053 Coding TCONS_00082592 XLOC_051053 Coding Coding LPCAT2 18:23861777-23930561 j TSS62269 5246 1 TCONS_00082592_2 474 0.199008768585589 10 0.923876539261155 9.72840178199268e-05 5.40732459186725e-05 0.000153596219804864 9.47947708132165e-05 0.000102965773753456 7.63678196289644e-06 0.000157911950525989 3.1875150103321e-07 0.000162458052256202 0.000516780604231761 5.85273955536015e-06 9.24686310328843e-06 3.85410618377742e-10 3.89563283844522e-16 1.65264951168793e-05 0.0016413285940666 0.000273825009745184 3.67067698584029e-08 1.06163888672697e-06 0.000277487370866637 9.21803287913341e-09 0.000777137256469725 5.93882594801067e-06 0.000961491331694658 0.000249528813287842 0.000174569238773458 0.000252499841740344 0.000102003215490383 7.6647835027551e-05 8.4975071949438e-05 NM_001205797.1 LPCAT2 Bos taurus lysophosphatidylcholine acyltransferase 2 (LPCAT2), 0.0 1943 100.00 0.205108654212733 NM_017839.4 LPCAT2 Homo sapiens lysophosphatidylcholine acyltransferase 2 (LPCAT2), 0.0 1373 82.87 0.252001524971407 TCONS_00082592_2 sp|Q7L5N7|PCAT2_HUMAN PCAT2_HUMAN Lysophosphatidylcholine acyltransferase 2; 7e-175 507 92.72 0.548523206751055 5 coding 0 0 0 0 0.538278839053553 0.0964440123727968 0.0796819263411852 0.232762169638305 GCGCCTGCGCAGAAGCCCCGGACTCCTAAGCGGCTCCCACTGAGTCTTGGCGGCGGTGCCCACTGGCGCGCTCCGCGTGAGTCGCTTCGCTCTAGTCAGACGCCAGGGTCGGCCATGAACCGGTGCGCTGACGCGCGGGCCGTGGCGGCCACTGTGCCGGGAGCTGACGTCGGGAATGCGGGGCTGCGGCCGCCCATGGTGCCCCGCCAGGCGTCCTTCTTCCCACCACCTGTGCTCAATCCCTTCGTGCAGCAGACGCGGCTGGGCGTGGCGAGGCGCATCCAGATTTTCTTCCTTGGAATTATCCTGCTTCCAATTCGTGCCCTATTGGTTGCAATAATTTTATTACTGTCGTGGTCACTGGCTGCAATTTCAACAGCATGCTGTCCTGAAAAGCTGACCCACCCAATAACTGGTTGGAAGAGGAAAATTACTCATCCAGTCTTGAAGTTTCTAGGCCATGCCATGTTCTTCTCAATGGGGTTTGTAGTTACTGTGAAAGGAAAGATTGCAACTCCGTTGGAAGCACCAATTTTTGTCGTTGCCCCTCACTCAACATTCTTTGATGGAATTGCCTGTGTTGCAGCTGGATTACCTTCTATAGTGTCTCGAAATGAAAATGTGCAGGTGCCTCTGGTTGGCAGAATATTGCGGGCCTTGCAGCCAGTGTTGGTGTCCCGTGTAGATCCAGATTCTCGAAAAAACACAATAAATGAAATAATAAGGCGGGCCACATCAGGAGGGGAATGGCCCCAGTTTATGCCTGTTCAAGTACCAAGTGATGAAGAAAGATGTGATCCTGTCCTTTTTGCCAGTACAATCCGGAATGTAATGGCAGAAGCTCTGAAAATTCCAGTAACAGATCACACCTACGAAGACTGCAGATTGATGATTTCAGCTGGCCAGTTGACACTGCCTATGGAAGCTGGGTTGGTGGAATTTACCAAAATCAGCCGGAAATTGAAATTGGATTGGGATGGAATTCGAAAGCATTTGGATGAGTATGCCGCTATTGCAAGTTCCTCAAAAGGAGGAAGAATTGGAATTGAAGAATTTGCAGAGTATTTGAAGTTGCCTGTTTCAGATGTCTTGAGACAACTTTTTGCACTCTTTGACAGGAACCACGATGGCAGTATCGACTTCCGAGAGTATGTAATTGGCCTGGCTGTCTTGTGCAACCCCGCCAACACAGAGGAGATCATCCAGGTGGCATTTAAGCTCTTTGATGTTGATGAGGATGGCTTCATAACAGAGGAAGAGTTCTCCACCATCCTGCAGGCTTCCCTTGGAGTGCCTGACCTTGATGTTTCTGGTCTCTTCAAGGAAATAGCCCAGGGGGATTCTGTCTCCTATGAGGAATTTAAAAGTTTTGCCCTAAAGCATCCAGAATACGCTAAGATATTTACAACCTACTTAGATCTCCAGACGTGCCATGTGTTTTCATTGCCAAAAGAAGTCCAAGCAACTCCCTCAGTTGTAAGTAATAAAGTCAGCCCTGAAAGTCATGAAGAAAGTACCTCAGATAAAAAGGACGACTGAAAACAAATATTCCTAATAAGGAAACCACGGTGGCTTTTATTTGAAATTTCAAAGGCATGTATTGGTAGTATTTTACTTGTGATTGAGTAAGGATGATGTTTAAAATAGATAGCTTTTTTATAAAAATGATAGATTTTTCTTTATTGAAAGGCTTCTATTCACATGTATTTATCAATATTCCTTTTCTTTTATATAATATTTTGCTATACTGATTGGCTTACTGGTGAGAAAGGTATTTTTATGGATTTTCCAGGTTAGTTTGCATATCCAAATAAATGAAATGACCTCCCTTGTTTACTGAGGAGCATTAATCAACACTGTAAAAAAAATTTTAAGTATAAACACTTTTTCATCTACCTTCCTCTAAAGAAATAAGGTTGTATTCTGTTAACTCTAGTTTCTTCCCATTCTGGAAATAAGAATGAAGAGCCTGAGGAATGTTGCATAATTTTATACCTTTAATTTCACAGATTCATCTCTTCCATTTGTATTTCAGTTTCTTGGATCACTGAATGTGGGGGGATTGGAAGGGAGAGCTCTGTTAATTGGATCAGTTCAGTTCAGTCGCTCAGTTGTGTCTGACTCTTTGCAACCCCATGAACCGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTCCACCCAAACCCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCTCTCAGTCTTTCCCAGAATCAGGGTCTTTTCCAATGAGTCAGCTCTTCGCATCAGGTGGCCAAAGTATTAGAGTTTCAACTTCAACATCAGTCCTTCCAATGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCTGCACTCAGCTTTCTTCATAGTCCAACTCTCACATCCATACATGACCACTGGAAAAGCCTTGACTAGATGGACCTTTGTTGGCAAAGACTCCTTAAAAACTCATATTCTCTTGAGCATGCATCCCTATTGTTGATTTCCTTAACCATCTGCTAAGGAAATCATACCTTTTTTTGAGATCTACAGATTTAGAACTTTGTTTTAAAGACAACAACTGTGGCCAAAGGCTATGTAGGAATTGCCTTATTGAAGGTAACATTAATTGTATAATGAGAAAATAAATTGTTTGCCACAGAATTTAGTTTCATTTTAGTTGGGTAGTTTAGAATGTAGTGCTTGCCCAGTAAATGAATCAGATTTACTTTATTTTAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGGCACGACTGAAGCGACTTAGCAGCAGAATTAATATATTTTACCATCTAAGTGGGAATTTTATTAAGTGTCCTCTCAAATTTGAGAAAATGAAAGTGAAAAGTGTTAGTCACTCAGTTGTGTCCAACCCTTGCGACCTCATGGACTGTAGCCCACTAGGCTCCTCTGTCCGTGGAATTCTCCAGGCAAGAATGAATACTGGAGTGGGTTGTCATTGCCTTCTCCAGGCGATATTCCTGACCCAAGGATCAAACCTGGGTCTCCTGCATTGCACACAAATTATTTAACATCTGAGAGCTTGCCTGAAATATCAACAGGAAAAATAGGAAGGTTCCAAACTATCACCAAAAGCTAGGGAATCCAAAAACCTATTTTATTAATGCAAGACCACTATTTAGTCCCCAGGCAGGAATTTAGCATTTTTTTTCCTTTAGTTTAAGCAATAATTTCCCTCAAATGCCATTTTATTAGATGTCATGCATGCTTACTAAAAAGTTTCATCCTTAAGTATATATGTATGATTGTTCGCTTTTTACATATCTTAAGCTATTTAGGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGGAAATCCCATGGATGGAGGAGCCTGGTAGGCTACAGTCCATGGGGTCACTAAGAGTCGGACACGACTGAGTGACTTCACTTTCATTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCGACTCCAGTGTTCTTGCCTGGAGAATCCCAGGAACAGAGGAGCCTGGTGGGCTTCCGTCTATGGGGTCGCACAGAGTCAGATGCGACTTAGTAGTAGTAGCAGCAGCAAGCTATTTAGACAAAGAATGGAATGAGCTGAAAGCAATTGCTTAAGTAATTAGGAAAGTACATCTTTATAATATTGTTTATCACATGGAATTGAATATATATAATACTCAGGTACCCTGATTTTTATCATGGAAAAGTCACTTGTTAATCCCATTAATCATGAAAAAGTAGCATTTTAAATTACAAGCTTTCTATGAGGCTCTTGAAAGTGATCCCATTGTTTTACTGTTTTAGAGTAATATTTATGTTCTTTAATTCCACTTCTGCCAATGTACTATTTCTCTTTTATTATGTTACTGAACAAACTTACTACATAAAATTCTTGGCAATTAAAAATTCTGGTTTTGCCATTTTTGTCTCAAACGTAATATACTTTTTTAATATGGTTTGAATGTAAGTTTGTATATTTGTGAATGTGATCAATTTTGTTTGCATTTAAGCCTTATTAAATATCACACATAATTTTACTCTAATAAATGACTCAAATTTTAGCCAAAGCAGCAATAGTATTCCTAAAGTTGACTTTTGACTGATGGAGTGTATGTAATAACACAAGTTATTACTGTTAGTATTACTACCAACTAGGCCTCTGCTTTTATGTCATCTAAACAAAGATTTTCTTCAAAGCGGCTCTTCTCTTAGAATTTAAAGTTAAGCAATTAAATTTCATTAAATCAGTTAAATGCACTGTGCTTTTATATAATAGTTTGAAAGACCCAAGTTACTCTTTGAAATGAGAAATACTAGATCCTAAGACTTATACACCATAAAACTTTCGATCAGAACAGTTCTGTTGAAGGATAACGACACACTGAATGTTTACAGAGCAAGTTGCTTGCTTTATGTATATTTAATTATCTTCTGCCACTGTTTTTAGAGTCTTGCAAGGCTGAATAGGATCGCTAGCAGTGCTACCTCTAATGGAGACTTAAAAGAGCCCCTTTTAGAAGACGTATGGTGTGCTATCTGTATGAAGCACGGCAGTATGGATATCTGATTCTCAGACTCAGGAACTCTCCCTATCAGACTGTTACAAATGCAAGGTGGTTAGTTGGTAGCAGTTAATTGATATACCACTGACTCTATTAGAATACATGGGCTCCTCACCACAAAGGTCCTTATGGAATCCTTATAAGGGTATCACTACAGAGGATAAAAAGATACTAGTAAGAAGCCCTTTCCTAGGAATGCAGATGTATTTATAATTCTTATTTTCTTTTCTGTTCACTTGGATTGACTTTGCCATTTTTTTGCTCAGTTGTTAGACCAGAGTATTCTGTCAATGCCATGCTGTGAGTTGATAGAGGGGAAAGGCCGTCATGAAGTTCTTAACATATATCCAACATACATGTCTTGTATACATATCATTAACAATGTATATGCTATTTATATCCTACTATTCCACTTGCAATGTAACATTTTCCAGTATCCTTAAACTCTGGAAATGTAAATTTTAAAATGTATGCCTAAGTTCCCTTCAGATAACTGTAACATAATCATGTGATCATACTT EMBV3_19747 GCTGAAGAATTTTGCAAGCCCCCTGGCTTCAGATGGGGACAAAAAGCTGGCTGTACTATG Gene GeneID:522215|AFF2:XM_002699630:2_cdna Constitutive 0 NULL GeneID:522215 X GENE AFF2 NULL AF4/FMR2 family, member 2 EMBV3_26726 ATCTGGTCAAGGCCAGAAAGCACCCAGGTGCAGAATATCTTACGCCAGAGAACCGAAAAC Gene GeneID:780882|GGPS1:NM_001079801:117_cdna Constitutive 0 NULL GeneID:780882 28 GENE GGPS1 MGC143043 geranylgeranyl diphosphate synthase 1 EMBV3_29652 AGCTCCCCTCTTGTCAGAAACTAGAACTGGAGGAAATGGATGTAGAAGCTCGACTTACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39419 TGCCCTTCTCCCTCGGAGGAGTCCTGAGAGACACTGGACTTAGGGTTCCCATCATGAAGA Gene GeneID:100294774|LOC100294774:XM_002685987:323_cdna Constitutive 0 NULL GeneID:100294774 3 GENE LOC100294774 NULL similar to lens epithelial protein EMBV3_12266 GCTGGGGGCCCGCACGGACCCTGTGCCTGACACAACAGATTTGTCCTGGACTGCAAAGAC Variant GeneID:282514|PAFAH1B2:NM_174664:32_cdna 395^482 1 EMBV3_38157 GeneID:282514 15 GENE PAFAH1B2 NULL platelet-activating factor acetylhydrolase, isoform Ib, subunit 2 (30kDa) EMBV3_08635 TTTGTGATGGAATATGTTAATGGGGGAGAGTTGGAGAATTTGATGCTGGATAAAGATGGC Variant GeneID:100137872|AKT3:XM_002693954:132_cdna 738^860 1 EMBV3_20905 GeneID:100137872 16 GENE AKT3 NULL v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) EMBV3_39518 GCTACTTCCGCTTCCAGAGGAAGCCAGTGGACGGGGCTCCGTTTAATCAACGAGCGTTTA Gene GeneID:789454|TECPR1:XM_002698146:574_cdna Constitutive 0 NULL GeneID:789454 25 GENE TECPR1 NULL tectonin beta-propeller repeat containing 1 EMBV3_06716 AAAGTACACAATGCTGGAAATAAAGCTGAGGAACTCGGAGCGGGCACGGGAAGATGCAGA Gene GeneID:509022|ARHGAP22:XM_002698985:164_cdna Constitutive 0 NULL GeneID:509022 28 GENE ARHGAP22 NULL Rho GTPase activating protein 22 EMBV3_27718 GTCACTGAGCAACAGTTAGTGGCCAATTCAGCAAACGGTCGTCAGAATGGTGGTTGTCAG Gene BVT0102_089315 + 0 NULL GK000004.2:72862038-73326979 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182025 TCONS_00182026 1 XLOC_110750 NonCoding TCONS_00182026 XLOC_110750 NonCoding NonCoding - 4:72916021-73045629 - TSS136111 238 0.794117647058823 2 0.998179110696181 0.00386684011033602 7.45680524977707e-05 0.00112255350755721 0.00051998395416359 0.000783286219722702 0.000381163002743634 0.000836059554778504 0 4.54961484876685e-12 0.000118385092576486 0 0 2.7987678416578e-45 0.00118023172185359 0.000269156353474735 0 0 0 0.00146261128973329 0.000103645753235594 0.000144989830220186 0 0 0 0.00250388358827137 0.00168735846819112 0.00157088790833845 0 0 0 XM_005213890.1 GPC5 PREDICTED: Bos taurus glypican 5 (GPC5), transcript variant X2, 1e-17 93.3 80.58 0.420168067226891 0 noncoding 0 0 0 0 -0.235821869848856 0.143565619160823 -0.00682735949011282 0.904439884537583 GTTGTGCTCAGCCATTGGTTGGCTCTGCTGTGGGCTCTTCCCCCAAGTGAGCAACTGTCACTGAGCAACAGTTAGTGGCCAATTCAGCAAACGGTCGTCAGAATGGTGGTTGTCAGGTGGAGAATGAGGTAAAAAGTGGATCCTGGCCTTCTCCCTGGTGCCCTCCATCTCACCCGGCCTCGGCCAGCGGCTGACTAATCGCCAGCCTGTGCCTTCTTCCCTTCATGGTACAATTTAA TCONS_00184551 r 5' 53985 TCONS_00184551 r 5' 53985 EMBV3_30579 CCATGGCCCCGTCCCCTGTTGTTGGTGATTTGTTTGTCTTTCTGATAGGTTGAAAATTGT Gene BVV0102_066062 + 1 EMBV3_22010 GK000029.2:40590844-40600099 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20653 ACCAAAGACTTCGTGGGTCCAAGTGAGAGAGGAGGCAGAGCTCGAGGGACCTTTCAGTTT Gene GeneID:505228|THRAP3:XM_002686473:527_cdna UTR3_Alt 3 NULL GeneID:505228 3 GENE THRAP3 NULL thyroid hormone receptor associated protein 3 EMBV3_40291 CCGTTTTAACCGTCTAAGCACCCCAACACATACCTGATGAGCCTGAGATACTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_27306 ATACTGTAGCTTTTTATCCCCTCGGGGGCACCTGTGAAGAAGACGTGTTGATGTGGACTC Gene BVT0102_104427 + 0 NULL GK000015.2:79062225-79083119 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30901 CTCTCGGTGACAAAGGGTTGGGAAAACGCCTGGAGTTTGGGAAGCCGTCGTCGAATGTTT Gene GeneID:508088|NDE1:NM_001100321:332_cdna UTR3_Alt 2 NULL GeneID:508088 25 GENE NDE1 NULL nudE nuclear distribution gene E homolog 1 (A. nidulans) EMBV3_28856 ATGAACTGGTAGAGCTTCACAGAAGGCTGATGACGTTGAGGGAAAGACACATTCTGCAGC Gene GeneID:521962|MLLT3:XM_002689544:13_cdna UTR3_Alt 2 NULL GeneID:521962 8 GENE MLLT3 NULL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 EMBV3_17286 TTTCATCCAAGTCTGAAAGTAGAGGGGTGACTGGGTGCAGGTGGGGTCCAAATGAGAGCT Gene BVT0102_128247 - 1 EMBV3_12813 GK000002.2:127202532-127247554 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112431 1 XLOC_068326 NonCoding TCONS_00112431 XLOC_068326 NonCoding NonCoding - 2:127241252-127241818 - TSS84052 566 1 TCONS_00112431_1 37 0.53356890459364 1 0 0 0 0.000196197859182992 0 0.000418701325313761 1.26397439284069e-05 0 0 0.000153341793194597 1.45388793780849e-05 0 6.31746283608118e-06 0 8.31094612432893e-06 0 0 0 0 0 0.00143574620183816 1.60904357174512e-05 1.31107326086914e-05 0 0 2.44821887050053e-05 3.734338147586e-05 0 0 8.57704314585516e-06 0 0 noncoding 0 0 0 0 -0.0240518954550638 0.83558699389223 0.00730581694099111 0.912142987900022 GGCGTTCACTAGCACAGCTCCCTCACCATTCATCTCCCGTCCCCCATGTTTCTAGGGAGCGAATGTCTCCACAGTTCTGGACCAAATCAACCAGCCGCTGGGCTGCCTTTTAGGAAGTCAGATCTCGTGGCCCAAGAGTGGTCTTTCATCCAAGTCTGAAAGTAGAGGGGTGACTGGGTGCAGGTGGGGTCCAAATGAGAGCTGCAGAGGCTGCTGAGGAGTCTGAGGGATCTCATAGAGTCTGTGTCCTCTGTAGTTAGGACACTGCAAACTGGTTGGGTCCAAAACAGATTTTTCAAATTGGACCAAAAGAATTTATTGATGGACTGATCGTGAATGGAGTGATGGACGGGCAAAGAGAGAAATCAAGGTTTTGGTGGATGATGGTCCTGTTTACTTAGATGGGGAAAGCTTGAGGGAAAGATTCTTTGTTATAAAAATTAATAAATTTTTGTTAGATTGGTGAAGTCTATTAAGTGCCCTAAGTCTGGATTTGAGGGGAGAAGTTCTGCTTGGAGATAGAAATTTGAGTCACTGTCATGTAGACGGTGGGCTTCCCAGGTGAC TCONS_00106680 TCONS_00106681 TCONS_00106682 TCONS_00106683 TCONS_00106684 . 3' 9947 TCONS_00106680 TCONS_00106681 TCONS_00106682 TCONS_00106683 TCONS_00106684 . 3' 10512 EMBV3_30591 TTCTGTTAGTCCGCAAAGATCTGCGCGATGCTTTAACACTAAGACTTCTTTCTGGGTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18888 TTGAGTTGCTGTCTTTGCATTTCAAAGAGCATCTCCCTTCTCTAGTTTTACTAACTGCCC Gene BVT0102_323121 + 0 NULL GK000015.2:35945988-36069938 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04491 TGTCTTTTAAACTACCCACATACAATGGAGCGAATCCAACCTCTGTACAAAGTGGAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10562 AAACCCAAGGCTGTGCTCATCACCTATGGGGACACCTCCCTTCTCAAGGACCTGGGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11152 CACAGGCTGGTGTGACCTGAGAGGATTGTCCTGTGAAGCTCTTGGTTTAAGAATACGGGT Gene BVT0102_151757 + 0 NULL GK000005.2:24322864-24466578 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22688 CTGGCCAACACCGGAGAGAAGACAAGCCCAGAGCTCAGAAATAAAGTTACCCTCCAGGAA Gene GeneID:100295531|LOC100295531:XM_002695869:360_cdna Constitutive 0 NULL GeneID:100295531 19 GENE LOC100295531 NULL hypothetical protein LOC100295531 EMBV3_16402 GGCTTTGGGGAAAGGCATGTAAACAAACTGCTCCGAACCTTTACTAACCAGAACACCCAG Gene GeneID:282245|GUCY2D:NM_174548:433_cdna Constitutive 0 NULL GeneID:282245 19 GENE GUCY2D NULL guanylate cyclase 2D, membrane (retina-specific) EMBV3_39227 GGCTGTTTTTAATTGTTCAGCTTTCCCCAGGATGAGCAAGGAGTCAGCTCTGAAGGCCAG Gene BVT0102_360316 - 0 NULL GK000019.2:39051472-39056966 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096745 1 XLOC_058046 Coding TCONS_00096745 XLOC_058046 Coding Coding NFE2L1 19:39053046-39070814 j TSS71818 6585 1 TCONS_00096745_5 790 0.0529992406985573 7 0.629763043845331 0.000198417281928469 0.000592427908115902 0.000457028744347838 6.29566016441257e-05 0.000390635887686882 3.10912442463437e-05 0.000120395811366225 0.000593502787373275 2.0278122793085e-05 5.61500839582058e-06 1.37980716910996e-283 1.15175862853472e-06 9.19629030898056e-05 6.1274247916643e-06 1.57096247365199e-197 8.25050024212815e-05 6.7964921033605e-05 0.00011786635251087 9.85129082533432e-05 0.000837891461356317 0.000235237500872684 7.16508585845955e-05 5.49293903116816e-06 8.90194693567401e-05 0.00019594437860412 0.0002242292696847 0.000395575134472297 5.00367689856621e-06 5.59007280000198e-05 5.00807060165872e-05 XM_005220591.1 NFE2L1 PREDICTED: Bos taurus nuclear factor (erythroid-derived 2)-like 1 (NFE2L1), transcript variant X2, mRNA. 0.0 5359 100.00 0.451025056947608 NM_003204.2 NFE2L1 Homo sapiens nuclear factor, erythroid 2-like 1 (NFE2L1), mRNA. 0.0 4273 91.77 0.452239939255885 TCONS_00096745_5 sp|A5D7E9|NF2L1_BOVIN NF2L1_BOVIN Nuclear factor erythroid 2-related factor 1; 0.0 1442 98.58 0.978481012658228 1 coding 0 0 0 0 -1.03012127362278 0.0216235323811647 0.000862991775152214 0.98585383216628 GGTGGAAGGAGGGGGCGGGGAGGGAAGCGGAGGCTGGCGAGATCTAGGCCGGCCGGCGGTGGCGGCTGCAAGGCCTGGACTCGGGCTGAGAGCTTGCTGTGGTGGCAGCGGCGGACGCCGAGCTCAGCAGCGGGTTTCTCTGGAAACCCCCCTGGTAAGCGTGGAGGAGGCGGGACACTCTGACCCAAGACAAAAGGCCTGTAGCTCCAGCCAAAGAAAATAAACCTTAGGAAGGAGAAGGAGGGAAAAAAAAAAAAAAATCATCAGCTGTTTGTGAGAACAGCCTGCGGTGGAATCTGCAGAATCTACAGAGAGGACAACTAATGTGAGTGAGGAAGTGACTGTATGTGGACTGTGGAGACAGTAAGTCACGTGGGCCTCGAGGACCTGGACTGGGTTAGCAACAGTTGTACTTTCAGAGGTGAGGTGTCAAGAAGGGAAAAGTGAATGTGGTCTGGAGTGTGGCCTTGGTTCCAAGGGGCGTGTTTTCCTCTGAGGCCATCAGGGAGCTCAGCCCCTGTGTTCTGCCAGGGTGGGGTACAGGGTTTGGCACTGAGGAGGGTGACTTGCTGGCTGGAGCAGCAGAGCAGTGGCCTTGATCTGTCTTTCAGAAGATTTAAAAACCAAAAAACATAAACATTCTGGTCCTTCAGCAATGCTTTCTCTGAAGAAATACTTAACGGAAGGACTCCTCCAGTTCACCATTCTGCTCAGTTTGATTGGGGTGCGGGTGGACGTGGATACTTACCTGACCTCACAGCTACCCCCGCTTCGGGAGATCATCCTGGGGCCCAGTTCTGCCTATACTCAGACCCAGTTCCACAACCTGAGGAATACCTTGGATGGCTATGGTATCCACCCCAAGAGCATAGACCTGGACAATTACTTCACTGCCCGGCGACTCCTCAATCAGGTGAGGGCCCTGGACAGGTTCCAGGTGCCAACTACTGAGGTTAACGCCTGGCTGGTCCACCGGGATCCAGAGGGGTCTGTCTCTGGCAGCCAGCCCAGCTCAGGCCTCGCCCTCGAGAGTTCCAGTGGTCTCCAGGATGTGACAGGCCCAGACAACGGGGTGCGAGAAAGTGAGACGGAGCAGGGATTCAGTGAAGATCTGGAGGATTTGGGAGCTGTAGCCCCTCCAGTCAGTGGAGACTTAACCAAAGAGGACATAGATCTGATTGACATCCTTTGGCGACAGGATATTGACCTGGGGGCTGGGCGTGAGATTTTTGACTACAGTCATCGCCAGAAGGAGCAGGATGTGGATAAGGAACTGCGAGATGGGGCCGAGCAGGAGGACACGTGGCCAGGCGAGGGTGCAGAAGCTCTGGCACGAAACCTGCTAGTGGATGGAGAGACTGGGGAGAGCTTCCCTGCGCAGGTGCCTGGTGGGGAGGACCAGACAGCCCTGTCCTTGGAAGAGTGCCTTAGGCTGCTGGAGGCCACCTGCCCCTTTGGGGAGAATGCTGAGTTTCCGGCAGACATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGTGAGCCCCCAGGTCTTCAGAACAACCTTTTGTCTCCTCTGCTGACTGGGACAGAGTCGCCATTTGATTTGGAACAGCAGTGGCAAGATCTCATGTCCATCATGGAAATGCAGGCCATGGAAGTGAACACATCGACAAGTGAAGTCCTGTATAACGCCCCTCCAGGAGACCCACTGAGCACCAACTACAGCCTTGCCCCCAACACTCCCATCAATCAGAATGTCAGCCTGCATCAGGCATCCCTGGGGGGCTGCAGCCAGGACTTCTCACTCTTCAGCCCGGAGGTGGAGAGCCTGCCTGTGGCCAGCAGTTCCACGCTGCTTCCGCTGGTCCCCAGCAATTCCACCAGCCTCAACTCCACCTTTGGTTCCACCAACCTGGCGGGGCTCTTCTTTCCGCCACAGCTCAATGGCACAGCCAACGACACAGCCGGCCCTGAGCTGCCTGATCCGCTGGGGGGTCTGTTAGATGAAGCCATGCTGGATGAAATCAGCTTGATGGATCTGGCCATAGAAGAAGGCTTTAACCCAGTGCAGGCCTCCCAGCTCGAAGAGGAATTTGATTCTGACTCAGGCCTCTCCTTGGACTCCAGCCATAGCCCTTCCTCCCTGAGCAGCTCTGAAGGTAGCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTGCTTCTTCCTCAGCCTCTTCCTCCTTTTCTGAGGAAGGTGCCGTTGGCTATAGCTCTGACTCTGAGACCTTGGATCTGGAAGAGGCTGAGGGCGCTGTGGGCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGAGCTACCAGGACCCGTCTCAGCTCTCCTGCCTGCCCTACTTGGAGCACGTTGGGCACAACCACACGTACAACATGGCGCCTAGTGCCCTCGACTCCGCCGACCTGCCACCCCCCAGCACTCTCAAGAAGGGCAGCAAGGAGAAGCAGGCCGACTTCCTGGACAAGCAGATGAGCCGGGACGAGCATCGAGCCCGCGCCATGAAGATCCCGTTTACCAACGACAAGATCATCAACCTGCCTGTGGAGGAGTTCAACGAGCTGCTGTCCAAGTACCAGCTGAGTGAGGCCCAGCTGAGCCTCATCCGTGACATCCGGCGCCGCGGCAAGAACAAGATGGCGGCGCAGAACTGCCGCAAGCGCAAGCTGGACACCATCTTGAACCTGGAGCGGGACGTGGAGGACCTGCAGCGCGATAAAGCTCGGCTGCTGCGTGAGAAGGTGGAGTTCCTCCGGTCCCTGCGGCAGATGAAGCAGAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCGGCTGCGGGATGAGAACGGGCGGCCCTACTCGCCCAGTCAGTACGCGCTCCAGTATGCCGGGGACGGCAGCGTCCTCCTCATTCCCCGCACCTTGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCGAAGGACCGGAGAAAGTGGAGTGGGTGTTCCAGCTTCAAGGCTTTTTCTGGCAGGAAGAAGATATGAGAACTCAAGCAAGGCCTGTGAAAGCTGTTGCACCTGAGACAGGAAGTGACGCAAGGTCCTGGAGTTCATAGGGGGATGAGTGGGCCTCGGGACCAAACTTCTGGGTGTCTTTTTGGGGAGGGGTCAAAAGCTTGCTTTGTCTTGACTTTAGTTCTAGGTGTTCTTCAAACTGATTTTCCCACACATCTTCAATTATGTAAGGCAGTGGAAGTAGATCCTCCCCCCCCCCCCCCCAGGCTCTGTGGGGTCTTAGTTCCTCAATAGGTGATCCAACGCTTACCCCCTGCACGGAGTCTTAATTGCTAGACCACCAGGAAAGTCCCAGATCCATTGTTTCAGTCTCTGCCCCACATAAGGTCTCACTACTGAAACCAGGGCTATTTTAGTATCAAAACAGATCTTCAGTAAAAATAGAAAAAACCCCCACAGAACCGAGGGGAAAAATAGAAATCTAGAGACATGCTCCAGTGTCAAGATCTGGCCTTCAGAGCTGACTCCTTGCTCATCCTGGGGAAAGCTGAACAATTAAAAACAGCCGCTGAGTGAGGAGGTACTTAGCATGGAGTCCTATCTTAGGCTGCCTTCATCCCTGCTTTTACCACCCACAGCTACAGCAGACCTGCTCTTCAGGTCTGTTTGGCAAGTAGCTGGAAAAACAAGTGCCTTGTAGAAAAGTGTCTCCACCACCCTATTTTAACTCATCCAGTAGGGACTGACCTAGAGCAACAGCTTCAGAAGCTCAGGCTGAATATATAGTTCTAGGGCACTGATGCTATGCAGGTACTCAAAGGGGTACCAGGTTGGGATCTGCCTTCCTGGAAGTCATTTTCATAACCCAGTGTAGACATGCTCTAGCAAAATCCGTGTGTTTGATTACTGATTATGATGAGTGGTTAAGCCTTTTTTTCCTATCCCTGATCTATCTGGGAAGTGAAAGGGACTCAGACCTTCACCTTGTCATTTTGTCAGTGTACCAACACCCCTCTTTCACTTCCACTTCTCACACAGAGGTGTCATTCTTCTTTCCACTAGTTCTGAACCTTACAGTAGAGAATGAGCATGTGGGGATACATGTGAAACTTAAACGTATGGTTTGAGTTCCAGTCCTTGTTAGATCTAGGACTTCTTTGAAAGTTCATGTCTGCCTGAATTAGTTGAAAAACATAAATCTAGTGTACAAGTTGTCGCCAGTGGAGTGAGAATATGGGCCCTTGCTGAAGAGGTGTATTTTCACAATCAGTAGGATAGAAACCCTTGTCTTCCTTTTTGAATGTGCAGACATATTAAGTCTTAAAGCGGGCTCTTTTCCAATCTAACTATATAATGGAGTAGGCTGCATGGTATTTGTTACTAATTCCAGTTGCTGTTTTAACCAAGGAAATAAAATCTAGTTCATCTGAAGAGAGGCAGAAAAGACCCAAGTGTTTGGGCTCTGCCTTTTAAACGAATTTAATGAGGCTAATTCAGTTGTCTTAACAAGCCTTCCAATCTTCAGCTAGGGGCTGAAGCAGTAACTGCAACTATAGGCTCATGTCCCAGAGCCAGGCCCCAAAGTAGCCCAGCCTGATCTGCGGCTATGCAAAACAGTAAACAGCAGGATTGGTCAGTCAACTAGGATTTTAAAATCCTCGTGGCATGAACAGCAGCTTTGGTACGATCACAAACTATGCAAACCAACAAGGTCAGGATGCAGACTCAGACCAGTTGGTGAATTAACACTAGCTATTTATTAAAAACTAGTCAGCATATATTGTAAACTTAAATGTTTTAGCCTTGCCTCAGAGTTCTGCCACCTAACTGGCCTAAGCCAAAAAAAAAAAGAAAAGCCTTAGAAACATTCCTTGCTCTACTTTCTTCAAGCAGGGCCAACTATGCTTTTTATCCCGGTAGGATGGTTTTTTCTTTTTTTTTCAGATTTCATTTGCTTTCAATACCCATCAGTTTACTCAAAAGGAGGTGCCCAAGGCCAAGTTGATTAAAAGTCATACAGATGAGAAAACGACTCTGAACTCTCTGGCTAGGGAATCACTAACTTGTAGAGAAAACCTTGCTGCACAGTCATACCAAGGTGATGTGCAGATCAGAGACTGATGGTTGTCTAAGGATCTTAAGCTCCTATATCAAACTTCTTACCACACACCAGACATCAGGATGCTAAAAGAAAAGGAGAAGGAAGCCAAGACTTCCTTTTACTTAGTAAGCTGAATGCCGGCCTGGTAGTGGTATTTGTATTTCAATCAAATTCTAGTGGCGGGAAAACACTGAGCCTAGACTTAGTTCATTCCTATCAGTTCTGAGTTTTAAATGAGAACATCTTTATGAGAAGGCTAACTTGCATGCACATCAGATTAATATGACTTGATCAGATAAATATGACTTGATCAGATAGATTTGATCTCAAACAGCCCAGCTCCATGCATAGTTCAGGATTTGGAGCCATTGCAGAAATTTGGATTTCAGAGTTCCACCAAATTTTGACGCAGCAGTTTCTTCTAGCATTCCCCCTTTCTCTATGAGGAAAATAACTATACCTTGTAATACAGATTCCCAGTGTCACAGACCGTAGACTGTAAATGTGTTGTGTACATATGGTCAATGCTAACTAGCCAAGGGTTAAAATCAGTTGAACTCCAGTCTGAATGAGTTCTGGAATATAAGATTACATCTGAAAATAAGTACTTAAAAACTCAACTATTAAAAATTACTTATAATTGGTAGTCAAAACTTTCAAATGCCATTGGAAAGCAGAAAGTTACTCCTGAGCATGAGTGTTTTTGTATTTATTAACTTGAAACTAAAGGCAGTAAAGGAGCAAGGTATTTTTTCTTGACTGGCTTTGCCAGTGTCAGACAATGATTCTGTCATCAAATCAGTTAGCTGTTGTTCTTCTGTAATGGTAACTAGGGCAACAACTTAATATACCTCCTTGACTCTTGGGCTAGAGGTCTGTGATGATGTAGGTTTGTCAAAGGCGTCCAACATATGTTTTTGCACATCTGAAGACATGCTCTACGAATACTTTCTGAAAGGAGACTTAAGATTTGTTGTGTCTATGTGTATTTTTTCCCTAACACTTTTGCATGCATTTGTGGCTTCAACAATCACTTGAGAAGAATTTATCCTTCATTCTTGAGTCTAGAAATGTGTGATAATTGGCTTTTAAAGATAACCAAATTGTGTCCCTTCGCTTCAGTTTTCATTGCATGCATTATCAATTCCAGTGTCTTCCCTGGGAAAGAATATGGTTTAAAAAAAAAACAAAAAACTTATTTTTGTCTATGCTGAGTCTTGGTTGCTGTGCCCCGGCTTTCTGTAGTTGCAGTGGATGGGCTTACTCTCTAGTCGCTGTGCGTGGACTTCTCATTGTGATGGCTTCTCTTGTTGCAGAGGACAGGCTCCAGAGTGTACAAGCTCAGCAGTGTGGGGAATGCGCTTAAATGCCCCATGGCATGTAGGATGTTCCTGGACCAGGGATAGAACCTGTGTCCCCTTCATTTCAGGATTCTTAACCACTGGACTACCAGGAAAGTCCTACACTCAGTTTATTTGGAACAAAT EMBV3_20778 CAGCCATGATCTCGTTAACGGACACACAGAGTTTTATTTGTGGCTGGCTTGGCTTTTGTA Variant GeneID:515866|GOLT1B:NM_001046215:31_cdna 143^234 2 EMBV3_40399 GeneID:515866 5 GENE GOLT1B MGC134250 golgi transport 1 homolog B (S. cerevisiae) EMBV3_24095 CCTGGGGCTCTCCGTCAACAGCAAGATCAAGAGTGGGGAAACTGCAAATAAACCCCAGAA Gene GeneID:510738|AFAP1L1:NM_001100334:43_cdna Constitutive 0 NULL GeneID:510738 7 GENE AFAP1L1 NULL actin filament associated protein 1-like 1 EMBV3_28342 CACTCACTGTCTAAATAGCAGAGGATGAGAGCCCAGAGGTAACAGGACAGCTTCGGGTGA Gene BVT0101_031714 + 0 NULL GK000007.2:18567875-18573967 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219369 1 XLOC_132688 NonCoding TCONS_00219369 XLOC_132688 NonCoding NonCoding - 7:18571936-18572209 - TSS163367 273 1 TCONS_00219369_1 53 0.89010989010989 1 0 0 0 0 0 0 0 0 0 0.00047687595267358 5.0237984250798e-06 0 0 0.000956426433706802 0.000287179153123679 0.000143771284488237 0.000290237260394087 0 0 0 0 0 0 1.12015234543381e-05 0 1.26895210891732e-05 0 0 0 0 8.80914973352608e-05 XM_005222229.1 BDKRB2 PREDICTED: Bos taurus bradykinin receptor B2 (BDKRB2), transcript 4e-68 260 91.76 0.663003663003663 0 noncoding 0 0 0 0 0.264578346852533 0.183853467304757 0.138485888682263 0.0318494954217897 TGCCACATCACTGCATGTTTACTCATGGCTGAGACAATTCACCCGAAGCTGTCCTGTTACCTCTGGGCTCTCATCCTCTGCTATTTAGACAGTGAGTGAAAGTTGCTCAGTCATGTCTGACTCTTTTCGACCCCATGGACTATACAGTCCATGGAATTCTCCAGGCCAGAATACTGGAGTGGGTAGCCTTTCCCTTCTCCAGGGGATCTCCCCAACGCAGGGATTGAACCCAGGTCTCCCGAATTGCAGGCGGATTCTTTACCAGCTGAGCCA TCONS_00215833 . 5' 4063 TCONS_00215833 . 5' 4063 EMBV3_28387 TGCCTCAACCCTCTCTAAATCGATATGTCGTGAAGATGGTCCTTCCCCAGGGTCCTGTGT Gene BVV0102_227477 - 1 EMBV3_11972 GK000019.2:38246284-38253557 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09749 GTGAGAGCATGTCTTCCTTTTACCCCTAGCACTTCACACAGTTCCTGACACCAAAGAGGC Gene GeneID:618696|LOC618696:XR_083836:128_cdna Constitutive 0 NULL GeneID:618696 13 PSEUDO LOC618696 NULL similar to trophoblast Kunitz domain protein 5 EMBV3_29663 ATGCCCAGGAGTGCTGTGACTGCCATGACACCGAAGATGAGTGTATCCTTCGAGCAAGTA Gene GeneID:528098|PCSK5:XM_002689666:8_cdna Constitutive 0 NULL GeneID:528098 8 GENE PCSK5 NULL proprotein convertase subtilisin/kexin type 5 EMBV3_41977 GAAGCCCACAAGGAGTGCATGAGAGCCCTGGGATTTAAGATATGAAATGGTGAGCATGGT Gene GeneID:100295800|LOC100295800:XM_002684734:134_cdna Constitutive 0 NULL GeneID:100295800 1 GENE LOC100295800 NULL similar to COX17 homolog, cytochrome c oxidase assembly protein EMBV3_35889 TTTTTCACTCATGCCCCTTTTCTGCTCCAGAATCTCCTGGGGGACCCTACATGACACTCA Gene BVV0102_414960 - 1 EMBV3_32929 GK000013.2:58092014-58207118 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01891 TCTTACAGGGGAATTAGAGTATGCTACAAACTTCGCCGACATGAGGTGACCATCTGCAAT Variant GeneID:506494|MGC159500:NM_001098890:81_cdna 484^592 1 EMBV3_01945 GeneID:506494 2 GENE MGC159500 NULL hypothetical LOC506494 EMBV3_35365 CCGTTTGTTAGCTATGCCTGAACCAGCTAAGTCCGCTCCTGCTCCTAAAAAGGGCTCTAA Gene GeneID:505183|LOC505183:XM_002697515:230_cdna Constitutive 0 NULL GeneID:505183 23 GENE LOC505183 NULL similar to histone cluster 1, H2bd EMBV3_38574 AGGGTCCCGAACTCTGTGACTTCCTATAATTGTCCCAGGTTGACCTCTCCTTACCCACTT Gene BVV0102_159925 + 0 NULL GK000021.2:57742175-57825111 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00124903 1 XLOC_076446 NonCoding TCONS_00124903 XLOC_076446 NonCoding NonCoding - 21:57819640-57820529 - TSS93662 889 2 TCONS_00124903_2 73 0.0798650168728909 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000653605109791839 0.00397783033657319 0.00146763438291778 0 0 0 0.000292151374219333 0 0.00098060840428293 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.099866852130373 0.550481578794046 -0.0632622088955574 0.417319608118116 CTTAGGAATCCCCTACGGGAGGGAGGAGGCGCTGCTTGGAATGCATGAAGCCAAACCGGTTTGGGAACCGGCTTTCGGGAGGGGTCTCCAGCGTCTGGTTTCTTGTCCCCCACCCCATCTCGCACCCTCGGACTTCTGGACATTGCTTAGGGCTGCCCTCTGAAGTAGATTCTTTCGATCAGCCCAGCCCAGCAGGCGCCCAGGGAAAGCTTCAGTGGGTTGAAGAGGTTCCTGTTCAGAGGCAAATTACTGGGCAAACCTCTTAGACCCTTTCTGGGGATGAAGGATGGTGGGCGCCCTGGGGGAAGCCAGGCTCGAGCGACTTCTGTGATGGGCACCCAGTTGCTGCCTGGCCTAGCTCTGTGACCTCAGCTCCGCGGGCCTCAGTTTTCCCCAGTGGTAAAACCAAGCGACGGGCTGTTCTCGGGCAGCCCCGAATTGGGGAGCAGCTGGAGGTAACTGGCCCTAGGCTAGTGGGAGGGGTGTCTCAGAGGAACCGGAGAGCACTAGGTCCGAATGCCTCCGCTCTCCCCCTCCCCCATTTCCGTCCTAGCCTGGATCCTTTCCCTTGGAAGTGGAAAGACAATTGTCATCCGCTGGAGGAACTGGAAATTTTGTTGGGGAGGGCGCCCCCCCAGAACCAAATATCTACCACATCCAGTACTGATGGGTGGACCTAGGAGGAGATTCCCAGGGAGGAAGGCGAGGTGAGGGGCCAGGGTCCCGAACTCTGTGACTTCCTATAATTGTCCCAGGTTGACCTCTCCTTACCCACTTCCTCTTGCCTTTCTCTGTTTATTACTGGGTCAGTTATTAATACTTAACCTCTCTGTGCCTCATTACTTACCTAGAAAATGAAGATAAGTAATAATAACTACCCTTCAGAGTT TCONS_00119855 . 3' 671 TCONS_00119855 . 3' 1559 EMBV3_07687 GCCCCTCCTGAAGTTCCTGAGACTGGAGATCTGGATGATGATTCTGAAGCTATCCTCGCT Gene GeneID:614124|LOC614124:XM_002692143:129_cdna Constitutive 0 NULL GeneID:614124 13 GENE LOC614124 NULL similar to Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (hNRP) EMBV3_31919 CATACTGAGAGATGCCTGTTATATTCTTGGTTCTATCAGAGACTGATTATAAGGCCTATG Gene GeneID:509761|SPAM1:XM_002686914:136_cdna Constitutive 0 NULL GeneID:509761 4 GENE SPAM1 NULL sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) EMBV3_12271 TCGAGTAGAGAATATTAGCCATACAGAGCCTGCCATGAGCCTTCACTTGTATAGTCCGCC Gene GeneID:100296774|LOC100296774:XM_002684744:199_cdna Constitutive 0 NULL GeneID:100296774 1 GENE LOC100296774 NULL similar to cysteine dioxygenase EMBV3_30189 TTCCCTCCACAGGGTTTGCTGAAGCAGGTGTGGCTTCACTGGACATTCCCCCAACTTCAA Gene BVV0102_338045 + 0 NULL GK000002.2:107133479-107145510 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35698 GATCTTCTTGGCACATGGCGCCCCAATGGCCCTGAGTGATACTCTATAGCAGCTCTGCTT Gene GeneID:513545|CLCN7:NM_001025331:153_cdna Constitutive 0 NULL GeneID:513545 25 GENE CLCN7 CLC-7 CLC7 chloride channel 7 EMBV3_16995 CCTGAAAAGGTTACCAAAAGAATGTATGATAGCTTCTGGAGGCAGTTCAAGCACTCTGAG Gene GeneID:538226|SESN1:NM_001101174:59_cdna UTR3_Alt 2 NULL GeneID:538226 9 GENE SESN1 NULL sestrin 1 EMBV3_09378 CCTGGTTCTGGGCAACGTCAACGTGACACTCCTGCCGCTTCCTCCTCAACTCCAGGGTGA Variant GeneID:520173|TMEM120A:NM_001079600:209_cdna 406^494 1 EMBV3_06303 GeneID:520173 25 GENE TMEM120A NULL transmembrane protein 120A EMBV3_28454 AACCTGTTTTTTCTCTGGAGCTGATCTTGGAAACCTCTGCAAAGAAGCCGCCTTGCTGGC Gene GeneID:533070|SPATA5L1:NM_001105625:83_cdna Constitutive 0 NULL GeneID:533070 10 GENE SPATA5L1 MGC138016 spermatogenesis associated 5-like 1 EMBV3_06464 GATCCCTGTGACCCGACCTTGGAGGAGGAGGCATATCATGGAGCATCTCGAAGGTGTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28249 TGCCGGAGACGTGAGGAAGAGCCGGCACCGAGCTGTGCTGCCATCATGCCTCGAACCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35176 TTAGTGTCCTCTCTGCTGGACTGTGATGTGCTGCCTGGTATCTGCATGTGCTGGTCACTT Gene GeneID:534704|TPD52L2:NM_001034615:1213_cdna Constitutive 1 NULL GeneID:534704 13 GENE TPD52L2 MGC127604 tumor protein D52-like 2 EMBV3_01967 GAGAGCTCATCTTCGTTGGCATTCTGGGGAGCGCCCATTTATTTGTAACTGGATGTTCTG Gene GeneID:540766|SP3:XM_002685296:106_cdna UTR3_Alt 2 NULL GeneID:540766 2 GENE SP3 NULL Sp3 transcription factor EMBV3_04245 AGGCCCCCAAGTCCCTTCCCATTTTACCAGAAGCTGCTCCAGACACCAGCGAAATAGAAA Gene BVT0102_272856 + 0 NULL GK000010.2:8894091-9040250 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15838 TGCCTGCTATGTGCCCACCTCCTCCTGCCAGTCCAGCTGCTGCCGCCCAACCTCCTCCTT Gene GeneID:617218|LOC617218:NM_001079791:47_cdna Constitutive 0 NULL GeneID:617218 1 GENE LOC617218 NULL keratin associated protein LOC617218 EMBV3_05463 CCCCATACTTTGTATTGGAGAGTACAATAATGTAAATCCTAAAAGCACCACTATTTTAGC Gene GeneID:789148|LOC789148:XM_002688959:104_cdna Constitutive 1 NULL GeneID:789148 7 GENE LOC789148 NULL similar to Ras-related protein Rap-1b precursor (GTP-binding protein smg p21B) EMBV3_26759 CTCTGCATCAACCTCAACTCCACTCTGTTCAATTTGGGTCTAACGAAGTGCAGCTCCCTG Gene GeneID:507644|CCDC138:XM_002691278:349_cdna Constitutive 0 NULL GeneID:507644 11 GENE CCDC138 NULL coiled-coil domain containing 138 EMBV3_32722 GAAGCAGGAGCATGTGGTCTTTCTTCTAAGAAGCCTAATGTTTATCTAATGTGTTAATTG Gene GeneID:280849|LYZ2:NM_180999:4_cdna Constitutive 0 NULL GeneID:280849 5 GENE LYZ2 MGC129123 lysozyme C-2 EMBV3_20277 GTTCCTGGATGCTTCTGGATGCCCGATATAACCCTGATACATGCTGGAGGTCTAGCTCAG Gene GeneID:616003|TM6SF1:NM_001102295:54_cdna UTR3_Alt 3 NULL GeneID:616003 21 GENE TM6SF1 MGC159520 transmembrane 6 superfamily member 1 EMBV3_04387 ATGTTCTTCTTTCACCTGCTCGGGGGAGCGGATGTGTTTTCCCTCTCGGTGATGGCCTTT Gene GeneID:514366|LOC514366:XM_002693837:131_cdna Constitutive 0 NULL GeneID:514366 15 GENE LOC514366 NULL similar to Olfactory receptor 4D9 (Olfactory receptor OR11-253) EMBV3_04823 TGATGATGCCAAACCAACCGTTTCATCTGTCGTCCCCTTCTCCTCCTGCCGTCAATCTTT Gene BVT0102_019708 + 0 NULL GK000025.2:10325020-10359273 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144516 1 XLOC_088578 NonCoding TCONS_00144516 XLOC_088578 NonCoding NonCoding - 25:10351620-10353321 - TSS108481 1701 5 TCONS_00144516_3 107 0.590828924162258 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.73057947652972e-05 0.000860468378902895 0.000478254343923324 3.84215026627072e-11 0 0 0 0.000211873997778432 0.000109579653982001 0.000507453340786827 0 0 0 0 4.71331810361249e-05 8.55452256054384e-12 XR_229810.1 LOC101907661 PREDICTED: Bos taurus uncharacterized LOC101907661 (LOC101907661), 4e-103 379 100.00 0.122868900646678 0 noncoding 0 0 0 0 -1.37140922026832 0.0051303807179429 -0.669285479299914 0.0013959914624402 TTTAATATTTTTATTTATTTATGTATTTATTTGGTTGTATCGGGTCTTAGTTGCAGTATGTGGGATCTAGTTCCCTGACCAGGGATTGAACCCAGGCCCTCCGCATTGGGAGTGCAGAGTCTTAGCCACTGGATCACCAGGGAAATCCCCAAACGAATTCTTGACTCTTGTTTTTGATTCCGTTTCTGATTCTTGCGGGGTGGAAAGAGGAAAGGTGCTCACAAGGGCAGAGGCCAGAGCTGCTCTGTCACCAGGGACTCTCCTAATGCAGCCAGATGCAGGTCCCCAGGGCTGCTTTCTTCTGGGTAATTTGGTCACAGTTTGGTTCGAGGGGTCAGACCGTATTGTCCTGCCTATTTAGATTTGCGCGGTCACAAAGAGTCGGACATGACTAATTACGCATGCATGCATTGCAAAGGTGGAGTAACATTCTCCCCTCCAACTACCAACTCCTGGAGGGCAGGGACCCTGCTGATTCAGCATGGATGGACTCCTGGGAGAGCCCCCATAGGGAGCAGGCAGTCAGGGAAGGCTTCCTGGAGGAAGCGGCACTGGTTGAAGCCAGAGTTCGATGCAGGGAGGAGCAGGAAGGACACTGTCTTACAGAAACAGTGAGATGGAAGGTGTGGCACACGGACAGACTGAGCAGACAGGTAACCCTAGGCAGCTCTGGCTGGTGGAACCGGAGCATGGGGTGGGGAATGGGGAGCCAGAGGAACGGCTGAACAGAGAGAGCGTTCGAGAAAGCAGGATTCAGATTCAAGACAACCAGCCTTTCCCTGACTCCTGGTGCCCGATGACTGGGCAAAGCCACTTCACTTGCTAAACCTCAGTTTCTTCATCTCTAACGCTAGGAAAGATTGACGGCAGGAGGAGAAGGGGACGACAGATGAAACGGTTGGTTTGGCATCATCAACTCAATGGACATGAGTCTGAGCAAACTCTGGGAGATGGTGAAGGACAGGGAAGCCTGGCGTGCTGCAGCCCAAGGGGTTGCAAAGAGTTGGACACGACTGAGCGACTGAACAACAAGATGGAAGCAATGGCAGTGATGAACATCGCTGCTCTGGGGGGTCCCTTCGCTCTCTGCCAGGCCCTGGGTCTGCATTTACCTGCACGTCTCACTCATTCCCATGACACCCCTAGAAAACAGGGGGCACCTTTATCCCCATTGTACAGATGGGGTGGTTGAGGCTTATGAAGGTTCAGGAAGATGTCCTGGGTTCCAAGGTTCAGGATTTGAACCCAGATCCCAGGATTTGAAGCCCAGGCTCGAACTGCCCCTAGGAAGGAGCAGGAGGGATGCTGCTTGGAATGTGAACACAGTTGTCTCTCTCTTTTTTCCCTCCCTGGGGTGGCCATAGCAGTTAGCACAAACTGAGTGGCCTTGAAAAAAATAATTGGGGCTTCCCTGGTGGTCCAGTGGTTAAGAATCCACCTTGCGATGCAGGGGACACAAGTTCGATCCCTGGCCCAGGAGGATCCAACGTGCCTCAGGGCAATAAGCCCACGTGCCACCAAGACTGAAGCCCACTCGCTCTAGGAACCATGCTCCCCAGCAAGAGAAGCCGCCGCAGTGAGAGGCCCACACACCGCCTCTCCAGGGTAGCCCCTGCTTGCTGCAACTAGGGAAAGCCCACACGCAGCAACGAAGACCCAGTGAAGCCAAAAATAAATAAATATAATTTTAAAAATCGGACA TCONS_00146210 TCONS_00146211 r 5' 26583 TCONS_00146210 TCONS_00146211 r 5' 26583 EMBV3_25579 TGACAGACACACAAAACTAAATCCTTGTGAATATGGATCTAACAGGAGAAACAATGCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27278 GCGGTGGCGGGACCCGCGGCCATCTCTCAGTTGACGAAGGATCAGAGATTGGTGTATTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37194 TAGACAGTGAATAAGGGAAAAATTACCTTCATTTTCACCACACCAACACTTAGGACTTCC Gene GeneID:100137989|LOC100137989:XM_002697772:324_cdna Constitutive 0 NULL GeneID:100137989 24 GENE LOC100137989 NULL hypothetical protein LOC100137989 EMBV3_04091 CGACCCTCTCTTATTCCTGTCTTCGGGGGGACCACAAGCTATAGTGTCCTTGACTGCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32118 AAGAGCTTCTTGCTGAACCTGGGCAAAGACCACAACTACCTGTGGCTCCACATCAACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17439 GAAATCATGCGGGAGGATGAAGCTGTGAAGACATTCTAAGAGCCGCCCTGGAGTTGGATC Variant GeneID:531747|LOC531747:XM_002697288:82_cdna 739^829 1 EMBV3_40363 GeneID:531747 23 GENE LOC531747 NULL similar to soluble adenylyl cyclase EMBV3_21509 TCACCTTGGACAGGTCTTCCCATTGTCTGGCCATCGAAACAGAAATAGTAATAGAGGACC Gene GeneID:100336681|LOC100336681:XM_002690975:373_cdna Constitutive 0 NULL GeneID:100336681 10 GENE LOC100336681 NULL SECIS-binding protein 2-like EMBV3_33049 TGACCTGACACTGCAGAAGCTGTTGACAACTCAAATACACTGCCCCACCATGCCTCTTTC Gene BVT0102_043552 + 0 NULL GK000008.2:91796895-91818659 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233526 1 XLOC_143008 NonCoding TCONS_00233526 XLOC_143008 NonCoding NonCoding - 8:91799375-91801333 - TSS175030 1958 1 TCONS_00233526_2 79 0.110316649642492 1 0 9.7282759320519e-05 6.15838728564786e-05 0.000118156275800657 0.000568312409309481 0.000234504015802481 0.000281341368845984 0.000494414136639061 0.000444056252617708 0.000556097178626382 0 1.16914320471939e-06 0 0 0 0 0.000418161204846549 0 0 0.00034792573500545 0.000213025095619383 2.79076194979577e-05 5.68488762555748e-05 0 0 0.000785558328180072 8.2760927565077e-05 0.000107727027394347 0 0 7.98357099450835e-05 XM_005193674.1 CCPG1 PREDICTED: Bos taurus cell cycle progression 1 (CCPG1), transcript 2e-14 86.0 73.38 0.0776302349336057 NM_198468.2 MMS22L Homo sapiens MMS22-like, DNA repair protein (MMS22L), mRNA. 1e-09 69.8 91.67 0.0240040858018386 0 noncoding 0 0 0 0 -0.178360755383305 0.291950279951177 -0.0838759896174853 0.209768979246587 AGGTGGAGATTCAGAAAGGAGAGCAAATTCACTAGATGTAAGACCCTGATGAAGATTTGTGCAAGGAGACATGTAATTGGGAGGACGTGGAGTAATTTCCAAATTCGGCAGTAATGTGATCAAAACGGTGCTCCAGGAGGAAGATTAGAAGATGGAACTGAGTTTAGAGAAGACGAGTCCAGAAAACAAGGTAGGAGGGCTTGGCTCTAGTTAGGATGAGATGATAGGAGGACCTAGAGGAGGCTGTAGTGCAAAATGAGGGAGACCAATGTGAAGGGCGGGAGAGGCATCACTCAGGCTTGGTAGATTTCTATTGTTGAAGTGGATGACTAGGGTTTTGAAGTCGATGCCTGAAAGAATGATGTTGATTGAAACAAAGCAAAGATGCGTCTGGCTGACAATGTCCTAGGGGAAGCCTGGACGCAAACTAGTGCAGTTGCTGCCGCTCAGCCTGGAACACCAGCTCCTCCTCTCACCTCCTCTTTGGCTGGCGCCTCTTTGCTCTGACTTCTGCCACTTGGGCTGCCTGTGCTGCTCCTTGCACCTGTTCAGCTGACGTTTTAACCCCTCCTCGCTGGGTCCTCATCACCCGACTCATTTGGTGCTGTCTCTGCCATCAGGACCTCCACTGCAGCTAGTGGTGTATCAGTCACTGTCTCTTATAAAGGCTTCACACTTGAAAGGTCAGGAAAGACTATCGTTGACCCTTAACAACTGGGGGGCTAAGGGCACCAACACACCCTAGCTGTGGAAAATCCGCCTATAACTTTACAGTCAGCTCTCTGTATCTGCAATTCTGCATCTGGGGATTCAACCAACCGCAGATGGTGTCGTACTATGGTACCCAAATATTGAAAACAATTTGAGCATAAGTGAACCTGCGCAGTTCAAACCTGTGTTGTTCAAGGGTCAACTGATTTCTTTTATCTTGGGCTTCAGTTCTCTCCCAGTTGGCACCTACAAATTTCAGGGTATTTTTTAAGCGTCCCTTGTTGTGTAAAGACGCACTGACTGAGAGGCTAATTCCCACGTATGCCTATTACAGCCCCTTTACAATAATCAAACATAGAATCCTACCTTATTATGCATTAAAAATTAGGAAATATTTTAGGAACTTTTCAGGGAGAATCTTAAAATACATTGTTTTTATTTTATTTTATTTTCTTAAGACAAGAGCCAACAGAAGGAAAGAGGCATGGTGGGGCAGTGTATTTGAGTTGTCAACAGCTTCTGCAGTGTCAGGTCAATTACATCAGCACTTGGTCTGGACCAGGGGAGAGGAATGGTTCTGCCTCCCGGGAATGTCAGAAGGACCTGATAATTATATTTGGCAAAGCCATGAAGAGTGACTCTGTAATGTCATTGCAAAGAATTACTCTCTTAATAGCATCTCTAGATGTCCAAGCTGTTCAAATGCAATAGCACTTCTTTTCTGCTGCAGCTTTCCTTTCCGCTGGGCTGTTTCCCAGCTGGTCCTCTTGTTCTTCCTTGCCCTTTTCTGTCTTCTGCCTTCCCAGCCCTGTTTCTGCAGCCCCTCCTTCTGCACCCACAACAGTCTCTGCTGACCCCTGTTTTAGAGTTGGAGTCACCTGAGAATGTGTGTGAGGGAGATACTTGCCAACACCCAGCATATTGAACATGTGGTATCAACAAGGTGAAGTGTGTAGCCTTAGACTAGCCATAATATCGACCATCTGCTTCCTTGCGGCATCCGCTACTTCTGTGTTGGTGGAACTCAGATGTCGCGGGAAAGGTCACCGGTGATTCATGACTGCAACAAATTCTTTTCCTAATTGTGCCATATGTTATGCCCTTCAACACAACTTACTAATCTCTGCCTCGGTTTCTCCATCTGTGAAAGTGGTGTAATACTTATCTACCTCCCTTGAATGTTGTAAAGACTAGTCTATGTTAGTAAAGCACTTTTGAAATAAAGAGTGATGTAAAGCGTTTTAACA TCONS_00226232 TCONS_00226233 TCONS_00226234 TCONS_00226235 TCONS_00226236 TCONS_00226237 TCONS_00226238 TCONS_00226239 TCONS_00226240 . 5' 17327 TCONS_00226232 TCONS_00226233 TCONS_00226234 TCONS_00226235 TCONS_00226236 TCONS_00226237 TCONS_00226238 TCONS_00226239 TCONS_00226240 . 5' 17327 EMBV3_09587 GGGCCCAGGATACATAGATACCAGCATCCGACCATGGAACTCTCATAACACTCGTAACCG Gene GeneID:512853|MANEA:XM_002690176:4_cdna Constitutive 0 NULL GeneID:512853 9 GENE MANEA NULL mannosidase, endo-alpha EMBV3_27074 AGCACACGCCCCTGGTGATGCTGGGCATGGGCTTTCATCCGGCCATTCCGGGAGCATCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15187 TGTTCATCTGGTCATCAAGACCCCTCAGAACTGGCTTTGGGGGCATCCTGGGCTTGGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00168 CCCTGGGGCCATGGTACTCTGTATTCTCTGCACCAAGTTTTTCTATACTTGGCCACATCT Gene BVT0102_443098 + 1 EMBV3_30303 GK000001.2:73418805-73467723 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16501 CCACCCTTGTGGGGGATGGGGGCAGCAGGATTTTTTGTACCAAGTGAATTTTTTTTTTTT Gene GeneID:282640|DCPS:NM_174695:5_cdna Constitutive 2 NULL GeneID:282640 29 GENE DCPS HINT-5 decapping enzyme, scavenger EMBV3_37812 AAGAGTACATCCAGAAATATGCAACGGAGGAGGCACTGAAAGAGCAGGAAGAGGGCACTG Gene GeneID:539313|UBE2H:NM_001037614:15_cdna Constitutive 0 NULL GeneID:539313 4 GENE UBE2H E2-20K MGC134106 UBCH2 ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) EMBV3_08821 GAACGCTAATACCAAAGATGTTCTCCCACTATTGTAAAGGTTCTGAGCCCCACGGCAGGC Gene BVV0102_243664 + 0 NULL GK000018.2:2792488-2799049 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085226 1 XLOC_051819 Coding TCONS_00085226 XLOC_051819 Coding Coding BCNT2 18:2794007-2838902 = TSS63695 8578 1 TCONS_00085226_4 634 0.639659594311028 10 0.809150443266361 0.000175141587081584 0.000176494185450658 0.000236304952985533 4.77399055185803e-05 0.000182706682867273 1.87697475674843e-05 2.38448846558323e-05 6.2134389081208e-05 4.90993677001705e-05 6.40144889634839e-05 3.78031672597904e-05 4.74764870892209e-05 8.46810800056547e-210 0.000132291787029691 1.71531058300665e-05 0.00394569255250417 0.000994198616944945 0.0020245563930696 0.000410041239443943 0.00078666274832719 0.000164195002186147 0.00109222463163241 0.00126902422512594 0.00212809279608538 0.000184944024521438 0.000266735054984523 0.000134106959751392 0.000547020443197549 0.000272113387070253 0.000235512534051917 NM_001077919.2 BCNT2 Bos taurus bucentaur-2 (BCNT2), mRNA. 0.0 6302 100.00 0.407204476567965 NM_006324.2 CFDP1 Homo sapiens craniofacial development protein 1 (CFDP1), mRNA. 1e-169 603 81.89 0.0699463744462579 TCONS_00085226_4 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 0.0 941 76.38 0.998422712933754 2 coding 0 0 0 0 0.181062309734708 0.683939520706837 -0.0206582082916631 0.772577038975458 CGGAAGTGGTGGTTCTCGACCTAGCGCCGTTTCTGCGTGTGCGCACGCGCCGCCGGAGCCGCCGCCATCCCCGTCGCCTCTGCGCACTCCGCGCTTCTACCGTCTCTCCCTAGAGCTTTGCCGTTGGAGGCGGTTGCTGCGGCACCGTAGGCCCCGCGCGGCAGCAGTATGGAGGAGTTTAAATCCGAGGATTTCTCCGTGTCGAAGGAGGACGAGGACTACGCGCCGTCGGGTGGAGAATGTCATGAAGATGCTGTAAATGAATTAGTGAAGGAAGGTGAAATGGGTGCTGAAGAGGAGACACAGAAAACCAAAGGGACAAAAAGAAAGGCTGAGAGCATTCTGGCCAGGAAGAGAAAACACAGTGGCCTCTCACCACAACACGAGGAAGAGGAGGATGCCAACAGGGAATCTGGAGGGAGTATTAGTGAGAAGGAAGATGTAGCTGCAGAGCAGGAAAAAGGCGCCGAGTCAGAGGATGCCAGGGAAGAGGAGGAGGAGGAAATGTTGGCCAGCTCCATCGGTGATGTAGAACCAAAATCAGAAGTGCCTCCGAGTACACAAGTTAAAACAGGAGAGGAGAATAAAGAGATGGCTTCAAGTAAAGTGGTCAAAACAGAAGAACAAGAGAAACCTAAAGAACCAGAAGAAGTTAAAGTCACCAAGGTGTTTGATATTGCTGGTGAAAAAGTCAGGTTTCTCAGGAGACAGGGAAGGCCTGGTATGTCCCCGGAACATGAGCCCCCCAGATCAGAAGGTGGCCAGCATGCCACTGGGGAAGAGCAGAGGTCAGTTACTAATACTTCCAGTAAGAATGAATCGACTAAGCGAAAGTGGAAACGACGTGCAAATGTGGTCGTGACTGGTGAAGAAAGCAAACTCCGATGCTGTAAAGAAGAATACTGCATAGGAACCTGGAACGTGAGATCTATGAATCCAGGTAAATTGGATGTGGTGAAGCAGGAGATGGAAAGAATAAACATCGATATCTTAGGAATCAGTGAACTAAAATGGACGGGAATGGGCGAATTGAATTCAGATGACCATTATATCTATTACTGTGGGCAACAGTCTCTTAGAAGAAACGGAGTAGCTATCATAGTCAACAAAAGAGTCCGAAATGCAGTAATCGGGTGCAATCTGAAAAATGACAGAATGATTTCAGTTCGTTTCCAGGGCAAACCATTCAACCTCACAGTAATCCAAGTCTATGCCCCAACTCCCTATGCTCCAGAACCTGAAGTTTACCGGTTCTATGAAGACCTACAACACCTCTTGGAAATAACACCGAAAATAGATGTCCTTTTCATCATAGGGGATTGGAATGCAAAAGTAGGAAGTCAGGAGATACCCAGAATAACAGGAAAATTTGGCCTCGGGGTACAGAATGAAGCAGGGCGAAGGCTAATAGAGTTTTGTTACCAGAACAGGCTGGTCATAGCAAACACCCTTTTCCAACAACACAAGAGACGACTCTACACATGGACATCACCAGATGGTCGATACCGAGATCAGATTGATTATATTATTTGTCGCCAAAGATGGAGAAGCTCTGTACAGTCAGCAAAAACAAGACCTGGAGCTGACTGTGGCTCAGATCATAAGCTCCTTATTGCAAAGTTCAGGCTTAAGTTGAAGATAATACCAAAAACAACTCGGCCATTCAGGGGGACCAATGAAGTGGGTGAGACCTCTCAAGAAGCAAAATCTGTGTTCAAACAAACTGAAAAGGGCAAACCTCAGGCTAATGTCCCTTCAAATGTGTCATCAGTTCCTGGTGGATCAGGGGTTTCTAAGGAAGTAGGTGAAACATCTCAAGAAGGGAAATCTGTCTTCAAGCAAAATGAGAAAGAAGAACCTCAGTCCAGTGTCCCTTCAGCGGTGCCATCACTTCCTGCTGGGTCAGGGGTGTCTAAGGAAGTGGGTGAAACTTCTCAAGAAGGGAAATCCGTCTTCAAGCAAAATGAGAAAGAAGAACCTCAGTCCAGTGTCCCTTCAGCGGTGCCATCACTTCCTGCTGGGTCAGGGCCTGAAAACTGTGACCTTGAAAAGAACCAGGACTGCAGCAATTAAGTATCTGACTTTATCCTTAACCACCTGAACTGAGAAGACTCTTGAGAGTGCTTGGAGCGCAAGGAGATCAAACCAGTTAATCCAAAAGGAAATCAGCTGCATATTCATTGCAAGGACTGTTGCTGAAGTGAAGCTCCAATACTTTGGCCATGTGATTTGAAAAGATGACTCATTGGAAAAGACTGAGATACTGGGAAGAATTGAAGGCAATAGAAGAATGTGCCAGCAGATGATGAGATAGTTAGATAGTATCATCAACTCAATACACATGACTTTGAGCAAACATCAGGAGATATAGTGGAGGACAGAGGAGCCTGGTGTGCTTCAGTCCATGGGGTCGCAAAAAGTTGTAAAATGTGTTTTTGTATTTCCTTTAGGTTCAGCTTATTAGTTTATAGTAACATTCTCTTCCAAAGATCTGATTAAACACTGCTTACTTCTTGAGTCTTATTAATTCAGCTTTCGGGACTATATGTTAACATCAAAAACTTCTGTATTTCACACTGGGATAGCAGAAAACTGGTAACAGTTTGTGGGGGGGAAAAAGGTATCGTTTCAGTAGTAGGTCCAATGAGAAGAGGCTCTAAGGTTGGCTCAGTATTCTGTGACATCCTAAATCTGTTTCTGCTCTGCCACTTTCAGCAAATTGAATGGTCCAATTTGGTTGCTTATCCCACAGTTACAAGGAAACAGCTTCAGTTCCAGGCAATGCAGACAGACAGTGTCTGGCAGGATCCTACCCTTTCAATTCTTTTTTTTTTTTTCCTTGTATACTGTAAAGTGCACAAATCTTGTATGATAAAATTTTACTCATGTGAAGTGGTAGCACTTTGATCAAGATACAGAATGTCTCTAGCACCCCAGTAGGATACAGAGTTCAGCCAGAAGCCTCAGTATTGTTTCCCAATAGGATCTTTTCATATCTAAAAAGGTGATGACCCAAGATTGGACAGGGCACAGAGAGTATAGTGGATGAGATGGTAAAGATGTTGAGTTTTGTAGGAAGGACTCCATAAATTATTGCCAAGACAACAGGGTAATAGCAAACCAGGAAACTTAATAGGGGGTTGGGATTTGTATTTTTCCCAACTGGAGACATTTGTCTAAAGGGATTCCTCAGTTTCAGCCTATTTCTGCTTGATGGGATTACGTGCCCTGTGTTGGCAGATTCTCTGGTTTCTGAAAGGAAGTTGGGAATCTAGATTACTGGAAAACACTCAACTTCTAAATGCTTATATATTGAGTATTCCCCCCACCACAAACAACAGTAGAAACAGCATGAACCAGTTCCAGTCTATAAGGTCACCACATATATTCAATTAGTGGAAGTACAGGGTTGGGTACCTGTGGGACTCTGGACTTTCTATATTTGTCAACTGATCAGTACGTAATCCTGTTTTATGTGTGTTTGTGTTGAAAGATGCTGTATGTAATCTTTGTAGCAAATAATGATAAGCAGTATATGCATGCGTTCTAAGTTGCTTCATTTGTGTCCGACTCTTTGTGACCCCGTAGGCTGTAGCCTGCCAGCATCTTCTGCCCATGGGATTTCCCAGGCAAGAATACTGGAGTGAGTTGCCATTTACTCCTCCATGAGGATCTTCCCGACCCAGGGATCAAACCCATGTTTCTTGAGTCTCCTGCATTGGCAGGTAGACTCCTGACTACTAGCGCCATCTGGGAAGCCTCATGCTGTATGTATAATGAAACAGTTGTTTGAATGACAGCAATGTTATGTACAACACTGAGATTGTGCTGCTTTGTCTTTCCCTCAGTTTTACACACACAAACTACAGACATACATTACACATAAAAGTACTCACAGTAAACATATAGTGTTCATATAGAGACATAGTCTGTTTAGTGATGCAAATAAAGTCTTGGGAAAGGAAAGATTGAGCATTCAACATTTTATAAAGCATTACCTAACATTTTCGTGTTGATGGAGCTGCAGGCTGCATAATGATACAGTGCACAGTGTGGTCAAACCTTTGGACCTTGGCTTAGCCCACCAAAACCAAGGGAGAGGTTGGTGGAACTTATTCTGCAGATGAGGGAGAGTGGCAGGTTGACATGGATCAGTTCAACCTTCAAGGTTTGGTTCTCACCACTTGTTGAGTGGAGAAATAGCTCCAGAAAGAAGAGTATGGGTGAAAGCGGAAACCTCAGTTGTGGATGTGTCTGGTGGTAAAAGTGAAGTCATGCTATAAAGAACAATATTGCGTATATACCTTGAATGTTAGACCCTTGAATCAAGGTAAATTGGACATGGTCAAGCAGGAGATGGCCAGGTTAAAGATCGACAGTTTGAGGAATTAGTGAACAAAAATGGACAGGAATGGGAGAATTCAGATGACCGTTACGTTTACTATGGGCAAATATCCCTTAGAGGAAATGGAGTAGCCCTCATAGTCAACAAGAGTCGGAAACGCAGTACTTGGGTGAAATCTCAAAAACAACAGAATGATCTCAGTTTATTTCCAAGGCAAACCAGTCAGCTTCACAGTAATCCAAGTCTATGCCCCAACCACTAATGCGGAAGAATCTGAACGACTGTATGAAGACCTACAAGACCTAGAACACCAAAAGATCCTTTTCATCATAGGGGATTGGAGTGCAAAAGTAGGAAGTTGAGAGAGAACCTGGAGTACACAGGCAAGTTTGGCCTTGGCCTACAAAATGAAGCAGGGCAAAGGCTAAGAGCAAGAGGAGAAAGGGGCGACAGAGAACGACGTAGTTAGATGGCATCACTGATCGTGAATGCAAGTCTGGAGACAGTGAAGGACAGGGAAGCCTGGCATGCTGCAGAGCTAGGTGGAACTCATTCTGCAGATGATGATGAGGCTGACAGGCTGACATCTGTGCAGCCTCAGAGCTTTGGGTCTGACTTGATGTAGTTGGCACTTTCCCCTCCTAAAGTAGCTCCAGAGACTGGGCCAGTCCTGTCTGCTTGGCTTTTTGCCTCACGTCTTTAAGCATCTCATCATAAGGGACAAACACACCGGAAGTTGATTTAAATTTGAGGCTTCGATCAAGGATAGGGTTACACCCTTCCATGTCACTGAAAATTTGTTTCAAGGCAGAGTTCCATTCTGTTACTTTGCTGCTATAAGAGGGACAGTTCTGGACTCTTCGGCTGACTATCATCACTGTCTATTGCTTTCTCTGCCAGAATTTCCTCCACATTTTCCTTCATGTCACCAAAGCCTTCACTTATTTGCTGTGCAGCATGCATTATGTTTTTGACACTGTTCTTCATTCTTTCTGCAGCACCTTCAAAGCCTTCGAAATTTTCCACACAGCCTGGCCAAACATTTTCCCAACAGTTAACAGGCTCGTGCTTGGTGTCCCAGGCTGTGCCAACATAATCACATTGGGTATAGTGACTGACTGCCAGTAGTTCGTCCATCACGGTAGTTTCCTTGTTGGCTTTGAGAGCTTCGAAAGCCTTGTTACAAAGCTCCCTTGTGTACTGTGCCTTGAAGACATTTATTATGCCCTGATCCAGGGGCTGGATGAGAGACTTAGTATTTGGGGGCGTGAAAAGAACTTTTACATAGGGGTGGGCATTTTTGAGTTCTTCACAGCAGTGGACTAGGGCATTATCCAAAATTTAACAAAATCTTGAAGCCAAAGTTGCCCTAGAGATAGTATTCAACTTCTGGTTTGAAACAGCTGTGGAATCAATCAGATGTCATCCAGCCTTTTTTGTTCCACCTCCAATGGACTGCAAATGGTTCACACTTTCCCGGTGAAGGTCAAGTGCTGGTGAAATTGAAGCTCTCTACACCAGTAGGGGTTTGCACTTGAAGTTGCCCTCATACTCCATGTCCAAAGAAGCCGCAACAAGATGGTAGGGGTTACGCAATCATGATAAAATCAGATTCCACACTCGCCAGGTGAGTGACCCAGATACTGGAGAACGCTAATACCAAAGATGTTCTCCCACTATTGTAAAGGTTCTGAGCCCCACGGCAGGCTTCCCAGAATGGGGATCCAGCCAAGGGACTGGGTATCCCCAGGGAATCTGACTTTGATGGCGACCCGGATTTGATTACAGAACTTAACCTTAAATATAAATTGTAGTTATCTTACATGTAAATAGGTTAAATACACTAACCAAAAAATAGAGACTGGATGGTTGGGTGAAAACGTGCATGTGAACCTCCACTTAACACATCACTCTACTAAAACTCCCAAATTGTATGTAATAATTTTATATTGTTAGGTTAATCATTTCCATTATGGCTTACAATTCTAAGTATCCTATCTTTTTTGTATGGCTATTGATTTTGAAAACTGAAAAACAGCTTTTACTATTGTGATTATGTAACTAATTTGCTTCATACCATTGTATTGTGATTGGTCAACAGAAAATAGAATTCTTTATCACTGAAACTACCATTTAACAGAAAAACATGAAATCACTTTTTAAAATCCGGAATTATCTTGCAATTTTTTGAAAAATGGAAATGCCCAGGCATTGCTTTTTGTCTCCAGAGCTTCAGATGTGTTTCTAATGAGCAGACATGTTTAAAAACAACTGGACTGTGTATGATGTTTTACTTTTATCCAGTTCATTTCACATCTTCTATTTCATATTCAGTGCCCCCTTTTCATTTTGTTGATGGTTCCCAATTTCTCCATCTCTTTTGTTGCTGTTCTCTCTCAAAGTTCATGAAGCATAGTAGAAAAGCTTTTATATACATATATGTAAATAGTATGTATAACATTTTAGAAAACTTAAGACTTTTTGCATAGCTAAAAGTTTATCACATTTTGATTCCACTTGTTTGTCTTAGTATGAATAGAATGCTAGATTTCTAATTTACATTCAGTCAAAACTTTGATATAGTTCCATGTATTCTGGCATCTAGTATTTCTGCTAACAGTCTAGAAAGTTTATTGGTGATTTAAAAAAAATTTGAATTGAGGCTTGAAACTTATAAGAAATAGTATGTTTTTTTTAAAAAACAGGAAATTAACATGCTACGATATTTTGTACATGTTTTCAAATTACACAAAATTTTATGCTATTGTCCATTGTTTTTTTCCATACCATATTCAAGACTCCACATTGCATTTAATTGCATTGAGCAGCTTCAGCTGCAGGGAACAAATTCTGGTAAATTCTCTTCATTTTTATTCTATGATCAATATTTTCTAATTTTCCTTGTATGGCATCTTAGATACATCCATCATTTAAAATTGGACATTTAATTTTGAAATGCATGGGATAAAGCATCTTTGATACTAATTTCCAATTTTGCTGTTAATTTCTCATTTTAAATGCTTCCCTGCAATCACCCTCTGTGTTTTTTCCGTCTTCTATCGAAGCTTTCAATGGCTAAGTTAAAGAAGTCTCTTGAAAAATACCACATTGCAGTTGAACATATGTGGGTTAGTTTTAAATACCTTTTGATATTGATTTCTAACATAATTCCACAATGATAAGAGAATAGACTGTATGATTTCAGTACCTTTGGACCATTAAATTTTTGCACCTTGCTTTATGTCCTTGGATATGTTACAGTGTTTCCTAGTTTATAGTATATGGGACCTTGAATTTGTATTCTAATGTGTGAAAATTGTATAAATCTTAATGTTGAATAGGCTCATAGTGCTTTTCACGTTTACTATATCCTTGTCTTTCCTATATATTCATTCTATTAATTTTTGAGTTTGATAATGAAATTCCAACTAAATTCTTAATTCATCTACTTTAAAACAATTGTAATATATATTAATAGTGGAAATATATGTAAGTTTGTTCTGTATTTTCCAAGTGTTCTCATACTTTCATAATTTAAAAAATAAAAAGAAAAAAAGTCACTCTTGGCATTGGTGCACAAAAGTAGGGTTGCATAATTCTGGAATGATTTAAAGCCCAGGGGCTTTGGAGGCCATTTGCCTTATGTAAGTTCTTTTTGCAAATGTCCTTGTAAAATAAGCCAATTTCAACAGCACTAAAAACCTGCTCTTCCACATACCCTTTTCCTGTATATCACTTAGCAAGTATTGTTTAAATTCTTCTGCAGCCTCCTCATCTGCAGAACTTGCCTCACTTGTAAGCTTAACACTATTCGTATCTTGTCACCTTTTGAAATGTGCAAGTCAGCCAGCGCTAGCAGAGAAGGGCTTCACATTTTTCTGACCTTGGGTAACATGACGTAAATTTCTTTTGCTTTCAGCCTCAAAACAACGCTTTCCACCACACCTTTTATAATCAGTTGTCATCTTATGAATCCACAAACAGCCGCTTTTCCACATCTTCCTCACGCACTCTGGATGTCACTTTAGCACTTTATGGAGCAGCCTCACGTCTGGATTGGCAAATTTCCCTTTCCATTTTCTTGATGTATGAATCAAATTTTTGATTCATTAACATTGAACTCAAGGCTAACAGCACTACAATTCATACCTGAACAAAGCTTATGTAATACACATATTTTTCTTCATAAAGCACACCACAGCCTTCTTGTGCTTAGGAACACTAAGCCAGCAC EMBV3_27567 CAAGATCTATGGGGGACGTCAGAGAAACGGTGTCATGCCCAGCCATTTTAGCAGAGGCTC Gene GeneID:100336640|LOC100336640:XM_002698963:102_cdna Constitutive 0 NULL GeneID:100336640 28 GENE LOC100336640 NULL ribosomal protein S19-like EMBV3_01316 GGACCAGGCGGGTCTCGGGGCTCGCGGAAGTTGAAGACTTGATCAAATACCTGGATCCTG Variant GeneID:514327|DCTN3:NM_001075660:25_cdna 100^184 2 EMBV3_17298 GeneID:514327 8 GENE DCTN3 MGC142778 dynactin 3 (p22) EMBV3_34218 TCTGAATCTCCCAGGCTGTCTGTTCCGAGGGTGGATTGAGATCTTAGGAAAAACCAAGGC Gene GeneID:494318|PLA2G2D1:NM_001009572:60_cdna Constitutive 0 NULL GeneID:494318 2 GENE PLA2G2D1 NULL calcium-dependent phospholipase A2 PLA2G2D1 EMBV3_02785 GCCACTGCCAGCACACCTGCCTTAGTGAAAAACCTTATGGAAAAAGATCCCACTCTGACC Gene GeneID:286864|LIPT1:NM_174795:17_cdna Constitutive 0 NULL GeneID:286864 11 GENE LIPT1 NULL lipoyltransferase 1 EMBV3_39102 ATGAGCCAGATATCACGATTGAACAGCCAACTCCTCTGTCCCAAGAGTGCACGTTTCAGA Gene GeneID:524536|SYDE2:XM_002686286:139_cdna Constitutive 0 NULL GeneID:524536 3 GENE SYDE2 NULL synapse defective 1, Rho GTPase, homolog 2 (C. elegans) EMBV3_05119 ACCAGTTCACTGCCATCTACAACGGCAGCGGAGAGCTGATCAACCATATCAAGTACTACG Gene GeneID:507056|RPTOR:XM_002696120:222_cdna Constitutive 0 NULL GeneID:507056 19 GENE RPTOR NULL regulatory associated protein of MTOR, complex 1 EMBV3_19454 ACTGTAGTCTTCTGTATTCACTAAAAAATAAATGCCTGAGAGTATCAAATTTTGTTTCAT Gene GeneID:519816|AASDHPPT:XM_002692918:32_cdna Constitutive 2 NULL GeneID:519816 15 GENE AASDHPPT NULL aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase EMBV3_15140 TGGCAAAATTACAAACCTTGAGGACTGAACAGTGATTGCCAAGGAGGAGGGGAATGGGGG Gene GeneID:508284|ACBD7:NM_001113297:82_cdna UTR3_Alt 1 NULL GeneID:508284 13 GENE ACBD7 MGC128293 acyl-Coenzyme A binding domain containing 7 EMBV3_11028 GAGTTTCCCACTTGATTACCCGTTAAGTCCCCCAATGACGAGAGCGGCGCCAACGTGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01056 TCCACCACCCTGACTACCTGGCTTAGTGCACCAGCACGAAAATTAAGATGCAGAAAGCAG Gene BVV0102_082218 - 0 NULL GK000024.2:46453530-46596406 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139177 TCONS_00139180 TCONS_00139176 TCONS_00139178 TCONS_00139187 TCONS_00139179 TCONS_00139181 TCONS_00139186 1 XLOC_084824 Coding TCONS_00139176 XLOC_084824 Coding Coding C24H18orf25 24:46368330-46457608 j TSS104140 5917 1 TCONS_00139176_5 286 0.0190975156329221 7 0.933801539030209 3.71607188128478e-07 0.000496513141285861 0.000149849302370367 0.000226387298787711 0.000539445192188682 9.5796742212197e-16 0.000268797314125388 0.000154590923324125 1.53563070878453e-09 0.000121924604530226 1.28879899286107e-08 8.1200560021601e-07 2.23495542683699e-27 1.18292178371614e-21 2.46599108109986e-05 1.14081610685013e-24 4.56290786506752e-29 3.61447813645459e-33 0.000864194418833944 2.84786903207862e-05 1.6713760685356e-45 1.30042227819199e-18 2.6895489351447e-05 1.80607024856551e-09 1.44200194343623e-18 0.000663107622538215 4.8164538233412e-11 1.19852187927335e-05 3.17180761973023e-05 1.2043630602638e-20 NM_001105439.1 C24H18orf25 Bos taurus chromosome 24 open reading frame, human C18orf25 (C24H18orf25), mRNA. 0.0 937 100.00 0.0875443636978198 NM_145055.3 C18orf25 Homo sapiens chromosome 18 open reading frame 25 (C18orf25), 0.0 3067 83.43 0.48419807334798 TCONS_00139176_5 sp|Q96B23|CR025_HUMAN CR025_HUMAN Uncharacterized protein C18orf25; 8e-168 476 96.80 0.870629370629371 1 coding 0 0 0 0 -0.79268469684598 0.131465557441496 -0.0628111774621394 0.440033367301816 CCAAAAACAAATAGATTTTTTTTTTTTAAAGAGAGGTTAACACATACTCATTGAAAAAGTTAAAACTGTCCTTTGCACTTATTTCCACTTTTCAATAGACTTACAGACTTTACATATAGAAGGGGTGTCACCTGATTGGAAAGAGGGACTTAACCATAGAGAGAGGAGCCACCATCACCCACCCCAGAGGCCCAGAGCAGGGCGGTGGTGGTGTGCCTCTGCGTTCACGGCATCCTTTTTCCCTGCTCCATTCTGGTTCCACGTGAAGTTGCTGCTCTGGAAATATGAGTCCCTGGAGATGGCAACACCACCGTACTTGACCCATGTCTCGCGTCCAGCACGTTTCTTCCTCGATCCCAGACCTCAGCGAAGGGCGTCGAAAGCTCAGGGCGCGCTAGTGCAAATCCGGAGTGACTGCAAAGGTGGGATTTGGGGCGTCTTGCATAGCGCGTACGGGGCGGAGTGGAGTTTCTCTGGGGGACTCTTGACTCACCAGCAGGTGGCGGTCTGTCTGCAAGGCGTGCAAGGTTCATCCAGAAAACTTGAACGGAATGTTGATGCCACTGCATCAGAGAGGCACAGCCAAGTCTCCGCGAGTAGAGCCGTGGGCATCCGCGAAAAGGTGGGGAAGAGAACGGAGCGGACTTCCTTGCCGGCGTGACTCAAGGATTCAAACGCCAAGAGCTTCCTTCGGTAACGCTTCAGGAGGGGTTGGTTTCCTGTTACATCTTTGACATAGTTTCCTAGACTGCTCCATGAATTAACTCGAAAATCTGAAATGAAGATGGAGGAGGCAGTGGGAAAAGTTGAAGAACTCATTGAGTCTGAAGTGCCACCAAAAACATCTGAACAAGAGACAGCTAAGGAGGAAGATGGATCTGTGGAAAAGAAAAACCGGCAATCCAGTGATAAACAGAATGGCCGAGTTGCCAAGGTTAAAGGTCATCGGAGCCAAAAGCACAAGGAGAGAATCAGGCTACTGAGGCAGAAACGGGAGGCTGCTGCACGGAAGAAGTATAACCTGTTGCAGGACAGTAGTACCAGTGATAGTGACCTGACTTGTGACTCAAGCACGAGCTCATCAGATGATGATGAAGAGGTTTCAGGGAGCAGCAAGACAATCACTGCAGAGATACCAGATGGACCTCCAGTTGTAGCTCATTATGATATGTCTGACACCGGCTCTGAGCCAGAAGTGGTAAATGTGGACAATTTATTGGCGGCTGCAGTAGTTCAAGAGCACAGTAATTGTGTAGGAGGCCAGGACACAGGAGCTACCTGGAGGACCAGCGGGCTTCTAGAGGAGCTGAATGCGGAGGCAGGTCATTTGGATCCAGGATTCCTAGCAAGTGAGAAAACATCTGCTGGCAATGCACCACTCAATGAAGAAATTAATATTGCCTCTTCAGATAGTGAAGTGGAGATTGTGGGGGTTCAGGAACATGCAAGGTGTGTTCATCCTCGAGGAGGTGTGATTCAGAGTGTTTCTTCATGGAAGCATGGCTCCAGCACACAGTATGTTAGCGCCCGGCAAACACAGTCATGGACTGCTGTGGCTCCTCAGCAGACTTGGGCTTCACCTGCAGAAGTTGTTGACCTCACACTGGATGAGGATAGCAGACGCAAATACCTGCTGTAATACAATGTCACTGTGTTTCCTCTGCACTGTTCCCCTCTACTTCCTCCTCCTCCTCCTCTTTGTGACATGGAAGTTCATTGTCATAGCTTCAGCCTCAGAAGCTGTTTGTGGCATTTGTATAATCAAAAACTCATGGAAAATTGCTCTCCTTCCCCCTCCTTTTTTTTTTTAAATTAAAAGAAGTCACTTAGGAAAATAACTTATCACAGAGAAAAGAATTTCTTTTCTTGTTTCCCTCAGTAGGAATATGAGAATGATGACGTTTATAAGACAACTTCATTTTACTTGGTGACTTTCAGTCTTGGGGAAACTCTGCCCTCCTTTTAGAATGGTATTTTAATTACCAGGTAAAATGGATTTTAGTTTCTGAGTCTTGTATTTATTTTTCTGTGTAATAAAATTAATATGTAGACTTGACCACTGTCAGCCCACCCATTGGCACTCCTATCTTAGGGCATTTGCACACATATTAGTCAGGTCCTTATTGGCACCTAGTAGGGCATGTGCATTGAAAACCTGTCCTTAAAAATAGAAGACAGAAGTTAACTTTTTCTTTTAGCTTAAGTCTTCTGCCTTCTTTCCTAACTTTGCTCCTGGCTGACTTCCCACAACCCAAATAATTAACATGCCCTCTTTGTGTTTATAAATACTGCTAAGGTGACTTAGTTGATCTCCTTGTTGCAATAATTCATAACCCTTTGGAAAATATCTCCTTGTAAGGCAGAGGCATTTCAGATAGATACCCACCATGAGGTTTGAGCATCTGAAGAGAGTATTGAGAGATCCCTTTCCCCCTCCCTGGTTTGTTCAATGGGAGAAACAGAACCTATTACTTAGGTAGACTATGCCTAAGTACATAGCTAGTAATATGAAAATTGTGTGACTTCTAAGGCTATGGGCACTTGTAAATCTGAGAGGACAATGCCTTTTTCCATAGCTAGTCTCTCCAAAAAGGATGCATAACAACTGTTCAATGCTTGAGCTGAAGTTGACCTGATGCTGTATTTGGGTATTTTTCTCCTCTACCTTTTAAAAGTGGAAAGATCAAAATGTATCATAAAAATCAGATACGAAGCACATTAATGGCACTGTAGATTTTGCAGTATCTAACAGGAATTGTAAGGGGTAGTAGGAGCTTCAGGGAATTCAGGAAATGCCAGTGTTGGAGTTCCATGGCATTAGTTACTACCTTGTTTCCTATAACGTAGTTCCTAGTGAATTACTTGACAAGCAATACCTAGAGTTAGAACACTGTATGCTGTGCACAGGGAACAGTGGAGTAATGCTGGCGTAGAAGACCTCACTTTGTGTTTTTCCACAGCTTTTGTGTGCTTTTTCTTTTTGGTTTCCATTTTCACCATACAGTGTGGCTATAGCCCTTTGCCTCCCTTCCCAAATGTCTCGGTGGCTCTTCCTTATCGTGAGAGCATGAGAAGGACCGTGTTCAGCTTCCATTCAGCGGACACGCATTTACCAAGTGCCTGTTCTGCATGAGGCACTGTGTGGGGTGGTGCTGTGGGGCTGCTGTGCTGAGCAAGACCCCCCACATGCACACGAGTCAGAGTCTGCCTGGCTCCACAAGCCCGGCCTTTCCTTCTGTATTTTGTAAAGACTCGTCTGTTCCTTCACCCTTCTTCCTGCTGTTTGAGTTCATCTGTATATCCTTCTATGGGAGTATATTTAAGCATGTCTTCTCTTCTGATAACATCTCATTTGATCTGGCCTCTGTTGTTCATCAACTTTTTATTTTCCTATGTATCTACTTTTAATAGATGAGGCTTTTGAAGAGATCGTAAACCTCCAGTTTTAGCCCCTCATACATGGCCACAATTCTAGGCAAAAACCAAAGACCCAGAGGCCAGAGCAAAATAGGACCTTCTGCAGATTCACTACTGGTATATCCTTGGACCGTCACATTTTACTTTAGGATTAATTTATTGAATTTTACTGTTACACATTGTTTTTGACTTGAATTAAAATGCTAGACAAAGCAGAAATGTACAATTTCTGGTCTGTATTTTCCAGGAATATCATTGGGGAAAGGATAGAGTTATATGACTTGAAGTTTTTGCAGCTTATTTTTCTCCCAGTATCAGGGCAGAGCCCCATTTTATTTCATTTTTAATTTAATTTTTTGCTACACCTGGTGGCTTGTGGGATCTTAATTCCCCAACCAGGGATCAAACCCACGCCCTCAGCAGTGAAAGCGCAGAGTCCTAACCACTGGACTGCCAGGGAATTCCCCAGAGCCCCATTTTAAAGAACTTTTTTGCATTACCTGTTCTTATGTTAGCAGTATGTTTTGTTCACTTCCATATAGCAGGTGATTTCCCAGGGCATATTTTCTTTAGTCCCTCACGGTCATCCTTTAATGAGAATTCTTTCAGTGTGTTGTAGGCACTCTGGGTTGGGAACAGAGAGTGAAGTTTTAACCAAGCTCTTTTATGGCTTTTTGCTTTTGTATTGGGTTAAAGTTTGCCCTTACCTGTCCCTTTTCCACCACCCTGACTACCTGGCTTAGTGCACCAGCACGAAAATTAAGATGCAGAAAGCAGGGAGGGGAAGGGATGGTGGAAATAGTAGCTTTTCTCCCTACTAGTTTGGGACTTTTCCACCTTCTAACTAACTATAGAGAGACTGTGTTTCACCTCTTCTTTGGTTGCCAGGTCCAGGAGAGTAGGGATATGGTTTCTGGCAAGCTATTAATGATAAAATTCTGTGGTAAATATTCTGACATTTTAAATTTCTTTAAAGGGGATCTTTTCTAACCAGTTTTGCACTTGGTAGCATAAACACTTTATACTTCACAGTCTCTTCAAAGTAATATCTCTGCTAAAATGGTACACTTTGGTCACAGATTGGTTTATGGCACCAACATGGCTAAGTGCCCCCCTTCCCTCAGTTTGAAACCACAGAGTGGTAACTTCGCTACTGCATATTGCCCTGCGAGATGTAGTTGCTGCTTGCTTCATTTTGATGGAAGGGGCCAAACTGAATGGACTCCATTATTCATAGCAACTGAACATCCCATAAACTCGGCTTTCATTTTACCAGTTGTGAATATGAACATCTAATTTGCTAATTTAGTCAGTCGTTCATTGTTACTTTTAGCAAATTAGCACCATAGGTAATTTAAAAACAAATTTGTTGCCTGCTTTTTATATATACTGTGTCATAAGGTTCTTGAAAAAGCTGGGGGCACAATTTTGTCTTTTAAAGTTTTTTTTTTTTTTCAAGGCAAAGAGCTCCCCCCAACCCGTTTCTCAGTATGTGTATGATGCGACTTCCATGTATATATAAAAATGACTGCGCCCTAACCAAACTTCCTCAGATTGTGCACTGTTTGTTTAAAATAATCACGTATTTTAGTCCAATGCTGTTGTATTTTTCATTTTATTTAAAACACTACGTACTTCTTATTCTTTTAACAAGTTTTAAAGGATAGTGATCTTAAAAAAAAAATCACTGGATAACTAGGAAATAACTTTTTGTTGTTGTTTTGTTTTTTAAAGAGTACAAAGGTCTTTAAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTGTATGGCTAGGAACCAATGCACTTGGTGGTTAACAGATCTGCTGTTGCTGGAGCGTGGACTTGATGCAGTGACGACAAATCATTGCTTAGAATTAATGTTTTAAAATGTGCAACTCTAGTTTTTAAAATAGACTTTGGTTCTTCTTTACGTTCATTATTTAGTTTTTGTTTTCATTTAGTATTTAATGGTCTTTGGAGAAAAAAAATAAAACAGAGTGTTATATATATATTTTTTGGTGCAAGATAAGATTTTCTGTTTTTTGAAATAAGTCTGTAGCATAAAGGTTAAACTATTTTAAGACAAAATAAAATAGAGTGTATTTAAACAAAGATAATTTCTGAGGATTTTTTTTTTCCTGTCTGCTTCAGTTAATTAGATGGTGCCTGGAGCAGCTCCCAAGTTAGCTTTTGGATGTGAGAGTGAATTATATTTTGTTATCAGATCTTATTGTTTAAGTTGCCTGATTTTTTTCCAAGCAACAGCTGTATCCTACTCCTAGAATGTTTTGCAATTGGCCTTTGGTGTATTAGATCTAGATAAAAATAGTTTTGTACTGGCTTTCCTGTAGCCCCCACTTCCCGTTCCAGTTTGAACCCATGAGATTTCAAAGTCAACTAAAGGCTCCCTAGTGCTTGACCCCTTTGCTCCTGGGAACAAAAGTCAGCTGACAGTTACTTCCCAGAGTTCAACGTGCCAGGGTAAAAT EMBV3_38333 GTGCCTCCTATTGGTGCTTCAGCTCTGACCTCGGGGAAGAGCAGGTCTTAGGGTCATCAA Gene GeneID:781568|TRAF4:NM_001101280:169_cdna Constitutive 1 NULL GeneID:781568 19 GENE TRAF4 NULL TNF receptor-associated factor 4 EMBV3_38313 CACCACAGAGCTCACATGATCTTCTGTGTGCACAGCTACTCAGTCATGTCTGACTCTTTG Gene BVV0102_318668 + 1 EMBV3_30352 GK000020.2:42415420-42936164 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00372 GTGAGTTTTGACAAATCAGTAGTGTCTGTAAAGGTCTCCGGATGAGCTAGAACTGGCCCC Gene BVT0102_143933 - 1 EMBV3_21369 GK000012.2:34638186-34673860 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22865 TGTTTTATTCCAGTTGGTGATGCTGCCCCACAGGATTCTCCGTCATGAAGCATCTGCGTC Gene GeneID:505791|TROAP:NM_001024477:35_cdna Constitutive 0 NULL GeneID:505791 5 GENE TROAP MGC143190 trophinin associated protein (tastin) EMBV3_32216 ATCGGCAGTGGGAGCGGCGGCCAGACTCTCCTGGGACCTTCAGATATTTCACTTCTGAAT Gene BVV0102_456457 + 1 EMBV3_09426 GK000017.2:54581332-54584644 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00075455 1 XLOC_046591 NonCoding TCONS_00075455 XLOC_046591 NonCoding NonCoding - 17:54581645-54593178 - TSS56895 544 1 TCONS_00075455_1 113 4 0.953173777315297 0.0103125468671047 0.0127021402783487 0.0109542644921779 0.0051666054847271 0.00793981737905608 0.00353986703678205 0.00591581571470324 0.00830873336194221 0.0134938981430678 0.000771400934770378 8.61676650375303e-07 0.00106232600274123 0.00126321555062646 0.00136190495568238 0.00189843859728496 0.00320431643053172 5.13282404122199e-06 0.00276735919851982 0.00694038091443325 0.00978965046554694 0.00162110357437043 0.00165052241312642 0.000489015995242873 0.0034360517523906 0.0113160541863436 0.011500665488063 0.00693434979997773 4.40384956001899e-06 0.00066034667646336 0.000925779811873235 XM_005217865.1 MPHOSPH9 PREDICTED: Bos taurus M-phase phosphoprotein 9 (MPHOSPH9), 0.0 982 100.00 0.998161764705882 NM_022782.3 MPHOSPH9 Homo sapiens M-phase phosphoprotein 9 (MPHOSPH9), transcript 0.0 728 89.74 0.998161764705882 0 noncoding 0 0 0 0 0.0766815458323286 0.540576554441063 0.0251409032936949 0.664097600148209 GAGAGGCCGAGCGCCCGACCCTGACATCGGCAGTGGGAGCGGCGGCCAGACTCTCCTGGGACCTTCAGATATTTCACTTCTGAATGTCAGCAACTGAAAATGCCTGTAGACGATGAAGCATCTGAAGATGACTCAGATTCAGTTTCTTCAAACAGTGCAAGAACCTGAATTTTCAAATGAGAGCGTGTAACAATTTCTGTACACTATGGAAGATTTTGACTTGGGGAAGCCCTCACAGAAAGCTTCATCTTCTATAGAATCTGATATAAAAAATTCTCCTCATTCTCTTGGACTGAACTTAAATACTAATAGAAGTAGTCCCCACCTTAGTACAAATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTCCTCACCTCTTTAATGCAAGAGCTACAAAACAGTGGAAAGACTGATTCGGAACTTTGGAAAAACTGTGAGACCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACAGTGCCAAGAGCAGATAGTGGCTCAGCAGGAGCAATTTCAC TCONS_00077325 r 5' 192 TCONS_00077325 r 5' 192 EMBV3_36824 GTAAGACTATCTTGAGAAAACCAGAATTCATAATAGTTGTGTTCTTCTGGGTTTTCCAGG Gene BVT0102_034878 + 0 NULL GK000028.2:39620695-39785331 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159700 TCONS_00159704 TCONS_00159698 TCONS_00159699 TCONS_00159701 TCONS_00159697 1 XLOC_097481 Coding TCONS_00159701 XLOC_097481 Coding Coding FAM190B 28:39586584-39745918 j TSS119613 5925 1 TCONS_00159701_4 662 11 0.962882767537171 0.00120440658622837 0.000430964861333635 0.000239860305316911 0.000190485054652543 0.000673955983136558 0.000334338896108859 5.40057488696885e-25 0.000261062027422353 2.07839746769462e-07 0.000136149853264565 1.4038513139884e-05 1.69495941863538e-27 9.79130725802644e-05 0.000286578121819425 0.000260702630325376 1.01602679658777e-14 1.49967119816412e-14 0.000187739460130382 0.000251107257014927 1.4366947160008e-13 0.00042930731493133 7.07741092370202e-05 6.83517598381903e-05 2.77037291446432e-13 0.000366248696653093 0.00118497017085191 0.000242207986233106 3.23649051311201e-35 1.51650753235314e-08 1.27490769454809e-11 XM_005197254.1 FAM190B PREDICTED: Bos taurus family with sequence similarity 190, member B (FAM190B), transcript variant X3, mRNA. 0.0 6347 100.00 0.593755274261603 NM_001284240.1 CCSER2 Homo sapiens coiled-coil serine-rich protein 2 (CCSER2), transcript 0.0 2747 91.03 0.331139240506329 TCONS_00159701_4 sp|Q9H7U1|CCSE2_HUMAN CCSE2_HUMAN Serine-rich coiled-coil domain-containing protein 2; 0.0 681 91.53 0.569486404833837 0 coding 1 1 1 0 0.185546632058783 0.59398270073625 -0.00882952645477074 0.864716088613503 GGTGGCTTTGGAGTCCTGGGCTCCCTCAGGCCGTGGACGCAATGGTGGCTGCTGCGGGGCAGGCGGCGGGACCGGCTTGGATGTGATGGGCGGCCCCTCGCTTCACCTACCGTCCTTGGGCCTGTAGGTCGCTGTGCGACCCATAGCCGGGCCGCGGCTGAGGAGGCAGCGCGACCTCCGCACGATTCTGTCAAATTTTAAGAACAAATGCACCGTATAGCTCATGGAAGAGAAAACACAAATCAAGACTTTTTTGGGTTCCAAGTTGCCAAAAATGATTTAAGTGAAGACTTCAGTGATGATTTTATAGATATAGAAGACTCCAACAGAACTAGAATAACTCCAGAGGAAATTTCTCTCAAAGAAGAAAAGTATGAAAATGTACCACCAAAAGATATATTTGATTCCCCCAAGGAAAATGAAAAATCCTTCAGTAAAACTGATGAATGGATAGATATAAGTGTCTCTGACAGGAGTGAATGTTCAAAACATGCTTCTGGAAATAACTTGATTTCACCAGACACAGATTACAGAGCTGGTTCTTCATTTGAACTCTCTCCATCTGATAGCTCTGATGGAACGTACATGTGGGATGAAGAGGGCTTGGAGCCCATTGGAAATGTCCACCCAGTTGGGAGCTATGAGTCCTCCGAAATGAACAGCATAGATATTCTGAATAATCTTGAATCATGTGACCTTGAGGATGATGACCTTATGCTTGATGTGGATCTGCCTGAGGATACACCTCTTGAAAATGTGGAGTGTGACAATATGAACCGCTTTGACCGATCAGACAGAAATGTTCGACAGTCTCAAGAAGGATTTTGGAAAAGGCCACCCCAGAGGTGGAGTGGACAGGAACATTACCACCTTAGCCATCCTGACCACTATCATCACCATGGAAAAAGTGACTTGAGCAGAGGCTCTCCCTATAGAGAATCTCCTTTGGGTCATTTTGAAAGCTATGGAGGGACCCCCTTTTTCCAGGCTCAGAAGATGTTTGTAGATGTACCAGAAAATACGGTGATACTGGACGAGATGACCCTTCGGCATATGGTTCAGGATTGCACTGCTGTGAAAACTCAGTTACTCAGGCTGAAGCGGCTGCTGCGCCAGCATGATGGAAGTGGTTCATTGCATGATGTTCAACTCTCATTGCCATCTAGTCCAGAACCAGAAGATGGTGATCAAATATGCAAGAATGAAGATTTACTAAATGAAATAAAACAACTTAAAGAGGAACTAAAGAAAAAAGATGAAAAAATCCAACTATTAGAACATCAGCTTGCAACTCGGTGTAACTGCCATCAAAAATCTAAAGAGGAAAAATGTACATATGCTGATAAATATACCCAAACACCCTGGAGAAGAATTCCTCCTCAAGTACTACAGCCTTCCAGCAGCCTTCCCAGACCCACAGACCACACCCAGGGAAAACTAGTAAAGCCACAACATACCGAGGCCCACAGTGAGTGCACAGTCCAGGGCACACATCAGGGTGTTGTACCTCCAGATGAAAGCTTTACACACGGCTCGCAACAAGAAAGCAGCAATGGTCTGGAAGACCAGCCTTTTTCTTCAAGCCCGGAATTCACTAAGGATGTGGTGAAGAGTATGCCTTCTGAAGCAAACTTGAACACGACCTTGAATGCTCAAGAGCCATATCATCTGGCAAATAATCAAATCGGTGACATGCAGTTTGTGCCCACTTCTCTTCAGACACTTCCCCAGTCAAGTACAGATGACCAGGCTAAGAGAGTTGGAAGAAATCAGTCTTCTCCAGAGGGCTACACATCTCAGCCCACGTCCTCGCAGCTTTTTAAGCCACCCATCTTGAATTCTTTGGTATCTCCTTCAGTTCCTGAAACATCTCCAAATAGGACTCCCACTTATAAGAAGTCACCAATAATCACACAATGTAATTCCGCAAAACTCCAGCCAACATCTAGTCAAACAAATCTTGCAAGTAATCCAAATCCAAAAGTGTCTAAGCTCCGCCCCCCTTCTGGCTCTTTCAAACAAAAACACATAAGCAGCCCCCGACTAGAGCCTCAAAACTTCCAGGCCAAGACAAGCATCCCAAGGCCACTAATAAGAAGAAAAGAAATCATGCAGACTCCTAATGACAATTTGAATTCTGGGGATTGTTTGGCTTCTAATCAATACTCTCGTCTTCCTAAACCAAAGATACATTAAGTGCATAGCCATCACCTGCCAATTTGTTTTTTAAAAANNNNNNNNNNNNNNNNNTTATTTTAACTGAAGATTTGGTGATAATGAAAGATGATAGTCTGTAAGCAGAGTTCTGGCCAGTGATTTGTATATTTTAAAGGTCTATGCAAAAGCTCTGTGATGAATAAAGGAGAATGAATTCAGGCTTTTAATGGGAAGTTAATATAAGTTTTATTTTTCCTTGTTATAGTCTCAGTATTTATTTATTTACCAGACAAATTCCCCTGGCTAAAATTCTTCATATTATATATATATATAAACCAATTATATGTTGCTTTAACATCTTGTTAAACACACACACCCAGATTCACACATAATTTGTATTTGTTTTTGTTACTGGTTAAATTTTGGAAGGCTTGAGTGAAGATACACCTGAAACCTGACCTAAAGATATATTCATTTGTAACATATGTTGGTGCTAGAGTTTTGCTGGTAATTCCGTTTTAAATCCTATAGGCTTATGAATCCATGCTAGCTGTTTTGAGGTTCCACAGTATATATTTTAAATTAAGTCTTTATTGTAATATTTATATTTATTGACTTTCTGCTAATATCCGAAGACTGGAATAATGGACTTGAAATGTTTGCACAGAACTTTGATGGGATATAAATGTCTCATACGTGGGGATTTAAAACTATTTTCTATAGCAAAATGAGTTAAAATATTTTGAGTATAATTATAAATTTAAGTAAGACTATCTTGAGAAAACCAGAATTCATAATAGTTGTGTTCTTCTGGGTTTTCCAGGTTTTCCTTTTATGTTGGTGTGTATTTGAAAAGTAGATTTGGGAAGAAAAATAAAATTGGAAAGGGGAAATTGTGTTTTATTAAAATGTATTAAAAGATATTTCAATGGCAATATGCTTATTTATTTTAATGTGCTAGGAAGGCAGCTGTGGAACTGCCAAGGGACCATACGCGTTAACCTAATCATGCTGCTGACCGCTCGTCAGGTGGTTCAGTCAGTGTGCCCTCCTGTTCTCCCAAATCATGGTGTCTCTAGGCTGTTCATCTGCTGTTGCTTTCGTTAGGATTAATGTCTTTCAGACAGACAATATTTACTAAGTCAATTTTTGTTGTGATCAGTTGACCAAAAATTTATCAAAAGGGATCATGGCCAAAAAGTCAGTCACTCAAATTTCTAGTGGTCCCTTTACAAAATGTACATTGCCCCATTTTAGAGAAACAGCACAGCAAGGGCTCTAGTGGAAATCTGAAAAGAGGTGTTTCCTGCCATGTGACACAGTCACCCCTTCCTGCCAGGGGACCATTCTAGTGGGTCTGCCACTTCACCAGATAGCGGCCCTTCTTGGACTTGGTGATAGGTGAGCAGCCCAAGTCTCGAATCAGGCTCTCATCCGACAGCACTCTGCCAGAGAAGCACTAGAGTTTAGAAAGTGTTCACATAATGCAGGTATTGTTACTATGCTAAGTGATGAGGTGTATCAGGAAGGCTCTTTTTTTACAGGCAGTCATAGCTGAAGCTGTAAGTGGGTACGTGTGGTCTTTCATTTTGAGGAGGAAAGAAAACTGTTCTCAGTGCAAATGAGGTGTTTCCCTAAAGTAGAACATACTGATTAATAGGTTTTGGTTTATTTGGACATTGAACCAAACTCTCAAGAAATGTTACCTTTATCTTTAGGGAAAAAATTTTTAGATACTTACTTTAACCCCCTCGTCTGAGGGCAATGTCTGTGTATTAAAATGTTGACTCCTGCAGTATGTTTATTAGAATCCTTTTCCTGGTCTGTTTTTTATTCCTGATGAAATTGCAGAAATATTAATCCATCAGTTCAATTTCTGTGTACCTTTGTTGAGCCTTAATCTTGGCAAAAGGCTCATCAATATAATTATGAAGCATACTATTATATATAAGAGAAAAAAAATCTATGATGCTTGCGAGAAATAACAGAGTATTTGCCTGCAGTTTTCTTTAAAAACTGCAAGAATATTATGCTAGTCTGTCTGCTCCTTAGTAAATGTTAAGTCAGAAATGAGGTGGGGCAGCAGCTCACCTGAGTAATCAGAAATCACTGTTTCAGATTTGGCTTGATCTCTGTAGTGCTTCTGTCAGTCAACTCTGTGCCAAATCCCTTTCCATAGGAACTCAGATCACTTTTTTCCTTGGTTCTTGTGATTTTGGTGAAGATGGTTGCAGTGTATGAATTTTTAATCCTGAGGAAGAAGTTTTTATTGGTGTTAATCACATTTGTGAAAGAGAAAATAGAGTATGTGGAATTATATATTTGGCTGTTAATGGGATGCATATCAAATTCCTTAAAGACAGCTTGGCCTAAGGAGTTAATCAGTACAGATGCAGATGATTTTGAAGGCGCTTAAAGAATTATGTAGTTAATATCATTTAGAATGTTTCTGATAACTGAGACCCTCTAGCTTTTTTCTTTAGGAGTCTCATTTTAATTTGTGCAATATTTTCAGGCATACAACTACTGTTCATTGTATTTATATAGATATTAGAGAACCTTACTAAGTATTTTAACAAGTAAAAATCTGAATATGAGAGAAACTATCAGATTTGCACTTTAAATGAGCTTAATTGCTTGGAGTTGTGCCTGAAATATCGAAATGCCTCCTATTGGGTGTGGCTTCCTTTGTTGAAATGAATTTCTCTATAATTGTTGCTGTTCGAAGTACAGCCTTTCACAGTTGTATTCTAAGCATGTCACTTTTTCCATTAAAGCACTAAGTTCTTTGAATGTCTCATTGTCCCATAAGTATCTTACTCAGACCCATCAAAGAGAACACAGTCCCCCTATAGCTGTCACTTCTAGATCTTCCTGTAGCATAGACGGTACAACAGACACAGACGCACTCTGCATTTCTGAGTGGAATCGTCACGATGGTTTCCTGGTCTCTGGGGCACTGAGGACGTGATTTGGAATCACCAGACACGCTTGCAGTGGAGAGCAGTGAGACTGCAGCACAGTTTCGGTTTACTCTCAACCTTAAGTTTCGTGCTTTTGAATCAGTTGGGGTGGTTATGTTTGCATGCTTATCCATACATTTGAACATTAATTATAGCTGTAGTACAAATACCTGGCGTTTTTCCTTGGGGATGATGGCCTTGCTATTTTTCTTAAGTCTGATGCCTGAATTATATTTTAAAATTTTCTTTTCACACCTCCCTTCGATTTTTCTGCTGCAGCAATTTGAAAGAGTGTGTTTGGATACATGATTATGATGGTGAGCACCAATCTACAACTATGCTGTTAAGTAAAGATACATTGTATGTTTTAACCCTATTGGGGGAAAGCTACCCACTTTCTCCTTGGTAAAGCATCACCACAACAAAGTAAAACTGACCCTAAGAATTTAAAATCTCTTAATCATTGCTGACTAAAAACACCACAATCTTTACTATCTGCAGTATTGTTTTTCCCATTGACTTAAAAACCAGTTCAGAGTAAATACTGTATATTAGAATTTGCTTGTAAAATGAATTATAAAAACTGGATGTAAAGTCTCTTTCCTGAAAATGTTGGCATAGTAAATAAAATAAAATTCATAATTATAAACATTTCCTTGTCTTTCTCAACATTGATATCCACAATGTACTTTTTCTTATACCTTTTTTCCCACAAAAATCTAAAATGTTCGTTTGGTTGATTTTTTTTTTTCAAACTCTGTATTATTTCACACATGCCCTGTGTGATGACATATACATCACACTC EMBV3_22489 CCCCCATCCACCAGACCAACTCAGCATCTGGACCAGCTGGGGGCCTCCATGGGCGCCTGA Variant GeneID:532719|GDPD5:NM_001101141:25_cdna 502^590 3 EMBV3_02319 GeneID:532719 15 GENE GDPD5 NULL glycerophosphodiester phosphodiesterase domain containing 5 EMBV3_17490 GATTCTGCATCAGCACTGTATATATGGTCTTAAGTGCCTGGCCTCCTTATCCTTCAGAAT Gene GeneID:538590|LOC538590:XR_084671:182_cdna Constitutive 0 NULL GeneID:538590 2 PSEUDO LOC538590 NULL similar to collagen, type V, alpha 2 EMBV3_39907 GAGACTGCTCATCCATCAGACTCACTCTTTGTAATCATGAGGCTCTGGGGCTAGGCCTGC Gene GeneID:783068|MGC151567:NM_001080347:420_cdna Constitutive 0 NULL GeneID:783068 28 GENE MGC151567 NULL hypothetical protein LOC783068 EMBV3_08912 GCCGTGGCTCTTCTCCCAAGGTACATTTTCCTGACTCTACAAGGGACATACGGGAAGTCT Gene GeneID:100336948|LOC100336948:XM_002689352:2_cdna Constitutive 0 NULL GeneID:100336948 7 GENE LOC100336948 NULL ATPase, class V, type 10A-like EMBV3_24165 TCAGCTCTGGGGAGACCTGGGAATCGGTTTCTAACTTGTGTCTTAGAAGAGCCCTGGAGA Gene GeneID:513057|PLCD3:XM_002696048:345_cdna Constitutive 0 NULL GeneID:513057 19 GENE PLCD3 NULL phospholipase C, delta 3 EMBV3_07136 TGGGCTTCCCAATGATTCCTGATAGGAGGACCCAGCATATGGCAGCGGCTTCAGTTGTAT Gene GeneID:529231|THOC3:NM_001046300:21_cdna Constitutive 0 NULL GeneID:529231 10 GENE THOC3 MGC137361 THO complex 3 EMBV3_24255 TTTAATGTTGGCATCATTCCTTCCCCTTTTCCTGTTTTGGAGGCTGTCAAGTGGACCTTC Gene BVV0102_137922 + 1 EMBV3_24873 GK000024.2:32915398-32921537 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140027 TCONS_00140022 TCONS_00140028 TCONS_00140021 TCONS_00140024 TCONS_00140025 TCONS_00140026 TCONS_00140023 1 XLOC_085045 Coding TCONS_00140027 XLOC_085045 Coding Coding TTC39C 24:32919040-33025398 j TSS104616 4656 2 TCONS_00140027_1 258 12 0.956335737187021 0.000697379827825853 5.49776035927126e-05 3.61466152718727e-05 4.34587625535384e-05 0.000162621304875773 3.96530312804927e-05 0.000157355711115208 0.000129207800556022 0.000471435920586941 5.10587051262005e-05 1.54574955842579e-06 4.6065648558698e-05 4.38095287416316e-05 1.92571746696371e-16 1.51333551025845e-13 3.59991027698159e-07 6.29221234075192e-18 1.56773798704853e-11 0.000148215418522843 0.000118014176856327 0.000118018951865743 1.89253132270108e-07 0.000479720449128825 9.55279335474562e-05 0.0001072667112533 0.000116258218501292 0.000240662143725631 4.5113999993009e-05 7.7979742741211e-13 7.82508024679079e-16 XM_003583968.2 TTC39C PREDICTED: Bos taurus tetratricopeptide repeat domain 39C (TTC39C), 0.0 2336 97.72 0.286082474226804 NM_001135993.1 TTC39C Homo sapiens tetratricopeptide repeat domain 39C (TTC39C), 0.0 1889 86.05 0.330541237113402 TCONS_00140027_1 sp|Q8N584|TT39C_HUMAN TT39C_HUMAN Tetratricopeptide repeat protein 39C; 3e-178 508 95.82 0.996124031007752 3 coding 0 0 0 0 -0.0311417570947117 0.861680063382537 0.0150830110787378 0.777013367503905 GGGGCGCGGTGTGAGGGCCGGGGCCCGGGTGGCGCGCGGGGGCTGCAGGAAGCGAGGGCAGCCGGGGCTCGGCCCCCGCTCCGCCCGGATAGAAGACACCCGGAAACGGATTCACCGCTTCGGTGGCCGCGCGAGCCGGGAGTCTCGGAGGGGGAGCGGGCGGGCGGGCGGCTGCTGAGTAATCCCCGCGGCGGCGGCGGCGGGAGGCGGCGGCCTGGGCGCCCACGTCCCCGCCGCGCGCGCTGCAGCCCGGCCCCGGCTCCTCCCTCCGCGCCCGCCCACCGCGCCCGCGCCCCGCGCAGGTAGAGCCGGGCTCCGGGCGCGCGCGGGGGCCGCAGCGGCTGCCACCCCACCTCACCTCGGCCCCGAGCAGAGCCTCGCGCGCCCATGGCCGGCTCGGAGCAGCAGCGGCCGCGGCGGCTGGACGACGGAGACGCGGCGGCGGCGCCCCTGCAGGACGCTGAGCTGGCCCTTGCCGGCATCAACATGCTGCTCAACAACGGCTTTCGGGAGTCGGACCAGCTCTTCAAACAATACAGAAATCATAGCCCGTTAATGAGTTTTGGAGCCAGCTTTGTCAGTTTTTTGAATGCCATGATGACATTTGAGGAAGAAAAAATGCAGTTGGCGTGTGATGACTTAAAAACTACAGAAAAGCTGTGTGAAAGTGAAGAGGCTGGAGTAATTGAAACAATCAAGAATAAAATTAAGAAGAATGTTGATGTCCGAAAATCTACCCCCTCTATGGTTGATCGGCTTCAGAGGCAGATAATCATAGCTGACTGTCAAGTTTACCTGGCTGTGCTCTCGTTTGTAAAGCAAGAGTTGTCAGCATATATAAAAGGTGGGTGGATCCTTAGGAAAGCCTGGAAGATTTACAATAAATGCTATCTGGACATCAACGCCCTTCAGGAGCTGTATCAGAAGAAGCTAAGAGAGGAACGTTTGACTTCTGACGCTGCAAATGATAACCACATTGTGGCTGAAGGGGTGTCTGAGGAGTCTCTGAACAGACTGAAAGGTGCTGTGAGCTTTGGATACGGCCTTTTTCACCTTTGCATATCCATGGTGCCCCCAAACCTGCTCAAAATCATCAACCTGCTGGGTTTTCCTGGAGACCGCCTGCAGGGGCTTTCTTCACTGATGTATGCAAGCGAAAATTAGCGCTGCTCTGGTATCATACCGTGGTCCGCCCATTTTTTGCCTTGGATGGAAGTGATAACAAAGCCGGCCTGGATGAAGCGAAGGAAATTCTCCTCAAAAAAGAAGCTGCTTATCCAAACTCTTCCCTCTTTATGTTTTTCAAGGGACGCATACAACGACTAGAGTGTCAAATCAACAGTGCCTTGACTTCCTTCCATACTGCTCTGGAACTTGCAGTAGACCAGAGAGAAATCCAGCATGTTTGTCTCTATGAAATTGGTTGGTGCAGCATGATAGAGCTGAATTTCAAGGATGCGTTCAATTCCTTTGAGAGGCTAAAAAACGAGTCCCGGTGGTCCCAGTGCTATTATGCCTACCTAACCGCAGCTTGCCATGGAGTAGATGATTCATCTGTCGTTGGATTAAAGTATTTGCTTCTTGGTGCCATACACAAATGTCTAGGGAACTCAGAAGATGCTGTTCAGTTCTTTCAGCGAGCTGTCAAAGATGAGTTATGTCGGCAGAATAACTTATACGTTCAGCCATATGCTTGCTATGAACTTGGCTGTCTTCTATTAGACAAACCAGAGACTGTAGGAAGAGGCAGAACTCTCCTCCTTCAAGCAAAGGAGGATTTCTCTGGCTACGACTTTGAAAACAGGTTGCATGTCCGCATTCATGCTGCTCTGGCCTCAATGAGGGAACTGGTCCCTCAGTGACAGACCCCAAGTTCCTGCTGTGTCCTTCCCCAACACAGGTTCTGCACTTTAAAAGCAGAGCACACCGCTCTTATGAAGATCAGCTTTTCTTCGAAAACCACCTGGACCCAGGACACGTTTCCTCAGTTAGGCTGATGTATTCAAGATCTCCTCTTTTAAACACATAGCTTAAAAAAGAAAAGTGATGATGATGGTAGTGATAATAACTAACCACCTGGGGAGAGGGTTAAGTGACCTTGTTCAAACATTTTAGTTTTGTGATTTATTATTTTTAAAATAAAAGTAAACTAAATATTCAACCTGCGATCTTGTAGGAATGCATACCTGAAGCACACATCTGACTGGGTAACACAAAGTACCTGTAAAATTATTAACAGTATCACAACATAGTATTTATATTGTGTTTTGAAAAAATAGCAGTGCTTTCCAGTTTTACTTTATCCTCAAACTATTCCTGTGAATAATAGCACAGATATTCTAATCTCCATTGTCCAGAAAATGAGACTCAGGCACAAGAAAGCGAATTGACTTATTCCAATTAATTATTCCTCTTATTATAGAGTCTTGAATAGAATGCAGGTCTCCTGACCACAGACCAAATAATTCTTTTATTGTAAAAACAAATATGTTAATAACCCAGAATTCCAAGTTTTCCTTATTAAAAAAAAAATACTTCTCAGCTGAAGTTGTGTCATCAAAATATTTATCTCCAGATTGTCTACAAAAATGTTTCAAAGGACAAACACTTTTTTCCCTTTGAAAGCCAGCAACATGAAAGCAAATAGAAGATAGTTTTACAGCCCAAAGTATAGCTGTTTTGCTAATGTATTAGAAGACCTAGACTACAGACAGGATTAATAACACCTACATTATAGGTGTTTCCCTTCCTTTGTAATTAATTGTCTAGTTTCCAAGTTTTGGAACTTTTTCAGCAAATTGCATGAAAAGGCTGTTCTTGAAAGCACACAGATTTTTTTGCCTCAAAGTATTTGCTGGTGAGGGATTTGCTGGGCTGTCTGTTGCCAGGATTTAATCATTTTCCCCTTAGCTCAGGTTATTGATATTGTAAATAGACTTCAAAGTTATTTTTTAATCCTTTGTTGCTAATTTTTATTGTCATTGAATTTACCTCTTTGTTCAGTACTGCATACCTGTATTTTCAAAGAATCTAAATACCTCAGTCATTTTAAAATTTATTTCATCATTGTGTGGCTAACCTGGATCAATCTTAAGGGTAGTTATTTTTAAAATTTTCAGTGCCCTATAGAATATCCTCTTGGAGTGTCATTTAATTTACATATCGTTTTAGCTGAAGTATGATCTCATAGAACATCAGCAGTTTTAATATTTCACTTCAAAACAAACATGGGAGGGGCAGCTACAGCTTTGGCAGCTTCAATCTACTTAATCAGGTTTTGAGGGAATAATAGTTTCTTTTAAAAAAATGCTTGCTCTTCACTGACTTTGGCTGAACTTGCTTCATGTTTTTTCACTTACAAAGTGCTTATTAACGTTGACTTTCTTTCTAGTGGGACTGCTGCATGGGTTTTAGATGCTAGCCAGAGAGAAAAGATGCTACGTACTTTCATGAACGGGAAGATCCAGGAGCCAGGTAGATGCCTTCTGAAGGGGAAAATTGGTGTCTAAAAGTTTTAGATACCTGGTTTGAAGGAAAGAATGTTATGAATCTTTAAAATATGGCTCTCGCCATTTTCATGTCCTTTTGGTTATAGTTTATATGGCAAATTTCTCACTTATGATTGTGGAGCGTTCGGAATCATGAAGTTCTTGCTCCAGTATTCATACTTATTTGAATTTTCAGATCAGGTATTGTTCAAGCTACTTACTATTCAGTAGTAAAAGATTACATAAGGCTCCATACTTTTCTGCTTTAACTGCTTTAAAACTTTTTGTTTTTCCAGAGAGATCTCAGGATTTCAAATAAATCTGTGTTCAGTTCACTTCACTGAATACACATGATTGCAACACTGCTCAGTGAGTCGTCTCTACTAGTCCGTTTATAGATCTGTTTATAAACTGTCTCTGCTGGGTTTGATGCAGGATAGCCCTGGTGGTTTATCTGGAACCTGGTGGTAGAGCTCTGAGAGGGGGTAGACAGTGGTTCTAAAAATACTAAAATAACAAAACTGTGCTGAGTACACAAAGCCATTAGATTCACTGAAATCTGAGTACAGTATTGAGTGGAGTAATTTATAACAGTCTGGCCTGCGTGCCATGACTTACCCAACCTTTGAGTTACTGTTACCTGCCTGGAAACCTAGTTTGGTGTAAATTGCTCTTTACCCCTCTCTGATGAAGAAAATAATCAATAATCATGTTTGCATCTGTGTGTGCTTTTTTAATGTTGGCATCATTCCTTCCCCTTTTCCTGTTTTGGAGGCTGTCAAGTGGACCTTCTAATTTATAAGTGTCAGATATATTTTTGTATTAGATTGTGCCTATGATGAGAGAAATCTCTAATGTATATTTTCTGTACTTGGAACACAATTATAATCTGACACACTTGGAGGCATGGTCTAGTAATAATAATATGTACCTCTGTGATTAATGTATTTAAGATTTTACTTTTATTGGGATAGGTATCTTTTTGATTTTAGCACATGATAGCTAAGTAAAGAATTATTACTTTCAGATGTCACAGAAAATTAGAATATTTATTGTCCCATATTGTGTAAGTCAATTATTTAGAGAATTTGCATTTTTATCTTTCTGCCAACTAAAATTGAAAGACAGCGTATACATGGTTTTTTAAAACACACACACACACACACAC EMBV3_08556 TCCCCTCTGCCAGTGATCCCGCACCAGAAGGAGCCTTCCTATCAAAGACCTCACCGTGGA Variant GeneID:536781|LDB3:NM_001035416:14_cdna 405^772 1 EMBV3_15567 GeneID:536781 28 GENE LDB3 MGC128608 LIM domain binding 3 EMBV3_25912 AGGGATCGTCCCGGTGCCACTTGAAGAAAAGCTGACTTCCTTAGGGCCACTTGGTAATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15214 TTCAGGACTAGAGACTGTGGGAGATGGGGTGGATTAGGGTTGAGCTGGAGGGGAATCAAA Gene GeneID:541250|PSRC1:NM_001046501:182_cdna Constitutive 2 NULL GeneID:541250 3 GENE PSRC1 MGC137552 proline/serine-rich coiled-coil 1 EMBV3_43487 TCTCAGCTCTGATGTAGCCACTTGGTTCTCCTGCATCCTCATTGTAGAAGAATGTGCCTC Gene BVT0101_023917 + 0 NULL GK000015.2:30094890-30107966 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058748 TCONS_00058749 TCONS_00058750 TCONS_00058747 1 XLOC_036183 Coding TCONS_00058748 XLOC_036183 Coding Coding FOXR1 15:30081749-30100773 j TSS44190 6674 2 TCONS_00058748_2 224 0.539856158225951 6 0.649476948956526 0.000385986802361695 0.000369796149773872 0.000371728283295011 0.000257199771480851 0.000215761600710273 7.51927528614045e-05 0.00040038815167765 0.000439149297367699 0.000317755447677163 0.000106169546631158 0.000170405767408598 9.38086480783875e-05 2.69269843863482e-05 0.000116987592426387 0.000115051575390076 0.000451132587290547 1.00882633990639e-07 0.000190375749109206 0.00148941936109723 0.000922474764396985 0.000308008510002611 0.00018769850989525 0.000350914456661892 4.92010546698534e-19 0.000442585941849063 0.000263110653079894 0.000504475228505353 8.65880156028676e-05 0.000150900071051481 0.000459396702738608 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1225 93.70 0.120916991309559 NM_181721.2 FOXR1 Homo sapiens forkhead box R1 (FOXR1), mRNA. 4e-123 448 81.70 0.0681750074917591 TCONS_00058748_2 sp|Q6PIV2|FOXR1_HUMAN FOXR1_HUMAN Forkhead box protein R1; 4e-47 160 69.29 0.558035714285714 0 coding 0 0 0 0 -0.541895743546914 0.155276726945507 0.0178275220955601 0.781953164194517 ATGGGCCTCAGCCTCAGTCTCTCCCGACTCTCTCACCCTGTGCTGGCTGGCCCTCCTCTCCTAACCGTGGACCTGAAACTGCAGCACGTCGACTTCTGGGCCAGCCTCCATGGCCAGGTCCCGGGGCTGCTGGACTGGGACATGGGGAACGAGTCCTTTCTGGCCTTCGCCACGTCGCACCTGCCCTTAGCCGAACAGAACCTTGCCAGATATAAACTCCGAATAGTTGAGCCACCAATGTTACCTCTGGAAAAAAAACCCAACCCTGATAAAGATGGTCCAGATTTTGAGCCCAACCTGTGGATGTGGGTAGACCCCAACATCATGTTCCCCCCTGGAAAGCTGGAGGTCCCAGAACCCAGTAAGGGGAAGAATCTGACAACCACAGCTCCCTCCCCTCAGCCAGTCCCAAAAGAAGACTTTGCCAAATGTCCGGAGGCCACAGAGGTGGAGTTGCTGTCACCCCCTGGAGACCAGTGTTCCCCTTGGAAGCGGTTTGCCACTTCCCTCAGCAACTGGGAGACAACATTTCCCCTTTTTCCGGACGGCTCCGGAAGGCTGGAAGAATACCGTGCGTCACAATCTCTGTTTCCGAGACAGCTTCGAGAAGGTGCCGGTCAGCATGCAGGGTGGGGTCAGCTCACGGCCCCGATCCTGCCTCTGGAAGTTGACTGACGAGGGACACCGCCGCTTTGCAGAAGAGGCCCGTGCCTTGGCCTCCACCCGGCTGGAAAGGATCCAGCAGTGCATGAGCCAGCCAGATGTGATGTCCTCACTCTTTGACCTTTAGTTCCAAGAACCAGCCATCAGCCCATGCCTTATTAAAGAATCTGCAGCAGCCTCGTGTGTGTGTGTGTGGTCTGAGGATGAGGTAGCACGGGAGGCGCAGGTCAGCTCTGAGGTTGGACATGGGTTGCCCTCAGAGCTGTTGGATGCTCCAGAGGCAATGGGCCGGTTGCCTGGTGTGCAGCAAAGGGAGCCCATACTCTTCTTTCCTCAAAGGAAGAAAATACTTAACCTTGTTCGAGATATCTTTTTTTCTTGGAAGATGGCTAGCATAAAGCAGCCAGCCCTGCAAAGGGCCTCCCAAATCACCACCCACCCACAGGAGTGGATGTAATCAGCTGGGGACAGTGAGGAGAGGCCTAGGGAAATGTATCGTTTATGGAATAGTTGAAGGGAATACCTTCTGGGAGGCCACGAGGTAGCAATGAGAAAGGTGAGAGGGAAGAATTTCTTTTTGAAAACTATATTTGGCTGCTCTGTGTCTTCATTGCTGTGCTTGGGCTTTCTCTAGTTGCGGCAAGTAAGGAAGGGCTGGTAGCTAGGCTGGAAAAGAATCTGCCTGCAATGCAGGAGACCCCAGTTTGATTCCTGGGTCAGGAAGATCCCCTGGAGAAGGGAACAGCTACCCACTCCAGTATTCTGGCCTGGAGAATTCTATGGACAGAGGACTCTCACAGAGTCGGACAGGACTGAGCAACTTGCACTATCACGCTTTGTTTGCAGTGGTTGGGCTTCTCATGGTGGTGGCCTCTCTTGTTGCAGAGCACCGGCTCTATGGTGGGCGGGCTTCAGTAGTTGTGGCTCCCCGGCTCTAGAGTACAGCCTCAGTCTTTATGGTACATGGGCTTAGTTGTCCTGTGGCCTGTGGGATCTTCCGAGACCAGGGATTGAATCTGTGTCCCGTGCATTGGCAGATGGATTCTTGACCACCAGGGAAGTCCTAAAGGAAAATAATTTATTGAGAAAAGGAGTAGGTGGGCTCAAGCCTCATTTCTCCCACTTAAGCATTAGTGGGGAGGTGAGGGGGATGGCCCTTTCATACCTCAGGGTTCAGTAGAAGCCAGAGCACATGGAAATTCAGGGTCCCCAGAGGCCATAGATCTCAGCTGGGCTGAGGTGGCTTTCTGGACCGCAGGAAACTGTCCAGGGCAAAGCCAGCTGCCACCCTCAGACCTGAGCAATAGGGAGAGAAGCCAGCGGGACGGATAAGAAGGGAACAAGATTCGGAGCTGTGTCAGGATGCCACAGATGTTCCCCACAGTGCTCAAAGATCATTCTGGGTTTCCCACGGGGCTGAAATACCTGTCCTTCTGCTGTTCCCCCTTACCCCGAAGCTGGCCTGCACAGAAGTATGGCTCCAGCCTCAGACACGGTCCCAGGGGACTGGGTATCACTCCTCCCCAGAGGTGGCAGTGGGTGGTGCTTGAGTCTCAGGAAGGGCGCCCCTTGTCCGGGCAGCTCCCTGGTCTCTGTGGTTGGTCAGGGTTGAGATAGTCTCACCTCTCCTTTTCTTCCTGCTCACCTTCCTGTTTCTCAGCTCTGATGTAGCCACTTGGTTCTCCTGCATCCTCATTGTAGAAGAATGTGCCTCAGGCAGCCACTTTCTCAGTGTCTTGATGAGGAAAATGAGTAAATGATGGCTTTCTTAGCACTGTACCAGGGTGGAGATCGACAGGGATGGAGTAGAGTGCTTCCTGCCGAAACTGGAACTCAGTTCTAAATAAAGGGTAGTTATTTTATTGCTTATTGTGGTGTCTAGTTAGGACACCCTCTCTGCTCCAGAAGGCTGGTGGGCTAGTAATAGCCTATGTCTACTTTCAGCACTTGGCAACTGTCAGTGGGAACTGGGACCTTGCTGTTGCTGGCAACAGTCTTGTTCTCCATCTCTGACTCCCAGCTCAGCTTCCTCTCCACAGACCACCTGTCCTCTCTCACTGTATCTCTTTTAGCACAAGTTTTCTTAACACTTCTAAACTTCCATTTCTTTTGCATGCAAATCGGGGATAATGGAAGTACACACAGATTTTGATTCAGGAACTAAATAGGACAATGGAAAGTGTATACTCCCATGTCTGGCTTATTAACATTAACACTGAGTGCTTACAGTTGGACCAGACATCATTTTACATGCGTTTGCAGGGTTAATCCATACAATTAAACCTGGATTAAAAGCCTTAAAGAGTAGGTACTGTTAATCTCCCAGGTGGCGCTAGTGGTAAAGAACTGGCTTTCCAATGCAGGAGATGTAAGAGACGCAGATTTGATCTCTGGGTTGGGAAAATCCCCTGGAGGAGGGCATGGCAACCCACTTCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGAGGGCTGTACAGTCCGTGGGATCGCAAAGAGTCTGACACGACTGAAGTGACTGAGCACACATGCACTGTTATTCTCCTCAGGTCATTGAGTGTGATGGTCATTATATTTAAGGAGTCGCCTTCATTTTCTGTCCATTTATTCAGCTCTTAATCCCTTGTAGTCTGTATCACTATAAAATCAGACTGCTTCCTCCCTGGTCTCTGAAAAGTGCTATTCTTGAAAAGTACAAGCAGTATCCCACCTGACCAAAATCTCTACCTTGAAAGAAAGGCCCCAGTTCATGTGTGGTTTGCACATTTTTGGTAACAGAAATGAAGTCTCGCCCTGGTCACCAGTCTGTCACCAGAGCCATCTCTTCTCGACCTGTTGCAGCTTTGCCTTCATTCTGGAACATGCACCAAGAGTAGTGCTAGGCCAGGGGCTCTCACTGAGCCTGGGGAGCACTGTGGTTGTGCAGTGATTTGGGGGATTGGCAGGCCCAGGAGTGTCCAATGGCAGTGTGGGAGATAGTGTCTCACCTTGAAGAGCTGACCCTTATACCTAAGGCCATTGATAATGAATGAGCTGCAAGAACCTAACCCAGTTTTACATCTAAGCAGAAACTATTTGTTGTATTGTTTTATTATACACTGACTTTTCCAGGAATGCAACTTTTATGTAAAATGAAGGAAGACTGTCCCTTTTTTCATTTGGAAGTTTACCAAGTGTTGTTTCCATTTTGGAAAATCACTGACAGCAAAGCTGCTCTGGTATTTAAGTCACCAGTACCACATCCCTTTATTGGCCTGTGTTTGTATCTGTTGTGACCACAAGGATTCTACATGTATAAACAAATATGTGGTGGTGTCAAGGTAGCCAGTATAAAGGAAAAGGATTTTCAATAATCATCTGAATGACATCTCTTAAATTTCAGCTATTTACTGTAAGAATGTGCAAATGTTTAACTGTTTCATGTTTTCAAATATAGTTTATCCATTATACTCTCATCCAATATACTCTAATTATAAATTTCTCTCCTTTTATTGTTTTGTTATATTACAGAGCATTACAGTTTATTTTTTTTTATTTTATTATTTATTTTTGGCTGTACTGGGTCTTCGTTGCTGTGCACGGGCTTTCTCTAGTTGCGGCAAGTGGGGGCTACTCTTGATTGGGGTGTGTGGGCTTCTCATTGTGGTGGCTTCTCTTGTTGCAGAGCTTGGGCTCTAGGGCATACAAGTTGCAGTAGTTGTGGCTCCCAGACTCCAGAGCTCAATAGTTAAGATGCATGGGCTTAGTAGTTCTTCGTCATGTGGGATCTTCCAGGACCAGGGATCGAACCCAAGTCCCCTGCTTGGCAGGCATATTCTTAACCTTTGGACCACCAGGGAAGTCCTCCAGTTTGTTTGTTTTTTAATGATATGAATAGGTAGGTTATTTTGTCAGCAAGGTTCACTTCAGGGTGGTAGAGATGGTTGTACAGGACTTCCCTGTGGTCCTGGGGTCGCTAAGAATCGGACACGACTGAGCAACTTCCCTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACAGGGGAGCCTGGTGGGCTTCCATCTATGGGGTTGCACAGAGTCGGACATGACTGAAGTGACTTAGCAGCAGCAGCAGTAGCAGGGTGTTAAGGGATTTGATTTAGGTCATACCTGAATGGTCTAGTGGTTTTCCCTACTTTCTTCAATTTAAGTCTGAATTTGGAAATAAGGAGTTCATGATCTGAGCCACAGTCAGCTCCTGGTCTTGTTTTTGCTGACTGTATAGAGCTTCTCCATCTTTGGCTGCAAAGAATATAATCAATCTGATTTTGGTGTTGACCATGTGGTGATGTCCATGTGTAGAGTCTTCTCTTGTGGTGTTGGAAGAGGGTGTTTGTTATGACCAGTGCATTTTCTTGGCAAAACTCTATTAGTCTTTGCCCTGCTTCATTCTGTATTCCAAGGCCAAATTTGCCTGTTACTCTAGGTGTTTCTTGACTTCCTACTTTTGCATTCCAGTCCCTTATAATGAAAAGGACATCTTTTTTGGGTGTTAGTTCTAAAAGGTCTTGTAGGTCTTCATAGAACCGTTCAACTTCAGCTTCTTCAGCATTACTGGTTGGGGCATAGACTTGGATTACTGTGATATTGAATGGTTTGCCTTGGAAACGAACAGAGATCATTCTGTCATTTTTGAGATTGCATCCAAGTACTGCATTTCAGACTCTCTTGTTGACCATGATGGCTACTCCATTTCTTCTGAGGGATTCCTGCCCGCAGTAGTAGATATAATGGTCATCTGAGTTAAATTCACCCATTCCAGTCCTTTTGAGTTCACTGATTCCTAGAATGTCCACATTCACTCTTGCCATCTCTTGTTTGACCACTTCCAATTTACCTTGATTCATGGACCTGATGTTCCAGGTTCCTATGCAATATTGCTCTTTACAGCATCAGACCTTGCTTCTATCACCAGTCACATCCACAGCTGGGTATTCTTTTTGCTTTGGCTCCATCCCTACATTCTTTCTGGAGTTATTTCTCCACTGATCTCCAGTAGCATATTGGGTACCTACTGACCTGGGGAGTTCCTTTTTCAGTATCCTATCATTGTGCCTTTTCATACTGTTCATGGGGTTCTCAAGGCAAGAATACTGAAGTGGCTTGCCATTCCCTTCTCCAGTGGACCACACAGGACTGGAAAAGCTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGCTCAAACTACCGCACAATTGCACTCATCTCACACGCTAGTAAAATAATGCTCAAGATTCTTCAAGCCAGGCTTCAGCAATATGTGAACCGTGAACTTCCAGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGGGATCAAATTGCCAACATCTGCTGGATTATGGAAAAAGCAAGAGAGTTGCAGAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGCCTTTGACTGTGTGGATCACAATAAACTGGAAAATTCTGAAAGAGATGGGAATACCAGACCACCTGATCTGCCTCTTGAGAAATTTGTATGCAGATCAGGAAGCAACAGTGAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATGTTGTCACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGATACGCTGGACTGGAAGAAACACAAGCTGGAATCAAGATTGCTGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGTAGAAAGTGAAGAGGAACTACAAAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTTAGAAAATGAAGATCATGGCATCTGGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTTTTGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAA EMBV3_42075 GTGGTGATGACAACTCAGTGGATGGAGCATCTGACAAGTATCCAGGTGCCCTTTGAGTTC Gene GeneID:786352|LOC786352:XM_002687679:5_cdna Constitutive 0 NULL GeneID:786352 5 GENE LOC786352 NULL similar to LOC512905 protein EMBV3_26243 GGCCTCTGGATGCTCTTCAGGTCTGTGTATTTTGAGGCTGGGTGGACAAAGTGTATCATC Gene BVV0102_044482 + 0 NULL GK000008.2:76664715-76667884 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225921 TCONS_00225924 TCONS_00225919 TCONS_00225922 TCONS_00225923 TCONS_00225920 1 XLOC_137881 Coding TCONS_00225920 XLOC_137881 Coding Coding UBE2R2 8:76567490-76667232 = TSS169031 4940 1 TCONS_00225920_3 238 5 0.950521851595633 0.00796169514337239 0.00524930911872972 0.00713012112571331 0.00210996116694703 0.000690390180745607 0.00191347958831417 9.11413568317303e-05 0.00292081189475526 0.00292861708243402 0.00200530705828532 0.00114561437331271 1.49943620828247e-15 0.000837511030202294 8.42888558479898e-14 0.000536653795649125 0.00180028140145694 3.81774152304665e-19 8.27835767373046e-39 0.00223671402931452 0.00571515575975081 0.00257395170125661 0.000412344532625257 0.000557043083300085 7.89639132295055e-36 0.00731747576984674 0.00725600918341508 0.00537462376137674 4.78930580321406e-11 0.000543227303684388 0.000914160833684893 NM_001206110.1 UBE2R2 Bos taurus ubiquitin-conjugating enzyme E2R 2 (UBE2R2), mRNA. 0.0 4363 99.96 0.490080971659919 NM_017811.3 UBE2R2 Homo sapiens ubiquitin-conjugating enzyme E2R 2 (UBE2R2), mRNA. 0.0 2946 80.80 0.615182186234818 TCONS_00225920_3 sp|Q712K3|UB2R2_HUMAN UB2R2_HUMAN Ubiquitin-conjugating enzyme E2 R2; 2e-177 492 100.00 0.995798319327731 1 coding 1 0 1 1 -1.55774478712162 0.00652231886579608 0.00465787518537757 0.93516368160518 GTCGCGCTTCCCCCGCCCTTCGGCCCCGCGCGCCCTTCGGCCCCGGCGGCCCCCGAGGAGAACAAGAGAGCGAGCGAGCGCGGCGCTCCCGGGCCATCACGGCCCGGTCTCTTCACCGTCGCCGGCCTTTCGCCGCCTTCCTCCGCTTCCACCTCTTCTCCCCCCCCCGCGCCAACCAAGTTGAGGCCCCCTCCGGGGGGGGGAGGCCCGAGACCCGGAGCGAATTTCTTTAACTCTCTCCACCCCTCCCCCCACCCCGGCCCGAGTGTGAGGAGAAGGGCCCGGTCCGGCCCGCGTCGTGTGTGAGGAGGAACCGGGCCGGCCCACGGGCCGTGTGGGGCCTGGTCCGGGCCGCCGGGTGTGTGAAGACAGGGGCCCGGAGCGGCCCGGCAGAGGGCGAGCGGAGGGGAGGGGCCTGGTCCGGCCCGGCTGGTGCGTGAGGACTGGGGCCCCCGCCCGGCGCCGCCGCCGCCGCGATGGCCCAGCAGCAGATGACCAGTTCGCAGAAGGCCCTGATGCTCGAGCTGAAATCCCTGCAGGAGGAACCGGTGGAGGGCTTCCGGATCACCCTGGTGGATGAATCCGACCTCTACAACTGGGAGGTTGCCATCTTCGGACCCCCTAACACGCTCTACGAAGGCGGCTACTTCAAGGCGCATATTAAATTTCCTATTGACTACCCATATTCACCACCTACCTTCAGATTCTTGACCAAAATGTGGCACCCCAACATTTATGAGAATGGAGATGTATGCATTTCAATTCTTCATCCACCTGTAGATGACCCACAGAGTGGAGAACTGCCCTCTGAAAGGTGGAATCCTACTCAAAATGTCAGGACTATCCTGTTAAGTGTAATCTCATTGCTTAATGAGCCCAACACCTTCTCCCCAGCCAATGTGGATGCTTCGGTTATGTTCAGGAAATGGAGGGACAGTAAAGGAAAAGACAAAGAATATGCTGAAATCATTAGGAAACAGGTGTCAGCCACTAAAGCCGAAGCAGAAAAGGATGGAGTGAAGGTCCCTACGACCCTGGCGGAATACTGCATCAAAACTAAAGTGCCTTCCAATGACAACAGCTCAGATTTGCTTTATGACGACTTGTACGACGATGACATTGATGATGAAGATGAGGAGGAGGAAGATGCCGACTGTTACGATGATGACGATTCTGGAAATGAGGAGTCGTGACGTGCTCCTTCAAGGCCCCTGTACTGCCCTGCCGTCTCAGGCCAAAGGGAGGGGAGCAAGTGGGGACCTAGCAGTGGCCCCTCAGCAAAAAGCTATCACGGGGGTGGGGAAAACAAACACGGCTCCTGCTGATCCCCTTATGGATCTCAGTTTGCTCCTTTTTACGGACCTCTTAATGGAGAGAAAGTAGTCCTCCACAGAATGTCTGAATTCTTGCATTCTTTACCCTTCCATCACTGTATTGATTCTTTTTTTTCCCCTTTCTTTAAATCCAAACTCGCCTCACTTCGTCTCTACAAAGCGTTCACAGCAAAACACGTTTGGTCCATTTTTAGATTCTTGAAGAATTAGTCTTTCACCAAGACGTTTAATGTGTTTAAAGCTGGGAACCCATTGGGAGTTCACAAGTGCTGCATATGCTGGGTAGCAAAAGAAAACAACCACAAAACCCCCAGAAAACAAACTTTTTTTTTTTTTTAAGCAGATTTGCCAAGGTTTAGCTGCTCATTTACGTGTGTGTGCATTTGTTCAGCCCCATGATGGTGAGTTTTGTTTCTTAAGGCTGGGGTACAGTGGGCGTCAGGGACTTTGTTCTGAACCTGATGAGACATGTTCCTAAGGGCACAGAACCGTCAGCCTCCAGGAAATCCTCCTCACACAGAAGAGAGGAATCAGATTTTGTTTTTTGAAATTGGGATCTAAACCCTGAAATAAATATTCATACTTTACATAGAACTGATTGCTATTTATTTTGAAGGCAGAGTTATTTTTGCCCCGCAGGGAGTGGGGGGAGAGAGGGGGGATTAGCGTGAGTGTGTGGAGACTTAGTGATGGGAACAGAGATTTAAAATCACTATGCCAGTTTTGGTTGATGCTGCTGGGGGAAAGTCAAACTGCTGGTGACCACTGTTGGGAGAGAAAACATCTGTTTCATATATGTAACACGGCCTTTCCCTGAAAGATACACTCTCACGAGCATTTTTTTTTAAGTAGCGAGGTTTTAATTACTCAGTATTAATACTAGGTGCATGTGTTTAAGATTTTGGTTTTCATTGAGCTGCTTATACTGATAGTGGTAACTGTGGATATATGTGAGACCTGAGTGACTGGTTCCCGCTTTCCTCATTGGATGTGACCCCGACTTTTGTCTCCTTTTGATGTACTCGGGCTGCGGAGTACAAGCAGAAGTTGTGCATGGAGCTTTCCCCTGAGCTGCTTTGTCTCTTCTGGCAGGGCCAGGGGAGTTGGCTGCAGGCAGTGTCCAGGCAACACTACATCTTCCTGCCGCACAATTACTGCAGCTTTGATTTCCCTTGTGCCGATTGTGTGTTACTTCAATCAATATCAAGTTCCATCAGCCTTCACCAACCAGGGACTTCTGTACGTGGCGATGATTTTTGTTTCTTGTGGGGGCGGGCCAGTGCGTAAGAGGGCAGTGTTCTTTTCAGTGGGAAAAATACCGCTATGAACTTACTTCAGATCCCTGTGCGCTAGCATCAACTCCTTTTCTTCAGATCGTACAGCTCAGAAAGAATGAAAGGGTTGATGAGGGACAGGGGTAGGATGGATCCTAGGACAGAGTAAGTGATGCTTAGGTCCTTAGTTCCTCCTTCCTTTCTGATCTCAGGGTTTTCATTCGCTCTTCAGACTCTCCAAACATTTGCTGACTAATTCCCAGCAGCCCTCTTTGGAATCTTAGGTTTGGTCTAGTATTAAATCGGGAACGTTAAACATGCTAAGGTTCATGTGGGACAATGTTGAGCCTGGTCCCAGAATCTGTCCAAACTCCATGGGGCTACCTGCACCTCTGAATCAACAACTGTGGTCAGATTCAGAAAACAAAGCAGCTCTCTTGTGATGAATAGTGACGCTGAAAGTAGCTTTTTACGCCCCACGTGTACTCTCACCCTCCACTACTACACACACACACACCCCACCCCCGCCCCCCACGTTTACAGCCAGTAGCTTGGTCTTACTCTTGGAACCTTAAAACTAAGCCTTTCCCCTTCCTGCTGAAGCATTTCTCTCCCAGGGCAGGCCAGACACTTTGGCATTGTGGGAGGTGCTGTCCCATTAGGCCCTGTGGCCTCTGTTGCACATTGACTCAGGGAGCCAGAGAGCCAGGTGGAGGTTGTACCTCTTAGCCCTTTGGGGTTTACTTTTGAGGGCTAGGTTTGCCACTGATGAGAGTACAATCAATTCCAGAAAAGACGGGTGTGTGTTGATTTGCCAGAATTGCTAGAAGGTGGACGTTCGGATAGCTCTGACTTGTAAACCCAGGTGCTGGTTCCAGAGCTCTGTCCTGAGAACACCAGACACAGGAGACCTTGAGCATGTGGTTGCCTTTGGGAGTGGAGATCTCGGGCTCAGGCCGCAAACTTGGGAGTACAGTTGTGCTGTTTGGTGTAACATGAATTCAGAAACCACCCTGCAATTTGAGGTTCCTTCAGATTCTAGCGGAGGCCTCTGGATGCTCTTCAGGTCTGTGTATTTTGAGGCTGGGTGGACAAAGTGTATCATCGTGATTTTGTTGTTGCTTCTCACAGTCTTCCCCACTTTCATTTCACATCATTCCAGAGTTCTTTTCTGTTAGCCAAACTTTTTTGTAGTCCCTTCTTCTTTCCTGGTAATTATTTGCTTCTTTATTTGCTGGTTTCCTTACGTTTGGAAAATACATAGTAAGTGATTGAAGGGGAAAATGTGTAGTTCTCCATTGAAAATTAACCCTCCACCCCACCCCACCCCCATCCTGATTTTTAAAAAAAGGTTTACATTTACAAAGATTCAGATGCAATTTTCAACTCTTCTGAAACCAGCAGGACACACCTGACTTTAATAGTTTTCTTAGCTGAAATTGTAGATGTTTTTCTTCAGTTTAACTTATGAGAAAAGATTATCTGATGCATTTTGTGTTCAACTTCCCCTTTAGTGGTTTATTTTTGTCTTTTTCTGCCCATCTGTCTACTAATAAAATGTGAAATAAAATATACCTGTATTGCTACTTCCCCATGGAATGACCCTTTTCTTTTTTGTGTGTTAAAAGGTGATCTTAATACTTCCTGTGTTCCAGATTATACACAGGACTCAGCTGAAAAATTTAAAAAAAAAAAAAAAAAAACAAATCCTTACTAGTTTAAGAAAGGTTACTAAAGACATGTTAACCTTAATTCTGAAATAGGGCACAATCTGCTGGTACAAGTAGGTCGATGACTGACGGACGGGTGCTCCACTGCCCTCCTTAGGCAAGTTTTTTGTTTTTCTTGTCGCTTGTCATCTTAACTTCCTGCTGTTAAAATCAAGTGATTAGGAGGCAATAGGTGCCATGATAGTGATAAGTTTCAGTTGTGGACACTTAACCTTTTAAGCCAGCCAGCGGTGCTCAACATATCTGACGAATGACCGTTGATTTTAGAGGTCAAAAGCAGCGGAAATGAGGACTGTGCCCCCGGGCTGGTTCCCATCCAGCCTGCTGACCTGAAACCAGACGCTATAATGTAATGCTCTGGGAAACAGCTCAGGGCCCTGAACTAGCTGCCAGGTTGAACTACATCTATGCATCGACAAGCATGGAGATTTGCCTCCTGGCAAGACACATGGATAGTTTTATGGCCCCGGTTCCTTCTGCACTGGTGGCCTGGAATCAAGAGGGAGGAGCTTAAGGGAAGTCAGACTCCTGGCCTCAGGTGAATAGTTCCTTGGGACCTTGTAGAGCAATCCTTGGGACCTTGTAGAGCAATTTAGCTCAGG EMBV3_26710 CTCCAGGCAGCCCCCGCTGTCCCTTTCTCAGTGTGACTTCCTGAGTTTGTAAATGTGAAA Gene GeneID:511215|CHST10:NM_001098011:47_cdna UTR3_Alt 2 NULL GeneID:511215 11 GENE CHST10 NULL carbohydrate sulfotransferase 10 EMBV3_32169 TGACGGCTTTGCCTGTTCTGAACTCGTTAGGGGACCAGATGACTTATTTCATGCCTTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34980 CCCAGCAATACAGAATCCCAGAATATGGGGCAAGATGATCAAGGAGCATGAAAATTTCTC Gene GeneID:522311|ITK:NM_001105388:11_cdna Constitutive 2 NULL GeneID:522311 7 GENE ITK MGC165932 IL2-inducible T-cell kinase EMBV3_08039 GTTAGGTAAATGCAAATCAAAAGCATAATGAGATATCACTTCAATCCCCAGATATGGCTG Gene BVV0101_024875 + 0 NULL GK000001.2:30303947-32836013 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25284 GGTTCCTTCATCAGCTTCAGGCCAAGCTCGAAGTTACTATGTCGACTGGAGAATGTTGCG Gene GeneID:445421|MRPS14:NM_001003902:40_cdna Constitutive 0 NULL GeneID:445421 16 GENE MRPS14 MGC133544 MGC159688 mitochondrial ribosomal protein S14 EMBV3_38554 GAAGTTCATCCTGTGGCGGCGGTTCCGCTGTGCCATCATCTTCTTCCTCATTCTCTTCAT Gene GeneID:508157|DYSF:NM_001102490:65_cdna Constitutive 0 NULL GeneID:508157 11 GENE DYSF FER1L1 MGC152169 dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) EMBV3_10325 CTTGTTTAACTACTTCGGATTGGCAGCATTGTAGGCACTTGTGGTGAGGGGATAGCGACC Gene GeneID:100297937|LOC100297937:XM_002698851:63_cdna UTR3_Alt 1 NULL GeneID:100297937 28 GENE LOC100297937 NULL hypothetical protein LOC100297937 EMBV3_17930 CCATCTGCTGGCCTCTACACTACCCTACTCTCATGACTGGACGTCTCTGTGCCAATCTTA Gene GeneID:783918|LOC783918:XM_002690665:233_cdna Constitutive 0 NULL GeneID:783918 10 GENE LOC783918 NULL similar to olfactory receptor, family 11, subfamily G, member 2 EMBV3_05414 AGTTTTGCCATGGGCTCAATTTCCCCCCGAGACTTTATCAACTTAGTCTCTGTGAAGCAC Gene GeneID:532195|STARD6:XM_002697829:512_cdna Constitutive 0 NULL GeneID:532195 24 GENE STARD6 NULL StAR-related lipid transfer (START) domain containing 6 EMBV3_24358 CTTGATCTGGGATTTGGGGCAGGAAATGTCACCGCTCTCCGCTCAGCCCTGGGAAGTGCT Gene GeneID:615451|LOC615451:XM_002687254:100_cdna Constitutive 0 NULL GeneID:615451 5 GENE LOC615451 NULL similar to keratin, hair, basic, 1 EMBV3_19775 GACGGGAAATGCACCAAATGCCAGTGTAATGGCCACGCGGACACATGTAATGAGCAGGAT Gene GeneID:100336898|LOC100336898:XM_002695147:702_cdna Constitutive 0 NULL GeneID:100336898 18 GENE LOC100336898 NULL Multiple epidermal growth factor-like domains protein 8-like EMBV3_28175 CTACATCAGCCTTGAAACAAGTTACTAAAGCTGCTGAAATAGTTCAAGAAATTGAAAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05563 CCATACCCCTTCCTGAGAGGCGAGCACAACTCCACCTCCTACGACTCTGCAGTCATTTAC Gene GeneID:618298|TMEM182:NM_001083784:66_cdna UTR3_Alt 2 NULL GeneID:618298 11 GENE TMEM182 MGC140262 transmembrane protein 182 EMBV3_42180 AAGCAGGTCGTCTACGAATGGTTTAGCACCAGGCGCCCCACGAACGTGCGGTGCGTGACG Gene GeneID:781039|LOC781039:XM_002685429:32_cdna Constitutive 1 NULL GeneID:781039 2 GENE LOC781039 NULL similar to pericardine EMBV3_22927 ACACCCCAGGAGGTGTCCGCTGTGAGACACGCAGCTGGGCGTGTACAGGAGCTCCACCGT Variant GeneID:520201|TRIML2:XM_002698678:180_cdna 65^947 1 EMBV3_23840 GeneID:520201 27 GENE TRIML2 NULL tripartite motif family-like 2 EMBV3_22447 CCCCTACGAGAAAAAGATCTCGGCGATCAGGGACCAACTGGATGATTGAGATCCTGAGCT Variant GeneID:531192|SULT2B1:NM_001081726:295_cdna 119^258 1 EMBV3_04098 GeneID:531192 18 GENE SULT2B1 NULL sulfotransferase family, cytosolic, 2B, member 1 EMBV3_12339 ACTTTGTAATCCGGATCCAGGATGGAACTGGTGGGTAAAACAGGAATCTGAGATTTCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09728 GCTACATTCATGGGAGCAGCCAGGTCCAATTCGTGGCAGAGTCACACATTATTCTGGTAC Gene GeneID:615007|TUSC3:NM_001080914:16_cdna Constitutive 0 NULL GeneID:615007 27 GENE TUSC3 NULL tumor suppressor candidate 3 EMBV3_07648 TAAACAAGGGTGTGAGAGGCCTGATGGACCTGGTTTCTACTGGCATCGGGGAAGATTCCT Gene BVT0102_351917 - 1 EMBV3_06539 GK000027.2:266109-288916 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43566 GGGTGGTTAATTCCAACGGGTGTTCTTCTTTGGGGGCTTCTGAAAAGTCAGCTTATCCTC Gene BVT0102_132979 + 0 NULL GK000010.2:54153427-54281615 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00164 TATATAGTGCCCAAGATTCAGGGTGGAAGGGGACTACACAAGGGCATAAACACGGAGGGA Gene BVT0102_087711 + 0 NULL GK000024.2:50289405-50322212 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140523 TCONS_00140526 TCONS_00140522 TCONS_00140519 TCONS_00140517 TCONS_00140521 TCONS_00140524 TCONS_00140518 TCONS_00140520 TCONS_00140525 1 XLOC_085145 Coding TCONS_00140521 XLOC_085145 Coding Coding CCDC11 24:50320351-50363246 j TSS104863 3650 1 TCONS_00140521_1 334 0.289315068493151 8 0.915093020002798 0.000282779782929024 0.00170890314866862 0.000717221345787051 0.00082309919900528 0.00124124278580224 5.60807094965563e-05 7.35354165405752e-05 0.000256292892661846 0.00018555070232905 5.44165374178965e-05 2.76337803513215e-22 8.97539316886839e-54 6.8021064491351e-06 3.32752187167025e-05 0.000737336410541533 3.58869185037648e-108 2.72142821604618e-05 1.65052871983626e-05 0.000356582528295886 0.000456483626076794 4.5584022003607e-05 9.71198435475205e-06 2.23069249759244e-82 2.65961236036961e-05 0.000536658171869108 0.000224085162201564 0.000760751757677413 4.22480215056832e-16 3.20296281920738e-57 3.33042955083889e-88 XM_005224251.1 MBD1 PREDICTED: Bos taurus methyl-CpG binding domain protein 1 (MBD1), 0.0 4174 99.91 0.635342465753425 NM_145020.3 CCDC11 Homo sapiens coiled-coil domain containing 11 (CCDC11), mRNA. 0.0 1970 84.83 0.482465753424658 TCONS_00140521_1 sp|Q96M91|CCD11_HUMAN CCD11_HUMAN Coiled-coil domain-containing protein 11; 0.0 551 83.13 0.991017964071856 1 coding 0 0 0 0 -0.13780254946047 0.343308698666685 -0.0162708805630503 0.812351216101988 GCGTCTGTGGTCACCATGGTAACGGGACCAACTTCCGCCCCATTCACCTGTCCCTAGCCCCGCGAGGCGCACCACTGGCAACCAGACCAGTGCATCTCACAAGCTCGTCCCGCCGGTAGCTGTGGTTGGGGAACCGCAGCGGACACCGCCCCCAACCCGAGGAAGCTCCAAAATGTACAGCCAGCGGTTTGGCATCGTACAGAGAGAGGTTAAGGGGCCCACTCCCAAAGTCGTGATCGTGAGAGCCAAGCCTCCCAAAGGCCAAGGAGCTGAGCATCATCTGCAAAGAATCCAACACAGCCATCAGAAACATCATGCTATTTTGGCTTCCATTAAGTCAATCGAGCGGGATCGCTTGAAAACTGAGTGGGACCAGCACAATGACTGCAAGTTTGTGGACAGTCTTGTGAAAGCAAGAGTCAAGGATGCCATGCAAGGGTTTATCATCAACACTGAAGAAAGACGAAATAAGTTACGTGAACTTTTAGCATCGGAGGAAAATGAGTATTTTACTGAAATGCAATTGAAAGAAGAAACAATTGAGGAGAAAAAAGATAGAATGAGAGATAAAATAAGATTATTAAGAGAGAAGAAAGAAAAAGAGAGACAGGATTTTGTGGCTGAAAAGCTAGACCAGCAATTCAGGGAACGCTGCCAGGAGCTCCGCGCTGAGCTGTTTTGTATCCATCAGAAGGCTGTGTGTGAGGAGCGTAAAGCTCAGATAGCGTTTAACGAGGAGCTGAAAAGGCAGAAGGTGGTGGAAGAACAGATGTTCTCAAAGCTCTGGGAGGAAGACCGCCTGGCCAAAGAGAGGCGAGAGGCTAAGGAGGAGAGGAGGCAGAAGGAGCTCGTGGAGAACACGCGCCTGGGGCTAAATGCCCAGGTCACCAGCATCCAGGCGCAAAGGCAGGCGGCACAGCGGCTGAAGGAGGAAGAGGCACTACTTGTGGAAAATGAAAATGCACAGGTGAAACTTGAGAATGAACAGGATAAGCTAAAGAAACAGAAGACAAAACAGGAAATAAGGGCTGCTTTGCAAAAAGCCCTCCAAGAGAAGATGGAGCGTATGCAGCAGGAATACAGAGAAGAGCAGGATTTGAACATGAAGCTCATGCAAAATGCCCTTCAAAGTTTACAGGAGGAGACTGATAAAAAGAAGCAAAAAAAGAGGATATGAGGAGAGAACAGAAGATATATTATCAATACTTGGCACAGCGGCATGAGGAAGAAAAAGCTCAGGAGAAAGAATTGGATAGAATGTTAGAGAAAGAGAAGGAAAAGAAGTTTGCTGAGAAGGACAAGGAGCTGAGACTTGAAAAGGAGGCAAGAAAACAACTTCTGAATGAGGTCATGTGTACAAGAAAACTTCAAGTTCAAGAAAAGTTGCAACGGAAAGCCAAAGAACAGGAAGAACGTACTATGGAACAGGAACGTATAAATGAAGGTCTTAAAGAGCTTAACTGTGAAGAGAGGGAGAATTTTATAAGACGCTGCAGTTTAGCCCAGGAGTACAGGAAGCAACTTCAGATGCAGATATGCTCCCAGCAGCAGGCCCGGGAAGCAGAAGAGGAAGAGGAGCGCCGAGAGTTTGAAGCGGGGATAGCAGCAGAAAAGAGCTTCCAGGACAAGATCCAGGGGATCCTGTCCACCCACCAAGTGGTGCCCCGAAACATCCATCCCATGCGAAGGGCATGTTCTACTAAGCTTCCGCCATAGTTGCATAAGCACCAACCTATTTTTTCTCAGTCTTTTGCTATTTTAAAATACAGTATGTCTCTTTTAACTCATGGATAAATTGTTCTTTTATTCTCTGAGTTTCCATAATTATATGCCAGGAAATTTTCTTCTTTCAAATTAAACTGCTCCTTTCCTAGACTGTCAAGAATGATCCACTTCCTGTGATGATGAATGACCCACACAGTTAATAGTCCTGACTTACCTCCATGCCTCCCTTTCTTGTTCATTTATTAGTAGCTTCACTTTCTTTCATCTGTCTGCCCATATGCCCATTTCCTCTTGCTTCCATTCTCTTCTCTCCTGTAGACATAGTTCTCTCCCTCTGTGTTTATGCCCTTGTGTAGTCCCCTTCCACCCTGAATCTTGGGCACTATATAAAAAATATGTTCATTTACTGGTTAAAAAAAACCAAGGTAGAAAGAAGTCAACAATGGTCATATTCCTAACGCTCAGCATTATCATTATTTTCACTTCTCTGAGTTCCCTCCCAGGCTTTGTTATATGGATACTCATTTTTGTTTTGTAAACACACTGCCATGTTGCTTCACCTACCATATTTACAAACGGATGCGTGATAGTCTACTGGGTTAGTGTATTATGATTTATTAAACAATGGACTTTGAGTTTGTTTCAAATTTGTCCCTATAGCAAATTATTCTATAACAACATTCATTTGAATTACTTCCTTAGAATCCATCAATTCCCAGGTGTGGGGTTTCTGGGTCAAAGGGGATTGACATTTATATACTTTTACTTCCAAGTACCATATTTGCAAAAGCAGTTTTTAGAGTTGTAGACTTTTAGGGAAGTGTTTTCAGGGCCAATTGATATATTCCCTGATAGTTTAAAAATGTCTTTAAGCAAATTGTTTGCTGGAATTTCTGAGAGGTTTTTTTCTTTAACCTTTCTACCCATTCATCACTCTTACCTCAGCTCTGGAAGTCTACCTCCTCTGGATCCTTTCAAGCCCCCTTGAAAGTTAATCTCTAATCCAAAAGTAGTTAATCTCTAATCCAAAAGTAGGAGTCTTGGCCAGGAAAAAAAAAAAAAAAGGAAAAAAGAGGACTATCTTTAAGTTTTGTTGAAAATAAGCTGACTGTTATTATAAGGGTGTATTTCCAGACTCTGTTCCATTAATTTATTTGTCTGTCCTCATACCAACACAACACTGTGATAAGTACTGTAGCCTTAAATAAGGTTGAAATTGCTAGTGTAGCGTCCAAATTTTTCTTTTTTTCCCCCAGTTTTTGTCTATTGTAGATTCTTTAAATATCCATATAATTGTTAGGATCATTTTGTCAGTTTCTACAAAGATGCCTACTGAGATTTCGATAGAGATGGCATTTACTCTATAGATCAGTTTGGGGAGAACTCCCATCTGAGCAATAATGAGCTTTCCAACCCATGAAGAAGGTCAACCTCGTCGTTCGCTTAGGTCCTGTTTAATTTTTTAAGCAGCGTTTTATGGTTTTCAGTGTGCAGGCCTCGTGCTTCTCTTGTTAAGCTTGTTCCTAAGTCTCGCTCTGTAATGCTGTTGTGAACAGAATTGTTTTCTTAATTTCAGTTTTGGATTATCCATTATTAACGTGTAGAATAGAATTGATTTTTGTACATTGAGCTAGCATCCTGTGACCTTTCTAAATTTACTCATTCATTCTAGTAGTTTGTTTTTTGCGTTTTGTTTGTTTTAGATTCTATCGGATTTTCTACATTCAGGATCATGGCATTTGAAAATAAAGCCTTTATTTTTTTCCAGTCTGGATACCTGTTGTTTCTTTTTCTTGCCTTACTGCACCAGTTAGTGCAATATCAAGTATGATATTGAATAGAAGTGGAGAGAATGGACATTCTTGACTTGTTCCCAGTTTAAATGGAAAACACTCAACTCATTTCTTCACCAGTGAGTATTATGT EMBV3_17901 AGGCCCCTGTAAAATTGAATCCTGATGTCTCAGGCTGGGGAAGATCAAGGAGAGACGACT Gene GeneID:529759|SDC1:NM_001075924:162_cdna Constitutive 0 NULL GeneID:529759 11 GENE SDC1 MGC139976 syndecan 1 EMBV3_28418 GTCTGCAAAATATGAGAGTGCCTACCGGGCTGTGGTATGGAAGATAGACCGGCTTCCTGA Gene GeneID:100140704|STON1:XM_002691317:452_cdna Constitutive 0 NULL GeneID:100140704 11 GENE STON1 NULL stonin 1 EMBV3_20409 TGCAAGGTCTGCTTCACCTTCTCCCACCCTAAAAGAAGGGCTTTCAGCCAGACTTTACCT Gene GeneID:504707|TRADD:NM_001045896:111_cdna Constitutive 0 NULL GeneID:504707 18 GENE TRADD MGC137615 TNFRSF1A-associated via death domain EMBV3_09028 ATTCTAGCTCAGCAACCATGTGACCCCTCAGGCAACAGATTACCTTCTTCGTAGCTCATC Gene BVV0102_410645 + 0 NULL GK000030.2:118470518-118534481 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03129 AACCAGGGGGCTACGGCCCAGTTGGGGGCACCTTGCACTCAGGAGCCCCTCCTGCTCCAA Gene BVT0102_384729 + 0 NULL GK000001.2:153898143-153971501 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012066 1 XLOC_007616 NonCoding TCONS_00012066 XLOC_007616 NonCoding NonCoding - 1:153940838-153941167 - TSS9143 329 1 0 0.00041354793939193 0.000152711777485472 0.000703191901491804 0 0 2.17449993425523e-05 1.77255714149403e-05 0 0 0 0 0 0 0 0 0 0 0 0.00115519600433551 8.7433767064324e-05 7.38171086865088e-05 0 0 0 0 0.000107074031452764 8.90448096956932e-05 0 0 0 0 noncoding 0 0 0 0 0.0752060249391018 0.504726810239101 0.0440778067213425 0.428210838807536 GGCAGAAAAGGCCTGGGGTATGAGGCCCAGCGTGCCCACTGGGCCCCAGGAGATGGGGGCTGGTATGGAGGCCTGAGCAGGGCAAATCTGCAGCCTGGGCCAGCCCAGAGGGTGCCCGTCTGCTCTGTGGGGTGCAGGTGGGGGAACCAACCAGGGGGTGGCCACCACTGCGGAACCAGGGGGCTACGGCCCAGTTGGGGGCACCTTGCACTCAGGAGCCCCTCCTGCTCCAAGCAGAGGGCTCTTATTTGACCCTACGGAGATGAGAAGAGAATCCTGGTGATGCCTGAGGCTGAATTTCCCACTGGACAGGTAGAGGCAGAAGAAGT TCONS_00002737 . 5' 27960 TCONS_00002737 . 5' 27960 EMBV3_33487 TCTGTCAAAGAGGGAGGTGGTAGGAAGAGGTAGGGAAGAATGAGCTGAACTTGGAGCTTG Gene GeneID:767615|TRIM9:NM_001076537:139_cdna Constitutive 0 NULL GeneID:767615 10 GENE TRIM9 NULL tripartite motif-containing 9 EMBV3_01355 AGGATGGGCAGGAATGTGAGGGATTCTGTTTTCCAGCAGTGATGAATGTGAAGGAAGTGC Gene BVV0102_142219 + 0 NULL GK000021.2:27945108-27947772 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120875 TCONS_00120874 TCONS_00120876 1 XLOC_073291 Coding TCONS_00120875 XLOC_073291 Coding Coding MTMR10 21:27945576-27984575 j TSS90195 5176 1 TCONS_00120875_4 527 15 0.867659879993846 0.00090741331098795 0.000594328209095036 0.000689936316224816 0.00176761310358712 0.000966056631153483 0.000216471491135625 0.0005551688481682 0.000469140946266463 0.000407338226616153 0.000289401945212019 4.41894662009433e-05 7.13791110280085e-06 3.49005328448495e-09 3.57603279639147e-05 0.000251724520933811 0.00651208331848241 0.00148333900018807 0.00474070689470435 2.58428797276506e-08 0.000482543157870519 0.000177365676194177 0.00242551299539091 0.002067131225966 0.00117662905751464 0.00117390603208946 0.000550228033590177 0.000858171945136655 0.000741122082153136 0.000444762194288873 0.000985478736665021 NM_001193073.1 MTMR10 Bos taurus myotubularin related protein 10 (MTMR10), mRNA. 0.0 4268 99.96 0.457496136012365 XM_005254508.1 MTMR10 PREDICTED: Homo sapiens myotubularin related protein 10 (MTMR10), 0.0 2251 81.46 0.440880989180835 TCONS_00120875_4 sp|Q7TPM9|MTMRA_MOUSE MTMRA_MOUSE Myotubularin-related protein 10; 0.0 936 85.58 0.998102466793169 2 coding 0 0 0 0 0.437817854892497 0.0294820093208638 -0.0577409342685067 0.238252435068189 GTGTCCCCGCCCGTCAGCCCGCCCGGCCCGGCTGGCTGCAGACCGAGCCCGGGCAGTCGCACCGGGAGCTCTCAGCCCGCGGGCGTCGGGAGGCGGGTCCCGGGCCGCGACCGGGCCGGACCGAGCAGGCGGCCGCATCATGTTCTCGCTCAAGCCGCCCAGACCCACCTTCAGGTCCTACCTCCTGCCGCCGCCCCAGACTGACGATAAGATTAATTCGGAACCGAAAATTAAAAAACTGGAGCCCGTTCTTTTGCCAGGAGAAATTGTTGTAAATGAAGTCAATTTTGTGAGAAAATGCATCGCGTCGGACACAAGCCAGTACGATTTGTGGGGAAAACTGATATGCAGTAACTTCAAAATTTCCTTCATTACGGATGATCCAATGCCATTACAGAAATTCCATTACAGAAACCTCCTACTTGGCGAACATGATGTGCCTTTAACGTGTATTGAGCAAATAGTCACACTAAATGACCACAAGAGGAAGCAGAAAGTTCTGGGTCCAAACCAGAAGCTGAAATTTAATCCAACAGAGTTAATTATTTACTGTAAAGATTTCAGAATTGTCAGATTTCGCTTTGATGAATCCGGTCCTGAAAGTGCCAAAAAGCCAGCAAAGCTAATGGAGCACCCTTGGGAGCTGGGGGCGGCGGCAGCCAGAAGACGCCACTGTTCGAGACGTACTCAGACTGGGACAGGGAGGTGAAGAGGACAGGTGCCTCGGGCTGGAGGGTCTGCTCCATCAACGAGGGCTACATGATCTCCACGTGCCTTCCAGAGTACTTTGTGGTGCCGAGCTCGCTAGCAGATCAAGACCTGAAGGTCTTCTCCCATTCTTTTGTTGGAAGACGGATGCCATTCTGGTGCTGGAGCCACTCGAATGGCAGTGCCCTCGTGCGCACAGCTCTCATAAGAGATGTGCTGCAGCAGAGGAAGATTGAGCAGAGGATTTGTAATGCAATAACTAAAAGTCATCCACAGAGAAATGATGTCTACAAGTCAGATTTGGACAAGACCTTACCCAACATCCAAGATATTCAGGTGGCTTTTGTAAAACTTAAACAACTGTGTGTTAATGAACCGTTTGAAGAAACTGAAGAGAAATGGCTGTCTTCACTGGAGAATACACGGTGGTTGGAATATGTAAGGGCATTTCTTAAACATGCAGCAGAACTCGTGTATGTGCTAGAGAGCAAGCGTCTGTCTGTAGTGCTGCAAGAGGAGGAGGGAAGAGACCTGAGCTGCATCATAGCTTCTCTGGTCCAAGTGATGCTGGACCCCTATTTCAGGACCATCACTGGGTTTCAGAGTCTGATACAGAAAGAGTGGGTCATGGCCGGATATCCATTCCTGGACAGATGCAACCACCTGAAGAGATCGGAGAAGGAGGCTCCTGTGTTCCTGCTCTTCCTGGACACCACGTGGCAGCTGCTGGAGCAGTGCCCGGCGGCCTTCGAGTTCTCTGAGACTTACCTGGCGGTGCTGCACGACAGCACCCGTGTGGCCCTGTTTGGCACCTTCCTGTTCAACTCTCCACACCAGCGTGTGCAACAGAGCACGGAATTTGCTATAAGCAAAAATATCCAGCTGGGTGATGAGAAGGGTTTAAAATTCCCCTCCGTTTGGGACTGGTCTCTCCAGTTTACACCAAAGGATCGTACCCTTTTCCACAACCCCTTCTACATTGGAAAGAGCACGCCCTGTGTGCAGAATGGTTCTGTGAAGTCCTTTAAAAGGACAAAGAAAAGCTACAGCTCCACACTGAGAGGAATGCCAGCCTCCTTAAAGAACGGCATCATCAGTGAGGAGGAGTTACGGCCAAGAAGAAACTCACTAATCCTGCAGGTGAAGCCAGCGCCTCTAGAAACGAGGGACAGCCAGGACTGGGGCGCGGAGCGGTTCTTCCAAGAACGGGCCTCCAGGCCGGCCGACCTGCATGGGACCATCCTGCCACATCTCTCAGGTGCGCACATCAAGCTGTGGAAACTCTGCTACTTCCGCTGGGTCCCCGAGGCCCAGATCCAGCACGGGGGCTTCATTACGGCCTTCCACAAGCTCTCACTGCTGGCCGATGAGGTGGATGTCTTGAGCAGAGCGCTGCGACAGCCCCGGGGTGGCCCCATGCCAGCCCCCGGCCCCGAGCTGGCCCCAAGCAGGCTGTACTTCTGTGCCGGCGGCCCACACGATGCCCCAGGCACGCCGGACTTCCTCTCGTCCTCCTTCCCCTTCTCCCCGGTGGGCAATCTGTGCAGGCGGAGCATTTCGGGGACACCGCTGAGCAAGTTTCTCAGTGGGGCCAAGATATGGCTATCCACTGAGACCCTCGCCAATGAAGACTGACCATCCTGAGGGACGAGCGGGACTGCCGACCCATGTGGGGCCAAGATATGGCTGTCCACTGAGACCCTCAAACGTGGAGACCAAGGGGGTCTTCCTGCACGTCCTGAGGGGTGAGCAGAACTGCTGCCCTACAGGTCGGACACACTCATCATTTATCTGTAACAACTGAAATTTGCACTAATTCTTAAAAACATGTTGAATTATGTTTTCTTCACAGTTTTTTAAAAGACAGGCCTAACTTTTGTTATTTATGTTCTCTCTCTGTCATGCTGGGTCAGGCTCGTTTTTAGGTCATTTGCAGGCAGACATTCCCATGATTTTATTACTGTGATCAGACTAATCAGGTTTTGTGTGTGGCATCTGTCTTTCTAACCACCTACTAAAGCTTCCCTGATCCTTGGTCGGATTAGCAGCCCAAGCAGCAACCATCAGGGGAGTCAAGAACTAGTGTCTGGTGTATTTTCAAGAAGCATCCAGAAGACCCCAGTGGGTAGTCATGGGTATACGTGCATTTTTCTGGTCACTTTCATTATCTCTAGTTGAACTCACCTGAGAGTTGTGTGTTCCCACACTGTAATTTATTTTAGATTGCTGTCTGGGACCGTAGATCACTGTGTTTTAAAATCATGAGTTTGCTTAGGGCTAACTTTAAAATGATGTGCACTGTTGACTTCAAAAGCATTTGCTGTAGATAATATAATTAAACTTAGAAGTGCCTTTGATTATTAACTATTAAGATATGAATAGCACAGAGTAAAACAATTTGAGTTAGGATATCAGAGTCCCATCACACATCAGAAGGAGGCTAGTCATGAAGCCTCCAGCTAGAGTCACCTGGACACCCCAGGTCTGGGGGTCGGAGGGGAGCAGAGCCAGCACTGGCAGTATTACTGAGACCCAGCCACTCTGGGCACCTGCCCATGGAAAGGGGTGGTGAGCTCCCGAGTCAGGTCACCTGCAGGGAAGGACAGAGTGCCTGGCACTTGGGGAGGAAGGGCAGGTGAGTAGAGGTGGACTTCTCTCAGGGTATTGCCATTGTAACCAAGAGCGCTTGCCCTGCCCTGCCTGTGACAGCAGTGCTGAGGAGCCAGACGAAGACAGGTGTGCTCTTGTCTGAGCTCCTGATGGCAGGTGCTATGCCGGTTAGAGCCACCACAGCCTTCACTTTTGGGAAAAGATGGATGTTTGAAATATAGCTGTCATATCGTTGTCTTTTGTCTTAAACTGCCATCTTACGCTTTTCAAAAAATGTTTTAAAGTGTGCAGTTAGATTATGTCCTTTTCTAAAACAGGTTTTTTTCAAAACAGTGCTTTACCTTCATATGTAACAAACAGGTATTTCTGTTTGAATTACTTGCCTTTAAAAAATTGTTGGATAATGTCTCTGGATTTAAAAGGATGGAAGTTCCTATGCAGTGTCTAAGGAAGTCCATCTTGTGGATAAACCCAGTGTTTCTCCCAACCTGCCTAGAAAATAAGGGCTTTTTTAGTTATATAAGTTTATATAAGTAGCACTGTTGCCACAAGGACTTTTATAGTCCTTGACTGGAACCAGCTCCAGCCCCCTGAAAACCCCAAATCCCATCTTGCCACTGAAAGTGTAACAGTTCTTCCCCATTTTTCATTAGGCTGCTTTTTAATTATTACAAATTGTCCTAATTTGTTACTGTTTTTTCGGGTTGAGCATTTATTTCTCTATAGCTTTCTTCCCTATCACATTTATTTCAACCGTTGTAGTAAATGTTTTTAACTTGCAAGTTTTAAAATGATTAGGTACTCTTAATGCTGTTTTAAAGTAGAAAATATGCATATTTTTGTATGATAATCAAATGTAAAATACAGTATTTTATTTTTGCTGAACAGTTGTTATATCATGATTATTGTGCCACAGTTTATCGTGCATAATATGAACAACAACTATCCTAGCATTAAGTCCTGGCCCCTGCAGAGCCACCGGCCCCGTTGCTGGCCGAGGATGTGGGGACACGGTCTGAGGGCAGCACCGGACATGGATGCCCAGCTTCTGCTGACAGGGCCACGCGGGCAGACTCTCGGATCGGACTTCAAGGTGTAAAGTGTCTTACTGTTGTTCGTGATGGAAACCAACTTTAAAACCAAAAGTGTCTAACTTTATTTAAGAAAGTATATTAATTTGTGCTAACAGAGGGTGAAAACTGTTCAACACGTACTTCAACAAACTCTTCTTGCTATAGCAGTAACCTCAAGTAGCTGAAACTTGATTTTGAAAGAAAATGAAAACCTTTGTGCCTAAAATTGATTGTGACTTGCATTAAAGTAGGATGGGCAGGAATGTGAGAGATTCTGTTTTCCAGCAGTGATGAATGTGAAGGAAGTGCTGAGTGCTAATAAAATGTCCATAGAAATGGTTGCCTTTGTTATTGATGTGAGAGGTGGGATGTTCTCTTCTAGCTGTGCTTGTGTCTCATCCCTGCTGCTCTGCCTGCTCTAAACCTCAGTTCACAACTGGCTGTCATCACAGCCATGGGGGTTCATGGACCAGGCCCTAACTCGGCCTTGCACTGTATACATTAAAAAGCCGGTGAGTGATATTTCCTTAAGAAGATCAGGGATCAGGTCTGTGGGAGCAGGATCCTGGCCAAGCTGCCCAGGCCTCCCATCCTGACCAGTCCCTTCCTGTGTCCATCCCCTCCCCACCCTGCCCAGGGCTCTGCACACCTTGGAGACACTGCAGGTTGGTTCCACATAACCACAGTAAAGTGAGTGTCATCACAGTCTGCAAGTCATGTGAATTTTCTGGTTTCTGAGTACATGTAAAAGTAATGCTTCCAGTACACTATAGTCTGTTAAACGT EMBV3_26680 ATCGCCGGGTGTCCAAGGGCTCGCGTTCGTGCTTCTCAGGAAAACAGACTTCAAAATCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30163 GACCCGGTCGCCTTCCAGAGGGCCTTGCAGGGTAATAGGAACTCGTGGAATTGCTGAGGG Variant GeneID:100126047|NUDT6:NM_001105650:2_cdna 269^555 3 EMBV3_19319 GeneID:100126047 17 GENE NUDT6 MGC157079 nudix (nucleoside diphosphate linked moiety X)-type motif 6 EMBV3_35512 CTGTGATGACTCAGATTCCTCCTGGTATCCAGCAACTCCATTGCTACTCTGCTCTCAGAT Gene GeneID:618600|MGC134232:NM_001110183:2_cdna Constitutive 2 NULL GeneID:618600 X GENE MGC134232 NULL hypothetical LOC618600 EMBV3_23564 GACACCTTTCTCAATAATGTGGTGATGTATTCTGGAGCTGTGTTGCTGGCTGGGGGTTCC Gene GeneID:783492|LOC783492:XM_002688623:418_cdna Constitutive 0 NULL GeneID:783492 7 GENE LOC783492 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_11073 TACCACAAAATTTCAAGATATTTGTGAGCGCTATCTGCTCTCTGCAAGCACTTAGACAAC Variant GeneID:540274|RNF14:NM_001081540:29_cdna 429^580 3 EMBV3_06995 GeneID:540274 7 GENE RNF14 MGC155209 ring finger protein 14 EMBV3_04775 GCAGGCGATGAATACGAGCTGTACCGGGTGGTCTTCGACATCACCTTCTTTTTCTTCGTC Gene GeneID:100139857|LOC100139857:XM_002694972:136_cdna Constitutive 0 NULL GeneID:100139857 18 GENE LOC100139857 NULL similar to ryanodine receptor EMBV3_11704 TGAGAGGCTGAGACGTCATCCCCTGAGATAACTTTTCCTCTTCAACTCCCACTCCCAATT Gene GeneID:513843|MLF2:NM_001034456:40_cdna Constitutive 0 NULL GeneID:513843 5 GENE MLF2 MGC129121 myeloid leukemia factor 2 EMBV3_18842 TTGGTGATGACCTGAAGGAATTTTCCACCCAAAGAGCACCATGCAGGCAAGCCCAGACTG Gene BVT0102_076449 - 0 NULL GK000013.2:34807032-34922198 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19558 CTAGTCATGCAGAACATTCAGAGCAATACCGTGAGCGTGTAAAAACTGTCTGCGAGTGAC Gene BVT0101_069874 + 0 NULL GK000004.2:94949980-94959110 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184915 TCONS_00184916 TCONS_00184912 TCONS_00184913 TCONS_00184914 1 XLOC_111457 Coding TCONS_00184915 XLOC_111457 Coding Coding CEP41 4:94956408-95006794 = TSS137584 3909 1 TCONS_00184915_2 373 11 0.922635705070954 0.000812532523637108 0.000250587566164575 0.000187651416064708 1.45163149003535e-08 0.000258580977966878 7.84270665378009e-05 0.000264109496036153 0.000121190741744884 0.000124778243145043 5.20479817193911e-06 3.10161834658213e-09 7.40785278412309e-06 4.54697920558011e-07 6.42368901735103e-05 3.08495809365063e-06 0.000398796870377109 2.46501929971451e-09 0.000131394627315882 3.09139258376814e-10 3.22284531495819e-09 4.84236534942424e-05 1.71664592891732e-07 2.1905260220833e-10 5.70908310887942e-05 1.07205902978446e-08 1.91187200469187e-07 0.000485599436463034 2.08919505838219e-05 5.82294078154344e-07 7.95454114999416e-43 XM_005205679.1 CEP41 PREDICTED: Bos taurus centrosomal protein 41kDa (CEP41), transcript 0.0 6017 100.00 0.853159375799437 NM_018718.2 CEP41 Homo sapiens centrosomal protein 41kDa (CEP41), transcript variant 0.0 3651 80.97 0.994371962138654 TCONS_00184915_2 sp|F1MUG2|CEP41_BOVIN CEP41_BOVIN Centrosomal protein of 41 kDa; 0.0 772 100.00 0.997319034852547 1 coding 0 0 0 0 -0.0542207439290478 0.719569549608856 0.00922639986528105 0.857549567631974 GTGAGGCTAGAACCCCGGGCGTGGTCGGTTGGAGCAAATATGTCTGTCCGGAGGCACATTGGGAATCCTGAGTATCTGACCAGAAGGATACCACAAAACCCAAGGTATCAGCATGTCAAGTCAAGACTAGACACTGGTAACAGTATGACTAAATACATTGAGAAGCTAGAAGAGATCAAAAAAAATTATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTAACAACTTTTGCCCAGCTGGTCATCCAGGTTGCGTCCCTATCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAAGGCTAGAAGACAATGATTCTGCAACTTCAGAGCCTGATGCTGAAATCACTGCCAAGACCAACGGGAATGGGAGCCCTGGGGAGCAGTCGCCAAGCCCCGTGCAGTTCATAAACAGTGAGGGAGCCGGGGACTTTAGCCGCTCAACTCTTCAGAGCGTCATCAGTGGTGTTGGGGAACTGGATCTAGACAAAGGGCTTGTGAAGAAAACAGAGCCCAATACCAAAGACAAACCTTATCCCGACTGCCCTTTCCTGCTGCTAGATGTACGAGATAGAGACTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATGAACCCTTACTCAAATGATATTCTTGAGTATAAAAATGCCCACGGCAAGATCATCATCCTGTATGACGACGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGCGAGCGGGGATTTGAGAACCTCTTCATGCTTTCTGGAGGTCTAAAAGTCTTAGCTCAGAAATTCCCAGAAGGACTGATTACAGGTTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGGTTCTGCCCGAAAACGATCCAGTCCCAAAGTGCCGCCCCTACCAGCTGAAAATAAATGGAGATTTACCCCGGAAGACCTAAAGAAGATAGAATATTACCTGGAAGAGGACCAGGGTCCTGCAGACAATCCTAGCCGGCTGAGCCAAGCTAACGCTTCTGGAAGAGATGCCAAGGTTCCAGGCACCCGCAGCGGTCAGAACCTGCCTGCCGGGGGCCCTGCCAGCCACCAGAATCCCCGCTCACTGGGCAGTGGCCACCTGCAAGGCAAACCCTGGAAGTAAAGGACCTTGTCTGCCTTAGTCAAATAAATGTTTTCTCTCCTTTTGGAACCCCGAGCAGTTCCCAAGTTGGTCATTTCAGAAACTGCTGCAAAGACCTCAGCATGTGTGCCAGGCCCTCTTCCTATCTCCAACTCCTTTCCCACATCCAGCTTGGGAAGGATTTTTACAAAAACCAGAGGCATGACAGGCTCTAGTGTCCTCCCTGTTGTTTACAGAATATTTAAGTCTCTGAAACTGAGTAGGAAAAAAGTCTTAATTTTTTTAGGCTTTCATTTTTTAAAAAATAAGGTCGAGTTTGTTTTGGTCTGTGTCCTGCATTGTTTTGTAACTACTTCAGGCACATCTGTGTGTCCTTCCCAGCCAGTTCTTTTTCACTCAGTGTTCTTGGTTTCACGAAGGTTCTCTAGGTAGGCTTTGCAGCCTGAGAAGCTGCCCCTGGGGGTGCAGATGATTCAGAGCCGCCACCAGGGTCTCCATCAGGTGTGGACCCGCTGGCTGAGGAGCTTTTTGCCCAGCACCCACCCGATGCACGTTCTGTCTTGAGTTTGGAAGCCGATACCTGTAAGCATTACTGAGTTAAGACTTAGTAGCCGCTCTCACATGTGTGCGAAGCTCCCCCTCACGAGATGTTCTGGGGCCAGCACAGGTGATGATGTGTGCTCAGCCACCCTCATGGGAAAGCCCTATCCACTGTACAGGGCTGGGTTGAGAGCCATTCATTGAAGCCCCCTGGAGTCGCCCCTCATTTGTGGTTGGTTTATTAGTTGTAAATTTCCATTATCCAGCTCAGGCATATTCATATTAGATGGGTAGAAATCATGGCCCCTTGAAAACACTGGCTTTGGTTGGGTCACCACCAGCACACAAGGTGAGGACGACTCCACAGCCCTTTGTCAGAGCTGACAACCCCTGAAATCCTTGCTTAGAAATACAGTATTAGTCTAATTGAGTAATTAGTGCAATTTCCTGCTTACTTTTCATTCTCATGACTGAGCTGTGATTAGGAGGTTGTGATTATAGATTCTTGTTTGGCCAGAATTTTGAATCGGCATTAATTGAATTGCTAGATGACTGACATTCATTCCATTTAATTGGGGGAACAAAAGACCTCAGGTAAGGATGAGGAACTCTGAAATCATCAGGAAAAGGAAAAAGAGGCTTGTTAATTTTTATGGTCTGTGATCTGTAGTTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCCTCTGAAAAGCCAGCTGAAAATTGCCTATCCTTAGGTGGTTATTGCTGCTGGGGAAGATTTGTCTTAACAGGACTCTTTTTCTCACCACCAAAAAAAAGGTATCACAGTATTTCCAGCATGGGAAGCTGTATTTGTAGGAGAAATAAAGGTAATAAATATCTTATAGAGACATATGGAAAAATAACTTTCAGATTCAGCCCAGTTCTATTTTAGTGTGTTTATTCTTCTCTACTTGATTTCCAAAGTGCAACATTTTCCGATGCTTTAGAAATCAAACAAACCAGGGACATTGTTCAGATGTCAGGCCGTGCCCAATTTTCCATAAGATTCAAGAATCTTGTATAAAATTCAGCCAACGTACACAAAGCTTTAATGAGGAGCCTGTCATGTTTCCCCATAAATTTATTGCCTGAGAACTAAGTTCAGCCTTTTGCTAATGCCAAAATGCTCTGGCTTTTTATTTTCTTTACAGCATAGATTTTTTTTAATGCAAATTTTTCCACATTCAACTTTCCCCTAGCATGGACAAGATTTTCAGCCATTTTGGACACATATACATTTTTAAGAAATTTTTTTTCTCTGTGACAGAGTTCTGTTTATTCCATTTTCAAGTCGACTAGTCAGGAGTCTAGATTTCCCCCACTGGATTCAGTTTTACAAGTGAGTGGTAGCCCCTTTTGTTCCTATTCTGCATTCCCATCACCACACAACACTAGAGCGTTTGAAATGGCTGTGTGTGTGTGTGCACAGTCGGTGTAGCCGATCCTATTAGAGTTGCTGTGCGTTTACTGGAGAGACCTGGCAGGTTGACTGTACTGACGTGTGTCTCTCCATAGTGCTTTGCCTGTTGGTAGGGGTTTTATATAACTGCTCCTCAAAGACCTGCTCTCATTCTGTACTTTTTGTGTTAAGTGTCACTCGCAGACAGTTTTTACACGCTCACGGTATTGCTCTGAATGTTCTGCATGACTAGTTTCTTCATTAGATTAACTGACATGTATTATTTAAGTGATCTGTGATACTCTGTGCAATTATGAATGTTGACGATTAAAGTACATAGTTGTTAATTTGTTGTTTGCTATTAATATGCTGAAGTCTGCCAACTTCTCTCTCCCTCTCTGTTGAGATGATCTGTGGGGAGTCACATGAGCCTGGGGTGATTGGAAAGTGTACTTCTTTTTGCTGTATCTCCCAGGAACGCCTATTTTCTTTGTATAAATGAATCAGGAAATCATTCCAGTTAGGGCAGGAGACCTTAGCTCTCCAGTTAGAAGGTCTGGGTTTCTCTCCATGCCCAGCAGGGACTGATGGCCACCTTAAACACAATACCATGGGACTCTCATCAGTGTTGCAGAGGCTGGCAAGCTGCTCTTGCCTGGGAACTTAGGACCCCCTGGATGGAAAATGCTTCCTCGAAGTACAGCTACTCCTCTCTCTGAGCAACAGTGATGGTCAAAGTCTAACTAATACATTCAGTACTCTAAAGAAGGAAAGGAGGGGAGGAAGG EMBV3_30884 ACACTCATCGCCTCTACCCTGAGTGTGCCCCTAACCAACATGCTTACAGGTATACAGATG Gene GeneID:515301|CDC6:XM_002695965:291_cdna Constitutive 1 NULL GeneID:515301 19 GENE CDC6 NULL cell division cycle 6 homolog (S. cerevisiae) EMBV3_01190 TGCCGGTGGTTCGGCAGCACAAGAAACAGAGTGTGAAGGAAGCATGTTCAAATGGCTCAT Gene BVV0101_031975 - 1 EMBV3_14119 GK000015.2:79360604-79377347 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05015 CAGCCTGACAACATTGCTCACATGAAGGCCAAAGGAGCAGCTGTGGAAGTGAATATAAAC Gene GeneID:511743|UGT2A3:NM_001098944:29_cdna UTR3_Alt 2 NULL GeneID:511743 6 GENE UGT2A3 MGC139210 UDP glucuronosyltransferase 2 family, polypeptide A3 EMBV3_41870 CATTGGTACTCCACGTCTCCCCTCCTTTAAATTTGTCCGTAACACTTAACATGATCTGAC Gene BVT0102_258793 - 1 EMBV3_06012 GK000011.2:43527754-43540755 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02553 GTCATTCCAAAATGGAAAGCCACCAAAATCACAGAGCTGGCCTTGTGGACCCCGACCCTC Gene GeneID:514556|RSPH1:NM_001038105:35_cdna Constitutive 0 NULL GeneID:514556 1 GENE RSPH1 MGC134494 TSGA2 radial spoke head 1 homolog (Chlamydomonas) EMBV3_29738 TATGCTAAGTTGCTTCAGTCGTGTCCGACTCTGCGTGACCCCATAGAAGGCAGCCACCAG Gene BVV0102_224579 + 0 NULL GK000007.2:88148994-88267707 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136773 TCONS_00166603 2 XLOC_082984 XLOC_101440 NonCoding TCONS_00136773 XLOC_082984 NonCoding NonCoding - 23:23784216-23784791 - TSS102063 575 1 TCONS_00136773_1 57 0.436521739130435 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000298565750033699 0 4.36363551468765e-05 0 0 0 0.000546333162362908 0.000255278338732579 0.000116623463789563 0 0 0 0.000417616809026918 1.6885600032575e-05 0 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 3e-106 389 92.94 0.462608695652174 0 noncoding ATATTTAATTAAGCAATCAAGGATTGTGGATTCCAGTACAGTAATTCAAGTTAAAAATTTTACATTTCCATATAAACTCTCTTCTTGTGCAGAAAATAGTGTGGCATTATTTTTAAATTCTAAATATAGTGCCCTCAGGGCCTCAGATCTCAGGGCCCAACTTTTGCTAGGTAAGAAATGTTACAGTTCTTTTGGAAAATGAATGCACTATTTAGCCCAATACTTGACTTAATTTTCAGATATTAAATGCAAAACTGTATCTAAACTGGGTTCTATCTTTTAATTCAAAGCATTTGTTTATGCGACATCAGTTGTGTTCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCAACTCTGTGTGACCCCATAGAAGGCAGCCACCAGGCTCCCCTGTCCCTGGGACTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTCAGTTGTGTCCGACTCTTAGCCACCCCATGGACCGCAGACTACCAGGCTCCCCCGTCCATGGGATTTTCCAAGCAAAGTACTGGAGTGG TCONS_00134406 TCONS_00134407 . 3' 8329 TCONS_00134406 TCONS_00134407 . 3' 8903 EMBV3_38625 CCTCAACTATGAGACGGTGGAGCAGAAGAAGGCCTACGAAATGTCTGAGTTGCTCGGTGA Gene GeneID:789132|ACCN3:XM_002687047:150_cdna Constitutive 0 NULL GeneID:789132 4 GENE ACCN3 NULL amiloride-sensitive cation channel 3 EMBV3_03973 CCAGCAGAACTCACCTGTGTTGGAAAAGCCTGGACGGAAGAGAAAGTGGGCTGAACAAAA Gene GeneID:522863|NMNAT1:NM_001075834:79_cdna UTR3_Alt 2 NULL GeneID:522863 16 GENE NMNAT1 MGC139127 nicotinamide nucleotide adenylyltransferase 1 EMBV3_20180 GAGGCTCATGCACCTGTATGCGGTATGCGTGGACTGCCTGGAAGGTGTTCACAAGATCAT Gene GeneID:788673|HECA:XM_002690282:43_cdna UTR3_Alt 2 NULL GeneID:788673 9 GENE HECA NULL headcase homolog (Drosophila) EMBV3_31857 GTGTTACCCTCCCCACTACCCCCGCTACTCAAACACAGAGCATTGAAATAAGCGTTACAC Gene BVT0102_053283 + 0 NULL GK000019.2:41177894-41185974 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093856 TCONS_00093859 TCONS_00093854 TCONS_00093857 TCONS_00093861 TCONS_00093855 TCONS_00093860 TCONS_00093853 1 XLOC_057274 Coding TCONS_00093853 XLOC_057274 Coding Coding WIPF2 19:41141703-41182721 j TSS70319 6656 1 TCONS_00093853_4 439 8 0.837920862081576 0.00172275983930084 9.64251449061779e-05 0.000333179305654793 0.00290085429950096 0.00211487123889609 9.27957138499485e-05 8.88742564063613e-05 0.000575788078514649 0.000331342521760306 0.00178672223251585 0.00103887195905954 0.000180546329994551 0.000526127497982368 0.000738427624754685 0.00169637098578814 0.00283166765460473 5.67420674061261e-07 8.4819234549943e-07 0.00150808180590522 0.00308685433395205 0.000468494679166626 1.51489517066921e-07 1.47786387197938e-06 0.00017164172518111 0.00510334589728193 0.00451853948561101 0.003253853221027 1.06917270653643e-10 0.000492372498343493 0.00101358863784457 XM_005220758.1 WIPF2 PREDICTED: Bos taurus WAS/WASL interacting protein family, member 2 (WIPF2), transcript variant X3, mRNA. 0.0 1.136e+04 100.00 0.946063701923077 NM_133264.4 WIPF2 Homo sapiens WAS/WASL interacting protein family, member 2 (WIPF2), 0.0 3050 81.96 0.459134615384615 TCONS_00093853_4 sp|Q6PEV3|WIPF2_MOUSE WIPF2_MOUSE WAS/WASL-interacting protein family member 2; 0.0 573 90.78 0.958997722095672 1 coding 1 0 1 1 0.0729328987692454 0.629331141428916 -0.00451670997804659 0.940324659531282 CCTGCTCCTTTCTCCCCCTCCTCCATTTTGTTCGCGGACGCTGGGGACGGTGGGAGCAGATCCATTTCCGGGTTGGCAAAAGGGGCGGCGGCGGCGAGAAGGGGAGCTTGCCGCGGGGCAAGCAGGACTGGACGGAGCCAGAGCCGAGGTGGCGGAGGAGTAGCTCTTGGAGCCGCTGCGGCCAGGTATATGAGTGACCTAAAGCTGCAGATTAAAACGGAGAGAGAGCAGTGCCAACTGCACGCAGGGCAAGGATGCCAATTCCTCCTCCTCCTCCTCCACCCCCCGGTCCTCCTCCTCCTCCCACTTTTCATCAGGCAAACACCGAGCCACCTAAGCTGAGTAGAGATGAGCAGCGGGGTCGAGGCGCCCTCTTACAGGACATCTGCAAGGGCACTAAGCTGAAGAAGGTGACCAACGTTAACGATCGGAGCGCTCCCATCCTCGAGAAGCCCAAAGGGAGCAGTGGTGGTTACGGTTCTGGAGCAGCTGCCCTGCAGGCCAAGGGAGGCCTCTTCCAAGGAGGAGTGCCAAAGCTGCGCCCTGTGGGAGCCAAGGACAGTTCAGAGAACCTGGCTGGTAAGCCAGTGCTCCAAGTCCCCAGTTCCCGAGCTGCTGCCCCGAGGCCTCCAGGGACCACAGCCATCGGGCGTCCTCAAGATGACACAGACAGCAGCCGGGCCTCACTCCCAGAGCTGCCCCGGACGCAGAGACCCTCGTTACCGGACCTCTCTCGGCCCAATCCCACCAGCAGTACCGGGATGAAGCACAGCTCCTCTGCCCCTCCTCCACCTCCCCCGGGGAGGCGTGCCAACGCCCCCCCCACGCCCCTGCCTATGCACAGCAACAAAGCCGCGGCCTACAACAGAGAGAAACCCCTGCCGCCCACGCCTGGACAGAGGCTTCACCCGGGTCGAGAGGGACCTTCTGCTCCACCCCCAGTCAAGCCGCCTCCTTCCCCTGTGAATGTCAGATCGGGACCAAGTGGCCAGTCTCTGGCTCCTCCTCCGCCGCCTTACCGCCAGCCTCCTGGGGTCCCCAACGGACCCTCCAGCCCCACGAATGAGTCAGCCCCCGAGCTGCCACAGAGACACAATTCTTTGCATAGGAAGACTCCAGGGCCTGCCAGAGGCCTGGCGCCTCCTCCGCCCACCTCAGCCTCCCCCTCTTCACAGAGTAATAGGCCACCTCCCCCAACCCGTGACCCTCCCAGCCGGGGAGCAGCTCCTCCACCCCCACCACCAATGATCCGAAATGGTGCCAGGGATGCCCCCCCTCCCCCACCACCATACCGAGTGCATGGGTCAGAACCCCTGAGCCGAGGAAAGCCCCCACCTCCGCCCTCAAGAACGCCAGCCGGGCCTCCTCCACCACCGCCGCCCCTGAGGAATGGCCACAGAGATTCCATCACCACTGTCCGATCTTTCTTGGATGATTTTGAGTCAAAGTATTCTTTCCATCCAGTCGAAGACTTTCCTGCTCCGGAAGAGTATAAACACTTTCAGAGAATATATCCCAGCAAAACAAACCGAGCTGCCCGTGGAGCCCCACCTCAGCCCCCCATTCTCAGGTGAAGCCTGGCTTGGTCCTGCTCCTCAGGAAAAGGATGGACCCTCTCCTCTTCTCAGATGGTCCCTTCCATTCCCCTGAAATCTGCATGACAGCTCCTGATGTGTTTCTCCAGTGCAACCAACCTCTAGACTCCAAGCGTCCTCCCAACTCACCTCCATCTGTGTATGCATCTCATCTCTGGACTTGGTGACGGACTGTCTGTATTGACAGTAGGGCCTCAAACCCTGCATCCATCCCTCTAGCAAGCCCTGCTGGCCAGATGAGGAAGCAGCTTCCATGTCTCCTGCTTTCCTCTGGGGAAAGGTGCCTTGTTGTGATGAATGAACTCATTGTTGGGGTAGGGTGGGAATGGTCCTCCCACCTTCTCCTACCCACTGTAGTGGGGTGGGGAGAGAGGAACTTGATGGCTACATTATATTTCTTCATTTTAGGAAGCTGGTATGGCCAGGGCTTCCAGGAGTGGGCATTTTTAGTGAAACAGGAAAGGAGTTTGCAGAGAAATGATCTGTTTTAAAGGTCACGTTTGGAGCATAGGCAAGGAAATGGATCTGCTCTATTTTTAGGGGTATTTTGGTTTTGCTGTAACCCCACCCCACACCCACACCCAGAAATAGGCTGGATATAAACACTAAATACTAACCAGTTGAACTAAACATCAGTGAAAAGAGAAGGTGAAATAAACTGGGCATCCTTTCAGAACTAGTCAGTTCCTCTGCAGCACAGGGACCAGGGGCCATGGTGGGAGCACTCTGGGACTCCCTGCTCCACTTCCGCAGGTGCTGAGGCTGAGGGATGTTGTCGTTCTCTCACCACCTTATCCCCTCAAGAGAAAAGTCCCTTTCATTCATTCATTATGGATTCTCAAATCCCTAAAACCTCTAGTGAGAGATAGGAAAATAGGACCTTGGCCTTGGCCTTAACCTTGACCTTGAGGCTGCCTCAGTCTTTTACTGCCTGGCTCCAGAAGCCCCTGGCCCTTTCAGTCCTGTTCAGAAACTGCAGCCCCCAGGATGACAAAGGAGGGAAGGGTGAAGCACCTTGTGGAAAGGTCCAGCTCTCTGGGCTGTGAAGACTTTGAACTAAGGCCCACCGGCTCTGAAATTCATAGCCCAGCTGACTGAGCAGGCTCTTCCCATTCCCTTCCCCATTTAGCCGCAAGCCTGCATAGGTTAACATTTCTGAGTAGAGACAGGTGAGGAAGCTTCTGGGGGAGTCAAAGATTCCTCTGTGCCAAGAAGCACCATGACTTTGGTGAGGTGTGCTTCGATCCAGTTGATCTTCTGTGGCAGCCAGCAGTGTTGTTTCATCTTCCAAGTCCTAGTTGAAGAGCCCAGAGAAAATGGAGGTTCCCAATCTAGGTAGGACCTGAGCTTGGCTCATGGTACAGGGACTTGCCCTTCTCCAACAGCAGAATGGAGCTCCACATCCAGCTGGTGTGGTTTGCTTACGCTCTTGAGTGCAGAGGCTACTCAGAGCTTAGAGTGAGAGCAGAGGAACCATGCTATTGTTTGGAACGAATGGGGAAAAGTCCACGAAGACTTTTCACCAGGTACGTCACAGGCTTAAACTGTCCTAGGGACTTTCCAGTCTATTGAATCACAAACTAAGGGTCTTTTCATGGTGCCCAGTGAAACCCAGGTCTTCCCACTGCTAGATGAGAGAGCTTGTAACTTGGGTTACTTGTCTGGGGTCTGCTATCCTTTGCCATCCCCTGGACCATACTGACTGTTGAGGCAAACCGCAACACACTTTTTCTAATCGTTCTTTTATTTATAATTCTTATTTTCACATCTGTTAGCAGTTACCTCTCAGCAGTATCCCTGGCATCCTGAAGCCAGAGGAGCTGAGAGAGGGGATGCTAGTGGAGGGCAAAGGAGAAAGTGCAAGACTTGACACTGCAGCAGAGTTCCAGGGTAGACACTGACCGGTTACTGCACTCGGACTGTGAAGTCTTCCCATTTGTTTTTGAAATGGGAGTTGATGCCTTTTGTATAATGTTATCAAAGTGTTACCTTCCCCACTACCCCCGCTACTCAAACGCAGAGCATTGAAATAAGCATTACACGTAAAAGCCAAACCCCAGGTTTTCATTGGGGCTTCTTCGTCCTCCCCCGTGCCCTGCTGCCCCCCATATTCCCCAGAATTTGGACTGTGTCATGTGGGTATGGATTGTACTTTCAGTTTCTTGGCCTCATGGGAAAAGGCCTGGGACTAGATCTAGTCAGCTGGATTTTCTTCCGCAGAGCATGTTGATGACACAGTACCTATTTAAATGTCTTTGCCTTATACCTTATTTGGTTCCTTTGTTAATAACAGATTTATTATCATGTATATTTACTATTGAAGAATGGGAATGTGAGCCTCATAGTTACTGATCTATTTTGTACGCTGTAAAAAGCTTGTAATATAGGTTTGAGGTGGGCTGGCTATAAGAGCACTAAAACTTCTCACCTTTTAAACTGCTCTTTTTATCTGCTTGTGGGAATGTCGTCTCTTCAGTGGAAGATTGGGTGGTCTCATGTTGAGGCTGTTGCCCAGTCCCATTAACTCCCTTATTCCTTCCTGGAAGGAAGAGACATTGCCCAGCTAAGCATCAGGAAGCTGTGCTAAAAGCCCTCATGTGGGTTTGGTTTTATGCTGTTTTTCTCAAGTGGGAAAAACTTAATAGTTGTTTCTTACCGCCCTTTCTGGGAAACAGGCCAGTGGCCTCCAGGTTTTTCAATGAGCTCGATGTCCCCGTGTCCCTCATCTCTGGTCCCCAGACCTGGATCACAGCACTTTAATATTCCAGGTTTTCTCTCTGGTGGGGCTTTCCTCCAGCCACAGCGCCCCCAGTAGTTTCACCGCCTGGGCCTGCTGAGCGAGAGCACTTCAGGTTTTCCCACCAACAGATGGGAGGCTCTGGCCTCCAGAAAGTATACCAGCTCTCTCAGCTGGCGGAGGCGAGGAGACTGGCCACTGCACTGGGGGCATCCCCTCACCCCACAGCTTCCCAGCTTGAAACCCAGACTCACCTCCAGGGAGAGGTGAGAGAAAATTGTAAATAGACTTGCTACAGAGCAACTCAGGGTTGGGGTGTGTTTTAATTCTCCTGATCACTTGAAATAATCTGTAGGCTGCATGCTTATGGGAGTGGGGGAGGAGTGTGACTCCAGGGTCGTTCCCTTCTGCAAAGCTCTGGGGGTGGAGTAAAGGGCGGCTGAGGCCTTTTGATGGCACTACACTGAGCTGTCTGTTCTTCTGGAAACCCAACCTACAATGAACTACAGATCAGATTCCTGACATTCCAGTTGTAGGCTTTCTTTCCCTGTTGAATCTCAGTCCCCAGCTCCACGTGGTCATGGTGGTTCTCTGGGCGCCACCCTAACTTAGGGAATGGGAGGCATTACGACTCTGCCTTCAGGACTCATCTCTTAAAAGCAGAATAAAGCAAAACGACAACCACCTTCAAAACACTTACAAAAACAAAATAAAGGATAACTAACCGAAGGAAGGGTTTGGTTCCATTCAACTCCACATTCATTGTGCCTTTACTTGTGTTAGATTTCTGTGCTTTCTTCCTCTGTCCCTCTTTGAAGCAATTAAATCTTCCTTGATAAACTGCTGTTTCCTTCTTTCTACTCTTGTTTCTGACAAGTGAGTGGGTTCCCTCTCTTAACTGTCTTGAACCTCATTCCACTGGTGGCAGAGGGGCTGAGCCTTCTCTTCTCGTGTCTAACCTTTGTCTTTTCCCATGGCAACCAGCACGGGAGCCCTCATCAACACTGAATACAAGACTAGAGTGACGTGTGTGAAGAGTGTGTGTATGTATGTGCGTGTCCATCTTGGCATGTTGATCAGTTTCTCTCTTTTTAAAAAATAATTTATTGTATGATTTATTTTGGCGGCGTTTCTGATTACAGTACTCCCTCCCCCCACTTAGCATTGATTCCACTCCCCCCCCAAATGTGTAATCTGGTCTCAGGTTGGATTCTTTGGTACATTTCTTTCTTCTGGATGCCGTGCAGTTTAATTAAACCTTGCTTAAAAACAAACACAAAAACCCTGCAAACTGTGTACTCTTGTCTGGGATACTTACTGCCACAAGTGGTGGCAGAGAGTGGGAAGAAGTCTGCTGCTTTGGGGGTGTCGTGGTTTGACTCCAGGTCCCCTTGAGCAGTAGAAACACTCACTTGGACATAAGCATCTGCAGCTTCCTGAGAATTTTCTCTCCTCCCCTCCTGCTGTGTTTGGAAACTCACAGTTCTACTTCGCCAAGCTTACCGGGTGATTCTGAGAGTTGGTCATTATTTGTATTTGCCACCTAACTCCCCTTGGCCCATGGTTTCAGGGAGCCCAAGGAGATCCCCCAGGCCTCATCTCTATCCCTGATGGTTCTTCCGCCTGTACGAATGGTAGATTCTCACAGTGAGGTGTGAAGAAAAGGTGAGGACAGAACACAGACTGTGTGCGTCGGTTTTTTATGTGGATGTTGGCGTTTCTCCTTCACTCCTTTTCAAGTTGAAATCTTAGCTGACTTCCTTGAACTTTGACTTCAGGTGTCGAAATTGAACCAGACAGTCTCGGCTTACTGTGGTCAGCTGACATAATCACCATAGATTTAATGAGCTTAACCTGTACTTTCATCACTAGCAGAGGTCTTGGAATTATTTCCTGGACTGATTCATAACGGGTGTGTGGATGAGTCACTCGCAGTTTTGATATAAAAACCTATGGGGGGAGGGAGTGAGGGGGGAAAAAGGGCCTCCTTTCATTTTCATCCATATTTGCCAGATAGGCCGAATTCTTGATTCTTTGATTCATCATTGTTATTAATATGATCAATAAACTACCTATTTATTGATGTAATTGTTCCTCCTGTGCCTTTGAATAGCTCTCAAATGGAGGTTGCCTAAATGACCCTTAACTTCCTAACTTCCTATCAGCTTTCTCTGTCCTTTTGGGATGGTATTGCTAGTCACACCCACCAGTGCACACAAAGACATGTGCACAGACTCACAAAAGGATGCCAGACAGGTTCTTCCTGTGTGATTTCATTCCTTCCCCCATGATACTGTGTGTGGATCAGCAGGTGATAAGGACGC EMBV3_13740 TTGGTCTTGCTTGGGGCTTTCCAGGGGATGCTGTCGGTTCTAAGACAACACCAGAATGAA Gene BVT0102_181669 + 0 NULL GK000005.2:29964086-29968851 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194491 1 XLOC_117763 Coding TCONS_00194491 XLOC_117763 Coding Coding SMARCD1 5:29967218-30010330 j TSS145122 9607 2 TCONS_00194491_8 526 0.0491308420943062 25 0.777736540558094 0.00322382242292834 0.00150644443681421 0.00171250003864241 0.000985590510726663 0.00117728573207864 0.000362454816578494 0.000511514816691502 0.00124158658226744 0.000838406577259584 0.000265551943624246 0.000100317027830894 0.000131654158694253 0.000722551184916338 0.000438595775066343 0.000937460708317239 0.00196951776656863 0.000902163244148905 0.000609504668719668 0.00137908703403881 0.00195536418333452 0.00065433563237355 0.0013528555966527 0.000387324542560779 0.000534376000106642 0.00141738830827242 0.00176512123498151 0.00125204068966005 0.000199243887526074 0.000283265145982356 0.000307277501331152 XM_005206312.1 ACCN2 PREDICTED: Bos taurus amiloride-sensitive cation channel 2, neuronal (ACCN2), transcript variant X2, mRNA. 0.0 6477 99.92 0.374310398667638 NM_003076.4 SMARCD1 Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 (SMARCD1), transcript 0.0 4594 90.34 0.350785885291975 TCONS_00194491_8 sp|P78348|ASIC1_HUMAN ASIC1_HUMAN Acid-sensing ion channel 1; 0.0 1094 99.43 0.998098859315589 1 coding 1 1 1 1 0.0739188916123435 0.624806574563829 0.0118044320090345 0.850042618979085 ACTGTCTCCGAGAGCTGGAGGGCGCTTCTGCACCTAGAGCAGATGGGGCCATCTGCAAGGGAAGTGTCCGTGGGGAATTTGCCCCATCAACCTCTCAGGGATGAAAATAATACTTACTACTGTTGATGGAACACCTACTGTTTACCAGGAAGACATTTTTTTTCATCCCTGTGGGCATTAGCCAGATTTTATGGTTTGTGGAGAAAAGGAGTCTCAGATGAGTTAAGGAACTTGTCTAGGATCACACAGCACTGGTGTGACCGAGGTGGGATTTGAATTCAGACTGGAGTCAGTTGTCAGCGTGTTCATCTCTCCTTTGACACTGAGAGAATTTGGCCCATGACTCCAGGGCCAGTCCGGGGGCTGAACACAAGAAAAGCCACAGTGGAAGTTTGCTAAAATGTACAAGGATCCATCTCACCTCAAATGAGGAGGAAACAATAGCCGGGGTCTGATATACAGGAGTAAATAACCAAAGCTTTGATCCAGACCTGTGGATTCTGAAGATCTAGATTTCTCAAGACTGACTGGTATATATCACAGATCTCGAGAAGCTGGGAAATCTGGACCCCACCTCTGGAGATTCTGATTTAATTGGTCTAAAGTGGGGCCACAGCAGCAGCATTTGAAAAAGCTACCCAGGTGACTCAGATGTGTAGCCTGGGCTGAGAACCGCTGTCAGATTCTACCCTGATGTGGCTGCACTGGTGGTTTTATTACTCAATTCAAACAGTAATGCTAATAATAAGTTACTACTTATTGAGGATTTACTGAGTACAAGCTAATGTGCTGAGCTCTTTCTATGCATTAGTTCATGTAATTCTCAGAATCTCCTGTGAAATAAATATTATCCCCATCTTACAGATGAGGAAACTGAGCTCAGAGAGGTCAAGGACCTACTCATGCTAATGAATGGCAGAGCCAGGTCTGGGATGTGAGATTGCCCGATTCACACTCTTACTTTCCCCCAAACTCCTCCTGAGGCTGCTCCTTGGCCTCAATCAGTCCTTGCCTGCCTCCACCTCACCTCATCACCTTCCTTCCACCCCCGCTGCTCCCTCAGTAACATCCCAGGTGACTGAAGCAATTTGCAGCCATTTGAAGAAGCTTCCATGTGTCACTCAGCCTGCGAGGGTGGGGAGCTAGGGAAATTACAGATGCTTCAAAATGGCCCACCCCTCCTCCTGAAGTCATCTGGAATTCAGGAATCAGACTCTGCCCAAGATTTCCTCAGATTTCTGCTTGGGGCCCTCCCAGGCTGAAATCCCACTCCCAAATGCCCCTCTTCGTTGATTCTAAGTATCTGGGAGGGTGCTGCCACCCAGTGGCTGCCCGGGCACATGGCAGCTCTCTGGAACAGCCTGGTGCTGCTGGACAGCTCCCCAGTTCAAGAGGAGAATCTAAGATCCTCCCTTCCTCTTGGTAGCACCTTGACCAAGAATCTAGTAACTGGATCCCAGTCTCCCTTCTCCTCAGCCCTAAGCCTACACTCCCTCTTGGGATCTCCAGCGCCCTTCCCTGTAGTTCCATGTGCCCCCTGCCCCCAACCCCTCACAACTTCTCATCCAACTTCTTTTCTCCGTGCCAGCCCCTTCTCATTATACGTTCTCATTCTGACTTAAAGCCCTGGGAACACACCTCTCACCTCCCTCTCCCAGAGCTCCACCAGCCCACAAGTGGAATGAAGGAGGGGCTAGAGATAGAATTCTTGTCCCCCACACTCCCCTCCTCATCATCTGACACCATCAGACCTCAACAGCCTTCGTGCTAAGAGCCCCTAATGAGCATCAGCAAATTAACAACTTCCTTTTGATTGCTCCTACTCTGTTAATTGGATAGGGAGGGCCCCCCAAGGCCTCTTAGAGAGGAGAAAGGAGGAAGAGGAGAGAGATCCCCTCGGCCAGGATGGAACTGAAGGCTGAGGAGGAGGAGGTGGGTGGCCTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAGCTCCACCCTGCATGGCCTGGCCCACATCTTCTCCTACGAGCGGCTGTCTCTGAAGCGGGCGCTCTGGGCCCTCTGCTTCCTGGGCTCCCTGGCTGTGCTGCTGTGTGTGTGCACCGAGCGTGTGCAGTACTACTTCCACTACCACCACGTCACCAAGCTCGATGAGGTGGCTGCCTCCCAGCTCACCTTCCCTGCCGTCACGCTGTGCAACCTCAACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGACCTGTACCATGCCGGGGAGCTGCTGGCCCTGCTCAACAACAGGTATGAGATACCAGACACGCAGATGGCAGATGAAAAGCAGCTGGAGATACTGCAGGACAAGGCCAACTTTCGCAGCTTCAAGCCCAAGCCCTTCAACATGCGCGAGTTTTATGACCGCGCAGGGCACGACATCCGAGACATGCTGCTTTCCTGCCACTTCCGGGGGGAGGTCTGCAGCGCCGAGGACTTCAAGGTGGTCTTCACGCGGTATGGAAAGTGCTACACGTTCAACTCTGGCCGAGATGGGCGCCCACGGCTGAAGACCATGAAGGGTGGGACGGGCAACGGGCTGGAGATCATGCTGGACATTCAGCAGGACGAGTACCTGCCCGTGTGGGGGGAAACCGATGAGACGTCCTTCGAAGCAGGCATCAAAGTGCAGATCCACAGTCAGGATGAACCTCCCTTCATCGACCAGCTGGGCTTTGGCGTAGCCCCAGGGTTCCAGACCTTTGTGGCCTGCCAAGAGCAGCGGCTCATCTACCTGCCCCCGCCCTGGGGCACCTGCAAAGCTGTTACCATGGACTTGGATTTCTTCGACTCCTACAGCATTACCGCCTGCCGCATCGACTGTGAGACGCGCTACCTGGTGGAGAACTGTAACTGCCGCATGGTGCACATGCCAGGGGACGCCCCATACTGCACTCCAGAGCAGTACAAGGAGTGTGCAGATCCTGCTCTGGACTTCCTGGTGGAGAAGGACCAGGAATACTGTGTGTGTGAAATGCCCTGCAACCTGACCCGCTATGGCAAGGAGCTGTCCATGGTCAAGATCCCCAGCAAAGCGTCAGCCAAATACTTGGCCAAGAAGTTCAACAAGTCTGAGCAGTACATAGGGGAAAACATCCTGGTGCTGGACATTTTCTTTGAAGTCCTCAACTATGAGACCATTGAGCAGAAGAAGGCCTATGAGATTGCAGGGCTCCTGGGTGACATTGGAGGCCAAATGGGGCTGTTCATCGGGGCCAGCATCCTCACGGTGCTGGAACTCTTTGACTACGCCTACGAGGTCATAAAACACAAGCTGTGCAGAAGAGGGAAGTGCCAGAAGGAGGCCAAACGGAGCAGCGCGGACAAGGGCGTGGCCCTCAGCCTGGATGACGTCAAAAGACACAACCCGTGCGAGAGCCTCCGGGGCCATCCTGCCGGGATGACGTATGCGGCCAACATCCTACCTCACCATCCGGCCCGAGGCACTTTTGAGGACTTTACCTGCTGAGCCCCGAAGGCCACTGTACCAAAGGCCTAGATGGGGAGGGCTAGGAGAGCAAGGGGGCCCCCAGCTGCCCCCCACATCTGCCCTGGGGACTCACTCCCCTCTCCCAAGGCAGCCCCCCACTCCTGGGCGGTCCTTTCCTCTTGAATGTGGTGAGGAAGGAGTCTGGAACCACAGAGTCCTCTCCCCGCCTCAATCCCTTTCTTTTCTTTTTTTTTTTTAACAAAACTAATCTAAAACAGAAACTTAAAAAGAGAGTATGGGGCAAGTGACCTCAGGCTGCCCCTCTCTGCTCCATGCTGCCTCCCACAGCTCCCAGCCTGAATTCTGTCTGTCCGGCTGTCTGTCATCTGAGTGTCCACCTACATTTTGCTGCCACCAGTCACCAAAGCCCCCTTCCAATGGGGGGTGGAGGGGATCCCTTGGGGTCTGGAGTTTGGCCCTAAACCAGAGAATGTACCTTGAAGGGGAGGGCTAGTAGGGGGGGCTTCCCCAGCCTTAAGAGACCCTCTGAGCCCAGTGGCCCCCCCCCAACCCCAAGTCTCCAGGCAGGAACCCTAGTCCTGTCTGTTCTCCCCCCACCACCTGGTAACCTGTGAAGTCTCTAGGGAGGTGGGGGTGGGGGATCCCCTGAAGAAGTGGAGCTGGGACACGATGTGGCCCTGGTGCTGTAGGCCACATTCTGATAACTGCAAGTTCACCCCCCACCCCAGAGCTGCTGGAGAGAAATCGCAAGAGGCAGCCCTCCTCTGCCGTCCCATAAGAGATCCAGCTGGTTGGCCTCCAGCTCAGGGAGCCGGGCACTGGTGCCTAACCTCACTGGTCCCTCTCCCCCAGGCCCCTGCAGAGGGCCACATCCATAAATTTTCTTATGGAATTCTCCTAAGTCCTCTTCTGAAACATTTGCTTCTCTCAACAACTTCATCTGCATTTTCTATTTCTATACGATACAGACTCTATATTGCTATATCTCTGTATATACTTTCCCCGACTCTGTCTCTATTTCATCCCCTTGTGTCTCTAAGAACAACCCTCTCCACCCCTCCTACAAGTTCCCCTTCTGTGTTTCCACCCCTTCCCTGGTCTCTGAATGCCTTCTCCTGTATAAAGAGTTGGACTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTAAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACATAAAGGAAGCTGTGAATTACAAGCTCTGCCTCTTTCTGGCCTCACCCTGTCCCCCCAGCCTGGGTTTCCTTTGCCTTCCCTGCAGCCTTAACATTCCCTCCCCTGCTCCACCCACCCCACTGTCCTTTGCCTGGCTGACTGCAGCCTCCCCAGGGAAGGGGTTGCTACAGCGAGAGCCCCCACCCATGGGATGGAGATCTGCTCTGCACACTAAGGCAAGAGGGAGCTGTGAGCTGATGACTGCAGCAGAAGCAGCAGGGTGTGGACCGGCAGAGGCCTTCAGTCAGCGGCCTTTGTCTCCTTCTGGATGCCCAGGCCTCTTTGCTCACCTAGTACCCAAGCCCACCCCTTATACTTTTCTGGTGAGGTACCGTTTGATAGTGGAATGAAAGAGACAGGCCTAGAGGGGACATTGAAAGCTCTGCTATTCTGTTCCTCCTTTCCTCCCTTAATGAGAAACCAGCGAGATAGAGGACCTGCCATGCCCCCTCCATCAGGGCCCTCCTCCCAGGCCAGAGCCCTGCCCCTTCCCAGGCCTTCTCTGTCCAGCTGCCTCATAGCCTCCAACCCCAGAACAAGACCTGTGGCAGGTCATCTGTGCATTCGCCTGGAGCTGGAGAGTGAGGCCATAGGATCTTTGGCAACTCTTGGTTCCCAGGAGTTCCTTAGAGATCAAACCTCTCCAGAGGGAAGCAGGAGCAAGGCCAAAGGGTGTGCAGTGGATGGGGAACAGCAGGCAGGGCTATAGGTGACGCATGCCTCTGGTCTAATAAACTGGGTTTTAACCATCTCTTCTTCAATGTCGTTCTTCTCTTATTTGAATAGTATTTAGGCCTTCCCACTAAGTGTCTAGAGCTGATTTTGGCTTGGGGCCACACAATCAGGGGAGGAGTAAGGAGGCGGGAGCAGGGGTGCTCTGGTCCTCCTGGGATGGGACAGGCTGACCATCACACTAGGAATGGTTTGAACCACTGGGCAGGGAAAGAGGAAGAGGTCAAAGGCAACAAAGATCCCCAAAAGAAGTTCTAGCAGAAAGGATTCTTTGGTGAGGAGGAAGGGTCACACTTCGAAATAAGCTTAAAATCTGGTAGCAGTTTAGGTTAAAGGTCAGGGGCAAAGCTGGGTTGAAGTTCCTGTAGTTATTGAGGAACTTTATGGAATGAGCCCCGGACTATGAACCGGAAGATCTGGATCCTAGGTTTCGACTTTACTGCTAACTTGGTTGACTTCACCAAGTTATTTATTGAGTTCACCTCGCCTGTTTGTAAAATGGAATAAACAGTGCGTTCTCTTCAGTGTGCTGGGCTTAGAACCGGAAGAGAAAGGAAAAACGCACTGCGTTTGGAAAGTTAAACGCACTGCGCCAAGATAAAGCATTTACTCCATCACCCTCGCGTAGGGATGGTGCAGTGGTCCCCCTTTCCAGGTCCTTGTCTCCCTCCGTCGGCCTGGGGGCGCCCTTTCGCACGGCTTCTCTATCCCAGAGCTCTTCTCGATGGTTTTCCCTCCCGGATCGTGAAGGCTGGAGGGAGTGGTCACACGCCTTTTCCCCTAGTCGCCCCCCTCTAGCCCACAGTCTCGCTGCCCTGAGCCTCCCGGGCCGGCGGGCCGGCCGGGCGGACAGGAGGGCGCGCGAGGGGCGCGCGGGGGGGGCGGGGGGAGTTCCGGTTCCGGTTCTTTGTGCAGCTGCAGCAGCGGCTCCGGGAAAGATGGCGGCCCGGGCGGGTTTCCAGTCTGTGGCTCCGAGCGGCGGCGCCGGAGCCTCAGGAGGGGCGGGTGCGGCGGCTGCCCTGGGCCCGGGCGGGACACCGGGGCCTCCGGTGCGAATGGGGCCGGCGCCGGGTCAAGGGCTATACCGCTCCCCGATGCCTGGAGCGGCCTATCCGAGACCAGGTATGCTACCAGGCAGCCGAATGACACCTCAGGGACCTTCCATGGGACCCCCTGGCTATGGGGGGAACCCTTCAGTCCGACCTGGCCTGGCCCAGTCAGGGATGGACCAGTCCCGCAAGAGACCTGCGCCTCAGCAGATCCAGCAGGTCCAGCAGCAGGCGGTCCAAAATCGGAACCACAATGCAAAAAAAAAGAAGATGGCTGACAAAATTCTACCTCAAAGGATTCGTGAACTGGTACCAGAATCCCAGGCCTATATGGATCTCTTGGCTTTTGAAAGGAAACTGGACCAGACTATCATGAGGAAACGGCTAGATATCCAGGAGGCCTTGAAACGTCCCATCAAGCAAAAACGGAAGCTGCGAATTTTCATTTCTAACACTTTCAATCCGGCTAAGTCAGATGCCGAGGATGGGGAAGGGACGGTGGCTTCCTGGGAACTTCGGGTAGAAGGACGGCTCCTAGAGGATTCTGCCTTGTCCAAATATGATGCCACCAAACAAAAGAGGAAGTTTTCTTCTTTTTTTAAATCCTTGGTGATCGAACTGGACAAAGACCTGTATGGACCAGACAACCATCTGGTAGAATGGCACAGGACCGCCACTACCCAGGAGACGGACGGCTTCCAGGTGAAACGGCCAGGAGACGTGAATGTGCGGTGCACTGTCCTGCTGATGCTGGACTACCAGCCTCCTCAGTTTAAATTAGACCCTCGTCTGGCTCGGCTCCTGGGCATCCACACCCAGACCCGTCCGGTGATCATTCAAGCACTGTGGCAATATATTAAGACACACAAGCTCCAGGACCCACATGAGCGGGAGTTTGTCATTTGTGACAAGTACCTCCAGCAGATCTTTGAGTCTCAGCGTATGAAGTTCTCAGAGATTCCCCAACGGCTCCATGCCTTGCTTATGCCACCTGAGCCCATTATCATAAATCATGTCATCAGTGTTGACCCGAATGATCAGAAAAAGACAGCTTGTTATGACATTGATGTGGAAGTGGATGATACCTTGAAGACCCAGATGAATTCTTTTCTGCTGTCTACTGCCAGCCAGCAGGAGATTGCTACTCTAGACAACAAGATCCATGAGACAATAGAGACTATCAATCAGCTGAAGACCCAGCGGGAGTTCATGCTGAGCTTTGCCAGAGACCCTCAGGGTTTCATCAATGACTGGCTTCAGTCGCAGTGTCGGGACCTCAAGGTCATGACTGATGTGGTGGGTAACTCAGAGGAGGAGCGCCGAGCAGAGTTCTACTTCCAGCCTTGGGCCCAGGAGGCCGTGTGTCGATATTTCTACTCCAAGGTGCAGCAGAGACGACAAGAATTAGAGCAAGCCCTGGGGATCCGAAATACATAGGGCTTCTCCCACAGCCCTGATTTGGCTGCAACGATTTCTTTATTGGGCCCTGTGCTGCCTGCCTCGTGGCACCTGCCTTGGTCTTGCTTGGGGCTTTCCAGGGGATGCTGTCGGTTCTAAGACAACACCAGAATGAAGAGGGTCTCACGTGACACCGGCTCTCCTCTTCTCCCACCCCATCCCTTCCTATCCCCAGCTTCCCTTTGCCCCACAAAGTTCCCATGTGCCTCTCCCCTCCCCTGGTCTGCATAAGACCTCTAGATAGTATTAGAGAGAGAACCTGTAGTGGTAATCAGTGCATTGAATGGATTGGGCCTAAGGCCAAGTGGTCTTCAAGGGGACCAGCTACACTGATCCTGCCCTTCAGAGACCCAGGAGTTGGGAGCTGTAGCCCCTTCTCCACCACTCAGGCCTGGGGGCACTCTATGAGCTAGTTGATCTTGGCTCTCCTGATAACAGAATCCAGTTTCCTTCCTTCCCTCCACAGGTTTGGAGCAAACTCTCCCTTCACTTGTTGCTCTCTAGCACTAAAGGAACCCTGGCTCTCGGGCTCCACTGAGCCCCAGGTCAGTCCGCAGCCCTCCAGAGGGGCCTGCTGTCTCAGTGCTTCTCTCCTCCCTTACAGGGGGTCCACATCAGTATTAGAGTTTGTTCTAGTAGTATTGCTCCCTCCCAGCACACTCCCTGTAGCTGCTGTTGAGGATTCCCTCCTGTCTGTCCCAACTGAGGGCATTCGGGTGGGGGAATCTTGCCTTTCCGTGTCAGAGCCCCGGGGACCTCACCTAGGGTGCTGTCATTGCCAGCGGAGGCTGTTCCTTTCTGCTGTAGTGTGGAGGTGTGATTCATTCATTCACTCCGCCCTGCCTCCCCCATCCCTTCTTGGAGAAACAGGCCTGCAATCAAACGGGTAAAAGCCCTGGGCCACCCCTGTCTTCCTGTCCCTTGTCTGCCCAGTTGACACCCGCTGGTGACTGCTAGGGCACTGAGGAGTGAAAGCGCCTAGGGCTGGAGAGAGCTCTGACTCGGGTCTGTGACTCTTCCCCTCTCCCTGCCTCACAGGATTGTGACTCCCCAGCCCCTGCCCTCAAAGCTTCAGACCCCTCAGGTAGCAGCAGGACCTTGTTGTGTGATCTTGGCCCCTTGGAACTGAGATGGTTTTGCATCTTTCCAGGAGAGCCTCAAATTCTTCCAGGTTGTATCACCCCCCGAGTTAGCATATCCCAGGCTCGCAGACTCAACACAGCAGGGTGGGAGACAGCTGGGCACAGAGGGGGAATTCCGTTCGGCATGGGCTGTAAACCTGCAGAACTGACAAAGCCCCTGCTTCCCCACCCCCTCCTCAGGCTCCTGCGAGCACATCCCCCAGCCCTGTGTCCCTGCCTGTTCCACGCTGGGTACAGCAGGACTCGCTCCTCATCTTCTTCCACTTATTAATCCCCGCCTCCCTGAAAGGTTCTCCCCACAGTGACACTGGACAACCTCTGTCCCTGAGGCTGGAACCATGAGAAGGAAGCTCAGCACTCCTACAGTGTCCCTGTTGAAGATAACTGTTTTTATTAACTGAATTATTATGTTTTTTTCATGGACCAAAATTTTTTTTGTACTGCCCCCTTATCGATGTCACCCAGTTTTAATAAAAGAATCTTCTGAAGA EMBV3_21894 GAAGAAGGCTTACACCAGTTTCTTCGGGGCACCTCCAGCGTATCCTCTCTTCATGTACCA Gene GeneID:539988|BVES:XM_002690147:27_cdna Constitutive 0 NULL GeneID:539988 9 GENE BVES NULL blood vessel epicardial substance EMBV3_38592 TGCGGGACTGAGAAATCCAGACGCTCTTGTTAGGACTCGGCTTCTCTGCCAAATGACTGT Gene GeneID:515593|MAP1A:XM_002696807:564_cdna Constitutive 0 NULL GeneID:515593 21 GENE MAP1A NULL microtubule-associated protein 1A EMBV3_04149 GCCTTGAGGTTTTGCTCCTAACTATGCCTTGAAAAACCAGCCACTAGCATGATTTCCCCG Gene GeneID:614993|LOC614993:NM_001105438:143_cdna Constitutive 0 NULL GeneID:614993 2 GENE LOC614993 MGC152458 hypothetical protein LOC614993 EMBV3_19153 AGGCTCCAGGCTTCGTGACAGATGGTGCGGGCAACTACAGCGTCAATGGCAATTGCGAAT Gene BVT0102_211759 + 1 EMBV3_37656 GK000018.2:51275005-51293110 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086700 TCONS_00086701 1 XLOC_052222 Coding TCONS_00086700 XLOC_052222 Coding Coding MEGF8 18:51245927-51292639 j TSS64478 10636 1 TCONS_00086700_18 2760 0.0730537796163971 41 0.773179764937595 0.000115092791239445 1.50891160039964e-05 3.56477061567552e-05 6.48277736748276e-05 1.29969431338081e-05 3.26131429145982e-05 5.70076290951246e-05 0 1.37027939878738e-05 8.88649145910751e-06 8.5478290126426e-07 0 1.61097185609782e-06 4.41011187256207e-06 5.14904722022365e-06 0.000206036945406418 7.17602815127214e-05 7.01083031436815e-06 0.000103809800654427 3.51402126639362e-05 1.1334603809683e-06 7.53313292209064e-05 3.44776706894567e-05 0.000105561840897932 7.62126568132796e-05 3.63036361146573e-05 4.1300294149525e-05 1.08113788352156e-05 1.36799550491307e-05 7.9122167162178e-05 XM_002701886.2 MEGF8 PREDICTED: Bos taurus multiple EGF-like-domains 8 (MEGF8), mRNA. 0.0 8785 100.00 0.457878901842798 XM_005258611.1 MEGF8 PREDICTED: Homo sapiens multiple EGF-like-domains 8 (MEGF8), 0.0 7196 90.26 0.495863106430989 TCONS_00086700_18 sp|P60882|MEGF8_MOUSE MEGF8_MOUSE Multiple epidermal growth factor-like domains protein 8; 0.0 3157 95.16 0.636231884057971 0 coding 0 0 0 0 0.00140428831118545 0.992458131481978 -0.00234807875795101 0.958731917952249 CCTCTTTATTTTTTATCCCACAGCGGCTGCTAGGCCCCCTCCCTCTCGTCCTCCCCGCGTTCTTCCCGTGGCCGCTCTCGCCCGAGTGTCCCCTCGTCTCTCTGATCTGGCTCATCCGGCTCGGACGGGAGTCGCGGGTGGGTGAGCAAGCGAGTTCGTCTATGGGGTCCAGGCCTGAGCCCCTGAAGACTGACTCTGCCCCGGGGCAGCCGCTCGCGCCCCGCCCCTGGCTGGAGGGTTCTCTCCCGGAGGACCCTCCGGTCCAGGACGTGCCCGCATCCTTGATGTAGGCCCCCGCCGAACTGTACACCTCTTCGCCCACTGGGGACCCGAGTGGTCTATAAGGTCCGTTTCGGCCTGCAGCGGCCCGCGACTGTAACTGCTGGACATCGTTTATGGGGTCAGCTAGCCTATGGGGGCCCATGTCTACAAGAGACTCCCATGGCCCCTAAGGGTCTGCCCCGACCATAACGACCCCCATTACAGGGTTTTCCATGGGTCTGTAGGGCCCACCCCTCCATCTCCAGAGCCCGGCGACAACGGCTGTCTCAGCGGCTCCTGGACCCCGCTGGTCTACAAGGCCATGTCCCATCCATAGAGGTCGCATTTGCAGGGCTTCAAACGGGGTGGAAGGCCCTCTCCGGGGCTTTACGACCCCTCAGTACGGGAGGAGGCGGCGATGGCCCTGGGTCGGGCTCTGGCTGTGGCGCTGGCTGTATCATTGGCCGTGCTGGGGCCACTGTCTCCTGGAGCCCAGGCAGGGGACTGCAAGGGGCAGCGGCAAGTGCTGCGGGAGGCTCCAGGCTTCGTGACAGATGGTGCGGGCAACTACAGCGTCAATGGCAATTGCGAATGGCTCATCGAGGCCCCGAGCTCCCAGCACCGGATCCTACTGGACTTCCTTTTCCTGGACACAGAATGCACTTATGACTACCTGTTCGTGTATGACGGTGACTCCCCCCGCGGGCCCCTGCTGGCCAGTCTGAGTGGGAGCACACGGCCTCCGCCCATCGAGGCTTCCTCGGGCAAGATGCTGCTGCACCTCTTCAGCGATGCCAACTACAACCTGCTGGGCTTCAACGCCTCCTTCCGCTTCTCCCTGTGCCCGGGTGGCTGCCGCAGCCATGGGCAGTGCCAGCCCCCAGGGGTGTGTGTCTGTGAGCCGGGCTGGGGGGGCCCCGACTGCAGCCTGCAGGAGTGCTCAGCCTACTGCGGCAGCCATGGCACCTGCACCTCGCCCCTGGGACCGTGCCGCTGTGAGCCTGGTTTCCTGGGACGCGCCTGTGACCTGCACCTGTGGGAGAACCAGGGGGCTGGCTGGTGGCACAACGTGAGTGCCGGGGACCCCGCCTTCTCTGCCCGTATCGGGGCAGCCGGGGCCTTCCTGTCCCCACTGGGGCTGCTGGCTGTTTTTGGAGGCCAGGACCTCAACCGCGCGCTGGGGGACCTCGTCCTGTACAACTTCTCTGCCAACACCTGGGAGCGCTGGGACCTGAGCCCTGCCCCGGCTGCCCGTCACTCCCACGTGGCTGTGGCTTGGGCCGGCTCCCTGGTGCTGATGGGCGGTGAGCTGGCTGATGGCACCCTCACCAGCGACATCTGGGCCTTTAGCCCGATGGGTGGCGGCCGCTGGGAGCTTCTGGCACCACCTGCCTCCAGTCCCTCGGGGCCGCCCGGCCTGGCAGGTCATGCAGCAGCCCTGGTGGACAACACGTGGCTCTATGTGTCTGGTGGCCGCACCCAGCACGACCTCTTCTCCTCCGGCCTCTTCCGTTTCCGCCTCGACGGCACCAGTGGGGGCTATTGGGAGCAGGTGATGCCAGCAGGTGGGCGGCCCCCTGCCGCCACCGGCCATTCCATGGTGTTCCATGCCGCCTCCCGTGCCCTGCTGGTTCACGGTGGACACCGGCCCTCCACTGCCCGATTCTCTGTGCGGGTGAACTCCACCGAGCTCTTCCATGTGGATCGGCGCGTGTGGACCACCCTGAAGGGCCGGGAGGGACTTCACGGCCCACGGGAGCGAGCCTTCCACACGGCCAGCGTCCTGGGCAACTACATGCTGGTCTATGGGGGCAACGTGCACACCCACTACCAGGAGGAAAAGTGCTATGAAGACGGCATCTTCTTCTACCACCTGGGCTGCCATCAGTGGGTGTCAGGGGCTGAGCTTGCCCCTCCAGGAACTCCAGAGGGCCGAGCAGCGCCTCCTAGTGGCCGGTACTCACACGTGGCGGCTGTGCTTGGTGGCAGTGTCCTGTTGGTGGCCGGGGGGTACAGTGGCCGGCCTCGTGGGGACTTGATGGCCTACAAAGTGCCCCCCTTTGTGTTCCAGGCGCCTGCTCCAGATTACCACTTGGACTATTGCTCCATGTACACGGACCACAGCGTCTGCTCCCGAGACCCCGAATGCAGTTGGTGTCAGGGGGCCTGCCAAGCCGCCCCACCTCCTGGGACTCCCTCAGGGGCTTGTCCGGCTGCCAGCTGCCTGGGCCTGAGCCGTCTCCTGGGTGACTGCCAGGCCTGCCTGGCGTTCAGCAGCAGTGCGGCTCCCCCCCAGGGGCCCGGTGCCCTGGGCTGGTGCGTGCACAATGAGAGCTGCCTCCCTCGGCCTGGTGGCGGGGCAGCAAGAGCGGGGCCTGGCCTGTCCTACTGTGTGTGGGTTGTCTCGGCCACTGAGGTGCTGCAGCCCTGTGCCCCCGGGACACTCTGTCCCCCGCTTACCCTCACCTTCTCCCCCGACAGCAGCACCCCGTGCACGGCTGCCTCCTGTTTCCTGGACCCCAGTTTCCCATTCCCCAGTCCAGGCATGATAAAAGTTTGTACCTTGAGGGCCAACTCTGATCGATTGGTAGTGGCTGCCAGGATCTGTGTATTGAGAGACTCCATGCACAACCACACTCATGGCTCTGCAGACACTCGTGACAGCTCGGGAAGCGGTCACAGCTCCGGCACCGAGGCTCCGAGTGCACGCTGTGGGGAGGCGGGTGTGAGGCCGCCCGAGCTACCCCCGCCCCGCCCCACCTCCACCCTCCCCTTCCGCGCCCCTGCCGCCCGCCCGCACCTGTCGTCCCAGCCTCGGCAGCCCCCGTGCGGGTACCGGGCCAGCGGAGCTCACTGGCTGCAGAGTGGGGGGCACTCTTCCGGACTCTTCAGGGCGCCCCGACCCCGGCCGCGCCGGCTGCACGCCGCGTCCCCCTTGCGGCTGCCTGGTGCGCACCTGGGTGCAGGCGTGGCAGTCGCGATGCTCCTCGCAGAGCGGGCAGAGGGCAGGCACCAGCACGAGCAGGGACCCGCCGGCCCCAGCGTCCCTACAGTGGGCGCCGCTCTGGCGCAGGTGGCAGGTGGCGCTGGCCAGGCACCAGCCGCAGCCCTGGTCTGCCAGGCAGCCCAGGCAGGAGGAGTAGGAGGCGCAGGCCGACGAGCGGTAGGGCTCCAGGAAGAAGAAGGAGATCTCCTGGGGGTGAGGGTGTCAGAGGAGGGTGAGGGCTCCATGCTCCAGGTCAAGCCTGCTGAGTGTCCCAGGCATTCTTACCATGTTTTCTGTGTCCGGGCCCCGGGCCATCCGGGCCAGCACATGCAGGCGCTGGGCCCGGGCCCACACGGCCACATCCTCAGCCCCAGACCCCCCAGGGCCTCCCGGCAGCAGCGGGTGGATGAAGCCACGGCTGGGAGGCGTTGGGTGGCTGCTGGAAGTTGCCTCCAAGGGGACTTCTCAGGGCCTCTGAGTGGGGGGAACTGCTCCCTGTGGGTCGGGGAGGGCCTGGGGCTGTCTGTGGCCCTCCCCGCCCGCTGGGCGTATGCCCGCTGTCCGGATGTAGACGAGTGCCGCCTGGGCCTGGCGCGGTGCCACCTGCGGGCGACCTGCCTGAACACACCCCTCAGCTACGAGTGTCACTGCCAGAGGGGCTACCAGGGCGATGGCGTCACTTACTGCAACCGCACGTGCCTGGAGGACTGTGGCCACGGTGTGTGCAGCGGCCCCCCAGACTTCACCTGCGTGTGTGACCTGGGCTGGACATCAGACCTGCCCCTTCCCACGCCGGCCCCCGGCCCCCCCGCCCCCCGCTGTTCGCGGGACTGTGGCTGCAACTTCCACAGCCACTGCCACAAGCGGGGGCCCGGCTTCTGCGATGAGTGCCAGGACTGGACGTGGGGGGAGCACTGTGAGCGGTGCCGGCCTGGAAGCTTCGGGAATGCCACAGGCTCCGGCGGCTGCCGGCCCTGCCAGTGCAACGGGCATGGGGACCCTCGCCGAGGCCACTGTGACAACCTCAGCGGGCTCTGCTTCTGCCAGGACCACACCGAGGGTGCCCACTGCCAGCTCTGCTCCCCTGGCTACTACGGGGACCCTCGGGCAGGTGGCTCCTGCTTCCGGGAGTGTGGGGGTCGTGCCCTCCTCACCAACGTGTCCTCAGTGGCACTGGGCTCACGCCGGTTTGGGGGGCTCCTGCCTGCAGGTGGCGGGGCAGCAAGAGCGGGGCCTGGCCTGTCCTACTGTGTGTGGGTTGTCTCGGCCACTGAGGTGCTGCAGCCCTGTGCCCCCGGGACCCTCTGTCCCCCGCTTACCCTCACCTTCTCCCCCGACAGCAGCACCCCGTGCACGCTGAGCTATGTCCTGGCCTTTGATGGATTCCCACGCTTCCTAGACACTGGTGTCGTCCAGTCGGACCGTAGCCTCATCGCTGCGTTTTGCGGCCAGCGGCGGGACCGGCCCCTCACTGTGCAGGCCCTGTCTGGGCTGCTGGTACTGCACTGGGAGGCCAATGGCTCCTCATCCTGGGGCTTCAATGCCTCCGTGGGCTCTGCCCGCTGTGGGTCAGGGGGCCCCGGGAGCTGCCCTGTCCCCCAGGAGTGTGTGCCCCAGGATGGGGTCCCAGGTGCTGGACTCTGCCGGTGTCCCCAGGGCTGGGCTGGCCCGCACTGCCGCATGGCTGTGTGTCCTGAGAACTGTAATGCCCACAACGGGGCGGGGACGTGTAATCAGAGCCTGGGCGTGTGCGTCTGTGCTGAGGGCTTTGGGGGTCCTGACTGTGCCACGAAGCTGGATGGTGGGCAGCTGGTCTGGGAGACCCTCATGGACAGCCGCCTCTCAGCTGACACTGCCAGCCGCTTCCTGCACCGCCTGGGGCACACGATGGTGGAGGGACCTGATGCCACCTTGTGGATGTTTGGGGGCCTGGGCCTGCCCCAGGGGCTGCTGGGAAACCTGTATAGGTACTCAGTGAGTGAACGGCGGTGGACACAGATGTTGGCAGGAGCCGAGGATGGGGGCCCAGGCCCCTCCCCTCGCTCTTTCCACTCTGCTGCCTACGTGCCTGCTGGCCGTGGGGCCATGTACCTGCTGGGGGGGCTCACAGCTGGGGGCATCGCCCGGGACTTCTGGGTCCTCAACCTCACCACCCTGCAGTGGCGGCAGGAGAAGGCCCCTCAGACTGTGGAGCTGCCAGCCGTTGCTGGTCACACGCTTACTGCCCGCCGAGGCCTATCTCTGCTCCTGGTGGGTGGTTACTCCCCGGAAAATGGCTTCAACCAGCAGCTGCTTGAGTACCAGCTGGCGACTGGCACCTGGGTGTCCGGGGCTCAGAGCGGGACACCCCCCACAGGTCTCTACGGTCACTCTGCTGTGTATCATGAGGCCACCGACTCCCTCTACGTGTTCGGGGGTTTCCGCTTCCACGTGGAGCTGGCAGCCCCGTCCCCTGAGCTCTACTCCCTGCACTGCCCTGACCGCACCTGGAGCCTGCTGGCCCCTTCTCAGGGAGCAAAGCCCCGGCCCCGACTCTTCCACGCCTCGGCCTTGCTAGGGGACACCATGGTGGTCCTCGGGGGGCGCTCAGACCCCGACGAGTTCAGCAGCGACGTGCTGCTCTACCAGGTCAACTGCAACACCTGGCTCCTGCCCGACCTCATCGGCCCAGCCTCTGTGGGACCGCCAATGGAAGAGTCTGTGGCTCACGCCGTGGCCGCGGTAGGGGGTCACCTGTTTATCTCAGGAGGCTTTGGGGGAGTGGCCCTGGGCCGCCTGCTGGCCCTGACCCTGCCCCCTGACCCCTGCCGCCTGCTGCCCTCGCCCGAAGCTTGTAACCAGACTGGGGCCTGTACCTGGTGCCATGGAGCCTGCCTGTCTGGGGACCAGGCCCACAGGCTGGGCTGTGGCGGCACCCCCTGCTCCCCTATGCCCCACTCCCCCGAGGAATGTCGACGTCTGCGGACCTGCAGCGAGTGCCTGGCCCGCCATCCCCGGACCCTGCAGCCTGGAGATGGAGAGGCCTCTGCCCCACGCTGTAAGTGGTGTACCAACTGCCCCGAGGGTGCCTGCATTGGGCGCAACGGGTCCTGCACCTCAGAGAATGACTGTCGCATCAACCAGCGCGAGGTCTTCTGGGCCGGGAACTGCTCGGAGGCTGTGTGCGGGGCGGCCGACTGCGAGCAGTGCACCAGGGAGGGCAAATGCATGTGGACGCGGCAGTTCAAGAGGACGGGGGAGACCCGCCGCATCCTTTCGGTGCAGCCCACCTACGACTGGACGTGCTTCAGCCACTCACTGCTGAACGTGTCCCCGATGCCAGTGGAGTCATCGCCCCCGCTGCCCTGCCCCACACCCTGTCACCTCCTGCCCAACTGCACCTCCTGCCTGGACTCCAAGGGTGCTGACGGGGGCTGGCAGCACTGCGTCTGGAGCAGCAGCCTCCAGCAGTGTCTGAGCCCCTCCTATCTGCCCCTGCGGTGTATGGCCGGAGGCTGTGGGCGGCTGCTCCGCGGACCCGAGAGCTGCTCCCTGGGCTGTGCTCAGGCAACCCAGTGTGCCCTGTGCCTGCGGCGCCCCCACTGTGGCTGGTGTACCTGGGGGGGCCAGGATGGGGGCGGCCGCTGCCTGGAGGGTGGACTCAGTGGCCCCCGTGACGGGCTGACGTGTGGGCGACCTGGGGCCTCCTGGGCCTTTCTTTCCTGCCCCCCGGAGGACGAATGTGCCAACGGGCACCATGACTGCAACGAGACCCAGAACTGCCACGACCGGCCCCACGGTTACGAGTGCAGCTGCAAGGCAGGCTACACCATGGACAACGTGACGGGGCTGTGCCGCCCAGTGTGCGCCCAGGGTTGCGTGAACGGCTCGTGTGTGGAGCCCGACCACTGCCGCTGCCACTTCGGCTTCGTCGGCCGCAACTGTTCCACGGAGTGTCGCTGCAACCGCCACAGCGACTGCGCCGGCGTGGGGGCCCGCGACCACTGCCTGCTCTGCCACAATCACACCAAGGGCAGCCACTGTGAGCAGTGCCTCCCGCTGTTCGTGGGCTCAGCCGTAGGGGGAGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGCGGAAACAGCCACGTCTGCGTCTCCAGGAAGGAGCTTGAGATAGCCAGGAGGGAGCCGGAGAAGTACTCGCTGGATCCAGATGAGATTGAACACTGGGCGACAGAGGGTCCCAGCGAAGATGAGGCTGTGTGTGTGAACTGCCAGAATAACAGCTATGGGGATAAGTGTGAGAGCTGCCTCCACGGCTACTTCCTCCTCGACGGGAAATGCACCAAATGCCAGTGTAATGGCCACGCGGACACATGTAATGAGCAGGATGGGACAGGCTGCCCATGTCAGAACAACACAGAGACAGGCACGTGCCAGGGCAGCTCCCCCAGTGACCGCCGAGACTGCTACAAATACCAGTGTGCCAAGTGCCGAGAGTCATTCCACGGGAGCCCGCTAGGGGGCCAGCAGTGCTACCGCCTCATCTCCGTGGAACAGGAGTACTGCCTGGACCCCACGTCCCAAACCAACTGTTTCCACGAGCCCAAGCGCCGGGCTCTGGGTCCCGGACGCACCGTTCTCTTTGGAGTGCAGCCTAAGTTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTTGGCGCCGTGGACCTCTACGTCTCCACCTCCTATGACACCTTCGTGGTCCGCGTGGCTCCCGACACTGGTGTCCACACCGTGCATATCCAGCCGCCACCACCTCCCCCACCCCCACCACCCCCTGCTGACGGCGGGCCCCGGGGACCTGGGGATCTCGGGGGACCTGGGGCTGGAGGTGGGCCGGCTACCCCAGCAGAGCCGCGAGTGCGGGAGGTCTGGCCACGGGGCCTGATCACCTACGTGACAGTGACAGAGCCGTCGGCGGTGCTGGTGGTCCGTGGCGTGAGGGACCGGCTGGTCATCACCTACCCGCACGAGCACCACACCCTCAAGTCCAGCCGCTTCTACCTGCTCCTGCTGGGTGTGGGAGACCCAAGTGGGCCCAGTGCCAACGGCTCAGCTGACTCGCAGGGCTTGCTGTTCTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCTGTCTTCTTCTCCTGCTTCTTCCTCTTCCTCTCGCTCTGTGTGCTGCTCTGGAAGGCCAAGCAGGCCCTGGACCACCGGCAGGAACAGCGCCGGCACCTGCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACTGTCTGCTTCCCGCCAGACCCTGCTGCCCCAGCCCCCACCTGGAAGCCTGCCGGGCTCCCGCCACCCGCCTTCCGCCGCTCCGAGCCCTTCTTGGCACCCTTGCTGCTGACCGGGGCCGGCGGGCCCTGGGGACCTGTAGGAGGGGGCTGCTGCCCACCGGCCATCCCCACCACCACTGCCGGCCTGCGAGCCGGGCCTATCACCCTTGAGCCCACCGAGGATGGCATGGCCGGCGTGGCCACACTGCTGCTCCAACTGCCTGGCGGGCCCCACGCACCCAACGGCGCCTGCCTGGGGTCAGCGCTCGTCACACTGCGGCACCGGCTGCACGAATACTGCGGCGGCGGCGGGGGCGCTGGGGGCAGTGGGCATGGGGCTGGTGCGGGCCGGAAGGGGCTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACCCTCGGCAGGACCTTCGGCCCCAGCAGTCGAGTCCCCTTAGGGTGGCCGCCCTGGACTTGGGGCCCCTCCAACTGGGACACTGTGTCCTCAGAGACTTCTGGTTTCCTTCCCCTGGGGGGAGGGTCCCCAGACAGAGCCTTCTTTGTTCTGCGTTCAACAATTACTGACTGAATACCTACTACGTGCCAGGCACTGTTGAAGGCACTGGGCGTGAGTAGGAACCAAGACAGTCAAGGTCCCTGATCTCGCGGGATTTTAGGTCCCAGTGCCAGGAGACAGTCGACGTGCGCATGCGCACGCACACGCGTAAATGAGGAAAAGCATGTTGAATCGGGCGAGTGGAGTGAGTTAGCAACGGGATGCGCTTGTGAGGGACCTCGGGGTCGTCAGTTGTTCACTGTGCGAAGCTCGACTTTAAGAAGGAAACCGACTGTGGGAGGACCTGTGGGGAGCGGGATCCAGGCAGAAGGAACTACAAGGACAGAGGCACAGAGGCGGGAAGTGGTTGATGTTACTGAAAAGGGTCGGAAAGCTGGCCAGTGTGACCCTGACCGAATGTGCAGAGGCGGTGGGGTCAGGGTCGAGCAGGGGGCAGATCACCCGGGGCCCACCAACCCCGGGTAGGGCTTAGGGTTTTATTCTCAGGGCATTGGGAAGCCATTGGACAGTCTTCTGAGGGAGAATGACAGGATCCGATGTATTTAAGAGGTCACTCAGCTGTGTGGAGAATAGACTGGAGATGCCGAGAGAAGCCGCAGTGGGGCAGGACCCGAGATGGGCCAGGTCAGGGCAGAGGCTGTGAGAGGAGACTGGGACAGAAGCGGGTGAGTGGAAGGATGTTATGATGGCAAACATGGACATCGGAGTAGGGGAGGGAAGGAGGCCAGGCTGACGCCAGCTTTGTGGCCCAAACTGTGGGCCGAGGTGGGGTTGTTGGTGAAGGTGGGACAGACTGGGGCTGTGGGGGAAGATTAGGAGTCCAGCTTTAGACCTGAGATGCCTTTCAGCGACATCTCTTCAGTCAGGTCCCACCAGGGACACAGCGGCTGCCCTGAGGATCTGGGCAGAGGGGGCTGAGTGTGGGGGTTGGCTCAGTGGTGAAGGAGGGGTGCTGCTGTGAGGAGACTGGAAATGGGGCCGCCCAGTGAGCCAGAGCAAGATGCTGTTTCTGCCACCACGAGGCTGCAGGGACAAGCTCAGGTGGTGGTCCCCGACGTCTGGGCCAGGGTCGCTGCGCTGCCAGGGCGCATGAGGAGACAAAGCCCCTGCCTGAGATACCCTCCTGGGTGAGGTTGTGGGGGGAGGGGGATACCCAGGTTGGGAATAGAAATGACAGTTTTCAACCTATAATTCTCTTCCCAGATGACATTTCCTTGAAGCAGCATCTGGCCTTTCCCCAAGGCCTCCTCTTGCCCCAGCCGCCACCTTGGATTTCTGAGCCCTTCTGTCCCTAGACTGCCCCACCTCCCCCAGTCCTAACCATCTTGAACTTCGGACTCCTCCTTTCCCAAGACTCCACCCCCCAGCTCTTTTTTGGACCTTGGAAAGCAGGGACCCTGTGTCTTCCTATCTGCTGGGGGCCTTTGTCTAAGAGGCTGATCCCTATGTTGCCATCAGAGGCTGTGGGAAATTGGGGGAGCAGTAAAAGCAACAAATAAAGAGTGTGTGAAGA EMBV3_23766 CACCATGTAATTATTCTGTTAACTCCTTGCTGGTGGAAATGCAAACCACGTCTATCAAGA Gene GeneID:616397|ZMAT4:NM_001076943:103_cdna Constitutive 3 NULL GeneID:616397 27 GENE ZMAT4 NULL zinc finger, matrin type 4 EMBV3_21023 TTCCATTCCGCTGTCTTCAGTCTCCTCAAGGCTAACAACCCTTGGCCCTTGGGTACTTCT Gene GeneID:517587|INHBE:XM_002687564:594_cdna Constitutive 0 NULL GeneID:517587 5 GENE INHBE NULL inhibin, beta E EMBV3_09879 CAGAATTGCCAGGTAGAGCCTTTCCAAAATTCCTGACCCACAGAACCATGAGCGAAAATG Gene BVV0102_036124 + 0 NULL GK000008.2:60867216-60872658 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227830 TCONS_00227829 1 XLOC_138347 Coding TCONS_00227829 XLOC_138347 Coding Coding GNE 8:60867330-60912145 j TSS170002 8191 1 TCONS_00227829_3 722 0.320962031497986 12 0.81749007006739 7.00390158409246e-11 0.000196981729733021 1.08469840351597e-05 1.44817618040851e-14 4.64024768809671e-05 1.37937862170373e-06 2.26393971670081e-06 1.02947539068591e-16 1.21705847592636e-07 0.000132350234222869 4.47406607588805e-06 3.07988101308767e-05 9.45539084877018e-05 0.000338380624294809 8.18677970582616e-05 0.00170490595245005 3.86868743370421e-05 0.00106021180767256 0.000182686326264616 5.33657780752726e-05 7.11550047512974e-06 0.000524280547606354 0.000210312923679217 0.000586104549463142 9.73161000207362e-05 4.8391292837111e-09 8.91310466070895e-05 0.000229781502633502 7.60854979782666e-05 0.000179134323082895 XM_005210123.1 GNE PREDICTED: Bos taurus glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase (GNE), 0.0 1.108e+04 100.00 0.749725308265169 NM_005476.5 GNE Homo sapiens glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase (GNE), 0.0 3498 88.77 0.324746673177878 TCONS_00227829_3 sp|Q9Y223|GLCNE_HUMAN GLCNE_HUMAN Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; 0.0 1463 98.34 0.998614958448753 2 coding 0 0 0 0 -0.0882269968757423 0.562877838373501 0.0117243210731649 0.869177319635166 CGGGGTGCGCCAGGAGCGGGTAGAGGCGAGTCATCGCTCTCGGTGCAGAGTGGCGGAAGCCGAAGGGGCTGTCTCGCGCCGGCCTGCGTTCCAGCTCGGCCCTCAGTTCTCACCCGCGAGGTCTGGCGGCGGCGACGCGGGAGAAACAGCGGACCCGCTACTGGAACTCTATTTTCAGAACCTCTCAAAAAGAAAACAAATCATGGAGAAGAAAGAGAATAACCGGAAGCTTCGGGTTTGTGTTGCTACTTGCAACCGTGCTGATTATTCTAAACTTGCCCCCATCATGTTTGGCATTAAAATGGAACCTGAGTTCTTTGAACTTGACGTGGTGGTACTTGGCTCTCACCTGATAGATGACTATGGAAACACGTATCGCATGATTGAACAAGATGACTTTGACATTAACACCAGGTTACACACGATTGTCAGAGGGGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTTGTGAAGCTACCAGATGTCCTTAATCGCCTGAAACCTGATATCATGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCTACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGCGGGGAAGTCAGTGGGACCATTGATGACTCTATCAGACACGCCATAACAAAACTGGCTCATTATCACGTGTGCTGCACCCGAAGTGCAGAGCAACACCTGATATCCATGTGTGAGGACCATGACCGCATCCTGCTGGCAGGCTGCCCTTCCTACGACAAGCTGCTCTCCGCCAAGAACAAAGACTACATGAGCATCATTCGGATGTGGTTAGGTGATGATGTAAAACCTAAAGATTACATTGTCGCACTTCAGCACCCTGTGACCACTGACATTAAGCATTCTATAAAAATGTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTTCTGTTTCCAAATATTGATGCAGGAAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAATTTTCGTGCAGTTAAACATGTCCCATTTGACCAGTTTATACAGCTGGTTGCCCATGCTGGTTGTATGATTGGGAACAGCAGCTGTGGGGTACGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACTTAGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTCCTTCATGTCCGGGATGCTGATACCCAAGACAAAATATTGCAAGCGTTGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATTGATCTTCAAGAGCCACTACAAAAGAAATTTTGTTTTCCTCCTGTGAAGGATAACATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCTGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACGTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTAGAAGCCGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCATTTCTACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATTCAAGAATGGAACTCCGTGGACCTCAGAAGCCCCCTGTCTGACACTTTGCATCTCCCCGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCAGAAAGGAAATTTGGCCAAGGAAAAGGCCTTGAAAACTTTGTGACACTTATCACAGGCACAGGGATCGGCGGGGGGATCGTCCACCAGCATGAACTGATCCACGGCAGCTCCTTCTGTGCTGCAGAGCTTGGCCACATTGTGGTGTCCCTGGATGGGCCTGATTGTTCCTGTGGAAGCCACGGGTGCATTGAAGCATATGCCTCTGGAATGGCCTTGCAGAGGGAAGCAAAAAAGCTACATGATGAAGACCAGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAAGCTGTGGGCGCACTCCATCTCATCCAGGCTGCAAAACTTGGCAACGCAAAGGCCCAGAGCATCTTGAGAACAGCTGGAACAGCTTTAGGTCTTGGGGTTGTGAACATCCTCCACACTATGAATCCTTCCCTTGTGATCCTCTCTGGAATCCTAGCCAGTCACTACATCCACACTGTCAAAGACGTCATCCGCCAGCAAGCCTTGTCCTCGGTTCAGGATGTGGACGTGGTGGTTTCCGATTTGGTGGAACCTGCTCTGCTCGGCGCCGCCAGCATGGTCCTGGACTACACGACTCGCAGGATCTACTAGGCCTCCCAGGAATGCACGAGGACAGAGACTCGAGAGCTCCTTGGTGGAATCAGGTTGTCTTCTAGATGAGCATTTATTAGGCAATCTGGCAGGTGACTATGGCAGAGAAGTTTTTGCTTTTAGTCTCCTCTTCCAAAGTCAGTTTTCCCAACCTGATTTTGTAGATGCTGTTCCTCCTGGGGTTATTTCAGCTCAAACCTTGTCATACTCTTCTGTGCCAAAAGGAGCTACAACAGTAGCCAAGGACGCCTTAGGACTCCGTTTACTAGATGTACCACTCAGACCTGCAGGCCTTGCTTGGGGTGGGACCTTGATACTGGAGTTTTGGTTATTAATCCTTCCTCCTCTGACCCTAAATTCAGAACACAGAAAGGGATCCAGTCAGGGAATGGAAGGAAATCTCACCACGAAAGGCTTAAGTAAACTCTTAAAAAGCAGTTTTATTGAGGTATTTTTTTAAGTGCACAATTTGATAAGTTTTGACATCTATATGAAATCATGGCCACAATCAAGACATCAGGTGTATCTCTCACTGCCGTACGTTACTTGCTGAAAGACGTCGTTTGCTATTACTCTCTCAGAATCTTGAGCAACTGTAGATCAGAGGTCTGAATTACAGTGGCCTTAGTGACCTTGTCCTTATCTTCTTAAGGACCGCTGAGAAGCCACTAGGACTTACAGTCTCTGAAAGGAGATTAACCGTCCCAGAAGGATCTTTGCTACTGAGAACAGACATGTCTCTCTTCAGTAGCTTTTCATATTGTGTTGAATATGACTGGAGTACTGATAAAGGCAGTGTTTATTGTGTGTTATATACCTAGAGCCCTGGTGGCTCAGACTTACCATCTGCCTACAATGCGTCTGCCTACAAAGCAGTAGACCCAGATTCAATCCCTGGGTCGGGGAGATCTCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTAGAAAATCCCATGGACGGAGGAGCCTGGGAGGCTACGGTCCATGGGGTCGTGAAGAGTCAGACACGACTCAGCGACTTCACTTTTGCCTAGAGCCCACATCCGTGAATCTGGATTCTGGCTAAGTAAGATTCCATGTTTGTATTAGTGTCAAGATGCAGAGGCCAAGGTTCTTGCTATCAATTTCAACCTGGAAGAAATACTAATAGCCACCACTTATTAAGTGCCTACTGTGTGCCAGGCTCTGAACTTGGTGCTTCATATACATTATTCTAAATTCTCACAACCAGTAAGGTAGGTGTTTTAATTCCCATTTTATAGAACCCCAAACTAAGTCTTAAGTGGTGTGCCTAGAACCACATGGCTAATAAGTCTTAAAGATAAGGTTTGAGGCGGGTCCCTCTGTGCTTTTTCTGCTAAGCTACACAACCTCTAGTCATATCAAAATCTTCCAAAGTGCAAATATATTCTGATTTACTCCAGGCTACCGAAAGCTTTCACAAGAATATCTCAGTAGCAAATGAATTGATTTATCCTTGACACTATCTCTCAGTGGTGAATTTAATAAAATATTCTTGTATGCTATGGAAATTTTGCCAATATAGTATTTCATCTAGTGACAGGTTTTTATGGGTACTTTTAGACAATCTAAAAATTAGCATATGTTTTTCAGATTTATTATTTTAGGGAAACCTAAAGGTTTCTACAACATATTATTTCACTTGTTCCCATGTAAAAGAATCAAGATTGTATTTGAATTCCTTCCTTCCTTGTGGGTTAATGTGAAACCCACATTAAGCAAATGTGGGTTGGCTGATTCCTAGAAGTCTGTCAGCTCTGAAATAATCTCCAGGTCCTGGCTGAAACATTCCATGTTGACTCCTGGGAAGGAAGCTTGTTGGCTTGGCCATCAGTGTCTGGGGCCAGTCAGTGTACTGTGAAGGGGCATCCATTGTTCCTTGGTGAAATCTGCAACCACTGTATATACCAGACAGTTGCATTGCTATCAAGTTTCATACCAAATATTTGGAAGAATGGTACTGAATCTATAAAATCAGAACTCAGTTTTTATTAAATTCATGGAAAGGCTAATATATTCCAACATAATTATTACAACTAGCTAAAATCACATAACTTATTTTAATGTAAATATTTTTATGTTACTGTTCTGAGCCAAATTCTAAAGAAAAAAATAATTTCCTTGTGGAAATCCTGACATTTTTCTATTTTGTTTTGTTCTTAATTAGCTCATTAGCTAAAAACATTTCCCTCCCCAAGAGATTTGTTATACTGCTTACTATTTGAAGGTCTTTAAGGTATTTAATATTGACTTAACAATCCCCCCCAAAAAAACCTTAATAGAAAGCATTGTTATGTAACTTTAAAAATACATATATTGCAAAATGATTACCACACTGTTTACCTAACATCATCACAATCCATAGTTAAAAGTTTTTTTCCTTGTGATGAGGACTTTTAAGATTGATTTTAGTAGCAACTTTCAAATATGCCTTATGGTGTTATCAACTATAGTCGCCATGCTGTATATTACATCCCTGTGACTTTTGTAACTGAAAGTTTGTACCTGACCCTCTACACCCATTCCCCACTTCCCAACCCCGTCTGTGGCAACCACTAATCTGTTCTCTGTGAGCTGGGTTTTGTTTTTTTAAGATTCCACATAACACTTAGATCATAATGGTATTTGTCTTTCTTGGTCTGCTATTTGCTTATTTAGTATAATGCCCTCAAGGTCTATCCATCGTTCACAAATGGGAGGATTTCATTTTTTTTAATGGCTGAATACTATTCTGTCATATGTATTCACACCACATTTTATCCACTCATCTGTCAATGGACACTTAGGTTGTTTCCGTTATCTTGACTGTGTGTATAAGGCTGCATGTACCTCTTGGAGTTGAGTGCTTTTGTTTTCTTTAGATAAATACCCAGAATTGGAATTGCTGCATCATATGGGAGTTCCACTTTCAGTTTTTGAGGTCCCCCCATACTGCTTTCCATGGTGGCTGCACCAGTTTGCAGTCTCGCCAACAGTGCACAAGGGTTCCCTTTCTCCTCCTCCTCTCCAGCACTTGTTATTTCTTGTCTTTTTGATAACAGCCATCCTAAGAAATGTGAGGTGGTATCTCACTGTGGTTTTCACTTTCATGATTAGTGATACTGAGCACCTTTTTCATTTCCCCAGTGGCCAGCTGTATCTCTTCTTTGGATAAATGTCTATTCAAATCGTCTGCTCATTTTTAAATTGTTTTTATGCTATTGAGTGTATGAGTTCATATATTCTGGATACGAACCCCTTATTGTATGTATGATTTGTAAATATTTTCACCCTTTCCGTAAGTTGTCTTTTTGTTGCTAGCTTTCATTTTGCAGAAGCTTGTTTGTTTGCTGTGGTCCTGCTAACTGACCATATACGTGAGTTTATTTCTGGACTTTTTACTCTTTTCCGTTGACCCATGTGTCTGTTTTTATGCCAATTATTGTTTTGATTACTAAAGCTGTGTAATACAATTTGAAATCAGGGAGAGTAATGCTATCAGCTTTGTTCTTTCTCAAGATTGCTTTGGCTACTGAGGTCTTTTCTATTTCCACACAAATTTTAGGACTTTCATTTTTGTGAACAAAATGCCATTGGAATTTTGATAGGCTACACTGAATCTGTAGATTGCTTTTGGTGGTACGGACATTTTAACAGTATTAATTCTTCCAGTCCATGAGCATGAAGTCTGTTTAAATTTCTTTCATTGGTGTCTGATAGTTTTTAGTGGTTATATTCTTAGGTATTTTATTTTTTGATGCAGTTGTAAATGGGACTGTTTTAATTTCTCTTCCTGACAATGTTATTAGTATACAGAAATGCAACAAATTTCTATAATTGTTTTTATACCCTACAACTTAATTATTAGTTGTTATTGGTAACAGTTTTTAGAGTTTTTTGTATATAAAGTCATGTCATCTGCAAATAGTGACAGTTTTATTTCTTCCTTTCCAATGTGGGCATTTTTTTTTTTTTTTTCTTGCTTAAGTGCAGACACTAAATGCTGAGCACTCACTGAGTTCTTGGACCAACCCCTTCCTTTTTATGAAGCCCCACGTGGGTAATGTAGGCATTGGAGACAATTCAGAGTTACCACTGCTGTGTAACAAACCACCTCAAAGCTTAAGAGGCTTAAACAGTAATCATTTTCGCTCATGGTTCTGTGGGTCAGGAATTTTGGAAAGGCTCTACCTGGCAATTCTGACTCAGGGCATCTGATGTGCTTGCAGTTAGGCAGTGGCTGGGGCTGGAACAGGGCTGGCCATGCATCTCTTTGCTTGTAGTTTCAGGGTCTCTCCAGGTAGGCTGGTCTGGGCTTCCTCATAGCATGGTGGCCTCAGGGTGGTAGAGATTTTTACATGGTGACACAAGGACTACCAGCTTGTTTGTTTCAACAAACCAGCCGTAAGCTATGTCGCCCTTTACAACCTAGCCTCGAAAGCATATAGCATTACTTCTGTCATATGATGCAGTCACCCTTAATTTGGAGAAAAGTCAGACTTTACGGACCTAACTGCCACATCTACCTTCAAGACACCCATCCTATGTGAGACGCAAAACCAGGCCAGATGACACCATCAAGACATTATCAAAAGGTAAGCTGTCCCACGTAGAGAGGGTCATGGGAGCTCAGGGGAAAGGAAAGGCATCACGTTAAGTGGCCTTTGAGCTAGTTCTTAAACTGGACTGTGATCTTTTCAATGACATTAACAAGGCCTAGAAGCAACAAATGGTTGGTGAACAGCAGCAAGCAATTGCTTGACTGAAATCTCAGGTGGCTAAAGGGGAGGAAGAGCAGTAAGACCAGCAATGCAGCCCAGATCAAGGAATGCCCAACTAAGTAGCTTGGCGAGGGGAAGATAGGCCAAAAAAGTAAACATTCCTGTCCCTCCCAGACATAATTACCAAAGAAGAGACGGTGGACTTTCCTTCTTGGCAATGGCAAGACCTAACCCTGCTCACCCACCTCCTGAGTGTGGCACTACAGGTGTTTACACCAGTCTGTATCCTGGAACTAGTATCAGGTAACTCTAGCACATTTCTGAAATACGGTTTTATTAGTCACTCCATCCATCACCTATAATGTGACAGGTTCTGAGAGCAAGTAGTGAATGTGTTGATGCCTGAAATGGGAGTACGTCTCCTACAGGTACCTGTTACGTGGATCCGTGTGGTCCAGAATGTTATGTGAAGATGTAAATGTTCCATAGTCTGCCCTGTGCAATCCAAATGCATCCTAACTACATGTGGCCACAGCACATATGAAAAGGAGCTAGGGCTAGAATTGTGTTTTTCATTCTGACTGATTTAAATAGCCACTGTAGCTACTGTACTGGCCAGCAAGGTCTAGATGAAGGATTTGACAACAGGAATATGAGCAAAGTGCTAGGAATGGCACAGATCTCAGTGTGTACTACAGGGATTCAGAGAAACAGGGCCAGGCATGCTCATGCCATCCTGACTCAGGTTTACCTGGCTTAATCCTAAGGAGCAAGTGTCTCACTAGGTTCTATTGCCCAGGGAGAACCCTGCTGAAATACACTACCCAGGCTCCTACAGTCAGGGACAGTGACAAACGAGCCACCTGGGAGAAAATGTCCAGGGTGAAGAGGGGATTCATAGCTCTATCTTCAGTGGGCAGTGAGAGGTTAATTTTTAGCCAACCTTAGTGGGCTGCCGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGTGACTTAGCAGTAGCAGTCCTCTTTCAAATGGAAACATCCACAGACTCCTACTACAGACAGCAGAAACTCAGAGCTGTTTTAGTTCAAGGCAGGGTG EMBV3_23590 AGTGGGGCCAGGATAAAAAGTTGTCCAAGTACGAGACCCTGCAGATGGCGCTAAGCTACA Gene GeneID:539903|ATOH7:XM_002698858:437_cdna Constitutive 0 NULL GeneID:539903 28 GENE ATOH7 NULL atonal homolog 7 (Drosophila) EMBV3_11794 GCTGGCCGGAATTCGGGGGGAAATGAACAGTCTTTTGTGACAGAGAATCTGAAAGTGGCA Gene GeneID:537817|TBC1D9:XM_002694365:151_cdna UTR3_Alt 2 NULL GeneID:537817 17 GENE TBC1D9 NULL TBC1 domain family, member 9 (with GRAM domain) EMBV3_22801 TAAGGGACCAGGATACGGGGAGCTGTGGCAATGGGAATGCAGACATCTGAAGAGACATCT Gene GeneID:768314|GPATCH4:NM_001078129:251_cdna Constitutive 1 NULL GeneID:768314 3 GENE GPATCH4 GPATC4 MGC128377 G patch domain containing 4 EMBV3_04678 GGTCTACATGTTCAAGTGTGTGTGGAGATGCTACAGACTGATGAAGTGCACGAACTCGGC Gene GeneID:512361|LAPTM5:NM_001046118:103_cdna UTR3_Alt 2 NULL GeneID:512361 2 GENE LAPTM5 HA1520 MGC128686 lysosomal protein transmembrane 5 EMBV3_16261 CTCCAGCCATCATTTCCTGCTGAAGCACCTGGTCCCGGGTGCCGACTACGACCTCTGTCT Gene GeneID:530084|LRFN4:XM_002699360:263_cdna Constitutive 0 NULL GeneID:530084 29 GENE LRFN4 NULL leucine rich repeat and fibronectin type III domain containing 4 EMBV3_13507 GGAGCACGGCCTGCCGGAAGAGTGCTGTGGCTGGAAGAACTCCTCCCAGCTTCTAAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33730 TTCTCACCGCGCGCTGCGGAGCATCTGGGGGAACTAGGATGAGTGCATAGTATCTAAGAT Gene BVV0102_190201 - 0 NULL GK000008.2:73183913-73411195 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18329 TGTCCTGAGGTTGGCAGCCTTGAGTGGCAGAGAAGAAAGCGATGTCCCTCCAAAAGAAAA Gene BVV0102_450770 + 1 EMBV3_15142 GK000027.2:37415391-37422652 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155628 1 XLOC_094779 NonCoding TCONS_00155628 XLOC_094779 NonCoding NonCoding - 27:37419915-37422272 - TSS116405 1427 0.103714085494043 2 0.395161290322581 5.72068524795052e-05 0.000105624659295928 4.53945306049196e-05 0 0.00028370557554114 0.000406084930455368 2.86067924751388e-05 0.0002127689091651 0.000469979233639928 6.63163181020394e-05 1.60419374039654e-06 5.01147737785316e-06 0.000219167381592337 2.30749932360934e-05 0 1.85084588692148e-05 0 0 4.52265944031893e-05 4.0316326035412e-05 2.12735388591706e-06 3.12011543465636e-05 3.21444582514044e-05 0.000152726106487682 0.000131092353471908 4.93726055750147e-05 0.000447545105774557 0.000107696504847103 0 4.21321139899434e-06 XM_005226107.1 LOC514490 PREDICTED: Bos taurus protein kinase-like protein SgK196-like (LOC514490), transcript variant X2, mRNA. 0.0 2232 100.00 0.866152768044849 0 noncoding 0 0 0 0 0.0383432720458724 0.795196830234317 0.0134766685186949 0.790163470219588 TCCCGGAGCCGCGCGTGCAACCGGCGAGCGGCTAGGGGCTGCGGGCGAGAACGGGGGCAGCTGGCCCGCGTACTGCCCGGCGCCCTCGCTTGACTGGAGCCGACGGACACTCCGCCGGGACGGACACCTCCGGCAGAGGTGGTCGGCGCCGCGCTGCCCCTGCCTCCGGGGGCGGCTCTGAGTCCGGTGCAGTCGTCTGCTGCCCCCACTTTTAAAAAGCAGGGTTGAGCCGTGTTCTTTGGTGGTCTCGTCTTCTCCACCCTTGATCCCTGCTTTAGAACCTTAAGGCTAAGCAGGCATCCAGCATATTTAAAATAATTATATTGATGTGCCTGTGCTTTGTTGGCAACGTGGGGTACAACCAAAGTTGTGTTGTGGAGCACGAATTCGTTTCTTCTCTGGTTGTAAAAGATATTCTATAGATGGCAGAAACCAATTTTGTTCCATTGCTTTTCTTTTTCGTCACGCTTCTCCCTCCCACTGCCGTCTCTTTCTTTTTTAAAAATTAAGCTGTGAGTGTATAGCAGTAGTTTCCACTTTTCCTGTTACCAGTTTTTTATTATTATTGTCAGAAATCCAGTGTGCCTTAAGCAGTGCCTAATCAGTAGCTTTCGCTATCAGTTTGCTTTTTTCTGGGCAAGAACATTCCCTCAGCCATACAATCTTATCCCTTAACCCTGGGCAGCCTACTCCAGAAATATGCCTTTAAAACAAACAAACAAATCAGGTGATGGGGTGAGTGAAAGACTTCTTTAATAAGCAGATGGACAGTCTCAGGGTCTCAGCATGGGTCCCCTAATCCTTGCAGTGACCTAGCTGTATTCAGTTCAGTCCATTGTCTGAGGCTGTAGGATTTAGAGGAAGAATGTTAATTTGAGGCCAGAAAGTTTGACTTCTTTGTGTACAGTTTTAGTCACCTTGGGTAATTCGCTCTGCCTCAGTTTTTCTTATCTGTAAAATGGGGATAATAGCAGTTATATCTAGCTCACAGAATCCGTGTCAGACTGACACAAAATGGTAGCTGAACTTCTGGATGCGTGTCTTTCTGAGATGGGATTCAGAAGTGCTTGAGGGGACTTTGGGATCATTGAAAGGCTAGTGAGGCGCACGGCTGTCACGTGGACAAGAAATGCATTAAAAGGGTGATGAGAATCCAGCGCAGAGTCGAAGATGTGAACGTGTCCTGAGGTTGGCAGCCTTGAGTGGCAGAGAAGAAAGCGATGTCCCTCCAAAAGAAAACAAAAGGAGGGACTTGAGCCCCCACAGACGGTGTTCACGGGAGTCCTGGAACCAGGCCCCTGCGGTTACAAGGACAGCGCCGCTTGTGTAAAGCTTGGAAGCATTCGTGCGTTCTGTGTTGTTACTTGGGGGCACACATCTATGTGGTGAAAATAAAAAGCACGCGTGGAAACTGAACCTTGGGCAGG TCONS_00155629 TCONS_00155630 TCONS_00155631 s 5' 381 TCONS_00155629 TCONS_00155630 TCONS_00155631 s 5' 2737 EMBV3_25760 CTAATGTTGGAATTGCTATTGGCACAGGCACAGATGTAGCCATTGAAGCAGCTGATGTGG Gene GeneID:541275|ATP7A:XM_002699979:56_cdna Constitutive 0 NULL GeneID:541275 X GENE ATP7A NULL ATPase, Cu++ transporting, alpha polypeptide EMBV3_39572 AGGTGCTGGAGTTCGCCGAGTTCATCGACAGCCTCTTCAACTTGGACAGCAAGAGCAGTT Gene GeneID:523665|DAGLA:XM_002699283:210_cdna Constitutive 0 NULL GeneID:523665 29 GENE DAGLA NULL diacylglycerol lipase, alpha EMBV3_29998 ATGATATTACTATGCAAAGCTTGCCAAAAGAAGATGGGCTTCATGGGATTGTGAGCTGTA Variant GeneID:514473|ATRX:XM_002699982:65_cdna 371^484 4 EMBV3_14110 GeneID:514473 X GENE ATRX NULL alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) EMBV3_42401 GAAGAGGATGAAGCTGTAGCTCCAGACCCAGATAAATCTTTGGAGTTGGAAGAGCATGAG Gene GeneID:518472|GTF3C6:XM_002690113:120_cdna Constitutive 0 NULL GeneID:518472 9 GENE GTF3C6 NULL general transcription factor IIIC, polypeptide 6, alpha 35kDa EMBV3_29625 GTCACCTTCATAAATATGTTAAAAGGTAAATGAGCTATGACAGTCATTATTCTCATCCAG Gene GeneID:539843|ZBTB38:XM_002685040:106_cdna Constitutive 1 NULL GeneID:539843 1 GENE ZBTB38 NULL zinc finger and BTB domain containing 38 EMBV3_14245 CAGGTAAGGCCACCCAGAGATCGAGTTCCTGAGCAAAGTCCAACCTCCAGACACATCCTT Gene BVT0102_137298 + 1 EMBV3_41287 GK000005.2:120858590-120908147 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00235 TAGATATAAGATGTATAAGAAGTCTTAACGGCCACAACATCTATTCCAATATATTAGGTT Variant GeneID:338051|PAPOLA:NM_176647:151_cdna 654^743 2 EMBV3_34330 GeneID:338051 21 GENE PAPOLA MGC127552 PAPOLB poly(A) polymerase alpha EMBV3_42679 TACAATGTATTTATGTATGTTCTACTCTGGTAATATATTTATGTACATTATTTTAAAAAG Gene GeneID:520702|WDR63:NM_001099013:50_cdna Constitutive 2 NULL GeneID:520702 3 GENE WDR63 MGC159783 WD repeat domain 63 EMBV3_04438 AGTGGCGCCCGAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTTGAGAAAGTG Gene BVV0102_217874 - 1 EMBV3_23203 GK000001.2:143000908-143048267 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011558 1 XLOC_007109 Coding TCONS_00011558 XLOC_007109 Coding Coding - 1:143007882-143010714 - TSS8635 2832 2 TCONS_00011558_5 62 0.465395480225989 1 0 8.02970445136846e-06 1.77408831378407e-06 5.4460879013507e-07 8.74637794505735e-06 2.29105740166784e-06 1.3753609301823e-06 2.65982130956768e-06 3.39386366798127e-06 2.49584232708124e-06 8.68362374248263e-05 7.02177588024836e-05 0.000161614256070168 4.60646559851866e-05 5.63774888038497e-05 3.13091900546755e-05 0.00458885724737939 0.00213800493862495 0.00485347193739789 8.22935683322184e-07 2.92538322013361e-06 2.1540819454267e-06 0.00134092072886986 0.00224531031859306 0.00341813137607319 2.44650435147268e-06 1.03602028146739e-05 6.75933779858738e-06 0.000412022530556674 0.000398432529215012 0.00057271518189259 XM_867016.5 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 2e-173 614 95.60 0.13524011299435 TCONS_00011558_5 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 2e-09 54.3 60.00 0.709677419354839 1 noncoding 0 0 1 1 -0.595416926795943 0.174418025970049 -0.0383345061947562 0.593236167095668 GCGGGGAGCGAGCTCCGCCTCTGGCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGCGGGATCAAGCCTCAGGAGTCTCCCTGGAAATTCTCGAGCAATCTACCCCCAAAACCAGAGTCTGCCTACTTTCTGCTTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTGAAAAAAGAGTTAGCTTATAGCTCCAGTTAATAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCCTTGGAAGTCCTCTAGCCTGCCTGAATAGGTTTTTCCGGCCACATGTGATTGCTCAGAGCCTCCAAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTCAAAAGATTGATTAGAAATTGTATTGGTGAAGGGATTTTCACTTGTTGGGCCAATGTTTGCTGCTAAGTCTCCATATCCCTTACCTGCTGTGTCCCTGGCAGTGTATTGATTAATATAATTGGTTTAAATAGTAGCTTTAATGTTTGTAACCTGGGACCCTTGAATTAATTCTTTTTCTTGTTATAGCCCACCACACCTTTGCTCTGTAGGAATGCAACTTTATCTAATGCTTTTTGGAGGCTGGCGCCTGACTTTAGAATAATCACCTTTAGAGAAAAAGGCCTCCGGGCCAGAAGATGATGCAAATCACCTAAACTTTTGCATATGATAAGTTTGCAGGAAGAAAGCCTGGCTTACTGCATGACTCTACCCCTTCCCCCATTATCCTCTATGCATAACTTAAGGTATAAAAACTACTTTGGAAAATAAAGTGTGGGCCTTGTTCACCGAAACTTGGTCTCACCATGTCGTTCTTTCTCTTACCTTCTGGCTGAATTATTCAGCCTCTTTTCTCCACTGAATTTCTTCACTGAGCTATCCTCATTCTATTACTCTTTATATCCTTAATTAACGTTTAATTAAGCAGTTGTTTCCTGATCCTCGCCGACGCCGTCCCCGCTTCGAATACCCTGATCAGCCGGGGCTGGTCCCCGGCAAGTGGCGCCCAAACAGGCTGATTCGAAGGTAGGTACCTCAGAAAAAGTGTTGAGAAAGTGTTGAATTGAAAAAGTGTTGAGAAAGTGTTGAATTTACGGGACGGATAGGCCCCCACCCAGGGTGCCGCGGACCCCCCTGTAGGACAGACAGGGTGAGTAGTGGTGGGAAGTGTTAAAGGGGTTTGAGAGAAAACCCGGTTTTTATTGAAAGTGTCAAAGGGGTTTGAGAGTAAACCCGGTTTCTAGAGTTAAAAGGCCAAAGAAAAGCCTGATCTTTTAAAAGCTAAAAGCTTTATCTTCTATTATACTTAATTTTCTGACATGGGTAACACTGAAACTAAGAATGGCAACTCTTTATACAAGTAATCTTGAAACTGTTAAAGAGGCTACTGTTAATTTAGATACTTGGGTGAAGGTAAAAAACAACTAAACACTTATCCTATAAATATGATTAAAAATGTTCTGGACCCTCGTCATGAGGCTGTGGGATGACCTATGGGAGAGGCTATAGCGGTGGATGGTAGTGGGTCTCCACCTTCTGCGCAGATCATATTTTCTGCCATTGACGAAGAAAAGGAGGAGACTGTGCTCTACCTCCGGAGGAAGGAGAGGGCTTACAGGACGCTGCGGCCGGGCGTCCTGACGAGCCCCCTCCCCCTCTACACAAACCTTTAAAAATTTATCCAACAATTTCTGATTTAAGGTGACTACTCCACCTCCGCTTGCACCTCCCAGGGCCTAAGAATTCCCCAGTTTACATCCAAAGTCTCCCAGAGCATTGCCTAAAGCTGAAAAACATAAAAAAGACTTCTTTTAAACAAAGGAGCTTTTAAAAAATACACAATATACAGAGCCTGCTCCTTGAAGAAAACCCCCTCAGGGGGGCCTCACCCAAGCAAAAAATAAATAAATAAATAAAAAGAGAAAAAAATAAAAATAAAAGTAAAAAAAAAAAGAAAAAATAGAGAAAGATCTAAAGATAGAGAAAAAGCTAAAGAGTGAAAAGGAGAGAGGAACAGAGAAGGAAGGAATCAGGGAATGCAGCAAGATTGAGAAAGGAAGAAAGGAAGTTAGAAAAAGAGATACAGAGAGAAAGAGGGAGAAAAAAGAAAGAAAGAGGGTAAAGGGAAAGAAACGAAGGAAAGAGAAGGGTAGCGAAAAAGGAAGGGGGAGAGAAAAGTGAGAAAAGCAGGAAGAGAGGAAGAGAGAGAGAGACTGTAAGAGAGGCTGTGACCAGGTGCCCTGGCGAGCTCCCTCCCTCTCTGCGCAAACCTTAAAAAAAAAAAAAAGAAAAGAAAAGAAAAACGTATCCACCACTTTCTGATTTAAGGCGATCGCCGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAGTGTTGCCTAAGCCTGAGGAAGATAAAAAGTTTTTTGAACAGTGGAGATTTTAAAACAGACTGCGTGCACAATATGCAGAGCGCGCTCTTTGGAGAAAACCCCCTCAGGGGGGTCTCACCCAGGCTAAGAAAAAAGCGGACCGGTAAGGGGATTTAGCAACAATTTTAACCCCTGACTTGTGGTTGCTCCCATTCCAATGGGAGTGGCTGGCCCCCTGCCTGAGGGCATTGTAGGACTTGTGCTAGGGTGTAGCTCGCTTTCTTTTCAAGAAATTTCGGTGGTATATGGTGTGGTAGATTCTGATTATATTGGAGAAATTATAGTTTTGATCTCGCCGCTTACCAAAACTGTGCAAATTAATAAAGGTCAAAGAATAACACAGT TCONS_00002401 TCONS_00002402 TCONS_00002403 TCONS_00002405 . 3' 27200 TCONS_00002401 TCONS_00002402 TCONS_00002403 TCONS_00002405 . 3' 30031 EMBV3_38094 AACGGACTGAGTTGGTTACCTGGAGTAGGTCACGGCCAAACTTAAGCGTTCAGTTCTGTG Gene BVT0102_373371 - 1 EMBV3_28678 GK000004.2:113105072-113127505 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25430 ATCTACATCAAGCACCCACACCTCTTTAAGGCCTACCTTCTCATTGAGGAGGACATCCGG Variant GeneID:505524|DNTTIP1:NM_001098876:877_cdna 764^835 2 EMBV3_28074 GeneID:505524 13 GENE DNTTIP1 MGC166131 deoxynucleotidyltransferase, terminal, interacting protein 1 EMBV3_37487 TCTACTTGATGCCATGAAGCATTCAGGTTGGTTCGAGCTGCTAACCTTAGTGGAGACTGC Variant GeneID:514014|XRCC6BP1:XM_002687554:566_cdna 418^637 2 EMBV3_00904 GeneID:514014 5 GENE XRCC6BP1 NULL XRCC6 binding protein 1 EMBV3_11707 GGGCTCCTGGGTAGTGGCCTTTCTGGATGCACTCATCAACATTCTCCTGGCTTTGGATTT Gene GeneID:507383|LOC507383:XM_002687332:165_cdna Constitutive 0 NULL GeneID:507383 5 GENE LOC507383 NULL similar to hCG2044662 EMBV3_41019 GTGGTTGAGTAATTTTCCCAAGGACAAGCTGGCAGACTGTTTCCAGAGGACAGCCAAGAC Gene BVT0102_015601 + 0 NULL GK000015.2:46116526-46287138 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059292 TCONS_00059291 TCONS_00059294 1 XLOC_036303 NonCoding TCONS_00059292 XLOC_036303 NonCoding NonCoding - 15:46116914-46119889 - TSS44491 853 1 TCONS_00059292_3 131 0.474794841735053 3 0.714189643577673 0 0 0.00098204310394569 2.97945184047336e-11 0 0 9.53273132937223e-05 1.72669969516387e-05 0.00019421278721039 0 0 0 4.21266950275691e-11 0 0 0 0 0 6.05124233639646e-05 0.0003006722783703 2.37296065079197e-12 0 0 0 4.14390104929736e-05 0.000184101257856623 2.47842436915646e-05 0 0 0 XM_005210426.1 IARS PREDICTED: Bos taurus isoleucyl-tRNA synthetase (IARS), transcript 5e-17 93.3 69.81 0.225087924970692 NR_038877.1 LOC286189 Homo sapiens uncharacterized LOC286189 (LOC286189), non-coding RNA. 6e-22 109 70.45 0.270808909730363 0 noncoding 0 0 0 0 -0.389439466093796 0.0987322535944414 -0.00326196420937991 0.944192313865022 GGCGCTCGCGGGCTCCTAGAGGAGCGCGGGACTCGGTTCGGGACCTCGCGCTCAGAGCGACCGCGCCCAGGTTTGGAGCTTGTAAGCGAGTGCGCGCTCCGTCCCGAGGCAAACCCACACCTTCTCCCATCGCCCCTCGCCGCGGGAATCCAAAGCACGTTCCTGGATGCTTTGCGCGAAAAGGAAAGAAGAACTGAAAAATGGGAGAGAGCTTTACCATTCAAAATGTGGCTTGACAAGGATGAGATTGAAAGTAGCAATCAGAGAAGAGGAAAATCTGACAGAGGGGAGTCATGGGCCAAAACAAAGGGCACGATCAACAGCATCAACTATCAACAGAATTGGAAGCAAAAAAACTAAGATGTGTCTTTCAGATACAGCAAGCAGTAAAGAAAGTAAAATCAAGTGGTTGAGTAATTTTCCCAAGGACAAGCTGGCAGACTGTTTCCAGAGGACAGCCAAGACCCTCGCTCCCATTCCATACGTCCCCTTGCAATGTGACTTTACCACTCCTTCCACCAAGAAGTGGAGACTGTTTCCCTTCCCCTTGAATCTAGGCTGACCTGTGACTTTTAATCAACAAAATGTGTGGAAGTGACATTCCAGTATCAGAACAGAGGTTGAAATGGATGTGGATAAAAAGAACCCAGGTGCCCTGTTGGTGGGAATGTAAATTGATACAGCAACTATGGATGTTCCTCAAAAAATCAGAGATAGAACTACCATGTAATCCAGCTATCTCACTTCTGGCTATTTATCTGAAGGAAATGAGATCACTATCGTGAAGGAATATCTGCATTCACATCTCCATAGCAGCATATTCACAATACCCAAATCAAGGAAACAATCTAGA TCONS_00061453 r 5' 131 TCONS_00061453 r 5' 131 EMBV3_05473 ACAGAGGAAAAGTCGCCTCACCAAAATGTCCCACTGCTGCGTTAAATGAAAGCCTGGTGG Gene GeneID:513594|CEP55:XM_002698387:272_cdna Constitutive 0 NULL GeneID:513594 26 GENE CEP55 NULL centrosomal protein 55kDa EMBV3_43632 TCCCTTAAAGCTAGGGGACAGACAACCCTCATAGTGCCATCTTGCCTCTTTACCTGGATA Gene BVV0102_234236 + 1 EMBV3_12237 GK000001.2:46863233-47006664 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38016 TAGCCTGGGAGCTTTATCTCAAGATGGAAACCTCTGGCGAGTCCTTTAGCCTCCTACAGC Gene GeneID:508011|TTC26:XM_002686999:3_cdna Constitutive 0 NULL GeneID:508011 4 GENE TTC26 NULL similar to tetratricopeptide repeat domain 26 EMBV3_17574 TCTGAGAGACAAGCCTACGCAGATGTTCCGGATGTTTGGGTTTGGTGCGATGAGCATGGT Gene GeneID:613334|FMR1NB:NM_001102262:32_cdna Constitutive 0 NULL GeneID:613334 X GENE FMR1NB MGC152385 fragile X mental retardation 1 neighbor EMBV3_10383 TGCTTGCAAGGCTGTACTGGGAAGGACCGAGTGAGCTTCCACACCGGCGGAGCTCCAGCT Gene BVV0102_320885 + 0 NULL GK000016.2:66610932-66897437 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048812 1 XLOC_028943 NonCoding TCONS_00048812 XLOC_028943 NonCoding NonCoding - 13:49018692-49019337 - TSS35988 645 1 TCONS_00048812_1 97 1 0 1.05470556467492e-05 0 7.41276963642213e-05 0 0 5.77690039552415e-05 0 4.58505571066637e-06 0.000272178487746958 0 8.87282004216321e-07 8.31556057528012e-06 5.93134807224284e-06 3.16030536889996e-05 3.9436128036391e-05 2.04741304973556e-05 1.28699791788864e-05 2.91754561426782e-05 0 0.000111866731292832 1.68651177652844e-05 5.75244607176062e-06 7.11165666945104e-06 0.000356952247466072 0 0.000255784860341289 3.91475823134471e-05 0 1.75618616030724e-05 5.20440340619046e-05 XR_236255.1 LOC101905928 PREDICTED: Bos taurus uncharacterized LOC101905928 (LOC101905928), 6e-08 62.6 72.52 0.178294573643411 0 noncoding 0 0 0 0 0.0425495311291958 0.704658756308425 -0.00959511421808806 0.842321262614134 CCTGGGCGTTTGGGCTCCCTAGCAGAGCCGCAGCGCAGGGGAACCAGCCCATGATCAGTGAGCTCCGGGCAGTTACTTTGGTCCCAGGTTTGGAGCCCAATGCCCGGAACGCGGGAGAGAAGAGGCTGGCTGCCGGCGGGTGCTTGCAAGGCTGTACTGGGAAGGACCGAGTGAGCTTCCACACCGGCGGAGCTCCAGCTCTGCGCCCAGGCGCGATAGCACAGAGCCCCGGCCGAGAGGCTGCTCTGTGCCGAGCGAGCCTCCCCAAGGCCTGCCCAGCTTCTGGCGTTCGCGCCCGGGAAGGAGCAGGCTGCGGGAGTGTGGGAGCCGTGAGTGGTGCCTGACTGCTGCCTCAGCTCAGCTCTCGCCTTCCCTTCGGACCTAGGAGCCAGGCGTCCTTGCAGAGGGCTTAGGGGCTGGGGGTGTGCACACTGCCAAAGCCTCCCTCGGGGAGAGCTCTTTCCGAGGGAAAGGAAGCGCCCCAGGCTGCATTCCCAAGCTGGTGCTTCCCCGCCCAGACTAAGCGCCGCACGGAGGGAATCAGGGTCCCGGTGCCCCTGGCTTGGGGAGGCAGCTCCACAGCCAGAGTGTTGCTCCGTTTGTGCCCAGAAAGCGCCTGCCAGACCGGGCCTTCCCTGGAGCTGT TCONS_00045373 . 5' 339981 TCONS_00045373 . 5' 339981 EMBV3_08138 CCGGGAGGATGGACTTTCCTGTTCATGTCTCTATAGGGTGAGTTGCTGGGGAACTTTCCA Gene BVV0102_088698 + 0 NULL GK000030.2:14585744-15004975 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15739 GCTACCATAGGTTTTCCTCCTACAAAGAGCAAAGGAGAGTGGTGGGAGATACATCCTGCC Gene GeneID:100336613|LOC100336613:XM_002689855:55_cdna Constitutive 0 NULL GeneID:100336613 8 GENE LOC100336613 NULL hypothetical protein LOC100336613 EMBV3_39895 CCTCTCCCTGTCCTGCTCTGATATCTCCAGAAACCTCATTGCCTTGCTCTGTTCCACTCT Gene GeneID:505250|LOC505250:XM_002687334:171_cdna Constitutive 0 NULL GeneID:505250 5 GENE LOC505250 NULL similar to hCG2044662 EMBV3_21702 GAGGATAAGGTAATTTGGGGCTTTGAGACCTGCTCTACAGGACATTGTGAGGATCAAATG Gene BVT0102_007163 + 0 NULL GK000008.2:9870026-10002971 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226900 TCONS_00226899 TCONS_00226901 1 XLOC_138109 Coding TCONS_00226900 XLOC_138109 Coding Coding FZD3 8:9995280-10091176 j TSS169516 9806 2 TCONS_00226900_3 197 0.075769936773404 8 0.897825746910684 0.000620185991151855 0.000548117811505843 0.000117605976047229 8.61094701254635e-05 2.86428805864705e-08 0.000177198916521786 0.00016325456775867 0.000509639701790664 0.000379586606124445 1.33898227165782e-08 2.89558456916371e-05 2.03138756460475e-06 1.8545982827404e-06 0.00015873528325471 2.46368995088406e-10 4.57142727584192e-08 5.1800345462306e-13 6.71943594081307e-05 0.000258883599618213 0.000230287605967006 0.000134038700319484 0.000276939280997371 0.00021905260220833 1.09851906825731e-08 0.000483496651878922 0.000351754521884614 0.000352259434774698 5.6746853309667e-09 3.93893897176163e-05 5.42121199030074e-10 NM_001192964.1 FZD3 Bos taurus frizzled family receptor 3 (FZD3), mRNA. 0.0 2021 99.82 0.114623699775648 NM_017412.3 FZD3 Homo sapiens frizzled family receptor 3 (FZD3), transcript variant 0.0 3323 81.17 0.353049153579441 TCONS_00226900_6 sp|Q61086|FZD3_MOUSE FZD3_MOUSE Frizzled-3; 6e-138 405 100.00 0.994871794871795 1 coding 0 1 1 1 0.0521214850319535 0.750700652064937 -0.0318097222639104 0.623102481459212 CGGTCGCTCCGAGGCGCGCGCCGGCGGTCCTCGCTGGCTCCGTTTACCTGAGGGGCCCGCGGCCGTCCCCGGCCGGCGCCGCAGCCCCCCGGGAGCCGGTCCCCGAGGTGTGAGATATTTCAATCAAAGGAAGAAATAGCTCTTCTCCTAAGATGGAATCTGTTGTTTGGGAATGTGGTTGATCAACTTGACACGTTGGCCAAATGGTACCCGATGTAATAAAATGAAAAGAAGAGGCAAGATGATGTCATTTTCCCATATTGTGAAACCAAAAACAAATGCCTTTTGTGAGACCAAGCTAACAAACCTCTGACGGTGCAAAGAGTATTTCTGTTTGAAGAACTTAACAGTAAGATAGAAGAAGTACTTTCAAGCTGAGACCTGCAGGTGTACAAAGATCTAAAATACATATTGAGTAGGCCTGATCATCTGAATCTCATTCAATCAAGAAAGCATGGCTATGAGTAGGATCGTCTTCTATCTGTGGCCCTTGACTATGTTTGTGGGCCATATAGGTGGGCACAGTTTGTTTTCTTGTGAGCCTATTACCTTGAGGATGTGCCAAGATTTGCCTTATAACACTACCTTCATGCCCAATCTTCTGAATCATTATGACCAACAGACGGCAGCTTTAGCAATGGAGCCATTCCACCCTATGGTGAATTTGGATTGCTCTCGGGACTTCCGGCCATTTCTCTGTGCACTCTATGCTCCTATCTGTATGGAATACGGACGTGTCACACTTCCCTGCCGTAGGCTCTGTCAGCGGGCTTACAGTGAGTGTTCGAAGCTCATGGAGATGTTTGGTGTTCCTTGGCCTGAAGATATGGAATGCAGTAGGTTCCCAGATTGTGACGAGCCGTATCCTCGGCTGGTGGACCTGAATTTAGCTGGCGATCCTACTGAAGGAGCCTCAGTGGCAGTGCAGAGGGACTACGGCTTTTGGTGTCCCCGAGAGTTGAAAATTGATCCTGATCTTGGCTATTCCTTTTTGCACCATTCTGTATCTCGTACCACTCTTGGTTGTAATTGGATGCTACTTTTATGAGCAAGCTTACCGAAGCATCTGGGAAACAACGTGGATACAAGAACGCTGCAGAGAATATCACATTCCATGTCCATATCAGGTTACTCAAATGAGTCGTCCAGACCTGATTCTCTTTCTGATGAAATACCTGATGGCTCTCATAGTTGGTATTCCTTCCATTTTTTGGGTTGGAAGTAAAAAGACTTGCTTTGAATGGGCCAGTTTTTTCCACGGTCGTAGGAAAAAAGAGATAGTGAACGAGAGCCGACAGGTACTCCAGGAACCTGATTTTGCTCAGTCCCTCCTGAGGGATCCAAATACTCCTATAATAAGGAAATCAAGAGGAACTTCCACTCAAGGGACATCCACACATGCTTCTTCAACGCAGCTGGCCATGGTGGATGACCAGAGGAGCAAAGCAGGTAGTGTCCACAGCAAAGTGAGCAGCTACCACGGCAGCCTCCACAGGTCCCGGGACGGCAGGTACACTCCCTGCAGTTACAGAGGAATGGAGGAGAGACTACCTCATGGCAGCATGTCACGACTTACAGATCACTCCAGGCACAGTAGTTCCCATCGGCTCAATGAACAGTCACGACATAGCAGCATCAGAGATCTCAGTAATAATCCTATGACTCACATCACACATGGCACCAGCATGAATCGGGTTATTGAAGAAGATGGAACCAGTGCTTAAATCGTCCTAAGGTGGAAATTTTGTGCTGTTTAAAAAGCAGATTTTATTCTTTGCCTTTGCATGACTGATTGCTATAACTCAGTTATGATGCTTTCAGTCAGGTGCAGATGGTGTCCATTGAAAAGTAAATTTTTGCTTTTTATATTGCATCAAACTTGGAACCTCAAGGCATCCAAAATGCTAAGAATGATATCATCACATAAATAATTCTTATTTCTAGGTTATGAAGAAATAATTATTTGTCTGGTAAGCATTTTTATAAACCCACTTGTTTTATATTTGGAAAAATCCTAAAATGTATGATGACTGCTTTATAGTGAACTTTCATATAATATCAACTGGTTGTGAGGTAACATTCTGGTAGTTCTATTAATAAAACAAAATTTCAGAATTAAAGAAATTTTCTATGCAAGGTTTATTTCTCAGATGAATAGTAGGACTTTGTAGTTTTCTTTCCACTAAGTGAAAAAGAACTGTGTTTTTAAACTATAGGAGAATTTGATAAATCAGCAAGGGAATTTTAGCTAATAGAATATAAAGTCAACTGAAGAATCTGATTAGTCTACTGAAGACTCTTTTGAAATTCTGTCAAAATAGTCTTTATGCAGAGAAATACAGGAGTAGGATTAGCAACAAAGTAAAAGCGGAGATGGGCATTTTTTTCTCAGTAATTGTGCTGTTTTTATTACTTTTGTAAATATTACTTTTACTGGCTGTGTTTTTATATTGGTAACTTATCCATATGCATGACGGAAAATTTTTACTTTTAGCCATTTTTTCCCATGTAGTAGTATTGATTTGTAGAGAACTTCATGTTCAGATATGTTCTATGGGAGCATGTAATAAGATAAGCATCACATACTGTAAGCCTTTTTGTAGTAACCATAGTTACAAAACAGCAAAGTGTTTCCTCTGTATCTGTTATTGTGTTTTTTGCAGTGAAATGTAATCTTGCCAAAGCCGCCAGATGTTGGTATCCAGGCCCCTCGCATTGCCCAGTAGCCAATAAGCCGCAGCTTTTGCCCCACACCTTTATCTTCAGGTTCTGGGTCATTCTTGTTTACAGCTGAAATATATGTATAACCCGAGTCCACAGTGGTGATTAATTTGGGATATTTGAAATTCATTGTAGCTTAATGAAGCATGATTAGTCCTGCTGTGAAGTTATCTTTTAACTTTAAAAATATCAATTCAAAAATCTTTGACATTTTGTCTTGTAATATTTAAATAACTTATAGTAAAAATTTTAAACTTTATTAGGCATGATAATGATCGGAAGGGAAAGAAAAATTCTGGAAAGTGCTGGATGTGTTATATAGACAAGCATATTTAAACAAGCCATCCTCAACCCTGACTACAGATAAGAATCACTCGGGCAATGCCCAACACCTTCTTCTCATTGAGATGAGGACTGGTAGTTTTATAAAAAGCTTCCCCAGTGATTCTAATCTGCCGCAGGCCTGACTGCAGGCTGTTTGAAACTAACTTGCTCCTGCTGATAATGTGATGGCATCATATTATATCATGTGAAAACCTAGCTGCACTCAATGTTAGGCTTTTATATCTATTACCTGATTGATTACAACTGGAATTCTGGACCCCACTCCTAAAAATTAGTACTCAGTAAGTCAAAGGTGATGGTAGGACTTTAAAAATCTGTCATCATAAAAATATTAATATCATAGGTGATTCTTATACAGATATCCAAGAATCAGACTTTAAAAATATTCTAGACTCCAGAGAGATCTGGCTTTGCCATGTGCTAGTTTTTGACCTTTTACAAGTTAATTTCTCTGAGCCTCAGTTCCCTTGTTTTTGAATGAAGATAGAAAATAAATACCTACCTCACAAAGTTGTCAATAGGTATCAGATGAAAAATCATATGAAAGCTGAAAGCTCTGAAAACTTTAGTGTTATGAACTAGAAGGGATTAAGATTACTGAGGACTTAAGATATTTGTCTGAGGGCTACCATAGTACAGTCTTTGATATGTGTTTGAATTCATGTGGACTTTTTCCTCTCCTTTTTTAAAACAAAATGTACCAAGAAATTTGGTGTTGGAAAAGCTTTCATCAGGCACAGAAGTCAGTTTTCTGATAATAATTTGTTTGCCTGTCATGTTTTTTTCTTTCAAAGTACATATTTCTTAATATTTATTACTAATTCTTCATGAGATATGTGAACATTTGGCTCAAATGCTTTACTTTTTCCTCCATCCTCATTGTCTTTTTCCTTGAAACTGGAGTTAATACTCAGGACAAGTAGAATCTGAATTCCCTCACATCTGACAGTAGACCTTTACTCTGAAGATCAAATTGGTAACAACTCATTTATAAATAAATCAGTAGTTCATGAGGCTTTTGTCTGAGAATTTCTCCTGAGAACAGCATGAAAGACCAAAACAAACATTCAGACACAAAAATAAGTTAACATAGAAGGTACCAGTTTGAGCTCAAAGATGCTGTCGTTCATTGCCATCTGCATTATATCATCAATTGCCAAAATGTTAATTGGTTTCTTTGTGGGCCAAGTATAGACAGTTAAGTGAACATCAATATGAAAAGCTTAACCCTGTGCTTCCTGATTTTTAAATATTCATTTGTATCTTCTCTATTAAACTGTTGATATATGTGTAAATGCTTTATTGGCCTTTCAGTTACTTTCACTGCTTCACAGAATTTACTTAATATTGTTAATCTGTCATTTTAAATAACAGTATTTAGTTTGGGTTGTGTTATTTATCAAACTAGTGCTCCGAATTAAGACTTTTTTCATTAAAGAGACAATCGAAGAACTACAGCAAAATAACAGTTTCAAGTCTCAACTAGCTTAAACCAACTTGAACAAGTCCGGACAGCTTTCTTACCATATGTTTAATTTGTGTTGTGATTGGCAGATGATAATGTTTAGTATTTTATTTTTTCAGTTGACAACTGATAAAATAATAGTTCTCTCTAAAATGTTAACATATCCAAGTTGATTCCCTCTTCCAAGGGGCCTACTAGTGCCCCTCTTCAGGAAAGTAGCAACTTGGAATAAAATCTGGCACGCCTCAGGCTTCTGAGGAAAAGGGGGTGTTTATTTCCTTTGCCTGCCTTTGGCTGCCTACATGTATGGTTAAAAAAAAATAAAATAAAATGTTAACATATAACCAAAAAGTTTTCGAAAAGTACTCTGATTTCAGCAATATTGTATTGAATTTTTTCAGTGATTAAAGCAAACAATTCAAAACAATATTAAGCTCAAAACAATAATTAGTTTCAAAGAACAGTTAATAACTCAGCAACTAGAAGAGGGCATGGTAGGTTTTCAATTAAAATATTTAAATAAATGAATGTTATGCAACTCACTTTAGTCATGATAGTCTCAGTTCAAAGAAATTTGAAGAGTCTAAATTTGAGCTAAGTGAAATGAGTCTCTGCTTTACCGGAATAATATGTGGCAAGTAATAATCAATGAGGGATTTCCCTGGTGGCTCAGATGGTAAAGCGTCTGTCTACAATGCAGGAGACCCGGGTTCGATCCCTGGGTTGGGAAGATCCCTGGAGAAGGAAATGGCAATCCACTCCAGTACTATTGCCTGGAAAATCCCATGGACAGAGAAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACATGGCTATATAATAATCAATGAATTGCACCAAATAAAGTTTATTTCTCCTAGAGTAACAGTGCATATTACTATTTTAATTAAATATATATACAAACTTACGCTAACACTTTATATTAATTTTAGAAGATGAACAGCAGTTTTTAGAAGTAAGTAGGTTCTTGTTGGTTTAATGTGAAATTAGATCTTTGTATACTAGTTGGGTGAATGAATATTCAAGTAAACCTTTATTAATAATGATTTTCTTTTTCTAAAACTGTTTCTTGGAGCAGATTTAAGAAAATTCTAAGAATCTCTTCAAATGAGGAAAATTAACTACATTTTAACCTACCTCATTAGTTTCTTTGTGATAATAACTGGAAATAACTGAAGTTGTAACTTTATTGGTGTGGACTATATCCCCATGAAATAAAAGGAACTACTTAAAAATTTTTGATAAAATAGTGGATCATTGGCTGGAGCTTAGAAAATGTTAACATACCAAATTTTCACTATGATGATATTTATATTCCTTTTGACATGCCAAAGGTATGTTTATATATTATCATACTTGGATGACTAACATAGTCTAGTGTAATGAAAATTGCCCTGGGCTTGGAATTCAAAAGACCCATAATAATGATGTAAACTGAACAGGTCGTTTAATTTCTCTTTGTCTCAATTTCTTTGATGTAAAATGAGGATAAGGTAATTTGGGGCTTTGAGACCTGCTCTACAGGACATTGTGAGGATCAAATGAGCTAACAAGAATTATAGTGCTCTTTAAAAAACACTGATAGAAAAAAAAACAAAAAAACACTGATAGTATTTGTTTTTGTTAGAATTTGGGGGTTACAGAAAGCAAGCATAATGGTATTGAGCAGTAAAAACAGAACAGGCAGTTAGGCCAGTATTCATTTGACACAGTCTTCAAATCAGCAATCCAATTGACCCTTTAAAATGAGATTCTTTTTCGAGAACGACTGTGCCCTTAGATTGTATTTGGCCCTTTATTAAATGTTATACCAGAATATGCTCCGAAAATTTATATGGTTGAATTTATAGGTCACTTTCAACAGAAATTTGGGGATATCCATTATATGTCTGCTTTGATATGGAATGATATAACTACATTAGTTTTGCAAGAAAAATATAAAGAGAAGTAGGCCCTGTTACTTTTTCTCCTTTGAGGCCTTTCATATGCCTAATTACTTCCAATTAGGAACACTTCTTTTTTATTAGTGATTACTGTAACTTATTGGTTTTCATCATGGCAAAACTTTAAATTTTAAGTGATACTATTATATTTGTATATGTAATTTTTTAACCTGCATAAAGTAAGGGTTTCTCCATTCTTTTTCACACATAAACACACAAAAGGGCATTTTTTATAGAACCTAGAGGTACAAAGGAACTCACGATTCTTTTAAACTACTTTTATGCCTTTTTACAACTGAGTAAAGAAAGGTGTTTAATTCAGCTATGTTTCTTAGTAGCTGTATGATTTTATACATTATTCTTGTGTCATTTTTATGTTTTTTATGAAAAAATTATGTTGACATCTCTTCATATTTTAATTCACTTCAATTCTGTTTTGCTCCAATGATATGATTTTTGAGAAAGGAATGGGAAAACTAAGCAACCTTTACCTCCATCTTATTGTAATTACTCTCCTGGATTTTTTCCTAATTTAAATTCTGTACTTCCTTAATAGCCAAATTGATAGGATTATAATAATTTCTCTCAAGATCTGAAGTCTTCTGGGAAAGAGAATATTAAGGTTTATCCAGAACCAGCCATTTTTGTAGACATTCCTATTTGGTTGATTTATAAAGATTTAATACAGTAAGTTAATAAGCATATTTCTTATTCTGTGATCTCTAATTAGAAAGTAACATTTTTGTTGCCATAAAGTTAAAAAAAAGTAAATTTTCACTTACATTTTAGTCAAATCCCATGCCAGTACATTACCTCCTATAAAAGAGAGTAGTTCAGTCTATTTAAATGTATTAAGAATGGTTTCCTTTGGAATTTTTTTTGTTTTTAATAATCACTTTTCTCAGGAAATCTGTTATGTCCTTTCTTGGACATTTTCACTGGTGTGATAGCATTGTTTATAATTCTTTTTTATCATTTCATTGGTCACTGTCAGCAGTTTTTCCTGATCAAGAGAAGCAAGTATTTACCTTAGAGTAATTCAGATCTTGAAAATTCAGTGTTTTGTTATTTTCATAATTATTGTTCATTAATAACATTAATTTTTATTAGAGTGATTTTTTTCCAAGCTTTTTATCATATTTCCTGCAGTACGGTGAGCTATATTTTTATTATAGCCCTGGGATTTTTGTTACGTAAGTCAGCTTGTTTGTATTGCTGACTTGCAAATATTACTTTAATTGTGTTGACATGCTATTGACATAAAAGAAAGAACTTTGGAGCTTAATAGTTTTTTTTTTCTAAATTGGCAGATTTTTTGAATGCTTAGTAAAAATACATTATGTTAGTTTTTAAATCTGACAGAACTTTGTGTCAGAGGTCTGATTTGTAGTGTTGCATCTGTTTTCAATGAGCTGTGGAACTTTGCAATTTTATCTCTTGGGACCTCAGTTTAACCATCTGTAAATGAAAGAAAAAGGGGATTAGACCAGGTCGTGTCTCAGATTCCACCTGTCTCTGGTTTGGTTATCCCTTGACTATTTTATAATCATTATCTTATTCTCGTTATTCCTCCCATGAACGCTATATACTAGATCAGCCTGCAATGTTAATGCAAGTTGCACTTAAATTGATAGGATTCAGCTATGTTGCTGATTTTGTTTTTCAGTCTTGATTTTAGGTAATTTTAAAGGAGGAAAAAATTATATTACAGATTGTAAAAGTAAAAAAAAGGTTACAAATAATCGACATGACCTTTTTTCCTCCCAAAGGAAATATCTCCTAAGGAACCAATATAAGCACCTTAAAACTGATGTACAGAAAAAAATAACATCTAAAATTTTTGTGGTCTTTGTTCTCTTAAATATGAGCATAGCTACTTAGGCTAAACTTTTAAACAAAATGTATTAAGATAAAATTAGTAAACAAAGCATATAACAGTTATATGGCCCATATAACTAATTAAAAAGCTATTAGGTTTGCTGACATGAAAATATTTATAAAATATAAAAATAATTGAGGATTGGATTGAAATTTGTCTGTTCAGTAATTACCCGTAAGCTGAAACCTTAGATTCTTTGCATAACTACAGTTGCCAGATTGCCACGAGCAAGTGAATATCCTGCTTTAAAATATCCTTAGAGATAAATGTGGTTTCTTTGTTTTATTTTTTTCAGCTCTGCAGAAGATGTTTCTGTAAAGCCTCCTTCTGTAATAAAATGTAGAGATTCTATTACTTCCGTCTCTCGACAGAGTTCTCTTGTAGATTTATTGATAATTACATTGTCTGAGAACCAGGCCATAGAGGTTCCTGTTACACTTAAAGATCATTGTCTTTGTTCTAATTGTCTTCCTTAACTCCTATCAATCTCTTGAATCCTTGGTCTGTAAATTTACAATCTAGGTACTGGGTTTGGTGTCTGGTGGGTAGAAAAGAAAAATGGAAATTGATACAGGAAGGTGCACTGGTTTCTGATGTAATTTGTTTGGCTGTACTTGATTCCTGTCTTTGGTCAGTTCACTGGTTCAGGCAGCTCTCCTGACATCCAAAAGTTCAGTTAGATGCCCAGCGTCTCTCACTCACATATTGCTATATTACAGTGTTACATTAACCACCTGTTAAGAACTACCACCACGACTTTCTTTTCAGTTCTCTGACTCTGTGTGTTTTGCTATTATGTTTGTTAAACCTTGAGTCTGAGGTCTAAACATTTCATTGAGTACTTTCTGGGTTTTGATAATAGGATATTCTATAAGGTAAAACAGATAATCCTAGGGTGGTTTAATTTATATTTATCCATCCACCATTTTTCTGTTTTTCTAACTGACCCCTCCTCAGTTTTGAAAATTAAGTTTATAAATATCTTCCGTCTCTCCTTTAGCCCTGCCTCAGATAATTTTTCTTTGAACTACTCTTGTTGGCAGAAAGGTTTAATATGGAATAATTCTGTGTTTCTGAGACAAGATCAACACAGTAGTTCTTTACATTGAGCTGAGGTGAACATGTATTTGAAATTGTTGCAGTTTCTTTACATGTGAACTTAAAATTAATTTTTTTAATCATGAAAAGGACTCTCTGATTTGAAAACATTAGTTTGGAAGTTCTCTTGTTATCAGGTGCTATTTCTACCTTAGCTGTGAATTATCATAATAAATCTGAATTCTTTATCATTCATCTTTTTAAAAAAGTTAATGCCTCTCGAATGATCCCATTTCACAAATCTTTTTTTTCCACAAATCTTTAATACCAACTTCAAACAACTTCTCTGTTTTTATTTTCAAATGCCAGACT EMBV3_24718 GGGATGGATCTATATGCTTAACACCAGGCTATGGTTAAGTTTAAAAGCTCTTTATGTTGG Gene GeneID:100336279|LOC100336279:XM_002685744:494_cdna Constitutive 2 NULL GeneID:100336279 2 GENE LOC100336279 NULL hypothetical protein LOC100336279 EMBV3_40874 GGACCCTGTTATAGTATCTCAGTGTGCCCCTCTTGTAACAACTCCCAATACTCAGCAAAC Gene GeneID:512002|HIBADH:NM_001046106:10_cdna UTR3_Alt 2 NULL GeneID:512002 4 GENE HIBADH MGC128999 3-hydroxyisobutyrate dehydrogenase EMBV3_30326 AGTATCGTGGTGTCATGTCCACGGGATTGTTTCTGGGTTTTTCCAGAGTCCACTGTCTGC Gene GeneID:536970|SLC9A4:XM_002691184:89_cdna Constitutive 0 NULL GeneID:536970 11 GENE SLC9A4 SLC9A2 solute carrier family 9 (sodium/hydrogen exchanger), member 4 EMBV3_36673 GACAGATATAGAGGATCTTTTCAAAAAAATCATCAACGAGATCCTCGACTGAATGAAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05847 GGATAAGACACCGCATCCCCTCCAATTCCCCCTGCTGGAAAAGCTCAGAGGTCCTGTCCC Variant GeneID:524639|PHOSPHO1:XM_002695905:246_cdna 160^292 2 EMBV3_20275 GeneID:524639 19 GENE PHOSPHO1 NULL phosphatase, orphan 1 EMBV3_22679 GTTCTTCTTCGTCCAGTTCATCCTGCCCTTCGGCCTCATCCTGTTCTGCAGCGTGGGCAT Gene GeneID:617303|GPR31:XM_002690393:14_cdna Constitutive 0 NULL GeneID:617303 9 GENE GPR31 NULL G protein-coupled receptor 31 EMBV3_25754 CTGTCTCCTGTACAATGTAACGAACCTCTGTCCATAGTTCATCAGGCATTCTATCAGATG Gene BVV0102_057907 - 1 EMBV3_11356 GK000001.2:109793740-109821735 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029913 TCONS_00187209 TCONS_00056175 TCONS_00011179 TCONS_00250571 TCONS_00131163 TCONS_00063565 TCONS_00187531 TCONS_00031707 TCONS_00220694 10 XLOC_016168 XLOC_113257 XLOC_033978 XLOC_006730 XLOC_153514 XLOC_079868 XLOC_038292 XLOC_113576 XLOC_017954 XLOC_134011 Coding TCONS_00250571 XLOC_153514 NonCoding NonCoding - X:42149252-42150324 - TSS187792 1072 2 TCONS_00250571_2 72 0.998134328358209 1 0 0 2.93515809090232e-06 0 0 4.60558556696914e-06 0 0 0 0 3.83814493347743e-06 0 1.66776396838784e-06 0 1.31641845509755e-05 6.53810936032908e-07 1.23188112013123e-05 0 0.0059866563766667 0 8.856862846693e-06 2.57440136578403e-07 0.000107006674287432 1.7115755026956e-05 2.64435297952886e-05 0 1.64306614491543e-06 0 3.13602006021184e-05 4.11686306176024e-05 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 690 88.80 0.472014925373134 0 noncoding ATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCAGAAATAGATGTTTATCTGGAACTCTCTTGCTTTGTGATGATCCAGCGGATGTTGCCAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAAACCAGCTTGAATATCAGGAAGTTCACTGTTCACATATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCGGTAGTTTGAGCATTCTTTGGCATTGGAATGAAAACTGACATTTTCCAGTCTTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCTTCTTTCAGGATTTGAAATAACTCATCTGGAATTCCATCACCTCCACTAGCTTTGTTCGTAGTGGTGCTTTCTAAGGACCTCTTGACTTCACATTCCAGGATGTCTGGCTCTAGGTCAGTGATCACACCATCGTGATCATCTGGGTCGTGAAGATCTTTTTTTTGCATAGTTCTTCTGTATATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTGTCCTTTATCGAGTCCATCTTTGCATGAAATGTTCCTTTGATATCTCTGATTTTCTTGAAGAGATCTCTAGTCTTTCCCATTCTGTTATTTTCCTCTATTTCTTTGCATTTTTCGCTGAAGAAGGCTTTCTTATCTCTTCTTGCTATTTTTTGGAACTCTGCATTCAGATGTTTATATCTTTCCTTTTCTCCTTTGCTTTTCGCTTCTCTTCTTCTCACAGCTATTTGTAAGGCCTCCCCAGACAGCCATTTTGTTTTTTTGTTTTTCTTTTCCATGGGGATGGTCTTGATTCCTGTCTCCTGTACAATGTCACGAACCTCATTCCATAGCTCATCAGGCATTCTATCAGATCTAGGCTTCTGCTGTGTTACTGGTTGGGGCATAGAGTTGCATTACTGTGATATTGAATGGTTTGCCTTGGAAACAAACAGAGATCATTCTGTCGTTTTTGAGATTGCATCCAAGTACTGCATTTCGGACTCTTTTGTT TCONS_00246921 . 5' 18228 TCONS_00246921 . 5' 18228 EMBV3_03118 TATTTGACACGGGCTTGCGGGACGTGCAGCCCTACCTCTATAAGATTTCCTTCCAGATCA Gene GeneID:513049|ATG101:NM_001046134:3_cdna Constitutive 0 NULL GeneID:513049 5 GENE ATG101 C12orf44 C5H12orf44 MGC128883 autophagy-related protein 101 EMBV3_02310 TCCAGTGATAATCCCTTAGTAATTAAAAAGTTCTGGAAAAGCTGTGTAACATTTTACGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21230 GCATGGGCTTCCGACGCCTATAGCCCTCAGAAATCTGACGGTGTGCCCATCCACCTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33563 GCCCATAAGAAGAGCTAAGTGAAGTGGACATAAGCGACCTACCCAATAAAGAACTCAAGG Gene BVV0102_274653 + 0 NULL GK000030.2:37994023-38157930 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03043 AGTGTCTTCTAAGGAGGTCCGTCCACTCCATGTCTCTCCTAAGTCTACCACCTGCTTCCT Gene BVT0101_031289 - 1 EMBV3_03844 GK000013.2:68097052-68119516 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27003 CAGAAGAGTACTGTGTGTTGGGACCCCAAGGTATTCACAGTTTTATATGGAAGATAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39407 GCTTACGGTGAACAGTATCAAATTCATGATGGACCAGTCTTGATCACACAAGAGCTTCTG Gene GeneID:100295746|LOC100295746:XM_002690034:28_cdna Constitutive 1 NULL GeneID:100295746 9 GENE LOC100295746 NULL hypothetical protein LOC100295746 EMBV3_25192 CATCTGTCGCTGATGACCAAGGAGGAACTCAGTAAGACGCCTGAGAAGCAGGGGTATGAA Gene BVT0102_025577 + 0 NULL GK000019.2:13731213-13752491 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095210 TCONS_00095216 TCONS_00095217 TCONS_00095214 TCONS_00095215 TCONS_00095211 TCONS_00095218 TCONS_00095219 TCONS_00095213 TCONS_00095212 TCONS_00095209 1 XLOC_057670 Coding TCONS_00095211 XLOC_057670 Coding Coding ACACA 19:13750287-13971734 j TSS71059 9347 1 TCONS_00095211_8 2346 56 0.958043947508648 0.000698363974362731 0.000202515196384575 0.000821192405668944 2.52413952586909e-05 0.000228790206059658 0.000315789833568493 5.75630754965629e-11 0.000217357922097743 1.48771611313459e-05 7.28562325162743e-05 3.77223203017772e-75 3.42967578249285e-06 1.11103367297444e-74 1.53533869933079e-101 1.96625099227712e-13 0.00523520928046233 5.83683814117751e-10 0.00122643254708655 3.42262085331374e-25 1.44912830495346e-26 0.000125107463475937 0.00172760815646858 0.000833267848623768 0.00213868265605013 0.0007101423512084 5.22328430040001e-41 0.000528123102116249 0.000416561346441703 0.000215295758257628 0.00126014635889779 XM_005219975.1 ACACA PREDICTED: Bos taurus acetyl-CoA carboxylase alpha (ACACA), 0.0 1.576e+04 100.00 0.934845404942762 NM_198839.1 ACACA Homo sapiens acetyl-CoA carboxylase alpha (ACACA), transcript 0.0 1.010e+04 90.97 0.774366106772226 TCONS_00095211_8 sp|Q9TTS3|ACACA_BOVIN ACACA_BOVIN Acetyl-CoA carboxylase 1; 0.0 4874 99.74 0.999573742540494 9 coding 0 0 0 0 -0.789882182712922 0.0656522130819438 -0.0215727575358273 0.691356455559653 GCTTAGTGACTTGTTCCGGTGCGCTGCCATTCTTTTTGGAAGTGGATATCTGCTCAGACAATAAGAATTATAAGAGCTCTGAGAGCTCATTTTGAAGAAGCAATGGATGAACCTTCTTCCTTGGCCAAACCTCTGGAGCTGAACCAGCACTCCCGATTCATTATTGGCTCCGTGTCTGAAGATAACTCGGAGGATGAGATTAGCAACCTGGTGAAGCTCGACCTGCTGGAGGAGAAGGAGGGCTCTCTGTCGCCAGCCTCGGTCAGCTCAGACACGCTCTCTGACTTGGGCATCTCGAGCCTCCAGGATGGTCTGGCCTTACACATGAGATCCAGCATGTCTGGCTTGCACCTAGTCAAGCAAGGTCGAGACCGAAAGAAAATAGACTCACAGCGAGATTTCACTGTAGCCTCTCCAGCAGAATTTGTTACTCGTTTTGGTGGGAATAAAGTGATTGAGAAGGTTCTCATTGCCAACAATGGCATTGCAGCTGTGAAATGCATGAGATCCATCCGCCGGTGGTCTTATGAGATGTTTCGAAATGAACGTGCAATCCGATTTGTTGTCATGGTCACACCTGAAGACCTGAAAGCCAATGCAGAATACATTAAGATGGCGGATCACTACGTGCCCGTGCCAGGAGGCCCCAACAACAACAACTATGCAAATGTGGAGTTAATTCTTGACATTGCTAAAAGGATCCCCGTGCAAGCAGTTTGGGCTGGCTGGGGTCATGCTTCTGAGAATCCCAAGCTCCCAGAACTTCTCTTGAAAAATGGCATCGCCTTCATGGGTCCTCCAAGCCAAGCCATGTGGGCTCTGGGGGATAAGATCGCATCTTCCATAGTGGCTCAAACTGCTGGTATCCCAACTCTTCCATGGAGTGGCAGTGGTCTTTGTGTGGACTGGCACGAAAATGATTTTTCAAAACGAATTTTAAATGTTCCTCAGGAACTATATGAAAAAGGTTATGTGAAGGATGTGGATGATGGGCTGAAGGCAGCGGAGGAAGTTGGATATCCAGTAATGATCAAGGCCTCAGAAGGAGGAGGAGGGAAGGGAATCAGAAAAGTCAACAATGCAGATGACTTCCCTAACCTCTTCAGACAGGTTCAAGCTGAAGTTCCTGGGTCTCCTATCTTTGTCATGAGACTAGCCAAACAGTCTCGTCATCTGGAGGTGCAGATCTTAGCAGATCAGTATGGCAATGCTATCTCTTTGTTTGGTCGTGATTGCTCTGTGCAACGCAGGCATCAGAAGATTATTGAAGAAGCTCCTGCTGCTATTGCTACTCCAGCAGTATTTGAACATATGGAACAGTGTGCGGTGAAACTTGCCAGGATGGTTGGTTATGTGAGTGCGGGGACTGTGGAATACCTCTACAGCCAGGATGGCAGCTTCTACTTTCTGGAACTGAACCCTCGGCTACAGGTGGAGCACCCCTGTACAGAGATGGTGGCCGATGTCAACCTCCCTGCTGCGCAGCTCCAGATTGCCATGGGGATCCCTCTGTACAGAATCAAGGATATCCGAATGATGTACGGGGTCTCTCCCTGGGGCGATGCTCCCATTGATTTTGAAAATTCGGCTCACGTTCCTTGCCCAAGGGGCCATGTTATTGCTGCTCGTATCACTAGTGAAAATCCAGATGAGGGTTTTAAGCCCAGCTCAGGAACAGTTCAAGAGCTGAATTTTCGCAGCAATAAGAACGTTTGGGGTTATTTCAGTGTTGCTGCTGCAGGAGGGCTTCATGAATTTGCTGATTCTCAGTTTGGTCACTGCTTTTCCTGGGGAGAAAACCGAGAGGAAGCAATTTCAAACATGGTTGTGGCTTTGAAGGAGCTGTCTATCCGGGGCGACTTCCGGACCACAGTCGAGTACCTGATCAAACTGCTGGAGACTGAAAGCTTTCAGTTGAACAGAATTGACACGGGCTGGCTGGACAGACTGATAGCAGAAAAAGTACAGGCGGAGCGACCTGACACCATGCTGGGAGTTGTCTGTGGGGCTCTCCATGTGGCAGACGTGAGCCTGCGGAATAGCATCTCCAACTTCCTTCACTCCTTAGAGAGGGGTCAAGTCCTCTCTGCTCATACCCTTCTGAATACAGTAGATGTTGAACTTATCTACGAGGGAGTGAAGTATGTACTGAAGGTGACTCGACAGTCCCCGAACTCCTACGTGGTGATCATGAACGGCTCGTGTGTGGAAGTAGACGTGCATCGACTGAGCGACGGTGGACTGCTCTTGTCCTATGACGGCAGCAGTTACACCACGTACATGAAGGAGGAGGTGGATAGATATCGCATCACAATTGGCAATAAAACTTGTGTGTTTGAGAAGGAAAATGACCCTTCGGTGCTGCGCTCACCCTCTGCTGGGAAGTTGATCCAGTACATTGTGGAGGATGGAGGCCACGTGTTTGCTGGCCAGTGCTATGCCGAGATCGAGGTGATGAAGATGGTAATGACCTTAACAGCCGCAGAGTCTGGCTGTATCCATTATGTCAAGCGGCCTGGAGCAGCTCTTGACCCGGGCTGTGTAATAGCCAAAATGCAACTGGACAACCCCAGCAAGGTCCAGCAGGCTGAGCTTCACACAGGCAGTCTGCCACGGATCCAGAGCACAGCGCTCAGAGGCGAGAAGCTCCACCGAGTGTTCCACTATGTCCTGGATAATCTGGTCAATGTGATGAATGGATACTGCCTTCCAGATCCTTTCTTTAGCAGCAGGGTGAAAGACTGGGTTGAACGGTTGATGAAGACCCTCAGAGACCCCTCCTTGCCTCTCCTAGAATTGCAGGATATCATGACTAGCGTCTCTGGTCGTATCCCGCCCAACGTGGAAAAGTCTATCAAGAAGGAAATGGCTCAGTATGCCAGCAACATCACATCCGTGCTCTGTCAGTTTCCCAGCCAGCAGATTGCCAACATCCTAGACAGCCACGCAGCCACACTGAACCGGAAATCTGAACGGGAAGTCTTCTTCATGAACACTCAGAGCATCGTCCAGCTGGTGCAGAGGTACCGCAGTGGCATCCGAGGACACATGAAGGCTGTGGTGATGGACCTGCTGCGGCAGTACCTGCGAGTAGAGACACAATTCCAGAACGGCCACTATGACAAGTGCGTGTTCGCCCTCCGGGAGGAGAACAAGAGTGATATGAACACTGTGCTGAACTACATCTTCTCTCATGCTCAGGTCACCAGGAAGAATCTTCTGGTCACCATGCTTATCGATCAGCTGTGTGGCCGGGACCCCACCCTCACTGATGAGCTGCTGAATATCCTCACGGAGCTAACTCAACTCAGCAAGACCACCAACGCGAAGGTGGCGCTCCGAGCACGCCAGGTTCTTATTGCTTCCCATTTGCCATCCTATGAGCTTCGCCACAACCAAGTCGAGTCTATCTTCCTATCCGCCATTGACATGTATGGACATCAGTTCTGCATCGAGAACCTGCAGAAACTCATCTTGTCCGAAACGTCGATTTTTGATGTCCTACCAAACTTCTTCTATCACAGCAACCAGGTCGTGAGGATGGCAGCTCTGGAGGTGTATGTTCGAAGGGCTTATATCGCCTATGAACTTAATAGCGTACAACACCGGCAGCTGAAGGACAACACCTGCGTGGTGGAATTCCAGTTCATGCTGCCCACATCGCATCCAAATAGAGGGAACATCCCCACGCTAAACAGAATGTCCTTCTCCTCCAACCTCAACCACTACGGCATGACTCACGTAGCCAGTGTCAGCGACGTGCTGCTGGACAACGCGTTCACTCCGCCGTGTCAGCGGATGGGCGGGATGGTCTCTTTTCGGACCTTTGAAGATTTTGTCAGGATCTTTGATGAAGTGATGGGCTGCTTCTGTGATTCCCCACCCCAAAGCCCGACATTCCCTGAGGCAGGTCACACGTCTCTGTATGACGAAGACAAGGTCCCCAGGGATGAACCAATTCACATTTTGAATGTGGCTATCAAAACAGACTGTGACATCGAGGATGACAGTCTAGCAGCTATGTTCCGAGAGTTTACCCAGCAAAACAAAGCTACCCTGGTTGAACATGGGATCCGACGCCTTACTTTCCTGGTTGCACAAAAGGATTTCAGGAAACAAGTCAACTATGAAGTGGATCAGAGATTTCATAGAGAATTTCCTAAATTTTTCACGTTCCGAGCAAGGGATAAGTTTGAGGAAGATCGTATCTATCGTCACCTGGAGCCTGCCCTAGCTTTCCAGTTAGAGCTGAACCGGATGAGAAATTTTGACCTTACTGCCATCCCGTGTGCCAATCACAAGATGCACTTGTATCTTGGGGCAGCCAAGGTAGAAGTGGGCACAGAAGTGACAGACTACAGGTTCTTTGTTCGTGCAATCATCAGGCATTCTGATCTGGTCACCAAGGAAGCTTCCTTTGAATATCTACAAAATGAAGGGGAGCGGCTCCTCCTGGAAGCCATGGATGAGTTGGAAGTCGCCTTTAACAATACAAATGTCCGGACTGACTGCAACCACATCTTCCTCAACTTTGTTCCTACAGTCATCATGGACCCATCGAAGATTGAGGAATCCGTGCGGAGCATGGTGATGCGCTATGGAAGTCGGCTGTGGAAGCTGCGTGTCCTCCAGGCAGAACTGAAAATCAACATTCGCCTGACACCAACTGGAAAAGCAATTCCCATCCGCCTCTTCCTGACGAACGAGTCTGGCTATTACTTGGACATCAGCCTGTACAAGGAAGTGACTGATTCCAGGACAGCACAGATCATGTTTCAGGCATATGGAGACAAACAGGGACCATTACATGGAATGTTAATCAACACTCCGTACGTGACCAAAGACCTGCTTCAATCCAAGAGGTTCCAGGCACAGTCCTTAGGGACAACATACATATATGACATCCCAGAAATGTTTCGGCAGTCCCTGATCAAACTCTGGGAATCTATGTCCTCCCAAGCATTCCTTCCACCGCCCCCTCTGCCTTCAGACATACTGACGTACACTGAGCTCGTGTTGGATGATCAAGGTCAACTGGTTCACATGAACAGGCTTCCAGGAGGAAATGAGATTGGCATGGTAGCTTGGAAAATGACCCTTAAAAGTCCAGAATATCCAGACGGCCGAGATATCATTGTTATTGGCAATGACATCACTTACCGAATTGGGTCCTTTGGACCCCAAGAGGATTTGCTGTTTCTCAGAGCTTCTGAGCTTGCCAGGGCAGAGGGCATCCCACGCATCTATGTAGCAGCCAACAGTGGAGCAAGAATTGGACTGGCAGAGGAAATTCGTCATATGTTTCACGTGGCCTGGGTAGATCCTGAGGATCCTTACAAGGGATACAAATATTTATATCTGACCCCTCAAGATTACAAGAGAGTCAGTGCTCTCAACTCTGTCCATTGTGAACATGTGGAAGATGAAGGAGAATCCAGGTACAAGATCACTGACATTATTGGGAAGGAAGAAGGACTTGGAGCAGAGAACCTTCGAGGGTCTGGAATGATTGCTGGGGAATCCTCGTTGGCCTACGACGAGATCATCACCATCAGCCTGGTTACATGCAGGGCCATTGGGATTGGGGCTTACCTCGTCCGACTGGGACAGAGAACCATCCAGGTCGAAAATTCTCACTTAATCCTGACAGGAGCTGGGGCCCTCAACAAAGTCCTCGGGAGGGAAGTATACACCTCCAACAACCAGCTGGGGGGCATCCAGATCATGCACAACAATGGGGTGACGCACAGCACCGTCTGTGACGACTTCGAGGGGGTGTTCACCGTCCTGCACTGGCTGTCTTACATGCCGAAGAGTGTATACAGTTCAGTTCCTCTCCTGAACTCCAAGGATCCAATAGACAGAGTCATCGAGTTTGTGCCCACGAAGGCGCCGTATGACCCTCGGTGGATGCTGGCAGGCCGGCCTCACCCAACCCAGAAAGGTCAGTGGTTGAGTGGATTTTTTGACTATGGCTCTTTCTCAGAGATCATGCAACCGTGGGCACAGACTGTGGTGGTTGGCAGAGCCAGGCTAGGAGGAATACCCGTGGGAGTAGTTGCCGTAGAAACCCGAACAGTGGAGCTGAGCATCCCGGCTGATCCTGCAAACCTGGATTCTGAAGCCAAGATTATCCAGCAGGCTGGCCAGGTTTGGTTCCCAGACTCCGCGTTTAAGACGTATCAGGCCATTAAGGACTTCAACCGTGAAGGGCTGCCTCTGATGGTCTTTGCCAACTGGAGAGGCTTCTCCGGTGGGATGAAAGATATGTACGACCAGGTGCTGAAGTTCGGCGCTTACATCGTGGACGGCTTACGGGAGTGCTCGCAGCCCGTGATGGTCTACATCCCGCCTCAGGCCGAGCTCCGAGGCGGCTCCTGGGTGGTGATTGACCCCACCATCAACCCGCGGCACATGGAGATGTATGCGGACCGCGAGAGCAGGGGATCCGTTCTGGAGCCGGAAGGGACAGTCGAAATCAAATTCCGCAGAAAGGATCTGGTGAAAACCATGCGTCGGGTGGACCCAGTCTACATCCACTTGGCTGAGCGATTGGGTACCCCCGAGCTCAGTGTGGCCGAGCGGAAGGAGCTGGAGAGCAAGCTGAAAGAGCGAGAGGAGTTCCTCCTTCCCATCTACCACCAGGTGGCCGTGCAGTTTGCAGACCTGCACGACACCCCGGGCCGCATGCAGGAGAAGGGGGTCATTAACGACATCCTGGATTGGAAGACTTCACGCACCTTCTTCTACTGGCGGCTGAGGCGGCTGTTGCTGGAGGACCTGGTCAAGAAGAAAATCCACAATGCCAATCCCGAGCTGACAGACGGCCAGATCCAGGCCATGCTAAGGCGCTGGTTTGTGGAGGTGGAGGGAACCGTGAAGGCCTATGTCTGGGACAACAACAAGGATCTGGTGGAGTGGCTGGAGAAACAGCTCACAGAGGAAGACGGCGTCCGCTCGGTGATTGAAGAGAACATCAAGTACATCAGCAGAGACTACGTCCTCAAGCAGATCCGCAGCTTGGTCCAGGCCAACCCAGAGGTTGCCATGGATTCCATCGTCCACATGACGCAGCACATCTCGCCCACCCAGCGAGCAGAAGTCGTTCGGATCCTCTCGACGATGGACTCGCCGTCAACGTAGGAAGAGCTTTCTGCCCATCACCGCCCTGCCTCTGGCGCCAAGGGCCAGAGCGCTGGTCACACCCGAAACCACCGCAATGAGCAGGCACAGGAGACCAGCGCTGCAGTCACGTGGCTTTTTGCTTCCCCGCGATGTGCTCCGGTTCCGCACGACACATCGGGCCGCGGGCCACACCACCCCGTTCAGTATTTATTACCCTGGCTGTGGCCGCAGGCCCGTCCCCACCCCGAACCTAAGAGGCAATGACGGTACAGCACGTACCACGAGGCCTTCCTGCGCCCGAGCAGGGCCGCCCTGGCCCCGTGAGCCTGCGGCCACTGGCAGCAGAGGAGGGCCGGGACAGGAGCGGGGAGGGGGATCCTCGCGCTGCTGTCTCTCCAATCCCGCACCCGGCTGGGCACACGCCGGGCACCCAGTCTCCTCGCACCGAGGCACTGCTTAGGAAGGCAAATCAGAGTGTGAGGTCTGCAGGTCCGCGGAACTCAAAGACGGGCCAAACTGTGATCGAGAAGTAGAGAAACCGAGTGACTGTTACTGGTTTCGGGGCCCCTGCCCAGGTCCCCTTCTCTGAGAAAGACCTCGGGGAGGTTGACCTGCCACGGCCCCAGGGGCGACCGCATGGCCAGCTGAGGTGCCCGGGGCCCCACTGGCGGTGCCACCGTCCAGGCTGGCAGAGGAGAAGCTGGGGAGCTGCCTCCTGTCCCTGACAGAAACCAGGCGGCAAGGGCGGGCTGGCTAGCCTCTGTAGGACGCGGAAGGCTGGCAGCATCCAGCTGGGCGTTGACAGTCACGGGGTGAGGCATGCCTGCGGGGCCGGCCTCTGTTCCCGGGTCCACCCTTCTAGCAGCGGGCGCTCCTGCTCACTCCGGGTTTCATCTCCTCCTCGAACGCACAGGCAGTGCGTGCAGCCATGGAAAGGGGCCCCGCTGACATCAGGGCCCTCGGCTCCAGGAACTGGCCTTCCCCCCCGTGGGGGGGCTTCCAGGGAACACAGGACCCACGGAACCTTGACTACGACCCCCTCATGGTGCTGCTGTCCTCCGGGCTCATGGGCCCCTCCCCGGCCAGCGGCAGGGGCCTGCTCACGGGCGATGGAGAGTTTCTTTTCAACCACCAGTATATTCAAGGAAAGAGCTTCCCAATCCCGGACCTGCTGGTGTTCCTAAAGCAAGAGTGGCAGGTGAGCAGGGCTGGGCGAGCATCCGGTTCCTACAGCGCAGCTATCGCATCTGTCGCTGATGACCAAGGAGGAACTCAGTAAGACGCCTGAGAAGCAGGTGTATGAATGCTTTCGTACCCGCTCCAGTTTTGAGCCTTAACCCTCCAGTTCACGCACAATTTGAGAGCCCCTCTCCCCGTCCCCGGGAACCGCCTGTGCAGAGAGGCCCCATGGGGCCGGACGTGTGGCCGTCTGGCCCCGGAGCCTCAGCCCGGCGGCCCTGCTGTGGGGTTCAGCGCCATCCTGGGCAGGAGAAGGTGGGGACGACGTTCGGTCCAGGAAGAGTGTCCACTGTGGCTGGTGTCTGCTTACCCAGCAAGAATTGGATCCATCTTTGACCAGATTATTCCTCTATACTTTTCTACAATAAATAAAGTTCCACACGCCTATAGGTGGTGTGAGGTCCTGTGCTTGCCCTGGCGTTTGTTCAGGGGCTGGGTGGGTGACGCACGTTTACTCTCCACCACCAAACTGTGACATGTTAAATGAACGCTTCGTCTCGAGAATTCAGTGATGCTCACTCCTTCATCCCCAGAGCCCCCACTTTAGGTCTTTACCTGCACAGGGCTCTTGTCTAAGGCCAAGTCAGCACAGTCGTTTCATACACGAGGCCACCACTGCACACGCGTGGCTGCCAAGGCAGGAGCGTGACCCACTGAGGCCCGCCTGAGCTCACCGCGTTGTCTGTCCCCCCAGTCACAAAGCAGCCTTCGCCGGTCTCACTGAGGAGTCAGTGGATGCGCAGCCTGATGAGCACGGCGCTTCAGTCAAATGTATTCTTTTCCCTTTCCGTTGAAATAAACCTCCCCACTGGTAGACCAGTCACCACCGTGCGTCACGTCGGCCCAGCACCTTGCTCTGGTTCCAGGGAGCTTTGTCAGGCGAGCCCCGCCGCAGAGTGTGACCCAGGCTGAGCACAGGGATGCCGTTCCCAGGCTGGGCGGGTTTCGGGTCCACTTTCCCTTGACGGGCTGGGTGGTTTCAC EMBV3_21688 TTCAGAACTGAGGCTACAACAGGGGTGCTCTTAATCCCTGTGCTGCCCACCTAGTCCAAT Gene BVV0101_065865 + 1 EMBV3_13350 GK000010.2:70098698-70145553 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39910 TGCGTGATCCACCAGGATGACTTCTTCAAGTGCTGGAGTCCCTGGACATGGAGGCCATGC Variant GeneID:780788|ITGB1BP3:NM_001079643:78_cdna 208^256 1 EMBV3_37453 GeneID:780788 7 GENE ITGB1BP3 MGC128315 integrin beta 1 binding protein 3 EMBV3_02353 TGTTCCTACCAGAAACTGGACTCCGAGAAATTAAAGCCCACAGGGGAGCCTGAGGAGTGT Gene GeneID:100138069|TP53TG5:XM_002692332:119_cdna Constitutive 0 NULL GeneID:100138069 13 GENE TP53TG5 NULL TP53 target 5 EMBV3_21975 TCAAATAGAATTAGTCCTTGGCTTTTCTCCAGTCCCAGCCCCCTTCCTGCTGCTCTTGTC Gene GeneID:537921|FKBP6:NM_001102209:260_cdna Constitutive 0 NULL GeneID:537921 25 GENE FKBP6 MGC152367 FK506 binding protein 6, 36kDa EMBV3_07356 AGCCTGCTGGTGGGGATGTTTCAAGTGTGTCTTTGGCCCCTCGTGCACCAAGGACATTAA Gene GeneID:281457|GRK1:NM_174173:30_cdna Constitutive 0 NULL GeneID:281457 12 GENE GRK1 RHOK G protein-coupled receptor kinase 1 EMBV3_30084 GGAACTTATCTTTGTCTTCTCCAAACTAGAAGCAGCAGTCTCCAAGTCTCAATATAATTC Gene GeneID:613639|TSPAN12:NM_001046512:64_cdna Constitutive 0 NULL GeneID:613639 4 GENE TSPAN12 MGC137611 tetraspanin 12 EMBV3_03583 TGACCCTGCATACCGAGTGTGAGGCTGCTGTGGTGGCTCCTGATCTACTTCTGGGGGAAT Gene GeneID:504851|BOK:NM_001098868:11_cdna Constitutive 0 NULL GeneID:504851 3 GENE BOK MGC159657 BCL2-related ovarian killer EMBV3_24620 TGTGACCAGTGTGTCCACCAGTATCATCGAACGTGTGAAGAGGTCATCAGCAGAAACCGA Gene GeneID:524576|LOC524576:XM_002687704:118_cdna Constitutive 0 NULL GeneID:524576 5 GENE LOC524576 NULL similar to MGC152498 protein EMBV3_27660 GCAAGCTTAAATGCCTAGAAGCCAGGCGAGTAATGTAAATGACAGGGAGGGGCTAGTGTG Gene BVV0102_117147 + 0 NULL GK000008.2:54277644-54433542 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32005 TTTCTGGCTTAGGAGTGTACCTTAGCTCTGCTGCTACCCACAGCTCCCACTCAAGTGCAA Gene GeneID:785981|LOC785981:XM_002688664:71_cdna Constitutive 0 NULL GeneID:785981 7 GENE LOC785981 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_10681 AAGATGAGGTCGTGTCCACGGACTTCCTTAGCGATACCCACTCGTCTATCTTCGATGCTA Gene GeneID:532231|GAPDHS:NM_001040552:667_cdna Constitutive 0 NULL GeneID:532231 18 GENE GAPDHS MGC128279 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic EMBV3_20488 AACAGTATCCTACCAGGCCGCACATTGCAGGGACAGATATGGCATTTCTGAAGACTGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35085 GTTGGGATCTTTTTGCTGGAGTTGTTGAGTGGGATGTCAGGCAGTTTAATCATCAGGCTG Gene GeneID:504902|BFAR:NM_001098869:314_cdna Constitutive 0 NULL GeneID:504902 25 GENE BFAR MGC137916 bifunctional apoptosis regulator EMBV3_33539 GAGACAAAAAAGAAATATTGACCTCCAACAATCCAGAAAAACAAAGATGATATTACAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03033 GACACCCTGGTTCCATCACCAACTTTGGGAGCTGTGCTCAATGTCAAGGGCTTTCATGGT Gene BVV0102_326985 + 0 NULL GK000015.2:65105477-65131000 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059845 TCONS_00059850 TCONS_00059848 TCONS_00059843 TCONS_00059846 TCONS_00059849 TCONS_00059847 1 XLOC_036523 Coding TCONS_00059847 XLOC_036523 Coding Coding C15H11orf41 15:65088009-65108390 j TSS44829 3931 1 TCONS_00059847_1 282 0.0663953192571865 5 0.807360157016683 0.00289099966954862 0.000880158087473484 0.000484141805237127 4.46846089149285e-05 0.00198733639411954 2.0227852782549e-15 1.99061205348435e-05 1.79198021217178e-23 0.00010752101161588 0 5.31059161170485e-21 1.00374917973682e-12 2.94603778821444e-05 1.75662920786249e-14 2.56675343985231e-19 3.22091192179041e-21 0 6.12386171693264e-26 0.000825248567025735 0.00192319747308798 0.00063335338619524 3.55006818832115e-12 3.37736729599608e-26 9.2522963062285e-20 4.31553583411195e-35 1.62037612558438e-42 0.000177443148360565 1.88254659432949e-38 1.1114575588979e-05 2.90637556906907e-25 XM_002693519.3 C15H11orf41 PREDICTED: Bos taurus chromosome 15 open reading frame, human C11orf41 (C15H11orf41), mRNA. 0.0 6486 100.00 0.914525566013737 XM_005252847.1 KIAA1549L PREDICTED: Homo sapiens KIAA1549-like (KIAA1549L), transcript 0.0 3196 79.56 0.912999236835411 TCONS_00059847_1 sp|Q6ZVL6|K154L_HUMAN K154L_HUMAN UPF0606 protein KIAA1549L; 6e-136 425 95.13 0.797872340425532 0 coding 1 1 1 1 -0.0964486437870695 0.5855676732315 0.0166494409095848 0.717459517133013 GGGAGTCAGGCAGTGCATTCCTAAGTCAAGATTTATGATGGGTAATTAGTCTTATGGGTGCAGGGACTACATCTTGAAAGCCTTTATCACTGGAGAGATAAGTGATAAGAGATAAGTGATAAGAGATAAGCAGAGCAGAGAGGCCACCTGGAACCTAATGATCATTAGATGATATCTATTAACTACAAAGCCCTTGACAGCACAGAAGTGATTTACCACGCGGTACAGTCCCGGGTAGGGTCAATGGAAGGACAGGAGGAACTGAACAGGCCCAAGATGGAGTCAGTTATGCTAGCTGCCAACAATGGGGTGTTGCAACTCCCAGAGTCTGTGAAGGCCTACAGGTTTTCCCAGCTTCCTGAAATGGTCATGGGCTCTCCCCCTCCACCTGTGCCTCCACGGACGGGCCCTGTGGCTGTTGCTTCCCTCAGGCGGTCCACTTCAGACGTTGGCAGCAAGACTAGGATGGCCGAGTCCGCGGGGCCCGAGCCCGCCCAGCTGCACGACAGCGCCTCCTTCGCGCAGGTGTCCCGAGGCCCCGTGTCCGTGGCGCAGTTGGATCAGTCGGCTTTAAATTACTCAGGTAATACAGTGCCAGCAGTGTTCGCCATCCCAGCTGCCAATAGACCTGGTTTCACCGGCTACTTCATCCCAACGCCCCCCTCGTCCTACAGGAACCAGGCCTGGATGTCCTACGCTGGAGAGAACGAGCTCCCCAGCCAGTGGGCTGATTCGGTCCCCCTCCCGGGGTACATCGAGGCTTACCCCCGATCCCGGTATCAGCAGAACTCGCCCTCCAGGCTCCCTCGTCAGTACAGCCAGCCAGCCGGGCTGCACCCCAGCTTGGAGCAGGCCCCGGTGCCCTCCACAGCAGCCTCGCAGCAGAGCCTGGCGGACAACGACCCATCCGACACCCCCCTCACCAACATTTCCACGGCAGCCCTGGTGAAAGCCATCCGGGAAGAGGTGGCCAAGCTTGCCAAGAAACAGACAGACATGTTCGAGTTCCAGGTCTAATGCCTTCACCCCTTGAGACTTCCAGACTCTGAGGAAGCAGGCTTTGGGTTTTTCCAGGTGTGGTGGGACTGGAGACATGAGACGATGCAGGAGTCTTTCTCAGCCTCAGTTTCTAAAAAGGTGAACAGAGGGGCTTCTGGGAAACAGGAAACTCTTGAACAACGGGATGCTTGGCCTATTCAATTGATTGTATGTCAACAAGCCCGCATGTGGGACCATATGTTTGATACTCTGTTATGTTAACTGTTTGAGCTATGGGTGTATTCCATCCCCTGTGGAGCCTTAGTCAGGAGAGACGAGATGCTTGCTAATCTGCAGATTCCTGTCCAGTACCACATTTTAACAGGTCACCAGAAGAGGGCAAGCACAGCTTTATCTTCAGTGACCTCTGCATGTTAACTGTTTCTGTGTTAAAGGCAATGCAGGCGTGTGAAGAAGCCCCAGACTGTTCTCTCATTCAGCCAGAACTGTAATTATCCAGTCACCTCCAGTCTCCAAGGGAGACACTGACTCCAGCCAAGAAACTTGAGTCCTTTTCTTTTAAAGGTTCATATTCAAAGTCAAATAAATTGGATGAAAATCAGGACTGTCAATGACTGCAGCTACACATAGTCCTGACTCTTCCCCCTCCCCCCAATTAATTCAACAAAGGCCAAGAAAGAGAGAAGATAAGAGGGAATGGTGGATTTGTGTTGACAGGTTCTTTGAAAAGGTGTTGTCATGTTGGAAATAGAGTATTCTGCAAGTTGGGCTCTAGCTGGAAGAGCATCGGTGCTAAGAGCTTTTAGGATCCTACAAAAGAAAAACGGGTTTTCTTTGCCCTGCAGTGAAGGTAATCTGAGAACAGAGCTTCTCTCTTTTTGGGGGGACAATAGATACATCGACTTTTACAAGGAAATCTCTGTCTCTTCAACAATGATGTCCAGCATGTGCTGCCCAGTGATACAAAAGGAAATAGTCATCAATGCCTATTGGAAGCAGGAATAGTGAACCCAGTCTCCCCAGGCTGCAGCCTCTGTTTATAGAAGCTTCTGAATGTAGAAAATCTGTTGATTTATTTTCAAATGTAAATAACATTTTAAAAGGTGTATGGAGTTAGCCAGTCCCCTCCCATACTTGTCCCCATAATTAATAGACATAGGAGGACATTTGCCGCAATGGCGGGCTTCTGACCTCGTGACCATGATGTTGTAAGTTAGGCTTCCTGGCACGGTAGGTCAGCCTCCAGAGCTCTGGGTGGACATTGCCCTGCAGCCCTGAGGCACCAGCTGCTGACTATCAATGCTGACTTTGGGTAGCCCAGGGGAAGGGACACCCTGGTTCCATCACCAACTTTGGGAGCTGTGCTCAATGTCAAGGGCTTTCATGGTGTCTGTTGGGGAGTGAGGTCCTTTCCTGCCTTCACCCACGATCCATCTAGCTTCAGCTTGTATTCATCTCCTCTGAGTCCATCTTTCCATTCTCCTCATGAGTTTCTTTGGTCTTTACTGAGAGAAGAAGGTGGAAATTTTCAAATTGAGAGAAGAGTAGGAATGGAACTGATTAGAGTGAGAGAATCAAACTGTCAAAGCACAGACTTTTCAAAGAAGCTGTTTTTATTTCTCAATGGCAAATTGCCCTTTCTGCAATGTTCTGGAGACGATGTGTCATGGATCCCCCAAACCAGTCTCTTGTTCGGATGATATTAGGTAGCGTCCTTTTGGTATGCTGGTTGATCTTTCATAGTGTTAGTTTTTTGTTACTTAAAAAAAAAAATCAGCTATAAATAAAATGTATTTTTGTAATTTCCATGTGTATATATGGTATATTTCTACCAATGGCCAGGTGTTGTAACCCAAAACCTAAATCAGTTTGCAAACACTGTGGACAGTGCAAGATTTTATTGACAGATGAACACAATGCCTAAGTCTATCCAAATAGGGATTCAGTGCACTTGAATGAACAAAGAGCCAAAGAAACTCAGCCTTTTCATGCAAATGGTATGAGTCTGATAAAGTCAGCTACATTGTCCCGCCTTATCAATGATATTACTATCTCATCAGTGCAATGATATCAACCCAGTACTTTGTCTACTTGGTAAATGCTTGGAAATACTGTATGTGAAAATGAAGTTTCAAGACCTTAGTGTAATTTAAATATATACACATGCTTCCAAGACAGTGTCTACACTTTGGATGTCCCAGTGACTCGCAGAGGAAGAGCCCACAGTGTGCTGTGGTCTGGGTCCAGTTGGCTAAGAGGATGCCGAAAAATCACGGCGAGCTGTGCAGAGTCCCCTGAGATAATGAGTCAGTCAGTGGAGATGACTACAAATACAGCATTCTAAGTCAGACACTCTTTTAAACTAGACACCACAGGTTTAAGAGCAGTATATGGGAGGAAAACCTTAAGTTGAGGAGAAATCAGTGTGTCCATGTTGTCCCACCAATGCAAAGATGGCCGCCATTGTTTGATGTCCTGTGACTAAGATGGGGGTCCCTTTTCTGAAGAGTCTCCTGACCCTCAGGAGATGATAGATACCTGGGCGGCTGGCCCTGAGACAAGGCAGGTGTTCAGAAGTGCCATGAGAGCCCAGAGATTCTGTGTTCCTCATGACCCTCCAGACAGTTGAAGAAACCTTGAAGAACCAGAGGACCTTTGGTGACGTCCAAGAAGGAAGCCAACGTTCGGAGAAGTGGAGTAACCTGCCCAGGCCTTCAGCCCCAGCCCACTTACTCGTGATCGGGCTTGCTTTCCATTTCACCATGCTGCCTGAACGCTTGTCTGTGATGCGTTTCTTGAACTGTGCTAGGAAGTTTAAAAAGTAGACAAGGGTTATATGAGGGACTCCCTACATTCTTGCAAAGGAAAAAGATGATTGAATACAGTGTATAGAGGGCAATGCATTTGTGGCATAATAAACATTTTTTGGAAC EMBV3_29813 AATCAATGAACACTTTATTTATTTTACAGAGAAAACTTATCTGTGAACTTTACTATATAT Gene GeneID:508527|BOD1L:XM_002688464:32_cdna Constitutive 2 NULL GeneID:508527 6 GENE BOD1L NULL biorientation of chromosomes in cell division 1-like EMBV3_07599 ACACCCTAAGAATAGCAAGCTTCCATAAGAGATTTAAAAAGCTGCCTGGGAAACCCATGG Gene GeneID:511674|CXCL13:NM_001015576:56_cdna Constitutive 0 NULL GeneID:511674 6 GENE CXCL13 MGC134170 chemokine (C-X-C motif) ligand 13 EMBV3_36171 CTCCTTGCGGTTGGCGGCTTAGGCAGCGCGGTACTTGGGAGAATGGATGAGACCTGTGAA Variant GeneID:616091|MGMT:XM_002698584:168_cdna 787^882 1 EMBV3_18639 GeneID:616091 26 GENE MGMT NULL O-6-methylguanine-DNA methyltransferase EMBV3_02711 TCTCCATTGTGATCCCCTTTCTCTATGTTGGGACGCTCATTAGCAAGAACTTTGCTGCTC Gene GeneID:506149|C5H22orf32:NM_001045937:141_cdna Constitutive 1 NULL GeneID:506149 5 GENE C5H22orf32 C22orf32 MGC137004 chromosome 22 open reading frame 32 ortholog EMBV3_38374 TTTCCACCACTTAGGGCAAAGTCAGCCAAGCTGCACTCCAATTCTGACAAAGGTGATGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01345 TAGTCCCCCATCCAGGAGAGATGCAAAAAGCACTGAATGCTGCCTTGGCCTCTGGTGTTA Gene GeneID:782674|NOL6:NM_001099185:79_cdna Constitutive 0 NULL GeneID:782674 8 GENE NOL6 MGC151790 nucleolar protein family 6 (RNA-associated) EMBV3_31083 CAGCGGGCCTCTCAGATATGCCATCTATGGGGGCAGGACACCGCCGCTTTCGCTGCCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16565 CCAACCATATCCATCACCTCTTCTGTGATGTTAAGCCATTGTTGGAGTTGGCCTGCGGGA Gene GeneID:785910|LOC785910:XM_002697404:88_cdna Constitutive 0 NULL GeneID:785910 23 GENE LOC785910 NULL similar to olfactory receptor, family 12, subfamily D, member 2 EMBV3_24981 TAAGGACTTGTGGCAATGCATCTGTCTATCCTTTCTTAACTTGTAAAAGCTCAGACCGGG Gene GeneID:522449|LOC522449:NM_001098384:69_cdna Constitutive 0 NULL GeneID:522449 7 GENE LOC522449 NULL hypothetical LOC522449 EMBV3_18419 TGCCCAGGAGTTTCTTCCTCCACCCAGTGCAGCACATTCAGGCCCAAGAAAAATCACTAA Gene BVT0102_117506 + 0 NULL GK000016.2:27059357-27278410 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20987 TGGTGGGGCTGTTTGAAGACACGAACCTGTGCGCCATCCACGCCAAGCGCGTGACCATCA Gene GeneID:619141|LOC619141:XM_002686053:274_cdna Constitutive 0 NULL GeneID:619141 3 GENE LOC619141 NULL similar to His3:CG31613 CG31613-PA EMBV3_35616 CCAGAGGGCAGAACCCGGAAAAGCTCAGGTTCAATTTCTACACCTCCCAGTACTCCAACT Gene GeneID:768024|MGC137036:NM_001077083:380_cdna Constitutive 0 NULL GeneID:768024 23 GENE MGC137036 NULL hypothetical protein MGC137036 EMBV3_02601 GAAACTCAAAAATGGTATACTTCAAAATCGATTAAGTTTGCCTACAGGGTAACCCCCAGG Gene GeneID:281952|SLC6A15:NM_181023:26_cdna Constitutive 2 NULL GeneID:281952 5 GENE SLC6A15 NTT73 solute carrier family 6 (neutral amino acid transporter), member 15 EMBV3_32010 TGCTGCAGAGCAAACTCAATCAGATCTTTGAAATCACTATCCGGCCCCCTCCAAGCCCAT Gene GeneID:517590|EFR3B:XM_002691505:471_cdna Constitutive 0 NULL GeneID:517590 11 GENE EFR3B NULL EFR3 homolog B (S. cerevisiae) EMBV3_12724 TCCAGTGAAGCCTTGGAAGAAAACAGGGGCTACGTGGAAATTGAGCAGTCAGAGAGACCT Gene GeneID:514781|C7H5ORF15:NM_001035299:14_cdna UTR3_Alt 2 NULL GeneID:514781 7 GENE C7H5ORF15 MGC127320 chromosome 5 open reading frame 15 ortholog EMBV3_29376 ACATTACATGGCTGAAGAACGGACATGCAGTCACAGAGGGTGTTTCTGAGACCAGCTTCC Gene GeneID:282535|BOLA-DQA2:NM_001012681:2_cdna Constitutive 0 NULL GeneID:282535 23 GENE BOLA-DQA2 BoLA-DQA MGC128231 major histocompatibility complex, class II, DQ alpha 2 EMBV3_30232 AGGTCCAAATCTGATTCAACCTCCCTCCTAACCACTCATGGTGCCAAGCTCAGTACCCTC Gene BVV0102_059987 + 0 NULL GK000015.2:57208404-57231309 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14935 ATGCCTGAACCGGCTAAGTCTGCTCCTGCCCCTAAAAAGGGCTCTAAAAAAGCTGTGACC Gene GeneID:613363|LOC613363:XM_002686662:107_cdna Constitutive 0 NULL GeneID:613363 4 GENE LOC613363 NULL similar to histone cluster 1, H2bd EMBV3_09823 TTCTGCGTCCACGTGAAGCACCCTCACAAGGAACTACATGAATGACAGCCTTCGCACAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06564 TCTTCATGGTGAGCGTTGGCCTCACTAAGCTCTTTTGCATACACCCTTCTGGTGTCACCA Gene BVT0102_082915 + 0 NULL GK000021.2:70096571-70113043 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125639 1 XLOC_077181 NonCoding TCONS_00125639 XLOC_077181 NonCoding NonCoding - 21:70107075-70107520 - TSS94398 445 0.4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.04013343801764e-06 0 0 6.18474801377638e-05 0 0 0 0 0 0 0.000270213406801243 XM_005197672.1 LOC100849046 PREDICTED: Bos taurus T-lymphocyte surface antigen Ly-9-like (LOC100849046), transcript variant X2, mRNA. 4e-20 102 80.33 0.269662921348315 0 noncoding 0 0 0 0 GTGATTTCTCCTCTTTCATTTCTTGTTTTGTTTACTTGGGTCTTCTCTCTTTTCTTCATGGTGAGCGTTGGCCTCACTAAGCTCTTTTGCATACACCCTTCTGGTGTCACCAAGCTCTTTTATTTTTTTTAAATTGAAGTATAATTAACTTACAATGTTGGGTTGGTTTCAAGAATATAGACAGTGATTCAGTCGTACATATACAGACATATTCTTTTTCAGATTCTTTTCCATTACCACTACACTCTTTAAATCATTACACATCTTTGTTGGTAGATGACAGGAATTTCTTGGAAGAATAATTGCAAGGACATTTCCCTTCCTGGCTGGAAGGGTCTGGGGAGGCCCAGATGAGGTGGAGCCTGTCACTACTGTTGCAGATCCCTGTCCACTCACGGCCCTGAGTGCCCTCCCGGCTTTGCCGCTCTACCCCAGGGCAGCCCAC TCONS_00121969 . 5' 3826 TCONS_00121969 . 5' 3826 EMBV3_23987 ATGGCATTTTATTGAGTATCCTCATTACTGTATCATTTGTGGGGTTCACGCCTCGTCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33677 TTTCACGGCTAGGGAGACCTTACACGTCTGAAGCAAGGCCAGAGCGACACCCAGCCATGT Gene BVT0101_009982 - 0 NULL GK000015.2:40356922-40718717 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059079 TCONS_00059080 TCONS_00061230 TCONS_00059077 TCONS_00059078 2 XLOC_036257 XLOC_036948 NonCoding TCONS_00059080 XLOC_036257 NonCoding NonCoding PARVA 15:40710972-40754831 o TSS44384 935 1 TCONS_00059080_3 183 0.438502673796791 4 0.978772401842309 0.000248040920376495 9.77002831746604e-05 0.000168214156896019 2.05692718225952e-05 2.82841354045762e-07 2.29534028695105e-05 0.000203246028939936 0.00110070675080986 0.000380058295231096 0 0 0 4.44028624744143e-51 1.01276126219418e-118 1.06909399361087e-14 0 0 0 4.78557017862097e-05 2.00989927356265e-05 1.54477751748675e-05 3.0145668052902e-10 0 0 0.000571750947331132 0.000630640009180135 0.000357037632436281 0 0 0 XR_228851.1 LOC101905019 PREDICTED: Bos taurus uncharacterized LOC101905019 (LOC101905019), 1e-31 141 73.31 0.282352941176471 NR_038938.1 LOC100505761 Homo sapiens uncharacterized LOC100505761 (LOC100505761), 2e-08 64.4 77.27 0.0909090909090909 0 noncoding GGGGTTGTGAGGGGCGTGCTCCTGCCGCTGGTTTCCCTGGTAGCTGATGCGCCAACCTGATGTCAGTTCCCCTGTAAGCGGTAGCCGCCTTCTCCTCCGGGTGGCGAAGACCTCTGCTGTGTCCTCCCCACCGCACATGGCGGGGTGTCGCTCTGGCCTTGCTTCAGACGTGTAAGGTCTCCCTAGCCGTGAAACCACTGAGGCCTCTGTCACTGTCTCTGGACTGTTTAGTTGTCTTGAGGCTGAACAACTACAAGGCTTGCAGGCCTGTGGGGTGCAGCCCAACATCGGACATGCTCTGCAGATCAGCTTCCTGGGAAGCCCACTCTAAGATGGGGGACTGCCAGTGCCAGGCAGACAGGGAGTGGGGAACAAGATACACCTGCTGGGAGCGCGGATCACAGGGCCAACACCTGAGAGGGAGCAGGAGCGGGTGGGGAGGAAAGCTCAACAGTGAGGCAGCTGCAACTCTCGCCAGGAGTTCTGAAGGGCTGGTTACGTGGAGACGGCATGGACAGAAACAAGGGGCTGCCTGCATGCTTTGGCTCACAGCCTCCTTTCATCTTCAAAGTCAGCGATGGCTGGTGGAGTCTTTCTCATGTTGCATCACTCTGGTTATCCTGGATCATCTGGGGGGTTCCAATGAGGATCCAGCTGAAGATCCTCAACTTCCATCTGCAAAGTCTCTTTTAGTATGTAAGAGCAAGACTGCCCTGCGAGCGCCCAGGACCCATGCAGAAGCCCAGCAGTGTCGACGGTCTAGTGACCTGCAGGAGGACTGCAGCCGTGGTTCCTTCTCTTCCCACCAGCGGCTGACCCTCCCTCCCCACCAGCCAGCCCTGTAACCAGGCTGGCGCAGACAGACAGGCAGGAAGCAAGCTGAGTGCCTGTTCTTTAGCTGCTGCAGAATTAACTAGACCCCACTGGCAGTCACC TCONS_00061232 TCONS_00061233 r 3' 31 TCONS_00059082 s 5' 7745 EMBV3_00813 CCCTTGGAAGAAACAAAGACAAGCCACTATTACCCTGATGAGACGTTCAGCGCTTGTGAA Gene GeneID:527638|TRPM1:XM_002696605:97_cdna Constitutive 0 NULL GeneID:527638 21 GENE TRPM1 NULL transient receptor potential cation channel, subfamily M, member 1 EMBV3_03158 CTCCAGTGTCACAACTGAGTGTTCATTTTAGAGACCAGGGCTGCTACCCTCATGGAGTTG Gene BVT0102_405811 + 1 EMBV3_16008 GK000025.2:1744985-1746175 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145906 1 XLOC_088969 Coding TCONS_00145906 XLOC_088969 Coding Coding PGP 25:1744510-1747366 = TSS109225 2757 1 TCONS_00145906_1 321 2 0.0350262697022767 0.000463885398704046 0.000182235031020105 0.000229924115364932 0.000144576749983876 0.000224444228899448 5.57901108768337e-05 0.000467599092131523 0.000141592131413227 0.000206769775523859 0.000867326689490747 0.000273174542224001 4.79871472706783e-05 1.38763583640997e-05 0.000288348295394707 7.77510565944455e-05 0.0139146763059042 0.00445015511640334 0.00800871769348598 0.000764691829587451 0.000284319357311657 0.000491089422340252 0.0048932729053113 0.0054671518068807 0.00530241685100528 0.000266383678344288 0.000183332355600712 0.000270205930995108 0.00133086316317807 0.00105121409938579 0.00142182874675596 NM_001038172.2 PGP Bos taurus phosphoglycolate phosphatase (PGP), mRNA. 0.0 4964 99.93 0.999637286906057 NM_001042371.2 PGP Homo sapiens phosphoglycolate phosphatase (PGP), mRNA. 0.0 1876 80.96 0.716721073630758 TCONS_00145906_1 sp|Q2T9S4|PGP_BOVIN PGP_BOVIN Phosphoglycolate phosphatase; 0.0 650 100.00 0.996884735202492 4 coding 0 0 0 0 -0.14062639828546 0.738560087316078 0.00778191944098215 0.886835249980023 CGGCAGCAGGCGGCTGCGAGGAAGAGCGGCCGGCCGGTGGCGGCGGCGGCGGCCGGTGGCGGCGGCGTCGGCGGGCGGCCATGGCGGAGGCGGAGGCTGGCGGCGACGACGGCCGCTGCGTGCGGCTGAACGCCGAGCGGGCCCAGGCGCTGCTGGCCGACGTGGACACGCTGCTGTTCGACTGCGACGGCGTGCTGTGGCGCGGCGAGACGGCGGTGCCCGGCGCGCCCGAGACCCTGACGGCGCTGAGGGCCCGCGGCAAGCGCCTCGCCTTCATCACCAACAACAGCAGCAAGACCCGCGAGGCTTACGCCGAAAAGCTGAGGTGCCTGGGCTTCGGCGCCCCGGCGGGGCCCGACGCCGGTCGCGAGGTCTTCGGCACGGCCTACTGCACCGCGCTCTACCTGCGCCAGCGCCTGACTGGCCCGCCGGCCCCCAAGGCCTACGTGCTGGGCAGCGTGGCCCTGGCCGCCGAGCTGGAGGCCGTGGGCGTCTCCTGCGTGGGCGTGGGGCCCGAGCCGCTGCTGGGCGATGGCCCCGGCGCCTGGCTGGACGCGCCCCTGGAGCCCGATGTGCGCGCCGTCGTGGTGGGCTTCGATCCGCACTTCAGCTACATGAAGCTCACCAAGGCCGTGCGCTACCTGCAACAGCCCGACTGCCTGCTTGTGGGCACCAACATGGACAACCGACTCCCCCTGGAGAACGGCCGCTTCATCGCGGGTACCGGCTGTCTGGTCCGAGCCGTGGAGATGGCCGCCCAGCGCCAAGCCGACATCATAGGGAAGCCCAGCCGCTTCATCTTCGATTGCGTGTCCCAGGAGTACGGCATCCACCCAGAGCGTACCGTCATGGTGGGCGACCGCCTGGACACAGACATCCTCCTGGGCGTGACCTGTGGTCTGAAGACCATCCTGACCCTCACGGGTGTCTCCAGTCTGCGAGACGTGAAAAGTAATCAGGAAAGTGACTGCATGGCTAAGAAGAAAATGGTCCCTGACTTCTATGTTGACAGCATAGCCGACCTTTTGCCTGCCCTTCAAGGTTAAAGATTTAGTGTCTTTAATCTCCAGAATAAAAAAAAAATTGAAACCACTCACCCAAATTAATAGGTGGGGCTTCAGCATCGCTCAGCTAGGTGGCTTCAAGTTTGCTTACTTGGAGTTAAGCAGAGGCGCTAGTTGTTAACCTTGTAAGTAAACGTTTGGGGGGCGACTTTGTTTACAGATACTTATATTTTAAGATGCACTTTTAAGCTTGGAGGGCATTGTGGGGATCCTGGGCCTTAGGTGCCAGTGGGCCTTGCTGTTGGGTTCAGTGTATGTCCAGGATTCAGGTAACCTCAGGGCCTACTGGTGGGACTGAGGTGGGTCTAGGGGTGTCATGTATTTATTGAAAGTTTCAGGAATCAGTGGGGAGGAGGCGCTACTCAATTCCACTGTTGTGAGCAACTTGTGCAAACCAAGCCAGGGCCCCATCAGTGTGGTCCTCAGAGGAACCTGCTGCCGCCTCATGTCCTCACCTGCAGGGTGGGAGCGAAGGAAGGGGCTGCTCTCAGGCGGAGCCTCCCTGTCCATAGGGTCTGGGGTGCTGCCCTCACCACCCCACACTTCCTTCAAAACCACTCCAGTGTCACAACTGAGTGTTCATTTTAGAGACCAGGGCTGCTACCCTCATGGAGTTGTGCATTTCTGTAAACTCAGCCCGGCTGAGCCTCGTCCTTTCCAAACGTGCATGTAAACCCAGGTGGTCTGGACTGAGCCTGTTGCTTGGCGAGCAGCCAGGAGGGCATGAATGCCATCGTTGAACTCAGGGCTGCCGTTTAGGGAGCTCAGAGCAGCATTGATACCAAAAGTTTTTGTTTTTTCGCTTTCTAACAATTTTGTCAGGTGGTGGATTTGAAGCGTAAGCGTATGATTAATAGCTGTGCTCTGTCTTATAGGGGAAATCCCACTGAAGAAGTCTGCGTGCCCCACAGCCAGCAGTTGGGCCAAAGGCACGTGCTGGCCAAAGAATGCTTGTCACCCAAGGCTCCCTCTGGGTAGGGGAGGAAAGAGGTGTCCCCAAAACAGGAATTGAGTCTTTTCCTGTCTTCCCAGACACTTGGTTGGGATAGATGTCATATCCCAGTGGTCCATGAGGCCATCGGTTTTGACCCTGAGGTCCCTTGTCACTTGCCAGCTGGAGGACTGGCTGGGTCCACTGGCCAGCCAAGGGTTCTTGGCAGGGGGCCGTGGCCTTTTCTGCCTGCGCCCTGAGTTGCTGACCTTTGAGGATGGGCCACTGGCTGCACTTGTAGGGGAGTGCCTGGGAAGCTGTTCCTTTTGGCCGACTACTTCCTGGTGCCTCGCCCCACACCCAGCAGCTTCTGCTCAGAGCCCACAGTTCTCTCCTAGCCTCAAGATCACCTTCACCCACCCTCTAAGAGTTCTCAGAGCAATAAAGCATGTCCTGAGCCTTGGCTCCTTCCAGGGCTGAGCGTCTGGGGTTCAGACTCTGCCGGGGGCAACACGAGGGCAGCAGCGCCTGTGAGGTTGGTGGTGCTGACGTTGGCTCTGTGAGGTCGGCTCAAGGTGGGTCTGGATGTTGAGCAGGCCTGTCAGGGCGTTGTCACCCACACCAGGAGCACGCAGCAGGGGCGGTAGCCGGCGACACTTCCCTCTTTGCCTGGGCAGCAGCCCAGGAGCCTGTGCATCCTGTCCCTCACCCCTGTTGCACTGTGTGAACCCAAAGGTGTATTAAACTCTCGACCACAGCTGA EMBV3_42889 TTCTCGTCTGTCTTCTAACCTGCTTCCTTCTTTGGGTGTCGTCCCCACACTAACTGTCCT Gene GeneID:519271|ERC1:XM_002687907:62_cdna Constitutive 0 NULL GeneID:519271 5 GENE ERC1 NULL ELKS/RAB6-interacting/CAST family member 1 EMBV3_38924 AACAGTGTAATCTGCTGAAAGGGGTGTGCAAAGACGGAGGCTGCACCACTATAGAACAGC Gene GeneID:100297571|LOC100297571:XM_002683819:3_cdna Constitutive 0 NULL GeneID:100297571 27 GENE LOC100297571 NULL hypothetical protein LOC100297571 EMBV3_16436 GGCATAGAGCCACGTATCAAGGTGTCAGAGTTGCTTTAGAGTCAGGGACATTCCCAGTTG Gene BVT0102_194547 + 0 NULL GK000010.2:21257972-21296169 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019841 1 XLOC_010520 NonCoding TCONS_00019841 XLOC_010520 NonCoding NonCoding - 10:21284094-21284965 - TSS13731 871 1 TCONS_00019841_1 48 0.354764638346728 1 0 0 0 0 0 0 0 0 0 0 0 1.05128910516044e-05 0 0.000125181176044319 1.08013508429698e-05 0 0 0 0.000489717155203058 0 0 0 0 2.10655596634425e-05 0.0007121605656932 0 0 0 2.20554646535092e-05 4.45887947729187e-05 0 XM_005223850.1 PAK1IP1 PREDICTED: Bos taurus PAK1 interacting protein 1 (PAK1IP1), 6e-54 215 85.34 0.21699196326062 0 noncoding 0 0 0 0 -0.0372351647378582 0.728679084546388 -0.0149784484298301 0.815140612362781 GTATATCCATGATGAGACATTACATGTTCATTTAAGCGCTTTTTATTTTGAGAGAGATCTTTATTTGCTTTACACAACATTAAAAATTATATATTATACACTGCGTGTGTGTGGGCTCAGTCACTAACTCATGTCCAACTCTTTTGTAACCCCCTAGACTGTGGTCCACCAGGCTCTTCCGTCCATGGAATTTTCCAGGCAAGAATACTGGAATGGGATGCCATTTCCTTCTCCATATTAAGCACTTTAATCTGATTTTTTAATTGCATAAGAAAATGCGATACAATATGAAGTGAACAAAACAGGATACAAATGTGTACAAGTAGCCTAGGGGAGTGGGAAGATAGTGAGAAATGTCTATAAAAACATAAAAGGAAATACAGTATATATGAAAACAAGCCTGTGCCCTTTACTCTTCACTCCACCACCTCTCCTCAGCCCTTGCCCCTCTTCAGAAACTGGCTTCAAATCCTGTTGAGGAAGGACTCCCTGGTAGTCCAGTGGCTAAGACTCCGTGCTCCCAATTCAAGGGGCCTGGGTTTGACTCCTGGTCAGAAAAACTAGATCCCACATGCTGCAGCTAAGAGTTCCTGTGCAGCAACTGAAGAACCTGCATGCTGCAATGAAGATCACTGCCACTGAGACCCAGCACAGCCAAATAAATAAACATGTATTAAACAACAAATCCTACAGAGGAGCCGAAGCCACATTATACTGAGGAGTGACCTCCCTTAGTCATCATAGAATTATCTTACTCATCATACTTTTGTAACTTTCTGTGTCCTCCATCCAGAGGACAAATACTCGCCGCAACTGGGAATGTCCCTGACTCTAAAGCAACTCTGACACCTTGATACGTGGCTCTATGCCA TCONS_00016302 TCONS_00016303 TCONS_00016304 TCONS_00016305 TCONS_00016306 TCONS_00016307 . 3' 11205 TCONS_00016302 TCONS_00016303 TCONS_00016304 TCONS_00016305 TCONS_00016306 TCONS_00016307 . 3' 12075 EMBV3_24886 TCTAGAGTCCAGGAGCCACAGCTACCGAACCCATGGGCTGCTACTATTGAAACCTGTGCT Gene BVT0102_270229 + 0 NULL GK000027.2:36261942-36531987 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19316 CAAACCGGGTGGTGCGAACCCTCCAGAACACCTGAGCCTCTTGAGCGATAGGAAGGGCCT Variant GeneID:510447|PEX16:NM_001075449:54_cdna 482^683 1 EMBV3_22903 GeneID:510447 15 GENE PEX16 MGC137296 peroxisomal biogenesis factor 16 EMBV3_31812 GAACATTCACGGTCTCGTAGACTTAGCTTCCTTTTCCCTGCTACCTCTGACCTGAACCTC Gene BVV0102_333048 + 1 EMBV3_15526 GK000022.2:55073013-55497669 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08744 GCCAGAGAATTGATCGAAGTGATTATTCTGACCATACAAGGAAGACAACCAAGGATGAGC Gene GeneID:532586|DEPDC7:XM_002693496:146_cdna Constitutive 1 NULL GeneID:532586 15 GENE DEPDC7 NULL DEP domain containing 7 EMBV3_05095 GCTTGAAGAATGAGTACATGGAAAAGAGGAACAAGAGCAGGGAGCTTGGCAACGCAATGC Gene GeneID:614078|C18H16ORF61:NM_001113175:62_cdna Constitutive 3 NULL GeneID:614078 18 GENE C18H16ORF61 MGC137594 chromosome 16 open reading frame 61 ortholog EMBV3_02636 GGACTGAGGGGTCTCCCAAAATCAGTCCCCTGAGGATGTTGAGGAACGACTATAATTGTG Gene BVT0102_320411 + 0 NULL GK000004.2:70246095-70414250 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184436 TCONS_00184434 TCONS_00184439 TCONS_00184435 TCONS_00184437 TCONS_00184433 1 XLOC_111349 NonCoding TCONS_00184436 XLOC_111349 NonCoding NonCoding - 4:70302364-70343054 - TSS137349 746 3 TCONS_00184436_3 39 0.447721179624665 4 0.981764113150974 0.000629594532724368 0.000312484524702541 0.000968083646901061 6.49814704349926e-05 0.000471751468546225 0.000463838886067814 1.6952500592298e-11 1.70608120411058e-05 4.25278020029058e-05 0 2.57131116136672e-35 1.14466157024643e-09 0 0 1.27296919533083e-40 0 0 0 0.00185369077000761 0.00360938720684915 0.00034228014162419 6.35040240048547e-49 0 0 0.000526643094721097 0.00081138237823462 0.000620029631729837 0 0 0 XM_617702.5 DGKH PREDICTED: Bos taurus diacylglycerol kinase, eta (DGKH), transcript 7e-84 315 93.72 0.276139410187668 0 noncoding ATCACAGGCCTGGCGCCATTTTACATCTGGGGCCTGCTCATTGGTGAATTTTGGTACCTGTTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTTCCCTGTCCCTGGGATTCTCCAGGCAAGAACATTGGAGTGGGTTGCCATTTCCTTCTCCATTGTGTGAAAGTAAAAAGTGAAAGTGAAGTCGCTCAGTCCTGTCCGACTCTTCGCGACCCCATGGACTGAGGGGTCTCCCAAAATCAGTCCCCTGAGGATGCTGAGGAACGACTATAATTATCTTTGCTGTGAACATTCTTCTGCATGGCTTCTGGTGCACAAGTGCAAGAGTTTCTCAGGATTTATCTGGGAGTAGAATTCCTGGGTATGCACACTCAGGTGACGAAACTACGTTGGAGAAGTTAAGTAATTTGCCCAAGGTGACGCAGCTGAATCTAAAGGAATTAGACAAACAGAGAAGGGAGACTCCTGGTCCACACAGATGAGTGACCACGCTGGCTCCGAGACCACTGTCAGGAGGTGGAGAAAACACCAACAGGCATTTGATTTGCTCTCAGGAACCAGGAGCACATGGGTAGTCAAGATTTGAAAAGGAGAGTGAAACAGTGTTCTGCAGAAACTTCTAAAGCTGTCAGGGATCAGAAACTCTTCAATTCCAACCTCATACTGAAATTTAACATCCTTCATTAAATATGTGGAATTTTAAATAAAT TCONS_00184429 TCONS_00184430 s 5' 56271 TCONS_00184429 TCONS_00184430 s 5' 56551 EMBV3_00666 AGAATGGCTATGACCCCCAGCAGAACCTGAACGGACCCTGCCCAGCCTGCAGGGGGCGCT Variant GeneID:100336938|LOC100336938:XM_002689142:128_cdna 352^754 1 EMBV3_20899 GeneID:100336938 7 GENE LOC100336938 NULL azurocidin 1 preproprotein-like EMBV3_03905 TTCTGTTCAATATGTATTTGACGCGAGAGCGCCGCCTGGAGATTAGCAAGACCATTAACC Gene GeneID:536141|HOXC11:XM_002687223:63_cdna Constitutive 0 NULL GeneID:536141 5 GENE HOXC11 NULL homeobox C11 EMBV3_06024 GTAGGTGTGTTAATCAGTTCACACCATCAATTCACATCATTTAGTTAGAGGCAGAACTTG Gene GeneID:522040|MGC143117:NM_001080286:30_cdna Constitutive 2 NULL GeneID:522040 19 GENE MGC143117 NULL hypothetical LOC522040 EMBV3_06651 GAAAAGCCCTTTCTGAGGAAAAACGTGTCTCAACCAAGACGTCAGCCGCAGACCTGGTGA Gene GeneID:100336584|LOC100336584:XM_002697805:421_cdna Constitutive 0 NULL GeneID:100336584 24 GENE LOC100336584 NULL cell death-inducing DFFA-like effector a-like EMBV3_25373 CTGAACAGGAAGACAGGCCGAAGGCAGCTCTGTGTAGGATCTGAGACACCAAATGCAATT Gene BVV0102_107557 - 1 EMBV3_35789 GK000018.2:59679955-59698287 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087293 TCONS_00087294 TCONS_00087325 2 XLOC_052440 XLOC_052446 Coding TCONS_00087294 XLOC_052440 NonCoding NonCoding LOC617476 18:59571445-59825821 o TSS64846 2884 2 TCONS_00087294_5 83 0.386615811373093 2 0.98867027027027 2.74435931855487e-05 8.42916626352688e-10 0 8.10588397426929e-06 0.000119834413643005 1.24027145289701e-06 3.09543267053255e-05 3.60455162421081e-15 5.84230312366117e-05 1.00283536692451e-05 3.34283467414257e-05 1.71853179080718e-05 8.07610988581216e-13 0.000114414162616625 0 0.00104312544564117 1.86206832603939e-05 3.08055090168809e-12 0.000342300957326392 2.61778723578841e-05 1.52627831882884e-05 0.000135563849199765 0.000285296923371994 0.000115525690401394 6.56571632676901e-06 0.000101241823943485 6.67213760254255e-06 0.000141619333750807 0.000184343475028593 3.20002992994711e-05 XM_003583486.2 LOC100139996 PREDICTED: Bos taurus zinc finger protein 320-like (LOC100139996), 3e-178 630 80.48 0.229195561719834 0 noncoding GAGCTCATTTACAAATTAACCTCAGCAATATTATTTAAAATCTGTCTGGACTTATGCATGTCTCAGTGTGTGTCTTTGATTTTGGATAATATTGCTGAGGTTTATTTGTAAATGAGCTCTTACTCAATTGGCTTTAAAAGAAAGGAAGCACTTGGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCCACCTGCCAGTGCAAAGGACAGGTTCTATCCCTGGTACAGGGAGACTCCACATGCCGCAGAGCAGCTAAGCCCGTACACCACCACCACTGAAGCCCACGTGCTCTAGAGCTCATGGTCCACAAGAGAAGTAGCTACAATGAGAAGCTCATTCACCACAACTAGAGGGTAGTCCCTGCTTGACATAACGAGAGAAAGACAGAGCAGTGATGATGACCCAGTGAAGCCAAAAATAATAAATGAATTAAAAAAAAAAAAAAAACAGTAAGTGCATACAAATCAATTAGAAGGGAAATTAACCTAAATGAATTTCAGGTTCATGTGAACTGGGAAATATTCAATATTAAATATCTAGTATTAATGTTTACTCATCTAATTAAGACTTATCTTGAGTCATCCACATTGTGTAATAATTCTGTTGTGTTACATTGAGAGATTTAGGACTATTGATGAATATGTTTGGTGCTACCCTGAGATGCTCTCTATAAGAAAGCAAATGTTTTTAGAAGTTATCAGTAGTATTTATGTTCACTAATCTAGAAAATGCAATATAAAGCACAGTTCATGGTTGCTTAAGGAAGGTAAGATGTGTGTTTTCAGTGAGAAAGGTGTGAGAAATGAAATTGAGTTTGGATGCTCGTAGCAATGAGTGGAAGCGAGTGGAAGCTGAAAACAAGGTCTTCATTTCCCAGGCCAAGAGTCCTGACCATTGGACCACAGCAGCCAATAATTAGGGCTAAGGTCCCTGGTCTTGCCTGCCTAGTCAAGAAAGAATTCAGATGAAGAGGCACAAGGTAAAGAGTAAAGGAAAATGTTTATTGAAAGGAAAAGTACATGCAGAAAGGCACATGGGCTAGCTCAGAGAGAGAGCCCACCTTTGGTAAGTGTCAGTTCTTTTTAAAGGTACAGTTTTCCAGGTCTTTGTCTCCCCTCGGGCCAGTCACCTTCTTTTGTCCCCTCTGGTTAATTTGTCTCAGGCCCCTCCCCTGGGATGTGAATGCACACCCTAACCAAGCTGTATCTCTAAGTTAAGGAAGGCTTCTGGGAGAAGCAAGACTTGTTATGGCCTGAATTACCCTCTGACTTGACCTCAAGCAACCTTTCTGCACATGTGTAGTCACGTCTCTGTTAATAGACAGGGTTTTTTCCTTTCTTTGTCCTTGCCATGATTATTCCCTTGAAGTAAGAGACAAAGACTGGCTATTTACCCTGTATTTGTTGGCTGTAGATTCCTCAACTGGAGCCCAGCTATCTCTTATCTCAGGGAATGCAGAGAGAAGGGTGACATATTGTAGATATCCAATCTGAAGCCCATCTGTCTCCTACATAAAAATTACGTTTTATTACGGAAAAAGAAATTCGGTCTGACTTACAGGTGGCTGTTTACAAATGAAAAAAGTGATTTAAAAAAAAGGAGAGAGGTTTATGGAAAGTGGATGCCAAGGAAAGAGGTCCCAAAGGGTAGGTCTTTCTATGATCTGTAATTTGACTCCTGTCAATGTTGTTGCTTGACTTTGGGGAGCATGTGATGAGGTGTTTCAAAGGGATCTAATTCCTCTTTGTCCTCCTTCTGTGCTGGATTCCGTGGGATGTCCACTTTTTGGTCCATGTCGAGCAATGGTAACACCTCCAGAGCTGTAATCCTGGAGCCAGCCTGGTTCTCTTCCTATTTGCTGCACTTGGGAGACCTCATTGGAAGAAGGGAAGAGAATGGCCAATCTTTGATTGCATTTGGTGTCTCAGATCCTACACAGAGCTGCCTTCAACCTGTCTTCCTGTTCAGAACCCTCAGCTGTTCCTGTTGTTACTGCTTTTACCACAACCTTCACGGGTGTGTGTAACAGGAATGTGGTTTGGATCTTCTGTGATTGTAACTCAGGAAGCCTGTAAGGACAGTGGACTCTGAGATCTTCTCTTGTATCCCGTCTTGGATATATGAATCAGGCTCCAGGTTCCTTCCGTCCATGCTCATACTGTACAGAATGACCCGTGCTCATCCACTGAACCACATTTTCAGGACACGACTTGATATGTGGGGGGGTGGTACTTGGGAAACCATTTCTAGGTGAGATGGCTGAGTAAGGTTGTTAGTTACACAGATCAGTTCTTGTGTCTCACTTGACCTTATGTTTTTAAAGTCCTGAAGTTTGTTGTAACCTTTTGTAATCTGTTCTGCCTAAGTGGGCCCTCGTGATTAAGAACATGTATGAATTTGTAGGTCTGGGTTTCACTCCTGCTTTGCTCTTTACTTTCATGTGCCATGGAGTTGTGTTCATGAACCCTGGGAATCTACTACCTTTATTTGAAAAATTGAGGTAATTCATGCTTTTAGGTGTCATAGAATTTTGACTGTTTTATTAAAAAGGTCAAAAGTTAACTTTTTTTTTTTTTCCTGAACCATGTGGGAGGCGGGATCTTAGTTCTCCACTCAGGGATGGAATCTCTACCCCCTACAGTGTAATCATTTAATGCTGTCCACTAGACCATCAGGAAATTTGCCTCAAAGGTTACTTTTGCTTAAAATGCATATTTACTTCATGTCATGGTTATTGTGACATGTCTCTTTGTTTGCATTACATCCTGTATATTGTTAGTTTACATTTCATTCTGAATAGTTTGTCTCTGACTCTAATTAGTAAGTTTTCAAATAATATTTCTCTTCTATAGCAGATTCTTTACCTCTCAGATGTAAGAAACGCCC TCONS_00087289 s 3' 2640 TCONS_00087289 s 3' 2640 EMBV3_40270 CGCTACTTTCGAGACTACTTTCCCATTCAGAGCCGACCTGGTTCCCACCTACTCCTTTGG Variant GeneID:404129|DGAT2:NM_205793:17_cdna 546^925 1 EMBV3_20315 GeneID:404129 15 GENE DGAT2 NULL diacylglycerol O-acyltransferase homolog 2 (mouse) EMBV3_07565 ACTGGAGAGAAACCTTACGATTGTACTGAATGTGGTAAAGCCTTCAGCCAGGCTACCCGC Gene GeneID:787287|ZNF471:XM_002695474:189_cdna Constitutive 0 NULL GeneID:787287 18 GENE ZNF471 NULL zinc finger protein 471 EMBV3_14110 ATGATATTACTATGCAAAGCTTGCCAAAAGAAGATGGGCTTCATGGGATTGTGAGCTGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10672 TAGAGTGTGAACTTTCAAGGGAGATACACAGGCCACAGGCACAGCCATACCCAACATGGA Gene GeneID:511556|SLC46A2:NM_001024519:26_cdna Constitutive 0 NULL GeneID:511556 8 GENE SLC46A2 TSCOT solute carrier family 46, member 2 EMBV3_33788 AGCTACTTCCAAGAGCAAAAACAGACTTTCTCATGAAACCATTTATCACAATTTACCTGT Gene GeneID:518825|TCHHL1:XM_002686073:330_cdna Constitutive 1 NULL GeneID:518825 3 GENE TCHHL1 NULL trichohyalin-like 1 EMBV3_07931 ACCTTGGTTTTAGCAAGCGGTTTTCTTGATCTTTTTCTTGAATGGTATGATCCCCGGCTG Gene GeneID:509981|NIP7:XM_002694837:742_cdna UTR3_Alt 1 NULL GeneID:509981 18 GENE NIP7 NULL nuclear import 7 homolog (S. cerevisiae) EMBV3_30459 CGCAGGATAAAGGGCGGCTGCATTTCTACGTTAGCATCACCAACCAGGAAGTACTGCTGT Gene GeneID:785567|PNPLA4:NM_001080363:20_cdna Constitutive 0 NULL GeneID:785567 X GENE PNPLA4 NULL patatin-like phospholipase domain containing 4 EMBV3_01619 GTCAGGTGGTGGCCCCGTCGGACATGATGGACGGGGCCCAGGCCGGGGCATTTGATCTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21780 CTTCGGATATCAAAAGCACAAAAGAGACGGTTGACAGCACTAAATCTGGGAAACAACCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09161 AATGTCACTTTTGGCTCGGAAATCAGCTACATCGTGTCACCGGGCCAGTCGCTTCCCCTC Gene GeneID:511958|NCAPD3:XM_002693817:72_cdna Constitutive 0 NULL GeneID:511958 15 GENE NCAPD3 NULL non-SMC condensin II complex, subunit D3 EMBV3_35968 CTTAGCTTGAGTCTGTCCCTTCCCAATTCCAAAAGTAGGAGGAGTGAAGAATGGGGGTGG Gene GeneID:444879|ST3GAL2:NM_001002892:73_cdna Constitutive 0 NULL GeneID:444879 18 GENE ST3GAL2 MGC128985 SIAT4B ST3 beta-galactoside alpha-2,3-sialyltransferase 2 EMBV3_11438 GACGCTGCTGCAGAAAGGAAGAAGTGTTAGGTGCAGCATGTGGTGTCTCAGAACTGCGAC Variant GeneID:505662|SIRT7:NM_001075217:48_cdna 414^486 1 EMBV3_32920 GeneID:505662 19 GENE SIRT7 MGC142712 sirtuin (silent mating type information regulation 2 homolog) 7 (S. cerevisiae) EMBV3_12150 AAGTTTCATTCACTCAGTCATATCCAATTCTTGTGACCCCATAGATTCTAACTTGCCAGG Gene BVV0102_100332 + 0 NULL GK000018.2:60934614-60946258 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00091597 1 XLOC_056371 NonCoding TCONS_00091597 XLOC_056371 NonCoding NonCoding - 18:60880235-60882968 - TSS68943 2733 5 TCONS_00091597_4 55 0.178558360775704 1 0 0 0 0 0 0 0 0 0 0 0.000117151758056085 1.79197396950433e-06 5.12430718582919e-06 4.97811209845313e-05 2.0128246799323e-05 3.2911467640862e-06 0.00121718673807911 0.000619926665901621 0.0010825577678188 0 1.18409913071823e-06 0 0.00149328424900606 2.34173588560905e-05 0.00057218619007165 0 0 7.14618068126918e-07 0.000164091210526429 4.37856026131779e-05 0.000146328486667053 XR_229235.1 LOC101905472 PREDICTED: Bos taurus uncharacterized LOC101905472 (LOC101905472), 1e-68 266 84.46 0.0889132821075741 0 noncoding 0 0 0 0 -0.00983763902114256 0.939547216066802 0.0125281181955004 0.83061414824004 AAGTTCTGATTTGCCCAAGGCTGAGTCAGGTCTAAGGCAAAGTGGACAGTGTATTTCAAGGACACGGAAAGGCCTAACTTCAAGCTTTGCCCTAGGTAGGACTTTTAACAAGCTAGTTGTTTTTAAATGCATATGCAAAAAGAGCCAGCTTTTCAGTTTCCAAGGGAAAGGAAATTTCATTTTAACCAGTTTTCTCCAGAGTCTAAAGAATATCACGGCCATCCTGTGTCAAAAAGTCATCTTTCCTTTCTGTAGTCTTAGTTTTATAGCTAAAATATAGACCAACTAATGCTCAAATTGACTCGGATCTTTCAGCTGATAAAAATTTTGGACTGCCCTTCTGGTGGGAAGTGATGTCTTTGGCCCATTAGAAGAATCTGAAGGGTTAAGGGAATTTGCAGGAGTGGGGGAAGCTTGGTTCTTTCCAGGCCTGAGAAACAGGAGTAGTCAGAAGGGAATTTTTTAGGATGTTCAGGAGTGGGGGAAGCTTGGTTCCCTCTCCACCTGAGAGATCAGCTTCCTTAGAAGGGGATTCTTCAGAATGTTAGGACAGTTTTTGATCCTTCAGGCTTTGGAATATAGAAGAAAGAGCTGGACCAAAGGGAACCTCAGAATGCTTTCCTAGAGATCCTGTGGATATGAAAGGCCGAGTAGGGGTCATCTAGGAAATCTGATGGAGAGACACAGAGAGGGACAGGAGACAGGGAGTCAATAGAACGGAAGGAAATTCTGAGTCTTTCTCATCTTTGGCAAAACCTAGTGTGCCACTCAGAGGCCATTTCTGGGGCTCCCCCATTTGTATTGGAGCCAGGCCTTTTGGAGGGTCAAACTTTTCCAGTTTCTGACAATGTAGCCAAGGGTTGAGAATGAGAGAGCCTCCTGGGATATAACAGAAACCACTCTTAGCCTATCTACCATAGAATGGGAGTACTGAGAGTCACTGGCTGACAGAAAGGCGTCCCTTTTTCCCCAGTGGTCTCTCCGAGTGACTAATGGCACAGAACGGCCGATTGACCCAACAGTCGTGTGCCACAGTGTGAGGTGACCGCTGAGAACCCTGAAGCTAAGTCATCAGGTGACAGGGGCAGAGATAGACAGAGATTCCCTGCAGCAACCAGGTGACTCACCATTTGGTGATTCCCTCAAAAGAGAAGGCACTCTTGGGATGGCTCAGAGGCAACACCCAGGCTCCTGTAAATCAGCCCGGGAAAAAGGGAAAGAAGTGAAAGCGACAGGGAAGAAGGCTGAGGAATCCGCTGTACAATATATCCGGGAGGCGGTGGCCAGGTGAAAATGGTCTCTGTTTGGCCTCAACCACTATGTTCCTGACACGGTGGAAGGAAGTTGTCATGCTGGGGGTGGATGCCCTTGAAATAATGCAAAATCAGTAATGGTGTTCTTACACCTTTTGGCACATATTTTATCAAACAGCCATTGAATAGCAGAGCTTAAACTTTACTTCAGTTTATTTACATTAGATTTTAACTAATAAAATTTTAACTAATGACAGATTCACAGAGACAGCTCTAAGAAAAGGTGAGAGAAGTTTTTGTAACTGTAAAGAATACTAAAGACAAGAAAAGTTTCATTCACTCAGTCATGTCCAATTCTTGTGACCCCATAGATTCTAACTTGCCAGGTTCATTTGTCCAAGAAATTCCCAAACAGGAATACTGGACTGGGTAGTCATTGCCTTCCACAGAGTTCTTCAAAAAAAACTAACCAAAAAAAAAAAAAAGAAGAAGAAAAGAAAATTGATCAAGTCATGCTAATATTTTCATACATACAGTCCAGTTCAGTTCAGTCGCTCAATCGTGTCCACCTCTTTGGGATCCCATGGATCCCGGGGCTTCCTGTCAGTCACCAACTCCCGGAGCCTAGTCAAACTCATCTCCACTGAGTACAGACATACACTCAAATAGGGCTATATACTCATTAGGAGGAAGAGAGAAAAAGTTTCCTGTCACTAAACTCAGGTAATTATGAATGGATTAAAAATGTGCTGTAGTTTTAATACATTTTAAAATACAGCAATGAGCTGTATTTTAAATTTTAATACAGTTGAGCATAGATTAGGACTAATAAGATTCTTGTGAACATTTTGGAAAATACAAAGCTGTGATGAGACTCTGTGATGTGAGCATGGAGTGTACTGGAAAAGATCAGGCCTGGGCTTGGGATGAAAACCGCCACTCCTCAAACCCAGTATCTCTGCTAAACACAGGTGAGTGTTCAAGTCAACTGGAGAAAAACAAATTCATAGCATGGGAATCTCACAGAAACACCTAAACCATTGAACATGTCATGGAGTAAGAAGTACATGGAGGAATGCATTATCATTGCATGGGTATTTTGGCACTATTATGGAAACTATGATCTCAATCTATCATTAAAAAATATTAGTTTGGGCACTTCGTGATGATCCAGTGACTAAGACTCTGAGATCCCTATGCACAGCGCTCTGGTTCTTTCCTGATCAGGAAACTGGAACCCACATATTGTAGCTGAGTTTACATGTCAGAATCAAAGAAGCTGAAAATTACGATACTGAAGATCCTACCTCCCACAACGAAGACCCAGTGCAGCCATATAAATAAATACATTTAAAATGTGTCATAAGCAGATTTCACTTCATATATGCCTTTCCCGATCTGTGGCTTAATTTTGGAAGGACTGATGCTAAAGCTGAAACTCCAATACTCTGGCCACCGCATGTGAAGAGTTGACTCATTG TCONS_00087432 . 3' 5451 TCONS_00087432 . 3' 8183 EMBV3_05108 CAGCCCAATCCCGTCTATAAGGAGACCTTTGTTTTCCAGGTGGCCCTCTTTCAGCTGTCT Gene GeneID:540677|SYT16:XM_002691053:462_cdna Constitutive 0 NULL GeneID:540677 10 GENE SYT16 NULL synaptotagmin XVI EMBV3_08621 GACTAAGATGGTGGAGGAGCATTTCTACTGGTGACAAGAAGTACATCATGGGGCCCAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27029 CAGCAAGAGAAGTAGAAATAGCAGAAGTGCAAGTCGATCAAGGTCAAGAACACGATCACG Gene GeneID:514613|MCM2:XM_002684963:238_cdna UTR3_Alt 2 NULL GeneID:514613 1 GENE MCM2 CCNL1 cyclin L1 EMBV3_41828 CCTGTTCACCACACCTCCTTATAACATATCTCTCACCACCCCAGCCACCTGCTGAGCCCT Gene BVV0102_280942 + 0 NULL GK000013.2:65405857-65425512 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36637 AGGGGGTTATTGAAGCAGGATCATTTCAAGGTAGCCAGAGAACACAGACAAAAAGTGGTC Variant GeneID:507386|ARFIP1:NM_001083650:11_cdna 409^504 4 EMBV3_02886 GeneID:507386 17 GENE ARFIP1 MGC151527 ADP-ribosylation factor interacting protein 1 EMBV3_08710 CTGGCCTTGGATGAGTATATACACAAGTCCACCGAATCATAGTACAAGTTATTCATCAAG Gene GeneID:527318|PACRGL:XM_002688151:22_cdna Constitutive 0 NULL GeneID:527318 6 GENE PACRGL NULL PARK2 co-regulated-like EMBV3_01416 TTGAGAAATACTGAGGGTGATGGCCTGTTCCCCACCAGGGTACCGAGGACTGCTGAGTCA Gene BVV0102_299990 - 1 EMBV3_24391 GK000020.2:33774649-34415200 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24071 CCTTGGATTCAACTATATCATTGGAGGCTCGTACCGTTGGCTACCCAGCAGGAGAGGAGG Variant GeneID:404121|DERL1:NM_205789:14_cdna 608^718 1 EMBV3_14530 GeneID:404121 14 GENE DERL1 MGC137834 Der1-like domain family, member 1 EMBV3_15444 CCTGGCCTTCTACCTCGACCGTGATGATGTGGCCTTGAAGCACTTCCACCGCTTCTTCCT Gene GeneID:618304|LOC618304:XM_002700237:230_cdna Constitutive 0 NULL GeneID:618304 X GENE LOC618304 NULL similar to ferritin heavy chain EMBV3_01330 ACCAGAGAGGATGCAGCAAAAGTGGCCATCTGCCGCCAGGAAGAGAGTTTGTACCAGAAA Gene BVT0102_097607 + 0 NULL GK000030.2:137216824-137548559 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248494 TCONS_00248493 TCONS_00248492 1 XLOC_151603 NonCoding TCONS_00248494 XLOC_151603 NonCoding NonCoding - X:137254180-137277480 - TSS185823 318 1 TCONS_00248494_1 52 0.647798742138365 3 0.986480106442337 0.00113892182804429 0.000961332409235021 0.00149302401997683 0.000833462260408938 0.000937725398786119 0.000607424556893053 0.000303563976604975 0.000517693330791096 0.000608302064165493 1.07798180677329e-06 0 2.18622196809059e-06 2.43701788825273e-05 2.30104693746352e-05 0.000417992592137696 0 0 0 0.000457964578501484 0.000433880354616257 8.10906122832822e-05 0 0 0 0.00080315843750729 0.000384830150377022 0.000396385516795702 0 1.69622872635763e-06 0 XR_231990.1 LOC101902805 PREDICTED: Bos taurus uncharacterized LOC101902805 (LOC101902805), 2e-09 66.2 80.82 0.223270440251572 NR_038987.1 LOC100507489 Homo sapiens uncharacterized LOC100507489 (LOC100507489), 4e-06 55.4 76.71 0.226415094339623 0 noncoding 0 0 0 0 0.00707391780402299 0.970449570261161 0.0414516279228809 0.413467174623487 GGTCAGCTGAGAGAGGTACTAATTCGCTAGCCCTGGTGTTCTTGGAAGAAGAGGAAGAAGAAACCCAGCCCCTTCCTTCTCCACCAGAGAGGATGCAGCAAAAGTGGCCATCTGCCGCCAGGAAGAGAGTTTGTACCAGAAACCCACCCCGACGGCCCCTTGCTTTGAGACTTGCAGACTCCAGAACTAGTGCCATCCAGGATGCCACGACAGTAGATCATCCTGTCCCCTGGAGCTTCCCTTGGCTGTGACGGTTGGTCGGGCTCTCCTTGCTTTTCAAGACCTTGACAGTTTGGAGGAGAACTGGTCAGGAAAACC TCONS_00248491 TCONS_00248490 s 5' 108761 TCONS_00248491 TCONS_00248490 s 5' 108767 EMBV3_23674 CATGATCCTTTGCAGAAACGACTACATTAGGTCTGCTAAAAGGTCAGAGTAATGCAGAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29415 GCTAGAAGCAGAGGGGTGATAGAAACACAGTCATACAGAACCACAGTCATCGTGAACAGC Gene BVV0102_158550 - 1 EMBV3_10989 GK000010.2:30367053-30432599 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020312 1 XLOC_010989 Coding TCONS_00020312 XLOC_010989 Coding Coding - 10:30425279-30429486 - TSS14202 4207 2 TCONS_00020312_2 142 0.363679581649632 1 0 0.000155234895149308 0.00032961345847518 0.000131979957579088 0.000343456343169681 0.000346201535369669 4.76146846438322e-05 0.000113667693523797 0.000278372826727586 0.000161291141962578 0 1.36034358842491e-05 0 2.04607560915542e-06 6.26156105817387e-05 4.19831645535363e-05 0.000244842160656586 2.95975965243473e-05 0.00247509655751243 0.000116475851510986 0.000430768601785536 3.03067596175358e-05 3.88055989618687e-05 0.000340183154241849 0.000816913584237208 0.000270365934539639 0.000472265885213533 0.000110024384830036 0.000155253209064678 1.38471990525599e-05 0.000134336368197567 XM_003584303.2 TBC1D8B PREDICTED: Bos taurus TBC1 domain family, member 8B (with GRAM domain) (TBC1D8B), mRNA. 5e-31 141 69.92 0.0827192773948182 NM_145702.1 TIGD1 Homo sapiens tigger transposable element derived 1 (TIGD1), mRNA. 1e-20 107 80.17 0.0285238887568338 0 coding 0 0 0 0 0.0369725387219043 0.870959579234563 -0.0105622854855462 0.863286058805866 CTTCTTTTATGGATTTTCAATTGGGAGACTGGAATCGACATAAATATATATACTATCTATAAAACAGATAACTAAAGAGTGGCCAATATCTTGAAGAATATAGCTAAGGGAGAATACACAACCAGACGTCAAGATTTAATATAGAGCTGCAGTAATTAAACCAGTGAAATGCTGGCACCAAAAAAGAAAAATAGAACAATGAAACTATTTCAGAAACAGACCCACAGATACACAATTATTTGATTTGTGACAAAGGCTACAGAACAGTGCACTGAAGATACTACTTTTTTATGGATCCTACTTTTTAACAATTGAAGGTTTGTGGCAACCTGGCATCCATTAGTGTCACTTCTCCAACAGCATTTGCTCACTTTGTGTCTCTGTGCTACATTTTAGTAATTGTTATAATACTTCATACTGTTTTCATTATTGTTATATTTATTATGGTGATCTGTGATCCTGCATGTTATTACTACAAAAAGATTATGACTCGCTAAATGTTAAGATGATGGTTAGAGATTTTTTTTGTAATATTAAACGAAGGTGTGTACATCTTTTTAGACATAATGCTATTTAGCATACTTAATAGACTACATTTTAGTGTAAACAACTTTTATATGTACTAGGGAGCTGAAATATTGTGACTCATTTTATTGTAATATTCAATTTATTGTAGTGGTCTGGAACACACACAGAGTATCTCTGAGGTATGCCTATAATAGTAATTCAAAGTGCAGGTCTTGGTACATTCTAACTTTTCCCTTATCATTTACTACAGTCTTTCAAAATTGCTATTTAACCTCTTTTGGCTTTGCTTAAAAATAAAAAATAGCTTTAGGATAATTAACTAGCATTTTGACAATTAAACATTACTTACTACAGTCCCTTCACATTATATGTTTCTCATACTCTTTTCAATCCAAAAGAAATATTAATTTGGCTTTCACCCTTAAGTATAAACACTGTAAACATCAAAGCGTATCTTTTTTTATAGACCTCTTATTCTCTATCCTGATTCTGGCAACCTAGTCTTCTCTTTGGTATTCTAAGCCTGGGAGGAATTCTTTTTTTTTTTTCTGGCCACACTGCACAGCTTGTGGGATCTCAGCTCCCTGACCCGGCATTGAACTCTGGGACCGTGGCAGTGAAAATGTGGAGTCTTACCCCCTGGACCACCAGGGAATTCCCGCGAGAGGAACTCTTTGGTAGGTTTGCCTTACTCATCTGTGAGGTGAGGGATCTGCCTGCTTATCAGATGGTGGTTCTCGTCCCAGTTAAACTAACCATCGTGTCCGAGGCAAACCAGCCAATGCCTCGGTGCTTCTCCTCTATGAACTATGGCATTGTTGCCTGTCACACAGGAGAGACTCAGTCTAGGAATAGTCAAGAATTAGACCGTTTCAAAGATATCTTCCAACAGTTTATTATGTATAACTTAATTCACTTCTGTGACAAGCAGTCAACCAGCAAAGTAAAATGTAAATTAACCTCGTCTATTCTTGTTCCACTACTGTTTCTGGGGAAGTCTGGGGTTAGAAGAAACCAGCACTGGGAAGTGCTGCTAGAAGCAGAGGGGTGATAGAAACACAGTCATACAGAACCACAGTCATCGTGAACAGCTGAACTAAAAGCCAGAAGAAAACTCCCCTCAAAGTGAATGAATGCCTGGAGAAGAAAAAGATAATATTTTATATGACCACCTTCTACCAGGAACTCTTGACTTTTTTAAAAAAAAGGTTGATAAAATCAGTTTCTCAAAATAGCTATTCATATTAAACCAGGCATCTCCCAAGGAGAAACAGCTACCATTGAAGTTCTTGCCCTTAGATTTACTGTGAGATGAGGTCTCAGGTGAATGTACCAAGTTAAGTCAAAGATGGAGAGAAAGAGAGAAGTGGGCAGTCATCTCTGGAGATCAACTAAGAGAGAATTCAACATGTCTGATGCAAGGTAAGTTTTGGGGTCTTCTCTCTTACATTTTTCTGAAAGGAAATTTTTTCATGTTTTATATTTGTCTAAATTTTCTTCTATTATTTCTGGTGCACCCCCGTTGCCCATGTTAAATCCTCTCCCTTTTTGAAACAAACTTTTAAAGAAAACACACATTTAGAGAACTGAGAAAACAACACACATTGGAAATACATAGACTGTTCTTTTACTGCAGAGTAAAAAAAATGAGAAAAAGTTGGTGTGAAATCTTGGAGCCTAAAATTAAAATGTAAACAGAAAATGCTCAGTGACCTTTTCTTCGAAGGCTCACATGAACAAATGTCATGGTACACTGATCAAATTTTTACTCATTTGCATTTTCAGGATGTTGCTATTAATACCACATGACACTCAACAAATTACACTATGACATTTTGTACAAATCACTTCACCTCTAGATTCTTCTGCTGTTACTTGAGCCTCTGGTTACTTGTGGAAAAACAATGTATTAAAGTCTTATTTTTGTAGGGGAGACAAAACTTTTCCTCTGCCTTCTTAGGTCTGTAACTGGGGCCTATGAATTAAGTTGATAAAAGACAAATTGATAGGAGAAACGGCATATAAATTTAATTGATGTTTTTTAACTTTACTTCCATGGAGTTGCACAGAAAAGAAGTAAAAATTCCACCCAGACTATTAGGCTTCTAAGCTTATATACTATTTTAACAAAAGATAATAAATTATGGAAAAGTAAATAAGGCAAAAAAAGGAGTTTGAGTTTTTAGGGGTTGTAAATTGTGGGAAAGTAAATATATGGGGAAATTAATGGAAGATAAGGGTGAGTTATTTTAGTAAGGTTTATGCAGACTCATTTCAGCATCATCTCTGTGTGTAGTAATAAGGGGTGTTTTCTTCCTAGTTCAGGAGAGAGGGGACATCTTTACAAAGGGAAATTCATGCCCTGCTTTCAGGCAGAAGCAAAAGGACTGAGAAAACTTCCTGTATCTGCGTCTTCTCAACTGCCTTCAGCTCAAAATATTCCTTTTGCCAAAGCAGCATTTTTGGGGCTTGTATATTCTTACCCCCCTAATTTTCTAAGGAGGAATCAAAGTTCATTTGCTAATGTAAAAATATCAAACCTCAGAACCAGTTCCCTGGAATGTCTTAATTTAAAGAAGAAAAAGAAAGAGTTCCAATGTCAAATAAGTTTGAGAAATGCTAGATTAAATAAAGTTAACTTGATTTTTTTCCAGCAGTAAATAACCTTTCATTAACTAACAATGCACTATTAGTCTACAAATGGGGAATAATAATTAATTATGTTCCTCAAACTTATTTGACCATGGAACGTGTTTTTTTCCAAGTATTCTTTCAGATGAATGGTTTTTGTAACATATGTTGAGAAATACTGGGATCAGCCATCTGTATATGTAAGTGCAAAAGTTTAAGTAGGCAGTGATGTTAAATGGAAACAAAAAGGCAGAGCCAGCAATAAAGCTGTCAGTCTGCACAGCAACTGTGCTGCATTCTGAGTCATGCTCCAGAAGGCTGAGCTGGGGTTTGTCTCTATGAAGGAAGACAAGAATGTCCAAAGCTTTTGGATACTTCTGAATTAGAACCCTTTCTTGGGCACTGAAGAGTAGCAATGGATAAAGAAAAAACAGTCTCACATGCTCATTTCCATTACTGGCTCAGTACAGCTCCAGTTGTTATCATTCTTAAACATCTATTAACATGACTGCTTCATAATTACAAAGGCTAACAGCCAAGCATTTTTCACAGGAAGCAAAGCACTGCCTGTTTTTAAGAGCTTTTCTGACGTGTGCAAAAAGGTCGTTTTTTTTTTTTTTTTTTTCAATCTGTTTAATCTTATTTTAATTGAAGAAACATCTCTAAAACACTATATGAGTGACTGCAAGATGAAAAGGAAAAAGCATATTCAAGCTAGATAAGTGCAATAATATAGATGATCTTGAGGTGGGTGATACAGGATACAGAACTGATGTTATCAGTACATCCCAAGCACAATGATACCTAGCGTCTTCATCTGCCAGATATTTTAATTTCAGCAGAGACCTTCCTCAATGTTGTTATGGGCTGATTTCAAGGTTCTGAATCAGTAAATTTGACCCTTGATCTCAAATGTCAACTGCCGCCACGTTTGGCCTTCTTCGTCGTCCTCCATACTCCCTGGGTGGGGGCATAGCTAAGTGCTCGAGTCAGAGAATTATTTGGTAATAAAAGATTTGGAGGAAAATGGAGGGCGGGGGTGGGGTGG TCONS_00016653 TCONS_00016652 . 3' 3112 TCONS_00016653 TCONS_00016652 . 3' 7318 EMBV3_14049 CTCATGGAAAAAGCTGGGCTTTTCTTGTCGGTGTTGTTGTCGCTGTAGTGATGACTTCAC Gene GeneID:100140471|LRRC19:XM_002689496:31_cdna Constitutive 0 NULL GeneID:100140471 8 GENE LRRC19 NULL leucine rich repeat containing 19 EMBV3_12033 CGTGCGGCTGGTGTCGGCAGGAGTAGGAAGAGCTGTTTATTGACTTTGCCTGAGAATAAA Gene GeneID:617776|LOC617776:NM_001105635:135_cdna Constitutive 1 NULL GeneID:617776 19 GENE LOC617776 MGC151752 hypothetical LOC617776 EMBV3_21224 GCTCCGGCGCCTAGACAAATTGCAAAGGTTAATGTTTCTGGGAAATAATAAGCCTCGGGG Gene GeneID:540885|IBTK:XM_002690046:7_cdna UTR3_Alt 2 NULL GeneID:540885 9 GENE IBTK NULL inhibitor of Bruton agammaglobulinemia tyrosine kinase EMBV3_13871 GTGGGTTACCATAATGAACACCACGACTTTCCCAACATTCCCGGAAAAAGCCTTCCCCTG Gene GeneID:507290|DEGS1:NM_001034289:26_cdna Constitutive 0 NULL GeneID:507290 16 GENE DEGS1 DES1 MGC128422 degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) EMBV3_26538 TCCACAGCACTGGGAAAGTTAGGGTATTGTCAAATGAGGTGGCTACCCAGGAGGCAGAAT Gene BVT0102_071033 + 0 NULL GK000002.2:4149373-4175652 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104354 TCONS_00104353 1 XLOC_062356 NonCoding TCONS_00104353 XLOC_062356 NonCoding NonCoding LOC100848016 2:4149558-4151864 = TSS77286 2257 2 TCONS_00104353_1 108 2 0.0216919739696312 7.23365323597555e-05 9.32561610334376e-12 6.7942423118204e-11 5.88508048896078e-05 1.77516690829383e-05 7.44244953608002e-12 1.98444923801662e-11 3.37707958856661e-12 1.0278608537764e-35 1.21532467400662e-07 1.11293586492974e-05 7.9213085505155e-06 1.99522717604035e-11 0 7.57059502498404e-07 0.00505193733351863 0.000941554509265464 0.00338880970075917 2.64453956504246e-09 3.70231475004697e-05 1.23575006766502e-11 0.00158474218212314 0.00103354500922937 0.00279456241571828 5.84305798665731e-05 0 0 0.00036049003275572 7.9198319571618e-05 0.000580709536406544 NM_004807.2 HS6ST1 Homo sapiens heparan sulfate 6-O-sulfotransferase 1 (HS6ST1), mRNA. 2e-76 291 83.99 0.122286220646876 0 noncoding 0 0 0 0 -0.00227699896412287 0.985225313978249 0.0131285591962157 0.801149131218997 TGCTCCTTTTCAGGGTTTATTTCATCTGCTAACATTCATCTTGACCTAGACAAAAACAATTAGATGATTATGACTTGCGTTTCCATCAACTCATTTTTTTGTATGAGTCACCAAAAGGTTTCTTCTCAACACTTTTTTTTTTTTTTTTAATAAGAAGCTATAAATAAATAAAGCTTTAAACGCTCCTGGGTTCAAGTTAAAGACTTCCAGTTCCCAAAAAAGTTCACAGACTCATTGCTCGGACAGTACTGCTGTCCCTGACTCCTCCTCCGAGAGAGGGCGCTGCAGGCCGGCATGGGGAGGGAGCTGTCCGCTCTCCGCACGTTTGCTTCTGTCCCTCGGCCCTGGGAAGAGGCCGGGAGGCCACCTTTCCTGAAGCCCCAGCCCATGGTGTCGGAGGAGATGCTGCAGGATGGGAGGCCCCAGCAGCTGAGGGTGACGCCAGCTGTGACCCTCACTGGCACCCATCAGGGTGTTGGCCGGAGCCGGGACCACCTCCTCGATGCAGTGGGGAAGCCGAGGAGACCGTGTGACTTGGGACAACGGGCCATAAGCTACAACGTTCCATTATGTACAAACAGATCCTGCACTCAGGCCCTCACACTCAGGAGCCCGCCTTGAGGAGGGTTGATGCAGCCAGGTTACTGGCTGGGTGCCAGGGGCTCAGGCAGAACAGGGCTGAGCTCTCCTCCTAGTGGGAGGCCACTGCACATGCTTGAGTGAGCCCTCAGGGCGCTTGTGAACCTGGAGCACGCCCACCTCACATAAGTATCAGCAGATCCCCACGCTGACTCTCACATCCCTTCAAAAGAGCCACTCAGTCACCTGGCGCTCACTCCTCAGCATGATGCGTCCACTCTGGGGGTCTGCTGACTGCTCTGCCCTTGAACTGCAGGATGAAGTGGCCAGTGGCATAGGAAGCCCCTGTGCCAGACAAGCGATAACGATTCTGCCTCCTGGGTAGCCACCTCATTTGACAATACCCTAACTTTCCCAGTGCTGTGGAAGGGTCCCCGCTCCCACTCTCTCACTCCACAGTAGGGCAGCTGGGGTGGCTGGGGGAGCCTGAGGCAGAGAACCTCAGGGGGATCTGCCCAGGAGGCTGCTGTGGCCCGTGGCCCTCACCTCCTTGAGTCACGTATGAGTCCTCTGTTGGACAGAAGAGCAGCCTGTCCACCTCAGGTGTGGGGCTCACACTCAGCTCCCCAGATCTCAGGTCTCACATGGATGGGGCTACTTCCAGAGGTGACGCTGGCCTGGCCCCCTCGAATATCAGAGGGATGGGAATGGGGCAAGCGTTTGCAATGGACTGAACATGGCTTCTCCAATCGGCAGGGCTGTGGGGACAGGCCTGACCAGCTGGTGTGGGCAAGGGCGCAGGAAAATGCGGGGAGAGGCTGGGATGGGGGTTTGTGTATCTGGGCATAATGAAGCCACCCAGAGTTTCTTCCAACTCTAGCTGAGAATCTGAAAGAACTGTGTACCCTATCCTGGCTGTGCTGAGACAACATGACCCCAAACTATGGCTTGTGGGCACGGCCATAGTCTGCAGTGTTCTAGCCAACGGAGGCCTGACTGAACTTTATACACAGGGTTCTGGGGGCAATGGGGTGTAACCTCAAATAAACGTCCAAGTGGTGGGCTTGGAGCCAGGGGCAGTCCACTAACAAAGCCCAGAGGGTCAGGAGGGAGACCGGGGTCAGGTGGATCTCCTGATTTCCACCCCCTTCCTGTCTGAGCTGCAGGCTGGGTGGTCTGCTCGGTCACAGGCAGCACCGTCCTCAGCCACGGCCTTCCTACTCCTGGGATGCCCTCTGCCCGTGGGAGGGGGGCACTGCAGTGTGGGGCTATCCCCCCACAGCTCCCCTCAGTCTAGGGACTGCAGACAGTGGGGTGGGGGACCCCAGGCAATGTGCTTTGATCTCCTCACCCAAAGCATGAAGCCACACTGTGGGTTTTGACCTTGGGCTAGAGAGGGGAGTGGGCTGCCCAGGGGCTAGACTAGAAACGTCTTGGCTTTACACGAGGTGCGCCCTGACCTTGAAGACGGGTGAGCTGAGAGCTCCGTTCCTGAGGCCACCTCAGAGGGCTGCCTGTGTCCCCCAAAGGCCCTCGGGCAAGGGTTTCCCTGGAGGCTGAGGGGCTGCTGGGTGGCCTGAGGCTGGGGGAGGTGGCCGTGTGCCTGGCGGACATGCCACACACCTGACCTGGCAGGGCTGTTCTCCACCACACAGGCCTTTTCTAGTCTTCAAACCTG EMBV3_04187 TCACACTGGAGAGAAACTTCTTGAATGTAAGCACTGTGGGAAAGCCTTCAATTGGCCCAC Gene GeneID:783540|ZNF564:XM_002688775:112_cdna Constitutive 0 NULL GeneID:783540 7 GENE ZNF564 NULL zinc finger protein 564 EMBV3_09806 TGGCTGAGTTTGGAGAATACATTCGTAAAGGCAATCCTGCAGGCCTTGGAGCTTCTGCTG Variant GeneID:513852|PM20D1:NM_001038100:58_cdna 326^558 1 EMBV3_19287 GeneID:513852 16 GENE PM20D1 MGC133795 peptidase M20 domain containing 1 EMBV3_23602 TACTACTGCTTCATCACGCTCACCACCATCGGCTTCGGCGACTTTGTGGCGCTGCAGAAC Gene GeneID:539593|KCNK15:XM_002692327:104_cdna Constitutive 0 NULL GeneID:539593 13 GENE KCNK15 NULL potassium channel, subfamily K, member 15 EMBV3_26225 CTCAAGAAAGGCCCTTAGCCCCCATCTTTGATTCCTATGCCTGAGGGAAGGTCAAGATTC Gene BVV0102_385717 + 1 EMBV3_43556 GK000030.2:59774049-59804946 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247100 1 XLOC_151228 Coding TCONS_00247100 XLOC_151228 Coding Coding PRPS1 X:59801236-59827385 j TSS185130 4051 1 TCONS_00247100_2 299 0.153789187854851 7 0.845341899954107 3.91380730823412e-11 3.28292123930241e-11 8.50235115039549e-12 1.54744822960459e-05 1.03621556215506e-06 8.74459919853836e-12 1.06759335986349e-11 1.67885824603558e-06 2.31120725654745e-06 0.000559556756514324 0.000299267726151614 1.96533721120748e-05 0.000201719314827529 0.000204556630700753 0.000574278816989933 0.00137002838914206 0.000557127905050408 0.00550266883250882 5.79249090156131e-07 0 9.66059270701676e-12 0.00028487602528709 0.000472699991179415 0.00142196983368838 3.31555975630902e-11 4.22775822169387e-12 9.50442382284149e-07 0.000420671006229131 0.000342871254193879 0.000372615772636084 NM_001046189.2 PRPS1 Bos taurus phosphoribosyl pyrophosphate synthetase 1 (PRPS1), mRNA. 0.0 1837 100.00 0.251049123673167 NM_002764.3 PRPS1 Homo sapiens phosphoribosyl pyrophosphate synthetase 1 (PRPS1), 0.0 1433 91.63 0.249814860528265 TCONS_00247100_2 sp|Q2HJ58|PRPS1_BOVIN PRPS1_BOVIN Ribose-phosphate pyrophosphokinase 1; 0.0 596 99.66 0.966555183946488 3 coding 0 0 0 0 0.0206750904888913 0.866205503337608 -0.04031870628135 0.658230730927779 GGGCGATTTAGAGCCGCGCACCGGGCGGGAATGTAAGATGGCGGAGTAGAAACGCGAGTGCTTAGTACTGAGTCTCAGGGCCGACTCGGTTCGGGTCTCGGAGGCAGCACCAGTGATCGTTAAGCAAAGAGAGCCTAGGGTAGTTGGCCAAGATGCCGAATATCAAAATCTTCAGCGGCAGCTCCCACCAGGACCTATCCCAGAAGATTGCCGACCGCCTGGGCCTGGAACTGGGCAAGGTGGTGACTAAGAAATTCAGCAACCAGGAGACCTGTGTGGAAATCGGAGAAAGTGTTCGTGGAGAAGATGTCTACATTGTTCAGAGTGGCTGCGGTGAAATCAATGACAATCTCATGGAACTTTTGATTATGATTAATGCCTGCAAGATTGCTTCAGCCAGCCGGGTTACTGCAGTCATCCCGTGCTTCCCTTATGCCCGGCAGGATAAGAAGGATAAGAGCCGGGCTCCAATCTCAGCCAAGCTGGTTGCAAATATGCTGTCTGTAGCAGGCGCGGATCATATTATCACCATGGACCTTCATGCTTCTCAAATTCAGGGCTTTTTTGATATCCCAGTCGACAATTTGTATGCAGAGCCAGCGGTCCTCAAGTGGATAAGGGAGAACATCTCTGAGTGGAGGAACTGCACAATTGTCTCACCTGATGCTGGAGGAGCAAAGAGAGTGACTTCCATCGCAGACCGGTTGAATGTGGACTTTGCCTTGATTCACAAAGAACGGAAGAAGGCCAATGAAGTGGACCGCATGGTGCTCGTAGGAGACGTGAAGGACCGTGTGGCCATCCTCGTGGATGACATGGCTGACACTTGTGGCACAATCTGCCATGCAGCTGACAAACTTCTCTCAGCTGGAGCCACCAGGGTTTATGCTATCCTGACTCATGGAATCTTTTCTGGCCCAGCCATTTCTCGTATTAATAATGCATGCTTTGAAGCAGTAGTAGTCACCAATACCATACCTCAGGAGGATAAGATGAAGCATTGCTCCAAAATACAGGTCTTTGCTCTGGGGCCAGCTGACATGGAACACTGATGCCATAAATTGCTGATTCTGCTATTTCTTGAAGTATTGGGTCAGTGAATCAGGGTTTGCTAGGTCAGAATTTTTTTGACATCAAGACCCTCTTCTCTGGGCCTTGGGCAATCCAGTTTCTAGGATGAGGTTTTGAGGCCCTCAAGAAAGGCCCTTAGCCCCCATCTTTGATTCCTATGCCTGAGGGAAGGTCAAGATTCAATTCCCTGTGACACCCAGCAGTGCCTGAAGTACTGCCAGGACTGTTTTTTTCCTCCAGTGAGAGAGTCCCAAGTGTCCTGGATGGCAAGCAATTCTTAACTGGAGAACAGTAGCAGGAACAGGCCTGGAGGGGCCAGGGAGGAGGCACAAAAGCTGAATGGAGTTGCAAGGAAAGCACGGTTTAGAAGAAACTGTAGCCTTAATAGCTGTGTAATTACTTCTGAGCAAAAGACATCACCAGGTTTAATTTCACATGCCCTCACCTCCCCTTACCCTTAGAACCAGAGAAAAGGAGATTACTTAGACCAAGGCTGAACTGGGCAACTCTCAAACCTAATGTCTTTATCAGAGGTTTATTTCATCTCAAGTTGGGGCTTTTCCAGATTTGAAATAAAAGCATTTTCTGCTCGAGTTTTTTTAACTTGCCCATCAATAGTATGTAGCCCTTAACCTGAGGGTTATTAGAATCATGTAAAAGTTGAAATTAAAGAAAAAGCTCTCCTATTAACTTGCCCTCCTACCATCTCGCTCTTGGTTGTGGGGGAGGGGGAAGAGACCTCCAGAAAGAAGTCACGTTGTGGGCTGTGGGGGCAGGATAGAAAGCACTGTATTGCCACCCCGAGGCCCCACCGCTTGGACTGGAGACCACTAAAAGTGTAAGTACCCTATTTGCAAGAATAGCCCTTATGTCCGCGGTCAGAAATTGGAGCCAGCCCCCTACCCTGGCTTGAATCTGCACCTCCAGTCTTAAGATGGATGCTTCTTCAGCCCTGATGATTGGCTCTTGCAGCCCTGAGCCCCAGTCTCCTCTGTGTCTGGTTTTCCCTTGCCCCGCCTTTGCCAGGGATTCATTTTCATTACCATGAAAAAAGGCACAGGCCTTTTTCAACCTGTGCATCAAGGACCAAAAGAGGTCCTTATAGGAGGGCCCTGTGTCGGATCCTCTAAGGATTGCAAAGGGGCTTCCCCTGGTGGCTCCGTGGTAAAGAATCCGCCTGCCATTGTAGGAGACTTGGGTTTTTAAATTATTGGTTTGGCGGTGCTGGGTTTGAGTTGTGGCACGCAGAATCTTCTATCTTTGTTGCAGTGTGCAGGATCTTTAGTTGTAGCATGTGAACTCTGAGTTGTGGTATGTAGGATCTAGTTCCCTGACCAGGGTTCAAACCCAGGCCCCTTGCATTGGGAGCGTGGAGTCCTCGCCACTGGACCACAAGGGAAGCCTGAAACAGGTTCTTTTGACGGTCATGATTGAAATGGAGCTACAGCTAAAGATTCTTCCTCCTGCTTTATTCTTTGGCTAGGTTTTGAGGCTTGTTTTCTCTTGGGCTTTTCTTGCAGGTCTTACACGCCTTGTTTAAAAATAAAGCAAATTCTCCAAATTATGACAGATTTTTGATGACTTGATGTTCTGTAAAATCTTGCTTGGTTCAAATATTTCTTCTAAAAAATCACCTTTTCCAAAGTCTAGGTCTTGGTAGGACAACTGCAGGGGAGTTAAGATGCTAATAGGTATGTTCAGGTCCCTTGTACTAGGCACACATGAGAGTTAGGATCCATCAGGCCTTGCCATTGGTTCTTGGGTTGCCCTTCTGGGGTGATTTCTGCTGGGGCAAGTGATGTTAGCTGCCTCAGACCTTTATGCTGTTAAGAAAAACCTGTTGTTAGAAAAACGTATTTCAGGGATAAAATTGAATGTAAGGCCAGGTGTTGTCGAATCTCAAGGAAATTGCAGTGTAAAGTCAGTTTCTCATAAATCTGATAACCAGGAGACTGATTTGAGGTAACATTGGGGCTTTCCTGGTGGCTCAGAGGTTAAAGCGTCTGCCTCCAATGCAGGAGACCCAGGTTCGATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGTAACCCACTCCAGTATTCTTGCCTGCAGAATCCCATGGATGGAGAAGCCTGGTAGGCTACAGTCCACGGGGAAAGAGTCGGACATGACTGAGCGACTTTACTTTCACTTTCTTTTGGTTCATTTGGATGGTGGTGGGCCCACTGTATGCTTTTTTCTTTTGGCTGCACTTTGTGGCTTGCAAGATCTTAGCTCCCCAACAAAGGATTGGACCCAGGCCCGGCAGTGAAAGAGCTGAGTCCTAACCACAGGACCACCAGGAATCCCCTTGAGTGTATGTTTTTGTTTTTGTTTTTATTGGAAGATAATTGCTCTACAATGTTGTGTTGGTATCTGTCATACATCAGCATGAATCAGTATAAATACTTCCCCTCCATCCCTTGAGTGTATGTTAATGAGAAGGATTGAAATGAAGGGCGGGAGATACAGAGGGTGATATCAACCTACAGAGGTTAAAAGAAGCAAGGGTAGGGTTCTTTCCTTAAAGCTTTCAGGAAGTTGAATTGACCTCTAAGATTGCAAAGGCCTTGCAGGGGCTGAACAGGCCCTGCTGCTTCTCCCTTCCCGAGGCTGCTTTCCTGTCTCAGCACTGAGGGCCTGTCCACCACCTTCCATTCCCCCAACCCCCATTCTCCTGCCTGGATGCCCTTAGTCTCTGATGTTCCTAAGGACATTGATTATGCCATGAAGGTCTTTAGGCCCTGTGTTTTTGAGTATGTTGCCTTGGTTTTTAGCTTCCAGAATGAAAGGAAAGGAAACCCAGAGGGGCAGGGAAACTTTCCATCCCAACCCTTGGTAACCTTACCCGCCCCAGAGCCTCAGAAAGCTGGCTGGCTCCTCTTCCAGCTGAGTCCCTGTGGCTAGCTCCTCTTCCAGCTGATCCTCTTTGCTGCTGATCTATTATATGCCCCC EMBV3_13214 CAGCACCCTGCTTAAAAGTCTGGTCTCCCATCCCTATCCTACCTATAACTTCACCCTTAC Gene GeneID:524465|AMN1:NM_001075858:8_cdna UTR3_Alt 2 NULL GeneID:524465 5 GENE AMN1 NULL antagonist of mitotic exit network 1 homolog (S. cerevisiae) EMBV3_07492 AACACAAATGGCGTTTATTGATCTGCTTCAACACTACAGGACTCCCGGGCTGGGTGCAGG Gene BVV0102_159350 + 0 NULL GK000026.2:51123337-51127285 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152615 TCONS_00152611 TCONS_00152612 TCONS_00152613 TCONS_00152614 TCONS_00152609 TCONS_00152610 1 XLOC_092384 Coding TCONS_00152615 XLOC_092384 Coding Coding INPP5A 26:51125093-51200927 = TSS113786 2510 1 TCONS_00152615_2 387 15 0.96709875647805 0 0 2.896412368634e-16 2.88799366574462e-215 0 0 2.25873984114991e-38 0 0 6.22910620910342e-05 2.05162325080632e-07 2.77965382830308e-05 3.81907233255354e-14 0.00014111725921719 2.40484764525859e-05 0.00303112726409944 0.000643786177109763 0.00264355475536121 0 0 0 0.00127127739972325 0.0013951517296202 0.00311129003325577 1.38565827613035e-193 0 1.33993047519152e-311 9.18422368810532e-05 0.000169251039404518 0.000201645946648168 XM_866984.5 INPP5A PREDICTED: Bos taurus inositol polyphosphate-5-phosphatase, 40kDa (INPP5A), partial mRNA. 0.0 4462 100.00 0.985258964143426 XM_005252681.1 INPP5A PREDICTED: Homo sapiens inositol polyphosphate-5-phosphatase, 40kDa (INPP5A), transcript variant X1, mRNA. 0.0 1995 78.51 0.983266932270916 TCONS_00152615_2 sp|Q14642|I5P1_HUMAN I5P1_HUMAN Type I inositol 1,4,5-trisphosphate 5-phosphatase; 0.0 726 95.01 0.930232558139535 1 coding 1 1 1 1 0.0278757155247924 0.797975186431823 0.000898892326500034 0.991337183696182 ATGCGTGCACCCACACCCCCGCGGGGCCACAGCAGTGTCGTGCACGTTCACAGGCCGCACTTCCTGGCCCTGCACTGCCAGGAGTTCGGAGGGAAGAACTATGAAGCGTCCATGTCGCACGTGGACAAGTTTGTCAAGGAGCTGCTCTCCAGCGACGCGATGAAGGAGTACAACCGGGCGCGGGTCTACCTGGATGAGAACTACAAGTCGCAGGAGCACTTCACGGCGCTAGGAAGCTTTTACTTTCTTCACGAATCCTTAAAAAACATCTACCAATTTGACTTTAAAGCCAAGAAGTACAAGAAGGTGACCGGCAAGGAGATCTACTCAGACACACTGGAGAGCACGCCCATGCTGGAGAAGGAGAAGTTCCCGCAGGACTACTTCCCCGAGTGCAAGTGGTCGAGGAAAGGCTTCCTCCGGACGCGGTGGTGCCTCGCGGACTGTGCCTTCGACTTGGTGAACATCCACCTTTTCCATGATGCTTCCAACCTGGTTGCCTGGGAGACCAGCCCCTCCGTGTACTCAGGGATCCGGCACAAGGCCCTGGGCTACGTGCTCGACAGGATCAGCGACCAGCGGTTCCAGAAGGCGTCCTACTTTGTCTTCGGCGATTTCAACTTCCGGCTGGATTCCAAGTCCGTGGTGGAGACTCTCTGCACAAAGGCCACGATGCAGACCGTGCGGGCCGCGGACACCAACGAAGTCGTGAAGCTGATATTCCGAGAGTCAGACAACGACCGGAAGGTGATGCTCCAGCTGGAGAAGAAGCTCTTTGACTACTTCAACCAGGAGGTTTTCCGGGACGACAACGGCACTGCGCTATTAGAATTTGACAAAGAGCTGTCTGTGTTTAAGGACAGACTGTATGAACTGGACATCTCGTTCCCTCCCAGCTACCCATACAGCGAGGACTGCAGCCAGGGCCGGCAGTACATGAACACCCGCTGCCCCGCCTGGTGTGACCGCGTCCTCATGTCTCCTTCGGCCAAGGAGCTCGTCCTGAGGTCGGAGAGCGAGGAGAAGGTTGTCACCTACGACCACATCGGGCCCAGCGTCTGCATGGGAGACCATAAGCCCGTGTTCCTGGCCTTCCGCATCGCGCCCGGGGCAGGGAGGCGATGCCAGCGCCTCGAGGGGACCCCCGGCGAGACCCCCCCGTAGCACGAGGGCCCACGTCCTCCGACAGCTGCGTCCAGACCCGCCCGAGCGCCACCGCTAGACGGCCGGCCCCACACTCTGCTTCAGCCCCGGACGGCGCTCCGGACAAGCCTCACATACCTCACCGTCGTGTCTGTCCATGTGGCATCAAGTAGAAACATTGGGTTTTTTTTTAACAAGTCACAGTCCTGTTGCCAAAACTCTAATAGACAGCAAAAATCTGTATTTTAGACGTCACGGTTTTCGATTTTTAATCATTGTCAGCGTGGAGGAGCTTCTCGGGAGCAGAAACCCGGCGGGGCTCAGAGTCGCCCTGCGGCGGGGGCTGAGCAGGCCGGCCGGGCTCCACGACTGGGGGCACGTGGCCCCCGCTTTCGCTTCTGGAGGCCCCTCCCTGTCAGTCACTCTACTGCCACGTTACGTGGTTTTTGAATCACACTGCAGCTGCTTCCCATTTTTATATATATAAATATATATAAATATATACTTTTTAAAAATAATTTATAAACCTTACCAAAACTTACGCTAAATATACTTTCCAGTATGAATGCTTGAGTGTCATATCAGCAGTAGAACCGAGTCTAGGAGCTGGTCCCCCGCACGTCCACACGCAGAGCTGTCAAACCAGGACTGCGCCCGGTGGCGCCGTGGGGCTCGGATGGCCCGCGGCTCTCACGTGAGCAGTCAGACTCCTAGGCTTCCTGCTGTGTAATATTAAGAACTGAATGTGAAGTTTATAGCTAGCTCGGGTGTACCTTTCAAGAATTTTGTAAACCGTTTTGTCCGTCTTTTGTTACTGTTCTATGGTGCCAAGTATTCTACATAAAACAATAATATCATGGGAGAAATAAAAATAGCCTAGTCTGCTTCTGATAGAAACCGCTTTTAACATGGGCTGTATATAAACTATTAAGAGAAACAAACTGTCCTCGTCCCCAGTTGCCGCGCCTCCCACGGCCCGTCGTGACCCTGCCGCACGTCTCTGTCCCCGACACCTGGCGCAGCGGTCAGAGGTGGCGCCCGGCCCGAGGATGAAACACAAATGGCGTTTATTGATCTGCTTCAACACTACAGGACTCCCGGGCTGGGTGCAGGCGCCGGGGGGAAGCTTGGCTTAGGTGAATCACTACCCTCGCAAGCCGTGTGGCATCCACCGGCCGAGTCTGCATCCTTGACAGAATGATTGGGGTGTGTGTCAAGCTGTGGTCACTCCGTCCACGTGCCACACGGCCGTTCCGGCCCACAGTGATTTCTGTGTAGCAGGGTTTCAGCTGTTGCTCACTCTGGAGGCCTTTGGAAATGACCGCTCCGGTCCCTAAGCAATAAAATTGATCTTGGTGAAAACACCA EMBV3_19257 AGTGAATCTGCTTGAGAAACACGACCCGTGGCCAGCCTATGTCACGTACACCTCCCCAAT Gene GeneID:516149|CDRT4:NM_001046220:42_cdna Constitutive 0 NULL GeneID:516149 19 GENE CDRT4 MGC134373 CMT1A duplicated region transcript 4 EMBV3_15572 GGTGGCTCCCGGACTGGGCTGTTAAGTCAGGAATCCCAGATGGTACTTATTACCTGTTAA Gene BVT0102_349214 + 1 EMBV3_15381 GK000007.2:4851459-4859845 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06166 GTGATGCTTGTCAAAGCACTTCGACTGGCTGCATAGCATACTTTGGGGTAAATTTGAAGG Gene GeneID:519974|NSMCE2:NM_001075797:38_cdna Constitutive 3 NULL GeneID:519974 14 GENE NSMCE2 NULL non-SMC element 2, MMS21 homolog (S. cerevisiae) EMBV3_17009 CAACCACCGCTCCAAACAAAGACTAGGAAGCACTTAGCAAGCATGATATGCACCAATTCC Gene BVT0101_065967 - 1 EMBV3_11036 GK000018.2:60553042-60577951 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18266 TAACCAGGGGCGGCATCACTGAAGGAGGGAGATTTTGCCTGGAGTCTATGTACAGATTTC Gene BVT0102_166791 - 0 NULL GK000003.2:104556412-104603561 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42658 CTCTATCTTAATAATTTATACAGGCAGCAGCACACATCAGCACAAAATCAACCAATTAGC Gene BVT0102_044591 + 1 EMBV3_11556 GK000010.2:86661343-86669627 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022846 1 XLOC_013516 NonCoding TCONS_00022846 XLOC_013516 NonCoding NonCoding - 10:86667143-86667951 - TSS16736 808 0.242574257425743 1 0 0 0 0 0 6.72140496254181e-05 0 0 0 0 0 0 3.98281394517574e-05 0 0 0 0 0.00410947984322619 0 0 0 0 0 0 0 0 0 0 0 0 3.72045501640372e-05 XR_229067.1 LOC101904857 PREDICTED: Bos taurus uncharacterized LOC101904857 (LOC101904857), 9e-07 59.0 92.50 0.0482673267326733 XM_005267531.1 MLH3 PREDICTED: Homo sapiens mutL homolog 3 (E. coli) (MLH3), transcript 1e-36 158 72.19 0.353960396039604 0 noncoding 0 0 0 0 -0.346153166212243 0.262406400580469 -0.031889660048453 0.560556433138221 TGAAGCGACTTAGCAGCAGCAGCAGCAGGGGACTTTGTAAGGATGAGAGATCACGTATACAAAGCGTTTGGTATATAGTGAGCCCTCAGGAAACGGTAGCCAGCATTGTTCTTGGAGCCGGAAAACATGGATGCCATGCTCTGCTTTACTTATTAGCTGTGTGATGTTAGACAATATTTTTCAGCCTTGGTTTCCCACTTTGTAGAATGGAGAGAATAATTACCACCTTATTTCACGGGTTGCCAAGAATTCAAGTAAGTTACACAAATATAATTTGTAAACCTTAAAACACCATATAGGAAATAATGATTACCGTGCTGTTTGAAAATTAAATGTAGGTCTGCTCTTATGGCACCTGATTTAAAAAAACTTAACAGAATGCTAACAGGCAATAAAAGTAATGATATTTTTTGCTAATTGGTTGATTTTGTGCTGATGTGTGCTGCTGCCTGTATAAATTATTAAGATAGAGAACACTTTGTATTATATGTGTGTTTAATTGAATTCTGAAACTTCAGTGGAATTATAAAACCTTGGCTGTTTTAGGTAAATTTTGGAAATAACAAATTCATTTTCTTTCTTATTACCTGAATGTGATAGGATAAAAACAGTAAGGATAACATGTATATAGTGACTACATAACCAGTGTTTTTACCCTTTTGTTATGATTGCTGCTATGTGAAATTAAAGATACTAGATTGATGTAGCTATGTAATCAGCATTTTGACTCTTTGTTATAAATCATTTCTGCTGTGTAAAGATAAAGATGGGTAGATTAATAAAAAATTGTTTTGAGAAAGAATAATTA TCONS_00018297 TCONS_00018298 TCONS_00018299 TCONS_00018300 TCONS_00018301 TCONS_00018302 TCONS_00018303 TCONS_00018304 . 3' 1125 TCONS_00018297 TCONS_00018298 TCONS_00018299 TCONS_00018300 TCONS_00018301 TCONS_00018302 TCONS_00018303 TCONS_00018304 . 3' 1932 EMBV3_09899 CGGAGCCCGGTCCTGTTCGCCGGATTGCAACGCCACCTTCTTTATATAACTTCGTTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05405 CCGATCCACTGAAGGAAAAAGAGAAACAAGTGATGATCTGGGATGACCTGAAGAAGAAAA Variant GeneID:506232|WDR45L:NM_001075247:54_cdna 204^305 1 EMBV3_09080 GeneID:506232 19 GENE WDR45L MGC139599 WDR45-like EMBV3_43529 ACACCTTCAAGGGCGACTACAGCACCAAGAAGCATGTGTACGGCAACGGCTACAGCAAGG Gene GeneID:533492|PVRL1:XM_002693028:251_cdna Constitutive 0 NULL GeneID:533492 15 GENE PVRL1 HVEC prr1 poliovirus receptor-related 1 (herpesvirus entry mediator C) EMBV3_27129 GCTGGTGAGAAGTTGTTGTATAACACTGGGAACCTAGCCTGGTGCTCTGTGATGACCTAG Gene GeneID:100125833|RERGL:NM_001105472:2_cdna UTR3_Alt 1 NULL GeneID:100125833 5 GENE RERGL MGC154954 RERG/RAS-like EMBV3_30703 TGGCTCCCAGGCCTCTCTCACCAGATAGGAGCGTGGAAAACTAGTCTAAAATACGCCTGA Gene GeneID:514377|NAT9:NM_001103246:401_cdna Constitutive 0 NULL GeneID:514377 19 GENE NAT9 MGC159857 N-acetyltransferase 9 (GCN5-related, putative) EMBV3_15366 TATTTCCCGCCTGGGGATGGCGACCTACACCTGCGGTGGTTTGAACGGCAGGCGAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39495 AAAACTTCTCAGTAGGGGAACGTCAGCTGCTTTGTATGGCCCGAGCGCTTCTCCGTGATT Gene GeneID:528068|ABCC11:XM_002694875:871_cdna Constitutive 0 NULL GeneID:528068 18 GENE ABCC11 NULL ATP-binding cassette, sub-family C (CFTR/MRP), member 11 EMBV3_05061 ACCCACGGCTCTGTGGACTGCTGGTATTGGTGTCCTGGATGATGAGTGCTATGTATTCCT Gene GeneID:516132|LOC516132:XM_002688647:18_cdna Constitutive 0 NULL GeneID:516132 7 GENE LOC516132 NULL similar to Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92) EMBV3_35314 TCTTGGACTTCGTGGAGCAGAAATGTGAAGGTTGAAAAGCTGTTAGAAACTTACCTTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17010 GGAGAACATGGATGCTTGCCAACACGGTATTATACTTTTTCATCTTTATCCACCTGATAG Gene BVV0102_291651 + 0 NULL GK000002.2:61915815-61919637 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105416 TCONS_00105419 TCONS_00102512 TCONS_00102516 TCONS_00102511 TCONS_00105417 TCONS_00102510 TCONS_00105418 TCONS_00102514 2 XLOC_062561 XLOC_061884 Coding TCONS_00102512 XLOC_061884 Coding Coding LCT 2:61877657-61919551 j TSS76311 8989 1 TCONS_00102512_11 1674 0.12793414172878 18 0.785859212756308 3.55100709896123e-05 8.12263682214748e-05 5.05637889355415e-09 0.000557447539453792 0.000126803054344854 3.20320896784335e-05 0.000105163461326536 0.000211800072060677 2.8402794240045e-05 3.79323890735002e-05 1.32712304661239e-06 3.07187445783387e-12 1.68323539067077e-11 1.5096514302867e-10 2.64530649893483e-07 4.71562295830204e-203 2.03646468490032e-192 1.11955931924796e-212 9.08961351896049e-05 1.46679214417084e-08 5.07682942730977e-05 1.34239685345662e-08 2.11734365798477e-68 2.34645378422285e-112 0.000535958648105746 2.61359648456034e-05 0.000332848484594281 2.6693182502147e-09 3.95451926985456e-17 1.17067834941218e-13 NM_001205787.1 LCT Bos taurus lactase (LCT), mRNA. 0.0 5658 99.90 0.349760818778507 NM_002299.2 LCT Homo sapiens lactase (LCT), mRNA. 0.0 3800 84.07 0.38891979085549 TCONS_00102512_11 sp|P09848|LPH_HUMAN LPH_HUMAN Lactase-phlorizin hydrolase; 0.0 2937 83.63 0.998805256869773 0 coding 0 0 0 0 0.452822485707978 0.174399086816113 0.0156219917930459 0.750179650030046 GGAACTGAGACGCAGCTCTCTCCATCTGCCTTTTACGTTGTGTGGGGTTAGGGAAAGGAACTGTTTTGATTCTTGCAAAAGATTTTACAAGTGTCCTGCACGTCACTGTTCTGATTTATATGAAACAGTCTCTAAAGGGACATTTCTTTAAAAGCTACCTTGTTTTCTAAAGTCTTTCAGCTTGAGTAAAATCATGTGGAAAACTCTCTGTGGTCCTGCGAGCTGAGATGCTCTCCAAGCTCCTGCTAGAACCATCTATGTCTACACTTGTCAAGGATGCAGTTGACTTCATCTCTCTTGATTTATCTTATGAATGCCACAGTGAGGCAGATTTACCACAGACGTTGAGTGAACTGCAGACCACTGAACCAAAAGTGAAAGTTTTCGTCTTCAGCCTGAAACTCCAGAACTGCCTCTCCACCAGGAACAACGTAGCCCATCTGCTCTTCAGCCTGCTCAAAGCCATAAATGAAGACCAAATGCTCGTCATTGGGTTTGATATTAGTACATTCCTGAGCTGTTCATCGAGTTCCAAGAAAAGCTGGTCTTGTTCTCTGAGTGACAGCCTGACCCTCCAGACTGCCCCGCAGCTGGGCCCAGACACAGCAGTATACGCCTGGTCGCCCCGCTCAGCCTATCAGAGGGTCTGGGAAGCGTTTGCCAACCAGTCCAAGGCAGAACGGGATGCTTTCCTGCAGGATGTTTTTCCTGAAGGCTTCCTCTGGGGTGTCTCCACGGGAGCTTTTAACGTGGAAGGAGGCTGGGCCGAGGATGGAAGAGGGCCGAGCATCTGGGACAGAGTTGGGCACCAGAACACCAACAAGGGCCAAGCAACGCCAGAGGTGGCCAGCGACAGTTACCACAAGGCAGACACTGACGTTGCCCTGCTCCGTGGCCTCCAGGCCCAGGTCTACAAGTTCTCCATCTCCTGGTCCCGCATCTTCCCCACTGGGCAGGGGCGTAACCCCAACCCCCGGGGTGTTGCCTACTACAACAAACTGATTGACAGCCTGCTGGACTCGCACATCGAGCCCATGGCCACCCTGTTCCACTGGGACCTGCCCCAGGCCCTGCAGGATCGCGGTGGGTGGCAGAGTGAAGATGTGGTGGACGCCTTCCTGGACTATGCAGCCTTCTGCTTCTCCACGTTTGGGGACCGTGTGAAGCTATGGGTGACCTTCCACGAGCCGTGGGTGATGAGCTACGCGGGCTACGGCACCGGCCAGCACGCACCGGGCATCTCCGACCCAGGGGTGGCCTCTTTTAAGGTGGCCCACATGGTCCTCAAGGCGCACGCCAGGGCTTGGCACCACTACAACAGCCACCACCGCCCACAGCAGCAGGGGCGTGTGGGCATCGTGCTGAACTCAGACTGGGCAGAACCCCTGTCCCCAGAGAGGCCTGAGGACCTGAGAGCCGCCGAACGCTTCCTGCACTTCATGCTGGGCTGGTTTGCACACCCCATCTTTGTGGATGGGGACTACCCGGCTGCCCTGAGGGCCCAGATTCAACAGATGAACAAGCAGTGCCCCAGTCCTGTGGCCCAGCTCCCTGAGTTCACCGAGGCAGAGAAACAGCTCTTGAAAGGCTCTGCTGATTTTCTGGGTCTGTCCCATTACACTTCCCGCCTCATCAGCAAGGCCCGAGGAGATACCTGCATCCCCAGCTATGATACCATCGGAGGCTTCTCCCAGCATGTGGACCCCACATGGCCCCAGACCGCATCCCCTTGGATTCGTGTGGTGCCCTGGGGCATAAGGAGGCTGTTGAACTTTGTATCCTTGGAATACACAAAAGGCAAAGTTCCAATCTACCTAGCTGGGAACGGCATGCCCATAGGGGAGAGTGAAGACCTCATCGATGATTCCCTGAGAGTCGACTATTTCAACCAGTATATCAATGAGGTGCTCAAGGCTATCAAAGAAGACTCGGTGGTTGTTCAGTCTTACATCGCTCGCTCCTTCATTGATGGCTTTGAAGGCCCTTCTGGGTATAGCCAGAGGTTTGGGCTGTACCATGTCAACTTCGATGACAGCAGCAGGCCAAGGACTGCCAGGAAATCTGCCTATTTTTTCACCAGCATGATCGAAAAAAATGGTTTCCTCAACAAGGCAAAAGTGGTCTGGGAGAAGTTCTCCAACCAACCCAAGTTTGAGAGAGATCTGTTCTACCACGGCACATTCCGCGATGACTTTCTGTGGGGCGTGTCCTCGTCAGCCTATCAGATTGAAGGAGCTTGGGACGCTGACGGCAAAGGCCCCAGCATCTGGGACAACTTTACCCACACACCAGGGAGCAACGTGAAAGACAATGCCACTGGAGACGTGGCCTGTGACAGCTATAACCACCTGGATGCCGACCTGAACATGCTCCAAGCATTGAAGGTGAAGGCTTATCGCTTCTCCATCTCCTGGTCTCGGATTTTCCCAACTGGGAGAAACACTTCTGTCAACGCACATGGTGTGGATTATTACAACAAGCTGATCAATGGCTTGGTGGAAAACAACATCTCTCCCATGGTGACCCTGTTCCACTGGGACCTGCCCCAGGCCCTGCAGGACATCGGAGGCTGGGAGAATCCTTTACTGGTTGACTTGTTCAACAGCTATGCAGACTTCTGCTTCCAGACCTTTGGTGACAGAGTCAAGTTCTGGATGACTTTTAATGAGCCCACGTACCAGGCCTGGTTGGGATATGGCTCAGGGGAATTTCCCCCAAATGTGAATGACTCAGGCAGTGGACCTTACCGGATTGGCCATGCAATCATCAAAGCTCATGCCAGAGTCTATCACACGTACGACGAGAAGTACAGGCAAGAGCAGAAGGGGGTCATCTCCTTGAGCCTCAGTTCCCACTGGGCAGAGCCCCAGTCGCTGGTCCCCAGGGACGTGGAGGCAGCTGACCGGATGCTGCAGTTCTCCTTGGGTTGGTTTGCCCACCCCATCTTCCGAAACGGAGACTACCCCGATGCCATGAAGTGGAAGGTGGGGAACAGGAGTGAACTGCAGCACTTGGCCACCTCCCGCCTGCCCAGCTTCACGGAGGAGGAGAAGCAGTACATCGCAGCTACCGCCGACGTGTTCTGCCTCAACACTTACTCCTCCAGGATTGTGCAACACACGACACCCAGGTTAAACCCACCCTCCTACACAAGTGACCAGGAGCTGCTGGAGTGGGAGGACACTTCCTGGCCTGCCACAGCCATGAACAGGGCTGCCGCCTGGGGGATGCGGAGACTGCTCAACTGGATCAAGGAAGAGTATGGGGACATCCCCGTTTACATCACTGAGAACGGAGTGGGGCTGACAGACCCCAAACTGGAAGACACCGACAGGATATTTTACCACAAAACCTATATCAATGAAGCTTTGAAAGCCTACAGACTTGATGGTGTCAACCTTCGAGGATATGCTGCCTGGTCCCTGATGGACAACTTTGAGTGGCTGAATGGCTACACGGTCAAGTTTGGACTGTACCATGTTGATTTTGATGACGTGAACAAGTCTCGCACAGCAAGAGCCTCAGCCAGGTACTACACAGAGGTCATCACCAACAATGGCATGCCGCTGTCCAAAGAGGATGAGTTCCTATACGGACAGTTCCCCAAGGACTTCATCTGGAGTGCAGCTACTGCCTCATATCAGATCGAAGGTGCATGGAGAGCAGACGGCAAAGGACTCAGTATCTGGGACACGTTTTCTCACACACCCCTGAAGGTTGAGAACAATGACACAGGAGACGTGGCCTGTGACAGTTACCACAAGATCGCCGAGGACCTGGCCGCCCTGCAGACCCTGGGCGTGACCCACTATCGCTTTTCCATCTCTTGGACTCGCATCCTCCCCGACGGGACCAACAGGTACGTCAACGAGGCGGGCCTGGACTACTACGTGCGGCTCATCGACACGCTGCTGGCCGCCAACATCCAGCCCCAGGTGACTATTTACCACTGGGACCTGCCCCAGGCACTCCAGGATGTTGGGGGCTGGGAGAATGAGACAATTGTACAGCGGTTTAAGGAGTATGCAGAGGTGCTGTTCCAGAGGCTAGGGGACAAGGTGAAGTTTTGGATCACACTGAATGAGCCCTACGTCGTTGCTTACCAGGGCTACGGCTACGGGACGGCAGCTCCAGGGATCTCCTTTAGGCCCGGCACTGCCCCCTACATTGTTGGCCACAACCTGATAAAGGCTCACGCTGAGGCCTGGCATCTGTACAATGACGTGTACCGTGCCCGGCAAGGTGGCGTCATCTCCATCACCATCAGCAGCGACTGGGCTGAGCCCAGAGACCCCTCCAACCAGGAGGATGTGGAGGCAGCCAAGAGATACGTTCAGTTCATGGGAGGCTGGTTCGCACATCCGATATTCAAGAATGGGGATTACCCTGAGGTGATGAAGACGCGGATCCGTGACAGGAGCTTAGCGGAAGGCCTCAACAAGTCTCGGCTCCCTGAGTTCACGGAGAGTGAGAAGAGGAGGATCAACGGCACCTACGACTTTTTTGGGTTCAATCACTACACCACTGTCCTGGCCTACAATTTAAACTATGCCTCTTGGATCTCTTCCTTCGATGCAGACAGGGGAGTGGCCTCCATCACAGACCGCTCCTGGCCAGACTCCGGCTCCTTCTGGCTGAAGATGACCCCTTTTGGCTTCAGGAGGATCCTGAACTGGTTGAAGGAGGAATACAACAACCCCCCGATCTATGTCACAGAGAACGGAGTCTCCCATCGGGGAGAAGCAAACCTCAATGACACTGCAAGGATCTACTACCTCCGCAGCTACATCAACGAGGCGCTCAAAGCTATGCAGGATAAGGTGGACCTTCGAGGATACACGGTTTGGACTCTGATGGACAACTTCGAGTGGGCCACCGGCTTCTCAGATAAGTTTGGTTTGCATTTTGTGAACTATACTGACCCTGCTCTGCCAAGGATCCCCAGAGAGTCAGCCAAGGTCTACGCCTCCATAATCCGGTGCAGTGGCTTCCCCGACCCTGCTGCAGGGCCACATCCTTGTCTTCAGCAAGAAGATGCTGAGCCCACCGCCAGCCCCGTGAGACAGAACATTCAGTTCCTGGGCCTCAGGCTGAGTACGACGGAAGCCCAGACAGCGCTTAATGTGCTCTTTGCTTTCATGCTTCTTGGAGTCTGTTGTGTTGCACTTCTGTCCTACAAGTATTTTAAGCGTTCCAAGCAAAAGCACACACAACCAGGTGAACAGGAATTGAGCCACAGGTCTTCATTCTGACCCAGAAGTTACCACCTCCTCCAGTTCTCCTCCTAGTTTCTCTGCAAGTCTTTGCCACCCCCAGGACCACTGAGGATCTAATACTCTGTCTATAACAGACTTTATAAAAATCTCTGCACTCTTAAGACACTAATCTTGAAGGATTTCAAGTCCCTGATTAAAATGGAAGTATCCCCACCTTGCCCCCATATCAGGAATTCATCTGGGCATTAGAAGACCCTGCGAGTGGCTCCTGTGGAAATACGCAGTTACTGAACTCAACTACTAGGTTCTGTGAGTCATTTAACTGAACTGTTTTAATTTTCAGAGATTTTTAAAGGTGGAAACATTAGTAAAAACCATAGCAATCCTTTTCATGAAAAGATAACCGCTAGGTCATCTCCTGCTTTCTTTAAGTTCCCTCCTAGCCTCTCTTACCTTCTGTTTCTCAGAACCTGAAAAAGATGCTCTTAATGGTGTCCTGTCTCCTACGGGTGCTTCTCCTCAGAAGACGGGTTCCATAGCAGTTATGAACATCCCCGTTCACAGCTTCATCACATTAATCCTCTGCTATTGGCTTCCGGAGGCCAGAGGACCATGTCTCAGTGTCTCCGGCAAGTACATTTTTGGAGACAGGACAGAGGGAAGCACACCCACTACATCTGTATGTTTATTCACAAAACATTCAGAGAAGTGGGTGAGTCTATCACTTCCACTCAAATGTGCTCATGAGACAATCACAGAATGGAAGACTCTAACTTATTTAACCTATATATTCTTTCTAGATATCTAGGAGATATTCTTTTTTAAAAATAGTTTTCAATTGGTTTTAAAAGGTTGATCATGCTCAAGATGTTGCTTCTGGTAAGCGTTCCTACCTGAATTGTATCTATAGAAAATTCCTACCACAGTGTCCCACTGCTGTGGGCCCCAACCTGGCAGTCAAGATTGTGGGGCACAGGCATTTTCTTCCACCAAAAGACAGGAAAAGTTGATCAGATGGGGTGAAGATGGTTCTAAAACTGCTATAAGAGATTTTTATAAGCTGTCAATTTTATGTAAATTAATCTTCAAAAGTCAGTATACCTTTTCTGCAGGGGTAGGGCAGGAAATGGAAAAAAATAATATAAAGTTGCACATAAAACTCACTTGTAAAAAGAGCCAGGATAAATCTGGGGGGGGCGGGGTTGGAGAAAAAAATATAAAGCTAGTTACTGTTTTGAAACGGAGTGAACAGAAAGATCAACAAAGGAAGACAGAGCCTAGACACAGACCCAGCTGCATACCAGGGACAGGGTGCACGCCAGAGGTGACCTGCCAAATGGCGGGGCGGTAGAAGGGGCGATGATGGACCAGTCCTTATATAAATGGAGGTGGGCCACAGGCCAGTTCTAAGGATGTTAGTCACAGGTGCGGGAAGGGAGCCACATTCCTTACCAGGATATAAGATTTAAATGTAGAAAAATGAAACCCATGAGAATGTCAGAAACCCATGAGAGTGCTAGGACAGACAGGTGAGGTTTTTTAAATTACTTTTTGAAGTGGGAAAAGTATTTTATATTCAAGACTTACGACCTGGAGGTCATAAATAAAAACACTGATAAACAGGACCACATAGAAATTATGGCAAGAAATTACCATCAACATACTCATCAAAAGATGAACAGGGAGAAAATATTTATAGCATATGCCAGACAAACAGCTAACTTTCTTAATATACATGAAATCTGTTGTAAATCAGTAAGAGAGATAAACACAAATGAAAATTGGCAAAGAAAACACAGGCAGTTCTCAGAAAATAAAATAACCAATAACATTAAAAGATGTTCACCTTCATTCACAATCAACACGATGCATATAAAATGCACACAATTTTTCATCTATCAGGTGGATAAAGATGAAAAAGTATAATACCGTGTTGGCAAGCATCCATGTTCTCCTACCTGTCAGTAGGGCTGTAAATTCACAGAGCCTTTAGAGGAGGCAATTTGGCAGCATTTTTTATAATCCAAACTGCAAATACCCTTTGACTCAGTGACTTACAGGTGTATTTCCCACAGCTAAGAAACTTCCCAAAGCTATGTTCACTGTAGTGACATTTGTAACAGAAAAACAGAAACAAGCACATAAACTGTAATAACCAATGAAAGCAGTAAGAGAATAGGTAGTTTACCAAGTAAAATGCTCTGCAGGCACTAGTAAGAATGAGGTAGCTATGTGTTAATGGGGAAAGATCTTCAAGACCGTGTATGTTAAAAGGCAAGATGCAGAGTAGTATACATATAATACGATCCCATTTATTTAAAAAATAAAGATTACATATTTGCCTATGTACACGTAAAAATTTTCTGAAGACTACAAGAGAAACTTGAGAGAGATTACTTCTGGAGACTAGAAGTCTTCTAGATTAGAAGACTAATCCACAAGACTAGATTAGTGTGTGATGCCAAGAGGAAGACATCATTTTATAGCCTTCCATACTGTTTTGAATTTACCATTATACTTTTTAAAATATGAAATTGAGGCAGGATCCTCGTACTCAAAGATTGTGAATCATTCTTTTATGTATGTTTCTCTAAGATCTGCATTTGATTTTTTTCAAGGGAAAATTGATTTTTTATTCACATATTACTGTATTTTTCAAGATGAGAGACCTTTACTTAAATGAGATGCTTGCTGGAGATGTATCTATTTCAAACTCTTTCCTTAAATTATGAAAGTAATTTCATTACAGAAAACTGAGAAGACATATAAGGATGAAAATGAACTAAAATCATAATATAAATCACTCTTACTGCTGTTGGTTTTTCTTTCTTTACATTATGCTAAATATACTATATATGATGTGTTTATAAAGTTGAGATCATACTGTACCTGCAGCTCTGTATCCTGCTTTTTCCCCTGAACACATAACAAACAGTCAATAAATATGTTAAATCAAATTGCTGAATTAGTATTGTCCCATTTTTCCTTAGCAAAAGTTAATTCTGCAGAAGGCATGTAGTTGGGTTTCTGAGGTTAAATAAATAAAACTTAACAGGTTTATACCTAAATTTTGCCTGTATTTATAATCATTCCTTAGAAAAACTTTTTAGATCAAAAAGCATGAAATTTTTACGGCTTCTACTAATGTTTTTTCAGAAAAATTATACTAGTTTTCACTCCTACCAACACCACCCCTGGTCTGTTTCCTTGCCAACACTATTACCATTGTTACTTCACAGGTGAAACAAAATTTGCTCTGAGAAAACTTCCTCCTCTCATTACAAAATAAACTCAGAGTCCTTCTACAACGTTAAGTATCTTCCAATCTAAACACAAAAGGTTAGAGAGGAACAGTCAAAATTACCCCCTTTTCCAGACATTCTTAGTGTCTTCACCGACATAAACATATCACAGTATGTAAATCAGATTAAGAATCTAAAATTCTTAATAATAACCAAATGAGCAAGAGGCAAATCTTAACTCCCTACTTCATGCCCAACAGTACAGGTTCTTTATTTCTTTGAAGAGTGACTATCATTGAGGGCGAAACTCCAGTATAAAGGTGAGAACCAGCTGTAGACCGGCAGTTGTTTTGCATCTAATGAGAACAAAGGCCACTACATTATGCAAACAAAATGATGCCTCCCTGCTTAGGAGAGACACTAACATAGCATCAGTGTGTGTCAGAAAACTTCCTCCTGCAGTGATATTTATGGTAAAGTGGTCCCTCCTTTCTTGGGAAAGCTCCAGGCAGTACAGATGGGTGGGGGGAT EMBV3_31714 AGGGGTTCCTGCCTATTGACTGTTCCCCTGACCTTGCTAGTGACAACTTGGACCCTTGAT Gene GeneID:513787|SLC27A1:NM_001033625:68_cdna Constitutive 0 NULL GeneID:513787 7 GENE SLC27A1 FATP-1 solute carrier family 27 (fatty acid transporter), member 1 EMBV3_21856 GTCCGACGTGGACCAGCGCTGCCTGGACAGGTGGACATGCCAGCCAACAACAAGTGCCTG Variant GeneID:514636|C25H16ORF13:NM_001038106:165_cdna 379^748 7 EMBV3_42652 GeneID:514636 25 GENE C25H16ORF13 MGC134534 chromosome 16 open reading frame 13 ortholog EMBV3_26956 GGGCAGCCTGATGCAGAAGAAAAAGACTTGCCTGTGGAACCAGATGACACGAGTTGTATC Gene BVT0102_116227 + 1 EMBV3_25484 GK000008.2:100682000-100848106 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37240 GGGTAAGAATTGAATGAGGTACCTGTAATTATCCTACCTTAATTTAAAAGTGTATACTAT Gene GeneID:508284|ACBD7:NM_001113297:82_cdna Constitutive 1 NULL GeneID:508284 13 GENE ACBD7 MGC128293 acyl-Coenzyme A binding domain containing 7 EMBV3_11907 AATCAGGTTGAGAAGCACTGGTGATGGAACTGAATTGGCTGGGAAGGGTGACCTCGCTGA Gene BVV0102_056253 + 0 NULL GK000003.2:23703530-23794922 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36086 ACTTGCTCATCAGCACCTACCCCAAGTCGGGTGTTGAGCTTCTGAAAGATACACCAGCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23907 ACAAACCTTTGGTCTCTACCTGAGAAGCCATGTCCCTTGTGCTGTCTCTCGCCTGTCCAA Gene GeneID:540685|RAB1B:NM_001076233:92_cdna Constitutive 0 NULL GeneID:540685 29 GENE RAB1B MGC128300 RAB1B, member RAS oncogene family EMBV3_26490 GATTGCAGAGGCAGTGAAGAAGGTGATTAAAGTTGGCAAGGTACGGACTCGAGACATGGG Gene GeneID:613338|IDH3B:NM_001145872:1264_cdna Constitutive 0 NULL GeneID:613338 13 GENE IDH3B IDH1 IDH3 isocitrate dehydrogenase 3 (NAD+) beta EMBV3_28810 CAAGCAGATCACATCCATTCTTCAGCAAAGCTGTCTTGTCAGTGCCTGGGCCTGGGTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34818 AGAGTCTGTGTTCTCTTGGTCGGGGTATCCTACCTGCGTGGGTGTGTCAATGCTTGTACA Gene GeneID:783281|LOC783281:XM_002693073:397_cdna Constitutive 0 NULL GeneID:783281 15 GENE LOC783281 NULL similar to olfactory receptor MOR204-11 EMBV3_15134 GAAAGACATCCCTCCTGTCATTCACGCAGTTCCTAGAATCCTCACCAGTCAAGTCCAAGG Gene GeneID:540089|C28H10orf104:NM_001014960:386_cdna Constitutive 0 NULL GeneID:540089 28 GENE C28H10orf104 C10orf104 MGC138954 chromosome 10 open reading frame 104 ortholog EMBV3_26547 GGATTGTTCCTTTACTTCCATAATTCTGCTGATGTGTGAGTATGGCGCTGCCTGGCTCCC Gene GeneID:539967|SPTY2D1:XM_002699086:67_cdna Constitutive 0 NULL GeneID:539967 29 GENE SPTY2D1 NULL SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) EMBV3_18876 CTTTTTCAACCTTAGGCAATGCTCTGGGAGGCTTTGGAGGTAAACTGGGGAACTCCTAGG Gene BVV0102_102260 + 0 NULL GK000030.2:94080162-94102167 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130705 1 XLOC_079413 NonCoding TCONS_00130705 XLOC_079413 NonCoding NonCoding - 22:29958647-29959420 - TSS97572 773 0.0892626131953428 1 0 0 0 0 0 0 0 0 0 0 6.52037871167138e-05 2.27267364450538e-05 4.37482950199237e-05 0 0.000188646701887841 8.85046761096227e-05 0.00092304185123667 0.000373534286902564 0.000865462280539859 0 0 0 0.000408083224128298 0.000555375263663663 0.00051098630088296 0 0 0 3.83130739975831e-05 6.04992635057318e-05 0.000232486342903893 XM_005226836.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X1, mRNA. 2e-27 127 79.25 0.201811125485123 0 noncoding TGTATATTGTGTATTTTTTAAAAGCTCCTTTCTTTAAAAATAAAACTTTTTAATCTTTTTCAACCTTAGGCAATGCTCTGGGAGGCTTTGGATGTAAACTGGGGAATTCCTAGGCCCTGAGAGGTGCAAGCGGAGGTGGGGTAGTCGCCTTAAATCAGAAATTGTTGGACAAATTTTTAAAGGTTTGTGCAGAGGGAGTAACACTCTTTAAATACAAATCAATGTTAAAAAACTTTAACAAGCAGGCTTCAAAGGTCAGACTGGAAGGCCTTTCAGCCTTTCACAGCCTATGTCTCTGAGTTGATTCAGTGTCCGTTCAGTCTGCACTGCCCCGGTAGGGGGAGAGGGAGCTGTTGACTAGAACCCCCAATTTTTTTTTTTCAGTTTTTTAGAGTGTCTTTTTATTGTGGTAAAAGTCACGTAATATTGAACATCCTATTTTAACCATATTTAACTGTACATTTCAGTTAGAGCCCCAAAGTTTTGACAACAAATTACTAAACCCCAAATTTGCTCAAACTTTTAATAAATGTATAATAATATTTAATGAAAGTAAATAATAGCATTCAAAATATGAAGTGCACTGCAGGGTAGTTGTCTTTTTCAGACTCTCTAACTTCAGGAGCTTGTCAGTTGATATATCATGACGATTTTAATTGGGGCAAACATTCAAAGTTTAAATAAAGAACCTCACTAGAGGTCTGATTTTGGAAAAAAACAGAAAAATTACAAACATACATTTAGGAAGTAGGTAGATAATAATACAAAAGAAT TCONS_00128409 . 3' 28288 TCONS_00128409 . 3' 29060 EMBV3_39486 CTTGGATTTTCTTTCTATGTAGAACTGTTCTTTTCCGCCCAGGGTAACTGCTGTCTCTGA Gene GeneID:539930|CALB1:NM_001076195:73_cdna UTR3_Alt 2 NULL GeneID:539930 14 GENE CALB1 MGC138959 calbindin 1, 28kDa EMBV3_30152 GGAAGCTTTGGTTCTTCAAAGATAAGAAGTTCTCTGGGGAGGAGGCCCTGGGAGACAATC Gene BVV0102_262654 + 0 NULL GK000001.2:83925288-83927441 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004375 TCONS_00004379 TCONS_00004385 TCONS_00004383 TCONS_00004380 TCONS_00004381 TCONS_00001404 TCONS_00004382 TCONS_00004376 TCONS_00004378 TCONS_00004384 TCONS_00004377 TCONS_00001403 2 XLOC_001029 XLOC_000352 Coding TCONS_00004381 XLOC_001029 Coding Coding YEATS2 1:83926177-84030102 j TSS2193 6972 1 TCONS_00004381_5 1298 0.0271084337349398 29 0.933191563065317 3.74909490574475e-15 3.34265362995225e-13 2.82896465539588e-13 2.89099017907246e-27 2.61078826785354e-13 3.41364096140159e-10 4.80836683811734e-15 9.19824863414008e-12 5.63172515226156e-08 9.4228338556715e-32 1.00413601392638e-38 1.95782267890224e-15 2.70062103154644e-38 4.27618253388808e-28 5.14843646448273e-15 0.00200196838312436 2.95441708065782e-42 3.12311031895208e-21 8.9825211726868e-16 1.82169527237747e-11 0.000170314037075231 0.000317099024018129 0.00111791195832793 2.24384760270747e-24 1.17141197841028e-05 0.000615378434493486 1.12614550218427e-18 4.5718630830009e-13 3.01418055125137e-23 8.39191318896836e-19 XM_005201593.1 YEATS2 PREDICTED: Bos taurus YEATS domain containing 2 (YEATS2), 0.0 9721 100.00 0.772948938611589 NM_018023.4 YEATS2 Homo sapiens YEATS domain containing 2 (YEATS2), mRNA. 0.0 3121 79.12 0.51061388410786 TCONS_00004381_5 sp|Q9ULM3|YETS2_HUMAN YETS2_HUMAN YEATS domain-containing protein 2; 0.0 2270 84.11 0.999229583975347 1 coding 0 0 0 0 -0.477756105589001 0.0085214229258882 0.0243945160149184 0.615990031494059 GCCAAACGGGCCGGGCGGGCTCCGCCGAGCCGTGTGCTTCCGCGGGCTCCGGGGTCGCTGGGGCCTCGTGGTGGGGCGGCTCTGCGGGGCTCGGCCCGCTTCCTCCCCTCCCCCGTGCCCTCTCGCGGCACCCGGCGGTGTCTGCGCTTAAGCCGGAGACCCAGAAAGAAGTGAAGAACGAATGTCATCATGTCTGGCATCAAGCGAACAATCAAAGAAACTGACCCTGATTATGAGGATGTATCTGTGGCTCTTCCGAATAAGCGGCATAAAGCAATTGAGAATTCAGCTCGAGATGCTGCTGTGCAGAAAATTGAGACTATTATCAAGGAACAATTTGCACTTGAAATGAAGAATAAGGAACATGAAATTGAGGTCATTGACCAGCGACTGATTGAGGCAAGAAGGATGATGGATAAACTTCGTGCCTGCATTGTTGCAAACTACTATGCTTCTGCAGGACTTCTGAAAGTTTCTGAGGGATCAAAGACATGTGATACAATGGTTTTTAATCATCCTGCTATCAAGAAATTTTTGGAATCACCATCTAGGTCATCATCTCCTGCCAATCAGAGATCAGAAACACCATCAGCCAATCATTCAGAAAGTGATTCTTTATCTCAACACAATGACTTCTTATCTGACAAAGACACTAACAGCAATATGGATATAGAAGAAAGACTCTCAAGCAACACGGAGCAGAGACCAAGCCGAAATACTGGAAGGGACACTTCTAGTATTGCTGGCTCCCATAAAACAGAGCAGCGGAATACTGATCTTACAGGAGATGAGACTTCACGACTTTTTGTAAAGAAAACAATAGTAGTGGGCAATGTGTCCAAGTATATACCTCCTGATAAGAGAGAAGAAAATGACCAGTCAACCCACAAGTGGATGGTATATGTCCGAGGCTCTCGTAGAGAACCCAGTATTAATCATTTTGTCAAGAAAGTTTGGTTCTTTCTTCATCCCAGCTATAAACCAAATGACCTTGTGGAAGTTAGAGAGCCTCCTTTTCACTTGACCAGAAGAGGCTGGGGTGAGTTTCCTGTCAGAGTTCAAGTTCACTTTAAGGACAGCCAGAACAAGCGGATAGATATCATACATAATCTGAAGCTGGACAGAACTTACACTGGCTTGCAGACTCTTGGAGCAGAGACGGTAGTGGATGTTGAGCTCCATCGGCATTCTCTGGGAGAAGACTCCGTTTATCCTCAGTCCTCTGAGTCAGACATCTCAGATGCCCCACCGTCCTTGCCTTTGACCATTCCAGCCCCCATGAAAGCGTCCTCACCGATAAAGCAGTCACATGAGCCAGTACCTGATACCTCTGTGGAGAAAGAAGGATTCCCAGCCAACACTGAAGCTGAGAGACACACTACATTTTATTCTTTGCCATCTTCATTGGAACGAACACCTACCAAAATGACAACATCCCAGAAGGTTACCTTTTGTTCTCATGGCAATTCAGCTTTTCAGCCAATAGCATCGAGCTGCAAAATTGTGCCACAAGGTCAGATTCCTAACCCTGAGTCACCTGGAAAATCCTTCCAGCCTATCACCATGAGCTGCAAGATTGTCTCAGGAAGTCCTACCAGCAAGCTCTCTACTGCCTCTCAGGCCTCCCAAGGAACAGGTTCCCCAATTCCTAAAATTCATGGAAGTAGTTTTGTAACATCTGCTGTCAAGCAGGAGGATTCTTTGTTTGCATCTATGCCACCTCTTTGCCCAATTGGGAGTCACCCTAAAGTTCAAAGCCCCAAACCTATAACTGGAGGACTTGGAGCTTTCACAAAAGTTGTTGGGGTGCCAGTCGGGTCTACTCTGCCTTCAACAGTGAAGCAGGCTGTGGCAATCAGTGGTGGTCAGATCCTTGTAGCCAAGGCCAGCTCATCTGTCACCAAAGCAGTTGGTCCAAAGCAAGTTGTGACCCAAGGAGTTGCCAAGGCAATTGTGAGTGGAGGTGGAGGAACCATTGTCGCTCAGCCAGTGCAGACATTAACCAAGGCTCAGGTCACTGCTGCTGGCCCTCAGAAGAGTGGATCCCAGGGTTCAGTGATGGCAACATTGCAGCTTCCAGCTACTAATTTGGCCAACTTGGCAAACTTGCCTCCTGGCACTAAACTCTACCTTACAACAAACAGCAAGAACCCTTCGGGCAAAGGAAAACTGCTGCTGATCCCTCAGGGAGCCATCCTGCGAGCTACCAACAATGCTAACCTCCAATCTGGCTCAGCTGGCAGCAGCGGCGGCGGCAGCAGTAGTGGTGGGGGAGGCGGTGGCAGCAGTGGAGCAACAGGAGGAACCGGTGGAGCCCAGAACCCTGCTGGCCCTGGAGGGATATCCCAGCATCTGACGTACACATCCTACATCCTCAAGCAAACCCCTCAGGGCACATTTTTAGTTGGCCAGCCATCACCCCAGACATCTGGGAAACAGCTGACTACGGGGTCAGTGGTCCAAGGAACACTGGGAGTCAGCACATCTTCTGCACAAGGACAGCAGACATTAAAAGTCATCTCTGGACAAAAAACCACTTTGTTTACCCAGGCAGCCCCAGGGGGACAGGCGTCTCTAATGAAAATATCTGATAGCACCTTGAAGTCTGTACCAGCCACGTCCCAGCTCTCAAAGCCTGGAACCACAATGCTGAGAGTTGCAGGAGGGGTTATCACAACTGCCACTTCCCCAGCTGTAGCCCTCTCAGCAAATGGGCCTGCACAACAGCAGTCAGAAGGAACAACTCCTGGTTCATCGTCTGCTGTGGGTTCTGTCATGAAAACTTCCGGACAGCAGCAAGTGTGTGTGAGCCAGGCCGCTGTGGGATCCTGCAAGGCTCCTGCCCCCTCTGTCATCAGCGCCACGTCCCTGGTGTCCACACCAAACCCCATCTCTGGAAAAGCCACAGTGTCAGGATTGTTAAAGATTCACTCCAGTCAATCCAATCCCCAGCAGGCTGTCCTGACGATCCCCAGCCAGCTCAAACCACTCAGTGTAAACACGTCTGGAGGTGTGCAGACGATACTGATGCCTGTGAATAAAGTGGTTCAATCGTTTTCTACCAGCAAATCACCTGCCATTCTGCCTGTGGCTGCCCCAACTCCAGTTGTCCCCAGCTCTGCTCCAGCAGCTGTTACAAAAGTGAAGACAGAACCGGAAACACCTGCACCAGGGGGCCCCTCCCAGGATGGTCAGACAGCAGTGAAAACAGAAGACAGTTCTGAGCTGGGAAACTATGTCATTAAGATAGACCATTTAGAGACCATCCAGCAACTCTTAACAGCAGTAGTGAAGAAGATCCCATTAATTACTGCAAAAAGTGAAGATGCCAGCTGTTTTTCTGCAAAATCTGTGGAGCAGTATTATGGCTGGAACATTGGGAAAAGGAGAGCTGCTGAGTGGCAAAGAGCGATGACAATGCGAAAAGTCTTACAAGAAATACTGGAGAAGAATCCAAGATTTCACCATCTGACTCCACTTAAAACCAAGCACATTGCTCACTGGTGTCGCTGCCATGGCTACACCCCACCTGACCCCGAAAGCCTGAGGAGCGATGGGGATTCGATCGAGGATGTGCTGACCCAGATTGACAGTGAGCCAGAGTGTCCATCATCTTTCTCATCCGCTGACAACCTCTGCCGGAAACTGGAGGACCTGCAGCAGTTTCAGAAGAGAGAGCCGGAGAACGAGGAGGAGGTGGACATCCTCAACGTCTCAGAGCCGTTAAAGATAAACATCAAGAAAGAACAGGAAGAGAAACAGGAAGAGATGAAACTCTACCTGCCACCAACACCGGGCTCTGAATTTATTGGCGACATCACACAGAAGATTGGGATCACCCTGCAGCCTGTGGCGCTGCATAAGAACGTGTATGCGTCGGTGGTGGAGGACATGCTTTTGAAGGCTACAGAGCAGCTGGTCAGTGACATCCTGAGACAGGCTTTGGCAGTTGGATACCAGGCAGCATCGCACAACAGGATTCCCAAAGAAATTACAGTGAGTAATATTCACCAGGCCATTTGCAACATTCCTTTTCTGGACTTCCTCACAAACAAACACATGGGGATACTGAATGAAGATCAGTGAATGGAATGAATATGCTCCCAGGAAAGCAGGATTCAAAGCCTTGAACTGTGGTGACTCTTCTTTTCTGGAGAAGACTAGTTCGCTGTGTGCCTCAGAGTATCAGGGCCACCAAACCATTGCCTCCACCTGATACCACCGGAGTGTTCAGTCCCAGGTCAATCCCTTTAGGACAGAAGTTTGTTTCCTGATTCTAGAGTTACACCGTTGAGTGGGTGCATGCTCTGTCAACACGCATCTATTCACTCTCTGTGCAGGCTCCATGAGGGTCCGGCGTCAAGCCACTTTATATTGGGCCCTTTTGTCCTCTGGGTATTTTCCAGGGGACACCGTGGGCCTGAGTCTCCCTCCAGGAGGTGGGAAATGAGTCTGGCAAGCTAGAGTTTTACCCATTCTGTGGGTTGGGGTTCCAGGTACCCCAACAGTTACCCTGATAACATCTGGAGGAGGGTTGGGCTTCGGCACAGAGCAGTGGCCATGGTGGGAAGGATCCGCACTCAGCCCCGAGTCGACTCAGGAAGCAGTGATCCTGTGCGGAAACCACACAAGCTTGGGAGACTGCAGACTGAGAATTCCTGTTTCATGGAACACAGGATATTACTGCAGCCAGTCTCAGCATTGTCAGGGGGTGAACAGAGTCCAGCACAGGTCAGGAAAAGGTTTGACTACAGCTGAGAAGCCCTTACTGTGTTAGTCACAGACCCTCGCAGCTTGGAGGATGTGCCAGCAGAGCGCTGGTTCATACTTTTGGTGCGGTCTGCAGGAGCTTCTGCTGCTGAGTCCATGTCGAGTGGCCAGTGGTTCCCACAGTCCCTCAGAAAGTTTATCTTATCCAGTTCTTCTCTGTCAGTGAATTGTTCCCAAGAAGAAAAGTATTTCAAACAACACTTGTGAGTGCCTTAAAGGTAGAGAAACGACTGTCAAAGCCAGGTGACAGGGAGGTCAGTGCCCGGAAGCCATGAGAACAGGCTGGTCGTGAGCAGAGCCCGGTCCATGGGAGACGGAGTGGATAAAAGGCAGGTTAGCAGCACCCTGCATGATGTCCAGTTTCAGTATAGACACAGTACCCCAACCTTCCTAACAAAGTCTGTGTGTAAGGAAAGAATCTGTTCTCAGTTAGGAATCTGCTCCAAGGAGATCTGAAACCTACCCAAGTCAAAGAAACTTACCAAGCAACGTAATTCGTGTTTTCCTGAGTCCTCTAGACGTTCAATTCAGGAAAAGACAGGGAGGCAACTATGAGAAGTCTGCCCTTTTTAATTCAGCCATCTGAGGACTGCAAGTGCAGAAGGAAATCTAGTCAGTAAGGCATAGGGCATGCTCTGGTTAAGAATAAAATAGTTTAGTGGTGAAGACTCAGACATTCTGTACATAAAATAGTCCAGGCAAGGTCAATGGGCAGGTATAGACTCATTTACCAGTGGACTATGACTCAGATCTACAGGATCGAAGATTTGATCCAAATGAGAACAGATTCAGTTCTTACAAGTAAGAAAGCCTCAAGAAGTTATCTTTTTGCAAAAGAAACAGTAAATGATTTAACAGTCCTCATATATGTTAATGTTTCAGATGTATTTGTATCATAATATGTAACATAATGTGTAACAATATCTGCAGTAAATCTTTTGGTATTTGTGATGGGATTTTCTGAGTTTGGGGGCTTCCCTGATAGCTCAGTTGGTAAAGAATCCGCCTGCAATGCAGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGAGCCCCTGGAGCAGGGAAAGGCTACCCACTCCAGGATTCTGGCCTGGAGAATTCCATTGACTGTATAGTCCATGGGGTCGCAAAGAGTCAGACACGACTGAGGGACTTGCACTTGCACTTTCTGAGTCTGGAGCACTGCGCTTGGGTAGGGTTTTTCTTAGGTTAGGTCCCAAAGAGCTGGGGCGAGGCAAAGGTGTAGGGGTTTGTGTATTTAATTCTTCCACTTGTTTCCAAAAAGAATTTGCAGCTAGTAAAAGAAGGATTACGGTTATATAAAAATCTGAAAAAGTTTTGGAAGGATGCATGTTGGCCCTGGACATATGATTTCTGACAGCCTAGAGTGAAGGAAAACAACCTGGGGTCAGACCCCCCTTAAAGCCAAGGCAATGAGGGAAACAGCTTCTGATGTCCAACCAGGAAGCACACTGGTCCGTTTGGCAAGAATGGGTCTCTGCTGAGGCCTGGAAAAAGTTACTCCTGTGACCCGGTCCTGCTGGGACCATCTGCTACCACAGAAAAAACTACAGGAACTGCAGAAATATTTCAGAAATGACTATTTATATCCACCCTTAATAAGAACTAAAGGCTTTGTTTTGGAAGCTTTGGTTCTTCAAAGATAAGAAGTTCTTTGGGGAGGAGGCCCTGGGAGACAATCCAAGTATGAGACTTCACTTGGTGTCAGCCTTCAGGGAGTCTGATGGTCTGGAGAAGAATAGGGGCATTGCTCAGGCCCCTTTCCTGAATGTTCTGTGTGTCAGCCACAGTTCCGACAGCAGCCACAGGACAGTGTCACAGTACCTTATCGGGGACTCTCTTCCTCACCGGAGGAGCCTGTGTGTGGCCGGCAGAGCTCAAAGGATCCCCCGTCGGCCTGGGGCGGGCTGCACAGCCAAAGTTCTCTCAAGTGCTGCTTTTTGGAGTTTGACCTAAAATCCTGGAGTTATTACAAGGATGAAAATATTAGCATTTGTAATGGGTTTTTCTCAGTTGGAGCCGCCAGTCTTGCTGTCAGTGACTGGGGTCCTTCCCTCTGGTTGGGCCTCCTCACAGCTGATCAAGCCTGCTACTGCAGTGCTAACTTGGTTATGGAATAATTAATTTGAACTCTTTCTGTTGGCTAAAATTACCTAACATATTAAACTTTTAATTTAATA EMBV3_12364 CATCACGTCCCTCTTCCTGAGAGCTACAAGCCAGAATATAGAGCGGACATTCGAGCTTCT Gene GeneID:513571|SPESP1:NM_001079773:143_cdna Constitutive 0 NULL GeneID:513571 10 GENE SPESP1 NULL sperm equatorial segment protein 1 EMBV3_22609 TACAAGGCTAACAAGGAGGTGATGGAGAAGGCGGCAGAGGTCTACACCCGGCTCAAGTCT Gene GeneID:512959|HDGF2:NM_001105361:21_cdna Constitutive 0 NULL GeneID:512959 7 GENE HDGF2 MGC165989 hepatoma-derived growth factor-related protein 2 EMBV3_39921 TAACAGGCTCAGAGAATTAAGTTACCAAAGTTCAAGCAGCTCTAAAGTGGCAGAGTCAAG Gene GeneID:617204|LOC617204:NM_001076448:114_cdna Constitutive 0 NULL GeneID:617204 28 GENE LOC617204 NULL similar to HEAT repeat containing protein 1 (Protein BAP28) EMBV3_06406 CAAACAGCTCAGCACCGTTGAGTCCGTGCAGATGACCAATGATTCTACCACAGCCAATTG Gene BVT0101_005893 - 0 NULL GK000001.2:127416648-127469553 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03093 TCCACGTCTTCAGAAAGTCTGCTCTGCTGGGGCTCACTCTGCCATCCAGCACTGCCCTGG Variant GeneID:507138|ISG12(A):NM_001038050:187_cdna 85^234 1 EMBV3_16907 GeneID:507138 21 GENE ISG12(A) MGC133942 putative ISG12(a) protein EMBV3_38419 CCTTTATGTATCTGACATTATGTATCACAAAACATGTAAATAAGACCAGCCACAACCAGC Gene GeneID:510381|SMC6:XM_002691475:351_cdna Constitutive 0 NULL GeneID:510381 11 GENE SMC6 NULL structural maintenance of chromosomes 6 EMBV3_31747 GAGGAAGCATGTGTTCTGTGAGGTTGTTGGGTGTATGCCCGAAGTGTCGGTTGCTGATGT Gene GeneID:767931|NHP2L1:NM_001077004:228_cdna Constitutive 1 NULL GeneID:767931 5 GENE NHP2L1 MGC129115 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) EMBV3_36379 CCTCCTTCTGGTTTTTGATCAAAATTAGAACTTCCCAGATCCCATAGTGCAGCTCTGAAG Gene BVT0102_223594 + 0 NULL GK000017.2:6207769-6517394 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08488 AAGTCAGGCTGGAAGATTTGCCGGGAAGGCACCCTGCTCTTCAGCAGAACCACTACCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31791 TAAGCATGACTCCTGGGCCTCTTGCCTTGAGCAGCAGAGTGGATAGTGTTGCTGTTAACT Gene BVT0102_078351 - 1 EMBV3_43689 GK000002.2:122170080-122194333 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18363 ACATCTTGAAATTTTGGACTTGGAAAGCGATAGCTCTGCCTAATCAACGTCTTAGAAGAC Gene GeneID:535347|FYB:NM_001105414:54_cdna Constitutive 0 NULL GeneID:535347 20 GENE FYB NULL FYN binding protein (FYB-120/130) EMBV3_06121 TGGTATGAAGTAAGGATATAACTTCCTCTTTTTTGGCATGTGGATATGTAATTGACCCAC Gene BVV0102_430797 - 1 EMBV3_20183 GK000009.2:87001717-87158384 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31463 AGTGACAGCAGCGACAGCAGTGACAGCAAGAGCAAGTCTGGTAATGGCAACCACAATGGA Gene GeneID:100337125|LOC100337125:XM_002688409:91_cdna Constitutive 0 NULL GeneID:100337125 6 GENE LOC100337125 NULL dentin sialoprotein DSP-like EMBV3_41749 CAGCTGTTGACTTCCGGTCACTGAACCAGGTGGCCCGGCACAAAGTTTTCTGTAGGAAAG Gene BVV0102_048375 + 0 NULL GK000028.2:35142182-35167544 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159628 TCONS_00159632 TCONS_00159633 TCONS_00159627 TCONS_00159631 TCONS_00159625 1 XLOC_097457 Coding TCONS_00159632 XLOC_097457 Coding Coding ZMIZ1 28:35115818-35145884 j TSS119566 6605 1 TCONS_00159632_6 887 18 0.780908032596042 3.36462333667001e-07 7.50925517064489e-11 8.5140490194273e-05 2.48935703145117e-21 0.000112187607764117 1.53027245900614e-13 6.09432211787404e-05 1.00207913357956e-42 7.30344683907069e-05 5.48137343813897e-05 1.24818083987624e-05 5.49626908004552e-05 1.21163262314199e-17 9.95238236844815e-13 3.00082186340108e-05 0.000217381485196521 5.39593471474737e-05 0.000163480449168896 0.000149726567329155 4.66525796067526e-08 4.12283915252395e-08 7.30656496226302e-05 0.000147870754147036 1.84329111071873e-12 9.30439758084094e-05 8.73767099906782e-05 1.55912971953283e-07 3.78022257494241e-05 3.91787022089401e-05 9.92439328324609e-05 XM_005226519.1 ZMIZ1 PREDICTED: Bos taurus zinc finger, MIZ-type containing 1 (ZMIZ1), 0.0 1.147e+04 100.00 0.962604087812263 XM_005269987.1 ZMIZ1 PREDICTED: Homo sapiens zinc finger, MIZ-type containing 1 (ZMIZ1), 0.0 4414 93.83 0.438152914458743 TCONS_00159632_6 sp|Q9ULJ6|ZMIZ1_HUMAN ZMIZ1_HUMAN Zinc finger MIZ domain-containing protein 1; 0.0 1641 98.09 0.998872604284104 1 coding 1 0 1 1 -0.0179126863095758 0.909034915568719 0.0067262825927636 0.892303060934491 GCAGGGAGGTACTCGGGCCCCAAGCATATGAGGAGCAAGTGGAGCTCAGGTCCGTGGATGTGGTGAGGGCTTCCTGCTAGAGGCGGCCTTTGGAGGAAGAGACTAAAGTGATGGGTCATTCCCCTATGACTCTGTCCCTTGGCAGCAGAACACCAACCAGCCTCCCGGCTCCCTCTCTGTGGTCACCACGGTTTGGGGAGTGACCAACACATCCCAGAGCCAGGTCCTTGGGAACCCTATGGCCAATGCCAACAACCCCATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGACCACCAGCAACCCCGGCCTCAACTCCCCACAGTTTGCTGGGCAGCAGCAGCAGTTCTCAGCCAAGGCTGGCCCCACTCAGCCCTACATCCAGCAGAGCATGTACGGCCGGCCCAACTACCCCGGCAGCGGGGGCTTCGGGGCCAGTTACCCTGGGGGTCCAAATGCCCCTGCAGGCATGGGTGTCCCTCCACACACCAGGCCACCCGCTGACTTCACTCAGCCAGCAGCTGCCGCTGCAGCAGCTGCAGTGGCGGCGGCAGCAGCCACGGCCACAGCCACAGCTACGGCCACCGTGGCAGCCTTGCAAGAAACACAGAATAAGGATATAAACCAGTATGGACCGGTCTGTTCCTCTTTCCAGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCTCGGGGGCCTGCCTCCATGGGGGGCAGCATGAACCCCGCAAGCATGGCGGCTGGCATGACACCCTCGGGGATGAGCGGCCCTCCCATGGGCATGAACCAGCCCCGGCCGCCCGGCATCAGCCCCTTTGGCACACACGGGCAGCGGATGCCCCAGCAGACGTACCCGGGCCCCCGGCCCCAGTCCCTTCCCATTCAGAGCATAAAGAGGCCATACCCTGGAGAGCCTAACTATGGAAACCAGCAATACGGACCAAACAGCCAGTTCCCCACCCAGCCAGGCCAGTACCCTACCCCCAACCCCCCGCGGCCGCTCACGTCTCCCAACTACCCCGGGCAGCGGATGCCCAGCCAGCCGAGCACTGGGCAGTACCCGCCCCCCACGGTCAACATGGGGCAGTATTATAAGCCAGAGCAGTTTAATGGACAAAATAACACCTTCTCTGGAAGCAGCTACAGCAACTACAGCCAAGGGAACGTCAATAGGCCTCCCAGGCCAGTTCCTGTGGCAAACTACCCCCACTCACCTGTTCCAGGGAACCCCACGCCCCCCATGACCCCCGGAAGCAGCATCCCCCCATACCTGTCGCCCAGCCAAGACGTTAAGCCACCCTTCCCGCCTGACATAAAGCCAAATATGAGCGCTCTGCCGCCGCCCCCAGCCAACCACAATGACGAGCTGCGGCTCACGTTCCCCGTGCGGGACGGCGTGGTGCTGGAGCCCTTCCGCCTGGAGCACAACCTGGCCGTCAGCAACCACGTCTTTCACCTGCGGCCCACGGTCCACCAGACGCTGATGTGGAGGTCTGACCTGGAGCTGCAGTTCAAGTGCTACCACCATGAGGACCGGCAGATGAACACCAACTGGCCGGCCTCAGTGCAGGTCAGCGTGAACGCCACGCCCCTCACCATCGAGCGCGGGGACAACAAGACATCCCACAAGCCGCTGCACCTCAAGCACGTGTGCCAGCCAGGCCGCAACACCATCCAGATCACCGTTACCGCCTGCTGCTGCTCCCACCTCTTTGTGCTGCAGCTGGTCCACCGGCCCTCTGTGCGCTCCGTGCTGCAAGGCCTGCTCAAGAAACGACTCCTGCCTGCGGAGCACTGTATCACGAAAATCAAGCGGAATTTCAGCAGTGTGGCGGCCTCATCAGGCAACACGACCCTCAATGGGGAGGATGGCGTGGAGCAGACAGCCATCAAGGTGTCTCTGAAGTGCCCCATCACGTTCCGGCGCATCCAGCTGCCTGCTCGAGGCCATGATTGCAAGCATGTCCAGTGCTTTGATTTGGAGTCATACCTGCAGCTGAACTGCGAGAGAGGGACCTGGAGGTGTCCTGTGTGCAATAAAACCGCTCTGCTGGAGGGCCTGGAAGTGGATCAGTACATGTGGGGCATCCTGAATGCCATCCAACACTCCGAGTTTGAAGAGGTCACCATCGACCCCACGTGCAGCTGGCGGCCAGTGCCCATCAAGTCGGACCTACACATTAAAGATGACCCTGATGGCATCCCCTCCAAGAGGTTCAAGACCATGAGTCCCAGCCAGATGATCATGCCCAATGTCATGGAGATGATCGCCGCCCTGGGCCCTGGCCCATCCCCCTATCCACTCCCGCCTCCGCCTGGGAGCACCAATTCCAACGACTACAGCAGCCAAGGAAACAACTACCAAGGCCATGGCAACTTTGACTTCCCCCACGGGAACCCCGGCGGGACGTCCATGAACGACTTCATGCATGGGCCCCCCCAGCTCTCCCACCCCCCGGACATGCCCAACAACATGGCCACCCTCGAGAAGCCCCTCAGTCACCCCATGCAGGAGACTATGCCACACGCTGGCAGTTCTGACCAGCCCCATCCCTCCATACAACAAGGTTTGCACGTCCCACACCCCAGCAGCCAGTCAGGGCCTCCATTACATCACAGTGGGGCTCCTCCTCCTCCTTCCCAGCCTCCCCGGCAACCGCCACAGGCCGCTCCCGGCAACCATCCACACAGCGACCTGACCTTTAACCCCTCCTCAGCCTTAGAGGGTCAGGCCGGAGCGCAGGGAGCATCTGACATGCCGGAGCCTTCGCTGGATCTCCTTCCAGAACTCACAAACCCTGACGAGCTCCTCTCATATCTGGATCCCCCTGACCTGCCGAGCAATAGTAACGATGACCTCCTGTCTCTCTTTGAGAACAACTGAAGCCCACCCCTGCATCGGGGCCACCCCTCCCCACTCGGCCTCCTTCCCCGTCTGCCCCACACACTTCCCCGCTGGGAGCCCGAGCCCTCGGACCGCCCCTTCTGCGGCCTTCAGAGCCAAGGGGCAGGAGGGTGCGCTGTGAAGGCGGTGCGGGTCTGGAGCCCACGCCCAGAGCAGGCCCTGAGGATGACCCTCGAGATGGGGCAACAGCCCAGGGAGGGGGCACACGCTGATGGCGGCTTCCAGACGACCCTCCAGTGCCCCCCAGATTCTTCCAGTTTGTAAACTGTAACCCAGCTTCCCTGCTTCCTGGCCCAGAGCCATCTCCAAGTGACTGTGACCCTGAGAGAGAGCCCCCCAGACCCCGGCGGCCCCAAGCCTTGGAGGAGCAGCGGCGGTCGGCAGCAGTGAGAACGGCCTGCCCACCACCACCACCACCACCACCACCACCACCACCACCCACAGAAAAGCACAAACCTCTGGGCAAGAGAACTCTCAGGGGCCAAGGTTATCGCTTTGACCCCAGACCTCTTAAGCCAGGATACCCTATGAACAGTCTCAGAAAGCAGAGAAAAAAGACAAGATTCTGTGTTTGGGAGAGGGAGAGCCATTCACCCTCTTGCTCGGGGATGGGTGGAAAAAGGGAGTCAGGGCCTCTCAAAGCCAGGATGGCCCTAGAACCACTGACTCAGGCCAGGGTCCAGCCTTGGGGAGACGGGGGTGCGAGAAAGAACCCAGCTGAAATTATTGTGCCCTTAGTTGGAGGGAGCGGGGGCCACCAGTCAAAGTTGGAGTCCAGTAGAATCAGCAACTTACAGTTTTGCTCCAAGCCTCTCCTTTTTTTTAAACGACCGCAACAAAGCTACGAAGTCACTTGGAGAAGAGGAACACTGGACTTGGACAGCAAGTGAACCATTTCTCCCCATGTGTTCTGCTTCCTTCCTCTGCTCCCCCGCCCCAGCCCCTCTGAGACTGTTACGTGGGATGCCCACGTCCCTCTGTCCCAGTGCCCGTGTCCGCCCGGACGGCAGGGTGGGTGGTGGAAAGGCAGGGCATGCAAGGGCTCAGCAGCAGGAACCCCGGGCATCGCTCCCTCTCCGGCTCCTCTGCCTGTCTGGTCTGTGCTCCAGGCTGCCCCGGGCTCCAGCCCAGCCCATCGCCGTGTGTGCCAGGATCAAGCATCGCATGGTGTTTCTGTGGCTGTCTCAGCCCCAGCTCTTGGCCGCCAGCCTCTCCCTCGCTTCGTGTCCCTCTGCTCTTGCAAGCTCACCTCACACTCCTGCTCCAGCAGAAGCAGCGTCTGGTCTACCCTCCATGCTTTGCTCCATCCCGCCAACCGCTCGCTCTCACAGTGCCCCGGGTAGCTTTCTGTGCGTCCGTTTTGTTGCAGGCTCCCCTGTGCTCCCCGAGCCACGTGGGCTGTGATGTTGGGCGGTTGGGTCGCTTGGGTCACCTCTGTAAATTTGTCGTGCCCCTCCCCTGCTGCTGCCCAGGACCTTCACTCGCTCCCCCGTTCACTGTCTGTGTTTTCAGTGTCTGTCTCCCCCTCTGTTGGCCGGGGGACACCCAGCACTCCTCTGGATTTGACCGGAACGTTGGCCCCAGCTGTTGACTTCCGGTCACTGAACCAGGTGGCCCGGCACAAAGTTTTCTGTAGGAAAGCTGCCATCGTCCCTCCCCCACCCCTTTCCTTTGTCCCGTTGTTGAGGTTTTTTCAAACAGCGTGGTGTTCCGTATGCAAATCAATTATTTTAAGAATTGCTTTTGTAAATATCTTTGTGAATATTTTAGTATTGTCTTTGATAATATTCAACATTTTCATGACCTGGTTATAGCCTTTGCTGGTGTTTTTAAAATACCTTGACTCAACGACAAAGACCGAGTCCCTTTTTTAAAAAAAAAAAACAACAAACAAAAACAAAAAAGCAACCAGGGCCATTTGTACAGATGAAGGGATGAAAAGCATGGGTGGCTGTACCGTGAGTTAGATGAAGACCAGGCCACCCGCTGTTGGGAGCCATCCCCAGTTGGCTGGTGGGGACACGTGCGGCCATCTCCGACCAGTGACCCTTAGCCCCAGCTGTGTCAGGCCATCTGGGGATGCCCCACCCCAGACAGACCTATAGATGCCTTCCTTAGAATTTCCCGCTTCCTGCCTTGCAAGACTGTCTCAAAAAGGCCTGGGTGTGTTCTTGTTATCAGGGTGTCCCCACTCTGCTCACCAACTTACCCACAGCTTTCTAGCACAGAGGGTCTATCTACTGCCCACAACCCAGGCTCTGGGCACCTCCCTCATCCGTCTCTGAGTAAGCCGTGGGCTCAGCACCCTGAGGTGGATTTCCTGGGTCCCCTCTCAAGCAAGCCTCCACCAGCAAGTTCAGCAGAGAGCTTTCCAGACCTGCGGTGCCTGCATCCTGCACTCCGGGCACACACTCTTCCAGAGCGATTTTGGAGCCGGGTTGGTGGGGTGGGGGTAGGGGGGTAGGCATCAAGGTGTCCGGGGCTGGAACGAGCCCTAATTGGTGACACATTCAGGTGACGACGGCTTCCCCAAGCAAGAGCGGTTCTGAACTCCGGGGAGATGCTTCCCTGACCCTTTTGGATGACTACTTGGAGCCATACGTAACCTCAGCAAAAACGATGCCTCAGCAAGCCACGTCTCCATGACAAGCATCCACCCAGGCCACAGGCACGCTGCTGCCTCCACTCCACGGAATGGACAGGGCGCCAGCAGGCAGGCGGGAAGGCCCAAGTACAAGCAGTCACCCCGTCTTCTTGGTTTGAAGCTTTACCCATGGGTCATATTCCTGTAGCCATTTTTATTTTTTAAGGAACTAATACTTTCTCCCTAATGGAAGCCCTGAGCCCCCAGAGAGCTCCACGCCTGCTCCCTCGGCCTCACCCAACCAGACAGGGCGACGCAGGCAGCAGCCACTCAAGGGACATGTGTACATATGTAAATGAGAAATAGAGACATGTTAACAGATGCATTCATTTCCCTCGGAATGTGTATTGTTCTTATTTTACGGAACAAAACAAAAAGGCTTGGAACTCCATCTTAATGTGGGAAAAAAAAACTAGATCCTGTCTGTTAGCGTCTGTGAGGTCTCTCTCCGCATCTGTCTCATCATGTAATATACTCTGACTCTGTGTGGAAAGGAATTTTTTTGTTCCGTTTTTGTTTTTATTTTACCTACATGTACTATTTAGCTTCAGTGTACTAGTCCCACCACCTGTGTGTTTTTAGGGTGCTATGGAAATAATGAAAAGAAACGGGGATTTCAGAAGAAAATTGTAACCAAATTCATCCTTTGTATAATTTTTGATATCATGATCGCAGGTGATTGACACACACACATGAACACAAACCCACCGTGCAGCCTGAAGTAACCCCCACAGCGACGTCATCGTCTTTGTACATCTCTGTACAATGCAATCATTTCATACTTTAAACTGGTCAGAAAACTAATTGTGATTTCTAGTCTTGCAAAACTGTATGTAGTTAGATGATGTGACAGCCTCTAATATTTATCTAATAAATATGTATTCAGATGAAACCTGTATATTAGGTGTTCATGTGGTTATTTTGTATTTAAAGATCAAATTATTTGACTATTGCTAGACATTTCTATACTCTGTTGTAACACTGAGGTATCTCATTTGCCCATGTTAATTTTTTTTCTAAATAAATGGACAAAAACGA EMBV3_40530 CTCTTGACTAGTTTTCCTTTGAGTTTGTGAGCTCTTCTCCTTGTAGCCCTGAAGGGTCAC Gene GeneID:533980|CKAP5:XM_002693537:151_cdna Constitutive 0 NULL GeneID:533980 15 GENE CKAP5 NULL cytoskeleton associated protein 5 EMBV3_39722 ACAAATGTTGCCTGGGAGCCTGTTTCCTCACTGCTTACACAGCCATAACACATCTCTCTC Gene GeneID:618367|LOC618367:NM_001105009:140_cdna Constitutive 0 NULL GeneID:618367 29 GENE LOC618367 NULL hypothetical LOC618367 EMBV3_42422 CAAAGACGTCAACGCGGCCATCGCCACCATCAAGACCAAGCGCACCATCCAGTTTGTGGA Gene GeneID:100295712|LOC100295712:XM_002694681:253_cdna Constitutive 0 NULL GeneID:100295712 17 GENE LOC100295712 NULL similar to tubulin, alpha 3c EMBV3_19621 GGTCCCATTTCCTCTAGCAGTCTCATGCTCTTCTCCCCACATCAACCCAAAGTCTGACAT Gene GeneID:509133|MIA3:NM_001166571:38_cdna Constitutive 0 NULL GeneID:509133 16 GENE MIA3 NULL melanoma inhibitory activity family, member 3 EMBV3_17975 TGTCACAGTATCGAACAGATGAACAGTAGAGATGAGACCGGCATAAAACGCTCGCCCACC Gene GeneID:100138517|NUP62:XM_002695123:622_cdna Constitutive 0 NULL GeneID:100138517 18 GENE NUP62 NULL nucleoporin 62kDa EMBV3_35122 TTTATGGAACAGGTCTTGGTGTGTGCCTCAGTTCAGCCATTTCACAATCTCCCAGGAAGG Gene GeneID:787445|LOC787445:XM_002688819:259_cdna Constitutive 0 NULL GeneID:787445 7 GENE LOC787445 NULL similar to Olfactory receptor 18 (Olfactory receptor 145-1) (Olfactory receptor TPCR34) EMBV3_07258 CCCTGCTGGGTGTGTATGTGTTGGGGGTGGTTCTGACTTCTCTGTGTGGATACTCAGATT Gene BVV0102_229151 + 0 NULL GK000007.2:67719276-67737273 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00217557 TCONS_00217558 TCONS_00217562 TCONS_00217561 1 XLOC_131538 Coding TCONS_00217557 XLOC_131538 Coding Coding SAP30L 7:67732346-67745739 j TSS161988 4884 5 TCONS_00217557_1 112 6 0.635752688172043 0.000806156965637328 0.000103928106086319 5.71477895465063e-05 0.000124154292976961 3.95740390188359e-09 0.000146357733971749 0.000699403653263708 3.50021741997953e-09 0.000427407557613499 3.45781144775361e-05 2.6212507624851e-05 2.34954376743905e-05 5.38893163142238e-06 8.19455862262572e-09 1.14463645873814e-12 0.000908353743472369 1.91411602441358e-08 9.47704382794543e-05 0.000594525784198077 4.5872963602794e-09 1.96291156824084e-10 0.000618358887935582 5.36040267488504e-22 0.000617146489916322 0.000385567897058901 0.000224239140060257 0.0003438406327508 0.000325844936318213 0.000149884950140057 0.000343395837789983 XM_005193529.1 LOC100851455 PREDICTED: Bos taurus histone deacetylase complex subunit SAP30L-like (LOC100851455), transcript variant X2, mRNA. 0.0 7393 98.93 0.858108108108108 NR_024084.1 SAP30L Homo sapiens SAP30-like (SAP30L), transcript variant 4, non-coding 0.0 2309 78.87 0.555282555282555 TCONS_00217557_1 sp|Q9HAJ7|SP30L_HUMAN SP30L_HUMAN Histone deacetylase complex subunit SAP30L; 7e-66 201 97.25 0.955357142857143 1 coding 0 0 0 0 0.0184368632434581 0.915160163813372 0.0220894984306179 0.789200004970536 TGTCTCCCGGCGGGGCCCTGCAAGCCGCGGGAGACGACCCCGGGGCCGCGAGCAGGGAAGAAGGGGCTTGGTGGAGACGCGGGCCGGGAACCGAAGGAGCCGGAGCGCGGCGGAGCGGAGCCGGGCCTCCCGGGCGTGGGGCCGGGCAGCGCCTCGGCTGAAGACGGACTCTGGGACCCTCGAGTGCGGGGGCCTCGGCGACCTGCCCCGCGGGGAGCGCGGCTGTGGAGTGGCCTACGGGGGACCTTCCCCCAGAGGGGGCCGGCCCGGGGCGAGGAGATGAACGGCTTTAGCACCGAGGAGGACAGCCGCGAAGGGCCCCCCGCCGCCCCCGCCGCCGCCCCGGGCTACGGCCAGAGCTGCTGCCTCATCGAGGACGGCGAGCGCTGCGTCCGGCCCGCGGGCAACGCCTCCTTCAGCAAGAGAGTCCAGAAGAGCATCTCGCAGAAGAAACTCAAGCTGGACATCGACAAGAGCGTAAGGCATCTGTATATTTGCGATTTCCACAAAAATTTCATCCAGAGTGTACGAAATAAAAGGAAGAGGAAGACAAGTGACGATGGCGGAGATTCTCCTGAGCATGACACTGACATTCCTGAGTGCTCTCCACCTGCCTGAAGCAAGAACATCTCTTTTAGAGGCAGGTTGATCTGTTCCAGCTGCAGGTGAACACTCTCCGACGTTATAAACGACACTACAAATTGCAGACCAGACCAGGCTTCAATAAGGCCCAGTTAGCAGAAACTGTCAGCCGACACTTCAGGAACATACCTGTGAATGAAAAGGAGACCCTCGCTTACTTCATCTACATGGTGAAGAGTAACAAGAGTAGACTGGACCAGAAGTCAGAGAGTGGCAAACAGCTTGAGTGATGATGAAGCACACCTTCAAGGAATGAAGTATAATATTAATGCACAGGTGACATCTGCTACATTTAAGCCCATAAAGACTGTTAAATTTTATTGTAAATAAAAAAGTTTGAATAATGAATACTGTAAATCTTTTCGGGCAGGAGGATTATATTCTCATGATTCAGCATGTTTATACACAGACTTTCTTTTAAGGCAACTACCGGACTAAAAAAAAACACAAGATTGGAAAAAGAAGGAAAGGAAAACAGTGCATTGCCGCATTCTGCAGAGCATTAAGTCACTTCTGCTGGACGTGTGGGATGACAGATATTTTGGTATTCACCTTGTAATTCCACGCAACCACTTGTGAGGTATAGCCCCGGACCAACAGCGAGGTACGGCTGGCAGAGAGGTGCATGAGCAGACATCTGCCCGGGACGTAGACACCACGCTTTGTCACTTATCAGCAAATCATTTGACCCCGGCCCCTCACCGGCTCTGTGCTGTGCACACAGTAGGCACTCAGGCAGGGTTTACTGGCACATCCAACTGTCACTAGCAGAGCCAGTCTTGGGCTTCCCACCTCTTGGTATCAAGGCCTCTGCTGTTCCTGTTGCTCACCACTTCACTTCTAGAGCGTGAGGAAGTCCTGATGCACCAGCAGGAGGTTTCAGGTCAGACCGGGACTCCAGGGCAGACTCATGTGCCAAGCTGTATTTGTGGAGGTGCCAGAAACCCTGATGCAGAGCTCCTCCTGGGAGCCATGGTCCGTTGTGCACCCCTCCACGCTTCATGCTTCAGGGTCAAGTGATGTATTGGGACTTCATTCTCCTGGGCCAGAAATGCTTTGACACATGGAGACATTTAGTGCTTTGGGGCTCATGTTTTCAGAGATACTAATCCTTAATTCACAACCACAAGGAAGCTTCCAAGGATCGGGTGGTTTCTGCTCCGAAGTCCAGCTCTGGGATAGAAAGTCTGACCAGCTTTGGCCTCTTTGGGGGTCAGCAACAAATCATGGGTTTGAGCAACACAGGTCAGTGCCATCTGATGTTCATTTTTGTGAGCAATTTGCCTCTCTTTTAGGGGGAAAGTTGCTAAAGTGTTTTTTTTCTTTTTAAGTATTAATAATTACCTAATTTTTGTTGTTGTTGTTCAAAACCTCAGATTCCTCTATCTAATTATATCAGAGCCAAAGTATCCTTTGAAAACAAAGCTTTATATCCAAAAGTATGCTTTTGCAAAATTTTCTAGTCAGTGTATTGGAGGGCAGAGGATGTGGACAGGGAGTGGGAAGAAAAGAGAAGAAAGGACTTGAATTCTAATTTCTGACCACCTTGACATATTGTGGTCAAAGGTACCGCTTTCTAACTCAGTTTTCATTCTGAGTTCTTCCTTAAGCCTTAAAAAATAGAAGCAGCATTGGACAGCGTAGCCTGGCAGAGTGTTTTAGTGTCTCACAGATGACTTAATCTGAGTATCCACACAGAGAAGTCAGAACCACCCCCAACACATACACACCCAGCAGGGTGGTAGAGTGGCCAAAGGTATCCGTTCCACGGAGCGTGCTTTCTATGGACGGTTAGGGCCACCACTCTCGCTCAGTAGCTCCATGTGTTCAGCTGCAGCCCAGCTTTCACCAGTGTTCACCACGCATGTCTAGCAGGTTGCAGCCTTTTAAGATATGTGTACATGAATGTACCTAGAGCATACTTGAGACTGAGTGGATCTTATCTGCGTACACCTGGCCATGGATGGCACATCAGGGTGTTCTGGGCGTGTTTCCAGTTGTGCAGATTCAATAGGTGTTTAGAGAGTCTCACTACTCACAGCTAAAGGCTCTTGATGTGTGGGCATCAAGAAGGCTCTAAAGTAGATTTTTATTTTCCCCTGAGGAGCTGAGTTAGAACGGCTTTGAAGGCATCAAACACCAAGTCCCCTTTATCCAGGAAAGTGTTTTCTTGTCAGGCTGGAGTTTGGGGGCAGATAGGCTTAAGGCATTGGAAACCTGCTCTCTGGAAATGTCCACAACTCATTGAGAAAAAAAGTGTATTTTTCTGATGTTTGAGCCAGAATTGTGGACGTGTAGGTCATGTCACTGTTTCTTCAACAGCAGATCTGTGTTCCCAGTTAAGAGACAGCAGTGCACTTCTGTACAAGAAGCTGTGGTATTAGGTTCTGTCTGTTCAAGCATGGCTGTGAGAGTGCTTTCGTTCCCATGTGAAGCCTGGGGAAGCTTCCCCCTCAGCCAGATGCTATGCGCCCTCAAGTCGTGTGCCAGCTCTCCTCTAAGGAGAGGGCCTTTGGAGAGTGGAGCTTGTGGGTGTCTTTTCAACCTTTGAAAGCATGTTAGATGAGAAAAAAGACAAAACTCTCTGAGCTTGTATTTTTCTTGTGTGCAGAAATCTATTTCATCAGACCACTAAGCCACTTGCCTTAGCCTCTTCTGCAACTTCCCTCGGTTTGATCTGGAGCAGGAGACGTCTACCTGTTAGAGGTGGCTGACCCTCCAAAGCACCCAGGTCTGGCTGTGGGGAGCAGTGGGGCTTGGGGAGCTCAGCGCTCATCGCGGCTGCCTGCGTTTTGCTACCACCTGTCAAGGACTCGTGCTTCTCTCCACCTGTCATGTCGCAGCATTGCCTTCTCTCCTCTTGGTGCTCCTGGGCAAAACTGGAATATGCAATCCAGAACTGGCTTTGTCTTCTTAAAGAGCACGGCTCCTGCCTCAGTTCCAGCCTGCTTGGTTCTTTCCTGTGCCCTGAAGAGTCAAATGGAATTGTCAACATCTTGCCATCCATGTTGCTTCCTTTTAAGGTTTTTAGAAAACAAATGGACAAACTTCTTATTTCAGTGAACAAACTCTTAGGTTGGCAACAGCATGTGAAAAAGATCATAGCCAAATCCCTTGAGAGATTGCAACCAAAGGATTCAAGACCAGGGGTGTAAAAGGAAGAGGAATTTCATGTATGTGATGCAGCCGCCAAGTTGTTAGATGTTCCTGTCATAGCTAAATAGTCACAGCTAGTCTTCCAGAGAGCAGATATGAATAACTGCTTGCAGCTGGAATGTTGCATCTAACCTTGGCATTTCAGCTGTTTATTTAGTGGGAACTTTTTGTTAACATCCTGGAGGGCACCTGCATTGTAGGAAGGAGAAAGCCGGAGTGGGAACTTACTCAGGAGCCCAACCACGGATCCCAGAGGTGTTGCTGCACGGAAATCATCTGAGGACTCTGTCATTACAGCGACAAGATCCAAAAGTTGGGAAAGGACCTCTAAGTCATCCAGTCCAGTCTCCCATAGGTGCTGACATTCTGCCTACAACCGTCCCACCAAGGTGGGTCAATCAGGTGACCCTGACTTGAGCAGACACAGCTCTGTGGCCCTGCCATTCGCAGCCCCCGTCCCTGTTAGCGAGAGAAGCAGTTGAACTGAAGGACAGGTGAGCTGAAGACCACGCCCTGGGAAGCGTGGTGCTCTAGGGGTGCTTTTGTATTCATTTTATTACAGACTGTTTCCAAGTTCATGGTCAGGAAGGGTAAAGTCAATCCCATTTTTTGAGGTGGAATCCAGCCGGAGGCAGGGTGGGACTTTTCTTACAGTAGGAATGTCTACAGTCATTTCATCTGGCTTGCATCTTCAAACTCTTCAGTGGCTTTCATTTAATGAGCACATCTTTGCCAGTGGCAGAGGCTTGTGCAGGATCCCTGTCTCACATGTCTATTATCTGCTCAGCCCATCAGAGTGTTTTAGGGGTGCGGGTTGGTTTGGGTTTTTTTTTTTTCCATTTTGTAACTGCCTTATCGAAAAGCAAGTGCCCTTCCATTTCAGGCCTCCTCATTGTACATGTTTCCTGCCAATTGGGGGGATCATTTGTATTTTAATTTTGTAATCTATGGCTCTGTACTGTTGAAAGGCTCTCAATTCTGTGGGGTCTCCTTAGTATGTATATGACTTTTCATGTTGCAATATCACACAGATGGGATGGCCCGAGTTTTGCTCTTAATAAACGATCTAAATGAGAAACAAGAGAC EMBV3_39886 ATGTATCCCCAACTCACAACTTCTCCCTGACTTCCCCAACCCTACTAAATCCCACTGAGC Gene GeneID:526104|LOC526104:XM_002691022:367_cdna Constitutive 0 NULL GeneID:526104 10 GENE LOC526104 NULL similar to Homeobox protein SIX4 (Sine oculis homeobox homolog 4) EMBV3_33898 TACTAGTGAATATACAGGGTTGAATGATTAATAACATTGAATACTTGAGAAACAGTGCCT Gene BVV0102_031626 + 0 NULL GK000004.2:33509019-33518952 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01531 ATCCCCACATTGCATTCTGCCTGCTTTTACCCTGAAGGACCTAATACTACTTTGTCTTCC Gene GeneID:538209|PTGFRN:XM_002686122:157_cdna Constitutive 2 NULL GeneID:538209 3 GENE PTGFRN NULL prostaglandin F2 receptor negative regulator EMBV3_17648 CAGCTACAACAATTTCTCCCCATTTAGAGGAGATGAACACCTAGTTAGATGAAGAACGTC Gene BVT0101_035773 + 1 EMBV3_03827 GK000022.2:29989524-30035340 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07775 ATTTGTAACCCACTCCTCTATTCATCAGTCATGTCGCCTGCTCTCTGTGGTCGGATGGTG Gene GeneID:100299686|LOC100299686:XM_002693809:48_cdna Constitutive 0 NULL GeneID:100299686 15 GENE LOC100299686 NULL similar to olfactory receptor, family 5, subfamily I, member 1 EMBV3_15310 TGAGAGGAGGGGCCGTGGTCTCCAGACTCTCTGGCTGTGGACCTTTTGGTCCCACTTTGA Gene GeneID:508138|THAP3:NM_001075347:76_cdna Constitutive 1 NULL GeneID:508138 16 GENE THAP3 MGC142506 THAP domain containing, apoptosis associated protein 3 EMBV3_24243 CCTCCTGCACTTCCTGTGCCTGGCGGCTTGGTCCTGTTACAGAAGTGAAAACTGACATAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37147 CTCAGAGCAGGAGGCCTGAAGAAATGGCCCCTGTATTTGTAACACACCCTAACAGGGATC Gene BVV0102_160073 + 1 EMBV3_39127 GK000003.2:19261021-19290675 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35733 CTGCGGCAAGGACGAGCCGGGGCGCTGAAGAGCCTGTGTCGGCCGCTCCCACAGAGCCGT Variant GeneID:327717|NDUFV3:NM_175830:8_cdna 80^200 1 EMBV3_42745 GeneID:327717 1 GENE NDUFV3 NULL NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa EMBV3_34392 ATAGCTGGGGAAGGCCCAAGGCTGCTCAGGGCGAAGAAGAGATGAACAGAAGAGTTTGAA Gene GeneID:539167|KCTD11:NM_001035421:150_cdna Constitutive 0 NULL GeneID:539167 19 GENE KCTD11 NULL potassium channel tetramerisation domain containing 11 EMBV3_12488 ACCTCCAGCAGAGGCTGCTTGCCCTCATGGACTCCTGGTGTCAGCCTGGCTTTGACATCA Gene GeneID:618437|EXD3:XM_002691692:21_cdna Constitutive 0 NULL GeneID:618437 11 GENE EXD3 NULL exonuclease 3'-5' domain containing 3 EMBV3_23647 TGGCTCTGTGTCCTTGCCCGAAGGTCTTTTCCAACCAGCTGAACAGGATCTCTTCCGTTT Gene GeneID:511138|LOC511138:NM_001075497:586_cdna Constitutive 1 NULL GeneID:511138 29 GENE LOC511138 NULL hypothetical LOC511138 EMBV3_21567 GCGGCTCATCTACCTGTATCACAAGTTCCATCAGCTAAAAGTGAGCAATGAGGAGTATGC Gene GeneID:541257|NR6A1:XM_002691601:168_cdna Constitutive 0 NULL GeneID:541257 11 GENE NR6A1 NULL nuclear receptor subfamily 6, group A, member 1 EMBV3_14468 AGAGGACGGTCTATTCCTATGACTGCAACTTCTCTGGAATGCTGGGTAAAAGTCCAAGCA Gene BVV0102_120768 + 0 NULL GK000009.2:35138862-35502172 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24036 GACATGTCTAATTTTGATCGTTTCTCTGAGGATTCACAAGACAGTGATGATGAAAAAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25491 CTGCTCGGACACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACCGCCACCCTTTGAAAA Gene GeneID:537224|LPIN1:XM_002707716:359_cdna Constitutive 0 NULL GeneID:537224 11 GENE LPIN1 NULL lipin 1 EMBV3_31405 GAGCCTGTCTCAGACGGGCAGATCATGAGCCCCCTGAAGCACTAAGTAGCCTACTTTCTA Gene BVV0102_065278 + 0 NULL GK000024.2:49098743-49176825 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23897 TGAGCTTCGAAGGAAGCTTTTTGCCCTGAGGCTAGGTTCTGGCCTTCACCTCTGTCTCGA Gene GeneID:281051|CD34:NM_174009:7_cdna Constitutive 0 NULL GeneID:281051 16 GENE CD34 NULL CD34 molecule EMBV3_25688 TTGGTTATGGCGAGGGAGGCAGGCCCCTGAATGCACTGGTGAGGGTTTCTATTTCAGCTG Gene BVT0102_023929 - 1 EMBV3_04000 GK000019.2:20441107-20442061 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092595 TCONS_00092596 TCONS_00092598 TCONS_00092597 1 XLOC_056928 Coding TCONS_00092598 XLOC_056928 NonCoding Coding SARM1 19:20438584-20441972 j TSS69637 2624 1 TCONS_00092598_4 158 0.0434451219512195 3 0.226158842633599 2.55538304748364e-73 1.58695708265095e-05 1.25603119229951e-193 0.00012092637426581 0.000302517936617686 4.25274807593239e-05 1.62112634304356e-05 3.83176439358763e-05 4.51011088608478e-05 2.72620689744055e-12 6.10612109799086e-06 0.000144443400654826 7.10558269040944e-06 5.66664353088054e-30 3.70735520915042e-113 1.7633885891314e-09 0 9.5539475165785e-06 0.000336178618111108 0 3.26989749033918e-05 1.97938237396833e-05 5.68780716424029e-31 2.1973267868714e-09 0.000213323886483087 9.81040315538292e-05 0.000144957214550154 2.00958333459128e-06 3.69877464002216e-06 0.000144878167838454 NM_001102518.1 SARM1 Bos taurus sterile alpha and TIR motif containing 1 (SARM1), mRNA. 0.0 3103 99.94 0.65625 NM_015077.3 SARM1 Homo sapiens sterile alpha and TIR motif containing 1 (SARM1), 4e-176 623 72.93 0.434832317073171 0 noncoding 0 0 0 0 0.220929391025195 0.335011498575215 0.0236323756283574 0.745715124297623 CACCCTCTCTGCACCTAGATGTGTTCACCAACCTACCTGGAGATCGTGACTGCTTTGAGCTGTGGCAAGAACATCGTGCCTGTCATTGACGGCTTCAAGTGGCCAGAGCCCCAGGCCCTGCCGGAGGACATGCAGGCTGTGCTCACCTTCAACGGCATCAAGTGGTCCCACGAGTACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCTGGCTCCGACACCAGTTTGGAGAGCGCTGCACCCCCTGGGCCCCATCTAACCAGCCCCTAGCTCCCATTTCCATCATGACTCCCATTTCCCTCATCCTCCCCACCCCAGTGGAACAGCCCCTCAAACTGGCCTCCCTGGGCTGAGGCAGCCTAGGCTCTTCTCAGGAAATAGCTAACTCCCCTGCCCTCATGGTCCACCTCAAACCCAACATCCTCAGTATCTGCAAAGAGAAGGGAAGCCAGGCATTGGGGGTGCTAAGACCTCCCCCAGGCCCTTGCCCTCTGTTCCTGTCTTGAGTGTGGAAGGGTCACTGCTCAGCTCTGAGGAGGTTCTGGAGGAGGAGGGTTTTCTGTGTGTTAAGCTTTCCTGCCCTGCCAACAGCCAGCTTGAGTAGAGTGAAGGCAGGCAAACTCCAGCAGGGGTTGGTGCCATGGCCACCCCTCTCCGTCAAGCAAGGGCTTGGGCCTGAGAGCCAGCCAGGGACGAGAGGCCAGCCATGGTCTCCATTGAGGGTGCACCTGGCCCCTGCACTCACCACTTCCTACCGCCCTGTGGCCTTGCCTCATAGCCACTCAGTGCCCGTAGCTAGCCTGGCCTGACCCCAGGTTCTCTCCCAGCCTTCCTGATGTGCAGCCTCCTTTGCCACACCTGGGGTCAGGGTGATGGCGAGCCGGCCCTCACTCAGGCTGGTCAGCAGCTGCAGCCTGTGCTCACGGGTGCAAAGGCAGCTCCTGCTTAGGCCTGAGCAGGGGAGGCTGTGTCTCAGAGTGCAGCTAGCCAACCTATTATGCCTTGGTGCTGTGTGCCAGGCCTCTGCCCAGCCTGGCTCAGCCCCCCATCCACCCACCAAAGGCTGCTCACCACCCACTGACTCAGGGAGGTGGAGCGAGGCAGCCCCATGGGGCAGCAGAAGTAGCCTGGGCAGAACCTGTAGCTCCCCAAGGTGTGAACCCATTGCCCTCTGGGAGGGGAGGGGCAAAGCCGGTGAGGAGAAGCAAGATCCTGAAGAGGGGGATGGGATGCACCTGAATCACAGGAGGATTTTGTTAAAATTCCATTCAGGACACCTGGGGTGGGGCCCGAGTTCCTGCATTCCTCATGAACTCCTGGGTAGGCTAAAGCTGGTGACCAAGGAATGACATTCAGTACCTTAGGCAGCCAGGCTCTAAGGCCTCACAGATGTTGGTCATTTCCCTGACACTTCACCCCCTGGCCTATAATCACCAGAGCAACCTTACCTGGTATCATCTCCGTCTGACAGAGAAGGACCTGAATGACGTGCCCAGTGTCCCAAGTCACTAGAGATAGCCCCAGGACGCAGACCGGGCCTCCTGGCGCCCCGTCCATGGCCAGGGGCACTGCTCCCTTGAGAATTATCCAGGAGGCTGCACCCCAGGCAGGGCTGTTGCTCTACAGAACGGCCAGCTTCCCTCTTGCCCCCCAGGACTCTAGCCATGGGGGACAGGCTTTCACAACAGACGGCTGACCCAGAGGCTATAAAGAAATAACTCAGCAGAAGTGTTCCTCGGTCCTTCTCTCCGCCAGGGGTAGAGAGCATCTCCTGCCAATAAATGCAGGCTCCAGCTAATGGGCTCGGCAGGCACCAGCCCAGCCCCTCCCCTCCCAGGGGCAGTGGGTTCACAGCTGGCTTAGGTCCCAGAGCTGCCTCCCACGGATGCAAGCCAGGCCCCCTTGGAGCTCCCCAGCCACATCTATACAAAGTCAAAGGTCTTGCTTCAGGCTTGGAACTCCTTCCTTCCACTCCCTTCCCTGCCAGATACACTAGCCAGTCCTCTGGGTGCCCTTGACCCTTTCTCCTTCATGCTTCATGAACGCCCACCAGTGTCAGGCCCTGGACAGGACAGCGGATGTTGCCCCCAAGAGCAGAGGCAGTAACAATATAATGTGACAAGTCTCCTCCAGAGAAGGCCTTGTCTTCTTGTTCCCCATCAGTCCCACTCCCTCCAGAGGCCCCTCACCGGCAGTACTCGGAGAAGTTGCCCAGCACACCCTCCACTGCCTGCCTCCTCTCTCTGGGGAATCAGAGCCCAGCCTCCAGGCCCTGCTGGAGCAGCTGAAATAAAAACCCTCACCAGTGCATTCAGGGGCCTGCCTCCCTCGCCATAACCAACCACTGCCCCGATTGCAGCCAGGGCAGGCACCTTGGCCCTCACTGTCCACCTAGGCCTGGCCTCACAGAGCCTCTTCTGAGACAGAGGGCTGAGAAACAGCCTTCCCCCCAACCCCCAGCCTGCTCTGACATTGCTTTGAAAGGGTCAGAGTTTTTTGCTTAGATGGGCTGTAACTGCTGCCCCCACTATGGGGCTGAGTCAGCTTCACCCCATCCCAGCCCTCTCCGAGACCAAGACCTTGCTCATGAC EMBV3_20476 TTTGGGCAGCTCCTGGAATGTGGACTCTGAGTTCTGAAAATTAGAGCGTCTTCCCACTGG Gene BVT0102_262747 - 1 EMBV3_30919 GK000016.2:43819938-43848338 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08805 CAACTCCCCACCTGTGGTTCAGAGAGAGCGTTACTGGGGAAGAACGGCTGAGAAAAAGAT Gene BVV0102_135451 + 0 NULL GK000018.2:43325360-43336311 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083280 1 XLOC_051220 Coding TCONS_00083280 XLOC_051220 Coding Coding RGS9BP 18:43324438-43327987 o TSS62623 3549 1 TCONS_00083280_3 237 1 0 0 0 0 4.67970791241357e-06 0 0 0 0 5.4283612495519e-06 0.000348960934160651 0.00041838109915006 8.85119464882342e-05 0.000352495706899758 0.000705134817171958 0.000238247794509105 0.000416750744946756 0 0.0001767463354581 0 0 0 6.27275138152636e-06 0 8.03040326463964e-05 0 0 0 0.000276057382853187 0.000123109179794334 0.000189735965976418 XM_005218904.1 RGS9BP PREDICTED: Bos taurus regulator of G protein signaling 9 binding protein (RGS9BP), transcript variant X1, mRNA. 0.0 2477 100.00 0.386587771203156 NM_207391.2 RGS9BP Homo sapiens regulator of G protein signaling 9 binding protein (RGS9BP), mRNA. 0.0 1099 77.60 0.404339250493097 TCONS_00083280_3 sp|Q8MJG0|R9BP_BOVIN R9BP_BOVIN Regulator of G-protein signaling 9-binding protein; 5e-170 473 100.00 0.9957805907173 1 coding 0 0 0 0 0.0366428030127031 0.827486279799315 -0.00560498633824111 0.919234192318443 AGGATGGATGAGGGAATGGCAAACCCGGTCAGCGGAAGCGCATGTTGTGGACCCTGAGCAGCGGTAGCGCCAAGCTCCTCTCAGGCCATGAGGAGTGCTCGGACCGTCCGGCCGGGGAACGCCGTCGAGGCTGGCTGCATCCTGCTGCGCTGAGTGGGTGAAGGTGAGAGGGGCGCAGGCGGCCGGGGTGCGCGGGAGAGCAGCGCCATGGCGAAGGAGGAGTGCAAAGCGCTACTGGACGCGCTTAATAAGGCGACCGCATGCTACCATCACCTGGTGCTGACCATCGGCGGCTCCGCAGACTCGCAGAACCTGCGAGAGGAGCTGCAGAAGACGCGCCAGAAGGCGCAAGAGCTGGCGGTGGCCATCCGCCTCCGGCTGACAGCCCCGCTGCGCGACCGGAGCCTGGGCGCCGAGGAGCGCGCCGAATTCGAGCGCCTCTGGGTGGCCTTCTCCGGCTGCCTGGACCTGTTGGAAGCCGACATGCGGCGTGCACTGGCCCTGAGCACTGAGTTTCCGCTGCAGGAGCCGCGGCGGCCACTGGTGCGCACGGGGGTGGAAGGCGGCGCGACCGGCGTAGCGGCGCGCGCCCTGAGCGTCCGCAGCCTGCGGCACGAGGCGCATCGCGACTTCGACGTGGAAGACCTGCACCAGCTGGAGCGGGAGATCCTTCAGGTGGGCGAAATGATCCAGGATATGGAGATGAAGGTCAACGTGCCCCGCTGGACGGTGCAGGCCCGGCAGGCGGCAGGTGCCGAGCTCCTGTCCAGCGCCAGTGCCGGCGTCTCCTCGGTGGGCGGCGTGTCGGTAGAACAGCGCACTGGGCCCTGCGACCTGAGCAAGGCCAAGGCCGCCACCATCTTCAGCGCCGTGCTGCTGGCGGCTGTGGCCTTGGCGGTGTGCGTGGCGAAGCTGAGCTGACCCGTACCTGACGGGCCCCCGCCTCCACCAACCCCTCTCGGGAGACACCCCTGGAGAACGTCTGCAACCGCCTGGACTAGGGATGGGAATGGGATCTGGCATGTTTAAGGGGAGCGGTTCTAAAGCACAGTGTGTGTAACGTGTATGTTTGTACGCGTGTTTCAAGCACACATCTGCCTGGGCAGAACGTGGCTTCCCTCTTGCTGGCCCGGGAGGAGTTAATTTTGCGCGGGCCACCAGGGCATTATCGCTAATGTATGCAAGAGCTTTATCCCCTATTAATAGAAAACCGTTCTCGGTGACCTGAGATTCCTCCCAGTTAATACGTTACCGCCTGTGCTGCTGGGGCGTGTTTACACTGAGGCTGAGCTTGGTGCCCCAGCCCCTGCGGGTGATTCCCATTCTCGGAGAGAGGCAGTTTGGAAAGAGGATGGGGTGAAATGAAGTGTGAGGTGAGGGCTATGTTTTGTGTTTGTGTGTGTTGGTTTTGTTTCGTGGAACAAGAAAGCAAATGGTAATGAGATGTGAGCAGTTTTATAATCTTCATCCTTTGGGGCCTAAGCGTAGGAGAGTGTGCGTTCTTATAGGGAGGATTACACACTTCTGCACCTGCTTGCCCACTGAAAATGACTCCCTGGGTGGGACACAAGCTTTGGGAAGGGGCGCAGTCTATCCATACAAGCACTTTCTCCTTGACTGGGGCTTATTTTTGTTCCAGAACTAGACCAGAGTTTTTGATCCTCCTTTGGGGGAGGGCTGGGGAATCCTCTTTGGAGCCCTTAATCCTAACTATCCCTTGGAATTTGCTTGCTAGCCAGTAGGAGACCTGGCTTTGGAGGGAGTTGCACAACTCCCTGACCTGGACACCCCCTGAGAGGGTCAAGTGACATCACTGGGCACAGAGGTTTTGAGCCAATCAGCCCTGAGACTGGGTTAGAACGTAACAGCTTTAACTCCAAAGTTAAGGAGCTTTTTTAAAAAAAAAACTTCCGTTTAAAAAAATCGTATGACCACATTGTGTACTATCAAAGCTGATTTTTTGTAAAAGACATTTGGCCACGAATTCATACAGTTGCCAATGAATCGTTACATGATGTCTTTACTTAAATATTTAGATTGCTAAACAAACATCTCCATTTATTTTGAAAATCTGTCTTCTTAAGGCAGGAGATCATAGCATAAACTACTGGAACCACAGGTGTAGATGACAGAAGTTAAGTGGCCCTAGCCTCTTTGTGGCAATAAATAAGGAAATGTGGAAAACACACTAGGTCCCAGGCTGGAATTTGCCTGAGCGGTGCCACCAACTCCCCACCTGTGGTTCAGAGAGAGCGTTACTGGGGAAGAACGGCTGAGAAAAAAGATGCATTTAACTCTATAGATAATTTGGAATAAAACCCAGAGACTGATTTGGCTGAAAAGTGAAAAGAATTTTTTTTCTCTCTCTCTTTTTCACCCCGGAAGGGAGAAAGGGGACCAGGGGGAGGGAATGGGTAGTGTTTCACAGGGCAGTTTGAAGGGCCAAGGGTCAAAAGTAAATATCAGTCCCAAGAGCTCAGTCCTACGGACCACCCTCCCAGCCTCGCTCACCCAGTCCCACTCCTCAACACACAGATAGTTAAACCACAGGACCTGTTTGTGTGTTTCTGTGATAATGATTTTAAAAGATCCACAAAATCTTAAGCTGATTAAGAGTTCTGCAACAATAACTAATAAAAGGAACTCCTTCTGCTTCATCCAGTCTGGGTGAATCTAAATTGGGCCATGTCAATTTCTTTTTACACCTGCCTTCCCAGGATAACTTCAGAAATGACATAGGAAGTTTTCTAACTCCCCTCTTTCTCATCCACCTGGGATAAAGCATGGACTCTGTCACCTCATGTCTCTCAGGCTGGGGCATATTGTGACCCAGTTTTGGAAAATATCCCTAAAAACCAAGCCCTAAATATATTCTTTGATCTATAAAATTGTGACTCTTTGTTCTTTTGAAGGTGTTTTTGTTCATGATTCATCAGAATCTGTTATAGAAACAGCCCATTAGAAGCTGTGTAGTCATCACTTCTCAGCCTTTTGGCTAAGATCAAGTGTAGAAGTTGTGTAATCCATAGAGGGCAATTGGAACAAGCGAATGTCTTTATTTTCACTCTTTGCATCCACTTGACAGATCCTTGAGTATTTACTTACACGTGCAATCAGATGTGTACCTGGTTCTGAGAATCCACTGCTCCCTGAAATCAGTGATAAAGTACTGTACACACACCGAAAAAGCTGAATTAGAATGAAGGTATTTATCCTGTGGCTCTGTTAACCTAAACACCTCTTTGTTAAATATTCATAATATTTGGCATTATTTGGGGTTATAACATTGCCTAATAGAACTTTTTGCTCTGTGATGAGAGCAAAATCACCTTCTGCTTGAGCAATAGGCTGCTCTATAACAATATCTCCCTGATCTCATTTCTCTGTATCATTCAAGAGGTTGTTTTCTGGTAGAAGCCTGATTTAATTTAGAGGTTGGATATCAAAGTCATTAATTTTCTTAAAACATTTGGTATGATCTTATACCATGATACAAGTGATTAAAAAATTACAAATATTTAATAAAGTGTATATAGGGTATAGTCAGTG TCONS_00083281 s 5' 0 TCONS_00083281 s 5' 0 EMBV3_22342 TATTGCTGGTGACATGCCCAGAGATGACCCACTGAGCCCTTATACCCCAGAATTAGCGCT Gene GeneID:281839|ICAM1:NM_174348:282_cdna Constitutive 0 NULL GeneID:281839 7 GENE ICAM1 NULL intercellular adhesion molecule 1 EMBV3_42614 GTTCTGCTAGAGGAAGTTGCAGCCACCCTCCAGGAACTGTATTTAGACCAGTGTGGGATC Gene GeneID:528132|LOC528132:XM_002694086:335_cdna Constitutive 0 NULL GeneID:528132 16 GENE LOC528132 NULL similar to PRAME family member 8 EMBV3_32988 GACACGTATAGATTGGAGTTTCTGGTCACTGCCAACAGTGGTTTCATCTCCATGGGCACC Gene GeneID:521749|LOC521749:XM_002690719:389_cdna Constitutive 0 NULL GeneID:521749 10 GENE LOC521749 NULL similar to olfactory receptor 1317 EMBV3_28959 ATCATACAGAGCTCATCTAAGCACAACTACTGGTCTTTTCCATCATTTCCCATGTGTGGC Gene GeneID:282043|RPE65:NM_174453:7_cdna UTR3_Alt 2 NULL GeneID:282043 3 GENE RPE65 NULL retinal pigment epithelium-specific protein 65kDa EMBV3_42959 ATATTAAGCGTCTCCTTGATTCCTTTGGTAACCACCCTGGCTGAACCACACCTTCCACCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11482 ACACAGAGGAGGAAATTGAGATGCCTGACCCTGAAGAACATCCGTTGGACTCTGAACCTG Gene GeneID:100336759|LOC100336759:XM_002695374:7_cdna Constitutive 0 NULL GeneID:100336759 18 GENE LOC100336759 NULL solute carrier family 7 (cationic amino acid transporter, y+ system), member 3-like EMBV3_16523 GATGGAAGACCAATTCAGATGAGGATAGGCATTCACTCAGGCTCTGTGCTGGCTGGAGTT Gene GeneID:613600|GUCY1A2:XM_002692952:49_cdna Constitutive 0 NULL GeneID:613600 15 GENE GUCY1A2 NULL guanylate cyclase 1, soluble, alpha 2 EMBV3_39617 GAGAAGGAACCCCCAACGACACTACTCTGGGTTCAGTACTTCCTGGCACAGCACTTTGAT Gene BVV0102_229128 + 0 NULL GK000012.2:11541362-11625777 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034506 TCONS_00034500 TCONS_00034501 TCONS_00034505 TCONS_00034497 1 XLOC_020698 Coding TCONS_00034501 XLOC_020698 Coding Coding NAA16 12:11509856-11568289 j TSS25480 2093 1 TCONS_00034501_3 573 15 0.964437294633078 2.36950771895316e-14 0.000191506966646745 9.21322165309792e-52 2.48405219924399e-05 0.000507013570783895 4.44561166928937e-05 4.25739527511603e-05 3.28351175722814e-69 3.02111670356929e-05 2.79786679547203e-13 8.09366607286855e-05 1.57688509332132e-16 2.10540133145068e-05 5.71717154600496e-20 7.51093837837067e-15 1.51121241345316e-17 2.2550549732836e-15 0.000810546749531468 0.000152281817921642 0.000107538464307297 5.19344542584997e-07 9.21207016137079e-05 1.84991344223935e-05 6.73872298574758e-126 1.06575188578735e-13 0.00016210867926245 8.91255421233833e-05 9.37643987222602e-05 7.74881025762417e-33 2.71673112806727e-05 NM_001103100.1 NAA16 Bos taurus N(alpha)-acetyltransferase 16, NatA auxiliary subunit (NAA16), mRNA. 0.0 1645 99.78 0.437649307214525 NM_024561.4 NAA16 Homo sapiens N(alpha)-acetyltransferase 16, NatA auxiliary subunit (NAA16), transcript variant 1, mRNA. 0.0 1682 91.68 0.56043956043956 TCONS_00034501_3 sp|Q6N069|NAA16_HUMAN NAA16_HUMAN N-alpha-acetyltransferase 16, NatA auxiliary subunit; 0.0 856 71.57 0.965095986038394 12 coding 0 0 0 0 0.0239546905281044 0.871711386436975 -0.0190373317597936 0.706858626789299 CTCGCGCCGCGGGTCCCAGGCTTGGGCTTGCGGCCGCGGCTTTCTGTCCAGACCGTCTTCCTCTTTCCTCTGTCAGCCCCGGCCAACGGCCCTGCCCGGCCCGCCCAGCCCCAGCTCTCGGCCAATGAGCTGATCCGGGGCTCGCAGCCCGACTCTCAGCCGCGGCTTGCCCTGGTGCCTGTCCCGCAAGGCTGTGCGCGGGGGGCACCCAGCCTGCCCCGCCGGCCGCCATGCCCAACGTGCAGCTGCCACCCAAGGAGAACAACCTCTTCAAACGCATCTTGAAATGTTATGAACAGAAGCAATACAAAAATGGCCTCAAATTTTGCAAGATGATTCTTTCAAATCCGAAATTTGCTGAACATGGAGAGACTTTGGCTATGAAAGGATTAACATTGAACTGTTTAGGAAAAAAAGAAGAAGCATATGAATTCGTTCGTAAAGGACTCCGTAACAATGTGAAGAGTCATGTCTGTTGGCATGTATATGGACTCTTGCAGCGTTCTGATAAGAGATATGATGAAGCTATTAAATGTTACAGAAATGCCCTCAAGTTAGATAAAGATAATCTGCAAATTTTGAGGGATCTCTCTCTGTTGCAGATCCAAATGAGAGACCTTGAAGGTTATCGAGAGACAAGATATCAGCTTCTTCAGTTGCGCCCGACACAACGTGCTTCCTGGATTGGCTATGCCGTGGCACACCATCTACTGAAAGACTATGAGATGGCACTGAAACTGCTCGAAGAATTTAGACAGACTCAGCAAGTTCCTCCCAGCAAAATAGACTATGAATACAGTGAACTGATACTGTACCAGAATCAAGTGATGAGGGAGGCAGATCTGTTTCAGGAATCTTTGGAACATATAGAAACATATGAGAAACAAATATGTGATAAACTTTTGGTGGAAGAAATTAAAGGTGAAAAATTTAGAGAACTAATGGATAAGTTCCTGAGGGTTAACTTCAGTAAAGGCTGCCCGCCCTTGTTTACTACTTTGAAATCTCTGTATTACAATACAGAAAAGATTTCCATAATCCAGGAGCTGGTTACTAATTATGAAACCTCTCTTAAAACGTGTGACTTTTTTAGCCCTTATGAGAATGGGGAGAAGGAACCCCCAACGACACTACTCTGGGTTCAGTACTTCCTGGCACAGCACTTTGATAAGCTTGGGCAGTATTCTTTGGCTTTGGATTATATTAATGCTGCAATTGCTAGCACTCCAACTCTAATAGAATTATTCTATATGAAAGCAAAAATTTACAAGCATATGGGTAATCTCAGAGAAGCTGTCAAGTGGATGGATGAAGCTCAGTCTTTGGATACGGCTGATAGATTCATCAATTCCAAATGCGCAAAGTATATGCTTCGGGCAAATATGATAAAGGAAGCAGAGGAAATGTGCTCCAAGTTCACAAGAGAAGGGACGTCTGCCATGGAGAACCTAAATGAGATGCAGTGCATGTGGTTTCAGACAGAGTGCATCTCCGCGTACCAGCGCCTGGGGAGGTACGGGGACGCTTTGAAAAAGTGCCATGAAGTAGAAAGGCACTTCTCTGAGATAACTGACGATCAGTTTGACTTCCATACTTACTGCATGAGAAGGATGACCCTTCGGGCCTACGTTGACCTTTTGAGATTAGAAGATATACTCAGGAGACATGGATTTTATTTCAAGGCTGCTAGATCAGCTATTGAAATATACTTGAAACTGTATGATAATCCCTTGACCAGTGAAAGCAAACAACAAGAGAGAAATTCAGAAAACCTATCAGCCAAAGAATTGAAGAAAATGCTTAGCAAGCAGAGAAGAGCTGAGAAAAAGGCTAAAGTAGAAGAAGTGAGAAAGCATGTGGAAAGGGAACATCAACCAAAAAATCAAAAGAAAAACGGGATGAAGAAGAAGAAACCAGTGGTTTCAAAGAAGAACTTCTACCTGAAAAATTAGAAAGGATAGAAAATCCATTAGAAGAAGCTATCAAGTTTCTTATACCTCTTAAGAACCTTGTTGCTGATAACATTGACACTCATCTGTTAGCATTTGAAATATATTTTAGAAAAGGAAAGTTTCTGTTAATGCTGCAGTCTG EMBV3_09067 TGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGG Gene BVT0102_078876 + 1 EMBV3_23662 GK000009.2:3163482-3673463 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00063037 TCONS_00152753 TCONS_00230737 TCONS_00207277 TCONS_00218448 TCONS_00152743 TCONS_00210177 TCONS_00117964 TCONS_00186108 TCONS_00232348 TCONS_00110373 TCONS_00252934 TCONS_00109859 TCONS_00251760 TCONS_00124583 TCONS_00009883 TCONS_00199544 TCONS_00218891 TCONS_00175545 TCONS_00040583 TCONS_00011804 TCONS_00161191 TCONS_00208127 TCONS_00021596 TCONS_00251524 TCONS_00234064 TCONS_00011198 TCONS_00066192 TCONS_00189806 TCONS_00089951 TCONS_00206861 TCONS_00152647 TCONS_00130259 TCONS_00007555 TCONS_00062743 TCONS_00218881 TCONS_00063180 TCONS_00030202 TCONS_00111546 TCONS_00153219 TCONS_00185807 TCONS_00080733 TCONS_00252056 TCONS_00007501 TCONS_00124845 TCONS_00176254 TCONS_00107446 TCONS_00199062 TCONS_00209870 TCONS_00006827 TCONS_00047865 TCONS_00022065 TCONS_00142489 TCONS_00218865 TCONS_00197184 TCONS_00249012 TCONS_00117619 TCONS_00031911 TCONS_00119942 TCONS_00071185 TCONS_00066285 TCONS_00222115 TCONS_00129415 TCONS_00040860 TCONS_00233344 TCONS_00188225 TCONS_00221977 TCONS_00250938 TCONS_00251546 TCONS_00010780 TCONS_00046756 TCONS_00223365 TCONS_00249570 TCONS_00209529 TCONS_00218178 TCONS_00010588 TCONS_00222010 TCONS_00156845 TCONS_00117592 TCONS_00007432 TCONS_00251705 TCONS_00115687 TCONS_00109028 TCONS_00030297 TCONS_00165813 TCONS_00209829 TCONS_00161792 TCONS_00153777 TCONS_00007360 TCONS_00023615 TCONS_00252354 TCONS_00148453 TCONS_00135547 TCONS_00009945 TCONS_00251930 TCONS_00073576 TCONS_00040195 TCONS_00218856 TCONS_00123618 TCONS_00238420 TCONS_00039853 TCONS_00030295 TCONS_00187688 TCONS_00251846 TCONS_00177280 TCONS_00091651 TCONS_00148279 TCONS_00110387 TCONS_00231613 TCONS_00187057 TCONS_00229751 TCONS_00039908 TCONS_00245928 TCONS_00080765 TCONS_00070957 TCONS_00088087 TCONS_00056728 TCONS_00110644 TCONS_00206426 TCONS_00037933 TCONS_00006026 TCONS_00231487 TCONS_00249137 TCONS_00251627 TCONS_00179810 TCONS_00066279 TCONS_00219970 TCONS_00116955 TCONS_00007719 TCONS_00056819 TCONS_00238326 TCONS_00038667 TCONS_00019198 TCONS_00156732 TCONS_00040745 TCONS_00040178 TCONS_00201770 TCONS_00107582 TCONS_00185942 TCONS_00056147 TCONS_00088288 TCONS_00239418 TCONS_00190322 TCONS_00116101 TCONS_00010472 TCONS_00070840 TCONS_00071861 TCONS_00030941 TCONS_00123170 TCONS_00176255 TCONS_00124110 TCONS_00040698 152 XLOC_155966 XLOC_037764 XLOC_092518 XLOC_140227 XLOC_125795 XLOC_131768 XLOC_092508 XLOC_128687 XLOC_072130 XLOC_112161 XLOC_141833 XLOC_066277 XLOC_155875 XLOC_065763 XLOC_154701 XLOC_076127 XLOC_005436 XLOC_121197 XLOC_132210 XLOC_105326 XLOC_024399 XLOC_007354 XLOC_098083 XLOC_126640 XLOC_012269 XLOC_154465 XLOC_143543 XLOC_006749 XLOC_040909 XLOC_115843 XLOC_054732 XLOC_125381 XLOC_092412 XLOC_078970 XLOC_003116 XLOC_037470 XLOC_132200 XLOC_037907 XLOC_016457 XLOC_067446 XLOC_092984 XLOC_111860 XLOC_049617 XLOC_154997 XLOC_003062 XLOC_076388 XLOC_106033 XLOC_063356 XLOC_120715 XLOC_128381 XLOC_002389 XLOC_027997 XLOC_012736 XLOC_086914 XLOC_132184 XLOC_118846 XLOC_151955 XLOC_071785 XLOC_018156 XLOC_073015 XLOC_042957 XLOC_040999 XLOC_135424 XLOC_078128 XLOC_024674 XLOC_142826 XLOC_114268 XLOC_135286 XLOC_153881 XLOC_154487 XLOC_006331 XLOC_026895 XLOC_136665 XLOC_152513 XLOC_128040 XLOC_131641 XLOC_006139 XLOC_135319 XLOC_095305 XLOC_071758 XLOC_002993 XLOC_154646 XLOC_069856 XLOC_064933 XLOC_016551 XLOC_100653 XLOC_128340 XLOC_098677 XLOC_093539 XLOC_002921 XLOC_014282 XLOC_155295 XLOC_090333 XLOC_081770 XLOC_005497 XLOC_154871 XLOC_045340 XLOC_024012 XLOC_132175 XLOC_075170 XLOC_145087 XLOC_023670 XLOC_016549 XLOC_113733 XLOC_154787 XLOC_107054 XLOC_056424 XLOC_090161 XLOC_066291 XLOC_141101 XLOC_113105 XLOC_139245 XLOC_023725 XLOC_150855 XLOC_049649 XLOC_042734 XLOC_052874 XLOC_034531 XLOC_066546 XLOC_124948 XLOC_021762 XLOC_001589 XLOC_140976 XLOC_152080 XLOC_154568 XLOC_109580 XLOC_040993 XLOC_133287 XLOC_071121 XLOC_003279 XLOC_034622 XLOC_144993 XLOC_022490 XLOC_009878 XLOC_095192 XLOC_024559 XLOC_023995 XLOC_123415 XLOC_063492 XLOC_111995 XLOC_033950 XLOC_053075 XLOC_146084 XLOC_116357 XLOC_070270 XLOC_006023 XLOC_042617 XLOC_043631 XLOC_017192 XLOC_074724 XLOC_075662 XLOC_024514 Coding TCONS_00223365 XLOC_136665 NonCoding NonCoding - 7:99197616-99198194 - TSS167363 578 1 TCONS_00223365_1 46 0.998269896193772 1 0 0.000120648814424882 6.20409940898881e-05 5.51405551987913e-05 7.67844353482926e-05 2.53681650352793e-05 0.000349004910194905 6.67386467464298e-05 9.48956839952509e-05 0.000136259884344415 0.000309839721293351 0.000106745086248943 9.34329214631254e-05 5.07325207223975e-05 7.83485220371222e-05 0.000264162962598948 0.00439530801700214 0.00120968757694069 0.0042704637380745 3.04795312933588e-05 4.11579086485804e-05 7.71600047162288e-06 0.00131452670583257 0.00344702967144713 0.00588780578812554 6.32849547407575e-05 8.55096297502652e-05 7.47435494178299e-05 0.000452121394965465 0.000429115516678603 0.00059472107130323 XM_001250798.4 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant 2, mRNA. 2e-13 80.6 94.23 0.0882352941176471 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 ACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATGGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATTGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATGGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAG TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 EMBV3_25266 TGACCAGCATATTCAGGTTGAAATGAAGCTTGCAGCCACTGTTGGTACACATCTGTGTGC Gene BVV0101_064052 - 1 EMBV3_08011 GK000023.2:26354824-26518729 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10112 TCAGGATGGAAAGCATAAAGCAGGTTACGCCCTGGTGACTGCTGAACAGGTTTTGGAAGC Gene BVT0102_185659 + 0 NULL GK000030.2:35094298-35299888 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00176419 TCONS_00118459 TCONS_00220566 TCONS_00063194 TCONS_00107436 TCONS_00118040 TCONS_00238581 TCONS_00210913 TCONS_00170890 TCONS_00023655 TCONS_00147537 TCONS_00174806 TCONS_00188145 TCONS_00222867 TCONS_00253647 TCONS_00253740 TCONS_00252081 TCONS_00125692 TCONS_00166886 TCONS_00148960 TCONS_00250203 TCONS_00223765 TCONS_00031886 TCONS_00002600 TCONS_00123823 TCONS_00246739 TCONS_00031759 TCONS_00000529 TCONS_00250582 TCONS_00170891 TCONS_00251851 TCONS_00103962 31 XLOC_106197 XLOC_072622 XLOC_133883 XLOC_037921 XLOC_063346 XLOC_072206 XLOC_145248 XLOC_129423 XLOC_103679 XLOC_014322 XLOC_089424 XLOC_104695 XLOC_114188 XLOC_136174 XLOC_156586 XLOC_156679 XLOC_155022 XLOC_077234 XLOC_101722 XLOC_090838 XLOC_153146 XLOC_137064 XLOC_018131 XLOC_000643 XLOC_075375 XLOC_151107 XLOC_018004 XLOC_000141 XLOC_153525 XLOC_154792 XLOC_062257 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_26388 GACGGAAGGCATCTTCAGAGTACCTGGGGACATCGATGAAGTGAATGCCCTGAAGCTACA Gene GeneID:532363|LOC532363:XM_002692540:151_cdna Constitutive 0 NULL GeneID:532363 14 GENE LOC532363 NULL similar to KIAA1688 protein EMBV3_01673 CTCTGGGCCTCAGTTTCCTAGTCTGTAAAAATGGGTAACATACTGCACTTCCCCCAGCTG Gene BVT0102_281561 + 0 NULL GK000025.2:9680638-9683201 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25070 TCTGCCTAGGGCTATTTCCTCTCCTCTGCCCACCAACAAGTCCTGCTCAATGCCCCCCAT Variant GeneID:510037|RNF122:NM_001101920:27_cdna 87^432 1 EMBV3_18686 GeneID:510037 27 GENE RNF122 MGC166001 ring finger protein 122 EMBV3_10432 GGTGGCTCGTGTCTGGGCAGTAGGCGTCTCAGGCTGGGTCAGAGGCTAAACGCAGGTTCT Gene GeneID:100336552|LOC100336552:XM_002691700:47_cdna Constitutive 0 NULL GeneID:100336552 11 GENE LOC100336552 NULL hypothetical protein LOC100336552 EMBV3_07121 GTATGTGCATGTCAGTGTTCTTGGGGTGTGTGGGGGCGGGGAGTTTAGGGTCAGCAGCTT Gene BVT0102_318250 + 0 NULL GK000007.2:39433136-39447680 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38056 CAGGTTGAGAAGCTGATTGCGGTTTCTTAGGAATGTAGAACATCTGGCCCTTCGAACCTA Gene GeneID:614347|ANAPC13:NM_001113234:2_cdna Constitutive 1 NULL GeneID:614347 1 GENE ANAPC13 MGC137060 anaphase promoting complex subunit 13 EMBV3_17832 TTTTTTTCCTCGCGGTGGCGTTTCTCTATCCTTAGATGGGCTCCAGGTGAACCGTTTCTC Gene BVV0102_300580 - 1 EMBV3_11914 GK000030.2:142525374-142639477 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248592 TCONS_00248595 TCONS_00248591 1 XLOC_151641 Coding TCONS_00248591 XLOC_151641 Coding Coding USP9Y X:142510586-142607949 j TSS185881 3115 3 TCONS_00248591_5 281 17 0.968180604342557 1.47734238678979e-10 5.47639710304087e-11 3.22573237732616e-14 1.11494669349122e-15 1.57812129863724e-11 1.05066233367568e-10 3.56167684955756e-16 1.46149759481923e-15 5.66557578226831e-08 7.38406073953454e-10 0.00011104051032129 3.68824502429956e-05 4.78672275834277e-05 1.47984441615243e-10 9.9374894448067e-08 0.00131292609577901 0.000671205310171612 0.000514787185213404 4.3774531029304e-17 1.00304701580179e-08 3.32915428176213e-11 0.000586753801822255 3.21342648153951e-05 0.000452603759447529 3.18008989285521e-12 4.1393986197052e-10 3.64453395207059e-66 8.20932045562734e-05 0.000498662902034912 2.65190093771119e-09 NM_001145509.1 USP9Y Bos taurus ubiquitin specific peptidase 9, Y-linked (USP9Y), mRNA. 0.0 1792 100.00 0.318459069020867 NM_004654.3 USP9Y Homo sapiens ubiquitin specific peptidase 9, Y-linked (USP9Y), 0.0 1452 92.45 0.318459069020867 TCONS_00248591_5 sp|Q93008|USP9X_HUMAN USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X; 0.0 568 98.57 0.98932384341637 0 coding 0 0 0 0 -0.00193278150195019 0.990002900622366 0.01684988881915 0.771407290232997 AGAGGGGGGGCTTCGAGAGGGCGGGGCGGCACGGCGCGGCGTCATATTGGAGGCTCCGACTGGCGCTGAGGCTGGTGGGAGTTTGCGCCGCCGCGGTTGCCGCTGTTCGGCCGTTTTTTTTTTGGCTTGCCGGATCCGCCATATTGAAGAGGGCCGGGGCAGGCGATTTCTGGAGCTCCAGCGTCCCGGTGTCCCGCCCTTAAGGGGTTTTGTGGAACCCAGCCCCATTAAGCGTCACTCAGCTCCCAGGCCTTTCAGGATCTTGACTGCTTGTGTTGCCCTCTCCTTTACGGGAGACTGCCGCCTTAGCGGCTCATTTTAGTGTTGGAGTTGGCAGCTAGGACCGAGTCGGAGTGAAGAGACTAGGCCCTAAAAGGTGAAACCGCAGCTGCGGGAGCATTAAGCGGACGTTAAACAGGAGAAACGGTTCACCTGGAGCCCATCTAAGGATAGAGAAACGCCACCGCGAGGAAAAAAAGAGGTAGTGAAATGGTCTCTTCAAGAATGGTCTGTCCTTGAATTGGAGATATTTGAGGCTGATATATCCTGGTGCTTCGTCTCCTATAAGTGAACTGTAATTTCTTCTCTTACAACAACTAAATAAACAGACAAAATAGCAAAAATCTTTTCTGTTTTGAGTATGACAGCCACTACTCGTGGCTCTCCAGTAGGAGGGAATGACAGCCAGGGCCAGGCTCCTGATGGACAGTCTGAGACCCCCTTCCAGAATCAGACCTCATCACCTGATTCTTCCAATGAGAATTCCCCAGCAACTCCTCCAGATGAACAAGGTCAAGGTGATGCTCCACCTCAACATGAAGATGAGGAACCTGCATTTCCTCATGCTGACCTGGCAAAGTTGGATGACATGATCAACCGGCCTCGTTGGGTGGTTCCAGTTTTGCCAAAAGGGGAATTAGAAGTGCTTTTAGAAGCTGCTATTGATCTTAGTAAAAAAGGTCTTGATGTTAAAAGTGAGGCATGTCAACGTTTTTTCCGAGATGGGCTAACAATATCTTTCACTAAAATTCTTATGGATGAAGCAGTGAGTGGCTGGAAGTTTGAAATTCATAGATGCATTATTAACAATACTCATCGCCTAGTGGAACTTTGTGTGGCCAAGTTGTCCCAAGACTGGTTTCCACTTCTAGAACTTCTCGCCATGGCCTTAAATCCTCATTGCAAATTTCATGTCTACAATGGTACACGTCCTTGTGAATCAGTTTCCACAAGTGCTCAGTCACCTGAAGATGAATTATTCGCTCATTCCTCAGATCCTCGATCACCAAAAGTGTGTTGACCATTTGGACAATGCTATGAGTTTCTCAATCAACATACAGTGAGAAAGTACTTTATTCCAATTATAGAAATAGTTCCACAATTTTTAGAAAATTTAACTGATGAAGAGCTGAAAAAAGAAGCAAAGAATGAAACTAAAAATGATGCCCTTTCAATGATTATTAAGTCTCTGAAGAATTTAGCTTCAAGGATTCCAGACCAAGAAGAAACTGTAAAAAATTTAGAAATTTTTAGGTTGAAAATGATACTCAGATTGTTGCAAATTTCTTCTTTTAATGGGAAGATGAATGCCCTGAATGAAATTAACAAGGTGATTTCTAGTGTATCATATTATACTCATCGGCATGGTAATCCTGAAGAGGAAGAATGGCTGACAGCTGAGAGAATGGCAGAATGGATACAGCAGAACAATATCTTATCCATAGTCTTGCGAGATAGTCTTCATCAACCTCAGTATGTAGAAAAGCTAGAGAAGATTCTTCGTTTTGTGATTAAAGAAAAAGCTCTTACGTTACAAGATCTTGATAATATCTGGGCAGCACAGGCAGGGAAACACGAAGCCATTGTAAAGAATGTACATGACCTTCTGGCAAAGTTGGCTTGGGATTTTTCTGCTGAACAACTTGATCATCTTTTTGATTGCTTTAAGGCAAGTTGGACAAATGCAAGTAAAAAGCAACGTGAAAAGCTGCTAGAGCTGATACGACGTCTTGCAGAAGATGATAAAGATGGTGTGATGGCACACAAAGTGTTGAACCTTCTTTGGAATCTGGCTCATAGTGATGATGTGCCTGTAGACATCATGGACCTAGCTCTCAGTGCCCACATAAAAATACTAGATTATAGTTGTTCCCAGGATCGAGACACACAAAAGATCCAGTGGATAGATCGCTTTATTGAAGAACTTCGCACAAATGACAAATGGGTAATTCCTGCACTGAAACAAATAAGAGAAATTTGTAGTTTGTTTGGGGAAGCACCTCAGAATTTAAGGTCGTAATTCAGAGTAATGATGATATTGCCAGCAGAGCTATAGATCTCCTTAAAGAAATATATACAAATCTTGGCCCCAGATTACAGGTCAATCAGGTGGTTATCCATGAGGACTTTATTCAGTCTTGCTTTGATCGTTTGAAAGCTTCATATGATACATTGTGTGTTTTGGATGGTGACAAAGACAGCATTAACTGTACAAAACAGGAAGCTGTTCGAATGGTTCGAGTATTGACTGTTTTAAGGGAATACATAAATGAATGTGATAGTGATTATCATGAGGAAAGAACAATTCTACCTATGTCAAGAGCATTCCGTGGTAAACATTTGTCTCTCATAGTTCGGTTTCCAAACCATGGCAGACAGGTTGATGATTTAGATATATGGTCTCATACAAATGATACTGTTGGTTCAGTACGACGATGTATTCTCAATCGTATTAAGGCAAATGTAGCCCATACAAAAATTGAACTCTTTGTGGGTGGTGAATTAATAGATTCTGAAGATGACAGAAAGCTAATTGGACAGCTGAACTTAAAAGACAAATCAATAATTACGGCCAAACTTACACAAGTAAGTTGCAATATGCCTTCCAGTCCTGATAGTTCTTCTGATTCCTCAACTGGATCTCCTGGGAACTATTGTAAGCGTTACAGTGATGGCCCTAAACAAGAAGTGGAAAGTTGTTTGCCTGGGGTGATAATGTCACAACATCCCAGGTACATTTCTTTCCTTTGGCAAGTTGCTGACTTAGGTAGCAATCTGAATATACCACCTCTTAGAGATGGAGCCAGAATACTTATGAAACTTATGCCAATGGGTA EMBV3_00725 AGGGGATGTCAGCCGTTTCCCTCCTGCCAGGCAATCTCGCTGCCAATGATCTCTCCACGT Variant GeneID:618779|NSUN4:XM_002686417:372_cdna 458^612 1 EMBV3_35539 GeneID:618779 3 GENE NSUN4 NULL NOP2/Sun domain family, member 4 EMBV3_25785 GGCTCCTGATTACGAGAGAGACAGAATCAGTAGAACAAGCGAAAACCCACATTCCACTTC Gene BVV0102_314415 - 0 NULL GK000008.2:76117638-76122538 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228162 TCONS_00228159 TCONS_00228160 TCONS_00228161 1 XLOC_138444 Coding TCONS_00228159 XLOC_138444 Coding Coding SMU1 8:76118165-76152278 = TSS170186 6353 1 TCONS_00228159_3 513 0.0736659845742169 12 0.814112335834897 0.000378078392083248 1.88673460537094e-07 0.000236980829862926 0.00029656019271973 0.000358288201463301 0.000202021481970086 0.000320117480210557 0.000463300632453882 0.000824464002195325 0.000330474356538517 1.51838450450715e-08 3.2609342758171e-05 5.20657045126925e-05 0.000201535484301281 5.08435029643519e-08 0.00206874562829115 0.00111408630429826 0.000996947551161202 0.000350413542686581 0.000233464233587152 7.88735862973077e-05 0.000931665759333162 0.00130383806232208 0.000588936931089149 0.0003943919549889 0.000242092675368245 0.000244362379994761 0.000429671302763325 2.3400830609533e-10 0.000107686173023499 NM_001038573.1 SMU1 Bos taurus smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (SMU1), mRNA. 0.0 3562 99.95 0.311506374940973 NM_018225.2 SMU1 Homo sapiens smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (SMU1), mRNA. 0.0 2661 89.90 0.30725641429246 TCONS_00228159_3 sp|Q2TBS9|SMU1_BOVIN SMU1_BOVIN WD40 repeat-containing protein SMU1; 0.0 1071 100.00 0.998050682261209 2 coding 0 0 0 0 0.968830809472703 0.0248501810570091 -0.0446864856610698 0.455127286748244 AGTGGGGCCTGCGCCCGGAGAGACAACGCTATGTCGATCGAAATCGAGTCCTCCGATGTGATCCGGCTCATTATGCAGTACCTCAAGGAGAACAGTCTACATCGGGCGCTAGCCACCTTGCAGGAAGAGACGACTGTGTCTCTGAATACAGTGGACAGCATTGAGAGTTTTGTGGCTGACATTAATAGTGGCCATTGGGATACTGTTTTACAGGCTATACAGTCTCTGAAATTGCCAGACAAAACCCTCATTGACCTCTATGAACAGGTTGTTTTGGAATTGATAGAGCTCCGAGAATTGGGTGCTGCCAGATCTCTTCTGAGACAGACTGACCCCATGATCATGTTAAAACAAACACAGCCAGAGCGGTATATTCACCTGGAAAACCTCTTGGCCAGGTCTTATTTCGATCCTCGAGAGGCATACCCCGATGGCAGTAGCAAAGAGAAGAGAAGAGCAGCCATCGCCCAGGCCTTAGCTGGGGAAGTCAGCGTGGTGCCTCCATCTCGTCTCATGGCATTGCTGGGTCAGGCATTGAAGTGGCAGCAGCACCAAGGATTGCTTCCTCCTGGCATGACCATAGATTTGTTCAGAGGCAAAGCAGCTGTCAAAGATGTAGAAGAAGAAAAGTTTCCTACACAGCTGAGCAGGCATATTAAGTTTGGTCAGAAATCACATGTGGAGTGTGCTCGATTTTCTCCAGATGGTCAATATCTGGTTACTGGGTCTGTTGACGGATTCATTGAAGTATGGAACTTTACGACTGGAAAAATCAGAAAGGATCTTAAGTACCAGGCACAGGATAACTTTATGATGATGGATGATGCTGTTCTCTGTATGTGCTTCAGCAGAGATACAGAAATGTTAGCAACTGGTGCCCAAGATGGAAAAATCAAGGTATGGAAGATTCAGAGTGGACAGTGTTTAAGGAGATTTGAAAGGGCACACAGCAAAGGTGTCACCTGTCTAAGCTTCTCTAAGGATAGCAGTCAGATCCTTAGTGCCTCTTTTGACCAGACAATTAGAATTCATGGTTTAAAATCTGGAAAAACCCTGAAGGAATTCCGTGGCCATTCCTCCTTTGTTAATGAAGCCACGTTTACACAGGATGGACATTATATTATCAGTGCATCCTCTGATGGCACTGTAAAGATCTGGAACATGAAGACCACAGAATGTTCAAATACCTTTAAATCCTTGGGCAGCACTGCTGGGACAGACATCACTGTCAACAGTGTGATCCTGCTTCCTAAAAACCCAGAGCACTTTGTGGTTTGCAACAGATCCAACACAGTGGTCATCATGAACATGCAGGGACAGATTGTCAGAAGCTTCAGCTCTGGTAAGAGAGAAGGTGGTGACTTTGTTTGCTGTGCCCTCTCTCCCCGTGGCGAATGGATATACTGTGTAGGGGAGGACTTTGTGCTTTACTGCTTCAGCACAGTCACTGGCAAACTGGAGAGAACTTTGACAGTTCACGAGAAGGATGTGATTGGTATTGCACATCACCCTCATCAGAACCTGATTGCTACTTACAGTGAAGATGGACTGCTAAAGCTCTGGAAACCCTAATTCAGCTTCTCTTTTTAAACTAACTTGAGAGCACGTACTTAAAATGAAGATATTACTCATGTGTTGCTTTTTTTTAAGGCCAGCTTTTCTAAGCAAATCATCTGAATTAGGCACAAGAATAATTTTGTGAAAATTCATGTTTAAGTAGCGGTTACCACTTTTTATATATTTTCAAGGTATTCACTGGGGCAGTCACTTAATGCTGTCAATCATCTTTTACCTGAAGAGCAAAATACTGGTATTCCTAGGGAGAAACTGTACTCCTTTGATTATTTGAAATGCTTTGATTGAAATGGGCTTCCTGCAGTAAAACTTGTAAATTAGGAACTATCCTAAATTCATTAGCTGTTTACTATCCCACCTTTTTTTTTTTTTAAAAGATGTTAATAAATTTTACACCTTTCTGGAGGCTTTGTTTTTAAATGTAAATAAATGCCTATCTAGTTAAGGCATTTACTTAGAATCAGATGAAGAGTGCAGGACACTACATTATCATCCCTGAAGTCAGTTTCCCATAGGATCTCATTTCACTGCCCTCCCCCGGGGCGTTCATTTTTTCTTAATTGCAGGATCCACTATGAGAATTCAGTTTTGGCATATCTCCTTTGTATGCAGAGGAAGGTTTTTGCATTGAAAATGTGCTGTTCAAGAAAAAATAACTAGAAGAGATTTAGGAAACAAACTCTCAGCAGTATTTTGCATATGGGTCTTTTCTGTTTCAACCAATATATGTGGAATGCCTGTTGATGTGTTAAGATAATGTGGGTACCATTTCAAGAAAGTGAGCTTATTTATGGAGGCCTTTTATGCCCCATTTCCCCAGTTATTAGATACAGGTGAATGAGAATTTTGCAGTCTTAAAACCCTTTGTCACTTGAAATACAGTCTGATCTGTATTAAAGATGAGCAATGCCTAGCATGTAAAAATGCTTAATGCTGGCCGAATAATTCTTTAACAGCACTATGAAATCATCTTTCCCAGTTACACTCCCCAAATTTGGTCTTTTTGCCACAAAACCTTAACTTTCTCACAGAATGTCATTTGTGTCATTTTGAGAGTTGAACGATAGCTACATGACTGTAGCCTGCCATACCTCTCAATGAAGAGCAGCTTTCATTTAAGTAAAAGAAGTTTAATGTGGAAAAAAAAGAGCTCATGCAAAAATTCCTTACAAAAATCAAGAAACCAGTTTGATTTAGCCCACAACCTCATGAACTGGCAGTTCAGAGGCTTTCTTTGTGCCAAGGCTCATGGAGAACAAGAATCTATCAGCATGGGTGCACTTAGTTCTACGAATTTTTAGCAAACATCTCTTCTGTTCTTGCATCTAATGCTCAGGATGGTTAGACCAATTTCTGTCACAGGATAGGGGAAAAGAAGCAAGTTAACAGGATTAGTGGTTGATAAGAGGAAATCTGGAGTTTTGATGACTGGGAAGCATTATGCAGATCTAAAGGGTTAGGAAAAGGTTTTCTGGAGTTGACTGTGAAAAGGACCATCAAGAACTCAAGGTAAAGGGCTTTGGTGATCTTAGGGGGAGCCTTTCCAGGCCCTGCAGTGTGCTACAGGTGCAAGGCACGTGCTGCACAAATGGTAAGGTCCGGGGAGACAGGCAGAGAGGAGAGGACTAGTCTACAGGCCTTAAAGTATATTTTCTTAAGGGAGTTAATGCTCATAACTGGGGAGGAAAAATCTGCCTTTCCCAAGTTTTTTCTTCCAGTCCCTTGTTCCTGGTCATCTCCTGCAGTAGAGAAGGCAGGGGGAGCCCTGGGGAGAGGCAGAAGTGGTGGAGAGCTTGGGTCGGGCATGACTGAGCAGTGTGGGAACCAGGAAGGGCTCCTGGACCCTTGCTTGCACCCTACCCCAACCCGGGTTCCTAGAGAGCCACTACAGCCCATGTATTTGACACTCCTCTCTAGCACTGGAAACTCAAAATGCACGTGTGCTTGCTCAGTCGTGCCCAACTTTTAGGGACCCCATGAACCGGGGCCCTAAAGACTCCACGGCATTTTCCAGGCAAGAATATTGGAGCATGTTGCAATTTCCTGTTCCTGAGGATCTTCCTGTCCCAGGGATTGAACCTCCATCACTTGGGTCTCCTGCATTGGTTGGCAGATTCCTCATCACTGCACTACCTGGGAAGCCAGAATTCAAAATATATGGCATTCAAGTTAAGCCCTGCCCCCCAAAACTCCATGAGTTGTTCCATCTCCCACTCAGTTGTTGCATTAATGACTCTGGAAAACATTTAATGACCTAGTACTTCACAGCAGTTATTTTTTTCTGAGTCTTAGGTATAGTTAGGTCTAATTCAGTGTTGTGTTAACCAGTTATTTTTCAGCTTGTATTTCTACCACTAACAGTATTTACTGAGTCCTTCCTATGTGAACAGTGTTGTTTCTCAGAACTGCTTTATGAGCTCCAGCCTATTGAGTCCCATGATACAAGTGAAGAAACAGGTTGACCGTGGTTTTATACTTACTCCTAGGGCTCACACACTTTAAAAAGTGTCATTTTCTTCCATCTTATGGTTTGGATAGAGGCAAAGAGTCCATGGGTGTTTCTCCACATTTGGTTAAGACTTATCTAAACTGAACACAGGCGGTGAGAGGAGTAGAAAGAGACCAAGTACAGCAGTGGGGTTTAGCAAGCACGTACAAACTTGAGAACCAGTAAGTAGACCAGGGGTCCTTTTCATCATCAAGGTATTTCAGTCCTTGTTCTGTTGGTCTTTGAAGGTGGCTGAGATAATCAAGTGAAGTGATACTGTTGCTCAAGCATTTTTTACTCACTGTGCCTTTAGAACCTATGCTTCCTATTCCCACATTATTTCAAAACAGGAAACTACCAGTATGTCAAAGACGGGAAGCTCCCTTAGTCTGGAACAGACTTGGTATAGCAAGGGCTGCCATTCTTTGACCCTCCACACAGCAATTCTACCAATGGTATTACTGTTCTGGTGATTTAATATAACTATATCCCCATGGTGGTGGTGTACGGCCTTGGCTGTATATATGACCATCCTGGTTGCTGAGGCTACACACAGCTCAACTACACCAAAATACCTGAGACACATCATGTTTTGGCCAAGGTTGGGAGCCAGTATTATACACACAAAAAAATCTGATGCTAATTTCACAAGATTTGTCACCACGTTCTAAGACCCTCATGGGACGTAAAATTAGCTTTTTATTCCCTGCAAGTATGAATGGACAGGGGGAGCATCATTAAGGAGGCATTAGGGCTAGGTCCAGGGAGCTACACTTCTGTGAATGCACTATTTCTTTGTTGACCTTGGCTAGAGTTAAAAAAGAACTAACTTTTGGTGTTTTGTTTTTACAGATTACAAACCTGTCAGTTTCTGCCTCTCTAGGTTACTACTAGTTTCTTCTAGTGATGTCTAAAGATATTTTACTGTGGTCAAACAAAAGTAAAAGCTTACTCAACCGTTTTTGAGTATATATATCTCAGTAGCACTAACCTTATTAACTGTTGTGCAACCATTATTGTTTTTAAACTAAGTTTCCATTCCTCCCAGCCCTTGGTAATCTGTGTGCTATGAATTTGCCTAGGTAGTTCATATAAATACGTAAGGCCTTTCTGTTACAAATACATGTATGACACATTTTGTTCATTCACCTGTTAAAACACCAGCATACGGGTCTTTTCCAGTGAGTCGGTTCTTTGCATCAGGTGGCCCAAGTATTGGAGCTTCAGCATCAGTACCTCTAACAATGTTCAGGACTGATGCTGAAGCACCAACAAGGTACAGGGTTCTCATTTCTTCATATTCTCACTTGTTTCCATTTTGGATTACTAGCTACAAAGTGGTATATCTCACCGAATTTTCATGTTATTTCCCTCATGACTAATAAATATTAAAGCCTCATGTAAGGATTTTTGTAATTTTTACAATGTATTTATAAGACAGGTTTATCGCCGAATTTTTTAGACCAATATTTTCCTTTCTGAACACTTGCCTGGCCAGATTAAAAAGAGATAATGCAAGAATGATAGGATGGGGAGAAGCTATCAATTAAGACTGTCAGTATGAGAAGAAACCTGAATGTTTGGGGAATATGCACTTCACCCCAAGTTTTAGTCTCCTCTTTTTAACTCGTGTTGTAAGGGGAAGTTAGGTTGTGGAGTACATGTCCATGTTAGAACTGTTTAAGGCTCCTGATTACGAGAGAGACAGAATCAGTAGAACAAGCAAAAACCCACATTCCACTTCAGTGTGCAAAAATTCTTAAGCCCCCCATCCCATTTGTTGCTCATTACTCATCCCTCCACTTTCACTCTGCACCCTTATTTAGTATTAAACGTCAGAACTATGGTTAAGTAGTACTTTTCTGGTGTTACTCACTTTAGTTAAATGAAACTAGTAATCTTAACTAGTGAAAAGCCAATGCTTTAACCTGGGAAAAAAAAACCTGTGGTGACACACTGGACATGCTTTGTAATCAGTATATTAAAGAGACATTCATACATTTCAAGAATTGCTTAAATTCTGATACCAGATTTAAGCTTGTGAACATATGATTTTAAACATACAATTAAAGCTATTCATCATAATCTGCTATACTACCAACATTAAATTACAGTTACTCTGGAGCATAAGTTAAATGGTTTAAAGTAAGCCTATAACATACCTACAAAAACACCTTCCTATCTCATACATGCAAATTACTTCTCCATGTAAAGGTCTCATCACTCTAACCTCTAAGTTTCCCTGCTCCAGAAGTCACTACTCTAAGGCTTACTGTGGTCCAAAGGTGGG EMBV3_39672 TAGATGTAGACACTAGCCCCGCTAAGGTTGATTAGGACACCCCAGAGAAGGGGCACTGAT Gene BVV0101_056974 + 0 NULL GK000020.2:18423095-18483809 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08061 CTTAACCAAGAAGTTGCAGTTCGTGCACATCAGTTGGGATGGTCCAAGAGAGTTGCCAGG Gene GeneID:516925|COX18:NM_001082437:68_cdna Constitutive 0 NULL GeneID:516925 6 GENE COX18 MGC148973 COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) EMBV3_20965 CAAGAAGAACAAGGATAAAGAGTATTACGTCTGAGCCCAAGATCTGAAAAAGGACCCTTG Gene GeneID:281950|NRXN1:NM_174404:27_cdna Constitutive 0 NULL GeneID:281950 11 GENE NRXN1 NULL neurexin 1 EMBV3_37672 TCACCGTAACTCTGAAGCTCGCCTTGGATACTCGTTTCTGGACATGGATCAACCACCTTG Gene GeneID:529689|ATP11C:XM_002699575:41_cdna Constitutive 0 NULL GeneID:529689 X GENE ATP11C NULL ATPase, class VI, type 11C EMBV3_23257 TAAGGCTACCTTTGTATTCTCTCCTGTACCTCTTGAGCCTTGAACTTTGACTTCTGCAGC Gene GeneID:407102|TJP1:XM_002696650:233_cdna Constitutive 0 NULL GeneID:407102 21 GENE TJP1 zo1 tight junction protein 1 (zona occludens 1) EMBV3_11807 AGTTCTCTTCCACCTGCCCTCCAAGGCGATGCGTCTTCAGTGCACAAGACTAAACCACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15716 GGTGTAAACATCACGTGTCAAGATGAAGCTGATGACCGACCTGAATGTCCCTATGGAGCA Gene GeneID:507989|APLF:NM_001077874:32_cdna UTR3_Alt 2 NULL GeneID:507989 11 GENE APLF MGC152013 aprataxin and PNKP like factor EMBV3_12425 GGGGACCCTGGAAGTGGATTTCCCTCCGCCTCTCTACAGCGATGACTACCTGTCCCAGGA Gene GeneID:100337014|LOC100337014:XM_002688940:148_cdna Constitutive 0 NULL GeneID:100337014 7 GENE LOC100337014 NULL hypothetical protein LOC100337014 EMBV3_13182 GCTGAAGGGCTCATTTTTAACTGGAAGCAGAGTTGGGACCTGGTGCAACAAACACAAAAC Variant GeneID:514596|MTMR14:NM_001100364:104_cdna 920^994 1 EMBV3_40819 GeneID:514596 22 GENE MTMR14 NULL myotubularin related protein 14 EMBV3_23874 AGTGGCCTTGGGGAGAGCAGTGCCGAGAAAGGTGGCCTTAGAGATGCTCTTCACTGGGGA Gene GeneID:617368|ECHDC3:XM_002692051:39_cdna Constitutive 1 NULL GeneID:617368 13 GENE ECHDC3 NULL enoyl Coenzyme A hydratase domain containing 3 EMBV3_22589 CCCAGTGTGCCTGAGAGGTTCAGGAAAAGTAACCTTGGTGGCCTGTTGCTGTCTTTCCTT Gene GeneID:514706|DBNL:NM_001098970:38_cdna Constitutive 2 NULL GeneID:514706 22 GENE DBNL MGC166201 drebrin-like EMBV3_05478 CTTCGGATATATGCCCAGGAGTGGGATTGTCGGATCATGTGATAACTCCATTTTCAGTTT Gene BVV0102_397241 + 1 EMBV3_09628 GK000001.2:113595080-114144238 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34839 GCCCAGTCTGCGGCGTGACGGGCGGCTCAGATGGTCACCATGGGCCAGTGCTACTACAAT Variant GeneID:509748|LPAR2:XM_002688516:78_cdna 64^224 1 EMBV3_21107 GeneID:509748 7 GENE LPAR2 EDG4 lysophosphatidic acid receptor 2 EMBV3_30586 AAGTTGTCCAAGAACTTGCTGCGCATGAAGGAGTTTCATTATAGAAGAGCAGAGTTTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33570 AGGCCGGCAAGGTGGTGAAGGGCAGGGAGCAGCTCCGGCAGAAGGGAGGATTGCTGTAGA Gene GeneID:282700|PNN:NM_174718:20_cdna Constitutive 0 NULL GeneID:282700 8 GENE PNN MGC127754 pinin, desmosome associated protein EMBV3_03385 CGTCTGCACGAGGAGAAGGAGAGCATAACAGCTTCAGGAAAGTCGCTGTCTTTGAGGAGA Gene BVT0102_041688 + 0 NULL GK000028.2:14775601-14904832 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160170 1 XLOC_097600 NonCoding TCONS_00160170 XLOC_097600 NonCoding NonCoding - 28:14641729-14904544 - TSS119861 733 2 TCONS_00160170_2 72 3 0.997222370193369 4.03905316929571e-13 2.20818201462793e-10 7.42554730874919e-05 2.26579419737918e-05 0.00116810726457827 5.32329726262278e-20 0.000438189774200992 0.000116636252162582 1.8538422382082e-28 0 3.11721135052377e-06 0 2.7383174248594e-89 0.000128338524789037 0 0 0 0 0.000201277246601769 0.00011449125208435 7.37095489315508e-21 3.37725862623445e-25 0 0 5.50470337157464e-16 5.54723002618957e-13 4.58214630024966e-14 0 0 0 XM_005226286.1 PHYHIPL PREDICTED: Bos taurus phytanoyl-CoA 2-hydroxylase interacting protein-like (PHYHIPL), transcript variant X1, mRNA. 9e-89 331 100.00 0.248294679399727 0 noncoding CCTCGCGTCTTGGCGCCCGCAACCCCGCGCGTGAGTCGTCGGTCGGTGGAGCGCACGGGAACGGCAGGCGTCAAGGGGGGTCGGGGAGCGCTGGCTTTCTCCCTTCTCTCCTAGTGAGGGCGGTTCGGCGTTCTTTTCCTTCCTCACGGTGTCAGTCGGAACCAGGTTAGCACTGCGGCGTCTGCACGAGGAGAAGGAAAGCATAACAGCTTCAGGAAAATCGCTGTCTTTGAGGAGAGCAGAGAATGAGATGGGAAAAGTCTTCAACTGAATGCTCCCAGCTTGGAGATGGTGGACAGCTGCTGAGGGGTGAGGAATCAACCAAGGCTGAGATGCTCTCTGCAAAGGCCTCTCAGACATTTACCCATTGCCCATCCTCCCATCCACATCAGCACCTGAAAATATCTTAGGCCAACAGGAAGGCAAGCACTGTGCTTCCAGCAAGCCATGGCTCCTATACCTGACTTCTGGAGTCCTGGTCCTGACATTTTGCTCTGACATATTGAGGCCATGTCTCTTGATCTGTCTGTGTTGCCAGTTATACAACCTCTTATACAACTGGACCTAGGGATTTTCCATTTATGTCTCCTTAAGGGTTTTCCAGGAATATTCCTGACTACAATATACATCTTTTCCATTCTCTCCTTTTCATTCACAGGGATGTCCAGTAAAGGGCAGGCACAGTTTATGCACTCTGCCTGTCTAAAATTTAATGAATTATACTTCTAATGAG TCONS_00159107 r 3' 169878 TCONS_00159113 r 5' 19 EMBV3_03936 GGATGAATTTGTTTTGGTGGTGTGAGGGGGAGAATGGCAGTTTGTATCGAGTTATGATGC Gene BVT0102_128289 + 0 NULL GK000002.2:47302219-47315193 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33144 TCCGTGTCAAGAGCTTATCAGAGCATCTGGAAAATATTACACATCCCTAAAGTTGCTAGC Gene BVT0102_223078 + 1 EMBV3_08665 GK000017.2:66828140-66852835 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077943 TCONS_00077945 TCONS_00077944 1 XLOC_047181 NonCoding TCONS_00077943 XLOC_047181 NonCoding NonCoding - 17:66838466-66842680 - TSS58114 1508 2 TCONS_00077943_4 79 0.45026525198939 3 0.642772371231901 0.000201748781560726 1.52871749744119e-08 0 2.86939807825078e-10 0.000464845468359239 5.841550668232e-09 9.28772542841553e-09 3.04729289645809e-10 1.18976467133229e-08 0 0 0 0 0 6.38430996011489e-09 0 0 0 2.59318965962411e-06 9.5288538120563e-05 1.97428808078448e-06 0 0 0 9.01674700847521e-09 1.19092990361339e-08 0.000167067196574483 0 0 0 XM_005198170.1 ASB10 PREDICTED: Bos taurus ankyrin repeat and SOCS box containing 10 (ASB10), transcript variant X5, mRNA. 3e-10 71.6 71.88 0.104774535809019 NR_033894.1 LOC286114 Homo sapiens uncharacterized LOC286114 (LOC286114), non-coding RNA. 6e-31 140 70.75 0.205570291777188 0 noncoding 0 0 0 0 0.00451028017874594 0.972271549173507 0.0194761117721973 0.708498281300897 TAGAAGCCTCTCCAACATTCCATGAGTGTGGCACAAAAGAAAGCCCAGCTCCTGGATTCTGCCAGGGCAAGGAGCAGACCCACTTCCTGCAACAACTCCAAGGCTTACCACTGGATAATAGGAGAATAGAGCACAGGGAGAGGAAAAGAAAAGCTACTGCTTTTCAAGAACCAGGAGGCAGAAGAAGGGGAGGGGGTGCAGGCGAGAGAACTGCCCAGGCACACATGCAGGACCAGGGCAAGTGGAGACATTCCTTCACACGCACTGCGGCAGAGAACCCTCAGGAACTCCGGACTCCCCCATGCTCCCCTGGGACCATCAGACCAAGCCCTACCCTCCACAGGCCCGAAACCACCACAGGAGACAAGCAAGAGGACACTTAACCTCCGGAGCCTGTATGAAGATCGTTTGGACTAAAATGTCAAAACAGAGTTAGATTAGTTTGCTAGAGCCTCTGTAACAAAGTACCACAGATCGTGCAGCTTAAACATGGAAAAACGCTGTCTCACAATTCTGGGGGCTGGAAGTCCAGGATCAAGGTGTCAGCAGGGCTGGTTCCTGCAGAGAGCCTGGAGGGGAGGGTCTTCCCCACGCCTCTCTCCTTGGCTTGCATGTGGCCGATTCCCCCTGTGTCTCTCCATGTCATCTTTTCTCTGTAAGTATCTGTGTTCAAACTTCCCCCTTTCTATGAGGACACCAGTCAAACTGGATCAGGCCCCACCCCGATGACCTGGTTTTAACTTTCTCACCTCTGTGAAAGCTCTGTTCCCAAAGCAGGTCACATTTTAAAGTACTGGGGGTCAGGAGTTCAACACAGGAATGTGGGGGGCACACTTCAAACCACAGCACGGGTAAAACTTAATTGTGCTTTTGTTTTGTTTTCTGCCAGTGCTGGGGGGTGGGAGAAGTTGGAATGGAAGTCGTAAGGAAGACCAGATCAGCTACAGACAAAGCAATTACATTTTCTTCACACACTCAAATTGCAGCAAGCATTCAACGTGCAACCCCAATACATAATTTAAGCAGATTTGTGCAGCCTCCTGAAACAATAGCGTGGATTAGGCACGGCCCCCAGAGATAACAAAGCAAGTTGCAGTCTTGTAGCTCCAGTAAAAGGGGGGAAAAAATGGAATAAAACATTACCACAGTGAGAGCTAGCAACTTTAGGGATGTGTAATATTTTCCAGATGCTCTGATAAGCTCTTGACACGGATGATTTTATCGAATCCTCATGCAACCCTACAAGGCGTGTTTCCTACTCTCCCAGGCTTAGGGATGGGGAAGCCAAGTTTCAGAGAGGAAATGTTATTTGCCCAGTCCACCTGGCCTGATTCCAAAGGGTGTGTGTGTGAATACTGCCCGCTGTACCTGCCTCATTTTCCTGGGCTGGGTGACCTCTTCCTAAAGCTTTAAAGAGCGCTTCCTTCTCCCTCAAGGGAAGGGTTGGGGCAGGGACCCGAAGTGGGGTACTGGTGTGCAGAAGGCTCAGATTAGCCAGATCTGTAGTC TCONS_00076051 r 3' 10328 TCONS_00077946 s 3' 10156 EMBV3_20116 ACACACAGAAACAAACACAGGGAATTAGGAACATGAGGAGTCAGAGGAATATGTCCCAAC Gene BVV0102_097919 + 0 NULL GK000016.2:13045221-13213109 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29997 TCACAGTGGGATCCTAAAAATGTATTTCCTTTTTCATTTGCTCAACTGTCTATCAACCAA Gene GeneID:510133|TMEM215:NM_001101071:46_cdna Constitutive 1 NULL GeneID:510133 8 GENE TMEM215 NULL transmembrane protein 215 EMBV3_00504 CAGTATAAATGCAGACAGCAGTTGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTAC Gene BVV0102_022853 + 0 NULL GK000011.2:93991686-94010159 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033828 1 XLOC_020061 NonCoding TCONS_00033828 XLOC_020061 NonCoding NonCoding - 11:94005068-94009605 - TSS24827 4537 6 TCONS_00033828_2 57 1 0 6.29755620648563e-05 0.000416377731418436 2.24363128394425e-05 2.01335587123888e-05 0.000105555795835737 2.60177926751078e-05 5.14146474840678e-06 6.51830874737471e-05 0.000121734461086238 0.000133310812070489 4.18785715653809e-05 9.45738928612577e-05 1.26483755902555e-06 1.65889342879363e-05 3.46040013532072e-05 0.00133891419588996 0.000607446016439239 0.00118901117403209 0.000148571291637229 7.92532798239348e-06 4.68373269744224e-06 0.000757277087223421 0.000309372951699581 0.000713152801294668 1.52710609592793e-05 1.70818101246673e-05 3.87423911517449e-06 0.000141843714857674 7.16904183915375e-05 6.22825105497229e-05 XM_001251110.4 RC3H2 PREDICTED: Bos taurus ring finger and CCCH-type domains 2 (RC3H2), 2e-126 459 100.00 0.0557637205201675 XM_005252056.1 RC3H2 PREDICTED: Homo sapiens ring finger and CCCH-type domains 2 (RC3H2), transcript variant X2, mRNA. 0.0 6011 90.85 0.957681287194181 0 noncoding 0 0 0 0 -0.0130080970698357 0.904013878381352 0.0594403430446078 0.255401239921084 ATTAAGGAGTATTTCAACCTCCCTGGCCTATCTACTTCTTTCAGATCCTTACCAGTGATGAATGCATGAGGCAGGTGATTATTTAAATCTCAAAGAGTATCCTGGTAGCTTGGTGAAACCAAAAAATTTGCCAAGGAAGTCAAGGTAACTAAAATGCACTATAAACTTAATATTGATACTAAACAAACAACTTTTAAGGTGGACAAATAATTTTATTTTGTGCATGCAAATACATGTCAAGTACTGCAAACTTGTTCCATCAATTTTCTCTCAAACACTGGAAATCATGATGCTCTATTCTGTGAACAGCCAAAGCTAATATCTCTTCACTTCAGTGCTACAGCAAAAACACACAGAATTCACTCTTTGCTATTCACTATCATCACAACCCTCATTGTTCCATCTCTGCCCTCCCCCCATATACAGGCCTTATGAATCCTAGCCTTCCCCTGTTTAATCCTATTTCTATAGCACAAAGGGAAACATTACAATTTGGAAAATTCAAATTGAAATAAATGGAATAGAATTTATTCCCATATATATTCCCCATTTCATTGTACAGAATTATTTTAAATTATAGTTTTAAATAGAAGCTGAGTATATGCCTTAAAAATGAGCATTAAATCCATCTTAGAGATGGTGCCTGCTTTTTACATGATGGGTGTACACCATCTTTTAATTTCATTTACATTTCAATCGAACAATAGATTTGCAAAGAAAATGTCTAATACAGACGTAAAAATATTCACACTAGAGCTTCACAATCGGTTGTACAATTGACAAACAGGCCTCTTTTCCCAAACTTTCCAGCTAAGCAAATTTATAAAATGTAATCAATGCAACAAGAAAAAACATTTCTCTTTCACTTCCAGGGAAAAGAATATGCAATAAACAGTATAAATGCAGACAGCAGTTGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTACAAATAAAAGCCACATGTGTTGTATCACAACTACAGTATAATTGTTTGCCCAGCTAAGAGAATGCATGCACTTCCATGCCTTGGGTTATAAAGTGAGGCCTAATTCTGGACAGATTGATGGAATATATGCAAATGACCTTGGCTTTTGGCAGTACTAAGTGCAGCCAGTGTCTGTGTTCCACTGGTTTAAGGAGATTTAAAATTTTTTTATTTAAAAAAAGAAAAAAACTGCCAATTTCAGACTTCGGGGAATAACTGCTCTTGGAGTAAAAATAGGACTCCACTCAAATGTGGGGTGTTCTGATTGGTGGCCTTGACTCCTTGTATTCCCTTGCCAGCAAAGGGATACAAAGAAACCGCTAGTATAAAGGAATGACTAGCAAATTTATTCAATTTATTCAGAAGATGAGATACTCCTTGAGCATGTGCATTTGTGTTCTGCTTGCAGAAGGGGTTCTTATGTAGGAGTTACAGCAAGTGATCCCAACAACACTCTTCATTCACTAAGACACAAGGAAATTTCTTCCAGAAAAGCAATACACAGTTGCAAATGCAACTTTCCCCTTGAATGATTAGTCACCAATACTAGTGACAGTCTGCTCAGAAAATGAATCTAGCAACTAGGGAAGAAATATTCAGATTCAAAGCTGAAATCACATGCTCAATCTGATCATTACAAACTCCACGCCTGTTAACAAGACAACAAGGGCTTTAACATCTAAAATGTACAAGCAAGCTAGATGGTTTTTAAAACAAATTTTCAAATGTTTAAATGATCCCATTTTAAATTCCTACAAATTACTGTGCATCCTGTAATTTTCTCAAAGCAACATACAAAACTGAGATGTGCTTTATAAACTTAGAATCAACTTGAAATGTGAGTTGAAAGTGACCAGATCCACACAAATAGAAAATTTCATTTCTAGCATAGGAGGTTTCATTTATTATTCTGAGAGTAAACAGCTACTAGGAAAAGTATCAGTGCTACTGACCCACCGAAGTACCTCCTCTTAAAAATTACGATCCACAACTTTCACGCATGACGCTGGTTTATGAGATGGTATTGAAAGTCATGGCAGGAAAGCAAAGGAATCTGCTTTGTTCAGGTACCAACTAGACAAAATACTTCAGTAACTTTCTCAGGATTCATGAGGTGAGATGGGACCATAAGGAAAGAACTACTGATGCTACATCATAGTATCTGAATGAGGCACATGAACTTCAGAATGTGACTCAGAAGTTTTACAAAACACAAAAAGTCAAAACAAAACAAAAACCCCCCACCATTTTCCCACTTTTCAGACCTCAGACTACTTTTTCCTAATTAGACCACACACCACATATGCAGTTTAGTTGACATTACAAACTTCCTCTCCTATTGCTTTATATCTTTTGATTTCAAATATATGTACATCATGAACATGTTGGTAAAAGGGTCAAATGACAGGGAATAACCCCACTATAAAAGTCACACTCTAGGTCTGATTTGTGATTTTCTCCTCTATGATACCATTAGGTACCTTTCAGAAGAAGGATCAGATAAACTGCTCTTTCTTCTCAAGTGGCAGAGAACCAATGTCTTTACTACACATTTACTTCACGCCATGAGAAACAGAAGATGGTCACTACATAAAGGATGCAATACAGAATCATCCCTACACAGAAACAATTCCTATGCTGTTAGTGAGGAAGAGAGTAAGTTTTTAAGAACAAGGAATTATTGTTTTATGGGATCACCTGCTGCAAGACAAGCATTATTTTAATATAAGTGTTCTGAGACATACCATTAAAGTTGGCAGGTATATACATACACTGATGCAAATGTAATTTCACTGGACAAGTAGGCAAACACCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAAAACTTCAATTTTAAAATTAAAAAGATAAGGTTAAATACACAAGATCAATTTATGTAGTATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGCGTAGTTCTGTTGCACAGAGGGTTCTTTCCCTGAGGGCACATAAGGAGCTCTCAAACTGTTAATAGGTCTCTATTTTGTAACAAAATAGCAATTTTAAAATCTTAAAAAAAAATACATTACCTTCAACATGGAAGATCTCACTATTTAAATATCCATGAAATAGACATACTGGTTTGCATATCCTTTTTGGAAATACAAACAGCAAATAAAGTACATTGGAAGCATTTCAAATGTAATAAGCGCATATTTTATAGAAAGGTTCTGATATAAATTATATAACAATCACGTTCCTGTAATATCCTAGGCTAATTCATAATGTTGGAAATAAGTTAATGTAACATGGTTTAAAACTCTTGTTCCTATTCATTTCAGGTTACAGAGTGAAATAAATAAAATGTCTTTGCAGGGAAAGGGGCACTGGCCATGGCAAAAAGGTACAGTACTAACCAAAGGAAACTAAGTCAAGGCTACTGTGCTGTTATGCTACAAACAAACATCTTCATACATCTGAGTATTAAATAAATGTGTAAGATCTTCCATACTGACACCAGAATATCAAAACTACCCCTTTGTTTCTCAGGTATATTTACAACTTATCAGTCACCTTATGAGCATGTTCATTAAGACAGGTATCAAACAACAGTATTTACTCATTCTGATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACAAAACTTTTTATCAAAATCTTATCTGATACAATGCTGTGGTTTTGTAAAACAACTAAATAGCTCAGACGACCAATAACATGATCCTGTTTAAGCATCTTGCTAGCAGGAAAAGCCCTTACATACAGTACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAAACAACTTCACAGAAGTTAATTAAAAAATAATAATAAAAGTCAAACTAATCTTAAAGAAATAAGGGGGGGGGGGGGGGGAACAAAGACACAAACTATAGGTAAGATCACCAGGAAGGAATGCCCAGCTTTTGTTTTCAAATGTTGACTGAAATTTAGGTTTCAGTAAAATATCTCCCACAAATCTGGAGCACAGCTGGTTGAACATACTGCATACTTTCAGATGCCAAGTCAAAACACTTTTCAGTCACATTTTAGCAGGGCAGCAATCATTCATGTTTTTAAGTATGAATAAAGGTTAGCCAATATTCTATTATTACATGGTTCATAGTCTTATCAACCTAACAGAAAACAAAGAAAATTAAACCCCAACATGAAGTAACAATAAACAATATTTAACCAAGATAATGCAATGAACATCCAAATTAATTAAATTAAAAACCCAGCAATACCATCTTGTTAGTCAGTGCAAACGCTACATACAGGGTTTTCTCAAAAAGCTGAAAGCACCTGATTCTTTTGCCAAGTCATCAGATTCAATAATGTACAGGCTTAAATCTGCATTTTAAAAAACTGCCATTACATTAGTGCATAATTTATCAAAATTGTAAAAACGATTCTGCATAACTTAGGAGAATTTAATATCTAGTACATCAGCTGAAAGACTTAGGCACTTGGTTATA TCONS_00028806 TCONS_00028807 TCONS_00028808 TCONS_00028809 . 3' 263 TCONS_00028806 TCONS_00028807 TCONS_00028808 TCONS_00028809 . 3' 4799 EMBV3_22455 ACGTGAAGGCCCCGATGTATCTGGACGTGACCTGAGTTGCACCGAGGGCCTGTTCAGAGC Variant GeneID:514636|C25H16ORF13:NM_001038106:165_cdna 444^525 7 EMBV3_41431 GeneID:514636 25 GENE C25H16ORF13 MGC134534 chromosome 16 open reading frame 13 ortholog EMBV3_24593 TCGAAAAACAAAGTGTTAGACCGTGTCTGTGCATTGATGGGCACTCAAGCGTCCCGTGGG Gene GeneID:523846|SPOCK2:NM_001101115:335_cdna UTR3_Alt 2 NULL GeneID:523846 28 GENE SPOCK2 NULL sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 EMBV3_14474 AACTCTCTGCCATGCAAGTGCAAGTTCTGCGAGGTGGAAGTTGTCTGGTCCGGTGGTACA Gene BVV0102_068432 + 0 NULL GK000012.2:34198339-34235128 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036823 TCONS_00036824 1 XLOC_021238 Coding TCONS_00036824 XLOC_021238 Coding Coding LOC100848516 12:34229543-34234912 = TSS26719 1087 1 TCONS_00036824_3 244 0.183072677092916 6 0.798621460506706 1.87750996047827e-05 9.24419768771972e-06 2.17840316636857e-05 0 4.58861200810309e-06 1.20661068611796e-06 8.36301989063448e-06 2.51441884343219e-05 0 9.65218664052293e-06 1.66986376238236e-06 9.03465956949009e-06 0 7.57312611494599e-06 8.51547734094097e-07 5.81408762243152e-05 3.81836932231538e-06 0.00045952768671429 1.35411955163896e-05 1.34601094569243e-05 1.00073739905604e-05 1.3578263603774e-05 4.98714941164949e-06 6.94026708382746e-05 9.98583888352314e-06 3.35093327943944e-05 1.26325913325782e-05 0.00011123312142908 4.99885256561428e-06 2.12023470693582e-05 XM_871192.5 C23H6orf222 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf222 (C23H6orf222), transcript variant X3, mRNA. 9e-59 232 85.19 0.195032198712052 0 coding ATGCAAATTCCATCCAGTCTCACCCACCTTCAGAATCCTCCTCCCGGCTCTCTCTTTCCAGAAGCCCAGTCCGAGGATCGAAACCCCCACATGGACAAAGAAAGCCACGCCAGCACAAAACGCGGATCTCTCCCATCAGCCATACTGGACTTCATGACTCTTCATGCCTTTGCCACACTCTTCATGTCCCTCTTTATCACGGAGGCATGGGCCATCAGTCAGATACCAAAAAGCAACTCTCTGCCATGCAAGTGCAAGTTCTGCGAGGTGGAAGTTGACTGGTCCGGTGGTGTCTTCCAACTCACCTTTGCCCTGATTATCTTAGTGGAGCCACCAGAATGTAACGTGGAAAAGGCTGGCTCGGTCACCAGTACCCTGGACACAGATGTCCACGTTGGTGACTTCAAGTGGGGCCTGGGCTGCTCCTGCAGGTACGCGGCTCTATCAACTCAATCAGAGGCCAATGAAGCTCTTTCTGGGGCCACCGTCTCCCTGTTTCGAGTCACACAGGGTCTGTTGGTGACAACGAGGCATGTAGCTGCATCTAGTGACAGTGAGAGTGGGAGATCCCGTCTCAGCCGTGCCTGGCTGCGTGCCCATGACTGTGGAAGGAGAGAAGAGATTCAAGCGGACAGCTGGCAGGATCTGTCACCCATCCACCCACCCCCAGCCATGCGAGGAAGGAAGCCTCCCACCCCCAGGGGTTCACCTGCCTTCCTGCCTCCTCCTCTGTGAGCTGTGTGGGAGATCCCAGGACCTCTGGGCCCACCAGTTCTCATGCCCTGTAGCCTTCTCCTTCAAAGAGAATATTCTCTGTTAAAAAATAGTTATATCTAGGAAATGTTCCAAATGGGCTTCGCAGGTGGCTGAGTGGTAAAGAATCTGCCTGCCAATGGAGGAGATGTGGGTTTGATCCCTGGGTCAGGAAGATTCCCTGGTGAGGGTTATGGCAACCCACTCCAGTATCCTACCTGGAGAATTCCATAGATAGAGGAGCCTGGTGGGCTGCAGTCCAGGGGTCACAAAGAGTTGGACATGACTTAGCAACTAAGCAGCAACAACAATAAAATATTTGAAATAGACTAAA EMBV3_04048 ACCTTCAGGTGCCTCCAAACCGAATTGGGATCTTCCTAGATTATGAGGCCAGCACTGTCT Gene GeneID:359715|TRIM21:NM_182655:2_cdna Constitutive 0 NULL GeneID:359715 15 GENE TRIM21 NULL tripartite motif-containing 21 EMBV3_29446 CATCTTAGCCGGTGGTACACTACCTCTTACGTGTTGCCTTTTTGTGTTGCTTGGTGCTCT Gene GeneID:531254|COL24A1:XM_002686308:205_cdna UTR3_Alt 2 NULL GeneID:531254 3 GENE COL24A1 NULL collagen, type XXIV, alpha 1 EMBV3_11248 GATAATCTGAAAAGCAAGCTGGATAAAATGGATCCATCTCTGGATGACAATCTGAACTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04855 AAAACTACTACAGCTGGCAATTCTTTGGTGCAACCAGTATTGAGGCCTGTGCAGGTCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14127 CTGGTTGTCATGATTCCCTGCTTGCTGATCCTGTGTTCCTACATTCACATCACTGCTGCC Gene GeneID:510100|LOC510100:XM_002693164:104_cdna Constitutive 0 NULL GeneID:510100 15 GENE LOC510100 NULL similar to Olfactory receptor 10A5 (HP3) (Olfactory receptor-like protein JCG6) (Olfactory receptor 11-403) (OR11-403) EMBV3_40218 AAGTCACACTTCTCCTTTACACAGTTGGGAACCTCGTTAGAAATGACCTCCGCTGCCCAG Gene GeneID:516540|METAP1:NM_001102037:8_cdna Constitutive 0 NULL GeneID:516540 6 GENE METAP1 MGC152490 methionyl aminopeptidase 1 EMBV3_21199 CGGCTCTAGGAACCGAGGTCGAGCTGAAGTTTTCTATAATGGTGCATGGGGGACAATCTG Gene GeneID:505632|LOC505632:XM_002685434:36_cdna Constitutive 0 NULL GeneID:505632 2 GENE LOC505632 NULL similar to macrophage receptor MARCO EMBV3_28529 AAGGCCTAAGCCAAAGCCAGGGGATGGAGGATTTGTGGAAGTAATTTCCTTACCAAAGAA Variant GeneID:614149|NUDT5:NM_001076314:14_cdna 693^824 4 EMBV3_13246 GeneID:614149 13 GENE NUDT5 MGC140268 nudix (nucleoside diphosphate linked moiety X)-type motif 5 EMBV3_36546 CATGCTGCAACCAGAAGACCCTGCATGCCACAGGAAAACGCGGTGCAGCCAAGTAAATAA Gene BVT0102_285619 + 0 NULL GK000022.2:49359380-49379909 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128844 TCONS_00128843 TCONS_00128842 1 XLOC_077958 NonCoding TCONS_00128843 XLOC_077958 NonCoding NonCoding - 22:49364870-49367788 - TSS95976 527 2 TCONS_00128843_1 81 0.743833017077799 2 0.82002056907782 0.00042411681741841 0.000514816146364079 2.01771243895038e-10 1.11810521926215e-09 0.000204635526134886 1.00045558998576e-05 0 0.000101008363844512 2.96210354070403e-05 0 0 0 0 0 0 0 0 0 0.000137863223169711 2.1445010392504e-58 1.57726128294732e-111 0 0 0 4.03600065181137e-09 3.10456870553001e-31 1.53431367215763e-08 0 0 0 NM_001105444.1 DUPD1 Bos taurus dual specificity phosphatase and pro isomerase domain containing 1 (DUPD1), mRNA. 1e-35 154 75.21 0.44022770398482 NM_001013620.3 ALG10B Homo sapiens ALG10B, alpha-1,2-glucosyltransferase (ALG10B), mRNA. 6e-07 59.0 86.00 0.0929791271347249 0 noncoding 0 0 0 0 -0.122125378956273 0.441169674595774 0.024715923987177 0.708017185795521 GGGGATTGGAACCATGTGTTTGGAGGAGGAGGACAGGGAGGGAGAGTGGAGGCCAGAGGAGGGAAGACTATCCTCACAAGTCCTGCTGCCCTCCCCGCACAAGGGGGCCTGGCTGGGTTCGATCCCTGGTTGGAGAACCAGATCCTGCATGCTGCAACCAGAAGACCCTGCATGCCACAGGAAAACGCGGTGCAGCCAAGTAAATAAGCACTGGAGAAAAAACGAAAGGATGCTGTGTGCAGCAACTGGACGCAACTAGAGATCATCATACTGTGTGAGTAAGTCAGAGAAAGACAAATACCACCTGATGTCACTTGTGTGTGGAATCTACAACGCGACACAAATGAACCCATCTATCAAACAGAACCACGGACATACAGAAGCAAGCGGTGGCTGCCAAGGGGAAAGGGGCTGGGGAGAACTGGAGTGGGAGGCTGGGGCTAGCAGATATAAGCTTTTATATATAGAATGGATACACAACAAGGTCTTACTGTAGCACACAGAATTATATTCACTATCCCTTCATA TCONS_00127084 TCONS_00127080 TCONS_00127083 r 3' 4772 TCONS_00127084 TCONS_00127080 TCONS_00127083 r 3' 5195 EMBV3_15929 ATGTCCCACGAAAGGCTCTTGGCAGAACAACTCCGGTCAAGAAGGACCTTAAGAGTGTTC Gene BVV0102_156364 - 1 EMBV3_08362 GK000013.2:74040826-74043096 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043864 TCONS_00043862 TCONS_00043863 TCONS_00043861 1 XLOC_026056 Coding TCONS_00043864 XLOC_026056 Coding Coding YWHAB 13:74018885-74042561 j TSS32358 2953 1 TCONS_00043864_2 246 0.0419911953945141 7 0.875564941921859 0.000985699525147895 3.4297608446858e-05 2.8730366269277e-08 0.000190529500544009 2.99790043228499e-08 5.55706498775983e-08 0.000392554352236601 3.28791928377362e-06 0.000829782643703047 0.000324928304191971 7.51411018830061e-11 2.01326844677946e-06 2.77701609694728e-10 1.59686210717309e-10 2.52377844499101e-10 3.97512523662306e-10 1.91517700517773e-10 6.08555299362473e-10 4.91126277451062e-08 0.000396029270579015 5.75288205769943e-11 1.37874842390007e-10 1.73329619666018e-10 1.31709353738782e-10 0.000426396310175423 1.89825088642284e-08 5.6186252918841e-05 3.28886062776336e-10 2.45565897503654e-06 1.04298223546303e-10 NM_174794.2 YWHAB Bos taurus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAB), mRNA. 0.0 4376 99.96 0.822553335590924 NM_139323.3 YWHAB Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAB), transcript variant 2, 0.0 2055 84.87 0.608533694547917 TCONS_00043864_2 sp|P31946|1433B_HUMAN 1433B_HUMAN 14-3-3 protein beta/alpha; 0.0 508 100.00 0.995934959349594 1 coding 0 0 0 0 -0.53295685291863 0.0452554975590265 -0.011328940050332 0.809539985148557 GAGCCGGAGCGGAAGTGGTGACCGGAGCGGAAGTGGAGCCGCCGCAGCCGCCGATTCCGGAGCCGGGGTAGCTGCCGCCGCCGCCGCCGCCGCCTCTGCAGCCGCCGCCGTCGCCGGAGGAGTGGGATTGGGGAGGAAGCGGTCACTGCGCCCGGAGCTCCCCTCGCAAGGTTCTCTGCCCCCTGCAGTCCTCCCACGGGAATGACCATGGATAAAAGTGAGCTGGTACAGAAAGCCAAGCTCGCCGAGCAGGCCGAGCGCTACGATGACATGGCTGCGGCCATGAAGGCGGTCACAGAGCAGGGGCACGAGCTCTCCAACGAGGAGAGAAACCTGCTGTCCGTCGCCTACAAGAATGTGGTCGGCGCCCGCCGTTCGTCCTGGCGTGTCATCTCCAGCATCGAACAGAAAACTGAGAGGAACGAGAAGAAGCAGCAGATGGGCAAAGAGTACCGCGAGAAGATCGAGGCCGAGCTGCAGGACATCTGCAATGACGTGCTGGAGCTGTTGGATAAATACCTTATTCCCAATGCTACACAACCAGAAAGTAAGGTGTTCTACTTGAAAATGAAAGGCGATTATTTTAGATATCTTTCTGAGGTGGCTTCTGGAGACAATAAACAAACCACTGTGTCGAACTCCCAGCAGGCTTACCAAGAAGCATTTGAAATTAGTAAGAAAGAAATGCAGCCTACACACCCCATTCGACTGGGGCTGGCACTTAATTTCTCCGTCTTTTATTATGAGATTCTAAACTCTCCTGAAAAGGCTTGCAGCCTGGCAAAAACGGCGTTTGATGAGGCGATTGCTGAATTGGACACACTGAATGAAGAGTCTTACAAAGACAGCACCCTGATTATGCAGCTGCTTAGGGACAATCTCACTCTGTGGACGTCGGAAAACCAGGGAGACGAAGGAGATGCTGGGGAGGGAGAGAACTAATGTCTACCGTGCTTTGTGATCTCTTGAGTGGCACTCTGTACCCTCCACATATATCCCTTTGTGCGATAAAAAAAAAAGAAACGTACGTCGACTTTCAATTTTTCACAGCCTCAGCCTAGCAAAAATGGTCCATGGGATGAACAGCTGGTATTTGTATCTAAAATTCAGATTGGTCACATAAATGCCACGGCATTCTGAAGTTTTGATCTTGATTAACATTGACAGGATTACTGTGTGTTTCATTTAAAAAAAAAACAAACAAAAACTGAACACTGTGATTATGGAGTTTTGTAATTTAGCAGAACTCTTACTGGTAGGAAAAAAAAAAATAGACCTGAATTATGTGTAACTTTTTGGAAAGTTAAATTTGATTCAAAACAGTTGTCCCTGAAATACAGTTCCATTGTAAAGTTGTACAGAAAGTTATAGATTCTATTGTGACACTGGGACTTGGAGTGGGTCACCTCTCATTTGGCATTCGAGTTTCACAGTAATTTCTAGTGATTCTGCCCATTCTGATCAGGGCTTTTAGACACTTGGTATGTTGGGGCTTGTTGCCACTGAAAAGCTCGTGACCACAGACGGCCACAGTGTCTTCCTCCAAGGAAACTCGAAGCCAGAAAAGAACATTCTTGGTCGAGATAACTGGGTTATGACAGCATGCAAAGGTCCACTGCTCATAGACCACCTGTGACTCCAGCCCCTTCCCCTATAGCAGCATGTTTAGTGATTGGCAACTTGTGCTTAGGAAGTGGAATCTGTTTTCCCTTTAACCATGAGCTCAAGATGGAAAAAAAAAAAAAGCCGTGTATCTTATGAATGGCCTTATCTGTTTCCTGGGTACTACCTTTAAGAATAACGCTCTGCAGAGATTGTCTTTCACTTGAGGAGTAAGTACTCAGTGTTTGGGTTCTTCCTAGCTCGGGGCTTTAAAATTTTGAAATCTAAACATTCTTTCCCACAGTCCTTTTTGACTGTTGACTTTAGTCTTCTCTAAATTTCTGTCCTTCTGCTTCCTTACATTTTTTTCTTTGTGCATTCTCTCTCTCTATGCCTTTTGTTCATGGTTTAGTACTAGATGGGCAGGGACAGGGGGTCCACAAGGGGGTGAGGGATGTTCGCGAGCACTTTGGTGAGCCAGCGTTGCTTCAGCGAGTTGAAAAGAGCTTCCCACATTTCAGCTCTGTCTTCCTCCAGTTCTCAGCACGGTGGTTGCTCTTCAGTCACACCAAGATCTGACTCCAAAAAGTATTTTTAAATAGCCATGGTTTCTCTTTATATTGCAGCCAACCCTGATAATGCTTGTTAGCACCTGTCACCAGCTCTCCCAAGGGTACCCATCCCGTCAGGTTCACAGACAAATGTCAGGGAAGTTGCATGAACACTGCGATGGGAGAGTCAGGAATAGCCCGGCCTGCCAGTCTCAGTCTCCACCTTCCTCCCCGAACATTCCACGTAGCTGTAGTGTCCCATCTGTTTGTCCATCTGTTTTACTGAAGCAGGCAACAGGAGAGGCTCAGGGGAAGTATCATTTCAAGGTAGGTTGGACCAATATTTTCAAAAAGGATTCCACACCACAGATGCAAACGAAGGCAGACAGAAGGGTCTTGGTGCTTAGTTTGGGACCACCACCATGACCTTGTTCTGTCAGGTCCTTACAGTTTCCACAGAGGCTGGACTTCGTGAACCTTCGGGGTGGAGCACAGGTGGGTTGGTTTCGCTGAGAGATGATCAGGGAATGTCCCACGAAAGGCTCTTGGCAGAACAACTCCGGTCAAGAAGGACCTTAAGAGTGTTCCGGAATTCTCACATGGAGCCTTCAGTCCCAAATCACCAAGCCGGGGTCGGGGGTGGGGGAGGGTTTCCCTGGCCGTCCAGTAGTTAAGAACCCCCTGTGCTCCAGTGCACCCGGCATGGGTTTGATACCTGGCCAGGGAACTAAGATCCCCATCCTGTGCCGTGGGGTGCGGGCGCAAAAGCAAATCACCAAGAGGGTTCCAGATGGCTGAGA EMBV3_11486 CGGCGCGGCCTCTTCGCCGCCGCAGCCTGGGTGCCCAATTACCTGCCGTCGGTGAGCTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07325 GTGGGTTCAAGAGCCCGTTGATTTGTGAAGAATTTGCTGCCTTCTTATGAACTTGCTGAC Gene GeneID:538508|CCPG1:XM_002690897:44_cdna Constitutive 0 NULL GeneID:538508 10 GENE CCPG1 NULL cell cycle progression 1 EMBV3_02480 AGGAAGTGCCTGAACAAGATGTCGGTCTACGACCCTAAAAAGTTCGAGTGGAGGGAGCTG Gene GeneID:514526|KBTBD5:NM_001015598:101_cdna Constitutive 0 NULL GeneID:514526 22 GENE KBTBD5 NULL kelch repeat and BTB (POZ) domain containing 5 EMBV3_26854 TCAGCACCACCCTCTCATTGGGACCCTTTCCCGTGTGCAGACTTGAGAAACTATTTTTGC Gene GeneID:512514|CD27:NM_001082434:20_cdna Constitutive 1 NULL GeneID:512514 5 GENE CD27 MGC148404 CD27 molecule EMBV3_16217 TACTGGCACACCAGTCCAGGGAGGTCTGACTTACAGAGAAGGTCTCTACATCACAGAAGA Gene GeneID:513608|ARG1:NM_001046154:4_cdna UTR3_Alt 3 NULL GeneID:513608 9 GENE ARG1 MGC128755 arginase, liver EMBV3_00904 TCTACTTGATGCCATGAAGCATTCAGGTTGGTTCGAGCTGCTAACCTTAGTGGAGACTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33500 TGGTAGCTAAGGGCTTCCAGGTGATTGGTGATCTTGGTAAAAGAGACCTGGCAATGATCC Gene GeneID:512276|SELS:NM_001046114:20_cdna Constitutive 0 NULL GeneID:512276 21 GENE SELS MGC137429 selenoprotein S EMBV3_40825 GTTGAATGTATGGTTGTGTGTGACTCTTCAGAGCTTGAAGATGTGTGACTTCTTCAGTTC Gene BVT0102_237566 + 0 NULL GK000001.2:42469404-42518055 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003133 TCONS_00003136 TCONS_00003132 TCONS_00003130 TCONS_00003129 TCONS_00003135 TCONS_00003134 TCONS_00003131 1 XLOC_000800 Coding TCONS_00003134 XLOC_000800 Coding Coding CPOX 1:42515620-42530647 j TSS1635 3927 1 TCONS_00003134_2 233 0.168321874204227 7 0.739118860641555 4.12380051941516e-07 0.000826967815799575 0.000106809142876226 5.49369857114527e-49 1.3519843769168e-09 0.000142918935637272 4.42091380169896e-05 6.51300061168991e-09 0.000120150487446475 7.96054184994515e-05 1.81435384272584e-05 4.36461629836322e-09 1.28807741993242e-08 0.000190773355688964 0.000128285850293386 0.00245127640751962 0.00122711842363702 3.80487201422488e-10 1.38113947537575e-06 2.21381863322073e-09 5.91714450956469e-50 0.00073231570603312 0.00148483444715683 0.00246953008687396 1.98232461397419e-08 7.93769680090229e-05 1.54521560794229e-08 0.000298788496053249 0.000158459780635334 0.000150888307838523 NM_001192393.1 CPOX Bos taurus coproporphyrinogen oxidase (CPOX), mRNA. 0.0 2610 100.00 0.368220015278839 NM_000097.5 CPOX Homo sapiens coproporphyrinogen oxidase (CPOX), mRNA. 0.0 1658 77.93 0.526355996944232 TCONS_00003134_2 sp|P36551|HEM6_HUMAN HEM6_HUMAN Coproporphyrinogen-III oxidase, mitochondrial; 2e-168 477 94.83 0.991416309012876 1 coding 0 0 0 1 -0.932538609833353 0.201791848566138 0.0786678171800931 0.156970675437491 TTTCAAAAATCTGCAATTTTATATGGCACTTCTCAAAGAAGTCTTAAGGAGGTGGTGGCATCAGCTGTGTACTTCAAGACGGGCATGTTTTTGAAAAGGCTGGGGTTAGCATTTCTGTCGTTCATGGAAATCTTTCTGAGGAAGCAGCAAAACAAATGAGAAGCAGAGGAAAACTACTGAAGACAAAAGATGGTAAATTGCCGTTTTCTGCTATGGGCGTGAGCTCTGTCATTCACCCCAAGAATCCTCATACTCCTACTATCCATTTCAACTACAGATACTTCGAGGTGGAAGAAGCGGACGGTAACACCCTGTGGTGGTTTGGTGGTGGATGTGACCTTACCCCAACATACCTGAACCAAGAGGATGCGGTCCATTTTCACAGGACTCTCAAGGAGGCATGTGACCAGCATGGTCCAGATCTCTATCCCAAATTTAAAAAGTGGTGTGACGATTACTTTTTTATAGCCCATCGTGGGGAGCGGAGGGGTATCGGGGGTATCTTTTTTGATGACCTCGACTCTCCATCCAAGGAGGAGGTGTTTCGCTTTGTGCAGAGCTGTACCCAGGCGATCATTCCTTCTTACGTCCCCCTCGTGAAGAAGCACTGTAATGACTCCTTCACTCCCCAGGAGAAGTTGTGGCAGCAGCTCCGAAGAGGACGGTATGTAGAATTTAACCTGCTGTACGATCGGGGTACAAAGTTTGGCCTCTTCACTCCGGGATCCAGGATTGAAAGCATCTTGATGTCTTTACCTCTCACTGCCCGATGGGAGTACATGCATTCACCCTCAGAGAACTCTAAAGAAGCTGAAATGCTGGAAGTTTTGCGCCACCCGAGGGACTGGGTGCCTTGATGCAGACAGAGCAGCCTTCCTGGGGGCTGGGGGACACTCAGTGCACCTCCTGATCCACTGGCCGACACCACCCCCACAGTGTGGCACGTAGTTACCTGTGTCTTAGAGCTCAAGGCTTCTTTCTCTACCCTGGAGTCTGCCTCCTTGACAGGTGGTGAAATGTGTGTTAAGCACTGGACGCTTCCGCCAGATGCTGTTGGTGGGTGGTGAGGTGGCACCTTGTCAACTAGTTGATGTAAAAACTCATTTGTACTTTAGAATCATTTTATATGACAAGTTTACAAACAAGGACATTGTATTTCCAAGAATTGGTTAAGGGGATCTAACTATTATAATTTGTTTCAGGAAACTTCTCATGTTACTTTTACTTCATGTATTTTTTAAAGATTTAGTTTCTGCCACAAAAATCTGTTTTGGGGTAAATTTTATTTTCATTAATTCAATAAGATTTAGAATGGTAATTTTAGAAAGCTGCTGGAAACAAAGGTAAAAATTTTACTTTGTCATTGCTGAAGTTTCTTAGATCATAATCTTTATATCTTTAGAAACCATAATTTGGTAAAATATTCATTTTTATAATGATAGATATTTAGAAACACTGGAAATTTTCTTAATTTCTGCATGTGTTACAATTCAGTGATTACCTACAGTTAACTGTAAAGTAACATCACTGTTATTTAAACAAGAAATATCTAAGTGGCAGTTTTGATTTTTGTCGATGTTGAAAGTCTATGCACTTTTCAGCATGAAAGCTTATATCCTTGAATTCTGATATTTGCACACTTCTATTCCAGACACTTCTATACAGAGATTTAGACTAAGGACAATCCGGGGGATTTGTGAATTTAGGGAATGTTTCTCATTTAGGAAGTGAGAAACATTTTCCTTCTCTAATTAGAGCAGACAACTAATGTAAGAAGCATGTAGGCATTTTATAAACATATTTCTTAGAAGATGGATGAATTGAAATCACCCTCTTTTTAAATTAGAGATTCTGCAAGTCTTAACTTTGCTCCTAAGAGAAAATTACAACAGAGTTTCTGAGACTTCTTTGTTCAAATAATAACATGAATGTATTTTATTCATAATATATTGTAGTTTATAAGGAATGGTATCTCCCTACACGTTATTGAGCATTATTTTGGAATATGTTGAATGTATGGTTGTGTGTGACTCTTCAGAGCTTGAAGATGTGTGACTTCTTCAGTTCTCTTCCCACAAGTATGCTGATAAATTTTGTTATGAAGTATAACTAAGGAAGGTTTGTATTTTTCATTTTTTCTAGGATAGTTGATTTAGGAAAGATGAATATTTTTTAGTACTAAAACCATAATTCCTCATTCCTAAATATTTTAGCCAAGAAAAATGTAAGTTTTGTACTTGAGTTTTCATAGCAGGTTTATTCTCAATAGCCATTTGGAAATAACACAAATGCCCGTCAGCAGGTAAATGGATAACCAGGTTATAAGATATACTTATGTTAAAATACTACTCAACAATGACAGGAAACGTCTACTGATAAATGCAGCAACATGGGTGAATATCAGAAAATGGTTATGCTGAGTAAAAGGAACCAGACACAAAAGAACACACTCACTGTATGACTGCATTATATGAAAACCTAGAAAAGTCAAAACTCTTAACAAGAGAAAGCATATCAGTGACTGCCAGGGGCTGGGTAGGGAAATTCACTGTGAAAGGGAACAGAAGAATGTTTTGAAGTGATGCAGATATTCGGTGTATTGATTGTGGCACTGATACCAGACTGTATACATTTATCAGAGCTCATTGAGCTGGACACTTAAAATCATGGAATTTTATTTTGTTTATGACTTATAATTCAACAAAGTCAGACAAATGAAAAAAAATATTATTAGGCATATAGGAGCAAATGTTCAGTATACTTCGGTTTGCCTTTTACAATAAAACGTCCCTATCATATAGATCTGCCAACCTTGTGTTTGGGGTTATTGGGCTCTGGGCATTGGACTAATATAAATTTCATAAATTTTGGGTACATGTCAGTTTTTTTATACTCTTCGGTAATCTTGTCTTTTTCTTACAGATGAGACTATAGGGGAAAAAATAGCAGAATTGTGTAACTGTTGGAAAATCATTCTGCGGTTATTCAAAGTGAATTTTTGTTTCAAATGTGTATTGATAGAGTCTGCTGGAGGCCCAGGGTACACCTCTAAATGCTTTGGACACCTAACTGCTGCTGTCTCACACATTATATTGATGGTCATAAAGGGTAGAAATTTGGGGGAGGGATATAAATGCTTTGGAGCAAATTTCTAACCTCTACTTTATGACTGTATTCTGCTTACCCACCTGTTCAACTGAGTAATTAATGAGATAAAAACTTCTGCATGCTAAAGAGTGTCAGATTAGAAGACCAAATAATCTTTTTTTTTTTTTTTTAAATGCTTTATCCTTCCACGAGTCATTTGCTGTTACAGTTCATCACGGCTGGAATCGTGTTCGGGTTTGTTTTACTTGCGTCTGTGCCTGGTTAGGCTGACTCAGAGGATAGGCTCAGCTCCCATGGTGGATCTAGTGTCTGCAGGTGGCTCAGAGCACACGTTCCGCCCAGCAAGGCAGAGGCGGTGTCTTCTGATCTCACCCCAGAGGCTGTGCAGCGTCGCTTCACCTTCTTTTAGTTACAAGTGAGTCACTAAGAATGACTCCTGATCCACAGGGGCAGGAACTGTACCCCAGCTCTCAGTGGGAGGTGTGCAATTGTGTGATTCTCAAAATCACAGAATAGATTTGTGCAATTGTGTGATTCTCAAAACCACAGAATAGATTTGGCACCCCTCCCTCATTGCCCTAGTCAAATCCTGTTGCGTCCCCCTTTGAAGTGTTTCTTTTCCCACCTCTGTCCACCGCTATCACTGCTTTGGTCCCACCTTCCCTCTCACCTGAATGTTTGCAATCTACCACCTGCCCTTGGTCACTCTGACCTCCATCCTCTCCCTATAATACTTCACTGAACCCCATAATTGTGCCCTCAAATGTACTGAGCAGCCTTCCTTCTCCTACAGAGAAGTTTCTAAGCTCAGTCTGATAG EMBV3_34458 ATTGTACAGGTTTAGGAGTGTACCTCAGCTCTGCTGCTACCCACAGCTCACATTCAAGCG Gene GeneID:510712|LOC510712:XM_002688609:381_cdna Constitutive 0 NULL GeneID:510712 7 GENE LOC510712 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_05287 CAAATATTTCCCCTCAAAGCTACCTTAATCAAGAATGAAAAATCATATGGGAAGAATTCC Gene GeneID:100337082|LOC100337082:XM_002690056:39_cdna Constitutive 2 NULL GeneID:100337082 9 GENE LOC100337082 NULL synaptosomal-associated protein, 91kDa homolog-like EMBV3_17602 GCAGGTGAAGATGTGCAGGTATCTGTCATGTGTGCAATGAGTGAAGAATATGCTGTAGCC Gene GeneID:506307|EIF5A2:XM_002684923:59_cdna Constitutive 0 NULL GeneID:506307 1 GENE EIF5A2 NULL eukaryotic translation initiation factor 5A2 EMBV3_29060 AAGTCTTGAAGGAGAAGGCTTGATTTGGGGTGAGTGGAAGGGCTGGTGAGATTGCCAAGT Gene BVV0102_225513 + 0 NULL GK000019.2:51659511-51665457 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16718 CACTGTGCCATTGTATTCTGCTTAGTCTCCAAAATGTCCAAGACAGGCTCAAGTCACAGG Gene BVV0102_432272 + 0 NULL GK000018.2:56398084-56404236 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18077 CACCTTGGGAAGGAGATAAGTGTCTCTGGATGGTTCTGAGGGTCTTTGTCATGTGCACTG Gene BVV0102_296734 + 0 NULL GK000007.2:22561850-22569682 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212491 TCONS_00216098 2 XLOC_130202 XLOC_131168 Coding TCONS_00216098 XLOC_131168 NonCoding NonCoding LINGO3 7:22555423-22564085 x TSS161253 2889 1 TCONS_00216098_7 186 0.111457251644168 2 0.666666666666667 9.5410867301397e-05 0.000696216214990061 0.0005509476354053 0.000688170074946309 0.000254901819190692 0.000143854956959471 0.000161071526323688 0.000534693010575472 0.000158834023230171 6.66633120257598e-06 1.62595905458877e-09 2.47527054058181e-06 1.51491758984095e-05 0 0 0 0 0 0.000429961193290751 0.0010883238079708 0.000158924933924825 0 3.61730342912652e-06 3.42793346110587e-12 0.000289449674332289 0.000687878317036737 9.90518081711382e-05 5.0279340211387e-06 0 2.19638817940839e-19 XM_005199002.1 LINGO3 PREDICTED: Bos taurus leucine rich repeat and Ig domain containing 3 (LINGO3), mRNA. 0.0 4340 100.00 0.832467982000692 NM_001101391.1 LINGO3 Homo sapiens leucine rich repeat and Ig domain containing 3 (LINGO3), mRNA. 5e-74 284 73.72 0.152301834544825 0 noncoding 1 1 1 1 -0.0976195873372813 0.472689079460672 0.0245200834600639 0.640620155408122 GTGGGAGGGGACAAGGCATGTTGGTTCATGTTGGGGTGGGGGCAGGCAGAGGGGGGCTGGGAGATCCCGATAACACTGACGTTCTATGAGTCCTAACACTGTCCTAACACTGTCGAGAACATACTCCCTCTCGTCATGATGATGCTAAAGGCACTTGGATGTCGTTTTTTGAGGGACCCTCAGGGTTGTCATGGCAACCAAGGTCAGGCGGATGCTAAGGGAAAAAAAAAACTAGTCCATTCTGTTCGACTCTGTATGGGGCTGCTGGACACCCCATTCGGCTCTCCCCACATCCTGCCATGAACGGGGTTGGAGTGGGGGTCCCCACCTGGACTGGCTGTGGTCAATAGCCTGCCACTCTGTCCTGTTGGCCCACAAACACAATGTGGGGCAGGACCAGGGCCTCCTAATGTTTCTAGCCCAGGAAGAGTGGCCAGTGTCCATTCCCAAGTTCTGTCTGAATCCTTTGCTCAAAATTGCCAGGGTAGACACTTTTTTCCTCTGGCTTGTCTCAGAAAGACCTTGAGGAATCCAGAAAACAGGTCAATCATCAAGCTTGTCCATGGGCCTGGCCTCTATGTATGGAGGAATAGGTTTGGCCATCAGACTGATTTTATAGACGTGGACATCAATGGCCTTCAGTTGCCAAGCAAGATTACACAGCTGGGTGAAAACAGAGCCTTCTTACAAGGTCCGTGAGAATACTGTCTAACCTGGTCAGTAGCCAAGCTCCTCTCTGGCTGAGGTCTGGCCCCACAACACTTCCTGTGCCCCTTCCCCCCAACTGTTTGTCTGGCCGAGGTAGAAAGAGTGGGGGCAAGGACCAGGCTAGGGGAGGCAGGGTCATGTATGGCTCCTGTTTGGCATCTGAATGCTTATGCAAAACCTCAGCTCCTGCTGCACATCTCCAGCGACAGGGAACTCACTACCTGTAGAGCAACAGGGCAATGACCTTGGGGCAATGACCTTCTTTCACCTGAGCGACAGTCTTCCTGTGACTCTCCACTCACTGGCCCTAGATCTGCCCCAGTGTTGCAGAGACAAAGGTGCCTCTGTCATCTCCTAATGTCCCAGGTTTGGACTTCCTTGTGGCTTGAACCTCTGTTCCATCCTTGCTCGCTGTCACTGCCCCCACAGTGCACATGACAAAGACCCTCAGAACCATCCAGAGACACTTATCTCCTTCCCAAGGTGAGCAGTGGTCATCAGGGCAGGGGTGGTGCAGACTCAGGACTGAAGGTCATGCCATCTGGCCTGCTGGAAAGGGACATACTGGAAGCAATGCTCCTGGACCAGGGGCCAGGACAGCTGTCCCTCCGGGGTGGCGAGGGCACAGGAAGCAAGCAGCAGCTGAGGGATGGTGGGAGGAACTGGAGGAATGGCTTCTCCTAGCTGGCAGCCCGTCTTGCGGGGCTGGCAGGTCCTGGTGGGAGGGAGTCTGGGTACAGGGACTTGGGCCAGCAGGTCAGGGGCCATCCTGTGTGCTGGACCCCTTCAGGGTGAGCCTGACCAGCAAGACCTTAGCTCAGCACCTGAGGTCTGCATCAAGTGGCCAGCTGAGAGGGAGCCAGGGAACGTCTGGGTGTGAGCAGAAACAGGTCTCAGGTGTGAGCTGCCTGGCCGAGGTGGGAACTGGTCTCTACCAAGAGCCCAAAGCGCCCGTGGTGATCTCGGGGCACCTGCTTAGTGTCAGCTGGGTATGAGGGGGGTGTGTGTGTTCCCCTCTGGATCTGTGCATCGTGGTTGTATGTCCTGGGTGTAAGTATGTGCTCTGGTGTAGTTGGAGGCGGGTATCCAGGTGTGAACGGAGTGGGCTCTCTCATGCTCTGACCCGGAGGCGGGACTGCCTTCCCTGGGATCCCAGGTGTAGACCATCTCCACCAGGTGTGAGTTGTTTTGTGTTGAGGACCCTGGATCTCTGAGCTCCCATCCCACCCTCTCCCAGCTGAGCAACCACACCAGGGGCAGGAAGACAGGGTGACACCCTTAGAAAAAAACGCTTGAGAAACTCTGCAAAAGACGCATCCTGATGAAAAAACAGTTCTGTGGTTGGGTCCCTACAAAAAAACGGGGAAGTTCTGCCAGGAGTCGGCTCGCGGCCGCCCCCTATGGGAGATGCATAGGTGGTCTTCAGATGGGCCAGCCGCCATCCGGTGAGGGCTCGGACGGAGACGGAGACGCTGCTTCCGGCGCAGGCGCAGCGGCTGGGGCCGCGGGCGGTGGGCCCTGAGGCCTCTCATATCATCTTCATGTTGAACTTGCGGGCGCCCCCCTGGCCCGCCGCGGCGGCGGGCCCGTCCACCTTGCGGAAAGAGTACTCCACCGAGAAGTTGTTCTTGTGCTGCCCGCGGCCGCGGCTCCACACAAAGAGCAGCAGGAAGCAGAAGAGGACGACACCCAGGAAGGCAGGAGAGAGTCTTGGCAGTTCATCCGGCTAGGATTCAAAACACAGCGCTGTTTTCACTGGACCTGCAATGCTCGTTTCCTCTCATTCATCGATTCCATCCACCTGTCAGTCAACAAACGTCTACCGTGCCAGGCATCTTCCAAGTGCTGGGGACACAGAGTGCCTGAGACAAACAGGTCAGCTTTCTGGGAGCCGACAGATAATAAAAGAGGTAAATACAGGCTCTTCTACCTCCGGCGGCCATAAATGAAGAGGAATAAATCAGGAAGATGACAGCGGGGTGTCGAGGGGATTGTAATCATTATCATCAATTTACTGAGGAAAGATGGTGTGCAAAGAGTTAGGGAGGGAGAGAGGGGGCCTAGCAGATGGGGGGCAGCAGGACCGGGCCAATCAGCCCAGGAGGCTGGGAGCAGGCACTGTAGAGAGAGGAAGGTGGACTTTCTATCTACAAACTTAAAAAATATTAAAAAAAATTTTTT TCONS_00212490 r 5' 4164 TCONS_00212490 r 5' 0 EMBV3_36461 GAGAAGGCCACGGAGGAAGCTGTTCATGTTGTGGAGGAAGTGGTGAAGGAGGTGATAGAT Gene GeneID:781772|LOC781772:XM_002698939:26_cdna Constitutive 0 NULL GeneID:781772 28 GENE LOC781772 NULL similar to RIKEN cDNA 2200001I15 EMBV3_09390 GGCCTGTCGAGTATGGGATGTATTTTGCAGAGATGGGGAGGAATTTTTATTTAGGACTGG Gene GeneID:509093|TBC1D12:XM_002698390:283_cdna UTR3_Alt 2 NULL GeneID:509093 26 GENE TBC1D12 NULL TBC1 domain family, member 12 EMBV3_05262 TGGTGACTGTTCGTGAAGCCGCGTTACAGGGTACTGTGCATGCCTGCTGAGGAGTTCAGA Variant GeneID:539651|SETD6:NM_001098102:381_cdna 828^970 1 EMBV3_43687 GeneID:539651 18 GENE SETD6 MGC152257 SET domain containing 6 EMBV3_30397 TGCAAATTTAGGACAACTTGTTCTATATATTTGTTTACTTGATGTAGATGATAGTCATAT Control NULL NULL 0 EMBV3_07824 NULL NULL NULL NULL NULL NULL EMBV3_03990 TCTAGAGGCTACAAGCCACAACTGCTGAGCCTACTCGAGATAACTACAGAACTGCGCTCT Gene BVT0102_165561 + 1 EMBV3_05234 GK000011.2:56642387-56969006 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00031924 1 XLOC_018169 NonCoding TCONS_00031924 XLOC_018169 NonCoding NonCoding - 11:56738063-56738678 - TSS22923 615 1 TCONS_00031924_1 75 0.99349593495935 1 0 0.000707938637857071 0.00182995958333618 0.00164013922041093 0.00221443768665989 0.000144502807963861 0.000221021274777911 0 0 0 0 0 0 4.66549293247635e-06 0 0 0 0 2.44789402447361e-05 0.000151580567131523 3.50802594102602e-05 0.000404763725695881 0 0 0 0.0017799999385611 2.29121027810883e-05 0.000352501020448467 0 0 0 XM_002701561.2 PER3 PREDICTED: Bos taurus period circadian clock 3 (PER3), mRNA. 7e-45 185 74.47 0.523577235772358 NM_001167912.1 VEPH1 Homo sapiens ventricular zone expressed PH domain-containing 1 (VEPH1), transcript variant 2, mRNA. 8e-06 55.4 75.00 0.128455284552846 0 noncoding 0 0 0 0 -0.0295424536160747 0.838426846136644 -0.0153398537314604 0.790516114145427 TTATCTCTTAGTTTCCACAGGTCAGGAATTTGGGGCAAGAGTTAGCTGGGTCTTTTGCTCAGAGTTTCATCATGCTGAAATCAAGGTATTGTCCAGAGCTGTTGTCTCATCTGAGTTTTTTTTCTTTTTTTTTTTTTAAGATTTATTTAATTTATTTTTTGGCTGTATTGGGTCTTTGTTGCTGCATGAGGGCTTTCTCTAGTTGTGGCAAGCAGGGCCTACTTTTTGTTGCAGTGCCCTGGCTTTTCATTTTGGTGGCTTCTTGTTGCAGAGCGCAGTTCTGTAGTTATCTCGAGTAGGCTCAGCAGTTGTGGCTTGTAGCCTCTAGAGAGCTGGCTTAGAGTTGTGGCACTCAGGTTTAGTTGTTCCATGTCATGTGGGATCTTCCCCAACCAGGGATTAAACCAGTGTCCCTTGCATTGCAAGGTGAATTCTTAACCACTGTGGACCACCAGGTAAGCCCTCATCTGAGGTTTTAAAGCTCATAAGTTCGTTGGCAAAATTTTATTTCTTTAGGTTGTAGGACTGAGACCTTCAGTTCCTAGAGGTCACCCCTCTTCACAAGCAATTCACATTGTGGCAGTTTTGCTTCTTTCTCCAGGCCAGCAAGCATCA TCONS_00027942 . 5' 95678 TCONS_00027942 . 5' 95678 EMBV3_01869 GCTCATTATGCTCTGGGGACCATGTCAGGAACTCTGAAGAAAGAAGAACCAAACACTCAG Gene GeneID:536148|SFRS17A:XM_002699478:70_cdna Constitutive 0 NULL GeneID:536148 X GENE SFRS17A NULL splicing factor, arginine/serine-rich 17A EMBV3_17061 AAACATGGGAGAGATGGAGCCCACCTTTTATGTCACCCTTTATGGCACCAACGCAGACTC Gene GeneID:100336789|LOC100336789:XM_002697819:461_cdna Constitutive 0 NULL GeneID:100336789 24 GENE LOC100336789 NULL lipase G-like EMBV3_33774 GGATCTGGTGTGGCTCAGAAAGTTACTCAAGACCAGTCAGTTTTATCCAGCCAAATGGGG Gene GeneID:789653|LOC789653:XM_002707890:261_cdna Constitutive 0 NULL GeneID:789653 10 GENE LOC789653 NULL similar to TRD@ protein EMBV3_11830 GAAGAGAGACGTGCTAAACAGACAGAACTGCGGCTTTTGGAACAGAAGGTTGAGCTTGCG Gene GeneID:100296970|LOC100296970:XM_002696737:66_cdna UTR3_Alt 2 NULL GeneID:100296970 21 GENE LOC100296970 NULL similar to pinin EMBV3_05150 ATGATAGATTATTCCAGGGAATCTGCAGTGGAGTCAGGAGTTTCTGGTTCTTGGCCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14517 ATAGACCATGGACCAAAAGAACTTCTTAGAGTTGGAAGGGCCTAGAGTGCCCTCTCATGC Gene GeneID:280936|SV2A:NM_173962:10_cdna Constitutive 2 NULL GeneID:280936 3 GENE SV2A KIAA0736 SV2 synaptic vesicle glycoprotein 2A EMBV3_19303 AGGGAAATTACAGCCCGCAATGAGCAACTTGACCTGCCCTATGAATACCTAAAGCCCAGC Gene GeneID:407169|ALOX12:XM_002695778:278_cdna Constitutive 0 NULL GeneID:407169 19 GENE ALOX12 12-LOX arachidonate 12-lipoxygenase EMBV3_25354 TTTGAATCAACTGATGAGACAACTGCAGAGGAAAGACAAAGATGTGCTGGAAGATAAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16055 CCATCCTGAACCCCAGTTCTTAAACCACTGGACTACCAGGGAAGACTGAGAGAGTCTTTT Gene BVV0102_136903 - 0 NULL GK000020.2:46794455-47889186 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43346 AGAAAACGCACTCTTTTCTGGCGGCCCAACTTGGCCCAGAACTACTCAGGAAATACCCGA Gene GeneID:100337349|LOC100337349:XM_002695941:366_cdna Constitutive 0 NULL GeneID:100337349 19 GENE LOC100337349 NULL homeobox B8-like EMBV3_16617 AGGTGGGGATAGTGGGCTACGGCCGCCTCGGCACCCTGACCTTGTGGTGGAAGTGGCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42592 TGCTTGACAAAGACCAGCGAGAACGGCGCGGTCTCCAGCATCAATTCACGCTTTGCCAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31820 CCAGTTTATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAAT Gene GeneID:539860|SETD2:XM_002697109:16_cdna UTR3_Alt 2 NULL GeneID:539860 22 GENE SETD2 NULL SET domain containing 2 EMBV3_19399 CGGAGCAGTTATGTAAGAGAAACATTTCAGGACCCCAAATAATCAGCAATGCTCAACAGC Gene GeneID:767922|DRAM2:NM_001076996:206_cdna UTR3_Alt 2 NULL GeneID:767922 3 GENE DRAM2 MGC128340 TMEM77 DNA-damage regulated autophagy modulator 2 EMBV3_35016 ACTCCACGGAGCACAAGCAGCAGCAGGAAGGGGTGTGTGCACCCAGGCTCCCTGCTACTG Variant GeneID:505427|MAP3K12:XM_002687238:108_cdna 347^530 1 EMBV3_35496 GeneID:505427 5 GENE MAP3K12 MGC151798 mitogen-activated protein kinase kinase kinase 12 EMBV3_14769 AGATGGTGTGGGGGCTCCCTGCTCATGGTCATCATGCAGTTAACTTCTTCCATCTGGTAA Gene BVT0101_034166 + 1 EMBV3_12987 GK000012.2:76735456-76758753 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037292 TCONS_00037297 TCONS_00037286 TCONS_00040938 TCONS_00037299 TCONS_00037295 TCONS_00037296 TCONS_00035680 TCONS_00035675 TCONS_00035674 TCONS_00037294 TCONS_00035679 TCONS_00037293 TCONS_00037300 TCONS_00035676 TCONS_00035678 3 XLOC_021352 XLOC_024750 XLOC_020968 Coding TCONS_00037299 XLOC_021352 Coding Coding - 12:76724494-76742065 - TSS26948 5826 4 TCONS_00037299_8 113 0.617919670442842 5 0.668696642003415 0.00108607240391426 0.000584485779713726 1.86850561954068e-07 0.000519542362725803 0.0002411271233417 0.000174010683895097 0.000558189080895581 0.000479976911683683 0.00051400066000886 4.91305130994023e-05 3.62407368134271e-05 1.8669102568165e-08 1.4149919261787e-05 0.000155254192711607 0.000779379848666674 4.34291143949694e-09 0 9.10659895062794e-12 0.000712300154702628 4.242386186706e-09 4.98729222661059e-14 0 0 0 0.000894661175010931 0.000862501053245715 1.71028895819655e-08 1.21022019523332e-05 4.45081679445472e-10 1.53948527502752e-24 XM_003585566.2 LOC100336232 PREDICTED: Bos taurus multidrug resistance-associated protein 4-like (LOC100336232), partial mRNA. 3e-105 389 90.18 0.0487469962238242 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 1e-122 446 66.79 0.277548918640577 TCONS_00037299_4 sp|O15439|MRP4_HUMAN MRP4_HUMAN Multidrug resistance-associated protein 4; 5e-50 172 80.85 0.939393939393939 0 noncoding 1 0 1 1 -0.388417805223429 0.0410679342779144 0.0367615125835988 0.563767249355537 ACAAATTTTGATCTTTCTTCATTTAGGGTGGAAGGGAAGAAAACTGCTGAGCTGGTAAGATGGCCACACAAATAGCTACACACTTATGGGTGGGAGCCCAACGTTTTGTTCATTCAGTCCTGCAGTCATTCATTCATTCAAACAGCACATTCTAGGCAGTTTTGCTGCACACTGTCCATGCACCAGTGAGATAGTCATGCTGGACTTGGGCTTGAGTCCAAATCAGGATTCATCACTTACTGATTCAAAGACCCTGGACAGATGCTGTCCTTGAGCCTCATCTTTCTCATCCATAAAACAGGGATAATACCTTGCTGAATAGGGTGTTGTTAGAGTTAAAGGTGAGGGAAGTTCCCCAGAAATATGCATGACCGGTGTTCTGTAACATATGCCACTGTTACTTGTCTAGGCCCTGAGCTCATGATGAAAGACATCATGAGACAGCCTCTCTCTCCTCAGATTTCCTTTTCCCAGTCTACGAGGGCAGCAACAAGCTCACAGAGGTTCCCTGCACAATGCAGCATGTAAGATGCCAGAAAGCTGCCCCCATTAACACCAGGCATTCATCTTCCAAAATCATCTGAGTTCTTCTTTCTGTTACTTTTCATTAGGTCTTGCAGCTCTACAAACATAATCTGTGCTAAACTCTGTTGTTGTCCGAGGTCAAAAAATCTATTGGAGTTTGGAGCAAAGAAAGGTTTATTGCAAGAGTCAAGCCAGGAGTTCATGCTCAAAAAAATGCAAACTCCCTGATGGATTTCACGGGAGAGTTTTTACAGGGAAGGTGAGGGAGAAAGTGCAGTGTAGGTTTCCCTCATTATTCTCTGATTGGTTGATGATGAGGTAACAGGGTCATGTCACGGGGTTTAACATCTTCAGTCCTCAGGCTCCAGATGGTGTGGGGGCTCCCTGCTCATGGTCATCATGCAGTTAACTTCTTCCATCTGAGAGGACCGCGCTGTGTCTGAGCCTCCAGCCTCCCCGCCGGCGCCTCCAGGAGCAGCTCCATCACCAGAGCAGCGCGACCCCGGCCCGCGGCCGCCTCCACCGGCAAGATGCGGAAGCCCAACCCGCTGCAGGACGCGAACTTCTGCTCGCGCCTGTTCTTCTGTTGGCTAAACCCCTTGTTTAAAATTGGTTACAAACGAAGATTAGAAGAAGATGACATGTACTCTGTACTTCCGGAAGATCACTCCCAGCACCTTGGAGAAGAACTACAAGGGTACTGGGATCAAGAAGTTTTGAGAGCTGAGAAAGATGCGCGGGAGCCTTCTTTAATGAAAGCAATCTTTAAGCGTCACTGGAAATCCTATTTAGTTTTTGGAATTTTTATACTTCTTGAGGTTAAAACATAGTGTTGTGGAAGGAGAAGACATTTTATACCACATTATGATATTATTGATGGTCAGTAAATAACATAAATGCTGAAAGTGATCCTTGACCAAAAGAATATACTACAAGCTCAAGAAATGTGGTTTGGAGGACGTAAACTTGGACCAGAGCCCAGATAACATAAGACGTTTTACAGGTGCTCAGCAAGTAATTGTTAAGTTGCCCAGTTCACATCTGATAAATGCTTTCCTAAGAAGGGATCGTCATCTCTCCCCTCCTGTGATACCGAACCCATGGCCCTGCATTTGGGCTGGAGCTCCCAGAGCTCCCAAGAGTACACCCTTCCCTGGGCTGCCTGCCTCCTTCCCTGTAGGCTGGGTCACCCAGGCCAGAGCTCCCTGTGATGAGGAGCTCCAGCTTCATCATTGAATTGCAGAGACTCCATGCACCATCCATGCTGGTTTCTGTCCCTGGATGTGGGGTGGTTTCCTGCATGAAAGGGGATCCTGGTAGCCTGGCATTAGCAGAAGGTGTAGGAGAGGATGTGGAGTAGACAACCAGAGACAGAAAGCAGTGAGGTCAGTGACCTTCATGACCCTGAAGATCCTGGGTCAAGATCCCTCAGAGAGACAGTTCCAACCTGGGGACACAGTGCCATCAGCCCATCTATTCTGGCTGAGCCTACTCAAGGTCTACTGCAGACCCACTTGGGTGGCTTGTGCTCTCAGTGGTCCCTTAGTTCTGCCATAGGGACATGGGTGGCCTGTGAGTGTGTGAAAGCAGAAGGGATGGAAGATGCAGGTGCTGTGAAAGGGGTGGAGAAGGTGGTGAGTTGTCATAAGTCCATTGTGTTGAGGATAAAGTGGGTGGGCCAGGTGGTTTAGAGTTGGGGGGTGTGGCTCTTGTTTAAAGGTTGTGTTGTACCAGAGGACACTGTGGGTAGCAGGCAGCAGAGTAGGTGAAGTCTGCCCCACACAATTGGAGAGACCAGAGAATCTGTCAGCTCACAGGTGACTTAATGGTCCTGGGAGATGGAGTCTTTGATGACAAAGGTGGGTTGACCATTGTGTCAGAGAGTGGGGACAGGTATGTGGGGTGGAGTGCCACCTTTGAGAGGGCATTGATGACTGAGATACTGCAGTGCCTTGTGAGGGCAGGGTGGAGTGTTGATTTCAAAGTTGTCCAGCCCAAGTAATACTGCCTGCTGGGGATCTAGGAGGGTGAAACCTCTTTCAGGAGGTTGGTTGTTGGTCAATCATGGCAGAGAAGTGGGAAGTTGAGGACCTGGTAAATGTGGGGGCTCATTTTCTGTAGTATTAGAAGTACTAGTAGCAGATAACAAGAAGGTGGAGGAGTAGGTGGACCTGGAGTACATCTCTCTCCATGATACATCAGGAATACACTTTCAGGAATACATCAGGAAGACACAGAAGTGCATGCAGAACACCAGCTGAGAGTGGACAGGAGTACCTGGCCAGTGGAAAAGAATATATAGAGCCACACAAAACTTGAGATCAAGCCCCGAGGCTTTGGAGTGGGTGCACTGACTCCACGACCCTAGTCTACCAGAAAACTAACCCTAGGGAGTATCAAATAGTGAGAACTCACAACAAAGGAAATCACTTGAATACAAGGCCCAGCATCACCCAACCACCAGTAGCACTGTGTGGAGGATGCCTCATTTAAACAACAAACAAAACAAACATACAAACCCAATCATCAGCAGACAGGATTACCACCTCACTCATCCTTGCCCATAAGAGGAAAAACAAACAAAAAAACTCAGCACAGATCTCCCCTATATGAAGCTCACACAAACCACTGGACCAACCTTAGGAGGGCAGAAAACAAAAAGAAGAAAGAATTCAACCTTGAAGCCTGGGAAAAGGAAACCTCAAACACAATAAGTTAAAAAAAAAAATGAAAAGGCAGAGAAATGCTACACAAATGAAGGAACAAACTAGAAAAAACAGAAGTCCAAATAAATGAAGAGGAAATAGGCAAGCTACCTGAAAAAGATTTCAGAATAATGATAGTAAAGATGATCAAAAACCTTGAAAACAAAATGGAGAAACTGCAAGAATAAATTAACAAAGACCCAGAAGAATTGAAGAATAAACATTCAGAGACAAACAACACAAATACTGAAATTAAAAAATACTCTAGAAGGAATCAATATCTGAAGCAGAAGAATGAATCTGTGAGCTGGAAGATAAAATGGTGGAAATAACTTCTGAAGAGCAGAATAAAGTAAAAAGAATGAAAAGAACTGAGGATAGCCTCAGAGACCTCTGGTACAATATCAAACCCACCAACATTCGAATTATAGGGGTCCCAGAAGAAGAAGAGAAAAATAAAGGGTATGAGAATATTTTTGAAGAGATTATAGTTGAAAATTTCCCAAACATGGAAAAGGAAACAGTCAAGTCCAAGAGGCACAAAGAGTCCCATACAGGATAAATCCAAGGAGAAACATGCCAAGGCACATGTTAATCAAACTAACAAAGACTAAACACAAATAAAGACTATTAAAAGCAACAAGGGAGAAGCAGCAAGTAACGTACAAGGGAAACCCCATACACTTAACAGCTGATCTTTCAGCAGAAACCCTGCAGACCAGAAGGGAATGGCAGGATATATTTAAAGTACTGAAAGGGAAAAATCTACAGGCAAGATTACTGTATCTATCAAGAATCTCATTCAAAACTGATGGAGAAGTCAAATGCTTTTCAGAGAAGCAAAAGTTAAGAGAATTCAGTACCACAAAACCAGCTTTACAACAAATGTTAAAGGGACATATATAGTCAAGAAATACAAGAGAAGAAAGAAGATCTACAAACTCATTCCCAAACAGTTAAGAAAATGGCAATAAGACATACATATCAATAATTATTTTAAATGTAAATGAATTAAATGTTCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAAACCCACTTCAGCCCTAAAGACACATATAGACTGAAAGTGAGAGGATGGAAAAATATGTTCCATGCAAATGAGAAGCAAAATAAAGCTGGAGTAGCAATCCTCATATCAGACAAAATAGACCTTAAAAGGAAGATTACAAGAGATAAGGAAGGTTACTACATAATGATCAAGGGATCAATCCATGAGGAAGACATAACAATTGTGAATATCTGTGTAACCCAACATGGGAGTACCTCAATACATAAGACAAATGCTAACAGACATAACAGGAGAAATTGACAGTAACACAATCATAGTATGAGACTTTAACCCCCTACTCACATCAATGGACAGGTAATCAAAACAAAATTAAGGAAGTACAAGTCTTAAATGATAAATTAGATGAGATGGATGTCATGGATATCTTCAGGACATGCCATCTGAATGCAGAAGAATACACCTTCTTCTTAAGTGCACACAGAATATTCTCCAGGATAGACCACATCTTGTGTCACAAATCAAACAGTAAATTTAAGAAAATTGAAATCATATCAAGCATTTTCTCTGAACACAATGCTATGAGGCTAGATATCAATTACAAGAAAAAAAAAAAACTCTCTAAGAAACACAAGCACATGGAGATTAAACAATACGTTTCTAAATAACCAACAGGTTACTGAAGAAATCAAAAGGGAAATCAAAAATTTCTAGAAACAAATAACAATGAAAACAACAACCCAAAACCTATGGGATGCAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCAATATAATCCCACCTCGAGAAACATTGAATAGATAACCTAACTTTACACCTAACACAACTGGACAAAGAAGAACAAGAAAATGCCCAAATTAGTAGAAGGAAAGAAATCATAAAGATCCGAGCAGAAATACATGAAAAAGAAATGAAAGGAACAATAGTAAAGATTAATAAAACTAAAAGCTGGTTGTTTGAGAAGATAAACAAAATTGACAAGCCTTTAGCTAGACTCATCAAGAAAAAAAGAATCAAATCAACAAAATTAGAAATGAAAAAGAGGTAACAGCAGAGGATGCAGAGATACAAAGGATTATAAGAGACTATTATGAATAACTATATGGCAATAAGATGGATAACTTAGAAGAAATGGACAGATCCTTAGAAAAGTTCAATCTTCCAAGACTGAACCAGGAAGAAATAGAAATTATGAACAACCCACTTATAAGTACTGAAATTACTGAAATTGAAGCTGTGATCAAAAATCTCTCAGAAAACAAAAGCCCAGGACCAGATGACTCCATGGAAGAATTCTTTTAACATTTACAGAAGAGCTAATGCCTATCCTTCTAAAATGCTTTAAAAAAATTACAGAGGAAGGAACACTTCCAAACTCATTCTATGAGGCCACCATCGCCCTGATACCAAAACCAGACAAAAACAACACAGAAAAGAAAACTACAGGCCAATATCACTGATAAACATAGATGCAAAAATCCTCAACAAAATTCCAGCAAACAGAATTC TCONS_00035693 r 5' 29777 TCONS_00035693 r 5' 16689 EMBV3_14232 GCACTAGCGAAGAGGACGGCATGGTGGGCACCCTGGAAGGAGCACCTCTATCAGCTGGAG Variant GeneID:506560|C12orf10:NM_001035038:18_cdna 476^810 4 EMBV3_07347 GeneID:506560 5 GENE C12orf10 MGC134440 MYG1 protein EMBV3_16218 CCACGGGACTGCTGGGAATGGCTACTCCTTCCTTTCCCTTTACCACATCACACAGGATAA Gene GeneID:541142|LANCL2:NM_001102256:44_cdna Constitutive 3 NULL GeneID:541142 22 GENE LANCL2 MGC148337 LanC lantibiotic synthetase component C-like 2 (bacterial) EMBV3_22943 AGAAGCACACAGCCTAGCCAGTCCTGGACCCCTGCCTCTCAGAAACCACCAGCTAATAAA Gene GeneID:514934|CCDC94:NM_001075691:33_cdna Constitutive 0 NULL GeneID:514934 7 GENE CCDC94 MGC139965 coiled-coil domain containing 94 EMBV3_23584 AGCCAGCAGGTAGCAACCCTTAGCTGAAGTCGGGTTGGCTGGAGAAGAGTCATTAGGAAA Gene BVV0102_177073 + 0 NULL GK000004.2:14354674-14364654 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186058 1 XLOC_112111 NonCoding TCONS_00186058 XLOC_112111 NonCoding NonCoding - 4:14363175-14364155 - TSS138426 980 1 TCONS_00186058_2 135 0.58469387755102 1 0 0 0 0.000297449814396601 0.000415207783117946 7.05311990737745e-05 0.000107068598980671 0 0 0 6.99743408536047e-07 0 0 0 0 3.00379544185689e-05 0 0 0 2.92690573685085e-05 2.93527103286674e-05 0.000102223136346655 0 0 0 1.41397527239431e-05 0 0.000239148410706441 0 0 0 XM_005200861.1 GYG2 PREDICTED: Bos taurus glycogenin 2 (GYG2), transcript variant X1, 1e-75 288 91.67 0.206122448979592 0 noncoding CTGTGAAGTCGCTTCAGTTGTGTCCGACTCTGTGTGACCTCATAGACTCATTGGAATTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAAGCAGGAGGAGAAGGGGACGACAGAGGATGAGATAGTTGGATGGCATCACGGACTTGATGGACATGAGTTTGAGCAAGCTCCAGGAGTTGGTCATGGACAGGGAAGCCTGGAATGCTGCAGTCCATGGGGTCACAAAGAGTCAGAATGACTGAACAACTGAACTGAACTGACTGAGGACCAAAGTTGATCATGGCAGAAGCAGAAACACAAAAAGTTACTACCACATCCAATAAACAGACGATAGTGGTGGAGGGACTAGTGAGAAGTGATCAAATTCTGCATACATTTTGTTGGGGGAGCCATCAGAGTTTGTTGAAGGACCAAACGTGATGGGACAGAAAGAACGAGGCCAAGTTGCTGCCAGCTTTCATTGGTCACACTCTATAGCCTTTGTAAAAGGTGAAGATTTGTGTACCTCCCGATTCTACATTTTCCTCTCAGACTATTTAATCATAATCTCCAGTATCATGGCCTTGGAAACAATACATTTAAAAGGTTCCCTAATGATTCTTCTTCAGCCAACCCGACTTCAGCTAAGGGTTGCTACCTGCTGGCTCAGGTCTCACTTGAGTTACAGGAAAGTATCCACTCCTTTGGGGCACAAATTAGGAGCACAACACTGCAAGGTACGTAGGTGGTTGGGCTTGTGGATGAAGAGATTCATCTCATTGCTTGAAGGCAGGAACACTCTGCTGCTAAGTCGCTTCAGTCGTCTCCGACTCTGTGCGACACCATAGACGGCAGCCCACCAGGCTCCGCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTTCTTCTCCACTGCATGAAAGTGAAAAGTGGAAGTGAAGTCCGACCCTTAGCGACGCCATGGACTGCAGCCTAGCAG TCONS_00180883 TCONS_00180881 TCONS_00180882 . 5' 175 TCONS_00180883 TCONS_00180881 TCONS_00180882 . 5' 175 EMBV3_41948 CTGCGTATCAGGGCAGCATTCTAGGATCCCACGGCTCTCAGGTGAACTAAGCACAACTTT Gene GeneID:781423|ZNF474:NM_001037490:37_cdna Constitutive 0 NULL GeneID:781423 7 GENE ZNF474 MGC133506 zinc finger protein 474 EMBV3_09275 CACTGCCTCCCTTTGGATTATGGAAAGTTTCTTGTATGTGATATCGGGGTATGGTGTGTG Gene GeneID:539357|VPS4B:NM_001076156:164_cdna UTR3_Alt 2 NULL GeneID:539357 24 GENE VPS4B MGC139102 vacuolar protein sorting 4 homolog B (S. cerevisiae) EMBV3_19733 CTGAGTTAGTTCTGACTCCAGGAGACCTGCCCTAGTTCGGATAGCTTCCAGTCACCTCCA Gene GeneID:535127|MYO6:XM_002690030:17_cdna UTR3_Alt 2 NULL GeneID:535127 9 GENE MYO6 NULL myosin VI EMBV3_26146 TCATGTCCATTGAGTCAGAGAAGCTGTCTAATCATCTTATCCTCTGTCACCTCCTTCTCC Gene BVT0102_106070 + 0 NULL GK000019.2:11556721-11683594 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21427 TGAGCAATGTGGGATCACAGCCGATATCAACCGGCGACAGGGACTGAACACCACTTATGA Gene GeneID:790428|LOC790428:XM_002707904:47_cdna Constitutive 0 NULL GeneID:790428 X GENE LOC790428 NULL similar to Gag EMBV3_22064 AATTTGAATTCTCACAGTTGCCCCTCAAAGTAGAGTTCCTGGAGTGCAGCGCCAAGGGTG Gene BVT0102_006657 + 0 NULL GK000001.2:136630829-136683310 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005353 TCONS_00005356 TCONS_00005355 TCONS_00005354 TCONS_00005357 1 XLOC_001245 Coding TCONS_00005357 XLOC_001245 Coding Coding LOC100138613 1:136636385-136676833 = TSS2656 1979 1 TCONS_00005357_2 271 0.0257705912076806 7 0.951244838925013 0.00122656120980281 0.000891765658422461 0.00165266093936429 0.000831295881634598 0.000640510922136472 3.07471484079756e-05 0.00126154192068879 0.000666592677266559 0.00079935349387064 0.0023634800525945 0.000998444662916101 0.000718424326379001 0.00027515153705596 0.000470636669243809 8.99162004886443e-05 0.0159557648735268 0.00706371486209607 0.0134070513107091 0.0044585983925298 0.00304417119663346 0.000971302359091353 0.00633923420206164 0.00471153625248637 0.005356448589667 0.00146943424788182 0.00177206800529871 0.00176174059061648 0.00167637739089341 0.00167251019150538 0.00436379345018701 XM_003585701.2 SRPRB PREDICTED: Bos taurus signal recognition particle receptor, B subunit (SRPRB), mRNA. 0.0 3323 100.00 0.930267812026276 NM_021203.3 SRPRB Homo sapiens signal recognition particle receptor, B subunit (SRPRB), mRNA. 0.0 1472 77.70 0.909044972208186 TCONS_00005357_2 sp|Q9Y5M8|SRPRB_HUMAN SRPRB_HUMAN Signal recognition particle receptor subunit beta; 1e-171 480 92.62 0.996309963099631 4 coding 1 1 1 1 -0.176711605929705 0.196511087436973 0.0616458506773429 0.250445793034101 AGCCCAGGGCCACGTTGCTTTTGTGGTGCCGGGTAGCGTGATCTCAGCCATGGCGTCCGCGGACTCCCGGCGGATGGGCAATGGCGGCGGTGTTGGCGGAGCCTTCCAGCCATACCTGGACTCTTTGCGGCAGGAGTTGCAGCAGAGGGACCCGACGCTGCTGTCAGTCGTGGTGGCGCTCCTTGCGGTGCTGCTGACGCTAGTGTTCTGGAAGTTCATCCGGAGCAGAAGGAGCAGTCAGAGAGCTGTTCTTCTTGTGGGCCTTTGTGATTCCGGGAAAACATTGCTTTTTGTCAGATTGTTAACAGGCCTTTACAGAGACACTCAGACTTCCATCACTGACAGCTCTGCTGCCTACAAAGTCAATAACAACAGGGGCACTAACCTGACCTTGATTGACCTCCCTGGACATGAGAGCCTGAGACTTCAGTTCTTGGAGCGATTTAAGGCTTCAGCCAGGGCTATTGTGTTTGTTGTGGATAGTGCAGCCTTCCAGCGAGAGGTGAAAGACGTGGCTGAGTTTCTGTATCAAGTCCTCCTTGACAGTATAGGTCTGAAGAACACACCGTCATTCTTAATCGCTTGTAATAAGCAAGACATTACAATGGCAAAATCAGCAAAGTTAATTCAGCAGCAGCTTGAAAAAGAAATCAATACTTTACGGGTTACCCGTTCTGCTGCCCCGAGCACACTGGACAGTTCCAGCACTGCCCCTGCTCAGCTGGGGAAGAAAGGCAAAGAATTTGAATTCTCACAGTTGCCCCTCAAAGTAGAGTTCCTGGAGTGCAGCGCCAAGGGTGGAAGAGGGGATGCTGGCTCTGCTGACATCCAGGACTTGGAAAAGTGGCTGGCTAAAATCGCCTGAGGACTAGATCCAAACACAAGATGTGAATGTGGGTATGTGTGAATGACAGTTTTGGAAAAGGATTTGGTAGTCTGGAGGGAATATTTCAAATGTAGTTAGGAACTTTTCCTTATTCTGGAAACAAATTATTGTTGAACCCAGTGTGGAATTTTTTTTTTATTAAGTTCAGTTCTCCCATACTGCTTTCAAGCTAGTTATTTGCTTTGCTTTGTGTCTTCCCTTTTTAAAGTGTATGTAAGATCCCTTTAGTATATGCTTGGTGTAAGGTCGAGGTCTAACAAGTGGACCTCACACAGAGAGGATACTATCATGAGAATATGATGTCATCTAATGTGTTTTCTTATCCTCTGCTTCTGTGCTTTGGCCCCCTTATCCTGGAAACAAAGCTGTCTTGTGTGGGTCTGGGTGATTTCCAGTTACCCTTCATGGGCAGTACATGAATCTTCAGATTTGTTGGTACAGTTACAACATGGTCTCTGGACATGTAAAGGCAGGTTGAAAACAGCAAGGCCATGCTGACAGTGGTCTGTTCTTCATCAGCTCAGTTACTTGTCCACACTCTAGCCTTGTAACACTTAGGTTTCAGAAACGTTATGAATTCTTGGAGTCATTCCTAGACGATGGAACTGTAAGTGCTAAATCCCCAAATGCTACTAAAATGTACACTAGAAATGACCATTCTAGTGGTTTCCCTTAACTACGGAACATGTGGAGATTTAGAAGCTGTTCTGTTTTTCTGATGCATGAGTGCTCCTGGGCTATATCTTTATGTGCTGTTTGATGAGCTCCTATTTTGTACTCATAGCATGAATGCTGTGGAACAAATACAAGATGAAAAAAGTTGTCTGTAGATTGTTAAAGTGCACATTCACTGATGGTTTTTTTTTAAAAGCAATTTCAAAGTGATGTTCTTTGCTATCTTTTTAAATGTATGGCTTTATAAATGGCTTTTTATAAATGATTAATATATAGGCTTCCCTGGTGGTTCAGTCCATAAAGAGTCCACCTGCAATGCAGGAGACCCACCTGAGTACAGGAGACTCTGTGCACTGAGTGCAGGAGAAATGATTAATATATTTCTTGGTAAATAAAACAGCCTGTGTATGGGGCTTCC EMBV3_36725 CAGTTCTAACTAGTATGTTGGGATGACACCACGGAGGGAAGGGCTGGAGATGTAGGGTTT Gene GeneID:539899|RYR3:XM_002690724:406_cdna Constitutive 0 NULL GeneID:539899 10 GENE RYR3 NULL ryanodine receptor 3 EMBV3_33424 GTGGATGCCATCTTTGGCTTCAGCTTCACGGGATGGGACGTGGAGAAGGGAAGCTCTGGA Variant GeneID:404132|APOA1BP:NM_205796:46_cdna 614^697 2 EMBV3_33806 GeneID:404132 3 GENE APOA1BP AIBP apolipoprotein A-I binding protein EMBV3_11660 TGTTATTAAATGAAGACCCTCTGCAGCACCAGGACACAGCCGGGAGAAGCCTGTGTGGAA Gene BVT0102_239224 + 0 NULL GK000004.2:114725192-114730381 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089391 TCONS_00182933 TCONS_00182932 TCONS_00182934 2 XLOC_054176 XLOC_111030 Coding TCONS_00182933 XLOC_111030 Coding Coding NUB1 4:114689754-114726575 j TSS136633 3207 1 TCONS_00182933_3 555 0.0632990333645151 14 0.91328082563824 0.00913220027255416 0.00576751433690372 0.00678560388545845 0.0052352385435806 0.00451476459219408 0.00353078042979271 0.00652817752957879 0.00474083380058324 0.0101728426605042 0.0015096884188661 7.34726313755659e-06 4.52877304574559e-05 0.000993055514889226 0.00155646415018139 0.00117790722349367 0.00843176441697251 6.00888653077338e-15 1.22398040713882e-05 0.0116737071317505 0.00630752969905705 0.00283462222779998 0.00118938566935445 0.00187017669173622 0.0016495586129195 0.00521561260322551 0.00387003607074733 0.00345943039721897 0.000621904914542809 0.000182096285514946 0.00113517135284793 XM_005205827.1 NUB1 PREDICTED: Bos taurus negative regulator of ubiquitin-like proteins 1 (NUB1), transcript variant X1, mRNA. 0.0 5701 100.00 0.985344558777674 NM_001243351.1 NUB1 Homo sapiens negative regulator of ubiquitin-like proteins 1 (NUB1), transcript variant 1, mRNA. 0.0 2046 84.63 0.579045837231057 TCONS_00182933_3 sp|Q9Y5A7|NUB1_HUMAN NUB1_HUMAN NEDD8 ultimate buster 1; 0.0 973 86.69 0.998198198198198 1 coding 1 1 1 1 -2.36907612231593 0.0145261046139052 -0.118905373953767 0.0862037746699203 CACTCGGCGGGTCGCGGCTGGAGCGGCTGTGGCGCAGGACCTTGCTAAGAAGTACTCTGACAAGCTAGAATGTTGTGAAAATGAAGTAGAAGAGATAATGGAAGAAATACGTTGCAAAGCAGTCGAGCGTGGCACAGGAAACGAGCACTACAAAACGACGGGGATTGCCACAATCGAAGTCTTTCTACCTGCACGGTTAAAAAAAGATAGGAAAAACTTGTTGGAGACCCACCTGCACATCACTGGCAGAGAACTGAGGTCTAAAATAGCGGAAACCTTTGGATTTCAAGAAAATTACATCAAAATTGTCATAAATAAGAAACAACTTCAACTAGGGGAAACGCTTAAGGAGCAGGGAGTGACCCACAATGTGAAAGCTATGGTTCTGGAACTAAAACAGTCTGAAGAAGACGTGAGAAAAAACGTCCAGGTTGAAGAAGAAAAGCGAAATGAAGCCAAGCTAGAAGAAAAAAGAATTCAGAGGACTAAAAGAGGACTGGAGATCCTTGCGGAGAGAGCTGAGATGGTGGTGGATCCAGAAGCCACACCATACTTAGACATAGCTAACCAGACAGGCAGATCAATCAGAATCCCTCCATCAGAAAGAAAGGCCCTTATGTTAGCTATGGGATATCATGAGAAGGGCAGAGCTTTCCTGAAAAGAAAGGAACATGGAATAGCCTTGCCATGTCTGTTGGACGCTGACAGATATTTCTGCGAGTGCTGCACAGAGCTGCTGGACACGGTGGACAACTACGCGGTGCTCCAGCTGGACATAGTGTGGTGCTACTTCCGCCTGGGCCAGCTGGAGTGCCTGGACGACGCCGAGAAGAAGCTGAAGCTGGCCCAGGAGTGCTTCAGAAAGTGTTACGGGGAAAATCACCAGAGGCTGCTGCACATAAAAGGAAATTGTGGAAAAGAGAAAGTCCTGTTTTTAAGACTTTACTTGCTTCAAGGCATCCGAAATTATCACAGTGGAAATGGTGAGGAGGCTTATGAAAATCTCAACAAGGCACGTCAACTCTTCAAAGAGCTATATATTGATCCATCCAAAGTTCACAATCTGATGCAGTTGGGATTTAGTGCCCAGGAAGCTCGGCTTGGCCTGAGGGCGTGTGATGGGAACGTGGACCACGCGGCTGTCCACATTGCCAACCGCAGAGAGGAACTGGACCAAATAAAGAAGGAGGAAAGAGAGAAGAAAAAACGCCGCCTGGAGAACATTAACCATTTGAAAGGAATGGGCTACTCCATGCGAGCAGCCAGGCAGGCACTCCATCAGGCCGCCGGGAACCTGGAGGAGGCCCTGAAGATTCTTCTCCATAATCCTCAGCTGTGGTGGTTAAATGATTCAGCTCCGGAAAGCAACAACCGTCAACAAAGTCCGTCTCAGGAAAAGATTGACCAACTGGTATACATGGGCTTCGATGCAGTCGCGGCCAAGGCGGCCCTGAGGGTGTTCAGGGATAACGTCCAGCTGGCGGCACAGACCCTGGTCCACAATGGAGGGAGACTTCCTCCCGACCTGCAGCTCTCGGCAGAAGACTCTTCGTCCACGCCGTCCACATCCCCGTCCGACTCTGCAGGCACCTCTAGTGCCTCAACAGATGAAGACATGGAGACAGAGGCTGTCAATGAGATCCTGGAAGACATCCCAGAACATGAAGAAGACTACCTTGACTCAACTCTGGAAGACGAGGAGATTATTATTGCAGAGTACTTATCCTATGTAGAGAACATAAAGTCGGCAGCAAAGAAGAACTAAGCGATGAACAGAAATAACTTAAGTTTCTGCTTATAAATATTCTATCGTTTTGAAGGTGTAATGCAGATCTTCTTCTTCCTTTTTACTGATTTTGCTGCAGAGTGCTGCTTTCTCGGGTGTAGGAGGGGCAGGTAGGGAACAGGGATGTAGAGAGTGAGAGACGGGGTGGGACAGGGTGCCGGTCCCCAGGGGTGGCCTTGGGAACTGAGCCGCCTCTGGCCTGACCTTGCTGTCGCCCGCTGCCTTCAGGTTCTGCGGCCTGAGCGCCACCCTCCCTGCTCGTGTGGCTCCCGGGGAGGGCTGCAGGAAGAGCGGCTGGGGAGGGGGAGGTGGACATGTCTCCCGCTCTTCCCCTCGCCCTGCGCTTCTGCCCTCTGGAACCCACTGCTTGGTCGTCTCCTCCGTCCCACAACACAGCCCTGCCTCCTGCTTCACCCTCTGCCGCTTCCTGAACGTGTCCCTTAGATCCTCAACTGTTTCAAGCGCTTTGGGGGCCTTTTAGAGACAAGGCATCAGCTATAGCAGCCACACCAGACCGTGACAGAGGCCTTCAGCCTGAAACAGCAGTGGTTTTTGTGCTTAGCCTAGTTAAGTAGAAGTTCCCCAGTGGCTCAGACGGTAAAGAGTCTGCCTGCAATATGGGAGACCTAGGTTCAATCCCTGGGTTGGGAAAATCCCCTGGAGAAGGGCATGGCAACCCACTCCACTAGTCTTGCCCAGAGAATTCCATGAACAGAGGAGCCTGGCAGGCTACATACAGTCCGTGGGGTCACAAAGAGTTGGACACGACGAGCAACTAACACTTAGCAAAGTAGGCACTTGAAATTCTGGGTGGAAATTCAGAATGTATATATATTCAGAATTCTTCTTTACAGATATAAAATCTTTTTATTAAACAGGAAAGTCTTAAATGCCAACCAAAGCAACTTACTTTTAATTAGCATTCTCAGATGCAGCACTGTCGTAGTAAATCCATTGCTGGCTGAGATGCCTATGAGAGATCTAAAATCTATTTTCTCCATGTCTTTGTGGGGGGCTGGGTATAATACAGAAGACTCTTTCTAAAGGTATGTAGTTACTAGCCTCCTAACTGCTCAAGTAACCGTTCTGAGTTGACCATGCCTTCCTCTGTAAACGTGTTATTAAATGAAGACCCTCTGCAGCACCAGGACACAGCCGGGAGAAGCCTGTGTGGAAAGAAACGCACGCCAGGTGTGTGCCCAAGACTTCCTGGCTGGCTGGAAGCTCCGCGACTGAGGGCAGATGGGTCACACAGTTGCCGTTGAGGGGCTGGCTGAAGTGCTTCTGCCGTGTCAGAAATCGTAAAGCTTGGACAGCAGGCTAGTGTGAACGGGTGGAAATCCTTTCTTGTCATTCTTTCAAAAATGGATGGTACAGGTGAAAATAAAAGACGGAAGATACATTCCAAAATTGTCAGCCTA EMBV3_24819 GGGAAAAGTGAGTTGGCTCAGGCATTAGGAGTCTGTGCTGAGGGTCTTACCTCACATCCA Gene BVT0102_229088 + 0 NULL GK000018.2:65689199-65699308 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085079 TCONS_00085074 TCONS_00085076 TCONS_00085078 TCONS_00085075 1 XLOC_051781 Coding TCONS_00085074 XLOC_051781 Coding Coding ZNF135 18:65676610-65693950 j TSS63622 7615 1 TCONS_00085074_7 615 0.243466841759685 6 0.561162696810658 3.23399109814315e-06 0.000276921461049515 0.000139583172522619 5.18596095359116e-05 5.22292882473761e-05 7.52633144687703e-05 3.12961137322762e-05 3.36620405092963e-12 0.000436024554565527 2.73544900035304e-05 3.53452746849887e-12 1.71718245514523e-05 3.82771029237703e-05 8.05786397560352e-12 3.81101094610986e-10 5.66765829351087e-14 8.64950442494844e-14 2.37382413181127e-12 0.000543482967540368 0.00017573685630695 8.97762423619544e-12 3.32734501811485e-14 1.19062802694944e-12 5.96477921660301e-13 4.71334996908043e-05 2.72404598704618e-05 6.46019968962348e-15 1.5037019691863e-11 7.16256578868215e-10 2.58730542677722e-14 NM_001076816.1 ZNF135 Bos taurus zinc finger protein 135 (ZNF135), mRNA. 0.0 4745 100.00 0.345370978332239 XM_005259213.1 ZNF135 PREDICTED: Homo sapiens zinc finger protein 135 (ZNF135), 0.0 2727 81.40 0.37596848325673 TCONS_00085074_7 sp|Q08DG8|ZN135_BOVIN ZN135_BOVIN Zinc finger protein 135; 0.0 1256 100.00 0.998373983739837 7 coding 0 0 0 0 -0.199163877079197 0.247013670696403 -0.037565984522508 0.581231944755492 AGGCGCAGTGCGCTCCGTGGCAGCCTCAGCCTTTGTCCTACAGTCCGGCGAACTGCCTACAGAGGAGCTGACTGTTCCTGCGAAAGGCCCGAGGAGGAGGGAATGACCGCTGGGCTCCTCACTGCCGGGGACCCGGGCTCAGAGTCTGTTCTCCCAGCTCACACTCCCTCCAGTCACTTGGCCAACGTGTGCTGAGCACTGCTCACGAGCAGGCACTGTTCCAGGTACTGCAGGACCAAGTGACTTTTGAGGATGTGGTCGTGGACTTCACCCAGGAGGAGTGGGGGCATCTGGAGCCGGCCCAGAGGACCCTGTACCGAGATGTGATGCTGGAGACCTTCGGGCTCCTGGTCTCTGTGGGACACTGGCTCCCAAAGCCGGATGTCATCTCCTTGCTGGAGCAGGAGGCAGAGCTGTGGGCAGCGGACAAGGGAGGCCCCCGAGGTGTGTGCCCAGATTTGGAAACCAGACCCCAAAGCAAGCTATCAACTGAAAATCAAGGTGTAACTGAAGAAATACCCAACAGTGCCCTGGTAGAAAGGTTCCTACAGGAAAGTCTGTGGCACTCTAAGGATGAAGGTGCTGCAGGCCACAGGGAACAGGGCCCTGAGAAGTCAGATAGCTGTGTGGTACAGGCAGCCTGCACACTTGTAAAGACACTGACAGAGGAGCAGCAGCAAGGGGATGGGTGTGGGGAAAACTTGAGTTTGAGGCCAGATCTCCCAACTCAACCAATGACTCCTGAAAGGCAGGGTGCCCCAACGTGGGGGACACATGGACAAAGGGAGAATCCAGACTCAAATGCTCAACAGAAAACCTGTGCAAAAGAGAAGCCCTATGGATGTCAGGAATGTGGAAAGGCCTTTAGTCACAGCTTAGCACTCATTGAACACCACCGAACACACACAGGAGAGAGGCCTTATGAATGTCCTGAATGTGGAAAAGGCTTTCGAAACAGCTCGGCACTTACCAAACACCAGCGGATCCACACTGGTGAGAAGCCTTACAAGTGTGCTCAGTGTGGGAGGACCTTCAACCAAATTGCCCCACTGATCCAGCACCAGAGGACTCACACAGGTGAGAAACCCTATGAGTGCAGTGAGTGTGGGAAATCCTTCAGCTTTAGATCGTCCTTCAGCCAACACGAGCGGACGCACACAGGTGAGAAGCCCTACACGTGCAGTCAGTGTGGGAAGGCCTTCCGACAGAGCATCCATCTCACCCAGCACCTGCGAATCCACACCGGGGAGAAGCCGTACCAGTGTGGAGAGTGTGGCAAGGCCTTCAGCCACAGTTCATCCCTGACGAAACACCAGCGGATCCACACTGGGGAGAAGCCCTACGAGTGCCAGGCATGTGGAAAAGCCTTCACCCAGATCACACCACTGATTCAGCATCAGAGGATACACACGGGCGAGCGGCCTTATGAGTGCAGTGAGTGCGGGAGGGCTTTCAGCCAGAGCACACTCCTGACTGAGCATCGGAGGATCCACACAGGAGAGAAGCCCTACGGGTGCAACGAGTGTGGGAAAGCCTTCAGTCACAGCTCATCGCTTAGCCAGCACGAGCGGACGCACACAGGCGAGAAACCCTATGCGTGCAGTCAGTGTGGGAAGGCCTTCCGGCAGAGCACACACCTCACTCAGCATCAGAGAACCCACACGGGGGAGAAGCCCTACGAGTGTAGTGACTGCGGCAAGGCCTTCAGCCACAGCTCATCCCTGACCAAACACCAGCGGATCCACACTGGGGAGAAGCCCTATGAGTGTAACGAGTGTGGCAAAGCCTTCAGCCAGCTTGCTCCACTCATTCAACACCAGCGGATCCACACGGGAGAGAAGCCCTATGAGTGTAATCAGTGTGGCAGAGCCTTCAGCCAGAGCTCCCTCCTCATAGAACACCAGAGGATTCACACCAAGGAAAAACCCTATGGGTGCAACGAGTGTGGAAAGTCCTTCAGCCACAGCTCATCACTCAGCCAACACGAGAGGACGCACACTGGGGAAAAGCCCTACGACTGCCAGGACTGTGGGAAGTCCTTCAGGCAGCGCACCCACCTCACTCAGCACCAGAGGATCCACACAGGAGAGAAGCCATATGAGTGCAGGGACTGTGGGAAGGCCTTCACACACAGCTCCTCCTTTATCAAACACCAGAGAACTCATACTGGGTAGGCCCACTCTGGTGTGTGTGCTGGGACCCAGCAACGCCTTAAGCCATAGCACATCACTTACTCCATTTGACCCAGTCATACTCCTGATAAACAGTACACTGTAAACAAGCCTTTGTGCTCAACACACCCTAAGACTCCCACACAGAGTTGACATTTACAGAAATGATTGTGGGAACAGCAAGCTCTGGGTCATCCATCCCAGATAGCCAGTCATCCAGACAGTAGGGAAGTGTGAAGTTAATCACTGTTGAGAACCTCCAGCCATGAGTGCCCACCAATGCTTCACTATAGAACCTACAAAAGGGAGAAATGGAAAAAATGTAATGGACATGGGGTGGCTTCTAAGAAGTCACCATATTCTAAACCAGACATTTTCAAAGTGGTGAGAAACTCAGCAAATGCCTTTCATATAAAAGAATCAGATGCAGTCAGAACTTGTCATTATTGCACATGACATTCTTCAGGTGCTTATGAAAAGTGCAAGTTGACTTTCATATTTGCTAAAACCAATATGGCAGAATGTTCCAGACATGACAGTGGCATTTTTATGGAATCATGAATATTCAAATATCTCAGCACAAAATTTTCTGATTGGTGTGTAATTGTTTGAACAAGGTACATGGCCACCAGCCTCACAAATGTGAATGCCATATGATAATTATCCATGTACTATAAACAGATTTTAAAATAGTTGTATGCATTATGTGGCAATAAGTTAATTTTTATATGTAATGGAACTGAAAGGATTTGTATAGGAAGACTTGAAAGGTAGAGCCCCTTCCACAGAATCTTGCAGATTCTGAGATGGCTTTTACTGCTTTGTTCTTGCTATAACATTTTCTACCAGACTCAAAGGCATTAGAAATGCAGATGTTGCTGTTTCACAAAAAGGTTTTATCTTTGTTAAGTCATCATCTTGGGGCCTCCCAGATGATTCAATGTTCAAGAATCCACCTACCAAGCAGGAGATGCTGTTTTGATCCCTGGGTCAGGAAGCTCTCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGAGAGATCCCATGGAGAGAGGAGCCTGGTAGGCTACAGTGCATGGGGTTGTAAAAGGGTCAAACATAACTTAGCAACTAAACAACAACAGAGCCACCATCTCATGGGCAAGTGCACATCCACGTTGGGAGCTTATGTTTTGTAAGATTTATCTCTTGAGAAATGTACAAGTTAATCTTTTTTGAGCTGTTTTTTTTTAATTGACTCTTTATCCTAGTGTTTATTAAGATTTTGTTTTTATAAAATTCAACTAGAAGGGAGTCTATAGTATTTCACTGAACCCTGAATCCACTAATAGCAGTTGCCCTGACAACCATGATCCTTAGACAGTGACTTGTCACCCTCATTAGAACCCAAGTGTAAATGGCATTGGCTAATTTTGGTAACTAACCATCAGTTAGGGTTATATCAATCAGTTTGATTTTTCAAATCACAATGCTGGAATATGTTTCCAGTTAACTTGAAATTTCTCCATTGGAGGGGACCATGTTTGCAAATGGTCTTCAATACTGTTCTTCAGTACCCTTGTGGAATGCCTCTTCTTTATGGAATTAATTTGAGCCATTTGAAAACCATTTAAGGGGATTTCCCTGGCAGTCCAGTGGTTAAGAATCCACCTTGCATTGCAGGGGATGCAAGTTTGATCCCTGGTTGGGGAACTAAGATCCCACATGCCTTGGAACAGCTAATCCTGCATGCTGCAACTAAGACCCGACATAACCAAATAAGTATTTTTAAAAATTGATAAAAACCACTTATGAATCAATACGTAGTGCATAGCAACACTCCCCAATTGAAACAACGTAAGCCAGAGATGTAAATTAAATATATTGTAGTAGTCCAGTTTAAAAAGCAAGAGGACACAGGTGAAACTAATTTACTATTTTTCCCATATATCACAAATGTTGCCACTTTGACATGTTAATATAAAAAGGCACTAATGAGATAATGTGCTTTTTCAGTATACTGTGTCTTTGAGATCCAGTGTGTTTGACATATGCAGTACATATTAATTTGCTGTGACCATGTTTCAAGTGCTCTTTTGCCACACATAGCCAGCCAGTAGCTGTACTGAACAGGGCAGCTCAAGAGCCTTGATCCTTTGGCCAGGTGTCTTTTTCCTCCCATGTATCCTCCGCTGTTTCCCTGTGCTTCTATCTTTGTGCAGTTTCTTGTCCTCAAAGAAATCAGATGTGCTGGGAAGATCGGAAACAAAGTAGTCAGAATAGAAAGGAGACAAAGTGAAAACTGGCCAGAGATATTAACATCTGGATTATTGTGTATGGTGGATTGGGAGTTGGGAGGGGGCTCACATGAGGAGCCTCTGCACTTGTGGTTTGTCAGTTTTTTCAGCGATTTGCCGTGATGCCTTGGTGAACACCTGTTTTATGGCATTGCTGTTCTTAGTCTTTTTGGTGCTTACGTTGTCCCAGAAGTGGCCAATGAGAGTCCCTTCAGGAAAGTTCCTGGCATCCCTGTGACATGCCTCCATCATTTTCTGAAGACTTCCTTTCTTTTCAGAACATTTACAAGCTCATCTGGTTACTAACCCTGTAATCAGCCATAATTCTCCACTTCCAAAGAACTGGTTCCGTTTAGAGGGGGGCGCTATTCAGGACCAAATCTGAGTGCCAGGAGCGTGTTTTGCTAGGAAATAAAGGCACACATATGAACACAGATTCATACTAAAAGGTACATGGGTGCGTACACATGTACAGAAATGCCTCCAAATCCAATCTATGATTCCCTCACATTTTTAAGTCCGTTTTCAATAGAATGGGGCTTCCCTGGTGGCTCAGAGGGTAAAGCGTCTGCCTACAATGCGGGAGACCTGGGTTCGATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTACTCCTGCCTGGAAAATCCCATGGACTGAGAAGCCTGGTAGGCTACAGTCCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTTCACTTTCAATAGAATGCTGATTACCCCCATAAAAGCACTAATTTGCTGAATTCTAAAATACTTGTAAAATAGTTCCAGAGTTGCTTTTCTCAAACCATTATGAAAACAAACCTGCTAAAAGAAATTTAGGATGTGTTTGCTGTTCCTCTACTATTACCATCCTGTCCAAGACATGGTGAAACAAACCAATGGATGATTTGATTCTACAAAGAGAAAAATATCGCCAAATGTCCCCATTTGTTAATATCAGGGGAAAAGTGAGTTGGCTCAGGCATTAGGAGTCTGTGCTGAGGGTCTTACCTCACATCCAAACGTGAAGGGAAATGAATCACTGAGAACAAATTTGGTTAAAAAACAAAACAAAACGGGAAGATTAATCTGCCCCAGTCTCCGTTTCAGAAGTCTCCACTACGGGGAAACCGGAACCGCCCCTGCAGAAGCCACGGCCCTTTACCCACACTCCCGGGCAGGCTGCTTCCGGCGGGGCTGGGGCACGGGCAGCGTTGTTCTCGGAGAGTTGTCTCAGTTTTGTGTGCCCTCCCAGTAGCACAATTCTCAAGAGAGTTTTTTTTTTTTTTGTCATCCAGAGGCTGGAGCTGGAGAGCTAGTAGATATCACTGAGACTTCTGCAAACTGTCCTGTCTATGCACTCAGGTGCTGGTTGGCTAAGAGAGTCCTGGGTTAAGTTATATTTTGAGGCTCGGGTTTCATGGATTTGTCACAAAAGTGAAAGAAGTCATACTCCAAGGTCATTCACTAACTCCTGCCCCCCTTCCAAGGTCTAATACCTAATTTCATCTTGGCAATTTTAAATTTTTCCTCCCAAAGAGGCACTCCTCAGTCGTGTGAGCCTCGAATCCAATGAATCTGGACTGATCCCTGACTCAAGATACTTGAGACACATTTACAGTGATGATGCTCATATATTTTATATATGCACTGAAGACATACATACCAAATATTGTACACAGAAAAACGAGTCATCTATACACTCAAAAGTCAAAAGTAATAGTTCCTATGTTCTGGGAACATGAGAAAATATTTCTTCTTCCTTTTTTTTTTTTTTTTTAAGTTTTCCATGATTGGGAGAAGTTTTTTCAAAATAGTGGAAAGTAAATTTTATAGAAGCCCAGTAAATAATTTTCAAGATAATTAAAAGCAAAACAAATATAACCAAAATTCCATGACTCCAAAAAACTATTTTAAGTTTTACACTTTCTCTGCTATGATTTGACCACATTCACTGTTTTATAGTTACAACAAAATAAATATTTATAATTTACTTACTAAGCAGTGCTTAGAAATATATTTTTCCGTGTTCCCACACAGTCTTCTTAATTATCATTATGCTTATTATTCCTTTGAATGACCCTACCAAAATTCAAGTCATACTTCCTCTGTAATTGGGTATTTAACTCCATGTAAATGAACATCCTAGTTATTTTGTTTTTAGTATCCCACATAGGTCCAGGAAGGATTTCAGCCTCAATGTATACAGCTTTCTCCTTCCCCTGCCCCACCACCTCCCAGCTAACTGTTTAAAAAAAAATTATTTTTGGCCGTGCCACACAGTTTGTGGACTTTCGTTCCCCACCTGGGGTCAGACCCGTGCCCTGTGCATTGGAATCTCAGAGTGTTAATCACTGGACCACCAGGGAAGTCACTCCTCACTAACTCTTTAGGAAAATCATCATGTCTTTACATTTCAAGAAACACAAGTGTCAAAGTAAGTCTTAAGCAATGGGGCTGTTTGTGTTCCAAGTGTTTGCACTGATTGACACTGATTTACAAAGCTCATCAACTCAGGCAATTATGGGGGCATGTATTAGTCTGCTTGGGCTGCCATAACAAACAGGTCAGCTGGCTTAAACAACAGAAATTTATTGCTGGAAGCTGGAAGTCCAAGTTATGGAGTTACAGAGTTACAGAGGCTGAAAGTCCAAGATCAAGGTGCTGTCAGGGTTGGTTTCTGGTGAGACCGTTTTCTCTAACTTCCTCTGTGCACACTTGGCAAGAGAGAGTAATCTTTGCTTTTTCTTCTACTTCTTGTGAGGCCACCAGTCCTATGGAAGTAGGCCCCACCTGCATGACCTCATTTAACCTGAATTATCTCCCCAAAGGCCCTACCTCTGAATTATGGCTTAGGGCTTCAACACATGAACTGGGGAGGGGGAGCATGGCAGCACATGACTCATCCATAACAGAAGGTAGTTAAGCACATTGGAATTCATTCCCATCTTGCCAGGTTGCCTTTTATGTGATTTTACCTCCCCCGTCCCTTTGAACATAGGCACCCTCTGACACAACAGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCTGCCTGCCAATGCAGGAAACACAGGTTCAATCCCTGAGTTGGGAAGAACCCCTGGAGAAGGAAATGGCAAGCCACTGCAGTAC EMBV3_03530 TCCATACCAAAGACCTCTCAGAGAAGAGTCCTGCTTGAACACCTGAATTAATGGGCCCGG Gene BVT0102_133578 + 1 EMBV3_33231 GK000008.2:103831671-103906599 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228951 TCONS_00228952 1 XLOC_138620 Coding TCONS_00228952 XLOC_138620 NonCoding Coding - 8:103833284-103902092 - TSS170563 686 1 TCONS_00228952_1 136 0.161807580174927 2 0.990059150958478 0.00116429821010263 0.000644506644928343 0.00284920096900305 0.000316324277037581 0.000736930684369002 6.16256998092597e-22 5.18340361396103e-25 0.000120708506487555 0.000241534303174754 0 0 0 1.96929416911235e-05 0.000172559003252544 0 0 0 0 0.00348508814930715 0.00089616691875408 0.000248850644775692 0 0 1.69886670876333e-16 0.00206560451822027 0.00231786029211345 0.00011981074525026 0 0 0 0 noncoding GGGTCTGGGATGAAGCTTGAGATTCTGCCTTCTAACAAGCTCCCAGAGACGCTGCTACACCATCGTGGGAGACAGGAGACACAGGTTCCTGCTTGCCTGAGCTGCGTCGGGGTTAAGCAGACAGGGAGAGAGCTGGAGTGTTCTGACTTTCCACCCCTGGGGATGATCCTGAAGAAGAAACGTTGCTCTCTGTGCTGCTCCTTTGCCCCAGTACCACCCATCGCCCTGGTCCTCTTTGCAGGAGTGTGTACAGGAAGCAAGCAGCCAGAGAAACCCGTCTCCACCTATCCAAGGCAGCGAGCCCATGAAATGGAAGAAGAACTGCAAAGAAAAGAGAAAGGGTCCTGGGGACTTTACTCAGAAGCAAATAATCCTGGTGACTCTTTTTGTGGAATCTGCCCCTGCCAGAGTCCAGTTTAGCATCTGTAGGGACATGCCGGGCTGACAGGACCTCCCCGTCTCTTTCTCGGTCCTGCGGTTTGAGGCCAAAGCCTCCAGGCTGGGACCTATGCTGGCCTGGGTCCTGTCCTGGCTCCGGGCCCATTAATTCAGGTGCTCAAGTAGGACTCTTCTCTGAGAGGTCTTTGGTATGGAAGAAGGGCTAAGCATAGCTTCTCCTGAGGTTTTTGTTTGTTTTTTAATTATGGTAAGAATACTTAACATGAGACCTCCTCTCTTAACAAACC TCONS_00228950 s 5' 1615 TCONS_00228949 s 5' 0 EMBV3_36734 GGATGGAGCTGGCATGTTTTATTTGTTTTCTGGCAATACGACATGTGAGAATTTTGAAGC Gene GeneID:534612|ARID4B:XM_002698795:169_cdna UTR3_Alt 3 NULL GeneID:534612 28 GENE ARID4B NULL AT rich interactive domain 4B (RBP1-like) EMBV3_21202 GCTCACCACAATGCACGGCCGGCATGGCTTCTTCCTGCAACACGTGCTTTTCGCATCTTT Gene GeneID:508534|MGC157263:NM_001101901:147_cdna Constitutive 0 NULL GeneID:508534 18 GENE MGC157263 NULL hypothetical LOC508534 EMBV3_09099 GAAAAGAAGGAGGTGACGTGTACAATTAAAGTCTCCAGATCACACTAAGTTTGTGGGAAG Variant GeneID:510719|TXNL4B:NM_001014897:186_cdna 220^540 3 EMBV3_30516 GeneID:510719 18 GENE TXNL4B NULL thioredoxin-like 4B EMBV3_37070 GTTTGTCCTGCAGTGCGATAGTGACCCAGAGCTGGTGCAGTGGAAGAAGGAGCTTCGAGA Gene GeneID:282682|ADRBK1:NM_174710:470_cdna Constitutive 0 NULL GeneID:282682 29 GENE ADRBK1 GRK2 adrenergic, beta, receptor kinase 1 EMBV3_07167 GACTGATCCTGGGGCCCTTAAGAGGCAAAGAATGACACCTTCCTGGATCAACAGTCCTGA Gene GeneID:513695|PRR19:NM_001075635:208_cdna Constitutive 0 NULL GeneID:513695 18 GENE PRR19 MGC139693 proline rich 19 EMBV3_27613 AAAGGCTTTTTCTACCTGTGGGTCTCACCTGACGGTGGTCACAGTGATCTATGGGACTTT Gene GeneID:614985|LOC614985:XM_002693736:477_cdna Constitutive 0 NULL GeneID:614985 15 GENE LOC614985 NULL similar to cOR8V11 olfactory receptor family 8 subfamily V-like EMBV3_13370 CTTTCCCCTTTGCTTCTTCCCACAAGTAAAATATACAGCAACTGTGGGAAATGGGCCTTT Gene BVV0102_046444 + 0 NULL GK000030.2:125466631-125707433 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11888 AAGTAATTGACCTCCAAACGCCACAGTGACAGGTGCTAAGTCAGCCGCAAGAGATGCACC Gene BVT0102_415060 - 1 EMBV3_31984 GK000011.2:88329065-88418179 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02165 CTTAAACATTTTGACTGCCTTCCAGAAGAAGGAGGGGTAAGTTACCTTCTGGCTGTGAAA Variant GeneID:613357|ERP29:NM_001076271:255_cdna 901^953 3 EMBV3_41424 GeneID:613357 17 GENE ERP29 MGC140608 endoplasmic reticulum protein 29 EMBV3_40028 TGAGCTGAGCGGACCTGGAGGAGGCAGCAGCGCTGCTGGGACATTGCCTTGGGTCCCCTG Variant GeneID:523162|TMEM85:NM_001034547:67_cdna 179^293 2 EMBV3_31810 GeneID:523162 10 GENE TMEM85 MGC127546 transmembrane protein 85 EMBV3_42028 CCCCTGTCCTTCACTATCTCCCAGAGTTTGATCAGATTCACATCGATTGAGTTGGTGATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18358 AAGACCCAGGGGGCCCTCAGGAGCATCAGGACTTGGCATTGTTACCTGATGAGCTTTTAA Gene GeneID:535643|LOC535643:XR_084683:378_cdna Constitutive 0 NULL GeneID:535643 3 PSEUDO LOC535643 NULL similar to MAST205 EMBV3_30039 GGCCGGCCTGCTCCTAGCCTCGCACCTCTACCACTTCTTCTGTGGATGGCCCTCGGGGTC Variant GeneID:505354|LOC505354:XM_002691635:330_cdna 651^761 3 EMBV3_23275 GeneID:505354 11 GENE LOC505354 NULL similar to zinc finger, DHHC domain containing 12 EMBV3_15920 CTAAGTACACAGGTCCTAGAAAAAGAGACATCCATCCAACATTAAAATCAGTGCTTTCAG Gene BVV0102_274877 + 1 EMBV3_36939 GK000004.2:20014388-20153057 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14849 CGGCACCTTTGACGTCGCTGTGGTGGACGCCGATAAGGAAAACTGTACCGCCTACTATGA Gene GeneID:514949|COMTD1:NM_001105368:314_cdna Constitutive 0 NULL GeneID:514949 28 GENE COMTD1 MGC157149 catechol-O-methyltransferase domain containing 1 EMBV3_23118 CTGGCTCGCCTGTGCGGACATCTCCATCAACATCTGGTATGCCTTTTGCATTCCCATCAT Gene GeneID:617787|LOC617787:XM_002693265:13_cdna Constitutive 0 NULL GeneID:617787 15 GENE LOC617787 NULL similar to olfactory receptor, family 52, subfamily H, member 1 (predicted) EMBV3_03205 AGTTCGCCGCGTTCGCAAAGCTCAGAGAAAGTTCCTGCGTCCTTCCCTGTCTTCAGCTCT Gene BVT0102_038059 + 0 NULL GK000030.2:53201044-53396175 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00250952 1 XLOC_153895 NonCoding TCONS_00250952 XLOC_153895 NonCoding NonCoding - X:53394817-53395285 - TSS188173 468 1 0 0.000116288113976948 0 0 0 3.1648537251241e-05 1.52865962226635e-05 0 0.000126382889889012 0.00042148196321119 0 0 0 0 0 0 0 0 0 1.53225046880745e-05 0 0 0 0 0 0 0 0 0 5.18654469840756e-06 0 0 noncoding 0 0 0 0 -0.315619861835555 0.100548817627147 0.015833178620264 0.842426838399165 CCAAGTTAAAGCGCTTTTGTCAGATTCTTTAAAACCGTGTATTGGACCTCCTGCGCTTTCTGGGGAAACGGAGGCGAACAGCCTGAGCGCCCGGAAATGTTTTGCAAGGAAGGAGCGAATGAATGAAACCCGGCCAGAGAGCTGAAGACAGGGAAGGACGCAGGAACTTTCTCTGAGCTTTGCGAACGCGGCGAACTGCAAACTTAACACCCGGGTTAACCAAAGCTTCAGAGACTCAGACTCTTTTAACTCCCAGCACCTGTGAACAGGTGCGGTTCCGACTGAGCAGCCCGGGCCTGGTACCAACTAGCCCAGGACTAGAAGAGATGTAATCCACCTCGAGGGGACTTCGCAGCGGTCCAGTCCACGCTGCGCTGCCTTCGGCTACTGGCCTCGAAGGCCAAGCTGCGGTAGCCCTGCGGCGCACTTGATGTTCTCTACCGGCCCCGCCCGCACCGGGGACTCGCC TCONS_00244370 TCONS_00244371 . 5' 752 TCONS_00244370 TCONS_00244371 . 5' 752 EMBV3_16727 GTGGTGTATATCCTGATGGCTTCTGTTTCATGGCTCTCTGGCGGAATCAACTCAATTGTA Gene GeneID:789792|LOC789792:XM_002689894:54_cdna Constitutive 0 NULL GeneID:789792 8 GENE LOC789792 NULL similar to olfactory receptor, family 13, subfamily C, member 3 EMBV3_35170 CCTGTAGAGCTCGTGGAGAGCGCTGGAGACGAAATAGTGGACCTCACCTGTGAATCTTTA Gene GeneID:617018|RNF4:NM_001046589:34_cdna UTR3_Alt 3 NULL GeneID:617018 6 GENE RNF4 MGC137906 ring finger protein 4 EMBV3_11383 TCTCCACCACTGCCCCTTCCTCTGATTATCCTCCCTAGTCCTACCAAAACAAATAATTGA Gene GeneID:615152|LOC615152:XM_002692696:82_cdna UTR3_Alt 2 NULL GeneID:615152 14 GENE LOC615152 NULL similar to chromosome 8 open reading frame 34 EMBV3_14641 TTTGTGCGAGAGCGCGAAAAGAGGCGGGCACTGCTGTACAAGAAACACAACCTGGCCCAA Gene BVT0102_110848 + 0 NULL GK000007.2:2569717-2600731 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215024 1 XLOC_130817 Coding TCONS_00215024 XLOC_130817 Coding Coding - 7:2586101-2586584 - TSS160686 385 1 TCONS_00215024_1 34 2 0.205394190871369 0 0 0 0 0 0 0 0 0 0 0 0 7.45266953486702e-06 0.00025658111030885 0 0.000754614869252527 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000171778296597062 NM_001098623.2 OBSCN Homo sapiens obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (OBSCN), transcript variant 2, mRNA. 2e-80 302 82.33 0.776623376623377 0 coding 0 0 0 0 GTGAGGGAACGCGAGACACGCAGAAGGGCCTGCGCAAGGGGCTCATCCAGCTGAGCCGCTGCTATGCCGGGCTGTCTGGGGGCGCTGTGGCCTTCCTCCGAAGCACACTGTGTGTGCACCCCTGGGTCCGGCCGTGTGCATCCAGCTGCCTGCAGAGCCCGTGGCTGACGGAGGAGGGCCCAGCCAGCTCCCAGCCCGCGGCGGTGACCTTCCCGACCACTGGTCTGCGCGTCTTTGTGCGAGAGCGCGAAAAGAGGCGGGCACTGCTGTACAAGAAACACAACCTGGCCCAAGTGCGCTGAACCCCTGGCCCTTCAGGGCCCCGCCTCCCGGTCTTTCAGGACTCCCTGCGTATGCACGCACACGTCAATAAAAAGCAGCACTC TCONS_00215025 s 3' 14370 TCONS_00215025 s 3' 14148 EMBV3_14037 GGCAGGGGCTTCAGCCTGGAGGAGCTAAGGGCTGAAGAGCTTAAACTGGCCACTCAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22659 GGATCCTGAAGAAAGCATCAGAAAGCATCAGAGAGACACAGGTTCCATCCCTGACCCGAG Gene GeneID:100336101|LOC100336101:XM_002695470:171_cdna Constitutive 0 NULL GeneID:100336101 18 GENE LOC100336101 NULL hypothetical protein LOC100336101 EMBV3_30974 ATTCAGTACTCTTCCTCCCCCAACAGAGTCTTTATCTGTGGTTCCAGCACGTGGAGAGTC Gene BVV0101_026159 - 0 NULL GK000006.2:21218830-21981190 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20096 GCACTGGCAGGCAGATTCTTTACTACTGGGAAGCCTGGAGTTAGGGAGAGACTGATACAT Gene BVV0101_007330 + 0 NULL GK000004.2:7681090-7844201 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17943 GACTGCCAGGTCAGCATCACGCAAGCACCTGTAGCAGGGAAGAAAGTCAAGATATATCAC Gene GeneID:539399|SLC39A9:NM_001101191:187_cdna Constitutive 2 NULL GeneID:539399 10 GENE SLC39A9 NULL solute carrier family 39 (zinc transporter), member 9 EMBV3_37565 TCTTTGACTGCTTTGATGACATAGGGATCTGTCAAGTTCACATGGTAGTGAAAGAAAATG Variant GeneID:509228|PLAC8:NM_001025325:10_cdna 256^495 2 EMBV3_34904 GeneID:509228 6 GENE PLAC8 MGC140273 placenta-specific 8 EMBV3_39111 GTGTCATAATCTATAATCTTTAAATTTTATGGTCACAACAAACTACTCCTCCTCAGTATG Gene GeneID:519982|RAB33B:NM_001083440:26_cdna Constitutive 1 NULL GeneID:519982 17 GENE RAB33B MGC137827 RAB33B, member RAS oncogene family EMBV3_09638 CCACAAGAGACTCAACAGAATTAGACCACAAAATTTGCATTGTTCATTGTAGCACTATTG Gene GeneID:533945|CNOT2:NM_001103277:7_cdna Constitutive 3 NULL GeneID:533945 5 GENE CNOT2 MGC140232 CCR4-NOT transcription complex, subunit 2 EMBV3_41647 TGACTTAAATAGTTTTATATACCGATTTTAGATTGTATGATAAGGGACTCTTCCCTGATT Gene GeneID:539542|HHEX:NM_001105424:207_cdna Constitutive 2 NULL GeneID:539542 26 GENE HHEX NULL hematopoietically expressed homeobox EMBV3_17876 GATGAGAGATTACATTTGGCCTGTACTCATATACCAATTCCTGTAGTAAGATCAAGTGGC Gene BVT0102_026032 + 1 EMBV3_05098 GK000019.2:12231485-12536190 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095182 1 XLOC_057658 Coding TCONS_00095182 XLOC_057658 Coding Coding BCAS3 19:12382827-12588695 j TSS71038 1696 1 TCONS_00095182_3 338 13 0.991824818936498 0.000194425573506894 0.000244267350700003 0.000208182076051617 0.000546773356809875 0.00028182325138484 7.20851620717058e-298 0.000389557909789519 0.0012844392025876 0.000347941816351734 0.000594914717896298 0.000414499070996167 2.15498596575035e-05 1.65588695188506e-05 0.000596445030952341 0 0.000292051784428874 0.001221738183904 0.00805351456918477 0.000954832249616656 4.31294311286053e-05 0.00044514809690316 0.00291833263649474 0.000438215814041442 0.00105398873717327 0.000167232585758678 0.000384018805506215 0.000527032908537783 0.000173542447731707 0.000369593057452338 0.000256330945586714 XM_599680.7 BCAS3 PREDICTED: Bos taurus breast carcinoma amplified sequence 3 (BCAS3), mRNA. 0.0 1802 100.00 0.588443396226415 XM_005257472.1 BCAS3 PREDICTED: Homo sapiens breast carcinoma amplified sequence 3 (BCAS3), transcript variant X1, mRNA. 0.0 1514 93.59 0.588443396226415 TCONS_00095182_3 sp|Q9H6U6|BCAS3_HUMAN BCAS3_HUMAN Breast carcinoma-amplified sequence 3; 0.0 678 99.08 0.964497041420118 0 coding GTAAACACACCCGTCTCGGTGTCGAGTCTGACTGCTAGCCTGCGACGCCCGAGTAAGAGGTTTTCTGAATGAAGAAATGGCTACAGACTCCCCCAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCTCAGGCCGTCACGGAGCAGTCCTACATGGAAAGTGTCGTGACTTTTCTGCAAGATGTTGTGCCTCAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCAAGGAATCTGGAATTTCATGAAATTCATAGCACAGGGAATGAGCCGCCTTTGCTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTATCAGTGGGGAAGCACAGGAGCTTTTTTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATCTTGCCTGCTCCACAGTTTGGTGCTCAAAAGTGTGACAACTTTGCTGAAAAAAGGCCCCTCCTTGGTGTTTGTAAGAGCACTGGATCTTCTGGCACAAGTCCACCTTACTGTTGTGTGGATTTATATTCACTTCGTACTGGGGAGATGGTCAAGTCCATTCAGTTTAAAACGCCTATCTATGATCTCCATTGCAACAAAAGGATCCTTGTTGTAGTATTGCAGGAGAAAATTGCTGCCTTTGATAGCTGTACTTTCACGAAAAAATTTTTTGTCACAAGCTGCTACCCTTGTCCTGGACCCAACATGAATCCTGTTGCTCTTGGGAGTCGCTGGCTTGCTTATGCAGAAAACAAGTTGATTCGATGTCATCAGTCCCGTGGTGGAGCCTGTGGAGACAACATTCAGTCTTACACCGCCACAGTCATTAGTGCTGCTAAAACACTGAAAACTGGCTTGACAATGGTTGGGAAAGTGGTGACCCAGCTGACGGGCACGCTCCCTTCAGGTGTGACGGAAGATGATGTTGCCATCCATAGTAATTCACGGCGGAGTCCTCTGGTCCCAGGAATCATCACAGTAATTGACACTGAAACAGTTGGAGAGGGCCAGAAATCTGCTTCCAGTATATATGGTTCTGCATCTTGATGAGAGATTACATTTGGCCTGTACTCATATACTAATTCCTGTAGTAAGATCAAGTGGCGTTTCAAAAAAATACAGACTGTGCTGCAGTGAAAAGAAAAAAATCTTTAAAATTCTGGCTATTATTGAATTTGGCTATTATATTTTATTTGAAATATGAATAATATAATTCTCTGCCTTTCCCATCTTAACTTTGTGGTTAACCAGATATGTTACAGGCTTGTATTCCTGTTTAAAAATCTTTTTAATGAAGTGCTAGCAAACTTTTCAGTTGACTGTAATGACTTTTTTTTTTAACGTTGTGTTAATTAGCTCGAGTTGACAGACACATACAGATGTTCTCTTTTTAAATTGGAATTAAATATTTAAACGCTTAGTGTTTTATGAGTGTTAACAAATATTTTCTTTTGTCCTTTGATTCTTAATTAATTCACCTCCAAGGCCACCCACATTTACTAAGTAGTAACAACCCTCCTCAATATTGTCTAGTTTGGCGGGTATACCTAAGTATGTTAAACATCTAGCATTTGTTGACAGACTGATGTGTGGTGATTTAAAAGTTGAAACTGTTATCTCCTATTATTTTTGATGAAATAGAGCTATAAC EMBV3_08471 TGTTTACAAGGTGTCAGAATATGCGCGGCGTTTTGGTGTTCCTGTCATTGCTGACGGAGG Gene GeneID:511969|IMPDH2:NM_001034416:145_cdna Constitutive 0 NULL GeneID:511969 22 GENE IMPDH2 MGC129024 IMP (inosine monophosphate) dehydrogenase 2 EMBV3_37798 ATGAACATCATCCATGAGAAACTTGACTCCTCAGTGCCAAGACCATCCTGTGTACCTGCC Gene GeneID:282574|GDF9:NM_174681:8_cdna Constitutive 0 NULL GeneID:282574 7 GENE GDF9 NULL growth differentiation factor 9 EMBV3_23143 AGTTCACTGTCGAGCGCTTCAGCAGACTGAGTCTTGGTCCTGTCACGCGCAGGCGGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18319 GTGATGAATCCATAATGTCTGGAACTTTGCTGAGACATGAGTGGGGCACACTTTTCATTG Gene GeneID:520994|PTCH1:XM_002689829:20_cdna UTR3_Alt 2 NULL GeneID:520994 8 GENE PTCH1 NULL patched homolog 1 (Drosophila) EMBV3_35952 TGGGCAGACCAGAATTTGACTTTTCATAAGGTCAGAAAGCAACATTGAATGCAGAAGAAA Variant GeneID:617441|C14orf153:NM_001076459:309_cdna 349^412 2 EMBV3_32618 GeneID:617441 21 GENE C14orf153 NULL hypothetical protein LOC617441 EMBV3_14762 TCTTCAGCACAGACCCGTTTTTTAGAATCTTTTGTGCACCTTGTCTGATGCGCCCCACCC Gene GeneID:507100|SPI1:XM_002693544:168_cdna Constitutive 0 NULL GeneID:507100 15 GENE SPI1 NULL spleen focus forming virus (SFFV) proviral integration oncogene spi1 EMBV3_08222 TCCTGCGCGACCACAGCTATGCGACCGAAGATAAAACTGTGAAGCTGTGGAAAGTCAGCG Variant GeneID:509290|PPP2R2B:NM_001014879:34_cdna 523^786 1 EMBV3_15062 GeneID:509290 7 GENE PPP2R2B MGC139491 protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform EMBV3_06451 AAACAGAACACCGGAGTGTGGCTGGTCAAGAAATCAAGGAAGGACCGAGGTTTCATTTAC Variant GeneID:509259|GTF2F2:NM_001038064:70_cdna 126^199 3 EMBV3_34719 GeneID:509259 12 GENE GTF2F2 MGC133695 general transcription factor IIF, polypeptide 2, 30kDa EMBV3_15116 GGACCAGTAGTAGGGAATCAGGACAAGAACTCCACCATAGAAAGAGATAATCTGCTGTGC Gene BVV0102_391069 + 1 EMBV3_21391 GK000002.2:126129767-126134945 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19807 TTCTTGCGAGCTCCGCGGGTCCCGGCCCAGATGAGGAAGACTGAGGCCTGTTGGAAGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37616 TTGCTGGCAGCAGGCTGAAGACACTAAACTCCTGACATGTACATGCTGCCCTGGCCTTTT Gene GeneID:353115|SOX10:XM_002687922:133_cdna Constitutive 0 NULL GeneID:353115 5 GENE SOX10 SOX9 SRY (sex determining region Y)-box 10 EMBV3_12930 GACACATGCTTCCTTGGCATCGTCCCGTTTCACTGTGCCTGCGACGTGATTTAGAACTGA Gene BVT0102_091340 + 0 NULL GK000024.2:58815927-58886064 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140708 TCONS_00140712 TCONS_00140711 TCONS_00140710 1 XLOC_085195 NonCoding TCONS_00140712 XLOC_085195 NonCoding NonCoding - 24:58838413-58840064 - TSS104957 1125 2 TCONS_00140712_3 77 0.120888888888889 3 0.32 0.00251913826453977 0.000896094794198704 0.00171035842877351 0.000684982874406694 0.0009077278976363 0.000524030817216386 4.61765941976504e-27 0.00175853486367964 0.000286240719239007 0.00162600925731902 2.03460263769107e-05 2.33294172037181e-12 0.000145341898836955 0.000494252778769945 0.00137792047477102 0 0 0 0.0015932678393867 0.00203905937287857 0.000256280901426723 0 0 0 0.00223701070049781 2.13332375069475e-15 0.00111280018724338 0.000101073558817027 3.31517658375411e-21 0 XM_005225449.1 PAOX PREDICTED: Bos taurus polyamine oxidase (exo-N4-amino) (PAOX), 6e-42 176 89.05 0.120888888888889 0 noncoding CTGGGGGAGTGGAGTTAATGAGACCAAAAAAAAAAAAAGAAAACTTATAAAGTGTAGCTTGACAAAAACTCAAGCCGCCATCTGTGTGGATCTGGAAGGGTGAAAGGCACAGGTTTGATGGGAAAGAAAGGGGGCAACCGAGATACTTTCTGTGAAAATTCTTTCCAAAGCGTCTTCCGGGGTTAGTAGCAGAGGAATAAGCAAGAGAGAGACTTGCAGGGAGACGGGCCTGCATCACACTGACCTGGGTCCCTCCTCTCAAAACACAAGCTTTTCCTGAGCCCTTTGTTTGAGACTCGTCCTTCTGAGTGCGGAGAGGACCCTTCATCTCAGTTCTAAATCACGTCGCAGGCACAGTGAAACGTGACGATGCCAAGGAAGCATGTGTCCTTCCAGAAACCCCTTCTTGAGGGCGCCGCACCTGGCTTGCCAGCTCCCGTTCTCACAGGACCCCATGGAAGGGAAGGATGCCCTGGAGACTCAGAGGGATCAGACATTTAAAGCTGACACAAGAGGACTGAGAATGAGAGGGAAACCTGCAAGCAGAGTCTCAAACGGCAGAAATGATGTGCAAGGAAGGAGATGCAGGTAGCGTTTGGTTTGAAAGCTAAGGAAGTGTCTGGTTTCGGGGTGAGGGGATACTTCAAACAAACGTCAGCTGTGTCATCCATGGGCTGAGAGGGCAGTCTGCCAGCATCTTGGTTCTGGTTGGGTGAGACAGCATCCCTCGTGAGAATCTGAGGGTCACAACACCGAAAGATCCGCCTGTACCACCGTTCTGCGGGTGAAGACGTGATGTGCTCACAGTCTCCCAGGTTGCCGTGAGTGGCACTAAATTCCAGACTTAAGACCTCAGTGCTGCTGAGCTCAGCACTTCTTTTTCTCCATGATAACATGCAGCCCACGGGACCAGAAGCTGGCTGGCCTCCTTCTCTGAAGCTCCTCCTTTGTATTTACACACCTATGCTGACACCTGGACCTATATATCGCTGCCCTGGTGGCTCAGTGGTAAAGAATCCATCTGCCGATGCAGGAGACCCGTGTTCGATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGCTACGCACTCCAGTATGCTTGCCTGGAGAATCCCATGGAC TCONS_00140703 TCONS_00140704 s 5' 22472 TCONS_00140703 TCONS_00140704 s 5' 23110 EMBV3_31382 AGTCTCTCCAAACGAGCTCATCCTGGGCTGCACTTTAATGGGTGTTCCTGGGAGGACCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37493 ACAGGCGGTCTCAAGTTAACCTTGAAGCTTCAGGAAGTGGCAGTTTTGATACTCGTGATG Gene GeneID:616662|CCDC7:XM_002692119:26_cdna Constitutive 0 NULL GeneID:616662 13 GENE CCDC7 NULL coiled-coil domain containing 7 EMBV3_12239 TGTTGAGACTGACATCCTGACCACTTGAGGAGACTGACATCCTGACCACTTGAGGTACTC Gene BVV0102_083510 + 0 NULL GK000002.2:90172956-90278154 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105794 TCONS_00105795 1 XLOC_062643 NonCoding TCONS_00105795 XLOC_062643 NonCoding NonCoding - 2:90244884-90248067 - TSS77973 390 2 TCONS_00105795_1 44 2 0.87806411062225 0 0 0 0 0 0 1.49530974638082e-05 2.60967872830514e-05 3.5551485432507e-05 0.00157982246072812 0.00100715918629401 0.000500927818437097 0.00331343034159278 0.00511397690528842 0.00192727367135641 0.0638421333290512 0.0306753709189421 0.0837434416351318 0 0 0 0.0181937275732927 0.0440820562264254 0.0314036554315332 0 0 0 0.00466040648191954 0.00524362568660603 0.0134180306381868 XR_227982.1 LOC100848180 PREDICTED: Bos taurus uncharacterized LOC100848180 (LOC100848180), 1e-84 316 78.65 0.935897435897436 0 noncoding 0 0 0 0 -0.0658205733623288 0.664489944205605 0.0502381190048198 0.342564753660519 GCACAGCAGTTCTCCTGGATTCCCTTACCCTACTGCTTTATGCCTGGACGCCCTTTCGCAATAAAATCTCTTGCTTTGTCAGCACATGCGTCTCCTCAGACAATTCGTTTCCGAGTGTTAGACAAGAGCCCAATTTCAGGCCCTGGAAGGGGTCCCCCTTCCTGCAACAAATAGCGACTCTGGTGGGATTCTTTTTTGTTGAGACTGACATCCTGACCACTTGAGGAGACTGACATCCTGACCACTTGAGGTACTCAGGGGCCAGCTTGCCCGCCAATGGACCAGACCCAGCAGCTGCAACTGAGACCCTTTTGTCCCTGGTCTCCTCCTGACGCAGACAACTGGCCAGAGTGCCCTGACCGCTTGTCTCAGCAATCTATCTTTGGATAA TCONS_00102897 r 3' 24304 TCONS_00102897 r 3' 24331 EMBV3_03661 GCCACAAGAAGTGTAGGCTTGTCTCTTTGAGCTGTCACTCTGGGTCTATTAATGGGAATC Gene GeneID:526872|ANKRD29:NM_001102104:28_cdna Constitutive 0 NULL GeneID:526872 24 GENE ANKRD29 MGC152539 ankyrin repeat domain 29 EMBV3_35499 TCCGATGTGATAGATATAACCAAGTGTAGAGAAGACACTCCGCCAGGGGACACATGTCAC Gene GeneID:509382|SETDB2:NM_001143861:76_cdna Constitutive 0 NULL GeneID:509382 12 GENE SETDB2 NULL SET domain, bifurcated 2 EMBV3_40762 TGGTTACAGAGAGTAGACGGAGAGCTGGGGGCCGCATATCCCTGTGCTCAGTATTAATTA Gene GeneID:507809|RUSC2:NM_001082427:29_cdna Constitutive 0 NULL GeneID:507809 8 GENE RUSC2 MGC142511 RUN and SH3 domain containing 2 EMBV3_42466 GACCGGCCTGGGTTCACAGCCTCGCTGGTGCTGCTGCCTTTTTTGTCACCTATGAATATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34040 GGGCCCCACACTGGCCATGAAGAGGTATTTCCAAGGCATCCATGTCTACCTGAAAGAGAA Gene GeneID:617135|LOC617135:XM_002689523:155_cdna Constitutive 0 NULL GeneID:617135 8 GENE LOC617135 NULL similar to interferon-tau EMBV3_42219 ACTGCCTCCCTTTAGTTCAGTGGACAGAGTTCCGAAGGCAAAAACCACCTTCTGACTTGG Gene GeneID:522721|ZMYM3:XM_002700022:100_cdna Constitutive 0 NULL GeneID:522721 X GENE ZMYM3 NULL zinc finger, MYM-type 3 EMBV3_34836 GTTCTGCTAGTTCTGCACTGTGAGGCGGCCGTGGGATTTGGCCTCATGCGACCTTATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05244 TTGGACGAGGGGTATCTCCTCACCGCCACCCTTCCATATGAAGACTCACATAACTCAACC Gene BVT0102_081209 + 0 NULL GK000001.2:65144559-65205810 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003560 1 XLOC_000881 Coding TCONS_00003560 XLOC_000881 NonCoding Coding NR1I2 1:65155391-65211056 x TSS1822 209 0.373205741626794 2 0.996281258982466 0.00101478848045917 5.95718131998033e-06 0.000147428943280434 3.97327631102863e-05 9.44914291620873e-05 2.10024464274883e-48 0.000394246860749244 0 0.000157833591444777 0 0 0 1.00342259687402e-05 2.25071644436397e-05 0 0 0 0 0.000209411211559218 0.000109534594466069 0.00010362159302692 0 0 0 0.000487684650357616 9.73712548724576e-05 0.000330428040786829 4.59578254468442e-05 0 0 XR_238496.1 ZNF845 PREDICTED: Bos taurus zinc finger protein 845 (ZNF845), transcript 5e-22 107 89.87 0.373205741626794 0 noncoding 0 0 0 0 -1.18752505009173 0.00740254294826161 -0.0422950247502593 0.563240818579325 CACCCACACTGAGCAGCAAAGACCTACAGAGTCAAGCAGCCAGACAGAAAATCAGCAGGACACAAAAAGGATGTGATGGAGAACATGATGGAGTAATGGGCAGAGGGTTGAGTTATGTGAGTCTTCATATGGAAGGGTGGCGGTGAGGAGATACCCCTCGTCCAAGGTAAGGAGCAGCGGCTGCACTTTGCTGGAGCAGCCGTGAAGAG TCONS_00000835 r 3' 4350 TCONS_00000827 r 5' 0 EMBV3_20630 GAACACCAAGAACTCTAGTGACGCGAACAACCCCAGGAATAATACGAAACCCCTGTCAGC Gene GeneID:788952|LOC788952:XM_002696072:411_cdna Constitutive 0 NULL GeneID:788952 19 GENE LOC788952 NULL similar to hCG2040262 EMBV3_22964 CTGAGGATCTCGGGTGGTCTGTGAGGATGGCGGGGAGGGGGAAGCTAATTGCGGTGATCG Gene GeneID:282405|ATP6V1F:NM_001045869:140_cdna Constitutive 0 NULL GeneID:282405 4 GENE ATP6V1F ATP6S14 MGC137008 ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F EMBV3_20739 ACACAAAACTACTTTGCGTCTACAAAGAGGAGGCAACGAGCACATCAAGAGAAGGTCACC Gene BVT0102_127279 + 0 NULL GK000008.2:57490818-57963951 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227707 TCONS_00227706 1 XLOC_138301 Coding TCONS_00227706 XLOC_138301 Coding Coding TLE1 8:57934238-58012712 o TSS169938 2208 1 TCONS_00227706_2 315 6 0.971939393167077 0.00077333026708497 0.00050511896291748 0.000720872680633562 0.00080170638782598 0.00057689738091374 0.00108299827027563 0.000248268567969026 0.00109287281585705 0.00022502518444195 7.39477335668289e-10 4.11975943552978e-10 8.74306142353816e-05 9.20543323368301e-06 7.83554823370463e-10 8.30165113911891e-10 0.00471293128883135 0.00289110666340259 0.00306204535527322 0.000561836379987963 0.000159677885156256 8.93669577090999e-05 0.00348571373346911 0.00173052228077594 0.00252195620792604 0.000326341551760869 0.000293560761674068 0.000285262222954664 0.000580703750715815 0.000528732823387191 0.000191832826612912 XM_005210075.1 TLE4 PREDICTED: Bos taurus transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (TLE4), transcript variant X1, mRNA. 0.0 1375 91.20 0.442028985507246 NM_005077.3 TLE1 Homo sapiens transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (TLE1), mRNA. 0.0 1929 88.58 0.66213768115942 TCONS_00227706_2 sp|Q62440|TLE1_MOUSE TLE1_MOUSE Transducin-like enhancer protein 1; 0.0 668 99.68 0.996825396825397 1 coding 0 0 0 0 0.0408192419704014 0.865721728266029 0.0119466557210211 0.796671060360293 AAGCGCATACTCCTTCCACGTTACCGCAGATGGTCAGATGCAGCCCGTCCCCTTCCCCCCAGATGCCCTCATCGGCCCTGGCATCCCCCGACACGCTCGCCAGATCAACACCCTGAGCCATGGAGAGGTGGTGTGTGCGGTGACCATCAGCAACCCCACGCGACACGTGTACACGGGTGGGAAGGGCTGCGTCAAGGTCTGGGACATCAGCCACCCCGGCAACAAGAGCCCCGTCTCTCAGCTCGATTGTCTGAACAGGGATAACTACATCCGTTCCTGCAAATTGCTCCCTGATGGCTGCACTCTCATAGTGGGAGGGGAAGCTAGTACCCTGTCCATCTGGGACCTGGCGGCTCCCACCCCGCGCATCAAGGCAGAGCTGACGTCCTCGGCCCCCGCCTGCTACGCCCTGGCCATCAGCCCGGACTCCAAGGTCTGCTTCTCGTGCTGCAGCGATGGCAACATTGCTGTGTGGGACCTGCACAACCAGACGCTGGTGAGGCAATTCCAGGGCCACACGGACGGGGCCAGCTGTATTGACATTTCTAACGATGGCACCAAGCTCTGGACGGGCGGCTTGGACAACACGGTCCGGTCCTGGGACCTGCGCGAGGGGCGGCAGCTGCAGCAGCACGACTTCACCTCCCAGATATTCTCCCTTGGGTATTGCCCAACTGGGGAGTGGCTGGCTGTGGGCATGGAGAGCAGCAACGTGGAAGTCCTCCACGTGAACAAACCTGACAAGTACCAGCTGCATCTCCACGAGAGCTGTGTGCTGTCCCTAAAATTCGCTTATTGTGGTAAATGGTTTGTGAGTACTGGAAAAGATAACCTCCTCAATGCTTGGAGGACCCCCTATGGAGCTAGTATATTCCAGTCCAAAGAGTCCTCATCTGTGCTCAGCTGTGACATCTCTGTGGATGACAAATACATTGTCACTGGCTCAGGGGACAAGAAGGCTACAGTCTATGAAGTCATCTACTGAAAACATTATGTGGTTTAATGTTTATAGTTGAATTGGGCCAAAATGTTTTGAATTTGTAGAAATAGAAAAGTCGTAACTTTAAAAACACAAAAACCTGTTTCCAAACCTTGACACAAAACTACTTTGCGTCTACAAAGAGGAGGCAACGAGCACATCAAGAGAAGGTCACCTATCTACCTAGACCAAATGGAGCACCGAGGCAACGTGGACAGAGGGGTGAGGGTTGGAGGCTCCAGGAACAGAGCCTGCCGGCCCAGGCAGAGTTCATCCTTTTCTTTCTGTGAGGTCTGCCGAGATTACCTTTCTGTTCCTTGTGGTTTCCCTCCTATCTGTCCTTGGTACATCAGTGGTGTCTCCAATGAACTTGTTTCCTGGTTTTGCATCTTGTGAAATGTTTTTTTTGTATTTTTGTTGAAGGTTAAACATTTGTATAAATTGTAAATATATTTGGTTTATTACAGTAAAGGCTTTAGTACCAATAAGTGGTTTTTCCTTCTCCTCCATTATTGTTTTTAATCATTGGTGTGGGTTCTATAAGCAAAGTTCAGAAATTTGTACAGGAAGTTTTAAAATGCGCTTCTCGTTTTATAAATATATTTGGTCACAGACTCCTGCTGCACTAGGACCTAATTACCTCTTCTGAGTTAATCAGGAAGTCAAGAGGAAGAATAATAAGTAACCAAAGGTTTATTAATGATGATTTTATTTGGGAAGCTAACATAACATGACTTAAGCCAAGATTCATTCTTTTGTTTGGATACTCTTGTGATTCGAGGTTGTCAATTAAAACTTTACTTTTTCTTGGTGATTCACTGGGAGACAGAATACTCTTTTTTTCTAGGAAAGCCTGGCACTTTCAAATCTATAGTCTCCCTTTACAGGCTTTACATTTCAAGAAATGAAGGTGACTTGGGTTTAGTGCTAAGACTGATGATATCCACAAAGCTGTGGAGTTCATTAAACTGTAGAAGAAAGGTGAGGTGCCCGCTGGTTTTATCTCATTAATACTTATTTGATCTATTATATTAATTGACTTAAGCCAACCACACCCAGCACTTTGCTCCATCCTTCTCATTAAGGCTTTCCCTACAGCTGCAGCCCTTCCTGCCTGTCATTAGTCTGGTCTTTATCTTCGTGGACAAGCTTCTACTAATTTGATTAGATGGAACCTGTAACCCTGGGCTTTTAATAAGTTGCCATGCATGATTCCTCCTGAAAAGGCC TCONS_00227711 TCONS_00227712 TCONS_00227713 s 3' 8361 TCONS_00227713 TCONS_00227720 TCONS_00227718 TCONS_00227719 s 5' 1162 EMBV3_29188 TTCAGCTGCAACACAGAAGTCTCTTGATAGGAAGAAGTACATGAAGGCTGCAGAAATGGG Gene GeneID:538197|LOC538197:XM_002697980:40_cdna Constitutive 0 NULL GeneID:538197 25 GENE LOC538197 NULL similar to KIAA0420 EMBV3_13294 GAGCAGGAGGGACTGAGCCCTATTGGAGGAAAGCAAGGCAGGGCCCTGACCTCACATCCA Gene GeneID:512356|FKBP8:XM_002688530:118_cdna Constitutive 0 NULL GeneID:512356 7 GENE FKBP8 NULL FK506 binding protein 8, 38kDa EMBV3_25985 GATGACCAGTATGTCAGGCAATCTGGACTTTCTAGTGTCACCATTGAGATGGCGTCCTTC Gene GeneID:512161|HMGN2:NM_001098945:138_cdna Constitutive 0 NULL GeneID:512161 2 GENE HMGN2 HMGN4 high-mobility group nucleosomal binding domain 2 EMBV3_38724 AGCTTAAATGAGTGTGTGTTTGCACACGTAGCTCTGCAGTAACCTACCAGGGAGCATGCC Gene GeneID:517539|MTHFD2:NM_001075755:32_cdna Constitutive 1 NULL GeneID:517539 11 GENE MTHFD2 MGC142685 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase EMBV3_01944 TTTGCTGGTAATGATCCCCCACATACAACCACTATGAGGAATCGATGCTGCATTTTTCCC Gene GeneID:784871|ZBTB33:NM_001098157:25_cdna UTR3_Alt 1 NULL GeneID:784871 X GENE ZBTB33 MGC155143 zinc finger and BTB domain containing 33 EMBV3_27703 TCTTGTTTCCAAAAACCACATGTTTGCCAGGGCCTTAAAAGCCATCATGTAAATTACCAG Gene GeneID:540766|SP3:XM_002685296:106_cdna UTR3_Alt 2 NULL GeneID:540766 2 GENE SP3 NULL Sp3 transcription factor EMBV3_43582 GCGCGCTCCGGTAAAAGCAAACTATGTACAGACACCCAGGAAGCAACCAGAGGAAAGAAC Gene BVT0102_271481 + 0 NULL GK000023.2:43024250-43053331 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16592 CAAGCAGATCACATCCATTCTTCAGCAAAGCTGTCTTGTCAGTGCCTGGGCCTGGGTCTC Variant GeneID:521834|NOSTRIN:NM_001046257:13_cdna 169^252 1 EMBV3_28810 GeneID:521834 2 GENE NOSTRIN MGC128770 nitric oxide synthase trafficker EMBV3_30541 GGCTCAAAGTGGGCCCTGTTCCAGTATTGGTTATGAGTCTTCTGTTCATCGCTTCTGTAT Gene GeneID:506986|SEC61B:NM_001075292:57_cdna Constitutive 0 NULL GeneID:506986 8 GENE SEC61B MGC137059 Sec61 beta subunit EMBV3_32823 CAAAACACCGGGAGACGGGCGTCAAGAACTGCTTCGTTGGCTTCTGGGGAAATCAGATAT Gene GeneID:539681|FANCF:NM_001105425:13_cdna Constitutive 0 NULL GeneID:539681 29 GENE FANCF MGC179453 Fanconi anemia, complementation group F EMBV3_28138 TGCTTCCACGAGGCTGCTGCTTCACCTCACTGACCTCGCACCGTTCTCTCACGGAACCTT Gene BVT0102_016477 + 1 EMBV3_26757 GK000025.2:26204653-26208712 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23179 GAGACACAGCTATTGAAAGTGGACAACATTATTGGGAGGTCAAGGCCCAGAAGGACTGTA Gene GeneID:510535|FSD1L:XM_002689899:33_cdna Constitutive 0 NULL GeneID:510535 8 GENE FSD1L NULL fibronectin type III and SPRY domain containing 1-like EMBV3_33084 CATGCAGAAAGTTATGATGATTTTAAATACTAGGGGTTTAGAGCAGGTAACATTAGCTAT Gene GeneID:528946|PCGF5:NM_001077980:33_cdna Constitutive 2 NULL GeneID:528946 26 GENE PCGF5 MGC142374 polycomb group ring finger 5 EMBV3_15536 CCGCTCCTTGCCTTCCAGACCCATCTGAACCAGAACAAACATCATGGAGGGTGTCACTTA Gene BVT0102_041101 + 0 NULL GK000005.2:26671703-26679263 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191173 TCONS_00191178 TCONS_00191172 TCONS_00191174 TCONS_00191176 TCONS_00191180 TCONS_00191177 TCONS_00191179 1 XLOC_116830 Coding TCONS_00191176 XLOC_116830 Coding Coding ATF7 5:26580733-26674167 j TSS143302 4796 1 TCONS_00191176_3 483 0.042535446205171 12 0.948797534061841 0.000145254743145784 4.69925066015177e-23 0.000106994909035723 0.000232906507448812 7.34670651897276e-05 4.5849348430166e-05 6.70360252501573e-24 0.000461246970704365 0.000177722744139987 1.77171666251764e-05 6.69743376398848e-21 2.56957121160876e-20 7.9957745641588e-17 9.76614731642589e-05 0.000123757003935694 0.000257082041317243 7.08496586734263e-05 4.21621610510635e-23 4.48734423284537e-05 2.25547272215533e-05 0.000180180576135804 5.42527278350854e-14 2.78946629619793e-18 0.000203056505678478 0.00012563835414305 0.000634449974145241 0.000445104784664833 8.37426235374825e-19 5.47900853441396e-13 1.4623109470688e-12 XM_005206196.1 ATF7 PREDICTED: Bos taurus activating transcription factor 7 (ATF7), 0.0 3874 100.00 0.4476647206005 XM_005268587.1 ATF7 PREDICTED: Homo sapiens activating transcription factor 7 (ATF7), 0.0 4352 82.27 0.912427022518766 TCONS_00191176_3 sp|P17544|ATF7_HUMAN ATF7_HUMAN Cyclic AMP-dependent transcription factor ATF-7; 0.0 897 96.15 0.997929606625259 2 coding 0 0 0 0 0.112197966944175 0.710987917490748 -0.0043586889189345 0.931684085034736 GTCTGAGGAAGAGGGTGGGGCATGGACTAACGCCGACCAATAAGAAAGAAGGAAGCTACGATTGGCGGCCACAAATACTAATGAGAGGTCATCTTTACCTTGCGGAGTGACGCCCCTCTTCTCTCCCTCCTCCCGCCTCCTTCCTTTGGGGGGGAAGGCGGGGCCAGAGGCCTGAAGTGTGGGGAGAACTTGGGCTCCGCTCTGCTCTATGAAATATGGGAGACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGGACAGAGATTTACAAACGAGGACCACCTGGCAGTTCATAAACACAAGCATGAGATGACATTGAAATTTGGCCCAGCCCGAACTGACTCAGTCATCATCGCAGATCAAACTCCTACTCCAACTCGATTCCTGAAGAACTGTGAAGAGGTGGGACTCTTCAATGAACTAGCTAACTCCTTTGAACATGAATTCAAAAAAGCTGCAGATGAAGATGAAAAAAAGGCTGCTTCTGGGCCCCTTGACATGTCTCTGCCTTCTACACCAGACATCAAAATCAAAGAAGAAGAGCCAGTGGAGGTAGACTCATCCCCACCTGACAGTCCTGCCTCTAGCCCCTGCTCCCCACCGCTTAAGGAGAAGGATGTTGCCCCAAAGCCTGTTGTGATCTCTACTCCCACGCCTACCATCGTACGCCCGGGCTCCCTGCCTCTCCATTTGGGCTATGATCCACTTCACCCAACCCTTCCTTCCCCAACCTCCGTCATCACACAGGCTCCCCCATCTAACAGGCAACTGGGGTCTCCCACCGGCTCCCTCCCTCTCGTCATGCATCTTGCTAATGGACAGACCATGCCTGTGCTGCCAGGGCCTCCAGTACAGATGCCTTCTGTTATATCGCTGGCCAGACCTGTGTCTATGGTGCCCAACATTCCTGGTATCCCTGGCCCACCAGTTAACAGCAGTGGTTCCATTTCTCCCTCTGGCCACCCTATGCCATCAGAAGCCAAGATGAGACTAAAAGCTACCCTAACCCACCAAGTCTCCTCAATCAATGGTGGTTGTGGAATGGTGGTGGGGACTGCCAGCACCATGGTGACAGCCCGTCCAGAGCAAAGCCAGATCCTCATCCAGCACCCTGACGCCCCATCCCCGGCCCAGCCACAGGTCTCACCAGCCCAACCCACTCCTAGTACTGGAGGTCGACGTCGGCGCACGGTTGATGAAGATCCAGATGAGCGGCGACAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCTCCCGCTGCCGTCAAAAGCGGAAGCTGTGGGTGTCCTCCCTAGAGAAGAAGGCTGAGGAACTCACTTCTCAGAACATTCAGCTGAGTAATGAAGTCACATTACTACGCAATGAGGTGGCTCAGTTGAAACAGCTACTGTTAGCTCATAAAGACTGCCCAGTCACAGCACTACAGAAAAAGACTCAAGGCTATTTAGAAAGCCCCAAGGAAAGCTCAGAGCCAACGGGTTCACCAGCCCCTGTGATTCAACACAGCTCAGCAACAGCCCCGAGCAACGGCCTCAGTGTTCGCTCTGCAGCCGAAGCTGTGGCCACCTCAGTGCTCACTCAAATGGCCAGCCAAAGGACAGAACTGGGCATGCCCATACAGTCGCATGTGATCATGACCCCACAGTCTCAGTCTGCGGGCAGATGATGCCTCCCCTGGTGGAGGGGTCCCCAGCCAGAGCTCGCCCGCCCAAGAGTCAAGAGAGACGTCATCTTATGCTCTCCCGTCTGCCTTGGACACGGCAATATGGGGGAGGGAATTGCGTGTTGTGAGTAATGGTCAGATGTGGGGCTTTTCTCACACAGTCATGTACGTTGACACCTGTACTAGGAGCCTCCCAGCCCCAGAGCCACATAGATCATTCCCCAAGAGGGAAGTTTCTGATGTACCCACAGCCAGAGGCCTTTATGGATGGTCTGAACAATCACCCTGCCCATGCACGTGTACCTGTCTCTTAACACTAACGCTTGCACTTCTGGGATTCAGTTTCTCAGTTGCCTCTCTTCCCACCCAGCCATGGATGATACCTTCTTGATCCTTAGCAGCATGCCACTTCCTGCTCGGTAGAGGGAGGCTAGAGTTGACAGCACATCACTGCTGCCCCGTCCCTAGCCACCCCGTGGACTCAGGACTTCATCTCCCAGGAGCTGCTTATTGGTCCCATTTTCCCCTTCATAAATTCTAGTTAAAACATTGACTTACGGAGAATGTAAGGTTACCTCTAATGTATGAATTAGCAGTATTTCCCAGCTCTTCCATAAACTTTAGCCCTTCTCCCTACCAGCCACCAAAAACAAAAAGAAATGAAATCTTAAAAGTTCTAGTACTTTCTCATTTATTTCAGAGCTATTTGGGTACCTCATTTTTTCTCTTGAGTTTTCCCAGTCTGGTGGTGAAGTCTTTTCCACCTCCCACTAAGCCTTAGCACCTTCATCTTATGGCCTTATTAGATACCGCTCAGTAGTGAAAAGAGAAAACACCCAGGATTTGACTGGCTGATTCCCTCCCCACCCCTGCTCTGTCCTCCAGGACAGACAGGAACAATGTGGTTTGAAAGCTTGTTCCATCAGTTTACTGGATTGATTATGTTTTACAACAGCATATCAGCCAAAGCGTACATACTCCTTTTGGTCATCTTTACACTCCTGTGTCTCTGTCTCTTCATCCCCCTGCCTGTATCCCTGCCTCTGTCTCTCTTCTGTAATTGGTTCTGATGCAGCCCTCTGGAGGCTGTCATGTGGGGGACTTTTGTGCTCCCTCACTCCCCTCACCCCCATCTCTCAGCCTCACATGCCTGTCGTCTTTTATGAGCAAGGGTCTTATATGCACGAATGAGCCTCACTGATCTACCTTCTTTCTCGCGCGCGACTCCAAGCCTGGCCTCTAGGTCTCCTGGTTCTGTAGTGTTTCTTTCGCTCTTTTCTGCTCTCTGCCCCCGGGATGTGATGCTTCTCTGTAGTCTAAGCCCCAGGACTCAGGCATCCTAGCCAAGGTCCGGAGTGGGTTTTCTTGAGTATGAGATAGGTTGGAAGGAGGCGCGGGAAGGGGAGGTGGAATACTGATGTCCACCAAAGAGCCCTGTTTGTTGAAAGGTCCAACCTGCTGGGAAATTAGTGACTATTGCTCTCAGCCATTCTTACTTTGAAAAGTTGGGTTGCAGGGGGGACATTTTTATCCTTCTTGCCCCTCTTTCTTCCCCATTAAGACTTCTCGTCTTCCTTTGGCTCTGAACTATGCAATTTCTACCAAGGCCATAGGAAGCAGTCCAAAGCCAGAGGCCTGTGGATAGATAGGTCAGCTTTAATAGCCCTTCAGTATGAATCCCTTCCAATTGTCCCAGAGCCACTTTCTGCCATCTGCCCATGCCAGTAATGTCCCTTTCTCTCTGTCTCTCTCTCTCTTTCCTACTTCCATCTTATACATGCATACAGAGTAACTGCCAGCTTCCTTTCTTATCTTCCAAAATTGGCTGTCAGAGAGCAATGAGGAAATGGTCTAAACTGCAAGATCCCTGTCTCCTCAGACTGATAAACTGGTGAGCCAGCCAGATGACATGTTTACTGCATTTGTTTTTAATTTCCCCTCCTGTGTTCAGAGCTGGTGCTGAAGAAGCCACACCTGGTGAAGAAAGAGGAGAGAGAAACATGGTTTTCTCATCCTCCCCCACCTAGGACCCAACAGGAACAGCCCCTGTGGTGACTCAGACTAGCAAACGGCACAACAGATGGTCAGGATACAGGTGACCACCTCCAGGGACTCTGCTTGCCTTTAAAACTTCACAGCCATACTTATGCTCAGGACATTTCCTGTAGATGGTTGCTCTCTGGGATTTTCTCCTGCCTTAGCTGTGTTTCATTTTTTTGTTACCTTGATTTCCCGCTAGTAGCCTTGCCCTAAAGCTTGACTGCGTTTATGGCTCCTAAGGAGCCTTCATAAGGCCCTTGGCTAATTTTCTTCCCCCTTTAGTCAAGTGTCTTCAAGTTAAGGATCAGGCTGGCACTGCACATGTGTGCTGCCTCACTGCCTGACCTTGAGGGAAGTTGGAGTCCCTGCTGGTCTTCCCTGGGTAGGAAGTCTAATTTATGGAGCGGGTTTTAATTTCTTAGTCCCCGTGTCTAAGTAAGTCCTTATTTCATTCTCGTCAGTGGGAAGTTAGTCCTGGGGACCTGAGAGGCATGGGCAGAACCTTAGTGGAGCAGCAGTGAGCTGCGGAAGGGACGCGACAGGACCGCCCCCACCCGTACAGCCCTCTTATTGGTTTTCGGTCTCACTGCGAAAGCAGAGCAATTGCTAGAGCTGAAGCCCCTCCTGTAGTCAAGGAGAATGACACTTACCTTGTGACTGCAGCCAGCTGTGTGGCCGCTCACCCCGCTCCTTGCCTTCCAGACCCATCTGAACCAGAACAAACATCATGGAGGGTGTCACTTACTCCTTCTGAAGGACCATGGCCTTTCTATGGGCCTAAGGGAGGACACATTCTGAAAGCGGCTGGGAATGGGCTTCCCTGGTGGCTCAGATGGTAAAGAATCTGCTTGCAATGCAGGAGACCCGATTTCCATCCCTGGGCCAAGAAGATCCCCTGGAGAAGGGAATGACTACCCATTCCAGTATTCTTGCCTGGAAACTTCCATGGACAGAGGAGCCTGGCAGGTTGTAGTCCGTGGGGTTGTAAACAGTTGGACACAACTGAGCCACTAACACTTTGACTTCTAAGGGAAGACAGTTTCTGAAAGGGGAAGAGTGATGCCTTGGGACTTTCCTAAGTGAACACAGGAN EMBV3_09542 TCAAGTCTGCACTACCACACCTTGCATGCTCCGAAACTCTGACAGCATACTGGAAGCCAT Gene GeneID:282290|NDUFV2:NM_174565:23_cdna Constitutive 0 NULL GeneID:282290 24 GENE NDUFV2 NULL NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa EMBV3_33582 TTCAGACATTAAGAATGACAGCGAGAAGAGATTTGTGGGGAGCCAGCAGTTGCCGCATCC Gene GeneID:785863|LOC785863:XM_002689819:19_cdna Constitutive 0 NULL GeneID:785863 8 GENE LOC785863 NULL similar to chromosome 9 open reading frame 153 EMBV3_30435 TTATAATCCTATTGATTGTTCTGTTTCTAGCCCTTTCTAAGGCACAAAATGACGTGATGA Variant GeneID:511018|BCAP29:NM_001038075:45_cdna 269^664 2 EMBV3_13998 GeneID:511018 4 GENE BCAP29 MGC133766 B-cell receptor-associated protein 29 EMBV3_01912 AAGGTCTCAGCAAACTGGGATGGTCGGTCAACTCATGGCCTGGCTTTAGGGTTTGTAGCT Gene BVT0102_391892 + 0 NULL GK000007.2:50687500-50813376 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26937 AAGCGCCGAGTAGTCACCAAAGCATATAAGGTCGGAAGTCCATGCGTCAATCTACAGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08768 CCAAGCCGGCCCCGACCTTGCCGGAGCAAGATGCGCTCCCCTCGTCGGAGGACGATGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05039 TGAGCAGTCCTGTGGCCCTTGGTCCATTGTCAGTCTTTCTGCTTGCTTTCAGTGGTGAGT Gene BVV0102_117157 + 0 NULL GK000023.2:41302732-41467044 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35058 TGTCCCTCCAAGATCCCTGCAGTCACACACAGCCACATGAAAACTTCCAGCCAGTGAAAT Gene BVT0102_431164 + 1 EMBV3_36566 GK000027.2:18072153-18244330 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00157496 1 XLOC_095951 NonCoding TCONS_00157496 XLOC_095951 NonCoding NonCoding - 27:18147440-18147872 - TSS117821 432 1 TCONS_00157496_1 35 0.405092592592593 1 0 0.000519662092456557 0.00087226033977358 0.000471268150394938 0.000595900404263712 0.000737148294098054 0.000434711342553803 0.00164692180410975 0.00173196689406961 0.00279442846819617 0.000147626189096704 1.05980895456014e-05 0 2.32465172620872e-05 0.000620665934107014 0.00138365170793584 0.000122275830565481 0 0 0.00221601469196761 0.00249703064498875 0.0012824522254825 0 0 1.94034979318955e-05 0.000473124954773118 0.000774674451537137 0.000895148314432679 0 0 0 0 noncoding 0 0 0 0 -0.141907704588205 0.295948944137132 0.00959802981830971 0.88461226921995 TCATTTGGATCACACATCGTTTGGATTCTGTTGATGTCTAGCAAGCTTGAGGGGACAACATGGCTATGGCAGTCATGATCAGTGCTCACCAACATCTAGTCCTCTTCTTTCTGGGCACACGGAAGACTGTCCCTCCAAGATCCCTGCAGTCACACACAGCCACATGAAAACTTCCAGCCAGTGAAATGAGAGCAGACATGCTATATTTGTCACTTTCAGCCTGAAGCCATGAAAAACCTCTACACAACGCTAAGATTCTCTTTTCATCCAAGAACATGGAGGTCTTACATGGACTTCACAGACAAAAAGATTAAAGTGGTCTGAATTGCTGAGTCATCATGTGGATGACAGCTGCCTTGGAAAGTTGCCCAGTACCACAGAGGATTCATATAAATTTTTGTGTGCCAAGTAACTGAAAAAAAAAAAAAAAAC TCONS_00155125 . 5' 96350 TCONS_00155125 . 5' 96350 EMBV3_06310 CGCCCGGAACAGGCTTCTGCAGGGCTTGAGCCAAGGCCGCCGCGATGCCGCACTTCCTGG Variant GeneID:535121|LOC535121:XM_002687953:47_cdna 284^361 3 EMBV3_43203 GeneID:535121 5 GENE LOC535121 NULL similar to rCG60321 EMBV3_19390 GCAGCCTGATTGACTTGGGTGTGGCTGTTGGGTTATCAGTACAAGCTAATGATGTGCCTT Gene GeneID:507596|C8H9ORF156:NM_001097994:17_cdna Constitutive 0 NULL GeneID:507596 8 GENE C8H9ORF156 NULL chromosome 9 open reading frame 156 ortholog EMBV3_17635 ATAGTAGCTACCATTTGTTGAACGCCAGTGTCCCAGACACTGTACCAGGCACCTTATTAT Gene BVV0102_214617 + 0 NULL GK000023.2:30312400-30319024 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134833 TCONS_00134832 TCONS_00134834 1 XLOC_081547 Coding TCONS_00134834 XLOC_081547 Coding Coding - 23:30315626-30324560 - TSS100429 5109 1 TCONS_00134834_3 355 0.23429242513212 3 0.428411507892085 0.000276122321061904 0.000476814161390699 0.000145748049484171 0.000143364667511456 0.000177404777254442 8.67842969122295e-05 9.77688757746114e-05 6.57376443740819e-05 0.000100479490963091 0.000262192688254257 0.000704941195088178 9.37728645912197e-05 1.59417794838076e-05 5.11970504400971e-55 1.11474644293238e-05 0.00478168493465844 0.00432729479951258 0.00130231530585811 0.00040370121705656 0.00108369980142796 0.000497349651890945 0.000518119729951243 0.00178648858209955 0.00330946654383976 0.00013227880063918 0.000699637882475667 0.000598201295788472 0.000264452740559189 0.000256166112783926 0.000384559781824039 NM_001192736.1 GLA Bos taurus galactosidase, alpha (GLA), mRNA. 8e-169 600 86.41 0.099236641221374 NM_006298.3 ZKSCAN8 Homo sapiens zinc finger with KRAB and SCAN domains 8 (ZKSCAN8), 2e-113 416 72.64 0.14445096887845 TCONS_00134834_3 sp|Q6ZN57|ZFP2_HUMAN ZFP2_HUMAN Zinc finger protein 2 homolog; 7e-128 379 60.07 0.850704225352113 10 coding 0 0 0 0 -0.083136494757722 0.486623240810853 -0.083136494757722 0.486623240810853 GCCGGGCAGGGTTCGCGGACGCACTTCCGCTGGCGGCAGGTCTGAGGCTCCGAGGTGCAGGATCGGTTTCAACCCACGCCTGGACACAGGAAGTGCTTTCTGAGACATCGGTACCTCTGGATCCAGCTAAGAAAGCAGCATATCTCCAGCCTCACACCATGGAAATCCAGCTTCAGGACCCTCAACACCAACAGGATTGTGGTGATATGATAAGAATAAAGAAAGAAGAACTGGATATAAAGCAGGAACTTACTGTAGATACGGAATCCCAAGAAAAGTTATCAGACCAAATCAATGGAGAGGCTTTTGAATGTGGAGAAACCCAAGAACATAAAGGATGGATGGAAAGATATCAGAGAAACACTTCAAATGAGAGGAAATACAAGTGTGATGAATGTGGGAAAAGATTCACTCTAAAGTCAAGCCTCATTAGACATAAAAGAATCCACCCTGGAGAGAGATCCTATTCGTGTAATGTATGTGGCAAAACTTTCATTCAGAGCTCACAGCTTACTGACCATCAGAGAATACATAGCCAGTTAAAACCACATCAGTGTAATGAGTGTGAGAAAGGCTTTTATTACAGGGCACATCTTGTTCAGCATCAAAGGATCCACTCTGGAGAAAAACCTTTCCAATGTAATGAGTGTGGGAAAGCTTTTCATTACAGCGCAGGCCTTATTCGACACCAGAGGACCCACACAGAAGAGAAACCATACCAGTGTAATGACTGTGGGAAAGCTTTTCATTACAACTCGGGCCTTATTCGACACCAGAGGACCCACACAGGAGAGAAGCCATACCAGTGCAACGACTGTGGGAAAGCTTTCTGTCTGAGCTCACATCTGATACAACATCAGAGAGTTCATACTGGAGAGAAGCCATACCAGTGTAATGAGTGTGGGAAAAGCTTCAGCCAGAGCTCAGGCCTCTTCCATCACCAGAGAAGCCACAGTGGGGAGAAACCATATGAATGTGATGAGTGTGGAAAGGCTTTCAGTCATAGTTCAGCTCTTGTTGGACACCAGAGAATGCACAGTGGAGAGAGGCCCTATGAGTGTGATGTGTGTGGGAAAGCTTTCGGCTATAGCTCGCATCTTCTGGGACACCGAAGAATCCACACTGGAGAGAAGCCATATGAATGCCATGTGTGTGGAAAAGCTTTCCGGCAGAGCTCACACCTCATTGTACATCAGCAAATCCACACTGAAGAGAAGCCCTGGTAATGTCCAGAGTTATGTAGAATTTTCCATCTACGCTCATTCCTATGGGACATCAAAAAAGCACAGCTAGATGTAGGGAACTCTGTGATCACTATTCAATTTCAGCAGTCACTCGGAAATACTTATAGAAGCTGCAATAGACAAGCACCTGACGGTTTACCAAACAAGACACTGATGTTCTGCCACTAAGCACATCATGTGATGAACTAGGACATTGGAAGGGTTCATTTCATTATTCTGAAACTTTTCTTCTCTGAAGCAAGTGGCTCCAGCAATCTAAATGTTCTGTTAGACATATAACGAGATTTTAGAGATTACTACTGTTTCTTTTCTCCTTCCCTTTCCATTCTTCCCCTTTTTTTTGGCTAAAGTATGAATTTAGAATTAATATCTGATCTACACTTTAAAAAAAATGAGTTTTTGGTTAGCTTGATAAAATGTATTAGCCTATGAATTATATACACTAAAAATATTGTGTACTACAAAAGCCATTTTGTGATATTAGAATGAACTATGACTTGCATGGGTAGGATAGGTTAGGGGTGGTGGAGCAAGATTTATCTTGCAATTTCCCAGTGACCTTTCACATCTTAAACCAGAGAGAGCAAACAAGCCAATGAGTTCTATTTAGCCTGTGCATGGATTTTTCTCACAAAGTATGATTATCTCTTGGTAATATAAAATTATTGCCACTACTTAAAGAGATTTTACATAAAATCTGACTTTCCAGATTCTCTTAGAAAAATGCATGATGTGGCAACACAGGCACCAGATTCCCATGTGAGAACAATTGACTAAAGCTGACTATTGTCTAGCGAGACATGGTCCCCACTGCCGCACAGCTTCCTACTGTCTTACATACCTCCCTTCATTCATTTTGCCTGTGTGACCCCTACCACTGCCTTAAGGGTTTCTCAAGGAGGCTTCAGGGCTCTAGGTCCCTTACCAACAAAACAGCTTCACTTTAATTAGTTTTATATATTGGCCTCCCAAATAAGATTTCTCTGAAGATTTTCTGCTAACAGTTTGAAGATTTAGATTAAATAATAAATTTTAAAATGTAACTTTTGAGCACCTGAAGGTAGAGGAAAGCCACTTTAAATTTTTCTTTAGATAGAATTTATAGGTAATCTCAGAGAAGGCAATGGCAACCCACTCCAGTACTCTTGCCTAGAAAATGGACAGAGGAAATGAAAATGCTTCTCCTGCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCACTAAGAATCAAACACGACTGAGCAACTTCACTTTCACTTTTCACTTTCACGCATTGGAGGAGGAAATGGCAACCCACTCCAGCGTTCTTGCCTGGAGAATCCCAGGGACAGCGGGGCCTGGTGGGCTGCCGTCTATGGAGTCGCACAGAGTTGGACACAACTGAAGCAACTTAGCAGCAGCGGCATAGGTAATCTATTGAAAGTCAATAATCATAGCTTCTAAAGAAAAGCTATCACAAACCTAGACAGCATATAAAAAAGCAGAGACATTACTTTGCTGACAAAGGTCCGTCTAGTCAAAGCTATGGTTTTTCCAGTAGTCATGTATGGATGTAAGAGTTGGACCATAAGGAAGGCTGAGTGCCGAAGAATTGATGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGTAAGAGTCCCTTGGACTGCAAGGAGATCAAACCAGTCAATCCTAAAGGAAATCACCCCTGAATATTCATTGGAAGGACTGATACTGAAACTCCACTATTTTGGCCACCTGATGCAAAGAGCTGACTCAGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGATGACAGGATGAGATGGTTGGATGTCTTCACCGACTCAATGGACATGAGTTTGAGCAAGCTCCAGGAGATGGTAAAAGACAGAGAGGCCTTGTGTGCTGCAGCCCATGGGGTCGCAGAGTCAGGCACAACTGAGCGACTGAACAACAAAAACAACAAACCAAATTCTTAGAGACCAGTTAATCAGGTGAGATGAAAAACAAAAACACATATGAAGAGAATCGACATTTAAGTGAAAAACTGAAAAAATGCAGGTCCAAAAGTAGAGATCATTTGGGGAAGAGAACTGTTGAAATGTGAAGCATTCAGTAATAGAAGCAGCTGTGGGAAAGCAGTGGGTTAAGGTCTGAATGGGCAAGTGGGGAGGGGTGAAAAGAAAAAGCAGTTAAAGGAAAAGACAGGGATAAACTGAGAGAAGGAAAGCAGCAAAGAGAAGTTACGGGAAAAGAGGAAAGGTCAGAGACTTTACAAAAATTTCAAACAGGAAATGGAAGCAGTGAAAACATAAGTGAAAAAGCAATCTGTAAAGAAACATGAAGGGGAGATTGAGGATTTGCAGAGGCTGGTGTACTTGCTTTGATCATGGATCTCCCAGTGACTTTAGAGTAATAATCAATCCTTTATTTCCATGCCATGTAGGCCAAATCCCTCATATGAAAGAACTGAACCTGTATTCACTAATGTCTTTATGAATCACTCAGGATCCTGGCCCTGTGTGGGTCTCTGAGATATGAGACACGAGACACTTCTCTTTTCTTTACCACACTCTAAGCCCCAACTTGTTGAACTCTGCTCAGCCTGGACTGTACTTTCTTAGCAAAACCAACAAAGCAGAAGGATTCTCTTGAAGACCAATAATAAATACTTGGCCTCTCTGGGATGCATTGTTGTTCAGTCACTAAGTCGTATCCAAGTCTTTGGGACCCCATGGACTGTAACCTGCCAGGCTGCTCTCGTCTCTGGGGTTTTTCCAGGCAGTAATTCTGGAGTGGATTGCCATTTCTCCAGAGGATCATCCCAGTTCAGGGGTCAAACCTGCATCTCCTGCATTGGCAGGCTGATTCTTTAGCTCTGAGCCACCAGGGGAGCCCCTCTCCCTCACCTGACCAACCACAAATCATTATCTTGACTCTATTTTCAGACAATATCCAGGATCTTGCCACTTAACACTCCTACTGCCTCCAGGCTTGCCTATTCCATTAAGGAGGAAAAAGCATGTTGAGAGTAATACCCATTATGAATTAAATAATATCTGGAAAAGGAAAAGCCCTTCACAAACTGTAACGATAGTAGCTACCATTTGTTGAACGCCAGTGTCCCAGACACTGTACCAGGCACCTTATTATATATCTCATGTAAACTTTCCATCTCTTCTATAAGCACTATTATATCTCAAACAATGTCTACATATAATTTTTTAAATGAAAAGTTTTATTACAGTTAAGCAGCCTACTAAAATGTTTATAGAATAAGATCACACAACTATTTTAAACATTTAAAATAGCAAAAATTGGAAGTAAATGACAACAAAATGTCAACAGTAACTGCATATAGGTGATGAAAATAGATTCCTTTTCTTTCTATTTCTTCTATATTCCAAATGGAAAAGTTAGAATTCATCTATACCTGTAAACTTTTAAAAAATTAAAGTGCTACAGAATATCTGAGCCTTCCTGGAGATGATTCTTTAATAGTTTTGTGTTTGTGTTTGTGTTTGTTTGTTTGTTTCAGTTATTTAGTATTTATAAATTTCTTGAATGAATTTTGGAACTAATGGTTTTTCATTAAGATTTTTAAAAATTTCAGTAGCATACTTATTTCCTCACCTGCTATTATTTGATGAGGAGATACTGATATTATCTGATGAGGAAACATTGATAATTTTTCTCTCAGTTGGATTTACCATGGGTTTGTTGTTTTTATGGGCTTGTTTACAATGATTTCATTCTTAGATTTATTTATTAACATGACTTTTTTCTATTTTCTAATTCATTTACTTCTCCTTTTATCTTGATTTCTTCTCTAACCTTTTCCTTCGGGGTTTCTTCCTC TCONS_00134824 TCONS_00134825 s 5' 3228 TCONS_00134836 s 3' 3944 EMBV3_20088 CTTGTAATGGTGGAGAACAAATCAGTGGTTGATGGATTAGGGTTGTGGGGAGGATGCGGC Gene BVV0102_042302 + 0 NULL GK000026.2:24056838-24131989 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22115 GTACGTCATTGTGTCAAGGGTTACAGTGAAAACAGTTCGGAGCCCTCAAAGCTCAGGCTG Gene GeneID:781953|MATN2:NM_001102528:42_cdna Constitutive 0 NULL GeneID:781953 14 GENE MATN2 MGC139110 matrilin 2 EMBV3_42747 ATGGCATTGTACTGTCCTGGAGTGTTCTGGAGGTGGACAGAAGCTGCGCCACTGTTGACA Gene GeneID:781834|ATF7IP:NM_001102325:59_cdna Constitutive 0 NULL GeneID:781834 5 GENE ATF7IP MGC179386 activating transcription factor 7 interacting protein EMBV3_00205 GGATTGAACCCTCTTCGCCTGTATTGGCAGGCTGGTTTTTTACCACTGAGCCACCAGAGA Gene BVV0102_030317 + 0 NULL GK000012.2:87425535-87606133 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29339 GTTGAACTTGCAGGGCTATGATGGGAGGAAGTGTCCAGGAAATAGCAGTGAGCCAGGAAA Gene BVT0102_031772 + 0 NULL GK000008.2:84133616-84382326 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226061 TCONS_00226058 TCONS_00226065 TCONS_00226066 TCONS_00226062 TCONS_00226060 TCONS_00226059 1 XLOC_137913 Coding TCONS_00226060 XLOC_137913 Coding Coding LOC789977 8:83978618-84135241 j TSS169101 6454 1 TCONS_00226060_8 1397 0.034242330337775 19 0.958913817982148 0.000661932933506511 0.00198075915774509 0.00108592018094818 3.98782875613753e-05 0.00151201612601686 0.000165025599218394 2.33867518295185e-05 0.000285648656925876 0.00280876989801973 1.31605489916319e-09 1.54596331808815e-09 2.9186279465911e-07 0.000228077716411146 5.18089924847723e-10 0.000480953489001956 0.00252730195291904 0.000452385875055242 0.0011353074008967 0.00216229359485318 0.00200405606839094 0.000549755354574177 1.85545427707313e-30 0.000168653218235522 0.00109468543070618 0.00316637374063241 0.000622299541834243 0.000206520583538272 7.70765440519118e-09 5.2096048347952e-18 0.000383579995236757 XM_005210398.1 ERCC6L2 PREDICTED: Bos taurus excision repair cross-complementing rodent repair deficiency, complementation group 6-like 2 (ERCC6L2), 0.0 1.102e+04 100.00 0.946699721103192 NM_001013608.2 Ercc6l2 Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 (Ercc6l2), transcript 0.0 4062 79.74 0.708862720793306 TCONS_00226060_8 sp|Q5T890|RAD26_HUMAN RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like; 0.0 1101 94.92 0.392984967788117 4 coding 1 1 1 1 -0.273451881989699 0.217159406423189 0.00191933750125942 0.968169128508919 GTTCGGGTTGGAAGCTACGCTGGGTTGCAGAGGGAGGCCCAACAGTGAGAGGCAGGAGGGTAAAGGGTCGAATAGGCAGCCTGTTGTCTACCCTCGCCGGCGGAGCTCCAGGCTAGTAGATATATGGCATCCAGGAGAACGATGTCTTGCCCCTTCTCCAGATAATGAAAAACTTTGTGAAGCAAGCATAAAATCTATCACAGTGGATGAAAATGGAAAGTCATTTGCAGTCATCTTATATTCAAATTTTCAAGAAAGGAGAGTACCTCTTAAGAGACTTCAAGAAGTGAAATCTGTTAAAGATTGCTCCAGGAATTTTATATTTGATGATGAAGATTTGGAAAAACCTTATTTCCCAGACCGAAAATTTCCATCGTCAGCTGTTCCTTTTCAATTATCTGAAAATGGAGACTCTATTCCTTATACTATCAATAGGTATTTAAGAGACTACCAAAGGGAGGGAGCCCAGTTTCTCTATGGACACTTCATCCAAGGAAGAGGGTGTATTCTCGGTGATGACATGGGACTTGGAAAAACTGTACAGGTTATTTCATTTTTAGCTGCAGTTTTGGGTAAAAAGGGAACTCGTGAAGATATTGAAAATAACATGCCAGAGTTTTTACTGAGAAATATGAAAAAGGATCCCCCTTCTACAGCAAAAAAGATGTTCTTAATAGTTGCTCCTCTTTCTGTCCTCTACAACTGGAAGGATGAGCTGGACACCTGGGGATATTTCAGAGTCACTATTTTACATGGTAACAAAAAGGATAGTGAACTGATTCGTGTGAAACAGAGGAAATGTGAAATTGCTCTAACAACTTATGAAACACTGCGATTATGTCTGGATGAACTTAACAGTTTGGAATGGTCAGCTGTCATTGTAGATGAAGCGCATAGAATCAAGAATCCAAAGGCCAGAGTAACAGAAATTATGAAAGCTTTAAGATGTAATGTCCGAATTGGCCTCACTGGAACCATTCTTCAGAACAACATGAAAGAACTGTGGTGTGTTATGGACTGGGCTGTGCCAGGACTATTAGGTAGCAGGATCCACTTCAAGAAGCAGTTTTCTGACCCAGTAGAACATGGTCAGAGACACACAGCAACAAAAAGGGAACTAGCTACGGGCCGAAAGGCCATGCAGCGGCTCGCAAGAAAGATGTCTGGGTGGTTTCTCAGACGAACCAAGACTCTAATCAAGGATCAATTGCCTAAGAAGGAAGACCGGATGGTATATTGTTCTCTGACAGATTTTCAAAAAGCTGTCTATCAAACAGTATTAGAAACCGAAGATGTGTCTTTGATACTTCAGTCTTCTGAGCCTTGTACCTGCAACAGTGGCCAGAAAAGAAGAAATTGTTGTTATAAGACCAATTCACAGGGCGAAACAGTGAAAACCTTGTATTTCAGTTACCTTGCAGTCCTTCAGAAGGTAGCTAACCATGTGGCATTACTGCAGACTGCTAGCACCTCTAGACAACAGGAAACACTTATCAAAAGGATATGTGATCAGGTATTTTCCAGATTCCCAGATTTTGTGCAAAAAAGCAAAGATGCAGCCTTTGAAACACTTTCTGACCCAAAATACAGTGGAAAAATGAAGGTTCTTCAGCAGCTTTTAAATCATTGCAGGAAAAACAAAGATAAAGTTCTTCTTTTCTCCTTTTCCACCAAGTTGCTTGATGTGCTGCAGCAGTACTGTATGGCATCTGGACTGGATTACCGACGACTTGATGGAAGTACAAAATCAGAGGAAAGAATCAAGATTGTGAAAGAATTCAACAGTACTCAAGATGTAAACATTTGCCTTGTCTCTACAATGGCTGGTGGACTAGGCCTTAATTTTGTTGGTGCCAATGTGGTTGTATTATTTGATCCTACATGGAATCCAGCCAATGATCTTCAAGCAATTGACAGAGCATATAGGATCGGGCAGTGCAGAGATGTCAAAGTGCTTAGGCTGATATCCTTGGGAACCGTGGAGGAGATCATGTACTTACGACAAGTATACAAGCAGCAACTTCACTGTGTGGTGGTTGGAAGTGAAAATGCCAAGCGATATTTTGAAGCAGTTCAAGGATCAAAAGAGCATCAAGGAGAACTTTTTGGAGTCTATAATCTCTTCAAACTGAGATCCCAAGGGTCTTGTCTTACAAGGGACATCCTGGAGAGAGAAGGCAAGGTGGAAGCTGGGATCATGACAGCTACAACGTGGTTGAAAGAGGAACCTCCAGTACACAAACTAGAAACAGCTAGGGAGCCTGACTGTCGGGAACACAGAGGTCCAGAACAGCTAGCAGAAGCAGCATGTGATCTCTGCAGTGATTTTAGTGAGGATGAAACAGCAAGCAACTCAGTAACAAAGACTGTGAAAAACAAAGCATCTGACTCAAGTAGAGCTTCAGTTTCTCCTGGGCAGTTTAGCTTACTCCAGTGTGGTTTCTCTAAATTGTTTGAGACAAAATGTGAAACAGTTGAGGATGGTGATGAAAATATTGCCTCTGACAATGAAAGTTCGGATGAGCAGCCCACATGCTTTTCAACAGAAGCCAAAAATGCTGGTTGTCAGAAGAGTCAAGACTCTCTTGGTACTTTGAAACATCAGAAATTAGCTAATGTCCTAAATCCAAATGGAAAATGTGTTTTTGAGAAAAGTGAGAAAATTTTAAAAGAGAATATTCCTTCTGAGTCTGATGATGAGAAAAACTTTAAAAACACAGTTGACCACCATCACATTTTACAGAATGTCACAGAATCAGAAGATAGTGATATCATCTTTCCCACACAGTATACAACTCAGAGATTCCTTAAGAAGAATATAAGGTTTAAGCCACCTGTGGATGGATCTGAAGATTCTGAATCAGAAAATCCTGTAAATATAAAAAATAATGGTGATGATACAAAGACCAATGTCAGAGGAAATGGGCTAATTTCAAAACAATTAAATCTTGAGATTGAGACCCTGAAATCTAATACAAAAAGAAAAGGTGGTAGTGATATTAGTGATGAATCTGATGACATTGAAGTTTTCTGCAAGTCAAGAGTAAGAAAGCAAAGAGCTACTAGTTCTCTGAGGTTTAAGAGAAAAAAGGAAAATAAAAGGGAACTTTACACTTTTCCAAAAACAATGAAGAAAGCAAACCAACAGTGTGCAACAGATGAAGATTGTAACTCTCAGACTATTGATGATTTTTCATCCTCAGATGATAATTTATCTGTTGGCCACATCAGTTTCTCTAAACAGAACCATAGACCAAAAACTATAAAAGATAAAATCAGTGTCTCTTCAAAATTAACTAACCATAAAAGAAATAGCACTTTCATACCAAGAAAACCAATGAAATTTTCAAATGAGAGCGTTGTCAATCAAAATCGGATATGTGAATCAATGGATAAATTTTTAGATGGTGTTCAGGAAGTGGCTTACATTCACTCAAACCAGAATGTGATTGGGTCAAGCAAAGCTGAAAATCACATGAGTCGATGGGCAGCACGTGATGTATTTGAACTGAAGCAGTTTTCTCAGCTTCCTGCTAACATAGCTGTTTGCACTTCTAAGACACATAAGGAAAAAATGAAGGGCGATATATCAACACGTACAAAGGAATGCCAACCACTAAGTGAAGGCAGCATTTCATTTCCTCTTTACATTTCACACCCTGTAAGCCAGAAGAAGAAAAAAGTCTGCCGAATAGACCAGACCACCTTCATAATTGGAGAAACACCGAAGGGGATCCGCAGAAAACAATTTGAAGAAATGGCTTCTTATTTTAAGTTGTCTTCTGTAAAGGAATTTGCTAAACGTGTAACTAACGCCACATCAGAAGAACGACAGAAAATGCTAAGAGACTTTTATACTTCTCAGTATCCAGAGGTAAGAGAATTTTTTGTGGATTCTCCCTCAGAATGCACTAAGTCTGCCTCTGAGAAAGGAGAGAGAGTCGAGAATAAGTCTGAAAAAAGACAATCTCTTATGAAAGAGCAGCCATCAGATTCTGAAACTTTGTCATTTAAAAATTCTACCAAAAAAATTTCTCCAATTTTCAGCCCCAGCATATGTAAAAAAAAATCAATTAAGTTTCAAAATCACAGTTCCTGTAAAAAAAAGGTGCTTTCCAATGATGTAGAAACTAAGAAATTACCTATAAGCTGTACCCAAGAGACTGACGGTGGGGAACGCAGCCAAGCATCCGAAGGTACTGCAGCATCCTGTTCCCTGAACAGTAAGTCTGGAGCAGATGAATTGGGAAAATTGGAAAATGCCGGGAAAGGCCAACAGGATCTCACCAGTTTGGGTATTTCAAGAAATGGACCCATCTTCCAAGTGGAAAACAAAACAATAGAAAATCCAGTGTTAGAAGACACTTCTGTGGTAGGCTTACTTGGTGACACCTCTATTCTTGATGACCTCTTTAAAAGTCATGAGAATAGTCCCACACAGCTGCCAAAGAAGGTTCTTTCTGGGTCCATAGAAAAAGCGAAACAGAGACCAAAAGATTTCTGGGACATCTTGAATGACCAAAATGACGACAGTCTTAGTAAACTCACCGACTTGGCAGTAATAGAGACTCTCTGTGAAAAAGTGCCTTTTGCTGCATCTTCCAAAAGGAAGGAGGATCTTGAAGCTTCTCTTTGGAAATCAAATGAGAAATTTTTGTGGAAAAAATTTAACTCAAGTGATACAGATGAAAGCACAGCTAATACACAAGAGTGATACATTAACATATAGACGAATTACTACAACCAATGAATTTCTGCTATCAATGTTTAGAACTCTGTATTCCACACTAATTATGTTACAAAGTTGTCAATATATATTTTTAATAAACCCTCGCTCTGGATTTTTTTTTAAGTCTCAAATGTTAACCATGTGTTAGTTTTCCTTGATAGCTGATTTGATCTTTAAAAAATATATATGATAGTATTATAATATAAACCTCTATTATGAAATGGAAAAGATCCTAGATTTGTTACTAGGAAACCTGGGGCATCTCTCATTATAATTATGTGACCTTAGATAAGTCATTTAGGCTAGTGTGCAGCCATTTCCTCATAATGAAAGATGAAGGGCTTGAAATTAGTAAACATGAGTATCTTCCAGTTTAAAAACACTTTGTTTCATTCTCCTAGATTCCATTAAGTCATAGAACCAAATTATGCTTACCCCCCCAAAATATCAAGTGTACATTAATGAGTTTCTTTCTTACTAGCATTTGGAAGATTATTGTTTTCCTTTTCCCTCAGTATCATGTGCTACCATTATGAAATTATTTATACAAAAGTAATAATGAGTACTAAATACATGATGTATATTAAAATAGTAAGCTCATAACTGCTCAAAAGCAAAGAGTTAATGTTGTATAACTTTACTGTCAATATATGATGTATGATGCTAAAGTAATATAATTATTATCATTAGCCACAGAACACCAGTGCCTCAACTTTTATGCAAGTATATAAAACTTGGTATAGTACTTTTGTATTTCTCTTTGGTATGAATAAATGAGTAAACATTTGATTTTATTTAAAACTTTTACATTTTGTTGAATTTAACATGTTTTATAACCAATGAAATGTGCTTGTTGTTGAATTCACTTGTTTGGAAACATTCACTCAGCCCCTGTGTGTACTGTGCTGTGAGCACTAGATGTACAGGTGAGGCACTGCTACCAGTAAAACAAAGGAAACCATATCTATGAAGAGTCATGTCTGTAAAGCCCCTGGCACATAGGAGCGGATCCGAGCCTTCTACTGACCCACGCACAGATGCTCTGTGGCAACTTTCCATCAGTTGAACTTGCAGGGCTATGATGGGAGGAAGTGTCCAGGAAATAGCAGTGAGCCAGGAAATGGTGGTGCTCAGAGAACACTGAATTGTTCCTGTACTGGGGGGAGAGGCCCTTCGGAGTACCCAGCCATTGTAGTGTCAAGCTACTGCTCAGAAATGACAAAAAGAAAAAAAGAAAAACCTTTTCTCAGGGGACCGAATGGCCATTGAATGGCCTGACTCTCTAGGGCAGTGTTGAGAGCTATGAAATATATTTTACTTCGTGACCCAGTACATATGTGTTATATATATATATGAGTGAAATAAAATGTTTATGAAATATTTACCCTTAAGGCATGCAACATACTTTGATATTTTCTCTTCTGTTGTAATTTTGGTCTTGTATATGTATGTTTTTTTAATGTTTTCATAACCCACTAAATTGATTTCATGATCGCTAATGATTGGTAACCACAGTTTAAAAATTCAGTTTTAGGTTATATAGACTTAGTTGGGTTTTTTTCTTTTTTCTTTTTTGCTACTTGCAGTAGAATTATATCCAGACTTAATAGATGCTACATTTCACCACCAAGAGCTTGCTGCAAAATGAATGTGCTGTGCAGTCTGTGGTAGACTTAATATATAAATATTGGTAGACTGATGTGGGATCAGCTCTACCAGGACCTC EMBV3_21529 CTAGCACAGTCCCCTTCATTACTGCCGACACTTCAGTGCACATACACAGCAGAGCTCAAA Gene BVT0102_343504 - 1 EMBV3_09174 GK000030.2:33801267-33906204 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13197 GTGGAGACCCTGCTTCCTGGATCTACTCAGACCAAATGTGTGATGGGATCAACAACTGTG Gene GeneID:784181|LDLRAD1:XM_002686394:242_cdna Constitutive 0 NULL GeneID:784181 3 GENE LDLRAD1 NULL low density lipoprotein receptor class A domain containing 1 EMBV3_32715 TAAGCTGCCTCATTCTTCCATCCTCAGAACGCAAAAAGTAGAGAATGGAGACCAGCGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18274 TTGGCCTGTACATGGCAGTTACTCATATTCCATCTGTATAGAAGGTATATTTTTTCCATG Gene GeneID:524180|CSPP1:XM_002692684:69_cdna Constitutive 0 NULL GeneID:524180 14 GENE CSPP1 NULL centrosome and spindle pole associated protein 1 EMBV3_09060 TACTGAGTTCTTTGGCGGAGTGAGCGGCTTAACAGTGGAACAGTTTCGGAAGATCAACGG Gene GeneID:282407|B4GALT5:XM_002692354:201_cdna Constitutive 0 NULL GeneID:282407 13 GENE B4GALT5 NULL UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 EMBV3_12672 CATTAGTAAAGAATCCACTTGCCAATGTAGGGGACATGGGTTTGATCCCTGGGCCAAGAA Gene BVT0102_367833 + 0 NULL GK000005.2:104276759-104285968 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193153 TCONS_00193152 1 XLOC_117399 Coding TCONS_00193153 XLOC_117399 Coding Coding MRPL51 5:104273403-104279098 = TSS144421 5195 1 TCONS_00193153_1 128 0.434841193455245 3 0.0881629785739375 4.07577618201454e-43 5.9438671092985e-05 5.6874439341951e-05 1.71704514900673e-05 8.98058253890353e-10 1.37656335757312e-05 7.41769610992832e-05 7.16888968579155e-84 0.000161172352610351 2.11187190444225e-05 2.2848045053442e-05 5.14905743112026e-05 1.40342746535212e-06 1.25776381952124e-37 1.68095403026727e-85 0.0020811247981412 0.000553995186699438 0.000144469208523561 0.000114586478193152 9.59017167337195e-06 0.000168978533428804 0.000133310070140793 8.27587719068777e-05 0.000219198976204533 8.97740451184949e-05 0.000168528568932409 6.46045962357627e-05 7.70177257035097e-05 6.22418607534662e-05 0.000439450125256925 NM_001101088.1 MRPL51 Bos taurus mitochondrial ribosomal protein L51 (MRPL51), mRNA. 0.0 4915 98.55 0.542829643888354 NM_016497.3 MRPL51 Homo sapiens mitochondrial ribosomal protein L51 (MRPL51), mRNA. 1e-141 509 82.23 0.0981713185755534 TCONS_00193153_1 sp|P0C2B6|RM51_BOVIN RM51_BOVIN 39S ribosomal protein L51, mitochondrial; 8e-90 261 100.00 0.9921875 1 coding 1 1 1 1 -3.35560434786309 0.0177254044683825 0.00278241672191348 0.954802659362474 AGAGCTACCTGGGTAAAATCCAAGATGGCTGCATGAAGTTAGTACCCGCGTGACCCCAGCGGAGAAGGTTCTGTTATCTCCTGGAAGGTCACGTCTAACCCTCCCTCTAGTGCTCGTGCAGTCTTGCAGGGGAGAGACGAGAGCAATGGCAGGGAGCCTCTCTTGGGTGGCAGGCAGGCGCTTATGGGGCCTGGTGCCGCTGGCCTGCAGAAGTTTCTTTCTGGGTGTTCCCAGATTGTTCCATGTAAGGGTCACCCTCCCGCCCCCCAAAGTGATTGATCGTTGGAACCAGAAGAGGGCGATGTTCGGGGTATATGACAATATCGGGATCCTGGGAAACTTTGAAAAGCACCCCAAAGAATTGATCAAGGGCCCCGTGTGGCTTCGAGGCTGGAAGGGGAATGAGCTGCAGCGTTGTATTCGAAAGAAGAGAATGGTAGGAAATCGGATGTTCATTGATGACCTGCACAACCTGAACAAACGCATCAGCTTTCTCTACAAACGCTTTAATCGACATGGGAAGCACCGGTAGAAGAAAAAGCTGGCAACTGTGGAAGAGGCATGTCTATCACCAGAGAGAAGGGAGAAGTACTTTTCCTTATGAGGAAGGGGATTTGAATGCTCTCAGTGATAATGCAGGACTCATTTGTAATCCATTATCCACAACTTTAGTTTCCTCTAGATGCTAGTTTTACTCATTCATGCAAGGAGGAAGTGGAACTCATCCCTAAGTCTTACAGTTTTACCTTTGGACTTCACCGCTTGCCCTTGCAGTGTAGCCATACCTGTGGTGTTTAAAAAAATAAAAAAATCATTGTTGGCACTTTTGATGTTTGGCCCTTCATATATTGAAAGTGGTCATTTTAAATTGTCCCATAATGCCATGTTAAATATATTTTTAAAAACCTTTCTGCACTGGAATGAAATATCATAGAAAAATAATTATACTTATACACCATTCTTGTCAAAATACTTATCGAGTACCTTTTCTGAGATGAGAACTCTAGGAAAAACAGTATAAAATATTCTCCCTCCATGCTTTTCTAGTTATGGGTATAAAGTTATAGTCTCATATGTACACTTTAATATATGAGGCCTTAAGTACCATATGAGTGGTTCCTAAGCCTTATTGATCATCAGAATCTCTGCATAGTTTAACAGTTTAAAAAGTCTAGTCCCTGCCCCCAAAGATTGTGATCTTTAGAACTGAGCTGAGTCTTAAGAGTCTTTTTGGGTTTTGTGGGGTTTTTTTTTTAATAATTAAAATGTATCCATCTATATTGGGAGATAGTTCAAAATTGTAAAATTACAGAAGAGTAAGGTGAAAAGTTTTCTCACAGCTGGGTTTTTTTTGTGTGCTCTGTTTCAAGGCAATCATACATGACGTTCTTTTTAGTCCTTCCGGATATTAATATATACTGTGCGTATACAGGCTTGTTTATCAATCTACCTACCTGTCTTCTTTCTGAAAAGCTGGATTCCATGCACATTAAGTTACATTTTCACTTAATGTAACTTAGTTTTTTGTCCTCACGTTATATGCCGTAATGATTTAACCACATCCGTTTTGATGGACATTTAGATTGTTTCTCAGGTGGTGCCGTGATAAAGAATCTGCCTGCCAATGCAGGAGACGCAGAAGATGGGAGTTCGATCCCTGGGTCAGGAAGATCCCTGGAATAGGAAATGGCAACCCACTCCAGTATTCTTGCCTAAAAAGTCCCACAGATAAAGGAGCCTGGCGGGCTCTAGTCCACAGGGTCTCAAAGAGTTGGATGTGACTGAGCCTGTATGCACAATAGTTTCTAGGCCTTTGCTTTGTCAAAGTATGTCTCTGCTGATTTTAGGGCATTCTCATTTTAACAGCCAGTTTATTTTAATGAGCTGTGTTTGGAAACCACTGATGTGGGTGATAAATAATCTAGATAAGAGAATGCTTTTGGCCTAATCAGGAGTGGCCCCATACAAAAGGATGGATTTTAGTAAGCAGAGAAAGAAGTAGAACATTGCCAGTGAGGAAGAGTGGTTGGTGGTACATGATGAGGGAACACAATTTGTTGGGAGATGGCTGGGTAGGTCTAGCTATAATGAACCTTAGTACGGCGCTAGCTGCTTTTTTGTATTTTAGGTAACTTGCTCGGCTATAAATCAACTTAAATGTTTGACATTACTCAATTGAGAGGAGAAAAATATGCTACAGTTCCTAGAATTGTATATTGATTAGGGTTAAATTGAGTGTCATCTGTGCCTAGTGTATGTGAAGTGAAAGAAATTGTAAAAGTGTTAGTCACTCAGTCGTGTTCAACTCTTTCTGACCACATGGACCATAGCCCACCAGGTTCTTCTGTCCATGGGATTCTCCAGGCAAGAAGACGAGTGGGTAACCATTACCTTCTCCAGGGGAGTCTTCCCATCCCAGGGATCAAACCTGGGTCTCCTGCAGTAGAGGCAGATTCTTTACTGTCTGAGCCACCAGGGAAGCCCAGTGTGTGAGGCTCTCAGTAAATATTTGCAAAATAAAATAAGGGAAGTATTTGATGTATTGTTTTTAAAGAAATATTTTATGTGGGTTATAAGTGCTATTTATGTTTCTTGGAAGGATGTTTTAGGTTGATATGAGTAGTATAGTACAGTATAGTTTGGGGAGGGGCAAATAGTATAGAAACTATTGATTAAGAACATGGCCTTTGGGGTTGGACAGATCTGGGCTTAAACTCAAGCTGTAACACTCTGTGGCCCTGGGCAAAGGAATTAACTTCTATGAGACTTAGTTTTTTTTAGTCTGTCTATTAGGAGCAGTGCAATACTTTTCTCATAGGGTTGTGTGAGGAATAAATGAAATTATGCACATAAAATATCTAACACAATTTGGCAAGTGTAAATGCTATGACAGTCCTCTGGAGTGTGTGTAGGGCTTTGGAAAAATGGAAGAAGACAAGGGAAGACTTTTTAAGGTGTCCAAGCCCCTGAAGTCACGTGTTTGCTTTTTGATCTTGCTTGGTTTTATATGTCTCTGTGTCCATCTTTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCGTGGACGGAGGAGCCTGGTAGGCTGCAGTCCGTGGGGTTGCTAAGAGTCAGACAGGACTGAGCGACTTCACTTTGACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGACAGAGGAACCTAGTGGGCTTCCGTCTATGGGGTTGCACAGAATCGGACACGACTGAAGCGACATAGCAGCAGCAGCAGTGTCCATCTTCCCCATTGACTAGGGCTCATCCCCATTCAGGGCAGGGACTGTCTTGCACACATTTGTTCACTGTACTAGTCTCATATCTGGTCTCTTTGTATACTGGCTCTTAGTAGACCCTTGGTAAATATCTAGAAGTCACACATTCAACAGCCATTTATTGAAGGGGACCAGTAGGTTCGAGGGATACAAAGGAAAAAAAAACAACAACTGCATTTAAAGAATTCCTCCTAGTGCAGGAGGTAGACAAAGAAGCATAGTTACAGGGGGAGACAGGGAGGGAAAGGGATGACTGGGAGTTTGGGGATGGTAGATGCAAACTATTACACTTCAGCACATTTAGGATGGATAAACAACAAGGTCCTATTGTATAGCTCACGGAACTATATCTAACCTGGGATAAATCATAATGAAAAAGAATATAAAAAAAAGAATGTGTATAACTGAATCACTTTGATGTACAGCAACTAGACTTCAATAAAACAGAGGGGGAAAAAGCATAATTGTAAAATCTGTTATGGCATTTAAAGCATGTTAATTACCTACTGTATAGGTACAGAGAAGAGGGCCCCTTACCTCATCCTAGGGGAGCAGGAATGAAGGCAGGGAAGGCTTTCTGGAGGAGGCAGTTAACAGATACGGTATGGAGGTTAGCCTGCTTTCCAGGCAGATGAAACTGAAACAAAGGTCAGAGGTGAGAAACAACCTGGCACATACGGGAAAGCTGTGACCGGCATTTGTTGGCAGAGCTAAGGAGAAATTGGGCAGGAGGTGGAGGCCAGAGTCAGATTATGATGAAGACTAAAGAACTATTAAGGGGATTTCCCTGGTGATCCACTAGCTCCCAATGCAGCTCCACAGTCCCAATGCAGGGGTCTGGGGTTCAATCCCTGGTCAGGAAACTAGATCCCATGTGCTGCAACTAAGATCTGGCACAGTCAAATGAATAAGAATACTTTTTAAAAATAAAATATATTTTAAAAAAAAGAACCATTAAGACTTAACCTTTAGTAAAATGGTGCAACCATTTAGGAAAACTGGCACTTCCACAAAAAGTTACATAGAGAGTTACCATATGACCCAGCAATTCTTCCCCTAGGTATACACCCAGGAGAACTGATAACATAGTCACACAAAAACTTGTTGACAAATGTTCACAGCAACATTATTCAGAATAGCCAGAAAGGAAACAACCCAAATCTCCATCAACTGACGAATGGATAAACAAAGTGTGGTCTATGCATATAATGAAATATTACTCAGCTATAAAAATGAATGAGGGGGCTTCCCTCATTAGTAAAGAATCCACTTGCCAATGTAGGGGACATGGGTTTGATCCCTGGGCCAAAAAGATCCCACTTGCTACGGAGCAACTAAGCCTGGGTACCACAACTCCTGTGCTGGTGCTCTAGAGCCCATGTGCTGCAGCTACGGAAGCCTGCATGCCTGGAACTCGTGCTCCACAGTGAGAAGCCCGTGTGCAACTAGAGTGCAGCCCCTGATCACTGCAATTAGAGAAAAGCCTAAGCAGGGGTGAAGACCCAGCACAGCTGAAAATAGATACAATTATTAAAAAAAAAATGAGGTACTGCTATAACATGGAGGAACCTTGAAAGATGAAAGAAGCACGTCATAAAGGCTACATATTATATGGTTCCATTTATGTGAAGTGTTCAGAATAGGCAGATCACAAGAGACAAAAAGTAGATGAGTTGTTGCCAGGGGATGAGGTAAGGAATGAGGGATGGGAGATGACTACCAACAGGTATGCGGGTTCTTTTTGGGTTGATGTAAGTGTTCTGGAATTAGTAGTGATAACTGCACAACTTTATGAATATACTAAAAATCGTATGATTGTATACTAAATGTGTAGGTTCATATGGTACATGAATC EMBV3_02313 TAGCCTGTATGTTAAAGGATAGTTATTGTGTGACTCAGAGAACAGAGATCCTGGGAGGAC Gene BVT0102_179444 + 0 NULL GK000018.2:39624616-39665065 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083174 TCONS_00083171 1 XLOC_051196 Coding TCONS_00083171 XLOC_051196 Coding Coding TAT 18:39571699-39629794 j TSS62573 1925 1 TCONS_00083171_7 447 0.113766233766234 13 0.967087823183117 0.000583636651351304 0.00204591002868151 0.000216722520262706 0.00031670421772269 8.78081680763379e-07 0.000860801208713756 0.000224813617335986 4.45358042191821e-05 2.77814478910993e-05 5.54664529583402e-06 1.70810383912346e-09 2.29563743499936e-11 6.40379627339474e-06 0.00123506759828237 6.20071308284355e-05 0.0019492957369555 7.63799424316823e-21 1.1283374077768e-16 0.00107143657307118 0.000898808888626892 0.000404507416915254 0.000544591564207061 0.000336227233543757 0.00046170225923553 0.000770086508472759 0.000422910059276965 0.000593583645568318 2.76094416628107e-15 9.37187040707012e-05 4.55660606338721e-09 XM_005218655.1 TAT PREDICTED: Bos taurus tyrosine aminotransferase (TAT), transcript 0.0 2531 100.00 0.728311688311688 NM_000353.2 TAT Homo sapiens tyrosine aminotransferase (TAT), mRNA. 0.0 1856 90.46 0.701818181818182 TCONS_00083171_7 sp|Q58CZ9|ATTY_BOVIN ATTY_BOVIN Tyrosine aminotransferase; 0.0 926 99.78 0.997762863534676 4 coding 0 0 0 0 -0.342158274651096 0.0898517614602598 0.0162233411709625 0.731156037466909 GAGCATTCACCTGATGACCCGCGCCGGAAAGGGGAGCAGATGCAGGATCACGGCAGCCTCCCCTCAGTTCTGGATGTGCATGTCAACGTTGCTGGGAGAAGCTCTGTGCTGGGAAAAGTGAAAAGCAGGAAGGCCAGATGGTCCGTGAGGCCCTCGGACATGTCCAACAAAACTTTCAATCCCATCCGGGCCATTGTGGACAACATGAAGGTGAAGCCAAATCCAAACAAGACCATGATTGCTTTGTCGATTGGGGACCCTACTGTATTTGGAAACCTGCCGACAGATCCTGAAGTTACCCAAGCAATGAAAGATGCCCTCGACTCAGGGAAGTTTAATGGCTATGTCCCCTCCATTGGCTACTTATCCAGTCGGGAGGAAGTTGCTTCTTATTACCACTGTCCCGAGGCACCCCTGGAAGCTAAGGATGTCATTCTGACAAGTGGCTGCAGTCAGGCTATTGAACTGTGTTTGGCTGTGTTGGCCAACCCAGGGCAAAACATCCTAGTTCCGAGACCTGGCTTCTCTCTCTACAGGACTCTGGCTGAATCTATGGGAATTGAGGTCAAACTCTACAATTTATTGCCAGAGAAGAATTGGGAAATTGACCTGAAACAATTAGAATCTCTGATTGATGAAAAGACAGTTTGTCTTATTGTCAACAATCCATCAAACCCTTGTGGGTCAGTGTTCAGTAGACGTCATCTCCAGAAAATTTTGGCAGTGGCTGCAAGGCAATGTGTTCCCATTTTAGCTGATGAGATCTATGGAGACATGGTGTTTTCAGATTCCAAATTTGAGCCTCTGGCCACCCTCAGCAGCAAAGTCCCCATCCTGTCCTGTGGAGGGCTGGCCAAGCGCTGGCTGGTTCCTGGCTGGAGGATGGGCTGGATCCTTATCCATGACCGAAGAGATATTTTTGGCAATGAGATCCGAGATGGGCTGACGAAGCTAAGTCAACGGATCCTGGGCCCCTGCACCCTTGTCCAGGGAGCTCTGAAAAGCATCCTGTGTCGCACCCCTCGTGTGTTCTACCACAACACTCTAAGCTTCCTCAAGTCCAATGCGGATCTCTGCTATGGGGCATTGGCTGCCATCCCTGGACTCCGGCCCATTCGCCCTTCTGGGGCCATGTACCTCATGGTTGGAATTGAGATGGAACATTTCCCAGAATTTGAGAATGATGTGGAGTTCACGGAGCAGTTAGTTGCTGAGCAATCTGTCCACTGCCTCCCAGCAACGTGCTTTGAGTATCCAAATTTCTTCCGAGTGGTAATCACAGTCCCTGAAGTGATGATGCTGGAGGCCTGTAGCCGGATCCAGGAGTTCTGTGAACAGCACTACCATTGTGCTGAAGGGAGCCAGGAGGAATGTGACAAATAGGATGGAGTCCGTTCTCCAGATCTAGGAGTCTCATTTGAAAGGACCTTGATGCTGGGAATGATTGAAGGCAGGAGGAGAAGGGGACAACAGAAGATGAGATGGTTAGATGGCATCACTGACTCAATGGATGTGCGTTTGAGTAAGCTCCGGGAGTTGGTGATGGACAGGGAAGCCTGGCGTACTGCAGTCCATGGGGTCGCAAAGAGTTGGACACGACTGAGGGACTGAACTGAACTGAGAAGTCTAACATTGATTGTCCTCCCAGGATCTCTGTTCTCTGAGTCACACAATAACTATCCTTTAACATACAGGCTATAACACAACATTGTAAATCAATTATACTCCAATAAAAATTGAAAAAAATAAAATATAGGCTATATTATTTTATACCCTTTCTGTATACTCTGTTTACTTAGGGCCTTGACATGTGGGAAGTTTCAGTATTTCTGTGGATAATCCAACCAACACCTATTAAGGCCTCCTGCCTATCTCAGACTGGAGGCACTGTAAATCCTACCCCTATTATGGCCACCCACTCCCAC EMBV3_04629 CACCCTACAGCAGTTCAGGCTGTGGTTCGCAGGAAGCATACATTGGCTTTTTGATTCGTG Gene BVV0102_064087 + 0 NULL GK000005.2:57121919-57132350 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192005 1 XLOC_117075 Coding TCONS_00192005 XLOC_117075 Coding Coding BAZ2A 5:57119916-57166556 j TSS143779 15384 1 TCONS_00192005_16 1896 0.0124804992199688 40 0.671004952936384 9.28339639140404e-05 0.000211165398718467 0.000335014971256708 4.70240399182971e-09 0.000163575678973187 4.04410892321436e-06 0.000177004216900536 6.27483043111799e-05 4.14241882254314e-05 0.000229697486037905 2.76915718028947e-06 0.000224728127051726 0.00083221272446468 0.000220554033553251 1.5128481395157e-05 0.000344819172343672 1.15993134589738e-20 4.68885892398076e-32 0.000264788255661398 0.000679451566147236 2.23230558661608e-05 7.27793501097571e-06 4.87890379649501e-05 0.000165833839460521 0.000282255552491433 0.000160484805075769 0.000302769539186706 7.88770390502204e-05 0.000177966723997553 0.000243544437273407 XM_005206543.1 BAZ2A PREDICTED: Bos taurus bromodomain adjacent to zinc finger domain, 2A (BAZ2A), transcript variant X1, mRNA. 0.0 1.543e+04 100.00 0.555967238689548 XM_005268600.1 BAZ2A PREDICTED: Homo sapiens bromodomain adjacent to zinc finger domain, 2A (BAZ2A), transcript variant X5, mRNA. 0.0 9162 89.53 0.445072802912116 TCONS_00192005_16 sp|Q9UIF9|BAZ2A_HUMAN BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A; 0.0 3233 90.98 0.999472573839662 0 coding 0 0 0 0 0.0236965436492268 0.860934450280558 -0.0125687158903251 0.823057141170732 TCTCCACCCGGGCTCCGCCATGTTGGGACTTGTGGGTCGTGTGGTTGCTGCCTCGGCCTCCGGGGCCTTGCGGGGACTCAGCCCTTCAGCGCCGCTACCGCAAGCCCAGCTTTTACTGCGGGCCGCTCCTGCAGCGCTCCAGCCTGCCAGAGACTATGCCGCTCAAGCATCTCCATCGCCAAAGGCCGGCGCCACCACTGGGCGCATCGTGGCGGTCATTGGTGCAGTGGTGGACGTCCAGTTTGATGAGGGACTGCCTCCCATCCTAAATGCCCTGGAGGTGCAAGGCAGGGAGACCAGGCTGGTTTTGGAGGTGGCCCAGCATTTGGGTGAGAGCACAGTAAGGACCATTGCTATGGATGGTACAGAAGGCTTGGTTAGAGGTCAGAAAGTCCTGGATTCTGGTGCACCAATCAGAATTCCTGTTGGCCCTGAGACCTTGGGTAGAATCATGAACGTCATTGGAGAACCTATTGATGAGAGGGGTCCCATCAAAACCAAGCAATTTGCTGCTATTCATGCTGAGGCTCCTGAATTCGTGGAGATGAGTGTTGAACAAGAAATTCTGGTTACTGGTATTAAGGTTGTAGATCTGCTGGCTCCATATGCCAAGGGTGGCAAAATTGGGCTTTTTGGTGGTGCTGGAGTCGGCAAGACAGTACTGATCATGGAGTTAATCAACAATGTTGCCAAAGCCCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAAAGGACCCGTGAGGGCAATGACTTATACCATGAAATGATTGAGTCTGGTGTTATCAACTTAAAAGATGCTACCTCTAAGGTAGCGCTGGTGTACGGTCAAATGAATGAACCACCTGGTGCTCGGGCCCGGGTTGCTCTGACTGGGCTGACTGTAGCTGAGTACTTCAGAGACCAAGAAGGTCAAGATGTGTTGCTGTTTATTGATAACATCTTTCGCTTCACCCAGGCTGGCTCAGAGGTGTCTGCTTTATTGGGCAGAATCCCTTCTGCTGTGGGTTATCAGCCTACCCTGGCCACTGACATGGGTACCATGCAGGAAAGAATCACCACCACCAAAAAGGGATCTATCACCTCTGTACAGGCTATCTATGTGCCTGCTGATGACTTGACGGATCCTGCCCCGGCCACTACCTTTGCCCATTTGGATGCTACCACTGTGTTGTCCCGTGCTATTGCTGAGCTGGGCATCTATCCAGCTGTGGATCCTTTGGACTCCACGTCTCGCATCATGGATCCCAACATTGTTGGCAGTGAGCATTATGATGTTGCCCGTGGGGTGCAAAAGATTCTGCAGGACTACAAATCCCTCCAGGACATCATTGCTATCCTGGGTATGGATGAACTTTCTGAAGAAGATAAGTTAACTGTGTCTCGTGCACGGAAAATCCAGCGTTTCTTGTCTCAGCCATTCCAGGTGGCTGAGGTCTTTACTGGTCATTTGGGGAAGCTGGTACCCCTCAAGGAGACCATCAAAGGATTCCAGCAGATTTTGGCAGGTGAATATGACCATCTCCCAGAACAGGCCTTCTATATGGTGGGACCCATTGAAGAAGCTGTGGCAAAAGCTGATAAGTTGGCTGAAGAGCACTCATGAGGGGGTCCTTTTGGCAAATTAAGCACTCATCCTCCATGGTGTCCCTCTCCTCGCCCCTAATCCGGAAATCGCAGTTTTCTCTGTAGGCCACGTGAGGGCCTTGATTGAAGACATTGTGTTCTGTCTCCCATCTGCCTCTGACGTCCTTGGCACCAGCCTGTCCTGTGTCGCGGTTTGGCCGGAAGGTGGAGCCCATGAGCCGCCTGTGCTCAGTAGTTTGCCTCTAGGAAAGCCTGGATTTGGGGAAATGCTGAGTTATGGGGGTGTGGGCACATCCTCTAGGTTTTGACTCTGGAATGGGTAAGAAGCTGACACAGAAGTCCCCGAGCTACGGGTCCACCCTCTCTGCTCTGTTTTCCCATGTTATCTAGATGCAGAAAGACCTAGGAACTGTGATTCTAAAGGTGGTTTCTCCCATACTTCTACCCCTCCCCCCACACATTTCTGTCTCTTAGCATTCATCGAGAACCTTCTCCTCACTAGCTGCAACTATTTATTTCCTTCCCCCTTCACCACTCCTGGTACCACGCCACTAGGGTGTCAACACAGATCTAACCTTCCTCCATATTTCTCCTGGTTCGGCCCTGTCCTCACCGCCTCCTCCCTCTCCACCCAGAGAAAGCCCCGCCCCTCCCTCCTCCCTCCCCACCCCAGTCTGTCACACAGGGACATCACCCTACAGCAGTTCAGGCTGTGGTTCGCAGGAAGCATACATTGGCTTTTTGATTCGTGCTAGTTCCCAGCTCATAGTTTGGGAGGATCTAACACCAGCCTGCACGTGAAGGGGGAACCAAGGACAGTGAGGAGCTGGTGGTCCCAGCCCTGGAGCCCTGCCAGCCTGACATGAGAATCTTCCTGACCCTCAGGGTCCTGCTGATGTCGCCGGGAAATTGGTGATACAGGCAGGACCGGGCTGCCATCCACGGGGCAGAAATGGAGGCAAACGACCATTTTAACTTTACTGGCCTTCCCCCTGCACCTGCTGCCTCAGGACTGAAACCCTCTCCCTCCTCAGGGGAGGGGCTCTACACTAACGGGTCTCCCATGAACTTCCCCCAGCAAGGGAAAAGTTTGAATGGGGATGTGAATGTTAATGGCTTATCTACTGTATCTCACACTACTACTTCAGGGATTTTGAACTCTGCTCCCCACTCCTCCAGCACCTCACACCTCCATCACCCCAACGTGGCCTACGACTGTCTCTGGAACTACTCACAGTACCCATCTGCCAATCCTGGCAGCAACCTCAAGGACCCACCCCTTCTCTCCCAGTTCTCGGGGGGACAGTACCCACTCAACGGCATCCTTGGGGGCAGCCGGCAACCTTCATCCCCAAGTCACAACACTAACCTTCGGGCTGGGAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTCCCATGGGGCTTAACTTCGATTCACAGGAACTCTATGATTCCTTTCCCGACCAGAATTTTGAGGTGATGCCCAATGGACCCCCTAGTTTTTTCACCTCCCCACAGACTTCTCCTATGTTGGGATCCAGCATCCAGACCTTTGCACCCTCCCAGGAGGTAGGCAGCGGTATCCATCCTGATGAGGCAGCAGAAAAGGAACTTACTTCCGTCGTGACAGAGAATGGTGCTGGCTTAGTAGGCAGCCTGGAGCTGGAAGAAGAGCAGCCAGAACTAAAGATGTGTGGCTACAACGGCTCCGTCCCTTCTGTGGAATCATTACACCAGGAGGTCTCAGTCTTGGTCCCTGATCCCACAGTGAGCTGCTTAGATGATCCTTCACATCTTCCTGATCAACTGGAAGACACTCCAATCCTCAGTGAAGTCTCTCTCGAGCCCTTCAACACTCTGGCACCGGAGCCAGTGAGTGGAGGACTCTACGGTATAGATGACACGGAGCTGATGGGTGCAGAGGACAAGCTGCCTCTGGAGGACAGCCCTGTGATATCTGCCCTTGATTGCCCTTCCCTCAATAATGCCACTGCCTTCAGTCTCCTGGCAGATGACAGTCAAACTTCAGCCTCTATTTTTGCCAGCCCCACCTCTCCACCTGTCCTCGGGGAGTCTGTTCTGCAAGATAATAGCTTTGACCTGAATAATGGTAGTGATGCAGAACAGGAAGAAATGGAGACTCAGGCTTCAGACTTCCCACCTCTGACCCAGCCAGCCCCTGACCAGTCATCCACTATTCAGCTACATCCAGCAACCTCGCCAGCAGTCTCACCAACAGCCTCCTCAGCAGTCTCCCTGCCAGTGTCTCCAGCAGCCTCTCCAGAAATTTCCCCAGCCATCTCCCCAGCAGCCTTCCCAGAGGTCTCTCCAGCTTCCTCAGCAGCCCTCCCACCAGTCTCCTCCGAAGTCTCCTTGACAGCCTCCCCAGTGACCTCCCCAAAAGCCTCCCCTGCAGCTTCCCCGGCAGCTGTCTTTCCGACAGTCTCCCCAGCAGACAAGGATATCAGCAGCGTACCTGAAACAATTGCTGACCTGGAAGACACCACTGTAGAAGGAGTCCCTCCCTCTGGTAGCGGTGATGTCCTGAGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGATGGCGGAGAGAGGTGCGCATCAAGAAGGGCAGTCACCGATGGCAGGGGGAGACCTGGTATTACGGCCCTTGTGGGAAGAGGATGAAACAGTTCCCGGAAGTGATCAAGTACCTGAGCCGCAACGTGGTACACAATGTCCGTCGGGAGCACTTCAGCTTCAGTCCCCGTATGCCTGTTGGTGATTTCTTTGAAGAGAGAGACACACCAGAGGGCTTGCAGTGGGTACAGCTCTCAGCAGAGGAGATCCCATCCAGGATTCAGGCAATTACTGGGAAACGGGGCCGACCTCGAAACACTGAGAAGGCCAAGACCAAGGAAGTCCCCAAGGTGAAACGGGGCCGAGGTCGGCCACCCAAGGTCAAAATCACTGAGCTGTTGAATAAGACAGACACCCGCCTCCTAAAGAAACTGGAGGCCCAAGAAACACTGAATGAGGAGGATAAAGCAAAGATGTGTAAAATCAAGAAGAAGATAAAGCAGAAGGTGCAGCGGGGAGAGTGTCAGACTACTAACCAAGGGCAGGCCAAAAACAAGAGGAAACAAGAGACCAAGAGCTTAAAGCAGAAGGAAGCCAAGAAGAAATCCAAGGCTGAGAAGGAGAAGGTAAAAACAAAGCAGGAAAAACTGAAGGAAAAAGTCAAGAGGGAGAAGAAGGAGAAGGTAAAAATGAAGGAAAAGGAGGAGGTGGCCAAGACCAAGCCAACGGGTAAAGCAGATAAAGTGCTGGCCACACAGAGGCGCTTGGAGGAGCGGCAGAGGCAGCAGATGATCTTGGAGGAGATGAAGAAGCCCACAGAGGACATGTGTCTGACTGACCACCAGCCGCTGCCTGACTTCTCACGCATCCCTGGTCTGATCCTGCCTAGTGGGGCCTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGCACAGCTTCGGCAAGGTGCTGGGCTTTGACCCTGCCAAAGATGTCCCTAGTCTGGGGGTCCTGCAGGAGGGGCTCCTGTGTCAAGGCGACAGCTTGGGCGAGGTGCAGGATCTCCTGGTGCGACTCCTGAGAGCAGCTCTCTGTGACCCTGGCCTGCCCTCCTATTGTCAGTCCTTAAAGATCTTGGGGGAGAAGGTGTCCGAGATCCCACTAACAAGAGACAATGTGTCTGAGATCCTGCGCTGCTTCCTCATGGCATATGGAGTGGAGCCAGCCCTCTGTGACAGCCTGCGCACCCAGCCTTTTCAAGCCCAGCCACCCCAACAGAAGGCTGCTGTTCTGGCCTTCCTTGTGCATGAGCTCAATGGCTCCACCCTCATCATCAATGAGATTGACAAGACTCTAGAGAGTATGTCCAGCTACAGGAAAAACAAGTGGATTGTTGAAGGCAGGCTGCGGAGATTGAAAACTGCTTTGGCCAAGCGAACGGGGCGACCTGAGGTAGAGCTACAGGGGCCAGAGGAAGGCCTGGGGCGGAGGCGCAGTTCTCGGATCATGGAGGAGACCAGTGGCATGGAAGAGGAGGAAGAGGAAGAGACTGCAGCTGCTGTCCATGGCCGTAGGGGTCGAAGGGATGGAGAGGTTGATATCACAGCATCTAGCATCCCAGAGCTAGAGCGCCAGATAGAAAAACTGAGCAAGCGTCAGCTCTTCTTTCGAAAAAAGCTGCTTCACTCATCCCAGATGCTTCGAGCAGTCTCCTTGGGTCAGGACCGCTACAGACGCCGCTACTGGGTGTTGCCCTACTTGACTGGTATCTTTGTGGAAGGAACAGAGGGAAGCTTAGTTCCTGAGGATGTGATAAAACAGGAAACTGACTCCTTAAAAGTGGCAACCCATTCAACAACCAGCCCAACCTCCTTCTCTCTGAAGAGGGAGTTAGCTGGCTCCAGCACCTCTGCCAGTTCTCCTGCCCGGGCCCGAGGCCGACCTCGGAAAACTAAGCCTGGCTCTATGCAGCCTAGGCACTTGAAATCTCATTCCAAGGGTCAAGGTTCAGAAGAGCCTCAGACCCAGCTTCAGCCTGAGACTCAGTCCCATCCTCAGCTTCAGGCTCATGCCCAGCCCCAGCTTCAGTCCCATCCTCACACTCATAATGGGTTCCTGGAGCCAGAAGGCTCCCCATTGTCTCTGGGTCAGAGCCAGCATGACCTCAGCCAGTCAGCCTTCCTGTCTTGGCTGAGCCAGACTCAGAACCATGGCTCCCTGCTGAGCAGCTCAGTCCTCACGCCTGATAGCAGTCCCGGAAAACTGGACCCAGCCCCATCACATGCCCCAGAGGAGCCAGAACCTGACGAGACAGAAGCCAGCCCTGATTCTCAAGCTCCCTGGTTTAATTTCTCAGCCCAGATGCCCTGCAATGCTGCCCCTACACCACCCCCTGCAGTTTCTGAGGACCAGCCCACTCTTTCCCCTCAGCTACCTGCTTCTTCCAAGCCAGTGAGTAGAGCCAGTGCTGCCAACGCCTATTCTCCAGGGCCATTCTCTTCTACTCCTTTGCTGGGCATGGCTCATAAAAGGCAAGCAGGAGATCCTGGAGAAACACCACAGAGCCCCACAGGGCAAGGACAGCCAAAACGAAGAGGGAGACCTCCCAGTAAGTTCTTCAAACAGATGGAGCAGCGCTATCTAACCCAGCTGACAGCCCAGCCTGTCCCACCTGAGATGCGCTCTGGCTGGTGGTGGATCCGAGATCCTGAGACATTGGATGCCACGCTCAAGGCCTTGCACCCCCGAGGCATCCGAGAGAAAGCACTTCACAAACACCTAAACAAGCACAGGGACTTCTTACAGGAAGTCTGCCTACGGCCCTCAACAGACCCCATCTTTGAGCCCAGTCAGCTACCTGCCTTTGAAGAAGGGATCGTGAGCTGGACCCCCAAAGAGAAGACATATGAGACAGACCTGGCTGTCCTTCAGTGGGTGGAGGAGCTGGAACAGCGGGTGATCCTGTCTGATCTGCAGATTCGGGGCTGGACATGTCCCAGCCCAGACTCTACTCGTGAAGACTTGGCCTACTGTGAGCACCTAGCTGATTCCCAGGAGGATATCACCTGGCGGGGTCGAGGCAAGGAAGGTCTGGCACCCCAGCGTAAAACTACCAACCCCCTGGACCTGGCAGTGATGCGACTTGCTGCCCTGGAGCAGAATGTGGAGCGGCGGTACCTGCGGGAGCCCCTGTGGCCAGCTCATGAGGTTGTGCTGGAGAAGGCCCTGCTCAGCACGCCCAGTAGTGCCCCACAGTGTACGCCTACAGAGATATCATACGAGATCACCCCTCGAGTTCGGGCCTGGCGCCAAACGCTAGAGCGATGCCGGAGCGCAGCCCAAGTCTGCTTGTGCCTGGGCCAGCTGGAGAGGTCCATTGCCTGGGAGAAGTCTGTCAACAAAGTGACCTGTCTAGTCTGCCGGAAGGGTGACAACGATGAGTTTCTTCTACTTTGTGATGGGTGTGACCGTGGCTGCCATATTTACTGCCTTCGGCCCAAGATGGAGGCTGTCCCAGAAGGAGACTGGTTCTGTGCTGTCTGTCTGGCCCAGCAGGTAGAAGGAGAATTGACTCAGAAATCTGGTTTCCCAAAACGAGGCCAGAAGCGGAAAAGCGGTTATGTGCTGACCTTCCCAGAGGGTGACAACCGCCGGCGCCGGCTGCTACCAAGGGGCCGAGAGAGCCCAGCAGTGCCCCGGTACTCAGAGGAAGGGCTGTCCCCCTCGAAGCGGCGGCGCGTCTCCATGCGGAACCATCACAGTGATCTCACATTCTGCGAGATTATCTTGATGGAGATGGAGTCCCATGATGCAGCTTGGCCTTTCCTGGAGCCTGTGAACCCACGATTGGTGAGTGGGTACCGGCGGATCATCAAAAACCCTATGGATTTTTCCACCATGCGGGAGCGACTGCTCCGGGGAGGGTACACCAGCTCAGAGGAGTTTGCGGCTGATGCACTGCTGGTCTTTGACAATTGCCAGACTTTCAATGAAGATGATTCTGAAGTGGGCAAGGCTGGACACATCATGCGCCGCTTCTTTGAGAGCCGCTGGGAGGAGTTTTATCAGGGAAAACAGGCCAATCTGTGAGGCATGGGAGGTGGGGAGTCACCCTGTGGCATTGCCCCCTGCCCTCCACACAAACCCTGCCATTCTCACCTGCTGATGCTGCCCTGGGTCCAGACTCAAGTCAGAGGGAGAACCCTGATTTTTGACTCAGCCCTTGGCAGCGCCCTACATCTTCTTATCCTTACACCCTTTCTCCCTTTCCTCCTCTTGTTCCTCAGATAAGAGGGGCAGAGATGAGGTCCTTCTGGACCGAAAGCCAAAAAAGAAAAAATAATTTTTCCTTTCTGTTTTATTTCCTAATTAAATAAGAGGAGGAGGAAAGAAGCCCCTACTTCCTCCTCCCAGCTTCCTCACCTTCCTTGTACGTGCCCCAGCATTCTGGGGCTATTTAACAATAGCAATAGTTCTAGTGAATGTGTGAAACCGAGAAACACTCTGTACTGTGTGTGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAACTCCCAAGTGTGTCGAGCCGGACACCGGGCCCTGAACATGCTGCTTCCATGTTCAGTCCCTCCCCTGCTTCTCACTTTCTCTCTCCCCTCTCCCCTTCAGATTTGTCTCTCATCCAATAATGTAAAACTATGTGTACGGGTTCCTCCCTTCTCTTCCCCCAAATTTTTCCCTTCAAAGGAAAAAGAAGTTCAGAGGTCCCTGTCTTTCTCTCTGTCCTCATCTTCCTGCCAGTAGCTAGCCCCTCTATAATGTTGGATACTCCTCAAATGCTGAGTTTCTAGCCTTTTTTGAAACTCAGTAAACTGGGGAGAGGGCAGGGAGGCACCCTGGACCCTGGGCCTTCCAGCCTCCTTCCCCACCTCTTACCCAAACCTCCCTCTTGGGAACTCCTCAGGGACAACTACTGCTGAGTTCGGGCACACCCCAAGATGGAGGCCAGGTAGCAATCGACTGGCCTGAGACAGAGAGAGAGGTGTGTATGGGTGTGTGAGTGAGTGAGAGAGGATGTGATTGTGCCCCTGTTTTTGGTGGCATCCATTCAGTTTTTTCCCCAAGTATCTGTTCCCCATTGTTTCAAACCATTGAGACACCTTTCTCATTGTTTTAAACTATCACTTTGTCTTTGGGAAACCACAGGAACAGTTTTTCTGGGTCAAAGCTGTGTCTCTTCCCTCTCTCCCAGTCATTTCTGTTCCAGCCTCTTCAAACTGTGCAATCTTTTAGCAGGAACAACTTCTCCTTTCAGTAGCTCTGAGTCCTAAGCTTTTGCAGGGAGAGGGGTAGAACTGGATCTTTTCCTAATCCCATGAGCTTCTGTGGGTTTAGTTGTGCTCTTTCCCTTATCTCCTTTACATCCTGGGACCCCTTCCCCAGTAGCAGAGACCCCAGAGCACAAATGAGTAGGGAGGAGAGGCTCTGGGTCCACCACTGCCCTACATGTGACTATGCCCAAGTTAAGCCCCAACAGAGGAAAGCTGCTAACTCCCAGCTATAGCCATGGGCCCCTGGCCCCCTGCTTTCCTGCTCAGCAGAGCCCCTCCCATCAGAGATTACGGGTACTTGCACTGGGGAGGTGGCTGCTGGCTGGCCCAAGCAGAGAGCTGAGGCACCCAAGAAATGTTCCATTGGTGGGAGAGGGGGTGCCGGGTGAGGGGGAGCATTCCTGTACTTCTAGCAGCACTGAATTGCCACTGAAGGGGGTGGGGGCAGTGTAGGTCCTGGGGCAACCCCTTTCTTTCTTTATGCCCCTTCTACCCCTAGCCTATTTCTAAAGTCGCCTTTTCTGTCATATAAACCTCAGAACTTTTAATTTTATTTGAGATTTTTTTTTTTTTTTTTTGCTTTTAAATAAGAGGTGGATTGAAGAATATTTGAATTGACTTTATATTATGCATAAATATTTATATTTTATCTAAATAACTGCTCTGTAACAAACTTTGTGTTAGTCAAGCATTTGGAACTGTTATAGTTGGGGGCTCTTCTTTTTCCCCACGGCAGTTTTCCCCAGTATAAAATGTTCTAGATTAATTTTACTGTTGGAGGTTAGATGGACGGGGGAGTGAAGTTTCAATTGTTCCTGCTGTGTTCCTCTCCCAGCTCCATCTCTTTCCCTAGGGACCAGGCACTCTGAAGGTGGGGTGGAGTCCTAGCCTCAGTTTGGAATGGGGGTTGATGGGGGGGTGGGACAGGGCATGATCAAAGGGGCCATTTCTCACTTTTCTTTCTCATCTTCACTGCCCCTTGAGCTAGGTGGATTTTCTCTTCTTGACGAGAGTATTTGATAGGGAAGGCAAGTTTTAAAAGTAAATAAAACCCACCCCTACCCCTCTGTTTCCCTTCTCCCATCAGTCTGGTAACAGGAAGAAACCACACCATCAACACCAACAAATTTCCACGTTCCTTTTACAACAAAAGGGACTTGACTTTTTATATAACCAAATGTGGTGTTTTAGTGACTTTTTGATAATGTACAGTTTTTTGTGAATTTAAATTTATTTCTTTCTATATTTTTAGGACCAATCTCATTTTTAATAAGGTAAAAAAAGGAAAAAAAGTCTAGAGATAAAAAAAACTCCTGTTTTTGCCATGTGATGTTCCACAAGTGCAGCTGTAGAAAAGTGCTTGTCAGTTGAATAAAAACCACATTTGATAGAGACTCAAAAGACTCCGTGTATTTATCTTCCTTCAACAAAGGTTCTTGTAATTGCCTAAAGGGGAAAACTGGGTCGTGTCAGGGTGAGTATATGACTGGTTTGATGGAGAAGACAGCAAGCAGGAGAGCAGTGTGCCCCTAAGTGTCAACATTTCTCTCTGAACCTCCAGGCTTGGCCCTTCCTTTTCCAGGGGGCATCCAAGGCAGAATTTCTGTTTATGTGAATGAAACGGGTGCTTCTGGCTGAGGTGCTGTAACAAAGGATTCAAGTGTGCCGAGTTCCTACCTTGTGAGGCATGGCCTTGGCTTTCTAAGGCTGCCACCTGTGTTCCTGATACAGGAAAAGTATGTGCTCATCACCACCTTCCCCAGCTTCCCACCCATGGATAAGACACCACGAGGTAGATTTTGTGTTTTATTCCACAAGTTGAAATAAGAGAAAGTTCTACCAAATTATAGGGAAGAAACATGAGAATACCAAGGGTCAGAAAATTAGAGTGGGCAGCACTGGCACAAACATGGCAAAAGTATAAAATGAGAAACCTCTGGATAAAGAAAAACTGTACAAAATGTGTTTTGAGAATAATTAAACTTATTTCCTGTCCAAGGTGGTAAGTGCATGTAGGAGTGCACTCACCACCCCCGAAATTGTATGTGTTGGGGGATGCAAACACCAGTAAATGCTGTGAGAACTTTTTACAAGCTGGGAAAGCTTATCACACTGAAGGCTGGAAGTTTTGTTTTGGTGACCCTCTAACTTGGAATAGGAGGAGAAGGAATATCTCTGTTTTCAACCCTCCAAAAACCTCAGATGGCCACTTTGGTGCATGCTTACCTTCTCAGCTAGTGGCAGCCACTGGCAAACTTAAACAAGTCATAAGTTCTGCTTCAGTGCTGGTGTTCTGGGGGTGGCTCCCAAGCATTACTTAATATCCTAAGCAGTCATCATTTGGCCTACCACAGCAATATCTAACTGAAGAGTTCACACTATTCTAGGGTGAATAAAGGAGGTAAAAATCTCAAAGACATTCCAGAAATAGAAATAACGAATTCTTGCATTTGATTGTGAGCCCTTTCTAGCCCCCAGTTTCCTAACCCTTGTGAAGGGAAGGACAGACAGTAAAGGGGAAACACGTGTAAACCAGGTGCTTGTGCCCGTGCTGAACTGTGGAACTGTGAGGTAGATCTGTAACAAGGACAAGGAAGTTGTGGGCCATACCCGGGAGAATGGAGGTTCATTTGAAATGGAAGTGGACAGGCCAGGGAGAAGCAGCAGTGGTAGCTGGGCTGAGAGAGCACCTACCTCTCTCATTACTAGTCTCGTGGGGAGCACCTCTAGGGAGGTGCCGCAGAATTCAGCAAAGAGGAGAAGGGGGATAGAGCTCACAGGCCTGGCTCAGCTGTTGAAAGAAGACCCTCCTACAAAAGGAAAGGGTAAAAGCGAGGGTGAAGGCGAGATCTGCTAATGCCTGGAAGGAGTTAAAAGCAGGTAGCACAGAAATGGCATAGTTGGTTTAGGAGGGAATCAGGCAGGGGTTAATGTGGCAAGGCACAAGGTTAGACCTAGCCCTTACAGACTGGCTGTCATAATACCACCCTCTTTGAAGTTGGTCTAGCAGAGCCTGGGGACAAGTTTAGACCTGATCACTGACCCAAGTTTATTGCCCTAGGCCAAGAAGGTCGAGGTAAACTGCTAATAAGTGCAATGCTGCTGCTCTCCCAGAAGGTGGGGCACGTGCACGAAAGAACTTTTAGATGTTTACACTCCATTCCAGCAAGCCCTCACACTGCACCTTTGTGGAGCAAAATAACAACCCACAAGTAGGCACCCCAAACGGCAGACACTGAAGCAGCAGGGGATAAGCAATGCAGGCACCAAGGGGCTAAATGAGCTCACTGATCAGTAAGTCAGGAAAAGAAGAATGGAACTGGGCTGAGGTGGCCTGATCCAGGGCGGGTCAGTAAAGCAACAAAGTCTAGTCCTCACACTCAGTGCAAGTAATGTCCCCCTACTACACCATCTATTCCTGACACGGGGTATTTATTTACTCTTTAGAGCCACTAGGCTTCCTAGTCCTGGGCAGCTCTTCCAATCCTTTGGTTAAAAATACTCTAAAAATAACCTCTCTCCCCAATGTCATTTCTACATCTTCCCTAACCTCGACCCAAACCCTCCTCCAAAAAGCCTCGGGTCTGAGTATCCAGAGTGAGACAGGAGCAGTAATAATATTGGCATGAGGTGGGACAGGCAGGCACTAAGCCTAATAAAGGATTATATCATCTGAGAAAGTGATTCTAGTATGTTCTATTTGACTGAAAAGAGAAAAATACCAAGTAGTAAAATATTTTAAGAATGTTAACGAGCACTGTAATGATCAAGGGTGAGATGTGAAGTACAGGGAGAGTACGACCTGGGTTCCATGAAGACAGGATTCGGAAAACACTAGCATAGTTTAAAGAGCCCAGCGCAGGGCTATGAGCCTGCAGACGCCCCTGTAATTCCTCAGCAGCTCCACTGCCACCAGTGGGCCATTCTGAGAGAGAAAAACTGGCCCTTATTCCTTCTCCTTTTCCCACTCAATCATGTTATGAACTGTCAGAAATGAACTAACAATTAGGGGGAAAGTATCATGAGTGTAACCCAAAAGGGTCCAAACAAAATTCCACGATGCCATTAACCACTACAAAAATAACCTCAGGCTCTCACTCCATCGCTTCCCATGCCCAAACCAGAAACATTCATTAATAAAATCCATTAAGCAGATTCACATGAGGAAAACGGACAAAAGGTAACTTCATAATTTTAAAACAAAACAATGCAAAATAAGAGCCATTTAAACATTTAAATACAGAGAAAGTAGAACCAAGAATTCTGAGAGGCAGAGAAGGGGCAGCACTAATGTCAACAGCTTCTGTATATGAAAGGCCCTCCTTTCACTAAACCTCCAAGCAAAGCAAGGTTCCCCCAAACTACTATTAATTAACTGAACTAGACTCTTCTCTTTTTCTTCAAGGCCCCTGAAGAGACCTATGGTGTACTTTTCTGACTAAGGACTAGAGACTCGGAAACAAGAGCTACCTGCCCAGGCAAACCCTCCCAGAAGGTTACTGGACTTGGGGCTGTTTTACATCAGATAAAGCCTTCCTGAGGTTGGAAGTTACCCATGAGAAAACTGTAGCAATTTCATCTTTTATATTTTCCATCTTACCTATTATCCCCTACCTGCTGTCTGCTGCCTCTACTTCCTCACCCTCAGGATGCACAAGAGGACTTGGGGGTGGGGAGCATCAGGACTCTCAACTCTGGGATGGGCAAAGGGAAGGGCGAGCTGGGCCCAAGCTCTGTGTACAACTGACATCACAGCTTCTTCCCGCCCTGGAGCATCTCCTTCCTCTCCCTACAGCCAGCCTACTGAACACCTGTTTCCCCATTCTCCATCATCGGGCTTTCCATCTGTCTGGGGGAAACATACCTGACCTGGAAGTGAAGGAGAGCAGCACTCTCCTTTCAGTGTAGAAGGGAGTGACTGGGAAGAGAAGGTGCAGGACCGATGGGCAAAGGCTTCCTCCAATCTGTCTCCAGGTACGTAGCCAGGTTTTGCAGAAGGAGATGGGGTTGAAGAGCAAAACAGAGCCTTGTTGTGAAGGGCTCCTGACCTTGGGAATACTGAGATGGGATTTATTGCTCTTTTCTCTCCTAGCTCCCTGCTGTCCTTCCACAAGGAAAATTATTTTTGACATCCTGGTTCCCTGGGAAAGGGGCCCAAATGCTCTGGACAGTTACAAAGAACTTTGTCCTTTCCCACCCCAGCATAGCACACACACACACAGAGACCAGCCCCCACCTCGATCCCTCTCAATGTGTGTGTGCACGTGGCCTGAACCCTTCAAGGGCAGCCCTTGCTGTATACATAGAGGTGCCAAAGGTCAAAGCCTGGGAAAAATTCAAGAACCTCAGTTCTCTCTCAACTAGTTGCCTGGGGCTCAAAAGGCACTGTGTGTCCAGGGCTGGGAATTTACCAAGTCCTCTGGTACACAGGCAGGCTTGACACTGTCTTCATCAAGGTTTCCTAACCGTGGCACTACTGACATTTTGAGTCAGAGTTCTTTGGTCTGGGGAGCCAGGTCTCTCCTGTGCACTACAGGGTATTCAGCAGCATCGCTCGTCTTCAGCCACTAGATGGCAGCAGCACACAGCCTCACGCCCAGACATGACCACGAAAAAATGTCTCCAGAGACTGCCTAATGGCCTCTCTGAGAATCACTGGTCTAAAGGTGAAGCCGCTGATGGTCCACGGTGGGGAAGGAACCTAAGTGGATTCAGCAAGGTCACAAATGCAAAGGCTCTGAGCATGGCAATGACATGCAACAGGGAAGAGAGGGGCCCTGAGACCCAGGGCAGAAAAGATCCTCCGGGAAGCAAAAAGCAGGTATTCCTGAAAAGCTGTAGCTGGAGAAGACATTTTCTCAGAAGGTGTGGTTCTGGCCTCGGCAGTGAGAAGAATTAGTTAGAAGTCAGTAGGTCTGTTCCTCTGGAACT EMBV3_31026 CTCCTCTTCTCGTCTCTGTGGACCTTCTAAGGATGCTCATCACTGGATTTAGGGCCTATG Gene BVT0102_161306 + 1 EMBV3_21937 GK000018.2:24135545-24163232 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085763 TCONS_00085762 TCONS_00085765 TCONS_00085760 TCONS_00085761 TCONS_00085764 1 XLOC_051958 NonCoding TCONS_00085762 XLOC_051958 NonCoding NonCoding - 18:24135811-24138996 - TSS63963 1217 2 TCONS_00085762_2 67 0.195562859490551 2 0.618404522613065 0.000316057024269365 0.000947461422470133 0.000344493244626074 0.000502862249780291 4.09519749102973e-54 2.40551719673782e-09 1.82491841555987e-62 0.000146388557359774 0.00074387279685188 5.70124694036245e-110 1.88100868601324e-06 3.93554992254158e-42 2.76525271056232e-06 0 4.81133631099279e-31 0 0 0 9.90052220702421e-05 0.000128556106431806 0.000334400220445742 0 0 1.37753872616449e-05 0.00480131622533597 0.000196286236482072 0.0016905339777845 0 0 0.000143265920208603 XR_240477.1 LOC101903245 PREDICTED: Bos taurus uncharacterized LOC101903245 (LOC101903245), 3e-09 68.0 74.53 0.0862777321281841 NR_040064.1 LINC00862 Homo sapiens long intergenic non-protein coding RNA 862 (LINC00862), non-coding RNA. 3e-21 107 81.74 0.0912078882497946 0 noncoding 1 0 1 0 -1.75733448652366 0.0756641693139699 0.0284913299496393 0.569223354344738 GTGCTCGAGGTGGTGGAATTGAAAGTGCCTGAAGCCACTGTTGCGAAGCCACCTGGGCTTCACGTTAAATACCTTGGGGTTGTTGTTGTTTGGTCACTAAATCATGTCCAGATAGGAGATGATAGTGTCTCCTCTTTGGACTTTTTTTCTTCCTTCTTTTTCCTCTTCCTTCAACTTTATCGAAACTGAAGACTCATGAGCCAACACGTGCAAAGCCTGGAGAAAGCTTAGCTCGCTCCTTGTCTGAGGCCATTTGGAGGCCCCCTGGAAGCCAATATTTTTGAGGGTGCAGAGTTTCCAACCAACATTTTCAAGTGCTTGTCCAGCTCTGATTTAGAAGAGGCTCAGCTTTGCCAGAGGGGAGCGGAGTAGGGCCTGGTCTGTCCTGGCGAGTCTCAGTCACTCCATCTTCCTGGGAAGCAGCCTCAGGACCACCTCCAAAGGGGGAGGGCTGCAAATCCTCCACAGGGATTAAGTGTCCTGACTTGCTGAGTGAGGACACAGTCTTATAACAAAAGACATGAACTGTTCTGTGTCCAGCTTCTGCGGCTGCTGGCCCCATCACTCCAGTCTCTGCTCCCATGGTCACATCGTCCCCTCCTCTTCTCGTCTCTGTGGACCTTCTAAGGATGCTCATCACTGGATTTAGGGCCTATGTGGATAATCCAGGATGATCTCATCTCAAGATTCTTAATTTAATTACATCTGCAAAGCCCTCCTTTCCAAATAAAGTAATAACCACAGATTCTAGGATTTGACATTGATATCTCTTGAGCGGCCAGTTTTCAGCCAACCACAGGCTCAAGGGACTCAGAAACTCAGCAGGAGGAACAGATAAAAGGAGAGAGGCTTCCCTCTGAAGCTGAGATGCAGCCACCTAGCATCACCACCCCTCCCCCCCAAAACTGCCGCTGGTCACCCCAGTCCTGCACTGCAGGGCTCCCAGAGCAGGTCCTTCCCGAGACAGTTTGTGAGGGCCCTTGGGTGGGGGCGGGGTGTGTTCTCTCCCCATCAGACACGCAGTCCTGGAGCAGCGGAATGGCTCAGCGCACGCTGGGAATCCCAGAATAAGGGATGACGGCGGTGGAGAGAAAGAGAAGCAGGAAAGGGCTGGGAAATAAGAGAGCCTTTGCTCTCCCTCCGCCTTCAGAGGCGGGAAGTGTGCACTTTCTGCGGGGAGGCGGCTGCAGCGGTGGACAAGGGCGGACAGGCGGGCG TCONS_00085759 s 5' 268 TCONS_00082607 r 5' 0 EMBV3_36186 TTATTTGGAAAAGACTGGAGAACTGAAACTGCTGGCGGGGGCGCGTCTCCACGCTACTGG Variant GeneID:534297|METRNL:XM_002696106:183_cdna 480^841 5 EMBV3_04459 GeneID:534297 19 GENE METRNL NULL meteorin, glial cell differentiation regulator-like EMBV3_24175 TAGCTGGAGTGCTTGACCAGAGCCGAATGCAGCGGGAGAAGATGGTTTACATGGCAGTTA Gene GeneID:526026|ZNF711:XM_002699948:34_cdna UTR3_Alt 2 NULL GeneID:526026 X GENE ZNF711 NULL zinc finger protein 711 EMBV3_24897 GCCGGCCGAGCAGAGGGCCGCGGACACCAGGAGGAATGCAGTGGACGCTTTTCGGGTCAA Variant GeneID:517446|AP2M1:NM_001034523:31_cdna 56^172 1 EMBV3_32772 GeneID:517446 1 GENE AP2M1 MGC128246 adaptor-related protein complex 2, mu 1 subunit EMBV3_38223 TGGAGTCTGGGCACGGAATCCCCAATATCGTTAGAAATCCTGTGTTCTGTCAACATTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34196 GAGCCCCACCTGCAAGATCCAGAAGCTCAGGCTAGAGTACTGCAGCCTGACAGCCGCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13141 TCTTTGCTTGCTGGATTAGATCCTTCCAAGGAGCTGAAAGAGAAGATGGACGAGCTCCTG Variant GeneID:538499|OLFM3:NM_001098094:158_cdna 498^800 1 EMBV3_39784 GeneID:538499 3 GENE OLFM3 MGC148672 olfactomedin 3 EMBV3_04192 CCAGGCCCAGGTTGAGACAGCCTTAAGAGACACTGGTAAGATGGCTAGATCCATTGATAC Gene BVV0102_242933 - 0 NULL GK000025.2:34085619-34092803 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26604 CTAGGAAGATGGTGGCAGAAAAAGAGACCCTGAGCTTAAACAAATGCCCAGCCAAGCTGC Gene GeneID:767959|PACRG:NM_001077027:4_cdna Constitutive 0 NULL GeneID:767959 9 GENE PACRG MGC134579 MGC159453 PARK2 co-regulated EMBV3_12392 GTTTAACGGCAGCGCCTTCGCCTTATACCTCTCAGCTGCTATTGTGGACGCATCTTCCGT Gene GeneID:533671|CMTM8:NM_001046358:149_cdna Constitutive 0 NULL GeneID:533671 22 GENE CMTM8 MGC140079 CKLF-like MARVEL transmembrane domain containing 8 EMBV3_06484 AGGAAGCGGTTTTAGGTCCCTTTTCCAGAAGACAAAACTGAGGCTGAGAGAGGTCAAATG Gene GeneID:511376|TMEM199:NM_001075512:97_cdna Constitutive 0 NULL GeneID:511376 19 GENE TMEM199 MGC137613 transmembrane protein 199 EMBV3_41209 CGAAGGACAGCATTCCACTGGTCACGGTTTCTCCAAGTGTACACCGACTCTGCTACTTTA Gene BVT0102_030544 + 0 NULL GK000022.2:15882044-15934721 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126224 TCONS_00126231 TCONS_00126242 TCONS_00126243 TCONS_00126226 TCONS_00126233 TCONS_00126236 TCONS_00126229 TCONS_00126238 TCONS_00126237 TCONS_00126232 TCONS_00126228 TCONS_00126234 TCONS_00126223 TCONS_00126230 1 XLOC_077397 Coding TCONS_00126223 XLOC_077397 Coding Coding SNRK 22:15783910-15927350 j TSS94744 6124 1 TCONS_00126223_3 809 0.0947093403004572 10 0.957375609143957 0.00437139769290048 2.51763654774803e-14 0.00436282523629026 4.63463117603684e-11 0.00357552991450146 7.88072351978939e-13 1.68668555832245e-20 0.00319002579944779 1.94034169644268e-07 0.000696834794625435 2.40769722551587e-07 5.66732160360086e-09 0.00102204126404006 0.00204999644385109 0.000839258588276742 2.04819106142406e-13 2.10631677053573e-23 8.07274049134304e-21 0.00265973851509437 0.00335659923426001 2.0536358832924e-07 8.93597764951621e-27 2.26988300582408e-17 1.12262137304931e-27 0.00150699593074394 0.00434466294979416 0.00251851535881621 4.80428269748311e-06 1.54076573807803e-30 2.1358291545346e-27 XM_002702734.2 SNRK PREDICTED: Bos taurus SNF related kinase (SNRK), mRNA. 0.0 4250 100.00 0.384552580013063 XM_005265245.1 SNRK PREDICTED: Homo sapiens SNF related kinase (SNRK), transcript 0.0 2397 82.76 0.385205747877204 TCONS_00126223_3 sp|Q9NRH2|SNRK_HUMAN SNRK_HUMAN SNF-related serine/threonine-protein kinase; 0.0 1211 94.97 0.80964153275649 3 coding 0 0 0 0 -0.040311935705413 0.697956571227741 -0.00562447684635249 0.930624309290764 CGGGTACAAAGGCGCGCGCGCGTGTGCGTGTGCGCACACTCACGTGACTTCCATTCCCGGGTGAGGAGTACCGTATACTGTTCCTTCTTAAGACGGCTGCCTCCCAGTCCGGTCCTGCACTCCAGCTTCCCAAGAAACACTGGAGATGAATAAATGATTCACCACGTGGCCAGGACTGCAGCCCTTTCTCTGGAAGAGAATTCAAGCCCACTTTATTTAAACCAAGGGGCTACAGACCTGGTGGTGGAGGTCTTCAACCACTGGAATTCCCTTGGGAGACCATTAGAATGGAAAAAGAAGCGATTAACAAAACACAGTGATAACAAGGATTACTCCACATGCAATTTGCAGGATGTCCATGACGATATTGAAAATGAATTCCTTATTTTCACCAGATATATGAGAAGATCCATTTTAAACAGTCTAAATATTTTTTCTCACGTCGGACCAGCATGGCAGGATTCAAGCGAGGGTGAAAAAGTGGCAGTAAAAGTTATTGACAAGACAAAATTGGACACACTAGCCACTGGCCATCTTTTCCAAGAGGTGAGATGCATGAAGCTCGTGCAGCACCCCAACATCGTGCGCCTTTACGAAGTGATCGACACCCAGACCAAACTTTATCTTATCCTGGAACTCGGGGATGGAGGAGACATGTTCGATTACATAATGAAGCATGAGGAGGGACTCAATGAAGACTTGGCCAAGAAGTACTTTGCTCAGATAGTTCACGCCATATCTTATTGCCATAAACTCCATGTGGTTCACAGAGACTTAAAACCTGAGAATGTGGTCTTCTTTGAAAAGCAAGGTCTTGTAAAGCTGACAGACTTTGGTTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACGAGCTGTGGCTCTCTTGCATATTCTGCCCCAGAAATTCTGCTTGGTGACGAGTACGATGCACCCGCAGTAGATATATGGAGTCTGGGAGTGATCCTTTTCATGCTGGTGTGTGGGCAGCCACCCTTCCAAGAGGCCAATGACAGTGAAACGTTGACCATGATCATGGACTGCAAGTACACAGTGCCATCCCACGTGTCCAAAGAGTGTAAGGACCTGATCACACGAATGCTGCAGAGAGATCCCAAGAGGAGGGCCTCTTTAGAAGAGATTGAAAACCATCCTTGGCTTCAAGGAGTGGACCCTTCCCCAGCCACGAAGTATAACATCCCGCTCGTGTCATATAAAAACCTGTCAGAAGAGGAGCACAACAGCATCATCCAGCGCATGGTGCTCGGGGACATAGCGGACCGCGACGCCATCGTCGAGGCCCTGGAAACCAACAGGTACAACCACATCACAGCCACTTACTTCTTGCTTGCTGAAAGGATCCTGAGGGAAAAGCAAGAGAAAGAAATACAAACCAGATCTGCAAGCCCTAGCAACATTAAGGCCCAGTTTAGGCAGTCCTGGCCAACCAAAATTGATGTGCCCCAGGACCTTGAGGATGACCTCACGGCCACTCCTTTGTCCCACGCGACTGTCCCTCAGTCTCCTGCTCGGGCCACCGACAGTGTCCTCAACGGGCACAGGAGCAAAGGCCTTTGTGACTCGGCCAAGAAGGAGGACCTCCCCGAGCTGGCGGGGCCCGCGCTGTCCTCGGGGCCACAGGCCGGCCTGAAGCCCGCAGCCAGTGGGCGGAAGTGCCTGTTCCGGGTGGAGGAGGATGAGGAGGAGGACGAGGAGGACAAGAAGCCCATGTCCCTCTCGACCCAGGTGGTGCTGCGCCGCAAGCCGTCCGTGACCAACCGGCTGACATCCCGCAAGAGCGCGCCGGTGCTCAACCAGATCTTCGAGGAGGGGGAGTCGGACGACGAGTTCGACATGGACGAGAACCTGCCGCCCAAGCTGAGCCGCCTCAAGATGAACATCGCCTCCCCGGGCACGGTGCACAAGCGCTACCACCGCCGGAAAAGTCAGGGCCGTGGCTCCAGCTGCAGCAGCTCGGAGACCAGCGACGACGACTCGGAGAGCCGCCGGCGGCTGGACAAGGACAGCGGCTTCACGTACTCCTGGCACCGCCGGGACAGCAGCGAGGGGCCCCCGGGCAGCGAGGGCGACGGTGGCGGCCAGAGCAAGCCGAGCCGCGGCGGCGGGGGCGCGGACAAGGCCAGCCCCAGCGAGCACAGCGCCGGCGGCGGCGGCCCCACGGGGGGCTCGGGTGGCGCCCCGGGCGGCACGTCGGGCAGCGCGCGCCGCTGCGCCGGGCCCGGCTCGTCCACATCCACGCAGCTGGCCGCGCGCGGCGCCGGGGAACTGGTGGAGAGCCTCAAACTCATGGGCCTCTGCCTCGGCTCGCAGCTGCATGGCAGCGCCAAGTACATTCTTGACCCGCAGAGCGGCCTGTCCTTCTCCAGCGTGAAGGTCCAGGAGAAGTCCGCCTGGAAGATGTGCATCGGCTCCACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGATGATCAGGATTAAATTAAAATGTATATTTGGAACCTAATATCCATGGAGCACTTAGAAATTTGATGTTCTGCACTTAACTTAGAGAAAATGCTTTTCCTTGTGAAAAATCTAAATTCCCGCCCCGACCTTCAGTGACATGGGAACTCCGTGCTCTGAGGCATACTCTGGTGTCTGAGACAGAACCAAAGCAATAACCTTGTGATGCCGATAGGCCTGGAGCCTGCAGGCGTGGGGTGCCCAGCCTCCAGGGCCTGTGCAGAGCAGAGTGCAGCAAGCGTCTGCACCGACAACCGTAAAACCATGATTTCAGCATAACCCACACCTGTTTGTCTTAAGCTATAGTGTGAAAACAGTTTGGGCTCTTAAAATTTAACTGAAAAAGATGTTCTTGTTTTGTACTAGGTGAGAAAGTACATAGATTCATAAGGCAGCTTCCTCCGCAGTGGTCAGTCGCAAGCAGACAGTCTCATTTTGTAATGTGGTAACGTGAACTGAAGATGTCTCACCTTGACTTCTAGAGTGTGTGTCTGTCTAACAGAACAAAAGGATGCTTGGTGTAAATTCCCTTGAAGAGGGCGTACCCCAGGCTTCCTGGACAACCATGTAGGTAGAAGAAACGCTAGGGCCTAAATAACGTGGAAGCAAAGGTGTTGGCAAAGTCAAAACCCCATTAAAAAAAAAAATTTTGGCATTTGATTTTTAGGACTTTGATAATTAGGTTGTCTGTTGGTAACTTCCATTCTTTTATGTCCTTTAGCTCAACTACCTATGGGAATTGGCTGATTAAAAAGATTAAAACGGTTGAATACACAAACAGCCAACAAAAATGCACAAAGCCTGCTTTGTTTTTTCTTTTTGTTTTTTGCTGGAAGTGTTTTTTACCTTACCTTCCTGCCAGAACAATAATCAAAGAACTCTTGCTTTAAAACTACTCCTGTACAAGACTACTCTTGACCAGATAATCATCTTTCGTGGCTTTTATCTTGTAGGACACAGTATCATTTTGGGAAGGGGCGAGATGCTACTTTTTCTTGCTGTGCCCAGAGGGTCTTAAAAGCAGCGCTTAGTGACATTGGTTATAGGACGTGGCCGGTCCCTCTGGCTTTCGCACGCTCCCCAGCGTCCGTCCTGTCTGAGTGACGGTTGTCTGGTCTGTAGAGTGGGCGGAGCAGCGAAGGACAGCATTCCACTGGTCACGGTTTCTCCAAGTGTACACCGACTCTGCTACTTTAGGATTCATGTATTTTACTCGGAACTCTGAATTTCACAGTATGCTTACTAACCTAAGTAAAGATGATACTCAAAATACCTATTTTACTTTCTAGACCTAGACTAGATAACGTTTTAAGCTACAGCTCTAGTTCATTGTGATGTTTATAATTGAAAGCTATGAGAATAGATGTGTGGGTGAAGCCATAGAACATATTTGCTTGAAATTTATTGAGCAGGGATCTTATAAAGGGCCAGAAATAAGATGTGTGGTTCACATAGATAGTGAGCGTAACATCTGTATTAAACGTCAGAGAGAAGTTTATAAAGGGCATTGGCAATAAACTCTTTGTTGCAGCTGTTTTCCAAGTAATGTAAATACTTTTTCCTGTGATTATGTATAGCCTTGGAATGGCACCTTTTAACTAACCCGTATGTGTTTGGTTTTCAATCGTTTTTTATATTCAAATGTATATATGGTGCTCACTTTTAGGATCAGCAGTGTTGACCATTATGCTGCATAGCTGTATCATAGCCTTACTAGTCGTGTGTGGTTGGTTGGCCCTCTGGGTAGACAGATGTTAGTCTGCGTGGCGTCTTACCCCTTGTTCATCAGTGAATGACTGTGCATGTGTTGTATGTCATAGTATGTCGTCACATAAAAGGGAGGGAGCAAATAACCATTATGTTAAGATAATATTGGACCAAATGACTTACTTGCTCTAAACAGTTTCTTGTACCCCTTAACCTGTCTTCAGAAGTTGCAGAGTTACAGTAGTGTGTAAATTAAATATTGTGGAAAAACAATTAGTCTTGTATTTTCTGTATGTGTGTGTGTATATATATATATACATTATATATATATATAAAATTATGTACTTCTGGCAATTCTATCTGTATTTAAAGTTGTGACAATCTTGACACCGATTTTAAGAATAGCCGTGAGACTGAATCAAATTAAAGATGTCCCTTCCAAGTTAGAATCGATGTGTGTTAAGAGGGTACAGAATTATCAGCTGATTTTGGCTGGTTGCTTCCACTGCTGGTTGATTTTCCTCATTGTATAAACATTGACAGGTATGTGACAAATGGGAAAAAACAAAGTCCAAATAATAAAGTGGCATATTGGTGTTCAGCAATATAAACTGTCCCATGTTCTGTTTCTTCTCATGAGCGCAGCTGTGTGTAGCCCTGGCCTGGGTTAGACCGACGCTCTACATGCTGTGTGTGCGCCTGCTTCGCCAGATGTGACTGGAAAAATGCGATCGTGACTGTTCTCACTTTAAACTCGTGACCACAAGTCTCAGGTGGGTGTCAGGACTGTCCCTTAGTTAAACTGTATTTCCCCAGTTACCTGCTTTCTTCACTCGGCCAGTCACTATCCTCCCGATAAGTAAACCAGAGCAGCTGTAAGCGCCCCGAGCCCCCGTCTCTGTCTGCCGCCTTGCCGTGTATTCGCGCGCCCTGTTGTCCACTTGCCCGGCCCTTCTTCCGGTGGGGTGATTCCGAGGCAGCCCTGCCTCTTGCCCGCGCAGATGCACAGGCGTCAGGGCGCCAGACCCGAGTACGTCGCCATTCTTTTCTTCGCCTTGCACCATCAACCTTTGCTTTTCCACTGGATCGTTCCTAACAGCAAACAAACACGATTTTATCCCCCTTTCGTGTTTCTGCTCTCCCTCTAGCTGTTGTCCCTTTCCTCCTTCCATTCTCCTCTCTGAACCCTTCCAGCCAGGCAGGACTGCTGTCCCTGTACCAAAACTGCTTTGCTCAAGGTCAGCAGTGACCTCCTCCCTGTGCTAAACCCAACAGTCAATTTTTAGAAACAGCTTTGAGATGTAATCCACATACCACATAATCCACCTATTGACATTGTACAGTTCAGTAGATTTTAGTAAATTAGAAGAGTTGGGCAACCATAAGCCCAAAAAGAAACCTTGTACCCTTGAGTACATTCTCCCTTTATCCTCAACTTCCAGCCCAGCCTCAGCCAGACAAACCCTGATCCAGTGGTGAGTTCCAGTCCCATGTTAGCGTTTAATGAGCGCTTGTCCTTGCAAACTCTGCATTGCTCAGGACCCGACTTCTTGCTGCTCTTCAGTCTGCTAGCTCCACAGTCTCCCAACTGCTAAACTCGGAGTACCGCAGGATTCAATTCTGGATCTTTTCTATATCTACACACAGTCTCTTGATGATCCCATTCAGCTTTGTGCTGACAGAAAACCTGAAATACATTTAGCCCACATCTCTTGACAGGAACGCCAGATTCCAACTACCCATGTGATTTCTCTCCTTAGATGCATCTGATAAGCACCTCAATTTGTACAACTTCCGAACGCCTTCCTAATCCCCCTCAAATCTTTACCCTTTCC EMBV3_41150 TTCTGCAGTAAACAAACACCACGTTTTCTGTGGGTGGACACAGTGCAGGTCCGCTTCTGA Gene BVT0102_324075 + 0 NULL GK000011.2:44365503-44451546 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027724 1 XLOC_015314 NonCoding TCONS_00027724 XLOC_015314 NonCoding NonCoding - 11:44372761-44374763 - TSS19588 378 1 TCONS_00027724_1 41 2 0.812093953023488 0 0 7.34444208346196e-05 0.000439373444429326 0 0 0.000123422841316548 9.38844090965351e-05 0 0 0 0 0 0 0 0 0 0 0.000151765792187782 0.00102734821709592 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.753244567489437 0.00910499058743222 0.117519230799758 0.0461434178824862 GCCTGAGGAGAGGCTATGGTGTGGAGCTCCGATTCTGAGGATCAGATTTAATTCAGGACCTTGATGGCTTCATGAAATGGCATTTGTGTCTAACTGCAGGTCACCAAGGTTCTTCACCACCAGCGTCACCTGGAAAGCCTGGAGCAGAGGTGATGTGTGTCATTAAGGCCCAGTCCTCCAGCTGCAGGGAGCTCTGAACCCCAAGCAAGCCGGGCAGCACCAGGCAGGGTGTGGGTCCCACACCATCACCCCTACCACCTGGGATGCTGCCCTCCACATGAGTCAGAAGCGGACCTGCACTGTGTCCACCCACAGAAAACGTGGTGTTTGTTTACTGCAGAAACCATCAGTACCCTAATAAAAGTGTACACGGTGACT TCONS_00027722 TCONS_00027723 s 5' 7260 TCONS_00027722 TCONS_00027723 s 5' 7529 EMBV3_06689 CGAAATTATCCTGGGGGAGACCAAAGCCTATGTGTTCTTTGAGCGGAGCTATGGGGACAT Gene GeneID:352960|TRIB2:NM_178317:45_cdna UTR3_Alt 2 NULL GeneID:352960 11 GENE TRIB2 TRB-2 TRB2 tribbles homolog 2 (Drosophila) EMBV3_12788 GGATAGTGAACCACTGGTGAGCCGTCTGGGTGTTCCAAAGGGAGACAGAAATCCACAATA Gene BVV0102_253485 - 1 EMBV3_05145 GK000011.2:4424371-4425379 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023826 1 XLOC_014369 Coding TCONS_00023826 XLOC_014369 NonCoding Coding EIF5B 11:4424900-4450690 j TSS17637 735 1 TCONS_00023826_3 93 2 0.971577028965838 0.00118553916310703 3.47706663869927e-05 0.000265121703518429 0 3.23902755562669e-05 9.21772197608958e-05 2.97371706504502e-207 6.0232056958283e-173 9.74284254695521e-05 1.37966649885001e-05 3.46053227109158e-06 0.000119041970446228 0 9.25640881090597e-05 0 0 0 8.65710356954804e-05 0.00281328289541418 0.00879534364982396 0.00444491586693132 0 0 7.53599932539939e-05 0.0491077112007388 0.0208020138944553 0.0132104092193982 2.41228206769754e-05 7.23569119192402e-124 0 XM_005193822.1 EIF5B PREDICTED: Bos taurus eukaryotic translation initiation factor 5B (EIF5B), transcript variant X2, mRNA. 1e-157 560 100.00 0.420408163265306 NM_198303.2 Eif5b Mus musculus eukaryotic translation initiation factor 5B (Eif5b), 1e-106 390 87.58 0.425850340136054 0 noncoding 0 0 0 0 -0.328831560959009 0.144187871642501 0.0236706490168197 0.614726782222711 GTCTTTTTTAATGGTTTCTGTTTATTTGTTTTGGTAATTCATGGACATGACTACGAGGCTCAATATTGTGGATTTCTGTCTCCCTTTGGAACACCCAGACGGCTCACCAGTGGTTCACTATCCTTCTTTATTGAACTTCACGCAGCTGAGTACAAAGGGACAGAGGTTAAAGGTGGAAGGGAAGCCCAAAGTCTACTTTTGAACTGAGATCCAATTCCCCAACTCTGCGTCCCCCAGCAGGGAGAGACCCGACGGGGGAAATTTCCAACCTCATTGTCCACCTCGGGGTTCTAGAATCTTGAAACCCCGCGGACCTCGGAGCGCCGCGGACGCGTGCCGGAAGGGGGCGCTCCGGTTTCCGCCTGACGGGCGGGGTAACTAGAGACGCTCTACCCGCGGCGCAGCTCTCGATGAGCCGCGCCCTGCGTCCCCACGCCGAGGCGGCGGGGCGATGCGCTTGCGCACTCGGAGCTCACACCATATGTGCCCTGTCCCAGTGCGCGGGTCTGTGGAGAGCCGGGTGCGAGAGGAGGCAGCGCGAGGGGCACGGAGCCGAGCGGAGACCGAAGTCAGCCGAGGGACAGCGGGTCTGTGAGAGACCAAGTAGAGGGGCTGGGGCTGCGAGCGCCGCTGACACACGATGGGGAAGAAGCAGAAAAACAAGAACGAAGACAGAGGAGTGTGGCCTCTGAAAACACTGCCTTGATTGAGTACCATGGAAAATTGCCTTTTATT EMBV3_02035 AGGAGGACCTAGAGGAGGTATCCAATGTTGAAGGTCAAGAAGGGCGACGGTGAGGAGATA Gene BVT0102_179581 + 1 EMBV3_22829 GK000002.2:75995495-76541397 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186078 1 XLOC_112131 NonCoding TCONS_00186078 XLOC_112131 NonCoding NonCoding - 4:14677153-14677413 - TSS138446 260 1 TCONS_00186078_1 35 0.996153846153846 1 0 0 0.000154591300226724 0.00142131908226542 0 2.7127384259144e-06 0 0 0 0 0 0 0 0 0 0 0 7.29769564955231e-05 0 0 0 4.02169161372688e-05 0 0 0 0 2.70979316474149e-06 0 0 0 0 XR_238496.1 ZNF845 PREDICTED: Bos taurus zinc finger protein 845 (ZNF845), transcript 6e-47 190 78.15 0.907692307692308 0 noncoding AGGTCGGGGGCGGTGACGAGAGGAGTTACCCAGCGTCCGAGGTCAGGGCCGGCGGCCGGGAGGAGCTACCCCATGCCCCCACGCCCGAGGCCAGGGGCGGTGGCTGGGAGGACCAACCCCACGTCCAAGGAGCCTGACTGCAGGGGCGCAGGAGGGCCTAGAGGAGCTATCCCATGTTGAAGGTCAAGAAGGGCAGCGGTGAGGAGATACCCCTCGTCCAAGGTAAGGAGCAGCGGCTGCACTTTGCTGGAGCAGCTGTG TCONS_00180882 TCONS_00180883 TCONS_00180885 TCONS_00180886 . 3' 223570 TCONS_00180882 TCONS_00180883 TCONS_00180885 TCONS_00180886 . 3' 223829 EMBV3_01724 GCTCTTGCCTTCTGTGCAGCTCTCAGTGGCAGGGCTTTGGGGCTATTCTATATGAAAGAA Gene GeneID:317704|SLCO2B1:NM_174843:10_cdna Constitutive 0 NULL GeneID:317704 15 GENE SLCO2B1 MGC138115 OATP-B SLC21A9 solute carrier organic anion transporter family, member 2B1 EMBV3_20887 AGGTCCAACCTACTCCATCACTTTTTCTGTGATGTTCCAGCAGTCGTGGCTCTCTCTTGC Gene GeneID:617507|LOC617507:XM_002693793:101_cdna Constitutive 0 NULL GeneID:617507 15 GENE LOC617507 NULL similar to Olfactory receptor 5B3 (Olfactory receptor OR11-239) EMBV3_24194 GCTCCCAGAGCTGCTGCGGCGGGCGGCCGAGCGCCTCGGGGTACACCCCACCAAGAAGCA Variant GeneID:617494|NDNL2:NM_001078080:142_cdna 407^619 1 EMBV3_02733 GeneID:617494 21 GENE NDNL2 NULL necdin-like 2 EMBV3_34261 AGTGCCTGGCCCTGGGCATGTCCCGAGATGAGCACCTGGTGCAGAACGTTTGCAAGTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40018 AGCACTGAGGACACAATATCACCTCCGTGGTAATCCTGCCAAAAATGCACAAACTGAATC Gene BVT0102_032972 + 0 NULL GK000002.2:127066838-127164649 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30071 TAGTTGACGATACCACGGTTGAGCCGGAAGGAGCACCATACTGGACCAACACAGAAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09433 GAACAGCAAACAGAAGAAGCTATAACCAGAGGGAACCGCCTTGGAAGCGACAGGCAATAG Gene BVV0102_206901 - 1 EMBV3_23486 GK000020.2:2610137-2680573 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12091 TGGCCAGTGCTGCTCGGCATGTGGCATCTTAATTGGATGTGGCATCTTAATTGGATCTGG Gene BVV0102_433320 + 0 NULL GK000015.2:28316321-28318410 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21757 ATCAATGCCTACATTAACACCACACACTCGCGCCTGACGCATATCAGCCCTCGCCACTAT Gene GeneID:540778|ZSWIM5:XM_002686428:402_cdna Constitutive 0 NULL GeneID:540778 3 GENE ZSWIM5 NULL zinc finger, SWIM-type containing 5 EMBV3_28123 CAGACCCCTTTGCCTTCTTAAACAACCCCATAGTGCCCATAGAATGTTAAATGAGGGACC Gene BVT0102_045448 + 1 EMBV3_12918 GK000019.2:27978471-27985493 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093101 1 XLOC_057078 NonCoding TCONS_00093101 XLOC_057078 NonCoding NonCoding LOC100847753 19:27965621-27980251 = TSS69928 1053 2 TCONS_00093101_2 96 2 0.92815640166792 0 0 0 0 0 0 0 0 0 3.90740141039224e-06 3.04355206115733e-05 0.00152467474907552 5.44971869147342e-06 0 3.89497443736197e-06 0.000250822184368741 0 0.000381248128118331 0 0 0 0 0 1.59208411739814e-05 0 0 0 5.47303642652818e-05 4.61026255377436e-06 0 NM_001678.3 ATP1B2 Homo sapiens ATPase, Na+/K+ transporting, beta 2 polypeptide (ATP1B2), mRNA. 0.0 657 79.47 0.681861348528015 0 noncoding 0 0 0 0 -0.151691224078384 0.35019091732919 -0.000510781999085094 0.991510345188889 ATTTAATTAATCCGCTGTCCCCTCCCCTGTCTCCCACACCTTCTGCCTTGTCTACCACAGTCGCTGTCTCAGTGGCTTTTGACTTGTGTGACTCCTTGGTCAGTCTTTCCCCACTTCTCTATCCCCATTCCCTCCACTGAAAGCGGGACCACTTGTAACTGAAGACATGATGGCTCTGTGGCCTTTTCCTTCTTTCCTGGCACAGCTGGTTTCTCACTCCACGTTGAATACGTGAGCTGGGAATGAAGGTCTGAAAGAAAAATCCCTGTTGATTCTTGAAAATTCTCTTCCTGGTCTCCTATCACGCCTCAGAGGGGCGGGGTTGACCTAGGCTGAATATGCACTTTGTTTTTGCCGATGGCTCCCTCCCCTCTGTTCCCTTTCCCAGAATATCCTGCAAGTTCTACTTCCCAGGCGCCCTGGGGGAGGGGCAGCCACTTTGGCTGGGTCCCCAGTGGCCACCTTGGAAACGTCAGCTGGTTATGGGACTATTCCATCTCCTTCCCCTCCGCCCAGATCTGCTCCCCCACCCCCATCCTCTCTGTGGCTTCTCTTAGCAAGTTATCAACTAATCACAAACTAACTCCTCCCCTTTCTTCCGCATGCCAGCCTGAAAATTGCAGATACCTCCTCCTTTTAAGACTCTGAATTTCTTGGCTCCATCTCCTTCAGACCCCTTTGCCTTCTTAAACAACCCCATAGTGCCCATAGAATGTTAAATGAGGGACCTTCTGTGTTCTTGAGTTATAGAGGCATTTTAACTCTTTCTTCTCCCACGCCCTTCACTTCCCCACCTGTAATTTCCCTGTTCTTTTTTGATGCTGCAGCTTCCACACCCCACCCATGGGTGGACCCTTCCCTGTTTTTCTCTGACTGGATCTGAGGCTCTTCCCTTTGGATCCCATTGTTTTCCTGCACTCCCCTCACCCAAGTGGTCTCTCTTTGCAGTTATTTAATGCCTGTGTCTGATCTACTGTAAAAAGAGGATAAAGTACAATAAAATGAGAGCAATTATATATATATATATAAAAATATATATATATCATACATGGA EMBV3_12015 GCAGCTCCCTGAAGAAAGATGAGACTAATGTGAAGATGGAGTCTGAGGGGGGTGCAGATG Gene GeneID:510852|HNRNPC:NM_001034395:49_cdna Constitutive 0 NULL GeneID:510852 10 GENE HNRNPC HNRPC MGC128837 heterogeneous nuclear ribonucleoprotein C (C1/C2) EMBV3_33595 TAGGATATGCCACTGAGTCAAGGGGACCAGATGCAAGAGAGGGGTGAGGATGTTGGCAAA Gene BVV0102_106718 + 0 NULL GK000008.2:75659671-75681764 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228142 1 XLOC_138440 Coding TCONS_00228142 XLOC_138440 Coding Coding TRIM35 8:75679295-75697613 = TSS170177 3951 1 TCONS_00228142_3 493 0.234877246266768 6 0.784626303433968 3.87406389693663e-06 0 9.36877331668504e-05 2.10178885787109e-06 5.49825176264463e-05 4.97944622983118e-06 6.59284177717027e-05 7.4850853672521e-07 2.59609360375596e-05 0.00143432851727341 0.000894584186967941 0.000526714293877407 0.000666668404977659 0.00152632793267233 0.00022123053556202 0.0035095103382084 0.00242457960981917 0.00739835429871457 7.80434987569609e-05 1.2741095454536e-05 7.68344475983792e-07 0.00265448394873185 0.00108435386569549 0.00112867401021826 5.40693006647981e-05 6.41955407718988e-05 1.85369604897412e-07 0.000760926437905856 0.000551689342967285 0.000496074749619156 XM_002689793.3 TRIM35 PREDICTED: Bos taurus tripartite motif containing 35 (TRIM35), 0.0 6729 100.00 0.944064793723108 NM_171982.3 TRIM35 Homo sapiens tripartite motif containing 35 (TRIM35), mRNA. 0.0 1934 82.51 0.488483928119463 TCONS_00228142_3 sp|Q9UPQ4|TRI35_HUMAN TRI35_HUMAN Tripartite motif-containing protein 35; 0.0 916 88.62 0.995943204868154 9 coding 0 0 0 0 0.0200410028762014 0.897963567850408 -0.022389193341426 0.775409898901525 ATGGAGCCCGGCCCCGCCGCGTCCCCTGGACCTTCCCGCTCCTTCAAAGAGGAGCTGCTGTGCGCCGTCTGCTATGACCCCTTCCGCGATGCCGTGACTCTGCGCTGCGGCCACAACTTCTGTCGCGGGTGCGTGACCCGCTCCTGGGAAGTTCAGGTGGCGCCCACCTGCCCGGTGTGCAAGGACCGCGCGGCCCCCGCCGACCTGCGCACCAACCACACCCTCAACAACCTGGTGGAGAAGCTGCTGCGCGAGGAGGCCGAGGGCGCGCGTTGGACCGGCCACCGCTCCCCGCGCCTCTGCCGCCTGCACCGCGGCCAGTTCAACTTTTTCTGCCTCGACGACAAGGAACTGCTGTGCTGCTCTTGCCAGGCCGATCCCCGGCACCAGGGACACCGCGTGCAGCCGGTGAAGGACACCGCCCACGACTTTCGGGCCAAGTGCAGGAACATGGAGCATGCGCTGCGGGAGAAAGCCAAGGCCTTCTGGGCAATGCAGCGCTCCTACGAGGCCATCGCCAAGCACAATCAGGTGGAGGCAGCCTGGCTGGAAGCACGGATCCAGCAGGAATTTGACAAGCTCCGCGAGTTCCTGCGCGTGGAGGAGCAGGCCATCCTGGATGCCATGGCCAATGAGGCAAGGCAGAAGCAGCACCTGGCGGAGGAGAAGATGAAGCGGCTGACGGAGGACACGGAGGCCTTGGCCCATGAGATTGAGCGGCTGCAGATGGAGATGAAGGAGGATGACGTTTCCTTTCTCATGAAACACAAGAGCCGAAAACGCCGCCTCTTCTGCACGATGGAGCCGGAGCCCATCCAGCCCGGCATGCTCATCGACGTCTGCAAATACCTGGACTCCCTGAAGTACCGCGTCTGGAGGAAGATGGTTATGTGTGTTGAATCTGTGCCTTTCAGCCTTGATCCCAACACCGCGGCTGGCTGGCTCTCTGTGTCCGACGACCTCACCAGCGTCACCAACCACGGCTACCGGGTGCAGGTGGAGAACCCGGAGCGCTTCTCGTCGGCGCCCTGCCTGCTGGGCTCCTGCATCCTGTCGCAGGGCTCACACGCCTGGGAGGTGGACCTGGGGGCACTGGCCAGCTGGCGCGTAGGGGTGGTGCGGACGCGACAGGATGCGGGCACCGAGGGCCACGCGCACAGCTGCTACCATGACACGCGCTCGGGCTTCTGGTATGTGGGCCGCACGCAGGGCGTGGACGGCGACCACTGCGTGACCTCGGATCCAGCCGCGTCGCCCCTGGTCCCCGCCATCCCGCGCCGCCTGCGCGTGGAGCTGGAGTGCGAGGAGGGCGAGCTGTCCTTCTATGACGCTGAGCGCCGCTGCCACCTGTACACCTTCCACGCCCGCTTTGGGGAGGTGCGGCCTTACTTCTACCTGGGCGGCTCACGGGGTGACGGGTCCCCAGAACCACTGCGCATTTGCCCGCTGCGCATCACCATCAAGGAGGAGCTGGACAGCTGAGGACCCTTCGGCCCGCTGGACTCCGCGTGCATCCAGCAATCGGTCCCATTTCCTTCCTGTCCCTTCCCAAAGCCACGCTTGCCTTGGTACCTCTCTACCGCCTGCCTTCTTACCAGGATCTTCCCGCTGACCTCCCCTGTCATTTTCTGTGGCTCCAGGCCACGGGCCTTTCCCCCCCTTTTTTTTGGTCCCTTTTCTCCCCCACTTTGAAAGTCAGCCAGGAGATACCTCCTGGGTCAGGCTTTTTCCAAAGTTGTGGCATCCTCTGGATGTGAATTTCCTGATCCAGATTCTAAGATTTCTGGGGATAATGTTTGTTTCTAGAGTGGGTCTGTTTAAAAAATGTAGGTTTTTGTTTTAAAATCATTTTTCAAGTGTTGTGAGGCCAGCAGATGGGAGGGGACTGCTGTTGAAAAGAGTTTGTTACTTACAGTTCCTAGGAGAAGGGGTGCTGCGGTGGGGGTGCTGTGGGGAGGGGGGCACCAGGGGAAGCACCAGAGTCCTTAGGAGGTAAGGGGCGTGCTTTTCATGGAAAGGAACAGAGGAGGCAGGGTACTGGGTGAGTGGGTTTATGATCGGCAAGTCTGAGTACTTTTCACAGGTTCTGGGGCATAGTGGCTGCCCCTAGTTGTCCTGAAACCTGGATGTGGGTTGATTGTGCATGTGTGCATGCTCAGTCATGTCCTACTCTTTGTGACTCTATGGGCTGTACCCACCAGACTCCTCTGTCCGTGCAATTTTTCATTCAAGAATCCTGGAGTGGGTTACCATTTTCTATTCCATGAAATCTTCCTGATGCAGGGATTGAACCCTCATCTCCTGCATTGACAGGCGGCTTCTTTACCGCTGAGCCACCTGGGAAGCCTGTGGATTGATTAGCACAGGGGATTATTGGCTTGGAGTGGATCCCGGTGAGAGCCTGGCACAGGAGGTGGTTGGGGTACTGTTTTGCATGTAAAAGATGGACTGCATTCAAAAGGCACACTCACAGGGGGGTTGTTTGCTGTCTGCAGGAACTTGCTGGCCAGGGAGGCTCCAGGAGCCAGAGTGGCCCCAGGAGCCAGAGTGGCAGGAATTCAGAAAAGAAGAAAATATGGTTATTCTAGCACCATTGCCATGGCTTTGGGCAGGACCCATGCCCTGGCTTGTCTGTCACTTTATACTGGTATTTAAGGCTGCTCTGTGGGCCTTGGTGGAGCCCTTCAGGGTGGGGGTGGGGACAAGGCTGCCCATCCAATCGGCTCTAACTTATAGATTAAGACTTCTTGCACAATTTCCTCTTGAACAGAGTTTCCAGAGCACTTTAAAACACAATTTAAATAGCATGATTTTCACTTTCCTCATCTGCAAATGAGATGGTAGATCTGGAAGGTGATGGATGCGCTGTAGTTGTGTGGAGGACCTTTCTCTGGTTCCTCTCACAGAGGTACAGAAGGAGGAGAAGAGAGCCCCTTTGTGTTAGGAGGGAAGGGAGGCGATTCTGTCCAGGGAGGGGGGTATTGGTATCAGGAATGAGGAGGGGCTCCGGGGCTCTGGTCTCTGCTGACCTCAGCCTGCTCATTCTTGTTCTGCTGCCTTTTACATCTTCATCCTGATTTCTTCTCCCTCTGCCTTGCCTCCAGACTCCTGCCTTACCTTTTCGTCTTCATGTGCCTGTGGAGGATTTTTAATTGTCACCTCCTCACTTGTGTCCTGGGACAGGGAATGTCTCCCTGTAGGAGCAATGTTTTAATGGAGGTGTTTTTACCGAAGACTCACAAACTTTCTCCTGCTTGTGTCTCCTGGTTCACCGAAATGGACATTTTAAACAGAAATGATGATTCAAAACTAAAAATTGGTTATAAGTGTGATGTGTCCATCATTGGTGGCCAGGGGAGGGAGGTGGTAGGATATACCACTGAGTCAAGGGGACCAGATGCAAAAGAGGGGTGAGGATGTTGGCAAAGGGGTGGATGTGAGCTGAATGGCCCCTCTAAAGATGCTCAGATTCAGCAAAGCTCAAGGCACTTTGGACCCAACACATCTGAGTCCAGTGTGCACTTTGTACCATAAAGTATTATCTGGCCTGTTAAATGCAAATCACTACCTAATAAATCTTGACCTGAAACTATTTTGTTAGTTGTTGTAAACTTTTAAAAATGTTTTTTCCTTTCCATCTTAGGTGTTGGAAGGGCTTTGTTTTATTTTTACAGGATATTGTGGATTGCCTAGGCCCCTTTTTACCAAAATAAAGTGTTTGAGCCAAAGTATACCTTTTTTTTTTTTTGACATTTTCCTTTCAGTGTTCTCATAAGCAAAAAGTTTCATTCACCTTGTAGCATGTATTGAATGTTTTTGTTTTTATCATTGGGTAACCTGTTATATGGATATATACTGCATTTTACTTACCAGCTCTTTAGTTGGTGAAAACATTTTGATTGTTTTCACTTTTTGCCATTGTGAATAATGCTGCTATAAATATTTGTGTGC EMBV3_14284 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02290 CCTGAGTTGACCTCATTGTCAGTTCCCGGATACAGAGTCTGGCACTTCCTTCCAGTTCTT Gene GeneID:508888|PLCB2:XM_002690788:220_cdna Constitutive 0 NULL GeneID:508888 10 GENE PLCB2 NULL phospholipase C, beta 2 EMBV3_23958 AACTACTGTTTGTTTTGGGGGCTGGGGGAAGTGAGCCTGTTTGGATGATGGATGCCATTC Gene GeneID:100336629|LOC100336629:XR_083853:66_cdna Constitutive 0 NULL GeneID:100336629 15 PSEUDO LOC100336629 NULL Yes-associated protein 1, 65kDa-like EMBV3_25868 ATGCAGAGCGGAATTGGAGGTTTTGTGCTGGGGCTGATCTTCCTTGGTGTGGGCCTTTTT Gene GeneID:282498|BOLA-DYB:NM_001012679:62_cdna Constitutive 0 NULL GeneID:282498 23 GENE BOLA-DYB Bola-DIB DYB major histocompatibility complex, class II, DY beta EMBV3_42854 CATGGGCCCTGTAAATACCTGGATAGGCCTCATGGATCAAAATGGGCCCTGGAAATGGGT Gene GeneID:509121|ASGR1:NM_001037590:54_cdna Constitutive 0 NULL GeneID:509121 19 GENE ASGR1 MGC133691 asialoglycoprotein receptor 1 EMBV3_39066 GCCATATGTCAAACCAATGAAGGCATCTGATAAAGTTCGGCAGGGAGGCTTTGGCAGTAC Gene GeneID:100296151|LOC100296151:XM_002693938:59_cdna Constitutive 0 NULL GeneID:100296151 16 GENE LOC100296151 NULL hypothetical protein LOC100296151 EMBV3_09138 TAATTAATTCCAAGTAAAAGTACTATGTACCCATTAAAATATAGCATGTTTGAAGAAATA Gene GeneID:100300550|LOC100300550:XM_002699981:62_cdna Constitutive 1 NULL GeneID:100300550 X GENE LOC100300550 NULL similar to cytochrome c oxidase subunit VIIb EMBV3_22244 AGTCTGGTTTGGACTTCAGTGCTTGGCTGTCCTGGAATCCACTGTAGCACGGCCCACAGT Gene GeneID:508470|LOC508470:XR_082718:258_cdna Constitutive 0 NULL GeneID:508470 19 GENE LOC508470 NULL hypothetical LOC508470 EMBV3_40038 GCAGGGCGTGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGG Gene GeneID:615850|PTPN5:NM_001102293:45_cdna Constitutive 0 NULL GeneID:615850 29 GENE PTPN5 MGC159839 protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) EMBV3_42631 AGATGCTGGCAGAGAGAGAGGAGGCTCTGGCAAGGGGCCGGGTCTGGGCCTGAGGAGGAG Variant GeneID:615252|NOL12:NM_001046557:97_cdna 272^414 2 EMBV3_01388 GeneID:615252 5 GENE NOL12 MGC137139 nucleolar protein 12 EMBV3_40918 GGAAAACAGAACACTTATGCTGTGTAGTAGAGATAACCTTGGAACTGCATTTTTCCAAGC Gene GeneID:282141|ANGPT2:NM_001098855:5_cdna Constitutive 0 NULL GeneID:282141 27 GENE ANGPT2 MGC159730 angiopoietin 2 EMBV3_06666 TTGCTTCACCAGTGCCCGCTTCACCTACACCCTAACCACAGGACTCTCCACTTCTCTTAA Gene BVT0101_003294 + 1 EMBV3_28016 GK000005.2:1628119-1907804 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190735 TCONS_00190737 1 XLOC_116731 NonCoding TCONS_00190735 XLOC_116731 NonCoding NonCoding - 5:1683096-1684425 - TSS143080 523 2 TCONS_00190735_2 54 0.72848948374761 2 0.607680722891566 0 0 0 0 0 0 0 0 0 9.69021445490195e-10 4.32489236865684e-10 0 0 0 0 1.61153827554251e-09 0.00514120516145956 6.51305544637966e-10 0 0 0 0 1.75411032546478e-05 0.00012219441567562 0 0 0 0 4.34340610067443e-10 1.26413590907355e-09 XR_229904.1 LOC101904089 PREDICTED: Bos taurus uncharacterized LOC101904089 (LOC101904089), 1e-16 91.5 71.19 0.336520076481836 0 noncoding CTGGTCTTCGCTTGCATGCAGCTGAGGATGAAGGGAAAAGCCACTCAAGATGGCTCTTCTCTTGCTGTCTGTACATGCCTTGCTTCACCAGTGCCCGCTTCACCTACACCCTAACCACAGGACTCTCCAATTCTCTTAATCACAGGGCTTAGTCAGTAACTGCCTGCATGCTTGCCCCTGGCCCTGGGCGCGGGTGTCCCTGGTCACTGATGAGCCTTCCTTTCCCCCTGAGAAGACTGTAGCTGAGCCCCGCCTGCAGTCTGCCGTACGCAGTGGGGTGTCACTCGGTGAATTTGCTCCTGACTTGTAAGATGCCCTGTCTAATAAACCATCCATGTCTCTGTCACAGTCTCTGGGCTCTGTTTTCAGTGTCACGTCTGAGCAAGTACAAATGCAGGCCTGTAGGGTGCAGCCTAACAGTGCTTGGTGGAAATTTCCTGTGAACTTATTTTATTCTAGTGACATTTATAAGACACTGATTCATTATGTCTCTTCATAGATTAAGAGAGGGTCCCTAACCCAC TCONS_00190733 TCONS_00190734 s 3' 54253 TCONS_00190733 TCONS_00190734 s 3' 54253 EMBV3_06080 AGGATGTGACTGCCGTCTGTGATATGCCCAACATCATCTGTAAGAATGGCCGGCACAACT Gene GeneID:282341|RNASE6:NM_174594:22_cdna Constitutive 0 NULL GeneID:282341 10 GENE RNASE6 MGC133715 ribonuclease, RNase A family, k6 EMBV3_41169 AATACTGCTTGGTCCACGCCCAAAACTTTTATCGTCAATTTGCTCCTTCACAGCTCCCTC Gene BVV0101_029311 + 0 NULL GK000016.2:25064944-25716670 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04838 CCTGTGGCTTCATAATCTCACTGGCCACCACCTCCATGATATTTCACCTGCCATTCCACT Gene GeneID:508806|LOC508806:XM_002685946:124_cdna Constitutive 0 NULL GeneID:508806 3 GENE LOC508806 NULL similar to putative olfactory receptor 10K2 EMBV3_16039 GGTTGCCGTGTACGCTGAGAGCGCCACTTACTGTCTTGTGAAGAATGCTGTGAAGACGTT Gene GeneID:497202|GPAM:NM_001012282:18_cdna UTR3_Alt 2 NULL GeneID:497202 26 GENE GPAM NULL glycerol-3-phosphate acyltransferase, mitochondrial EMBV3_35875 GCCGAGCCGCTGGACAAAGTGCTGCAGCAGAACCTGGTGCTCCCCGACACCTTCTTCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04010 AAGAAGGTGTATCTCAAAGTGCGGCCAGATGAGATTATGCGTGACTACATCCAGAAGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19119 CCACGAGCCGGAGCGGCAGGAGTCGGCCATCCACATGCACTTTGGGGAGGCCTGGCTTGG Variant GeneID:534297|METRNL:XM_002696106:183_cdna 768^914 5 EMBV3_24411 GeneID:534297 19 GENE METRNL NULL meteorin, glial cell differentiation regulator-like EMBV3_36502 GATCATTACTAGGCAATATTGTGATGCTAACAAGCAACCTAATTCTACCTTTGTGCAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08518 GGCCAGGTGGTGGGCGTGTGAAAATTGAAAGTGTGAAGCTAGATTTCAAAGAAAAGGCCC Gene GeneID:281294|MAP2:XM_002685550:158_cdna UTR3_Alt 2 NULL GeneID:281294 2 GENE MAP2 NULL microtubule-associated protein 2 EMBV3_00308 CTGTCGCCTCTAATATGGACACTAGTTTGAGGGATTTTGGGGTTTTTTTTTAATGAATAG Gene GeneID:510383|TMEM14A:NM_001034379:255_cdna Constitutive 0 NULL GeneID:510383 23 GENE TMEM14A MGC127803 transmembrane protein 14A EMBV3_29762 GTGCTTCTAGAGCTGCACACCTGTCTCTTCCATGTGTTTTCCTCACAGGTTCATATCATC Gene GeneID:493992|ST6GAL2:NM_001008668:41_cdna Constitutive 0 NULL GeneID:493992 11 GENE ST6GAL2 SIAT2 ST6GalII ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 EMBV3_27833 AGGAAGCACTTCATCAGTTCCGCTCAGGAAAAAGCCCAATTCTAGTGGCTACTGCTGTGG Gene GeneID:783057|DDX3Y:XM_002700447:2_cdna Constitutive 0 NULL GeneID:783057 X GENE DDX3Y DBY DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked EMBV3_20483 GGGCTTGGAGGTTAGTTACAAAAAATTTGGGGAGATGAGGATTCAAAGAAAGACCCCCAG Gene GeneID:281738|CYLC2:NM_174303:2_cdna Constitutive 0 NULL GeneID:281738 8 GENE CYLC2 NULL cylicin, basic protein of sperm head cytoskeleton 2 EMBV3_24638 AAGAGTAAGGACCGAACAAGAAGTGCTGAGGAAATGGGAAATGGACACGTGGACAGAGGG Gene BVV0102_125863 + 0 NULL GK000005.2:108207804-108209677 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193239 TCONS_00193242 TCONS_00193245 TCONS_00193254 TCONS_00193243 TCONS_00193244 TCONS_00193246 TCONS_00193252 TCONS_00193241 TCONS_00193240 TCONS_00193249 TCONS_00193255 TCONS_00193248 TCONS_00193253 TCONS_00193247 TCONS_00193250 TCONS_00193251 1 XLOC_117426 Coding TCONS_00193246 XLOC_117426 Coding Coding WNK1 5:108079509-108209093 = TSS144468 9505 1 TCONS_00193246_8 2376 28 0.926865406727734 0.002534718487208 0.000790299269199027 0.00232689611582197 0.000631511599496703 0.00126503840967407 0.000586852968280336 0.000250141202889641 0.000517562333098103 4.61077835903008e-05 2.87500554493068e-06 5.9472136918487e-06 0.000210716655357577 2.42264551665979e-35 3.41291722708995e-05 9.83020618890117e-09 0.00130136885763213 0.000144595355373511 2.58708397605913e-26 2.53904097056449e-07 0.00357520490400701 0.00115282293551886 0.000242853390152195 6.47762494967021e-08 3.01501311216794e-17 0.0029107275234532 0.00150383067915437 0.00106204273137972 1.24862639828254e-11 2.59202840784236e-26 6.77429140035149e-06 XM_002687906.3 WNK1 PREDICTED: Bos taurus WNK lysine deficient protein kinase 1 (WNK1), 0.0 1.714e+04 100.00 0.999579168858496 NM_018979.3 WNK1 Homo sapiens WNK lysine deficient protein kinase 1 (WNK1), 0.0 8217 78.94 0.999894792214624 TCONS_00193246_8 sp|Q9H4A3|WNK1_HUMAN WNK1_HUMAN Serine/threonine-protein kinase WNK1; 0.0 3536 81.69 0.999579124579125 3 coding 1 1 1 1 0.226567851886326 0.48126121463241 -0.0560803486563796 0.501703300862085 ATGTCTGGCGGCGCCGCCGACCAGCAGAGCAGCGCGCAGGGCTCGCTGTTCCTCTCGCCCCCGGCGCCTGCCCCCAAGAATGGCTCCAGCTCGGACTCCTCGGTGGGGGAGAAACTGGGCGCCGCAGCGGCCGACGCCGCAGCCGGCCGGACGGAGGAGTACCGGCGTCGCCGCCATACCATGGACAAGGACAGCCGGGGGGCGGCCGCGACCACCACCACAGAGCACCGCTTCTTCCGCCGCAGCGTCATCTGCGACTCCAACGCTACGGCCCTGGAGCTGCCCGGCCTCCCTCTGCCGCTGCCTCAGCCCGGCGCGGCTGCCGTGGTCCCGCAGCGGAGCCCCCCGGAACCCCCGCGCGAGGAGACCCTGATCCCCGCCGCTGCCGCCCAGGTGGCCCAGCAGCCGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCCTGAGGAGCCGGTCGCCGCGAGCCCGGCCACCTCTTCGGCCCCGAGCAGCGCGGGCAGAGACCGCCAGGCTGTCCAGCCGGGCCCCGCGGGGAGCCGAGAGGAGCCTCCGACGTCGAGAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCCCCAGGAGGAACGGAGCCAGCAGCAGGATGACATCGAGGAGTTGGAGACCAAGGCCGTGGGCATGTCCAACGACGGCCGCTTTCTCAAGTTTGACATCGAGATTGGCAGGGGCTCCTTTAAGACGGTCTACAAGGGTTTGGACACCGAGACCACCGTGGAGGTCGCCTGGTGTGAGCTGCAGGATCGAAAGTTAACAAAGTCTGAGAGGCAGCGATTTAAAGAAGAGGCTGAAATGTTAAAGGGTCTTCAGCATCCCAATATTGTTCGATTCTATGATTCCTGGGAATCCACAGTAAAGGGAAAGAAGTGCATTGTGTTGGTGACTGAACTGATGACATCTGGAACTCTTAAAACGTACCTGAAAAGGTTTAAGGTGATGAAGATCAAAGTTTTGAGAAGCTGGTGCCGTCAGATTCTTAAAGGACTTCAGTTTCTTCATACTAGAACTCCACCTATTATTCACCGGGATCTTAAGTGTGACAACATCTTTATCACTGGCCCCACAGGCTCAGTCAAGATTGGAGACCTAGGTCTGGCCACCCTGAAGCGGGCTTCTTTTGCCAAGAGTGTGATAGGTACCCCAGAGTTCATGGCCCCTGAGATGTATGAAGAGAAGTACGATGAATCCGTTGATGTTTATGCTTTTGGGATGTGCATGCTCGAGATGGCCACGTCTGAATACCCGTACTCAGAGTGTCAGAACGCTGCACAGATCTACCGTCGTGTGACCAGCGGGGTGAAGCCAGCCAGTTTTGACAAAGTAGCAATTCCTGAAGTGAAGGAAATTATTGAAGGATGCATACGGCAAAACAAAGATGAAAGATACTCTATCAAAGACCTTTTGAACCATGCCTTCTTCCAGGAGGAAACAGGGGTACGGGTAGAATTAGCAGAAGAAGATGATGGAGAAAAGATAGCCATTAAATTATGGCTACGTATTGAAGATATTAAGAAACTAAAGGGGAAATACAAAGACAATGAAGCTATCGAGTTTTCCTTTGACTTGGAGAAAGATGTGCCAGAAGACGTTGCTCAAGAAATGGTAGATTCTGGGTATGTCTGTGAAGGTGATCACAAGACCATGGCAAAAGCCATCAAAGATAGAGTGTCGTTAATTAAGAGAAAACGAGAACAGCGTCAATTAGTGCGGGAGGAGCAAGAAAAAAGAAAGCAGGAGGAGAGCAGCTTCAAGCAGCAGGTGGAGCAGCAGCCCAGCACTGCCCAGGCCGGAGTCCAGCAGCCCCCTGCCACCAGCACTGGTGGACCCGCTGCCTCTGCTGCGTCTGCGTCCGTCTCCACGCAGGTAGAGCCAGAAGAGCCTGAGGCCGACCAGCACCAGCAGCTGCAGTACCAGCAGCCTGGTGTGTCTGTGATATCTGACGGGACGGTTGACAGTGGTCAGGGGTCTTCTGTCTTCACGGAATCTCGAGTCAGCAGCCAACAGACAGTTTCGTACGGGTCCCAGCATGAGCAGGCACCTTCCACTGGCGCCCTCCCAGGGCACACAGCATCTGTTGTCCAAACGCAGGCTCAGCCCCATGCGGTATATCCACCCTCAAGTTTGGCACAGGGGCAGAGCCAGGGTCAGCCATCTTCAAGTAGTTTAACAGGGGTTCCATCCTCCCAACCCATGCAGCATTCTCAGCAGCAGCAAGGAGTGCAGCCAACAGCCCCCTCTCAGCAGGCGGTGCAGTATCCGCTCCCTCAGACATCGGCCCCCAGCGAGGCCACGATTGCACAGCCTGTGAGTCAGCCTCCACCTCCACAGGCCTTGCCACACGTGTCCGCGGGAAAACAGCTTCCAGTTTCCCAGCCAGTACCAACTCTCCAAGGCGAACCTCAGATCCCAGTTGCAACACAGCCCTCAGTCGTTCCCGTCCATGCTGGTGCTCACTTCCTTCCTGTGGGACAGCCACTCCCACCCTCTTTACTGCCCCAGTACCCCGTCTCTCAGCTGCCCCCCATCTCTCAGCTCCCCTCTGCTCCTCCTCACGTGTCTGTGGCTCAGCCAGGCTTCCCACCCCTGCCGGTCACGATGGCAGCTGGCGTTAGTCAGCCTCTGCTCACCTTGGCTTCATCTGCTGCGGCGGCGGCCGTCCCCGGGGCACCCACTGTGGTCCCTAGTCAGCTTCCTGCCCTCCTGCAGCCTGTGACCCAGCTGCCGAGTCAGGCTCACCCGCAGCTCCTGCAGCCAGCAGTTCAGTCCATGGGGATCCCCGCCAGCCTTGGACAGACTGCCGAGGTGCCACTTCCCCCTGGAGATATTCTCTACCAGGGCTTCCCACCTCGACTGCCATCGCAGTACCCAGGAGACTCAAACATTGCCCCCTCCTCCAGCGCAGCTTCTGTGTGCCTGCCTTCTGCAGTCCTGTCCCCTCCCATGCCGACAGAGGCGCTGGCTGCCCCGGGTTACTTTCCTGCAATGGTGCAGCCCTATGTGGAATCCAGTCTCTTGGTTCCTGTGGGCAGTGTAGGAGGACAGGTCCAGGTGTCCCAGCCGGCAGTGAGCTTAGCACAAGCCCCCACCACATCCTCCCAGCAAGCAGCTCTGGAGAGCACTCAGGTCGTCTCTCAGGTGGCTCCTCCAGAGCCAGCTCCCGGGGCTCAGCCACAGCCTGCCCAGCCAGCCGCGGTGGTCTCTTCTATAGACAGCGCACATTCAGATGTGGCTTCAGGCCTGAGTGATGGCAACGAGAATGTCCCCTCATCCAGCGGGAGGCACGAGGGCAGGACCACGAAGCGGCTGCATCGGAAGTCTATAAGGAGCCGCTCTCGTCACGAGAAGCCTTCCCGCCCCAAACTGAGAATTCTCAATGTTTCAAATAAGGGAGATCGGGTGGTAGAATGTCAGTTAGAGACTCACAATCGGAAGATGGTTACATTCAAATTTGATTTAGATGGTGACAACCCTGAGGAGATAGCCACAATTATGGTGAACAATGACTTTATTCTGGCACTGGAGAGAGATGCGTTTGTGGAGCAAGTGCGGGAGATCATTGAGAAAGCTGACGAGATGCTCAGTGAGGATGTCAGCGTGGAGCCAGAGGGTGACCAGAGCTTGGAGAGTCTCCATGGCAAGGATGACTATGGCTTCTCAGGCACCCAGAAATTGGAAGGAGAGTTCAAACAACCAATTCCTGCATCTTCCTTGCCACAACAGATAGGCATTCCTGCCAGTTCTTTAACTCAAGTTGTTCATTCTGCTGGAAGACGGTTTATAGTAAGTCCTGTGCCAGAAAGTCGATTACGAGAATCAAAACTTTTCACTGAAATTTCAGATACGGTTGCTGCTTCCACATCTGCTGGCCCTGGAATGAACTTGTCTCACTCTGCCTCATCCCTTAGTCTGCAGCAGGCCTTTTCTGAACTTAGACATGCTCGGATGGCAGAAGGGCCGAGTACGGCCCCTCCCCACTTTGGTCAGACAGGCCCCGTGTTTCCAGCAGTGCCTCCCACCCTGAGCAGTGCCCCTGGAGCCCCAGCCGCAGCAGCCGCAGCCTCGGTGTCAGCCCCTGCCCCAAGCCACCCTCTTAGTGACGTGACCACATCGGTCATTCAGACTGAGGTGACAGTGGCCCCTGGAACAGGTGTCATGCCTCCCAGTGGTCTCCCTGTACCCCCTGTGTCTGAGTCCCTGGCACCTTCCAGCGTGGCCCCCAGCGTCACCATCCCTGCAGTTCTCTCGGCACTACCAGCGCCCCAGGCGGCACAGGCTCCCACCCCTGGCAGCGGGGCCTCCAGTGCAGGCACTTTCCCCTCTGCACCCGCATCCCTGACACCAGCCTCTGCTGTGGGCAGCGCTGTTGCCTCTGCTGCTCAGCTTCCGCCTGTGCCGTCTCAGCCCGCGGTAGGCAGCTCGACCGGGGTGGCCACGCTGACAGCCGTGCCCGCTGCCGCTCTGGGCCCTAGCCTCACGGCACTGCCGTCCCTTGCTCTCAGCAGCAGTACCTCTGCCCCAGCTCTGGCAGAGACAGTGCTGGTCAGTGCCCACGCACTGGATAAGACGGCCCATAGTAGCACCACTGGCCTGGCTCTGTCCCTTCCTGCCACCTCGTCCTCTCCCGCCCCTGGAGCAGGAGTGTCCAGTGCTGTTTCTCAGCCTACTGCTGCGGCTCACCCTTTGGTCCTCCCATCAGTCGTAACCTCTACTCCCGTACTCTCCCAGGCAGGACCCATGTCAGCACCTCTACTGCCCCAGGTACCCGGTATTCCACCCCTGGTACAACCTGTTGTCAGCGTGCCTGCTGTGCAACAGACCCTGGTTCATAGTCAGCCTCAGCCCGCTCCACTCCCCAACCAGCCCCACACTCACTGTCCCGAGATAGACGCCGACACTCAACCCAAAGCTCCCGGGATCGACGACATCAAGACTTTGGAGGAAAAGCTGCGATCTCTCTTTAGTGAGCACAGTTCTTCTGGAGCCCAACACGCCCCCGTCTCTCTGGAGACCTCGCTCACTGTAGAGACCGCTGTCACAGCAGGCCTCCCAACCACTGCTGTTGCACCAAGCAAGCCTCTGACTTCCACTGCCAGTACTTGCTTGCCACCAACCAGTCTGCCCTTAGGAGCAGCTGGCTTGTCAGTTATACCAATGGTCACTCCTGGTCAAGTTTCCACCCCAGTCAGCTCTGCGCCAGGAGTGAAACTTGAAACTGCTCCAGCAAAGCCACCTTTAACTAAGCCTCCAGTGCTGCCCATGGGCACTGAACTTCCAGCTGGTACTCCACCCAGCGAGCAGCTGCCACCTTTTCCAGGACCTTCACTAACTCAGCCCCCGCAGCCCCTGGGAGACCTGGACGCTCAGCTGAGAAGAACCCTCAGTCCCGAGAGTGGCATGCTGACGTCTGCCGTTGGACCCGTGTCTGTGGTGGCTCCAACAGCAGTTGTGGAGACCGAAGCCCAACTTCCAAAGGATGTCTCTCAAGTCACAGAAGCTCCTGTCCTTGCGCCCACTTCCACAGCTGGTGTTCTGAAGATGGGGCGATTTCAGGTCTCAGTTGCAATGGATGACCCCCAGAAGGAGGGTAAAAGTAAGTCGGAGGATGCCAAGTCTGTCCACTTCGCATCCAGCACGTCAGAGTCCTCGGTGCTGTCAAGCAGCAGCCCCGAGAGCACCGTGGTGAAAGCAGAGCCCAACGGGCTGGCCGTCCGGGGCGCCTCTGCAGACATGCCTGACAGCGCCCACCAGCCACCTGCCTCAGAAGCTGGGCAGCCTAGCAAGGTGGGCCGTTTTCAGGTGACCACCACAGCGAGCAGAGTGGGTCGCTTCTCTGTGTCCAGAACTGAAGACAAGATGGCTGAGGTGAAGGGAGAGGAGCCAGTGGTCTCTCCTTTCATGGACTCAGAACACGACATTCCTCCCACCGTGACGCCAAAGAAAGAGAAACCCGAACTGTCTGAGCCTTCGCATCTGAACGGGCCGTCTTCCGACCTGGAGGCTGCCTTCCTCAGCCGGGACGTGGATGCTGGCTCAGGGAGCCCTCACTCCCCTCCGCAGCTGAGCTCCAAGAGCCTTCCTGCCCAGAGCCTCAGTCAGAGCCTCAGCAATTCCTTCAACTCTTCCTACATGAGCAGCGACAATGAGTCAGACATTGAAGACGAGGACTTAAAGTTAGAGCTTCGCCGACTACGGGAAAAACATCTTAAAGAGATTCAGGACCTGCAGAGTCGCCAGAAGCACGAAATTGAGTCTTTATACACCAAACTGGGCAAGGTTCCTCCTGCTGTCATCATTCCCCCAGCAGCCCCCCTTGCAGGGAGAAGGAGGCGACCCACCAAAAGCAAAGGGAGCAAGTCCAGTCGCAGCAGCTCTTTGGGGAATAAAAGCCCTGGACCAGGTACCCTGTCTGGCCAGAGTGCAGCTTCAGTCTTGCACCCTCAGCAGACCCTCCCCGCTCCTGGCAGCGTCCCGGAGACAGGGCCCAACCAGCTGTTACAGCCTGTGAAGCCATCTCCTTCCAGTGACAACCTGTACTCGGCCTTTACCAGCGATGGTGCCATTTCAGTACCAAGCCTTTCTGCGCCAGGTCAAGGGACCAGCAGCACCAACGCCGTTGGGGGAGCCGTGAGCAGCCAGGCCGCCCCGGCTCCACCTCCTGCCGTGACGTCCAGCAGGAAGGGCATGTTCACGGACGACCTGCACAAGCTGGTGGACAACTGGGCCCGGGACGCCATGAGTCTCTCAGGCAGGCGGGGAAGCAAAGGACACGTGAGCTATGAGGGCCCTGGCATGGCAAGGAAGTTCTCTGCGCCCGGTCAGCTGTGCGTCTCCATGACCTCAAACCTGGGCGGCTCTGCCCCCGGCTCTGCAGCGTCAGCTACCTCTCTAGGGCACTTCCCCAAGTCCATGTGCCCCCCTCAGCAGTACGGTTTCCCTACCCCCCCGTTTGGCACGCAGTGGAGCGGGACGGGTGGCCCGGCACCCCAGCCGCTTAGCCAGTTCCAGCCTGTGGGAACAGCCTCCTTACAGAATTTCAACATCAGCAACTTGCAGAAATCCATCAGCAACCCCCCAGGTTCCAACCTGCGGACCACGTAGACCCGAGGCGATCCTGGGGCAGGTTTGGGGACAGGAGATGGAATGTGGGGGGTCGGGGGCATAGCCTATATGCTGACTACTAGTGCTGCATTTAACTGGTCATTTCTTGCCAGAAAGGAATGTTTTAATCCCGCTTAGAGCCCTTGGAGTGGAGCCCCCCGCCCTCACCATCGCCTGAGTGGGAGGAGGGGAGGGCAGCTGTCTTGTGTGCGCTTTGTCGTTGCCCAGACCCAGCAGCGAGCCATTGGGAAGTGGGGTTGGTCAGAAGGCTCCTAGAGAGCTCTGGAAAAGCAGAGCCGTCTACATTTTCAGGTGGTGGGGCTCTTCATTTTGGTAGCCACCCCAACCCCTTACTTACTCCCTCAAGAATATAAACCACAAGACAAAAAATTTAAACTATTGGGCTCTCTCCTACCCTGTCGCCCACTGTTTTTCTTTCTCCTGTCTCCCCCTACCCCCGACCCCAATCCAGCCAGTCTTTAGAACCCAGTGCAGACACCAGGGGAGGGATGGAGGTTTCAGCCCTTTCTTACAATAGGTCATTAGTGCTTTAAGCAAATGATATTCGCAGCTTTGACTGCAGCATTAGCAATTAGGAAAAAAATTAAGTTCCCTGCGGACATGTAACTTTGCCATCAGTTTTGATGTGGAAACACTGTGATGTATAAATGTTGTTGGACAACAGTAGTTTAAGAGTAAAATATGAAAGGCTTAAAAAGGCTAGCTCTGTCCTTTACTTACTGAGATTTCACTTTTCTCCTTTGTATTTCCATTGTATTAGATAAATAAATGTGAATGTAAAATTGTATAAATCACTCTACTTGAATACTTCCGTCCTCCCAGTACCGCTTGCTGGATGCTTAGTGCCTTGGACTTCTATCGCTTCTGCCGTTGCATCAACTTCTCGTCAGACCCTGGTCAGCTGGTCAGCGAGGGTGTGTGGAAGGAGAGCGTGGGTCCGTGTGACCCAGCAGTGGACTGTGTTGTAAGGAAACTGGAAGGGTATTTTTTTCAAGTCATTTAGCAGTTTTGTAAGATGAGCAGGGTGAGAAGTTAAGTTGACATCAGTGGTTAAAGCAGAAAACTGTTTCAGGACAAATGAGGAGGGAGGCTGTCACCAAGTCGGGCAGTTACCAGGCTGAGCGTGGCGTGCGATTGGTGCCGAGAGACTAGAGGCTGCAGAACAGATGTGTTTTGAAGACGTGGTGCTTGGCCAGCGGCTGCCCTAAGCCTTACTTACCTGCGCTGGGCTTGAACTCAGAAGATTGAGAAGAAATGGCTGAAGAGAAAGGAAGCGGGTAGGGGCTGGTTTTTAAGTTGGGAAATGTGATAGTGAAACGTCTCAGATGCAGAAAGTTGCTCTAAGAAAAATTGTTTGCCTTGCCTTTCCTCTTGGTGCAAATGTACCGTGTATTTCTCAACGTGGGGTCCTGCAGTTGTGGCAAGTGGCCCCACATCTGAAATAAGCACCGTAGGAACGGCTGCTTGTTCCTCCTCACTTCTGTATAATGTCCAGAGGGTTGCAGGGTCATAATCTCTCGGCTACCTTTGTTTCTAGAGTGACAATGGATATTCTCATATAAAGACTCCCCTCAAGTAATAACTGCAACCAGCCAGTATTATTTAGTGCTATGCCTGGTTGTGATGGGCAGTTCTCTTTATTTTCAGAAACTTCAGGAAATATCCTCCCATTGCCTATTTTGGGGATCTCTGTTCTCCCAGAAGATGGGGCAAGAAGCTAGGACTCTTAATCTTGGGGTGCTTCTTCTCTTGACCCTGAGCCACCTCAGTGGCCCAACCCAGGAATCTCCATGACAGGAAGAGCCTGGCTGTCCTGTCCTTCGTTGGCCATTTTCTTTTAAGTTAGCCAAGGCCCCAAAGATGCAAACGAAAGCTGAGGCTTTTAGGAAGGTAAGAGATGAGAAGGGCAGGTGCTCCAAGCTTTGCTTTGAAACTTTTTCTCTGCCTGTAATCCTTGAGAAATGGTAAGAGTAAGGACCGAACAAGAAGTGCTGAGGAAATGGGAAATGGACACGTGGACAGAGGGGACGGACTTTGTACCCAAGGAGGGAGCCAAGTGCAGCACGACTCTGGTCACTTTGGTTTAATGATGTTGAGGTCTCTTCACTCACATGGAAAGTAAGAACTGGTTTTACTTACTGTTGATTTTTTTCCCCTCCTGTGGATGAAATAACTGAAACCTAGAGGAATGAACCAGTGCTACTGAACTGTTTAAATTATTTTCGTGTTAATAGTACACTTTGAGTATCTTTTTCCACATTAAAAAAATCTTTCTGAATTATAAATGTTTTCCTTACGTTATTTAACAATGTACACTGTTTAAACAAAAATAAACTGAATTCAAACCTTGGGG EMBV3_23914 ACCCCACTCCGGCCCCCGGCCAAGCCGCCGGGATGAACACACTTGTTGGCTATGACCTGG Variant GeneID:444878|COX5A:NM_001002891:34_cdna 161^277 3 EMBV3_27953 GeneID:444878 21 GENE COX5A MGC133649 COX5A protein EMBV3_01764 CTGAGATTTGGGGGGCGAGATCGGCCTTTTCGCAAACCCATTAACCTGCCAGTTGTGAAA Gene GeneID:512142|SNRNP35:NM_001075556:138_cdna Constitutive 1 NULL GeneID:512142 17 GENE SNRNP35 MGC140223 U1SNRNPBP small nuclear ribonucleoprotein 35kDa (U11/U12) EMBV3_16425 TGGCGGACGACAGAGACAGGGACAGCACAGAGAGGTCGGAACAATTATCAGGTCATTAGG Variant GeneID:615715|EFCAB2:NM_001101247:110_cdna 62^146 1 EMBV3_14044 GeneID:615715 16 GENE EFCAB2 NULL EF-hand calcium binding domain 2 EMBV3_32922 GAAGTGGGCTGCCTCATCCTCTGGCTTCGCTTGTCCTTGGATCTCTCCCAGTGCCTTTGA Gene BVT0102_346822 + 0 NULL GK000018.2:48661803-48668481 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090601 1 XLOC_055381 NonCoding TCONS_00090601 XLOC_055381 NonCoding NonCoding - 18:48664008-48664710 - TSS67947 702 3 TCONS_00090601_1 70 0.0797720797720798 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000376233276553112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 4e-23 113 98.46 0.0911680911680912 0 noncoding 0 0 0 0 -0.056513518233226 0.65069981525403 0.0536089415105409 0.413173382532876 GTCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGCGACTTAGCAGCAGCAGCAACAGCAGCATTTAATAAGTTCTGACTGAAGTCACAAAAAAAGTCACAAGTTTTCCACCAAATGATGATGTGGAAATTGTGAACCTAACCCCAGGGCCCCCTGGCCAAACCCCTTCATGTAGGAATCACCCCCTGCCACCTGAGAGCCCCTGCCCACTGTCCCTCAACCCTCTGCAAACAGTAGCTATTATGAGTTCAGTCTCCATGGATGGCTTCTGGGAAGTGCCCTCAAAGCTGACAATTAAAGGGAGCCTTTCATTTAAACCTCACTGGCTGGGGACATCCTCTTCATCTCTGAGCCCTGGGTCTAGGGGTTTTCTCAGTGTCGACCGGGAGCAGGCAGGGAGGGGCAAAAGGTCCATTGTTGAAGAGGACTCTCCCTGCCTAGCAGGCCCAGCATGAGAGTCCCGGGCTTGTTCTCCAGGTCAGGCAGGAAGAGATGCCTGGCCCCTACCCAGCCTCGGCCCAGCCCTGCTTTGGAAACGGTCAGCGCTGCCGGGCCTTTGGCCAGGTCATGGCTGTCCGTGGGGAAGTGGGCTGCCTCATCCTCTGGCTTCGCTTGTCCTTGGATCTCTCCCAGTGCCTTTGAGAGAAGATGAAAGAACCTGGGAGCTCCCGTACCTGGAGAAGTCGTGTCTTCTCATC TCONS_00083677 TCONS_00083679 TCONS_00083680 . 3' 2205 TCONS_00083677 TCONS_00083679 TCONS_00083680 . 3' 2906 EMBV3_31171 TGTTGCTGTATCGAAAAGGCCCTCCGTTTTACCATGCAAGTTACTCCGTCATCGTGGAGC Gene GeneID:724061|PPARG-TSEN2:NR_003096:40_cdna Constitutive 0 NULL GeneID:724061 22 GENE PPARG-TSEN2 NULL PPARG-TSEN2 EMBV3_30640 CAGCCATGCCTGGGGAGCTGTGCAAGAAGCCTTTTGTAGCCTTGGCAAGTGGTCAAGAGA Gene GeneID:509795|DUS2L:NM_001075419:171_cdna Constitutive 0 NULL GeneID:509795 18 GENE DUS2L MGC143152 dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae) EMBV3_33122 TGGGTTGTGACTGCTTTTGTCGGAGCCAGTGGTGACGGCTCCCACCTGTTTACAGACCTT Gene GeneID:504217|TNRC6C:XM_002696160:104_cdna Constitutive 2 NULL GeneID:504217 19 GENE TNRC6C NULL trinucleotide repeat containing 6C EMBV3_34792 GCAGGTCTTGCCCTCCTGTTGCTTGGCAGGTTCAAGCCACGCGTTTATGCTTAGGTGAAA Gene BVV0102_153141 + 0 NULL GK000018.2:54497693-54516898 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084087 TCONS_00084091 TCONS_00084094 TCONS_00084093 TCONS_00084095 TCONS_00084088 TCONS_00084089 TCONS_00084096 1 XLOC_051457 Coding TCONS_00084091 XLOC_051457 Coding Coding ARHGAP35 18:54418146-54501520 j TSS63066 9282 1 TCONS_00084091_8 1500 7 0.888752953594089 0.001451699202857 0.000683160219303273 0.00124933241259754 0.000957166646265192 6.00937038553157e-08 0.000426552116689839 1.15362467777421e-05 3.66268185047622e-09 0.000225292243715569 0.000249750240381138 0.00036805062322052 4.20631164211141e-13 5.66658580502242e-05 1.68840886279595e-10 0.000143232092046251 0.00166654495677686 1.52452891020955e-09 0.00162845468960641 4.24841751546923e-06 0.000918358570861021 0.000591212625343872 0.000411509206308721 0.000124110939217355 0.000909744741690858 3.2261761643238e-05 0.00257486513087362 2.96173332878843e-05 0.00071608289339263 3.11913034585245e-05 0.00180406285550695 NM_001192398.1 ARHGAP35 Bos taurus Rho GTPase activating protein 35 (ARHGAP35), mRNA. 0.0 9434 100.00 0.563456151691446 NM_004491.4 ARHGAP35 Homo sapiens Rho GTPase activating protein 35 (ARHGAP35), mRNA. 0.0 6531 86.71 0.578970049558285 TCONS_00084091_8 sp|Q9NRY4|RHG35_HUMAN RHG35_HUMAN Rho GTPase-activating protein 35; 0.0 2973 98.07 0.999333333333333 3 coding 0 0 0 0 -0.0612922637910988 0.830994478059342 -0.134086382341031 0.17590060903509 AAATTGACCTGAATGCCAGGGGATTCAAAGGAGGAAATGTTGGCTATTCGGCGATGAGAAGTGGCAAAAACTGACCTCGTACTGGTATACAAACACTATGAGATCTGACACTTTTGCTTCGTGGGCAGCCAGCCCCCACTGATAATGTGGGGAAGCCTTTGGGTCCACGGGAAAACACTAATCTGATCTTGGAAGTGGCAGATTGTGGCAGGATGTGTCGACGATGATGATGGCAAGAAAGCAAGATGTCCGCATTCCCACCTACAACATCAGCGTGGTGGGATTGTCTGGGACGGAGAAGGAAAAGGGCCAGTGCGGCATTGGGAAGTCCTGTTTGTGCAACCGCTTCGTGCGCCCGAGTGCAGATGAGTTTCATTTGGACCATACCTCTGTCCTTAGCACCAGTGACTTTGGTGGGCGAGTGGTCAATAATGACCACTTTCTCTACTGGGGAGAAGTCGGCCGTTCCCTGGAGGATTGTGTGGAATGTAAAATGCACGTTGTGGAGCAGACCGAATTCATTGATGATCAGACTTTTCAGCCTCATCGGAGCACGACCCTGCAGCCGTATATCAAGAGAGCCGCTGCAACCAAGCTTGCATCAGCTGAAAAACTCATGTACTTTTGCACTGACCAGCTGGGGCTGGAGCAGGACTTTGAGCAGAAGCAAATGCCAGATGGAAAGCTGCTGATTGATGGTTTTCTTCTTGGTATTGATGTTAGCAGGGGCATGAATAGGAACTTTGATGACCAGCTCAAGTTCGTCTCTAATCTCTACAATCAGCTCGCAAAAACAAAAAAGCCCATAGTGGTTGTCCTGACAAAGTGTGATGAGGGTGTTGAGCGGTACATTAGAGATGCGCATACTTTTGCCTTAAGCAAAAAGAACCTCCAGGTTGTGGAAACCTCAGCAAGATCCAATGTAAATGTGGACTTAGCTTTCAGCACCTTAGTGCAACTCATTGACAAGAGTCGGGGAAAGACAAAAATCATTCCGTACTTTGAAGCTCTCAAGCAGCAGAGCCAACAGATAGCTACAGCAAAAGACAAATATGAGTGGCTGGTGAGTCGCATCGTGAAAAACCACAACGAGAACTGGTTGAGCGTCAGCCGAAAGATGCAGGCCTCTCCTGAGTACCAGGACTATGTCTACCTGGAAGGGACTCAGAAAGCCAAGAAGCTGTTTCTCCAGCACATCCATCGCCTCAAGCATGAGCACATTGAGCGCAGGAGGAAGCTGTACCTGGCAGCCCTGCCCTTAGCTTTTGAAGCTCTTATCCCCAACCTAGATGAAATAGACCACCTAAGCTGCATAAAAGCCAAAAAGCTGCTGGAAACCAAGCCAGAATTCTTGAAGTGGTTTGTTGTGCTTGAGGAGACGCCGTGGGATGCCACCAGCCACATTGACAACATGGAGAATGAGCGGATTCCCTTTGACTTAATGGACACCGTCCCTGCAGAGCAGCTGTACGAGGCCCACTTAGAGAAGCTACGGAACGAGAGGAAACGAGCTGAGATGAGAAGGGCGTTTAAAGAAAACCTGGAGACTTCTCCTTTCATCACTCCTGGCAAGCCTTGGGAAGAGGCCCGCAGTTTTATTATGAACGAAGATTTCTACCAGTGGCTAGAGGAATCTGTATACATGGATATTTATGGCAAACACCAAAAGCAGATTATAGACAAAGCGAAGGAAGAGTTTCAGGAGCTGCTGCTGGAATATTCAGAGTTGTTTTATGAGCTGGAGCTGGATGCTAAGCCCAGCAAGGAGAAGATGGGTGTCATCCAGGATGTGCTTGGGGAGGAACAGCGGTTTAAAGCGTTGCAGAAGCTCCAAGCGGAGCGGGATGCCCTCATTCTGAAGCACATTCATTTCGTGTACCACCCAACCAAGGAGACGTGTCCTAGCTGCCCCTCCTGCGTGGACGCTAAGATTGAGCACTTGGTGAGTTCTCGATTTATCCGACCGTCTGACCGGAATCAGAAGAATTCACTCTCTGACCCCAACATTGATAGAATCAACTTGGTGATCTTGGGCAAGGACGGCCTTGCCCGAGAGCTGGCCAATGAGATTCGAGCTCTTTGTACAAATGATGACAAGTATGTAATAGACGGGAAAATGTATGAGCTCTCCCTGAGGCCAATAGAAGGGAACGTCAGGCTTCCTGTGAACTCTTTCCAAACACCAACGTTTCAGCCCCATGGTTGTCTCTGCCTTTACAATTCAAAGGAGTCTCTGTCGTATGTGGTAGAAAGTATAGAGAAGAGCAGAGAGTCCACACTTGGCCGGCGAGATAATCATTTAGCCCATCTCCCCCTGACTTTAATTTTGGTTAACAAAAGAGGAGACACCAGTGGAGAGACCCTGCACAGCTTAATACAGCAGGGTCAGCAGATTGCTAGCAAACTTCAGTGTGTCTTTCTTGACCCTGCTTCCGCCGGCATCGGTTACGGGCGCAACATCAACGAGAAGCAGATCAGTCAGGTTTTGAAAGGTCTCCTGGACTCCAAGCGCAACTTAAACCTGGTCAGTTCTACCGCTAGCATCAAAGACCTGGCTGACGTCGACCTGCGGATCGTCATGTGTCTGATGTGTGGGGATCCTTTTAGTGCAGACGACATACTCTTTCCTGTCCTTCAGTCCCAAACCTGTAAATCTTCCCACTGTGGAAGCAACAACTCTGTTTTACTTGAACTCCCAATCGGACTACACAAGAAGCGCATCGAACTGTCTATTCTTTCATACCATTCCTCATTTAGCGTCCGAAAAAGCCGATTGGTCCATGGGTACATTGTTTTTTACTCAGCCAAACGTAAGGCCTCCTTGGCTATGTTACGTGCCTTTCTCTGTGAAGTGCAGGATATTATCCCTGTTCAGCTGGTTGCACTCACTGACGGCGCTATAGATGTCCTGGATAATGACTTAAGTCGGGAGCAGCTGACCGAAGGGGAGGAGATCGCTCAAGAAATTGATGGGAGGTTCACGAGTATCCCCTGTAGCCAACCCCAGCATAAACTGGAGATCTTCCACCCCTTTTTTAAAGATGTGGTGGACAAAAAGAACATCATTGAGGCTACGCATATGTACGACAATGCTGCCGAGGCCTGCAGCACCACCGAAGAGGTGTTTAACTCCCCCCGGGCAGGCTCCCCCCTCTGCAACTCCAACCTGCAGGACTCAGAGGAGGACATCGAGACCCCATCGTACAGCATGTTTCGAGAAGACACACCATTGCCCTCTCTGTCCAAAGACCATTCCAAGCTCTCTATGGAACTGGAGGGAAATGATGGGCTGTCCTTCATCATGAGCAACTTTGAGAGTAAACTGAACAACAAGGTGCCTCCGCCAGTCAGACCAAAGCCTCCTGTGCATTTTGAGATCACCAAGGGGGACCTGTCTTACCTGGACCAGGGCCACAGAGATGCACAGAGGAAGTCCGTCTCGTCGAGCACCTGGCTACCTCCAGACGGGTTCGATCCTTCTGATTATGCTGAACCCATGGACGCTGTGGTCAAGCCAAGGAATGAAGAAGAAAACATATACTCGGTGCCCCACGACAGCACACAGGGCAAGATCATCACCATTCGGAACATCAACAAAGCCCAGTCCAACGGCAGCGGGAACGGTTCCGACAGCGAAATGGACACCAGCTCCTTGGAGCGGGGCCGCAAGGTATCCATGGTGAGCAAGCCAGTGCTGTACAGGACGAGATGCAGCCGGCTGGGGAGGTTTGCTAGTTACCGAACCAGCTTCAGCGTGGGGAGCGATGACGAGCTTGGGCCCATCCGAAAGAAAGAGGAGGATCAGGCATCCCAGGGTTATAAAGGAGACAACGCTGTCATTCCATATGAGACCGATGAAGACCCGAGGAGGAGGAATATTCTTCGCAGTCTAAGAAGAAACACTAAGAAACCAAAGCCCAAACCCCGGCCATCGATCACAAAGGCAACCTGGGAGAGTACCTATTTTGGGGTGCCCTTGACAACCGTGGTGACTCCGGAGAAGCCGATTCCTGTGTTTATCGAGCGATGTATCGAGTACATTGAAGCCACAGGGCTGAGCACTGAAGGTATCTACCGGGTCAGCGGGAACAAGTCAGAGATGGAGAGTCTGCAGAGACAGTTTGATCAAGATCACAACCTGGATTTGGCAGAGAAGGACTTCACGGTGAACACCGTGGCGGGGGCCATGAAGAGCTTTTTCTCAGAACTGCCAGACCCCCTGGTCCCGTACAACATGCAGATTGACCTGGTGGAGGCCCACAAAATCAATGACCGGGAGCAGAAGTTACACGCCCTTAAGGAGGTACTCAAGAAGTTTCCAAAAGAGAACCATGAAGTCTTCAAATATGTCATCTCTCACCTGAACAAAGTCAGCCACAACAACAAGGTGAACCTCATGACCAGTGAGAACCTGTCCATCTGCTTCTGGCCCACCCTGATGCGGCCGGACTTCAGCACCATGGACGCCCTCACGGCCACGCGCACCTACCAGACAATCATCGAGCTCTTCATCCAGCAGTGCCCCTTCTTCTTCCACAACCGACCAATCAGCGAGCCCCCTGGTGCCACGCCCAGCTCCCCCTCTGCCCTGGCCTCCACCGTGCCCTTCCTCACCTCCACGCCCATCACAAGTCAGCCGTCGCCGCCCCAGTCGCCTCCGCCCACCCCCCAGTCCCCAATGCAGCCGCTGCTCCCCTCCCAACTTCAAGCTGAACACACGCTGTGAGCCCCCGAGGCCTCGGGCTGAAGGAGACGAGGTCTTCTCTCTTGACGGGGTGGCACTGGGCCTTGAACAGAACCAGGCCTGCGGGGCGGGGCGGGGCGGGGAGGGTCCCCTCTCCTCTCGCCTTCTCCAGCCCGCAGCACTAGCAGCCGCCAACAGAAGGCGCAGGCTGGGCCGGCCAGTGCCCTGAGCCCAGCACTGCAGACCTGGGGTTGGCCGCAGGCCGTGGCGGGAGCCCTACCCTGTGGCATGAACCCTTTTGTGGACTGAATGAGGCAGGCAGGGGCCCTCCACACCCTCACTACTCCCTGGACCCTCCCCACCATCTGTGCACACCAGCCTCAAGGCCACCGCCCACTGGGCAGAGCCTGGCACTGGCCGGGAGGAGAAGATCCTGAGGTCCGGCTGCCCCAGGGCAGGGCCAGCAGCCCCTCACGAGGACACGTCCCTCTGCTGCACCCAGCGCTCCCCACCCTTCGGGGGTGCGGCCTGCCCGGCAGCCTCCTTGGGAACATGTAGGCCAGCTCTGCCACCCTAAGGTACAGTCCCGTCTGGGGGCGTTGGCCCGGCAGGTCAGGACAGGGAGGGCAGCTTCGCCTGGACCAGGGAGCGTGGGCAGCGTCCGCCCCCATGCACCCTGCCCCACTTCACAGGCTTTGGGGATCCATTCCCTTTAAAACAAAGGAACACTGGAAGAAAAATGGAAAGACATCCCTCCCCCAATAATTTTTAAAAAGGAAGAAAACTACAGACCTCAAGATGAAGCTCTCTCCCCACCTCTGCCAAGAGGCACACACGTGGAGGGCAACCTGTCTGACAGCAAGACCGGGATGCCCAGGGGTGGCAGCCTGAGAGCCCGTTGGGGTCCCACTTACGTCCCGTCACCAGACCCCCCTCCCCCGCCCCAGGTGTACGGCTCGAGCCCCTTGGCAGAAAGAGCTGGGGGCCCGCCTGGCACCTGTCTGCCTTGGAGCACTGCGGTGCTGCGGGGACACTGCCCCGCCTGCACGGGGCGGGGGTGGGGTGGCGGGAGGTGCCTGCAGGCACGTGGGGGTTGGTTCCATGTGTTTGGTGTTGAAGTAGAATCATTTTCCTCCTGGGCCAGTAGGGCTGTCCGTGGGAAGTGAGCCATGTCAGGGGACTCCAAGGGTGTGACGGCTGCCAGTGCGGGCAGGGCCGGCCTTCCTGCTCCCCAGCCGTCAGCGCCCAGAGGAGCTGCCAGTACAGAGGCGGTCAGTCAGGACAAGGCAGCGTGCCTGCCTGTCACCATCCTCCATGGCCTCCCCCGCCCTTCCTGGCCTTTCCACTGGCCCCTGGGAGAAGCTTCCTCATCGTGCCCCCCTTTGCCCCAACCCACCCCCAAACAGCGACCCTGCTAAGGCTGCTACAGATACGGCTGCCCCCATCCCGTGGCTGGGCCATGCCTCCGCAGTGAAGAAGCCTGACTAAGGTACCCTGGGCATGGGGGCGTGGGGTGGAGGCCCGCCCGCCGCACAGTCCTCCGGGGGTCTCTTTGCACTTTAAGAAGCAGCACCTGTGGTATGTTTGAGGGCGCCTGACAAAGTAAGAGATGCCTCAGAACAGTCTTGGCCACCCCTGGCCCCAGACGCTTCCCACTGGCTGTTGGAGGGCGGGCCAGGCCCTGTGCTCACCGACTCTTCCTCTGGATAAGCTGGATGTCGCACTGTCTCTAGTTCTTGTACGGCAAAATAAGGTGCTTGGAAAAACTACATGTCCCCTGCGCGTCTTACCACCTCCTTAAGGACACAAGTCAGAAAACCTAAGGTACATGAACGTCTTACGTAAATGTCGGATGCCAGACCTTCTCTTTTGGCAGATCTGTGTCTGATGCTTTCTCGCTCGGGGCTTGGCTGGAGGGGGACGTTGCTTAGTTTTGACTTGAGGTCAGCAGACTCCTGCTTCTCTAGCCCTGCAGCTGCCCCAGTGCTGAGTCCCAGGCAGGTGTCCATGTTACTCCATTGATTAATCTCAGGCTTTTCCTAGGTCATGCTCGCTTATTCCCAGGCAGCCCGTCAAGGTATTGGGTGGGGGTAGAAGGGAAGCCTTGAGAATGACCTGGGACCACTGTCCCGTGTGTCAGCTAAAGCAGAAGAGGCTGCTTCCCTCCCACTGCCCAGCCTACGCGGCCACCTCTGTGGGCACCCTGCACCACCCTGCCGCCTGCAACCTTGGCTCTGCACCAGGAACTCCACAAGCCCCAGCTGCCCTGCCTTCCCACCACCCCCCCGAGACTGCGGTTCTCTAAGTGGTAGTGACTTCTGGAAGAAGAAAGGGCACCGTAACGGTGGACACCTGTGCTTTGCACCCTTAACCCTTGTGGGAGTAGTGGAGACCAGGCTTCCGCAGCTCCACGGGGTCGCCTCCGGTCCCACAGCGCCCCCTGCTCCAGCCCGGGCGGCTGCAGGGGCCCCTCAGGCCTGCACCCGGAATCCTGCCAGGGCTTTAAGCGCAGGTGGGGACTGGTGGCTCGTTCCCCAGAGAGCCACAATTGAACAGGAAGTTCCAGGGGTTCCTCTCTGTTTCCTTTGCTAACTTCTCATTTTCTGCTTCTCAGGCTGGCTTGGGCTTGGAGGACATTTCTCGATCGTTGCGAGTTGGCATTCCCACCAGCGCAGTGCTAGTTGGGGGGGCTGGGAGTGGTTGGTATTTGGACCAAATGGGCACTCGGAAGGGGACCCATGAAGGAGAGTGGGTGTGTGCGGGGGCAGGCCGACCTTAACTGGAACTCTGCCCACCCCACCCATTTATCTAGTGTGCTAAGCTCTAGAAAGTTCTCTCACAGGTCATTCTCATGTGAGTGGCACCACAACTCTAGGAATTGAGGGAGGGGCGGATGTTAATTAGCCTTGGCCAAAATGGGAAAGCCTGTTGGTGGAGTTACGGGACTTGTTCGCTGCCTCGCAGGAAATAGTGGGGCGCCTGGAAGCTCTTCCCCATCCAGTGTTCTTTAGACCCCAAAGGTGCAGACTCGAGGCCAGAAGTAAACAGCCCTGACTGAGTGTTCGGCTGGCTCTGGAGGGCGGCTTCATGGAAGGACGTGGCCCAGGGTTGGGCCGCGGCCTGTGAGTTTGCCGTCAGTTCTTGGCTGTGTTGCATGTGGTTATCACAGTGCATTTGTTCCTGCATTCTGTGAGTTCTTCCCAACACTTGACCTTTCGAGGATGAATGCTAAAATGCTGATTCCCAGGTTTTCCTCCAGGCTGAACGCATGCTGCAGGTGAGGTTCTTCTGGTAGGCTGTATCTTGGCCAGGGTGGGCAGAGGGTGACCTCCTCGGACCAGCACGCTGGCCAGAAGGGGCTGGAGAGCACGCCTCCGCTCGTCCCTACGCCTCAGTTGCCTGTGGAGGGGCGGCCCTGGCGGGCTGCCTGTCCCCAGGCTGGGAGGTCAAGCCAGGTCGCCGCAGCACTTGTGATTCGAGCTCCTCTCCACCCACGCCCTCCCCCGTCCCCTCCTGCAGGGAGATCCACACTGCCTGGGGGCTGTCTCAGGTGTCGGCTCTGTTCTGCTTGGCCAGTGGCTGCCTTCCCAGGAGGAGGAGGCTCCAGGGACTTGGGCTGGCCGCTGGGGACAGCCACGGCACTCACCCCCAGGGCCTCCAGGTCCCGCAGACGCTGGACGCAGGTCTTGCCCTCCTGTTGCTTGGCAGGTTCAAGCCACGCGTTCATGCTTAGGTGAAAGGACGACTCGTGTGTGCTGGAAACCTAGGTCACATCTGCTGGTGGTCCCATGGCAGAAGGCCTGGGGCGGGGAGGGGCCTACACCACGTCCTGTCATCTCCTCCCGGAGCCGTCTTTCCACCGGCTGCTGGCTGCGGACTCCTCGAGGCTCCGAGGTGACTGTCCGCGCCTCCTGCCCAAGAGCCTGCCTCGGCCAGCTCCAACAGCAGTGATGTTACACCTCAGTGTAGTCGAGACAGGGCGTAAATTATTGTTTGCATTAAGAAGAATCATGTTCCCTGTGTACATTAAAAAAAAGTCTGAATTGTATGGGAATAAAACTTGTTTGAAAATTTGGAGCAGTGCTGCCGCCAGCTCATTTTTCTGGTACTTGTGTTTCACGTTAAACGACCTTTATATGTGTTGGATTAACATATTTTGAGTTTCTTGAGGGTGGGGAGGGGGAACATTAATGGTATTGAAATGTGTTAGTAGTCTGGCTGTATGCCCAAAATTCTGTTTCGCAGCAAAAGTGGAGAACTGTATGTAAAGAAAGTATAACAATTATTTCTCTGTATTTTAGGGGCTTTAACCAGGACATCCTCTAGTTGGCATTAGGAATGTTTGCTTAATTTCCAGACTTTTTTTTTTTAAACACATCGTGGGTTTTTTGAGGCTCCAACCTGATTAGTGCATGGTCAGCCATCAACAGAGGCTGAGCATCTCCGACTGAGGTGTTCTCCATCTGGCTTTGTTTTTTAAAATCATGTATTTGCTACAAAGTATTGTACTTGTCTCAATGGGAATGGTGTACAAAACTGAAAAGGCCTTACGTGATCTGTATCATAGTTAATAAATCAATCTTGTAAAAAACCAAACC EMBV3_14638 GTTGGCTTCTCTGTACTGCCAAAGTATTCAATGGTAGCTGGAAGGCTGAGCAGTTTTGCT Gene GeneID:528425|NUDCD1:NM_001076880:23_cdna Constitutive 2 NULL GeneID:528425 14 GENE NUDCD1 MGC140389 NudC domain containing 1 EMBV3_20256 GACACGGCAGGGCAGGAAGACTACGACCGCCTGCATTGAGTTTCCCCAGCCCTGACAGTG Variant GeneID:513152|RHOC:NM_001046138:98_cdna 257^752 4 EMBV3_20041 GeneID:513152 3 GENE RHOC MGC140228 ras homolog gene family, member C EMBV3_08706 TCCTCATGTATTCGCACGACAACATCATCTGCGGCATCACCTCTGTTGCCTTCTCGCGCA Gene GeneID:281202|GNB2:NM_001097561:35_cdna Constitutive 0 NULL GeneID:281202 25 GENE GNB2 NULL guanine nucleotide binding protein (G protein), beta polypeptide 2 EMBV3_39675 GCCTTTAAATGTCTCCAGTACCTAGATAACTTTTCCTCCAGAATCAGCACTGCTCAGAGG Gene BVV0102_154576 - 1 EMBV3_43271 GK000024.2:54258313-54278631 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34135 ATTAGGTTCAAGTTGATGGGGAAGGAGTTGCAGGGGTAATTTCCACAGAGCATCTAGGGG Gene BVV0102_292657 + 0 NULL GK000003.2:16327593-16358534 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13913 TCTGCTGCTCCAGGCATCTGTAGGGTTTATTTCTCCTTGCAGTATTTTCCAGAAATGCCC Gene BVV0101_017179 + 1 EMBV3_22859 GK000030.2:80846689-80939905 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10593 ATTGCAGATATGTTGACTGTTGTGGCTGACTCCCATATGGGCCACTTCCTTCACCACAGC Gene BVT0101_059047 + 0 NULL GK000007.2:40605474-40638056 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212955 TCONS_00212956 TCONS_00212950 TCONS_00212954 TCONS_00212957 TCONS_00212961 TCONS_00212953 TCONS_00212958 TCONS_00212962 TCONS_00212959 1 XLOC_130293 NonCoding TCONS_00212954 XLOC_130293 NonCoding NonCoding - 7:40616106-40635770 - TSS159637 1109 1 TCONS_00212954_1 65 0.173128944995491 4 0.943803081930529 1.27889464917565e-30 4.14652935943745e-09 4.17825885823278e-32 9.29380795407017e-05 2.15999417057023e-129 1.18187092255585e-61 4.41176020813661e-05 1.43301924218639e-81 1.60720779656777e-143 0 6.92394266335133e-56 5.08740546468738e-42 2.80408527485295e-72 2.46603426309597e-22 0 0 0 0 0.00059914960800543 0.00115646470748466 0 0 0 0 4.47898664810026e-13 0.000417710345433396 6.58642055905187e-05 0 8.31713765359475e-05 0 NR_038319.1 LOC100505716 Homo sapiens uncharacterized LOC100505716 (LOC100505716), 1e-06 59.0 94.59 0.0324616771866546 0 noncoding CTTAACTTACTTCACCTGTACCTAGAGCTTGAGGGCTCCTGCAGAGGGCAAGAGGCATTCCAGGAACATCGTGGGGTCACACTGCCTGTCACATCCTCCCAGGACCCTGAGCCCCAAAAACAACCCAGCCTTGGGACCCTAGCCTGCCCAGTCTCCAGAGATGTGATACCAGCCAAGTGCCATCCTGCCTCCCACTGCTTAACAAGATCCTTGAGCTAGATGGGCCCAGAAAATCTCATCCACTCCCCTTGGCTTCTTTGGAATCAACACTGGCATGCCTGCCAGACTTCATGCCATGGAATGAGCTCTGGTCCTTAAATAGCTGATCCCAACTGAGATTCCAGCTGCAATTTACAGATCGTTTAGGCAACTGTGGGAAAACAGGAGAATGGACAGTATGTCTGAGGAGCTTCCTCTGCTCGTGACTGAAGGGGAATCAGATTTGAACCTGGTACCTGAAGATGGAGGAGGCCACCTGGAAGGAACAAAGAGCAGCCGCAAAGGGCTGAGAAGGATCCCTGGCCAACAGGAAATGAGGATCCCAGTCCTGCAACCACAAGGAACTGAAATCTGCCAACAGCAGTAACGAACTAGGAAGAGGATCCCAAATGCCAGATCACAGCAGTTGGAAACTTTGATTTCACCCTTGAAGTCTTCTCCAGCTGGAGCCAGAGTCAGCACAAAAGCAAAGGAGCTGAAGCCCATGGAGCTGTGGTGAAGGAAGTGGCCCATATGGGAGTCAGCCACAACAGTCAACATATTTGCAATTAACTTTTGTAGTTTCCACTTTGTAGGCCCAGACCCAATAAATAAATAGAAAAATTCATGTAATTTAAACAACTTTCAAAATTCATTTTGTGTCTATCCTCTCTATTCTACGCTGTTGTTACTGGGCTCCTTGCTGATTTGAGAACCTCATTGATTTAGAAGATGCCCTCAAGTCTGTAATTCAGACCAAATAACAAGAGTTCCTTGTGTCAAAGGGACTTCCTGCTGGTTCCAAACAGCCTGGTGACCTGCCTTTGTCAGAAGCACTCTTGAGTACAAATTGTGTATTGAGACTGACCCCCATTTGTCTGCAGTTCTTTATAAAGTATGTTTCCTTTGAG TCONS_00212964 TCONS_00212965 TCONS_00212963 TCONS_00212966 s 5' 2287 TCONS_00216641 r 5' 9710 EMBV3_43415 ATGTCTCCCAAATATTGGCCAAATTCCTGTCCAAGAGGAAAGGATATGAAGCAGCCCTCC Gene BVT0102_413819 + 0 NULL GK000010.2:62142172-62284070 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00021517 1 XLOC_012190 NonCoding TCONS_00021517 XLOC_012190 NonCoding NonCoding - 10:62182546-62184649 - TSS15407 2103 1 TCONS_00021517_3 105 0.662387066096053 1 0 0 0 0 0 0 0 0 0 0 0 1.08853290918949e-06 2.4228961886865e-05 0 7.45600496000755e-07 0 0 0 0.00146452865703067 1.53443507492745e-05 3.07763763973022e-05 0 0 0 0 0 4.02024344597785e-05 8.35826799336213e-06 0.000127886338627592 0 0 XR_232761.1 LOC786451 PREDICTED: Bos taurus F-box only protein 16-like (LOC786451), 9e-113 412 84.62 0.178316690442225 0 noncoding 0 0 0 0 -0.179275094312687 0.226124074861448 -0.151684701589277 0.0377157052623578 GTCATGTCCTACTCTTTGCAACCCAATGGACTGCGGTACACCAGGCTTCTCTGTCCTTTATTAACTCCCAGAGTTTGCTCAAAATCATGTCCATTGAGTCAATGATGCCATCCAACCATCTCATCTTCTGTCATCCCCTTCTCTTCCCGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTTCAATGATTCAGCTCTTTGCATCAGGTGGCCAAAATATTGGAGCTTCTACTCCAGCATTAGTCCTTCTAATGAATATTCAGGGTTCATTTCCTTCAAAATTAACTGCTTTCATCTCCTTGCAGTCCAAAGGACTCTCAAGAGTATTCTCCAGCACCACAATTTGAAAGCATCTATTCGTCAACATTCATCCTTCTTTATGGAGCAACTCTTGGAAGCCAAATGAACTGGTAAACTTGGTTATAATTTTGTGTTTTCCAGGTATAAAGAAAACCTTCCCCTTAAACTAATTGTGACTTACTGTAATTTGGTACATTATACTTTTATAAGCTGAATTGTAACATTTATCTTCTTCTCTCAACCTGATTGATCTGGCCAGTAACATATGCTTGTCTCCAAGCATAAGCCGTGTATGTCTAGGTATGCAAGGCCAATACAGTGAAACTGTGGATAGCTCATTATATCAGCTATGGCTCCTTTGGTCACTTGATTACTGCAACTGAATTACAACTGGATTAATCATTGTTTGAATCTGTTTTTTGTTTTCAAATTGTTTGTGATTTGTCTCCCTGCTGCACTCTGCCTTTGTCAATGTTAATAACTGTATTACTTTTATGCTGTCTTATTTATAAGATTGTTATCTCTTACAGTTATAGTGTGTAACCAGACCTCCAACAAAACTTCTATGACTAAACATCTGGAGGAAATGAATCACATTGGTAACATAAAATAATTGTAGTAGTGTGAGTCTAGGTATGGGAAGATGCAACAAGGGAAAATAACTCCTGGATCACAATCAGACAAGATCTAGACAGTCTTTAATTATCAATGGGTCTAATCCAAAATTTAACACTTGAGTTGGCATATCAAGAATTTTCACCTGATTTGAGATGAGACTCACAACAATATGGGACAAAATTTGATCATGAAATGTCTCCCAAATATTGGCCAAATTCCTGTCCAAGAGGAAAGGATATGAAGCAGCCCTCCAATGTGAGCCAGTGATCCCTGAAAAAAATTTAGGAAGGATAAGAATACCTGCCATCCAGCATCTATCAGACTACAGTCACTCCCTATGATGAGCCCTGAGGAAACTCAGGCTACAGGATACAGGCCCACAGATAGCTGAGGTGTGTATCAAGGAAATAATTTCAGTGGGCCCAGATTTTTGCATCTTCCCATACATAAAAAAGCACTAAATTCCTTAACTTGAGGTGCTGCCTCCTAGGCTTGAAGTCCTCAAAATTCCCACCTAATAAAACATAACTCTTAATTTTTGGTTATAATTTTTTTTTTAAGTCTACAAGTATAAAGTAGGCAATTCCCATATAGGAACAAAAGAAGCAGCATTTGGAACACTACCATCAGTACTGGACATTCCCAGAGAGATTAATCTGACAACACACAACAAGAAGCAATTAAAATGGTCACTGCCCTCTTTTCCAGAAGATTATGGAATGGATGTTGACGTGGGGAATTGTTATAGAGAAGAACTGACTCCATGTTGGATCTCTTTTACTTTAACGTTTGCTTCCTATTGCTTTTGTTCACCTAAAGGAAACTGTCCATACATATGGCCTGCCTCCAGAAAACTTCCCCTTCTGCCTGAATGTTACACCAAAATGCCTTTGATCAGGACTCTGTTCACCTGTGGATGGCTACAGGAAGAAGGAAATTAATACATCCCCCCACCAAGGCCAGTCATTCCAGGAGAGGTTTGTAAGAGTCACAGCCTTTTTTACTTTACCTCCTCAACTTCCCTGCTTATTTTATAAAAGAATCTGGTAGGCAAACCTCAATAAGATGGTTATTTTGAGATATTAGTCTGCCATATTCTCAGTCTGCTGGCTTTCCAAATAAAGTCGTATTCCTTGCCACAACATCTCTCTGATTCATTGGCTTGTTGTAAGGCGAGCAGAGGGAGC TCONS_00014338 TCONS_00014339 TCONS_00014340 TCONS_00017489 TCONS_00017490 TCONS_00017491 TCONS_00017492 TCONS_00017494 . 5' 30365 TCONS_00014338 TCONS_00014339 TCONS_00014340 . 5' 30365 EMBV3_41904 TCTTTGACTGCTTTGATGACATAGGGATCTGGATCCATTTGCAAGGATTGCCTGTGTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27199 TGTCCAGCTACACACCGAAGCACTCCGTGGCTTTCAGCAAGTGGCCGGAGCAGGTGCTGG Gene GeneID:100125320|LOC100125320:NM_001103350:56_cdna Constitutive 0 NULL GeneID:100125320 11 GENE LOC100125320 MGC148540 hypothetical protein LOC100125320 EMBV3_11945 AGCATTTTGAGAATCCTGGAAATAGGAAAGGAAATGGTGCAAAGTTATTGTTGTCGACCC Gene GeneID:510138|ALG6:NM_001075432:54_cdna Constitutive 2 NULL GeneID:510138 3 GENE ALG6 NULL asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) EMBV3_37056 GTATGCTGAATAACCAGTGACCGCAGACACCATTGCAGGCAGTGCTCATAGGACCCTAGA Gene BVV0102_217082 + 0 NULL GK000011.2:89908856-90012622 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05082 GAGCCTTGGAAACCTAAAGAAGCTCTGGAGGAGGATGGTATTATTACTGACAAGGCAGAC Gene GeneID:534781|PBK:NM_001102178:58_cdna UTR3_Alt 3 NULL GeneID:534781 8 GENE PBK MGC165897 PDZ binding kinase EMBV3_42379 GCCTGGGCAGATCATCATCGCACAGCCTCAGCAGGTGATGCAGCAGATCATCACGAACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10866 ACAGGGTGTCTGGTTTGCAAGTCACAGCCCAGAGCGCGTCAGCTGTCAGACAACTCATGT Gene GeneID:617657|LOC617657:XM_002697165:131_cdna Constitutive 0 NULL GeneID:617657 22 GENE LOC617657 NULL similar to RIKEN cDNA 1810048P08 EMBV3_15407 TGCGCACCAACACCAGCTCTTTGGAATTGGGTTCAGTGGTGTATTTTGCACTACCTGGAG Gene GeneID:782667|TP53INP1:XM_002692814:139_cdna UTR3_Alt 1 NULL GeneID:782667 14 GENE TP53INP1 NULL tumor protein p53 inducible nuclear protein 1 EMBV3_18202 TCTCAGCCCCCGAGTGTGCATACCCCGAGTGCGGACTCCAAGGCATTGCCCGAATCTGCA Gene GeneID:539825|MAST1:XM_002688774:109_cdna Constitutive 0 NULL GeneID:539825 7 GENE MAST1 NULL microtubule associated serine/threonine kinase 1 EMBV3_42628 GATGCAGTGTGAGAATGCAATCATGAGAATGACAATTACAAAACTGTGTAGTGACCTTGG Gene BVV0102_361223 + 0 NULL GK000021.2:25424182-25467797 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01838 GGTGGATTATTTGCCACTAGCCACCTGGGAAGCCCAGTGAAGATCTTTATCCGTAGACTA Gene GeneID:534247|HLCS:XM_002685154:128_cdna Constitutive 2 NULL GeneID:534247 1 GENE HLCS NULL holocarboxylase synthetase (biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)) ligase) EMBV3_30496 TCCTGTTCTCTCTCACCAGCCGGGGGGCCTTGTGAAGCATGAAACCCCAAAAATGTGAAA Gene GeneID:534928|PFKFB4:XM_002697052:526_cdna Constitutive 0 NULL GeneID:534928 22 GENE PFKFB4 NULL 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 EMBV3_39643 GTCAGGTCCCAGGCTTTATTTTGCTGACTGCATAGTGTTTGTCCAACTTCGGCTGCAAAG Gene BVV0102_168941 - 1 EMBV3_30183 GK000003.2:40025401-40377690 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24941 TCAGACAAACATGGGAAATACACTAAGCGGGGCCATCTCGCCCATAAAATGAACACAGAG Gene GeneID:534677|GTDC1:NM_001076035:115_cdna UTR3_Alt 2 NULL GeneID:534677 2 GENE GTDC1 MGC143010 glycosyltransferase-like domain containing 1 EMBV3_24909 TGGTCTGTGTTCTACAACATTCTCTTGAGCCAGGCCATCAGTGGAGTGTGTGTGGTTGTC Gene GeneID:505792|MVK:NM_001015528:57_cdna Constitutive 2 NULL GeneID:505792 17 GENE MVK MGC129086 mevalonate kinase EMBV3_03668 TGTTTGGGTTCCCAGCCACATCCCAGGGCCACACAGACCAACTGGGCTTACTGTATTAAT Gene BVT0102_405243 + 0 NULL GK000019.2:50849925-50867152 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40226 CTGGTGGCGAGGCACTGTGGTGCGGAGAGAAATTGGTGGTTTCAAAATGCCTAAGGACAA Gene GeneID:613455|IQCG:NM_001038195:92_cdna Constitutive 1 NULL GeneID:613455 1 GENE IQCG MGC134361 IQ motif containing G EMBV3_03390 TTGAAGGTCTGTGGCAACCCTGCATAGAGCAAGTCTATTGGCACCATTTTTTCCAACAGC Gene BVV0102_270135 + 0 NULL GK000014.2:4185764-4229511 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23294 AGTGAACGACATCCAGTCCTCGTCCTCAACAAGTCAGAACATGTCCCAGATCTCCAGGCA Gene GeneID:533445|ARNT2:XM_002696602:86_cdna Constitutive 0 NULL GeneID:533445 21 GENE ARNT2 NULL aryl-hydrocarbon receptor nuclear translocator 2 EMBV3_27178 GGCCGGGGAGTATGGAGCGGTCACTGACAGCTACCCGTGTACCCTGCGCCAGTACCTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38273 CTTCAAGCCAAAGTTATTGACACTCAACAGAAGGAGGCGATTCATAATCAGCTGTTAGAG Variant GeneID:616553|PFDN1:NM_001078062:38_cdna 90^230 2 EMBV3_09723 GeneID:616553 7 GENE PFDN1 NULL prefoldin subunit 1 EMBV3_01272 CCATGGCCAATACTGCGTGCATGCTGCGACTCTCCTTCTGTGATGGAAACATCATCAATC Gene GeneID:504623|LOC504623:XM_002699129:205_cdna Constitutive 0 NULL GeneID:504623 29 GENE LOC504623 NULL similar to olfactory receptor Olr1214 EMBV3_16666 CCTGCCACTAGGCCTAACATATCTCATCCTTGAAGACTCACAAAGACAGGAAGGCATTCT Gene GeneID:535227|CYP2U1:NM_001076050:68_cdna Constitutive 2 NULL GeneID:535227 6 GENE CYP2U1 MGC140497 cytochrome P450, family 2, subfamily U, polypeptide 1 EMBV3_08812 TCCTGCAGACCGAGGACAGCTGGGTGCCTACCTCAGCCTAGAAGAAGGGCTCGAGATACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34847 GGCTGAACAACTGGCTACTGGCCACTGCAGGCATTTCTTTATTTTTAAACCTGGACACGC Gene GeneID:617624|SLC44A2:NM_001098139:108_cdna Constitutive 2 NULL GeneID:617624 7 GENE SLC44A2 MGC151768 solute carrier family 44, member 2 EMBV3_31627 GACACCCACTGTATAAGATCAGGTGAGGCTTCTCAAAAAGTGACTGCCAGGGCTTTCCTG Gene BVT0102_074360 + 0 NULL GK000007.2:45571995-45577388 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42916 AGAGCTGGGCAGAGCCTTTCACCAGAAGGTTCTGTCTCCTACCCTAGGTCTGGGTCCTTG Gene BVV0102_060375 - 1 EMBV3_28087 GK000005.2:30548410-30641008 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32916 CTCCTTGTCATCGAGGTGCTTCTGTGGTTCTGTGTGAGGGAGGCTCTATTTGAGGTTTAG Gene BVT0102_082779 + 0 NULL GK000026.2:18309041-18348499 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151638 TCONS_00151637 TCONS_00151639 TCONS_00151640 1 XLOC_092151 Coding TCONS_00151640 XLOC_092151 Coding Coding ARHGAP19 26:18344880-18415276 = TSS113306 5360 1 TCONS_00151640_3 492 12 0.924028695219831 0.000393306234917305 0.000817403774459794 0.000272772309828808 0.000573663121146566 0.00117457338224153 0.000227933432234145 0.000430793262769234 0.000840842806454668 0.00191720812040322 0.000429836845335925 0.000195535887714552 9.20824675671982e-06 5.93674201526814e-06 9.84731946283761e-06 0.000328464437468284 0.000503500303071818 0.00137668532141962 0.00127021326362412 0.000661399220826734 0.000693052901309555 0.000466513457258829 0.00108812809983351 0.000973197699237913 0.00135021917260409 0.00106826651369486 0.00135966792191513 0.000839400126675452 1.51383179585555e-06 1.03691821796973e-05 1.27256090032706e-05 XM_605328.5 ARHGAP19 PREDICTED: Bos taurus Rho GTPase activating protein 19 (ARHGAP19), 0.0 9622 100.00 0.995149253731343 NM_032900.5 ARHGAP19 Homo sapiens Rho GTPase activating protein 19 (ARHGAP19), 0.0 3721 75.23 0.997574626865672 TCONS_00151640_3 sp|Q14CB8|RHG19_HUMAN RHG19_HUMAN Rho GTPase-activating protein 19; 0.0 919 92.68 0.997967479674797 1 coding 1 1 1 1 -0.0013226886052409 0.99005385392797 -0.0106195124277998 0.83413896466794 GGCCAGAGTTGGGGGCGGTGAAAGAAGTTTGCTGACTAAGATGGCGACTGAGGCGCAGAGTGAAGGGGAGGTGCCAGCCCCGGAGCCTGGCCGGAGTGAAGCTATCTGCAACTTTGTCATCTGCAATGACTCTTCCCTTCAAAGTCAGCCCATTATCTTCAATCCTGACTTTTTTGTGGAGAAACTCCGACATGAGAAACCTGAGGTGTTCACTGAGTTGGTGGTCAGCAATATTACAAGACTTATTGATCTACCTGGAACTGAGTTGGCTCAGCTAATGGGAGAAGAGGACCTTAAGTTGCCTGGTGGGGCAGGCCCGGCATCAGGATTCTTCCGGTCTCTAATGTCTCTCAAGCGAAAGGAAAAAGGAGTAGTCTTTGGATCCCCACTGACAGAGGAAGGCATTGCCCAGATATACCAACTGATTGAATATCTACACAAGAACTTACGAGTAGAGGGTTTGTTTAGAGTACCAGGGAATAGTGTCCGACAGCAGATTTTAAGAGATGCTCTCAATAATGGAACTGATATTGACTTGGAATCAGGGGAGTTTCACTCAAATGATGTTGCTACCTTGCTGAAGATGTTTCTAGGAGAGTTACCTGAGCCCCTGCTGACACATAAACATTTTCACGCACACCTCAAAATTGCTGATTTGATGCAGTTTGATGATAAAGGAAACAAGACCAGTGTACCAGATAAGGAACGGCAAATCGAGGCTCTTCAGTTGCTCTTCCTCATACTCCCTCCACCCAATCGTAACTTGCTGAAGTTACTGCTTGATCTCCTGTACCAGACAGCAAAGAAACAAGACAAGAATAAGATGTCCGCCTATAACCTTGCCCTTATGTTTGCACCTCATGTCTTATGGCCCAAAAATGCCACTGCAAATGACCTTCAAGAGAATATCACAAAATTAAATGATGGGATGGCTTTTATGATTAAACACTCTCAGAAACTTTTTAAGGCTCCTGCTTATATTCGGGAATGTGCCAGATTGCACTATTTGGGTTCCAGAACTCAAGCATCAAAGGATGATCTTGATCTGATAGCTTCATGTCAAACCAGGTCCTTCCAACTGGCAAAATCTCAAAAATGGAACCGGGTTGATTCCTGCTCTCATCAGGAGGAGACCCAGCAGCGTACGGAAGAGGCACTAAGAGAATTGTTCCAACACGTTCATAATATGCCAGAGTCGGCGAAGAAGAAACAGCTCATCAGACAGTTTAATAAGCATTCTGGGACCCAGACACCGGGACGTGAGCCTTCTACTCCCCCGGTGCGGAAAAGGGCTCGCTCACGGTCCTTCAGTGGCCTCATTAAGCGGAAGGTCCTGGGAAATCAGATGATGTCAGAAAAGAAAAACAAGTACCCTACTCCGGATTCGGTAGCCATTGGTGAATTGAAGAGAGCCAGCAAAGAAAATATGAACTTGTTATTTTCTGGCTCTCCAGCTGTCATGATGACACCAACAAGACTGAAATGGCCTGAGGGGAAGAAAGAGGGGAAAAAAGCCTAGGATTCTTCTGAAGGATCCAGAGTTTTCCTGTTGTCCACCCAGAATTCTTCCTTCTGTGGCCCAGTGGCCGTGACCACCCACAGAGAAGCTGGGACTTGCAGCGCGCTTGCTGCGTGTTGAATTGTGAAAGCCAACTAATCCTGTGACTCAACTGATACCTCTAACCTCACTCAGCGGAGATGTCTGCAGATTCTGCCTACTAAACCGGTGCTAGCGAGTCTCTCTTTAAAAAAAATGTTCTGGGGAAACCACTAAACAGCCACACCAGCTTACACACAGCACAGTCAATGAGCAGAACCAGGCAGACTCCTCTGCCTAGTCCATGTGTGTGTTTAGGCAGGTTCTGTTTTTTGAAAATTTGAAGTTTGTGCTCAGCTGCAGTGATTTTTTTAAAAAAGTGCAGACAATCCTAGTGGATCGATGTTATTCTTAACTGATAGTTTGGACTTTTCTCTGTTTTGATAGTATTGGGGATATGTTGGGTATTGTTTTTGTTTATTTGTTTTTTCTTATTTTTTAAAAAGCCATATTTTGGATAGGTAGTTGAAATGGGCTCTAAGCCAGATGTCTTTTCTCTTTTCACCTTAAGCTCTTTGTCTTATGAGGCTGTACTCCTCAGTACCTATTTGTGTCCAAAGAATTTATTGCTTTCCTGAGAATTTTTTTTTTTTATGATTTCTTGGGCCTGAGATTATAGGTGTTTGGCCTGTAGGACTGAATAATTCAGAATGATGCAGTATCTTAACAAATGATGTTAAACTGTGTCCTTTCCTCCCTCCTTCCTTTCTGTCTCCCTCCCTGTCTTCCTCTTTTCCTCAGTGATGTCAGAATAGTCATATGGTTGCTGAACTCCTTCCTCCATTCAGATTCTTCTCACCTAAAACATCTCTGGTGCCAATGTGGTGCCTTCTCTGCCCAGTCACTGTGACTCAAGGCATGTCACCAACAGTTTACTTGAGGTTTGCTGAAATACCTGTATGTAGGGGAAGCTCCGGCGTAGGATTAGGCTGGAGCTGGCTTTATGGCCAGGACGACTCTTATGGATGAGATTATACTGCATCTCTCTAAGGGATCAGGTGTGCAGGCTGGACCGTCTCCTGAGAGCAAGCTGGAGTCGGAGGACGGAAGCGAGCATGTTTCTCTGCAGGACTGAGAGATTTAAAGGGAAGAATGTTCTTGTTTGAAAGCAGTTGTGGTTTATCACCTGTGTTGAAGAGTGGCTGCTGGCCCGCCCCTTTCCTTGTCACAGTGGGCACCGGGGGTAGTTGGGAGATGGGCTGGAGCTTTGACTGGGTTGGGGATGTTCACATGTGTTTGAGAGGAGTGGCAAGGCTCTGATCCAGGTGAGACGTCCCTGTCCAGAGAGAGCAGGGCAGGAGGGAGCTTATGCCTGCTCTGTTAGACGCGTAACCACTCTTACCCCGTGTGCCGGAGCTGAGTCAGGCCTCGGGGGAGAGGCAGTTGCCCAGCAAACTGTGACTTCTGCCCTATTTTTAAACTGTTGAAATGGTGTGTTATTGCTGAAACAAAACATGATTCTGGGGAGCACAGTTTGCTTTTGTATCTGGAAGTCAGTCTTGTCTGCTGTATTTTCTGTTTCTTCTGCCGCTGTAACAACAGTAGTGGAGAAAAATGGGAAATTTGGCCATCCAACTTGATAGATTGTGAATAATAGATGGTTAGGAGTACAAAGCTGCTCAAAAGTCCCTTTCTCTACAGTAGTTTTATGTCATTCTTAAAAAATACTTATTAGCAAGTTCATACATGTAGGGTTCTATTTGACTTTTTTCCTTATAAAATTTCTTGCACCAGCTATCAGTGAGTTCAAACAGACCCCTTCTGGTATGGCCGGGTGAGAGTGGTGTCCTCCCTTAACTCTGTACTTGCTCTCTTAGTTTGTCTAAGCATCTCATTCTGGAGTGGTGCGGTCTGGCACAGGTGGAGGGAGCGGAGCAGTGGCCTCATACCTCCTTGTCATCGAGGTGCTTCTGTGGTTCTGTGTGAGGGAGGCTCTATTTGAGGTTTAGTTGGTTGAGTGCAGTTAGTAATCCAGGCTGGTGCTCTGGGGCTGGGGTGGTGAGAGATCCTGTCACGTGTTTTTATATAGCTTGCCCCTTTGGGCAGTTTATGTGGATATTTGGGTATGTGTGTTCCATTAAAGTATTTATTAAATATGATTTCCCTTGCTGTAAGGGTATGATAGGTCTTTTCTTGTTTGTTTTTTAACAGAAGCTATGATGTAGTTGGAATCCAGATTTGAGAAATAAACAGCATAACCTCTTCTGCCTTATAATATGTAACTGTTCTAATCCTGTGGAATCTTACACAGAATGAAAAAACAAAGACCTTTTAAGCATTTGCTACAGGAGGATACTATTGCCCTTCTGACTTGGTGGGCAGGCATTTTTGAGCCAGTATTCAACAATTTAAAAAATATGTAATATTTAAAAATTCTGTTTTATGTTTGTTTTTCATGTTGAAACAATTTCTTTGGAAATGCCTCTTGTTTTTAAATTTTCCTTTCTTTCTGGGGTCAGTTGCGGTGGATTTTGATGTAATATTAATGGGGGGCAGTATATCTTGTGTGGGCTCAAGCATAAAAAATGCAGACCACTTCCTTAATTCAGATCAGTTGGCACTGGGTGAGCTATCCTGGTTGAATCAGTGAAAACCTTGGGCACTGGACTCCTAACTTTCTAACTTGGTACAGTGGTGCAGTGTTCCTGCTTTGAAAGACTCCACTGCAGCAATGAAAGAGAATTAGATGGTACTGACTGTACCTGAGTGCCAAAACACAGTCAAGGAGGTGGTACCTCATGAATCGAAACTGAAACTCTAGTTGGCCCTCCACCAGCTCATTACCCCGAACGAATCTTCCGTAGTCAGGAATGACAGTGGGCTGCCTTGGGAAACAGAGCAATTTGGGGTTAACTGCGGTGATCACTGGGTGTCCAGCGGTGGCTGTTTTGTTGGCTTGTAAGAAAGCCAGTGGTTCCAGAGTGTCAGAGCAGAGCCATTCTCTCCTCTGGAACAGCAGTGTTTCTGTTCAGCTTTCCTCATAGAAACCTCTGTTAGGATACGGTTTAAAACACCGCCTTCCGGGAGATCCTGTGGTTGCAGAATGGTCTCTCGAGTTTATCTGCTTCCTTACTTCCTGCAGAGCCTCACACAGATGTCTGAAACTGGCTCTCATTCTGAAGTCTTTTCTGAGTAGAATTCCTTTCCCCAGGAGAGAGCTGTATCCATCTGGAAGCCTTGGTACCGAAGACAGGACCTGGATCCAAAGCTAGATACCAGCAGTTGGCAGGACTGCTGTAGAAACTGGGGAAGATTCAGGTTTATAAGATGCACAAGCTTTTCAGACCAGTGGTAATTAATCTGATCTAAAACTCACTGTGGGAAAGCTGGCTTTCCTCCGCAGGTCATGCTGAGCTGTTTCCACAGGTGGAGAGTGGATGGGAGGGCTGAGGAGGAGGTGGAGTTAAGACTTACTAGCCTGAGTGCTTGGGTTACCATGGAAACTGGAGTGTGGGAGGCCACAGCAGATGCTAAGGAGCCATTGAGCACTCCCCCAGACATGTCTGGGGACCAGCAGAACTGGTTGGGAAAAGCACCCCTGCCCCAGGGTCCTTTACTACATAGCAAGGCTTGCCTTTTCACTACCCCCAAGCTCGCTCAACAAGAGAAGCAAGGTTTCTTAACTGTCTAACCATTTTTAATTTTTTCATTCTTATTCAACTATATCCTGTATATATATATATGTAACTGTAAAGAAACATGTATTGTTTTTCTTTTATATTCATGTAATATTCTGAAATTAAATTTCTTTTGTTTCATATCT EMBV3_10591 GCGTTTCAGGCTTTCCTCGGCTTTTTGTGAACAGTGTGGTTGGTCTTCATTACCTGTGCC Gene BVT0102_066754 + 0 NULL GK000003.2:121203769-121212556 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171659 TCONS_00171661 1 XLOC_103886 Coding TCONS_00171661 XLOC_103886 NonCoding Coding ING5 3:121199173-121206672 j TSS128005 3297 2 TCONS_00171661_5 123 4 0.560816217658042 0.000255407420809955 5.08972014796615e-05 3.89181103963328e-10 0.000181733515249122 3.28719702350755e-09 1.87160343439182e-09 0.000218599822696195 0.000334435745650454 0.000155213635921508 0.00020179329251384 7.27886004560205e-05 3.03661654063383e-05 1.74224359717091e-05 3.63897648165071e-09 1.96278387382864e-05 0.000901715546968896 0.000675521430144141 2.76221638360999e-08 4.53146394719043e-05 2.080881241441e-05 1.48633012221315e-13 0.0016468080717244 5.30373150830547e-09 4.07658493475606e-07 2.23606428599443e-08 4.6306866926927e-09 0.00018871816581865 0.000446962807964867 0.000116165234676156 0.000311949968625231 NM_001040580.1 ING5 Bos taurus inhibitor of growth family, member 5 (ING5), mRNA. 0.0 643 100.00 0.10767364270549 NM_025454.2 Ing5 Mus musculus inhibitor of growth family, member 5 (Ing5), mRNA. 4e-113 414 80.78 0.138610858356081 0 noncoding 0 1 1 1 -0.0397112796076256 0.781177672576092 0.0213174472286194 0.671047489060496 AGTTACTGCTGAGGCTGCAGACGTGCTCACCTGAGCAGGTCGGAGTTCACCGACACCATCCTATCTGTGCACCCCTCTGATGTGCTGGACATGCCCGTGGACCCGAACGAGCCCACCTACTGCCTCTGCCACCAGGTGTCCTACGGGGAGATGATCGGCTGCGACAACCCGGACTGCCCCATCGAGTGGTTTCACTTTGCCTGTGTGGACCTGACCACGAAGCCCAAAGGAAAATGGTTCTGTCCCCGCTGTGTTCAGGAGAGGAGGAAGAAGAAGTGAGGCCGGGGCGGACGCTGGGCAAGACGAGCGCGTTAGCGTGTTCCCTCATTCATGTTGCAATATTTTACATTTATTTTAAAACTACCTTGTTTCCAACGATATTTAATAACTCAACGGCCAGTTGTCATTCTGGATGTTTCCTTGAACAGACGAGAAGCCACCTGAGCCCTGTTGCACAGAGAAGCAATCTTAGGGGACTTGCCACAGTGACTCAGATCTCGTGACTTTTGTACAGACCCCAGGCCCTGAGCACGGTGGTCACCCCTGGTGGCCCCGGGACTCCGTGGGGTGCGTGGCTGGTGCACTGCCGTCACGTCGCATTTGGAGCCATGAGCCCTGGCGTCTGGCTGGCTTCCTGGGGCGGCTTGCCAAGGCCCCGGTGCCACCGCGGGCACCTCTGAGCCTTGCTGGGAGCCCAGGGTGCGCCCGGAAGTGCCAGCTCTCCCCGGGGGTTCCGCCTCGCTGTGCACTGCCTTTGCGTTTGAACTGCCTGTTCCCTCCATGAGGGGTTTTCTTTCCGGAGTAAACAACTCACCACTAGCAAACGGGCTGTGGGTGCCGTGACCGGAACGGATAAGAGACAGTCCAGCGGAGGGCCGATGGCCCGTTTCTCCGGGAATTCCGACTCTGTGCTGTGAAGATGAGTTACCGTGGTAGCGTGAAGATAGTGGTCTGTGTGAGTATGAAGTGAGCCCAGGCTGCCGGGAGCTGACCTGAGGCCTGCTGACTTGCACAGCAGGTCAGCCGCTTAGACTGAGAGGTGACTATTATGTGATGTGATTTCTGAGCCTCCCGGGCCGCAGGAGCAGTTCTGCATGAAGTGAGGAAACCCGCGTGTCTTTACTCCCCAGTCAGCACGTGGTCTTGGACCCGCCTTGCTGGTCACAGTGTGGGTGGTCCAGGCGTGGACGCCCTGCGTGGCTTCTGCAGGCGCCCTGTCCCCTGAGGCCGTCCAGGCGTGTGTTTGGAAGACGGTGGGCATGGTGGCTCTGCCTCAGGCTCGGGGTCCGCGACAGACTGGAGGCCCAGCTTCCCGGCGTGGACAAAGCGCATCCTGTCTGTGAGGAGGGCCATCGACAGGAACCCACCTGCTTCCCCCTGACGGCCACCCGTCCTGTGCGCTTCCGAGAGAGGAGACAGCGGGCAGGAGCCACAGAGGCCGTGTCCTGTGGGGCCACTGCCCGCGGGGCAGCTACCATCCGGCAGGCGACGGGGGCCACCCTGGGTCTGCATCCGAGCGCCCTGCGTCTGACCCAGTCCTCGCCAGAGGGAGCTGGGAGGCGGCGGGCGGTCTGTGCAGCGTGTGGCTCCGGGGCTCCCGTGGGCCGGTGCGGGGTCTGGCCGCAGCTGCCCCTCAGCCCCGGGCTCGTCCCGGCCACGCAACGTTCCTGAGGAAGGGCCCGCTGGCACCCTCAGCCTCTGCCTTGGCCGGAAACCCTGGGGGAGTTGGTGTTTAGTAACTTAGGTTTTTGTTAGCATGGATGTTTAAAGATTAGGGGAGTAAATTGTGGAAAAGTTTTTTTTCACTCCTTTACCAGTTTTTGTGGAGAAGATAGGTAAGTACAGTACACTTGTGGTGATTCCTCATACGCTCATTTCATCTTCCACCCATTCACACCACTGTGCCCACGGGACGGGGGATTTGTGGACGCAGGTGGACGGCGGTCCTGAGCCTCAGCGGGGTGCCTGCCGCCCTGGCCGTTCCCCAGGAGGGTGACTGACTTCCCTGCCGGAAGCTTTCGTTTAAAGTTGGCTGGTGTTGCCCTGCTTGTCACCATGTAACGTGCCATCTGTGCACCTTTTTGGGAAAGTTTCTGTGCTTATATGTTTCCAGTGTTTACTTTTGCTGGTTACAGTAATATCACTGAAATAACATGCACGTAGCTTTGGAGAAAATGGAAAACACGAGCAGGAGAGAGAGGGTCCCCGGGACGTTTTTGGGCCCCGGCCGAATGCCTCCTGACCATGCCGCTGCCCGCGAGGCGGAAGATGCGGGGGAGGCCCTGTGGTCGGGAGCGTCCCGGCCCGCGCTGCTCGCCCCTCGCCTGCCGCCCCCGTCAGGATGAGACGCTCGCTGGTCTTGGGCGCTGGCGCTGGGGGCAGGCTGGCACTGTCGCAGCATTCCTGAGCCAGCGAGGGCGCGGGCCCCCAGGGTCCTCGGGGTCTGCTTGTGAGGGAAGAGGCTTCTCGTGCAGAGAAGCGGCGCCGTCCGTCTCCAGTGCTGCTCGTACCCGTCAGCAGTGGTTGAAACATCCACTGGTTTTCCCGCAGGAGAGCATGCGCTGCGTAGTAGGAGCAGGTGTTAAGCCGTGCCCCCGCCTCTGCGGCGGAGCTTGAGGGGCTCATGGCTGGCACACAAGGCCTGTGACCGTCCCTGCCGCGGGCTGGGCCCCTGAGCAGGCGGACGCGATCCTGGTGCTGGCAGGGCCACCTGAGCTGGGCAGCCCCCGTCTGCCCCAAGGCGGCAGCCTTCCGGATGCAGCTCCTGGGCAGTTGCGGGGGCGTGTGGGGCACTGGCCGGCCGCCTGTCAGTCCTGCCTCCTGACCCGTCGCCGGCAGCCCTCGGCCAGGACTGCTTCGAGCAATAACACTGTCCAAGGAGCAGCTTCCCCGCGTGCCAGGGACTGCCCTGTGCGGGGCTGGGACACTTAGCGTTTCAGGCTTTCCTCGGCTTTTTGTGAACAGTGTGGTTGGTCTTCATTACCTGTGCCGAGAGGAATTTTAAAGTGGGAAGTCTAAGAAAAGCGTTCTCATTCAGGAGAGAGCTCTGTGAAGTTCCCTCCCCGCTGGTATGTATCTGTGGTCATCTTACCACATCTCATCCAAAAAGATGGTGCAGCTTTAACCTGAACGTTACGTTGTGTTTTCAAGGAATTATTATTGATGTTCTCTTTGTAAAAGAAAGAAATATTGTAAATCTTTTTATTAAATGATGTAAAGATGTATATCTGTATTTTTGGATCATGTTATAGATGATGGATATATTGTTTAACGAATAAAGTATTTTTTGGAACAAAC EMBV3_26201 TGAGAGACGACCTAGAAGCGACTGTGTGCAAACCGACAGGCCTTGGGAGCTGACGAGTGA Gene GeneID:786342|LOC786342:XM_002692012:8_cdna Constitutive 0 NULL GeneID:786342 12 GENE LOC786342 NULL similar to putative nuclear protein EMBV3_27553 AACACCTATACCTACCTGTTCTCCCAACCGTCTCGGATGCCCATCTACCCCAAGTGGATG Gene GeneID:280748|CEL:NM_001013583:464_cdna Constitutive 0 NULL GeneID:280748 11 GENE CEL NULL carboxyl ester lipase (bile salt-stimulated lipase) EMBV3_37882 AGCTTTGGCCGTGGCCCCCTCGCCCCTTCTAGAAGTTTTTGCACAGAACTTCATTTTGGA Gene BVT0101_028889 + 0 NULL GK000029.2:44948734-44960929 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36627 CGAGTACCAGCTGATTGACTGCGCCCAGTAATGTGACTGCCATCATCTTCGTGGTTGCCA Variant GeneID:281793|GNAS:NM_181021:727_cdna 392^579 2 EMBV3_03406 GeneID:281793 13 GENE GNAS GNAS1 MGC148689 MGC152036 GNAS complex locus EMBV3_28888 AGAGAGCTTTGCTTCTGCAGCAGTTACAAGGTAACCTCCGTGGCTACAACCTGGCCACCC Variant GeneID:531522|CIZ1:XM_002691671:436_cdna 794^865 1 EMBV3_43392 GeneID:531522 11 GENE CIZ1 NULL CDKN1A interacting zinc finger protein 1 EMBV3_20347 GTGACGTGTGAATGTCGTGACCGTTATATTCCACTGGAGGCCTATTAGGAAGCACTTACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00418 GGTGTTATATCCAAGACGTCATTGCCAAACCCAATGGCATAAAACTTCCTTGTTTTCTCC Gene BVT0102_276290 - 1 EMBV3_31410 GK000015.2:25314099-25366837 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37054 AAGAAGAGGCTCCGTGTTGACAAATGGTGGGGAAACAGAAAAGAACTGGCCACTGTTCGC Gene GeneID:100335936|LOC100335936:XR_083897:343_cdna Constitutive 0 NULL GeneID:100335936 17 PSEUDO LOC100335936 NULL ribosomal protein L9-like EMBV3_41264 GGGGACCACCCAAGAAAACGTGGGAACCAGATCTGGAAACACCTACCACATCTGAAGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35828 ACAGTGCTGCATGGGACAAAAGCAGGCTCAGCAAGTAATGGAAGGGACAGGTGCCAGTTA Gene GeneID:533968|CNOT1:XM_002694799:635_cdna Constitutive 0 NULL GeneID:533968 18 GENE CNOT1 NULL CCR4-NOT transcription complex, subunit 1 EMBV3_41360 AATTCAGGAATGTGAATCTGAAGCACGCAGAAGCATGTGGGATCCATGCTGGCCCTTTGG Gene GeneID:100126817|LOC100126817:XM_002688978:10_cdna Constitutive 1 NULL GeneID:100126817 7 GENE LOC100126817 MGC148346 hypothetical protein LOC100126817 EMBV3_32931 CAGCTCCGGAAAGCAACAACCGTCAACAAAGTCCGTCTCAGGAAAAGATTGACCAACTGG Gene GeneID:511298|NUB1:NM_001080906:628_cdna Constitutive 0 NULL GeneID:511298 4 GENE NUB1 NULL negative regulator of ubiquitin-like proteins 1 EMBV3_00842 ACAGCGGTTTGCCATTAGGGTATTCATTCAGATAATGTTTTCCTACTAGAAATTTAAAAC Gene GeneID:510494|ST13:NM_001101926:153_cdna Constitutive 2 NULL GeneID:510494 5 GENE ST13 MGC165934 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) EMBV3_28592 GCCAAAATCTCTTCCCAGGCCTAAAACTCAGGAGAGCACATCAACAAAGCCAGTGTCAGC Gene GeneID:616552|MGC133736:NM_001080323:20_cdna Constitutive 2 NULL GeneID:616552 6 GENE MGC133736 NULL hypothetical LOC616552 EMBV3_30377 TCATGTTTCACCGTCACCACTGGATTTCAGGACTAGACATCACTGACATGACCCCCATCC Gene BVV0102_158279 + 0 NULL GK000019.2:52083651-52088428 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097682 TCONS_00097683 1 XLOC_058315 Coding TCONS_00097682 XLOC_058315 NonCoding Coding C19H17orf89 19:52086963-52089778 j TSS72329 1805 2 TCONS_00097682_6 126 0.0587257617728532 2 0.359275053304904 0.000129483983667214 0.00020503279258623 0.000521199054621323 0.000401624545190683 9.98253544921935e-05 0.000331637394569714 3.56557392404451e-05 2.69417224028528e-08 1.07100306552374e-07 0.000183968446297844 3.27280548189938e-06 4.98087504143151e-42 0.000413497377024359 6.21236866817001e-05 8.59962590969034e-05 1.3576429450042e-74 3.36142562456915e-52 5.05016791024786e-72 0.000444130035474693 0.000159143898527433 0.000170592829082229 1.6711927344715e-05 5.98267941101254e-06 4.28588651117468e-45 3.34477516054357e-07 3.94412310968019e-08 0.000338706172671569 3.12317805414405e-48 3.1400210053321e-06 6.53568109792781e-76 XM_003583634.2 C19H17orf89 PREDICTED: Bos taurus chromosome 19 open reading frame, human C17orf89 (C19H17orf89), transcript variant 2, mRNA. 8e-126 455 100.00 0.139058171745152 0 noncoding 0 0 0 0 -0.943194748089436 0.00993571655313998 -0.0888467939016795 0.269075365399652 TGAGCTGGTGCCCAAGATGTCAAGGTCCTGGGTTCCCTCGACTCGGCTAAGAACACCCTGACAGGAGGCCGTTAGGAAGGACTACAAGCTCCAATCCACGTCCCTGGGCGCCTGGCACTGATGGCCTCAAGGAGCAAGCGTCTAAAACCTCGAAAGCTCTTGGGGCTAAAAGGACTGGAAACACATTAGGCGTGCATGAGCAGAGGGGAATGGGTTTTCCAGCCTTGCACACCTAAGGATTTGGGGAGAATAAGATGCAGTGAACCCACAGTAAAGATCAGATCAGATACTGTAAGATTTGTTTTGTCATCTGCAGAATGAGTGCATGGGCTGTGAACAAGCTGCCTTGCGAGTCTCATTCTTTAAAGAATTCTCACCAAAGGCATGTCATCTGAGTCTGGCGAAGCATCTAGAAGTAACTACCAGGTTACAGCACAGACCAAAGAGAAAACAGCGACACCATGAGGGACAGGTCCGAGCTGTAGGAACCTGATACTGATGGGTTTTTTCCTTACTTAGAAAAAAAGGTGGGGGTTGCTCTTCCAGACAAAGGGGTGAAGAACCCAGGGAGGGTCCAGTTTTAGGAACCCGGTGCCTGTGAGACTTGCTCCACGGGGTTGCCCCACCCTCCCTTCCACAGCCTCTGGAGTCTGAGCCCAGGTCCATCCTGGCCAGGCTCCTGCCCACTCTGGTCCCACCCCTCATCCTGAGCTTCGGTAAGGCCGCAGCAGCACACGTGCTGGAGCTCCAGGGAGACCCAGCGGGACCCAGGAGGATTTCAGCATCCTGAGTGCTGCCTGCTGGGCATGTCATCCCAGAGCCTCCTTCCCCAAGGTGTGGAGGTCACATTGTCCTCTGGCTTCACCCAGGCCCTGCTGTCCCAGAGCACCCGTGCCCTGAGGCCTGGAGCTGTTCCCTCTTGTAAAGGCTCCTCCACTTCCCCCACAAAGTGCTGAAACCCCTTATCTCAGCTGTCATCCCAGTGAAATGCAGTTCCCAGGGCAGCCTTGGAGGGGAGCCATACGCCGTTCAAGGTTTTTTAGGACTGTTAAAAGACTGGCTGGCTGGGCAGTCATGTTTCACCGTCACCACTGGATTTCAGGACTAGACATCACTGACATGACCCCCATCCCGGCCAGAGGTGATGGCCCCTCAGGTTGGCTGAGGGCAGGAGGGAGGAGTGGGCCAGGGAAACAGGCTTGCTGAGAATTCCGCCCCTTCCCTGTCTGCTGAGGCAGCGTGCACACCCAGCAGGTGCCTCCTGCCTGAGGATGGCCTCTTTCTGACCCTTTGTGCTCTCTGCACTTGGGCAGCCTGCTGGCTAGAGCTTCTGGCATCTCTGCTGTGCACAGGCGCTCTGGTCGCTTCTAGAACTGTCCCACCCAGTGCTCCTAACATCCTTTCAGATTCCAGTTCATGGGGGCAGATGAGGCCACCAGCCACATCTCAGGTCCAGGGCTGCGGATGTGATCCACTGGCTGGGCCAGGCCGCTCACCACACACTGAAGTCAGCTCATGGACCTTCCTGTCTCCCCTCCCCAAATTCAACCTGTCTTCAAAACTGTGTTTATGGGAGGGAATTCAACAGAGTTGTGTCAGGATGCAGGAAAAATGGTTCCTGCTGCTGCTTCAGCTGTGTCACCAGAAGGCAGTCACCCCGTGTGGCTCTGTCCGCTCCACCTGTCTTGGCCTCAGACTCGGGGCTCAGCTACACCACGAGAGGCCATACCCAGCCTCAGCCTTAGCTTCTTCCCACCCCAGGCTGGGCTTGGGGGCCCCATTCCAGAACGGGAGTACAGACAGGG EMBV3_41090 ACACTGACCACGCACAGGCTGACACCGCCGTGGATTCCGATCTGGATCTGAAGGAGCTTT Gene GeneID:100336725|LOC100336725:XM_002688016:181_cdna Constitutive 0 NULL GeneID:100336725 5 GENE LOC100336725 NULL cadherin EGF LAG seven-pass G-type receptor 1-like EMBV3_09187 AGGGAACAGTCCAGCTCAGGAGGGTGCCTACCTCTCATTCTGCTCTCTGTAAAATACCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07910 TCCGCAAGGCTCCATGGGGGTTTCAGAAGACTAGAAGAGGTGGTGAAGGAATTCAGCAGA Gene BVV0102_064326 + 0 NULL GK000009.2:67962190-68514598 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23474 GTGGCGGGTCCAGTCATCCCTGTTGGCCCGGTTTTGGGAACTCGGCACCTTCAAAGGAGG Variant GeneID:515122|ABHD14A:XM_002697067:571_cdna 172^505 3 EMBV3_25625 GeneID:515122 22 GENE ABHD14A NULL abhydrolase domain containing 14A EMBV3_29328 TGCAGGAGGAGTGGAGGTGCTGATGAAGATGGGAGGCCAGGATTGTGCTGTCTCCAAGAA Gene BVT0102_104279 - 1 EMBV3_37633 GK000021.2:6450134-6514359 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120428 TCONS_00120429 TCONS_00120430 1 XLOC_073169 NonCoding TCONS_00120429 XLOC_073169 NonCoding NonCoding - 21:6453039-6454607 - TSS89949 973 2 TCONS_00120429_2 95 0.561151079136691 2 0.380344607530313 0.000377081660552291 3.41632559572504e-11 0.000342501607437068 2.72104916244607e-08 0.000894713281483782 4.89622673412372e-06 1.62359600071261e-61 0.000133734453128563 8.10850915845272e-06 0 0 0 0.000235911940468952 4.83425750063741e-06 0 0 0 0 0.000141705914237183 2.36157655879164e-13 2.79506973596842e-10 0 0 0 1.20813011791071e-16 0.000213281049116578 5.82441653133131e-10 0 0 0 XM_583188.7 LOC506707 PREDICTED: Bos taurus zona pellucida sperm-binding protein 3 receptor-like (LOC506707), mRNA. 3e-26 123 91.11 0.0904419321685509 0 noncoding 1 1 1 1 -0.0343794624084956 0.760117815696513 0.00831295687166385 0.903663790743661 TATTCTTGCCTGGAGACTCCCATGGACAGAGGAGCCTGGTGGGCTACAATCTATGGGGTCGCAAGAGTCCACACAGCTGAGCGACTAAAGAGAGCGAGAGAGAGGAGGTAACCTTTCTCAGCAGAGACAGCTGGAGGGAGACCACCAGGGGAAGGGGCTGTCCTGTACCTTCCAGGGGCTGTGCACCAAGTCAGCACTGCAATGGGGGACACCCAGCGATGCTCACCTAAGCCACACGGCCAGGACACGTTTTCCTCGGCAACGTGTTAACCCCAGCACAGCCTGCTTCTCCCCTCCCCGTGGCTTTCTTGGAGACAGCACAATCCTGGCCTCCCATCTTCATCAGCACCTCCACTCCTCCTGCACGCTTCCCTCCCAGCTTCTAGCTGTGGCTCGTCTGCCTCCCAAGGTTGCTTTCTGCTGGCTCAGCAACCATGGTCCAGCTCTGCTCTAGGCAAGGCCCGGAACTTCTCCACCAGGGGTGGGAGCTAGGCTGGGACCTGGGACCCTCTACTGGAGTGCTTGCACTTGCACATAGATGTCTCTTCCATCTATATTCCAGCACTGGAAAACCGAGAAGCTACAAGGGACTCAAAATAACTGTATACAGTATTTTCAGAGGCTTCCTGGCTGGTTCACTGGTTGAGAGTTCGCCTGCCAATGCAGGGGACACGGATTCAATCCCTGGTCCAGGAAGATCCTACATGCCTCAGGGCAACTGAGCCTGGGCACCACAATAAGAAAAGTCCCCAGGATGAGAAGCCCACCTACTACAGCCTGACAGAGTCCACACACAGCAACGAAGCCCCAGCACAGCCAAAAATAAACAAACCGGTTAATTTAAAAATATTTTCAAATTTTTGTTTGTAATTTTTGAACCTGGGTTATTTATAACTATAGTCTTTAATTTCTAGGCAGCTGGACATTTTCTAATATACTATAGTTACTGTTTTCTATGAACAAGAACATACTC TCONS_00118600 TCONS_00118601 TCONS_00118602 TCONS_00118603 TCONS_00118604 TCONS_00118606 TCONS_00118607 r 3' 31705 TCONS_00118600 TCONS_00118601 TCONS_00118602 TCONS_00118603 TCONS_00118604 TCONS_00118606 TCONS_00118607 r 3' 32067 EMBV3_31902 GGGCTGTGACCAGAGACACACAGAAGAGACAATGCTTCCAAAAGCCCATCATTCAAACCC Gene BVT0102_108318 - 1 EMBV3_32801 GK000023.2:45372317-45480545 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37639 AAATGACTTATTACAGCATGTGTAAATTATACTAGGATACTTGAAGCTTCAGGATTATGA Gene GeneID:513193|PLSCR1:NM_001034436:32_cdna Constitutive 2 NULL GeneID:513193 1 GENE PLSCR1 MGC128844 PLSCR2 phospholipid scramblase 1 EMBV3_17239 GAAGGGGAGCTCTTGGATGATACTTTCTGTGAGGTTTTGGTCATAGGGGAGCCACTGGGA Gene GeneID:534582|NFE2L1:NM_001102515:144_cdna Constitutive 2 NULL GeneID:534582 19 GENE NFE2L1 MGC143343 NRF1 nuclear factor (erythroid-derived 2)-like 1 EMBV3_15198 ACAATAACCATGAAACCACCCCTTCCTCTTCTCCTCATCCCTCGAAGGGTCCTCAGGTGC Gene BVT0102_115943 - 1 EMBV3_22914 GK000017.2:73036952-73113526 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17209 ACCAGAAGCTGAAGGATGAAGAGGTTGCCCAACTCAAGAAAAGTGCAGATACCCTCTGGG Gene GeneID:613595|LOC613595:XR_084629:155_cdna Constitutive 0 NULL GeneID:613595 1 PSEUDO LOC613595 NULL similar to Lactate dehydrogenase B EMBV3_10931 GGAACCCCTGGTACCTGTGAACCTATCTGCCATGTTGTAAGCCCCATTGGTATTGATTTC Gene BVV0102_157585 - 0 NULL GK000020.2:17915210-18182179 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36934 AGTGTTTAGCTAAAAGCATGAATGTGACACTGTAACCAACTCCTAATGATAACATGTGAC Gene GeneID:538594|CREBZF:NM_001099088:32_cdna Constitutive 2 NULL GeneID:538594 29 GENE CREBZF MGC155163 CREB/ATF bZIP transcription factor EMBV3_34410 GGTACACCCCTCCAAAGGAAGATGGCTAAATGTGTTGACTTTTGTATGCTTGGACCAGTG Gene GeneID:511631|UBE2Q2:NM_001075530:64_cdna Constitutive 0 NULL GeneID:511631 21 GENE UBE2Q2 NULL ubiquitin-conjugating enzyme E2Q family member 2 EMBV3_01313 TCCCCGGCCTCCCTGGCTCCCCGGCTGATGTGGTTTCATTTGAAGAAATAAAGAAGTATA Gene GeneID:100137749|COL19A1:XM_002690001:13_cdna Constitutive 0 NULL GeneID:100137749 9 GENE COL19A1 NULL collagen, type XIX, alpha 1 EMBV3_04215 GATGCAGATGAGAGAGCGCGAGCTAAAGTAAAATATCTAACAGGTGAAAAAGGTGTGAGG Gene GeneID:534075|EGLN1:XM_002698782:132_cdna Constitutive 1 NULL GeneID:534075 28 GENE EGLN1 NULL egl nine homolog 1 (C. elegans) EMBV3_07010 ACCATTACTATTATGATCTTATCACAGGAGGCAACAGGGAAGACTGTGTGGATAGAAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29702 CTGCCAGATACCTCTTCTACTAAGCCTACCCCAGTGAATGCAGTCCTTGTTTTATACCAG Gene BVV0102_011504 + 0 NULL GK000005.2:76013958-76033362 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35479 CATGTGAGATATCTTGGGAATTAGCACTGGGGTTTCAACAATGAAGAATAAAAGGCCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02970 CAGCTCTGTGGTCTGCTGGTTCTGGTGTCCTGGATGATGAGTGCCCTGAATTCCTTGTTA Gene GeneID:100298773|LOC100298773:XM_002688717:11_cdna Constitutive 0 NULL GeneID:100298773 7 GENE LOC100298773 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_20823 CATTCGGTTGAGACCATATGCATTTTCTGTGCTGTTTGTACTTGAGGTATGTAACATTTG Gene BVV0101_026229 + 1 EMBV3_32628 GK000011.2:3056125-3081933 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026674 TCONS_00026673 TCONS_00026670 TCONS_00026677 TCONS_00026671 TCONS_00026676 TCONS_00026675 TCONS_00026669 TCONS_00026672 1 XLOC_015092 Coding TCONS_00026677 XLOC_015092 Coding Coding TMEM131 11:3081424-3265589 = TSS19092 6396 1 TCONS_00026677_5 1876 41 0.965492713016659 0.000899419322749775 0.000163608450276225 0.000421041300080227 0.000616984961679622 7.78486370841898e-13 0.000303425711918653 0.000294416047395073 0.000792557875553227 0.000573348514041712 0.000312968121740291 5.61913078149755e-05 8.83293016058151e-05 0.000192278766885807 0.000184734825214303 9.25671271742456e-05 0.00228478190618111 3.61270228187894e-09 0.000839032600947601 0.000889634195973261 0.0014397460681655 0.000767875925546224 0.000665274475576654 5.59214068288457e-06 0.000788171826314703 2.53645944980051e-43 0.00181454417947186 7.08060087400348e-10 0.000141144430048894 0.000153507760708047 0.000214319808838865 XM_613474.7 TMEM131 PREDICTED: Bos taurus transmembrane protein 131 (TMEM131), 0.0 1.152e+04 100.00 0.998905565978737 NM_015348.1 TMEM131 Homo sapiens transmembrane protein 131 (TMEM131), mRNA. 0.0 8331 88.85 0.998905565978737 TCONS_00026677_5 sp|Q92545|TM131_HUMAN TM131_HUMAN Transmembrane protein 131; 0.0 3350 91.66 0.999466950959488 1 coding 1 0 0 0 -0.186762623390143 0.286126468840392 0.00411138110058729 0.928842313124831 ATGGGGAAGCGGGCCGGAGGAGGAGCAGCGGGATCCGCCGCCGCTGCCTCCACGTCCGCCGTGGCCGGTCTGGAGCCCGCGGCCGGCCGCGGCGGGGGCCCGCGGAGCGCAGCCGCCGGCCTCCTGGGAGCGCTGCACCTGGTGATGACCCTCGTCGTGGCCGCGGCGCGGGCCGAGAAGGAAGCATTTATTCAGTCGGAGAGCATAATAGAAGTGCTGCGTTTTGATGATGGAGGGCTTCTACAGACTGAGACAACACTTGGACTCAGTTCATACCAACAGAAAAGTATATCTTTGTACCGGGGTAATTGCAGACCTATACGGTTTGAGCCACCAATGCTGGATTTCCATGAACAACCAGTTGGAATGCCAAAAATGGAAAAAGTTTACTTACATAATCCTAGTTCTGAAGAAACTATTACTTTAGTATCAATATCTGCTACCACATCACATTTTCACGCATCATTTTTTCAAAATAGGAAAATTCTTCCAGGAGGAAATACATCATTTGATGTAGTTTTTCTTGCAAGAGTAGTGGGAAATGTAGAAAATACTTTATTTATTAATACATCTAATCATGGGGTATTCACTTACCAGGTATTTGGTGTTGGAGTTCCAAATCCATACCGATTGAGGCCATTCCTTGGGGCCAGAGTCCCTGTGAATAGCAGTTTCTCACCCATAATAAACATACACAATCCTCACAGCGAGCCTTTACAGGTTGTAGAAATGTACTCTAGTGGAGGAGACCTTCACCTTGAACTTCCCACAGGGCAGCAGGGAGGCACCAGGAAGCTGTGGGAAATTCCTCCTTATGAAACCAAGGGAGTGATGAGAGCCAGTTTTTCATCTAGAGAAGCAGATAATCACACAGCTTTCATAAGAATAAAGACAAATGCTTCAGACAGCACGGAGTTTATCATCCTTCCGGTTGAAGTGGAAGTCACAACAGCTCCTGGAATTTATTCCTCAACTGAAATGTTAGATTTTGGCACACTGCGAACACAAGATCTACCAAAAGTTTTAAATCTTCATTTATTAAATTCAGGAACAAAAGATGTACCAATAACAAGTGTTCGACCTACACCACAAAATGATGCTGTCACTGTACACTTTAAACCAATTACATTAAAAGCTTCAGAAAGTAAATATACCAAGGTAGCAAGTATTAGTTTTGATGCATCAAAGGCGAAAAAACCATCTCAGTTTTCTGGGAAAATAACTGTGAAAGCAAAGGAAAAGAGTTATTCTAAACTTGAAATACCATATCAAGCAGAGGTTTTAGATGGTTATTTGGGATTTGATCACGCTGCAACATTATTTCACATTCGAGACAGTCCTGCTGATCCTGTGGAAAGGCCAATTTACCTTACTAACACTTTCAGCTTTGCGATCCTCATTCATGATGTGTTGCTACCAGAAGAAGCCAAAACAATGTTTAAAGTTCACAACTTCAGCAAACCAGTCTTAATTCTACCAAATGGATCAGGCTACATTTTTACTCTATTTTTTATGCCATCCACATCGTCCATGCACATAGATAACAATATTTTACTTATTACCAATGCCTCTAAGTTTCACTTACCTGTGCGGGTATATACAGGCTTTTTAGATTACTTTGTATTACCCCCCAAAATAGAAGAACGTTTCATAGATTTTGGTATACTGAGTGCAACAGAAGCAAGTAATATTTTATTTGCCATTATAAACAGCAATCCAATTGAGTTGGCTATAAAAAGCTGGCATATTATAGGAGATGGTTTATCAATAGAACTCGTAGCTACTGAAAGAGGCAATAGAACTACAATCATCTCAAGCCTTCCAGAGTTTGAAAAATCCTCTCTATCAGACCAGTCATCGGTAATACTAGCTTCAGGATACTTTGCAGTGTTCAGAGTCAAACTTACTGCAAAAAAACTGGAAGGAATTCATGATGGGGCTATACAGATCACGACAGACTATGAGATCCTAACAATTCCTGTGAAGGCTGTGATCGCAGTGGGTTCTTTGACTTGCTTCCCAAAGCACATGGTTCTTCCACCTTCCTTTCCAGGGAAAATAGTTCATCAGAGTTTAAATATTATGAATTCCTTCTCACAGAAGGTAAAGATCCAACAGATACGATCTTTGTCAGAAGACGTGCGTTTTTACTACAAACGATTGCGGGGTAATAAGGAAGACTTGGAGCCAGGGAAAAAATCAAAGATTGCAAACATTTACTTTGATCCTGGATTGCAGTGCGGGGATCATTGCTATGTCGGCTTGCCTTTTCTGTCCAAATCTGAACCCAGAGTCCAGCCTGGCATAGCCATGCAGGAAGATGCCTGGGACACCGACTGGGATTTGCATCAAAGCCTATTCAAGGGATGGATGGGAATAAAGGAAAACTCAGGTCACAAATTGAGCGCTATGTTTGAAGTGAATACAGACCTTCAGAAAAACATCCTGTCAAAAGTTTCTGCCGAGCTCTCCTGGCCATCCCTCCTCAGCTCCCCCCGGCTCGTGAGGTTTCCCCTCACTAATACAAACTGCTCTTCAGAAGAAGAGATTATGTTAGAAAACCCTGCAGATGTTCCCATCTATATTCAATTTATCCCCCTGGCTTTATATTCCAGCCCTTCCATCTTTGTAGATAAGTTAATATCAAGGTTTAACTTAAGTAAGGTGGCAAAGATCGATTTAAGAACACAAGAATTCCAAGTCTTTAGAAACACTGCTCACCCACTGCAGAGTTCAACAGGATTCACAGAGGGCCTCTCCCGACATTTAGTTTTAAACTTAATTTTAAAACCTGGAGAAAAGAAATCTGTCAAAGTAAAGTTTACTCCAGTTCACAATAGAACTGTTTCTTCCCTAATCATAATCAGAAATAACCTGACTGTGATGGATGCCGTAATGGTCCAAGGACAGGGGACAACCGAGAACCTGAGGGTGGCAGGCAAGCTTCCGGGCCCAGGGAGCTCCTTACGCTTCAAAATCACAGAAGCACTGCTGAAAGACTGTACGGAGGGTATGAGACTAAGGGAACCCAATTTCACATTGAAAAGAACATTTAAAGTAGAGAACACAGGACAACTTCCAATTCACATAGAAACCATTGAAGTCAGTGGGTACTCTTGTGAGGGATATGGCTTTAAAGTCGTCAATTGTCAAGAGTTTGCACTGAGCGCCAATGCCTCTAAAGACATAGTCATTCTGTTTACTCCTGATTTCACGGCTTCTAGAGTCATCCGTGAACTGAAGTTTATAACAGCCAGTGGCTCTGAGTTTGTGTTTGTATTGAATGCATCCCTTCCTTACCATATGTTAGCAACCTGTGCAGAAGCCCTGCCCAGGCCCAACTGGGAGCTGGCTCTGTACATCATCATCTCAGGAATAATGAGTGCGCTGTTTCTCTTGGTAATTGGAACAGCCTATTTAGAAGCTCAAGGAATTTGGGAGCCCTTCCGAAGGCGGCTGTCCTTTGAGGCCTCGAACCCGCCCTTTGATGTGGGGAGACCATTTGATCTCAGGAGAATCGTTGGTATTTCATCTGAAGGAAACTTGAACACACTCAGCTGTGACCCCGGTCACAGTCGGGGCTTCTGTGGAGCAGGTGGCTCGGCCTCCCGGCCCGGCGCAGGGAGTCACAAGCAGTGTAGCCCGTCGGTCCACCCGCACAGCAGTCACAGCAATAGAAACTCGGCTGACGTGGAAAACGTCAGAGCCAAAAACAGTGCGAGTGCCTCTGGCAGGACTAATGCCCAGTCGGCGAGCAAAGCCAGCCCACTGGTCTTCGAGTCCCACAGCATGGCCCAGGGTCACACCGCAGGCCGGAAGTCCAAGGGGGCCAGACAGGGCCAGCACAGCAGCCAGCACCATGGCCACAGCCCCCTGGAACAGCACTCGCCCCCGCCGCCGCCGCCAGTGCCTCAGCAGCAGGAGCCACAGCCCGAGAGGCTGTCCCCTGCGCCCCTCGCACCCCCGCCCCACCCAGAGCACCCCGGCAGCACCCGGCACAGCTCCGAGGACTCAGACATCACCAGTCTCATCGAAGCCATGGACAAAGACTTCGAGCACCACGACGCCCCGCCCCTAGATGTGTTTACAGAGCAGCCGCCTTCACCCTTGTCGAAAAGCAAAGGGAAAGGAAAGCCTCCTCAGCGCAAGGTGAAGCCCCCCAAGAAGCAGGAGGAGAAGGAGAAGAAGGGAAAGGGGAGGGCCCTGGAAGACGAGCTGAAGGACTCCTTGGCTGACGACGACAGCTCCTCCACCACCACAGAGACCTCCAACCCAGACACAGAGCCTCTCCTCAAGGAGGATACAGAAAAGCAAAAGGGAAAACAAGCCATGCCTGAAAAACATGAAAACGAAATGTCTCAAGTGAAACAAAAAAGCAAAAAAGTCTTAAATGTTAAGAAAGAAATCCCAGCAGATGTGAAACCCAGTTGCTTAGAGCTACCGTATACTGCCCCCTTGGAAAGCAAACAGCGCCGAAATCTCCCAACCAAGATTCCTCTTCCAACTACACTGACCAGTGGATCCAAACCACGAAACTCCCAGAAAACAAAAGGTACAAGTAAGTTAGTGGATAGCAGGCCACCTGCCCTCGCAAAGTTTCTCCCAAACAGTCAAGAACTAGGCAACACCAGCAGCTCAGAAGGTGAAAAAGACTCTCCACCACCAGAGTGGGATTCCGTGCCTGTTCACAAGCCCGGCAGCTCTACAGATAGTCTTTATAAACTCTCTCTGCAAACCCTCAACGCAGACATCTTCCTGAAACAACGCCAGACCTCGCCGCCGCCCACCTCCCCCTCACCGCCCGCCGCACCCTGCCCGTTCACGTCCCGGGGCAGCTACAGCAGCATCGTCCATGGCAGCCCGGGCAGCGACTCTAAAGCAAAGCAGCCAAGCGGGAGCAAACACAAACTGACAAAAGCCGCTTCTCTCCCGGGCAAGAATGGCAACCCCACTTTCGCTGCGGTCACGGCTGGGTATGACAAGAGCCCAGGTGGGAACGGCTTTGCCAAAGTTTCTTCAAGCAAAACAGATTTCTCTAGCAGCCTTGGCATTTCACACACTCCTGTTGACAGCGATGGCTCAGACAGCTCGGGTCTGTGGAGCCCCGTGAGCAACCCCAGCAGCCCTGACTTCACACCCCTCAACTCGTTCTCAGCCTTTGGGAATTCTTTTAACCTAACTGGTGAAGTGTTCAGCAAGCTCGGGTTATCGCGATCATGCAATCAGCCCTCACAGAGGAGCTGGAATGAGCTGAGCAGCGGCCCCTCCTACCTCTGGGACTCGCCGGCCACAGAGCCCAGCCCTTCCTGGCCAGCCAGTTCCAGCTCCCCGACCCACACGGCCACACCCATCCTTGGCAGCACCAGCAGCCTGTGGTCGTCCACTCCGTTCAGCAGCTCCATCTGGTCCAGCAGCCTGCACAGCACCCTGCCCTTCACCAGCCCCACCAGCGCGTTGCCGAGCATCAGCCTCATGGGCCCCGAGAGCGCCCCGGCAGCTCACGCGCCCTCTGCCGCCAGCCCCTCCGACGACCTGGGCCAGACCTACAACCCCTGGCGGATATGGAGTCCCACCATCGGACGGAGGAGCTCAGACCCCTGGTCGAATTCGCACTTCCCTCACGAGAATTGAAATTAGGCAAAAAAAGAAATAAAACGGTGGTGGCCCCTGGTCTAGACCGTGACGTGCCCGTTTCCGAGACATCTTGAAGGCTCTCCCCGCTGTTGCTGCCCACTCCTCACCCTCCTCATCTCTGCAGGGCAGGCTTACACCACTCGCTTCTTTCAGATCTTTCTTGCAATTATGATAATACGAGATTTGCTGTTGTGCTTTTAGAGAAAAGTCTGGACTCAGCCACAAACTCCAGTAAGACCTGTACATCTGAAAACCTTACCTGTTATCAGCTGCCCACCACCTGTCTTCTCCCACCTTATCTGTCTGTGTGAACACCAATTTGATATTACAGCAAGGTGACAACTCAAGTTGATTTCAGAAGTCCTGGCATGTGACAATTTTATTAAATTACCAAGGTTGGTTTTTTAATAATTTCACAATATTATACGCCAAGATCTAATTTTAAAAATGTATGAGGACTTTGTGCTGAAAATACAGAGTATTTTTTTAAAATAAGGCTGTCTCGGTTTAAAAGCAGATTACAGAAATGTTAAGTCAACTTTAAGAACAGTGAATGAATGTTAAAACATTCGGTTGAGACCATATGCATTTTCTGTGCTGTTTGTACTTGAGGTATGTAACATTTGTATACCTGAATTTATTTTCAAGATAAACTGAAATGCACATCGCCAAGTCTTGAGATACAAGATTGAAGGTGTATTTCTTAAAAATACAACTTTATGTTGTACTTTGAAATAAATGATGCTTTTTTCAAAAGCCTTG EMBV3_34127 GAAGTTGCTAGCAGAGCCTCAGGAACTGCGGGTCAGCAGCCTGAGTGCTGTGTGGATGCG Variant GeneID:509263|LOC509263:NM_001031755:85_cdna 188^321 3 EMBV3_33949 GeneID:509263 16 GENE LOC509263 FLJ20584 hypothetical protein LOC509263 EMBV3_13928 GCAGGTGTTTGACTTTGAACTGACTCCGGAAGATATGAAAGCAATCGATGGCCTCAATCG Gene GeneID:782922|LOC782922:NM_001166224:47_cdna Constitutive 0 NULL GeneID:782922 13 GENE LOC782922 NULL similar to prostaglandin F synthetase II EMBV3_13481 CTGAAATGAGTTATCTGTCACACGTCCCCAGTTTGTTCACTGCCCTGTGATCTTCTGCCC Gene GeneID:617922|MYADML2:NM_001076948:138_cdna UTR3_Alt 1 NULL GeneID:617922 19 GENE MYADML2 NULL myeloid-associated differentiation marker-like 2 EMBV3_40837 ACAGCCGCACCCAACGTGTGCTTGTGTTTCACTGGGGTATTTACGTACAAATGCATGTCT Gene GeneID:513942|ZFP1:XM_002694710:154_cdna Constitutive 0 NULL GeneID:513942 18 GENE ZFP1 NULL zinc finger protein 1 homolog (mouse) EMBV3_09739 AGACTTCAGCCGCCTCAGACGCTACTTTGTGGCATTCGATGGGGACCTGGTACGGGAATT Gene BVT0102_060776 + 0 NULL GK000019.2:15402601-15406340 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095342 TCONS_00095341 TCONS_00095340 TCONS_00095343 TCONS_00095344 1 XLOC_057694 Coding TCONS_00095344 XLOC_057694 Coding Coding LIG3 19:15404440-15425868 j TSS71112 3892 1 TCONS_00095344_6 1002 20 0.819293414850422 0.00698801932156637 0.00140326737324862 0.00237648708197392 0.00193936063064082 8.71052886514999e-07 0.000287852477166477 0.00246749388641413 3.6851288509942e-07 0.00142892145331138 2.81864373854648e-08 2.64443605157728e-09 1.36732059170161e-07 0.000929123900819182 2.60090418284077e-05 6.8938283100423e-05 0.00565278823140007 0.000156617083570451 0.00516871981239003 0.00582279162167759 0.0061784064974832 0.000420182722340994 0.00204449205535313 0.00255725114864053 0.00242205913028012 0.00703206550234406 0.00254728730156661 0.00233367173791738 0.000589566804437072 1.99291818529675e-07 0.00149934335987673 XM_005220003.1 LIG3 PREDICTED: Bos taurus ligase III, DNA, ATP-dependent (LIG3), 0.0 7019 100.00 0.999743062692703 NM_013975.3 LIG3 Homo sapiens ligase III, DNA, ATP-dependent (LIG3), transcript 0.0 4024 83.97 0.931140801644399 TCONS_00095344_6 sp|P49916|DNLI3_HUMAN DNLI3_HUMAN DNA ligase 3; 0.0 1832 87.70 0.999001996007984 4 coding 0 0 0 0 0.0720797196080651 0.667511336436884 -0.0516488580960198 0.285686445839102 CAGCTCGAGGACCCGGATTTAAAGAGACAGGCACGACAACCGTCTTGGCTGCGCGCGGCATGTGGGCGCCTGGTCCGAGGCCTGAGGTGGCGCCGGAGCCGGGAAGGCAGCTGTATGACTTTGGCTTTTAAGATCCTCTTCCCACCAACTCTCCGTGTACTCAGGAAAAAAGAACTGTGCCTATTCCGAGAACATCGCCGGCCTGACATAAGACACTTTGGCCGGTGGTCAGAGACAGTTTTTTGTGGATACCACCTCCTCCAGAGAAGAAAGCCTGTTCCGTCCTTCCAGGAAAGCAACCTAAAACTACGTGCCACCTGCCTTGTTTACTTGCCAGGGTCGCATGTGGGACTCTGCAGTGGCCCCTGTGAGATGGCAGAGCAACGCTTCTGTGTGGACTACGCCAAGCGTGGCACGGCTGGCTGCAAAAAATGCAAGGAAAAGATTGTCAAGGGCGTATGCCGAATCGGCAAAGTGGTGCCCAATCCCTTTTCAGAGTCGGGGGGCGATATGAAAGAGTGGTACCACATTAAATGCATGTTTGAGAAACTGGAGCGGGCCCGGGCCACCACAAAAAAAATTGAGGACCTCACCGAGCTGGAAGGCTGGGAAGAGCTGGAAGAGAATGAGAAAGAGCAGATAAGTCAGCACATTGCAGATCTGTCTTCCAAGGCAACAAGCACACCAAAGAAGAAAGCTGTTGTCCAGGCGAAGTTGACAGCCACTGGCCAGGTCGCATCTCCAGTGAAAGGTGCCTCATTTGTCACCAATTCCAATCCCCGGAAGTTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGCCCACTCCAGCCCTACCCCTAAGACCCCTAAGACAAGTCTGTCCTCAAGCAAATGTGACCCGAAACACAAGGATTGTCTGCTGCGTGAGTTTCGGAAGTTGTGTGCCATGGTGGCTGAAAATCCTAGCTACAACACGAAAACCCAGATCATCCAGGACTTCCTTCAGAAAGGCTCAGCAGGAGATGGTTTCCACGGTGACGTGTACCTAACAGTGAAGCTGCTGCTGCCGGGTGTTATTAAGAGTGTTTACAACTTGAATGATAAGCAGATTGTGAAGCTTTTCAGCCGCATTTTTAACTGCAACTCAGATGACATGACACGAGACCTAGAGCAGGGTGACGTGTCAGAGACAATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCCTCCAGCTGCCAAGAGCCTCCTTACCATCCAGGAGGTGGACGAATTCCTCCTGCGGCTCTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTGCAGGATATCGCCTCCAGGTGTACAGCCAATGACCTTAAGTGCATCATCAGGCTGATCAAGCATGACCTGAAGATGAACTCAGGGGCAAAACACGTGCTAGATGCGCTAGACCCCAATGCCTATGAAGCCTTCAAAGCCTCACGCAACCTGCAGGATGTGGTGGAGCGGGTCCTCCGCAACGAGCAGGAGGTGGAGAAGGAGCCAGGCCAGAGACGAGCTCTGAGTGTCCAGGCCTCTCTGATGACCCCAGTGCAGCCCATGCTGGCTGAGGCCTGCAAGTCCATCGAGTATGCCATGAAGAAGTGTCCAAACGGCATGTTCTCTGAGATCAAGTATGACGGGGAGCGAGTCCAGGTGCATAAGAAGGGGGACCACTTCAGCTACTTCAGCCGCAGTCTCAAGCCCGTCCTGCCACACAAGGTGGCCCACTTTAAGGACTTCATCCCCCGGGCTTTCCCTGGGGGCCACAGCATGATCTTGGACTCTGAGGTGCTCCTGATCGACAACAGGACAGGCAAACCACTGCCCTTTGGGACCCTGGGAGTGCACAAGAAAGCTGCCTTCCAGGATGCCAATGTCTGCCTGTTTGTTTTTGATTGTATCTACTTCAATGATGTCAGCTTGATGGATAGGCCTCTGTGTGAGCGGCGGAAGCTTCTTCATGACAACATGGTGGAGATTCCCAACCGGATCATGTTCTCAGAAATGAAACAAGTCACAAAAGCTTCCGACTTGGTGGACATGATCAACAGGGTGATCCAAGAGGGGCTGGAAGGGCTGGTGCTGAAGGACGTGAAGGGTACATATGAGCCTGGAAAGCGTCATTGGCTGAAAGTGAAGAAAGACTATTTGAACGAGGGTGCCATGGCCGACACAGCTGACCTGGTGGTGCTTGGGGCCTTCTACGGGCAAGGGAGCAAAGGTGGCATGATGTCCATCTTCCTCATGGGCTGCTATGACCCGAGCAGCCAGAAGTGGTGCACCGTCACCAAGTGTGCAGGAGGCCACGACGACGCGACGCTCGCCCGCCTGCAGACGGAACTGGACATGGTGAAGATCAGCAAGGATCCCAGCAAGATACCCAACTGGCTGAAAATCAATAAGATCTACTACCCTGACTTCATCGTTCCAGACCCAAAGAAAGCTGCCGTGTGGGAGATCACAGGGGCTGAATTCTCGAAATCTGAGGCTCACACAGCTGATGGGATCTCCATCCGATTCCCTCGCTGCACCCGAATCCGTGATGATAAGGACTGGAAGTCCGCCACGACCCTCCCCCAACTCAAGGAGCTGTACCAGCTGTCCAAGGAGCGCGCGGCCTTCGCCATAACGGCCGGAGACGAGGGGAGCTCCGCCACAGGGGGCAGCAGTGGGGAGAACGAGGGCACCTCAGGGCCGGCTGTGCCTCACAAGGCCCCAAGAGCCTCCCCCAAGCAGCCTCCCACCAGCGCCAAGAAGGCTGGGGGCAAGCCGGGCGGCTGCACCAGCAGAGGTGGCAACCTGCCAGCTGCAGAGCCCTCCCCTGTGAGAGCGGGAGTGAAACGGAAGGCTCCTGATGTGACCCCGTGCCAAGCCAAGGTGCTGCTGGACATCTTCACTGGAGTGCGGCTCTACCTGCCGCCCTCCACGCCAGACTTCAGCCGCCTCAGACGCTACTTTGTGGCATTCGATGGGGACCTGGTACAGGAATTTGACGTGGGCTCAGCCACACATGTGCTGGGTGGCGGGGACAGGAACCCCGAGGCCCAGCAGGTCTCCCCCGAGTGGATTTGGGCGTGTATCCGGAAACGGAGGCTGGTGGCTCCTTGCTAGGACTGCCGCCTGCCCCTCCCTCGCGTGTACTCCCGGCCGCACTGCTTCGGGGCGGGCGGGTGGCCGGTTGAACCCAGGGTGGGGGCCGCTGTCTTCTCCAAGCTATGCATCTTCCAGAGCCCACCAGCCCCGCCTACTGTCTTCCAGACTGGAGTGAGTTGCTGTGTGCCACCACTGAAGTCAGGTGCCAGTTTACATAGGTCTTTCAGATAGGGTGCTGGTTTTGACCTTTTTTTTCCCTATGAAAAGCTTTTTTTAAAAAAAAAAAAAATGGAACCCTCTCAGAGTTATCTGTGTCCTTCCCCAAACACCTCCTATAATTCTAGTGATTAAGGAATGGAGGGGAGGCTGGCTGTTAAAGTTCCCCTTCTACTTCCAGCTCCTTTTAAAGTTGTATTTAAAAGAGTATCCTCAGAAATGCTTATAGTGGGCAAAACTTGTATTCCGCCTGGCCATTTTTGCCAGGAATGAAATTGTATCTGAAAGAAAACAAAATGGATTTTTATGTCTCACTTCTCCGTGTTCTCCTATTAAACAGTGTGTGGGTCCTGTTTTGAAGGGAGGGGACCAGGAAGGAAGGACAGGGAGGTGGTGTGGGCTCCGGGGCCACGGGCTCAGGAGGAGCTGCCCCTACCCCACCTGCAAACAAGACCAAAAAGCTCTTTAGAAACCCACCTGAGGACAGATCTCCACAGCCTGCTTACAGAGAATGGCTCCTGTGCCACTTGAGGTGGATTTATTTGAATAAAGAGAAAACAATTGAGCATAG EMBV3_43372 TGTGAGCTCTACTTGAATTGTGCCCCAAACTCTGGTGATTCAGGGGCAGGTATCCTGTAG Gene BVT0102_095077 + 0 NULL GK000010.2:57938672-57953225 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00014158 TCONS_00014154 TCONS_00014156 TCONS_00014157 1 XLOC_008253 Coding TCONS_00014157 XLOC_008253 Coding Coding ARPP19 10:57923328-57941203 j TSS10315 4449 1 TCONS_00014157_1 112 0.0238255787817487 4 0.751314758867629 0.000272955936551946 0.000776567476454903 0.00043829215753962 0.000216814227261394 5.38975776916013e-07 4.04690978701694e-05 0.000528506741176865 3.07379263810302e-06 0.000171236151847965 5.66043621732201e-07 0.000198892296127254 1.35686137659819e-10 3.83015860694171e-05 6.78081824413048e-05 1.49667853550601e-05 0.00630766702161743 0.00544936043251642 0.0043652050750822 0.000309092611982792 0.000472498750818083 0.00012980645778744 0.000935476220475717 0.00433542015190352 0 5.71504056591121e-05 0.000283536408258106 0.00017121237860986 0.000567948882941954 0.00039029105443046 3.33696537274447e-07 XM_005211788.1 ARPP19 PREDICTED: Bos taurus cAMP-regulated phosphoprotein, 19kDa (ARPP19), transcript variant X1, mRNA. 0.0 7903 100.00 0.984715666441897 NM_006628.4 ARPP19 Homo sapiens cAMP-regulated phosphoprotein, 19kDa (ARPP19), mRNA. 0.0 2022 89.01 0.348168127669139 TCONS_00014157_1 sp|Q28055|ARP19_BOVIN ARP19_BOVIN cAMP-regulated phosphoprotein 19; 5e-77 227 100.00 0.991071428571429 1 coding 1 1 1 1 -0.955841955682662 0.131796535862905 0.0326076599814064 0.571004616010816 AAGCCGTAGAGGGAGCAGTATGTCTGCGGAAGTCCCCGAGGCAGCCTCCGCGGAGGAGCAGAAGGAAATGGAAGATAAAGTGACTAGTCCAGAGAAAGCTGAAGAAGCAAAATTAAAAGCAAGGTATCCTCATCTGGGACAAAAGCCTGGAGGTTCCGATTTTTTAAGGAAACGATTGCAGAAAGGGCAAAAATATTTTGATTCTGGGGATTACAACATGGCTAAAGCAAAAATGAAGAACAAGCAACTTCCTACTGCAACCCCGGATAAGACAGAGGTCACTGGTGACCACATTCCCACTCCACAGGACCTTCCTCAACGGAAACCATCTCTTGTTGCTAGCAAACTGGCTGGCTGATTAAAAAGAGCTGAACTGCATGAATCTTCTAATGCCCATTATTTCTCCTTAATATGTTACTCCTCTGCTTTTTATTTCCTTTTACTCCCTGTGTCATTTGAGAGTGATGGCTTTGCAGGTAGCGGTAGTGTGTGCTGCTATTTTAAGGGAATATACATGTGTAGAGTTTTTGATTAGTTTAACAGTGCACTGATGAAAAGAACATGTTAGAGCAACATAAAGTAATCTACTTGAAAATAATTGTATATATTACCTAACTCCTAGTGTAGGGCTGGATCCAACAAGTAACTAACAAGTTTTGCAGTTTAAATGTTGGCTTTCTTTAATTCATCTTAATTATAGCTTTGTATGTTACTCTTATTTAATATAACCTCTACTGTTGGTTTCTTCTGGATTTTCCTTTTGGGTTTTGTAAACAGAAGTTTAAGACCACAAGTTAGAAGAGAGGTCACATATTTCAAACACAAATAAATGGGGCTCCAAAAGATTTGTATCCTGTGCTTGAACGTGAATGGCCTTAAATCTGTTTTGGCTTTAACAATAGAATTTTACTTGGGCAATATTTGCCCATTCTGGTGTAACTTATGTGACTCTATTGCTTAACAGCTGCTGTTGAAGGTAGTATTCTTATTCAGTTCTATAGTGTTCAGAATACCTTTTGTCATTGAAGATGTGAATGAAGTGTGCATGTGCATCGACTGTTGAATTCACTTTTGTGCCATTTTTGTAAATACAGTAGTTTTGCACAACCTCTCACAACTGTCTGTGTTACTTTCACATATTAAAGAGTAGAAATGTGCCAACCAGAAGCACAAGAGTTCCTACAAAAAACTCTGTATGTCATTAGAGCTTTTGTATAGTAAGAGTAGTTTATAGTCTTGGGGTTATAGAATACCAAACTGAAATCTTTGCTCAGTCTGCCGTAGACTTAAGCTTTTTCATTTGTTAGCAGTACCCATGACATTCAGTGGCCTTGTGCAAATATGGTATGTTGCTTAGGCATATCTTTTGTCCTAGGCAGAACGTTTCATTTTGACTTTTATGAAAATTACTGTTCATATAGTTTATATAAACTTTTTTAATGTAGAAACTTTTTACTTGCACAGTCAATTTAGGGGACACTAGAATAAAAGACTTTGCCTCTTGTGGCCCCTCCCTTCTTTTTTTTTGCTTCTTTGACTCACATTGTGTTGGGCTGTGCGATTCAGCCTGTTCAGAAACATAAGTATGTTCACTCTTGAAATTTGCTCTGCTGAGTGCTGTATTTTCTAACCCAATAATTACATTTTCCTTATAATTTCTCAGTTGTTAATTAACCACTCTTAATCCTGTGTTATTACTAACTGACAATTGTTTAAATAAAAGGAAATTTATAATAAAACAAGTATTTGAGAAGATTGGCCCAGGAATCTAGTCAGAATGAGCTGAATTTCAAGTAATAATAATAAGCTAAGTGAATTAGACTTGTGACAGAGCAATTTACGTGATAGGTGGAACAGATAATACATATTTAGATATTTTGCTTCTATAGATGTCATTTTAATAAAATGTAAATTAATTGTATGTGTGGTTTGTCTAGTTAGTAAGAACTTTAATTAACAGACTGCTGGGACAAATCTACTGCTCTTTTAAGAGCTCTTCCCCTAAGTTGTGACGCTGTAGCATGACGCAGAGGATCTGTAACCTGAGATGATAGTGCGTTTTTCTTCTTTGACTTGTGCAGGGCCTCCACCTCTTTTGAGTCCAGGCATCTTTTCTGGATCTTGGCTTCATTAGATACTTGATTTCCTTTGATCCCAAATCACCATAGATGGTGCGTTGAGCATAGCGCCTGCACCTAAAGGCTGCCCTGCACTCTGGGGAAAGCTGGCTGATTATCTTCCTGCTCCACCCACCCCAAAAGAAGAGAACAACAAAATCAGTAATGCACTAATTTGTTACTACAAGGATTGGTGGTTTTAGTTTTAGCCCCTAAAGAGTTGTGTCCAACTCTTGTGGCCCCATGGACTATAGCCTGTCAGGCTCCTCTGTCCATAGGATTTTCCAGGCAAGAGTACTAGAGTGGGTTGCCATTTCCTTCTTCAATTATAAGGTTTAGTTATACATAAATAGATTTGTAATGAGAGTAAGTAGGTTATTCAAAAGCATGTATAATCATTATAGGATTGATTTACGAATTACAAAATACCCGAAGTAGAATTTCTGTAATACCTAGTGGGGTTTGGGTTTTGTTTTTAATGACTACTTGCAAGCTGTCACTGTTAAATTCACACACATCAGATTAATCTGAAAAACCATGTTATTCTTGGTTATAGTAGGACTCCTGCTATGGTTTGCAATAAGTGATGTAATCTCTGCCTGAGTTTTAGTTTGTAAAATAAATACTAATATTAACCTACCTCAAAACTTGTTGAGGATCTGTGAAATACTGAGTAAGTGCCCAAAATAAAATATTGTTGTCTTTTTATTAAAAGTAAGTTTCCTCATTAAACCAGCCTGCCTTCTGTAAAGTCACAATGATTGAAATCTCAGGATTTTCCATCAGGAGAGACCGGTCATGTAGGACTTGTAGGTTTAAGTAATTGCTTAGTCTCCATTATTGGTGCTTGGGATAGAGGTCATACATTTTTATATTTCTGTTCTGCTTCTTAGCTCAGTTTATTGAAGGTATAGTTGCAGGCTGTTTCACCATTGCTTGAGTGAAGATTTTTGAATAAGATGGGCTTCATCAAACATTTCTATGGTTTCAGAATTGTGGTTTGAGAAATGACCAATTTAAATCATTGTCCTTATTGTAAATGTATGTTGGCATAAACAAGTTGGAGAAAAATACTTAAATGAAAACCAGCTAAAATAAATTACCTGTTTCATGTCCAGTAGCTCCTATTTGATAGTACAGTTCTTAGAAACATTTCATTTTTAAAGACTGTATCTGAGTAAAACAATTCTAGTTATTGGCATGTTGGGATAGAATTGTTGGATTGTTTGGATGAACTGGAAGGCGCATGTTTGCAGTCTCTTTACAAGTTACTCAATATTCTTGTGCTGCTCACTTAAAAAAACATCATTTTAACTGTTCATCAAGGCCTGTATTTGTTCTTACTTCACTTGGAATTTGTTCCTCATTTTATTTGATGTAACAGAACTATACCTCTACATGTTTATTGATACTTTTTACTAAATCAGACAGGTATTCTTTCTCAGTCCAAATTAGTGAAGTCTCATCAACACTGAAATGTGAGCTCTACTTGAATTGTGCCCCAAACTCTGGTGATTCAGGGGCAGGTATCCTGTAGGAAGGGCATGTCTGAGTGGCAACAAAGAGTTTCTCTGGTGGCCTTTCTATGTTTCCCCAACATTCAGACACATTTCTTCATTTTTCATTTTCCTTTTCCACCTCATTTTCCTTCACTTCTCCCCCGTTTCCATCCCTGCTTATCTCTTAAGCCCCCTGATGGCCTTCAGTAAATGATTTTTGATAAATTATCAGTCCTTTGATATTCTCCCCAATATACTGCAACTATAGACCCATTTAAAATTTTCTAAAACACTATCCTTATCTGGAAGTGACAGCTTTGAGCCACTGTCCTACTTCTGCAATTCAGCATGCACTGCCAGCCTTCCCCCATGTCCCTTCTCCCACCTTATCCCTTCTCCCCCTGACACACCACACCATACCTTGTAAAATTGGGATCAAAGAAGTTTCATTCTGAGATTGATAATCTAAGGATAAAAATGCTGATTTTAATAACTTTCACTAGTTCCTGCCTTTTAAAGTAGGTAGGCCTATGGGTTTTATTCTGGAAATCACTGATGGGTCACACCATTATGTTTGTATTATGTTATTTATCAACTAAACAGCATTTGAAAGAAAAATCCAATTTCTTTAATATGCCCTCAGATCTTTTACAGCATCTCTTATTTGTGATGCAATAGGACACTTGCCTGTATTAAAAGGGCCAAAAGTAAATGCCTTTTTTTGTTGAACATGTCTATAGAGTTGGCAGTTAATGCTGAAATTTGTCAAGTAGCCCTTCCAAAATTAAACTTGTAAAATACACAAAAAATAAATGTCTACCTAGTATCGATTT EMBV3_18745 TTCTCGCTGGATTCCTTACCCTGGTCTCTAGCGTTTAGTTCTTCCCTGTTCATCACTTTT Gene GeneID:540420|TINF2:NM_001098114:243_cdna UTR3_Alt 2 NULL GeneID:540420 10 GENE TINF2 NULL TERF1 (TRF1)-interacting nuclear factor 2 EMBV3_17485 TCTCTTCAGGCTAAACTAGAACGGCTACATTAATTATTGTAATGTATTTTCATCCCTGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19593 AGTGAGAGATTTCCTCTTCTTGGGCTCTAAAATCACTGCAGATGGTGACTGCCAGCCGTG Gene BVV0102_229378 - 1 EMBV3_38940 GK000009.2:21766488-22191723 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31698 TTGGCCTCCTCCTTAAGTACATTCTGGACAGCTGGAAGAAGCGAGACTTGGCCGAAGACA Gene GeneID:539080|IRGC:NM_001076146:349_cdna Constitutive 0 NULL GeneID:539080 18 GENE IRGC NULL immunity-related GTPase family, cinema EMBV3_23550 TGAACTAGTGCATGGTTATTTTACACAATAAGATCTGGAATTTTACGGAGGAAGTATGTT Gene GeneID:539227|RAB3GAP2:XM_002694004:311_cdna Constitutive 2 NULL GeneID:539227 16 GENE RAB3GAP2 NULL RAB3 GTPase activating protein subunit 2 (non-catalytic) EMBV3_39158 AGGCATTGGCTTTATCCTCTTTAGAGTTAGACTGTTGGGGTGGGTATAAAAGATGGGGTC Gene GeneID:286819|EIF4A2:NM_001034044:42_cdna Constitutive 0 NULL GeneID:286819 1 GENE EIF4A2 MGC128385 eukaryotic translation initiation factor 4A, isoform 2 EMBV3_08356 CAGCCTCGGTCTGAGTGGACTATCCTGCAGAAACTCCAAGTGAGGAAATTGATAATAGAA Variant GeneID:353350|SMC4:NM_001105326:106_cdna 96^239 1 EMBV3_22037 GeneID:353350 1 GENE SMC4 MGC140334 SMC4L1 structural maintenance of chromosomes 4 EMBV3_11614 CCCCCTTCCTCCATTTTCAGAACCTTCCTTCATTTTTAGTATTGGCCAGTTGAGTCCTCC Gene BVT0102_272836 - 1 EMBV3_02495 GK000015.2:38340231-38411893 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059009 1 XLOC_036246 Coding TCONS_00059009 XLOC_036246 Coding Coding LOC784945 15:38403290-38416002 j TSS44346 1732 1 TCONS_00059009_2 125 0.145496535796767 7 0.864290771772481 0.000107373155872164 0.000132449364401911 0.000704451672002922 0.000183831074578612 6.22985567171748e-39 1.9958782653237e-05 2.11041310784312e-05 8.44932390682776e-06 0 1.20331547441375e-05 5.16363184383377e-189 0 4.02426404602225e-73 4.14376753072297e-314 0 0 0 0 3.65952622694896e-13 0.000820493832481753 2.03236675114559e-05 0 0 0 7.2225828567187e-06 6.30081345923594e-05 2.28296932689079e-22 0 1.0548622744848e-11 0 XM_001253110.2 LOC784945 PREDICTED: Bos taurus calcitonin receptor-stimulating peptide 2-like (LOC784945), mRNA. 0.0 1065 100.00 0.340069284064665 XM_005253135.1 CALCB PREDICTED: Homo sapiens calcitonin-related polypeptide beta (CALCB), transcript variant X1, mRNA. 3e-54 217 71.63 0.241339491916859 TCONS_00059009_2 sp|P10092|CALCB_HUMAN CALCB_HUMAN Calcitonin gene-related peptide 2; 2e-31 112 50.86 0.896 1 coding 0 0 0 0 -0.0630717725112291 0.679895793136835 0.0465348794695771 0.444653516747244 GGGTGAGGTGATAGGAGGACTCAACTGGCCAATACTAAAAATGAAGGAAGGTTCTGAAAATGGAGGAAGGGGGCCTTGAGCCAAGGAACATGCTGGCCACTAGAAACAGGAAATGGAAAGGAAATTAATTCTTCTCTAGAACCTCCAGAAAGGACCCAAGCCTGCCAAGAATTTTGCAAATTGAGCACCACATTGGACCTGTGACTTCTAACCACAGACATGACTAGGAATGGAGTGGGATGCGTGCCTGTTCAAAATCCTTGAAACCGAACAGTGCAAATTCAAGTGGGATGGTACTTCTGGATGCTCCATGTTCTGGATGCAAGTGGTGACATAATCCTTCTGGGGCTCACATCCTTCCCCTCATTGGTTGCCTGGAGCTCCTGGAACCCCCCCTAGACCCAGAGCAGCGGGAATAAAAGCAGCTGCTCGCGCTGGGAGGTTTCAGAGGCATTCAAGTGTCTCCACCACTTCTGCCAGAGTGCCATTGCCCACCGCCAAAGCTACTGCTGCTGCTCCTTCCTCTGCTCCCAGCCACCTGGTGCCGGCTATCAGAGAGGTATCATGGGGTTCTCGAAGCTGCCCCTCTTCCTGGTCCTCAGCATGCTGATCATCCACCAGGCAGGCATGCTCCAGGCAGCACCATTCAGGTCGGTCTGGAAAAATGGCCTTGTACCAGCTACACTCACTGAGGAGGAATCGTACTTCCTACTGGCCACAATGGTGAAATATTATGTGCAGAAGGCCAGTGAGCTGGAGTATGAAACTGAGGACTTCGGCATCATTGCCCAGGAGAGAACCAGTAATGCCGCCACTGGCATGACCCATAAGATGGCAGGCTTCCTGGGCAAATCTGGGAGCAAGATTAAGAGGAACATCATGTCCACCAACGTGGCTCCAAAGCCTTTGGCCGGCACCACAGGGATCTTCAGAACCAAGTAGTGAAATAACTCCAGGAAGAAGTGTCTCCTGGTGATACTGAGATCATCTGCCGGGAAACATAGATCCTATTCATTTCAAAACACTGTTCCAGACTTCTCTGGTGATCCAGTAGTTAAGACTGCACACTTCCACTACAGGGGGCAAACGTTCGGGCCCTGGTTGGGGAACTAAGATCCCACATGCTTAAGATCCCTCACTGCAACATGCCACACCATGGTGCAGAAAAAGCAAGCATACAAACAAAAACTGCTCCTTGCAGTTATAATTGTGATTATTCTAGTTTTTGAGTTTGAAAGGCAAAGACCCGACCCTTTGAGAATATTCCCTACAATGTCATCTGGATTCAGAGATAGACTTGGGTTCAAATACTGTGTCCTCTACTATGTCACCATGGGCCAAACCCTCTATAAGCCTGTTTCCCCATTTAACTTGAAGGCAACAATACTAGCTACCTGTTAGCAGCTGAACTCTATTCTTGTAATTTGCAATGAAAGAAACTTGCAGAAAAAATAGCATGGAAGACCCGCATGTATGCATGCTTGATGTTGAAAATGTTCTTTTCCTTGAAGTAAACTGAAGCTAAATGCAAAATAAAATCATTTGCAGTTATCTAGTGTGCATCTTTTAAATATTTGATTCTATGTTCAGTAAATATGATTCATGTCTCATCGGCTTATCTGGCAGAAAATTAGGGCCCTGTCAGCCAACTTTGCCAAGAGGTATTACATCCATTATGAATTCAAACTAACTTAGTCTTCACAGACATATTTTGTCCTTAGAAGTATTTTGA EMBV3_00698 GTCATGGTAGAATCAGCCCAGACCACATGGATCTTCACTCTGCCCTTCTGTGGAACAGGA Gene GeneID:788396|LOC788396:XM_002687500:390_cdna Constitutive 0 NULL GeneID:788396 5 GENE LOC788396 NULL similar to olfactory receptor 247 EMBV3_30381 ATCGCTGAAGAAGAAATAGAAACATACTCAGCATCCAGTTCGCTGTCCTCGTGTGGGCAG Gene BVT0102_224611 + 0 NULL GK000021.2:30754026-30817543 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120949 TCONS_00120947 TCONS_00120948 TCONS_00120950 1 XLOC_073304 Coding TCONS_00120947 XLOC_073304 NonCoding Coding - 21:30813381-30817271 - TSS90224 1659 2 TCONS_00120947_1 66 0.270042194092827 2 0.573926459244022 0.000540998691415945 1.75594265846845e-16 4.38412135683536e-05 5.03600625073994e-05 1.66171452169736e-36 2.52542152811143e-05 3.51519517333685e-06 8.87872342798263e-24 8.349070602845e-32 0.00013861335990916 3.02878355877049e-23 0 3.20500826129281e-05 2.83543807284961e-06 5.91464496459516e-06 0.000539932582672068 0 3.02481481023026e-05 4.63457191397481e-05 2.10535917060976e-63 5.48149152882245e-36 0 1.10593358660887e-05 9.09468118432267e-05 6.06617406281478e-13 7.46970281422995e-05 8.67873597668734e-10 0 0 0 XM_608945.4 LOC530472 PREDICTED: Bos taurus relaxin-3 receptor 1-like (LOC530472), mRNA. 0.0 1041 100.00 0.347197106690778 0 noncoding 0 0 0 0 -0.358917279648887 0.0286974636722164 0.0031488694495754 0.961326334155546 GAGTGGAGGGATTTCAAGATTATGAGGTAGCCCTCGATGGCTCAAGATTTCTGAGCTTTCATCTGCAAGGCCCGCCTGCTACTTGTTCTCTCTAGATCCTGGGGGCTTGACTGACCCAAACACACTCATCTGGCAGTATGCTGTGACTGAGCATGCTAGCTGTTGCATGAAAAGTGGCTGCTCAGGAGGTCTGGAGCTATGTAGCTGGTGGGGGAGGGGGGAGCAGTGGGGGGTGAGCAGTGACCTGAGTGGCCCACATAGGACAGAACTGGGACCAGTGGGAAAGAAGTCATGGGAAGCAGATTTCCATCCCTCGTTATGGCAGGCCTTTCCCATTTTGGAGCACCTGAGCTTTATGAGGTGGTGAGCTCCCTGTTCTAGAATTCATTACAACAGAGACTGATGGAGACAGAGTTGATGCATCAGATAGGGGTGTGGAGCTGCTGGATGATTTCACCAATCTCTTTGAGCCTGGAGACCCTGTGACTGATATGGGACAGGTGGGAGTGTTTGCATGCTACAGGCCTTAACAGTCAGCATCTCTTCCCCTTGCTCTCCAAAGGCATCACTGAAGAGGTGAGCCCCTGCCCCTTGGAGCAGCCAGACCCCAGCGCCTCAGCCTTGGCACGCTTTCTCTGCTGAATTCTTCCTTGAAGAGGACAGGACGCTTCCCTGCACCCCTCGCTTGTGTCACACAGCCTGGCCTGTTGGCGAGACCCTCCTGACCCTGGCCGCCTTTCTCTCTTCCCTTCAGGACAGAGGGGCAGCTGAGCCTTCCTTTCTCTTCCAAGTCACCTCACCCCCAGGTCCTCCCTGGAGCATTCTAAGTGTTGGAACCCCAGGCGGATGTTGCAGACCTTTTCTCAACCCCAGCACGCTCTCTGTGAAAGTTTTGGGGGCCCCCATGTCCTACTCTGTGTCCCTCCCTTGTGCGCCTTGAAACCTTTCTGTTTTGGCTCTTAGCGCTCCACTCTGCCTGCCTCCCTGCCATTCCTCTGCCCACCTCGGAGGACAAGGGCAGGCACACAGCTCTTCCTGGTCCCCTGTGCAGTGTGCTGCCCACACGAGGACAGCGAACTGGATGCTGAGTATGTTTCTATTTCTTCTTCAGCGATAAACTGTAAATATCTGTGTCTGAGTCTTCCCTTGTATTGCTTATACGGTAGGCTCTCAATAAATGTTTGGTGAATGAATGAACACTGTTGTGTAAGTCCTCACTCTCCTGTTTGCCTGTGTATGATGTGGTCTTTTGTCTCTTTCTCCTTTCCTCAATCTGAGCAGGCTTTCCAAAGCCTCCCCTGGGTTCAGGAAGACTCCTCCTAAAATCCAGGTTCCTGTGAACCGGGTCGGCTGGCCAGGCCATCTCTGGATCCACCTTCGTTCACCTATTTCATTCTCCAGAACTTCTTTATGTCATCGTCTCCATTCATTCTCACAGTATCCTTGGGAACCAGGTCACATTATTCCCATTTCATGGAAGAGCAAACTGAGGCTCCAAGTAGTGAAGTGGCATATAGCCAATGGGCAACAGAGCTGACACCATCCCAGGCCTGCCACCCTTCCTGCCTCTAATATGAGTTGTCAGACTGGAGTTAATCAAAACAAATGATATGAGTGAATGAGGAGACAGCTTATGGCTCACTGCCTTCCACAGTTGTT TCONS_00120951 s 3' 3078 TCONS_00120951 s 3' 273 EMBV3_01300 TGCTCCAAGCACTTACATCAGCCTGCAGTTGGACACAATCAGCTAACACAAGCCTCTTTT Gene GeneID:282275|ITFG2:NM_174562:4_cdna Constitutive 0 NULL GeneID:282275 5 GENE ITFG2 ADP50 MDS028 integrin alpha FG-GAP repeat containing 2 EMBV3_39047 TTTGTCTAGGCACAGGTGTTTATTTCAGGGAGGGGTGAGTGGAAAGAGAAGTAGAGCGGG Gene BVT0102_293409 + 0 NULL GK000003.2:87842617-87924720 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170503 1 XLOC_103599 Coding TCONS_00170503 XLOC_103599 Coding Coding JUN 3:87840376-87844863 = TSS127388 4391 1 TCONS_00170503_1 303 2 0.0216228265715559 0.00048750743258795 0.000169957916658204 0.000677462588529013 0.000196825046009347 0.000414773469704372 1.1471085306822e-05 0.000275919670898472 0.00115155023040256 0.000120223668624051 4.48508423136119e-05 9.18658868941003e-07 1.29297294221731e-05 7.71957407733153e-05 0.000409380386425618 4.87034518636579e-05 0.00176603633858742 0.000329205380537432 0.00154980492466815 0.00046580894709605 0.00045011471140457 5.60095840046648e-05 0.00121463998689685 0.000746343865258181 0.000865647386142007 0.000362392171853117 0.00119630333606677 0.00097248172343425 4.64008147486059e-05 2.93433084893648e-05 7.26380920691707e-06 NM_001077827.1 JUN Bos taurus jun proto-oncogene (JUN), mRNA. 0.0 3516 99.95 0.444317923024368 NM_002228.3 JUN Homo sapiens jun proto-oncogene (JUN), mRNA. 0.0 2349 88.72 0.409246185379185 TCONS_00170503_1 sp|O77627|JUN_BOVIN JUN_BOVIN Transcription factor AP-1; 0.0 555 90.45 0.996699669966997 4 coding 0 0 0 0 0.139830256082459 0.375525918326495 0.0136904353327063 0.842428850050845 ATAAGGGTTCAGAGTTGCACAGAGTGTGGCTGAAGCTACGAGGCGGGAGTGGAGGTGCGCGGACGCAGGCAGGCAGACAGGCACAGTCAGTCGGGAAGGACTGCAAATCCTATTCTCCAATTTCTCTCCAACTGCCCGGAGCTAGCGTTTGTGGCTCCCGGCCTGGTGTTTTGGGGAGCGCCGGGAGAGCCCCTTCTCCAGCCGCCCCCAGGCGGAGAGCCCCGCTGCGCGGGCGCTGCTGACAGCGCGGAGAGCGGCTACTGTCCGCCCGGGGAAGTCCGGAGAGCGGCTGCAGCGGCAAGAACTTTTCCCGGCCAGGAAGACAGGAGACAAGTGGCCGCCGGGTCCCGGAACGAACTTTTGCAAACCTTGCCTCCGCCCGAAGCTGCCGCGGCGGCGGAGAAGAAAAAGAGGCGGCGGAGAGAGGAGGACGTGCGCTCCGCTTCGCTGGCACCGGTTGCTGAACTTGGGCGAGCGCGAGCCGCGACTGCCGGGCGCCCCCTCCCCCTCGCAGCGGAGGAGGGGACAGTCTTCCGAGTCGGGGCGGCGGACACCCGCCGCCGGCCGGCCACCGCGAAGTCCGCTCTCCCTCCTATCACCGGGAAGCGAGTTCGTCTGCGGGCTCTGAGGAACCGCTGCGCTCGAGAGAGCTCCGTGAGTGACCGCGACTTTTCAAAGCCGGGCGGCGCGCGCGAGCGGACAAGTAAGAGCGCGGGCGGCGCCTTAACCCTGCGATCCCCCGGACTGAGCTGGTGAGGAGGACGCCGGGGGCGGGGGCTGCCAGCCGGCGGGGGCGCGCGCTCTTCCAGAAACTTTCCTTGCTTACCGCCCGGGGAGGCGCGGGTGTCCCCCGCTTGCCAGCGCGCTGTTGCGGCCCCGAAACTTCTGCGCGCAGCTTAAACTAAGCCCACGCGAAGTGACGGACTGTTCTATGACTGCAAAGATGGAAACGACCTTCTACGACGATGCCCTCAACGCCTCGTTCCTCCAGTCTGAGAGCGGCGCCTACGGCTACAGTAACCCCAAGATTCTGAAGCAGAGCATGACCCTGAATCTGGCCGACCCGGTGGGCAGCCTGAAGCCGCACCTCCGGGCCAAGAACTCCGACCTCCTCACCTCTCCCGACGTGGGGCTGCTCAAGCTGGCGTCGCCCGAGCTGGAGCGCCTAATCATACAGTCCAGCAACGGGCATATCACCACCACGCCGACCCCTACCCAGTTCCTGTGCCCCAAGAACGTGACGGACGAGCAGGAGGGATTCGCCGAGGGCTTCGTGCGCGCCCTGGCCGAACTGCACAGCCAGAACACGCTGCCCAGCGTCACGTCGGCGGCGCAGCCGGTCTACGCCAACCTCAGCAACTTCAACCCCGGCTCGCTGAGCAGCGGCGGCGGGGCGCCCTCCTACGGCGCGGCTGGCCTGGCCTTTCCCGCGCAGCCCCAGCAGCAGCAGCAGCAACCGCCGCAGCCGCCGCACCACCTGCCCCAGCAGATCCCCGTGCAGCACCCGCGGCTGCAGGCCCTGAAGGAGGAGCCGCAGACGGTGCCCGAGATGCCCGGGGAAACGCCGCCCCTGTCCCCCATCGACATGGAGTCCCAGGAGCGGATCAAGGCAGAGAGGAAGCGCATGAGGAACCGCATCGCTGCCTCCAAGTGCCGGAAAAGGAAGCTGGAGAGGATCGCGCGGCTGGAGGAAAAAGTGAAAACCTTGAAAGCGCAGAACTCGGAGCTGGCGTCCACGGCCAATATGCTCAGGGAACAGGTGGCCCAGCTTAAACAGAAAGTCATGAACCACGTTAACAGCGGGTGCCAACTCATGCTAACGCAGCAGTTGCAAACGTTTTGAGGCGAGACTGTCGGGGGCTGAGGGGCAACGGAGAAAAAATATAAATAACACAGACAGATTTGAGAACTTGACAAGTTGCGAGAGGGAAACAGAGAAAAAAAAAAAAGTGTCCGAGGACTAAAGCCCAGGGTATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTAGGAAGGACTTGGCGCGCCCTCCCTTGGCGAGGAGCCAGGGAACGGCCGCTCGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCAAACAGAACGTTAGACTTTTCTTTAACATTGACCAAGAACTGCATGGACCTAACATTCGATCTCATTCAGTATTAAAGGGGTGGGGTGGGGGAGGGGGTTGCAAACTGCAATAGAGACTGTAGATCGCTTCTGTAGTACTCCTTAAGAACACAAAGGGGGTGGGGGAGGGGAGGCGGGAGGGAGGTTTGTGAGAGCGAGGCCCAGCCTGCAGATGAGCTCTTTCTGGCCTGCCTTCCATAACTGTGTATGTACATATATATATTTTTTAATTTGATGAAAGCTGATTACTGTCAATAAACAGCTTCATGCCTTTGTAAGTTATTTCATGTTTGTTTGTTTGGGTGTCCTGCCCAGCCTTGTTTGTAAATAAGAGATTTGGAGCACTCTGAGTTTACCATTTGTAATAAAGTATATAATTTTTTTATGTTTTGTTTCTGAAAATTCCAGAAAGGATATTTAAGAAAATACAATAAAATATTGAAAAAGTTACCCCTCCCCCAACCTCTTTTCTGCATTATCTATAGATTACTTGTGTAGGTGGAGTTGAAAGAGTTGAGTGTCAATTAAAATAACTGTGGGTGCTTCTTACTAGCAGGCCCTGAAAACTGTTGTCTGCTGGACAACAGTTCTTGAGAAAGAACTGCAGCTGATGCTGTCATCAAGTCATACTTTTCCCTCTCCAACAATCTACATAGAGTTGCTTACAAAGGATAGTGTAGCATTTCAGGAAGATGAGAGAAGGGAGGTTGTGGTGGAGAGGGACAGCCCACTGGGAAATCTAACATTTTAGTTTGGATTATATCAAGTGGCATGTGCTGTGACCATTTATAATGTTGGTAGAAATTTAAACAATAGATGCTTATTCTCAAAGCAGGAACGGTGGCAGATTTTTTACAAAAGCTGTATCCTTCCAATTTGGAATCTTTAACAATTCCTAGATAAAAGAGATGGTCTTTGCTTATGAATATTTATAACAGCATTCTTGTCACAATAAACGTATTCAAATACCAATAACAGATCTTGATTTCCTTTCCCTTTTCTACTTTTTTTCTTCCCAAGCTCTCTTCTGAAGCTTTTCTTTTCAGTTGCTGGGGTTAACATTACTGCCATCTGAAGTTATTTGGTAATTAAGAAGCAAAGAATTTAGGAAAAGTCAACACAGAAGTTGCAGTCTGGATGAAATGTTCTCCCTGCTTCATTCATTCTCTTTCTCTCTCTCTCCCCGCTCTACTTCTCTTTCCACTCACCCCTCCCTGAAATAAACACCTGTGCCTAGACAAATTACCAGTATAGCAGTTTACTGTTTCAAATTCTTCTATAGTCTCTTCATTCCTCTCTAAAATAACCTTGCTTAAATTATTATAGACTCTCAAAAATGGTAATCTAGATACTATAAAAAGATCCACAAGAGAAAAAACATGAACATAAATGCAGTGATTGCTTATGTATTAATAAACCTTCACTCTGGGGAAATGGCAAACTTAAATTCTGTCTGCAGATAAAACTTAGGAGATCAATAAGGCAGAACTCAACAAGGGAACAATTTTTGCTTGGTTGCTTTTAATCCCAAGAGCCAGTGTGATTATCAAGCAGCACAAGCAATTTGATATCCAGGAATATTTCACAAACCACTAATTGAGGCAGGCCGTTTGCTCATTAGCAGTGCTCTAGTACCCAACAGGTCTGAGAATGCTAATATCCTGCCTGTGGCTGTAAATCCAAAGACACAAAGAGTTTTTCTTGGGAGGTTATCTAGGAGTGGAAGGGATTGGACTGAGTTGTTACCTACCAGATACTCCATTGTAATAATACTTCTTTAACAAAGGATTACTGGGAGCAGAGACGAGTTTGCCAAACAGTGAATTTGCCGATGTCAGCAACCCGGAAAGTGAGTTTATTTTGACCATATGTAGGAATAGTGAGCAGAGGGACAATAAAGCACTCTGGGGTGGGGCTCTGTGGAAGCTAAACAAGAGCCAACTAGAAAAAATAAGCAGGCTGGGGAATTAATTACCTGCAAAGGTAGACTAAGCCCAGACAACAGAGCAGCACAGAAAAGCCACACCACTCCCCAGTTTGCTTTAGACTCTGATGTTTAAAAGAAAAAAAAAAGCCTGAAACTCATACCTATCACTCCCTTTGTTTCAATTATGGCTTTGAATGTATATCCCTGAAACTCTAACAAAAGAGACAGAAAAAAATAATTGTGGTAGAGGAAATTCACCAGTGATCTCCTATAAACTTTGGAGACAGAAAATCAGATATTTGCAGACAC EMBV3_35686 CAACGAAGTCTGCTTGCACTTTGGTATAGGATGCCTCTCTGGGACCGCGATTACCCCTTT Gene BVT0102_104238 + 0 NULL GK000006.2:7762499-7797198 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18608 GAATTTCAGGGATGGGTGGCAAAGGCATTGTGGTGCCTGAACCTCTCGTTCTCTTGTGTG Gene GeneID:781425|MCART1:NM_001099394:53_cdna UTR3_Alt 1 NULL GeneID:781425 8 GENE MCART1 NULL mitochondrial carrier triple repeat 1 EMBV3_23372 GAAGCAAGTTGTGTGTAGACCCATCCCCGAAGACATGCTAAGCCTCCACAACAAAAGGTG Gene GeneID:615378|RTTN:XM_002697665:133_cdna Constitutive 0 NULL GeneID:615378 24 GENE RTTN NULL rotatin EMBV3_11201 AAATAAAGGCTTCTAATACAGGTGCCGGAGACCGCTTTTCCTCAGATGTACTCCCCACGC Gene GeneID:287007|PDC:NM_001166527:28_cdna Constitutive 0 NULL GeneID:287007 16 GENE PDC PHD RPR1 phosducin EMBV3_36236 TGGCCCCGCACTAGATCACGCCTTCAGCTCTGACCAGTGAGTTTCATCTCCCCAAATATA Gene GeneID:615764|ADI1:NM_001035468:28_cdna Constitutive 0 NULL GeneID:615764 8 GENE ADI1 MGC128658 MTCBP-1 acireductone dioxygenase 1 EMBV3_13577 ATCAAAGCAAAACCTTACAGGTCACTACCCGAGAAGCCAGACAGTATTTCCGATCGCCCC Gene GeneID:613406|SPATA9:NM_001034736:17_cdna Constitutive 1 NULL GeneID:613406 7 GENE SPATA9 MGC127816 spermatogenesis associated 9 EMBV3_07888 CACCTTTTATGGTCGTAGCATATAGTGTTGTATATTGTAAATTGTAATTTCAACCAGAAG Gene GeneID:535450|PUM1:XM_002685620:287_cdna Constitutive 3 NULL GeneID:535450 2 GENE PUM1 NULL pumilio homolog 1 (Drosophila) EMBV3_26878 GTTGTCTCTGCCTACAGCGTTGCCCTCAAACCCGATGACCCTCTCAACTACCTCATCGGA Variant GeneID:326346|NDUFA11:NM_175718:12_cdna 186^302 2 EMBV3_33991 GeneID:326346 7 GENE NDUFA11 b14.7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa EMBV3_30091 ACTGAAAAGGGACTGGCTTGTCTCCTAAGCTGGCCCACCACTCTTGCTCTACTGCTCTTT Gene GeneID:618480|GFRA4:XM_002692385:296_cdna Constitutive 0 NULL GeneID:618480 13 GENE GFRA4 NULL GDNF family receptor alpha 4 EMBV3_43691 TATAGTAAGTTGCGTTAAGTTCGACTTTCCTTAATTTGATTATATTAATAGTTATATTAA Gene GeneID:519597|SNX4:NM_001080281:65_cdna Constitutive 2 NULL GeneID:519597 1 GENE SNX4 MGC152099 sorting nexin 4 EMBV3_33400 AGAGGAGGAAGCAGAGGAGCTGACTGGGAGAGGTGAAGCTGATCCAGATTGGGACCCAGA Gene BVT0102_353898 + 1 EMBV3_15639 GK000017.2:71457054-71459353 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06821 GGATCATTAGAAATAGACCCTGGGAGATGAGTTGTTTAGCCTCCATCCTGGCAAGGGCCA Gene GeneID:787004|SMAGP:NM_001083793:125_cdna UTR3_Alt 1 NULL GeneID:787004 5 GENE SMAGP MGC151756 small cell adhesion glycoprotein EMBV3_16846 TTGACCGTCTCTTCAGTTACACGTACTCCACTGCACCAACGCCTGTGATGGATAATTCCC Gene GeneID:507367|PDK4:NM_001101883:27_cdna UTR3_Alt 2 NULL GeneID:507367 4 GENE PDK4 MGC166250 pyruvate dehydrogenase kinase, isozyme 4 EMBV3_00107 GGGGCAGTAATAGGAGAGCTAAACTGCTTGACTAATGCACCCATGAAATATTCTGCCACC Gene GeneID:535620|SLC9A10:XM_002684747:208_cdna Constitutive 0 NULL GeneID:535620 1 GENE SLC9A10 NULL solute carrier family 9, member 10 EMBV3_25896 CCTTGCTCTTCCACAACCAAGGACTCATTCCAAGTTCTCCACGGCTTTTGGTGAGAGACA Gene GeneID:506110|LOC506110:XM_002694041:112_cdna Constitutive 0 NULL GeneID:506110 16 GENE LOC506110 NULL draxin EMBV3_41190 GTTCGTTGTTTGGCACCACAAAAAGGGCAGTAAACAGATCCGAGCTATCCTAGGCCAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38753 CTCATGCCCGTTTAGAAAGGCGTGGTTCAGGAGCTTTCCCTTTAGATCACAACAGTACAC Gene GeneID:529927|ANKRD34C:XM_002689369:33_cdna UTR3_Alt 1 NULL GeneID:529927 7 GENE ANKRD34C NULL ankyrin repeat domain 34C EMBV3_17841 CAGCTGTGCTCACCTCTTCCTGCTTTGTGCCTTGACTAAGGCTATTGACCCTAAATTTCT Gene BVT0102_062044 + 0 NULL GK000020.2:17006621-17009550 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113421 TCONS_00114682 TCONS_00114684 TCONS_00113420 TCONS_00114683 TCONS_00113422 TCONS_00113425 TCONS_00114685 2 XLOC_069030 XLOC_069327 Coding TCONS_00114683 XLOC_069327 Coding Coding KIF2A 20:17007164-17076679 j TSS85469 4631 1 TCONS_00114683_4 706 20 0.933668038093046 6.52083917141277e-05 0.000425068279845303 0.000310295474338544 0.000336416687456903 2.595369064195e-09 0.000299062412524405 0.000377771525207499 0.000300519624199124 0.000804951333709872 0.000691122716478067 0.000119161468922477 0.000214620782905449 3.87510813215252e-05 4.63962305965274e-08 0.000103297303539771 0.00305219632256698 0.000346532640354421 7.83744955316791e-07 0.000277684040008511 0.000411382225055823 1.19748361638187e-08 2.27903337651448e-06 6.87408454594829e-07 3.93758174731412e-08 3.92910610548838e-08 1.63971219130107e-07 0.000455459330125391 0.000210087158976868 2.74256420105481e-24 0.000349929312901343 NM_001077073.1 KIF2A Bos taurus kinesin heavy chain member 2A (KIF2A), mRNA. 0.0 3608 96.89 0.465558194774347 NM_004520.4 KIF2A Homo sapiens kinesin heavy chain member 2A (KIF2A), transcript 0.0 5476 92.38 0.815590585186785 TCONS_00114683_4 sp|O00139|KIF2A_HUMAN KIF2A_HUMAN Kinesin-like protein KIF2A; 0.0 1456 99.15 0.998583569405099 1 coding 1 1 0 0 -0.00355662802794415 0.974707070121242 0.00802661364344595 0.875865500786153 NNCCCGCCGCCGCTGCTCCAGATGAGGTGATGGCAACGGCCAACTTCGGCAAGATCCAGATCGGGATTTACGTGGAGATCAAGCGGAGCGATGGCCGAATACATCAAGCAATGGTAACATCTTTAAATGAAGATAACGAAAGTGTAACTGTTGAGTGGATAGAAAATGGAGATACAAAAGGCAAAGAGATTGACCTGGAGAGCATTTTTTCACTTAACCCTGACCTTGTACCAGATGAAGATATTGAGCCCAGTCCAGAGACACCCCCACCTCCAACATCCTCAGCCAAAGTAAACAAAATTGTAAAGAATCGACGGACTGTGGCTTCTATTAAGAATGAGCCTCCTCCAAGAGATAATAGAGTGGTTGGTTCTGCACGCGCACGGCCTAGTCAGCTTCCTGAACAGTCTTCCTCTGCACAGCAGAATGGTAGTGTTTCAGATATATCTCCAGTTCAAGCTGCAAAAAAGGAATTTGGACCCCCTTCACGTAGAAAATCGAATTGTGTGAAAGAGGTAGAGAAGTTGCAAGAAAAACGAGAAAAAAGGAGACTGCAACAGCAAGAACTTAGAGAAAAAAGAGCCCAGGATGTTGATGCTACAAACCCAAATTATGAAATTATGTGTATGATCAGAGACTTTAGAGGCAGTTTGGATTATAGACCGTTAACAACAGCAGATCCTATTGATGAACACAGGATATGTGTTTGTGTAAGAAAACGACCACTCAATAAAAAAGAAACTCAAATGAAAGATCTTGATGTAATCACAATCCCTAGTAAAGATGTTGTGATGGTACATGAACCAAAACAAAAAGTAGATTTAACAAGGTACCTAGAAAACCAAACATTTCGTTTTGATTATGCCTTTGATGACTCAGCTCCTAATGAAATGGTTTACAGGTTTACAGCTAGACCACTAGTGGAAACTATATTTGAGAGGGGAATGGCTACATGCTTTGCTTATGGGCAGACTGGAAGTGGAAAGACTCATACAATGGGAGGTGACTTTTCAGGAAAGAATCAAGATTGTTCTAAAGGAATTTATGCATTAGCAGCTCGGGATGTATTTTTAATGCTAAAGAAGCCAAACTATAAGAAGTTGGAACTTCAAGTGTATGCAACCTTTTTTGAAATTTATAGTGGTAAGGTGTTTGACTTGCTAAATAGGAAAACAAAATTAAGAGTGCTTGAAGATGGAAAACAGCAGGTTCAAGTGGTGGGATTACAGGAACGGGAGGTCAAATGTGTTGAAGATGTACTAAAACTCATTGACATAGGCAACAGTTGCAGAACGTCCGGTCAGACATCTGCAAATGCACATTCATCTCGGAGCCATGCAGTGTTTCAGATTATCCTTAGAAGGAAAGGAAAACTACATGGCAAATTTTCTCTCATCGATTTGGCTGGAAATGAAAGAGGAGCTGATACTTCCAGTGCGGACAGGCAAACTAGGCTTGAAGGTGCTGAAATTAATAAAAGCCTTTTAGCACTCAAGGAGTGCATCAGAGCCTTAGGTAGAAATAAACCTCATACTCCTTTCCGAGCAAGTAAACTCACTCAGGTGTTAAGAGATTCATTCATAGGTGAAAACTCTCGTACCTGCATGATTGCCACAATCTCTCCAGGAATGGCATCCTGTGAAAATACCCTCAATACATTAAGATATGCAAATAGGGTTAAAGAACTGACTGTGGATCCAACTGCTGCTGGTGACGTCCGTCCAATAATGCACCATCCCCCAAATCAGATTGATGACTTAGAGGCACAGTGGGGTGTGGGCAGTTCCCCTCAGAGGGATGATCTAAAACTTCTTTGTGAACAGAATGAAGAAGAGGTTTCCCCACAGTTGTTTACTTTTCACGAAGCTGTCTCACAAATGGTAGAAATGGAAGAACAAGTTGTAGAAGATCACAGGGCAGTATTCCAGGAATCTATCCGATGGTTAGAAGATGAAAAGGCTCTCCTAGAGATGACTGAAGAAGTAGACTATGATGTGGATTCATATGCCACGCAACTTGAAGCTATTCTTGAGCAAAAAATAGACATTTTGACTGAACTGCGGGATAAAGTGAAATCTTTTCGTGCAGCTCTGCAAGAAGAAGAACAGGCCAGCAAGCAAATCAACCCGAAGAGACCCCGTGCCCTTTAAATCAGCATTTGCTGCTAAAGGATCCCCAGAACCCTCGCTACTGTAACATAACAATCATTCAGCTGTAAGGGCCATTTGAAAGTTTGAAATCTTAAGTGTCTGTGGAAAATGTCTTGTCCCTTCACCTGAATGACATTTCAATTTTGTGAAACACTCTTTTGTCTACAAGATGCTTCTAGTCAGGAGGCACAACCAAGATTTGGGAATAGTGAAGCATTTTGTTTCATTTACCCAGATAGTGAGTTACTTTTGGAGATCCTTGCCAATTTTATTTTCTATATGATGAAGTAAGATTGTGGACTTGATCCAGAGGTGAATAGTAAGGGGAAGCCACAGCATTTCCTTTTAACTCAGTTCAGTTTTCTTAGCAAGACTGAGCAGTTTTAAATCCTTTGCGTGCATGCATACCTCATCAGTGATTGTACATACCTTGCCCACTTCTAGAAACAGCTGTGCTCACCTCTTCCTGCTTTGTGCCTTGACTAAGGCTATTGACCCTAAATTTCTGAAGCACAGCCAAGATAAATTACATTCCTTATTTGTCATTGTAAATTACCTTTATTGTGTGTACATTTTTACTGTAATTGAGACATTTTTGTGTGTGTGACTAGTTAATTTTGCAGGATGTGCCATATCATTGAATGGAACTAAAGTCTGTGACAGTGGACATAGCTGCTGGAGCATTCCATCTTATATGTAAAAAATCTGGAATTATGATTTTAAAACCATATAACATGTGGTTATAATTTTCTTAGCATTTTCTTTGTAAAGAACTAAAATATAAACTAGTTGGTGTATAATAAAAAGTAATGAAATTCTGAAAAGAGTTTTATCTTAGGATAATACATATATACGCAGTGTGTGTTCCAGTGTGGTATTAACAAGACTAATAGTGCAATTTGATCTTTACCAATACCATTACTTAAGTTGAAGTGTCCATTAGCACCCCAAAATGTACTTTTTAAATGGTACAGTTAAAGGAAATTGGCTTCTGATGCATGAATATGTACATGTACATTGAAAGTAGTCCATAATAGAACTGTTAGGTTTAAGTCAAGTGTAGACAGTACATAACTTATGTTGAAAAAGAATTTAAGCTAAAAAAGAGTTGACTTTGCCATAAAAGGCAGATCTAATGCAAGCTCCACCCATTACCTAATGTTTGATGTTTCACCACTATTTGGCGAGAACTACCAAATTCTCACCAATCAGTTCATCTAGGGCATGCTACTTTTTAAATGGTGGCATTTATTTTTACAGATTGCTATTCCACGGAAGAAAACTGGCCACTTTTCATGTAAATATTTTGTTAGAAGATTTATATCTCTCTCTAGGAGTTTTCCCCCGGTTCCCAGGATAGTGTCTAAGGAGTACATTAACAAAAAGTCTCCCAGGGATATCTTGTTTTGATTTACTCTAGGGAACTACCAGCTCATTCCTGTGGGCTAAAGGGAAGCTATGAACAGAGAGTCATATGAGCCAGACTCCCTACTTCACTGTCCATAGAATTCAAAGGGTAGTTATGGGAAATCCTAACACCATGGTGAAAAGCTCCTCTGTAAACTTGAAATCTAGTACAAATGTAGATTTTCACAGTGTGCTTATTATTAATAAATTAAATCTGTGTAATGAGTTTTAGAGACAATTTACTTCAATACAATCACCTTTGTTTTGGAAGGAACTCAGGTTTTCTTGCAGCTGTGAGATATGTTCTACTTGTGTTTATTTCAAGGAAAAGAGGAAGAATGGAGAACTGTTAGTATTAACCTTACAGAGGCTTTTTAAAAATGTAGTTTCTGAGCCTAACCAACCTTCAAAGGGCATAAAGATACATGAATTTACTCATTTTAAGCACAACAGACTAGTCTTAATTTATTAAATTAAAAGGGTACTGTATATGTGGAAGGTCTCCTGAAATTGAAATACACTGCCTTATACTATAAAGGCTTCATTCTGAATAGCATTCAAAGTATATTAAACATTAGTACCAGAAAGGATCTTGGTAGTATAATCCATTCTTTCTGTTTTACAGATAGGGAAATCTAAAGGTTATAAAAGGGACTAAAACTCAGCAAGCAATTCATAGGACAGAGAAATAAGAGGGAAAGCTGAATTAAATCTTTAAAGATAGAGATGGTACAAGTAAACTTTGCTAAGTAGTTTTGTGTGATTTTAAAAAAACCTGCTCTTAAGCTTATGTAGTATTTATGTACAAAAGTGGCTTTATGCAGTTGTTGTCTAAAGAATGACTTACATTTTTTGGATCTGGATTAAATGTTCTTTCCTTTCTCAGACTTGAAAACTGATATCCCTATTAATAATTATTTAAAATTAACTAAAAATATACATTATTTTAGTTATATAGGAATGTTTTAATATATAACTTTGAGGCCAGATTTCTAAAAAATCTGTTTAGGCAAACAACCTAGCTTTCCTTCTAGGTTCACTCGCTGTATGGACCCCTGTTAAAGTAATCTGGAG EMBV3_16108 CAGGACTACGTTGCCCCGGATCCCTTTGGAAAGCTAATGTCTAAAAAGACACCCATGCTG Gene GeneID:785907|LOC785907:XM_002695206:913_cdna Constitutive 0 NULL GeneID:785907 18 GENE LOC785907 NULL similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT5 (Solute carrier family 6 member 16) EMBV3_17441 CGAATGTAGACCTCGCAAAGTGATAAGTTATTTAGAGGGAGAAGCAGTACGTCTGTCTAG Gene GeneID:529491|PMS1:NM_001077981:36_cdna Constitutive 3 NULL GeneID:529491 2 GENE PMS1 MGC152061 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) EMBV3_17305 GGAGTCCTTCGTGGTGAAGGTGAAAGGTCAAAATTGTTACTCGGCTGTATCCTCAGACGA Gene GeneID:512788|IGFL1:XM_002695176:820_cdna Constitutive 0 NULL GeneID:512788 18 GENE IGFL1 NULL IGF-like family member 1 EMBV3_25201 TCAGATGAGCACGTCTTGATATTTCGGTCCCAGAGCCCTTCCTCTCTCTTATGCATCCCT Gene GeneID:510841|PDK3:NM_001101934:14_cdna Constitutive 0 NULL GeneID:510841 X GENE PDK3 MGC166016 pyruvate dehydrogenase kinase, isozyme 3 EMBV3_17542 GAACTTCAAGATGAAAGAAATCCTCTGGATCGGGGTCAGTTGCCCATGACAGGCAGAACC Gene BVV0102_250851 + 1 EMBV3_37934 GK000013.2:60303718-60341016 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05047 TCAGAGACTTTATTGCATATCGCAGTTCTGCAGGGGAAATGATCCAAACACACAGGGATG Gene BVT0102_084833 + 0 NULL GK000014.2:84244275-84253648 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054089 TCONS_00054091 1 XLOC_031901 Coding TCONS_00054089 XLOC_031901 NonCoding Coding SNTB1 14:84251245-84258195 j TSS39768 3758 2 TCONS_00054089_4 86 0.0976583288983502 3 0.459634479781263 0.00129903315669884 0.00267577305916449 0.00196259647927109 0.00146334513304419 0.000911815851832063 0.000947390381181127 0.00138115038706419 0.00149821788563618 0.00141339386411668 9.16367548657705e-12 4.9005547736604e-06 1.30291404224612e-05 0.000101820429605823 4.63308602121054e-05 9.00827702361687e-05 0.00145628729796034 0.00183102051320427 0.000633572851669658 0.00259309247963656 0.00110113322328979 0.000666044896667476 0.000656326185446089 0.000687271819175981 0.000148068612709885 0.00193634578569801 0.00151633644498543 0.00116125952115972 9.67385376169254e-09 2.17273112334958e-06 6.6563415228023e-06 XM_870259.5 SNTB1 PREDICTED: Bos taurus syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) (SNTB1), mRNA. 0.0 4922 100.00 0.725918041511442 XM_005251031.1 SNTB1 PREDICTED: Homo sapiens syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) (SNTB1), transcript variant 0.0 1049 77.10 0.36083022884513 0 noncoding 0 0 0 0 -0.0152606264087779 0.880684599490649 -0.0113973384980418 0.815582600815334 CTCAGGTTGTTTTTTAACAGCTCGCTCCTGGCTTCTTACATGTGTTTTTGTTAACTTGGGTAACGTCACTGGGGGAGTGATTGCTTTTTTCATCAGGTGATAGGCGCTTCATTAATTGATGATTGATTCAGTTATAGATTGTGTGTGTGTGTGTGATGATGAAAACAATGATCAGAGGTAGCTTGCTCTAAATCGAAATGTCAGGGACTTCTCTGGTGGTTCAGTGGCTAAGAATCTGCCTTCCAGCGCAGGGGACCCAGGTTCCACCCCTGGTTGGGGAACTAAGACCCCACATCCCTGGGGGCAACTGAGTCCACATGCCAGAGCAGAGAGAAGTCCTCCGACTACAGAGAAGGTCCCTTGTGCCGCAACTAAGATCCAGTGCAGCCAAATAAATGGTTTTTTTAGTGTCAGATTTTTTTTCCAGCTTGAGACAAGGTCATTGGAACACCTGTCTCCCTATATATCAGATGGTTACATTAGCGCTAGAGCCCAGATAAAATGTAGTAAATCTTTCTGTTTATTTCCCTTCATTTCACAGGACAAGCTTGCACCTACAAAAACCAGGAGTGCCGACTGACCATACATTATGAGAATGGATTTTCAGTTACCACTGAGCCACAGGAGGGTGCCTTCCCCAAGACAGTCATACAGGCTCCTTATGAAAAGCTGAAAACGTCTTCAGATGATGGAATCAGGATGCTGTATTTAGATTTTGGAGGCAAAGATGGAGAGCTTCAACTGGACCTGCACTCCTGCCCCAAGCCGATTGTTTTCATCATTCATTCCTTCCTGTCAGCTAAGATTACAAGACTGGGGTTGGTGGCCTGAGCAGGGGGGTGAATTACCTCTGAGCAAAGGAGGCTTCGCTGCCCCCAAAACAGCGTCGTGTCGGACAGCATTCGCAGTGACCACCAGATGCGGCATGTCGGCTTCAGACCCGAGTCCCGCGAGCAGTGCCCGGCTTCTGTCAGTTTCCCAGCGATAAAGGGTACCCTCAAAACACCGCAAGGACTGTCAGAATGAAACTGTTTTTTTAGCACAGTAAAAGGGTAGAGCGGTGAGGCTGATTGGAAATACACAGCACAGCTCTTAGATAACGACAACCAAGGACATGCTACTGAAACAGCATGTGCAGCTCTTAAGCATAGTTTCTAGGCAACTGGTTCACCTGCTCAGCCAGGGCTGAACAGATGAGAAAAGGACGTTTTCCGCCACCACCCCCAACCCCAGGAGTAAGGACCCCGCGTTTTACTGTGCCCCATTTCCTACTTCTGAGCTGACTTCCACTGGTAAGGAAAGGACTCAATGGAAACCCACCTTTGATTTAAGTATGAAACAGCTGTTACTTTTTCTTAATGAATTACCTTTCAGTGATGTAGAAGGATGTGTTCTCATGAGCATATGATGAGTGGGAATTCACACATCAGATACTTCTCTGAGCTGTAAGCCAGTAGATTCTGAGCCAGAGTAGGCTGCTTAAATTGCAAAGCTTTGCTGAAGAGTGGTTTGCATGAAAGAATTAATTCTGGGACTACACTTATACCAAGGCCTGCTATTTTAGAGCCATGACTTAGAGCTTTATTTATAGAAAGCAAATTATGGATTTTTTTAAAAAGATTGTCATTTGAGATATATATATAATAATTCACGGGGGGTTAACTTGTACCCATTTTGTGGTTTTCAGTGGAAGTGCTGAGCAATGTATTGGCCCTTATTTCTGCCTGTGCTGTATGCATGCATTTTCAAGCAAGTAATAGAGCCTTATATGATTCTGTTTAATACTGGGTTTTACACAGAGAGCCAGTATTATAACCAAACCCATGAATAGCACTCACAGCTCTTTTGGAATTCCAGGGAAATAATATAATGACCTCATATTTTTCTACAAGAATATTTTCAGCATAGTGAAGTCACTCAATTGTGTCCGACTCTTTGCGACCCCACGGACTGTAGCCTACCAGGCTCCTCCGTCCATGGGATTTTTCCAGACAAGAGTACTGGAGTGGGGTGCCATCTCCTTCTCTAGAGGAGCTTCCCGACTGTAGGCAGACGCTTTACTGTCTGAGCCACCAGGGAGGTGCCAGACAGCACAGTCTTATTGATTTAACACTTTTGCTTTTATCTTTCAGAACACAGTCACTGAAAACAACCTGTTATTTGATTTTAAAGTCACTTGCCTCAAATCTTGAGAATTAGCTCTAGAATTTCTGTATTTGCAACACTTCTCTCCACTGTAGTTTACACAGACAAATGTTCCAGGTTAGATTTGTGTGTCTTTTCAGAGAGCTATGCAGAAAGATTTAACAAGTGATTTTGTTCACTCAGACACATGTGTTTATGGAGTTTTACTTTAGATCAGCATTTTATTTTAGATAGGTGTTTCCCCAGAGTAATACAAGTAACATTAATTCAAGTTCCAAAGGGTATTGATTGAATGGTATTTTGTGTAGAGGGAAATAAAAGGGTTAGTAATCAAAAACTGTTATATACTGCATTAAAAAATGTTAAACAGAGTTCATGGTTGCAGCCCTCTTCAGAGACTTTATTGCATATCGCAGTTCTGCAGGGGAAATGATCCAAACACACAGGGATGATCCTATGTCATTCCTAACACGTCTACAGAACTACTTTCTAAGACACCTTATGAAACTAGTGTCTAAACACACACACACACAACAAAACAATCACTTTGGAAAACATAGCTTTAACACTGATTTTGTTTCCTATTTTAAAATGCTGAAGAGTGAAGTCCCAGCCTCAATGTTGTAGGAAAGCTTTGATGCATCTGTAAATTGTAATGCACTCTTTCATGATATATTTTCAAAATCACTGGAAAGTTGTTATACAAGAGAACTATACTTATGTATTGTAAATAACATGAAAATACAGATATTAATGCCAATAGTTCAACAATATGTAATCTAAGGTGCTCCATACTATATGAAGTGTGAGTTAATTACTCATAATTAAGTTGCAAAGGTCCTATTATATATTTATAGACACATTAAAATGATCATAATTACAAATACTATTTCTTCATCACTTGAGTTTTAGACTGATTAATATCTGGGTGGGGTTCAAAAGAAACTACATTCTCTGCATTTATAAAAGTTTAATTTAAATATTTATATTTTAGAAAAATATATTTGAATAAAATCAATGCATTTTCTGAATTAAAATGTTATTAGCAAGAAATAGAAAATTTTACTAAGAAATGTGTATATAAATCATTTTTCTTCTTCAAAATTAAATTGTATCATATCAGAGTGGCTATGATGAATCAATTCAAATACTCATTTTTTTCTCCTTCAATTTGAATTCAACAAGTTACTACTTCACACTGTAGATTTTAATCTTGTCTTGATGTGCATTATGAATGATGTGAATAACACAAACTCATACATCTGGATCATACCTGGGTACAGACAGCGAATCAACTGAGTCATTTTGGGGGATTTGTTTTTGTCCAGTTCCCTCTGTGATCAACTGTCTCATATTTGAATTGATGAATTATTAAATTCACAATGTCTGTTCTTTTAGGTGCAAACCAACTCCAGTGAATGATGTCTTAAACTACACTTGGAGGGAGGGAAGCTGCCCAATTGTTAATTAGGTGAGCCCTTTGGTGTGGTGACGTAGCTCTAAACCATCCCATGGGAATTTAAAGAAAACCAACAGGAATACAGATATCAAGTTTCTTTTTCTGCCTTGACTAAGTAGGAGAAACAAAACTATACATCTATTTTAAAAACCAT EMBV3_02512 AGAGTCCCTGAGTGAGTTTTTTGAGATGCTGCCTTCCAGCGAGTTCCAGATCAACGTGGT Gene GeneID:520351|NXT1:NM_001075805:38_cdna Constitutive 1 NULL GeneID:520351 13 GENE NXT1 NULL NTF2-like export factor 1 EMBV3_15885 GAAGATGAAGGTAGAACACATCTGGCTTCAGAAATGGTATGGAGGAGTAGCCGACATCTC Gene GeneID:618618|CREG2:XM_002691175:5_cdna Constitutive 0 NULL GeneID:618618 11 GENE CREG2 NULL cellular repressor of E1A-stimulated genes 2 EMBV3_24179 AACAAGTCCAACGAGGACCAGTCCATGGGCAACTGGCAGATCAAGCGCCAGAATGGAGAT Gene GeneID:404144|LMNA:NM_001034053:49_cdna Constitutive 0 NULL GeneID:404144 3 GENE LMNA MGC127505 lamin A/C EMBV3_05578 TGGTCCTCACCGTGGTGTCCTGGATCTTACGTAGAGGATTCTCTCTACTCTCCCGGACTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30358 GCCATTGAGTCCTGTTGAGTTTTGCTCATGTGGTTTTGTCCCCACCATTATGGAACTGTG Gene GeneID:615506|MOSC2:NM_001076380:104_cdna Constitutive 0 NULL GeneID:615506 16 GENE MOSC2 MGC140221 MOCO sulphurase C-terminal domain containing 2 EMBV3_43437 CAAACAGCGGGACTTCAACCAGAACTTCATCCTGCTAGTGGGGTGGCGGGACACCCCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34662 TTGCTCCTTTTCTTAGTTCTTGGAGGTAGGCAAGTCGTATTCCCACAGGCTTCTCCAGGC Gene GeneID:788353|LOC788353:XM_002685609:253_cdna Constitutive 0 NULL GeneID:788353 2 GENE LOC788353 NULL similar to Uncharacterized protein KIAA1522 homolog EMBV3_32992 GCCACCAGTTATGCCAGGAATGCCACCTGGAATGATGCCAATGGGTGGAATGATGCCACC Variant GeneID:505177|ZNF207:NM_001035268:209_cdna 697^744 1 EMBV3_07430 GeneID:505177 19 GENE ZNF207 MGC128666 zinc finger protein 207 EMBV3_13608 GAAGGTGTCAGACCATGAGGTCCTCGCAGGGTACACGGGCCATAAGAACAAGGAGTATAA Variant GeneID:780845|WDR83:NM_001079650:53_cdna 562^738 1 EMBV3_33050 GeneID:780845 7 GENE WDR83 MGC140753 MORG1 WD repeat domain 83 EMBV3_04219 GGACCTAGCTCTTTGCAGTATGATCCTTACTGAAATGGAAACTCATGAGGATGCATGGCC Gene GeneID:535498|BAZ2B:XM_002685347:213_cdna Constitutive 0 NULL GeneID:535498 2 GENE BAZ2B NULL bromodomain adjacent to zinc finger domain, 2B EMBV3_00353 GTGGCCATCTGTAACCCACTTCGCTATGAAACTGTTATGTCCCAGAGAGTCTGCAGTCAA Gene GeneID:782866|LOC782866:XM_002693710:404_cdna Constitutive 0 NULL GeneID:782866 15 GENE LOC782866 NULL similar to olfactory receptor Olfr987 EMBV3_37477 CTCCATCAGTGCCGGTGGCTGCATCTGTGGTCTCTTAACCGCTTTCTTTTTATTATAGCC Gene GeneID:515249|CKAP2:NM_001098032:103_cdna Constitutive 0 NULL GeneID:515249 12 GENE CKAP2 MGC148979 cytoskeleton associated protein 2 EMBV3_38100 AGCACCAGGGTTCTAATGGGAGAATGGTACTTGGAGATGAGAAATGGGCCTGGCTAGAGC Gene GeneID:281301|MCAM:NM_001110062:28_cdna Constitutive 0 NULL GeneID:281301 15 GENE MCAM NULL melanoma cell adhesion molecule EMBV3_22295 TGTACACCTACCATCAGTTTGTGGAGGCTGCTAAGCTGACCTGTGAGAGAGGCTACCATG Gene GeneID:616412|FRMPD1:XM_002689721:59_cdna Constitutive 0 NULL GeneID:616412 8 GENE FRMPD1 NULL FERM and PDZ domain containing 1 EMBV3_16073 GGAAGAAAGAACACTACCACTGCAACATTATCGGACGCTTGAAGCTGTGCAGAAGCGCAG Gene GeneID:507624|MAP4K3:XM_002691291:383_cdna Constitutive 0 NULL GeneID:507624 11 GENE MAP4K3 NULL mitogen-activated protein kinase kinase kinase kinase 3 EMBV3_08209 TCGTGACCGTCACTATCAATGGAGATGACGCTGAAAATGTAAGGCCTAAGCCAAAGCCAG Gene GeneID:614149|NUDT5:NM_001076314:14_cdna UTR3_Alt 4 NULL GeneID:614149 13 GENE NUDT5 MGC140268 nudix (nucleoside diphosphate linked moiety X)-type motif 5 EMBV3_06576 AGTACTCCAACGAGGATACGCTCTCCGTGGCGCTGCCGTACTTTTGGGATCACTTTGATA Gene GeneID:326581|EEF1G:NM_001040487:13_cdna Constitutive 0 NULL GeneID:326581 29 GENE EEF1G MGC127923 eukaryotic translation elongation factor 1 gamma EMBV3_13081 TGATCACTCACCTAGAGCCAGAAATCCTGGAGTGTGAAGTCAAGTAGGCCTTAGGAAGCA Gene BVV0101_075031 + 1 EMBV3_01422 GK000003.2:49225715-49392813 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166765 TCONS_00197742 TCONS_00218274 TCONS_00139137 TCONS_00135762 TCONS_00210080 TCONS_00009527 TCONS_00153865 TCONS_00174045 TCONS_00177366 TCONS_00178988 TCONS_00142407 TCONS_00022599 TCONS_00218276 TCONS_00188922 TCONS_00020502 TCONS_00108328 TCONS_00168787 TCONS_00199862 TCONS_00229762 TCONS_00189172 TCONS_00137108 TCONS_00116491 TCONS_00254894 TCONS_00130890 TCONS_00098773 TCONS_00233768 TCONS_00029762 TCONS_00254888 TCONS_00229954 TCONS_00251157 TCONS_00072967 TCONS_00090494 TCONS_00100004 TCONS_00174047 TCONS_00124450 TCONS_00007111 TCONS_00141382 TCONS_00010491 TCONS_00154504 TCONS_00233467 TCONS_00110405 TCONS_00254319 TCONS_00152757 TCONS_00079500 TCONS_00208891 TCONS_00032442 TCONS_00107767 TCONS_00108677 TCONS_00093622 TCONS_00129690 TCONS_00107618 TCONS_00031148 TCONS_00029718 TCONS_00109794 TCONS_00067021 TCONS_00221660 TCONS_00148150 TCONS_00049295 TCONS_00197267 TCONS_00116868 TCONS_00176068 TCONS_00142520 TCONS_00193505 TCONS_00040840 TCONS_00247351 TCONS_00199772 TCONS_00197087 TCONS_00180497 TCONS_00048090 TCONS_00067030 TCONS_00139138 TCONS_00219110 TCONS_00189178 TCONS_00253648 TCONS_00032866 TCONS_00232810 TCONS_00187311 TCONS_00197959 TCONS_00099649 TCONS_00197502 TCONS_00070832 TCONS_00029961 TCONS_00179385 TCONS_00250433 TCONS_00198856 TCONS_00020727 TCONS_00020118 TCONS_00139133 TCONS_00187671 TCONS_00040676 TCONS_00111243 TCONS_00174046 TCONS_00243312 TCONS_00154276 TCONS_00072626 TCONS_00096681 TCONS_00078522 TCONS_00169278 TCONS_00049620 TCONS_00056972 TCONS_00206548 TCONS_00040374 TCONS_00083376 TCONS_00044803 TCONS_00056666 TCONS_00178327 TCONS_00165087 TCONS_00070115 TCONS_00154456 TCONS_00088346 TCONS_00139140 TCONS_00079056 TCONS_00188448 TCONS_00019107 TCONS_00176171 TCONS_00029761 TCONS_00251060 TCONS_00137316 TCONS_00247350 TCONS_00006522 TCONS_00122302 TCONS_00232255 TCONS_00006772 TCONS_00235438 TCONS_00231796 TCONS_00092010 TCONS_00162507 TCONS_00008734 TCONS_00108256 TCONS_00091823 TCONS_00179444 TCONS_00141391 TCONS_00180081 TCONS_00129756 TCONS_00064321 TCONS_00108035 TCONS_00025135 TCONS_00039827 TCONS_00081014 TCONS_00148962 TCONS_00175103 TCONS_00067031 TCONS_00021829 TCONS_00099433 TCONS_00152030 TCONS_00122054 TCONS_00019021 TCONS_00109954 TCONS_00086569 TCONS_00188029 TCONS_00054167 TCONS_00251933 TCONS_00222321 TCONS_00239619 TCONS_00109902 TCONS_00062813 TCONS_00218275 TCONS_00240553 TCONS_00124533 TCONS_00186091 150 XLOC_101601 XLOC_119403 XLOC_131667 XLOC_084810 XLOC_081985 XLOC_128591 XLOC_005082 XLOC_093627 XLOC_104507 XLOC_107140 XLOC_108761 XLOC_086832 XLOC_013269 XLOC_114963 XLOC_011177 XLOC_064236 XLOC_103183 XLOC_121514 XLOC_139256 XLOC_115211 XLOC_083318 XLOC_070658 XLOC_157826 XLOC_079596 XLOC_059017 XLOC_143249 XLOC_016019 XLOC_157820 XLOC_139448 XLOC_154100 XLOC_044735 XLOC_055275 XLOC_060247 XLOC_075997 XLOC_002673 XLOC_085810 XLOC_006042 XLOC_094264 XLOC_142949 XLOC_066309 XLOC_157253 XLOC_092522 XLOC_048385 XLOC_127403 XLOC_018682 XLOC_063677 XLOC_064582 XLOC_057197 XLOC_078403 XLOC_063528 XLOC_017397 XLOC_015977 XLOC_065698 XLOC_041343 XLOC_134973 XLOC_090033 XLOC_029426 XLOC_118929 XLOC_071034 XLOC_105847 XLOC_086945 XLOC_117497 XLOC_024654 XLOC_151307 XLOC_121424 XLOC_118751 XLOC_110264 XLOC_028222 XLOC_132429 XLOC_115217 XLOC_156587 XLOC_019102 XLOC_142293 XLOC_113359 XLOC_119618 XLOC_059892 XLOC_119163 XLOC_042609 XLOC_016216 XLOC_109158 XLOC_153376 XLOC_120509 XLOC_011402 XLOC_010796 XLOC_113716 XLOC_024492 XLOC_067143 XLOC_149975 XLOC_094036 XLOC_044394 XLOC_058032 XLOC_047410 XLOC_103329 XLOC_029751 XLOC_034775 XLOC_125070 XLOC_024190 XLOC_051245 XLOC_026271 XLOC_034469 XLOC_108100 XLOC_100409 XLOC_042140 XLOC_094216 XLOC_053133 XLOC_047941 XLOC_114491 XLOC_009787 XLOC_105950 XLOC_154003 XLOC_083526 XLOC_002085 XLOC_073857 XLOC_141741 XLOC_002334 XLOC_144232 XLOC_141284 XLOC_056778 XLOC_099388 XLOC_004291 XLOC_064164 XLOC_056594 XLOC_109217 XLOC_085819 XLOC_109851 XLOC_078469 XLOC_039045 XLOC_063945 XLOC_014679 XLOC_023644 XLOC_049896 XLOC_090840 XLOC_104886 XLOC_012502 XLOC_059676 XLOC_092240 XLOC_073610 XLOC_009702 XLOC_065858 XLOC_052184 XLOC_114072 XLOC_031976 XLOC_154874 XLOC_135630 XLOC_146284 XLOC_065806 XLOC_037540 XLOC_147217 XLOC_076079 XLOC_112144 Coding TCONS_00174046 XLOC_104507 Coding Coding ACOT11 3:92272943-92301505 j TSS129250 2521 3 TCONS_00174046_1 173 0.621975406584689 6 0.911942859143587 0.00313852133306947 0.00241231307203616 0.00230883940516261 0.00159272568936213 0.00165674058503331 0.00100103160310711 0.00134173782270352 0.0012934930535564 0.00180587561802444 0.0026758852678101 0.00171937966131285 0.00160249265132579 0.000709789345247976 0.00254066937106549 0.00190086311249893 0.0184614017106363 0.00807425195500976 0.0153722935871053 0.00358905129998192 0.00352117986384747 0.0015838623582098 0.00702937393908806 0.00496394307860696 0.00695674420836092 0.00286775024648844 0.00389072437791536 0.00373749856577436 0.00284008752174211 0.00233302416593925 0.00532492302341169 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 4475 100.00 0.983736612455375 XM_005270732.1 ACOT11 PREDICTED: Homo sapiens acyl-CoA thioesterase 11 (ACOT11), 0.0 774 90.05 0.225704085680286 TCONS_00174046_1 sp|Q8VHQ9|ACO11_MOUSE ACO11_MOUSE Acyl-coenzyme A thioesterase 11; 1e-108 327 92.26 0.965317919075145 1 coding 0 0 0 0 -0.00915018249092775 0.944016596621234 -0.0217543626755451 0.647572856388768 GCCTCAGATTTACAGCATACTTCAGGGCTGAGCCAAACCAGGGCCTGGCCTCCGTGTTCTCCAACCGCACGTCCCGGAAGTCGGCCTCACGCACTGACAGCGACAACATGGCAGATGGCGAGGGCTACCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGTGCTGCCCTGCCACACCAACCAGCGTGGCGAGCTGAGCGTCGGGCAGCTGCTCAAGTGGATCGACGCCACCGCCTGCCTGTCCGCGGAGAGGCATGCAGGGTGCCCCTGTGTCACAGCCTCCATGGATGACATCTATTTTGAGCACACCATTAGTGTTGGACAAGTTGTGAATATCAAGGCCAAGGTGAACCGAGCCTTCAACTCTAGCATGGAGGTGGGCATCCAGGTGGTCTCCGAGGACCTGTGCTCTGAGAAGCAGTGGTGTGTGTGCAAGGCCTTAGCCACCTTCGTGGCCCACAGGGAGCTCTCCAAGGTGAAGCTGAAGCCAACTGTGCCTCGGACCGAAGAGGAAAAGACGGAGCACAGTGTGGCGGCCGAGCGCCGGCGCATGCGACTGGTCTACGCAGACACCATTAAGGACCTCCTCGCCAACTGCGTCATTCAGGATGGTGAGCGTCATGGGTAGGGAGGGCAGCTCGTGTCCTACATGCTCCCCTCTGTCTGGGGCTCCTACTGGGCAGAGAAAGGAAGGAAGTCTCCCTGGAATATCCACCCAGTGATGGCCTCAGGCCTGGATAACACTCTTGCCTCAAGGTCCCTTAGTGGGGAAAAGGGAGCATTTGGACCTCTCGCCCAGCTCCCAGGAGCCATGAAGATGAAGCTGGGACACATAGAAAACAGTTTGTCATCCACTAAATGCATTTGGGTCTCTAGGAGTCAAGGTATTTGGGAAGGTAGTATTGAGCTTGGCCTTGAGGACCCTCAGTTCAGTCGCTCAGTCATGTGCAACTCTTTGCGACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAGCTCCTGGAGTTCACCCAAACTCATGTCCATCGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTTGTTCCCTTCTCCTCCTGCCCCTAATCTCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCCCATGAGATGGCCAAAGTATTAGAGTTTCAGCTTTAGCATCAGTCCTTCCAAAGAACACCCAGGACTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACTACAGTTCAAAAGCATCAATTCTTCGGCACTCAGCCTTCTTCACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCCTTCCAAGGAATAAGCATCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCCAAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCTATGAAGTGATGGGACCAGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTCACCTTCATCAAGAGGCTTTTTAGTTCCTTTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATAGTCCTCCCGGCAATCTTTATTCCAGCTTATGCTTCCTCCAGCCCAGCGTTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAACATACAGCCTTGACGTACTCCTTTTCCTATTTGGAACCAGTCTCTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATATAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGATATTCCCATCTCTTTCAGAATTTTCCACAGTTTCTTGTAATCCACACAGTCAAAGGCTTTGGCATAGTCGAGAAAGCAGAAATAGATGTTTTTCTTGAACTCTCTTGCTTTTTCCATGATCCAGTGGATGTTGGCAATTTCGTCTCTGGTTCCTCTGCCTTTTCTAAAACCAGTTTGAACATCAGGAAGTTCACGGTTCACGTATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCAGTCGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGAAATGAAAACTGACCTTTTCCAGTCCTGTGACTACTGCTGAGTTTTCCAAATGTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCGTCATCTTCTAGGATTTGAAATAGTTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTTGTAGTGATGCTTTCTAAGGCCTACTTGACTTCACATTCCAGGTTGTCTGGCTCTAGGTGAGTGATCACACCATCATGATTATCTTGGTCATGAAGATCTTTTTAGGACTTAAAAAAAAAAAAAAAA EMBV3_04420 CATCCTCTTTGGCTCTCTGGCTGTAGGATCTGGGCTTTCCTCGCATAGAAGTCTTCCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04329 AGTGATTGCCGAGGATGAAGACTGCCCCATGTCCTTAGTGACAACAGCTAATCACAGTCC Gene GeneID:505502|FOXP2:XM_002686788:128_cdna Constitutive 0 NULL GeneID:505502 4 GENE FOXP2 NULL forkhead box P2 EMBV3_30480 ACCTTGTTTGTGGCCGGCTGCGGGAAGTTCTATGAAGGGACAGCGGATGAGATGTACAAA Gene GeneID:509274|HAGH:NM_001035274:111_cdna Constitutive 1 NULL GeneID:509274 25 GENE HAGH MGC128610 hydroxyacylglutathione hydrolase EMBV3_26892 CAAGGGAAACAGGCCCCTTTTGGAGACCATTAGAGCAGCATGTATCTGTTAAATACTTGG Gene BVT0102_233350 + 0 NULL GK000030.2:58638204-58650158 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41032 AAAACTCCTGTGTGGTCCATCTCCACGTTCCAGTTCTCTGGTCCAAGTCCTGTAGGATCT Gene BVV0102_387970 + 0 NULL GK000004.2:96078949-96266936 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09491 CTTCATCAAGAACCTGGGCAAGACCATCGACAACAAGGCTCTGTACAACATCTTCTCGGC Gene GeneID:521086|LOC521086:XM_002700006:42_cdna Constitutive 0 NULL GeneID:521086 X GENE LOC521086 NULL similar to poly(A) binding protein, cytoplasmic 1-like 2B EMBV3_38434 CAGGGAAACGCAAAGCCTTCTCCACCTGTGGCTCCCACTTTACTGTGGTCATCCTGTTTT Gene GeneID:509073|LOC509073:XM_002691549:7_cdna Constitutive 0 NULL GeneID:509073 11 GENE LOC509073 NULL similar to olfactory receptor 355 EMBV3_10860 TCCTTGCCTCAGGCATTTCTATCAGACCCCTGGTCCCAGAGCCCCAGGTTTTCTTGCAAA Gene BVV0102_184979 - 1 EMBV3_41036 GK000007.2:41780370-41790196 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216694 TCONS_00216696 TCONS_00216698 TCONS_00216695 TCONS_00216697 1 XLOC_131297 Coding TCONS_00216695 XLOC_131297 Coding Coding LOC509006 7:41787545-41806517 j TSS161550 4649 1 TCONS_00216695_6 388 0.166702516670252 9 0.755416161509673 8.19542365338405e-07 3.0722339417857e-10 2.70782672275534e-05 6.02511372184612e-22 1.71140725768159e-41 1.17418834754981e-10 1.68185953003338e-09 1.81826162432839e-10 0.000122801657690037 3.27235272224362e-12 2.1536896724454e-09 7.5244473131449e-10 1.0763326395117e-09 1.45537049668971e-10 7.96505686412145e-11 0.00163969100494807 0.000252690775162606 0.000162644622478541 5.73832277650418e-07 1.6481149435535e-05 9.19141273911035e-11 1.69110325215332e-09 0.000429375719323556 1.13076973207955e-07 2.27741391289542e-10 3.88105140986924e-12 7.68172107517946e-11 1.52025824503281e-06 1.48249747395977e-06 2.75647408820049e-09 XR_235239.1 LOC509006 PREDICTED: Bos taurus class I histocompatibility antigen, Gogo-C*0101/C*0102 alpha chain-like (LOC509006), transcript variant 0.0 6381 100.00 0.760808776080878 TCONS_00216695_6 sp|P13746|1A11_HUMAN 1A11_HUMAN HLA class I histocompatibility antigen, A-11 alpha chain; 3e-81 257 42.90 0.762886597938144 2 coding 0 0 1 1 0.0755008483553342 0.473785507578673 0.00291117824744021 0.968386187355681 CCAGCCGGAAGTCTGAACCTGAGCCAGGATGTGGTCGCACCCTCCGCGGCCCAGAGGGAGCTGAGCGCTCACCCGCCAGGGACCCGGGAGCGGACGCGGCCGGCGTTAGCACAACTGAAGGCGCCCCCCCCCCCCCCGGGGACCGGCGCCCTCGGGCGGTGCGTGAGGCTGGCGACCATGTGGCTTCGTAGTTCCGGGAGTGCGCAGCACCCGCGGCCGCCGCCACCACCATCACTGCTGCGGCTGCTGCTACTGCTGTCAGGACTGGTGCAAAAGGGAGCGGCAGAGAGTCCCTGGGGGTTGCCCTCGGTGGCCGATGGCCCAGCTTCCATGGCAAAGGTGGTGATGGCAGAACTGGCAAACCTGAAGTTGGAAAACAAGTCATGGCCTAGAGGGACGCACTCCCTCCGCTACCACTACCTGGACCTGTCAGAGCCGGACCCGAGCCTCCCTAAGTTTCAGGCTGTAGGCTACGTGGATGATCAGCCTTTTATCCGGTATGACAGTCGTGTGGACAAAGCTGAGCCCCAGGCTCCATGGATTATGCCCATGAATGCCAAGTACTGGGAGAAGGAGACCAAGAAGCAGAGGAAATGGGCAGAGCTTCATCAGGTGGAGACATGGAGAATGATGGGCTACCACAACCACAGCAGCGGCATGCACAGCACTCACCGCATGTTTGGCTGTGAGATCCAGGAAGATGGCCACTCCAACAGCTTCTGGCAGTTTGGCTATGATGGGCAAGACCACGTGTCACTGGACATGGAAACTCTGAGTTGGGTGTCAGCTAACCCCGTGGCTCTGTTGACCAAGCGTAGAATGGAGACAGAGCACTGCTATGCTGAGTACAACAAAGCCTACCTGGAAGGCCCCTGCCTCGCCTCCCTGCGCAGATACCTGGAGCTGGGAGGCCAGAGATTCACCCGGAGAGAACCACCCACAGTATGGGTGACAAAGCACTCAGCCCAGGACGGGGGTACCACCCTCAGGTGCTGGGCCCTGGGCTTCTATCCACAAGACATCACACTGAGCTGGTGGCTGGGTGAGAAGAAGTTGAATTCAAAGCTTGAGTATGTGGAGGCACGCCCCAGTGGAGATGGCACCTATCAGACGTGGATGGCCGTGTGGGTGCCGGCTGGAGATGAGACCCAATACACATGCCACGTGCAGCACTGCAGCCTGAATCACACACTCACTGTGTCCTGGGAAATGCCCTCTCATCCAGGACTTACGGCCATGGTTATCTCTCTCATCCTGATCTTGCTGGTGTTTGGTGGTGGTGTGAGTTTGACCAAGTGCCTTCAAGCCAGGAATAAGGAACCTTACGAGCAACCCCCAGGTTAAGAGGACCCCCATAATTCTCAAAGCCCAGCAAGATCAGGAGCTGCTCAACTCATCTCCTGACAGAAGTCACTGTCACAGATCAAGGAAGTGTTTTGTGGGGTGTTAGGGGGCCTGAAGGCCTCCTGCCGTCTAATTATTTCTGTCTTGGGGGGTGGGAAGGGGGGGCAGTAGTAATCCCTCAGGTCCTCTTACACTTGACATTTTGCAGAGTGATTTCATGTTAATTGTAAATACCACTTCAGCTTCTCAGGCACTCTATGAGTTTGACAATGTTACTCTTATTCCCACTTGCCCAACATGAAAACCAAGGGTCTGGGCAGTCAGGGAAAAACCCGAAAAATATCCAAGAGTTATAGCGGCAGCATCATGTGTGAAGCTGCTAGCATCAGAAAGAAATGGCTGAATGCCTGCCTCTTTCATAGGTGTGTTCTGTATATATGTATGATCTCCTTTTGTATAGATTAGAGTGTTGGGTGTGTGAGGGTATAGGGGAGGCAGTAAGGGTAGGTGTGTGAAACTGAGGAGGTGTGTTAAGGTGAGGATGTGTGGGTGTGTATGTTTGAGGGTGAGAGGATATATGGGGTGCATGTGAGGGTGAGTGGTATGTGTGGTGTGTGGTATTCTTTTGTATTTGAGGAGAAGCTCAGAAGACAGGTACCTGGAGACCTGTTAGTTAGTCCCAGGCAACTGAAGGTTGGGAAACAATTCAGTTTCCCTATGTCCTATCCTTTTGAACGGTTGAATTTTTACAATAGGCACAGGTTACTGTTACAGTAAGGAAAGACCCCTTTTCTCTATGTCATGTGAAAATGCCTATGAAGGATATGTCTGGAGAAGGCCCAGCCTCACCTTTGCATATTCAGTGGAGCAGAAACCCCTTGTCCCCTCAATGAACAAGAATCCAATCTTAGGGCCATTTGATGTGCCAGCAGCTGGGACTCCAGAGCCAAGGCAGAGAGATAGCGTGCTCCATTGTCATAAAGGACACAAGGTCAGACCCCTTCCAGAGCACCCTCTGCCTCCCCTTCAGCTGACTCCAAAGTGTGACAGAGCCTCCTGTGGGGAGTTTGAAACCTCTGTGTCTATAGCCCTGGGAGGCCCAAAGGCCAAGGATGTGAATGATTGTAATACTAGAAAAAGACTCAACCTGCCCTGGTGGCCTGTGGGACCTAAGCAGTGAGCTTGTAATGACTGACTTGTACTGAAGACATGTCTTATATGTCTGTCTTTCTCACTGATGTTGTCATGCCCCATATATGCTGTGCAAACCACTTACTAAGCAGAGTTCTAAGCACTTTATTACATGTTAGTTGCTCAGTCGTGTCCAGCTCTGTGAGACCCCATGGACTGTAGCTCACCAGGCTCTTCTGTCCCCGGAGTTCTCCAGGCAAGAATACTGGAGTGGATAGCCATTCCTTTCTCCAGGGGATCTTCCTGACCCAGGGATCGAACCTGGGTCTTCTGCATTGCAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCCTTTATTTTATACTTTATTGTATTCTAAGCTGTTTAATCTTCCAAGCATGACTGTGAGGGGGAATTAATACTCCTGTGGTACAGATGAGGAAACTGAGGCCCAGGGTCCCACAGCTGATTCATGCCAGAGCTAGGATGTGAGGACTGCTGCAGCCTGGCCACCTCACCACTGCACCAAAGCCTCAACAATAACTGAGCTGTTCTGTAAATGGGCAAAAATATTGATTTGGGGGATTATTAGATGTCACCCCAGACATCTCTGGTTGCTGCTGCTAAGTCGCTTCAGTCATGTCTGACTCTGTGCGATCCCGTAGACGGCAACCCACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCTATGCATGAAAGTGGAAAGTGAAAGTGAAGTCGCTCAGTGTCCGACTCTTAGCGACCCCATGGACTGCAGCTCACCAGGCTCCTCCGTCCATGGGATTTTCCAGGCAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCATTATATAATATTCAGCATTCACATCTTGGTATCTTTCTAAAGCCTAAAGAATTCTAAATTCTAAACTATATCCGACTCTAAGGGTTTTGGGTAAGGGATTGTGGACCTGTATTAATAAGGTTTTGTGGTAATAAACATGTTTTATTTTTTCAGTTCTCTGGCTGTATGGTGAGATGAGTTATAACAAAGGTCAGGTCTGGTCCCCAGCAATGGGAGGCACAAGTGCCCAGGTGGACCCTCAATGCTCCCTCAGCCCTGGGTACACTTAGGGCCTCCTGAGAAAAAGTGGAAGTTTCTTCTCTGGGGAAGGAGTAGAGGCAGAACGTTTTTGGGAAGAAGCAGATAGAAGGAGGCTTCTGATTAGTCTTTCTCTCTTTAAATTGGTATAGCCTGGTCACCCTTCTGTACCCCAAGGTTATGGGGGTTCAGGTTCCTCTATAGACCCTCCAGAGCCACCTCCCAGTTTTGATCTCACCCAACCAAGTGTAGCCCTTAGACTGACAATCTGCATGGCTTCTTTGATGCAAGGAGGTGGTATATTCAGGGAGTCTTAGATATAGGGTCTGGCTTCTGTAATTATGCACTGGGCAGAATAGGCTGGAAGTTCATGTCCAGTTCTGGGCTTCCCTGTGTCTAGGACCCTGAATACTTCTGGGGCTGTGGAATTAAAGGGACAGAGAGGCCATAAACTAGAACAGTGCCATAAGAGCCCCTGTAGGACAGCAGCAGGGCCCCAAGCACCTGCCCCTTAAAGGTATGGTCTTTCCTTCTTCCATTAGCTTCATTGGCTAATTGGCTTAGAAACTGCCAGAGGGCAAGGGATGTGCAGTCTACATCTGTCCTGGATATCCATCCACAAACCCTGGTTTTTACACCTCACTGCCTTATCCTGCTGGTTCTACTCATTCTGTCCACCCAGCCTCTGATCTCCTCATCAGAACATAACATTTGCAAGAAAACCTGGGGCTCTGGGACCAGGGGTCTGATAGAAATGCCTGAGGCAAGGAGACAGCTGTTACACTGCCTACCCTGGCCTGAGGGGCCTTCCTCCCCTTTCCTGAGTCCCACTAACCCTTCCCTGGTGGAGTAGCCCCCACCCCAAACTTGACACCCCAGGCAGAACCTACCAGCCTTTTTGCTGCCAGTGGCACCACTGTCCTGATGTTCAAGAAGTGTGTGTTCCATAAACAGATTATGAAGTCTTTGGTAACTGGATCGCTTTTATTTTGTTTTAATCATACCTCCCTTATAGACTAGTTCAGTGTTG EMBV3_16698 AGCGGATCTCCTCATTCTGCAAAGGACACGATACACAGACCACCCTGCAGCCTTACTTCT Gene GeneID:508656|CD276:XM_002690495:452_cdna Constitutive 0 NULL GeneID:508656 10 GENE CD276 NULL CD276 molecule EMBV3_39602 AGGTGCGCGGGCGTGGACCCGCTGGCCTCGCATCTGGCATCCCTGACTCAAAGCTCGTTG Variant GeneID:614027|SIRT3:XM_002683729:14_cdna 133^554 2 EMBV3_19138 GeneID:614027 11 GENE SIRT3 NULL sirtuin (silent mating type information regulation 2 homolog) 3 (S. cerevisiae) EMBV3_14169 CTGAATACCCAAAGGATAAGCAGTTCTCAAGCCACTCAACCCCTAGCTACCCCAGTGGTG Gene GeneID:407231|MEF2A:NM_001083638:14_cdna UTR3_Alt 2 NULL GeneID:407231 21 GENE MEF2A NULL myocyte enhancer factor 2A EMBV3_00437 TTCATACCCTCGGGGCACTCTTGGTGAGAAGGGCCTGCACCACTTCACCTGTCTGTATAT Gene GeneID:319094|EDN2:NM_175714:35_cdna Constitutive 0 NULL GeneID:319094 3 GENE EDN2 NULL endothelin 2 EMBV3_08264 AGTATGGGGGTAGGGCGTACCAGAAAGGTGGTTATCTAATTTTTTACTGGACCCTAAATT Gene GeneID:520462|SH3BP4:NM_001144088:26_cdna Constitutive 2 NULL GeneID:520462 3 GENE SH3BP4 NULL SH3-domain binding protein 4 EMBV3_08405 TTTTCTGTTCTTGGGAGCCCAGACTGTTCGCCTCGGGGCAGGTGAAGTAGCTTGAAAACA Gene GeneID:512753|C3H1ORF212:NM_001098950:143_cdna Constitutive 0 NULL GeneID:512753 3 GENE C3H1ORF212 MGC159485 chromosome 1 open reading frame 212 ortholog EMBV3_29297 GGGAAAGATATGTATAAGAAAGGGAGAAAAGTGGTAGAGCCCCTCCATCCTTGCCCACCG Gene GeneID:506309|LOC506309:NM_001103088:8_cdna UTR3_Alt 2 NULL GeneID:506309 8 GENE LOC506309 MGC166209 hypothetical LOC506309 EMBV3_40976 TGTGCGACAGTGACTACAGCGCCAGCCGCTGGAAGGCCAGCAAGTACTACCTGGATCTGA Gene GeneID:534450|LRP5:XM_002699405:435_cdna Constitutive 0 NULL GeneID:534450 29 GENE LRP5 NULL low density lipoprotein receptor-related protein 5 EMBV3_20719 GGGATGTGCTCTCTCAGTAGGAAATAGAGCGGACAAGTAAGTGGGAGTGGGGACAAGCTT Gene BVV0102_041409 - 1 EMBV3_11305 GK000003.2:99429472-99446556 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03826 ACTTCCACGACGTTCAGGATTATGCAGACAACGAGCTCTTCCAGAAAGTCGCAGAGGATT Variant GeneID:617635|RAB24:NM_001034802:46_cdna 499^762 2 EMBV3_36097 GeneID:617635 7 GENE RAB24 MGC127026 RAB24, member RAS oncogene family EMBV3_21815 TGTCTGGACGTGGAAAAGGAGGAAAGGTAAAAGGAAAAGCCAAGTCTCGTTCGAGCAGGG Gene GeneID:100299831|LOC100299831:XM_002683953:2_cdna Constitutive 0 NULL GeneID:100299831 Un GENE LOC100299831 NULL similar to histone cluster 1, H2ad EMBV3_32967 TGGTACCTGTGCATCCTGCTGGGCTTCCAGGCTGCCGCTGTTCCAGGCCAGTGCCTTTGC Variant GeneID:505492|SLC23A1:XM_002689263:183_cdna 352^509 1 EMBV3_04372 GeneID:505492 7 GENE SLC23A1 NULL similar to solute carrier family 23 (nucleobase transporters), member 1 EMBV3_08445 TCCTTATTACAGAGCCACCTCGGAAGCCCTCTGGGCTGATTATTTTACTGTTAACCTGGG Gene BVT0102_166259 + 0 NULL GK000014.2:71101861-71396809 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053806 TCONS_00053807 1 XLOC_031829 Coding TCONS_00053807 XLOC_031829 NonCoding Coding - 14:71126540-71139273 - TSS39625 1611 2 TCONS_00053807_5 113 0.13780260707635 4 0.873782595036129 0.00113101845176348 0.00060506026982645 0.0008197306719489 0.000229773788969704 0.000416895164562629 8.64350889574093e-05 0.000230945845300469 9.94080086951204e-05 0.000605088682126429 0.000150356918220719 1.02169484333435e-09 1.90837437257221e-09 0.000103543813529863 0.00208370686942926 6.13653437604738e-05 0 0 0 0.000776021072535352 0.000902352394366549 0.00110353071002346 0 0 0 0.00020794029673564 0.000446640416191751 0.000224483548699322 0 0 0 XM_005215315.1 ST3GAL1 PREDICTED: Bos taurus ST3 beta-galactoside alpha-2,3-sialyltransferase 1 (ST3GAL1), transcript variant X1, 1e-58 232 84.23 0.135940409683426 0 noncoding 0 0 0 0 -0.156091642373863 0.339855599093517 -0.0271397933161065 0.573458567277065 GCTCTAGGCATGGCTTCAGATTTGTTTCCCAGCTCGTGTGTGTGTGTGAAGCTATAAAACAGGTTCCATGGCTAGCATGGCCCACTGTCTGGGGAAGAAAATCAGGTATAACTGTCCACTGACCTCCCTGATCAGATTTCCCTCTGCCATTCTCCACACACCAGATGATAATGGAGGGACTATGGACATTCTGGGGACCCAGCTAAGTGGAAGGAAAATGAGCTGTTGAGGGAGAAGCTGCACCTTGAAGGGCTGGTTTCGGCAGACTCCAGCCTGCCCCGAGTCAAAGCATGAAACCAGAAACTGAGATCTCTTCTGCCCTCGAGGAGAATAGATGTTGCTCACTCTGGGAACCTTGACTCTATGACTTTAATGGATTGCTCAATGTCTGGTATATACAGTTTTATGACTGCTATGCTTGTTGGACGGAAGGTCCCCATACATCAGCTCTCTCGTTTTTCTATATTCTTTCATTTTTAGTACTGCTCTTATTCCTTACTGAAATATTTTTATGAAATCTCTCTGTTCTCAACATTCATTCCATAAATGACCAGCTCCAAGGCTGGGCTCTACTAGCCTGCCTCTGTTATTCTTAGGACCTATCCATGTGGATTTTTGCCCCTTTTGGAACAAATCTGTTTCCCTAACAAATCTAATCGGGTTAGAATTCCCTCAAACAGCAATAGAACACATTAATGAATGCTAGATCTGTCTATGTTGTAGGAAGATTCAGTACTTTCTGAAGATGAAATCACTCAGCTGGAATTTTCTGATTTGAGAATGTCATTTTAAACACAGACCAAGGCTCTTGTATATATATGTTTCTGTTTAATTTCTCTGGACTGATCACGTGTGTGCGTGCATGCTCAGTTGCTCAGTCATGTCCAGCTCTTTGCGACTTCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGATTACCCCAGCAAGAATACTGGAGTGGGCTGCCATTTCCTCCTCCAGGGGAATCTTCCCAACCCAGGGATCAAACCCCCATCATCTATGGCTCCTGCATTGGAAGGTGGTTTCCTTATTACAGAGCCACCTCGGAAGCCCTCTGGGCTGATTATTTTACTGTTAACCTGGGTTACAAGTGCTTTTATATGAGGGATACGTCACTGTCTTTCTTGTTGATTAAATCAGGGGATCCTTTTCTGTATTTACCCCAGAACACTAAAGTAGTTGTGCCCATAGTAAGTCAAATAAAAACAATTATCTTAAGAAATGTAATCCCGAAAGACCCAATCATGTGAAGTCACAATTTCCTTTAACCTTTTGATCTGAGAGAGAATGCTTACCAGAAGGGCATACTGCCCAAGAATATAAGTATCTCATGGAAGAGTAAATATATGAAATCCTTTTGCACTTTCTGGTGAATTCATCTCTATTTGTTGTTCATTTTGACAACCAGTCATCCTGTTGTTTTTCCTCTGTGATGCTACTGATTTGAGCACCAAAAGCCCCGCATCTCAGGAAACCTCTCACTTGTAGGCAAACTAGCACAGTTGGTCATCCTATTCTTACCGAACAATTTTTAAAAAACGTCCTTTGTTATCCGATGATAACAGCACAAAGGGAAGCTAGATTTG TCONS_00053813 s 3' 265945 TCONS_00053813 s 3' 254535 EMBV3_06846 CCTTCAGGCCACTCGTTCATGTTGATTCTGGGAAATAGCCAGTTAAGACAGATAGCCTTG Gene GeneID:100140395|TAS2R42:XM_002687787:59_cdna Constitutive 0 NULL GeneID:100140395 5 GENE TAS2R42 NULL taste receptor, type 2, member 42 EMBV3_36859 CTCAGCCAGAGCACCATCTGCAGGTTCGAGTCCCTCACTTTGTCTCACAACAATATGATC Gene GeneID:532453|POU4F2:XM_002694331:43_cdna Constitutive 0 NULL GeneID:532453 17 GENE POU4F2 NULL POU class 4 homeobox 2 EMBV3_31575 GCCTCCCTCAAGAGTAACTACAACCACCCCATGCACAAGATGCTCAATACAGACCTTAGC Gene GeneID:507271|LOC507271:XM_002695617:4_cdna Constitutive 0 NULL GeneID:507271 19 GENE LOC507271 NULL similar to ribosomal protein L4 EMBV3_24147 ACTTTGCTTACTGGGCCTTTAGCTTCTGCTCCCTCTCAGCTTTTCCCCAGCTTCACCCTT Gene GeneID:407109|PDHA1:NM_001101046:58_cdna UTR3_Alt 2 NULL GeneID:407109 X GENE PDHA1 PDHA pyruvate dehydrogenase (lipoamide) alpha 1 EMBV3_43760 ATTCCTCACAGACCTCCTGGACAAAGTGTGCGAGCGGATGAATGACTACAGACTCGAAGA Gene GeneID:100336047|LOC100336047:XM_002687055:172_cdna Constitutive 0 NULL GeneID:100336047 4 GENE LOC100336047 NULL rCG56756-like EMBV3_04077 GGCTCAGCTAAGTCTTTCCATAAAGATGCTAAATCACCATCATCATCACCGTAACTGTCT Gene GeneID:516375|STRN3:NM_001098042:23_cdna Constitutive 2 NULL GeneID:516375 21 GENE STRN3 MGC151634 striatin, calmodulin binding protein 3 EMBV3_09976 GTCAGGGCCACAGCCATGTTCTACTTCCACCTGTGTCCCAGCTGTACCATCCGGCATTAT Gene GeneID:537848|LOC537848:XM_002686946:88_cdna Constitutive 0 NULL GeneID:537848 4 GENE LOC537848 NULL hypothetical LOC537848 EMBV3_14144 GCGTAGTGGAACATAGCGGCTCAATGAAAGGAGGTCACTACACCGCTTACGTGAAAGTGA Gene GeneID:540972|USP45:XM_002690164:37_cdna Constitutive 0 NULL GeneID:540972 9 GENE USP45 NULL ubiquitin specific peptidase 45 EMBV3_12760 ACGAACTGCTCGATGCCATGCTGGCTCATCCGATCCTCATTAATCGCCCGGTGGTAGTGA Gene GeneID:100336527|LOC100336527:XM_002683958:3_cdna Constitutive 0 NULL GeneID:100336527 Un GENE LOC100336527 NULL arsenate reductase-like EMBV3_02904 CTCCTGGGATCTGGCTTTCTCTGATTATGAATCCTCCAACCGCAAGTCCTAATAACTGTG Gene BVV0102_182364 + 0 NULL GK000013.2:48532766-48552756 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048790 1 XLOC_028921 NonCoding TCONS_00048790 XLOC_028921 NonCoding NonCoding - 13:48537958-48538552 - TSS35966 594 1 TCONS_00048790_1 47 0.518518518518518 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.89279908528553e-05 0 0.000443526280880284 0 0 0 0 1.54445303491442e-05 0.000508018614402208 0 0 9.86389718931774e-06 0 0 0 XR_226670.1 LOC101909530 PREDICTED: Bos taurus uncharacterized LOC101909530 (LOC101909530), 1e-59 233 95.24 0.245791245791246 0 noncoding 0 0 0 0 -0.195910027055967 0.159353253060668 0.0591179633834598 0.29779870547736 CCAATGCATGAAAGTGAAAAGGGAAAGTGAAGTCGCTTAGTCATGTCCGACTCCTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATAGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCTGATTTTTCATAATTAGATGAAATTATAGAAAAAAAAGATGATATAAATCTAAATTATCAGAAAAAACTCTGTGTTTCTTAGATCCTCTGTTGTCTATTTGACATCAATTATTCACAAGGCCAAACTAATGTCCAAAGCTGTTTACATCTCTCCTGGGATCTGGCTTTCTCTGATTATGAATCCTCCAACCGCAAGTCCTAATAACTGTGTTTCACTTCCTGCTCAATATAGGATGTCCTCACCTAACCACTTCCCACCACCACAGCAATAAACACCTAGGATTTCCCTTTGTTACCACCCCCTGACCGGCCTTGATGATTCACTCTGTGGCCCTTTGTGGTATGGTATTGCCCTTTTCTCTTGGGAAATGTAAGTAATAAATTCTTTCAAAGGCAGTTGTCTCATGTCTGTCAACTTATTCCTGTTTAAAATAAATCCCAGGCACAAAT TCONS_00042865 TCONS_00042866 TCONS_00042867 TCONS_00042868 TCONS_00042869 TCONS_00042870 TCONS_00042871 TCONS_00042872 TCONS_00042874 TCONS_00042877 . 3' 4439 TCONS_00042865 TCONS_00042866 TCONS_00042867 TCONS_00042868 TCONS_00042869 TCONS_00042870 TCONS_00042871 TCONS_00042872 TCONS_00042874 TCONS_00042877 . 3' 5032 EMBV3_26368 GCCAGAGGTTTAGCATCTTCTGTTAACATTTAGTCTCCATGAACATCACCTGAGCTAGTC Gene BVT0102_344289 + 0 NULL GK000030.2:5360520-5934612 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243670 TCONS_00243677 TCONS_00243678 TCONS_00243667 1 XLOC_150225 NonCoding TCONS_00243667 XLOC_150225 NonCoding NonCoding - X:5212389-5852495 - TSS183275 3267 1 TCONS_00243667_4 103 0.0927456382001837 7 0.994907085556276 2.52575797142466e-17 4.80760009283678e-06 4.59366318518469e-05 9.78893518499701e-05 0.000296695322010337 9.85990460475787e-20 1.26907550944988e-13 6.92534314156973e-05 2.1923311967645e-08 1.4995134090728e-10 2.96007509586973e-76 3.09917800403223e-09 6.28359933023528e-19 2.33080692254425e-14 7.54024231543515e-06 0 0 0 6.10605184937138e-15 0.000151598960517243 2.78806396263127e-09 0 0 0 8.96928912178433e-05 2.89711315206733e-06 8.79683773264917e-09 1.47690694380312e-21 1.21077318958868e-25 0 XM_001250601.4 LOC786134 PREDICTED: Bos taurus rCG48740-like (LOC786134), mRNA. 8e-34 150 67.42 0.149678604224059 XM_005268895.1 NAP1L1 PREDICTED: Homo sapiens nucleosome assembly protein 1-like 1 (NAP1L1), transcript variant X1, mRNA. 1e-25 123 71.64 0.0814202632384451 0 noncoding 0 0 0 0 0.0483293277155946 0.74848365950609 0.0354354807591471 0.451063413887718 ATAGAAATAAAGTGCACAATGAATGTAATGCACCTGAATCATCCCCAAGCCATCCGCCTCCTCCCTGGTCCGTGGAAAAATTGTCTTCCTTGAAACTTATCTCTGGTGCCAGAAACGTGGGGGACCACAGCTCTAGAGCATCTTTTGCCCCTTGATATTTTAGCCTTCTTTCAACAAAATAATCTGATGCAAGTTTACCAAAAGGTGAACAGGTAGCATTCCTAGAAGGTAGAGTGCTACAAAAACTGCTCTGCTAAGTACAAAATGAAGACAAGACGTTATGGACACCCCAGTGATGAATCACTTGTCTCCAAATTTCTTTTGATTTAAACATCAGTGCAAAGATCCTTAAAGAAGCTGACAGTTACTGAAGGTGGCTTACTGGAACCCTTAACCATGCACATGGTTCGGTTAAAAGTGCATTGTGTACTAGTGAGTACAAGAGACTACATTTCTACAGCACAATGATGAAGGCACAAGTCAAGTAAGCTAATTTGAAAACTGCTTCAATTGGTTTCTCAGGAAGGCTTTTAAACCACTCTTAGTTTGCAGTAAGGATTCTGATATTTTACAGCTGTCGGTGTATACCTATGACAAAAGTACTTCACGAGAACCAAACTATGGATGTTCAAGGATGCAGTAAATTATGTATCTGGCAGAAAAGTGAAGAAAGCACTGGTTTTAAAACCTTTTAAAAGCTGCTTATTAGGTACCTAGAAACTTTTTTTAAAAGAAGGTATAAGCAGTGCAGCGTATGTTCAAGCTATTCTCTAATGATCTTTAACGCCTTTGGCTCACTGCAGCTTGCATTCAAGAAAGTCATGTTTATTTTACGCTTCTTCTTCCTCTTCTTCTGGTTAATCATTTTCTTCCTCTTGCTTTGCTTCTTCTCTCTTGATTCTTCGCCTGTGTCATCGTCATCATTCTGTGCGTCTTGTCCTGTTGAGTAAAATACTGATCTTGTACACTCATGAAAGAAGAACTGCAATTGACCTTCAGGAATTTTACCTGTATCAACCCCACTTAGTATTCTAAATTTAGGAGTTTCCAGAGTACAAAAGTAGCTGAAGTATGAGTCCTTGAAAGTTGTTTTGTACCCTATTCTGGAAGTTCCATTTTCTTTGCTATCCTGTTCCTTAATGCATTCTGAGTGACATTGTTCTTCCAATGTATTTAGCACCCAATGCAGCCTATAACTTGTGGTCCGTGAGAACAGAAGGATCAAAATCATCCAGGTTTGACTTTATTAGATGTATTTCAGTCAACACCTCATTTGAGAAATAGTCACTGGATTCAGAGAAGTTCAACTGTGAAATTCATAGGCTCTCCAGCATCTGAGAACTTGCAGACAAGTATTACAGGTGCTCTAAAATAGGCTCATGGACTTTCTGAATCATATTTTTGAGAATTCTGCATTCTTCAAAACTTTCATGCCAAGATAAAGAATTCTTTCAGAGTGGCTTTTACCGTCAGACTTTTCCTCAAGTTTTCTTTTTAATTTCCTCAACAACTGCCTCCACAATACCTGGTTTCCTTTTATTTTCATCATCTGTAAGCTCATAAGATGATTTTGTATCTCTTATCATACAGGTTGATAGAGGCATACTTTCTCTCAGTATCATGAATTACTTTATGATGTTTAGATTTTGTTTTTGCCTGTTCTAACTGGAAGTTTCTGGGGCATTAAGTTGCTTAACGATATTAATCAAGTCCTGAAAACAGCTTACACGTGCTACAAGTGAAGCAGCACATCTTTCTTGGGAAGCCTGAGGAATTTGCCTCCCCTCAACAGTTTTTTCTTCCTTCCTGTTCTCAACAGCATGGTGCCCCTGAATCGTGGCACATTCCAGTCTCCGTGCCACAGACTCTGTGACAGAAAACAGTCTCCTGTGCACAGCTTAAGGGTCTTTTGCTTTCCCACCTCAGGGCCTTTATGTTCCTCTTGTGAACTACGAGGCCAAGTTGCTCAAGTGTCCTCCATCATCTCATTAAGATACACAGGCCAGGAGGGTGTGGGTGGGGAAAGATGGTGGGCAGCCCAAGGCACCGTAGTCTGTCTTTCTGGCCCCTTGAGGTGGGATCCCTCCACTGACTTTCAAGAGCTGCCTCCCCTAAATCAAAGTAAATGTTGAAAGGCTTCAACCCTCCCTTGGACACGACTGCCATCTTCCCCTCCTCCCTTCCATCCTTCACAGCACAGGCTCTGGTTGGGCCAGTAGAGCTGGTTTTATGTCACTTTCATCCAACATAAAACCTCCTTAAAAGCTCTGGCTGGGAAGTGGGGGCAGAGATGGATAAGCTGAGGCAGCACTCCAGCTGGGTTCCAGAATTGGCGTTAATGCTTACCAGGTGTTATGACTGTGCAATCTGATTTAGCTGTTCTGGGCCTGCGTTTTCTCATCTACAAAATTAGGTTTTTGGGTCCTTTCAAGTGAGAAGATTATCCAAGCCCTATTACTCAACCTTGGCTGCAAGTGGAAATGGAATCTTTGTCTTTTGAATGTGGCCTTGATATTTAAAAACAGCCCAAAGAGAGTGGCGGATTCTTTACCAACTGAGCTACTAGGCACATTTCAAATGCTCAGCAGCCACATGTGTCCAAATGCTCAATAATCAGAACACTGGATAGCAATGACAGAAGATTTCATCATCTCGGTTCAGTTTCACAGTACTGCCCTGGATTCCTCAAATGTAAAATGAAACTCCTGCCTACCTGCTGTTGAAGGATACCATGAAGAACAAAGGAGAGAATAAATATAAAAGCCTTTTGCAAACCCCAAAGCTGTGGATTCTTCAGCACTGAGCCACCAGGGGAGCCCAAAAGTGAAAATGTTAGCAGAAATGAAGAGAGATGATGACTAGCTCAGGTGATGTTCATGGAGACTAAATGTTAACAGAAGATGCTAAACCTCTGGCTTTCATGGTCTACTAGGAAACACAGATGAATGAATAAGAGAAATGACTCTGGCAACAAAGATTCTGGTGCTGAGAAACAAGAGTATGGTAAAAGTAAGTTTTGGAGAACTGGATTAGTTTCATGATATAAAAAAAAGTATTTCACTAACACAGGGCAATGTGTTTGGTGTCTGACTCACTTGGTAAAGAGATAACTTTCTTTGAAACCAAATGTTTGCTTTGGCAATTTTCACTTTTAAGTGGCAGAATTAAAATTGAAAGTTGAACACAAGCTCAGCAAATGTAACTCTCAGGGAGGAATGTCAGGACTAATTTTTATATGGATGCTGACTTTTAAAGATTGACTGTTTC TCONS_00246191 r 5' 152946 TCONS_00246191 r 5' 152946 EMBV3_29017 GATACAGGCAAGACTCCCGTGAAGCCAGACATGGCAATTCACCAAATTAGAACCACCCTC Gene GeneID:100297634|LOC100297634:XM_002687392:89_cdna Constitutive 0 NULL GeneID:100297634 5 GENE LOC100297634 NULL similar to ribosomal protein S20 EMBV3_34469 ATGTTAGAAGAAATATCCAAAAAGATACAGTAGCTGCTTGTCTCCTCCTATACCTGTCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20745 CCTAATGGGAAGACTCCATTTATAAACTATCCCATCAACTGTTTTTTCTTGCCCCGTGCA Gene BVV0101_082157 - 1 EMBV3_32038 GK000001.2:58166588-58169797 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003389 TCONS_00003387 TCONS_00000728 TCONS_00003393 TCONS_00003394 TCONS_00003391 TCONS_00003395 TCONS_00003390 TCONS_00003397 TCONS_00003388 TCONS_00003396 TCONS_00003392 2 XLOC_000854 XLOC_000187 Coding TCONS_00000728 XLOC_000187 Coding Coding GTPBP8 1:58152816-58169890 = TSS364 4284 1 TCONS_00000728_2 288 0.188608776844071 6 0.749428922860657 3.75984249068713e-238 0 3.69564677433058e-285 0 0 0 0 6.39171858092772e-53 3.13099251900106e-05 3.1430344353834e-05 5.02281766625548e-05 3.57859472825626e-84 5.03702466766559e-05 1.96572978571637e-05 5.62313556792764e-308 0.000654213715709454 0.000280117127916046 0.000255953795259961 0 0 2.00258097284952e-136 0.000282923879128172 0.000883484618274877 0.000212812587060543 3.00852368880174e-48 0 3.22787511598051e-06 0.000207560148452926 0.000218721588957107 0.00074496635752519 NM_001075828.2 GTPBP8 Bos taurus GTP-binding protein 8 (putative) (GTPBP8), mRNA. 0.0 1770 100.00 0.228758169934641 NM_014170.2 GTPBP8 Homo sapiens GTP-binding protein 8 (putative) (GTPBP8), transcript 0.0 1074 80.62 0.265639589169001 TCONS_00000728_2 sp|Q0P5E7|GTPB8_BOVIN GTPB8_BOVIN GTP-binding protein 8; 0.0 594 100.00 0.996527777777778 2 coding 0 0 0 0 -0.0111874881226952 0.916319723962194 0.0159814697122697 0.755584636834332 AGACTCTGGGAATGAGGTCCCAAGGTGTGACTTCTAAAAGAGGAAAATGGCAGCGCACCGGCTGCGGCAGAGCGTGGGCAGGCTGTTTGCGATGGGACCAGAACTGGGGAGTGGAAGACGAGCTTTCAGCGCGTTCCAGGCCTTCACGGAGGTTCTACGGCTGCCGAGCAAGCAGCTGACGAAGCTGGTCTTCCCGCTGGAAGAACTCCATGAGCATTTCGTCCCGGGCTCGAGGCCAGACCTTCACCTGAATATCTTCCACCCGAGCCTGGAGGACATCGCGCGGGCGGAGAGTTTCTTCACGGCCTCCGCCCGAAACCGCATCGAGTACCTCACCTCGGCGGTGCGTCTCGACCACGCCCCGGACCTTCACCGCCCCGAGGTGTGTTTTATAGGCAGAAGCAATGTTGGAAAATCCTCTCTAATAAAGGCTTTGTTTTCACTTGCCCCAGAGGTTGAAGTTAGAGTCTCCAAAAAACCGGGCCATACAAAGAAACTTAATTTTTACAAAGTTGGAAAATACTTTACATTGGTGGACATGCCAGGTTATGGCTATAGAGCACCTGAAGATTTCGTTGACATGGTAGAAACCTACCTAAAAGAACGAAAGAATTTGATGAGAACATTTTTATTAGTGGATAGTGTTGTTGGAATTCAAAAAGCAGACAATATTGCCATAGAAATGTGTGAAGAATTTGCATTACCTTATGTGATGGTATTAACAAAAATTGACAAACCTTCCAAGGGACATCTTTTAAAACAAGTGCTTCAGATCCAGAAATTTGTTGACACTAAAACACAAGGATGTTTTCCTCAGTTGTTCCCTGTAAGTGCTATGACCTATTCTGGAATCCATCTGCTGAGATGCTTTATAGCAGATATAACAGGAAATCTTAAGACTACTGGCTTCTAATTTAGTTGAAGATTCAAAATTGTTTGTGCCAACTGCAGTTAAAGACAGAATTTCAACATTGTTTTAAATGTTGTGTATCTGTAACTTGCAGAAGGATCACTTCAGCTTTAAAACCTGCATATGTCCAAAGGAAGAATGAATTTGTGCCTATAGGGGCAGAAAGGTTTATACATGATTGAGTTATGCTGTTCATTAGAAGAGATACCAGCAGTTTTTAACAAACTGACAAACAAGACCATATAGAAGTCCATAAAATGAAAATCTATTTCCTACCGTGTAGATGATAGAGTGTTAGTTACTCAGTCGTGTCTGACTCTTTGTAACCCTATGGACTGTATGTAGCCTGCCAGGCTCCTCTGTCCACAGCATTCTCCAGGCGAGGATACTAGAGTGGGTAGCCATTCCCTTCTCCAGGGGATCCTCCTGACAAGGGATTGAAGTTGCGTCTCCTGCATTGCAGGCACATTCTTTATTGTCTGAGCCATCAGGGTAGCCCCTACTGTGTGTAGGTGACGGTTTGCCATATTATTGGGTTTTTGTCTTTTAAAGGAATATCTATTACTCTATTTTTTTAAATATTACAATGCACTAGGTAAAAAGGGGCTACTTTTTTTGTTAAGCACTGATAGATGGGTTGAAGGTAAATTCTTATGTTGTTGTTCAGTCACCAAGTTGTGTCTTGACTGCCACCCCATGGACTGTTGCACACCAGGCTTCCCTGTCCTTCACTATCTTCCAGAGTTTGTTCAAATTTATGTCCATTGAGTCAGTGATGCTATCTAACCATCTCATCCTCTGCCACCCTCTTCTCCTTTTACCTTCAATCTTTCCCAGCATCAGGGTCTTTATATGTATGGCTATAACTTATCATTTTTTTGGAGACATCATTTGAATATAACAAAAATTATTCTTGATAAAATTTCAATCAGTCCATAATGGAAATACCACTTATTTCAGACTGAGGTCAGTCACTTTCACAGGGTTCAGAATCAGAAGACCAGAATTCAAGTTCCAGTTCTGGTACTTATTATACGTTGGATGTTTCTGAACTTCTTTTGTAACTCTACCTCAGAAGCTATGAAGATTAAAATATGAAAAGAACATCTATTTATTCTATATATTTGTAAAGCAAAACCAATTCAAGTATATAGCAAAACTCATGGGTAGATTTATCACAGAATACATCCTGTCATGGAGGAAGTAACATTTTATCTAGGTTAAGACCAAAGAAGAAAGTTTTAGGTATGAAAGTTGATTTGCACAGGGCAAGAAAAAACAGTTGATGGGATAGTTTATAAATGGAGTCTTCCCATTAGGATTCAGAATGGAAAGATAAAGCCTTACTTTGGACTAATGTTAGTGGAAAATATTTTTATGAAGGTGTTACTGACCTAGTCATACAAGTGGTTTAGCTTTTCAGAGTGAGGCTGTATATTAAAATGTTATAGCAATAGCATTGGATAAAAAATTAATGCTATAAAACAACTTCGACTTTTAGAAAATTCAGTTCTGAATATGTTTTCAGTTTTATAGTTAATACTACTGGTTTATTCTAACCAGCAGTGATTTAAAAAAAACTTTTAATATGGGCATTCACCAAGTGAAATATATATTGATAGTAACAACAAAATTATCTTAAAAGGCATCTTTCTGCCTGCCAGTGTTACTGTACAGTTTGTCTTAGCCTTGGCTTTTGTTCTCCTAAAAGGAGGGTCCAAGACAAAAGCTTGTGTCCAGTAGTTTATTGGGGATGTGATTCCAGGGAACAGGAATGAAGGGGAAATGAAACAGATGGAAGGAAAGCCAATCAAGGATTCATTGACTTGGAAACAACATAGCTCTAGGGCTTGATCTTGAGGGATCTGTGGAACCTTATGAAATGTGCCTCTGAATTGTCTTTGAAGGGGGATTAGCAAGTTGTGTATACCCAAATGCCAAGCAGTCCTATAGCTTGTCAGAGGCATGAAGGCAAGGTGAGGTCGTCCAGTCCTGCTTGAGACTGGTTATGATAGTAGTGGCTGCAGTAAGAGGCCAAGATTTGAAGTGACACATGAGAGGTCTACCACACTGCTCTGACAAATGACCAGCGTGTGTTAATGCCACCAGAAGGGATTAAATTGGTATTTACTATGATGATGCTAACGATTATTTTCTAATTTACTGGGTAAGTTATGGTTTTGTAAATTTAAAACTTAAAACATGTGAATTTGTTTGGAAAAAAAAATAGAATACCACGTTCCTTATTTTTACCAACTTAGGGACACATGAAGCTCTTTACTGTTTTTCCCAGAATTTTAAGGGGCAGATGGGAAAAGGAGATAAACATACTCCAAAGGAACATTAATTAAATAGGAAAAAAATGCTAGGCTTTTAGTCTAATCCAGTTTCACCTCCTTAGACAATTCACTGAACCACTCTGTTGTATACAATAAAGGGTGATCTCCAAAGTCTCTTCCAGCTGTACAGGTTTATGATTATTGGACAGTAATACCACTTCAGATGGAGAACTGAGCCCAGAGAAGCCTGCTATTTACACATGATTAGTGTCACATGCACATAAAAGCAGAAGCAGGATTGGATCTTGAATCTTAGAAGCTAATGGCTACTTCTAGACTTGTCACGAAGGAGACTTCCTCGGTATTGTCCATGTTTTAAAGTACCAAGTAGCTGTACCACTTGGTAGGAAACCAGGAGAAATATAAACTAATAAAAAGTGACTAGAGATTGACTTAGCAAGGCTTCAGGAAAGGGAGCTAAACCAGTGTTTATCTAACTGCATTTTGAGCTACTTGCATCAAAATCACCTGAGCCCCGTATTAAAATGCAGATTTCCGATCCTGTCCCCTAGCCATGATTATCAATCTCTGGAAGGGACTCAAAATCGGCATTTTAAACAACCCCACCAAGTGATTCTCAAGACATCCCTACAGTTTGAGAACCAATGGTATAGTAAGTAAGTGGAAAATATACAGAAAACAGATGAGGAAAGAAAAAGGCCAGATAAAGAACAAAAAGGAAACTTTAAAAATGGTAGGATGACTGAGGAAGATGCAGGATATATTAGGGCATTGTATAAATTACTATATATAAACATAAAATTTAAGCCTACAACCTGCTTGAAAAATAGCTTATTAACCTAATTCAAGAAAGCTAGAATATTTGAACGAAACCTCAAACTTCGCATCATTATTTGAAAATATGTAGGATTTACCTTCTCAGAGCAATTGTATGAGCAACATACAAATACCAGGTGATAGCATCAGCACCAATTATAAATCTATTTTTAGCCTCTCTAGGTTGATTGGTTTTGTGTTTCCTTAGTTTTTTAACTTTCTCAACTAGTTCTACTTTGTGTATACCCGTCAGTCACT EMBV3_25175 CAAAAGCCTCCTGCGAGAGCCCTGCCAAAACAAGGCATCCTGTTAAAAGTGGCTGAAACC Variant GeneID:535351|VEZT:XM_002687207:68_cdna 188^260 1 EMBV3_04544 GeneID:535351 5 GENE VEZT NULL vezatin, adherens junctions transmembrane protein EMBV3_14431 GTGGGCCTTCAAACTCTACGACTTGGACAACGACGGCTACATCACCAGGAATGAGATGCT Gene GeneID:526544|NCS1:NM_001040547:136_cdna Constitutive 0 NULL GeneID:526544 11 GENE NCS1 FREQ NCS-1 neuronal calcium sensor 1 EMBV3_04406 CAAGAAGAAGCCCCTGAAGCAGCCCAAGAAGCAAGCCAAGGAGATGGACGAGGAAGATAA Gene GeneID:615148|CCDC72:XM_002687179:56_cdna Constitutive 0 NULL GeneID:615148 5 GENE CCDC72 NULL coiled-coil domain containing 72 EMBV3_43080 ACTTTGGAAGTTCAAGACACATCTGGGCACACAAGCCATGAGCAAGGAAGGGAGCACGGA Gene BVV0102_258552 + 0 NULL GK000004.2:105564690-105639483 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182659 TCONS_00182653 TCONS_00182658 TCONS_00182651 TCONS_00182657 TCONS_00182660 TCONS_00182652 TCONS_00182654 1 XLOC_110919 Coding TCONS_00182652 XLOC_110919 Coding Coding LOC523235 4:105196729-105574650 j TSS136448 6509 1 TCONS_00182652_8 234 0.0694423106467967 5 0.9827900084674 0.000480188000032341 0.000327797884291294 6.99942493427412e-10 0.000278333076003529 6.97896162042694e-05 7.97497366677075e-05 2.19069963949707e-31 9.48842216971141e-06 0.000656995293671627 4.22663740141313e-05 6.56268883396643e-07 1.17371328889081e-05 0.000160239127864694 5.12105007494099e-05 0.000102411399252938 0.000885113781422404 0.00173436139879403 0.000161388974162894 3.36870539622423e-10 0.000337046901682685 0.000345470061781683 0.000244020558430094 4.44232110103124e-06 0.000812842411496642 0.000278062981961998 0.000362580349795827 3.53953592537589e-12 0 0 2.43658256793128e-05 XM_005198122.1 TMEM178B PREDICTED: Bos taurus transmembrane protein 178B (TMEM178B), 0.0 3865 100.00 0.329082808419112 NM_001195278.1 TMEM178B Homo sapiens transmembrane protein 178B (TMEM178B), mRNA. 0.0 2594 73.79 0.639422338300814 0 coding 1 1 0 0 -0.100422661065326 0.468811461237472 -0.00103865860941588 0.989855133562218 GTTCGATCCCTGGGTTATGAAGATCCCCCGGAGGAGGGCATGAAAACGTTTCACCTGTGGCTTGTTCGTGGGCCGGCCTCCACCCCAGTTATTCAAGGGCTTCTCACCTGGGGCTGACTCCAGACCTGAGGATGCCACCAGCACCGGCTGGACGCTGTTTGGAAGTCTGCCTTTTCTCTTAGAATCGGGGCCCGGAGGAGAAATTGAGCGGTGCACGTACATCAAATACCACTACTCCTCAGCCACCATCCCCAGGAACCTCACCTTCAACATCACGAAGACCATCCGCCAGGATGAGTGGCACGCTCTGCACCTGCGCAGGATGACAGCAGGCTTCATGGGCATGGCGGTGGCCATCATCCTCTTCGGCTGGATCATCGGCGTGCTGGGCTGCTGCTGGGACCGAGGCCTTATGCAGTATGTGGCCGGGCTGCTCTTCCTCATGGGAGGAACTTTCTGCATCATCTCACTGTGCACCTGTGTGGCCGGGATCAACTTTGAGCTGTCACGTTACCCCCGCTACCTGTACGGACTCCCTGATGACATCAGCCATGGCTACGGATGGTCCATGTTCTGTGCATGGGGGGGCCTGGGCCTCACTCTGATCTCGGGATTCTTCTGTACCTTGGCCCCTTCTGTCCAACCTGTCCCGAGGACCAACTGCCCCAAATCCAGACCCGAGAACGGGACAGTGTGCTAAAACAACAAGCCCATACTCACACACACACACACACACATATATATATATAAATATATATATAATATACATATATATGACAAAACTCAATCAAGACAATGCCAGTGCCAAGGCAGAGTGGGGGTCGGCCCAGGCACCCACATCTCGCCGGACTGTGTGTCGCCTCATCACCGAGATGGGGGAAGGTGTTCCCCTCACGTGGCTCTTCCATCGATTCGTAACTTCTGACTCCGTGGTTTCTTGAGGACAACGTGAGCATCACCCCTCAAAGACAGGGTCCTGATTCCCACCACTCACAAGGATGGGGGCATGGAGGGGGGAGGCTGGGAGGAGGGGGGAGGCTGGGAAGAGACGGTGCCTGTGGTCCAGGGTGGCACAGGTATAGACAAGAAAATGCCCTCCCCTGAGCCGACAGGAGGGGACACCACCCCAACCCCGGTCATATCGCAGAGAAACAACGCCCTTAGTTCATAGAATGTAACCAGATCTTCGAGGCCATTTCCAGAACCATTTTCTTCTCTTGCTCTTCCTGTTCTGATTTCCTTCCTGGCCGACCAGCGACACACCAGAAAGTGGAAGAGAAAACACACTGAGAAGGAAGTTTTCTCTCTGCTGCCAAACTTTTGGATGAAGTTCCGGAGGTGGGAAGGGGGAGAGAACGCCGTGCTGAGAGGCAAGACCCACATCAATGAAAGGACACTTCCGTGGATGCTCAGAAAGCCCAGTCTTACCTTCCAGCTGCCTTACACCCAGTTAAACAAGAGGCTGCCCTGCCCTGAACCCAACCTGCACTCCCTGGGCAGATCGGAGCCTTGGAATAACCCTCTGGTGTGTGTGTGTGTGTGTGCGCACGCGCGTGCGTGTATGTGTGCAACAACTTTGGATGGTTTCCTTTTTTTCCTTTTCACCTTTTTAAAATACTGCTGGATCATGACTGTTGTCTATCATTTTTGGTGGTTTCATGGCCCAGGATGGAGGCCCCAGGAACTAGGAAGCACCATGAGGGTGGGCCTCTGTGGGTGCCAGTTCTGCAGCTTGACATCCCTGCTGTGTGTGTGTGTGCGTCTGTGTTTTCTGAGTGTGGGATTTCTATCATTTGTGTTGCATTTTTCTATTATTTTTAGTGCAGCTGAAATTCCCCGAGGGCAGAACCAAGAACAAGAGCACTGGGCAGAGGACCTGTGTTGCTGCACGTCCCAGGGCTGGGGTGCCACGGGACTTGGCCCCCTAACTTTGGAAGTTCAAGACACATCTGGGCACACAAGCCATGAGCAAGGAAGGGAGCACGGATCAAGAGGGAGAAGGGGAGTGGCCTCAGTTACCGCTGGATAAAGTCTGTACACCAAACGAGACCTTTCCCTTTCCGTCACGGAAGCTGTCCTTTGTCACTGGACATCCAGCCCTTTGCTAGGGGCGACCTCTGTACAGACGAGAGAAAATGGGTCCCATGCAGAGAGAGCCGCCATGTCCCATGGGCTCCAATTTGTATGATATTGTGTAAATTCACAGAGAACTCTTGACTCTTGCCATCTTCGTCCTTTCCCTCTTGATATTCAAGGCCATGAATCCCAAAATCGCCGTCGTGGTGGCTAGCATCCAAGCAGAGGTGGCCTCGATCCAGCCCAGTGTCCCAGGCTCGGGCAGGCAAGCCCCCACTGAATGGGATTCTTCCACGTAGTCTCTGAGCTTCACTGCAGAAAGGATAACCTAGAATTGGAGGACCGCTGCTGAACAGGACGCACTGTCCAACTTAAGCATGTGGATTTTATTCAGTCATCCAGCTTCCTCAGAGAAGTCGGCTCCTTAATTTACCCACTCTCAGGCTTCCTTCCTTTTATCCAAAGTCGATTTTGCCAAGAGCACTCTTAATCCCTCTTTGTTATTCCCAGAGGCGATGAAATAAGTAAACCATATGTAGAAAATAGCATATATGAGCTAAAACAGTTAACTGTTAACCAAGACATGTATTCAATGCCTTATTTTTTTTTTTTTTTTACCATTCTCCTAGTGTTAATAATTCTCGCTGTTCTTGCCCAAGGGATTGGGAACACATCAGATTTCTGAAACATTCTAATGGTCTTTTAAGTTGAAGATGGGAATGAGTGTTAAGCCACTGGGATCTTCTTTCTCTGGTCAGTTGGTGAAGAAGATGGCTTTGTCAGAAGCACATGGGTTCTGATAGGTTCTTATGATGCATTCACTGGGAGTTGTTCTGGGCGCGATCCTGTTGGGGGAAAACTCAATCCTAGGTTCTAAACAAGGAAAGATTGCGTTTCCCAAAGGGTCAGCATGCTTTCTGCTTTGCAGGGGATCAGCTTACAGTGTTACGATGAGACCTGCTCTAAGGGAAAGCTGAGTCATTCATTGCTCCCAATATGGTTGGAGCCCAGCCAGGGATGGAGGAACCACCCAACCGCAGGGGGTGTGTGTTCACCACTGAGAAACAGAAAACTGGGTATCAGCACGGGGGTCCCACAGCTGTAACTCAAACCTGGCCTCACTCTGCTAGACACCAACCTCAGCAATTGCAACCCCTGTTCTTCACTTGCAAGGACTGGGTGTTTGGGGACCTCTGTGCACCTCTGTCCTCTCCTGGCTATGCGTTTCCCTTCCTCTCTGGGTCACCTTAGACCTTTTCTGGCCTGAGTGTATCTGTGTGTCTGTGTCGCTGTGACTATAAATCTGCCTTTCACATACAGAGCTTTCATAACTCCTCCTCCTCTTTCCCCATCTCCACCCATGGTGTGACTGTTTTGCTATTCAAGACTATCTGTAAAAATGTACAAATAAAAATGGAAACTGAAAATAGTGGGGAGGGAATTGAGACTAGACAAATGCATTGCTGTAGCCCTCAGTTTTCTGAGGACTTATGTGGACTGCCCGGAAACCCCGAGTCGGTGGGATTCCGAGGCAGGGAAGCCATTGGCCCAGGAGGTTGTTTTTTGTTTTTGTTTTTTTTCTGGTTGTTTCTCTGACAGTCACGAGTGTCTGCTTGGAACTCTCTGTTTGAAAGGTTTTGGCCTTTCAAGTGAAACGTTTTTTCTGAAAAGTAAAAGTAAATCATCCAAGTGTGAAGGTGAAGGTTATTGCGAAGGTCAACACAGAGGCCCGATCCGGGGGTGGTATTAATCGTTTTGTCACTGGCTCGCTCGGGGCCCTGGGCGAATCTTGTTACCTCACCGCTGTCTCTGCGTCCTCTCAGCCAAACAGGGGGGCTTCCAGTGCACCTGGGGTGCTCAGTCACCTTGGCCATCCTGCTGCTATTTTGGGAAAGGCTTCGAACCCTTGCTGGAGCGCACTTACCATGGGAGGTACATTCTAGAGCCCCTCCTTGCTGCTCTCGCCCCACGCTTTCACTCCTCGGAAAGTAACCTCAAGCTAACAGCCAGTTTGTGCTGAGTCCAAAGCCTTTTATCTACCTTTTCATTCTCAGACGCCTTTCCACCCACTCTGACGATCTCATTTTACTATCGTTACTGACAGAGCGCTGTCAGTAGGAGGAAGAGTCTCAAAGGAGATGATGTGTGTGAATTGCTTTGTAATCTGTGACTTACTCTACCAATCTGGCGGCTCCTGTCGGAAGCAGGGGGTCTGGCTAAGGATGCGATCGAATCAGAATGATGAAAGCCTTGGTGGGAGGGGAGGGGAGAGGTGGTGGGCAGCAGGGGATGGGGGGGCGGTGGAGGTAAGATAAAGAAAACTTTTGGAGGAGGAAATGGCAGAATCACAGGGCATCCTCAGCATGGCAGCAGAGAAGGATCCCCCAAAGGCTGGGCACCCCGAAGAGGAAGTAGGAAAGAGGAACATGGGCAGGTAATCCTATAATACAAAGAGCTGCCTTCCCCTAGGATTGAGAAGACTAGCTGCTTCAGGGGCAGGATTCACACCAAACAGCCAGTGACCTAACCCTTCCTCCTCCATGATACTATCAATCCAAACTTTCTGCTCTCTGATGGTCCACAGTGATCATTTCTGGGGGCAGTGCTGTCCAGCAGATACGATACAATGCAAGCACCATATGCCATCTTAAATATCCTAGTGGCCCCATTTTTAAAAGTCCAAAGAAACAGGTGAGATTAATTTTAATACCTGTTTTAACCCAACATATCAAAAAAAAAAGTATCATTTCAACATGGAATCAAAAAGTATCATTTCAACATGGACTCGGTATAAAAATTACTGAGCTATTTGATGTTCTTTATTTTTTTTTCCAAATGAAGTCTTCAAAATTTGATGTGAATTTTGCTCTTAGAAAACACATCAGTTTGAAGCAGCTACATTTCCAGAGCTCAGTAATCCCACAAGGCCACCAGCTACCATATATAAGACAGCAAATATTTAGACTCTTGGTTAGGAGTTGGAATCCCCACTCACCTATGAGTCACTCAGACCTCATGGCTAATAGGCTGGAGATCCGTGTTGGCCCTGAGTAGAAAGTGCAGGAGTGATGTCCAGGCTGCCATCCTAGCCCAGGAGAGGACCACTGCTTGTCAAACACGTCACATCTGGCCAAGAGGTTCAGCGCTGCCCTTGGACACAGCCCCAGATGGCCCATCAGAGTTCTAGAAGCCACAAAGCAAGTCACTTTTTTCAGCTATAGGAGCACTAGCTTATCCTTTATCTAGATGCCCTTTATCTGAGGGTAGAGAGAGGGCCAGACGGACCTTGTCTTTGTCAGGAACAAAGATCTCCACAACCTCTTGTCACCTGGTCCAGTCACCTGCTAATAGCATCTCACCAACATTCAGAGCTGTTTTCTCAACCCCTTACTTTCCTTAAATGCTAAAAGAGCAGTGGCCACAGGCAGACTGGGTCTCCTAGGAGGTGACAATGACAGGCTCTGTCCCTTACACTGGGACTCAGGGTCTACTATTGCCCACCTCTCTTCCCTGCCTGGAGGCCTTCCTTAGATTTGAAGAAACCTCTTTTGGGGGTGGAGACAAGAAGTGAGATCTTTAGTGCCAAGTACAGAATAAAATGCAAGCAAACAACCCCTGGGCGTTCTCAAAGCATTTAGAAGACCAAATATGACATGGTTGGGTTCATTTAAAATACCACGTTCTGAGCCCTCGGTTACTGAGCAAAAGAGAATGAGCTGATTCGGTGAGTATGTTTTATATATGGTCATTAGACAGGGACCATAGCCGACAAAACTCTCGAAACACCTGGAGTGTTTATGGTCCACCAGATTATTGCTCAGTCAATAGACATTGATTTACCTTTAATTTGCATAGTGCTTTCTGATTGGTTAGACAAGGTGTGACGTGTTCTGCAGGATTCCAACATCACCTCTGCCCTCGGAGGTAGCAATTCCTGTGGTTATTGGTGCTAAAAATAAGATTAAATATTATGTTAATTTGTTCTGATACGATGTGAATACGTGTTGTTTAATCTTAACAAGAATGCTACATCTTATCAGATCTATTGTACTGTCTGTTCCTTCTCATAGTTAATTAATTACAGGAAAGGTGATCCAAACCAGATCTCAAAACTATTGTGCTATTCTGAGAGGTGAATTTAACAGGGATGTGGGAGGGGTGGGATGAAAAGGGAAATTGCCAGGTTCCTGTGACTTTGCAAGAACTGAGGAAGCAGAGAGCATTTGGGGACTTCTGACACTGACTGCATCTTGCAATTTTCTTTTTCGAATTTGGCAGAAATACTGTATTTCCATCGATCGAAGAAAAAAAAAAGTGTCTGGTAATTAATTAAATGACTTGTTCATGGAAAAAATAAAAATAAATAACCTGTCAGTTGTGGAATGTAAACTGATTAAACAATTAAATAAAGAAGATCATGTTGTGTGTTTTAA EMBV3_37221 GGGCATCCATATTCCTTGGACCTGTGTATGGCTTTTTCAATTCTTTCATGGATGTGCTGC Gene BVT0102_229416 - 1 EMBV3_35152 GK000003.2:54190131-54201290 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05919 AATCATCACCTCAGCCAAGACGCTGGAGCTGGCCAAGGTCACGCAGTTCAAGACAATGGA Gene GeneID:529443|MFAP3L:XM_002689447:16_cdna Constitutive 0 NULL GeneID:529443 8 GENE MFAP3L NULL microfibrillar-associated protein 3-like EMBV3_25091 GCTGCTTGAACATCTGTTTTTTTCCCTCTTCCAGTAACTCTGGGAGGTAATACACTGCAG Gene GeneID:539475|LOC539475:XM_002686653:80_cdna Constitutive 2 NULL GeneID:539475 4 GENE LOC539475 NULL hypothetical LOC539475 EMBV3_43381 GGACTGATTTTCACACCAGCATTGAGGAGACCAAATCTACAACTTTCCGGTTGCTCTGTC Gene BVT0102_008230 - 1 EMBV3_36737 GK000029.2:5511524-5536299 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164433 TCONS_00164426 TCONS_00164427 TCONS_00164432 1 XLOC_100218 Coding TCONS_00164427 XLOC_100218 Coding Coding LOC100139381 29:5331659-5637035 o TSS123032 787 1 TCONS_00164427_1 82 5 0.997439214081048 0 0 0 5.81704960024972e-05 1.67290587919146e-05 0.000168554399603082 0.000264626084979771 0.00091696747623561 0.00163318017800277 0.00148507707039169 0.000872395170587822 0.000475976291030703 0.00449590889395761 0.013782240372611 0.00798664923880054 0 0 0.00022002803674561 0 0 0 2.5296884856066e-05 0.000509600229533219 5.02407973092092e-05 0 0 0 0.000124425859129935 0.000197066755521806 0.000171152875937156 XM_001787480.2 LOC100139585 PREDICTED: Bos taurus putative upstream-binding factor 1-like protein 3/5-like (LOC100139585), mRNA. 7e-135 484 88.28 0.485387547649301 NM_001076683.1 UBTF Homo sapiens upstream binding transcription factor, RNA polymerase I (UBTF), transcript variant 2, mRNA. 5e-48 196 76.43 0.332909783989835 TCONS_00164427_1 sp|P25976|UBF1_MOUSE UBF1_MOUSE Nucleolar transcription factor 1; 3e-31 117 65.43 0.975609756097561 0 coding TATTTCAGATGCACTGTTTCTTCTGTTCAGAGGTGTTCTGAGTTGGCTGGACCATGGACAGCTCCGAAAGTTACAGCTGCTGACCCATCCAGAGAACACAGAACTCCTGACTGGATGGGACTGATTTTCACACCAGCATTGAGGAGACCAAATCTACAACTTTCTGAGGTGTTCTGAGTTGGCTGGACCATGGACAGCTCCGAAAGTTACAGCTGCTGACCCATCCAGAGAACACAGAACTCCTGACTGGATGGGACTGATTTTCACACCAGCATTGAGGAGACCAAATCTACAACTTTCTGGTTGCTCTGTCAGAGGTGGTCAGAAGACTCTTCTTGTGTGAGTGCAGGAGACACGTGCAGAGAAGGGCTTCCCCTGCCAGTGCCTGAAGTACCTGCGCCTCCTCCACAGAAACAGAGGATCGCACACACTGCAGGACTTCAGAAATAACTCACCTGCTGAATCTTGAGAGTGAAGAAACAAAAATTCTGCTGAGGTGTCTGAACTGCTGGGATCACATAAGTGTCCCAAAGACCTAGAAATGGCGATGCCTAAACGCCAAGATGACTGGTCCAAGGAAGACATTGTACAGTTACTGGAAAGTATGGGGAAAAGCATTCCATCCAGTGACGGGCACACGTTCAAAACAACCCAGTCAGTGATGGACTGGGAAAAAGTAGCTTTTAAAGATTTTTCTGGGGAAATGTGCAAACTCAAATGGTTAGAGGTTTCCCATAAGGTGAGAAAGTTCCACACGCTGAAAGAATTAGTCCTGGAAGCTAAGGAN TCONS_00162934 r 5' 25115 TCONS_00164434 s 5' 130 EMBV3_33267 CTGCTCCATTCCTCAGTCTGAACAGTTCAGCTACAGTCAGACTCTGGACAGGGGGTTACT Gene GeneID:507345|VCP:NM_001034294:26_cdna Constitutive 1 NULL GeneID:507345 8 GENE VCP MGC128142 p97 valosin-containing protein EMBV3_39606 TTCTCAGTGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGG Gene BVV0102_120570 + 0 NULL GK000009.2:96894590-96977713 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149038 TCONS_00063808 TCONS_00201120 TCONS_00063810 TCONS_00162571 TCONS_00200854 TCONS_00142473 TCONS_00218950 TCONS_00231771 TCONS_00217533 TCONS_00189709 TCONS_00131534 TCONS_00123275 TCONS_00063805 TCONS_00186556 TCONS_00230831 TCONS_00117596 TCONS_00240372 TCONS_00210949 TCONS_00255144 TCONS_00186493 TCONS_00063807 TCONS_00131539 TCONS_00158397 TCONS_00098199 TCONS_00186558 TCONS_00240374 TCONS_00050935 TCONS_00147823 TCONS_00149043 TCONS_00116087 TCONS_00131535 TCONS_00149042 TCONS_00054140 TCONS_00111145 TCONS_00232767 TCONS_00222116 TCONS_00106013 TCONS_00063813 TCONS_00231768 TCONS_00186557 TCONS_00233458 TCONS_00217532 TCONS_00054136 TCONS_00238282 TCONS_00186834 TCONS_00230833 TCONS_00012043 TCONS_00011614 TCONS_00229646 TCONS_00131537 TCONS_00131531 TCONS_00230828 TCONS_00178734 53 XLOC_090915 XLOC_038534 XLOC_122768 XLOC_038536 XLOC_099452 XLOC_122505 XLOC_086898 XLOC_132269 XLOC_141259 XLOC_131531 XLOC_115747 XLOC_080239 XLOC_074829 XLOC_038531 XLOC_112608 XLOC_140321 XLOC_071762 XLOC_147036 XLOC_129459 XLOC_158076 XLOC_112545 XLOC_038533 XLOC_080244 XLOC_096851 XLOC_058445 XLOC_112610 XLOC_147038 XLOC_031050 XLOC_089710 XLOC_090920 XLOC_070256 XLOC_080240 XLOC_090919 XLOC_031949 XLOC_067045 XLOC_142251 XLOC_135425 XLOC_062697 XLOC_038539 XLOC_141256 XLOC_112609 XLOC_142940 XLOC_031945 XLOC_144949 XLOC_112885 XLOC_140323 XLOC_007593 XLOC_007165 XLOC_139141 XLOC_080242 XLOC_080236 XLOC_140318 XLOC_108507 Coding TCONS_00178734 XLOC_108507 NonCoding NonCoding - 3:82882866-82884029 - TSS133493 1163 2 TCONS_00178734_3 82 1 0 0.000141490319717252 5.77653168868369e-05 6.99300610357461e-05 0.000312143495762945 0.000128734496125711 0.000291489280011418 2.7995042410328e-05 0.0016611053295165 0.000227303859023348 4.98581014065335e-05 2.95502502384652e-05 2.40838523915063e-06 4.87359967047362e-05 0.0001226150889731 8.83362555871258e-05 0.000105438779226096 0.000113274135956862 7.84121840639496e-05 0 8.49454833305992e-05 1.94324324181164e-05 3.39945770916706e-05 2.41656004354994e-05 0.000240203401177778 2.20093493412648e-05 6.9444014270721e-05 8.75712899880235e-05 3.30358699943736e-05 3.38624584097124e-05 6.74468659125314e-05 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 8e-35 152 73.51 0.22871883061049 0 noncoding 1 1 1 1 0.010181611114174 0.925451875196262 -0.140090878761763 0.0809621287771011 ACCAAACCCAGTGGAGTCCCGAGAGGCCCCTCCCACCTCCAGTTTCCCTGACTTCTCAGAGCCACCATGAGAAGCCCCCTGAGGTCACCTGCACAAGTCGAGGGAACCCAGGGTTTCCTGCCTCAACCCGGGAAAGACCTCGAGAGACCTTCTTCAACACGTCTCGAGGCCAGATTCCCCTACCATGGCTCGGGAGCAGTGACGCGCTCCCCCTCGCCACTCGCGTGGAGACCCGACTTCCCTGGCGCCCCACGAGAGGCTCACTGACCTCGCCGTCGTACCTCGTGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACCCCGAGATTCCCCCGTCATCGAGAGATGAGGGCCTTCGTCTCCTGCATGGCCTAGCGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTGAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGATTCGAGAGCAGAGCGGGGTTCTTTGCTTCCACTCGAGATGAATGCCTGTCTCCCCGGGTGCGTCTGGAATGCAGCCCCGAGATCCCTGTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTCGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTGCCTGGGCCAACACAAGACGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCCGTAACTCGAGAAAAACCACGTGGCTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGCGTCTCGGGACAAGTCCCACGTTAGGAATTGGAGGTCGAAAGGGCACTTGGCACCCTTGATGCTGACCCACAAAGTTCCCCGAAATCCCGATCTCCCTCGAGACGTAAACTGAGGTTTTCCGGCACCCCCTCCTCTGAGCCCTTTCTCCCCTCCTGATCTGGACAGGAGGGTCGACTCCCCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGAAGACATTCCAGACGTGGCCTCGTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCAGCCTGTGAATGCAGTCAA TCONS_00173872 . 5' 300674 TCONS_00173872 . 5' 300674 EMBV3_09983 CCGTTTCAGGGTTTCCTAGTCTTGAACTACTGGCTACGCGGCTACCAAATGCCTAAGGGA Gene GeneID:540642|FBXW11:XM_002696250:10_cdna Constitutive 0 NULL GeneID:540642 20 GENE FBXW11 NULL F-box and WD repeat domain containing 11 EMBV3_00966 AGATAAGAAGTATAGAAAGGAAGCCAAAATCTAAAGAAAGCAGGAACCCACAGAGGTAGG Gene BVV0102_315928 + 0 NULL GK000018.2:45831073-45852254 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03980 CGGAGGGACTCCCATCCCTGTGGCCGAGCCCTCAAGAGATGGCTGCCCAGTGCGTCACAA Variant GeneID:615304|CPNE3:NM_001099142:82_cdna 89^173 1 EMBV3_09811 GeneID:615304 14 GENE CPNE3 MGC157075 copine III EMBV3_18356 AGGCCGTGTGTTTAGAAGCCTAATTGTCACATCAAGCATCATTGTCCCCATGCAACAACC Gene GeneID:613877|MEIS1:NM_001083507:71_cdna UTR3_Alt 2 NULL GeneID:613877 11 GENE MEIS1 MGC138090 Meis homeobox 1 EMBV3_37701 CGACTTCCTGAAGCTGAGGACGATGCTCATGAAAGTAGAAAATGAGGACATGAATAAAGA Variant GeneID:511612|SEPT2:NM_001046092:23_cdna 848^931 1 EMBV3_13803 GeneID:511612 3 GENE SEPT2 MGC133898 septin 2 EMBV3_02302 CTTCTGATTGCTTGCCTGTCTCCAGTATTCTGTTGTGTCCTCTGAACCAGTTTTTCCCTG Gene GeneID:783000|PLEKHB2:NM_001083529:63_cdna Constitutive 0 NULL GeneID:783000 2 GENE PLEKHB2 MGC142723 pleckstrin homology domain containing, family B (evectins) member 2 EMBV3_28430 TTATAGGACGGCACATACCCATCGCAAGCATTTCCCCAGATTTTTGGCCCTGATCTTGGG Gene BVV0102_201556 - 1 EMBV3_38864 GK000010.2:2193666-2361695 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21371 CGCCAGAGTGCCATTTCAGGTGTAGATGTTGATAACTATGTCGTGGTGCGGAATTTGGGC Gene BVT0102_080483 + 0 NULL GK000010.2:1761416-2067850 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015649 TCONS_00015648 TCONS_00015647 1 XLOC_008530 NonCoding TCONS_00015648 XLOC_008530 NonCoding NonCoding LOC100848296 10:1762675-1764341 j TSS11007 386 4 0.770570570570571 3.17675454507762e-05 0.0015463043593691 2.1655055158976e-05 1.76336923782137e-05 0.000878690988004725 1.04883349201539e-10 1.19631123785212e-05 7.7071128112813e-06 0.00246277206508181 9.10026944264363e-06 0.00809740686695982 0.00144251809900615 6.06986911972228e-06 0.00177834722478771 0.000882622245882261 0.0752293382762654 0.0179359425979884 0.0376822826531728 1.49247664350537e-05 3.77360990656392e-05 6.56887928231166e-06 0.0404497042380319 0.035325894694404 0.0324172391323049 1.51212119962453e-05 1.04749360601516e-10 1.68683374151537e-05 0.00773590899699767 0.0021362817526119 1.25352839919447e-05 XR_138783.2 LOC100848296 PREDICTED: Bos taurus uncharacterized LOC100848296 (LOC100848296), 4e-166 587 100.00 0.839378238341969 NR_015370.2 EPB41L4A-AS1 Homo sapiens EPB41L4A antisense RNA 1 (EPB41L4A-AS1), non-coding 2e-24 116 76.97 0.414507772020725 0 noncoding 1 1 1 1 -0.127809100913351 0.312193651683017 0.0619277633292039 0.602001784299552 GGAAGACGGCGCGTCCTTTCTGGCCTCGGCTCTCGGTGGGGGATGTTTGTTTGCTAGAGAGGTCAACGCCAGAGTGCCATTTCAGGTGTAGATGTTGATAACTATGTCGTGGTGCGGAATTTGGCGGAAATGAGTATCACCATCCGTGCAGGTGAAAGATGGACGCTGGAAGCATAGACTGCTGCCAACTGAATACTTAACTCTCTGGAAGCGTGAAGATGACCTAAGGCTGTCCTTGGTGAGGAATTTGACAACTTGATCTTCAGGAGCTGCTTCGAGTATTTAAAATTTCCAGGATTGCTTAAAAAAAGAAGTGCTTTTGGACAGCCCATAAATGTACATATACAACAGTGGGACTGTAAATAAAATAATGTGCTTCTTGGAGG EMBV3_19988 CCTTATTTGTTACCAGTTATACTTTTTTCCTGAGTGGGAAACAAGCCATAGCTTTCTGGC Gene BVT0101_011850 + 0 NULL GK000002.2:24777205-24806837 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104746 TCONS_00104748 TCONS_00104747 TCONS_00104745 1 XLOC_062450 Coding TCONS_00104746 XLOC_062450 Coding Coding DYNC1I2 2:24804756-24860911 j TSS77493 4675 1 TCONS_00104746_6 610 0.0119786096256684 17 0.917049542330021 0.00105370379914633 0.00041299874613176 0.00070591740499443 0.000473094972405811 0.000162663272466376 0.000630664526290436 0.000842190649872496 0.000597660599566484 0.00143532047097147 1.85471375094819e-23 1.63155497717836e-08 1.1793939174787e-19 0.000108834850833614 0.000260138387918689 1.90557025017897e-11 4.58696868674844e-13 2.00255724639613e-41 0.00031426988143322 0.000638641611343636 0.00121297959732111 0.000367290482639097 2.0605875347619e-05 5.16520921938708e-08 4.00264834857398e-09 0.00088371339951177 6.6246209997677e-05 0.000699555660074355 6.28514354137326e-37 6.4947230837979e-05 1.41721729611163e-05 NM_001075883.1 DYNC1I2 Bos taurus dynein, cytoplasmic 1, intermediate chain 2 (DYNC1I2), 0.0 2542 100.00 0.301176470588235 NM_001271785.1 DYNC1I2 Homo sapiens dynein, cytoplasmic 1, intermediate chain 2 (DYNC1I2), 0.0 2985 92.83 0.425668449197861 TCONS_00104746_6 sp|Q13409|DC1I2_HUMAN DC1I2_HUMAN Cytoplasmic dynein 1 intermediate chain 2; 0.0 1135 94.67 0.998360655737705 2 coding 1 1 0 0 -0.0887419812014941 0.698442154987182 -1.24273858810166 2.58659444668114e-05 GGGCTACTCCTCCCCGCAGCTGGGGCCTTGCCTTGCTTTCTGGGAGCGCCTTGGCTGGGGCGAAGCCGTTTGTCTCTAAGCTCTCGCCGTAGCAGCCGCCGCCCATCCCTCTTTGTGTGCTGGGGGAAGCCGCGGAACTAGTGGTGGCGGCTGTTGCTGTTGCGGGCGAAGGAGAGGGACGTTACCGGGAAGTTGCTGGCAGGCGGACTCTTCCCCATCCCGCCACCGAACAGGTTGCAAACATGTCTGACAAAAGTGAATTAAAGGCAGAATTGGAACGTAAGAAGCAGCGGTTGGCTCAAATCAGAGAGGAAAAGAAGAGGAAAGAAGAAGAAAGAAAGAAAAAGGAAACTGATCAGAAGAAGGAAGCAGTTGCTCCTGTGCAAGAAGAATCAGATCTTGAAAAAAAAAGAAGAGAAGCTGAAGCATTGCTTCAAAGCATGGGTCTAACTGCAGAATCCCCCATTGTCCCTCCTCCTATGTCTCCATCCTCCAAATCTGTGAGCACACCAAGCGAAGCTGGGAGCCAGGACTCTGGAGATGGCGCCGTGGGATCTAGGACGCTGCATTGGGATACAGATCCATCAGTTCTTCAGCTTCACTCAGATTCCGATTTGGGACGAGGACCTATTAAACTTGGAATGGCTAAAATTACACAAGTTGACTTTCCTCCTCGTGAAATTGTCACATACACAAAGGAAACTCAGACTCCAGTTATGGCTCAACCCAAAGAAGATGAAGAAGAAGAAGATGACGTGGTGACTCCTAAGCCACCTATTGAACCTGAGGAAGAGAAAACTTTAAAGAAAGATGAAGAAAGTGATAGTAAAGCTCCTCCTCATGAGCTGACTGAAGAAGAAAAGCAGCAAATCTTGCACTCTGAGGAATTTTTAAGTTTCTTTGACCATTCCACAAGAATTGTAGAAAGAGCTCTTTCAGAGCAGATTAACATCTTCTTTGACTACAGTGGAAGAGATTTGGAAGACAAAGAAGGAGAGATTCAAGCAGGTGCTAAACTGTCATTAAATCGACAGTTTTTTGACGAACGTTGGTCAAAGCATCGAGTCGTTAGTTGTTTGGATTGGTCATCTCAGTATCCAGAATTACTGGTGGCTTCCTATAACAACAATGAAGATGCTCCTCATGAGCCTGACGGTGTGGCCCTTGTATGGAATATGAAATACAAAAAAACTACTCCAGAGTATGTGTTTCACTGCCAGTCAGCCGTTATGTCTGCGACATTTGCAAAATTTCATCCAAATCTGGTTGTGGGTGGTACATATTCAGGCCAAATTGTGCTGTGGGATAACCGTAGCAATAAAAGAACTCCAGTGCAAAGAACTCCACTGTCAGCTGCAGCACACACACATCCTGTATATTGTGTAAATGTTGTTGGAACACAGAATGCTCACAATCTGATTAGTATCTCTACTGATGGAAAAATTTGTTCGTGGAGTCTGGACATGCTTTCCCATCCACAGGATAGCATGGAATTGGTTCATAAACAGTCAAAGGCAGTCGCTGTGACATCTATGTCCTTCCCTGTTGGAGATGTCAACAACTTCGTTGTTGGAAGTGAGGAAGGTTCTGTGTACACAGCATGTCGCCATGGCAGCAAGGCTGGAATCAGTGAGATGTTCGAGGGACATCAAGGACCAATTACTGGCATTCATTGTCATTCAGCTGTTGGAGCAGTGGACTTCTCACATCTTTTTGTCACTTCATCATTTGACTGGACAGTAAAACTTTGGACAACTAAGAATAACAAGCCTTTGTACTCATTTGAAGATAATTCAGACTATGTTTATGATGTTATGTGGTCACCCACTCACCCAGCCCTGTTTGCCTGTGTGGATGGCATGGGTAGGCTGGATTTGTGGAATCTCAATAATGATACAGAGGTGCCAACTGCAAGCATTTCTGTGGAAGGTAATCCTGCTCTTAATCGTGTAAGATGGACCCATTCTGGAAGAGAGATTGCCGTGGGTGATTCTGAAGGACAGATTGTTATATATGATGTGGGAGAGAACCGAGCGGATGCAGAGGAGGAAGCAGCTACCCGAATACCTGCTTAGCTCCTGAAGAGAGAATATGTAGCCTTAGTGGATTTGGGGAAGACTCGAAGTAGATCCTAGAACTATTTTGCATGCTTCTGTCTAAATGATAATTAAAAGGAAATTTCGTGGATTAAACTATGGATTTAATGCAGCAAGCAAGTCTTACAAAGTCCTTTTTTATATAACATGCATTTTGTTTTGAATTTGTGTCATTTTTAATACAGTTGATTGACTTTACAGAATGCAACCTTTTCTGAATTCTTATACACAGGTGTATATTTGGTATTCTTTTGACGTCTTTTCAGCTTATAACACTATATACAGTTCTTTCTAAAGCACAGATTATGGTCCACATATTTTTAAATAACCATGATTCACTGTTATACTGATAATGTGCTCACTAACCATAATATGTAGGAACATTGTTTATTCTTAGCTATAGCATGAAAACTATCCAGTTCCATTCTGATACTCTCTTTTTCTTTACAATTCTTGTGATAACTGTCTATAAATAAAAACAAATATGCTTTAACTTTTCAAATTTTCATTTTGATTTACTCCTTGCAATTAAAATGTTATTAAATTCTGTCCCTCTCATAAGGTATCCTGTCTTCATCTTGCTTTAAGCTCCTGTTGTAAGCAGCTACCTCAAGTCCTGGAAAGCTTTGTTCCTTAAATTACCATACAGTATACTGTAGATCTCCCAGTTCATTATGAGCTGATGTCTAGGTAATCTAAGTGAAAAAATTTCTTCTAGATTAATTTTTGTTTTACTCCCTTTTTCTTCCCATCTAAGATATGGTGTAAAGAATAAACGGAAAGCTGCCTGTTGTTTTTGCTAATTGAGATTATATGTGAACCCTCTGAGACTGAAACCTCCTTTGAGAGAAATTGATTTTGTGGTTGTAGTAGCTATGAAAGAAAGTGCTCAAATTAAGTTTTTGTCATTGGATCAACTCCACATCTTGAGATCTGTTACAACTTTGTCTATAAGCCTGAAAGTTAAGTGGCAAATATTCTAAGAATTTGTGTTGAAATCAACCTGTTTCAGGACTAGAGAAAAAGATTATGCTCAGATGTTGAATTTATTCACTTTAAGTTGTCTAGTTCCTTGACCTTTTGTCCTTCTAAAGTTTAACTGTCATTTATTCAGCAACATGAAGAATAGATAGCAGATTTTGAACATTTTTGTTTGGATTTTCTTAATCTAACAAAGGTCTGTTTGGAAATACATTTCCAAGTAATTTATTCCTAACTATGAGTATTGTATACTGTGAGGAATAATTGACCTGGAATATCAACCCCAAATTCTAGCTCTGGCACTCATGAGAAGTATGGTTTTTGCCAACTAAGTCTTTATATCTGACTTTTTATCTAGGAGTTAAGATTAGATGATTTCTAAATTTCCTTCCAGCTCTAAAATTATTGATTCTAATTACTTCAGGCAATTCTCTATTTTTATATATTCAGTTTTCATAGGTTTACACCCCATAATTGCCTGTTATATATCAGCAGCAAATAAGTTACCTCATGGTAGTAATGTCTGTGAGCCAAAAATTCAATCTTAGTGGGGTCACACTGTCTTAGTATAGAACTCATGTAATCACCTAGTTACTGTATTCTTGCCCTCCATTTGTATAAATGAGTACAAAAAAAGAAGACACAATTATGATTAAGGTTGGAAATCACAAGATGAGGCAAACCCAGATGCTCACTGGACTCAAGTTGATGCATCCAACTGTGAAAGAATAAAATTGGTAAGTGTTAGTAAAAAATACTTCTCACCAAAGAGTTCTTGCTTTTGGGAAATAACTTTCTTTCTCCCCCCAAAATACAGTGTAGGCCTTTATCTTTACCCATTTAACTTTAGCCTACATTTTTAGTAACACACGAATTTAATGGGAGGAATTGCCTTTTAAAGTTAACTGTGAAAATAAATAAATAAAATAAATAAATAACTGTATAAAAGCAAAATACAAAGTACTGAGGGTGTAAATATTGATATGAAATCTTCTGACAGATTAAGCTGCTTAGAAAAGTGTCTCAACTCTTCTGTTTTAGAAATGGAAACCTTACAAGTTTAAAAAATATCCACTTACAGAAATTGTACCTTATTTGTTACCAGTTATACTTTTTTCCTGAGTGGGAAACAAGCCATAGCTTTCTGGCTAATTTCTTATTTTGTGTTTGTTGTTTGGCTATTTTCTTTTCTAATGAGAAGTTGGTTACCTTTGAATAGAGGAAGAATACTCAGTTTTGCAGAAGACAGCTTATAAACCTCAGAAATAATCGTGTGGTTTTTTTCGTATTAATAACCAAAAAAAAAAAAATCTTCCAGTTGATAGATCTAGTTCCCTACAAAGTTTAGAAAATATCTAGATATAAAACATTGTTTCCATAATGCTGAGATATTGCATATTGAAAGAATGGATGACCTAAAATTTAGGAGTAAGAAGTAAAGCTAAGTAGTTTTAGGAATGATCCTAGTCTTTCAATATTGTAAGAATGTTGATTCATTCTGTTTTGTACTAGTAGTAATAAATTGTAACCTCTACCACTTGAACCACGTGGAAAAGGTGTTTGAATGAGTGAATAAAAATTTGGAGTGAAGAATATAA EMBV3_31135 ATGAAACATTTTACTAAGTGCTCAGTCTCTGCCTCCTGCATGGGTGGGGATGTGAGACCC Gene GeneID:614661|CORO6:NM_001102282:157_cdna Constitutive 0 NULL GeneID:614661 19 GENE CORO6 NULL coronin 6 EMBV3_00467 TTGTTCCAGATCGTCAGCTTCCTGCCGGCTGGGGTGATGTTGGTGGTGGGCAGCCGGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05956 GGCCACTCCCAGGTAAAATCCAGGGGAAAAAGTCATCTAAGTTTACCATGCAGTTGTTTA Gene GeneID:536359|AP3S1:NM_001046416:26_cdna Constitutive 0 NULL GeneID:536359 7 GENE AP3S1 MGC134559 adaptor-related protein complex 3, sigma 1 subunit EMBV3_41581 GATAGCTGCTGTCACAACCCCCTTTTAAGGCAATTTTAATGTTTCATAATTATATCTCAG Gene GeneID:509965|CMPK1:NM_001046044:116_cdna Constitutive 2 NULL GeneID:509965 3 GENE CMPK1 CMPK MGC137127 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic EMBV3_24432 GACTGAGTTCTGTGTAAGGACGAATTGAGCAGGACCACTGCCCTCCATGTGCAAACAATC Gene BVT0102_344554 + 0 NULL GK000004.2:14001415-14276356 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183252 TCONS_00183251 TCONS_00183254 TCONS_00183253 1 XLOC_111114 NonCoding TCONS_00183254 XLOC_111114 NonCoding NonCoding LOC100848662 4:14239071-14277506 j TSS136800 1253 3 TCONS_00183254_3 58 0.349561053471668 3 0.967476713326742 0.000247246303850427 8.91380353234547e-10 3.96627747429049e-11 5.9646673094529e-05 0.000517695099769934 0 9.77381749843218e-05 0 1.28038967509884e-10 0 0 0 1.62682851839559e-54 1.04311381334953e-05 1.39491675826842e-54 0 0 0 0.00030904207838927 5.92179314937965e-12 3.98167147078681e-27 0 9.4485777831578e-10 5.8465227735554e-11 0 1.87617283037634e-10 0.000506600570825226 0 0 0 XR_230821.1 LOC100848662 PREDICTED: Bos taurus uncharacterized LOC100848662 (LOC100848662), 0.0 2143 100.00 0.94732641660016 XR_242229.1 DLX6-AS1 PREDICTED: Homo sapiens DLX6 antisense RNA 1 (DLX6-AS1), transcript 2e-169 600 72.18 0.890662410215483 0 noncoding 0 0 0 0 -0.0204012449957439 0.889423290256217 0.00410779756115079 0.929562467476584 CTGTGTCGTCCCCTCGCGTCTGGGCGGCCGCGCTGCTGTTGTGGTAGGACTGGAGGTCCAGAGAATGAGCCTCACAGATGCTGCCAGAAAAGCTTGGGAAAGGTCGTGCAGCTTGTTTTCTTGCACTCTGGCAAGCTGCTGAGACAGAAAACCTACTCCTTCGGAGGAGCGTGGCCTTTTCTTATATTGCTTTCCCCCGCTGCTTCTGAGCTTCTTGAACTCAGCTCATCCATCAAGAAGCAGCTCATCCATCAAGAAGGCCTTATGGATGAGCTACCTATCCCCACTGAGAGAGGAGGAACATCAACTGCAGTTTCTAACTAGATTGCCTTCTTCATTTCAAGTGATGGCTGCCATCAGGGTCAGATTAAGGACAGACCAGCCGGATGGCTGCTTGGAAGACTAACCTACAAGGATACTAAAATGTTCACCGTGTGCTTACATCACCAGGAAAATATACCAGCACTTCTTTTAGGGAGCACTCTGGGGCTGGAAGAAATGACTTGTTAAGTTCCTCAGGAGTAATCAGAATAGAGGAACAGAGGGATGGCTTACTGCAGGGTTCCTGTTTTTCCTACTGAGATATGTAAATTAGGTACCCCAGCTGGATTGTTTGCACATGGAGGGCAGTGGTCCTGCTCAATTCGTCCTTACACAGAACTCAGTCTGCCCTCTAATAAAGATCCTACAAGTAGTGGTTTGAAGGAGACACCAATTTATTAGCCTACTCATCTCTGTTCTGAACTTTAGGGCTTGGAAATGAAGACACAGTCATTGATAGTTTCTCTTCCAGTTCTAGAATATTAGCCCTTAGTGTGTCTTCATTCACTCAGAGTAAGGGTTGTTAATTAACAGAGCAGATCAGGACTAACAGAGCTTGAATTCTTGTGGGTTGGGTGATCAGATCCTGTGTTGAATTAATTAGATGGAGACCAAGTGGAGTTGAGATTTTCAAAAGCATTTCACTGAAGGGTGATATTGTCAATTATTTGCAGATGAGGACATCAAGAAACATTCTTGGAATAATGAAATATAGAACTTGTGGTCATGTTCAATCATTTAAAAGATAGTTAAGTATCTACTGGACACTGTGGAGACTTAGGACCAAGATAAGCATGATTCCTACCCTCATGGAACTTACATTCTAGCTTCTCTTAAGTGTGAAGAGCAGTGGCTACAGAAAACAAATGGGCACAAAAATATTCTCAAGTCCAGGGTTCCAATTAATAAAGGATTTTCTGTTGCCTTAATCA EMBV3_12281 AGCGCCGGCATCCTGCGCACTCCCATCCAGATCCCCCAAGTCCACTGGTGAAACAACTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41369 GTTGGGGGCAGAATCACGCTGCACCTGGGGGACTGGAGTTGAGCTCTTTCCCCAAATAAA Gene GeneID:511235|PRRG2:NM_001034402:184_cdna Constitutive 0 NULL GeneID:511235 18 GENE PRRG2 MGC127653 proline rich Gla (G-carboxyglutamic acid) 2 EMBV3_03355 CAGGGGTAGCAGTGGTTGCTTTGATGGCGAATGCATCCCGTGTTGTGGAGCCGTATTTTT Gene GeneID:520709|IL1RL1:XM_002691181:80_cdna Constitutive 0 NULL GeneID:520709 11 GENE IL1RL1 NULL interleukin 1 receptor-like 1 EMBV3_06609 AGCCTATCATCCACTACCATTCAGTCATCCATTCATTTACTTCAAATAATGCGGAGGTGG Gene BVV0102_360300 + 0 NULL GK000015.2:64510276-64516951 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059816 TCONS_00059814 TCONS_00059815 TCONS_00059822 TCONS_00059812 TCONS_00059813 TCONS_00059819 TCONS_00059823 TCONS_00059821 TCONS_00059817 TCONS_00059818 1 XLOC_036520 Coding TCONS_00059814 XLOC_036520 Coding Coding TCP11L1 15:64478429-64514494 j TSS44807 7868 1 TCONS_00059814_6 509 0.110320284697509 10 0.78210958296362 0.000681147702464393 2.03118370474555e-08 0.000621728741408557 0.000335315576339304 0.000309941537088775 0.000145508834634155 8.68417734595521e-05 0.000278884536465838 0.000554435861846338 2.7703144185259e-09 8.71757708737576e-40 5.07875778862182e-21 2.68819966062223e-05 8.86304840127855e-06 6.74915939969241e-05 6.5456507582684e-09 6.32476373283564e-42 2.31419037821862e-08 0.000918422795483351 0.000559771002027355 5.42933044364214e-05 1.53111423260152e-05 1.18645305581795e-31 9.21194539176882e-06 0.00146984801847387 0.000685712756639473 0.000820077859843634 2.46444522890081e-11 4.70244913223765e-49 5.0388840097809e-05 XM_005216273.1 TCP11L1 PREDICTED: Bos taurus t-complex 11 (mouse)-like 1 (TCP11L1), 0.0 9512 100.00 0.670183019827148 NM_018393.3 TCP11L1 Homo sapiens t-complex 11, testis-specific-like 1 (TCP11L1), 0.0 2385 84.54 0.271733604473818 TCONS_00059814_6 sp|Q9NUJ3|T11L1_HUMAN T11L1_HUMAN T-complex protein 11-like protein 1; 0.0 900 87.03 0.99803536345776 1 coding 1 1 1 0 0.0420233166262376 0.797871364382984 0.00832029418501071 0.878741599121506 GTGATGTGTATTTTGCTTTGTTGCATAGGCAGGAAAGGAAGGCAGCTCTCTACAGTGAAGTGAAAGAGAAAACAGTTCATGATTTGAGTGAGGAAGTTTTTAGAAACAAACTACTTAAAATGTGGTGAGACCACAGCTGACGGAGCAACAGTGTGTGTACTTCCTGATTTGCAACTTTTATTTTGCACATAATGGAATAAACATCATTATTTGGCAACAAAACTAACAGCTCTCCTTCAGGGGAAGACAGAATTTTTTAGTTATATTCATGGTCCTAGAAGCAGCAGCATTCTAATACAATGTTAATTTCATGGACAATCTAGTAAAACCACAGTTTACCTCAAACTTCATAAGCGTAAAGTTTTAAGAAAATTGGTCATGTTTATGGTAAGCCCTGATCTGAAGGGCTTCCCTTGCTCAGCTGGTAAAGAATCTGCCTGCAATGTGGGGAACCTGGGTTTGATCCCTGGGTTGGAAGATCCCCTGGAGAAGGGAACAGCTAATTTAGAGACTATGGTATATTGGAAGGACTGATGCTGAAGTTCCAATACTTTGGCCACTTGATGTGAAGAGCTGACTCATTGAAAAAGACCCTGATGCTGGGAAAGATCGAAGGCAAAAGGAGAAGGGGTGGCAGAGGATGCAATGATTATATAGCATTACCGACTAATGGACATGAATTGAGCAAACTCTGGGAGATAGTGGAGGACAGAGAGGCCTGGCATGGTGCTGTCCAAGGGGTCATAGAGAGTCACCTTAGCAACTTAACATCAACACCAAAAAGTATATTCGTCTAGACTCTGAAGTGAGAACTGAATGTTTTCTTCCTAAATCTTAGTTCCAGTTAATATCTTATGGCACCCCCCTCCCCCCTCAAAGTGAATCCTCTTCTGAGAACTGTGTTTCAGGAAAAATTCTTACTTTAACGTAGGAATAACTGCCCATGTGTGATCTATTTAGAAGTGGCATTTGAAAGCAACTCCTAATTCCACTCCAGCTTGTTTTGTTCTAGTTATTTAACAAGTTTATAGGCTTCAGGTAAGAGGCTTGATTGTTACCTTCATTTTAAGGCACACATGTTTGATGTTCATTCTTAAAGCATTTTTCAAAAGAACAGATAAAAGTTATGAACTTTTACTTTTGAAGATAGACCCCTCACAACGATTTCTATTCGTGTAGTTTGCTGTCTTACTATACAGGCTGAGAAAAGCATGGTTTTCTTGGATCAGCAACTGTTCAGGGCTGCGACAGCCACGGCCCGGGCACCTGAGACAAAGGGGAAGGAGGCTTCAGAACAAGCTTGTCTTAACACGGTGTGTTTACTTTCTAGAATACATATGGCACATAAAATGCTGAGTGCTGTGTTTCTGAGCTCTCTAAACCGAGTTGAACCCTCGTGAGACGTCTTTGCCTCCTTGCCTTCCATCTTTTCAGGGCGAAGATCTCGCTCTTGCCGTCGACACAGTAGCGACCGCTTAGATAAAAGAGATGACTCAAACCAAATCGAATCTGTGCCGTTAAAATGAAATTTGGCCATCCCGGTGGTGGGCATGACTTTTTTTTTTTAACAACCAAAAACGAGGGGAGGGGAACAAATAACGTGGCTGTAAACCATGATGTAATATTTAAATTTGAAAACCAGGACGGGGAAGGCTTTGCACCGAAACAGCCAATCCTTTCGCCTTCCTCGACTGCCTCCGCGCCGCCTGCCCCGCAGCCCGTTTTTCCGTACAGAAACATGGCGCCGCCTTCTCTGGGGCGGGGGCCTCCCGGCTCCGAGTCACAGCCCACTGGGCCCCCGCAGCTGGCACCCGGCCGCACCTCCCGCCTTTCCGTAAGGGAACATGGCGACGCCCTACGTGGGACAGGCGCCTCCCGGCTGAGCGCTTCCTCCCGCTACCCGACACTGAGGAGCCGCCGCGCTGGCCGCTACCCACCCGAGCCCGGCGGGGAGGACCGCTCGCAGCGCAGCGAGGGATGCGGCCTCCGGGGGGCAGAGGTTGAACCGGCCCTTCCCGCCGCGCATCCTCCCCGCCTCCGCCGCCGCCAGATCCCCGGCCGAGCGGCAGGAGGGAAGACGCCCACTCCGGAGCAGGAAAGTGAATGAACTTAATTGAGAATGTCTGAAAACCTTGACAAGTCCAATATAAACGAAGCAGGAAAATCAAAATCAAGTGATTCTGAGCAAGGCCTTGAAGATGCTGTGGAAGTTTCTGATGAAGCTTTACAGAAAAAAATCAAGTCGGGCTCTCCAAGCACCCAAAGAGTGCAAAGACCTCACTCTAGTCCTCCTCGATTCGTGACAGTAGAAGAACTTCTAGAGACAGCGAAAGGAGTCACTAACATGGCCCTAGCCCATGAGATTGTTATAAATGGAGACTTTCAGATTAAACCCGTTGAGTTACCAGAAGACAGCTTGGAGAAGAGAGTAAAGGATATTGTCCATAAAGCTTTTTGGGATTGCTTGAGTGTCCAGCTAAGTGAAGTCCCCCCAACGTATGACCGGGCCATCAAGCTTGTTGGTGAGATCAAAGAGACTCTCCTGTCTTTCTTGCTGCCTGGTCACACTAGACTGAGAAACCAGATAACAGAAGTCTTGGACCTGGATCTGATAAAGCAGGAGGCCGAGAACGGGGCCCTGGACATTTCTAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCGCCTGTGCGAGATGAGGAAGTGAAGAAACTAAAGGACATTAAGGAGATCGTGCCCCTTTTCAGGGCGATTTTTTCAGTGTTGGACCTAATGAAGGTGGACATGGCGAACTTTGCTGTCAGTAGCATTAGGCCGCATCTCATGCAGCAGTCGATTGAGTATGAAAGGAAGCAGTTTCAGGAGTTCTTGGAGAAGCAGCCAAATTCCCTGGACTTTGTCACCCAGTGGCTGCAGGAAGCCACAGATGACCTTATGAGTCAGAAGTATAAAAACGCGCTGCCAGCTGCGGGAGGGGCCGCCGGCTCTGGGGACGGTCCCCAGCTGGATCCCGTGGCCGTGCAGAATTACGCGTACCTGAAGCTTCTGAAGTGGGACCACCTCCACCGGCCTTTCCCTGAAACAGTTTTGATGGACCATTCTCGCTTCCAAGAGTTCCAGCTCCAGCTGGAGCAGCTGACCGTCCTGGGGGCCGTGTTGCTGGTCACGTTCAGCATGGCAGCCCCAGGGATCGCCAGCCGGGCTGACTTCGCTGAGAAACTCAAGATGATTGTAAAGATTCTGCTCACAGACATGCATCTGCCCTCCTTCCACCTGGAGGACGCCCTGACTGCTGTCGGGGAGAAGGTCTGCCTGGAGGTGAGCAGCTGCCTTTCCCTGTGCGGCCTCAGCCCCCTCACCACAGACAAGGAGGCCGTGCTCAAGGGTCAGATCCAGGCCGTGGCCAGTCCTGACAACCCCATCCGCAGGATCGTGGATTCCCGAATCCTGACCTTCTTAGACGCCTACCTTGCCTCAAGTCATCAGAAGCCATCGCCCATAGCCCCTGGGGGATTGGGTCCGATTCAAAAAGAGCTGGAGGAAGTTGCCGTTAAATTCGTGCGCCTGGTCAACTATAACAAGATGGTGTTCAGTCCCTACTATGACGCCATCCTCAGTAAGACCCTCGCCAGATCCTAACACGTATAGTCCCTGTAGCAGCAGTATTACTTGCTCAACCTGTTCTCAGCTGTGATGTGGCTTTGGAAAATGGCTATTTAGTACATTTCTGTTTAATAGCACAGATTCCAAAAGGAAGAATATTGTGTATCAATGTTGAGAAGACTTGTTGGAAAATGCACTGAATTCTCTTTTGGGGGTTTGTATTTATGAGCGCAAGTTTACATCAGAGAGGCTGTTGTCCTGAGTTTCATAGGCAGCACTCAGCTTTTAACAGGACTGTCCTGTGTATATCACGGTTGTAGCTGCCTGTCTCTCCCTCAAGTCTGGGACTGCTCTTCTGCCATCTGGGTTGTTTTTCTTTTAGACACCCGAGAGTATCTGCCAGCTACCCCAGAGTGAGAAGCCAAGCCGTGGTGCATTTAGACGCGCCCCTCTCTTGCACAGCCCACCCCTCCTCCCTCCAGGTATTTAAGTTAGAACTTTATAAATCTTACTGCCTCCCGTCTGCCCCCCTCGACCCCCAGTTATTTATTGCTTTCTCCCCTCCTGGCCCAGCCAGAGCCCTGGAATCCTTTCATTCTGGAGGAGTTATTAATACTTGATTTAAAAAAGCTTTCTCTTTTGTACAAAATTACTTCTGAACCTGGATGATAGTGTTTATGGGATGTAGAGAAAGGAAAATTCTTTGATTTTTATGTCTTGAAAGTTGAGGAATCTTTAAAAAAAATATGCTAGTGTAATATAAAAGAAGACAGATATCGGAAGTTTTTACTGAAAAGTTCACCCTGATACAACACCTTGAGGTATTGACTGAATTCGAATTCCAGAATTGGATTTAAGTGTTTTCAGATAAAATAGCATAAGCTCACTTACTTCTCAGGTAATGAAGTTATAGGAAATCTCTGATTTTCGAGCAGTATTTATCTAGGAACTTGAGTGACCAGAGTTCCTGACATACCCTGTGGCTGAAAGGGTAGCTTGGGGTCTCATAGATGACCTGTTTTGTTAAAGAATAAATGTGTATCTTAGGGATGTTATGTGAGAAACCGAACTGTGAAGTCATTGGGGTGATCCCCAGCTGCCAGAACCACAGGGGTGGCGTCAGGCAAGGAATCCCTTCATTCAAGCCCATAAGGGTGGGGGTGGAGCTGAGGACAGGGTTGGGGAAACATCCACCCTGTGGACCATCTAGTGATACCAGGTTCCAGAGGAGCTACTGGTTATACTGGGAGGGATGTGATTTCTCCATCTATTTGCTTCAGACTGCACTCTTAATATTTTTACTTGCAGTCAGAAATGTAAGCTGGGTTCCATGGTCAGACGTCATATTAATAAAGTTTAGTCTCAAGGACAAATCCTCCCTGGTTTCCTGGGAAGAGGTTAAAAGCTCAGTAAGTAGAACTTTTAAAGAACAAAACCACATCCTCTGTAGCGCGTTCAGTGAAGTCACCTCTGGAATTGTTCCTGGAGGTCAGGCTGCCGTGGCAGCTGCGCTCACTGGTCGTAGAGAATGAGGTTCAGTGGGCAGGGCGGGGGGGCACTCTGGCTTGCTTCCACCTCAGTGTTCAGGGGTTCCCCACCCCATCCAAGGATGTAGGAAAGGGGTGTAACCCCCCGATGCAGGGCGAGTCACCACCTCCTGTAGCCATTTTCCCTAAATCTCCAGAGTTCTTCATTCTGCTTCTTTTGCAAGAATTAACTCTTAGTAGATTTTTTTCCCCCTCATGGGTTCCTACATGGATAGAGTGATGTTTGGACAGTTTGAAATCTTGATGCCCATGTAACAGGGAGCTTCACAGACTCCTGTGGCCCCCACTACCTCAGTGTCCCCTGGTGGAATTCTACAAGAGCCAGAATGAAGACAGTAAAGTTCAGAATCATGATATTCATATTGAATCGTTTTGCTGTTGCTCTTTGAAGATATGTGAGCTAGTTTTTCTTCCTGGAATCTCATAGGATTATCACTAAGGGCTAGGAAGATTTGTTTATTTAGTCACTCAGGAAATGTTTGCTAAGCATCTACTTAGAGCTCCCCCAATCCAGGGTATTCTGTCCCTCCAAGACAAAATACCTTTGGCATATAAATTATCCTTCAGAATTGAACTGGTTTTATATATATACTGCATGCTGGTTGGATTTGACATGGTTTCCTGCCCAAAAGGGTTTGTGGAAAACATATCTTTCTGGAAGTGCTAAGTTTATTTGGCAATAGTACTTCACTACAAGTGGGTAGAACTGAGGGCCTTGAGAGCTGGGTTGCGATCAGCAGGTCAGCTTGATTTCTCTGATAGTTTCCTAAATGAATGAGTGAGTGAATAAAGGTCTAGAAGTCAGCTGTCAGTTGATGAGGTGACTAGTGGGTGGCGTCTCACTGTATGAAGTTTTCTTTTTTTAATCTCGTTAATTCTAAAGCAAGCTGTAAAATGTGATTGTTCATGTAATGTAACCCTATAATCCACTTCAGGTAAGAGTTACACTGATATATCTTACTGATTAATGCAGTGGACAGGTATATAGAAACTTTTTCTCTATGAAGAAAAGTTATTAAAAAGTTTGACTCAATAGGCATAAAACGTGCACATTACTGGCTGACAGTTCTGAATGGCTTATTTAGCAGTTCTGTTTTTGTGGCTTATTTTAATTTCTCCAAAGTCTTAAGATTCCTGGGAAGAGAGCAGCCTCATTTCCTGCTGAATTTCAAGGGAGTGAATAGGTGTTTGCTGTTTGACTTCCAGTGATCTTTTGACTTGCCTTGACTTGTATGTAAAGCACTTGTATTTCTTTTGAGGCAGAACGGTAGAGTGGGAGGACTGAGAGCTGTCAGGAAACCAGAGCTCTAATCCCATTTCTGTCATGTGATTAGCTGGAGCAAATCGGGACCCATTTCAGTACCCATAGAATGAATGGACTAGAAAAGGGCCTTTCAAGTCTGACATTCTGTGATGAATTTGACTGGAATAACTGAAGTAGACTGCGGTCAGATTGTGCAGAGAGATCTGACTTAGAGGAAGATCTGGGTTGAGTCGTTCCTCTGTTGCCTTCTTGCAAGGAAGGCTCTGTGACTTTGGGCCATTCTTCCTTAGGCTTTGTAAAACAAGAATACTAATTCACACTTCCTGTGAGGATTAAATTTGATAATGGATATTAGAATGCTTTGTACACACAAAAGAACTATAAATGGCTTTATTAGCAACAAAGGAGAGTATTGTAACCTTTTTGCCTGTAGGTGATGACAGATTTGACTGCAGGTGCCCAGCCTCCTTCAGTCAAGCACGTTTTACAGGCCTGTAGGGAAGGTTTTCCTCCTGTCCTGTCCCAAGACTGTTATTTTCTTTTATCATCTCTTCTGTACCAGAGCTGCAATCTTACTTCTCTTATATGCTGCCACTCACCTGCACTCCAGTGATTTCTCACTTCCACCTCCGCATTATTTGAAGTAAATGAATGGATGACTGAATGGTAGTGGATGATAGGCTATGAAACTCATATTAAAAGGCACTATCTCATTGAAAACCTAAATAAAGAATTACAGTGATGTTTGCAATTGTGTATTTATATTGGGTTTTATATACCTATTTTAATGGTTTGCCTTTTTATTCATTTTTCAAAGCACCTTCATGGGACGGGGAAAGGGGAAACTTTTAAGCCTGAAATCCTCTATTAACCTACTGAATGTTCACTGATACTTTCAGAAAAAGCTCGAGTCCTAGAAATGTGTCAGAAACTTCAGCAGGCAGAATTTTACCTAAAACTGCCTTTAGTGTGGATTTCTGTCTTACCTATGTTGCCTTCTGAACTAACATATAGTTTAGAAGGCCCGATCTGATGGAATGTAATTTAGAAATCAGTTGTGTCTGACGTTGGTATCAATAGTCAGACTTCACCATTTTTCTATTTGTTTTATCTGAACTAAGCCTAGCTTCCCTGGTGGCTCAGGTGGTAAAGAACCTGCCTGCAATGCAGGAGACATGGGTTTGATCCCTGGGTAGGGAGAAGGAAATGGCAACTCACTCCAGTATTCTAACCTAGGAAAATCCCATGGACAGAGAGCCTGGCACGGGCTACATGGGATACATGGGGTCACACAGAGTCAGACGTGACTTAGTGACTAAACAACACCCCATCTGAGCTAAACATTGAGAGCCTTTAAGTGCAACTTTTGACTTAAAGCAGCCTTAAAATCAAAGTAACACTTTTTTTCCTTTCTCATTCTCATTGCCTCTGCTTTCTGAAGTAC EMBV3_24912 TGGGGTAGAAGCACAAAGTCTTGATCGCTGGACAACCAGGCAAGTCCCTCCCATCTCTAA Gene BVT0102_030901 + 1 EMBV3_27778 GK000017.2:68436274-68445519 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081662 1 XLOC_050541 NonCoding TCONS_00081662 XLOC_050541 NonCoding NonCoding - 17:68441935-68442503 - TSS61602 568 0.28169014084507 1 0 0 0 3.2584464179006e-05 0 0 0 0 0 0 0 0 0 0 0 0 0.000883488740879493 0 0 2.52496930836809e-05 0 0 0 0 0 0 0 0 0 0 0 XM_005196580.1 C23H6orf89 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf89 (C23H6orf89), transcript variant X1, mRNA. 1e-16 91.5 76.67 0.200704225352113 0 noncoding 0 0 0 0 0.0453202862508289 0.790586285966614 0.0140961429250627 0.859558775895476 TTCAAGGACGCAAATAATCTCCACTTAGTTTCTTCTTAGACCTGGGCAGGTTGTTTCACTTCTCTACACCTCAGTTTCCCATCTCTACTGGTGTATCATTTTTGTTTGGCTGGATAGCAAGTGGGATCTTAGTTCCTCGACCAAGGATTCAACCTGCACCCCCTGGGGTAGAAGCACAAAGTCTTGATCGCTGGACAACCAGGCAAGTCCCTCCCATCTCTAAAATAGGGATAAAGCTAGTACTGCTCTGAAAGGCGGTTCCCAGGGCCAAAATAAAAGGCGGGAGAGTGAGCTAAGTAACGCACGTAAGAAGCTCCTAGCTGTCAGATCTACTCTGATTGAGGAGACAATCGCGTGTCTGCGTGGACAGCCTCGAGCCTCAAGGACAAGTGGTTTTTCCAGACTTTTGGACTCAAGTGCTCAGCCTCCGGAAAAGCCAGGAGGAAGGTGGCCAGAGGTTTAGTTTGGGAATTCTCAGATCCAGCCTGGTCTCCCAGAATTCCCCAGATAAAACCCTTCATTTGGGGCCCAGGGGCATCCAGGCCCATGTCTAGGTTCCCAATGAGGT TCONS_00078013 TCONS_00078014 TCONS_00078015 . 3' 2950 TCONS_00078013 TCONS_00078014 TCONS_00078015 . 3' 3517 EMBV3_36917 CCCTCATTTGAGCAATACTCTCTCATTTTTTCTGATGTCTGGGGTGATGGGCGGGCCTGG Gene GeneID:518023|LEMD2:XM_002697182:229_cdna UTR3_Alt 2 NULL GeneID:518023 23 GENE LEMD2 NULL LEM domain containing 2 EMBV3_35688 CTCGGCTCCTCCGCAGCAGAGCTCCTGTAAGATACGCTGGTCAAAGCTTCTAGCAAATTT Gene GeneID:100174927|LOC100174927:XM_002686880:70_cdna Constitutive 1 NULL GeneID:100174927 4 GENE LOC100174927 NULL hypothetical LOC100174927 EMBV3_08596 GTTAACAAGTTGGAACCCGACCTTCCCTGAAAGGCTGATGCGTGTGATGAATGTGCTTGG Gene BVV0102_175767 + 0 NULL GK000004.2:31212685-31401864 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00186652 1 XLOC_112704 NonCoding TCONS_00186652 XLOC_112704 NonCoding NonCoding - 4:31265162-31265841 - TSS139020 679 1 TCONS_00186652_1 79 1 0 0 0 0.000109030938137978 0 0 0 0 0 1.16202345574734e-05 0 0 0 1.26772580511357e-05 0 0.000274573571819223 0 0 0 0 0 8.94176798677925e-06 0 0 0 4.08158399769846e-05 0.000274970896349508 0 0 0 0 0 noncoding TCTTCACAGCCTGGCCCCAAATCGTAATTACTAATCCCATAAATGGTTTTCGCCTAAGAACTTCGAAATAGGCTCTGTATTCTGCTACGAGTCAAAGAGCCCCCACGCTGTCCTCTCTTTGGCACATTCATCATTAAAGTCTAAAACTTTTGTTCATTATGATAGGTGTTGAGCAAAATAGATGCAAGTCTGGTGACCTGGAGGTGATTCTCTGTTAACAAGTTGGAACCTGACCTTCCCTGAAAGGCTGATGCGTGTGATGAATGTGCTTGGTAAAGCGTAAAGGCCTGCCGTGGTGTGAATCATTGTTTACACCATTCCAGGAGGCAGGAATTGTGGAGCCCTGGCAGCAAGACTCTTCCAACAGGGCCTTAGTCCAGATGGCTGTGAACCTTCACCTCCCAGATCAATCTGTCTTCAGCAAGGGGCAGCCAGTAGTTTTACTCCTTATCAGTAGGACACAGGGCTCCTATCTTTGCCTAAGACTTGCAAGAACTGAATAAAGTTACTCACCTTAGAAAAAAAAAGTTGACAACTAAGGATTACAAGGAATCAGGGCCCTTTGTTGGTTTATGTTGGTCTACCACTATACTCTCAGCCCTCATATGGCAGACAACTGGCAAATATATATGGAAATATGGCCATGCAAGGAAAAAAGAATGACCTGTGAACTCTGCCC TCONS_00183531 . 5' 389 TCONS_00183531 . 5' 389 EMBV3_10811 CTCATGTCTGCAGCTGGATGTTTGAGGACATCGGGAAGACAGGGCAAGAGTTCAGCATGT Gene GeneID:617402|LOC617402:NM_001078075:50_cdna Constitutive 0 NULL GeneID:617402 13 GENE LOC617402 NULL cystatin EMBV3_34736 AAGTCCAGGTTTCTGAGTTGTCCGACTTGTCCATCTTCCTCGCATCTTTGGGGAGTTTCG Gene GeneID:524299|IL12RB1:XM_002688570:257_cdna Constitutive 0 NULL GeneID:524299 7 GENE IL12RB1 NULL interleukin 12 receptor, beta 1 EMBV3_16497 AATCATTTATTCCACCAGCCTTACCTTTACCTATACCCCAGAACCAGGGCCACGGCCACA Gene GeneID:767928|RBPJ:NM_001077001:210_cdna Constitutive 0 NULL GeneID:767928 6 GENE RBPJ MGC128782 recombination signal binding protein for immunoglobulin kappa J region EMBV3_26893 GCCCACTCAAGACTCATGGGAGAAAGAGGAAGTATCCAGACCTGTTTTGGTGAGTCAAGG Gene BVV0102_341457 - 1 EMBV3_23356 GK000005.2:101757821-101761244 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201330 1 XLOC_122977 NonCoding TCONS_00201330 XLOC_122977 NonCoding NonCoding - 5:101759323-101759635 - TSS150898 312 1 TCONS_00201330_1 81 1 0 0.000479687117268047 0 0 0 1.58242686256205e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000115247378940413 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0649620679364713 0.660021343234005 -0.0296343922086436 0.656880920007946 CTCAGCATCTTCAGTGTTAATGCTTTAATGATACTGATGTATTTTTATTTCTCCTATGAGCTTATTTCATCTTAGAGCCTTTGCACAGACCAAGGTCAAAGGTCACTTCCACTGCAAAGACTTCCTTGACTCACCAAAACAGGTCTGGATACTTCCTCTTTCTCCCATGAGTCTTGAGTGGGCATCCATGAGAATACTTATCACCATGCATTTCACTGTGTTTTGCCTACATCCCTCCCAGATAACACATTCCTTGAGGGTTGTGAATCATATCCTTTTATTTAAGTATCTTTCATTCTAAATGCTAAGAAT TCONS_00196110 . 5' 1274 TCONS_00196110 . 5' 1274 EMBV3_14966 CTTCTGACCATCAAGTGCCTGCTGATCCACCCCAGCAGGGGCTGAGGGGCCCATGGCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06656 TCAAACCCACAAGGTCTGGCTCTGAAGATGCTAACCATCCTACCTCTGACACCATATCCC Gene BVV0101_020021 + 0 NULL GK000014.2:32214254-32299496 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41546 GGGGGTTGGTACTAAGATCCTCTTCCTGGTCACTGACAGAGTACTGAAGCTCAGGAAATC Gene BVT0102_021703 + 0 NULL GK000030.2:60806495-60850172 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247117 TCONS_00247116 1 XLOC_151233 Coding TCONS_00247117 XLOC_151233 Coding Coding TEX13B X:60843084-60851825 j TSS185139 1295 1 TCONS_00247117_3 199 0.0247104247104247 5 0.852402745995423 3.18891164935671e-10 0 3.91958597994984e-22 2.65277453820116e-10 0 0 0 0 0 2.17012324255963e-109 0.000195334724603726 1.67632591318206e-05 2.21566347316566e-06 0 0 0.000985301609179921 5.31868401472996e-05 0.000193750065422492 0.000178192334920623 0 0 0.000413337769944098 0.000274747801510415 0.000485720374340141 0 0 0 0.000101182917375908 0.000128301353259943 5.62634527316136e-05 XM_002707878.2 TEX13B PREDICTED: Bos taurus testis expressed 13B (TEX13B), transcript 0.0 1725 100.00 0.737451737451737 NM_031273.2 TEX13B Homo sapiens testis expressed 13B (TEX13B), mRNA. 3e-79 300 68.34 0.601544401544402 TCONS_00247117_3 sp|Q9BXU3|TX13A_HUMAN TX13A_HUMAN Testis-expressed sequence 13A protein; 2e-29 114 54.86 0.708542713567839 0 coding 1 1 1 1 -0.00850539633983882 0.944842442459316 0.0354602709467943 0.582607106331356 GCTTCTCTTTCCTTGGCGCCTTCCAGGAGAGAGAGGTACCTTTTGAGTGGGGTAGGCGGTTTTGTTTGGCCTGTACTCTCACTGGCCAGGAGCACGAGGTGGAACGCAAGGAGGCGGCCTTCCGGCTGCAGCTGACCCAGGCCACCCTGGCGGAAGTGCAGAAAGAGCGGGACCTCCTGAAGTGGAAGCTCTTTAAGACCGAGCTGCAGTCAGCCCAGGCGCCAGTCGCAGAGGGGCCAAGCTTGGCCACTGCCGGTGGGGCTGGAATAGAAGGAACAAGTGAAGAGGAGGAGACAGGGGCCACTGCTACTACTGCTGCAGCTTCTGAAGCCACAGGAGGAGGAAAACAGGAGGATGCAGAGGGGGTGGAAGCTGCAGAGGGGGTGGAAGCTGCAGAGGGGGTGGAAGCTGCCGAGGGGGCACAAGATCTGAGTGTAGACCTTATGCAGCTTCTTGGAGTTGTAGACCAGAAAAATTACACCTCTGGCGGGCAGAGGGAGGGAGGTTTTAGGTCAGTGGAAACAGCCATGTATTCTTTCTCTGGGATGCTCAAGCCCGAGGCAACAGTCTCACCTCAACCCCTTCCTGTCCAGCTCCCTGCCTCATTCACATACTCATACTCATGCCCCTTATCCCCCTTCTCAGATGCACCAGCACCATCCCCATCCACATCTCCACCACAAGCACCATTCACAGCAGGAGCTTCATTTCAGACATCTCCCTACTGGGAATCCTCTGATTTTAGCTTGTGGTCTGATGGAGGGATCCAAGGAGTAGACCCTCAAGAAGGATACAGGAGCGACTCTGATCCCCTTCAGCAGCTAAGACTTCCAGTATTTCGCAGTCCTGGGAATTGGGACTGCCCTTGGTCCCACAGATGGAAGATGGATCAAACTGAGACAAATGGACATCACCTTGGACATCTCCTGGGAACTGTTGACCTAGATACTGAAGCTGTCATAACCTGGGACACCTCTGCAGTAACTGGATGTGACTTTGGGCTATATCCGGTTAGAGCAGATGTTAACAGTCATCAGGATTAGAGGGGGTTGGTACTAAGATCCTCTTCCTGGTCACTGACAGAGTACTGAAGCTCAGGAAATCCATCAAGAATGAACAGAAGCTTCTCTGGATATACAAGAATAATGTCCATGATTGGTCCACCTGTATCTTGAAAAGTGTTATTGATCAGGTCAGCACCACTAAGGTTAGCAAAACGGCCATCTCTCTGCAGTTGATATAAATGACATAGTCAAATCTGCCTGGAGTAACCACTCCTGCTGCCCAGTCAAACA EMBV3_36630 GACCCTGACATTTTGGATGTTGTTGGGAGACAGGCTTTCTCTAACACTGGGATGCTGGTG Gene BVT0102_297270 + 0 NULL GK000005.2:68842781-68866723 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23021 CACATTTAAAATTGAGAGGAAGATAGATACACACCCTTAACCAGGGAGCCGTATTTCTGC Gene BVV0102_305716 + 1 EMBV3_27078 GK000003.2:60449088-61169974 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18150 GTTTCATTGTAGACACAGCCCGTAGGTAAACCCAGGTTTGGTTCAACTCGCCACTGCAAG Gene GeneID:504291|MITD1:NM_001110063:26_cdna UTR3_Alt 1 NULL GeneID:504291 11 GENE MITD1 MGC128843 MIT, microtubule interacting and transport, domain containing 1 EMBV3_07386 TACCGTAACTTGAAGAGGAGCTGACGGTGTCATACCTGCCTGGGGAGGAAAAGTTTCTGA Gene GeneID:783163|LOC783163:XR_083832:1594_cdna Constitutive 0 NULL GeneID:783163 13 PSEUDO LOC783163 NULL similar to protein phosphatase 4, regulatory subunit 1 EMBV3_05385 ACCCCCAGGACCCCATCTCCATGGGCAATGGAGCTGGCTCTGGGGTGCCCTTCCACTGGC Variant GeneID:100139040|JMJD8:XM_002697969:700_cdna 442^561 1 EMBV3_07902 GeneID:100139040 25 GENE JMJD8 NULL jumonji domain containing 8 EMBV3_23419 GTGGTATATTAGTTCAGTTGCCACTGCCAGGTGATGCAACTGTGACAATAGCTCACAGAT Variant GeneID:536269|MTHFD2L:XM_002688352:145_cdna 501^761 3 EMBV3_18914 GeneID:536269 6 GENE MTHFD2L NULL methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like EMBV3_01427 AGAGATAGATGGTGGACATGATTAGATGGCTGATTCACAGTTTCGGCTGGTCTGGGTCCC Gene BVT0102_097667 - 0 NULL GK000003.2:30117830-30318804 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169385 TCONS_00169380 TCONS_00169381 TCONS_00169383 TCONS_00169386 TCONS_00169384 1 XLOC_103348 NonCoding TCONS_00169384 XLOC_103348 NonCoding NonCoding - 3:30148897-30156453 - TSS126836 1256 1 TCONS_00169384_3 95 0.0589171974522293 4 0.834281932495036 0.000914216758786373 0.000266887387726572 0.000654008861029163 3.03370450283008e-19 1.64713466985087e-05 9.26509905532086e-11 0.000759572670749315 0.000262017218933756 6.4990955216509e-05 1.55249145151642e-07 2.42505374667197e-05 0 2.30483568020089e-09 0.000430453164736258 0.000284048305828407 0 0 0 5.56716938244136e-05 0.00109371288961653 0.00042174125959302 0 0 9.54446458924240e-10 8.84218611118643e-07 0.00167193501934533 0.000732003062498823 1.74007548375553e-05 2.70498691819333e-05 0 0 noncoding 1 1 1 1 -0.226331518175599 0.0819986337662373 0.0487402927204903 0.484032099728801 CCTAGAATTTCTGATTCAGAAGATCTGGTGCAGCCTGAGATTTTTCATTTCTAGCAAGTTCTTTGGTGATACAGAGACCAGCTTTTGTACTCCACTAACTGTCCTAGAACAAGACTCTGCAAGACACTTCACTGGTTTTATTTAATTCGTATCCATGAGGAGAGCTGTCAACATTCCATCCTGGAAAACCTTTACTAAGATCGATGTTTCCACAAACATCGATTTGACCCTCCCATTCCTCATTCCAAAACAATGGACTCACATCACCCAGAATTCCACTTTGCTGTGATTAAATACACATAAAGAACTCTTCTTTCCTATAGCTATCCACAGGAAATGTCTGTCACTACAGTATGCACCAGAATTCAGAGTTCATACATTGGAGAATTCTGTGATGTCCAGGGTTCTACATCACTAATAGGTTCTGAGGAGTTGTGAGCAAATTTACTAAGTGTCTTTCCTGTTGGTTCAACGTGGGTTCTCACAAATGACCTGATTCTACAGCAAATATCTATTACCTCTTGGTGTCTGTTATCTACTGACCTATTTCTCTAGGGGCCACTCCTTTTCTATCTTCTCATGTTGTTGAGGTGTTTAGTGGCTTCTATTTCTGACCTCATTTGCAAGAGAAGTGGAACAACTTAGAAAACCTAAAGCAGTCTCTAGAGAGTTGAAAGCAGACTGGTGAATGACATCATAACTCCAGTGAAGGGATTCAACAAAGGTGGGACCCAGACCAGCCGAAACTGTGAATCAGCCATCTAATCATGTCCACCATCTATCTCTAGAGGAAGGAATTTAGTGGATACAAATAAAGTAGTTGGAACCCTATGGCAAGTGAGTTGCAAACTTCTCTGTTGACTAAATTCTACTGCATTGACAGGACCCCCTTCCCGGTTCTAACACATCCTTTTAACAATCTCGGTAGCTTTGACACTGCTGTTTCACTAATGTGGGCACACGCCTCCCCATCCTTATCTCTTTCCACCAAATCACCCATTAGTAGCTCAGCCTTGTCTCAGTCTAGATTCCCTTCACTTGCCCTTTCTCCCTCACCCCCAACACCTCTGACTTTTGTTTCCAACCAACATACTGTGGGAAAATGTATTCAGTCTTAAGATTCCAGGGCCTCCCTTGCAATTCTTTCTGGACCCTGTTCCTTTCCCTACCTCCTGTTGACTCAGTGGGCTGGGGGCAGGGTCTGCTCCCCATTTTCTTTCCTAAGCCATTGTTCCTCCAACTTGTGTCTCCATGTC TCONS_00172795 r 5' 200 TCONS_00172795 r 5' 200 EMBV3_03556 CTGAAGTTTAGAGGAGAAAACAAATTCACCCCTAGAAGCCAGTGAGCTGTGGCTCCACCC Gene GeneID:530709|USH1C:NM_001035382:152_cdna Constitutive 0 NULL GeneID:530709 15 GENE USH1C MGC127911 Usher syndrome 1C (autosomal recessive, severe) EMBV3_15014 TGGGTAACAATGATGACCTGATCCTCTCCTGCTGCCTCCACTACTGTAAAGACAAGGCCA Gene GeneID:516411|SMG6:XM_002695687:231_cdna UTR3_Alt 2 NULL GeneID:516411 19 GENE SMG6 NULL Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) EMBV3_05020 TGTGGCCATAGCCCAATACGAATTGCTGCTTGAACTACAGAGATCTAGAAATGTGTTCGG Gene GeneID:281358|NPR3:NM_174127:4_cdna UTR3_Alt 2 NULL GeneID:281358 20 GENE NPR3 NULL natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) EMBV3_38809 CCACCTGAATGCTTATGACCAAGCGGGAAATCAACGTATCTAGTATTTACATCCGACACC Gene GeneID:614345|ARPC5:NM_001035447:32_cdna Constitutive 0 NULL GeneID:614345 16 GENE ARPC5 MGC127179 actin related protein 2/3 complex, subunit 5, 16kDa EMBV3_31783 AGTATTGGGCCGTTGCTCTGCCTGTGTATCTCCTCATTACCATAGTCATCGGTTACGTCC Gene GeneID:767951|PIGP:NM_001077022:87_cdna Constitutive 0 NULL GeneID:767951 1 GENE PIGP MGC133558 phosphatidylinositol glycan anchor biosynthesis, class P EMBV3_35715 TGAGAGCTGCTATGAGGGCGTTCCAGGAGCACTGTTGGTCATGCAATAGGAGAACAGAGA Gene GeneID:788729|BCL9:XM_002686086:25_cdna Constitutive 0 NULL GeneID:788729 3 GENE BCL9 NULL B-cell CLL/lymphoma 9 EMBV3_40717 TATTGGACCATTCCAGTTGGTGTGCTGTTCTCATCGTGTAGGCCGATTTGCCTGTCAGTC Gene GeneID:513262|TEX2:NM_001101970:2_cdna Constitutive 0 NULL GeneID:513262 19 GENE TEX2 MGC148486 testis expressed 2 EMBV3_05148 GACCCCACCTCTCCAGCAAGACTTTTCAGTTTGCCTTCTCCCCTCCCCATCAACTCTTTA Gene GeneID:537810|AKAP6:XM_002696702:89_cdna Constitutive 0 NULL GeneID:537810 21 GENE AKAP6 NULL A kinase (PRKA) anchor protein 6 EMBV3_04264 GATTGATGAACATTTTGTGGCAGATTCAAGAGCCTTGTCCAGCAGAAGCCTACTGCCTAT Variant GeneID:787488|AFF3:XM_002691147:172_cdna 544^865 1 EMBV3_35201 GeneID:787488 11 GENE AFF3 NULL AF4/FMR2 family, member 3 EMBV3_43571 TACACCCATGTTCTCCTTGCCGTCCTGAAAAAGAAGTCTGCAAAGGGCAGGAACAAAGCC Gene GeneID:783690|LOC783690:XM_002684674:29_cdna Constitutive 0 NULL GeneID:783690 1 GENE LOC783690 NULL similar to Olfactory receptor 5AC1 (Olfactory receptor OR3-2) EMBV3_02872 GCAGATCATGACTAGAGCCCAATGTCCAGCTCATCAATTTTCTTCACTCTACTACATAAC Gene BVV0102_010039 + 1 EMBV3_41295 GK000026.2:2900883-3504200 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32342 GTGGTCTGCATGAGCAACATGAACAGGAGCATGGAGGCCCACAGCATTCTCAGGAAGAAA Gene GeneID:517056|LOC517056:XM_002693389:27_cdna Constitutive 0 NULL GeneID:517056 15 GENE LOC517056 NULL similar to hCG1991759 EMBV3_13139 TCTGAGAGGAAACCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCTAAGTGCAGCCA Gene GeneID:513450|SFXN2:NM_001034446:123_cdna Constitutive 1 NULL GeneID:513450 26 GENE SFXN2 NULL sideroflexin 2 EMBV3_33019 CTGCCTCTCCAGAGTCCAGCCAGGAGGGGAATACAGATGACAGTACCTCCCAAACCCTGA Gene GeneID:520964|LDLRAD2:XM_002685786:630_cdna Constitutive 0 NULL GeneID:520964 2 GENE LDLRAD2 NULL low density lipoprotein receptor class A domain containing 2 EMBV3_08380 CAGTCTGAAGTCTGGGAAGGTTATACCTCCAGGTTTTCTTTTTTTTAGGATTGCTTTGCC Gene BVV0102_459916 + 1 EMBV3_02622 GK000002.2:1104772-1162440 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08097 ATGTGGGCATGAGAAACAGAAGTGGGCTGCTGGGCTTAGTCATGGGCCAAGGAAGTTTTA Gene BVT0102_285149 + 0 NULL GK000010.2:55179465-55716593 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32328 CGCTAGTACTATTGTCTTAGTTAGTGTAGCTATATAAGTGTAGGAATCAGGTAGTACCAG Gene BVT0102_101230 + 0 NULL GK000013.2:28169525-28176260 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042379 TCONS_00042380 TCONS_00042375 TCONS_00042376 TCONS_00042385 TCONS_00042381 1 XLOC_025655 Coding TCONS_00042381 XLOC_025655 Coding Coding MCM10 13:28132600-28171854 j TSS31560 5789 1 TCONS_00042381_4 870 0.400760062186906 21 0.853055817389754 0.000958402672993293 0.000619703884271814 0.000337210571290371 0.000859692505065816 0.000250405069575353 0.000227104693355799 0.000229326973369701 0.000355675111186158 0.000489542192508076 2.95699857256578e-05 9.36702474726109e-15 1.01893852455025e-05 0.000124793271205478 1.1349051200508e-05 1.29112529781099e-05 0.00107440277037635 0.000441189075097416 0.000763937007723459 0.00022245665308715 0.00163312215601109 0.000385754607463875 0.000110201053664477 0.000182345388493852 0.000714707303736967 0.000535629460452399 0.00048623444070218 0.000338915648857053 8.89972805071378e-06 0.000127580352974105 0.00021090522324726 XM_005194297.1 MCM10 PREDICTED: Bos taurus minichromosome maintenance complex component 10 (MCM10), transcript variant X2, mRNA. 0.0 8033 99.93 0.770253929866989 NM_018518.4 MCM10 Homo sapiens minichromosome maintenance complex component 10 (MCM10), transcript variant 2, mRNA. 0.0 2985 84.42 0.467438244947314 TCONS_00042381_4 sp|Q7L590|MCM10_HUMAN MCM10_HUMAN Protein MCM10 homolog; 0.0 1425 82.17 0.998850574712644 2 coding 0 0 0 0 -0.274770413932486 0.179808567840908 -0.182191726422106 0.0634562519170185 GTGAGGAGCCGGGTAAGAAGCGGGTCTGCGAGTATTGAGGGGTAGGTTGAGGGGCCGCCGAAGGCGTCTGTGTGAGTTTAACGAGCTCCTAGGGCGAGAGGCGCGGAGCTCGGGGGCGCTTAGCCAAGGTTCTGCACTGCTGCCATCTCCTGGGCACCTGATACTCCTTCAGTTTTCCATCACCACTGTTCACTTGACAGCATGGATGGGGAGGAAGATGATTTGTCTCTGCTGACTGCATTGCTGGAGGAGAATGAGTCGGCCTTGGGTTGTAATTCAGAAGAGAGTCAGCCCTTGACCCAGGAAGATGGTGAACCTGACTCATATGATGAGCTCTTTGATGCTGATGGTGATGGTGAATCTTACACAGAGGAGACTGATGAGGGAGAAGTGGAAAAGGCTGAAAACCAAAAGGAGAATTTGGCCACTCTCTTTGGAGACATGGGAGACTTAACAGATGAGGAAGAAGCTCCTACATCACAATCAACTAAAGAGAGGGTCGTCCCTGCTCCTGGTCCCAGTCAAGGGAAAACTAATCAGGAGTTGCAAGATGAATTAAGGAAGTTGCAAGAGCAAATGAAGTCCTTACAAGAACAGCTGAAACTAGCGACAATTAAACAGCCTGCAAGTCCAGCCCTTTCACGTAAAACCCCAGATAAGTCTCCACGTCCCCCTCTTAAGGAGAAGAAAATTCAGGAGTCATTGTGCTTTTCTGCGGAACTTGACGTCCCTACTCTACCAAAACCCAAGCGAGTGGCTCGGACACCAAAGGTCTCACCTGCAGAGCCCCAATGCTCACCTTTGAAGATGACAAGTGTACCCTCCCAACCACTCCGAACAACTCCTGGGAACAAGCCTGGTGGGGTGACTAGGGATCAGAGTGCAGGGACACCCAGGAGCTCTGGGGAGATGGCTCAGGAAGTCTCCGTGGAAGCCTTCTCCGGTCTGAGGCTCAGAAAGCCTCGAGTATCCTCCACAGAAATGAACAAGAAAATGATCGGCCGAAAACTTATCAGACTGTCTCAGCTCAAGGAAAAGATGGCAAGTGAGAAGCTGGAAGAAATAGACTGGGTGACGTTTGGGGTTATATTGAAGAAAATCACTCCACAGAGTTCTAACAGTGGGAAAACATTTAGCATCTGGCGACTGAATGATCTTCGTGACCTGACGCGATGTGTGTCACTGTTCTTGTTTGGAGAGGTTCACAAAGAACTCTGGAAGACAGAGCAGGGTTCTGTCATAGGGCTGCTCAATGCAAACCCCATGAAGCCCAAGGATGGTTCAGAGGAGATGTGCTTATCTATTGATCATCCTCAAAAGATCTTAATTATGGGGGAAGCTCTTGACCTGGGAACCTGTAAAGCAAAGAAAAAGAATGGAGAACCATGTACACAGATTGTGAATTTGAACGACTGTGAATACTGTCAGTATCACATCCAGGCCCAGTACAAGAGGCTTAGCGCCAGGCGAGCTGACTTGCAGTCCACCTTCTCTGGAGGCCGCATTCCAAAGAAGTTTGCTTGCAAAGGCATCAGCCTGAGAGAACGGCTGTGTCAGGATGGTTTTTACTACGGAGGCATTTCTTCAGCCTCATATGCAGCCTCAATTGCAGCTGCTGTTGCTCCTAAAAAGAAGATTCAAACCACTCTGAGTAACCTGGTGGTTAAGGGCACAGACTTGATTCTTCAGGAAACTCAACAAAAACTAGGAATACCCCAGAAGAGCTTGTCTTGTTCTGAGGAATTCAGGGAATTGATGGACTTGCCTACATCTGGAGCCAGAAACCTGAAACATCATTTAGCCAAAGCCAAGTCATCAGGGATCGTGGGGAGCCTGAAACCTGCTTTCCAGTCTATCTCAGCATCAGCCCTCTTGAAGCAACAGAAGCAGCATATGTTAGAGATGCGGAAAAAGAAGTCAGAAGAAATACAGAAACGCTTTCTGCAAAGCTCCAGTGAAATCAAGAGCCCAGCTGTGCCATCCTCTTCTCAGCAGCCCCCTTGTCGATCTCCACCAATGGGGGCTGAATTCCCCAAGATGAAAGGAACCCCAACCACGCAGATGCCCAAGCTTGGAAGAGGCATCTCAGAAGGAGATGATGTCCTCTTTTTTGATGAGTCACCACCACCAAGACCAAAACTGAATGCCTTAGCAGAAGCCAAAAAGTTAGCTGCTATAACCAAATTAAGGTCAAAAGGCCGGATTCTTACAAAAACAGACCCAAATAGCATTAAGAAGCTAAAGGAACCCCAGGATGTCCTGGAAGTGAAGGAACGTGTAGAAAAGAACAGCACATTTTCTCCTCAAGCTGAGGATGAATTGGAGCCTGCCAAGAAAAAAAGGAGAGAGCAACTTGCCTACCTGGAATCTGAGGAATTTCAGACAATTCTAAAAGCAAAATCGAGGCACACGGGGATCTTAAAAGAGGCCGAGGCTGAGCTGCAGGAACGCTATTTTGAGCCTCTGGTGAAAAAAGAACAAATGGAAGAAAAGATGAGAAACACCCGGGAAGTAAAATGTCGAGTCGTGACATGCAAGACGTGTGCCTACACCCACTTCAAGCCTCTGGAGACCTGCGTCAGTGAGCAGCATGACTACCACTGGCATGACGGTGTGAAGAGGTTTTTCAAGTGTGCCTGTGGAAACAGAACTATCTCCCTTGACAGACTCCCCCAGAAGCACTGCAGTAATTGTGGCCTCTTCAAATGGGAACGGGACGGAATGTTAAAGGAAAAGACAGGTCCAAAGATAGGAGGAGAAACCTTGTTACCAAGAGGAGAAGAACATGCCAAATTTCTGAATAGCCTTAAATAGCCCTGACTTCAAACAGGTAAAGCAGACACTTTGGATGCCGTGGGGAGAGATTTGGAAACAGCGCCGCTCACAAGAAGGATGATGGGCTCCAAAAATGAAATTCTGTATTTGTCAGTATTGAGGAAAGAAAGAACCATTTTCTAAAGAAAATAACAGGTACAAAAGGTGGAAGAAATCAGTGGGCACAGCTTGACAGTAGTTTGTGAAAAAGCTGTGGAAGTTTTGAAGATTAAAGAGAGCCAAGAATATCGCCACACAGCTGAACTCTCCAGATCAAATGGAGAAGAGACCTGCCATGTCCTACAGTCAGACCACATAGCCAATGAAATTGACTTGTGTTTTGGAGAAAAGCCAGACAGCGGTAATTGAGGCGGTGAAAACTCAAAGCATTTTCACTGAGAAAGAAAGACTAGAAATATATATACAGTGGGTTTTTGTTATTCATAGTAATTGTTTCATGAAGTTACCAACAGAGCTAGTAGATACACAGTCACTGCTCCTAGAGGAAATACAGGTTAGGTTTCTGTGAGCCTCTAGTCATGTTTTCTTCACTGGCTCAGTAAATAACTTTATATTATACATGTTTGTTTAAAGACACCTTATTTAATATATATTGTCGATTCATTAACATGGAACTCACAGTCGACAGCCCTGTGACCTCCTCACCAAATGAAGCTGATCTCAGCACATGCATTTTCTCTGGATGATCCGTGCATCCCATCCTTCTTACCCTCAGGGACAGTAGATCGCACTTCAGCGCTCCACCTGGGAGCCATTTTCAACATCAAAAGCACCTCAAAAAAGCACAACACTGTGACAAACGTGGCACGAAAAGGACATCTTTTTACACATCAGAGCTGAAAGTAGCAATAATGTTGCTTTGACCTTAGCTAGGAGCAACTCAAGTTTCTTGTTAGTCTGCACATGTGGGTGTCTGTAGTGACCACAAAAAAACACCACAGGTACTGTTTTTGGAATTAGAAGTAAAATTTAGTTATTAGGTGATTTTGGAAAAACACGGAATCCACAAATAATGAGGAACACAACGGTGTAATATTTCCCCAAACAGAGCCAGACCAGAATTGTTCTCATTTTGCAGATTAGAAAATTAAGTGATTTGAAACATAGATTGCAACTAAGTCTGTGATAATGTTGCTTGAACAGAGACTTCACTATTGGTATTTTTTTAAGTCAACTTTATTAAGGGCTAAATTTCACACAGCAAAGAGCACACATATTAAATATATCGTTTGGTAAATGTTGGCGAATTTATATACCCACATAACCACCACCAAAGGCAAGATAGAGGGCATTGCCATTACCCCAAAATGTTGCCTTTGCCACTTCCCAGTCAGGCCACATGCCCTGGTCACATCCATCACTGAGCTGTTTAGATCTGTGTTTCCTAGAGTTTCATATAAATGGAGTCAAAACAGAACATACTCTTATACTTCACATATTTTGAAATAAAGCCATGTTGTTGCCTGTGTCCATAGTTCATTTTTTATTGCTTAATATTTCATAATATGGATGTCACTTATGTCATTTATTATGTTACTATGTCATTATTCACCTATTGATAGATAATTTGGGTTGAATTGTTTCTAATTTGGGGCTGTTATGAATAAATAACAATATTCAGATACAAGTCTTTCTGTGGATATATTTTTGTTTCTCTTAGGTGTCAGTAAATAGGAATGGGATTTCTGGAAAGTGTAAGTTTACTCTGTAAGAAACCACTAAACTATTTTCCAAGTGGTACGATTTTACATGCCTGTTAATGATGCATGAGAGTTCCATTTGCTCCACATCCTCACCAGTACTTGGTATTGTCAGCCTTTTCAATTTTAGCCATTCTGATGGGTGTATCTTATTGTGGTTTTAATTTGCATTTCCTTCATGACATTTTTTCCTGTGCAGTTGGCCATTTGTATGTATCTTTTTGGTGATGTATCTATTTACTTTCTTACTAGGTCAAGTTGAAAAAATTCTGTGTTCTAGATGCAAGTGCTTTTTGCAGATATATGTGTTACCTAGTTTTAGCTTTACTATAAGGTCTTCCCTCATAGCTCAGTTGGTAAAGAATCCGCCTGCAATGCAGGATACCCCGGTTCAATTCCTGGGTTGGGAAGATCTGCTGGAGAAGGGATAGGCTACCCACTCCAGTATTCTTGGGCTTCCCTTGTGGCTCAGCTGGTAAAGAATCTGCCCGCAATGCGGGATACCTGAGTTCGATCCCTGGGTTGGGATGATCCCCTGGAGAAGCAAAAGGCTACCCATTCCAGTATTCTGGCCTGGAAAATTCCATAGACTATATAGTCCATAGGGTCGCAGAGTCGGACACAACTGAGAGACTTTCACTTTTCATTAGGTCTATGATCCATTTCAAATTAATTTCTGTTTAAGCTGTGAGTTAAAGATTATGGGTCATTGTTTTCCAAATGAACATTCAATTGCTACAGTACCATTCAGTTAAGATGCTATAATTTTCTCATATTATATTCACTTCTTTGTCAGAAAATCAGTTGACCATTAGGGTCTACTTCTGGACTTAGTTCTGTTAAGTTAATCTGCATGTTATTCCTTACGCTAGTACTATTGTCTTAGTTAGTGTAGCTATATAAGCGTAGGAATCAGGTAGTACCAGCTTGTTCTTTTTAAAATTTGTTTTGGCAATTCTAGGTCCTTTGCATTTTGATGTGAATTTGAATAAGCTTATCAATTTCTACCCCAAAAACCCTGCTGAAAATTTAAGATTGTGTATAATCTATAATTTTAAGATTTTTCATCTGTGAATATAATATGTCTCTTCATTTATCTGAATCTTTAATTTTCTCAGCAGTGTTTACTGGTTTCAGTATACATATCTATTTTTAAATAGTTTTATGGTGTCATAAATGGCGTTTTTTTCCATTTTAAATTCCAGTTATTTTGCATACATGCTAGTATACAGAAATAAAATGCATATTTGTCTA EMBV3_34407 GATCTGAATGACACAGATAACCATGATGGTGTGATCATCCACCTAGAGCCAACATCGTGG Gene BVT0101_055356 + 0 NULL GK000002.2:83412761-84413661 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105600 1 XLOC_062612 NonCoding TCONS_00105600 XLOC_062612 NonCoding NonCoding - 2:83515782-83554919 - TSS77886 627 1 TCONS_00105600_1 34 0.69377990430622 2 0.984030049059689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000673977722312421 0 4.0017397322852e-05 0 0 0 0.000414232598957154 0 2.67378629559785e-05 0 0 0 0 2.32277581606794e-05 0 NM_174654.2 SLCO1A2 Bos taurus solute carrier organic anion transporter family, member 1A2 (SLCO1A2), mRNA. 1e-129 466 84.80 0.668261562998405 0 noncoding 0 0 0 0 -0.298221844015509 0.150744150260182 -0.00549247246380945 0.930369621022224 TGAGATTAAAGCAAACTCTAGAAGGATTGAGAGTACAAGATGATCTAAAACTTCTGTCTAATAAATGAAAAAGGTGTATTTAATTCAGCTATTTCATGCAAAGATGGGTACAATAAAGGACAGAAACAGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTAGCAAAAATATACAGAAGAACCATACAAAGAAGATCTGAATGACACAGATAACCATGATGGTGTGATCATCCACCTAGAGCCAACATCGTGGAGTATGAAGTCAAGTGGGCCTTAAGAAGCATCACTACAAACAGAGTTAGTTGAGGTGATAGAATTCCAGTTGAGCTATTTCAAATCCTAAAAGATGGTGCTGTCAAAGTGCTGCACTTGATATGCCAGTAAACATGCAAAACTCAGCAGTAGTCCAGGACTGGAAAAGGTCAGTTTTGATTCCAATATCAAAGAAAGGCAATGCTAAATAATGTTCAAACTACCACACAATTGTACTCATTTTACATGCTAGCAAAGTAATGCTCAAAAGAAAGGCAATGCTAAATAATGTTCAAACTACCACACAATTGTACTCATTTTACATGCTAGCAAAGTAATGCTCAAAATTCTTTAAGCTAGGCTTCAGTG TCONS_00102766 r 5' 1186342 TCONS_00102766 r 5' 1147759 EMBV3_33889 CGCTGGAGGCGGCTGTGGCGGCCGCGACTGGCTCTCGAACGGTTTGGCCTGATGAAACTA Variant GeneID:521533|MMADHC:NM_001034541:94_cdna 53^257 3 EMBV3_21380 GeneID:521533 2 GENE MMADHC C2H2ORF25 MGC127500 methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria EMBV3_20461 CTCCCGAGTGTTTGTATCTTTGTTTCTCAGGGTCGTCGTGAGGTTCAAGTGAGAGTGTAT Gene BVV0102_454543 - 1 EMBV3_34097 GK000005.2:56677996-56683092 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191947 1 XLOC_117064 NonCoding TCONS_00191947 XLOC_117064 NonCoding NonCoding - 5:56680146-56680778 - TSS143748 632 2 TCONS_00191947_2 46 0.134493670886076 1 0 0.000376683974739435 3.64131558320148e-12 0.000328642132179035 0.000637662337380169 0.000168594691938251 0.000447916443360817 0.000205845966715382 0.000211115063291071 0.000105122854021805 2.31666077676237e-05 5.63344504460188e-06 1.19814670122259e-27 7.66678229453076e-06 1.57948957479505e-19 0.000458865106630239 0.000668644577673525 0 0 0.000845164633673041 3.91863861685555e-05 8.20322997365979e-06 1.26496095963109e-17 0.00095365232789405 0 0.000129348573319316 0.000839891970994235 0.00122020642555951 2.37244897508524e-20 4.2082833075844e-05 0.000416263798353104 XR_225903.1 LOC101902542 PREDICTED: Bos taurus uncharacterized LOC101902542 (LOC101902542), 8e-133 477 100.00 0.416139240506329 NR_045171.1 1700012D01Rik Mus musculus RIKEN cDNA 1700012D01 gene (1700012D01Rik), non-coding 3e-11 73.4 65.76 0.47626582278481 0 noncoding CTGGGCGCTCGGCCTTGGGTCCCGGCCCAGGAAAGGGAACGCGGAAGGGACCTGGTCCTGGGGCCGGTACTAGGCCAGAGAGGGAAGAGGGGAGAAAAACCCCGCACACTGGGCCAGCCCATACCCCTCGGGGTCAGAAGAAATCTGTTTGGGTGCGAACGTGTGTTTGAGAGTGAAACTCCCGAGTGTTTGTATCTTTGTTTCTCAGGGTTGTCGTGAGGTTCAAGTGAGAGTGTATATGAAAACTGTAAATTGTGAAATGCTCAGAAGCAAATTTAAGACGTTATTCCCAGTTTGTACTTCTGTACCCCGAGGTTGTGTATCTATACGTTTCTTTACATCTACTTGTGTGTCTGTGTCTCTAGGTTTGTGAGCCCCTCTGCGTGGATTTAAAAATATGTACATTTTAAAAACCATTGACTTGTCAAGCCCCGCCAGAGGCCCAGACTCCCCCGCAGCCGGAGCTGCTGAGATGTCTGTTCTTCGCTTCCCTCCCACTCCTACCACCTCCAACTCCCCTCCTCCTCCCTTCCGTTGAGAACAAGGAATTTCCAGCCCTTAGCAAATGGAGAGAGAAAGAGACCAAGATTAAGAGAAACTACGGAAAAACAACAAAGACAAGAGACAGGTGA TCONS_00195101 TCONS_00195102 r 5' 2152 TCONS_00195101 TCONS_00195102 r 5' 2152 EMBV3_27984 CAATTGGGCTCTCAGTCCGTCCTCCTGGAAAAGCGTGAGGAGAAATCGATCTGTGACTCT Gene GeneID:519656|NEUROD4:XM_002687623:757_cdna Constitutive 0 NULL GeneID:519656 5 GENE NEUROD4 NULL neurogenic differentiation 4 EMBV3_32468 GGCATTTTAGAGGTGGCCAATGGAGGACTGATGTGCACTCTTCTGTTTCTGCTCTTGCTC Gene GeneID:615605|LOC615605:XM_002693602:98_cdna Constitutive 0 NULL GeneID:615605 15 GENE LOC615605 NULL similar to olfactory receptor MOR231-1 EMBV3_32205 TCTTTACTGCTGGATTGTGTTCCTTCACAGCCATGCTGGCCCTCCTGACACATCAGTTCC Gene GeneID:280933|ST7:NM_173961:12_cdna Constitutive 0 NULL GeneID:280933 4 GENE ST7 NULL suppression of tumorigenicity 7 EMBV3_43707 CAAGGAGGACGACTTCGCCATCCGCGTGCTCACCGAGGACTTCACGCTGCCCTTCCCGTT Gene GeneID:100299970|LOC100299970:XM_002692782:51_cdna Constitutive 0 NULL GeneID:100299970 14 GENE LOC100299970 NULL hypothetical protein LOC100299970 EMBV3_08632 GGCCCATGCTGCAGGGCGAGCTGCGCGTTGCTCTCAGGCCATTGCTGAGCAATAGAGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01753 GTTGGTTTAATTATTAATATGTACTAAGAATGTCCTTATTCTTGTGGTTAAAAACCTGCC Gene GeneID:526059|ABCD3:NM_001105396:159_cdna Constitutive 2 NULL GeneID:526059 3 GENE ABCD3 NULL ATP-binding cassette, sub-family D (ALD), member 3 EMBV3_43142 CCTTCCATCGCAACTCCCTGAGAACCAAAGATGCCTGGAGGAGCTGTGCTGCCGGAAAAA Gene GeneID:286814|P2RX7:XM_002694491:356_cdna Constitutive 0 NULL GeneID:286814 17 GENE P2RX7 NULL purinergic receptor P2X, ligand-gated ion channel, 7 EMBV3_35970 TGCCTTACGTTCTAAGATGTAGACGTGGGTGGATGTCAGTCTCTGAACACGCGCAGACAT Gene BVT0102_097629 + 0 NULL GK000025.2:2097206-2102772 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144248 TCONS_00144245 TCONS_00144246 TCONS_00144250 TCONS_00144247 TCONS_00144243 TCONS_00144244 TCONS_00144249 1 XLOC_088502 Coding TCONS_00144243 XLOC_088502 Coding Coding PDPK1 25:2057678-2102597 j TSS108348 6808 1 TCONS_00144243_3 227 0.049647473560517 10 0.848657553764638 0.00703382870000931 0.00469374341846065 0.00364277640557826 0.00334330598034888 0.00391165922812644 0.00261748282523166 0.0017376534016851 0.000848145927838997 0.000959833573350935 0.000185889601993083 0.00106640878413544 0.000383729443069327 0.000259375975178144 0.000228542388587721 0.000890031515022142 0.00517690232383967 0.00164660761701074 0.0043831715323646 0.00354050017820484 0.00236873515624549 0.00305568630276849 0.00252929942951397 0.000475033637380702 0.000330784288558281 0.00653922129272531 0.00435451358460031 0.00181641846209751 0.000891189473500362 0.000612715325244707 0.00165041823785582 XM_002697862.2 PDPK1 PREDICTED: Bos taurus 3-phosphoinositide dependent protein kinase-1 (PDPK1), mRNA. 0.0 1.126e+04 100.00 0.916568742655699 NM_002613.4 PDPK1 Homo sapiens 3-phosphoinositide dependent protein kinase-1 (PDPK1), 0.0 1548 76.16 0.324471210340776 TCONS_00144243_3 sp|O15530|PDPK1_HUMAN PDPK1_HUMAN 3-phosphoinositide-dependent protein kinase 1; 2e-155 447 95.59 0.995594713656388 1 coding 0 0 0 0 0.0590141360984167 0.589720992567064 -0.0164818565722698 0.820607383658573 ATGCGTGCGGACGCCCGGGGCCTGCTGCCTGCGCCGCCTCCAGCGCCACCTCGGGGATGGCCTCTGCTCTCTGTGCTGTCCCTCGCCTGGGCTGAGACCCGTAGCCTTGCTTGGCGGGAGCGGGTCGCTCAGTATGACACGGTTCCCATTCAGTCCAGCGTGGTGTTATGCTCCTGCCCATCCCCATCAATGGTGAGGACCCAGACTGAGTCCAGCACGGCCCCCGGCGTTCCCAGCGGGGGGAGCAGGCAGGGCCCCGCCATGGACGGCACCGCGGCCCAGCCCCGGGCGAGCGCCAGCGCTCTGCAGCACGCCGCGCAGCCCCCGCAGCCTCGGAAGAAACGGCCCGAGGACTTCAAATTCGGGAAGATTCTCGGTGAAGGCTCGTTTTCAACATTCAGACCTTTGGGCACTTGGATGCATCATATACCAGCTTGTGGCAGGACTGCCTCCGTTCCGAGCTGGAAATGAGTATCTTATATTTCAGAAGATCATTAAGTTGGAGTATGACTTTCCTGAAAAATTCTTTCCTAAGGCGAGAGATCTTGTGGAAAAACTTCTGGTTTTAGATGCCACAAAGCGATTAGGCTGTGAAGAAATGGAGGGGTATGGCCCTCTGAAAGCCCACCCGTTCTTTGAGTCCATCTCGTGGGAGGACCTGCATCACCAGACGCCCCCAAAGCTCACGGCTTACTTGCCGGCCATGTCGGAAGACGACGAGGACTGCTATGGCAACTACGACAATCTCCTGAGCCAGTTCGGCTGCATGCAGGTGTCCGCGTCCTCCTCCTCGCACTCCCTGTCGGCCGTGGACACGGGTCTGCCCCAGCGGGTGGGCAGCAACATCGAGCAGTACATCCACGACCTGGACACGAACTCCTTTGAACTGGACTTACAGTTTTCTGAAGACGAGAAGAGGTTGTTGTTGGAGAAGCAGGCAAGCGGAAACCCTTGGCACCAGTTTGTAGAAAATAATTTAATACTAAAAATGGGTCCAGTAGACAAGCGGAAGGGTTTATTTGCACGGCGACGACAGCTGCTGCTCACGGAAGGGCCACACTTGTATTACGTGGATCCTGTCAACAAAGTCTTGAAAGGTGAAATTCCATGGTCACAAGAACTCCGACCAGAGGCCAAGAATTTTAAAACCTTCTTTGTGCACACGCCAAACAGGACATATTACCTGATGGACCCCAGCGGGAACGCGCATAAGTGGTGCCGAAAGATCCAGGAGGTGTGGCGGCACAGGTACCAGAGCCACCCGGATGCTGCCGTGCAGTGACGCTGCAGCCCGCCCTCACCGCGGGGCCATGCCCCGCACAGCCTGCTGCCTCCGGACGCTTCCAGACCACCTGCCGGCCATCTCAAGGGGGACGCAGACGGCGGAACCTTGCAGCTTTTTTATTTAAAAGAAAAGAAGAAAAAAAACATCCAACCACACAAAGAACAAAACCAATAACGAAAAGGAATTCAGGGTCGCTTTGCTTGCTCTCTGTGCTGTGTGGAGCTCTCCACGCTCTGCTCGCCGTGGGGACTAGTGCCGTGCACATCTGCCTGGCTCCCGCCCCGACTCGGGGACAGACTCGCGGCGCCAGCTCTCCACCGCAGGCCCGTCACGCCCATCCTGCTGTGGCCCCTGGGCCAAGGCGTGTCTTTGGGCTCTCCCTGCCCCTGGATCATCGGGGAACCAGCTCTTCCCCAGGGAGCCAGGCGGGCCCCTGCTGGGGGAGCTCCAGCTCTGCAGGCGGGGGGTTCTTGGCTTTTGTCCGTTTGCCCCTTTCTTCTCGTCCCCAGTGTCTGGCCCGATCCCCACGACCGTGCTTGGCTCCTCCAGTAGTCGTGGCTGTGAGATTCCTGCGGTCCTTGCTGTCTGTCTGCAAGCACTCCTGCGTCGTGTCGACTGGGCAGGCTCCGGGCGGTGAGAAGTAGAACAGGTTGTCCAGGCGAAACACGGAGCCGCTGCTGTTGGAGGGCGCCTGCCGAGCGCTCCAGTGTGTCACTCCACGGAGCAGCGTTGTCCCAGGGCTGGGGACCGAGCACTGACCCGGGGGAGCCCCAGGAGCCGGGGCTCTGTGGTCCCCTCCCCTGTGAGGCCAGGGCAGCGGGGCAGACAGACCTGGTGGCCTCCTCTCGGAGGAGCAAGAGCCGGCAGCCCTTCTGAGAGTTTGGTTGGAAGATGGAGTGTGTCTGGGTGAAGTCGGGGCTGCGAGGTGCCTGGCATTGGCACATGGGCCGGTCCTCCATCACACCAAGGCCGCCCCGTGCACTCTTTTCCTGCTAAAGTTGCCCCTTCTCCAAGTCTAGCTCAGAGCGTTTTTACGTGTCCACCGGGAACATCAAAAAGCCCTCACGTCGTCGGGTCACCTGGTCCCCGTCATGTGGGCTTCGCCTGGAAAACAGTGGTGCCACTCCCCTTGCACAGGGGCAGGAGCAGCACACGTGAACCCGGCCCACCCCTCTCCAGTGTCAGGCTATTTCCTCTTGCTCTGTAGGGGTGTGCCCTGCCCAGGGTGTCCCGGGGGGCAGCCTTCAGTCCCAGTGGAGGAGGAGCAGGCGCTGTGGCCCTGTCCCCAGGGGAGGGGTGACTGCCATTTCCTCTGGACTTTCACAAAGGCACCGATTTAAACTCCCACGGCAAAGGTCCCCTGACGACTTCTGTGCCCCCACCTCTTGTCCCACCCATCACCGTGTGTGACCCACGGTCCACACGGAGGGAAGGATGTCTTAATCTCTATTGGTGATGTCACAACAGCAGCTGTTAAACTCGGAAGGAGGTTGGGCTATGGGGAATCCCACTGTGCAGGGGCCGGCGGGGGCGCTGGAGGGGCTCAGAGATGCAGCCAGGTTTACCAGTGGGTGTGTGTGTGTGTGTAGGATACCAAGGCGCAGGGGGTGCCTGCCCAGGGTGGGGGGCGGCCCAGAAATAAGGCACTGCCCTGGGTATGGAGCCCCGTCTCCTTGCTTTGGAAAAAGCTTGCCTGTGTTCACCTGCTTTCCCAAAAGCAAATCTGTCTTGAGCCTTTCTTTCAGGATCAGGACTTGGGTTTCAGGTGTACACCCTGTTCAAATGTCCCTCGCCACAGCGCCCACGTCTGTGTGTGCAGTTGGAGGGCAGGGAGCCGCGTCCACGCCGCGTCTGTCCTGGATGTCTGGGTGCGGGGGTGATAGGCAGAGCTGAGTCCTGGCTGTAAAAGCGCACTCGGCTTGGCCGCTCGGGGAGCGACAACGCTCCCACTGCATTCTTCCCTCTGGAGAGCGCCACTACCTCCTGGGCTCAACCGACAAGCTCCATCTTAACCTCCAGAGCCGGAGACCCAGGGCTTCGGGGTTGAGCTCGCAGCTGGCAGAGCTGAAGTGACTGCCCTGGCCTGAGCCGGTGACAGCTGAGCCCTTCTTTGTCGGCCACCTTTCTCTGCTCACTCACAAGCCTCTTCCCTTGTTTTTCTTTTAAAGGCCCTTAGATATTCTCTTCTTGCCCTGTGCTTCCTCGTGTAGTCTTTAGTTTTATCCACCTCATCCTTTGAGCCATCATCCTGGCAGGCAGGTGCCTTACGTTCTAAGATGTAGACGTGGGTGGATGTCAGTCTCTGAACACGCGCAGACATACCTGGAAACATATATATAAACGTGGGCTGATCCAGGGTGAGAAAGAGAATGCCCTAGTGTTGAACAGCTCAGGAGCCCGAAGTTGTACCGAGAGGGGCAGGGGGGGAGGTGCCGGAGCTGAAGCCAGTGCCTTTCGGACAGCACCGCTCCCCCACCGCCCGGCCCCTCTTGCCACGGAGTGGGGGCCGGAGGGCCGAGGGCTCTGCCGCCTGGCAACACCTAGCCTCCCTCCAGGGGCGTGAGGAAGCCAGGTGTGACATGACCAAGGCAGTGGGCAGCCCCACGTGGAACCCAAAGCCCCACCCCAAGAGGGGCACCACAGGCCTGCCATTCTGAACCTTGCATCTCAGGAGGCTGGTTACAGACTTGCCTTGGGAAAGGTGACTCTTGGGGTCAGGCCAGGGCTGAGGGGAACTGCACCTACCCCAGCGCCCTTGGGGGCCAGTCTGTGGCATTGGTGGTGCAGGCCTGAAGGAATTGCAGGAGACCAACCACCTGCCAACAGACCCCTGAGGACAGGGTGCGCGCGTGGGGCTCCGGGTGACTTTGTACTTTGTGAAAACATTTGTGTTCTGAAAAAAGTCAGCGGGAGGCTCAGCACCCAGGAAAGCCCGCTGCGCGCGTCTGTGTACAGGCCCAGCCTGCCGCCCGCCGCCCCACCTGCACACGTGTGTTCGCTCTTGTAACTGACCTGGGAACATGACAACGCAAACCATTTTGCATCCAGCTTTTCCCACTTAGTGTTTTTTCTTAATGTTGTGTCATGTTTGAACGGTGATTTAAAAACCTTATTTTTAATGATTGTAGAGTTTAATGGATAATTTTTATCATAATTTATCTGACCATTTCACTGCTATAAAACATTTAGGTGGCTTCTGGTTTTTCACCATTTAAATAATGCTGTGATTAATATCCTCATAAATCTTTGATTTTGGACTCTGAATCTCCCTCGCCCCCACCCTGCCCAGATACCTAGAAGTGGTGTTTTGGGGGCAAAAAGTCTGTTCATTTTAAAGGTGGTACAGTGTCTCTTCTCTGTCTTGATCTGATGAGTAGATACCAGAGTTCCAGTACAGAACTTCCTTAGTTGTGCTCTGCAGATTCTGAACAAACCAATTTCTGGTAAGCTGTGTGTTCCCAAGAATGTTTGAGTAAGATTGCTCTTTCCCCCCCCCCCTCTTAATCCTAAAGTGATGTCATTACTGCAGGCCATTTGTGACATATTTTTCCAAAAGCCAGTTTCCTTATTTTCATGGAGAAAACCTGGTTATGCTTGCATGTTACCTTCCCTCCCCTGCTGCTATGGCTTTCAAGTGCTTGGTGACACTTCCAGAATCTTGTACTTTGTGTCCACAATGGTACTGAATTTGCATCTGCACAGTCAGCAGAGATAAAAAGTGTTGAACTGACCTTGCCACATACTTAGTGGATAATTTGTAATGAAGTTTGTAGACTCAGAAAGTACACTGGGCCATTTGGAATCAGCAAAAGAGCAAAGGCTCTACTTGAAACCATGTAGACAATTGGATTTTAGGGAAGTGTGCTTGCCCTCATGCTCTTCAGATCCCAGGACTTAGGTCCTAGCAGTTCATTAGAGCACGCTGGCCAGGTTTTTCCATTGTAGAATGTGATTGTCCTGGCTGACAAGGATTTAAGAATTTCTCCCCTCTCCTTGCCCACCAGTGTTGCAGGTTGCCTAGTTGTCTTTTAAGTCCAGACAACCCAAATTTGGCTTCCTCCTTAATTTCTGCACTTTAGTTTGGGGTCTGTCACTTCTGAGGTGGAACACGCATGGGAGACTTCTGGGTGCCATGCCCAGTGCCACTTGGCGTGGTCAGAGTCTGTGGCCAGATTATGCAGAATTAGCTCTCCCTTCCCTCTGATCACCTCCCCCTGGTTGGTCCATAGACCAGAGCAGAGGCTGAGCAGCTGTGAGCATGGTGAAGGTACTCTCCTCGGAGATAGCACCATATGCGTTTCCCCGTGTTTTCTTTCATATCCAAACCTAGCATGAACTAACTGATGGTGACTCGAGTGGGTGTGGCCCTTGCTTCTTAGGCAGACTACATGGCAAGTGCCTTAACTCAGGGCAGGAGTCACTCCCAGAGCCTCTGAGGGGTGCAGGCTGCTGGCCCAAGACTGCAGGGTTGTGAAGTAGGCTGCCTGTGGAGATCTGGCCTGGGGAGGAAGCTGTTCAGCAGAGGGCAGTTTTATCTGAGCTCAGACAGCATGGTGGGCAAGCCTCCAAGGATACCTGAATTTCCCCCAGACCCATTTCTTCACTATGAAGAAATACCAAACTATGTACAGAGAACTTTTTACAAAAGGCAAACTTTTTTAGCTGTGTAATCCACCCTAGTCTAACCCATCTGGCTGAATGACTATGAATAGGGGTTCATTTTGCTGATGAAAAGCCTCTACCGTGATGTTTGATTGGACATGGACAAAATCAAATTTTTGCAATATTTAGAGCTGCTGTAGCTGTTCCTTAACAACACAAAATAGGATGAATCAGTAGTATGTTAGCTGTCTTTCAGGTTGGTGGCAGTCGGTTATAACATGTGTAATATTCTCTACCTGGTCTGTAGCTGTAACTGTGATGTACAGGCAAAGCAAACATTAAAAAAAGAACTTATGAAAACAAATAATGCAATGATATTAGGATATACACTTTTGTATTTTTATTCTTATATAAGGTTATTTGCGGCTATTGTTGGCCTCTAGTTCAGTCTGTGTTATTTAAAATCTAATATATGAATTATTTGGATTGAATTCATGTTCGGGGCCACGTTGTTGTATGTATGGATGTACAGCCTTGAATGTGAATAATTATTGTAAACTATATTTTACAACTTTTTTTTCTGGCTTTATTATATAAATTTTCTATTTGGTCGATGATTTAATCATATCATAATTTAATGAATCTGTTTATTCTTTTTTTTCCCCAAATATTTGTGCTTTAGATGTAGTTACCAGATGAATTTTCCACGTATGCTCGGTAGTCTTGTAATAAAAAAGCATGTAGAGTGTAGACTCTCGCTGACGTAGCTCTTCCTTTGGCCGGGGTGCGGGTCGGGCGTGGTCGGGCGACCAGGACCTGGGCCCGAGAACAGGGCGTCCAGGCATGGCACGCGCCCGGCGGAGGCTTGCGAACCCCTTTCGAGCCCGACACCCGGCTCCACCGCGGCTCGCCCACGTCGGC EMBV3_05821 AACAACACCCTTATGTCTGATGAGCAGGGGGAGGGTCTGTGGTGAACATAGGAGCTTCAG Gene BVT0102_018191 - 1 EMBV3_03175 GK000017.2:44665572-44965479 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077099 TCONS_00077100 TCONS_00077101 1 XLOC_046983 Coding TCONS_00077099 XLOC_046983 Coding Coding ZNF605 17:44963637-44991146 = TSS57722 5516 1 TCONS_00077099_5 674 0.348078317621465 5 0.799658281227279 0.000677636489116705 5.15774366072241e-07 0.000148668117543514 0.00020399087070435 5.0584158695743e-05 0.000208164661909314 0.000193114768144376 0.000457243353712283 5.96731807843511e-05 2.13778774135169e-07 2.45666727387997e-08 1.70472160122835e-07 2.11731008651291e-05 2.42333188248076e-07 1.12649886400771e-06 0.000615146235228808 1.4562055157935e-07 0.000218340162983924 0.000260669767789275 3.78258052399828e-05 1.55645980190903e-07 3.6255221846395e-05 0.000210592700965431 7.18315433196848e-05 0.000530273303009397 0.000170282534668936 0.000250579388536201 8.27124310575066e-06 2.52068931518891e-07 0.000162885119896452 XM_002694442.3 ZNF605 PREDICTED: Bos taurus zinc finger protein 605 (ZNF605), transcript 0.0 9948 100.00 0.999818709209572 NM_001164715.1 ZNF605 Homo sapiens zinc finger protein 605 (ZNF605), transcript variant 0.0 2888 76.95 0.707396664249456 TCONS_00077099_5 sp|Q86T29|ZN605_HUMAN ZN605_HUMAN Zinc finger protein 605; 0.0 1139 81.90 0.998516320474777 5 coding 0 0 0 0 -0.0143843222351816 0.895305855864041 0.0018310405863369 0.989164242313396 CCCCGCCCCTGTGGCGTCCTTGGCTCTGATCTGGTGTCTGGCTGATGTCAGTGACCTGGCTCATGAGTGGTGGAGAAATTGAAAGTGCCATGGGTCTCAGGATCAAGACTTGTGTGAGATAAGAAAGAAGAGGCCTCAGGACTTGGGGTGCATTCCTATCTTTGACCAGAGGTTCAGAGTATCAGGACAGAGAGAAGTCACAGAGAGAGCAGATTTTCCAGAACTGGGGAAGATGATGAAGTCACAGATATCGTTTGAAGATGTGGCTGTGAATTTCACATTGGAGGAGTGGCAGCTGCTTAATCCTACTCAGAAGACCTTGTACAGAGACGTGATGTTGGAGAACTATAGCAATCTAGTTTTATTGGGTTATCAAGTTATCAAACCTGAGATGATCTTCAAGCTGGAGCAAGAAAACCCATGGTTATTAGATGAAGAAATCCTAAGTCAAAACTTCTCAGAAAAAGTCTGGCTAGATAATAATCTCAAAATGTGGCATCAGGATAATCAAGACAAGCTTAAAAGTTTGGAGAGAGGCCATGAATATGACATCTTTGAGAGAATGTTTCATTTAGGCATTAACTTTGATCATTTAGGAATGAGATCCCATAAATGTGGCACAGGTGAAAAAAGTCTGAAGGATCCTTTTGATTTTCTTATTCCAAAAAGTAACTGTGAAAGAAAGAAACTTGATGAGCTTAATAGGAAATTATTATTTTGTATTAAACCTGCCAGAACTTATGGTGGAATAAAATACTCTGATGGCAATACATGTAGAAAAGTCAGCAGTAAAGAGCCAGGACTCATTATGAGCCATATACCACACACAGGAGTCTGTTTGTGCATGGAATGTGGCAAGGTTTTTAATAAAAAGTCACAGCTCATTATACATCAAAGAACTCATACAGGAGAGAAGCCCTATGGATGCCGGGACTGTGGGAAAGCTTTCTCCCAGAAGTCATTGCTCACTATTCATCAAAGGACTCATTCAGGAGAAAAACCATATGGGTGTGGGGAATGTCAGAAAGCTTTCAGTAGGAAATCACTGCTCATTTTACATCAGAGAACTCACACAGGAGAGAAGCCCTATGGCTGCAGTGACTGTGGGAAAGCCTTCAGCAGGAAGTCACAGCTTAAAAGACATCAGATAACCCATACAATAGAGAAGCCCTATGGCTGCAGTGACTGTGGGAAAGTCTTCTCCCAGAAATTAAAGCTCATTACACATCAGAGGACACACACAGGCGAGAAGCCCTACAGATGTAGTGATTGTGGAAAAGCCTTCTTTTGGAAGTCACAGCTTATAACTCATCAGAGGGTTCATACAGGGAAGAAGCCGTATGCCTGTAGTGAATGTAAAAAAGCCTTCAGCAGGAACTCACTCCTCATTAGGCATCAGAGGATCCATACAGGAGAGAAACCCTATGAATGCAGTGAATGTGGTGAAGCCTTCATCAGAAAACCACAACTTGTTAAACATCAAATGACTCATACGGGAGAGAAGAACTATCAGTGCAGTAATTGTGAGGAAGCCTTCTTTAAGAAGTCAGAACTAATTAAACATCAAAAGGTTCATTTAGGAGAAAGACCCTATGGATGTGTTGAATGTGGAAAAACCTTCTTTGGAAAGTCACAGCTCCTGACACATCAAAGAACTCACACTGGAGAGAAACCTTATGAATGTAGTGCCTGTGGGAAAGCCTTCACCCAGAAGTCCAGCCTGGTGTCCCATCAGAGGACACATACAGGGGAGAAACCTTATGAATGCAGTGAATGTGGGAAAACCTTCAGTGAGAAGTCAAGTCTCATTCACCATCAGAGAACCCATACTGGAGAAAAACCCTTCGAATGTGGTGAGTGTAGGAAAGCTTTTGCCTGGAAGCCACAGCTTCTTAGGCACCAGAGAATTCATACAGGGGAGAAACCCTATGGATGCAGTGAATGTGGAAAGGCATTTGTTCAGAAAGTACAGCTCATTAAACATCAGAGAAATCATACAGGAGAGAAGACCTATGGATGCAATGACTGTGCAAAAGCTTTCTTTGAGAAGGCACAGCTCATTATACATCAGAGAATTCATACAGGAGAGAGACCCTATAAATGTGAGGAATGTGGGAAGTCTTTCACTAGGAAGTCACACCTTATGAGGCATCAGAGGATCCATACAGGGGATAAGTACTATGGATGCAGTGAATGTGGGACTGTCTTCCACAGGAAGGCGCAGCTCCTGATTCATCAGAGAAGTCATATGCTGTAGACATGGGGTGAATGTGGTGAGTGTGGGGAGTCTGCCATCAGATGTCAGGTCCCTGACATTCCAAGGACATGTATGGGAGAGAAACTCTGTCACTGCAGTGACTGTCTTACCACATAGAATTTAGAAAGAGAACCTTTTTTTGTTGTTGTTGTTAAGTAGACGATATAGGAAAGTCTTCTCCCAGGAAACACAACTTGTGGCATATTGATGGCTCCTCAGTGTGGAAGTCTTATCAGTATTGTGTTAAGTATAGACCTTTCAGTCAAAAGTGCCAGGCTATTAAATTTTAGAAGACCTAAACAGGAGAAAAAATCAATTGTTGTAACAAGTGAGTGAAAATTTCATTGGGAAATTGTAGCCCAGAGTACACTAGATAATACATACACAAAGGAAGTAACTGAGTATTATATACTATAGGTCTCATGCAGAGGAGTAGTCTTAGTACATTGAAGAATTTGATAAGCATGATCCCTGTTGAAATAATTCTTTAAGAAGGTTATGTTTATTGTATATAAATTTTTGTAAGAGAATAGGCATTTTTAAAGTGGTAGCTGTGTTTGAGGTGTGAAGACTTCTTTCTGCTTTCTGTTAGGGTGGTATAATAAGAACCACATAAACTCTCCTGCTTTAAACAGCTAGAAACTCCATTTATGAAATAGTGGTTTTTAGACATATGTCAAGTGCAGGTTTATGATCCCTGGCAGGAGGTGGACAAAATAAGGACAGCCCCACGACTGCCCAGCCTACTACCTGGGGGCCACTGTCAAGGCTGCAGGTCAGGGAGTTGAATGAACATGGTCTTGCTGAACTGAAGAGGGTTTCTGAGTTGGCATTTGAGGAACCTCGGTAGCTAGAATTTGCAGGTGAAGGGTGCTGGGTAAGAAGGAGCTCCCCAGAGAGGAGGCTGTATAAATCCTCAGTGAGTCCCTCTTTGAGTATTTGGCTTTAGTCCTTATTTGCATGTGTGTGGAAGAAAACTGAGACTCTGAGAGGAGCTGGGTAGCAGGGAGCTGAACAAGCCCTGGAGCTTAGCACAGGCTGAGACAGTTTGTGTTCCCACCAGCCACTTGGAGGCAGCTTTTTGCACAGGGGCATCAAGGGGAGTTTCCAGAACAGAGTTGTCTTGGGGACAGTGGAGAATCACTTAACCTAGATTAAAAGGTACTCTGGACCCACAGTGTTTGACATCCAGAAACTTACCTGGCACACCAAGAGGCAGGAACATATGACTTGTAACTACAAGAAAAATCAGTCAATAGAAAGAGGAAAGACTGAATTGATGGGAAGTAGTAGACAAGTATATTCAAATAGCTACTGTAAGTATAAAGTAGAAGAAAACATAAATTTGATGAAACCTGGAGTGTAAGATACACTTTTAAAAGCTCAAATGGAACTTCTCAGGTTGAGAACAACTCTGAAAAATAAAAAATAAAAAAACCCAACTGGAATTAAGAACATATTAGACATAGAAGAAGGAAAGAAATCAATGAATCTGAAGAGTAAGAATGAAAATTATCAAATGATATACCCAGAGAAAAACACTGTGGGTGGGGGGAAAGGAGGACAGGAAATTAGTTAAAAGTGGTGTAATATACATGTAATGGAAGGTCTAGAGGAGAGAGGTGAGAGGCGGCAGAAAAGGGATTTGAATAAATGATGGCTGAAAAATACCCATATATGATGAAAAGTATAAACGCACATATTCAAGAAGTTCAAAGAACCCAACACAGAAGAAACATAAAGATGCCAACGGACATCACAGTCAGTTGATGAAAACTGGAGTTAAAGAGAACAATTGTTGGGAATTCCCTGGTGGCCAAGTGGCTGGGAGTCTGCCTTCCAATTCAAGGAGTGAAGGTTCAGTCCCTTGTGGGAAACAGATCCCCCATGACGTGTGGCCCAGTCAAAAAAAAATTTTTTTTAATTGAGCAATTGTAAAATGCCTGGAGAAAAAAGGACAGGACACACCCACAGAGCAAAAAATTACAATATACTTCTGGTCAGAAACTATGCAAACTATAGGACAACAGAATGACGCTGTTAAGTTACAAAAGAAAATAAAGAACCTCCCCTGCCCCACAGCCTGGAGTTCAATTGCCTGTCAAAAACGAAACCAAAAAGGACTTCAAAAAAGCAAAATCAGAGAGAGTTCCTGCCTTCAGGAAACATTGAAGTTTGGGGACTGCAGGAAAACACCACTCTGGAAATGAAAGGTTCTGGAAATGGTGAATGCATGGGTGAATATGAAAGATTTTTGTCTTTATTTTAAAATTCCTTAAAAAGGTAATGAACTGCTTTAAACCAAACTAATGACAGCATACCTTGGGTTAAGATCTACTTAGAAGTAAAGTGCTACAGTAGTACTTAAGTATGAATCTATAAAAATAGTTGAAGAGACTTGTGTTGTCTGAGTCAGAGATGTGGGATGACTTGTATCTTTAGCAGCTATATGATGAAAAGTGTCTGTGTTATGGATCTGTACATGTGCTCATGTTCTCTGAGTGTTCTCCATGTCCACACCATTTTCCTCCTTTCTTTGTACGCCCAGAGGGAGTGCACTGCTTCCTAGGATTTCTGCTTAGGTTTGGAGAGGCGAGGTGTGTGTCACCCCTGCTTCTCTCCTGCTGGCACACATCTGGGGGTGTCTGTCCATGTGGCTGAAGCTCCTATGTTCACCACAGACCCTCCCCCTGCTCATCAGACATAAGGGTGTTGTTAATTGCTTCTGGGGACTTCACCATCCCTGGTTGATTTTCTTAATTCTAGACACACTTCTGTAAATAGTTTGTTTATTAAATATTCTTGAGTTAATCATTTTAAGTATAACGTTTGTTACAAATGATGAACGTTTGACCAAATTTTGAGTATCAGTTACTGGTCCATGGGGCATAGGCTGACATCTTTTGAGATTTCTCACACTCAAGATCAGTATTTTCTCTTTGTGTTTTAATAATTCAGTAAAAAATTATAAATTCTTTGTGTGTTTTGTTTTGCTGCAAACATAAATGACTCTGGAGATTGTTACCATCTGCTCCATATGCCGGTGGTCTCACAGCAATAGACTGAACATCATGAGGTCTTTGTGCTACCTCTGGGTTGGTTGACCTTACAAGAAAGCATTATTATTTTTGTTAAATATGTATGGGCAAGAAAAAGGTAACTCATTACTGAGTGAAGAAAGAAAGGAATAATGTACTGTACTTCCCTGTACTCTTATTTTAAAAACTTGTGCTGTGCAATTAAAATACTCTTATTCCAT EMBV3_37752 CGGCATCAGGCACTTCCCTTTTAGCTGCTGGCTGTTCCATCTGCTTGACTGATTTGGAGT Gene BVT0101_077166 + 1 EMBV3_07236 GK000013.2:57596871-57655458 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37463 GCCTGGACCAGCCGCTCTTTCAGCACTGGGGTGATGGCCCTTCTGAGAGAAGCAAGTGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23389 GTGCTATGGGCTTTGATAGGAATGCGGTAATAGTGGCCTTGTCTTCAAAATCATGGGATG Gene GeneID:281225|UBE2K:NM_174080:2_cdna Constitutive 2 NULL GeneID:281225 6 GENE UBE2K E2-25K HIP2 HYPG LIG ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) EMBV3_38163 GCTTCGCATTGATTTGTGCTTGTTTAACCATCCTTGTGACCCTGGAATAAATACCACTTG Gene BVV0102_237068 + 0 NULL GK000020.2:39820749-39829617 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117172 1 XLOC_071338 NonCoding TCONS_00117172 XLOC_071338 NonCoding NonCoding - 20:39825171-39825797 - TSS87640 626 2 TCONS_00117172_1 43 0.992012779552716 1 0 0 0 0 0 0.000128818897613479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.67805591545871e-05 0 0 0 0 0 0 XR_230738.1 LOC101906761 PREDICTED: Bos taurus uncharacterized LOC101906761 (LOC101906761), 5e-40 168 76.25 0.407348242811502 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 6e-65 251 72.84 0.741214057507987 0 noncoding 0 0 0 0 -0.168141966943503 0.248808233659626 -0.0114050584080343 0.80425285216085 AATTTTAAACAAGATTGTTTTCTAACTTTCACTTTCTGATAGTTCATTGTTGGTATAAAGAAATGCAACAGAGTTCTGTGTATTAATCATGTATCCTGCTACCTTGCTGAATTCATTTGTTGGTTCTAATAGTTTTTGTGTAAAGTCTTTAGGGTTCTCTGTACAGAGTATCATGTCATATCCAAATAATGACAATTTTACTCTTCCCTTCCAAATTTAATACCTTTGATTTCATTTTCTTGTTTGATTGTTATGGCTAGGACTTCCAATGCTGTGTTGAATGGAAGTGGTAAGAGTGGGCATCCTTGTTTTATTTATGAATTTAGCAGGAAAGCTTTTAGTTTTTCACTGTTGAGTGTTATGTTGGCTGTGGGTTTGTGGTAAGTGCTTTTATTATGTTGAGATATGTTCCCTCTATACTCATTTTGATGAGAGGTTTTGTCATGAATGGATGTTGAATTTTTCAAATGCTTTTTCTGTCTATTGAAATGATCATGTGGTTTTTGTCTTTTCTTTTATGTTAACGTAATGCTTCGCATTGATTTGTGCTTGTTTAACCATCCTTGTGACCCTGGAATAAATACCACTTGATCATAGTATATGATCCTTTTTATGTATTTTTGGGT TCONS_00113918 TCONS_00113919 . 5' 3821 TCONS_00113918 TCONS_00113919 . 5' 3821 EMBV3_16131 CTGCGAGGTCAGGGCCGAGCCACTGCTGACTTTGGAGAAAACGTGGGTTTGCTTTTTAAA Gene GeneID:528606|EHMT1:NM_001099041:77_cdna Constitutive 0 NULL GeneID:528606 11 GENE EHMT1 MGC157157 euchromatic histone-lysine N-methyltransferase 1 EMBV3_01231 TGCAAGTACTCACTAGAACCCGCATAACCATGCTTCACATGATCTCTTTCTTTGTCTCTG Gene GeneID:537010|STRN:XM_002691282:361_cdna UTR3_Alt 2 NULL GeneID:537010 11 GENE STRN NULL striatin, calmodulin binding protein EMBV3_08726 CCAAGACATATGTGTCTGCACCTTCCTCTGGGATGTCTTCCTTGGAGGTCTTGGTGTTCA Gene GeneID:768210|RELL1:NM_001078098:44_cdna UTR3_Alt 2 NULL GeneID:768210 6 GENE RELL1 MGC143350 RELT-like 1 EMBV3_18592 AAGCTCACAACCACCATTACAGACATTTGGCTAATTACTACAAAACTGGGAGTTTCTGGT Variant GeneID:282524|SLC25A16:NM_174672:242_cdna 238^371 1 EMBV3_23432 GeneID:282524 28 GENE SLC25A16 NULL solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 EMBV3_32193 TTGACCACATCACCTTGTTGGAGGGTGTGATTGTGCTGGAAGAGTTCTGTAAGGAGCTGG Gene GeneID:522276|MGC152084:NM_001077948:48_cdna Constitutive 0 NULL GeneID:522276 26 GENE MGC152084 NULL hypothetical LOC522276 EMBV3_29314 AACTCAGGTTTAGGCCTTTGTCCAGAAGAACAAACTGCTGAAGTGGAGACCGAGGATCCC Gene GeneID:281681|CENPE:XM_002688095:159_cdna Constitutive 0 NULL GeneID:281681 6 GENE CENPE NULL centromere protein E, 312kDa EMBV3_09251 GCTGTACTGCCCGGAGGATACTGGGAACATCAACAAATGCCGAATGGACCTCTACTTCTT Gene GeneID:513984|SLC15A3:XM_002699238:202_cdna Constitutive 0 NULL GeneID:513984 29 GENE SLC15A3 NULL solute carrier family 15, member 3 EMBV3_26767 GAACTTCATCACTGTCTCCCTCTTTATAGTGTCTGCCTGCGGTCCATCTGACTCCAGCTG Gene BVT0102_308013 + 0 NULL GK000007.2:2931919-2948733 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05066 GCTTCCACTTAACTGACTGGCCCGCAATATTGTAGGAACAGCATGTCCTTTGTACTGTGG Gene GeneID:280794|FN1:NM_001163778:16_cdna Constitutive 0 NULL GeneID:280794 2 GENE FN1 NULL fibronectin 1 EMBV3_09957 GGACACAGACAATATGCACAAAGGGAAGATCAGGTGAGACACAGGGAAAAGGGCTCCATC Gene BVV0102_171119 + 0 NULL GK000003.2:78473784-78516233 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19999 ACATACCACATTTTATGTAACCATTCCCCTGTTTTGGAACATTTGGTTACTTCCAATTGT Gene BVT0102_421758 - 1 EMBV3_29398 GK000030.2:4735502-4753537 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13443 ACTATGTGGAAAGTTTGAACGCATGACCTGAAATAGTCCTCACCACTCCCGAGGTGGGGT Gene GeneID:507217|LNP1:XM_002684709:38_cdna UTR3_Alt 3 NULL GeneID:507217 1 GENE LNP1 NULL leukemia NUP98 fusion partner 1 EMBV3_11318 CCTCCTCCATCAGAGGGCAGACAGAAGAAGCAAAAAGAAACACAGTCCCACAGCAACTAA Gene BVT0101_022675 + 1 EMBV3_30519 GK000010.2:38447566-38473474 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24810 CCTGGTTCTGGCTTCTGGACAGTCTTTCCGTTCCGTGGACCCCCACTTTCAAGAGGTGGC Variant GeneID:520497|OGG1:NM_001080285:122_cdna 423^626 1 EMBV3_43774 GeneID:520497 22 GENE OGG1 NULL 8-oxoguanine DNA glycosylase EMBV3_18710 GGCCAGGAGGTCTCTGGAGAAGGAGAAAAGCAAGAGGACCAAAGTACAAGGCTGTTTCTC Variant GeneID:507353|C23H6orf129:NM_001080236:17_cdna 186^391 1 EMBV3_34734 GeneID:507353 23 GENE C23H6orf129 C6orf129 MGC148715 transmembrane and coiled-coil domain-containing protein C6orf129 homolog EMBV3_13778 ACAGGAACAAGAACACATATAACACTTCTTGAATGCATGGGCCTCGATTCGGATGTGCAG Gene BVV0102_013640 + 0 NULL GK000010.2:69462866-69776342 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23355 GGAGTTAGAGCTTTTGTTTGCAAATATCTGAGTGAAAAGAAGATAAAGACAACAGTACTA Variant GeneID:615658|CAMLG:NM_001037625:46_cdna 687^752 1 EMBV3_15176 GeneID:615658 7 GENE CAMLG MGC133772 calcium modulating ligand EMBV3_23156 TCCTGTTGTGTCTGAAGAGAACCATGAGATTTAGCAGCATATTGGTAACCCATTAGGTCC Gene BVT0102_115090 + 0 NULL GK000016.2:28033720-28066373 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066904 TCONS_00066905 TCONS_00066906 1 XLOC_041310 Coding TCONS_00066904 XLOC_041310 Coding Coding FBXO28 16:28009797-28037743 = TSS50435 5382 1 TCONS_00066904_1 368 5 0.807586330291644 4.71011022350858e-09 2.70102971336699e-05 2.64835755608763e-10 4.00134890957368e-09 1.18454146218732e-12 1.98358038518282e-09 7.78448558860198e-05 2.89588139630763e-09 4.03875126814744e-09 9.25989139114933e-05 1.77982020584455e-05 5.36491386256698e-10 6.85470695736052e-07 4.02029745357164e-05 5.60636754667685e-06 0.00165048905426988 0.0017101000960539 9.2041597715055e-08 4.30742520390606e-09 1.52999808556494e-08 1.736577425011e-13 0.000983673404657228 0.000741646209429197 0.00112602203506525 6.46113066607019e-08 1.95602811678487e-08 2.72771632011472e-05 9.40965045449972e-05 4.18544983296326e-09 2.94610679523118e-09 NM_001046425.1 FBXO28 Bos taurus F-box protein 28 (FBXO28), mRNA. 0.0 2434 99.78 0.252136752136752 NM_015176.3 FBXO28 Homo sapiens F-box protein 28 (FBXO28), transcript variant 1, mRNA. 0.0 5844 83.91 0.998885172798216 TCONS_00066904_1 sp|Q2NL16|FBX28_BOVIN FBX28_BOVIN F-box only protein 28; 0.0 749 100.00 0.997282608695652 0 coding 0 0 0 0 0.0418971779434432 0.683716082427823 0.0247349007836871 0.736323723348508 TGTTCCACTTGCAGAGGGGGGAAGGAATCAAACCCCCAAGATGGCGGCAGCGTCGGAGGAGCGGATGGCTGAGGAAGGAGGCGGTGGTCACGGCGACGGCGGCTCCCCTTCGGCCATCGCCTCTACCCAGCGACTGCCCCCACCGCCCCCGCCCCAGCCCCCGCAGCCGGGGTCCCAGGCGCCCCCAGCCCCGGCGCTGGCTCCGGACCAGCTGCCTCAAAACAACACGCTGGTGGCGCTGCCCATCGTAGCCATCGAGAACATCCTCAGCTTTATGTCCTACGACGAAATTAGCCAGCTCCGTCTGGTTTGTAAAAGAATGGACTTGGTCTGCCAGAGAATGTTGAATCAGGGATTTCTAAAGGTGGAAAGGTACCATAATCTATGTCAGAAACAAGTTAAAGCACAACTCCCAAGGAGAGAGTCAGAAAGGAGAAACCATTCATTAGCTCGGCATGCAGACATCCTCGCTGCTGTTGAAACAAGGCTGTCATTATTAAATATGACTTTCATGAAGTATGTGGACTCCAATCTCTGTTGCTTCATACCAGGAAAGGTGATTGATGAGATTTATCGTGTGTTGAGATATGTCAATTCTACCAGAGCCCCTCAGCGAGCTCATGAAGTCCTTCAAGAGTTAAGGGATATTTCCTCCATGGCAATGGAATACTTTGATGAAAAGATTGTTCCAATTCTAAAGAGGAAATTGCCAGGATCAGATGTATCTGGAAGACTCATGGGCTCTCCTCCAGTTCCAGGACCGTCTGCAGCCTTGACTACAATGCAACTCTTCTCCAAGCAAAACCCTTCAAGACAAGAGGTTACCAAACTCCAGCAGCAGGTTAAGACAAATGGTGCTGGAGTGACTGTTCTCAGGCGTGAAATTTCTGAGCTTCGCACCAAAGTGCAAGAACAGCAGAAACAACTTCAAGACCAGGACCAGAAACTGCTAGAGCAGACCCAGATCATAGGTGAACAGAACGCACGGTTGGCAGAGCTGGAGCGCAAATTGCGAGAAGTAATGGAGAGTGCAGTGGGAAACTCCTCAGGGTCTGGGCAGAGCGAAGAGTCTCCTCGGAAACGAAAAAAGGCCGCAGAAGCCATAGACTCTCTTAGGAAATCTAAACGTCTCCGGAATAGAAAGTAAATCGGAACGTGCTTCTAGCGCCAGAGGAAGACCTGGCTTTGTAGCTTGACCAGTTCTGCGTATCTGGACACCGCGCGACACGGTGTCCCTCAGCTCTAGGCTTTCAGAACACAACTTGAACTCTCATGGTTGGGACTTTTTTTTTTCCTGCTTCTCCTCGTTGAACTGATGCACAGAATCTTTTTACTTTGCAATAGATTTGTACTAACCAGACCTATTCTATCATGTTTTGAGAAGTTAACCTTTTTTTGTGTGCAGATAATGTTTAAAGCAAATTAGTTTCTGCATATATGCACATTACATAAGGATCTTAAACCAGTCTTGACAGACTAGAAACTAAGTTTAATACAGAAAATGTCCTGTTCACTTGAAAGAGAAGACCTACTTTTTAAATGGACAGTATCTTGTTTTTAAAAAAAAAAAAGTTGACTTTTTGTTATAAGTGACCTTTGTCTGGAATGTCTGAAAAGTAGTAAATGCTTTTTGGTATTGAAGTAATGGGTAACTAAAACGGACTTCCATAGTATTGACTGTAGAAGGGGCCTCTACAGTATTGACTATATATTTTTATAAACTACTGGCAAGGGACTTACCCAGTTGTTATATACATGTTTTCAGTTCTCTTTTGGGGCCATGACCTACATTTGCATGGATGCATGCATGCATTGCCTAGTCAATTCACTTACAAAAGCTCTTGCACTGGTATTGATCTTGAACCTCTATACTTCTCCACTTTTTAGAGCAGTGTCTTAGTTCATTTAAGCACTTAACATCTTCCACTGTAACAGCTTGCTTTGGTGGGTGAGGGGGAGTGGTATTTGTATGTCCATTTGTCCTCCGGTTTTACAGGATTAAGAGAGTATTAAAGCCCGCTGCTTTAGCTGTTCTCTGTAGGGTTCAGGTACACTGGCTAAGACAGAACCCCAAATTCTTTATGTTGATATCAGACCTCTGGTAACTATTACTATTCCTGACTCACCACTGTGTATGCTCATTGATCCATTGTGGCCATGACCAGTGGTATGAGTAGGGAACCCAACTTATGGGATGCAGTTGTTTTGCCATTGAAAAACAGTTCATTGAAGAAAATTGTACTATGAAAAAGCATTTTGATTGTTTCATTTCTGGGGGGTGACCTGAGGGAAGCTTTTTAACATTAATTTCAGGCTTTCCTTATCCTTCAACTTTGAACAAAAGCTTTAATTTTGTTTGCACTCCTGTTTTGAGCTTGTAACTGGAAAAGCATGTCTTGCACTGTCAACCTTCTGAGTGGTCACTTTAACACCTGTACAGTGATTATTCTCCCCAGTTGTGTATTTTTTGGAACAGTCAACTATTACTGTCTAGTTTTATTTTAATGTACTAAATTATGTAGTCATTATTTGACTGTTAAGTTAAACAACTGTTGCCTTGGGCTTCAGTTATTTAAGGTAAACTTAGGTGTAATATAGAATACTATCCCTTTCCAGGTGGGAGTTTGACACCTGTATAAAACCTAAGGTTTTGGTAAGTACCTTAGTTGAAGAAAAGCACAAGGTCACTACCTTTTTTTAATCCGTCCAACATGATATGGTTATGCATCCTTGAGATTAACTTCACCAAATGAAACTTCTTATCCATTTTTAATATTGTCCTTACATAATAGTGTCCTTAGATTTTGATCAGTTCTTTGTCTAACATTAAAACTCCATTCACAATGTAGTTATGTTTTCAATGAAACATAAAATAACGTCCAAGTGTTTTCATGGTTTGTTGGGAAGGTAATTTTAAAATAAACAATTTCCAAAAAACATTTGTCAGCCAAGATCATCCATAAAAGTCCCTGTCTGGAACTCATTTTCTCAGCAGGTCTCATTTGTTTAGTCATAGGATTTAGCCATATTATCACAACTTTGGAGGAGGCCTACTGGAATACTTACTCATGGCCTTTAATAGTCTGCTTTCCTGGTAATACGAAGATGTTTTTAAGTAACAAAGTACATGTTTACAGGTTTATAAAGTATGATCTTTATGCATCAAAGGGATATGACCTCAGATGATCTTTTTTAATAATGTTAATGAATTATTTAAAGTTTCCTGGGTTTCTTTTTAAACTCCAGCTAGATAACCCTAAATGTTTCTACAGTCTTAGTTAACATGAATATTTGGCTTCCATAATAAACATTCACACTATTAAAAGATAGATTTTCTGTTTCAAAATCCAAATTTCTACCATATATACTTGTAATCATCTGCCCATAAATTTAATGAGTTGCACTTGTTAATGGGTGAATGTGGCATAACAGTAGGAAATAAAGCACTACAGTTGTTTTAAATCTTAACTAGCTAAAATATGTTAGGATATTGCCTTGGCCAGTTTGATAGCTGTTATACTTGCATTTGGGTAGTATAATGATTTTTAAGTGTCAACAAATCACAAAATATTTCCATCACCTAAAACTGACATATGTTACAGGAAAATTGTAAGTTAGCAACCCGAGAGAGAACTATCCTGCTCTGGATTGTAGGTCGGTAATTTAAATACTGTATGTTAATATGTTAAATGTTAGGACATTTCATAGAGTATTCCCATCATCTTCCTTGATTAGTCTTTCAGAGGATACTTAAAGTTGTCCCATTTGCAAACTGATCACAACACTACAGACAGATGAAATGTGGAAGGGCGGATGAAAAATGGAAAGGACTGCCGCCCCCTCGCGCCCCACAGGAGTCTCTGCTTGTTTCCCACGTGGACTTGACTTGGTTTTCACGTATTCTGAACTGTGTATTATTTCAGAACATGAGGATATAGAACCTGTTGTTTTTTAAGCTCCTCTTTTGATGTACAGAGCCTGGAAATAAGGGCAAACACAGATGTAATCAGAGTAATCAGTAATTATACTGTTTTAAAAACTTGGGGTGCCATCAGGTCTAAAGCCACTGGTTTTGGAAGCAAATTTTTTTTTTTTTTTGGTGTAACATGTTTTTGGAGTACTGAACTTTACAGGGGCTTGCCTTAATCTCTATTTAGTAGTTTCAAGATATATGCGCTATTATTCTACTTGTTAAAATATTCTATGTAGCCCCTAAGGTGGGTAAGAGAGTATAAGTAATGCCTAAATAAATAAGCTAAAAGGTGTCACTACAGCTGGATTTTTGAGAGAAAATGGACATATGAACATAGGCTATGTGTAATAAAAATAATGGCACCTTAAGATTGCACTATTTTATGCATTATTTTATATGCCATTTCATAGCCTGCACTTTAATCTCCAAAGAAATGATGTGTGATGTCCCAGTTGTTCCTTATTAATATCTGTTTCCTGAGACAGGGCACTTAATTCTATTTTACTATACCGAAGTAGTTTCTTGGAGGTAGATTCCTCTTTTGAGTTCTCTATTTCCTTAGCCATAATATTTTCTAGGATCTAGGAACTCCCTATCTTGTCTTATTTTCAACAGTATATAATTTTAATTTAAAATCTCATACTTGGTGATCAGCACATTCTTAATATACTGCTCTAGCAATGAGTACCCATTTGTTAACACTTACCAAACCTCCTTCAGAATAATCATACGTTGTAAAATTTGAAACCAGGAATAAAGGCATTCTGCCTTGTACGATGCAGTCTCTTGAAAAATGGCTGTTCCTAATGTAAAATCCAATACATGCAGTGATTTGGCTTGGGATCTGAATTTCTTTCACTAGTCTTAAAAGGTTAGCAAGAACTACTTCAAAAAGCTCTGTAGCCTGCCATCTTGAGGTGAATTATTTTCAAGAAATACTATATAATCTACAAAATGAGATGAGCAATTAGTTGACTGCTGCCTACCATAAGTTTATTTTTAATAGCAATACATTTATATTTGTGATAAATATAATAGGCTTAAGTAATGGCCTTTTCCAGCTTCCTAAGAATCTTTGTTAAATTTCTGAAATTCAAACGTCAAAAACTGAAATTTTTCCTGTTGTGTCTGAAGAGAACCATGAGATTTAGAAGCATATTGGTAACCCATTAGGTCCATTGCCAAAGTAGATACTGTTCCGTATTCAAAGCTATACCTAAAGTTAGATGCGTTTACAATTCCTTTATGTTGTGCCATGTCTGTTTACTTATGGTCATGAGCAACAATAAATTACAGTAGTTTATCTGGAATTTTAATTGTTAAAACCTAATTTAATTACTGGAAAGTGAAAAACACCTCCCGGTCACACAGCAGGGTGCATAAATAAATGTGTTGTTACCAGTGCTACC EMBV3_32709 GCTGGGTAGCACCAAACATTTATTATTTAGCTGAAGCAGCCTATGGACATATTCTTATCT Variant GeneID:530188|DBR1:NM_001080290:42_cdna 358^443 1 EMBV3_02784 GeneID:530188 1 GENE DBR1 NULL debranching enzyme homolog 1 (S. cerevisiae) EMBV3_16227 TCCAGCACACGTACAGGAAAGGCGTGAAGAACGACGACAGGACCGACCACCTGTCCTGGG Variant GeneID:338054|ARHGDIA:NM_176650:36_cdna 490^621 2 EMBV3_41184 GeneID:338054 19 GENE ARHGDIA NULL Rho GDP dissociation inhibitor (GDI) alpha EMBV3_02522 GCCTGATAGTCGAACTTCTGGAGCTGCAGGCCCTCGTTTTGGAGAACCTGGCCCTGAGGG Variant GeneID:512506|RANGRF:NM_001037460:18_cdna 286^378 4 EMBV3_13315 GeneID:512506 19 GENE RANGRF MGC133973 RANGNRF RAN guanine nucleotide release factor EMBV3_17744 GAGATCTTAACATAGCTTATTGTGGAAGGAAGCCAAAGTTACCAATGCATAGATATTTTA Gene GeneID:537873|PLCL1:XM_002685495:244_cdna Constitutive 0 NULL GeneID:537873 2 GENE PLCL1 NULL phospholipase C-like 1 EMBV3_28447 CGGAAGAATCCTGAGTTCCGGGTGCAGTTTCAAGACGACCTGATCAGGGCCATCAAGAAA Variant GeneID:505628|SNF8:NM_001075211:59_cdna 281^496 4 EMBV3_06665 GeneID:505628 19 GENE SNF8 MGC142498 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) EMBV3_23506 TCCTCAGCACCCTGAATTCCTGCGTCGACCCCCTTGTCTACTATTTCTCATCATCTGGGT Gene GeneID:527517|FFAR3:NM_001145233:652_cdna Constitutive 0 NULL GeneID:527517 18 GENE FFAR3 GPR41 free fatty acid receptor 3 EMBV3_21462 GGTAGCGGCGGCGACACGAGGCTCGGGGAGAGGCGCCAGTGGCTGCAGGAGGCCATGTCC Variant GeneID:512757|HSPBP1:NM_001046131:163_cdna 59^355 1 EMBV3_21997 GeneID:512757 18 GENE HSPBP1 MGC128574 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 EMBV3_31160 GAGGAATGTACAGTGTGGTGAGACAAGAAAATGGGTGGACTGTAGGTGTGCCTCGGCAGT Gene GeneID:540021|PHC1:XM_002687815:105_cdna Constitutive 0 NULL GeneID:540021 5 GENE PHC1 NULL polyhomeotic homolog 1 (Drosophila) EMBV3_37723 GTGACATGCGTTTCATACAGAAGTACCTGCTACAGAGACATGAGAAGATTCATACTGGTG Gene GeneID:613265|ZNF148:NM_001033121:89_cdna UTR3_Alt 2 NULL GeneID:613265 1 GENE ZNF148 NULL zinc finger protein 148 EMBV3_27937 CTTCTGCACCGACTTGGAAATCTCTCTCTTCTTCTGTGAAGCTGTTCAGGTCATCAAGCT Gene GeneID:100139679|LOC100139679:XM_002688796:196_cdna Constitutive 0 NULL GeneID:100139679 7 GENE LOC100139679 NULL similar to olfactory receptor, family 7, subfamily G, member 2 EMBV3_22154 GACGTGCAGATCAATGACATTTCTCTGCAGAACCCCCTGCAGGTCCTGGTGAACGCCATC Variant GeneID:506229|RPS5:NM_001015531:19_cdna 166^375 1 EMBV3_17283 GeneID:506229 18 GENE RPS5 NULL ribosomal protein S5 EMBV3_03659 TCTTCAGTCTTCCTTGACCCTGTAATATGTCCAGCCCTCTGTTGGCCTTGTCTCAATAAA Gene GeneID:507675|SDAD1:NM_001102489:50_cdna Constitutive 0 NULL GeneID:507675 6 GENE SDAD1 MGC139231 SDA1 domain containing 1 EMBV3_04466 CATGAGGACCTTATCAACCAACCCAAAGGGCCACTACGAATTAAACAAGCACAGAGAAGC Gene BVT0102_177701 - 0 NULL GK000027.2:25707676-25845096 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07067 GTCGGTGACTGACCGGGCAGCACAGACCCTGCTGCATCGCCTGCAAGCTCTGTGAGGCCG Variant GeneID:287027|NDUFS8:NM_174818:482_cdna 380^531 1 EMBV3_38894 GeneID:287027 29 GENE NDUFS8 MGC134156 NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) EMBV3_29162 TGTCTGGGGGACTGCAACATGGCGAATCAGTCTGTCTGGGATCTAAATTGGAGAATCTGC Gene BVV0102_077278 - 1 EMBV3_11892 GK000027.2:5625558-5715232 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00200893 TCONS_00204180 TCONS_00025022 TCONS_00118521 TCONS_00185879 TCONS_00233184 TCONS_00118479 TCONS_00206254 TCONS_00173129 TCONS_00166670 TCONS_00041593 TCONS_00235856 TCONS_00025023 TCONS_00118520 TCONS_00058128 TCONS_00173128 TCONS_00200894 TCONS_00252668 TCONS_00206255 14 XLOC_122544 XLOC_124364 XLOC_014641 XLOC_072652 XLOC_111932 XLOC_142666 XLOC_072637 XLOC_124865 XLOC_104301 XLOC_101506 XLOC_025399 XLOC_144309 XLOC_035925 XLOC_155609 Coding TCONS_00233184 XLOC_142666 Coding Coding - 8:85172131-85174612 - TSS174688 2481 2 TCONS_00233184_3 151 0.780733575171302 1 0 0 0 0 0 1.98999434152439e-06 4.31301344875394e-07 2.56422969758855e-06 0 6.71380077273372e-07 8.8801666666952e-05 3.88443295009467e-05 0.000132294534016694 2.8751935109907e-06 2.46643871295642e-05 2.25468193324039e-05 0.00421391208211377 0.00209932308668206 0.0043783197301723 0 5.79721118306558e-06 1.01965928236973e-07 0.00172424396554993 0.00200976603821132 0.00309294870850137 0 0 5.90401748181516e-07 0.000191769600364311 0.000138520021233263 0.0010634967371462 XR_139745.2 LOC100847679 PREDICTED: Bos taurus uncharacterized LOC100847679 (LOC100847679), 2e-103 381 82.55 0.137041515517936 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 2e-07 62.6 70.00 0.0669085046352277 TCONS_00233184_5 sp|P10266|POK10_HUMAN POK10_HUMAN HERV-K_5q33.3 provirus ancestral Pol protein; 5e-43 154 52.14 0.964539007092199 2 noncoding ATTAATTGGTATGGTTTGATGTGCTGTGATGATATATGCTCTATATACTGTATAATTATATTATATATGTGTGACATGTATTATTACAGTACATTGGTTTGTGTTGGCTGGTATTAGCTGTGTACGTGTTGTATTGCTGTAATATATATTAATTAACATATTAATTATGAAGATTAATTCAAGTATATTATGTCAATAAGTTTATACTTGTTGCCATGTATAAATACATATATAAATACATTTTGCATTTAGATATATTTGTTTACCAAAATGAGATAAGGAGGTTATACATTTATTGTTTAAATTTATACAGAGACCTAAACTAAACATTAGACCTAAATTAACATATCCCAAAATTTATGCTGTTAAAATGTAAATTTTAAAAATTTAAAAAATTAAATTGACAACTGCTTGACAATTCTTTTACCATAAAACCCCCATAGGTGTAATTGGGGTAGCCAGACAAAAAATTGGTTTTATGGCAAAACGGCCCCCTAGAATGGGTCCATCTCCCCGCCCAAGCTAAAAAAATAGTGGCTTCTTATCCAGGATTGATAGCTACGTTGATATTAAAAGGAAAAAAGTGGAGCATTGAATTATTTGGTAAAGAGCCATCAGAAATTGTAATTCCATATAATAAGGAACAACTTGATGCTCTTCTAATGTTTGAAAATTGGCAGATTGCTATAGGAAACTATTTTGGTCAAAATTTTTGCATCATTTACCTTCACATGTTTTGCTAAATTTTATATCCAGACATCCAGTTATTTTTCCTGTCAGATGTAAACAATCTCCTATTCCAAATGCTCAGATAGTTTTTACTGACGGGTCAGCAAATGATAAAGCCTCCATAGTCACTAAAAATCACCAAAAGGTTTTAGAAACACGGGAAACTTCAGCTCAAAGAGCTGAAATAACAGCAGTCATAGAGGCTTTTGCTATGTTTGGAGATGAGGAATTTAACCTTTATTCTGATTCTCAGTATATTGTCAGGTTGTTTCCACACAATGAAACTGCGGTTTTGCCTGAAAATAAAACTACCATATTTCATTTGTTAAGTAATTTACAGCAACAAATTTGGAAAAGAAATAAAATATTTTTCACTGGACACATTCGGGCTCATTCCGGATTGCCCGGCCCTTTAAATGCCTTTAATGATTTGGCTGACTTGTTAACCACAAATACAGTGGCTACTGTGATTGAGGAGGCCAGAGCCTCTCACTTACTTCATCATCAAAATGCTACTGCTTTAAGATATCAATTCCAAATTCCCAGAGAGACTACTCGAGAGATTGTGCGCTCTTGCTTACACTACCCCACTGTTTATAATATAGTCTACCTACGGGAGTTAATTCTCATGGTCTCAAACCTAACATACTCTGGCAAATGGATGTAACTCATATCTCTTCATTTGGAAAACTTTTCTTTGTTCATGTAACTGTAGATACCTTTTCTCATGTCATTATTGCAACTTCTCGTACCGGAGAGGCAGTTAAAGGTGTTATACAACATCTCTTTACTTGTTTTTCATATTTGGGCCTACCAAAAGCTCTGAAAACTGACAATGCTCCTGCTTACACTTCTAAGTCTTTTCAGGAATTTTGTTTACAGTTTCAAATTAAACACAATACAGGCATCCCTTATAATCCCCGGGGACAAGCCATTGTGGAAAGAGCACATCAAACATTAAAGCTTCAAATTCAAAAACTAAAAGAAGGGGAGTTTAAGTATAGTTCTCCCCATCAAATCTTGCAACATGCTCTTTTCGTAATAAATATTTGCTCTTTTCGTAATAAATATTCTAAATACTGACCTGGCTGGAACTACTGCAATGCTTCATCATTGGTGCCTGGAGCAATTGAATGCAAAACCATTAGTTAAATGGAAGGACCTCCTCTCCGGACAATGGAAGGGTCCTGACCCATTATTAACTAGCGGTCGAGGATATGCTTGCATTTTTCCACAGGATGCAGATTCTCCAATTTAGATCCAAGACAGGTTGATTCGCCATGTTGCAGACCCCCAGACATCCAGTTCCCCCATTGCTTCGATCACAAAAGAGGAGCCCGCCGGCAGGGGAGACAAGATAAACATCGAGATTCCGGCGAGACTGACAGGGCTGCTGCAGCGTGAACTCCAACCAGAAAATAATTCTACTTATTCTGTTTTAGCTTGTCCACCCTCGCCTTATGTTTTCCTTTTTACTAATGACTCCAACAAACTTAATGTAGGCATGAATTATTCAGGTGGACCTAACGTAGTGACTTGTGAACAATGTATGCTTTCATCTTATTTAAACCCTCAATGTAATGTTTGCTCCTTTGTAGTGTTACAACGCCCACCCTATCTTATGGTGCCTATATGATAGCTATGGTCTTACTGTGTTACAACAACTGCAGGATTTAATGTGATCGTGATGGTTTGTGGTCTTGCTTATCCTAGGAATATCAGCTTTGATAGCAACAATTATTTCTGTTACTG TCONS_00228509 TCONS_00228510 . 5' 24095 TCONS_00228509 TCONS_00228510 . 5' 24095 EMBV3_05440 GATCGATCTGGATGGGGCAGCTTTTGAGCATCTTTCCTGAGCCAGGAGGTTTGCTTGAAT Gene BVV0102_394070 + 0 NULL GK000013.2:424775-534159 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38583 GAACATCTACACCCTCATCAGGAAGCTCAACCTCAGGGGAAACGATTGTCGGCGTGATGA Gene GeneID:782159|LOC782159:XM_002700414:14_cdna Constitutive 0 NULL GeneID:782159 X GENE LOC782159 NULL similar to melanoma antigen family B, 4 EMBV3_37267 GAGCTGACCTCCCAGGCGGAAATGCTGAATAAGGTCCTCAGGGATAACCAGGAATACTTC Gene GeneID:618806|LOC618806:XM_002690861:241_cdna Constitutive 0 NULL GeneID:618806 10 GENE LOC618806 NULL similar to melanoma antigen family A, 10 EMBV3_00924 TGAAAATTACAGGCATTGACATACATGGCACCCAGCCCCCACCCAATCAAACCACTCCAC Gene BVV0101_052456 + 1 EMBV3_12529 GK000013.2:44952167-45166173 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20559 AGCCTTAGTTCAGGCCTTTATCATTTTTATCTGGACTTTCGAGCGCATTGTTGGCGAGGC Gene GeneID:100335664|LOC100335664:XM_002699905:164_cdna Constitutive 0 NULL GeneID:100335664 X GENE LOC100335664 NULL histone cluster 1, H2bo-like EMBV3_11696 CCCCTGGCTGCGCTCCCGCCAGGGCTCCGCGTAGTATGTGCCATGGCTATGACTAGTGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26844 AGTATGATGAGAAGACAAACGAACTACTTGGTACTACAAGAAGTTCTCCATTCCTGACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19429 TGCGACACTACATCAATCTCATCACCAGGCAGAGATACGGGAAACGATCTAGCCCCGAGA Gene GeneID:504216|NPY:NM_001014845:115_cdna Constitutive 0 NULL GeneID:504216 4 GENE NPY NULL neuropeptide Y EMBV3_37426 CCTGGTATCAGTAGATTGGTTTTGCTTCATGGTAGGCATTTGGGATCTTCGGTACCTGAC Gene BVT0102_210427 + 0 NULL GK000018.2:50642897-50655101 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083826 1 XLOC_051357 NonCoding TCONS_00083826 XLOC_051357 NonCoding NonCoding - 18:50650587-50652627 - TSS62893 1358 1 TCONS_00083826_5 105 0.480117820324006 2 0.334968121628249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00044536714422151 7.99609094605268e-11 3.19701323710437e-05 0 0 0 4.00723198281776e-05 0 0.000113701780959424 0 0 0 4.95112161504026e-05 0 1.32817992336558e-05 XM_005221556.1 PRKAA1 PREDICTED: Bos taurus protein kinase, AMP-activated, alpha 1 catalytic subunit (PRKAA1), transcript variant X1, mRNA. 7e-17 93.3 88.73 0.0515463917525773 0 noncoding 0 0 0 0 -0.0616769950932491 0.643708721382131 0.0297335382472363 0.640740130472701 CCTGAAAGCCATCCAGGAGTCTGGGTCTTTTGAGCATGAGCTGCCCATTTCCTTGATTGGATCCCTGCAATTGGCTCCCTGATGTACTTTTTCTTCAAACAACCTGGTATCAGTAGATTGGTTTTGCTTCATGGTAGGCATTTGGGATCTTCGGTACCTGACCAGGGATTGAACCTGGGCCTCCTGCAGTGAAGGTATGGAGCCCTAACCACTGGACCACCAGGGAATTCCCAAGACAGGACAGGTTTTGAAGAACTGTCATGATTCAGTGCATCTACACACTTTATTATATGTTACCATTTTTACCATGTATTTATTTAGGGAAAGAAAAAAAACTCTGACTCAGTGTGGGGGGGTGGTCTCCTGTATCCTCTCCTGTACCACCAGGGAAGTCCCCTTTTTTCTGTTTTAGAAATAATTTTTTCAAATACAGAGATGGGAGAGTTTTTTTGTTTTCTTTTCTTTTTTTTAAAGCAATTTATTTTATATCCCAGATGTCATATTTCTCCCGCCCCAGGGAAACCACTCTCTTACAGTTACTAGTCTGACATAACTTTTCATTCTTTTATTACATATGTGTGCATCCAACAGAAGATTTGGGAATCTTTTGCAGGTTTAAGAACTGGATACACAGGACAGCACATACCACACAAATATCTTTCTGCAACTGGTCTCTTTTTCTTCCATTTTTGGGGTCACTCATATCCAGTCAAGGCAGCTTTGATGCATTTGTTTCAACTCCAGGCAGGCAGTTCATGGAACTGCTTTGACAGTTTCTCTTACATAAAGCACTGAATCTTTCTCTTGGTTAAGAATTTCCTCATTTCAAGTGCCTGAGTCACGGGGGTCTGGTTCCTTCTGCTGCAACATTTGGTTTCAATCTCTCCTCTCCTATCTTTCCTTTGGATCCAAACTAATCTCCTCTAAGCTCCTGGCATCCAGGCCTCCAGGCTCCCACCTACCTTCCATTCGAAGCCAGAGAGGGTCTTTATTTATTTTATTTTTAAAAAAATTATGATTTTTTGATCTTGCCGCATCACACATGGGATCTTCTCTGACCAGTGATCGAACCTGCACCCCCCTGCCGTGGAAACACAGAGTCTTAACCACTGGAAAGCCAGGGAAGTCCCAGAGAGTCTTTAAATTACCCATCTTTGATGATTTATCTGATGCTGGTTGTGTTCGAAGCCCAGAGTTGGACAGGGTCCAGGGCAGGGGCAGGGTTCATCTTCCCCACCCAGCAACAACCGACCAGGAAGACACAGACATAAGTGGGATGAAAGTGTACAGTCTCAGCAGCTGGCTTTGGAATTCTCTGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAA TCONS_00083828 s 5' 2272 TCONS_00083828 s 5' 4311 EMBV3_23468 ATGCATGATGTCCATGACCCATTTATGGTTGTGTTCCCCACCCCCCAGTGATGCACAGTG Gene GeneID:539253|ASB16:NM_001101188:269_cdna Constitutive 0 NULL GeneID:539253 19 GENE ASB16 NULL ankyrin repeat and SOCS box-containing 16 EMBV3_14633 AGATTATCTGCAGCAAAGTTCCAACATGAGACTCTCTGCTCCCAGCTCCTCCCACCGTTA Gene GeneID:282021|PTGIS:NM_174444:739_cdna Constitutive 0 NULL GeneID:282021 13 GENE PTGIS MGC140775 prostaglandin I2 (prostacyclin) synthase EMBV3_34557 CAGTGCTCAGAGACCCACCTCGTGTTTGAGACCTCATCAGCCTGTGTCCGAAGTTTCTTT Gene GeneID:509974|GPR114:XM_002694793:619_cdna UTR3_Alt 3 NULL GeneID:509974 18 GENE GPR114 NULL G protein-coupled receptor 114 EMBV3_05894 AACACACTGAAGCAGAAGAACGGCTTCCCACCCAACTTCATCCACTCACTGGACTCCACA Gene GeneID:504757|POLRMT:XM_002689140:122_cdna Constitutive 0 NULL GeneID:504757 7 GENE POLRMT NULL polymerase (RNA) mitochondrial (DNA directed) EMBV3_15016 AGTTCCTAGACAGGTTGATAGGGAGTCTAGGGGTCCCCAAGGAGAGAGGGGTCTGAAATT Gene BVT0102_109037 + 0 NULL GK000008.2:77457767-77514021 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080713 TCONS_00132067 TCONS_00250681 TCONS_00220566 TCONS_00118040 TCONS_00087730 TCONS_00228570 TCONS_00228573 TCONS_00012285 TCONS_00161822 TCONS_00226167 TCONS_00221350 TCONS_00118487 TCONS_00111186 TCONS_00168038 TCONS_00166910 TCONS_00031886 TCONS_00175330 TCONS_00228563 TCONS_00229794 TCONS_00001867 TCONS_00001866 TCONS_00211020 TCONS_00006385 TCONS_00118491 TCONS_00001865 TCONS_00251851 TCONS_00232829 23 XLOC_049597 XLOC_080699 XLOC_153624 XLOC_133883 XLOC_072206 XLOC_052579 XLOC_138527 XLOC_007831 XLOC_098707 XLOC_137940 XLOC_134666 XLOC_072644 XLOC_067086 XLOC_102874 XLOC_101746 XLOC_018131 XLOC_105112 XLOC_139288 XLOC_000454 XLOC_129530 XLOC_001948 XLOC_154792 XLOC_142312 Coding TCONS_00232829 XLOC_142312 NonCoding NonCoding LOC100847350 8:77477463-77486164 i TSS174333 8701 2 TCONS_00232829_10 104 0.894954602919205 1 0 3.10340919959259e-05 3.43819317811763e-05 3.3394116686866e-05 6.86053877017172e-06 2.81313422876776e-05 9.60717884776429e-06 5.72739669474153e-06 4.21897174112452e-06 1.08590809446371e-05 0.00080518560403979 0.000594499975248856 0.000315194373781844 5.9122588696214e-05 0.000141872545817058 3.61992459944983e-05 0.019182380122937 0.00938490848834054 0.0139424192969624 2.9844168534795e-05 2.88368438996492e-05 6.41567857782085e-06 0.00721589200702696 0.00800410283614944 0.0112127734482551 2.1496616710923e-05 4.42232306467875e-05 1.64470915093085e-05 0.00221086190128059 0.0013257500690033 0.00321371174025574 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 682 89.90 0.0562004367314102 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-37 163 67.64 0.0589587403746696 0 noncoding 1 1 1 1 -0.0232353517562562 0.859133010155645 0.00669074351356383 0.887106186018768 GGTTGTTGTTGAATCACGCGAATACACCGGGATTTTTGGCCCCCAGAGGAGAAGAATTCAATCCAGGGCCAGAGATGAGGCTTGATTGCTCAGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGCAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGTACCCGCTTGCTAGTTTTAACAATGAAGTTATATAATCCAAAGAGTATCTGGAGGTTGTAAAGACCTCATCAGACCTACTCTCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTCTCATAATTAACATTTTAAGATAACAGAAGGTTGAATCTAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCTTCCTTGAGAATTTCAGACCCCTCTCTCCTTGGGGACCCCTAGACTCCCTATCAACCTGTCTAGGAACTGACTCTCTCATTCTCCCCCCTTTTTTTAGGAGAATTATGTTGTCTAGGGAAAAGGGGCGTCGTTCTCATTTTATAACTACTTTCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTTTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGTAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCAGAATTATTGTAATTAAGATAGTTGTCCACCATGGGGAACTAGTTAACGTTTCTCAAAGTGAGGCAATTGAAGCTTCAGGAGTATCCATGGCCCTAATCATCTTGTTCATGTGGCTGGTAAAATGAGTAACATTCATGCTCATATCAGGTATATATGTACAGCATTGGGTATGAACAATGGCACAAGTTCCTCCTTGTGTAGCTGTCAGAATATCTAGAGCCAATCTGTTTTGTAAAACCACCTTTCTAATTTGTGCTTGTTCAGCATTAAGAGCTGAAATAGCCTTTTGAGAATCTTGTAATGTCTGCTGAGTAAAATTAGTCAAAGCATCCACTCGTAACATAACATCTGTAGTTCTCAAAGAGGGAACAAACTCTGTAACCAAATAATCATACCAATGAAATACAGACCTTGCCCACCGAGTTTTAAGGTGGGGTAAATTAGCAGGCTTTTTTGGAAGCTCTGAAAATATAAAGCCATGAGTAAAGGCTAGACCCAGGGTGCATCTCTCTATCCAACCAGGGGGAAGCCATGCCCATAGGTAAGAGCCACATATCCAATAAGTCTCGTTTGGAGCAAGCCAGTGCGACTGAGATATCCAGTCTCAATTTGTGCTTGGCCAGACAAAGGGAGAACCTGAACTGGGATTGGAAAACACGGGAATGATTACATTGCATGTTTCCTGAGACAAATATCCCAATTGTTTCCAATCATTGTAAGTAAGTTGTTGGCTAACTTTTGGGGATTGCTCTGTTTGTTCCCAGCATATAGAGGCAGTAGATATTAAACGTCCTTTTTCAGGAGTTAGCCATGTAACCTCATCTCATATTTGATAAACGTCAGGTAAAAAACCATTAGATCTAGACCTATTTACCTTATATGTAGCAAAATAGTCATTGAACCGAGACAATGTATAATCAAAATTAAAAGTTTTTAAAACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACGGGAAGCCTTCCACTGATGAAGAGGGGAGCGCTCCACAGACCCAGCAGTTAGATCGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCCAACGGCAGACTCAGGATACTTGGAGTCAGCAGAAGTAAGCTCACATAGGTTATCAGGTCCATCTAAAAGGTACAAAGTCAGAGCATAGAAAGTAAAGACATGAAATGAAGTCACTTAATTTTGGTCAGGGTGCCACCTCTTAACTCGAGTATGATGTACCCACGAATCAATTTTTGGCACTTTGACAGCTGTGGGAGAAGAAAAAATAACCTGGTAAGGACCTTCTCAGAGAGGCTCGAGGGATGGGCCCCCAGATCCCAATGTTTTTATGAGGACCTCGGTTCCTGGCTCAAATAGAGGCTTGCTTGTCTCAGAGGCTGGGTCAGGAGTCGTCTCCCTGAGTTCTGTTAATGCCTGTTGAAAAGCTGAGAGCTGAGTTACATAATTAGTTAATTCCAGGCTTCAGGGTCTATAACAATGTCTGTGCATAAGAAAGGCCTTCCATAAATACCTTCAAAGGGGGGCAGTCCCTCCTTTTTGGGGGTAGTTCGAGCCCTCATTAAAGCTATGGGTAGGACTTTAATCCATTTGTCCTGCATCTCTTGAGTTAATTTGCGCAGATGTCTTTTGATAATGTCATTAGCTTTTTCAACTTTTCCGGAGGATTGGGGTCTCCAGGAACAGTGTAAGTGATATTCTATTTCTAGAGCTTTAGATACCCCCTGAGTTACAGCAGCTTTAAAGGCGGAGCCATTGTCACTCTGAAGGCTCCGTGGCAGCCCAAACCTGGGGATAATTTCATGGATTAAAATCTTTATAACCTCCTTAGCCTGTTCACTATGACAGGAAAAGCCTCAATCTATCTAGTAAAAGTATCTACCCAAACTTGTAAGCAAGAATATCCATTAGCTTTTGGCATATGAGTAAAATCAATTTCCTAATCTTCTCCAGGATACTTTCCACTTCGTTGTAATCCAGATTTTGCTAGCTTTTCAGTCTTTGGGTTATTTTTACGACAAATCTCACACCTTTTGATAATATTCTTTAAAGTTTTCATTACATTTTTACCTTTAAACAAATGAGAAACCATTTGGTAAGTACTCTCGGCACCCAAATGAAAACTCTGACGTAAACCCTTAAGAATTTTCCACTGAGCATTTTCAGGAATTATTAATCGTCCATCCTCAGACTGTAACCATCCTTTATCAGTAATCTTTGCTCTTCGTTTCTCATATCTTTCTAATTTTTCCTCAGTATATTGAGGTCTTTTTTGTTCCACAGGACCTGTCCAGATCAAAGGCGTCTGTAGTGAAGGGGTTTCGTAAAGTGCCGCTTTTCTGGCTTGACAGTCAGCCAGATGATTACCTTTGGCTATTTTACTCCCATCCCTGCTGTGCTCTTTGCAGTGTATAACAGCTACTTCTTTAGGACAATATATAGCAGTTAAAAGTCTCTCGATCTCTCTGAAATGTTTAATAGGTTCTCCTGTTGCTGTTTTAAAGTGTCTCTCTTTTCATATTGTAGCATGAGCATGTAAAGTCAAATAAGCATACTTAGAATCTGTGTAGATATTTACCCACTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTTCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGCCACCACTGCATAACCTGCTTTACGCTTTCTATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCACGTCAGGATTGTGTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGCGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATGTTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGTCCCAATTACTCTTAGGCAGTGGGGCCACCCACGTGAAACTACATCTAATTTTCTGCTCAGATAAGCAATAGGTTGTTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTTTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCAGGCAAGTTCCCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCAATTGTCTTAAAGTCATAGGTAGGGGATGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATTTGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGTCTTGTAACCACAGTCTGTCAGAAAGTTCAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGTTTCAGAGCTATTAAAGTTTTGTAGATCCCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGTCCTATATATTGTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAATGCACTAAATAGAAGACATCTTTTAAATCGATTACTGAGAAATATTTGGCCCGTTCAGGAATTTTAGACAATAGAGTATAAGGATTAGGCACCACAGGGTGTAAAGGAACTACATCCTCATTTATTATTTGTAAATCTTGAACTAGTCTCCATTTACCATTTGATTTTTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGAAATTAATAGTCCCTGCTCCTTTAAATTTTCGAAGATGGGTTTTAACCCTTCCTTAACTTCAAGTTTCAGTGGATACTGCTTCTTATGTGGAAATACATGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTCCTCGACCCACAGATTTTCCATCAGCCCATTCTCTAGGATTTACATCTTGTTCAATTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCATGATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATTGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGATGGGAGCTTGTGTGGGGACCCCCGGGCACCTTTAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTGCGCCTCTGGGGGCAGTCTCTCTTCCAGTGTGGTCTTTTGCAGACGGGACATGGAGCTGGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCTTTTCCACAGTAGTAGCAAGCCCATCCCTTTTTACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTTATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTTTTTCTTTTCCTCAAATTCCCTACCATAATAGACTGTCTGGGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGAGAAGGCCTTCTCTCAGTCTATATAGGAATTTACCAGGAGCTTCATTCTCTTCCTGTTCTATATCTGTGAATTTGCCATAGTTTAAAGGCTTAGAACACGCCTGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCGGTGGGGAGGGCCGCTATCTCGTTTTCTCTCTTTCCTACTGATTTATTACCAAACCATTCATCTCTATAAGCAACTGCTTTTCCCAAAACTCGAGTCTTTGACTTGGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGCCATAAAGCAGAGTAACACCTTTAAAAGCTCTAATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCAGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTACTCTGCACATATGATCCCAGGGATAGACTGGAGAAACCTGTTTTTTCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCTCAGGTACGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGATTTCACACCCAAATCTATACCCTTAGGACATAAGTCTGGAATATTTTGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGTAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGAAGTATCACATAGGAAGACCAAGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATAGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTGGGGATGTACCAGGAGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCTTTAACCTTGCTTGCCTCTGATGTCACCCTGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACCGCTGTGGGAAACTTTCGTCACCTGAGTGCCTGTGCACGACCCTGATTCCTGACTACAATAAGACCGACACGAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCCTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAACCCATCGCAGTCCCAATCTGGGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGTTTCCGAACTTTCGATTCCTAGCAAGGCTAGGCACGTTATTGGCTACCAATCCAAGTTTGGGACCTAAGCCACAGTACACAATAACAGTATAGATCACAAGTCCTTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACCCCCGACAGGTTTCTGCCATAAGCCCTATGAGATCACCATGGAACCGCAGAGCAGGGCTCCTTACTTGCTTCATGCAGGGCATGCCATTCATTCACACAAGCACATGGTAGAGTTAGTAAAGCACAGCAGAAAACGTGTTCGCTAAGAGAACAAAGAACTAAAGCTACAAGCATCCTTACCTTGTCCTGAAGGATCCCGGATGAGCCCCCAAGATGAAAGGTTGCTATTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGAAGGAGAAGAATTCAATCCAGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAACGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAAGTTATATAATCCAAAGAATATCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTCCCATAATTAACATTTTAAGATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCTTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAACTGACTCTCAA TCONS_00225953 . 5' 5269 TCONS_00225953 . 5' 5269 EMBV3_09305 AGGCTGCCCGAATCAGCTGATATGAGAAGGGCCTGGAGAAACAAAACTTACAACACAGAC Gene GeneID:532778|ARFGAP3:NM_001075974:183_cdna Constitutive 2 NULL GeneID:532778 5 GENE ARFGAP3 MGC137888 ADP-ribosylation factor GTPase activating protein 3 EMBV3_27419 TCTTCACCTCTGGAAGTGGGAGAACATCTGAGCTGGGGAAGACCTTGCTTGGTTTGACAT Gene GeneID:506522|WDR85:XM_002691689:6_cdna Constitutive 0 NULL GeneID:506522 11 GENE WDR85 NULL WD repeat domain 85 EMBV3_13453 AGGTAAAGAAAAGGGCTGGTGGGAGCATCCTGTGGGTTCTGGGGCAGGACTCGGAGCTAT Gene BVT0102_008228 + 0 NULL GK000004.2:108417310-108451357 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182799 TCONS_00182798 1 XLOC_110987 Coding TCONS_00182799 XLOC_110987 Coding Coding ARHGEF5 4:108448574-108471260 = TSS136551 5315 1 TCONS_00182799_6 1584 0.0238946378174976 14 0.766321357725369 0.000377597645309479 0.000227620552738419 0.000767828126890829 0.000537072682562898 0.00032465195477269 6.64687461319545e-05 1.0866539058643e-09 0.0001130275386325 0.000593445591457096 6.11559199728347e-05 0.000221596625979129 6.0546033032609e-06 8.63753901942392e-05 0.00010443459745523 0.000310669853032752 0.00221033120702212 3.47066269732843e-05 2.59263230049339e-05 0.000347058889516555 6.02217010805288e-10 7.99610549904118e-06 0.000761538395720381 8.62392881000236e-05 0.000727453021053998 6.91966163487825e-05 0.000450760310949355 0.000236455800760186 8.0844403881403e-05 8.06268283714795e-05 0.000382054578993084 XM_005205839.1 ARHGEF5 PREDICTED: Bos taurus Rho guanine nucleotide exchange factor (GEF) 5 (ARHGEF5), transcript variant X1, mRNA. 0.0 9571 100.00 0.998306679209784 NM_005435.3 ARHGEF5 Homo sapiens Rho guanine nucleotide exchange factor (GEF) 5 (ARHGEF5), mRNA. 0.0 3617 75.16 0.997365945437441 TCONS_00182799_6 sp|Q12774|ARHG5_HUMAN ARHG5_HUMAN Rho guanine nucleotide exchange factor 5; 0.0 1810 64.64 0.998737373737374 5 coding 1 1 1 1 0.0671439982470311 0.622288757015732 0.00218148080960281 0.979362502643197 ATGGAGGCGGAGGAGCCCCAGCATGGAGCCTCGACTCCCATCCCTGCCAGAGCAGAATTCCCTGTTATCTGGGCACCTCCCATGAGGAGCAGCAAGACCCCTGCCTTGGAGCCTGCAGCCGAAGAGGGTGAGGACCCGCGGTGTCAGTGGGCTGAGGGCTGCACACTCTTGGAGACCCAGCAGAGACACGTGAGGGATGCGAATGACCGTGCAGCTGAGAGAATGACCTCTCTCCTCAACGAAGCCTCTCCAGAGGTGGAGACCGACCAGGAAACCCTGATGGCTGAGGCCTGTGATGATACCCCCTCATGCCAGGAGGCCGGGCCCTGGAGCCTGGAAGATAGACAGGCAAGGACGCCAGCTTCCCTGGATTTCCTGACCTGCCCTGACCAGGGTGACTGTCTGGACACGGCCTCGGTATCCAGGGATCTGGACACCAGCGTGGAGGTGGACTTTAAACCAGAACTCACGTCTTTGATATTGGAAACGGGACAAGCAGAAGGGAAGGAGGAAACATCCTCCAACGCCTATGCCCGGACCAGACACAGGCCTTCCTGTGATGACGAGCACCCGGCTGAGACCAGCCGGCCCCTGGAGGACTCGGAGTGTGGACCTGCCAGGCAGGAAAGTCCAGGCCTCGTGTGTCTCCAGGGAACTGAGGGGCTGGAGGAAGGGGGACCTCAGGGAGAGGCTGCTGGCTCTGCTGGGCTTTCCGGGGCTCCAGAGCAGATGGGAGAGCAGGTTAAAGGTGCAGAGGAAGAAGGGAGACAGAAACAGCAGCAGATGCAAAATGACATGGTGCTTGAAGATCCAGGAGAAAGAGAGGGGTGGTGCTGCGGGGAGGAGTTGGGGGGTCTGAGTTATGGGGAGTGGGACTGGAGGACTTGGAGCCACGGGGATCCAGAACAAGGGGAGCAGAAAGGGAGGGAGTTAACAGGGCCAGAGGAGAATGAGGTGGGTGCTCAGGACGGGGAGAATCAAAGCTCAGCAAGTAAGTCAGAGAAAGGAAGTGGAAAGCCCGAAGATCCGGGTGCACAGTGGGAAGCCAAGGCAGCAGAGGGGCAGGAGGAGGAAGTGGGGTCACTGGAGGAGGAACCAGGGGGCGGGGAGGGGGACACACCCAGCCGAGGAGGAGAAGAGAGCTGCATAGAACAAGGAGAGCGTGAGGGTCCCACTGCGCTGGCTCTGGTCGCCCCTGAGGTCTCTCCTCCCCGTGACCTGTCTCTAGAGGCCTCTTCTCCCCTGAGCAGGATCCCGGGGACTCAAACAGAGCCTGGAGCCGAGGTTCCATCCCCCATAGCTCCGAGTCCTGCCCCAGAACCCACAGGATGCTCCCACCAGCCCTTTTCTTTACCTGGTTCCTGTCCTGCCGAGGAGTCCCTGGACCCAGAAACTGCTCATCGCCACCAGCAAGAGGGCTCTGAGCTGGGGCAGGAGACCGCACATGGCGTGGGGGCAGAGGTGGTCTCTGCCTACAGTCCCTCTGCGACCCCTCCAAGGAGCCCAGAGGCAGCTGCACCCAGTCCTCCTGAAGGGCCCCCTGGCACGGCTGCCACACCGATGGCCCGTCCCCTGGCTGCCTCTCCCAGGAGGGAGCCTCCTGTCCTTGCCTGTTCTCCAGAAACCTCCAGAGCCTCTTGCCCGACTGACAGTCCATCTCCCCATGGGGCTCCTAAGACTCCCCCAGCAGCCTGCTACGGCTTCCCCTTGGCGGGCCGGGCCAACCCCCCGGGGTCCCTGGGCAGCCCCACCGGAGCGGTCCAGCCCGTGAGGAGCAACTCCTTCCCTGGGTCTCATGGGACAGAGCCAGCCCCACACCTGGCGGGAATATCCCTGTCCTCCTCCCACTCAGAGTTGCCCCAGAGGCCTCCCAAACCTGTCATCTATGGCTCTGTGCTCCCAAGAAGGGGCAGGAGAACTGTAAGGGACTGTGCCATCATTCCGGAAGCCTCGAGTTCACCACCCACTCCGGGGCAGGACTTTGGAGAACTGGCTTCAAATCCAGCCACGGCCGGCAGCCCCCCTGACAGTCAGCCGTGGGGACCCACGAAGCACTGGGCCTTTGCCCCCGGGTCTCCTGCCTGTGGCTCCTCCCCAGCCCCTGCAGCCCCCATGGACCTGATGATCCATGAACCTCCGCCCCTGCCTCCCCTGGAGAGAAGGCACGTCCAGCCCTCCACGGTGGAGCCAGACGGCCATCCCCCTGCGGTGATCCCCATGCTGAAGCGGTACAGCCATCCTCCACCACTCACCCTGGGTCCAGGGCTCCACGGCCCCCCCAGGGTACCCCCAGCCCACATTCCTGACCCCTTGGTGGCGAGGGAGCACCGACCGCTGCCCTCCACGCCAGACGCGCCACCCCACACTCAGCACTCTGTCTCTTCCAGGCAGAGATACAACAAGCCGTTACCCCCCACCCCCGACGCCCCCCAGCCCCACCACCCCCTTGTCTTGTCGAGCATCTCAAGGATCTACAAGCCTCTCCCTCCTGTCCCTATCCTGGATTCTCCTACTGAACCACCCCCTCTGCCCCCAAAGTCCAAGGGGAAGGGCAGGAGCTCGCAGGGAGGACTCGTGAACTCAGGGGATCAAGGCAGGCCGAGGCCTGTTTGTCAAGAGTGGACCGTCTCCACCCCACCTTCTGCAGGACGGGTCTCCTGGCCTCCAGCCACAGGCCGGTCAACCGACCCTTTGGCTTCCGTCGGCAGGTGTAAGAGTGATACGCCCCCGGGCCTGGCTTTCAGTAACATGACGGCCCTTCTACACCCATCTTCCCCGACCACCCCGTGGACTCCAGAGGTCCAGCGACCCACCTCTGAACCCGGGCTCTCAGAAGAGTCTGAAGCCCCTGCCAGAGGGTCTTGGAGAAGAACAGCCCCCCAGGAAGGAAGCAATGGCCTGAGGAGGTCAGAGGTAGGCCCGGTGAGGCAGCCGGAGAAATCGGGCCACATCCTCCTGGAGAAGGCATCGAGCTGGCCCCATCGACGGGACCCGAGAAGGCCAGTGGAGGGCGGCAGTGAGGTGGCGGCGGTCCCCGGTGAAGGGTCGAGTAAGCACAAGGACTGGCACCGGCAGGGCCTGCGAAGACCCTCCATCCTCCCCGAGAGCCCTGTAGACACAAGAGGTCCCGCCATGGAAGGATCCCCTGGCCTGTCGGACGCCATTGTTTTCCGGGAGAAAAAGCCAAAGGAGGTGATGGGAAACTTTTCAAGACGGTGCTCCAAGCTTATCAACTCCTCTCAGCTGCTTTACCAGGAGTACAGTGATGTGTTTCTGAACAAGGAGATTCAGAGCCAGCAGCGGTTGGACAGCCTGACGGAATCACCGGGGCCCATCTCGCCCCGGCAGCCCCGAAAGGCCCTTGTCTCCTCGGAGTCCTACCTGCGTCGCCTCTCCATGGCCTCCAGCGGCTCCCTGTGGCAGGAGATCCCTGTGGTGCGCAATAGCACCGTGCTGCTCTCCATGACCCATGAAGACCAGAAGCTCCAGGAGGCCAAATTTGAGCTGATTGTGTCAGAGGCCTCCTACCTGCGCAGTTTGCATATAGCTGTGGATCACTTCCAACATTCAGAGCAGCTCCGGGCCACCCTTTCCAACCAGGATCACCAATGGCTCTTCTCTCGTTTGCAGGATGTGCGTGACGTCAGCACCATGTTCCTTTCTGACCTGGAAGAGAACTTTGAGAACAACATCTTCACCTTCCAAGTGTGTGATGTGGTCCTGAACCATGCCCCCAACTTCCGTCGGGTCTACCTGCCTTATGTCACCAACCAGACCTACCAGGAACGCACCTTCCAAAGCCTGCTGAACAGCAACAGCAGTTTCCGAGAGGTCCTGGAGAAGCTGGAGAGTGCCCCCATCTGCCAGCGCCTTTCCCTCAAGTCCTTCCTGATTCTGCCTTTCCAGCGCATCACCCGTCTCAAGCTCCTGCTCCAGAACATTCTGAAGAGAACACAGCCCGGCTCCGCAGAGGAAGCAGAGGCCACGAAAGCACACCATGCCCTGGAGGAGCTGATCCGAGACTGCAATAACAATGTCCAGAGGATGCGACGGACGGAGGAGCTGATCTACCTGAGCCAGAAGATTGAGTTTGAGTGCAAAATATTCCCGCTCATTTCACAATCGCGCTGGCTGGTGAAGAGTGGGGAGCTGACGGCCCTGGAGCTCAGCGTCTCCCAGGCGCTGCGGAGGAAGCTGACCACCCGCCCGGTCCACCTGCACCTCTTCAACGACTGTCTGTTGCTGTCTCGGCCCCGAGAGGGTAGCCGATTCCTGGTATTCGACCATGCTCCCTTCTCTGCCGTCCGTGGGGAAAAGTGTGAAATGAAGCTGCATGGAGCTCACAAAAACCTCTTCCGACTCTTCCTGCGGCGCAACGCCCAGGGCTCCCAGGCCGAGTTCCTCCTCCGCACAGAGACCCAAAGTGAAAAGCTTCGCTGGATCTCAGCCTTGGCTATGCCGAGGGAGGAGTTGGACCTTCTGGAGTGTTACGACTCCCCACAAGTGCAGTGCCTTAGAGCCTACAAACCCCGAGAGAATGACGAGTTGGCGCTCGAGAAGGCAGACGTGGTGATGGTGACCCAGCAGAGCAGTGATGGCTGGCTGGAAGGCGTGAGACTGTCCGATGGGGAGCAAGGCTGGTTCCCTCTACAACAAGTAGAGTTCATCTCCAACCCAGAGGTCCGCGCACGGAACCTGAAGGAAGCCCACCGAGTCAAGACTGCCAAGCTACAGCTGGTGGAGCAGCAGACCTAGCCGTTTTCTGGGAGGAAACCCCCGAGCTTAAGGACGAGATGTTCCTGGACAGGGCTGGCCCAGGACACGGTGGTGGAGGCCTTCTGTGCATCAGGAACTAGGCCTTCTAAAGCCCAAGGACAACACCCAGCTGCCAGGAGCTAGTCCCAAGCCTCCTCTTTTTTTGTGCTTTGTACTTGGTGCGGGGATTTTGAGGGACTTTGCACTGGACTCTGAGAACCTTTTCTCATAGAAAAAGGGATCCATGGGGCCTAAGCCAAGGAACTTTACTTCTCCTGCCCTGCAGCTAAACGCTTTCAGAGTACAGATTCAGAGCTGACCAGAGTTTCCGTCATGGCCGTATGTTAAACAGAATCTGGAGGGAGATGTTTAAGGAGGATGGACAAATCAGATGGGAGGGTTAACCCGGTGACCTTTTAAGGTATCTTCCAACCCTGGAGATATCCCGTAATTACTGGGCAAGGTCAGTGCCTGGGTCTCTGGGGTCTGTCGTCGGCTATGTGAGGTGATACGCTCTCACTCTAATAAAGTTGGCACTTCTCCGAGTGTTTTCTCCCCAG EMBV3_19057 CAAGGAGGACATGCAGTTCCAGCGTCAGGACGGCTTGGAGGCGCCGCTGAATGAAGCACA Gene GeneID:529463|BEST2:XM_002688761:70_cdna Constitutive 0 NULL GeneID:529463 7 GENE BEST2 NULL bestrophin 2 EMBV3_37664 CTGATCTTTATCGTCTTTGCCGTCCACTTCTACCGCTCACTGGTCAGCCATAAGACAGAC Gene GeneID:517688|ORAI1:NM_001099002:180_cdna Constitutive 0 NULL GeneID:517688 17 GENE ORAI1 MGC159526 ORAI calcium release-activated calcium modulator 1 EMBV3_29673 TGGTGCGCGAGATTGCGCAGGACTTCAAGACCGACTTGCGTTTCCAGAGCTCTGCGGTGA Gene GeneID:525511|LOC525511:XM_002697523:253_cdna Constitutive 0 NULL GeneID:525511 23 GENE LOC525511 NULL similar to histone cluster 1, H3f EMBV3_26028 GCAGACTGAAACTATGAAGAGAAGGGGAAGAAGATTTGAGGAAGCCCTGTGTCCCTGATG Gene GeneID:614947|LOH12CR1:NM_001076355:119_cdna Constitutive 0 NULL GeneID:614947 5 GENE LOH12CR1 MGC143364 loss of heterozygosity, 12, chromosomal region 1 EMBV3_35256 ACCGGCGGGTCTGTGGGGAGTTTTGGAATCTCAGAGGGCAACATAACTGGGAGGAAAAAT Gene BVV0102_044226 + 0 NULL GK000010.2:5048306-5069880 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016589 1 XLOC_008868 Coding TCONS_00016589 XLOC_008868 NonCoding Coding - 10:28299241-28301816 - TSS11531 2575 3 TCONS_00016589_4 77 0.995728155339806 1 0 0.000980013624823575 0.000727607492629448 0.000328294195561679 0.000113946935567276 0.000318280652777089 1.8995256704494e-09 0.000161929109284913 0.000259749321373824 0.000320869983101965 0 0 1.99632720207345e-09 0.000105857088244329 2.31002008087914e-05 5.05406544863529e-11 0 0 0 0.000159352050735431 3.75226833790463e-09 1.53006449414968e-09 3.72248869431522e-09 0 7.70579188423231e-09 0.000394613699449835 0.000214433908981667 7.36319495138392e-05 0 2.5682666993203e-09 2.85685821100524e-09 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 1e-49 203 70.10 0.184466019417476 0 noncoding 0 0 0 0 1.4735627545524 0.0968533308995735 -0.0274299135656947 0.604186624253747 TTGTTTGGTTTGGTGGGCTTTTATCCTGTTCCTTTACCTGCTGAATATTTCTCTGACTTTTCATCTTGTTTAGGTTGCTGTGTTTGGGGTGGCCTTTCTGTATGCTGGAAGTTTGTGGTTCCTTTTTATTGTGGAGGCTCCTCCCTGTGGGTGGGGTTGGACGAGTGACTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGCGTTGGTGCTCTGGTGGGTGGGCTGGATCTCTTCTCTCTGGAGTGCAATGAAGTGTCCAGTAGTGAGTTTTGAGATGTCTCTGGGTTTGGTGTGACTTTTGGCCACCTGTATATTTGTGCTCAGGGTTATGTTCCCGCTTTGTTGGAGAATTAGCTTGGTATGTTTTGCTCTGAAATTTGTTGGCTCTTGGGTGGAGCTTGGTTTCAGTGTAGGTATGGAGGCTTTTGGATGAGCTTTTGTCGATTAATGGTCCCTGGAGTCAGGAGATTTCTGGTGATTTCAAGTTTTGGTTTTAGGCCTTCTGCCCCTGGCTTTCAGTCTTATTTTTGTAGTAGCCTCAAGACCTCTCCATCCATATGGCACAGATGACAAACATCTAGGTTAATGGCGAAAAGATTCTCACAGTGAGGGACACCCAGAGAGGTTCACAGAGTTACATGAAGAAGAGAAGAGGGAGGAGGGAGATAGAACTGACCAGGAGGAGAAGAGGGGGAATCAAAAGGGGCGAGAGCAATCTAGCCAGTAATCAACTCCCTATTTGTGTACACAGTCTGGAACACTCAGAGAGGTTCACAGAGTTCCATAGAGAAGATAAAAGGGAGGAAGGAGATAGAGGTGACCAGGAGAAGAGGAGGGGGAGTCAAAAGGAGAGAGACCAATCTAGCCTGTGATCAGGTCCCTAAGTTTTCTCCACAGCCTGGAACACCCAAAGACACAAAGACACAAAAACACAGAGTTAAGTAGAGAAGAGAAGGGGGAGGGAGGAGATAGAGGTGACCTGGGGGAGAAAAATGAGAATCAAAAGGGGAGAGAGCAATCAAGCCAGTAATCACACTCCTAAGTAAAAATGGGTGCTGAAGATTGAATTCTTAAAGGTACAAAATTGATAACAAGTACCAAAAAGCAAAGATTAAAAATCTAGAGTAGAGGTTAGACATTCAAAAATACAATATTAAAAAAAAAACAAAATCGCAAAAGTTATATAAAAAATATGAAATTTCCTTTAAAAATATGGTCTTTTTTTTTCAAGGTAATAGGTTTTAAAAATGAAAATTAAAGGATTAATAAAGAACATAAAAATAAAAAATTATAATTGTAAAATATATCTAGGAATTTCTCTGGAGCTGTTGAGGACAGTGTGTGGTTAGTTAAGTTTCAGATAGTTCCTTGTTCCACCTTTTACTTCTTCTCAAGGTCTATAGATCCCTTCCAATGTAGTCAGTGTTAACTACAGGGTTTTAATCTGTTGCACCTGTCACTTCCAGAGCTGTTCCCTCTTCTTTGTTTATTTTGGCTTCCTCTGTTTGCAAGTCTCTTCAGTATCTAACTTCCACCCTGACACAAAGGGGCAAAGGTGGTCATTTATTTAGGCTCACTTGTTCAATTGTGCTGCGGGGAGGGAGGAACACTGCATACAATTATCACTTGCGTATGTGGGGAGTGCTCACAGTGTCTGGGTCACACTGGGTTTGCTCCCACTCACGGAGGTTGTGTTTCCTGGTCTACACTGCTTAGGCTTCAGGTTGCTCTGCTGAGGACTGTCTGAAGCGGCCCTGGGTTGTGTGCATTTCTCAGATCTATGCTGCTCAGGTTCAGGTTCTCGGGTACTCCACAAAGGCACAGACTCAGTTGGGCCTGCGTTTTGTGCTTCCCAGGCCCAAGCAGCTCAGGGGATCAAGTGCTTGGCGAGCGCACATTCCACAGGTGAGGTGCATCTTATCAACTTCTCGGTCCCAGCCGCTTGGTTTCCTGGGTGCGCAGCTGCGTCTCAGGTGTGCCGTGTGTCTCTTGTGGGGAGCTGATCTCTGGCTGCGACCCTCCTAACGGATGTCAACCGTCCAGGATCCCCAGAAGACTTGGTTAGTGACTGAGAGCCTGCTTGCCGTTTGGTAGGGGATGCCGTCTCTGGGGCAGAGTTTGCCCCTTTCCTTCCAGCTCTGGCTGGCGCCCGCCTGCCTCTCCGCCTTCATTCGCTCAGTCCTTTGTTCTGTGGTCGGGTCAGGCAGTGCCTTAGGTTAGAGCCTTTCACGGGTAAATTCTCTCTCTTTCCTCTCTTTTTTTTTTTCCCCCTCTCTGGCTATCCCATGGTTCGTTAGCTCCCTCAGATTGCCTCAGGGCATTCAGAACCAGTCCGTACCCTAAAAGTGCAGCCCCCGCCTCCCTGTTCAGCCCCTGCTTGCTGGTGGAGGAGGCGAGCATCTGGGCTACTTCTCCTTTAGGAGTTGTAGTTGGACCTGTAATCTGTGGGTTTAATTTATTCATTTTTTCCTCCCAGTTATGTTGCCCTCTGAGATTCCAAAACTCCCCACAGACCCGCCGGTGAGAGGGTCTCCTGGTGTTTGGAAACTTCTCTTTTAAGACTCCTTCCCTGGGAC TCONS_00016586 s 5' 15208 TCONS_00016586 s 5' 17782 EMBV3_33969 TGCATCTAGAAAGCAGACCCCACGAGCTGCAACCAGAGGAAGCCCACATACGGCGACAAA Gene BVT0102_413560 + 0 NULL GK000021.2:14562830-14630025 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122743 1 XLOC_074298 NonCoding TCONS_00122743 XLOC_074298 NonCoding NonCoding - 21:14612335-14613192 - TSS91502 857 2 TCONS_00122743_2 68 0.446907817969662 1 0 7.93798501452995e-05 0.000211052429658136 9.71830964262705e-05 0 1.15219999338457e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00023428928837053 0 0 0 0 0 4.04228722158015e-05 3.28843406141082e-05 1.36736268135027e-05 0 0 0 XR_236347.1 LOC101907662 PREDICTED: Bos taurus uncharacterized LOC101907662 (LOC101907662), 9e-20 102 70.98 0.288214702450408 0 noncoding TTTTCGTATTAATAAGAGCTGCCATGGATTGAATATCTGACACTTGATGTATCTATCTATATAAAAGCCTCCAGCACAGAACTGGGCAAACTGCAGACAGCACTTGGGAGTGGGAGCCCAGCTCTGCCTACCAAGCCAAAGAATGTGAGAGCCATGATCTTCAAGAATGCTCCACTTCTGCTGTTAGTCTGAGGCATTTCACCCAAAGAGCCAAGTTTAAAAGCTAAAATGTCAGCACCAGTTTCTTAATTTCAACTCTAGAAAACTTACAGAGTAAGTGCATGATAAGAGAGTTTAAAAACAGCACTTTCTTTTTCTGAAGATAAAATAATAACTATTGACAGGCAGATAAAAATGAGAGTTAGGTACACATTCTGAGCTCAGGTCCACCACTTCCTAACAGTGAGAAAGGGGCCAAGTGACCTTTTGTTTTTTTAAACAGTAACCCTTTTTTCCTTAAACGTATATATATAATTTATTTTGGCTGTGCTGGGTCTTCACTGCTGCAAGTGGCCTTTTTCTGTAGTTGCAGAGAGTGGGCTACTCTCGGAGTGTGCCGGCTTCTCATTGCAGTGGCTTCTCTGTGTTTTTTAAAATTTCTATTAATTTTTCATTTATTTATATTGTGGCTGCGCTGGGTCTTTGTCGCCGTATGTGGGCTTCCTCTGGTTGCAGCTCGCGGGGTCTGCTTTCTAGATGCAGAGCTCGGGCTTCTCACTGCAGGGCTTTTCTTTTGGAGCCGGGACTTGGGGCGCAGGGAGGCGCAGTAGGCGCGGTGCACGGGCTCAGCTGCTCTGCGGCATGTGGGTTCTTCCCGGAGCAGGGATCAGATCCATGCCCCCTGCGTTGGCAGGCAG TCONS_00118682 . 5' 76771 TCONS_00118682 . 5' 76771 EMBV3_19082 CAAGCCTGGGCCTGGGTGATGTTGGGGATTGGTAATTGGATATGGGACTTACATGACTTG Gene BVT0102_126913 + 0 NULL GK000014.2:57216590-57239785 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02914 GGGTTTATTTGGCAACTCAGGGAGTCAACCCCAAGGAACATCCAGTAAAGCAGGAACTGG Gene GeneID:506667|C1D:NM_001037448:29_cdna Constitutive 0 NULL GeneID:506667 11 GENE C1D MGC133553 C1D nuclear receptor co-repressor EMBV3_26417 CAGACCCAGGGTGGCTGAGGCATTGCGAGCCCACGCCAGTGTTATTTGTTTGCACCCTCC Gene BVV0102_311469 + 1 EMBV3_06415 GK000023.2:25656503-25855144 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135686 1 XLOC_081909 NonCoding TCONS_00135686 XLOC_081909 NonCoding NonCoding - 23:5564452-5565064 - TSS100976 612 1 TCONS_00135686_1 61 0.998366013071895 1 0 3.03831961022256e-05 3.59015673730887e-05 2.29804137221016e-05 1.01766610698049e-05 3.70362432715272e-05 5.07661964340341e-06 1.10758368817426e-05 5.7040489206824e-05 3.38327682501454e-05 2.20891003202813e-05 2.96715970182216e-05 2.85106052243578e-05 1.82065087110459e-05 0.000683293584126459 9.27953894208531e-05 0.000584880953117464 0.000292600602475138 0.000160776416245991 3.38961852954374e-05 3.65578386659693e-06 1.30267813592569e-05 0.000211907639687618 0.000280607942807698 0.000403316711025548 8.66232163503816e-06 1.60981087558788e-05 7.87532599931056e-06 7.76334666729857e-05 0.000154742527664633 9.01271066425861e-05 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 3e-18 96.9 82.29 0.155228758169935 0 noncoding 1 1 1 1 0.0625517282911949 0.738322173835902 0.00242228869859032 0.963275449168336 TGTGGGTGTTGTGGGTTCAGTTCATTTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCCGTAGTAACCACAGGATTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCCGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGGGAGGGAGGGAGGGTGCAAACAAATAACACTGGCCTGGGCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCGCTCACAGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAGAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTACTCTTCCCAGGTCCGAGCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCG TCONS_00133796 . 5' 86657 TCONS_00133796 . 5' 86657 EMBV3_23042 ACTTCTGGTGATTGTCCGTCACCTGAGGATGCGCCCAAAGACCGCGCCGCTCCTGTTACA Variant GeneID:508805|GOLGA2:XM_002691631:319_cdna 547^627 1 EMBV3_11136 GeneID:508805 11 GENE GOLGA2 NULL golgi autoantigen, golgin subfamily a, 2 EMBV3_39813 AGAGTCTGGTTTAGGCTGTTGAATTGAGGTTTCGGTGAGGGATAGAGTCGCCAGAGCACC Gene GeneID:789539|KCTD2:XM_002696210:263_cdna Constitutive 0 NULL GeneID:789539 19 GENE KCTD2 NULL potassium channel tetramerisation domain containing 2 EMBV3_39578 AGGGTCAGAACGAAGGCCCCTGTGTCCTCCTGCGGCCCCATCAGTTCACAGAGTGGAGGA Gene BVT0102_424314 + 1 EMBV3_26753 GK000003.2:120325133-120330695 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22997 GCAGTTTTCCTGTAATGGTAATGGTGTTGCTGCCGTCCTGAGCCCATTTGTACTGAAGCA Gene GeneID:615978|CHST2:NM_001113769:72_cdna UTR3_Alt 1 NULL GeneID:615978 1 GENE CHST2 NULL carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 EMBV3_04770 GAACAGATTCACTTGTAAATGGGTAGAGCCACAGAGGGCAGAGACTTAACCAAAGTGCTC Gene GeneID:785768|RANBP2:XM_002691336:502_cdna UTR3_Alt 2 NULL GeneID:785768 11 GENE RANBP2 NULL RAN binding protein 2 EMBV3_39463 AGCTCAGTGAAGCAGACTCATTCTAAATTGCCAGGCCCTAACTTGCAGGCTGACTTCTGC Gene GeneID:539807|ZNFX1:XM_002692498:610_cdna Constitutive 2 NULL GeneID:539807 13 GENE ZNFX1 NULL zinc finger, NFX1-type containing 1 EMBV3_04641 ACTGGATCCTCTTTGTTCTTCACCGAGAATCAGGAGACTGAATGCATGGAGTGTAGCTGC Gene BVT0102_121400 + 0 NULL GK000014.2:28995759-29385707 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26525 ATAACAGCAACGGCATCTTACACATCTTGGGAAGAAACGAGAGAATCAAGCCTCGCCCGG Gene GeneID:619140|LOC619140:XM_002693425:38_cdna Constitutive 0 NULL GeneID:619140 15 GENE LOC619140 NULL similar to hCG1991759 EMBV3_23651 CTGAGCATGATGGGATGCCCACTTCATTTTACAGTAGCCTTGGTTTCTGCTCTCCTTGGC Gene GeneID:100335300|LOC100335300:XM_002684939:108_cdna Constitutive 0 NULL GeneID:100335300 1 GENE LOC100335300 NULL hypothetical protein LOC100335300 EMBV3_29941 GAGAGGGTGTTTCCGAATGTGGTCTGAAGCTCTGGCTGCCTTTTGATTTGGGGGAACAGA Gene GeneID:504288|AKAP13:XM_002696531:169_cdna Constitutive 0 NULL GeneID:504288 21 GENE AKAP13 NULL A kinase (PRKA) anchor protein 13 EMBV3_02868 CACAATGTCTTGGTTGTAGAGGGGGCTCGAAAGTACGCCTGCAAAATCTGCTGCAAGACT Gene GeneID:518910|ZBTB5:NM_001077937:10_cdna Constitutive 0 NULL GeneID:518910 8 GENE ZBTB5 MGC142522 zinc finger and BTB domain containing 5 EMBV3_36961 CCCGGCGTTCTCCGAACTTCAGTCCATGTAACCTGTAAGCCACAGACATCTTGGACAGTT Gene BVT0102_303484 + 0 NULL GK000008.2:28804607-28844611 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227244 TCONS_00227245 TCONS_00227248 TCONS_00227250 TCONS_00227246 TCONS_00227251 1 XLOC_138201 Coding TCONS_00227248 XLOC_138201 Coding Coding C8H9orf93 8:28485573-28822918 = TSS169705 4268 1 TCONS_00227248_4 1334 26 0.987425298804781 0.00234059495355897 0.00106930662325536 0.00062358240373206 0.00026273543557597 0.000251909685416227 5.6712883897241e-05 0.000334245508096214 0.000421165770326578 0.000896197163580035 0.000383457142576447 1.12612025553303e-05 1.93286369660268e-06 1.48187299420087e-07 0.000121003873598786 0.000219091656618808 7.03648829368114e-21 2.74707695517021e-11 0 0.000120858863309204 0.000626003687907415 2.83863323538453e-05 0.000194522096046988 5.56763306013871e-06 6.15928746223612e-15 0.00128104746915246 0.000812057511922737 0.000565847163782358 1.06461864144996e-239 7.4353694147985e-05 0.000210482800287473 XM_003586376.2 CCDC171 PREDICTED: Bos taurus coiled-coil domain containing 171 (CCDC171), 0.0 7658 100.00 0.994611059044049 XM_005251397.1 CCDC171 PREDICTED: Homo sapiens coiled-coil domain containing 171 (CCDC171), transcript variant X1, mRNA. 0.0 6006 91.32 0.999765698219306 TCONS_00227248_4 sp|Q6TFL3|CC171_HUMAN CC171_HUMAN Coiled-coil domain-containing protein 171; 0.0 2453 90.71 0.999250374812594 0 coding 0 0 0 0 -0.0243025876527144 0.927190636614445 0.083496386930856 0.133415678164566 AGCAACAGCGCATGCGCCGGTTGCCTTCCAGCGAGGCCGCGCAACTCCGCGGGCCCGGATCTTCCAATCCGAGCCCGGCGTTCTCCGAACTTCAGTCCATGTAACCTGTAAGCCACAGACATCTTGGACAGTTTAAATCATCAGTAACGAAGTATATCATTAAGCAACAGTGGGATATTTTGAAAGAATTGGAAGACTTGTCATGAATTCAAACACTTCGAGTAATACCCCTGGTGATATCCAGAGGTTGAAGAATGCCTCATCTGATATAAAACAAATAGTTAAAAGTGAAACAGACTTGGATATTACTGCTGATCTCAGAAAGAAACTCCATCGGGCTAAGAAAGAAAAATTAGAAATAACAACTAAGCACAATGCAGAGCTGGCAAGCTATGAGAGCCAGATTGCCAAGCTGCGATCCGAGGTTGAAAAAGGAGAGGCATTGCGACAAAGTCTGGAGTATGACCTGGCTGTTGCTAGAAAGGAAGCTGGACTCGGAAGACGGGCTGCTGAAGAAAGGCTAGCTGAGGCACACAGGATACAAGAAAAACTCTGTGCTCAGAATGTAGAACTTCAGGGAAAGGCAAATGAGATCGAGAAAGCATTCCAGATTTCCCAGCAGAAATGGAAAGAAGAGTGCAGAAGATTTGAACATGATTTGGAAGAAAGGGACAATATAATTCAAAATTGCCATCAGGAATATGATTTACTTACGAAAGAAAAAAGCAGACTAGAGAAAACTCTACAGGAAGCGTTGGAAAAACATCAGGAGGAGAAGAATGAGATGGAGTCTCATATCAGAGAGACAGCATTGGAGGAGCTTAGATTACAAGCAGAACAATGGGAAGCAGAGAGAAGAGAGTTACAATTTATAGTCCAGGAGCAAGATAATGCTGTACAAAATATGCACAAGAAAGTGGAAAAATTAGAAGCTGAACACATGGAGTGCTCTGACCTTTTACGGCGACAAACAAGTGAACTTGAATTTAGTACTCAACGAGAGGAACGTCTTAGAAAAGAGTTTGAGGCAACTACTCTGAGAGTGAGGAAATTAGAAGAAAATATTGAAGCAGAAAGAGCAGCACATTTGGAATCCAAATTTAATTCTGAAATTATTCAGTTACGGATTCGAGACCTTGAAGGAGCTTTGCAGGTAGAGAAGGCCAGCCAAGCAGAAGCTGTTGCCGATTTGGAAATGATCAAGAATGAATTCAAAGAAGTTGAAAGTGCATATGAGCGAGAAAAGCATAATGCACAGGAGAGCTTTGCAAAACTAAACGTATTAGAAAGAGAGTATTTCTCCAAAAACAAGAAACTCAATGAAGAAATTGAGGAACAGAAGAAAGTAATTCTAGACCTTTCAAAGAGACTCCAGTATAATGAGAAAAGTTGCAGTGAATTACAGGAAGAACTTGTAATGGCTAAGAAGCACCAGGCTTTTCTAGTGGAGACATGTGAAAATAACGTGAAAGAATTGGAATCGATCCTGGACAGCTTTTCTGTGTCGGGCCAGTGGACATCAGGCATCCACAAGGACAAAGATAAACCCCCGAGCTTCTCTGTTGTCCTTGAGACTCTGAGACGCACCTTGACAGATTACCAGAACAAGCTGGAAGAGGCATCTAATGAGCTAAGCAACATGAATAATGCTAAGGAAAAGGCATCGAATGAGCTTGACTCTACCAAACAGAAGATAGAATCTCACACTAAAAATATAAAGGATCTTCAGGATAAGCTGGCAGATGTCAGTAAGGAGTTAAGTCATTTACGCACTAAATGTGCAGACAGAGAGGCTCTAATAAACACTCTGAAAGTGGAACTGCAGAATGTGCTGCACTGTTGGGAGAAAGAAAAGGCGCGAGCAGCCCAATCTGAGAGTGAACTTGAGAAGCTTTCCCAGGCTTTCCATAAGGATGCTGAGGAGAAGCTAACCTTCCTTCATACCTTGTATCAGCACTTGATAGCAGGCTCTGTGCTCATAAAACAACCAGAAGGCATGCTGGATAAATTCTCTTGGCCTGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGCCCTGATCGTAGACCTCAACAGGGCTAATGAGAAGATAAGTCATCTAGAGTATATCTGTAAAAACAAGTCCGATACGATGAAAGAGCTTCAGCAAACCCAGGAAGACACCTTTAACAAAGTGGCAGAGCAGATCAAAGCACAAGAGAGCTGCTGGCACAAACAAAAGAAGGAACTGGAGCTGCAGTACTCTGAACTCCTCCTGGAGGTACAGAAGAGGGCACAGAAATTTCAAGAAATTGCTGAAAAAAATATGGAAAAATTGAACCGTATTGAGAAGTCACACGAACAATTGGTGTTTGAAAATTCCCACTTCAAAAACTTGTTATCCCAGACCAAAAGGGAAAAGACCTCCTTGCTGGTAGCCTGTGCATTGATGGCTGGCGCCTTCTATCCTCTCTACAGCCGATCATCTGCCTTATCTACACAGAGAGATTTTCTCCAGGAGCAGGTCAACACCTTTGAGTTGTTAAAATTGGAAGTTAGAACTCTAGCCCAGGCTTTGTCAACAGTAGAAGAAAAGAAGCAAGAGGAAGCCAAGATGAAGAAAAAAACATTCAAAGGATTGATACGTGTATTCCGGAAAGGTGTTATTGCAATTTTGGCAGCAAACAGACTCAAGATTTTGGGCCAGTCGTGTGTCTCTCTTTTTACCTGGATGGAGAGTTTCAGAGAAGGCATAGGCGTGTTAGTGTGTACAGGAGAGCTCAAAGACAAGCATAAATTTCCAAAACATCAAAAGGAGCAGTTACGTTGTTTGCAAGCTCTCAGTTGGCTCACCAGTACTGACCTTCTTGTTGCAATAATCAGTTCCATGGCTGAAGTACAGGAAGCTATTAGTAAAACAGATCCAAATTCCAGAATTTGTGGGCATTTACTTATAGGGGCAGCCAAGAATTCTTTCGCAAAACTCATGGATAAAATTAGTCTGGCAATGGACACTATGCCTTTGCACAACAACAGGAGCATTACATATGTAGAAAAAGACTCCCTGGTTCAGAGGCTGGCCCGTGGACTTCATAAAGTAAACACATTGGCCCTGAAATATGGTCTGCAAGGCCATGTGCCCATTTTGAAAAGCACAGCATCATTACAGAAGCAAATATTTGGATTCACACAAAGGCTGCATGCAGCAGAAGTGGAGCGTCGCTCACTGCGCTTAGAGGTCACAGAACTGAAACGGAATCTGAATGAAATGAAGAAGGAGCTTGACAAAACCCAGGGTCTCCAAATGCAATTAAATGAATTTAAGCAGTCTAAATTGATCACCCATGAGAAGTTTGAAAGTGCATGTGAAGAGCTGAATAATGCGTTACTTCGGGAACAGCAGGCTCAAATGCTACTGAATGAGCAGGCACAGCAACTACAGGAGTTGAATTATAGACTTGAATTACATTCCAGTGAGGAAGCTGACAAAAACCAAACTCTTGGAGAAGCTGTGAAGAGTCTCTCCGAGGCAAAGATGGAGCTGAGAAGAAAAGATCAATCTCTGCGTCAGCTCAATAGACATCTTACCCAGCTGGAGCAGGACAAGCGTCGACTGGAGGAGAACATCCATGATGCAGAGAGTGCCCTCCGCATGGCAGCCAAAGACAAAGAATGTGTTGCTAATCATATGAGAACAGTGGAAAATATGCTTCATAAGGTCAGAGATCAGATCTCGCTGTCACGGACTGCGGCAAGTAGGAATGACTTCACCCTGCAGCTACCCAGACTGCACCTGGAGACCTTTGCAATGGAGGGGCTCAAGGGCGGGCCAGAGGTTGTAGCGTGCCAGGCTATGATTAAAAGTTTCGTGGATGTCTACCAGCTTGCAAGCGCTAGAATTGCTACATTAGAAAAGGAAATGACATCTCATCGAAGTCACATTGCAACCTTGAAATCAGAACTTCACACGGCTTGTTTACGTGAAAATGCAAGTTTACAATCAACAGGATCACGAGACCACTCAAATTTCTCCATTCCTTCGAGAGCTGCTCTTCCTGCTGACACAACTGATGTTGGGGATTTTTTGCCGTTGAAAGCTGAACTTGACACAACTTACACTTTCTTAAAGGAAACACTTATAAATTCTGTGCCCCTGGCATCATCATCTAACTCGTCTCCAGTGACAATGTCTGCTACTGCCAAGCGACCAGCTCAGATTGGTTTATGACTTTATGAAATAAAAAGCATGCAGGAAGAGTTAACAGTACAATTAAAATTGTTTTGATGGG EMBV3_09928 AAGGAGATGTTTCCTCGCTCCTTCATCAAACTGCTGCGCTCCAAGGTGTCCCGATTCCTG Gene GeneID:523518|SCUBE1:XM_002687973:104_cdna Constitutive 0 NULL GeneID:523518 5 GENE SCUBE1 NULL signal peptide, CUB domain, EGF-like 1 EMBV3_40666 CACTGGCTGCTTTTGGTCCCCATAGATGGAGTAGTTGAAATCTGTAGGAATGGACCTCTG Gene GeneID:777773|ARL6IP1:NM_001078157:16_cdna UTR3_Alt 2 NULL GeneID:777773 25 GENE ARL6IP1 MGC139614 ADP-ribosylation factor-like 6 interacting protein 1 EMBV3_26286 ACAGAATGCTGGAAAACCAATCAGAATCCCTGAATGATGAGGGTGGTAGATGGTCAAGAG Gene GeneID:541084|MBD5:XM_002685365:262_cdna Constitutive 0 NULL GeneID:541084 2 GENE MBD5 NULL methyl-CpG binding domain protein 5 EMBV3_14624 AGGAGCAGAGAGTCCCATAGCTGTCCTGAGACACCGTCACCAGTCAGATCACGAATGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37868 AAGTGCTGGAGGAGAAGACCAGCAGTGAGAAGCACAGAGTGGTGTTACGACGGTGGAAAA Gene GeneID:613695|C9H6ORF203:NM_001102267:62_cdna Constitutive 3 NULL GeneID:613695 9 GENE C9H6ORF203 MGC151851 chromosome 6 open reading frame 203 ortholog EMBV3_35035 CTAGTTTCCTGCTCTGAGGTTTGGCTGGTGGGGAGACCGAGAGTGAAGGTCTGTGAAATA Gene GeneID:615289|ABHD14B:NM_001105441:298_cdna Constitutive 0 NULL GeneID:615289 22 GENE ABHD14B MGC155104 abhydrolase domain containing 14B EMBV3_15529 TTCCTTGCTGGTCCAGTGGTTATGAATCCACCTGCCAATGCAGAGGACATGGATTCGATC Gene BVV0102_052608 + 1 EMBV3_21014 GK000029.2:44170097-44189277 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12115 ACGATCTCCACCAGTTACTCATCGTAGCTCGGTTTCTGTCTCTCAGTGCTGGTCAGACAA Gene GeneID:514863|C26H10ORF119:NM_001098974:17_cdna Constitutive 0 NULL GeneID:514863 26 GENE C26H10ORF119 MGC159792 chromosome 10 open reading frame 119 ortholog EMBV3_02577 CTCATAGAAGCTGGGTCCATGTGTAAGCATGTCGTGTATGCGTGTGAGCTTGCATGGAGG Gene GeneID:100337091|LOC100337091:XR_083911:120_cdna Constitutive 0 NULL GeneID:100337091 18 PSEUDO LOC100337091 NULL 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2-like EMBV3_14722 GGTTTCCTGATTAAAAATTCATGACTGAGATCCTATCTGGTTATATGAATGAAAGGAAGG Gene GeneID:286813|TTPA:XM_002692689:82_cdna Constitutive 0 NULL GeneID:286813 14 GENE TTPA NULL tocopherol (alpha) transfer protein EMBV3_16906 TTTGGTCTTGCCTTAGCCGTTGCAGGAGGCGTGGCTCAGCAGGAAGCAGAGAGGGCCAGA Variant GeneID:530409|PHB:NM_001034572:120_cdna 137^634 1 EMBV3_24993 GeneID:530409 19 GENE PHB MGC127238 prohibitin EMBV3_22398 CCAACCTGATGGGTCCAGAAACTCTGAAAGGACATTGCTGGACGGTTCCTGGCTCAGAAG Variant GeneID:618673|KIAA1984:NM_001035502:47_cdna 897^997 1 EMBV3_38546 GeneID:618673 11 GENE KIAA1984 MGC134332 KIAA1984 EMBV3_30923 CTTGGACCGCTGCTTTCAGGAGATGTTGGACGAGGAAGACCAAGACTGGTTTATTCCATC Gene GeneID:789468|LOC789468:XM_002691227:72_cdna Constitutive 0 NULL GeneID:789468 11 GENE LOC789468 NULL similar to KIAA1155 protein EMBV3_02747 CAGGGGGTGGTGATCCGTACTTGGATGATATTGATGATGAGATGGACCCAGAGATAGAAG Gene GeneID:510246|PAIP1:NM_001104971:5_cdna Constitutive 0 NULL GeneID:510246 20 GENE PAIP1 MGC160051 poly(A) binding protein interacting protein 1 EMBV3_31169 GGAAGAAAAAAAAGGCAGCCTGTTCTTTCTGCTTTTATTGTATTAACAGCTGAGGTTAGC Gene GeneID:525346|NCOA1:XM_002691465:323_cdna Constitutive 3 NULL GeneID:525346 11 GENE NCOA1 NULL nuclear receptor coactivator 1 EMBV3_03224 TCTTTGGACTCATCTACCGACCCAGGGACTTCGCTTCCTACATGCTGGGCATCTTCATCT Gene GeneID:508259|SIDT1:XM_002684776:297_cdna Constitutive 0 NULL GeneID:508259 1 GENE SIDT1 NULL SID1 transmembrane family, member 1 EMBV3_29130 AGGCGTGGGGGTGGTTACCTTTTAGGGTCCAGGGTAATCTTTGCAACATCCTCAGCTTGT Gene BVV0102_170772 + 0 NULL GK000022.2:49386859-49499797 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38958 CCTGGCTATAATTCACTGATCACGTGGATATCATGCACTGATTACGTGTCTGTCATGCAC Gene BVT0102_138128 - 1 EMBV3_07186 GK000017.2:188204-277494 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39818 CATGCCAGAGACTATATGGGCAGGTCTTAGAGTATAGTGACCTGGAAGGCTCAAAAGACC Gene BVV0101_014441 + 0 NULL GK000002.2:125481812-125507618 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106584 TCONS_00106583 1 XLOC_062839 NonCoding TCONS_00106584 XLOC_062839 NonCoding NonCoding SNHG3 2:125499121-125501522 = TSS78421 642 1 TCONS_00106584_1 44 0.191588785046729 3 0.73375 0.000169540761317229 0.000486626331202278 0.000582097960837363 2.83808523084405e-10 0.000216304070677696 0.000507027629890451 0.000134511377676488 0.000719268760001851 0.000289466240335962 0.00443635961181485 0.00242417198806474 0.0039314497313036 0.000929108598853152 0.00628808544437098 0.00535577878465116 0.00972113056202322 0.00974485719906775 0.0109619719994051 0.000115774017640942 0.000101313168996491 1.46154461346195e-05 0.0116056119002083 0.00641093385237507 0.0128776545842809 4.54594433120121e-05 4.59086959769467e-05 0.000280721023897095 0.00303304438136121 0.00211593076400488 0.00593342329698373 NR_036663.1 SNHG3 Bos taurus small nucleolar RNA host gene 3 (non-protein coding) (SNHG3), non-coding RNA. 0.0 1150 100.00 0.990654205607477 0 noncoding 0 0 0 1 -0.767696785274236 0.0196220736490925 0.362724889493427 0.00623900222277597 TTTGCAGCATTTTGTTTGGGATTCCAAATACAACTGGATTTGAGCATTTTGTTTGGGATTCCAAATACAACTGGATTTGAGGAGAGAAGAGGAGCCTCACCGACTTCGCAGTTAGCAATGCTTTGGAGTCTTTCTTTGACAGGGAAATTAGTAAAGTAAAAATTAACTCCAGGCAAAACTACTGGAGTGGAACCCATTCCTTTCTCCATGGGGATCTTCCTGACCCAGGGATTGAACCTAGATCCTACTGCATTGCAGGTAGATTCTTTACATTCTGAAACACCAAGTAAAATGAGTAATACATTCATTGAAGATAGGCCTGGGAGATTTGGAAGTGTATAGATACAATATTTAACCCCTGGAACTACACCTTAAAACCCATGAGTTCTACTGTTCTGAAATTTATAAGACATGCCAGAGACTATATGGGCAGGTCTTAGAGTATAGTGACCTGGAAGGCTCAAAAGACCTTTTCAGGTTTCCTATCTGGTGAAAACTTGATGTAATGACACTAAGATATTGACCTCTTTATCTATCACTCTTAAAAGTGGAAAGCAGGTGCCCATGAGAATCAGCATGTCTTAAAGAAATCCATCAATTTCTAATGTAATCGTGAACTTTAATAAAGATGACTATATGTGT EMBV3_16471 GCCAATACTTTGCAACCTTAACATTCCTCCTTCCAGTTGTGGGTCCTTCAGACCATAGGT Gene BVV0101_058394 - 1 EMBV3_27228 GK000004.2:82024335-82104332 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24824 GGTGATAATGTGTATGTCTGGCTTCAGAAGAAGCTGGTGCAATGGTGGACATGGCTCAGG Gene BVT0101_014599 + 1 EMBV3_05232 GK000014.2:68343023-68377529 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08520 CTCATTATCCTGAGACAAAGTAATACTGGACCTGCACAGTGTTGGTGCCTGGCTTCTACC Gene BVV0102_162913 + 0 NULL GK000015.2:44472127-44500977 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21324 TCCTGGGCTTGAGGCAGGAAGAGGAGGAAAATCTCATCACAGGAGTCACAACAGACACTG Gene GeneID:789346|LOC789346:XR_083957:98_cdna Constitutive 0 NULL GeneID:789346 18 PSEUDO LOC789346 NULL similar to 60S acidic ribosomal protein P1 EMBV3_08703 CTGACAGCCCAGGATTTTAAACCGCTTCCTTGCCTGATCCACCCCTCTTTTTGAGCATCC Gene BVV0102_017118 + 0 NULL GK000013.2:51842050-51853964 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045409 TCONS_00045414 TCONS_00045415 TCONS_00045408 TCONS_00045411 TCONS_00045417 TCONS_00045416 TCONS_00045412 TCONS_00045410 TCONS_00045413 1 XLOC_026432 Coding TCONS_00045409 XLOC_026432 Coding Coding CDC25B 13:51851552-51859769 j TSS33144 4784 1 TCONS_00045409_3 348 0.0451505016722408 12 0.419182083739046 0.000140593513039273 0.000342042072416203 5.79774384116856e-05 0.000373917549946399 0.000336261433817615 6.47374666940883e-18 7.52074200973422e-05 0.000274246399398323 0.000387915733989325 2.63909078795148e-47 3.12482653849528e-05 2.10086344140902e-13 3.45117098880473e-05 0.000300188329914183 0.000133026918847923 3.94772542175476e-06 6.15293507298383e-13 1.0279093960265e-12 0.000501155252165622 0.000653226491787391 0.000388441802679716 5.25800154932874e-08 3.55377880344279e-14 2.85110481112917e-11 0.000811378984739486 0.00124842484123448 0.000420976797752901 5.32067511959328e-10 4.35600741555043e-06 3.63754277657457e-14 XM_005214565.1 CDC25B PREDICTED: Bos taurus cell division cycle 25 homolog B (S. pombe) (CDC25B), transcript variant X1, mRNA. 0.0 2765 100.00 0.320234113712375 NM_004358.3 CDC25B Homo sapiens cell division cycle 25B (CDC25B), transcript variant 0.0 973 85.94 0.174958193979933 TCONS_00045409_3 sp|P30305|MPIP2_HUMAN MPIP2_HUMAN M-phase inducer phosphatase 2; 0.0 596 80.31 0.997126436781609 1 coding 0 0 0 0 -0.0336615799080933 0.854183012426422 -0.0238430069697289 0.686010112218897 AGTGAGCAGTTTGCCATCCGACGTTTCCAGTCCTTGCCGGGGAGGCTTCTGGGCCACAGTCCTGTGCTACGGAACATCACCAACTCCCAAGCGTCTGGCACCTGGAGGAAGACTGAGGCGTGTGACCAAGCTGCCCACGGCTCTGGGGAGGACAAAGAGAATGATGGATTTGTCTTCAAGATGCCAGGGAAACTCAAACATCCCAGCCACTCCCGTGCTCTTGGGGAGTGGGCCAGCCGCAGAGAAGCCTTTGCCCAGAGGCCAAGCTCGGCTCCCGACCTGATGTGTCTCACCCCTGAGCGGAAGATGGAAGTCGAGGAACTGATCCCCCTGGCCCGATGCCAGTTCTCCGTGACCCCCTCCACAGGGGCTGTTGAGGAAGACGATGGATTCGTGGATATCCTGGAGACGGACTTAAAGGAAAATGATGTAGTTCCCCCAGGCATGGAGAGCCTCATTAGTGCCCCACTGGTCAAGACCTCAGAAAAGGAAGAGGAACAGGACCTCATCATGTACAGCAAGTGCCAGCGGCTCTTCCGCTCTCCGTCCATGCCCTGCGGTGTGATCCGGCCCATCCTCAAGAGGCTGGAGCGCCCGCAGGACCGGGATCTGCCTGTACAGAACAAGCGGAAAAGGAGCGTGACTCCTCCAGAGGAGGAACTGCAGGAAGCTGAGGAACCCAAAGCCCGCATTCTCCGCTCAAAGTCTCTGTGTCATGATGAAATTGAGAATATCCTGGACAGTGACCACCGAGAACTGATCGGGGATTACTCCAAGGCCTTCCTCCTACAGACTGTGGATGGAAAGCACCAAGACCTCAAGTACATCTCACCAGAAACGACTGCTGTGAACCTGCCTCTGGAACGGGATGCCGAGACCTTCCTGCTACAGAGCCCCATCACACCCTGCAGCCTGGATAAGAGAATCATCCTCATTTTCCACTGTGAATTTTCATCTGAGCGGGGCCCCCGCATGTGCCGTTTCATCAGGGAACGAGACAGAGCCTCCAACGACTACCCCAGCCTCTACTATCCTGAGATGTATATCCTCAAAGGCGGCTACAAGGACTTCTTCCCACAGCACCCGACCTTCTGTGAGCCTCAAGACTACCGGCCCATGAACCATGAGGACTTCAAGGATGAAATGAAGACCTTCCGACTCAAGACACGCAGCTGGGCTGGCGAGCGGAGCCGGCGAGAGCTTTGCAGCCGCCTGCAGGACCAGTGAAGGGCCAGCAACTGTCCCACCCGCCTTCCTTACTTTGTGCGGCCTGGGCATCAGCCGCCCTGTGGCCTCCGGGGCTGAGGGTCTGCTGTCCAGGGAAAAGATGGTGAGGGCGTCCTGTCTGCCTGCACCAGCCCTGATCCTCTGTCTCACTCCAGTCATGTTCCGTATCCTGGTGACACCCCCATCCTCACTCCAGGAGAGCCCAGCCTGCTGACTAAGTGAAATTGGATTAAGTCTAGCTCAAAGGAAGTATTTGTGTCTAACAGGAGCCTTTTTGGTGTCTTTTTCTTCCTTGTTTGGGTTAACCCTTTGTCTTGCTGTATTCAGAAAAGCCTCTTTTTTCCTAAGAGCTTTGTTTATATGTATGTGGCTGAGAGAAAGCTCCAGCCTCCTAGAAGGAGCCACCGCTACCCTCGGAGTTAGCACCATGTCCCAGGTGCTAACATACTCCTAAGTGTGTGTGCCAAACTCCCTTCTCCTTCCCGTCTCTTCATGTGAACATCTCCAGCACAGGCACGAGCTCTTCCTCTTTCCTGTTTCAGTGTTATTTGTATGTTTGATCTCTTTTTTTTTTCCATCTCAGGATAGTTACAGGCTAAGGTTTAGGTTTTCCCTGTCCAGTTGTTAAAGATACAAACATTCATAACCCACTTGGCCCTGGCTTCTGTGGCTCGGAAAGGGATGTTATTATCCATGGAGGCCCCTAGGTGAGGGTTAAGGCCTGCATCCTGAGCCCACTGGAAACCTAGCCCTCACTGCTGTGAACCCTGGGGGCTGAACCCACGTCAGAACTTGCTGCTGTCTCGTCACAGATGGACAGATGGACAAATGGAAGTGTGGATGGATAGTGGGTGCATGGATGGCCATAGACCCACAATGCCTTGTCCACAAACCACTGAACTGAGGCATTTCAGTGAGTGTGACTGCCTGCAGCAGGAGTATACATGTGCCTGTCTGTGTGAACAAAATCTTTACACTTTTAAGATTTGGAGATATTCAAAAGGAAATTTTATGAAAGCAGCTAAACTAAGGCCAGCCACTTCTGGATTCTGAATCTTGGGAAATGGGCAGGGCTTCTTGAAGGCTCTGCTGAGTCATCTAGAAGGGTCTTGGTTCAATAAAGCACTGAGCAAGCTGAGTAAGTAGCATTGTGTCCTGTGGAGCCCTTAATAAGACTATGGCAGACCCTGATGGTGGAATACAGCAGAGGCAAGTCTCCGGATTGGGGCTGGAAGACTCCTGGGGAGGTGGCCTCATACCCTCTTCCCAAGTCTTGCCAAGATTTTGGATTCAGCCTCCCTGTTCCCCTCATCTGGCTTCTCAAGCACTTCTGGGGTCCATCTTCCTAAACTAGCTCTCCATTCCTAAATTCTGCACCAAGAAGGCAAGAATGATGTCATCAAGTCTGTTCTCTAGAACTGTCAGTGGCTCACCATTGCCTTCAGAAACTTAAAAGTCTCAGCCTTTAGGACCTAGACCCTCTGCTGCCTCATTCCTCACCTCTTGCTGAATTAAATCCCCCATAGTTGCTCTTCACATTTTCTTGTCCTTGCATCTGCAATATGCTCAGGAATGCTCTCCTCAAGCTGCTATTTCTCTTTTAAGATTCAATTTCAAATGTTAATGCCTCCCAGAAGCCTCCCTGCTCTATTAGGGAAATGACTTTCATTATCCCCAGCACTCAGCAAAGGTTCCACCACTTAGGAGGTGCCAGGGTCAAGGTAAAAGAGTAGGAAAGGGCCGATCTGGGAGAACCAGAAATCTGGATGTGTCAGGAAATCCCCTTGGAATACCACAGCAAATTACTCTCTCCCACACCAGCCCAAATATGAGCTATGATGGTAGGGGCTCCTTTGCAAATGTACAACTAAGACACTGCCTGATACAGAGTGCTCATACAACATGTCAAGTGTCATTCCCACTTCTTGTTAAAGTTCTACCTTGCTGTGATTATTCGCTCCATTCTGCAGGTGGGAAAACAGGCTGTTTCTTGCCAGAGCAATAAGAAGAGACTTGAGAGTCCTAGGCTGAGTCTAAACTTGTCCCCCCGATCCCAAGTTTCTTAAGCTCCTTGGTCTTCAGTCTTGGTCTTGAGCCTGCTGCAAGGGCACAGTAGGTAGGAGGGATGATATTGGAGGGGTGGGGGTGGGGGCTGGGCTTCTACTCAAGAAGTGTAGTCCAGAAGCCCCCTCCACTGAGCAGGCGGCTGGCACCAAGCCAGCCTTATCTGGGTGACGGGATTTGCCCTAGAAAAGGGAAAATACTTGTGCAGACCCCTGAGAAAGAGGAAGAAGTAGAGGGAGAGGAGAGAGAGAGCCCTGGCACAGTTCTGAGATTTGCCTGTACCACCCTGAATGCTCAAGTGGTCTGGTTTTATGAGGAGGAAGGCCCCTGGATACTCAAAGGGCACTCACCTGCCCCAGGTCACACAGCAGATACAAGCAGAGTAGATATTCCAGCTGCCCAGGACTCTCACTCTTCACCTTCCCACCTCTGCAAGAGATAAGAAGGTGGGGCTAGGCTGCCTAGCTTCTGCTCTAAGAGTCCTCTTACCACCCTGGCTATGTGGATCAGATCACATGGGGAGGAGAAAGCAATGGGGGCTGAGTGTCTAACCCCACCCAGAATGAGCTAGGTGCTGACAGCTGTGGCCACCTCTGCCCCACTCACAACCCATCATAGTCAGTTGTGATCACTTAGTCTGCCCCAAACACTTTTACCTAGTGTCTCCTAATCACACCAGGTCACACATTTAGCTCATTTTGCAGGGGAAACAAGAGGAAGGGACCTTGATCAAGTGAGGACAAGAGTCTTCCCTGAGAGAAGGCCTTGGTGCCTGGGCCCAGTAGAGAGGGTGCTAGGGTTCACCTCTCCAATTTGGGCTGGGCCAAGACCTCCTTGTCCTGGGAATTTCAGAGGATAGGGCAGAGGTACTGCAGTCCCTACCAGGAAGTGAAGATATAACTTTATTCCTGGATGCTCAAAAAGAGGGGTGGATCAGGCAAGGAAGCGGTTTAAAATCCTGGGCTGTCAGCCAGTTTTAAAGGTTGTTTTGCTTATGCCAAGTCAGGGCAGGAATTCCCACCTCTGGCTAGGAGCCTGGGAGCAGCCACATGCAGCTTACTCACATGGTTTAAGAGTCACACAGGCTCCTGTGCTAGGCCTGACAGAGTCGGGGGGCTGGGGATCATTGGATTTGCTTGCTATTTGTCATTTGCAATGACAATTTAAAGAATGTTTTCTTTTTAAATTGGGGAAAGACTGACATTTCCTCAAAGGTACATATCTTAAACATAGGGCACAGATGTGAGAAGGCACCACACAGCTCAACGTGTCGACATGTCTAGCATCCCAGAAGGTTTCCTCCAGCTCTTTCCCAGTTACCTACACTCTGGAATCACCACTAGTTAACCTCAATTGTAGTACATTAGTTTTACCTGTTCTTGAGCTTCATACAGTTTTGTGTCTGACTGTTTTCACTCAGCATAATGATTCGAGGTCCATCCTGTTTCTTTTACCAATAATTTATTCTCACTATATGGATATATTCCTAAATT EMBV3_34187 ACCTGCCTCGAAACCACATTCCCATCCCCCATTCAAGTTCACCTAGTCCGAGTGCCAGCT Gene GeneID:510813|LGALS9:NM_001015570:235_cdna Constitutive 3 NULL GeneID:510813 19 GENE LGALS9 MGC129126 lectin, galactoside-binding, soluble, 9 EMBV3_02240 TCTGGGGAATCCTGAAAAGACAGTGTTTGGACCAGCTTGCACAGTACAGAGAGAGTGTAC Gene GeneID:535496|PNPLA8:XM_002686783:104_cdna Constitutive 0 NULL GeneID:535496 4 GENE PNPLA8 NULL patatin-like phospholipase domain containing 8 EMBV3_41005 CCCAGATAACACCCTTCCCCTTGGGGCTGAGTTAGGTCTGTGATTTTAAAGCGTTCCTTC Gene GeneID:531139|USP40:XM_002686556:41_cdna Constitutive 1 NULL GeneID:531139 3 GENE USP40 NULL ubiquitin specific peptidase 40 EMBV3_10047 TGGGCCAGATCCGGTACTCTGCGACTTTCTACCTCAACAGCAATGGATTCATTTGTGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27368 CACCTTACAGCAAGAGGAAGTGGGTGGAGTTGTGGGGCAGCAGTAAAGAAATGTATTAGC Gene GeneID:509037|TMX1:NM_001075385:40_cdna UTR3_Alt 3 NULL GeneID:509037 10 GENE TMX1 TXNDC1 thioredoxin-related transmembrane protein 1 EMBV3_03705 TTCCGGCAAATCACAGATCGAGGACACAGACAGCATGGACTTCTCAAGCATTACGCTGAC Gene GeneID:505919|HIP1:XM_002698192:726_cdna Constitutive 0 NULL GeneID:505919 25 GENE HIP1 NULL huntingtin interacting protein 1 EMBV3_35279 CCTTGTGGCTCATGCCAATGGTGGATTCTCTGTGGACATGGAAGTTCTTCGGAATGGGGT Gene GeneID:281510|SYN1:NM_174191:21_cdna Constitutive 0 NULL GeneID:281510 X GENE SYN1 MGC152080 synapsin I EMBV3_00672 GCGTTGTAGAACTCTCAGGGGCATTACTCTAGTGTGCCTTAAATGTGATTTCCTGGCTGA Gene GeneID:785820|ZNF280C:XM_002699530:85_cdna Constitutive 0 NULL GeneID:785820 X GENE ZNF280C NULL zinc finger protein 280C EMBV3_24759 GCAGGATGTATCGTGTGAGGGGTTAGTGTCTTTTGAGGATGTGACCATGGACTTCAGCAG Gene GeneID:537103|ZNF175:XM_002695231:2_cdna UTR3_Alt 3 NULL GeneID:537103 18 GENE ZNF175 NULL zinc finger protein 175 EMBV3_42571 CACTTGGCTAATCTCCCATCCAAGTACTAACCAGGCCCGACTCTGCTTAGCTTCCATCAT Gene BVT0102_216814 + 0 NULL GK000023.2:45272355-45276588 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135339 TCONS_00135340 TCONS_00135337 TCONS_00135338 1 XLOC_081689 Coding TCONS_00135339 XLOC_081689 Coding Coding PAK1IP1 23:45274846-45287411 j TSS100704 3057 1 TCONS_00135339_2 393 0.297023225384364 10 0.757481693728112 1.669293750461e-08 5.40607386298502e-05 8.44430172509745e-09 3.65630541795715e-11 1.19685350978604e-08 3.28181315841597e-05 1.06655565049429e-08 0.000104858195003258 1.18892534218663e-05 2.78346998674351e-12 0.000418278036455709 0.000360900696490232 1.37173326821412e-09 0.000551276446769447 8.73066077774287e-09 0.00535951547056328 2.04698032265157e-06 0.00143640060813609 1.05555347590695e-08 3.68976483388568e-10 2.38402239816642e-08 0.00292835655229317 0.00217378276123392 0.00370446651646028 9.94761653932895e-07 5.81086775732422e-09 8.25197029690348e-05 0.000554103697265305 0.00109581789700897 0.000386268248016952 XM_005223850.1 PAK1IP1 PREDICTED: Bos taurus PAK1 interacting protein 1 (PAK1IP1), 0.0 3135 100.00 0.568204121687929 XM_005249204.1 PAK1IP1 PREDICTED: Homo sapiens PAK1 interacting protein 1 (PAK1IP1), 0.0 1395 81.45 0.459273797841021 TCONS_00135339_2 sp|Q5EA99|PK1IP_BOVIN PK1IP_BOVIN p21-activated protein kinase-interacting protein 1; 0.0 768 99.24 0.997455470737914 1 coding 0 0 0 0 -0.222305231590312 0.145661069481798 0.0536464014719502 0.355981519784137 CGTCGCATCCGCTTTCGTCACTTCCGCCCTGCGCCGCGTCAGGTTCGCTGAGGAGGAGACGCGTTCGCCACTGGATGGAGGTGGTTGCTGGATGCTACGAGCAGGTCCTTTTTGGATTCGCTGTACACCCTGAGCCCGTGGGCGACGGCCACCGCGAGCAGAGATGGGCTCCTGTGGCCGACTTCACCCACCACGCCCACACTGCCTCCTTATCAGCGGTGGCTGTCAACAGCCGCTTTGTAGTCACAGGGAGCAAAGATGAAACCATTCACATTTACGACATGAAAAAGAAAGTCGACCATGGGGCGCTCATGCATCACAATGGCACGATCACTTGCCTGAAATTCCACGGCAACAGGCACTTGATCAGCGGGGCCGAGGACGGCCTCATCTGTGTCTGGGACGCAAGGAGATGGGAGTGCCTGAAGTCGATCAGAGCTCACAAAGGACATGTGACCTTCCTTTCCATTCACCCATCTGGCAAGTTGGCCCTGTCTGTGGGTACAGATAAGACACTGAGAACATGGAATCTTGTGGAAGGAAGATCGGCATTCATAAAAAACATAAAACAAAGTGCTCACATAGTGGAATGGTCGCCAAAAGGAGAGAAATACGTAGTTGTCATACTGAACAGAATAGACGTCTATCAGCTCGACACTGCATCCGTCAGTGGCACCATCACAAATGAAAGGAGAGTGTCTTCTGTTACATTTCTTTCAGAATCTGTCCTCACAGTGGCTGGAGATGAAGAGGTTGTAAGGTTTTTTGACTGTGATTCCCTAACATGCCTCTCTGAGTTTAAAGCTCATGAAAACAGGGTAAAAGACATGTTCAGTTTTGAAACTCCAGAGCATCACGTTCTTGTTACAGCATCGAGTGATGGTTTCATCAAAATGTGGAAGCTTAAGCAGGACAAGAAAGTTTCCCCGTCTCTATTGTGTGAAATAAACACGAACGCCAGGCTGACGTGTCTTGGGGTGTGGCTGGACAGAAGGACAGACACAAAAGAAAGCCCGCCTGCTGCCGCCGAGCCTGCTCCTGTAAGTAAAGAACAGTCCAGACGCAACAAAGAGGAATCTGGCCATGCAGTCCAGGAGGAAGAAAAGCAGCCAAAACCAGACGCAGAGAAATGTAGTTTAACTGGTGACAGTAATAAGCCAACAAGGGGAAACAGCCTGGTGTCAGCCAAGAAGAGAAAAACAGTAGAAATGTTGGAAAAAAAGAGAAAAAAGAAGAAAATACGAATGATGCAGTGAATCCCAGATTTTTCCTAGCAGGAAATTTTTTTCAAATATACTTTTTTTTTTTTTCCCCTAAGTAAAAGCTTGGAATTTCTTCTTTTGAAGAAAACGTACAGCTTAAAAATCACGTTCAGGTTTTTTTTAAAAACTGTGGTAAAACTTTTTGAAAGGCAATATTAATTATATATCATGGTGATATTATAGTATCTTAATGTATAATATGGGCTTCCCAGGTGGCTCAGTGGTAAAGAATCTACCTGCCAATGCAGGAGACAAAGGTTTGATCCATGGGTTGGGAAGATCCCCTGGCGAATGAAATGGCAATTCACTCCAGTATTCTGGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTGGACCACAGTCCAGAGGGCTCACAAAAGAATTGGACATGACATAATGACTGAGCCCACACACATGCAACCTATAATATATAATTTTTACTGCTGTGTAAAGTAAATAAAGATCTTTCTCTAAATATTGTGGCTTAAAATAATATAAAATCCTGAACACATTTTTACCAAAAGTGGATAAAGGAGTTATTTTTCAGATTTTCTATTTAAGTGGGGGAAGAATGAAAAACCTGCATTACTTTGGCCTCTTCAAGTGGTTCTAATAATTTTAATGAGGATTTTGTTCATTTTGATAACAAATGGTATAAAAAGACATTCATACCAGGAAGTTAAGACAAGCTTAAGAGCTACAGATAAATAAAATACATATGTATAATGCATATGCTGAAGTTCAGGGCTCCGAACAGAAGGTTAAAGAGAGGCTGCCAAACTTGATTAAACTGTTCTATTTCCAGTGGATGACAAGGAAATGTTAAGATAGGAAAATGACATTTCCTTTATTTTAAATCTGCTTCAGCCCATTAAAAAAAACACTTGGCTAATCTCCCATCCAAGTACTAACCAGGCCCGACTCTGCTTAGCTTCCATCATCAGATGAGATGCGGCGCGTTCAGGGTGGTATGGCTGTAGGCTTTAGTTAATCTTCTAACAAAGGTAGTCTTAAAACTATATCTTAATTATTTGTATCTTATTTCAAAAAACGGCTCTACCAGGGCCTAGGACTGTATGTAATTAAATCTGTGGTTTCAGTTCAGTTGCTCAGTTGTGTCCGACTCTTTGAGACGCCATGAACCACAGCATGCCAGGTCTCCCTGTCCATCATCAACTCCCGGAGTCCACCCAAACCCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTTATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCTTTCCCAGCATCAGGGTCTTTTCTAATGGGTCAGCTCTTCGCGTCAGGTGGTCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTACCAGTGAACACCCAGGACTGATTTCCTTTAGGATGGACTGGTTGGATCTCCTTGTAGTACAAGGGACTTTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGCACTCAGCTTTCTTTATAGTCCAACTCTCGCATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGATGGATCTTCGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCCTTACAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAGAAAAATAAAAGTCATCCACTGTTTGCATTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACGAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTT EMBV3_37110 CACTGTCCTCCCAGAGTCAAACACAAATGGGCCACAGGACACCCAGGCCTGTTTTCAGCT Gene GeneID:614335|RAB3IL1:NM_001046532:106_cdna Constitutive 0 NULL GeneID:614335 29 GENE RAB3IL1 MGC128938 RAB3A interacting protein (rabin3)-like 1 EMBV3_20504 GACCCTAAAACTGGCAACATTACTTTGGAAGAGGCATTGCTGCAGACAGATTATGGGCTC Gene GeneID:616023|PCDH20:XM_002691724:2_cdna Constitutive 0 NULL GeneID:616023 12 GENE PCDH20 NULL protocadherin 20 EMBV3_32494 AGAAGCACTGCAGAGTGTGAGCAGGAGGTCATGGAGTTGTGGCCAGAAAAGACATTCTTC Gene BVV0102_014304 + 0 NULL GK000022.2:49717833-49725310 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128893 TCONS_00128894 TCONS_00128896 TCONS_00128895 TCONS_00128897 TCONS_00128898 1 XLOC_077968 Coding TCONS_00128897 XLOC_077968 Coding Coding LOC784245 22:49720175-49840454 j TSS96004 9726 1 TCONS_00128897_8 963 22 0.919320241440662 1.20671719114104e-06 0.00272007306925131 0.00324690851972734 0.00312722726090432 0.00477693768504552 6.28212870442678e-13 0.00234672989213853 0.00232440396062802 0.00511279776889977 0.00193118839720355 0.000367573481117042 0.000252484930754214 0.000986020436007296 0.00210042099505772 0.00134461886376596 0.00386141004434618 0.00275049218319211 0.00250947899448381 0.00274243868449447 0.00573596043360106 0.00155777282232909 0.00132245200729603 0.00205447184596887 0.00194498623954549 0.00370139511833627 0.00341309690469912 0.00287560344901979 0.000944938551653136 0.000644793361914056 0.00157767935097486 XR_083438.3 LOC511069 PREDICTED: Bos taurus helicase ARIP4-like (LOC511069), misc_RNA. 0.0 7984 99.20 0.463705531564878 NM_015106.2 RAD54L2 Homo sapiens RAD54-like 2 (S. cerevisiae) (RAD54L2), mRNA. 0.0 4715 92.12 0.335184042771951 TCONS_00128897_8 sp|Q9Y4B4|ARIP4_HUMAN ARIP4_HUMAN Helicase ARIP4; 0.0 1864 96.68 0.998961578400831 2 coding 1 0 1 1 -0.24088828482599 0.0933581878855636 0.0129659691617054 0.782952397306777 ACCCAGGCAGCTTTGCATCAGAGCGCCCTTCCTTAGCTCCTCTCATCCAGCAAAACTCCAAAAATGATTACTGGGGCTTCTAAAGAAGACCCCTGCAGTGGACCATGAGACGGTAATGTCCACTGAGGACCTCTGGGAGCCATGTCAGACGAATCCGCCTCAGGGAGCGATCCAGACCTGGACCCAGACGTGGAGCTGGAGGATGCGGAAGAGGAGGAGGAGGAGGAGGAGGAGGTGGCAGTGGAGGAGCATGGCAGGGATGATGGGGAAGACCTGCTGGATGACCCATCCCTGGAAGACATGTGTGGTACTGAGTGTGCCCAGCTGGGAGAAGATGGGCAGCAGCCACCGCGGTGCACTTCAACTACCTCATCTCAGTCTGAGCCTTCAGAGCAGCTTAGGCGCCACCAAGGCAAGGGCCTTGCCTCCGAGGACCCCAAAAAGAAGAGAGCTCAGAAACCCTCCCACATGAGAAGAAACATAAGAAAGCTTCTCCGGGAGGATCAGTTGGAGCCAGTTACCAAAGCAGCACAACAGGAAGAATTGGAAAGAAGGAAGCGCCTGGAGCAGCAGAGAAAGGATTACGCAGCCCCCATTCCCACCGTCCCCCTCGAGTTATTTCCCGAGGAAATTGTCTTAAGAGCAAGCGATGGTCCCCAACTGCCTCCTCGCGTCTTGACCCAGGAAGTCATTTGTTTGGACAGTAGCAGTGGCAGCGAGGATGAAAAAAGCAGTCGAGATGAGGTGATTGAACTGAGCTCTGGAGAGGAGGATACTCTGCACATTGTGGACAGCAGTGAGTCTGTCAGTGAGGAGGATGAGGAAGAGGAGAAGGGTGGCACCCATGTGAATGACGTCTTAAATCAGCGTGATGCTCTGGGGCGGGTCCTTGTCAACCTGAACCACCCTCCGGAGGAGGAGAATGTCTTCCTGGCCCCTCAGTTGGCACGGGCGGTGAAACCTCATCAGATTGGTGGGATCCGATTCCTCTACGATAACCTGGTTGAGTCCCTGGAGAGATTTAAGACCAGTAGTGGCTTTGGCTGTATCCTGGCCCACAGCATGGGCTTGGGGAAAACTTTGCAAGTGATCTCCTTCATCGACGTTCTCTTCCGCCACACGCCAGCCAAAACTGTCCTTGCCATTGTGCCAGTTAATACTCTTCAGAACTGGCTGGCAGAGTTCAACATGTGGCTCCCAGCTCCTGAAGCCCTTCCAGCTGACAGTAAGCCTGAAGAAGTCCAGCCTCGGTTCTTTAAAGTTCACATCTTGAACGATGAGCACAAGTAGTTTTTCAATAGTCAGAGTTACGTAGCACAGAAATTTTTGTATTCTGCTCGAAGACAGTTTGAGAAGGCCTTATGCCGCCCTGGCCCTGATGTGGTGATCTGTGACGAGGGACACCGCATCAAAAACTGCCAGGCCAGCACCTCCCAGGCCCTGAAGAACATCCGCTCCCGCCGCCGGGTGGTGCTGACCGGGTACCCCCTGCAGAACAACCTCATCGAGTACTGGTGCATGGTGGACTTTGTGCGCCCAGACTTCCTCGGCACCCGGCAGGAGTTCAGCAACATGTTTGAGCGCCCCATCCTGAATGGACAGTGTATTGACAGCACGCCTCAGGACGTCCGCCTCATGCGGTACCGGAGCCACGTCCTGCACAGCCTCCTGGAGGGCTTCGTGCAGAGGAGAGGCCACACTGTGCTGAAGATTCATCTCCCTGCCAAGGAAGAAAATGTGATCCTGGTGCGACTCTCTCAGATCCAGCGAGATTTGTACACACAGTTTATGGACCGCTTCCGGGACTGTGGTAACAGTGGCTGGCTGGGGCTGAACCCTCTCAAGGCTTTCTGTGTATGCTGCAAGATCTGGAATCACCCCGACGTGCTGTATGAAGCCCTTCAGAAGGAGAACCTGGCCAATGAGCAAGACCTGGATGTGGAAGAGCTTGGTTCAGCGGGAACTAGTGCCCGCTGCCCGTCACAGGGAACAAAGGGCAAGGTGGAGGACAGCGCCCTGGCCTCCTCAATGGGAGAGGCGACCAACAGCAAGTTCCTCCAAGGGGTCGGCTTCAACCCTTTCCAGGAGCGAGGCAACAACATTGTCACATATGAATGGGCCAAGGACCTTTTGACTAATTACCAAACTGGTGTCTTGGAGAACTCTCCCAAGATGGTACTGCTTTTCCACCTGATTGAGGAAAGTGTGAAGCTTGGAGACAAGATCCTTGTGTTCAGCCAGAGCCTTTCCACCTTGGCTTTAATCGAGGAGTTCCTAGGGAAGCGAGAAGTGCCCTGTCTACCTGGTGCTGAGGGGCAAGGAGTACAGAAGTGGATTCGAAACGTCAGCTACTTCCGGCTAGATGGTAGCACCCCTGCCTTTGAGAGGGAGCGGCTCATTAATCAGTTCAATGATCCCAGCAACCTCACCACCTGGCTGTTCCTTCTCTCCACAAGGGCTGGGTGTTTGGGCGTGAATCTGATTGGTGCCAACCGAGTGGTGGTGTTTGACGCTTCCTGGAACCCTTGCCATGATGCTCAGGCTGTATGTCGGGTATACCGTTATGGCCAGAAAAAGCCTTGTCACATCTATCGCCTTGTGGCTGATTTCACCCTCGAAAAGAAGATCTATGACCGTCAGATTTCGAAGCAGGGCATGTCAGATCGGGTGGTGGATGATCTCAATCCGATGCTGAACTTTACTCGAAAGGAGGTGGAGAACCTACTGCACTTCGTGGAGAAGGAGCCAGCTCCCCAAACATCCTTGAATGTAAAGGGGATCAAGGAGCCAGTCCTCCAACTTGCCTGTCTGAAGTACCCTCACCTCATCACCAAGGAGCCTTTTGAGCATGAGTCATTGCTCCTTAACCGAAAGGATCACAAGCTGACCAAGGCTGAGAAAAAAGCAGCAAAGAAGAGCTATGAGGAGGACAAACGTACATCAGTCCCCTACACCCGCCCATCATATGCGCAGTATTACCCGGCCAGCGACCAGAGCCTGACCAGCATCCCTGCCTTCAGTCAGAGAAACTGGCAGCCAACCCTGAAGAGTGATGAGAAGCCCGTGGCCAGTGTTCGCCCCGTACAGTCCACCCCGATCCCCATGATGCCACGGCATGTCCCGCTGGGAGGCAGTGTAAGCTCTGCCTCCAGCACAAACCCAGCTATGAACTTCCCGATCAACTACCTGCAGCGTGCGGGAGTCCTTGTGCAGAAGGTGGTCACCACAACAGATATTGTTATTCCCGGGCTCAACAGCTCCACAGATGTACAGGCAAGAATTAATGCTGGCGAGAGCATCCACATCATCCGTGGGACAAAAGGGACATACATCCGTACCAGCGATGGGCGAATCTTTGCTGTCCGGGCGACTGGCAAACCAAAGGCCCCTGAAGATGGTCGGATGGCTGCCTCAGGTTCCCAGGGGCCTTCTCTCGAGTCTACAAGCAATGGCAGACACAGTGCCTCATCACCTAAAGCCCCCGACCCCGAGGGGCTGGCCCGGCCCGTCTCTCCAGACAGCCCGGAGATCATCAGCGAGCTCCAGCAGTATGCGGATGTGGCTGCTGCCCGAGAGTCCCGCCAGAGCTCCCCAAGCTCCAGCACCGCCCTGCCTGGCCCCCCGGCTCCACTTGTGGACAGCAGTGCTGTTCCTGGGACAGCCCTCGGGACTGAGCCTCGACACGGGGGTCATTGCCTCAATAGTTCCCTCCTGGTGACCGGCCAGCCCTGTGGTGACAGGCACCCAGTGTTGGACTTACGGGGCCACAAGCGCAAGTTGGCCACCCCACCTGCTGCCCAGGAGTCAGCCCGCCGGCGGTCCAGGAAGGGCCATCTGCCAGCTCCCGTGCAGCCGTATGAACACGGGTATCCAGTTTCTGGCGGGTTTGCCATGCCACCCGTCTCCTTAAACCATAACCTCACCCCTCCCTTCACCTCCCAGGCTGGGGAGAACTCCCTGTTCATGGGCAGTACCCCCTCCTACTACCAGCTGTCCAATTTGCTGGCAGATGCCCGCCTGGTGTTTCCAGTGACTACTGACCCTCTGGTGCCGGCAGGCCCCGTCAGTTCCTCTTCCACGGCTACCTCAGTCACTGCCAGCAACCCCTCCTTCATGCTCAACCCCTCTGTAACAGGGATACTCCCCAGCTACTCACTCCCATTCTCACAGCCACTCCTGTCCGAGCCAAGGATGTTCGCGCCTTTTCCTTCCCCTGTCTTGCCCAGCAACCTTTCACGGGGCATGTCTGTCTACCCCAGCTACATATCCCCACACACAGGCTACCCAGCCGGTGGCCTCCTCCGGTCCCAGGTGCCTCCATTTGACTCTCATGAGGTTGCTGAGGTGGGGTTCAGCTCCAATGATGATGAGGATAAGGACGATGATGTAATAGAGGTCACTGGGAAATAGCTGAGGATCCCCTCTCCACCTCACTCGGGGCCCCCAGCAGGTCGCCCACCCAGACGGAAGGCAGCAATCTGGGGTTTCTGAGAATAGGGCCCTTGACAAGAGGGGAAAGGAAGAGGACAAAGAAGGGTGGTTGACCATAGGTGGCAGGGCTCTGTTGCTGTTTTAACAAAAGAGGCAAAAAAAAAAAATTCCAACAGAGCAGCAATAGTGGGAAATCAGGGACCTAAAACAGGAATGGAGGGGCAGGGCAGCCTGCCTCTCTTCCTGCCTGCCTTGCTTATGCTGTCTGCTTGCTTGCTTGCCCGTCTGAGGGTAGAAGCTCACATCCCATTTCTGTCTTTGGGAACATTCTCTCCTGAGAGAGCTGCCTTACTGGGTGACTTAGCTTGGTCTGGAGAGGGGAGGGGAGGGAGGCAGGGGAAGAGAAGAAGGGTGGGCAGACTGAGATTCCATGCAGTCGGGTCTTTTTAGGGGATGGGAAAGAAGCAGACCAGGTGTGTGTGCGTGTGTACGTGTGTGTGTATGTGTGTGTGTATATGTACTTACATGTATGTAACAGAGCAGGGGTGCAGGTGGGTGGGAAGGGAGGGAGGGAGGGAGGGACTAAGGGGGAAACTAAGAAATGAATTTATCTTTTATAAAATGGAAATCAGAGCATGGTGGTTCATGGCAACTATTACTATGAACATCAGGGTGAGCCCAGGAGAAGAGCCATGGGAACCACAAGTTTCCTTCTAGTTGGGTGAAGACCAGGCCCAGCTAACCCAAGTCCCCGGTTATCAGAGCCACACTTGATTCAAGACTGGGGGGAGATTATCAGAGAAAATGGGCATTACCAATCTCTCTTTCTCCAGTGGCTTTCTCTGAGCAAGATCTGCCTTTCTGGCGTGTGAGAGTGTCAATCTGCCGAAGCTGGGGGGGAGAAGCACTGCAGAGTGTGAGCAGGAGGTCATGGAGTTGTGGCCAGAAAAGACATTCTTCACGAAGATGGAACCGAGCCCCCAGCTGCCCGTCCTGGTGGCCTTTCTTGGCCTTTCCTTTCCTTCCCCATTAGCGAGCTCCATGTTAATTTATTTCTTATGGGCAATTATTTATTATTTGGACTTTTCATGTGTCTTGGTTCTTTTTTGGGGGGTGGGTGGGAGGGGAGGTTAGGGTAAGGAGGGTAAATGTTGGGAAGGGAAAGTTTATGTCTCAGACCCCACAGCTGCTCGTTAGTAAATTCCCAGTGGATGGCGAAGTGACCAAGGATAGAGAGTTAGCCTTGATGAAGGTCTACACTAAGCAACTATGTTTTCAGCAAATGGCCTCTCAGGAAGTTCAGGGAATCCTGCGACTGGGTATTAGCGATGATGCGACTCATTACACAGCGATTGAAACTTAGGATCATGGAGTTTGCAATTGGGAAGTAAGTGACCCCAAATTCGGAGGTGTGTCCTCTTGGGATGACCTTAGAGGCAGGCTCTATGCTGAATAGTGAAGCTGGGTGTAGGTGGCTGCTGGGTTGACAGAACAGACAGTTGAGCTCATATCGGGAAATGTTTGGCTTCCTCAGCCTATCAGGTGATCAGTGTGGGCCCTGGTGTCTGCTACCTCCATCCTCTGTGGAGGAGCCCTTCCTCTGTAGAAGCCTTAAATCATCATAACACATTGGTCATTCTGAGTCTCCCCTTATTACCAGTGCTGGAGGCTGAGGGGCATCTAGTCTAAGCATAAGCACTGTCTTCCTTTTGGCTTTTCTGCCCCTACTGCTGAGACCTTGCTGGGCAGTTCTTTAGGGAAAACAAGCCCTGTCTGGCTTCAGAGCTGTACCGCCTCCCCATTGGTCCCTCCTCACTGGCTGGGCGGCTGCCGCGCCTGCCTCTTCTGAACCCTGGGGGCAGCTTAGCTGGGTCGCCCCTAGTAGTAGCTGCTTCTGCAGTTCTTCTGAACAGCCCATTTCCATTGGTGGGGGGGTCTTAGCACACTCTGGGGACACTCTGGGGTATTATCCCCAAGAAGGGACAAGGAGATGGCTGTTACGTGCGCGTGTGTGTGTGTGCGTGCGTGCGCACTGTTCAGTTACACCAAAAGTGGAACTTAAGGAGCTTGCTTTCTCTGTTTTCATAAGCACCCTGTCAGACACTTAACTTTCCTCTTCATAGAAGCCTTAGACCTACAATTTAGCTATGCAAATTATTTTAATAATTTAAAAACAGCAGTTCCAACAGTGCTTTCTCAGATGCATCCTGAGAATGAATGGTGAAGGGGCTGAGTTGGAGTGGGCTCTCTGGCTGAGGCTGGTGCAGAGGGAGTAAGCTAGCCTGGATCTCTTGATTTGCAAGGAACACTCACCACCTGGGCTACAAATGATGCCTCTAAGGCCCCAGAGCACTGGGATCCCAGAGAATGTGTGTGGGGAAGGAGGGGTATTTTTGTGTTCACCTCTAGGAAATCACAGCAGCAGACTGAGAATCCAGAAACTATCCCAGTGAGGAACTAAAAGCAGCCACTGGAGGGATGGGCTTTTAAATGTACTGGGAACCAAATGGGTGTTCTCTGCCATACAAGCCTGCCCTCTTCCCAGTGGTTCTAGGGGCTGAGTCGTGCTTCATTTCAGGAGAGGCCGCAGTTTTGGGAGGCTGTCCTGGGTAGACAAGGTTTTCTTTGATTTATGCAGCTTACAGTGTATAAGGGAGTAGGGCTAGGATCATGGGAAATTAGAGTGCTGCTGGTTCCATGGTTTTCCTTTTAAAAAAAAAAAAAAACCTGAAAACACTTCTCTGACATTTCTGCTATCTCTGTGTGCAGGTAGGCAAGCGTGCATGCACACCAAATATGAACATATGTGTGAGGGAAGCAGGAGCTGTTTTAGAACCTAAGAACGATGTTTTACTGTTTCTCTGATGAGAAACAACTTGGCAGTGATGCCCACCCACCATTCCGGCTTGAGTAAGGGAAGGATGGTAAGAGGGAGGGCAGATCAGGTTTAGCCATCTTCCCTCACTGCTGTCTTCCATAGCATGTTTTCAAGGGCCTCTCAAGCCCCATCTGTCTGGTTTAGCCTAAGTCCTCAATCTAGGGGATATAGTACTATGTAATGATTCAGGATTACCACTTGTAGTAATGCTTGACTTGCTGTCTCAGTATCTTTGTAGATAGAAATTCAACAGAGATTAGCCGCTGAAGTGAGAAAGTAAGTGAGCCATGTTGGATCCATGTCATTTTCAAATTAGATATCTGCAGAGTTCTCACTGCCTCCAGTTACGCTTCTCAAGCATCTGTCTTAAGCATCTTCTGACTTTAGGATGTCTCTGGTCCTTAGAACTCTATTCCCTAGGAACTAGTGTGTAGAATCTCTATATACTTGTGATTCACAACTAAATATGAACATTTCCCACTCCAGGACATGAAGCAAGTAGCTGGGGTAACATTTTGCTGATAGGTTGAAACACTCAACCAAGATTTTAACAGTCTGGGTGGGACTGTCACTCCCACAGCAGTCAGAGCAAGGCACTCTTGTCTGTGCATGCCTGGCATCGCTCTGAATTGAGTCCTCATCCGTTGGGAGAAGGTCTTCTGGGGCTTTACATTCCTGTTTCTCTGTTTCTGTTCATAACCCCCTTGTGCTTCCCAGTCCCCTGTGATTCTACAGGAGACCCGTCTCTCCTCTCTGAGCGGTGGCCTCCTGTGCACCCAGCTCAGTGACTCTCCTTGCACCAAAACTCCTGAGAGAAGAACAGCTCCCACCTTTAGATCCCTAGCAGACTTTCTGGCCCTCGGCAGACGGTTTCCAAGAAAGAAATCTGCACCTCATGGTCTGTCTGAGAAGGGTATGCTCTCTAATCCCTCACTGCAGACTCTCCTTCTGACTGACTTCTGCCCTGTATATTCCACTGTGACCCCTTTGCGTGTGTTCTGTGCCACTGGCTTGGCTCTAGTCCTTTTATGAATACCCTAGTCTTACCGATGAACTTGCTGAGCAGGCAGAGTCCACCTTCTCTGCGCTTCGGGGACTTGGTCTCCTTTCCTCTCTCAGAGGTCTGTTTGCTGTCATAATCTAGTGCGTTGGGGAGAGGTAACTAGACAGGCTGTAGTGATGGGCCGGGGGAGATCTGAGTACTCCGTTACCACTATTGGGATAATATTCAGAAGAGGGGATCTCATACTGTGACCTGACCTAAGGCCCTCCCCTGGAAGAGAGCTCAGTCCAGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGGTAGAGTGTGTGTGCGTACATGTGCTTATGTGCACATGGGTATAACCTGACTTATCTGGTTGTGTTACTCAGGGTGGGCTGGGGACTCAACAGAAGAATCCCCTCAGCCTGCCTGCCTGTGTTTTTCCTGTACCCTCTCCAGAGGGGTTGGGGAAGGGGGTCCAGGGTGGGTTGAGGGGGTCGCAATGGATAACCACTAAGGCCACACTGCTGCCAGGGGGAGTCAGGGGGAGATGAGGTGGCCCCAGGGACCTGGCACCTGGCTTTGGTTTTCCGTCTTCTTTCCTCAGGACGCCCCCTGAGGCCTGGGACCTGCGCCTGGCTTTGAGGAGCACCTGTAGCTGAGTGCTCCGGCTGCTGGTGTGATCACGGGCTTCCCTCCTCTCTCAGCAGGGCAGGTGCTCCTGCCCTAGAGACTGGGCAACTGGCTGTTTCTATGACGTATTTATTTTTACTTGTGTTTCATGTCACTTTTTTAAAAAAAAGCAAACAGAACAATTGTAAGTCAGTATAACTGCCTATCAGTTTTCTTTATTTCTCTTTTTGTAAAATAAAATGTAAACTGAAGAAGGCAGTGTTGTTTAATCAAGGAATTGTCTGAACAGCTCTGTGGCTGGGTGATGGTGTAAGGGATATAACTTAGAGCAGTGTGGATGCTGAGATGGCACCTCTGGGGGTGGGAACAGAGGACAGATGGCTGGCAGGCTCTTTTTATGCTGTGTTCTTCACTAGACTTTTTCTGCCTTGACTCACCTGAAGAAGACTGCATTTCCTGGCTCTAGAGGAAATAGCAAAGCTGACTCCGAGTGGCTTGAGGCTAGTTGGTCCCTCAGTCATGGCAAGTCCTGCAGGGGTAGCCCTAACTAGGCTGTGAGTGGCCAGGGATTGGCCTTCAGAGGGTGGGAGATGGCTGGTGGCAGGGTTTGCAGAGCATCTTACATTGCATGTACATTCTCCCTTTGTCATCTGAATTAGAGGATCTAATCACCACTTCAAAGAGAACTAACCTGAAGAGGGAGAAGGAGGGGGTTGTCTCTGCTTTGTTTCCTGTTTGGGGAAACTATCTGGAATTTACTAAGGGAGAATTAAAGAGC EMBV3_33369 TGGAGTGGGACTTCCCTACCATTCTGTGCTCTCTTGACCCTCAACTCAGTCAAAACTCAG Gene GeneID:100335747|LOC100335747:XM_002689668:14_cdna Constitutive 1 NULL GeneID:100335747 8 GENE LOC100335747 NULL hypothetical protein LOC100335747 EMBV3_14701 TAAGAACCAGGGCTCCTGTGTCCCTCCTCCAATTCACTCTTGTTCGCCTGGAAAAGGAAC Gene BVT0102_125275 - 1 EMBV3_09074 GK000013.2:37332000-37422253 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00128 TGCCAAGAGCCTGCCCCTGCGCTCCATCCTGGGGAACATGGTATTTAAAAGAGAGACTAT Gene GeneID:520058|MAP4K2:XM_002699335:193_cdna Constitutive 0 NULL GeneID:520058 29 GENE MAP4K2 NULL mitogen-activated protein kinase kinase kinase kinase 2 EMBV3_33329 CACCGTGATCAAATGCCGGAACCTCAAGGCAATGGACATCACAGGCTACTCAGATCCATA Gene GeneID:537637|SYT6:XM_002686110:120_cdna Constitutive 0 NULL GeneID:537637 3 GENE SYT6 NULL synaptotagmin VI EMBV3_01801 CTGAATCTGCTCCTGTGTATAATCATTTGGGAAAGTAGAAGTGATTACCTCATGAGCAAG Gene BVV0102_413833 + 0 NULL GK000002.2:25026798-25045499 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104775 TCONS_00104766 TCONS_00104769 TCONS_00104771 TCONS_00104774 TCONS_00104767 TCONS_00104770 TCONS_00104768 TCONS_00104765 TCONS_00104772 TCONS_00104764 TCONS_00104773 1 XLOC_062452 Coding TCONS_00104764 XLOC_062452 Coding Coding DCAF17 2:25040774-25065120 j TSS77504 6634 1 TCONS_00104764_2 420 0.312782634911064 12 0.727993427808585 1.35740487623018e-46 9.54501815694312e-32 1.03243192475469e-14 3.14044632926926e-05 2.07470670033392e-05 3.44810814655054e-91 2.34710373940035e-05 1.97087393666461e-62 3.05684021679364e-37 9.08485276113862e-18 4.26755897350298e-05 2.7833365455241e-86 4.27284448416679e-308 1.12819877701586e-14 1.1631627162128e-16 0.000168112012736057 3.87270534902409e-24 0.000330664870040937 5.92080735711465e-218 8.49553264020983e-11 1.24027369281083e-32 0.000263175849579157 0.000356447106717173 0.000117079892166238 1.57669913031482e-101 4.13400939465093e-64 5.2934173364786e-21 2.17075650149976e-15 2.73947728366335e-25 4.06309870664586e-15 NM_001191489.1 DCAF17 Bos taurus DDB1 and CUL4 associated factor 17 (DCAF17), mRNA. 0.0 1689 100.00 0.140940608984022 NM_025000.3 DCAF17 Homo sapiens DDB1 and CUL4 associated factor 17 (DCAF17), 0.0 2524 82.05 0.381971661139584 TCONS_00104764_2 sp|Q5H9S7|DCA17_HUMAN DCA17_HUMAN DDB1- and CUL4-associated factor 17; 0.0 792 91.44 0.971428571428571 0 coding 0 0 0 0 0.520918227912705 0.0615318296415172 -0.0283916693248636 0.599836181250032 CAGTATTCTTGCCAGGAAAATCCCATGGAAAGAGGAGCCTGGCAGGCTACGGTCCATGGGGTCACAAAAGAGGCACAATTTTGGCGACTAAATGAAAAAATAATTATTTCAGGGAGAAATGCTTCCCAGTCCATCAGATTATAAATCTTCACTCATAGCACTGACTGCTCATAATTGGCTGCTTCGTATATCAGCAACTACAGGAAAAGTCCTTGAGAAAATATATCTTGCTTCATATTGCAAATTCAGGTATTTGAGCTGGGACACTCCTCAAGAAGTCATTGCTGTCAAGTCAGCTCAGAACAAAAGTTCAACATTGGCCCGACAGGCAGGCATTCAACAGCCTGTTTTGCTGTATCTTGCAGTGTTCCATGTGCTACCTTTTTCACTCATAGGGATTCTGGAGATCAACAAAAAGATTTTTGGGAACGTCACGGATGCCACCTTGTCTCATGGAATACTGATTGTGATGTACAGCTCGGGACTGGTCAGACTTTATAGCTTCCAAGCCATCACCAAGCAGTTCATGCAACAGAAACTTGACTTAGGGTGTGCATGCAGATGGGGTGGGACTACTGGAACTGTAGGAGAGGCTCCCTTTGGCATTCCTTGTAATATTAAAATCACAGATACACCGCCACTGCTCTTTGAGGTGTCCTCGCTGGAGAATGCTTTTCAGATTGGAGGCCATCCTTGGCACTACATCATTACACCTAATAAGAAGAAACAGAAAGGAGTTTTCCATATTTGTGCCTTAAAGGACAATTCCTTGGCAAAAAATGGGATCCAAGAAATGGAATGTTGTTCTTTAGAATCTGATTGGATCTACTTCCACCCTGATGCTTCTGGCAGAATAATACATGTTGGCCCAAATCAGGTCAAAGTTTTAAAGCTAAGTGAAGTAGAAAATAATAGTGCCCAGCATCAGATCTCTGAAGATTTTGTCATTTTGGCCAACAGAGAGAGGAACAAAAATGAAAACCTACCCACTGTTACAGCTTCTGGACGGGTGGTAAAAAGAAGTTTTACCATTCTGGATGATGACCCAGAACAAGAGACTTTCAAAATTGTCGACTATGAAGATGAGTTGGATTTGCTTTCTGTGGTAGCTGTTACTCAAATAGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTGTAATGAATATGGAACTTTACTTAAAAGTATTCCACTCATGGAGTCATGGGATGTGACATATAGCCATGAAGTCTACTTTGACAGAGACTTGGTGCTCCACATAGAGCAGAAGCCCAGCAGGGTCTTCAGCTGCTATGTTTACCAAATGGTATGTGACCCTGGGGAAGAAGAAGAAACCACAGACAAAAGGAATAAAACAGATCACAATAATTTTACATTTTGAGATGTAACTTATGAGACTTCTAGCCAAACACCCCAGGAGCCATGGCCAGTCCTCTTTTTTATCATCTGCATAGTATATTCTCCAGTGTTTTCCAGAAAAGGTCTTGTGTTGACTTCAGACATTTGTGACTTCTTTTTTAAACTCTGGCCATACAAGGTGGTGAGGACTTCACTTTATATAAAGGTTTTTACAATAACATCCCAAGAAGCCTAGCATTTTGCAGTTTTTTAGGTGGGTGGTGATGCAAATATAAAATACTAAAGGTCAGAGAAGGAAAGTTAATTCTAATTATTTGGAGGTCATTGATTAGGGGGTGTTTTGCATGGTTATTAAAGGATGGCATGGAATTTTGACTGGTGAAACTAGGAGGAATAGACAGAAGGATACAAAACGTACAGAAGGAGATCCTGTATCCTGTCAACCAGACTTGAAGGATGGAAGATGAGATCTATAATATGAAAGCATACTTGGAAACAAAACTGTTTCATCATGGTTTTTAAAATATAGATATATGTATACGTGTTTGATATTATATGTAGTAGCAGAAGTTGACTTTTCCATGTTTTTTTTCTCTTTGATGTTCCCATTGGTTTTTTGTGTTTCTGTTAGACTAATCTAAAAGATTTCAAGCAAGCTTTAAGTGATTTTTTTTTCTCATACATAGCCTGTTTAGCTGTTAATACATCTAAGAATATTGTACTCATTTCACCGTTCTATTTATTTGGTGAATCTGCCAGTTCTGCTTAGGCAATATTTTTATACCTAAGCAGTAAGATAAAGGTATCCCAGGTTATACCAGCTCTGCTCCCTGTAGGAAGAATGGATAAAGTCCCAGGAGTTTTTATTAGTTTGGAAACTGACTGACAGCTAGAAAAAGCTTTTGGTTCTCTCTTAATTGTGAAATGAGTATTTTTTTTCTTCTTTGTTAGAACCAATGGAAATATGATTCTTGAACTCAGATAATCATTCTTAAGAATGGTAAATAAAAGCAACCCAAGTAAGTAAAGGGAGAAAATGTTTCTTTGTGCTTCCTACTTGAGAAATCCAGCTGCCTGCAAGCCACATGTTTAGCACATTCTCTGATTCAGACTCAAAAAAAAAAAAAAAAAGTAAAAATAGAAGGGGAGAAAACAGCAGTAAAAATCATTGCTGATTCAAATGTAAAGTTAAAATATGGGATTTTAGCTTGGATGATTTATATTAAAATTATCCAGTTCTTCCTTCAGTTTTGGCTTGGTATGTTAAGAATAATATGAATTCTGCCCTGCCCTTGAAGTTTGCGGATAAATTTTAAGCTTATTGTGCTCAACAGGGCTGCTGAGAGAAAGGTGTTAGCTATTCAAAAAGTCAAGATATTAGTAAAAGAGTCCATAAATTTAAAAGAAATAAAGGGAGCAAACTTAAAAGTGTCATTTGTGCAATAGAAGAGAAGATTGCCAACATTTTAGAATAGGGGTAAGTATTTATATGTTGGCTAAAAATAAATCTTGCTGAATCTGCTCCTGTGTATAATCATTTGGGAAAGTAGAAGTGATTACCTCATGAGCAAGATAATAAAACTATCTTCATCTATTAAATTCTGATCATTTTATATCTACTAGTTGAAAAATCCATTCTCAATAGCATACATAGTAGTACTATTTAATATTTGAGGCTTTCAGAGTCTTTTGGAGATACAGTTGTGATTACAAAGAAGTTGGATAGTTATAATGTGCTAGAACATTGCCCCAACCTTCCAACTAAAACATGAGCTATATCTAAACAGTCCTGTCCAGTGAATGTATATCTTCAAAAACAAGTCCGATAAGAGGAAATAGATTAAAAAAATCAGAGAAAAGAAAAACCAGTATGTGTGGGTTTTAAAGCAGGCGCGGTGCTATGTAAAAGCAGAAAGCCTGCTCTCCATTTCCAGAAGTATTTCAGAAAAGGATGTCTTAAGACTTCAGTCCTATCAGATTTTTTTAAAAAGAGGTTTGTTGAGTTTCCCCTTTGCTTAAGTCAGTGCCTTCTTTTGAGGAAGTGATAGAAACTCGTCTGTTCGCAAAGGCATCTGAGAACTATCTTAAGATGATACCGCTGTGTTTAAACAAATTAAAGTATTCTACATTTTCCATCAGCTGAATGTTTTATTTCTTGTGATACGTTATTCTTAATGATGACATATTTACTGGGTGTTTTCTGTCAGTTGGGCTTCCCTTGTGGGTCAGCTCGTAAAGAATCCACCTGCAATGCGGGAGACCTGGATTCTCTCCCTGGGTTGGGAAGATCCCTGGAGAAGGGAAAGGCTACCCACTCCAATATTCTGGCCTGGAGAGTTCCATGACCTGTACAGTCCGTGGGGTCCCAAAGAGTCAGACACGACTGAGGGACTTTCACTTTCTGTCAGTCACTGTGATACATGTAAAATGAAGTGTCTCGCTTAAGATTCAGATTAACCATATGAGGTATGACCTGTATTATCCTTCCTCATGTTACAAATGAGGAAACTGAGGCTCACAGAAGTTAATTTGCCCAAGGTCCTGTAGAGATGGGAAATGCATTCAGATTTGTTTGGTGCAACCTTACGCCAAATTTCCTCTAAAGCTCTCCAAAGGCAAAGGATGTAATATTATCCCATATATAGCATGTTAACAATGATAATATTAGGTATATAGAAAAACGCTCAAAAGTCTTTTTTATTTTTTTATTTATTTTTTTTTTCTAATTTTATTTTATTTTTAAACTTTACATAATTGTATTAGTTTTGCCAAATATCAAAATGAATCCGCCACAGGAAAATGATGATTAGATATCCAAATTTTGGGCAAAGTTGGTCACATTGGCCTATTCATATATTGTTGTTCAGATGCTCAGTCATGTCTTATTCTTTGCGACCCCATGGATTGCAGCACGCCAGGTTTCCCTGTCCTGCACCATCTTCCAGAGCTTGCTCAAACTCATGTCCATTGAGTCAGTGATGCCATCCACCTATCTCGTCCTCTGTCTTCCCCTTCTCTTCCCGCCTTCAATCTTTCCCAGCATCAGGGTCTTTTCTGATGAGTCAGCTCTTTGCATCAGGTGGCCAAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGGTTGATTTCCTTTAGGAAATTCATATATATAACTTGACATAAAAGATAGCTCTTTCTGCAATGGTTGAAAAAGTCAGTTTTTTAAAAAGTACAAAAAGTAATCCTCTCATCTGATTTTGTGGTAATAATAAACACCAGTATTGGTAATTACTCTTAATGTAACTTGCCTTCCTTTTCAATAATTATTATATTTTCTTACCTTTCTTAAAATGTTTACATGTATGACTTACCTTTTAGAGTCCCAGAAAGTATGCAGGGGCTAATTTCTGGTCCCTAAGTTTCTATAGAGTTTCTATCCTATGGAAAGAATAATTTATTCCAGGCCAAGGGTATATAATAGGAAGATAAGACCTGGGAATCTTCCCCCATCATTTTATTATAAAAATGTTCAAACATATAACAAAATTGACAAAATTTTATAGTAAATACCCAAATAACCAACCACATGGATTATTCGTTTTATTCTACATGTTTTATTATTTATCCATCCATGTTATTTTTATGGTGCATTTAAAATAAATTGTGACTTCTCTGGTGGCTCAGACGGTAAAGCATCTGTCTGCAATGCGGGAGACCCGGGTTTGATCTCCGGGTCAGGAAGATCTCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAAAATCCCATGAACAGAGGAGCCTCTTAGGCTGCAATCCATGGGGTCGCAGAGAGTCGGACATGACTGGGCTTCACTTTCACTTTCTTTAAAATAAATTGCAGACATCAGTATACATCCCCCTAATACTTCATTTATATTTATTATATAGTTTATTATAGTTTAGCTTTTAATTTTTTCAGTGTATATTTACATGCAACATAACGCACAAATGTATATAAATTTGATGATTTTTTTCACAAATCCATATACCTCGTGTAACCCAAACCCTATTCAAAATTTAGAACAGTACAATCATGCCAGAGAGTTTCCTCATGCCCCTACCGAGGCAGTCCCCACCTACCTCTCAGATAAAACTACTGTTCTGATTATTTTGCCTCACAGATTAAATTTGCCTGTTCTAAAACTTCATATAAATGAAATCATACAAAGTATAATGCTTCTTTCACTTAGCATGTTTTTAAGATTAATTCATGTTGCCTGTATCAGTGGTTCATTTCTTTTCATTGCTGAGTATTGTCTTTTTTTCCACTTTCCTGTTGATGGATACCTGGGCTGTTTACAATTTTTTTTTTTTTGATATTATGAATAAAGCTACCATGAACATTCTTATTCAAATTGTACGTGTGTGTGTAAATACATGTCTTTATTCATCTTGAGTAAACATCTAAGTATGAAATCATTGGGTCCTTGATTAGGTGTATAGTTTCATAAAAAACTGCCAGACCTTTTTTCCAAAGGATTGTACCATTTACATACCTGCAACCATGGGGATTTCCAATCGCTCCACATGTTCTCCAACCTTTGTGCTTGTCAGTCTTTTTCATCTTAGTATTTGTGGTGGGTGTATTATTTCCAGTCGATACTTTGACTATTTCTACTTGTGCCTAGTAGCCCTCTTGTCGGATCTACCCCTTTATCCTTTTTAATACCACCTCCTGCTAGGAACTGCTGAAAACATTTTTTCTCTGTGATAATAGTTAAGAAACCCAAAACTCAGCTTGAGTTATTCTTTCTCAAACATGGAATACATCACTCACCAAGGAACTCTTTTTCCTATAATGAAGACCAACGTCTGAGAAAAAACCTGAGTTGTTGAAGAGATGTTTTAGACTTCCACATGACTGCTGGTACTGGTCAGGATGGCACCAAAACACTGTAATAAAACAGAATATGAGCTTTTCCTGTAACAGTTACCAGTTCATGTTATTTCTAAGTCAGGTGAATTTTTGACGCTAACATGAAAGCATATTAAACAAGCTGTATGCTTTCCCCAACAGCTATATTTGGTGTGGTTTAATTCATATTTCCTTATTAACTAATGGCAGTAAGCACATTTTCATGTGTTTGCCCATGTGTAAATTTTTTATTTTCTAAACAAGTTTATTGAGGTATAATGTATATGAAACCATCACCACAATCAAGATAATGAATACATCTATCACCTCAAAAAGTCTCCTCTTGCTTCTTTGTAATCCTTCCCTCCTGCTTCTCTGGGCCCCCTCTC EMBV3_22673 GGTGCTATTTGGCTTTCATTCCCTGCCTTTGAAGAACCAGTGTCACCCCAAACTTCCCCC Gene GeneID:768053|AP1S1:NM_001077110:341_cdna Constitutive 0 NULL GeneID:768053 25 GENE AP1S1 MGC139079 adaptor-related protein complex 1, sigma 1 subunit EMBV3_30980 CTCTTCTCATGGAAAGTGAGCCAGATGTGTCCTGAGGCTAACCTGACAGCACTTGGGGAA Gene BVT0102_323115 + 0 NULL GK000022.2:49008504-49019726 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05700 GCGCTACTCAGCGACTAAACAGCAGCAATCCTATATGCGGAAGCTGGGAGTTGATTGGAA Gene BVT0102_072986 - 1 EMBV3_07630 GK000007.2:102713081-103689128 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218212 TCONS_00218215 TCONS_00218216 TCONS_00218217 TCONS_00218222 TCONS_00218219 TCONS_00218221 TCONS_00218213 TCONS_00218214 TCONS_00218218 TCONS_00218220 1 XLOC_131650 Coding TCONS_00218212 XLOC_131650 Coding Coding SLCO4C1 7:103686162-103751569 j TSS162288 4712 1 TCONS_00218212_4 530 0.114601018675722 12 0.928141149130049 0.000701278658991134 1.89776119258107e-07 0.000139102260129089 5.26027161664478e-14 2.39101798506309e-05 3.75319349627509e-05 0.000181201502067432 6.64824208411161e-05 9.74507960190955e-05 3.36248101411905e-05 2.50595414460079e-09 8.34336732676678e-06 1.52937412224705e-06 4.50325761600533e-16 1.71597686199675e-06 0.000258852645337356 0.000650007667862892 0.000988951857479501 0.000293810087141594 0.000778195469776306 7.9574793161361e-05 0.000151270959085471 0.000139425383972491 0.000386096913178264 2.95375052092537e-31 0.00050781108167037 0.000355045315139307 1.00037157733609e-11 1.0003986900186e-12 4.64502153566468e-07 XM_005209756.1 SLCO4C1 PREDICTED: Bos taurus solute carrier organic anion transporter family, member 4C1 (SLCO4C1), transcript variant X1, mRNA. 0.0 3076 100.00 0.361629881154499 NM_180991.4 SLCO4C1 Homo sapiens solute carrier organic anion transporter family, member 4C1 (SLCO4C1), mRNA. 0.0 1802 82.08 0.382427843803056 TCONS_00218212_4 sp|Q8BGD4|SO4C1_MOUSE SO4C1_MOUSE Solute carrier organic anion transporter family member 4C1; 0.0 814 76.05 0.986792452830189 3 coding 0 0 0 0 -0.473306660608178 0.160554630533275 -0.106743170876492 0.109489772350934 AGCACACACAAGTCAATATGCTAAGTACTATCTACCTTTTAAAAGATACTTGCTTAACAGCAAAGAATAAAGGCAGCTGTAGCACTTCAAGTTCTCCACTTTTCTACTACTTGTATGTCTTTATTTTGGGACAACTGTTCCTGGGAACAGGAGGAACTCCTCTGTATACCCTGGGAACAGCCTTTATTGATGACTCTGTGCCCATCCACAAATCTTCTCTCTATATAGGAATTGGCTATGCCATGTCAATTTTAGGCCCTGCTGTTGGCTATGTGCTGGGAGGACAATTGCTAACCCTGTACATTGATGTTGATTTGAAACACAGCATTGATATCACTGAGGATGACCCTCGATGGCTGGGGGCATGGTGGATTGGATTTCTTATATCTTGGCTGCTTGCTTGGTCTTTGATAATACCTTTTTCTTGCTTTCCAAAACATTTACCAGGTACAGCAAAAATTCAAGAAGGAAAAGTTTCCCAAACTCATCAGAGTGCTTCCTTACAAGCTACAGATGGTAATTTTGGACAAAGTTTTAAAGATTTTCCAGCTGCTCTAAAGAATTTGATGAGGAATACTGTCTTTATGTGTTTAGTTCTATCAACTTGTTCAGAAGCCTTAATTACTACTGGATTTGCTACCTTTTTACCTAAATTTATAGAAAATCAGTTTGGATTGTCTTCTAGCTCTGCAGCTACTCTTGCAGGGACTGTTTTAATTCCTGGAGCTGCTCTTGGTCAGATTTTAGGTGGTGTTCTTGTTTCGAAATTCAAAATGATGTGTAAAAACATAATGAAGTTTGCTTTGCTCACATCTGTAATTTCACTTGTACTGACTTTTGTGTTTGCTTATGCCAACTGTGAAAATGAGCCATTTGCGGGTGTGTCTGAATCATATAATGGGACAGGAGAACTGGGAAACTTGACGGCTCCTTGTAATGCCCACTGTAACTGCCTGCGATCGTATTATTATCCCGTGTGTGGAGGAAATGGAGTCCAGTATTTTTCTCCCTGCTATGCAGGTTGTACACAATCTGTTTCCAAAATACATCCAAAGGTATATTATAACTGTTCATGTATTGAAGGGGAAATTCATATAACACCTACTCCATCAAGTGTTAGTCTTGAAGCTCAAGCTGGAAAGTGTTCAAGTCAATGTAAAAACTTGCCCCCATTCCTTGGTGTTTTCTTTGCTGCAATTGTTTTTACCTTCATGGCTGGTACTCCTATAACTGTGTCCATCCTAAGGTGTGTTAATCAAAGGCAGCGATCTCTAGCATTGGGAATACAGTGTACATTGCTTCGATTATTAGGCACCATACCTGGACCTATTATATTTGGCAGCACAATAGACAGCACATGTATTCTCTGGGATATTAACGAATGTGGAAATAAAGGAGCTTGCTGGATTTATAATAACGTCAGGATGGCCTATATGCTAGTGGCCATAAGTGTTATTTGTAAAATTATCACTGTTTTCTTCAATGGACTTGCAGTCTTTTTGTATAAACCACCACCATCAGTCACAGATGTGGCATTTCAAAATCAGAATGCAGTTTTGACTGCGGTTTCATTAGAATGTGATCTCAACAAAGCAGGGAATGACGGATGAAACAGCAAAAGAGAAGATTGAAAATCGGCCTGCATTTGTAAGAATTCATGTTATCACTGCAGCATTAACTATCCAATATGGGCAATCATATTTTAGAAACTGGTTTTTTATAATTAAATGTTTTTCTTTTATATGTATGAACTCTGAATTTGTTTTTGTTTTAATATAAGAAACAGACCTGTGCCTTCAAAGCCCATCAAAAGCGTCAGAACACACACACACACACACACACAGATGAAATCCCCAGCTAATAAACAATACTAGAAAGAAAAAGCCAATGTTTGCTTAACAGTTTACATTTTAAAACCAAAGTGATGTTTCTATCCCTCTTACAACTTGTTTTATTTTAATTATCATTGTCAGTAGTTTGGCCTTTTTAAGAAAATTCATGGTGTAAGAATTTAAATATATCTAGTCTAAGTTCTAAGTTTCAAGAACTATTATTGAAAGAACATGAATTTAAAACCATTTAAATAATATTATTTGTTTTTACATTTATATGTACTAGTCTGTCCTTGATTTATTATAGACAGTTAGTGAACTGTTAGAGTGTGGGTTACTTATCTTTTTTGTGTCCCAGTACATAGTGCATTCAGAAATATTGGCATTCTATACACATATCTTCACTTTAACTCAAGAATTCCAGGAAGTGATTTGTTGATATTGCTGATTTTTAACATTTTTATTATTCTGTGATAGTATTATTCAGTTCCATGTCTTCCAGAGGAAGGTGCCAGCTTCAGTAAAGTGCCAATTAGATAGGAAAAGATTTCTTTTTTTTAAAAAAATGGCTTATGTCCATTTTATTGATTTTCTTTAAAAAGCTTTCTTCATGAACTATGATCAGTGTTTATATACTCAGTAGCTCAACTTTTCTCGTTTGAAAAACAGATCACCTAGTACATTACTTAGCACATAAGCAGTGCTTTGCTTATAGTAGGCATGTATTATTGTTTGGTTAAAACATTAAACTGTACTTTTAACTAATCTGTGTATTTAAAGATTAAGTATTTCACATATATAGCATTATAATTCCATTTTTTCAGCTCAGACTTCAGCCAACTTTGTGTACTCAGAATTGTGGAGGAAATACATCAGTAAACATCAATAGAAATAACTTCTACCTGGTCAAGAACTTTACTGATTAAGAAAATTATTGAAGTTCATACCCATTTGAAATTTCATAAAATAAGGTTACTGGTTTGATAAGACTCATTATCAGCTTTTTCCTAGGTTAGCTGTTTACAATCAGTGTTTTATTGAGTAACAAAATGGGTAAAGGCCTGATAGGAGACCAGGATCAGAAGCACTAGTAATTCACAGAATTTTGAAGAGTTATATTTTGTGGTAATTGGTGGCCAGAGGCGATTCAAGAATTGAGTAGCATTTATAGATTGAGATGCAAGGAGTGAATTTGAAGTGAGGCAAGCAAGCACACGTGAATATCAGGGAATTGGAGGAGCAGTGGGTCACTCATCAGAGAGACAGATCTACTTAAACTAGGAACACGTAAGCGCCAAAGGCTGAAGCCAGAATGGGTGGTCAAAAACCCACGTGCTTGAGAAACAGGAAATGCGTAACAACCAAAGAGACAGTTCACAGTAGACAGGGGAACAGACACATGATACTCCCAATTCAGAAGCAGTCTCCCTCCTACCCAGCCACACACACACATTTTAGATTATTTTTTTAGTTTGGCTGTGTGGGTTTTCATTGCTGCTCAGGCTTTTCCCTAGCTGCTGGGGGCAGGGACCACTCTCCAGCGGCAGTGCTCAGGCAGGGACCACTCTCCAGCGGCAGTACTCAGGCTTCTTGTTGGGGTGGCTTCTCTTCCTGCAGAGCATGGCCACCTGGATGCACTTAAGTACTGCAGATCCAGGATCTAGAGCAGAGGCTCAACAGTTGTGGTAGGCGGGCTTAGTTGCTCCGTGGCATGTAGGGTCTTCCCGGACCAGGGATTGAACCCATGTCACCTGCATTGGGAGGCAGGTTCTTTATAATGAGTCACCAGGGAAGCACCACTCAGACACATTTTAAGTGTTTCTTAGAGGTAAGTCTAAAGGGAGATTTTAGGCTTTTTATATCCTATGTGTGGGGCTTCCACAGTGGCTGAGTGGTAAAGAATCTGCCTGCCAATGCAGGAGACTTGGGTTCAATCCCTGGATTGAGCAGATCCCCTGGAAAAGGAAATGGCAGCCCACTCCAATATGCTTTCCTGGAAAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCAAGGGTGTCACAAAAGAGTCGGGCGCTACTTAGCGACTAAACAGCAGCAATCCTATATGTGGAAGCTGGGAGTTGATTGGAAACATTTTGTAGATGTAAAATAATGGCAAATCCTCAAAAACTCATTTATAGAGTGGAAACAAAAACTATAAAATGTATTAGTCTAAAGCCACTTGAGAGAAAAGAAAAAAATCACTCTACTCATAGAAATAGTTGAATGAATAAGTCACTAAATGATTGGCATTCACAATGATTTTTAGTTATAAAGGGTTTCATTGTGTTCAGCATACTCAATTTTATTAGACGATAAACATTTTACAAAATTTGTAATGAAAATGATTAAAGTGAAAATAATTTTGGCACTTCTGAAAGAAGTCAGACTCATTTATAACATACATATTTACAAAGAATACCTCCTCTTACGCTAGGGCAATATAGACACTACTATAATTTTTAAACATTATTTTTTTGAAGTTACCTAGATTATATGAATTAGTATAATGCTACTTTTAGAACATAATTTTTTATAATATGTATTTTTCACAATTTATAATGATTTTTAAATTTGTAATTTGGTGATTTTTTTTGTACATAATTGAAGGTATGTCAAAATTTAACATTTGAATTTTCTTAATTGTAGGAAATACAAATGTAAAACCTTTATATATGGAAGGAATTGTACAATTGTTTAGCTGTATAAATTGGAGGAAAATGCAAATAAAATTTTAGCTCTATTTTTTCAGTTTTTATTATAAATAATTATGTGAAAACTATATATTTTAAAATATCAATATGTTTGTACTTGTTTAAGTGTTTAATCTTATTAAAGTCACAGATTTAAAAAT EMBV3_23480 GCAGCGTGCAAACGCAAAGAGCAAGAGCCCAGCAAGGACAGGAACAATTCCCAGAAGAAA Gene GeneID:782542|ONECUT2:XM_002697832:520_cdna Constitutive 0 NULL GeneID:782542 24 GENE ONECUT2 NULL similar to one cut domain, family member 2 EMBV3_07883 CCTCTTCGACTCATTGAGCCAGATGCTGAGGGTGATCCTAGAGAGCGATCCCCAGCAAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05165 GCTCCTGGGGTCCTTCTAACTCCGCCCGCGCCCTTAATTTAAATCGCTGTATACTGTATT Gene GeneID:617830|POU3F1:NM_001105451:313_cdna Constitutive 0 NULL GeneID:617830 3 GENE POU3F1 MGC148527 POU class 3 homeobox 1 EMBV3_30207 GTGGTCGTCATCACCTTATTCTGGTCCAGGGCTGGTGGCAGCGCTCTCTGTTACCCTGGC Variant GeneID:509812|TMEM107:NM_001083657:9_cdna 150^217 1 EMBV3_34994 GeneID:509812 19 GENE TMEM107 MGC157051 transmembrane protein 107 EMBV3_09664 CTTCTCCCAGGGGCCACAGACCCAGTTCTTCCAACACCCACAGCCCCAGTTTCCATACCT Gene GeneID:528414|NOBOX:XM_002687136:510_cdna Constitutive 0 NULL GeneID:528414 4 GENE NOBOX NULL NOBOX oogenesis homeobox EMBV3_18640 GGGCACTCCCAATAATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAGTAC Gene GeneID:281061|CDK1:NM_174016:7_cdna Constitutive 0 NULL GeneID:281061 28 GENE CDK1 CDC2 MGC134454 cyclin-dependent kinase 1 EMBV3_40485 ATGTGGGACAGCCTCGGGGAGGAACAAAAGCAGGTATATAAAAGGAAAACGGAAGCTGCC Gene GeneID:539135|TOX3:XM_002694777:574_cdna UTR3_Alt 2 NULL GeneID:539135 18 GENE TOX3 NULL TOX high mobility group box family member 3 EMBV3_42724 GCCTAACCTTGTAAGAAGTCTATTAAAGCCAGTTCTCTCGGGTGTTGTAGCAAACAGTCC Gene BVT0102_128277 + 0 NULL GK000017.2:54325985-54330420 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077312 TCONS_00077311 1 XLOC_047043 Coding TCONS_00077312 XLOC_047043 Coding Coding TMED2 17:54328869-54338506 = TSS57826 2330 1 TCONS_00077312_3 201 4 0.758613532586135 0.00113795026650149 0.00111771184830241 0.0010486509701764 0.00054066563107944 0.000488022458858485 0.000875626346424576 0.000550597715739476 0.000368488323031984 0.000921576465329466 0.00235533688236365 0.00172508628087044 0.00151339176827792 0.000222942759160894 0.00119783939949933 4.31618614410183e-05 0.0583730876161806 0.0398322941028428 0.108335924546708 0.0010586224199136 0.000897757469625858 0.000242652468929783 0.0258191354462949 0.0448075252360261 0.0392074380983468 0.00103950374248365 0.000411395279151856 0.00101412925876424 0.00702187603196972 0.00296409369756223 0.00466101493828103 XM_005217724.1 TMED2 PREDICTED: Bos taurus transmembrane emp24 domain trafficking protein 2 (TMED2), transcript variant X1, mRNA. 0.0 4042 99.08 0.971673819742489 NM_006815.3 TMED2 Homo sapiens transmembrane emp24 domain trafficking protein 2 (TMED2), mRNA. 0.0 2165 82.28 0.900429184549356 TCONS_00077312_3 sp|Q9R0Q3|TMED2_MOUSE TMED2_MOUSE Transmembrane emp24 domain-containing protein 2; 3e-148 415 99.50 0.995024875621891 1 coding 0 0 0 0 -0.00755342272781316 0.970267206111026 -0.0181823214669508 0.713064606577768 GTGGCAGCTACGGGCTCCCGCCAATCCGCGGCGCCCGCATCAGCCCCCTAGGGTGGCGCAGCCGGAAGGGGCGGAGCTGAGGCGGCGGCGGCTGAGAAGGCAGCGGTGGCGGCAGCGACGACGGCGGCTCTGGAGGCCGCAGTCCCGGTCCTGGCTTCGGCCCCAGCCCCACCATGGTGACGCTTGCTGAGCTGCTGGTGCTCCTGGCCGCCCTCCTGGCCACGGCCTCGGGCTACTTCGTCAGCATTGACGCGCATGCAGAGGAGTGCTTCTTCGAGCGGGTCACCTCGGGCACCAAGATGGGCCTCATCTTTGAGGTGGCCGAGGGCGGCTTCCTGGACATCGACGTGGAGATTACAGGACCTGATAATAAAGGAATTTATAAAGGAGACCGGGAGTCCAGTGGGAAATACACATTTGCTGCTCACATGGATGGAACATATAAGTTTTGTTTTAGCAATAGGATGTCTACCATGACTCCAAAAATAGTGATGTTCACCATTGACATCGGGGAAGCCCCCAAAGGACAAGACATGGAAACAGAAGCTCACCAGAACAAGCTAGAAGAAATGATTAATGAGCTCGCAGTGGCGATGACAGCTGTGAAGCATGAACAGGAATACATGGAAGTTCGAGAGAGAATACACAGAGCAATCAATGACAACACAAACAGCAGAGTGGTCCTTTGGTCCTTCTTTGAAGCTCTTGTTCTAGTTGCCATGACATTGGGACAGATCTACTACCTGAAGAGATTCTTCGAAGTCCGGAGGGTTGTTTAAAAGCCTTTTCCCCATAATCCCAAATTCATAATTCACTGTTTACCATAATAATGTCATTAGTTTCTATGTTTTTATTTTCTGAACTATATCTTCACAGCTTGTTTCTTTGTGATTAATAGATACTGGGGGAAAACACTTTTTTAGGAAAGCTATAGTGAAAATTTGACATTTGATTGGCATAAATTCATATTTGAATTCTGCCTCCATTATACAGGCCCTCCCAAAACTCAAACACTATAAGCCGAATATAGGTGTAGAGTCCTTAGTTTTCTTTCCTTTTATTTTCATTATAAAATACAGTTTGTTCAGGATAGTACTTTACTAAAAGGACTCTCTTCTTGGGATCCCTTATCCTACAGTTCAGGTCATTAGAAAGATTCATTTTGTTGAGAAACAACAATCTGAATCTTGACATTTTCTATCCAGCTTGATGGTAGAGCTCTGTGACTAGAGTATGTGACCAGGTTGGTACTTTTATACTTTGTCTATCTTGTTTTTGCTTTAAAGATAAGACTTAAACCAACAACCTTTACCCACCCCTCCAAAGTTTCACTTTGAACCTTAGAACTCAATCACCTCCACTTAAAATTGTTGACACAAGCAGCTAATAACCATTTTTTGGTTTCTGCCTAACCTTGTAAGAAGTCTATTAAAGCCAGTTCTCTCGGGTGTTGTAGCAAACAGTCCACTCTGCTTATGCATGAGAACAGTGAAGACATGACTTTCCTTTCCATGCTGGCGCATCCACCTTCTCTACTCTTGGCATGTAGGAGGTATGCATTAATGTAATTGGAAAAATCTGGATTTCCGATGCCAAAGGGTTAAAGCCTCTTGGATTTCTTTGCGGTGATTTGCAGCCACTATTTTATTTTTGATCAGTGGCATTTTGGCCACTGTTTAATTAGGGTACTGAACATCACTGTCAGTACTAGGGTTTTTGTTTTTCTTGGGTCTTTTTTGGCACATGTGAATTTTGTTTTGTATAGAACGAAACGACTTTCTTTTGGTCTCTGATAATGGGTTTAAAAATCAAGGAGCATCTGGTTTTATTGTGGGGATGATCCGGATTATGTTGTGACTGATGTATATTGGTTACTTGTACATTTTTTTTTGGATCTTTGCAAGGGGAAAACTACAAGTAACGAGTTTTGTATAATTAAATTTGTTACAGGTTTTCATGTTCAGGGTAAACAATTTTTCAACCTTGGGTGAAAATACTTGCAACAGTTTAAGGTGACTGAGTTTTATCTTAGGACAACTGTTGCATGCCAATTTGTGTGCGTGTGTGTGTGCAAACACTTCAAAATTGAGTTAAAAGATGTAAATTTAAAATTGGTTGTGTATCTGATCTGCCCCAGGTTCAGTAAATAAACAGTTCTTTTTAAAAACAGTCTTGGTATTCTGTGTTTTATATATTTATGATTAATTCACATTTGTTAAATACCAGCTTTCTAATCAAAGCTGAAATGAGACGTCATGTTTTCCCAGTAATGATGCCTATTATAAACATCTGTTACTTTTTATGTCTGTAAACTTGATAATAGTAAACAC EMBV3_39129 CTCTACTTGAGCCTGTCCTTGTAAACGTGGAGATGTATGCGTGGCTTCACTGGTGATGTC Gene BVV0102_214252 + 0 NULL GK000024.2:56817505-57125860 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26960 CTGTGTGAACTTAAGGACGTTGCTTCTAGATGGAAATCCATTCCGCGTTCCTCGAGCAGC Gene BVT0102_063174 + 0 NULL GK000003.2:75301704-75355802 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170298 TCONS_00170292 TCONS_00170301 TCONS_00170299 TCONS_00170297 TCONS_00170295 TCONS_00170302 TCONS_00170303 TCONS_00170300 TCONS_00170296 1 XLOC_103551 Coding TCONS_00170301 XLOC_103551 Coding Coding LRRC40 3:75294027-75334094 = TSS127279 3246 1 TCONS_00170301_1 602 15 0.919358059202316 0.00115736136136699 0.000773388204328454 0.000872113129582635 0.000593421470510679 0.000574938893352272 0.000327004089024832 0.00041403244386391 0.00065253771645591 0.000827670447629879 0.00119374131989961 0.00157097319858402 0.000689939179614785 0.000112762100415011 7.69670906184096e-06 0.00036053528311664 0.00262047512690445 0.000723808610898625 0.00335996604682148 0.000598898883637566 0.000932883812507227 0.000395190367907183 0.000744305499381978 0.00201691011868255 0.00181250173932775 0.00130574797328034 0.00163934698740545 0.00100302396288709 0.00066542286775964 0.000189931766914715 0.00059494753694556 NM_001103262.2 LRRC40 Bos taurus leucine rich repeat containing 40 (LRRC40), mRNA. 0.0 5855 100.00 0.999691928527418 NM_017768.4 LRRC40 Homo sapiens leucine rich repeat containing 40 (LRRC40), mRNA. 0.0 2412 89.32 0.561922365988909 TCONS_00170301_1 sp|Q9H9A6|LRC40_HUMAN LRC40_HUMAN Leucine-rich repeat-containing protein 40; 0.0 1098 91.69 0.998338870431894 5 coding 0 0 1 0 -0.0788486376950638 0.552882341008549 -0.0193927348258543 0.688021412526583 GGCTTTGAACATGTCGCGGCTGAAGGGGATAGCGGGGCGGGATACCCGAGCGGGTTTCCGAACTGAGAGCAGAGACTGCAGTGCCTGCGTACCCCAGGGACTCTTAAAGGCGGCTAGGAAGAGCGGCCAGTTAAATCTGTCGGGCCGCAACCTCAGCGAAGTGCCTCAGTGTGTTTGGAGAATAAATGTGGATATCCCTGAGGAAGCTAATCAGAATCTTTCATTCAATGCCTCTGAGCGATGGTGGGAGCAGACGGATTTGACTAAACTAATCATATCAAATAATAAACTTCAGTCACTTACTGATGACCTCCGACTCCTTCCTGCACTGACTGTTCTTGATATACATGATAATCAGTTGACATCCCTTCCTTCTGCTATAAGAGAGTTAGAAAATCTTCAGAAACTTAATGTCAGCCATAACAAGCTGAAAATACTCCCTGAAGAAATTACAAATCTAAGAAATCTGAAGGGCCTGTATCTCCAGCATAATGAACTCACTTGCATACCAGAGGGGTTTGAACAACTTTCCAACTTAGAAGATTTAGATCTTTCAAATAATCGTCTTACAACTGTTCCTGCTAGTTTTTCTTTTCTATCCAGCTTGATGCGTCTCAATCTTTCCAGTAATCAACTGAAGAGTTTGCCAGCAGAGCTAAGTGGAATGAAAAGATTAAAGCATTTGGATTGTAATTCAAATCTCTTGGAAACTATTCCTCCTGAATTGGCCAGCATGGAATCACTAGAATTGCTATATTTGAGAAGGAATAAATTACGTTTTCTACCAGAATTTCCTTCTTGTAAACTATTAAAGGAATTACATGTAGGAGAAAACCAGATTGAAATGTTAGGGGCAGAACATCTTAAGCATCTGAACTCTATCCTTGTGCTAGACCTGCGGGATAACAAGTTAAAATCTGTTCCAGATGAAATTACACTCCTGCAGTCTTTGGAAAGACTTGATCTAAGCAACAATGATATTAGTAGTCTGCCCTGTTCATTGGGAAGACTTCATTTGAAATTCCTGGCACTTGAAGGAAATCCTTTGAGAACCATTCGAAGAGAAATTATAAATAAAGGAACCCAAGAAGTCTTAAAATACCTACGAAGCAAGATTAAAGATGATGGACCTAGCCAAAATGATTCTGTTATTGAGACTGCCATGACGCTGCCAAGTGAATCTAGAGTCAATGTGCACACCATCATCACATTAAAAATGTTAGACTATAGTGATAAACAGACAGCTTTGATTCCTGATGAAGTGTTTGATGCGGTAAAAAGTAACATTATCACTTCGATTAACTTCAGTAAGAATCAGCTGTGTGAAATTCCCAAAAGGATTGTGGAACTGAAGGAAATGGTTTCTGATGTCAATCTCAGTTTTAATAAGCTTTCCTTTATATCCTTGGAATTATGTACACTTCAAAAATTGACTTTTTTAGATCTCAGGAATAATTTTTTAAGTTCTTTGCCTGAAGAAATGGAATCTTTGACAGGGCTACAAACAATCAACCTTTCCTTTAATAGGTTCAAAATACTACCTGAAGTTTTGTATCGAATTCCCACACTTGAAACAATTTTGATTAGTAATAATCAGGTTGGATCTTTGGACCCTCAGAAAATGAAGACAATGGAAAATCTGATCACATTGGACCTTCAAAATAATGACCTCCTACAGATTCCACCAGAGCTTGGTAACTGTGTGAACTTAAGGACGTTGCTTCTAGATGGAAATCCATTCCGCGTTCCTCGAGCAGCCATCTTAATGAAAGGAACAGCTGCTATTTTGGAGTATTTGAGAGACCGAATTCCTACTTAAATTGAAGTCATTACATAGTCTTGGTCATGTTAATTCTTAGACTTCTTAAATTGATAACTAACATTTTTCTAAGGTATTATCTTCATTTATGATGGTGTAACCACGTATTGTGTTCATTTGTTCTAAATGTTTTGCATAAGATTTATGCAAAAAAAAATTCCCTCATTCCCACATAGCAGACAGTTTCTTCAAAAGTGAATTTTTATTTATTATAGTTAAATATTTTTATAATGACAAAGCATTTTTGTAGCGATGGATTTTTTTTCCCATTTCTACTGTGTTACGTATATTATGACCAACTGACTTGAATATGACCATCCAATTTCTATGTTTTCTTTAAACTTATGTTTTAATTTCTAAATTTTCATTGACTATACAATTGAATTGAATTTTATTTAATACTGCTCTTTGGCATTAAAAAAAAATAAGGCTTTTCATTATCCATGATAAGACTTTTGTGATATGGTTGGTATCAGTATAAGTTTCAAATTAATATTTATTGTCTTGTTTTGTTTTAATATAGTTGAAATGTTTTTTCCTAGTCTTTTTCCCATGTTTCATGAAATCATTTTACCGGGGTTTCTAATGTCACAGAAATGGTTCACAAGATACAGTTATTGGTGGAGAAAATAGTAAAAGTGTTTTAATTGCTCTCACAATTTTGAATTTAAAACTTGATTGGACTTTTTTTTTTTAAGATGCTTTAGTACTAAGTTTCCATACAACAACCTAGTATTTCTAGATTCAACACATTTAAAGAAATTAGGTCTGCATATTTTTCCCTCAGAGTGTGAGCATTTAAATGATACCTTCTGTTCTTTAAAAAAAAATACTGAAATTTTATTAATTTTATAGATAACAGCAACAGAAAATAAGAGCATATACTGCATAGAAATCTTAAAATGTGTTTTATTTAAATACTAAGCAGGTACTTGTATGTATAATTACTCTGTTGATGTGCTCTGATCTTTCCTTGTTCATTTTTTTTAAATTTCCAAGGTCTTAATTTTTAAATTTGCTAGTAACGTTAATAAGACTAAATTTGTAGTCATGCGGTAATTTTCTAAAAAGTAATTTGTTATAGATGAACTGGATTTAATAAAAATTAAATATAAACATTTGTATTTACACCAAAAATATCAGAAGTAGGCTAGTCAGTCATTATAAAATGTACTATGTGATTCTGTTAAGTAACCAATTGATAGACCGTATTAACTAGTTTATATAAATAGATGGGTGGACAGGTAGGTAAGTAGATAATGGATGGATAGATAGCTTTTGGGTGAGTGAGACATAATCATATAATGAAAAAAATCATTGCTAATAAAGATAAATACTACATGTTCATTAAAAAGTTACATTTTTCAAATATTGATTACAATGTTTATATGTTTTTGGTTTAAAATAAACATTCCCTTTTCATACAA EMBV3_13110 GTCTGTATCAACTGGAGAAAGTCTGACCTCCCTGCCCGGGAAAAGGCAATGCTGGAATTT Gene GeneID:514189|LOC514189:XM_002689727:76_cdna Constitutive 0 NULL GeneID:514189 8 GENE LOC514189 NULL hypothetical LOC514189 EMBV3_22971 GCACACGTGAGAGATCACACTGGAAAGGCGCAGTATGAATGTAAGGAATGTGGGAAAGCC Gene GeneID:530004|ZNF699:XM_002688773:106_cdna Constitutive 0 NULL GeneID:530004 7 GENE ZNF699 ZNF791 zinc finger protein 699 EMBV3_33032 TGGCAAAGGCGGATAAGGTGCGCTATGATCGGGAAATGAAGGATTATGGACCAGCTAAGG Gene GeneID:613729|HMGB3:NM_001076285:107_cdna Constitutive 0 NULL GeneID:613729 X GENE HMGB3 MGC133786 high-mobility group box 3 EMBV3_16172 TGAAAATTCACAGCATTCCCTTTTGTCCTGAGTGAACCCGCGCCTTAGTCCTCTCCACGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31912 TCTGGAGCTGGAGAAGGAGTTTCACTACAGTCGCTATATCACCATCCGGAGGAAAGCCGA Gene GeneID:618679|CDX2:XM_002691857:152_cdna Constitutive 0 NULL GeneID:618679 12 GENE CDX2 CDX-2 caudal type homeobox 2 EMBV3_16571 TGGGTTCCGGATTGCTGAGATTTTCATGCGGCTGCCAGAAAGCTGGCCGCTGCCACCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13949 AGACCAGAGACAGTTGTCAAGAGACTGAAAGCTTATGAAGCCCAAACAGAGCCTGTCCTG Gene GeneID:281613|AK3L1:NM_174237:41_cdna UTR3_Alt 2 NULL GeneID:281613 8 GENE AK3L1 AK3 MGC137322 adenylate kinase 3-like 1 EMBV3_00600 GGACAAAGGAAGTGACCACAGAGGCAGGTGGGGAGATGAGAAGACAGATCCTACTGTTCT Gene GeneID:617914|MAFF:NM_001103300:103_cdna Constitutive 0 NULL GeneID:617914 5 GENE MAFF MGC179538 v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian) EMBV3_04887 ATAAGTTTGGACAGTTCTGTACAGTCGGGAACGAGGAAATTGAGATGGCGCGCATGGCTG Variant GeneID:767847|PMPCA:NM_001076964:223_cdna 279^536 3 EMBV3_01018 GeneID:767847 11 GENE PMPCA MGC139568 peptidase (mitochondrial processing) alpha EMBV3_16583 GAAGGTTTCCTTTTGGCGCTGACCCAAGGCAGAGAGATCCAGGCTCAGAACTCCTTCTCA Gene GeneID:508132|NAGK:NM_001034314:8_cdna Constitutive 4 NULL GeneID:508132 11 GENE NAGK MGC127109 N-acetylglucosamine kinase EMBV3_37519 ACAGAATGCTGCAACACAGGGCTCATCATACTTGTTTGATACAAAGTTCATTTTCCTTTG Gene GeneID:404135|LAPTM4A:NM_205799:48_cdna Constitutive 1 NULL GeneID:404135 11 GENE LAPTM4A MGC128857 lysosomal protein transmembrane 4 alpha EMBV3_21722 CTGCTGTTTTAATGGATGTAGACCATCTGGAGAAGTCAGGAAGAAATGCCCATAGGGAAG Gene BVV0101_038499 + 1 EMBV3_09655 GK000016.2:65940678-65994214 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069956 1 XLOC_042104 Coding TCONS_00069956 XLOC_042104 Coding Coding - 16:65989208-65990014 - TSS52057 712 1 TCONS_00069956_2 126 2 0.118012422360248 0 0 0 0 0 0 0.000180193247330985 0 0 0.000109796815079619 0 0 0 6.60673549954321e-05 0 0 0 0.000740040569983816 0 0 0 0 0 0 0 0 0 0 0 0 XR_228132.1 LOC101910034 PREDICTED: Bos taurus uncharacterized LOC101910034 (LOC101910034), 0.0 1043 100.00 0.810393258426966 0 coding 0 0 0 0 0.043610957366007 0.761001787225231 -0.000706622051337126 0.990330553035263 TGTTCCATGAACCCTTAACAAGTACTAATTTATTTTGATAATTAACCTACATATTCTGATTGTTTACAAATCTTGTGTACAATAGATGCTTCATAAATGTGTTTCTATTTTGATGAGAATGATTTGTCAATTGCAGTATTCAAGGACACAATGTATAGGAGCCCTTCTCTTCAGTACCACACCTCAGACGTGGAACTAAGTGATTCAATCAATGTGAATTTATTCATTCATTTCCAAGAAGGAGTCACTGAGCCTCCAGAACAGTCAGGAAGCATTGCAGTTCAAGATTTAAGAGAAGAAACTTCTGGTTTGGGAGACAGTGAGATGACAGTGGTAGTCAGAGCTTGCTCCCTCTCCTCCACTCCCCTAATAATTCCCAAAGGAAATCTTATTAATCTTCAGGAGTTTCTCTTAACTCCCAGTAAGAAAACACTTCTGGTAAAGAACTACACCTTAAAATCCTATCTGCTGTTTTAATGGATGTAGACCATCTGGAGAAGTCAGGAAGAAATGCCCATAGGGAAGACTGAAGACTATTAAATTAAAACCTTGGCCTCTTATACTTTATGTTGTCCAAAGGCCTTTGTGTTCATGGATTTCTTTACTACTCCAAGAACTGTACTACGGAAACCAGCATGGGGTCCCTAGTCTAAAATCAATGTATTTCATGTCAAAATATGTGGTATTACGCAGAAGCTGCCTTTTTTTTCCC TCONS_00068018 TCONS_00068019 r 5' 1770 TCONS_00068018 TCONS_00068019 r 5' 1464 EMBV3_43544 CTACAGCCACGTGGTGCTCAAGGAGGTGCGTTTCTTCAACCTGCAGGTGCTCTACCCGCT Gene GeneID:538464|CHST6:XM_002694727:40_cdna Constitutive 0 NULL GeneID:538464 18 GENE CHST6 NULL carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 EMBV3_34174 AGCAGTTAGTTTTAGACGGGGAATCAGAGAAACATGCTGGCCCGTTATGCGTCTGAGCAG Gene BVT0102_030126 + 1 EMBV3_22793 GK000009.2:95502673-95719051 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242779 1 XLOC_149442 NonCoding TCONS_00242779 XLOC_149442 NonCoding NonCoding - 9:95523958-95527927 - TSS182457 3969 2 TCONS_00242779_5 123 0.0511463844797178 1 0 0.000826146970230399 0.00135447482570902 0.00100723851416806 0.000353590006423839 0.00156985212893326 0.000250546987362057 0.00096533933653037 0.000706368216360697 0.000359817283272138 2.38431233760255e-05 0.000119390497132146 2.52253083576939e-05 8.8196706700866e-05 0.000884147147151395 0.000170585929214712 1.33089565606819e-05 0 0 0.000527566829180381 0.000732006856767031 0.000177447515138167 0 4.62285335920513e-06 0 0.000541150211722074 0.0015798602079969 0.000966929840007302 2.17804344132957e-05 3.66939495771598e-06 1.51479699982224e-06 XM_005217899.1 BRI3BP PREDICTED: Bos taurus BRI3 binding protein (BRI3BP), transcript 2e-48 199 92.70 0.0337616528092719 0 noncoding 0 0 0 0 -0.0597706310601378 0.592245577108567 -0.0130603383369523 0.819482730512174 GGTTCTTGGCTCTATGTTATTGAAGATGGCATATACTTTTGAAGAGAAGTGAGAAAGCAGAGTAAGGGAACAGAAGGTGTCTGCTGGAGTCCCCAGGGGTGAATGGGGTCTCCAGAACCGTGGGGGCCACAGAGGATCTGACGGTTCTTGGGTCCTGGGAACTCTTGTAAGTGGTCCAGAAAGTTGGATGCCCTTGGTGGTGCTGGCTAAGTCAGCGCTATAATGATCCCTGGTCATTGTGTTGTGAGGCTGCGGTCATGGCCCTCCATGAGCCCCTCCCTGCACCCGCATCTGACCTTGGACTGGACAGATTACCAGCCTCTGACTTACGTTTTACTGATATTTCTAAACTGCCTACCTACCACCTGTGCTACTAATTTCCTAATGCTCTTAGTATTTTCCTATAAATGGACTCACTGGAAAGGACTTAAGTTTGTCCAAGAATCACTTAAACCATCTGCTTTATGAGTCACACTTTGGGAAACACTGGCTTACTCAGCCTCAACCTGAAATACACCACCTTTGCTGAAACTCCTTTGTCTCTAAGCAATATCTCTGATGTAGGATTCTTTTGTGTGTGTGTATGTTGCATATGCTCTCATATGCTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCCATCTCTGCGACCCCATAAATGGCAGCCCACCAAGCTCCTCCATCCATGGGATTCTCCAGGCAAGAGTACTGGAGTCGCTTGCCATTTCCTTCTCCAATGATCTCCTATGGAACTTGCCTAACACAATTATGGATTTTATTTTTTTTAAGATTCAGGGTCTTATGCTCATTTTAAAATACAGTACCCCCATGCTCTAAACGCTATAATTTCAGTCTTTGCTTTTCATAGAGCTTATGATTTCTTAATTTTATGTACTGTCAAGGAAATAGATTTTATAACCTAAGTTAGAAAGATGTTTAACAAATCTCGTGAAAAATTGCTAAAACATAGGAAGTGTTCTTTTGAATACAGAAATTGCAGTTGATCCTTAGAGGAGGGTAAGAAACTCAGTATCCTTGTTCTTGCCCCTGCCCTGTTACCTGTTATAATTAGCTTTTTTATGGGATAGAAATCTTCCGTTCTTTGGAGTTTCTCTTATAAGCTGGCTTTATTTAGGATAACAGCAGATGTTGTTGATCTTGGTTATCTCCAGCTTCTGAGGGGCATTTTCTTGAGGCAAGAATTCCAAAGGGATCTGTGCTTCTCATCTGTGTTCTTGAGATTCAGACAGACACTGTCTGAGTGTTGATCCTTTATTTCTAAGCTTTATGAAATCAGAATCACAGTGTATCCATACATAGAAACCCTGACGATTCTGGATTTACTATTCTCAGATCCCTCAGAATAAAGCTGTAAATTCTTACTACCTGTTAACTTTATTTTCTCTTGACACTCTGTGGTGACTCTTGAACCATTGAAGGGCTTTGATTCTAAGGCACATTTTTACACAAAATTGAGAGTTTGATGTTTTATTATTTTGTTCTGTACTGAAAGGGATATTCTAACAATTGGCCCCCTGAGCTTAGATTTTGGATCGACTAACTATCCTTGGTTTCAGCTTCATTCTTTCAGTAGGTATTTATCGAGCACCTACTGTGTCCCAGACATAGTGTTAGATTGTAGAGGTGCAGCGTCTTTCCTTCAAAGACCAGATGGGAGACTGGCCAGCCCACCTGAACTTCTACTAGATTTCATTCAAAGGCCTCTGTGTTTTTTCGTTTGTTTGCTTTATTTTGGTTTCGAACAGTTGTTGATCCACATATTTGCCATTTACTTCTGGTGGCCAATGTGTTCTTTTCAATTCTGGCTCAGGAAATAACCTTCCTTATTAGTTGACGGTTGTTGTTCCAAACTTTATGCTTATCTCAAGGGTTTTAAGTATGGGATGTATAACTTAGGTTGAGAGTTGTGAACAGTAGGAAAAATGTCATTTGCTTTGCAAAGTCCTCAAGGCCACAGATTCCTTGTTGCTAGCTGTATCTGGCTTTCATTTCCAAGATTCCCTCCTAGTGCAAGATAGTTACTTCACCTCCAGTCAATACGTCTGCATTTTAGCCACCCAAAAGGTGAAGAGTCAAAGAAATAAGGTTAAAATGTATGCATAAGCCATATTCCCTGCCACATTCTCAATCTTTGCTACTTGTGAATGTACTTTTCTTCTAATATCAAAGTCATCTCTCTAAATCCTGTAACAGGTCACACTCTTTAACACCAGAAGATCCTTGGATATGAGATATGTTTATCCAAAGAAGAAAGAAAAATGCAACATAATATTATTAATTTTTAAATGTTTCTAATGTATCTTTAAACAGGAGCTAACAAAACTGAAAGTAAATACTAGAAATGACTGCTCCCATTTTTCTTCCAGCATATTAAAATGTCTCCAAAAGTTTTGATAGTTTTCTCCATATTATTCAAAGAGTTATTTGATGGCAACTGCAGGCCAAGCTTGTGTTTTCTTTTGCTAATGCTGTATTTGATACTGACATCAGGTTTAAATGCTCTCTAAACCACAGCATAAGCACAGTATTGATTTCAGTCGGATCAGAAAGCATCCTTTCGTGAGTGTCTTTGACAGCCCTGGAAACAAGGCCGTCGGGCTGAAAACAACCCTCAGTTTCGGTGTCACCCATCTCAACAGTCTCATTTATCGCAAATTGAAGAGCTTTGCCCAGGCCGTCTTTCTTACTACACCTCTGTTGCCTAATGTTTCCTGGGAGACGATGCCAGGCCACTCTGAAAGGCAGCGGAAAGCTTTTAGAAGCGAAGTGAGCTGGGTATTCACCACAGTACCACTTTCTTCCGAAGTTCTCGAAGGCTTTCACAGTCTGAGCTGGCAGGTTGCAGGAGGGCTGCAGGAGTTCTGATGCCCCTTGATGCAGACGCTGTGGATCTATTTGAAGATGCACCATCTACGCGGGCAGCGGAGGCGTGCCGGAGACATTGTAGACAGGGCAGGGTGACCCGTGCCTATGTCTAAGGGGAGGATCACTCAGGAACAAAAAGGAACGAAGGCAAGGAAGCAGGCATCTGGGCCTTGGGGGGTTGTGGGGGCAAGAGAGGTTCATGTTGAGCTGTCGTCCCTTTTTATCACCGCCCTGCACCCCTAAATGAAGCAGAAGAATCACATGGAATCCCTACGAAGCTTCTTGTAGAGACTGGTTTTCCTCAAAGGCTGCTTCTCAATCCAGAGGCCCCCGTGATTCTGGCTTTTGTTTGTTTTGGGTTTGTTTTTTCAGCAGGTAGGATGGTGGCGTCCTGGGCAGGGGACCCTGCCCCTGGCTGCCCCGCTGGCCGGCTGTGCTCATCTTCAGGACTTGGGCCACCACGTACCGACCATTGTGATTTTCTTCGTGAGGAACAGAATGTAATCTTTCTTATAGTCAGCTGGGGATACAAGCGGCTCTTGTTAGAAGGAAAATGACTGTGGAACACAGCCTTTTCGCTCAGATAAAGCAGTTAGTTTTAGACGGGGAATCAGAGAAACATGCTGGCCCGTTATGCGTCTGAGCAGAGCTCTCCCCGGCGCTTAGCTCAGTGTCAGATGACATTCTTTGATAGCTACTGGGTACCAGTCCCCATCCCCTTAATCTGACTCTGCGAGGAGGGTGGGTGAGGGCTGAGAAGAGAATTAACTGCAGGCCTGAGAGAAGAAACAGAGGAAATGGGAGTTTTGCTGTCTTGGCGATGCCTGGGTTTCACGAGGGCTCATTGATGTTTGCAGATTGCTGCCGCTGTTGTGAAATCACATTCTCTTCTGCTTCAGGAGGGGGCCTGCTGCTGCTGGCGGGCAGCTTTTCCTGCTTTCTGCGTCCCGAGGAAGCCTCGCAGGCCTGTAGCCCTAGATTCTGAATGGAGGTGCCAGGTTAGGGCTTGAGCAAAGACCGGTCCAGTCATGTGCTGATGCTGGTAGACTTTTGAGTTTGCAATCTATCTCAAGGGCCTAAAAGT TCONS_00238109 . 5' 128064 TCONS_00238109 . 5' 128064 EMBV3_35588 CAAGGCCTTCTACAAAAAATTATTTGAGAAGTTTCACCAGAGAGGGTTATAATTCTTGCC Gene GeneID:781016|CWC22:XM_002685271:92_cdna Constitutive 2 NULL GeneID:781016 2 GENE CWC22 NULL CWC22 spliceosome-associated protein homolog (S. cerevisiae) EMBV3_21315 CTGGCCATGAGCAAGGAGGAGGCCGACCAGGAGGAGCGGATCCGCCGTGGGGACGACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07682 TTACCTTTACTTTGGTGGCTTGCTTCCCTGATGCCCTGGAATACAACTCAGAGCTCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42319 GAAAAACCTCAACCTGGACTTAAATGACATGGAAAACTGGACCATGGGGCTCTGGCAAGC Gene GeneID:536739|CLDN24:XM_002698671:155_cdna Constitutive 0 NULL GeneID:536739 27 GENE CLDN24 NULL claudin 24 EMBV3_34876 TAGCACCAGACCCTGTGTTTTCTGGGAACGGTAAGCAGATGCTGGGTGCCAGTCCAGATT Gene BVV0102_031436 + 0 NULL GK000013.2:54531002-54545158 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12148 TTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAA Gene BVV0101_061722 - 1 EMBV3_05048 GK000008.2:6473917-6642814 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00166913 TCONS_00036105 TCONS_00238581 TCONS_00253739 TCONS_00129710 TCONS_00118490 TCONS_00011700 TCONS_00059696 TCONS_00250599 TCONS_00012285 TCONS_00040981 TCONS_00125637 TCONS_00165977 TCONS_00219592 TCONS_00118456 TCONS_00040258 TCONS_00111186 TCONS_00145751 TCONS_00250203 TCONS_00233473 TCONS_00031886 TCONS_00133817 TCONS_00246739 TCONS_00234240 TCONS_00087729 TCONS_00196823 TCONS_00174808 TCONS_00211020 TCONS_00118491 TCONS_00115210 TCONS_00251851 TCONS_00174807 TCONS_00132067 TCONS_00250681 TCONS_00251720 TCONS_00145750 TCONS_00072261 TCONS_00055707 TCONS_00174805 TCONS_00023655 TCONS_00171428 TCONS_00204211 TCONS_00207933 TCONS_00174806 TCONS_00031972 TCONS_00059695 TCONS_00188145 TCONS_00238985 TCONS_00161822 TCONS_00118487 TCONS_00232824 TCONS_00188520 TCONS_00089291 TCONS_00002600 TCONS_00036106 TCONS_00229794 TCONS_00199364 TCONS_00207485 TCONS_00099018 TCONS_00031759 TCONS_00209974 TCONS_00198820 TCONS_00206299 TCONS_00000529 TCONS_00246741 TCONS_00170891 TCONS_00251625 TCONS_00246740 TCONS_00061493 TCONS_00118459 TCONS_00220566 TCONS_00118040 TCONS_00056144 TCONS_00210913 TCONS_00204210 TCONS_00019195 TCONS_00010963 TCONS_00124524 TCONS_00252081 TCONS_00166910 TCONS_00216950 TCONS_00241019 TCONS_00123823 TCONS_00110425 TCONS_00001867 TCONS_00174809 TCONS_00242064 TCONS_00125353 TCONS_00162767 TCONS_00018601 TCONS_00132066 TCONS_00080713 TCONS_00022895 TCONS_00118488 TCONS_00107436 TCONS_00198905 TCONS_00078426 TCONS_00087730 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00206300 TCONS_00205125 TCONS_00010280 TCONS_00004603 TCONS_00061496 TCONS_00061492 TCONS_00228562 TCONS_00221350 TCONS_00056149 TCONS_00125692 TCONS_00118489 TCONS_00168038 TCONS_00175330 TCONS_00173458 TCONS_00061495 TCONS_00001866 TCONS_00006385 TCONS_00218901 TCONS_00009619 TCONS_00007850 TCONS_00001865 98 XLOC_105290 XLOC_072622 XLOC_101749 XLOC_021081 XLOC_145248 XLOC_156678 XLOC_078423 XLOC_072644 XLOC_007251 XLOC_036486 XLOC_153542 XLOC_007831 XLOC_024793 XLOC_077179 XLOC_100817 XLOC_132911 XLOC_024074 XLOC_067086 XLOC_088920 XLOC_153146 XLOC_142955 XLOC_018131 XLOC_081223 XLOC_151107 XLOC_143719 XLOC_052579 XLOC_118488 XLOC_104695 XLOC_129530 XLOC_069472 XLOC_154792 XLOC_080699 XLOC_153624 XLOC_154661 XLOC_044030 XLOC_033515 XLOC_014322 XLOC_103815 XLOC_124371 XLOC_126448 XLOC_018217 XLOC_114188 XLOC_145651 XLOC_098707 XLOC_142307 XLOC_114563 XLOC_054076 XLOC_000643 XLOC_139288 XLOC_121017 XLOC_126001 XLOC_059261 XLOC_018004 XLOC_128485 XLOC_120473 XLOC_124877 XLOC_000141 XLOC_103679 XLOC_154566 XLOC_036985 XLOC_133883 XLOC_072206 XLOC_033947 XLOC_129423 XLOC_009875 XLOC_006514 XLOC_076070 XLOC_155022 XLOC_101746 XLOC_131385 XLOC_147683 XLOC_075375 XLOC_066329 XLOC_000454 XLOC_148728 XLOC_076895 XLOC_099648 XLOC_009288 XLOC_049597 XLOC_013565 XLOC_063346 XLOC_120558 XLOC_047314 XLOC_148229 XLOC_124587 XLOC_005831 XLOC_001070 XLOC_138526 XLOC_134666 XLOC_033952 XLOC_077234 XLOC_102874 XLOC_105112 XLOC_104361 XLOC_001948 XLOC_132220 XLOC_005172 XLOC_003410 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_19432 CAAGAGGATGACCAGAGTGACATTTTCTCCATCAAGGAAGTGAGTTTTCAGGCCACCGGC Gene GeneID:518321|C1QBP:NM_001034527:111_cdna Constitutive 0 NULL GeneID:518321 19 GENE C1QBP MGC127588 complement component 1, q subcomponent binding protein EMBV3_12009 AGCCTTCCTGACCATTGTCTGCCTAGAGGAAATGGATGACATGGAGCAAAACCTGAAGCC Gene GeneID:615930|IFI30:NM_001101251:119_cdna Constitutive 1 NULL GeneID:615930 7 GENE IFI30 NULL gamma-inducible protein 30 EMBV3_43750 AGTGCTCTTCTGGCTTTCAGAGGAATTTCTTTGTGAGTACAGAAGTCCTCCAAGCCCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01982 CACTTGTGACGACGTGAAGGAGCAGATCTACAAACTGGCCAAGAAAGGCCTGACTCCCTC Gene GeneID:784160|LOC784160:XM_002692121:31_cdna Constitutive 0 NULL GeneID:784160 13 GENE LOC784160 NULL similar to ribosomal protein S13 EMBV3_30836 AGCTCACACTTACTGCTGTTCGAAGGAGAGCCTGTAAACCTTCAAGTGGGAATGGTCTCC Gene GeneID:777596|HORMAD2:NM_001078143:107_cdna Constitutive 0 NULL GeneID:777596 17 GENE HORMAD2 MGC152184 HORMA domain containing 2 EMBV3_10873 TCTTCTGTGAGGAGTGCCGCCTTACTCTGAGCCTCGAGAGCCAGAGCCCCACTGGGAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30122 TGGACCGGGTCACCCAGCCCAGTGGGGAAGTTCTGGCAAAGACAAGAATAAAAGCATCCT Variant GeneID:539040|PCGF1:NM_001046447:48_cdna 453^558 1 EMBV3_30370 GeneID:539040 11 GENE PCGF1 MGC134112 polycomb group ring finger 1 EMBV3_12479 GCTAGAGAGGAGGCACAGAGGGCAGACGACCATAGAGTCCCAGTTCAGACACCGCCTAGA Gene BVT0102_063344 + 0 NULL GK000016.2:31520491-31552369 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069019 1 XLOC_041843 Coding TCONS_00069019 XLOC_041843 Coding Coding CNST 16:31453529-31552428 j TSS51544 5465 1 TCONS_00069019_6 721 0.0356816102470265 11 0.944852272037857 0.000757226508663103 4.63052109076844e-11 7.36225883783349e-05 0.000111137381731276 6.12961530438488e-11 3.95096040132759e-09 9.71307298273746e-15 6.99149697653092e-21 2.7772950550575e-05 1.11710064784343e-12 2.9667398167711e-09 6.91169236986179e-28 7.16694357418657e-19 9.5899764818614e-06 4.50312675482347e-14 2.95370255251829e-08 2.43726743304024e-20 2.16656105782468e-41 7.10051409790856e-05 8.91712928900762e-12 9.08682077003327e-06 1.58701930454767e-11 4.24654206516678e-25 2.80584082705496e-15 8.69165134054124e-05 0.000109020074697635 0.00010990298038385 1.03669408593173e-15 3.81199758910072e-08 5.71884416738344e-15 XM_005216835.1 CNST PREDICTED: Bos taurus consortin, connexin sorting protein (CNST), 0.0 9182 100.00 0.931381518755718 NM_152609.2 CNST Homo sapiens consortin, connexin sorting protein (CNST), transcript 0.0 3254 84.95 0.529368709972553 TCONS_00069019_6 sp|Q6PJW8|CNST_HUMAN CNST_HUMAN Consortin; 0.0 1152 81.93 0.998613037447989 1 coding 0 0 0 0 -0.0674705865745288 0.611815928586245 -0.0181193016541938 0.74719340771493 GGACTAGGCCGGCGGAAGTAAACACTCCACCCTGTGCCTGCGAATGACCTCTCCGTCTTGCCTTTGCCGTCACTTCCGATTCCGTGCCGGCGCAGACGCCGGAGGACTGCGAGTGGACGGCCGGGGAGAGAGAAGGCCCGTCTAGGCGGTGTCTGAACTGGGACTCTATGGTCGTCTGCCCTCTGTGCCTCCTCTCTAGCCGTCCGCGCTCTATGCTCCGCGGTCCCTGGCCGCCGGCCGCCCTCCCGCCTGCCGGGAGGGGTGAGCACAAGGAGGCGGGGCGGGAAGGCGAGAGGTGTCTCCTCCACCCGACCGGCGGGAGACCTGAGCAACCTCTGTGACAGCTCGTCGGCCGCCATGTCAGCGAGCGGGGCTGGAAACAGATTCGGCGCCCGGCGGTAGCCCTCCTTGCGTCTCCTGTTCCTAGACATTGAAGGACTTTAATGAAACTTAAACGGTTCAACAAAAGATGCTCTAATGGATGACAGCGAAACTCCTGCATATAATCTGCAGATAGAACCACAAGATGGATGTCATCCTGGTGACGGCGTGGAAAGTAAAGTAACATGCTTGCCTTCTGCATCAGATGAAAATGAAAATCAGCTTGATGGGGACGGGCTTGAGCTTCTGACCAGCAGTGGCAGTGCGATGGGCAAACCTGAAGTGTTGGAGCAGGACAGTCTGAACAATAATGAAAGCTGCACACCAAGCTGTGAGGTGGCTGCAAGCGAGAACTCGGAAAACATTTCTTGTGAAAGCCCCAAAGACGGGCAGGTCTTCTTGAGAAAGGACCACAAGATACCTGGAAGCAGAAGTCCAAGAAGCAAAAGAGGCACTGTAAAGAAGATACCACAAGGACTTTCTTCAGAAGATAGCACACCTTTAATGCAAGAAAATATACTACATGTAGTGACACATGCCGTTAGTGATGAAGAATCTGCAGAAGTAAATGCTAACGATCAACTGGAAGCCTCAAAGTTGGTTCTGCAATCTCTGTTCTCACTTATACGAGGTGAAGTTGAGCAGTTGGATTCAAGAGCACTTCCCCTTTGCCTTCACCAGATAGCAGAGTCTTATTTCCAGGAGGAGGACTATGAGAAAGCAATGAAATTCATTCAGCTCGAACGACTGTATCACGAGCAATTGCTCGCAAATCTTTCTGCCATTCAAGAACAGTGGGAAACAAAATGGAAAACTGTACAACCACATACAGTTACACCTTTGAGGAATTCAGAGAAAGGATTTAATGGTGAAGATTTTGAACGGCTTGCTAAATTTTGTGCAACACATCAAGATCCTCTTTTATCCAAAGATAAGATAGCAGCTGTCCAGAAGTCCCTGGGAAGGAAATGCTTTACGCAGTTAATAGTGTCTGAAGATCCAAAGGAAAGAGGAGCTACAGCCAAAGAGCTGGAGAGTGAAATTTGTCTTGGCATGGAATCAGGAAAAGAAAGCCAACATAAAGAAGAGACCCTGGAGAGCAGTCCCTGCTGTAATGAGATGGTCAGGCAGGCAGATCCCCGGAGCCTCCCGGTAACTGCAAGGAAGGGCCACACGGAGGAGCCACTCTGCAGCTCTGAAGCCACGCAGGAGCTCCACGCCCAGCCCTCGGAGTCGGCAGGGAGCAGGTCCAGCCCCCACTCCTCAGGGAATGCTCCTGAGGATGACAGCCGCTTGCAGCTGGCTCAGACAGAGGCCTGCCAAGACGTGGCCGAAACAGAGCGCATTGCTAAGAACCCTAAGGTTTCCAGCCAGTCAGTGACAGAGCCATTGATTTTACCAGGCTCTGACCATATACCTCCTGCATTGATTTCTGAGGGTAAATACTCACAAAGAAAGGAACTCCGGTTGCCACTCCGGGATGCTTCTGAGGCGTTGCCCACAGACCAACTTGAGAACAATGAATTAAATGAGCTGCAGCAACCTGATCTCACAGAGCGTGATGGAAAATCACCACAGGGGCAGGCTGACTCAGAGGGTTCTGAGAGTGTACTTTGTGAAAATAATCCAGTGTCTGATTTAAGTACAGTGCTTCCAGAGGTGTATATGGCCCCAGAGGAACAGGGAGATAAGGAAGAACAAGTCAGTAAAGAGACAGACGACTATTTGAACAGCCTTTTAGGAGGATGCTTAAAAGATACTGAAGATTCCCTCTCATACGAAGATAACCAAGAGGAAGACTCTGATTTCCTTCAAGATCTTTCTCCTGAAGAAGCATCCTATAGCCTACAGGAGAACCTGCCTTCTGATGAAAGCTGTCTCTCTCTCGATGATCTTGCAAAAAGGATAGAGATCGCAGAGGTTGTTCCTGCTGAAGGACTGGTCTCTATATTGAAGAAGAGGAATGATAGTGTAGGAGATCGTCCTGCCCAGATGCAGCAGAAACCATCCAAGCGAAGAGTGAGGTTCCAAGAAATAGACGACAGCCTAGATCAAGATGAAGTTGGAGGTGGCTCCTGTATTTTACTGGTCTTGCTGTGCATAGTGACGGTTTTGCTTAGTGTGGGAGGAACTGCGTTATACTGCACTTTTGGTGACATGGGGTCACCCGTTTGTACAGACTTCGCAGACAACGTGGACTTCTATTACACTAAGTTACTACAGGGAATAGCAGAACTTAAACACTGGATCTACCTCTCCTAGCAAGCATTCAAGAGGGACAGGCATGCTGGCAGTGAGAATCAAAGAGTGAACCTTTCTCAGCAGCTTTTATTTCAGGAGTTCCGTAACATGCGCCCTCACCTCCCCCACCCCGCTCCCCAGAGGAACAACAAACATCAGAAACAGCAACTGTAAATGGCAATCCAGAGGAACTCTCAGAATAATCACACCATGAAGCGATATTGATCTGAGCACTGTGGGTGGATGGCATGGTCTTTGGACAGCGTGTCCACCTCCTCCTCACTGCCTCCCAGTGTAGTGAGCTGCACTGAGCAGAATTAGACAGGGCAGTGTTGGAGCCAAACCACTTTTGGCTACCTTCAAGCTAATGGTTGACTTCCCTGGTGGCTCAGATGGTAAAGCGTCTGCCTACAATGCAGGAGACCCGGGTTGAATCCCTGGGTCGGGAAGATCTCCTGGAGAAGGAAATAGCAACCCACTCCAGTACCCTTGCCTGGAAAATCCGATGGACGGAGAAGCCCGGTAGGCTACAGTCGCAAAGAGTCGGACGCGACTGAGCGACTTCACTTCACTTCACTAAGCTAATGGTTAAAGGACACTCTTGATTTACGATTGTTGGTCCAAAGACATTGCTTCCAGCCATCCCGCAATAAGTTTGTGTGTAATGAAAAGGAGTTTCCTTATGGTTTCAGTGTCTTTTTTAGTTCACTTTGGGAGCTATATAATTTAGGCTTTGTGCACTCTTTCCAGATTCTGTTTTCCACTTGCAAAATGGTTTTGTGTGTGTGTGTGTGTGTGTGTTTCAGACAGTTACCATAAGCAAAAACCCAACATAGAATAACAAAGATTATCCTTTCAACATGACTATAAATGTGCAGGCACAAAACTTTCAAGAAGGCATAACTGTGGAACAGATGAATTATAGAAGTCTTGGCCCTGAATTGAGAAACTGTGACAGATACAGTGACAGTTAACTTGGTTAACTAGCCAGAAGTTCATCACAGGCCTAGAGATAAAACTGAATAGCTTCCCCTGAGTCTCAGGCAACCAGTTTCATCATGGATTCAGTGCTTCCTGTAATGAATGCCGGATTCAGCTCAATTCAGTAAGACCTACTGAGCACCTATTATGTTCTGAGAATCTAAGACCCCTTCTACAAAGGTAAATAAGATACTAGTTCCTGCTCTAGATGTTTTGATTCTGGTCTTAGGTAAAATAAACTAATACTTTAATGAATGAAATTAAATCATCATATATAATTCAGTATTAACAGATCAGACACTCAGATGCTTGAATATGCATTCATATCATGGGCTTAATTCAGACCTAATATGGGGTCATTAGATGAAAATCCAATCATATCTTAAATAGACAAATGTCTGATTTTTATTTAAATCTGTCAGTTTTCCTTTTCTAAAGTACAGTGATCTAACAATTAGGAAGCCTTTCTTTAACCTTTTAATCTCATTGATAGCATTCTAAAAGAAACAAAACACATGAATTATAGTTTTTTAGCAATGATCATTATTTCATGTTTTTCAGTTAGAATCATTTGAAAGAAAAAGAGAATTTTCTTACTAGTTGTTACTGGCTGGTACAGTACATCCCTTCGTGTTTCAGCTTATTTATTTAGACTTATGATTTTTAAAAGGGCTTTTTATAGAAGTTGAAATTGTGTCATTTAGCACGCATTTGGTTATACCTGATATTTAATTACTGTATACTTAGTGTTGATTTTCTATAATTTCAACTCAGTGTGTTTTTAGGCTTATTTTTAAATTGATGTTTTATTTTTACTTACAATACTGTTTGACTTGTCTCTATCATGCCACCATAAACTATAATATTTTCAAGGATTATAGATCAAAGATATTTATTTAGAAGTGTACAAGATACTGAAATCTAGATTCCTTATACTTAAGGCTGATTTTATTAGAAGATTATTTTAATGTTCTATTATAAATTTTAAGAATTTGTATTCAACTTGTATGTAAATATATAAAATGTTGATGGTACTATCTTATGTGGTTCTGTAAGAGACATTCACAGAGTCTACTGTGTGGGTATCCCCAACATAGACGAACCTCTTCTGTTTTACCCTCATGATTTCTAGCTACAGAAATTTGGCAATGCTGATTTCTGCCGGTTTTATGTCAAGATAAGTCAAAATTTCCTTCCTGTTCCTTTTTTCGATCACTATTGAAGTTCTAAATACTCTGTAGTATTACATTGGCCACCAGGGCCATTGCTTCTGAAACTGAAGATTTCCCAGGTGCCTTCACACTGAGGGGAAAGATCTGAGACGACGCCTTGGTCCCTGGAGGCAGCTGCATCTCAGGAAAGCCAGGCTTGTCCTCACTGCGTCCCGTGGAGAGGGAGCTGAGCTCAAGAGCATACTGATGTCTTGATTTAAAATAGGCATGAAATCTCACCTAGAAAAACTAGGGCAGCTTTTTAAAATGTAATGGTCATTTATTGCATGAATTGGAGTAATTCCATCTGGTGATGAGAGAATTGTTATCTCTCACATAAAGAATTCATCCAGTTTGACTATCATGTAATTTTTTCCTGTCATTGGAAAGTACTGACAACGATTTGTAACTAATCTTCCTTAAAAACTGTATTTGGGGGTAACAGATCAAGCTTGTAATTTAAAATCTACACCAACAAAATGTCTCAGAGAGTTTATTTGAACCTCTTGGGTACTGAGAAAAACCGCTTTATTTAAAGTGAAAGTAAAGTAATTTCAGAAGTTGGTCTGGCCCCACAAGTAGGTTACTTTGGGTAGTCTAATAGGTTCCTACATAATGCTCCTGTGCTTCTAAAACATCTCCGCATCTGCC EMBV3_11415 ACAGCCTCAGCTCTCTCACCTTCTCTGAACATGACCTACCACCCGACGTGCTGGACTCTT Gene GeneID:617096|CDH26:XM_002692262:1576_cdna Constitutive 0 NULL GeneID:617096 13 GENE CDH26 NULL cadherin 26 EMBV3_02507 GAGATGAGCAGCAATGACTCCTCCCTTATGAGCACATCCAGGATGCCATCAGCAGCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35696 CTCAGAGGTAGAAGAAGCTCAAGAAGCAAGCATGGAAACTGACCCTAAACCATAGACCAG Gene GeneID:510250|THOC7:NM_001040514:2_cdna Constitutive 0 NULL GeneID:510250 22 GENE THOC7 MGC128087 THO complex 7 homolog (Drosophila) EMBV3_02271 CGGGGGAGGCGGTGATCGGCTTCGAAAGGTGAAGTCTGAGAAGGCATGTATTCTTTTTAT Gene BVV0102_164330 + 0 NULL GK000022.2:57609086-57789250 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24393 CTCAAGCTGTTCCTGTCCTTCAGCGGCCCCGGCAAACAGGAGGAGAACGACGTGGTGGAG Variant GeneID:614344|SNX8:NM_001046533:290_cdna 526^900 1 EMBV3_20137 GeneID:614344 25 GENE SNX8 MGC137391 sorting nexin 8 EMBV3_27345 GCAGGGCAGAAACCATTTGAATGCTCAGTTTGTGGCAAAACATTCAGACAGGCTCCTCAC Gene GeneID:786537|LOC786537:XR_083772:118_cdna Constitutive 0 NULL GeneID:786537 10 PSEUDO LOC786537 NULL similar to zinc finger protein 770 EMBV3_30748 CATTAATCCCAGGAACCACTAGCAGTAGCGGGCCGCCGCCAATCTAACATGAGCACAGGT Gene GeneID:514920|KBTBD2:NM_001102013:51_cdna UTR3_Alt 1 NULL GeneID:514920 4 GENE KBTBD2 MGC166266 kelch repeat and BTB (POZ) domain containing 2 EMBV3_10573 CTGTGTGTGCAATAGAGCCTTTCGGGTTCTGGTCATCTGTCTCCTATGTGCAATACCCTG Gene GeneID:537305|EML5:XM_002691108:23_cdna UTR3_Alt 2 NULL GeneID:537305 10 GENE EML5 NULL echinoderm microtubule associated protein like 5 EMBV3_05551 TTCCCGAATTCTCTTCTGGGATGCAAAAGCCCTTGAGGAAACACACCTCCTCTGTCGAGG Gene GeneID:100296018|LOC100296018:XM_002697801:410_cdna Constitutive 0 NULL GeneID:100296018 24 GENE LOC100296018 NULL hypothetical protein LOC100296018 EMBV3_12241 CAGGCTGCTTGGGGAGACACCAGAACCCAGCTGGAGTGGGCCATGAAGCTCTGGTGGCCA Variant GeneID:516214|RENBP:NM_001046223:61_cdna 651^826 2 EMBV3_42088 GeneID:516214 X GENE RENBP MGC137226 renin binding protein EMBV3_15359 GAAGAGGGTACGAGTTGTAGAAGAGAGGGAAAGATGCAGAGGATGGTTGGAAAAGTGGTG Gene BVV0102_250330 + 0 NULL GK000008.2:30156053-30983366 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15530 TTGATCTTGTTGATTATGAAGAAGTGTTAGGAAAACTTGGAATCTATGATGCTGATGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12841 AAGAGCCCAGAAAAACCTCTGAGCACTGAAGGGCCTGAGAAAGCATTATTTTGGGGGACC Gene BVT0102_215703 + 0 NULL GK000006.2:119419275-119453974 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206390 1 XLOC_124913 Coding TCONS_00206390 XLOC_124913 Coding Coding ACOX3 6:119452206-119457259 = TSS153898 2534 1 TCONS_00206390_8 154 0.0753749013417522 2 0.498812351543943 7.42811656446468e-05 5.46360739156771e-06 5.05605895183704e-06 8.84784361405802e-12 3.80255903611101e-12 4.80468384881272e-12 0 5.83536046231432e-07 0 1.78607394129358e-05 1.23962281910826e-06 2.78927064047943e-12 0 0 5.68332893928303e-12 0.000481410417977511 1.53813959835565e-11 0.000614871706543006 1.94597094257982e-06 4.99441921985018e-12 7.18799539023984e-06 0.000152614118031156 0.000463408782697712 0.000575580838538488 2.64207382191604e-05 5.56075244070303e-06 7.63981054785018e-12 1.04037350039288e-05 2.63899596388767e-05 4.77043421883676e-12 NM_001103236.1 ACOX3 Bos taurus acyl-CoA oxidase 3, pristanoyl (ACOX3), mRNA. 0.0 1382 100.00 0.301894238358327 NM_001243723.1 SETMAR Homo sapiens SET domain and mariner transposase fusion gene (SETMAR), transcript variant 2, mRNA. 0.0 731 81.87 0.291633780584057 TCONS_00206390_8 sp|Q53H47|SETMR_HUMAN SETMR_HUMAN Histone-lysine N-methyltransferase SETMAR; 3e-19 85.9 35.29 0.909090909090909 1 noncoding 0 0 0 0 -0.0414294112728536 0.780722144115433 0.00507101407278809 0.923640864375504 ACAGCTGAAAGATGATGCTGTTGCCCTGGTGGATGTCATCGCCCCTCCGGACTTCATCCTGGACTCACCGATTGGCAGAGCAGATGGCGAGCTCTATAAAAATCTCTGGACTGCCGTCCTTCAGGAAAATAAGGTGCTGGAGCGGGCATCTTGGTGGGCGGAATTTGCGGTCAACAAGCCCGTCATAGGAAGTTTGAAACCAAAGCTGTAATAGCACCGGCTAAATCTGGCGAAGCCATGAACACCTGGACCTCAAGTTCACTTCTGGAAGCCCCAGGCCCGCAGTTCTACCTGGCTGCTTGTCCTGTTGAGTCCAGGGCTGGAGCAGCTTATCCTGGCCTGGCCCCGCCCCCCGCCCCAAGTCCCACCAGGACGGGTCACGTCCAAAGGGCAGGACTGCTTTGGGTCATCCCTATTTGCTGGGTGAAAAGAAAGTTTATACATAGAATCATGTCTTCCTGAGAGACTGAACACTTTTGGATAATTAGAGCTTTAGCATACTTCTATTTTCATATGCTGATTATGAAGCTGACTACTTGTAATTTGGGATTTTTCTGGCCGGGTGATCTTTTGCCTTCATCTGAGATTTCTTCCAAGGCTTTGCGTCACTAACCCCTGAACGATGCCAGTCCGATTCTTTGTTCGCCCAAGTTTGACTTTCTCACGTCATCAAATCATATCGTAACTTTACTAATTTGCACCGTGGACCACCCGAATGGCATAGTTAAAGATTTTGAAGGAAAATAAAATCAGTTTTATTACTTTCTCTTGTGGAACTAGAAGTTTCCATCAAAGAAGTGTTTCCAAAGGATAAAAAATGCATAATGATTTGAAGATCTGGTCATCCTTACATCCTGACCTCCCTGTTGTATGCACATTACGTTGTCACTTTGTTACTTGAAAGAGTTTCTTTCTACAGGCAGTGGAGCTCCCAGGCTGCCTGGCCCGTGGGGGGTTTGCCCCACGCTTCTGCACGCTGTCCACCCTCAGGCCCAAGCGCCCTGCGGACAGCGGGGGCTGATGGAGGAGGCTGATGGCCATCTCCACCCATGATTCCTTTGCCCCAGGTCAGGACGATGGCCGGTGGGTGGGTTCTGACTCTCCGCCCTGTCTCGTCCTCCGCTCCCCTTCAGCTTCCGATCTCTCCAGGAGGTTCAGGACCTCTGACATCAGCAGCCCCGTGCCCTCCCCACCCTGCCGTGGTGCCCACGGAGCACACTGGTACTGAACAAAGGTGGCTCTTATTTTCCAAAAGAGCCCAGAAAAACCTCTGAGCACTGAAGGGCCTGAGAAAGCATTATTTTGGGGGACCTTCCGTGGTGGTCCAGTGGTTAAGACTTCACCTTCCAATGCTGGGCAGCGGGTACAAGTTCAGCCCCTGGTCAGGGAGATAAGATCCCACATGCCTCGCAGCCAAAACACCACAACATAAAACGAAGGTCATATTGTATTGAGGTTGGTGCAGAAGCAACTGGTTTTGCATTGTTGAGCTCAGCTGTTTGATACTGGAATACATTCTTAAATAAAATGGTTATGTTGTGGTGGTGTTCAGTCGCTAAGTCACGTCTGACTCACTGGAGCGGATCCTGTTGCAACTACGCGGGACATTCTCGGAGACCTCAGTGTCAGTGAGTCGATGTCAGTGTCAACTCAGCGCCGTTCTACGGTCACGTGGCACTGGAAGCAAATTGGAAAGGTGAGAAAGCTCAGTAAGTGGGTGCCTCGTGAGCTGACCGCAAATCAAAAAAACAGGTTTTGAGGTGTTGTCTTCTCTTTTCTACGCAACGACAATGAACCATTTCTCTACTGGGTTGTGATATGTGATGAAAAGTGGATTTTATACAACCGGTGACAACCAGCTTAAGTGGTTGGACCAAGAAGAAACTCCAAAGCACTTCCCTAAACCAAACTCACAACTAAAAAAGGTCGTGGTCACTGTGTGGTGGTCTGCTACCGGCCTGACCCACTACAGCTTTCTGAATCCTGGTGAAAAACATCTGAGACGTACGCTCGGCAAATCTGTGAAAACTGCAGCGCCTGCAGCCGGCGTTGGTCAACAGAAAGGGCCCAGGTCCTCCCCACGACGACGCCTGACCGCACATCGCACAGCCAAGGCTTCGGAAGCTGAACAAGTTGGGCTACGAAGTCTTGCCTCACCTGCCATATTCACCTGGCCTCTCGCCAGCCCACTTCCACTTCTTCAAGCACCTCGACAACTTTTTGCAGGGAAAACACTTCCACAACCAGCCGGAGGCAGGAATGCTTTCCAAGAGTTCATCCAATCCTGAAGCACGGATTTTTATGCTACAGGAATTAAAAACCTTATTTCTCATTGGCAAAAATATGTTGATTGTAATGGTTCCCATTAATGATTAATTAAGATGTGTTTGAACCTAGTTAGGACTTAAAATTCATGGTTCAAAATTGCGGCTACTTTTTCACCAAACTCCTTAACAAATGTAATAAAGACTTTAAAAATAGTCCACATCAAAAAAAAACCCCCAAAAAACCTTAAAAAAAAAAAAAAAAAAAGA EMBV3_03021 TTCTAAGTTTGGTGTCTTATTATTGATCATCATACGTGAAAGTAAATTTTAACCCTGGAA Gene GeneID:504835|MRPL1:NM_001101844:38_cdna Constitutive 0 NULL GeneID:504835 6 GENE MRPL1 L1mt MGC157345 MRP-L1 mitochondrial ribosomal protein L1 EMBV3_06629 ATCTGGGCCGCATGCTGCGTTGTCTCAAAGGGGATTCCCGTCGAAACATCATCATGTGGC Variant GeneID:534011|FGGY:XM_002686392:236_cdna 312^423 1 EMBV3_15303 GeneID:534011 3 GENE FGGY NULL FGGY carbohydrate kinase domain containing EMBV3_16469 AGGAGTACCTGGTCGTCATCATCTCCACTGACCCGTGCTTCGGGGCTTTGCTAGAGTACA Gene GeneID:100139822|MOV10L1:XM_002687999:132_cdna Constitutive 0 NULL GeneID:100139822 5 GENE MOV10L1 NULL Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) EMBV3_16974 ATGTCCCTCATTGCTGCTGGCTTCACAAGGAGAAAAGTCAAGAAGCAATTGAAATTACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33009 GTGGGGAAGGTGCCTAGAGTGCACTGTTTGAATGAAGGAATGACCGTAGGGATGAATGAA Gene BVT0102_328399 + 0 NULL GK000012.2:72389020-72507908 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41682 GAAAACCAAACAAATGGTAAGCATCTAGGGACGAGGTAAGGAGGGTCACCGAGACTCCAG Gene GeneID:784716|CDH23:XM_002698870:472_cdna Constitutive 0 NULL GeneID:784716 28 GENE CDH23 NULL cadherin-related 23 EMBV3_15064 CAACAGGTTTATCTGAAGGACCCCAGGCAAGATGTTAATCTCCCAGCCCACCTCAACCCA Gene GeneID:338078|STC1:NM_176669:2_cdna Constitutive 0 NULL GeneID:338078 8 GENE STC1 MGC128640 stanniocalcin 1 EMBV3_30276 ATGTCAAAGCCAAAATCCAAGACAAGGAGGAGTCCACCCTGCACTTGGTGCTTCGTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35691 AAGCCTTGGGGGCCAGATAGAAGTGCTGCTTCTCTGAGTTTCAGTTTCCCCGTCTGTGAA Gene GeneID:783642|RILP:XM_002695683:219_cdna Constitutive 0 NULL GeneID:783642 19 GENE RILP NULL Rab interacting lysosomal protein EMBV3_12379 CTCCCAGTGGCACACAGAGTTCTCGGGAATATGACGGAAACATTCGACAAGCAACGGTTA Gene GeneID:534211|BIRC6:XM_002691220:50_cdna UTR3_Alt 2 NULL GeneID:534211 11 GENE BIRC6 NULL baculoviral IAP repeat-containing 6 EMBV3_08195 AGTTGTGTTATAGCCTGGATCTCATGCCCTACCTCCTTGTGAAGAAGGCCTTAGAGTGGG Gene BVV0102_302240 + 0 NULL GK000003.2:34426699-34438480 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25114 ACCATCCCCAAAGTGCCCTGGTGCTTCTTCCCCATCTCCGTGGAAGACTGTCATTACTAA Gene GeneID:616105|TFF2:NM_001083521:44_cdna Constitutive 0 NULL GeneID:616105 1 GENE TFF2 MGC139191 trefoil factor 2 EMBV3_20950 TAAATCTAATGCATTGGTTTATATGTTTTTCATGGAAAAAGTATGTCTCTAAATAGTTAC Gene GeneID:504440|EXOC1:NM_001102484:89_cdna Constitutive 2 NULL GeneID:504440 6 GENE EXOC1 MGC165876 exocyst complex component 1 EMBV3_21906 AAGGGAGAATCTGGAGGAGCAGTTTTCCTTGAGCGGAGACTCAGGTTTTTTCAGGTGGGC Gene GeneID:515440|C2:NM_001034492:126_cdna Constitutive 0 NULL GeneID:515440 23 GENE C2 MGC127363 complement component 2 EMBV3_43260 AGGCCTTGTTCCTTTTCACTACCTTGACTTCTCTTTCTGCTCCACACGCTGCCTACGGGA Gene GeneID:507867|ANKZF1:NM_001024497:62_cdna Constitutive 0 NULL GeneID:507867 2 GENE ANKZF1 FLJ10415 ankyrin repeat and zinc finger domain containing 1 EMBV3_18143 CTGCCGGGTCAGTCTACTGTACTTTATATTTGCTGGAACTGTTTTGACTTTGCTCATGGG Gene BVV0101_056673 + 1 EMBV3_11025 GK000009.2:66999574-67019075 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28300 GGACAGCGGGGACGCCGCCCAGTCCGCCGGGAGCTTGTTCTTGGAGAACAGACCATCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40030 GCAAAGTGCAATATTTTCCCTAACCTTCGGATGTGGGAGCTTGGATCAATGTGGAAGAGG Gene GeneID:524645|DCAF6:XM_002685817:19_cdna Constitutive 0 NULL GeneID:524645 3 GENE DCAF6 IQWD1 DDB1 and CUL4 associated factor 6 EMBV3_05518 TCCCTGTAAAATGGCTCTTGCAGGGCCTAGCTGTTTTTAACTTTATTCAAAACAATTTTG Gene BVV0102_238779 + 0 NULL GK000008.2:104010288-104101560 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29455 AGACTGAAGAGGAAGGAACCATCCCAAAATCATTCTATGAAGCCACCATCACCCTGACAC Gene BVV0102_002319 + 0 NULL GK000013.2:36833273-36899557 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37206 GAGTACTGCAACTATACTTCAGTTAAAAAAAACTCACTGTGTTATTCCTCCAATATGAGG Gene GeneID:527553|CRP:NM_001144097:293_cdna Constitutive 1 NULL GeneID:527553 3 GENE CRP NULL C-reactive protein, pentraxin-related EMBV3_06352 ACCCCAACATACCTAAAGAGTCCTTTCCAGGTCATCATCAGCTCCCGAAGTGGCTCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37957 ATGCCATTGTCTTCTCTCAGTACCACCAGACCTAGACCTGCACCATTCGTGGTATAAATC Gene GeneID:534615|BNIP3L:NM_001034614:4_cdna Constitutive 0 NULL GeneID:534615 8 GENE BNIP3L MGC127933 BCL2/adenovirus E1B 19kDa interacting protein 3-like EMBV3_09110 CCTCCAGGAAGTCCCAAAGGACTCTTAAACTAAGCACAAAATGGCACGCTGCAAAGACAC Gene BVV0102_407614 + 0 NULL GK000022.2:19205962-19647228 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12452 GTTGAAAAAAGGACGCAAGACTGGCAAGTGGCCCAATGAAGCTATACACTGGTATCACTG Gene GeneID:538509|C13H10ORF97:NM_001076107:136_cdna Constitutive 3 NULL GeneID:538509 13 GENE C13H10ORF97 MGC139777 chromosome 10 open reading frame 97 ortholog EMBV3_08214 TGGGCTCAGGATCTTGCTGGGAGGTGCGGGAATAATCTGCCAGCCATTTTGGATGTCTTT Gene GeneID:513711|RBM23:NM_001075636:146_cdna Constitutive 1 NULL GeneID:513711 10 GENE RBM23 MGC139382 RNA binding motif protein 23 EMBV3_22546 GGTCACTGTCAGTCTTTGCACCTGCTTTCAGTGTTATTGTGAAAGGTGTACTTTGTGCTC Gene GeneID:511147|CDK13:XM_002686897:83_cdna Constitutive 2 NULL GeneID:511147 4 GENE CDK13 CDC2L5 cyclin-dependent kinase 13 EMBV3_33093 CCTCCTCCTCACTGTCTCTAGGGTAAATATGGATCTAAAGCCCAGAAATTTGAATAATGT Gene GeneID:281008|AQP4:NM_181003:4_cdna Constitutive 3 NULL GeneID:281008 24 GENE AQP4 NULL aquaporin 4 EMBV3_13793 CACCCCTAGCATCCCCCAGGAAATATCTGATTACCTAGCCTGCCTTCAGCAAGAATCCTG Gene BVV0102_180267 - 1 EMBV3_40326 GK000022.2:31769467-32285751 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03955 TGTGTGACTTCACCGAGGATCAGACCGCAGAGATGAACGTGAAGGTACTGGACTTTGAGC Variant GeneID:281341|MYL6:NM_175780:893_cdna 62^205 10 EMBV3_39172 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_27351 TTCCATCTCCATCAGCAACCCATCAACAGTCCCCCTTCAGGCACTCAGTTATTCACATGG Gene BVT0102_355365 + 1 EMBV3_25746 GK000004.2:50310289-50323244 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09641 AAGGTGGCTTTGGAGCGGCTCCTGCCGCAGTCCAGAGCACAAGAAAGCAACCAACAAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19783 ATGTAGAATTAGGGACCTCCCTGGTGTTCAGTGGTTAAGACTCCATGCCTCCAATTCAGG Gene BVV0102_358121 + 0 NULL GK000007.2:76022777-76555884 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07239 GTTCTCCCCAACTACTTCTGGATGGTCAGTGGCTACAGAGAGCCCCCACCCTCTCTGAAA Gene GeneID:618605|SPHK1:XM_002696204:243_cdna Constitutive 1 NULL GeneID:618605 19 GENE SPHK1 NULL sphingosine kinase 1 EMBV3_23300 GCTGAGTATTGGGCAGTCTCATCTCTCACTGGTGAAAATGTCCGGGAGTTCTTCTTTCGT Variant GeneID:282028|RAB34:NM_001033612:28_cdna 849^960 1 EMBV3_06865 GeneID:282028 19 GENE RAB34 MGC127952 RAB34, member RAS oncogene family EMBV3_40201 CCTTGACTCCAGAAGAAGATGAGACAGAGAAATCCAAAGAGATGAGCGACAGACCCCGTG Gene GeneID:618905|FAM71D:NM_001046625:229_cdna Constitutive 0 NULL GeneID:618905 10 GENE FAM71D C10H14orf54 C14orf54 MGC133864 family with sequence similarity 71, member D ortholog EMBV3_36251 GATGCAGAGTGCATCTGCTTTGAGTTAGCAGACATGCTTAATTACCCATTGACTCTCTTT Gene GeneID:539820|TRIM6-TRIM34:NM_001046461:353_cdna Constitutive 1 NULL GeneID:539820 15 GENE TRIM6-TRIM34 MGC137351 TRIM6-TRIM34 readthrough EMBV3_14202 ATGCAAACCCACAGGCGAAACACCCACACACTCACACGGAATTTTACCTTCCTCCTGTAG Gene GeneID:528817|NEUROD2:XM_002695959:272_cdna UTR3_Alt 1 NULL GeneID:528817 19 GENE NEUROD2 NULL neurogenic differentiation 2 EMBV3_02391 GCCTGGTACATCGGCTTCAAGGTATATGAGTCTTGATATTGAGGGTTGTGACAGGGATTA Gene GeneID:516094|CDC7:NM_001037468:141_cdna Constitutive 3 NULL GeneID:516094 3 GENE CDC7 CDC7L1 MGC128732 cell division cycle 7 homolog (S. cerevisiae) EMBV3_34367 TCTCCTACTGGCTATTGGTCTGCTGGTTGGTGGTAACTGTGGCAGAAGGACAAGAAGTGG Gene GeneID:100295382|LOC100295382:XM_002688369:207_cdna Constitutive 0 NULL GeneID:100295382 6 GENE LOC100295382 NULL hypothetical protein LOC100295382 EMBV3_09004 ACCTTTCGCCAGGAGCTCCAAAATATCGAGATTCTTGAGCAACAGCTTCAGCAAATGAAA Variant GeneID:509524|C11H2orf39:NM_001037591:99_cdna 756^965 1 EMBV3_37494 GeneID:509524 11 GENE C11H2orf39 C2orf39 FLJ32660 MGC133970 chromosome 2 open reading frame 39 ortholog EMBV3_33306 AGACTCAGCCTGGAGACCCTTCTTCATTGTTAGGACCCCAAGCAAACACAAGTCACCCAG Gene BVT0102_242574 + 0 NULL GK000026.2:45840712-45848825 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152530 1 XLOC_092361 Coding TCONS_00152530 XLOC_092361 Coding Coding ADAM12 26:45845264-46238138 j TSS113748 4303 1 TCONS_00152530_10 917 24 0.989108439622982 1.71410136337536e-05 5.67546472578071e-05 0.000132260706435851 4.42117619792718e-40 9.57276078586235e-06 1.89279351709359e-05 5.03711604753694e-06 2.46021854795656e-05 6.39931246578057e-05 9.11117970955487e-06 0.000306151932420588 1.93301279446588e-12 8.27469114995624e-21 5.1781057226969e-15 2.28149349334191e-24 0.000472750018512725 4.51651349910826e-28 1.7492345087828e-05 7.08496529990149e-06 5.12819550976904e-26 3.17046767003684e-51 1.58387023876259e-30 9.63199456684073e-06 0.000140933536702969 8.98940614504443e-05 3.1194927133726e-05 1.65157446533101e-25 6.0269418841748e-05 2.00582711257015e-18 2.04924418174953e-05 NM_001001156.1 ADAM12 Bos taurus ADAM metallopeptidase domain 12 (ADAM12), mRNA. 0.0 5824 99.82 0.753660237043923 XM_005270188.1 ADAM12 PREDICTED: Homo sapiens ADAM metallopeptidase domain 12 (ADAM12), 0.0 3422 83.39 0.752033465024402 TCONS_00152530_10 sp|O43184|ADA12_HUMAN ADA12_HUMAN Disintegrin and metalloproteinase domain-containing protein 12; 0.0 1479 81.45 0.998909487459106 0 coding 0 0 0 0 -0.24146727303488 0.363194956413816 -0.024224389456372 0.638880265341197 GCTCATTTATTGCAACGGTCAAGGCTTGGCCCGTGCCAGCACAGCGCGCGCGCGCACACACACACACACACGCGCGCGCACACACACACGCCAAGGGAAAACTTTCTTTTAAAAAAATGAAAGCTTAGACGAGCTCTTCCGCGGCCCGAGCGCTGCGCGAGGGGGTTCGGAGCTGCCTCCCCGCGGCAGGAAGTCCCCGCGGGTCGCGACGCCCGGCCCCTGCCCGGCGCCCGCGGGGGATGGTGCAGCGCCCGCCGCCCAGCCCGAGAGCTGCCGCTGCACCGAAGGCCGGCGACGATGGCCGCGCGCCCGCCGCCCGCGCCCCCCGCCCGCGCCCTCCTGCTCGCCCTGGCCGGGGCTCTGCTGGCGCCGCGCGCGGCCCGAGGGGTGAACTTGGGAAGCCAGTTTGTGCCTTCCATGCAGCAGGCCGGGACGAGGGATGGGGCAGGAGCCTATGAAGTGGTCAGTGTCTCTCTTTTGAATGGAGATCCATGGAACCCAATGAAGACTGCAGACTCAGAGAATCACCCAGGAGTGTTGAATTTTCGAATACAACTGACAAGCAAAGAGCTGATCGTGAACCTGGAAAGAAATGAAGGTCTCATCGCCAGCAGTTTCACGGAAACCCACTATCTACAGGATGGCACGGACATCTCTCTCATCCGAAATTACACAGGTCACTGTTATTATCATGGACGTGTGCAAGGCTCTTTCGGATCGGCGGTCAGTCTCAGCACTTGTTCTGGTCTCAGGGGACTCATTACATTTGAAAATAACACCTATATTTTGGAGCCAATGAAAAATGCAACCAACAGATACAAACTCTTCCCAGTGGAAAACTTGCCGGGCACCTGGGGATCATGTGGATCAAATACGTCGGGCCTCACTCTGCACGACAGGCTTCCACTGGCCTCCCAGACCCAGACAAGAAGGCAAAAAAGAGAGACCCTCAAGATGACCAAGTACGTAGAGCTTGTCATCGTCGCCGATAACCGAGAGTTTCAGAGGCAAGGAAAAGATCTGGAAAAAGTCAAGCAGCGATTAATAGAGATCGCTAATCACGTTGACAAGTTTTACCGACCACTGAACATTCGAATCGTGTTGGTGGGCGTGGAGGTGTGGAATGACATTGACAAATGCTCCATAAGTCAGGACCCATTCACGAGCCTGCATGAGTTTCTAGACTGGAGAAAGATGAAGCTTCTGCCTCGCAAATCCCATGACAACGCACAGCTCATCAGTGGAGTTTATTTCCAAGGAACCACCGTCGGCATGGCGCCCATCATGAGTATGTGCACAGCAGAGCAGTCCGGGGGCATCGTCATGGACCATTCAGACAGCCCCCTGGGTGCGGCCGTGACCCTGGCACACGAGCTGGGCCACAATTTTGGGATGAACCATGACACCCTGGAGAGAGGCTGCAGCTGCAAGACGGCCGCCGACAAAGGAGGCTGCATCATGAACCCTTCAACCGGGTTCCCGTTCCCCATGATGTTCAGCAGCTGCAGCAGGAAGGACCTGGAGGCCAGCCTGCAGAAGGGCATGGGCATGTGTCTGTTCAACCTGCCGGAAGTGAAGCAGTCCTTCGGGGGCCAGAAGTGCGGGAACGGATACGTTGAAGAAGGAGAGGAATGTGACTGTGGGGAACCAGAGGAATGTCAGAATCTCTGCTGCAATGCCACCACCTGTGCCCTGAAGCCAGACGCTGTCTGCGCGCACGGACTGTGCTGTGAAAACTGCCGGCTGAAGCCGGCGGGAACCGCGTGTAGGGACCCCAGCAACGCCTGCGACCTCCCGGAGTTCTGCACTGGGGCCAGTCCTCACTGCCCAGCCAATGTGTACCTGCACGATGGGCACCCATGCCAGGGGGTGGATGGCTACTGCTACAATGGCATCTGCCAGACCCATGAGCAGCAGTGCGTCACCCTCTGGGGACCAGGTGCTAAACCTGCCCCTGGGATCTGCTTTGAGAGAGTCAACTCCGCAGGTGACCCTTATGGCAACTGCGGCAAAGATTCCAAGAGCTCCTTTGCCAAGTGCGCGATGAGAGACGCCAAGTGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGACCAGTCATTGGTACCAATGCCGTTTCCATAGAAACGAATATCCCCCTGCAGGAAGGAGGCCGGATTCTGTGCCGTGGAACCCACGTGTACTTGGGTGATGACTTGCCGGACCCGGGGCTCGTGCTTGCCGGCACAAAGTGCGCAGATGGAAAAATCTGCCTGAATCGTCGGTGTCAGAACGTCAGTGTCTTTGGTGTGCATGAGTGTGCAGTGCAGTGCCACGGCAGGGGGGTGTGCAACAACAGGAAGAACTGCCATTGCGAGCCCCACTGGGCACCTCCCTTCTGTGACAGGTTTGGCTTCGGAGGGAGCACGGACAGCGGCCCCGTCCGGCAAGCAGATAACCAGGGTTTAACGATAGGAATTCTGGTCACCATCCTCTGTCTTCTTGCTGCTGGATGTGTGGTTTACCTCAAAAGGAAGACGTTGATACGACTGCTGTTTACAGATAAAAAAAACACCATCGAAAAGCTAAGGTGTGTGCGCCCTCCCCGGCCCCCCAGGGGCTCCCAGCCCGGCCAGGCCCACCTCACCCACCTCAGCAAAGGCCCGACGAGGAAGCCGCCACCTTCCAGCACACCTAAGGACAACACCCGGAGAGTGCCGCCATGTCAGCATGTGGACATCAGCAGACCCCTCAAAGCCCCCGACGCCCCTTGGCCGAGTTCCCCGCAGCGAGGGCTCCCACCCCTGCACCAGGCTCCTCGTGTGCCCTGCGTCCCCGCCAGACCCCTGCCGGCCAACCCTGCACTCAGGCAGGCCCAGGGAACTCGTAAGCCAAGCCCCCCTCAGAAGCCGCTGCCTGCAGACCCTTTGAGCAAGACGGCTCGCCTGGCCGGTGCCCCAGCCAGGTCCCCGGGACGGCAGGAGTCTGCGCTCCGCCTGGCGCCCATCAGACCTGCTCCGAAACAGCCCCATCCCGTGCCCAGACCCGCCCCCATTGCCTATGCTAAGTGAGAAGCAAGCCGACACCTTTGTTCAACAGTGAAGACACAAGTTTGCACTATCTCTCAACTCCAGTTGGAGTTTTTTTTTTTGTACCAACTTTTAGAATTTTTTAATTTTTCAAACACCACGATTTGAAAGAACTTTGAGCTACTGCCGTCGGTGCTGTGCTGTGCTATGGTGCTCTGTATACTTACTTGCTCAGTGTGCTTTTCCTGACACATGGACTCAGATGTGTAGCAACCGAGAGAAACGGTGCATAACATTTTCCATTGTCAAACTGTGCATCCAGAGACTGCCCTTCCCCGTGTGAACTTTCCAGCTTCCACATGTGGGGTGACATCACAGAGACCACAAGAGCGACAAATTAAACTACACGAGGATAAGTACTCCCAACTAGTCTCAGAGGGGACTCTTTTTATGCCTTCTTAACTTTATTAGGAATTCTCAGGCTGAAACCAGAGGCCATTGTTCCCTGGCAAATCCGTACAACATATCCATATCTCCTCCGAAAGAAAAACAGCTCAGACCCTGCTCTGTGGCAGACTCTTCCTACGAGACTGTGATCTCCCGTGGTGCTAAACAGAGCCTGGTACTGGGCCAACTCGAATGCTCGAGCGTCTTCCTGCCATCTCTCAACTGCTGTTTACAAGCATTCTGAGCCACTGAGACCCCAGTGACCGGGAGGGCGCCATACCTGGGCGACAGCCTGATCCCCCTACCAGGCTCTCGGTGTGAGGCTTATTTCTTTTAAGACTCTTGCCCTGGAGGGCTCCCCAGGGTGTTTGGGAAGCAGGAAGCCCCAGGGAGGGCAGACTCAGCCTGGAGACCCTTCTTCATTGTTAGGACCCCAAGCAAACACAAGTCACCCAGGTAAACGTCACACCCAGAAGTCTCTCCAGGGCCAGTGCTGGCCCCCAAGGGGGATTCAGGCTGTGGGTCCGCCCCACATGATGGCTGGTTGGCGGGAGCCTGAGGCGTGCCACCTCATCTCCCCAGGACTCGAGAGAGAAGGCGGTGAACACATCTGGACACAGGTGGCCTCAGCTAGCATCTCTCCCTATCATCAGACCCAAGTTCCTTCCCCAGCCCTAATCCAGTCTCTGACACATCTCTGCAGTTTGGTGGCTGCCCCGCAAGTCCACCCAAAACCCAGCCTTCTCCAGGGCCACAGCTGGAAGCAACCCTGCCCACTCCCTGCTCCCCACACCCGCCACCCCAGCAGGGAATACAGAAGCATCTACCCTCCGGCCAGGCACCTCCC EMBV3_26985 CTCTGGCCACGGTGCTGTGTGAGGCAGGAGGGTGTGAAGGTCAAAGGCCTCATCCTCATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35791 GCCTGGTTGTCCAAAGCACAGAGCATCCCCTTTTCATCTTTTATTTCCTCTGTCTGAAGC Gene BVT0102_330444 - 1 EMBV3_24146 GK000027.2:14699713-14706020 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155967 1 XLOC_094895 Coding TCONS_00155967 XLOC_094895 Coding Coding LRP2BP 27:14673824-14704960 j TSS116614 2599 1 TCONS_00155967_4 348 0.117352828010773 11 0.916878111450137 0 1.23668642457245e-93 2.17390398597172e-162 0 7.21276773074125e-56 1.00134121015984e-117 2.98665444604527e-05 5.37635000430594e-215 3.57117209966783e-95 1.84731374382579e-05 1.5371075606476e-130 6.49082637651611e-06 4.34093823299678e-06 6.10633696405653e-05 4.74496752047918e-57 3.86516206845684e-60 0 1.85815436704469e-71 3.12692158721429e-243 6.81516375168822e-316 7.48804753609434e-79 5.00898276439093e-106 8.44289772410886e-156 6.6621705057071e-05 1.57307578010263e-230 4.27118787414585e-115 1.29354449680437e-90 4.47157779897533e-148 1.19722205397685e-155 2.31329373352923e-06 XM_616622.7 LRP2BP PREDICTED: Bos taurus LRP2 binding protein (LRP2BP), mRNA. 0.0 3341 100.00 0.71219699884571 NM_018409.3 LRP2BP Homo sapiens LRP2 binding protein (LRP2BP), mRNA. 0.0 1393 87.72 0.429011158137745 TCONS_00155967_4 sp|Q9P2M1|LR2BP_HUMAN LR2BP_HUMAN LRP2-binding protein; 0.0 665 91.09 0.997126436781609 4 coding 0 0 0 0 -0.0964997713606101 0.653889242257274 -0.0245746615316068 0.66289156912637 AGTTCCTAAGCAGTTTTTTTTTTTCTTCTTCCCCAGGTTAATCTAGCTAAAAGCTAAAGTTCCAACCATGTATTTATTTTCCCTAATATCTTAATCTGTTCCCCTCTATGTGCTGGTACCTTTTGAGAGCAAGACTGAAAGTTTATTCTTTTTTTGGAGAACAAGCTCAGTGTCCTCTGAAAATAGATGGGTGGCCTTTTTGTTCTAATTTTGGATACAGTTTCTTGTTTATTTTGTAATAAGAGCCGTAAACTAATTTTGCAGTAATTTATATTACTAGATTTATGCAGTTGATCCAAGGTGTCAACTTAGAGAAAAATGTGCTGCATGAGAGGTGTGAGTTAAAGTTTATTCAGGGTTTTACTGAGGACTGTAGCCCCAGAGACAGCCTTCAGATAGCACTGAGGAACTACGCCAAAGAAGTGGGGGTGGGGAAGCTAGTTTATATGTGATTTTTTTGATGTTAGGGAATACATGCAGTCAACATGTATCTTGGTAAAAAAATCACTGCTAGTTACAGAGAACAAATATTCCAAGTTAATGATTATAGTGCTTTTCTATGTATGGGAAGCAGAATTCATTAAAATTCTTCGGGAAATGCATTTAACTAAGGGCCTGGTTGTCCAAAGCACAGAGCATCCCCTTTTCATCTTTTATTTCCTCTGTCTGAAGCACTGAGTGCACCTCCTGTTACCACCTTAATCTCTTCATCTGAAGTATCCAGTGCCTTGCTGCCTCAAAGACTTGAATACCCACTGTGGAGACAGGATGAAGTTGACCAGTGAAAAGTTGCCCAAGAACCCCTCATATACTTCTCTATCCCACTTCGCTGCTAAGAATGCAAAAGTCTTCCAGTGGAGAAAGGAAAAGACTGATCATTACAGCCATGCTAATTTGGTGGATAAGGCCTTGCAGCTCTTGAAAGAAAGGATAAGAAGAGGGGATACTATGGCATATTTTCTACGAGGTCAACTGTACTTTGAAGAGGGATGGTATGAAGAAGCATTAGAACAGTTTGAAGAAATCAAGGAAAAGGATCATCAGGCAACTTACCAGCTAGGAGTGATGTATTATGATGGCCTGGGGACAGCTGCAGACTCTGAAAAAGGAGTGGAATATATGAAGAAAATTGTTGATTCTCCATGCCCCAAAGCAAGACACTTAAAATTTGCAGCAGCTTACAACCTTGGAAGAGCTTATTACGAAGGAAAAGGTGTTAAACGATCAGACAAGGAAGCTGAAAGACTGTGGCTTTTTGCGGCAGACAATGGGAACCCAAAAGCTAGTGTGAAGGCTCAGAGTATCCTAGGATTGTATTACTCAACAAAGGAGCCCAAAGAGCTTGAGAAGGCATTTTATTGGCATTCAGAAGCTTGTGGCAATGGAAACCTGGAGTCCCAGGGTGCCCTGGGGCTCATGTACTTCTACGGACAAGGTATCCGCCAAGACACTGAGGCTGCCCTGCACTGCCTGAGGGAAGCAGCGGAGCGTGGCAATGTCTATGCTCAAGGGAATCTCGTGGAATATTACTATAAGATGAAGTTCTTTACAAAGTGTGTTGCATTTTCCAAAAGGATCGCTGACTATGATGAGGTTCACGACATCCCCATGATAGCCCAGGTCACGGACTGTCTCCCGGAATTCATCAGCAGAGGCATGGCCATGGCCTCTTTCTACCACGCGCGGTGTCTGCAGCTCGGCTTGGGGGTCACAAAGGATGAGGCGACAGCCAAACGCTATTATTCTAAAGCTTGTCGTCTGAATCCTGCATTGGCAGATGAACTTCACACTTTACTTATTCATCAAAGAATTTAGATCACAATGCACTTCAACAAAGATCATCGATTCTAACAGCTTAGAATAACTTATGTTTTATATCAAGAACTTGGCAGGAGCAGAACCCAGGCCTCACCTGGAATGTTCTCGAGCAGCTTCTGCTGGGCTCTCTGCTTTGTTTCCTGGCTGCGCGCGCGGCTTTGTTCTTGGCGTGGGATTGTGTTTGGCGGTGCCGGCTTCCCATTGGGCCAAAAAGCATCCCGGAAAAGGTTGATGTAGTAAACCAACATTTGCTCACTGAAAATCCAGTTCACTGTGTCCCGAATTTGTCTTTTAAGAGAAAACTACGTCTCAGATGAGGTTTTTAAAAATTGTATTCTCTCTTTCTCAAAAGGCATTTATCAGTGGGTAGGTTAAGATACAGTGTGATCTAGGCGTTTGATGAATAAACTAGGAATTGGATTTTTAAACACTGACTCTGAAAGTTATTTTTCATTTTGGTAACACTGATGGCCATTCATTCCTGCAGCTCACATTTCCACTGTTACTGACTTCTCTAAATGTTTGCCACACGGTGTCTTTCAATTTTGAAAGGCAATAACTGAGAGGAGATGGATTCATTTGAAGTTGGCAACTACTCTAACTGTGCACGGTACTTAACATACTAATTTCTCCATAAAGTGTTGCAAGCTGAAAACATCCATCCATGTAAAGACAGCGAAAAATGGCCTGAAGACCTTCCTGAGCTCTGGCAGTCCCGGGGAGAAGCAAGCTTTTTCACTGGTCGTCCCTTGGGGCTGCTGTGGAAGGGGGTGCTGGGCGG EMBV3_33614 CCCTGGCGCTTAGGTTCTACCCTGCAGCAGGATGAGGATAACTTTATGAAGTTTGTAAAT Variant GeneID:527479|AGBL3:XM_002686962:38_cdna 469^576 2 EMBV3_22500 GeneID:527479 4 GENE AGBL3 NULL ATP/GTP binding protein-like 3 EMBV3_10885 AATGTTCCTCGGGGACACTAACACCTGTTGGGAAGCTAAGATTTTCAGTACCGGCACAGC Gene BVT0102_073501 + 0 NULL GK000018.2:15075290-15089440 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085580 TCONS_00085583 TCONS_00085587 TCONS_00085586 TCONS_00085584 TCONS_00085579 TCONS_00085585 TCONS_00085582 TCONS_00085581 TCONS_00085588 1 XLOC_051908 Coding TCONS_00085582 XLOC_051908 Coding Coding MYLK3 18:15085610-15092698 j TSS63866 4278 1 TCONS_00085582_1 99 0.275596072931276 4 0.39692394525187 0.00149478518858153 0.000336068833351219 0.0012147647096996 0.00137426983159338 0.000526511402506955 0.000343316780621545 0.000632782938335328 0.000828864704901669 0.00024123082672746 3.24294243752637e-08 1.44810338123332e-09 1.80440470511679e-10 9.550110018491e-11 4.42533988009864e-10 5.29596790679008e-05 1.51101791053104e-06 2.31473043277287e-19 3.09066001559711e-16 0.00100365547535886 0.00199769833902724 9.00947847131763e-11 8.28815348397678e-12 9.04589368446551e-12 2.58858633195185e-17 0.00173705466595153 9.06953276605432e-07 0.001145388259807 7.02719146789939e-16 6.27955630687884e-11 2.57402257148616e-07 XM_005192684.1 MYLK3 PREDICTED: Bos taurus myosin light chain kinase 3 (MYLK3), 0.0 1216 100.00 0.157316503038803 NM_182493.2 MYLK3 Homo sapiens myosin light chain kinase 3 (MYLK3), mRNA. 0.0 693 84.60 0.141187470780739 TCONS_00085582_1 sp|Q32MK0|MYLK3_HUMAN MYLK3_HUMAN Myosin light chain kinase 3; 3e-63 207 93.94 0.98989898989899 0 coding ACTCAAGTGGGAAGGAGAGGGGCCGACAGAGCAGGGCTCAGCTCACGCGTCTTCTAACCTTGTCCCTCTGCTCCCCGTTTTCTCTGGGCTGAGGAAGTAGAGACTCAGTGGTTTGTCCCCATTTCTAGGAGAAACAGACGCAGAGACCATGAATTTCATTGTGAACTGTAACTGGGATTTTGATGCTGATACCTTTGAAGGGCTGTCAGAGGAGGCCAAGGACTTTGTCTCTCGGTTGCTGGTCAAAGAGAAAAGCTGCAGAATGAGTGCCACACAGTGCCTGAAACATGAGTGGCTGAATAATTTGCCTGCTAAAGCTTCAAAATCGAAAGTTCATCTTAAATCCCAACTATTGCTGCAGAAATACATGGCTCAGAGGAAATGGAAGAAACACTTCTACGTGGTGACTGCTGCCAACAGGTTAAGGAAATTTCCAACTTGTCCCTAATCCTCAACTCTGCTGCTCCTGTGGGCCTAGAAATTACTGGGACTGCTGGTGAAATCATGACTGAAGATTCTTAATAATGTGGCTTTCTACTTATTTTGTTTCAAAAATGTTACGACTGTTGCCTTCCTTGTGGATGAAAAGTGACTGTAAGAAAGTGACCTAAGAATTTTTTCTGGTTTGTAAGATCACTGAGTTGAAATGATGTGGTTACTTTTCAAGTGTACCTACTTTTGGTGATAAGTATAGGCATGCTTTAAGTCGTAGGTAGGAAAGCTCCTCAGAGAAGGCAATGACACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTAGGCTGCAGTCCATGGGATCGCTAAGAGTTGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATAGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCACACAGAGTCGGACATGACTGAAGTGACTTAGCATAGCATAGGAAAGCTCCTACTTTGCATATGTCAACTTTAAAGTCAGCTTACTTTGATTAAAGAGCCCAGTGGACTATCACACAGGGCATGTTAGTCAGTGTTACCTCCTCCAGTGCAAAGAATTCCTAGCATTTTGATTTGCTCAAAATTGAGCTGACATTTTGTACGACATTTGTTGCTCTAGTGTCAAGCAATGTAAATTTAGGGCAGAGATTCTCAAACTTGTTTTAGCTTGTACTCCCTTTCGAGAATCAAAACATGCAGACCTCTAGCCTCTCCTAATTCTGCCCTGTCCTGACACTGGCAGTCTCCATCCTAACCTGTCTTTCTCAGTTATGAATCTATGGTCTAGTAAGTCTGGGAACTGATATGTAATATGTGAAAAGAGAGTGCAATGGTGTTCAGCTTTCTGAGAGAAACACAGAAATGATGGATCGTGAGAAGTCAAATGAAAACTGCTCTCCTGCTTTATGGGGATAGAACCGTCACTTAACTAACTTCATGAAATGAGTAACAAGGAATGCTTTATTATTCAAAAGTAAATATTCCTTTTAATTTCCTCACTGCTAACTTGATTTTCATTATATTCCCCATGACCTTCTTGGGTCAGCAGTTTTTACTTTTAGTTTGTAATTAGCCATGCAACAGTTTCACATTTTTTTGTCCCATAATACTTTTTTTTTTTTTTAAGTAGAGGACGTGGGTGTGGGGAGAAGGGCAGAAGATGGAGAGATTAATCCTCCTGATGCATTTCTTCGGTTATAATGTTCCTCGGGAACACTAACACCTGTTGGGAAGCTAAGATTTTCAGTACCGGCACAGCTCGGCCTGCTGCAAGCTGACTGGCTAGTGGATGACTATCAGAAGAGATGGCTGCTGGAAATCTCTCTTTCATGGACCAGTAACAGTGGCTTAGTAAAATGCTTTAAGGTGTTTTGAAAGCAGCCTCAGAAAGAGCTAGAGGATATCTATAGTTCTATCTATAGTATGGTTATTCTTCCCCTCCACAGTGGGGGGAATGCTATGAATCTTCTCCCCAGAAATATGGAGTCTCCCCAGTTAGTTATTCTAATCTAGAACACCACTGCCTAACAGAAATATATGAGTCAAATACATAATTTTAAAATGTCTGATAGCTTCTCTTAAAAAAAATCTGCTAAAATTAATTTCAATAATTTATTTAGCATAATATATCAAACATTTAAATATCTAATCATTATAAAAATTATTGATAAGCTATTTTATATTCTCTTTTTCATACTAAGTCTCCAAAATCTGGTGTGTATTTTATACTTAAAATACATGTCAGTTCAGATTCTAGGTTTTTATCAGACATAATTTGTATTTAGATTTCATAAAATTTACTGTGGAAAAATATATTCACATGCTCAAGTTATTCAAAGCATCTTAAATATTTTCTAGTATTTTTACATTTAATAAAAATTAGGAATTAGGAATTCAGTTTTACAGTTGCATTAACCACATTTTAAGTGCATTTAGCCACATATGGTTTGTGGCTTCTATATGATAGGACAGATCCAGGGAAAATCTAATAGTTATCAAATTTTAATTTTCCCATATATGCTGTAATTCTCTACCTAAAGAAACAACTTTTCTCCAAAGTCCCTTTGAGGGATTTGTTTAGGCCAGACCCACACAAGTGAGAGTTACTGCAGAAGTTAGCCTCCCTTATTTGAAATGTGAGGGAGTTTTTATGAAGCTTTAATTTTCTGGATATATTATTAAAAATTTTCTGGATATTTTTAGTTCTCTGCTGGTATGTACTGAACTCAAAATTTTTTTAGACTGACGCTTTGCTAGTATTAACTATTTCTAATGGGACTTTTAAATTTGAACGAACAGTCCTTAAAAACTGCTGAGAGATCCAATATAAAATAAAATTTTTTAAAAAGAAAGAGAACTGCCCAGCAGAGGAAATCTGAAAAGTAGTCATGACCCACATTTTATCTATGAGATTTAGTGGGAGTGTGAGCAAAACAGAATTTTTCACTCTTGATGAATATCAAGATGAATATCAAGTATCCAATCCAAATAAAAGTCATGCCCACACTTTCACCCAGCAATTCCATTTCTAAAAATTTATCTCTCAGCAATATTTGAACCAGTGGGCAGAGGTGTATGCAAAATGACATTTACTGTAGCAAAATGGCCCAATGAACCAACCTACATGTGATTATCAGTATGAGTTTAAATTTTGCCACATACGTATAGGAGGTTGCCTTGTAGCTGTTAAAGATAGATCTTGATGTACTGATTTTTATTATGAAAAAATTATGGAACATATATATGGTATTATCCTATTTGTGAAGACATGTTTATATATGTGTTAAAATTTTCTAGGTTATGCAAGAAACTTAACAGTGGAACGTGGAAATTGGGTGATGGGGAGAGAGGGAATTCTACTTTTCACGTTATTTCTGAATTATTCTAATTTTTTTAACAATGAGCATGTATTGCTTTTATAATTAAAAATTAGCCACCTCTTGTCAAGTGTGGACCCTGTCTTGACCCTGATTTAAGCAAATAAACAATAAAGATATTTCAGAGACATTTAGGGAAATTTAATTCTAAATTGTATATTTGATGACAGAACTTCTTTTTGTATTAATATTGTGAGGTATGATAACAGTAATGTGTTTATAATGTGGATTAAATGACTTCAAGAAAAAGGGAGATATAGTGAAGCAAGTGTGGCAAAATCTTAACTGTTGGGTTTGGGTAGTCAGTATGGGCTATCAGTGTATTTTCCTCTAGTAAAGGGACATACATTTGTTGTATACATTTGAAAACTTTCATGATAAAGCATTTTTTAATCAGTTAAATAAGCCAAGAGGAGCTGTTAAAGAAATGAGCTTCCAAAAATCTTTACAACAGCACTGGAATATATGAACCCACTAAGTAGAAAGCTTCCATTGCTGGGGAAAGAATGTGTTGAAAAATTGTAAAGGATTCCAGCTCCAGGAGAGCATTTGAACAAGACTATGTTAAGGCAATTCCCCTACCCCACAACTATTAGGTTGGTGCAAACGTAATTGCTATCTTAGATCGTGAATTTTAAATCATTTTAATTAGACTCAAACATATCTTTATTAATCAAAATAGGAACCATTACAAGCAACACATTTTTGCCAACAAGAAATAAATGTTTGTTTATTCCTGGAGCACAGAAGTCCATGCTTCGGGATTCAACGGGAAAGCATCTTCTGCCTCCTGATGGTTGTGGAAGTGTTTTCCCTGCAAAAAATTGTTGAGATGCTTGATGTAGT EMBV3_14895 AGGCTTGCCTGTTCAGAGTACCTTCTTACACATTCCAGTCATCCCAGTCGTGCAGTCTCA Gene BVT0102_240928 + 1 EMBV3_39721 GK000020.2:24660205-24783407 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114853 TCONS_00114854 1 XLOC_069373 NonCoding TCONS_00114854 XLOC_069373 NonCoding NonCoding - 20:24781729-24783196 - TSS85554 1467 1 TCONS_00114854_1 52 0.149284253578732 1 0 0.00192445702238585 0.00229462351882739 0.00239076448109993 0.00114591974488901 0.00198040396989402 9.26574707008238e-05 0.00152252129555999 0.000995866295077528 0.00273336900700058 2.79376358639455e-06 8.01033797591724e-05 0.000124205974938134 0.000153210934867477 0.000240486827606057 0.000307677766827221 0.000288060082523855 0 0.000530144069438581 0.00394230055470504 0.00241184333528791 0.000342476195358143 0.000510878709497762 7.50423408478088e-05 0.000345078494768512 0.0041293847881949 0.00190344467804107 0.00262155623574872 0.00022261437795784 6.61841564780556e-06 7.58188196166498e-05 NM_001105478.1 SSLP1 Bos taurus secreted seminal-vesicle Ly-6 protein 1 (SSLP1), mRNA. 1e-89 334 93.27 0.148602590320382 0 noncoding 0 0 0 0 -0.0405253625226338 0.772945271702526 -0.0218197523634079 0.643467610026881 GCGCGGGAGCGGCCGGGGCGCTGGTTCCTGTGAGGAGGGCGGAGGGGCGGGGGCTAGGGCTGCGAGGGCGGAAGAACAAACCGGGAAGAGCGGAAAATCAGCCGGTGCTGTCGTCGCCGGCGTTCTGTGTGCTTCCGTGGCCTCCGAGTTGGGTAAATCGGAACCGAACAGTGTTCCATAGGAGGAGAGCTGTAGGAAGCTTCCCCTAGTAGGAAGCTCGCGTTGAAACGTGGGAGGTGTAGAAGCCACAGATACTTAATGCCCCTCTCCGGAGCGATTTCCCGAAGGCCCTGTGGCCTTGAGACTGCACGACTGGGATGACTGGAATGTGTAAGAAGGTACTCTGAACAGGCAAGCCTGTGACTCGGGGGCTGCCCCTCCCCACTTTCAGGATGTGAAGCGAAGGTGGACAGCTCCAGCTTGATGTCCTGGGGGTATACAGAAGCCCCGCCCGCGGCTAGAGCTAACCTGGGAGGTAACCCTCTTATCAGAACGTTAGATTGCCCCCCGGAGAATCTGCTCTTCACCGACGGAAAAGAGCAAGAAAAAAAAGTTAAGGGACTGTGTATAAGTCGGTTGTAGACTCAGGACTCTCGGGAAGCATCAGTTGGTCAGTTCTTTGCGTGTTTTGTGCCCAGTTACACGGTACACCATTCTACTACCCCTGTGGGGAATGAGCAATAGGATGAGAAGCGCTCTGAAAAGACCCGAGTAATAGTGTTTGGCACCCGATGTCATTCTAAGCAGTAAAAGTATCTATCAGCAGCTACATTTGACGTGTGCACCTCCTGGTAAATAATGTGAAAACTGGCACCAGAATTTAAATATTGCATTCGGCGTGGAGGGAAAAAGCAGTTCAGGCTATGAACAACTAAATCTTAAACAAAAAGAGCCTTGAGTGTTCTTATCCTGATTCTTTTCTGATTCGGGCTTTTCTTCCTCCAAGTGTGTGTCTAAATTATACTTATGAAGAAATTACAGTGAGTTTTTGCTATGCAGAAGCTAACGAGATTCAGTAGCATCAAGCCCTCAGATCCAGTTTTGATTGATCTTGGCCTGGTGTTCAGTCAAAAACATGTACGTTAATAAGATTTTTGACGTGGATTCTGGAGGTGATTATCTACTGCAAAACTACAGCACAACTGGTTGAAACTAACTGCAGAAATTAAAGGCCTCTCAAACTTACTAACAACAGTAATTCAAACAGACAAGAAACGGATCCTTTTTTTTTCTTTCTCTCTATGAATTCAGTTCAGTTCAGTTCAGTTCACTCAGTCACGTCCGACTCTTTATGACCCCATGAATCGCAGCATGCCAGGCCTGCCTGTCCATCACCAATTCCCGGAGTTCACTGAGACTCACGTCCATTGAGTCAGTGATGCCATCCAGCCATCTTATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAAC TCONS_00113603 r 5' 53 TCONS_00113603 r 5' 53 EMBV3_39550 GGAGCAGCCCCAGGCAAGGATGCCACAATCTTACAGTTTCTACTCAAAGTTCAGCAGTTT Gene BVV0102_217435 + 0 NULL GK000011.2:21095041-21105339 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21267 GACTCACCTTCCCTCCTGGAACAAAGCGATGGTATCAGAGTTAGGACCCTCTAAGAGTGT Gene GeneID:617087|MXRA7:XM_002696202:237_cdna Constitutive 1 NULL GeneID:617087 19 GENE MXRA7 NULL matrix-remodelling associated 7 EMBV3_27851 CTGGCAGAGGGGGAACCAGGCGTTTTCCCAAGTGGCATTTTCATCTCACTTTCACCCTAA Gene GeneID:509931|FAM117A:NM_001101070:79_cdna Constitutive 0 NULL GeneID:509931 19 GENE FAM117A NULL family with sequence similarity 117, member A EMBV3_16360 TCTGTCGATCAGAATGTGTGGTTTATGGTGTAGCACAGTGATTGTGTTGATTGCTAACCA Gene BVT0102_056205 + 0 NULL GK000001.2:82294598-82301306 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004258 TCONS_00004256 TCONS_00004261 TCONS_00004259 TCONS_00004257 TCONS_00004260 1 XLOC_001002 Coding TCONS_00004258 XLOC_001002 Coding Coding MAP3K13 1:82298666-82458168 j TSS2141 6236 1 TCONS_00004258_6 966 15 0.960997109735989 0.000825250918652064 0.000277611379239392 0.000934505763690431 0.000862904079158815 0.00104230241714768 0.00102710339701235 0.00077137264977722 0.000915376400089473 0.000918099492319038 8.60298263922566e-10 7.66282583911249e-06 4.18800987940371e-12 4.36702808507658e-05 0.000165325934817943 0.000292545213727124 1.50330053652416e-08 9.33035273188777e-10 2.81359205500513e-11 0.00191538062610066 0.000796405152049541 0.00085361076300157 8.25469466001032e-05 4.94618047415664e-09 0.00010059915950332 0.00132896027489206 9.60338189844476e-05 0.00043780981473094 1.75118561623148e-09 3.82061073622796e-10 1.22862891250929e-05 NM_001101853.2 MAP3K13 Bos taurus mitogen-activated protein kinase kinase kinase 13 (MAP3K13), mRNA. 0.0 6026 99.85 0.537684413085311 NM_001242314.1 MAP3K13 Homo sapiens mitogen-activated protein kinase kinase kinase 13 (MAP3K13), transcript variant 2, mRNA. 0.0 5442 87.35 0.69964720974984 TCONS_00004258_6 sp|A7MBB4|M3K13_BOVIN M3K13_BOVIN Mitogen-activated protein kinase kinase kinase 13; 0.0 2002 99.69 0.998964803312629 2 coding 0 0 1 0 -0.0961307862099695 0.464405562455673 -0.041950905871682 0.485004509182255 AGCCGGACGCGACACCCGGAAGTTACGCCCTGGAGGCGGTACTCGGTTGTGGAGGGCGTCGCGATGGGCGGGGCGGAGCGTCCGTGGTCGTCCTGGAACCGTGGATTCCAGGCAGTTTTGCAGAACTCTGATATCTGTGGACGCTAATATGGACTTCATTTAAAGAAATCCACGGACCAGGAAAGGACAAAAACATGAATCAGTTTGTATTTTGGCATTCAAATCCTAGCACTTTGGGAAAGGTTCTGAAGCCCCCTCTTACATCAGAACTCTACTGTAATGATCCTCTGAGTGTCATCTCAGGACCTCGGGCACACTCATGGCACGATGGCCAACCCTCAGGAGCACCTGAGCTGCTCCTCTTCTCCACGTTTGCCTTTGAGTGAAAACAAAACCTTCAATGGACTACAAGATGACCTCGCACCTATGGGGAGCCACGCTTCCCCCAAGCTTCTTAAGGACCAGCAGGAAAAGGGCATGGTGCAAACTGAGCTAGCTGAAGGCACGAACAGCCCCATCACCACAACAGTGTTGACAAGCATAAGTGAGGATTCCAGGGACCAGTTTGAGAACAGCGTTCTTCAGCTAAGGGAACAAGATGAATCAGAGATGGCCATGTCTCATGGGAACAGCAACACTGTGGATGGAGAGGGCACAAGTGGAACTGAAGACATCAAGATTCAGTTCAGCAGGTCGGGCAGCGGCAGTGGTGGGTTTCTTGAAGGACTATTTGGATGCTTAAGGCCTGTATGGAATATCATTGGAAAGGCATATTCCACTGATTACAAATTGCAGCAGCAAGATACTTGGGAAGTGCCATTTGAGGAGATCTCAGAGCTGCAGTGGCTGGGTAGTGGAGCCCAGGGAGCTGTCTTCTTGGGCAAGTTCCGAGCGGAGGAGGTGGCCATCAAGAAAGTGAGAGAACAGAATGAGACGGATATCAAGCATTTGAGGAAGTTGAAGCACCCTAACATCATCGCTTTCAAGGGTGTTTGTACTCAGGCCCCATGTTACTGTATCATCATGGAATACTGTGCCCATGGACAACTCTATGAGGTTTTGCGAGCTGGCAGGAAAATCACACCTCGATTGCTAGTAGACTGGTCCACGGGAATTGCAAGTGGAATGAATTATTTGCACCTTCATAAAATTATTCATCGTGATCTCAAATCACCTAATGTTTTAGTGACTCACACAGATGCAGTAAAAATTTCAGATTTTGGTACATCTAAGGAACTCAGTGATAAGAGTACCAAGATGTCCTTCGCTGGCACTGTCGCCTGGATGGCACCAGAAGTGATACGGAATGAACCTGTCTCTGAAAAAGTTGATATATGGTCTTTTGGAGTGGTGCTTTGGGAGCTGCTCACAGGGGAGATTCCGTACAAAGATGTGGACTCTTCAGCCATTATTTGGGGGGTTGGAAGCAATAGCCTACACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAATCCTTATGAAGCAGACATGGCAGAGTAAACCTCGCAACCGACCTTCTTTTCGGCAGACGCTCATGCATTTGGACATCGCATCTGCAGATGTACTTGCCACCCCACAAGAAACCTATTTCAAGTCTCAGGCTGAATGGAGAGAAGAAGTGAAAAAGCACTTTGAGAAGATCAAGAGTGAAGGAACCTGTATCCACCGATTAGATGAAGAACTTATTCGAAGGCGCAGAGAAGAGCTCAGGCATGCTTTGGATATTCGTGAGCACTATGAGCGGAAACTTGAGCGGGCTAATAATTTGTACATGGAACTGAGTGCCATCATGCTGCAGCTAGAGATGCGGGAGAAGGAGCTCATCAAGCGTGAGCAGGCTGTGGAGAAGAAGTATCCTGGGACCTACAAACGACATCCTGTCCGTCCAATAATCCACCCCAATGCCATGGAGAAGCTCATGAAGAGGAAAGGCATGCCACACAGACCTGGGATGCAGGCCAAGCGGCCAGATCTGTTGAGATCTGAAGGTATCCCCAGTGTGGAAGTGGCTCCCACAGCATCCCCTTTATCCGGAAGTCCCAAACTGTCCTCCTCCAGCAGCAAGAGCCGATATCGGAGCAAACCACGCCACCGACGCGGGAACAGCCGAGGCAGCCACGGTGACTTTGCGGCCATCTTGAAAAACCAGCCAGCCCAGGAGGATTCGCCCCATCCCACTTCCCTCCACCAAGCTGAGCCCCAGTACCCATCTTCCCAGCACCATAATCTTCTGCAGCAGCAATACCAGCAACCCCCACCTGCCATGTCACAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATTGCCACCTGCGCCAACAACCTGAGGTACTTTGGTCCTGCAGCAGCCCTGCGGAGCCCACTCAGCAACCACTCTCAAAGACAGATGCCTGGCTCTAGCCCTGACCTCATCTCCACGGCCATGGCGGCAGATTGTTGGAGAAGTTCTGAGCCTGACAAGGGCCAGGCTGGCCCCTGGGGCTGTTGTCAGGCTGACTCCTATGACCCCTGCCTCCAGTGCAGGCCAGAACAGCATGGGTCCCTAGACGTCCCCTCGGCCAAGCCGGTAGGGAGGAGCCCCAGCCTTTTCAAGCCACCAGCACACAATCCCCTCTTGGAAAATGCCCAGGGTTCTGAGAAAATGGAAGAAAATGAATTCAGCGGTTATCGGTCTGCATCATCCCTTGGCGCCTCTCATCACATCACTCCCCCAGTGCTACCTCGCAAAACAAGGCCACTTCAGAAGAGTGGAGATGACTCCTCTGAAGAGGAAGAAGGGGAAGTAGATAGTGAAGTTGAATTTCCACGAAGACAGAGGCCCCATCGCTGTATCAGCAGCTGCCAGTCATATTCCACCTTTAGCTCTGAGAATTTCTCTGTGTCTGATGGCGAGGAAGGAAATACCAGTGACCACTCAAACAGCCCTGATGAGTTAGCAGATAAACTCGAAGATCACCTGGCAGAGAAGCTTGATGACCTGCTGTCCCAGACGCCGGAGATCCCCATTGAGATATCCTCACATTCGGACGGGCTCTCTGACAAGGAGTGTGCTGTGCGTCGCGTGAAAACACAGATGTCTCTGGGCAAGCTATGTGCGGAGGAACGTGGCTATGAGAATCCTATGCAGTTTGAAGAATCGGACTGTGACTCTTCAGATGGGGAGTGTTCTGATGCCACAGTCAGGACCAATAAACACTACAGCTCTGCTACCTGGTAATGAAAGAACACCCACCCTGAAGATCTCATGACTATACTGGCATTTCAAATTCACCACCCCCAGACTCTTCCCACTCTCCTCCTGCTTTTGTGTCTGGGAGGAGAGCTGCCCCATCTTTCTTACCCCTAGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAGAAAAATATCCAAATGAAATTAAGTCTCACTGAACATTTCAATCAAGAATGGCAGGGATCTATTTTATTGAATATTCTAGCTACTGTAACATTGATATTTATTTTTGTTTGACATTTTAACACTTTGTACTGTAAAGAGTGAACTATATATGATAGAGAAAAAGACAATAATTTCTTGCAAAAAAAAAAAAAAGACAGCAAAAGGAGGAAAGGAAAAAAGTGAAATTTGGGAGCAACATCCTTGGGAGTTTGTGGGACCAGGAGGTATTATTGCTACTTGAACAGGGGACCAGTTCTTTTGGCTGTAAGTGACTGAAGAAGAGCCAAAGCAAGACATACTGAGCATTTTAGAAAACAAAGAGCAGCAGAAGAAAAGCAATTCCAGGTAACTTGTAAACAGACCACACTAAATTCAGCCAGCTTGTCCAGATGGGTGATGCAAAGACCTAGAAAAGTTTGGTGACCAGCTACTTGTATCCAAGGTCTTTGAGGGCATGTATTCAAAACTGTGTTTGTGGAAGCTGATGTCATTTTTAAAGTTTTAAACAGCATTTGGTAGTGAGACTTACAGGTAGTGTCCAACCTTGTCCTTGACAAATATTCCACTTTTTAATGCTGTCAGTGTCATGACCTTGGCAAGTGTGTTACCTTGACCAGTGTGTTGATTTTTCAGACTTGAGTGTCATTTCCCTGTATCCTACTTCCTTCCCACCTGTTGACTATGTCTTTTAGGGAAAAACGGGGCAGGGGAGGGAGAGCCTGAGGAAGAGAGGAGGATAAGACAACAGTGTTGGAAAAGCAAATGTGCAATTTGTGAAAGGACATTCACAGAATGTCTCAGTTTAACTACGTGGAGAAGATGGCAAGCACCGCTCCCTGGGACCAGGTTGTTTGTCTTCTAGAGTTTTATTGACTTAGATGGAACAGTCTTTGAAGGCAGCTAGGAGGTGTATGAGTCTGCCCAATGTCCAGTCCCAGACCATACCCTATGTCAGACCATACCCTATGTTTGTATTAACTCATTCTAACCCCAGAAGCTTTCGTGAGTGGCTGCCACGGTCAGAAAAAAGGCAAAACAGGCAATTTGCAAAAGGCAGCCCCTCCCCCACCATAATAGCTTTCCTGTTAAATGCTACTTGTAAAATGTATTTGGCTCCATGCAAATTTGAATAATTGGATTTGGAAATTCATAGAAAGAACAACTGATGCCAAGCAGAGATTGGAAAGATTTTATATTGTCCAAGACCTGAGTCCTTTCTGTCTCCAGGATCATGGGCTCTGAGAAACAAACCAAGGTATTTCATGGTGCCTCAGCTTTAAGGAAATTTTAATCTAGAATTTGATATAAAAACAGATGTTGGCCTAGTTTCTGTCTCCAGGATTAGTCACTGCCAAACACCCTTTCTCGGCTCAAGACCTAGAGAGGATGGTTTGAACTCTTTGACGCTGCATCAGATTGGACATCAGGCAAGACTTATACACCAGGTATTAAACCATTTCCAATAGAGGTGAAAGCATCGCCCTCCTCCAAGTGTCACTGATTGCATCAGCCAAAAAGCAAAAGCAGGAGGGAGTTTAGAGCAGTTCCTTTTGCTTGTTTGATCCCTCCATTTGTTTACACTTTATGTTGAGACATTGATTTAAAATTTAGTGTCTATAATTTATAGCTCTTAGGTAGGATGAAGGAAAATGTTTAACTTATACAGAGAGCAGTATTGTTTCATTAAATTATTCCATTTTGTATGAATTCTGTAGCTGGACTACATGAAAGATCTTAAGTTATGGCATTATTATCATTGTTATTTTATTTTATAATAATTATTATCCTTCTCATTTTCTGTCGATCAGAATGTGTGGTTTATGGTGTAGCACAGTGATTGTGTTGATTGCTAACCATGAGTTATTATGGATTTTTATGAAGGAATGAAAATGGAACTGCCATGTGGGAGCTCCCTGGTATTCGTCTTAGCTGTATTCCCTCATTTTCTGTGTACAACAACAATCATCTGAGGATGCGGGTACTGCCCTGAGGCCCAGTGGTTAACGCTGTGATTTTGACTTGATCACAAAAGCTCCTAGGTGGGCAGATGACTGAGTGGTGGACAAAGTTCCAAAGCTGTACACTTTCTCAAGTTTCTTAAGAAATAAAATCATGCGATCCATTAGAAGCACAAGAGAATTATTTAATGCCCAGAGAGAAACAGGCCTACAGGGAACCTACCTGGGGCCTGTGGGATAGTTTCAAGAACTGGCAACATGGTTTGTAAGCTCCTTCCTGCTAAATCCCTTAAAACCAACCTTCTTTCCTCCTAGTTAGGAGACTAAAAAGAGGAAATAGATGGCATGACAAAAAAAAAAAAAATGCCTAGCTGTGGTGATGATTAGGAAAGTTCTAGCCTGAGGCCTAATCTGTCAGTCACAGAGCTGGAAAAGCACCTTTTAAAGCCCATGTTTTATCCTCTGACTTCAGACCACACTGTACTATGAATCTCTCTGGCTCATTACTTCTGAGAACAGAGAGGCTATAATTCTGTATCCTCTTTCTGTCCAACATAAAACACTGACCCTTTAGCTTATCCAGGCCTTGCCCACCTATAGTGGCCAAAGAAAAAGATGAAGGTGAACGTGTCTTATCCCTTTCAGTGATGATCTTTCTGGAAAATCCACTCCAATACCTCATCGTTTTGATACCTTTTGAATTCCCATCTGGACTGTCATGATAATGCCATATATCTAACTGGATTGACTGTTAAGAGCATGTTAGGGCCGCAGACAGTGTTGAATCTTCAAGTCATTCACTGTATGGTCAAGAGCTGAATAAAGTTCTACATTG EMBV3_10548 GGAGGATACTGAGCACCATTTCACCATATTCTGCACCCTTATCTGACTAACAGTCCCTCC Gene GeneID:281258|F11R:NM_174095:183_cdna Constitutive 1 NULL GeneID:281258 3 GENE F11R JAM1 F11 receptor EMBV3_22013 AACAAAGCTTATCTATAAGGATCTAGTGAGGATTCGGTTGGTGTGTGCTACCCTTCAACA Variant GeneID:617430|C2H11orf70:NM_001046598:26_cdna 622^688 3 EMBV3_35368 GeneID:617430 15 GENE C2H11orf70 C11orf70 MGC127886 chromosome 11 open reading frame 70 ortholog EMBV3_37761 CATTGTCCCTAATAGCATTTATGGGCTCACTGCTGCTCTCCTCACCACAGGACTGGACCT Gene GeneID:100137758|LOC100137758:XM_002693356:288_cdna Constitutive 0 NULL GeneID:100137758 15 GENE LOC100137758 NULL similar to olfactory receptor Olfr607 EMBV3_30000 ACCTAGGAGCCAGGCGTCCTTGCAGAGGGCTTAGGGGCTGGGGGTGTGCACACTGCCAAA Gene BVV0102_053529 - 0 NULL GK000006.2:26224689-26345280 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175004 TCONS_00048812 TCONS_00006212 3 XLOC_104787 XLOC_028943 XLOC_001775 NonCoding TCONS_00048812 XLOC_028943 NonCoding NonCoding - 13:49018692-49019337 - TSS35988 645 1 TCONS_00048812_1 97 1 0 1.05470556467492e-05 0 7.41276963642213e-05 0 0 5.77690039552415e-05 0 4.58505571066637e-06 0.000272178487746958 0 8.87282004216321e-07 8.31556057528012e-06 5.93134807224284e-06 3.16030536889996e-05 3.9436128036391e-05 2.04741304973556e-05 1.28699791788864e-05 2.91754561426782e-05 0 0.000111866731292832 1.68651177652844e-05 5.75244607176062e-06 7.11165666945104e-06 0.000356952247466072 0 0.000255784860341289 3.91475823134471e-05 0 1.75618616030724e-05 5.20440340619046e-05 XR_236255.1 LOC101905928 PREDICTED: Bos taurus uncharacterized LOC101905928 (LOC101905928), 6e-08 62.6 72.52 0.178294573643411 0 noncoding 0 0 0 0 0.0425495311291958 0.704658756308425 -0.00959511421808806 0.842321262614134 CCTGGGCGTTTGGGCTCCCTAGCAGAGCCGCAGCGCAGGGGAACCAGCCCATGATCAGTGAGCTCCGGGCAGTTACTTTGGTCCCAGGTTTGGAGCCCAATGCCCGGAACGCGGGAGAGAAGAGGCTGGCTGCCGGCGGGTGCTTGCAAGGCTGTACTGGGAAGGACCGAGTGAGCTTCCACACCGGCGGAGCTCCAGCTCTGCGCCCAGGCGCGATAGCACAGAGCCCCGGCCGAGAGGCTGCTCTGTGCCGAGCGAGCCTCCCCAAGGCCTGCCCAGCTTCTGGCGTTCGCGCCCGGGAAGGAGCAGGCTGCGGGAGTGTGGGAGCCGTGAGTGGTGCCTGACTGCTGCCTCAGCTCAGCTCTCGCCTTCCCTTCGGACCTAGGAGCCAGGCGTCCTTGCAGAGGGCTTAGGGGCTGGGGGTGTGCACACTGCCAAAGCCTCCCTCGGGGAGAGCTCTTTCCGAGGGAAAGGAAGCGCCCCAGGCTGCATTCCCAAGCTGGTGCTTCCCCGCCCAGACTAAGCGCCGCACGGAGGGAATCAGGGTCCCGGTGCCCCTGGCTTGGGGAGGCAGCTCCACAGCCAGAGTGTTGCTCCGTTTGTGCCCAGAAAGCGCCTGCCAGACCGGGCCTTCCCTGGAGCTGT TCONS_00045373 . 5' 339981 TCONS_00045373 . 5' 339981 EMBV3_08869 GATGGACTTTTGGTGATGAGAAAGATTGAGACCCTCCACCTCTGCCACTGGAGGCCTTCC Variant GeneID:513428|PPIH:NM_001075618:155_cdna 472^561 1 EMBV3_34090 GeneID:513428 3 GENE PPIH MGC142309 peptidylprolyl isomerase H (cyclophilin H) EMBV3_25209 AGCTAATGCAGAGATGCTAGGCTGGCTACTTAATACTGTACTGTGGATCTGAGAGATGGG Gene GeneID:618192|HSD17B13:NM_001046616:37_cdna UTR3_Alt 2 NULL GeneID:618192 6 GENE HSD17B13 MGC137280 hydroxysteroid (17-beta) dehydrogenase 13 EMBV3_42358 GTGTCCGTGGCGCAGTTGGATCAGTCGGCTTTAAATTACTCAGGTAATACAGTGCCAGCA Gene GeneID:100300544|LOC100300544:XM_002693519:78_cdna Constitutive 0 NULL GeneID:100300544 15 GENE LOC100300544 NULL hypothetical protein LOC100300544 EMBV3_11041 AAGCAGTAAATACGGTAACGGGGTAAGGGTAGGTGGCGGTACTTACGGTAACCGGGGCCG Gene GeneID:100296081|LOC100296081:XM_002697803:415_cdna Constitutive 0 NULL GeneID:100296081 24 GENE LOC100296081 NULL hypothetical protein LOC100296081 EMBV3_05977 GGAATATCGGGGCGAGGCGGCTTTGCACACAGCGGGCACACCCAAGGTGATGTGGTGCCT Gene GeneID:100300349|LOC100300349:XM_002688890:142_cdna Constitutive 0 NULL GeneID:100300349 7 GENE LOC100300349 NULL similar to scaffold attachment factor B2 EMBV3_31540 TGAGGGTGAGAGATCTTACTGAGTTGATGGAGCTGGTCTAATACTGGATTATGTTGATGG Gene BVV0101_035700 + 0 NULL GK000021.2:67283090-67372826 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121884 TCONS_00120058 TCONS_00121885 2 XLOC_073514 XLOC_073045 NonCoding TCONS_00120058 XLOC_073045 NonCoding NonCoding - 21:67311764-67313492 - TSS89745 1084 1 TCONS_00120058_1 114 0.716789667896679 2 0.373480023161552 0.00174109365867328 0.00020127596613884 4.80044551622395e-05 6.45628188121553e-10 9.96910582022643e-05 2.63986093499622e-05 1.40347926442978e-10 0.000703872437397331 4.3909226790989e-05 2.65694251453523e-05 0 0 5.05680245875835e-05 0.000337644149316357 8.60456130961699e-05 0 0 0 0.000144216656395374 0.000427869369816726 0.000242879999180656 0 0 0 0.000147580768661468 0.000324974218922632 0.00021174219794285 0 0 0 0 noncoding 0 0 0 0 -0.0507738854071657 0.719528702570906 0.0491190455322913 0.480578971532607 AATGAGGGTGAGAGATCTTACTGAGTTGATGGAGCTGGTCTAATACTGGATTATGTTGATGGTTGCACAATAAAGCAAATTTATTGAAAACTGTTGATATGCATACTTAAAATGGGTGAGTTTCAGTGAAGCGAAGATGCTGCTAAAGTTTATTGGGACTCTTTCTATGGCCCTGGCAGAAGGATCCCCCTTTGAGAACTGGGACCTCCAAAATCACAGGGCACTGAGTCGTAGGATGGACCAAAACTCCCCAGAAGAGCCACAGGGAGTGATTAGAAGCAGGGCCTTTCCTATTTCTGCCCTTGCTTCCTGGACTCATATGCTTTTCCATCTGGGGACAAAACACCATTATAATGGCCATCCATGTAGAGCATGTATGTCCTTGAGGACAGCCGTCCTCAAGCCAGCATCTCAGCTGTGTTGTCAAAAAGCCATGCTGCTAATTGCATCCTTGGTGTTTGGGTGGTTCAGTCTGCAGTAGCAGCGTGTTCACTTGGCCGTACCTCCTTTGCTGGGATTTTATGCAGGCTTCTGTGTTGATGGATCAAACACTCTCTAAATCTTCAGATGAGGTGAGTAGGGGGTTGGTTGAGGTTTGGGGGCCAGGAAAGGCAAATCCCAGGATGTGATGTTTAATTCTATGTATCAACTTGGACAGTGTTTTGGATGAGGTCAACACTCAATTGGCCAATTCCAGGTGAAGGAGATTATTCTCCACGGTATGGGTGGGACTCATCCAATCAGTTGAAGGTGTGAATTGAATGAAAAGATCAGCCTCCTGGAGCGAGAGGACATTCCCAGCAGACTGCCTTCAGGCTTCATCTGTCCGTCAGATCTCCGGGATCTCCAGGCTGCCAGCGCTAGGCCTGGAACTGCCCACCAGATGTCCTATGTCTTGAGCCTGCTCGTCTACACTGTGAATGTGGACGCTAGTCTCCATGATCACGAACCAGTCAAACCATGGGGTGCTGCTCAAGAATCAACAGGTGTCCTAATCTTTCCATACTTATGGATTCTCTTCCTTCCATACAAAGTGGAACACGTCATGCACCACTGGAAGCCCTGTCTGTGGCAGGATTCCCCC TCONS_00120057 s 3' 28676 TCONS_00120057 s 3' 28676 EMBV3_10636 CGAGCTCTCCAAGGAAGATGACGAATACGAGGCTTTCCGCAAGAGGATGATGCTGGCCTA Gene GeneID:533971|SF4:NM_001103278:56_cdna Constitutive 0 NULL GeneID:533971 7 GENE SF4 MGC143307 splicing factor 4 EMBV3_30723 CTCCAATGCTGTTATCTCTGACTGGCCTCCTCCCACACACACTCACCCTAGCAATAGCCA Gene GeneID:100336560|LOC100336560:XM_002700095:212_cdna Constitutive 0 NULL GeneID:100336560 X GENE LOC100336560 NULL Wiskott-Aldrich syndrome protein-like EMBV3_26517 TCTACCTTAGGGGAAGAAAGCGAGATGGTTTGGGGTGATGCTGACTCCACGGAATGCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32849 TTTGAAGCTATGGAAGAGCTGGACGGTGATGATGTGCGCGTGTCCTCTCGGGGACGCTAT Gene GeneID:785580|CPNE9:NM_001099195:250_cdna Constitutive 0 NULL GeneID:785580 22 GENE CPNE9 MGC157325 copine family member IX EMBV3_12978 CAGATGATGGCCCTAAACTGCATCTGCAAGGAGCTTCTAAACCTGTGCCACAGATACCCC Gene GeneID:768010|MGC134179:XM_002699761:20_cdna Constitutive 0 NULL GeneID:768010 X GENE MGC134179 NULL hypothetical protein MGC134179 EMBV3_29937 TTGTTCCCTTGAGAGATTAGTCAGCCACCTGGGGATAAGTAGGTCACTATGGAGTCTGGC Gene BVT0102_196850 + 0 NULL GK000016.2:73611051-73669632 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10935 CTCAGTACTGCTAGAGTAAACAATGGTCTGAAAAGATGAGTTTGAGAGATGAGGCTGGGG Gene BVV0102_231653 - 1 EMBV3_22137 GK000003.2:77975241-78243821 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178543 1 XLOC_108316 NonCoding TCONS_00178543 XLOC_108316 NonCoding NonCoding - 3:78103939-78104915 - TSS133302 976 2 TCONS_00178543_3 69 1 0 5.57610883598553e-05 1.02955361784686e-05 0.000436152547306451 0.000178675351168602 0.000136581813826368 0 0.000442158219528829 0 0 0.000210783194328888 0 9.15904446186407e-07 0 0 1.00536564205802e-05 0 0 0 0.000404099655005492 0.000132628900970706 3.11037450259289e-06 0 0 0 0.000220064232287906 3.60935945227986e-05 0.00141075789025696 0 0 0 0 noncoding GTTCAATTTAGGAAGGCAATTGAAGGAAGGGCAAATGATATAAGGCTCAGCACTGCTAGAGTAAACAATGGTCTGAAAAGATGAGTTTGAGAGATGAGGCTGGGGAGGGAGATAGAGGCTAAATGATGATAATTAGCCTTTATCCTAGAGTGACTGGAGCCAATACAGGGTTTTAAGTGAAAAGAGGATTGTGTCCAATTTTTAAGTTAGAAAGAAAGCCCTGGCAGGAAACTGCAAGGTGTGTCGGAGTGGAGGCAAGCCTAGAAGTAGAATGCTGTTGAAGATGCAGTTTCTTGTTCCAGTAGAGAGCATGAGGGTCTGAACTAGGAAACCATGTGGCCATCTTCTCCAGAGCTCCTCAACCACATGCAACATTATCCTCTTCTTAATCCACAGCGTATGTTTTTCCTCACTCATGGCCCCCACCACCCTGGGCCATGTGTTGTGATTATCTGTATATTTGTCTTCCTTCCTCTGCCAGGTTGAGAGCACTTTTCTTTCTCTGAATCCCTGGAGCTGGTTCACAGTTGGCACCGATGTGTTTTGAGGGTCATGGGGTTTGCAAAGAAGGGCATAGGGTGTACACAGCATGTGGCCCTGTTCATGAGCCAAACAAGACCTCCAGGCCTTCTGTTCACTCACTTCCCTTCTGTATTTGTCCTTAATCAAACTGTGCAAAGAAATCTTAACCGCCTTCTGTATTGTTTTGTGAATCAACAGAAGAGTCTTGTATGTTTACCAACCGGTGCTTTAAGGAAATAACACATAATCAGGGGAGGAAAAACCAGCTGGTGGTAGTTGGAGTTCGCCTGCCTGATTGTTTGTTTCCCCTCTCATAAAAAAAAAAAAAAAAACAAAAAACACTTGATCTTGGTTCAGCCTAGGACAATTTTCCAGAGGTGAACTTGCCAGTTCACAAAGACACTTGCGTGGAGGATTATTTTCTCCTTTGCTCCTCCATGACTTTCCCTTTGCC TCONS_00173754 TCONS_00173755 TCONS_00173756 . 5' 128700 TCONS_00173754 TCONS_00173755 TCONS_00173756 . 5' 128700 EMBV3_06961 GCAATCATCCAGAGTGTGAAAGTTAATGGGGCCTGGGTTTGGGGTTTAATATAGTATTGC Gene GeneID:615692|SAP18:NM_001035467:73_cdna Constitutive 2 NULL GeneID:615692 12 GENE SAP18 MGC127945 Sin3A-associated protein, 18kDa EMBV3_32449 TAGCATGGTAGCAGGTAACGCTGACTTAGGACTCAAGAAGTGGATATTAGTGGGCACCCC Gene GeneID:510973|NUMBL:NM_001076834:595_cdna UTR3_Alt 2 NULL GeneID:510973 18 GENE NUMBL MGC142865 numb homolog (Drosophila)-like EMBV3_13371 ACAGAGTATGTCACGGCCATTGCCAACCTGAAAAAATGCTCAACCTCCCCGCTTCTGGAA Gene GeneID:280846|LTF:NM_180998:65_cdna Constitutive 0 NULL GeneID:280846 22 GENE LTF Lf lactotransferrin EMBV3_08585 TGTCTTTTAAACTACCCACATACAATGGACCGAATCCAACCTCTGTACAAAGTGGAGAGC Gene GeneID:282707|CEP290:NM_174722:32_cdna UTR3_Alt 3 NULL GeneID:282707 5 GENE CEP290 KIAA0373 centrosomal protein 290kDa EMBV3_39527 CCGGAGTAACTGGGAAATCTACCGCAAACCCGTCATTATCATGTCTGTGGGTGGTGCCAT Gene GeneID:100140752|LOC100140752:XM_002695847:294_cdna Constitutive 0 NULL GeneID:100140752 19 GENE LOC100140752 NULL hypothetical protein LOC100140752 EMBV3_29383 TTGGCAAGTGTGGGAATTGGCTGTGTTGCTGCCTCTGTGTCTGCTCTTTCTGTCCACTCT Gene GeneID:522784|LOC522784:XM_002699301:259_cdna Constitutive 0 NULL GeneID:522784 29 GENE LOC522784 NULL similar to solute carrier family 22, member 10 EMBV3_09714 GATCAGTGTGTGCTTGAATGGCCTGTTTAGGGGCTTGTAGAGGACAGGGAGGGTTCACAT Gene GeneID:618886|LOC618886:XM_002697208:99_cdna Constitutive 1 NULL GeneID:618886 23 GENE LOC618886 NULL similar to cDNA sequence BC004004 EMBV3_07374 GAGGCTCTTGAGGCCTCTCATGTGACTTGGAAACTCCTGGACGAACTCCATTCTAACTTA Gene BVV0102_125996 + 0 NULL GK000021.2:21900084-21903846 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118796 1 XLOC_072734 Coding TCONS_00118796 XLOC_072734 Coding Coding ZNF710 21:21888236-21902070 = TSS89127 4687 1 TCONS_00118796_1 664 0.0245359505013868 4 0.661461721969204 0.00519176311685157 0.00497669056849601 0.00339992064593491 0.00114982811586112 0.00220023642689278 0.000673001490709873 0.00199449779926638 0.00171687486818944 0.00292407360648025 0.000144299348287828 6.64239065093132e-05 2.99555871655533e-05 0.000209112459714542 0.000107145352101332 7.19396231808164e-05 0.00232235234159017 0.000156935377799698 0.000206463027548385 0.00212969942703086 0.0041859003786717 0.00121495757991728 4.85931059698966e-05 0.000371893415495579 0.00147365628820118 0.00386644615008391 0.00266634377153839 0.00265334462915171 0.000122958668105905 9.01110042871447e-05 0.00122619998049052 XM_002696565.3 ZNF710 PREDICTED: Bos taurus zinc finger protein 710 (ZNF710), transcript 0.0 8453 100.00 0.999786643908684 XM_005254908.1 ZNF710 PREDICTED: Homo sapiens zinc finger protein 710 (ZNF710), 0.0 3258 79.48 0.778749733304886 TCONS_00118796_1 sp|Q8N1W2|ZN710_HUMAN ZN710_HUMAN Zinc finger protein 710; 0.0 1221 94.58 0.998493975903614 4 coding 0 0 0 0 1.26778287619234 0.0218267818317917 -0.0911741287300462 0.348638868650933 CAGCGATGCCCTCCTAGCCAGCCGCCACGGGATGGAGGGCTTCATGGACTCAGGGACACAGACTGATGCCGTGGTGGTGCTGTCTTTGGCTCAGGCCGCCGTGCTGGGCCTGGTCTCGGAAAATGAGCTCTTTGGAGCCACCATAAGCGCCGAAGCCTTCTACCCGGACCTGGGGCCGGAGCTGTCCGGGGCAGCCATAGGGGAGCCCCGGCCCCCGGGCCCCGACGTCTACCAGCTGGCCTGCCACGGGCGGGCCCTGGAGGAGCCGGCCGAGGAGGAGGTGCTGGAGGTGGAGGCGGCCTTCGAGAAGCACACCCGGCGGAAGACGCGGCCGCCTGTGCGCCTGGTGCCCAAGGTCAAGTTTGAGAAGGTGGAGGAGGAGGAGGAGGTCTACGAGGTGTCAGTGCCCGGCGGCGACGACAAGGATGCCGGCCCAGCAGAGGCCCCAGCCGAGGCGGCTGGCGGCGGCTGCGAGGCCCTGGTGCAGAGCAGCGCGGTCAAGATGATCGACCTCAGCGTCTTCAGCCGCAAGCCCCGGACGCTGCGACACCTTCCCCGCGCCCCGCGGCCGGAGCTGGACGTAGCCCCCTTCGACCCCCACTTCCCCGACCCGGCCCGGGACGCCTTCGCCGAGCCCAGCATGGCGCTACCCAGGCCGGAGGCCCTGCCCGTGGAGTGCGGCTTCGAGCCGCCGCACCTGCCCCCGCTGAGCGACCCCGAGCCCCCCACCATGGAGTCCCCAGAGCCCGTGAAGCCAGAGCAGGGCTTCGTGTGGCAGGAGGTGGGCGAGTTCGAAGCGGACGCAGCCGGCTCGACGGTGGAGCGCCACAAGAAGGCCCAGCTGGACCGGCTGGACATCAACGTGCAGATCGACGACTCGTACCTGGTGGAGGCCGGCGACCGGCAGAAGCGCTGGCAGTGTCGCATGTGCGAGAAGTCCTACACGTCCAAGTACAACCTGGTGACGCACATCCTGGGCCACAACGGCATCAAGCCGCATTCCTGCCCGCACTGCAGCAAGCTCTTCAAGCAGCCCAGCCACCTGCAGACGCATCTGCTGACGCACCAGGGCACCCGGCCACACAAGTGCCAGGTGTGCCAGAAGGCCTTCACGCAGACCAGCCACCTCAAGCGCCACATGCTGCTGCACTCGGAGGTCAAGCCCTACAGCTGCCACTTCTGCGGCCGCGGCTTCGCCTACCCCAGCGAGCTCAAGGCCCACGAGGTGAAGCACGAGAGCGGCCGCTGCCATGTGTGCGTCGAGTGCGGCCTGGACTTCTCCACGCTGACGCAGCTGAAGCGCCACCTGGCCTCCCACCAGGGCCCCACCCTCTACCAGTGCCTGGAGTGCGACAAGTCCTTCCACTACCGCAGCCAGCTGCAGAATCACATGCTCAAGCACCAGAACGTGCGGCCCTTCGTGTGCACCGAGTGCGGCATGGAATTCAGCCAGATCCACCACCTCAAGCAGCATTCGCTCACCCATAAGGGCGTGAAGGAGTTCAAGTGCGAGGTGTGTGGCCGAGAGTTCACCCTGCAGGCTAACATGAAGCGGCACATGCTGATCCACACCAGCGTCCGGCCCTACCAGTGTCACATCTGTTTCAAGACCTTCGTGCAGAAGCAGACCCTCAAGACCCACATGATCGTCCACTCGCCCGTGAAGCCGTTCAAATGCAAGGTGTGCGGGAAGTCCTTCAACCGCATGTACAACCTGCTGGGCCACATGCACCTTCACGCGGGTAGCAAACCCTTCAAGTGCCCCTACTGCTCCAGCAAGTTCAACCTCAAGGGCAACCTGAGCCGGCACATGAAGGTCAAGCACGGCGTCATGGACATCGGCCTGGACAGCCAAGACCCCATGATGGAGCTGACGGGCACAGACCCCTCTGAGCTCGACAGCCAGCAGGAAATGGAGGACTTCGAGGAGAACGCCTACGCCTACGCGGGTGTGGATGGCAGCGCCGAGGCCAGCGTCCTCTCCGAACAGGCCATGAAAGAGATGGCCTACTACAACGTGCTATAGCACAGGCCCGGCCGCCCGGAACGGGCGAGGAGGGCGTGGGGCGTGCCGGCTGCCTCCCTGCAGCTGAGGAACGAGCTGCTGCCCCACTGTCCTGAGCCCTGTCCTCCCACTTGGTCATTTGCACCACTAGGGACTTGGAGACCAAATGGAGACTGTACTACTGGCCTCAGCTGTGAACCCAGCACAGGCCCCAAGCATGGTGGGGAAGGAAGGATGACCCGGGAAGCCCAGGTCCCCATCTCCTGGGCCTGCTGCTGCAGGAAAAATGTGGATGGGGGCTGTTTGGGGACAGGCCACTAGGGCAGTGGTTCTGTCTCTTCAGGCCCAGCAGAGCGGGGGCAACCAGTGTTGGGGGGCTGCCCTCATGGCTCCTCAGGGGCCCTGTCACTGGAGAAGAGATCTCTTGAGCCATGGCGTGTTTCTCCTCTGGACCATCTCCTGTCTCTAGGGATGGTGGAGCTCTTGTGCTGGTTGGTCAGCCCTGCTCCCCACCGTCACCCACTCCCATCAGCCCATAGACTGGGAAAAGCCCAGGCCGAGTCCCGTTCCCCACCCAGTCCACAGACAGCCAGGCAGGGCCCTCTGCCTTCTACCTCCTGGTGCCCTCCACACTCTCTGCCAGCCAGGCATGCATGTGGCCCATAGGAAAGCAGGGTGCAGCCCCAACCCTGGCTACCATCCTCTCCAGCCAGCCCCCAGAAAGCCCCCATCTCACAGCCCTGTTTGGTTGGAAATGGGTGTCCCAAAAGTGGATTCCAACAAAATGTTATCCAGGGCAGCACGCCAGGGTCCCCTGACAAAGCCAGGACATGCAGTGCATGAGGCACTTGCTAACAAAGGTGGCGGCCCCCCAAGTGAGGGGAACAGGGAGGGGGTCACTGGGGACCAAGAGGGGCTGTCCTCAAGGAGGCCAAGGATGGCTTGTGGGGGGGAGGGGGGACTGGACTTTTTCTTATTTAAGGTCTAATAAGTATGCATTTTGAGGATGGGGACAGCCAAGAGTCACCAGAGTCCTAGGAAGAGCAACATATTTTAAAAAGGAAGACCATAGAGGAAAAAAACAAAAAAACCCTTTTTTTTTTTGAGCAAAGGGGGGTATTTTGAAGGTAATTTATTTTTTTTTCTTTCCAAATCTGCGTCACCTATTCTCTTTTCTGATGGACATCATTTTCTTTTTCCCCGCGGAAGCTTTCTTGTGTGCTGTGCATGCTTTGTGGCTCCCCAACCAACCAAGAGCAGCCCAGGGACTCGGGGTGGGGATGGAGGGGGTACTTGCTGGTCTGGCCCTGGAGGGCGCGTGCAGCTGTGGGCAGGAAGCCTCAGGAGGCGAGGGCGAGAGGCAGGAAGGGGCAGAGCCTGGCAGGCCCTCCACCCCTGCCCGGCCCCTCCCGCCAGTGACTCGCTCCATGCCGTTCAGAGCAGCGGCCAGAGCTCCCATGCCTGCCCGCTCTCAGCCTCTCTGTCCCCAGCTCCTGCCTCGGAGCTGAAAAAGACTGCAGGGCCCCCGGGACGGTGAAAGAGCACACTGAGGAATGCCAGGGCACCCAGACTCCCACCCACTCGCACCCTGAGGACTGTGAGATGGGGTGGGAGTGGGGGCAGGCAGGGCCATCCTCAAAGGCACAGGAGGTGAGGCCACGGGCCCCAGGGAGCAGCTGGGAGGAGGTGCCCCCAGAGCTGTGTCCTTCCTGAAGGACCAGTGGCAACCCACTCCAGTATCCTTGCCTGGAGAATCCCCATGCACAGAGGAGCCCGGCGGGCCACAGTCCATGGGGTGGCAAAGAGTTGGACACAACTGAGTGACTAACACACACACACACACACACACACAAGCCAGGCCTCAGGGTGGCTGAGATCAGGATGGGGGGAGGGGAGGACACAGAAGCCTCAGGATCAGGCAGCCAGGTGCCCCTTCCTTCTTCACTAGAGTTCATGCTGAGCAGCAAATGGGAGGACTGGGGGTCCTCACTCACCCCAAGTGTGGCTCTTTAGACCCCGAGGCCCCCAGCCTCCCAGGTGCCCGCCATGACGACCCTCAGGTGGCAGTGACCCCGTCACTGTAGATGACATTTTCTCCTGCTGAGCAGAAGCGTTGTCCCCTGCAAACTACCTCTTTCCACCACGTCTTCTCCCCCCACCCCAGGTACCAAAAACAAAAACCCATATCTCCTCCTCCTCCTCTTTCCGGCCACCCGGTGGCCTTGGTCTTGGAAGCCCACAGGACAAGGTCCAGCCCCCAGGCTGGTGCTCTCCTGTCTTCCCCCAGCCCCGCCATCAGCACCAGCCCTCTGAGAGGTTCCATACTTGAACAACCCCCCACCCCCACCCCTGCCCCGTACCTTGGACCTGGGCAAGGCTGAGAGAAGGAAGCAGCAGCACAACTCACAATCTGAGCTGGGGGGCGAGGGCGGCTGTCTCAGCAAGGCTCCAGTCCTCACCCTGCCCCGCCCTGCCCCAACCTGTTCAGAAGAGGCTCTTGAGGCCTCTCATGTGACTTGGAAACTCCTGGACGAACTCCATTCTAACTTATTTTGACATGTATACGAACCAACTGTTTTAGAAATTCCACTCGTGCAAAGCCCTACTGTGTTTTTATGTTCCTGTTTCAAAGAGAAGTTTACTTAGCAATAATTATAAATAAATGAATATTCTTTAGTGAGG EMBV3_19815 TTTTCACCCCTCTCCTCCGGCCACCCAGCCCGCTGCACTGAAAGGAGACTTTATTCTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27461 AGGCAGGCCTGCAGCGGGAACAGAGGAAGGCCGACACCCACAAGAAGATGACTGAGTTCT Gene GeneID:510866|ZGPAT:NM_001024514:982_cdna Constitutive 0 NULL GeneID:510866 13 GENE ZGPAT MGC140277 zinc finger, CCCH-type with G patch domain EMBV3_36569 CAAATGGATAGCAGCCTCCTGCCTCCCACCCCTCATGAAAATAGCCGTGCAGACAAGTTT Gene GeneID:784871|ZBTB33:NM_001098157:25_cdna Constitutive 1 NULL GeneID:784871 X GENE ZBTB33 MGC155143 zinc finger and BTB domain containing 33 EMBV3_26074 CAGCGTGACTGGGAGGCATTAGTCAGCGGTGGAGGTTTATGAAAGGAGGAATTGTCCGGA Gene BVV0102_053915 + 0 NULL GK000017.2:71353955-71413854 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00078131 1 XLOC_047228 NonCoding TCONS_00078131 XLOC_047228 NonCoding NonCoding - 17:71385607-71391139 - TSS58209 5405 4 TCONS_00078131_6 128 0.294357076780759 2 0.0231422889170132 0.00344023398108903 0.00221697746289653 0.00384727915188312 0.00151487369237561 0.00222790394958653 0.000778942544005495 0.00139076845752761 0.00202264531658267 0.00161233221314923 0.000352453010171298 0.000124941759220845 8.46786404253815e-05 0.000515993770979523 0.00082243750425707 0.000373978695591841 0 0.00135459934314565 9.28430753633401e-06 0.00233237800905302 0.00281413414157734 0.00197891063212632 0 0 0 0.00302134829113005 0.00164046628799365 0.00187920015681259 1.59937981592037e-05 4.76029645307526e-05 0.000226919747011599 XR_232310.1 LOC101910077 PREDICTED: Bos taurus uncharacterized LOC101910077 (LOC101910077), 3e-142 511 86.21 0.0791859389454209 0 noncoding 0 0 0 0 -0.134081737977199 0.325136885941632 -0.00282558306523244 0.97201016812939 CTGGAGCCGGCTGGAGCCTGAATCCCAGCTCCGCCGCCTCTGAACTGTGTGTGATGTTGAGGCACTTACAATTGAACTTCCAGGCCTAACTGAAGCCCTGAGATAACATTAGTGCCTCATTGGTGCTACTGATACAGGTTTATATGAGTTAAAGATTGCAATGAGTATGACTGCAATTATTATTATTATTATTGCTGGTTATGACTCAAAGTGTTCCTGCTCCCAATTAATTATCCTTGTTCTGTAACATCAGGGGCCCAGGCCTCGACAGCTGAATTGGAAAGGCCTGGGAAGGGAGCCAGAAGCCTGGGGCTCCACCTTAGCAGCCCAGCCCGGCCGTGTGACCATCTTGCCTGCTAGCCGGATGAGTAAGACCGGCAGCCATCAGATTTCCTAATTATCTACTTCACAGGGCTGTGGGGGATGATCAGACAGAGACATGAATGAGAACTAGCCTCTCTGCAAATATTTGTTGAACACCTACTGTGTTCCAGGGCTTGAGGAGGGCCAGTTAGCGAGAGAGACCACAGGAGCCCTGCCCCAGGGAAGCCAGAAATTAAGGGATTACTATGAAGTGAGCAAATGTGCTGTAAACCCGCCGGCCCCAGCCTTTTTGGCACCAGGGACCGGTTTCGTGGAAGACAATTTGCACTCGGGGTGGGGGGGAGGTTTCGGGATGATTCAGGTACATTACATGTACCGCGCACTTTATTCCTGTTGTCATGACCTCAGCCCCACCCCAGTTCATCCTGGAGGCTGGGGACCCCTGCTACAAACCATCACTCTGCTCGTGGCCCATCTCTGTCTACAGAACAACTTAACGGCTCAGGGGGGAAATACCTCCTGCTTTGCCTCCATCTAGTGATGCGATCTGGGCACATCCCTCAACTCTGAAAGCCTCTGAGTCTTCATTTATGAACTGGGCTTTGAGGAGGGCATGAACAACCCCTTCCTCACCACGCTGGTGGAAGGATGAAGTGAGTTCATGTGTGTGAGGGTTTAAGCCCCACAGGAGACACCGCTGAGCTCCTGCCAGATGGTGGTTATCGACCTTGCCACCTGGCGCTGGGCTGGCACCTGGGGTTAGTGAGACGCGTGTGTCCTTCAAAGGGAGAAAGACCAGGAGTGTGGCGGGCACCCTTCCCATCACACACTGACTTTTTGTTAAAGTCACATCTATGATTATACAGGAACAGAAGTTAAGTCTGAAATATTCCAGAGGCTGGGGTGAGGACATTTACCTTTTACTTTAAAAACATTAAAAAAATTTTTTTAATTGATTTACTTATTTGGCTGAGCCAGGTCTTAGTCTCGGCACTCAGGATCTTCAGTCTTCGTGGCAGCAGGCAGATTCCTAGTTGCAGCGGGTGGGATCTAGTTCCCCGACGAGGGATCGAACCCAGGCCCCCTGCATTGGGAGCTCGGAATCTTAGCCAACAGGGAGGTCTCTACTTTTCCTACTTTTCTGTATCGTTTGAATAATAGATCATCTTTGCTTTTGTGATAAAATATACAAAATATAAACTTTTACGGTTTTAGACATTTTGAAGTGTACGGTCTCAGTACATCAGCTTTGCTTTGCCACCATCAACACGGTCCATCTCCAGAACACTTTCCACCTTGCCGAACTCAAACTCTGCACCTTTAAAGCACAAAGCCTGCTGCCTTCTCCCCTTGACCTGTCAACCTCTACTCTAACTTCTGCCCTGAAGATTTTGACTATTCTAGGAACCTCACATGCACGGACTCATACAGAATTTGTCCTTTTGCAGCCGGCTTATTCACTTAGCATAGTGTCCTCAAGGTTCATCCATGCTGTAGCGTAGGTCAGTATTTCATCCCCTTTTAAGGCGGAATAACAGTCAATAGATTACTGTTGCAAATTGGAAAAATAAAGATTGACGCAAAACAACAATAAGAAAAAGAATGACTGTATGAAAGACTGAAGAAGGGATGGGAGGTGAATATGCTGGGGGCCTCAGACGGAGGGGGCAGCAGGGTGATAAACTGGTGAATCAGCCCGGGGCGTCCTTTCTCCCAGGAGGAGGGAGTCGGGCCCCGCTGTCCCCTGGCCGAGAGGACAATGAAGACACTCAGCCCGCCAGCCAAGGACTGTGACTCACAGGCCGTGAGGCCGGACAGGGCCCCCGAGCGTGGCCCCCAGATGCCTGGGGCCATTCAACCTGGGCAGTGAGCAGCTCGGAGTTCCCGGTCCCCTTCTGATACCGGCCCTGCTCCCGCTCTCTGGGACAGCCCAGTTGGCCTGGTGAGTAAGGAGGCTCCGGACAATTCCTCCTTTCATAAACCTCCACCGCTGACTAATGCCTCCCAGTCACGCTGGGCCCTTCCACTCCAAAGCCAGTCCCTGCCCCAGAGCCGGCCCTGTGGGGTTTGGAGGGAGCCTCCCTCATCCCCACTGGTGCTCCCTCATGCCCTGTCCTGCCAGCCTCTGGGCCCCGCCTCCCCCAGTCAGCCTTTTCTCCCCTGGGCCACTTCCCCTGCCCCCAAGCCCTCGCCCCTGGGGCCCAGGTTGGTCCCACCCTGATCAAACCTTTGTATACCCTCCCCCTGTCCATCCCTGGCCTTTCCTGCTTAAAAGGCTGGGGTCAGCAGCAGATACTCCAGTGGGGGGGTTTCAGGCACCCAGGCAAGCCAGGGGGGACTACTTCTGAGCACGGGAAGGGTGTCTTGAGATGCCTCGAGCTCCTTTGGGGCACGTGGAGGGGTGCCACAGAAAGAGATGGGTTTGAACCAGAGTTCAAATTCTGACTCTGCCCCTCACTAGCTGGGTGACCATGGGCAGGTAACTTAACCGCTCTGAACCTGGATTTCCACATCTGTTAAAAAAAAAAAATAGGGAGGGGGAGTTCCCTGGTGGTCAGTGGTTAGTGCTTTCACTGCCAAGGGCCCGGGGTTTGACCCCTGGTAGGGGAACTAAGGGGCTTCCCAGGTGGCACTAGTGGTAAAGAATCCACCTGTCAATGCAGCAGACGCAAGAGATGGGAGTTCCATCCCTGAGTGGGAAGAGTCCCTGGAGGAGGGCATAGCAACTCACTCCAGTATTCTTGCCTGGAGAATCCCATGGATGGAGGAGCCTGGCGGGCAATGATCCATAGGGTCGCAGAGTCAACCAACTGAAGCGACTTAGCATGTACACCGGGGAACTAAGATCCCATAAGCCACGCAGTGTCAGTCAGTCCAGTCGCTCCTCCGTGGCTGACTCTTTGGGACTCCAAGGACTGCAGCACACCTCGCTGCCCATCACCAACTCCAGGAGCTTACTCAAACTTATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATTCTCTGTCGTCCCCTTCTCCTCCCGCCTTCAATTTTTCCCAGCATCAGGGTCTTTCCCAAGGAGTCAGTTCATCGCATCAAGCGGCCAAAGTACTGGAGTTTCAGCTTCAGCATCATTTCCTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCTAACACCACAGTTCAAAAGCATCAATTCTTCGGCGCTCAGCTTTCTTTATAGTCCAACTTTCATATCCGTACATGACTACTGGAAGTGTGGCTGGAAATAAAAAAAGGACTGGAGGTGGGAATATTCCTCCCTTCCAGAATGGATGTGGAGCACCTTCCAGAGAGAGTCTCGACTTGGCTTGGGTGAAGGTGACTGGCCAGGAAATGGGGTTGGGACTCCTTGGGGAGCACCTGCCTTCCAAGGACAGACCTTGGCCAAGGAGCACACAGCTGGTAAGAGCCGAGCACAGTCTCTCTGATGTCTTGGCCCCCAAGGTGGCTTGAGTCCCAGCTGAGAAACGGCCTTCTATGCTCAAGGTTGGCAGGAGGGTGAATTCTTTTATGACACCATGTGAGGGCAAGGAGCTGTACCCCTGGAGTGGAGCCTGGCATGGGCACTCCCAGACATCAGATGACAAGCAAAACCATCCTGGCTCTGTTCTGGAAGAGCATCTCCTTTCTTTTTCGAGAGGCAGTGGGGGTGGGGGGATGAGAAAGGACCACAGCCAGCTTTTCTTACTAATGAGGCCTAAACCAGGCCAGCGTGGGAACAACTTGGCGGGATCCGAGAGGCAGCTTGGAGAACTGGGAAAAGCTCTGGCCTGGGAAGGGAGAGCTGCAATCCCAGCTCCCCACCCCGCACCCCCCACCCCCCACGCCGTGTGGCCTTGAGTGAGTCACGGCCTCTCAAGTGACACGGCTCTTATCTCCGAAAGAAGGAGGTGAGATGTGAGGTCTCTCAGACCCTTTCCAGCTCTGAGATTCTCTAGCCTTGCAGCCATCTCTTTAAAGATGAGAAGCAGAGATGCTGAGCTGAAACAGATGTGGAGGATAAAGCCAAGATAATCAGCCCAGTGGTTTCTCTCTCTCTAGTGCCCTGCGTCAGCAAGGGCCTGGGTGAATTCTGGCATTTCTTCCTTGCGATAGGTAATCGAGGCAACATCTGAGGGCCCAAACTTCCGGAGGAGAGGCTGATCAGTCAGTTTTTTGCCCTCAACCCTTCGTCTCTCCTAACCAGCCTGTGTGTGTGATGTGCCTTTCTGAGTCCACCAGCCTGTGTGTGTGACATGGACATTCTGGGTCCAGTAGGGCTCCCGGGCTGACTTCCGGCATGGACGGTTTCCTGAGCATGATTCCTTTGCTGACAGCCCTTCTTCCTCCTGTCCTTCCTACAGTCAGCTGGAGTGTGGGGACGCCCATCCCCTCAAGAAGTATTCTTTATGTGTCTCACCAGTGCCTGGCTTCGAAACCAAAGGGATCTGGGCCACATGCGTTAGATGGAATTCCCATGAGTCTCCAGAGTGTGAGATACGACCAGGCTTCCTGGCCCCTGAGGGGCTCACCAGGCAGGCAGAGAGTTCAGAAGGTGACCCAGGATCCACCCGGCAAAGTGACAGTCGGGCCACAAGGGCTCTGGGTGGCTGGCAGGAGTTAAGGCCTCAGACACGTGACAAATTTAGCCAGCCCGGCGCAGCCCCAAAGGGTTAGATTTCATTTTAAAGGAACCGCCTGCCCATTTCCATCCTGCACCTGGTCTGTCTCCTTCCTCACCTGATCCCATTCTGTAATTACACGCTCACACGTTTCTTCTCTCAACCTGCCTCTAGAAAGCAAACTGGAGAGGGAAGGGCTGCGGCCGCCGTCTCCACCACCTTAACGCGCGCGCCGAGGCCTGTGAGCAGTGGCTTCGTGCCCTTCGCCGGAGCCCGGGGCGCGGAGCATCCGGGCCTGGAACGCGGACGTGCGTGGGAGGGACGTGAACTGTGGCTGCAGCCCTGCGGAAAAGAATCGGTCTTTGTCCTCATGTTCGCGTGCACCTGTCGTCCCAAGCCC TCONS_00078135 s 3' 26829 TCONS_00078135 s 3' 21448 EMBV3_43668 CACCCGGACTGTTCCCACTGACATGAATGACCAGAACCTAGAGGAGCCATCCAGATACAT Gene GeneID:504346|ALG9:XM_002692989:150_cdna Constitutive 0 NULL GeneID:504346 15 GENE ALG9 NULL asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae) EMBV3_04782 CCCATATAAGGAAACAGAGCTCAAAATCACACAAATCTGATCTGTGTCCTAAGAGTTGTG Gene BVV0102_211548 + 0 NULL GK000018.2:35587975-35600675 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086110 1 XLOC_052043 Coding TCONS_00086110 XLOC_052043 Coding Coding DDX28 18:35597792-35603499 o TSS64136 5707 1 TCONS_00086110_4 545 0.0502891186262485 1 0 0.000231929862658063 0.00012276408305274 0.000265991545061821 0.000242296060455529 9.90697824258208e-05 4.44214119023322e-05 0.000175959710308396 0.000154326198819536 4.60186482223527e-05 0.000117321736852166 6.38343608853199e-06 4.62471752071431e-05 5.0276522134727e-05 0.000138252249275474 2.00534552894608e-05 0.000186817546985399 2.20879872316346e-05 1.93140846995789e-05 0.00016262701631567 0.000517584492407124 0.000217938007173916 2.62695250876492e-05 9.00353670462245e-05 2.12096072685301e-05 0.000494849053868656 0.000337089117881624 0.000126624990273816 9.53217778805068e-05 1.85469228468907e-05 1.22217522840145e-05 NM_001105422.2 DDX28 Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 (DDX28), mRNA. 0.0 3303 99.95 0.321184510250569 NM_018380.3 DDX28 Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 (DDX28), 0.0 2201 79.74 0.427545120028036 TCONS_00086110_4 sp|Q9NUL7|DDX28_HUMAN DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28; 0.0 891 85.19 0.988990825688073 2 coding 0 0 0 0 -1.21623255239419 0.00719294272211808 0.00864344359839268 0.87775077574797 TTCCATACTTGCACAGCAGGCAGCAGCACAGGCTGTGCAGCAGTGGCCAAAAAAACCCAAAAACCTCTTTCTTCAAATGTTAAGACTCTTCCAAGTAGTTAACCCACATTTACCTTATCTCCTACCCCAGGCACTAGAGATTACAAAAATGGTCTGATGCCCATTTTCTGGATCCGTTCAGGAAGTACCAATAGTGTAAGGTTTTTTTCGCAACCTGAACTGAATTTAGGTAAAATATTCTGCCTTACCATGGCTTTGTGACCCTCCTCACTACTATTCAAGTAATTTAGGTATCTAACCTGAAAGCCGGTGGAGCTAGGCGAGCTTCAGGATGAGAAGTTGGAAAGAGTGACAAGAGAAGGAAGAATGAACCTCAGCTGAAAAGCAAGCGGAAAAGGTCCGAAGAGATGAGTTCTCTTGAGTGAAGAGATGATATGCTTAAGTCCATCGGCTCGCCCTCTGGGTCCTCAGCTCTCTGGGCGGTGGGGGAACGCTGAGCCCAGATCTACTCCTGGTCTCGGCCCCCAGGCCTGACCATTCACTCAGATTCTCAATAAATATTTATATTAGAAGACCTTACAAGGGGAGCACATCTGTGAAAACACCGCCGCACCCTCACAGTTTAAACGGGGCGATCAGAACTGGACATGCCATCACAGGAGCTGTGAGGGCGACAAAGGAGAATTGTAGGGATCCGACATCGGATCGCGAGAAGCCCTCAGCCCTCCTGATTCCTAATGCCAGGGCCCCATCGCCGCCTGTCGCCGGACCCCGGTCCTGCCTTCATCGTGCACCCTTCCCCAAGGTTGGCCGGGGCCTGGACGTCACCATCCGGTTTGGACCTACAGACCTCGCCGCTGCTGAACTCTACAGATCCTCCCTCCTTCCACACAGTTCTCCAATTCCTTAAGTCTTACTGAGCCGCGCCGGCCACCGTCCGGGAGGCCTTGGCGCGCGCATGACGTCACTGTTGTGCGCCTTTTCCGCACCACGGGGACTATGGCTCTAGCACGGCAGCTACGGCTGTTGTCGCTCGCGACTCGGTTGCTTCTGGCGCCTCAACGGGACCTGACAAGCCGCGGTCCCGACGAGCCCCTGCCCGTGGTGCGCATCCCGCGGGGTCTACAGAGGCGGCAGGAACAGCGGCAGAGCGGGCAGCGGAGTCCCCTGCGGCCGGTGTTGGTGCGACCTGGCCCGCTGCTGATCTCGGCGCGGCGGCCGGAGTTGAACCAGCCCGCACGCCAAACACTGGGCCGTTGGGAGGCTGCGCCACTCGTTTCGCGAGGCTGGAAGCATCGGCGCGCTCGCCAGGACTATTTCTCCATTGAGCGCGCTCAGCATGAGGCCCCAGCACTGCGGAACCTCTCGTCCAAGGGCAGCTTCGCCGATCTGGGTCTGGAGCCCCGTGTGCTGAGCGCACTCCAAGAAGCTGCTCCCGAAGTCGTTCGGCCCACAACCGTGCAGTCGAGTACCATTCCCCCATTGCTTCGCGGCCGCCACATCCTCTGCGCCGCGGAAACCGGCAGTGGCAAGACTCTCGGCTACATGCTACCTCTGCTTCAACGGCTCTTGGGCCAGCCAAGCCTGTACACCAGTCGTATCCCTGCTCCTCGAGGCCTGGTCCTTGTGCCTTCTCGAGAATTAGCTGAACAGGTGCGGGCCGTGGCCCAGCCCTTGGGCAGCTCCTTAGGCCTCCGGGTGCAGGAGTTAGGGGGAGGCCATGGCATGAGTAGGGTCAGGCTGCAACTGTCCAAACATCCTCCAGCAGAAGTACTGGTGGCCACTCCAGGGGCTCTGTGGAAGGCCCTGAAAGGTCAACTGATCAGCCTGGCGCAGCTCTCTTTCTTGGTGTTGGATGAGGTAGATACATTGTTGGATGAAAGTTTCCTGGAACTGGTGGATTACATCTTGGAGAAGAGTCACATAGCAGAAGGCCCCGCTGACTTAAAAGACCCTTTCAATCCCAAAGCTCAGTTAGTGCTGGTGGGGGCCACATTTCCCGAAGGTGTAGGCCAGCTGCTGAGTAAAGTTGCCAGTTTAGACTCTCTAACCACCATTACCAGTTCCAAGCTCCACTGCATCATGCCTCATGTCAAACAGACGTTCATGAGGCTGAAAGGAGCAGAGAAGGTAACTGAGTTAGTGCAGATCCTCAAGCAGCATGACAGAGCACACAGGACTGGCTCCACAGGAACTGTTCTCGTGTTCTGTAACAGCTCCAGCACTGTGAACTGGCTGGGATATATTCTGGATGACCACAAAATCCAACACTTAAGACTGCAGGGACAAATGCCAGCCTCTATGAGGGCAGGTATCTTCCAGTCCTTCCAGAAGGGTTCCCGAGACATACTTCTCTGCACAGACATCGCCTCTCGGGGCCTGGACAGCACTCAGGTGGAACTCGTCATCAATTATGATTTCCCTCTCACCCTGCAGGATTACATCCACAGAGCAGGGAGGGTGGGCCGTGTGGGGAGTGAGGTGCCAGGAACAGTCATCAGCTTTGTGACCCATCCCTGGGATGTGAGCCTAGTTCAGAAGATTGAGCTGGCAGCTCGCAGGAGGAGAAGCCTTCCAGGTCTAGGATCCTCAGTAAGTGAGCCTTTGCACCAGGAAACCTTACTGCAGCAGGCTTAAATATGATGCCATAACTGGGATCTTTCCCTGTGGGCTGGGTGGGTGAGCGCACTCGTCAGCAGGATGCGCTGGGCTGCTTAGTCACCTTCTAAAGGCCCTAGCTGCTGGTCAACACTGGAGGGTGGACTACTGAACTTGGCTCTCTGTAGTCTTTCACAGGAAGAATAAAGTCGATTTTGGCTTTGTATCATGTCATGATTTCTAACAATAAGTGATGTTTCTGTAGTTTCCACCTGGGGCACAATTCACTGGATTCTGAGAAAATTCACACTCCAAACTACTACACCTAGGACAAAGGCTCCTTCAGTTGATGTTTTTGTTTCAACTTTATTTCCTGCCCCAAAAACCATCCATTAAGGGGACTTCTCTGGTGGTCCAGTGGTTAAGAATCTGCCTCCTAATGCAAGAGATGTGGGTTTGAACCCTGGTGGGGTAACTAAAATCCCACACGCTGTGGGACAGGGCAGCTAAATCCCAGCCTCACCCTGTGGCCAAAGCTAAGACCTTACACAGGCAAATTTTTTTTAAAAATCCATTAAGCCCTCAGGAGAAGGAAAAGGGGATATGACTAGCAATAGAGAAATTTTCTTTATGAACAATGGCCATGGCAAGCTTAGGCTCTCTTAGTGAAATCTCTCTGGGAAGTAGTGGCAGAAGAATAAAAGGCAGACTGACACAGAAGTATTCCTTAGTGTGCATTTCCAGCCTCTGAGTTCTTTCTCATCTCTTGGTTGCAGAGGAAGAGGAGAGGTTAAACATTTTTATAAAACTGGCAAAATAAGCTTATAGCATCCTCTCACTATCTCCTAGGTTCTATAAGCGTTATAGAACCTAGACAGTTGAAAGAGATAATACTTAAGAAAACAACTTAAAACTGCTCACACACAGAAAAGGATTAAGTTGCAGAGAACAGAAATGGGCTCAGAGCAACCTTTGCCAAAAGAGAATATTGTGCTAAATGTACAGTTTTTCCCATATAAGGAAACAGAGCTCAAAATCACACAAATCTGATCTGTGTCCTAAGAGTTGTGTTCTTTAACCACTAGGCTAAGTTTTCTCAAATGTGATTCACATGTAGAATAACTATATATTTCTGTTTGCCTTGAATATTCCTTGTTTATGTCTATGCCTGCTGCAATTTTTAATATTGCCCACTTTGACTCTCAAAAGCAACCCCAAATAGACAATAATTTAGTCACTATCCGTGGACCACTTTGGTGCAACTGCCCAGGAAGCTTGTTAAAAGTACAGATCCCTGAGCCCTACTCCAGAGCTATGTAAGTTTTCTGAGGATTGGTGCAAAAATCCACATACAAGTCTTTGTTGTTTTGTGGAATCCCCAGATGAGTCTCCCACCCTCTTAAGTTAATAAACCATGTATTCTGCCTTCCCCAGGTGCCCAGCCGAGTTATAATAAGGTATTGGTACCCCCACCACACCAGAGGGATGCTCTCAGACAAGTAATCTCTGAAGCCTTGGATAATCGGTGGTCTCACTCTGGCCCACCTGCCATGACAAACCTACAGAGCATTTCCCTTCACATTTTACCTTCTAGCATTCCCAAAGGCAGTCTGTTCTAATTAGGCCTGACTTCATCTGTCCTATTGTGCATCCTCCAATTCAAGCAATTTAGTAGAGAGAAGGAAGGTTTTTGTGATTCGAAGCCAGAGTGGCCCAACCTCTCAATAGCCCAAGACGTCTCCACCTCCTGGGCACATCCCCTCTGCAACAGCCCCAGTAAACAAATGTCCCATCTTTGCTTTTTTAAGGTCAGCCACAGGGAGCCCCTGAAGAAGGTTATCTTACATTGCCACATTACCAAAGGCTGCCCCAAACGTTCCTTCCTGTGAACCTGATCAGGCTAAGGGCAGAGCTGTCTCTTTCCTTCTTTGAGTCGGATCAAACTGTCTTAGTAACACCTCTTCACGGTGTTAACCATGTTTTTCACCTGGGTTGCTACTTAGCCTGTTATCTCATCCTTTCATGGTGGAGAGAGGGGGGATTATAATGATTTTTGCTTTTAAGGGAGAGGGGAGTGTAATGTTTACATTGTCATTTTGTCATGAGTTCGTTTTGAATTTCCTGTTAAAATGGGTCCATCACTCCCACTTTGTGAAGTCATCAGGGCCCTCATTTTGCACCTTTAACATCTCTCGGTGTCAGTTTAAATTGGGATGAGCTTGTCCTCACATTCCTTTCGGCTGTAAATCCAGACCCTGATATGAACCTACCATTGAGCAGAACCACTCCACTGCCTGTGTAGCCTTGGGTAGGCCCCTTAAGCTCTTGTTCTTTTAAGTCTTGGCAGTTGTAAAAATGTGAGAGGGCTATGAATTTATATTTGGGGCAGAACAAGGTCGAGAAGAGTGTGTCTTTGCTTTTATTCTTTCAAACTGGAATGACTCCCCACTCGTCCCCATGGGTCCATATCTCACTTGTCCTTCAGGCCCACTGCCAAGCAGCCTTCCCCAATTCCCCAGTCCACACAAATCTCTGTCTCTCTTTGGGTTAGTACCATACAGCCTAGTGTCTCTTAGGTCAATTTTGCCTCTCAGGCCAATCTCAGAATGTGGGTTTCTCTTGCCCTCCCTTGGCACCAGGGGCTATGCCAGCCCACAGGCATGCTCCCCAGGGGGTGGCTACTAGACTAGGGCACGCGTGGGGAGGCCCAGATGTGAGGGGCCAGGCAAGGTGCCTCTCTGCCTTCACTCTGCTCTCCTCCAAAAAACCCTGAGAGCCTGCAGCCTCCCCCTCAAGTCACAGGTTCCTTATATGACCTCACTGGGTAGTGATGACCTTACAGCCCTTATCACAGTTTCCATGGCAGGGTAACTGCGCAAACGTGCTGCTCTTGGAGAAACTTCCCTACCAGTCCTCTACCAGATAGCAGTCTTTGGCTGTGTAAGAGAGAATGTCTGATCGAATCTTCTATCTAATCTTCACTCTAACTTGTCCTCTGTCCCCTGGAAGGGCAACACAGCAGGTAGGCTGAGACTGGACATCTGTACAAGAGGCATTGTGTATACACAGCCTCACCTGGCCACCACATGTTCCTTTGGGGCTTTCCCAC TCONS_00086111 s 5' 0 TCONS_00086111 s 5' 0 EMBV3_24933 AGCGGCTCCAGGCCAAGAAAGAGGAAATCATCAAGACTCTGTCCAAGGAGGAAGAGACCA Gene GeneID:100336099|LOC100336099:XM_002695953:406_cdna Constitutive 0 NULL GeneID:100336099 19 GENE LOC100336099 NULL ribosomal protein L19-like EMBV3_14374 AAAAAGCTGATGGGGGAGGAGGCTCTGGCGGGGGGCGACAAGTCAGACCCGAACTTTAAT Gene GeneID:537433|SOBP:NM_001101170:56_cdna Constitutive 1 NULL GeneID:537433 9 GENE SOBP JXC1 sine oculis binding protein homolog (Drosophila) EMBV3_30603 TATTCTTGATTTGTGTTCTTCAGGAACACTATTTTACCCATTATCCTTAAGTATTGGTCC Gene GeneID:517113|DHTKD1:XM_002692049:33_cdna Constitutive 2 NULL GeneID:517113 13 GENE DHTKD1 NULL dehydrogenase E1 and transketolase domain containing 1 EMBV3_19066 AGAGTTCCGCAAGATAGCCAACAGTGATAACATGTAGATGAGTGGAATATTGGCCGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39735 ACACAATTGAAAGTGTTCACCCCGAAAAGCCACAGCCCACCAAAGAGGAGCCCAAAGTCC Gene GeneID:522091|ASXL1:XM_002692288:1653_cdna UTR3_Alt 2 NULL GeneID:522091 13 GENE ASXL1 NULL additional sex combs like 1 (Drosophila) EMBV3_35981 CACGGGATGAAGACATCTGACACCATTATCGGCTACGGCCTCTTCGGACACTGCATTGTC Variant GeneID:540431|YIPF3:NM_001076219:338_cdna 640^771 1 EMBV3_43533 GeneID:540431 23 GENE YIPF3 MGC142928 Yip1 domain family, member 3 EMBV3_15772 CACTTACTGTAAAGTGAAGATTGTTCTGCTGCATGTGGCGTGGACCATGCAGATTTCTGT Gene GeneID:512236|PRPF4B:NM_001075557:214_cdna Constitutive 0 NULL GeneID:512236 23 GENE PRPF4B MGC139658 PRP4 pre-mRNA processing factor 4 homolog B (yeast) EMBV3_05505 GGGCTTCCACTGCCACCCCTCCAAGGGGCCCATATTCTTTCAGGTGTTATGTATATAGTT Gene GeneID:615107|CXCL10:NM_001046551:107_cdna Constitutive 0 NULL GeneID:615107 6 GENE CXCL10 MGC137238 chemokine (C-X-C motif) ligand 10 EMBV3_27722 TTCGTATTTATTCACTTTTATTTAGCACCAGGGATGGGGATGAGGGTCAGGGTCCTGGGG Gene GeneID:286806|ADAMTS4:NM_181667:203_cdna Constitutive 0 NULL GeneID:286806 3 GENE ADAMTS4 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 4 EMBV3_32349 AAGAACCCTGAGGAGCAGACAGAGAGGAATGGTGACGTGGCAAACCTAGAGAATGAATCC Gene GeneID:520743|KCNJ6:XM_002685169:184_cdna Constitutive 0 NULL GeneID:520743 1 GENE KCNJ6 NULL potassium inwardly-rectifying channel, subfamily J, member 6 EMBV3_34563 TACTCGGTCACGACTATCTTTAGGACCACCAGGTGATGGTCCCTTCCTTGGTGTGCTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13751 GCTCGTGTGCCTGGCCACAGGCTTCTACCCTTCCACGGGCTCACAGACCAGGACCAGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21920 AGTTGGGTGGGGGTCCAGAGGAAGAGAGGGGAAGTGTGGTGTCTATCTGTGAATGAGAAA Gene GeneID:780866|AQP3:NM_001079794:76_cdna Constitutive 1 NULL GeneID:780866 8 GENE AQP3 MGC143308 aquaporin 3 (Gill blood group) EMBV3_00007 CATTTCATTACATCGGAGTTGGTCACTGAGAAAAACCTGGAAATTGAACTCCTAAGCCTA Variant GeneID:508698|HAUS2:NM_001076819:130_cdna 111^203 1 EMBV3_36622 GeneID:508698 10 GENE HAUS2 CEP27 HAUS augmin-like complex, subunit 2 EMBV3_00478 CACCAAGGGTCGCTTTGCTGTTCATCGTATTACACCTCAGGAGGCCAAGTATAAATTGTG Gene GeneID:614449|LOC614449:XM_002683863:2_cdna Constitutive 0 NULL GeneID:614449 X GENE LOC614449 NULL similar to ribosomal protein S4, X-linked X EMBV3_10059 CCCCCTGTTGGTACATTTGGTTACCTCATTTTGCTGTTTGTTTCAGATTATGGAAAGCTC Gene BVT0101_054064 + 1 EMBV3_02243 GK000011.2:26390226-26402655 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227835 TCONS_00227841 TCONS_00227846 TCONS_00227849 TCONS_00227838 TCONS_00227845 TCONS_00227843 TCONS_00227848 TCONS_00227847 TCONS_00227844 TCONS_00227833 TCONS_00227834 TCONS_00227842 TCONS_00227850 TCONS_00227837 TCONS_00227840 TCONS_00227836 TCONS_00227839 1 XLOC_138349 Coding TCONS_00227845 XLOC_138349 Coding Coding RNF38 8:60965521-61057110 j TSS170012 7127 1 TCONS_00227845_5 432 0.0126280342360039 13 0.922326068917325 0.00343001496589791 0.00401859189861296 0.00304794476439994 0.00181185827167191 0.00135137817838587 0.000930167588852676 0.000515853710669697 0.000905075341918638 0.00200989849816251 0.000261316704505152 1.59274232991308e-05 0.000168369507507068 0.00056712911595764 1.38526898948153e-07 0.000530859019210248 0.000299697004125926 0.000343732655615879 4.40456812315363e-13 1.08858884087272e-07 0.00198358471673463 0.000202093627885867 0.00143041278443652 1.8533033019165e-09 0.00125345515403917 0.000705414850742277 0.00115998035401602 0.00173582364650005 0.000399291625813643 1.66025426598786e-16 1.86025684312962e-14 XM_005210094.1 RNF38 PREDICTED: Bos taurus ring finger protein 38 (RNF38), transcript 0.0 8980 100.00 0.698470604742528 XM_005251364.1 RNF38 PREDICTED: Homo sapiens ring finger protein 38 (RNF38), transcript 0.0 6648 89.37 0.698330293251017 TCONS_00227845_5 sp|Q9H0F5|RNF38_HUMAN RNF38_HUMAN RING finger protein 38; 0.0 862 98.61 0.997685185185185 6 coding 1 1 1 1 0.121263841249514 0.520917491817249 -0.0808026785745538 0.16466602691196 GCCCCATGGTAGTGTTGGTGCTTCTTTTCAGTGCCAGTCCATCCATCACGACCACATTTGTCATGATGACAGTGACAAGATATCTCCCGGGGCCAATTCAGCACCTCTACCTGGCCATCCTAACAAGGTGATTTGTGAAAGGGTGAGACTTCAGAGCCTGTTCCCTCTCCTCCCAAGTGATCAGAACACTACCGTTCAAGAGGATGCTCACTTCAAAGCTTTCTTCCAGAGTGAAGATAGTCCAAGTCCCAAGAGACAGCGCCTCTCTCATTCAGTCTTCGATTATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAGCCAACATCACTTCTCAGGGGAACGATGCAACACACCTGCACGCAACAGAAGAAGTCCTCCTGTCAGGCGTCAGAGAGGAAGAAGGGATCGTCAGTCTCGACTTAATTCCATTAGTCAAGATGAAAATTATCACCATCTCCCTTATGCACAGCAGCAAGCAATAGAAGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACACCCTGCTGCTCATCCACCCCAGCAGAATGCAGTAATGGTTGACATACATGATCAGCTCCATCAGGGCACCGTCCCTGTTTCTTACACAGTAACAACAGTGGCACCACATGGGATTCCCCTCTGCACAGGCCAGCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGCTCTGTGGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAAGCATGTTCTGTTCAGCACTTACCAGTACCGTATGCTGCATTTCCACCCCTTATTTCCAGTGATCCGTTTATTTTACATCCTCCCCATCTTTCTCCCCATCATCCTCCTCATTTGCCACCTCCAAGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAAAGGATAGAAAACGAAGTGGAACTCTTAGGAGAACATCTTCCTGTGGGAGGTTTTACTTACCCTCCATCTGCCCATCCCCCGACATTACCTCCATCAGCTCCTTTGCAGTTCCTAACACATGATCCTTTGCATCAGGAGGTTTCGTATGGAGTACCTTATCCTCCATTTATGCCTCGGAGGCTCACAGGACGCAGTAGATACCGATCCCAGCAGCCCATACCACCACCCCCTTACCATCCCAGCTTACTACCATATGTGTTATCAATGCTTCCAGTGCCACCTGCAGTGGGCCCAACTTTCAGCTTTGAATTGGATGTGGAAGATGGAGAAGTAGAAAATTACGAGGCCCTGTTAAACCTAGCAGAGCGACTGGGAGAGGCCAAGCCTCGAGGACTGACTAAAGCAGATATTGAACAACTTCCTTCTTACCGGTTCAATCCTAACAACCACCAGTCAGAACAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTACTTAGAGTTTTACCCTGTAACCATGAGTTCCATGCCAAGTGTGTCGACAAATGGCTTAAGGCAAATCGTACTTGCCCAATCTGCCGAGCTGATGCTTCAGAAGTGCATCGGGATTCAGAATGACCAACCTAAGAGCACAAATTTAGTTTGGGTGTTCCTCATCACATGTATATACGGACTATCCATTGAACTTAATCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTTATACTAACCGTGTGATTGGAACTCCAAAGACTTTTTCTTTAGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTTCATTAAAAGTGGTAGCTCCAGATGATATAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTGAGTGGCAATGAGTGCAGCGTATGACTGTTGATGGTAAATGTATCTGTGTGTGTGAGAGAGAGAATGTGTGAAACTACTTGTGTGAGGGCATGGTAGCTAACGTGTGTATGAGATCCTATATACCAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTATTTAAACAGCACTAGTACTGTACACTGGTTTCCCCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCAACGATAAGCATTGAATACTCCATCCCCTTCCCTCCCAGTGAATGGAATGAGAAAAGCCTTCTTCCTTTGCTTCAGGCAGCTGTCACCTTCTCTTCGTTGGTGGTCCCAACTGGGTCACTTAAGGAAAAAGTGTAATAGATTCTCACTCCATGAACCTGAAATTTTGATTTTTGTCGTGAAAAAGAAATTTTTAAATCTCCAACTTGCTGTTTCCAAAAAGAAGGTGCAATATCATACATCATCAGTTAGCAATATTAGCATTTCAATCAGTGATTTGAATGTTGATACTCTCTTGGTTTTCCTTTACATTTTCAGTAAGCTTCTTAGCCAGACGTGCTTGTGATTTTTTTTTTTCTTTTAATGTTTAGGTTTGTAGTCTATTCTGAAGATATTTGAGTAATATATTTCTAAGAATACCACTGGTCCCATGAAGTCTCACCTCTTCTAATTCCACCAGAAAAAAATCTGTTAACTCAGCTTGACTTCTGATATGTTATTTGTTCAAGCTCCCACAGGCAACAAAATTGTTTTAAGAAGACTATGTTTCTGTTCTGCCAAGCTCCAATTTTGAAAGTTGTCTAGTTCTTCTCCCCTCAGTAAACGTGCTTCTCATTGAAATCCTCATTTCCAGGGTGGATCAAGTGCTGTGACAGCTCGAGTTCCTTAGACCTGGTGTGCTTTGATGTTTTATCACTTTTCTTTTTTGTTGAATGAGAAAAAAATTAACAGGTGTCCAGAATACTTGCAGTATAAATGAAGATTTGATTTTTGTATAAAAAATAATGCTGTAAAACAGGAATTGACCTGCATTTAGTTGCTCTGAAAAGAATACATAGCTGTGTGGATTTCTTTGTTTTTTTAATAGGTTCCTTGAGCATAATTCAGATCGTTTCAAGTCATTTTTCTAGCAGTGTTTGAATTCCCCTCTCATTCTTCTAGTGTCTTCACCATTGTCTGCCTCTTCGTGCAGTTGCTGTCCTTCTTCTGGTTGCAGTGGCACAAGCTGCAGTTCTCCAGTCAGGACTGTGATGACTTGCTGCCAACCTCAGCTTTCGTTTGGCTGTGTCCGTTTTCTACTCAGTGTTAACTACTTGTTACTGCCATGCTACTTGCCTTCCCTTGAAGACTATAAGCTTATCACAGCTTAGAGTTCAGTAAAGTCAATTCACACAGAAGCACAATTTTGCCCTTTTCCAGACACTGTTGCCTCTATCTAGTCCTACAAGTAGGATTTTGCATACTTTGTTTGCCCCTGTATTTGTCAGTGCATCAGAAATACATCTAAACAGTGGTGAAATGCACATGTTACTTTTAAATCATTAGAGTATTCCCTACCTGTTCCTAATGAATAAAGTGTGTTAAAGACCAAAATTACTGGTGTAATAATCAACTACATTACAAATCACGTATAGTTTAATCTTTATTTTTTTTAATTAAAAAAATCATGTTTAAAATGGCAAAAGCCCATCTTATACATAGACTCTTTTATATAGCTGCAAAAAATTTATATCTGTACAGATCTAACATAACATTACTACACTCAGTATTCATTTTATTGAAGCATGCAAGTAAAGCACTTTTTCTAATTTATATAGATACTTAATTAACAAGGCACACTGTACTAATGACTAGGAAAAGTAGCTCTTTCTTCCCTCTCTGGGATGATGAATTCTTGTCATACTACCCCTTTTCCATTAAATTTTTGAGAGGCCGTTGGCAATTTAGGAGGCAGCAGGGTCTATTTTGGTAAAATCCAGAATTGTTGCACTCTTGTGGCTGATCTCTCTTTGGGAATGTCTTTTCTTCGCATGGGGCTCTTAGAGATGTGTGCAGATTTGCTTATTAAGTAGTTAGTGTGTGTTAGGAGCGTACATGCATGTGTTCCAAACCAGCTCAACCTAGCCACATTTAGCAACCGTGTGGCTAGCAGAAGAGAAAGAACAGTTGATTTGTACCCAGCTGTTGACTCCTTAGGTGATGCACCAGATAGCAGGCAGATGTTGGTTTCTTGCCTTCTTCCCCTTTCCTCCTAAAACAATATTGGCTTTACCACCTTAACTCGGCTGTGTTTTTTTGTTTTCCTTTGCATGAAATACCACCTTTGTTGGTTTTTAGCACCCCCTCTTCCCCAAAAAGAAAAACAAAAACAAAAAACAAGGCCTCCAGGTATCAAGATCTCATTAGGATTTTCTGTCCTGAATTTTTTCAAGCAAAATCTAGAAAATGTGAAAGCCTATTTAGATTTTATACACTCTCTGAAATGTGATTTGTTAAGATTCTTATATTTGGGCCTCTTATAATATTTTAAATGAGATCTACCAACTCACTTACGAGAATATTTTTCACAGATATCTTTAGGCCTTTATTAGAAAGCTATTTTCCCCCTGTTGGTACATTTGGTTACCTCATTTTGCTGTTTGTTTCAGATTATGGAAAGCTCACAGGGGTGTATTTTGGAATCATTTGCTGAGTCATTTCCTCAAATCATACTCCATTGTATCAGTTAACATATAGTTTTAAATGTACGTATTATAAATATCTGTAACCAAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACATTGGGTTGTGTTTGGTGTTACTGTGTTAGGTAGGGAAGGGTAGGGGTCATGTGTGTTTGGAGGGAGGGATGTAGGGGACTTCCAGCAGGAAAATAGAGCTCTTGAGCTCCGAGCAGCCAAACTTAACTTTGAGGAAGTAATTCAGATTTTGTTTCTGTGTTTGTGTAAACGACTTAGAAACATAAAACCAACTTGCTTTATAACTCGTGTGGCAGATACTTATATCTTCAAAAAGGCCAAGAAGATAGCTCGAGTGTAGGCACATGTACATGGTATGAGCTCATTGAACAGTAAAGTTACATTAAGTGGGTGCCTGGAGTTCTTTCTATTTGTGTCAACCATAAGATACAAAAGATAGTTGGGCAGATTGGTTCACGTTAGATATAGTATGTTATGTCTAACTTGTCCACATAATACGGAAAGAGGAGCTCATTTTCCATACATGTTTGTTGAATTGCTTTCTTTTGACTAAAAAAGGAAGAGAGTAAAGCCATCTACTTATATATTATTACATGCTGAAAGTGGAAATAGGATGAAAAAAATGAGGCTAAGTAATAGAACCGAATTCTCCCTCTTTCAGGAAGCAGTCCTTTGGCTCCAGTACTTCTTGACAGAAGCATTCAGAAAAGTGACCAATCAGGGTCACTGATTGTGTCCCTCAGTTTTCCAACATACTTGAAAGAATGTTTGCATTTGAACTGTGAATGTCTCAAAACTTGTTGTCTTATATTACCGAGGCATTTGCTGCTCAGTCAGTACCTGTGCATTCTCTCCCACCTCCCTACTTACTACTGTAGGCAGCGAGTCCCATGCGGCTGGTTCTGACCAAGGGACCATAAGGGTAGGCCATGCAGCGCTCTCTTCTGCCGTGGTGATGGCAGGCCTGGATCCTGAGTCACTGCCTGAAGAGCCACTGGATTCCACGGATTTTGTGTTAACAGTAAACTGAGGTCCTTAGACTACTCTTTGTCAGGACTTTGTCTTTGCCCATTTATTCCCCCCTTTCAAAAGACTTAAGTCTGTTTAGTCTTATTCTTACAACACTTTGCTAATACTAATCCTCAAGTGTACCAGTTAAACACGACTGACTACAGTTAACTTGCAAGGTCAGATTTGCACCACATGATAAAATTGTTCAGGTCATTACCAAGTATCTCAGGTCTCTGTGTGCTTCAGGCTAATGATAATGAAACATTACCTTTGATATCCCTAGACTTCTCAATGTTTTCATTGCATGCCTTAATATACTACAGTATGATTAGAAATATTTTACTGTTTGTATAGTTGAATGTAATTTATTTCTATATCAATACATAAATATGTAAAAAGCAGACTTAGTTTCTGTGAACATCATATATAGCTTCCCTGGCTAACATTTAAGAACAGAATTTCCTGTTTGTCAGTTTAATTCCCAAATTAAACATTTGTTTATAGCACCTTCCAGATTTGTACCTATTTAAAAGATTAACTTTCCAGTCAGAGAATTGGGCATTCTAAAAGAGCAACAAACTTTGAACCCATACAGAGTGTGTGGGGTAGACTCCTACAAAGATTGCTCTAAAGTGCACATGCTCTTAACCTTTTTCATGTGGTTCTTCTGCCTCCCAAACTGGCAGGAACTATAGGAATGAGAAAGATTGAAGGGGAAAAAAAGAACATAGTGACAGCCAGGGATACTGAATGTCACCTTGCAGTTTGGAAATGGGCTGTAGGGTCAGTATAGATGTTTCCTCGCTACAAAGATGAGGAGAATTAACTCGGGATGAAGGAACCCACGTTCCCTTCAAACCTCTATTTCTTGGTCTACACGTGGAAACAAAGTTTAGTGGCTGGTCAACAAAAGGACCTACAGCCTACACCCAGCACCCTGCATTGTATACAGTCGACAATGTCACCAGCTGCCTCCCTTTCAGTGTTAGAATCCCCTTCCCACAACTCTTCTGTGATAGTAAACTTAAGAGATCCTAAGGCAGGCTCCCTCTTCCCACTACCCTAGCACCTTCAGGTTTAGATGAGAGTAAGTTTTATATTGGACTTCCCTGGTGGCTCAGACGATAAAGCGTCTGTCGTGCGGGAGACCTGGGTTTGATCCCTGGGTTGGGACGATCCCCTCGAGAAGAAAAGTTATCCATCCTTTTTGGT EMBV3_03408 TTGGCCTGGTGGGGAAACAGAAGCCCAGGGTGGAGAACTAAGCGGGTATAAGGCCAGGTG Gene BVV0102_121626 + 0 NULL GK000030.2:86607704-86944027 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247504 TCONS_00247505 TCONS_00247506 1 XLOC_151346 Coding TCONS_00247504 XLOC_151346 Coding Coding EFNB1 X:86943264-86953967 j TSS185333 2453 1 TCONS_00247504_2 225 5 0.771257708839469 0.002858681404757 2.83245711123384e-08 0.000618835268504449 9.86331753497235e-05 0.00148377970931715 0.000199853512584594 0.000304869043409904 0.000703397570760233 0.00052804901829189 8.49087569371745e-05 6.35767041494421e-06 1.52163688011284e-05 8.94870449862792e-05 0.000268906484660868 7.43295905952962e-05 0.000981028819180994 2.99024872392067e-10 0.000144077056959936 9.21472303492488e-05 0.00206728661746379 0.000581771468926234 7.49367805716712e-05 0.000316955133037591 0.000185733575464132 0.000229793556264609 5.54213691240202e-05 0.000282009990498284 1.05945134061997e-05 4.688914186752e-05 7.40376028028847e-06 NM_001080299.1 EFNB1 Bos taurus ephrin-B1 (EFNB1), mRNA. 0.0 2938 99.94 0.665715450468814 NM_004429.4 EFNB1 Homo sapiens ephrin-B1 (EFNB1), mRNA. 0.0 3115 88.76 0.976763147166735 TCONS_00247504_2 sp|P98172|EFNB1_HUMAN EFNB1_HUMAN Ephrin-B1; 2e-151 430 94.67 0.995555555555556 1 coding 0 0 0 0 0.164113625237452 0.391877628536076 0.0282613659564187 0.719950660083366 CTCAGCCCTGGAGTGGAAGAGGGCAGCTTCTTTACTTCTCTTCTCCTTGAGTTAAGGTTCCTGAGTGGGAAGGGGCTGGTGATTTACCCAAAGATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCTGGGCGGCCCTATGAGTACTACAAGCTGTATCTGGTGCGGCCTGAGCAGGCAGCGGCCTGTAGCACTGTGCTTGACCCCAATGTGCTAGTCACATGCAATAGGCCAGAGCAGGAAATCCGCTTCACCATCAAGTTCCAGGAATTCAGCCCCAACTACATGGGCCTGGAGTTCAAGAAGCACCATGATTACTATATTACCTCTACATCCAATGGGAGTCTGGAGGGACTGGAGAACCGGGAGGGAGGTGTGTGCCGCACACGCACCATGAAGATCGTCATGAAGGTTGGGCAAGACCCCAATGCTGTGACACCCGAGCAGCTGACTACCAGCCGGCCCAGCAAGGAGGCAGACAACACTATCAAGATGGCCACACAGGCCCCTGGTGGTCGGAGTTCCATGGGTGACTCTGACGGCAAGCATGAGACTGTGAACCAGGATGAGAAAAGTGGCTCTGGTGGGAATGGAGGCAGTAGCGGGGACCCCGACAGCTTCTTCAACTCCAAGGTGGCGTTGTTTGCAGCTGTGGGCGCTGGCTGCGTCATCTTCCTACTCATCATCATCTTCCTGACCATCCTGCTACTGAAGCTGCGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGCCCGCCCTCTCACTCAGCACCCTGGCCAGTCCCAAGGGGGGCAGTGGCACTGCGGGCACCGAGCCCAGCGACATCATCATCCCCTTACGGACTACAGAGAACAACTACTGCCCCCACTATGAGAAGGTGAGTGGGGACTACGGGCACCCCGTCTACATCGTCCAGGAGATGCCGCCCCAGAGCCCAGCGAACATCTACTACAAGGTCTGAGGGCCTGAGCAGCCTCGGTCCCGAGGGACAGTCAGCCGGGACTGCACCTCCCCTTCCTCACCTACACCCCTCCCTTTGCCAGCTGTGCCCACCTTTGTATTTAGTTTTGTAGTTTCTTGGCTTTTATAATCCCCCTTTTGCTGCACCCTCTGGGCTTTGGAGGGGGGTGCTTGTGCCCCCAGCCCCCATGCTCTTGTGCCTTCCCCCTCTGGCCAGGCCTCTGGGCTCTGCGGGGGTGCCCCTTCTTGGAGGGCAGGGTCGGACGCTGATGGACAGCAGGCAGGGAGATGCCCCCCTGGCCCTGCCCCACTTCGCCCCCTTTCTCCCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGTTTTGTGTTCATTTTTTAGCTGTCAACTCATTTTCATCTGTTTTTTTTTTTTTTTTTTTTTAAGAAAAATGGAAAAGGCAGCCCCTCCCCAGGTTTTCTGAGCCTGGCCTACCCCAGTATCAGGGGCCTGGGGCAGGTTGTGACCAGCCAGGAAGCATAGGATGGCACTTCTTTTGTAAACTCCTTGACATTTTTTTTTTGCGGGGGGTGCATGGTGGGAGGCAGGCCAGGGCTGTTCTTGCCCATGAGGGAAGACAAGAGTGTCACTGGGCAAGGTGTCTCACCCTCCCCCACTGACCCTACTTCTACAGTGCTGATCTTGGCAATGGGGTAGTGGCTGCCACCCTTCCACCAAAAAAAAAAAAAAAAAAAAAATCCCTTCCTTGTGGGATTCTTGGGCATCTCCTGCCTCCCTCACTCTCACGGTAATTAACGTCTTAATTGGCTGTTGCCTGGGGAACAGGAGAGCTGCTGCAGGCAGATGACCTCATGGGGGGTGGAGGGAGGTGAGGTGCCCAGGTGGCTATTTGCCCTGCAGAGCTGGGAGTTCCCCCCTCTCCCCTCTGCCCTGTTCTCCCCTCACCTTTGGCATCCTTGGCCTGGTGGGGAAACAGAAGCCCAGGGTGGAGAACTAAGCGGGTATAAGGCCAGGTGGCCTGCTCCTTTTCTGGGCTCTATCACAGGTGGGTGTCCCCCTAACCCAGCTCCCACTAGCCCCCCAGTCTTGGTCTGGGGCTTGGAAAGAGGAAGAGGCTTGCCCAGGGCTTAGCCAGCACGCCGTGCACTTTGACCCCGGCTCCTTGCCAGCACGGCTGCTAACAGATTGCCACTTGCAAGCGCCTTGCAGGCGCTCCCAGAGTGGCCATGGAAGGAGCTGGGCCTTCCACCATCCACCTCCACACTGCCTCCTGGCCAGCTGCCCACTCCAGAGCCAGGTGGGAGAGGGAGCAGGACAGCCAGCCCCTTCCAGGTGGCAGTCAAAAGGGTTTTTTTGTTTTTGTTTCTATTGCCATTTGTGTAAATACTAGTCTTTTTGGAAAAAAATAATGTAAAGATGTTTTGTATAAACTCTGAATTATTTTCTTGTTGCTTTTTTCTTAGAAAAAAATGAGAACT EMBV3_34990 AACAGGAACTTCCCGGAGGCCATCCTCAAGGTGTTCAGCAAAATGGAACAGGTGGTGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07521 CAGACTGGAGTTTTTGGTGCTGAATAGAAGAGCAGTTGCTGAAAAACCAGGGGTTTGGTG Gene GeneID:528142|PSME4:XM_002691325:472_cdna Constitutive 2 NULL GeneID:528142 11 GENE PSME4 NULL proteasome (prosome, macropain) activator subunit 4 EMBV3_18445 GTTTTGTTTTGTAAGACAAAGAAGATGATTATTTGTGTAAGAATTTCTCTTAGAAATAAA Gene GeneID:506867|NSL1:NM_001101876:42_cdna Constitutive 2 NULL GeneID:506867 16 GENE NSL1 MGC159505 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) EMBV3_00716 AAGGGTCTGGGTCCAGCCACCTACCTGAAGACACAAGCAAGGTTCCTATCTGATCATTCC Variant GeneID:507537|SPARCL1:NM_001034302:16_cdna 233^296 1 EMBV3_34828 GeneID:507537 6 GENE SPARCL1 MGC127494 SPARC-like 1 (hevin) EMBV3_22632 CGGAAAATTATCGGCATCTTTTCTGGGCACCAGTGGGTAGACGTGAATGGTTCGCCACAG Gene GeneID:538575|PRSS23:NM_001080306:29_cdna Constitutive 0 NULL GeneID:538575 29 GENE PRSS23 MGC139156 protease, serine, 23 EMBV3_25402 ACACCGACATTCCATTTGCCCTTCTGCGGGCCCAACCAGATCCAGCATTACATCTGTGAT Gene GeneID:782288|LOC782288:XM_002699124:191_cdna Constitutive 0 NULL GeneID:782288 29 GENE LOC782288 NULL similar to Olfactory receptor 10G9 EMBV3_03170 CCTTGAAATACCTCTTCTGGCCTTTATAGGAGACACCCCCCAACCTCTTGAGACATTCCG Gene BVV0102_033811 - 1 EMBV3_17291 GK000024.2:846950-850300 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15821 ACCTGTCTGCTGTGAGGCCTCCCCCTGTTCTACCTCCTCATGTTGCCAGCAGTCTAGCTT Gene GeneID:783535|LOC783535:XM_002683606:2_cdna Constitutive 0 NULL GeneID:783535 1 GENE LOC783535 NULL similar to keratin associated protein 10-2 EMBV3_19509 TCCTCCACCGTGCCCTTTGAGTCAGGGCGGAAACCAGATACTGAAGAGACTAACAAACAG Gene BVV0101_009349 + 1 EMBV3_17178 GK000002.2:44973220-45516361 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071418 TCONS_00115686 TCONS_00130084 TCONS_00039226 TCONS_00129783 TCONS_00178325 TCONS_00233372 TCONS_00064812 TCONS_00079609 TCONS_00116100 TCONS_00080603 TCONS_00020157 TCONS_00078719 TCONS_00129573 TCONS_00063486 TCONS_00063080 TCONS_00200574 TCONS_00209711 TCONS_00175855 TCONS_00218945 TCONS_00252107 TCONS_00021595 TCONS_00008224 TCONS_00115865 TCONS_00135686 TCONS_00056146 TCONS_00161097 TCONS_00089437 TCONS_00208264 TCONS_00010053 TCONS_00107179 TCONS_00170823 TCONS_00238307 TCONS_00116665 TCONS_00239419 TCONS_00131137 TCONS_00090421 TCONS_00122313 TCONS_00021878 TCONS_00238933 TCONS_00251907 TCONS_00063181 TCONS_00199037 TCONS_00111497 TCONS_00079498 TCONS_00122282 TCONS_00209636 TCONS_00251929 48 XLOC_043189 XLOC_069855 XLOC_078795 XLOC_023044 XLOC_078496 XLOC_108098 XLOC_142854 XLOC_039536 XLOC_048494 XLOC_070269 XLOC_049487 XLOC_010835 XLOC_047607 XLOC_078286 XLOC_038213 XLOC_037807 XLOC_122226 XLOC_128222 XLOC_105634 XLOC_132264 XLOC_155048 XLOC_012268 XLOC_003782 XLOC_070034 XLOC_081909 XLOC_033949 XLOC_097989 XLOC_054222 XLOC_126777 XLOC_005605 XLOC_063090 XLOC_103665 XLOC_144974 XLOC_070831 XLOC_146085 XLOC_079842 XLOC_055202 XLOC_073868 XLOC_012551 XLOC_145599 XLOC_154848 XLOC_037908 XLOC_120690 XLOC_067397 XLOC_048383 XLOC_073837 XLOC_128147 XLOC_154870 NonCoding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_06054 TGCCACGTGCTGGCACTCTCCTCCCACACCAAGAAGCTGTAAATAGAAAGTCAGGATATA Gene GeneID:511801|UBE2D4:NM_001075539:35_cdna Constitutive 1 NULL GeneID:511801 22 GENE UBE2D4 NULL ubiquitin-conjugating enzyme E2D 4 (putative) EMBV3_27038 CCTCCTGGATGGTTGAGAAGATGCGGAAGTACATGGAGACACTTCGGACAGAGAATGAGC Gene GeneID:505524|DNTTIP1:NM_001098876:877_cdna Constitutive 2 NULL GeneID:505524 13 GENE DNTTIP1 MGC166131 deoxynucleotidyltransferase, terminal, interacting protein 1 EMBV3_20049 TCAAGACTTTTTTCAAGCACATTTTGACTCCTCGTGTGGGGAGCCCAGGCATCAGTGACG Gene GeneID:281096|CSF3:NM_174028:18_cdna Constitutive 0 NULL GeneID:281096 19 GENE CSF3 NULL colony stimulating factor 3 (granulocyte) EMBV3_14688 TGGGCGGGGTCATTGGGCTCCTCATCTTCATCCTGCTGGTTAAGAAGTTCATTGCCTTCA Gene GeneID:538100|SCN4B:NM_001076912:107_cdna UTR3_Alt 2 NULL GeneID:538100 15 GENE SCN4B NULL sodium channel, voltage-gated, type IV, beta EMBV3_14388 ACACCAGGCCTCCGACTTATGCCAGGTTCCGGCCCATCACAAAGAGCTTTTGCATCAAAA Gene BVV0102_219563 + 0 NULL GK000022.2:43659286-43674719 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31220 AATATAGAGCCTACGAGGAGTCATCCACTTCCCTGCTCTTATCCATGACAGTGCCCCCTC Gene BVT0102_052240 - 0 NULL GK000015.2:48551930-48589937 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061565 TCONS_00061563 TCONS_00061566 TCONS_00061562 TCONS_00061564 1 XLOC_037039 Coding TCONS_00061565 XLOC_037039 Coding Coding TRIM6 15:48559280-48578157 = TSS45796 1891 1 TCONS_00061565_4 487 8 0.900243695698241 0.0106097792572326 0.00200026649369862 0.00345613040635956 0.0025196519245695 0.00233593163650878 0.000596389585520735 0.00250482196907249 0.00376772562554455 0.00522621125263142 6.06411609303777e-05 9.20949151037695e-05 1.28082892125973e-05 0.00109714713880294 0.00136015547489065 6.08183163711039e-07 0.00663035364370969 0.00310729561958298 0.00226820082744798 0.00497336078655136 0.00405035681000643 0.00140825936696309 0.0026954950380259 0.00106256810724574 0.00295284203479963 0.00696794249070249 0.00460091764001197 0.00195274617521969 3.32561120322792e-07 0.000277545714074184 0.000896583344969345 XM_005216135.1 TRIM6 PREDICTED: Bos taurus tripartite motif containing 6 (TRIM6), 0.0 3411 100.00 0.999471179270227 NM_058166.4 TRIM6 Homo sapiens tripartite motif containing 6 (TRIM6), transcript 0.0 1763 84.33 0.848228450555262 TCONS_00061565_4 sp|Q9C030|TRIM6_HUMAN TRIM6_HUMAN Tripartite motif-containing protein 6; 0.0 857 83.20 0.997946611909651 10 coding GCCTTTCTGCCTCGGTGGCGGCGGCAGCAGCTGTAAATCCTCGGCTCTGATCCAAGTCACAGATTGCAGGATTCCAAACACAAGAAGCACCTTAGAAGTCAGGGCTGGGCAGGCAGAGGCCAGGAAAGTGGCTACAATGACTTCAGCAGTCCTGGTGGACATCCAAGATGAAGTGACCTGCCCCATCTGCCTGGAGCTCCTGACCGAACCCCTGAGCATAGACTGTGGACACAGCTTCTGCCAAGCCTGCATCACTGCAGACAACAAGGAGTCCATGCCTGGCCAGGAGGGGCAGAGCAGGTGTCCTGTGTGCCAGACCAGCTACTGGCTTGGGAACCTGCGGCCCAATCGGCACCTGGCCAACATAGCCGAGAGGCTCAGGGAGGTGGTGTTGGGCTCAGGGAAGCAGCTGAAGGTGATTCTTTGTGTGCACCATGGAGAGAAACTCCAGCTTTTCTGTGAGGAGGATGGGAAGCTCATTTGCTGGCTTTGCGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCCTCATGGAGGAGATAGCCCAGGAGTACCAGGAGAAGTTCCAGGAGTCTCTGAAGAAGCTGAGGCAAGAGCAGCAGGAAGCCGAGAAATTAGCAGCTGTTATCAGAGAGAAGAGGATATCCTGGAAGAATCAGATGGAACCTGAGAGACACAGGATCCAGAAACAGTTTGATCACTTGAGGAGCATCCTGGACAAAGAGGAACAGCGACAGCTGAAGAAGCTGGAGGAGGAGGAAAGGAGAGGGCTGAACATCATAGCAGAAGCTGAGGTCGAGCTGGTCCAGCAGAGCCAGTCCCTGAGAGAGCTCATCTCAGACCTGGAGCACCGTTGTCAGGGGTCAGCAACAGAGCTCCTGCAGGATGTGAGTGACGTTGCGAAAAGGAGTGAGTTCTGGACCCTGAAGAAGCCAGAGGCTCTCCCCACGAAGCTGAAGAGTATGTTTCGAGCTCCAGATCTGAAAAAGATGCTTCGAGTGTTTAGAGAGCTGACAGATGTCCAGAGCTACTGGGTGGACGTGACCCTGAATCCACACACGGCTAACTTAAATCTTGTCCTGTCTAAGAACCGGAGGCAGGTGCGATTTGTGGGCGCTCAGCTGTCCGGATCTCATCTGGAAGAGCATTACGGCTGTGGTGTCCTGGGCTCTCAGCACTTCTCCTCAGGGAAGCATTACTGGGAGGTAGATGTGGCCAAGAAGACTGACTGGATCCTGGGGGTGTGCAGTGATTCAATGGGACCTGCTTTCTCTTTCAACCAGTTTGCAAACAATCGGAATGTTTACTCCCGATACCAGCCTCAAAGTGGGTACTGGGTGATTGGATTACATCACAAGCATGAATATAGGGCCTACGAGGAATCATCCACTTCCCTGCTCTTATCCATGACAGTGCCCCCTCGCCGAGTTGGGGTGTTCTTAGACTATGATGCTGGCACAGTCTCCTTTTACAATGTCACCAACCATGGCTTCCCTATCTACACCTTCTCTAAGTATTACTTTCCTACAACCCTTTGTCCGTATTTTAATCCTTGCAACTGTGTGTTCCCGATGACTCTGCGTCGCCCAAGCTCTTAAACATTCTGAGTTTATACCCTGTACTCCAGGTCTCTCCTGAATCTCAGTTTATCCTTTCTTTCCTGTTGACCATTTGGTGAAGATTTTTCTTTGTTGATGCAGTATTAGGAAATAACAGTTCTATCTGATGTCAGTTTATGTACTGAATGGAAAATTTTCAACATATATTGTGTCTATAATTATTGAGATAATTACATGTCATTTTTATTCTGTTACTGAGTATATTGATATGTTTTCATTTTTAAAACCAACACAAATTTCTGGAATAAACCACTATTATTATTCACAAGC EMBV3_33243 TCCGGCCCTGGCCTTTGAGGAGAAGTGTTCTACACTGCAGGAACTGGAGCTACCTCTGTT Gene GeneID:541097|ATXN7L2:NM_001102255:179_cdna Constitutive 0 NULL GeneID:541097 3 GENE ATXN7L2 MGC157119 ataxin 7-like 2 EMBV3_33052 AAGGAGACCTTCAACCTCTATTACTACGAGGCCGACTTCGACTCGGCCACCAAGACCTTC Gene GeneID:100336526|LOC100336526:XM_002685782:619_cdna Constitutive 0 NULL GeneID:100336526 2 GENE LOC100336526 NULL protein-tyrosine kinase-like EMBV3_37260 GACTTTAGCTACAAGCCTCCACAGCGTGGGCAGCTGCTATTTATTTTCCTAAAGAGAGTA Gene GeneID:531389|FOSL1:XM_002699351:238_cdna Constitutive 0 NULL GeneID:531389 29 GENE FOSL1 NULL FOS-like antigen 1 EMBV3_35263 TAGACCGTTTTGAGGAGGAAATACCCAGATTAAGGGCTGAGATGGAACAGCTGGAATTTC Gene GeneID:513202|LOC513202:XM_002692430:419_cdna Constitutive 1 NULL GeneID:513202 13 GENE LOC513202 NULL hypothetical LOC513202 EMBV3_04974 CCAACGTAGGTGTTGTGGCACTCCTGTGTTTCCTTCTTGTCCTCGCTTCTTATACTCGCA Gene GeneID:100299679|LOC100299679:XM_002699122:185_cdna Constitutive 0 NULL GeneID:100299679 29 GENE LOC100299679 NULL similar to odorant receptor MOR10 EMBV3_09627 CTGGTAAATATTTGGTACAGCTGAGGCTGCACTATAGGAACCAGTAGAAATGCTGACTGG Gene GeneID:533681|TMEM156:NM_001083469:32_cdna Constitutive 1 NULL GeneID:533681 6 GENE TMEM156 MGC140448 transmembrane protein 156 EMBV3_08110 AGAGAGGGAGTCGGTGAAACCCTAGGAATTTAGGGCTGTGTGGGTGGGGCCTAGGACAAA Gene BVT0102_426375 + 0 NULL GK000008.2:76348123-76352435 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228172 TCONS_00228174 TCONS_00228175 TCONS_00228173 TCONS_00228176 1 XLOC_138446 Coding TCONS_00228172 XLOC_138446 Coding Coding BAG1 8:76351049-76359544 j TSS170189 2707 2 TCONS_00228172_1 60 0.340229035833025 5 0.681893101012479 9.35110365954225e-140 0.000172837215583382 9.26787169765166e-46 4.22052450403649e-18 6.44785398957137e-228 1.11828627412251e-308 9.53295790347031e-05 1.36008218293493e-23 0.000552857784320408 1.166196848944e-08 0 2.85460905157992e-06 8.45670803587371e-25 3.8734539367953e-40 2.24052350470081e-23 0.00203143871297012 0.000148803493871819 0.00178968527651976 7.89972231547195e-05 7.88537406035417e-05 2.39499421263538e-28 0.00171114421805444 1.06979677154768e-22 2.32478396004171e-08 0.000482867994902044 4.69563376385953e-05 0.000744300996512301 0.000186640422537914 4.01018632036673e-05 0.000398597131457156 XM_005210348.1 BAG1 PREDICTED: Bos taurus BCL2-associated athanogene (BAG1), transcript 0.0 4558 100.00 0.933136313261914 NM_001172415.1 BAG1 Homo sapiens BCL2-associated athanogene (BAG1), transcript variant 0.0 1011 78.62 0.44218692279276 TCONS_00228172_1 sp|Q99933|BAG1_HUMAN BAG1_HUMAN BAG family molecular chaperone regulator 1; 3e-33 118 91.67 0.983333333333333 1 coding 0 0 0 0 0.0681393381089656 0.545254118507579 0.013194012217879 0.800119523194735 GGAGAGGAATTTGCAAGAGACTGTCAAACCTAACAGTCCGGAGGAAGAAGCTGAACTAAAGAAGCTGAAAGATTTGGAGAAATCTGTGGAGAAGATAGCTGACCAGCTGGAAGAACTGAATAAAGACCTTGCTGGAATCCAGCAGGGTTTTCTGGCCAAGGATTTGCAAGCTGAAGCTCTCTGCAAACTCGATAGGAGAGTAAAAGCTACAATTGAGCAGTTTATGAAGATCTTGGAGGAGATTGACACACTAATTCTGCCAGAAAATTTCAAAGACAGTAGAATGAAAAGGAAGGGTTTGGTGAAAAGGATTCAGGCCTTCCTAGCCGAGTGTGACACAGTGGAACAGAACATCTGCCAGGAGACAGAGCGACTGCAGTCCACAAACTTGGCCCTTGCTGACTGAGGTGAGGCGGAGAAGGCCGTGCTGCACTGAAGAACAGCCCCACCAGCCCTGCCATCTCTGGAACAGAAGTTACCTGCCTTCCCCAGCGCTGCTGGGAGCAATTGGCCCGTTGCCTTTTCCTTCTCTTACAACCCACTCTCAATGAACAAGTGTCATCCATACAATCTTTAGCCTCCTATCAGCTTCTCGTTCTGTCTCTGTGGATCTGTGCTGTCCAGCAGCCCACCTTGTCTGGAGAGTGCCCCCATGACCAAGTCTTCCCAGCTGCTTGGACCTTTGGGTGCTTTCTTTGGGCTGGTGAGAGCTCTTATGTATCCTGAGGTAGTTCTGAGTTTATTGGCCATTTTGGTCTTCAGATCCAAGAGGCCTTTTTGTTCTTATGATCCCATAAACCTGTCTGTGTAAACCAGAATCACCAGGAGTCCGTGTCTGGTGAGGAAAATCAGGAATGGGTCAAAACAGTAGCCCGAGTGTCTCTCATGTGATCTCTGAAACAGCTGGCTGGTTGTGGGTTCATGACCCTGTCCTCAGCTCCCAATGACCCTGATCAGCCATAGGTCGTGAGATCTCTGGTTCATTCCTGGAGTGGGGCCTGTGGTTGATATATGGACTGCCTTGCTCCCAAGCAAATCTCTAGAAGGTTAGAACCCAGAGTTGACTAAGTCTCTGCTTGCAACCAGGTCAGAACCCTGGCTTACGAGGGGCAGTGAGGGGGCCAGAGTGAATTCAGCAGGCAGGTAGCGAGGGCAACCATAAACCTCTCAGGAGTTCCTTCAAAGGCATTGTTAGGAGCCATCCCCTTCTGAGATCTACATTTTCTTCAAGTTACTTTGAGGTTGTTTCTGTCTGTTTTGTGGTCCTTTCCCCCTTCATTTGTTATTTAAAAAATAAAGCAGTTTATATACACATCAGCAAGCAAAAGAGTGTTAAAACTTTTTTTTTATTTGAATTTGCCATACAGCATGTGGGATCTTAGTTCCTGACCAGGGATCTAAGCCATGCTCCTGCATGGACTTGTAACCACTGGTCCACCAGGGAAATCCCAGAAGAGTGTTTAAACTTTTTTTTGTTGATGAAGTATGAGAAACAGAAGCCTTCTGAGGTTCTAGTATAGAAGTTTAGAGGTGGTCTGTGTACTTCAGTGGCCTCTTAAATGGGTCAGCTGATGTTACCCCCATTTTTTTCACACAGTGCCCAGGGGAAAAACTCCTAAAGGCCACTCTGAGGCCAGTCTTAGTCTGGCAGAGAGGGAGTCGGTGAAACCCTAGGAATTTAGGGCTGTGTGGGTGGGGCCTAGGACAAAGTGGTGGCAAGTGGACGAGGCTCAGGGGGTCCCATTGGCCCACCCCCAACTTTAATCAGAGTCATTCAGTATTTACCTGTTTATATGTAGTAGCTGTGTGGTCTTGGGCCACAGCAAGTTCCTATGTGCCAGATACCATTCTGAGTTCTTCAGGTGTGTTAGTCATTTAATCCTCACACAGTCCAGGAGGTAGACAGATACTCTGTTTTAGAGATGAACTTAGGTGATTTGCTCAGGATCATAGAGTAAGTGAAAAGCCAGGACACAAACTAGGTGGCTCGATTCCAAGCCAGTGTTCCTAATCTCTACTGATTTTTGTCCCAGCTGACATGGGGTTGCTCACACCTTCTCATTTTCTCTTCTCGTTCTATTTATCTCCTGTGTTGGTCTGTGTACTTCCTCTCTGGCCCTCTCCATTCTCCGTAAGAGCAGTTGAGTGATCATGATCATGATCTCGTCATGTCAGTCCTGTGCCTAAAAATCTCAGTGACCCCCATTCTCTTAGGATAAAGGCCAAGGTCCTTGCCCTTTTCATCTTGCTCCACTCTCCTGTTTATTCTGTGCCATCAGCCACTCTGGGCCAGTTCAGGTCCTCAGGTGCTCTGAGCCCTCTCGCCCTGGGGTCTTCGCACGCGCTCTTCTTCTGCTTGGACATTTCCCCACCATCCTTACCCTACCCCTGCCGCCATCCTAGGCGACTGCTGTTCATCCTTCAGAATGTAAATCTCTTCCATAGAAAAACCTCACCTACTGATGTCCCTGATAGTCAGTCTGAGAATGTCAATCCCCCAGGTGATGTCCTCTCACAGCTTGTGACTATTTTTATGATAAACAGCATTTATCATGGTCTATGATGATTTATTTGTGGGATTATTTGATTAATATTTGCCTTTTAACGCTAGTTCTTTGGATTAAGGAACTTCTTTGCTTTGTTAACAGTGTATTTCAGGCACTTTGTTAGGCTTATATTAGGTGCTCAATAAATATTTGGAGACTGA EMBV3_25473 AGTTGAGGGGTCAGGAGAATGGAAAACACAGAGCGGCTGTCTCAAAACTCCTTTTGGCTG Gene GeneID:520428|CDC14B:XM_002689832:29_cdna Constitutive 0 NULL GeneID:520428 8 GENE CDC14B NULL CDC14 cell division cycle 14 homolog B (S. cerevisiae) EMBV3_41405 TTTCTAAGTATCCTGTGGTGGACACTCCCTTTTCCTGGTCCTGTAACCTGGACTTGCTGC Gene GeneID:535578|EGLN3:NM_001101164:38_cdna Constitutive 0 NULL GeneID:535578 21 GENE EGLN3 NULL egl nine homolog 3 (C. elegans) EMBV3_41444 TCTTCCCGCCAGGCCATGCTAGAAAATGCCTCTGACATCAAGCTGGAGAAGTTCAGCATC Gene BVV0102_097587 - 0 NULL GK000023.2:28203253-28218613 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134671 TCONS_00134669 TCONS_00134670 1 XLOC_081480 Coding TCONS_00134669 XLOC_081480 Coding Coding ABCF1 23:28198591-28210958 j TSS100329 3024 1 TCONS_00134669_5 746 25 0.757480187611192 0.010668928729398 0.00839904790512086 0.00943178183859827 0.00842874753230605 0.00566313776305775 0.00282147787215878 0.00385395743607825 0.00574000505829023 0.00688282848312094 0.00530386813908745 0.00202425437975084 0.00189853391360106 0.0019017474655679 0.00493938624692291 0.00234534522989293 0.0323939597368004 0.0105566644334645 0.0185321192154693 0.00899657339888569 0.0080862174601688 0.00297898252768178 0.0152964039658001 0.0134123495957932 0.00905090254687611 0.0117112622523897 0.0079351305032574 0.00416392786044284 0.00384411672896587 0.00421134863814096 0.00841572141634075 NM_001206909.1 GCN20 Bos taurus ATP-binding cassette, sub-family F (GCN20), member 1 0.0 5416 100.00 0.992724867724868 XM_005248954.1 GCN20 PREDICTED: Homo sapiens ATP-binding cassette, sub-family F (GCN20), 0.0 3609 85.85 0.99239417989418 TCONS_00134669_5 sp|Q8NE71|ABCF1_HUMAN ABCF1_HUMAN ATP-binding cassette sub-family F member 1; 0.0 1262 96.00 0.998659517426273 10 coding 0 0 0 0 -0.147829466684281 0.387113928123224 -0.0127316210721653 0.831159030302576 AATTGACCTGCCGATCCAGGAGACAAAGTGGTGAAGAAAGGGAAGAAGGACAAGAAGACCAAAAAGACGTTCTTCGAGGAGCTGGCAGTAGAAGACAAACAGGCTGGGGAAGAAGAGAAAGTGCTCAAGGAGAAGGAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAAAAAGAAGCGAGACACCCGAAAAGGGAGGCGGAAAAAGGATGTGGATGATGATGGAGAGGAGAAGGAGCTCATGGAACGTCTTAAGAAGCTGTCAGTACCAGCCAGCGATGAGGAGGACGAGGTACCTGCCCCAGTACCCCGAGGAGGGAAGAAAACCAAGGGTGGTAATGTTTTTGCGGCCCTGATTCAGGATCAGAGTGAAGATGAGGAGGAAGAGGAGGAAAAACATCCTCCTAAGCCGGCCAAGCCAGAGAAGAATCGGATCAATAAGGCTGTATCTCAGGAACAACAGCCAGGGTTGAAGGGCAAAAAGACAAAGGAGGAGAAGTCAAAGGGGAAGGCCAAGCCTCAAAATAAATTTGCTGCTCTGGAGAGTGAAGAGGAGGAGGAGGATGAAGAGGAAGTAACAAAAGAAAAGGAACCGCCCAAGCAAGGGAAGGAGAAGGCCAAGAAGGCAGAGCAGGGCTCAGAGGAAGGAGAAGAGGAGGAGGAAGAAGGGGAGTCCAAAGCTGATGACCCCTATGCTCACCTTAGCAAGAAGGAGAAGAAGAAACTCAAGAAACAAATGGAGTATGAGCGCCAGGTGGCTTCGTTAAAAGCAGCCAATGCTGCTGAAAATGACTTCTCTGTGTCACAAGCAGAGGTGTCTTCCCGCCAGGCCATGCTAGAAAATGCCTCTGACATCAAGCTGGAGAAGTTCAGCATCTCGGCCCACGGCAAGGAGCTGTTCGTCAATGCAGACCTGTACATCGTCGCCGGCCGCCGCTACGGGCTGGTGGGACCCAATGGCAAGGGCAAGACCACTCTCCTCAAGCACATCGCCAACCGAGCCCTGAGCATCCCTCCCAACATCGACGTGCTGCTGTGCGAGCAGGAGGTGGTAGCTGACGAGACGCCAGCCGTGCAGGCTGTCCTTCGAGCGGACACCAAGCGCTTGAAGCTGCTGGAAGAGGAGCGGCGGCTTCAGGGACAGCTGGAGCAGGGCGACGACACGGCTGCTGAGAGGCTCGAGAAGGTGTACGAGGAATTGCGGGCCACCGGGGCGGCAGCTGCAGAGGCCAAAGCCCGCCGGATCCTGGCTGGCCTGGGCTTTGACCCTGAGATGCAAAATCGACCCACACAGAAGTTCTCGGGGGGCTGGCGCATGCGTGTCTCCTTGGCCAGGGCACTGTTCATGGAGCCCACGCTGCTGATGTTGGACGAGCCCACCAACCACCTGGACCTCAACGCTGTCATCTGGCTCAACAACTACCTCCAGGGCTGGCGGAAGACGCTGCTTATCGTCTCCCACGACCAGGGCTTCCTGGATGACGTGTGTACTGACATCATCCATCTTGACGCCCAGCGGCTTCACTACTACAGGGGCAATTACATGACCTTCAAGAAGATGTACCAGCAAAAGCAGAAGGAACTGCTGAAGCAATATGAGAAGCAGGAGAAAAAGCTGAAGGAGCTAAAGGCGGGTGGCAAGTCCACTAAGCAGGCGGAGAAGCAAACCAAGGAAGCCTTGACTCGAAAGCAGCAGAAGTGCCGGCGGAAAAACCAGGATGAGGAGTCGCAGGAGGCCCCCGAGCTGCTGAAGCGCCCCAAGGAGTACACCGTGCGCTTCACGTTCCCCGACCCGCCGCCGCTCAGCCCTCCGGTGCTGGGCCTGCACGGTGTGACCTTTGGCTATGAGGGGCAGAAACCACTCTTTAAGAATCTGGATTTTGGCATTGACATGGACTCAAGGATCTGCATCGTGGGCCCTAACGGCGTGGGGAAGAGCACCCTGCTGCTGCTGCTGACAGGCAAGCTGACGCCGACTCGGGGTGAAATGAGGAAGAACCACCGGCTGAAAATTGGCTTCTTCAACCAGCAGTATGCAGAGCAGCTGCGCATGGAGGAGACGCCCACCGAGTACCTGCAGCGGGGCTTCAACCTGCCCTACCAGGATGCGCGAAAGTGTCTGGGCCGCTTCGGCCTGGAGAGCCACGCCCACACCATCCAGATCTGCAAGCTCTCTGGTGGACAGAAAGCCCGAGTTGTGTTTGCAGAGCTGGCCTGTCGGGAGCCCGATGTCCTCATCTTGGACGAGCCCACCAATAACCTGGACATCGAGTCTATCGACGCTCTAGGGGAGGCCATCAACGAATACAAGGGTGCTGTGATCGTCGTCAGCCACGATGCCCGACTCATCACAGAAACCAACTGCCAGCTGTGGGTGGTGGAGGAGCAGAGTGTTAGCCAGATTGACGGTGACTTCGAAGACTACAAGCGGGAGGTGTTGGAGGCCCTGGGAGAAGTCATGGTCAGCCGGCCCCGAGAGTGAGCTTTCCTTCCTGGACATCCCCTGTCTCCTCTCCACTCGGAAGCTTGCTCTGGTCTGCAGCCGGAGTGGCAGCTGCTCGGGCGTGTGAAAGTGGAGTGTGGTCTTGATGTGACCAGGATATTTGATTGCTTCTTTTTCTCTGAATGACTCGTCCGTTCTGCTTCTCTTGAGATAACTGAGTGGTCCTTGTCCTTGAAGTCCCTCTGTACAGGCAGAGGTGACATTTGTCATCATGGGGTTCCATCCAGCCAGCTCACGCAGCCAGTTGTCTGAGCCTCTGTCCTCACCGGGAAGCCTGCCTCTGGGCCGCCCCAAGCTTCGGGTGCAGCTGCCGTGTGGTCTGAGTGGTGCTGCACTCCTCCGGTGGATTCAGTGCTGACCTAACGGATACCAACAGCTGCTGCTGCTCCTGCCACCCAGGATCTGGTGCCTGCAGTATCTGGTCTGATGGGGGACTTGGGGACAGGAAAGGAATGCTGCTGAACTTGAATCACCCTTTACAAGGGGAAGAAATAAAGGAAAGGAGTTGCCGCCGCC EMBV3_23335 CCTGGATGAACTTCTGGGCCAACCCAAGTTTTCTACTTTTGTTTAACTTTATGACTTGCC Gene GeneID:505968|ACADM:NM_001075235:20_cdna Constitutive 2 NULL GeneID:505968 3 GENE ACADM MGC128274 acyl-coenzyme A dehydrogenase, C-4 to C-12 straight chain EMBV3_12757 CATGGGCTACATGCACTGCTGCCTCAACCCACTGCTCTATGCCTTTGTGGGTGTCAAGTT Gene GeneID:497018|CXCR3:NM_001011673:47_cdna Constitutive 0 NULL GeneID:497018 X GENE CXCR3 NULL chemokine (C-X-C motif) receptor 3 EMBV3_39963 CACCGTGAACTCCTGCTGTATCCCCACCAAGCTGAGCACCATGTCCATGCTCTACTTCGA Gene GeneID:530430|INHBB:NM_176852:17_cdna Constitutive 0 NULL GeneID:530430 2 GENE INHBB NULL inhibin, beta B EMBV3_14076 AGGGTTGATCTGTTTTCACTTGTGAAGGGAGCAGGGGTCTGTTGTTCAGGACCCCAGAAT Gene GeneID:516199|CTDSP1:XM_002685570:147_cdna Constitutive 0 NULL GeneID:516199 2 GENE CTDSP1 NULL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 EMBV3_26295 CCTCGAGCCGCTGGACGAGGATCTCTTCAGGGACCCGGAGCTCCAGGAGAGGTACCGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25256 CAGCTTCCTTAGCTGGCATAATTGCCGAATCATTTGTTGCTCCTGCTGCTCATGGTGCCA Gene GeneID:522529|ADSS:NM_001167809:59_cdna Constitutive 3 NULL GeneID:522529 16 GENE ADSS ADSS2 AMPASE2 adenylosuccinate synthase EMBV3_07724 CATTGTGTTGTTTCTTTGCTGTGCAGAAGCTTTTGAGTAGTCCCACTGGTTGACTTTGCC Gene BVV0102_359807 + 0 NULL GK000030.2:46308194-46618112 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07652 TTTGAAGGGGCTGTCATAGGTCTGGCCTTGGTTTTTGCTTGCCTTGTCATCGTTCGTCAG Gene GeneID:513970|JTB:NM_001100360:138_cdna Constitutive 0 NULL GeneID:513970 3 GENE JTB NULL jumping translocation breakpoint EMBV3_42927 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10104 TCCCCTGTGGGGACCAAAGTAAGTTCCCTAAGGTTTTCAGGTCCTGGCTGTAGTTTGGAG Gene GeneID:529049|MRC2:XM_002696089:132_cdna Constitutive 0 NULL GeneID:529049 19 GENE MRC2 NULL mannose receptor, C type 2 EMBV3_15700 AGTCAAGGGGCCAGTCAAGGAGCAACTGCCCAAAAGTCCAAAAGCCAGCAAGTTGTAGCA Gene BVT0102_112089 + 0 NULL GK000002.2:126541835-126560334 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00879 AAAAGGTGTTAGCTACTGGCGGGTGCCTCACGAGCTGATAGAATGCTGGACTCTGGAAGA Gene GeneID:613694|KCTD18:NM_001046514:134_cdna UTR3_Alt 2 NULL GeneID:613694 2 GENE KCTD18 MGC137502 potassium channel tetramerisation domain containing 18 EMBV3_36119 TGCCTTTCGGAACCACCCCCAGTTGTCTCCCATGATTAGAGGCCAAGATGCAGAGATGTT Gene GeneID:100336013|LOC100336013:XM_002687888:77_cdna Constitutive 0 NULL GeneID:100336013 5 GENE LOC100336013 NULL testis-specific Y-encoded-like protein 1-like EMBV3_34958 AAGGTGCACGGCGGTAACACCAACAAGTACAGCACCTTCTCTGGCTTCATCATCTACCCA Gene GeneID:616876|LOC616876:XM_002687303:233_cdna Constitutive 0 NULL GeneID:616876 5 GENE LOC616876 NULL similar to complement component 1, q subcomponent-like 4 (predicted) EMBV3_01517 TCCCCTGAGGAACAAGGCCAGTAAGCGTAAAACTCCTGTGGTGAAGAAGACTCTGAATCC Gene GeneID:515978|SYTL4:XM_002699813:35_cdna Constitutive 0 NULL GeneID:515978 X GENE SYTL4 NULL synaptotagmin-like 4 EMBV3_39851 GGAGTGTGATTACTGGCTTGATTGCCCTTTCCCCTGTTTGACTCTCGTTTTTCTCCCTAG Gene BVV0101_026856 + 1 EMBV3_36766 GK000030.2:66949674-67800434 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08299 ATCTGAATGACTGTCTCACATTGATGTACTCCTCATTTGGCGGTGGGTCGGGGGAAGTTG Gene BVV0102_043283 + 0 NULL GK000019.2:23067070-23086295 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34101 GGTGGGGGTACCAAGGACAATGGTGGGATACCCTCTTTTAACCCACTCCAGAAGGACTTT Gene GeneID:540305|S1PR2:NM_001081541:90_cdna Constitutive 0 NULL GeneID:540305 7 GENE S1PR2 EDG5 MGC155267 sphingosine-1-phosphate receptor 2 EMBV3_42297 AGATGAGCCACCTTTGACCCCAGACAGAGACGATAGGGCATTCTACTTTGTGCCTCCTGA Gene BVV0102_304729 + 0 NULL GK000019.2:54459556-54537794 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094533 1 XLOC_057475 Coding TCONS_00094533 XLOC_057475 Coding Coding SOCS3 19:54458146-54461379 o TSS70689 2655 2 TCONS_00094533_1 229 2 0.17914603960396 0.00302349448719899 0.00194912176893856 0.00230042093873116 0.0011729012684855 0.00183448110301258 0.000617059096364081 0.00127616727871973 0.00142207547658432 0.00137286848642058 0.00163233404973133 0.000374201175791187 0.000262416712166574 0.000449617667836312 0.00123756954393075 0.000335847795758551 0.00201941717752527 0.00330169052414935 0.00363841751049682 0.00231449689134489 0.00299846802601403 0.00173339380015689 0.000293471876369035 0.00308772189619882 0.00140178836290944 0.00344259418614581 0.00318305793196141 0.00163747687095028 0.000796813255031853 0.000140792575277924 0.00054914632753074 XM_005221139.1 SOCS3 PREDICTED: Bos taurus suppressor of cytokine signaling 3 (SOCS3), 0.0 4525 100.00 0.944632768361582 NM_003955.4 SOCS3 Homo sapiens suppressor of cytokine signaling 3 (SOCS3), mRNA. 0.0 2156 79.03 0.945386064030132 TCONS_00094533_1 sp|Q9BEG9|SOCS3_BOVIN SOCS3_BOVIN Suppressor of cytokine signaling 3; 9e-169 469 100.00 0.995633187772926 2 coding 0 0 0 0 -0.0214909251313498 0.88445394567097 0.025422548835532 0.680306819016475 NNACCGTAGGAGGCGCAGCCCCGAAGCCAAAGACTTCGGTTTGGGACCAGCCCCCCGGGATGCGGTAGCGGCCGCTGTGCGGAGGCCGCCGAACAGCTGCAGCCGCCGCCGCCGCGCAGATCCACGCTGGCTCCGTGCGCCATGGTCACCCACAGCAAGTTTCCCGCCGCCGGGATGAGCCGCCCCCTGGACACCAGCCTGCGCCTCAAGACCTTCAGCTCCAAGAGCGAGTACCAGCTGGTGGTGAACGCAGTGCGCAAGCTGCAGGAGAGCGGCTTTTACTGGAGCACCGTGACGGGCGGCGAAGCGAACTTGCTGCTGAGCGCCGAGCCCGCGGGCACCTTCCTCATCCGCGACAGCTCGGACCAGCGCCACTTTTTCACCCTCAGCGTCAAGACCCAGTCGGGGACCAAGAACCTGCGCATCCAGTGCGAGGGGGGCAGCTTCTCTCTCCAGAGCGACCCCCGGAGCACGCAGCCCGTGCCCCGCTTCGACTGCGTGCTCAAGCTGGTGCATCACTACATGCCCGCCGCCGGCGCCCCCTCGTTCTCCCAGCCCCCCGCTGAACCCTCCTCCTCGCCCTCCTCCGAGGTGCCCGAGCAGCCACCGGCCCAGCCGCTCTCCGGGAACCCCCCCAGGAGAGCCTATTACATCTACTCGGGGGGCGAGAAGATCCCTCTGGTGTTGAGCCGGCCCCTCTCCTCCAACGTGGCCACTCTCCAACATCTCTGTCGGAAGACCGTCAACGGCCACCTGGACTCCTACGAGAAAGTCACCCAGCTGCCTGGGCCCATTCGGGAGTTCCTGGACCAGTACGATGCCCCGCTTTAGGGAGCAAAGGGGGCAGGAGTTGGGCGAGGGGGCCCGGGTCCCCTCTCCTCCGTGGCACATGGCACAAGCACAAGAATCCAGCCGCGCGAGTCCTGCAGCTCCCGGGTGAGCCAGGGCGCGGGGAGCCCCCTCCCGCCGGTCCTCCCCCCGCAGAACAGGGCCGGCGGCACCTGGAATGTGTTTGAGGGGAGACGGAGAGCCACCGGAGCGCACCTCCCCGACTCCAGCGTCTCCGGAGGAGCCAGCTGGCCCAGGGGGACCACAGCTAGGACCGCAGTGGATGCTCTGTCCGCTCCCGCCTCCTCCACCCCGCTGCGCTTCCAAACGGGGGACACCGCGGGGCGTGTTGAACTGTGAGAACTGCCGGGAATCTTTGAACTTTCCAACGGAACTTGTTTGTTCTTTGATTTGGTTTAAAACAGAGCTTTAAACCTCAGCGGGTTGAGAGCCTGGAAAAGGGTGGAGGGGAGAGAGAGAGAGAGAGAGAGGGTGCCTCCGGGGCCCAGGGCTGCAGGCTGGCCAAGAAAACGGTCACTCCCACTGCTCGGCTCAGGTCAGGAGGGGCGGCTGCCTGCTCCACCTCTGGCTCTGGGGAGAAGGGTGACCTGAAGGGGACCTTTCTGTTCCCCCTCTTCCTGCCCCTCAGATGGCCACCAGAAACACAGGTCCTAGAGTCCGTCTAGTGCCCAGGAGCCCAGGGCCCTTCTCCCTTTTTAAGGGGGGAGTGGCATTGGGGGCGCGGAATGGATGGGCTGGTCGGTAGTTCTGAGCCCACCCCTGCTCTACCTTTCAGCACCTGGGGAGGGGGGGTGGGGCTGGAGGAGATGAGCCACCTTTGACCCCAGACAGAGACGATAGGGCATTCTACTTTGTGCCTCCTGACTAGATCTGGCTAGGAGATTTGCCTTAAATGCTCCCTGTCCCATGGATAGGGACTGGCACACAAGAAGCCACACACTCAGCCAACCCCAGCAGAGGCCGAAGGATTCTCAGAGGGGCGCCCAGCGGCCACTCACCATTTGGTGGTGGAGGTCGGAGATGGATTGGTGGGGAGGGGGCAGAGATCCACCTGCTTTCCAGCTGAGCCCAGGAAGAATGCCAGCCAGCCCAGTGGATACTGGCCACCAGTGGGACCTGGGCTCTGGTCCGAGGCAGAGCCACTGGGTCCTCCAGCCCCCAGCCCCTGCACAGACAGCCCTCCCTCCTCACTTTGGGGGACTGGCACTGGCAGGAAGTCATCAAGAGGCTCTGCCACCCAGCTGCTCCCGCTCTGCAATAGCACTGATCAGTGAAAACTCAGAGGAATGTAGCAGCGATGGAATTACCTGGAACTGTTCTTTTTTTGGGGAAAACCAAACACACACAAGTTTTCTGTGTCAGGTATTGGGCTGGATGGGTCAGCTGTGTGTTGGGGTGGTTTTTTTTTTTTCCTTGTTATTTTGTTTGGATTTTGTTTTTGTTTTTTAATAATGTTTACAATCTGCCTCAATCACTCTGTCTTTTATAAAGATTCCACCTCCAGTCCTCTCCCCTCCCCCTACCCAGGCCTTCAAGGCTGATAGGAGATGCTTGAAGAACTCAACAAAAATAACAATCCAAATCAAACTTTGCACATATTTATATTTATATTCAAAAAAGAAACATTTCAGTAATTTATAATAAAGAGCACTATTTTTTAATGAAAAACCTGACTGGAGCCTTTCTCCCACCCCCCACCGCCCCTCTGGACTTGCTTTCTCTTTCACCCACACCCACACGCTACATCAGAGGGTGGCGGCCCTACCCCCTCACTGCCCTGGTGCTTCTCGTGATGGAATCAAACTC TCONS_00094534 s 5' 0 TCONS_00094534 s 5' 709 EMBV3_20050 AGGACTGGAAGAACATAGCCAAGATGCCAGCCCAGCTCTGGTGGGGCCCGGCCCCTAATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08306 CAGCGCTTGAGGATCAACATCAGACAAAAACTGTCACTTCTACAAGAGGGTAACTGGTGC Gene BVV0102_063557 + 0 NULL GK000004.2:104856530-104876171 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185182 TCONS_00182647 TCONS_00182646 TCONS_00185183 2 XLOC_111510 XLOC_110917 Coding TCONS_00182647 XLOC_110917 NonCoding NonCoding - 4:104859601-104866139 - TSS136445 3475 2 TCONS_00182647_1 76 2 0.468716536637601 5.78804013625455e-15 0.000297838892952529 0.00016568881693016 4.06246917903106e-05 1.58586198757066e-152 0.000175529918502666 4.1954725741113e-05 2.03420313387065e-66 0.000142155824762446 7.5601034303407e-125 1.00898759483454e-05 0 3.59307377077662e-145 2.80698549545732e-29 2.81441180817155e-134 0.00289672574491145 0.00164176728464881 0.00410118975047657 0.000424408328802476 2.67290843618307e-05 0 0.000723905228736489 0.000433498638866908 0.00199112218823918 0.000212019251804162 7.27967834400141e-05 0.000391171547507382 9.75196234991317e-05 0.000104221238923026 0.000113998932138371 XM_005205910.1 BRAF PREDICTED: Bos taurus v-raf murine sarcoma viral oncogene homolog B (BRAF), transcript variant X3, mRNA. 0.0 2922 100.00 0.46589928057554 XM_005250045.1 BRAF PREDICTED: Homo sapiens v-raf murine sarcoma viral oncogene homolog B (BRAF), transcript variant X1, mRNA. 0.0 1689 73.99 0.793669064748201 0 noncoding 0 0 0 0 0.0382967501610053 0.732198945489474 -0.0828262148443175 0.308881479745041 CTAGATGAGGTCAGGCAGTGAGAAAGCTTCTCACAAGTTTTAAGCAGGGGATGGTCCAATTTGAGTTCCTAGTTCCTAGGCTTTCACTCGCCCTTTGTTCTCCCCAGTGGTCAGAATGGGCCCAATGGCAGCAAAAGCAGAAGCAAGTGAAACAGTTTTTCACCCTCCCCACCGTTGCCTCCAGCAGTCCTGAGCCTGATGCACAGGTGTTGGACACTCCTGGTTTTGTGTTTACTCACCTGTGTAGGAGTGTGCTGTCTCACCTGTCTGTGTTCCTATAGAAAATATATCTTTGGAAGTTGTGTCAAAAAAAAGTCTGAAAGATACCATTCACAGTTCAGAAGATGGAACTTCTCCAGACTACTACTTATACGACTCAATTACAGCACACCCTTCGCCTGAGCCCCTGGAAGGGGGACAGTCACATCACACCATCACACAGCGCTTGAGGATCAACATCAGACAAAAACTGTCACTTCTACAAGAGGGTAACTGGTGCGATGTACCAAGTATCTATCTTGACAACTTACTTTAAATGTATTTCTCATATAAATACCTTTTGCCCACCAAGCAGTAATTGAAATCTATGTAAAATTTCACTATATATGAAACAGTGTACACTTCTCAAGTCCCTCCACTGCCTGAAAGAACTGTCAGAACCCTCCTTCCGTTACTGAATGTGACAGTGCTAGGAAAATAACTGTCCTGATAAAGCCTTCTCCATGCAGTCAATCTTTATTATAGCAGTATTCGCATATTCACATCAAGTACATAGAACTTTTTTTGCCTTTTATATAGTACAGAGTTTTTAAATAACTTTACACAAATAAATTTCAATCTGAATTTCAGCTATCTTTTTTATTTAATTCTCCATGCGTTCTATCCAAACTGAACAATATTTTCCATTGTACAAATTTACATGAGAAAAAACTCCAAAGTACAAATGAAAGGACCTGAGCAGGAAAGAGAACTCAAGAAGTATCAAGAAGTGGGGATGGGAGAAAATCAGAAAAAAAAAAAAGATTCAAGCAAACATTGAGGATTAAGGGACAAGGAGACATCATCTGACTGAAAATAAATGTCTTTTTTATGAATTGAAAAATAAGCTTTAAAAATAGTTACTCCTTTGTAATTTTTGCAAAGCAGGAACAGAAAGGTCTGTGGACAATTAAAAACCATCTTTTCACTGGGCACTCTCCAGACTCCATGAAAACTTTTTCAGTGCTTGAGCAGAACTGAACAAAACCCAAACCTCTGGCAGCAAGAGAGGAGAGGAATGTGAATGTGAATCACCATAATGTTTGGTGTAAACCAGGGCCATTAACTTGCTGCAGTTAAAACATGAAGGAGTTCCCTTTCCTCTCTCTTACAGAATTGTCCTCAAAGTAAGAAATAAGTGAAAAGGTGGGGAGGTGGGATTTCGTTTTTCTTGGTCCAAACCAAAGAGCAATCAATCATAACTAATAAATAGAATTCAAAGGGACATATGTCAAACAATTAATTGCAATCTCATGGTTGTACACTCCTGTTTTAGAAGACACAGTAATTGCTGAGCAAGGAAAAGGGTTAGAGTGTGTACAACCAATGAACGAGCTACGTCACTGTGATAGTCCTTCAGATCAGGTGACAGGAAGGCCAAGCTGAGACTATGAGCTGTGGCATGGCCTAAGGAAACAGAGAGGATCCAACAAACGCGTTTTTAAACGAAGGAGGGAAAATTTATAGCATACACACACACACACATCCCTGTATGTAAACTAACATAACATGAAGATAAATAAGACGTAAAGGTTAGCCATTTATATTGGTAATTAACATGAATAAAAAGGCATATGTTTATATAGCTGGTTTTAATCAGCTATGGAACATAGGCAAATGCATTGGGAAGGAATGCTTTTTTTAAAAAACCCATTCACAGCTTAGAATAAAAAGCACACTTATTGCACTCTTACATTTTATTTCAGGTAATTACAGTTTATTTCCCACCCTCACATCAATTTTTCCCTACCCCTAGACTTATTCCCATACCTTCCCCCATCCCATTTTGGTCCATTCTGTGTACATCTGTGCCTAGTCTGAGCTTTGTTATTATGCTAGTCTGAGGTTTCTTCCTATGTGACATATACTGTCAAAACACAAGTAGGTTAACACAAATATAACACAATAATTTTCAAAACAAAGCCAACTGACTAAGCAACTTACTCATAACTCTCATCTCCATTCCTGTAAACAGAACACTTCCTCTGCTCTATCTCTTAAGTGAATTTCACGCCCGATTCCCTACGTAGATTCTGCGATGAGAACCAGCCACTTGTGGGTGATGGACAATGTGCTCAGCCTGCCAGAAGAAGCAGATGGTCTGCAAATAGCTTTTTTTTTTTTCCATATTAACACGAATAAACGTATTTTAGTTGTTTTCAATGAGTACTTCATAAATCTACAGAAGTCTTAAGAAAAAAAGCATCACAAAAAAAACCCAGATATACTCACTGGCTGTGTCCTCATGCACAACTGGCTATATTAATCATTGCAATTAGTCAAAACTGCTAAATAAACATTTTAATGAAACTGACTTAGTAATTAATAAAACTACATTGACACTTAGGTAAAGGGGGGTCAAAAGGTTAAAAAAAAAATGTATTACAAAAACAACAGCCGAACTTGTGAATGCTGAAATAAAAGATTCACTCACTTTTTTTGAGGTAGAGACTAACCACCCCTAAACATTTTAAAATAAACCACGGTTACCTTAAGCTTTTAGAACTTATGTTTCTATCCTCTTCTACCTTAAAAATACCTGATAGAAACTGCTAATTACCATGACTGGCAAAATTTAGGACTGAAACTCAATTTAAATGTCTTTCCAAATGGAAGTGAAAACATTATCTAAAAACAACAAAACAAAGCTTACTCTCTAGTGTACTGATAAAACAAAAATCTTACCAGTATTTTCAGTTTACCAGAGCTAGCAACATGGAACATGAGTACACTGGCCACTTCATTCTCTTCGGGCCAATATACAATCATGCAGAGATGCTATTGCACTCCTCGGGTGCTCAACAACCCATGGCTGTTAGTAACACACCTTAGTGGAGACGTCTAGAGAACCCGCTGAAGCCTTTCTTGAGGGTGGCGAGGGACCGATACAAGAAGCACACCATGGAGTGTGTCCGGTTCACATCCGCCCGCCAGGTCGTTAGCTAGTCTGATGTCCCCTCAGAGAGGAGCCCCTGGAGGCCCCACCTGGCCCTCAGAGCATTTTTGAACAGCATAAGCAGGACAGTCCCACTAACTTTGCAAAACAGTTGCTGAGCTGCAAGTTTACGTTTCAGCCTCTGGAAACTCAGTGTCTAGGTTGGCAGCAGTAATCTGGGAACAAGAAAATCAAATTCTGTCCTATATCTTAATTTCTCCTTTCTCACTAGTTAATACATGTGATTGCTGCCCAGCACACAGTACTTCAGCCCCAAACTAC TCONS_00185184 r 5' 0 TCONS_00182643 TCONS_00182644 TCONS_00182642 s 3' 800 EMBV3_25979 CTCATAAGCCCTTAGAGGCAGATCTGAACAAGCATACATAGAAGAGGGAAAGGAGAGAGT Gene GeneID:616537|RAB6A:XM_002693454:33_cdna Constitutive 2 NULL GeneID:616537 15 GENE RAB6A NULL RAB6A, member RAS oncogene family EMBV3_04568 CCTGGCAGAACTGAGTGGCTGTTAGGGTCTTAGGGTGCACAAGGCCTAAGTTATTATAAT Gene GeneID:615008|LOC615008:XM_002688056:7_cdna UTR3_Alt 1 NULL GeneID:615008 6 GENE LOC615008 NULL similar to HCV F-transactivated protein 1 EMBV3_06134 CTTTGACATGGACTTGTGCTGGGGATTGGTCAGACTTTCCAGGAGACTCTTCTGCTTCAG Gene GeneID:616216|OOSP1:NR_024196:22_cdna Constitutive 1 NULL GeneID:616216 15 GENE OOSP1 NULL oocyte-secreted protein 1 EMBV3_23299 TTCCAGATAAGCAAGAAGTAAGAATTCATCACCAGCAGACCTGCCTACAAGGAGGAGTCC Gene BVT0102_110324 + 0 NULL GK000025.2:28781368-28894400 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145101 TCONS_00145098 TCONS_00145097 TCONS_00145102 TCONS_00145100 TCONS_00145103 1 XLOC_088732 Coding TCONS_00145103 XLOC_088732 Coding Coding TYW1 25:28699690-28783857 j TSS108813 4236 1 TCONS_00145103_2 202 0.309254013220019 5 0.949730294893425 0.00580402307873327 0.00381893925752498 0.00194245214890759 0.00223992955602306 0.00204919973137861 0.00146384374578612 0.00204587347600558 0.00303476624206568 0.00418577260072802 0.000357206882268201 2.79106754568116e-05 3.24476461255314e-11 0.000749459692178706 0.000989199706370154 0.000595808265319958 2.87825424159744e-07 1.7790669847204e-07 2.41354975310454e-07 0.00388492549005895 0.0050983531066333 0.00242239676893615 8.46835511182352e-08 9.04810587696115e-09 1.348376019805e-08 0.0041146399245554 0.00386814095864033 0.00351647825474015 3.29737839599492e-10 6.03260291556164e-05 4.68314520778539e-08 NM_001192753.1 TYW1 Bos taurus tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) (TYW1), mRNA. 0.0 1254 98.75 0.169499527856468 NM_001145441.1 TYW1B Homo sapiens tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae) (TYW1B), transcript variant 2, mRNA. 1e-158 565 89.44 0.100330500472144 TCONS_00145103_2 sp|Q8BJM7|TYW1_MOUSE TYW1_MOUSE tRNA wybutosine-synthesizing protein 1 homolog; 5e-110 335 66.80 0.995049504950495 1 coding 0 0 0 0 0.521000807886719 0.173443254712456 -0.0146001212658486 0.781032416669926 GTTGTGAAGATCCCCTAGAGAAGGGAAAGTTTGTGTCTGCTCTCTTAGTGCAGTAGGCAGCATGTCAGTCTCATAATCTGAAGGTCCTGAGTTTGAACCTCAGACAGGGCAGATCATTCTTTTTGGGATTCCCTGGTGGCTCAGACGGGGTGCCAGGCGTCAAAGAAGAACGCTTTGAAGAAGGAATGACAGTAAAGCACTGTGCGTTGTCTCTCGTGGGAGAACCCATCATGTACCCAGAAATCAACAAGTTTTTGAAGCTACTTCATGAGTGTAAAATCTCCAGTTTCCTGGTCACAAATGCACAGTTCCCTGCGGAAATCAGGGACCTCAAACCAGTTACCCAGCTCTACGTCAGTGTGGACGCTAGCACCAAAGACAGCCTGAAGAAAATCGACCGCCCGCTCTTCAGGGATTTCTGGCAAAGATTCCTTGATAGTTTAAAAGCCTTGGCTGCAAAGCAACAACGTACTGTCTACAGACTGACTCTAGTGAAGGCATGGAACGTGGATGAGCTCCAGGCCTATGCCGAGCTGGTGTCCCTGGGGAATCCTGACTTCATCGAGGTGAAGTTTAAGATTGGCAGAGAATGGTGGACGTGGATCGATTACAGCCGCTTCCAGGAGCTCATTCAGGAATATGAAGATAGTGGCGGATCAAAAACTTTCAGCGCAAAGGATTATATGGCCAAAACTCCTCACTGGGCCTTGTTTGGTGCCAACGAAAGAGGCTTTGATCCCAAGGATACCAGATATCAGAGAAAGAATAAATCAAAGGATATTTCTGGATGTTGAGATTGTCTGGATTTAGGATACCGAAGGACACAAACCGATGGCTGCAGAAGGTTCTCAGACTCCACTGTGATTTTTTTCCAAGGACAGGTTATACAAATAATATTTCACATAGAGAAGGGTGTGAGGAAGAACATGAGGCCACAAGTCATGTCCCAGGGCTCAGGAGAGAGCAGCCACACTGGAGTGCCTGGGACTTGGCCTCACCATCTCTTTCCAGCACTCAGTCCCTTTTCTGAATTTACTTCTGAAAGAAAATCATCTTGAGGGGGAAGTCCATAAGCATGATTAGTTTTGAATTACAACTAGGAAGACTCACTGGAACGCCATCCATGGGAGTGTTGTACAGTGTGAATTTCTGTTTCTCTTCCCTCACTGTGGCTATTGGTCTTCTGTCGATTGTACTTCCTTGAGATCCACGTGTCTGCTCACCGTAAGCTCTCCATCCCTTTCTTACGTCTGAAGATAACACCTCCTGAAAATAATTTAAATTGTCATTATTCTCAATTATTTTAAATACCACATAGATTTCTTTAAATTTTTGCTTAGTTCCAACCCTTAAGAAATTGAATTAGATCTAGAACTGTACTCGATTTCATTGTTCCCATACAAATTGCCATAGAAGGTAGCATGTAAGCTAGAGTAGAATAAAATCTTCTGTAAGAGGCATTGTCATAGGATGTCACTGAATAATTAGTCTCACACACTGTGAAACAGTGAGTACAGTTTGCTTTTGCTTTGAAAAGTCAGCATGTAAACTCATCGCTACACTTGTAGGTTTCCATCTTCTTTCACTCTGGTGCCCTAGCTGCTTTCTGCCATGTGTTTTTTAAGGCTCAATTTTTTTTCTAGTTGAAAATATCACTAAACACTCAGTACTTTTTTTTACAAGTATTAGTTATTTTAAAAATTCCTTTATCCTAAAAATCTAATAAATTATCTTTTGTAAAGACTTGGACCACACATTTTCTTTTGAGAGCTTATTTTAAAGATGCTTCTAGTCCTGTGTCTCTAAGCCCCATCAGACCCAACCCCCGCCCCCCATATTCTCTGCTGAAGTTAATAATGATATAATCTACCTACTCATTTGTTGAAAACCGGGCCCTGCATTTATATCTGAGTGATAGAGTCAAAACATGTCTCTCTGTTGTGCCATACGGTGAAATGTGATGTCCTTCTTCAGCCCACCACAGCTTCACATCCCATGTGCTGTTAACTCCTGAGACAGACAAGGGACGGGAGTGATCCAGGCCAGCGAGGCAAGATCTCAGTGGAGCTCGGATGTATTAGTGGTCCTTGAACAGAGATGGAAAATCACCATGAAGTCGAACAGTGCTGTATGGTAAGAGCTCACGCTGTGGAGCACACAGATGGGCTGCTGTTCGTGAAGTTAACCGAGCACACAGCTATTGGAAACACTTGCTGCTGTGAGGAGCAGGGCAGGTGCCAGTGCCTGTTTGACTTTGGACTGTCCCTCAGCCTCCTTTTCAACCGGGCACCTCTGCTTTTACTTTTCATGCATTGAGGTTCTGCTCACAATTTAATTTGAATGAAAATATTCTGTTGCTTCAAAGGAAAAACACACAACGAACCTTTCACCTCCCGAATGAACCCTCCTGATGCCATTAGCTTCAAGTGCATAAATGAGCAGTTTTTCTCCCCCTGCCATCCAGGAAGTGTTTGCTTTATATTTTTAAAAATAGCATGGCATATTAATCCTGGTTCACAGACACAGCAGAAAAATTTAAATGCCTTGGGGAAAAAAATACAGTAGAATCCGTGTGAAAAAAAATTCAGTGTTTGCTGAGCAGTATTCAAGTAGAAGAGATGCAAAGGTTGAATGTTCTTAGAAGGTGAGCTGCTTAGAAAATAGCATTCTAGATGTCCAGTGGAAGTTCTTGTTGGAGTTTGAGCCAGTGATTCCCACATTCTGCTGAAAAACCAGCCAGGTAAAAATAGTTACAAAATTCTAGAAAAATCATTATTCAAGGAAAATCCCTTTACAAGATACTAAATCATGTTGTCTAAAATAATTAAGACAACAGGAAACAGATCAACTTCCAAAATGACAGAGTAAGAACCTCAGTGAACTTACTCTCCCTCTAAAACAGTGAAAATATGAGCAAAACAACTGAAACCCGTGACCCGTAGCATGTGCGCTTAGTCACCCAGTCGTGTCCAACTCTGTGACCCCCGTGGACTGGAGCCCGCCAGACTCCTCTGTCCATGGGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTCCTCCAGGGACTCTTTCTGACCCAGGGATCAAACCTATGTTTCCTGCATTGGCAGGTGGATTCTTTACCAGTGCACCAGCTGGGAAGCCCATGAACTGTAGACCTCTTGACAGTTTAACCAAAGCTTCACCATGAGCTGAAAATCATCTATTAAGAGAAACTACTGAACCTCAATGAAAATTAACAGTTTACTTCTCATCAGAAAGCATAGAGGCCAGAAGACAGTGGGATGATGTCTTTAAAGAGCTGGAAGAAAAGACTTCCTACCAAAAATTCTATATCTAGCTAAATTTTCCTTCAGAATTAAAGAAGAAATTAAGACATTTCCAGATAAGCAAGAAGTAAGAATTCATCACCAGCAGACCTGCCTACAAGGAGGAGTCCTCAAGCCTTAACGAAAATATGTTAGCCACTAACTTGAAACCATGCAAAGAAATAAAGAGCATTGGTGGAAGTACCTATGTAAGTTTTATAAAAGACGATATAAGTGTATTTTTGTTTGTAACTCTCCTGTCTGCTTTATAAGACAATTGTGTAAAGCAATATTTATAAAAACTGTGTTAATGGACTTAGAATGTATAAAGATGTAATTTGTATGACAGTCATAGCACAAAAGGAGGTGGGGAGGGGAACCAAGTTATATTGGAGCAAGTCTTGATTACCCATTGTTGAAATTGAGTGTGTTTCCAAAGTGAATTGTTTTAAGATGCTAATTGTAATCTCTAGAATGGCCACTAAGAATAAATTTTTAAAGTTACAGTAAACAAATTTTTTGCTTCCAGTTTCAATGTGTGGATTTTTAACCCTCACACCAAACAGTTTTCCAATACCAGCCGGGTGTCCTCCATTTCAGCTTAATTCTGACATTGTCTGCCTGGAGGTAGCATCAGATCCCACGGGTTAAGTGTTCTGCCCCCCAGCTTCAGATGCCAGTCACAAGTCCACTTTGTCAACTGTGCTTCTGATCAGCTAGAAACACAGGTGTAAACTGGAGGCTCCCTTGGATTTGATTAATGTGCTAGAGCAGCCCACAGAATTCAGAGCAACATTTCACTTACTAGATTACTGGTTTATTATAAAAGGATATAACTCAGAAACAGCCAGATGGAAGAGATACAAAGGGCAAGATATGTGGGAAGACAAGGCTTCCATGCCTTCTGTAGGCACACCGCTC EMBV3_06048 CTCATTACCCCTTTCCATGTGGAGAGGTTTGTTAGGTCCTGACTGCATCAGTCATTTGAT Gene GeneID:505819|MASP2:XM_002694057:161_cdna Constitutive 2 NULL GeneID:505819 16 GENE MASP2 NULL mannan-binding lectin serine peptidase 2 EMBV3_16677 TACGGTGCCGCCGGCGGGAGCGGGAGGCAGATCCAGGAGTTCCTGCGGTTGGCCCAGCGG Variant GeneID:100138035|TMCO6:XM_002689220:62_cdna 163^275 4 EMBV3_32653 GeneID:100138035 7 GENE TMCO6 NULL transmembrane and coiled-coil domains 6 EMBV3_29632 AAACCACCACCCTGCCAACGACTATCCCAACTGCAACTACAGTCACCACAGTGACATCAC Gene GeneID:100297816|LOC100297816:XM_002683937:3_cdna Constitutive 0 NULL GeneID:100297816 Un GENE LOC100297816 NULL hypothetical protein LOC100297816 EMBV3_38212 TCTGTGAGAGAGGTGGAGGCAGTGAGTGGGAGAGGGGAATTTATACAATCAGACAGTGAA Gene GeneID:613667|CXCL2:NM_001046513:104_cdna Constitutive 0 NULL GeneID:613667 6 GENE CXCL2 CXCL3 MGC137385 chemokine (C-X-C motif) ligand 2 EMBV3_19818 CCTCCTCCAGAAGATTACGAAGAGGAAGAGGCAGCCGTGGTTGAGTATAGTGATCCTTAT Gene GeneID:537711|ABI2:NM_001101171:131_cdna Constitutive 0 NULL GeneID:537711 2 GENE ABI2 NULL abl-interactor 2 EMBV3_03745 GAACCCGCTCCGGTATATGTGCATCACGAACCTAGATCTCCAGGACTACATCTTCCTGCT Gene GeneID:536513|LRRC52:XM_002685830:52_cdna Constitutive 0 NULL GeneID:536513 3 GENE LRRC52 NULL leucine rich repeat containing 52 EMBV3_06772 CTCAGCTGGAGGAGGCGAGCTCCACAGGCGACAGCGTGGAAGATGAACTGGAAATGGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11346 CACTGCCCTTGGTTTCTACAACAGGGCACTGTTAACCTAGATATCTGGGAAAAAGGAGGG Gene BVT0102_366248 - 1 EMBV3_20715 GK000015.2:80441532-80450758 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011730 1 XLOC_007281 Coding TCONS_00011730 XLOC_007281 Coding Coding - 1:146559945-146560829 - TSS8807 884 1 TCONS_00011730_1 103 0.755656108597285 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.98773428960226e-05 0 0.000413924085596897 0 0 0 4.19720578428534e-06 0 5.1463652518654e-06 0 0 0 0 0 0 TCONS_00011730_1 sp|P63128|POK4_HUMAN POK4_HUMAN HERV-K_6q14.1 provirus ancestral Gag-Pol polyprotein; 1e-09 56.2 31.25 0.893203883495146 1 noncoding 0 0 0 0 -0.032858519476591 0.821587361689646 -0.000235854077989499 0.996789701077009 GCCAGGGCAGAGCCTGGTCTGTAAATTCAGGGAAGCATGGGAGGTCAGGTGAGGTTGAGCCCTGGGGAGGTAGGAAGGAGAAACGGACACCCAGCAAAGGCCCAAGCTCAGAGAGCTGCACTTTGACAGCAGGAACTGCAGCAAAGCAAGGGAGGGGGAGACAGCCCCAGGTCCACCCTCCTCGGTCTGAGTGAGCAATTTTTCCTTTCTGTTGTGCTGCAGACCCCCCTGTAGAATAGACAGGGCAAGAGGAGTGGGAAGTGTTGAAAGTGTTAAAGAGTTAGAAAAAACGGTTTCTAAAAAGACTGACAAAAAAGGCCTAATCTTTTGATAGCTAAAAGCAAAATCTTTTACTATACTTAATTTTCTGACATGGGTAACACTGAATCAAATGAAAGACAGCTCTTTATAGGAGTAATTTTACAGTTATTAAGTAAAAGAGGAATCAAAGTTAAAAAATCTACCATTCAATCATTTTTTACATTTGTACAAGACCACTGCCCTTGGTTTCTACAACAGGGCACTGTTAACCTAGATATCTGGGAAAAAGTAGGGAAACAGCTAAGAGCTTATTGTGTTCAGCACGGCTTGGAGAAAATCCCTACTTACACCCTTCCTCTGTGGAATATGATTAGAGATGCTTTAGATCCAGCTCATGAATTTAAAAAGGTACCTACCTGTTAAAGAGAAAAGTAAAGTTGGAAAAGTACCTGTTAAACAAAAAAGCGAATCTACCTGTTATAAAGAAAAGTGAAAATGAAGAGGCTATACCTAGCTATTGGCAGCTAAACGAATGGCTAGCCACTATGACTGCCAATGAACATGTAAAAGATAGGGATGAAAGGAAAGATCAGACCTCCCCTCAAGATGAGAAAGATTTAGAG TCONS_00005584 . 5' 1075 TCONS_00005584 . 5' 1075 EMBV3_17133 AGACGGTGGAAACCAGAGATGGACAGGTTATCAACGAAACTTCCCAGCATCACGATGATC Gene GeneID:280955|VIM:NM_173969:49_cdna Constitutive 0 NULL GeneID:280955 13 GENE VIM MGC139781 vimentin EMBV3_36759 CCCCAGCACCTGCTCAGGAACCCACACGAGATTGGCATAAATCCAGGACTGATGGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17637 CCCACAGGCTTGAACGGTGCCTCAAGGAGCTGACCCATCAGGTAGAGGAAGATAAGAAAA Gene GeneID:526674|MYH15:XM_002684737:142_cdna Constitutive 0 NULL GeneID:526674 1 GENE MYH15 NULL myosin, heavy chain 15 EMBV3_22902 ACTAAGTTTGGTTGTCTTCCTGTTTGGTCTGGGTCGTGTGGCTTTGGGGGAGATGGGTGT Gene GeneID:505570|C13H20ORF11:NM_001037587:880_cdna Constitutive 0 NULL GeneID:505570 13 GENE C13H20ORF11 MGC134411 chromosome 20 open reading frame 11 ortholog EMBV3_27929 CTCTGCACCTACTTCTTGAACACAGATTTGACACGAACTGGACCTCCCTCAGCCACCCTA Gene GeneID:788151|ADCY4:NM_001099208:296_cdna Constitutive 0 NULL GeneID:788151 10 GENE ADCY4 MGC152565 adenylate cyclase 4 EMBV3_38826 CTCTTACTCATCTCCTATGGGGTCATTCTGTGCTCCCTGAAGAATCGTGGTCAGGTAGGG Gene GeneID:788572|LOC788572:XM_002683713:4_cdna Constitutive 0 NULL GeneID:788572 9 GENE LOC788572 NULL similar to olfactory receptor Olr701 EMBV3_02619 ATCATTCCGGAGGATGTGGACAGCGACTTGGGCTTGCCCTCCGACTGCCAGGGGACCCGT Gene GeneID:535441|LOC535441:XR_083909:176_cdna Constitutive 0 NULL GeneID:535441 17 PSEUDO LOC535441 NULL similar to Zinc/RING finger protein 3 precursor (RING finger protein 203) EMBV3_02109 CCCAGTTTGACTGCAGGGGGCGTCTGCGGCGTCGGAGGGGCACTCTTCTGAACAAATAAA Gene GeneID:618720|TMEM161A:NM_001098144:68_cdna Constitutive 2 NULL GeneID:618720 7 GENE TMEM161A MGC138998 transmembrane protein 161A EMBV3_02998 ATGGTACATACCTTCCAGGCCTCCTAAATTTTGTGGGGAAGGGGTGGGGATAGGGGGTCA Gene GeneID:520410|LRRC10B:XM_002699282:207_cdna UTR3_Alt 1 NULL GeneID:520410 29 GENE LRRC10B NULL leucine rich repeat containing 10B EMBV3_12776 ATTACAAGAAGCCCTCTGCAAGCTCTGTAGCCTCCCTGGGCTACCTGCTTATCCTGCTGG Gene GeneID:100138474|LOC100138474:XM_002691815:484_cdna Constitutive 0 NULL GeneID:100138474 12 GENE LOC100138474 NULL similar to LOC513111 protein EMBV3_23379 TCCGAATGTATTGGACAGCTTTTACTGTGATCTTCCTCGGCTCCTCAGACTGGCCTGTAC Gene GeneID:100298322|LOC100298322:XM_002690710:362_cdna Constitutive 0 NULL GeneID:100298322 10 GENE LOC100298322 NULL similar to odorant receptor MOR83 EMBV3_16510 AGTGTTATCTCGACCAGAGACTAGGACTGGAGAGGGCTGTACGGTATTTAATGGCACCCA Gene GeneID:540176|ATP5G3:NM_001034692:34_cdna Constitutive 0 NULL GeneID:540176 2 GENE ATP5G3 MGC128252 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) EMBV3_23096 ATGCCAGTGAAAGCCAAGGCATAGAAACGCCTGTGCCCTTTGCCCCCCGTAACGTGCTTT Gene GeneID:280961|ZFX:NM_177490:2_cdna UTR3_Alt 2 NULL GeneID:280961 X GENE ZFX NULL zinc finger protein, X-linked EMBV3_00259 CTGGAGCCACTGGCCTGGAAGAGCAGAGTTGGCCTGTCTGCCATCGGCTATGCCGCTGCC Variant GeneID:534894|PQBP1:NM_001046389:96_cdna 332^524 3 EMBV3_13462 GeneID:534894 X GENE PQBP1 MGC129091 polyglutamine binding protein 1 EMBV3_11688 TGACCCTACTCCAGGCCTTGGGCATCTTGGCTTCCTGTTCGCCAGTTGCTCTGCAGTCTT Gene BVT0102_051615 + 0 NULL GK000005.2:109860657-109876441 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193335 TCONS_00193336 1 XLOC_117440 Coding TCONS_00193336 XLOC_117440 Coding Coding PEX26 5:109855247-109865796 j TSS144504 3639 1 TCONS_00193336_1 329 0.101401483924155 5 0.655479711793705 0.00104641457057651 0.00128643113990627 5.26716049605728e-08 0.000546199861436125 0.000382355837496453 9.63525948743025e-05 0.000264205790027836 4.19495549740924e-09 5.71352506094079e-08 2.83652708909229e-09 7.98858029599866e-09 1.85255958748357e-05 4.63133129331613e-06 7.48144767797321e-05 2.83744778732918e-07 0.00686664332265183 0.00438106580687944 0.00846212504880155 0.000680143296824257 0.00120327074952432 0.000170618010295764 0.00354864927786567 0.00160789741439978 0.000635190143990279 0.0017415924263119 0.00116100687307398 0.000377717671915614 0.000712308716036829 0.000218692446729985 0.00236601446570477 XM_005207336.1 PEX26 PREDICTED: Bos taurus peroxisomal biogenesis factor 26 (PEX26), 0.0 6359 99.11 0.97829073921407 NM_017929.5 PEX26 Homo sapiens peroxisomal biogenesis factor 26 (PEX26), transcript 0.0 821 82.15 0.220390217092608 TCONS_00193336_1 sp|Q7Z412|PEX26_HUMAN PEX26_HUMAN Peroxisome assembly protein 26; 7e-138 398 80.15 0.808510638297872 1 coding 0 0 1 1 0.149300201688681 0.35443233377557 -0.0242064567390155 0.599213381684392 GTCGTGGGACCGGGTGCCCAGGGACTCAGTGCTGCACAAATCCGAGGGCGCCAGGCTGTCCCGCGCCAGAGCCTGTGAAGACCACCCCTTCCTCCTCCCCAGACTGCACCGCACACCCCGCGCCCCTAGAGGGCTGCGTCCTGGCGCGCACTTATGAAGAGTGACCCCGCAACCTCCGCAGCCCCGCTGAGGGCGCTCGGGGGAGCCCTGCGGAGCAGCGAGCCCGTGCGTGCCGTCCCGGCCCCGTCGGCGGCCGCGCTTCTGCTGGAGGAGGCGGCCGACCTGCTAGTGGTGAACCTGGACTTCGGCGCGGCGCTGCGCACCTGCGAACGCGCCTGGCAGGGCCTGGCGGAGGAGCCGGCGGGCGCCTCCTTGGAGGTGAAATGCTCTCTGTGTGTTGTGGGCATCCAGGCCCTGGCAGAAATGGATCGGTGGCGGGAAGTCCTGTCCTGGGTTCTTCAATATTACCAGGCTCCTGAGAAGCTGCCCCCCAAAGTCCTGGAACTGTGTGTTCTTTTATACAGTAAAATGCAAGAGCCTGGAGCTGTGCTGGATGGAGTCCGTGCTTGGCTTCAAGACCCTGACAACCAGGGCCTTCCAGAGTATAGATCCTTAGCAGAACTTCACCTGCAGCGAGTGCTACTTCCTCTGGGCCTCCTGTCAGAGGCTGAAGAGCTGGTGGTGGGCTCTGCAGCCTTCAGCGAGAAACAGCGGCTGGATGCGCTTCAGGCCGTTAGTGCAGCGAGGCAGCAGCAGACACATGGGCACTCTGGCTCCGAGGAGACGCGGACACTAAACCAGGAAGGCTCCTCCTCCCACAAGTTCCTGTCTCTCCTGACGTTGCTGCACCAGCTCTGGGACTCTGCAGTCAGCCACTTCTTTTCTCTGCCCTTCAGTAAGAGCCTGCTGGCCGCCTTGCTCCTCTGCCTCCTGGTGTTGAGGTTTGATCCAGCTGGCTCAGATCTTCCAGCGGATCCGCGAGGCCGTGTCTCCTCCTCTCTGCCAGCTTCCCATCCAGCACTGAGTGGTCGTCCCTGCTCGCCTCAACCCCCTGTGCCCCAAGCCTGCCGGAGGAGCAGAGTCACTCATCCTTGGCAGCCTGCTTCCTGCAGCCGATGGGCCCTGCCAGCGCAGCCAGCCTAATTCCAGGGGAAGCTGACCTGGCTGGGGCACTGTGTCAGGCTGCCTCAGCATCCTCCCCTTTGCGCCCCGTGCTGGCGGGCCTGGCAGGTTTTATGGAGACAAGAGGCACAGCCCTGCAGAGGAGGGGTTGTGGGAAGGGAGTGCTTCCTCCTTGACATTCCTTGACACGATCCGTCTTCCTGCAGAAGCAGGGGTTGGTCTTTCAGGCCACAGGTTCATGCAGCTGGAAATTCAGAGCAAGGTCCTGGCTGGAGGACCTTGGCCTTGCACTTGCATGGAACACTTACCTCTGAAGGTTGTCCCCGGGACAGGCTCCATAGTCTGGTCTGGCTTATCACTCCCCATTCCTCCCCAAGCCCGGAGATGTGCCGTGGGCTGCCCTCTGCTCACACTGAGCATGGCTTCCTGAGCCTCAAGTCCTCTTCTAACTGGGTAAGGGGATCTGGGCAGCTGCCTCCTGGACTAAGCTCTGTTCCAGCTGTCAGTGGCCAAGCGGGGCTGTGTGAGGAGGTCTCTCTGCCTTCTCCCTCCTGTTGCCCCTTCCTTCCTGCTGCCCCCCACCCCCCTCAAGGTGATGGTTTGCGCTCTGCCTTGCTGGTTCTTTCACTGGCTTCTGCTGCATCCTTGGCACACCCTGTTGCTGGCTCCCCCCTTTCTGTGTCCTGTTCCAGTTATGTTCTGCTGTTCGTATAACACACAAGTGTTTCTGCTTCTGCATCCTTGGAAAGTAGGCCAGCCTCAAAAGCTGATGCACTGAAAATGGAGCAGATAATCAGGGGAGCTGGAAGGATGTGTGGAGGGGGTTGGGCAGGGGGGAGGCTTGGGAGGCAGTGAACGATGTTGCTCCTTGTCTGGGGGTGGGAGGCAGTAGGGCCCTGCGGTTGTGCAGCTGAAATGTTTCAGTGCTTTCTCTCAGTGGCCGCCAAGAATCCTCCCTGTCTCTGCGGGGACATGGAGGCCGTTGCTGTGGGGCTGGGGGATGGAGGCGCCTAGCAGGCCAGGAAAACCAGGGACTTACCAGCTTTGCATTAAGACCCTCAGGAGCTCCAGGTCAGCGGCATCGCTTTCATAAAATGATGGAGTGAGTAAGCTTCAGGCCCTGGGAGGTTAAGTCCTAGGGTGTCGTAAAACATGCTGAGAGAAAGGGAGCTGATCAGGCTCGGGGATTTCTCCTTTACAGTGATGTTTAAAACCTGGTCCTGTTCGTGCCACGGATAGAACTCTTGAGTGGCTTCCCCTGGCCTGAGGGTAAAACCCCAGTTCTTATGGAGTGTAGGGACCTTGGGCACTGGTTTTGGCCGACACCCCCACCTCACATGGGGCCTGATCCAGCTGCTGGCAGTCACAGTTTTCTGAGCCCTGCACCCCTCACACCTCTTACCTTCTGCGCCTGCTAATCCTTTGGAGGCCCAGCTCCCCTCTCGTATGGTGGGTTGCCCCTGGGAATCTTCTCCTGGCCCCTGTTTCATATGCTTTCTGCAGTGGTGGCCCCATGCCTTGCAACTGTGGGATTCTGGGGCCTCTTTGAAGCTGGGGTGTGTGACTGCAATGTTGAAGTGGTGGGAGGCTGCCCTCCCACCTGTTGGTGTGATGCTGTTGGGAAGTGATTTAACCTCATCTCTAAGGTGATTGTCCTCTCACAGGAATTTTTGGGTGAGTTGGGTGAGTAAATGAGCCTCCAGGGCAGTGTTAGCAGGTTCCTGCTTCGGGTAGGAGCCCCATGAGGGGTGGCTGTGTCCTCACTGCCCGGCTGAGGGCCGGGGGTTAGACGGTGTTCAGAGGCATGTCGGAGAATGAGTGGATGTAACTGACAGCAGCCTCTGCTTCAGTGTGGGGGAGGGGGGTTGTGTTGTGGAAACCCTGACTTCTGTCGCCCCGAAGCCCGTGTGACCCTACTCCAGGCCTTGGGCATCTTGGCTTCCTGTTCGCCAGTTGCTCTGCAGTCTTGTCTGGCATCCAGCCCCAGCTCCCCTCATCTGGCAAGGAGCTGGACCCACTGCTCGAGTGGCTGGGCCTTGTCTGGGGATGCAGCTGCTGCTCCGGCCGGCCTCAGCGCGAAGCCTGATGACATCTGAAGCGAAGGGCAGGCCACCTGGTCACTCCAGCACCGGTGCTGACCAGGGAGGTCCCCACTAGCTTCAGCCGCCTTTCAACCCTTGAGGTGTGGCTGGGCCAAATCAAGATGTGTAAATATAAAATATACACTGATTACAAACACAGAGCTAAAAAGAGTGGAAACTCGGTAATTTTTATATTGATCGCGTATTGTAAATCAAGATGCTGTGTAAATATACACACTGATTGCAAACACAGAGCTAAAAAGAGTAGAGACTTGGTAATTTTTATATTGATGGCATATTGAAATGATAATCTGCATATATTGGACTAAATAAAATCTGTTATTACCTGTTTGTTCCACTTTTTTGTGGGGCTCCTAGAATGTTTCAGCGTGCACGGAGAGCTCGCTTCGTGTTTCTGTGGGCCTGTGCTCAAAGC EMBV3_40146 GATCGTCCATCAACGACCCCCTCACCAGATTCAGAAGTGCACCATGTCTTACGGAAAAGA Gene GeneID:100335160|LOC100335160:XM_002686634:32_cdna Constitutive 0 NULL GeneID:100335160 4 GENE LOC100335160 NULL hypothetical protein LOC100335160 EMBV3_25993 GCGACTTGCCCCAGCTCAACCCCAGAGCGGGAGCTGTTGGCCAGAGGAAGTGGCTGGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16310 CACCAGCTCCAGTGCATGGGGTGTGGCCATAGTAACTTCCCTCTCGGCATATATAGAGAT Gene GeneID:510811|HOMER2:NM_001075467:105_cdna Constitutive 0 NULL GeneID:510811 21 GENE HOMER2 MGC142310 homer homolog 2 (Drosophila) EMBV3_04627 GCCCTGCAGGAGATCGAAGACAGTCAGTATGAGATCACTGAGCTGCCCGACTACAACAAG Variant GeneID:510920|CDK20:NM_001098933:20_cdna 451^948 2 EMBV3_15497 GeneID:510920 8 GENE CDK20 CCRK MGC154961 MGC166397 cyclin-dependent kinase 20 EMBV3_38387 AGATGGACTTATTCCACTGGCAGATCATGGACGGGAACCTGACAGGGAACGTGCGAGAGT Gene GeneID:515954|LOC515954:XR_083641:427_cdna Constitutive 0 NULL GeneID:515954 3 PSEUDO LOC515954 NULL similar to Putative hydroxypyruvate isomerase (Endothelial cell apoptosis protein E-CE1) EMBV3_08691 CCATTTGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCAC Gene GeneID:100336409|LOC100336409:XM_002692223:1455_cdna Constitutive 0 NULL GeneID:100336409 13 GENE LOC100336409 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_39378 CTCAATGAAACTATGAGTCATGCTGTGTAAGGGCCACCCAAGATGGACAGGTCATGGTGG Gene BVT0101_067357 + 1 EMBV3_36685 GK000006.2:14342392-14410554 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41528 AGGGTAAAGTGTGTTCAGGCCATGGGGTGTGTAGTAATGAAGCCACCTGCATCTGCGATT Gene GeneID:531241|ADAM23:NM_001083458:35_cdna UTR3_Alt 2 NULL GeneID:531241 2 GENE ADAM23 MGC139293 ADAM metallopeptidase domain 23 EMBV3_11490 GGGCCTGCTGCAGGCCGAGTACACCGAGGGGGACCTGATCGAGAAGCTGCTCAACTACGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28081 CACCTACAACATCCTTCCGGGCTGCCGTCTGAAGGGCCCGTGCCCACCCGCCTTCTCCAT Gene GeneID:100138921|LOC100138921:XM_002691697:38_cdna Constitutive 0 NULL GeneID:100138921 11 GENE LOC100138921 NULL hypothetical protein LOC100138921 EMBV3_25142 CACGGCAGAGCTTACAGACTTTGTCCTGGCCATTTTTATCCTACTGGGGCCACTCTCTGT Gene GeneID:528930|LOC528930:XM_002683750:2_cdna Constitutive 0 NULL GeneID:528930 15 GENE LOC528930 NULL similar to olfactory receptor I7 EMBV3_12912 GCCATCTCTTACTCTAGAACCAACTGCTACACACTCAGGAATTTTGTGAGCTGGTCACCT Gene BVV0102_047621 - 1 EMBV3_27582 GK000025.2:39828743-39998763 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149664 1 XLOC_091538 NonCoding TCONS_00149664 XLOC_091538 NonCoding NonCoding - 25:39876580-39877903 - TSS112199 1323 1 TCONS_00149664_2 96 0.0718065003779289 1 0 4.11358150422404e-05 0 0 1.25535126463107e-05 0 0 0.000312964535934233 0.000102825820378852 2.38553297386762e-05 0 3.28756635001256e-05 0 0 0 0 0 0 0 5.42021380527704e-06 0 0 0 0 0 0.0002880323386026 0 0 0 7.33876832859706e-06 0 XR_226468.1 LOC101903098 PREDICTED: Bos taurus uncharacterized LOC101903098 (LOC101903098), 2e-18 98.7 84.21 0.0695389266817838 0 noncoding 0 0 0 0 0.00436638215278151 0.971631685513288 -0.0144166455837346 0.859623307188016 GATGTCCTTTTGAAAGAAGGCATGGGGAGTTTAGATCAACAGAGGGGAAACTATTTTTGCTCAGTGTCTTTTGTTTTTTTAACCTCGTTGCCAATTGTGGGGTTTCCTTTCAGTTTTAAGTGAAGCCTTTTCAATAGAAGTGTAAATAATAATTACTTCCTCTCTATTCCTCTGACTCTGAACAGATATCAGGGGGTGACTTTGTGGCAAGGCCTCAGCTGACTGCAGAGGCGGCTGCTCCCTTCTGGAGCTGCTAGAGGTTCGGTGAGCACGGGGGCGAGGTGACCACCCTCGGCAGACGAGGCGACTATTCCCTAAAAGGCAGTGGGAGGAGGTTTTACCTCCCTTCACCTTTTCGTCTTGGCTCAGTGGACAAAGCTGGGAGAACTGGATATATTTACACAGAATGGAGAAAATAAATATTTCTTTATCCACACCCAGTGATGCAGATAAGCTTGCTCCCTCTCAAAAACAGACCTGACGTATAGTTTATTTCTGTGATGGAAATACTCTCATCACCGTCAATTTCAAGTTACTGATGGTTTGGTGACCAGCTCACAAAATTCCTGAGTGTGTAGCAGTTGGTTCTAGAGTAAGAGATGGCACATTTACAACATACCCCAGTATCTCTATCTTCCATTTACACCTGTCTAGTCACTCAGTTGTGCCCAACTCTTCTACGACCCCAGGGAACAGCCCACCAGGCTACTCTGCCCATGAGATTTCCCAGGCAAGGATACTGGAAGGGCTATCTATCTGTCTTTTATTTATCATCCATCTTTATCATTCATTCATCTATCTCTGTCTTCACTCTATCTACCTACTTAGCCATTACCCATCTGCATCTACCGATCTATCTTCATCATCTGTGGATCTGTCTAGAAAGATAGAAGTGTCTCAGAAACCCCAGGCACCCCACTTCCAAGCTGTTTGAGTCTTTCCAATCCAGACATGTGAAGAGAACCTTTGGGATGACCCCAGCTCCAGCTGGAAACATTACATTACTGTACAATCAGTGTGACAAGTGTCACCAAAGCTACATTCATGAAGTGCCACCAGGAGCCCAGAGGAGGACGTCAAGAGGGGCTTCCTGGAGAAGGGGGCACATCACTTGCGAGGAAAGGACCCACCTGGTCATGCTCTCTGCCTGAGGACGTGGTGTGTGAGATTTGCCAGTGAACAGGGATGGAGTTAATCTCATGTCATAAAGAGCTTGTGCCCTGATGCTTTGAAGGACTTTTTGAAATATCAAGAAACATAAAGAAAAATGTAACCAGTACAATGCCCTATTTGTCAGAATACAGGATTTAAACCATTAAAATG TCONS_00147399 TCONS_00147400 TCONS_00147401 . 5' 47839 TCONS_00147399 TCONS_00147400 TCONS_00147401 . 5' 47839 EMBV3_32139 GGTGGAACCAAGTGGCTGGATTCACGTTCCCTTAACTGATAATCATAAGAAGCCAACTCG Gene GeneID:783986|ANAPC10:NM_001080357:31_cdna Constitutive 1 NULL GeneID:783986 17 GENE ANAPC10 MGC133969 anaphase promoting complex subunit 10 EMBV3_05132 TCCCATTCTCCCCACTCTGGGACACACTGCCTTGTTTCACTGTAGAATGTGGGTCAGATT Gene GeneID:513767|LOC513767:NM_001083681:23_cdna Constitutive 2 NULL GeneID:513767 19 GENE LOC513767 MGC157333 phosphatidylcholine transfer protein-like EMBV3_33711 GCTGTCCAGAGCGCTGTCCACAACAGCCAGACCCTGGACCACCTGGCTCCCCTTCCGTTC Variant GeneID:616745|PATL2:XM_002691093:224_cdna 304^390 1 EMBV3_09895 GeneID:616745 10 GENE PATL2 NULL protein associated with topoisomerase II homolog 2 (yeast) EMBV3_32242 TGTGAAGGAGGGTGATGTGCGAAGACAGTTCCTACCTCCAGCTCCCCTGCAAGTCCTCTG Gene BVV0102_196420 - 1 EMBV3_37690 GK000001.2:67810800-67839379 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15144 CCTTCAGAATTCAACTGTCCAAATTCCTGTATCAGCTCCAGCATTGACCAGACAAGTTGG Gene BVT0102_426171 + 0 NULL GK000018.2:56493041-56497091 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17322 AAATGCCAGGTGACCACATGAACCCCTATGGCAACGACTCCATCTTCCACGACATCGACA Gene GeneID:100337389|LOC100337389:XM_002691605:180_cdna Constitutive 0 NULL GeneID:100337389 11 GENE LOC100337389 NULL LIM homeobox transcription factor 1, beta-like EMBV3_02431 CAAAGCTCATTTCCCAAATTCCTTGTTGGCCATTGCTTTCAGATTCTTGCTGTTTTGCCT Gene GeneID:539000|RAB7L1:NM_001099094:91_cdna Constitutive 4 NULL GeneID:539000 16 GENE RAB7L1 MGC148495 RAB7, member RAS oncogene family-like 1 EMBV3_09177 GGCTCCATCTGCCTGTCGATGTCACTCCACTTCCTAATCCTTTACGTGGAACCCTTGCCA Gene GeneID:540568|ATP2A2:XM_002694492:359_cdna UTR3_Alt 2 NULL GeneID:540568 17 GENE ATP2A2 NULL ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 EMBV3_19434 AACTGACGATGAACCTCCTCCGGGATAAAAGCCCCAACATCCAGTTTGAAGCCTTTCACG Gene GeneID:519724|CAB39L:XM_002691786:399_cdna UTR3_Alt 5 NULL GeneID:519724 12 GENE CAB39L NULL calcium binding protein 39-like EMBV3_25555 TCTACTGAGATTATTTTACTTTGCACTGATAAACACAAAAATCTGGAGAGAACTGTTACC Gene GeneID:507478|PHAX:NM_001166562:34_cdna Constitutive 2 NULL GeneID:507478 7 GENE PHAX RNUXA phosphorylated adaptor for RNA export EMBV3_24997 CTGCCAAGGTCTGCCTTTTTGGACCTGATTCCAGAGGATTGCTGTTGCTGTTGTAGTTGC Gene BVT0102_277888 - 1 EMBV3_33553 GK000010.2:65971533-66751292 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25972 GACTTTGAACTGGACAAGGAGGATATGAACACCTTGCTGAGCTACAACAGGGACTGGAGG Gene GeneID:317748|AKR1B1:NM_001012519:5_cdna Constitutive 1 NULL GeneID:317748 4 GENE AKR1B1 MGC134297 aldo-keto reductase family 1, member B1 (aldose reductase) EMBV3_33465 ATCAAGCCTAATTGCGAGAGCTGCTATTTAGCAAATATTTAAATTGCTCAGACTGAGGGA Gene GeneID:100125267|LIPA:NM_001103323:2_cdna Constitutive 0 NULL GeneID:100125267 26 GENE LIPA MGC159953 lipase A, lysosomal acid, cholesterol esterase EMBV3_12402 GGACAGTCTTTCTACAACCAAGATCAAACCTTTAGTACCTGCCAGAGCCAGTGGGCTGAG Gene GeneID:506390|EXO1:XM_002693955:137_cdna Constitutive 0 NULL GeneID:506390 16 GENE EXO1 NULL exonuclease 1 EMBV3_18649 ACTTGCCTCCATGCAGTACCTGGCTGAGAAGTTCCGGATCCTTTGAAGTTGAGCCCAGTA Gene GeneID:785476|MGC152340:NM_001099194:17_cdna Constitutive 0 NULL GeneID:785476 X GENE MGC152340 NULL hypothetical protein LOC785476 EMBV3_34638 CCCTTCAACCTATCCTCAGCCCCAGGACACATGATGGAGAGAAGAACATGGATCCTCTGA Gene GeneID:529195|MEFV:XM_002697878:426_cdna Constitutive 0 NULL GeneID:529195 25 GENE MEFV NULL Mediterranean fever EMBV3_30080 TGGAGAAAGGAGTGATATACCCAGGGTGACCCCTGCAGATCAGAGCAGTGTCACAAAACT Gene GeneID:614627|TMEM222:NM_001035451:272_cdna Constitutive 2 NULL GeneID:614627 2 GENE TMEM222 C2H1ORF160 MGC129106 transmembrane protein 222 EMBV3_34117 TGACTGTCGTTCCTAACCAGGTGTATCAGCCCCTTGGTCCTTGCCCTTGCAATTTGACAG Gene BVV0102_089789 - 1 EMBV3_00726 GK000017.2:54211967-54276965 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077294 TCONS_00077291 TCONS_00077293 TCONS_00077295 TCONS_00077296 TCONS_00077292 TCONS_00077290 1 XLOC_047040 Coding TCONS_00077291 XLOC_047040 Coding Coding LOC100847961 17:54245605-54274441 j TSS57819 2451 1 TCONS_00077291_3 653 17 0.915588694295127 2.68030169869922e-37 3.00189052868337e-11 0.000607139399108369 3.0337761897518e-16 8.63015315736943e-43 6.17632949436229e-14 1.14500353334234e-08 3.36980648748693e-20 1.33180205357273e-06 2.22041324822802e-34 2.07466730583587e-17 2.05618999414794e-05 0 1.97832416625464e-16 4.99590792974964e-40 1.90834346041659e-11 8.39603047019809e-15 1.16313489567317e-17 9.94291211759098e-17 1.00572030453847e-06 4.04705269307317e-14 1.87823236701418e-05 4.20602857907009e-47 8.98971468478562e-26 0.00028675445042051 0.00033624223965881 5.54263283627427e-05 2.54703054697205e-07 9.12939628399578e-26 2.33293640115929e-47 XM_003583306.2 TCTN2 PREDICTED: Bos taurus tectonic family member 2 (TCTN2), transcript 0.0 3456 100.00 0.781313749490004 NM_024809.4 TCTN2 Homo sapiens tectonic family member 2 (TCTN2), transcript variant 0.0 1956 82.60 0.781313749490004 TCONS_00077291_3 sp|Q96GX1|TECT2_HUMAN TECT2_HUMAN Tectonic-2; 0.0 996 78.16 0.961715160796325 1 coding 1 1 1 1 -0.0698209205447221 0.52562626866944 -0.000233051519658523 0.996585958651285 CTGTTGTGCAGGCCCGGCGAGCCCCCAGGCATGCGTTTGTCGCCGCCGGTCCCTTTGCTTTTGGGACTCCTCCTTCTGCAGGGCGTCTTGAGGCCGCTGAGGGGAGATCTGGTTTTCATTCCTTCTGTCATCCGCATGTCCGGCTCTGTGGTCAGCGCGTCCCTGGTCGGAGGCACCGAGGATGTGACCGTGTCCCTGACACAGCTGCGGGACGAGATGGGTTTATTGCCAGTTCCCACCTGTGGCGAGCTGAACAATGAGACAGGAGACTGGAGTTTGACTGTCACCCCCACTGTGAATTCGTTGGAAGTGACCGTGAGGTTGAAAAGGGATATGCAGTCATGTTCCTCTAATGGGACAGATCCCTTCCTGGAGGCCCCATGTATTGTCCAAGCTCTTCTTGTTTCAGCCTTTCATAATACATCCTGTTTAGCACATCTGCTCATTCATGTGGAAATTTATGCCAACTCCTCTCTGGGCCAAAATGCATCAGAAAATGTGACTGTCGTTCCTAACCAGGTGTATCAGCCCCTTGGTCCTTGCCCTTGCAATTTGACAGCGGGGGCCTGTGACATTCGCTGCTGCTGTGACCAGGAATGCTCATCAGATTTAACAGCACTGTTCAGGGAGTCCTGTTTCCCTGGTGTTTTTGGAGGAGATGTTAATCCTCCCTTTGATCAGCTCTGCTCCATACAGATGTCACATGGAGTCCCCGACTGGTTTCCATTCCTGTGTGTGCAGCTTGCCAACTCACCCTTTCTCGGGTACTTCTACCATGGTTCCATTTCCTCTGGACATCAAGTTTCCTTTGGCATATATTTGCATACTGATCTAAAAGACTTTTCAGATTTTGGTTACAAACAAGGAGACCCCGTTATGACAGTAGATAAGGCATATTTTACTATTCCACAGGTGTCCCTGGCTGGGCAGTGCCTCTACAACGCTCCTGTGGCTTTCCTGCAAAATTTTGATGTTCAGTGCGTTACTAGCCTGGAGGAGTACCTAGAACGAGATGGAATTACCAGTGCAAAGATAAAGAATGGTGCTATGGGAGGCATAGTTACACCGAAAGTAATCTACGAGGAAGCAACTGACTTAGACAGATTCATCACCAATACAGAAACACTTTTAAGTACTGGACCAGCCCCCAGGAATGTGAACGTGGAAGAACATTATATTTTCAGGTGGAATAATAATACAATCAGTGAAATAAACGTCAGAATTATCAGGGCAGAAATTAATGCCCAGCAGAAAGGAATCATGACACAGAGATTTACAGTGAAATTTTTAAGCTATAACAGTGGTAATAAACAGGAATGGTCTGGAAACCCAGGTTACCAACTTGGCAAGCCTGTTCGAGCTCTAAGCACCAACGGGACAAATAATGTCACAACTTTACACCTTTGGTATCCTGCCGGAGGGAGCTTGTGTTCGACAGCAACTCGCAAACCCATTTTATTTGGAGAAAACGTACTATCTGGGTGCCTTTTAGAAGTTGGAATTAATGAAAACTGTACTAAGCTTAGGGAGAATGCTGTTGAACTGCTTGATTCATTAGTACAAGTGACTCATGTTGCAATGAGAGGCAACTCCGATTACAACGATCTCAGTGATGGCTGGCTTGAAATAATACGTGTGGATGCCCTTGGTGCAGGCGCAGACCCACCTGACAGCAACGTGAGTGGCATCTGCCTGGATGTTCCCGCGCAGCTGAACATCCGCATCCTCTTCTCGGATGCTGGTGCCGTGGAAGGGATGACTCAGCAGGAGATACTTGGTGTCGAGACTAGGTTCTCCTCCGTGACCTGGCAGTTCCAGTGTGGACTGACTTGTGAGGACAAGGCTGACCTCTTCCCCATTGGCGCATCGGTCCAGTTTATTAAGATACCCGCACAGTTACCCCATCCCCTTACAAGGAGAGCCTTACTCTCAGTGTGTTGCCAAGAGCTTACTACTGGTATCCTTCATCATTTTAGCTGTATTCCTCAGTAACCCCTGGATCAGAATACACAAAGCTTAGAATTCAACTACCGTCTGACTTCTTACAAATCATCAGCTTCTACGTCAGAGATTTGTTGTCCTCCTGTGTGCCTCTCTGTAAAATCTTAATAAATGAAATGTTTTATTTTTATAGAACATTTTATTAAGTGCTCCACAAATTAAATTCACATGTGTACCTATCCAAACGTTCAAAGCAATTCAGAGTGGGTGTTCTCACCGATGCACCAGAGTGAGCAAAATGCATCAGAGGATCACCTGTGTCAATAAGTGTAATTAGGAACTTTAGGTCATCACAGCTTATGAAAGTCATAGGAGTTTTGGTCCAAATGTTATTCCTACCACAGAGAGTGAGTTTTTGAATTTTTTATATATTTCTGTTGAAATGATAAGTTTCCACTATTCCAAAGAAAGGATTAGAAAGGCATTAAAGTCTGTTGCCTTAAAAAATAT EMBV3_04277 CCTGCGTATTGCCTTTTCTGAGGGAGGTGCGAAGGAGATGTGTTTGGGGAGCTGTTAGTT Gene BVT0102_274756 + 0 NULL GK000021.2:7225413-7411024 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10499 CCCCGGGAGTCAGAGCTGTACCAGAAGGAGCCGGGACTGTCCCATCTTCTACATGCGCAA Variant GeneID:100336667|LOC100336667:XM_002695213:931_cdna 91^188 1 EMBV3_28537 GeneID:100336667 18 GENE LOC100336667 NULL DNA polymerase delta catalytic subunit-like EMBV3_43511 CGTACATAGTGGCCGTCTTAATGTCCTCTTGGGGCTGGTGAGCAAGCTCGATAAGAGCAT Gene BVT0102_076534 - 1 EMBV3_18564 GK000023.2:31555333-31556332 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134926 1 XLOC_081590 Coding TCONS_00134926 XLOC_081590 Coding Coding HIST1H2BD 23:31547986-31556188 j TSS100497 1711 1 TCONS_00134926_3 126 2 0.791610779173272 0.000742028869814833 2.83156949718838e-05 3.46812822075117e-05 8.53637827657453e-05 0.000119550588382113 4.62578857364855e-05 0.000239355142950636 0.000511228048818197 2.92461119332974e-05 0.000620419443298943 1.56229302943756e-05 1.55778192959891e-05 5.75552848256721e-05 0.000521899278184542 2.25280648126826e-05 0.000526633602229005 8.2650715427407e-24 5.16404452610836e-13 9.14191578825677e-05 0.000503150970290795 5.59137155274196e-06 6.21713924593231e-12 8.57873068097372e-05 0.000117929305976585 4.46193289883659e-05 4.85669855220304e-24 2.15538762676838e-05 8.55801523107109e-05 0.00100343703703153 0.00142916247869669 XM_005223762.1 HIST1H2BD PREDICTED: Bos taurus histone cluster 1, H2bd (HIST1H2BD), 0.0 1548 100.00 0.500876680303916 XM_005249039.1 HIST1H2BD PREDICTED: Homo sapiens histone cluster 1, H2bd (HIST1H2BD), 0.0 686 83.26 0.385154880187025 TCONS_00134926_3 sp|P58876|H2B1D_HUMAN H2B1D_HUMAN Histone H2B type 1-D; 3e-87 254 100.00 0.992063492063492 2 coding 0 0 0 0 -0.046878969903594 0.74495839681669 0.00584842808246362 0.908311696198086 GCTGTGGTGGGAGGTGGGTCTTAACAGTTTCCGTAAAACATGAGGGTAGTACCAGCGAACCGTGGAGTTAAACGGGTAAATCGGCTTGCGCCTAACTTGGTTTACCCTGTGCAAGGCTCACAGAACAGTGCGCTGGTTTGACGTAAACTCCCAACTGCCTCAAATGGCACGATAAAGTCCAGTATAAGTTTGAGAGAAGTAATTCTGCAGATAGACGCTACGTTCTGTAGGGTTTTGTAAACCCCAAATGTGAAATTTAGATGGGTTAGTCATTGAATGGGTTACTTGCATTTTCTTCCACGAGGATATATTGGGACATCAGTATCTTAACCACCATGGATTTTCTAATAATCAGGGCTAATGGTAGGAGACGAAGATAAGGAATGGTGAACTTTATAACAGGGTGACCCAGCCCACAAGCTGGAGTGTCGGCTACAATTATAGTTAGCTGTCCATTGGTTACCTGCCCCGAGGCGCAGGATAATGCTCTTATCGAGCTTGCTCACCAGCCCCAAGAGGACATTAAGACGGCCACTATGTACGGGGCCCGAGCCCATTCTCAGCGTTACACAAGGGAACAGAGAAGTTGCCTTTAGTTACAAACCCAAAACTGGCATGTTCTCAACTACTTGGATCTGGTAGCTGTGAATTACACAATGCAGTTTCCTGAACAGGGTATTTATACTAGCTATGGGTAGCCTAGAGTAGTCCCTGTGATTGGGTCAAAGCAAAGTAACAAAGCAGCCAATGAAAAGGTAGACCTGTTAGAATAATTTACATTCGTGTTTATGACGCCACAATAAAATTAATCCAATCCTGAGCGAAGTCTTACGAACCTCATTTGAATACCGCGTCTATAAATAAATGTGGCCTCACTGGAAGCAACTATTTTCTCAGCTGTCAGTGTAACTGTTGCAGTTTTTATCGGTAAGATGCCTGAACCCACCAAGTCAGCTCCAGCCCCAAAGAAAGGCTCGAAGAAGGCGGTGACCAAGGCGCAGAAGAAAGATGGCAAGAAGCGCAAGCGCAGCCGCAAGGAGAGCTACTCCGTGTACGTGTACAAGGTGCTGAAGCAGGTCCACCCGGACACCGGCATCTCGTCCAAGGCCATGGGCATCATGAATTCATTTGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCGCGTCTGGCGCATTACAACAAGCGCTCGACCATCACATCTAGGGAGATCCAGACGGCCGTGCGCCTGCTGTTGCCCGGGGAGTTGGCCAAACACGCCGTGTCCGAGGGCACCAAGGCTGTCACCAAGTACACCAGCTCCAAGTAAACTTGCCAAGGGTGAGATAAGAGTACAGAGAAGAAATGAATGCAAACAGTTAACAGAAAATGAAAATCTGGCCATAGAAGTTATGAAGTATGATGTCTGATCTGCCTGAAGTAATTGATTATTGTGTATATCCCATTAAAATCCCACCCATCCTGATTTATTGCACATTGATTTACCTGCAAAGGAGAAGGAGATCATTACCTAGGTGGAAGAGCCTAAACAAGGTGTTTTAGCTTTGTCATTTTATTTAAATCATGAAGATAGAATTTATTTCTATCATAGGCCTAATTACTGGAAATTTATTATTTACCATCTACTCACTTAGGTGGGGGAAGTCTAAAGGAGAGAATGGCAAAACATCTGTGAGATTCCACATTTAATAAAATCTGTGGATAACT EMBV3_35148 TGTAGGTGATGATATTTGGGACCCCCAGAGAAATAGCCAGCTCCCATCCAAACCACCTTG Gene BVV0102_325367 + 0 NULL GK000005.2:65676300-65737955 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30750 GGGAATTACCACCCAGAGGGAAGAGAGGGGCTGCAGATGATCAAAATAACAGTGCTAAGG Gene GeneID:786604|LOC786604:XM_002685718:420_cdna Constitutive 0 NULL GeneID:786604 2 GENE LOC786604 NULL similar to Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 / hnRNP B1) EMBV3_01870 AAACACAGGAGCCGGAGCAGAAGCAAAGAGGCAAGAAGACATGAATCCAAAGATAAGTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31815 TGGGAGAATGGATGAACCTAAGCAACCCACTTCCCAGGTAGAAGAGTCAGCAATGATGGG Gene GeneID:617314|ZBTB37:XM_002694152:551_cdna Constitutive 0 NULL GeneID:617314 16 GENE ZBTB37 NULL zinc finger and BTB domain containing 37 EMBV3_23428 GACCAAGATCAAGACTTTCTCGACTACATGATCGACTTGAAGGTGCAGGTGCGGAGCCAT Gene GeneID:789920|LOC789920:XM_002683994:2_cdna Constitutive 0 NULL GeneID:789920 Un GENE LOC789920 NULL similar to testis-specific protein EMBV3_32103 GTACATATCCAGAGCGCCAAGTGTTCAGCTCCGGTTTCTACCGCTTGGATTTAGCTCCCG Gene GeneID:100299043|LOC100299043:XM_002688222:125_cdna Constitutive 0 NULL GeneID:100299043 6 GENE LOC100299043 NULL hypothetical protein LOC100299043 EMBV3_17864 ACAATATGACCACTGGCTCTCACATCTTCACCTTCCCAAAGGCCTCCTTCTCTGACACTC Gene GeneID:531022|TRIM38:NM_001034574:113_cdna Constitutive 0 NULL GeneID:531022 23 GENE TRIM38 MGC128967 tripartite motif-containing 38 EMBV3_33750 ACGTGAGGAGACACAAGGGGGTCAGGAAGTTCGAGTGCACTGAATGTGGCTACAAGTTCA Gene GeneID:534608|ZBTB48:XM_002694108:424_cdna Constitutive 0 NULL GeneID:534608 16 GENE ZBTB48 NULL zinc finger and BTB domain containing 48 EMBV3_10949 CACCGTCATCTGGAATGAAGTCCATCACAAGACAGAGTTCGGCTCTAACCTCACCGGCCA Gene GeneID:528508|LOC528508:XM_002693821:85_cdna Constitutive 0 NULL GeneID:528508 15 GENE LOC528508 NULL similar to Protein deltex-4 (Deltex4) (RING finger protein 155) EMBV3_31908 GAAGCATGTGTTACCAAAAAAGAGAGTATGGCGAGAGAGAAGGGTGTGTGTGAGACAGGA Gene GeneID:513129|LOC513129:XM_002692069:175_cdna Constitutive 2 NULL GeneID:513129 13 GENE LOC513129 NULL hypothetical LOC513129 EMBV3_05670 TGAATCAACTCCCTGACATCACCTCTCATGGTCACAGGTACTCTTGGTGCTGGCTCTTGC Gene BVT0102_082023 + 0 NULL GK000018.2:36141033-36221700 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32697 GGGAACTGTTAAAAGCTGTCTTCCTCTTGGCTAACCCATTCTACTGGTAACCTCAACAGT Gene BVV0102_099908 - 0 NULL GK000012.2:54459147-54776992 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20130 TGCTTCTGGTTGCCACTGGGGTGAGGGCGGAGGGAAGCCTTAAATTCTCCAAACTTCATT Gene BVT0102_056021 + 0 NULL GK000010.2:84684167-84829011 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022745 1 XLOC_013415 NonCoding TCONS_00022745 XLOC_013415 NonCoding NonCoding - 10:84782307-84783171 - TSS16635 864 3 TCONS_00022745_1 39 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00113105331501704 0 8.7121097438619e-05 0 0 0 0 0 0 0 0 6.78141689434203e-06 0 0 0 0 noncoding 0 0 0 0 -0.132819710498278 0.415923614202891 -0.0235578783740452 0.667399400879904 GCTTCCCACATTGGGCTACATTTGTCTTCTAGTGACTTTCAGAACACTCAGAAACCACAAAAGTTACTTTGCAGAGGCTGGGATAATAGACAGGCCTGAATTCTGATGCTTTTCATGACCCACACCCAGCACCACTCCAATCAGGATGGCTGCACTTTCAAAACTGAAACATCAGCCTCAGTTTCCTTTCTTTTTCTGGTGCAAGTTCAAAACAAAGCTTGGTGACCATGGCATTTTACTTTCTGCACTGATCTGAGCAGATGGCTCTGGAACAGCTTTAGATATTATGGTGTTTCTTAGATGTACCTAAATTTCAGCCACCTGCATGGTTCCAAAAAGACAAAGGAGGATGAGAAGGCTCCAATTAAGCTGCCTCTGAATTCCAGGCCACTTTTCTAGAGCTGAGCAATCCTATTCACCTGGAGACCTCTGAATGTCTCCCAGGTGGTCTGCAGGCCCAGCAGTTTTCTGTGACGATGCCTTCATTTGGGTTCTGGCAGAAATTAATAACCTTTATGGGTATCTCATCAAAACCAGACATTCTTCCCACTGAAAATTAATGTGTGCTAATGAAGTTTGGAGAATTTAAGGCTTCCCTCCGCCCTCACCCCAGTGGCAACCAGAAGCAGATGCAGAAGTTGGTTCTTAGGCATCTGTTGGCTTAAAATGTCTGAGAGTCCTTTTTCATAAGGGGCTAAAATAATGTCCGTAAAAAGCTGAAAGCTCACAAATCTCAACCCCAGTGTTCCCCATTTAGTACCTACCCAAATCCCCCACCCCAACAGAAAGAGCCAGAAGCAGATTAGAACCAGGAATGTGTCCCCTCTGCGCCATCCTCTCTGATAATCTAAGCTGAGTGCCACA TCONS_00015087 . 5' 45717 TCONS_00015087 . 5' 45717 EMBV3_16045 ATTCTGTTTACAGCAAGCACCTCCAGCTGCCCAGCCAAGAGACCAGAAGCTCCTTCCACT Gene BVT0102_325562 + 1 EMBV3_38147 GK000014.2:1929355-1930182 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052588 TCONS_00052590 TCONS_00051044 TCONS_00052589 2 XLOC_031510 XLOC_031078 Coding TCONS_00052590 XLOC_031510 Coding Coding CYC1 14:1929277-1932580 j TSS38981 2059 1 TCONS_00052590_2 304 0.0966488586692569 8 0.378861296184131 7.48296196865544e-18 0.000526022273687952 0.000738265512229921 0.000414406323333131 0.0010890543130793 2.57593067869007e-05 0.000197932866340006 0.000114615749204104 0.00098897251474456 1.66371292608691e-05 0.00020596888609235 0.000731925137891693 3.19634734852027e-06 8.81518223058455e-10 2.7113483192033e-05 0.0021394568519151 5.48486248116319e-10 0.000295879785965306 0.000986895814706985 0.000511345327313751 1.61836961404374e-08 0.00016157087585315 2.98251262368542e-08 0.000418753491564741 0.000129091395465139 0.00253550207315123 0.00146593728136455 6.97318751023687e-05 0.000388595408548645 2.68587078406066e-05 NM_001038090.2 CYC1 Bos taurus cytochrome c-1 (CYC1), mRNA. 0.0 1658 100.00 0.445847498785818 NM_001916.3 CYC1 Homo sapiens cytochrome c-1 (CYC1), mRNA. 0.0 1072 85.98 0.443904808159301 TCONS_00052590_2 sp|P00125|CY1_BOVIN CY1_BOVIN Cytochrome c1, heme protein, mitochondrial; 0.0 564 92.92 0.996710526315789 1 coding 1 1 1 1 -0.00642346636085483 0.956410535218611 -0.00470426496112149 0.926124630441706 AGAGGCCGACGGGAGCGGTGGCCGCGCTGAAGAGGGCCAAGATGGCGGCGGCGGCGGCTACGCTTCGCGGGGCGATGGTGGGCCCGCGGGGCGCGGGGCTGCCGGGAGCGCGGGCCCGAGGTCTGCTGTGTGGCGCGCGGCCCGGGCAGCTCCCACTACGGACACCCCAGGCAGTGTCGTTGTCGTCGAAGTCTGGCCTGTCCCGGGGCCGGAAAGTGATTCTGTCAGCGCTGGGCCTGGAGCTGCACCCCCCCAGCTATCCGTGGTCCCACCGTGGCCTCCTCTCCTCCCTGGACCACACCAGCATCCGGAGGGGTTTCCAGGTGTACAAGCAGGTGTGCTCCTCCTGCCACAGCATGGACTATGTGGCCTACCGCCACCTGGTGGGCGTGTGCTACACAGAGGATGAAGCCAAGGCGCTGGCTGAGGAGGTGGAGGTTCAGGACGGCCCCAATGAAGATGGGGAGATGTTCATGCGCCCAGGGAAGCTGTCTGACTACTTCCCCAAACCATACCCCAACCCCGAGGCTGCACGTGCAGCCAACAACGGAGCACTGCCCCCTGACCTCAGCTACATCGTGCGAGCTAGGCACGGTGGTGAGGACTACGTCTTTTCCTTGCTCACCGGCTACTGTGAGCCGCCCACTGGGGTGTCGCTGCGAGAAGGCCTCTACTTCAACCCTTATTTTCCTGGCCAGGCCATTGGCATGGCCCCTCCAATCTACAATGAGGTCTTGGAGTTTGATGATGGCACCCCAGCTACCATGTCCCAGGTAGCCAAGGATGTGTGTACCTTCCTGCGCTGGGCAGCTGAACCAGAACACGACCATCGCAAACGCATGGGGCTTAAGATGCTGCTGATGATGGGCTTGCTTCTGCCCCTGGTCTACGCCATGAAGCGGCATAAGTGGTCAGTCCTCAAGAGCCGAAAGCTGGCCTATCGGCCACCCAAGTGACCCTACCCGGTGTCTGTTTGCTGTCCTGAGCTTCAGGGTCCTCAGGCCCGGGAGCCACACTGGGCCTGCTGAGGTCTCAGGCAGCCCTCCGGCCAAGCCCCTCTTCCTCTGGGACAAGAGGGGGAGGGGCAGGAGCTGGGGCTCCAGTTCCAGATCGTTCAGCGCCCACTGTGGAAATAAATTAAGTTTCTCAACACACCTACCTGAACTATTGTGTGATGGGAGTATAAGTTTGCAGGGGACTCTGGGCTTCTCAAGTGGTGGTAGTGGTAAAGGACCCACCAGATGAGGGTTCAATCTCTGGGTCGGGGAAATCCCCTGTAGGAGGGCATGGCAACCCACTCCAGTATTTTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCGGGCTACAGTCTATGGGGCCACAAGAATCAGACACAACTGAAGCAACTTAGCATGCATGTGTGTGCGTGCGCGTGCACACACACACACACGATGGGACTGGGACCCTTGCCCTGAGAGCTCCTGGGGGTGCCCAGTGTAGTGTGGTCAGGATTGCCCTGCACGGACTGTTGGCTGAGAGTCCAGTCAGCACTGAATATAGGACAGGAAGCAGAGAACTGGAAAATAGCAACATTAATTAGAGTGGCGAGTACTTGGTCACAGGTGAAAAGGGGGTCCTGAGCCCTGCTGCAGTAATCAGAGTCAAGTAAAACCACTTGACTTTCATCCTGAGGACAGCAGGGGGCCCTGGTGCATATCAACCATGGAGAGGCTGGCCTCAAGTAGGAGCTGCAGGAGTTGATCCTAGGACTGGGGCTGGCTGGGAGAGGCGGGCAGCTCTCAGCCCTGCCAAGAAACAGGCAGGCAGAGGCCAGTGGAAGGAGCTTCTGGTCTCTTGGCTGGGCAGCTGGAGGTGCTTGCTGTAAACAGAATGGTCCCCATCTCTGAGTGGATGGCCCCCCCGCTGGCAGTCCACAGGATGGCTGGGAGTGGCCAGGTTTACACAGCCATGGACCTGTTAGTGGGTGGAGGGCCAGGGCGGTGCTTCTTGGCACTGGCCTGTGGCCCTGGCCAGGGCTCTTTGCTTCAGAGTTTTTCTTGTCCCCAAGCAGGGAGT EMBV3_24603 CAACTTGCAGAGCAAATCGGTTCCAGAATTTACCACTTGGAAGGTGTGGTTTTGAGAAGG Gene GeneID:615975|SMPX:NM_001037626:3_cdna Constitutive 0 NULL GeneID:615975 X GENE SMPX MGC128317 small muscle protein, X-linked EMBV3_11167 CACTGCTATGTGATCCAATCCCAGATGACCCCCTAGTACCAGAGATTGCACGGATGTATA Gene GeneID:100337471|LOC100337471:XM_002692219:1443_cdna Constitutive 0 NULL GeneID:100337471 13 GENE LOC100337471 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_32370 GACAACAGCAATCCAAAGCAGGAAGGGAAAGACACTAGTAGAGCACGGAAGTGACACCAG Gene BVV0101_032131 + 1 EMBV3_27525 GK000029.2:26492051-26506378 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17180 TGCCGTTGATGTGGTCTTTGTGGGTGTGAAACAAATGGTGAGAATTTGAAATGGACCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29240 AGAGGCTGTGGGAAGCAGCTTGGGGTGAGGTCACCTGCGTGGGAATTTTGTGTGTATGTA Gene GeneID:616711|RPRML:XM_002696055:364_cdna Constitutive 0 NULL GeneID:616711 19 GENE RPRML NULL reprimo-like EMBV3_03469 TCCAGCCTCTAGCTTTTCCTCCTGTGCCCTGACGCCAGTGGTAAGTATTCATCAGCTTCT Gene GeneID:506928|PEF1:NM_001097992:67_cdna Constitutive 0 NULL GeneID:506928 2 GENE PEF1 NULL penta-EF-hand domain containing 1 EMBV3_18483 TCTGCTTCGACAGAAAACGATGAAACGTCTGCATGCCATCAGGAGACAGCGGGAAAAGCT Gene GeneID:338057|NDUFS5:NM_176652:41_cdna Constitutive 0 NULL GeneID:338057 3 GENE NDUFS5 NULL NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase) EMBV3_32792 TGACGCCCGCCCCTATCCTTGCCCACACTGCCCCAAGGCTTTTTCATTCCCCTCCAAATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19272 GACATGGTAGAAAATTACCCTACAGCTCTGCGGAGTCTGGTGTTGGCCGAGAACAGCATT Gene GeneID:615935|LOC615935:XM_002697257:472_cdna Constitutive 0 NULL GeneID:615935 23 GENE LOC615935 NULL similar to mCG2694 EMBV3_13255 CTGAATCAGACCCCAAATTGGATGTGGTCACAAAACCCACCTTCCAAACTAGTTGGACTG Gene BVT0102_049349 + 0 NULL GK000008.2:103644649-103669130 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228933 TCONS_00228934 TCONS_00228936 TCONS_00228937 TCONS_00228935 1 XLOC_138616 Coding TCONS_00228934 XLOC_138616 Coding Coding C8H9orf80 8:103666263-103693835 j TSS170555 3482 2 TCONS_00228934_1 104 0.15709362435382 5 0.873889231438831 0.00436402288637093 0.00565155966569288 0.00214246971226572 0.00311331999809089 0.00285530388554762 0.00174529815720717 0.00146798491015261 0.0028912964770529 0.00232544463730337 0.00112008911225825 9.49627300025109e-16 2.28426126803725e-05 0.000281810570122722 0.00225116792327796 0.00194718184081053 0.00436394285223763 0.000328957399826283 0.00139420376409394 0.00426447164941153 0.00443088100591274 0.00129775880599576 0.000648922676859802 0.00178096026967661 0.0030344368757603 0.00521101769223088 0.00386966099647615 0.00383680862597271 0.0004287509045337 0.000265377215238039 0.000161374957815216 NM_001078064.2 INIP Bos taurus chromosome 8 open reading frame, human C9orf80 (INIP), 0.0 814 99.78 0.130097645031591 NM_021218.1 INIP Homo sapiens INTS3 and NABP interacting protein (INIP), mRNA. 0.0 1054 79.25 0.347214244686961 TCONS_00228934_1 sp|Q2NKT2|SOSSC_BOVIN SOSSC_BOVIN SOSS complex subunit C; 2e-71 212 100.00 0.990384615384615 0 noncoding 1 1 1 0 -0.918557983473706 0.248120751571247 -0.10130548547164 0.109973441703918 GGACTTCCGCTCCCTCGTGGGTAAGTCTCCGGGAGGCGGAAGAGCAGCGGGCGCGGGAAGGTTGTAGAGTTGCAAGTTGAGCTCGAGTTGCGGGTCTTTAAGTGGTCGCGCCCCCTTGGAGAACGCGACCTGACGGCTAGGCGGTCCTGGCTCTTCCGCCTCGCGGTGTTTGTAAAGTGCTGACCCCTGAACATAGTTGAAACAGAAAATAGGAAGATGGCAGCAAACCCTTCAGGACAAGGTTTTCAAAACAAAAATAGAGTTGCAATCTTGGCAGAACTGGACAAAGAAAAAAGAAAGTTACTAATGCAGAACCAATCTTCAACAAATCATCCTGGAGCTAGCATTGCGCTCTCGAGACCCGCCCTCAACAAGGACTTCCGGGACCACGCTGAGCAGCAGCATATTGCAGCCCAGCAGAAGGCAGCTTTGCAGCATGCACATGCACATTCATCGGGATACTTCATAACTCAAGATTCTGCCTTTGGGAATCTCATTCTTCCTGTTTTACCTCGCCTTGACCCAGAATGAAGAAAACATTTGTAACGGAAGTGACTTTGTAATATCAAATGCCAAAGCTACTATCATTCAGTGCTATACAAACTGTGACTTTCAGAATTTTGGTGGACTTTTTTTTATATGTTTTGTTTCTTTAAAAGAAAGATATGTTTAAGTGAAAGCAAAAAAAGAAGGCTGACCAGGATGATGAAAGCTCTGGAAGCTGTATTATCTGGGAACTGATGCTGCTGCTCAGGACTATAATCTGTGTGTAAGGCAGTTTGATTTTTAATTCTGAATCAGACCCCAAATTGGATGTGGTCACAAAACCCACCTTCCAAACTAGTTGGACTGAATATATCATGTCTACAGTAGAGTTTCAAGAACCATTTAAAGTACTTTATAAACAAATGAGGGTGCTTTTTAAAAATGTGAACCAATAGGCTTAAGCTACATTCACATTTGCTGTTTATAGAATTGATATCAGTGTACCTTTTGTGTTTATAGTCATCAGATCCTAAAATATCCTTTAACTAGTTTCCCTATTCTCAATTTTAAAAGAAAACCCAAGATGCGAGTAAGTTACCAGCCAGTCGTAAATACCTTTTATAAACCTATGCCACTGTAAATTATGTGATTAAATGCTATTAAAAACAATAAGAAATATAGCTTTAAATTTTGTACATGCTCTTATTTAGTGTTACTACATAAATGGTGTGCCTGAACAGTTTTATTGCCCATTTTTGCTCTAATTAGAAGCAAAGTTGAGCCCCTTTTCAGTTAAAGAGGAAAGAATTAGGATAAGCAAGTTTCTCAACATGATACAACTTTGAACAGAATACAGGATGCTTACTTAAATATGCAGTCCCCACAACTGACCTTCAGTTCAGTTCAATCCAGTTCAGTTGCTCAGTCATGTCTGAATCTTTGCGACCCCATGAACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACCCAAACCCATGTCCATCGAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCCCCAAATCCCTCCCAGCATCAGAATCTTTTCCAATGAGTCAACTACCTTAGTCCTACGCAATTAGTGTCTCTAATTCAAAATAAAGTCTGAAAACCATGGGCTAGAGAATTCAGTGTTCACGATATCTAAAAATCCATACATGTGTACGTCCCTGAACCTTAGAGGTCATTGAGCTAACAGTATTTTTTTTTTTACTTTTAATAGGATTGAAATTATGTTTTACACTATATCACAGATATAGTATTTTTTATAACTGACCTCATCTTGGCCTTAAGTCCCCATCCTGTCTGGTGGTAGGATGAGATTTTAAACTGGAAGTTACAGTTTGAGTCAAGAATTAGAAAAGTTTATGTCCCTTTTTGAACAGATTCTCCTTCCTTCCCTTAGGTATTTGTTCCATGCACTCAGCCCCATCTCACCTAAACTGTACGAAGCAGGAGTGGACAGTTCTAGATATGGCTGTGCCATTTAGATTCTCTCTGTTGAGAATTGGGACTGGTTTTCCTCATTTGCGAAGTTGGCAGCTGTCCCCACTGTAATGGTCACCGTTACAGCAAAGGTGCCCTTTCTCCCACTGCTGGCGAGCACCTGGGCCTTTGCCTCTGCCTCTCCAGGTTCACACAGCTAGCCTTGGCCCTTCTTTTCTTGAATCAATGTAAGTTACTCTTCCGTGCAATCCCTGAGCAACTGGCATCATTCTAAATCTACTGATGCTAGGGATATAACATTTTTGGATTGAATAGTTTTTATACTATTGATGCTTCTACCAAACATGTAACTTTTATAACCTGGGTGAAAAGATCTTTTTTCCCAGTGGTATCTTTTCTGGTCTCAGCCCTTATATATCACCTAAATATCTGAATCTTTCAGTCCTGTCTTGTAAGCACTTCCTCTACCCCTCTCCTTACAAATTCAGTTCAGTTCCATGCGTATTTACTAACGCCTGCTCTGTAAAGCACTGTGCTTTAAGGGGAAGAGCTAAGACCTGCTTGTAAAGAAGCCACAGTGCAGAGGAGCCCACTCTGGTGCAGCAGCGAGGAAGCAGCATCCAGTGCGGGGCCCGGGAGCAGCCAAACCTGAGCCACGCGGTCTAGTCGGGCCTAGAAGGTACTAATGCGGTCTTCCCTGGCAGGGAGAGAAGGTCTGCCCCAGGCAGAGCTCAGGATTTCATCATCAGAGTAGGGGCTGCGACAGCAAGGACCGCAGAGGATAATGGGGAGGGTGGCAGTGGGCCCCAGCGGTGCTCCCTCGGGTGCAGGCGAGTGTGGCTAACCCACTTAACCTTAGGACTTCCCTGTCGCTCTGTCTCGTCTGTAAAAGGGGAACAATGCACACACGGCCTAATGCATAAAGTACCTAGACCAGTATTTTTCAGAGTGCAGGTCTCAATACATTACCGAATTGAGAGGCCAACTAAATGGCTGAATGGGGTGTGGCCCGCTTTTTTTTTTTAATAGAAAATAACAGAGTACATGGCATGTAGAAATAGGTTTTGGTTCGTGAATCTTCCTTTTCTGTGCGTTTGTGAGTTTACTTTATCATAGGCTCCACCTGCATGTAAGGCCTTTGAGGGCAAGGGCTTTTGTTCTTCTTCCTGTTTACTACTGTATCCTGCTGAGAATAGTATTTGGCATATAGTAGGTGGTCAATACTTAATGAAGGAATGAATGAATATGACCTGAATTGTGATGTAAAGGGTATTTTTTTTTTTATATACTATGAGTCATGGCAAAAATGTTTTGAAAGCCACTTCTAAATAATACAGATGATAGTGCTTTGTATGACTCTGGAATAAAAACTGAAATGACTCAGTAATTTCAAAGGCTGATTTTTTTCCTGAAAAATTTTTAAGCTGTCTCATTAAGTTGTCTTAGTTCTTTGCTTTACTTTGGCAATAAAAACTCAACCTTGCTATGCATT EMBV3_20674 AGCCCCACTCTCAACGCCAAACTAACCTCTTCCACCAATACATTCCGTCTGAAGATGCTC Gene GeneID:613747|LOC613747:XM_002691626:305_cdna Constitutive 0 NULL GeneID:613747 11 GENE LOC613747 NULL similar to RIKEN cDNA 9130404D14 gene EMBV3_10205 TCCCTCAGCCAGCACTGAGCTAGTCATCAATTTCTGTAGTTCAGATTAACTGTAGATGAG Gene BVT0102_241466 + 0 NULL GK000005.2:84244575-84286530 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195768 TCONS_00195772 TCONS_00195778 TCONS_00195764 TCONS_00195773 TCONS_00195765 TCONS_00195766 TCONS_00195777 TCONS_00195776 TCONS_00195767 TCONS_00195775 TCONS_00195774 TCONS_00195769 TCONS_00195770 TCONS_00195771 1 XLOC_118138 Coding TCONS_00195772 XLOC_118138 Coding Coding RASSF8 5:84282876-84418089 j TSS145812 5472 1 TCONS_00195772_2 419 6 0.959574593970949 0.000925754681356838 0.00121474218460321 0.000150207437129956 0.000621875443479273 7.96184259234656e-10 0.000507299076073889 0.000979064062521448 0.00145457927915807 0.00130182204888232 0.000107371257189498 6.7777844942141e-06 4.11107538199289e-05 0.000158570448469208 9.06736142148196e-120 0.000387431361941904 0.00222577850361148 0.000370941475922703 0.00475373567718927 0.000453045327531997 1.08760794822542e-12 2.18615201952205e-07 0.00202781528037067 0.000537727606470475 0.00105483364082179 0.000243736024999081 0.000280666103046052 1.11253107915107e-06 0.000282653751703615 2.89364506184863e-05 0.000272527345903183 XM_005206936.1 RASSF8 PREDICTED: Bos taurus Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 (RASSF8), transcript variant X1, mRNA. 0.0 3240 100.00 0.328033625730994 NM_001164746.1 RASSF8 Homo sapiens Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 (RASSF8), transcript variant 1, mRNA. 0.0 5328 81.70 0.978983918128655 TCONS_00195772_2 sp|Q8NHQ8|RASF8_HUMAN RASF8_HUMAN Ras association domain-containing protein 8; 0.0 827 98.09 0.997613365155131 1 coding 0 0 0 0 0.255161443498314 0.542745231076913 -0.236919613982532 0.00517635672922967 ATTGCAGATTTTAGATTATAAGGTGCCTGCGTAGCTCCTCCTAGAATACCTGTCTGGTGCTCCGCCCTTCCTCAAGACTACCTCACACTGCTCCCAGCTGGGGACCCCAGCCCTAGAAGCTGACTACACAGTCTCTGCCTTTTCCGTGTTTTCGTGGCCAGAGACATGACCTGACAGCTTGATGACCAGTCTCAGGGCCCTCGGGTGACTGGCTGGGGCACCATGGAACTTAAAGTATGGGTGGACGGAGTTCAGAGGATTGTTTGTGGGGTCACCGAGGTCACAACTTGCCAGGAGGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAACTGGAAGGTACACGCTTATAGAAAAGTGGAGGGATACTGAAAGGCACCTAGCACCTCATGAAAACCCTATCATATCCTTAAACAAGTGGGGGCAGTATGCTAGTGACGTACAGCTGATCTTACGTCGCACAGGGCCATCTCTCAGTGAGCGACCCACGTCGGACAGTGTGGCTCGAGTTCCTGAAAGGACTTTGTACAGGCAGAGTTTGCCCCCCTTAGCTAAACTGAGGCCTCAGATTGACAAAACAATCAAAAGGAGAGAACCTAAAAGGAAATCATTAACATTTACAGGAGGTGCCAAAGGATTAATGGACATTTTTGGAAAAGGTAAAGAAACTGAATTTAAGCAAAAGGTGCTGAATAACTGCAAAACAACCGCAGATGAGTTGAAGAAGCTGATCCGTTTGCAGACGGAGAAGCTCCAATCCATTGAGAAAGAGCTAGAATCAAATGAAATAGAAATACGATTTTGGGAGCAAAAATATAATTCTAACCTTGAAGAGGAGATTGTCCGCCTGGAGCAAAAGATCAAAAGAAATGATGTAGAAATTGAAGAGGAAGAGTTTTGGGAAAATGAATTACAGATTGAACAGGAAAATGAAAAACAGCTGAAAGATCAACTTCAAGAAATAAGACAGAAAATAACAGAATGTGAAAGCAAGTTAAAGGACTATTTGGCTCAAATTCAGACTATGGAAAGTGGTCTTGAAGCAGAAAAATTGCAACGGGAAGTCCAAGAGGCACAAGTAAATGAGGAAGAGGTTAAAGGCAAGATCGGGAAGGTCAGAGGGGAAATTGACATTCAAGGCCAGCAGAGTCTAAGGCTGGAAAATGGTATTAAAGCTGTGGAAAGATCTCTTGGCCAAGCCACCAAACGATTACAGGACAAAGAACAAGAATTGGAGCAGTTGACCAAAGAGCTGCGGCAAGTCAACCTCCAGCAGTTTATCCAGCAGACAGGGACGAAAGTCACCGTTCTGCCAGCGGAACCCATTGAAGTGGAGGCCTTGCATGCAGACATAGAAAGGGAGGCACCATTCCAGTCCGGGTCTCTGAAGCGGCCTGGCTCCTCTCGGCAGCTCCCCAGTAACCTGCGTATTCTACAGAATCCTATCTCATCTGGTTTTAATCCTGAAGGCATATATGTATAACATTACCTGTCTTCAGGGTGGAGATCCAGTAAAGGTACCAAGGACGGTGAAGATTATTCCTCCTTTGATTTTGTGCCAATGATGAACAGAGGATCTGTTTCACAAGCCACCGTATCTTTTTTCTGTCCTAAGTTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTCACACATCCACAGTGTTGACGTTTTTGTCCAGCAGCTGTAATGCCAAGCCTTCATTTTTATTTGTAGCATTTTGAGAGCATTAGGAAAGTGTTATACAGTGTGCATACATAAATAAAACCGTGACTTAAGAGTGAAGAGAAATATGTGACTGACTTAGTTTATTTATTCCATGTAATCAATTAATGCGTGAATGTTGATGTTTTAATATTTTTTATTAATACTTATCCTGTGACTGAATTACATTATATACGGTGTGATAATGACTTTGTGTGCATGTCGCCAGACTCCACGCATTGCTGATTTACAGCTCCACAAGTGTCATAGGAGGCTCTGCCATTGTGAACCCATCCTAGCCACTGCTTAATTAGGTGAGAGAATTCAGGTTTTCTTTTTAATCTGAAGTTTAATCTTTCCTTTACAGTATTTCCAGCATAGGAATGACCGCATACAAAAATGGAAATATTTTCATGAAGTAAATTTTATATATATGTTTAAAATGTTTGCAGTGCTTCAGACACTGTTGAATAAAAATATACTTGTTGAATATCTCTCCAAACAGGCATGGGGTTTCCCATAACATGAGGTGTTTTGTTTCTGCCCTGCCTTTTATTTTAGTCTCATGGATCCTCAGAGTTGCCATAATAGACACATTAGAGATGTCTGAGGATATTTTCAGGAAGGTTGCTTTAAGTGATATATTTTTTAAAATAACCCACTTTGTATGTATGGTCTATTGCTGAAAGCACCCTGGATAAGTTATTGCTTGCACATAATTTACTGTGTACATTATAAACGGTTGCAATTTCTCCAGTCATTTAGACAGAAAGTAGATTGGAGTTAGGTACTTTTTACTAAGGAAATAAAGTTAAATTCAGTGTTCGTTTTCATTAATTTTCAGTTCGACTTTTACAGGACATGAAGCTCCCTTTGTGCATATATTTTCTTATTTATAAAATCAAAAATGAGTCAACACCCTTCCCATGAGTACTGACCTAACTGAGATGCACCAGATTATCTGGATGGATGTGGTCAGATACCTAGCCATTTTTACATTCCCTCTGATCAGAATTTGGTACAATATAATTTAGACTTTATTCTAAAATTTAAAATAGTTTTTAATTCTGAGGAAAACATATTGTCTGTATTATTGACATGCAACAGAATAACAGTGGGTTAGTATATTAATGCCATGGTAACAATAAAAAGATGTAAGTTATACGCTATGCATGAGGGCAACTTTGGATGTTTTAAACATATTTGACTTATTTTTGGTTTAATGAATGCTAAGAATGCTGCTATATTTAGGTTTCCAGTGAAAATTTTTAAGAATGGCTATGACAATATATAGAAGCTTCTGAACTGAAAGTAATAATGCATAGTTGCCTTTTCTAGTCCAGCTAAATGGCAGACCTCAACTAAAGATATTTTCTTTGGGTTCTTAGAATTATCAAGTTGACCTTGCCATTATACTGTTTTTCAAAAAAACTTGATAAATCAATGATTCTTACCTAATAACCACAACCTATACACATTTGCTCTCAGTTTGTAATAGTTATTTCATATCTATATATATTTAAAAATTAGAATTAAAAAATCAAAATAATTTGTAGATTTTCTGATAATAATGGTTTATGTATGCCCGATATATGCCTTATTTTTAAAAGGTTCCATTCTATACTGGGTCATTTTGTTATTGTTGTTCAGAGAATTGAGATCTTATTCACAAAGAAAAACAATTTTTATAAATTGATTACATTCTATTTAAATCAAAACGTTAAACTGAAGACATATTAGACTTTGCAATTTTTCATTGCAAAGATGCCTGGGCATACCATGAAAAACACAAAGTCAGGATCCAACTCAATTGTTGTCAGTTATTATCAGCATTAACCTAATAACTTTAAAGAAAGGCTGGCCGGATCCTGACAGTTCATCTGAATTTTCAAGCTGCCAAATAATCTTCACAGACCTAATTACAGATAGAAATACTATTTCCTAGATAAGAAGATTATATAAATGTGAATTTGATTAATACAATGAGCAACTGTACTTTTTAATCAGTTATATAACTTCTGGAAGTACATCTCTAAGAAATCTTTTCTAAGCCTTTTTTTAAAATAGAGGAAAGAAAACTCATCTCCCTAGAACATCTTAAAAATATCTTAGTCTATTTCTGATCATTTTTATCTATTGTAAATATAATGAGTTAGATTAGGTACCACATCTTTGGATATATTTCAGAGAGGGGAAGTGGGCACTGGTATGCAAAAATGCTAAATAGAAAATTTTGCATCTGGGGGAATATTCAGTTTCTGAATACTAAATTAGATTATAAGTTTTTTAAATTATTATTACACTGAAAGTTGTTTTATTGTGATTTTCTACAGGTATTAAGTACATTAGAAGATTTTTTTCCTTACCAAGGGATAATTTAAAATACTATTAGTATATTTGACCCTTTGGAGTGTTTGTCATCCTCAGAGAATGATCTGTAGTGGGTTGCCTCAGTCCTTTTTTTTTCTGATGAAATATTTTGGTTAGCTTTTTTTTTTTTCCCTGATGCATGGGGAATTTATATGTGAGATTTCAGTTGGTGTTAATAGGAGTTACCCAATTAATTAATTCCCTCAGCCATCACTGAGCTAGTCATCAATTTCTGTAGTTCAGATTAACTGTAGATGAGAGCTAAAACAAGACTAAGATAGTAAAAACACAGAACTTACAGTGTGAAATGTGAATATTAACAATGTGTAAGAAGAACAAAAAAGCACTCGCTTCCGGAACATAAATACGTGTTGTACCTGCACTAAAAGAATATTTTCTTTGTGAATAAGAGCAAAGTGGCCTTTCAAGAAAAGAAACGTCATTTAAATCCACTTCTGTGAACACCTTTCCAAGTTAGAACTATAATAACAGATTGAGGAAGTAACATGGAAAAGGAAAAAAAAACTCTTGACTTCAGGTGTGCAAAGGGCATGAGCAGATGGATGGTTCCCTGTGTACATTGCCTTGGAAAAATTGGGCCTTAATTTATATGTAAATAACAGTGCTGTGCTCGCATCCCTCTTCTACCTAAAGTTGTCTTTATTAGTCCATATGATATTAAAATTTAGCTCGTTAAGTCTTACTTTTATATTATGTCAGTTTTTTTTTAAGTTGCATGTTTATGCTGTTTGCTGCAGTGTTTTTCAGTTTGGGTTGAAGGCCATCAGCTGTATGGAGAAGACAAAACAATCACTATTGATTCAGTATTGCTGCTTTACGTTTCCAGAATAAGCTTTCGATGCCAGGACAGTGACTGCTTGAAAGCTGCAGGAGCTCTATTCCAATGCATTTTATATATTTTTAGAAACCAAATAAATGCAGATAACTATTTAGTATACTAATTATATTAAACCAGCAGAAATATAAAGGCAATAAAGTATATACATATATATATGGGGGGAGGGGAAAGGTTAAAAAAATAGGTTTACAGCCAGACGCAGTGATAAGCCCTAAATGTATTTCTCAATCTGTCTTTCTTTATTGACCCGAAGAGGATTTGAGTTGCTGCAGCTTTAAACAGAAAATTGCCATGTTCACCTACTATGAACCCATAAGTATGCTTTTAGTACTGCTTTGCTTATGTACAAGTAAAATACCTGTAATCTGTATTATATGTAATTATTTCTTTTCTTTTGACTGTCATTTCAAAATGTATATTTTCTGATAATTATCATGAGCTGTAAAACAAAGGATCAATATCTGATATTCTCCCAAATAATAAATTTTCAGGATTCACTGGGGCATTACAAT EMBV3_02113 ATATGCCTCCTTTTTAATAAGAACCCGTCCCTCCAGGACATGTAACCCTGCGCCACAGTG Gene GeneID:539601|FCHSD2:XM_002693439:82_cdna UTR3_Alt 2 NULL GeneID:539601 15 GENE FCHSD2 NULL FCH and double SH3 domains 2 EMBV3_40907 CATCTTGTCACTGGTTCTGTTCAAGCCAAGTCTTTGGAGCCACTGTTGAAAACCCTAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09814 TTTGGCAAGCGGAACTCTGCTCGGTATTGGATCTACTGTCCTTCGAGTCCTTGGGTGCAT Gene GeneID:615299|LOC615299:XM_002696073:414_cdna Constitutive 0 NULL GeneID:615299 19 GENE LOC615299 NULL similar to chromosome 17 open reading frame 53 EMBV3_05334 TGGGAAACCACAGGAATGTGATGAAATGGAACCAGCAGCAAAGAGATGCTATCTGGAAAG Gene GeneID:533115|MSH2:NM_001034584:140_cdna Constitutive 0 NULL GeneID:533115 11 GENE MSH2 MGC129013 mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) EMBV3_00885 TAGGGTAGCCTGGTGTGCTGCAGTCCACTGTGTCGCAAAGAGTTGGACAAGACTTGGTGA Gene BVT0101_036678 + 0 NULL GK000007.2:40409146-40445666 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220455 1 XLOC_133772 NonCoding TCONS_00220455 XLOC_133772 NonCoding NonCoding - 7:40441225-40443405 - TSS164453 2180 3 TCONS_00220455_9 94 0.80045871559633 1 0 0 0 0 0 0 0 0 0 0 6.0396233344211e-05 2.10016959698253e-06 0 0 0 0 0.000218077303714701 0 3.45287543491882e-06 0 0 0 0 0.000105206886815612 0 0 0 0 0 2.22688169870965e-06 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1463 80.90 0.714678899082569 0 noncoding 0 0 0 0 -1.96123858314817 0.0164928329319151 -0.26278385166713 0.0145136924285437 TTCAATGAACAATGCAAAAAAATACAGGAAAACAACAGAAGGGGAAAGACTAGCAATCTCTTCAAAAAAACTGGAAATGTCAAAGGAATATTTCATCCAAAGATGGGCACAATAAAGGACAGAAATGGTAAAGACATAATTGAAGCAGAAGAGATAAAGCAGAGAGGGCAAGAATACTCAGAAGAACTATATGAAAAAGATCTTAATGACCCAGATAATCCTGATGTGGGCACTCACCCAGAGCCAGACATCCTGGAATGAGAAGTCAAGTGGGCCTTACGAAGCACTGCTGCCAAAAAAGCTAGTGGAGGAGATGGAATTCCACAGAGCTCTTTCAAATCCTAAAAGATGAAGCTATCAAAGTACTGCATTCAATATGTCAGCAAATTTGGAAAATCCAGCAGTGGCCACAGGGCTGGAAAGGGTCAATCTTCATCCCAATTCCCAAGAAAGGCAGTATTAAAGAATGTTCAAACTACTGTAAAATTGTACTCATCTCCCATGCTAGTAAGGTTATGCTCAAAATCTTTCAAGCTAGGCTTCAGCAGTACGTGAACTGAGAGCTTCCAGATGTTCAAGCTGGGTTTAGAAAAGGCAGAGGAACCTCAGAGATCAAATTGCCAACATCTGCTGGATCAGAGAAAGCAAGGGAGTTCCAGAAAAATATCTACTTCTGTTTCATTAACTAGCTAAAGCCTTTGACTTTGTGGATCATAACAAATTGTGGAAAACTCTTAAAGAATTGGGAATACCAGACCACTTTTACCTGCATCCTGAGAAACCTGTTGTCAGGTCAAGAAGCAACAATTAGAACCTTACATGGAACAACTGACTGGTTCAAAATTGAGAAAGGAGTACAACAAGGCTGTATATTGTCACCCTGTTTATTTAACTTATATGCAGAGTACATCACGTGAAATGCTAGGCTAGATGAGTTACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAGCAACCTCAGATATGCAGATGATACCACCTTATAGCAGAAAGCAAAGAAGAACTAAAGAACCTCTTGATGAAGGTGAAAGAGGAAAGTGAAAAAGCAGGCTTAAAACTCAGTGTTAAAAAAACTAAGCTCATAGCATCCGGTCCCATCACTTCAAGGCAAATAGAAGGGGGAAAGGTGGAAGCATTGACAGATTTCCTCTTCTTGGGCTCTAAAATCACTGTGGATGGTGACTGCAATTAAGAAATTAGAAGGCAGTTGCTTCTGGGCAGGAAAGCTACAACAAACCTAGACAGTATATTAAAAAGCAAAGACATCATTTTGCCAACAAAGGTCCATATAGTCAAGGCTATGGTCTTTCCAGTAGTCACGTATGGATGCGAAAGCTGGACCATAAAGAAGGCTGAGCACCGAAGAATTGATGTTTTCGAATTGTGGTGCTGGGGAAGACTCTTGAGAGTCCTTTGGATAGCAAGGACATCAAACCAGTCAATCTTAAAGGAAATCAACCCTGAATACTCATTGGAAGGACTGATGCTGAAGCTCCAATATTTTTGCCACCTGATGCAAACAGCCGACTCATTGGAAAAGACCCTGACACTGGGAAAGATTGAGGACAGGAGGATAAGGGGGTGACAGAGGATGAGATGGTTGGATGGCATCACCGACTCAATGGACATGAATTTGAGCAAGCTCCAGGAGATGGTGAGGGCTAGGGTAGCCTGGTGTGCTGCAGTCCACTGTGTCGCAAAGAGTTGGACAAGACTTGGTGACGGAACAGAAAAGTATGTTCACTTTCATCTGTTGTTTGATCTAACTTTCTTCCTGTTTTCACCATGCTACACTTATCTTCCCGATTCCTTTCTTTTTCAAAGTCTCTGTCTTACAGTGTTATATATTCATGGGTAGTGGATTATATGTTAAATTATATTGAAATCCTTTATACATTTGCATCTTTATAGGCTCTATTGCCCCAAACTGAAATTTCTTCCCTACTCTTCCCATATTCAAACCATTTATCTTTCAATGTTTTCCTTATGTACTGTTTCCTTTATAAAGATCTTGGCATCCCTCTTCCTATTCATCCATCCATCTACCCAGGTCTCACCCCATACTGAATTCTGAGAGCTCTGAGTACCCCATTTGTTAGATCACCTAGAATCTTATCATATGTGCATGTCTTGCTCTCTGTTGTGGGTTGAATGGTGAC TCONS_00216635 TCONS_00216636 . 3' 1482 TCONS_00216635 TCONS_00216636 . 3' 3661 EMBV3_40868 ATGAAGCACTCATGTGGGGCGGATCTTTTCGATGACCCCTGCTACATCAATACACAGGCT Gene GeneID:524734|SHC4:XM_002690933:254_cdna Constitutive 0 NULL GeneID:524734 10 GENE SHC4 NULL SHC (Src homology 2 domain containing) family, member 4 EMBV3_22744 GGGAGATCCAGCTCAGCGTCGTGCAGACCGCATTTCCGGAAAAAGCGACGGGCTGAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27506 GGCCGGGGAGTATGGAGCGGTCACTGACAGCTACCCGTGTACCCTGCGCCAGTACCTTCG Variant GeneID:510683|PINK1:NM_001099701:126_cdna 814^996 2 EMBV3_27178 GeneID:510683 2 GENE PINK1 NULL PTEN induced putative kinase 1 EMBV3_41010 CTACGAGGAGTTCATGCAGGTGGTGGAGCAGCACAGTGACAAGACCATTTTCGCCTACTT Gene GeneID:404159|TXNDC17:XM_002695766:243_cdna Constitutive 0 NULL GeneID:404159 19 GENE TXNDC17 TXNL5 thioredoxin domain containing 17 EMBV3_27946 ACTGATTCCCAAGGCAAGTGGTTCTGCTCAATTACAGGTGCTGCCACAGGCTTTGTCTAC Gene GeneID:789501|BOSTAUV1R424:XM_002695400:309_cdna Constitutive 0 NULL GeneID:789501 18 GENE BOSTAUV1R424 NULL vomeronasal 1 receptor bosTauV1R424 EMBV3_36583 GCCTTACACATTCCTTACAAATAAACCAACCGACACAGCGTTATCCGGGCCCAACTTCGG Gene GeneID:505941|LOC505941:XR_084574:167_cdna Constitutive 0 NULL GeneID:505941 13 PSEUDO LOC505941 NULL similar to KIAA1398 protein EMBV3_15998 CCCCACTGAAAGGGGGGCATCCTCCTGCAGTGCCACTGCAAATGTTGCCAAAATACAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36768 GCCATGCTGGACAACAGCTTTGAGAGGCTCCTGCTTCACGCCATCTGCCAGTACATGGAT Gene GeneID:614948|C7H19orf22:NM_001046548:95_cdna UTR3_Alt 2 NULL GeneID:614948 7 GENE C7H19orf22 C19orf22 MGC137387 R3H domain-containing protein C19orf22 homolog EMBV3_38175 CTTCGTGAGGAACGTGGCCGACGATACCAGCTCCAAATCAGATGAAAGCCAAGGAAGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18304 AAAACAATAATTCAGAACCCGCCCCTCCCCCCGGATATTCAGAATCGCTTCATGTGGGAG Gene BVT0102_093317 - 0 NULL GK000025.2:22278776-22459387 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144777 TCONS_00144776 TCONS_00144775 1 XLOC_088645 Coding TCONS_00144775 XLOC_088645 Coding Coding RBBP6 25:22458387-22493835 j TSS108626 6713 1 TCONS_00144775_9 1763 0.0102785639803367 17 0.811098259373149 8.28447507147808e-05 9.26794136343565e-05 0.000106665569030673 7.05641611507595e-08 4.54058243219089e-05 3.28389400581685e-05 2.67948794128086e-05 4.31339924482325e-05 7.76195639715403e-07 0.00172787003911929 0.00115672224148167 0.0019811229474737 0.000711181824156634 0.00354348869134111 0.00178894058066234 0.00436643374449838 0.000531447775962945 0.00695339108290772 2.785392238989e-05 0.00020031567695858 0.000176710065313203 0.000559169724854555 0.00234626871140895 0.0015369007840838 0.000240332133222458 0.000216171095079746 0.000182358958114802 0.00129799024179334 0.000800849988153552 1.20705013964688e-08 XM_005224806.1 RBBP6 PREDICTED: Bos taurus retinoblastoma-binding protein 6 (RBBP6), 0.0 1.211e+04 100.00 0.999702070609266 NM_018703.3 RBBP6 Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript 0.0 9404 91.16 0.999702070609266 TCONS_00144775_9 sp|Q7Z6E9|RBBP6_HUMAN RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6; 0.0 1113 98.73 0.311401020986954 3 coding 0 0 0 0 0.00994594170254842 0.92792230775814 -0.0962687644321205 0.623841909524824 GGGCGAAACAAAACAGGGAGCCGGCGGAGCCCTCGCCGTTGCTCGGCGGTTTCCGGGCTTAATCTCGCGGTACTGGGCCGAGAGGCGACGGAAGCGAAAGGCGAGAGAAGCTCGGAGCACTCGGCGAGAGGAAGCGTCAGGGAGCCTTCGGCGGCGTCGCGAGGGTCGGCCGAAGCCCCCCGGCCGCTGGCTGGGGCCCGGGGTGGTGAGGAAGTGCTGCGAGGCCTAGCCGAGGCCTAGTACCGGCTTTGTGTCTGAGCGGCGTTGGCGTTGGCGTTGGCGGCGGCGGCGGCGGCGGCGGGGGGGAGGCGGAGCCGGGGGCGGCCTGCGGGAAGGCCTCTCCTCCGCCGACCGCGCGTTTCGGCCTAGGCCGCGGGGCCGCCCGTGGCCCTGCGGGGAGCAGGCGAAAGGGGTCTGTTGCGTGGCGGGGGCCTGGGCCTGGGGCAGCCGACGCCGGTCGTCCGGAAGCCAGGAGGAGGCGAGAGGCCGCTCGTGGACTCCGGGCCTAGGCCCTCTCCCCTCTGCCTTCTCCCGGGGCCTGGGTCACCCCCATCCACGGAGAAAGAGACCATCCGGGAGGTGCGGCCGCGCTATGGACCCCTGACCCCACGGGGTCACTTGGACTCTTAACGTGTGGACTGACCGCTACTGACTGCACCGCTGCCCCTGTCTCCTGCCGGCCCTTAGCATGAGCGAGAGGGACCCAGCCGGGTGACATTGTGCCGGTTGGCGGATTCTCGCTTGCCCCCTTGCCCCGTCCTCGTCCGCCTCCTCCCACATGAAGCGATTCTGAATATCCGGGGGGAGGGGCGGGTTCTGAATTATTGTTTTTACGAACCCCTGCTTGTGGTTGGGGGGGTATTTAATCTGAGGCTTTTTAGGGTCCTTCGGTGTCTCTGAGTGTTTTGTGTGTGTACATATTTTGCTCCTAAGTTTATAAATATACATATATTGAGCGTGTCCACGTCTCCTCGCTGAACCTTAGGAATCCTTTGGCACCATGTCCTGTGTGCATTATAAATTTTCTTCTAAACTCAACTATGATACCGTCACCTTTGATGGGCTCCACATCTCCCTCTGCGACTTAAAGAAGCAGATTATGGGGAGAGAGAAGCTGAAAGCTGCCGACTGCGACCTGCAGATCACCAACGCACAGACGAAAGAAGAATATACTGATGATAATGCTCTAATTCCTAAAAATTCATCTGTAATTGTTAGAAGAATTCCTATTGGAGGTGTTAAATCTACAAGCAAGACATATGTTATAAGTCGAACTGAACCAGTGATGGGAACTTCAAAAGCAATTGATGACTCTTCTGCGTCTATTTCTCTGGCCCAGCTTACAAAGACTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGATAAAATTAAAGCAATGATGTCGCAATCTGGCCATGAATACGACCCGATCAATTACATGAAGAAACCTTTAGGTCCACCACCTCCATCTTATACTTGTTTCCGTTGTGGTAAACCTGGCCATTATATTAAGAATTGCCCAACAAATGGGGATAAGAACTTTGAATCTGGTCCTAGGATTAAAAAGAGCACTGGAATTCCCAGAAGTTTTATGATGGAAGTGAAAGATCCTAACATGAAAGGTGCAATGCTTACCAACACTGGAAAATATGCCATACCAACTATAGATGCAGAGGCATATGCAATTGGGAAGAAAGAAAAACCACCTTTTTTGCCAGAGGAACCATCATCATCTTCAGAAGAAGATGATCCTATCCCAGATGAGTTGTTGTGTCTCATCTGCAAAGATATTATGACTGATGCTGTTGTCATTCCCTGCTGTGGAAACAGTTACTGTGATGAATGTATAAGGACAGCACTCTTGGAATCAGATGAACATACATGTCCAACATGTCATCAGAATGACGTCTCTCCTGACGCTTTAATTGCCAATAAGTTCTTACGACAGGCTGTTAATAACTTCAAAAATGAAACTGGTTATACGAAAAGACTAAGAAAACAGTTACCCCCACCCCCTCCCCCAATACCACCTCCAAGACCACTCATCCAGCGGAACCTACAGCCTCTGATGAGATCTCCAATATCAAGACAGCAAGATCCTCTGATGATTCCAGTGACATCTTCATCAACTCACCCGGCTCCATCTATGTCTTCACTAACCTCTAATCAGTCTTCTTTGGCCCCTCCTGTCCCTGGAAATCCATCTTCTGCCCCAGCCCCCGTACCTGATATAACTGCAACAGTCTCCATATCAGTCCACTCAGAAAAATCAGATGGACCTTTTCGGGATTCAGATAATAAAATACTGCCAGCTGCAGCACTTGCATCAGAACATTCAAAGGGAGCTTCTTCAATTGCAATTACTGCTCTTATGGAAGAGAAGGGTTACCAGGTGCCTGTACTTGGAACCCCCTCTTTGCTTGGACAGTCATTATTGCATGGACAATTGATCCCCACAACTGGTCCAGTAAGAATAAATGCTGCTCGTCCAGGTGGTGGTCGACCAGGTTGGGAACATTCCAACAAACTTGGATACTTGGTTTCTCCACCACAGCAAATTAGAAGAGGAGAGAGAAGCTGCTACAGAAGTATAAACCGTGGACGACACCACAGCGAAAGATCACAGAGAACTCAAGGCCCGTCACTGCCAGCAACTCCAGTGTTTGTGCCTGTCCCACCCCCTCCCTTGTATCCGCCTCCTCCCCACACACTTCCTCTCCCAGGTGTTCCTCCACCACAGTTCTCTCCTCAGTTTCCTCCTGGCCAGCCACCACCTGCTGGGTATACTGTTCCCCCTCCAGGGTTTCCTCCAGCTCCAACCAATTTATCTGCACCTTGGGTGTCATCTGGAGTACAGACTGCTCATTCTAATACCATCCCAACAACACAAGCACCACCTTTGTCCAGGGAAGAATTCTATAGAGAGCAACGACGACTAAAAGAAGAGTCCAAGTCTCCCTATAGTGGTTCATCCTATTCAAGAAGTTCATATACTTATTCTAAATCAAGATCTGGTTCAACGCGGTCACGTTCTTATTCTCGATCATTTAGCCGCTCACATTCTCGTTCCTATTCACGATCACCTCCATACCCCAGAAGAGGCAGAGGAAAGAGTCGAAACTACCGTTCACGGTCTAGATCGCACGGGTATCATCGATCTAGGTCAAGGTCACCTCCATATAGACGGTATCACTCACGATCAAGATCTCCTCAAGCATTTAGGGGACAGTCTCCTAATAAACGTAATGTACCTCAAGGAGAAACAGAGCGTGAATATTTTAACAGATTCAGAGAAGTTCCACCACCTTATGACATGAAAGCTTATTATGGGAGGAGTGTTGACTTTAGAGACCCATTTGAGAAAGAACGTTATCGAGAATGGGAGAGAAAATATCGAGAGTGGTATGAAAAGTATTACAAAGGCTTTGCTACTGGAGCACAGCCTAGACCATCAGCAAATAGAGAGAACTTTTCTCCAGAAAGATTTTTACCACTTAACCTTAGGAATTCTCCCTTCACAAGAGGCCGCAGAGAGGATTACTCTGGTGGACAGAGTCATAGAAGTCGAAATGTAGGTGGCAACTATCCAGAAAAGCTTTCATCGAGAGACAGTCACAATCAGAAGGATAATACAAAGTCAAAAGACAAGGAAGGTGAAAATGCTCCAGGAGATGGTAAAGGAAATAAACATAAGAAACATCGAAAAAGAAGAAAGGGGGAAGAAAGTGAAGGCTTTCTGAACCCAGAGTTACTAGACACTTCTAGGAAATCAAGAGAGCCTACAAGTGGTGAGGAAAATAAAACAGACTCATTGTTTGTTCTCCCAAGTAGAGATGATGCTACACCTGTTAGAGATGAACCAATGGATGCTGAATCCATTACTTTTAAATCAGTGTCTGAAAAAGACAAGAGAGAAAAAGATAAACCTAAAGCAAAAGGTGACAAGACCAAACGGAAAAATGATGGATCTACTGTATCCAAAAAAGAAACTGTTGTAAAACCTGCTAAAGGACCCCAAGAAAAACTAGATGGAGAGCGTGAAAAATCTCCTCGATCTGAACCTCCACTTAAAAAAGCCAAAGAGGAGACCCCGAAGACTGACAATGTGAAATCATCATCTTCCTCTCAAAAAGATGAAAAGACGGTTGGTACCCCCAGAAAAGCTCACTCAAAGTCAGTAAAGGAGCACCAGGAGACAAAACTAGTCAAAGAGGAAAAAGTGAAGAAGGACTACTCCAAAGACATCAAGTCAGAGAAGGTAGCTAGTAAGGAAGAAAAGGCCAGGAAGCCTAATGAGAAAAGTAAACCACTTGATAGCAAGGGAGAAAAAAGGAAGAGAAAAACTGAAGAAAAAAGTGTAGATAAAGATTTTGAGTCATCTTCAATGAAAATCTCTAAATTAGAAGTAACTGAAATAGTGAAACCATCACCCAAGCGCAAAATGGAGCTTGATATTGAAAAGATGGATAGGACACCTGAAAAAGACAAAATTTCATCATCAGCTGCTCCAGCCAAAAAAATCAAGCTTAACAGAGAAACTGGTAAAAAAATTGGAAGTACAGAAAATGTATCTAACACAAAAGAACCCTCTGAAAAATTGGAATCAACATCTGGCAAAGTGAAACAAGAAAAAGTCAAAGGAAAGGTCAGGCGGAAAGTGACTGGAACTGAAGGATCCAGCTCAACACTTGTGGATTATACCAGTACCAGTTCAACTGGAGGCAGTCCTGTGCGGAAATCTGAAGAAAAAACAGATACAAAGCGAACTGTCATTAAAACAATGGAAGAATATAATAATGACAACACAGCTCCTGCTGAAGATGTTATTATTATGATCCAGGTTCCCCAATCCAAATGGGATAAAGATGACTTTGAATCTGAAGAAGAAGATGTTAAATCCACCTCACAGCCTATATCAAGTGTAGGAAAACCTGCCAGTGTTATAAAAAATGTTAGCACTAAACCACCAAATGCAATCAAGTATACTGAAAAAGAAAGTGAATCATCAGAGAAAATTCAGAAACTCGCCAAGGAAGTGAGCCATGAAACTGCACAGCATGAGGTCAAAAGTTCAAAAAACTCTGCATCTAGTGAAAAAGGGAAAACCAAAGATCGAGATCACTCAGTATTGGAAAAGGAAAACCCAGAAAAGAGAAAGAACAACAGCACTCAGCCAGAGAAAGATAGTAATCTGGACCGTCTGAATGAGCAAGGAAATTTTAAAAGTCTGTCTCAGTCTTCCAAAGAGACTAGAACTTCTGGGAAAGAAGATAAGCATGATTCCGTTCGAGGGTCCTCAAATAAAGACTTCACTCCCAACAGAGACAAAAAAACAGATTATGACAACAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAAGGAATGAATTAACAAGAAGAAAAGACTCTCCTTCTCGGAGTAAAGACTCTGCATCTGGACAAAAAACTAAGCCAAGGGAGGAGAGAGATTTGCCTAAAAAAGGAACAGGAGATTCCAAAAAAAGTAATTCTAGTCCCACGAGAGACAAAAAACCTCATGATCATAAAGCCACTTATGATACTAAACGCTTAAGTGAAGAGACAAAATCTGTAGATAAAAATCCCTGTAAAGATCGTGAGAAACATATGTTAGAGGCAAAGAACAGTAAAGAGTCAAGTGGCAATAAATCACTTAGTATACTTAACCCACCTGACCCACAGATTGAGAAAGAGCCAGTTACTGGGCAAATTGATAAGAACACCATCAAGCCTAAGCCCCAGTTAAGTCACTCCTCTCGACTGTCCTCTGACTTAACTAGAGAAACTGATGAAGCTGCTTTTGAACCAGACTATAATGAAAGTGACAGTGAAAGCAATGTGTCTATAAAAGAGGAAGAAACTGCAGGAAAGGTTTCTAAAGAACTGAAAGATAAAGTAGTGGAGAAAGCAAAGGAGAGCCTGGACACGGCAGCAGTCAGCCAGGCAGGCGTCACCAGGAGCCAGAGTCAGAGCAGCCCGAGTGTCAGTCCAAGCAGAAGTCACAGCCCTTCTGGAAGCCAAACCCGGAGCCACAGCAGCAGTGCCAGCTCTGCAGAAAGTCAGGACAGCAAGAAGAAGAAGAAAAAGAAGGAAAAGAAAAAGCACAAGAAACATAAAAAGCATAAGAAGCATAAGAAGCATGCAGGCACTGAAGCAGAATTGGAAAAAAGCCAAAAACACAAACATAAGAAAAAGAAGTCAAAGAAGAGCAAAGATAAAGAAAAGGAGAAGGAGAAGGATGACCAAAAAGTGAAATCTGTCACTGTGTAGAAGGGCAGATTTTTAAAAATTGACTTAATTCCTAAGTCATCTGTATTAAATTTTGTTATAATGTAAAGAGATTCAAGCCTTGTAAATAATGATACGGAAGACCCTGTGCTGCACTTAAAATATTGCTGCTTGATTATTTGATTTTTACATCAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCATTAATTAGTTGGGGTGGAGTTTACTGTACTGTGAAATTTTCACATTTGAATTTTTTTAATTGCCTGGCAAAAGCTGATATCAGTTCTAAAATATCAGCAGAATGATTTGCTGAATTCATTACAACCCTGTTATGTCACTTTTTGATTACAATAAAAGTTTTCAGTAAACTTTTCAAAT EMBV3_28408 GCAGCTTCTTGTCATGGCCGGACGCTTGCATCAGCTGGATATCCTTTTGAGAAACTGAAG Gene GeneID:523223|PSTPIP2:NM_001101112:122_cdna Constitutive 0 NULL GeneID:523223 24 GENE PSTPIP2 NULL proline-serine-threonine phosphatase interacting protein 2 EMBV3_22068 GTGCAAAAAAGATTGTGTCCGGAGCTGGGGGCATGAAGAACTGGGTAAAATGGAGGTTGC Gene GeneID:540048|LYZL6:NM_001046466:275_cdna Constitutive 0 NULL GeneID:540048 19 GENE LYZL6 MGC137194 lysozyme-like 6 EMBV3_10385 CTGGGACCACAGGTGGAGCCTGACTTTCTCTAAGGATTTGCACTTCGGTTTTGAAGGAAG Gene GeneID:282214|CYP3A28:NM_174531:56_cdna Constitutive 0 NULL GeneID:282214 25 GENE CYP3A28 CYP3A4 MGC137166 cytochrome P450, subfamily IIIA (niphedipine oxidase), polypeptide 4 EMBV3_01498 TACTTGGTCTTCTGGGCATTCCTGCTGGTCTTCAGCTTCATCTCGGAGCCCATGGTGTGT Gene GeneID:100126273|SLC7A10:NM_001104989:480_cdna Constitutive 0 NULL GeneID:100126273 18 GENE SLC7A10 MGC159950 solute carrier family 7, (neutral amino acid transporter, y+ system) member 10 EMBV3_17567 CTGCCACCTGGCCATAGTCCCAAGTCATGCTGTGGTCTCGAGGAAAGATAAGGCAGATTT Gene GeneID:525947|LOC525947:NM_001046279:28_cdna Constitutive 0 NULL GeneID:525947 1 GENE LOC525947 MGC128785 serotransferrin-like EMBV3_35814 ATGGGCTCAACCCCTTCCTATTTTCATGTCTGCCAATCCCTGTAACCTCACTGATCCTCC Gene GeneID:512872|RASAL1:XM_002694515:424_cdna Constitutive 0 NULL GeneID:512872 17 GENE RASAL1 NULL RAS protein activator like 1 (GAP1 like) EMBV3_21586 TGGCAACCAGACACTCTCCTCAATTCCACCACAACGAGTTCACCCAAAAGGCTGGCAACA Gene GeneID:615983|LOC615983:XM_002699688:28_cdna Constitutive 0 NULL GeneID:615983 X GENE LOC615983 NULL similar to heat shock transcription factor, Y-linked EMBV3_29557 TTCCCCTTTCCGAATTCCCCGCACCAGTTCACACCAGCAACTGAGATTTAGGCCTGTTTT Gene BVV0102_230907 + 0 NULL GK000021.2:39657965-40528024 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119376 TCONS_00119374 TCONS_00119371 TCONS_00119373 TCONS_00119375 TCONS_00119377 TCONS_00119370 1 XLOC_072885 Coding TCONS_00119374 XLOC_072885 NonCoding Coding LOC100847655 21:39674081-39680442 j TSS89414 570 3 0.910849056603774 0.0010520148929411 0.00369971655278314 8.18262939321661e-09 0.000906327715120711 0.00155754163568975 4.9569313169503e-40 0.000822445850095485 0.000314180227371494 0.000762213179175214 7.2128090789807e-05 0 0 1.28336823988693e-09 5.89076518843541e-20 9.84525915867744e-06 0 0 0 0.0029857385013101 0.00234799759424637 0.00162103162804605 0 1.60805356916417e-05 0 0.00411363407339239 0.00331901248488724 0.00294528103860007 0 0 0 XR_229250.1 LOC101905308 PREDICTED: Bos taurus uncharacterized LOC101905308 (LOC101905308), 0.0 964 100.00 0.935087719298246 NR_026731.1 C14orf23 Homo sapiens chromosome 14 open reading frame 23 (C14orf23), 1e-22 111 84.16 0.175438596491228 0 noncoding 0 0 0 0 -1.73581691604548 0.00165321047077809 -0.0960615423905655 0.102191455085882 CCTGCCCAGGCCCATTTCTCCCGCGCATCCCAGGTCACCTTTCCCCTTTCCGAATTCCCCGCACCAGTTCACACCAGCAACTGAGATTTAGGCCTGTTTTCCTGAAGGGCCTCAGCCAGTCCCTGCACTTAGTAGGCATGCAATAAACCTTGAAAGCCCAAATGAATGATGCTGCTTCCCTAGGCACATGGTACTTAGGGGTGAGATTTCTCACATAGGTCAGTTCGATGAAGCTTGATGGCAACAGTTGTTCACTTTGAATCAAAGAATAACTCTTAATTGGTGTGCTGTCATCAACCAGAAGTTTCCAAGTATGTGTCCTCCAATTCAAAGAGAAGAAGCTGGATGCAAGCAAACATACTCATGGTGACTCTCTGCACATGATGCATCTCCAGAGAAAGTTGCTTCAACATTCTTTTTTGTTTTCGGAACACTTCTTACAATATACCCCAACTACTGCATAGCATCCTAAGTTCATCCAGATTTGTCCCAGGTCTGAATTCTTGGTCTTCCTGCCACCCTCTAATTCCACAGATAAAGAAGAAATAATAATAAAGGAATAAAAATCGT EMBV3_09952 ACCTTGGAGGGTGAAGCTGTGCCTTGGGACTTTGCCCTTTCTGGTCAGGACAGAGAATAA Gene BVT0102_185687 + 0 NULL GK000010.2:16308716-16324342 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27113 GCCTGACTTGGTCATCGGATTTAACTCTGGCTTTGGACTAAAGGACACTTGGCTGAGCTC Gene GeneID:539735|ZMYND15:XM_002695775:269_cdna Constitutive 0 NULL GeneID:539735 19 GENE ZMYND15 NULL zinc finger, MYND-type containing 15 EMBV3_40536 GCCTGAGCTTATGGGGGCTTTGGAAACCTCTGGCTTCACTGGTGCAGAAAATACTCCTCT Gene GeneID:524622|NELL2:NM_001102084:75_cdna Constitutive 0 NULL GeneID:524622 5 GENE NELL2 MGC166235 NEL-like 2 (chicken) EMBV3_36276 CAAGAAGTCCGTGGACAAGAACAGCAACGAGTACCGGGTGCGGCGCGAGCGCAACAACAT Gene GeneID:281677|CEBPA:NM_176784:505_cdna Constitutive 0 NULL GeneID:281677 18 GENE CEBPA MGC151891 CCAAT/enhancer binding protein (C/EBP), alpha EMBV3_00892 TTACCTTCGTCATCACCGTCATTGTCGTCGCTTGTATCCTCCAACAGCCTAAGGGAGAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06444 AAGGTCAACCAGATCATCAACAACTGCATCGACGCCCTCAAGGCCGAGGCCACCTCCTTC Gene GeneID:618774|ELFN1:XM_002698233:845_cdna Constitutive 0 NULL GeneID:618774 25 GENE ELFN1 NULL extracellular leucine-rich repeat and fibronectin type III domain containing 1 EMBV3_14087 TACATTATAGGGATTTCCCCGCTGTGGGCCAGTTTAGTGGTTGAGGATCCACCTTCCAAG Gene BVT0101_016206 + 0 NULL GK000025.2:2133829-2179223 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147649 1 XLOC_089536 NonCoding TCONS_00147649 XLOC_089536 NonCoding NonCoding - 25:2146200-2147229 - TSS110184 1029 1 TCONS_00147649_2 140 0.49757045675413 1 0 0.000317333142668847 0.000410140225444464 0.000728449300421859 0 0.000293365893155842 3.47624638752863e-06 0.000130349211494794 5.74802866698601e-06 2.30033412897868e-05 0 4.44933102924378e-06 0 1.39420803081952e-06 0 0 0.00100102497443295 0 4.87675295480046e-05 0.000571443593556582 0.000248101328318575 0.000106206264730511 0 2.67464916804169e-05 0.000293258840143149 0.000289527399194885 6.84690185731739e-05 3.75288053968652e-05 0.000154019112976908 8.96382526027175e-05 8.3468664738956e-07 XM_003581785.2 RIPPLY3 PREDICTED: Bos taurus ripply transcriptional repressor 3 (RIPPLY3), 8e-104 381 85.59 0.321671525753158 0 noncoding GTGAGGGCTTCTCTTGTAGTGGGGCACAGGCTCTGGGGTGCCCCGGCTCAGTAGTTGCAGTGACCAGGCTTAGGTGCCACCTGGCGTGTGGGATCTAAGTTCCCTGACCAGTGATGGAAACTGCAACCCCTTCCCCTGCCTTGGAAGGTGGATCCTCAACCACTAAACTGGTCCACAGTGGGGAAATCCCTATAATGTAATTTTTAACAATGAGTTTTAAAAGATAAGACTGTATTGCACACCCAACTTGCAAAACTCAACATATTCTCTCCTCCCATTTTTTATTTTATTGTTGTTCAGTCGCTCAGTCACATCCGACTCTTTGTGACCCCGTGGACTGCAGCATGCCATGCTTCCGTGTCCTTCACTACCTCCCAGAGTTTGCTCAAATTCATGCCCATTGAGTCAATGATGTCATCCAATCATCTCATCCTCTGTGGCCCCCTTCTCCTCCTGCCCTCAATTTTTCTCAATATCAGGGTCTTTTCCAATGAGTCAGCTGTTCGCGTCAGGTGGCCAAAGTACTGGAGCTTCAGCTTCAGCATCAGTCCTTCCAATGAATAGTCAGGGCTGATTTCCTTTAGGATGGACTCCTTTGATCTCCGTGCTGTCCAAGGGTTAGCGTGTACATTTTACTTCCTCCACCGGGCGGGGAAACAAAGGCGGGAGGAGGCATGCGGCTCCGTGGGAAGCAGAAAGCCGGGCTGGAGTCCCCCAAACGGCCACGGGGTGCGCCAGACACAATCTGATCGGCAGCTCAGGCCGGAGGCAAGCCGGGCTGGAGTCCTTCAAACGGCCACCTGGGGGCGCCAGACACAATCTGATCGGCAGCTCAGGCCCGAGGCAAGCCGGGCTGGAGTCCCTCAAACGGCCACCTGGGGGCGCCAGACACAATCTGATCGGCAGCTCAGCCCAGAGGCCCTTGGGGTCCGCGGCCGCTGCTGGGCTCCTGGATCATGGAGGCGCTTTTCCTTGTATTTCGGGCTCATCCAGGACCAGGGCCGCTAGCAGGGGTCTCGAGGCACGGAG TCONS_00145919 . 5' 12373 TCONS_00145919 . 5' 12373 EMBV3_40161 TTCGGAATAGGAGGGAACGAGAAGTGTACAGGGGAAAAGCCATGGTTAGTACTCTCATGA Gene BVV0102_052043 + 1 EMBV3_08681 GK000005.2:46333944-46719642 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41103 GGCTGCTGACTACAAGAATAAGAAATTGGATTTGGATGCATTGGTGACCCATACCCTACC Gene GeneID:520508|ADH4:NM_001102059:11_cdna Constitutive 0 NULL GeneID:520508 6 GENE ADH4 MGC148358 alcohol dehydrogenase 4 (class II), pi polypeptide EMBV3_17150 CTTCCTATACCACCCTCCCTCCAAATGCACAGACTCAAAGATGCCTCAGATTACAAAACC Gene BVT0102_127684 + 1 EMBV3_17512 GK000002.2:22139879-22243525 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28203 TTTCCGTGGAGAGAAGAGTAACTGCTGTAGGAATATATCGGCAAAGGCTGTAGGAGCGCC Gene BVT0102_406749 + 0 NULL GK000016.2:57731148-57788140 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11555 AGAGAGTAATAACTGTGGAGCAGATGGCCTGACTTCAAATCCCAGCCTCGCCACTCCCTA Gene BVV0102_126311 - 1 EMBV3_20075 GK000013.2:22496406-22813837 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23341 GTGGGCTTGGGAGGCTGGAGCTCCGCGCCTGAGAGGAAAATTTATTGGAGGAAGTTTACT Variant GeneID:100337241|LOC100337241:XM_002685273:97_cdna 346^754 1 EMBV3_40239 GeneID:100337241 2 GENE LOC100337241 NULL hypothetical protein LOC100337241 EMBV3_16587 TTCTTCTTCGAGAACTACACCGGGGTGCAGGCCTTCCAGTATTAAAACATGTGCTGACAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20937 TCCTGCGCAACCTGAGGTAGCACTGAAGAGGGTCCCCAGCCCTGCCCCAGCCCCCAAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01795 CACTGTCTGTTACAACACGAACTGTTGTGGGTTCCCGCCAGGCTTGAAGAAAATGATCTG Gene GeneID:506402|CHD4:XM_002687870:121_cdna Constitutive 0 NULL GeneID:506402 5 GENE CHD4 NULL chromodomain helicase DNA binding protein 4 EMBV3_11332 ACTGGCTGCTGCGCCGTGTACAGTTATCAAACACGTTGTAGGGCTTTTCTTCCAGGCGTT Gene BVT0102_128948 + 1 EMBV3_05153 GK000022.2:59691107-59694216 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01263 GCTAATATGTTGGTAACATCCTCTCTGTTGAAGAATGACCCCTCCAAACCTGTTGGCCGG Gene GeneID:327677|CD38:NM_175798:7_cdna Constitutive 2 NULL GeneID:327677 6 GENE CD38 NULL CD38 molecule EMBV3_04482 TGAGTGAGTTCCTGAGACATCCTCTTTTGGAGGTGGGGGGTCTAGCTGGAAGAACTTCAA Gene GeneID:506219|ABAT:NM_001081581:75_cdna UTR3_Alt 2 NULL GeneID:506219 25 GENE ABAT GABA-AT GABA-T L-AIBAT MGC137464 4-aminobutyrate aminotransferase EMBV3_12668 TCAGACTGCACAGCGCAAGATCAGGGAAATTGTACAGCAGGTGAAGCAGCAGGAGCAGAA Gene GeneID:519028|IGF2BP2:XM_002684844:198_cdna Constitutive 0 NULL GeneID:519028 1 GENE IGF2BP2 NULL insulin-like growth factor 2 mRNA binding protein 2 EMBV3_04883 CTAATAACCAGCTGCAGTTCCTACCTCCAGTACCTCACTGTGGACCGAAATCGTCTATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25942 GTCACCCGCACGTCGCGCCGCTGCCCCGCAGAAATGCTTCGATTACCCGCAGTCCTTCGT Variant GeneID:511913|HSPD1:NM_001166608:97_cdna 97^356 1 EMBV3_20571 GeneID:511913 2 GENE HSPD1 HSP60 heat shock 60kDa protein 1 (chaperonin) EMBV3_27740 AGCAAGACAAGCTGCCCAGTCCCATCAACCTTAAACCCTCGTAGGGGAGAAAGACACACT Gene GeneID:617677|CCDC48:NM_001146692:47_cdna Constitutive 0 NULL GeneID:617677 22 GENE CCDC48 NULL coiled-coil domain containing 48 EMBV3_02931 GGAAGGCAACACAGCCAGAAGACGAACCAAAAGCAGCAACCCCCAGAAATCAAGCAGTGT Gene GeneID:100296236|LOC100296236:XM_002692482:566_cdna Constitutive 0 NULL GeneID:100296236 13 GENE LOC100296236 NULL similar to WAP four-disulfide core domain 10A EMBV3_07388 AGGCATTCCCGGTTGGGAGTTCGTGGACTACTGAGAAGGCAACCCTTTATGTCTCACTCA Gene BVV0102_047650 + 0 NULL GK000021.2:21250191-21358093 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21153 GCACGCGACGGCGACGGAGCCGTGGGGACGAATTATTTGTCAGGGAAAATCATGAGTTGC Variant GeneID:407144|TRNT1:NM_001045876:8_cdna 59^232 1 EMBV3_18179 GeneID:407144 22 GENE TRNT1 MGC140399 bMtCCA tRNA nucleotidyl transferase, CCA-adding, 1 EMBV3_11463 CCACCAGTCTCAGGGCTAAAGGGCTGGATTTGTATTGATACTAGGCAAAGTCTGTCCCCA Gene BVT0102_324631 - 1 EMBV3_33383 GK000018.2:35491555-35493611 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082951 TCONS_00082952 TCONS_00082954 TCONS_00082947 TCONS_00082948 TCONS_00082953 TCONS_00082946 TCONS_00082955 TCONS_00082950 1 XLOC_051147 Coding TCONS_00082946 XLOC_051147 Coding Coding NUTF2 18:35476606-35492914 = TSS62460 2458 1 TCONS_00082946_3 127 5 0.849573802661434 0.00131917921521847 0.000320033278698209 0.000625963969888793 0.000196366249710347 0.000135114347074954 8.23173151561379e-05 0.000251053163634405 0.000424276965535148 0.000368028488860355 9.35183806084331e-05 2.82561645110976e-07 6.84635023131472e-11 4.30880410433543e-05 0.000179967019766319 0.000135299670514144 0.000559385384599637 0.000705250864514922 1.47917470691302e-09 0.00026362792661012 0.000986494996251464 0.000247015114174778 0.00113924091614452 0.0011359825346747 0.00170490431205953 0.00044016504098174 0.000119031794032884 0.000120316240337274 0.000196202761067951 0.000147346338355188 1.9713658155245e-10 NM_001037624.1 NUTF2 Bos taurus nuclear transport factor 2 (NUTF2), mRNA. 0.0 1564 99.89 0.354353132628153 XM_005255771.1 NUTF2 PREDICTED: Homo sapiens nuclear transport factor 2 (NUTF2), 0.0 2013 81.38 0.854353132628153 TCONS_00082946_3 sp|Q32KP9|NTF2_BOVIN NTF2_BOVIN Nuclear transport factor 2; 3e-92 267 100.00 0.992125984251969 1 noncoding 0 0 0 0 -0.0224765566175469 0.878529416809332 0.0369121307605294 0.549227632041588 GTTCCAGAGGCTTCCGCTAGACCACAATTCTCAGGGGCTCGCCCCGGCGGCCTCCCTCCCTAACTTAGCCTCACCTCCCGCGCTGCGGGCCGTGTCTGGGCCTCGGCGAATAGGACGTCGGGAATGGTAGTTTTCTCCCAGCGCACCTATACCAGAAAAGAGCACGAGGAGGACTGCGTTTCCCAGAGTGCAGCGGGGTGGCAAGGGAAGGCAGGGGGGAAGGGACAGTCGGTCGCAGACCGCGCTGGGTTGCCGCCGCTGTTGCCGCCATCGTGCCAGCCCCTCGGGTCTCAACGAGGCCGGGTGACGCTCCAGAATGGGAGACAAGCCAATTTGGGAGCAGATTGGATCCAGCTTCATTCAACATTACTACCAGTTATTTGATAATGACAGAACTCAACTAGGCGCAATTTATATTGATGCGTCATGCCTTACGTGGGAAGGACAGCAATTCCAGGGGAAAGCTGCCATTGTGGAGAAATTGTCTAGCCTTCCATTCCAGAAAATCCAGCACAGCATCACGGCGCAGGACCATCAGCCCACACCAGACAGCTGCATCATCAGCATGGTTGTGGGCCAGCTCAAGGCCGATGAAGACCCCATCATGGGGTTCCACCAGATGTTCCTATTAAAGAACATCAATGATGCTTGGGTTTGCACCAATGACATGTTCAGGCTTGCCCTGCACAACTTTGGCTGACCTCCTCCCAGCCAGGCACTCATGCTGTTTCCTCCTCCCTCCTCTTCCCGATACTATTCACACTCCTCCAGATGCTCCAAATATCATTCACAAACGAGCAGGGCCGCGGTGGGCGTGGGCGCAGTGCGCTGCTGCTACCGAGGTGTTGTGCATGATGTTTGGATGCTAGACTAGTTGCATCTGACAGGAGAAGTTTGTGTTGTACCAGCGCATGCCTTGGAAAGACTTAAGTAATGCAAAAGGTTGTCTTTTTTTTTTTTTTTTTTAATCTACTGACAAGTTGCTCTAGTAACCCAAAGAAGTGAAGGAGAAAGCAGCTGCCTCACCGCCCAGATATTGATTTGTTCAGATGTTTCAATGCCTCATGATACAATAAAACCACGAAAATTTTCTTAACAGTTTAAATTGTTTGAATTAGTTGAATAGTGGGCTGGGCATCCATAACTACCCTGCCTCATTGGCTCTCTCATGTCTCACCATCCCACATCTACGCCCACTCAGCAATACCTGTTGCAAGGAGAAAACACCGAAGCAGCACTCTGAGCTCAGGCAGCACTCTGCACTCGCTTCTCTTAGAAGCCCTGTAGGGCATAGTGTTCCCTCCATCTGGCCTTGGAAAAGTGAGCTGCAGACAGGGAGAGCTCAGGTCTGAACGGAAGAGTCCCTTGAAGCCTCGGCAGTCAGTCCTGACATTTCCTGTGACCTCTACACTTGGTAGCGTCAGGGCTCTAATGACAGGTGAGATGATGCAGAATCCCACCGAAGATTGAAAAGCCTTGGCAAAAATGGCCCATTAGGTTCAGGCCCTCTGGACTGAGGGCTCAGCAGGACCAAGTATGAGCAGGCATTTGAGGGCGAAGGCCTTGTTCTAGCCACAGAAAGGTCAGTATCACATCCAGCATGCCCCGTAAATCCCCGGACAAGCAGAGGGCAGCTCTTACCCTGTACCATCTGCTTCGGATGTCACTACCAAAACGGGAGTGCCTCAAACAGCCAGCCTCCAATGCCCAGAGCCAGGCCCAGTTGGGTTGGAGTATAGATTTAAAACTGAAAGCATTCTGAGTTTGAGGGAATTCAGGTTGTAGGATTTCTCATGCCTGAGACCTCTGCAAGGCATCTCTAGGCCTTCTCCTATTCCCTCCCTGACCACAAACACAAACTCACACTACTATCCTCAAATCCCAGGAAATCTCAGCTGTTGGGGCAGTTTCTCCTCCTTAGTTTTGGGGACAGACTTTGCCTAGTATCAATACAAATCCAGCCCTTTAGCCCTGAGACTGGTGGTGTAAAACTGATGGCAAGGTAGCAACCACAGACCAGAACCAAACCCAGGATTTGGTCTGTTTACCTGTTTGGGGTTTTAGGATTGGTGAGGGCACCACAGCTTTGCCTGTTATGCACAGCCCCCTTCCCTCCTGCACTGTGGATGGAAGCCAGGAACTTCATCAGACCCCCACTGGTAGCCTAGCTATGCTGGGCACTGGGCTGGATGGTGTGCTGTTTGAAATAACCGCATACTCAGGAGGTTTCAGTGGGACTAGTTTCTTGGCTGCTCTGTATTTGGGGGATAGAGGTTGGGGAGAGGTAGAAACCTGCTGCCTCTTAAACCACCCTGTATAAAATTTGCAATACAGCTTTTCCATGTACCTGTGCCTGAAATGTCTGCAATAAAGAAGTGTTTGTAAACCATGGTTTCTTTCTTTTTACCTGATGGTGCAAGGTCATGCAGAGGGATGCTGGGAGACATTAGGGAACAAG EMBV3_31010 TGTCCTCACAACAGGAGTCTTAGTGTTGATAACCATGCTCCCAATGATTCCGCAGTCGGG Gene GeneID:533440|TSC1:NM_001075992:154_cdna Constitutive 0 NULL GeneID:533440 11 GENE TSC1 MGC165718 tuberous sclerosis 1 EMBV3_26314 TGCGGGGGTCACAGGTTTGATCCCTGGTCCGAGAAGATCCCATGTGCTGTGGAACAGCTA Gene GeneID:789384|ZNF250:XM_002692539:148_cdna Constitutive 0 NULL GeneID:789384 14 GENE ZNF250 NULL zinc finger protein 250 EMBV3_26839 AGCTCCTTCATCAGGCCAAGGGCCTCGGCAAAGTAGCAGTGCCACCATGGGTTGATAGTA Variant GeneID:509355|SYAP1:NM_001034348:6_cdna 282^467 3 EMBV3_14325 GeneID:509355 X GENE SYAP1 MGC127250 synapse associated protein 1, SAP47 homolog (Drosophila) EMBV3_32579 TCCCCAGGAAAAGAATGGTGGTCACAGGAAAGGAGATGCTGAAGAACTGAGCGAGCCACA Gene GeneID:532923|GOLGB1:XM_002684791:139_cdna UTR3_Alt 3 NULL GeneID:532923 1 GENE GOLGB1 NULL golgin B1, golgi integral membrane protein EMBV3_39057 TGGAAGTGATTGAACAGGGGAACTGCCCGAGAGCCCCCCAGAGTACCCAGATTATGATTT Gene GeneID:785342|LOC785342:XR_084125:151_cdna Constitutive 0 NULL GeneID:785342 X PSEUDO LOC785342 NULL similar to LOC100126053 protein EMBV3_31837 AGCAGCAGCGGCAGCATTTTAGAAGGCTCAGATGGTAAAGCGTCTGCCTACGATGCGGGA Gene GeneID:617275|CCDC72:XM_002697282:60_cdna Constitutive 0 NULL GeneID:617275 23 GENE CCDC72 NULL coiled-coil domain containing 72 EMBV3_01336 AATCCATCAGAGACCACCAAAGTGGCCTTCATTACCCTTCTAGCTCAGCATGACTGGAGG Gene BVT0102_201774 - 1 EMBV3_14222 GK000015.2:47395048-47410764 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07887 CTGGGGAGGTGTGATATGGTCATTACATTCAGGACCCTGACTGGTCTAGCAATAGATTTC Gene GeneID:326577|SLC1A4:NM_001081577:20_cdna Constitutive 2 NULL GeneID:326577 11 GENE SLC1A4 ASCT1 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 EMBV3_19487 CTCTGTGCAGCTGTGGCTTCTCAACGATCATTTGGGGCAGACAGTGTTCATACAGGGCAA Gene BVV0102_164394 + 1 EMBV3_11730 GK000006.2:107221546-107227708 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18570 TCGGCTCTGTGGACTGCTGGTATTGGTGTCCTGGATGGTGAGTGCTATGCATTCCTTGTT Gene GeneID:787882|LOC787882:XM_002688643:5_cdna Constitutive 0 NULL GeneID:787882 7 GENE LOC787882 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_26658 AACCATCTCACTCGCTTCATTGGTGCCTGCATAGACCCTCCCAACATTTGCATTGTCACC Gene GeneID:281357|NPR2:NM_174126:11_cdna Constitutive 0 NULL GeneID:281357 8 GENE NPR2 NULL natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B) EMBV3_39125 GAGGAGCAGCAACGCTTCTCTTACCTACAGCTAAAATACATCACAGAGAAAAATGAAGAC Variant GeneID:613732|APITD1:NM_001038576:94_cdna 95^319 2 EMBV3_09061 GeneID:613732 16 GENE APITD1 MGC134435 apoptosis-inducing, TAF9-like domain 1 EMBV3_11652 TGAAGACCTGAACAGAAGAAAAGATACCAAGGAGATCTATACCCACTTCACCTGTGCCAC Gene GeneID:539521|GNAI3:NM_001034677:164_cdna UTR3_Alt 2 NULL GeneID:539521 3 GENE GNAI3 MGC127972 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 EMBV3_21485 TTGGTCAAGGCTATGATGTTGAACCTAGAGGCCCCCGCTGTCTGCTGGCATTCGGCCTTT Gene GeneID:530174|RNF215:XM_002707703:127_cdna Constitutive 0 NULL GeneID:530174 17 GENE RNF215 NULL ring finger protein 215 EMBV3_22985 CTACATGTTGAGCGTGGCCTACGTGAGAGACAAGACCAAGCAGGGGCCTGAGTGCCAAAT Gene GeneID:613541|NDUFA4L2:NM_001113305:46_cdna Constitutive 0 NULL GeneID:613541 5 GENE NDUFA4L2 MGC128627 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 EMBV3_34514 TGACGTGAGCAAGGCTGGGTTAGGAAGTCATTCAGGAGGCTTGGTAATGTGCCAGTCACT Gene BVT0102_403278 + 0 NULL GK000018.2:65960272-65960798 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085103 TCONS_00085104 TCONS_00085105 1 XLOC_051792 Coding TCONS_00085103 XLOC_051792 Coding Coding TRIM28 18:65953793-65960983 j TSS63639 3429 1 TCONS_00085103_4 469 19 0.525664209208513 0.0016613601701944 0.000838607663622932 0.00213249152996337 0.000701305986482046 4.46048650834768e-09 9.64973181710424e-05 0.00152462843467212 0.0012080047778451 0.000547806202086305 3.49239225026792e-05 3.13133475678671e-05 1.67980734828776e-09 0.000214741287918387 8.6918532405787e-06 0.000523305389622512 6.12933293918057e-08 9.44822204459211e-05 0.000130140410210322 0.000849244249550146 0.0020756107240656 0.00132402820768743 1.5583641790426e-05 0.000851937018234062 0.000239057820074265 0.00106529468071325 0.0021919143000027 0.000477301427276021 1.31754189649367e-09 3.41102752744258e-05 2.76963960378049e-06 NM_001206809.1 TRIM28 Bos taurus tripartite motif containing 28 (TRIM28), mRNA. 0.0 2632 99.93 0.426071741032371 NM_005762.2 TRIM28 Homo sapiens tripartite motif containing 28 (TRIM28), mRNA. 0.0 1869 87.96 0.432487605715952 TCONS_00085103_4 sp|Q13263|TIF1B_HUMAN TIF1B_HUMAN Transcription intermediary factor 1-beta; 0.0 897 96.79 0.991471215351812 1 coding 0 0 0 0 0.806375829382557 0.134563036082866 -0.0257760316066289 0.716067114253132 AACGCGCGTGCGCGACGGCGTCGGCGCCAGTTATTTCTGTCCCGCCCCCCGACAGTGGCTCTTTCTGCGAGCGGGCGCGCGGGCGAGCGGTTGTGCGCGTGCCGTGTGGCGCTGATCTGAGCAGCCGCTGAGGCGGCGGCGCAGGCGGCGGCGGCGGCGGCGGGAGAGCGGGCAGCGGCCGGGTGAGCCTCGGTAGCGCCCCGCGCGCAGCGGGCGGCGCCCCAGGCTTTGCCTGGCGGCGCTAGGCCTCGCGGCTGCAGCGGCCCAGCCGTTGGCTGCGAACGCCTCTGCGCCTGCGTGGCGGGCCTCGCGCCCCTCCTCCCTCCTTGGGCGCCCCCGGCGGCGTGTGAATGGCGGCTTCGGCTGCGGCGGCCGCCTCCTCGGCCGCGGGCTCCGCATCGGGCTCGGCGGCGGCATCCGCCTCGGCGTCGTCACCCGCGGGGGGCGGCGGCTGTTCTTCACAGTGGTGGACTGTCCAGTATGTAAGCAGCAATGTTTCTCCAAAGATATCGTGGAGAATTATTTCATGCGAGACTGTGGCGGTAAGGCCGCCACGGATTCCCAGGATGCTAATCAGTGCTGCACTAGCTGTGAGGATAATGCCCCAGCCACCAGTTATTGTGTGGAGTGCTCTGAGCCGCTCTGTGAGACGTGTGTGGAGGCGCACCAGCGGGTGAAGTACACCAAGGACCACACCGTGCGCTCCACTGGGCCGGCCAAGTCGAGGGACGGTGAGCGCACTGTGTATTGCAATGTGCACAAGCACGAGCCCCTTGTGCTGTTCTGCGAGAGCTGCGACACCCTCACCTGCCGGGATTGCCAGCTCAACGCCCACAAAGACCACCAGTACCAGTTCCTGGAGGATGCAGTGAGAAACCAGCGCAAGCTCCTGGCCTCATTGGTGAAGCGCCTCGGGGACAAGCATGCAACACTGCAGAAGAACACCAAGGAGGTTCGCAGCTCGATCCGCCAGGTGTCCGACGTACAGAAGCGCGTGCAAGTGGATGTTAAGATGGCCATCCTGCAGATAATGAAGGAACTGAACAAGCGGGGCCGTGTGCTGGTCAACGACGCCCAGAAGGTAACAGAGGGGCAGCAGGAGCGCCTGGAACGGCAGCACTGGACCATGACCAAGATCCAGAAGCACCAGGAACACATCTTACGCTTTGCCTCTTGGGCTCTGGAGAGTGATAACAACACGGCTCTGCTGCTCTCCAAGAAGCTGATCTACTTCCAGCTGCACCGGGCCCTTAAGATGATCGTGGACCCCGTGGAGCCCCACGGCGAGATGAAATTTCAGTGGGACCTCAACGCCTGGACCAAGAGTGCAGAGGCCTTTGGCAAGATTGTTGCAGAGCGTCCTGGAACCAACTCCACGGGCCCAGCACCAATGGCCCCTCCTCGGGCTCCGGGGCCTTTGGGCAAGCAGGGCTCTGGCAGCAGCCAGCCTATGGAGGTGCAGGAAGGCTACGGCTTCGGATCAGATGACCCTTACTCGAGTGCTGAGCCCCATGTGTCAGGGGTGAAGCGACCCCGCTCAGGTGACGGCGAGGTGAGTGGCCTCATGCGCAAGGTGCCTCGGGTGAGCCTCGAACGCCTGGACTTGGATCTCACGGCTGACAGCCAGCCACCAGTCTTTAAGGTCTTCCCAGGCAACACCACTGAGGATTACAACCTCATCGTCATCGAGCGAGGTGCTGCCGCCGCTGCTGCTGGCCAGCCTGGGACTGCGCCCTCGGGGGTCCCTGGGGCCCCTCCCCTGCCTGGAATGGCCATTGTCAAGGAGGAAGAAACAGAGGCTGCCATTGGAGCTCCACCAGCTGCCACCGAGGGCCCGGAGACCAAACCTGTGTTGATGGCCCTGGGGGAGGGCCCTGGTGCGGAGGGTCCCCGCCTGGCTTCACCCAGTGGCAGCACCAGCTCAGAAGCCAGGTGACCTCGTCATGTGCAACCAGTGCGAATTCTGCTTCCACCTGGACTGCCACCTGCCTGCCCTGCAGGATGTGCCAGGGGAGGAGTGGAGCTGCTCTCTTTGCCACGTGCTGCCTGACCTGAAGGAGGAGGATGGCAGCCTGAACCTGGATGGGGGGGATAGTACCGGAGTGGTGGCCAAGCTCTCACCAGCCAACCAGCAGAAGTGTGAGCGCGTCCTGCTGGCCCTCTTTTGCCACGAGCCCTGCCGGCCTCTGCACCAGCTGGCTACTGACTCCACCTTCTCCCCAGATCAGCCTGGTGACACCCTGGACTTGACCCTTATCCGAGCCCGCCTCCAGGAGAAGCTGTCACCCCCCTACAGCTCCCCCCAGGAGTTTGCCCAGGATGTGGGCCGCATGTTCAAGCAGTTCAACAAGCTGACGGAGGACAAGGCCGACGTGCAGTCCATCATTGGCCTACAGCGCTTCTTTGAGACCCGCATGAATGAGGCCTTCGGGGACACCAAGTTCTCCGCTGTGCTGGTGGAGCCCCCGCCGCTGAGCCTGCCTGGTGCTGGCCTGAGTGCCCAGGACCTCTCTACTGGCCCTGGTGAGGGCCCCTGAGGCTGGGCAGCCCCTGAGCCAGCCCAGCCTGGCTCTGTTCTATGTCCTGTCACTCCTCCCCTCTCCTTCGTCTTCTCTCCAGTGGCCTGGCTCCCGCTCCTTGGTGGCCCATACCCCAGTCCCTCACGATATGGTTTTTACTTCTGTGGATTTAATAAAAACTTCACCGATTAGTCAGGTCTTGGTTGGTGGGGACAGTGGTCCTGGGCCTGCTGTCTGCCTGCCATCAGTCCCTCACTGAAGCCCTCGTGCCAAACACCTTGGTGGGGGTGGGGCACGTGTCTTTAGCCACCTGGTGTCTGGGGAGGGTTACATGGTGGGCAGGCAGGGGAATCCCCAGGTGCATGCTGCACCCTGGACTGGGGCAGAACATTTCTTATAACCAGATGGGGTATCACAGCGAGCTGGGTGGGCTGAGACTTCCACTGGGCTAATAAAGTTGGGTACTGTATCCCTGGGGTATAGGCAAGAGATCTGGGGGGACCTACCATCTTTGGGAGTGCTAGCCTTGAGGCTGAGGCAGGAGGGGTGCTGGGCCAGTGTTCGCAGCTCACCGTCACCTCCTGAGGACCTGGTAGGCTTGCCCAGGTGAAACCATTCCAGCCCTCTATCCCACACCCTGAGTGACTGGCACATTACCAAGCCTCCTGAATGACTTCCTAACCCAGCCTTGCTCACGTCAGGCCAGTCGCACAGGCCCAGAACTAGTGTCCAACCTCTTTTATTACAGAAGGTACAATGAAAATGCTAGGCCATCCACTGGCTCCCTGGGGCAGCACGGGCAGTCAGTCCCTTCGAAGGTTCTTGAGCCTCTCCTCCAGGTCTGCGTCTGCGTCCACCAGGGCAGAGGCTGTAGCCTCTGCTTTCTTTCCACCGGCAGCCACGCTGAGGG EMBV3_25310 CACCCATGAGACAGTTGATGCTGGAAAGAATGTTGTGGGGAGGACTTAACACCCTACTTG Gene GeneID:783484|CNKSR3:XM_002696963:115_cdna Constitutive 0 NULL GeneID:783484 22 GENE CNKSR3 MAGI1 CNKSR family member 3 EMBV3_34546 ACCAGATGGACATAGCGACGACTCTGCTGGAATATGGTGCTGATGCAAATGCAGTTACCC Gene BVV0101_043390 + 0 NULL GK000028.2:15936519-15995991 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160218 TCONS_00160216 TCONS_00160217 1 XLOC_097609 Coding TCONS_00160217 XLOC_097609 Coding Coding LOC100337251 28:15960996-16346934 j TSS119879 2428 1 TCONS_00160217_6 725 20 0.993760639689898 0.00346525294931556 0.00453853199878489 0.00412984767716267 0.00579390906191892 0.00272021487446255 0.00163821011778365 0.000450219725938446 0.00534320485886024 0.00474514038838067 1.92259458551332e-07 0.000339003357101857 0.000146411492449057 7.48090166219091e-09 0.000253691645259292 0.00200506791270021 1.54532571627866e-08 1.57928870142465e-05 2.85973426818497e-12 0.00682100501773397 0.00729174736649351 0.00295627446904725 0 1.08435169687931e-12 7.17888471210762e-12 0.00385394159130746 0.00306427783250524 0.00244454121389864 6.23738086401341e-09 1.90244776020843e-05 4.1482521349561e-08 XM_002698854.3 LOC100337251 PREDICTED: Bos taurus ankyrin 3, node of Ranvier (ankyrin G)-like (LOC100337251), transcript variant X1, mRNA. 0.0 2489 100.00 0.567957166392092 XM_005269710.1 ANK3 PREDICTED: Homo sapiens ankyrin 3, node of Ranvier (ankyrin G) (ANK3), transcript variant X1, mRNA. 0.0 3168 92.35 0.893739703459638 TCONS_00160217_6 sp|G5E8K5|ANK3_MOUSE ANK3_MOUSE Ankyrin-3; 0.0 1453 98.48 0.997241379310345 5 coding 0 0 0 0 0.0483790244213161 0.653319431374569 0.00666789793641741 0.895836419454346 TCGTGTGGGAGAGCGCAGGTTCGAATGGAGGCCGGAGCAGTGGCAGTATAGCCCTGGTCCTCATCACACCACGTGAAGTTGGGGCTTGCTGTTTTCCCCATTGTGGAAGTTTGCTGATATGTGCCATTTTATTTGAAGATAGAAGTAAGTGAACATGGCATTGGACATTGCTCATTCGTTGTATTTGCTGTCTGGCCTTTACGCATGTTGCCATTTTACGGACTAAAACTCAACAAGGCAGTTAAAAAGAAATATGCAGTCTGATGCCAACGCGAGTTACTTAAGAGCAGCTCGAGCTGGACACTTGGAAAAGGCCCTTGACTACATAAAAAATGGAGTTGACATCAACATTTGCAATCAGAATGGGTTGAACGCTCTCCATCTTGCTTCCAAAGAGGGCCATGTAGAAGTTGTCTCTGAACTGCTACAGAGAGAAGCCAATGTGGATGCGGCTACAAAGAAAGGAAACACAGCGTTGCATATAGCATCTTTGGCAGGGCAAGCAGAGGTGGTAAAAGTCTTGGTTACAAATGGAGCCAATGTCAACGCCCAGTCCCAGAATGGTTTCACACCATTGTATATGGCAGCCCAGGAGAACCACCTGGAAGTTGTCAAGTTTCTCCTCGACAATGGTGCAAGCCAGAGCCTGGCCACAGAGGATGGCTTCACACCATTGGCAGTAGCTTTGCAACAAGGTCACGATCAAGTAGTGTCACTTCTGCTAGAAAATGACACAAAAGGAAAAGTGCGTCTTCCAGCTCTTCACATCGCTGCCCGAAAAGATGACACGAAAGCCGCTGCCCTGCTGCTGCAGAATGACAACAATGCGGATGTGGAGTCAAAGAGTGGCTTCACTCCGCTCCACATAGCTGCTCACTATGGAAACATCAACGTAGCCACATTGCTGTTAAACCGAGCAGCTGCCGTGGACTTCACTGCACGGAATGACATCACTCCTCTACATGTTGCATCAAAAAGAGGAAATGCCAACATGGTAAAACTATTGCTTGATCGAGGAGCTAAAATTGATGCCAAAACAAGGGACGGTCTGACGCCGCTGCACTGCGGAGCGAGAAGTGGCCATGAACAGGTGGTGGAGATGCTGCTCGATCGAGCTGCCCCTATTCTCTCCAAAACCAAGAATGGATTGTCTCCTCTTCACATGGCTACGCAGGGGGATCATTTAAACTGCGTCCAGCTTCTCCTGCAGCATAATGTGCCTGTGGATGACGTCACCAACGACTACCTGACCGCCCTGCACGTGGCTGCCCACTGCGGCCATTACAAAGTCGCCAAGGTTCTCTTGGACAAGAAAGCTAATCCCAACGCCAAAGCCCTGAATGGCTTTACCCCTCTTCACATTGCCTGCAAGAAGAATCGAATTAAAGTGATGGAACTCCTTCTGAAACACGGTGCATCCATCCAAGCTGTAACCGAGTCGGGCCTTACCCCAATCCATGTTGCTGCCTTCATGGGGCATGTAAATATCGTGTCACAATTAATGCATCATGGAGCCTCACCAAACACCACTAACGTGAGAGGAGAGACAGCCCTGCACATGGCAGCTCGGTCCGGTCAGGCTGAAGTCGTGCGGTATCTGGTGCAAGACGGAGCTCAGGTAGAAGCTAAAGCTAAGGATGACCAAACCCCTCTCCACATTTCTGCCCGACTGGGGAAAGCGGATATAGTACAGCAGTTGTTGCAGCAAGGAGCATCTCCAAATGCAGCGACAACTTCGGGGTACACCCCGCTGCACCTTGCAGCGCGAGAGGGACACGAAGACGTCGCAGCTTTCCTTTTGGATCATGGCGCATCTTTAGCTATAACAACAAAGAAAGGATTTACTCCCCTTCATGTGGCAGCAAAATATGGGAAGCTTGAAGTAGCCAATCTCCTGCTGCAGAAAAGTGCATCTCCAGATGCTGCTGGGAAGAGCGGGCTAACGCCACTGCATGTAGCTGCACATTATGATAATCAGAAAGTGGCTCTTCTGCTTCTGGACCAAGGAGCCTCACCCCACGCGGCTGCAAAGAATGGTTATACGCCACTGCACATCGCTGCCAAAAAGAACCAGATGGACATAGCGACGACTCTGCTGGAATATGGTGCTGATGCAAATGCAGTTACCCGGCAAGGAATTGCTTCTGTCCATCTTGCAGCTCAGGAAGGACATGTGGACATGGTGTCACTGCTCCTCAGCAGAAATGCTAATGTGAACTTGAGCAATAAGAGTGGCCTGGCCCCACTCCATTTGGCTGCGCAAGAAGACAGAGTGAATGTGGCCGAAGTCCTTGTAAACCAGGGGGCACATGTGGACGCCCAGACAAAGATGGGATACACACCGCTACATGTAGGCTGCCACTATGGAAACATCAAGATTGTTAACTTCCTGCTCCAGCATTCTGCAAAAGTAAATGCCAAAACAAAG EMBV3_22259 AGCAATCCTCAGACACCTCACTCAGGACAGATGAGGAAACTGAGGCTTGGTGAAGTTACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17097 GCAGGTGTGATTAAGGTTAGGAACCCTGAGATGGGGAGATTATCAGAGATGACTGGGGTC Gene BVT0101_024411 + 1 EMBV3_26830 GK000010.2:104098219-104124759 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015574 1 XLOC_008513 NonCoding TCONS_00015574 XLOC_008513 NonCoding NonCoding B2M 10:104111321-104132845 o TSS10967 3881 2 TCONS_00015574_6 114 0.358412780211286 2 0.819774195047159 0 0 8.25887550367524e-33 4.2793938041519e-06 2.3598687067045e-17 1.13692029859827e-71 0 0 0 4.79162320161437e-05 0.000149206534607933 1.56362656583632e-42 9.11541941851618e-14 9.3774145656669e-05 1.52097921089485e-48 0.000738471126716198 9.0379866124395e-05 0.000334943234058688 0 1.46436716928335e-33 8.53653930796202e-82 7.44705998300865e-05 0.000106133621965993 0.000283520498730929 7.63927956124723e-77 0 0 0.000137056554834948 0.000182102221894545 0.000333958204830093 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 4e-102 378 90.37 0.0657047152795671 0 noncoding 0 0 0 0 -0.0697443627028062 0.670335117483036 0.0533047877543594 0.438643959977479 GCTTTCACACTGAAATTATATTTGTTTTATTTTTCAGACTGCTTGAAAACAAGTTGGAGGAGACTGTTAATGATAGGCACAGTGATAGTTTATTACATTTTTCAGCCTCTTTTTTTTTTCATGTTAAATAGCTTGGAGTTTTAAGTTCAACTTTTCTGCTTACTTTCATATAGATGAATTAACATAAAACTGAATGGCTGACACAACACCAGGACCATTAAATGGCTCATAGACCAGAACTTAACTCTATTAAAAGTTGCTTCTTTGTACAGTTTGATCATGAACTTCAAGTGTTCTAAGTAGAATGTGGATAGGACTACTGCTGCTAAGTCACTTCAGTCGCGACCCCATAGATGGCAGCCCACCAGGCTCCGTCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAACTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGGCTCTTAGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGTGGTGCCATTGCCTTCTCTGGTGGATAGGACTACGTTTGCTTAACCCTGATTTGATGGTGATGATTGTTCCAGGATGTCTTTTGGTTTCATATCCAACTCTTCTGTGCCTAGAATATACCACCTCCTGTCCTCGGTCCACTTCCCCAACACTGGGCTTTCCTGGTAGCTCAGGTGGCAATGAATCCACCTGCAATTCAGGAGACCAGGGTTCAATCCCCATAGTATCCAGGATGAATTCAAATAGTCACCTTTCAGAAATGGTGCTGAATGTATAGTCACCAGCCTCAGTGTCTACACTGTGTACTCCACCTGATTTTCTCTGTTCAAAAACTGAGGTTTTCCTTCCTGGAGAGGCAAGATGAAAGTCAATATCCTTTCCTGCTTTACCTGAAATGTGGTAATTGCTCTCCACTGAGGTCAATGTCTCTCTAAATTAGGGCTGAGGCTGGCTCTTGTCATCCATCCTATTGAGCTGGAAGAGGTGGACTCAACCAATTTGGCTGAGAATCTTCAGATAGTGGTATCAGTCATCCTCAGATCTGGAAGGATGGTCTGAGACAGGTGAGAACCAGGATGGGCTGTGGTCACTTTCTGAACCCTTGTGAGAGTCTGCCTCCTCACATTTCATTTTGAAAATTTTTAATCTTACAAAAAGTAGAAAGAATGATAAATTTAACTTCTGTGTATCCTTCACTTAGTATTTGATAACATTTTGTCTATCAGTATTCTTTAAATAAACTTCTCTGCTGTATCAGGCGGTATCTGTCTCCAGTGATCAGGGACTTCAGCTAAGAGACTATAAACAGAAAATTCGCAGAAGGAAAACAAATAATATGTAAACATGTGAAATACGTTAAACACTTCCTCTTGAGAATATAAATTCTTTGGACCAGCCCAGCACCCAGCACCTAGCAAGGCGACAGTAGAGGCGGGCAGCACCTGACTGACTGCTGTGAACACCGAGGCCTGATGGACAGGCTGGGGCCGGACCAAGAAGAAAGAAGCAAAAGCTTTGGGCACCGTTGTCCTGGGAACTAGAGGGCTCCCGCTCTTACTCTCGTTCCCTGTTCAGCATGGCAACCACTGGTAGAACAGGAATGGTTTGGCCCACTGGGTGCATGGTGGAGGAGTTAAATAGGCCAGAAATTGCAGGGCCCAGACTCCTGACCAAGCCAGGCTACAGCAAAGCTCCTCCACGCTCATCTGTAGAGCTGATGAGAGCTCTCCCTCACACAGGAGAGTATCCTGAGTGTGCTGTGTGGCCAGATTTGGTTAACCAACAGGAAAAGACAACATGGAAAAGGCAAATATTTATACTGACCTGGATATCTGGCAACAAAGGCCCAAAACTGATTCTGGAGCCGTATTTTTTTTTTTTTTTTTTCCCTTGCTGCTGTTATAAAGTACAACAAACCTGATAGCTTAAACCAACACGATCTATCATCCTCCAGTTCTGTAGGTCAGAAGTTCAACACACCTCTCCTGGGCTTAAAATTAAGCAGCGTTGCTTTTCTTGCTGGAGACTCTGGGACATTCCATGAGCTTACCTTTGCCAGCTTCTAGAAGTTGCCTGCATTCTTTGACGCATGGCCTCTTCTTCACCTGCAAAGCCAGCATGCTGCAGCTCTCTGATTACGCTTCTGTAGTCACATCTCCCTCTGACCACAGTCAGGGAAAATTTTCTGCTTTTAATGACCTCTGTGTTTATACTAAAGACAGTGAAAGTAAAAGTGAATTCACTCAGTCGTGTCTGACTCTTTGTGACCGCATGGACTGTAGCCTGCTAGGCTGCTCCGTCCATGGGATTCTCCGGGCAAGAATACTGAAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCGACACAGGGTTTGAACCTGGGTCTCCTGAGCTGCAGGCAGACACTTTACCTTTACACTAGGCTGACCCCAGTCATCTCTGATAATCTCCCCATCTCAGGGTTCCTAACCTTAATCACACCTGCAAAGTCCCTTATGCTATGTAAGGAAACATATTGAGAGGTTCCAGGAATTAGGCTATAAACATCTTTTGGGGGGATGAAGGAGACATTATTCTCCCTACCACAAGGTGTGTTATGGAGAAAAGTCTAGCATTGTTAATGGTAAGTAGGCAGTTCTGTATATAATGACATGGAAAATATCTATGATATATTGTGAACTAGAAATAAACATGTTCAGTAAGTATTTATAGTATGTCCCAATTTTGTAGAATTTCCATTGTTCCCAATAAATGCTGAATGAATTCTCTCTAAGCCACCCCCACTGCCAAAGCCTGGCTTCTGGGGGCAGATGGTGGAGCCTACCTCACCCCTCAGCTCTCAGGGTATTGGGTGGCAGCCGGGGTGGTTTTGCTGTCGTTGGTCATTAGATTTTTGGCTAATTTGACAAATGATTAGTTGTCTTTTAGCAAACCCATTTGTGGCAAATTGACCTAACAATGATAGTAACAATGATGACAATAAATAATGAAATAAAAAATGATCACAGATTCACCAACCGTCTATTTACTGGCTCCCTCCTTTGCACCTAGACTGCTCCTACTCTGTGTTTGATGGCTCTTGTGTTTGATGTGTATACATCCCTCGCATTTTTGTCCTGTTAATTTTGTTTTAAATTTCTGATTCTTCACTGAACAATTCTTTCTTCACAGTCCTGTTTAAGGAGAAGTGTTTAGAAAAGTTCAAGAAACCAGAAAGTAGAGAGGAAAGAATCTGATGCAGGTATAGGAGGGGGTGGCCAGAAAGGGCCACACAGTCTGATTGGTCAGAGGCAGGTGTCAGTCAAGCAAGCTGGAAAGTGGGAAGGTGGGGTTTAGAGGAATTTGCCGAGAGGGAAAAAGGACATTTGCAGGAGATTCTTAATTTTTGAGAGTGCTGCATGGAATCCCAGGCAAGATAGAAAATCCAAGTTGGGATTCTACAGTTTGGGGTAGGTTCTGAGATGCAGACCCAAGGGCCTATGAAGGGAAAACACCCAAGACAGGAGGCTGTGCCAGTAGCTTAGTTACTGGTGCAGTGGTCCCCAGGCATGGTGCCTAAGCCTTGGCTCCTGGGGTTGTCCCGTGCCCCACAGTGACAGGGAGCCTTGGCTTCAGCATTTACCTAACCTCACTCCACATCCAAGCTGAGGACTGAGGCTAACTCGAACTCCATTTATGCTTCTAGTGGACACTGAGTTCTGAACACCTAATAAGAGCAGGCTCTGTAGTTATAACTTAAAAACTCATCACCTCCTAAATTGTATACAATATTTCAATACATCTATGAGGGGATGGGCTTCCTAGCTGGCACTAGTGGTAAAGCACC TCONS_00015578 s 5' 4677 TCONS_00015575 s 5' 13435 EMBV3_17705 TTTCCACATTTCTTCAGCGGGCAGATGATAAGGAACTCGCTGGGCAGAGGATGAGGTTGG Gene GeneID:507472|DRG2:NM_001014865:481_cdna Constitutive 0 NULL GeneID:507472 19 GENE DRG2 NULL developmentally regulated GTP binding protein 2 EMBV3_08292 ACGCAGGTGCGCGTAGAATTCATGGACGACACGAGCCGCTCCATCATCCGAAACGTGAAA Gene GeneID:282877|RPS28:NM_001025316:9_cdna Constitutive 0 NULL GeneID:282877 7 GENE RPS28 NULL ribosomal protein S28 EMBV3_37841 CCAGGAAAGAAGGGCTGTTCGTGATTTTGAAATACCTCTGGGGGCGATGGAGCCCACATT Gene GeneID:616782|LOC616782:XM_002697894:483_cdna Constitutive 0 NULL GeneID:616782 25 GENE LOC616782 NULL similar to conserved hypothetical protein EMBV3_20190 GGGAGATCACAGAAGGGCTTCACGACAGACCCAGAGCAGGCTGTGATCCAAGGTAATAAA Gene GeneID:508104|TSPYL4:NM_001101064:13_cdna Constitutive 1 NULL GeneID:508104 9 GENE TSPYL4 NULL TSPY-like 4 EMBV3_23730 CAGCACGGCGGTTTCATGATCGAGCGTTGGAAGAGTTCGTTATTTTCAACCACCCCTCTG Gene BVT0102_276627 - 0 NULL GK000013.2:66927387-66985877 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046092 1 XLOC_026611 NonCoding TCONS_00046092 XLOC_026611 NonCoding NonCoding LOC100849067 13:66948789-66951760 = TSS33489 1638 6 TCONS_00046092_1 64 0.442612942612943 2 0.449158249158249 9.13690706033924e-05 0.00107355103223636 0.000141239270835807 5.06968476656339e-06 3.01414344420351e-06 2.35178237267961e-06 0 0 5.35214530750287e-07 5.30290360824457e-06 0 4.36592090466621e-06 4.67119291482223e-06 0 8.82591399632719e-06 0.000532101644055826 9.12214310441296e-05 0.00963590814751622 1.25081722487949e-06 0 0 0.000267288401334815 0 0.000143287540498087 1.69193538321464e-05 0.00033979952300965 0 0.000123143836980504 1.48187145574751e-06 7.34096006693358e-07 XR_138847.2 LOC100849067 PREDICTED: Bos taurus uncharacterized LOC100849067 (LOC100849067), 0.0 2401 100.00 0.811965811965812 NM_000554.4 CRX Homo sapiens cone-rod homeobox (CRX), mRNA. 2e-07 62.6 76.83 0.0494505494505494 0 noncoding AGGAGGAAGCGTGCCGGGACGAGTCCCCGCCGGTGACCTGGGAGAGTCCCGCGCGCGGCCTCCCCACGCCCGGGGTCCCGGCGGCCAGGGAATGGAAGGGCGGGGGCACCGGCCACGGAAGCCCCGCCCCCACCCCGCCCTGAGAGTGCTCTCTACCCATGGGGCACCCACCCATCAGCTCTCAAGCCAAAATACCCTCCCCAACTCCTCCCAACCCACCCATCCAATTGACCCCAAATCTACCTCTCATGAAATTATTACTAATCATCAGGAACAGCAGCACTGATGGAGCCCTCATTCCTTGCCAGGTGCCATGCTAAGCTGTTCAGGTCAACTTTAGAATCTCTTCCTACCAACCAAGTGGGCTGGGCAGGCCAATGATCACCCCCATTTTACAGATGAAGAAACTGAGGCACAGAGAAGGGACTCACCTGACAAGAACCAGGTCTTGGACCCTGGCCTTGACCTGAATTTCCCAAACTGGGGACTGAGACGAGAAGGACAGTGTGGAGCAGATCGGGTTCATCTCTTCCCAACTCCACATTCAGTGATATCATGCTGGTAGCTTGACGTCAGCAGAAGTGGAAGTTTTAACACCGCAGAAACCAGCAGACACGACAAATCAAGGCTTTTTTTTTTTTTTAATTCCAGAGAGCTAGTTGTTAAATATTTACCAGCCCATCACTAGATTCATCCCCAGGAGTTCAGTCGAAAGTTCTGGGCTTCTTCTAAAGCTTGGATGACAAGAGCGCTTAAAAGCATAGACTTTGGACCCACAGACCTCGGTTCAAGTCCCGTCTCTGCCACTTCATGGTTACATCTCCTTGAGGGGAGCAGAGTTTCTTTGAGCCTCACTATGCCAACCTGCAAAAGGAGCTAAAGAGAGTGCTCCCCTCAGAAGACTCACGCGAACGTGAAATGAAGCAATGTCCCCTCAGTGTGTCTCAGCCCTTTTCACACCCTACCGCTGTCTTGGAGGAGAGGGGGCAGCTGGGACCCCTCTTGGCTCTCTGAGCGCATATGTGGCCTTCCACCTGGAGCCACCAGTGGCTCGGCTCAGCCGCTGAGGTTCTCAGGAGGTCTTTTGGGAGGATGTGGCCAGCACGGTGGTTTCATGATCGAGCGTTGGAAGAGTTCGTTATTTTCAACCACCCCTCTGGGTCTTCACTCAGGCTGTAACCCCCACCAGGAATGCTCGCCCCACCTCTCTAGCTTCCCGAACGTCCCAGTCCATCATGGTCCTAAGTAAGTGTGGCCTCCTCCAGGATAAGTTTCCTGACAATCTTCTGCTGGAGGCACACCCCGAGCCATTTGGGAGTGTCTGTCCCCACCCAGAGGGCAGGGACTCTGGCCTATTCCCTGGCACAGAGTAGGCACTGCCAAGCGACACTGTCTGGCCAAGACAGCACTGGGATTAGGGATATACATACAAGAGTTCTAACTCTTCCATTCATTGACTATGTGATCCTGCCCTCTCTGAGCCTCAATTTACTCATCAATAAATTGGGAGCAATAACCTTACCAGGATTATGCAGGCGCAAGAGTTGCTTGCTGGTCTAGCCTGGGGAACTGGTGAGTGACTCTTTGTATATTATTTTGCTTAAAAGATTGTTAGTAAAACAGCAGCTCATTGCTTCA EMBV3_40008 CAGAGTCTTCTAGTGAAGAAAGCGATTCTTCATCCACCAGTAGTCAGAGCTCAGCCTCAG Gene GeneID:781016|CWC22:XM_002685271:92_cdna UTR3_Alt 2 NULL GeneID:781016 2 GENE CWC22 NULL CWC22 spliceosome-associated protein homolog (S. cerevisiae) EMBV3_13335 AGCTGGTTTTCTCTCTGCGCCTGATGGAGGACCTCCCCTTACCACACCATCGTGGACTTC Variant GeneID:280964|ZP3:NM_173974:29_cdna 562^704 2 EMBV3_39630 GeneID:280964 25 GENE ZP3 NULL zona pellucida glycoprotein 3 (sperm receptor) EMBV3_10305 TGCATCAATTCCACAGAGCCATTACTACAGCCTTCCTCTGATGCACAGGATAAGCAGTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37167 TTCGGGGTTCTGCCACTCCCTGAGGCCGGGGGCTTTCGTCCCCGCCATGGCTGAGCTAAT Variant GeneID:509914|PFDN6:NM_001075421:101_cdna 71^216 2 EMBV3_00104 GeneID:509914 23 GENE PFDN6 MGC142467 prefoldin subunit 6 EMBV3_41080 GATGCCTGTCTCTTAACTCGGGGTGGATTTTAACCGTGACTCTTGTCCTCTCTGTGATGG Gene GeneID:509775|TMEM59:NM_001035076:37_cdna Constitutive 0 NULL GeneID:509775 3 GENE TMEM59 MGC127622 transmembrane protein 59 EMBV3_38918 ACAGTGAGGAGGACTGGGAAGAAGTGGAAGTGAAAAGATCAAAATGGAGTTTGAGACGTA Variant GeneID:524274|XPC:XM_002697128:57_cdna 404^527 1 EMBV3_41408 GeneID:524274 22 GENE XPC NULL xeroderma pigmentosum, complementation group C EMBV3_12605 CTGCCAGGGAGGAGCACCAGAGACTGGAAGACCCAGCATAAATCTCAATATTCATCACCC Gene GeneID:516239|GPSM3:XM_002697372:381_cdna Constitutive 0 NULL GeneID:516239 23 GENE GPSM3 NULL G-protein signaling modulator 3 (AGS3-like, C. elegans) EMBV3_02715 GGCTTCTTCACGGTGCCTCCAGAGCACAGGATCGGGCCCGGGATACCCACACAGATGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40045 ATACCTGGAATGGAAGAACAGCTGAATAAGATTCTGGTTCTTTAAATTTGCTGCAGCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08825 CATTTATTGTAAGTATATGAAACAACCAGTCAAAGTTTAAACAGACAGCTATCTCCACAC Gene GeneID:540095|LCORL:XM_002688147:12_cdna Constitutive 2 NULL GeneID:540095 6 GENE LCORL NULL ligand dependent nuclear receptor corepressor-like EMBV3_11817 ACGCTCCATCTGCACCTTCTGCCTCAGCAACCAGCGAAAGGGGGGAAGCCGTCGTGACCT Gene GeneID:518491|TCF15:NM_001081721:1120_cdna Constitutive 0 NULL GeneID:518491 13 GENE TCF15 MGC148764 transcription factor 15 (basic helix-loop-helix) EMBV3_01303 TGATCCCTTTTTCCAGGTTCAAGTGATTGTCTCTGCAGGTGACAGGCAACTGGCTGGGAA Gene GeneID:614141|LOC614141:XM_002696192:202_cdna Constitutive 0 NULL GeneID:614141 19 GENE LOC614141 NULL similar to CD300e molecule EMBV3_29084 CGACTACTGGAGAACACTGAACGATCCGAGGAGGCCAGCCGGTCCAAACAGAAAAGTCGA Gene GeneID:532641|ZFAND3:NM_001102145:47_cdna UTR3_Alt 3 NULL GeneID:532641 23 GENE ZFAND3 MGC155251 zinc finger, AN1-type domain 3 EMBV3_24152 ACTGTAGCCCACTGACTCCTCTGTCCATAGGGTTCTCCAGGGAAGATACTGGAGTGAGTT Gene GeneID:511907|LOC511907:XM_002699835:14_cdna Constitutive 0 NULL GeneID:511907 X GENE LOC511907 NULL similar to Chromosome X open reading frame 57 EMBV3_22234 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32354 TCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCC Spike ESK1104 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42885 CCAGTTTCATAGTGGACTAAAGAAATTAGAACCCAAATAAGTGAGTTTGGACTACAGAGG Gene GeneID:541302|CYP2R1:NM_001076267:208_cdna Constitutive 0 NULL GeneID:541302 15 GENE CYP2R1 MGC140495 cytochrome P450, family 2, subfamily R, polypeptide 1 EMBV3_35249 TTTGTGGCCTGTCACTAATGGAGGAAAGCGGCATTTGTAAGGTTCATCCTGCCCTGAACG Gene GeneID:509322|PGGT1B:NM_001015560:227_cdna Constitutive 1 NULL GeneID:509322 10 GENE PGGT1B NULL protein geranylgeranyltransferase type I, beta subunit EMBV3_43039 GTACTGTGCTGAGCTTTTAGCTTTTTAGCTGCACTGAGCCCTGCCAAGTGTTTGTACCCG Gene BVT0102_034208 + 0 NULL GK000015.2:44726440-44880075 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059235 TCONS_00059231 TCONS_00059234 TCONS_00059236 TCONS_00059230 1 XLOC_036287 Coding TCONS_00059231 XLOC_036287 Coding Coding STK33 15:44552513-44742380 j TSS44458 2520 1 TCONS_00059231_3 517 13 0.986795950828479 0.000799444129796265 0.000725491340052897 0.000725653809668615 0.000787701630799011 0.000279630056187038 8.655461168009e-10 0.000704203625531491 0.000786117155647765 0.00109803327914645 1.84184279838914e-08 1.09688480456876e-18 0 7.3715691149122e-13 0.000167894661722351 1.51706173720307e-05 4.1338396210766e-09 0 1.10102991933165e-06 0.000143126685655079 0.00032623294540396 3.79042914727656e-73 1.48848741624041e-10 4.14254732970981e-07 7.6542858361925e-07 1.47891210906777e-07 0.00016360641004951 0.000100288635079444 4.90188847897036e-19 2.79097807503878e-10 0 XM_005215977.1 STK33 PREDICTED: Bos taurus serine/threonine kinase 33 (STK33), 0.0 4201 100.00 0.923809523809524 XM_005253069.1 STK33 PREDICTED: Homo sapiens serine/threonine kinase 33 (STK33), 0.0 2535 83.99 0.923809523809524 TCONS_00059231_3 sp|Q0VD22|STK33_BOVIN STK33_BOVIN Serine/threonine-protein kinase 33; 0.0 928 98.90 0.878143133462282 3 coding CTCCTTGACAGCTCAGCTGCGGGGAGAAGGGCTTCGCGCCGGCCGACGCACTTTGTCCCCAGGCGGCCCCCGTCCACCTCCGTGCGGTTGCCCCGCCGGCCGAAAAGTTTCTCCAGGTGCGGAATTCCGGGCTCGGCGACCACCGGGACGGAGTGTGCGCGCCAGTCGGAAGCCAGCCCTCCCGCGGGCCCGGCTCTCATGTGTGACTGGAAGTCGAGTGCATCATTAACCTAAGGACCTCACCACTTGGAAGTTAGAGTTTTCACCATCAGCCTACCTTTTCCTTTTTGGTCTGGTTCTTTTCCTCAAACAGTGGAAACATCTTTCTTTTAATAAAGTTGCTTTTGTTGCAGAGTTAAGCAAATGGCTGATAGCAGCTGTGGTAAAAAATCCACAAAGTGCCCCCACTGCTCATCTGCTTCTCAGAAAAATGCACTCTGTATATGTTCTTGTAAAACAAAGCTTTCTCCAATGTCAGTGGTGGAAATGTCACAGACATCAAGCACAGGTAGCTCAGAATTTATAGTCTCACCAGAAAAAAGAAAAGAAAAAGGAGCCAGCAAAGATGTTACCTCTGGAAAAGATTCGCCCTCAAAATCTTCAAATATAGAGAGAAAACCATCTCAACAACAGTGGGGTCGGGGCAACTTCACAGAAGGAAAAGTTCCTCACATAAGGATGGACAATGGAGCTGCTCTTCAGGAAATCTATACCTTTGGAAGAATATTGGGACAAGGGAGCTTTGGAATGGTCATTGAAGCCATAGACAAGGAAAGAGAAACTAAGTGGGCAATTAAAAAAGTGAACAAAGAAAAGGCTGGAAGCTCTGCTGTGAAGTTACTTGAACGGGAAGTGGACATCCTAAAAAGTGTGAAACATGAACACATCATACATTTGGAACAAGTGTTTGAGACACCTAAGAAAATGTATCTTGTGATGGAGCTTTGTGAGGATGGAGAACTCAAAGAAATTCTGGAAAGGAAAGGTCATTTCTCAGAGAATGAGACAAGGTGGATCATTCAAAGTCTTGCCTCAGCTATAGCCTATCTTCACAACAAGGATATAGTACATAGAGATCTGAAACTGGAGAACATAATGGTTAAAAGCAGCTTTATTGATGCTAACAATGAAATGAACTTAAACATAAAGGTGACCGATTTTGGCCTAGCAGTGAAGAAGCATGGAAGGAGTGAGGTCATGCTGCAAACCACATGTGGGACACCCATCTATATGGCCCCTGAAGTTATCAATGCCCACGACTATAGCCAGCAGTGTGACATTTGGAGCATAGGTGTCATAATGTACATTTTATTATGTGGAAAAGCACCCTTTATGGCAAGCTCAGAAGAGAAGCTTTTTGAATTGATAAAAAAGGGAGAACTACATTTTAAAAATTCAATCTGGAATTCCATAAGTGATTGTGCTAAAAGTGTTTTGAAACAACTTATGAAAGTAGACCCTGCTCACAGAATCACAGCTAAGGAACTACTAGATAACCAGTGGTTAACAGGCAATACAGTTTCTTCAGCGAGACCAACCAATGTGTTAGAAATGATGAAAGAATGGAAAAATAACCCAGAAAGTGATGAGGAAAGCACAACAGACCAAAGAGACAGCAGGTCTGGACAAGAGGAGTCGAAAGTTTACCAACCCAGCCGAAATGTCCCTGATGTCAGTAACTCTTCAGATGAAGAGGAAGGAAAACAGCCCACTGCTTATGAAAAGACTCCTGTGCCCAGTAAGAAGGAAAATATAGACAACTTTGACACGAGTTTTACAAGTTCTGTAGGTAGCAGACTCCCTCCAGTTGAGCTCAAGGGAGAAGTAGAGAAACCACCTGTGACGTCAAGCCAAGGAACAGCAGCCAAAGGCACTGCTAAATCCATTGCCCTGCCTAGACCCAAAAAGAAGCCCTAACAATGCTGTAGTGCAGAAACAGAGCTGCTCTTTCTAGCACTAAGAATGAAGGGGCAGGAGGGGAAAGGACAGTACTGTGCTGAGCTTTTAGCCTTTTAGCTGCACTGAGCCCTGCCAAGTGTTTGTACCCGTTTAGAATTGAAGCTCCTCAACTCCAAAGCAGCGTGGTATTGAAGGACGGACACCAACAGACTTGATGGCAAGTGTGGCTGAAATCAACTCAAGGTGTTTTCAAGAGTTGTTTAGAGGAGGGGATCCCCTCAAAGCAAAGCTGTGGGCACACTTGCCCAGTTTTACTTAAGATTCGTACGTTTAGGCACAATTATTTTTAGGGGAAACTGAGAGTGAAATATGGTAGTAGAGGCTCCAAATGATTATGTGCACTTTGCACTAGGATATTTGTTAGGAAATTACTAATAAACTTGCCATAGGCAAAACAGCAGAAGTGCTTCAGCCATTCACGTGTGTCCTTGTGATTTTAGATTGCTGTAGATTGTTTAAGACAGCTTATTTTAAATGTAGAAAAATAGATTTTGTAACTATTTGCCATTAACTTGCTGCTAAATTCCCAGTGTATTGATTTAATCAATAAAAAACCAGATG EMBV3_12863 GGCAGCAAAAGAAAATATCGGAAGAGCAGCCTGAAGAGTAGAAAACGCTGTGACGATGCC Gene GeneID:281537|TNP1:NM_174199:17_cdna Constitutive 0 NULL GeneID:281537 2 GENE TNP1 NULL transition protein 1 (during histone to protamine replacement) EMBV3_04452 AGTATTTTATACCACAGAAATTGGTGAATGCTATAGATAAGGGCTTTTTTTCCCTTCCCC Gene GeneID:537349|DZIP3:NM_001076092:101_cdna Constitutive 4 NULL GeneID:537349 1 GENE DZIP3 MGC137859 DAZ interacting protein 3, zinc finger EMBV3_19236 ATGCGATCACATTCACAGACGACTTTTCCTATGGGATGCACAGGGTGGAGACCAGCTGCT Gene GeneID:617849|MSRB3:XM_002687541:531_cdna UTR3_Alt 2 NULL GeneID:617849 5 GENE MSRB3 NULL methionine sulfoxide reductase B3 EMBV3_31347 CCGCGGGTTGAGCGGGAGGCGCGCGGAATTAACTTTGGTCAAGTGGTGGCCGATGTGCTC Variant GeneID:506605|MAD2L2:NM_001045946:37_cdna 51^153 6 EMBV3_06675 GeneID:506605 16 GENE MAD2L2 MGC137331 MAD2 mitotic arrest deficient-like 2 (yeast) EMBV3_42405 TCTGCGTCACCACTTGTGTCACACAAAAACCATCTACAAAGTGAATGGTTTCCTTGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08123 GTCCTACGTAAAAGCGATTGACATCTGGATGGCGGTGTGCCTTCTGTTTGTGTTTGCAGC Gene GeneID:537660|GLRA2:XM_002700397:69_cdna Constitutive 0 NULL GeneID:537660 X GENE GLRA2 NULL glycine receptor, alpha 2 EMBV3_28922 AATCCCAATGCTGAAGATCGTGTTTGCAGGCCACGAGTACCTCTCTTTAATATCAGTCCC Gene BVT0101_053807 - 1 EMBV3_43179 GK000017.2:12064084-12276998 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074855 TCONS_00074856 TCONS_00074842 TCONS_00074852 TCONS_00074857 TCONS_00074854 TCONS_00074847 TCONS_00074853 TCONS_00074843 TCONS_00074840 1 XLOC_046443 Coding TCONS_00074847 XLOC_046443 Coding Coding SLC10A7 17:11923386-12252671 j TSS56602 3517 1 TCONS_00074847_5 257 10 0.989349619173722 0.00039190174957823 0.000574665540683552 0.000545978540611445 0.000285106056367513 0.000173766031713651 0.000144492171474967 0.000239588514271656 0.000360875446686099 0.000808145640086535 6.79789479074257e-06 5.6024117221917e-05 1.82023144329539e-05 7.25603927139165e-05 0.00051379429109729 0.000517432880634791 0.000529431307163692 0 0.00102090600800458 4.90428525140495e-05 0.000374345431478957 2.8791929757575e-16 0.000373715839757274 0.00012579025357949 0.00012036028320018 0.000877061065683714 0.000645188942751549 0.0003923076117834 7.96281711438886e-05 3.24850024744021e-05 4.89203336139967e-05 XR_228259.1 LOC614109 PREDICTED: Bos taurus sodium/bile acid cotransporter 7-like (LOC614109), misc_RNA. 0.0 4798 99.96 0.756895081034973 NM_001029998.3 SLC10A7 Homo sapiens solute carrier family 10, member 7 (SLC10A7), 0.0 2951 80.65 0.901336366221211 TCONS_00074847_5 sp|Q5PT53|NTCP7_MOUSE NTCP7_MOUSE Sodium/bile acid cotransporter 7; 4e-148 422 92.50 0.918287937743191 2 coding 0 0 0 0 -0.105115519242439 0.41159510316352 -0.0238165478676118 0.737477403492916 GGGGCCGTACGGTAGAGATGGCGGCGCTCAGTGAGACTTTCCTGTCACTGGATACTACTACTCCCAGCCCTCCTCCAAGCCGCCGGAGCAACCCCCTGGTCTTTAATTTACAAGTAGCAATTTGACTTGCTCTGCTGCATGTCAGGTGGGAGCTTGGAAAGTGTGGAGAAGCCCCGGGGATTAAGCGACCGTAGCTTAAAAAGAAAAAAAGCCAAGCAAATAAACAAAACCCACCCACCCTAACAAACATGAGGCTGCTGGAGAGAATGAGGAAAGAATGGTTCATGATTGGAATAGTACTGGCGATCGCGGGAGCAAAGCTGGAGCCGTCCATAGGGATGAATGGGGGTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCGGTGATATTAACCAAAGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCATCGTGGTCACACCCCTGCTACTGCTGCTTTTTCTTGGCTCATCGTCTTCTGTGCCTTTTACGTCTATTTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCCCTCGTTATTGGACAGATTGTCCGAAGATACATCAAGGACTGGCTGGAGAGAAAGCAGCCTCCTTTTGGTGCTGTCAGCAGCAGCGTGCTCCTCATGATCATCTACACAACCTTCTGCGACACGTTCTCGAACCCAAGTATCGACCTGGATAAATTCAGTCTCCTCCTCGTACTGTTCATAATATGTTCTATTCAACTGAGCTTTATGCTTTTAACCTTCATCTATTCCACAAGGAATAATTCGGGTTTCACACCAGCAGACACTGTAGCTGTCATGTTCTGTTCTACACACAAATCCCTCACGTTGGGAATCCCAATGCTGAAGATCGTGTTTGCAGGCCACGAGTACCTCTCTTTAATATCCGTCCCCTTGCTCATCTACCACCCGGTGCAAATCCTCCTGGGAAGCGTGCTCGTGCCGACGATAAAGTCCTGGATGGTGTCAAGGCAGAAGGGAGTGAAATTGATGAGGCCAACAGTATAACAGAGGAGGCGGTCGTTCCGCAGCCATGTATATATGTACAGGATTGTACTTAACAGTTCTGAAGACTTGTATTTGTGAACGTTGCTGCGATGCATATTTTATTTTTTTACACACAAAAAATATGATATAACTGTTTAAAGTGCCTTAAAATGTATTTGACGAGAGCATTATTTCCAAAACCTACTTAGTTGGTTACTGCCAGGGGTGGTACAGTATTTTGGAGTTGTTTAATTTCCTTTTTTCCTAACGCAGAAAACGGCCGTTGAAAGGGACAAAAAAACAAACACGTTTTCCTCGTACCATCTTCGTGCACTACAGCTCTCTCCTAGTTACTGTACTGTTTGAAATGAGGTCACATCATCAGGAAAATGCCCTTCCCGTGACAGTGAATATTTCCAAAATCTTATTTGATTTACCACATGATTCTTTCTTTTTCTGCAACTGTGACATGCCTCTTCCTTATCAACTCAGCAGGGGTCATAGATTGAATAGCTGCTGAAAAGCATATAAGTCATCTGCATTTCTTGATATCATTTTTTAAGACATTCCTTCAAATAGTTTCCACACAGAAATTCCTCAGTTCCATTATAAGAGACTGTGGTGTTCTGTGTCTTAAATTTATTATAAGCTGCTTCAAAGAAAGGGCCTGATGTTTGAGTTATGAGTCAAAGTACATGAGGTTTTGAGATTAAACTACAGGATTTGGGTTTCAGGATTTTTTCAAATTATATTTCAAATGTTTTCCCTTTTTCTTCCATCATTTCTTTCTTACCTGTTTTCCAGCACACTTGGCAACTCCCAAAAGCCAAATGTGAGACACCGAAATGTTACAATTAGCTTGACTGGCAAAATTAATGATGGATGATTCCACATTCCATAACTGAGACCAAAATTGTCTTCCTGTTACACTGATGTGCTGAGCACAAATTTCCCCTTTTAGCCAGAAGCAGCCTGTTACATCTTTGAATCAAGTACACTTAAGGCATTTGAAACGTTATTAATGAGAATTTTCCTTGGCAGATTTGACAAATGTTTGCAACATTTTTTAAAAAAATTAAATCACATTGCTGTTATGAATAAATGAAAATATAAAGGTCACAGAGGCAAACAAATGTTACATATACACGTTGTGTCTAGCTATGTGGAAAGAAAAACAGACACAGAAGATGCAAAACCATTCATTAAGCAAAACAGCAAGTACAATTAGTTCCCAAATTGGCATCAGCTTGCCATGGACTAGCCAGTAGTTGCTTCTGCTGTGGCTGGAAGAGCTTTCACGACCCAGTTAGAGAATAAAGTCATTGCTTTGTAGAAATGAGGGAACACTTTTTCTCTGCTTCCTGCACACCATTCTGTCACACCTCTCTACTTTTCATGATTTAACAGATGACACTGGCATCCTGAGTTGCACTGAGGCCACATCATATCTTTAGCAGCTGTTTTGTTGTTATTTTATCAATAACAGAGAGTCATTCCTTAGAAGCTCACCGTGTTTACCAATATCATAAATTTACATTACTGTTACTGCCAGCTCTTATCTTGTGTTACTTCTGAGTCATTTCAATGTCATTGAAACTCATAAATTTCACAAGAGTTAGCCTCAGTGTAAGTTTTAAGGCTAGTGCCAGACCCTGCAAAAATCTATGCTAAACAGGCTATTTGTCAAGAATTCCTATTGTCAAGAAATTCACTTGTGTCTAAAACTACAGCAATTTTGCTTGGTATTTTTGATGCTTACATATGCAGCACAGAAAGGTTTTTATGTTTTTTTCCTACAAACTTCTTTGAATTTCAGAGTAAATGGAATTGTCTGTCTGAGCTATCATAAAAGTCTTCAGCCTAGTATTAGAATTCTGATTTTTTTCCCCTCAACTGATCTACCTCTGTTGTCTTTCACCTATAGTAGGTGTGACTATGGGATAAAATTCGACTAAAAATGCTATAACATTTTATCTTTTGCTTTAAAAAAGTGTCTTCTGTTTTCAAATAATCTTTACATAGTGAGTTTTGGTGGCTTTATTGATATGTTTATGCCTATTTCTTTTTTTACACAAATGCTGTGCATATTTTTCCATAAAGGACAAAAAAATAAAATCAGATTTTATTTTTAATTCCTGCTTACTGGGATTTAATTATTCATATCTTGAAATATGTCCACGCACTGGTTTACACATTTGTTTTGTCTAAGTGTATTTATGAAAGAACTACATTATATTTATGTTTGCTCATTTTTCCACCTGGATTTTTTTAATGGCTCTTATGAAATTCTATTTTTTAAATGGGTGAGAATATTCATCTTTTCCTGTGCTCTTTTCTAAGTTTTCAAATTTTGTGGGTTCTTTTTATTCTTCCCTCTTCTGGTTAAAACTAACACACCTCTGGCTAATGTTCAGTGTTTATGCTAAATACCAAATTTTTTTAAAAGGATTGGTGAAGTAATGAAGTGGATTATTTATGATGAATGGA EMBV3_31114 CTCCTGGACAGCCGGTCCTACGAAACACTCGTGGATTTTGATAACCACCTGGATGACATT Gene GeneID:510727|COX4NB:NM_001038074:189_cdna Constitutive 0 NULL GeneID:510727 18 GENE COX4NB MGC134258 COX4 neighbor EMBV3_04874 CCTGCTGGCGGGCGCGATTTCACAAGTGAATAATCCAATTCGCGCGGGCGCCAAGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_17540 AGAAACGGGTGGAGCGACAGTTAAAACGGTTGTCATTTCAAAATCCCGGGCCTCAGGTAG Gene GeneID:786338|LOC786338:XM_002707880:59_cdna Constitutive 0 NULL GeneID:786338 X GENE LOC786338 NULL hypothetical LOC786338 EMBV3_01604 CAGCTAAAACTGAGTGCTTACTACAAATAAGGCATCCCGCCAAGTATGCCACAGGGAGGC Gene BVV0102_098488 + 0 NULL GK000013.2:22899993-22967370 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042252 1 XLOC_025627 NonCoding TCONS_00042252 XLOC_025627 NonCoding NonCoding - 13:22924189-22930838 - TSS31500 2604 1 TCONS_00042252_5 72 0.199692780337942 3 0.608754512635379 0.000526556152212339 0.00047886576021849 0.000398705368954528 0.000417693885563151 0.000358028624143646 0.000291593682389664 0.000218077569400126 0.000174656767860106 0.000486500491430624 3.16013509286819e-05 8.79101879994302e-07 0.000205972734095235 0.00013000091279437 7.5866798881765e-05 1.31886841464867e-05 0 0 0 0.000552139760830804 0.000347795983171984 0.000243985274589046 0 4.45294830027501e-05 0 0.000411502854886838 0.000711407318290155 0.00034191406345365 0 0 0 XR_229904.1 LOC101904089 PREDICTED: Bos taurus uncharacterized LOC101904089 (LOC101904089), 1e-11 77.0 71.74 0.0683563748079877 0 noncoding 0 0 0 0 -0.132599242293121 0.24572298103672 0.000120489980455066 0.998210334370821 CCCTAGGAATGAACACTGCGTCACTTCCTGCCTGCTGTCCTCCACAAGCAGTGGCGTGTCCTTCCAGGATCTTGCTTCAGCCGCGTAAGCTCCCACATCCATTAAACCATCAGTGTCTCTGATTGCTGACTCCCAGCTCTTTCACAGGCCTCATAGTTCTGAGGGGTGCAGCCCCACCACTGGCTGAGCAGCCAAGAGACTGAATAAACTCCTGAGAGAGCCAGGGAATGGAAAGTTGCAGGGGCTGTCCACTAACAGGCAAATATAAAGGAGAACTAGTACCAAGGGACATGCTCTGAACCTGGGGTGGGAGCCAGCACGCCAACATCAAGGAGGATTCTTTACCACTGAGCCACCAAGGAAACCCCATGGTTACGGATGCACGAACGAAATTTGATGACTCCAAAGGAGGACCAAGTATGCTCCTCAGACACTAGCAAAACAGTAGCACTAGAGAGGAGAGAGAACCTGAAAATTGGGGCTTCATTGTGAGAATTAAATTATTCTTATTTTATTGTTTTCATGTATGTGTGATGTCATCATCTCTGCCGAGTCAAGACCTCTTCAGGTCTCAATCCACTCTACAACTACACACACTTGCCGAAACAATGTTTGCACCTCTGAGAATCTGAATGAAGAACATGCTGAAGAATGAGTGAGATGTCACTTTAAGGTAAAGGAACAGACCTGTTGTGAGCAACTTTGAAAACTGCCTCATTATTTCCAGCAGCGCTTTGTATATTTGCGAGCACACGTGTGATCAAAGATAGGAGCTGAGTCCTTGTGTGATGAGCTCTGTGTGACTGTGTGTTCATGTAAATGTCTGTGGAGGCATTTGTCCACAAGACGTGGGTAAGTAAAAGATCTCAAATGGTATTCTAATCTCAGAAATGTTGGCTCAGAAGTGAGACAGATTGAAACAATCTTTAAAGAGAATAAGAAACAGAAACAAAGTTGAGTCAAAAAGAGGAAAAAGGCCAATGTGTTATTGAAGAGGCACAAATGCCATAAATTGAAAATAGATGTTTAGCACTGGTTATAACTTATGCTGCTGTGATGTTTAAAAATTACCAATTCTGTAATATGGTTTAAAGCAGTACTTACCAACCTTCAACAAGTTTAGATATTCATCATACACATGTGAAAGAAGTTTGGTCAAGCATAAGCAAAAAAGTAAGACTAAAGAACACACAGAGTTTCTAGTTTGCAGATGTAATTTGTGAAAATTTCACTAAGCTATTATAAAATAGCTCCATTACATTACAGAAAGAAGGAAAAGTTCAGAGAAATGATTACCAGTTAATAGGAAAATTTCAGAGAAATGATTTCTGGTTAATAGGAAGAATTCCACGTTCTAAAGAAAAGTACAGAAAACCTTCCATTTTGATAGACTTGTCCAATGTAAAAAAAAAGAAATAGAACGTGATGTTTTAAGTCCATAGATAGGTTGGTTTAGTGTAAACTGTTACAAAGTGGAAGAAGTATGGAGATCTTAGCTGATTTCCCCCTGGAACCTGTTTTCTTGAAGGTTAGGTATTTCACAAATCTCCTGCATTTGTGTAATGGTTTACCCTTTTTCAAAGGGCTTTTGCATTTCTGATCCTTGTTGATCCCCATAACAACTTTGCACGGTGTTCTGAGTATTAAATGTGAGCTACAGAGAGGTTGTGTGGTTTATTTGAGGTGTCACTGTCTGTGACAGCCCCACTACAAGTAATTCCTATTCTACAGTCATTAATGCCTCCCTAAAATAATACAAAGGGCAGCCATACATCCATTCTAAGAACTGTAGAGCCAACCATTGTCCTGTGTATTTCCTGCCAGGCAGGGAACACAAAGGCTGCCATCTTGGTAGTATAGGTTCATTCTGACCAGTTAGTGCCCAGGTCATGATAAAAATTTTAATATCATCTGTGATTACATGTGTAAAGGAAAAGACCCTGGAAGGGGAGGTCAAGAAAGCTGGGGTCTAGTCCTGGTTTTTATTATTGAGAATGCTGCAGCCGTCACAGCTAAAACTGAGTGCTTACTACAAATAAGGCATCCCGCCAAGTATGCCACAGGGAGGCTCTCTCAGTTCTCACAGTCGCTCTCTGCAGTACATAAACTTAGCTTCTACTTTACTGATAAGAAAACCTAGACTCAAAGAAGTGAAATCAGTTGCCCAAGAATATGTAGCTTAAAAGGGTCAGAAGCCAGGACTTGAACTTGGCAGTCAAATGCCTTAACTTGTGTTTCTGACTATGATGAGAACCAGCCATTCATTGGCTGACTTAGGCAATCTCTTAATTTCTCTGAGTTCAGTTTCCTTGATTAATAGTAAAAAAGGTTTAACTCAGTCCCTTTCAATTCCATATACACTATGGAAATGAGAGAAGAAATATAGCTGAAGTATAATTTCTCCTTTGCTAATCAGTGTGTAAAAGGTGCTCTGAACCCAGCAGATAAAGCTGAGGGCCTTCACCTTCCACCTGTTTCCTCCATTGTAAACTTAGTGTATTGTGTTTATTTATTTTCCACTTTAAATATGTTCCCAGTATGTTACAGACAAAATTTTTAAATCAAAATGGTACATTTACTGAACAATAAATTAAAAAAAAACTC TCONS_00044785 r 5' 24198 TCONS_00044785 r 5' 24198 EMBV3_24397 TCTGAAATCCCCTCACAGCCATCACGTCTAATATGTGGGCCGCTGTCCCATGTGCTCAGG Gene BVT0102_432509 - 1 EMBV3_24726 GK000029.2:45018615-45029459 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165478 1 XLOC_100536 Coding TCONS_00165478 XLOC_100536 Coding Coding RIN1 29:45028266-45034780 = TSS123600 4206 1 TCONS_00165478_1 790 0.0684736091298146 10 0.355750038384769 0 1.74267888040284e-10 1.75968944228031e-10 0 0 0 0 0 1.27363342230651e-10 3.15483807922288e-05 1.88813528047078e-06 0 0 0 6.68777536310471e-11 5.65155219670141e-05 0.000390779932814619 0 0 0 4.86469568985575e-11 0.000199366530969847 0 7.17455495675576e-05 0 0 0 6.28013308947234e-05 2.30842057085588e-05 5.60342882759296e-05 NM_001192217.1 RIN1 Bos taurus Ras and Rab interactor 1 (RIN1), mRNA. 0.0 5434 100.00 0.716119828815977 NM_004292.2 RIN1 Homo sapiens Ras and Rab interactor 1 (RIN1), mRNA. 0.0 2729 84.96 0.576557299096529 TCONS_00165478_1 sp|Q13671|RIN1_HUMAN RIN1_HUMAN Ras and Rab interactor 1; 0.0 1149 83.42 0.99873417721519 2 coding 0 0 0 0 0.00541924241529845 0.967416120333071 -0.00882404702458944 0.882632252988594 ATGGATACCCCCCGGGAGCCAGGAACAGGCCCCCTCGGAACCCCCTACCCAGCCAGCTTCGCTTCTGGGCACCTGGAGAGAGAAAAGCCAGCCCAGGACCCACGGTACGATGTGCCTGGTGCCGGTGGGGTGCAGGCAGGTGGATCGCAGCGGCCAGGGCGCACCGTGAGCCTGCGGGAGCGCCTGCTGCTCACCCGGCCCGTGTGGCTGCAGCTGCGGGCCAACGAGGCTGCCGCGCTGCACGTGCTGAGGACCGAGCCCCCCGGGACATTCCTGGTACGGAAGTCTAACAGTCGCCAGTGCCAAGCCCTGTGCGTGCGGCTGCCCGAGGCCAGTGGCCCCTCCTTCGTCTCTAGCCACTGTATCCAGGAGACTGCTGAGGGCGTCTCCCTGGAGGGCTCAGAGCTCGTGTTCCTAGACCTGGTCCAGCTGATCTGTGCCTACTGCCACACCCGGGACATTCTTCTCCTCCCGCTTCAGCTCCCCAGAGCCATCCGCCAGGCAGCTACCCACAAGGAGCTGGAAGCCATCTCCCATCTGGGCATGGAGTTCTGGAGCTCCTCTCTCAACACCAAGGCTCAGCCAGGCCCATCGGAAGGCCCCCCGCTGCCCCGGCTGAAGCCCCGGCCCCCACAAGAGCTGGACCAGGGCACTGGAGCTGCCCTGTGTTTCTTCAACCCCCTGTTCCCAGGGGATCTGGGCCACACCAAGCGGGAGAAATTCAAGAGGAGCTTCAAAGTGCGTGTGTCCACGGAGACCTCCAGCCCCCTGTCTCCCCCAGCTGTGCCACCTCCCCCAGTCCCGGTGTTGCCAGGGACAGTCCCCAACCAGACAGAAAGGTTGCCCCCTCGCCAGCTGCTACGGAGGGAGAGCTCGGTGGGGTACCGTGTGCCAGGGGGCGCCGGCCCCAGCCTCCCGCCGCTGCCCTCCCTCCAGGAGGTGGACTGCGCCTCCCCCAGCAGCTCAGAGGAGGAGGGGGGGGTGCCGGGGTCCCAGGGGAGCCCAGCGACCTCACCCCACCTGGGCTACCGGCGGCGGCGGCGGCCCCTGCTTCGGTCCATGAGCGCTGCCTTCTGCTCCCTGCTAGCGCCTGAGCGGCAGGTGGGCCGGGCAGCTGCGGCGCTGACGCAGGACAGACACACGGCCGTGGGACAGCTGGTACAGGACCTGCTGACCCAGGTGCGTGCCAGCCCCGAACCCCGGGAGCTGCAGGCCGTCCGCGAGGCCCTGAGCCGGGCCCGAGCCATGCTGAGCGCGGAGCTGAGCCCGGAGAAGCTGCTGTCACCAGACAGGCTGGAACAAGTCCTGGAGAAGTCGCTGCACCGCTCAGTGCTCAAGCCGCTGCGGCCCATCCTGGTGGCCCGCCTGCGGCACCGGCTTTCAGCCAACAGCTCCCTGGGCCGCCTGGCTGAAGGCCTCCGCCTGGCCCGGGCCCGGGGCGCCAGCGCCTTCGGGTCCCACTTAAGCCTGCCCTCCCCGGTAGAGATGGAGCAGGTGCGTCAGAAGCTGTTACAGCTGCTTCGCGCCTACTCACCCAGCGCCCAGGTCAAGCGGCTCCTGCAGGCCTGCAAGCTTCTCTACACGGCCCTGAGGACCCAGGCGGGGGAGGGCGCGGGGGCCGACGAGTTCCTGCCATTGCTGAGCCTCGTGCTGGCCCACTGTGACCTTCCTGAGCTGCTGCTGGAGGCCGAGTACATGTCAGAGCTCCTGGAGCCTGCCCTGCTCACCGGAGAGGGAGGCTACTACCTGACCAGCCTCTCGGCCAGCCTGGCCCTGCTGAGTGGCCTGACAGAGGCCCACACCCTGCCCCTGAGCCCCTCGCAGGAGCTGCAGCGCTCGCTCAGCCTCTGGGAGCAGCGCCGCCTGCCCGCCACCCACTGCTTCCAGCACCTCCTCCGCGTAGCCTATCAGGACCCCAGCAGTGGCTGCACCTCCAAGACGCTGGCCGTGCCCCCAGAAGCCTCAATTGCCACGCTGAACAAGCTCTGTGCCACCAAGTTCCGGGTGACCCACCCTGATACTTTTGGCCTCTTCCTGTACAAGGGACAGGACTACCAGCGCCTCCCCCCCGGAGCCCTGGCTCACAGGCTCCCCACTGCTGGCTACCTCGTCTACCGCCGGGCAGAGCAGCCCGAGACCCCGGGGGCCTCACCTGGGGCTGCCACAGGGGAGGGCAGTGGGGGGCCAGAGGCAGGGGACAGGGAAGAGGACAAAGAGGGCCGGGGGACTGGGGAAACCAAGGCCAAAACCAGCCCCAGGGATGGCAGGGGAGAATCTGAGACAGTGGCCGAGGGGGCCGAGGACCAGGCCAGGGGAGACCCCACTCAGCCAAGAGGGCCAGAGACTGAGGAGAGCCAGGCCGCAGAGGAGTAGCTGGGAATGGACAGAAGGGCTGCGTGGGGCAGGAAGCTCGGAGCCTGCTGGGACGGCCTTGCAAAGTGTCAGCCTCGCCGGCCCAGGCCACAGCCCCCAGAGCCTCCCAACTCTGCTCCTGGTCTGCCACCACCTCTGACCCTCCAGCACACCAATCACACCTGCTAGACACATCCAGGGCACTTGGGTGAAGCCCAAGGGATCTGGGGGGCCCAGATGAAGGCCCTTGGCCTCTCCTCCTGCTCCCCCAGCTGGAAGCCAGGCAGCCCACAGTGAGGAGTGTGTCCAGCAGGGGAGAAATCCATCAGGGGCCCCACCTCTGGCGGCAGTGGGGAGGGGTGGGTGGTTCAAGGCCCAGAAAGGCCCCACCAATTTCCAGGTGTCAGGAGGACTCAGAGAAGCAGCAAGGCCTCAGGGCTCAGTCCTGCCCACACCACCTGCAGAACAAGCACCTCCGAACCTCAGTGTCCTCGCCTATAAAGTGGGGGTGCTACCGCTGCCCTGCCATCTCCCAGAAGCCTTCCATGGCTCAGAATAGATGGTTTTGTTGCAGAGCAGAGCACAGCTAGGGAAAGGGGAGAGAAAGAGGTTGAATATTAGCAAAACCCCCAGCTTGCGTATACACACGCCTCTCTGAAGGTCCATTCTCCACCCTCACCTAAGGGAGAGGTTCTCCAAGCGGCCCTGGGGGACATCCAGGGGGCCAGGCTCAGCCAAGGGAGCACCCCTGTTCCAGTCTTTCCCCAAGAGAAGAAGTCCTCCCAGGCACGCTGCTGTCCCAGGGGAAGTGGACAGGTGAGACAGCCTTCTGAAATGGAATGAGGACTCGGAAACTGTCTCTTCTGCACTGAAGTCTCTTGGACCTCACAAGAGGTTTTTCAGGAGTCAGGGTCTGATTTATTACCCACCGAGGCTGGGAAAGTGACTCCTAAGACGCCACACAGCGGACCATTAGACCAAACCAGGAGTCAGGTTCCAACTATGCCTCGTGTTCTAAGCCACCAATACATTAATCCTCAAGGTTTAGGGCTTCTCCGATGGCTCAATGATAAAGAATCTGCCTGCAGTGCAGGAGATGTAGGAGATGGGGGTTTGATCCCTGGATCCGGAAGATCCCCTGGAGGAGGAAATGGCAGGCAACCCACTCCAATATTTTTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTAGGCTACAGTCCATGGGGTCGCAGAGAGTCAGACCTGAGCGACTGAGCGGGAGGTTCAAGCAGACAGCAAATGAGCAAAGAAAATACCAGAGACCACCACAAGAGGGCACACGTGGCCCAGGAAGTGGCTGAGAGGGCGCCCTGATAGACTTCGGCTCCGGGGCTGCAGCGGTGCAGGTGGTCCTGGGGTTTGCAGTCTGGCAACCGCCAAGCAAGTAGGGGGCAGTGCAAGAGCCAAGACTTCTGGCCCTCAGCTCTCTTGGGAGTCTGAGGTCTGGATGAAGCTGGCCTCCGGGGACCACTCCCTGGGAAGGAACTAGGCCCCAGTGGAAGGAGGACCCTAGCCAGTCTCCGAGGGGCTCGCTCAGGCCCTGAGCACATGGGACAGCGGCCCACATATTAGACGTGATGGCTGTGAGGGGATTTCAGACCCTCCAGGTACAGCCCGGGTGCAGGACTCCCAAGTTTCTCACTAGGCCATCGGCAGCTCTCTGCCACCTTCCACCCCATCCCACGCACACACAGGCTGCTCCCTGGCGAGGGGTCCCCCTTTACTCTTTTGTATGTTCTCCCCACCCGCACCCACCCAGTGCCTTGTACAGTGCTGGGCGCTCCACTGGCGCTCAATAAATGTTGTCCACTG EMBV3_19635 TATTGGTGCCTAAACGTCTCCGCCACCCGGAAGAGTGGATGTGGGGTATGGAAGGAAAAG Gene BVT0102_121121 - 0 NULL GK000029.2:46364997-46407485 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39410 AGGGAGGAATTTAGGAGTCTTGTATCTGCATCACGGTCTCTCCAGCTGCCCCTCATCACT Gene GeneID:616841|TCF23:NM_001038216:231_cdna Constitutive 0 NULL GeneID:616841 11 GENE TCF23 MGC134543 transcription factor 23 EMBV3_00144 CTCGACGGTGAGGCAGAGATGGTTTTCCTTTATGGGGGTCTCCGTACTGTCATTGTAGCT Gene GeneID:100335358|LOC100335358:XM_002693080:418_cdna Constitutive 0 NULL GeneID:100335358 15 GENE LOC100335358 NULL hypothetical protein LOC100335358 EMBV3_05549 CCTTAGTTTATTTAGTTGATCACTCTTCTCAGTTCATAAGAGTCTCAAACACTTGTTGCC Gene GeneID:100138100|SETDB1:XM_002686045:251_cdna Constitutive 0 NULL GeneID:100138100 3 GENE SETDB1 NULL SET domain, bifurcated 1 EMBV3_13230 CAACAACCCCAAGTACGTGCTGAGGAACTACATTGCACAGGGCGCCATTGAAGCTGCTGA Gene GeneID:790464|SELO:XM_002688000:135_cdna Constitutive 0 NULL GeneID:790464 5 GENE SELO NULL selenoprotein O EMBV3_12112 GTAGTGTCAATTAGATGTACATTCCTGAGGTCTTTTATCTGTTGTAGCTTTGTCTTTTTC Gene GeneID:782669|HNRNPA3:XM_002685299:114_cdna Constitutive 0 NULL GeneID:782669 2 GENE HNRNPA3 HNRPA3 heterogeneous nuclear ribonucleoprotein A3 EMBV3_13421 CGCATTTCTCTGCATATGGGAAGTTTCATGTCTCTCTTGAGATGGGGGACCGAGCAGAAC Gene GeneID:784587|KCTD1:NM_001080360:16_cdna UTR3_Alt 2 NULL GeneID:784587 24 GENE KCTD1 MGC137856 potassium channel tetramerisation domain containing 1 EMBV3_18893 GATGAGACCAAACTCTCTGGGGCAAGCAGCTGGCACTCCTGGAAAGACTCAAGCAATAAT Gene GeneID:520403|CA7:XM_002694805:651_cdna Constitutive 0 NULL GeneID:520403 18 GENE CA7 NULL carbonic anhydrase VII EMBV3_17911 GTGTGACTATGAAAGATGTAGTTGAGTGAGGAGTTGAGGAATTGGGAGGATAGTGAGCTC Gene GeneID:532556|MGA:XM_002690801:12_cdna UTR3_Alt 2 NULL GeneID:532556 10 GENE MGA NULL MAX gene associated EMBV3_38835 ACAGTGCCTCTGCAAACTAAGGCGAGATTAGGTAGGTTGGGGACCCCCTCAGGATTATTT Gene GeneID:282434|HSD11B2:NM_174642:63_cdna Constitutive 0 NULL GeneID:282434 18 GENE HSD11B2 MGC127544 hydroxysteroid (11-beta) dehydrogenase 2 EMBV3_12537 ATTTGCACCACTAGGGACTTGGAGACCAAATGGAGACTGTACTACTGGCCTCAGCTGTGA Gene GeneID:539500|ZNF710:XM_002696565:165_cdna Constitutive 0 NULL GeneID:539500 21 GENE ZNF710 NULL zinc finger protein 710 EMBV3_28288 TAAAGTATAAATCTCCTTTGACTAGATTTTAATCTTATTTAGAAAGGAAAAAGTATTAAA Gene GeneID:513242|TMBIM4:NM_001014914:1007_cdna Constitutive 2 NULL GeneID:513242 5 GENE TMBIM4 CGI-119 MGC129065 transmembrane BAX inhibitor motif containing 4 EMBV3_27386 CCCAGCACACTCAGAGACAGACCTCAGGATATCATTGTGTTTATCATTGGAGGAGCCACC Gene GeneID:541230|VPS45:NM_001083501:148_cdna UTR3_Alt 2 NULL GeneID:541230 3 GENE VPS45 MGC139503 vacuolar protein sorting 45 homolog (S. cerevisiae) EMBV3_22316 ATTGTGAATGGGGAACGGGTGACGTCAGCGCCGAATGTCAACAATGTAGCGATTGAGAGT Gene GeneID:100296943|LOC100296943:XM_002690187:15_cdna Constitutive 0 NULL GeneID:100296943 9 GENE LOC100296943 NULL hypothetical protein LOC100296943 EMBV3_35520 AACGCAGCCGTGGAGAGAGAAGAACAAAAGGAACCTTGGATAAGCATAAAGAGCTGGAGG Variant GeneID:100336940|LOC100336940:XM_002692040:50_cdna 295^598 1 EMBV3_01059 GeneID:100336940 13 GENE LOC100336940 NULL serine palmitoyltransferase, long chain base subunit 2-like EMBV3_15599 CTGTCAGCCCCGCTGTCTCGGGCACACCACTTATTCTGTTGGTGAAATAGCTAATATGGG Gene BVV0102_126191 + 0 NULL GK000022.2:31621323-31735989 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130779 1 XLOC_079485 NonCoding TCONS_00130779 XLOC_079485 NonCoding NonCoding - 22:31652260-31652649 - TSS97646 389 1 0 0.000209856538145365 0 0 0 0 0 0 0 8.11324339103051e-05 0 0 0 0 0 0 0 0 0 0 0.000203356738639445 0 0 0 0 0 1.81117443325661e-05 0 0 0 0 0 noncoding CTTAACTGGGCGCATGAATATAAATCACAGGGATCCCTGGATATTGGAATAGTGCTCAATTCTGAGCTATAGATACCTTTTTATGGGCTTTTTCCCCCAGCACAGGAGGAAAAACAAGTTTTGGGGAACAGTTCCCATATTAGCTATTTCACCAACAGAATAAGTGATGTGCCCGAGACAGCGGGGCTGACAGCAGCAGCAGCAGAGAAGGTCAGGTCTCAGGTGCACCTGGTGGATGCTCTTTTATGCCACCCGACCTCAAGGAATACTATCCCACGTTTCCACCCGCATGAAAATTCTTTGCAGGTGATCCTATACCCCTCTTAAGCTCTTCTTTTTCCAGGACAAGCATAACTATAAAAAGCATCTCATCTTATCTCAAACAGAAT TCONS_00128460 TCONS_00128461 TCONS_00128462 TCONS_00128463 TCONS_00128464 TCONS_00128465 TCONS_00128466 TCONS_00128467 TCONS_00128468 . 3' 80275 TCONS_00128460 TCONS_00128461 TCONS_00128462 TCONS_00128463 TCONS_00128464 TCONS_00128465 TCONS_00128466 TCONS_00128467 TCONS_00128468 . 3' 80663 EMBV3_04842 TGGACAGAGCATCTGAATAGCCATTTGTCTAAAGAAGATGTATAGATGGCCAACAGGTAC Gene BVV0102_203719 + 0 NULL GK000008.2:82491695-82658982 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37471 CTGACGTGCTGTGGCAGATGGGCTACACAGGGTTGGGCCATGGCACGTTCGTGGCAGGTG Variant GeneID:511682|MBTPS1:NM_001025330:26_cdna 748^858 1 EMBV3_09886 GeneID:511682 18 GENE MBTPS1 MGC139300 membrane-bound transcription factor peptidase, site 1 EMBV3_33254 ATGCTTGGTGGGTCACTGAACACTGCGATGAAGCACCTCTGCGAGATCCTGACCACGGAT Gene GeneID:515565|ROPN1L:NM_001075717:23_cdna Constitutive 0 NULL GeneID:515565 20 GENE ROPN1L MGC128006 ropporin 1-like EMBV3_01737 CCCTCAGCCCCGGTGGAGCAAGGATATTCACACTGTATTGTCACAGTGGTTTTGCACTTT Gene BVV0102_139881 + 0 NULL GK000028.2:13680715-13689050 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25210 CACTTCAACTCCAAAGAGGAGCTTATCCAGCGCTACGTGGACGGTGGCATCTCAGACAAC Variant GeneID:508493|PNPLA2:NM_001046005:248_cdna 558^623 1 EMBV3_00574 GeneID:508493 29 GENE PNPLA2 ATGL MGC137478 patatin-like phospholipase domain containing 2 EMBV3_18045 GCTGATCTGGCTGGGACTGATGAACCAGAAGAAGGGCTGGAGGATGATATTATGTTTGGG Gene GeneID:522338|MRFAP1:NM_001035344:41_cdna Constitutive 0 NULL GeneID:522338 6 GENE MRFAP1 MGC128271 Mof4 family associated protein 1 EMBV3_18868 ATTGCTGCATAACACACTTATATTGAGAAAAAGGACCGTGCGTCTCCCCAGGGTGAAAGC Gene BVT0102_326901 + 0 NULL GK000003.2:118131089-118134022 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29227 GTGGGCTTCACCTCTGTGCCACAGGGACAGGTTTCTGAAATCAAAGTTGATTAACACAAA Variant GeneID:511690|ST6GALNAC2:NM_001075533:380_cdna 717^820 3 EMBV3_26639 GeneID:511690 19 GENE ST6GALNAC2 MGC139669 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 EMBV3_02672 CACTCTTGAGGACACCGTTCACCTGGGGATGTGCCTCCTGCAGGGCAGCAAACTCCACAC Gene GeneID:100141109|LOC100141109:XM_002693448:113_cdna Constitutive 0 NULL GeneID:100141109 15 GENE LOC100141109 NULL hypothetical protein LOC100141109 EMBV3_25252 GGAGAGTCAGAAACAAACTTATAGTGATGCGTTGGAAGGTTAATCGAAACCATCCTCACC Gene GeneID:532320|WBP5:XM_002699837:20_cdna Constitutive 0 NULL GeneID:532320 X GENE WBP5 NULL WW domain binding protein 5 EMBV3_30043 TGTCACCTTTTGGAGAGAAGTTGCATTTCTGGAAGTGATGAGGCAGGGAGAGAACAATGG Gene GeneID:538619|HEY2:XM_002690063:24_cdna UTR3_Alt 1 NULL GeneID:538619 9 GENE HEY2 NULL hairy/enhancer-of-split related with YRPW motif 2 EMBV3_36684 CCCTCCAAGACAAACGAAAAGGTCGGGTTTCACAAGTGTTCCTGTGCTTGTATTCAGTCC Gene BVV0101_050130 - 0 NULL GK000019.2:26741789-26761839 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096016 TCONS_00096012 TCONS_00096013 TCONS_00096018 TCONS_00096015 TCONS_00096014 TCONS_00096017 1 XLOC_057859 Coding TCONS_00096013 XLOC_057859 Coding Coding RABEP1 19:26759899-26838445 j TSS71442 5040 1 TCONS_00096013_5 778 17 0.936049398434019 6.1079003457342e-06 1.4242533935097e-06 1.24563508612919e-06 0.00157411576448395 0.00214763704667049 0.000611815216910565 0.00180035778332821 0.00306429530536107 0.0035525473165596 0.00104318754251506 0.00013366468029978 0.000211505755798559 0.000294723899254773 0.00079004765450233 0.000261317704541235 0.00919879610180195 0.00632536014214094 7.42340047522348e-14 0.00183985428338107 4.80816146234778e-08 7.14908142203721e-08 0.00312279305599978 0.00105222502292052 0.00293102187189099 8.09787911081641e-08 0.00217706925516457 0.000122208559513586 0.00075800621583056 0.000296348926618488 0.00096288262850779 XM_005220197.1 RABEP1 PREDICTED: Bos taurus rabaptin, RAB GTPase binding effector protein 1 (RABEP1), transcript variant X1, mRNA. 0.0 9010 100.00 0.991071428571429 NM_004703.4 RABEP1 Homo sapiens rabaptin, RAB GTPase binding effector protein 1 (RABEP1), transcript variant 1, mRNA. 0.0 5288 83.41 0.991071428571429 TCONS_00096013_5 sp|Q15276|RABE1_HUMAN RABE1_HUMAN Rab GTPase-binding effector protein 1; 0.0 1527 97.17 0.998714652956298 2 coding 0 0 0 0 -0.913032588099316 0.0655570816449274 -0.0685075457729449 0.245657272535357 CACAAGCTGAGCAGCACGGCCTTAAAACAAAACAAAAATAGATAGGATCTGAAGAGGCAAAATGCAGTTTTACAAGCTGCACAAGATGATTTGGGACATCTTCGGACACAGTTGTGGGAAGCCCAAGCAGAGATGGAAAACATCAAGGCCATTGCCACGGTGTCTGAGAATACCAAGCAAGAAGCTATAGATGAGGTGAAGAGACAGTGGAGAGAAGAAGTTGCTTCACTTCAGGCTGTTATGAAAGAAACAGTTCGTGACTATGAGCACCAGTTCCACCTTAGGCTGGAGCAGGAGCGAACACAGTGGGCACAGTATCGAGAATCTGCAGAGAGGGAAATAGCTGATTTAAGGAGAAGGCTGTCTGAAGGTCAAGAGGAGGAAAATTTAGAAAATGAAATGAAAAAGGCCCAAGAGGATGCTGAAAAACTTCGGTCTGTTGTGATGCCTATGGAGAAGGAAATTGCAGCTTTGAAAGATAAACTGACAGAGGCTGAAGACAAGATTAAGGAGCTGGAGGCCTCAAAGGTGAAAGAGCTGAATCATTATCTGGAAGCTGAGAAATCTTGTAGGACTGATCTAGAGATGTACGTAGCTGTTTTGAATACTCAGAAATCCGTTTTACAGGAAGATGCTGAGAAACTTCGGAAAGAATTGCATGAAGTTTGCCATCTCTTGGAGCAAGAGCGACAACAACACAACCAGTTGAAACACACATGGCAGAAGGCCAATGACCAGTTCCTGGAGTCTCAGCGTTTGCTGATGAGGGACATGCAGCGAATGGAAATTGTGCTAACTTCTGAACAGCTCCGACAAGTTGAAGAACTGAAGAAGAAAGATCAGGAGGAAGATGAACAGCAAAGACTTAGTAAGAGAAAAGATCACAAAAAAACAGATGTTGAGGAGGAAGTAAAAATACCAGTAGTGTGTGCTTTAACTCATGAAGAATCTTCAGCTCAGTTATCAAATGAGGAGGAACATTTAGATAGCACCCATGGTTCAGTCCATTCTCTGGATGCAGACTTACTGTTGCCATCCGGGGATCCTTTCAGTAAACCAGACAATGATGTGTTTAAAGATGGACTCAGGAGAGCACAGTCTACAGATAGCCTGGGAACTTCAGGCTCGCTGCAATCCAAAGCTTTAGGCTATAACTACAAAGCAAAATCTGCTGGGAACCTGGACGAATCAGATTTCGGACCGTTGGTAGGAGCAGATTCGGTGACTGAGAACTTTGATACCGCCTCCCTTGGGTCACTGCAAATGCCAAGTGGGTTTATGTTAACCAAAGATCAGGAGAGAGCAATCAAGGCTATGACACCGGAGCAAGAGGAGACGGCATCCCTCCTGTCGAGTGTCACACAGGGCATGGAAAGTGCTTATGTGTCCCCCAGTGGCTACCGCCTAGTCAGTGAGACAGAATGGAATCTCTTGCAGAAAGAGATACACAATGCTGGAAATAAACTTGGTAGACGCTGTGATATGTGTTCCAATTATGAAAAACAATTACAAGGAATTCAGATTCAGGAGGCTGAAACAAGAGACCAGGTGAAAAAACTACAGGTGATGCTAAGGCAAGCAAATGATCAGTTAGAGAAGACGATGAAAGATAAACAGGAACTGGAAGACTTCATAAAGCAGAGCACTGAAGATTCCAGTCACCAGATCTCTGCACTTGTCCTAAGAGCCCAAGCATCGGAAATCTTACTTGAAGAGTTACAGCAGGGGTTTTCCCAGGCAAAGAGGGATGTTCAGGAACAGATGGCAGTGCTGATGCAGTCACGGGAACAGGTTTCAGAAGAACTGGTGAGGTTACAGAAAGATAATGACAGTCTTCAGGGAAAGCATAGCTTGCATGTGTCATTACAACAAGCAGAAGACTTCATTCTCCCAGACACTATGGAGGCACTCCGGGAGTTGGTATTAAAATACCGTGAGAATATCGTTAATGTGCGGACAGCAGCGGATCACATGGAAGAGAAGCTGAAGGCTGAAATACTTTTCCTGAAAGAGCAGATTCAAGCAGAACAGTGTTTAAAAGAAAACCTTGAAGAAACTCTGCAGCTAGAAATAGAAAACTGCAAAGAAGAAATAGCTTCCATCTCTAGCCTAAAAGCTGAATTAGAAAGAATAAAAGTAGAAAAAGGACAGTTGGAGTCCACATTGAGAGAGAAGTCTCAACAGCTTGAGAGTCTTCAGGAGATGAAAATGACATTGGAAGAACAGCTGAAGAAAGAAACTGCTGCTAAGGTTACTGTCGAACAACTAATGTTTGAAGAGAAGAACAAAGCTCAGAGGTTGCAGACTGAACTAGACGTCAGTGAACAAGTGCAGAGAGATTTCGTAAAGCTTTCTCAGACCCTTCAGGTGCAATTAGAGCGGATCCGACAGGCGGACTCCTTGGAGAGAATCCGGGCAATTCTGAATGACACCAAACTGACAGACATTAACCAGCTCCCCGAGACATGACACCCTCATGGCAGGACTCTAGCCTGCACTTCGGGTTTTTAACTCATCTTTAGAGCAACATTAATTATTATTTAACTCTTAACTGAAGAAGTCACACACACAAAAAGGAAGACTGGAGCAATGTTTAATTCTAGTGGGAGGAGACTGTGCAGCACAGGAACAGCAAACAGCCAGGGTAATTTGCAGCAAAAAGACCTTTCAGACGGGAACACTAACCAGACTCCAGACTGGATTCCAGCGAGTGTGGGATCAGACTTGGTGACGGAGAAAGTGCTGTTTCCTTGCCTGCCTTATCCGACATTTCCCTGCCCTAAAGCACCCTTCTAATAGTGTTTGAAATGACATTTCCTGTTCATAGATGTTGGAAAAGAGAATTTTTTTTCCTGTTGTCTAGAGTTCATCAGTAAACAGTATTCAGCTAGCAGACAGGTGTAGTATGCGGTATGAATATTTTATATTAAAATATGAAGTTTGAGAGCAGGCCATTGGCTAGTGACTGTATTTCCTAGCTCAGTGTATTTTTTTTAAACCATTTTATCTTGTGTTGGTGGACCTTAAATGCTACTGAAACTTGCCTGAGAACCATAAGACGGTGGCAAACAAAATCAATTCAGTTGGAACTGAATTAAGAGAATTTGAAAACTTGGCTGGGGCTATATGTATTGGAAGTTGAGGTTAAAGGAAAAGCACAAGAAACTGTTTGGAAGCACTTTTTCTGCTACCTGGTAAATTTCGTGGACCCACAGGTACCAGGGTCAAGCTGAACCCACACCATCTACTCTTGAAAACTGTTTTAGTTATTGGATCAGTGGAAGAAACATTAATAAAACAAGCTATGTCTGACAACACCTAGTATAAATGTATAAGTCTGCTGCTTATTTTATTTTCAACTTGAATCAGTGGATTTGAGTACTATTTGTTTCAAAAGTGTCAGATACAAAAATGGTGATAACTAGGTTTGGCAGATACCTGTTTTGTATTTTTCTTTTGTATTTTAGACCTGGAGTGTGATGATGCTTATGGTGAAGTTGGGGAAACCCACCTAGTTCATCAGTTTGGAAATCTGCTTTGTCATTTCTATGAGGTTAAATTCCGTTCCTGTGTGGAGAAAGCGTCAGTGGACAGGTTGTCTTTGCCGTAGCCTTATGAAGTGTTGCAGAAAGCACAAGAATGGATGTGTGTTCACTGTTTACCTGCAAGTACTGTTAGCCAGTGGAAGGCTATGCTGTTTTATCAATAATTCATCATACAGGTGGTTCAAGAGTAAAACTCTTATTTTCAAGTACTTTTTGTGATTTGGTGGTGTGAAGGAACTATGTGGGAATTAAGTGGATTAGGTAGATTTTCTGGCTCAAGTAAACCTACAACTTGTCTTTGTTATAAATGAAGTCATAATGAACTAGCCCTAAAGATCTTTATTTCTGTCTTCCATAAGACAAGATATGGCCTACATACCTCATTCCTTGGGCTACTGCTGTAGTCTTACATTCATGATTATGAATTTGAAAGTAAATACTAATTATGGAAATAGTGCTATAGGCCTGCATGCCTGAAACATTTTAATTGGTTTAAAGTCCTTTTGTAGAATGGGGTACTTGATTTCCTTTAAAGGAAACATGTTTTCTCATTGAATTACAGGGAATTTTTATTAATTCCAAAAATGCAGTCACTTTAAATTATGTAAGTATAAGATCAGTTCCTTGGATAAACTCCAGGCTCATTTGTTTTAGGTTATTAAAACTGGCACTGTAGTAAATCAAGGTGGATAATTCATAATCTTCCTGAATGAACTGAACTACAGCTCCCAGGGAACTGCTAGGCTGAGACTGGGCACCTTGCTCATGTTTTTCTCCATAAGATGGTTCTGGGCCAATAAAATCATGATTAGGAAAGTGTGAGCGTCTTTACAGTTGCAGATGCAAATTGTTGGAACCCACTTTTTGGAGAAAAATCTGCTAGAAAAAACAGACTAGGTTTTGTTAACAATCTCTTTCTGGTATGAAACACCTCTTTAAACTGGGTTTTCTGTATAAATGGGAAACTGATTTGGAAGGCAGTGTTTAGCCCTCCAAGACAAACGAAAAGGTCGGGTTTCACAAGTGTTCCTGTGCTTGTATTCAGTCCATGTACACATGTTCCCACGCATGTCTAACCTGATTTTACCCCTTACCTGTAACCTACCTTACCACGTGGCTTCTCATCGGCAGTCACTTAGCCATTTCTAGGCAGGTATAGTATTACCTTTCGGAACTCATATTTGGCAGGTATAAAAATATTAAAGCTAAAGGACAAAACCATATACTGTATACCAAGCTCTGTTTCTCCATTTGAGATCCTACATGTGCACCTCACACCCATCAGTGACATGTATGGGGACACAGCACAGTCCAACTCAGCTCTGAAAGGTAATACATGCCTGTCATGGAAGTGAGCCAGCGGTGGCCTTGCAACCGTGGAGCCTGAGTTCCGCTCTGAAATCTGTATTTCAGATTTCAGGTATAACCATTTGTTAACTGTACTGGAGGTGTGTCCTTAAGAAGTGTTCAAATTAAAAAAGCTGCTGCCTAGTAT EMBV3_28652 TTATCTTGCAGTTCAGTAACAATGAGCACATGTTAGTCTTTTAAAAGGCACTTCTGGTGC Gene BVV0102_416268 + 0 NULL GK000014.2:29759097-29764727 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053102 1 XLOC_031648 Coding TCONS_00053102 XLOC_031648 Coding Coding TTPA 14:29763401-29793700 = TSS39244 2679 1 TCONS_00053102_1 282 5 0.911743349396 2.53932459504045e-06 3.75081487953628e-06 3.45427074512887e-06 3.09971382034868e-06 0 6.6761000789401e-07 2.17682197598979e-06 0 0 1.53583352950049e-06 2.47531398728387e-06 0 0 5.2676302290175e-06 3.83758190546496e-06 0.001321070121357 0.000557746287330109 0.000721162908946529 0 0 0 0.000742344198962056 0.000611261318788902 0.000988732709116763 0 0 1.31223986410299e-05 7.88779104331596e-05 0.000130470830167931 0.000113706756257852 NM_001206676.1 TTPA Bos taurus tocopherol (alpha) transfer protein (TTPA), mRNA. 0.0 4832 100.00 0.999626726390444 NM_000370.3 TTPA Homo sapiens tocopherol (alpha) transfer protein (TTPA), mRNA. 0.0 1270 80.38 0.518477043673012 TCONS_00053102_1 sp|P49638|TTPA_HUMAN TTPA_HUMAN Alpha-tocopherol transfer protein; 5e-176 492 88.13 0.978723404255319 2 coding 0 0 0 0 -0.0605072419550422 0.658274502055215 -0.0144858712790585 0.797049251936211 ATGGCGGAGGCGCGGCCGGGGCCGGCGGGGCTGCAACTCAGCGCGCTGCCCGACCACTCGCCGCTGCTGCAGCCCAGCCTGGCCGAGCTGCGGCGCCGGGCCGGGGCGGCGGGCGCTCCGCTGGCCGGGTGGCTGCTCAGCGACGCCTTCCTGCTGCGGTTCCTGCGCGCCCGGGACTTCGATCTGGACCTGGCCTGGCGGTTACTGAAAAATTACTTTAAGTGGAGAGCAGAATGTCCAGAAATAAGTGCAGATCTCCACCCTAGAAGCATCCTTGGCCTCCTGAAGTCAGGCTACGTCGGTGTCCTGAGAGCCCGAGACCCCACCGGCAGCAAAGTTCTGATTTATAGAATTGCACACTGGGACCCAAAAGTTTTCACAGCTTATGATGCATTTCGTGTGAGTCTCATCACGTCGGAGCTTATTGTCCAGGAGGTAGAGACACAGCGAAATGGAATCAAGGCTGTCTTTGATTTGGAAGGCTGGCAGTTTGCTCATGCCTTTCAAATTACCCCCTCTGTAGCCAAGAAGATTGCTGCTGTTCTCACAGATTCCTTTCCATTAAAAGTTCGTGGTATCCATTTGATAAATGAGCCAATAATTTTCCATGCTGTCTTTTCCATGATTAAACCATTTCTGACTGAAAAAATTAAGGAACGGATTCATATGCATGGGGACAACTACAAGCAAAGCTTACTCCAGTATTTCCCAGACATTCTTCCACTGGAATACGGTGGTGAAGAGTACTCCATAGAGGACATCTGTCAGGAGTGGACAAATTTTATAATGAAGTCGGAAAATTATCTCAGCAGCATTTCACAGACGGTTAAAGGAGAAGAAGTTACTTGATGTGAAAGGTTTCCTGATTAAAAATTCATGACTGAGATCCTATCTGGTTATATGAATGAAAGGAAGGGAATCTTTAAATTAATGCTTTTCTGATTTTTTTTTTTTTAATGTAAAAATCTTTTAACTTGAGCAACGTGGGTATTTGGGAAACTTCTTTACTTTTTAAGTATCTTTTCTTTACCTTAGAAGTAATTAAATGTTAGTATACCTTAAAAGCATAGAAGAGGTTCCTTTTTTGGCATTTGAAAGAAAGTTATCTCTGAAGTACCGTCATGTGTACATTTGTGTTTACAGTTTTATTTTTAAAAACTTTTCTGGTTATATAGGTTTAATTATAAATGAATACATAGTCCACTGAAGAGAAATATTAGCACAAATCAACTGACTATAAAAATCTATTCACACTTTTTTAGGTGTGTCAGATGAGACTATAATTCAGATTGAAGTCTGAGTACAGTTTTACATAGTTATTTCCACGGGCCACCAAGCTAGTTCACCTCAGGGAAATTCTATTTAGCATATCTGCACAATAGAAACTTTTGAATGAAGTCCATATGCAATAAACTATTATACGCTGCATCAGGTCTCTAGGAAATTATTCATGTTGATACAATTAACTCCATAGAAATTCAGAGATGGAATAATATTTGGTTGCCATATACATGGACTCTATTTTTAACTAAACAGTAACATGATTACACAAGGGGAAGGAAATGTTTACATTGTAAAATCAGTCAGTTACATCTGGAACTTTTCAGACTATGCATGAAATAATTTAGGTTTTACTATATTATCAGAACATTCTAGCCAAATCCTACAATTCATATTCACTTAAAAAAATCAGTAGTTAAAATGTGCTGTTTGTACTGTAGCTATGTTAATGCATATTTCATTTATTGAGAAAGATATGTCAATATAACTTTCAATTTATGACAATTTTTACAGTATAATTTTGAATTTTATTTTAAACCTAATGAAAGAACACAGGATACAAAATTTGTTAAACATGTTTTAGCTTAGTTGGGTTTCAACATTAATCATACAATATTAGCTTTGTGAAAGACTATGTAAAGGCTGTTTTTCTTTATAAGAAAATTATTCTAATCAGATGAGTTGGTACTTATGATTCTTTGTACATACATCTGTAAAAAATCAAATGATTATGAATGTTCTTTAGAGAACGTCTTTGTGATTTAGCATTGGGAAGCTAACTGTACATTATAATTTTTGTTAAAAAAATTAGATCATGCTTGTTTTCTAAAAAATGATAAAACCTTTATAAAATCATAAATTTAAAACTGTTTAATTAAAAATAACAGCAGAATAAAAACACTTAAAAAGTGTAAATAACAGCAACAACAAAAAGCTCTAGTTTACCCAACTTTTATTCTTACATGGTTTACATCACAAAGTTCCACTTCATTCACATTTTGGGAACTTAAACCACTTTCTTCTGACTCTATAAAGGAATGATTACTTTAGCACAATAGATAGTATTTTTAAATGTCTTTTAAATATTATTCATGGGTGATGTTATTAACAGTAAATAGAATTAAAGTAAGTCAATCAACAGAAGTACATTTCATGATAGGATTTTGAATTTTTTATGGAATGCAGTGATTCACTGAGGAACATTACAACAATGTAAAATAAACAAGCAGTTTTATAAGGTGGCACGATAAATCACTATTGAATTGTCTCTATTACTTTACAGTAATTGCACCAGAAGTGCCTTTTAAAAGACTAACATGTGCTCATTGTTACTGAACTGCAAGATAATGTTTGTTCGAATATTGTTCAAAACAAAATAAAGATTTTTCACTCAAACTA EMBV3_41539 AGGATCACTGCCTAGCACCTAGCCGACGCCAAGCAAATAGTAGGCACTCGAAGAAGGTTT Gene GeneID:514271|TMEM106C:NM_001034461:72_cdna Constitutive 0 NULL GeneID:514271 5 GENE TMEM106C MGC127063 transmembrane protein 106C EMBV3_40296 CCCTGAAGGTGGAGCCCTCTGCGCTTGAGGTTGATCAGGGTGTCCTGGATGAAGAATCTA Gene GeneID:507462|SNX16:XM_002692833:192_cdna UTR3_Alt 3 NULL GeneID:507462 14 GENE SNX16 NULL sorting nexin 16 EMBV3_19786 TGAAAGCTCTGGATGCTATCCGTGCCTCTGGGTCAAAGCACGAAGTGGGAGCTCTCAGCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29459 AGACGAACAGCCGGTACTATATCTGGTTGTGGCTGTTGTAGATGTACTCCAGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_10726 AAGTCCCAACTCTATCTGTTTGTTAAAAAGAAAAGCAATATAATCCTTACCTAGAGAGAG Variant GeneID:507215|TNFSF10:XM_002684917:43_cdna 297^339 1 EMBV3_43063 GeneID:507215 1 GENE TNFSF10 NULL tumor necrosis factor (ligand) superfamily, member 10 EMBV3_03174 CAACCCTTTTGGCCTACCTGAGAAGAAAGTCCACTTTTCTGCCAATGCCTGCCTGGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17624 CTTTAGCTGTGGCCTGGCAGTATATAAATGGTGCTTTATTTAACAGAATACCTGTGGAGG Gene GeneID:534067|USP34:XM_002691422:416_cdna Constitutive 2 NULL GeneID:534067 11 GENE USP34 NULL ubiquitin specific peptidase 34 EMBV3_36515 CAGGGTGACCTGAGTGTGTGTGTGCTGTCAATGAAGGCCGTCTCTTTGGGAAACCAAGGA Gene BVV0102_135291 + 0 NULL GK000016.2:79155004-79333028 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08932 CGGTGCGTGACGGGCGAGGGGGCGGCCGCCTTCCGCCTGGGCGGGATTCTGACTTAGAGG Variant GeneID:781039|LOC781039:XM_002685429:32_cdna 193^371 1 EMBV3_11851 GeneID:781039 2 GENE LOC781039 NULL similar to pericardine EMBV3_05913 TCTTGAGTTTCTGAGATGGGAGCCCTGTATCATCTGTGGGGTCGCAAAGACTTGGATACG Gene GeneID:511654|CHAF1B:NM_001098014:33_cdna Constitutive 0 NULL GeneID:511654 1 GENE CHAF1B NULL chromatin assembly factor 1, subunit B (p60) EMBV3_43026 GCCGGATCAGCTGCCCGGCACCCGGAGTCGGACCGAGATGTCCAGCTGTCCAAGGCTCTG Variant GeneID:510729|TRPT1:NM_001166602:575_cdna 61^147 1 EMBV3_07122 GeneID:510729 29 GENE TRPT1 MGC128502 tRNA phosphotransferase 1 EMBV3_40003 TACATGAAGTCTGGTGGAGTGCCTTCAATTCTCCCTCTAACTAGGCCCCTTGCTTTACCC Gene GeneID:515865|MGC151908:NM_001075728:64_cdna Constitutive 0 NULL GeneID:515865 10 GENE MGC151908 NULL transmembrane protein C14orf176 homolog EMBV3_39584 GCTATAGGACAGCCGCGTATCGGAATCTTAGTGTGAATCCTTCCGTTTAGCTAGCAACCC Gene BVV0102_292278 + 1 EMBV3_12630 GK000030.2:96269468-96362879 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245235 TCONS_00245232 TCONS_00245234 TCONS_00245233 1 XLOC_150663 NonCoding TCONS_00245232 XLOC_150663 NonCoding NonCoding - X:96285037-96362868 - TSS184120 1545 3 TCONS_00245232_2 71 0.0828478964401295 4 0.980200436849544 0 0 7.75582714259268e-186 3.81851858442227e-205 0 0 0 0 0 0 4.45158313997219e-06 0 0 0 0 0 0 0 2.48515019858147e-321 0.00045564920206108 6.39919387624576e-06 0 0 0 4.58967599653823e-139 0.000158462759939106 4.83065844934956e-06 0 0 0.000648197471217943 XR_240581.1 LOC101905792 PREDICTED: Bos taurus uncharacterized LOC101905792 (LOC101905792), 3e-09 68.0 81.43 0.0446601941747573 NM_031407.6 HUWE1 Homo sapiens HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase (HUWE1), mRNA. 2e-62 244 72.77 0.253074433656958 0 noncoding 0 0 0 0 -0.00731495498882567 0.94355380726398 0.011840827311006 0.796850171966459 GGTGGTCTGTCAGTAGTAACTGTCATGCGTAGTGCTTGTGCCCTCCACCCTAAGCCACTTGCACCATGTGAAACTGTCCCATTGGCGGGGATGTGGGACACGGTGAGGAGACCTTGATCCGTCATCACAGGGAGCCCAAAGATGGCTCAGGCCCTCGAAGAGACTGGCAAAGGGGCTCAGAAGGTAGGAACCCAGAGTCTAGCAAAGGGGCTTGGCAGGGGGCAAGTTCCCCTTTTATTTCTGCCACTGCCAAGTGAGGAAGAAGAGTCGCCTGCTCTGGAACCAAGGACTGGACGGTGATCTACAGGCGTCACCCATTCTAAGCAAGTCAACGGATTAAATATGATTTTTATTAACTCAGTCTTCTTTTTTTAGAGGGGTTGCTAGCTAAACGGAAGGATTCACACTAAGATTCCGATACGCGGCTGTCCTATAGTTCTGATCGAGTATGGGAAGATAAGACTCAGCGAGAAGGAGGGCAGCAGGGGCGCGGAGATGAACAGGTCTGGCTTTGCCAATACCCACCCACTCAGCACATCTTCCCTTCCGGAGCGGTTCGCGGCATCTGCGCATGCTCCTTCCGCCCATGTCAGGCCCTCCGAGGGGTCGCGCTGTGCTCTGTGGAGGTGGGGTCTGCGCATGCGCGTCCTGCTCGCCCCGTTCTGCCGGAGGGGCGGGAGAGTCAGTTGTGGAACTGGCCAGTGCGATTGAGGGGACAACTGCGGCCAGACCCATAGGAAGTGACTGTTAGGAGATGTGGACAAAGCGGCGTGCGACAACAACAGGTCACAGAGAGAAGAGGAGGGGTGCGGCCGCCCGGGGCAGTTTAGGCAGGCGCAGAGTCCTCGACGGTAGCGCTTGAGTAAAGCAGGACTTCACATTCAAGGCAGTCTGGCTCCAGAGTCTGCACTCCTCTAAGAGGACAACCTACAGATGTACACAATCTACAATCTGGGGCGAAGACTGCAGCCATGTACTGCCCGTCATCCACAACACACAGTGAGGTGTCGCTCCAGGACCTTGCTTCAGACATGCTGGAACCATCAAAGTTCTTAGATCAACTTTAAGTGCTGGATGGAGTAAAAAAAACCCACAAGAGACTATTTGTCGATCTGTGAACAGATCTGACAAGAAAATGCAAAACAAAATCAAAAAGGATGCAAAGACTGTTCTGGGGAGCCAGTCAAATTATTTATTAAAATTTGTTAGAAGTAAACTAAAACATTAATAAATGAAATCAAAATTTTAAACTGAGCTCCAGACTTGAAACTGTTACAAAGGCTCAGGATATAGAACCTTCGGTTGGGTTGAGAGAATTCTCTTAAAACCTGCTGGTTTGTTCCCCTAGAGCAAGGCGGTGCTTTGTCCTTAGCTACAATCTCTAACACCATCACCACTCCCAAGTGTAGATGCCATTCTGAAAAAGATCCCCTCAGTTCCTGATGACCCTGAAGGAGGAGGATGCACCAGTGTGGTAACAAAAATGGCTTTCTGGAGAGTCCATTTGGATTTGTTCTCCAGCCATCTAGAATGTGTTCAAGAGGT TCONS_00247759 r 5' 0 TCONS_00247737 TCONS_00247738 TCONS_00247739 r 5' 15571 EMBV3_10390 GACCGGTAGTCGTCTCTGCAGTGACTCCAGCACCGCTGTTTCTTGGTGTGCACAAAGATA Variant GeneID:516578|TBP:NM_001075742:8_cdna 87^231 2 EMBV3_27749 GeneID:516578 9 GENE TBP NULL TATA box binding protein EMBV3_15911 CAATTCAGAACAGCCAAGAGGAGAGACTCATAGGGTGAGGTTCAGAGAGTCCCAAAGGTG Gene BVT0102_029475 + 0 NULL GK000019.2:28886402-28908978 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25328 CCCCTGGATGATGATTAGGCTGCATCATGGAAGTTTAATGTGGTCTATTGTGGACCTACC Gene GeneID:618359|LOC618359:XM_002684627:127_cdna Constitutive 0 NULL GeneID:618359 1 GENE LOC618359 NULL hypothetical LOC618359 EMBV3_32866 TGAGGCCCGAGAGCTGCTAACACTGGTACAGAACAGCTGGAGAAGACTGGAGGGGTTGGA Gene GeneID:530599|LOC530599:XM_002697078:601_cdna Constitutive 0 NULL GeneID:530599 22 GENE LOC530599 NULL similar to laminin, beta 2 EMBV3_38976 CACTCTGTGGCGCAATATCCCTATTTGTAGCTTGGTTCCAGTGACAGAAGCAAGCGTTAT Variant GeneID:507986|MOCS2:NM_001014867:64_cdna 453^603 5 EMBV3_16024 GeneID:507986 20 GENE MOCS2 NULL molybdenum cofactor synthesis 2 EMBV3_37766 GCCCAATGCAATTCTTGCCTTTAAACGAGAGGGCTACAGACCCTTTGACTTCAGTGCCAG Gene GeneID:514230|L2HGDH:NM_001101090:58_cdna UTR3_Alt 2 NULL GeneID:514230 10 GENE L2HGDH NULL L-2-hydroxyglutarate dehydrogenase EMBV3_29485 ATGAATGTGCTGCGGTGATTCTCCATTCGCCTCTGATGTCTGGATTGCGTGTGGCTTTTC Gene GeneID:520956|FAM108C1:NM_001099014:39_cdna UTR3_Alt 2 NULL GeneID:520956 21 GENE FAM108C1 MGC152409 abhydrolase domain-containing protein FAM108C1 EMBV3_19138 AGGTGCGCGGGCGTGGACCCGCTGGCCTCGCATCTGGCATCCCTGACTCAAAGCTCGTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00862 CGGGCGCTGGTTCATCTACTGCAAGACCAACCCAAAGCACAAGCAGAGACAGATGTAGAA Gene GeneID:504663|MRPL36:XM_002696463:84_cdna Constitutive 0 NULL GeneID:504663 20 GENE MRPL36 NULL mitochondrial ribosomal protein L36 EMBV3_16483 CATGGGTTAAACAAAGGCCTGCCTACAAGAATGACTTCTCTCTACTCCAAGAGCTTACAC Gene BVV0102_236063 - 1 EMBV3_26772 GK000006.2:90996783-91054195 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23714 CCACACTGACAAAGACGCCATGGTAAATATTGTGAGGATTACAAAGGAGAACTGAGCACC Gene GeneID:513673|LOC513673:XM_002684821:135_cdna UTR3_Alt 2 NULL GeneID:513673 1 GENE LOC513673 NULL similar to serine/threonine kinase EMBV3_30662 ATCCACTCTTTGTATCGCCGCACAGGTGCCAGCTTTCAGAAGGCCCAGCAAGAGTTTGCA Gene GeneID:539670|SCAMP3:NM_001035426:192_cdna Constitutive 0 NULL GeneID:539670 3 GENE SCAMP3 MGC126960 secretory carrier membrane protein 3 EMBV3_35701 GCGCTGAAGGGCTATTGACGCTCAGGCCAGAAAGAACTCAGATATATACTTATCCCTCAA Gene GeneID:522400|KRT80:NM_001077952:12_cdna Constitutive 0 NULL GeneID:522400 5 GENE KRT80 MGC143286 keratin 80 EMBV3_19863 CGAGGCCTGGAACATCAACTCCACCGACCTGGTGGAGGGCAGCTCGGCGCCCGAGCTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30790 CAGCAGAGTTTTTCCCTCTCTTTTTAATTGGTAGCAGCACAATCTGTAACAAGGTGAGTC Gene BVT0102_446343 + 0 NULL GK000004.2:69034393-69252419 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188300 1 XLOC_114343 NonCoding TCONS_00188300 XLOC_114343 NonCoding NonCoding - 4:69054887-69055555 - TSS140668 668 2 TCONS_00188300_1 37 1 0 0.000203678061152843 9.0255420368404e-05 5.54131055490539e-05 0 8.13008600000791e-05 0 0.000148411698593576 0.000433864359191034 3.54347770616333e-05 0 1.02807709611047e-05 0 0 0 0 0 0 0 0 0.000129187405244767 9.08897915976487e-06 0 0 0 0 0.000769938645344759 0.000210508276178723 0 0 0 0 noncoding 0 0 0 0 CTGTGCAGAATTCATAGAAGGGGAGTAGTCTGATGAGTTTGTATTAGTCCGGGGAAGCTTCGTGGGGCAGGTGAGGCTTAGGGGAGGCCTTGAAAGCAGGTTATTGACTGGCCCAGAGGTCAAGGAAACAACTGATGTAAAGCAGAGGCCCACCTGTCCCCAATAGGGAGCTGTCGCAGAGTTGCTGGAGGAGAGAATGCGCTTCACACTTCCAAGAGGAGCAGGACCAGGCTGGCTTTAATGGCTGGGGACAGTGAAGCCAGCCCATGCTCCTGGATAAAATGGATACCAAGATCGGGACTCCAGAGTAAGGCAAAGTCTTCATGCAAGGGACATGTCTATCTCCTCATTTGACCTCCACACTTGATGATTCCTCAGAAATGGAAAGAAATTAGGGCTTTTCTCCTTTTCATTATATTAGAGGGGAAAAACACACAAAAAAATCCACCAACCCTGCCGATTTGCTAGATATTCTTGGAAGGATAATAAAAGTAAAACTTTCTTTCTCTTTCAGCAGAATAGAATTAGACTCACCTTGTTACAGATTGTGCTGCTACCAATTAAAAAGAGAGGGAAAAACTCTGCTGAAACATTCTCCACTTTCCAGCTGCTTTTATTTAATCCATGTAGTTTAAATTCTCCAAGGACCTTAAACTAAATTGACCACC TCONS_00181889 TCONS_00181890 TCONS_00181892 TCONS_00181893 TCONS_00181894 TCONS_00181895 TCONS_00181896 . 3' 20496 TCONS_00181889 TCONS_00181890 TCONS_00181892 TCONS_00181893 TCONS_00181894 TCONS_00181895 TCONS_00181896 . 3' 21163 EMBV3_43005 AGCCCACCCCTTTTGAGTGTCTTAGTGGACAAAGCTCCCTCCTTCGCCTCTGAAAGGTTT Gene GeneID:510085|SLC16A3:NM_001109980:66_cdna Constitutive 0 NULL GeneID:510085 19 GENE SLC16A3 MCT4 solute carrier family 16, member 3 (monocarboxylic acid transporter 4) EMBV3_17762 CGAGCTACTCGGGGAGGTGGAGCGCACGGAGTTCGAACAGTACCTGCACTTCGTGTGCAA Gene GeneID:534010|SOX17:XM_002692649:64_cdna Constitutive 0 NULL GeneID:534010 14 GENE SOX17 NULL SRY (sex determining region Y)-box 17 EMBV3_23954 GAGTTCATGCTTATGAATTCCCGACTTCAGGTGAAGCCGAGAACATACTGGAAACAGAAA Variant GeneID:512609|C8H9ORF46:NM_001034426:53_cdna 327^567 2 EMBV3_36488 GeneID:512609 8 GENE C8H9ORF46 MGC126999 chromosome 9 open reading frame 46 ortholog EMBV3_38603 CAGAAAACATCCAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGCAAACCCTATTCCT Gene GeneID:338051|PAPOLA:NM_176647:151_cdna Constitutive 2 NULL GeneID:338051 21 GENE PAPOLA MGC127552 PAPOLB poly(A) polymerase alpha EMBV3_28884 CCTCAATCTAGTTTATGAAACAACTGACAAACACCTCTCTCCTGATGGCCAGTATGTGCC Gene GeneID:415112|AGR2:NM_001040500:11_cdna Constitutive 0 NULL GeneID:415112 4 GENE AGR2 MGC128276 anterior gradient homolog 2 (Xenopus laevis) EMBV3_01991 AGTTTCTCTGAGCTTCAGGAGCAGTGTTCATCTCAACCTCGTGGCCTGCTTTCCGTGTGT Gene GeneID:509439|NECAP2:NM_001015562:108_cdna UTR3_Alt 4 NULL GeneID:509439 2 GENE NECAP2 FLJ10420 MGC134076 NECAP endocytosis associated 2 EMBV3_38954 AGCTGCTCTGTTTATTGGATGGGCAGGAGCCTCACTCTGCCTAATTGGTGGTGTCATATT Gene GeneID:506545|CLDN10:NM_001014857:43_cdna Constitutive 0 NULL GeneID:506545 12 GENE CLDN10 MGC179447 claudin 10 EMBV3_05304 GAATCGGCGGGAATCCATGAGACCACCTACAACAGCATCATGAAGTGCGACATCGACATC Gene GeneID:281592|ACTA1:NM_174225:2_cdna Constitutive 0 NULL GeneID:281592 28 GENE ACTA1 NULL actin, alpha 1, skeletal muscle EMBV3_27810 CCATCTTACCAGCATCTATTGAAACAGCACTGGCTGTGGAAGCCAAATATCGAGGAGATG Gene BVV0102_286061 + 0 NULL GK000003.2:74462381-74488313 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29253 GGCATAGTGACAAAGGCACCGAGTCAAGTGTCATTACCTAATTCGTTTCCATCCCAGGGC Gene BVV0101_053512 + 0 NULL GK000013.2:593324-789367 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14248 CACTGTGTAATGCGACTGGACGCCACTGTTTGCCTTCTTTTCCTGTCATCATGTGTGTGC Gene GeneID:539763|PARP11:NM_001082452:40_cdna Constitutive 3 NULL GeneID:539763 5 GENE PARP11 MGC152112 poly (ADP-ribose) polymerase family, member 11 EMBV3_32661 CAGAATGTTTGTAGCATTTCCTAATATGTACTGCCATTCTTCCTGTGTTGAGCATTTTTG Gene GeneID:523822|TNFRSF11B:NM_001098056:34_cdna Constitutive 0 NULL GeneID:523822 14 GENE TNFRSF11B NULL tumor necrosis factor receptor superfamily, member 11b EMBV3_10504 TAGGGGAAGGAGTTAGTTCTGCATTAAGCTGTGGGGCTGCTTCTCCCCATTGCTCCCTAA Gene GeneID:514323|DDX17:NM_001101993:64_cdna UTR3_Alt 2 NULL GeneID:514323 5 GENE DDX17 DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 EMBV3_42045 GGAGCAGGATGGGGAAAGGGGGATACCTAACACAAGAAAAACTCAAATGCTGGACTGAGG Gene BVV0101_028678 + 0 NULL GK000008.2:73833365-74118264 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34906 CTTGCTGCTGGAAGGAGAGGCCAGCATCACTGCTAAGACCAGGAACTTAGACCAGTTTTA Gene GeneID:530736|PCBD1:XM_002698908:91_cdna Constitutive 0 NULL GeneID:530736 28 GENE PCBD1 NULL pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha EMBV3_24351 GAATCTCAGTTCCCCGACTAGGGATTGAACCTGCGTCCCCTGTATTGGAAGGTGTATTCT Gene BVT0101_039768 + 0 NULL GK000019.2:43601635-43635372 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100267 1 XLOC_060510 NonCoding TCONS_00100267 XLOC_060510 NonCoding NonCoding - 19:43608062-43609997 - TSS74643 1935 4 TCONS_00100267_6 82 0.605167958656331 1 0 0.000457039161925759 0.000976282653986996 0.000404114383609409 0.000457050005586727 5.35817327134344e-05 4.06693344314797e-05 0.000432229742551049 0.000580772813644872 0.000142715608746369 0 0 0 1.4828331925692e-06 0 0 0 0 0 0.000268677398762916 0.000618798112157772 0.000121585690897211 0 0 0 0.000823540639710364 0.00101767914960687 0.000469842851854196 0 0 0 NM_001001159.1 TLR6 Bos taurus toll-like receptor 6 (TLR6), mRNA. 2e-57 228 75.87 0.171576227390181 0 noncoding 0 0 0 0 -0.412145107633962 0.0484356222156644 -0.0137563496660182 0.772006404992751 GTTGCGGCATGAGGGCTCTTCATCATAGTTGCAGCCTGTGGAATTTAGTTTCCTGACGAGGGATTGAACCCAAGCTCTTGTATTAGGAGCATGGAGTCTTAGCCACTGGACCACCAGAGACATCCAGGGAATTCCAGTCTTTAAGAGCTGCAATTCTTCTCTCCAGACCAAAAAGAATGAAAATCTGATTCCTTCTTTTCCATGATGAAACTTTTTGGACTCTGGCTGTGGCATACCACCTTGAAAAGAATGCCATCTTTTCACCTCTGTCTTTCCCTCCAGTCTCCTTCTTCAACCCCAGCCCATTGGCAACCCTGCCACTGATTCCTACTTGATCTCCCTAGTAATGAATTCAAGGAAGCCTTTGGGCAAGTACAAATAGGCTTAACTAATAGCCCAAGTGGCATGAATTATGTTACCAACCAGGGTTCTTGACCTTCCCCAATCAATACAGATTGACTAGAGGCTGGACAAGAAATGTAGGGAAGGCTACAGTGGGGCCCCTGCTGCAGCACTGGGATGGCAAAAACAAGCAACAGTTTCCCTTCCTTGTTTCCCAAGGAGGGGCGAGCTTGTTCCTTACATAAAGTGAGGGTAGGGGTGCATCCAGGGGTTGGGCTGGCAGGGTGGCTTAGGTGGTTTGCCCACCCCTTTGGTGATATTGAGTGCAGGGGACATGTGCAGTACTCTGCTTTTGATCCTGACAACCTGTTTTTGCTTCCAGCTTCTCAGAATTGGCAGTTGGGATTTTTGGTCTTTTTGTAGCTTTTATTTATTTGTTTTTGGCTGCTTTGGGTCTTCGTGCCATGAGTGGGCTTCTCTCTAGATGTGGTCTGCAGTGGCAGCGCATGGACTTAGTTGCCCTGTGGCATGTGGAATCTCAGTTCCCCGACTAGGGATTGAACCTGCGTCCCCTGTATTGGAAGGTGTATTCTTAACCACTGGATAACCAGGGAAGTCCCTTTCTGTGTCTTTTTATCTTGTTGTTCAGAATTTGCCCCAACCACACAGTCATGCAGCTATTTTTATTCCCTTAAAGTTTCCTTGTATTTTATCACTCAGAGAGACGTTTGTCCAGGTGCAAGCACTGTAGCACTGCAACAAAGGGCCCCAGGTCTCAGCCTGTCTCCATGTCTTTATTTGTTTATATAATTTTGTTTATTTATGGCTGTGCTGGGTCTTCGTTGCTGCTTTGGCTATGAGTGAGCAGGGGCCACTCTCTACTTGCGGTGCACGGGCTTCTCACTGTGGTGGCTTCTCTTGTTGCAGAGCACGGGTTCTGGGGTTCACAGGCTTCAGTAGCTGCAATGCGTGGGCTCAGCAGCGGTGCTTCACAGGCTCCAGAGCACAGTCACAGTAGTTGTGGCACATGGGCCCGCTTGCTCCTCCACATGTGGGATCTTCCCAGACCAGGGATCGAACCTGTTTCTCTGGCATTGGCAGGCAGATTCTTCACCACTGAGCCACCAGGGAAACCCTGTCTCAATGTCATTAGACTACCAATGCCCTCCTTACCAGTCCATCTTGCCCTCCATACAATGACTGCAGTGAAATGACAGAGGCATCATGTCTCCCTCCAGACCACAGAGAAACCACCATGGACACCATGTCAGAGACTCCAAAGGGCTCCTTTGCTCTGGAAGAGCCTCAGGGGGGGCCCTCACTGTTGACAGGCATCAGAGCTGATTCAGGAAAAGCTGATGCAGCAGCTCCAGGCTTTGATTTGCTCTCCAAGTTTTGTCAGTAGGCTCGCTACTCACAGCGGCCGCCAAACTGTTATCTCCAGAACTCTGCCCTTTCTCATTTCCTACCTACAAAGCTCCACACAGCTGCATGATATGCTTCTAAGAAATTCCAAAGGGCAGGTGACCCCAAACATAATAACTGTCAGACCAGTGAGTTAATTTCTCAAGTTGAGGGTTGGCTGAACTCAAC TCONS_00093972 . 3' 6429 TCONS_00093972 . 3' 8363 EMBV3_15597 ATGAGGCCAAGTTCATCGGCTTTACCATGTACACTACCTGCATTATCTGGCTCGCCTTCC Gene GeneID:519904|GRM2:XM_002697026:455_cdna Constitutive 0 NULL GeneID:519904 22 GENE GRM2 NULL glutamate receptor, metabotropic 2 EMBV3_32029 CTAGAGAAGACCAACAGCAGCTTACGCAAACAGAACCTTGACCTCCTTGAACAGCTGCAG Gene GeneID:282704|TBC1D1:NM_001166524:8_cdna UTR3_Alt 2 NULL GeneID:282704 6 GENE TBC1D1 NULL TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 EMBV3_28186 GTCATACAACTGAAGGGCATGGATCACTGGGGAGTCACCCTACAAAGATATGTACAGACG Gene BVT0102_249850 - 1 EMBV3_22243 GK000001.2:46493029-46543486 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03085 AAGACCCTTTCTGCAGGCTAATTGCCCTCGCCCAATAGCACATGGAGTGTCCTTCCTGAT Gene GeneID:506945|BHLHB2:NM_001024929:14_cdna UTR3_Alt 2 NULL GeneID:506945 22 GENE BHLHB2 NULL basic helix-loop-helix domain containing, class B, 2 EMBV3_16481 TCCAGTGGTGAAATACGTGTGTGAGCTTGAGGGGAACAGAGATAAGTGGGCCGAGAAGGA Gene GeneID:511161|LOC511161:XM_002693018:248_cdna Constitutive 0 NULL GeneID:511161 15 GENE LOC511161 NULL similar to nicotinamide N-methyltransferase (predicted) EMBV3_16169 GATAGGCGGCTGTATCCATGCCATTATCCTAACATCCCTCACCTTCCAGCTGTCCTACTG Gene GeneID:100299320|LOC100299320:XM_002699121:182_cdna Constitutive 0 NULL GeneID:100299320 29 GENE LOC100299320 NULL similar to odorant receptor MOR83 EMBV3_09204 TATTACTGTGGTGCCTGAGATCTGTGGTAAGGAGTACACATCTGTCCCACGTCCTGCCCA Gene BVV0102_019046 - 1 EMBV3_12960 GK000009.2:88235143-88242874 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07704 GGAAGGAACCACTCCCAGCGTCCCTTGTTCCACAAACTGGTTTTCCAATTCATCTGTTCC Gene GeneID:618542|SPDYE4:XM_002698156:604_cdna Constitutive 0 NULL GeneID:618542 25 GENE SPDYE4 NULL speedy homolog E4 (Xenopus laevis) EMBV3_27422 GGAGATGGGGGGAACAAAGACCACTGGAAGGAGGCAGACAGGAAAGATGGCAAAAAGGAT Gene GeneID:505850|EIF4B:NM_001035028:160_cdna Constitutive 0 NULL GeneID:505850 5 GENE EIF4B MGC127720 eukaryotic translation initiation factor 4B EMBV3_43185 TGAGCATTTCATCCATGTGGTTCACAGAAGGGAGCCTGGTGGGCAGACTGGGAGTCACTT Gene BVV0102_280923 - 1 EMBV3_16732 GK000016.2:874898-883262 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00066515 1 XLOC_041206 NonCoding TCONS_00066515 XLOC_041206 NonCoding NonCoding LOC100847554 16:871333-878585 = TSS50240 812 1 TCONS_00066515_1 85 4 0.888567094193904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.04211400620068e-07 9.75796063147066e-05 0 0 0 0 0 0 1.12981008384862e-05 0 0 0 0 0 0 0 XR_227969.1 LOC100847554 PREDICTED: Bos taurus uncharacterized LOC100847554 (LOC100847554), 0.0 1243 100.00 0.847290640394089 0 noncoding 0 0 0 0 0.0645756807909949 0.584081655182612 0.0367782780353499 0.518700422063292 ATGAAGGAGAAACTGGAGGAGGTGATGAGGTACCAGAGGGACAAGGAGCTTGAGGTTCAGAACTTTCCTGAGACCTCACAGGACTCCCAAGGCCACTCTTATAACCACTGTGCACTACTGCCCAGGGCGCAGAGTCCTGAGGGCTCCGCGGGGCCGGAAGCCGGGCAACAGCCGCCCGCGGTCTCTGGCCTGGCTCTCATCTTCCGAACGACTCACCGGTCCCGCAAAGGAGCTTTCACCATGGGACCGCATCTCTAATGCTGAAAAGCAGCTGAAAATACCCAGGACCACCTGATTCTCTGACTCAGTGGGACTCAACCCCTGACCTCAGGGGAGTTTCCTGAGCCATGAAGGAAGACTTGAGCTGAGCACAGAAGGAAACATGGGAAAGGATGTTGGTTATTATTTTCCCAGCTATTATCCTGACCTGATTACTCTTGTCATTATGGGCTCTCACTAAAGCTCAGTTGAGGATAACACTAAATGCTACCGAGAATAACTTCAGATTCCTCGGATCCCATGTTCCTGCATTAGGTATTCACACAGATTATGGAAGCAGCAAGGTGGGTCTCCTGGCCCACACTCTCTTATTATAGATACGCAGAGTGTGGCTCAGGGAAGTGACTCCCAGTCTGCCCACCAGGCTCCCTTCTGTGAACCACATGGATGAAATGCTCAGCCTCCCTGGGCTGGGAGCCACGCACAGCTGAGAAACACCTTGGGCCCTGAAGCCAGAGCTGGCCACTACGGTACCTCTTCTTTAGATTCTTCCTCCTGTCCCCATTTCTTGAGTCTGTCTTTCTCCACACGTT EMBV3_22496 GTTCCTCGCATCCCAACCTTCTCTAAGGAGACACAATCACTGAGCACCTATTTTGTGCGG Gene BVV0102_185498 + 0 NULL GK000008.2:64206738-64244602 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227974 TCONS_00227976 TCONS_00227975 1 XLOC_138381 Coding TCONS_00227975 XLOC_138381 Coding Coding ANKS6 8:64242469-64293418 = TSS170081 4728 1 TCONS_00227975_2 864 0.104483925549915 15 0.907493915364686 1.64071071191165e-08 0.000272689155896412 3.75479599928118e-05 6.08055638710338e-05 3.40276333318624e-05 4.26741481003484e-05 1.1739030595522e-05 5.67756282463049e-05 8.71690139847683e-05 1.92415997163537e-05 1.22525511608835e-06 6.85965721560525e-12 2.79014900929185e-06 0.000182706932425616 1.07403556278743e-10 0.00061461417562248 0.000375543244562505 0.000651186277130781 7.21934578667759e-05 0.000133838703940407 7.29335178901353e-07 3.45246088037521e-07 0.000209364717248732 0.000524468677964717 0.000215829370289118 5.5961476074514e-05 0.000160911348963112 0.000137351735805633 3.90041726487303e-05 0.000122854677471156 XM_002689736.2 ANKS6 PREDICTED: Bos taurus ankyrin repeat and sterile alpha motif domain containing 6 (ANKS6), mRNA. 0.0 7892 100.00 0.925338409475465 NM_173551.3 ANKS6 Homo sapiens ankyrin repeat and sterile alpha motif domain containing 6 (ANKS6), mRNA. 0.0 3833 78.08 0.999153976311337 TCONS_00227975_2 sp|Q68DC2|ANKS6_HUMAN ANKS6_HUMAN Ankyrin repeat and SAM domain-containing protein 6; 0.0 1485 91.85 0.997685185185185 7 coding 0 0 1 0 -0.0193093301392343 0.908324604492953 -0.0117760957190256 0.830048128550764 ATGGGTGAGGGCGGGTTGCCCCCGGCCTTCCAGCTGCTGCTGCGCGCCTGTGATCAGGGAGACACGGAGACTGCGCGGCGGCTGCTGGACCCGGGGGCTGCGGAACCCGCGGAGCGCGGCGTGGAGCCCGAGGCGGGCGCGGAGCCGGCGGGGCCCGAGGCGTCCGGGCCCGGGGCGGCGGCCGGAGCGCCGGTGCCCGTGGACTGCTCGGACGAGGCGGGCAACACGGCGCTGCAGTTCGCGGCGGCTGGGGGCCACGAGCCGCTGGTGCGCTTCCTGCTGCGACGCGGCGCCTCGGTCAACAGCCGCAACCACTACGGCTGGAGCGCGCTCATGCAGGCGGCCAGATTTGGGCACGTGAGCGTGGCACATCTTCTTTTGGATCATGGGGCTGATGTCAATGCCCAGAACCGCCTGGGGGCCAGTGTACTCACCGTGGCCTCTCGGGGTGGACACCTGGGTGTGGTAAAGCTGCTCCTGGAAGCTGGTGCCTTCGTGGACCATCACAAACCCTCAGGCGAGGCGGACAGCGGGGACGAGCTGCTGGACATCACGGCCCTGATGGCTGCCATCCAGCATGGACATGAGGCTGTGGTGCGTCTGCTGATGGAGTGGGGCGCAGACCCCAACCATGAGGCCCGGACTGTGGGCTGGAGCCCGTTGATGCTGTCAGCACTCATCGGGAAGCTTGGCATGGCTCAGCAGCTGGTGGAGAAGGGGGCCAACCCCGACCACCTCAGTGTGCTAGAGAAGACTGCCTTCGAGGTGGCACTTGACCGCAAGCACAGGGACCTTGCAGACTACCTGGACCCGCTGACCACCGTCAGGCCCAAGACAGATGAGGAGAAAAGGCGACCTGATATTTTCCACGCGTTAAAAATGGGAAACTTTCAGCTGGTCAAAGAGATTGCTGATGAAGACCCCAACCATGTGAACCTGGTTAACGGGGATGGGGCCACCCCACTGATGCTGGCAGCTGTCATGGGACAGCTGCCTCTGGTGCAGCTGCTGGTGGAGAGGCATGCCGACGTGGACAAGCAGGACAGTGCCCACGGCTGGACAGCCCTCATGCAGGCTACCTACCATGGGAACAAAGAGATTGTCAAATATCTGCTAAACCAAGGAGCTGATGTTACTCTTCGTGCAAAAAATGGGTACACAGCCTTTGACCTAGTGATGCTGCTGAGCGATCCTGACACGGAACTTGTTCGACTGCTGGCATCTGTCTGCATGCAGGTGAATAAAGACAAAGGCCGGCCCAGCCACCCACCACCTCTGCCCCACTCGAAGGTCCGACAGCCCTGGAGTGTCCCGGTGCTGCCTGATGACAAAGGCGGGCTCAAGTCCTGGTGGAATCGAATGTCTAATCGGTTCCGGAAGCTTAAACTGATGCAAACACTGCCGCGTGGGCTGTCCAGCAACCAGCCATTGCCTTTCTGTGATGAGCCAGAGCCAGCACTGGACTCCACAATGAGGGCGGCACCCCTGGACAAGACCAGCCGCTCTGGGCTCCCCGATGTGGCCCCCATGACCAAAGACAATGGTACTGGGAGCACAAGAGGAGAAAAGGAAGATGTGTTATTGACAACCATGCTTCGAAATGGAGCCCCCTTCACCAGACTCCCGAGCGACAAGCTGAAGGCAGTCATCCCCCCTTTCTTGCCCCCTTCCAGCTTTGAGCTGTGGAGCTCGGATCATTCCCGGACATGTCACAACGGGAAGGCAGACCCCATGAAGACTGTGCTGCCTCAGAGAGCCGGCAGAGGCCACCCCGCGGGTGGAGGGAGCACGGACAGTACTCTCGTCAGGCCAGTTAAATTTCCATCTCTCTCCAGAAGCCCAGCCTCCCCCGCCAATTCTGGAAACTTCAACCACTCACCTCATTCCTCTGGTGGCTCCAGTGGGGGAGGAGGCATGAGCAGGCATGGTGGGGAGCTGCATAACCGCTCAGGTGGCAGCGTAGACAGTGTCCTCTCCCAGATCGCTGCCCAGAGGAAAAAAGCAGCTGGATTATCTGAGCAGAAGCCCAGCCATCGGTCAAGTCCTGTTGGGCCAGCGCCCAGCTCCAGCCCGTCTGAACTCCCGGTCTCCCCGGCAGGCGGCAGTGTTCCTGGTGGCAAGAAACTGGAGACAAGCAAAAGGCCTCCATCTGGAACCTCCACTACCTCCAAAAGCACCTCCCCTACCCTTACGCCTTCTCCTTCTCCCAAGGGGCACGCGGCCGAGTCCTCCGTGTCCTCTTCCTCATCCCACCGGCAGTCCAAGGGCAGCGGGGGCTCCAGCAGTGGCACCATCACTGATGAGGATGAACTGACTGGAATCCTTAAGAAATTATCACTTGAGAAATATCAGCCCATTTTTGAGGAGCAAGAGGTGGATATGGAAGCATTCCTCACACTCACCGACGGCGACTTGAAGGAGCTGGGTATTAAGACAGATGGATCCAGGCAGCAGATTTTGGCAGCAATTTCTGAACTGAATGCAGGCAAGGGACGCGAGAGACAGATTTTACAGGAAACCATTCACAATTTCCACTCTTCCTTCGAGAGTAGCGCCAGCAACACCAGGGCCCCTGGAAACAATCCCTGCACGTGACCCTCCTCCTTGTGGTCAGCAGCGTGAGCTTTCTGAATCTCAGTATCCTCTTCACATGGCCGATGCTCCCACCATCATCAGACCTTCCCCATTGCCTGAAACACACTATGCCTTGGCACACCACTGTGCCTTAGTCCCCAAACACCCATTTCCCCCTCCCTGCTGGAGTAGTTGGTGATGCTTGTTGCTGTAACAAAAGTCCGACACGGTAGAGACTTATTCTCCCATGAAGTCCAATGTGGCTGCTTCTGCTTGGCAGAAGCACATGGTGATTCAGGGACCCTGCTCTTTTCATCTGTGGCTCTGCCATTCCTGGGAGCTTCCGAGTCTTTGTTTCTGGCTGGCAGAGGGGAAAGGGATGGTGAAGAAGGCATATAGCCATTTCTTAGCTGTCTTGCTCTTAACTGCTCACATTCCACTGGTTCCTCCATCTTATGTCCCATCGGCCACTCATAGTCATGTGGCCCCACCTGGATGCAGAGGAGACTTGGAAGTGTAGTCGTTGTTCCAGTAGTGGCCTCATAATACAGAACTCTGTACTTAGATGGGGAAACACATATTTTGGGGCAAGATTAGCCACTCTTCCATATTTCCCTTAGACCTTCTAACATATCCCTAATGGTTCCTAATGTCGCCTATCAAATGAAGCCTTTCTCCGCTCCCTTACACAGAACTCACTCCTCCAGCCACTGGGGCCCCTCACTGTTCTGTGTGATGACTCTGCTTTAGCACGTCTCTGCACCTGCTGTAGGCAACACACAACAGCTGTTCAGGATGTGTATGTTGAATGCATTTTTCTTTCTTGCAGAGGCAGCCTTTTATATAGGAAAAAGGGGGAGGCCCAAGGTGTCACCTTGAGGGATCTCTTTTCCTTCCGGACCTTCAGTCTCCTTGTCTGTGGTCAGGCAATACAATGCTCTGATATTCCATGCTGCTCACCCCGTAACACTGTAGGGCTTTTCCACTTTGAGCGGGAGCAGAAGACTCTTATATATTCTATTGTAGAGGGACTTAGGTGCTCACACTTTCTAGGCGAATTTGGAATTTTTCCTCAGGTCACATTCCTCAGGAGGGAGTCAGCTCGTGTAGTTTTCTACTGTGTCATATTCTGGGAAAGGGACTTTGACTTTTAGGTCCAACAGGTTTCTGAAATGTTTTCAAGCATGTAATTCATTCAACCAACACTTGCTGCGTTTCTGCCATGTGCTGGGGGTGCTGAGATGAGTCAGATCCAGTCCCCACCCTTGAGGACCCTGATGGTAAGAGAAGATGTGAATGGATGGTCCTGTCCTGAGGGGGAGCACGGACAAGTGGAGAGAGCGTGTGCTCTGGACTCAGGCTCAGCGTTCTGGTCCAGCCCCGCGGCTAGCCAGCTGTGTGGCCAGGGTCAGGTAACTTGGCTTCTCTGTTGGTGCTTAGAGCCAGCGTGCGTCAAGTACCTGATCTGTGGGACATGCACAGTGGATGGGAGCCTTTGCAGAGTTGTCACCTTTACTGTGATCTCTGCTTGGCTGCACACTGGTCTCCTTAGGAGGTACAGCTTCTCATCTCCCCCTCTCCTGGCCATGAGCGCCCCTTCCCCCTCTGCTGGCTGCTAGAGGCAGTCATGACCGTGCTTCCTGGAGTCTCATTGTGTTCTCCCTCGCGTCCGTCGATCCAGCAGGTGCTATTCCTCCTTCATCCTCCCACCTGTAGAAGCCACCTTCCCACATAACTGGAGAAAGAGGTTTTGTTTTAGACATCACTGACAGACGCCTTAATAAATGTTCCTCGCATCCCAACCTTCTCTAAGGAGACACAATCACTGAGCACCTATTTTGTGCGGCTGCTGGACTCCAGTGTCATCTCTCCTCACCACCAGCCTGGGGGCTGGCATGGTTTAACCTCATCCTGCATGCTGGGGACACAGACACAGAGGAGTGGAGCTGCAGGCCAGTTCCCCAGCCGGGAAGGAGCGGAGCTGGCTGAGACCTGGGTCTAGTGGGCTTCTGAGGCCATGCTTTTGCCGATTCTCATAGACTCCTGGGGCTAGAGGCACCAGGGATTCTCGTGGTTTTAACGTATTCATATCTTCAGAGCCTATCAGTATGTGTAGGGTTGTTTGTCCCTAAAATACACATGGACCCCTGAGTT EMBV3_26390 TGCTTCTACTTCTTTATCTGAGAGATCTGGTGTGCTCCTGGGATCGAGACTTTTCTCCCC Gene GeneID:100300490|ENTPD7:XM_002698486:554_cdna Constitutive 0 NULL GeneID:100300490 26 GENE ENTPD7 NULL ectonucleoside triphosphate diphosphohydrolase 7 EMBV3_26344 GGTAGGGAGACCTGTCAATCCTAGTCTTTTTATCAGCACCTTTGCTTAAATAGGGAGTCC Gene BVV0102_052323 + 0 NULL GK000002.2:19705982-19955154 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101782 1 XLOC_061754 NonCoding TCONS_00101782 XLOC_061754 NonCoding NonCoding - 2:19706089-19707952 - TSS75980 1739 2 TCONS_00101782_2 56 0.179988499137435 2 0.0671321160042965 0 1.73348400581378e-05 0.000202215163027527 5.252773164633e-05 2.27127045987618e-05 1.85126297104405e-05 7.71301278936326e-05 0.0010407725771472 2.7223051228078e-05 1.41960756293376e-05 9.21464464509451e-06 0.000415345644960728 0.000290393060319355 0.000519359709293329 0.000617856547567271 4.55634388794556e-05 0.00108836222926198 0 4.53595366261497e-05 0.000186092214936288 0.000253122457786149 0 0 0 8.76516991645543e-05 0.000153954959422102 0.000107816475254571 3.866369670778e-05 5.58321897991953e-06 0.000181508105437471 XM_005208073.1 ART3 PREDICTED: Bos taurus ADP-ribosyltransferase 3 (ART3), transcript 4e-22 111 83.19 0.0644048303622772 XM_005246381.1 HNRNPA3 PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein A3 (HNRNPA3), transcript variant X2, mRNA. 1e-66 259 72.95 0.274870615296147 0 noncoding GGGAGGGGCGAATTAGGAAGGGGCGTGGCCACCTGGGCGCGAAGAGGGACTAGAAGATTGGATTGGCGGGCAGAGGGTGGAGGCGTGGCAGGCCCCGGGAGCGCGCTCGCCTCGCCAACTTCCAGTGCGGCACCGCCCTTGCCACTGTTCGCGCCCGGGCGGCTACGAGGACGTCAGCTGGGGTTTGGCCAATGGCATGCGCCCACGTCGGGAGAACACCTCGTGACCGCGCGTCACTGGAGAAAAAGAGTTGTAAGAAAGCCCTCCCCGCCCCTCGGCGTCTCCTCGCACGTTTCCAAGTGCCAAGGCCTGGTGTCCATGACTGCCACGCCCACTGTGCGGGCCCGCACTGAAAATCCCTGTCACACGAACACACGTGATTCACGGACATCTTGGAAAGGCTACAAAACGCGGTTGACACCGTGGAATTTCACCCTTAAACAGCAGAAGCAAGCCTGGTGGAGGGTGACTTCGCTGATGGTCTGGTAGTTAGGACTTTGTACTTACACCGCAGGGGGCGGGGGACGGGGTCCATCCCTGGTTGGAGAACTAAGATTCCACCCACATGCCCAGCGGTGAGACCGAAAGATTAAATAAATAAAGTGAAAATGAGGAGGAAAGCTTTAAAAAAAAAAACTATTTTAAAAAAGAGTGTTAAAAAGAAGATGATATATATGTGCCGTCTGTAGCCCGCCAGGCTCCTCTGTCCATGGAATTAATTCTCCTGGCAAGAATACTGGACTGGGTTGCCATTTCCTTTCCAGTTGGTCGAAGTCAGTTAATTAGGTACTCACTCATCTCAAGAAACTTGTTGGCATTATTTTCTTAAACTACTAGTTGCTGTGCAAAGAGCTGAGGCGCCAGATTTAAGTAATGATTTACAAGATTGCTAAAAGTAGGATTAGAAGATACACTCGGAGAATGATTTTTACCTAATTGTTTTCACTTGTGGACTATACAAACAAAATCAGAGAGTCGGTCTAATTCTTTCCTGGCCTACCAAATGACTAACTCATTTGCCCTCACTGAGCTCTAGTTTCAGTTTTGTGGGTTTTTTTTTTTTTTTTTTAAATGAAAATGGGGATAAGATTTAGTGATCGCCAACACCCATGACAGCTATAAATTAATAATCTGTGGACTCCCTATTTAAGCAAAGGTGCTGATAAAATGACTAGGATTGACAGGTCTCCCTACCATACTAAGATATGCTATATATTTTAATGTAGCAATGCATATGAACATCTCCTTTAGAATTGACCATGCTCTTCCTTAGAAAGATTAGAAATCTAATCAGTTATATTCTAAGTTGTTTGAAACGCAGTTTGTTAACCAATGGGGAATGACCAGCTTGGAGTTTGGGGGAAAATGGGGCACAAGTAATAACAATCTGTTGGTGTTTATGTAGCATTGCCCAAGTGGAACAGTGTTTGATTTGGGAGACATGAACTAAATGTACTCTGTTCTGGGGCAGAAACCAGTCACTAGGCCTTAATGTAACTTGGATGAAACAAACTTCCAAACCTCCTCGGGTTGCTCTGATTCTATTATTACAAGCAAATTATTACATATTCTGTTTATTAGGTACTCCTGTTAGCCAACAGTAGTCCTTGAGATAATTGGAAAAGTTTTCTGTCCTTCTCTGATATTTGTGTCAGAAGTTTTCTCTATGTCTTTTATACTTTTTATAAAACTTTATTACATAAAAGCTCTGAGCAATCAAGCTTCGTCACTGGCCCCGG TCONS_00104592 r 5' 32 TCONS_00104592 r 5' 32 EMBV3_41121 AAGCCCTTGAGGGATCGGGTGGCTCCCATAAGCAATAGTCGTAACTGGGTTTTCACCTGA Gene GeneID:539978|GDE1:NM_001034686:4_cdna Constitutive 2 NULL GeneID:539978 25 GENE GDE1 MGC127215 MIR16 glycerophosphodiester phosphodiesterase 1 EMBV3_25439 AGCCACCTCCTCTACGCCATTCAGGGTCAGATGGATGAAGACGTGCAGCGAATTCTGAGT Gene GeneID:530559|ANKRD24:XM_002688934:130_cdna Constitutive 1 NULL GeneID:530559 7 GENE ANKRD24 NULL ankyrin repeat domain 24 EMBV3_02141 GTTCGTAGACCGGTCAGGCCAACGGATTCCGGGAGGACGACATGCTGGATATGGCCCCTC Variant GeneID:505159|FDX1L:NM_001080226:303_cdna 268^419 7 EMBV3_09607 GeneID:505159 7 GENE FDX1L MGC152067 ferredoxin 1-like EMBV3_36784 TCTAGAGGATCCCTTCATGTTATGAGTCCACTTTACTGCCCCCAAGACTGGTCCTGAGTG Gene GeneID:538495|ILDR1:NM_001102214:80_cdna Constitutive 0 NULL GeneID:538495 1 GENE ILDR1 MGC139019 immunoglobulin-like domain containing receptor 1 EMBV3_06990 ATAGGGTTTGCTTCTGAGTGTGTGCTTTGTTTAGGAGAGGTGGGTGGAAGAGGTGGATGG Gene GeneID:280695|MB:NM_173881:2_cdna Constitutive 0 NULL GeneID:280695 5 GENE MB NULL myoglobin EMBV3_24082 CCCAGCTTGAAAGCCCAGCCATATTACTCTATTCCCTCTCAAACTGTTCTAGGAGGTCAT Gene GeneID:525346|NCOA1:XM_002691465:323_cdna UTR3_Alt 3 NULL GeneID:525346 11 GENE NCOA1 NULL nuclear receptor coactivator 1 EMBV3_21275 GAGATCGCCCTGTCCTCCAAGATCCCCGTCACTCGAGTCCTTAAACGTCTCCGTGGCCGC Variant GeneID:526282|MRM1:NM_001101126:259_cdna 769^905 2 EMBV3_32857 GeneID:526282 19 GENE MRM1 NULL mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) EMBV3_00154 CCCTTCTGGGCCGTGTGGCTGTGTCTGCTGGTGATCTGGAGAGCTTCAAGAAGCAGTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05777 TCAGCCCGTGCGTGGAGTCTGGGGGTGTGGATAGAGTATAGCTGTGAAGTCCATGTATAT Gene GeneID:514865|CHKA:XM_002699402:427_cdna UTR3_Alt 2 NULL GeneID:514865 29 GENE CHKA NULL choline kinase alpha EMBV3_29053 TGTTCCTATGTAAACTATGCCTTGTCCTCTGCCATTATAAACAGTTGCCATGGTGTTTCT Gene GeneID:523578|MOSPD1:NM_001038137:14_cdna Constitutive 2 NULL GeneID:523578 X GENE MOSPD1 MGC134397 motile sperm domain containing 1 EMBV3_18047 TTTGAGTGCTGCAGGAACTAAAGCCCTCACCCAGGTGGAGGATGGTAACTACCTTCTGAG Gene BVT0102_252353 + 0 NULL GK000003.2:104159896-104162940 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28534 AAAGCTCCAGTGGCAGAAAGTCCTTTCCAGCCCCAACCTATGGACAGACATGACCCTCAT Gene GeneID:506884|SYTL3:XM_002683708:4_cdna Constitutive 0 NULL GeneID:506884 9 GENE SYTL3 NULL synaptotagmin-like 3 EMBV3_36506 GTGCCCTTCCTAAATACCATGGGGAATACAACAGTTTCTAGAGAAGCACTTTGAGCACTC Gene GeneID:781917|DDX21:NM_001083527:417_cdna Constitutive 0 NULL GeneID:781917 28 GENE DDX21 MGC142775 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 EMBV3_08392 ACGTGTATATAACTGAGGTGTCTGTACGGAATGCCCTTTGCTAGGTCTGTGTTGCTCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08505 GCGTTGCTTCTGGCTGGAAGTCCGTCTGATATCTGGAAACCACACTGGACAATCTCAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11018 AACTTGGCACTAGTAATAGACCCGCTTTGTTCTCTTAACCCCACGGGCTGTTCAACCGCT Gene GeneID:616369|CDKN2A:XM_002689547:25_cdna Constitutive 0 NULL GeneID:616369 8 GENE CDKN2A NULL cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) EMBV3_00783 TGTTGAAGCTACACACAGCTCGGATCACAGATGTTGAACACATCACCGGACTCAGCTTCT Gene GeneID:615535|ENPP1:XM_002690226:6_cdna Constitutive 0 NULL GeneID:615535 9 GENE ENPP1 NULL ectonucleotide pyrophosphatase/phosphodiesterase 1 EMBV3_22527 CTCCAGAATACACCCCTCAGTACTCTGCCTGGGTAAAAAGAAATGTCAGCACTTGGCCAC Gene BVV0101_041399 - 0 NULL GK000012.2:11377833-11441537 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036141 1 XLOC_021094 Coding TCONS_00036141 XLOC_021094 Coding Coding KBTBD7 12:11439206-11444473 o TSS26373 5267 1 TCONS_00036141_2 680 1 0 0.000718243231007918 0.000689859688041812 0.000394508133553199 0.000503447215061516 0.000581328847610364 0.000288057681840959 0.0007106745817726 0.000325495153103718 0.00130531636340402 0.000161314621075048 5.954389909085e-05 5.44128924299079e-05 6.6208546615191e-05 0.000298875278739319 0.000220669133820363 0.000783896970463971 0.000813251172714804 0.000187449401552907 0.000292814964069141 0.000499106362729369 0.000230025888999927 0.000454136022669824 0.000361422371016199 0.000265023423054847 0.000513121254654791 0.000275403218798916 0.000488619257385155 0.00023120294605322 0.000208820247456896 0.000287177208827991 XM_005213688.1 KBTBD7 PREDICTED: Bos taurus kelch repeat and BTB (POZ) domain containing 7 (KBTBD7), mRNA. 0.0 9063 100.00 0.953863679513955 NM_032138.4 KBTBD7 Homo sapiens kelch repeat and BTB (POZ) domain containing 7 (KBTBD7), mRNA. 0.0 3342 84.81 0.569014619327891 TCONS_00036141_2 sp|Q8WVZ9|KBTB7_HUMAN KBTB7_HUMAN Kelch repeat and BTB domain-containing protein 7; 0.0 1321 95.91 0.998529411764706 6 coding 0 0 0 0 0.0859560679406683 0.597542117991603 0.037143276398767 0.500804273566681 AATCAACAAGTATTTATTGAAGCATCCTATGTCCTATGAAATTTAGATCATTCCATTCTCCCAGAATCCAATGAAATGCTATTATCCCCAATTTCCAGACAGGGAAAAGTTCTGACAGAAAAGTTGCACGACTAATGAATATTAAAACGGGACTTCCACTCTAGACTTCAAACCCACAGCTCTAAACCATCAAACCTGGAATAAACGCTTGCTGATTCTGTTAAAACCAGTAGACCCCCAGAAGCCTCGCGATATTACTGGAACTACTGATCCCAACATGCACAGCGGCTCCTGTGAGGCAGCCTAAGCCGCAGAGTCCGCGGGGTCCCGGCATGCCTCGAGGCGCGAAAGGCAACCTGGGAGCCGTAGTTCTCCTGGGCACCTACCGGTATTGCCAGCGCGGCGGTGGCGGATCGCTTGGTTCCAGTTTGTAGGTCCTGTGAGGGCGAGCTGAGGCGGAGAAAGGGCGTGGAACTGGAACCGGGTGAGTCAGGCACTGTCTACGCGATAAAGGGAGGAGGCACCGCGGAGCAGGGCTGACTTAAATCAGCGCGGCAGTCTTTTCAGGGACACAGCGGTCTCGGCGTCAGCGAAAAGAGAGCGAGGAGGCGCCAGAGCCTGGTTCTCGTCCTTCGCTCCCCGCCGCCCTCTCCACCATGCAGTCCCGGGAAGAAGCTCCGCGCTCTCGCCGTCTCGCCAGTCCCCGCGGCGGGAGGCGTCCCAAGAGGATTTCCAAGCCCTCAGTTTCGGCTTTTTTCACGGGCCCGGAGGAGCTGAAGGACACGGGCCATTCTGCAGCCCTGCTGGCCCAGCTCAAGTCCTTTTACGACGCGCGGCTGCTCTGCGATGTGACCATCGAGGTGGTCACCCCCGGCAGCGGGCCCGGCACGGGCCGCCTTTTTTCCTGCAACCGTAACGTGCTGGCGGCCGCGTGTCCCTACTTCAAGAGTATGTTCACCGGCGGCATGTACGAGAGCCATCAGACGAACGTGACCATGCACGACGTGGACGCCGAGTCCTTCGAGGTGCTGGTCGATTACTGCTACACCGGTCGCGTGTCATTAAGTGAGGCCAACGTGCAGCGCCTTTACGCGGCCTCCGACATGCTGCAGCTGGAGTACGTGCGGGAAGCCTGTGCCTCCTTCCTAGCCCGCCGCCTTGACCTGACCAACTGCACGGCCATCCTCAAGTTCGCCGACGCCTTCGACCATCACAAGCTGCGATCACAGGCCCAGTCCTTTATAGCCCACAACTTCAAGCAGCTCAGCCGCATGGGTTCGATTCGGGAAGAGTCCCTGGCAGATCTGACCCTGGCCCAGCTGCTAGCTGTCCTGCGCTTGGACAGTCTAGACATCGAGAGTGAGCGGACTGTGTGTCACGTGGCGGTGCAGTGGTTGGAGGCGGCTCCCAAGGAGCGGGGTCCCAGCGCTGCAGAAGTCTTCAAGTGTGTCCGCTGGACCCACTTCACTGACGAAGATCGGGGCTACCTGGAAGAACTGCTGACCAAGCCCATTGTGAAGAAGTACTGTCTGGACCTTGTTGAAGGGGCCCTGCAGATGCGGTATGGTGACATGTTGAGCAAGTCTCTGGTGCCCAAGCCAGAGAGCAGCAGCAGTAGCTCTGTTGTGTCCATAGCAGAAAATCCACCCCAGAGGCTGGGTATGTGTGCCAAGGAGATGGTGATCTTCTTTGGCCATCCCAGAGATCCCTTTCTGTGCTATGACCCATACTCGGGGGACATTTACACAATGCCATCGCCTTTGACCAGTTTGGCCCACACTAAGACTGTCACCTCTTCAGCTGTCTGTGTCTCTCCAGACCATGACATCTATCTAGCTGCCCAGCCCAGGAAGGATCTCTGGGTGTATAAACCAGCCCAGAATAGTTGGCAGCAACTTGCTGACCGCCTGCTCTGCCGGGAGGGCATGGATGTGGCATATCTCAATGGCTACATCTACATCCTGGGTGGGCGTGACCCCATTACTGGAGTGAAATTAAAGGAAGTGGAGTGCTACAGTGTTCAGAGGAACCAGTGGGCCTTAGTGGCTCCTGTACCACATTCCTTCTATTCCTTTGAACTCATAGTGGTTCAGAACTATCTTTATGCTGTGAACAGTAAGCGCATGCTCTGCTATGATCCTAGCCATAATATGTGGCTGAACTGTGCTTCACTTAAACGGAGTGACTTTCAGGAAGCCTGTGTCTTCAATGATGAGATCTATTGCATCTGTGACATCCCAGTCATGAAGGTGTATAACCCAGCCAGGGGAGAATGGAGGCGTATTAGTAATATTCCCCTGGACTCAGAGACCCACAACTACCAGATTGTCAATCATGGCCAAAAGTTGCTCCTCATCACTTCCACAACCCCTCAATGGAAAAAAAACCGGGTAACTGTGTATGAATATGATACAAGGGAAGACCAGTGGATTAATATAGGGACCATGTTAGGGCTTCTGCAGTTTGACTCTGGCTTTATTTGCCTCTGTGCTCGTGTTTATCCTTCCTGCCTTGAACCTGGTCAGAGTTTCATCACTGAGGAAGATGATGCACGGAGTGAGTCTAGTACTGAATGGGACTTAGATGGGTTCAGTGAACTGGACTCTGAGTCAGGAAGTTCAAGTTCTTTTTCTGATGATGAAGTCTGGGTACAGGTAGCCCCTCAGCGAAATGCACAGGATCAGCAGGGTTCTTTGTAAATATTTTGAAATACTAAGATGTTTCTATTGCTATGAATATATCTTAAAAAGATGTCCTTTCCTTTTCTGGGGAAAAAAGAAAACTTTGATTAGGATTGCATATTTGGTTTAGAAAGGGTAATGTTTGAATTGCTAATGTAATGTTACAAAATGTAAACAGTCCATGAAATAAGCTATATAATAATTTACTGTGCTGAAAGTGGAGATTAAAATATGCAAAAAAAAAATGAACCATGTAATTGATGAGAATGCTTGCTGGTTTTTTTCCGTGTTCAAGAATTTGTTGCACTAGTGAATTGTTTTCATTAATTACATGGTTTATATTTTGATTATCTAATTTAGTCTTCTGTTCATTTTAAAATTCTGTTTAGTGTTGTGGGGGGAAGTTAGCTTTTTCATTTTTGTGTAGAAAATTGGACTAGAAATTGTTGGCAGGTTTCGAAGATTTATATCTTCCCTCTGAATAATGAAAGTAGTAGATTTCCCAAATTCTCACATAGTTTTTAGTATTCTAAGTTTAATATAGTTTGTTAAAATTTGGTTTGGTTTTCTTCTCTTCTGCAAAGAAAAACAATTGGACATATAATTAAGGTTATCAAAGAGTGATTTCATTTTGATAATGGACAGAATGGTCTTAAGCACTCACAAAAAGTAAGGGAAAAAAAATCAGGATTCCCCTGTCTTACAAAAAATTTTCCTTTTTATTTTTGGAATATAAAATGTGTACTTGCTAAATGTGACCATTTTTCTGTCTTAAAAAGCATCCATTCTAGTAGTACCACTATTTAGACCCTTCTAAACCAAAAACAATAGATAACTTGCCGTATTTTTTCATTTATACCTGATACATGTTACACTGAATCAGAGGAGCAGTTGTTTTTTCACTGGACTGTGATTGGGTAATGTAAAGTTTTAATCCATTGGTCATGCCTTGTCTTAAAACGTTTATATGCTTTCCTACAACATTTTGGCTGTATAGTTTTGGTGTTTGTCTTAGAGAATTCTTTGGCAGGAAGTGATTTTTGTGAGGTGATATGGCTTTGAAGATGTGTATAAGCTAAAAACAGTATTTTATTGAGATCAGTAGTAGTTATTGTGTCTATCAACTCTAAAATCAAGTGCCAGAGAGAACTTTAAAATTTTAAGCTGTGTATAAAATTGTTTTATGTAGCATTGAAATTTTCTGTCAGTTTTGTAAGTCACTGTAAATGATTATCAGCTTGAAGTTATTTTTATATTAAAAGTTGACAAATAACATAAGTGGATGATGACATTTGGGGCCAAAAGTGAGAATATGTTTCCTCTAAAATACTTCCCTAAGCAGTGGTGTACCTGGTTATTTTATTTATTTGTTTCTCTCCTATATTTCTCTGTGAACCATGCTCCAGTCTGATTTTTGGTTTTTTTTTTTTTTTTATCACCATAATAAGGGAAGATGTAGAAATAGAGACTTAAGTTGCACAAATTTGATACTGTTAAATACGAGAACATATGGGTACTTACTTTTTGAGGGTCTGTTAATACATACGGTTGTCACAATACATAAACATGATAAATAGTGTATATGTACAAATGCTTGTGGTCTATACATTTTTTTATACTCACTTAGTTTATCTTCTTGAATCGTTGTTCAGCAACATACTAATTCCTCGTCTATACTTATTCTCTAGTGACCAAGTGCTGACATTTCTTTTTACCCAGGCAGAGTACTGAGGAGTGTATTCTGGAGAACAGAATTTTGAAACTAAGCAAAGGGAGGGAGAGAGAAAATGGTTTAAAAAAGCCAAACACACAAATAATGTTTTCTTAGCCATTTCGATGGGCCACTGGAAGAATCTGCAGGAGGTTCCTGTCTAATATTATTTAGTGAAATAAGATTCTTACTCCAGCAGCGTATGTTCCTTCAAAACAGCAAACAGTGCTAGTTTTTGTTCCATAGAGGGACGTCAACAAGCACTGCTCCTAACGTGGAAAGCTCTATCTTAATTGTATTTTTTGGCCCACTTTTCTTCACCAGTAACTTCTTGTTGATAGTTTTTTGTTCTCTAAGATTGAAATAGAAACAAGCTGTTCACAACCACGTTATCCATCTACAGAATTAAGCTGTGCAACCAGTTGATAAGAGACATTCTCTCATGTGTCATTCTCATCCTCTGAGTTAGGTATAAGCTAATTAGTAGTAAAATATTGGTTTACAAAGAGCTTTTCTTAGAAAGGATTTTGGTTTCTTAATATGTTTGTGAATTAAGGATAGATGTTAACTTTTTTTTTTTTTTAATAGAAAGTGATTTGTACATGGTTAGTTACAAATAAAACTGGCACTAGAACCCCAGGCCTTCTGACCTCTTGATTGAGTTTGTGCTAAATGTACAAAACCCTTGCTTACATAGTGACACAAGCAGCAGAGCAGTGTTGAAATCCCTTCATCACAGGAAAGCTCCTTTGTCTCAGTTTCACAATTAATCGACACAGATTTTAGCAAATGCTTAATATAATGTCATTTGCAGGATTACTGTGTGTAAAACTTAAGAATGATCTTACTTATTTTTTGTATCTATCTGCCTGTAG TCONS_00036142 s 5' 0 TCONS_00036142 s 5' 0 EMBV3_37099 AGAAGAAACAAGCAAAGAAGCCAAAATCAGAGTCTCCCCAGAAGAAGCAATAAAATGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11454 CCCGCTGTTCCGCAGCCTCACTATCAAGAGGGAAGATCCGCCTGCACATTCTCAGCCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10484 TTCCTTCTGGCTCTAAGGTGCTCTGTGTCTGTCTCTTTGTCTCTGTGTGTATTTGGGGCC Gene BVT0102_181645 + 0 NULL GK000015.2:45024905-45033762 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059253 1 XLOC_036290 Coding TCONS_00059253 XLOC_036290 Coding Coding RIC3 15:44962851-45033518 j TSS44470 6022 1 TCONS_00059253_3 354 9 0.914909574618628 0.00756461341023177 0.00426877802115243 0.00484569727283761 0.0041111876110311 0.00489553498737887 0.00226962130108264 0.00326865989721812 0.00489700761269769 0.00601871831785111 0.00125721851774767 0.00102926422566392 0.000198346751137251 0.000872537230443159 0.00170862195000786 0.00152120747314146 0.0009498581573386 0.00109083575838079 0.000140713713257311 0.00471313221590553 0.00368634212947806 0.00162390048773097 0.000169668277423473 3.58004316728813e-05 0.000134000515945807 0.00588642388793505 0.00380585888887397 0.00409432672202515 0.000226703342400459 0.000174838251948895 0.000327137247426656 XM_005215946.1 RIC3 PREDICTED: Bos taurus resistance to inhibitors of cholinesterase 3 homolog (C. elegans) (RIC3), transcript variant X1, mRNA. 0.0 2004 99.73 0.185320491531053 NM_024557.4 RIC3 Homo sapiens RIC3 acetylcholine receptor chaperone (RIC3), 0.0 1339 85.33 0.18365991364995 TCONS_00059253_3 sp|Q7Z5B4|RIC3_HUMAN RIC3_HUMAN Protein RIC-3; 0.0 559 82.66 0.997175141242938 1 coding 0 0 0 0 0.0489957721267061 0.714896222167376 0.00426085291350332 0.935421211846922 GCGGGGGCGGGCGGTCATGGCGTACTCCACGGTGCAGAGGGTGGCCCTGGCCTCGGGACTCGTCCTGGCTGTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGAAAGCGGCAGGAGCCGCCGCCGGCGCCCGAAGGGAAGTTGGGTCGATTTCCACCTATGATGCATCAGCAGCAGGCACCCTCAGATGGCCAGACCCCTGGGGCTCGTTTCCAGAGGTCTCACCTCGCAGAAGCCTTTGCAAAGTCCAAGGGATCAGGTGGAGGCGCTGGAGCAGGAAGTGGTGGAAGAGGCCTGATGGGGCAAATTATTCCCATCTATGGTTTTGGAATTTTTTTATATATACTGTACATTCTGTTTAAGCTCTCAAGGGGGAAAAGTACTGCAGAGGATCGGAAGTGCTCTACTGCCACACCTGGAAACACCCACAGGAAAATTACCAATTTTGAGCTTGTTCAACTGCAAGAAAAACTGAAGGAAACAGAGGAAGCCATGGAAAAATTAATCAACAGAGTGGGGCCTAATGGTGAGAGAGCACAGACTGTGACTTCTGACCAAGAAAAACGATTGCTGCATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGATAGATCCACTCCAGAGAAAGAAGCTGAGGAGGCCCCTTATATGGAAGACTGGGAAGATTGCATCAAGCATAGGCAAGAAACAATCCTGGTGGATTACCCTGACTCAAAAGAGCCCTCTGCTGAAGAAATAGCTGAAAGAATGGGAATGCTAGAAGAGGAAGAATCAGACCGTGTGGGTTGGGCAATGCCTACTGAGCCCAGAGCTCAGGAAGATAATTCTGTTACCTCATGTGACCCAGAGCCAGAACCATGTTCCTGCTGGTCTCCTGAAGAAGAGGATCCCGCCGTCTTGGCAGAGAATGCTGGATTTGGTGCCAACAGTTACAGTGAGCAGGAGGAAACCACCAATGAAGTGTGGCCCTACGACTTGAGAGGTGAAGGGTCAGGCATCAGTGCAGATAAAGCGGATCCAGGTGGCATGCTGAGGAAGCGGCATCCTCAGGGTTTAGAGTGAGAACGGTCAGTCCAGGACCATTACTGTTGTCCCAAGTAGTGTCCTGCATATGCTATTTCCCAGAGGCAAGCCATGGAGAGAGGCCACAGTCCAGCTCCACAGCCCTGCGTGTGTTCCTCTGGGCCAGGCCCACAGGGTTTACTCGGAAGCAGCAGCCTGCTCTTCCAGCTGGCACAGCTGAGCCTGCAAAGGATTCGCTAACTTAGTACTTCCTGTCCTTGCCCTTCCCAGCCTGTGTGTGTGGGTTCTGACCATCTTTAAACTTGAGGAGCACAGCCAGAAGGAAGACAGTTTCCTCCCACAGGTGACTGTTTCCAAACCACCTATGATCCCCTTGTTACCACCACCCTCCTGCCCTCCCCTGAGGCTCTTAGGGCAGAAGGAATGAATGATGTAGAAAAAAACTTCTAGGTAAAGAAACATGTTTTCTCTTTTATAGGGGGAAAAAAAGTGCACAGCAGTGTTGAAACAGTTCAAGTTTAATTTGTTGATATATGGTTTGTACTTAGACAAACATTAAAGTTCTACAACGTACATAATGTCAACATGGGAAAATACCACCTTTGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGAGTTTATTCAAAAAATCACTTAATAAAAGCAGTTTTGCAAGTTTGTCTAAAACTCGATAATTTTGAACAAAAATAAAATGTCTAACCACTCCAAAATAGGAAAAGACAATCTTGTGCAAACAGACATACACATTCTAGGCATTATGCAAACTGGCTAAATGTACGCTCTCAACAAGAGAAGTGTCAGCATTCTAAGTCCCCTTTGTCACCAAATGCAGGACTAGGGAGGCCAGAGTTGGGCTTCCCTTTCTATGTCACTCTGTTACTCTCTAGGAAACTCTGGATCTCAGCCTAATCTCCAGCTCTGCCTGGATCTTGAGAGGGAAGCAGGGAGGAACGAGAGAACAGAGGAGGAAAGAGGTGTGACATCTTTCTCGGGAAAGAAAAAAGGCACAGTGATGAGCCAGAAAGTGATGGAGCAAGGACCAACCTTCATTCAGCCGGAATCCTACCGCAAGCTGTGACAGTCTAACCTTCTCATTCTGTGAGAAAACGGATCTAGAAAAACCCCACGGTTTACTCAAAATCACTTGATTACTAAGTGCTGTAGTGCTTCCTGTAAGAACCAACTTGCTTCTCAACCTGGTTGGAAAATTCAAAAACCAAACCTGTCCTAAAACTTCTGTTGGACTTTTCCCCCCATATCCTGAGATGAAAGAAAACTGCAGAACTAGAGGCATGGAAGGACAGATGACCAATAAACTCAAAAACAAGAGCCCATAGTTTGGCCTGTTGTGGGGCTGCTCCAGTTCTCCAGGCCAGGGCCCAGGGCAGTGTAGGGTCGCGGCGCTGGGCCCTGAGTGCCAGGGAGTCAGGCCCCCCTTAGCGCTGGGCGTCAGAGCAAGCGGCCTCCTTCAGCTCTCTGGAAACGTGTGCTCTGAGCGCCCCCTGGCATCCTGAGGTGACAGAGCTATCTCAGCTGGGGTAAGGAACGGTAGAGAAGGGAGGGCCAGGGTTCCCACAGGAAGGGAAAGCCAGGGACCCCACCCTGGAGATGGAATTTGTGCTTGCGTTAACAGAGCTGTGGACACGGCCAGCCCACCCACCCCCCTCACCTACTGTAAGGAAAGCACGGGCATCTTAGTTTGAAATCATCACTGGCTTGTTAAGTTCAGAACTACCTCTGAATATATGGTAAATTCATTTAGAGGTAAATGCCCCACTATTTCCAGAGGGGAAAAAAAAAGACATCTGCTTCTACAGTTTTGTTCCTTTTTGTCACTGCAGGAGGCGGGCCCCAAAGGTTCTCTTCTAGCCTGTGATGATAACACTCCTTGGCTTCTAACACCTGTCCTCAGCATGGGTCTGAACCTCACATGCTTGTTCTGAATTAGTGTCATGATTTTTAAGGCACATTCAACTAGAATAAGTTCAAATTCATCCAAAGCACGCATGCAACACACCAATTTCTCCAGCTAATGCAGAGTGGAAACTGAAGAACTAAACTTTTCTGGATAGCGTCTTCCCAATAAGAACCTCCGGAGAAGGGGTTGGTACTTTCCCAGGTACGCTTTCTGATCAAAGGGCATGAAATGAAGGAACAAAATCCACAGGTGATCACAGCTACATCCTCATTCCTTTCCTATTCATCCACAGAAATATGATAATAGGAAACCTTGATTGTTCACCGATTGCCCTTGGCCCCAAATACACACAGAGACAAAGAGACAGACACAGAGCACCTTAGAGCCAGAAGGAAAGAAAAGCCAGGACTGGAGAAGAGTTAGGGATGTGAACCTTACTGCTCTGCAGGACTGTGTAGGGGCAGAGATGGGGTGTAGCCCCAGGAGGAGCTGGCAGCAGGAGCAGTTACAGAGGAGCTGCCTAAGGCCCCAGCTACCCAACTCCCGTGGGGCATGCTTGCTCCATCACTAAGTTCCCTGCCCAACCAAGGACCATCTGGGCAGTGGGTATGAAGGACAGGGACTCTTAACCGTGTGAGAGACTGAGCCCAGGTGGTCTCCAGGGGTTCCAGCAGCTTTAGGAGTCTGGGCCCATGGTTAAACCAGCATCACCCAGAATGGGGTCTTAAAAAAGACCTTGTGAGGCTGGGTCTCCAGCAGGTGATGAGTGCTCTTGCCTGTCACTCAGTACCTAACAGCGTTTTGTCGTTGAGCTACCCTTTGCCACACCCAGGCTGGAACTCTGAGGCCACACTCCCAACCCTAACGAAACACCCGTCAACCCATCCTCTGTGTACTGGAGGAGTAAGCAGGCGACACGTTTTCCATCGTATGTCTAATGAATTCTCCACTCTGCCACCAGGATCCTCCATCTCACAAAGATCCAGAATCAACCTTTCTACCTTAAAATCACTGACCCAGAGAAACAGCTTGACTAGACATTAGGGGTCATCTCGCTTCTGTCATTCCAAATGTCAGCAGGTCTCCAAAGTCAAGACAGGAAGAGCCAAGCTGGGACTATGGAAAGGAGGGGAGCACAAAAGTATTTCCCTGGGAAGCGGGCCTGCTCCAGGACAGAAAGTTCCAGTGCCCTCAAGAAGGTCCCAAGTCAGAGTGGTCTAGGTACCAGACCATGTTAACAACCAGAGATGGATGCCCCAGGTGTGGCCAGGTCCCTGCTAGGGCAGGAGGCCTCGCTTTAAGCACTCAACGCATGAAAACCTAGATTCCTAGGAAATGAGAACTTCCTAGTTCCACTGAAGTCAAAACAGCTCCACCACCTCACTCAGGGCCTTCCTAACATGTTTGAAGTATGACTCCTAAAAAACCCAACTTCCGTGTAGTCTTTCCAAGCACATCCATCTACTCTGAAGTGAGGAACGACTCTCGCTTGCTTTCCATTGATTTCTGATCTCCATCTGGGCCGGCAGCCTCCGTCAGGATGAATGACACATAGCCAAGTGTTCCCAAGTCTGCAGCGTAGATGGTGCCGTCCAAGGAGGAGGGTGGCAGAGGGAGAGGTCAGGCCACTCACAACTACCTGTCACACCTGGATATAAAACTGGGCTGCAGCCTTGCTGAGGCCTGCCCTCGGGGAGGCGGGGGGGGGGTGGGGGGGGTCACACCTGGATATAAAACTGGGCTGCAGCCTTGCTGAAGCCTGCGCTCAGGGAGGCGGGGGGGGGGGGGGGGGCAGACACAGGCCAGTCCTGATCAGACGGATGTGCAAAATCAGACAGCTTTCAGCAGGGAACTGCCTGGTTTCCCACTGAAATGGCCTCAATCTCACCACCTCTTGACATTTCTAAGTCTGGAATCAGGTGCATGGGCATGCATATTGTGCCCCAGGAAGGCCAGAGACAGCAGTTTTTTGGGAGGAGAGTGGGAACAAGGAAATGAAAGGAGCTCTTATACAAATTCTGCCCTTAATCAGCCAGGTGACTCCAGGCAAGTCCATCTTCTAGGTGATCTAAGGGTTGGTCCTGCCACCTCTGATCCCTTGTGGTTCTAACATGTCTCCTGCTCTCCTCACCCTTTCCCATTCCCAGCTCACAACTACACACACGCCCTCAGTGGCCACAGCCTAGGCTTTACTGTAGGGAGCTGAAGCACAGGCAGGAGCCCCAGGCACACCTACCTGTGTGCAGTCTGGGGCTGGCATCTTGGGGTTCCCTGGGTCAGCCGACAGGGCTCCTGGACAGCCCTGGCCCACGTGCCACCTGTATGCTCAGTCTGTATGGATCCTACAGACCCTACCTGCTAAGACGTTTGGCCTTGGGGGCCGGCCTCCTGCCGCCTCTGTGCGCACAAAGAAATCCTAAAGAAATCAAATGAGCCCCAACTGCAGGCCGCCAGCCAATTCTCACAGCCACAGCCAGGCCCTGCAACCCTGACAGGGGCCTGCCCCTCACCTTTCCACCCCAATTCCTCCCAGGCCTGGCGGAGGCCAGCTGACGCTTGAGGACTTTCTGCAGTTGTAAGAGCCAGGCTCAGCTACCCAAGCCTGTGCTATGTAAAGCTGTTGTGCCCCAACACTCACACACGCTCTCACACACTCACACAGCCACAGCCAGGCCCTGCAACCCTGACAGGGGCCTGCCCCTCACCTTTCCACCCCAATTCCTCCCAGGCCTGGCGGAGGCCAGCTGACGCTTGAGGACTTTCTGCAGTTGTAAGAGCCAGGCTCAGCTACCCAAGCCTGTGCTATGTAAAGCTGTTGTGCCCCAACACTCACACACGCTCTCACACACTCACACATACACACACTCTCACCGAGCCCCTCACTGCTGGGGCCCGTGGTCATCGGACCCCGGGCTGAGTGGACGCTGGGCCGCAGCAGCCCTGCCTTGTGCTTCCTCTCCCTCTCCACCTCTTCACGCCTCCCCTGCTGAAGGGGCTGCTCCGCTTGGCAAACAGGACTGCAG EMBV3_06922 CTCCCTGTGGGGTAGGAGGGGACAAGGTTATACCGTTCCATTAATAGTTACAACAAGGGG Gene BVV0102_234015 - 1 EMBV3_16765 GK000020.2:25700516-25965174 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28739 ACTGCTGCTGTCGTATGAGAACTGTGAAGAGGCGATGATCAGGGTGGGGACAGGATCTAA Gene GeneID:506550|TSPAN1:NM_001034270:80_cdna Constitutive 0 NULL GeneID:506550 3 GENE TSPAN1 MGC127265 tetraspanin 1 EMBV3_28638 TCGTCCGTCACGTTCTTGGGGCACAGGAACTGGGGTCATGCTCTGCTTCAGAATCTTGGG Gene GeneID:100138911|LOC100138911:XM_002686364:138_cdna Constitutive 0 NULL GeneID:100138911 3 GENE LOC100138911 NULL hypothetical protein LOC100138911 EMBV3_16575 TGTTACCTCAGTGATTGGATGAGTAGCAAATAATCATGTTGGTTTTAATGGTGTTGATTT Gene GeneID:281564|UGDH:NM_174211:5_cdna Constitutive 2 NULL GeneID:281564 6 GENE UGDH NULL UDP-glucose dehydrogenase EMBV3_26848 GTCAAACAGGCCATGTTCAACTATTTCCAGGCGCTCAGCAGGGAGACCCCCTTTCCCGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14458 GCAGAAGGAGCTGTAGCTTCTTGTAGCATACTTCTTAAGTTACAACAGTATTTGGCAGCG Gene BVV0102_066632 + 0 NULL GK000001.2:112803569-112941086 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010244 1 XLOC_005796 NonCoding TCONS_00010244 XLOC_005796 NonCoding NonCoding - 1:112817609-112818718 - TSS7321 1109 1 TCONS_00010244_3 64 1 0 0.000613422815334482 0.000724863958307132 0.000851134951118919 0.000366910870217611 0.000365057418392026 0.000345126181838995 0.000357580374457273 0.000234668721402976 0.00103162222757172 0.00024115642869091 2.0641892652435e-06 4.0303016146047e-06 9.57290994787452e-05 8.4833076055566e-06 9.29039682192394e-05 0 0 0 0.000944054988998006 0.00140716102738025 0.000156029094368262 0 0 0 0.000637245574194981 0.000368472964003516 0.00095098977260826 2.59833321752276e-05 0 0 0 noncoding GTGTAGAGACGGGCGTGTACAAACTAGAAGCACCTGTGTCCTCTTTTGGCTTGTTTATGAGAACTGAAGGCGATCCGAAGTGGACCAACGTAAAATGGCAATGAAAAGAAACAAAGGCTTTCCCAGAAGTGATTGTTTTTCCAGTTGCTCAGGCGTTTTGATCACTTCTGGGGTTAATCATCTGCAGGGAATGTTTCAAGAAACTTAGACACGAACCAGTCAGATCCCTCAAGCTTTCTGTTGAGAGAGTCACTTTTTCTTAAAATTGAGTCTTGACAACTCCATTGCCCTTTAAGAGTTTCACTTGTTTACGCATAGGTTAGCATTTGGCAAGGGTACACATCTTAAGGGTTATGCAGAAGGAGCTGTAGCTTCTTGTAGTACACTTCTTAAGTTACAACAGTATTTGGCAGCGTGATTGGTATACTTACTTGCTATTAAATAAACATTGGTAAGAATTAACTGCTAATAAATGTATGAAAATGGAATTACTCTTTCTGGGATAAAGTGCAGCATAAAAAATACCGTAAGTGTAGTAATACATGAGCACTGTCTTGCTATATCCTATTTTTAAGTAATTTGCCTTCAAGAATAGCAAATGTTTATTAGTAGTAGTATTCAGACAATATCCTTCCACCATCAGCAAATGAAGTCAACGGTAATATGACTTTTCAGATGATTAACAAATAACATGCTGTTAAAGTTCTCTTTCCCATCCCATTCATTATGAATGCCGAGACATTATGCAATCCATCTGGCTCAAACGTTTAGAAGTGTCCAATTAAGTTTTTTATCATTAAAAATATAAAAACTCTTAATTTTCAGGTTCAGATACTTTGTGACCCTATTTTGTGGCTTGTAACTGGCTCCAATTCCCTAATTCTCAGTGACATGTGTTTCTGCTGGTTCCAGGAGGTAAACTGCAGTTTAGCAGATCATGGGATAATGAGACTGGGAGTGCTTGGGGGAAGGCTGGGGAGAAGCCATGGGATGAGACAAAGGGAGGGAAGGTTGATGGGCAGAGCCAGGATTTATAGCTGCACCAGATTATTCATAAAAGCTGTTACAGTCATTGCTTCTGTTTGATACATTTCCCCACATCACCAACA TCONS_00001848 TCONS_00001849 TCONS_00001851 TCONS_00001854 TCONS_00001856 TCONS_00001857 TCONS_00001858 TCONS_00001859 TCONS_00001861 . 3' 765 TCONS_00001848 TCONS_00001849 TCONS_00001851 TCONS_00001854 TCONS_00001856 TCONS_00001857 TCONS_00001858 TCONS_00001859 TCONS_00001861 . 3' 1873 EMBV3_21263 GACCAGATTTGGTTTACAAAACTAACAGGAGAAGCTTATAAACATGTTGTGCAACACCTC Gene BVV0102_025640 + 0 NULL GK000024.2:1-215554 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034472 1 XLOC_020687 NonCoding TCONS_00034472 XLOC_020687 NonCoding NonCoding - 12:6364895-6366558 - TSS25460 1663 1 TCONS_00034472_1 48 0.506915213469633 1 0 8.34717351197335e-10 7.55294998933707e-07 0 0 1.3430468344736e-06 0 0 0 0 0.000411407190845502 0.000767496433422496 0.00016884960262657 0.000210214201268645 0.000191650917828039 0.00126996477062549 0.0135641318459335 0.00252741940803008 0.00766436854674063 0 3.60363795826903e-07 0 0.00424968258548582 0.00400432867505553 0.0054478244682385 0 0 0 0.000974975121570472 0.000467746776754344 0.0027204390629365 XM_005226839.1 MS4A8B PREDICTED: Bos taurus membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), transcript variant X4, mRNA. 8e-68 262 85.84 0.137702946482261 XM_005258880.1 ZNF773 PREDICTED: Homo sapiens zinc finger protein 773 (ZNF773), 1e-09 69.8 87.50 0.0330727600721588 0 noncoding 0 0 0 0 -0.0644343619631274 0.597147675601465 -0.0141406486926897 0.771811902889454 GAGGGAGGAGGAAAGAAAAAGTTAGAGAGAGGGTAAAGGAAAAGAAACGAAAGAAAGAGAAGGTAGTAAGAAGGAAGAAGGGAGAATGAAAGAGGGAAACAAAAAGGAAATGATAGAAAGTAAAAGAAAAGAGAAAAGGAAGGAAAAAAGAAGAGTGAGGGAAAGAAAACTTGAGAAAGATTTAAAGAGAAGAAGTAAGAAAAAATCAGCAGAGGAGAGAGGAGAGGACTAACAGGACACTGTGGCCAGACACCCTGGCGAGCTACCTCCCCCTCTGCGCAAACTTTTAAAAAAACTTATCCACCACTTTCTGATTTGGGGCGATAGCCGCCGCCTCCGTTTGCGCCTTCCAGGGCCCAAGAGTTCCCCACTTTGCCCCCAAAGCCTCTCAAAATGTTGCCTAAGCCTGAAAAAGATAAAAAGTTTTTTAAATAGTGGAGCTTTTAAAACAGACTGCATGCACAATATGCAGAGCGTGCTCCTTGGAGAAAATCCCCTCAGGGGGGTCTCACCCAGGCTAAGAGAAAAACCAAACGGTAAGGGGATTTAGCAACAATATTAACCCTTGACGAGGTTACTCCAATTCCAACGGGAGTGGCTGGCCCCCTACCTGAGGGCATTGTAGGACTTGTGCTAGGGCGTAGCTCGCTTTCTTAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAAAAAAAAAGAAAAAGAAAATTTCGGTGGTGCATGGTGTAGTAGATTCTGATTATATTGAGAAATTAAAGTTTTGTTCTCACCGCCTACTAAAACTGTGCAAATTAATAAAGGTCAAAGAGTAACACAGCTTTTGCTTTTTACCTTATTATCAGACAAGAAAAAACCTTGACTTCTCAGGCTAGGAGCCACAGAACATTTGGATTTAGTGATCTAGCCTTTTGGGTGCAGGAAATTACAGCTCCAAGGCCTTTAAAAGATCTTTTAATTCAAGAAAATAAAATGTCAGGGCTATTAGACACAAGAACAGACGTCTCTTAACATTGCTGGAAAAGACTGGCCCAGTTCCTGGCCCACACATACTACTAAAAATGAGTTGGTGGGATTAGAGAAAGTGATATGCGGGGTGAGAATGCTGTAGAAAAAAAAAAAAAAAAAAGGGTGAGGGAGAGTTTAAAACCTTGAAGAGTAGTGAGTTTCCTGTTGTTGGAAGTATTCAAGCAAAGATTAGATGGTTACTTGTCATCTAAAAAGCTATAGACCAGATTTGGTTTACAAAACTAACTGGAGAAGCTTATAAACATGTTGTGCAACACCTCTTTACTTGCTTCTCATATTTAGGTGTGCCAAAAGTTTTAAAAACTGATAATGCCCCTTTGAAGCTGTGGAGAGATTGTTTACTAACTTTAAATGATTTCCAAAAATTATTAGGGGACATTAATTGGATACGCCCTCATTTAAAACTGACTACTGCAGATTTAAAGCCTTTATTTGATTGCTTAAAAATTGATCCTAATTCCAGTTCTAAGAGAAAGTTGACTAATGAGACAGAGTTAGCTCTTGTTGAAGTGTATGAGACTTTAAATGGTCAGTTAATTAGGATTAATATTACCAAAAGATGAGATTAAATTATTCTTGCCACAAAACATACACCTACCGGGTGCTTATGACAAAAAGGCCCATTGGT TCONS_00036102 r 5' 1163746 TCONS_00036102 r 5' 1163746 EMBV3_25636 CCGAGGACGCTGGCAGTGATGGGTCTCCGGGCAAGTCCCCATCCAAAAAAAAGAAGAAAT Gene GeneID:507193|ADD1:XM_002688431:52_cdna Constitutive 0 NULL GeneID:507193 6 GENE ADD1 NULL adducin 1 (alpha) EMBV3_26272 AAAGAGACTGCACAACACGATAGCGCTGGCGGCCCTGGTGTACTGTGTCAAGAAGATCTA Gene GeneID:508598|TMEM11:NM_001097998:493_cdna Constitutive 2 NULL GeneID:508598 19 GENE TMEM11 NULL transmembrane protein 11 EMBV3_13301 TTACTGAGACCTGCACAGTGGCTTGAGACCCCGTAATTCTCTACCATCTGACTTTCCCTC Gene GeneID:538384|PRDM1:XM_002690135:8_cdna UTR3_Alt 2 NULL GeneID:538384 9 GENE PRDM1 NULL PR domain containing 1, with ZNF domain EMBV3_11782 ACATCATCATTGCCAACAACCTCCGGGGCTGCGGCTTGTACTGACCTCTTGTCCTGTATA Gene GeneID:281792|GNAO1:NM_174325:42_cdna Constitutive 0 NULL GeneID:281792 18 GENE GNAO1 NULL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O EMBV3_10829 CCTTGATGCAGTCTCCAAAACTCAGTCCCCTCCTGTCCTTTTTGGCTCCTAAGAAGAAGC Gene BVV0102_029915 - 1 EMBV3_43452 GK000005.2:32106572-32118514 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38587 TTCGTTGGCCTCTGCTGCTGAAGGAGAACCAAGTCCACGCCGAGCTGCCTGTAGAGAAGC Gene GeneID:282191|COL4A1:NM_001166511:36_cdna Constitutive 0 NULL GeneID:282191 12 GENE COL4A1 NULL collagen, type IV, alpha 1 EMBV3_18119 AATATGGACTTCAGAGAACCCACAGAAGAGGAACGAGCACAGAGACCACGGCTCCAGCTT Gene GeneID:517409|EIF4H:NM_001075752:197_cdna Constitutive 1 NULL GeneID:517409 25 GENE EIF4H WBSCR1 eukaryotic translation initiation factor 4H EMBV3_21803 CTGGTAACCTGTGCATGGTGACTGGAGGTGCTAACCTGGGAAGAATTGGTGTGATTTCAA Gene GeneID:781580|LOC781580:XM_002707871:43_cdna Constitutive 0 NULL GeneID:781580 X GENE LOC781580 NULL similar to ribosomal protein S4, X-linked X EMBV3_02262 CCATGTGGAGTGAAAAGGAAGGGACAAAGGGAAACTCGTGCAGAAACAGAAACAAGCAGG Gene BVT0102_073841 + 0 NULL GK000004.2:115183734-115246101 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182947 TCONS_00182951 TCONS_00182952 TCONS_00182948 TCONS_00182950 1 XLOC_111035 Coding TCONS_00182947 XLOC_111035 NonCoding Coding LOC100138276 4:115216944-115224214 j TSS136640 906 1 TCONS_00182947_1 71 0.337748344370861 2 0.875636263585087 0.00043765827104605 7.06324928585008e-08 0.000508489369909152 0.000302927425106787 3.32745482338218e-08 6.68500668182901e-16 8.33635211929069e-22 7.10676130077127e-05 7.36598032872457e-27 0 3.05662193765578e-46 0 0.000283844201408004 3.5948914468614e-10 2.7417010287522e-08 0 0 0 0.000825656722973421 0.00137937448395078 0.000140659560821165 0 0 0 0.000708105502603315 5.22324481889778e-08 0.00071418994161644 0 0 0 0 noncoding 0 0 0 0 -0.072164896489207 0.578025410529158 0.0399178217331832 0.517083618775024 GCGCAAAGACTCTCTCTCTTGGCCTTGAGAAGGCACACAGCCACGTGGTGGAGAGGGCCTGGAGCTGTGACCAGCGGGCGGCCTCTAGCCGCCAGAGGTCTTAGTTTTACAACCACAAGGAATTGAATCCTCCCAGCAACCAGTGGGGTTAGAGAAGGACCCTGAGCCTCAGAGAAGACCGCAGCACCAGCCCACACCTCGATTCCAGCCTCCTGAGACCCTCACCCGGGACCAGCTGACCCGTGCTTGGGACCCTGACCCTCAGAAACTGCAAGAAAACCGGTTCGTTCTAAGCTGCTCAGTGTGTGGAGAAGGCCTGGAATGCAGCAAAGAGAAGAGAGTAACCATGTGGAGTGAAAAGGAAGGGACAAAGGGAAACTCGTGCAGAAACAGAAACAAGCAGGACATGGTCATGAAAGAGGAATGTGTCAAGACTGTATCAAAAATGTGGGTGTGGACAGCTGAAGCTGCACTGCAGGGTACGGGACTCCTGGGGTCCTATTTACTGCCCCGGCCTTCTCCACCACTACAAAAGAAAGGCCCCACGGCCTCTCCAGGCTGAATTCACATTATGGTTGCCATGGTTTCCTCTTCTATAAAGTGGTTTCATCGATACTGACATCTTTGGTGATGCTTTACAGGAGACTGACTACATCCTCTGATTGTAAGTGCCTGGGACAACTCACAAACAGCCTCATTTGGTTTTGCAACCTCTCCATGTAGAAAAGCAAGGGCAAGCTTTACTCTAGGTGCGCTGAGAAATCAAACGACCTTTATAAAAATCACAAAAGTCAGAAGCAAACCTGGGAATAAATCCAAGGTTTCCTGATTCAACATTTGTATCTTAAGTGTGTGTGTTTGCTGAGGACCTTGCTGCCGTCAATAAAATAGAACCAAGTACTGTGT EMBV3_40152 GGACAGTGACCCCAAACCCAGTTCCCCAAAGGTGAGGGAATATGTCTCCAAAAAGGTCCT Gene GeneID:529591|PHF20:XM_002692452:481_cdna Constitutive 0 NULL GeneID:529591 13 GENE PHF20 NULL PHD finger protein 20 EMBV3_17953 CTGTACACTGAAAATCAAACCTCTTCCCCTCGCCCTAGTCGGTTCTTACTCTGTCTGACC Gene GeneID:535754|SAP130:XM_002685208:72_cdna Constitutive 0 NULL GeneID:535754 2 GENE SAP130 NULL Sin3A-associated protein, 130kDa EMBV3_14080 TCAACGTGTGTGTGGCCACGGTCCTCACGGCCGGCGCGTACCTCTGCTACAGGGTCTGTT Gene GeneID:508658|PTPN1:NM_001100326:961_cdna Constitutive 0 NULL GeneID:508658 13 GENE PTPN1 NULL protein tyrosine phosphatase, non-receptor type 1 EMBV3_30654 CAGAGGGGCTGTCAGGGCAGTTGTGTGCCGCTGGAAGAAAAACCCAAATCAGGTAAAGAA Gene GeneID:784805|LOC784805:XM_002691657:394_cdna Constitutive 0 NULL GeneID:784805 11 GENE LOC784805 NULL hypothetical LOC784805 EMBV3_00744 TGCTGTTCTCAGATGTGCTGGCATCCTGCGCCTGCCCTTTAGCCATTGCCCTATCTATTA Gene BVT0102_048076 + 1 EMBV3_27458 GK000003.2:42559235-42560282 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169678 1 XLOC_103418 Coding TCONS_00169678 XLOC_103418 Coding Coding EXTL2 3:42559325-42578056 j TSS126971 3663 1 TCONS_00169678_3 330 6 0.804751735184197 0.000157540969464111 0.00137763953499075 0.000273166238067999 0.000394971998855186 0.000159576323024252 1.0722556255624e-16 2.91568010982232e-05 0.000149737185886894 3.68805388565428e-161 9.46734458227314e-05 5.68627421829891e-06 6.66090976396065e-24 1.83631243333549e-05 0.00102295716100187 0.00175930967335273 2.83385738105058e-14 1.507233040356e-10 1.81854324255831e-22 0.000123955406432312 3.56480256708188e-05 6.25087652852269e-05 9.46353771112694e-25 8.60312986291097e-26 1.6936228939483e-16 0.000126480983094604 0.000306917353878165 4.04322676495311e-05 4.39570212953663e-35 5.05136793823026e-05 3.09523383400682e-11 XM_005204167.1 EXTL2 PREDICTED: Bos taurus exostoses (multiple)-like 2 (EXTL2), 0.0 5813 100.00 0.87960687960688 NM_001033025.2 EXTL2 Homo sapiens exostosin-like glycosyltransferase 2 (EXTL2), 0.0 1602 83.36 0.418236418236418 TCONS_00169678_3 sp|Q9ES89|EXTL2_MOUSE EXTL2_MOUSE Exostosin-like 2; 0.0 582 87.88 0.996969696969697 1 coding 0 0 0 0 -0.0340912752599314 0.856130587976646 -0.000338687657542996 0.994515449059636 GCGGAGTTGCGAGTTTTACAGAAGCCAAAGAGAGGTGGCATCCTGTAGGTGGTCTCAAGGGCCGACTTGGAGTCAAGTCCCGCCACCTGTACTCAGGAAGAAAATCCTGAGGTGGCAACCCACGAATTGGGCTGGCCGGAAGGTTGAGAGCCCGCTCACGTCCACTCCGACTACCTATCACTGCTGTTCTCAGATGTGCTGGCATCCTGCGCCTGCCCTTTAGCCATTGCCCTATCTATTAGCATCAAATCCCGGTTTGTTCGGTAGCAGTGCTTAAGAATCCAGTCTGCAGGAAGCGCAAATGATAGGAAGCGCAAATGATGATGGTTTTGCTGGGTGAACTCTATGAGTACCCAAATCCTAGTAATCCACCCAGCCCTGCGCCCCCAGACAGCGCCTGACATTTCTGTACTGTCACGCAGGAGGCAAATACCTTCCGAAAGAATGTTAAATGTATTTAAAAAGAGTTCTTTTTGAAAGGAGTGCTTACGAGATCGTGTTGAAATTGAGATTCGGTTAAGGCATTGACTGATTCCCCGACCATCTCAATCCTCTGTTAACCCCAAACTCGAGTTCGTACACGTCCCTTTTACTTCCAGGTCATCCCAGAGGCCGGAGCCGCGGCTCTGATTCTCGTGAGAACCCCATTGCCCATTTCAGGGAAGCTCAAGGAAAATTCACTCGCTGGTGGGACACGAGGGCTTGCGGAGCGTGGAGGGGCGAGCCTGCGGACCAGTCTTGGGCCCCACGGTCTCCGGAACTCCTCTTCTGTGTCTTTCCGGGAAATTGGCGTTTCATCCAGGTTATCAATCCAGCGAATGACGCCGAGTGAATGCAAACTGCTGGGTTTGGAGAAAAAGCAAAAAATGAGTAAGCGAGACGCCCCTTGCGTTTTATGATAACCAAGCTGCAAGCAAATAAATCGCCTAGGTCTCACTGCAGTCTTTTCTTCACGAGAGTGCCAAGAGAGCCTGTTCCTATCAATTACTGAAGCCATAAGGAAAAATTTTTCAAAAATTAGAACTTTACCATAATGAGGTGTTGCCACATCTTCAAGCTCCCAGGAAGAGTGATGGGCATTCGTGTGCTTCGTCTCTCTTTGGTGGTCATCCTTGTGTTACTGCTGGTAGCTGGGGCTTTAACCACTTTACTCCCTAATATCAAAGAAGACAAGATGCTCACTTTGCGTAGGGAAATAAAATCTCAGGGCAAGCCCACCCAGGATTCCTTTACTCTCATAATGCAGACGTACAATAGAACAGATCTCTTATTGAGACTTTTAAATCATTATCAGGCAGTTCCATATCTGCATAAAGTGATTGTGATATGGAACAATGTTGGGGAGAAGGGACCAGAGGAGTTGTGGAACTCCCTAGGGCCTCACCCTGTCCCCGTGAACTTCAAAGCACAGACCACAAACAGAATGAGAAATCGACTCCAGGTCTTTCCTGAACTGGAAACCAAAGCGGTGTTAATGGTAGATGATGACTTGCTGATTAGCGCCCAGGACCTTGTTTTTGCTTTTTCTGTGTGGCAGCAATTTCCTGATCAAATTGTAGGATTTGTTCCCAGAAAGCATGTGTCTACTTCCTCTGGTATCTACAGCTATGGAGGTTTTGAACTGCAGACACCAGGGTTTGGAAATGGTGATCATTACTCGCTGGTCCTGATTGGAGCCTCCTTCTTCCACAGCAAATACCTGGAACTCTTTGAGAGGCAGCCTGCAGCCGTCCATGCTTTGTTAGATGAGACGCAGAACTGTGATGACATTGCCATGAATTTTATCATCGCCAAGCACACTGGGAAGACTTCAGGGGTATTTGTGAAACCTGTAAACATAGCCAATTTAGAAAAAGAAACTACCGGTGGCTATTCTGGAATGTGGCATCGAGCTGAGCACTTTCTGCAGAGGTCTTATTGTATAAATAAGCTTGTTAACATCTATGACAGCATGCCCTTAAAATACTCCAACATTATGATTTCTCAGTTTGGTTTTCCATATGCCAATCACAAAAGTAAAATGTGAGAGTGAAACAGGCAAACAAAAACAAACCTCAGAACTGCTTGTTATTTGAGTAGCTGCTTCGTGCTCTGGTTGGTCTTTTTATTTATTTATTTTTAAGCACCATCACGGACTTTTTTTCTACTCCAGAAGTCTCTACAAAAGGGAAGAATGCATGGGGCTTCTAGGATGTACAGTTTACATGTGCTTCAAAACCCAAGAAGCTGATATTATCCGGATAGGTCTTGTGATAAGTCTTCATTCATGGATATAATTCCTTGGTCAACAATTTTATTGTTTACATGCTCAGACTGTTCGACAATTTTTTAAAATTCAAGTATAGTTGATTTACAGTGTCATGATAATGCCCTAATATTTTGTTTTTTGACTCCTGGCACTTGCCTTAAGGACCTTTAGCAAGCCGTTTCCAGGATCAAAATCTCCAGAGAAGTATTTCTCAGCTTTTTCATTCAAGGATGATTATTTTCATGTGAAGCCTGAAATGCCTCTTTCTCAAAAGACTGTGGTGTAGGGAAAAGCCATGTGAGGAGATAACAGTCTCAATCCCATATAGAAACAAGTGGAGATTTTGTGACAATCAGGGTTTCCTTTCTGGTTCTTCCAACCAGCCCTTTCTAGGACTAGCTCGTCCCAGCATGGTTTTGATGCAACCATCAGCACTTTCTGTGGTTAAGTCTGTTGTGACTGGTTGGGTTAATTTTAGTAGCTGAATGATGTCTAGTTGTTTGCTTGACTTTTGTGAACATTTACTGCATGGATCACAAAAAAGTGCAGCCTGTATTTTTTATAAGCAACTTCTATGCAGCAAGGAGTTAATGTGTTACTAGATTCAGGTCCTGCATTTTGGCACTTAATCTGGCTTTTAGATTGTACATTAATTTTTAGATTTTATATAAAAGATGTATTATTTAAGAAACATGCGTAAAATAACTCTTCTGACAGAGTGATTCAGTAAGACCAGGCAGAAATTAAAACCCTTACTATCAGATGATCTTTATTGCTATAAAAGCATAAATTATCTCATGGATACTAAAATGTTGGTGTGTGTTACACACAAAGTCAGTCTCTTGGATTCTGAATTCCCCCTCCGAGCCCCTGCTGCCAAACGATTCAGAGATCATGATTAAATTTGAATTACATAGATGTAGAAAAAAAAAAAAGACCTGAGTCATAGCAGAGAAATTCCACAGGGAGCCTGCATCAGTTCATTGTTAAGTTGCCCACTTTCATGAATGTGTGAATGAATGTTACATGAATTAGTGTCTGTTCACACTGTCTGTGTTTGGTCCTTAATTCACTAAAGGAATACTTAATTAAGCCTCTTTCCACCACATTCTCCTCTTCCTATTCCCCCTCCTTCTCCCATATTCCATAATGATCTCAAAATGGCACAGCTATGAAAATAATCATGGTTAATGTTCCAACAATGAGATCTCTTGTGCAGTTAGCTCAGTGTATATTGTTCCTTCACATGGGCATGTGTATGTGTCTTAATGCCATCTGAGAAAACCAGTAGAACTTGAAGCCTCACTAAAAATCTGTAGTGTTAATTATCTGCTTTGTCAAACCTTGGTAGTGATTTTTTTTTTTTTTTTGCCTCTTGAGATTGACAGATAAATAAAATAAACTTTTACCATCCA EMBV3_40236 CCTGGCAGTAGCCTTTGTGCTGAACCAGATGTCAGCAATCTGAAGGCGATCTTACAGAGC Variant GeneID:526516|HOOK2:NM_001024555:44_cdna 231^303 1 EMBV3_37547 GeneID:526516 7 GENE HOOK2 NULL hook homolog 2 (Drosophila) EMBV3_36385 GACCTGGAGCTCCTGCTAGGCATCGCCAAGCCTGGCTCTGGCCCTTCAAGGAGACTGTGC Variant GeneID:541086|MAN2C1:NM_001110085:130_cdna 622^811 1 EMBV3_08864 GeneID:541086 21 GENE MAN2C1 MGC127782 mannosidase, alpha, class 2C, member 1 EMBV3_40263 CATGGTGACGGACGGCGCAGCTTATATTGGAAATTTTGACTGGGTGGGGAATGACTTCAC Gene GeneID:617120|PLD5:XR_082708:135_cdna Constitutive 0 NULL GeneID:617120 16 GENE PLD5 NULL phospholipase D family, member 5 EMBV3_31378 AGCATCTTATCTGAGAATGAACATAAATCAGACGGCGCTGCACGACCCAGTGCCTGATGC Gene BVV0102_147546 + 1 EMBV3_09776 GK000013.2:59490019-59903158 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23534 ATGTCGTGGGAAGGATGACAGAAGACAAGAGGAAGAGAGACACATCACACATAGGCCTGG Gene GeneID:537311|THAP8:NM_001102200:697_cdna Constitutive 0 NULL GeneID:537311 18 GENE THAP8 MGC165969 THAP domain containing 8 EMBV3_21430 CTAAACCGACCCATACTGTATGGTGAACAGCAATAAAATAACTCAGGATGGAATGAAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17539 CTGGCGTAACAACTCGCGACTAACCTGCCTGAGATGCATGTGGGTGATTGGATGCTCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30240 CAAGGCGATGTGGAACCCCGAAGAATTGTGAGACACCCTGACAGTCACCAGCTCTTCATT Gene GeneID:534214|G3BP1:NM_001037611:8_cdna Constitutive 0 NULL GeneID:534214 7 GENE G3BP1 G3BP MGC133963 GTPase activating protein (SH3 domain) binding protein 1 EMBV3_12234 AGAGTTTAAGTGACTTTCCATCAGCTTTCTGCCAGGGGACTCATCCATGTCTGGAGAGGG Gene GeneID:281534|TLR2:NM_174197:2_cdna Constitutive 0 NULL GeneID:281534 17 GENE TLR2 NULL toll-like receptor 2 EMBV3_37176 CAGTCAGCCCTCAGAATCTCTTCTATGCAGACTTCTACTGTCTGGGTGTGGGGATACTGT Gene GeneID:786654|MGC152396:NM_001099199:25_cdna Constitutive 0 NULL GeneID:786654 25 GENE MGC152396 NULL hypothetical protein LOC786654 EMBV3_00474 GAAAGTCCAAATTCAAGTGCGAGCAGCAGTACGTGCTAAAAGAGAAATAGGGCTGGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31994 GTACCCTGACTTCCAAGGACAGCAGTTCATTCTAGAGAAGGGTGACTATCCTCGCTGGAG Gene GeneID:282203|CRYBA2:NM_174524:26_cdna Constitutive 0 NULL GeneID:282203 2 GENE CRYBA2 NULL crystallin, beta A2 EMBV3_34193 TTGGCCCTTCCATTGTTTGGGTCCACAAGTGATCTATAGGAAGGCAGCTGTTCAGTAATC Gene GeneID:539940|UBXN7:XM_002684801:168_cdna Constitutive 0 NULL GeneID:539940 1 GENE UBXN7 UBXD7 UBX domain protein 7 EMBV3_29915 GTGCAGCGCAACTATGGCTTCCAGATCCATGCTCTCGGACTGCAACAAGGAGAACACGCT Variant GeneID:511680|TRIOBP:NM_001046096:52_cdna 286^395 1 EMBV3_05620 GeneID:511680 5 GENE TRIOBP MGC137642 TRIO and F-actin binding protein EMBV3_31636 CGCACAGGGCGAAAGTCTTGTTTTGGTGTTTGCTCATCTTTGTAACAGCCACGTGTGTTC Gene GeneID:617333|LOC617333:XM_002691564:24_cdna Constitutive 0 NULL GeneID:617333 11 GENE LOC617333 NULL similar to Olfactory receptor 1J4 (Olfactory receptor OR9-21) (HTPCRX01) EMBV3_21608 GAGGGTTTAGGTTTGGGCAGGAGCAAAGAGAATTTCCTAGCCAGGGTTAGGTTGCAAGCA Gene BVV0102_160409 + 0 NULL GK000029.2:44800853-44803790 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01898 TCCAAAGACAACCTCTCCTCCTGGACCAGCTGGGGCTTATCATCACCAGGGCTGAATCTA Gene GeneID:616826|IL28RA:XM_002685710:397_cdna Constitutive 0 NULL GeneID:616826 2 GENE IL28RA NULL interleukin 28 receptor, alpha (interferon, lambda receptor) EMBV3_01506 GCCACAGCTGCTTAGAGTTTCTGTTAGGGTAGCCAAGTTCAAGTCCAGCAAATGCATCTC Gene BVT0102_365186 + 0 NULL GK000002.2:105204900-105338357 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111319 1 XLOC_067219 NonCoding TCONS_00111319 XLOC_067219 NonCoding NonCoding - 2:105287125-105287479 - TSS82940 354 1 TCONS_00111319_1 67 0.384180790960452 1 0 0.00011530245724078 0 0 0 0 0 1.6473749523059e-05 0 8.91540967802978e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000976524460911762 0 0 0 0 noncoding 0 0 0 0 GCAGTCATTTGAGTATAAGGAATGCATCTAAATGTATTTCAGATGGCTGTAGCCATTCACCCCAAGGCTACAGCTCTGTCTACTTGGGGAAGGAATAGGGCTCTGCAAACTGCCCTCAAAGAGGCAATACAAAAGGAGATGCATTTGCTGGACTTGAACTTGGCTACCCTAACAGAAACTCTAAGCAGCTGTGGCTTCAACATAATAGACGTTTCTTCCATTTAACAGCCTGGGCTCACATGGCTCAGAGCTGGTGTGCTCCATGAGCAGTGGACACAATGCTTTCTATCTTGCTGCTCTATCATCACTAGGGTGTCACCCTTACTCACATGGGCCACCGTGTTCACATCCCTC TCONS_00103261 . 5' 50879 TCONS_00103261 . 5' 50879 EMBV3_31979 ACTACGCCTATGGTTCTAGAGGGCACCCAGGCATCATCCCACCAAATGCTACTCTCATCT Gene GeneID:526524|LOC526524:NM_001077969:131_cdna Constitutive 0 NULL GeneID:526524 11 GENE LOC526524 NULL FK506 binding protein 1A, 12kDa-like EMBV3_15753 CTGGCCTCCCAGGGTCAGTTGTGTCTCACGGAGCATTAGGTTTTCCTGTTACTGCTGTTT Gene GeneID:506192|AP1B1:NM_001045938:35_cdna Constitutive 0 NULL GeneID:506192 17 GENE AP1B1 MGC128441 adaptor-related protein complex 1, beta 1 subunit EMBV3_41254 AGGCTTGTACCAGCTTACCAAGCTGCGCTTCCTGACCTCGGGCCCACACCTGCCTCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13692 GGCCCCAGCATACCTCAGTCCTATCACGGGTCAGATCCTCCAAAGCCATGTAAATGTGTA Gene GeneID:539109|MMP11:XM_002694692:285_cdna Constitutive 0 NULL GeneID:539109 17 GENE MMP11 NULL matrix metallopeptidase 11 (stromelysin 3) EMBV3_17669 GTGTCAGCGGGAGCGAAAGCGAGAGTTTAAAGAAACAGGAGGCCCACAGAATTTCCTATG Gene BVV0102_050895 + 0 NULL GK000013.2:21454411-21595580 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042228 TCONS_00042227 TCONS_00042226 1 XLOC_025621 Coding TCONS_00042226 XLOC_025621 Coding Coding PLXDC2 13:21593296-21596172 o TSS31483 1856 3 TCONS_00042226_1 48 0.105064655172414 3 0.355478260869565 0.000498514268408335 2.36307066555988e-05 0.000911281994299753 7.46940447109748e-128 4.17961452234984e-152 0.000387661870785298 9.33447899355394e-28 5.41244259784397e-05 0.000106869664452431 3.56408377226147e-80 3.51530055029714e-134 1.85826630819752e-63 2.09999973744236e-43 6.48772377665242e-05 4.20961852118566e-236 2.71347889511899e-217 2.17736795277442e-43 0 0.000267618136898684 0.00049641965162247 2.45701194425667e-06 2.79866355953124e-55 6.876058168665e-126 2.05474553771509e-268 5.58485142106317e-05 3.59990363249599e-05 0.000245206400829703 8.20485461806348e-14 4.0936788010719e-06 1.11082805639314e-53 XM_005214189.1 PLXDC2 PREDICTED: Bos taurus plexin domain containing 2 (PLXDC2), 0.0 1346 100.00 0.401400862068966 NM_032812.8 PLXDC2 Homo sapiens plexin domain containing 2 (PLXDC2), transcript 9e-176 621 79.08 0.389008620689655 TCONS_00042226_3 sp|Q9DC11|PXDC2_MOUSE PXDC2_MOUSE Plexin domain-containing protein 2; 2e-13 63.5 84.38 0.911764705882353 0 noncoding 0 0 0 0 -0.20588161606143 0.225560361123519 0.0171342205182355 0.749910075932333 GGGTGTAAGGTTACCCAGAACTTAAAAACGCTTGCCTGGGCAGAAGTAAAAGAACCAGGTTGTGTAAATAAGGTGAAGAGGGACAATCAACTGGTTGGAAGAAAACTCAGGAGAGAGCAAAGAGCATTAAAAAGTGTGTGTGCTTAACATTTGCAAAATAGATAGCAAGTTGAGTATGGGGTTGAGGACAACAGGGTACACTTTTTGTTTCTCTTCTGCTCACCAGCCAAGTAACCATCAGAGAGGCATTCTTTGGGCATCAAATTGGAAGAGTAGTTTAATTATCTGGCTCCACTTCCAGTGGGTATTGAGACAAAATTAAGGTGGTTATGGATGGCACCCATCAATTTTTCAGAGCACGGAAAAGACTAACAGGACCGTTTGCACTTAGAACATTAAAGCGACTTCTCCATTTGATTTATAACGCCTTGTCTCCTCTTCCTTCCCTTTCTTCTCTTTAAGAAGCATAAAGTCATGTACTTCGTGCTAGGCACTGTTCTCAACTCTTTAATTATTCCGTATTAACGCATTTAGTCCAATGCAACCACCTTATAAGGGTATAACTACAATTCTCCCCATTTGATGGATGGGGAACTGAGACACTTAAGAAAAACAAAGCCATTTAGCTAATCAGTAGGGGAGGTGGAATCCTAACCCAGTCTGGTTCTAGAATTTTAACCGACGTGCTGCTTCCCTTTTTTTTTTTTGTAAATCTTTACCCCCATTAAAATAAAGTTAACTATTCAAAACAAGACTATTGAGAGGTCTGGAAAGGGTTAACGCTGAAGCACTTCCGCGAGCTGAAAAAACAAAAACAAACGAGCCAGCGAAAGCCAGTTAAAGCCCCCGTAGGAAATTCTGTGGGCCTCCTGTTTCTTTAAACTCTCGCTTTCGCTCCCGCTGACACTTTATAACAAAGCCGCCACGGCGGGTCCGAGCCGCCGCGCGCTCCCTTCCTCCACCGGCCCCGCGGGTCTGGGGTCCGAAAGGGCTTCGCTGGACTGCTGCAGCCTGAGCCTGCCCAGGGGCTTCTCATCCCTCCGGCTGCGGGCGAGGACGCGCGCCCTGCGTAAGGGCGAAGAAAAGAAGAAAAACTTGTCGGAGGGCTTTCGCCAGCCCGCTGTTAACCCCCTTCCCGCAAACCTAAGCCTCCTTAGAGGGGGGCCATCCCAAGACTGGGGAAAGTTCCTTCTGAGCCCTCTTGGATTTGGAGGAGGCACCCGCGCTGGCTGTGGAATTAGATCTGTTTTGAACCCAGTGGAGCGCATCGCTGGGGCTCGGAAGTCACCGTCTGCGGGCACTGGGGTGGCGCTGCCTGTGCGGAACAGAGAGTTTGCCAGCCCCAGTTGCAAGTGGCCTCTCGTCTCCGCAGTTGTTGTTCTGTGTCTGGGGTGAGGACTGCGAGTGTTGTGGGAAGTTCTGAAGGGAGACCTGGAGGTCCGGAGAGGACTGCGCTCTGCTCGCACCCGCTTCTTCCTCGTCCCGGCTCCTGGGTGTGCAATCCCAGAGAAATTTACAAAAGCCTCTGCGTCCCTCCGAGACCGGTCCGCAGCATTCAGCCCCGTTGTCCCCATTCCCAACGGGAACCCCGGAGCAGCACAGGGCGCCAGGGAAGGACTGGCGGGGAGCGGGAGATCGCGGCGGCAGCATGGCGAGGTTCCGGAGGGCCGACCTGGCTGCTGCAGGAGTTGTGTTACTTTGCCACTTTTTAATGGACCGGCTTCAGTTCGCTGAAGGAAAGCCTGAGCGGTAAGCAGGGGATGGTACTGTCTTCCCCCGAGGCGTCCTGAGAGGGCTCGGTGTTAGAAGAAACCTTCCCGCGGGTACCTCCCCAGGAGCTGGCATCCTGCTCCGTG TCONS_00042227 TCONS_00042231 s 5' 0 TCONS_00042227 TCONS_00042231 s 5' 0 EMBV3_09164 CACAGTGGCCTTCTCTCCATAGTGGCTGTCGCCGGTGTGATATTCTGCTTAACCCCAAAT Gene BVT0102_038643 + 0 NULL GK000022.2:54881849-54903387 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131595 1 XLOC_080300 NonCoding TCONS_00131595 XLOC_080300 NonCoding NonCoding - 22:54894678-54896453 - TSS98462 1775 6 TCONS_00131595_7 73 1 0 6.89866586361446e-05 0 0 9.35679208349223e-06 5.28486987975706e-05 0 0.000124847992393459 4.66512805050801e-05 6.22320941879357e-05 4.63604912025255e-06 5.02976485528212e-05 0 6.46599876530348e-06 2.65013419608747e-06 0 0.000535671713819981 0 0.000353392963280193 0.000105038933136886 0.000101287890199232 9.74854708857944e-05 0 0.000387636852089576 0.00015111778278094 0.000156134618392677 0.000166709656124716 0.000148541856661455 0 1.91449321408562e-05 0.000128713449243968 XM_005223036.1 ZDHHC3 PREDICTED: Bos taurus zinc finger, DHHC-type containing 3 (ZDHHC3), 0.0 3200 100.00 0.99887323943662 XM_005265209.1 ZDHHC3 PREDICTED: Homo sapiens zinc finger, DHHC-type containing 3 (ZDHHC3), transcript variant X1, mRNA. 3e-54 217 65.97 0.460845070422535 0 noncoding ATGCCAGCATTAGCAGAGATGGGCCTGGGCAGGCGGCAAGGATCCTGGCTGCTCCCCAGAAAGGGCTACCCACCACCAACCCCCTTGCCTGCCTTACTAGGAGACAGCCATGGTGGCCTTGGCTGCCTCCAGGGCTTCAGCTTGGTTTGAGAGAGGGCCCCACACATGTGGGACATGCACGGTAGGCACGAGCCTAAGTTGTGACAGCAGCACCCAAACAGCTCGCATTCCACAGACACCAGAAGCCTCAGTCCACTCCGAGGCATCCTGTCCCAGGGCTAAGACTCTGTCCACTCCCGGTGGAGGGGCAGAAGGACAACCTATGTAGAGCTCCTGGAACTCCAACCTCCCCTGTGAGAACTGCATTTAACTGTCCCTCCTGAAAAGAGTCTAACCACCCACATGGGCAGAACTGACCAGAAAATCTGGCCTAAGAGTCTTAGGCCTGTTCTCCCAAGACAGTGTCCTTTCTTGGGGCGTCTCTCTCAAACCATGAATGGGGGCCAGGGCCTGCCGATTGAGAAGCAGGAAGGTCCCCTGTCACACACACAGACCTCCCACACTACCAGGCTGAGCCGGGACCCTGCTCATCCCTTGTGAAGCCTGAAGTGTCCGTGATCATTCCTGAAGGCCTGAGCAGAGCGTCCTGGGTTCACAATCCCCGTTCTCATAGCAGCTGAAGCAGCATCTTTCACAGAGTCCAGCAGAGGGTTGGCGCCCTGTGGTGACTGTGGGTAAGAAAGGAAGGCCAGGCAGTGGCCTAGTTCTGGGAGGGCACCCTTGGGCATTCCATAAAGGTGGCGATTGTCAGAGAGACACTGCCGTCCATCCCCAGTGACCTGCCAGGCTCTGGGTTTTCTTGTGGAGGGGCTGCTTCTTTCCTCATCCCAGCTCTAATGATGTCTCACAAGAGGGCGACAACAGGACTCTGGCATTGATAGAGTAGTTGGCAGGGCATGGGGCCTTCCACACCCAGGCCGTAGGCCTCTTTTCTGGGTCCGTATCAGCTTTAATATTTATTAACGGCCACATAAGGGACCCTGGGGGCTCTTAAGCCTGTTAACTCACCATCTAGGCAGGATGTGGCTACGGAGGCCTGCTAGTTTTTATCCTTACCCAAAAAAGCATCCAAGGCACAGGCTTGATGGACCGTACACCCAAGAGACTCCATGCTGGGGAAGGAAAGCCATCCCAACCCCTGGAGTCCCCAGGAGGCCGTGGTTAGAAGAAGGGGAGAGGGGTCACTGGTCACTGTTTGCAGACAGCTTCAGGGGTCTCTGCTGAGTCCAAGCCTGAGGTCAAAGGCATGTGCTGAACCACAGGGCCCCTGAGAAATGTCCCTGCATGACAGGTTTGAAACTGGTCTTCCTCTGGTCATCATGGCCTGAAAGCAGAAGTACCCACCAGGCCCAAAGCCACTTCTGCTTTCAGATTGTTGGGTGCAGAGGCCTTTCACCTGCACAGAGTGGGACCCAGCCCCGACCCCTCTCCTCGCTGAGCCCATCTTCCTCCACACTAGACACATGAGACCATGTCCCAGGAGAGGCACCTGGGCCGTGTGGGAATCACCTGCCCAACCCTAAGCCTCGTGGCCTTGCACCAGCAACCACAGTGGCCTTCTCTCCATAGTGGCTGTCGCCAGTGTGATATTCTGCTTAACCCCAAACTTACCACTGGGCAACTGATGTCAGAACAAGCTGAGGGCTGCAGGGAGGGAGGCCAGGCACAAGCCTCCACCTCTTTGTTTGAATAAAAAGCTCTGTGGTCCACCTCAG TCONS_00129182 TCONS_00129183 TCONS_00129184 TCONS_00129185 . 3' 6935 TCONS_00129182 TCONS_00129183 TCONS_00129184 TCONS_00129185 . 3' 8709 EMBV3_38397 AGTGACTGGGAAAATAAACCTCCTGGGCCTGGTAGAAATCGTCTTGCTCAGTGTTGGTGT Gene GeneID:281052|CD36:NM_174010:2_cdna UTR3_Alt 2 NULL GeneID:281052 4 GENE CD36 NULL CD36 molecule (thrombospondin receptor) EMBV3_32364 CCGTCCGGATCCGGCCCATGAACCGAAGAGAAGCCAACCAAAGGTATTTGCATATGATCA Variant GeneID:534909|KIF13B:XM_002689472:75_cdna 75^168 1 EMBV3_30366 GeneID:534909 8 GENE KIF13B NULL kinesin family member 13B EMBV3_00537 GATCCAGTCTAGGAAATGAAGACTGAGGAAAGAGCAGGCAGGATCTTGGTGTCTACAGCA Gene GeneID:535907|KCNH4:XM_002696028:482_cdna Constitutive 0 NULL GeneID:535907 19 GENE KCNH4 NULL potassium voltage-gated channel, subfamily H (eag-related), member 4 EMBV3_33217 GACGATGTGCGGCGGATGAACAAGCGGCAGTGGCAGCATGGAACCTGCATTTCATAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42087 CCGCTTTGAAGATGTTCGGACTTTTCTGGGGGCTGTCACCAAACTGGGCTTCAAGGTCAT Gene GeneID:540208|RRP8:XM_002693150:67_cdna Constitutive 0 NULL GeneID:540208 15 GENE RRP8 NULL ribosomal RNA processing 8, methyltransferase, homolog (yeast) EMBV3_41268 ACTTCGAGGCTGTGGAGTTGGAGGACAATGAACCTGAGCCAGGAGACCTCTTCCTATTCA Gene GeneID:788895|LOC788895:XM_002696576:196_cdna Constitutive 0 NULL GeneID:788895 21 GENE LOC788895 NULL similar to rCG24645 EMBV3_24664 ATCGTCCCAGAAAAAATCAGAGATGAGGTTCACACAGAGGTCAAGTGTGTTGGCCCTGCG Gene GeneID:539014|LOC539014:XM_002692630:89_cdna Constitutive 0 NULL GeneID:539014 14 GENE LOC539014 NULL hypothetical LOC539014 EMBV3_29494 AGAAGCCGGTGGAGACCGAGCCAGGTAGGCACTTAGAAACTTATCTGCTGGACTGTGAAA Gene GeneID:782252|NKX3-1:XM_002689779:17_cdna Constitutive 0 NULL GeneID:782252 8 GENE NKX3-1 NULL NK3 homeobox 1 EMBV3_18065 TACAGCCCATGGGATTGCAAAGTGTCAGAGAGGACACGACTGAGTGACTAACACACACAC Gene BVV0102_079994 + 0 NULL GK000007.2:8010665-8067696 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218776 1 XLOC_132095 NonCoding TCONS_00218776 XLOC_132095 NonCoding NonCoding - 7:8015799-8016830 - TSS162774 1031 0.191076624636275 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000611915947232607 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005228379.1 MBTPS2 PREDICTED: Bos taurus membrane-bound transcription factor peptidase, site 2 (MBTPS2), transcript variant X3, mRNA. 1e-13 82.4 83.33 0.0746847720659554 0 noncoding 0 0 0 0 -0.0812565382802423 0.608930703643252 -0.0279511240304434 0.632851075270839 CTTTCCTTGCCTCACACACTCATGGTGTTTCCCTGATCTCACCTTCCTGTCCAGTATTTCCAGATGGTTCCTCAGCTAAATATGCATTTACTGAGCATCACATTCTCCCACTACTGACTTTTGGAATCTTCTGTAAGCAGCTTCTCCAACAGGATAATGATCCCCTATGTCATGGTTTCCCAACTGGTGCTAGTGATAAAGAATCTTCCTCTTCTTCTTCTTCTTTTTTTTTAAAAATCTCTTTGTTCTAAATTAGTGCCCTCATATTTAAGGATGAAGAATCCTTCCAACTAGTTTTTTGAGTTGATTGTTAAAACCCTTCCTTTTCACATTTTCCTCACTGCTGCTTCCATTTCAGACCTGATGCCCTTTGCTGAAAATGAGAGATGAGAGAAGGGGAATTGAGATTAACTGACTCCTTATTGTGAATAAAACCTTCACAGCATCTCCCATCTATGACGGAGCATGCACAAATCCTTTCTGCATCAAATACAGAAGGCCCAGAGTCCACAAAAATATTTTTATTTCCTTTAAACTTAGAAGAAAAAAGATGATTATTCAACAGAGGAGTCTGGTGGGCTACAGCCCATGGGATTGCAAAGTGTCAGAGAGGACACGACTGAGTGACTAACACACACACGTGTCTTTATACCAACAATAATCTATAAAATAAAAATAAAAAAAATTTTATTGATGAAGGGGCCAGAAAAAAAAAAAGAAAAACATGCCTCTGGCTCATTAAAGTTGCATTGCAGTCCTGCCTTTCTTTCCCTTTGATAGACTGGTAATCAAATAATGAGTTACCTGAAAGCCAAGTTCACAAGTATTTTTCTCATCTTTTGATCTATTAGCCCCTCACCCCCAAACACAGCACCAGGTGCATAGCAAGTACTCCATAAGCATTTGCTGAATCAATAAAATCTTCAAGGGAAAAGCTTATTGTGATGAGATGTCTAAGGTGACAAAGAGACTGACTGGCAGAGCTGGGAGCAGAACACATTCTGACCAATTCTAAGATGTGTTCTTTCAAC TCONS_00215345 . 5' 5136 TCONS_00215345 . 5' 5136 EMBV3_24275 GGGCTTGGGAAGTCCTTTAAGAAGGCGCTGGATGCCCTGTCTGAATGTTTGAACTGCTGA Gene GeneID:515640|IL1R1:XM_002691178:72_cdna Constitutive 1 NULL GeneID:515640 11 GENE IL1R1 NULL interleukin 1 receptor, type I EMBV3_31925 CCCGATCTCAGATGCTCCCTGCTTCTCCTGGTGTCGTTTCAGCCAGATGTTGCACCCAAT Variant GeneID:506157|ERP44:NM_001035032:54_cdna 235^347 1 EMBV3_09541 GeneID:506157 8 GENE ERP44 MGC127458 TXNDC4 endoplasmic reticulum protein 44 EMBV3_03434 ACTTGTCAGCGAAAGTTCTCCCGTTCCGACCACCTGAAGACCCACACCAGGACTCATACA Gene GeneID:614584|WT1:XM_002693516:255_cdna UTR3_Alt 2 NULL GeneID:614584 15 GENE WT1 NULL Wilms tumor 1 EMBV3_11828 GCAGCCAGAGGGAAAGAAAAGGAGAAGGATGGAACCACAGACTCTGGAATCAAGCTCGAG Gene GeneID:512330|RBM22:NM_001037818:49_cdna UTR3_Alt 2 NULL GeneID:512330 7 GENE RBM22 MGC128706 RNA binding motif protein 22 EMBV3_07623 ACAGCCCTGAGACAAAGAAGACGCGAGTGAAGCTGCCTTCGGGCTCCAAAAAGGTCATCT Gene GeneID:506251|LOC506251:XM_002691782:387_cdna Constitutive 0 NULL GeneID:506251 12 GENE LOC506251 NULL similar to ribosomal protein L8 EMBV3_29535 AGAGCTCAAGACACACTTAGCCACAGCCCACCAAGGGACAAGGATGGGGAAAGGATCATA Gene GeneID:100124500|DUSP27:NM_001102543:2_cdna Constitutive 0 NULL GeneID:100124500 3 GENE DUSP27 MGC152243 dual specificity phosphatase 27 (putative) EMBV3_23237 GCATCAAGCAAGAAGTTCAGGACAGTCAAGGCAGCAGAGAATATTGCCAGAAAAAACATC Gene GeneID:533646|RIT1:NM_001098078:177_cdna UTR3_Alt 2 NULL GeneID:533646 3 GENE RIT1 NULL Ras-like without CAAX 1 EMBV3_40511 TGTCTCGGGCTGCACGGCGTCCGCAGGTGACGTGTGTTCTTCGAGTCCTCGTATGAATAA Gene GeneID:518114|GPC1:NM_001046236:26_cdna Constitutive 0 NULL GeneID:518114 3 GENE GPC1 MGC128751 glypican 1 EMBV3_41968 GCTGGTGGCCTCACTGCTAGTCATGTAGAGAACTTGGAAAGCCTGCAGAGTACTTGTATC Gene GeneID:784973|PDCD7:XM_002690467:372_cdna Constitutive 0 NULL GeneID:784973 10 GENE PDCD7 NULL programmed cell death 7 EMBV3_19979 GAAGCGATTCTCTCCAGATCCTGTTAGGAAGGGGTTGCAGTTGCCTCTAGGACCTGTTTC Gene GeneID:513589|SLA:NM_001024533:23_cdna UTR3_Alt 2 NULL GeneID:513589 14 GENE SLA NULL Src-like-adaptor EMBV3_26420 AGTCGCGCTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGGCAT Gene BVV0102_021249 - 1 EMBV3_08733 GK000011.2:14236377-14305814 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00175509 TCONS_00253103 TCONS_00118459 TCONS_00210913 TCONS_00174805 TCONS_00171428 TCONS_00174806 TCONS_00232824 TCONS_00176420 TCONS_00004714 TCONS_00246739 TCONS_00004712 TCONS_00174809 TCONS_00174808 TCONS_00232829 TCONS_00174807 11 XLOC_151107 XLOC_105290 XLOC_156044 XLOC_072622 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_142307 XLOC_106198 XLOC_001092 XLOC_142312 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_35550 AGTTCAGCAGAGGGAAGAAGTCCTTCTAGCAATGAGAAGCATGTAATGAGTCGTCTGGCT Gene GeneID:504746|ECT2:NM_001097573:7_cdna UTR3_Alt 3 NULL GeneID:504746 1 GENE ECT2 MGC138945 epithelial cell transforming sequence 2 oncogene EMBV3_14617 GGTGGAGGGGAAGTCTTTGATTCTTAGCAGTAATTTGGGTCTGGGGCAGCAAGCTTTCAG Gene BVT0102_354303 - 1 EMBV3_39371 GK000018.2:22541541-22692051 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41164 CTTCCCTTTCTCCCCCTGCCCTTTACCCATTTCCTTCCAATAAATCCACCCAAGGAGAGG Gene GeneID:615823|FGF12:NM_001079789:132_cdna Constitutive 2 NULL GeneID:615823 1 GENE FGF12 NULL fibroblast growth factor 12 EMBV3_11093 TGACGTCCTTCTCAAGCAGCGCCAGCTTCTCCACAGCCACCTCGCTGCCCAGCAGCTCCT Gene GeneID:100337439|LOC100337439:XM_002689179:238_cdna Constitutive 0 NULL GeneID:100337439 7 GENE LOC100337439 NULL KIAA2031 protein-like EMBV3_08006 CTGCCAGGAGAGGGAGGACGGACAGTGTATCTGGAAGTTCTGGGATTCAGGTTGTTATTG Gene GeneID:524543|TSC22D4:NM_001075860:227_cdna Constitutive 0 NULL GeneID:524543 25 GENE TSC22D4 MGC152079 TSC22 domain family, member 4 EMBV3_24960 AGCCGTACTGGACGGCCGCGAGCTGCGGGTGCAGCCCTAGGCGGCGTCGCCGCAGCAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27569 TGACCCTGAAAGCATCAGCTCAGGCCAGGTCTCACCCCTCTTGTCTCCTGGTAATCTAAT Gene GeneID:516516|TRMT12:NM_001024552:35_cdna Constitutive 0 NULL GeneID:516516 14 GENE TRMT12 FLJ20772 tRNA methyltransferase 12 homolog (S. cerevisiae) EMBV3_05626 TTGCCATCCGCTGGGGTTTTATTCCTCTCGTGATTTACCTGGGATTTAAGAGGGGTGCAG Gene GeneID:614074|TOMM7:NM_001113306:41_cdna Constitutive 0 NULL GeneID:614074 4 GENE TOMM7 MGC136996 translocase of outer mitochondrial membrane 7 homolog (yeast) EMBV3_02463 ACAGAGAGGAAGAAAAGGAACAGAGAGTCAGGGAGCAAGCCTGGTATTGTAGGGGAGAAG Gene GeneID:509678|IFIT3:NM_001075414:25_cdna Constitutive 0 NULL GeneID:509678 26 GENE IFIT3 MGC139487 interferon-induced protein with tetratricopeptide repeats 3 EMBV3_35863 ACCCTATCTTTGCCCAGAATCTCTGTGAAGAGATCATTGAAGAGAAGAAGGAACTGGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34430 TCCCTCTGCTGGTCAGACTTTAAAAACTGTTTCTGTTTCTGCTGGTGAGCAGGGTGCCCG Gene GeneID:511774|C1QTNF1:NM_001083409:386_cdna UTR3_Alt 1 NULL GeneID:511774 19 GENE C1QTNF1 MGC143272 C1q and tumor necrosis factor related protein 1 EMBV3_15483 AATAGTTAGCTAAAGAGAACCTCCTGTATAGCACAGGGAACTCTGCTCAGTGCTCTGTCC Gene BVV0102_080942 + 0 NULL GK000029.2:28423744-28458904 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31064 ACTGATTACACCTTCCCACTTGCTGAAAAGCCAAGGTTGAAGCAAAGGAGGAGTCGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16604 TCATCTGACAAATCGAGGACGATACCTACCTCACAGGGTTGGCGTGAGGATGCTGTGGAA Gene GeneID:508049|POLR3D:NM_001024499:67_cdna Constitutive 0 NULL GeneID:508049 8 GENE POLR3D MGC139552 polymerase (RNA) III (DNA directed) polypeptide D, 44kDa EMBV3_23031 TTTTGACCAGGATGACTGGGCTACCTGGACCTCGTTCCTCTCGGGGGTCAACATCCAGAT Gene GeneID:540303|ENO3:NM_001034702:159_cdna Constitutive 0 NULL GeneID:540303 19 GENE ENO3 MGC128156 enolase 3 (beta, muscle) EMBV3_30892 CAGTTTTAATCAGCAGACCGTGGACTGGCATCCGGACCAGCAATACCCTCGACCAAATGA Gene GeneID:530871|QPCTL:NM_001075940:292_cdna Constitutive 0 NULL GeneID:530871 18 GENE QPCTL MGC142489 glutaminyl-peptide cyclotransferase-like EMBV3_24597 ACCACATCTCTTACTCCGCTGTATGATGGGTATTGGGGCCCAGCAGAGCGAATCCTTTTA Gene BVV0102_066103 + 0 NULL GK000020.2:4096596-4315436 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07426 GTTGTACTCACTTTACCAACTTTTTTCTTTGATGAAATTATATTACTGTTGTGTTTTCAC Gene GeneID:521905|CCDC73:XM_002693493:137_cdna Constitutive 2 NULL GeneID:521905 15 GENE CCDC73 NULL coiled-coil domain containing 73 EMBV3_16177 CCTAAAGCAGTGGAATTAGTAACTTAAGCTTGCACTACGGGATCGCTGCTTCTGAGCATC Gene GeneID:100300409|BTBD7:XM_002696820:601_cdna Constitutive 0 NULL GeneID:100300409 21 GENE BTBD7 NULL BTB (POZ) domain containing 7 EMBV3_12593 TCCTTGTCACTTCTGGGGACAGACACCGTTAAGATAGGCCTCAGCAGGGTCATAGCAGAC Gene GeneID:513464|FANCE:XM_002697200:77_cdna Constitutive 0 NULL GeneID:513464 23 GENE FANCE NULL Fanconi anemia, complementation group E EMBV3_10720 TGGGGAAGTGTGGCGGGCTGGAGGGTGCACTTTGGGTTACTGTTTGGCTTGTTGGAAATT Gene GeneID:282873|ACSS1:NM_174746:8_cdna Constitutive 0 NULL GeneID:282873 13 GENE ACSS1 ACAS2L acyl-CoA synthetase short-chain family member 1 EMBV3_43070 TCTCTTCCATCCTCAATCTGTGTGTTCACTGTGTGTTACACTCACTCCCGGTCACACTGC Gene BVV0101_033865 + 0 NULL GK000019.2:51640684-51643809 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00100717 1 XLOC_060959 NonCoding TCONS_00100717 XLOC_060959 NonCoding NonCoding - 19:51641049-51643236 - TSS75093 2187 2 TCONS_00100717_4 80 0.23228166438043 1 0 0 5.05407437482253e-05 0 0 2.25751441628968e-06 0 0 4.3271812937735e-05 0.000105526564404263 0 0 1.1444826528106e-05 3.93593344711863e-06 8.60355148965016e-05 0.000275557567179599 0.000990283393701431 3.03653950300059e-05 0.000149145926015311 0 0 0 0.000210371096978242 5.03377895935178e-05 0.000275961166835023 0.00042451491129553 0 1.07163276521442e-05 2.63516003899452e-05 1.33185374657279e-05 0 XR_228770.1 LOC101908067 PREDICTED: Bos taurus proteasome (prosome, macropain) assembly chaperone 3 pseudogene (LOC101908067), misc_RNA. 0.0 2562 100.00 0.64883401920439 0 noncoding CACTGAACCTGGCCTATGTTCTGGGGGACAGGCTGCACCCCTGCACCTCACCCAGCTATTTTACCAGCCCCAGAAACTGGAGACCTGGGGCTATCACCATACCTGGCCTCCCTCCCGCTTTTTGGGAAGCCCGCTTCCCTGCTCCTGCACAGGTCAGTGCACAGGTTGATTCATGATGGGTAACTGTGCTTTGAGAAGGTCCATCAATGCAGACAGAGCATGAAAGCATCATGCCCCCGCCCACGCCGGAGCCCCGGTGAGGCCCTGGTCCTCACAGAAGGATGACTTGGCTGTGTCCATCTGGGCTGCACAACAGTGGCTCTGTCATCACCTGCATCAAGACGTGTCCCAGTTGCCCTTGGTTTTGACCAGGGAGTTCAAATTGAACCACAGTAAGGCTCAACCATCACCAGCAGCTCAGATCCTGGCTGTTCTGCATCTGGTCTGTTCTCCCCTTGGTTCCAGTAGTCTCAACTATTTACCACATGCTATGAGGCCAAGTGGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTGTGCTGCAGTCCATGGGGTCGCTAGGAGTTGGACACGACTGAGTGACTTCACTTTCACTTTTCACTTTCACGCATTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGTGGGCTTCCATCTATGGGGTCACACAGAGTCGGACACGACTGATGTGACTTAGCAGCAGCAGCAGCATGAGGCCAAGCTCCCTCCAAAGTGTCACCAAGTATATCTTCATTCTGTTAGCTGAAAAAACTATAAAGTCCCCAAACTTAGGTATCTAAACTCAGATTTCATGAGTGCCTCTGAAATCGAGATGTGATACAAAGATCCCTTGTCTCAGGCCCCAAATTGTGGTCTGTAAAACAGTCATGGCAATCACAAAAACGTGGTCAGATTGGGCAGGAGACATGAGGCAGTTCCCACCGGTTCCCAGAGAGCAGAGCAGACCTGTGATGCTTATTATGAGCCAGGCCTGCTGCTCAGCAGGCCAGCACCCAGGCCAGAACACGGAAGTGGGCTGGAGGCTGCAGACACATCATTCACGGCCTTTTGTTTTGGGAGGCCCAGCTCCAGTAAAGTACCCCCCAGGAGGTACAACCACTTCCTCCTGATTCTTGCTCTACTGGCACTGGCGGAGGGGCACAGAGAACCTGATCTTGACCTTCCGAAATTCATATTCTAGAAGGAATACTGCATAGGATATGAGAACACATGCCCTCAGGAGCAAGGTGTCAACAAATGCAAACTCTCTAAAGTACAAAAACATACTTTTTCTGTTTTACCATTTTTAAAACCAAGATGTTACTATAGCCAACGTGTACATTTAATGTAGCAGTGTCTCCCTCCTGCCAAGTTATTAAATCGATGATGAGTCTTAGTGGGGGTGGCATTTCATAAAAGGAAGTGAACACAAATGAAGAGAGTGTCGACGGGGTTGGGGGTTGGGCTTTGAGCCTTTGAGGGCAAGGCGCTGCTCCGTCCAGAATTGCGTCGCCGGACAGAAGCTAACATTCCGGCCACGCATGTTATTTTAAATGCTCTGAAGCCACATTAAAGAAAAAGAAATATGAAATTTTAATACTTTCACTTAACCCAACAAAATATTCCAACGTATCCATACAAAAAGTCATCGAGGAAATATCGTACACTTCTCTTCCATCCTCAATCTGTGTGTTCACTGTGTGTTACACTCACTCCGGGTCACACTGCCCGGTCGCATTGTAGAGCTCGGTGATAGTGGCCGCTAGCCAACCCCGTGGCGGACGGCACAGGTTTACCCGGTCGCCTGAAAGCTTCCCGGAGGCCGCTTCGTGGGAGGCAGCCTGTAGGAAGACAGGGAGGTGCCCACAGTGGACGGTGCCGGACCGGAGCCTCTCACCAGGCGAGTGGCCCCATTCCGGGCACAGCCCCGGTGGGCGTTGCTGGCTCCTCCATTGCATTCCGCGTGGGGCCGTCCCCGGCCCCCCGCGCGCTGCCCCTGCACCGCGCTCTGCCGCCACCAAGTAGCGCCATGGCCACTCAGGGAGGCTACCCCGGCAACGCCCGCACAAGACACCAGCCGTCACGGCAGGAACCGCACGGGCCTCACGCGCGCCGGAAGC TCONS_00094417 . 3' 165 TCONS_00094417 . 3' 2351 EMBV3_37948 AGAGCAGATTGAAAAGGAGCGGCTGGAGGAAGAGAAAAAGGCTACAGGGCGCTTACAGCA Gene GeneID:617350|CCDC19:NM_001038219:341_cdna Constitutive 0 NULL GeneID:617350 3 GENE CCDC19 MGC134208 coiled-coil domain containing 19 EMBV3_12226 GTGTGGTAAGATGTTCAGCAGTAGACCAACCCTCATCAGTCATCAGTTCATTCATACTGG Gene GeneID:100139360|ZNF813:XM_002695323:21_cdna Constitutive 0 NULL GeneID:100139360 18 GENE ZNF813 NULL zinc finger protein 813 EMBV3_00482 TGGATTCGGAAGCAACACGGCCGGAATGGTATGACTTTTACTTGATCAGCCAGATGGCCT Gene GeneID:509545|PIWIL4:XM_002692961:88_cdna Constitutive 0 NULL GeneID:509545 15 GENE PIWIL4 NULL piwi-like 4 (Drosophila) EMBV3_20101 AATATAGGACAAATCAGGACACAGTGACCACGAGGAAGGGGAGGGTACTGAGGAGCTGCT Gene BVV0102_155790 + 0 NULL GK000021.2:14643407-14689962 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122745 1 XLOC_074300 NonCoding TCONS_00122745 XLOC_074300 NonCoding NonCoding - 21:14648664-14648890 - TSS91504 226 1 0 0 0 0 0 0 0 0 0 0.000698242078236726 0 0 0 1.26959264496913e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0301734420442483 0.779674140486304 0.0176884251126778 0.731467622664237 GGGCTGTCTCATGACCAGCAGAGTCATTAAGGGGTGGGGGAATGTAGGACAAATCAGGACACAGTGACCACGAGGAAGGGGAGGGTACTGAGGAGCTGCTTGTAGTCAGTGCTGCCCCGTGGGCTCACAGGAGGTTTCCATTGAATATCCAGACAAACGATTTCAAGCGTGAATGATTAATTAGTCAATTGACATTCATCATTGAGAAAAACCAATAAAACAGAAG TCONS_00118682 . 5' 41073 TCONS_00118682 . 5' 41073 EMBV3_08731 GACCCTGCTGGCTGCAGAATTTCTGAAACAGGCAGTTAACAAGATCAAAGAGATCGCAGT Variant GeneID:514355|CCT7:NM_001046171:10_cdna 336^407 1 EMBV3_07920 GeneID:514355 11 GENE CCT7 CCT-ETA MGC133783 TCP-1-ETA chaperonin containing TCP1, subunit 7 (eta) EMBV3_38302 GCCTTCGTCAACCAGTACCGCGACGACAAGATCTGGAGCAGCTATACCGAGTACATCTTC Gene GeneID:539881|KCTD8:XM_002688234:32_cdna UTR3_Alt 2 NULL GeneID:539881 6 GENE KCTD8 NULL potassium channel tetramerisation domain containing 8 EMBV3_09826 GAGAGTTGTCCGAAGCGCCAAGGATAAAAGCTATGGGAAGATAAAGAAGGGAAGAAGAAG Variant GeneID:534882|EIF3C:NM_001034618:365_cdna 256^445 1 EMBV3_35416 GeneID:534882 25 GENE EIF3C EIF3CL EIF3S8 MGC127304 eIF3-p110 eukaryotic translation initiation factor 3, subunit C EMBV3_26497 CAAAAGATAACCCCGATGTCCCCATGGACTGGAAAGCGCTCCCCGGAAGACATTGAGGAT Gene GeneID:783331|EFCAB8:XR_083834:1664_cdna Constitutive 0 NULL GeneID:783331 13 PSEUDO EFCAB8 NULL EF-hand calcium binding domain 8 EMBV3_00712 GCTACAAGGGCTCATGTGACTGGAATGAGGTGGTTCTACTTGACTGTTCCAAAGAGCAGC Gene GeneID:536240|LOC536240:XM_002696696:73_cdna Constitutive 0 NULL GeneID:536240 21 GENE LOC536240 NULL similar to HECT domain containing 1 EMBV3_38346 CTGGGGAAAAATGCCACCCTCTCATTGTCTGATGATGTGTCCCCTGCTCTAACTTGTCAT Gene GeneID:326577|SLC1A4:NM_001081577:20_cdna UTR3_Alt 2 NULL GeneID:326577 11 GENE SLC1A4 ASCT1 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 EMBV3_40833 GCTTCCACATCCATTCACACACCATCAACAATTTGAAAGGACCATCCAGACCCCCGTAGG Gene GeneID:505324|UTP14A:NM_001034241:5_cdna Constitutive 0 NULL GeneID:505324 X GENE UTP14A MGC127594 UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) EMBV3_37958 GTTCTGTGGGCCGTGCTGGAGAACTTGTATTTTCTTCTCTCTGTATTGGGGAGTCACTGG Gene BVV0101_018181 + 0 NULL GK000022.2:57951508-58037190 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32486 CTTTTAATTGACCACTGTAACAGCCACCCTCCAAGACACTCCCCAGCACACAGACCGCAA Gene GeneID:533985|RHBDD1:NM_001077995:130_cdna Constitutive 0 NULL GeneID:533985 2 GENE RHBDD1 NULL rhomboid domain containing 1 EMBV3_35493 AAAACCCTCGGACCCAGAGCCTTTAAGTGACTAAGGAATACCGTGAACAGCGATCGAAGG Gene GeneID:782315|IQGAP2:XM_002690436:171_cdna Constitutive 0 NULL GeneID:782315 10 GENE IQGAP2 NULL IQ motif containing GTPase activating protein 2 EMBV3_42092 TGGGCTGGCAGGAAGGCTGGCTGGCCCATAATTTCGCACATGTTGAGTTTACAGAGTTTA Gene BVT0102_334838 + 1 EMBV3_39354 GK000026.2:34990387-35006214 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150910 TCONS_00150908 TCONS_00150906 TCONS_00150905 TCONS_00150907 TCONS_00150904 1 XLOC_091973 Coding TCONS_00150910 XLOC_091973 Coding Coding TDRD1 26:34935823-34991452 j TSS112925 4726 1 TCONS_00150910_6 1185 0.0363944138806602 26 0.915510174732149 0.00418264795172264 0.00215157644618367 0.00268511086084057 0.00230992466638922 0.00289947866054518 0.00166842200599861 0.003004723730367 0.00207694113120945 0.0046345362294754 0.000101956444285508 4.77852090927499e-05 6.21782818899828e-13 0.000553873787884836 2.14487285646465e-17 0.001218389841392 0.00514546814190924 0.00141572187994935 0.00389367860007505 0.00326431465360426 0.00331977719860676 0.000772375268807554 0.00118605580691456 0.00144349247328236 0.0030464339062144 0.00739163443286466 0.00454019508958366 0.00380622816093857 0.00029084366210427 0.000176677450282831 0.000412179203011394 XM_002698529.2 LOC536516 PREDICTED: Bos taurus tudor domain-containing protein 1-like (LOC536516), mRNA. 0.0 8390 100.00 0.984130342784596 XM_005269978.1 TDRD1 PREDICTED: Homo sapiens tudor domain containing 1 (TDRD1), 0.0 4105 83.17 0.830512060939484 TCONS_00150910_6 sp|Q9BXT4|TDRD1_HUMAN TDRD1_HUMAN Tudor domain-containing protein 1; 0.0 1941 79.42 0.991561181434599 4 coding 1 1 1 1 0.129536331318771 0.448792853661156 -0.00675289684750024 0.883634137322704 AGGGTGCGCAACTGGGCGGCAGGGCTCCTGGCACGGGCAGACGCCACCACCACTACGAGGCTTCAGAGACGGACTTCTGTGAATGTTAAACTGCTGCTTAATATGATGTCAAGAAATATTTTGGCGGCATCTACCTGTAAAATGACAGAGCCATTTAATTTTGAGAAAAATGAAAGCAAGCTTCCATCACACGAGTCTTTGAGAAGTCCTGGAGGACATCCTAACCATCCTAATTTCAGGTTGAAAAGCCCAGAGAATGGAAATAAAAAGAACAATTTTTTGCTTTGTGAGCAAACCAAACAGTTTTTGGCTAGCCAGGAAGACAGTTCACTGTCTTCACACCCTAACGGTGTCAATGGAGAAATGGCTGGATCCAAGGAAGACAGGAAGACATTGCCAACAGGTAACGCTGTGTCACCATTAAATGTTGGAAATAATTCACCACCCAAAGAAGTAAATAGTAAGCCTAGCAATCATGTGCCTCCTGCAAAGTCAAAGAAAGTACACAAGTTGGTTGAGAATTCCTTGTCTATAAATAATCCAGCACTCTTCAACTCCTTAGGACCTCCTCTTCGATCGACAACTTGCCATCGCTGCGGTCTGTTCGGGTCGCTGAGGTGCTCACAGTGCAAGCAGACGTACTACTGCTCCAACATATGCCAGAGAAGGGACTGGGCAGCCCACAAAATTGTGTGCAAACCTGTCCAGCAAAATTTCCACAAACTTGAAGATTATAAATCACCTTTTGAAACAAAGAACATGGAAGTGAAAGATGAGAGTGACTCTCCTCTCAGAGTTATTAAAGAAAGAGCTATTTGTGCTGATAAAATAATGTTTTCTGATTTGAGAAGCCTGCAACTCAGGAAGACCATGGAAATAAAGGGTACAGTTACTGAATTCAAACACCCAGGTGACTTCTATGTGCAGTTATATTCTTCAGAAGTTTTAGAATGCATGAACCAACTGTCTGCAAGCTTAAAGGAAACTTACGCAAATAAGGCACATGAAGAAGATCATGTTCCTGTAAAGGGGGAGATTTGTGTTGCCAAGTACACTGTTGATCAGACCTGGAACAGAGTAATAATTCAGGATGTTGATCTGCTGCAGAAGGTGGCACAAGTCTTATATATTGATTATGGAAATGAAGAAGTAATCCCAATAAACAGAATTCACCAACTAAACAGGAAAATTGACTTGTTTCCTCCTTGTGCCATAAGATGCTCTGTGGCCAGTGTTATCCCGGCAGAGGGGAATTGGAGCAGTGATTGTATCAAAACTATTAAATTGCTGTTAATGGAGCAGTACTGCTCTTTAAAAATAGTGGACATCGTAAAAGAGGAAGAAGGCGTTACTTTTGCTGTGGATGTTATGATGACAAGTTCAGGAAAATTCTTAGACCATGTGCTCATAGAAATGGGATATGGTTTGAAACCTAAGGGACAGAATTCTAAGAAGCAAAGTACAGATTCAAGTGATCTTAAAGATGTCAGAAAAATGATGGCTGAAAATAAAATTGTCGTGGACAGAAGTGACCTCATCCCCAAAGTGTTGACTCTGAATGTAGGTGATGAGTTTTGTGGTGTGGTTGCCCATGTTCAGACTCCAGAAGACTTCTTTTGTCAACAGCTACAAAGTGGGCGTAAGCTTGCTGAGCTTCAGAGGTCGCTGGGCGAGTACTGCAGCCAGGTACCTCCGCGCTCGGATTTCTATCCCACCATTGGTGACATCTGCTGTGCTCAGTTCTCCGAGGATGACCAGTGGTACCGTGCCTCTGTTCTGGCTTACGCTTCTGAGGAGTCTGTACTGGTCGGATATGTAGACTATGGAAACTTTGAGATCCTTAGCTTGACAAGACTTTGCCCCATAACTCCCAAGTTGCTGGAATTGCCAATGCAAGCTATAAAGTGTGTGCTGGCAGGAGTAAAGCCATCATTAGGAATTTGGACTCCAGAAGCTGTTTGTCTGATGAAGAAAATTGTACAGAACAAAATGATCACAGTGAACGTGGTGGACAAGTTGGAAAACAGTTCCCTGGTGGAACTTACAGATCGATCTGTGACACCCCACATCAGTGTCACCAAAGCGCTCCTCAATGCAGGCTTTGCCGTGGAGGACAAGGGGCTTGTGACAGATAAGCCCAGTGACGTGAAAGAAGCCAGTGTTCCCTTGGGTATGGAAACAAAAGTCAATCCACTGGAGTGGACATGGGTTGAACTTGCTGTTGATCAAACACTGGATGTTGTGGTCTGTGTGATTGATAGTCCTGGAGAATTTTACTGCCATGTGCTTAAAGGGGATGGTGCCCTAAAGGAACTCAGTGATTTGAACAACTTACTAGCAGAATATTGCCAGCAGAAGTTGCCTAATGATTTTAAGGCAGAAATAGGGCAACCTTGTTGTGCTTTCTTTGTAGGTGACAATAATTGGTATCGGGCTTTGGTCAAGGAAATCTTACCAAACGGAAACTTTAAAGTACATTTTGTGGATTATGGAAACATTGAAGAAGTTACTGCAGATGAACTTCAAATGATCCCATCCAAGTTTCTAAAACTTCCATTTCAAGGGATACAGTGCTGGTTAGTAGGTATACAGCCTAGAAACAAACACTGGAGTAAAGAAGCCATAGCAAGATTTCAGACGTGTGTTGCCAGGATAAAACTCCAAGCCCAAGTGGTTGAAATCACTGAAAACGGAGTGGGGATTGAACTCACTGACCTTTCCACTTCTTATCCCAGAATCATTAGCGATATTCTGATTGATGAACATCTGGTTTTAAAAGCTGGTTCACCACATACAGACTTAGCGAAAACCAGACCTGTTGATAAGCATGACCTTCAGATTGATACCCCGGGGCTTCAAGCCATCTCTTCAGCTGATCAGTGGAGTACAATAGAATTGCCAGTTAATAAAACTGTACAAGCATGCATTTTAGAAATCACAAATGCAAACTTGTTTTATGCTCTACCAAATGAAATAGCAGAAGATCAGGAAAAACTGAGCGTATTGACGGCCGAATTGTTAGAATATTGCAATGCTCAGAAAAGCCGATCACCCTATACACCGAAAATTGGAGATGCGTGTTGTGCCAGATATACAAGCGATGATTGCTGGTACCGTGCCATCGTGCTGGGGACATCAGATGCCGACGTGAGAGTGCTCTATGTGGACTATGGAAACATCGAAACCCTGCCTCTCTGCAGAGTGCAGCCCATCTCTGCCAGGCACCTGGAGCTTCCTTTCCAAATTATCAAGTGTTCCCTTGACGGACTAATGGAATTGAATGGAAGATGTTCTCACCTAATGATAGAGCTACTGAAGAATTTCATGTTGAATCAGAATGTAATGATTTCTGTAAAAGGAGTTATCAAGAATGTCCACACGGTGTCAGTTGAGAAGTGTTCCGAGAATGGTATTATCAATATAGCTGATAAGCTGGTGATGTATGGTCTGGCAAAAAACATCACATCTAAAAAGCCAGCTGCTGTAAATACAGAAACGGCAGACAGGATGAACTGCTGCTGCACGAAGCTACAGAAACAAGTTGAAAAGCATGAGCAAATTCTTCTCTTCCTTTTAAACAATCCAACCAATCAAAATAAATTTATTGAAATGAAAAAATTGTTAAAAAATACAGCCTCTCTTGAAGATCAACACTTATGAGACAGGAAGTAGCGAAGGCTAGATTTAGGAGAGAAAGTACTGCATCTTGTGTTTTTGTTTGTTGGAAACTTTTTCTTTAATGACCTTTTATGTCTGCATTTTTTGTTTGCTTACCATTCTTCTGTCTAGGTTGGGTAGGTTTTTTTTTTCCCCCCTCTAAATGCATCCTCTCAGTCTCGCATTAAAGATACACAGTAAGTACATGGGAGCATCGGGAAGGGATACATAGGGGCTGTCTAGTCTACATAGAGCTTTTTATTACTTAAAGGTGCTGAAGAAAATATGGCTCCAGGTTAATACTGGGTCAGTTTAGTTGTTAGATACACAAGTTGTATTTTTTGGACTTTTCTCTGTATGTTTGATGTGTTTCATAATAAAATACACCCTGCTCTCCCTGTCACAACCTGTCTCTTCCACATAATAAAAGTTCTTTGGTTTGTTGTTGCTCGGGTCTCTGCCCTTCTTTTCCTGTCTACTCTGAGGTCATCAGTTTCTCTCTGTCTGTCCTCACTGAGATCACTTTTCTTTCAGCCCGTGGGCACAGTGTGCCCTTGGGCTCTCGCCCACTCTGACTGGGAAGGCAGTTTCTGCTCCTGCCATCCGTAGGTACCTTTCCAAATCTGTGGCCACTTGGATTTTTAGTGTAGTGGAATTTACATTTTCTGAAGCACAGATTCCTGGAGAACAGTTAACAGCTTAATGTAAAAAGCCAAGTTAGAGTATATATTTTTCTTGAAGCACATAAAGACATCTTAAACTCTGTAAACTCAACATGTGCGAAATTATGGGCCAGCCAGCCTTCCTGCCAGCCCATAAGTTTCTGTTTGGGAATTTTTTCACGATTTAAGTATCAGACTGTGAAAGCCTAAGATGTTGTCACCAACTCAAAGAAGAAACTTGACTTTTTGTTTGTTTGTTCTTTTAAAATGTACCTTTGCTGGTAATATGTGTTAGCAGGATTAAATGGAGTTTCACCTCATGTAAAAAGTTGTTCAAACATTGATATGCTTCTATGAGATAAAAATTTAAGCTGCTGTGCCCAATAAAATCCTTTTACTTCACAGCC EMBV3_12587 CCAGCTCCTCCTGCAGAGTCCCCAGGTGGAAGAGATCGTGCAGCTGGTGAATGCCTACTT Gene GeneID:541100|PLEKHH3:XM_002695995:380_cdna Constitutive 0 NULL GeneID:541100 19 GENE PLEKHH3 NULL pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 EMBV3_12630 GGGTTGCTAGCTAAACGGAAGGATTCACACTAAGATTCCGATACGCGGCTGTCCTATAGC Gene BVV0102_292278 - 1 EMBV3_39584 GK000030.2:96269468-96362879 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245235 TCONS_00245232 TCONS_00245234 TCONS_00245233 1 XLOC_150663 NonCoding TCONS_00245232 XLOC_150663 NonCoding NonCoding - X:96285037-96362868 - TSS184120 1545 3 TCONS_00245232_2 71 0.0828478964401295 4 0.980200436849544 0 0 7.75582714259268e-186 3.81851858442227e-205 0 0 0 0 0 0 4.45158313997219e-06 0 0 0 0 0 0 0 2.48515019858147e-321 0.00045564920206108 6.39919387624576e-06 0 0 0 4.58967599653823e-139 0.000158462759939106 4.83065844934956e-06 0 0 0.000648197471217943 XR_240581.1 LOC101905792 PREDICTED: Bos taurus uncharacterized LOC101905792 (LOC101905792), 3e-09 68.0 81.43 0.0446601941747573 NM_031407.6 HUWE1 Homo sapiens HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase (HUWE1), mRNA. 2e-62 244 72.77 0.253074433656958 0 noncoding 0 0 0 0 -0.00731495498882567 0.94355380726398 0.011840827311006 0.796850171966459 GGTGGTCTGTCAGTAGTAACTGTCATGCGTAGTGCTTGTGCCCTCCACCCTAAGCCACTTGCACCATGTGAAACTGTCCCATTGGCGGGGATGTGGGACACGGTGAGGAGACCTTGATCCGTCATCACAGGGAGCCCAAAGATGGCTCAGGCCCTCGAAGAGACTGGCAAAGGGGCTCAGAAGGTAGGAACCCAGAGTCTAGCAAAGGGGCTTGGCAGGGGGCAAGTTCCCCTTTTATTTCTGCCACTGCCAAGTGAGGAAGAAGAGTCGCCTGCTCTGGAACCAAGGACTGGACGGTGATCTACAGGCGTCACCCATTCTAAGCAAGTCAACGGATTAAATATGATTTTTATTAACTCAGTCTTCTTTTTTTAGAGGGGTTGCTAGCTAAACGGAAGGATTCACACTAAGATTCCGATACGCGGCTGTCCTATAGTTCTGATCGAGTATGGGAAGATAAGACTCAGCGAGAAGGAGGGCAGCAGGGGCGCGGAGATGAACAGGTCTGGCTTTGCCAATACCCACCCACTCAGCACATCTTCCCTTCCGGAGCGGTTCGCGGCATCTGCGCATGCTCCTTCCGCCCATGTCAGGCCCTCCGAGGGGTCGCGCTGTGCTCTGTGGAGGTGGGGTCTGCGCATGCGCGTCCTGCTCGCCCCGTTCTGCCGGAGGGGCGGGAGAGTCAGTTGTGGAACTGGCCAGTGCGATTGAGGGGACAACTGCGGCCAGACCCATAGGAAGTGACTGTTAGGAGATGTGGACAAAGCGGCGTGCGACAACAACAGGTCACAGAGAGAAGAGGAGGGGTGCGGCCGCCCGGGGCAGTTTAGGCAGGCGCAGAGTCCTCGACGGTAGCGCTTGAGTAAAGCAGGACTTCACATTCAAGGCAGTCTGGCTCCAGAGTCTGCACTCCTCTAAGAGGACAACCTACAGATGTACACAATCTACAATCTGGGGCGAAGACTGCAGCCATGTACTGCCCGTCATCCACAACACACAGTGAGGTGTCGCTCCAGGACCTTGCTTCAGACATGCTGGAACCATCAAAGTTCTTAGATCAACTTTAAGTGCTGGATGGAGTAAAAAAAACCCACAAGAGACTATTTGTCGATCTGTGAACAGATCTGACAAGAAAATGCAAAACAAAATCAAAAAGGATGCAAAGACTGTTCTGGGGAGCCAGTCAAATTATTTATTAAAATTTGTTAGAAGTAAACTAAAACATTAATAAATGAAATCAAAATTTTAAACTGAGCTCCAGACTTGAAACTGTTACAAAGGCTCAGGATATAGAACCTTCGGTTGGGTTGAGAGAATTCTCTTAAAACCTGCTGGTTTGTTCCCCTAGAGCAAGGCGGTGCTTTGTCCTTAGCTACAATCTCTAACACCATCACCACTCCCAAGTGTAGATGCCATTCTGAAAAAGATCCCCTCAGTTCCTGATGACCCTGAAGGAGGAGGATGCACCAGTGTGGTAACAAAAATGGCTTTCTGGAGAGTCCATTTGGATTTGTTCTCCAGCCATCTAGAATGTGTTCAAGAGGT TCONS_00247759 r 5' 0 TCONS_00247737 TCONS_00247738 TCONS_00247739 r 5' 15571 EMBV3_29882 GCCAACCCGGGACCACATTTTGAGAATCATCGTGTTTATACCTCTCCATACCTGCTGACC Gene GeneID:281861|IL2RA:NM_174358:7_cdna UTR3_Alt 2 NULL GeneID:281861 13 GENE IL2RA CD25 MGC155054 interleukin 2 receptor, alpha EMBV3_06344 CATCGTCAATGAACCTTGGCTGTTCTCATTGGTCTGGTGCCACAGTATTCACTCCGTGAC Gene GeneID:524642|GDPD4:XM_002699072:1_cdna Constitutive 0 NULL GeneID:524642 29 GENE GDPD4 NULL glycerophosphodiester phosphodiesterase domain containing 4 EMBV3_35562 AAGAGTTGGCACCTTATGGCCTGGTGTCTTTACTCTTGAGAGAACCTATTGCTAGTCCCC Gene GeneID:506848|SIKE1:NM_001075281:29_cdna UTR3_Alt 3 NULL GeneID:506848 3 GENE SIKE1 MGC142423 SIKE suppressor of IKBKE 1 EMBV3_34666 TGAGTGTTTTCATTCATGTATCACCAAGCAGCAATTATGCTTAATGATGAAAATCTAGTG Gene BVV0101_049823 + 0 NULL GK000007.2:92873367-93020811 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40089 ATGAGCTCTTCTCCAGACTTAGTGACTGTGATACTCTTCCTGCTGGGACAAAGCCGTGGA Gene GeneID:786881|LOC786881:XM_002690573:246_cdna Constitutive 0 NULL GeneID:786881 10 GENE LOC786881 NULL similar to hCG1812167 EMBV3_22111 TGCGCACGCCCGGTTTTTTATCGGCACATCAGTCTCCACGTTCTCCTTTCGAATTCACGA Gene GeneID:404083|POFUT2:NM_205782:11_cdna Constitutive 0 NULL GeneID:404083 1 GENE POFUT2 FUT13 protein O-fucosyltransferase 2 EMBV3_24948 TGGTCACTCTAACTAGCTGGACAAGTGCAAGTCCCATCAAAAGGGGCAGCCAGTACTCAG Gene BVT0102_153837 - 0 NULL GK000030.2:108907653-109949356 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08719 TCTTCTCCAGCGGCTACGCAGGCATCTCAGGAGCTGTAGGATGGAGAGCAGTCTTTAAAT Gene GeneID:532856|ANKRD11:XM_002694765:539_cdna Constitutive 0 NULL GeneID:532856 18 GENE ANKRD11 NULL ankyrin repeat domain 11 EMBV3_20372 GTGGAATCTCCATACAGCTTTACATAGTGGTTGCAGGACAGGGCTTCTGTTTTTCATGAT Gene BVT0102_276431 - 1 EMBV3_34140 GK000026.2:18787377-18858543 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151682 TCONS_00151681 TCONS_00151683 1 XLOC_092162 NonCoding TCONS_00151681 XLOC_092162 NonCoding NonCoding - 26:18850267-18858289 - TSS113324 2508 5 TCONS_00151681_5 66 0.621212121212121 3 0.687694801146989 8.70164245516677e-08 0.000382480961405288 2.78073344154164e-08 2.35709466088014e-10 0.000481212828694365 0.00148607785227034 2.9916730623177e-05 1.47839083897805e-09 0.00111835926451066 8.88593803977143e-05 1.82381652492201e-06 1.14524305191291e-97 8.791591562423e-06 3.18814656859622e-05 1.29262442553871e-207 0.000126351607927159 0 0 9.63193615744958e-08 3.0781969051563e-05 0.00114338897373366 0 0 0 0.00100910874915794 0.000216850176918086 6.42637769529572e-17 1.54657400979938e-08 3.86786431783576e-06 0 XR_229924.1 LOC101905123 PREDICTED: Bos taurus uncharacterized LOC101905123 (LOC101905123), 0.0 1326 100.00 0.292663476874003 NR_038877.1 LOC286189 Homo sapiens uncharacterized LOC286189 (LOC286189), non-coding RNA. 8e-45 187 76.75 0.105661881977671 0 noncoding 0 0 0 0 -1.04280238687904 0.104924074262615 0.020422496755842 0.669718788152622 CACTACCGAGGCCTCCCAGGGCTTCCAGACTAGGAGGAAAGAGAGGTAGGACCGTTCTGGGACAAGACATTCCAGCTTGCCAAGGCTGACGGTCCTAGACTCGTTCGCGGGCCCCTAGGTTGGGAAGACAAAGGATTCTAAGAGTGGCCAGTGAAGTAGAAGGAGACCTGAAGGAGAGTGGTATCCTGGAACCAAGAAGTGGAGTGGGAGGCAAGTTTCCGTAAGAATTCACAGCTACCCCAAGAGAAACTGCCGATACTGGGATTCTTAGCTGCAGTGCATTCCTGTCTTGATGACAGCCACCAAGCTGGAAGCCCGGCAGAATTCCCAAAGAACCCCTGTTCTGAGAATGGTTCCAAAGGCCCTCTGCAGGAGCAATTATCAAAGGACTGACTGCAGGGTCTCACCTCCAAACTGGCAACAAATTCACCAATTACTTCCAACCATAGCCAACTGAGGGGAAGACTGCAAGGCTTCTAAGTGATGGAAGTTCTTTAGAGAAGTAAATAGGCAGGAGCATAAAGGGTAATGGGTGCTTATAAAGCATCATTAATCATGAGAGCCAAAAGGAGTTCAATCCAATTTCACTGGCAGAAACCTTTGTTCAAAAGAAACCTTGCATAAAAGTCAGAGACATAAAACAAATCAGAGAAAGTGGATTTGCATGAATGGGGGGAAGACTTACCTACTTTCCCACCCTCTCACTCCCTACAAAAACCCCCAACACACCCCTCTCCAGACCTCCCAGGACTCAGTAGAATATGGGGTCTATTTTTAATCGTGAAAGTAACACATGCCTATGATTTTAAAAATCCAAACATACAGCTGCTAAGTCGCTTCAGTCGTGTCCAACTCTGTGCAACCCCATAGATGGCAGGCTACCAGGCTCCCACATCCCTGCGATTCTCCAGACAAGAACACTGGAGTAGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCTTCGCAACCCCATGGACTGCAGCCCACCAGGCTTCTCCGTCCATGGGATTTTCCAAACATACAGAAAGGCATATGATAAAAAGCAAGAGTCCCCTATCTACTGTATCCTACATGTTCCTACCTTCAAGTCATTTCTCCCCTGGAAGAAATGACTTTTCACTCTTTAGCTGTTTCTGCTTTGAATTCTGATTTTTCAGAAGTTTTCTTTACATTGCTAAATGATATGCCTGTAGTTCTATTTCTTGTTTTATTAACTTTAGAAACCTTTTTCCTGTTTTCTGCTGTGGCAACAGAGAACTTAACTCACCCTGCCACCCTCAAATACCAATATAATTACAGCACTATTTGAATTTAACTTTTATTTTTATCAAACTAATACACATGTAGTTAGTTTAAAATTCCAGCCAGGGACAAGGGTTTATCATGAAAAACAGAAGCCCTGTCCTGCAACCACTATGTAAAGCTGTATGGAGATTCCACAAAAGACTAAAAATAGAACTACTGTATAATTCAGCAATCACACTCCTGGGTATACATCTGAAGAAAACAAAACATTAATTTGAAAGTATACATGCACTCCAATGTTCATAGCAGCATTATTTAGAAGATCCAAGATACAGAACCAACCTAAGTGCCCATCAACAGATGAATGGATAAAAAAGATGTGGCTTATATACACAATGAAATAGGAATACTGCTCAGCCATAAAAAAGAAAGGAAGTTTTGCCATAGCTAGAACTAGAGGGTACTGCTGCTGCTAAGTCACTTCAGTCGTGTCCAACTCTGTGCGAACCCATAGACGGCAGCCTACCAGCCTCCCCCGTCCCTGGGATTCTCCAGACAAGAACACTGGAGTGGGCTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACCCTCAGCGACCCCATGGACTTCAGCCTTCCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCTGAGAGGGTACTATGCTTAGTGAAATAAGTCAGACAGAGAAAGACAAATACTGTGTGTTATCATCTAAAAACTAAAATAAATGACTGAATATAACAAAACAGAAATCAACTTACAGATATAGAGAACAAACCAGTGGTTATCAATGGGGAGAGGAAAGGGGTAAGGGCATAATAAACAGAGAGGATTAAGAGTTTTTCTATACAAACTACCACATATAAAATAAGAAAGCTACAAGGATATACTGTATAGCACAAGGAAGGAATATAGTCGATATTTTATAAGAAATGTAAGTGGAGTGTAATCTATACAGTTTTTGAATCACTGTTGTTCACCTGAAACTATATTATTAATCAACTAGACCTCAATTAAAAAAGTTGTCTTCTTGTAAAAAAATGAAATAAATAAGCTACAAGGATATATTGTACAACACAAGGAATTAGCCAATATTTCATAAAAATTTTAAATGGGGTATAATCTAAAATTTTTTGAGT TCONS_00150328 r 5' 5387 TCONS_00150328 r 3' 219 EMBV3_25228 TGGTGGGGCTGTTTGAAGACACGAACCTGTGCGCCATCCACGCCAAGCGCGTGACCATCA Gene GeneID:788077|LOC788077:XM_002686057:286_cdna Constitutive 0 NULL GeneID:788077 3 GENE LOC788077 NULL similar to Hist1h3e protein EMBV3_15234 ATCTTCACCGAGCGGGAGATGAAATACCTGGATGCTAACGAGGCAGAACCGGTGTTCGAT Gene GeneID:404084|SLC4A2:XM_002687048:153_cdna Constitutive 0 NULL GeneID:404084 4 GENE SLC4A2 NULL solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1) EMBV3_13763 ACAGCCCTTGCTGCTTTTCTTTCCTACTGCCCTGGAATGGGTGTTGCCCTGAGGATGTAT Gene GeneID:282144|ATP1A1:NM_001076798:11_cdna Constitutive 0 NULL GeneID:282144 3 GENE ATP1A1 NULL ATPase, Na+/K+ transporting, alpha 1 polypeptide EMBV3_37291 GAAGAAATCTTAGAAGAACAGAGGGTGGAACAGCAGACCAAGCTGGAAGCCGAGAAGCTG Gene GeneID:535447|LSM1:NM_001017952:91_cdna Constitutive 2 NULL GeneID:535447 27 GENE LSM1 MGC134081 LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_05658 GTCTGTGGAGACCTCTGACTCCAACCCCTACATCTACTACAACATGAAGCTCCAAGCCAT Gene GeneID:528040|LOC528040:XM_002688840:156_cdna Constitutive 0 NULL GeneID:528040 7 GENE LOC528040 NULL similar to complement component 3 EMBV3_14823 ACAAATTGTGAAGAAAGTGCCAGCTGCTGTTTGAAAAATGTTCTCCCTCCTCAATCCCTG Gene GeneID:515563|ABHD10:NM_001015606:74_cdna Constitutive 0 NULL GeneID:515563 1 GENE ABHD10 MGC137541 abhydrolase domain containing 10 EMBV3_07499 ACTATTCTGCGAATGAGGAATTCAGACCAGGGGGACTTGACATGCTCATTCTCAACCACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33586 GAAGATCTGTCGTCTTCCGAGATCCTTGATGTGTCGCTTTCCAGGGCTACGGACTTAGGG Gene BVT0102_006486 + 0 NULL GK000012.2:14725631-15164031 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036243 1 XLOC_021111 Coding TCONS_00036243 XLOC_021111 Coding Coding TSC22D1 12:14722211-14846896 j TSS26430 4762 1 TCONS_00036243_3 1054 3 0.961831510057425 0.00164805783145423 0.00163955426675812 0.00175433641742593 0.00196704611980859 0.000845491515127426 0.000237375007309521 0.000419068053193695 0.00028969457525632 0.00104272773139156 0.000590904008907842 0.000720244096630909 0.000326744239754574 6.77571055773472e-05 0.000912585615827623 0.00020186464317484 0.00791476310139013 0.0095039078397286 0.00244230276373677 0.000755076841619829 0.000274386803344438 0.0004089725856725 0.00308905960420322 0.000846963922751208 0.00205481469352973 0.00106281891523704 0.00158313519860681 0.000618161165316251 0.00103073927277035 0.000533642748986413 0.000843835624660263 XM_005213604.1 TSC22D1 PREDICTED: Bos taurus TSC22 domain family, member 1 (TSC22D1), 0.0 8006 100.00 0.931961360772785 NM_183422.3 TSC22D1 Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript 0.0 5292 84.37 0.999790004199916 TCONS_00036243_3 sp|Q15714|T22D1_HUMAN T22D1_HUMAN TSC22 domain family protein 1; 0.0 1395 83.75 0.999051233396584 1 coding 0 0 0 0 0.0389168654598228 0.783295358536963 0.00403514284053406 0.954744201226084 GAGGTGGCTCCGGAGTTGTCCGGAGAAGGTGGGCATTTCTTGGCTTTTCCCACCCCACTCCCCTCGCCTCCCTGCTCCCCTGCCCACCCCCTCCCTCCCGCCCCGCACCCCACGTGAAGCGGAGTATAAAGGGGGTGTGAGGCCAGAGGGGAAAGTGGATGGCGAAGGACTGAAGGGGTACCCCCTTCGGGTCCTCGGCCGCCCCGTTCACCCTCGTCCATCCTCCCTTTCCGAAGCTCGCCCTCGAAGGCAGGAACGGCCGGCGCCTGCGGCTGAGGAGGAGGAGGAGGAGGAGGTGGGGGAATCGCGCCGGGCGGAGCGTCAGGTCCCGTTTTCCTCCTCGGCGTCTTGAATACAAAGATTACGGTGCAGAAGGAAATTGCACTCGCCTTCTCCGCCCCCCGCCCCGGTACCCAACACAATGCACCAGCCGCCCGAGTCCACGGCGGCCGCGGCCGCTGCAGACATGAGTGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGCGGGGGCAGCGCCTCAGCTCTCGGTGCAGCAGGTACCGGCGTCGGTAGTAGTGCCCCATCTGCCGAGGATTTTCCGCCTCCGTCGCTGCTCCAGCCGCCGCCTCCTGCAGCATCTTCTCTGTCGGGACCACAGCCTCCGCCTCCACAAAGCCTGAACCTCCTTTCGCAGGCTCAGCTGCAGGCACAGCCTCTTGCGCCAGGCGGAACGCAGATGAAAAAGAAAAGTGGCTTCCAGATAACGAGCGTGACCCCGGCTCAGATCTCTGCTAGCATCAGCTCGAACAACAGCATCGCAGAGGACACGGAGAGCTACGACGACTTGGATGAGTCTCACACGGAAGATCTGTCGTCTTCCGAGATCCTTGATGTGTCACTTTCCAGGGCTACGGACTTAGGGGAGCCTGAACGCAGCTCCTCGGAAGAGACTCTGAATAACTTCCAGGAAGCCGAGACACCTGGGGCGGTCTCTCCCAACCAGCCCCACCTTCCTCAGCCTCATTTGCCTCACCTTCCACAACAGAACGTTGTGATCAATGGGAATGCTCATCCACACCCCCTCCATCACCACCATCCCATTCATGGCCACCACCTGCACCACGGGCACCACCATCCATCCCATGCCGGGGTGGCCAGTACATCCATCCCTGGAGGGCCGCCCTCAAGCCCAGTGTCCAGAAAACTCTCGGCCGCGGGAAGCTCTGACGGTGTTATGCCAGTTGCACCAACTTCTGCTGTATCATTGAGTGGCTCGCCGGCATCTGTCATGACTAGTGTCCGTGCTCCGAGTACTACCGGCAGCCTAGGTATAAATTCTGTTACGGGCACCAATACGATGAATAACGTTAACGTCACTGCTGTGGGTAGTTTTAATCCTCCTGTGACCAGCAGCATGCTTGGTAACGCTAATATAAGTGTGAGCAGTATCCCCAGTGCTGCTAGTGTGAGTGTCGGGCCTGCAGTGAGCAGCGGGGTTAATGTGAATATCTTGAGTGGCATGGGCAATGGTACGATTGCTTCCTCCGCGGCCTTTAACAGCGCTGCCAATGCAGCAGCGGGCATGACAGTGGGGTCCGTTTCGAGTCAGCAGCAACAGCCAACCGTTAACACGTCCAGGTTCAGAGTCGTGAAGTTGGATTCTACTTCTGAGCCTTTCAAAAAAGGTCGATGGACTTGCACTGAGTTCTATGAAAAAGAAAACGCCGCCGTACCCGCCACCGAAGGGGTGGTCGTAAATAAGGTGGTGGAAAGTGTAAGACAAAACCCGACCGAAGCGACTTCTGAGAGGGAGAGCACGAGTGGGAGCTCTGTGAGCAGCAGCGTCAGCACACTGAGTCACTACACGGAGAGTGTGGGCAGCGGAGAGATGGGCACCCTGGCAGCCCCGCCGGTGCCCCCGACCCTTCCAGGGGTGGCCCTTCCGCAGATGGACTTCAGTAGCGCCGCTCCACAGGGCATTTCAGCAGTTAGCATGCCTCAGAGTATTTCTCAGTCGCAGATCTCGCAGGTACAGTTACCGTCTCAAGAACTGGGCTATCAGCCGAAGCCAGGTCTTCAACCAGTACCTCTGCAAGCCGGTATTCAGCCGTCACCTGTTGGCGTGGTGGGCGTCACTTCGGCTTTAGGTCAGCAGCCTTCCGTCGCCAGCCTGGCTCAACCCCAACTGCCGTATTCCCAGGCGGCTCCCCCAGTGCAAGCTCCCCTGCCAGGGGCGCCACCCCAACAGGTACAATATAGCCAGCCGGCGCCAGCTGTGGGCCCTCCGATGGCCCCAAGCCATGGTACATCAGTGGCTCCGAACCCAGCCTCCGAGTATGTTCAGCCCTCACCGCTTCTCCAAACAGCGGTATCCTCTGGACAGCCCACTTCTGCAGGGGTGGCTGTTGGAGCCACGGTGATTCCTATGGCTCAGCCACAGAGCATCCAGCTCCCAGTGCAGCCCGCGGCAGTGCAAGCACAACCTGCGGGGGCAGCTGGCCAACCTGTTGGCAAGGCTCACACGACAGTAGCTGCTGTACCTCCTGGCAGTCAAATCGCAACTATTGGTCAACAGACAAGCCTACCATCGGCACTGCAGCAGCCCTCCACCCAAGTCACACCTTCAGTTATCCAGCAAGGTGCTCCTCCGTCTTCACAGATAGTGCCACCTGCTCCAGCTGCGATCCTTCATCAGGGAGTTCAGCCCAGCGCTTCAGGCCTTCCTCAACAACTGGTCATTGCACCTCAGAGTACCCTATTACCTGTGCCTCCCCAGCCACAGGGGGTCGAGTCGGTAGCTCCAGGAGTGGTTTCGAAGCAGTTGCCTGCAGTTAGTCCTTTGCCCTCTGCTAGTAGTATTTCTGTTACAAATCAGGTTAGTTCAGCTGGTCCTTCTGGACTGCCTTCTGCCCCGACAAACTTGGTCCCGTCACAGAATATAGCACAAGCCCCTGTCACTCAGAATGGTAATTTGGTTCAAAGTGTCAGTCAGCCTCCCTTGCTAGCATCTAATATAAATTTGCCTTTGGCACAACAGCTACCGCTCAGTTCTGTTCAGTTCTCCGCACAATCATTAGCTCAGGCAATTGGAAGCCAAATCGAAGATGCCAGGCGCCCAGCGGAACCCTCCTTAGTTGGCTTACCTCAGACCATCAGTGGTGACAGTGGGGGAGTGTCAGCAGTTTCAGATGGCAGTAGCAGCAGCCTTGCAGCCTCTGCTTCTCTTTTCCCGTTGAAGGTGCTACCGCTGACGACACCCCTGGTGGATGGCGAGGACGAGAGCTCATCTGGTGCAAGTGTGGTAGCTATTGACAACAAAATCGAGCAAGCTATGGATCTGGTGAAAAGCCATTTGATGTATGCAGTTAGAGAGGAAGTGGAGGTCCTCAAGGAACAGATCAAGGAACTCATAGAGAAAAATTCCCAGCTGGAGCAGGAGAACAATCTGCTGAAGACACTGGCCAGTCCCGAGCAGCTTGCCCAGTTCCAGGCCCAGCTGCAGACTGGCTCGCCCCCTGCCACCACACAGCCACAGGGGACCACACAGCCCCCAGCCCAGCCAGCGTCCCAGGGCTCAGGACCAACCGCGTAGCCATCCGGGCCCCCGAAGAACTGGCTGCTGTGGTCTGAACTGAACAGACCCGAGAAGATGTACTAGGGGAGGGGTCCGCCCCCACCGTCACCCATTTCATTGCTCGCTGCAAAAGAGACGTGAGACTGACACATGCCATTTTCTCTTTTTTCCAGTATTAAACACTCATATGCTTTCGGCTTGAAGAAGTTTCTTAGTTGGGTGAGTTAAAGGTTAATCAGAGAATTAGCATGGATATACTGGGACCTCATGCAGCTTGGCAGGACCGTGAGAAATGGTTTCATTCATTCTGAGGAGCTGTTGTGCCTTTCCACCCCCCCGCCCCTGCTCCCCACCCCCCACCCCCTCCAAGAGTTCTTCCTGCTTGCACAGTAGTGTACTCCATGGGGTTCCGAAGCAGAGGAGCTTGCCGCTGGACTTTCCTCTCCTCCCCGGAGAGGAACTGGAAAGGGAGGTGAAGGTCAAGAGTGAAGCTTAGTCTCACCTAAGATGAGGGGAAAACATAGTCCATTGTACAAACGACGACTGTCACCAGACTCCATTAAAAAAAAATTGGACTGTGCCTCTTTCCGAAACAGCGGATGACACAAAACTATTGGCGTGACTAAATGGTGACAGGTAGCTGGGACCTAAGCTCTCTTACCATGAAGGTTGTTTTGCTTATTGTATATTTGTGTATGTAGTGTAACTATTTTGTACAATAGAGGACTGTAACTACTATTTAGGTTGTACAGATTGCAATTTAGATGTTTCATTGGCAGTCTGAAGAGGTGTGGATTGTCTTTTATATAGCGATCTTCGTGAAAAACCCATGAAGCAAAACACACCTCCCTAAAGAGATTTTAAGAATTTGGCACAGTTAGTCACTTTGTGTAATCTGCAATCTTCTAGCTGCTGAGTATCTTGAAGTCACTCCCTGTTCACTGAAATCCTTTGATTGAACTGGTTGAATACTTTGAAAAATGCGGAGTTCTAGCTAATGGATTTCCCAGTAGGGGTTTCTGCATATTACCTGTATAGTAGTTATCTGCATATGTTTCTCTGCATGTTCTCTACACAGTTGTAAGGTGTCACTGTATTTAACTGTTGCACTTGTCAACTTTCAATAAAGCATACAAAATGTTGATAAACAAGTGTTTCTACGTTACAGTGTTAATGTAATGGTAGTCACTTCCA EMBV3_15636 GTGACTTCTCCAGCTTCACTCGAGCTTCTGCTCTGGGTTTTAGGGACACCCTTCATGCTT Gene BVV0102_331067 + 1 EMBV3_27912 GK000024.2:42628183-42637328 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32345 AGAACTTCTCCTTAAATAACTAATGTAACTGGCCAAAACAAGAAAATAGGCAGGCACTGG Gene GeneID:537136|KLHDC1:XM_002690884:320_cdna Constitutive 2 NULL GeneID:537136 10 GENE KLHDC1 NULL kelch domain containing 1 EMBV3_39742 TGTTCATAATTTCTTTCATATTTAAGTTCTACTGCTGTTCCTCTCATATAATTGTTTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06645 GTACGCAAGACTGCCCTGCTGCAGTAAACTTGGAGAGCTTCCATGAGGGAACTCACTGTT Gene GeneID:616523|SLMO2:NM_001035476:1309_cdna Constitutive 0 NULL GeneID:616523 13 GENE SLMO2 C20ORF45 MGC127485 slowmo homolog 2 (Drosophila) EMBV3_32944 TCCTCGAGAAACTGATGAGTTCTGCAAGATTGACTGATCTGTCAGCCTCTCGGTTGTCTA Variant GeneID:508954|SORD:NM_001037320:53_cdna 385^665 1 EMBV3_13158 GeneID:508954 10 GENE SORD NULL sorbitol dehydrogenase EMBV3_18616 GACTGCAGAGATCACATCCCTTGAGGTCCAGAGAGAGACAAGCTTCCGGTTTGTGTGGTT Gene BVT0102_332729 + 0 NULL GK000013.2:41919111-41979469 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37307 TACTACCAGAGATGGAACCCCACCATGCGTTAGTAGACAGTAGGTTTTCTGATAGAAGCC Gene GeneID:511775|NSUN6:NM_001083670:94_cdna UTR3_Alt 2 NULL GeneID:511775 13 GENE NSUN6 MGC137499 NOP2/Sun domain family, member 6 EMBV3_26174 ACGTGCACATCTTTCTGGCTAATCTCTATGTGCTGGTGCCTCCTGTGCTCAACCCAATCA Gene GeneID:508687|LOC508687:XM_002693212:417_cdna Constitutive 0 NULL GeneID:508687 15 GENE LOC508687 NULL similar to olfactory receptor, family 52, subfamily D, member 1 (predicted) EMBV3_41395 TGCTACCTAAAAGTAGGGAAGGATCCCTTTTAAGTATATGGAAAAATGGACTGTAAAGGG Gene BVV0101_025283 + 0 NULL GK000017.2:47202359-47281592 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077195 TCONS_00077194 1 XLOC_047005 Coding TCONS_00077194 XLOC_047005 Coding Coding RAN 17:47276603-47283781 = TSS57767 5773 1 TCONS_00077194_2 128 0.190195738783994 4 0.196182248850495 0.000132963482829825 0.000109082319463906 0.000154045138026684 0.000130946915557496 0.000199056945295117 0.000111058929878843 0.000139259237901713 0.000445427634716223 0.000586169093326545 9.05820957310176e-05 2.18486041178138e-10 5.06824638926627e-05 2.80993062587611e-05 0.000166910813922273 0.000136964134139407 0.00196396502185637 0.00133504339592466 0.00204080062754823 0.000217558781714923 0.000105073446015297 0.000151606194076593 0.00117696562573844 0.00132166573125756 0.00167489369527697 0.00019921773833209 0.000153980819806062 4.55272789288683e-05 0.000188565089605071 0.000132779542161058 1.57606006296235e-06 NM_001034705.1 RAN Bos taurus RAN, member RAS oncogene family (RAN), mRNA. 0.0 1409 99.87 0.135631387493504 XM_005253592.1 RAN PREDICTED: Homo sapiens RAN, member RAS oncogene family (RAN), 0.0 1352 74.82 0.361683699982678 TCONS_00077194_2 sp|Q3T054|RAN_BOVIN RAN_BOVIN GTP-binding nuclear protein Ran; 2e-91 268 100.00 0.9921875 1 coding 0 0 0 0 -0.203162998089927 0.595454373948853 -0.0210323261153472 0.790510976749544 GAGAGATGGTTATTATATACAAGCTCAGTGTGCCATTATAATGTTTGACGTAACATCAAGAGTTACTTACAAGAATGTGCCTAACTGGCATAGAGATCTGGTACGAGTGTGTGAGAACATCCCAATTGTGTTGTGTGGCAACAAAGTGGATATTAAGGACAGAAAGGTTAAGGCAAAGTCAATTGTCTTCCACCGAAAGAAGAATCTTCAGTACTATGACATTTCTGCCAAAAGTAACTACAACTTTGAAAAGCCCTTCCTCTGGCTTGCTAGAAAACTGATTGGAGACCCTAACTTGGAGTTTGTCGCCATGCCTGCTCTTGCCCCGCCAGAGGTGGTCATGGACCCAGCCTTGGCAGCACAGTATGAGCACGATTTAGAGGTTGCTCAGACAACTGCTCTCCCGGATGAAGATGATGACCTGTGAGAAAGTGAAGCTGGGGCCCAGCGTCAGAAGTCTAGTTTTATAGGCAACTGTCCTGTGATGTCAGTGGTGCAGCGTGTTTGCCACTTTATTATATAGCTAAGCAGAACATGTGCTTAATCTTTGGATGCTGAAGGAGATGGATGGGCTTTGGAGTGAATGTGGCAGTTAAAAAAAAAACCTTCATTTTTTGGACCTGCATATTTAGGTGTTTTGGAACACAGTTGTTTCCTCCTTGAGTTTCAAATATAAGACTGCTATAGTCACATGACAATATTGAGAGGTGGAATCTTGTTTGTTACTGTCATTCCCATTCCTTTTCGTTTAGAATCAGAATAAAGTTGTATTTCAAATATCTAAGCAAGTGAACTCATCCCTTGTTTAAATGAGCATTTAAAACTGCTAACAGGGAAAGTTGTGCCATGTTACTATTTGAATTGCCTTTGCTACTACCACTTACCTTGAAGTCAGGTTAAATGCTTCTAATTTTCTGTATACTTGAATCATTTCACACAAACGTAACGACAAGTCAACAGTATTGTATTTGATGAGAGGTGTAAATACTATCAATAGTTAGGCTAAAATAACATCTACCCCACCTGCCTTTGGGCTTACGTAGTGTCACCTAGAGATGAGATTTATGTGACCTGTGAAAGGTGGTACCTGTTTCAGATTTTCAAACAGATACCTTAATTATATTTGCATTTTATGGCAGAAGTAACCATTTTCTAATGTAGAGCTTGTCAAAGTCCAATGAAATCATACAAACGGTTGCAGGAACTTGAGGGACATCTCATCTGTTAAATATGAATATAATTGTGCATTTACTTTTTTGTTTTTTGATATTACATGTTTAATGTAAAGTTGGCATTCTAGGAAGATGTTCCATGTTTACCTGCTGTTAAGTACTCCCAAGCTTTAAAGGTTATCAAAGATTAAGGATTTCAATGGATATATCACAGCTTTGATGATTTTTCTCTCCCCAAAGAATTTTTCTGGGTGGTGCAAGAACACCTCAGGATGCTGCAGCATAAAAGTAGGTCTTAGGTAAGCCTCTCAGTGATGTGAACAGACTGCCAAACTTTCAGTAGACTAACCACTTAACGTTGTATGGTTTCCACATGTAAACATGAATTGGGTCGGTCTTGCCTGAGTTTGATCTCACTGACACCATACTGTAGCAATTAGAAATCAAGACGAGCTATTTTCCTCTTGTAAGTACTACTGTACTATAGTTCAGTTTACCAAAGTTCTTCAGATGTCCAATTATCCTTAAATGATTACTTTCCTACCTAAAAGTAGGGAAGGATCCCTTTTAAGTATATGGAAAAATGGACTGTAAAGGGTAAAATTGGGTACATTTTAATTTGTTAAAGTATTGAATAGATATTAATAGATTAACTTACAGATTTGAATTGATGTATATGCTATGCTATATTCAGTTCAGAACCAGACTAACAGATAATGAAGTTTCCCATGGTCAGATGAAATCTTTGATTGAGATACATGAGGGATATGTATTTGTAACCTTATGTAGAATGCCAGTATGACTAATATTCTGAAACCTAAATGTAACAGTAAAATTTTGGGAGCTACTTGGAGGTGGGAGAGAATTTGAGTCATTCTTGGAAGAAAATTACAAAATATACTGCTTTTACTTTGCCTGGATTTTCTGGATCATCTGGTGTTAATTACCTTGTGGGGGATGCATTTCTGTGTCTAGTTCACACAAATGGGGAAATTTCCCCTTCAATTTCAAATCTCGTGTGTAATGGGAAGAGCCAGCAATTGAAAGCCAAGTTGGTATTAGCTTATTAAACCAAAACTGGTAAAAGTAAACAGGAAGTGTTTATGAAAGCAGTTCTGTGATGTTCCTTGGCCAATTTTTAAGAAACCCTTTTGGTCCTATTGATCTCAGTATCTAGGAAAGGGCAGAGATTTCCAAAAATGCATTAGACTTGTAAAGACCAATTTCCTGGCTGATCTTGTGCATCAGATTCTCATAGTGAGAATTTGTTTTCTTTTGTAAAGAAAAAATGAAGAAATAGTAATGAGCATGTGGGTTAAAATTGGTTTGACTTGCTAGTTGTGCATCTGAAACTGACCTTGTCTTTTGAAGATGCCTTCACCTGTCTTGGGGCTGCAGGCATCCTCCTTGGTAGAACAACTTGGGACTCATCCTAAAATCACGTGTCAGGCAAGCACTGCTAACAAAATGCTATGCGTGTTAACCTGCAAACCTAAAGCTGTTTTGGGGATAAAAAGACCCTGCCTGTTTGTACCTTCTTACTAGTTAGGGCTCTGAGTTATCGTTGGCAGCTCTGCCTGCTTAGGTCCCTGTCATTCCAGGCTTTAGCTTCTTTCCAGAATTTGTACCTACTAAAGTAATTTGATTAGTGCTGCAGCTCCTTTATAGCTCACTCATGGGGTGTTAAACTGGCTCAAGTGTCCCTTGACAGATTTGAATTGTGGAGGACTCTTGAAGAGTCCCTTGGACTTCAAGGAGATCAAACCACTCAATCCTAAAGGAAATCAACCCTGAATATTCATTGGAAGGACTGAACACTTTGGCCGCCTGATGTGAAGAGCCAACTCGCTGGAAAAGACTATTATGTTGGGAAAGGTTGAGGGCAGGAGGAGAAGGGAGGGGGTGACAGGATGAGATGGTTGGATAGCATCACTGACTTAATGGATGTGAGTTTAAGCAAAGAGGGTGATAGTGAAAGAAGCCTGGTGTACTGCAGTTGATGGGCTTGCGGAGTCAGACCCTACTCAAGTGACAACAGCAACAAGGGTCCCTGCTGTGGCCATGTCTCTGAGCTGCCTCAGCTCTGGTCAGAACAGTAAATTTGCACTTGACATTGTTTATCTTACTAGTCTAATTGTCGTGAGGGGAAGGATTATGTCTTCTTGCTTGCTTTGCTGTGCTGTGCTTAGTTTTGCTCAGTCGTGTTCAGCTCTGCAACCCCAGGGACTGTAGCCCACCAGGTTACTCCGTCCATGGGGATTCTCCAGGCAATACTGGAGTGGGTTGCCATGCCCTCCAGGGGATCTTTCCAACCCAGGGATTGAACCCAGGTCTCCAGCATTGCAGGTGGATTCTTCACCATCTGAGCCACCAAAGAAGCCCCATATTGCTCCCTTGTGTCCTTTAAATCTCATCCCTGAGGAGGAAAGGAATTCAGGGCTTGGAGATGAGGGGTGGGATTGTTGGGAATGGGGTGGGAAGTGGCAGGGAGGATTTTATGCCATTACGATCTGGTATTTTGAAGTATTTCCCTCGGGATTTGTAGTTTGCATTACCTTTTATCCATTTATTCCAAGTTGTTTCCTTAAAGGAGTGGGGAAAGTGGTCCATCAGGAACTTTGCCACATATGAGTCATTGGATTAGGACAGTTCTGTTAGATGCTAGATCTGTTAGATGCTACCTGGAAGAAGACCCTTGCATTGAGTTTTCAGTTCCTTGTGTTTAAGAAGCAAAGTAGATGCCGTTCCAGATAAGCAGTATTTTTCTAACATGGGCAGTTCACTTCCTAAATTCTGAGCTCCATGCCCTGGGGTGTAATGCTGGCCTTGCAGCTTTCATCTTGGGAAATGAGCAGTCAGGCATCTGCAGAAATGTCATGACTGTAGTGAGTGCTAAGATGGAAACTTAGACAGTGCCTTGAAAGCATGACAAGAATTGAATCTATTTGAGACCTGGAAGGGAGGCCCGTGATCTGAAGGTATCCTGAAAGAAAAGTACTTGAGGCAAAGGGAGCAAAATGCTAGGGCAGAGGATGTGGCTGGAGAGTGGGCAGTGGAGGCCCAGGATGCAGGGTTGCTGGAGGCTCATAGGGGTTTTCAAACCTGTTTATAGAGTCCACACACACAACACAATGCAGAGCCACTGGAGAAGGGTCAGAGTGGCCTATTAGATACTCTCTTGGCAGCAGCAGTGGTTGCCCAGGGCCCAGTGACAATCCAGCCTTGCCCCACTCAAGTCCACTCGGCTTTTTGCTGCAGTATTTCAGAAAAGGGGGGATGACAGCATGGTTACAACATAGAGCAAGCATCTCAGTGAAAACAATAAATATCCACAAGGAATTCCAGGTATCATCTTCTGTTAACCATTTTCTTTCCCCAACTTCACTGAAACATAATTGACACAAATTGTATTTATGGTGTGCCATGTGATGTTTTGATATGGTTACCACAGTCAAGCTATTCAACAAATCCATCACCTCAGAGTTATTTTTTGTGTCTAGTGAGAACATTTCGGATTACTCTTTCAACACATTTCAATCTTAATACAGGGTTACTAACTACAGTCACCATACTGTACCTTGGGTCTCAAGACCTCATTTATCCAGCATAACTGAAACTTTGTGCCCTTTGACCAACACCTCTCCATCTCCCCCTCCTGCACCACCCTCTTACCCTGGCAACCACCTTCCTACTCCGCTTCTGAGTTCAACTTTTTTATATTCCACATAGGACTATTGCCATGTACTATTTGTTTTTCTGTCTTTGGCTTATTTCACTGAGCATAATGTCCTTGCAGCTCATTTATGTAAATGACAGGATTTCCATCTTTTTTTAAGGCTAAACAGTTTTGCATCTTACATATGTATATGTAGTGTATACTACATTTTCCTTATCCATTCATCTGTCAATGGACACAGGTTAATTCCATATCTTTGCTTTTGTAAATAAGTTTCCTTCTTATGAGGAAGGGGTGAAAAATTAAGGTGCTTCCCCAAGCTGTAAGGGTGACACTTGAACCTATTTGAAGTTACGAATTCAAGGCCAGTTAGTTTACAGACAACTATTGGTTAGGATAGATTGTTGTATTGTGGTCTTCCAGGCGTGAAAAATGGGAAACCAAACTTAGGAAGAGTGTTCTCGACAACACTGGTAAAGTGAACTGATAGGCAGTCTGGCGGTGAGTAACATTTGCTTTTTTATTTCCTTACATGTCTGGTCTTTTTTTCCCCCCCAAAGGGAAAAATGTGATAGACTTTCTGTATTAAAAGTTTAGGGATTTAAACAGTTAAAACATACACAGCCACCACATTTCCCACTTACTCTTTAGAGGTAACTATTGTCAACATTTTGTTGATACTTCAAATGTTTCCTCAAAGAGTGGGATTATACTATAATACTGTTTCATGACCATTTTCCACTTTCTCCTAGGGGCTTTTCTACATCAGGTGGTTTTACGCCACTTTCAATAATTACCTAGTAACCCACAGCATGGACAGGCCATCCCATTGTCAGACACATTATTCCATTTGGTCAGATTATGTTTCTTTGCTCATCTTTTGGTTTTCAGAATGCGTCTAGCTCATTTGCAAATGCACTGAACT EMBV3_03215 ATCTTTGTCCTATGAAGTTCGAGAGAAGCTCCATTTCAGTCGCCCACAGACGATTGGGGC Gene GeneID:535768|MTO1:NM_001076069:39_cdna Constitutive 0 NULL GeneID:535768 9 GENE MTO1 MGC139179 mitochondrial translation optimization 1 homolog (S. cerevisiae) EMBV3_20455 GAGTCCTGCTATGGAACAGTCACAGTCTTCAGGCACCACCTCCAGTACATCTTCAAGCTC Gene GeneID:532989|DYRK1A:XM_002685155:131_cdna UTR3_Alt 2 NULL GeneID:532989 1 GENE DYRK1A NULL dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A EMBV3_18135 CTCTTGGATCTGAGGTCACGAATTCAACTCTGGGTCGTCCCCAATCTGGAAGGTAGTCCT Gene BVT0102_212286 + 0 NULL GK000017.2:60294009-60417161 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077656 TCONS_00077657 TCONS_00077655 1 XLOC_047111 Coding TCONS_00077655 XLOC_047111 Coding Coding FBXW8 17:60338263-60388071 j TSS57974 1758 1 TCONS_00077655_2 258 0.0494880546075085 8 0.964864376493264 0.000233715673317694 2.61600032242167e-42 0.000273800122595022 0.000142767228705852 1.52838037764157e-05 1.47636483101152e-05 0.000104317433644312 3.08277143831021e-05 7.81847238239584e-05 1.39417399144575e-05 0 0 1.95610387439517e-05 0.000122482467042115 5.26660844647643e-08 0.00258129847381591 0.000356050077268391 0.00334666533442018 0.000552485721586462 7.30165754984368e-05 3.46311833777006e-05 0.000236321824926457 0.000353180869561841 0.000637700800739447 7.92587856194255e-05 1.29408717263752e-05 0.000465764946841894 0.000114656567151817 2.25853879209835e-05 1.02091767619686e-05 NM_001205475.1 FBXW8 Bos taurus F-box and WD repeat domain containing 8 (FBXW8), mRNA. 0.0 2037 99.91 0.643344709897611 NM_012174.1 FBXW8 Homo sapiens F-box and WD repeat domain containing 8 (FBXW8), 0.0 713 90.38 0.295221843003413 TCONS_00077655_2 sp|Q8N3Y1|FBXW8_HUMAN FBXW8_HUMAN F-box/WD repeat-containing protein 8; 1e-115 348 75.77 0.875968992248062 2 coding 0 0 0 0 -2.26181324655479 0.00396349698478173 -0.00469272815733149 0.922862255261452 GTCAGCCTCACCTAACCCATGTTGACTAAGAATGGGATGATTTCCTAACAGAAAAGAGGAAATGGATATTGGGCAGAAACAACAGATGACTGCTTTAAGGGGAATGAAATGGATGATGTGCCCTTCTTTGATATCCAACTGCCTTATGAGTTGGCAATCAATATATTTCAGTATCTGAACAGGAGAGAACTAGGAAGATGCGCACAGGTGAGCAAGACGTGGAAGGTGATTGCGGAAGACGAGGTGCTGTGGTACAGGCTGTGCCAGCAGGAAGGCCACCTCCCTGAGAGCAGCATCTCCGATTATTCTTGCTGGAAGCTCGTCTTCCAAGAGTGCCGAGCCAAGGAGCACATGTTGAGAACCAACTGGAAGAATCGCAAAGGCGCAGTGAGTGAGCTGGAGCACATTCCCGACGCAGTTTTATGTGATGTGCATTCTCACGATGGCGTTGTCATTGCTGGATACACGTCGGGAGACGTGAGGGTGTGGGACACGCGCACCTGGGACTACACAGCCCCCTTCCTGGAATCGGAGTTTGAGGAGGATGAGCCTGGAATGCAGCCATATGTCTCCTTTGTGAGGATAAACAGCTCGCTGGCGGTGGCAGCTTACGAGGATATTGCCATCAGGCACCCCGTGCGGCACATCTCCTTCAACAGCCACAGCCTCATCACGGCCCACGTGCCTTACGAGCGGGTGGTGCGCAACGCTGACCTGGACAACTTCGCCACTCACCGCAGACACCGGGGGCTGATCCAGGCCTACGCGTTTGCAGTGGACCAGCTGGCCTTTCAGAGCACAGTGCCCGTCTGCCGCTCGGCCTGCGACGCCATGCCGGGTTACAACTACGACCTCGCACTCGCCTTCCCCCCTGACAGCATCTAGGGAAGCGCCTCACTGGAGAGCGGGAGGGGCACCGCACGGGCTGAAGCGTGGAGAAGAGCAACCCCGGGTGCACTGTGCGACCCCACACCCCTCTGCTTCCCCCTTTGCTGGGGGGGGGTCTCCCCGCATCGTTGTGTACACTACACAGAGGCCTTCACTGTAGCCCCCCCTCCAGCACTCTCTCTCCAGTCTCCAAACCCCTTCTTCTCTGGGGGGGGGCCTTTGGATACGCTGGTCTCCGAGCTGACAAGGCCTCATCACCCACCCAGCTCTTGGATCTGAGGTCACGAATTCAACTCTGGGTCGTCCCCAATCTGGAAGGTAGTCCTTTATGCTGGTAGCTTTTGATTTATAATTCTATATTTGTACAATGATTTCATTAACAACTGTTTTGCTTACTACGGTGTCTGTAACATGTGATACAAAGTAGACATTTTCTACATCCTCATGAATAAACACCTGTCCTCCACATAGGGGGAAGATGATGGATTCTGGAGCAGAGAATGAGAACGGGGATAATACTGGAGGAGCCGTTTAACCCACTGAGATAAGACAGGATATGTTAACCCACTGACATAAGACAGGGTAACACAAGAGACCTGTTCATGCTGATAAATAGCTTCCATTTCCGTAAGATTGAGGGCAAACCATTGCATTCCTCTTGATTTAAAGAGTCTTGTAATCAGCAGCAGCAGTCGCCTACCATACCTACAAAATATCAAAGCAGAAAACTGGTGGAGCTAAACAGACAAATCCATGCTCATGGTGGGTGGTCAGATCAAATCGGTAAAAATAAGGATTTGGAAGACGACATACTTACTATAATTTATAAGCTCAACACAGTGGATGTAGATAGGATCCTGTACCTTTGCA EMBV3_01203 GAAGTTGCTAGCAGAGCCTCAGGAACTGCGGCTGCTACGGGCGCCCGGCCGAGGATGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36817 GGCCGTCCTTTCCAAAGTGCAGATGACTCCCAAAGAATGAGGCAGGTGACATTTACATCC Gene BVT0101_043370 + 0 NULL GK000018.2:13031056-13036325 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085455 TCONS_00085456 TCONS_00085453 TCONS_00085454 1 XLOC_051878 Coding TCONS_00085454 XLOC_051878 Coding Coding ZCCHC14 18:13031481-13079944 j TSS63816 7605 1 TCONS_00085454_5 526 12 0.843320539804383 0.00556687145033247 0.00547276595467309 0.00606165576506917 0.00357051051004419 0.0038310814541689 0.00174229568881211 0.00449702004124338 0.00427550543300658 0.00425808670274041 3.87160308533856e-14 0.000556328606970655 0.000170012565959524 0.000530500034775216 0.00267233190935881 0.00367367727390095 0.00131720516006575 1.65087037404542e-10 2.72248599161643e-10 0.00563159971418315 0.00635585023187055 0.00190610095184703 2.08171556915714e-05 0.000571519931249517 1.12006862145645e-07 0.00619359711696456 0.0052964632647816 0.0036774232422148 0.00014709706475292 0.000263346433744318 0.000585029984567468 XM_005218624.1 ZCCHC14 PREDICTED: Bos taurus zinc finger, CCHC domain containing 14 (ZCCHC14), transcript variant X1, mRNA. 0.0 1.174e+04 100.00 0.856015779092702 NM_015144.2 ZCCHC14 Homo sapiens zinc finger, CCHC domain containing 14 (ZCCHC14), 0.0 4854 79.14 0.744773175542406 TCONS_00085454_5 sp|Q8WYQ9|ZCH14_HUMAN ZCH14_HUMAN Zinc finger CCHC domain-containing protein 14; 0.0 710 84.85 0.998098859315589 1 coding 1 1 1 1 0.00695743667408832 0.967144870931371 -0.0327687436056489 0.483496438966436 CAGCTCAACGAGGGCCGCACGGGCGATGAGTTCCTGCTGCTCTTCACCATGGCCTCCAACCACCCGGCCTTCAGCTTCCACCAGAAGCAGGTGCTGCGCCAGGAGCTCACGCAGATCCAGAGCAGTCTGAGCGGCGGCGGCGGCGGCCCCGGGGGCAAGAGCGCGCTGCCCACCTGCCCAGCCTGCCACAAGGTCACGCCCAGGACGGAGCCCCCCGTCAGCAGCGTGGGCAACAGCTTGGAGAACGCGCTGCACACATCCACACATTCCACTGAGGGGTCGCTGCCCAAGAGGCCTGGAGGGAAACTGTCCAGAGTGACTGTTGAAAAGATAGACCTGAAGGGATTATCACACAAAAAAAATGAAAGAAATGTTGAATGTTCCTTTGAGGTCTTGTGGTCTGATTCTTCAATCACATCAGTAACCAAATCTTCCTCTGAAGTGACTGAATTTATTTCAAAGTTGTCTCAGCTGTATCCTGAAGAAAATTTGGAGAAATTCATTCCTTGCTTAGCTGGCCCAGATTCCTTTTATGTAGAGCGAAACCATATGGATCTGGAAGCGGACCTGAGGTATTTGGCTTCGTTACCTTCTCATGTGTTAAAAAATGACCATGTTAAGAAATTTTTCAGCACTTCTTCTCCCACCCAACAGCTTCAAAGTCCAAGTCCTGGCAACCCTTCCCTTTCTAAAGTCGGTACCATGATGGGCGTGTCTGGAAGGCCTGTGTGCGGAGTGGCCGGCATCCCGTCCTCTCAGGGCAGCGCCCAGCACCACGTGCAGCACTCCGCCAGTGCGGCCGCCTTGCCCCACTGCTCGCACTCGGGGGGTGCAGGTTCGGCGCTGGCCTACCGGACCCCGATGGACAGCTCGCCCGCCATCCTGATGCCGTCCAGCCTGCAGGCCCCGCAGACCCAGGAGCAAAATGGGATTTTAGACTGGCTTCGGAAACTGCGTTTGCACAAGTATTACCCTGTCTTTAAACAGCTCACGATGGAGAAGTTTCTGAGCCTTACGGAAGAAGATCTAAATAAATTTGAATCCCTCACCATGGGAGCAAAGAAAAAACTCAAGACTCAACTGGAGCTGGAGAACGCTGCGGGTGGAGGTGGAGCAGGCCCCTCACCAGACGGCCCGGGAAGGCAGCTCGTCTGAGTGCTCCAGCTCCTCACCCAGCCCGATGGGCGTGCAGGCCCGGGAAGAGAGCTCAGACAGCGCGGAAGAGAACGACAGACGTGTGGAGATCCACTTGGAGGGCCCTGACAAGGAGAAGCCCGTGATGCTGCTGAACCACTTCACTTCAAGTTCCGCCCGGCCCACGGCACAGGTCCTCCCTGTGCAGAACGAGGCAGGCTCCACCCCGTCGGGCCACCACTCGCTGCCCCCACAGATGATGACGGCGGCCTCACACATCGCACCCATCCGGATGCTGAACTCTGTGCATAAGGCGGAAAGGGGGAGCACGGACATGAAGCTCCTCTCGTCCTCTGTGCACTCACTGCTGTCCCTCGAGGAGCGCAGTAAAGTCTCTGGACCAAGAAGCAGCATCAAGGTGGACAAGAGCTTTGGCAATACCATGATGGACGTGCTCCCCTCGTCCACCCCCCATCAGCCCATGCAGGTCCTCTCCGGACTCGCCGAGAGCAGCTCCGTGTCTCCCACTGTCTCCTTTGGTCCCCGCACCAAAGTCGTCCACGCGTCTGCACTGGACAGGGTGATGAAGCCGGCACAGCAGCCGGCCCTGGTGGTGGAAGCCAGCACCGCTGCCGCGGGGACATCCAGCACCGTCTTCCACGTGGCTCGGCCGCCCATCAAACTCCTGGTGTCTTCATCTGTCCCTGCGGATTCCGCCATCTCTGGGCAAACCTCCTGTTCTAACAATGTGCAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGACTGCTCTGTACACAGCCAACACCAAAGCTGCCTTCTCTGCGATGAGCAGTGTGCCCGTGGGCCCCCTGCAGGGCAGCTTCTGTGCGAACAGCAACACTGCCGCCTCCAGTAGCCACCCTTCCCCATCCTTCGCAAACATGGCCACCGTGCCCAGCTGCCCGGCCCCCAGCTCCAGCCCCGCGCTCTCCTCGGTCCCTGAAAGCAGCTTCTACAGCAGCAGTGGTGGCGGCGGCGGTGGTGGCAGCTCCCCCGGGAACCTCCCCGCTTCAGCCCAGAACCACCACCACCACCACCACCATCAGCAGCAGCCGGTGCCCCAGCAGCCGGCGCCCGCCCCGCCGCCCGGCTGTGTTGTGTGCACGTCATGCGGCTGCAGTGGGAGCTGCGGCTCGAGCGGCCTGACTGTCAGCTACGCCAGCTACTTCCAGCACCCGTTCTCGGGGCCCTCAGTCTTCCCCTTCCCGTTCCTGCCCTTCAGCCCCGTGTGCGGCAGCGGCTACATGGGTGCCCAGCAGTATGGCGGCGGCGCCTTCCCAGTCGTGCACTCGCCCTACGGTGGTGGCGTGGGCCCCGAGCCCGTGCTGGGTGGCCAGTCCGCCTTCACTGTCCCGCCTGTGCAGAACTTCATGGGGGCGGCGGGCGTCTACCAGGCCCAGGGCTTGGTGGGCAGTAGCAATGGTTCCAGTCACAAAAAGAGCGGGAACCTCTCGTGTTACAACTGTGGGGCCACCGGTCACCGCGCTCAGGACTGCAAGCAGCCGTCCATGGACTTCAATCGGCAAGGTACTTTTAGGTTGAAATATGCCCCTCCAGCAGAAAGTCTGGACTCCACAGATTGATATTTTTCTCTGGCAACAGAACACTATTAAGCCATGGAGACCTAAGGAAAATTAAATACAAAACTGAGAAGTCTAGTTGCTGTTGAGCTTAATATTTTTAATCCAAAGGTGCTTTACTTTACTAGACTGGATAGAAAACCTAGCGTAGGAATGCATCAAACTCAGTTTTATTGCCAAAATCCTAGACGGGAGCTTGATGTCAGGACTGGCCTAGTGGGTATCTCCACTGTGGGTGAAAACTGGCCACCTCCACCCTTGGTCGCAATGCAGAGACCTGCCGTCTCCTGAAGAGCATTGCCGTAATTGGTCCTTCTAGGCTCACACGTAATTCCAGGGCAGCTACGTGAGGTTGGATCGAGAACTGAAGGTCGGAGTTCTCCAAGTGGAGTTCTACCAGTCGGACTCTTGACACCCCTGGTGAGGGAAAATGTCGCCTTTGTTTTGTTCTGTTTGTTCTGTTTCGTTCTTAACAGTGGTTAGGCACTAATCTCTGGGCTTTTTAAGGATTGCACTACAGAAGAATGTAAACTGATGTCAATCTCTGCAGTTCTGGGAGACAGACTCCCTGAGACCAGTCAGTGCAAGACACTCAGAGACTCCGTCTTTAGAGTCGGCACCAGCAGGCTACATGACTTAGTACACAAGAGGTGTTAGTGTTCCTTCCCTCCTTAAAAGCACTTGTAGCAGTTTTCAGGTTTTTATTTTTTCCTGCAAATACATTTAAACTACATTATTAAACAGAAATAGTTACTTGCAACAACTTAATTTCTAAAAGGGTCCAAGTCCCAAAGAATCCCTAGCTGTCAAAGCTTTGAGGACACCTTCCTTCCCAGCCCTTCAGAGCTTTGAGTCCTGTCGTCTTCCCCATGAAGGAACCCTGGCAGACGCGATAGCAGCACGGCCTCGTGATCGGCACTGACGGGAGGCTGCGTATCCTTAGCCAAGTTTGCAAGTTATTTTATCTCCCATGGACTTCCCAAGGACCCCAAGGCTCACTGCTAACGGATTCACACTTGAGACAGACCTTTCAACAATAATACAGTCCTACAATCTCTGAGCAAACGACTGAAATTTTCTCCTGTCAACTTCTTTTGTATTAGGCTCTGTATCAATAGTTAATTCCATTTAAAAATTACCGGAAAACTACAATAGAAAGTGGTTAAGACTCTGAAAGAGACTACACCGACAGGACAGAGCTACAAGACCTGCAGAAGTCTAGTTTTATCAAGGTGGGAAGTACAGTCCACCACGCAGCTCTCAATTTTACCCCATGCAATGAGAGCTTTTGTTGTGAAAGTTAGGGACTTAAAGCTTCATGGCTAAAGGGAATTTTGTGCTTCAATAATACTGTTTTAAATGCTACAGCCTTCAATGTTAAAATACTGATTGGTAAGGCCTTGCCCAGGGATTTTCCAGTTGAATATTTAAAAGAGAAAATAATAATACACAGACCATTCTTAAAATGGACAATCAGCCTCATGCAAAATTGGTGTAAATCAAGAGTACCCTAGAATTTGAGGCATTGTGTTGTAAGGCTTCAAAATTTTCAGATCAGTTTCCTGGCTTCTTGGAAACTAAGGCAGAAAGTTGTTACTTTTTTTAATGAAAGGCTTTTAGTAGAGTTTTTTAGAGTTTTATTTTAGTAGTTTTGTTTCTATGCAATGCAGAATTGACAGACCTCTGTATTCTCTCTCCTTGGCACAGTGTTACCTACAGTTTTGAAGTAATGATGATGCTTACAACAGCTTTTTGGGGGAATGTTACATTGATCTCTTAAATTATAAACACTACAAAATGTCAAAATTGTGAGAACTGACACAACTTTGCCTTAAAGAGTACTAGACTGGAACTTGTCATATTATGTTTAAGGAAGACTTGGAGTGTTCATTGATGTTTACGATTTTAATATTTCTGAAGGCCGTTACAGTGGCCTGGATATGTGCTGAAAGCCAAACTTTTAAAATTTTTTGGTTTTTTTTTAAACAAAGAACTATTTTAAATAAATCCTATTTCAACACAGTGAAATTGTTGAAAACTGTCTCATAACAAAAGAGAAAAATCATATTTAGGGTTTTTTTTTTTGTTTTAGTCGTCAGTATCGGGGAATGAAAGTGTCTGTTGTTACCCTTATAACTGTTTTGATAAATATTAGAGGTTAGCGTCAAATACAACAAAAAATCAGAACAAACTTCAACTTAAAGTATGACATTCAAATTGAGAGAAATAGGTTCAGACATTGTGTGGCTGTGTTCCAGTTATGAGAAGTCTCAGAGAAACTTCTAGTTGTCTTTGAAAATGCGTGTGGCCACTCAGAGTTGCTAACGGTAAAACATGAACACGGGACACACAGGCACAAAGCATTCAGCGGCCGCCCCGTGAGACCTCTTCTCGAGTGAGCGGGTCCCATACTTGGGAATATTTGCTAGCAGTATCGTCTCTGATGAAATTTCTCTCCAGAAGCAACCACAGTCAGTGAGCCTAAAGAGCATTTGGCATTGCCTCAGAGGATGTCCTCATCAGCTAGAAACAGATCAGGCTGGCCCTTTGAATCAGTCACTGAAGTTGTGGGCTCAGTTTCTAAATGCTGTGGCCCCAGCCACTGTGCTCTGTGTGGTCTGTCATATCTTAAAGTTTCTATCCCCAAGAATGGGGAAAGTGGAATGTACAGATTGAAGTAGATACGTTGGGATAAAACACTAATTTTTTTTGTTTTGTTTTTTAAAGCAGAACACTCGATTTTCTACCTTATTTTCTAATTTTTATTTTATGATATTGAAAATTGGAAAGTGTATAAATGTTGAAAACTTCTAATTGCTAAAGAGCACTGAGAAAATGGGAGCTAGCACTTAGAATAATAAAGACAAAACTATTTTCTTGAAAGCAGGTATGTGATTGGATGTTTTTAAAAAAAAAAACCAGCATCATTTATAATCTCCAAAAGATTACACGAGTTCAGCTTGTTAATATAGTAGTCAGTAGGTTCAGTATTTTAATTTACCAATTTAGAATTCTAGGTCCTTTATCGCAAGAAGTCCCACAGTTAGTTTATACTGCATGCTGTGTGGAGGTGCAGAGCGGGTAGTAACTTTGCCTACCGTTACACGGCTGTCACGCGTTCCCGTCTGAGCACAGGCTGACCGAGGCTTGCATCTGTCCACTCACTCGTGTTGCTAGTGAGCACTTTCCTGAGCGGGACTTGGGTCGCACCCTCCTCGCTCCGTCACTGTCACTCTTCCTGCTTCTGTGGTGGCTTACTAGATGCCTTGCTAGTTTTACACGCTGATAACTGATGGCGTTACATGTCCAAGAGTCTTAAAGGTTGTAAGGGAAACCGTGACCCTGCTCAGCTCGACCACCCGTCCAGTGGATGGGCCCGTGGACCCTGAGTGAGGTGGCCGTCCTTTCCAAAGTGCAGATGACTCCCAAAGAATGAGGCAGGTGACATTTACATCCATGGGTTCTGAAGAGGCTCAATTAAAAGTCCTGAGGTTCTGAATCAAAGTGAGTATCTTTAATCAACACTTGCAAACTACGTACTGTGCTGGTTGAGGCCAAAGGTCAATGTTACTACACTGTTACTGGAGGGAGGGGCGCGCCGGCCAGTCCATCCCGGTGCTGTGAGGAGCCCCTCATGCGTAAAGTTCTTAGATGCACAAAGACAGGCTTTGGTACTGAAACTGAAGACCTCGTGTACTCAAGAATCTTCACAGCTTCTATTGGACATATTTCTTTTTAGGAATGAAGGAAAATTCTCCCATTTTTGAGCCATTCTTTTATGTCAATTCTACAAAATTGCATGTAACTTTATAAATATTTTTAAAAGATATAGTTTTGTAAATATTTAATATTCTGCTAATTTGATTTTGAATTGTAAATGTCAAGTATTCTGTTTTTGGGGTTTTTATGTTTTATTATACTTTGTTAAAAAGGAAAAATTGTACATTTTTAGAATGTTTTTATGAGTAAATTTAATGTACTGAAAATAAAAATTAAAAAAAAAAAGGTTCTTTTTATTAGGTCTTTGTCTCATATAATACAAGGCACATATCCTTTCCAATGGTGGCTCTTGATCTCCAAGTTAGGGAGTCTGTTCCTTCTGCCGCCTTCTCAGTGTTACAAAAGGAATACCTGGTCTTAAATCCACTTTCTGTCTAGTTTCCTGGGTTTTTAAAAAATGTTCTATGTATGAATAGAAATGTGAATTGATTTGGGATTGGTTTTAAGGTCTTCCAGCTCCCAGTTCCATAATCAGGGTCAGCATTACTAGACCAAGTGTCCTTCGGACATTTCCAAACTCGTAGTGAGTGTGCCCTGGTGTCTGTGGCCATGTCCTCCCTGGACTCGGGATGGTGGCAGGCTAACAAGCATGTGTTTGCCCTGGTCTGCGGTGCTACCCTGAGCAGTGCAGGCCACAGAGAGAGAATTCAGGGACTTTCTCCCTAGCAGGAATCTCCAGTTTGGCTTGGTCTTCTCAGACTTCTGGATACCCGGAGAAAAACATATGCACATGCACGGTTCCAGGACTGGTCAGGGCTCCTGTCAGGTAAGTAGCATCAGGAGACACAGCTGGCCACTCCTGGGACCTGTTAGGTTGCAGCCCCCCAGATAGGGAAGGCCTCCCTTTCTGGTCACGCGCGGGGACTCCTAGGATGGGGATCACGTGCACACCTGCTGTTTACTGTGTACAGCCCCCGACCCAGCCACGTCAGGCACCACGGACCACCTTGTAATGCCTTCCAGACCACACCCCACACACAGTCAATACTTCTTGTGTTGTACTTTAGTTCATTTAGAGCAGGTTTTCAAGTGCTTATTCCCACAAAACACCTACCTCTGACACCCCC EMBV3_03539 AGTCCCACTTGCCCTGGAGTTTCTAGACCCTACTCTGGTCAGCTTCAGTTTCCTGGCCTT Gene GeneID:618031|RAB40C:NM_001081545:291_cdna Constitutive 0 NULL GeneID:618031 25 GENE RAB40C MGC151865 RAB40C, member RAS oncogene family EMBV3_42502 AACGTTCATTGGAAGGACAGATGCTGACGGTGAAGCTCCAATACTGTGACCACCTGATGC Gene BVT0102_081119 + 1 EMBV3_41817 GK000007.2:74185134-74334262 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35573 ATGAAGTTACAATAAAATATAAAGATGAAGTTAATGGCCAACCAAGACCCCTTGAATCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30445 CCAGGTAGTCGGTCGGCTGTGGACTCTGTGACCTTTGTCTGAACGTGTGATGTATGATCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06326 AGCATCTTAATCTGTCCCCAGGTGGGTATGGAGGCTTGTTGAGTTGTATGAGCTGGGCGT Gene BVT0101_032785 - 0 NULL GK000009.2:13021609-13154529 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016550 TCONS_00076104 TCONS_00076107 TCONS_00076112 TCONS_00076114 TCONS_00076108 TCONS_00212042 TCONS_00076106 TCONS_00076109 TCONS_00076105 TCONS_00076111 TCONS_00076110 3 XLOC_008837 XLOC_046737 XLOC_130071 Coding TCONS_00076104 XLOC_046737 Coding Coding PITPNB 17:69588403-69623603 x TSS57208 1580 1 TCONS_00076104_1 111 0.783544303797468 3 0.955197590840649 1.27053066211159e-12 0.000134442461394888 5.27863840515858e-05 6.36036477995588e-05 0.000577618601730027 3.18769261438691e-161 5.04703999303276e-40 4.71455238842663e-05 7.44557786547202e-53 0.000334122180562317 0.00099044394412499 0.000117680706955219 5.45316163382999e-05 0.00123978931525788 5.88753111124813e-93 0.00163663542678437 0 2.02141250158019e-107 2.46673905983161e-95 6.89554136803985e-77 0.000184580093872048 0.000391472817538107 3.14912108203379e-05 1.39331226545327e-172 0.000652797404790261 0.00012761941558273 2.691233825329e-178 0.000462071498903486 9.76798882758328e-05 0.000890738653961858 XR_228366.1 LOC101903015 PREDICTED: Bos taurus uncharacterized LOC101903015 (LOC101903015), 0.0 2520 100.00 0.883544303797468 TCONS_00076104_1 sp|Q3V3Q4|PYDC3_MOUSE PYDC3_MOUSE Pyrin domain-containing protein 3; 5e-08 51.2 35.11 0.837837837837838 0 noncoding TTTCCGGAACCCGTTCACAGCTGCCGCCGCCTCTACCTCTACCACCACCGCCGCCGCTGCCGCCGCCGCTACCGCCTCTCAAAGCGCCTGCGCGGCTCCGCCCCCTGCCGTCCCAGCCGCCGCGGCGCCTGCGCGTCCACACCCTTCCGCCGCGACCCGTCGCGTCAGCGCGCGAGAGGAGCTGGCCCCGCCCCAGTCCCGCGCCCCGCCCTGGGCGCGCGAAGGTTCGTCTGCGGCTGCGCGGGCTCAGCGCGTGTTGGCCTGTCTCCAGGCGGCGGCTCGCGTTTCCAGTCTGGTTCTATCGAGGGAGGGGAGGTCAGTGCAGCCTGCGCTCTCTGGACGCAGATTCTCCGATTTGGATCCCGGACAGACTGATTCGTCATATCGCAGCCCCCCAGACACCTGGTCCCCCTATTGCCTAGACCACAAAAAAAGAAGGGACATCCTCTACTTCCACTCCCTCCACCAATGTGGGAAGTCCCGCTGACCTCGAGACTAATGACACCAGAGATCCCGGATGAACAGGAAGAAGAACCACCCACCAGACAGATGTCACCACTCCGTATGAAAGATATTGTTCCCCCTAATTCTTTACCCCACAGGAGTCCACCAGGACGCCCAACTCGTGCAACTCAACAAGCCTCCATACCTACCTGGGGACAGATTAAGATGCTCTGTCACCAGCTACAAGGGATAGCTTCCCCGAAGGGCTCTCCAGCCTCTCCTGAGAGAGTGTTTATTGCTATGCTTGCCTTACTATCTTGCCAGGATTCTCTGGCAGAGCACTCAGAAGCTTGCAACTGAATTACATCTGGCTGTCTTAAGAAATAAAAAAGGGGGAGATGCTGGGAGCCAGCATGGGAGTTCCCACCCATGACAAGGTCAAGCGGGAGAGGCCTGACGGGCAAGGCAAGTCAGGGCTCGAGGGGCGCCCCCTGGACCTTCCTGAGCGTCTACCCCAAAACCAGAATCTGTCTGTTTTACTATTTTACGACTTTCACCAACTCTTCTGACATTAATGAGGGGCTATCACTGACCACCTTTCTCTGTAAGGTGATCAACTTAGACCTCTAGTTAATAAGTCTTCAGGGTATAATAGGTGTGTTCCAATTCATATCCCTCAGAAAGCTTTCTAACTTGCTGACAGGTTTCTGGACTCTTACAGCTGCTCATGTGATTGTTCACAGCATCCCAACCATGAGAGGAATGGGAAGCTTAAGATATTCTAACAATGCAGAGCTTCTCGGGGAGTTAAAATTGTTAAAATAGAACTAGTAGAGGATTTCTTTGTTGAGCTAATGCTTGCTGCCAAGTTTCCATATCCCTTACCCACTGTGACCCTGGGAGTGTATTGATTAATATAGTTGGCATATAGAAATATAAGTAGTAGCTTTAATGTTAACAACCTTAGACCTTTGTATATGATAAAAGCCTTTGCATATGATAAGTTTGCAGAAAGAAAGCCTGGTTTTGATAAGGGTCAGGGACTGCTGACCTTGCATGCCTTTGCACCCCCTATTATCCTCTATGTACAACTTAGGGTATAAAAGCTCCTTTTGAAAATAAAGCTACGGACCTTG TCONS_00078036 r 5' 0 TCONS_00078036 r 5' 0 EMBV3_22201 GGAGGTGTAAGCCCGAAGGCCGGAATCCAGGTCCCGATCAAGACCTCGGCCACGTTCCCA Variant GeneID:509437|RSRC1:NM_001075404:118_cdna 130^451 1 EMBV3_28512 GeneID:509437 1 GENE RSRC1 NULL arginine/serine-rich coiled-coil 1 EMBV3_34746 TACTCTAGGAGGAGAGAAGCAGACGATGAGCCCAGAAGGCTCTTTGTTCTGGATAAACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39455 ACAAAGTCACCACCAGTAAAGTGATATAAGGTCATACCTAGTGTGTGCGTGCTAAGTTGC Gene BVT0102_356010 + 0 NULL GK000011.2:1891333-1895747 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026580 TCONS_00026583 TCONS_00026581 TCONS_00026584 TCONS_00026582 1 XLOC_015069 Coding TCONS_00026584 XLOC_015069 Coding Coding MRPS5 11:1894566-1918934 = TSS19042 2774 1 TCONS_00026584_5 430 0.325162220620043 12 0.886649977428489 0.000220602109488696 3.55765795941732e-05 0.000204230795845316 3.09151283650406e-05 5.74554967616016e-18 2.46738820613513e-05 4.26363739151808e-20 1.49872277257793e-07 3.04915792729928e-05 9.1839938822016e-10 2.4993695835728e-12 1.76257529959624e-15 8.34729897876485e-05 5.53973092699487e-05 3.08802421085506e-12 0.000338688565724066 0.000385236465271719 0.000334246711816726 1.5592995465405e-08 0.000268671110689878 0.000163502518813925 9.69008278530204e-05 0.00088364511067162 0.000410298441530419 7.01144555350246e-05 0.000230540387816018 9.0510225580129e-06 9.18276412168201e-05 2.30495588385357e-16 0.000102397554906687 NM_001046123.2 MRPS5 Bos taurus mitochondrial ribosomal protein S5 (MRPS5), mRNA. 0.0 2605 99.66 0.524873828406633 NM_031902.3 MRPS5 Homo sapiens mitochondrial ribosomal protein S5 (MRPS5), mRNA. 0.0 1525 82.71 0.547584715212689 TCONS_00026584_5 sp|Q2KID9|RT05_BOVIN RT05_BOVIN 28S ribosomal protein S5, mitochondrial; 0.0 890 100.00 0.997674418604651 2 coding 0 0 0 0 0.578270432731418 0.02495966899725 -0.15516804830254 0.0329024382576455 GACACCCCCTCACTCGGGCCTGCGCTGCGGCGCGGCCCCCGGACCCTGGGGATTCAGTCTCGGGCCGAGGTCCGCGGCCGGTGGATGGAGAGCAGTCACGACAGGCGGTAGGAAGGCTGCTCGGCCGGAGGCGCTCGTGGGCCTCCACCATGGCGGCGGCGGTACGCGCTGCGGGCTTCCTCCCTGCTCTGTGTGGCGCTTCGGCGGGTCGTTTATGGTCCAGGCAGCTTTACCTAAACACCTTTCCAACAGCTTCCATTTGGGCGTTGAAAGCTGTTCCCAGCAATGGCCCTTCGTCATCTGCAGGAGCCAGAGGCCGCTGCCGTTCTACCCACTTGGGCCCCGCGCTGCAGACACAGTGCTGCACTCCTGCTCCCGGGAACGTGACGGCCCAGCAGTACAGATCCTATAGTTTCTTCACTAAACTGACAGCAGATGAGCTATGGAAAGGTGCTTTAGCAGAAACCGGAGCTGGAGCAAGAAAAGGAAGAGGCAAAAGAACCAAGAGAAAAAGAAGGAAGGATTTGAACAGGGGTCAGATCATCGGCGAAGGGCGTCGTGGCTTCCTATGGCCTGGTCTGAATGCCCCACTTATGAAAAGTGGAGCTATACAGACCATCACTCAAAGAAGCAAGGAAGAGCAAGAAAAGGTGGAGGCCGATATGGTCCAACAGAGAGAAGAGTGGGACCGGAAGAGGAAGATGAAGGTTAAACGGGAGCGAGGATGGAGCGGAAACTCGTGGGGCGGCATCAGTCTTGGCCCCCCTGACCCCGGTCCCAATGGAGAAACGTATGATGATTTCGATACCAGGATACTTGAGGTGAGAAATGTTTTCAACATGACGGCCAAAGAGGGAAGGAAGAGATCCGTCCGTGTCCTGGTCGCTGTGGGGAACGGCAGAGGAGCCGCAGGTTTTGCCATTGGGAAAGCCACTGAACGGGCAGATGCTTTCAGAAAAGCAAAGAATAGAGCCGTTCACTATTTGCATTATATAGAACGATATGAAGACCATACCATATACCACGATATTTCCTTAACATTTAAAAGGACACATATCAAGATGAAGAAACAACCCAGAGGCTATGGCCTCCGCTGCCACCGAGCCATCACCACCATCTGCCGGCTCATCGGCATCAAAGACATGTATGCCAAGGTCTCTGGCTCCGTCAACATGCTCAGCCTCACCCGGGGCCTCTTCCAGGGGCTCTCTCGCCAGGAAACCCACCAACAGCTGGCTGATAAGAAGAGTCTCCATGTTGTGGAATTCCGGGAGGAATGTGGCCCTCTGCCCATCGTGGTTGCCTCACCACAGGGGGCCTTGAGGAAGGATCCGGAGCCAGAAGATGAAGTTCCGGATATCAAATTGGACTGGGACGATGTCAAGGCTGTGCAGGGAATGAAGCGCTCTGTGTGGTCAGGTTTAAAGAGAGCTGCCACGTAGGCCTCCCTCCTGCCTCGGCCAGCCTGGCACTGGGTGCTTCCAGCACCTGCGAGAGACTCATCCTCTCACGCTTGAGATTGTCAGGGTTTTTTAAAAGGAAAGGCCAACCTTACATTTCTTTATTTACAAATAATAAATGATGCGGATGTAACTGATTGAGCACGTCATACATACCAGTCACTGTGGTAGGAACTTTACATATGTGTCTTAGTTAAAAACTACTTCAAATATTTATTTAAACTAGTTAAAACTCAAATGAATTGGGGAGGCAGGGCTTCTAGTCTGACCTGATAAAAAATAATGTGCAGTCAAGTTATAGTTACTTGACTGTAACACACAGTTAGAAAGCTGAGGAAAACATGCAGACTTAGTTCTTTTTGACTCCAGAAGTTCTGTTTTTAGTAAACCTCTTTGTATCCATGTTTGGGTGGTTGCTGTAGGCATTATTAATAGCACAGCAGTGAAGAATCTGCCACCCGTGCGGGAGCTGCAGGAGATACCACTTCAATCCCTGGGTCGGGAAGATCCCCTGGAGGAGGGCAGGACAGCCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGCGCCTGGCGGGCTACAGTCCATGGGGTGGCAAAGAGTTGGACAGGACTGAGGCAACTTAGCGCGCACACACTAGGTATGACCTTATATCACTTTACTGGTGGTGACTTTGTACTAGTTTGAGTGAAGTATACGAACCTTACCTATCTTCAAATCCCTTTACCTCCCGTTTGTATAATTGTTTTAGAATTTCCTCTGCCTACACTGAGAACCACATTAGACTCATGATACTTCTGCTTCAACCATCAAGCATAATATCAAAACTCAAGAAGAGGAAAAGCCCATTTTATTTACCCATGTTTTTGCTCTTTCATTCATTCTTTCCTGATATTCCGAGAGTCCTTTTGTCATTTTGAGTGGGGCAAAGCCAAGTTCCCCTCCTGTGTATCCCCTTTACTCACACGATGGCCACACTCCCCACACTTCTGACATCAGATGTGGGGGTGGAGTGGGGGAGTGTTTCCTTCCCGAGCAGTCCTCTGCAACACCAGCTGGATGTCCTACAGTGTAACTCAGTTCTGACACTACCTACCTGGAGGTCACGTCAAGACTCCACTGGCTAAGGGCTCAGGCCCCCAGGACTGCCCCACCCCACTTCAGAGCCAGTCGCAAGTCTGGTTGTTACTAGGCTTCGGGCTGATAACTGTAAATCAAAAGTTGCTATGACTTTCTGCCTACCAGTTTGGTATAAAAGGATATGATTAAAGGGTACACATGAATTTCCAGATGGGAGAGGTGCAAAAT EMBV3_40526 CGCCCGGAACAGGCTTCTGCAGGGCTTGAGCCAAGGCCGCCGCGATGCCGCACTTCCTGG Variant GeneID:535121|LOC535121:XM_002687955:51_cdna 231^411 3 EMBV3_31332 GeneID:535121 5 GENE LOC535121 NULL similar to rCG60321 EMBV3_04671 GTGCATTAGAGTCACCTGAGAAAGGTCTTTAGCAAGCCAGGCCCCAAAAGTTATCAGTGA Gene BVT0102_177310 - 1 EMBV3_36935 GK000015.2:17760976-17797407 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20391 ACAAGAAGGGAAAATTGATTGCCAAGAGCAACGGCAAAGGCAAGGACTGCGTGTTCACGG Gene GeneID:326284|FGF8:XM_002698442:430_cdna Constitutive 0 NULL GeneID:326284 26 GENE FGF8 NULL fibroblast growth factor 8 (androgen-induced) EMBV3_05758 AGCGAGCTCCTGGGCATCCCGCTGGACCAGATACTCCTTTTTTGTAGCAATGGGCTACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22534 CAAGCTACCATTCGAAGACTGAAAAGGTCACCAGAGAAACAAATGGCCGTGCTTCCTCGG Gene GeneID:386587|GDNF:XM_002696371:75_cdna Constitutive 0 NULL GeneID:386587 20 GENE GDNF NULL glial cell derived neurotrophic factor EMBV3_40861 CCCCAACTCTTCTGACCCGATCTGCACAGGGCACTGCCCAGTTCCTCGGTAAATAATTTA Gene GeneID:618375|FANCA:XM_002694864:827_cdna Constitutive 0 NULL GeneID:618375 18 GENE FANCA NULL Fanconi anemia, complementation group A EMBV3_10006 TCGGAGGACTGGGAGTGATCGCTGCCCGGGAGAGGCTGACTGCCAGGACCGGAGTTCCCA Gene GeneID:100138354|LOC100138354:XM_002694398:36_cdna Constitutive 0 NULL GeneID:100138354 17 GENE LOC100138354 NULL hypothetical protein LOC100138354 EMBV3_14903 TTGACTCTTCTCGCTTAACTACGTCGGCGGGCTCCCTTGGACAAGACCATACAGTACTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07590 GTGCTGCAGAGAGGAGTGATCAGCATTCCAGTTTTTCAAGGTCGAAGGATACTCATGTTG Gene GeneID:511003|CXHXORF23:NM_001083665:2_cdna UTR3_Alt 5 NULL GeneID:511003 X GENE CXHXORF23 NULL chromosome X open reading frame 23 ortholog EMBV3_43073 GTGGTCACACCCATGCTGAACCCCTTCATCTACAGTCTGAGGAACAAAGACATAAGGAGG Gene GeneID:787574|LOC787574:XM_002688619:407_cdna Constitutive 0 NULL GeneID:787574 7 GENE LOC787574 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_09048 CAGGTCATCGTCAAGATCATTGGGCATTTCTATGCCAGCCAGATGGCTCAGCGGAAGATA Gene GeneID:516853|IGF2BP1:XM_002695906:249_cdna Constitutive 0 NULL GeneID:516853 19 GENE IGF2BP1 NULL insulin-like growth factor 2 mRNA binding protein 1 EMBV3_07244 CTTGAGCACACTCTTGGATGCCACATTTCCACTTCCACCCATCCCCTGGGTACAGTTGTT Gene GeneID:282137|AGPAT1:NM_177518:39_cdna Constitutive 0 NULL GeneID:282137 23 GENE AGPAT1 LPAAT 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) EMBV3_31184 GAAGATGTCAACAACCTGCGAACCAGGAGTAATCAAGAGCAGAAACCCCTTGGAGAAGGG Gene GeneID:513468|CD244:XM_002685894:111_cdna Constitutive 0 NULL GeneID:513468 3 GENE CD244 NULL CD244 molecule, natural killer cell receptor 2B4 EMBV3_03326 CGCTGGAACTGCATCCTGATGAGAAACCACGAAGTCACTGAGCAGCCCATGGTTTTGGAA Gene GeneID:516494|ARSD:XM_002700425:19_cdna Constitutive 0 NULL GeneID:516494 X GENE ARSD NULL arylsulfatase D EMBV3_09107 AGTGCCGTGAATGAACTAAAAGGAATGCTGGCCTCCCAGTAACACTGGATACAGGAAACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09965 TTACGTAAATGTATGTTTTATTAGTAGTGATGTCCAGTTATAAACAGAAAAACATGATGT Gene GeneID:539533|N4BP2:XM_002688205:76_cdna Constitutive 0 NULL GeneID:539533 6 GENE N4BP2 NULL NEDD4 binding protein 2 EMBV3_14117 GCTGGAGTGAGCCCCCCACTTATCACCCAGATGTACGAGTCTGATGGCTCCGTCATGGTC Variant GeneID:511447|WDR54:NM_001046086:23_cdna 356^418 1 EMBV3_24278 GeneID:511447 11 GENE WDR54 MGC137245 WD repeat domain 54 EMBV3_41479 AGGCTCCTGGCCGTGGCCCAGTTCATTGGAGAGAAACCAGTCATCTTTGCTAACTCAGAT Gene GeneID:100295146|LOC100295146:XM_002698085:98_cdna Constitutive 0 NULL GeneID:100295146 25 GENE LOC100295146 NULL hypothetical protein LOC100295146 EMBV3_11209 GTTCTGGGACCCTATCGGACGTTACAAATGAATCCCAGCCACCCAGGGACCAGGACTCTG Variant GeneID:515848|ACBD4:NM_001046214:251_cdna 408^700 2 EMBV3_15966 GeneID:515848 19 GENE ACBD4 MGC137561 acyl-Coenzyme A binding domain containing 4 EMBV3_00304 GAGTCGGGAAAGTGAAAGCCCCCCTCCTGCTTCAGAGGTTTCCAAGTATCCAGCAACTAA Gene GeneID:510793|FAAP24:NM_001046062:589_cdna Constitutive 0 NULL GeneID:510793 18 GENE FAAP24 MGC137368 Fanconi anemia-associated protein, 24 kDa EMBV3_00346 GGCTTATTGCCAAGATGACAGCAGAGGAAATGGCCAGTGATGAGCTGAGGGAACTGAGGA Gene GeneID:533803|TCEA3:NM_001046360:218_cdna Constitutive 1 NULL GeneID:533803 2 GENE TCEA3 MGC137536 transcription elongation factor A (SII), 3 EMBV3_12506 ATACATGAACCCCGCACCCTTCACTGTTTCGCCCAACACCCACGTCTCCCAAGTGTTCAA Gene GeneID:520210|CLCN6:XM_002694039:106_cdna Constitutive 1 NULL GeneID:520210 16 GENE CLCN6 NULL chloride channel 6 EMBV3_06370 CAAAGTGCATTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCTACATGT Gene GeneID:529416|FLRT3:XM_002692042:5_cdna UTR3_Alt 2 NULL GeneID:529416 13 GENE FLRT3 NULL fibronectin leucine rich transmembrane protein 3 EMBV3_24764 CAATTAAGCCCATGGACCATAACTACTGAGCCGTACTCTGGAGGTCTCGAGCCACAACCA Gene BVV0102_108819 + 0 NULL GK000003.2:26888450-27002623 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169259 1 XLOC_103321 NonCoding TCONS_00169259 XLOC_103321 NonCoding NonCoding - 3:26893718-26924864 - TSS126778 392 0.816326530612245 2 0.987477925830791 0.000485916689336524 0.000623754632006528 0.000849857183886213 0.000381312772790902 0 9.12512786683211e-05 0 0 6.0383662501245e-05 0 0 0 0 0 0 0 0 6.400753161614e-05 0.000539648245231875 0.000155936623161937 0.000802991127821236 0 0 0 0.000238608470093126 0.000654445380949156 0.000627766489383473 0 0 0 NM_001001159.1 TLR6 Bos taurus toll-like receptor 6 (TLR6), mRNA. 3e-40 168 73.55 0.775510204081633 0 noncoding CCTTTTCAGGTGTGGTTAACCACAGAGTGAGGACGCGAGCTCTAAGCTGGACTTGGCAGCAGAAGAGAGAAGCCCAGTGGAAAAGAATCCATCTGCCAATGCAGGGGACATGGGTTCGATCCCTGGTCCAGGAATATTCCACATGCTGAGGGGCAATTAAGCCCATGGACCATAACTACTGAGCCGTACTCTGGAGGCCTCGAGCCACAACCACTGAGCCCAGGTACTGCAGCTACTGAAGCCAGCACCCCAGAGCCCATTTTCTGTAACAAGAGAAGCCACTGCAATGGAAAGCCTGCACACTGCGATGAAGAGTAGCCCAGCTCACCGCAACTAGAGGAAGCCTGCATGCACCAATGAAGACCCAGTGCGACCAAAAATAAAATTTAAAT TCONS_00169249 TCONS_00169250 TCONS_00169251 TCONS_00169252 TCONS_00169253 TCONS_00169254 TCONS_00169255 TCONS_00169256 s 3' 4288 TCONS_00169249 TCONS_00169250 TCONS_00169251 TCONS_00169252 TCONS_00169253 TCONS_00169254 TCONS_00169255 TCONS_00169256 s 3' 4288 EMBV3_12162 CTCAGAGGAATAAGACATGGCAAATAGCATGCTCAGTAGAATTTTAGGTAATCGAATGTG Gene BVT0102_039134 + 0 NULL GK000001.2:72726627-72737653 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001127 TCONS_00001123 TCONS_00001125 TCONS_00001124 1 XLOC_000263 Coding TCONS_00001124 XLOC_000263 Coding Coding PPP1R2 1:72708714-72729999 = TSS549 4385 1 TCONS_00001124_1 207 0.0659064994298746 6 0.794258598007893 0.00203138920006553 0.00295892193966473 0.00203638903668664 0.00131567580925737 6.98872297113013e-09 0.000966852424518838 0.00260543219732405 0.000538167178558376 0.000972161653715589 1.17905198952202e-08 2.57384955735722e-05 0.000274647582629467 2.76217701539045e-05 0.000479048285760147 0.00048754039712906 0.00267608413976861 0.00157447348103348 0.00896185590390788 0.00233486581673415 3.66280824034852e-06 0.000825802609297076 0.00188393547161913 0.00158312085844857 0.00273433070793466 0.00111853163954066 0.00116444373784302 0.000172135908653891 0.000243948010769014 3.0413583763972e-08 0.000286862738402373 NM_001035392.2 PPP1R2 Bos taurus protein phosphatase 1, regulatory (inhibitor) subunit 2 (PPP1R2), mRNA. 0.0 1741 99.79 0.220980615735462 NM_006241.4 PPP1R2 Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 2 (PPP1R2), mRNA. 0.0 2587 76.88 0.762827822120867 TCONS_00001124_1 sp|Q3SZX2|IPP2_BOVIN IPP2_BOVIN Protein phosphatase inhibitor 2; 2e-147 413 99.03 0.995169082125604 1 coding 1 1 1 0 0.0508003420275418 0.733355165912491 -0.0142389798172516 0.822872882022497 CCTAGATATCGCGAGAGGGCGGGCCCGCTTGGCATTAGCGTCGGCGTCGTTCCGGCGCTAGGCCGGCTTCTCTCCGCGGGCCACGGTTAGAGTGCCGGTGGCCAAGGGCTCGCGGAGGGCCGCCAGCCACGCGGCGTCGGCTAGACGCCAGAGCGTCCGAGTCGTTGTGTCGTGACAACAACTCTGGTGGCTGTCTCCGCGACAGCAGGTGCGGCTGCTTCAGCCCCAGGCGGGCTCGGCGGCTGCCTGGCGAGTTTCTGCTCGCGCCCAGCCCTTTCCTTCCTGAACTCGGCGCCAAGCAGCGACGCTGAGCCGACCGCCGGAGCAGCAGGCAATGGCGGCCTCGACGGCCTCGCACCGGCCCATCAAGGGGATCCTGAAGAACAAGAGCTCTACGACTTCCTCTGTGGTGTCCTCGGCCGAACAGCCCGGCAAGAGTGTCGACGAAGAGCTGAGTAAAAAGTCCCAGAAGTGGGATGAAATGAACATCCTGGCGACCTATCATCCAGCAGACAAAGACTACGGTTTAATGAAGATAGACGAGCCTAGCACTCCTTACCACAGTATGGTAGCTGATGATGAAGATGCATTGAGTGATTCAGAAACCACTGAAGCCCTGACCCCAGATATCTTAGCTCGGAAATTAACTGCTGCTGCTGCTGAAAGCTTGGAACCAAAGTATCGAGTTCGTGAACAAGAAAGCAGTGGAGATGAGGATAGTGACCTCTCACCTGAAGAACGAGAAAAAAAGCGACAGTTTGAAATGAAAAGGAAGCTTCACTACAATGAAGGACTGAATATTAAGTTAGCTAGACAATTAATCTCAAAAGACCTAAATGATGAGGAGGAGGATGAAGAAATGTCAGAGACTGCAGCTGGAGAAAGCATGAATATGGAAGAATCAAGTCAAGGATCTGCTACAAGTGACCAACTGCAAAACAAATCACAGAGTTCATAGAAGAGATTTTTTTCAACACAGTAATTGTCAAATACAAACTCTGTTACGATAATATACTGCTTCTTGTTCTCTACAATTCATGACTTAAGTACCAAAATACGTACCAGTTATTATATATTGCCAAGAATTAAATAACTTAAGAGACTAATTAGACTTAAAATGCCTAATTGATACATATATTCTTGTGCCTAGTACTTCACCACAAATACAGCATAATGTCATCCAAAACTACGTTACTTTTGTAAGAACACTGGTTAATTTGTATAAGATATATAGCCTTTTATGCTTTAGAAATTAATATCTTTTGGGGAGGGAGAGGGGATCTAATTTATTTTCTTCACTTCTAGATGTGATAGCTCTTATAAAAGGTTGGGTTTTTAAAAAATCAAGATCCAGTTAGAACAGCAGATCATATAGGCTGATAAATATATTCAGTCTGAAAAGTATTTTAACAACGTGTCTTCAACTTGTCTGTTTAATTGAAAAGGAGTATGTTATGAGTTACTGTTGCATTTTCTGGCATACTACCTTTAAAATTCCTGTTGAGTTTCTTTTATGTTTACAAGGAAAGGATTAAATTTTTTCTCATCAAAACTAGGTTTTTTCCATAAATAAATTGTCAGGTTAAATTTGCACTAACGTCTGCTCTGACTTTTTTGTACACTCCATGGGCAGACTTCAGATCAGTCTTTCAATAAATATAATTCTAATATAGTTTCAGCATTCCCTTTATATACCTGTGTTAAACTCCTGCCTTTGTCTCTTACTCCTTTCCACACATACGCACAGATTCTGTACCTTTATGATGGATCATAAAGATTGTCATGACATTGGAAACTTTTCCTTTTCTCACATACTCTGTCATTTGCTGCAACAATGAAAATCTTACTTTGACTATTAATGCCTATTCATTCTTCTAATACATGGAGAAAATGAATAGCATCGGTACTAGACAGGAAATACAATTCAGCTGCAGAATTTTCTACATGTCTCTGACTTACAGCTTGCTAATTAAAGTGCTATTATTAGTTTATTGTTTGACTTACTTAGACCTTAGAAAACAACTGAGGTTTTTTTGCATGATGAGAGAATTGTGTGTAACCAGTGATATGATAGTTCCTGAATGTATAAACAGAATTCTGAACACTTTTTAATTTAAAAGCTTAAAATAGTTCCTGCTTTAAGGAAATATGATAATGTATACTATGACAAATGTTCTTTATTCTTCTAACACAATAAGATTTGGACTTTTTCCCCCTAAAATGAAGTGCAGTTCCTGTGTATCTTAGATTACATTTCTAGTCAATTATTTGTATTTTAATTTTTTGTTAGTACCTAAAGAATCCATTATATGAGCAGATTTTTTAAGTAATTTCTGTATATTGTATATTTGAATTGGCTTTTATTGAGCAGCTTATCTTCCACTTGCAAGCTTATGGAAATATCAAATGTCAAAATAAGTAAAAAGTGGGAGAATTATTTACTGTTAGAAGAATGTTTTTATTAGTTTGGATGTCTTCTTTTTTAATGGAATCTAATCAGTACTTCTGAACTGCAGGTATAGTGCTCTAACTAAAACATAAGCTAGTAGTCCCACTGATCGATAAACTAGACAGTGTTTATCCCTACTTTTTGAATTTAGAATATTGAGGTATTCTCTGTTTAAACTTGTCTGGGGGTATTTAAGCTTATACATATATGTGTACATATGTTCATACACACAGATCTCTGTTTTTGGTTTTCTCATTTCAAGTTCTTAGGAAGTATTCATGTGCTCTTTATTTGTAGAAATAGCTGCTATACAGTGAAGAACAGGTAGGAACTTTAACAACTGATCCTTTGGTGTTTTCTACAAATTATTTGTTGAAACTTCAATCACAGGCAAACTTGCATTTCTGGTTTCCGGAAATAGATAGTTATCTCAGAGGAATAAGACATGGCAAATAGCATGCTCAGTAGAATTTTAGGTAATCGAATGTGACTGAGTAAAATTGTTATCATTGTCATGAGTTTCTAATTGATGTGGTATTGAACTAAACAAAAAATGAACCTTTATGACTCAAGTTATATTTTCCTTTGGAGAAAGTTATCTGTCAGTGTTCAGTTCTAGCCAAAGTAGATTTTACTTTCAGTTTTTTAATCAGTATCTCTTCTCTGCTTAACTCTTGATGTCATCTTTTCTGTGTATTCATTTTTCAGTCTGAAATTCAGCAGTGATGCTCTTTAAAAACTGAGACATAAAATGGTATAAATGGATTGTTAAAAATAACTTCAAATTGAAGATTAAAGCAAAGTGCCATTTTCCCCTAGACTTTCATTTTGTTTACATTTTTTCCTCTTAACATTAGTACACTGAACATATTGTAATAAAATACAGTCATATGACAATTGCTTGTGTGTGGATTTTCTTTTCTTCCTACCCAGGTCTTGTGTTGTGGATACCAGAAGAGGGTCTTGGACTACACTGTGAAAGTGATTTGTTTAGTTGCCCAGCATTGTGCTTGGTGTCTTAAGATACAATCCTCCAAACAACCACGCAGAGCAGATATCTTACTAAGTGAGGAAAATATTCTTGGCCAAGTTCTTTGGTTTCAGTGTTTCATACATGCCAAATGACAGGATATAACTAAATTTCGTACTCTCTATTCATGCCTTTTTAGGTGTAGAAATTCCTTCATTTTTGAAGTTGTACCTTACAAGTAAACTTCATTTGGATTTTTGATACACGTCGTGTGCTTTAGGAGTAACATTTTTCAAGTGTTTAGTTTGAGTTTTTATATTTAATCTGAAGAAATTTGGAAATTTTATTTGAGGTTTACACACCATTTAGGAAAAATCTTAAAAGTACAGTTATACAGTGGCGGGAGATGTGCAAATGCATGTGATTAGGTTGTGTTCCACAAGTTTGTTTCTAAACAGGATGTTTCAAACACAAAGCATGATTTTTTTTCATAGACTCTGTTACAAAGTAAGTACCAAGCTAGCCTGTATAAACATATACCTAAAACAGCATTTTTCAGTGTGTTCCATGAAAAGGATTCTGTGAGCCAAATATGCTTTGCACTTGCTGTACGCTTTATTCCCCTACCCCCCAGACTTATAATAATGCATCTCATCATATTAAAAGAGTCTGAGACATCCTGCTTAAGGAACCTGTTTAAAATTTGATTTAACTTAGTGTTTTTTAAAAACATTTCACAACCACCCCAAGTTCCCTTTTCCTTCAAGTAGCATCCCAGATAGGAGTAAAGAAATCAGCTAGAGCCTCTAATACATGAAAATTGAACTTATTCCTAAAAGAAGAGACCAGTGTATCATTGATAGAGGGAAGACATGGTAGCAATAACTGCATATTATGGATTGTATGTAATTTGCCAGGCATAAGACTTAATTTTTAGTAACTTATGCAAGAAACTATAGAATACAT EMBV3_35530 CTGGCTGAAGAACACCTCGGATTGTATTGGAAGTGATGGGAGCCTCGTTGCATTTGGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12750 ACTATTCTTCGACATACTCTTCAGCTTCAAGGTTTGGATTCAGGATTTGTTCCTAGTGTC Variant GeneID:511255|OSBPL9:NM_001075505:43_cdna 338^406 2 EMBV3_19209 GeneID:511255 3 GENE OSBPL9 MGC140169 oxysterol binding protein-like 9 EMBV3_16798 CGCCAGAATCCATCACAAGTACGATGTTGAAAGAGTCCCACAGTCCACGTTTATCTCGGC Gene GeneID:767956|MGC133583:NM_001077026:54_cdna Constitutive 0 NULL GeneID:767956 26 GENE MGC133583 NULL hypothetical protein MGC133583 EMBV3_33272 GGGAGCATTGAAGCAAAATGGGCTTCTGTAGACTGGTACGGGAGCCTAGCTCTCTCTTTT Gene BVV0102_132350 - 1 EMBV3_21875 GK000023.2:39240844-39312099 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19529 TGATAGGAGACTTGTACAGTTGACTGGTTTTCCTCCCGTTGGTAGTTGAGACGCTGTTGC Gene GeneID:505406|DBN1:NM_001045917:14_cdna Constitutive 0 NULL GeneID:505406 7 GENE DBN1 MGC138067 drebrin 1 EMBV3_14830 TGAGCCCCTTGGATAACCTCACGATAACTCACTGCCTCCTTACAGAATCAGACTTGACCC Gene GeneID:529969|PRAMEF12:XM_002707740:273_cdna Constitutive 0 NULL GeneID:529969 16 GENE PRAMEF12 NULL PRAME family member 12 EMBV3_05987 GAGCTGGGCGCGACCTGGATCGCTTTGACTGGCGTCTATCCCGCACTTGAGATAACACCT Gene GeneID:515624|KCP:XM_002686948:94_cdna Constitutive 1 NULL GeneID:515624 4 GENE KCP CRIM2 kielin/chordin-like protein EMBV3_37541 TGCGCAGCATATGTTCACATGGGTAGACGACAGAACTGGGAGATGGATGGGCAATTTCAC Gene GeneID:100138302|LOC100138302:XM_002686475:533_cdna Constitutive 0 NULL GeneID:100138302 3 GENE LOC100138302 NULL similar to magnesium transporter 1 EMBV3_11147 AGGTGTGTCACACACTCCCACAAGGTGCAGTCGCCCCTCACCAGGACGCCTCCTTCCTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11021 CAAATTGTGCATTTTATTAATAGGAATGAAAGCTCATGCTGGAAGATTTGCATAGGGTGG Gene BVT0101_028076 + 0 NULL GK000014.2:39024893-39233169 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053346 TCONS_00053349 TCONS_00053351 TCONS_00053348 TCONS_00053352 TCONS_00053347 TCONS_00053350 1 XLOC_031696 Coding TCONS_00053351 XLOC_031696 Coding Coding UBE2W 14:39228295-39295168 j TSS39367 6881 1 TCONS_00053351_2 180 0.027176282517076 6 0.897191649718866 0.00100656544532878 0.000912612484662768 0.00159860878589439 0.00103970696793212 0.00114758200406305 0.000240569720083824 0.00153540203303573 0.00127090140975241 0.00339097645602018 6.40435830085805e-09 4.04230972929331e-08 8.00931356426886e-05 2.85937892909951e-09 0.00036600831208799 7.34671294581143e-06 0.00112263949506321 0.000895213506244047 9.31297944506135e-07 0.00233791726834304 0.00235224801148459 0.000946606783245637 6.4354454852046e-08 0.000635248425653429 0.00128910948665189 0.00231377771846342 0.000415475692407231 0.00106810377954948 3.06122272716051e-09 8.21028282081327e-09 5.24913330404338e-11 NM_001099122.1 UBE2W Bos taurus ubiquitin-conjugating enzyme E2W (putative) (UBE2W), 0.0 3440 100.00 0.276994622874582 NM_018299.4 UBE2W Homo sapiens ubiquitin-conjugating enzyme E2W (putative) (UBE2W), 0.0 5115 84.03 0.686964104054643 TCONS_00053351_2 sp|A6H795|UBE2W_BOVIN UBE2W_BOVIN Ubiquitin-conjugating enzyme E2 W; 4e-111 318 100.00 0.833333333333333 1 noncoding 1 1 1 1 0.260088630564468 0.437928709000974 -0.0267550017027182 0.659111531213425 CCCGCCCCCCGCGCCCGGGATGCTGGGGCCCCGCGGCGTGACGCGAGCACGGCAGCTCCGCCCCCTGCGTCTCTGGCCTCGCCGGCCTTGGGGGGATGGTACCATCATGGCGTCAATGCAGAAACGACTACAGAAAGAACTGTTGGCTTTGCAGAATGACCCACCTCCTGGAATGACTTTAAATGAAAAGAGTGTTCAAAATTCAATTACACAGTGGATTGTAGACATGGAAGGTGCACCAGGTACCTTATATGAAGGGGAAAAATTTCAACTTCTATTTAAGTTTAGTAGTCGATATCCTTTTGACTCTCCTCAGGTCATGTTTACTGGTGAAAATATTCCTGTTCATCCTCATGTTTATAGCAATGGTCATATCTGTTTATCCATTCTAACAGAAGACTGGTCCCCAGCGCTCTCAGTCCAGTCAGTTTGTCTTAGCATTATTAGCATGCTTTCCAGCTGCAAAGAAAAGAGACGACCACCAGATAATTCTTTTTATGTTCGAACATGTAACAAGAATCCAAAGAAAACAAAATGGTGGTATCATGATGATACTTGTTGATGCCACTGTTCTCATCCTCCTAGCAGAAGATAGTCCTACTGAGAAAATGAGCACTTTGATCATTCAGTCTTTGAACTTTAACCTTTGACTGGAAGTGACCTATAGGCAATGAAGACTGCTTCCTTTGACTGCATTTTTACTCGTGTGCATTCGGGGCGCATGTTGATCGCTGGTTGAGTCCAGGCAACTGACATGCTTTGATTAGTCATACAGTATTAATGCAGGTGTCAGGAAATGTCAAATATAATTCCATTTTTTATTTTTATTTTTTTAAGCTTTTGAAAAGTTCCAGGTCCTCATGTATTGTGCAATAACAATGACTTCCTTGGCGGTTTTGTGACGTTCATTGCCGGCAATGGACGTTGTAACAGGAAAAAATTTCACCCTTCTGCCACTCAATGATTAATGCGTGATAGGGCCTATGACATGAACTTAACGGTTAGAGTGGGATTATAAATAAAGTGAGGGATCCAGCATTACTCTGAAAGTCACCCCAACTGCTCATATTTGGATTCTATGCACTGTGAACCTAAGGTTAACAGCATGACTTAACATGCGTCTTTAAAGGACTGTAATGAAAGATCATTGCGTATTTATTGAATTGTTTATATCTGTTGTCAAATTGTTTTGACATGGACGGTTTTCAAGTAACATTGGCAGAGAGGTACAATATGTTATCCCTATGGTGAAAATAAATTCGTTTGTTGTACATAGTTCCTCAATCTCTGAAGTAAAGGTATGAGTAATATAGGGTATAAGTGGTTTAATCAAGGCTTTATTTTGGAAGTAAGAAAAATGGCAGTGATTATTAAACTGCTATAGTCCATAATTTGGGCTTATTGTTTGTACATTATCAATTTTTTCCAAATAGATGACACTCTGTTACTTCCTGCTAGCCATCAGCATGAGCCCTACTGCCTAAACACTATTTCATTTATTTATGTTTGGAAAATCCATAAACATTTTTGTTTGCAATTTTGTTTCTTTTGTTATGTTTGAAGTCAAGTTTGAATGTTATGATACTTTTAATTGAAAAACTTTTGTCAAGTTTTTTCTTGTAAATTTTCTTTACTTGTAAGTATCATCTTGTCCTACTATCCTGTACCCTAAAATAAGAAATACATTTTTGACAGAGGCTTAATGTTTTAACAAAAGAGTGTGGACATTTTTATTTTAAATTTTAGGCAAAAGTACACTATAGAACGGTATGTTTGCTTATTTGTCTCACACAGCCATACAGGTTTTTTTTTCTAGAGGGATTTGTTTTGTTCTGTTTTGTTGTTATTTAAGACTTCACTTACAGGTAGACAACATTTTTCTATAGAAAAAAAATTGTTTGAAAGGTCCAACTCTCAGTACCATGTAAGTTAATGATACTGCAACTAGGTTCTCTTTTTAAAAAGCAATTAATGTATTTTATAAATTACCTTTTCGCATATGCAAAATCTGTTTCTACTACAATGTTATTTTTACTAATGCCTGTTGTTGCACTCTATGACATATCCTACAGTGAATATATGAATCAATTTGGGCTTAAAAATGAAAGCCAGTTGGCTGAAAGGTTTGAAATATGTACCCCAGCAAAACCATCCAATCAATAATTGGCAGATAATATTTTAAAAATTGTTTTTAATCTCTGTATAGATGAAATTTTGTAGCTTTGTACATGTTGTTAATTAAGGGCATATAATTTTACACTCTAAAAGTATAATTGTTGAACTCAGGGGTGGGTAGACTTCAAAAATACGTCTGCTGTAGAAATTAACTTGAAAAAAATTTTAAACTATGGCCAGCCACCAAATTGTGGACACTGTTTATACTGCTAGTTATTAATAGCAACTACCACGGTTCAAAATTAAAAACATTTTTATTCTGTCTTGCCTAGATGTATGTAAGTTCTCTCAGCAGTCTCTTATCAGTCCTATTAGTTGGCCAGTTTAGCTAAGACAAAAAAAATGTTTTTTGGAATGCTTTGAACTGCTCTTAGTTTTTAACTGCTTTTTAATATGAAAATTGCAGCTGTAAATGATGTATTTTTCATATTTTACATAACTGCTCTAAACTACTGACTGATTCACTTGGTCATTTTCCTGGGTGGGGTGGGGGAAATCTCTCTCCATACTGCTGGTCCTCTTACTAAAATCCTTTTATAAGGAAATGACCTGTGGCATTTATTCACCAAAGGAATTAATATACCAGGTCAAAGGATAACATTGCTATCATATAGATTAATAGGTCATATATAGTCTCAATTGAATTTTTTAATATGAATAATAATATTTTAACATACCTCTCTCTCTGCATAGAGATACCATAAAATAAATTAAGATGACGAAAAGGAAAGTAGAGGAGAACCAAATAACTCTGGTACATTTTATGGTTTAAGGGAAAGAAGACAGGACGAAATATTCTAAAACATAGATGCACCAACCATTCAGAATTTGCAGTCTGATAACACCTGCGTTACTTCCTTGAACTTTAGGAATCACTGAAAACTCATGTGCACTTAGATTTAGTTAATTTTAAATATGTTACATTATTAAAAGATGTAAAGATGTTTACCTAAGTCACTGCTCAAGAAGGGGCAATTACCGACTTTGTAATAATAAAAAGAATATTTCTCTGTAATACGTTGTTGAATAACAACCAGAATACCAAGCAAGTGTGTACATAGGAACATGCTACTTCCCTCTTGCCCGCATTCCCTCTGTGAGGCACTGTCTGCTGTAGAGCTCTACAGAATTAGACCTTCAGATTTAGACAGCATGGACTCTCTTCCTTTTTATTTATTTATTTATTTATTTTAAGGCCATTTTTCTGGTTTGCCAAATTCTGTTAAGGCAGTGATACATTCAGTTCCTTATTTTGCATGCTTAGATCACAAACTTGGTGCCCTTTCAAAAAATAAAAAGTCAAGTAGGTAATTAATGCCATAGATTTTAAAGAGAGAAATGGTTTTCAGTTTTTTAAGATAAATTTTTAAAAACAAATTTTATGGCAGTTCTCTTAAGGAATTTAAATTCCTCCTTTTTAGCCAGCAGGGAAATAAGACTTTTTTTTTTAATCCCTGGAAGAAAATGCTAAAAATAGCTTTTATATACAGTTCATCTGGAGAAAGATCTTGATCTTTATTGTTTTGACTAGGTATATAAATATTTGGTACAAAGTAATGAGAATAGTTAGCTACTTTTTTCCCTTTTGAAATTTTAACTATATGCAAAAACATATATCATTAGATTCCTGTGGTGGATAATAATTTCTTCAGATTCTAAAACAGGTATCTAGTGACTGCTTAATTGTTCCCAGGTTGCATCAAAGATAAATTGAAATGAGTAATGGTATGAAAATGGTATGTAACCACATATTACTTGTTTCTGGTAATCAAGTCTTATTTTTTAAAAAGCCTATTGTTTTTGAGAATTGAGACATTTAAAACTTGTTAAAGCTTCTTCCTAAAAATAGAAGAGAAGAGGAGGTACTGTGTGTTTAAAAAAAAATTTTTTTTTTTAATAAAGAATTCGGTGTCACTAGTTCTCAGCCTTTATGGTTACTGCTGCTTATATTTCTCCATCTCACTTTTTTTTAGTTTTTTGTACATATTTTAGCTGAATGCATAAGGTTTGTAACTTGTGTATGCACGTTTATTTTCAGAAAGAGCTGAGGCTTGACTGAATGTCCCTTTGAGGATTCTTTGCTACCAAAAGCCAGCTGCTGCACTATTCTTTTATGCTGATACCTTTGCATAATTAAGGTCTGTGAAGAAGGTGACTTTAATCCGCACCTCCTGGCTCTAGTCCTCTTTGCAGTCTTTGTTTTTATTCCTCCTTTATTTTTCTACCTTCTCATCTCACAGGTATCAGTGGATCAGTCTTCAGTGCCCCTCTGACCACTCAGTTTTTCTCCCCTATTCCCTCCCTTCTTTCCTCCCTTCCCCTTTACTCTCCCTCTCCCATTCTTGAGAATAGGAAATCCAGAGGGTTATTAAAATTATATCCAAAAAAAGTTTTAATAAAAAGACTCCATCCTACAAAAATTTCTGATAAATAATTTTAGTCCATCAGTAGATGGCTAAACTTGTTGAATAATTGCTTGATAAATACGCTGTCAGTTAGCTCTAATTTAGTTCTTAAATACTGATATTGAGGGAATTTTGTTTACTTTCTGGATGTGACTCTCTCAAAGCCTTTTTTTTTTAAGATTTTTTTTTGATATGAACCATTTTTAAAGTCTTTTTTGAATTGGTCACAATACTGCTTCTGTTTTATGTTTTTTTATTTTTTTGGCCCTGAGGCACGTGAGATCTTAGTTCCCCAACCAGGGATCGAACTCACACCACCTACATTGGAAGGTAAAGTCTTAAGCACTGAAACACCAGGGAAGTCCCTCGAAGACAAATTATTGCCCTAATGAATTAAATTACTTATTTTGATGAACATGCTTTTCCTTTTAAGTTTTTAACATTTAATGATTAAATGTTAATCATTTTTGAGAGTTGGATGGAACTATTTTTTAAAAATAATTTGTGGGAGATTTTTATCTTCTCAGCAGAATTTAAAGACAGACTTATATACACCCTTATCACTAAGGTCCATGGAATCTAAATTTGTACTTCAAACTTAGATCTCTGTCCTTCAAGTTGAAGTTCTAGTTCTGACTGTGCTCCTGATAATTTAGATTTTTTTTTTTTAATTTCATTCTCTAATGGTAGTATTGCAACTTTTATTTGGGGTTGAATCTCAAAAATTATTACATGAATATCTTTTTTATAAAAAATTTTTTGTTAGTAAAACAGTGTGATATCTGAAGCTATTTTGACTGTGGCAGGAATGTCTGAATAGACGTCAGTACATCCTCACGTACCAGAACTCGAGTTTTGCAAGTTCAATGCAGTTGATTGGAGAAAGGAGAAGCAGTTCTTGTTCTGTTTCTTGGTATACACATCATCAGGGGTTTTGAGAAAACTGCTCCTACAATAATTCTCAGAGCTGTTTTCTCAAAGGCAAAAGTGTGGCTTCAAAACTCACAGGGCTTTGGTTTGTCAGGTGCGACTTGTCAGATTTCATGGCACATCAAATAATTGAAGAATCCTGCCTCTCTAATTAAAAACCTGAAACAGGGCAAACAAAGAATTTGGTAGATTGTTTCAGATACCTAGAAATGCAAGTCTCTTCATGGTTAACCACAGATTGTTTACATAATGCAAATTGTTTGTCAAGCTCAAGGTAACACAGTTATTTGAATAGATTATTAGGTCAGTTATCTAGTAGCCAAGAGTTAGATGCATGTTCAAGTTATAATGAATTTTTTATTTTTAGTTGGTACCATTTTTCTCTAAATATTCAGAAATACAAATTGTGCATTTTATTAATAGGAATGAAAGCTCATGCTGGAAGATTTGCATAGGGTGGATGTATATATTTTATAAAATCAAGTTGTAAAATATGTAAAGCTATTGCTTTTTAAATAGAATATAAATGTTGACAGATAAATCTATATATTATATATTTTTAAATACATGTATGAAACTTTTGTTAGTTGAATATAAACTACATTGTGTGCTTTATGGAACTCAGTAACTTTTAATAATAAAGCAGTTGTCATTGATTTCTTTTTTTGTAGACTTCAATGCTAAATTGGATAGATATTAAAACTTTTTGTAGTTTATAATAATGTGAAAAATTACATAGTAGTTCCCCTTTGCAAAAGACTGTGATCTTTAAAAGATTATGGAGATAGTAATGTGTCCATTTCCAAAATGAATACAACAGAATGAAGATAGTCACTAAAGCACTTTGTTTATTTAAAGATCATCTTTGCTTATTAGTGTAGCCTAGTATATTTGAGTGATTCTTCATGCTTCAATTAATTAAGTCCTGGTTAAAGACTGGGCATTTTCAGAAAAGATGGAAATTGAGACCAGACTTCGAGTTAATCATGAGTCTGGTGCTCCTGAACTTCAGGCTGGATATGCTGTAAAGAACTTGCAGATACTTTACCAAGTGTACAGACAGATCAACTAACTTATATAACTGAGGGGCTCCTGAAGCTCTGAAAAGAAAGAAATAAGCAGAAGGGAATATCTCCACATCTCAGATATTCCTGGCAGGAAGAAATTCAGTGTGCCCTGCTGCTAGTCTTAAGTTTTCTTTGCACAGGAGATCTGCTTGCCCAGGAACACCGTACTCCTCCACTGGGGCAGCCAGGCTACCATAAAGCTCTTTTATCTCTGCAAGCTGTTTCTACAGCCCCAAACAACTAGATGAGTAGCTGATTAGATAAATGCAAGGTTTGTCTTTGTACTTTGATGGCCCTCTCTTCC EMBV3_39019 CCCTTCCTTGTCTGTCAGTACGAGATGTCACTGGGGAGATATATCTATAATCTAGAAGTA Gene GeneID:407157|AGTR2:XM_002699453:5_cdna Constitutive 0 NULL GeneID:407157 X GENE AGTR2 at2 angiotensin II receptor, type 2 EMBV3_28095 GCAGAGCCTGCCAACAGCCCAGCATCCTCTGCTAGTCTCACCCAGTAATGGTTTAAATCT Gene GeneID:508963|LOC508963:NM_001100328:11_cdna Constitutive 2 NULL GeneID:508963 20 GENE LOC508963 NULL hypothetical LOC508963 EMBV3_43318 CACCTTACTACTCTGTTTTCTGAGAAATACCTCATATTCCCATGGCAGACATTTCAGCAC Gene GeneID:527592|HSD17B11:NM_001046286:22_cdna Constitutive 1 NULL GeneID:527592 6 GENE HSD17B11 MGC137132 hydroxysteroid (17-beta) dehydrogenase 11 EMBV3_38233 CCCGGGAAACCTCATCTGACCCCTTGAGCTTCATGATGAATCACCTGAATTCTGTTGGTG Gene GeneID:534389|MGC143209:NM_001102171:26_cdna UTR3_Alt 2 NULL GeneID:534389 20 GENE MGC143209 NULL hypothetical LOC534389 EMBV3_28274 ACCTGTTCATCCGAACATAAAATTAGATACAGACTATACTGCATATCTGGCTTCCCTGGT Gene BVT0102_378960 - 1 EMBV3_08945 GK000008.2:49307582-49354206 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225273 TCONS_00225274 1 XLOC_137714 NonCoding TCONS_00225274 XLOC_137714 NonCoding NonCoding - 8:49316825-49320045 - TSS168700 1456 2 TCONS_00225274_1 56 0.485576923076923 5 0.54923889406648 0.000392334673374504 5.50655580753986e-10 1.71025644735118e-05 0.00126167835234196 3.04493522086437e-10 5.94490902269475e-06 1.18408756526081e-28 4.23853952151527e-05 0.00023136350681258 0 0 0 1.85236037020862e-37 0 0 0 0 0 0.000490032030791314 0.000531205961124782 1.13519608604413e-08 0 0 6.72392965496207e-11 7.95054477568988e-05 0.000710230769523728 0.000294612200138851 0 0 0 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 3e-117 426 93.64 0.192994505494506 0 noncoding 1 0 1 1 -0.333701900331856 0.112848751691494 -0.0120327583915493 0.81587403212937 GGCTAAGAAAAAGGTGCTTGTTTGTGCTAAGTCACCTCCGACTTTTTGCAACCCTATGAACTGTAGCTCACCAGGCTCCTCTGTCCACGGGATTTCCCAGGCAAGAAGACTAGAGCGGGTTGCCATTCTCTTCTCCAGGAGATCTTCCTGACCTAAGAGATCAAATCCAAGTCTCTTAGGTCTCCTGCATTGGCAGGTGGGTTCTTTACCACTAGCGCCACCTAGGAAGCCCTAAGAAAAGGGTAAAATAAGGGGATTCAAACCCAGAAGCCAGCAACAGTCAAGAGAACAGTACAGTAAGTGCAGTTATCCAGTGGGACCGTGGAGAAATGAGCTCTGTCCTGTATTTAGGGAACGTGAATACTCAGTTCTTGCTAACTATTGCAGACCTCTGGCTCCCAGATCTTCTGATTTGTCAAAGATAAGCTGGAAACCTGGACTTTCATGCAGTTTTACCTGAAATCAACGTTGCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTTCGACTCTGTGCGACCTCATAGACGGCAGCCCACCAGGCTCCCCCGTTCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGGGAAGTCGCTTAGTCGTGTCCGACTCTTCGCGATCCCATGGACTACAGCCTACCAGGTTCCTCCATTCATGGGATTTTCCCGGCAAGAGTACTGGAGTGGGTGCCATTGCCTTCTCCGAAATCAACGTTAGTTCATGCAAAACCTGAAACTATTATCATACTACATTTTAGGTTACCTCTTCCTGCTAAAACTGCCTATGTGACTTGATTTTATTAAGAACTATTTCACTAGCTATAAAAACAGACTACAAACCCCCCTAAAACTCATCTTAAAGCCTAGTAGTCTAATTTTTATTTTATATTTTATGGTTTTTACTTTATATATTCAATTTAACTTTTTTATATCATGATATATTCTCAAGGCAGAAGTAAAGAAGCAAAAACAATATAGAGTTTGGAACCACTCTATAGAGTCCTATAACTTAGAATTCAAATTTAAATTTAAAATAGAAAAAAAGGGAAACAACAACAACAACAACAACCCAGGATTCTCTGAGACAGGAAATATGTTAAGGAAAACCAATGGTTAGCCCTAATGGGCTGAGGTATCCAAAGATGCCACTCTGGCTTAGAACGTGGTCTTTTCATAGGTTTCCAGCTTTATCTGCCCTGTTTCTCTTGGAGTCTCCATGAACTTCTCATCAGCCCACACATCAAGCCCTGAATGGAGGCAGATTCCCTACCATATGAGCCACCAGGGAAGCCAGATATGCAGTATAGTCTGTATCTAATTTTATGTTCGGATGAACAGGTAATTTGGTTTTGCATAATTTTGACTTATGGGAAAAACGCCAGTTCCAAATAAAAATTTTCTCTGTTCCTC TCONS_00225267 TCONS_00225268 TCONS_00225269 TCONS_00225270 s 3' 9100 TCONS_00225267 TCONS_00225268 TCONS_00225269 TCONS_00225270 s 3' 9100 EMBV3_23084 TTCCCTGGGGTTCTGGACGTTCTGATGGGAGGTCATTGTGGTCAGCAGGGAGCTATTCTT Gene BVV0102_178934 + 0 NULL GK000017.2:17517847-17575018 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074976 TCONS_00074973 TCONS_00074974 TCONS_00074977 TCONS_00074975 TCONS_00074978 1 XLOC_046465 Coding TCONS_00074973 XLOC_046465 Coding Coding CLGN 17:17572743-17588851 j TSS56665 2561 5 TCONS_00074973_5 54 0.18313158922296 3 0.841187061526045 4.106936627351e-09 0.000217217312664753 5.27425920290564e-05 0.000212822699460096 0.000514710737771506 0.000187313706932742 4.33117913015515e-05 0.000168624051185943 0.00045636267898762 8.27820454885348e-05 9.90890549133845e-10 9.66433712024632e-06 3.44576939479641e-05 2.71243828621855e-05 9.2452379125951e-60 2.5790146330529e-17 0 0 0.000761356612414934 0.000356612243348743 2.70232193054349e-07 8.42896890385752e-29 5.92813368428173e-17 4.49121914518743e-199 0.00028719793934238 3.67558967226913e-05 0.000143478801968078 1.02909998361581e-26 7.22592314912935e-97 0 NM_001034205.2 CLGN Bos taurus calmegin (CLGN), mRNA. 3e-126 457 100.00 0.0983990628660679 NM_004362.2 CLGN Homo sapiens calmegin (CLGN), transcript variant 1, mRNA. 1e-87 329 89.37 0.0987895353377587 TCONS_00074973_5 sp|Q3SYT6|CLGN_BOVIN CLGN_BOVIN Calmegin; 5e-23 92.4 100.00 0.796296296296296 0 coding 0 0 0 0 -0.1325175700049 0.440860397856299 0.00383948002994272 0.946672644121722 TTTTGTTTTACTGATATTTTCTTTCTGAATGCTTAGATAAAAATGAGTGATTTCTTAGGGTAATACAGTTTACCTGAATTGATAACAAGTAGAGACAGAAAATGTCAACCATGATACCAAGAATGCCCACTTCCTTGGCTTTCATAGTGTCCATTAGTACTTCTCTGATGAAACTTTCCTTTAGGAAAAATGAATGGCAACATACTCTGTCCCAGCATTTTGTCCATTCTATTATGTAACTTATACATTATTGGATATTTAATTTGATAACAAAATTATAATGGAGTAATCTTGGATCAGGCATACAAAAATGGAGTTGGGTGGCCAATGAGGACCAGGTCTCAGAGAAGTCTCTGCACCACTGAGAACCTGAACTTTCTTTGAGCTATGCCAGACTCAAGAACACCACCAGCTGTATTCAAAACAACACCTGTCAGCTGCAACCTTATGGTCTCAAGTTCTCCCCTTGTAACTATGCAACCATTTGGGACCCCCACCAATCCTCACTTAATAAGCACCCTTACTTCTTGCCAGCTCCAATTATAATTCTTGATAACCACTCAAGTAACTTTAAGCATTCGGTTTTTGCCTTTATAAGCCTCCCTCATTTTGTAGTCCAGCAAAACACAATTCAGGTAGTTCTTGAGTCTGTGTCTCCAGGGTGGAGTCCTAACAGACCCCAGATAAATGCCTTTTTATCTCAGTTGGGTCTCTTTCTAGAATGGTGGTCAACAGATTATATGTCTGTTTTTCTAAATATATTAGCTATTTGAAAGCAGAGCTCATATAGTTGTGATCTTTGCATTATCAACATTTTCATAGTTTAGCAGGTAGAAGCTAAATATTCAGTAAGTGTCTGATAAGCCTCTCAGTACGAGGAACATGGAAACACTTTAGCTTTTCATTCTGAATTCCTATTAAAATAACAAAATAGATAAATAGGTACTCCCTCAAACAACATTCTAAACTGAGAATAAGTATTAAGCATATATCTGAATCTTGGAGTTTTTAAAAATCTTTACATCAATGGATCAGATTAAGGGCTCATTTAGCTTAGATTCCTTGTTCCTAAAGTTTAAGCTTTCAGCTTCTTCATTGCAAACTTTGAGTGGATCCTTCAGAAATTCTTTTCTAACAAGTCAAATTCGTTACCGGTCACAGAATTGTGCTGAATAACAGAAGTTGCAAAGCCTAAGAAAAGAAGAGCATAATACTGTTAAAAGTACCTGGAATAAAGTTGACTTAAAAAGTTGTTTCAAAAACCCATAAATACCATCCAAATACCAAAAATACCATCTTTGACACAGAAGATGACAGTGTCAGAAGTCTAGATATAGTGGCCTTATCGCGAATACAATGTGAAAAATGTTCAGTGATCTTTATATCTAGCCAGTAATCACATTTTATGCATGGAGCTCCATCAATTCCCTTAATCTGAGACTCTTTAATAGAGATATCACAAGTTAAATATTTTATTATTACAATAAAATTGAAAGCATGATAATACCAAAATCAAAGTCAAAATTTACTACCAAGAATAAGCAAGTAAGGGCTGTATGATCCAACATCTATGGGGCAAAGAAAGTTGTGATTCACTATTATGTTTATGCTATATTTTAACTTTTAGTGAGTTAAAATGACAGGCTTTGGAAAAGATTTGAACTCCATTTACACCATTAATACTTAAAGCCAAAGGCAAGTAATTATCTTCCGTTTTTTTCACCAGGGTTGTTGGGACGTTCGATAACATAATGAATGTAAAACTGTTTAGAGCGCAGTAAACACAACGAAAGATGAACAATTCTTTATCAGTAGCATTTCAGAAAGAAACCATGCAGTACTCTTTATTATGTTAATATTTAATATATCTCTATCATACACTTTCAGGGAAGAATAGCTCCCTGCTGACCACAATGACCTCCCATCAGAACGTCTAGAACCCCAGGGAAGGCCTGGGGTACTAACTGGACGCTGTTAAAATGTGATTTACTCAAAATTCAGGGCCCAATTACGTGCGTTAGGAGGTTGAACCTCACTGCTCGCAGAGAGCAGGCGCTCTGCGGAAAGGAAGGGTCTTCGGATGGTTAGCGAGGAGTTCCTCCCAGGCCATCCGAGGAGCCGGATGCACGCAACAACCGGCCGGTGGGGGCCGCGCGGCGCGTGGTTGGGAAGGTCCCTCTGCGGCGGTTGAGCCCCTCGGTGCAGGTGCGCGCAGCACGCGCCTGCGGCCGCCGCCTCTTCCCCGCCCGCGGCCGCACGCGCACGCGCGGTTAGCAGTCGCTGCTGCGCGGCCGGCGGCTGGATTGAGCTGGGGGAGACGCGGGGACCAAGTGGCAGCGGCTCGGACATCTGAGCTGCCACTCCCGAAAACGGGCCCGCAAGACAGATAATCAATATGCGTTTCCAAGGCTTTTGGCTATGTTTGGGTCTTCTTTTCATCTCAGTTAATGCAGAATTTATGGATGATAGTGTTGAGATGGAAGACTTTGATGAAAATTCAGAAGAGACTGATGAACTCTCCTCAGAGAATCCTATCAAGGCCTTGTCCACTGCATTATGAG EMBV3_03360 CTTGGTTTACCAGGAAGGCCGTTCTATAGGCACATCATCTTTGCTCCAAGCAGCCGCAAC Gene GeneID:536439|NAALAD2:XM_002699027:18_cdna Constitutive 1 NULL GeneID:536439 29 GENE NAALAD2 NULL N-acetylated alpha-linked acidic dipeptidase 2 EMBV3_19616 CACTGCTATGTGATCCAATCCCAGATGACCCCCTAGTACCAGAGATTGCACGGATGTATA Gene GeneID:100336417|LOC100336417:XM_002692224:1458_cdna Constitutive 0 NULL GeneID:100336417 13 GENE LOC100336417 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_22810 GCTGATAATAGTTTATGATTGTTTGTGGTTTCTCTTTTATCTCTTGATCATTTTCAGCAG Gene BVV0102_329625 - 1 EMBV3_41519 GK000007.2:43581052-43593792 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11433 CTGGCTTTCACCTTCTCTGGATCTGGTGTGGCCCAGAAAGTTACTCAAGACCAGCCAGAA Gene GeneID:100298572|LOC100298572:XM_002690553:123_cdna Constitutive 0 NULL GeneID:100298572 10 GENE LOC100298572 NULL hypothetical protein LOC100298572 EMBV3_13425 AGAGACAGGCCTTGACAGACTCCAGGGAATATCTGTGTTCAGGTGAGCAAAATGCCGTAC Gene GeneID:513835|RBBP9:NM_001083424:46_cdna Constitutive 1 NULL GeneID:513835 13 GENE RBBP9 MGC143365 retinoblastoma binding protein 9 EMBV3_28107 TTCTGGAAACCTGAAGTATCATGTTATAAACGGCAGTCTCACACCAGAATAGCAGTGCCC Gene BVT0102_375175 + 0 NULL GK000009.2:18703197-18745015 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236704 TCONS_00236701 TCONS_00236708 TCONS_00236705 TCONS_00236707 TCONS_00236700 TCONS_00236706 TCONS_00236698 TCONS_00236702 TCONS_00236699 TCONS_00236703 1 XLOC_144555 Coding TCONS_00236698 XLOC_144555 Coding Coding PHIP 9:18740306-18797019 j TSS177139 8710 1 TCONS_00236698_4 1201 25 0.84685780787135 0.000122654610780991 1.30532118063728e-20 3.92552489807368e-05 4.43658888609671e-05 3.13598934892056e-41 3.97376332076914e-05 3.31511891602903e-05 3.90726545976756e-05 4.459230892007e-09 6.44146902033729e-05 2.22391353866681e-05 2.78859597264845e-05 2.77694341260864e-05 2.63366462153742e-13 9.5239646234526e-05 0.00258794294460719 0.000593684656468644 0.000502879517296025 0.000192693532661967 4.62393943099631e-08 7.42107450138092e-05 0.000485647277607869 0.000851685435558087 0.00225790728050281 1.23985329197666e-23 8.87599444212739e-05 6.80759377241124e-06 2.63095561631244e-19 0.000228542519497296 0.000134950054886368 XM_601481.6 PHIP PREDICTED: Bos taurus pleckstrin homology domain interacting protein (PHIP), transcript variant 1, mRNA. 0.0 9914 100.00 0.630998851894374 NM_017934.5 PHIP Homo sapiens pleckstrin homology domain interacting protein (PHIP), 0.0 6349 86.01 0.635246842709529 TCONS_00236698_4 sp|Q8VDD9|PHIP_MOUSE PHIP_MOUSE PH-interacting protein; 0.0 2134 87.37 0.999167360532889 1 coding 0 0 0 0 -0.0787445292880467 0.520234466514843 -0.0299564984380982 0.692032802023887 GGGAGAAACCCATTCGTTCTGGATTAATGGAACTGGAAAACAGAAAACAATTATCAGATTGAAGGCCAAGGACATGGTGCAGTATTTGACTGCAAATGCTCTCCTGATGGTCAGCATTTTGCATGCACAGACTCTCATGGACATCTTTTAATTTTTGGCTTTGGCTCCAGTAGCAAATATGACAAGATTGCAGATCAGATGTTCTTTCATAGTGATTATCGGCCCCTTATCCGTGATGCCAACAATTTTGTGTTAGATGAACAGACTCAGCAAGCACCTCATCTCATGCCACCCCCTTTTTTGGTTGATGTTGATGGTAATCCTCATCCATCAAGATACCAGAGATTAGTTCCTGGTCGTGAAAATTGCAGGGAGGAGCAGCTCATCCCTCAAATGGGGGTAACTTCCTCAGGACTGAATCAAGTTTTAAGTCAGCAAGCAAACCAGGATATCAGCCCACTGGACAGTATGATTCAAAGACTACAGCAGGAGCAAGACCTGAGACGTTCTGGTGAAGCAGCTATCAGTAATACCAGCCGTTTAAGTAGAGGCTCTACAAGTTCTACCTCAGAGGTTCATTCACCACCTAATGTAGGACTAAGGCGTAGTGGTCAAATCGAAGGTGTACGGCAGATGCACAGTAATGCACCAAGAAGTGAAATAGCCACAGAGCGGGATCTTGTAGCTTGGAGTCGAAGGGTGGTAGTACCTGAGCTATCATCTGGTGTAGCCAGTAGGCAAGAAGAATGGAGAACTGCAAAGGGAGAAGAAGAAATAAAGACTTACAGATCAGAAGAGAAAAGAAAACACTTGACAGTTCCGAAAGAGAATAAAATGCCCACTGTCTCAAAGAATCATGCTCATGAACATTTCGTGGATCTTGGAGAATCCAAAAAGCAGCAGGCAAATCAACACAATTACCGCACAAGATCTGCATTAGAAGAGACTCCTAGACCTTCAGAAGAGATAGAAAATGGCACAAGTTCTTCAGATGAAGGTGAAGTTGTTGCTGTCAGTGGTGGAACGTCTGAAGAAGAAGAGAGAGCTTGGCACAGTGATGGCAGTTCTAGTGACTACTCCAGTGATTATTCTGACTGGACAGCAGATGCTGGAATTAATCTGCAACCACCAAAGAAAATTCCTAAGCATAAAACCAAGAAAGCAGAAAGCAGTTCAGATGAAGAAGAAGAATCTGAAAAACAGAAGCAAAAACAGATTAAAAAGGATAGGAAAAAAATAAATGAAGAAAAGGATGGACCAGTATCACCAAAGAAAAAGAAGCCCAAAGAAAGAAAACAAAAGAGATTGGCTGTGGGAGAACTAACGGAAAACGGTTTGACGTTGGAAGAATGGTTACCTTCAACATGGATTACAGACACTTTACCCCGAAGATGCCCATTTGTGCCACAGATGGGTGATGAGGTTTATTATTTCCGACAAGGACATGAAGCATATGTTGAGATGGCCCGGAAAAATAAAATTTATAGTATAAATCCCAAAAAACAACCATGGCATAAAATGGAACTGCGGGAACAAGAACTGATGAAAATAGTTGGCATAAAGTATGAAGTGGGATTGCCTACCCTTTGCTGCCTTAAACTTGCTTTTCTAGATCCTGATACTGGTAAACTGACCGGTGGATCATTTACAATGAAGTACCATGATATGCCTGATGTTATAGATTTCCTTGTCTTGAGACAACAATTTGAAGATGCAAAATATAGGCGGTGGAATATAGGTGACCGTTTCAGATCAGTCATAGATGATGCCTGGTGGTTTGGAACAATTGAGAGCCAGGAACCACTTCAGCCTGAGTACCCTGATAGTTTGTTCCAGTGCTACAATGTTTGCTGGGACAATGGAGATACAGAAAAGATGAGTCCTTGGGATATGGAGCTTATACCTAACAATGCTGTATTTCCTGAAGAACTAGGTACCAGTGTTCCTTTAACCGATGTTGAAACCAGATCATTGATCTATAAGCCTCTTGATGGTGAATGGGGTTCCAATCCCAGGGATGAAGAATGTGAAAGAATTGTTACAGGAATAAACCAGTTGATGACACTAGATATTGCTTCAGCATTTGTGGCCCCTGTGGATCTGCAAGCGTATCCTATGTATTGCACTGTAGTGGCATATCCAACGGATTTAAGTACGATTAAACAGAGACTGGAAAACAGGTTTTACAGGCGAGTTTCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATAATACACGAACATTTAATGAGCCTGGAAGCCCTATTGTGAAATCTGCTAAATTTGTGACTGATCTTCTTCTACATTTTATAAAGGATCAGACTTGTTATAACATAATTCCACTCTACAATTCAATGAAGAAGAAAGTTTTGTCTGACTCTGAGGAAGAAGAGAAAGAAGATGCTGATGTGCCAGGAACTTCTACCCGGAAAAGGAAGGACCATCAGCCTAGAAGAAGATTACGTAACAGAGCACAGTCTTACGATATTCAAGCATGGAAGAAACAGTGTCAAGAATTGTTAAATCTCATATTTCAATGTGAAGATTCGGAGCCTTTCCGCCAGCCAGTAGATCTTCTTGAATATCCAGACTACAGAGACATCATTGACACTCCAATGGATTTTGCTACCGTTAGAGAGACTTTAGAGGCTGGGAATTATGAGTCACCAATGGAGTTATGTAAAGATGTCAGACTTATTTTTAGTAATTCCAAAGCATATACACCAAGCAAAAGATCAAGGATTTACAGCATGAGTTTGCGCCTATCTGCTTTTTTTGAAGAACACATTAGTTCAGTTTTATCAGATTATAAATCTGCCCTTCGTTTTCATAAAAGAAATACAATAACAAAAAGGAGGAGGAAAAGAAATAGAAGCAGCTCTGTTTCCAGTAGTGCCGCATCAAGCCCTGAAAGGAAAAAGAGGATCTTAAAACCCCAGCTGAAGTCAGATATTACTACCTCTCCATTCTCTGCACCTACACGGTCAATACCACCAAGGCACAACACTGCTCAGATAAATGGTAAAACGGAATCCAGTTCTGTGGTTCGAACCAGAAGCAATCGAGTGGTGGTAGATCCAGTTACCACTGAGCAACCATCTACTTCTTCAGCAGCAAAGACTTTTATTTCAAAAGCTAACACATCTGCAATGCCGGGGAAAACAGCAGACTGTAGAAACAATGCTCTTGTACCTGGAAGCATTCAAGTAAACGGCCATGGAGGGCAGCCGTCTAAGCTTGTGAAGAGGGGACCTGGGAGGAAGCCTAAGGTGGAAGTTAATAACAGCAGTGGTGAAGTTACACACAAGAAGAGGGGTCGGAAGCCCAAAAAGCTCCAGTACACAAAGCCTGAAGTTTCGGAGCAAAATAGCGTGCATCCCATCAGGGATGAAGTAGTTCCTTCCTCAACCTGCAGTTTTCTTTCTGAAACTAATATCATAAAGGAGGATTTGTTACAGAAAAAGAGTCGTGGAGGCAGAAAACCCAAAAGGAAGATGAAGACACAAAAACTAGACTCAGATCTCATAGTTCCTACAAGTGTTAAAATGCTAAGGAGAAGTAACCGAAAAAAGACAGATGATCCCATGGATGAGGAGGAGGAGTTTGAGGAACTTAAAGGCTCTGAACCTCACATGAGAACTAGAAATCAAGGTCGAAGGACAGCCTTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTTGAAGACACTTCTTTGACTTTTGGAACCTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAAGCTAATTTAATTGGGTGGTAACTTGCACCAAAATATTTTACTTCAAAATCTATAAAGCAGGTACAGTTAAGGAGTATGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTATGACGGATATGGGAATGTTATGATTTGATTTGCAAAAAAACAAACTTACAAGACGCTTCACTTCTTTAAATGAATATATATATATAAATATATACATATATATTTTAAATGTTTGCTATTTATTGCCCTTAGATAGGTTATGCATTTCAACATTCATTTCATTTACTGTTCAAAGCAAAAGAAATTGAGGCTCTATAATGAACTCCCAATTTATTTCTGGAAAAGACAGTTCTGCTACACTCTTAAGGAGCGTATAATATTCCTTAGTGATAGAGCATTTTATGTTAAAATGAATTATTTTTGACCAAGCCAGGTACATTTCTGTTTATACAGAAGTCTTGCCCCTAGGAGGACAGGTGTTAACCAGAGTAGCAGTGAATTAAGAATTGTGTTTCCTCTAAAGATAAATTTAAAATTCCCACCATTTGATACCCTGAAAAGTTTAATTTTAATTATAGAATGTTCATCTACAGAGAATCTAGAGGAGGCTTTTGCTGTATTCCATTTCTGCCAAACTTAAGAGAAAAATGTACTGATAAAAAGGAAACATATCCACATTGGAAAACATTTGACTGTCTAATTTTTCAGACCTTGATTCTTATGTCAATCACTCAATCTCTGTTTATTGTGCCAAAGACTGAGAATCAGTGCAGTGGAAAGCCTGTTTTTGACTGTCAGGACAGCATACACTTTTTCAATATTGGAAAGGCTATATATTATTCTAAAGAGCAAGTTATTAAAGAGTTATGCTGAGATGTATCTTTTTTTGGTACTAATAGTAGAAAATAATGCACTGGTGGGTCCTTTGACAGAGATGTTTTAGAGAAAATGTTTAAGTGGTTAAAGGATTCAAGGAAAATAACAGGAAAAAGGTATGGGATTTGATGTTTACTTGTTAATCTGGATTAATGTCATTTCTAAACTTTAGACATATCTAATAGGCTAAAATGACTTACAAAGAAATGTGTCTGTGTGTGTATGTGTATATATTGACAAATGGGTATAATTGAATATATATACAAACACATACTTATATGCTATTACCCAGGTATAAATTCTTTTATCAGGATTTTTTAGATAGTGGTAGAATAAAAATAATTTTAAAAGGTCATACTTTATAGTTTAATTTTAAGGGGAAGATTGGTTATTTTCAATTATTAAAGGTTTAAAAATAGGCCAAATCACTTTTTATGCAATCATGTTTTATACAGTGGTCTCATTGCACATTGTGTTTTTTCTGCACTTTTTATGGTATCCTTCACGCTGGTATGTCAGTATACACCCAAGAAAAATTCCATTTAATGATTGTGCCTTGTATTCTATTATTTTTTGCATCATTAGTAAAATTAAGTTGTCTATTGTAAATGATAACTATATGACTTAGGAGAATGTATTGCTATATGTACTGCTATGGAAAAGGAAAGCAGTTATTTATTTGTTTATGGTACAGTTAGTTATTTTATACCTTAAAAACCGACATAAATACCATTTCTATTGTTTAAAGATTATTGTCCATTTTTTTAAAAGTTTAAAGAATGTAGTATTTTCTGAGGACTGGTATGGTACAAAAATGTAACCAAAATTTTCAGATACTACATTTTTAAAAAGCGAGGATGGGGAAAATATGTATCAGCATGGCCCTGGTGTAGAAGAATAATGTCTTTAATTGAACCTTGGCAAAATACATTACATAATTACTTGTGTAATATTTCTGGTAGGGATAAATGTTAGCTGTCAGTTGATTATGTCTTGAAAAAGAATGGAAAGTCACACATTTGGGCTTTTTAGATTGTTTGTAACTAAATTTGTACAGAAATTCTCCTGTGAAATTAAGTAAACCATTTTCCAGATCTTAACTGGATTGCTGTGATTTTGCAGTTGAAAATAATTTCAAATTTTTCAGGTTTTTTGTATATTTATTTTTTTCTAACAAATATATTTAACTATATAATTAAAGTTCAGTAGTTAAACTCTTCATAATGCAGAAATGGATGGCTTGGTTGTATAGTGAAACGAGTCTCTCAGTTACACCATTACTGGATATAATAGTGTGTATGTTTGAAATTTAAGTCATTAATTTGTTGCTTTTGAAGGCAATCTATTTGAAACATGTAATTTCCTGATGGTATCTGCATTGTATTAGAAAATAAGGCTATAAAATCCATTTTTGTAAAAAATATGTGTATAGTTTTAAGGTGTGTACAGAGAAGGGAAGAGCGTACACAGTCTTAGGAGTGAAATTCACTGCTAGTAGGGTGTATTAGTTCTAACACTTGAGCAAAAGAAACGAGTATTTACCATCTTACCTGCAAGAAGTAAATATTATTCCAGTGCATTCTAAAGGCACCATATACTTATGACCTTATTTGCATATTATTAGACACTGGTTTCCTAGGCAAAAATGACTTGGATCAGCTTCTTTGTAATTGAAACACTTAAAATGTATTAGTAATAACCAGATATATCTAGATTTTATATTTTTATAATTTAACTTCTATACACTGCAAAGTTGAATTGAGAAATTTAAGTTATCACCATAGTCTTGTTCTGTGTTGACCATTAGAAAAATCTCTTCTTGGAGTCATTTAACACCAGGTATATACTGTTTATAGGTCAAAGGAAATGTTGGCGGTTGTCTTAGGTGAGCAATAAAAGAATACTAAGTTTATTCAAAGTTTCAGAATACAACTTTTGGTTACATTCTTAGAAAAATTGTATTTTTAAGTACCTAACCCTAATACTATTCTCTCCTTTGACCCCAACATTCTCAAGTTCCAGTGAAATGTTATAAAATTAGAGAATGTTGTAGATGAGCAGATAAACAGTCTGATTACAGTCCGATAACTTTGGGCAGTAGAAATATACTTTAAAAAAAAAGTGTATTCTTTTCAGTCTACTATTATGGCATTGGACCATTTTATGCATATATTCATGAACTAAAGATTTGGCCTTGTTTTCATTGTTTTTATTATTGCACATCACAAATTTGAAGACTGATAGTATTGTCACAAAATGATCTTCCTCTTTAAATTTATTTAGAATAAATGTGCAGAGTATTTGTGAGCTTGCTTAGGTCACATCTGAGACATGAAGTTTGGCTGAATCTAGTATCACTTGGACATGAATATGTAATATACACTGATCAACAAAAGATCCTTGTAGCATGTATGTTAACATTTTAAACTCTTCCTTATCTGCAATGCAGTAGGTTAATCAGACATTTTAACAAAAGTATTCAAGTAACATTTTTAGTTTATAATGCTAGTAGCATTATTTACATGTTTTGATATATGATTTGTAATATAAATTAGCTTCTCCAGTTTATAGTGTTTAATTCTAGCATTCCATTTTATACATGCATATATACCTCTCTCTCAGATGTCAACTGGAAGCAATTTTGACTGTTTTCTACCTAATGAAGTCAAACTGTTATTCTGAATGTTTTTGTTCACCTGAAACTTATTTTTGAGTAGGTTGAAAGGACCAAGATACTTGAGTGTTAAAAGGGCTACAAGTGTCCTCTTTATATGCGGGAAATACATGATTGTAAAAGTCACAAAAGGGGAAGTACTTTTATGCTCTGTGGATTATCCAATATTTAGTTTTTTTAGATTGTTTTAAAACAGGTTGAGAAGTGGTTTAGTTAAATTTAGGTGACAATTTATTTTCCAACTAAAATTGAAAAATACACCTTTTCCTCACTTCCCTCCTTGCAGTTCCTCTCAGGTCCCAAGTTTCCAAGTGATTTGAACTAAATATTACATTTATTGAGAAGCTGTTTTTGTTCTTAATTATACTGAGCTAAGCACTCCAGATGGAAAGTCATTTTGTACTATGTACAATACCCAAGAAGAGGTCACATTGAGTCAGAAGACTGTAAGTACCACTTTTGACGCTCCAGATATTAACCTTGTACACACTGTAATAAAACAATTAGAAAATAATATGAGCTATAAATATATATATATTATTTTTAGTTTTGATAGCTCTGTGTTTAAATACTTTTTTAATGCAGATAAAATCATCAGGAAATTAACCTTATATGGCACAAACCAAATACATAATAGTGGGTGGCTCTGAGTTTCTACGTTTAAGGAGCTAAGAAAATAGGTTTGAGATGATAAATAGTACACACACCTATGATGCAGATGTACACATGCTCGTTACTTTTAAGATTGTGCTGTGTTGATTGATCACAATGAAATGTTATAAATTGAGACAAAATACAAAGTTACATTTTTGGACCATATTAAAACTGCAAGAAGATGGGGTCTTACTTAAAGATCTTTTAGACAACTGTTAAATCCTGTCACATGATATTTAGACGTGTAGAATGTAGCTCAATTTTTGAAAAGTAACTGACCTAGAGGGTTAATGTTGAAACTGACACATTTTCAAATTAAAATGCTTATTTTGTACAGAAAACAACGTTAAACACAAGCAAATCTGTTGTATGTAATAAGTAACAGAGTTTTAAAAAGAAATTAATTATTTAGCTTTATTGAGGTTTTTGGTTTTTCTTTCTGGAAACCTGAAGTATCATGTTATAAACGGCAGTCTCACACCAGAATAGCAGTGCCCTTTCTTTTTGTACATATTGATTGGACCTTTCTTTACTGTTAGGTGGACACTTTCTATGTTAGTTTTGAAGCATAATTCTTTGAATCCTTTTATACAAACTAGAATGTATGTGTAAGAATTCCTGTCCCTGCAATGTAGTAACTACAAACTTATTTTTAAATAAATAGAAAACTTGTTTTTCTAAGCTATTTTGTAGAGCCTGCTTTCTTTATTTTTATTTTGTAACACGAAAAACAC EMBV3_39145 TTAAAGATAGGACTAAAGACAAGGCCCAGGAGGCCCCATTCCTTGCCCAGCAGGAGAGAT Gene BVV0101_081494 - 1 EMBV3_10307 GK000004.2:108471247-108488347 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185276 TCONS_00185274 TCONS_00185275 1 XLOC_111547 Coding TCONS_00185276 XLOC_111547 Coding Coding NOBOX 4:108487390-108495206 j TSS137782 2725 1 TCONS_00185276_4 565 0.0697247706422018 8 0.65233525271913 0.000534562725444593 0.000510075480439488 0.000324730844687373 0.000562752371660977 4.05571686875887e-05 1.47138231751182e-05 5.33299916221707e-05 0.000409259990416586 2.4414073231923e-05 8.58835655677219e-05 1.06521783744516e-10 2.63489098547635e-10 0.000100220226508319 1.57255749230311e-05 1.89418798409813e-05 7.80822569436842e-21 0 0 0.000184485127834059 0.000636605123324229 3.80051961927178e-05 8.75014615115255e-34 5.41460139102831e-10 0 0.000673533940925758 0.000545415238468453 0.000560058281751396 1.10620974914229e-16 1.29585230265939e-10 4.63525887170518e-14 XM_606837.7 NOBOX PREDICTED: Bos taurus NOBOX oogenesis homeobox (NOBOX), mRNA. 0.0 3532 100.00 0.718165137614679 NM_001080413.3 NOBOX Homo sapiens NOBOX oogenesis homeobox (NOBOX), mRNA. 1e-170 605 72.80 0.372110091743119 TCONS_00185276_4 sp|O60393|NOBOX_HUMAN NOBOX_HUMAN Homeobox protein NOBOX; 0.0 616 59.97 0.978761061946903 1 coding 1 0 0 1 -1.57645391252136 0.0237683268973722 -0.00240265890075606 0.959098602237595 CACACCTGCCCGCGCGCGAGGCTTCTTTAGGCGGCGGGCAGGCGGGCGGCCCCGTGCGGGAGTCCAGGCCATGGAGCCCACCCGGGAGCGCGGCCCGGAGTTGCGGGGCCAGGGGGGTGTCCCTGCTGCCAGGCTGGAGGAGGAGGAGGAAGCCCTGCAGAGGTCAGCCCCCCACACTCAGGATGCCCCAGGCAAGGACGTGCCTATTTCCTGCACCATCTACGGGGAGAAGCGGCCGTCAGAGGCCCCTGGGGAAGGGACTGGGCCTATGAAGGCCTGCCAGCGCCCCAGCCCAGGAGCTCTCCACGAAGACAGGAGCCTGGCCTCGCCTAGACCCCAGCCTCAAGGGCAAGGGCCTCCCTTCCCGGGGACAGAGGGCAGGCTGGGGAAGAGGCCCTCTTCTCCAGCCACCGGCAAGCAGAAGAAGCCTAGGGATGTGGGTCCGGCCTCGACGGCATCTCCCAGCAGCGTTAACCCGGCTCGGGCCACGTACAACCCAGGGCCTTGTGGGTTAGGCCGGGGGTCCTGCCATGTGGCCAACCTCCTCAACACACTGGCCCAGAAGAACCAAAACCTGGACCAGGAGAAGAGGTCCCCGGAAGTGACCTGCCAGGTCCGGAAGAAGACTCGCACCCTGTACCGCTCGGACCAGCTGGAGGAGCTAGAAAGGCTCTTCCAAGATGACCACTATCCAGACAGCGATAAGCGCCGTGAGATTGCCCAGACAGTGGGGGTCACCCCCCAGCGCATCATGGTGTGGTTCCAGAATCGCCGGGCCAAGTGGCGAAAAATGAATGGGAAGGAGAGTAAGGACGCACCTGCCGGTCCCGCCCTTACCCCAGCCCCCGCCAGCAACCAATGCAGCTCTGTGGCCGAGCTGCCACCTACCGAGTCCACGATGCTGGAGCCTGGGACCCTCCCTCAGGATTCCCTTCCAGAGCCGTCCATGCTGCTGACATCTGACCAGACTCTGGGCCCAAACCTGCAGAATGAGGGCCCCCAGAGAAGGCCTGTGACCCCCCCACTCTTCAGCCCCCCACCTGTCCGAAGAGCCAACCTTCCCTTTCCCCTCGGCCCTGTGCATGCCCCCCAGCTGATGCCACTGCTGCTGGACACCCTGGGCAGTGACAGCAGCCACAAGGATGGCCCTTGTGGGTTGTGGGGAACAAGCATCACTCCACCCCCTGCCTGCTCATACTTAGAGGATCTGGAACTCCAGGAGTACCAACCCAGCAGCAGCCAGCCAGGATCGTTCCCCTTCTCCCAGGGGCCACAGACCCAGTTCTTCCAACACCCACAGCCCCAGTTTCCATACCTGCACCCCTTCCCTTTGCCCAGCTCGCTGACTCCACCACTGCCCGAAGACCCTCTCTTTGCCTTGTCCTGTGGCCCCGGCGGGGGCTCATCCCAGGGCTATTTCCCAGGCCCTCCGTCGGGGCCCGTCCTGCTGCAGCCGCCGGCCGGGAATGTGGGTACGGTGCCCTGGGCCGACCCCTGCCTGCCAGACTTGCCATTCCCCAGTGCCTTCTGCCCGCAGTCTCTGGGGGGCCCCCCGGGAGGGGACGGCTGCTTCCTGGACCTGTTTGCTGCCCCCTACGCACAGGCTTCAGGTAGGCTGCCTTCCCCGGGCCTCACCCAGATGCCCGAGAGCACCCCACCTGCAGCAGGAAAAGCCCCGCTCAGCCAGGCCCAGGAGGAACCACCGGCTGCCCCCGGGGAGCGGCCCCCGGCCCCCGAGGAAGAAGACAAGAGTGGCCATGGCCCCTAGTCATGGAGCCGAAGAACCAAGAGGCCGTCCTGCCGGAGATGGCTGGAGCACCCAGAGGAGACAGGGCTCGAAGTTGAAGGAAAGACTGGACTCCAGGGCTCATTTTGCCAAATGCTGACTTGAGGAGGAGGAGGCCTGGACCACCCGTCCTTCCCCCACAGCTCCGAATGGTGGTCCTGGAGAAATGGAGTGGGGCCGTGTCGCCTCTGACGGTTGCTTCCGTTTATGTTATTTGCTCTCCTTGCTCCACAGCCGCTCCAGTGGCCACCATAAGCAGTAAACTGCCTCCTCTTGGGTTTCTCTCTCTGTAGTGATGTGTCTCCCTTCTCACGCTAGTGAAGACCCCCCCTGCCCTTCATTGCCACCCACTCAGCTGGGCAGCTGTGTACTGAGAGGCTCAGGAGGGACTGACCCTCTGGGGCAGGATCGTGTGAGCCTGGCATCCTTCTGGGCCCCATCTCTCCTGCTGGGCAAGGAATGGGGCCTCCTGGGCCTTGTCTTTAGTCCTATCTTTAAACCATGTTCTCGTCTCAAACCCAGAAGTGAGCCTGAACAAACCTGAGCCTGGGACTTTTTCTGCAATTTGGGCCCTGCAGGGATGGAAGCTCTCAGCCCGTAAAGAATCTGCCTGCAAGGCAGGAGACCGGGGTTTGATCCCTGGGTAGGGAAGATTTCCCCCAGAGAAGGGAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCAGGAATTTGCAAAGTGTTGGACATGACTGATGCAACTAACTCTTAACTAGGGATAGGATGATGAGAGAAGCTCAAGGCTGTTTAGGCCAAGTCTCTAGAATTGTGAACCATGATTTATTTTCCCAAAGCTCTTCTTTTTCTGGGTTGAGAAGGGATTGGGTAGGAATGAGGGGTGGGAAGACCAAGAAGAGGATGCTCT EMBV3_09718 AGAATTCCCTGGGCTTCCGGCTCCTGGACAGCATATCACAGAGGTGCTCTTATGTCAGCT Gene BVT0102_207973 + 1 EMBV3_18467 GK000020.2:55751132-55752613 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117770 1 XLOC_071936 NonCoding TCONS_00117770 XLOC_071936 NonCoding NonCoding - 20:55746438-55753795 - TSS88238 7357 3 TCONS_00117770_4 171 0.147886366725567 1 0 0.000340280620870185 4.09750885647253e-06 0.000132074140422062 9.93292553596123e-05 0.000426138914981717 0.000229005536656263 4.37292540772603e-05 0.00047192328268325 0.000138026464097892 0.000992209715671831 0.000772229683088993 0.000679770705344596 0.000202413641536104 0.00131138634636866 0.000609953738434724 0.00022916146056067 6.31867407992895e-05 4.43362645860426e-05 0 9.7749529701495e-07 0 0.000322770088709572 0.000108487438157681 0.00049790382481634 0 1.43648313265202e-05 0 0.000291145378446999 0.000110857031972931 0.00017202353659316 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 0.0 1130 91.76 0.107108875900503 NM_005643.3 TAF11 Homo sapiens TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa (TAF11), transcript variant 1, mRNA. 1e-67 264 72.84 0.0622536359929319 0 noncoding 0 0 0 0 -0.00523189079457831 0.981079852636622 0.00747779100428825 0.873132789615132 GGACACATAGGGAGGAAAAAATTTATTTGGTGAGAAGACCAGGAATTGAGCTTCGGACACATGGATATTGAGGTACCTTTTTGACAAGCAGACGTGATTATTAGATAAGAGTTTTTGATGTGCTAGTCTAGATCACAGAGAAGAAATCAAATCAGGTTAAGACATCCTGGCTTGTTAGCCAGTTAATATCCAAGCTGGACCTCACCCATCTCCCACTAGAGCCTACATGATCTCAAGCTATGTCATGAGTTCTCTTGACCCTTTTATTTTCTTCCTAGGTGATTTCGCCCCTTCTCCTGGATTTAAAATTTTATCTTTATAAACATAATCCTAAATTTCATACTTAAACTTGATTTCTCCTCTGGGCACCAGAATCTGAAGAGAGTAATACTAATAGAATTCTGAAATACACTGAGGAGACTAAAAACATTCTAGGAACTTGATTGGGAATTTTAAGTCAACGAGGAAAGCAAAAACCAAGATAACAAAAATAATGATAGATTATGTGCATTATAAATCATTTATATACTTCTAAGTTGTGACAAATATCATGCAAAAAAAATTAAAATAAGGATAACAAGTGGAAGCCCACAGTTTTTAAGTAGGTCAGAGGTGTAAGGAAGGTCTTTCTGAATTGAACTTAATCTGGGAAATGAGAGGAAGCAGATTTCCAAGCATGATTATGTGTGGACAAAGGCAAGAAAGAAGAGTCAGGTGAAATAAACTTTTCAGACAGAAATGCAGCATATATGAATGCTTCAAAGTGAGAAGACTCCTGAGACTGAAAAAATGCCTGCATTTGAGGGAACTGTAGCAGATGACAGAGGTTGGAGAGGTTGTTAAGGCTGAAATAACGAGGTTCATCCAAGCTCATCACCTCTTGTTGTTGTTCAATTGCCCGGTCATGTTTCTTTGCAACCCCATGGACTGCAGCACACCAGGCCCTCCTGTCCCTCACCATCTCCTGAAGCTTTCCCAAGTTAATGTCCATTGCATCAGTGATGCCATCCAGTCTTCTCATCCTCTGATGCCCTCTTCTCCTTCTGCCTTCAATCTTTCCTAGCATCAGGGTCTTTTCCAATGAGTGGATTGTTTCCATCAGGTGATGAAAATACTGGAGCTTCAGCAGCAGTTCCTCCAATGAGTATTCAGGGTTGGTTTCCCTTAAAATTGACTGGTTTGACCACTCCCACACACTATGCTATGACTATATATGCTCTCTTTCTCTTTACTGGAACATTCTTTTGTATTATCTCCCCTTTCTCTACCTTTCAGTCTTTGACTCTTCTGACTTCACCCACAAAATCAAATATGCAATTTATCTTTTACATGCTACTTGAATATAGTAAATCATTATTTAACCATATTTTATTTATATTGTATTCTCAGTGCTTCAGTTCAGTTCAGTTCAGTTGCTCAGTCATGTCCGACTCTTTGCCACCCCATGAATCACAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCACATCCATCAAGTCAGTGATGCCATCCAGTCATCTCATCCTCTGTTGTCCACTTCTCCTCCTGCCCCCAATGCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCACATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGATTGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCCCCAACACCACAATTCAAAAGCATCAATTCTTCAGCGCCCAGCTTTCCTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGACAGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTCAATATGCCATCTAGGTTGGTCATAACCTTTCTTGCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGTCCCAAAAAATAAAGTCTGACACTGTTTCCACTGTTTTTCTATTTCCCATGAAGTGATGGGATCAGATGCCATGATCTTCCTCTTCTGAATGTTGAGCTTTAAGCCAACGTTTTCATTCTCCACTTTCACTTTCATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAAGTTATTAGTCTTGGCAAATAATCAACAGATGTTTATTCAAATAAGGACAGATTTGTAGGCAAGAGATAAATATTAATGGTCTAAAACATTTGTTTGAGTAGATGCAAGCTGTATGGATTACATCAGAAAATAATAATAATAATCAACTTCATGTTTTAAAATCTGCACAAAAGGAATTTGGTAATTTGCACTTCCAGAGCTAAAAGAAATATGTACTTTTTCTTGGCCACTATATTAAGGAAGATAGTGACTCTTCATGCCAGTCTCAGTCTTTGAAACACCAGTATAAAGGTCTTTCCTTGCTCCCATTGAGTCTGCTTTCTATTCCCTATATCATATACTCATTCATATCTCTTTATTATTTGGATTATATTCAGCAAATAGGTAGAACTAATGTGGTAGCACAAATGTTGCAGAGAAAAAAAGCAAAGCCCAGTTCAGTTCAACTGCCTCCTCCATCCAAGGCAAACTATGTGAAAAGCCATGGTTCTGAGCACCATTCAGTTCCAACTAAGCACTAACGTTAGAGGACTTTCTACTGTTCTATATTATATTGTACTTCCATGAGGAAAAATAGAGCTACAAAGTGTCTTCACCATCTAAAACAAGACTCTCTACATAGGTCATTTTCCATGCAACTCAGAAAAAGATGAGAGCACAATAATTCTGATGAAATGGTCATGCAGGCAACCATGAAAAAGGATTGTTCAGGCTGTGAACATGACTAACATGCAAGTTTGCCAGGGACAGCAATGGGGTGTCTGCAACCACAGACTGGTTTAGTTACCTTTGAACGTTTGCCTTTGGAGCTTAACAAGCAGATCTCACCTTGACCAGACGACTCATTTCCTCCGAGGGCCCACACTACTTGTCTCCTAAAACCCGGTCAGGACATACCACTCCCTGGTTTAATGATCTTTCTTCCTGATGCCCCAGGATGCATCAGGTAACAAATGATTCCAAAATTTGGAACATTCTAGCACCGAACCTAGGTGTGCTCATAGTTTCTCCTGTGAGCACACACACTGTTTCATTCTTTGGGCAAACTAAAGGTTACTGGGTATGGAAATTGCCTCAGGGATGGATGAGAAGTGGGAGACATGGGTGGAATGAAAGCCTGAGGGTTAAGAGGCTGGTGAGCCAGGGGCCTGGTTCCTCGGAAATAGGCCCTTCCGGACTCAGGCCTAGAAGAAGAGGACCTTCTTGTGCTTGGTGCTGGGCATCTGCATCTTTTCGCCGAGCCTGCGGCTCCCTCAGATGCTTGGGTTGGAGTGGGGGCGTCTTGCTTCACTTCTCAAACAGGAACAGGGCCTCTTCCACCACCTCCCTGATGAAGACCTTGGCCATTCCGGACATGGCTATGATTAAAATCGGGACACCGGCGTGCCAGCCACTGCCTGGTTCAGATGTTGGATAGTGGCCTTGGGGAAGCCTGAGCGGCAACACACTTCGTAACAGTTCAGCTGCTCCCTCATAACAAACACGACAGTTCTCATCTTCTGGGCCTCCTCTTCGTCCACTTCCCATTGCCTGGCTTTCTTGCCCTCAGTGTCCACTTTTTGTCTCTTGGCCGCAGAGGACATGAGGAGGAGTCCGCCTTTTCACCTGCTCTTGGCTGCGGGTAGTCCTGACGCCTGAGCTCCCCACCTTCTTCGTCAGAAGACTCCCTGGCTTCCTGGGTTGAGTCCTGCAGCAGGATACGGTCTGGGTAGCTGGGGTCCGAGCCTGGGGGTACGCCTGGTTCTTCCCAGACACACTGGCCTTCTCCATCCCAGCGCTGGTACCAAGTCCCCTAGCTCAGAAAGCTCTGGCTCTGGGTCCTCCCTGAGGCAAAATCAGTGGGAAAGAAACACCCTCAGCCTCAGCATCCGCAAAAGAAGGATCCGCCTAAGACATGCCTGGGCCCAGCCCCTGTATATGAGGGTCTGGGGCCCTGAAGCCACGCCTGCCTGAAAGTCGGCTAAACTCCTCAGCCAACCCTGCACAGTGGGGGAATAGGCCCCTCCCACTGCCCCAGGCAAGGGGCGGAGCCGGGGTGTACCGCCCTGGGCGGCAGGGGGCCAGCCCCAGCAGTCTGCCAAGTTTCTGAACCCTTCAACTTAGGCCACGATGGAAATCTAGACGTGTCCTCAGAAGACCTGTCTCTCAAAGCTGCCTTTTGAAAGCTTTCCAGCAGGCAGCCCAAAAGCCCAAATCCTCTCTCCGCTGCTCCTCAGAACAGGCTGGCTGTCTTGTGGGGTGATGGCTAATCCAGAAAGCCCAGAGAGTTCACTACTCTGGGAGACTTTCTTGCCACTTCAGGGTGGCCCCAGACCATCCTCTCCCGCAAGGCACAGGCATGAAAATAGGTCGGCGGGCCTACTCTCCTCCTGCCTCTCCACCTGCTCTCTGCTCTGCGTGGTCCACCCTTCCTCCGTCTGAATCCCTGGCCTCGGTAGAGGTTTTCAGGGTCACCAGGGCTTAAGTCTCTCCCCAGTGTCCCTATCCTGCGACGGCTGAGATCTGTGGCCATTTCCCCGTTGGTTCTTTTCCCGTGGTAAGTATGCCTTTGGAGTTCAACCCGCCCTTCCGGACTTGGCCTGATTACTCACTTCCTTTGAGGGCGGACGGTACTAGTCCTGCTTAAGCAGTTGCCACACATGATCCATTCACCTTTCATCCCCATCCCTTGGAGGGGCGTTTGGTTGCTGCTGACTTCCAGCACTTTGGAAAGCAGATTCGAGGTAGGAGTCCTGTATGCACAGCATGCCCTGTGGGCCCACACCCCATTTGAGAGAAACTCAGGGTAGAAGGGTCCCCATGGGAATGAAGAGGCCAGGGGAATGAAGGTCCATGGGGCCCTGACTTTCTGATCAGCCATCCCCCAAAGACAGGAGGCTTTCTTCCAGATCTGAACTCCTGGACTCCGTCTCTTGACTTGAAATGACCTGGGGCATGAGGTAGGCCCTCCGGCCCAATGGAGCAACCGCGTGTGGACAGGACAGAGGCTTGCCTCTTCCTGGATCTACCTGGGAGCGCTTCACTGCTTCCTCACCTTTCTGGTACAAGGCTCTTAGCTCTGGTTCTTTGCAAGAGGGTCCTGATCCAGTCGCCTGGCCCCACCTGCCCAAATGTGATCAGGAGTTGGTGAGTGGGTGACTTGGTCAAAGGCTGGGATCTCACCCCGACCCTCACTCCCACCTTCACCCCACCCATGGAAGGATTCTGTGAGGTTTCCTTCCGGGACCGCGGATGGCTCGGGGATCCCATCCCCTGGCCTTTGAAGGCCGAGCCAGCCCCAGGCGCCTGGGAAACAACCCATTACTTCCAGAGGCCTAGGCTTCGTCTTGCCCACGGCCAGACGTGGTTGGCTGAAAGGCACTGAAGCGCACTGGCGTCTCTCCGCGTGAGAGATCGTCGTCTGGTGTCCTCCGGGAAGGCCTTGCCTCTGCCGAGGAACACCAAGGCTTCACTCCCGTAGTGACTTTGAAAGAATTCCCTGGGCTTCCGGCTCCTGGACAGCATATCACAGAGGTGCTCTTATGTCAGCTGGATGGCTTTGCTAGAATTCCCTAAGTGAATCCACCAGAGCCTGGTGTTCCCGATCAGGCGTGGTTACAGTGTATGGATTCAGCTTCTCCGGTAGACAGGCAGGCGCCATTTCAGGGGTCTGTTCTCACAGGTGAGTTCTGGCAGGTCGTGTCTCTCAAAGAATTAGACTCTGGGTCTCGGGTCTCTCCCCAATATGCCTCCGGGTGAGAGATGTTTCTGCGTGTTACTGGTCTTTTCAAAGGAATAGCTCAAGTTGTGCTGGATGTCTTCTCTCCCCTTTGAGGCAGTTGATCCATCCTGGTTATGTCCCATCCTGGTGGCAATGTCCACGGGATGCAGGAGCTGCCTCGGAGATGGGGCAGGGGTGCCGTATGGGGAACACAGTGAAATAAAGCCTGAGGGTTAAGAGGCTGGTCAGCCGGAGGGCCAGGTTGCTCAGGAACAGGCCCTTCCGGGCTCAGGTCTAGAAGAAGAGGATCTTGTGCTTAGTGCTGGGCATCTGCCCCTTTTCGCGTAGCCTGCGAACAGCCTCCCTCAGATGCTTGGGTTGGAGTGGGGGCTTCTCGCCCCACTTCTCACACACGTCTAAGGCCTCTTCCACCACCTCCCCGACGAAGACCTTGGCCATTCCAGACATGGCAATGACCACGTTCTGGGATACCGGCGTGCCGGCCACGGCCTGGATCAGATGTTTGATGGTGGATTTGGGGAAGGCTGAGCGGCGAAACACTTCGTAACGGTTCAGCTGCTCCTTGCTCATAGCAGCCACGAGGGTTCTCATCTTCTGGGCCTCCTCTTCACCCACTTCCCGTTGCCTGCCTCTCTTGCCCTCGGTGTCCACTTTCCGTCTCTTGGCCACAGGGGAACGTGAGGAAGAGTCCGCCTCTTCACCTGCCCTTGGCTGTGGGCAGTCCTGATGCACCAGCTCACCGCCTTCCTCGTCAGAGGCTTTCCTGGCGTTCTGGGCTGGGTCCCGCGGCAAGATTCGGCCTGGGTTGCTGGGTTCCGGTCCCAGTGGCACGCCTGGTGCCTCCCGCGACACATCCAAGTTCGGACCTTGGTCCGGGAGCCACGCCCTGGCCTTGTCCATCCCGGCGCTGGGTCAAAGACCTTAGCTCAGAAAGCTAGAGCCCTGTGCCCTTCCTGATGCAGAGTCCGAGGCAGAGAAACACACTCAGCAGCAATCCCCTCAGAGGCAGGATCCGCCTGAAAGGGGCCTGGGACCAGCCCCTTTATATAAGGCTAGGCCTGAAGCCACGCCCACCCGGAAGTCAGATGAAGGCTCAGTATCCCCCGCGCAGCGGAGGGGGGGGGGGGGAGGCTCCTCCTACTGCCCCAGGCAAGGGGCGGGGCCAAGGTCTACCTCCCAGGGCCGCATGCTGGGGCAGACTGCTGGCAGTCTCGCAGGATTCTTCCTGCCTCAGTTTCTGAACCGTTCATCTTGAGCCACAATGGAAATGTAGACATGTCCTCAGAAGACCTGTTCTCTCAAAGCTGCCTTTTGAAAGCCTTCCAGGAGCCAGCCCAAGAGCCCAAGTCCTCTCTCCGCTGCTCCTCAGAACAGGCTGGCTGTCTTGTGGGGTGATGGCTAATCCAGAAAGCCCAGAGAGTTCACTACTCTGGGAGACTTTCTTGCCATTTCAGG TCONS_00114046 . 3' 134230 TCONS_00114046 . 3' 141586 EMBV3_21902 TTTCGAGACTGGGTTCCAAAGGAGCTTCAGAGAGTGGGCTGCGTGGAGCTTTTAAACACA Gene GeneID:540914|MPPED2:NM_001076929:47_cdna Constitutive 0 NULL GeneID:540914 15 GENE MPPED2 MGC143166 metallophosphoesterase domain containing 2 EMBV3_12979 GCTGTCACCGGCAGACTGTCATCTAAGGAGCTTCAGGAGCAAGCTGACAAAGAAATGTAC Gene GeneID:539643|VCPIP1:XM_002692680:58_cdna UTR3_Alt 2 NULL GeneID:539643 14 GENE VCPIP1 NULL valosin containing protein (p97)/p47 complex interacting protein 1 EMBV3_17504 GGGAATGATGCTAGCTGCCGCCACCTCAAAAACATGTGCCACGAGTATAGCATATCCACA Gene GeneID:510392|SLC25A36:XM_002685042:112_cdna Constitutive 0 NULL GeneID:510392 1 GENE SLC25A36 NULL solute carrier family 25, member 36 EMBV3_21130 AGAATGGGCCTGTCTCGCCATCTTATGACCAAGGCCACAAATCCTGCTGTGCAGACTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21333 ACTTCGTTCACCTGACCAAGGTTTCCGAGCAGCCGCTGAAGGCAGAGTTCTCAGGTACTT Gene BVV0102_288484 + 0 NULL GK000010.2:15019252-15025857 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016116 TCONS_00016113 TCONS_00016115 TCONS_00016114 TCONS_00016112 1 XLOC_008633 Coding TCONS_00016116 XLOC_008633 Coding Coding CLN6 10:15025095-15041940 = TSS11229 2424 2 TCONS_00016116_1 311 7 0.856506767988601 0.00059031928320658 2.49108881857032e-05 0.000183381393922736 0.00168689362973184 2.43310992408257e-05 0.000106164258380147 0.000103043180916721 0.000282900434491638 0.000651551793282733 3.1712904454854e-11 0.000107621119150928 9.20094096142306e-05 2.37280701330265e-10 0.000741271941912843 4.53067245566408e-11 0.00530519896098808 0.000552457078491046 0.00522677923488782 0.000207467611808334 0.000149695668419201 1.37273586929719e-17 0.00139438847882393 0.000871720959356866 0.000257369678438074 0.00118005315431064 7.13422848978949e-05 0.000445311202803813 7.21356938632684e-05 0.00012098341622703 0.00088572942169706 NM_001109984.1 CLN6 Bos taurus ceroid-lipofuscinosis, neuronal 6, late infantile, variant (CLN6), mRNA. 0.0 2966 100.00 0.677805280528053 NM_017882.2 CLN6 Homo sapiens ceroid-lipofuscinosis, neuronal 6, late infantile, variant (CLN6), mRNA. 0.0 1344 90.53 0.403052805280528 TCONS_00016116_1 sp|Q9NWW5|CLN6_HUMAN CLN6_HUMAN Ceroid-lipofuscinosis neuronal protein 6; 0.0 558 91.00 0.996784565916399 1 coding 0 0 0 0 -0.0695621494115274 0.666917850724135 -0.0161013722810831 0.727280049198289 CTGGCCGGAAGGTTAGCCATGGAGGCGGCGGCACGGAGGCGGCACCCGGGAGCGGCGGGCGGCCCCGGCGCGCAGCCGGGCGCCTCCTTCCTGCAGGCCAGGCACAGCTCCGTCAAGGCTGACGAGGCTGCTGGCACGGCCCCCTTCCACCTTGACCTCTGGTTCTACTTCACGCTGCAGAACTGGGTTCTGGACTTTGGCCGCCCCATAGCCATGCTGGTGTTCCCTCTCGAGTGGTTTCCGCTCAACAAGCCCAGCGTGGGGGACTACTTCCACATGGCCTACAACATCATCACGCCCTTCCTCCTGCTCCAGCTCATCGAGCGGTGCCCCCGCACCTTGCCACGCTCCCTGATCTACGTTAGCATCATCACCTTCATCATGGGGGCCAGCATCCACCTGGTGGGTGACTCAGTGAACCACCGCCTGATCTTCAGTGGCTACCAGAACCATCTGTCGGTCCGTGAGAACCCCATCATCAAGAATCTCAAACCAGAGACGCTGATCGACTCCTTTGAGCTGCTCTACTACTACGATGAGTACCTGGGCCACTCCATGTGGTACATCCCCTTCTTCCTCATCCTCTTCATGTACTTCAGCAGCTGCTTTACTCCCACCAAAGCTGAGAGCTCAATGCCAGGGGCAGCCCTGCTCCTGGTGGTGCCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTCACCTCCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGGAAGCGCCTCTTCCTCGACAGCAACGGCCTCTTCCTCTTCTACTCCTTCGCCCTCACCCTCCTGCTCGTGGCGCTCTGGGTCGCCTGGCTGTGGAATGACCCCGTCCTCAGGAAGAAGTACCCGGGCGTCATCTATGTCCCCGAGCCCTGGGCCTTCTACACCCTCCACGTCAGCAGCCAACACTGAGTCTTGGGCACAGGCCCCTGGTGCTCTGTGGGTGGGAGATGGATGGTTGAGAGTGAGTGTTGGGAGTGTGTGCGTGTGTGCACCCACAGGAGATGGATGGCTGAAGGTGAGTGTGTGGAGCGTGTGCGTGTGCGTGCACCCACTGGAGATGGACGGCCGAAGGTGTCTGAGTGTGCGGAGCGTGTGCGTGTGTGCACCCACTGGGGATGGTCGGCCAAAGGTGAGTGTGCGGAGCGTGTGCGTGCGTGCACCCACTGGGGATGGACGGCCGAAGGTGTCTGAGTGTGCGGAGTGTGTGTGTGTGCACCCACGTGTGTAGCCCACAGCTAAGAGCGTGGGTGAGAGTATGCCTGGTGCCTGTGGATAGGGGTGTGTGGGGGTGTGTGTGTGTGTGTGTGTGTGCACGTGCGCACGCCCGGAGAGCATCACTGTGAGACTGAATTGTTTTGGTTAAGTTTCCATTCAGTTTAGCTCTTTTTCATGATGGGATATAGTCTGAGGCAGTGTGTCCGGACCAGGAGCTGGGCCCGGCCTCCCATGCACGCTGGAGTCGGGCCTTCTCACTCACTGCTCAGGGCTGTCTCTTCCTCCTGGGTGTCTCCTGGTAGTCGTAGGGGAGAGGCCTGGGTGGGGCAGAGGTCAGGAGGGAGCTTAGCCTGTCACCTACCACCTGGCTCACTCCTCAGACCACCTGACCCTGAGGCCAGGTCGCAGGGGTTCCGTGAACTTGTGTGTGCTCATTTGCAGTGCACCCCCTTCCCTGGGCCACGTTTGCAGCAGACGGGCTGACGGGTCCCAAGTTGGCTGAGGGCTGGTTGCCGTCTCCTCTCGGGCAGCCTTGGGAGGGGTGAATGGTTCCTCCTTTCCCTGCCTTCTTCAACCCTGGGAGGGGTACGTGCACCCCAGATCCTCACCCCACCGCAGGCTGCTGGGGTGGGAGCCAGAGCCGGCCCTCCCCCAACTGCCGGCCTGATCTTAGGGTCTGGCAGTGGTCCTTCCCAGCCACCTTCTCTCCCGGGAGCTCGGTCTCTGTCCCGCCTTCGGGATCGTGGCACCCACTTCGTTCACCTGACCAAGGTTTCCGAGCAGCCGCTGAAGGCAGAGTTCTCAGGTACTTGCACTCACTAGAGGCAGACATCGTGGGGCTGTCAGCGTGTCTCAGCCTGAATCCACGCCTGCCACGAGTGGCCCTGCTCCCAGGAAAGGGGCCCTTATTCTGGCAAGATGCCCCCCACCCCAGCACCGGGGCCAGGCACGCAGCCTCGCTTCCCAGCATTGCTGGCCTGCACTCGTGCGAGGGGCTCAGGGGGGCCTGCCTTGCCTTCCCTGCCCTCCCCTCCTCTCCTGTGCTCTCAGGGACTCTGCCTCAAATCCTCCTTTCATGTAGGGGTCCCCCCAGCCCCGGTGAGTCCCTGTCTGCTGGCAGCATCAGGGGTGAGCAGTATGAATAAAGGCAGTGTGGAGCCAAGC EMBV3_34503 CTTGTGTTTCCTCTCTCAGCCACTGTCCTTTCCTATGCCTTCATTGTCTCTGCCATCCTG Gene GeneID:516636|LOC516636:XM_002693165:107_cdna Constitutive 0 NULL GeneID:516636 15 GENE LOC516636 NULL similar to olfactory receptor Olr223 EMBV3_18725 CTGAAGTGTGTCTTCCACTAGTCCTTTCAGTGAGGGTATGTGACTCGTAAACTGTTTCAG Gene BVT0102_082070 - 1 EMBV3_03724 GK000020.2:13006846-13391724 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00116014 1 XLOC_070183 NonCoding TCONS_00116014 XLOC_070183 NonCoding NonCoding - 20:13133742-13135194 - TSS86482 1452 3 TCONS_00116014_3 60 0.898071625344353 1 0 0.000391471342780771 0.000264579591208389 0.000277237496418216 0.000399385045756191 0.00021002292128413 4.10042140599062e-05 8.03265219822687e-06 8.5950724858749e-05 0.00026717025929104 0 7.88288377723632e-07 0 0 4.62809153572449e-07 0 0 0 0 0.00028561975779137 0.000653765623658134 6.29540231002747e-05 0 0 0 0.000355012881957253 0.000398370331566484 0.000323625416339986 0 0 0 XM_005194808.1 LOC101905230 PREDICTED: Bos taurus uncharacterized LOC101905230 (LOC101905230), 8e-137 491 95.77 0.210743801652893 0 noncoding 0 0 0 0 -0.641142780198701 0.010893194083218 0.0471910947921008 0.339945895467611 AGGCTTCATGCGCCATAGAATTCCTTTTACAACTAACCTACTTTGAAGTTGTAATGCAAAAGCAGTCATAGACAAATATGTAAACAAATGGGCATGGCTGTGTTCCAATAAAATTGTATAAAAGCAAGCAATGGCAAGATTTTTGCCCCAGGTCATAGTTTACTGACCTTTGGCCAGAGATAAGAGATAAAAGTCAATATTTGATAAAAGAGTAGAGAATTTTCTTGAATTTTTAAATGCTTGACCTTTAGGATGAGGATGCATACAATGTCCAAAGTGATATAAATAAAAGTAAAGCACACTGAGTCACACAGTAATGAAGCTCCTGAATACAAGGATCAAGAGGAAAATTTTATCCACAGCCAGAAAAAATGCAGAGTATCTATAAAGGACCAGCTGATAGCACATTTCTCATCAAGAAATAAAATCCAAAACAAAAGGATCAAATCTTCACAGAATTGGGGAAAATAGTAGTCAATCTATAATTAGATACCATGAAAAACTATCATTAAAGAATGAGGGCAAAATAAAGACACTTTGAAACAAATTCTGAAACAGTTTACGAGTCACATACCCTCACTGAAAGGACTAGTGGAAGACACACTTCAGAAAGAAGGAAATTGAGTCCAGAAGGAAGGAATTGAGCCCCATGCTGAGAAGAGACTCATTTTCTGTGTGTAATTTAAACATGCTTTAATGATAATAAGTGATGTCTAAGATCTTAAAAATAAGACAGAACCACAATACTAGGCAACAATAATTTAGATTTTAAGTCAAGTCGTGCAAGTTAAGGGAAGAAACCAAAAAAAGAAAAAAAATGGAATGCTTAACTTCCAAAATCAATAAAAGAATTAAAAGTTAATTTTAAAAAAGATTAAATCCAATAGGAGTTGGAAAAGGAAAAGAAAGATTCATGGGAAAACAAAATAATAGGCAGAAATCAATTCAGATACACAAGAAACTGCATCAAGTGGGTTTAAAAGACAGAAGTTCTCAGGTTTTTTTTTTTAAATATAACAACAAAATCAAATCAGGAATAAGAGTCACACCTAGAACTTAACACAAAAGGTTTAAAAGATGGAAATAATAGATTAAGGAAATGCTAATAAAATAGATCTGTGACAATACTATTTTCAGACAAACTTTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCACAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCCGTTGTCCCCTTCTCCTCCTGCCCCCAATCCTTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTTTTCCCATGAGGTGGCCAAAGTACCGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTG TCONS_00114562 . 5' 126888 TCONS_00114562 . 5' 126888 EMBV3_01034 CATTCGCAGGTGGAGTCTCAACCACTGGACCACCAGGGAAACCCCTTTCATTCCGTATAA Gene BVT0102_074958 + 0 NULL GK000014.2:8985786-9109761 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16213 AACAGTGATGACAGCAACCTCTACCTAACAGCCAGCAAGAAGAAGCCCACGTGTTGCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35226 AAGAGAAAGAAAAAGATGATGATGATGAAGGTAGGATTATCGATTGTGCTTTTACTGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26841 GTGAGCACCAACAACTTGGGTGTTTCTGTTACCATCCTGTGGACCCGTTTCACTCATCAG Gene BVT0102_312095 + 0 NULL GK000027.2:6459870-6537152 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156855 1 XLOC_095315 NonCoding TCONS_00156855 XLOC_095315 NonCoding NonCoding - 27:5915869-5916197 - TSS117180 328 2 TCONS_00156855_2 45 0.533536585365854 1 0 0 0 0 2.53175267695562e-05 0 0 0 0 2.40552773636649e-05 0 0 0 0.000101328853947135 3.16308948886959e-05 2.99158649628834e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005201000.1 LOC101907227 PREDICTED: Bos taurus putative protein FAM90A12P-like (LOC101907227), transcript variant X1, mRNA. 7e-92 340 100.00 0.570121951219512 0 noncoding 0 0 0 0 -0.185178961393131 0.136285686658711 0.00349222200381988 0.945205329411968 GTGGCAAAGGGATGGCTGACGAGTGAAACGGGTCCACAGGATGGTAACAGAAACACCCAAGTTGTTGGTGCTCACCAATTGTATGATCTACTGGAATTGAAATATATTTTTTGTACACATAACGTTTAATCTAACAAATTCACTGAATTAGTTCAGTTCAGTCGCTCGTTGGTGTGCGACTCTTTGCGACCCCATGAATCACAGCACCAGGCCAGGCCTCCATGTCCATCACCAACTCTCTGAGTTCACACAGGCTCATGTGCCTCGAGTCCGGATTGCCATCCAGCCATCTCATCCTCTGTCATCCCCTTCTCCTCCTGCCCCCAAT TCONS_00155846 . 5' 9506 TCONS_00155846 . 5' 9506 EMBV3_13193 ATAAAAAGTGAAAGTAAGCCATGCACATGAGTCCTGGTGAGTACAGAGTGACCCTTGCCC Gene GeneID:782502|LOC782502:XR_084633:67_cdna Constitutive 0 NULL GeneID:782502 20 PSEUDO LOC782502 NULL similar to Uncharacterized protein KIAA0947 EMBV3_21875 AAAAGAGAGAGCTAGGCTCCCGTACCAGTCTACAGAAGCCCATTTTGCTTCAATGCTCCC Gene BVV0102_132350 + 1 EMBV3_33272 GK000023.2:39240844-39312099 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07050 AAAAACTGCCTACGATAATACCACCCTGTCTCCCAGCTTTTGCCTTGAAAATCAAATGCA Gene BVV0102_319162 + 0 NULL GK000009.2:14332154-14644491 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35958 GGAGTGGATTGGCTCCCTGGTGAAACAGCACAAAGAGACCCTGAAAACAAAGATTCACTG Gene GeneID:281824|HSD3B1:NM_174343:8_cdna Constitutive 0 NULL GeneID:281824 3 GENE HSD3B1 HSD3B hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 EMBV3_27409 TGCTGTCCTACCAGAGCTCCGTGGTGTCAGATGGGGAGACCTGGCACGTCATGAGTATCT Gene GeneID:505103|PHGDH:NM_001035017:20_cdna Constitutive 0 NULL GeneID:505103 3 GENE PHGDH MGC128463 phosphoglycerate dehydrogenase EMBV3_17353 AGACACAGCCGAGGACAAACAGGAGACAGGAGTTCCCGAGATTGTTCTGCACACTCATTT Gene BVV0101_060335 + 0 NULL GK000018.2:11077311-11115709 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085414 TCONS_00085417 TCONS_00085415 TCONS_00085416 TCONS_00085418 1 XLOC_051866 Coding TCONS_00085418 XLOC_051866 Coding Coding ZDHHC7 18:11114744-11121015 = TSS63798 2595 1 TCONS_00085418_2 308 6 0.587081339712919 0.00460396838345698 0.00284242259619872 0.00364267642379166 0.00142023548579942 0.00160334848365519 0.000791226023818346 0.00152141108247941 0.00112499727094485 0.00117621401442282 0.00135575878353148 0.00032017342113022 2.97268337689399e-09 0.00014816281627444 0.000348040391892125 0.000335491830038842 0.0160088453484034 0.0055724090891878 0.00991704551545337 0.00232405940211924 0.0063466782788828 0.00158013913592279 0.00531205746055226 0.00443683399611557 0.00618884405606165 0.00391159515115061 0.00221110231008603 0.00253357623784552 0.00226143478861965 0.000716736885944859 0.0032455929397485 XM_869233.5 ZDHHC7 PREDICTED: Bos taurus zinc finger, DHHC-type containing 7 (ZDHHC7), 0.0 4681 100.00 0.999614643545279 NM_017740.2 ZDHHC7 Homo sapiens zinc finger, DHHC-type containing 7 (ZDHHC7), 0.0 1110 84.30 0.389980732177264 TCONS_00085418_2 sp|Q9NXF8|ZDHC7_HUMAN ZDHC7_HUMAN Palmitoyltransferase ZDHHC7; 0.0 603 93.83 0.996753246753247 1 coding 1 0 0 0 -1.24840733267752 0.114090449697234 -0.0243282569001399 0.671260082766862 ATGCCATCCTCAGGACACCGGCTGCGGGACGTCGAACACCACCCTCTGCTGACCGAGAATGACAGCTACGACTCCGCGGCCTCCTCTCCCGCCGAGGCCGACGCGGCCGACAGAGTGTGGTTCATCCGCGACGGCTGTGGCATGATCTGCGCCGTGCTGACCTGGCTACTGGTTGTGTACGCAGACTTCGTGGTCACGTTCGTCATGCTGCTGCCCTCCAAGGACTTCTGGTACTCCGTGGTCAACGGGGTGGTCTTCAACTGCCTGGCGGTGCTCGCCCTGTCGTCTCACCTGCGGACCATGCTCACCGACCCCGGGGCGGTACCCAAAGGAAACGCTACTAAAGAGTACATGGAGAGCCTGCAGCTGAAGCCCGGAGAGGTGATCTACAAGTGCCCCAAGTGCTGCTGCATCAAGCCTGAGCGCGCCCACCACTGCAGCATTTGCAAAAGATGTATTCGGAAAATGGACCATCACTGCCCGTGGGTGAACAACTGTGTCGGAGAAAAGAATCAGAGATTTTTTGTGCTCTTCACTATGTACATCGCTCTGGCATCCGTGCACGCGCTGGTCCTCTGCGGGCTGCAGTTCATCGCCTGCGTCCGAGGACAGTGGACAGAGTGCAGTGACTTCTCCCCTCCCGTCACTGTCATCCTGCTAATCTTCCTGTGCCTTGAGGGTCTGCTGTTTTTCACTTTCACCGCGGTGATGTTCGGCACCCAGATCCACTCCATATGCAATGACGAGACGGAGATCGAGAGGCTGAAGAGCGAGAAGCCAACGTGGGAGCGGCGGCTGCGGTGGGAAGGGATGAAGTCCGTCTTCGGAGGCCCCCCCTCGCTGCTCTGGATGAACCCCTTCGTCGGCTTCCGGTTCAGGCGACTGCAGACAAGACCCAGGAAAGGGGCCCCAGAGTTCTCAGTGTGAGGCCCTCTCGTCACTCCAAAACTTGTCCACGGACTTAATTTATCTGGGGTTGGAAAGGGTATCAACAGCTCCCCTGTGACCCCAAGGGCGAGTGGCCCAGCGGCCTGCAGCGAGCGGGGCTTCACACGTTCACAGTCACAGACGGCAGGTTCCCCACGAGTGACGTCACTGTCCAGTAATGGAGGGATGTGGCCGCATGGAGAAGCCAGATGTTCCCTCCCTGCAGTCAGGAGTCTGTCAGCACGCTCAGCATTTTCTAGGAAGCTGTGTGGGCCGTCACATGGGTTGTTGGAATCCTACGTGCTGAGCTGCTTGCCTCAGTCATGAAGAAAAGCCAGTCCAGTGGACAGAACGCCACGGTCGGTGGCCCTGGGACTCTTCAGGCCCCCTCGGTCCAGGAGGGGTCTGGACGCAGGAGCCCGTGGGGGCTACGGAGCAGCAGGGCCGTACGCTCACTCCTGGCCTGGGGCCGGTGGGCCCTAACCCCATGAGCAAGTCCTCGCGTGTCAGTGTGTGTGCGTGCACGTGTGTTTTAAAGTGGGCCGTGTTGTTCAGGCGACGTATCATGGGGGTGTGCTGCAAACAAGCTATTTTTTAGAAACCAATGTTTCAGGGAAGAGGGGCGAGCTGTGCGGGGTCCCCTCCCGTGGGGTTTACATGAATGTATTGCATACTGGAGAGTATCAAGATCCAAAGAACAGTCATTCCTGTGTGGTCCTCTGTTGCCCTCCTTCCTGTTTTCAGTTTATTTTAACAATCTGGAGTGTGTTGACAGGGCTTTGGAACCGCACTGTGTGGTTCCAGCTGGATCAGCGGCGCGTCCCGGCCCCTCTGTGGCCCCAGGCTTGCGCAGCTGACCCTGCGGGAGGTGGGTGAGGCCCTGAAAAGGGGAGGGGACCTGGAGGCAGGAGCCCTGTGGACCTGGCCTGCAGACAGTATTCAGGATGGCAACAACTGGTTTGATTTTTTAAATTTGTACCTTTTTTGGGTATCATTTTGTTTGTTTCTCTACCCATGTCACAAGTGATAAAATAGGACCCTTGGTGCAGAGCTTAAAATTATGCCAGAAAGCAAACAGCTCCCCACCCTGGGGATTCGCCTTAAACTTGCCTGGTCTGTCCATGTTTTATGGGATTCCACCATCTCTGACACAGTCTGGGGTCCCGAGCCCCCTTCCACGCTGAGAAGAGTGGGCGTCTCCCGCCTGGTCTCCACGCCTCTCTGCTCACCCATGAGCCATTTTGCTTTTGTTTGAATTAACCCATCCTCTATCCTGATCAGGGCTGGCGCAGAACCACAGAGGGCCTACCCTGACAACAGACGGAGCCGAGGGGCACGGGCTGCAGGGTGGAGGCGAGGTGGCTTGGTCACTGCAGAAAAGGAGGGTCGGGGGGGCTGAGACACAGCCGAGGACAAACAGGAGACAGGAGTTCCCGAGATTGTTCTGCACACTCATTTGCACATCTGTCATTGGGGTTGGATGTGTGTACTGAGCTTCAGTGTGAGGCTTTTAATATGTATATCCTGGTTATCAATAAAAATTATCGAAGTGGTTGAATCCTGTGAGACTTGGCAAATATGTGCAAATCAAGTATACTTGACTTTTCAACCTCTTCTTTCAATGTAACTTTTTTAAGAAATAAAGTCACCAACTGACGTTGTCCAGCA EMBV3_03857 TACTGCAGCGGGTGTCAGGGTGAGGGACGGCCGGCGCACCCCGCCGCTCGGGGGGATGTC Variant GeneID:615387|CDK2AP1:NM_001076369:264_cdna 112^268 1 EMBV3_41459 GeneID:615387 17 GENE CDK2AP1 MGC142662 cyclin-dependent kinase 2 associated protein 1 EMBV3_35919 TTCCTCCTGGGGATCCAGGGCTTTGTCTGATCCTTGTTTTTTGACCCCACGTGTCTCCAC Gene GeneID:100336195|LOC100336195:XM_002695408:30_cdna Constitutive 0 NULL GeneID:100336195 18 GENE LOC100336195 NULL hypothetical protein LOC100336195 EMBV3_10127 CAACTGGAGCTGTCTCCTTTCTGTGGCCTCCACCACTCAGCACTTACCCAGGACTTTTAT Gene GeneID:517206|CDK2AP2:NM_001035320:24_cdna Constitutive 0 NULL GeneID:517206 29 GENE CDK2AP2 DOC-1R cyclin-dependent kinase 2 associated protein 2 EMBV3_40001 CTTCCCATGAGGACATGATTCATGACGCCCCTGGACCTGTGACGATGCCTCGGGCAACAC Variant GeneID:512530|SEC13:NM_001075565:110_cdna 117^783 3 EMBV3_24469 GeneID:512530 22 GENE SEC13 NULL SEC13 homolog (S. cerevisiae) EMBV3_43478 GAGCCTTGGAGAATGTCTTCACAGCCCCGACATCAACTCCCTCTAGTATCCAGCAAGTCA Gene GeneID:538232|SOX30:NM_001046429:14_cdna Constitutive 0 NULL GeneID:538232 7 GENE SOX30 MGC137341 SRY (sex determining region Y)-box 30 EMBV3_31758 GTTGCTACAAGATGGGAGGCATATTTGGGAAAGTGAAGAAGCGGGAGCCGGAAATTGACG Gene GeneID:786718|LOC786718:XM_002699538:26_cdna Constitutive 0 NULL GeneID:786718 X GENE LOC786718 NULL similar to hCG2038260 EMBV3_11941 TGATGGCAGCAATGCAGAAGCAGAAGATGCAGGTGGAGCAAAGAAGCATAAAGCAGCTGG Gene GeneID:100125412|LOC100125412:NM_001105031:301_cdna Constitutive 0 NULL GeneID:100125412 19 GENE LOC100125412 MGC148338 hypothetical protein LOC100125412 EMBV3_27837 ACTCCACTCTTCCCGAGAGTTCCTCACTCGATTCACAATGACATCCTTTCAAGAAGTTCC Variant GeneID:535589|TAX1BP1:NM_001046409:16_cdna 70^155 2 EMBV3_25146 GeneID:535589 4 GENE TAX1BP1 MGC128202 Tax1 (human T-cell leukemia virus type I) binding protein 1 EMBV3_02940 CCTTCCTCTTCATGGGACACGCATTTTGACACCAACTCTCTAAAAACTAGAAGCCAGCAC Gene BVT0102_146760 - 1 EMBV3_22637 GK000030.2:2198129-2327856 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16822 AGGCTCTGTGTTTTGGTGTCTTGGGGGTCCTCTTCATGGCGATCAGCCTAGGTTTCATGT Gene GeneID:512495|SLC38A5:NM_001015580:57_cdna Constitutive 0 NULL GeneID:512495 X GENE SLC38A5 MGC139490 SN2 solute carrier family 38, member 5 EMBV3_21091 TGGACAGAGTGGGGTCTTGTTGTTCAGTCACTAATTCATGTCCAGCTCCTTGCGACCTCA Gene GeneID:531391|MAPK3:NM_001110018:356_cdna Constitutive 1 NULL GeneID:531391 25 GENE MAPK3 ERK1 mitogen-activated protein kinase 3 EMBV3_20000 TCCCCATTTCATTCGTATCCAGGACGCCTTGGAGATCACAGGCACGTTCAAACTGGTGAA Gene GeneID:533016|SLC27A5:NM_001103273:52_cdna Constitutive 0 NULL GeneID:533016 18 GENE SLC27A5 MGC159643 solute carrier family 27 (fatty acid transporter), member 5 EMBV3_32953 AGCAGCCCTTTCACGTGGTCTCAGCCTGGTGGTCGGCAGCTTAGTTTCTGGATCTGACAG Gene BVT0102_167193 - 1 EMBV3_22547 GK000007.2:20397382-20436668 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02662 CTGTGTGGACCCAACCAGATCAGTCACTTTCTCTGTGACATCCCATTCCTCCTAAAGCTG Gene GeneID:788749|LOC788749:XM_002686091:39_cdna Constitutive 0 NULL GeneID:788749 3 GENE LOC788749 NULL similar to olfactory receptor Olr390 EMBV3_09346 TATCGAGAAGGACTTTAAGGCCGGGACTTTCGACCCCGAGCACCTGGAACGGTACGGGTT Gene GeneID:506521|MRPL41:NM_001099365:62_cdna Constitutive 1 NULL GeneID:506521 11 GENE MRPL41 NULL mitochondrial ribosomal protein L41 EMBV3_01594 TGAGGTACAATACCATTATGAACAGCCACACCTGCATCTCGGTGGTGATTGGGTCATGGG Gene GeneID:614298|LOC614298:XM_002687112:442_cdna Constitutive 0 NULL GeneID:614298 4 GENE LOC614298 NULL similar to odorant receptor ORZ6 EMBV3_21787 CTTACCGATATCCAAGGAGTTATTGAAGCGGTTCCGTTCAGAAGAGAATTTTTTGCATGC Gene GeneID:515595|RNF7:NM_001075720:33_cdna Constitutive 0 NULL GeneID:515595 1 GENE RNF7 MGC140726 ring finger protein 7 EMBV3_42484 CAACAGCCATGATTTCCTCTGTGTGTTCTCAAAGGATTGATGGACCTGAAATAAGCTGCC Gene GeneID:512330|RBM22:NM_001037818:49_cdna Constitutive 2 NULL GeneID:512330 7 GENE RBM22 MGC128706 RNA binding motif protein 22 EMBV3_21888 GGATACTGCTCTTTCCTAGCACAATCACGCCCTGTCTTACCTCAGTCGTGTGGCTTTAAC Gene GeneID:537603|STXBP5:XM_002690304:2_cdna Constitutive 0 NULL GeneID:537603 9 GENE STXBP5 NULL syntaxin binding protein 5 (tomosyn) EMBV3_12947 CATTTCCTCCTATCTGCATGTTTCAGACAATTAACTTCTGACAAATGTTTCCTAGCTTAT Gene BVT0102_029200 - 1 EMBV3_12433 GK000017.2:64503636-64507771 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077778 TCONS_00077768 TCONS_00077775 TCONS_00077779 TCONS_00077770 TCONS_00077771 TCONS_00077774 TCONS_00077772 TCONS_00077777 TCONS_00077776 TCONS_00077769 TCONS_00077773 1 XLOC_047142 Coding TCONS_00077779 XLOC_047142 Coding Coding MAPKAPK5 17:64505160-64538589 = TSS58030 5217 1 TCONS_00077779_1 472 0.131109833237493 14 0.844352040205815 0.00102320784149717 0.00062916100846521 0.00064265093007178 1.54721883145509e-09 0.000151439739819477 7.3399192004792e-05 0.000169515942959057 0.000138344480274456 3.88423840269652e-08 0.000169464116098311 0.000135362161047111 0.000108169008772423 1.19151053781357e-08 7.66589562596092e-05 3.18587468365078e-20 0.00401636613040125 0.000620548187177666 0.00111502715397492 0.00050948552069791 0.000650036441797018 0.000115063756591561 0.000641748024798595 0.000947605668405957 0.00228968888749527 0.000860896580289149 0.000974054063718857 0.00053659847800046 0.000644841891962277 0.000228223574011569 0.000291292312494575 XM_005217897.1 MAPKAPK5 PREDICTED: Bos taurus mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), transcript variant X1, mRNA. 0.0 9382 99.88 0.999808318957255 NM_139078.2 MAPKAPK5 Homo sapiens mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), transcript variant 2, mRNA. 0.0 2947 89.07 0.427448725321066 TCONS_00077779_1 sp|Q8IW41|MAPK5_HUMAN MAPK5_HUMAN MAP kinase-activated protein kinase 5; 0.0 964 97.87 0.99364406779661 3 coding 0 0 0 0 -0.206512674632024 0.755921040995023 -0.04617048285882 0.360895663417269 GGGAGAAGCAGCGGCGGCGGCGGCGGGCTCGGCCTCGGCTTCGCGGCGGTGCCGGCGGCGAAGGCGGAGGCGCAGGCTCCTCCTCAGGACCTGGCGAACCCGGACCTAAGCGGCGGCCCCGCGAGGCCCCGACACAGCGCCCCTGATCGGGGCCTTCCCCGCCTCGCCCTGCCCCGGGAGCCTGCCTCCCCGGCCGGGGATGAGGCCGGGAGGCGGCCGCGCGGGGCCCAGCACAAAGACTTGTTCCCGGGAGCCGCTGCTGCTGCCGCCACCAGCCTAGAGCCGCCTGCCGAAGCCGAGCCGGCCCCGGGGCCCTCGTCCCCTCAGGTCCCTGGGGGCGGCTGCTGCCCGTCTCCCCGAGACCCAGGGCCCCGAGCGCTGAGCCCCTTGTTCCCCCGGCTGCGGTGGGATCGGGCAGCTGCGCAGCCTCCGCTGCTCCCGGCCTTGCGGGCCCCGCGGAGCATGTCGGAGAGCGATATGGAGAAAGCCATCAAGGAAAGCTCCATTTTAGAAGAATACAATATCAATTGGACTCAGAAGCTGGGAGCTGGAATTAGTGGTCCAGTTAGAGTCTGTGTGAAGAAATCAACGCAAGAACGGTTTGCACTGAAAATTCTTTTTGATCGTCCAAAAGCTAGAAATGAGGTACGTCTGCACATGATGTGTGCCACACACCCAAATATAGTTCAAATTATTGAAGTGTTTGCTAACAGTGTACAGTTTCCTCATGAGTCCAGCCCCAGGGCTCGGCTCTTAATTGTAATGGAGATGATGGAAGGGGGAGAGCTATTTCACAGAATCAGCCAGCACCGGCACTTTACAGAGAAGCAAGCCAGCCAAGTAACAAAGCAGATAGCTTTGGCTCTACAGCACTGTCACTTGTTGAACATCGCCCACAGAGACCTCAAGCCTGAAAATCTGCTCTTCAAGGATAATTCTTTGGATGCCCCAGTGAAGTTGTGTGACTTTGGATTTGCCAAAATTGACCAAGGTGACTTGATGACGCCTCAGTTCACCCCATATTATGTAGCACCTCAGGTACTGGAAGCCCAGAGAAGGCATCAGAAGGAGAAATCTGGCATCATACCTACCTCGCCAACACCCTACACTTACAACAAGAGCTGTGACTTGTGGTCCCTAGGGGTGATTATCTATGTGATGTTGTGTGGATACCCTCCTTTTTACTCCAAACACCATAGCCGGACTATCCCAAAGGATATGCGGAGAAAAATCATGACAGGCAGTTTTGAGTTCCCGGAGGAAGAGTGGAGCCAGATCTCAGAGATGGCCAAAGATGTTGTGAGAAAGCTCTTGAAGGTCAAACCGGAGGAAAGACTTACCATCGAGGGAGTGCTGGATCACCCCTGGCTCAACTCAACTGAGGCCCTGGATAATGTGCTACCCTCTGCTCAACTGATGATGGATAAGGCGGTGGTTGCAGGGATCCAGCAGGCCCACGCAGAACAGTTGGCCAACATGCGGATCCAGGAACTAAAAGTCAGCCTCAAACCCCTGCACTCTGTGAACAACCCCATTCTAAGGAAGAGGAAATTACTTGGCACCAAAGCAAAAGACGGTGTTTACATCCATGACCGTGAGAATGGAGCTGAGGATTCCAATGTTGCCTTGGAAAAGCTCCGCGACGTGATTGCTCAGTGTATCCTCCCCCAGGCTGGTAAAGGAGAGAATGAAGATGAAAAGCTGAATGAAGTAGTGCAGGAAGCTTGGAAGTATAACCGGGAATGCAAACTCCTCAGAGATACTCTGCAAAGCTTCAGCTGGAATGGTCGTGGATTCACCGATAAAGTAGATCGATTAAAACTGGCTGAAATTGTGAAGCAAGTGATAGAAGAGCAAACCACTTCCCACGAATCCCAATAATGACAGCTTCAGACTTTTTTTAAAAAGAATTTGAAAATTTATTCATTAATGTATAATTTTTATGTAAATTAATAAATCATAATTTCATTTCCACACTGCTTAAAGATGCTATATAAATTTAGATACAGGATTTACTAATAGTATATATAGTTCATTTGTTTTAAGAAAAGCTCAGTTCCTAGAGATATACTATTACTTTAGGATTGTTTAGTCATCTGTTGCAAAGCTGACGGTATTGTCAAGCAAGATTGTTTTATTTGTAATAAAGCATACAAAAACCATTTGCCAGTGGTAGGCAAACGACCGACTATTTTGACCTCTCTGTGTAGTAAAGAGCTGAATCAAGTACTGTGGAATCTGGTTTCAGTTGCCCTGTGTATTTCCTCTCTGCACTGTTGGTGGATTAGCTCTGGTGCCAAGAATTTTTTGTGGATCCGTGTTGCAAACTGCCTGATGGAACTCAGAGGGTGCCAACTCCTGTGATGGAAGAGGCAGGGAGCTGAGTCCTCGTATCTCTTCTCCCTAATTCCCTAGGGAAAAGTGGTCCCATTTCTTTATTGTCATATTTGTTAAAAGGTATTGATGTGTTTCTTTAATAGGATTCTCTATTGAGTTTATTCTTTCATGTTCAACCAGAGCTTCAGCCCTGCTACTTCCTTGAAGGTCCTACCTTGCACTCCCCATTTCCTGAAGCCCTCACCAGCTCCATTGCTTCTCACTTCCTTTTATGGAATGATTTTTCTGAGAAAGTTACATATCATAAAAACTGGACTAATGGATATTCATGGGAAGGACTGATGCTGAAGCTGAAGTTCTAATACTTTGGCCACCTGATGCGAAGAGCTGACTCACTGGAAGAGACCCTGATACTGGGAAAGATGGAAGGCAAAAGGAGAAGAAGGTGGCAGAGGATGAGATGCTTGGATAGCATCACCAGCTCAATGGACATGAACTTGGTAAACTCTGAAGGGATAGACTCTGAGGGATAGTGAGGGACAAGGAGGTCTGGTGTGCTGCAGTCCATGGGGGTCACAAAGAGTTGGACATGACTTAGTGACTGAACAACAACAACTGGGTTAGCAGCTAAGATGGTCCAGGTTTCTGTCTTAAAGCTACCTTTTCTCTCTAACGTTTCTGCCTGGGTTTCATGTTGGCATCCCCTGGACTGCATGTATTTTATTTAGCACTCTTCATTTTCAGGAAGCATGGTTTTGGCCCAGAGATCAGATACTTGAATAGAAACAAGGCTCAGTGCTTTTCTACTGTGCTGTTGTGCAATGGGCTTCCATAACAAACCATTTTTATTTATTTTAGTAGTTCTTGGCTGTTGGTTCAGTGTTGGTAAATGGGAGAACTAATAGGCAAACTCCAATTCACAGAGAAGGAAAGGCTCGGTAGCCTCAGTTACTCAGTTTCATCCCACCACATTCTCTTCAATCGAAGTCAACCCCACAGAGCTCACTTACTTTCTAACTCTTCCACTTTCCTAATATGTCTTCAGTATGACATTGGGTTATGTCATGGGTTATGACACACATATGTGTGTCAATGAGTGTAGTAATACACGATAAAAATAATATCTTTTAGGAATTACCTTATACATCAGTTCCCTCATATTTTGGGGAATTTTTAATCCATGGTGTTTTTTGAGGTAAGACTCACTAATCTCAGGTGACTGATAACTCATAAATGGATACCCTGTAAAGAGAATTCAATACTTTTAAACATGGCAAAATCTAACAGGCAGCAGAGAAAAACAAACCAAAAAACTTAGCTGAGAGTTGAATTAAAAGTTGAATTCTGTTTTTCAGTGAAATGCAGTCTTATAAATCACTTTCTGCAATCAGGAAAAACTGCACTTGTTTCTGGAACAACTGAATCCCTGTTATGTTTCTTATTTTATTGCAGACGTTCAGTATTTGTGGGCTTTTCTTGTGGCTCAGCTTGTAAAGAATCTGCCTGCAATGTGGGAGACCTAGGTTTGATCCCTGGGTTGGGAAGAGCCCCTGGAGAAGGGAAAGGCTACCCATTCCAGTATTCTGGCCTGGAGAATTCCATGGATTGTATAGTCCATGGGGTTGCAAAGAGTTGGAAAGAACTAAGTGACTTTCACTTCAGTATTCCCTGGGGTGAGGAAGGCAGTAACTAACTTTGTTACTCTTCTTTTTCTTCAGAGGAACCTTCTAACAGAGGAACTAGTCTACCATTAACTTCTCAAATTTGCTATTTAGGTGTCTTCTAAAGGCTCAGGATGATTTCCCTGTGTAGTGAATTTTAGGTATGATCTAAAAGGGCATCCAAAAGATGCTTCCTTTTACTCTGAACAGAGGTTGCTCATGTTTCTTTAGGCTGAATTAAACTGGCCCCCCAAATGAGTAGAGTGTCCAGAGGGTTATGCTCAAAGTTTTAGAATAGCCTGAAAGTGAAGTGGCTCAGTTGTGTCTGACTCTTTGTGACCCCGTGGACTGTAGCCTACGAGGCTCCTCCTTTGGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCTTTTCCAGGGGGATCTTCCTGACCCAGGGATCAAACCCAGGTCTCTTGCATTGTAGGCAGACGCTTTTACCAACTGAGCCACCAGGGAAGTCCATGGAATACCCTGGAGGGTGTTTAAAAGTGGGTCCTACCTGACACAGAGCTCCATGACAAAACCGGAGGTTCCAAAAGACTCAGCACTGTTTGGTCTTTAAAGTGGGGTTTTGTTTATGGGAAGTTTGTAGACCAGTAGCATATTCTGCTTTAACTTTACCAGTCAGGTTTGGTAATAAAGCAAAATTAACATGTACTGGAAATGAAACAAAATCATCCTTGTCTCTTTTGACCTGTCCCTCTAATGCCTGTATCTGCAGAAAGTTCAAATTCTAAGAACAGTTCTCATAGGCAGGAGGTTTAGAGTCTTCAGTTTTCCTACATGATTTGCCAACCCTCTGTTTACTATATAACCATTACTTATCACTCAAATACCTTTAGATTTTACCACAATTGTTAATCTATTTGATGTGGAACAACATTTGTATTTTTCTGGCTAATGTATTTTATAAGCTAGGAAACACTTGTCAGAAGTTAATTGTCTGAAACATGCAGATAGGAGGAAATGCTTTTTAAAAAAGAAATTTGTTTTTGTATTCATTTGAGATAGAACAAGTTGAAGGAATTATTGAAGTCAAATGATTTAAATCAGATCCTGCGTGTGAATACTTTTGCGTACATGTGTATTGATGAAAATGTTTCAATTTGAGAATTGGAAAACTGGATATTTAATTTTAATTATATTTTTATTTATTTACATAGTA EMBV3_29842 AAAGGCTGAATAATACCAAATCCTCATCAGATAAAGTGGATGACCCAGTGTGCAACGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06527 ATTAAAGGGGAAGGAGCACCTTTGTAAATTTTGCCTTGGACAGACCTTGGTCTTCTTGCC Gene BVT0101_022094 + 0 NULL GK000008.2:28206153-28485634 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227243 TCONS_00227245 TCONS_00227237 TCONS_00227246 TCONS_00227239 TCONS_00227241 TCONS_00227242 TCONS_00227244 TCONS_00227240 TCONS_00227238 1 XLOC_138201 Coding TCONS_00227238 XLOC_138201 Coding Coding C8H9orf93 8:28483423-28682192 j TSS169701 4401 1 TCONS_00227238_3 633 0.0583958191320154 11 0.977913949931579 0.00103608984143514 0.000369622661574078 0.00080936855958602 0.000325391238896564 0.000618953569763456 0.000255559741550631 0.000774770128377901 0.000234444933677447 0.000548624721418436 0.00028092039858711 1.67893709662209e-05 6.49910130792367e-05 0.000151771402413279 7.58953925463179e-05 0.00055554095424342 1.32085052128363e-48 0 0 0.000178856657315475 0.00122053639175833 0.000864158993485707 4.29570563267909e-120 0 2.39492900351636e-63 0.00156489866735248 0.00152823616975728 0.0009163099962363 8.57628159593597e-07 2.48606942870945e-10 2.56422470561334e-49 XM_005209932.1 CCDC171 PREDICTED: Bos taurus coiled-coil domain containing 171 (CCDC171), 0.0 7463 100.00 0.940013633265167 NM_173550.2 CCDC171 Homo sapiens coiled-coil domain containing 171 (CCDC171), mRNA. 0.0 2856 91.83 0.452397182458532 TCONS_00227238_3 sp|Q6TFL3|CC171_HUMAN CC171_HUMAN Coiled-coil domain-containing protein 171; 0.0 1179 89.91 0.998420221169036 0 coding 1 1 1 0 -0.0243025876527144 0.927190636614445 -0.0410981140379771 0.529810555894284 GTCCCACGGAGAAGCACGTAGCTTAGTTGCGCCTGTGCAGACTGATGATACCTCACCTTTTTCTTATCTCCAATTACCTCATGCTCCCCACACCTCAGCTTTACCCAGGACCGTCTCCAGCCCGTGGCCTTTGGGGAGGTGGATGTTAGATTTGTTCTCCCATCTCTTCGCTTGGCTGCCTCGTGAATAAACCCTTTCTCTGCTGCAAACCTCTGTCTCGCCATTTGGCTCGCTGCATCTCGGGCAGTCGGACCTGGTTAGAAATTTCAAGAAATTGCTGAAAAAAATATGGAAAAATTGAACCGTATTGAGAAGTCACACGAACAATTGGTGTTTGAAAATTCCCACTTCAAAAACTTGTTATCCCAGACCAAAAGGGAAAAGACCTCCTTGCTGGTAGCCTGTGCATTGATGGCTGGCGCCTTCTATCCTCTCTACAGCCGATCATCTGCCTTATCTACACAGAGAGATTTTCTCCAGGAGCAGGTCAACACCTTTGAGTTGTTAAAATTGGAAGTTAGAACTCTAGCCCAGGCTTTGTCAACAGTAGAAGAAAAGAAGCAAGAGGAAGCCAAGATGAAGAAAAAAACATTCAAAGGATTGATACGTGTATTCCGGAAAGGTGTTATTGCAATTTTGGCAGCAAACAGACTCAAGATTTTGGGCCAGTCGTGTGTCTCTCTTTTTACCTGGATGGAGAGTTTCAGAGAAGGCATAGGCGTGTTAGTGTGTACAGGAGAGCTCAAAGACAAGCATAAATTTCCAAAACATCAAAAGGAGCAGTTACGTTGTTTGCAAGCTCTCAGTTGGCTCACCAGTACTGACCTTCTTGTTGCAATAATCAGTTCCATGGCTGAAGTACAGGAAGCTATTAGTAAAACAGATCCAAATTCCAGAATTTGTGGGCATTTACTTATAGGGGCAGCCAAGAATTCTTTCGCAAAACTCATGGATAAAATTAGTCTGGCAATGGACACTATGCCTTTGCACAACAACAGGAGCATTACATATGTAGAAAAAGACTCCCTGGTTCAGAGGCTGGCCCGTGGACTTCATAAAGTAAACACATTGGCCCTGAAATATGGTCTGCAAGGCCATGTGCCCATTTTGAAAAGCACAGCATCATTACAGAAGCAAATATTTGGATTCACACAAAGGCTGCATGCAGCAGAAGTGGAGCGTCGCTCACTGCGCTTAGAGGTCACAGAACTGAAACGGAATCTGAATGAAATGAAGAAGGAGCTTGACAAAACCCAGGGTCTCCAAATGCAATTAAATGAATTTAAGCAGTCTAAATTGATCACCCATGAGAAGTTTGAAAGTGCATGTGAAGAGCTGAATAATGCGTTACTTCGGGAACAGCAGGCTCAAATGCTACTGAATGAGCAGGCACAGCAACTACAGGAGTTGAATTATAGACTTGAATTACATTCCAGTGAGGAAGCTGACAAAAACCAAACTCTTGGAGAAGCTGTGAAGAGTCTCTCCGAGGCAAAGATGGAGCTGAGAAGAAAAGATCAATCTCTGCGTCAGCTCAATAGACATCTTACCCAGCTGGAGCAGGACAAGCGTCGACTGGAGGAGAACATCCATGATGCAGAGAGTGCCCTCCGCATGGCAGCCAAAGACAAAGAATGTGTTGCTAATCATATGAGAACAGTGGAAAATATGCTTCATAAGGTCAGAGATCAGATCTCGCTGTCACGGACTGCGGCAAGTAGGAATGACTTCACCCTGCAGCTACCCAGACTGCACCTGGAGACCTTTGCAATGGAGGGGCTCAAGGGCGGGCCAGAGGTTGTAGCGTGCCAGGCTATGATTAAAAGTTTCGTGGATGTCTACCAGCTTGCAAGCGCTAGAATTGCTACATTAGAAAAGGAAATGACATCTCATCGAAGTCACATTGCAACCTTGAAATCAGAACTTCACACGGCTTGTTTACGTGAAAATGCAAGTTTACAATCAACAGGATCACGAGACCACTCAAATTTCTCCATTCCTTCGAGAGCTGCTCTTCCTGCTGACACAACTGATGTTGGGGATTTTTTGCCGTTGAAAGCTGAACTTGACACAACTTACACTTTCTTAAAGGAAACACTTATAAATTCTGTGCCCCTGGCATCATCATCTAACTCGTCTCCAGTGACAATGTCTGCTACTGCCAAGCGACCAGCTCAGATTGGTTTATGACTTTATGAAATAAAAAGCATGCAGGAAGAGTTAACAGTACAATTAAAATTGTTTTGATGGGGGATTTTCTTATCAGTTGAATTTTGTTTCAGCTCAAGTGGCCGTGGGTTTTTAAAAATTGTGTGATATCTTGATGTGTTCAGGTATCTATGTCTCCTCGAATAATGAAATAACCAACTTTTTTTCCCCTCTAAGTTTTATTTATTATCACAGTTACTCATTTTTATGTAACATATTTTTAAATGTTAAAGAATGACACATTTTAGGTAATTTCCTTCAGACTTAAAAAAATCAATAAGCCATTTTAGTCTCTATCTATCAAAGTTGTTTCATACTTGTCTATTTTAAAGCAGGACTGCAATACTTTAATAGGATTGAGAGAGCTATTTGAAATGTATGCCAATGATTCCTGTCATTTCATGGCAGCCCTGCCATGGTTCACTGAGCCCCCTCTTCTCTCTTGTCAGCTCAACTGAAGACAAGCATTTAGTTGCAAACTTTAAGCAGGTTGTGCAAAACAGAAATGATGTGACTGCTTCTCCTCCTGCACAATAATGTCACTCCTGGTCAATGTGAGAAGGTCAGGTTGCTCCTTGTAAAGCTACATGATACCACTTGCCCATTTGAACAAGTTAACTGCTGCATCTGGTCCCTGCAGGCATTGAAAACGCCTCCTTTTTAGCAAGCCTGCTTGTGATAAGAAAGTCGAGCAGTTGTGCTGGGAAGATGTCTGTGGTGCGTTTAGGCACTTTTTAAGGACAGTTCCCACACCAGTACAGCAGGTAACGTATTTAGTATAAGCTGAAAAACTTCAAGGTAATGGCTGTTTTGACCTTCAAAATAGACTCCTTTTTTGTTTGTGTGGTTGGTAGGACCCAAGAGTGACGCCCATCTTTGATGCTGACAGAATTTAAAACAAGGCCATTGCCCTGCATTTTCTGCCTTGTAGCACACAAAAGTAAAATTGTATGTCAGGCCGAGATGTCGGGGAGCTGACAAGATGCCCCAGTGACATTTCAGCTAGAAAGAGCAAGTGTCTTGCAACCAAGTGGTCAAATATCAAATAATAGGTCAAGCAAGAAGGAGCTGAGTTCTAACCACAAAGAGGTTTCTGGGAACTTACTTGACAAGCTTTTGGGTGCTTTGTGGCTTGACAAAGTGATGTTCTGTTGGGTATCGCTAGACAGACTGTTCTTTATCGCCTTCAGAAGATCAGACATTGACATTGATTAAACTCTTTAACCCTTAAAGGTTAAATCCTTGCAGTTTGCATCATAGTAAGTGAAGAACAAAAGGCTATTTGTAATACGTTATTTGTTTTTGTTTTAATCATTTAACTCCCCAGTGATATTAACTTCTGATGTGAGCTGTACTTTCTGACGAGTTTTGATACAAAAATCCATATTTTATATTATGTTTCATTATGGAGTTTCATTATAGATACATTAGAAAATAACAGTATGTATTATGGAATCTATATTGTCTTAACTTTACAGTGACATTTGATTCAAATATACCCAATTTTTAAGAATTTGTTAATTGGCCTTGGTAAATAAAATTGGTGTACTATTTACGTATTAGCCAAATCAACCAAGTGATTTACTCCATCTGAGATAACACAGCACTATGGCTGTCATGCTGTGTATTCTCATAGTGCTGGGCTGATATAATAAGCTTTATATAAATCTTTAGAAAGCTATTTCTATGAAGTAAAATTACATCTTTAACCAAATTTCTCTTAATTCTTTCCTTGGAGTTCTTTTTATTAACCATTCTGGGTTTTTAATATTAAAGAACATTCCCTGTTTAATGTAATATAACATGTATGAAATTCAACTTGCAAATTTATTAAAACACAGAAAATGCTATTGTTTCTATACAGATCATAGAATAATTTCTGCATGTTTCAAAGTACTTTCTTTTGCCGTTCCATATAGTAATTAAGATATTGGCAATATAGGTATAAAATATGATTCATATGACATCATTGAGCTTCCAATTCTCACATTGTAGAAAAACAATGTCACCTTACATCACATATATGTCTTGTGTGTGTATGTTTGTGTTAAATCTGTTTCCATATCCTAGTAATTAAAGGGGAAGGAGCACCTTTGTAAATTTTGCCTTGGACAGACCTTGGTCTTCTTGCCTTAATTTTACAGTCTGTTAATGGGATAACACCAGAAATAAATGTATATGTCTCTCCATCTA EMBV3_21613 GTGTCCAGGCATACCTAAGTCAGAGGAGTACAGGAGAGATCAAAGTTTGTGAGGCAGTGA Gene GeneID:615039|AKIRIN1:NM_001101236:301_cdna UTR3_Alt 2 NULL GeneID:615039 3 GENE AKIRIN1 NULL akirin 1 EMBV3_05144 AACTGCAGAAGAAGTAGCCCTGCTCTGCGTGTACTTGGCCTCTGATGAATCTGCCTACAT Gene GeneID:515321|BDH2:NM_001034488:44_cdna Constitutive 2 NULL GeneID:515321 6 GENE BDH2 DHRS6 MGC127950 3-hydroxybutyrate dehydrogenase, type 2 EMBV3_25030 AAGTAAAACTGAGATATGGATGTGAGAGCTGGTAGACGATGTGGGCTCTGGCAGGAAGGC Gene GeneID:537067|CALHM2:NM_001046420:195_cdna Constitutive 0 NULL GeneID:537067 26 GENE CALHM2 MGC137966 calcium homeostasis modulator 2 EMBV3_12461 TTAGGCTTTGGCGTCGCGTTTGACCGTTTCTGTCCCCGTTATTACTTGCGTCCTGAGACT Gene GeneID:618598|CCSMST1:NM_001076512:312_cdna Constitutive 0 NULL GeneID:618598 25 GENE CCSMST1 NULL protein CCSMST1 EMBV3_08789 TTCACAGGGAAGAACACCGAAGCTTAGAGAAGGGGTGAGGAAAAGGGACATCTCGTTGAG Gene BVT0102_016876 + 0 NULL GK000009.2:96441348-96486510 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236392 TCONS_00236393 TCONS_00236394 TCONS_00236391 1 XLOC_144450 Coding TCONS_00236394 XLOC_144450 Coding Coding TMEM181 9:96447989-96485696 j TSS176965 4450 1 TCONS_00236394_1 469 17 0.882432504110752 0.000955978803133921 0.00115113656902775 0.000690390233535965 0.00031032264795129 0.00105815528590912 0.000118056049270477 0.000831481625126837 0.000307989221818298 2.82517496768489e-05 6.79978432247575e-05 2.05739476168998e-05 0.00031004117888502 3.79951259447671e-08 0.000355790779915678 8.18597770333808e-05 0.00147922609419541 0.000234910244273593 1.9818443133964e-09 0.0018423343166632 0.0012072885123453 0.000637985830156685 0.000399649861179159 0.000658170643777407 0.000260977206543045 0.00146181263929669 0.00129075493384939 0.000859756013225423 4.61466976989354e-05 7.66910086973617e-05 0.000161378478006548 XM_865749.6 TMEM181 PREDICTED: Bos taurus transmembrane protein 181 (TMEM181), 0.0 7952 100.00 0.990561797752809 XM_005267074.1 TMEM181 PREDICTED: Homo sapiens transmembrane protein 181 (TMEM181), 0.0 1840 80.84 0.439550561797753 TCONS_00236394_1 sp|Q9P2C4|TM181_HUMAN TM181_HUMAN Transmembrane protein 181; 0.0 879 93.60 0.997867803837953 1 coding 0 1 1 1 -0.0838755698147629 0.435516456121266 0.00846586342420821 0.875375565118132 GTGACCCCAGGGCTCTCGGACGTCGGGGTGGAGAAAGGCTGGCGCCCATGCGGCTCTACACGCTCTCCAAGCATCACTTCGTCCTGGTGTTCGTTGTCTTCTTCGTCTGCTTCGGCTTGACCGTCTTCGTTGGGATCAGAGGACCCAAAGTGATCCAGACTTCTGCAGCTAACTTTTCACTAAATAATAGCAAAAAGCTAAAGCCAATTCAAATATTTTCCAAACCGCTGTCTACATATAATCAGCAGCTGTGGCTGACGTGTGTTGTCGAGTTGGATCAATCAAAAGAAACATCTATTCAGACAACCTTCACCATGACTGTTAAGGTTGATGGTGTAGCTCAGGACGGGACCACCAAGTTCATCCATAACAAAGTTCACAACCGGACGCGGACGCTCACGTGTGCAGAGAAATGTGCAGAAATCATCGTGGCTCACCTCAGCTACCTGAATTACACTAAGTATACAGTGACTGTGGGATTCGAACACCTGAAGCGGCCCATCAAGGAAATGAACTTCACCTGGAAGACTTACGACCCTGCGTTTTCCCATTTGGAAATCTGGTTCCGGTTCGTCTTTGTGGTGCTCACCTTCATTGTCACTTGCCTGTTCGCGCACTCTCTTCGCAAGTTCTCCATGCGAGACTGGGGCATCGAGCAGAAGTGGATGTCCATCCTCTTGCCTCTGCTGCTGCTCTACAACGACCCGTTCTTTCCCCTGTCCTTCCTGGTGAACAGCTGGTTCCCGGGGATGCTGGACGACCTCTTCCAGTCTGTGTTCCTGTGCGCCCTGCTGCTCTTCTGGCTGTGTGTGTACCACGGGGTCCGGGTGCAGGGAGAAAGGAAGTGTTTGACTTTCTATTTGCCTAAATTCTTCATCGTTGGACTACTGTGGTTGGCTTCTGTTACCCTCGGAATATGGCAGACAGTCAATGAATTACATGATCCAATGTACCAGTATCGAGTTGACACAGGAAATTTTCAGGGAGTGAAGGTTTTCTTCATGGTGGTGGCTGTCGTGTACATCTTATACCTTTTGTTCTTGATCGTGCGGGCCTGCTCCGAGCTGGGTCACATGCCTTACGTAGATCTCAGGTTAAAATTCTTGACCGCGTTGACTTTTGTCGTGCTCGTCATCAGCATCGTCATCCTTTATTTAAGGTTCGGAGCACAAGTGTTACAGGACAATTTCGTAGCTGAACTGTCGACTCACTACCAGAATTCAGCTGAATTCTTGTCTTTCTACGGCTTGTTGAACTTTTACCTCTACACTTTGGCCTTTGTGTACTCGCCCTCGAAGAACGCCCTGTATGAGTCGCAGCTGAAGGACAACCCTGCCTTCTCCATGCTCAACGACTCGGATGACGACGTGATCTACGGGAGTGACTATGAAGAGATGCCCCTGCAGAACGGCCAGGCCATCCGGGCCCAGTACAAGGAGGGCTCCGAGAGCGACTGAGGCCCGGCCGCCGGCCCCGGCGAGCGCGCCCCGGCCTGCCTTCCCCGGACCCGGACCAGTCTGACGTGCAGAGACGCCCTGGTCCTCATTCGTTTACACATGTTTGAAAGGAAAACCAAAACTGAGGGCTAATTTAAATGTTGGGCCTAAATTTACCGTCACACTGATGGCGTTTATTTGGGAAGAGAGGCCCTGACAAAAAGTTTTAGCCAAATCATTTTTTCAGATTCCAGATGAGAGACAAGCTGTTTTCAATGGTAAGAAAGAAATCATTCCTGTTCTTAGTAGAGAGAATTACGTGCTTTTAAAAAAAAAGGTTTGCTGATTTTGAGTTCCCGGAAAGCCTTTGTGAGTGTGGCCCGCAGCGTGGTGGCACTCCCTTCTCGCTCCCTTTCTCCCCTGCCCCGTGGCACCAGCTGTCAACCCTTCACAGGGAAGCCCATTTCTGAGGCTGCCCCATGAGGGCGGTCCTTCCCCGCTGAGCGGCCGGGGCTCCGGATGACCACGCATCTCCACTTCGGGTCACCGGGGTCGGTTGCTATGAGACGTCTACGCAAGGGCTGTTGAGGGGGAGAGGGAGGCTGGGTGGGCAGGTTCGAGGTGAAGACCGCCACCAAAGCAGAGCCAGGGTCTCAGGAGTTCTGAGGAGGGTTCGACAGGGTTCCTTAAGGATTGACAGGTCGTCAGCTCCAGTTGACAGGGAAGGGTCTCACTGTCACGAGTCTTCTAGAGGTCTGTGAGCCTTATGTCATGAATATGGATGAGGCCCCTGTGGTTGGGGTGGGGAGGAGGGTACCCATGAAATTCCATTGAGCAGTAGTAGCTCTGTTAAGGACGATACTCCTGTAGAGCTTTTTTTTTTTTTTTTTCAATAAAAGCTAAACAAGTGACTGATAACAATACTACAGATTCGTTATTGCCAAAAAGCTCTTCAGCTTCACATTTGGAAACTAGGTGCAAGAAGGTAACATATTTTTAGATGGTTTATGGAAGAACATCTTTGGGGAGAAGGTAATTTGTGGGGAATCATTCCTGCCTCGTGAGCTTCACACGGTCGTCAGGTAAACGGGTGAACTGCTCTGCGTAAGTGCCGTCTGGAGCTGCTGAATCCAGCAGAAGGCCCTGGAGACCCCAGCTCCTTTCTATCAAGGCCAAGTGTGGGAGGTGGAGCTGTCTCCTTTGCCTTTCCTCTGGCGTGCACACTCGTCTCTTGAACGGTTCACCTGTGAGCACTGCAGACATCCTGATGCATGCCATCTGGGCAAACACAACAGGTAGGGACGTGATTGTTCCGCCCTGCAAACAGCGCCTCCACTTTCTCCATCTATGCATCGACTCTCCAGCTACCACGCAGAGCTCAAAGGCATAGTCCTCTTCAGGTAGTGCCGGGCCTTAGAGAGCTTCCTGAAAGACTATTTATTATGACTTTGTACTTTTCTTCTTAATTTAACGTACCTTTAATATGGATTCCATTTATATTTGTTTTTAAAACCCTGTAAATAAGAAAGTTTGAATTCAAACAGTTGTGTTGTTGCAAGGGTAATTCAAGTTTACTGGTTTTTACATCTGCAATGATGTGATTCCTTTTTTTTGATTCTGTATATTCAGAGGTATTGAAAAAATTTTCTGTTACCAAACTTACTTCTATTAAGACTCATATAAGTAATTTTATGTAAACTGATGAAAAGTTACTTGTGCTGATTAATGTATTCTAGTATGTTACAGTTTACAAGTTTTAATCGTTATAACTGTCCATAATTTGGAACGCTTTTACCAGTAATTGTAAAGTATCTGAGGCATTTAGCTGTACACATTTAGGCATTTTTACAACTTATTCTTGTCCTGTAGTGTAACTGTTAACTGATGATTGATCTTCGTACGTTGATTCTTGATAGCATCAGGTCAGTGAAATGAAAAATAAGGGAGTATTTATTAACTTTCTGTAACTAGATTGGAAACAAGGAAGTTATAAAAGAAAGTACTTTAGGGGGAAATGGTTCTTTATTAAATCATGCATTTTCAATTTATCTTCTCTGGTGTATCATGTATGTCAACATATTACATCTTCCATGTAAAAATGTGCTTAAAGTATATAGCATTTAGCATGTGCCATAGGTACTAGGTTATAACACTAAAGTCTGCCAGCAACCTTAGATGGTAGCAGGAAAATTATTATTTTTTTGGTCTTGGAGGGTTATCAGAGTTCTGTAAACTAAAATTAAAAATCCAAAGGGCTGACTTTAGTTCTTCCATGGTAACGGCGTGAATAACATCATCTTGGGGATAATTTTTTATACTGGTCTAGTCTGGGGAACCTGGAAGATGACCACAGACCTTTCAGTTTCCCTAGAGAGCTTCATTATCCATGAGGATAAAGGTCCGCTTGATTTATTATTAAATCATTAAAGCAGCGCAGTGATGCAGTTTTCTCTCTTAAGCCCCATTTGAAAGGCTAAAGAAGGGGATATATAAAATATATTCAAGGTTTGTAAGATTGTTCCTGTACATAATTACAGATTGCAGTAAAAGTTCAGATTCAGTATGTAAAGCCAGCTTGCTAAATGGGCAGGTTACAGGACAAATGTCACCAGCCTCAAGTACTCTGTGAACTGTTTACTCAAGGTAAAGTTACTGTTCAGTATGTTACGTACGACGTGGTCAGTACCTTATTTCCTGGAATCCTCTTCACAGGGAAGAACACCGAAGCTTAGAGAAGGGGTGAGGAAAAGGGACATCTCGTTGAGGACTGGACGTAGGACACAAGAATGTAACGCCAGACTATGAAACACAGAAGGATTTTCTGCTACTGGAAACTGCCTTTTTACAAAAGGATTGTAAATGTTTGTAAAATAAAACAACTCTAAATCTTAGGCTCAATGGGAAAGCTAGAGCTGAATATTAGACCCTGGAAGTGCGTCAGCGAGCACACTACCCCGGGTCACAGAATGATCACTGTAATCAGAAGTCAATAAACGTTTATTTACGGCAGATTC EMBV3_34701 GATCTCCAACGACCAAAGGAGCTTCTGCCACTGGCTGTTCTCCAAATTCTGCCTTGGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22697 TCTGTATATCTCAAAGACTACGGTGATAACAACAGGGCACTAAGAAAATGGATGACTGAC Gene BVV0102_057485 + 0 NULL GK000002.2:85726758-85760261 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105626 TCONS_00105629 TCONS_00105630 TCONS_00105631 TCONS_00105627 TCONS_00105628 1 XLOC_062619 Coding TCONS_00105626 XLOC_062619 Coding Coding GTF3C3 2:85759001-85787449 j TSS77899 3967 1 TCONS_00105626_3 698 0.0703302243508949 17 0.861145287728056 0.00292910703161599 0.00187720082360089 0.00104907889222304 0.00171271525893492 0.00159899628907415 0.000923557838285152 0.000729694344435763 0.00137669023419964 0.00120840159349841 0.000210431377750954 7.33764395275049e-05 8.37549791628622e-05 4.73163568063761e-07 0.00027162852627982 0.00048382897638422 0.000251176054201251 0.00199099004486975 0.00296270029248817 2.75590783076809e-06 0.00112678337279162 0.000358861071408147 0.00133664111185089 0.00202575671984895 0.00243552346671458 4.98881602622158e-21 0.000648935737313089 4.58147353001891e-08 0.000507019609369428 0.000247399159457991 2.26843476199415e-11 XM_002685471.3 GTF3C3 PREDICTED: Bos taurus general transcription factor IIIC, polypeptide 3, 102kDa (GTF3C3), mRNA. 0.0 5106 99.96 0.714645828081674 NM_012086.4 GTF3C3 Homo sapiens general transcription factor IIIC, polypeptide 3, 102kDa (GTF3C3), transcript variant 1, mRNA. 0.0 3743 89.95 0.697252331736829 TCONS_00105626_3 sp|Q9Y5Q9|TF3C3_HUMAN TF3C3_HUMAN General transcription factor 3C polypeptide 3; 0.0 1304 96.07 0.945558739255014 14 coding 0 0 0 0 0.0466051551807693 0.706118361549655 0.014438553480737 0.754615212832582 CATTGACCCCTTTTACAAATGAGCAAACTCAGGTGAAACATCAGATGGAGTCAGTAAGTCAGTTCACAAGGTCTTTGCTTCCATGCTTGGAGAGAATGAAGATGAGGAGGAGGAAGAGGAAGAAGAGGAGGAAGAGGAGGAGGAAGAAACGCCTGAGCAACCCACTGCTGGCGATGTGTTTGTATTGGAGATGGTTCTCAATCGTGAAACCAAGAAAATGATGAAAGAGAAAAGACCTCGGAGTAAACTTCCCAGAGCTCTGAGAGGTCTCATGGGTGAAGCCAACATTCGCTTTGCTCGAGGAGAACGTGAAGAGGCAATATTGATGTGCATGGAAATCATAAGACAAGCTCCTTTAGCTTATGAGCCATTTTCCACTCTTGCTATGATATATGAGGACCAAGGTGACATGGAGAAATCATTGCAGTTTGAATTGATCGCTGCACATTTAAATCCCAGTGACACTGAAGAATGGGTTAGATTGGCAGAAATGTCCCTGGAACAAGACAATATTAAGCAGGCTATTTTTTGCTACACAAAAGCACTTAAATATGAACCTACTAATGTCCGTTACCTTTGGGAGCGATCAAGCCTTTATGAACAGATGGGAGATCACAAAATGGCAATGGATGGTTATAGGCGTATTTTAAACCTTTTGTCTCCATCTGATGGAGAACGATTTATGCAGTTGACTAGAGATATGGCAAAGAGTTACTATGAAGCCAATGATGTTACTTCAGCTATTAGCATAATCGAAGAAGCTCTCTCAAAACACCAGGGCCTAGTCTCCATGGAAGATGTTAACATTGCAGCTGAACTGTACATTTCTAATAAACAATATGACAGAGCTTTGGAGGTAATTACAGATTTTTCTGGAATTGTGCTGGAAAAAAGAACTACAGAAGAAGGCACTTCGGAAGAGAATAAAGGCGGTGACAACGTTATCTGTGCTATACCTGATGGTGTGCCAATAGACATCACAGTGAAGCTGATGGTCTGCCTTGTACATCTCAACATTCTTGAACCACTTAATCCTCTGTTGACAACACTAGTGGAACAGAACCCTGAAGACATGGGAGACCTCTATCTTGATGTTGCTGAAGCTTTCTTGGATGTTGGTGAATACAATTCTGCACTTCCCCTCCTTAGTGCACTGGTCTGCTCTGAAAGGTACAACCTCGCAGTGGTTTGGCTTCGGCATGCAGAATGCTTAAAGGCCTTAGGCTACATGGAGCGTGCTGCCGAAAGCTATAGCAAAGTGGTTGATCTGGCCCCTCTTCATTTGGATGCAAGAATTTCGCTTTCCACCCTTCAGCAGCAGCTGGGTCGTCCCGAGAAAGCTCTGGAAGCCCTGGAACCAATGTATGATCCAGATACATTAGCACAAGATGCCAACGCAGCGCAGCAGGAACTAAAGTTACTGCTTCAACGTTCTACTCTATTATTTTCACAAGGCAAAATGTATGGTTATGTGGATACCTTGCTTACCATGTTGGCCATGCTTTTAAAGGTAGCAATGAATAGAGCCCAAGTCTGTTTGATATCCAGTTCCAAATCTGGAGAGAGGCATCTCTACCTTATTAAAGTGTCAAGAGACAAAATATCAGACAACAATGACCAAGAGTCAGCAAATTGTGATGCAAAAGCAATATTTGCTGTACTCACGAGTGTCTTGACAAAAGATGACTGGTGGAACCTCCTTTTGAAGGCCATATACTCCTTATGTGACCTATCCCGGTTCCAGGAGGCTGAGTTACTTGTTGATTCTTCATTGGAATACTGCTCATTTTATGAAGACAAGCCAAAACGCAAAGAGTTAGAATACTTTGGTCTGTCTGCTGCAATTCTGGACAAAAATTTCAGAAAGGCATACAACTATATCAGAATAATGGTAATGGAAAATGTCAATAAACCCCAGCTCTGGAACATTTTCAATCAAGTTACCATGCATTCCCAAGAAGTAAGACATCATCGCTTTTGTCTCCGTTTAATGCTGAAAAACCCAGATAATCATGCCCTCTGTGTCTTAAATGGACACAATGCATTCGTGTCTGGTAGTTTTAAGCATGCACTTGGACAGTATGTGCAGGCCTTTCGCACTCATCCCCAGGAACCTCTCTATAACCTCTGTACATGCAAAGACCTTTATTCACATGGCATCCCAGAAGTATGTATTTAAGAGACATGCTCTTATTGTGCAGGGCTTTTCCTTTCTTAATCGATACCTCAGTTTACGTGGGCCTTGCCAGGAGACATTCTACAACTTGGGCCGTGCCCTTCACCAACTGGGGCTGCAACATCTTGCAATCCACTATTATCAGAAGGCCCTGGAGCTCCCTCCACTTGTGGTAGAGGGTATAGAAATTGACCAGATAGACTTACGAAGAGATATTGCCTACAACTTGTCTCTCATATATCAGAACAGCGGGAATACTGGAATGGCTCAGAAACTTTTATTTACTTACTGTTCTATATAAAGCCCCTCAGCTGGGGAAGGAGCTTGGGCAGCTGCTGTGCATGGACCAGTATTTTCTGTCTCAGGGCTTATTATTAACCCCAAGATGGACATAAATTCATGATTATCTGTGTTTCATTTTTAATATGTGATAATTATCTTTTGATAGATTGGCAAAATTATCACTCCTACAAGAATTTTATATTGTTCTGTCATTTTCCTTTACCAGTTTTTTGTAAGTTGTCCCCCAAACTGAAGTGGACATTAGTAGCCATTGAACCAGCATTGAGTTGAGTACACTACTTTTTTTCCACACCATTTATTCATTTGTGTATGTAATACCACATATTAAACACCTGCTGTATACCAGGCACTGTAATAGTTGTGTTTGGAATACAGTAGTAAGAGAGATGTTACCTCTCAATACAGTTCTTTGAATATAGACCTTGAGCATATGTTTATTTGAAAGAAATATTTGCTACATATGTATTTCTACATACATCATTGTTGTCAGTCATCCATTTTCTTAGTGCCCTGTTGTTATCACCGTAGTCTTTGAGATATACAGAAAAGGAGGTTGCTTAGTAAAAGAAAGACAAATTGGGACTCTGATGTCAGCACAATGATGTAATTCACTTTGCTCCTTGGAAAATTGTTTTAAATGGTTATGTGGTGGGAAGACAAGTAATTGAGCTCATCTTTTATTTTTCACCTGCATGTATCTTAGCTATAAAGGCAGGCCTGGGAGGCTGGGCTTAATTCATAGCAACCTATTGTGATGCAAATTTTTTTTAAAAAAGCATTTTCAGTGTTTGGCTTTCTGGCCAAAAGAAAAAAAGAGAACTAGATTCAGTAACATGATCTGGTTTCCATTTTAAGATCACTAGGAATGTAGGAAGACTAGGGAATTTTATGTATGAAATAAAGTATTGCTGATGAAAAGACCCTGATGCTGGGAAAGAGTCAGGGCAGGAGGAGAAGGGGACGACAGAGGACGAGATGGCTGGATGACATCACTGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCAGTTCATGGGGTCGCAAAGAGTTGGACACGACTGAGTGACTGAACTGAACTGATGAAGTAGAAGCAGATTAAAAACCTTTTACTTATCTCAAATATTGTATATTATTGGGTCTAAGATAATAGTATTTGTTAGACATACTGTTGGTTTAATAATAGCTTTTTAGAGTTTCTTTTTAGGAGGAAACAAATGCTGTAGTAAATGTCCATGTGGATTTTAAGTCCCAGTCCACTTGTATGTGGAAAACAAGTATGAGACTTAGGATGAAAGAAGTACAGGGGACTTTAAGAATTCTTACCACTATTTACACTGTATATATAATTTTGTAGTTGAGAAGCAGAATTGGTATGTAATAAGTAAATGTATGGTACTCTGTGTGTGTGTATGTGTATATATAGAATTTAAATAAACTTTATTTTTGTAATTAA EMBV3_04053 CAAGAAGGAAATTCTGAGCAAGCAGAAAAAGTCTATAAAACCCTGCGAGACGCCGTGGTG Variant GeneID:504418|SLC25A19:NM_001045887:341_cdna 80^576 2 EMBV3_04037 GeneID:504418 19 GENE SLC25A19 MGC137486 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 EMBV3_04364 AGCAAATGCTGCCGGAATACTTGGCATCCACACAGCAGAACTAGTACAGACCACCAACTC Gene BVT0102_090506 + 1 EMBV3_41983 GK000017.2:63660160-63670248 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081388 1 XLOC_050268 NonCoding TCONS_00081388 XLOC_050268 NonCoding NonCoding - 17:63667186-63667983 - TSS61328 797 1 TCONS_00081388_2 68 0.820577164366374 1 0 0 6.30391564300955e-05 0 0 4.95576625167005e-05 0 8.7804939950482e-05 0 9.89980056549576e-06 5.16247740471024e-06 0 0 5.40014032153878e-05 5.90212740777091e-06 0 0.000198832808142441 0 3.14816603686157e-05 0 0 0 9.3107530949846e-06 0 0.000147242651741027 0 0 0 0 7.30930229895126e-05 0 NM_152355.2 ZNF441 Homo sapiens zinc finger protein 441 (ZNF441), mRNA. 9e-07 59.0 75.00 0.116687578419072 0 noncoding GTGGTCATATAAGCTATATAGATTTACAGCAGAATACAACAAAACCACAAAATTAAGAAAAGTATAAAGCTCACTCATCATACTATAATCCACATAGCCACTGAAAACATTGAGGTCTTCATGAAACCAACATTACAAAGGAAATTTAGGAACACTTGCTAAGTACACTAATATAAATATGGATATCTAGGAATAATATGAGAAAGCATATGTAACAGCAATGCAGGGAAAAACTATAAACTGTAGTTACAGAGTAATTAAAGAAGAAAATTAATGGAAAGAAGTTCCAAGTTTGTGGACTGGAATTCTCAATATTACATGGATGTCATTTTCCCTGAACTAATTTATGGAATTCTAATCAAATGCCTCCCTGTATTTTGGGTGAAAATTCACAAACTGAGTATAATATTAACATAGAAATAGACAGAGCCAAGAGAAGACATTAGTTTGGATAGAACAGAGTTTTCTACAAGACACTGAGAATTAATACCAGGCTATCATAATTAGTAAAGGTAATATTAAACCAAGGACACAAAAATTGATCAATGATATAACACAGGTTCACACACAGATGACTCTGGACATATGTCTGAAGTGGTTCTGCAGAACACTGGGGATGGACGGTCCCTTCAGCAAATGCTGCCGGAATACCTGGCATCCACACAGCAGAACTAGTACAGACCACCAACTCACACCCATTTGTCTGTGTTTTGATATGATAGTCATAAAGTCTTGCCAACTTTACGTCTTGAAGCTTTCTCCCTGTGTTTTCTTCTAGGAGTTTTTCAGTTTCGGCT TCONS_00077741 TCONS_00077742 . 3' 1113 TCONS_00077741 TCONS_00077742 . 3' 1909 EMBV3_38364 CACAGATTTTTTCAGCATGTCTTTAGGGATCCGATCTATAGACAACCACCACCGGCTGCC Gene GeneID:540184|MGC159550:NM_001110083:109_cdna Constitutive 2 NULL GeneID:540184 10 GENE MGC159550 NULL hypothetical LOC540184 EMBV3_14726 CCTCTGGGGGCCCTCTTAGAGTCCATCTCCCAAAGTAAGAAGGGAAAGGCAAATTTCTAA Gene GeneID:512397|LOC512397:XM_002692387:302_cdna Constitutive 2 NULL GeneID:512397 13 GENE LOC512397 NULL similar to Uncharacterized protein KIAA0552 EMBV3_10901 CCAAAGTGGCGTGGCTCCCCGGGCACTAAGGATTCTCAAGAAAGACATGTCTGACAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03025 GTGATAAACTTGGACGGCTGCCTCGACCCCTCGTACTACACTCTTATAGACTTGACCCCA Gene GeneID:538583|ENPP4:NM_001081535:320_cdna UTR3_Alt 2 NULL GeneID:538583 23 GENE ENPP4 MGC152041 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) EMBV3_06201 CATATGCATCAGCATCTCCTGGATCCTGCCCATTACTTACAGTGGTGCCGTGTTCTACAC Gene GeneID:783649|LOC783649:XM_002707839:20_cdna Constitutive 0 NULL GeneID:783649 9 GENE LOC783649 NULL similar to trace amine associated receptor 6 EMBV3_18556 ATTCGAGGAGAGGTAGTGAAGGCATTTGTGGTCTTGGCCCCACACTTTCTGTCCCGTGAC Gene GeneID:512227|ACSM2A:NM_001101952:338_cdna UTR3_Alt 2 NULL GeneID:512227 25 GENE ACSM2A ACSM2B MGC179444 acyl-CoA synthetase medium-chain family member 2A EMBV3_15682 ATTCGGTTATTATGAACAAGGTCCTGTATAGCCGGTTAGCAGCCTCCTGCTGGACTGGTG Gene GeneID:785397|LOC785397:XM_002697390:48_cdna Constitutive 0 NULL GeneID:785397 23 GENE LOC785397 NULL similar to Olfactory receptor 110 EMBV3_27471 ACAGCACTGGTTACAGGTCCATGGCTCGAGATATAAGTCCTGATCTTCAAACTAAATAGT Variant GeneID:505006|RWDD2B:XM_002684614:90_cdna 151^267 3 EMBV3_16674 GeneID:505006 1 GENE RWDD2B NULL RWD domain containing 2B EMBV3_23554 GGGCGCCTCGGCTGGTCACCGGACCCTCAGAGCTCTCTTCACCCTCAAGCCATAGAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36658 ATCAGACATGCGTGGCCCTTCATTTATGGATACTGAGTGTATGTAATGCAGTGCTAGCCC Gene GeneID:541071|NCOA7:NM_001102254:18_cdna UTR3_Alt 3 NULL GeneID:541071 9 GENE NCOA7 MGC151725 nuclear receptor coactivator 7 EMBV3_09353 GCTCCGTATTCTAATGCCAACCTGCCTTGAGGAAATTGTGGAAATCATAGTGCTGTTGCC Gene GeneID:513500|LOC513500:XM_002695868:357_cdna Constitutive 1 NULL GeneID:513500 19 GENE LOC513500 NULL similar to Uncharacterized protein C17orf68 (HBV DNAPTP1-transactivated protein B) EMBV3_06108 CCTTCGTGTTCACCCAGGGCCACTCTGTCTGCAACCGCTCCTTCTTCCCATGCTTCGACA Gene GeneID:100336841|LOC100336841:XM_002686616:132_cdna Constitutive 0 NULL GeneID:100336841 3 GENE LOC100336841 NULL arginyl aminopeptidase (aminopeptidase B)-like 1-like EMBV3_16931 TCAAAAACATTTGAGCACGTGACCAGTGAAATTGGAGCAGAGGAAGCCGAGGAGGTCGGA Gene GeneID:512456|PSMD7:NM_001034423:201_cdna Constitutive 0 NULL GeneID:512456 18 GENE PSMD7 MGC128537 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 EMBV3_10027 TGCAGAGCTCACTACTATGATTCACCGGGATGTATCTGCGGAACTGGCGGAGTTCTTCCT Gene GeneID:507746|LOC507746:XM_002707705:13_cdna Constitutive 0 NULL GeneID:507746 18 GENE LOC507746 NULL similar to osteoclast associated, immunoglobulin-like receptor, isoform 4 (predicted) EMBV3_39255 CCTCCTTGCTCACCATTCTCCTGAGTCTCTGGCCTCTGAAGATCCTAGAACCAACAAGTA Gene BVT0102_169509 - 1 EMBV3_02051 GK000002.2:46759005-47068528 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23019 GCTGGGCATATTTGTGTACGTTTTTGTGTGAACATATGTCCTCAATTCCTTGGGTGTATA Gene BVT0102_357256 - 1 EMBV3_40425 GK000002.2:91180863-91203325 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105827 TCONS_00105828 TCONS_00105826 1 XLOC_062652 Coding TCONS_00105826 XLOC_062652 Coding Coding SUMO1 2:91154086-91182735 = TSS77995 4190 1 TCONS_00105826_3 208 0.296658711217184 5 0.853916503769897 1.6955384971107e-05 0.000105623448913138 0.000112665076117194 1.14501505593692e-24 1.80710890780825e-16 7.72044786877295e-05 8.08616900019291e-05 2.55081164001666e-05 0.00012187319317643 9.77188333692592e-06 1.65291949200367e-05 6.81190862491569e-99 2.21350589595554e-05 8.60059806508779e-05 1.0631776829488e-05 0.00011950573249716 6.76933978498787e-05 0.000349428034271326 0.00014121573838001 4.83245595245679e-05 2.52377813328748e-05 2.68730197442809e-116 1.96709891765564e-05 3.05190623589522e-05 0.000160716956247776 9.91552265506783e-06 0.000104675708593241 3.89072482393116e-19 1.44433734655583e-18 3.99858533350962e-11 XM_005202669.1 LOC614993 PREDICTED: Bos taurus uncharacterized LOC614993 (LOC614993), 0.0 2268 100.00 0.299761336515513 NM_003352.4 SUMO1 Homo sapiens small ubiquitin-like modifier 1 (SUMO1), transcript 0.0 2053 89.94 0.363961813842482 TCONS_00105826_3 sp|Q5E9D1|SUMO1_BOVIN SUMO1_BOVIN Small ubiquitin-related modifier 1; 9e-70 212 100.00 0.480769230769231 2 coding 0 0 0 0 -1.737152409724 0.0422116708952499 0.0532189326223057 0.304733641301381 CAGCCAGGGATCAAACCCATGTCCCCTGCATTGGAAGGCCAATTCTTAGCCACTGGACCACCAGGGAAGTCCCTCATCACTCAATTTTAAAGCACTTTGATCACCCCCTGCAAAAAAACTTTGCCCTTTAATAGTCACTCCCATTTCCCCTCAATTCTGCAGCCCTAGTAGAATTCACTGAAGCAGTAGCCTGCTAATCTATTTTCTGTATCTATAGACTTACCTATTCTGGATACATCATATAAACAATCATACTTTGCAACTGGCTTCTTTCACTTAGCATAATGTTTTCAAGTTTCATCCACCTTGTATGAGCTCTTCATTCCTTCCCTTTTGTGCCTAATAACTTTTCTTTGTATGGCTATACCACTTTTGGTTATCCATTAGTCAGCTGATGCACATTTGGGTTGTTTTTCTTTTGCTGCTATGAATATGGCTGCTGGGCATATTTGTGTACGTTTTTGTGTGAACATATGTCCTCAATTCCTTGGGTGTATATCTATTAGAATTACTGGGTCATGGTAATTTTATACCTAATAGTTTGAAGAAGGCAGGAATGTTTTTCAAATGAAGTGTTTTCCAAAGCATTTTATGCTCCCATTAAATACAACAGTTCCAATTTCTTCAGAACTTATTTTTTTTTCGGTTATAGACATATATCCTAAAGGATCTGAAACGTTATCTCATTGTGGTTTTAATTTGCATTTCCATGATGGCAAATGATGTTGAGCATCTTTTCGTGTCCATTCGTATATCTTCTTTACAGAAATTTCTATTCAGATGGTTTGTCCATTTTTAAATTAGATTGTCTTTTAATTGTTGAATTATAATAGTTCTTTATGTATTCTAAATATTAGACCTTTATGAGATATATTATTTGCAAACATTTTCTCCTATTCCTTAGATTGTCTTGATGAGGTCCATATTATTTATTTTTCTTTGGTTGCTTGTGCCTGATCCAAAGTCAAGAAGATTTATACTTAATGTTTTCTCCAGAGTATTTTAAGGTTTCAGCTCTTACATTTAGGCCTTTGATTCATTTTAACTTTTCAAATGTTATGAGTTAGTAATCCAGATTCATTCTTTTATATATGGATATCCAGTTGTCCAAGTAACTTCTCTTTTAGTCTGTTCATTTATTCTGGAATCTGAATTCAATTCCGCTTATCCGTATCCTTATGCTCTATGCTTTTGCCAGTAGGGCCACTAATTTTGTTTTGTTTTGTTTTTTAGAACGAACTCATGGAAAGACCATTCATTAACTCAAAATAACCAAGTCAAGGGTGGGAATCAGCTTCTTCGCACTACCAGTTTAGGAGCTAAAGATGCTCCTAAAGTTTCAGGAGCATCTTTTTCATCAGCAGCCATCAAAATCCCACCCAATGCGATTACGTTTTGTTTTGTTTGTTTTAAATTAATGTCATTGTGTTTGGCCAGGGTTGGTTAACCGAAAATGTTACCTCCAGGCTAAGAATCACTGGTATTCAGTCCAGTTTATTTAGGGAGGTAGATGAGCAAGGCCAGAAGTAGACAATAGAAGTACTTTGGCTCAGCCTTCAGAAACGCGCAAGGTGTCGGCGGGAGGAGGCTGGCCTGTCAGTACGGTTCTAAACAGAGACTGGGCACCGGAAACTTTTCCTCAGGGGATGGACTCGGGCCCGAAGCACAAGGCCTATCTCGGTGCTGCGGTGATTAATTCATCTGTGCGACCACAACTAAAGCCCGCTCTCAATCCTCCAGCCTCCGGGGAGCCCCGCCGCCCCCAACGAGTTTTCCCGCGTCGCCTTTCCTCTTTCCCCTCTCCGTCCTCACTGAGCGTAGCGGAAGTGACGCAAGGCGTAGCGGAAGTCCCTCCAGCCGCGGTGTTGTGCTGTTGGGTAGAGAGACGGATTTGTAAACCCCGGAGCGAGGTTCTACCTACCCGAGGCCGCTGGTGTGCGGAGACCCCGGGGGAAACTACCGTCACCATGTCTGACCAGGAAGCAAAACCTTCAACCGAGGACTTGGGGGATAAGAAGGAAGGAGAGTATATTAAACTCAAAGTCATTGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAAGACAGGGAGTTCCCATGAATTCACTCAGGTTTCTCTTTGAAGGTCAGAGAATTGCTGATAATCACACTCCAAAAGAACTGGGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACAGGGGGTCATTCAACGGTTTAGATATTCTTTTTATTTTTTTTTCTTTCCCCTTAATCCTTTTTTATTTTTAAAAATAGTTCTTTTGTAATGTGGTGTTCAAAACATAATTGAAACTGGCACCCCATCTCTTTAAAACATCTGGTAATTTGAATTCTAGTGCCCATTATTCATTATTGTTTCTTTTCATTGTGCTGATTTTTGGTGATCAAACCTCAGCCCCCTTCATATCACTCTCTCCTTTTTAAAAATTACATGTGTGCATAGAGAGCCCGCCTTTTCCAGGACTGTGCATTTGCAGGCTTGTGATAAATAAGATCAACTAATCCAAGTGTTCCTAATGACTTTCCAATTGGCCCTGACGTTCTAGCATGTGATTGCTTCACTCCTGGACTATGACTTTCAGTGGGAGATGGAAGTTTTTCGGAAAACAGAACTGTGGAAAAATGACCTTTCCTTAACTTGAAGCTACTTTTAAAATCTGAGGGTCTGGACCAAAAGAAGAGGAATATCCATTTGGAGTCAAAATGACAGAGAATAATGACTAACTCCAAAGATGGCTTCACTGAAGAGAAAGCATTTTAAGATGAAAGAAAAATCTTGTCAGAAGATCCCAGAAAAGATCTAATTTTCATTAGCAGTTAAAGTTATTCATGCAGAAGTGTATACAACAGAACACTGCTCTTTTTGACTTTATTTGTACTTTTTGGCCTGGGATATGGGTTTTAAATGGACAGTGTCTGTACCAGCTTCATTAAAATAAACAAAATATTTGTAAAAACTGTACCCATGTTTATTTTATTTTTAATTGTACAGAAAGAAAAAAAGAAAATGCTTAAAACATAAGGTTTTTTTGCATCATACTGGAAATTATTGTTCATACATGGTACAGATTTTTTTACGGATTATGTGGTGATGATCATGACTTTGAAGCACTGAAAGTTACTGAAGTGCCTTCAGAATTAAGGATTTAATTAAGGTCACAATACCTTCTTAAATACTCACTGTTGTTTTTTAAAAAAATTTGATATTCCTGTATGGTGCATTTATATGATACAGTTACCCAATATGTTGAATAAATGGGCATGCCAGAAATTCTTAATTGATATTGATAATTTCAGTTTTTCCCTTAACAATTTTCAAAATGTTCTCTGTAGTTAAGGTTGTTTATATTTTATTTCTTTATATCATCTTTTCAACTGTAAAATTAAAATACTAAATTAGTTCCTCAATTAGAGGGCTTAACTTTTTCTTTTAACTCCTTAATGAATCACAGAATTCAGAATATATATGCACATATGTAATCCAATTTTGTATTATTCCAAGTAGAATGTCATCTAGCTACTTGAGAAGAGCAAATAAAACCTATCTCTAATGCAAACTATTATAGTTTGAATACCCTCTCAAATTTCCTGTTGAAAAATAATTGGCTTGTCTTATAAATCTTATTTTGACCATACCTGAAAAATTATTTGTATCGTACATATATAGTCTAGGTAAATTAGAACTTTTAGACCATTGTGTTAAATAGTACATAGAAATAAGGCCCATTTCCAGAAAGTCCTCATTGAGTTGCATATTTCTGTCAGGCCTGAGAAAACTGATAGGCTATTTGAGCTATCCAGAATGCGCATATATGTAGTTTGGTATCAGCTTTGTTTGCATGTCTGAAGACTTGGCATTTAGGTAGTGGAGCTTAGCTATGGGGGATACTTGATTTTAGTTTATTGGATTCTTCTAAATGCTGTGCATTCTGCTATGGTTAACTGAAAAATGTGCTTATCTGGTTAGTAGTGCTGATAAAATAGGCCTTTAACAGCAACAGTTTAATAGAATATCGATAAGATTTGGAAGGCACCTCGAATAACATTTTAGTGTAGCCACTCTACCTGGTGCTTGACTGCAACTTTTGAAATTTGTAAAAGAAGAGAGAAAATAAAA EMBV3_23525 TGACTTCCATTTATGCCCCACTGTGTCAGTTCAAGCATCAAAATACCTTGCGTCTGAGGC Gene GeneID:539120|VEZF1:NM_001102227:42_cdna UTR3_Alt 2 NULL GeneID:539120 19 GENE VEZF1 MGC152435 vascular endothelial zinc finger 1 EMBV3_42391 CACAGACCTGTCAGCCATTATGCCCAGCCAGTTGAGGCCGGTTACGTATCAAGACTTTGA Gene GeneID:540478|FIGN:XM_002685336:182_cdna Constitutive 0 NULL GeneID:540478 2 GENE FIGN NULL fidgetin EMBV3_02278 CAGCTTGTGCCAGTGATGAAGGAGAAGTAATTGTGTTTGGAGGGTGTGCCAATAACCTTC Gene GeneID:535436|KLHDC2:NM_001014948:103_cdna Constitutive 0 NULL GeneID:535436 10 GENE KLHDC2 MGC133703 kelch domain containing 2 EMBV3_06435 AGAAGGCCAAGAAGGACCTGGAGGAATGGAACCAGCGCCAGAGTGAACAAGTTGAGAAGA Gene GeneID:281698|CLTB:NM_174277:81_cdna Constitutive 1 NULL GeneID:281698 7 GENE CLTB CLTLB clathrin, light chain (Lcb) EMBV3_03797 CCAATAACTGGGAATTTTCCTCTTTGGCTAGTTATGGTGGTGGGGTTCTCTGCCTCTGCC Gene BVT0102_270698 + 0 NULL GK000002.2:122697743-122722282 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106520 1 XLOC_062826 Coding TCONS_00106520 XLOC_062826 Coding Coding LOC100847376 2:122719802-122723091 = TSS78388 1104 1 TCONS_00106520_3 119 0.139492753623188 2 0.664841849148418 0.000468312799620592 8.19164881418163e-05 0.000142498241492632 6.0175005707596e-05 0.000451680079751592 5.83215445418993e-05 0.000110929205687377 0.00120008760477487 7.14685299226689e-05 1.11806517868631e-05 2.07353743333483e-06 5.82991282341964e-05 2.59898919867193e-05 4.26086046824443e-06 3.03674540561718e-06 0.00229665913300632 0.00228582027644779 6.81818943676248e-05 7.14494478821376e-05 8.46817337556589e-05 0.000393214541973715 0.000349523416491237 6.64785533102616e-05 0.000698527849883948 1.88273849076058e-05 0.000370143031547806 5.30720912620899e-05 0.000191407976444506 6.15618754539477e-05 0.000136146919939095 XR_230440.1 LOC100847376 PREDICTED: Bos taurus uncharacterized LOC100847376 (LOC100847376), 0.0 1992 100.00 0.999094202898551 0 coding 0 0 0 0 0.0317502111401393 0.757495202763721 0.0301463683193236 0.669372599364948 TCGCCCATCCCCCAATGCTCCCAGGGGCGAAGGGGCCCCGGTGGCACCCAGTTTGCCTACGTCAGCGCGGGTCCCGGGCTCCGTGTCCCTGCCCCGGGCTGGTAAGCCCTGCTCCCTTCCCTGGCCTCAAGGCGCTCTTCGGAATCTGAGAAGGAAGCAGTTGGGGGGGGCACGGTGCCCGAGAGCTGGGGCGCAGGCCACCGACATCCGTACCCTGGTCCCTCCCGGAGCTTGGGGTCAGAACAGAGATGAGAAACCAGAGGAGAAAGGAAACTCCCCCTTGGGCATGATGCCCACGCCGGGAAAGCGCTGGCCGACTCTTGGCGGCGCAGGCATCATCTCGATCTTCATTTTACAGCAACCACAGGCTGGAAAGATGGAGAAGAGGAGAGATGAGTAACCAGGAGAGAGCCAATGAGATGGGCTGGCAGCACCGGATGATCCGTGGGGCCATGGGAAGGCGGGCGACGGAGGCCTACTCAGCATCTTCAGCTGTTCCCTGGCCCTCCCTGCCATCTGGACGCCTCCGCTACGCTAGGGGATGTGCTGCTGGCACAGGAGAGATGCGAGAGGTAGAGGCCAAAGAAGCTGAGCTCGGAGGCTCCAGTGACCCAGGATATGGAGACCCTCCCTTTACCCCGTCAGGGCCTAAGTCTGTGGATGCTGACCACCCTCAGCCCACCCCCAATAACTGGGAATTTTCCTCTTTGGCTAGTTATGGTGGTGGGGTTCTCTGCCTCTGCCTGCCATGAAATCAAGTCTTAGACAACCTTTCCCTCCACACCCTCATACCCCTCCCTTGGTGCATGGTCTGTTCAGAAGCAGTATCTTTGGGAAGAGGCCTGGCTTCTAAATCCCAAGCCTGCCACTTACTAGCTAGAGACCCAGAACTAGTGCCTTCCCCCTTTTGAGTCTCCTTTCCTCCCAAATGGAGGGAGGCCATCTACTTTTCTGAATTGTCATGAGGATGGAAAGAAATAACAGATGGTAAGCCTCACACACCATGAATGGTGACCCCTCACCCCTTCTCCTTTCTGGGTCTCCTCCCCAGGGCAGTTGACCCAGCAGTGCTCAAGAATAAACCAAGGCTCTTTGAGACCCATA EMBV3_24588 AAGCTTTGTCTGCCAATGTTGTGTTTTCTGGTTCACACCATACTCCATAGTACCGGTCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19768 CGCCGCAGGCCCGAGCCCCACCTCCAAAGGGCCACCTGGCCCAGGGCCAGACATGACCAT Variant GeneID:617968|C25H7ORF47:NM_001102315:326_cdna 797^909 3 EMBV3_34346 GeneID:617968 25 GENE C25H7ORF47 MGC148922 chromosome 7 open reading frame 47 ortholog EMBV3_38772 CTGCCCTGTCTGTATCACTTTCACCACCAGCATCTGCGCCGGCTACTGCCCCAGCATGAA Gene GeneID:280839|LHB:NM_173930:23_cdna Constitutive 0 NULL GeneID:280839 18 GENE LHB NULL luteinizing hormone beta polypeptide EMBV3_14679 TTTCCACTCTAATTTCAGTCTTCCTTCTGTTAGCTTTGGGTTGTTTGCTTTTCTAGTTCC Gene BVV0102_172713 + 0 NULL GK000016.2:37860905-37864901 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10677 TTGACCTTTTCTGATCTAGTGATTTTGGGTTTTTTTGTACTGTTATACTAAAAAAGCTCC Gene GeneID:497024|NFE2L2:NM_001011678:202_cdna Constitutive 0 NULL GeneID:497024 2 GENE NFE2L2 NRF2 nuclear factor (erythroid-derived 2)-like 2 EMBV3_12120 GATCCGTGGAGAGCTCACTGCCATCAAGAATGAACTGAGAACAGAGAAGAGCCTACAAGC Gene GeneID:767883|CCDC160:XM_002699559:55_cdna Constitutive 0 NULL GeneID:767883 X GENE CCDC160 NULL coiled-coil domain containing 160 EMBV3_00660 ATTTGTGCAAGTGTTCTGAGTCTCAGTGTTGTGTCCAGACTATGTTTTTCCACAATGTGG Gene GeneID:507091|MPHOSPH8:XM_002691851:137_cdna Constitutive 0 NULL GeneID:507091 12 GENE MPHOSPH8 NULL M-phase phosphoprotein 8 EMBV3_11467 AAGGGAAACCAGGTTCCTTCACATCCCCAAGGCCACCTCCTGTGATGAGGTTAGCGTCAC Gene GeneID:538819|SCAMP4:NM_001024566:83_cdna Constitutive 0 NULL GeneID:538819 7 GENE SCAMP4 MGC137831 secretory carrier membrane protein 4 EMBV3_22077 AGGTGGCATCTGGAAAAGGGAAACTCGCTCCTGGATTCGATGCTGAGATGATCGTGAAGA Gene GeneID:534182|FKBP9:NM_001046372:57_cdna Constitutive 0 NULL GeneID:534182 4 GENE FKBP9 MGC128053 FK506 binding protein 9, 63 kDa EMBV3_04906 TGCTCTTGGCAGACCTGTTGGCACTGAGTGGGAGTCCCGGAGGAAAACCCCAGTGACTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24433 GGACAAAAGAATGAAACGACACAGCCCTAAGACATGCTGCCGTGCTAATGATGCCTGAGG Gene GeneID:617776|LOC617776:NM_001105635:135_cdna UTR3_Alt 1 NULL GeneID:617776 19 GENE LOC617776 MGC151752 hypothetical LOC617776 EMBV3_15240 TGCAGCTTGCTTAGCACATGTAAAGTTGTAGTCATATATTTATGAGACCACTGCTTACAG Gene GeneID:617385|RAB22A:NM_001099165:1318_cdna Constitutive 1 NULL GeneID:617385 13 GENE RAB22A MGC140196 RAB22A, member RAS oncogene family EMBV3_10093 CTGCCACTCCAGTTTGGGTGAACAGAGATCGATAAAGACCGGAGGGAACATTCTAGGGTG Gene GeneID:508492|GSDMC:NM_001046004:11_cdna Constitutive 1 NULL GeneID:508492 14 GENE GSDMC MGC129112 MLZE gasdermin C EMBV3_19068 TTTGGGAACACTTGGCTGAGATGTTACAACTTTGAAGCTAACAGAAAGGTAACTTCCCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27086 CAATTAGTTTCAGTTTTGTTTCTCTTTCAGGAGCCCGGCAACAGCCGCATCAGGGTCTCC Gene BVV0102_149791 + 1 EMBV3_01088 GK000025.2:36236130-36264280 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38915 AGTGGTCCCTTCCTATGACGCAGCTACCGTAACAAATCAGAACACTTCAGTGCGTTTCCC Gene GeneID:518810|SOHLH2:XM_002691802:443_cdna Constitutive 0 NULL GeneID:518810 12 GENE SOHLH2 NULL spermatogenesis and oogenesis specific basic helix-loop-helix 2 EMBV3_24409 CAGCGTGGTCAACAATTACAGCGAATGTAAGGCCCTCATAGATAGCAACCAAACTGCCCG Gene GeneID:539718|SCN2A:NM_001144109:127_cdna UTR3_Alt 2 NULL GeneID:539718 2 GENE SCN2A SCN2A1 sodium channel, voltage-gated, type II, alpha subunit EMBV3_25739 GTATTCTTCATGTGTGTCTACTATTGTCTCCTGCACCCCAACGGGCCCATGCTGAGTCCT Gene GeneID:518090|XKR7:XM_002692433:427_cdna Constitutive 0 NULL GeneID:518090 13 GENE XKR7 NULL XK, Kell blood group complex subunit-related family, member 7 EMBV3_30581 GCAGTGGCTTGGGTTTCTATCGAGCAACAACTTAGACACGTGACTGTAATATGCTGCAAC Gene GeneID:514916|LOC514916:XM_002687397:116_cdna UTR3_Alt 1 NULL GeneID:514916 5 GENE LOC514916 NULL similar to dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 EMBV3_11419 CCCACTGATGGGGTCGCAGGTTCGAGAAAGGGGTAATGTGAGAATTTAACCGTCATTCTG Gene BVT0102_324916 + 0 NULL GK000012.2:36881476-36901231 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21847 ACACTACTACTCAGGTTACTCCTCCAGCCCTGAGTACTCCTCCGAGAGCACGCACAAGAT Gene GeneID:528562|ELFN2:XM_002687693:75_cdna Constitutive 0 NULL GeneID:528562 5 GENE ELFN2 NULL extracellular leucine-rich repeat and fibronectin type III domain containing 2 EMBV3_20840 AGAAGACGGAAAATGGGGCGTCGGCATGAGCCCCCAGCCTTCTCATGCCGCACCTACATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10029 GCCGCAGCTCAATGCTAAGCGGCCACTCTTGGCAATACCAGAACTTCAAAACATAGCTCT Gene BVT0102_217267 - 1 EMBV3_37735 GK000012.2:18991286-19014240 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036380 TCONS_00034707 TCONS_00036379 TCONS_00034708 TCONS_00034704 TCONS_00036381 TCONS_00034706 TCONS_00036382 TCONS_00034709 2 XLOC_021142 XLOC_020738 Coding TCONS_00036381 XLOC_021142 Coding Coding CAB39L 12:18991198-19107404 j TSS26500 4412 1 TCONS_00036381_3 328 0.223708068902992 11 0.962127275074222 0.000673206571201344 0.00043341790378653 0.000167274128138437 0.000497468525790175 0.000692084427921798 1.78823993540402e-91 7.67900401724174e-05 0.000177889408846555 0.000473451004196974 3.02180397682043e-21 6.67178260450553e-32 1.72315009711978e-60 2.17847969571468e-06 0.000115238111634663 5.23389908346256e-09 1.17762107914632e-11 0.000390192940498355 5.61062978001294e-07 0.000175609679571649 2.66147705087395e-09 3.13926994512468e-05 1.15771421484885e-09 1.57801112754687e-06 0.000861077088826157 0.000319174862224458 0.00104293151843259 8.63127509495437e-06 1.74573947286092e-08 1.36885897830928e-05 8.82314836105455e-12 XM_005213610.1 CDADC1 PREDICTED: Bos taurus cytidine and dCMP deaminase domain containing 1 (CDADC1), transcript variant X1, mRNA. 0.0 4383 98.64 0.56663644605621 NM_001079670.1 CAB39L Homo sapiens calcium binding protein 39-like (CAB39L), transcript 0.0 1458 88.60 0.257026291931097 TCONS_00036381_3 sp|Q9H9S4|CB39L_HUMAN CB39L_HUMAN Calcium-binding protein 39-like; 0.0 543 96.00 0.835365853658537 1 coding 1 1 1 1 -0.0758863822553976 0.583073110906704 -0.000614141464384176 0.989198508506223 CCAATGCGGATATCCACAGTCGAGAGGCCGGCATCGCTGGAGTGGTGGTGTCTGTTTCCTCTGGATATATGCATCAACTATTGAGAAGAAAGAATATCAAGAGCTAAATGTTCTATTTAAACAGTAGTTGCTGCTCAGAAAATAAAGATGCCGACCCAGAGTCAGTGGTTTATACGTTCTTCATGCAAGAGCATTATACTAAAGGAGAGAGTAACCTGTGTTGATCAGTGACTGTGGTGAAGGCTGAGAAAGTTGAAGCAAAGCTGCAGGTGATACAAACTACTAAGTGTTCTATATTGCATGAAGAGATTTCTATAGATGAAAAAATGCCTCTGTTTAGTAAATCACACAAAAATCCAGCAGAAATCGTGAAAATTCTGAGAGACAACTTGGCCATTTTGGAAAAGCAAGACAAAAAGACAGATAAGGCTTCAGAAGAAGTGTCAAAATCACTGCAAGCAATGAAAGAAATTCTGTGTGGGACGAGTGACAAGGAGCCCCCAGTGGAAGCTGTGGCCCAGCTCTCACAGGAGCTCTACAACACCGGGCTGCTGGTGACACTCATAGCCGACCTACAGCTGATAGACTTTGAGGGAAAAAAGGATGTGACCCAGATATTTAACAACATCCTGAGAAGACAGATAGGCACTCGGATTCCTACCGTGGAGTACATTAGTGCTCATCCTCACATCCTGTTTATGCTCCTCAAAGGCTATGAAGTCCCACAGATCGCCTTACGTTGTGGTATTATGCTGAGAGAATGTATTCGACATGAACCACTTGCCAAAATCATCCTCTTTTCTAATCAATTCCAAGATTTCTTTAAGTATGTCGAACTGTCAACATTTGATATCGCTTCAGATGCCTTTGCTACTTTTAAGGATTTACTAACCAGACATAAAGTGTTGGTAGCAGACTTCTTAGAACAAAATTATGACACTATTTTTGAAGACTATGAGAAACTGCTTCAGTCGGAGAATTATGTGACTAAGAGACAATCTTTGAAGCTGCTAGGTGAACTGATCCTGGACCGGCACAACTTTGCCATCATGACCAAGTACATCAGCAAGCCAGAGAACCTCAAACTGACGATGAACCTCCTCCGGGATAAAAGCCCCAACATCCAGTTTGAAGCCTTTCACGTCTTTAAGGGACCTTCTGAAAGATATGCCCGCCCAACTGAGAAAAATCTGGATTCTGGGGGTTCCAGTTCAAGAAGGTGGAGGATGCCTCCGTCCCTGCCTTCCCCCACCCCACGAGCGCTGCGGAGGGAGAACCCGGGAAGACAGCGGTGCGGAAGCTCCAGTGACTGATCAGCCAGGTGGGAGGCGGTCAGAGGCTCTGGGAGGCACTTCTTCAACAAGAAAAGCTTTTTAGGACACCCAGTGTGCTTGAGTAGGGAGAGAAGGTTACACAGCTGGGAGAAGGGTTTGGTTACAGGTTAGCAATAAAATATACAAAATCAAGGTCCCTGCAGCCCCACACAGAAAAAACAAACTTGAAATGCACGAAAATACATTTTATACAGAAAGTCATCACAGTACATAACGTGATAAAGCTGTGCGTAGCACTTAGAGTCATAATACCAAACAATGAATACTGATGCAACCAAATTGAAAGAATATTAGGAGGATGGAGAGATGGGAAGTGTGTGCTGAGGAGAGGGAGGTGAAAGAAAGCCCTTCCATGATGGAAATTCAAAAGAAAATACCTAAAACTGAAACACTATTAAGAAACATGTGATTTGGAGACAAATACAAAGTCAATCAGCTAAAATCCTTGAGCCTGGTGGCCTCTGGGGAGGGGTGATACAGAAGACAGAGTGGGTCTTACTGTTTCAAAGAAAGGTTCATAGATCTGTTTTGCTCATTTTAAATTTGTAGGTGTAATTTTACTTAAAAAATGACTTAATTTACAACGATAGAAGTCTTTTATTACTGTCACATACATGTTAAAATCAGCTAATACGTCAACAGGTACAGGGCAAATAAGCACGGACATTAAAAACAAAACTGAAAATGTAAAGAGAGAAAAAAACCAAAGCTGATATGATTTCAGGCCCTTGTGACATCCTGAGCTAGACTTTAAGAAATCATTCACCTTCTGGACTCTTGTGCTTCCAGTTCTGCAGAGGAGTATTCTAAATAGATGAGATCTAAGTTCCTTTGAAATCTGAGTCTGTTTAAGTGCAGTAGTTGAATAGGGTAAACACATTTTATGGACGCATTTCTAAAGGGTATTCCATTTAAACAGGCCTTGTTTTCAACTGGTACTGATTATTAGGGCTTTTCACTTTTCTTATATGTAAAAAATATGTAATAATTTTAAATGATCACAGAAAAACCCCTTAATATAACACATGAAATGGAGGTTCTAAACTGTTCCTTGACTTAATAAGCAGTAGTAACAGCCGCAGCTCAATGCTAAGCGGCCACTCTTGGCAATACCAGAACTTCAAAACATAGCTCTAAAGTGGGTTAAAAGCAGACTGCTGTGGTAGATCTGAAAGCTCAACTGTTCGTGCATAAACCGAGGAAGATTTATGAGAAGGTATATTCTCAAACTCATTAAGTAACTGAGGAAGAGAAACCCATGGAAAAGCCGAATAAAAGAAAAAGCGCTGGCAGTGATTAGATACAGGTAAATCCTCACATACCCCACCTAACAGCCGAGCGCCGAGCCAGGCCTGCGCTCATCCTACCTCCAGTCGGCAAAGCTGCTGTCCTTGGCAGTAAACAAATGTAGAGCTCTTTTTCAAATTATACATTTACTACGTCTTCCCAATCTTTGAAATTAATGGTGATGTATTTTTAAGGGCAAGTTCCGATTTCTCAGCCTGAGGGGTGACCCCTGTTGACTGTGGGTGACTAGATTTTAGGCTGCACTGTTGCTGCCCCAGGGGGCTCCTGGTGCAGGTTAGCAATCTCTGCATGAGTTCCCAATCGCTTCCCTTTCCTACTTCCCGGGGTGACCACCCATCTTCATTACTTTCTCAGATGTTCATCTCACCCCCACTGTTTGCCGGCCCACTCCCTGCAGCCCCTTCAGGGCCTCCACTTCTACGCGGCCTCCACTTCTACGCGGCCTCCACTCCTACAGGCCCTGCTTCCGTGACTCACCCAAGTGTCTGCCTGTCCTCCTATGTGTTCCTTCCACCACTGTTCCTTCAGTTACATCCACAGGGCAGTTCTCAACCTTGAAGGTCGTCAGTCACCTTCAGGGAATGCTGGCCGCAGCCCCGGAGTTTGATTCAACAGGTCTGGGTTAGGGCTTAACAATGTGCACTTCTAACAAGTCCCCAGATGAGGCTAACGCTGTTGGTCCAGGGACCCCACTCTGAGAAGCACTATTATTAATACGTGACTTTACGCTTACATCTGTCACTAGACTGCAAGTTTCTTGAGGTCAGGGAGCATTTCTTACACGTCTCATCTCCAGGGTCTAGACAGTGTCCAGCAGTCATTCAGTCAACAAATATTTATTGAATGCCTGTCACATGCCAGACACTGTTGCAGGCACTAGATTCAGCAGTTAAAAAAAAAAAAATTTACACACACAACAGAGGCTAAGCGAGCTGCTGTCCAAACAGGGGCACCGGCCCACGTGCAGGGTGGCCTGTGCACTCTCCTGAGACTGGTAGGAGGCCCTGTGAGGATACGAGAGGCCCCGGGGAGAAAGTGGGCGACAGCCCAGGTGAAGCTGACTCCCCACACAGAGCCCGTCACACCCCAGGGCTGCCTGCGGGCCACTGGCCAAGTGGCTCCCTCCCTATCTCCAGGAAAGTACAAAGCCTGTGCCTTCATCTTTGGGCTAATTTTCTGAAAGTTTCCTCAACAAATAAAAAATGAGAGGACTCATGAAGAACCATCTGGAAAATAACTGAATTGACCATCATGTTCACTGTCAAGGCTTTCAGTATTCTTAAGGTTTGCAAATGTTTTTATAAGGCCTTCCATTCAGAGCCCTGAAACGCTCTCTGCTAATTATATGGAGGGGATAATGGGCAGCATTTATGAATGAATTCCAGACTAAAATATTTCTTCTCTTGTTAGTGGTTTCAAGAGTCAGTGAGATCAGAGAATAATATTGTCCGAGAATAATGCTATCTTCCTATTGCTGCCCTGAATCAGTCCAACAAGTGATCATGATTTTTACACACTGAAAGACTGAAAAAAAAAAAGAATAACCTTGTTAGGAACACACTTTTATAATGGAGAGCAGGTCCACCAAATTCATTTTTATGACTCCAGGCTAATCAAGTAAATTCTGATTACCAGAAAGCTTTGGGTATAAATGGGGCCTTTTGGTGAATCACACATTGACTTAAAAATGGTCAGGTTGCTGTTTATTTCCCTGGAGTAGATTACTAATTATCACCTTCATAATCCAAAGGGATTAATATTTCTGAAAAG EMBV3_00042 GCTGATGCTTGATATCCGACAGATTTGTAGAGAGACCCTGATTCATAGGAAGGGAGTCAC Gene BVV0102_109622 - 0 NULL GK000018.2:65506515-65519302 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00087771 TCONS_00087769 TCONS_00087768 TCONS_00087770 1 XLOC_052590 NonCoding TCONS_00087770 XLOC_052590 NonCoding NonCoding - 18:65516912-65518716 - TSS65131 1064 0.193609022556391 2 0.410981697171381 0 9.44401171317961e-07 0 0 0 5.60316043779609e-07 4.21610214574131e-07 2.34401267779783e-30 0 1.13688143611293e-05 2.15149100163258e-06 0 4.20073396925413e-150 8.94736208846681e-06 0 0.000251094488459715 0.00193485223425978 0.00131092641987689 2.11815444451061e-06 0 0 7.63179297005193e-57 0.0010594667001195 0.00141169267827682 0 0 0 1.00304672295971e-06 0.000114885135366269 2.03152588538072e-05 XR_238555.1 LOC101901949 PREDICTED: Bos taurus uncharacterized LOC101901949 (LOC101901949), 0.0 1503 100.00 0.781954887218045 0 noncoding TCGCCGCCTTTAAAGAGGCCAAACACCAATTGTTGTGTTGTTTTCTAACATGAATGGATCTGTTAGGGGAAGCACACTGATTGAAACCGCCCACCCTGGCCAGGCACCACAGGAGCCATTTGCATGAGTTGTATTGACAGGAGGTCCTGGTAAGGAACACAGAACTAAATAAATAAGCCTCCACCAACCAGAAGAGTTCGGGAAAGGTCAAAAGGAGACACCACAGGTCCGACCACCTCCCAGAATCCTTCTCTCTGGCATCCATCTTGGCTGAACAAGGCATGCGCCACCAGGAAGGACTCTGAGTCAGAATGACCAGCTAAGGACAACCCAGAAGCTAATCCCATCTCCATAAAACCGGAGACTGCGAGTCACGCAGCAGAGCAGTTCTCCTGGGTTCCCTTACCCTACTGCTCTCCACCCAGGTGCCCTTTCCCAATAAAATCTCTTGCTTTGTCAGCACATGTGTCTCCTCGGACAATTCATTTCCGAGTGTTAGACAAGAGCCCAGTTTCGGGCCCTGGAAAGGGTCCCCCTTCCTGCAACAGATTTATTTTTCTGTACCTATTAATATAAACATGTTTTATAATTCATTAGTATTATGTCGAATCTGTTAATGTATTTCTAATACTAAACCATTCTTAAGTTACTGAGATGCTTTCAACTTGTATTACATTCTGGAAACACAGCTGAATTTAATAAGTTTTATGAGACTGTTATTCTAGCACCATAAAATTAGTTGAAGAACATGAATCTCTGCAAGATTTAGAATAAGCTTAGATTCCTCGTTTCAGTGAATGATTCATGTGACTCCCTTCCTATGAATCAGGGTCTTTCTACAAATCTGTCAGATATCAAGTATCAGCAAGTATCAAAGAGATTTGGTATTTGTTAGTTTGATCAAGAAAGACATGCGTTTTAGGGAGGTTCAAAAGGGAGATGACATATGTATAACTATCAGGCATATGTATATGGCTGATTCATGTTGATGTATGGCAGAAACCAACACAATATTGTAAAGCAATTATCCTTCAATTAAAAATAAACCTTAAATAAAGAAAGAC TCONS_00085056 r 5' 996 TCONS_00085056 r 5' 224 EMBV3_08521 AGGTTTTCTGTAGCATAGAGGATGGGTAGGTGCAAAAAGCTGACTTCTGAAACCCCACAC Gene GeneID:783569|CSTF2T:XM_002698363:139_cdna Constitutive 0 NULL GeneID:783569 26 GENE CSTF2T NULL cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant EMBV3_30284 TGGAAGCTAGTCATTGCAGGCATCTTAATTTGGGGCCCATCCTCCGATTCAGCCCTTTCT Gene GeneID:518086|CANT1:XM_002696154:87_cdna Constitutive 0 NULL GeneID:518086 19 GENE CANT1 NULL calcium activated nucleotidase 1 EMBV3_17826 CTTTTTAACTACGACGACCGCGGCTGCTTGACCTTCGTCTCCAAGCTGGACATACCCAAA Gene GeneID:508402|ARPC1A:NM_001075359:119_cdna Constitutive 0 NULL GeneID:508402 25 GENE ARPC1A NULL actin related protein 2/3 complex, subunit 1A, 41kDa EMBV3_36308 ACCATGAAATCAGAACGTCATCTCCCCACGTGCAATAGACATGGAATGTGTTCCTGGGGG Gene GeneID:280716|AK2:NM_173889:13_cdna Constitutive 2 NULL GeneID:280716 2 GENE AK2 MGC137216 adenylate kinase 2 EMBV3_18763 AGCATTCCAATGGCCAGCAACAACACCGCCAGCATAGCACAAGCCAGGAAACTGGTAGAA Gene GeneID:281203|GNG2:NM_174072:10_cdna Constitutive 0 NULL GeneID:281203 10 GENE GNG2 MGC137473 guanine nucleotide binding protein (G protein), gamma 2 EMBV3_11000 AAACCCCCTGTAGAACCCCGTACTAAAGTCTCATTTTTCCCCTTCTGTAAGTTACTCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00184 GTGGCTTATCAGAATAAGATGCTTGTAAGGTTTACAGTCGGGTGGGCAAAGGGATGCCAC Gene BVT0102_145473 + 0 NULL GK000011.2:87473863-87525612 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14734 TCCCGGCCCGTAGTGTGGCAGCAGCTTCAGCCCAGGAGTTAAAGTCACTGTTTGAAAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35242 GTGGGATGGGGGCGGACCCTCAGCAAAATCTCACCCTATATGAAGCTTACACAAACCACT Gene BVV0102_066152 + 0 NULL GK000017.2:20616265-21277907 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39289 TCCCGGGCTCAGCTTCGCCAGCTCTTCAAGGTGTGGCATGCTGGTTGATCTGTGCAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05762 AGGGCTGGGACCGGAGGCAGGGGCTAGAAACTCGGTCTTACCTCTGTAGCGCAACTTTAA Gene BVT0102_368108 + 0 NULL GK000003.2:15374036-15399754 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175694 1 XLOC_105473 NonCoding TCONS_00175694 XLOC_105473 NonCoding NonCoding - 3:15374350-15375182 - TSS130453 832 1 TCONS_00175694_2 122 1 0 0.000163529916445823 0 0.000745214246398391 0.00135740906760514 0.00263177206315498 8.59872387555575e-06 0.000133175723368318 2.13271066988238e-05 0.000398299830940168 0 0 4.29770863225255e-06 0 5.65384222250669e-06 6.4865344310956e-05 0.00219038524607265 0 6.03145325236549e-05 0.000275804579049407 0.000700126490418642 0.000485278857316976 0 0 0.000745541776746204 0.0016155341293083 0.00202388102651576 0.000816900549526587 0 0 0 XM_005203607.1 FDPS PREDICTED: Bos taurus farnesyl diphosphate synthase (FDPS), 0.0 1498 100.00 0.996394230769231 0 noncoding 0 0 0 0 0.0920743030215553 0.394070282932482 0.0182254998042033 0.702700988342336 GCAGGGGCAAGCACCAGAGGCAGATGCACGCTGTCAGCTCCCCAAGTCACCCTCCAACCTTTCACCTCTGTACCCAGAATGCCCCACTCTCTTCTGGGCTAAGCTGGAGGGCACTTACAGAAAGAAATGCAGGGAACAAAAAGTACGGCTGGGTAACCGAGACTCAGCTGATCACACTTAAAATAAGAAGGCTAGGACTCAAAGCCACCTAACTTTACCCGGTTGAGGAACCGTTAACGCCTCCACCAGGGAGCCTCTGGAATTGTTCTACTCTTACTTTCTTCCTCTAAATTCTGGAGCACAGACTGGAGAATCCAGAGTAAAGGACCTCAGGACCGGGGGCTGGGAGGATTTTTATATCACCCTCTTTTATGGAGGCCAAACTGAGGCTCTAGGAGGTAGGAGGATATCGGAGGAATGGCAGCGCCAAATCTAGAACCCAGGTCTCCCTCGGTAGGCAGGAAGAGGGGAGCGCAGGCTTTGACACGTGAAAGCAGAACCCCTGGGTACTATGGACATGTAGTCTGGGGCTCTGGGACTGGACCCTCACAGAGCCAGGATTGTGCTGACAGCCTCGGAGCAACACTGGGTGGGTGGGTAGGGTTCGCAGCGGAAGAGCAAAGCAGGGTGCAGTTATATTGGGATTCCAGGAAACCACATGGCAGAGTTTGGGAGTTTCTGCACATCCACGGTGTCAGCCAGTCGGTCCCACCAATTCCCAAAACGGGGGAACAGCGACGCAACAGACTGGACCTCCTGTGCCTTAAAGTTGCGCTACAGAGGTAAGACCGAGTTTCTAGCCCCTGCCTCCGGTCCCAGCCCTCAACCTCTC TCONS_00172126 . 5' 3 TCONS_00172126 . 5' 3 EMBV3_30026 CTGGGGCCCTGGATAGTTCAGTCATGTTTGGTGACAGGAAGAGTGTGGATATTGCAAAGA Gene BVT0102_125183 + 1 EMBV3_23866 GK000010.2:26333874-26351671 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016523 1 XLOC_008824 NonCoding TCONS_00016523 XLOC_008824 NonCoding NonCoding - 10:26346537-26347428 - TSS11482 891 3 TCONS_00016523_3 48 1 0 0 0 0 0 0 0 0 0 0 0.000720382787375522 7.70767719683937e-06 0.000200655904293549 0 0 0 0.00029642621789033 0 0 0 0 0 0 0 0 0 0 0 0 7.62787001506695e-05 0 0 noncoding 0 0 0 0 0.107704309772468 0.337233054724601 -0.0018895485071479 0.977805738687663 ACCAGAGTGGATATACATGGATTTTTTTTTTTTTTTTTTCTGAATAGAGGTATAGAGTTCCTGACACTCTGATATCTCTCCAAGAAGACTGATGATAAGCCTGAGTGTAAAGGGGATGATGTTGCCGAGGAAATCCAGTTGTAGGCAAATGAGAAGCAAGTGGATGGTGTCTTGAGCCTCGAAAAGTTTGAATATGACTGACATACCCAAGCCCTTGGGATCCTGAGCTTGTCCTCCTGGAGAAGGGACTGTGTAGTGTCAGGGTTCCTACCACTCTTTGCAATATCCACACTCTTCCTGTCACCAAACATGACTGAACTATCCAGGGCCCCAGGCTTCATGCTTGTGAGGGTGGTGTGTTCAAGGCAGGCTCCTGAGACCACATCACATCATGAAGCCACATCAGCGACTGGCTGATCCCAGGCCCAAGTGAGAAAGTGAAGGGAAGTCCATGTTTGTCCCCTTCACAGAATGCTTGGAAATTAACCCCTGAAATCCCCTTAAGTTCAGAGGCAGCCCAGGAAGGTTAGAACTACTTTACCACACCACTGGGCCCCGGGCCCCAAGGAACCTCCTTAGAGAGGCTGTGGCCAGGCCCACCCACACCCCCACACTCTCCTTTCGGGTAGGGCACTTGCCCCTCTCCCAGCTTATACAGTTTTCCTGGCTCTGCTTCAGGAGTGGGGCTCTGGATTCTGGGTCCTCTGAAGCCAACTCCATGGAGACAGAGGTCACCGTGGATGGAGGTAATTTGGGAGTTCCCGAGGAGTCAAACAGCCCAAGTGGCCCATCGAGCCTGTCACAAAGCTTTGCATTTATCAACCTTTACTGAGCAGCCCCTTCCCCGGGGGCTGTACAGTCTTCTCCTAATTTCCACCTCCTGCTGACACC TCONS_00016524 s 3' 4244 TCONS_00016524 s 3' 4244 EMBV3_37756 AGCCATGTGCTGCTCTCTTATCTGCACTTTCTCACACCTCCATTGCTCAACCCAGTGGTT Gene GeneID:783446|LOC783446:XM_002693355:285_cdna Constitutive 0 NULL GeneID:783446 15 GENE LOC783446 NULL similar to olfactory receptor MOR9-1 EMBV3_10224 ATCAGCTCAAATCCTACTTCTGGGCGTGCAAAGTCACAGCTCTCACCCACATCGTGTAGG Gene BVT0102_129819 - 0 NULL GK000005.2:114954049-114966350 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00196654 1 XLOC_118400 Coding TCONS_00196654 XLOC_118400 Coding Coding PNPLA3 5:114959864-115014122 = TSS146286 8151 1 TCONS_00196654_3 531 0.568151147098516 13 0.850010136940856 5.89876291415044e-05 3.15153418752854e-05 3.29130043297627e-05 2.59624223173378e-05 2.20213274024594e-05 1.4496162216887e-06 9.48251118053323e-05 5.15896206190356e-06 5.54760148107161e-05 0.000235938474950753 0.00019441326777349 8.9349876479414e-05 7.67343864975346e-06 3.61392880773479e-05 3.63228777626609e-05 0.00744770511677906 0.00251913245768283 0.00257607319979578 4.42586817272491e-06 1.86109887723752e-05 3.89347427037933e-06 0.00220176912508276 0.00197643567127696 0.00261654031494228 1.4581504266532e-05 3.01650521480806e-05 2.37076584200379e-05 0.000388194564081781 0.000566336010450564 0.00064585302379113 XM_002687974.3 PNPLA3 PREDICTED: Bos taurus patatin-like phospholipase domain containing 3 (PNPLA3), mRNA. 0.0 3041 100.00 0.206723101459944 XM_005261754.1 PNPLA3 PREDICTED: Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), transcript variant X1, mRNA. 0.0 686 73.55 0.133480554533186 TCONS_00196654_3 sp|Q9NST1|PLPL3_HUMAN PLPL3_HUMAN Patatin-like phospholipase domain-containing protein 3; 2e-148 439 57.81 0.704331450094162 1 coding 0 0 1 1 -0.0266304558446969 0.849327696487349 0.0012879508776763 0.980163879338 ATGGCTGGCACCAAGGTGGGCTTGGCTGAAGGCTGTGGGGACTGGAGCCAGCTAGGGTGGCAATTGGAGGTGGAGTCATCGCTTCACAAGCCAGACCCTCCTGTTGTGAACATCAGCCTGAGGGAAGTGGTCACCTCCAGCACGGACCTGTCCTCACGTTGCTGCTCCACCCTCTGCCTTGTCCCGGAGGAGCTTGCCCTGCCATGGGGCTGGCACCTGATGTTCCAGAGCAAGGCTGGGCCTGCGCTGGGCACTGGGGACAAGATGTCCCAGCTCTGGAGCCTCGCCTCCTGGATGACATTTGGGGCCCGTGGGAGCCCCTCCACGCCCGAACCTGGGAACAGCCACTTGCATTACATCGCTTCAGGCACCTGGCCCTTCGGGAGAGACATGCTGATCGACTTCAGCGGTATTCTGCTCCATCTCATTGCTGTCATCGTACTCAACAACTGCCTCCAGCATGACCAGACGTTGCAGATCCTCATGGACCTCACCCGGAGCGCCAGAAGCCAGAAATTCGGGATCGTCCACCCAGGCTTCAGTTTGAGCAAGCACATCCGAGACGGTCTCCAGAGACACCTCCCTGACAACGTCCACCAGCTTGTCTCGGGCAAGATGGTCATCTCGCTTACCAGAGTGTCGGACGGAAAAAACGTGCTGGTGTCGGATTTTCATTCCAAAGACGAAGTCGTGGACGCCTTGTGTTGTTCCTCCTACGTCCCTTTCATCTGTGGCTGGATCCCCCCTTCCTTCAGAGGCGTGCGATATGTGGATGGAGGAATAAGTGATAACATACCCTTTGTTGATACCAAAAGGACCATCACTGTGTCCCCCTTCTATGGGGAGAGCGACATCTGCCCCAAAGTCAAGTCCACGTTCTTTCTTAACGAAGGATTCACCAAGCTCAATATGCAGTTCTGCACAGAGAACCTCTACCTGATGTTCCAGTCGCTGTTCCCACCAGATGTCAAGGTGCTTGGAGAGCTATGCCTTCAAGGATATGTGGACGCGCTCAGGTTCTTGGAGAAGAATGGCATCCGTGATGGGCCCCATCCGTGCCTGAGCGCGCCCCCCGCAGAGTCGGAGCCCAGGAGCCTGGAGCCTTTTCTGGGTGTGGCCCCCAGGGAGGCGGGGCCCAAGCCAGTGGAGCTGCTGGACCACTTGCATCTCAGCATGCTGACCTGGGACGAGAGCGTCCTGGAGACCCAGTCGCCCGAGCTCAGCATGGCACTGAGGAAGGCAGTCAGAAACCCAGATGGGTACAGAAACAGGATTTGCAACTTCTTACCAGTTAAGATCATGTCCTACGTGATGCTGCCCTGTACGCTGCCCGTGGAGTCTGCCATCGCTGTGGTCCAGAGACTGGTGACGTGGCTTCCAGACATGCCCAGCGACATCCAGTGGCTGTGGTCGGCCACCTCCCACGTGTGTTCTCAAGCCATGGTGCGTCTGCTCCCCGCTTCCAGATCCCAAATCCCAGCAAGCAGCCAACGGCCTTCCTCCACAAACCCGGACACTGTGGGCGTCGCTGGGCTCTCTGCTCCTCCGAGGACCTGGACACGCACCCTGTGGATGTCCTGCAGAGGCCAGAGCTGACAACTATGATGTCCGCAGAATGACCTGTGTGCTGAGTTTGTAGTGTCCTGAAACCAAAGGCAATCTTTCTAACAAAAAGCTAGGAAGCTACTCTTGGTGTGCGCGGTGGGTGCAGAGCTCAAGCATATCCAGGATATGAGTCTCTAAATATCGTTGGCTCGGTTGGGAAACTGCACAAGGGAGCCCGGCGTGGGGGCATCTGTGGCTGACTCCTCACCCTCTCAGCTGCCCCAGGGCACGTTCCTAGGGTGACTGGTGTTTGGATCAGGGACGTTGTGGCGGGGAGCTGGGCTGCCCTTTGTGCAGTCACAGTGGTTGGGGGGAAGGACTGTGGTCCCATCTCTCCATAGAGAAAGCAGCCAGTGTCGGGGAGGTGGGGTGCCATCCTCCCAAGGACACCCCTGGTTTCAGGGGGCATTCCGAGGTGGTAACTTACGTGAACTCTGGTACATCTTTCTGCTGCTGCTACTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACTAGGCTCTTCTGTCCCTGGATTCTCCAGGCAAGAATACTGGAATGTGCCGGGGTCCAGCCCCGGCTGATCCAGGGTATTCGAAGGAGAGACAGCGTAGGCGAAGATCAGGAAACAACTGCTTAATTAAACGTTAATTAAGGATATAAGGAGTAATAGAATAAGGATAGTTCAGTAGGAAATTCAGTGAAGAAAAGAGGCTGAAATAAGGATAGCTCAGTGAGGAAATTCAGTGGAGAAAAGAGGCTGAATAATTCAGCCAGAAGGTGAGAGAAAGAACGACATGGGGAGACCAAGTTTCGGTGAACAAGGCCCGCACTTTATTTTCCAAAATAGTTTTTATACCTTAAGTTATGGATAATGGGGGAAGGGGTGGAGTCATGCAAGGACAGCAGCTCCTGGTCCTAAATGAAGCCAGGCTTTCTTCCTGCAAACTTATCATATGCAAAAGCTTAGGTGATTTGCATCATCTTCTGGCCCGGAGGCCTGTTAACATTTTAAGACCCTTTCTTCAAAAACTTATTTTTCTCTAAAGGTGATTGGTCAGGAGCCACCCTCCAAAAGCATTAGATAAAGTTGCATTCCTACAGAGCAAAGGTGTGGTGGGCTATAACAAGAAAAAGAATTAACTCAAGGGTCCCAGGTTACAAACATTAAAGCTACTACTTACACCAATTATATTAATCAATACACTGCCAGGGTCACAGGAGGTAAGGGATATGGAAACTTAGCAGCAAACATTGGCCCAACAAGTGAAAATCCCTTCACCAATACAATTTCTAATCAATCTTGTAACTACTCAAAAGAATCTGTGTTTAGACAGTTTAGAACATCTCCTGCCTCTCACAGTTGGGAGGCTTTGAACAATCACATGTGGCCAGAAAAACCTATTCAGGCAGGCTAGAGGATTTCCAAAGGAGTTTGTAGCTTAAACACTGTCACACCCAGGAATTATTAACTGGAGCTGCAAGCCAACTCCTCTCCCAGAGAGGTAGTGGGGGACAGCCCCCCGCAAAGTCAGAGGTGCAGGTGAAGGCACAAAGCAGAAAGTAGGCAGACTCTGGTTTTGGGGGTAGATGGGGGACTCCTGAGGCTCAATCCCGCCTTTGCGTATGCCGAGCCTCCTTCCTCATGACCTTTGTCATGGGCGGAGTTCCTCACGCTGGCTCCTGGCAGTGATAGAATTCCAGTTGAGCTATTCCAGATCCTGAAAGATGATGCTGTGGAAAGTGCTGCACTCAATATGCAATATGCCGGCTCCCGGCAGGAGTGGGTTGCCATTTCCTTCTCCAGTGCATGAAAGTGAAAAGTGAATCAGTCGTGCCCGACTCTTAGCGACCTCATGGACTGCAGCCTACCAGGATCCTCTGTCCATGGGATTTTCCAGGCAATAGTACTTACCTATCCTAAATATTTGGTGGAGTTATATTAAACATAACTCTCAGCAGGCACTGAGAGAGAGCATCAGAGGGCAGACAGATGGAAACCACAATCACAGACAACAGGCCAATCTGATCAAACGGACCACCCAAGACGGACGGGTCATGGTGGAGAGGTCTGACGGAATGTGGACGACTGGAGAAGGGAATGGCAAACCACTTCAGTATTCTTGCCTTGAGAACCCTTGAACAGCATGAAAAGCCAAAAAGATAGGACACTGAAAGATGAACCCCCCAGGTTGGTAGGTCGCTGATATGCTACTGGAGATCAGTGGAGAAATAACTCCAGAAAGAAATGAAGTGATGGGGCCAAAGCAAAAACACCACCCAGTTGTGGATGGGACTGGTGACAGAAGCAAGGTCCGATGCTGGAAAGAGCAATATTGCATAGGAACCTGGAATGTTAGGTCCATGAATCAAGGCAAATTGGAAGTGGTCAAACAGGAGATGACAAGAGTGAATGTCGACATTCTAGGAATCAGCGAACTGAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTACTACTGCGGGCAGGAATCCCTCAGAAGAAATGGAGTAGCCATCATGGTCAACAAAAGAGTCTGAAATGCAGTACTTGGATGCAATCTCAAAAACGACAGAATGATCTCTGTTCGTTTCCAAGGCAAACCATTCAATAGCTTGGTAATCCAAGCCTATGTCCCAACCAGTAACAGTGAAGAAGCTGAAGTCGAACAATTCTATGAAGACCTACAAGACCTTCTAGAACTAACACCCCAAAATGATGTCCTTTTCATTATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAAACACCTGGAGTAACAGGCAAATTTGGCCTTGGAGTACAGAATGAAGCAGGCCAAAAGCTAATAGAGTTCTGCTAAGAGAACACACTGGTCATAGCAAACACTCTCTTCCAACAACACAAGAGAAGATTCTACACATAGACATCACCAGATGGTCAACACTGAAATCAGATTGATTCTATTCTTTGAAGCCAAAGATGGAGAAGGTATATACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGGCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTGAAATTCAAGAAAGTGGAGAAAACCATTCAGATATGACCTAAATCAAATCCCTTATGACTATACAGTGGAAGTGAGAAATAGATTTAAGGGACTAGATGTGATAGAGTGCCTGATGAACTATGGACGCAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATACAAAAAAGCAAAATGGCTGTCTGAGGAGGCCTTACAAATAGCTGTGAAAAGAACTGAAGTGAAAAGCAGAGGAGAAAAGGAAAGATATAAGCATCTGAATGCAGAGTTCCAAAGAATAGCACAGAGAGATAAGAAAACCTTCCTCAGAGATCATGCAAAGAAATAGAGGAAAACGATAGAATGGGAAAGACGAGATCTCTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGGCAAAGATGGGCTCAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAACTGTACAAAAATCTTCATGACCCAGATAATCACGATGGTGTGATCACTGACCTATAGCCAGACATCCTGGAATGTGAAGTTAAGTGGGCCTTAGAAAGCATCACTACGAACAAAGCTAGTGGAGGTGATAGAATTCCAGTTGAGCTATTCCAAATCCTGAAAGATGATGCTGTGAAAGTGCTGCACCCAATATGCCAGCAAATTTGGAACACTCAGCAGTGGCCACAGGACTGGAAAGGTTCAGTTTTCACTCCAATCCCAAAGAAGAGCAATGCAAAGAATGCTCAAGCAAACCACACAGTTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGCTTCAGCAATATGTGAACCATGAACTTCCTGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAATATTCACTGGATCATGGAAAAAGCAAGAGAATTCCAGAAAAACATCTATTTCTGCTTTCTTGACTACGCCAAAGCCATTGACTGTGTGGATCACAATCAACTGTGGAAAATTCTGGAAGAGATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATCCGTATGCAGTTCAGGAAGCAATAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATATTGTCACCCTACTTATTTAACTTATATGCAGAATACATCATGAAAAACGCTGGGCTGGAGGAAGCACAAGGTGGAATCAAGATTGCCAGGAGAAATATCAATAACTTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGGAAAAGTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCATGGCATCCGGTCCCATCACTTCATTGCAAATACATGGGGAAATAGTGACTGACTTTATTCTTCTGGGCTTCAAAATCACTGCAGAATGGTGACTGCAGCCACCATCTGAAATTAAAAGATGAAATTCAAAGGTGCATACTCCTCGGAAGGAAAGTTATAACCAACCTAGACAGGATATTATAAAGCACAGAGACATTACTTTGCCAACAGAGGTTCATCTAGTCAAGACTATGGTTTTTCCAGTGGTCATGTGTGGATGTGAGAGTTAGAATATAAAGAATGCTGAGCACAGAAGAATTGATGCTTTTGAACTGTCCTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGACATCTATCCAGTCCATCCTAAAGGAGATCAGTCCTGAATTTTCATTGTAAGGACTAATGTTGAAGCTGAAACTCCCAATACTTTGGCCACCTGATGTGAAGAGTTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAAAAGTGGATGACAGAGGATGAGATGGTTGGATGGCATCACTGACTCAATGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTAATTGACAGAGGCCTACATGCTACAGTTCATGGGGTCGCAAAGAGTCGGACACGACTGAGCGACTGAACTGAACTGAACTTATATTAAACAAAGGATTCTTAAAATCTCTTGAATTATCTATTATGAGGATCAAGAAAACATTCAGAGAATAAGTCTTGAAAATAGAAATCCAGTGCATAAGACAGTCACCCTGGCACCTGCCCCCGCACCCCTCCCCCGCGAGCTCTAATGGAGACGAGCAGGAGGCAGGCACGCACCGTCTCTCCAGGGTGGTAATCTGTTGGCAGGCACAGATTACATGGGCCCACTGCCCGTGTAATATGACCCAAGGAGCAATGTGGCGTGCGTTTTGCTTATTTATGCATTTGAGGATACCAAAAAGGAAAGGAACAATCAGCTCAAATCCTACTTCTGGGCGTGCAAAGTCACAGCTCTCACCCACATCGTGTAGGTGTCCTGGAGCCGAAGAACCAGCAGGGCCAGACAGAGCACCGCACCGTGAGGGCAGCAGGCAGGGACTGCCTGTGAAAACACAGGGTCGGCTCGCAGTGCAGGGAAGTGCCCCATGGGGGCTCCTGGCTGGCTCCTCACATTTCTGGGGTCTCCTGTGCTGGTAACCCTCACTTCCCGAGTGAGGCAAGGCTGAGTGGTGGGCTCTCTGGCCACCTGGGCCCCAGGTCAAAGCACTGTCCCCTTGCTGAGCTGACCTGGACTCCTGGTGACACCCTCACACCTTCCCTGAGCCCGGTGCTCGGGGTCCCAGTGGCCTTCTCTGCCAGAACCATCGCCCGGGTCTTAACACATGCAACCCCACCTTAGCAGCATCTTACAGTAACCAAGACACTTTCATTTATATAGTATTCTCTGCACTGGTTCTGACGTCATCGTAGGGAAAAAGATGTGTTAAGATAGGATTACATGGGACTTATTTTCTTACTGTCTGTGATTATTCCATCTTCTTACGATCAGCATGTGTTTTATTAATTCGTTTCAAACGTGCAGTAACACGAGGAAGTGTATTACTGTTTCTTAGGAATATCCCGGGTTCCGCCTCACTGGTGCCTTGTCTCCTCATTGGCTGACCCAGGCCTCCCCCCGACATCCTCACCGCCCCCCAGGCCCTCACCTCTCCAGCACTGCGGGTTTCTCATCAGCGTGTAAAACATTCTCAAGTTTCTCCCACCTTGTCAAATATTGATGATCCGCTCGGTATGCGGGGATGCTCCAGTATCAGGAATCATTGGTGTGCAGTGTGATTCATGCCAGGGAGCAACCGTCTGTTTGGTAAACAGATAGCAGAGCCTGCTGAGAAGCATGAGCCCAGTCTTGCTAAGGAAATAAAATGTGTGTGTAGAGTGGACACTGAAAGACTGTTTGCCCGGTTACCGACGGTGGTTACCATGATGCCGTCCCCTGTAATTACATTTTATATTAAATTTCTGCGTTCATCACGATATAATTCATAACAA EMBV3_41411 GAAGAAGCTGAAATACAAAAGCAGAGGATTGAACAGCTGCAGAGAGAAAGGCGGCGGGTC Gene GeneID:537304|OSBPL3:XM_002686866:85_cdna Constitutive 0 NULL GeneID:537304 4 GENE OSBPL3 NULL oxysterol binding protein-like 3 EMBV3_23603 AGGTGAGAATGGGTCACCTGTTGAGGAGTGTGCTGAGTGTTTGTAGAAGGGGTAGAGAGC Gene BVV0102_187973 + 0 NULL GK000023.2:8271773-8297772 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24696 GGAGAAACTGGCAGCCTTCTGCAATGGTGATGGGTGTGTAAAATGGTGCAGCTACTATGG Gene BVV0102_322212 + 0 NULL GK000030.2:23331285-23387290 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00249755 1 XLOC_152698 NonCoding TCONS_00249755 XLOC_152698 NonCoding NonCoding - X:23384063-23384751 - TSS186976 688 2 TCONS_00249755_2 41 0.995639534883721 1 0 0 0 0 0 0 0 0 0 0 0.000173430551539882 3.32730274439017e-06 5.19721604093362e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005202873.1 CXCR2 PREDICTED: Bos taurus chemokine (C-X-C motif) receptor 2 (CXCR2), 2e-38 163 72.92 0.417151162790698 NR_026876.1 STL Homo sapiens six-twelve leukemia (STL), non-coding RNA. 3e-62 242 70.93 0.783430232558139 0 noncoding ACATAGCCTTTTCAACAAATGGCACTGGGAAAACTGGATATCCACATGCATAAGAATGAAGTTGGACCTTTAGCTTACACCAAATACAAAAGTCAATTCAAAATGGATTAAAGATCTAAATGTAAGCCCTAAAACAAACAAACAAACAAAAAATCCTAGAAGAAAACATAGGGGAGAAGCTTCATGACTTTGGATTTGGCAATGATTTCTTGGAGATGACACTAAAAAAGCATAGGCAACAAATGCAAAAACAGACAAACAGGACTTCATCAAATTAAAAAACTTCTATGCATCAAAGGAAACAATCAAAAATATAAAAAGGGAAACAAACTATTGAGTGGAAGAAAATATACAGAAAGCATATATCTGGTAAAGGGTTAAGATCTAAGATATAAAGAACTCCTACAACTGGACAACAAAAAAGTACCTGATAAAAAATATGCAAACCACATGAATAGACATTTCTCCAAAGATGATATACAAATGGCCAAAAGTATGAAAAGATGCTCAATGTCACTAATCATCAGAGAAATGCAAACCTAAACCATATAAACACCCATCGGGATGGCTTCTTCCAAACATCACCCTCTACAAAGGGGTGGGGGGAGTGTTGGTGAGGATGTGGAGAAACTGGCAGCCTTCTGCAATGGTGATGGGTATGTAAAATGGTGCAGCTACTATGGAAAAC TCONS_00246594 . 3' 2540 TCONS_00246594 . 3' 3227 EMBV3_04706 AGGGAGCTGGGCGTGTTCTGGACGGGCAGCGGCTTTGCGGTGAATACCAGTTTGCTATGA Gene GeneID:504285|SPPL2B:XM_002688954:90_cdna Constitutive 0 NULL GeneID:504285 7 GENE SPPL2B NULL signal peptide peptidase-like 2B EMBV3_22795 TCCCAGCTTGTCCAACTCTATGACTCTTGGTAGCCTTTCCAGCTAATTGCGGTCAGGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38295 AGACTCTATGTGAAGGAAAGCTAGCCCCTAGAGAAGACAGCTCACTGGAAGAGTCCTGTG Gene GeneID:100138814|LOC100138814:XM_002688980:15_cdna Constitutive 0 NULL GeneID:100138814 7 GENE LOC100138814 NULL hypothetical protein LOC100138814 EMBV3_25104 TGCTAACATGCCGTGGGTGGCTGCCGTCGCACCTCGGTTGAGACATCATTATGGTAAAAA Gene GeneID:616058|SNAPC5:NM_001046573:272_cdna UTR3_Alt 1 NULL GeneID:616058 10 GENE SNAPC5 MGC138130 small nuclear RNA activating complex, polypeptide 5, 19kDa EMBV3_21218 AACAAATGTCTTAGCACAAGCACTAGGAGAAGCCTGACTTGGGAAGACTCTCTGACTTCC Gene GeneID:540371|MARCH6:XM_002696434:58_cdna UTR3_Alt 2 NULL GeneID:540371 20 GENE MARCH6 NULL membrane-associated ring finger (C3HC4) 6 EMBV3_24825 AGAAGCTTTTCTTGCTGGCGTGCGACAAGGAAACTAATGGAGAGAATTCAGAATCCTGAG Variant GeneID:282100|TRPC1:NM_174476:12_cdna 183^439 3 EMBV3_02057 GeneID:282100 1 GENE TRPC1 NULL transient receptor potential cation channel, subfamily C, member 1 EMBV3_06586 TCATATGTATTTGGGTGTTTCCCCTGCTACCCCGCCCTGTTACTATTTTAAGGCCTCATG Gene GeneID:613948|SLC25A40:NM_001076299:38_cdna Constitutive 1 NULL GeneID:613948 4 GENE SLC25A40 MGC142474 solute carrier family 25, member 40 EMBV3_29160 CTGGGCCAGCTTCCAGGAACAGAGCGGAGTCTTGCAGGAGTTGCAGGGGAAGGTGATGGA Gene GeneID:100337340|LOC100337340:XM_002694644:145_cdna Constitutive 0 NULL GeneID:100337340 17 GENE LOC100337340 NULL transmembrane protein 191C-like EMBV3_12330 GAGGACAACAGTGTGGTATCCTTGTCCCAGTATCCAGCCATGCCCTGATGTGAAGTACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18590 ATGTTGCCTACGGAAAAGGGGCGTCGTTCTCGTTACATAACTGCTTCCGAGCTGACAAGG Gene BVV0101_066948 - 1 EMBV3_05815 GK000025.2:257903-282553 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00250681 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00238581 TCONS_00253739 TCONS_00129710 TCONS_00210913 TCONS_00174805 TCONS_00010280 TCONS_00188145 TCONS_00161822 TCONS_00125692 TCONS_00250203 TCONS_00031886 TCONS_00241019 TCONS_00110425 TCONS_00246739 TCONS_00174808 TCONS_00174809 TCONS_00211020 TCONS_00000529 TCONS_00238380 TCONS_00251851 TCONS_00174807 22 XLOC_151107 XLOC_153624 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_145248 XLOC_156678 XLOC_078423 XLOC_129423 XLOC_104695 XLOC_005831 XLOC_114188 XLOC_098707 XLOC_077234 XLOC_153146 XLOC_018131 XLOC_147683 XLOC_066329 XLOC_129530 XLOC_000141 XLOC_145047 XLOC_154792 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_25127 TCCAGCATGGGTTCTCCCGTCAATGCGCAGTTGTCCCCAGAAGAAGAAGAGAAAAGGCGA Variant GeneID:280795|FOS:NM_182786:2_cdna 287^538 1 EMBV3_10893 GeneID:280795 10 GENE FOS MGC139881 FBJ murine osteosarcoma viral oncogene homolog EMBV3_19045 ACCCTGTCCATCATCGTCACCGTGTTTGTCATCAACGTCCACCACAGATCTTCCTCAACC Gene GeneID:521702|CHRNB3:XM_002698727:178_cdna Constitutive 0 NULL GeneID:521702 27 GENE CHRNB3 NULL cholinergic receptor, nicotinic, beta 3 EMBV3_15901 GTGGCACTGGCCAAGGGAGAAGTGACCGAAATGTTCAGTTATGAGGAGTCAAATCCTAAG Gene GeneID:512534|HM13:NM_001046124:1009_cdna Constitutive 1 NULL GeneID:512534 13 GENE HM13 MGC134054 histocompatibility (minor) 13 EMBV3_20963 TCGATGGTGCAGCCCCCCAGGCCTTTCTTTGCAAGTGGTAAGTCAACCCTGTTCAGAGGT Gene BVV0102_146412 + 0 NULL GK000011.2:48713879-48716925 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26277 CGTTGCTCTTATCCTAGGACTTCGGGTAGGCTAAATTAGTACGACCTACGCGCTTGAACG Gene BVT0102_446137 + 0 NULL GK000020.2:27755505-27970159 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114880 TCONS_00114881 1 XLOC_069383 NonCoding TCONS_00114880 XLOC_069383 NonCoding NonCoding - 20:27762582-27763426 - TSS85570 397 2 0.531435349940688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00106444547562114 0 0 0 0 0 0 0 0 8.5006082003314e-10 0 4.42734798624688e-05 8.19059661471934e-10 0 0 XR_229112.1 LOC101903435 PREDICTED: Bos taurus uncharacterized LOC101903435 (LOC101903435), 1e-14 84.2 100.00 0.113350125944584 NR_046243.1 LOC642366 Homo sapiens uncharacterized LOC642366 (LOC642366), non-coding RNA. 4e-39 165 72.22 0.886649874055416 0 noncoding 0 0 0 0 -0.0132505451291017 0.911324953162669 0.00361765368196754 0.940375892398669 GGCCAGGAAATCTACCCAGGAAGCCTCAAATAACCTTCTCTCAGGTTGAAAGGAGAATTTGCTTCGCTCCTCTACCTGCTAAATTCCAACTGAGAAAGGGGCTCAGGAGACGACCCCTTTTAGGAAGAAGGTCATTTGATCAACTCAACCGAGTTAATAACTGGTCTCCCGGAAGGGGTCAAGAACGCCTTCTCTTCCCACCGGCGCAGCGCGAGGCGCCGGGTCGACCACTCCTACCACAGGTAGCCTCTCACCGAGGCCCAGGAAATCCTGCCTGACTCTCCTTTGAAGAGCTTTGCGATCAAGTTTCTGGAATTTCCTAGAACCCCACTCGCCTACGTTCAAGCGCGTAGGTCGTACTAATTTAGCCTACCCGAAGTCCTAGGATAAGAGCAAC TCONS_00114878 TCONS_00114879 s 5' 7079 TCONS_00114878 TCONS_00114879 s 5' 7431 EMBV3_15349 GAGAGACTGTAGTAATGCGACCACAAGCCAAAGAATGCCAGCAGATGGAAGAAGCAGAAA Gene BVT0102_264197 + 0 NULL GK000012.2:56695188-57534532 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14316 GTCCCAATTTCTCAGAAGCCCTTGTTTATTCCAAATGCCATCCAGATGTGTGCAATGTGG Gene GeneID:523526|COL4A6:XM_002699886:131_cdna Constitutive 0 NULL GeneID:523526 X GENE COL4A6 NULL collagen, type IV, alpha 6 EMBV3_22792 GGAAAATCCTTTGATGGGTTGGGCGTCAACGATGGAGCTATGATGTTGAGGAGAGAAAGG Variant GeneID:327680|NDUFS4:NM_175800:55_cdna 370^443 1 EMBV3_43697 GeneID:327680 20 GENE NDUFS4 NULL NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) EMBV3_37507 CAGGCTGTGGTACTAAGGACAGGGTCAGCAGATCTACCCACTTTCATATCCCCAGTGTGG Gene GeneID:510156|CYP4V2:NM_001034373:31_cdna UTR3_Alt 2 NULL GeneID:510156 27 GENE CYP4V2 MGC127339 cytochrome P450, family 4, subfamily V, polypeptide 2 EMBV3_22404 TCAGGGTTTCCGAGCTGAAGCAGGTATCCTGAATTACTACCGATTAGACTCCACACTGGG Gene GeneID:538733|ALKBH1:NM_001102220:120_cdna UTR3_Alt 2 NULL GeneID:538733 10 GENE ALKBH1 MGC165976 alkB, alkylation repair homolog 1 (E. coli) EMBV3_39978 GGCTTAGAAAATGACAATTTAGGACTTATAAAGTCATCTGTTGGTACAAGTTGCAAGTTC Gene BVT0101_025948 - 0 NULL GK000028.2:8942504-8951739 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160088 TCONS_00160093 TCONS_00160090 TCONS_00160092 1 XLOC_097585 Coding TCONS_00160090 XLOC_097585 Coding Coding ERO1LB 28:8949262-9026599 = TSS119823 4589 1 TCONS_00160090_2 467 16 0.940868418330402 1.79319301715628e-05 1.00883388179942e-06 2.01521289428546e-13 6.35095945582639e-11 2.35427302795745e-23 4.9112894772471e-09 1.35973913479582e-11 6.99646397239022e-10 3.70451097985326e-10 1.77501346056255e-10 1.11434057128238e-10 1.18596540579921e-10 3.12500958289209e-22 6.81449104646582e-10 1.26842862739832e-08 0.00257999342195133 0.00317688402952552 0.00108653176115821 5.86825241985076e-06 1.56270840180564e-05 2.7283575066809e-26 6.62976756064867e-09 0.000846066032855918 9.52146276393565e-07 3.59392906567066e-10 7.05307426195763e-08 2.98073908780715e-10 4.93382466369535e-10 5.26169926413053e-05 9.01089189873731e-10 NM_001206730.1 ERO1LB Bos taurus ERO1-like beta (S. cerevisiae) (ERO1LB), mRNA. 0.0 3360 100.00 0.40575288733929 NM_019891.3 ERO1LB Homo sapiens ERO1-like beta (S. cerevisiae) (ERO1LB), mRNA. 0.0 4461 81.22 0.995859664414905 TCONS_00160090_2 sp|Q8R2E9|ERO1B_MOUSE ERO1B_MOUSE ERO1-like protein beta; 0.0 930 94.86 0.997858672376874 1 coding 0 0 0 0 -0.259168403487899 0.350341050558838 0.0190484358575678 0.729851220368117 GTGGCCGGGCGCAGGGGAAGCCGGGGGCGGGGCCGCCTAGGGGATGAAGTGGGGGCGCTCGACTCGTCAACCTCACTCACAGCTGCCGGGCGGCTGGGAGAGCGTCCTCCGCCACTGGACTGGCGTGCAGACCTCTGACCCTGGAGTCTCTCGGCCGCCGGGAACCGTCCTCTTGGGTCGTCGCCCGGGCTGCCCGCCGTTTCCCGGCCCCGAGGGGCCCGGCCGGCCGCGGCGGGGGGAGAGGTCAGCATGAGCCCGGGGGTCCGGCGGGCCGGCTCAGGGCAGGGGGCGGCGGCCGCGGTGCAGCTTCTCGTCACCCTGAGCTTCCTCCCGAGCGTCGTCGAGGCCCAGGTCACCGGAGTCTTGGATGACTGCTTGTGTGACATAGATAGCATCGATAACTTCAACACCTTCAAAATCTTCCCCAAAATAAAAAAGCTGCAAGAACGAGACTATTTTCGTTATTACAAGGTTAACCTGAAGCGACCGTGTCCTTTCTGGGCAGAAGATGGCCATTGTTCAATAAAAGACTGTCATGTGGAGCCTTGTCCAGAGAGTAAAATTCCAGTTGGAATTAAAGCTGGGAATTCTAATAAGTACTCGAAAGTGGCAAATAATACCAAAGAATTAGAAGACTGTGAGCAAGCTAGTAAACTGGGAGCAATTAACAGCACATTAAGTAATCAAAGCAAAGAAGCTTTCATTGACTGGGCAAGATATGATGATTCACAGGATCACTTTTGTGAACTTGATGATGAGAGATCTCCAGCTGCTCAGTATGTAGACCTGCTGTTGAATCCCGAGCGTTACACCGGCTATAAAGGGTCCTCTGCGTGGAGAGTGTGGAACAGCATCTATGAAGAGAACTGTTTCAAGCCTCGATCTGTTTATCGTCCTTTAAATCCTCTGGCACCCAGCCGAGGAGAAGATGATGGAGAATCATTCTACACATGGCTAGAAGGTTTGTGTCTGGAGAAACGAGTCTTCTATAAGCTTATATCAGGACTTCATGCTAGTATTAATTTACATCTGTGTGCAAATTATCTCTTGGAAGAAACCTGGGGTAAACCTAGCTGGGGACCTAACATGAAAGAATTTAAACGCCGATTCGACCCTGTGGAGACCAAGGGAGAAGGCCCAAGAAGGCTAAAGAATCTGTACTTCCTATATTTAATTGAGCTTCGAGCTTTATCAAAAGTGGCCCCATACTTTGAGCGCTCAATTGTCGACCTTTACACTGGAAATGTGCAAGAAGATGCTGACACAAAAACCCTTCTACTGAATATCTTTCAAGATACAAAGTCCTTTCCCATGCACTTTGATGAGAAATCCATGTTTGCAGGTGACAAAAAGGGGGCCAAGTCATTAAAGGAGGAATTCCGGTTACATTTCAAGAATATCTCCCGTATAATGGACTGCGTGGGATGTGACAAATGCAGATTATGGGGGAAGTTACAGACTCAGGGTTTAGGAACTGCCCTGAAGATATTATTCTCTGAAAAAGAAATCCAAAAGCTTCCAGAGAACAGCCCATCTAAAGGCTTCCAACTCACTCGACAGGAAATAGTTGCTCTTTTAAATGCTTTTGGAAGGCTTTCTACAAGTATAAGAGAGTTACAGAATTTCAAAGTTTTATTACAACACAGTAGGTAATAGAGGCTTTTATATGTCTAATTAGAGACATAAAGTGACTGTGTGAAGCCTTTTTAGTCTTGGACATTTCAGCAAAAGGAGACTAATCAGACTTCAAGAATTCTGAGCTCTTAAAGAGAAAATTCAAATGTTCACTTGAATATTTATGCTTCTTAATAGATTATCAACTAGAGATATTTATAAATGAAGTATATACTTTTAAAACATGTAAGTTATACTAATTCTGTGTTTAATTCCATGTGTTACCATCTGTTGAATATATTCTGAACAGCAATTCACGAAGAATTGGCTTTGTGTTTATTCTGTTCTTTATTTCCAGTAGTCAAACTTAAAAATGTCTATGTCTCCATCCGAGTAACACTGTTAACAGTCTGTTATGGAAAAGGAGAGCTAGAGAGCAAATGATGCTTAGGGCCAGTATCAGTAACAAAAATTTGTCAATGATTTTTAAATGTTATTTAGCCTTGCCTAGCTCTGTGTGTCACCATCTATCATAGGGAAGTGTCTGCGTGACGAATGACCCTTTCAATGTATAATGACAGTAGTTACCTAAGAATCCCCAAGGCTTCAATTTGTTTTAAGATTTTTACTTGCTGTTGTTGTTGCTGTTCTGTTTTGGTCTAAAGGCGAATAAATACCTTCAGCAAAGGTGAATCAGTACTGTCCCCTGTGCTACCCATCCAGATCTCCTGTGCCTGCAGTGGGCTGGCTCAAGGGGATTCTTTACTGAGAACCTAGAAAACAGTTTCTGTTGGTTTTGTGTCTCTTTGCCCCTACTCCAACTTTAGGAATTTTTGTTAAGAAAACAAAAATGGCATAAATACTTAACAGTTTCCATATTGATAAAATTTGAATGGGATTATATGGATTTATAACACCAGTTGGAGACATTATATACACAAAACTTACTATTTTAAAGTAAGCATTTTTAAAGGATTTTATTTTTGACTATAGTCTATGCAATCCTCTCTCAACTTGATTTTCTTTTGTATTTAAATAGTTAGTTCATACTTCTGTAAGCTTCCTTTTTCCCTACCTTTTCTTTTTTAGTTCTTTGTATATAAATGAACTTGCAACTTGTACCAACAGATGACTTTATAAGTCCTAAATTGTCATTTTCTAAGCCTTGGATTTAAATATCTTTAATATTTAAAATATTGATTATTGTTAAAGGTGTTAGTGTATATATAATGTGATTAATTTGGAAGGTTGCAACTGTGTAGAAGTAATGCGGGTATCAGTCTTTTATGAAGTAAATAAGTGCTCTTAAATCCACATCTTATCCTGCCAAAGTCTGAAATGTCTTCATTGGTGGTTTAGTGGCATACTTGTGCTTAGTTGGTTCATCCCCCCTTTAAACATATGTAGCTATCCCTTGGAGGGATATGGTTGGGGGGGAGTAAGAGCTCACTAGTTACTTTCTTACCCAATTTCTAACCCTTGTAGACCTGGAGTTTTCATGTTGTTGATGGTGGTGGTGGTATATTTTTGTTGAATAAAACAGACTGATTTGGTTGGAGCCTCCTCCACTTTTTCTTTTCATTTTTAGGGATACAAGTACTGTCTGGTGGGAAAGGGGGACCTTAAGGTAAATTTGTCTAAAAAGTTGAATATCTAGGTAATCTTGCTAGTAAATTAATAAGAATTATTCTTAGTGTTTTTCAAAGTCTAAGAAAATGTGAATGTTTTGCACTTTGTCTATTATTACTGTAAGTTTAAAAATCTTTTTGGTAGTGTTACTTCACCATTCTCCCAGTTAAAGATAAAAGCTGTTGTTTAAGTTCTATTTCCTGGAAAAAATCTTTGGTCATTTCCATTTGTTTTCTTTACTGTGATTTGTTTCAAGCTTAGTTAAAATGGTGTCTTAGAGTGAGTTCTAGGACTTAAAAAGTCTAGTTAGGGTAAAAAATTCTTTTAAAGGTTTTAACAGATCTTTCACTATCAAGAAAATAAACAAATGAAGTAGTCTTAAGCTGAAATCTATTTGATTAACTTTACCATAAACGAGATTGTGGGGGGGAACCTACATTTTTGTGTATGTGTGTATTTCTTAAATGAATGTGATAGAAATCTGTTTTGTGAGCCTGGTGATGTTTTATGATCCCTGTGATATAAACTTTTTTCCAACTCCTACTTTTTATTGTGAAGTGATATTACAGTACCGACTGCATTGTGACAATGCTTGGATGGCAATACCTCTTGGCATTTTGTCTTTATCTCATCACCTAATTTAAAAATCCAGCACTTGATAATATAACTTGACAGAAATGATTGTACCAGCTGACAAAGTAATGAAAATGAAGAGAAGGAACATATTCCTTCCTTTAGTAGCGTGAGTTTTTTTTTTTCCCCCTTAAGTGACATCTGTGTAAATTAGAAATTCTCTGTATTAAAACTGATAAACTTAAATGTTTCTCTTGTGTTGATTCTTAGATTACAAGGAGGATGAGACAGACTATTAGAATGGTTTTTTACCGTTTTGAAATTTGATAAGTCAAGTGTTTTATTTTGACACTTTAACGTTGTGAGTTGTTCAACACTTGTAATCTCTGTATGTCTGTGAAACACTGTGCCATATTCTCCAACTTTACCTAGGTGCCACTGTATATAAGCAAGGACAGCTATTTTGATCTCCATCAGCATTGCCTTCACCTGGAAATTTGGGAACAGTTCACAGTAAGCCTCCCAGCAGTTTTGCAAACTGAAGTACCTGCAGAAACCATAGCTATTCACCAAAATACACAGACTGGGTGCATGGTATCATGGAAATTATTTGGGAAAACAAAAACAACACAGACACATACCAGGTTTATGTGTATTCGATTTGAAGTAACATCTACAGGTGCAGCTTTGATTTTGAACAGAATTCCAAATGATTTGCTGTTGTACCCACAAGATTACAGAAAATGTGAATTAAAGTAAATGTTTCTGCAATC EMBV3_12784 CATGCAAGCGTACGGCCGACAGCCAACCTGGTGCTACTCAAAGTACATAGAAGCCTTAGA Gene GeneID:617133|RGS22:XM_002692801:105_cdna Constitutive 0 NULL GeneID:617133 14 GENE RGS22 NULL regulator of G-protein signaling 22 EMBV3_17622 AGCACGGGCATCTGGCATTATTCAATATCTCACCCTTGATAAAACATCTTCCCCATCAGG Gene BVV0102_196515 + 0 NULL GK000005.2:94252873-94316292 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00201028 1 XLOC_122678 NonCoding TCONS_00201028 XLOC_122678 NonCoding NonCoding - 5:94308248-94308676 - TSS150596 428 2 TCONS_00201028_2 63 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.17093146736395e-05 0.00120250241431006 0 0 0 0 0 0.00034295490130992 0 0 0 0 0 0 9.83311472201895e-05 0 noncoding 0 0 0 0 -0.0344031573496366 0.822880868533594 -0.0118339649099347 0.804761169361421 AGGGTACAAAGCATGTTTATACTCAAACAATGATTAGATCTGTATTATCAAAGTAGTATATTTTTACATGTGTGATTTTTCACTTTTTTTTGTAGTGCCATCATGGTACCAGAGAACTAGAACTTTACAAAGGGCTTCTACATGCCTGACACTTTCCAAGTTCAGTTTTATTTATTATTTTCCTGCACATCCTGATGGGGAAGATGTTTTATCAAGGGTGAGATATTGAATAATGCCAGATGCCCGTGCTACAGTTTCAATCCATATTTCTCAGCACTTTCAGTTTTAGAGTTGCTGTTTCTACTAGTGATTGCAAGGTCCATCAGAATTTATATTCATCCAAACACAATGAACAACTCATTCTATTCAAATGTAATATTCATACAAATTCCAAATCCTTGACCTCAAAGGCAGCAGATCAAAGAAAG TCONS_00195927 TCONS_00195928 TCONS_00195929 TCONS_00195930 TCONS_00195931 TCONS_00195932 . 3' 4778 TCONS_00195927 TCONS_00195928 TCONS_00195929 TCONS_00195930 TCONS_00195931 TCONS_00195932 . 3' 5205 EMBV3_17521 TACCTGATGATCAAGGCTTTTCTTCCTAAGGCGTTGTGAACAGGTGCGTGTACAGCACAA Variant GeneID:515321|BDH2:NM_001034488:44_cdna 617^677 2 EMBV3_20782 GeneID:515321 6 GENE BDH2 DHRS6 MGC127950 3-hydroxybutyrate dehydrogenase, type 2 EMBV3_18102 AAGCACAGATGCCCACAGACACAGTTCAAAGCTCTCATGGCTAGATGCTGAGATGCTGAG Gene BVT0102_043443 + 1 EMBV3_22707 GK000023.2:40790974-41076274 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135203 1 XLOC_081658 NonCoding TCONS_00135203 XLOC_081658 NonCoding NonCoding - 23:40860718-40864936 - TSS100637 965 1 TCONS_00135203_1 73 0.212435233160622 2 0.771638605643823 5.63966305607808e-05 3.12385676774752e-05 0.000249328580507617 1.63510699748224e-11 0 3.70679563935012e-06 0 0 3.2705223187113e-05 0 0 0 0 0 0 0.000136847864005288 0 0 1.92851547321713e-05 0 0 0 0 0 0.000158131232951242 7.30099835520511e-05 0 0 0 0 XR_238277.1 VPS4A PREDICTED: Bos taurus vacuolar protein sorting 4 homolog A (S. cerevisiae) (VPS4A), transcript variant X6, misc_RNA. 2e-23 114 77.55 0.144041450777202 0 noncoding 0 0 0 0 -0.0818356716663723 0.561880872502934 0.0205062682125417 0.663424373409057 GCCAAGCTCCTTCTCCAGGCTCAGCATCTCAGCATCTAGCCATGAGAGCTTTGAACTGTGTCTGTGGGCATCTGTGCTTTATCTCCTCTTACTTTTGGCATCTGTTAGCAAGACGTGTCCTAAGGTAACCGCTTCTTCACTTTACACCACTTCGGTTTCTGTTAAAAGGTTTAATGGGGGTGCCCAACTTTCAGATGGTGGGGAAATATGTTATCTCTTTGCAGACCAGTCATTCATCTCTATCTTTCTCTGAAAAACAAAATCGGGGCCCCATTTGTTGCTTTCTAACTCTGCTTCCCGCTGACCCGTGGCTCTTCTCCGCACTCATCTACAGTTCACCACTCTGCTTTTCAACTAAAGCAATTCTATTTCTCTTTGTTTTAATTATTTGTTGATTCACCTAAGATTTGGTCTGATTTCTGAGCAAAAAATCATTTGAAAATATCCAGAAGAGATTCTTTTAAGGTTCCTTCCAGAACTAAGACTTCTTGAATCGATGAAATGCAGGCTCTGGTCAGGAATGCAGACCTGTTAGTCAATCCTTAAATTATCTCAGCCTGGAGCTGCCTCTCTCTCTGTACATTAGGCCAGAAACACAGACCTTCTTTATTTTTTTCCAGAACATAAAGTTGAACTGTACAGGCTGTGATGGAGGTAAATGAGAAAGACCAACACATGTGTGTCAGGAAACAAGGGGCAACGTGGATGGCTGGCGGAAAGCGGGATTCTTCCTCCCCTGTTTCTTCAAACGGCCACTAGGTGAATAGTGAGAGAGAACTCTCCTACTTCCTTGCCTTGGTTCTGCACTCATGAAGTCTGGTTATGAGTGGACAGCACCAAATATTAATTGCTCTTTCAAAGTATATAGAACATCTTGGAAGACAGCCCTCCAAACTGTAAAAGTGTTGGTTTGCAGCTTCCATCATAGCTGGATCTTCTAAAGGCCATCCTACCATTTTTAAGGT TCONS_00135197 s 5' 69569 TCONS_00135197 s 5' 69774 EMBV3_19324 ACCACTGCCCAGAGTGACAATAAAATCACATGGTCCATTATCCGTGAGCACATGGGGGAG Gene GeneID:282147|ATP6V1A:NM_174504:35_cdna UTR3_Alt 2 NULL GeneID:282147 1 GENE ATP6V1A ATP6A1 MGC126942 ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A EMBV3_11409 TGGGCAGTGCGTTAAGACACCCACACTTTAGACTCCGCTAGCTACCATGCACTCTTGTGA Gene GeneID:617871|LOC617871:XM_002696766:439_cdna Constitutive 0 NULL GeneID:617871 21 GENE LOC617871 NULL similar to chromosome 14 open reading frame 132 EMBV3_03427 ATATACAATTTGCATTTTTAAATTTTCTGAGATTAAATGAGCATTCACTTTTACTTGTAG Gene GeneID:100336665|LOC100336665:XM_002699807:59_cdna Constitutive 2 NULL GeneID:100336665 X GENE LOC100336665 NULL misshapen-like kinase 1-like EMBV3_11722 CTGCTCGGAACTGCCTGGTGACAGAGAAGAATGTCCTGAAAATCAGCGACTTCGGGATGT Gene GeneID:507304|FES:NM_001032300:86_cdna Constitutive 0 NULL GeneID:507304 21 GENE FES NULL feline sarcoma oncogene EMBV3_22126 CCCTGTCCAGTTCAGCTTGCCCCTTGCTGCTTACTTTACGAGACCGTTTACTTCAGTTAG Gene GeneID:510686|RINT1:NM_001076829:120_cdna Constitutive 0 NULL GeneID:510686 4 GENE RINT1 MGC142626 RAD50 interactor 1 EMBV3_17721 TTGGTAACAAAGCTGGGAGGCTCAGGGGAGAGAAAAGCCTTGTTGTGGCCTGGCACTAAT Gene BVT0102_054968 + 1 EMBV3_41172 GK000016.2:42713219-42719366 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069219 TCONS_00069218 TCONS_00069220 TCONS_00069216 TCONS_00069217 1 XLOC_041893 Coding TCONS_00069220 XLOC_041893 Coding Coding CLCN6 16:42716891-42750170 j TSS51655 4860 1 TCONS_00069220_7 668 0.0279835390946502 20 0.854558567221588 0.000285513243642708 0.0003266480206415 0.000325576690601981 1.30302020009715e-05 5.13063121251541e-05 6.10796393702172e-05 0.00014212426737191 2.30976223931751e-21 4.04561850661193e-05 2.50264920363689e-05 1.12579198176584e-39 1.47048140324917e-05 1.42541256504459e-22 3.59137367365653e-47 5.8327296643126e-12 4.69840631255012e-19 0.000194672391843149 0.000685339720488358 0.000112665812919328 8.72556969526595e-13 0.000158174893493094 0.000133532518683169 0.000209393128740587 1.42325372642119e-15 0.000380618652131842 3.04137856121238e-11 2.59369743210263e-07 6.32173073253671e-05 2.68529972475965e-25 0.000517085598280078 XM_005216965.1 CLCN6 PREDICTED: Bos taurus chloride channel 6 (CLCN6), transcript 0.0 8230 100.00 0.938683127572016 NM_001286.3 CLCN6 Homo sapiens chloride channel, voltage-sensitive 6 (CLCN6), 0.0 3092 80.55 0.688271604938272 TCONS_00069220_7 sp|P51797|CLCN6_HUMAN CLCN6_HUMAN Chloride transport protein 6; 0.0 1293 96.11 0.998502994011976 2 coding 0 0 0 0 -0.095313203587663 0.465086672490888 -0.0294480774783462 0.604817373719841 GTGGCAGTAAAGGAGGAAGATGGCGGGATGCAGGGGGTCCCTGTGCTGCTGCTGCAGGTGGTGTTGCTGCTGCGGTGACCGTGAGACCCGCACCCCGGAGGAGCTGACCATCCTTGGAGAAACACAGGAGGAGGAGGATGAGATCCTTCCAAGGAAAGACTATGAGAGTTTGGATTATGATCGCTGTATCAATGACCCTTATCTGGAAGTTTTGGAGACTATGGATAATAAGAAAGGTCGCAAGTATGAGGCAGTCAAGTGGATGATGGTGTTTGCCATTGGAGTCTGCACCGGTCTGGGCTCTTTGTGGGGAAGGAAGGCCCCATGATCCACAGTGGAGCAGTGGTGGGGGCTGGCCTCCCACAGTTTCAGAGCATCTCCTTACGAAAGATCCAGTTTAACTTTCCCTATTTTCGAAGTGACAGAGACAAGCGGGACTTTGTATCAGCAGGGGCAGCTGCCGGAGTTGCTGCGGCTTTTGGGGCCCCCATTGGGGGCACCCTGTTCAGTCTGGAGGAGGGTTCGTCCTTCTGGAACCAAGGGCTCACATGGAGAGTGCTCTTCTGCTCCATGTCTGCCACCTTCACCCTCAATTTCTTTCGTTCTGGAATTCAGTTTGGAAGTTGGGGTTCCTTCCAGCTCCCTGGGCTGCTGAACTTCGGCGAGTTTAAGTGCTCTGACTCTGATAAAAAATGTCATCTCTGGACAGCTATGGACTTGGGTTTCTTCATCGCGATGGGGGTCATTGGGGGCCTCCTGGGAGCCACGTTCAACTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGAAACGTGCACCCGAAACCTAAGCTCGTCAGAGTCTTGGAGAGCCTCCTGGTGACCCTGGTGACCACCGTGGTGGTGTTTGTGGCCTCCATGGTGTTGGGAGAATGCCGCCAGGTGACTTCTGCGGCTCAAGTCGGGAATGACTCCATCCCGCTCCAGGTCACATCAGAAGATGTGAATTCAAGTATCAAGACCTTTTTTTGTCCCAACGAGACCTACAATGACATGGCCACCCTCTTCTTCAATCCCCAGGAGTCTGCCATCCTTCAGCTTTTCCACCAGGATAGTACATTTAGCCCCGTCACTTTGGCCTTGTTCTTCGTCCTCTATTTCTCACTTGCGTGTTGGACTTACGGCATTTCTGTTCCAAGTGGCCTTTTCGTGCCTTCTCTGCTGTGTGGAGCTGCTTTTGGACGTTTAGTTGCCAATGTCCTCAAAAGCTACATTGGATTGGGCCATATCTACTCCGGGACCTTTGCCTTGATTGGTGCTGCGGCTTTCTTGGGTGGGGTCGTCCGCATGACCATCAGTCTCACGGTCATCTTGATTGAGTCTACCAACGAGATCACTTATGGTCTTCCCATTATGATCACCCTGATGGTGGCCAAATGGACAGGGGACTTTTTCAATAAAGGCATTTATGACATCCACGTGGGCCTGCGCGGCGTGCCGCTGCTAGAATGGGAGACAGAGGTGGAAATGGACAAACTGCGAGCCAGCGACATCATGGAGCCCAATCTGACCTACGTCTACCCGCACACCCGCATCCAGTCCCTGGTCAGCATCCTACGCACCACCGTCCACCACGCCTTCCCGGTGGTCACAGAGAACCGGGGCAACGAGAGGGAGTTCATGAAGGGCAACCAGCTCATCAGTAACAACATCAAATTCAAGAAGTCCAGCATCCTCACCCGCGCCGGCGAGCAGCGCCGGCGAAGCCAGTCCATGAAGTCCTACCCATCCAGTGAGCTGCGCAACATGTGCGATGAGCATGTGACCTCTGAGGAGCCAGGCGAGAAGGAGGATCTCCTGCAGCAGATGCTGGAGCGGAGATACACCCCCTACCCCAACCTATACCCTGACCAGTCCCCGAGCGAAGACTGGACCATGGAGGAACGCTTCCGCCCGCTGACCTTCCACGGCCTGATCCTGCGCTCGCAGCTCGTCACCCTGCTCGTCCGAGGAGTCTGTTACTCTGAAAGCCAGTCGAGTGCCAGCCAGCCACGCCTCTCCTACGCCGAGATGGCTGAGGATTACCCGAGGTACCCCGACATCCACGACCTGGACCTGACCCTGCTGAACCCGCGCATGATTGTGGACGTCACCCCATACATGAACCCCGCACCCTTCACTGTTTCGCCCAACACCCACGTCTCCCAAGTGTTCAACCTGTTCAGGACGATGGGCCTGCGGCATCTGCCAGTGGTAAATGCGGTGGGCGAGATCGTGGGGGTCATCACACGACACAACCTGACGCACGAGTTTCTGCAGGCCCGGCTGCGGCAGCACTACCAGACCCTCTGACAGCGGGCTCAGGCTCAGCCTCACAGCCGCGTGCCGGCTGCCCTCTCCGGAAGCCGCCTTGGAGGGCAGCAGCTCGGGCTCCGCCACCACGGCTGGCCAGACTGTTCCCGGGCACGGAAGATCCCCAGTCACCCACTCGCTTGGAAAGCCTACAGTCATCGAACACTTTGCCGTCAGAGATCCTGGGGGTGGTATGGGACCATCAGAGCCTGGATTTGTCTCACTGCTCAGCAAGTATCTTCCCGTTTTCTGCTTCCTGCGTTCCTCCATCCAGTGCCGACCTAGGCCCCAGCCCCTGTCCCTGCTAGCACCAGGACCAGAGGAGAGTCAGGCCTTGCCCGCTGGAGGGTGACCCTCAGAGCAGGTGTCCCGCCTCCTCTTTGCCACTTTCCTAGGGAAGCCAGCTGTTGCCTTAAAGCATCATGGGAAGGGCTTTGGCCAAGGCAAACACGGGTTGGGGGAGATATGCCAGTTGCGGAACTCAGTGAATGAGGAATTGGGCCCTGAGAAAACCACCCATGTTTCAGAGAGCACCCCCCCCCCCAACTCATTGAGACTCAAGTTGACACCTTCACTAGTTCATTTTAAGGGAAGTTCTTCTGGGTGTGAGGTGGGGCCCTGTGGTGTGAACCTCCTTGGAACCACCAGCTCCAGAAGCACAAAGCGTTTAAATCCTGCTCGTGGTCCCTGAACTTTATGATAAAGCTGATGACAGGGTCAGATTTCCACCTGTCCCAGCTTTGAGCATTTCGGCTTTCTCTCTAATTTCCTGATTACCCATGGTCTCCTTGTGCTGTCTTTTCACCTCGGTCCTTCTCCTCTCCATCAGATTACTAAACTTCCTCAAGTTCTACCTGCCTTTTCGTGGTGAAGCAGCCACAGCCCAGAGGACCTTGCATCACCCCTAAAAGCAGGGCTCCCTTAGATAAAACTGCTTCACTTGACCCTGGGGAACAGTGCCATTATTCATAAGACGGGAGGGAGTGAATCCTGAACCAGGAATGTGGGCGGGTCCGTGATGTGGCTGAGAAAGCCCGAGTGTGACCGCACAGCAGGTGTTCATTCGAGGAAGAGGGTGTCTGCCCTTCATAAGCATCTCACACTCGCCTGCTGCCAGCCGTCCCCACCCTCCTGAGGGGCTCAGCAGCGGCAACCTCAGGAAGGGTTAATGGGTAGTGGGAGGTGCTTCCTGCCAGCTCACACCCCAAGGTTTTAGCGTCAGACATAGGAAGCCTCCCTCTCTGTTTCTGTGACTCAGTTTCCCTCTCGGCTGTTTGGTCATCTCTGAACAGGCACCCAGAATGAGCATCTGTGTGTCAAGCATTTGCACTTACTTTCCTCTTTGTTCTCTCTACATTCAGCAGCATGTTTTTTTCTTTTTTAAATTGGAAGACAATTGCTTTATAATGTTGTATTGGTCTCTGCTGTATTAACAGCTTGGATCAGTCATAATTATATACATATACACACAGCCCCCTCTCTGGAGCCTCCCTCCCTCCCATCCCTTTAGACAGCCCCACAGCAAATGTGCTTGAAGACTCAAGATGGCATCTGTTTGCATTTAGTTAGTTCCCGTTTTTTTTTTTTCTTTAATCATGGAAGTTGCCAGAGGGCATTAGTGCCAGGCCACAGCAAGGCTTTTCTCTCCCCTGAGCCTCCCAGCTTTGTTGCCAAGACTGCTGTTCAGCCTGGGGATGAGTACCCACCCTGCTTTGCCAGCTCTGGTCTTGTGCTCCACGCACTCTAGGGAACAACACCCGCACCCAAGGGCTGTTTCCACATTGTCCCCAGTGACTAGGGCCCCTCTGTTCTTCCCTTTTTCTCATCTCTTTGATCAACATGACTTTGATATATAAATTTTTTGACTCCCTTGGGTGCACTTGACTTATGAAACACAGATGAACATTCCAGTAAGTAATTGAGGAACTCACCAGGAACAAAAGAGCAAGCCCTCCTAAGTGTGATGGTGTTCAGCCAGCTGCCACTGTTCTCAGGCAGCATCCAGAACTGGAACCTGCTCCCCTCTTGCTGCCTTTCTCCCCTTCCTGAAATTGGCAGGACTGAGGTCCTCCCACCTTCAGGGGGCGGGGTCATACAGCTGTCTGGGAGGCTGCCCTGGGTGAGTGTTGCTGGAATTTATCCTTCCCGCACACCATGTTGTGTTTAAGTCACCTGATATTTTGTTCCCATCGGTGCAGCCCAGAGATAGATGGCAGAATGCAGACACCTCCCTCCCCCTGAACAGATGCATCAGACCCAAACCCAGCCCCTCTGGAATGGCACGTCATTGTCCTCTCCTGGCGTCTGCCCTTTCCAGACAAGCCCAAAGACTAGCACAGCTCCACTTGTAACACAATTAACTGTCAGCCTCATTCCTTTGATTTCTGTTAGTTAGAAACCTGCATTTCAACATCTTGCCTGTTTGCAGCACGGTCACCTCCCAGGGATGTGGCCTCAATAGATTCTCAGGGGCCAAGCTTGGGATTGGCTAGAGGTGGTGTCATGTTCCCCAGCTGAGGTGTCAGGGGA EMBV3_31802 TGATTGGTTAAGAGATGCCACCACTCAAGTCGGACGGGCCAACCTTGGGACAGACATGCA Gene BVV0101_048124 + 0 NULL GK000030.2:92142985-92147627 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247614 TCONS_00247613 TCONS_00247610 TCONS_00247612 TCONS_00247611 1 XLOC_151374 Coding TCONS_00247611 XLOC_151374 Coding Coding OTUD5 X:92114444-92144204 j TSS185386 5121 1 TCONS_00247611_5 510 0.038273774653388 10 0.828253637555025 0.000788291308044579 0.00175313255309273 0.00119396049954456 0.00254111498893209 0.000246001581272465 0.00271599546931103 0.000223993419100944 0.00119050703391549 0.000749493180655769 9.31460084551582e-06 1.82793521555922e-05 1.64595467844837e-07 1.9250064539323e-05 1.03816635691702e-28 2.15780620193018e-06 0.00184175444388412 0.0025504219732364 0.00025321445915493 0.00332186464222793 0.00106578317423799 2.1928790008522e-30 0.000635742829580537 0.0011011101394419 0.000215810341286794 0.00199032113072008 0.00389382367584035 0.00070960287186132 2.25236151376429e-05 0.000222726486502922 3.72920855884818e-05 XM_005228155.1 OTUD5 PREDICTED: Bos taurus OTU domain containing 5 (OTUD5), transcript 0.0 6863 99.92 0.743995313415349 NM_001136157.1 OTUD5 Homo sapiens OTU domain containing 5 (OTUD5), transcript variant 2, 0.0 2718 86.03 0.449716852177309 TCONS_00247611_5 sp|Q3U2S4|OTUD5_MOUSE OTUD5_MOUSE OTU domain-containing protein 5; 0.0 837 87.26 0.903921568627451 1 coding 0 0 1 0 0.487509020256859 0.408238321712305 -0.0125414276139442 0.856264443060697 TAGGGTGGGTATTAAATGACTTGTCAGAGATCACTCAGATAGAAGAGGCACAGCTAGGATTAGCTTGTAGTTCTCCATCCGTTCAGTAGCAGGAATTTTACCAACTTTACTGCTAGACGCTGGTTGGTGACCGAGCTGGTTTATAAACATTGCTCGATTCAGGTAAACAGTTTCAGAGGAGGGGGAAAAAAAGAAAAAAATTATGTGCCGCGCCTGCGCGCTAGCCACAGAGGCGGGGAGGTCAACGCGAGGGCGAGTGTACGCGGATGCCAGAAAGGGCGTGTCTGCTTCCCGAACACCCACTTGTCCCCACGATGCATGTCTGTCCCAAGGTTGGCCCGTCCGACTTGAGTGGTGGCATCTCTTAACCAATCACCGCGGAACTCGGCCTGTTGCCAGGGTGAAGCGGCGCCCGCCTCTCCACCGGATGTGAATTTGTAGGTGGGTGGAACCGGAATTGACGCTTCAGGGGCTAGCTAAGCCCTGGGAGTGTTGATATTTTTGCAGTCAGTCCGGCTGACTTCGGCCAATTTAAAAGCCTGGAAGGGAGGCGACTTTAAACTTGTGCGTGGGGCAAGCCACGCTATTCTGTCGCAGTGCCCCTGCCTGCGAGTCAGAGCCTCGGGGGAAGAAGAGCCGGACGGAACCAGCGAAGGGAAAGGCAAGGAACAAGGGTGCCGACTTTGGCTGAAATCTGAGACGGAGGGCAGGGGAGGGCGACGTCTGCTTCTGATTGGCCCGTGGTCATCATCGAACACCCACGCAACCGCTTCGATTGGTTGGTGCTCGCAATTGTTGTGGCGGCAGCGAAGATTTTGCCCACGTACTTCCGAACAAGAGGCGGGGCTGTGCCCCGGCGCGCCTGCGCAACGTTCCAGGCCCCACCCGGTAGTTCAAGAACCTGCGAGGGGGCGGGGCGAAGAGGTGCTTGTTTTGGTTCTGTTTCCTTTGAAGCCGTAGGCCGGAACGAGCGTAGCAATAAAGTTGTTGGACTTGGAGAGGCTACGACAAGCTCGCCGAGGTGCCTTAATCTTGGACTTCATATCCGAGTTCTCCTGCTGCGTGACCCGCGTTCTTCCGACGGTTCGAGAACCGGTGCCGCGCTCTCTTTATCCGGGTCCCGGCGATCCCGTCGTCCTTCGCGCACCACTGTACCCCCCCCCCCCCCCAAAAAAAAATCCGGGTCCTCTCCCAGCGTCCCCCGCGGCGGGTTTGCTGGGGGCTACTCGGCGGTGCCGCCATGACTATTCTCCCCAAAAAGAAGCCGCCGCCTCCCGACGGCGACCCCGCCAACGAGCCGCCGCCGCCCGGACCGCTGCCCCCGGCGCCTCGCCGCGGCGGGGGTGTAGGCGTGGGCGGCGGCGGCACGGGTGTGGGCGGCGGCGACCGCGACCGTGACTCGGGCGTCGTGGGGGCCCGTCCTCGGGCTTCGCCACCGCCTCAAGGCCCTCTCCCAGGGCCACCGGGTGCGCTTCACCGCTGGGCGCTGGCCGTGCCGCCCGGCGCCGTGGCGGGTCCTCGGCCACAGCAGGCCTCTCCACCTCCTTGCGGGGGCCCCGGAGGTCCCGGCGGCGGTCCTGGTGATGCGTTGGGTTACAACAGTGAGGATGAATATGAAGCGGCTGCAGCGCGCATAGAGGCCATGGACCCCGCCACCGTCGAGCAGCAGGAGCACTGGTTTGAAAAGGCCTTGCGAGACAAGAAGGGCTTCATCATCAAGCAGATGAAGGAGGATGGTGCCTGTCTCTTCCGGGCTGTAGCTGACCAGGTATATGGAGACCAGGACATGCATGAGGTTGTTCGAAAGCACTGCATGGACTATCTGATGAAGAATGCTGACTACTTCTCCAACTATGTCACAGAGGACTTTACCACCTACATCAACCGGAAGCGGAAAAACAACTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGGCCCGTGGAGGTGTACCAGTACAGCACAGAACCCATTAATACATTCCATGGGATCCATCAAAATGAGGATGAACCCATTCGTGTCAGCTACCATAGGAATATCCACTACAACTCAGTAGTGAATCCTAACAAGGCCACCATTGGCGTGGGACTGGGCCTGCCATCATTCAAACCGGGGTTTGCAGAGCAGTCCCTGATGAAGAATGCCATAAAAACATCAGAGGAATCATGGATTGAACAGCAGATGCTGGAAGACAAGAAGCGGGCCACAGATTGGGAGGCCACAAATGAGGCCATTGAGGAGCAGGTGGCCCGGGAATCCTACTTGCAGTGGCTGCGGGATCAAGAAAAACAGGCTCGCCAAGTCCGTGGCCCCAGCCAGCCCCGGAAAGCCAGTGCCACATGCAGCTCTGCCACAGCAGCAGCCTCCAGCGGTCTTGAGGAGTGGACCAGCCGGTCCCCAAGGCAGCGGAGTTCAGCGTCGTCACCTGAGCACCCTGAGCTGCATGCTGAGCTGGGCATCAAGCCCCCTTCCCCAGGCACTGTCTTAGCTCTTGCCAAACCTCCTTCACCCTGTGCACCAGGTACAAGCAGCCAGTTCTCGACAGGGGCCGACCGGGCTACTTCCCCCCTCGTGTCCCTCTACCCTGCTCTGGAGTGCCGGGCCCTCATTCAGCAGATGTCCCCCTCTGCCTTTGGTCTGAATGACTGGGATGATGATGAGATCCTAGCCTCGGTGCTGGCAGTGTCCCAACAGGAATACCTAGACAGTATGAAGAAAAACAAAGTGCACAGAGACCCACCCCCAGACAAGAGTTGATGGAGACCCAGAGACTGGAGACCATTTCCCAATCCCCACCACTCCTGCCCTCTGGTGCCACCCCACCTTCTTTGGCTTTCTTCCCTCTTGCCTTCTTCCTTCTTTCCGCTTCTTTCGCTCCTCCCCACTTCCCTCTGGCTGGCCCACCCCTGCGCACCCTCTCATCGCTGCCACCACCACCATCATCATCTGTCTCTTCGCCAGCTGATGTGCCCTGTTTCCCCTGCACAGCACCATCCCTGCATTCCACAGGGGACTTGGGCAAGGGTGCTGAAGGTAGGCGAGGGGCACACAGAGACAAACCAACTGGCAGCCAGGCAGCCCCGGAGGAGAGACAGCAAAGTCTCCCTGCCCCCTATTCCTTCCAAGATCAGAAACTTGTCACCCTACCTTCACAAATGATACCAGGGAGGTGGGAGGAAGAAGTGGGAAAAAATCCCCTTTCCAGTACCCTTAAAAGGTCTGAGCCTTCAATATTGAGGTTTTTCTTTATTAAAATATACTTTTATCTTATAAAATCAATCAGTGATGTAGACAACAGATTGGCTCTATGAAGGTGACATCTCTCTGGTTTGGAGGCAGGTAGGCCACAGGGCACAAAGATGTGGTTGAGGAACCTGGCCTCCAGCTCTGTGGAGATGGGCAGGATCTAGAGTATAAGCCAGGGTGGGGTGGGAGGGCAGGAAGGGGCAGGTGTCAAGTGGGCTTTGGACAATGAGACTCTGACCTCGCTGCATTCCTTATGCTTCCACCACCACCACCAGTCTTTTTGGAATCTCAGGGTGGGGGGTACTTTTGAGAATCATGGCTGTCGCCCAGGATTTGAGTGTGGGGGGTGGGAGCAACCTCGGCAGATGGGGCACCCATGCCTTGCAGGTGTCAACAAGATCCACCATCTGTAATGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCCTGAGCGCCTCTGTTCTGTGTGGGGCAGGGGGTGGGTGAGCCTTTTGGTCAGAGGCGGTGATGGCACAGACCTTGGCTTGACTTCTAAGGGCTATATGCTCTCCATTGGGGTCTCTCTGGAGGCCCAGAGTTTGTTCATACTTGATTCATTGCTTACTGAATCAGCCTTTGGACCTGTTACCACCAAGAAAGCTCTGTCTTTGCCCACTGCCCCTGCCTCAGTATTGGCACAGGATGTAGCCTGCCCACCCTATTTCCTGGGGTGTGATGGGAACAGAGAATTGAACTTGATGGCAGGGACTGAATGTCCCAACTTCTCTGCCTGCCTCTAGCCCCAATACATTTGCTGTTTCATTGTGAGTATTTGATGAGGAAATGCTTTGGACCGGCACAACAGTCGCTTCATAGCAACCTGAGTTTAGTGGAAGTGACCAGGGGGTGGACCCCCCACACAAGCACACTGGGTTTTAGAAATTGAGGAATAGCTATACCTTTTTTATTCATGTTCCCAGTTCTCTTGACACTTCTGTCCCTGCCCTTCCTAGAGATAAAGCCAAGGCAAAGAAGGATGGCTGGCCCCAGGTTTTTCAGTTGTTTTTTTCAGTGTCCCTCAATAATGGGGTCCCTGTGGAAGGATGTATGTCCAGCTCTGCAGATGAGGATGTGGCTATCTGCAGGTGTCTCTGGAATCCACTGGTTAAGCACTGTGTTGGAGAGTTGGTTTAAAACCGGCTTTTTCTAACTATGTGGCTTTGGTCAAGTCGCAGGCTCTCTGAGTTTCAAGTGTCCCACGTATAGGACAGGAGTGATAAATATCTACTACCTCACGCTCTCTCTGTTGTGAGCATTGAGAGAGTGTATATGGTCAACATAATGAATGACGGCACGGTGCCTGGCACATTCTGAGAGCTCTAATGTTAGCAGGTATTATTTATTATCTTAAAGTTGAAGTTTCTGTACTATTTGGCCCCTGACTACTTCATTTTGCCTCTCTGTCCAGTTTTCCTTGGCCTCCGCCTGGAATTTGCCCTTCCTCTGTCCCAAGCCTCCAACTTTGTCTTTCAAGATGGGTAGAGGGTCTCCTGAGAAGCCCTGTGTGACCCCATTTACATTCTCACCTTTATCTACAGATATGTCTTTACTTCTTCTCCGGTAACTGTACTATCAAATTCCTGGGCAGGGCTATGATGCCTGACTTAACCTGTGTATCTCTTAGTATCTGCACCCCCTCTAGGGCCTTGTAGGCTTACAGTAGACCCCTAATAAATGTTGGATGAATAAGGGAGAGTACCTGTGTATATTTGCTTTTTGAGTGTTTGTGTGTGAGAGAGACTGGTGAGTCTAAGCCTTTGTGCATCTCAGAGTGTCTCTAGTTGTGTGTGAGATGAGGGCTTGTTTCCAGGTGTGTCA EMBV3_33375 GCCCAAGTTCTGATCCGGTTCCATATCCAGAGGCACGTGATTGTAATTCCCAAGTCTGTG Gene GeneID:525193|AKR1B10:NM_001102088:17_cdna Constitutive 1 NULL GeneID:525193 4 GENE AKR1B10 MGC179497 aldo-keto reductase family 1, member B10 (aldose reductase) EMBV3_36850 GCGTTTGGTCCCAGGTGAATACATTCTGTCCCCCAACAGCTCAATCTAGGAACTCATTAG Gene BVT0102_045637 - 1 EMBV3_39960 GK000022.2:30080250-30101333 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00130720 1 XLOC_079428 NonCoding TCONS_00130720 XLOC_079428 NonCoding NonCoding - 22:30092771-30093540 - TSS97587 769 1 TCONS_00130720_3 84 0.315994798439532 1 0 0.000159234406267211 0.000104535113055131 0.000926603203277829 0 0 0.000683780136243188 0 0.00236895682183848 0.000348848777391362 0 5.95366465308772e-06 0 0 0 0 0 0 0 1.86500252055776e-05 0.000430175780433889 1.18429045914747e-05 0 0 0 0 0 0.000190479600604616 2.49809150264416e-05 0 0 NM_001102073.1 ILDR2 Bos taurus immunoglobulin-like domain containing receptor 2 (ILDR2), mRNA. 8e-39 165 89.52 0.159947984395319 0 noncoding 0 0 0 0 -0.0933554021219667 0.389232061445948 -0.0216799369493805 0.638052344969388 GGGGACTGCGGGGACCTCGGGGCCCAGAGAGCGGAGTAGGCACTCTCTGCTCGTGGAAAGGCATCCTTGACGCCTAGTTGTAACATGGGCCAAGTTGCCTCAGTCATGTCTGACTCTTTGCAACCCTATGGACCGTAACCCCCCAAGCTCCTCTGTCCATGGGGTTCTCCAGGCAAGAATACTGGAGTGGGGTGCCCTGCCCTCCTCCAGGGATAGTTATAACATATGCTTGTTCTAATGAATATCTGTTGCCATTTCTCTTGTCTATTTCATTTTATGTGTTTCGGGTTTTAAGAAATTTTAAATCTCATGTTGCAGACGAAAAATAACTAATGAGTTCCTAGATTGAGCTGTTGGGGGACAGAATGTATTCACCTGGGACCAAACGCTGGTTTTTAAAAGCAATTCGCAGGGGCTTCTCTGGTAGCCCAGTGGTTAAGACTTCACATTTCTAATGCAGGAGGTGCTGGGTTCGATCTCTGGTCAGGGAAGGAAGGTCCCATATGTGGCAAGGTGTGACCAAAAAAACAAAAAAACCAGCTTGTGTTCAAAGTCTATTACAGTGATCCACTTCTTACCTCCAGTTCTTAGAGATACTTTCTTCACTGCATGGGTTCAAAAGTATCTGTTTTTTAAAGCTGTAGCAATTTTGAGGTTAATTTGTAGCAGAATAGGAAATAAAGCACTCAGCTCATCACATTATTTCTAAGTCACTACCTATGTGTAGCCCCTCAGCTCAACCCTGATAAAATAACCAATGTGGTTTCCT TCONS_00126591 TCONS_00126595 . 3' 325 TCONS_00126591 TCONS_00126595 . 3' 1093 EMBV3_06605 CTGCTGCCACCATAAGAGGGAATTTTTACGTCACTGGAGACAGAGGAGTGATGGACAGTG Gene GeneID:100299006|ACSM4:XM_002698016:165_cdna Constitutive 0 NULL GeneID:100299006 25 GENE ACSM4 NULL acyl-CoA synthetase medium-chain family member 4 EMBV3_42957 GTCTCAGTAGTATGAACAACTTTGAGCAAATAATAGGTTTAACAGCATTTCTGATGGATG Gene GeneID:613812|RNF168:NM_001076289:98_cdna Constitutive 2 NULL GeneID:613812 1 GENE RNF168 NULL ring finger protein 168 EMBV3_06382 GTAATGGGCGCACGCCTGATCCTGCTGCCTTCTCTTACACACTTGTCCCTGGATCCCACA Gene GeneID:281518|TCN2:NM_174195:41_cdna Constitutive 0 NULL GeneID:281518 17 GENE TCN2 NULL transcobalamin II; macrocytic anemia EMBV3_28608 CTCACGCAGCTGCAGGACGCTGTGAACTCGGCTGCTAGCTTATATAAGCTGGAAGAGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34147 TTCCCTACCCAATCCCCCTTTGTTGATGAGGTTTCAGTGAGGTCTGTTAGGTGTGCATCC Gene BVV0102_017534 + 0 NULL GK000021.2:35191825-35206044 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168737 TCONS_00168746 TCONS_00098204 TCONS_00164320 TCONS_00168741 TCONS_00168740 TCONS_00168751 TCONS_00168755 TCONS_00202657 TCONS_00119310 TCONS_00168747 TCONS_00168739 TCONS_00119313 TCONS_00168748 TCONS_00164321 TCONS_00204640 TCONS_00202656 TCONS_00168753 TCONS_00119315 TCONS_00168754 TCONS_00119314 TCONS_00168745 TCONS_00168742 TCONS_00119312 TCONS_00168738 TCONS_00119311 6 XLOC_103174 XLOC_058450 XLOC_100202 XLOC_124016 XLOC_072869 XLOC_124496 Coding TCONS_00204640 XLOC_124496 Coding Coding - 6:20413972-20418826 - TSS153051 3148 2 TCONS_00204640_9 130 0.306543837357052 2 0.351741191015866 0.148505195416181 0.126002462205398 0.136800279474487 0.0993590771190472 0.130133882119036 0.0480536066423031 0.0760458575472801 0.114515044727616 0.17750770940019 0.0218214825413354 0.00281132127368957 0.00379017950592231 0.0240202229194392 0.0529367491886849 0.0398083188833594 0.0009935021033482 0.00224579179507347 0.0010368162934631 0.0998810081179903 0.0877740241495524 0.0433217597661745 0.000903736109012594 0.000777381793498529 0.00127469500945967 0.123708491525303 0.0914770614046789 0.0894469428108921 0.00130516825875574 0.00102207187226357 0.00196589778498949 XM_005203639.1 TPM3 PREDICTED: Bos taurus tropomyosin 3 (TPM3), transcript variant X14, 0.0 2928 90.58 0.64707750952986 NM_153649.3 TPM3 Homo sapiens tropomyosin 3 (TPM3), transcript variant 2, mRNA. 0.0 2233 83.14 0.64707750952986 TCONS_00204640_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-35 131 59.81 0.971698113207547 0 noncoding 1 1 1 1 -0.859087928639218 0.00683989089552069 -1.06405010848439 3.52673399974048e-05 ACTCAAAAAATGGGCCAAAGAACTAAATAGACATTTCTCCAAAGAAGACATACAGATGGCTAACAAACACATGAAAAGATGCTCAACATCACTCATTATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATTTCACGCCAGTCAGAATGGCTGTGATCCAAAAGTCTACAAGCAATAAATGCTAGAGAGGATGTGGAGAAAAGGGAACTCTCTTACACTGTTGGTGGGAATGCAAACTAGTACAGCCACTATGGAGAACAGTGTGGAGATTCCTTAAAAACCTGGAAATAGAAATGCCATACAACCCAGCAATCCCACTGCTGGGCATACACACTGAGGAAACCAGAACTGAAACAGACACGTGTACCCCAGTGTTCATCACAGCACTGTTTATAATAGCCAGGACATGGAAACAACCTAGATGTCCATCAGCAGATGAATGGATAAGAAAGCTGTGGTACATATATACAATGCAATATTACTCAGCCATTAAAAAGAATACATTTGAATCAGTTCTAATGAGGTGGATGAAACTGGAGCCTATTATACAGAGTGAAGTAAGCCAGAAAGAAAAACACCAATACAGTATACTAATGCATAGATATGGAATTTAGAAAGATGGTAATGATAACCCTGTATGGGAGACAGCAAAAGACACACAGATGTATAGAACAGTCTTTTGGACTCTGTGGTGGAGGTGGGGGATGTTTTGGGAGAATGGCATTGAAACATGTATAATATAAGAAACGAATTGCCAGTCCAGGTTCGATTCAGGATACAGGAAGCTTGAGGCTGGTGCACTGGGATGACCCAGAGGGATGGTACCGGGACGGAGGTGGGAGGGGGGTTTCAGGATTGGGAACATGTGCACACCGTGGCGGATTCATGTTGATGTATGGCAAAACCAATACAATATTGTAATTAGCCTCTAATTAAGATAAATAAATTAAAAAAAAATAAAGAGATTGTCATATTGGATTTATTTATTTTGGAGGGACTGGTTATTTCAAAAAGACATTTATCAATTTTCAGTATCAAAACAGTTACACTATTGGTTTTTTTTCTCCCAATTGGTCCCCAAAGAGACCACACCAAAGGAGAGGACATTTTAAGCCAATTAAGCTGCAGGATGCACCCCTAACAGACCTCACTGAAACCTCATCAAAAAAGGGGGATTGGGTAGGGAAAGAAACTTTAAAAGATCAGCACACTGCTAGCCCACAGACTGTAGAGAGCTCTCACAGGCAGAGGGGTGACCAGTTTGCCTCAACCCCAAAGAAGCAAAGTTCCAAAATATAAAAATTTACAAGTTTTGTACATACGCTTTTCAAGATTTCTCCAGCACTAACCAATACAAAGCACAGTGAGATGGCACTTTTAGAGACAGCAGCTTCAGACCCAGAAAAGGGTGATGAGATGAGTTTCATATGGCTAAATCAGTGGCAAAACATAATTTTCTTTCCTTTCTTTCAAGGAGGCAGGAGAGCAAATAAGTGGTCACTTCAATATAAGGGGCACATGATCCATTAGTAGTTGGGAACAGGGTAGAGCTGGGACAAGGATTTGGTCTCAGAGGTTTTACCATCTTAATTGTTTGGTCACTTCTGATGAAAAAAGAAAAAAAAAAAGTTGTCCAAAGATACCGTAAAGCTGAAAACCTGAACAGCACTTTTTTTTGGCTAACTCCTTCTGGAATCATCTTTCTGCTTTGGCAGGTACTTTTTACAGGGCAATGAGGTTTCCCCAAATGGAGCCTTTCTCTGGGCTGCTAGGCTCTCAGTAAGGCAGGCCCAAACCTTTTCCCTTTCTCTCTGGAGAAGGCAATTAAGCTGAAATGTTACCTTCCAAAAGTGAGAAAGGGATTAGACTGCTGCTTCAGTTCTACGGAATTATCTGGAATGTTTTTTTACAAATGGTTGTAACATCAAGAACAAAAAAGGTAATTACAAAATGTGTACATCACAACATGCTTTTAAAGACACTTTGCATTGTGCTCACATTCCCTTAAACGTTGTTCCCAAAGGTGCTCAGCCTCTAGCCCACCTGGAATCTCTGGGGAGAAGCAGAGACTGGCGAAAAGGACACAGGAGTAGGGGGGTGGTCAGCTTCGGGCAGGCTGGCCCCAGTGGAGTCGGAGTCGGGGTGAGAGGGAGGAGCAGCGGCAGGGCGGGGCTGGGGTGCTCTACATTTTATTCAGGTCAAGCAGAGTCTGGTTCAGCATCCTTTGTGTACAGAGGTCCTCCTCTTTGGTGCATTTCAGTTTATCTTCCAAATCATCAATTGTCTTTTCCAGCTTGGCTACTGATCTCTCAGCAAACTCAGCACGAGTCTCTGCCTCCTTGAGTTTTTCGGTAAGAATCTTTATCTCTTCCTCATATTTGTCTTCCTTTTGAGAGTACTTTTCTTCAGCAGCACTCAGACACTTCAGGTGCTGGTCCATCAGTCTGATTTGCTCACCCATCTTTCGGCAACGGGACTGTGCCAGCTCCGCTCGCTCCTCTGTGCGCTCCAAGTCTCCCTCAATAATCACCAACTTGCGAGCCACCTCTTCATACTTCCTGTGTGCCTCTTCTGCAATGTGCTTAGCTTCTTTGAGTTGGATTTCCTGGAGTTCCATTTTTTCTTCATCTTTTAAGGCTTGGTTTTCAATAACCTTCATAACTCTCTCGCTCTCATCAGCAGCTTTCTCAGCTTCCTCCAGCTTTTGCAGCGCAGTGGCCAGGCGCTCTTGAGCTCGGTTCAGCTCCTCTTCAACCAGCTGGATCCTACGGTTTAAGGAGACCACTTCAGCCTCAGCCTGTTCTCGGGCCCATCTTTCTCCATCCACTTTCTGCTGGAGGCGCTTGGCCCTCTCCTCTGCATCATCGGCCTGCTGCTGCAGAACCTGGATCTTGCACTTCATTGCCTCGGTGACAGCGATCGCGGCCATGACAGTGGTCCCGGCCATGGTCCCCACCCAGCTCCTGCTTGCCTTCGGGTTCCTGCCTCCTCCGCTCGGCGCTCGGCGTTGCAGCCGCTTCTCACCCAGCTTGGTTCCTGCAGGGTTGAACTTGTGGCCCACACTAGGCGAAGAGCATGCACAGTCAAAGCTGACAGTAGGAAGCTTGGGATACTTAGGAATGGTGGGTTGCAGTTTATGGGGT TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 35715 TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 30976 EMBV3_01693 CGAGGGGAGGAGGCTGCTGACTCTAAAGAGGATGTGATGGACAGTTATTGAAGGCACTCA Gene BVT0102_108447 + 0 NULL GK000005.2:26019919-26136684 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194265 1 XLOC_117702 NonCoding TCONS_00194265 XLOC_117702 NonCoding NonCoding LOC100847613 5:26100013-26134465 = TSS144991 511 1 TCONS_00194265_2 94 0.107632093933464 3 0.985254419320194 0 0 0 4.87524116009354e-05 0.00108212188885379 0 0.000194009735831784 8.102357413107e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.89380588196554e-05 0 0 0 0 XR_231065.1 LOC100847613 PREDICTED: Bos taurus uncharacterized LOC100847613 (LOC100847613), 7e-126 453 100.00 0.489236790606654 NR_026655.1 FLJ12825 Homo sapiens uncharacterized LOC440101 (FLJ12825), non-coding RNA. 8e-62 241 87.38 0.395303326810176 0 noncoding GATGCCACAGCTTCTGTGGGGCTGGGGATTTCTTGCCCCGAGTAATGGGAGAGGCAAGGCGCAAGAATGCCTGCTAGCGTATTGTGTGTGTCTCTCCAATGGCTAAGTAAAAAGAAGACGGGGTGAAACCGGCAACACCAATCTTCCAAGGTCCTTCTCTCCAAGCACCAGGAGATCCCCACAGGTCAAAAATCCCCTTGACATGAAATACATATACATGGTTGAGAACTCAAAAGGCATCAAAAGTTATACAGTGACAAGTTGTATGTTTTCTTTTGCCTTGAAGACTGAGAGCTCCCTGGGGGCGGAGCTCAGTGCCCGTCCCCGGATCTGCCCAGCATCTAGGTGTGAAGGTCAGCAGGCCCCAGGGCTGCCCAGGAAGAGGCTGGTGAGCAGGGCAGTCCGGCAGCCCTCCTCGGTCCCAGGCTCCCTGAGCCGAGGGGAGGAGGCTGCTGACTCTAAAGAGGATGTGATGGACAGTTATTGAAGACACTCAGCTGGGGGCTCCACT EMBV3_09530 TAGGATGTTGTGACTTAGAAAAAATAATAGAGATGTCTTCCCCCCTTTTGTAGCTTTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40023 TGGAGCACCAGGGTAGTCGCCCCAAACACAGTTGCTTCTTATTCACTCCGGGACAGTTTA Gene BVV0102_187871 + 1 EMBV3_07188 GK000003.2:56846709-56853714 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17472 GAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGAAGACCACAGTCCACTTGCTCAT Gene GeneID:281791|GNAI2:NM_001101040:34_cdna Constitutive 0 NULL GeneID:281791 22 GENE GNAI2 NULL guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 EMBV3_21763 TGACGGACAGCCCCCCTCTTTGCCTGTTGCCCTTAGATCTCCCAGTCAGATGAGATAAAA Gene BVT0102_102575 + 0 NULL GK000004.2:78555491-78816507 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188949 1 XLOC_114990 NonCoding TCONS_00188949 XLOC_114990 NonCoding NonCoding - 4:78710028-78710992 - TSS141317 964 1 0 0.000169365578199667 1.04236955428044e-05 0 1.72285178966595e-05 0.000476304174949035 0 1.2098943550319e-05 0 8.18479446654684e-05 0 0 0 2.97643514373146e-06 0.000204946031264072 0 0 0 0 0.000312425885555558 0 0 0 0 0 0.000136557097120007 0.00025580065294218 7.29354794226867e-05 0 0 0 0 noncoding GTTGAGTCAATAATAACTGAACTGTAAAAGTCTTTTGGAGAAATGTATGTCCAGCTTTCTGCATGGATCTTAGCTGAGATTTGAAAAGTGATCAGCTTTTATCTCATCTGACTGGGAGATCTAAGGGCAACAGGCAAAGAGAGGGGCTGTCCGTCAGGGAAGGGGGAGGCCTGGCACCCCCATCTCCAGGGGAATGAGGAAAGTCAAGTCCTGATGAATATGTGCGTGTCTCCTTGGAGAAAGGGGGACAGCTGGTGAAGCTGCCTTCATTATCTTCCAAGGCTTCCAGTTCTGGAAAGTTCTGGCTTTGAGAGAGAACTCAAAACCAAGAGTTGAGTCGTGAGAAGCAGCCCATCACACAATCTGGGACTTGGGTTTCTGTCCTCTGGTGTTCAGTCAGGAGTCTGGAATCAGGGCCTGCCTTTTGTTTAGCTTAGGGAGGATTACATTCAACACATGGGAAGAAAAAAAAAAAAGAAGATAACTTCTCAGAATGTGAACAACATCTAATGTAAACGATGCTGAACTGGGAATGGGAGAAATAGAAAAGCTTTGTGAAGAATGCAGTTCGGTCAGAAAGTCAGAGTCTGGAGATTATGTCCTTCTAGTTCCAGCATTCTGACTGCGTGCAGTTCAATGTAAAACCCAGTTTGAAAGCTAGTCTTGCCCAACAATAGATTTTCCCGGGAAGAGGGCTATTTTCATCCTTTGCATTTGTAATTACCATGTTTGTTTTGTGTGTTTGCCATGCGGGGACAAGAAGGTGCCCAGGTAGGTGTGAGTGCTCACAATGATACAAAACAGGAAAGTGTGTAAGAACGAGGCCAGGAACACCTGTCATAGGGTACCCGCTGGGGTGTCTGTACCACGTCCTTTCTGAACGCACTGTTTGCACACACACAAAAGGGTTGGGGCTGGATATGCCCAGTACGCGTGCCGAGTGTTGGAAGGATGGGGCCGGCGG TCONS_00184655 . 3' 25977 TCONS_00184655 . 3' 26940 EMBV3_16631 TCCTTGTCTTATTGGATGGGCTTTGAGTGTACCTACCTGTGGCTACTCACGCCTTTCTGC Gene GeneID:100295939|LOC100295939:XM_002707856:21_cdna Constitutive 0 NULL GeneID:100295939 7 GENE LOC100295939 NULL similar to olfactory receptor, family 1, subfamily G, member 1 EMBV3_37745 AGAGATATAGAGCCCAAGGACGTCAGTCTTCACCCCGGGCACCTAACAATGAAGCAACCT Gene BVT0102_292122 + 1 EMBV3_30008 GK000002.2:136351001-136362235 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113008 1 XLOC_068903 NonCoding TCONS_00113008 XLOC_068903 NonCoding NonCoding - 2:136361221-136362077 - TSS84629 856 1 TCONS_00113008_1 80 0.240654205607477 1 0 0 0 0 0.00010671214805358 0.00222058293655914 1.25364215747642e-05 0 0 0.000534612780309081 0 0 0 0 0 0 0.00018512788127804 0 5.86237963417963e-05 5.02636275175795e-05 0.000873724715736254 9.22064093339243e-05 0 1.07173569320563e-05 0 3.23760629117613e-05 0 0.00011636157459906 0 0 0 XM_005200916.1 LOC101905263 PREDICTED: Bos taurus zinc finger protein 431-like (LOC101905263), 4e-11 73.4 84.06 0.0771028037383178 0 noncoding GAGCGATTGAATTGGTGTCCCCTGCATTGCAAGGCAGATTTCTAACGACTGGACCACCAGAAAGCTCCCTCCGTGAGTGTTTAACCAGGGGTCTTTGCATTATTCAAGTGTGTAGCACAGATAGTGCTTTTCAGAGTGAGCTTGACCCAGATCTGTTCAATAGCGTCTTGCCTTCCCAACTTGAGAGCAGACTTGGTTCTGACCCAGCCCCATGTCCTATGAGGTGTCCCAGAATGCCCACTTTATCCCAGGGTGGTGGGCTGGCAGTTCAAGGTTGCTTCATTGTTAGGTGCCTGGGGTGAAGACTGACGTCCTTGGGCTCTATATCTCTGGCACCCCCTTCGATCACATGCTGTACAGATACTTCAGGAAGGTTGGCATTCACACACCAGATTGCTCCCTTGGAAGGGGGACTTTGCTGGAACCCATCCCATCGCAATAATGATGATGGAAAGAACAAAGAGCTTGGGAACCAGTTACGCCTAAATTCAAATCCTACCTCCGCACCCCAACTACCCTGCAATGTGGCTTTGGGAAAATGATACATCCTGTGCCTCAGTTTCCGCACCTGAAAAATGGAGTCAGTAACCAGTCACACAGTGGTGGTTACAGTTACGGGAGGCTTAGTTGCATAACCAAGGCACTGAGTTTCTCTCCATCAGTTGGCATCAAGAGCACTTGTGCTCATCGGACCCTGAGAAGTACAAGTGAATTAACTGACATCTATTACAGTCTCAAGCCGTTGGTAAACCTGCTTGATTGTCCCAAGGAGTGCGGGTGAGAGCGGTTCTGAGGCCGTCCTTCCCTCCAGCCTGGCTCCACAGGCGGCGTTCCGACCTTGGAGAACCTGCCGGGG TCONS_00104258 . 5' 145 TCONS_00104258 . 5' 145 EMBV3_37389 TTTCCAGGCTGTCAAAGGAGACATCCTGAAACTGTGGAGCTCTGGGGTCCCCGGTGGCTG Gene BVT0102_325751 + 0 NULL GK000005.2:120995980-121036560 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20284 GGGACGTGGCTTTATGCTGGGCAGCTTTCCCGTTGCTGTTAATCGGGGAATTCTTTTCGT Gene BVT0102_256556 + 0 NULL GK000007.2:112308285-112332876 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218351 1 XLOC_131687 Coding TCONS_00218351 XLOC_131687 Coding Coding LOC100295019 7:112060617-112323473 j TSS162362 2942 1 TCONS_00218351_6 635 0.0418082936777702 14 0.988860778756349 0.000459188678914236 6.45737200764088e-36 4.68302690604481e-41 8.08130969750411e-06 4.5306345588628e-06 1.98572603405986e-05 7.24861518923758e-05 1.7299200551166e-83 1.09158223695254e-26 1.8839501038741e-102 2.92553382471478e-31 5.82383708549427e-15 7.51051096645744e-104 3.34889187359927e-06 4.34639079165292e-28 4.19182658902093e-05 0.0003108519828157 9.06542780714758e-05 2.22983368619639e-05 0.000235372447220945 2.93834184769387e-06 1.02878331431543e-62 3.98916865001186e-86 2.29364580280294e-33 6.72976150735365e-06 7.03554447496792e-05 1.67025912946687e-05 6.00484143437705e-22 4.35874354687468e-36 4.44529761348354e-38 XM_003586351.2 TMEM232 PREDICTED: Bos taurus transmembrane protein 232 (TMEM232), mRNA. 0.0 4251 98.88 0.811012916383413 NM_001039763.3 TMEM232 Homo sapiens transmembrane protein 232 (TMEM232), mRNA. 0.0 1934 78.35 0.799116247450714 TCONS_00218351_6 sp|C9JQI7|TM232_HUMAN TM232_HUMAN Transmembrane protein 232; 0.0 949 72.09 0.990551181102362 0 coding 0 0 0 0 -1.22836848923527 0.0375059487617685 -0.0281099553868649 0.678740433095807 AGAGCGGATAGGCTGAGGATGGGGACGTGGCTTTATGCTGGGCAGCTTTCCCGTTGCTGTTAATCGGGGAATTCTTTTCGTTTCCTCTGCACTCGGACTTCCTTGTCCTGCGGGAATCCTTAGCTTTGAATCCTGCTTTCCACTCTGGGCAGTTTCCAAGGCCTTACAGACTTGGCGAGATGCGCTCCCCTCCCCTCTCGCAGACTTCGAAATTTCAAAAATTTTTAAGTGTTTGGCAAGTAAGGGTCCAGGGAAAAATCCTTGAGAATGTGAGATGCAAGGATTTTTTAAAAAGCAGTTAATCTTGATAAAAGAGCCCAAGTTATCTCTTAGGAAAAATTTCCAGGAAGAGGTAAGGTGATGGTTGGAGAAGTAGATGGCACCCCACTCCAGTATTCTTGCCTGGAGAACCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATGGGGCTGCAAAGAGTCTGACAGGACTGAGCAACTAACACACAAGGTTTATGATCTGTGAACATGCCTAACAAATCACCTGTGATTGGCAAATCTGAAGTAGTATCTTCCTCTTATGAAAAATCAAAGCCACCATTTTCAATCACAAAAGAATTCATCTTGAGATTCAATCAAACAAAAAATCCAAAAGAGGAGGAAGAACTGTTGGACATAGCTAGAAAAAACATTATCAAATGTAAGAGAAAACTGGGTCTCAGGACCTTAGGGATGGGGAGGCACGTGCACCTTCCCGATGCATGGACCCAAGTGGTGTACCTGGCTCAGTGCAGAGGAGAAGTCCAGGATGAAGCTTTGAATATGCTCTATGCTTCCCTGGACCATGCTGTCTTTGATTGCGATCATCTGCCTGCCTTATTTTTTGTTGCGGAATCAGTTCTATACAGACTCTGCTGTGATGCATTCCAAAAAGCATACTTATACTCAGTTGAAATCAAGCTGGCAAAGATTGGCTATTTGGTCTTCTTACGACTTTTTATATATTTCCTTCACGGTCACCTGGAAAATTTTAAACAACATTTACTTAGGCTTCAGCCATATTTATACGCACTTTCTTGCTCCAAAGAATTATATTGGATGTATCCAAACATCTCTTCGAATGTGCAGTGCATTCTGAAAATCATGGAAATCATATGTAAAAGAGAACTCCCTTCTGAATCAATTTTTAGGCCTGTGGAGGACAAGAATACAGATTCTGCAATGAAAGGATATGAAATTAGCCACCTGCTCTGGCACTGTGTTTCTGCCTGGACTTGTGTTCAGAAGAACAGTCCCCAGTTAAATAAGGTGCTTGAACATCTCATCTCTCGTAAAACACAGCTTCAGAAGAAATCCTGGTTGGATTTAGCCTTGGCTTTGTTGGTTCTTGGGGAGGCTGCCAGATTAAACATGGCTTGTTTGAAAGCGTTCATGGACCTAATGAGAGATTTTCTGTTAAGCATTATGTCTGTTCAAAACCAGGATAAAAGCTGCGAGGTAGATGATTCTTCCTGGGCCCAGAATGTAGTCACCATATACATAAAAATTCTTGCAGAAATCTGCTTATATGCGACCAATTCTGTTTTGAGAAAGACTGCTTTAATTGGTTTCTGTGACTGTAAAAGTTCACAGAAAGATATTTTACTTGTGGACAAATCACAAGAAGAGCCAGAATTGAGGGAAACAAGTATTTCAGGTCTTTTGGAATATTTCTCTTCAGAAACATCAGATTGTTGTGACCAAGTGAAATGGGCTGGACGCTATAGCCTACTGTACAACCTGGTGAAAATGTCATGGGAACTTCGGGGAGATAAAGAGCAGGATGGACTTAGGAACAAAATATGGCAAATGTTACAGAAAACAAAGGATCGTGAGAAAGATGGGCGAATCTGTAATGCAGTAAATATTGCTCAAGCGGAGATAAATGACCCAACTGATCCTTTCACAAGTAATAGTACAAAAGTTTCATCAAATATAGGGGATGAAAGTTTCTCCAAATACATAGGCTGGAGAATTGCCAGCGTGCTTTCCAAACTGTTCTTCCCTTCCGTCGATGCCTGTGTTCTTCCTCTGAAAAGACCACTGATGAAACGGTATCAGAGGAGAGATGTGAACAAAATGCAGGGTTCCATGAAGAAGAGAGTCCTATGTTTTACTGTAAGGGAATATTCTTCTGTGGCAGAAGCGCCTTTGTTTCCATATCCAGATTTTTTCACCAGGGCGGACAGAGAGTTGGCAAGAATCGTTGACCATCACTGGCAGGAAGAGCAAAAGATGCGGCAGGAAGAAGACGCAATATGTGAGGCTGAAGAACGGAAAGATAAGGAGTTACAGGAGCAAAATCGCTTGAGAGAAATAATGAAGAGAAGAGAAGAGAAGCTACACAAGCAAACCAAACCTTACGAGCTTCCTCCTAGGATTAAGACGTTTCCTTAGGAAAGAAAATGACCCTGCAACTGAGGTCCATATGCCAGAATTCGTTGCATGAAAGAGACCAAGAAAGCTACAGATTAGGAAAAAAGTTCTTAATTAAATGTTATTTCTTAGAAAGGAGTTTATCCTGGTGCAGGTTCTTTAATAGTCATAGCTTAGTCCTAAAAGAACAGTTAGCACTTGATCACATTCGAGTGACGTGTTTTCCTAGTTAAATGTTTTCAAGAATGTGGCTAGAGCTAATTGACTCTTATCTCATGATCATACACATAATGATTCTCAGAGTATTGAAATTCACTGAAGAGTTAGATAGACACGATTATTGCATACAATCATATATTGCATATAATGATTATGCAAATTATTAATGAGTCACAAATAAGAACTATTTCTTAAAATGGGATGAACATCAATCAGTACTCCTATAATGACTGTAACACTAATAAAACATGTAAGGCTCCTGCTTGGGTTTGTATTTCATAGTCAATCTATGCCAAGTCAAACCACGTGTCAGAAGCTTGTGTTATAT EMBV3_26164 CCGTAGAAATGACTCCAAAAACACCTGGAATCTGGTTACTCCACTGCCATGTGACCGACC Gene GeneID:514194|CP:XM_002685026:200_cdna Constitutive 0 NULL GeneID:514194 1 GENE CP NULL ceruloplasmin (ferroxidase) EMBV3_26050 GACCTGTGGTCCTTATTTATCTGCGGCCTGCCTCCAGTTCTTGGTTGGATTCTATGGTTC Gene GeneID:100299628|LOC100299628:XM_002699123:188_cdna Constitutive 0 NULL GeneID:100299628 29 GENE LOC100299628 NULL hypothetical LOC100299628 EMBV3_15677 TCTGGCTATGCTTGGAGTTCTTGTTGCTTCTAGCTGGCACCTGTGTTCAGTCTCCCTCCA Gene GeneID:516411|SMG6:XM_002695687:231_cdna UTR3_Alt 2 NULL GeneID:516411 19 GENE SMG6 NULL Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) EMBV3_08304 TGGGAGCAATGGAAGGTTCTAGGCAGAGGAGGGTTTTCCCCTGACTTATATGTTCACAGG Gene BVT0102_106636 + 0 NULL GK000007.2:12583936-12610667 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215431 1 XLOC_130957 NonCoding TCONS_00215431 XLOC_130957 NonCoding NonCoding - 7:12591129-12604844 - TSS160909 791 3 TCONS_00215431_1 57 0.601769911504425 4 0.942613387778912 0.000126352837140674 3.12032648461219e-05 2.70648696681494e-10 0.000178470326572486 0 0 5.32884152751733e-05 0.00179460016603163 0.000651022877188878 8.32263621554997e-05 0 0 8.71305422177807e-06 3.56812250958588e-05 0 0 0 0 0.000498611080091715 4.35616314498816e-05 0 0 0 0 8.75911194922369e-05 2.2865514608458e-05 7.09550885070762e-05 0 0 0 XR_235142.1 LOC101904934 PREDICTED: Bos taurus uncharacterized LOC101904934 (LOC101904934), 4e-62 242 98.58 0.175726927939317 NR_026711.1 ASMTL-AS1 Homo sapiens ASMTL antisense RNA 1 (ASMTL-AS1), transcript variant 6e-09 66.2 74.53 0.131479140328698 0 noncoding 0 0 0 0 0.0164839395880429 0.904652069809977 -0.00592090760589802 0.9333236101297 AGGGAGGGGGTGAGGGCAAAAAGAGAGGAAGGTGAGGGTAGGGAGGTAATGGGCTAGACCATCCTGGCCTGATGTGCTTCGGGGAGAATTGGTTTTTAATCGGAGTCACCTGGGAGCAATGGAAGGTTCTAGGCAGAGGAGGGTTTTCCCCTGACTTATATGTTCACAGGAACCTTCTGGCCCTGGTAAGATTTGAGAAGGAGCCAGGAGACTGGGGAGATGGATTCCACAGTCAATCCAGCTGAGAGTGCGGACGCTGCACCTTCCTCACTCCCAAGAAACAAGAGTCCAGGAAGCCACCCAGGTCCAGTCTGAGCAACAGCTGGCAGGCAGCAATGGTGGTCCATTCCCGCATGCAGAACTTCCCTGAACCCATGTCCCCTGCATCAGAAACATGGAGCCTTAACCACCAGAACACCAGGGAATTCCTGACCAGCATCCTTAGAAGAGAAGAGGAAAGGACAGTGGAAAAGGCCACATGAAGATGGCGGCAGAAGTTGGAGTGATGCAGTCACACAGCAAGGCACACCTGGAAACGCCAGACGCTGGCAGACACCAGGTTCCTTCCTGGTCTGGGAAGACCCCATATGCTGAGGGGCAGCTAAGACGGTGTGCCGCAACCAATGAGCCCACGTGCAGCAACTACTGAAGGCTGTGTGTCTTAGAGCCTGTGCTCCACAAGAGAAGCCACCACAATGAGAAGCCCACGCACTGCAACGAGAGAGTACCCTTGTTGGCTGCAACTAGAAAAAGCCCTCGAGCAGCAATGAAGACCCCGTGCAGTCAAAAAC TCONS_00211795 r 3' 7195 TCONS_00211799 TCONS_00211800 TCONS_00211801 TCONS_00211802 r 5' 5824 EMBV3_07891 GATCTGGAGGACAGTGAAGTTCAAGTCAAATCAGTGTAGTCTTCCTTGCCCATGACTAGC Gene BVV0102_021662 + 0 NULL GK000009.2:15765684-15798579 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234791 TCONS_00234792 TCONS_00234802 TCONS_00234804 TCONS_00234808 TCONS_00234794 TCONS_00234805 TCONS_00234807 TCONS_00234797 TCONS_00234806 TCONS_00234809 TCONS_00234803 TCONS_00234795 TCONS_00234798 TCONS_00234790 TCONS_00234799 TCONS_00234796 TCONS_00234793 1 XLOC_144099 Coding TCONS_00234795 XLOC_144099 Coding Coding MYO6 9:15610355-15767604 j TSS176195 8319 1 TCONS_00234795_5 1254 32 0.947299806674807 0.000888279085992165 0.000833031833573753 0.000669638013909957 0.000452216873324451 0.000297408771050586 7.42372910963605e-05 0.000193282432976954 0.000729775866627288 0.000926196243932847 0.00012958155634438 2.52190595940425e-14 1.54500424272274e-13 2.70592698826707e-05 9.17268768979233e-06 5.67129890196182e-05 0.00350796686340703 0.00176274420373338 0.00239245848713389 0.000357276393406951 0.000410496348620909 3.2242565408064e-12 0.000191284691643229 0.000231165440530065 0.000963773473578033 0.000671588533335492 0.000323345606955683 0.000646949615099385 9.2463750762502e-05 2.79985566089361e-18 0.000412825744819289 XM_005210680.1 MYO6 PREDICTED: Bos taurus myosin VI (MYO6), transcript variant X7, 0.0 1.492e+04 99.68 0.997836278398846 XM_005248726.1 MYO6 PREDICTED: Homo sapiens myosin VI (MYO6), transcript variant X8, 0.0 6437 87.43 0.627479264334656 TCONS_00234795_5 sp|Q9UM54|MYO6_HUMAN MYO6_HUMAN Unconventional myosin-VI; 0.0 2414 93.59 0.999202551834131 1 coding 0 0 1 1 0.028620732114003 0.848408494889455 -0.0187480891814252 0.70964269694244 GGGCGCCGGCCGGCGGGAGGAGACGGACCCGGGATCTGTCCGAGCAGGAAGCGAGCCGGAGACCGGTCGCCGCCGCCGCCGCCGCCGCCCCGTACTGGTGCCGGCACTCGCCGTCGCTGTCTCTTCGCCCTCGTCAGCCCCGCACCCCACCCACCAGCCTTACCGGCGACAGGTAGCCCCGCCGCCGCGCACCTGCCCTCGCGTCCGCATCGGAGGTTGTGGTAGCTCCCTTTGAAAATGGAGGACGGAAGGCCGGTGTGGGCCCCGCACCCCACAGAGGGGTTTCAGATGGGCAACATCGTGGATATTGGCCCCGACAGCTTAACCATTGAGCCCCTGGGCCAAAAAGGCAAGACATTTTTGGCACTCATAAACCAAGTGTTTCCTGCAGAAGAGGACAGTAAAAAAGATGTGGAAGATAACTGTTCATTAATGTATTTAAATGAAGCCACACTACTCCATAATATCAAAGTTCGATACAGTAAAGACAGAATTTATACCTATGTGGCCAACATTCTGATTGCAGTGAACCCATACTTTGACATACCTAAAATCTATTCTTCAGATTCAATAAAGTCGTACCAAGGAAAATCTCTTGGGACGATGCCACCCCATGTGTTTGCAATCGCTGATAAGGCTTTTCGAGACATGAAGGTGCTCAAGATGAGTCAGTCCATCATTGTATCTGGAGAATCAGGAGCTGGCAAAACGGAAAATACAAAATTTGTTCTAAGGTATCTGACTGAATCCTATGGATCCGGTCAAGACATTGATGATAGAATTGTTGAAGCTAACCCACTCTTAGAAGCTTTTGGAAATGCAAAGACTGTTCGCAACAATAATAGTAGTCGATTTGGGAAATTTGTAGAAATACATTTCAATGAAAAGAGTTCAGTTGTTGGAGGATTTGTTTCACATTATCTTCTAGAGAAATCTAGGATCTGTGTTCAAGGCAAAGAGGAAAGGAATTATCATATCTTTTATAGGTTATGTGCTGGTGCTTCTGAAGATATTAGGGAAAGACTTCATTTGAGCTCTCCAGATAATTTTCGGTATTTAAACCGAGGCTGCACTAGATACTTTGCTAACAAAGAAACTGACAAACAGATTTTACAGAACCGAAAAACTCCTGAGCATCTTAAGGCAGGTTCCTTGAAAGATCCTTTGTTGGATGACCATGGAGATTTTGTTAGAATGTGCACAGCCATGAAAAAGATTGGCTTGGATGATGAAGAAAAGCTTGATCTGTTCCGGGTAGTAGCTGGGGTCCTGCACCTTGGGAATATTGATTTTGAGGAAGCTGGCAGCACTTCAGGTGGTTGTAATCTGAAGAATAAATCTACTCAGTCATTGGAATATTGTGCTGAATTACTGGGTCTGGATCAAGATGATCTTCGTGTAAGTTTAACTACAAGAGTCATGCTGACAACAGCAGGGGGCACCAAAGGAACAGTGATAAAGGTACCCCTGAAAGTGGAACAGGCAAACAATGCCCGGGATGCCCTGGCAAAGACCGTCTATAGCCATCTTTTTGATCATGTGGTCAACAGAGTGAACCAGTGTTTTCCTTTTGAAACATCATCCTATTTTATTGGAGTCCTGGATATTGCTGGGTTTGAGTACTTTGAACATAACAGTTTTGAACAATTTTGTATCAACTATTGCAATGAGAAGCTTCAACAATTTTTTAATGAAAGGATTCTGAAGGAGGAACAAGAACTCTATCAAAAGGAAGGTTTAGGTGTGAATGAAGTGCATTATGTGGATAATCAGGACTGTATAGATTTAATTGAAGCAAAATTAATGGGAATATTAGATATTTTGGATGAAGAAAATCGCCTTCCCCAGCCAAGTGATCAGCACTTCACATCTGCAGTTCACCAGAAGCACAAAGACCATTTCCGACTCTCTATTCCTAGAAAGTCTAAGCTGGCAGTTCACAGGAACATCCGAGATGACGAAGGCTTCATCGTCCGGCATTTTGCCGGGGCAGTGTGCTATGAAACAACGCAGTTTGTGGAAAAAAATAATGACGCCTTACATATGTCTCTTGAGTCCTTAATATGTGAATCCAGGGATAAATTTATCCGGGAATTATTTGAGTCATCCACAAATAACAACAAAGACACCAAACAAAAAGCGGGAAAACTTAGCTTCATCAGTGTGGGAAACAAGTTTAAGACACAGTTAAATTTGCTTCTGGATAAACTTCGAAGTACAGGAGCAAGCTTTATTCGCTGTATCAAGCCTAATTTAAAGATGACAAGCCATGACTTTGAAGGAGCTCAAATTCTGTCTCAGCTTCAGTGTTCAGGTATGGTGTCTGTCTTGGACTTGATGCAAGGTGGTTTCCCATCACGAGCTTCATTTCACGAACTCTACAACATGTATAAAAAGTATATGCCAGATAAACTTGCAAGATTAGATCCAAGACTATTTTGTAAGGCTCTTTTTAAAGCTTTGGGCTTAAATGAAGTTGACTACAAGTTTGGGTTAACTAAAGTATTTTTTAGACCTGGCAAGTTTGCAGAATTTGATCAGATTATGAAGTCTGACCCTGACCACTTAGCACAGCTGGTGAAGAGGGTCAACCACTGGCTAATCTGCAGTCGCTGGAAGAAGGTCCAGTGGTGCTCGCTGTCCGTCATCAAATTGAAAAACAAAATAAAATATCGAGCTGAAGCCTGCATTAAAATGCAGAAAACTATTCGAATGTGGCTTTGCAAAAGGAGACACAAACCTCGCATTGATGGCCTGGTCAAGGTGGGCACACTGAAAAAACGGCTCGATAAATTTAATGAAGTAGTAAGTGCATTGAAAGATGGAAAAGCAGAGATGAATAAACAGGTCAAGGACCTTGAAATTTCTATTGATGCTTTAATGGCCAAAATTAAGTCCACGATGATGACAAGGGAACAAATACAGAAAGAATATGATGCTCTAGTTAAAAGCTCAGAGGTCCTTCTCAGCGCATTACAGAAAAAAAAGCAGCAGGAAGAAGAAGCGGAAAGGCTGAGGCGCATTCAAGAAGAAATGGAAAAAGAAAGAAAAAGACGTGAAGAAGATGAGCAGCGTCGAAGAAAGGAGGAGGAGGAAAGGCGGATGAAACTTGAGATGGAAGCAAAGAGAAAACAAGAAGAAGAAGAAAGAAAGAAAAGGGAAGATGATGAAAAACGTATTCAGGCAGAGGTGGAGGCGCAGCTGGCCCGGCAGCGGGAGGAGGAGTCCCAGCAGCAGGCAGTTCTGGAGCAGGAGCGCCGGGACCGAGAGCTGGCGCTACGTATCGCCCGGAGCGAGGCCGAGCTCATCATCGACGAGGCACAGGCCGACCCTGCGGCGCTGCGCAGAGGCCCTGCTGTACAAGCCACGAAGGCGGCTGCTGGTACCAAGAAACACGATCTTAGTAAGTGGAAATACGCAGAACTCCGTGATACCATCAATACTTCTTGTGATATTGAGCTCCTGGCAGCTTGCAGAGAAGAATTTCATAGGCGACTAAAAGTGTATCATGCTTGGAAATCCAAGAACAAGAAGAGAAATACCGAAACAGAACAGCGTGCTCCAAAGTCTGTCACTGATTATGCTCAGCAGAACCCGGCAGCCCAGCTTCCTGCCAGGCAGCAGGAGATCGAGATGAACCGACAGCAGCGTTTCTTCCGCATCCCATTTATCCGCCCCGCTGACCAGTACAAAGACCCGCAGAATAAGAAGAAAGGCTGGTGGTATGCCCATTTTGATGGGCCGTGGATCGCCCGGCAGATGGAGCTTCATCCTGACAAGCCACCCATTCTCCTCGTGGCTGGGAAGGATGACATGGAGATGTGTGAGCTGAATCTTGAAGAGACAGGCCTGACTCGAAAGCGCGGTGCTGAGATTCTGCCAAGACAGTTCGAAGAAATCTGGGAGCGCTGTGGAGGCATCCAGTATCTCCAGAGTGCAATCGAGAGCAGGCAGGCCAGACCCACGTATGCCACGGCCATGCTGCAGAATCTGTTAAAGTAGAAGGTGCACTAACCTTGCAGCTGGGAGGCCTTGCCATGTAGGGAGTGTGCCCCAGAGATTAAACCCTTCCACGATCAAGTTAGGATTACTTACACAAGTGAACAGATTTTACTAATCATGGGTTTTTGTTAATTTAAGGTTAATTATGGTAGTGACTTTGGGACCAAAAAATTGTTTTCCTGTATCCAGCTATAACTGTTAGACCTCTCGTCAGTGTGATACTTGTTACACTTGGACAGACTCTGACGTCTCTCTTTCTTTGCCAACAGACTACCTTATATCCATTTTAATTGTTCGCTAGGAAAAGAAGTTTTTTTTAAAAAAATGCAGAATTCTTGCTTTTTAAGGAGGCCGCAGTACCGTAAAACTGGAATAAAGAAAACTTAACTTCAATTTTCTTACGAAAATCAAGGCACTTAGAATGATCAAGGCACTGGTGTTTTTTCTCTGAAAGCTGTATCCTTCCTGTACTCACTTTTTCAGAAATTCATGGAAATTTCCATCAAAGGTGGAAATATTTTCCCCTCCTGTTCTGCAACGTCTTAGTTTGAGTAAAGCAATTTACCTGAAGTTCTAGAATTCTGGAGAGAGCCTTGATGTGTCTGATACGATCTTTGATAGAGAAGGTACATAGTATTCTGCACAGATTGTTTTGCTTTTCTATCACATTGTGTTGCTATAAGAATATGTTCTTATACTCCATGAACAAATAAAGGAAATTTGGATCATTTAAATGCTTGAAAGTTTTGAGATAACTTTTGTTTCACTTAGAAAAAGAAAGTTTTAGGTGGCAGTTTGGCTTAACTGACTGAATTCAGATATTTCAGTTTCATCTCAGTTGCAATTTTATATCAGAATCTTGTCCAAGTTGTTTCATGTGATTTTAATCTAGTGTTCTACTTCAAAACACTCCTGTTTTTTTAAAAAAATTCCTATTGTCTTTTTTGGCCTTTGAGATTCTGGTAATTGTAGAGCTCTTTTATAAGCTTTGTAATTCAAAAACCCTATACTTAGAAATCGCTTGTTTCATGTAACTGATAATTTAAAAAAATGTTTTTGTTTGTGTGCTGTTTAGTTTTGATCAAATGTCAGCAGTTTCAAGCCTAATATTTCTAACTTTCATATTAGGAATTTGGAAACAGAAATACATCAAGGAGTTATGTTGATATAGTTCTAAGGAGTCTTGTTTGTATTTTAGAATAAAATTAGAAAATAAAATTATTCTCTGTACCTTTTTTCCCTGATGTTCAAAGACTCTAAACCTTTGAAATGAATTTCCAGTAATTTTTTTTTTCTCTTAGAGAGAGCCATCTCAGTTAGGAAGGTATTTCCCAGCTGACTAGATTAGAGCTTGTGAGCCAGACACTGTTTTCAGAATTGCTTCTCTCATAATATGTCTTAGTGTAGAGATATTTATTTATTATGACACTGTGCAAATGATGGTCTTCTGTTAAAGAAATTAAGTGGTCCTGTCTGTCCTGTTGAGAACGTCGATGTGATCATCCTTTGAAAGCTGTATTACCGCGTAGACTCACCCACCCCTGGGTCATGCGGTCCCTCTGTGATTTGGTGACAGGCGGTCTGGTTACTGACAATAAATGTCCTCTTCTTCCTCTTCTTATCACTTGGCTTTAACTGGTGTTTTTATTTGTACAGGATAGTGAATAGAAAGCTTTTTTTCTTAACTGGTAGCAAGTAGAGTGCTGGAAGAAAATTTAGTAACCAAATAGATTTTTAATGCCTTGTGCTTTTAGTACTGTTTCCAGAAACAGTTTTATGTGCGTCCGAGATCCATGCAGGCACTTGATGGAAAGCTAGTCACACAGGTTAAATTATGGAAACAGAGAACTTAAAGCTGTGAAGAATTTGTGGGAAATGTATCACGGTCCGTGTCCATATCAAGCACAGGCCTGAACCTAGTGCTCTGAGTGCAGTTTAGTTCTGTTTTTACAGCTCAAATCCTGTCCGGATCAAGTTTCTTTGGAATGATGCCACACATCATTATCTAGGCATTGGAAATCTTTAGTTGCTGTAAGCGTTTATGAAATGGGCCTGACCTTTATGCTCTTTGAATCACTGAAGGGTACAGAAAAAAGTTTAGCTAAGAAATAATAATTAAGAGTATTTTTTTAAAAAGAAATATATCACAGCAAAGCATTGTTACAGATCTTCATAGTGTTTTACTTTAATAGCTGATAAAATTATCGGCACTCTTAAGCCTGAACTCATTTTATTGCTAATTGTGTTACACAGCTGTCCTGGAACACATCTATTTTAAGTAGTCTCCTGAGTTAGTTCTGACTCCAGGAGACCTGCCCTAGTTCGGATAGCTTCCAGTCACCTCCATAGGACAGCTCCACACACACAGGAGCCCCTTTGCTGGAGAAGCCTCGGACCCTTCACCCTTTGAGGGAAGTAGGGGAGGTGGTGTTCTGAAAAATGTGGGGGCAGCGTCTTACAGTGTTCTCAGTCACACCCAGGAATGCCAGATGAAAACCGGATGAATCAAATGCAGATTTAAATTTTAATCAGTCATTTTAATTGGGATATAAAATTGGAAGTTCAAACCAGCATACTCTACATTAAGAGCCAATTCTTCTTCTTTTTTTTAATTTTATTTTATTTTTAAACTTTACAATATTGTATTACTTGCTCAATACCAGTTCCTTCCTTAGCATATGCTTTGTAAGGGTAGACGTCCATAAAATATTAAAACTGAGAAAACAGAAAGTTTTCACATTCTACTATAATGGAATTCCTAATTCATTAACACATTTAAGATACATATTGTGAGCTATGGGTAGGTTCCAAGAAAAAGTTTCTCTAATACTCAGATGTTAAGAGACAAGTGAGTTTTCTTGGTTGTAAGGTTGAGTAGATGGCACCGTCTCGAAGGATAACATGAGGAAGAAGTAAAAGAGTACACAAAAAACATTCTACTGTAACTTACTTTCTGCTTCCTCTAGTGACTTTTTGTAGGTCATTCTTTCCAGTAACATAGTGAACCCTTTTGTAGACAGCGAAACAAAAGATCATATCAGATCACAAAAGAATATAGCATCTTACGCGGAACGCAAGTGGTATTTGTGAAAACTTAGAGAATAGAAACTCACAGGCTCAAAGAATAATGAGGATATTGTAGTTTTATTAATTGGATTTTTAAAAAGCTATTTTCATTCACAGGTTATTGCAATGGTTCTCAGGGGATCCAAATAGGTAGATCTTTGGTTTCTTCACCTGAACCACCTTGAGAGTACTGGATCAATAGAATAAATAGTATTGGATGAATCAGTCAGTGAATTATTACAGTGTTAGTGGTAGACTTGACTGCTTTTATGTAAGAGGTTAACAGGGATCCAGACAGCTTGAGTAATTGAGTTCTAGACCGTGAAAGAGAGAGAAATGCCTTCACTCCACTCATGGAGCATGGGATCAAAGCAAGCAGACTTCTTCGAGTAACCCCTGGGGGTTTACAGAGGGTTGCTCCTCTGTCACCCCCAATCTTCAGAAGGGGTGGCAGCTTTTACCTTTGTAGCATAGCCAGCAGTAACAATTACTGAGTGTTTTTATTTCTCCTAGAAGATAAACTAACAAGGGAGGGGAGGGCAGAGGATACCTAAAAATTACAATAACGACAAGCAGGGGCAGGGGTCAGGGGCAGCGGTAACAGTAAGGAGAGAGAAGAGTGGATGGAGAGAAAGAATAGAGATGCATCCTGAAGAGCTGCTTGCCAGGCGGAAAGCACTGATGTGGTGTAGGGGGCTGGGTGCTCCTAGATCCTCCCCAAGTTTTAGAATGAATTGTATGCAATATAAGAGCAGAACCCATGGACCTATTGAGCCTGGACCGAGACAGGCCTGGTGTATACATTCTTAGCATATAGAAATGGCATGCTGGGGAAGGCCAGTAGACATTCTGTGCATAAGCCTTGTGGAAGGATGAAATAGAAATCCTTTGAGAGGTCAAGCCTACCCATTCCTGGACCAGATCTGGAGGACAGTGAAGTTCAAGTCAAATCAGTGTAGTCTTCCTTGCCCATGACTAGCCTAATGTATGTCATAGTCTTCAACAGGAGATAACCAGGAAAAAGTTCACATCAAAAAGAAAATCTTCAATGCTAATTTTTACCTGTACCAGACTCACCTTCAGATCCAAGTAGGTGTATTACTTGGCTGTTTTCTTTTCATTTTGAAAATTCAATGAATTATATCTGTTACTTAATTTTTCCTTATTTCCTAAAGATGTGTATCTGACACTGTCCTAAAATACTGATGTACTGGAAATACAAATAATAAATGCTTTCTATGTAGAACTTCC EMBV3_14212 CAGGCACTTTGAATGGATTTCAGGTGTCAGGTGTCTCCAGGGTCCTCAGACCACACTTGG Gene BVT0102_244416 + 0 NULL GK000030.2:58555256-58613666 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247086 TCONS_00247087 1 XLOC_151222 NonCoding TCONS_00247087 XLOC_151222 NonCoding NonCoding - X:58569914-58598774 - TSS185121 745 1 TCONS_00247087_1 55 0.335570469798658 3 0.974288783395128 0.000292064991559576 0.00124087838363258 0.000583809649023899 6.60143356031159e-05 7.9525009175494e-05 0 2.34833856823488e-05 0.000289780542492346 0.000653235654027434 0 0 0 0.000123234765965403 0 1.2833397044267e-09 0 0 0 0.000154006373980601 3.07667570319736e-09 0.000884231118660526 0 0 0 0.00132989525926858 3.15415747232973e-09 0.000550524821777004 0 0 0 XM_005227882.1 MCART6 PREDICTED: Bos taurus mitochondrial carrier triple repeat 6 (MCART6), transcript variant X1, mRNA. 0.0 735 100.00 0.54496644295302 NM_001252079.1 USP15 Homo sapiens ubiquitin specific peptidase 15 (USP15), transcript 2e-08 64.4 79.01 0.104697986577181 0 noncoding 1 1 1 1 0.0730929367089918 0.50121862397446 0.0200203571171313 0.743372113345188 GCAGAGGAGGCGGAAGTTTGTAACACTTGTTTTGGGCTGAAGGTGTAGGCACGTCCTGGCCTCCAGTCGCGCTGGAACAGGGGAACCGCAGTGAAAGGGGGTGAGGAGTCGGGGGAACTGACAGCCTGACGGACCCGGCGGCGAGAAGTGATGACAAGGGTGTCGGAAGAGGGGCTATGAGCAATCATTTAAGAACTTTCATCACCCTGTTAGAGAGACCACATGGAGAGATTTCAAGACAACATGGACAGAGCATGAAGCCTAGCTGCACCCAGCATTCCAGAAATCTCTACCAAGGCACCAGCCATAAAGGAAACCATCCTGGCTCCACCAGATCAACTTAGCCACCAGTTGGACATCACTAGGTGACTCCAGTAAATGCCATATGGAGCAGGAAAATTGTCCATATGTGTCTCCAGCACAGTGATTCTCCAAGTGTGGTCTGAGGACCCTGGAGACACCTGACACCTGAAATCCATTCAAAGTGCCTGGGAACTCGTCCTTTTTCCCACTACATATCTCCATAAGGTTAAATTTTCTTCATATATGTCAAACAAAATAACCACAACGATACCACAGTGATGAAGCAAGTAAGAGTCTAGCTGTCTTATATTAAGGCAAACATTACAGAGCTTTTCAAAAAAGAAAACATTTCTAAATTTTTTTTTATTTTGGAAAATAGTTATTTTAATAAAATGTATTGTTTATGTTAACATGTAGTGGATTTATTGTTATTTTAATGAAT TCONS_00244502 r 3' 14660 TCONS_00244503 r 5' 14649 EMBV3_36050 GTATCATTCCTGACCATGACCCTGCACCAAGGTGGGAGCACTCGGATGTATGAACTGACA Gene GeneID:287025|GPLD1:NM_174816:32_cdna Constitutive 0 NULL GeneID:287025 23 GENE GPLD1 NULL glycosylphosphatidylinositol specific phospholipase D1 EMBV3_01705 TGGGCGCCTCTACAACTACGGCGTTTACACCAAAGTCAGCCGTTACCTTGACTGGATCTA Gene GeneID:281428|PROC:NM_001166512:9_cdna Constitutive 0 NULL GeneID:281428 2 GENE PROC NULL protein C (inactivator of coagulation factors Va and VIIIa) EMBV3_43679 AAAACAAACACTTGTCACCCAAACGGCTGAGCACAGGTATCCTCATGTACACCCTGGCGT Gene GeneID:414349|ST8SIA3:NM_001001599:32_cdna Constitutive 0 NULL GeneID:414349 24 GENE ST8SIA3 siat8C ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 EMBV3_12764 AAAGGCCTGTTGTCCCTTCATCGAGATCTAGGTTTGCCTTCTCTGTGTCTGTGCTGGACC Gene GeneID:521083|IPPK:XM_002689838:3_cdna Constitutive 0 NULL GeneID:521083 8 GENE IPPK NULL inositol 1,3,4,5,6-pentakisphosphate 2-kinase EMBV3_32905 AAACCAACCCACATAATCTCTTTGGACCATTGCGCATAGATGTACACGCCCACCAACTTG Gene GeneID:540485|GRM1:XM_002690301:6_cdna UTR3_Alt 2 NULL GeneID:540485 9 GENE GRM1 NULL glutamate receptor, metabotropic 1 EMBV3_13537 ACAGTACAACATTTACAATGTTGGCTCAAGATCGGCTTTACCAGTGCACCTGGACAGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11922 AGCTGTACCCCACAGTAATGCGGCAGAGAGGTGTGAATGTGACAAACTGCTTGGCGAACA Gene GeneID:519202|LOC519202:XM_002699319:338_cdna Constitutive 0 NULL GeneID:519202 29 GENE LOC519202 NULL similar to organic anion transporter 1 EMBV3_30563 TGGTCGTTTTTTGGAGTTCTCCTGCTCTGTGTTGATGACCCTACTGCCCCCACAATCTGC Gene BVT0102_002151 - 1 EMBV3_15009 GK000023.2:10240613-10282755 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30598 GAGCTGTTTGCCTCTGACCATCTCAGGGACCCACTTCTTAATCCTAACTTGGTGAAAAAC Gene GeneID:534513|CCDC66:XM_002697061:553_cdna Constitutive 0 NULL GeneID:534513 22 GENE CCDC66 NULL coiled-coil domain containing 66 EMBV3_19538 TCTTGTCTTCTCTCATCCTCCTGACCTCACTGCTCATCACCACCGTGTCCTACACCTACA Gene GeneID:513770|LOC513770:XM_002699109:149_cdna Constitutive 0 NULL GeneID:513770 29 GENE LOC513770 NULL similar to Olfactory receptor 6M1 (Olfactory receptor OR11-271) EMBV3_13060 CAGTCTGAGATTCAAAACAGATTCTTCCTTGAAAAGCACAACTGTTTCCCATCCTCCTAA Gene BVT0102_262882 - 1 EMBV3_14395 GK000004.2:22145008-22333432 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183356 TCONS_00183359 TCONS_00183358 TCONS_00183360 TCONS_00183354 TCONS_00183355 TCONS_00183357 1 XLOC_111137 Coding TCONS_00183355 XLOC_111137 Coding Coding DGKB 4:22330396-22811618 j TSS136847 4968 1 TCONS_00183355_4 203 0.0666264090177134 7 0.989690807342157 0.000911186292212455 0.000585871668007425 0.000921580118319211 0.000207767337740492 9.14323026781783e-06 3.17019621582581e-05 0.000222321302257128 0.000969921929068511 0.000106450520124939 4.40389761475866e-05 2.35977307264258e-27 1.12230807310629e-30 1.01709490352112e-25 0.000657645819487353 1.69609336954226e-07 2.86297635077896e-14 0 1.14409026012583e-18 2.04353965007418e-07 0.000739807490930025 0.000370257369190991 0 0 2.50651642061229e-09 0.00096108392817519 0.000695820021210116 0.000863075522704879 1.31839149485947e-05 3.4589179206801e-46 1.2458778500339e-05 XM_005205199.1 DGKB PREDICTED: Bos taurus diacylglycerol kinase, beta 90kDa (DGKB), 0.0 7488 100.00 0.835547504025765 XM_005249628.1 DGKB PREDICTED: Homo sapiens diacylglycerol kinase, beta 90kDa (DGKB), 0.0 3759 80.74 0.800322061191626 TCONS_00183355_4 sp|Q9Y6T7|DGKB_HUMAN DGKB_HUMAN Diacylglycerol kinase beta; 5e-139 412 98.03 0.995073891625616 1 coding 1 1 1 1 -0.0631020423147505 0.743158002758705 0.00335586210841066 0.949861492233125 CTGAAGTTAGCCTGCCATCTGGAGATGCTCACCTGCTCTCTGCTTGCTGTCCCACGTGGGACGCACGTACGGCATGCAGCACGCACAGGGCACGTGCACGGAGTGCCAGCCAGGAGGTGGGGAGGAAGGAGGCCCACAAACCTGTGCGGGCACCAGGTGGGTCAGTTGCCTGCTAAAATCATCAGTGTAGGCTTCCAGAAGCAGCTCAGGGGCCATGCTCCTGGAGGAATCTCTGCGTTGATCTGTAGGCTCCATCGCCCCTCAGATCAGATCAGATCAGATCAGTCGCTCAAAATGCCCCAGTGACTGTGAGGCCTTCTCTCTCCTACCTGCTCCCAGCCTCTGCCACCCACTCCCCACCAAACTGGTGTTGAGACCCTCTGTGCTCCAAGTGAGATGAGAAAGAAGTGGCCTCTGCGGCAGCATCCTGCGAGGCACAGGAAGCTAAACACTCCATCCCGATGCTGAGGGAAATCTGGGACTGAATGGAGCCTTTTCTGCAACTGAGCTGGGCCACGCTGGGGGAGTGGCCATGCCAGTAAAGGAAAAGTGTTCTAACCCCCTTCAGTGGATCTGTTCTTGGATATTTTGCTGTGCTGGAACTTCTCCGCTGGACTCCCTGACTCGGCGAAGGATGCTTCCATTGCACACAGATTCCATATCATGAGAGAGAAACACCCAGAAAAATTCAATAGTAGAATGAAGAACAAATTTTGGTATTTTGAGTTTGGCACATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTACATGAATCTGTAGAAATAGAATGTGATGGAGTACAGATTGACTTAATAAACATCTCTCTGGAAGGAATTGCTATTTTGAATATACCCAGCATGCATGGAGGGTCCAATCTTTGGGGAGAGTCTAAGAAAAGACGAAGCCATCGCCGAATAGAGAAAAAAGGGTCTGACAAAAGGACCACGCTCATAGATGCCAAAGAGTTGAAGTTTGCAAGTCAAGATCTGAGTGATCAGCTGCTGGAGGTGGTTGGCTTGGAAGGAGCCATGGAGATGGGGCAAATATACACAGGACTGAAAAGTGCTGGGCGGCGGCTGGCTCAGTGCTCCTCTGTTGTCATCAGGACCAGCAAGTCTCTGCCAATGCAGATTGATGGGGAACCATGGATGCAGACCCCATGCACTATAAAAATTATACACAAGAACCAAGCCCCAATGCTGATGGGTCCTCCTCCCAAAACCGGGTTGTTCTGCTCCCTCGTCAAAAGAACCAGAAACCGAAGCAAGGAATAATCCCGTATCATTCCACTGTTGGCACTGTTATTAGCATAATTGGGCCATAGAACACTTATGCTGGAAACCTTTGAACAAGTTCAAGTCTCCTGCTCATGTAACATCATGGAATCGGTTTGACAGTTTTTGTGACTGAGTTAATGTAAAATTCAGCTAATAGGAAATTTATTGTCTCAGTTTTCATGGGCATCTTTGCATGAAGAAAGCGGAAGTTTACATGAAGTGATATTGCATATTTTTGTTGCATGCATTCCCATAGATTTTTATGTCTCCTATCCATTCCTTCACCAATTTCCACGTACTAACCTGTAAGAAAAGTCTGTACAATAACAACAAAAAAAGGAAATGTCACAGAAAATGTGATTCCAGTTATTAATAAGCACTACTTAATAATGCTTCAGTGATCATAATTGCAGATTGCTATACTTTTCCCTTTAAGAATCAAACAGCATATCAATGATCTTTGACCTATGACTTGAGGAGCAACTTTTAATTGAAAGGTTTATTAAATAGTTGTCTATTTGCTGTATCTAAATAGTTTTCCTTTGACTTCTTGATGCTTCTGAGTGGAATTTATTAATATGCTTCTGAGTGGAATTTATTAATAAAATATCAGGTGTAAAATTTTCTTGTGCTGAGAAGTAGGAAGTGGTTTTATTTTGTTTAGTTTTGTTTTTAATTCTACACATAAGTGAAATCATGGTACTTGGCAGTAAAGTGTGTTAATATGGCAAGCTTTATTCCCTTCTGCATGTGAATCTAGAAGAAAATTCTTAATCACAACAGTAACCAAATAGATGTTTGAAACTATGTGCCTAAGTGTATTTCCCACCAAAGATTCAGAAAAAGATGCTTGAGAGAAATGGGTTATGCATAATTAATTAAGCATCATGAAGAAAATTTATGGTTCTAATGATTAATTTTGTGATGGCTAAAACTCTGGAAGAGAAGGGATTACCCATTAATTATAATTAAAAATCTCCTTTCACAGACAATAAGCTATGCAACACAATCAAAGCTCAATAGCTAATTTCTTGCTTTTTTGGTCATTTGTGAGTATAGGTGTCTATAATTTTGAATGGGTCAGCTAAGTACACTTGCGAAAGTAAATGATTGTATCATTTCCTTTCGAGTATAAATTGATCCCTGTAATAATATTGAGCTCTTTGAAGTCAATCATGCATGCAGTTGGCACCCTCCCTTTTCAACTCCTGCACTCCCATCTCCATGACTTTTCAAATATTTATTTGGAAATAATGCCCTAGATTGTTATTAAAGTTTTTCATGGCATGGCTGAATTCTCTGATTGTTTGAAGAAATTATGGAATAGTATTTTTAAGTGTTTCATTTAAACCTATGATATAAAATTAAATGCTTGTTCTGAGCAGTTTTGGTATTGTTCATTCATATTGAGCTGCATCTCCTCGTTGCATGTTTTATGTTTTTAAACATGCCATAAGGAAAACAAGTGCTTGAAATGCATGATTTATTAGTTTCTCTCTCCATTCTGCATTAAAGTACTAATGATTTTCAGTTCTGTTTTTCTATTGATTCATTCATCTTTGAATTACAGATAGCATTTAGTGATTCTTGAACATAATCCTGTACATGGACTTATGGATTTCAAATTAAATTGCTATAATTTTTGTTCTTTGATTGGAAGACTCAACTGAATGTTGTTATAGCAAATAACTACTCTCCAGCAATGTGCTATCCTGGAAGATTATGTCTAAAGCATTTTCTTTTAGTGTTTCAGGAACATTGGATGGTAAATATAAATCAACAAAAGTTTAATTGCTTTAAAAATAAAAGCTTTTGAATAAATTAAGACATTATTTAGCATTCTCAGGAAAATTATCATTATAGTTGCAAATGTAGCACAGCAATCACTTGCCCTAGTATAATAAAAGTTATTTGGCAGAGCAGCCATCTAGACCAGAAGAAATCTCAAAGCAGTAACAAATGCATTACTGACATAATGTTACATAACACACACATTGATTTTTGTGTATCTATGGTTACAGGTAATAAATATTTTCACACAGACTGACAACATTTTCTGTAATGGGCCGGCAGGCTTTGTGTCAGAAACATACTCTGAAGGCACAAATTATTTTGTGTTCAGGACAGCATACAATTATTCCCTGGCTACCTTTCATAGTTTGAAGGCAGCACCAGTTTGTGAATCAGTTTTAACAATCTGTGCACTGAAGAGCTGTTGAATAGACAGTGAGATGAGAGAAATCAAGCAACCTGCTTAAGACCACAATAGTTGAAATACTGGGCTGTAGCTTTCCTTCAATGTAGCTATGTAGTTATAATTAGTAACAATTGTAGTTACATCTTCAGTCAGTGGGATTCATTGGTACCAATCATAAATGTTCAAACAGGAATCGAACTTTCCTCTCCCCAGCTCACTTTGCGAAGATACTGATGAGCTTGCCCTTCAAGAACACTACTCTAGGGGTTTGGAAAGTGATTTTTAAAAACTACTTTGATAGTTTTGAAATCAGAGAAGATATTCTCACCATTTTCTGACAGCTTCAAGTGAAGAATATGTATTTTAAGAAACATTCCAAACTGAAAGCTCTGTGGTATATAGAAATATTAAATACAGTTAGCTTTGTAAGGTGGAAACTTTTCTTATATGTGTGTGGGTCAACGTTTGCATTGTTGAGTCAACCTTTTCTAAATACGGTAGATATAGTTGTATAAGGTTTTAAATGGATGAAGCTCTTGAGTAAATATCATACTGGGATTTCTGGGTTCAGAGGAAAATGGGAAAAGAGATATGTACTTTGCTGAGTATTGCCATACACTGAGTAGATAAATAGAAATTCCAAAATAAAGCTGGATATCTATGCTGCTAACAGGAAAGAAGGTGTCTGTGTAGAATGGAGAATTTTAAAGGACATAAATGTATTCCTCTACTTATGTGTGTATACCATGTATATCTGATGCTGTTAAATTTATTGTGGAAGGAAAATATATCTGGGAGGAAGTAAAGAAAATAGAATTTTAAAAGAGTTTTTATTTTTAAACAGATTGTGTGATTATAGCCAGAATAAAGCAAAAGACTCAGATATTTAGTGTATTCTACTGCAGGGGGAAATTTAACTCCAGTGAGAATTATTGAATGAGATATATATGTTTTTTTTTCGCATTTTGTTCTTTTTTCCTTATTTAGGAGGATGGGAAACAGTTGTGCTTTTCAAGGAAGAATCTGTTTTGAATCTCAGACTGTATTCTACTTGAATAAGACAAAACTTTCAAACAGCCCCATTCCTTTATGTGTCAGAAGTTTGTTTCTCATTGGTTATAAAAAGGAAAATGTTCCTCTCTTGGCACATATTAGCCCAAAGACCTATTCAAATAGAGTACATATATTCTAAATGAAAATATTAAGCCCTTGTAATATATGTTGAGGATGTAAAATTTAAATAAATAAATAAACAAGCAAAAATTTGCCAAGGAGCTTTTATTTGGGGAAATGCAGAAATCACCCCCTAAGTCTCTCAATGAAAGTGCATTCTATTTAAATAAAGTTTGAATAAAATCACATTTAAAGGATTCTCTATATCCTCATTGTGTTTAAAAACATGGAATTCATTCATTTCATTATGCTATCTTATTTTCTCAGAAAGTGTTATTATATATAGTATTCTGCTTTTTGAAATAAAAATGTTAACACTC EMBV3_08035 TGTGCAGGCCATCACCTAGCGATGGATAAAACCAAGTGACAGGAGGATTGTGGCTAACAG Gene GeneID:788087|MCL1:NM_001099206:181_cdna Constitutive 2 NULL GeneID:788087 3 GENE MCL1 MGC143362 myeloid cell leukemia sequence 1 (BCL2-related) EMBV3_38968 TCTTCTAAGAGGGAAGGAACCATAAGGGCATTCTAAAGGTACCAAATGAGGCCAAAGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24792 TGAGACCTCGGGCTACAACACGGGACCCGGGCGCTGCTCCGACCCCTCGTGTCTTGTGTT Gene GeneID:100313010|MIR187:NR_031180:44_cdna Constitutive 0 NULL GeneID:100313010 24 GENE MIR187 bta-mir-187 microRNA mir-187 EMBV3_12229 GCCGCTTCCAGAAAGACATCTGTATAGGGAACCAGTCCAACCCCTGTGTGCCTAACAACA Gene GeneID:537804|GRIN2B:XM_002687763:86_cdna Constitutive 0 NULL GeneID:537804 5 GENE GRIN2B NULL glutamate receptor, ionotropic, N-methyl D-aspartate 2B EMBV3_03989 GTCTCTGTGTAAATAGACCAAATGATTCACTCAGTATATATAACCAGGTACACCAGAGCT Gene GeneID:525931|PDGFD:NM_001083706:14_cdna Constitutive 1 NULL GeneID:525931 15 GENE PDGFD MGC139243 platelet derived growth factor D EMBV3_31205 CCCACCTCCTCCAAGCTGTGACCCTGCTCGGAGCTCTTGTATCTGTGAACCTCCAATAAA Gene GeneID:613464|LOC613464:XM_002699452:183_cdna Constitutive 0 NULL GeneID:613464 29 GENE LOC613464 NULL similar to Interferon-inducible protein EMBV3_31743 GAGATAACTCACTGCCTGCTTACAGATTCAGACCTGACCCATCTATCCCAGAGCCCGAAT Gene GeneID:525101|LOC525101:XM_002694075:291_cdna Constitutive 0 NULL GeneID:525101 16 GENE LOC525101 NULL similar to preferentially expressed antigen in melanoma EMBV3_43587 AATGTGACCCACAAGTTGTGGAAGAAATACATAACATATTTGCCATAAAATCTTGGGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06749 TAGAAACAAGTATAGAGGGGGAAGGAACTGTGATCTTGTAGAAATGGCCCTGCTGCTAGC Gene GeneID:529395|USP3:NM_001102123:82_cdna Constitutive 2 NULL GeneID:529395 10 GENE USP3 MGC142882 ubiquitin specific peptidase 3 EMBV3_16812 AATAGCGATTGATTCCAAGTACAGCAAGGCCTATGGGAGAATGGGGCTGGCCCTCACTGC Gene GeneID:540864|SGTB:XM_002696293:30_cdna Constitutive 0 NULL GeneID:540864 20 GENE SGTB NULL small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta EMBV3_30253 AGGACGCCGCCCTGAGAGCCAACCTCAAGATGAAGCGCGGAGGCCCCCCACCCGATGGCT Gene GeneID:617340|EMID2:XM_002698200:749_cdna Constitutive 0 NULL GeneID:617340 25 GENE EMID2 NULL EMI domain containing 2 EMBV3_06018 TACTGGTGTTCTTTAGATTACGGTCCTGGGGCACCCAGAGTCAGTGCCTTCAGGTTTGAA Gene BVT0102_156456 - 1 EMBV3_38105 GK000013.2:43240718-43244943 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23227 ATGCTTTCTCCTCACCTCTCCGGGATTTCTGCAGGGAACATTCTGCAGTCAGCCAGCAAA Gene BVT0102_076743 - 1 EMBV3_15038 GK000029.2:41175173-41298478 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06698 AGGGAAAAGGTGGCTTCCCTATTCAACTTCAGCGCTTGCCATGATCACGAAGCTTGTTCC Gene GeneID:506087|ENTPD3:NM_001017935:53_cdna Constitutive 0 NULL GeneID:506087 22 GENE ENTPD3 NULL ectonucleoside triphosphate diphosphohydrolase 3 EMBV3_38638 CCTGGGAATGGGTGCATCAGGGCTGAGACTGGATTGTGCTGTGGAGAAAGTCTTAAGGAA Gene GeneID:529905|KLHL25:XM_002696510:103_cdna Constitutive 0 NULL GeneID:529905 21 GENE KLHL25 NULL kelch-like 25 (Drosophila) EMBV3_35559 CAGAGCTGCACCCCTTGCCCCAACTCAAAGATCAGTGCTAACATCTTCCGAACTCTTCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15971 ACCATGACCAAGCCGCTGCAGAACGTGCTTGACCTGGACGGCGACCCTGAGCTTTTCGAG Gene GeneID:789234|NKPD1:NM_001163482:472_cdna Constitutive 0 NULL GeneID:789234 18 GENE NKPD1 NULL NTPase, KAP family P-loop domain containing 1 EMBV3_02850 CTTGAAGAAGGACAGAAAGGAGTGGGCGACGGTAACAGGAAGAAAATTCAGCAGTCTTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10008 TCATCTTGTTTGACCCCTCAGTATAATGTCTGCTCCTTTCTGGTGCTACAACGTCCGCCC Gene BVV0102_238684 + 1 EMBV3_31821 GK000021.2:69436385-69455151 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125573 1 XLOC_077115 NonCoding TCONS_00125573 XLOC_077115 NonCoding NonCoding - 21:69442146-69445158 - TSS94332 3012 1 TCONS_00125573_2 171 0.704847277556441 1 0 0 0 7.68094078443176e-07 0 2.86854699191564e-06 0 2.12977386452389e-05 0 2.6195740100209e-06 0.000147430120531922 4.57911368138966e-05 3.26951113039763e-05 1.9846190880906e-06 7.06658558506686e-06 7.54209309040764e-06 0.00238086007542277 0.00104342749660253 0.00045544635261841 5.95196326112132e-07 0 0 0.000345754149523196 9.03971255837474e-05 0.0004215287444743 2.53031004155396e-05 0 0.00012910109052763 0.000165826351804291 0.000145244859977152 0.000123143333160343 XM_005209638.1 REBK1 PREDICTED: Bos taurus RNA export protein-like protein of BERV-K1 (REBK1), transcript variant X1, mRNA. 0.0 921 81.12 0.328685258964143 NM_003255.4 TIMP2 Homo sapiens TIMP metallopeptidase inhibitor 2 (TIMP2), mRNA. 7e-53 214 86.10 0.0607569721115538 TCONS_00125573_2 sp|P16368|TIMP2_BOVIN TIMP2_BOVIN Metalloproteinase inhibitor 2; 1e-07 50.1 72.73 0.187134502923977 0 noncoding 0 0 0 0 -0.106870911769996 0.347151820840731 -0.00865665939803374 0.887042060272736 NNTTTTCAACATTTAAGAGACCACACCTTCAATCTTTTGATTGGACCCTGATATAGTGTAGGGTTGTTGCCTCATACAGAGACTACTAATTTTCCAAAAACTAAAACTACTATTTTCTCCTTGTTATCTGATTTACAAAAAGAGATTAAACACATAGAGAAAAAATATTCTGTGGGACATATTAGAGCCCATTTTGGCTTGCCCGGCCCTTTACATGAAAAAAATGTTTTGACAGATGCATTGACTAAAATAATTGCTTTAAATTTACATAAAATGATCGACAAGGCCAAAAATTCTCACAAAATTCACCATCAAAATGCAGCTGATTTAAGGTATAAATTTCATATCCCAGCCAGATGTGTTGCTAACTTGTGGGAGAGGGTATGTTGGTATTTTTCCTCAGGACGCAGATTCGCCAATTTGGATCCCGGAGCGGCGCCCCACACCCTCCTCACTGCACCCCGCAACCTAGAGCCGAAAAAGTTTGTGCGGCGAGTGAAGGCCGGAGAAGAGAGCGCACCCGCGAGGTGCCCTCCAGACCAACGCGGCCACGCCGGCGAGAGGGAAATGCCCCGAGCCCAGGCGGCAGCTAGCCGGAGTCCGCGGCCCCCGCTCCTCCGCCCGCCATGGGCGCCGCGGCCCACAGCCTGCCGCGTGTTCTGCCTCCTGCTGCTGGGGACGCTCCTCCCCCGGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCACAACAGGCGTTTTACAATACAGATATAGTGATAGGGCCAAAGCGGTCAGTAAAAAGGAGGTAGACGTAATACAGTAACTTGTAAACGATGTGTGCTTTCATCTTGTTTGACCCCTCAGTATAATGTCTGCTCCTTTCTGGTGCTACAACGTCCGCCCTACCTTACGGTGCCTGTGACTGTGACTTATTGCTATGATAACTATGGTCTTGCTGTGTTGCAACAATTACAAGATTTGATGCGATCACGACGGTTTGTGGGCTTACTTATCTTGAAAATATCAGCTTTAATAACTACAATTACTTCTGTCACTGTGGCAACAATATCATTGACTCAACAAGTACATACTGCTTAATATGTTAATACTGTGCTCTAAAAATGTCTCTTTAACGCTGACAACACAGGAAGTTATAGATAAAAAACTAGAAATAGAGGTAGACGCCCTGGAGGAAGCGGTAATGCATATTGGAACTGAATTACAGACATTAAAAGTAAGGTTGGCACTGTCCTGTCATGCGGACTACCGGTGGATTTGTGTAACACCCCTGAAAGTAAATGAGACAGATTATAACTGGAAAAAAAAATTAGAAACCACGTTTCGGGGGTATAAAACACTTCCAACATTAGTTTAGATTTAGAAAAACTTCACAATCAGATAAAGACCATGGAACACTCCCGATTAGACTTTACTGCCACAGGAACAACAAATGACTTTTTCCATACATTTTCTAACTTTATTTCAAAAAAAACCCCATTCTGTCTACTAATTTAAGCTATGCTGCTGTGGCCGTTCTAATTCTGCTTCTCATAATTATTCTTCCTTGTATTGTCAAAACTCTTCAACAAAACACTCAAAAGCTCGCGACTAAATTACATCTGGCTGTCTTAAAAAATAAAAAAGGGGGAGATGCTGGGAGCCACCACAGGAGATCCCCCCCATGACAAAGGTCATGCGGAGAGAACCTGACAGGCAAAGGCGGATCCGGCCTCAGGGGACCCCCTGAATCTGCTCGAGCATCTACCCCAAAACTGGAATCTGTCTGTCTTACTATTTTGTGCCTTTACCAACTCTTCTGACATTAACAGGGGGCTGTCCTCGACCACCTTTCTCTGGAAAAAGTCAACTTAGGGCTCTAATTAATAAGTCTCCTGGGCATGATAGGAGTGTTTCAATTCAAACCCCTCTGATGGCTTTCTAGCTTGCCTGACAGGTTTATCCATACTCTTGCAATTAACACAAGTAATTGTTCACAACTCCCCAACCTTGAAAGGCATGGGAAGCCAAAACATTCTAAAAGTCCTAATGAGCATAGAGTCCTTTAAGGGATGAAAAATTATTAGAATAGATAGTACTGGTCAAGGGTTTCATTGTTGTGCACCTGGGAGTGCATTGGTTACCATGGTTGGAAGGTAAGAAAAACAAGCAGCAGCCTTGGAATTAACCACATCAGACCTTTGAGCTAACCGGTTCTTTCTTTGTTGTAACTCACTGCACCTTTGCTTCGGGAGAATGTAACTGTTTAGCACTTTCTGAGGTTGACATAGATTAGAAATACAAAGAAAAAACACTTCAAGGGAAAATAAGTTTTCTGGTTGAACAGCTTTATCAAAAAAGGGTCATAAAATGTCCACAGGCCTCCAAGGCCAGAAGATATTGTACACAACATTGTTTATGGGAAAGGTATGCAGAAAAAATCCTGGTTTTGATAAAGACAAAACAGATGTAATGTTTGGGCTGACTCTGTATGACTTTGCATCTTTCATTTCCCTCTATGTACAAGTCAAAGTATAAAAGTTCCTTTTGGAAATAAAGTTAGGGGCCTCGCTCACCGAAGCTTGGTCTCCCTGTGTCATTCTTTTTTTCTTTTCCCCTCCTTTTCTCTCTCTGTTCTTCTTTCAGGATGACTCCTTGGAACACAAGAGCTTTATTGGCTTTCTGTGTTAATCAAGGATCAAGCCTCTTTCTCTTCTCTTTATTCTTTCTCCTTTATTCTCTTATCGGTCGACCCCGGACTATCAGGTTTCAATCCATTGTAAGACCCGTGTCATCTCTCTCTCGCCGATGCCGTCTTTCCTGAGGGTACCCTAGGATGCTGCTGGGGCTGGACCCCGGCACCCAGCCCCTCAAAGAGACCCCTCCTGCAGCCTCGGCCGCAGCCCTGACCGACGGGCCTGGCCCTGCCTGAGCCCCTGGGCTGCAGGCAGAGGCTCCAGGCTGGTTTCTGAGCCAGGCGTAGTCCTTGTTGTTCCGCTTGCTTTCCAGTCAGGAGACTGTAGGCAAGTTTCTTC TCONS_00120209 TCONS_00120208 . 5' 1443 TCONS_00120209 TCONS_00120208 . 5' 1443 EMBV3_17122 ATCGGTCACCAGTGTCCGTTCCCGCACCAGGTTTGGGATGTACATTCCGTTCCTGCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30487 CCGCGGAGTAGGAAACAGCACCCTAGTCCAGTAGTCTTGTCTGGAAAATTTCATGGGTAG Gene BVV0102_375908 + 1 EMBV3_02365 GK000002.2:62479266-62601166 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23983 CTAAGTGGTAGCAAAGATGTGGAGACATCGCCGGTGGGAACATAAAACGGTACCAGTGCT Gene BVT0102_365109 - 1 EMBV3_07758 GK000002.2:130478327-130498485 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104027 1 XLOC_062273 Coding TCONS_00104027 XLOC_062273 Coding Coding LACTBL1 2:130463267-130479463 j TSS77122 3376 1 TCONS_00104027_7 547 0.345082938388626 6 0.791911083667799 0.000439281735282078 0.000345336330907632 0.00069075816651064 0.000209079208407944 3.65607660135486e-05 0.00010345771672619 0.000290202902041312 0.000106287161504317 0.000198655682398776 0 8.80143958348297e-11 0 9.20730772452159e-07 1.75463517599235e-10 4.90474492385453e-06 0 3.32557828632458e-13 0 0.000244269673091318 0.000406861123351375 0.000415434264931475 0 0 0 0.000416612121589829 0.000526949739875914 0.00023052930663657 0 0 4.25636894471916e-11 XM_002685780.2 LACTBL1 PREDICTED: Bos taurus lactamase, beta-like 1 (LACTBL1), mRNA. 0.0 5157 100.00 0.846563981042654 XM_003846622.1 LACTBL1 PREDICTED: Homo sapiens lactamase, beta-like 1 (LACTBL1), mRNA. 0.0 2235 88.59 0.513625592417062 TCONS_00104027_7 sp|A8MY62|BLML_HUMAN BLML_HUMAN Putative beta-lactamase-like 1; 0.0 859 86.65 0.943327239488117 1 coding 0 0 0 0 0.00916272496288523 0.937807896500523 -0.00994545574380796 0.882836527791306 GTGGCATTTCAGCTGGTCTTAGATATCTCGCTAAATACATAGGAGAGAGGGGGCATGCCCAGCAGAGGAAACAGGCGAGGCACAGGCATGGAGGTCTGTGGGGCAGAACTGTCGGAGGGGCCGAACTGGGGAGGTGCTTGGTTTTACAGGTGCGAAACTCACCCCAAGCTGTAGGCTCACCTGATGTCTGGGTGGACCTAAGGTATAGGACTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATAGCTGGATGCTATCACTGACTCAATGGACGTAAGTTTCGGTAGACTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCGCGCTGTGGTTCACAGGGTTGCAAAGAGTCGGACATGACTGAGCAACTGAACTGAACTGAAGGCATAGGAAGGGCCAGGCCGGGGGAGTCCCTCTCTCCTCCCTGTTGCTGACCTCCTGTGTGGGCCTGATTTGCCCTTCCCTTTCCAGGCTGGCCGGCAGCTCAGTCTGCTGAAGGTGAAGAAGAAGTGGCTCTTGCCGGCTTCCTGCAGCTTTTTCTTCGTGCTCTCTGCGCTCATGACTGGCTGCTTCCTTTGGCAGTATTACCTCCCGAAGCTGAAGAGCGGTTCCTTGGGACCAGAGGTGACCTCTGCCCCCGTGAGGATGTGTCCCCAGCACCCTGAGCCTGTGCCCCTGGCCCACCCCCTCCCCGTGTTGAAGGAGGCCCTGGAAAAGGTGGGCCGGATCCTCCGCCAGGCCCTGTCTGCCCCGGGCCTGGCTGCCATGTCTGCAGTTGTCATCCACAATGACACCGTGCTCTGGACTGGGAACTTTGGGAAGAAGAATGGTTCAGACCCAGCTTCTGGGCCCCCCAACGAGTACACCATGTACCGAATCTCCAGTGTCTCCAAGATCTTTCCTGTCCTGATGCTGTACCGCCTATGGGAAGAGGGCATCGTGGCCTCTCTAGATGACCCTCTGGAGCGGTATGCCAGCGCTTTCACCATTAACAACCCATTGGGTATGGCATCAGCCTCCCAACAAAGGAGTCTGGTGGATGGGCTGGAGGAGGTGGGCCCAGCCCCAAGGCCTTCACCCGTCACCCTCCGAAGGATGGCCAGCCAGCTGTCAGGGCTGCCCCGAAGGCTCCGCTCCACTTCGCTGTTGTGGAGGGGCAGCACCCAGGAGGCCCTGAGCCTGCTCAAGGACGATGTGCTGGTGGCGGATCCAGGAACCAGGTGCCACTATAGCACGCTGGCCTTCTCGCTTCTGGCCCACGTCCTGGCAGCCCACACCGTCCAGGGTGACTACCAGCGCTGGATCTTGGAGAAGGTGCTGGAGCCATTGGGAATGGCAGACACGGGCTTCGACCTGACGCCTCCTGTGCGTGCCCGGTTGGCAGTGGGCTTTTATGGCAGTGGGCGGCTGGCACCTCTGTACGACCTGGGCTGGTACCGGCCGTCGGGCCAGATGTACTCCACCACCGCTGACCTGGCCAAGCTGGCCATGGTGCTCCTGGGAGGTGGGCCCCAGCGGCTCCTACGGCCAGACGCGTCCAAGACGCTGCTGGCGCCACTGCTGGCCTGCCCGGGCGCCTACTTCGCCAACGAGACGGGCACGCCATGGGAGTTCCACGCGCAGCGCGGCTACCGCGTGGTGCGCAAGGACGGCGAGCTGGACGGCTACGCTGCCACCTTCTCCCTGGTGCCGCCGCTGCGCCTGGGTCTCACGCTGCTCCTGGCCGGGCCGCGGCCGCCCGGGCCTGACCTCGTGGCGCAGGCCTACGACGTGCTGCTGCCGGCCATGGAGAGGGCCCTGCGGGGGGCCGAGCTCAGCCCGGCGCCGCCGCCCAGCACGCGCCCCTTCACCGGCTACTTCACCTTCTCTAACTTGACCTTCTACGACGTGCGCCCCGGGCCGGCGGGCGAGCTGCGCCTGCGCCAGTTCGGGCCCCGCGTGGAGGCGCTGGTGCCCGCCGCGTTCCGCACGCTCACGCTGCGCCACGTGCGCGGCCGCGTCTTCCAGCTGCACGTGGCCCGCGAGTTCCCGTGCGCCCTGCCGCTCGGCGACTCCTGGCTGTCCCTGGAGGCCCAGCACGGGCAGCTGGTCAACTTCTACCCCTTGGACCGCCACGGGCTGTCCCCGGGCTTCGACGTGCCGGGCCTCAACACGTACAGGGTGTTGCGGCTGTCGCACAAGCCGGTGTTCAAGACCCAGTGACCCTGGACTCCGTTTTCCCTGCTGTTGCCTCCCAGCTGTCCAACCTAGTTTTGCAAAGTAAGGCTGCATGAAGGTTTGCTGGAGAACCTGAGGAGTTGGCAGCGTGGGGTAGGGCAGTGCCCCTCAACGTTGTGGTTCGTGGACCACCGCCGCTCGCCAGCTGTTAAGTTATCCGTGGGAGAGGAAGAGTTAGGTAAGCATTTAGAAACTGTAATAGCGAGTTGACAGAGTACTTTTGTGTGTGTGTGGAATCTGAGACAGAGTATCATTGTATCTTTTAAAAATCAACCTTATAGAGTTATACTTTTATGTAAAAGGAAATGAACACATTACCAGGGCACAGTTTGATTTTGACAGATATGTATACCCTTCCCCACAGTCAAGATAATAGAAAATTTTCATCACTCGCCCAAACATCCCTCCTGCTGCTTTGCAGCCAGCTTCCTTCCCTGCTCCCAGCCCTGGGCAACTACTGATCGACTCTGTCACTTTACATTAGTTTTAGCCTGGAATTTCGTGTAAGTGGAATCGCAGAGGGTACTCTTTCGTGTCTGCCTGCTTTCGCTCAGCAGGATGTGTTCGAGGTTCATTCATGTCTTTGTGTATATCAATATTTTGCTTTTTTCATTGCTGAATGGTGTTGGGTTGTACAGATATGCCACAATTGGTTTATCCTTTCATCTTTCGATGGGTATTTGGGTTGTTTCTAGATTGGGGCTTTATGAAACAGCATTCCTGTATAAGTCTGTTTTTGTGAATACATGGTTTCGTATCTCTTGGGTAAATACCTAGGTGTGACTGCCATGCAGTTTTATAAAGCACTGGTACCGTTTTATGTTCCCACCGGCGATGTCTCCACATCTTTGCTACCACTTAGCACTGTCAGCCTTTTCAGTCTTAGTCACGCTAGTGGTAGTAGCTGTGAAGTCTTCTCTCACCGTAGTTTTAATTGCATTGTATTTATCACATTGTAAAAGTTCTCTAAATGTTGTGGATAGAAGTCCTTTGTCAGATACAAATATTGCAAAGATTTCCTCCCAGTCTTTGGCTTGCGTTTTCCTTTTCTTAATGATGTCTTTTGAAGAGCAGAAGTTATAAAATTTTAATAAATTTTATGCCTGATGAATCTGAATGCAT EMBV3_26155 CCTCTACTGTCTGCGCAAAGCCAAAAATAATGCTGAGAGGAAAGAGAGACACCCAGAGGC Gene GeneID:100336589|LOC100336589:XM_002695415:50_cdna Constitutive 0 NULL GeneID:100336589 18 GENE LOC100336589 NULL leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2-like EMBV3_24388 TGGTTACAGCTTTTCGCTGACTACATTCAGCTGCAAATGGCGTGGTCTTGGCAACTGAGA Variant GeneID:539141|PSMA2:NM_001034662:58_cdna 65^141 5 EMBV3_14925 GeneID:539141 4 GENE PSMA2 MGC127174 proteasome (prosome, macropain) subunit, alpha type, 2 EMBV3_35723 GTCCGACAACATCCCGCAGTACGCCTACACCCTGAACAAGGAGAGCTTTGCCACCCTCAA Gene GeneID:516288|LOC516288:XM_002707743:270_cdna Constitutive 0 NULL GeneID:516288 16 GENE LOC516288 NULL similar to RIKEN cDNA 4933406M09 EMBV3_26812 AGGCTGGGGTGTGCAGCTTCTAGTCGCCTGTGTTGGTGTTGATGGCACAAGTTCTAGAGA Gene GeneID:520487|LOC520487:XM_002688989:61_cdna Constitutive 0 NULL GeneID:520487 7 GENE LOC520487 NULL similar to histone cluster 1, H2bd EMBV3_13263 CTGCCATCAGGACAACTTTGCAAGCTTCGCCACCTATTTCCGCAGGGTGCTGAAGCAAGT Gene GeneID:523458|LOC523458:XM_002699855:2_cdna Constitutive 0 NULL GeneID:523458 X GENE LOC523458 NULL similar to H2B histone family, member W, testis-specific EMBV3_40421 GTGCATTCATAGTCTTGTGGCTTCAGCTTGGATGGTTGAGTGGTGAAGACCAAGTGGAGC Gene GeneID:100296102|LOC100296102:XM_002690566:218_cdna Constitutive 0 NULL GeneID:100296102 10 GENE LOC100296102 NULL hypothetical protein LOC100296102 EMBV3_40325 CGGAAGTCTAAAAGAAACACCTGAGATGTAAGGACTGTTCCCCGCTCCCCAGATCTTCGA Gene BVT0102_362213 - 0 NULL GK000010.2:7044634-7339425 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22561 TGGCTGCATCTTCAGAACTGGATGTTGGTGGCGGTGGTGGCGGCAAAAATAAAGAGGGTA Gene BVT0102_317001 + 1 EMBV3_08954 GK000008.2:54951362-55837380 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00653 CCTCCTGGCCACCTCTGTCTCCTTCCTCCCTCTTATCTTCTCTGTATAACTCTGTGAACA Gene BVV0102_324455 - 1 EMBV3_21156 GK000009.2:3952725-4365166 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009748 TCONS_00218178 TCONS_00238445 TCONS_00253025 TCONS_00250197 TCONS_00156845 TCONS_00006966 TCONS_00207277 TCONS_00231502 TCONS_00249921 TCONS_00250503 TCONS_00148465 TCONS_00251760 TCONS_00209829 TCONS_00210508 TCONS_00060369 TCONS_00009883 TCONS_00207845 TCONS_00037625 TCONS_00066093 TCONS_00229870 TCONS_00055867 TCONS_00208127 TCONS_00199603 TCONS_00220716 TCONS_00249414 TCONS_00244654 TCONS_00038933 TCONS_00039853 TCONS_00249989 TCONS_00066192 TCONS_00020651 TCONS_00166139 TCONS_00089138 TCONS_00185582 TCONS_00062743 TCONS_00156997 TCONS_00007555 TCONS_00251170 TCONS_00187057 TCONS_00122096 TCONS_00019962 TCONS_00198804 TCONS_00054574 TCONS_00009591 TCONS_00108589 TCONS_00252056 TCONS_00244651 TCONS_00124845 TCONS_00218943 TCONS_00176254 TCONS_00056728 TCONS_00178022 TCONS_00161185 TCONS_00135701 TCONS_00047865 TCONS_00241788 TCONS_00157440 TCONS_00136896 TCONS_00010709 TCONS_00007442 TCONS_00242595 TCONS_00038667 TCONS_00249012 TCONS_00209098 TCONS_00179054 TCONS_00249780 TCONS_00129415 TCONS_00244653 TCONS_00242007 TCONS_00063164 TCONS_00110327 TCONS_00071079 TCONS_00070840 TCONS_00010472 TCONS_00166189 TCONS_00152738 TCONS_00250938 TCONS_00071110 TCONS_00186411 TCONS_00176255 TCONS_00020010 TCONS_00240475 80 XLOC_005301 XLOC_131641 XLOC_145112 XLOC_155966 XLOC_153140 XLOC_095305 XLOC_002528 XLOC_125795 XLOC_140991 XLOC_152864 XLOC_153446 XLOC_090345 XLOC_154701 XLOC_128340 XLOC_129018 XLOC_036700 XLOC_005436 XLOC_126360 XLOC_021455 XLOC_040811 XLOC_139364 XLOC_033675 XLOC_126640 XLOC_121256 XLOC_134033 XLOC_152357 XLOC_150512 XLOC_022753 XLOC_023670 XLOC_152932 XLOC_040909 XLOC_011326 XLOC_100977 XLOC_053924 XLOC_111635 XLOC_037470 XLOC_095457 XLOC_003116 XLOC_154113 XLOC_113105 XLOC_073652 XLOC_010640 XLOC_120457 XLOC_032383 XLOC_005144 XLOC_064494 XLOC_154997 XLOC_076388 XLOC_132262 XLOC_106033 XLOC_034531 XLOC_107795 XLOC_098077 XLOC_081924 XLOC_027997 XLOC_148452 XLOC_095895 XLOC_083107 XLOC_006260 XLOC_003003 XLOC_149258 XLOC_022490 XLOC_151955 XLOC_127609 XLOC_108827 XLOC_152723 XLOC_078128 XLOC_148671 XLOC_037891 XLOC_066231 XLOC_042852 XLOC_042617 XLOC_006023 XLOC_101027 XLOC_092503 XLOC_153881 XLOC_042883 XLOC_112463 XLOC_010688 XLOC_147139 Coding TCONS_00208127 XLOC_126640 NonCoding NonCoding - 6:43190918-43192041 - TSS155634 1123 3 TCONS_00208127_1 47 0.996438112199466 1 0 0.00143440238699656 0.000464609468265689 0.00145264937491336 0.00131940783040205 0.000109910477385109 0.000433796921723655 0.000143845097646813 0.000148760161426659 0.000626064974163403 1.07472453868095e-05 0.000244365465443393 3.18404823521182e-07 0.000114443403932471 0.000272290695353677 0.000357074333918077 9.89750079237541e-05 1.68958361595175e-05 3.36833862582589e-05 0.000570287151704806 0.00257734116017415 0.000509334110875651 9.22706026376343e-06 6.62614548114244e-06 2.58759710312493e-05 0.000497706585581739 0.000675329121553226 0.000110362757675639 4.35432233220708e-05 1.44096440360187e-05 0.000173423399346007 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 3e-34 150 68.54 0.38913624220837 0 noncoding CCTGCTGGGTATTCCTCTGTCTCTTCATCTTGTTTATATTGCTGAGTTTGGGGTGTCCTTTCTGTATTTTGTCAGTTTGTGGAGTTCTCTTTATTGTGGAGTTTTCTTACTGCGGGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCTTAGTTAGAGAAGCTTTTGTCAGTGTTCTGGTGGGTGGAGCTGGATTTCTTCTCTCTGGAATGCAATGAAGTGTCCAGTAATGAGTTATGAGATGTCTGTGGTTTTGGAGTAACTTTGGGCAGCCTGTATCTTGGAGCTCAGGGCTGTGTTCCTGTGTTGCTGGAGAATCTGCTTGGTATGTCTTGCCCTGGAACTTGTTGGCCCTTTTGTGGTGCTTGATTTCAGTGTAGGTATGGAGGTGTTTGATGAGCTCCTGTCAATTAATGTTCCCTGGAGTCAGGAGTTCCCTGGAGTCAGGGTTTGGACTTAAGCCTCCTGCTTCCAGTTATCGGTCTTATTTTTACAGTAGTCTCAAAACTTCTCCTTCTATACAGCACCATTAATAAAACATCTAGGTTAAAGATGAAAAGTTTCTCCACCGTGAGGGTCACCCAGAGAGGTTCACAGCATTACATGGAGAAGAGAAGAGGGAGGAGGGAGTTAGAGGTGACCCGAATGAGGTGAGGTGGAATCAATAGAGGAGAGAGCGGGCTAGCCAGTAATCATTTCCTCATGTGCACTCCACAACTGGACCGCTCATAGATGTTCACGGAGTTATACAGAGAAGAGAAGAGGGAGGAAGGAGACAGAGGTGGCCAGGAGGATAAAAGGGAGGAATGAAAAGGAGAGAGACAGATCCAGCCAGTAATCAGTTCCCTAAGTGTTCTCCACCATCTGGAACACACAGAAATTCACAGAGTTGGGTAGAGTAGAGAGGGGTTAGGGAGGAGACACAGGCGACGTGGTGGAGAAAAAGGAGAGTCCAAAGGGGGAGAGAGCAGTCAAGCCAGTAATCTCGCTCCCAAGTAAAAAATGGGTACTGAAGTTTGGGTTCTTAAAGGTACAAAATTGGTAACAAATACCTAAAAGCAAAAATTAAAAATCTAGAGTCGAGTTTGGAATTTCAAAAATACAACGTTAAAAAAAAGAAGGAAA TCONS_00204998 . 5' 167907 TCONS_00204998 . 5' 167907 EMBV3_33000 CCGGCAGCTCCTGGGTCGCCTGAAGCCCAGCCACACGTCTCGGACCCTCATCTTGTCTTA Gene GeneID:510420|MYBL2:NM_001075448:973_cdna Constitutive 0 NULL GeneID:510420 13 GENE MYBL2 BMYB MGC140341 v-myb myeloblastosis viral oncogene homolog (avian)-like 2 EMBV3_01044 ATTTGCTTCCTCTGCGGCCCAGCTCTTGAAAGTACCTCTGTATCACTGACTCACGGTCTG Gene BVV0101_003407 + 0 NULL GK000006.2:58894246-59593795 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00321 TGTGGTTTGAGATGCTGCCTTGCTTGGGCAAGACTGGGGAGTTCAGGCCTATAGCTCTCA Gene GeneID:280840|LIF:NM_173931:5_cdna Constitutive 0 NULL GeneID:280840 17 GENE LIF NULL leukemia inhibitory factor (cholinergic differentiation factor) EMBV3_00822 GTGCCCCTGACAAGGCAATCATGCCCTTGGAACAGTCACCGTCCCCAACAGTGCACAGGA Gene GeneID:525504|MST1R:XM_002697035:478_cdna Constitutive 0 NULL GeneID:525504 22 GENE MST1R NULL macrophage stimulating 1 receptor (c-met-related tyrosine kinase) EMBV3_09117 TGTCGATGAGGTTACGAATTAGTCCTGAGAACGAGTGTCTCACGCTGAAACCTTGGGACC Gene BVV0101_088765 + 0 NULL GK000011.2:104181457-104186562 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37357 CGAAACGCTGCGGGCGCTGCACGCCGCCAGCGGCATCTTGAATGTCCATCCCAGTTGCCT Variant GeneID:286855|MTFMT:NM_001166523:53_cdna 233^442 2 EMBV3_16987 GeneID:286855 10 GENE MTFMT NULL mitochondrial methionyl-tRNA formyltransferase EMBV3_29791 GACATGCAGGCCACGCTCCAAAAGAAGCAGGCTCAGCTGTCAAATCAAGGGAGAGAAATG Variant GeneID:281942|CALCOCO2:NM_174400:29_cdna 546^704 2 EMBV3_29292 GeneID:281942 19 GENE CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 EMBV3_29237 AACTGGCATCAAGAAGAACAGAATATTAGTAGGAGGATTTTCTATGGGAGGGTGCATGGC Gene GeneID:533920|LYPLAL1:NM_001099059:5_cdna UTR3_Alt 2 NULL GeneID:533920 16 GENE LYPLAL1 MGC159517 lysophospholipase-like 1 EMBV3_11890 GGTGAGGTCTCCAACCGAAATAACAAGACTGCCACCCTTGGTTCAGATGTTCTTGTCCAG Gene BVT0102_116007 + 0 NULL GK000015.2:82268179-82283933 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062591 TCONS_00062594 TCONS_00062592 1 XLOC_037366 NonCoding TCONS_00062594 XLOC_037366 NonCoding NonCoding - 15:82276018-82277888 - TSS46366 582 5 0.691278758694489 0.00310129492058753 2.22589394944406e-14 0.000240940108612155 8.00645421384543e-05 1.54922117226392e-11 8.6463889613477e-05 0.000983176382401565 0.000250983392417745 3.1436171392085e-28 0 0 9.94538659237691e-46 2.01470657879554e-34 8.0821685904735e-06 0 0 0 0 0.000263526859423074 0.000190146441863043 0.00011773566321347 0.000293256751235461 0 0 1.16317771502586e-35 7.00164960530426e-05 0.000379714576282343 1.65029036414841e-05 0 0 XM_005216572.1 LOC101905538 PREDICTED: Bos taurus uncharacterized LOC101905538 (LOC101905538), 0.0 973 99.45 0.939862542955326 NM_001145101.1 BTBD18 Homo sapiens BTB (POZ) domain containing 18 (BTBD18), mRNA. 1e-53 214 87.08 0.29553264604811 0 noncoding 0 0 1 1 -0.0205836952855035 0.867409083070816 0.0230513236777009 0.641900047550305 GTGCGTGCGTGTGGTGCGCGAGGACGGTGGCGCGAGGGAAGGAGACCTCGGGACGTTGTGCAGCTTTGCTAAGCCTCCCCGCGCCAGGCTGGAGTGTGGGAGGAAGCAAGGCAGTCTGGATCGAGGACCCAAGCACCGAGACGACCGCAGGAGCATCTCCTCCCGCAGAGCTATTCCAGTTTGACGTGAACCGTTTGGAGCCCCAGTGCCACCTGACGGAAACCTGCATGCCGGGAAAGGAACGCCACCTGTGCAGCGTGTGGGGATCTCGGTGCAGAAAACTGGAAACGTAGCGGAAACAGGCTTCCTCTGGACAAGAACATCTGAACCAAGGGTGGCAGTCTTGTTATTTCGGTTGGAGACCTCACCAAGCCCAGCAGCTTCTCTTCTCTGCTGTGCACCCTCTGCTGGAATCTGATCCATGAAAACCCAGAAAGGTTGTTAAGAGATCAACATGTGCTCTCCTGCCAGTCCCAAAATCCTGTACAGGAATCCCCGGTCCTCCGATTAGCTTTTCTGCAGCTTTATCACCAGCAAAAGAGTGGTGTGTTCTGTGATGTCCTTCTGCAGGCAGAAGGTAAG TCONS_00060313 r 5' 7673 TCONS_00060313 r 5' 5975 EMBV3_43313 CAATTCAAACATAACTTCTGAAATTCCAAGGGTAAAGTCTTTTTTAATGAAAAAGAAAAA Gene GeneID:539972|TMTC4:NM_001105629:26_cdna Constitutive 2 NULL GeneID:539972 12 GENE TMTC4 MGC139344 transmembrane and tetratricopeptide repeat containing 4 EMBV3_42773 TGCAATTTTAGCACAACATGTTCAATATAATTGTTAACTTGTTGTAGTTGATACTCATAT Spike ESK0803 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28259 GACCGGCCTGGGTTCACAGCCTCGCTGGTGCTGCTGCCTTTTTTGTCACCTATGAATATG Variant GeneID:614713|SLC25A26:NM_001103297:62_cdna 343^499 6 EMBV3_42466 GeneID:614713 22 GENE SLC25A26 MGC166132 solute carrier family 25, member 26 EMBV3_06188 GTTCCAGGATATTTACGGGTCTGAACCCTGCTTGTTCAATACATGAAAACACTTCTATAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31445 CAGGCATCAGACAGTTCATACTGGAGAGAAACCTTACAAATGTGATGAGTGTGACAAGGC Gene GeneID:100300095|LOC100300095:XM_002695308:16_cdna Constitutive 0 NULL GeneID:100300095 18 GENE LOC100300095 NULL similar to zinc finger protein 208 EMBV3_16432 GGAGCACCTCAAACTTTTAAGACCTGCACTCGAGGAACAAGCCCCCCAGACATCTAGCTT Gene BVT0102_016397 + 1 EMBV3_41565 GK000007.2:80188617-81396270 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214292 1 XLOC_130663 Coding TCONS_00214292 XLOC_130663 NonCoding Coding - 7:80818417-80819746 - TSS160326 1329 5 TCONS_00214292_5 55 0.289691497366441 1 0 0.000359867905652769 0.00142425137620505 0.00025087229929267 0.000293702752020022 7.34958207610666e-05 0.000157103978766989 0.000103355853172069 0.00014517409958099 0 4.83909867465928e-06 0 0 4.31794702903789e-06 0.000556591670400648 1.34807981296452e-05 0 0 0 7.32818737272708e-05 0.000262792112530902 4.07577726308454e-05 1.57794972045881e-55 0 0 0.000137070767020751 0.000161305625507111 0.000132641085159981 0 0 0 XM_005200703.1 ZCCHC18 PREDICTED: Bos taurus zinc finger, CCHC domain containing 18 (ZCCHC18), mRNA. 6e-107 392 91.73 0.206922498118886 0 noncoding 0 0 0 0 0.0457149812996794 0.686092576192066 0.0167874257836937 0.724073217374945 CACTATAGAGACTATACCAGTGGGAGAAGGAAGACACGGGAACACTAGCCAAGCAGTTCTTAATTGTTGTCTTAGCATTTTCATTTTCTTTACCATCCGCAACTTCGTCGTGTAATTTCAAACAACTGCGTTTCTCCCAGGAGGCTAAGCTCGCAAGAGTGCGCACATCTATCCCAGCAGGGAGTGGGGTGAGGTGGGGCGGGGCGAGGCCTGGGGCGGCCACAAGGAAAGATGGCGACCACCAGTCTCCATTCTGAAGGGTGCGCCAGCAGTCCCCAAATGTGCCGGCAAAGCAGATGTTTGAGTCTCAGGCTGTTGCGTGAAAACAAGCAAAAGAGCCTCTTTCAAACACAGCCCAGGAGCCCTGTGCTGGGTCGCTTCTGTCCAGCGCCCTGAAAGCAGGTGAGTCTGTGCTCCCCAAGCTCTTCCTCAGAACCTCTCGTGGACCTCAGAACCTCTCGTGGACCTGAGTGAGCCTTGTTGGTTTGCAAAGCTAGATGTCTGGGGGGCTTGTTCCTCGAGTGCAGGTCTTAAAAGTTTGAGGTGCTCCATATGGGGTTCAAACCCTTTTCTCCTCAGGGAGAAGTTCCAGGTTTTGACGTAAGTGACGGTCAGGGCTGGGGTTTTTGGTAATTGGGTCTCGGCCTCTCCTACCAGGTTCCACTTGGCCTTCTCCCCTCCCCCTCACATGGAGGAGTCAGTCAACCCATTAAAAATTTTTGTTGTTGTTGTTGTTGTTTTTCTGATAAAGTTGTTCTATATGTAGCTGTAGATTCATTGTGTTCATGGAAATGGGTGAATTCAGGATTCTTTTACTTGTCATCTTGAATATAATTTATCAATATTTAAATGTGGACACACGCTTTATGTTATCCGGAGAAGGCAATGGCGACCCACTCCAGTACTCTTGCCTGGAAAATCCAGTGGATGGAGGAGATTGGTAGGCTGCAGTCCATGGGGTCGCTGAGTTGGACATGACCGAGCAACTTCCCTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGCGGAGCCTGGTGGGCTGCCATCTATGGGGTCGTGCAGAGTCCGACATGACTGAAGCGACTCAGCAGCAGCAGCAGCTTGTGTATTGCCCCAGGTGTAGGCAATAAAGGGCTGCATTTTCTGAAGAGAATTTAAAAACGGTTATGAAACTAACTAAAAGTCAGTCTTCTTGTGATTATTACCATGTCCTAACAATTCTAGGCAGCGCTGTTACAAATTGAATTGTATTCCTTCGAAAGAGATGTTTTGAAGTCTTAAC TCONS_00214291 s 5' 0 TCONS_00214291 s 5' 0 EMBV3_24738 TAATGCCAGTTACTCATCAGAAGTTTGCTATTGTAGTCACCCCGCTCCCTCACCTCCCCT Gene BVT0102_247108 + 1 EMBV3_28806 GK000003.2:90041689-90055298 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173989 TCONS_00173992 TCONS_00173994 TCONS_00173996 TCONS_00173990 TCONS_00173993 TCONS_00173995 TCONS_00173991 1 XLOC_104491 Coding TCONS_00173990 XLOC_104491 Coding Coding PRKAA2 3:90053955-90102954 j TSS129214 2938 1 TCONS_00173990_3 462 9 0.940222049879587 0.000170233691091149 0.00120734271115155 6.53464960110077e-05 2.02515553855378e-08 3.30577156823735e-12 4.17120621844087e-16 8.4463878300223e-12 0.00132343012008309 0.00192419674944663 1.63661119060016e-07 2.13767296631587e-23 1.60602627068361e-11 8.26455359746189e-11 0.00114459310508024 0.000102044328883393 0.000276933887949556 1.31759371525027e-12 6.1950882722237e-11 3.62061535993627e-18 0.000217611295819427 1.56101940021704e-08 1.64624050754221e-05 1.269113146589e-12 1.21572915376155e-05 1.56744301358981e-12 0.000399746261919167 8.80703631773805e-11 1.66087766686078e-12 2.08901737758664e-05 3.1913819932426e-23 NM_001205605.1 PRKAA2 Bos taurus protein kinase, AMP-activated, alpha 2 catalytic subunit (PRKAA2), mRNA. 0.0 2825 100.00 0.532675289312457 NM_006252.3 PRKAA2 Homo sapiens protein kinase, AMP-activated, alpha 2 catalytic subunit (PRKAA2), mRNA. 0.0 3171 83.71 0.989788972089857 TCONS_00173990_3 sp|P54646|AAPK2_HUMAN AAPK2_HUMAN 5'-AMP-activated protein kinase catalytic subunit alpha-2; 0.0 950 98.05 0.997835497835498 3 coding 1 1 1 1 0.00177573071072445 0.98832653630208 -0.0301018233986602 0.780675282882391 AATGCTGGGTGTAAAAGGATAAACATGCAATTGGAGAGCATCAATTGACAGGCCATAAAGTTGCAGTTAAAATTTTAAATAGACAGAAGATTCGCAGTTTAGATGTTGTTGGAAAAATAAAACGAGAAATTCAAAATCTAAAACTCTTTCGTCATCCTCATATTATCAAACTATACCAGGTGATCAGCACTCCAACAGATTTTTTTATGGTAATGGAATATGTGTCTGGTGGTGAATTGTTTGACTACATCTGTAAACATGGACGGGTTGAAGAGATGGAAGCTCGGCGGCTGTTTCAGCAGATTCTGTCTGCCGTGGATTACTGTCACAGGCACATGGTTGTTCATCGAGACCTGAAACCAGAGAATGTGCTATTGGACGCACAGATGAATGCCAAGATAGCTGATTTTGGATTATCTAACATGATGTCAGATGGTGAATTTCTGCGAACTAGCTGCGGATCCCCAAATTATGCAGCACCTGAAGTCATCTCAGGCAGGCTGTATGCAGGTCCTGAAGTGGATATCTGGAGCTGCGGTGTTATTTTGTATGCTCTTCTTTGTGGCACCCTCCCATTTGATGATGAGCATGTGCCTACGCTGTTTAAGAAGATCCGAGGGGGTGTTTTTTACATCCCAGAATATCTCAATCGTTCTGTTGCTACTCTCCTGATGCATATGCTGCAGGTTGATCCCCTGAAACGAGCAACTATCAAAGACATAAGAGAGCATGAATGGTTTAAACAAGATTTGCCCAGTTACTTATTTCCTGAAGACCCCTCCTATGATGCTAACGTCATTGATGATGAGGCTGTGAAAGAAGTGTGTGAAAAATTTGAGTGTACAGAATCAGAAGTAATGAACAGTTTATATAGTGGTGACCCTCAAGACCAGCTTGCAGTGGCTTATCATCTTATCATTGACAATCGGAGAATAATGAACCAAGCCAGTGAGTTCTACCTCGCCTCTAGTCCCCCAACTGGTTCTTTTATGGATGATAGTACCATGCATATTCCCCCAGGCCTGAAACCTCATCCGGAAAGGATGCCACCTCTTATAGCAGACAGCCCTAAAGCACGATGTCCACTGGATGCACTGAATACAACGAAGCCCAAATCTTTAGCTGTGAAAAAAGCCAAGTGGCATCTTGGAATCCGAAGTCAAAGCAAACCATATGACATTATGGCTGAAGTTTACCGAGCTATGAAGCAGCTGGATTTTGAATGGAAGGTAGTGAATGCATACCATCTACGTGTAAGAAGAAGAAATCCAGTGACTGGCAATTATGTGAAAATGAGCTTACAGCTGTACCTGGTTGACAACAGAAGCTATCTTTTGGACTTTAAAAGCATTGATGATGAGGTGGTGGAGCAGAGGTCTGGTTCCTCAACACCTCAGCGGTCCTGTTCTGCTGCTGGCTTACACAGACCACGGTCCAGTTTGGATTCTGTAACTGCGGAGGGCCATTCACTCTCTGGCTCTCTCACGGGCTCTTTGACCGGAAGCATGTCGTCCTCTGTCTCACCTCGCCTGGGCAGTCACACCATGGATTTTTTTGAAATGTGTGCCAGTCTGATCACTACTTTAGCACGCTGATGATCTTTCCCTAGTTTTTTTTCTTTCTGTTATTGCACTGTGAAAATCAGATATATTCTTTAAATTATTATTTTACTTATGGATATCACATATTCTGAAGTACTGGTTGAGAGCCGTGACTGTCTTCAGGGGACACAGTACCATTGAAATTTACTGAAAAGAAAAAGTCTGACATCTTATTTACTGTAGACATCTGTAATTCTGTTTTGCCTATTATAAATTCACATAGGCAGTATCTTTAATATGTGAACACTCATGATTATTGTTAACCTGAAATTGTGGACTCACTACAGATGATTAATATACCTTTACTGGTGAACCATCTCAGTCAACAGGTGGTTTGGCAACATCTTGCTTTACTGTTTAGTGTAGGTAAATCCAGTTTGCTTCCTAAATTTCAGCAGGTTTTAAGCTGTGTTTATGCACAAGATTTAAAAATAACATATATATTAGTAAGATAGTATTTAAATGTTGAAATCTTAAGAGCCAGATCCCCCTCCCCCAAATTTTAGAACCAAATTCTAGCAGTTTCTGCAGATATTGCCCAGTGTTCAACAGAAGGACTGTGGTCCTGAGACAGGTAATGGTCATTTCCAAGTTCCTTCAAAACAGCTATAACCAACCAGAGGCTCTATCTTGAGATTTTCCTGAATAACATATATAAGAGCCTTCAAGGTTCTACTCAGTACTGGAACATCTGGAGTTACAACTTTTGTCTTTTTCATAAACTTGTATCATTTTACAACATGCCTTCAAAGTCTACCTTTCTCAAGTTCTTTTTCACTGTATTTATTTTTGTACTCCACCAAGCATGATAAAATAGTTAAAAGAAACAAAGCAAAATGTCAACAGTCCCTTAGAGAGAACTCTTATCTCTGGTCTCTTCCTGTGTGTAGTGGTAAGGAGTGTGTGTGTGCCTGTCCTTTTGCATCCTGTAATGCCAGTTACTCATCAGAAGTTTGCTATTGTAGTCACCCCGCTCCCTCACCTCCCCTGATCACCTTTGTCTTTGTTTATTGTTTGATCCTTAGTGGCTGATGGGCTTAGTTTTGAAATCTTCTCTGGTTCTCTTTCTTTGTTCTACATCTTGGTTGCTAGCCATCCAATTTGAAACACTGTTCTGGCCCTAAGGGCTTTTCTATACTTCCAAAGCTTGGTAGGCTTGTGACCTTCACTGTTGAACCTGTTAGGGCAGGGAAGCCTTAAACATTCAAAAAAATTCTCTCTTGAATAAATATGTATGTTGTTTACATATATACATATATGTATTTGTATACCAGTGCTTTTAAAGGAAAACCAAACTTTTATTTTTGGCTTTGTGCAAGTTTTTTTCAGGCTTAAAA EMBV3_20250 TGAAATGACATAGCTACCACCCCCACACCTAAACTGAGGTCAGACCACCTTAGGCTTCCA Gene BVT0101_012382 + 0 NULL GK000015.2:30018906-30022953 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03975 GATGCTCAAGGACAGCGCCATGCTGGAATACCTGCGGATCAACAAGCGGATCCTGCAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14057 CAAGGGTGGTCTTGGCCTACACACTTGGCTTTTCTGCTCCTATGAGATCAGGATACATAT Gene BVT0102_139393 + 0 NULL GK000007.2:8751070-8754348 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32800 GCAAAAGATACTGTAAGAACCGAGGAAGCCTCTACTAGCTCAACCCAACATGGAAGCCTG Gene BVV0102_418414 + 1 EMBV3_28072 GK000004.2:31407463-31578310 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181150 TCONS_00181151 1 XLOC_110550 Coding TCONS_00181151 XLOC_110550 Coding Coding IL6 4:31576735-31583677 j TSS135669 2625 1 TCONS_00181151_4 295 0.167238095238095 5 0.622532776257023 5.69133704176125e-05 0 1.99283897008086e-11 0 0 0 0 0 0 2.59114095547564e-06 9.81523295358374e-10 1.34566039962534e-15 0 0 5.9298213193696e-08 0.00154292893833507 0.00189592240160574 0.00156738972592755 0 0 0 0.00177255557799398 0.00144471134797113 0.00176551487343644 0 0 0 0.000834928634025085 0.00026683432659415 0.000456628658954897 NM_173923.2 IL6 Bos taurus interleukin 6 (interferon, beta 2) (IL6), mRNA. 0.0 1874 100.00 0.395428571428571 NM_000600.3 IL6 Homo sapiens interleukin 6 (interferon, beta 2) (IL6), mRNA. 0.0 753 76.12 0.392 TCONS_00181151_4 sp|P26892|IL6_BOVIN IL6_BOVIN Interleukin-6; 3e-145 411 99.50 0.68135593220339 1 coding 0 0 0 0 0.041451832733969 0.749302810562874 0.00346681007370883 0.943822680192944 ACAGGATCTGCCTCTCAATTTAGAAAGTCAGTGAAAGAATGAATGACCTCGCGTTCCCCAATAGGCAGGTCCCAACATGTTGTTCACAAAACAAAACTTAAGTAAATTGATTTGTGTTTTAAATACCCTAGCTGAGGTCCCTGTTTTAGCAATCCTGACAAGATCCTCTTTGCAAAGTAAAGAAGTTGATTGTGATGTTAACACTGTGTTTTGTAAACAAAACATACAAAAAAAGAGGGCTTTTTTTTCCCTTGGTGTCATACAAGGGTCCTACTTGCAGTCTGGAACCAATCTTCTGAGCTGTCTGGATGTCTGGGAGACTGGGGGGAACGGCCTGGTATACAGATCTTCTGCATGAAACCAAGGACCCTCTTGCAAAAGATATTGTAAGAACCGAGGAAGCCTCTACTAGCTCAACCCAACATGGAAGCCTGAGGCATTGGAGGGGAAGTGTGATTCCAAACCCAGAGTCCTGTTCTATCAGTAGATTTCTTCTCAGTTGCCTCTGGATTCAAATCAAGTCATACAGCTATGAACACAAGCTCCAGAAAATGCCACAAGATCCTCCTCTGACATACTACCAAAGAGGCGCCTTCACTCCATTCGCTGTCTCCCTGGGGCTGCTCCTGGTGATGACTTCTGCTTTCCCTACCCCGGGTCCCCTGGGAGAAGATTTCAAAAATGACACCACCCCAGGCAGACTACTTCTGACCACTCCAGAGAAAACCGAAGCTCTCATTAAGCGCATGGTCGACAAAATCTCTGCAATGAGAAAGGAGATATGTGAGAAGAATGATGAGTGTGAAAGCAGCAAGGAGACACTGGCAGAAAATAAGCTGAATCTTCCAAAAATGGAGGAAAAGGACGGATGCTTCCAATCTGGGTTCAATCAGGCGATTTGCTTGATCAGAACCACTGCTGGTCTTCTGGAGTATCAGATATACCTGGACTACCTCCAGAACGAGTATGAGGGAAATCAGGAAAATGTCAGGGATTTGAGGAAAAATATCAGAACACTGATCCAGATCCTGAAGCAAAAGATCGCAGATCTAATAACCACTCCAGCCACAAACACTGACCTGCTGGAGAAGATGCAGTCTTCAAACGAGTGGGTAAAGAACGCAAAGATTATCCTCATCCTGAGAAACCTTGAGAATTTCCTGCAGTTCAGCCTGAGAGCTATTCGGATGAAGTAGCTGGGGCTCCCATGATTGTGGTAGTTCCTGGGCATTCCCTCCTCTGGTCAGAAACCTGTCCACTGGGCACACAACTTATGTTGTTCTCTATGAAGAACTAAAAGTATGAGCGTTAGGACACTATTTTATCTTTAATTTATTGATATTTAAATATGTGATTTTGAGTTAATTTATATACATGATAAGTATTTATATTTTTATGAAGTGCCACTTGAAATATTTTATGTATTTGGTTTGAAAAAGTAACGTAAAAATGGCTATGTGGCTTGAATGTCCTTATTGTTTTGGAGACAAATCATTTCTTGAAATGTGTAGGCTTACCTCAAAAAATTTGCTAACTTATGCATATTTTTAAAGGCATATTTATATTGTATTTATATAATGTTTAGGCTGTTTTTATAACAATAAACTTCTTTTTTAAAGAAAAAAAAGCAACTAAACCTCTGTGTGTGTCCCATGAAGCTTAGTATAAACAAGTTTCTGTCACTACCACCACCACTAAAACAAAAAGCTGCAGTCACCTGGAGGAAGATATAATTGAGCACCTATTGCATGCCAGGCACCAAGCACAATGAATTGCATGCATCATATTTAATCCTTGCATTTGCACACTTTTCTCTGGAGGTGGGAGAATAAGTGATTCCCTTAGTTACCCAGCTGAAAAGTAAACCACAGGCCCAGTCTTCCTGCCTCCAGGCTCCCTACTCTTAACCTTTAGGTCCTCCGCCTCACAGGGAACTGACAGATGAGGTAGAAAATCCCAAAAAAAATACAGGGAATACATTTTAAAGATGCAATCACACACCTTTAAGATGGTATAACCACTTACAGAAGACATAGCAATATGCAAGCTTCTGAATAATAACTAGAAGTTTTTATTCCTGGGTTCCTCAAACTGCACAGATCTGTCCATCACATCAATGACCATACTGTATCACATCTTAAAATGGGTGGATTTTTCTTTCCAGTCAGCATATGGGTTCCACAAGAAGGAAGACTCTATTTATTCATCTTTGCATCCTGAGCCCACAGCCCAGAACATGAATATTCAATTCAGTTCAGTCACTCAGTCGTGTCTGACTATTTGTGACCGCATGGACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCTGGTGTTTACTCAAACTCATGTCCACTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCTTTCTCCCACCTTCAATCTTTCCCTGCATCAGGGTCTTTTCCAATGAGTAAGCTCTTCGCATCAGGTGGCCAAAATATTGGAGTTTCAGTTTCAGCATCAGTCTTTCCAATGAATATTCAGGACTATTATCCTTTAGTATGGACTGGTTGGATTTCCTTGCAGTCCAAGGGATTCTCAAGAGTCTTCTCCAACACCACAGTTCCAAAGCAACAATTCTTCAAC EMBV3_01571 TGGGCAGCATCACATATCATTGGTATACAGTACTCTAACTTACTCAGTGATTTGACCCAC Gene BVT0102_260252 + 1 EMBV3_00454 GK000020.2:18288971-18371754 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38645 TCCGTTGCAGCCTCTGACCCCAGATGTTCCGGAGCAGAGCCGACAGAATGGCAGTGACTT Gene GeneID:497620|SPDEF:NM_001081578:68_cdna Constitutive 0 NULL GeneID:497620 23 GENE SPDEF pdef SAM pointed domain containing ets transcription factor EMBV3_28469 ACGACTACGGCGAGGACCCCACCGTCCGCGGTGCACTTGCTGGCCCAACGCTATGGGGTC Variant GeneID:507443|LOC507443:XM_002696158:98_cdna 272^630 1 EMBV3_39069 GeneID:507443 19 GENE LOC507443 NULL similar to threonine aldolase 1 EMBV3_13225 AATGGATCAGGCAGGCGCTGCATTTCATGTTAGCTTCAAACAACCGTCAGAGCATAGCTC Gene BVV0102_084231 + 0 NULL GK000024.2:3684975-3761519 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42646 GACGCCAGGATCTCCCTGAAGAAACACAATGAATGACAAGTTGTTGATTTAAGAAAGTGC Gene BVT0102_362370 + 0 NULL GK000004.2:15353124-15543252 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11033 ACTTCATCAACATCAGCACCGACATGAACACCGAGGTGGATGCCCTGGACCCCAGCATCA Gene GeneID:515612|FOXN4:XM_002694537:483_cdna Constitutive 0 NULL GeneID:515612 17 GENE FOXN4 NULL forkhead box N4 EMBV3_00027 ATATGGCATTGCCAGATTCTTCACAGAATAATTTGCTGACCATGAGGGAGTATCACTGCT Variant GeneID:505437|C15H11orf49:NM_001038037:33_cdna 202^332 2 EMBV3_00297 GeneID:505437 15 GENE C15H11orf49 C11orf49 MGC133722 chromosome 11 open reading frame 49 ortholog EMBV3_07731 AGTGAAGGCTGTGAGTCTGCATCTCGGCCCATCAATCCTTCTCCTTATTCCCATGATGAG Gene GeneID:100295456|LOC100295456:XM_002686701:169_cdna Constitutive 0 NULL GeneID:100295456 4 GENE LOC100295456 NULL hypothetical protein LOC100295456 EMBV3_32761 AAGGCAGCGAGAACGCAGGGAGACCTTAGGGACTTTCGGAGCATTTTCCAGGTTCCTCTT Gene GeneID:784002|LOC784002:XM_002696724:152_cdna Constitutive 0 NULL GeneID:784002 21 GENE LOC784002 NULL hypothetical LOC784002 EMBV3_10806 TCCCAGGTCAGGGCTCAGAAGTTGCCCATGTTCTCATTCGGTTTATACAATAGCCAGGGC Gene BVT0102_152514 - 0 NULL GK000023.2:36294298-36601289 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05705 TTTTCAGAGAGAGGTAGTGGGGGAGAGCCCCCCGTAAAGTCAGAGGTTTAGGTGAAAGCA Gene BVV0101_075315 - 1 EMBV3_28681 GK000025.2:33339-93788 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219194 TCONS_00098956 TCONS_00218607 TCONS_00247212 TCONS_00204180 TCONS_00132809 TCONS_00120346 TCONS_00091893 TCONS_00142959 TCONS_00071024 TCONS_00180616 TCONS_00242271 TCONS_00206254 TCONS_00177173 TCONS_00066112 TCONS_00166670 TCONS_00174930 TCONS_00196907 TCONS_00174931 TCONS_00242573 TCONS_00206255 TCONS_00224160 20 XLOC_132513 XLOC_059200 XLOC_131927 XLOC_151269 XLOC_124364 XLOC_080882 XLOC_073143 XLOC_056664 XLOC_087384 XLOC_042797 XLOC_110383 XLOC_148935 XLOC_124865 XLOC_106947 XLOC_040830 XLOC_101506 XLOC_104738 XLOC_118572 XLOC_149236 XLOC_137456 Coding TCONS_00132809 XLOC_080882 Coding Coding LOC615257 23:26688280-26690858 = TSS99285 1852 1 TCONS_00132809_3 245 0.25 3 0.282499029879705 0.000230189861376876 8.40986065803822e-05 9.82696984830033e-05 7.17421206484414e-05 0.000122629766048199 0.000119750247863656 8.65939013962548e-05 0.0001628778919652 0.000428163647505044 0.000837560635200307 0.000443333722593521 0.000637781019621108 0.000148731666861576 0.000870357288072111 0.00040030720342554 0.00429972551649751 0.00150753438400499 0.00344119198991495 7.35677772506258e-05 0.000309349840721391 7.34891233802112e-05 0.00166384186288598 0.00175439660919951 0.00242824707230381 0.000118467549760973 0.000261225411348455 0.000285259164908161 0.00142582211898723 0.00143405661643216 0.00137997367182381 XM_002697375.3 LOC615257 PREDICTED: Bos taurus butyrophilin, subfamily 1, member A1-like (LOC615257), mRNA. 0.0 2522 100.00 0.754319654427646 NM_001732.2 BTN1A1 Homo sapiens butyrophilin, subfamily 1, member A1 (BTN1A1), mRNA. 4e-09 68.0 65.49 0.179805615550756 TCONS_00132809_3 sp|P18892|BT1A1_BOVIN BT1A1_BOVIN Butyrophilin subfamily 1 member A1; 2e-57 194 51.40 0.726530612244898 2 noncoding 0 0 0 0 -0.0487859337043163 0.741666882883467 0.025132913440539 0.618495538823466 TCTATCTTGAGTCTTGTCTCTAGTGCAGTAGGATAGGATGGGAAAACAAAATAAAAATGTCTGTAGTCAGCAAAGAAGAATTTCTAACACTACCTTCTAAATTCTGTAATTTCAGTGAATTGTCTTTGAAGGGTAAATGATGAGTGATTCAGCATATTTTTTCTCCTTTCTTCCTTTCTTCCTTCTCATCTTTACTTAATCTTCCTCACCCTCCTCCAATATCCTTCTGATCTTTTGTTGCTGCTTTATTTCTACCTTTCCTACACCTGACCACTTTTATTTTCATGTTTGAAAAAAACAGAATATGAAGATAATACAGGATAGAAAGAGAAAGCCCAAGGGATTCAAAACAAGAAAGGGAATAAAGAAAACAGAAAAAGAAAACAATAGTAAGAGAAATCTGGTAAGGAAAAAAAAGGTAAAGGGTTTCCTATTTTGTTCTTTTGCAGCCTGGAGGAATGTACCATTATACCCTGATTGGAGGAAAGAAGAATTCAAAGCTGTAAATATGACCCTGGATGCAGCCACTGCTCATCCTGCCCTCCTCCTGTCTGAAGAAGGGAGACAAGTTTCCTGGCAAGAAAGATGTCAAGAAATTCCCAGCTCCTCAGAGAGATTCAGCTCCATTCCCTGTGTGCTGGGTCAATTGTGCATCATCTCAGGGAGATACTCCTGGGACATAGAGGTTGGGGACGCCTGTTCCTGGGACCTGGGAGTTTGTAGGGATAATGTAACAAGGAAGGGTAGGGTCACAATGTCCCCAAAGAATGGTTTCTGGGCCATTAGGTTCTATGAGGGGGAGTATTGGGCCCTCACCTCCCCAGAAACCCCTCTTATTCTAAGAGAAAAACCCGTTATTGTGAGGGTATTTCTGGATTATGAATCTGGAGATGTATCTTTCTATAATATGACAGATGAATCCCACATCTTCACCTTTCCCCAGAACCCATTCTATGGTGTCCTAAAACCACTTTTCAGACTTTGGTCCTCTGAGTCAGGCTCCCTAACCATCTGTGTAGGTGAAGAATGTGCGATGTTGTAATTCATATGTCTACCCCACTCCATGAGAAATGATTACTTTGATCCCCGATGAAAATCACAATTCTCCCCCAATGAGATACAAATAGATATTTTTCTTATTCCTTACTTGTTCATTCTCAAGATGAAGCTCTGGACACAGACTGATGATTGCCTCATATCAATTCCCCCTTCCTCTTTATTTTATCCTTCTTTATTTATTTATCCTTCTTAAATCTTCTTTATTTATCCTTATTATTATACTTTCCTATGACAGCTAATATAATATAAATATTAGATTTCCTTATCTCTCTACTGAAAGTGAATAAATGATGATGCTGTATATCAGCTGAATTATAAGGATGTGTCCTTAAAGGTAAATTGTGCGTTTCTATTCTTCTTTACTTTCTGCTGACTGTAATATATCATGATGGCTAGAACTCTGTGGGGAGTGAGCTCCTCCCGTGCCAAAGGTCATGAGGAAGGAGGCTTGGCATACGCAAAGGTGGGATCAAGCCTCAGGAGTCCCCCTGGAAATTCTCGAGCATCTACCCCCAAAACCAAAGTCTGCCTACTTTCTGCCTTGTGCTTTCACCTACACCTCTGACTTTACGGGGGGCTGTCCCCCACTACCTCTCTCTGAAAAAAGAGTTAGCTTACAGCTCCAGTTAACAATTCCTGGGTGTGACAGTGTTTCAACCTACAAACTCCTTTGGAAATCCTCTAGCCTGCCTGAATAGGTTTTTCCAGCCACATGTGATTGCTCAGAGCCTCCCAACTGTGAGAGGCATGAGATGTTCTAAACTGTCTAAATACAGATTCCTTTGAGCAGTTA EMBV3_10143 GGCCTTATGGAGGCTTGACTCCCCAGGAAGTTCAGATAAATTTCTCTGAGAACTGTAGCA Gene GeneID:520387|LOC520387:NM_001102503:34_cdna Constitutive 2 NULL GeneID:520387 5 GENE LOC520387 MGC142988 KIAA0528-like EMBV3_43734 AAGTTAACTAAAAATACGCTTTTTTTTTTACATAATTTAGAGGTTATGATAAAGTTTTGA Gene GeneID:520530|MDFIC:NM_001101102:60_cdna Constitutive 2 NULL GeneID:520530 4 GENE MDFIC NULL MyoD family inhibitor domain containing EMBV3_03558 TTCAACTGGAATGACCAGCGCTGCAAAACCCGCAACCGCTACATCTGCCAGTTTGCTCGA Gene GeneID:516050|MRCL:NM_001102034:103_cdna Constitutive 1 NULL GeneID:516050 18 GENE MRCL MGC159743 mannose receptor-like precursor EMBV3_23247 AGAGTCTGTGTTTTGTTCTCATTTTTCTCTGTTTGGCGAGTGGCCCTCAGGTCTGTGTAC Gene GeneID:515224|HAPLN3:NM_001098981:111_cdna Constitutive 0 NULL GeneID:515224 21 GENE HAPLN3 MGC159574 hyaluronan and proteoglycan link protein 3 EMBV3_42237 ACATTGATGGCCCGGATCACAAACTGCATCTCTTTGAGAACCCAGCTTTCGGCGGCCGCA Gene GeneID:282206|CRYBB3:NM_174527:17_cdna Constitutive 0 NULL GeneID:282206 17 GENE CRYBB3 NULL crystallin, beta B3 EMBV3_26045 AGTGTTTTCCATCTGAGCAAATCCAGATCAGCAGCCTGCTTCCTAGCTTACTTCAAGAAT Gene GeneID:100296216|LOC100296216:XM_002690507:487_cdna Constitutive 1 NULL GeneID:100296216 10 GENE LOC100296216 NULL similar to chromosome 14 open reading frame 119 EMBV3_16495 GTGGAAGTCCGCTTTGTGAGCAGCGCCAAGCCTGTGACCACTGTCTTCGGGCACTGGAGA Variant GeneID:509313|SMYD5:NM_001080248:4_cdna 103^211 2 EMBV3_27186 GeneID:509313 11 GENE SMYD5 NULL SMYD family member 5 EMBV3_32308 TTTACTCTTCACAGGATGTAGGTAGGAGAGCTCGGGTGTTGCTGATGGAAGTTCTTGCCG Gene GeneID:513618|PCOLCE2:NM_001075629:30_cdna Constitutive 0 NULL GeneID:513618 1 GENE PCOLCE2 NULL procollagen C-endopeptidase enhancer 2 EMBV3_23812 CTGTCCTGACACTGCCCATGAGGCCCCCAGCTGAACAGCTCTGCCACCCTGGGTCCTGCA Variant GeneID:515368|PRSSL1:XM_002689162:187_cdna 99^397 1 EMBV3_35583 GeneID:515368 7 GENE PRSSL1 KLK10 similar to protease, serine-like 1 EMBV3_06870 TCCGGTTATGCAGAAGAATGTCCTGTATATAAGAAACACTAGGGTTGGGAAGAAAGGTAC Gene BVV0102_145050 + 0 NULL GK000010.2:58450337-58507401 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24024 TTTCTACGGCCACCGCCCGGTCATATTTGGTGCCTGAAGGAGGAGACAGAGTGACAGACC Variant GeneID:407767|HMGCS1:XM_002696363:39_cdna 57^112 3 EMBV3_06630 GeneID:407767 20 GENE HMGCS1 NULL 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) EMBV3_08428 GACCCCTCGTGTGTAAAAAAGTGGTCCATGGTATTTTCTCCTATGGAAAGACGAATGGGA Gene GeneID:617313|GZMH:XM_002696688:371_cdna Constitutive 1 NULL GeneID:617313 21 GENE GZMH NULL granzyme H (cathepsin G-like 2, protein h-CCPX) EMBV3_27427 CCGCCCTCCAGCGCCGGGCTGTTCCCTAGGAACATCCCAGGGAGCTCCACAGGGTCCCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27438 CCGGTTGCTGGCTACCTCCACTTCGAGCAGGTTCGTGAGCCGCATCTTCGTGGTGCCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14993 TTCCATATCACTTGGTCCACCATCATCACTCACTATGCCCCACAAGGCCCTGCTCCATCT Gene BVV0101_005409 - 1 EMBV3_33462 GK000030.2:91391795-91441701 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11766 AAGGTGCATGTCTTCACCGTCGTCCAGCTCACCTGCCTGGTCCTCCTGTGGGTGATAAAA Gene GeneID:510209|SLC4A7:NM_001098926:77_cdna UTR3_Alt 2 NULL GeneID:510209 22 GENE SLC4A7 MGC157111 solute carrier family 4, sodium bicarbonate cotransporter, member 7 EMBV3_06153 CACACGCCACTAGGGCCCTAACACCAGGTTATTGGACACAGTTATCACTTTTCCTTTAAC Gene BVT0102_362364 + 0 NULL GK000014.2:35569173-35583250 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00055888 1 XLOC_033696 NonCoding TCONS_00055888 XLOC_033696 NonCoding NonCoding - 14:35577051-35579113 - TSS41565 2062 3 TCONS_00055888_5 72 0.257032007759457 1 0 0 0 4.4878824549654e-06 0 0 2.89124746148265e-07 0 0 0 1.79585365156112e-05 0 0 0 0 2.45609560424693e-06 0.000486731641469567 0.000475040011667419 0.00214769293818797 7.14162123263975e-07 0 2.94444829197619e-07 3.95864574254362e-05 6.67366424347533e-05 0.00046749030024409 4.80010463188962e-07 0 2.84149094027422e-06 1.39745860431333e-05 4.00234490258736e-05 4.37360305003094e-05 XR_227370.1 LOC101901912 PREDICTED: Bos taurus uncharacterized LOC101901912 (LOC101901912), 1e-67 262 87.96 0.103782735208535 0 noncoding 0 0 0 0 TCAATCCAACACACATTTTATTCTTTTTTTTTTAAACTTTTTTTTTCTGAATTTGCAAGAATCAAGTATTCAAGATGTTGTAAACCAATGTTTCTTAGTACAATGACAATAGATTTCATTAAACACAGGAAATTATACATCTTGTACATTACCCTAAGAGGTCTCCAAATAAATATTCATTTTAAAAATCACAAAATCAAATTTCTTTATGCAACAACTCAAAACAGCCTTTCATCACAAGCACACCCTATACACAAACACACACACACTGAACACACACGCCACTAGGGCCCTAACACCAGGTTATTGGACACAGTTATCACTTTTCCTTTAACTAAAGAATCGGTGGCTGACCTGCCATTCTCATGCTTCCAAATTAATATTTGGGGTAGAGGTATGTATTTTAAGAAAAATGCCCACTATAAAGTCTTACCATTATCCTTATCTTTCATTTCAACATACAAACTTTAAACTTCTTTTGTTCACCCCTTTGGTTTAATATGTCCCTGCAATTACTTCAGTTTTCAATAATACCTTCTCCTTCAATTTCAATATGTAATAGTAGAATACCAGAAAAAGACAACACCTTCAAAATCTCAATATTATAAAAACACCTTACATGTGTGTAAGGTTTTGGGGGAGAAGAAATAAGAAAAGATTATCTGAAATATTTTTCCCCTCTCTCTGAAATTATTTTTAGCATCTGATTATTCTTGCTAAAATAAATATCAAAAGCACTGAGTTTTCCATAAAAAAAAGTAATCCTCCTTACACTCTTCTTTTTTGCAGCGTTAAGTTCATGAATTAACTGTGGTAATGAGAGTAATGAATGCTTATTTTCTGAGAAACTCTCCAGATTTCTAAAAGCAAAGCACATGCAGCCCGTTCAGTGAAATACTGTCAAGTCAGTGGTGCATTTTTGTAGTGAGCATGCATCATCAAATACTTCTAGCACCGAGGCATTTATTTTTTAATGTTTTAAAAGCAAATACCCAGGGAGGGTTTACATCATAGCTGGGCTTCCAGATGGGTGCTAATGGTAAAGAACTCGCCTGCCAATGCAGGAGACATAAGAGACGTGGGTTCGATCCCTGGGCTGGGAACAACCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGAACAGAGGAGCCTGGCAGGCTACAGTCCATAAGGTTGTACAGAGTCAGTCACGACTGAAGCAACTTAGCACGAATGACCCTTCCTGGGGCTGAGTAAAAATGAAGTGCTTAAAATAACCTCTTCAAACATACACAGATCTCATTCCAATGTGGCAAGAAGTCTGGGATAGATACAGCCAGCAGCATACTAGAAGGTAAGGAAAGCAGAGAAGATAGAAAAGATAAAGTGCATGAGGCCAGAAATGTCGCCTTGCCAGCCATGGCACTCCCTTCCAAACTAGAAAGAGGAAATGCAGTTATATGTGTGTAAAGAATCTCTACCCATCCGTATAACAGGAATAGCAAGCCTGCATCCTAAACAATCCTGGGGTTATGCAGTATTTTGATATCCACCTGCTACTTAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTGGGCTGCAGTCCACGGGGTCGCGAAGAGTCGGACACGACTGAGCGACTTCACTCACTTCGCTACTTAGAATACTCAGTATGCACCTTTATGAGGCTTACTAGGTGGCACCAGTGGTTAAAAAAAAAAAAAAAAAAACACAAACAAACAAACAAACAAAAATCCCGCCTGCCAATGCAGGAGACCTAAGAGATGCACGTTCAATCCCTGGGTCAGGAAGAGCCCCTGGAGGAGGGGATGGCAACCCACTCCAGTATTCTTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGCGGGCTACAGTCCAGGGGGTCACAAAGAGTTGGACACAACTGAAGTGACTTAGCAGACACACACATGCACCTATATATCAGTAGCTATGATCACATTTCTGTGTCATTTAGGATGCTTTAAGTACACACAAAGTCATACTGTATTTGGCTACCACCCTAGGTTCC TCONS_00053202 . 3' 2956 TCONS_00053202 . 3' 5017 EMBV3_24271 TCATCGGTGTCTACTTTGTCGTGTGCATGGCTCTCCTGGTGATCAGCTTGGCCGAGACGA Gene GeneID:617674|HTR3A:XM_002692995:168_cdna Constitutive 0 NULL GeneID:617674 15 GENE HTR3A NULL 5-hydroxytryptamine (serotonin) receptor 3A EMBV3_09194 ATCCTCCTTCCATTCTCCTGTCTGTGCCCACATGGCCCAAAGCCAACCAGTGTGGGAACT Gene BVT0101_049199 + 1 EMBV3_09673 GK000014.2:8304706-8970644 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01450 GAATGCAGAGTTCCAAAGAATAGCAAGGAGAGATAAGAACGCCTTCCTCAGTGAGCAGTG Gene BVV0102_005911 + 0 NULL GK000024.2:60586880-60797440 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229800 TCONS_00040048 TCONS_00109778 TCONS_00135762 TCONS_00221296 TCONS_00071718 TCONS_00031651 TCONS_00169610 TCONS_00126965 TCONS_00056344 TCONS_00219257 TCONS_00121471 TCONS_00010463 TCONS_00230779 TCONS_00125224 TCONS_00199297 TCONS_00219085 TCONS_00075991 TCONS_00137699 TCONS_00178864 TCONS_00039063 TCONS_00130890 TCONS_00218440 TCONS_00090428 TCONS_00240081 TCONS_00153235 TCONS_00221284 TCONS_00186235 TCONS_00037849 TCONS_00233467 TCONS_00201298 TCONS_00049545 TCONS_00099063 TCONS_00035310 TCONS_00223801 TCONS_00210377 TCONS_00028151 TCONS_00081454 TCONS_00239620 TCONS_00019172 TCONS_00019869 TCONS_00202906 TCONS_00080811 TCONS_00251634 TCONS_00222386 TCONS_00062800 TCONS_00254001 TCONS_00240822 TCONS_00010496 TCONS_00070513 TCONS_00028152 TCONS_00222370 TCONS_00088960 TCONS_00248241 TCONS_00243220 TCONS_00070533 TCONS_00075990 TCONS_00022229 TCONS_00180525 TCONS_00028149 TCONS_00028150 TCONS_00035308 TCONS_00210526 TCONS_00189486 TCONS_00202905 TCONS_00021040 TCONS_00106729 TCONS_00166607 TCONS_00201666 TCONS_00241522 64 XLOC_139294 XLOC_023865 XLOC_065682 XLOC_081985 XLOC_134612 XLOC_043488 XLOC_017898 XLOC_103401 XLOC_077534 XLOC_034147 XLOC_132576 XLOC_073418 XLOC_006014 XLOC_140269 XLOC_076766 XLOC_120950 XLOC_132404 XLOC_046702 XLOC_083909 XLOC_108637 XLOC_022881 XLOC_079596 XLOC_131760 XLOC_055209 XLOC_146746 XLOC_093000 XLOC_134600 XLOC_112288 XLOC_021678 XLOC_142949 XLOC_122946 XLOC_029676 XLOC_059306 XLOC_020884 XLOC_137100 XLOC_128887 XLOC_015421 XLOC_050333 XLOC_146285 XLOC_009852 XLOC_010547 XLOC_124060 XLOC_049695 XLOC_154575 XLOC_135695 XLOC_037527 XLOC_156939 XLOC_147486 XLOC_006047 XLOC_042291 XLOC_135679 XLOC_053746 XLOC_151549 XLOC_149883 XLOC_042311 XLOC_012900 XLOC_110292 XLOC_129036 XLOC_115525 XLOC_011714 XLOC_062882 XLOC_101444 XLOC_123311 XLOC_148186 Coding TCONS_00199297 XLOC_120950 Coding Coding - 5:52191709-52202303 - TSS148865 10594 2 TCONS_00199297_16 246 0.997356994525203 1 0 7.58137662234331e-06 4.5709500844905e-06 1.50859918269286e-05 5.15447605757229e-06 2.61270012475878e-05 1.44083922175209e-06 1.07126839173431e-05 3.99851354029262e-06 4.02508615726357e-06 0.00194658926672753 0.00113326211853788 0.00100873277581426 0.000174603848474616 0.000523925289811087 0.000176060521583347 0.00107087662062686 0.000827235401425798 0.000438589560222871 4.62139430766382e-06 1.13662868135237e-06 4.36841893752722e-07 0.00067939034604349 0.00123098102064938 0.00144469202896198 1.59886214628149e-05 1.03719288208359e-06 4.52181104273732e-06 0.000815388960840174 0.000788135342394302 0.000920864451377278 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 1119 89.68 0.0785350198225411 TCONS_00199297_29 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-37 140 51.97 0.707865168539326 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 0.0234113698125944 0.613399459809878 TTGCCAAGAGAACACACTGGTCATAGCAAACACCCTCTTCCAACAACACAAGTGAGGACTTTACACATGGACATCACCAGATGGTCAATACTGAAATCAGATTGATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCAGCAAAAACAAGACCAGAAGCTGACTGTGGCTCAGATTATGACCCCTTATTGCCAAATTCAGACTTAAATTGAAGAAAGTAGAGAAAACCACTAGATCATTCATGTATGACCTAAATCATATCCCTTATGATTATGTTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGAGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAACACTTCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATAAAAGGAGCAGCCAAAGCGCTTTCTCTTGGACTCTCTCCTGCATGCGTGTGCGCACTCTCTCTCTCTCTCTCTCTTTCTCCCTCCCCATGCACTCCTCCACTCTCTTTTCGAGTCTTGGATTCTCCTGCTATCTTATAAATAAAATGGAGCTGTAACACTGATTTGCCTAAGAGCTGTAACATGGTTTGTCCAAGACCCGAGAGCTGTGATGTGCTGAGGGCTTTAATGTCCATTGCTCCAAATCTTTGTTGTGACGAGACAAAGAACCAAGGAACACACACTCGAGTGACATCTATGGGGCCGTGACTCGGATATAAACTGGCTGAAACAACCTCTGCGTAGAAGAGGCCAAGCACAACAGGAGCCCAACTCAGCGAAGCTCCCACACTAGAAGCGGAAAGCGAAGAAACCCAGCAAAGGGGAAGGCCCATCGTGCTGGAAACCGGGACAGTGAAAAACGAACTCAGCAGAAAGCTCACGCAGCCCAGTCTCAGATTCCAGAAGACCTCCAGTTAAGGTAAGAGGTCCTCGCTCCAATGGCTGGAGGGACCTTTACAATCTCTCGTTTCTTGTTTCCTTGAACCTCCTGCGAACAGGTGGGCGGCAGGGGCACAATTGAGGGACTCTGGAGAGGCTACTCCTCAGCATGTCCCAAAGGCTCTATCTGCTGAGTCCCAGTAGCTGTTACCCAAGCTGGTGGGGGTTCTTCTGTCCTTTCTCTTCTCTGTGCCAAAGTTCAGACCAATGAAACTGTGAGCACCGGTCAGATATTTAGCAAATTTTCTGGCGGGCTATGAAGGGGATTCCTTGGCATGTTTTTCCCACTGCTTTTTCCTCCTGTCCTTCAGCTCTCTCCGGGGACTCAAGCCCAGCCAAAACTAGTGAAACTCAGGCTCTGATGTCTCATTGCAAAATTTCAGAGAGACAAAGCGATAAGAGGTAGATTTGTTAGGGTCCAGAGAGAAGCCACTCTTCAGGGTGTGAACCATTGCCAAGGGCAAGGGCTGCGGCCATGGTATTAGGCCTGGCTATGTTTTGTGAGGGGATGGAATTCATATGCTAATGAGTGAGAGGATCATCCCAGCCATTGGGGAACCACCCACTCCTCCCTCTTTTGACCTTGTGCCTTGGAGCTGTCCTGCCACCTCTGGGTGTGTCTGTTGGTTTATAGATTGGGGATTAAGGTTTACTTGAATTTGACTTGTCATCTTGGACCCAATTGATTTTAATTGGTTTACGTTATACCCTTGTGCTATGTCATTCTTTCAAAGGTTGTGCTCTGCCCCCTTCCCTCCTGTTTCATGCTCTTTTCCTGAGCCCCATCCAGACCCACAAGGCTGCCCCTACAATCTTCTAGAGAGACAACCAGAAAATAGTTGGGAAATACTCTATAATATCCAACCCCTAATCCTACCCAATACTGGTCACACTGGAGCTCTTGGGTACGCCCAAACTCCAGTCCGGGGAAGGGGGGTGGTCCCAGGAGGTCATCACGCCTTGACCTGCCTAGGGATCGGTCTTCGAAAGGTTGTCACGCCTCAAACTGTTCAGGGATCCTTTAGTCCCAGGGGTCCCAGGAGGTCGTCACACCTCGACCTGCCCAGGGACCCAATCCTCGGGAGGCCGTCACGCCTCAGCCTGCCTGGGGATCTGCACCCTGACCCGGGGACGCCTGGCTCTCAGGTTGCAACAGTTCTGGGTAGGATAAGCTTCAGAAAGACTCACCCCTAAGGAAGTCCAACCATGGAAACATAAAGAAGCCTATTACTTGTGGGAATGTGCCCAGTCTCAGCAATAACTCAGGAGCCCAATGAGAACCCCATTGCCTTTCTGGAGAGGCTTAAAAGAGGTACTCCAAAAGTTTACCAACCTGGACTTAGACTCTTACGAGGGATGGGTGATTTTAAAGGACAAATTCCTGTCCCAATGTGCATCAGATATCAGAATTAAGTTACAGCAGCTACAACAGCAGGACCCTGCTGCCTCTTTAGATGAGATGGTCCAGACAGCCACCAATACCTTTTATAACAGAACAGGAGAAGGAGGCCAAGGCCCAGGAGAAGGAGAGAAAGAAAGAGACAAGGCATGCCCAGATGCTGGCCGCCCTCCAGAGAAGCCCTATGGCAAACCCCGAGTCCTTGAGGGACAAGGCATGAGACAGATGCCTGATCTGTAGACAGGCGGGGCATTGGGCCAAAGAGTGTCCAAACCATGACAAGTCTCCTAGAACAGCTTGCCACAAATGCCATCAACTGGGACATTGGGTGGCATCTGCCCTTGGGACCCAAGAGCCTCAAGGTCAAGCGCCAAGCCTACCCTCACGATGGTTCAAGAGGACTGAAGCGGCCCGCTCCAGCCAGCCCGCCTGTCACAGATAACCTTCACGGGGCTGGAGCCAAGGGTGCAACTGGATGTGGCAGGTAGGTCCGAGAATTTCTTGGTTGACACAGGGGCTACCTACTCTGTCTTGATCTCCTACTCCAGAGCCTTCTCCTCCCAAACCTGTACCATTTTGGGTGCTACAGGAAAAGCAACTACTAAAAGATTCACCCAAGCACTTCTTTGTTGCTGAGATGGACAAATATTTTCCCACCAGTTTCTGGTGGTCCCTGAGTGTCCTACCCCCTTATTGCGAAGAGATATACTCACTAAACTGGGGACCACCCTTGTGATGGGAAGTTTTACAGCCCCTAGAACTCTACAGCTCCGGGTTACTACTGAAGAACCCATTACACCTTCAATAGAGAGGGACCAAAAACTATGGGAAGACAAAATTAACCCCCAGGTGTGGGATCAGGGGATTCCTGGACGAGGCCACCAAGCTGAACCAGTCATCATTGTCCTCCAAGATCCCACTCGGTTTCCTAACCGGAAACAATATCCTCTCAAAAGAGAGACTGGGGACTTACCTGGGAGTTCAGATTACACACGGGTCCAGGAGGCTGTCCTCTGATCGGGTACAAGGAATCCTCCAGTTGCCCTCCCCCACGACTCGAAAACAGTTGCGAGCTTTCCTGGGGCTAGCTGGTTATTGTAGAATCTGGATAACCAACTATGGTCTAATTGCCCAGCCCTTATACGAAAACTTAAAGGGACGAGATGATTCAATCCCACTGATGTGGGGAACTCCTCAAAAGGAGGCAGAGGCTACACTAAAACAGGTCTTAACTCAGGCACCTGCCTTGAAATTGCCAGACCCAGAAAAAGCATTCTAACTTTATGTCCATGAAAGAGAGGGAATAGCCTTGGGAGTGTTAACTCAAAGGTTGGGATCTGAGCCCCAGCCTGTAGCTTACTTATCCAAGAGGCTCAACCCAACTTTCCGAGGTTGGCCCCCCCTGCCTTCGAAATCTTGCAGCTATTGCAATCATGATAGAAAATGCTTTAAAACTCTCCTTTGGGGGCAAACTAACTATTTTTACCAGCCACCAAGTAAAACAACTCCTAAATGGGAGAGGCCATTTATGGATGTCTGATCAAAGAATCCTCAGATATCAAGTAATGCTGATGGAAAATCCAGGCCTCACTATATCCCCTTGAGAGGTTCTTAACCCAGCCACCCTCCTATCTACCCCCGAGGGCTCTCTCCCATTTCACTCTTGTCTAGAAACCTTGGACCACTGGACAAAACCCCTAGAGGGATTGTCAGAAGATCCTCTGACCAATCCTGAGGAAATCTGGTACACTGATGGAAGCAGCTTTGTCTTGGATGGAAAAAGAAGAGCCGGGTATGCAGTAGTCTCCAATTTTGAGACCATAGAGGCTAAGCCTCTGCCACCAGGTACTTCAGCCCAATTAGCTGAGCTCATAGCCCTGACTTGAGCTTTAGAGCTGGGAAAAGGAAAAAGAATAGCCATTTACACTGACTCCAAGTATGCCTTTCTGGTGCTACATGCACATGCGGCTGTTTGGAAAGAAAGGGGCCACTTGACCACCTGAGGGTCCCCAATCAAATATGGTGATCAGGTTCTTCGACCCTTGGAGGCAGTCCACCTGCCTACTGAGGTTTCAGTCTCCCACTGTAAAGGACACCAAAAAGGGAACACGGAAGTGACACAAGGGAACCAAGCAGCTGATCAGGCAGGTAAGATTGCAACATTACAGAACCATGACCTAATAGGGATTGCCACCTTAGTTCCACAGACTAATTTGCCAGAAACTCCTTCATATACTGAAGGTGAGACTCTTAAAGCTAAGAGCGAGGGCTTTTAAGAAGATCATATGGGGTGGTTCCAAAAGGAGGGACTCCTTTTTCTGCCTGGAAACCTCCAATGGAAGTTGGTTAACTCCTTACATGCCACTACTCATTTAGGAGAAAAGGCCCTCCAAAGATTACTAGAAAGGTCCTTCAGAGGAACAGGCCTCCAAATAACTATAAGACAGGTGGTCTCCTCTTGTCCCATTTGCCAATTAAATAACCCTCAAGGAGCTTGAAGACCCCAGCTGGCCCAGCCCGTCCAACGACGTGGGGCCTACCCAGGAGAGGACTGGCAGATGGACTTCACCCAGATGCCAGTTTCTCAAGAGTATAAATACCTATTAGTTATGATAGATACATTCACAGGATGGATTCAAGGCTTTCCCACCCGGACCGAGAAGGTTGAGGAGGTAGTTAAAAAACTGCTCCATGAAATCATTCCAAGATTTGGTCTGCCCAGGTCATTACAAAGTGACAATTGGACATCATTTACTTCTAAGGTCACCCAAGGAGTCTCGAAAGCATTGGGCATTACTTATTATCTCCATTGTGCCTGGAGGCCTCAATCTTCAGGAAAAGTAGAAAGAGCCAATCAATTCTTAAAATCAGCGATAAAAAAGATAACCCAGGAGACCTCCCTGGGATGCAAGGAGGCTTTACCAATAGCTCTCCTCCGCACCCGCATTGCCCCTAAGGAACAGGTTGGTCTTAGTCCTTATGAGATGCCATATGGGAGACCTTTTGTTTATGTTAATGACCTCTTCCTAGATCCAGAGGTTCAGATCCTCCAGTCTTATACCATGGCCATTGGGCAATTCCAACAGGATATACGCTTGTGGGGTATGAACCAGGACCCAAAAGATTCTAAAGAGTCACCACTATATGCTCCAGGAACTCAAGTCCTAATTAAAGTCTGGAAAGATGGGTCCCCAAAGGCTCAACTCCAGCCCACATGGAAGGGCCCCTACCCTGTAATACTTTCTACCCCTACAGCAGTCAAGGTACCAGGAAATGACTCCTGGATTCACTACTCATGAGTCAAGCCATGGAAGAAAACAGAAGAGGACACTCGATACACCTTTGAGCCCCTGGGAGATCTCAAATACCTATTCAAAACTACCAATGAGTGCCATTCTAATGAAGACCCCCCAAAATCTGGTTTCTGGGGATAAGATTTCTCAGGATAACTCTAAGGAGCCAACACAGCTTGACAGAGACTGTACTCCAAGACAGACAGGAAATAGATCTTCTGATCCCTGAACAAGGAGGGACTTGAGCTATCCTGGCGATGTGAATTTAAAATTGACCAATGTCCCTACTAGTCCTTGTTATGCTATATTGATGATGCTTATGATTATTCTATGTACTGTCAATTGTCTAACCTGTTTTGTCTCTGCCCAGGTCAACCAGCTACAACATGCAGTGCCAGTTCTACAAAGATATAAAACTACAGCTGACCATGGAAAATATCAAACACACCCTTGGACACCGCTATAAGGACTCTGAGGCTTGAGACTAGCAAGAGGGTGAGGCCCAATACCCCTCGCCGCCCCAGTTCAGCAGGAAGTAGCCAGAAAGACCTCGACGCCCCTATTCCCAAAGAATTGGGCCTCCCATCTCTTGAGGGGGAATGTTAGGTAGGTAGAATAGGGAAAAGGAGTCCAAAATGGAGGTGGCTAAAAGACAAGGAAGGTCCGAGGACCAGAGTGAAGACTTCAGGCAGAACAAACAGAACAAACAGCACTCCTGGCTAAGCCCAATTTGCATAGGGCAGGCCCAGGTGGAGGAAAAAACATATAAAAGGAGCAGCCAAAGCGCTTTCTCTCGGACTCTCTCTCCCGCGTGCATGCGCGCGCACTTTCTTTCTCTCTCTCTCTTTCTCCCTCCCCACGCACTCCTCCACTCTCTTCTCTTTAAGTCTTGGATTCTCCTGCTATCTTATAAATAACATGGAACTGTAACACCGATTTGCCTAAGAGCTGTAACACGGTTTGTCCAAGACCCGAGAGCTGTGATGCTCGGAGGGCTTTAATGTCCGTTGCTCCAAATCTTTGTTGTGATGAGACAAAGAACTGAGGAACATACACTCGAGTGACAATTATACAGTAGAAGTGACAAATAGATTCAAGGGATTAGATCTGATAGACAGAGTGCCTGAAGAACTATGGACGGAGATTTGTGACATTGTATAGGAGGCAGTGATCAAGACCATTCCCAAGAAAAACATACAAAAAAGCAAAATGGTTGTGTGAGGAGGTGTTACAAATAGCTGAGAAAAGAAGAGAAATAAAAGGCAAAGGAGAAAGGGAAAGATATACCTATTTGAATGCAGAGTTCCAAAGAATAGCAAGGAGAGATAAGAAAGCCTTTCTCAGTGATCAGTGCAAAGAAATAGAGGAAAACAATAGAATGGGAAAGACTAGAGATCTCTTCAAGGAAACAGAGATGACAAGGGAAAATTTCGTGCACAGATGGGCATAATAAAGGACAAAAATGGTATGGACCTGACAGAAGCAGAAGTTATTAAGAAAAGATGGCAACAATACACAGAAGAACTATACAAAAAAGATCTTTATGACTCAGTAACCACCGTGGTGTGATCAGTCACCTAAGCCAGACATCCTGGAATGTGAAGTCAAGTAGGCCTTAGGAAGCATCACTACGAACAAAGCTAGTGGAGTTGAAGGAATTCCAGTTGAGCTATTTCAAATTCTAAATGGTGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTCATCAGTGGCCACAGTACTGGACAAGGTCAGTTTTCACTCCAATTCCAATGAAAGGCAACTCCAAAGAATGTTCAAACTACCACACAGTTGCAGTCATCTCACACGCTAGCAAAGTAATGCTTGAGTAATTCTCCAAGTCATGCTTCAACCATATGTGCACTGTGAAATTCCAGATGTTCAAACTGGATTTAGAAAAGGCAGAGAAACCAGAGATCAAATTGCCAACATCTGCTGGATCATTGAAAAAGCAAGAGAGTTCCAGAAAAACATCTACTTCTGCTTTTTTGCCTACACCAAAGCCTTTGACTGTGGATCACAATAAACTGTGGAAAATTCTGAGAGATGGGAATACCAGACCACCTGACCTGACTCCTGAGAAATCTGTATGCAGGTCAACAAGTAACAGTCAGAATTGGACATGGAACAACACATTGGTTCCAAATAAGGAAAGGAGTACATCAACACTGTATATTGTTACCCTGCTTATTTAACGTATATGCAGAGTTCAGTTCAGTTCAGTCGCTCGGTCATGTCTGACTCCTTGTGACCACCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAAGTCCCAGAGCCTATCCAAACTCATGTCCATTGAGTTGTTGATGCCATCCAGCCATCTCATCCTCAATCGTCCCCTTTTCCTCCTGCCTCAAATCCCTCCCAGCATCAGGGTCTTTTCCAATGAGTCAATTTACATGCAGAGTACATCATGCCAAATGCTGGACTGGATGAAATACAAATTGGAATCAAGATTGCCAGGAAAAATAACAATCACCTCAGATATGCAGATGACACCACCATTATGGCAGAAAGTGAAGAAGAACTAAAGATTTTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAATGTTCAGAAAACTAAAATCATGGCATCCAGTCCTATCCCTTCATGGCACAAAGATGGGGAAACGATGGAAACAGTGAGAGACTTCATTTTTGTGCTCCAAAGTCACTGTAGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTGCTCCTTGGAAGAAAAGCTATGACCAACCTGGACAGCATATTAAAAAGCAAAGCGATTACTTTGCAACAAAGATCTGTCTAGTCAAAACTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCTGAAGATTTGATGCTTTTGAACTGTGATGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGAAAGGAAATCAAACCAGTCAATCCTAAAGGAAATCAGTCTTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAGCTCCAAAACTTTGGCCACCTGATACAAAGAACTGACTCTGAAGAGACCCTGATGCTGTGAAAGATTGAAGGTGGGAGGAGAAGGAGGGACAACAGAGGATCAGATGGTTGGATGGAATCACCAACACAATGGACAAGATTTTGAGTGAGCTCTGGGAATTGGTGATAGACAGGGAAACCTGGCTTGCTGCAGTCTATAGGGTTGCAAAGAGTCAGACACCACTGAGTGACTGACCTGAACTGAATTTATCTTGCTCAAGGACATGTTTCTCCTTCTTAAGAACCTTCTGACTAATCGTGTTATCTTAAAATGTAAGTCATGAGAATGGCTCTATTTTTAGTAACCAATTGAAAAGGTATATAAGGCTTTGAGAACACTGGGGAGTGGGGCACTCTCTGTCCCCTTCTGATGTCTGTGTCAGAAATTTTCCTTATCCTTTTTATACTTTAATAAAACTCTGTTACATGAAAGCTCTGGGTGATTAAGCCTTGTTCCTGGTCCCGAAGCTAAATTCTCTTCCTTAGAAATCACAAGTCTGACACTGTTCACCATAAGCTATCATCTGTGTACATACATACAATGGAATATAACTGATTATTTAGGAGGAAATTCTGTCATTCATGACAAGGTATATAGACCTTGAGGGCCTTATGCTAAGTGAAATGTCAGACATAGCATACTGTATGATCTCACTTATATATGGAATCTACAATCAACCAAACTCAGAAACAGACAGCAGATTGGTCATTGCTAGAGGTGGGAGAAATCAGTTCAGTTCAGTTCAGTCGCTCAGTCATGTCCGACTCTTTGCTACCCCATGGACTGCATCAAGCAAAAAGGGAGAAGACTCAAATCAATAAAATTAGAAATGAAAAAGGTGAAGTTACAATAGATTACACAGGAATACAAAGGATCATAAGAGAATACTATGAGCAACTTTATGCCAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAAGTATAACCTTCTAAAACAGAACCAGGAAGAAATAGAAAATATGAACAGACCAATTACAAGCACAGAAATCGAAACTGTAATAACAAATCTTTCAATAAACAAAAGCCCAGGGCCAGATGGCTTCACCAGCAAATTCTACCGTAAGTTTCAAGAAAAGCTAACACATTCTCTGCTCAAACTCTTTCAGAAAATTGAGGAGGAAGGAAAACTCTCAATCTTATTCTGCTGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCCGACTCTGTGATACCCCATAGACAGCAGCTCACCAGGCTCTCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGGAAGTGGAAAGTGAAAGTGAATTCGCTCAGTCGTATCTGACTCTCAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCATCCATGGGATTTTTCAGGCAAGAGTACTGGAGTGGGTTGCCATTGCCTTCTCTGCAATCTTATTCTACAAGGCCACAATCACTCTGATACCAAAACTAGACAAAGATGCCGCCAAAAAAAAAAAAAAAAATACAGGCTAATATCACTGATGAGCATAGATGCAAAAATCCTCAACACAATTCTAGCAAATAGAATCCAACAACACATTAAAAAGATCATATATCATAATCAAATGCATCCCAGGGATGCAAGGATTCTTCAGTACAAGCAAATTAATAAATGTGATTTGTTAATTTGTTACCAAATTAACAAATTGAAAGATAAAAACCAAATGATTATATCAGTAGATGAAGAGAAAGACTTTGACAAAATTCAACACCCGTTTATGATAA TCONS_00191839 . 3' 25666 TCONS_00191839 . 3' 36259 EMBV3_07341 ATGATTCCTGTCTTGCAGGTGGATTCTTGACAATCTGAGCCATCAGCGAGGCCCACAGCT Gene BVV0102_342235 - 0 NULL GK000019.2:43832548-43945991 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097165 1 XLOC_058184 NonCoding TCONS_00097165 XLOC_058184 NonCoding NonCoding - 19:43862023-43939080 - TSS72059 831 2 TCONS_00097165_1 36 0.61251504211793 2 0.989241590531561 0 0 0 0 0 0 0 0 0 2.47562652805529e-06 1.65284314926711e-05 4.30285250853293e-06 1.20848424363148e-05 0 0 0.000328423203437363 0.00121869963544333 0 0 0 0 0.000464349889384073 0 4.03482083625793e-05 0 0 0 0 5.48953211643032e-05 8.46722181552135e-05 XR_228741.1 LOC101908038 PREDICTED: Bos taurus uncharacterized LOC101908038 (LOC101908038), 0.0 809 100.00 0.537906137184116 0 noncoding 0 0 0 0 0.15648193533405 0.333317050202264 0.0308783205553723 0.570575602401811 ATATTTTACAATTTTTAATACTAAGTCTTTGAAATCCCATGTGTGTTTTCCACTTTCAGTACCTCTGAATTGGGCGGAACCACCTGCCCAGCGATCCCTGGCTGCATGTGGCTAGTGGCTGTGACAGTTCAGATCAACATAATGTTTCCTGCTGTTTAGTAGCTAAGTAGCGTCCGACTCCTTGGGACCCTGTGACCCGCCAGGATCCTCTTTGTCCATGGGATTTCCTAGGCAAGAATTCTGTCACGGGTTTCCATTTCCTCCTCTAGGGGATCTTTCCGACCCAGAAATCGAACCCATGATTCCTGTCTTGCAGGTGGATTCTTGACAATCTGAGCCATCAGCGAGGCCCACAGCTGAGGAGGAAGGGCACGGAAACGAGGGCCTAGGCGGAGGGAGCTTTCGGTAGGAGTCCGAGGATCGGTTTGGTTCGTAGAAGCACCGAAGGCTCCCTCCGCCTAGACCCTCGTTTCCCTGCCCCTCATCAGCTGTGGGCTTCGCTGGTGGCTCAGATTGTCAAGAATCCGCCTGCAAGACAGGAATCACGGGCTCGATTCCTGAGTCGGAAAAATCCCCTAGAGGAGGAAATTGAAACCCACGACTGTGTTCTTGCCTAGGAAATCCCATGGACGCAGGAGCCTGGCGGGTCACAAGGACCGAAACAGCTGGACACACAGACTAAACAACAGGAAACATTCTATTGATCTGAGCCGTCACAGCCACTAACCACATGCAGCCAGGGAACTCTGGGCTGGTGGTTTCTCCCAATTCAGAGGTACTGAAAGTGGAAAAAACACATGGGGATTTAAAACTTAATATTAAAAATTGTAA TCONS_00093993 TCONS_00093994 TCONS_00093995 TCONS_00093996 TCONS_00093998 TCONS_00093999 r 3' 41181 TCONS_00094005 r 3' 2719 EMBV3_26102 TCATCCGCAACAGCAAGAAGATGCAGAGCTGCGCGAGATCCTCCTCCAGGGCCGCCTCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27737 TGATCATGAAATACTTGGGCCTGAAGCTGGGGCCTGCGCTGAAACTCTGCTACCATATTG Gene GeneID:535263|SCML4:NM_001102184:53_cdna Constitutive 0 NULL GeneID:535263 9 GENE SCML4 MGC152258 sex comb on midleg-like 4 (Drosophila) EMBV3_42328 GTCTCTCTCGTATTCATGTTGCACTTTGTGGAAGGCTTACCCCATAATGACTTGCAGCGC Gene GeneID:788351|USPL1:XM_002691811:467_cdna UTR3_Alt 2 NULL GeneID:788351 12 GENE USPL1 NULL ubiquitin specific peptidase like 1 EMBV3_13586 CTCTCTGCAGCAGGGTCAGGTGTTACCCTGTCTACCTCACCATTGCCCTCGAAGAGTTGT Gene GeneID:522307|POLL:XM_002698440:424_cdna Constitutive 0 NULL GeneID:522307 26 GENE POLL NULL polymerase (DNA directed), lambda EMBV3_18351 TGGACCAGGACCCTTGCACACCCTTTGACACAGCATAAGAGCAACCCCTTTTGGAAGTCT Gene GeneID:280758|DBH:NM_180995:467_cdna Constitutive 0 NULL GeneID:280758 11 GENE DBH NULL dopamine beta-hydroxylase (dopamine beta-monooxygenase) EMBV3_04959 CTGCTCGGACCAGATCGCTTCAAACATATCAACAACTGTGCCAGAAATATTCTAGTGGAG Gene GeneID:517248|IMPACT:NM_001102501:22_cdna UTR3_Alt 3 NULL GeneID:517248 24 GENE IMPACT MGC152516 Impact homolog (mouse) EMBV3_24985 GATGAAAAAGCAGGAAGAAGGAAATACGACAGAAAAAGCTGTAGAAGATTCAGGAGGTGG Gene GeneID:281975|PDE6C:NM_174419:45_cdna Constitutive 0 NULL GeneID:281975 26 GENE PDE6C NULL phosphodiesterase 6C, cGMP-specific, cone, alpha prime EMBV3_24020 ACCCTCGGCCACAGAATCCTATGTCACCCGCTGAACCCAGGTAACCACATCTCTAGTTGA Gene GeneID:540944|TRAF1:XM_002689959:11_cdna Constitutive 0 NULL GeneID:540944 8 GENE TRAF1 NULL TNF receptor-associated factor 1 EMBV3_19351 CTTTGTCCCAACCCTGACGTCGTGGACAATGAAACTGAGGACCTGAGAGACAAAGTGACT Gene GeneID:514339|SLC6A12:NM_001101994:22_cdna Constitutive 0 NULL GeneID:514339 5 GENE SLC6A12 MGC139335 solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 EMBV3_39071 AACTCATCAGTTCAAGTATAAGAGGCCGCGACAGCCATTGGCAAAATGGGCTTCCCGCTG Gene BVT0102_039108 + 0 NULL GK000023.2:28231253-28257732 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134682 1 XLOC_081483 NonCoding TCONS_00134682 XLOC_081483 NonCoding NonCoding - 23:28245310-28250381 - TSS100335 4991 2 TCONS_00134682_8 119 0.189340813464236 2 0.0159763313609468 0.00108496744143424 0.000432861127703471 0.000947463403233361 0.000635580549173457 0.000988227953833468 0.000135456685650146 0.000595906871002634 0.000507212150792397 0.000638672252859568 0.00034706507763506 0.000570116105192741 0.000359646037971411 0.000494980346129909 0.00101695625377004 0.000440388203154847 0.00300576659276954 0.000535556722176793 0.000698783553898283 0.000471260744397279 0.00105904738144625 0.000408737860789189 0.0013054205046997 0.000744437475842817 0.00155856459471584 0.000728800890282143 0.00116601115348151 0.000686756206434318 0.000450332881482572 0.000530106285758044 0.000655311777899009 NM_001103272.1 GNL1 Bos taurus guanine nucleotide binding protein-like 1 (GNL1), mRNA. 0.0 648 99.18 0.0733319975956722 XM_005274939.1 GNL1 PREDICTED: Homo sapiens guanine nucleotide binding protein-like 1 (GNL1), transcript variant X1, mRNA. 0.0 2105 73.37 0.712282107794029 0 noncoding NNCCTCCCCAGCCCCTGCTGTAGGAGAGGCAGAAGGGTGTGGGCTTTGTGGCCACACTGTGTGAGGATTCGGATTCTGCCCCCATCGGCCAGCTCTGTGTGACTAAGTAGGTCTGAGATGACTTTCCAATCTGCAAAACCAGGGTGCTTAGTTGCTCCTGGCAAGGAGGTGGTCAAGATGGGAGTTAATGTGTGCAAAGCTTCTGTTCTGTGCCCAGCACAGGAGAGGGTGAATGAATGAGCGCACAAATGAATGCCAGCAGCTATAAAATGGTTGTCATTCTTAGTCTTTGCCTCTTCCCCATCTTTGCCTGGCGTTAGTTTCTTGCTCAAAACTCTCCACCATTCTTTTTCTGTTTCGGTTCCCCAGGCACCTGGGAGTCCCATCCAGAGACCATGGAGCTGGTGGTTTTGCAGGGCAGGGTGGGGCCAGCGGGTGACGAGGAGGAGGAGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGGAGGGAGAGGAGGACCGGGATGCGGATGAGGAGGGGGAAGGGGATGAGGACACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCCGCCCGAAACCCTTACGCCCTGCTGGGCGAGGACGAGTGCTGAGTCCCTGCCCTACTCCATCTCCCCACCTCCCCAGTATCTTTGCTTTTGGACTGACCCGGGGGTCTCTCCCGTCTGCCGCCCCAGTTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCTAGATGGACTGAGGTGAGAGCAGCTCTCAGGCTGACAGCTGTGGGAGGCTGGCTGCTCTTCTCCCTTCTCTTTTCGTGCATTCTCTTTGCAAAAGAAGAGTTCTCTTAGGAGTTAATTCAGTGGGTTCTGAGGCCCAAAACCACTCCCTCTGCTCATGCTCCCACTTGTACCTTAGGAACTGTGTCATCAACATGGTGAGGGGAGGTCATTTCAGGCTTCTGAGGCCTGGTCAAAGTCCAGTCCCCTTTGGTCCCTCTGGTGTTGGAACAACCCCTATGCGCCCCCTGCTGTCAGTCCTGGGTTATACCAGGAACTTCTGGGAGAAGCAGCAGTAAGAGATGTCACAGCTGATGTCTCCAAGTGAGATTTTTTAACAGGATTTATTCAAATTCAACAAATATTTATTGAGGTCTAACTGTGTCTAGACTTACGCTAAGCACTGAGCATATAAAGCTGCACAAACAGGCCTGACCTAAATATACAGCCTGGCCATGATCAAGACCTCATTAATCAGGCACCCAACTTTTTGAATTAAGATGGGTGTATAATGTTCTCCAAATCCTTAGGGCTCATACGGTATAATTCTAGAACTTCCTGTTGGTGGAGATACTTAGCTAAGACTTGATGCTTGTGAAAATGTTAATTAAATGTGTACGAGTAGTCTTAATTACTGGCAAATAAGTGGGGTGCACATTTATGATCTGAGCAGAAGAGCCCTGTAAGTGCAGTATTAAGTCTCATTATAGAGCTTTAACACTAAGGGTCTGCTAGATTCAAATGGGAGGACACACACCCAGCCTCCTGAATCCCATTTACCCTGGTTTGGGATGGAGCCAAGGAGACCCAGTGCATGGTCTGGGCTGTCTTATGATATCAGGTGCAATTCAGCAGAGGTCAGCTCTTCTGTGAGTCAGGGCGCTTTAGGCCTTGCTGTACATCCCCCTTGATAAGCAAGCAGCTGGACTCCTAGATTTCATTCTTGGAGAAAAGGAAGAATGAGCTTTGGTTCATTGGCTGCCACAATGTTGTCTGGGTTGGTGGTAGCAAAAAGTGTTATTTGATAGGTTAGCCATCCGGGGTAGGGGTGAGGAGAAGAGGGCGTATGATTCCTCTCTCTAAAGCGTTCTGTTCCAGTTCTGGGTCTCAGGCTACTTTTCATTCCAGCAGAGACCCAGTCACCCCAGGAGCAAAAGGGGCTGAGGTGAACTGGCCCATATTTGGGTCATTTCTTCCAGCTCCCTCCTCCTCTGGTGCCAGTGAGGACATAAGCCCTGGAATTTGCATTCCAGCGCAAAGTTTAAATACAGCATGTGAATGTGTGCGAAAGTTGCCCACAATGTGCTGTAAAAGAGAAAAAGTTTCAGTGGAGAGAAAAACCCACCTGTCTCCCATCTTGCACTTTGTACCCTCAGGGCTAGGTCTGTTGACAGAAAAAGGGGGACCCTTACTGAGCATCCTGTGAAGGTTCGTAATGGTCAGGGAAGCTCAGGGGACTTCTCTACTGCTGGAGGTGAGATGGGGACATTGGAATTGTCTCAAAAAGTAGAGAAAAGTGAGAAAAATCAGAATTCTATTTAAGCCCTTGTCTCTGTGCCACTTCTCTTCACTTGTCTTTATCTTGTTCTATCTTATGAGTTTCACCAGGAGCATTTGGGAGGTCTGGGGGTGGAGGTGAAAGCTGAGACCTGATGCTGGAGGGGAAGCCAAGGAAGAGGGTTTTTATGCTGAAGACCTGGATGGAAGCAGTGCTAACATCCCCAAGAGGCTAGAGATGGCAAATGATTCTTCCCAATCAGTACTCTGTAGGAAAGTGACACTGGGAAAAGAACTATCTTAGCAACAAACAGATTTGGGAGGAGAAGGGTAAATAATAACCCAACACCAGTGTCTGAGGTGGAAACTGACTAAAAGGGGACAAAGGAAACCAGGGGTCCAGTTCTGAAATACCCAGGACTCCTGTGCTCACACCCCTCCTGGGACATATCCACTATGGAGACACTTGACTGTGGAGGTCTCAGGCTCTGGGAGTTTGCACAGCTGGCCAGTCTCGTCTCTTGATGGCCAGAAACTAGTACTTCTTATTCATGCTGTAATTCCATCTAGATGTTGAGCAAGTTCTTCTGAGCTTTCCTTTTTCTAGACTGACTTCCAGTCATGGTTCTGGGACAAAGTAGCTGTGTGTGGTCCAGAGTAGATCATTGATACAATCAACAACATTGGTTGAAAACAATGTGTGTCAGGCATGCTGAGTTCTGGGACAAAAACACTGAGTACAGGCATAGACCGTATCCTCCAAGAACAGAACAGCCAGATACTAATGATACTACTCCATGTCACCATGTAAATTATAGAAGAATTGCTGTACGTGAGTATTGAATTGTAACTAAGTAAGGTGTCTAGAACTATAATCACCCCAAGAATCCATTCACCAATTGAACATTTGTCCATTTGTCAACAATTACTATTTGTCAGTCACTGCTAAGTGGTAAGTGATACAGAACTAGTCCTTTGTGGAACTCTCAATTTATTGGAATATGAAAACAATTTAATAATTACCCCAAAAGTGTGATAAGTGCTGTGAGAAGGGTGGTACAGGGTTCTGTGGGGTAGTGGTGGCTTCATGTAGAAGGGTCTTGTGATGTTGCTCAGAAAGAAGTGGAGGACAGAGCTGGAAGCTGTTGATTGTACAGCAAGTTATATAAGACTGGGGAAAAAAAAAATCAGTGGTCTGTGGTAAAGAATTGCTGTGGGAACACCCAACAGGGGCCAGTCTTGGTGAGTCAGAAAAAGTCTAGAGGGACGGAGGTCCAAGCTGAGGCCTGAAAACTGAGCAGGAGTTAGCCAGGCATTGAGAGGGAAAGGGCATTACAGAGGGGAAAGCGAAGGATAGGAACAAGCACGTGACAGTTGGAAGACTTAACTGGTTCAGCATGGCTGGGGCAGAGGGTGCAAGGGGGGAAAGGTGAAGCTGGAGAGGTAGGCTTGGGTTAGCTCTTCCTGGGCCTCATCAGCCGTGCTAAAGATGAAGGCTTTATCCAGAGCGGCACTGAAGAACTTCAAGCCTAAGACCAAGGAGGAGAGATTTGTGCCTTAATGTCAGTTTGGTTGCACTGTGGAGACTGGTTTGGAAAAGGGAGAGCGATCAGAGACTTTTGCAGAGATCCCAGACAAAGACTGGAAACCAGAATTAAAGGGCTTGGGGGAAGAGAGGTGTGGCTGCAGACGGATTTGGGCATCAGTAGCATACAGGGAAAGAGGAACCAGTAGACAGGATAAAACCTTGGAAGTGTGGTGCACTGAAAGCCAAGGAAGGAAGAAGGAAGGGCACAGTGAATGCTGCTGAGGGTTAATGACAAGAAGGAAGAATGTCCACTGGGTTTAGTAAAAAGAAGCCTTGCTGGTCTTGGTGGGAGCAGCTGCATTGGGCAGGTGGGATCAGAAGTGCCAGATGTCAGGGGATTGAGAATAATTTGGAGGAAAGAAGTGAAGGCAGTGGAGAAAAGGAGATACTTTTTAAAGAAGTTTGGTTGTGTTTGGAAGGAGAGAAAAATGGAGAGAGCAGAGTATATAAAATCGAGAAAAAAATTTGCTTTTAAGTTTTGAACGGTTTAACATACTGTTTAGAAGGGTTGAGTGGAGGAGGAAAGGCTGAAAATGCAGGAAAGTGGGGATTAGTGATGGAACAAGCCCTGGAGAGCGGGCGGGGGCGGCACTGACAGTCCCGGCGCAGGGATTACCCTCCCACGGGAGCCTGGTGGCTTCTGTCCTAATCGGAGGAGACAGCGCTGACATTCAGCCGGTTTGCACTGGTACTGTTCAACCAGTTGTTAAAACACTTCTGTACCAGTTAGTAAGTAGTATAAGAGTAACTGCAATAAGCAGTAAAAATGATTAATAAAATACGTTATAATATGAACTCATCAGTTCAAGTATAAGAGACCGCGACAGCCATTGGCAAAATGGGCTTCCCGCTGTACCTGAGACGCTTTGCAGCGCCGTCTGCCGGTGGGGTAGCGTCACTGCAGGCTAAGCGGCTGCTTTGAGCCTTATTAAACTCTTTAAAATTGCCTGTTCAAATTATCTTTGAATTATGGAGTTGCTATTGCTTCTAAATAGTTTAGCTTCTGCTTTGATTTTCTTGCTAGTACATTGTCATTCTTGCATCAGTAGTAAATAGCAGTGTTTTAATATTTACAAATTTAAGAGTTTTTAATAAACTATTAAAGCCAAACTTGAATAAAGAGATAAAGTTTGAATG TCONS_00134683 TCONS_00134684 TCONS_00134685 s 3' 10819 TCONS_00134683 TCONS_00134684 TCONS_00134685 s 3' 6757 EMBV3_30715 ACTTTGAGTTCATAGACAGCCTCCCACCTCCTGACTTCCTCCCCTAGTCCCCAGCACCAT Gene BVV0102_425448 - 1 EMBV3_28837 GK000019.2:19371103-19457480 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34881 CCATGGATTTGGTTTCGAGTCACCTGGGTGCTGATGGACAAAAGCTCGGAGAACAAGCAG Gene GeneID:618672|MGC142811:NM_001076951:315_cdna Constitutive 0 NULL GeneID:618672 25 GENE MGC142811 NULL hypothetical protein LOC618672 EMBV3_11681 CATTGGTGGACATGCCAGGTTATGGCTATAGAGCACCTGAAGATTTCGTTGACATGGTAG Gene GeneID:522329|GTPBP8:NM_001075828:86_cdna Constitutive 1 NULL GeneID:522329 1 GENE GTPBP8 MGC142510 GTP-binding protein 8 (putative) EMBV3_06968 CATCAGGAATGACTCCCACAACCATTCGCTCATCGTAGCCCTGAGGTCCCCCCAACACAA Gene BVT0102_275740 + 1 EMBV3_43497 GK000007.2:12401645-12402302 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03037 CAGGGACTGATGACTGATGACTTCAGGCAAAGCTGGATTCAGGGGTTTAATCGATATCAC Gene BVT0101_073430 - 1 EMBV3_34066 GK000017.2:56701106-56724776 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25968 CCACAATTTGGCCTTCTATTGTTGGTGTGGTTACCTGGACATCAGCCCCTCCTGGATAAG Gene GeneID:530613|AADACL3:XM_002694149:543_cdna Constitutive 0 NULL GeneID:530613 16 GENE AADACL3 NULL arylacetamide deacetylase-like 3 EMBV3_25017 AGCAGGAGTGTGGTGGAGGTGCAGAAGGAGGTGAAACTACAGAAGTCAACAGAATCCTGT Variant GeneID:513290|TMCO5B:NM_001075609:52_cdna 419^487 2 EMBV3_33327 GeneID:513290 10 GENE TMCO5B MGC134095 transmembrane and coiled-coil domains 5B EMBV3_13597 TTGGGGGCGACGGGGGGTAAATATGCCCTCTACAGACAAACTACAGGAGGTAGATCTTGA Gene GeneID:508858|LOC508858:XM_002696645:213_cdna Constitutive 0 NULL GeneID:508858 21 GENE LOC508858 NULL similar to duodenase EMBV3_39786 TTCTCGCTTTCTTCCTGAAGACTCAGGTTCCCCATCTGTAAGACGGTGACTGCACTCTCG Gene BVT0102_185416 + 0 NULL GK000019.2:23011337-23041883 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095751 TCONS_00095754 TCONS_00095752 1 XLOC_057787 NonCoding TCONS_00095754 XLOC_057787 NonCoding NonCoding LOC100847418 19:23040195-23041767 j TSS71304 422 1 TCONS_00095754_1 79 0.248815165876777 3 0.733290897517505 0.00129961961742286 9.1896497700172e-05 0.0022468906901873 0.00370886626896131 0.00115302846471018 2.09385809726583e-08 0.000428509395860607 9.52500600459816e-44 4.733070696534e-05 1.01173751224484e-34 1.44529778566487e-23 4.44117805111603e-17 0 1.87576320629248e-12 0 6.18604622669936e-37 0 0 0.00021132954451334 0.00237877956329793 2.74949173946948e-19 0 0 0 0.00300571187759606 9.43262440130401e-05 0.00497579333640156 0 0 0 XR_229082.1 LOC101902030 PREDICTED: Bos taurus uncharacterized LOC101902030 (LOC101902030), 7e-11 71.6 82.43 0.170616113744076 0 noncoding 0 0 0 0 -0.17845565718053 0.388187406316546 0.0248037000228524 0.600167133182047 CGGTGTCAGCTTTCTCTTCACCCTTCCCTTGAGAGAGGAGACTCGCTGCTGACGCACATGATGGAGATCCATGAGTTATTTCGTGACGAGTTCTGAACTGGGTGGGCAAGGTCCCCACCCGCCCTGGAAACCTATGGCATGCTCTGTCAAGAGCCTTCACAGCTGTCACCTCACTGATCCCTTCTGCCACCCACCACGCAGGCAGGGCAGAGTACAACATTCCCACTTTGCAGGGGCACGAGAGTGCAGTCACCGTCTTACAGATGGGGAACCTGAGTCTTCAGGAAGAAAGCGAGAAGCCACGGCATGAGGAGACCACGCACCGCAAGGAAGAGGAGTCCCCGCTCGCCGCAACTAGAGAACGCCCACAAAGACCCAACGCAGCAAAAAATAAACAAAAGCCTCCTCCTAATTGTGTCTAA EMBV3_29401 GCTCAGTAGCCTGTAAGGAGATGGTAGCCTCTTCAGTTTCTATAAAATACATCTTGGGGG Gene BVV0102_239697 + 0 NULL GK000004.2:32556833-32573080 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06402 CCACCTCCAGGAATTATGGCTCCTCCACCTGGTATGAGACCACCCATGGGCCCACCAATT Gene GeneID:780877|SNRPN:NM_001079797:5_cdna Constitutive 2 NULL GeneID:780877 21 GENE SNRPN MGC139729 small nuclear ribonucleoprotein polypeptide N EMBV3_32425 TTCCTGCCTGGAGTTCAGTCGCCCCAAAGTCTTCCGAGTCCAGCAAGAGACAGATCTAGT Gene BVT0102_169601 + 0 NULL GK000017.2:14921768-15271853 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074944 TCONS_00074949 TCONS_00074946 1 XLOC_046456 NonCoding TCONS_00074944 XLOC_046456 NonCoding NonCoding - 17:15116470-15171410 - TSS56650 1349 4 TCONS_00074944_1 72 5 0.975536504122754 3.26306243446271e-19 0.00141829024096795 8.91539590718371e-05 2.05927851329189e-12 3.56757161583899e-62 3.23224002915953e-54 1.12292388748464e-24 2.85120572476e-11 2.36848626828532e-12 0 0 0.000135172122776439 1.58545582774411e-18 0 0 9.78236761105337e-05 0 0 6.63974490496655e-19 7.83038708366177e-15 2.95096842762373e-10 6.71366636274241e-06 0 2.73176893601814e-05 0.000234388467259246 0.000266087558347966 1.37249255435975e-10 0 0 5.79239269827066e-05 XM_005192639.1 LOC101906706 PREDICTED: Bos taurus uncharacterized LOC101906706 (LOC101906706), 0.0 1851 100.00 0.759822090437361 0 noncoding 0 0 0 0 -0.124435882621058 0.31774978922523 0.0157779210915629 0.797145076833294 GGGCCTCTGGGTTTGTGAACTGGCCTCATTCTGGATGGATCAGAGGACATCTAACGCAGAGCTTTTCAACCTTCTGGTGCCTATTTCATCAATGCCTTGGTAGCCGAAGTATTTTCTGCGCCATCCTATGAGAGTTCTACTCTTTGGTAATATTATCACTCCTAAACTGCTTGTGTGTGACCTGTGGACAGAATGCAAGCATTCTTGACCTGGATATTGTCATCTTTACAGGAACCATTCAATGACAGATTTTACAAGAAAGTCCTATTTTCTGATCTGTCTTGAAGCTCCATGTAGAAGGAAATCTCCCATCATCCCTCACACGAATCCCTTCAACCAATCATCTGCTGGTTCTCTTCATGGTAATTCAAGTCCTTTCTTTGTATCTTCTGGCTTCTCCACACTGTTGCTGCCTTCAGATCCACCCAGAGATAGGACAGAGTCACCCAGGCTCAGCTAAGATCCTGCTGTTGTGTTTAACTACACTTTACGACACATGATGGACGCAGAAAGGAATGACAACGGATGAAGAACAAGCAAAGAACAGGAGACTTCTTAGGACTTCTTCTAAAGTGTGCTGGCCACATCCTTCTATGGGGGTAGCTGGGATGTGGCCACAGGGACAGAATCGGGTGGGCAGGGGAGGCAACATGGTAGACAAACACAGTGCAGAGAGCACTCGGCACCCTTGAACGAAAGTGCCTTTGGTCTTGAGCTTCCTGCCTGGAGTTCAGTCGCCCCAAAGTCTTCCGAGTCCAGCAAGAGACAGATCTAGTTTCTCTCATCTGCCACTCCTCACCTCCAGCTCAGAGCTAGCCTCCAGGAAACATAATCCTCTTCAGAGATGTAGTAGGGTTTGGAATGCAGACGACCTTTTTCATTGTTATGTGGAACTGCTTGCTTCCTCACTATTTTGAATGTCCCATTGTAGAATAATATTCTTTTTGGCTGTATCATTACCACCAGTGGATTACCACCACTTTATCAAAATCCACCAGGGTACCTTGTTCCTCCTAAATCAAAAGCAATCTGACATGTGGTTCAAGTTAAGCTTCCATTTGGAGAACTTGATAAAATGTTCACAGTTCTAAAATAGTGGTGTTTCTTGGCTCTCTGCTCCCAATCACCTCTGAGTACCCTATCGAGGTTTTTTTCTTTGTTTGTTTTTGTTTTTAAATAAAACATGCAAGCCTACTCTCAGCTGAAGCTTTCCATTACAAAACCAGAAAAGGCTAACTCAGGGAGGTTTTTATTTTTATGTTATAGAAAGCATAAAATGAGTCAATCATTTGTTTTCATTATAACTTTCAGGAAAATGAAATTCAGCCTTATAAAATGTTACTTCATTT TCONS_00074953 s 5' 100444 TCONS_00074953 s 5' 155383 EMBV3_16369 GAACATTCATGTCGGTTGTTTCACCACCTTGGGTAAAGGGAGATACCCCGATAAAGAGGC Gene BVT0102_031245 + 0 NULL GK000025.2:13790207-13809390 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144592 1 XLOC_088595 Coding TCONS_00144592 XLOC_088595 Coding Coding RRN3 25:13778680-13806744 = TSS108518 3780 1 TCONS_00144592_4 651 18 0.865944482058226 0.004454861373624 0.00403329804950243 0.00382016409135809 0.00325759709674198 0.00429490104809118 0.00154671043345675 0.00437239295859555 0.00492930673137615 0.0086751083563066 0.00453279688412157 0.00102181317457602 0.00120401742958606 0.000845165838708407 0.0027732092292042 0.000865959101879912 0.00561813533982287 0.00228830322255562 0.00489349811280927 0.00506387422695001 0.00293797787752898 0.00137392298364957 0.00275655395891682 0.00220134841478257 0.00371189324959854 0.00405794649536784 0.00322007184030117 0.0023724783480457 0.00188291693207869 0.0011672541304195 0.00229197310803113 NM_001192432.2 RRN3 Bos taurus RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) (RRN3), mRNA. 0.0 6818 100.00 0.99973544973545 NM_018427.3 RRN3 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) (RRN3), mRNA. 0.0 2504 87.89 0.51984126984127 TCONS_00144592_4 sp|Q9NYV6|RRN3_HUMAN RRN3_HUMAN RNA polymerase I-specific transcription initiation factor RRN3; 0.0 1157 90.49 0.989247311827957 1 coding 0 0 0 0 -0.671931237904391 0.0718029982455241 -0.0332465225867821 0.519173184082548 ATGGCGGCTCCTCTGCTTCACACGCGGTTTCCCGGAGATGCGGCCGCTTCGGGCTCTGCGGTCAAGACGCTGGGCTCGCCGAGGACCGGGCTTTCAGACATGCTTGCATTAGAGAATGATTTCTTCAGTTCTCCCCCAAGAAAAACTGTTCGGTTTGGTGGAACTGTGACAGAAGTGTTACTAAAGTACAAAAAGGGGGAAACAAATGACTTTGAGCTGTTGAAGAACCAGCTGTCAGATCCAGAGATAAAGGATGACCAGATCATTAACTGGCTGCTTGAATTCCGTTCTTCCATCATGTACTTGACGAAAGACTTTGAGCAGCTTATTAATATTCTGTTGAGATTGAAGTGGTTGAACAGAAGTCAGACAGTGGTGGAGGAGTATTTATCCTTCCTTGGTAATCTTGTATCAGCACAAACTGTCTTCCTTAGACCATGTCTCAGCATGATTGCTTCTCATTTTGTACCTCCCCGAGTGGTTATTAAAGAAGGTGACGTAGATGTTTCGGATTCTGATGATGAAGATGAGAATCTTCCTGCAAATTTTGACACCTGTCACAGAGCCTTACAGATAATAGCAAGATATGTCCCATCCACACCATGGTTTCTTATGCCAATACTGGTGGAAAAATTTCCATTTGTTCGAAAATCAGAGAGAACATTGGAATGTTATATTCATAACTTACTCAGGATTAGTGTGTATTTTCCGACCTTGAGGCATGAAATTCTAGAGCTTGTTGTTGAAAAGCTACTCAAGTTGGACGTGAATGCATCCCGGCAGGATATTGAGGATGCTGAGGAAACAGCAGCTCAAACTGGTGGTGGAGCTGATGCCACAGAAGCCCTATTTAATATGGATGAAGATGAAGAAGCTGACCATGAAACCAAGGCTGATCCAGGAAGGCTCGATCAGATGGTCCATCCCATGGCTGAGCGCCTAGACATCCTCCTGTCTTTACTCTTGTCCTACATTAAGGATGTCTGCTATGTGGATGGTAAGATTGATAACAACAAAACAAAAGATTTGTATCGAGATCTCATAACCATCTTTGACAAGCTCCTGTTGCCCACCCATGCCTCTTGCCATGTGCAATTTTTCATGTTTTACCTCTGTAGCTTTAAATTGGGATTTGCGGAAGCATTTTTGGAACATCTCTGGAAAAAATTGCAGGATCCAAATAATCCTGCTATCATCAGGCAAGCTGCTGCAAATTATATTGGGAGCTTTTTGGCAAGAGCTAAATTTATTCCTCTTATTACTGTAAAATCATGCCTAGATCTTTTGGTTAACTGGCTGCACGTATACCTTAATAACCAGGATTCAGGAACAAAGGCATTTTGTGACGTCGCTCTCCACGGACCATTTTATTCAGCCTGCCAAGCTGTGTTCTACACTTTTGTTTTTAGACACAAGCAGCTTTTAAGTGGAAACCTGAAGGAAGGTTTGAGGTACCTTCAGAGTCTAAATTTTGAACGGATAGTGATGAGTCAGCTGAATCCTCTGAAGATTTGCCTGCCCTCAGTCGTTAACTTTTTTGCCGCAATCACAAACAAATACCAGCTCGTCTTCTGCTACACCCTCATTGAGAGGAACAACCGCCAGATGCTGCCCGTTATCAGAAACACTGCTGGGGGGGACTCGGTGCAGACCTGCACGAACCCACTGGACACCTTCTTCCCCTTTGATCCTTGTGTGCTGAAGAGGTCAAAGAAATTCATCGATCCTCTTTATCAGATATGGGAAGACATGAGTGCAGAAGAGCTTCAGGAGTTTAAGAAACCGATTAAAAAGGAGGTGGTAGAAGATGAGGAAGATGATTTTTTGAAAGGTGAAGTTGGAATCACACCGAGCTCCTTTGACGCGCATTTCCGCAGCCCTTCAAGTAGTGTGGGCTCCCCACCTGTCTTATACCTGCCGGACCAGTCCCCCCTGGTCACAAGGATTTGTGACTGAGGCTGACATTCCTCCCGTAGTGCCCTTCAGTACTGGGTTTCATCCTGTTTGAGTGTTTCTTTGAACTTGAGCGAGTACATGCTTCAGGCATCTTACTTTCAAGTTAGACTTACTCTGGTGTCTGAACAGATGTGGTTGGGTTTTTTGTTTTCTTCTTTTTTTTTTTCTGTTTTGTTCCTGTAGAGACTAAAGGAAAAGACAGAGTATCATGTGCAATATTTTACAGTGGAGTTGGTGATAAATGTTGAAAGCTTGGCTCATACTTACAAGACTTTGTTGACACGATATCTTTTCACTGAAAAGTCCTCTAGGACACTCTTTAAAGTCTTCAGAATGAGTTTAACTATTTTGGATACACTGTGTACCCTCTGCCTAATTGCATTTGTGTTCTGGAGTTTCAGTGGGGTGCAGGGAACACAGGAGGACAGATGGGGGAGGTGGCCAGGGCTGGTCCTGGATGCTACAGGTTGGAGCTGGCACTGAAGGAGATCTCCAAGGACTTCAGAAACCAACAGACGCCTGGAGGGAAGAGAGAGAGGATTTAGAGAAGCAGAATCAGACAGATCATACATTTGTGAGTGTAAAAATGGATTTAAGAGGAAAAAAGGAGTTCTGGGTTAATGTAGTTCACATTGACTAAAAGAGGGGTTGAACTTTTATAAAACACAGTATTTTATCTTGAGGCTCCCAAGAGTGCTATTAGAACTGGAACTACTTGTTGGCGGTGGAATGTTATGTTGGTAACTGAGAATTCCTTTGTCCAAAAGTGGGGGAAGAGGGGATTTTAGTTTATTTGGTGGAATGGTTTTGCTAGCAACAAGAGGCCAGGGTTACAGCGCAGTCCCTGTCTACTGGCTATTCATCGTATCATGAATTCCAGCTCACTGAAATCCTCCTCTCTTGAGTCTCTTTTTGTATTTTTATAACCAAACACTGAGAGAGAGGAGTCTAAACAACATTGCTGTATAACAGACTTACGCAAGCGCTGCTAGAGTCATTTTGAAGCTCCTGCATATTTTAGCTTCATTTGTTATCTGTGTACTTTTTTGTTATTTGTGAAAATGGACATCTTTAAATATATTTATTTTTCGGTCACTTTTCCTATTCTTTATTTAAAGTTAAGCGATATTTTCTTGATCACAAATATTTTGTAATGAAATACTTTTCTCTTTCCTAGGGCTTTGTATGCTCTTGTATATTACATTGATGGCAATGTAGAATTTGGAGTTTCAGTCTGTAAATACGTTTTTGAAAAACAAATTTTTATTGTTATAAAAAGTTTTGGATATTGGTGATTTTCTTTTGGTGACTTGGTAGAAGGTCCTTTGAGAGCCTTTAGGTTCTCTTTTTAACTGCTGACAGAAAGATAGGATTTTTGTATAGTGCATAAAATGAGTGATTGAAAATGTGTCCATAGAAATTAACAGTGAGTGGAGTCTTTGTGAGTTGGGGAATAGCTTTAATGTAGAAGGATATATTTACATAGAAGTCTAAAATTTCAAAGGAGTTGGGAAAAAAATCTATTGTGAGAATAAAACAGTGACGTGGTTAACTTGGAACTTTTGTTACACTCTCTGAGCTCCACTTTGAAAATAAAAGTGGAACTACTTGTGAGGATTTGATGAACATTCATGTCGGTTGTTTCACCACCTTGGGTAAAGGGAGATACCCCGATAAAGAGGCTTGTCACAAAAATGTTCTTCTGATTTCTGTGTTTTTTTTTCTTAATTGATCTACTGTATTAAAGCACCGTTTTTCAATAGAAAACTGAAATTGAGACTTTACGAAATTGAGACTTTATTAAAGAGGCAAAAATAATTGTCA EMBV3_30441 TCAGACCTTCGAGGCAGCCATCCTTACACAGCTGCACCCACGCTCCCAGATTGACATCTA Gene GeneID:618292|EXOSC4:NM_001078086:128_cdna Constitutive 0 NULL GeneID:618292 14 GENE EXOSC4 RRP41 exosome component 4 EMBV3_29205 GGAGGCTGTGGAAACCGCGAGCGACAACAGAAAATGATAGAATCCAGTGGGAAGAACAAT Variant GeneID:767877|CCDC152:XM_002696362:36_cdna 162^255 1 EMBV3_15623 GeneID:767877 20 GENE CCDC152 NULL coiled-coil domain containing 152 EMBV3_31147 CCATGTTGATGGCGGACAAGGAGAAGAAAGGCTACATCATGGCGTCTGAACTGCGCTCAA Gene GeneID:539277|CALML4:NM_001034671:225_cdna Constitutive 2 NULL GeneID:539277 10 GENE CALML4 MGC127323 calmodulin-like 4 EMBV3_31600 GGCTTGGAAGAGTGCAAGGATGTGAACAAGGTCGCCTACTGCCCCCTGGTGCTGAAATTT Gene GeneID:513140|ADAMTS10:XM_002688879:110_cdna Constitutive 0 NULL GeneID:513140 7 GENE ADAMTS10 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 10 EMBV3_25463 AGGCTCCTGGTTCTTATTAACCGCAGAGAAGGAAATACAACTAGCAAACCCACAGCACCA Gene BVT0102_116292 + 0 NULL GK000022.2:56290874-56434754 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129211 TCONS_00129222 1 XLOC_078067 Coding TCONS_00129211 XLOC_078067 Coding Coding VGLL4 22:56217851-56372854 j TSS96171 3946 1 TCONS_00129211_2 287 6 0.974580973148734 0.00284493859122411 0.00103130463828198 0.000677032666846648 0.00116322066657661 0.00214054918692422 5.8867676982582e-05 0.000776412790588967 0.000849384947685218 0.0011490502711633 1.35503143240406e-19 3.17954519492208e-05 1.17395184547193e-47 0.000429319609898564 4.77009105998611e-07 0.000555315159696776 7.53510594597885e-24 6.58391927096801e-20 3.00682927014672e-19 0.00133866599001968 0.0014475467023285 0.00102117015518185 8.25322997824982e-23 5.21810664582703e-21 2.15519586187819e-66 0.000238631330346831 3.23250851350333e-05 0.00159273765060534 2.0584243483385e-86 1.00908199435928e-21 3.35260675622767e-35 XM_005223081.1 VGLL4 PREDICTED: Bos taurus vestigial like 4 (Drosophila) (VGLL4), 0.0 5880 100.00 0.82589964521034 NM_014667.3 VGLL4 Homo sapiens vestigial like 4 (Drosophila) (VGLL4), transcript 0.0 2210 82.04 0.570197668525089 TCONS_00129211_2 sp|Q14135|VGLL4_HUMAN VGLL4_HUMAN Transcription cofactor vestigial-like protein 4; 0.0 508 90.68 0.958188153310105 1 coding 1 1 1 1 -0.246463405197153 0.317126650206674 -0.0219399853616304 0.648799774930568 GATCATTGGTGCTGTGGGTTTGCTAGTTGTATTTCCTTCTCTGCGGTTAATAAGAACCAGGAGCCTGGGGGGCGGGGGGCGGAGGCGGGTCTTCTAGTTTCTACCAGCAGCTGGTTGCCCCCGTATTCGAAAGGTACTATCTCCTGTAGTGTGACTTTTTTCAAACTCGAGCCTACTTTGATGAAAACGAAGGCTCGCATCTGTTTCCTCTGAACATTCAAAGACAAAGGCAACAAGTGTTACTTCTATTAGTATTGGAAGGCTCCAACCAGGAATGGAGACCCCATTGGATGTCTTGTCAAGGGCCGCATCGCTGGTACACGCTGATGACGAAAAACGTGAAGCTGCTCTCCGAGGGGAGCCCCGGCTGCAGACCCTCCCGGTGGCCTCGGCCCTCACCGCTCACCGCACGGGGCCCCCGCCCATCAGTCCCAGCAAGAGGAAGTTCAGCGTGGACCCCGGCGACGACGACCTGGATTGTGACGGTGATCATGCTTCCAAGATGAGTCGCATCTTCGCCCCCCACCTGAATAAGACGGCCAACGGGGACTGCCGGAAAGACCCCCGGGAGCGGAGCCGCAGCCCCATCGAGCGGGCCGTGGCCCCCACCATGAGCCTGCACAGTGGCCCCCTGTACGCGTCCCTGCCCAGCCTGAGCATGGAGCAGCCCCTCGCACTGACCAAGAACAGCCTGGACGCCGGCAGGCCGGCCGGCCTCTCGCCCACCCTGGCCCCGGTGGAGCGGCAGCAGAATCGGCCCTCGGTGATCACGTGCGCCTCCGCCAGCGCCCGCAACTGCAACCTCTCGCACTGCCCAGTGGCGCACAGCGGCTGTGCGGCCGGCCCGGCCAGCTACCGGCGGACCCCGAGCTCCACCTGCGACCCCGTGGTGGAGGAGCACTTCCGCCGGAGCCTGGGCAAGAACTACAAGGAGCCAGAGCCGGCCCCCAACTCCGTGTCCATCACGGGCTCCGTGGACGACCACTTCGCCAAGGCCCTGGGCGACACGTGGCTCCAGATCAAGGCGGCCAAGGACGGCGCGTCCAGCAGCCCCGAGTCGGCCTCGCGCCGGGGCCAGCCCGCCAGCCCCTCGGCCCACATGGTCAGCCACAGCCATTCCCCGTCCGTGGTCTCCTGAAGGGAGCGCCGCCCTCGGACACCACTTCCATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGCGCTTAAAAAAAATGGAAAAATTGGGGGGGAAAATTTGGTGGGAGAGGGAGGGATGGTTTATTCGCAAAAGCCACGTGGTGGGGTTTCTATTGTGTTTCGTTACTTGCTTGGTCTTCGTCCTCGGGGCCCTCAGACATGCTGGCGGCGCCGCGCGGGGCACCTCTGTCCGCGGGCGCCCGCACGCCCGCCTCGGTTACCAAAGACGCCTGGACCAGGTCAGCGCCCTGCGAGGCCGGGTCGCCACGGCTCGCGCTTTCTCAGTCACAGGCCAGGCCACTGGCGACCCAGACGCTCTGTGCTTTTTCGTTCGCTTCTCGAGACCCGGGCGTGTGCGGCTCCGCTTCCAGCCTGCGTGTGTGCGTGCTTGTGTGTGTGCGTCTACTTGAAGAGAACAGGACTGTCGTGTCTGATTTGCACTATGGGAGGAGGACTCGAGTGGCCTGCCTGACAGCTTTGTGCGAGACGCTGGTGCTCTGAGGGCAAACTGCTGAGAAACAGAGGGTTTCAGGATGACATTTGTGACCATTTGTGTTTTTTGTTGTTTTTTAATTTAGACAAAACCGCTTTGGAAAGGGGAAGTCTCATGCAGGTTATAGGTCTTTCTCTGTCTAGGTTTCAGGTGCTTGCAACTGGACTGCAGACTCTTACCAATCACGGGCATTTTACCTTTTCTGAACACTGCAGTTTGTTAGGCTAGAGCTGAAGTTGGAGGAGCCTGTAGTGCTTTCAACAGTGATGCATGTTTTAATGGATAAAAATAGCTGGTTTCTATTAACTGTATAGACAGTAAACAAAAAATCCTTAATACTTAACTAGCTTCTTTTCAGAATGCGTTTTATTTTTGTCAGTTACAGTCCTAGATATACTTACTGCTGGTACAGTTGTACTCTAAGATTTGTATTTGATATCCACGTTACTCCCTGGCAGGCCCTGGACGCGGGCGGGCGAGTGGCTGGTCAGCGGCCGAGTAGTATGCTGGAGCGGTGGCCGCAGGCTGACAGCATCGGCTATTTTCTGCCTCCCTGCCTGCTCCCGCGCTCCCAGGGGAGTTGGGACTGGTGTCTCCCAGCTTCCCTCTCGATACAGAAACTGCTCTGCTCCCTTGGCCGGACAGCAGATGCCCGACAATCTGACGCGGTGTTTTTGTGTGCTTCCTCTCGTACGCTGGGGCCAAGGCAGTATACATTCCTCTGACTTTATACAGTTATTACTGCATTTATTATTGTTTGCTATAGTCATAGCTACTAACTAGGAATTAGGCGAAGAAGCAAGCATGACAGACCCAGCTGTGGATGTTCGACAGCTGCTTTTGTGTCCGGGAACCTTTTCTTGGGCCCCGCCCCTTCCGGGCGCCGCCTCCCGCCCCGCCCACCAGGGCTCTGGGTGCCCCCTGGCCTGGTCGTCAGTAGGAGAGAGATACAGGTTGGCTGGTGACTTTTACACAGTTGGCACTGGGTGACCAGGCGGGCGTTGGGTTCCTGGGGCTGCAGGTCTTTGAAGAGGCAGGAGGAAGGCGTCTCCCCCCCCCCCCCACCCCCACAACCCCGCACGCATTTCCCTCCCACTTCACTGGGCTTCCAGGCTTTTGCATCCAGGCCCCTATATTTTCTGTAGGAAAAAAAAATCATCGAGAACACTTTTTTTATATAGGTAACTTTAAGACCATCATTACGCTGTGCGTAAAGAATGTACAGAGAAATTTGTAGGTATTTTTTGAAGAACAATTAATTTGTTAATGATATGTAGCTATTTAATTTTTCCCTTTTCCTATTGTAATCATTCATTTTTTTTTTTTGTTTGGAAAAAAAAGTTGATCTTTTTTTTTTTTTCGTCTTAGATTTGTCTGTAAAAGTGCAGGAACACAGTTATTCTATGAGAACACTGCATCTGCCTTAATAGCCACTAGTTTGTTATTGCTACAGGCTACTGAGCGTCGCCCAGGAAAACGACCCACTGCCGGCGGCTCTGTGCAGAACGGGGCTCGGCGGGCGCCCGCCAGCGAGGACATCGCTGGGGAGGGGGAACTGGAGCGCTGAGGGCCGGGTCCCTGCTGGGAGCGGCCGCCTGGGAGGGGCCCCGGGCAGGGGGACACTCCCCGGCCTCAGGGCACAGAGAGGTTCTCCACAGAGCCAGGCCATCCGCAGTGCGTTCAGACCATTCTCTCCGTGTTTGTAAATCTGTAATATACCATTCTCTGTGGCCTGTTTTTCCTGGAAGAAGAAGAGGAAAAAAAAAAAAAAAAGGTTTGGCAGGCCATCTTTTTTTTGTACTTAAAAGTAGCCTTAAGAACAATAATAAAGTGCTCTTAAACCACAAACTGTCAGGGTGATTCTTGGGCCCTGGGGACGGTGGGGTGGGCTTAGTGCCTGGGGTCCAGTGGCCTCTGGTTTAAGTCCCACGTCGGCTGGAAAACTAATTTTTAACTCTCAAAGAGAAGCATCATTTAAAACCTACAGCAACCCAACTCAAGACTCATCATTGACTTTGCTTCCTTGCCCAAGATAAAAGGGCCCCCGCTCCTGGCTTCCATGCCCTGCTCAGTGGCCACAGAGGCGCAGCCCCAGGAGGAAGAGTGAAATCAGCCTGAGTGACCCCAGCAGGGCGCCTCCCCCAAACCCTCTGACCATCCCCCTGGCTGCATGGAGGCAGACCCATCGCCCACTCCGCCCCTCCTGGAGTTGGGGCCTCCAGGCGGAGGTGGGACCTGGGAGCAGGCCCTCCGGTGAGGTCTGGGCCTCCAGAGG EMBV3_12341 ATCAACTCCATCAAGAGTGTGTTCGGGGGGCTCGTCAATTACTTCAGGTCCAAACCTGCC Gene GeneID:532261|SNAP29:NM_001075959:79_cdna Constitutive 0 NULL GeneID:532261 17 GENE SNAP29 MGC151958 synaptosomal-associated protein, 29kDa EMBV3_11524 ACTTGGTGGCCATCACAGAGCTGATGCATCCCGTCAGCGCCGGTTGTGACATCTTCAAAA Gene GeneID:516190|GSTT3:NM_001075738:52_cdna Constitutive 0 NULL GeneID:516190 17 GENE GSTT3 MGC140789 glutathione S-transferase, theta 3 EMBV3_23828 GATGTTTCTGTAGTCACTTTGCCAGCTCAAAAGAAGACAATACCCTATCTGTAGTTGTGG Gene GeneID:281814|HIF1A:NM_174339:20_cdna UTR3_Alt 2 NULL GeneID:281814 10 GENE HIF1A NULL hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) EMBV3_35223 TGATACCCAGACCTTGATTTCCCTCCAAGAAACCACTTCAACCCCCCTCCAACCCCCATT Gene BVT0102_191138 + 0 NULL GK000006.2:90563648-90633824 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19568 TTTGCCAAGCACTGCGTGAAATGCAACAAGGGTTTGGTAAAGGCTCCAGTGTGGTGGCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32106 GGTGCAAATTAGTAAAACCTCCAAAAGAAGTTCATGTTCTTTGGTGGAACGAGAGTGCAG Variant GeneID:534363|NIPSNAP3A:NM_001080298:24_cdna 531^680 3 EMBV3_12327 GeneID:534363 8 GENE NIPSNAP3A MGC140274 nipsnap homolog 3A (C. elegans) EMBV3_12925 TACTATGCAAATACGGAGGAGACCACTTGATTCTCCGAGGTGGAGAGGTGATGGTAAGGG Gene GeneID:505558|KDSR:NM_001045919:50_cdna Constitutive 0 NULL GeneID:505558 24 GENE KDSR FVT1 MGC137214 3-ketodihydrosphingosine reductase EMBV3_37283 TGTGTGCGAGTACGTCCGTGCCTGCGAGTGCCCTGATCCATCCTTCCTGACTTGTACATA Gene GeneID:531049|LOC531049:XM_002695693:267_cdna Constitutive 0 NULL GeneID:531049 19 GENE LOC531049 NULL similar to Putative eukaryotic translation initiation factor 3 subunit (eIF-3) EMBV3_33507 GTGCAAATAGAAACCTTTCCTGCAGTTCCTGTGAAGAACGTACCCACACTTTCTGACGTC Gene BVV0102_039737 - 1 EMBV3_07665 GK000001.2:69724962-69732777 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001029 TCONS_00001030 TCONS_00001028 TCONS_00001027 TCONS_00001031 TCONS_00001025 1 XLOC_000241 Coding TCONS_00001030 XLOC_000241 Coding Coding LOC100847188 1:69706073-69731110 j TSS496 7746 1 TCONS_00001030_3 268 0.0147172734314485 6 0.690845182936571 0.000286177731330012 0.000475857958987186 0.000471364132910071 3.0366580040049e-05 0.000314217568264647 5.92927026645002e-05 7.56283947715712e-07 0.000123802917616711 0.000327040092813238 3.83325903133892e-05 2.62801472894399e-09 2.06500167786302e-09 8.30724608268339e-05 0.000117987430104668 4.53784112405754e-07 4.0800627002531e-164 1.24720486124009e-34 2.28086226601077e-30 0.000338370998630105 0.000495075177538169 5.84964087070892e-18 0 1.24417392942487e-39 7.34876747417704e-59 0.000714499515564508 0.000417165500702635 1.87731945821299e-05 1.99864747870318e-52 6.26725181098279e-07 5.60173913575381e-10 XM_005201451.1 LOC100847188 PREDICTED: Bos taurus kalirin-like (LOC100847188), mRNA. 0.0 4453 100.00 0.318616059901885 NM_001024660.3 KALRN Homo sapiens kalirin, RhoGEF kinase (KALRN), transcript variant 1, 0.0 3425 86.89 0.367544539116964 TCONS_00001030_3 sp|O60229|KALRN_HUMAN KALRN_HUMAN Kalirin; 0.0 568 99.63 0.996268656716418 2 coding 0 0 0 0 -0.0817957114100939 0.524060262961616 -0.00184228703620003 0.969807839343969 GCCAGGTAGCTCTAATTGTTAATAGCACTCTCTGAACCAGGTGATGAATCACACACCTGAATTGAAAGCAACGGTTTTCACCTGGAACCAGAATCCTTTGTTTTACTCTGCTCTCTGCTACTCTTATTTTCACCCTTCTCTCTTCTCTTAAAGAGACCTCTGCAGTTATAAAAATATTTGTCCACCTCTTTGTTTAGCTTTTCACTCTGTCTCTCAACTCAGCACAAAGGCATTGATGCTGAGCTGAGAGAAGTCTTTCCAAGCTTGTATTTCCCTTGGCATTCTTCAGGTCATAGTTCATCTTATGAACTAAGTTCTCTTGGGAAAGTTATCTAATCTTTCTGAGCCTCGGTTACTTTATGTGTAAAGTGAGACGAATACTCCCGATCTCACAGGGCTTCTGTGGATTTAAGTGACAACGTGGAAGGAGAGGATTACGGGTAGACTCCTTCCACAGTATCTTACAGGTTCCCAGGCCTGGCAGCAGTCAGTAGCATCGACCTTGGACACCTACCTTGTCATTGAAGACCTCAGTCCTGGGAGTCCTTATCAGTTCAGAGTCAGTGCCAGTAACCCCTGGGGGATCAGCCTGCCCAGCGAGCCCTCAGAATTCGTGCGACTTCCAGATTACGACGCTGCTGCCGATGGTGCCACCATTTCTTGGAAGGAAAATTTTGATTCAGCTTATACTGAGCTGAATGAAATTGGAAGAGGCCGGTTCTCCATAGTAAAGAAGTGCATTCACAAAGCTACTCGCAAAGATGTCGCTGTGAAATTTGTTAGCAAAAAAATGAAGAAAAAAGAGCAGGCTGCCCACGAGGCTGCCCTGCTTCAGCACCTGCAGCACCCCCAATACATCACTCTCCATGACACCTATGAGTCCCCCACTTCCTACATCCTCATTTTGGAACTGATGGACGATGGCCGACTCTTAGACTATCTTATGAATCATGATGAGCTGATGGAAGAAAAAGTAGCTTTCTACATTCGAGACATCATGGAAGCCCTGCAGTACCTTCATAACTGCAGAGTTGCACATTTGGACATAAAGCCTGAAAACCTGCTCATTGACCTACGGATTCCAGTGCCTCGAGTGAAGCTCATTGACTTGGAGGATGCTGTCCAGATCTCAGGTCACTTCCATATCCACCACCTTCTGGGGAACCCCGAGTTTGCTGCCCCAGAAGTGATCCAGGGCATCCCTGTATCCCTGGGCACCGACATCTGGAGCATCGGGGTTTTGACATACGTCATGCTGAGTGGGGTCTCCCCCTTCTTGGATGAGAGCAAGGAGGAGACATGTATCAATGTGTGCAGGGTGGACTTCAGCTTCCCCCATGAGTACTTCTGCGGTGTGAGCAATGCTGCCAGAGATTTCATCAATGTGATCCTACAGGAAGACTTTCGGAGGCGGCCCACAGCAGCCACCTGCCTGCAGCATCCGTGGCTGCAGCCCCACAATGGCAGCTACTCCAAGATCCCCCTGGACACCTCCCGCTTGGCGTGCTTCATCGAGCGCCGCAAGCATCAGAATGATGTGCGCCCCATTCCCAACGTCAAGAGCTACATTGTCAATCGGCTAAACCAAGGCACGTAGCCATCTCCCAGCCCTCGTGGTTTCACATGGAAGTGCAGTGTGAACCAAAGCAAGACTGAATGTGTCTGTAAATAATTCTGTCCATCATTCACTCCATGTGGTTCTCTGGATTGAGAGATGTACCTCTTAAACCTCCTCAGTGGTTTGTCAAGGTCTGAGCAGCAGTGAAATCACCCTAAATCCAGGGACTTTCCAGAAGGTCGTTCAGAAGAGATACAGATGTAGAGTCACGGAAATTATTCAGAAGAGAGGCGGAGATAACAAGAATAGCAGCTGTTATGACATTTTAACTGTGTTCCAAAATGAGTGGTTAACTTGGCAAAACATAAGATCACTGAAGAAAGTATAAAGGTTCCTGCCTTTGCTGAAATTTTAAGCAAGAAGTTCTATTTAACAGAGATGTCATGTATGTCAACTGTGCCGGTTTAGATTACTTACATATAGTTTCTTAATAGGATACATGTACACATACAGTAAAAATATATCACATTCAACTTTCAGAGTTTTATAATATAGAGATATATATGAAATCAATCTTAAGTAACTTTGAGTGCTCCAGTTAAGACAGTAACTTATGTACCGAAGCATTACATTGTTTTGACTAAGCACAATTAGATGACAGGTTTTGTTTTTTTTTTTTAGAGCCTTTTATAAATCTTGTATAGAACTATTTTACCAGAACCTGTGCATTAAGAGAAAGCAATGTTACCCTTTTGCAATCTGTGAGTGAGAAGATTTTTCTCTCGGTCACAGGTATTTGACTAACTTAGGTTCTGTTTATGAAATGCTATCCCCGGATTCACTGGCAGCTCAGAGTTCATCTGGCAGGAAAGCCTGCCAGGGAATAAATCCAAATACAGCATGAGTTGTGGGGCTATTTTTTATGTCTACACTTGATTTGAAATAGGTAACGAGTAAAACAGGTTCATGCAAAAGTGCAAATAGAAACCTTTCCTGCAGTTCCTGTGAAGAACGTACCCACACTTTCTGATGTCTTCTGCAGCTGTAGAATGCAGTCCTCAGAAAGCTAGCCTGCTTTATTTCTAACCCTTTATGGAAATGAAGGGGTGCTTACCAAAAGGAAGCAGCCATACAGGCCTTTCAAAGGCCTGGTCCCAAGTCCTTTTTGAAGCCATGGAATAAAATCTGATACGTCATCCTAACAGAGCATTGAGTTTTAACTGCAATTGCAATATCTATCACTGCTCAGCCACCAATATTTCCCTGGACTAAAAGGACTAATTGCATTTTGAGGCCAACGCTGCTTTCTGGTATATATTCTCCATACAAGATGGTTATGAACTGCTTTTTTTTCCACTGGCGGAAAAAAAATTAAACCTGGGCATTTCATGGTCTCTTTCTTTCTTTCTTTTTCCTCGGTTTTTGGGAGATTTGTTTTTGTGTTTTGTACATGAGCCATCTTTTGTTTCCTAGAATGTGTTTTTTAAATTACTCTTATGCAAATGCTATTTTAAAAAATATAACTTAAGTGTTTGTTCAAATCAGGTTTAATGGCATTGCTTCTCTCTTATAAAAAGACTGAGAAAATTAAAATCATGCAGCACAGAAGTGCAAGCAGAGAGTTTATGAAGGATAAATAGAACTATAAACCTATCTTAATGAAGAAGAATGATGGAAACTAAGCCTGAACTTTAATATATAAAATACTTAGTCCTGCAGTGGAAATGTAGAATTAAAAATACTCATCATTCTTTTCCATTGACTTCAAAGTCAACTTCTTCATCCATGCTCCACCTCATCCCATCTAAGATTATAGACTAATAAATTAGTAGAAAGTACAAGCAATAAGACTAGATAGCACTTATGTATTTTCAGGATTAACCAAATAAGTGGAAACTGATTCTGACTGTATTTGTTTCCTAGTTTTCGAATGGCCCTGGGCCACCAAGGCTACTTCCTCAGAGCTCTCTACCCCTTCATTTTCTTCACTTAAACCCATAGTTCTATACCAACACTACATGATACAATATTTTGAAATTTAAAACAAGTTTACTAAAAACTCTTTTAGTAAACATGTCTTTGTTATAAGATATAACATAAAAGAAGAAAGCCTGGTCCCTCGGGCTCATCATGGGGTAGATACAGGCACTGAGGATTCTGAATATCTGTACAGTATGGCTTGGCAAGTTATTTTCCGTCCACTGTGGGTGAGAACTAAAAAGCCCCCTGCTGAATCTTTATGAGTTTTTATGACCATGTAGGAGACAAGCTGAGTTTTTGCTTGAGAAGGATAATGGTGTCCAGACTGCACAGGAGAGCATTAATGAAATTGTGCTGTTGGGAGGGCAAGAATGTTAGAGCCAAAGCATTTATAACAGCTTTCACATCAGAGTTGGAATGGTCCAGATGGAAGGCAAGTATGATTTTGTTAACTGGAGCCAAAGTACAATCATTAGAATAGAATGAATTTAATAGAGGCCCCAAGAGAAAGGGTATATATTTTATATGGTTTGATAACTGAAGAAAGCCAACAGGGAGACATCCTATCTGCAAAGCTCCTGGTCCTTCCCAATGAGGATGAGTCGATTGTGTTCCTGGTTCAGGAATTCTCTTTAGCAAGTTGGAAACAACAAGGAATCCTAGAAGATGGGCTGGGATATATACTCTAGTTGCTCTGTGGGCAACTGTGGTGAGGGATGAAGGATTAGGAACCACTTTCTTGTACCTATTTTGGCAGAGAGATTTATTACTTTGTGGTAGAGAAGAGGGGAGAGATGAGAAAATAGTCCCCTTCTAATTATGGTAATTTTTGCAATCAAAACTTAACTAGGAATCAGTAAGAATGAACTTCCAGTTGAAATGGGAAAAATAAATATTGGTTAAAATCACAAGTTTCTTGCTTGGCTTATATCCATTGTATAGGGTTTTGGGGTTTTTTTTGTATAAAGATGGGATGCAGAAAGAAGGAAAAGATCAGGGACAACCCACAATAATTTTTTAAAGGTATATATAGTAATTTACTACATCTTTTACATTGGTTTCAAATTAAACAGATTTATATCCACTTACAGCTGAATGTGAGAAAATTTTTAAGAAAAAAAACTGTAATGTTGGAGGTGTCCTTCAGGTCTCTCACAGCCATAAACACTCTTGGGGGGAACAGAGGAAGCAGAGGGAAAGCTGGCCGCACCGCTTTGTGGTTCACAAGTCTTTATAAATAGCAGTGCCTTTCAGAGGGGAGGATGGGAGACAAAGAAGTTCATTGTATTTAGACTGACTGATATTGCAGCATTTTTTCTTTAAAATATCTTTTAAATGAAACCATCTGAACATAGGGTGAGCCCAGGAATTCTTGAGTTTCAACCTCAGCTGTTCCTGATTCGTCCTTTCTTACAGAAAGTCTGTTTTTTTCTGCCCCAAATATCCCCATTGTGAAAATGGGAGTTGGGGGAAGGAGGGAGGAATTAATCTTATAGGAATGTGGGGAAAATACCTTAGTTGGGATGTCTAGAAAATACTTTGATTTTTTTAAAAGTGCTACACACTGCCAGTGCTAAGAATTTTATTGATGGTAACTTTGAACATTCCAAGATTTCAATATTCATGTCTTTAGATACCATTTACAAACTTATGAGATTAAATTCTGTAAATTGATTTTAATTGGAAGTACTAGGTGCTCTTTGTCTGAATGTTATTTGATCTTAGCCTGTAATTTCGATCATTTAAAAGCTTATTTACAGAAAAAGGTTAGGAGAGCTGATGAAGTGTTTGTCAATAAACTGTTTTCTCGAGTATGTCTTATGGCAGAAGCACAGAGTAAGATGCCCTCCAAAGCAACCATGACTCTCTTCTCAAGCTTTATGCTCTAGAAAAATTGACAGAGAAAAGCCCAAACAGCCACTTTCCTCACTGGGAGGGCAGAGATGAGAATAAAATATTTTCTGATATCACAACTCATTTCTTTAGAATCTCACAGGTTTCTATAATAAGAGGCAAATTAAATGCACAGGTGTAGAAATGAACTGTTAGTTTTTGGAGGGAAAACTTTGGATCTTTTTCTTTTTTTTAAGATAACTAGATGTTCTGGAAGTAGCATATTTGTTTTTCCATAGTCTCCATGATTTAGTGCTGGTGAGTCAGTTGTTACTTTTTTCTTGCCTTGTGGAAGAGCATGGACATTTAGATTTGTGAGACTACAAAGGGGCAAATATGTTATAAACTAGATGCTGGTTATTTCTGTATATTAAGTAAAACTTTGTCCCGTAAATTTGATAGAGGAGGGAAAAAAATGCAAACTCACCACATCCTTGTTCAGTTTTGAGAAATGTGGGGCTTATTTATTGCCCTCCTGTGTAGCATCTCCGTGGAGTCTGGGTTAGGCAACCACAGAATGTGAGCTTTCAGTGGGTTTATTAGCATTACAGTTTTCTTAGCTATTTAAAATCTAGGGATCATTTGGAAATGAATAACTAAACCCAAGGTGGGGTTAGAAAAGGTAAGATGTGCCCATTCTCTACTAAGAAAAGGGGAGCTACTATGTTAATATACATTTTCTAAGTTCTTTGTTTCATTAATTCTAGAGGGTTAAAAACAGCTGAAATTTATCCATAGCATTAGATATCTTTAATAGAGAATATTATTCATGTGAGAAATATACACAAAAATAGTAGAACACAGGCCATATTTTCTATGAAAGACATTTCTTCCTCATTTTCAATATATGTAGAAGTTAGAAGAGAGGAAAAAACAATTACTCTAAGACAAATTTTCATCTTTAAGGGACATTTATGAAAAGATTGAAATTAATACTCATGGGCTATTGTGTTTCCTGTTAGCCTGTTTCCTGGGAGATTCTAAATTGTGGTCAGATTCTGTTTTTATTCAGATGAACAAGATTAACTGCTTATTCAGATAACTGTTATTTTGGATAATGAGGATGGCTGAAGAAATGGAAAAGAGTGCAAATGAATTTACTAGCTGATGAATAGCTAGTGTAAGAGTTACATCAATGCCCGACTTCCATCAAGAAATGAAGCCACATCTTGGAGTATTATGGGGACTGTTACTATGATCTCAAAGACTGTGGTTATGAATTTGAAGGTAACAAAACATACATCTTCTGTTACTAACTTAAGCCATATACGTCATCTCTATGATTGATTTTTTTGACCCCGGTGCTTTTACTTCTGTTTCTGCCAAACTTTGGCCTACTCTATGGGGAAGGTGAGTGAGTAAAACTAGTAGTTAGGACAAATGTGAAGACTGTGAAAAAACTAAACATGTTCTTCAGAACGAGATCCTAGTCAGAGAACAGTAGTGATCAAAGTGCAAACTGTTGGAAAATCTGGATATATGTACATCTGTACATGTATATAGTGTATAATATGTATGTATATGTTATTGCTCATATGCAGAAATCTATCCATTTGAAGACAGCCCAGGTGGATCAGTTTTCTAGTAGAAAACCATTTAGGGCCATTCAAAACCATTAGGGCTGATGGGTAGAGTTAGAGTCTACTCACTGGGGATTTATTTGCTGTCTTTTGAAGCTACAAAGCCAAATGAACAAAGCTTGAAACATAATGGGACCATCATTTAGGTTATTGTTTGCCTGGAGTCAGAAGAATCTTTATATTTGAATATTTAACAGTTGGTTTGCAAATTTTATTGGCACCTCTTGGTTTTGAGTGATTCCTCCCCACCAGATCGTTTGAGAGTTTGGGGGTGGGCTTCTCTGGCCATTCAGATAAAGGGCCTTATCCATAAGTGGACAGGTTTCCCCATAGGGACCATTACACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGATTTAAAATCACTCCACAGTATTGATAAATAGCTCTATATTTTCAAGGTGCAGAAGAATTCCACAGCCTTAATTATTTCAGTGTCTTGCTGGTCTGCCTTAAGTGTATCTTCTGGGTTTTTGGTTGTCTCATTATTTTTAAATTTTTCTGCAGTTGTTCATTTTGTATGCACACAATGTTGTTTTGTAAAGGTAGGTTGTAAATATTTTATTTGTAAGTCAAAATCACTCATGTGTAATGTTGTAAAGTGATGACTTGCTGTCTTGTTATTATCATTACAGTAAATGCTCTAAGTTATGGATGAAGCTTCAAAATGTACATCTCAAGTTATGCATTCCTATAAATAT EMBV3_13704 CTCTGGCCCTCACCCAGAGCATGGACATGAGCTTTCCAAGAAAACGGTTCACACATCATT Gene GeneID:510978|PMM2:NM_001035095:132_cdna Constitutive 0 NULL GeneID:510978 25 GENE PMM2 MGC127449 phosphomannomutase 2 EMBV3_23002 CTCGGGAGACAGCGGCAGCCCCAGGCCCAGAAGAACAAGCTCTTGGAGCCATCCGAACCT Variant GeneID:513585|C14H8orf33:NM_001046153:86_cdna 80^307 2 EMBV3_33533 GeneID:513585 14 GENE C14H8orf33 C8orf33 MGC137664 chromosome 8 open reading frame 33 ortholog EMBV3_03805 TCTTCTGACCACCCTGGGGAAGGTCTCTTATGAAGATGTGGATCGCTTAAAAGGATTGGC Gene GeneID:527805|LOC527805:XR_083654:13_cdna Constitutive 0 NULL GeneID:527805 4 PSEUDO LOC527805 NULL similar to KIAA0895 protein EMBV3_10063 TTTGTTCCCGGGGACTGCCGGTTGGTGGAGCCCCATGTCATCGTACACTGTGCAGCAGAG Variant GeneID:614177|MAT2B:NM_001046526:17_cdna 121^315 1 EMBV3_03551 GeneID:614177 7 GENE MAT2B MGC137399 methionine adenosyltransferase II, beta EMBV3_01448 GGCTGGGTAGGAGGGAGAGCCAATGAGGAGAGGCCTTTGGGAACTGTAAATCATATTAAC Gene BVV0102_119576 - 0 NULL GK000004.2:92444889-92617108 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189420 1 XLOC_115459 NonCoding TCONS_00189420 XLOC_115459 NonCoding NonCoding - 4:92601399-92602735 - TSS141788 1336 1 TCONS_00189420_1 60 0.245508982035928 1 0 0.000193494283945141 0 0.000242431836868178 4.35098036418022e-05 1.47819801976697e-05 8.56776317028303e-05 0 0 0 0 1.71346309922972e-06 5.35283693564784e-06 0 0.000285197348807462 0 0.00152222378856053 0 5.63419703943275e-05 0 0 0 0 0 3.76451180422181e-05 1.03719714288485e-05 0 0 0 2.54358215360603e-05 0 XR_233006.1 LOC100848501 PREDICTED: Bos taurus uncharacterized LOC100848501 (LOC100848501), 8e-23 113 74.02 0.151946107784431 NM_019018.2 FAM105A Homo sapiens family with sequence similarity 105, member A (FAM105A), mRNA. 3e-28 131 74.69 0.176646706586826 0 noncoding 0 0 0 0 0.163187048608107 0.169780574281447 0.00797483140552807 0.86721935438461 ATCACAAGGGTCCCTTAGAATGGAAGAGAAAGGACGATGTGACTATGGAGAAAAGGCTCAGATCTGACATCGCTGGCTTTGCAGATGGAGGAAGGGGACCATGAAAAAAGGAACATAGACAGTCTCTAGAAACTGGAAAAAAACAAGGAAACACATTCTCCCATTGAGCCTCCAGAATGGAACACAGCCCTGCTGACACCTTGGTTTTAGCCCAGTGAGATCCTCTTTCAGATTTCTGATCTCCAAAACTGTCAGGTGATTATTTTGTGTTGTTTCAAAGTCATCAAGTTTGTGGTAATTTGTTACGGCAGCAGTAGAAAGTCAATATATGTAATATATATATATAAAATAACATTTTTCCCACCTCATATTTTTAAAAGTATGAATCTTCTTCTTGGGAAGACAGTGGAATAGGGGAGCTAAAGTGGGAGTTAGGTAACAGTTTACCAACATAGAGTTAATTTATCATTGTATTCTGTTATCTAGTACATGTGATGTCAGACATTAATAATAATTACATTTTATAGTACTTTATACTTTTCTAAGAACTTTAATGTACTATTTGATTTGATCAATGAACAAACAAAAATCATCACAATAACTTTGAGAAGCTCTGCAAATTCACTGTTTCCCTTTTTGACAGATTAAAAAGAATGAGTCACAAAGAAATCCCAGAGACAGGTAATGACAAAATGAGCTTTCATCTCTTCCAGGGGTGGTTCTTAGCCCTTAATATCTTACTCTTTCAAAGAACTTGGGTCCAGGATACTAGAAACCAAAAGCCCACTTTCCTAAGGACATCTGTATATCTGCAGGCATTCTGCTACCGTACCTAGCACTTAGGGAGAGAGGTCAAAGACATTAAGTTAATTGAAAGCTTCTACCTTGGGCTTGCAATGACCTGAAGTCTGGTAGGCAGGCAGGCCTAGCTATTTCAGACTTTATATCATGTTAATATGATTTACAGTTCCCAAAGGCCTCTCCTCATTGGCTCTCCCTCCTACCCAGCCTCCACCCTCCTCTGAACTCTGGCAGTAGCCTTGTGGGCCAGGGGTTCGCCAATGTCTGATACTGAATCTCTGGTTTGAACGTATCCCTCTGGCCTGTCTTACTCTGGTTTCCAGAAGTAGAAAAGTCTACCCTGTTTGTGACCACTCGAAGCCCAACTCTCTATACAAGTCAGACACATCCTACAGTTCATGTCACCTACATTCTCACTCTCCAATAGATGCCCCAGCTTCTACCTTCCTCCCCCCCTCCCTTTCTACCTTCTTTTCCTTCAATAAATATTGAGGGCACATCTCTTCTGCATACTGCACAAGACACTTGGCATCAG TCONS_00184835 TCONS_00184836 . 3' 12396 TCONS_00184835 TCONS_00184836 . 3' 13731 EMBV3_01697 ATTGCTGCAAGTGGAGAGCTACTGTAGTTGTGGTGTGTGGGCTTCTCATTGCGGTGGCTT Gene BVV0101_003288 - 1 EMBV3_27759 GK000006.2:92241547-92297158 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14130 AGAGACTCAGATACTGTAATAAACGCCTGTTATCCCACTCCTACTGCCTCCACCAGGACG Gene GeneID:788881|LOC788881:XM_002693229:467_cdna Constitutive 0 NULL GeneID:788881 15 GENE LOC788881 NULL similar to olfactory receptor MOR8-3 EMBV3_16066 TCTTGGTGGCAACTGGAGATGCTGACATGAAGGGACGGCACGCAGGGGGCCTGGGCAAGG Variant GeneID:534092|DDR1:NM_001076012:162_cdna 159^398 1 EMBV3_21752 GeneID:534092 23 GENE DDR1 NULL discoidin domain receptor tyrosine kinase 1 EMBV3_14536 GGACGAATGCAACCATTAGCACTACGTACCAACCACAGCAGCCAACTTAGGACCATGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25663 ATGCTGGCTTGTTACCCATAGTGGGTCCCTTTGGTCAGTGGCATGAGCATCTACATGTCA Gene BVV0102_145362 + 0 NULL GK000022.2:51934299-51944012 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127305 TCONS_00127308 TCONS_00127309 1 XLOC_077621 Coding TCONS_00127309 XLOC_077621 Coding Coding PFKFB4 22:51931082-51935672 j TSS95249 2249 2 TCONS_00127309_11 117 5 0.511004576160384 0.000664673945216641 0.000302890223793029 0.000163243462393579 5.541528085316e-05 7.94716947918762e-05 3.43195097849659e-10 5.98435437937185e-23 0.000133613280262545 2.42059750966355e-09 0.000505048904905975 0.000137342491633385 2.28966233813165e-10 1.27574786080438e-06 8.36631813196807e-05 4.70939562550786e-05 0.00210169818787171 0.000351909741091107 0.00264657937934343 1.74905124661953e-11 1.26654380276956e-10 0.000252584659011359 6.0548113126942e-25 0.000799219603536407 0.00338797342733768 2.79676915873547e-10 1.57499608692228e-05 7.12382636132923e-05 0.000679974962845788 1.09263923556916e-09 0.000994842445606949 XM_005222874.1 PFKFB4 PREDICTED: Bos taurus 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (PFKFB4), 0.0 3968 100.00 0.977767896843041 NM_004567.2 PFKFB4 Homo sapiens 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (PFKFB4), mRNA. 0.0 668 69.83 0.717652289906625 TCONS_00127309_1 sp|Q16877|F264_HUMAN F264_HUMAN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4; 9e-60 192 100.00 0.989130434782609 0 noncoding 1 1 1 1 -0.0877162141463012 0.42154645525711 -0.00501422097570885 0.927847838482232 CAGGGCTGGGTCTCCTAGTGTAAAGCTCTGAACCTGCCAGGCCCCAAGTCCTACGAGGACCTAGTCCAGCGACTCGAGCCTGTCATCATGGAGCTGGAGCGGCAAGAGAACGTGCTGGTCATCTGCCACCAGGCTGTGATGCGCTGCCTCCTGGCCTACTTCCTTGACAAGGCGGCAGAGCAGCTGCCCTACCTCAAGTGTCCGCTGCACACGGTCCTGAAGCTGACCCCCGTGGCTTACGGTTGTAAAGTGGAGTCCATATTCCTGAATGTGGCAGCCGTGAACACACACCGAGATAGGCCTCAGAATGTAGACATCTCTCGGCCTCCAGAGGAAGCCCTCGTCACGGTCCCAGCTCACCAGTGACCGTATCTCGTCCACTGTGACCCCCCGGCCGGCGTTGATCCCTGTGGACAGCAGTCATTCCAGGCCCACTGGTCTGTGTGACAGTCACCGCCCAGGAAACGCCCTCAGAGCCATGATTGGCTGGTGGCACCCAGAAGCCCTGCCCCAGCCCACCTGTTTCCTTGTTGGCAGCCACAGGGCTGTATACGTGGTGTCTGACCTGCTGCTGAGCATCGCTCGCCTGACCGCGTCTGCCCCCAGCTGGTGAGAGGGCTCCCACACCTGCTCCTCCTGTTCTCTCTCACCAGCCGGGGGGCCTTGTGAAGCATGAAACCCCAAAAATGTGAAATGGAAAGCACTTGCTGTGATGTTTTCAGCCACCGAGGCTGCGCTGCCTGGGTGGACCTGGGGACCCTGCCAGGGTTCTGCTGACCTCTCTGCAGCTACTTCTGGAGCCAGAGGCAAAATCTTCAGGGAATCCTGAGCTGCTTCTGCCCAGTCAGCAGAAGTAAACCCTCTCCAGCCCACCCTTCCAGGAGCTGAAGAGCCTCCAGCACGGCAGGCAGCCCCCTCCCCAGGCTAGACCCTGGGGTCCCTGCGTCTGCATTGGCAGATGCTTGGGAAAGCAGTGTGTTCACTTTTGCACATGGGGATACCCAGAAACACAGAGGGAGGGGGGCATTGGCAGTCACCCTTTCCCAATGATGCCTACACTGGAATACTTGTGGGAGCCGGTGGCCAAGGCCACCCCTGCCCCAACTGCTCTCATGGTGCAACACGTAAGCTGGAGCAACACAGAAAGACATGAGGACAGAGCTCTTGTACGCATCCCCCTTCCCAGCGCTTGAGGGAGAGGCTGCCCTCTTCAGCTCCCAGCTGTGCCACCGGCTACCTCGACTGCTGCTGCCGGTGTCCACACACGAGTATACACCGGTGGCCTGACCTGCGTTTGCTGTGAAGGATTTGAAAAGCCTGTCCTGGGGTTCGTTGACTTCCACCTGGGGGATGAAGCCTGGGAAAGGCAGGAGCTGGAGTCAGCCCCTGGCCTGGGAGGATTTTCCCAGCCACGTCATCACTTTTGATTCTTGTACTAAAGAGCCTGATGAAGACAACCTCGGGAAGCCTGCCGTCATGCCCCTGAGTTCTCTGGGGCCCAGAGAGGTGGGCTGGGCAGTAGATTCCAGCTCCATTTTGTAGCTGGGAGAACAGACTAGCCAGCACCTTGTGAGGCTGGGTGAGAATGTGTGTGGATTTGTAGTTGGATGTGCTGCTGTCCATGGGTGGTGGTCCTGGGTGAAGTCAGGCCCAAGGATCCCGTGACCCTGGCCTGGGCTGATGGCCTCAAGTGCCGCAGCAGCTCTGGCCAAACCTGGGTGGGGAGATGCCCAGGACAGGGCTGTGGCCCGACATTCCATCGGAGCCCCAGGGTCCTTAGACCTGGGGCCAGTGGGCCATGCTGCTGCCTTTGGGACTCGGGGACTGCAGCCTTTGCTTCTGTGGCCGCGAGAGTCTTGGTGACTTCCGGCCATGCTGGCTTGTTACCCATAGTGGGTCCCTTTGGTCAGTGGCATGAGCATCTACATGTCACCACCTCTCCAGGACCTCAGGCTCACTGAGGTGAAACCAGCGAGGCCTCTCTGTTCAGAGGGCCGCCAGGGCCAAATGTGTCACAGGACTGGGAGGGGGCAGAGGGAGGTCTGGGATCCCAGCAGGGGCTCACCTTGAGCTGGCTCTCTGCCTGGGCAGCATCCACCTGGCCGGTTGCCCACTTACAGCCGGGACGGTCCATGTGGTCCTGTTGCAGACGTTTTTCCTCCTCGTCCTGGAATGGATGTTGTTGGAACTCAGCCACTCGTCACACTGTGTCCAACATTTTCTGCAATAAATACTTTAAAAAAGAATAC EMBV3_42363 TGGGCTTAAGTCAAGAACACAAGAGCCCTACCGTCTTGGAGCTAGTTCTCCCACTCTGCC Gene BVV0102_033834 + 0 NULL GK000013.2:23234906-23251284 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042260 TCONS_00042275 TCONS_00042265 TCONS_00042276 TCONS_00042267 TCONS_00042266 TCONS_00042271 TCONS_00042270 TCONS_00042273 TCONS_00042268 TCONS_00042269 TCONS_00042257 TCONS_00042258 TCONS_00042261 TCONS_00042264 TCONS_00042272 TCONS_00042262 TCONS_00042256 TCONS_00042274 TCONS_00042259 TCONS_00042263 1 XLOC_025629 Coding TCONS_00042275 XLOC_025629 NonCoding Coding MLLT10 13:23231267-23242540 j TSS31506 6225 3 TCONS_00042275_11 80 0.448353413654618 3 0.448012775017743 0.00153771008638186 7.43031803973883e-06 0.00169190379060349 8.83914082176137e-21 9.11501872080145e-120 2.13918312975228e-125 2.72918696969428e-05 0.000482366255021493 3.25085704492663e-10 2.14786787925881e-46 1.14047269000563e-54 8.79136913121472e-75 8.17503709619101e-67 3.64566401306424e-70 0.000515132984268972 1.51055988752087e-05 1.07933133678128e-107 4.4405821396233e-222 0.000521135457604707 0.000672825389379015 0.000294861218550007 9.73390880985456e-89 0 1.48464604918107e-122 0.00212618419053762 0.00100445087228502 0.000452840113295217 0 3.02867611089031e-06 0 XM_005194278.1 LOC519864 PREDICTED: Bos taurus protein AF-10-like (LOC519864), transcript 0.0 3534 100.00 0.314538152610442 XM_005252605.1 MLLT10 PREDICTED: Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (MLLT10), 0.0 1907 81.61 0.306827309236948 0 noncoding 0 0 0 0 -0.0221482005491622 0.870574055193912 -0.00420418722755855 0.937381975541778 CAGAGGAGAGAAAAGGTGTGGAGCAGATATCTTGGAGGAGGGGAGCAGCACCAGGCACTTCTATACCAGCTGGTGCAACAGCACCACCAGCAGCAGCAGCAGCACCACCAGCCTGATCTCCAGCAGCTGCAGATCCCGGGACCCACGCAGATACCCATCAACAACCTGCTTGCAGGCACGCAGGCGCCTCCACTTCACCCAGCCACCACCAACCCGTTCCTCACCATCCATGGTGATAATGCAAGTCAGAAGGTAACAAGACTTAGTGATAAAAGTGGGCCTGTTGCTCAAGAGAAAAGTTGACACTTGAGAAAAAAACATCTAGAAATGGCCTATCCTGCTGTCCTGGCACTTCATCTGGCTGCTGTTGCAGTCCTTTTACTACACCTATGAAGAAATGCAACAAGAAACCAGCTGCACGACAAAGGATTAATTGCCACAAGAGCATTCTTGTAAGGCTTTGGTTGATGTTGCTTTGTTGCACTGAAATGAAATTCCCATATCCCCTACCCCTCTCCCAGATTTTTTTGAACTTTGAAAGAAAATTTAATGGCTAACTTTGGTCAGTGAAATAATTTACATGGCAATGAGTTTATCAACCTAAGAGAAATTTAATATAGTTGGTACACAACTAATTTTGATTATAAATTGCAGAGATGACTAGGAAAACTAAAGACTTGTTCCATTTATAAACCATTTGATTTTATTGTACCAGTTGGAACATGAAATATGATCTTTTGTTTGGGTTACAGTACATTTGCTCTGTGAGTCAAACCTTAGAACAAATTTCAAGGAACTGTTTAATTTCTTCTTCTAGAGTTTTATTGGTTAAATATTACAAATAAATAGGTCATCCACTGGGACTTGGCAATCTTTGTTATAAAAATTTCCTTTCTAATGGGATTTGGCCAATTTTGGTAATCAAGTTAGGATGGTAAATGTCTGCTTCTGCTAAAGGTAATTTTCTTTTGCTAAATGCTTTTTCTTTAGTGTTAAGACCTACTCATATTTTGAAGAAACCTCGAGTTAAGTGAGCTCTAAGGCTGCTGGGGAAACCAGCTCAATTCAAAATGAAAGAGGGGCCACTCTGGAAACTGCTGGTAGGGTTTGGCCTGAATCAAGTGCCTGTTAGTACCTGCCTTGTGCTGAAGTGGCTCTGGTCAGCTGAGTAGCAACAGCAGCCTTCCCCATGGTTCTGCCTTTATTGAGAACTTTCTATGCCACTGTAGATAGCTCAGGCGAAGCTATTACCTGGGTATTTATCCACTAATGAGTCACAAGAAAAATGTGTGGATTTGGTAAGAATTTTCTTTTTTTCTTTAGACAACTTCTCGTTGTTAACAATGATTTCAAACAGACAAAATAAGACCAAAAAAAAAAAAACAAACACCACCACAGCAGTTCCTGAAACAAGTGAAATCTATGTTACACCCCTTCCACGTTGGGTAGCCCCATTCCTGGGGTAACAGTGTAGCAGAGTATATAAATTAAACAATTGGGGATGTAATCACTGAACTGTTCTTGAATGTGTGAATTATTAGTGGAAAAAAGACCCAGATATAATTAGACCTCCACTGTGTACTTAGCTGGAAGAACATGTTAATTCTGCAATATGTCTCTTGGTTAAACATTGCACAGTTCTTACCTCATTTCTGTAAATAAGGTTTTGTGAATCTGTTTTGTATTGTGAAAAATTCATAAGATAACATTGATATTTTGATTTGTAATATTTCTAATTGGTAGATTTAATTGAAAAGTAAAATTAATTTATTTTTATATGTTCAGGGGAATTTTAAAGAAAGTCAAATCTTTTGTAGATAATTAAAAAAAAATCGGTGTGGTTTATTTTACTTATTTAACCCACTGGTTGTTATTCTGTAACAATTTGTATAAATGGTAAATTTTGAATGTGTTGTTATTTTACTTAGATGTAAAATTCCACATGTATTAAAGAAAATGTACAAAGTTTTTGTTAATAAAATTTAATGTTTATAACTGCCATTTTCCCCAGTTTTATTAAGATATAATTGACATCAGCATGGTATAAGTTTACAGCATAAAAATTTGACTTACATATATTGTGAAATAATTACCATAGTAAGTGTAGTTAAACATCCATCTCATACAGATACCAAAAAAAGAGAACAGCAAAAAGTTTTTTTCCTTGTGATGAAAACTCTTAGAATTCACTCTCTTTAACTACTTCTCTATATATCATGTTAACTATAGTCATCATGTTGTACATTACAGCCCTAATATTTATTTATCTTGTAACTGGAAATTTGAACTTTTTGACCACTTTTGTCCAATTCCCTCTCCCTCACCCCACCTCTTTTCTGTGAGTTAGATTTTGTTCTTTAAATAAGATTCCACATATGAGATTGTACAGTATTTTGTCTTTGTTTGACTAAATTCACTTAGCAAAATGTCTTCAAGGTCCATCCATGTTGTCACGATAGCAGGGTTTACTTCCTTTTTATGGCTGAATAATACTCCATCACACATGCACACGCACATGTACATAACACAGCAACTTCATCCATTAATGGGCATTTAGATTATTTCCATGTCTTGGCTAATATGAATAATGCTGCTATGAACATATAAGGGTATAGATATCTCTTCAACATAAGTGTTTTTGTTTCCCTTGGATGTGTTCCCAGAAGTGAGATTGCTGGATCAGATGGTAGCTTGATAATAGCCATCCAACAGGCATGAGGTGATAACTCATTGTGGTTTTGATTTGCATATTCCTAATGATTTAGTGATGTTGAAGAACTTTTCAAATGACTTCTTATATATCTGTTGGCCATTTGTAGGTCTTCTTTGGAAAAATGTCTGTTCTTTGCCCATTTTAAAATTGGATTTTTTTTTTCCCTATGGAGTTGTATGAGTTCTTTGTATATTTTGGCTACATTAATCCCTTATCAGATACATGATTTACAGATACTTTTCCCCATTCTGTAGGTTGTCTTTTCAGTTTGTTGTTATATCTTCTTGATGGATTGACCCCTTTTTCATTATATAATGACCTTCTTTGTCTCTCTTTAGTTTAAAATCTGTTCTGATATATAAGAATAGCAACCTCTTCCTGCTTTTTGGTTACTTCTGCTTGAAATGTCTTTTTCCATCCCTTCACTCTCAGTTAATTGTCTCAAAGACTAAAGCAGGTCTCTTGTAGGCAGCAGCATATTGTTGTATCATTTTTTAAAAAATCCATTCAGCCATTCTTTTATTTTTATTGGGGAATTTAATCTATTTTTGTTTACAGTCGTTATTGGTAGATACGGGCTTAGACTATGGCCACTTTGTTGACTGTTTTCTGGCTGTTTTGTAGACCCTTTGTTCCTTTTTCTTTTTCCTGCTGTCTTGTTCTGTGTTTTGAGGTTTTTGGGGATCAGTATGCTTTGACTTCTCCATCATTTTCTTTTTGGTGTAATTACTATAGATTTTTCTCATGTGGTTACATGAAAATTATAACACACCCTATTTTAAGCTAATAACTAAACTTACACAGCTTAAGTCCTGAGCGTCACACTTTTACTTCTCCTCCCTTCACATTTTACTGATGTTACAGTTTACGTAGTTTTCATATTGTGTACCCGGTAACAGATTTTTATAGTTATGGTTCTTTTTACTGTTTGTTTTTTAACTTTGAGTTGTAAGAGAATTATGTGCCACCATACTGTATTACAAAATCTACTTTTGAATGTGTGTTTATAATTACCAGTGAATTTCATGCTACCTTCCTTTATTTTTATGATGTTAGTTAGCATCCTTTTACTTCCACTCAACTCCCTTTAGCTTTTCTTGTAAAGCATGTCTCCTGGTGATGGGCTCCCTCAACTTCTGCTTGTTCAGGAAAATCTTTATCCTTCCTTCATTTCTAAAGGACACTTTGGCCCCATACAGACTTCTTGGTTGACGGTTTTTTACTTTCAGTATTTGGAATGTATCTCCCATCTTTCCTGGCCTGAAGTTTCTTTTGGGAAATCTGCTGATAGTATTAAAAATGAGGTTTCCCTTGTATGTAACTTCTCTCTTTGACAAAAATTATTTGTCTTTGACTTTTGATATTTATAATGTGTCTCGGTGTAGCCCTATTTAGGTTCAACCTATTTGGGGTCTTTTGGACCTCATGGATCTGTTCATACCTCTCCCCAGGTTTGGGAGTTTTTAGCATTATTGCTTTGAATATGCTTCCTGTCCCTTTCACTTTCTCCTGAAATTTCCATAATGCAGATGTGGGTTCTTTGATTGTGTCCCATAAGGCTTTCTTCGGTTTTTCACTTTTTCTCTTGTGTTCCTCTAGGTAATTTCAAATGTCCTGTCTTCTAGGTCGGGATGATTCTTTCTCCTGCATCTTCATCTTTTTAAAGCTGTTGAATCCTTTGATCGTATTTTTCAGCTCTAGGATTTTTGTTTTTAATGGTTTCTATTTGTTGAACTTCTCATTTTGTTCACGAATTATTTTCCTAATTTTGTTTATAGTTTTGTGTTCTTGTAGTTCCCTTAAGAGGATTATTCTGAATTCTTTGACAGTTCATAGATCTCCATTACTTTAGTGTCAGTTATTAGTTTACTTTGGTGATGTCATGTTTATGTGTATTTTTGTGAGTAAATGGGCTTCTCTTCCAGGTTTTACAGGTTTGTCTTGGGAGAGACAGCTTTTCACCAGTCAGCTCTGTTGAGGTTTCTGGATGTGTCTACTGGTAATGCTTGTGGGCAGGTGGGGTCTGCTATATTAGGGTCTGTTTTGGGGCAAGGCCCCTGCCCAGAGCCCTGAAAGGTGGGAGGGCAGGAGTGGTGTTGCTGCTGAGAGGTCTTGGATAGGAATTCTGGCTTGTTTCCCTGCCCTAGTAAGGCTGTAGGATGGGCTTTGCTGTTGCCTAGGGCCTCTGGTCAGGCTTATCCGGCTTTTGAGACTGGGTACTATACACAGTAGTAAGCAGAACTCCGAGTTTGCTTCCCTCCCTGGCGGGCACCGTTGTTTAGGCCTCCTAATTAAGCCAGACGGCACTGAACTCGCTGGTAAGACAGAGAAGCACGGGCCGTGCACTAAATGCCACTGTAAGCATGGCTCTGGGATGGGCTGCCCGATGTGCTCCTGTTAGGCTCCCTGGGTGAGCGCTTGCATTTAGCAGTGGGTGGGGGTACAAATTGGTTCCCTGCCCAGGCAGAGTGGGAGAACTAGCTCCAAGACGGTAGGGCTCTTGTGTTCTTGACTTAAGCCCACCCGTGTCTCAAGTTCCCTGGCTGAACAGGGTCACTGGATGTGTTCAGCAGAGCTCGGCTTGCCCAACTAGGTTCCAGGGTTGCTGGGCTGTGCCAGCTTCCCTGCGTTCTTTTCACGCTCTTTGGGCAGGTGGGCCGGGGAGCCTCTCTCAGCAGTGGGCGGGGCGTGAATGAAGGTCTGCTGGCTTCCCGGCATCCTCTCTGGTGGGCGGGCTCTGAGTGAGCTCGGGCCTGAGCGGCGGGAAACTCACTCCAGTGCCGGCGTCAGGCTCCCTGCCCTTCAGCACCGGTGAGATTCGCCGCCGAGAGCGACTGCTCCCTGGAGTCTGCAGGTAGGACTTCAGTTTTGCCGAGGCTGTTAGCCCCGGTGCCGTCTCCGCCACAGCGGACGAGGCATTGAGGCCCTCAGATTCCCCTGCTGCTGAGGAGGTGGAGCTGGAGTAGGCGTTCCTGTGAAGCATCCCATGGTTCTGGATATCCACCTAGGGACCCTCGGAGGCTCAGGGTGCCTCTGGGTGGCGCTGTGCTGGCCCTGAGGCAGGGGCTGCACTTTGTTACTCAATTTACTAATTAAGGCCAGTAGTGTGGACGGAGCTTCAGCCTCAACCCCTTCCCGCCAGGTCTAGGGTTTTTTAGGGGCGTCCTTTTGTGAGGCCAGTGAGGTCAGAAGGCCTTGTGTCACCTGCTTGTTGACGTCCGTCTTGTTTGGAGAAGATAGAGCTCCTGACGCCCTGGTGCCCTTGGTGTCGGTTGGTTCCAGGAGCCTCTGGGTGCTTCGTGCTCTGTTGTCGGTGCGGTTGCATCTTGGGGTTGTTGAAACTCAGGAGTAGACTCCATGCAGCGTGGAGAGCAAACCAGCCTGCAGCCTGCTGTTAGGTGAGACAGAGCGCCCCTCAAACCACCGGTGCAGAGAGGAGGCAATGACCACAGTGGAGAAGACAGGAAGGCACATCAGTAAAGCTGTATTCGTACTTGGTAAAAAGTGAGTTG EMBV3_24182 ACAAAGGCAACCTTCCCAGGTCTGACATAGCCCCAGCCTCAGGGCTGGCCTGATGGGAGA Variant GeneID:523737|DPM2:NM_001046268:121_cdna 726^778 2 EMBV3_03019 GeneID:523737 11 GENE DPM2 MGC137183 dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit EMBV3_39325 TGCTTTGGATGTGGGACGAGGCCCAACAGTGGAACTAAGACAGGTTTGTCAAGGGCTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11844 TTACCTCTAAATGAGGGAAGGAAAGGGTAGGGGTGGGACATGGGCGTCTTGTGGATGTAG Gene GeneID:508439|LOC508439:XM_002685735:468_cdna Constitutive 0 NULL GeneID:508439 2 GENE LOC508439 NULL similar to CG2943 CG2943-PA EMBV3_06733 CATTCTGAAGGATACCAGTGAAGACATTGAAGAGCTGGTGGAACCCGTGGCAGCTCATGG Gene GeneID:511803|PSMD1:NM_001101077:97_cdna Constitutive 1 NULL GeneID:511803 2 GENE PSMD1 NULL proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 EMBV3_39866 ACTCATTTAGAGCCACCTCCATTGCGGGTAACAAGCAAACCCCCAAACCTTTCCTTCTGG Gene GeneID:515531|HPS1:NM_001075716:141_cdna Constitutive 0 NULL GeneID:515531 26 GENE HPS1 NULL Hermansky-Pudlak syndrome 1 EMBV3_39770 GGAGTCCCGATATCCAAGCGAAAGAAGAGCTATGGAAGCATATCCAAAAAGAGCTTGTGG Gene GeneID:519867|EPB41L4A:NM_001105384:12_cdna Constitutive 2 NULL GeneID:519867 10 GENE EPB41L4A MGC160079 erythrocyte membrane protein band 4.1 like 4A EMBV3_37576 CTTTCTTCTCTAAGGCAGCTTCAGCTCAGGTCAGCTTTTGGCGACTCCCTTTCCGGTGAA Gene GeneID:768236|ZC4H2:NM_001078111:127_cdna Constitutive 0 NULL GeneID:768236 X GENE ZC4H2 KIAA1166 MGC143055 zinc finger, C4H2 domain containing EMBV3_07584 CGGACCAAGTGGGAAAGTCTGGGCACAGGCCTAAACCTCAGGAGCTGAACGTCATCAACT Gene GeneID:511008|EDEM1:NM_001103092:29_cdna UTR3_Alt 2 NULL GeneID:511008 22 GENE EDEM1 MGC165902 ER degradation enhancer, mannosidase alpha-like 1 EMBV3_42865 CGACGGTTGACGGAGGCCAGGAACCTGAAGGCTGTTTGCCTGTACCATTATTCAATCAGA Variant GeneID:539692|SPATA22:NM_001038186:153_cdna 73^190 2 EMBV3_26167 GeneID:539692 19 GENE SPATA22 MGC134099 spermatogenesis associated 22 EMBV3_33527 CCTTAGAGCAGCCTTTCCAGTTTTCCCAAGAAGACATGCCCCGAGTGCGGAAGAGGATTT Gene GeneID:100298192|LOC100298192:XM_002684824:143_cdna Constitutive 0 NULL GeneID:100298192 1 GENE LOC100298192 NULL similar to SUMO1/sentrin/SMT3 specific protease 3 EMBV3_40703 TTTTTTCCCTGGTTTTATAGTTAAAATACTGTTTTCCATCTTATTTAGGTAATTCACTTA Gene GeneID:539603|SASH1:XM_002690315:7_cdna Constitutive 2 NULL GeneID:539603 9 GENE SASH1 NULL SAM and SH3 domain containing 1 EMBV3_22993 GTCTTGAGGGGGAACTGCCCTGCTTAGACATGGAGAAGAAGCTTGCCAGGGTGTGTAAAA Gene GeneID:100335461|LOC100335461:XM_002684589:114_cdna Constitutive 0 NULL GeneID:100335461 1 GENE LOC100335461 NULL hypothetical protein LOC100335461 EMBV3_29149 GGGCCCACACCAATTCCCGCCTACTGATATTGAGAGCAGAAGATTACTTGACTGGCCTCT Gene BVT0102_161018 + 0 NULL GK000011.2:102196460-102286503 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029214 1 XLOC_015688 NonCoding TCONS_00029214 XLOC_015688 NonCoding NonCoding - 11:102255239-102257812 - TSS20361 2334 1 TCONS_00029214_11 145 0.452442159383033 2 0.0933125972006221 1.31113237000517e-16 4.07104181948077e-05 5.61181771081337e-15 7.45700263364014e-18 1.36896881626931e-36 2.21450404553319e-10 1.13989428743068e-19 0 0 0 0 0 0 0 0 0 0 0 6.13493374166952e-13 2.59331378074305e-05 0.000132648337600712 0 0 0 1.33483307406878e-13 6.83272799801716e-18 1.51833996624704e-05 0 0 0 XM_005223069.1 CCR9 PREDICTED: Bos taurus chemokine (C-C motif) receptor 9 (CCR9), 3e-43 181 87.16 0.0629820051413882 0 noncoding CTACATGCTGTGACTAAGAGTTGGCATGCCACAATTAAGACCCAGCACAGTTAAATAAATATTAAAAAAAAAAGAGGTCACATGGCCAGAAGGTTCCAGGCCTCTGCCTCCCGGCACAGGGGGTGGAAACAGACCCAGAGGTCTCCGCACCAGCCCAGGGCCTCGCTTCGTTGTTGTTCAGTCGCAAAGTTGTGTCTGACTGTTTGTGACCCCATGGACTGCAGCCCGCCAGGCTCCTCTGTCCTCCACTATCTCCCGGAGTTTGCTCAAACTCGTGTGCATTGAGTCGATGATGCCATCCAGCCATCTCATCCTCTGGAGTTTGCTCAAACTCATATGCATCAAGTCGGTGATGCCATCCAGTCATCTCATCCTCTGTCGCCTCCTTCTCCTCTGCCTTCCATCTTTCCCAGCATCACGGTCTTTTCCAGTGAATCAGGCCTTCACATCTGAATTCAGGTGGCCAAAGTATTGGAGCTTCCTCACTGCCTGGGGGGGCTAAACTCCATCCCCCAGGACTCCAGAGCCCCGGCTTCTATACACCATGCTTGGAAGTCAGTGGAATACATGACCCAGCAAGAGAGGGGGAAACACCTCTCTGATCCTTCCTGTGGCCTCAGGTTCTGGGGGTCAGTGAATTCAGCCACCCCCCAATTTAGCTACCTCTCCTGGTGCTGCTCCCTGGGCTGAGCTGGGTCCTGGGGCTGAAGGTGAGGGCGGTTATGGGTGGCCAGCTCACCCCTGAATGAAATCCAGGAGTCAGCAGGGGTGGCAGGCACTCTCACCAAGCCCTCACCAGCTCCTCCTGGTCAGAACCCCATTGGGGTCAAGGCCACCAGGAGAGGAGGTAAATAAGACACTACCAGAGCTGACACACAGGATGCACAGCCCGGGGCCCTTTGTCCCATCAGACGACATGGTCTCCAAACTTCTCCCAGCCCCGTCATTCAATGTTTCAGCCACAGTCGTGGACATTACGGTGTGAACCCACAACCATTCATGAGGTTGAACACTCCCTAACAGGTAAGTTCTGACATCATTCCCACTTTACGTGGTAGATAGATTTAAAGAGGAGCTCAGGGTTTCACACCAGTATGATCTGTGTGACTCTGGGGATGTGGTGATTGAAGTGGCCAGTCAAGTAATTTTCTGCTCTCAATATCAGTAGGCGGGAATTGGTGTGGGCCCCAAAGATTCCCTAAAAACTTAAACATGGAACTGCCGTATGACCCAGCAATTCCACTCCTAGGTATAGACCCAGAGGAACTGAAAACAGACACAACAGCAAGTACCCACACGTATGTTCACAGTAGTACTATTCACAGTAACCAAAAGAGGTTGTTGTTGTTCAGTCGCTCAGTCGTATCCAACTTTGCCATTTCCTTCTCCAAGGAATCTTCCCGACCCAGGGAAACACCTGCGTCTCTTGCTTTGGCAAGCAGATCCTTTACCTCTGAGCCACCGGGGAAGCCCACAATGGAATATTAATTAGCCGTAAAAAGAAACGAAGTGTTGATAACATGCTACAACCTTGGAAACATATGCTAACTGAGAAAGGCCAGCCATCAGAGGACAAATATTGTATGATTCCACTTTTAGAAGATGGCCAGAGAAGACATATTCATAGATTCAGAACACAGACTGCTCACCGCCAGGGTCTGAGGGTGTAATGCATAATGGGTGAGGGATCCTGGTTTGGGGTGATAGAAATGTTTTGGAACTAGATGGGGGGGTCAGTGCATAACATCATGAATGTACTAAATGCCAGGGAGTGCCACTTGGAAATGGTTAAGTTTATGTTATGTGAACTTCACTTAAATAAAATCGTTTTAAATAAAGAGTAGGGGTGAGTTTCGTTGCACTAAAATGGCCCCAGTAATGATGAGGGTTAGGCCTAAATGAGAGGGTTGGGAGAGCCAGTCCTTGGGGGGCTGTGCCCTTTGACGTCACCTCTTTTCTGTCCCCCCCCACCGGATGTGTGTGGCTCAGTGAGGATCCCAGAGCATCTGTATTTGCAGACTGTGGGGGGTAGGTCTGAACTCACAGCCCAAGACGGCTCGAAGGAGCCCAGAGGAACAAGCCATCACACTAAACTAAAGGGCGAGGAGGGGACACCCGGCTCCGCAGGCCTGGGTGAGAACATCTATGTCGTCTTGTTATGTCACGGGACATCACGGGCTGCCAGACGGAACTCTACGAGAACTCTGGCTCGGGGGAGTCAGTCTGGTCCAAGCCGGTCTCCAAATCGTGTCCCCAGAATCAAAGTGGTTTTACAACTTGTTCTCAAGGAGGAAAAACAAAGCTCTGATTTGTCGTGTTGGCCAATTTCCATGG TCONS_00026374 r 5' 29050 TCONS_00026374 r 5' 28692 EMBV3_33574 ACGATGACCTTCTTGGCACTTGTGACCGCACCCCAAAGTCTGGCTCACATGAGGTGTCAT Gene GeneID:369025|PRF1:NM_001143735:251_cdna Constitutive 0 NULL GeneID:369025 28 GENE PRF1 NULL perforin 1 (pore forming protein) EMBV3_06817 TTTTGCCTGGATAAGGAAGCGCTGAAGGATGAGTACGATGACCTTTCCGACCTCACTCCT Gene GeneID:317706|PGRMC1:NM_001075133:11_cdna UTR3_Alt 2 NULL GeneID:317706 X GENE PGRMC1 NULL progesterone receptor membrane component 1 EMBV3_38000 CGGGAACAAACTAGCCCTCAAGACGGGAATAGTAGCCAAGAAGCAGAAGACGGAGGATGA Gene GeneID:504587|C7H19ORF43:NM_001083371:23_cdna Constitutive 0 NULL GeneID:504587 7 GENE C7H19ORF43 MGC148960 chromosome 19 open reading frame 43 ortholog EMBV3_35288 CCTGCTCCTTTGGACAAGGTGTCGTGGCTGATGATTAGGAATTCTGGGGCCTGACCTTTG Gene BVT0102_001331 + 0 NULL GK000015.2:31240292-31312051 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07757 TGGTGGGAGAATATGATCGCGGCCCTTTTTCAGTGCCTAAAGCAGATGACCGAAGGACAC Variant GeneID:515375|NAAA:NM_001100369:62_cdna 695^941 1 EMBV3_10000 GeneID:515375 6 GENE NAAA ASAHL N-acylethanolamine acid amidase EMBV3_23169 GTCTACCGCTTCGCGACCGACAGGAATGAGTTCCGGAGGAACTTCATTCTCAATTTGGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39491 CAGGCCATCAGCATCCGGGACCACATGAACGCCTGGTGAGCTGGATGTGTTGGAGGACCG Variant GeneID:100271850|LOC100271850:NM_001145790:5_cdna 340^802 2 EMBV3_26133 GeneID:100271850 7 GENE LOC100271850 NULL hypothetical protein LOC100271850 EMBV3_25655 GCAGGAGCTTACCCACTTGGGAGAATGAGAACAAGATCCACTGCACACAAACTCTTCTGG Gene GeneID:282201|CRABP1:NM_181028:22_cdna Constitutive 0 NULL GeneID:282201 21 GENE CRABP1 MGC137596 cellular retinoic acid binding protein 1 EMBV3_09131 AGCCAGTGGATGTCCTTCTTTGGTGAGGCTTATGAAGGGGCTAAAGACATGTGGAGAGCC Gene GeneID:506412|SAA1:NM_001075260:13_cdna Constitutive 0 NULL GeneID:506412 29 GENE SAA1 NULL serum amyloid A-like EMBV3_22655 AGGCTGGTTGTGATAACAGGGTCTTGCAGCCGGGCCTTCCCGCCCCGTGTTGTTAATAAA Gene GeneID:540134|KLHL22:XM_002694683:259_cdna Constitutive 0 NULL GeneID:540134 17 GENE KLHL22 NULL kelch-like 22 (Drosophila) EMBV3_36280 TCTATTGAGGTTTCAGATGACACTGACCAGGAGGGGGATGACTGCATGGCGAAGCTCTGT Gene GeneID:521837|MPZL3:NM_001098051:92_cdna UTR3_Alt 2 NULL GeneID:521837 15 GENE MPZL3 MGC139235 myelin protein zero-like 3 EMBV3_01402 TGGGCATCAAGGTAAAGATCATGCTGCCTTCGGACCCGACTGGTTAGATTGGCCCTAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07469 CCGTTGTGTATATAAAGGTGTCCTTCTTTTGTTTAGGATCATAACTGTCTCTGCAGTCTG Gene GeneID:100138870|CLPX:XM_002690521:533_cdna Constitutive 0 NULL GeneID:100138870 10 GENE CLPX NULL ClpX caseinolytic peptidase X homolog (E. coli) EMBV3_23495 AGCCCCAAGAGAGAATACCATTTGACCGTGATACAGATCTCAAAGTTCATCGGTTTGATG Gene BVV0102_055839 + 0 NULL GK000012.2:15220762-15274613 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00034590 TCONS_00034591 1 XLOC_020715 Coding TCONS_00034591 XLOC_020715 Coding Coding KIAA1704 12:15203069-15234979 j TSS25529 1484 1 TCONS_00034591_2 389 9 0.953774797079194 0.00164776334259281 0.000591415221182223 0.00147207983532056 0.00121444527335993 0.00132150347129745 0.000542126989440089 0.0010357970838097 0.000897837719380805 0.00278789071844589 0.000989940696393915 0.000155515880070637 0.000134309591637832 0.000186985816836303 0.000602368810536362 0.000425979919993986 0.0088088491143815 7.18035996622639e-06 0.00355513062487919 0.00186851654890735 0.00352404330282901 0.000415576358922139 0.00259832255747761 0.00125050904146387 0.00434481929235274 0.00201472673757518 0.00229196042665118 0.00102324223734441 0.000907227276498 0.000495080027111497 0.0012728777175469 XM_005213638.1 KIAA1704 PREDICTED: Bos taurus KIAA1704 ortholog (KIAA1704), transcript 0.0 2060 99.74 0.774932614555256 NM_018559.2 GPALPP1 Homo sapiens GPALPP motifs containing 1 (GPALPP1), mRNA. 0.0 1314 86.92 0.720350404312669 TCONS_00034591_2 sp|Q8IXQ4|GPAM1_HUMAN K1704_HUMAN Uncharacterized protein KIAA1704; 0.0 562 88.25 0.894601542416452 1 coding 1 1 1 1 -0.364531784598704 0.461527290812011 -0.0290683485546859 0.694441018765926 GGTCAGCTCGGGGGCTGGGAACCACGCGGCGGGAGGAACGGCACCACCAGCCGGCTCGCCCATCGCCACCCGCCTGGTAGTCAACCCTGCGTGCGAGTGCGCAGCAAGCCTTAGGCGTCACTTCCGTTATCGCCAATAGCAAGGATCAGCCAATCACAAGCTGATATGTCATCGGCCGGCGCCGGAAGAGTTTCCCTCGCGTTCGGCGGCTCGCTGGCTGCCCGTCGTGGAGTTCTGACTCGGCTTGGAGACACTTGTGTGCGTCTGCAGTGTCTGACCCCGCGGATGGCGAGGGATCTGATTGGGCCGGCCCTGCCGCCCGGCTTCAAGGCCGGCGGGTCGGCGGAGGACGAGGAGCGGGACTCCAGCCCCGTTGCAGGACCGGCTCTGCCTCCTAATTATAAAAGCAGTAGTTCAGAATCATCAGACAGCGACGAGGACAGTAGTTCTTTGTCCGAAGAAGGAAATCAAGAATCTGAAGAAGACGACACTGGTCCACCGGCACGAAAACTAAGGAGAAATCAAGATGACGATGATGATGATGATGATGAAGGGTTTTTTGGACCAGCTCTTCCTCCTGGATTTAAAAAGCAAGATGATTCTCCTCCACGGCCTATGATAGGTCCTGCACTACCGCCCGGTTTTCTTAAATCTACACAGAAAAGTGACGAAGGCAGAAGTGATCCAGGACAAGTGTCATCAGATTTCAACTCTGAGAAGGAAACGGATAGCAGTGAGGAGGAAGACATTGTCGGGCCGATGCCTGCCAAAGGACCAGTTAACTCCAGTGTAACAGCAGAGTTTGAAAAGAGGGCCCAGAGAATGAAAGAAAAACTGACCAAAGGAGATGACGATTCATCTAAACCAATTACGAGAGAATCTTGGATGACTGAACTTCCTCCAGAAATGAAAGACTTTGGTCTCGGGCCCAGAACTTTTAAGAGAAGAGCTGATGGCAAATCTGGAGACCGATCAGTCTGGACCGACACGCCAGCCGACAGGGAAAGGAAAGCTAAGGAGATGCAAGAAGCAAGAAAGTCATTCAGTAAGAAGGATGAAGAATATATACCATCAGGAAGGGATAAGAGATTGGCTGAGCAAGTATCCTCATACAATGAATCAAAAAGGTCAGAATCTCTTATGGACATTCATCATAAAAAATTAAAGAATAAGGCTGCTGAAGATAAAAATAAGCCCCAAGAGAGAATACCATTTGACCGTGATACAGATCTCAAAGTTCATCGGTTTGATGAAGCTCAGAAAAAAGCCTTGATAAAGAAATCTAGAGAACTAAACAGCAGGTTTTCACATGGCAAAGGCAATATGTTTTTATAAGTCTAATGCTATTTCACACCGCCCTGAGGACAGTTTTACAAAATGTGAGGCCAAACCAGAGTTTTTTTGCCCTGTGGAGACACTAAACCCAATATAACAACACTGACAATAAAAGAACAAAACAGCTGTTTGCACAGGATGGAAAAGTG EMBV3_32805 CTCAAATAAGTAGTGGTAAGTAAAGGGGTACAGTGCCCATGGGTACACAGTTACCTGGGG Gene BVV0102_269474 + 0 NULL GK000030.2:48003084-48233343 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03927 TTTTCTGCAAATATCAAAGCCATGGCTCAGTCCTGGAGTCAAGATGTGAGACCAAGAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17145 CAGCTGGAGACTCTAAGCAGAGATATTTGAGTTGCCTACGAACACTAAAGTTTGGCACCA Gene BVT0102_437283 - 1 EMBV3_20378 GK000022.2:53486046-53492242 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15501 CTAGGAGTCATTCGATAGCCATATATCCTGTATTTTGTTGTTTTAAAACAGAACATTCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13407 AAGGTGCTTTGACAATGAGCCTTCTTGAAACAGGTCCGGGTGGAGAGCAGTACGCTCTTG Gene BVV0102_086091 + 0 NULL GK000007.2:45422868-45427303 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213172 TCONS_00213176 TCONS_00213177 TCONS_00213173 TCONS_00213171 TCONS_00213175 TCONS_00213174 1 XLOC_130397 Coding TCONS_00213177 XLOC_130397 Coding Coding MUM1 7:45407602-45424601 j TSS159778 3861 1 TCONS_00213177_2 344 11 0.77350276503118 0.00108006684474037 5.79938775035416e-10 0.000335242929730148 2.093860284329e-08 9.47974817024469e-15 0.000115185343876935 0.000372045997749066 4.99345466416339e-05 0.000380753689833182 1.32133610082747e-11 0.000271376670778097 4.79979568657602e-05 3.31719462523597e-11 0.000462889102963469 0.000174794591502162 4.97234171835506e-36 0.000382260696737932 5.89825530034096e-15 6.13017192227985e-15 0.00132012590471164 1.58267524385742e-09 0.00028250964881778 2.11419670571891e-10 0.000169518641671425 5.42508110792131e-09 0.000953685556718877 3.69144438543295e-09 1.60097008978457e-08 0.000128116785821503 3.12133018574472e-12 XM_005209288.1 MUM1 PREDICTED: Bos taurus melanoma associated antigen (mutated) 1 (MUM1), transcript variant X1, mRNA. 0.0 3746 100.00 0.537684537684538 NM_032853.3 MUM1 Homo sapiens melanoma associated antigen (mutated) 1 (MUM1), 0.0 760 83.06 0.190624190624191 TCONS_00213177_2 sp|Q08DK9|MUM1_BOVIN MUM1_BOVIN PWWP domain-containing protein MUM1; 0.0 677 100.00 0.973837209302326 0 coding 1 0 1 1 -1.33161384918164 0.00330040403445891 -0.0154535611063584 0.777539312815508 GGCACATCGCGTCAGACCTTCAAGTACTTTGTTTGTGCCAAATCATTACCACTTGCCACATGAGTCTAAATCATGACGGATGCCAAGTATGTCCTTTGCAGATGGAAAAAGCGATTATGGCCCGCAAAGGTCCTGGCTGGAACTGAAAAGTCAGCCAAAAATAAGAGGAAAAAAGGATATTTTCTAAACGTTCAGATACTCTCCTTAGACAAAAAGATTAAGGTGAAGAGCGCGGAAGCCAAGGTCCTGAGAAAGGTGCACATCGAAGACATCGCCTCCTCATTAGCCTCGCAGGACGGGACTCCTGCTGCGCCCCTGGAGGAGCTGACCTACCGGCGGTCACTCCGCGTGGCTCTGGATGTCTTGAACGAAAGACAAGGGAGCTCTTCCAGGGAAGGAACGACCCCTCGGCCTCCAAGAGTGAAGCCCATGGAACCAGCCTCCTGGCCCCCCAAACCTAGCCTTTCCCCATCATTCCTTGAAGACACGGCGGGCAGTCCGGGGCCAACAAGGAGGGAACGCATGTCCCAGAGGCTGTCCGGCCTGCCAGCTGGTGAGGAGGATCTGGAGTACGGAGTGGACCACAAGGAGGGGCTCAAGAGAAGCGGAGGCCTGGATGCCCCGGCTATGTGTTCAGCCAGCGGTGGCGCTCAGGACAGGGAGGCATCCAGAAAACAGCAGGCAGACTGGATGACACCTCTCGGTAAACAAGGGAGGAACCCGGCACAGGGACCCCACTCGGGTCAGAGAGTGGCTCCATCCTCAGAGGGAGCCGGCCAGGAAGATGGTGAGACAGGGGCCGGCCCGGCAGCCCTGTGCTCGCCTCCCGGAGGCAGGGACCTGAGTCCCCTGGATGGCTGTCCCGCAGAGCACCTGGGCCTGGACAGTGGCCAGAGGCCGAGGGCTCACATGAGTCCCCACAGCCCTGCTCAGCTCGGCCCTGCAGAGGAGGCAGCAGACACCCGGCCACTGGAGGAAGCCCGACCATTGTCTGAAGAGTTTATGGAGCCGAGCGCTGTGAACTCTCTCCTGGAGGAGGACGAGGATGACGAGGAGCCCCCGAGAATCCTGCTATATCACGTATCTCAGTGTTGCTCCGACGACTGAAGCACTTTGACTGCAAAGAGAAGCAGGCGCTTTTGGACGAGGCAAAGGAGGACTTCGCCCAGGCCATCGGCTGGTGTGTCTCCCTCATCACTGACTACAGGGTCCGGCTCGGCTGTGGCTCCTTCGCCGGCTCTTTCCTGGAATACTATGCGGCTGACATAAGCTCCCCTGTCCGCAAGTCCATCCAGCAGGACGTCCAGGGGACGAGGTTCCCCCAGCTGAGTGGGGGAGATCCCGAGGAGCCTGTGGCTGGGAGCCCACAGGGCAGGAGGCCAGCCTACAGGAAGGTGCTGCCCGACCGCTCGCGGGCCGCCCGGGATCGGGCCAACCAGAAGCTGGTGGAGTACATTGTGAAGGCACGGGGCGCCGAGAGCCACCTGCGGGCCATCCTGAGGAACAGAAAGCCATCCCGGTGGCTGAAGACCTTCTTGAGCTCTGGCCAGTACATGACCTGTGTGGAGACCTACCTGGAGGACGAGGAGCAGCTGGACCTGGTGGTCAAGTACCTGCAGGGTGTGTACAAGCAGGCAGGCTGCCAGCTGCTGGCACGTGGGCACGGAGACGGCATCCGTTTCATCCTGGACGTGTTACTGCCTGAGGCCATCATCTGCGCGATCTCAGCAGTAGATGCAGTGGACTACAAGACGGCCGAGGAGAAGTACATCCGAGGACCGGCGCTGAGCTCCCGGGAAAAAGAAATATTTGATAACCAGCTCCTAGAAGAACGGAATCGGCGATGCTGAAGCAGGCGGTGGCAGTGCTCCATGCCTGCGCTCTGGGGGCCGGGCAGGCCGTTTGCCTCCTTCTGTCTGTGGGTTCTGTTTTCCTGGCTCTTGTGGAAGGTATACTTCCCAACAGAACAGGCTTTTAAAGAAAAGAAACACTTTATTTTTTATTTTATTTTTTTTTAAATTTCACATCATTACCTGTGACTGTACTGTGTAGGTTCATAGAAGGTGCACATTTGTTTTTTATGTTAAAAAGCATTGTATCTGACATTCAACAGGAGTTTTAAAGACATACGAGTGTGCTGCTCCCGGCACAGTGTGTTTTTCCATTTGTTTCTCTCTTCTGTGCGGTTCCTCTCACACTGGCTCCTGAGTTTGCTGTGCCTCTGTTCTGTGTTTTTGAGAAAACCCGGTGTTTATGAGAGGCAGCCCAGAGACCAGCTGCCGTCCGCACTCTTGCCTCTGCTGGCACTCGGGCAGGGGAGAGGCAGACCTTGAACCTCTCCAGCCACTTCCTCCTCGGTCTCTCTGTGGGTTTCTCCACCCAGCCCACTCCTGGGCCGGTGTGACAATCCCTAGTGGTCATTGCTCCCATCCAGCCTGGCCAGGGTCACTGTGCATGTGGCCTGGGCTGTGGGGTTGTGGCCTGGCACCTGCGGAAACCAGCCCTTTGTTTTAAAGCCAGAGCATGGATAGGTCCCCTGCCGCCCGAGGGTCCCAAGCTAGGGGCCCCCACTTCGGAGACAGTTGCCTGAAGGCTGGGTCCTCTGTGCGGTCACAGAAATTCTATACACCACAGATTATGTATTCTAAGCTGACGTGGAGCTGCTTGTGGAAGGAGACAGCCAGGTCCCCACTGTGATGGCTGCACCACAAAGTCTGAGCCTGGCCAGTGGGGAGAGGTTCTTGTGGGGGTTAGGGAGTTGGAGGGGTGAAGGAGTGGGCCCTGACCAGAGTGGAGTGGTCCAGGAGGAAGGAGGTATAGCCATCACTGCAGGCACCAGGAACCGGCATGTGACCTCTCTGCTGGTTTTGCATGACCCTGAGCAGAGGTGCAGCCGCTGGCCCGAGGTCCGGCTGAGCCACCCTCCAAGGAGACCCCAGGGGTGTCCTGGCTGGGCTGACGTGGAAGGACTCACCCGCTTCTGGAAGGTGCTTTGACAATGAGCCTTCTTGAAACAGGTCCGGGTGGAGAGCAGTACGCTCTTGGGGGCAGGGGACCACATGAACTATTCCATTACCGTTGGGTATTTTTATATATCTGTTCTGAGGTCTGCTTGTGGAACTGAACTGTTGAGACTGGAATTAAAGGCCGTTTTGCAGCCCTGCTTATTCTTTTCTGGGATCCGCCTGCAGCCCACCATGTACAGGCACTCAGGCAGCCACATTGTCCCCAACAACTGCTTCTGGAGGCCCTTAACCCTGCTGGGGAGGGGGTTCCCACACCAGGCCGAGTAGAGCAGGTGTCTATAGATGCACTGTGCCCTGCTGAGCAGATGTGTTGGGGGCTTCTGCCCCCCCCCGGTGTCTCAGCTCTCACTGTGTCTTGTGTTCTGTGGATTCTGAGCATGTCTGTCTTCAAGCTTTGTCCATCCACCAGGGCAGGCGGTGGTGGGTGGGACCTGCTGATGCCCCCAGGTGGTATCGGGCAGCGGTAAGGAAGCTGGAGCCAGCTGACCCAACTGGCTCACCAGGTGAGGGATGTTCAGAAGGGCCTGCCAGCTGGCCCCAGCTCCCTGGGGAAGTCAGCACACGGATTGCTTCTGAAGCATCAAGAAGACATACCCAGCACAGCACCCAGCACAGGAGTGCAGGCAGGGGCCCCCACCAGCTGGCCTGTGGCCTCCTGCATCCCTGTCCTCCAAAGCCCCAGATTCCCTGCACCCCGTCACCTGCGGTCCCCCCTCAGCCGTCCTGGGCTCCAGCCAGCTAGAAAAAGCTGCCTGCGCCTCTGCACGGCCACCTTGCTGCCCCCAGGTCTGGTCATCTCCCACGTGGTCACACTCCCAGTCTGCCCTCCCTGACC EMBV3_01251 TTCTGAAAAACACGGTGATCCTTCTCTACCGGTTTGCACCTCTCTTCCTGCTCTACGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22269 CCACGGAAACCCAACTGTTTCGAGCTGTACAACCCCAGCCACAAAGGGCAGGTCATAAAA Gene GeneID:618488|CYTH3:XM_002698150:585_cdna Constitutive 0 NULL GeneID:618488 25 GENE CYTH3 PSCD3 cytohesin 3 EMBV3_42473 GGGTCTATCACCGTCTCCTGGAACATGGAAGATTTGGGGGTACTTTCACTTGGTCATTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05948 GCAGATGGAGAAGATGCTTATGCTATGAAGCGGGATTTGTCGCAGATGGCAGATGAGCTG Gene GeneID:528769|NAA11:XM_002688379:16_cdna Constitutive 0 NULL GeneID:528769 6 GENE NAA11 ARD1B N(alpha)-acetyltransferase 11, NatA catalytic subunit EMBV3_42719 TCAATGAGCTGGCCATTTTCACAGCAGGAGTGGCCGACATCATCCTCCCACTAGTATGCA Gene GeneID:509891|LOC509891:XM_002691557:5_cdna Constitutive 0 NULL GeneID:509891 11 GENE LOC509891 NULL similar to Olfactory receptor 1J4 (Olfactory receptor OR9-21) (HTPCRX01) EMBV3_00254 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19021 TGGCAGGAGGTAACCTAGAGAAAGTGCTTCTGGGATATGGAAGGGGCTGCTTTTGGTGAT Gene GeneID:505650|BCDIN3D:NM_001075216:32_cdna Constitutive 0 NULL GeneID:505650 5 GENE BCDIN3D NULL BCDIN3 domain containing EMBV3_28896 AGAAGCCTGGGATCTGTAAGATGCTTCGTGTCCTGGCCTTTGCTTTTCCCTATACCTGGG Gene GeneID:527461|PAQR5:XM_002690486:426_cdna Constitutive 1 NULL GeneID:527461 10 GENE PAQR5 NULL progestin and adipoQ receptor family member V EMBV3_03775 TTTTAGGGACTGGTATTGGGTTTGGTTAATATATGGCTTGGTGGGGATGGGACCGTGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27669 CATGTCTCAGGGCAATTAAGCCCGCATGCCACAAGGAGAATCCCAAGTGCTGCAAGTAGA Gene BVV0102_099986 + 0 NULL GK000025.2:21108141-21267907 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29107 ATCACGACCCTTAACCCAGTCCCAGGTCTTCCAAACGGACACCAGGTCCTGGGCTGCACA Gene BVT0102_205258 - 1 EMBV3_34585 GK000017.2:71572740-71575828 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00076237 TCONS_00078159 TCONS_00076234 TCONS_00076235 TCONS_00076236 TCONS_00076238 2 XLOC_046759 XLOC_047236 Coding TCONS_00078159 XLOC_047236 NonCoding NonCoding SEC14L2 17:71562226-71574217 x TSS58227 1578 2 TCONS_00078159_2 49 3 0.868640533778148 0.00277519255404532 0.000433502630581778 0.000607817275621495 4.04139322404576e-05 4.89575259710792e-05 5.60155480122032e-06 7.27309652053491e-11 5.49120496075569e-39 0.000145058967164819 0 0 6.7894321220384e-06 2.43114958428052e-57 2.90331980873066e-226 1.41652147144733e-05 6.86287874996555e-05 0 0 0.000154988669294697 6.81885489281546e-05 1.39441869280921e-05 0 0 5.31197839407396e-05 0.00105664436071141 0.000646566847179344 0.000188543857167956 1.21738731990899e-05 0 0 XR_228348.1 LOC101904849 PREDICTED: Bos taurus uncharacterized LOC101904849 (LOC101904849), 0.0 1667 100.00 0.584917617237009 XM_005261425.1 SEC14L2 PREDICTED: Homo sapiens SEC14-like 2 (S. cerevisiae) (SEC14L2), 4e-33 147 68.08 0.305449936628644 0 noncoding 0 0 0 0 0.0724949508644183 0.647062009434392 -0.010120694766725 0.832988386819359 CGGAAGACAGCCCACCGGCCGGACCAATCTGGGGACGAGCTGGCCGTGGGGGGCGCGCACACGAGTGTAGCAGGTGGCTCTGCGCGTGCGCCCCGCTTATTGGCGGGTAGACGCTAGAGTCCTGAGGCGGAAGTTTGCCTGAGTGAGGAAGTGTGAGGAGCGAGACAGAGGGCGCAGACTTACGCGCTCTGCGCGCCGAACGTCCTTTATTCATTGGCTACTTTTCCTAACAGAGCGTTGTAAACAAAGGTCGGGATGTCCTCCTGAGGGGTCTGGCTGGGGCCTGTGCGGCCTCGGGCCTCCTGTCGGCGCCAGCCTCCCCGCTACTCCCGCTCCCTCAGCTAGGCCAGACCATCTCCCCAGGCTGGGCCAGGGCCTGGGTTTCTGAGCGGAAGGAATGCCCCAGGCAGCGAGGGCCGGGCCCCGGCGCTGTGCAGCCCAGGACCTGGTGTCCGTTTGGAAGACCTGGGACTGGGTTAAGGGTCGTGATCGCCCGCAGGGCCTGTGACCTGCAGCCCCTGGTCGCCGAGCCGCCACTCCTAACCGCCCGCTACCCACCGTGGGCATCCCTGCCTGTCGCCGTGGGCGGAGGGGGTGGGGGCCCGCGAGGCTATCTGTGGCTGCCCTGAGCCCCTGCCGTGGAAGCCTCCCCAGCAGGCACCAAGAACCCGCGGCACCCACCATGTGCCTCCCAGAGACGGGACTGCTAAGGCCTCGCTCAGATTCCTAAACGAGTGTCAGCCAGAGGACAGTGTCTTGATCCTGGGAACCTCTCCGTGCTGACTACAGACACCAGACACAGGCAGCAGCTCCGAGTCACAGGGTACCTGCAGCATCCTGTGTGGCCGGTGCGGCCTGGAAACTCACGAGCACAGTCCGGGGGCTCCCAGCCGCAGGGATCTAAAGACCTGCGACTAAGCGACTCCAGGGCCCTGTGCCCGGCCTCGGGGTGCCCGGTCTCGGGGTGCTTCCATCTGTGCTAAGCTGCAGCCCGGGGCGAATTTCTGCCTCCTCTCTCTTGAAGATCTGTGCCTTCCCAGCCCAAGGCGGGTTCGGCTGAAAGGGTTTCAGGTGTGGGTGGTAACATACTGAACCTCCTCCACAGCCGCTGCCAGGAACCAGAGCTGGGCTCACGCACGTGGTGGGCGGCAGCCACAGAAGAGCCAAAACTCATCAAGAGCCTTTCGCTCAGACTTTTTCTTCCCCCAGCTCAGCTGGAGGGTTGGAATCCGGCCAGGAGCATTCTTCCCATCTTACAGACAGGAACTGAGGCAATAAGGACAGCACTCGTTGCGCCAGAGCCAGCACCAACAGCCAGAGGTCCTGTGCCCTCCAGACTGCTCCGCGCCACACCCAGGCCTCAGCACGTGTTTGCAAAACCTCTGCGTTCAATGTGGTGCCTGAAGAGTGTTACAGGAAGAGTTCTCACGAAAACAAAGAGGAAGAAGCCCCTTGCTGGGGCCCAGCCTGCTTCCGGGGTGCCACTGCGCCCCAACCAGAAGAGGGAGCCTTGGCCCTGGCGGCTCGGGCCTTCCCTATGACGCCATTCCCCGTGGGAGTGCTGCCACGCAGCCATGG TCONS_00076234 TCONS_00076233 TCONS_00076235 TCONS_00076236 TCONS_00076237 TCONS_00076238 r 3' 24 TCONS_00076238 r 5' 0 EMBV3_32852 CTGATGATTCTCAAATGAAAAAGAGCCCTTCGATGCCTTTTCTCGGGGAGCCTCTAATGG Gene GeneID:768020|C3H1orf185:NM_001077079:121_cdna Constitutive 0 NULL GeneID:768020 3 GENE C3H1orf185 C1orf185 MGC137016 chromosome 1 open reading frame 185 ortholog EMBV3_14588 CCTTTCCTCTCAGAGCCTGAATTGTTCCCCTAACAGAGAGGACACAGTAGCAGATCCTGT Gene GeneID:512668|ZSCAN29:XM_002696806:561_cdna Constitutive 0 NULL GeneID:512668 21 GENE ZSCAN29 NULL zinc finger and SCAN domain containing 29 EMBV3_30062 GAAAGCGTGAACGACAGTTCGTAACCTTTGTTTTGTTGAGCATCATTTGTCTTTGTTGTT Gene GeneID:616545|SKAP2:NM_001038214:22_cdna Constitutive 2 NULL GeneID:616545 4 GENE SKAP2 MGC128629 SCAP2 src kinase associated phosphoprotein 2 EMBV3_38744 TATGAGGTCACGTCCACCAAATACACCCGGGATATCTACAAAGAGCTCCTCATCTCCCTG Gene GeneID:767958|C29H11orf10:XM_002699284:213_cdna Constitutive 0 NULL GeneID:767958 29 GENE C29H11orf10 C11orf10 MGC133501 chromosome 11 open reading frame 10 ortholog EMBV3_02812 CTTGCGCCAGCTTCTCCAGCCCCTCAAGCACAAATGGGGAAAAGTCAGCTAGGATTATTG Gene BVV0102_249878 + 0 NULL GK000006.2:14250539-14280382 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202513 TCONS_00202512 1 XLOC_123993 NonCoding TCONS_00202512 XLOC_123993 NonCoding NonCoding LOC100847113 6:14253008-14256546 x TSS151959 418 1 TCONS_00202512_1 79 3 0.882668928470455 0.00051923671965673 0.00225958293707839 2.21387670425307e-05 4.14955445153496e-05 9.19197484712548e-12 0 1.74334041154686e-10 0 0.00020763511693643 0 0 0 0 0 0 0 0 0 0.000168844786278723 3.43937051732017e-05 1.911955583994e-11 0 0 0 9.94517049218255e-05 1.52732414705578e-10 4.71942200778789e-10 0 0 0 XM_005198572.1 LOC101906523 PREDICTED: Bos taurus uncharacterized LOC101906523 (LOC101906523), 2e-112 408 100.00 0.538277511961722 0 noncoding 0 0 0 0 -0.606514857683325 0.0106516665827122 -0.0411831395820847 0.4356073389074 GGAGAGGCATGGATCGAGAGAGGGTTCAATAGTCATAGTTTTGATGAATGGTAATACAGCTAATGACTTAACCTGTGACCCAGTTGAATCTAGCAGTCACCTCTGCACAGCTACTCCAGGGCCAGAGTCTCGTTCAGCCAGAGTTTTGCAGGTCCTCTTACACATCAGAAGCACCTCATATATGGGTCGCGGGAGGAGGGGAGGCGATGCGAGTGTTCCTGTTTGCGTTCGCTTGCGCCAGCTTCTCCAGCCCCTCAAGCACAAATGGGGAAAAGTCAGCTAGGATTATTGACTAGAAACACTACGTTAGAAGCCGGGGCTGCCCCAGCAACTGGACAGGTGCCAGCTCTGATCTCCAGGCTGGGACCTGCAGGCATACTTGGAGACATTAAACCATGAAGCAAAGAACCAAAACCTT TCONS_00204477 r 5' 0 TCONS_00204477 r 3' 668 EMBV3_11733 TGCACATGAAGGACAGCTGCACGGGGGTGATTTCCAGACACAACCAAGAGTCTAACGGAA Gene GeneID:518157|DBNDD1:NM_001099005:261_cdna Constitutive 0 NULL GeneID:518157 18 GENE DBNDD1 MGC166260 dysbindin (dystrobrevin binding protein 1) domain containing 1 EMBV3_19094 GGTCACCTACCTGAAGGACAACAGCACTCGCAACATCTTCGTCTACCACGAGGACGGGAA Gene GeneID:282176|ADAP1:NM_174513:53_cdna Constitutive 0 NULL GeneID:282176 25 GENE ADAP1 CENTA1 ArfGAP with dual PH domains 1 EMBV3_26883 GCCGTGAAGTGAGAGAAGATGCGCGAAGGAGGTGGACCAATAAGGAAAATGTAAAGCACC Gene GeneID:533484|DHX40:NM_001076897:33_cdna UTR3_Alt 3 NULL GeneID:533484 19 GENE DHX40 MGC142364 DEAH (Asp-Glu-Ala-His) box polypeptide 40 EMBV3_41952 TCATTTCCCAGGACTCATGTGGGCGCTTTGAACCTCAGACTTTCCCACCCCAGAACCAGA Gene GeneID:514886|STK4:NM_001015602:1078_cdna Constitutive 0 NULL GeneID:514886 13 GENE STK4 NULL serine/threonine kinase 4 EMBV3_34167 CCTAACATATGCAGGTCTGTGGAAACACTGTGGAATAAGCCCAGGAAGGATGGATAGTGT Gene GeneID:514967|KCTD20:NM_001101093:32_cdna UTR3_Alt 2 NULL GeneID:514967 23 GENE KCTD20 NULL potassium channel tetramerisation domain containing 20 EMBV3_01001 GGAAATAAACCACCGTGAGAATCAGCAGAAACAATAAGCAATGGACTTGGCCCTCAGGGG Gene BVV0102_441945 + 1 EMBV3_00150 GK000003.2:18900668-18938122 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33059 CAGATTATAAATAACGTGGGGAAGAGAGAGTCTGGGGATTGGGCCCTAGCTCATCTGACC Gene BVV0102_402187 + 1 EMBV3_07273 GK000015.2:46344823-46368629 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11252 GTTAGATGCTGCGAAAATCAAACTACCTAGACTGCCTCACGGATCCTATACGCCCACAGG Gene GeneID:517059|SGCD:XM_002689331:10_cdna Constitutive 0 NULL GeneID:517059 7 GENE SGCD NULL sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) EMBV3_12611 CTGCAGTTAAGAGTGTACTCACTGGCTGAACTCCTGAACATCCTAAAAACTCATCTCAGC Gene GeneID:513608|ARG1:NM_001046154:4_cdna UTR3_Alt 3 NULL GeneID:513608 9 GENE ARG1 MGC128755 arginase, liver EMBV3_05993 TCTCTGGTGCAGGAAAAATGTTCAGTTCAGGAGTGGATCTCATCACTGCCTGTGACATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32036 TCGACAGAACAATCCTGAATCCAGAAACCTGACATGAAGGAAGAGGAGGCTGTGCGCAGA Gene GeneID:281572|VEGFA:NM_174216:201_cdna Constitutive 1 NULL GeneID:281572 23 GENE VEGFA VEGF vascular endothelial growth factor A EMBV3_24845 CAACAGAAAATGGTGTCGGAACAGTGGGAATCAGCAATTTTGCACAGGAAGCTTTGGGAG Gene GeneID:100138886|GCSH:XM_002688105:188_cdna Constitutive 0 NULL GeneID:100138886 6 GENE GCSH NULL glycine cleavage system protein H (aminomethyl carrier) EMBV3_42767 GGCATGAGCTCTGGCAGGAGTGGGCTCTGAGCAGGTGTTATATTCATTCTTTACAAACCG Gene GeneID:281294|MAP2:XM_002685550:158_cdna Constitutive 2 NULL GeneID:281294 2 GENE MAP2 NULL microtubule-associated protein 2 EMBV3_12383 GTTGAACCATATGAAAGTGCCATTTTATAGCTTATAAAAAGACTGAATGTTAGCAGTTCT Gene BVT0102_223940 - 1 EMBV3_01043 GK000012.2:75500072-75664651 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33823 CACAGTGAGGGCCGTAGAATCCATCAGGACATTCGCAGACCCGTCTTTCATTACAAAAGC Gene BVV0102_363640 + 1 EMBV3_17743 GK000005.2:48952373-49178874 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191783 TCONS_00191781 TCONS_00191780 1 XLOC_117019 Coding TCONS_00191780 XLOC_117019 Coding Coding WIF1 5:48913746-49009466 j TSS143658 4880 1 TCONS_00191780_14 317 0.14733606557377 10 0.949121908920904 0.00231471265473871 0.00180779545716023 0.0023242366002985 0.00120648945878759 0.0013587069631893 0.000565555603134715 0.000877298306369691 0.00120243737589292 0.0010889775419592 2.54732595603936e-11 7.788715011694e-21 1.57253889060906e-39 1.93066818136311e-16 1.08884486501277e-90 0.0006421510537062 0 0 5.68748576164313e-13 0.00160854842062815 0.00240092647417078 0.000291108318404188 3.78794166048764e-13 0 6.85983586461761e-13 0.00154238588950413 0.00160685173699581 0.00179248924820831 2.91396990270719e-13 1.16850077013528e-17 2.90969628289183e-13 XM_005206638.1 WIF1 PREDICTED: Bos taurus WNT inhibitory factor 1 (WIF1), transcript 0.0 3097 100.00 0.351639344262295 NM_007191.4 WIF1 Homo sapiens WNT inhibitory factor 1 (WIF1), mRNA. 0.0 2239 88.84 0.352459016393443 TCONS_00191780_14 sp|Q9Y5W5|WIF1_HUMAN WIF1_HUMAN Wnt inhibitory factor 1; 0.0 632 94.64 0.996845425867508 0 coding 1 0 0 0 -0.545297750238681 0.0344727077317587 0.000771751391461933 0.988258631167515 AATGCGTACACGAGTGAACACATACATGAAGCTGCCCACAAATGTAATTGACGAGAGTGAGTTACACAAGGAAAGCAAGGATAGCGGACTAGAAAATACATGGTAGAGTTTTCAAACTAAATGAAGTTGACTTGTAATACCTCCTAGCACATTACTTCCAGAATTTTATCATGTGCCAATAAATATTGTTACATTACATTTTTATTTGAGCAGAGAAATCTTAAAATATGACTTTTTTTCTGAGTGAAAAAGCCTCCGTGCTCTTTAACATCAGAAGAAAATCCAGCCTGATTCAATCTTAGATGGACCTTCTTCCCCCAAAATACACCCTCTTACTCTTGAAAAATAGCTGACTAGCGTATAACATCTGCTCCTTCCTCCCCTTCAAAAACCAAAAGAAAGCAAATCCAGTATTTTTAAATAACACTTTTCTCTACCATAAAATGTAATTTCTCCAAGTGTCCACTGCTGGGGAGAAGTAAACAGAGAAAAAAATTCCTTACAGCTGTATATATCACCAGTATCACCAGTACCAGAATCAACTGTTGCACAAGAACCTCCCTCAGAAGAAGTTGAGTTAGGAGGGAATTTAGTGCCTCTTTTTCTCTACCAAAAAGTAAATTTTTTGAAGGATATTTACCAATTACTATTTGATTAGAACAGCCTGTAGAGGGCGTCCTTACATTAAGAGCTAGAGGGGTTAGAGCACTATTGAGGGAAAAAAATACTTTCAACTAAAACTGCACCTTTCTGGAGTAAAGAAAATGTCTACTGTGTTGTGAAATTATTATCTTTGGGGAACAATCGGCATTACAATGCTAAAGTGCTTTAAGTATTGCTGAATGTATATGAATGCATTACATAAATGAATATTCACTGAAATAAAAAAACAGTGAAATCTTTGAATAGATGTGAATTTTATTGTAAAGGTAGAACAGCTGTGAAGGTTTGGTTGCAAACAGACTTAATCATGATTTACTTGTCAGTGTGAGGTATAGTGGTTAAGAGAATAGGCTTTGAAATCAGAGTGACTGGGATTTGAACCCTGACTCTACCACTGACCAGGTAAGTAACCATAGTTAGCACTGGGTAACCACAGTCAGCTAACTTACTGGACCTTTATGAGCCTGGTTTCTCCATCAGTAACGTGGGAATAATAATATCACCTACCTATTTAAAAGTGTTGTGAGAAGTAAGCTCTTAAAGTACTTTTACAATTAAGAAGTTCAAATCCATTGGAGATTTCTTGTTGTTAGGGAAATTAAAATGGAGGAAGTCTTGTTTTGGCTTCAGAAGCAGGAGAGCAGGTTCTGACCTGCTTCTGACTGGCCTGGACACTGCCTAGATTCTGTGCCTATCTGCAAACACAAGTCAGGCAGCACTGTAGATTAAAAAAAAGGAGGTGGGTCTGGAATTCTTGAGCTCCTGAGGGTCTGGCCAGCATCCCCACACCCCAACCCCAGATCTAACAAAATCCTATGACTCACAAGATAAACAGCATTGTAAAAGTTTAAAAAAGAACCAGGGCTGCACTTTTGTGTGCAAATTGATGATATGTTTGTAGCCCAGGATTGTAAGTGGGAGCCCTGGAAACTGTAATTTGAAGTCTCACCCATGGGGTGGACGCATTGCCCAGGACCTTTTCCCAAATGGGACTCCAGATTGCTATTAATGAGGGACTTCCTAGGGCTGTTCAAGCCTGGATGTTGGTTGGCGCAATTTGGTGATATATGTGCTTTTACTTTTCTTTATTCTTTTCAGTTCAGTTGCTCAGCCATATCCAAATCTTTGCTACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCCAGCACCAACTCCTAGAGCTTGCTCAAACTCATGTCCATTGAGTCAGTGATACCATCCAACCATCTTATCCTCTGTCTTCCCCTTCTCCTGCCTTCAATTTTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGTTCTTCGCATCAGGTGGCCAAAGTACTGGAGTTTCAACTTCAGCTTCAGTCCTTTCGGTGAATATTCAGGACTGATTTCCTTTAGGGTTGACTAGTTTGATCTCCTTGTGGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTTAAAAGCATCAATTCTTCTGTGCTCAGCTTTCTTTATGGTCCAACTCTCACATCCATACATGACTGCTGGAAAAACCATAGCTTTCACTAGAAGGATCTTTGTCTTTTCTTTTAATGACTGTATAATTGAAATGAAGGCAATTAATCCTCGATTAAATATTGAAATTGTTTATTGTGTGACCAGTGGTTTCTTTTGTTAACAAATCCTTCAAACCAGAGCCAAGAGGCTACACGCCCAGCCGTCTACGCGGGGAACTGCTCCGGCTGGGAGACAACTTAAGGGCGGCAGGTTGGGTAGGTGCGGGAGGAGTTTCAGCTGCGAGAACCACGATCCAGGAGGTCCGGAGTAGCATGGCCCGGAAAAGCGCCTTCCCTGCCGGCGCGCTCTGGCTCTGGAGCATCCTCCCGTGCCTGCTGGTGTTGCGAGCGGAGGTCGGGCAGCAGCCGGAGGAAAGCCTGTACCTGTGGATCGACGCTCACCAGGCGAGAGTGCTCATAGGTAAGATTTCGCGGGAGCTTCTACTTCTTCCCAAATGCCTGGGTCTTCACGCCCTGCAGCTCTTCTATTAAAGGAGAGATACATGCATTTAGAATGTTTTTTAAACTTAATTTCCAAGGAAGATTGTCCCCTTTTTAGTTAGTTGCGTGTTTGCTAAGCCCCTTCAGTCGTGTCGGACTCTTTGCGATCCTATGGACTATCGCTTTTCCATCTAAAAGCGTTTAAGCTTTTCTCTCCGTAAATCTAAGCTGTTCTAATGTTCTGATCATGCTGTTGTTGGTTTCTACAATCCAGCGTTTTTCAGTGGACCGAGCATGTGTTGGCACCAGTTTACTCCACAGTTCACTCCGTTTCACTGAAAGCATGTCTTTGCCATCATTCTTATCATCCACAGGAAGATTAATTGGTACTTGAAGGCAGGTGCTTTGTGAAAAGAAATGACCCATTACTAATTCTTCGGTGTTCTTTTGGCACGCAAGTTCTGATTTGGATTCTTCTAAGTTCAGCTAGTTTGATAGCTTTATTTCTTTGTGTGTGTTTTTTAAACCAGGACTTGAAGAAGATATCTTGATTGTTTCAGAGGGGAAAATGGCCCCCTTTACACATGATTTCAGAAGAGCACAGCAGAGAATGCCAGCTATTCCTGTCAATATCCATTCTATGAATTTCACCTGGCAAGCTGCAGGGCAGGCAGAATACTTCTATGAATTCCTGTCCTTGCGCTCCTTGGATAAAGGCATCATGGCAGACCCAACTGTCAATGTCCCTCTTCTGGGAACAGTGCCTCACAAGGCATCAGTTGTTCAGGTTGGTTTCCCATGTCTCGGCAAACAAGATGGAGTGGCAGCATTTGAAGTGAATGTGATTGTCATGAATTCTGAAGGCAATACCATCCTGCAGACACCTCAAAATGCCATCTTCTTTAAAACATGTCAACAAGCTGAGTGCCCAGGAGGATGCAGAAATGGAGGCTTTTGTAATGAAAGACGGGTCTGCGAATGTCCTGATGGATTCTACGGCCCTCACTGTGAAAAAGTCCTTTGCTCACCACGATGCATGAATGGCGGGCTATGTGTTACTCCCGGTTTCTGCATCTGTCCACCTGGATTCTATGGAGTCAATTGCGATAAAGCAAATTGCTCAGCCACCTGCTTTAACGGAGGGACCTGTTTCTACCCTGGAAAGTGTATTTGCCCTCCAGGACTAGAGGGAGAGCAGTGTGAAACAAGCAAATGCCCACAGCCCTGTCGAAATGGAGGTAAATGCATTGGTAAAAACAAATGCAAGTGCTCCAAAGGTTACCAAGGAGACCTCTGTTCAAAGCCTGTCTGCAAACCTGGCTGCGGCACACATGGAACCTGCCACGAACCCAACAAATGCCAGTGTCGGGAAGGCTGGCATGGGAGACACTGCAATAAAAGGTATGGAGCCAGCCTCCTGCATACCCTGAGGCCAGCAGGCGCCCAGCTCAGGCAGCACACGCCTTCAGTTAAAAAGGCCGAGGAGCGGCAGGACCCACCTGAATCCAATTACATCTGGTGAACTCCGACATCTGAAACATTTTAAGTTACACCAAGTTCATAGCCTTTGTTAACCTTTCATGTGTTGAATGTTCAAGTAATGTTTATTACAGTTAAGAATACTGGCCTGAATTTTATTAGCTTCATTATAAATCACTGAGCTGATATTTACTCTTCCTTTTAAGTTTTCTAAGTACAGCTGTAGCATGATGGTATAGATTTTCTTGTTTCGGTGCTTTGGGACCAACTTTATGTTATGTCAGTTGTTCAGGTTAAATTTTTGTCTTTTCAGTGTGTACTTGGCAGATAATTTCCAAAAGTACAATGCATTCACGGTATTGAGAGGCTGGGCAACATTAGAGAAGATAAATGGAATAAAAATGCATAAATCACAAGGGTTTGGATGAAGCAGTTAAAAGTGCTGAAGTCTTCGCATTTCAATTTATTTTGTCATGTATTTAGACACTTGTTACATTTTTTGAATTCCCCTTAAACTCATAATACATTTTACCTTACCATGACCTTACCATGATTCCAGAGAATTCAGTATTAAAAAAGAGCGAGAAAGAAATAACACTGTGGTAGTGACATTTAATGATATAATATATTGTAAACACAATAAAATAGGGAATATATGTATGAACTGTTGGCATTGGCTTGAAGCAATATAATATATTGTAAACAAAACACAGCTCTTACATAAACATTTTATACTGTTTGTATAAAATAAAGATGCTGCTTTAGTTTTC EMBV3_13245 TGCACTGTCCCGTGTGTCAGGACGAGGTTTCGGAGACACAGATTAATGAGCACTTGGACT Gene GeneID:534918|C1orf124:NM_001098082:93_cdna Constitutive 0 NULL GeneID:534918 28 GENE C1orf124 NULL zinc finger RAD18 domain-containing protein C1orf124 homolog EMBV3_35107 ACCTTCACCAGGTGTAACGACCTCTGCGCCATCTGCCTGGATGAGTACGAGGAAGGCGAC Gene GeneID:517394|ZNRF4:XM_002688917:222_cdna Constitutive 0 NULL GeneID:517394 7 GENE ZNRF4 NULL zinc and ring finger 4 EMBV3_33799 TGCGGTGGTGGGGACAGTGAGCGGATCTCGGAGGGACTTGACTGAAAGGGGTCGAGGACT Gene BVT0102_190672 + 0 NULL GK000018.2:49375057-49380178 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090633 1 XLOC_055413 NonCoding TCONS_00090633 XLOC_055413 NonCoding NonCoding - 18:49379625-49379984 - TSS67979 359 1 0 0 0 0 0 0 0 0 0 0 0.000160453658707922 0 0 0 0 0 0 0 0 0 0 8.45606734413555e-06 0 0 0 0 0 0.000522263885015709 0 0 0.000184219826159876 XM_866405.5 PLEKHG2 PREDICTED: Bos taurus pleckstrin homology domain containing, family G (with RhoGef domain) member 2 (PLEKHG2), transcript variant X2, 0.0 648 100.00 0.997214484679666 XM_005259162.1 PLEKHG2 PREDICTED: Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 2 (PLEKHG2), transcript 1e-75 286 88.50 0.626740947075209 0 noncoding 0 0 0 0 0.0654275443863956 0.647975201217822 0.0202340572176523 0.767827221854275 CGCTGCGGTGGTGGGGACAGTGAGCGGATCTCGGAGGGACTTGACTGAAAGGGGTCGAGGACTCAGGGCCAGCGCCCCGACTCGCAGCCCTCCGTGGGGGAGGAAGCCGTCTGCAGGACCCTGGCATCCGGTCCCCCAGCCTCCTCCGCCCTCCCCTGGGACCCCGCGGCCTCCCGCCCACGGCTTTTTCCCAGCCCTGCCCCTCGCCCTCGGCTCCAACCGGAGCCCAAACGTTCCCAGGATCCCTGAGCCTCCGGCCCCAGACACACCAGACTCACAGCTTGGGCGATTCTTGTTCGCTTTACTCTTCTTTGTTTCACCCTTTCCGTTTTTTTCTGTGTTATCTCTCCTTACTCCCC TCONS_00083724 . 3' 130 TCONS_00083724 . 3' 488 EMBV3_02039 TTATGCCTTCACAATTGTTGGTAAAGTTCAACTAAAGTTGGTGATGTAGTAAACACTGTC Gene GeneID:534739|ANKRD12:XM_002697743:242_cdna Constitutive 2 NULL GeneID:534739 24 GENE ANKRD12 NULL ankyrin repeat domain 12 EMBV3_32630 CAATGAGGAGGAGAGCAAAGTCAGTGAAGGGGGATGGACAAAGGTGGAGTACCGCAAGAA Gene GeneID:519251|LOC519251:XM_002685321:177_cdna Constitutive 0 NULL GeneID:519251 2 GENE LOC519251 NULL similar to MLK-related kinase EMBV3_41956 GACAGCACCACATACTTGATCATTCCTCCCCTCTCAAGCCCATTGTAATTTTGGGAACCC Gene GeneID:100124429|ZFP30:NM_001102539:471_cdna UTR3_Alt 2 NULL GeneID:100124429 18 GENE ZFP30 MGC159771 zinc finger protein 30 homolog (mouse) EMBV3_36993 CAGGGACCATGAAAAGAAACTCGTGCTTCACCGAAGAAAAATACCTAAACATCGAAAAAC Gene GeneID:282296|PABPC1:NM_174568:9_cdna Constitutive 0 NULL GeneID:282296 14 GENE PABPC1 NULL poly(A) binding protein, cytoplasmic 1 EMBV3_15186 ATTATTTCCTGGAGAACATCACTCCTGACCCAGGTTTGCGCTACATCACCACCAGCGCCA Gene GeneID:281866|IMPG1:NM_174362:2_cdna Constitutive 0 NULL GeneID:281866 9 GENE IMPG1 NULL interphotoreceptor matrix proteoglycan 1 EMBV3_29041 AAGGCCATGAGTATCGTGAACTTGTTCGTGAACGATCTGTTTGAGCGGCTGGCCGGTAAG Gene GeneID:615183|LOC615183:XM_002684604:62_cdna Constitutive 0 NULL GeneID:615183 1 GENE LOC615183 NULL similar to histone H2B.3 EMBV3_34170 CACCTGGACAAGGGGGCAACATCTGGCCTGGGTTTCTGGCACCCGCATGTGAAATGACAG Gene BVT0101_068693 + 0 NULL GK000006.2:48007388-48314920 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205105 1 XLOC_124584 NonCoding TCONS_00205105 XLOC_124584 NonCoding NonCoding - 6:48065243-48066151 - TSS153251 577 1 TCONS_00205105_1 37 0.180242634315425 2 0.366041896361632 0 0 0 0 0 0 0 1.02508150973345e-05 0 0 0 0 0 0 0 0 0 0 0 0 0.000657653257256829 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0288032972330281 0.842184941736723 -0.0051983053219129 0.921251224312949 GGTGTGTGGTGCCCTGGGCTCTGCTATGTGAGCACAAACCCACCCCCAACCCCACACATCCTTCACAAATAGCAGCAATTCAATTCCCCTGCACCCACAGAGGTGGCCTTCCTGGAGAAGCCTGGAAAGGGAAGAGATTTTGTGTCCAGGTCAGAGTGGGGAATGTGAAGAGCCTGACCACCTGGACAAGGGGGCAACATCTGGCCTGGGTTTCTGGCACCCGCATGTGAAATGACAGCCCACTCCAGGCCTTAGGTCACACCTGCGGGGAGCCCAGCAGGGCCCCAGTGCTGGTGTCCCAAGCTGAGGACTGCTGGCCTTCCCTCTCTGCTCCTTAAGGCGACAAGCTGAAGTTCTAATAACAATTCCATCTGACCACAGACTCGCCTGCTGTATTTACCACTGCAGCCCTCGCATGAAGCACAGCGTGGGTCCCACAGCAGCTGCTCAATAAATACCTGTTGAATGTGTTGGATCTATAATCAAAGGCATAAGGCTCTGGGAAAACCACTCACAGCCAGTTCAGTCCAGATGCGTCCTCTCCCTTCCTCAGTCCCAGGCCCTCCCACTGCTCCCC TCONS_00203149 TCONS_00203150 TCONS_00203151 TCONS_00203152 TCONS_00203153 TCONS_00203154 TCONS_00203155 TCONS_00203156 TCONS_00203157 TCONS_00203159 TCONS_00203160 TCONS_00203161 TCONS_00203162 TCONS_00203163 r 3' 56217 TCONS_00203149 TCONS_00203150 TCONS_00203151 TCONS_00203152 TCONS_00203153 TCONS_00203154 TCONS_00203155 TCONS_00203156 TCONS_00203157 TCONS_00203159 TCONS_00203160 TCONS_00203161 TCONS_00203162 TCONS_00203163 r 3' 56419 EMBV3_32609 CGCGCCCGGCGCCTGGCGCTGACCTGCACGATTTCTGCGCAGTATCCAGTTGTGGACCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08819 CAGCCTTCCTCTGCTATCCAGTCCCTATCTATTTCATCACACAACTCCCCTTTTGTGGCC Gene GeneID:615767|LOC615767:XM_002690668:241_cdna Constitutive 0 NULL GeneID:615767 10 GENE LOC615767 NULL similar to olfactory receptor MOR106-11 EMBV3_28688 TGAAGCTCAGGGCTGTGTTCCTTTGTTGCTGGAGAATTTGCTTGGTATGTCTTGCCCTGG Gene BVV0102_342282 + 0 NULL GK000030.2:81167689-81297833 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253025 TCONS_00063037 TCONS_00152753 TCONS_00230737 TCONS_00207277 TCONS_00218448 TCONS_00152743 TCONS_00210177 TCONS_00117964 TCONS_00186108 TCONS_00232348 TCONS_00110373 TCONS_00252934 TCONS_00109859 TCONS_00251760 TCONS_00124583 TCONS_00009883 TCONS_00199544 TCONS_00218891 TCONS_00175545 TCONS_00040583 TCONS_00011804 TCONS_00161191 TCONS_00208127 TCONS_00021596 TCONS_00251524 TCONS_00234064 TCONS_00011198 TCONS_00066192 TCONS_00189806 TCONS_00089951 TCONS_00206861 TCONS_00152647 TCONS_00130259 TCONS_00007555 TCONS_00062743 TCONS_00218881 TCONS_00063180 TCONS_00030202 TCONS_00111546 TCONS_00153219 TCONS_00185807 TCONS_00080733 TCONS_00252056 TCONS_00007501 TCONS_00124845 TCONS_00176254 TCONS_00107446 TCONS_00199062 TCONS_00209870 TCONS_00006827 TCONS_00047865 TCONS_00022065 TCONS_00142489 TCONS_00218865 TCONS_00197184 TCONS_00249012 TCONS_00117619 TCONS_00031911 TCONS_00119942 TCONS_00071185 TCONS_00066285 TCONS_00222115 TCONS_00129415 TCONS_00040860 TCONS_00233344 TCONS_00188225 TCONS_00221977 TCONS_00250938 TCONS_00251546 TCONS_00010780 TCONS_00046756 TCONS_00223365 TCONS_00249570 TCONS_00209529 TCONS_00218178 TCONS_00010588 TCONS_00222010 TCONS_00156845 TCONS_00117592 TCONS_00007432 TCONS_00251705 TCONS_00115687 TCONS_00109028 TCONS_00030297 TCONS_00165813 TCONS_00209829 TCONS_00161792 TCONS_00153777 TCONS_00007360 TCONS_00023615 TCONS_00252354 TCONS_00148453 TCONS_00135547 TCONS_00009945 TCONS_00251930 TCONS_00073576 TCONS_00040195 TCONS_00218856 TCONS_00123618 TCONS_00238420 TCONS_00039853 TCONS_00030295 TCONS_00187688 TCONS_00251846 TCONS_00177280 TCONS_00091651 TCONS_00148279 TCONS_00110387 TCONS_00231613 TCONS_00187057 TCONS_00229751 TCONS_00039908 TCONS_00245928 TCONS_00080765 TCONS_00070957 TCONS_00088087 TCONS_00056728 TCONS_00110644 TCONS_00206426 TCONS_00037933 TCONS_00006026 TCONS_00231487 TCONS_00249137 TCONS_00251627 TCONS_00179810 TCONS_00066279 TCONS_00219970 TCONS_00116955 TCONS_00007719 TCONS_00056819 TCONS_00238326 TCONS_00038667 TCONS_00019198 TCONS_00156732 TCONS_00040745 TCONS_00040178 TCONS_00201770 TCONS_00107582 TCONS_00185942 TCONS_00056147 TCONS_00088288 TCONS_00239418 TCONS_00190322 TCONS_00116101 TCONS_00010472 TCONS_00070840 TCONS_00071861 TCONS_00030941 TCONS_00123170 TCONS_00176255 TCONS_00124110 TCONS_00040698 152 XLOC_155966 XLOC_037764 XLOC_092518 XLOC_140227 XLOC_125795 XLOC_131768 XLOC_092508 XLOC_128687 XLOC_072130 XLOC_112161 XLOC_141833 XLOC_066277 XLOC_155875 XLOC_065763 XLOC_154701 XLOC_076127 XLOC_005436 XLOC_121197 XLOC_132210 XLOC_105326 XLOC_024399 XLOC_007354 XLOC_098083 XLOC_126640 XLOC_012269 XLOC_154465 XLOC_143543 XLOC_006749 XLOC_040909 XLOC_115843 XLOC_054732 XLOC_125381 XLOC_092412 XLOC_078970 XLOC_003116 XLOC_037470 XLOC_132200 XLOC_037907 XLOC_016457 XLOC_067446 XLOC_092984 XLOC_111860 XLOC_049617 XLOC_154997 XLOC_003062 XLOC_076388 XLOC_106033 XLOC_063356 XLOC_120715 XLOC_128381 XLOC_002389 XLOC_027997 XLOC_012736 XLOC_086914 XLOC_132184 XLOC_118846 XLOC_151955 XLOC_071785 XLOC_018156 XLOC_073015 XLOC_042957 XLOC_040999 XLOC_135424 XLOC_078128 XLOC_024674 XLOC_142826 XLOC_114268 XLOC_135286 XLOC_153881 XLOC_154487 XLOC_006331 XLOC_026895 XLOC_136665 XLOC_152513 XLOC_128040 XLOC_131641 XLOC_006139 XLOC_135319 XLOC_095305 XLOC_071758 XLOC_002993 XLOC_154646 XLOC_069856 XLOC_064933 XLOC_016551 XLOC_100653 XLOC_128340 XLOC_098677 XLOC_093539 XLOC_002921 XLOC_014282 XLOC_155295 XLOC_090333 XLOC_081770 XLOC_005497 XLOC_154871 XLOC_045340 XLOC_024012 XLOC_132175 XLOC_075170 XLOC_145087 XLOC_023670 XLOC_016549 XLOC_113733 XLOC_154787 XLOC_107054 XLOC_056424 XLOC_090161 XLOC_066291 XLOC_141101 XLOC_113105 XLOC_139245 XLOC_023725 XLOC_150855 XLOC_049649 XLOC_042734 XLOC_052874 XLOC_034531 XLOC_066546 XLOC_124948 XLOC_021762 XLOC_001589 XLOC_140976 XLOC_152080 XLOC_154568 XLOC_109580 XLOC_040993 XLOC_133287 XLOC_071121 XLOC_003279 XLOC_034622 XLOC_144993 XLOC_022490 XLOC_009878 XLOC_095192 XLOC_024559 XLOC_023995 XLOC_123415 XLOC_063492 XLOC_111995 XLOC_033950 XLOC_053075 XLOC_146084 XLOC_116357 XLOC_070270 XLOC_006023 XLOC_042617 XLOC_043631 XLOC_017192 XLOC_074724 XLOC_075662 XLOC_024514 Coding TCONS_00223365 XLOC_136665 NonCoding NonCoding - 7:99197616-99198194 - TSS167363 578 1 TCONS_00223365_1 46 0.998269896193772 1 0 0.000120648814424882 6.20409940898881e-05 5.51405551987913e-05 7.67844353482926e-05 2.53681650352793e-05 0.000349004910194905 6.67386467464298e-05 9.48956839952509e-05 0.000136259884344415 0.000309839721293351 0.000106745086248943 9.34329214631254e-05 5.07325207223975e-05 7.83485220371222e-05 0.000264162962598948 0.00439530801700214 0.00120968757694069 0.0042704637380745 3.04795312933588e-05 4.11579086485804e-05 7.71600047162288e-06 0.00131452670583257 0.00344702967144713 0.00588780578812554 6.32849547407575e-05 8.55096297502652e-05 7.47435494178299e-05 0.000452121394965465 0.000429115516678603 0.00059472107130323 XM_001250798.4 LOC617406 PREDICTED: Bos taurus serpin peptidase inhibitor, clade B (ovalbumin), member 6-like (LOC617406), transcript variant 2, mRNA. 2e-13 80.6 94.23 0.0882352941176471 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 ACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCCAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATGGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATTGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTAATGGACAGGAGCTCATCAAATGCCTCCATACCGACACTGAAACCAAGCACCACACAAGGGCCAATAAGTTCCAGGGCAAGACATACCAAGCAAATTCTCCAGCAACAAAGGAACACAGCCCTGAGCTTCAAGATACAG TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 TCONS_00218175 TCONS_00218176 TCONS_00218177 . 5' 162361 EMBV3_17821 ACTGAATTCTCAGGCCTCATATGGTGTCTTGCCCTTGGACTCTCCTCTGCATTTGGGCCA Gene GeneID:617338|LOC617338:XM_002685217:96_cdna Constitutive 0 NULL GeneID:617338 2 GENE LOC617338 NULL similar to FLJ16008 protein EMBV3_11563 TGCACAGACCTGGAAATCCCCCTCTTCTTCTGTGAAGTTGTTCAGGTCATCAAACTTGCA Gene GeneID:528224|LOC528224:XM_002688797:199_cdna Constitutive 0 NULL GeneID:528224 7 GENE LOC528224 NULL similar to olfactory receptor, family 7, subfamily G, member 2 EMBV3_19582 GGAATTGGGTTTACATGAGTGTCCCTTGCCTCTGTCTCCTCTTGGTTCAATAGCCACAAG Gene GeneID:521932|LOC521932:XR_083588:5_cdna Constitutive 0 NULL GeneID:521932 1 PSEUDO LOC521932 NULL similar to centrosomal protein 63 EMBV3_20314 GACTGATCCGTAGTAGTGCCAAGGGCTTCAACATTCCTTCCCTGCCAAGGCCACTTCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41111 CCTTGCTGTCCCCCTTTGTCCCACTTCTTTGATAACCCCAGCCCTACAAAAATGTACCTA Gene GeneID:539793|PPFIA4:XM_002693849:12_cdna Constitutive 0 NULL GeneID:539793 16 GENE PPFIA4 NULL protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 EMBV3_19666 CAGCTTCACATTCACTCTCCCGTTCTGCAGCTCCAACCACATCGACCACTTCTTCTGTGA Gene GeneID:782255|LOC782255:XM_002686605:100_cdna Constitutive 0 NULL GeneID:782255 3 GENE LOC782255 NULL similar to olfactory receptor Olr1347 EMBV3_27356 TCCATGAACGCCTCAAAGACATGGGCCTAACTGCCCTGAGTAGTGAAAAGAAAGCCTGTC Gene GeneID:522334|TCP11:XM_002699832:2_cdna Constitutive 0 NULL GeneID:522334 X GENE TCP11 NULL t-complex 11 homolog (mouse) EMBV3_09443 TATGATCTTAGGTTTCCCTGGTGGCTCAGTGGTTAAGTATCTGCCTGCCAATGCAGGGGA Gene BVV0102_390483 + 1 EMBV3_26882 GK000002.2:126015377-126030986 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14512 GGACTGCCATAATGTGTCTGTGTTCCTGGCTCCTAGTGTGCTCCCATTGCTGGAGGACAA Gene GeneID:530342|LOC530342:XM_002697904:513_cdna Constitutive 0 NULL GeneID:530342 25 GENE LOC530342 NULL similar to Chromosome 16 open reading frame 24 EMBV3_12700 GTGTCATCATCTACCAAGAGAAGCAGGGCGAGGAAGAGGACGCGGAGATCATTGTCAAGA Gene GeneID:512824|PUF60:NM_001046133:74_cdna Constitutive 2 NULL GeneID:512824 14 GENE PUF60 MGC128460 poly-U binding splicing factor 60KDa EMBV3_27163 GAAGCGTTGGCGCAATGGAGGGACTGGAAGTATAAGCCGCCTGCACTTAAGAAGTTTAAT Variant GeneID:100337279|LOC100337279:XM_002692738:221_cdna 97^578 1 EMBV3_20085 GeneID:100337279 14 GENE LOC100337279 NULL hypothetical protein LOC100337279 EMBV3_38485 TCGAGCTGAAGTACCCCTCTGTCCGTAAGACAAGGACGATTGCGATTCTCCCGGCACCAA Gene GeneID:100337307|LOC100337307:XM_002695938:357_cdna Constitutive 0 NULL GeneID:100337307 19 GENE LOC100337307 NULL neurexophilin 3-like EMBV3_36106 CATGGGCTACTCACACTCCTTGGTGATTGCAAGAGACGAAAGTGAGGCGGAGAAGGAGAA Gene GeneID:509120|RCC2:NM_001101911:105_cdna Constitutive 0 NULL GeneID:509120 2 GENE RCC2 MGC159589 regulator of chromosome condensation 2 EMBV3_10818 GACTCCGAATAGCCAAAGCAGTCTTTGGAAAGAAGAATGGAGCTGGAGGAATCAACCTTC Gene BVT0102_385509 + 1 EMBV3_27467 GK000018.2:58335931-58376496 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00197294 TCONS_00227432 TCONS_00035007 TCONS_00152680 TCONS_00131601 TCONS_00252174 TCONS_00035013 TCONS_00035014 6 XLOC_118956 XLOC_138244 XLOC_020806 XLOC_092445 XLOC_080306 XLOC_155115 Coding TCONS_00035013 XLOC_020806 Coding Coding ZAR1L 12:28692571-28708818 j TSS25730 4513 4 TCONS_00035013_5 145 0.948371371593175 4 0.7224547580943 0.00408201833907709 0.00632667083944759 0.00260884475402462 0.00226203780268112 0.00285378061744426 0.00187175463783617 0.00216536865533195 0.00283683691530989 0.00585936717075475 0.000477961400202149 0.000280324421216191 0.000427888502702365 0.000922811839832132 0.00464580267728802 0.00409517893538649 4.38525033364197e-05 0 0.000557322748975963 0.00203512386315286 0.00365956450087724 0.00111649903499415 5.83714587169214e-05 0.000156903005977779 3.1592781550722e-43 0.00410014652370664 0.00335727006054721 0.00280360174409692 1.09238743726779e-13 6.37604945890575e-05 0.00020013109097849 XM_005213678.1 ZAR1L PREDICTED: Bos taurus zygote arrest 1-like (ZAR1L), transcript 0.0 1025 100.00 0.125637048526479 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 760 68.63 0.483935298027919 TCONS_00035013_17 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-27 108 41.13 0.796610169491525 1 noncoding CTGACCTTGAGAATAGCTATGAGTGAGTTTTTAGAACCCAAATATGGCTATTTTCACTGTAAAGATTGTAAGACCAGATGGGAGAGTGCTTATGTGTGGTGCATCTCTGGAACTAATAAGGTTTATTTCAAACAACTCTGTTGCAAATGCCAAAAGAGTTTTAACCCTTATCGAGTGGAAGCAATCCAGTGCCAGAACACAGGCAAAAGTCACCTGTAACAAGAAATCAGCACAAACCACTCAATCAATCTTTCCCTCCAAGGACAAAAACCAAATGGAAGAAAGAAACAACCCTAAAGTGTGGGAAAAGACCTCAAGTGGAGCATGTTAGAAAAAAATGATGAAAAGACAGAGAAATACAGCACAAATGAAAGAATAAGGTAGAAACACACAAGACCAAATAAACGAAGATGAAATAAGCAATCTACTTGAAAGAGAATTCAGAATAATGATAGTAAAGATGCTTCAAAGACTTGAAAATACAATAGAGAAAATGCAAGAAACATTTAACACAGTTAATAGAATCACCAAGGACATACAAGAAATAAAGAATAAGCAAACACAGATGAATAGCACAATTACTGAAATTAAGAAATACTCTAGAAGGAATCAATAGCAGAATAACTGAGGCAGAGGAATGGATAAGTGAGCTAGAGGATGGAATGGTGCAAATAACTGCTGAAGAGCAGAACAAAGGAAAAAGAATGAAAAGAATTGAGGATAGCCTCAGAGACCTTTAGAACAATATTAAATGCATCAACATTCAAGTTATAGGGATCCCAGAGGAAGGAAAAACAAAGTCACTGAGAAAATTTTTGAAGAAAATAAGTTGAAAACTTCCCCTACATGGGAAAGGAAACAGTTAATCAAGTCCAAGAAATACAGAGTCCCTTACAGGATAAACACAAGGAGAAATACATCAAGACACATATTCATCAAGCTAACAGAGATTAAGCACAAAAAAAGAATATTAAAAGAAGCAAGGGAAAAGCAACAGGAAACATACAAGGGAAAGCCCATACAGTTAACAGTGAATCTTTCAGCAAAAACTTTACAGGCCAGAAGGGAATGGCAGGATATATTTAAAATACTGAAAGAGAAAACTCTACAACCAAGATTACCATACCTGGCAAAGATCTCAATCAGAATTGATAGAGAAGTCAAAGTTTTACAGACAAGCAGAAGTTAAGAGAATTTAGCACCACCAAACCAGCCTTGCAACAAATACTAAAGGGACTTATATAGCCAGTAAACACAAGAGAAAGGAAAGACCTACAAATATAAACCCAAAACAATCAAGAAAATACCAATAGAAACGTGTGTCAATAATTACCTTAAATGTAAACAAATTAAATGCACCAACCAAAAGATAAAGGATGACTGAACGAATTCAAAAGCAAGACCCATATATATGCTGCCTACAAGAGACCCACTTCAGACCTAGAGACACATACAGACTAGAAGGAAAAGGATGGAAAAAGATATTCCTTGCAAATGGAAACTAAAAGAAAGCCAGAGTGGCAATCCTTATTTCAGACAAAATAGAGTTTAAAGAATATTATAAGAGACCAGGAGGGACACTACATAATGATCAAGGGGTCAATCCAAGAAAAAGACGTAACAGTTGTAAATATTTATGCACCCAACGTTGGAGCACCTCAATACATAAGGCAAACACTGACAGGCATAAGAGGGGAAATTGACAGAAACACAATAATAGTAAGGGTCTTTAACACCCCATTTATACCAGTGACAGATCATCAAAACAGAGAATCAATAAGGAAACACAAACCTAAAATGAAACATTAGATCAAATGGATCTAATTGATATCTCAGGACTTTCCATCCAAATGCAGAAAATACATTTTTTTCTAAAGTGCACATGAAACACTTTTCAGGATAGACCACATCTTGGGCCACAAACCAAGCCTCAGTAAATTTAAGAAAACTGAAATCATATCAAGTATCTTCTCTGACCACAACACTATGAGACTAGATACCAACTACAGGAAAAAAACTGCAAAAAAAAAAAACAACACGCAAACTCATGGAGATTAAATAGTACGTTACTAAATAACAAAGAAGTTGTTAAAGAATAAGAAAGGAAATCAAAAGATTCCTAGAAACAAATGAAAATGAAAACACAGCAACCCAAAACCTATGGGATTCAGCAAAAGCGGTTCTAAGAGGGAAGTTTATAGCAATACAATCATACCTCAAGAAGCAAGAAAAGCACTGAACAGACAACCTAACTCTATATCTAAAGCAGCTGGAAAAAGAAGAACAAAAAAACCCCCAAAGTCAGCAGAAGGAAAGAAATCATAAAGATCAGAGCAGAAATAATGAAAAGGAAATGAAAGAAACAATAGCAAAGATTAATAAAACTAAAACTTTGTTTTTTGAGAAGAAGATAAACAAAATTGACAAACCACTAGCCAGACTCATCAAGAAAAGGAGAAAGAACAAATCAACAAAATTAGAAATGAAAAATAAATTGCAACAGACAATACAGAAATACAAAGGATCGTAAGAGAATATTATGAGCAACTATATGCTAATAAAATGGACAACCTAGAGGAAACGGACAGATTCTTAGAAAAGTTCAACCTCCCAAGACTGAACCAGTAAGAAATAGAAATTATGAACAACTCAATTACAAACACTAAAATTGAAACTGTGATCAAAAATCTCCCCAAAAACAAAAGCCCAGGGTCAGATGGCTTCACAGGAATTATATCAAAGATTTAGAGAGGAGCTAATGCCTATTTTTCTGAAACTATTCCATAAAGTTGCAGAGAAAGGAACACTTCCAAACTCATTCTATGAGGCCACAATCACCCTGATACCAAAATCTGGCAAAGACAACACATAAAAAGAAAATTATATACCAATATCACTGATGAACATAGATGAAAAAATCCTCAACAAAATTCTAGCAAACAGAATTCAACACGTTAAAAAGCTCATACACAATGATCAAGTTGGGTTTATTCCAGGGATGCAAGGATTCTTTAATATATGCAAATCAATCAATGTGATACACCATATCAACAAATTGAAACATAAAAGCCATATGATCATCTCAAAAGGCAGAAAAAGCCTTTTGACAAATTCAGCACACATTTATGATGAAAATGCTTCAAAAAATGGGCATAGAAGGAACCTACTTCAACATAGTAAAGGCCATATATGATAAGCCCTTGGCAAACATTATTCACAATGGTGAAAAACTAAAAACATTCCCTCTAAAATCAGGAAAAGACAAGGGTGTCCACTCTCACCACTGTTATTCAACATATTTCTGGAAGTCCTAGCTACAGCAATTAGAGAAGAAAAAGAAATAAAAGGAATCCAGATCGGAAAAGAAGTTAAACTCACTGTTTGCAGATGACATGATACTATACCTAGAAAACCTTTCAAAAGAAGCTATCAGAAAATTACTAGAGCTAGTCAGTGAATTCAGCAAAGTCATGGGATACAAAGTCAATACACAGAAATCACTTGCATTTCCTATAGTCAGATCAGTTGCTGAGTTGTGTCTGACTCTTTGCATCCCCACAGACTGCAGCATGCCAGACTTCCTTGTCCATCACCAGCACTTGGAGCTTGCTCAAACTCAAGTCGGTGATGCCATACAACCATCTCATCCTCTGTCATTCCTATATACTAACAATGAAAAATCAGAGAAATTAAGGAATCAGTCCCAGTCACCACTGCATCAAAAAAGAATAAAATATCTAGGAATAAACCTACCTAATGAGACAAAATACTGTATATGGAAAATTATAAGACACTGATGAAAGAAATCAAAGACAGTGTAAACAGGTGGAGAGCTATTTCATGTTCCTGTGTAGAAAGAATCAATATTGGGAAAATGACTATTCTACCAAAGGCAATCTACAGATTCATGCAATGCCTATCAAACTACCAATCTTTTGCAGAACTAGAACAAAAAATTTCACAATTCATATGGAAACACAAAAGACTCCAAATAGTCAAAGCAGTCTTGAGAAAGAAGAATGGAGCTGGAGGAATCAACCTTCCTGATTTCAGATTATACTACAAAGCTGCAGTCATCAAGACAGTATGCTACTAGCACAGAAACAGAATAAAGACCAGTGGAACAAAATAGAAAACCAAGAGAGAAAACCACACACTTATGGGTACTGTTTTTGACAAAGGAGGCAAGAATATACAATGGGGCAAAGATAGACTCTTCGATAAGAGGTGTTGGGAAAACTGGACAGCTACATGGAAAAGAATGGAATTAGAACACTTTCTAACACCGTACACAGACATAAACTCAAAATGGATTAAAGACCTAAATGTAAGACCAGAAACTATAAAACTCTTAGAGGAAAGCATAGGCAGAACACTTGAACTTAAAAGCTTTTGCACAGCAAAGGAAACTACAAACAAGGTGAAAAGACAGCCCTTAGAATGGGAGAAAATAATAGCAAATGAAACTGACACTTTCCAAAATATACAAGCAGCTCATACAACTCAATACCAG EMBV3_35904 GAATTGCAAGGCTACGGCATCAACGCTTCTTTTAACTTTTGTCTTCTGTCTCTGGAGCAC Gene BVT0102_206841 + 0 NULL GK000008.2:41979553-42029751 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225126 1 XLOC_137688 Coding TCONS_00225126 XLOC_137688 NonCoding Coding - 8:42011228-42014289 - TSS168632 3061 2 TCONS_00225126_6 82 0.491996079712512 1 0 6.55454178555294e-05 0.000924123224988604 7.72779224963097e-05 5.42578238150895e-06 6.21766952689057e-05 9.00970923764102e-05 8.95427632827406e-05 3.90197096967578e-06 1.21290865227851e-05 0 3.3561755673558e-06 1.48683743884213e-06 1.34607187118313e-05 1.53674957093701e-06 5.12899098877173e-05 0.000129426008954288 0.000162714270068371 0 0.000164281991503548 0.00015108018590801 6.80538483715166e-05 0.000807465323173115 0.000344663928453613 2.19073894383257e-05 0.000104849239424033 7.17284139896953e-05 4.23755033001252e-06 3.13792621039154e-06 4.86450150187211e-05 5.83910563724035e-05 XM_870793.6 FAM101B PREDICTED: Bos taurus family with sequence similarity 101, member B (FAM101B), partial mRNA. 5e-42 178 90.15 0.042796471741261 0 noncoding 0 0 0 0 -0.406978054303581 0.305818867658593 -0.00606163892750589 0.89890907727541 ACATATCAACAAAATTTTAAATTTAAAATAAAGATGTACTACTGATACAAAATTGAAAGGACCCCTGGAGAAGGCAATGGCAGCCCACTCCAGTGTTCTTGCCTGGGAAATCCCATGGACGGAGAAGCCTGGTGGGCTACAGTCCATGGGGTCACAAAAGAGTCAGACACAACTTAGCAAATAAACAACAACCGTAACGATAAATACAAGAATTGCAAGGCTACGGCATCAACGCTTCTTTTAACTTTTGTCTTCTGTCTCTGGAGCACTTTTATATGTGCTATGGTCATTTTATCATTTGAGTTGGATGTTGCACTTGTGCAAAACCCTTGTTTGGATTGTGTAAACCTGAAAAATACCATAACAGTTGTCAAAAGAAAAATTAATCTGTGATCCCGAACTGAAGATAATCTGGAGAATTAGTACATTCATCACATAAAGTGAAATATGTTATTATACTCTGACCACCTTAAATAATCTAAGTGTTTTTATGCCTTTCTCCATTGCACTTTCGTGCTGTTCATTTGACTATGGAATCCTGTTGCTTGGTCTTGAAGTCATTTTTGAGATAAAATTGAAATGTTTTCTTCTCTGTTCCAGATGTTTGCAATAATGTGTGACTGACTTAAATTCTAACAATAAAAAGATACTTTCTCACAGGGGAAAAAATACTGAATGGAGACAGAGAAACTAGTACTATGATGTCTTAATTGGTTTAGGCTGCTATAACAAAAAATACTGCACGAGATGGCTTAAACAGTCAAATTATTTGTCACAGTTCTGGAAGCTGCTAAGTCCATGATCAAGGTGCCAGCAGATTTGGTGTCCATAGATGACCAGCTTTCTGGTTCATGTTCACATATGACAGAAGGGGCAAAGGAAATCTCTGGGTTCCCTTTTAGAAGGGCACTAATTTCATTCATGAGGTCTCCACCCTTGTGGCCTAATCACCTCCCAAAGCCCCCATCTTCAAATACCATCACACTGGGGATTAGGTTTCAAAGTCTAAATTTCAATAGCATATACTAGAAGAGTTTTTTTAAAAGACTGGAAGGAGGTATGTTGCAAATTTCACAAAGAATGGCAGTTGCAATTTGCTACAGCAGAACAAAATGAAAAGGATGTTTGTTGTGTAAAAAGAGACATGTTAAGCCAATAATAGTGAAATTTCCTCTTACGAGTCAAAGAAAAAAAACCCTTACAGTATTAGTTATCTGAAATCAAAATTAAATGTTCAAAATGTTTTTTAATAATTTTTAACAGGATTTGAACTTGTAACTTTGAACTCTTGCGTGTGCACATAAACATATACACAAATATTTTTAGGTGGAGAAATGGTTAAAAAAATATTTGTTATAGAAACTTTGTTAGGAAATTATGAGAAGCCAAAAAATACTTTATAAAAGTTAAAAGATCTTGAATTAAACAAAGAATTGTTCAAAGAATTCAAGACCTTTTTAATAATATCAAAGGTCAATTAATTTATAATTTGAAAAATGGCAAGTACTTTTCTTTAGTTTTAAATGAATCATACGCTATAAATGATACTGCCCAATTGTACTTTGGGTTCATTCTGTGTCAAAGGACTTTCAGATTTGTGGAGAAACATCAATTTGTAACTTAAAAGTTTATGGTATAGGTATTTTTAAAGAAGACTCTCCCCCAAATAAAGATTTCTATCATGATAGATAGTGTTCCAGCTTACATTAGATCAAAAATTTGGATTCACTGTAGTTTTTTTTTAAATGAAGTATAGTTGATTATTTATAATTTTATATTAATTTCAGGTATGCAATGTAATGAGTCAGCATCTTTACAGATTGTGCGCCATTAAAAGTTATTACAAGACAATGGCTATAATTCCCTGTGCCATACAAAATATTGCTTATCTTTTTCTACATAGTAGTTTGTGTCTCTTACTCTCATGTCCCTAACTTGCCTCCCCCTCTTCAGTGTGATAAACACTAATCTGTTTTTTTGCTCTCTTTTTAAATTTTTATTGGATTTACAACGTTGTATTCGTTTCAGAATTCAGTGCGGTTTTATTGTGAGAGATGGATGGTGCCCTTATTGCTGCATTCTGCTGTGTGGTGTTGACAGAACTGAACTGTATCTGAGCCCTGTGTCCCTGGAAAAGGATACCGTAAAGGACCCTCGTACTCACAGTTTCTAAGACCTACCTGCACCCTTCCTCACTATGACTCCCCTGTTTACTTGGTTCTATAACCCCCATTTGCTTTCTTCAAAGGAAAATACTTTTTTTTTTCCTCCAGAGAAAGGAAAGGGGACTTACTTTTTTCCTTCATACAATGAAATGTCATAAAAGTTGATTGTAAGGTACAAAACTGTTCAACATGCAAAGGGTAGTACTTTGCTGTATCTTCATCCAACAGAATTTGGCATTTTTATTAATGAGGATCACTGTATTTTATTAGACTTCCAGAAGTTAACATCTTTCTCTACAGCACTGCACAATAGTCAAGGGCACTGGAAGGTCAGAGCTCTTCAGAATCAGATAACCCTGGAAGGTGCTCTAAATACCTCACATTCTTTTGAAGGGACACTCAGTAGTCTTTTTCCCATTACACAATTTTTCACAATTTTTTTTAGCATGTAAATTGTATGCATTTAAAATCTACAAGGTAAAATTCTGTATAACAAGAACTTGGTAGAGAATGTAACTGTTCACTATCCAATTGTTATCAAATATAAATTTTATAATCTGTCTCTAAATATATGTGTATATATATTTACACACATATATACCTGCTTGGGGTACTTAGACAAAAAAAAATTGCATTCCATTCATTTTTCTCCAAGACAGTGTAAACTCAGGCTTTGGAGCCAGACAGGCTTCTCCCAGAATGTTCTGTGTCTGGAGCACAGTGTTTCAGTCCATGTAGAACTGTGTTTACTAACTTACATCCTCAGCTCACACCTAGAGACACCACTAGCAGCAGACATACAAAACTGAAATCATGTGCCTTGTAGGAATGTCTTGTGCTATGATGCACACTTGGGTCCGGCTGCCACTGCCCTCAGCCCTATCTACCGCATCCTT TCONS_00225111 s 5' 0 TCONS_00225111 s 5' 0 EMBV3_40842 CCAGATTTCATAATTCCAGTTTTCACATTCCACTCCTGGTACAGCCATTCCCATTCAGCC Gene GeneID:615255|GMFB:NM_001101237:131_cdna UTR3_Alt 1 NULL GeneID:615255 10 GENE GMFB NULL glia maturation factor, beta EMBV3_39634 TCTGTCATCTGAAGATGGGGCTTACCAAATGAAGTCAACACCAAAGGGTCAGATGAGTAG Gene BVV0102_020210 + 0 NULL GK000023.2:15030446-15033346 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132451 TCONS_00132449 TCONS_00132453 TCONS_00132450 TCONS_00132452 1 XLOC_080782 Coding TCONS_00132453 XLOC_080782 Coding Coding NFYA 23:15012465-15032911 j TSS99093 4089 1 TCONS_00132453_3 312 0.0178527757397897 9 0.8004402054292 2.38522385955743e-11 5.16712412733915e-06 4.28249986893849e-07 7.93501102766055e-05 5.03544249960723e-09 6.42119987241341e-05 1.09627084345722e-10 1.26917524223537e-11 2.03076033622507e-09 9.25443625769371e-05 7.58197888109926e-05 4.73478901822115e-06 0.000286307817938707 0.000303981693372798 0.000244861230410815 0.000901163409641576 8.49007480065407e-07 0.000271635087104682 5.07298970978166e-08 0.000305613947675162 0.000214119456007094 0.00181255283288193 0.000196382617405179 0.00120397867882054 9.30608923961509e-05 0.000120706796764953 0.000124333137321833 8.87861879900948e-07 6.76957745923026e-05 0.000382343234682272 XM_005223476.1 NFYA PREDICTED: Bos taurus nuclear transcription factor Y, alpha (NFYA), 0.0 6486 100.00 0.879188065541697 NM_021705.3 NFYA Homo sapiens nuclear transcription factor Y, alpha (NFYA), 0.0 2778 82.00 0.674003423820005 TCONS_00132453_3 sp|Q5E9S2|NFYA_BOVIN NFYA_BOVIN Nuclear transcription factor Y subunit alpha; 3e-172 486 90.03 0.996794871794872 1 coding 0 0 0 0 -0.0423257498515783 0.729747439430794 0.0449619855769481 0.409540762338638 GGTAATGTGGTCTGGTATTCCTGTCTCATTAAGAATATTCCACAGTTGTGATCCAAACAAAGACTCTAGCGTGGAGTGCATCTGGCAGTCCTCTAGGGTCTCCAGAGTGACGCTGACTGTGGACAGGACTCTGATTTGGAGGGGCCATGGAACAGTATGCAGCAAACAGCAACAGTTCAGCAGAGCAGATTGTTGTACAGGCTGGACAGATTCAGCAGCAGGTCCAGGGGCAGCCATTAATGGTACAGGTCAGTGGAGGTCAGTTAATCACATCAACTGGCCAACCCATCATGGTCCAGGCTGTTCCTGGTGGACAAGGTCAAACCATCATGCAAGTACCTGTATCTGGGACACAGGGTTTGCAGCAGATACAGTTGGTCCCACCGGGACAGATCCAGATCCAGGGTGGGCAGGCCGTGCAAGTGCAGGGCCAGCAGGGCCAGACCCAGCAGATCATCATCCAGCAGCCCCAGACAGCCGTCACTGCTGGCCAGACGCAGACACAGCAGCAGATTGCTGTCCAGGGGCAGCAAGTGGCACAGACTGCTGAAGGGCAAACCATCGTCTATCAGCCAGTTAATGCAGATGGCACCATTCTCCAGCAAGGCATGATCACCATCCCCGCAGCCAGTCTGGCAGGAGCACAGATTGTTCAGACGGGAGCCAACACCAACACAACCAGCAGCGGCCAGGGGACGGTCACTGTGACGCTGCCAGTGGCAGGCAACGTGGTCAATTCAGGCGGGATGGTCATGATGGTACCTGGTGCTGGCTCTGTGCCTGCAATCCAGAGAATCCCTCTCCCTGGGGCGGAGATGCTTGAAGAAGAGCCTCTCTATGTCAATGCCAAACAGTACCACCGTATACTTAAGAGGAGACAAGCTCGGGCTAAATTAGAAGCAGAAGGGAAAATTCCAAAGGAAAGAAGGAAATACTTGCATGAGTCTCGGCACCGTCATGCCATGGCACGGAAGCGTGGTGAAGGCGGACGATTTTTCTCTCCAAAAGAAAAAGATAGTCCTCATATGCAGGATCCAAATCAAGCCGATGAAGAAGCTATGACACAGATCATCCGAGTGTCCTAACCCCAGGCCATGTGATGGAGCTGATCAAGGCCATATTCCTCACAGTTTCCCACTGTTCCAGGGAAAATGATCAACTCGCCGATGGGACACTGACGATCACATTCTGCCCTTTTCTACAGGACAGAAACCACTTAGTTTTTAATAAGTGGCTCAGTATTATAATTGCAAGGATGTCTGGCAAACTGAAGTTGCAAGCCTTGTCTCACCCTTTCAGTCAGGACTTATCTCAGACTGTTGCTGACATTGACATTTCATGGATTGGGATGATGCAAGGGACTCATGCCAGCCCAGCAGCACACACACAGCACTTGTGTTGACTGGTGACGCCAGCCAGCCATCTGAGCAGAGGAGAGCAACCTTCTCAACCTAACTGCAACTGGGGAAGCTGCAGCCCATTACTTCCCACAGATTCTGAACAGTACCCATCCCTCTAATGGGGGATCTCAAGCTGACTGATGGACCTTTTCTATTCAGAGATGGTTTCCAGGCAAGGAAGCTCCATCTCATGATATGGAAACAATAAATTCTGAGATAATTCATCTAATCTGTGGTAATAATAAGAATCTCTTCTACCCAGATGATAGATTGGGATTTTTGGACTCCCGCCAAGAAAAAGCTAACTCTGGGGATAGATTGATAAAAGATTCAAGCACTAAAAACATAAATTGCTGGATCTCTTAGCTTTCACAAGGTGTGGTCTACTTGTCTGTCTGGTGACAGGTCATATCGACCATAGTTCTTGCTGAGGCTACTTGTAAGATGATTTTGAGGGTGCTGGACCTTGAAACTGCCTTTCCTTAGTAGAAAACAAAATTATACAACTTCTGTGCTGAAGTACTGAGGACATGTACAGTAACTCCAAAACAGCAAAACTAGAGATTTTCAATCATAGGCTTTGTGACAGCATTTGGGGAATAGAAAGGTTCGTATGTGTTTCAGTCCAGAAGGACAAAGAGTAGTATATATCCCTTGTGATGTCATATAGCATGATTCGCCAGTGGATGGATGCCTGGGATGGATCATTATAATGAAGAGAAGAATTTACATTTATGCTATAACCTTTTAACAAGCATGGAAAGGGAAGTCTGAGATTTGACCCTTGACAACTTCTGGAAAGCACTGTTCAGTCAAGCTAGCTGGGACATAATCCAGGTTGCCTGCTAGAGTGTGAGGTGGATGTTGGCTTCACTCCTGCTGTGCTTTGTGCTGGCCCAAGAGAGTGAACATTCTCATTCTTCCCGTGGCAGCTGATTCTTTGGTACCAGTTTCCGTTCGTTTCCCCTTTTCTCCATAGGTCTTGTGCAGAAAGGCTTTCACTTTGCATCCATGTTCTGGGGGTAAAGTACAGATTGGAGATAGAGATTCCTGCAGGGTCAGGAGCAGGGCTGAAGTCCCCAAAGTAGGCTGTGCCTCAGAAAAAAAAAATGTTTCTTTTCTAGATGTGGAACCCTGGGAGAACTAAGGTGATTTCAGAAGAGTTTTTGGGTTTTGTTTTTTTTGTTTTTTGGTTTTTTTTTTTAGAAACAAGGAAAACTTTGTAATTCTTTCCAAGAACATTTGGTTTCAATTTCAATACCAAGACTAGGGATTGGCTCTTCCTTTGATATCACTCTAGCTGTATTAAGAGGGAAAAGAAATTAAACCCACCAAAGAAAACATCACAAAAGGAAATCAGTGTAATGGTACAAAACAGAGGTACAGAGCTGTGCAGAGAAAGCAGGAAGTGAAGTATCTCCCTACTCCCTTGAGTCTACTCATCTGACCCTTTGGTGTTGACTTCATTTGGTAAGCCCCATCTTCAGATGACAGATTACTAAAAACAATGAGGAGTTTTTATCCTTTGGTTTTGTTTAGGAGTCTTCAAGATGCAGAGTTCAGAAGAAATTCCTCAGAACTAATTTCTAGTACTTAAGCCAACAACAGTTCTAAAATGCTATTTATTTGTGTCTGTAAGATTGTACATATACTACCAACCTCATACTGTTGTGGATTATTTTCTCACAAATTTGGGTTTGTTTTTTTTTTGAATGCTTCAGTTGTCATTTTGTCATTGCATTTCAGACAGCTCATGACCCTTTTATTGTCATTTTAGCACATAATAACCCATAAAGTTGGGGTGAGGTTTGGATTTTTTTCTTTGTTACTAGAAGTTTTTTTTTTTTTTTTTAATCCTCTCCCACCTCTCCCCCCACCCACACCCCTCAGATACTCTAGAAGTTCTTTTATTCATTTGTCCTTGTGACTGTAGTGATGCAAAAAGAGTGAATGGATGAGTGAATAATTGGTTTAATACATAGTTATTTTAAGTGCTTTTTTTGGCAGGATAATTGTAAATGTATATATTTTAATTGCACTGGTACATTGAACATGTCAGTGTCTATACCACTGGACCAAAAGAGCATTTTTAGAGCATTCTTCTGGCTAATGGATGTCTGGTAATAATGTCTTGATTTTCCTTCGGGACTCAACTACATAGGAGGATTTGGGTTTTTTTCCCCCTCAGCAGTGGAAGAAGCACAGGTGATGGATCATTGATGTCATTTCAGTTGTTACTTTTTAAAATAAATATAAAAATGCTAAAAAGTGTCTTGAATTTTGAGGAGTCTACATCCCATAGGTTCTGGATTGTGTTTATTATGTATTGCAATCTTTGTAAACACATGTGCTCCGTGGACAGTGTGAAACCAGGAGCTGTGTGTTGCCCCTTCACCTCTTTTTCTGCCCTTTGGCCCTCCCACTCTACTGAGGAGATACTGCTGTCCCCTGTGGTTGATCATTTATTTGATATTCTCACTGGACGTGTTCATTAAGAGGCAGTAATTCCATGAGTAAAACTAGCCCTTTGTCACCAAAACAGCATTGACACATGTAGAACTAAACAGTGAAGATGTGGTTTTTAATTTCTTTATGCAGGAAAACAGATGCATTTCTGTGATTGTTAAAAATCTATAATATACTCATCCTTTTATTGCTTAGTATTTTAACAAATACGACCCACAGACCG EMBV3_17790 GTTGCATCCACATGTTCCCGTTTGCAGAAACCTCGCAGGACAGTACCGATATCTTGCATT Gene GeneID:522707|RAP2A:XM_002691964:12_cdna UTR3_Alt 1 NULL GeneID:522707 12 GENE RAP2A NULL RAP2A, member of RAS oncogene family EMBV3_25063 CACCGTCTCATACTACGGGATAGTCCTCGACCTGCAGAACCTGGGGAGCAACATCTTCCT Gene GeneID:518926|SLC22A11:XM_002699382:342_cdna Constitutive 0 NULL GeneID:518926 29 GENE SLC22A11 NULL solute carrier family 22 (organic anion/urate transporter), member 11 EMBV3_20657 TTCATGGGGAATCCAGTGAACTGTTTGTGGTCCAGGCCTCTGTTGCATAGATGTTGGTCC Gene BVT0102_097713 + 0 NULL GK000009.2:36953273-37023770 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14392 GCTGCCGGGCGGTCCGGGGCTGCCGGCCAGGGACAGCCCGGAGGCCGTCCGCGATGTGGA Variant GeneID:613996|CARKD:XM_002691991:87_cdna 49^334 1 EMBV3_08177 GeneID:613996 12 GENE CARKD NULL carbohydrate kinase domain containing EMBV3_11472 AGATAAACAACCACCAGTGAAACAATTGAGTGCCTGTCGTGGGTCAGGGGCTCTTTGGAC Gene BVT0102_277543 + 0 NULL GK000008.2:70817440-70833742 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228065 1 XLOC_138411 NonCoding TCONS_00228065 XLOC_138411 NonCoding NonCoding - 8:70827448-70833541 - TSS170133 2833 3 TCONS_00228065_1 89 2 0.535292186474064 0.000437834460963139 5.49774018622477e-05 5.2808380044637e-05 0.000608229121060897 0.000123937755955322 7.70208745052982e-05 0.000146152754835738 3.54924603570056e-05 0.000281293186072548 8.59302109117627e-05 4.04021030403801e-06 1.26215441389402e-06 2.12689676823021e-05 0.000161061340242847 5.54176933088692e-05 0.000689889316199762 0.000257854110248289 0.000867952586089888 3.2905726862387e-05 0.000333805399273112 2.67890340195563e-07 0.000227885029129442 0.00010362495229961 0.000284046082922252 0.000178531266152207 9.94771982013564e-06 2.34393148393633e-05 6.78092775696921e-06 5.65483330471803e-05 1.90999714664445e-05 XM_005200217.1 LOC785867 PREDICTED: Bos taurus rho-related BTB domain-containing protein 2-like (LOC785867), mRNA. 0.0 3142 98.94 0.630074126367808 NM_001160037.1 RHOBTB2 Homo sapiens Rho-related BTB domain containing 2 (RHOBTB2), 8e-27 127 71.47 0.106953759265796 0 noncoding GGTGGGCTCGGGAATCACCATGATGTTGGACCCATCATGAGAATCAATCTGTTGTCAACTTCAGCAGGTAACTCCATAGGATATGACCGTGTTGAAGGGGTGGGATGCGGTAGGAGTCAAAGGTCAGGGGAAAGGGCACTGACATGGAGAATAGGAGTCTTTGTAAAGAAGGATCGTAATGAAGTACGTGACCTTACTCAGTGCTGGTTGGTGATAACAGGGAAGAATGGGGGAACTGAACAGGAGCAAAACCAAGGTCAGTCTAGAGAAGAGGAGGGAGGAGACTGGAGGATGGTGGAGGATTAAGACAGTATCTTGCAGCCCATGGGGGAAAGCTGGGCCACAACTGACCCTCTCCCCCTTTTCTGATTCTGATTTGTATCTCACTCCACACACCCTTGTTAGATTCAGAACACAGGGTCCCTCTGATGAAGGTGGAGCCAGAGAGACTGAGCTCCTGTCCTCAGCACTCAGGACTCATCTCATCTAAGAAAGATGCTTTAAGGAGAGGAACTGGGTTTTGGTCCCAGGGCCCGGTGTGGGGGGCTCTACCTCCAATTATCTGGCATAGAGCAACCGCCCGCCCCCCCACCCCAAAAAATGGAACCTCTGCATCAATTTTTTGGTGCCAAGACCTAGAGATTTGAGGTCAAGGCCTTGTCAAGAGAAGGAGCAGGAGGTGGCAGGTCAAGTGCGTCTTCAATGGCTATGACCCTTGGTGTCCGAGAGCCCTAGACTTCAAGGCCATGGCTGCCTCCCCTCCAAGTCCTCCAGGTGGCAGGCTTGGAAACCAGACATGTGCTGCCCTCTACTGGCTGGTCAGCTCACTTCTGCTGAGCTCAGGGTGAGGCTGAGGTGAAGGGGACAGAAGGGGAACCTCCTAGGTGGGGTGTGCTGCTCTGCACCAGCCCCTTCACTCTGGGAAGGGTGTAGGAGGGGCCATGGGGGCCTCCCAAGAACTCTAGGGGGGTGGGAGAGCCAGGACCTGAAGTCCAACAGCAGGGGAATTAGGTCTCCATGAGCTTACAGGCCTGAGGCGTCTGGCCCAAAGATGAGGATGCAGAAAGGCCAGCAGGGACAGAAAGGGAAGGCGGCTCAGGAGTGGCAGGAGGCTCACAAGTGAGAGGCCACAGCAGGATCCCAGCAGGCAGGGTCTCGGCACCCCTTCCAATAGCTCCGTCAGAACCAGTCCATACCTCCAGGAGCCCAGCAAGCCCAGGTGGGACTCAGAGATACCAGCTGGGGAGGCTGTGGGGGACCTGGGCCAGCCCAGTCAGGGGAAGGGCAGGGAGGAGAGGGATGGAGGAGGGGCTGAATTCCAGTCCCCCAGGAACCTGGTGCCCAGAAATCTTGAGTCAGAGCAGGAGACACATTCACACAGGGCAAGCTTGAGCCTGAGGCATAAAAGCGAGAAGGAAGGAGTGGGTCACACAGCAAGAACACACACTCCTGCACCCACGTCACTCAGAACTCTAGAGGAGAACGGGAGGATGGGGGAGAAAAACACACACATGCCTCTTTTTATATAAAATTGCATATTTAATTTGGTCATGGATTCATAAACACATGAGTATTTTGTACCTAATGGCCTTTCTTGTACTGTTTGATATTTCCAACAAACTCTTCTAAGGTGAGAACTTCCAACGGAGAGAAGAGTGAAAAGATAAACAACCACTAGTGAAACAATTGAGTGCCTGTCGTGGGTCAGGGGCTCTTTGGACTGGATATAAAACAAGGCAACTTCAGGCTCTCCTCAAGCTTACCTTAAATAAACATGATGAACTCTGACAAGGCTAATACTTTAGGTGGGCACTAAGGACGTCCTCCGAGAAAGGGATAAGTGACCTGACACTTGATTGACAAGAGTTCATTTCTATCTTCCTCTGAAGATGAAGGCAGAGTGCCCTCCACAAAAGGAACAGCAAAAGCAAGAAACACGTGACTTCCGGGGAACAGAGGGGCAGTAGGGCAGGACCTCTGAAAGGGAAGAGCAAAGGGCTATTGCACCAAGGCCACTGAGGTAGGACCCCTACCAAACTCCACTGGGGCACCATACCCTGAGGGTCCCTAAATACTCGGCCAATTTTAGTTGGGGTCCAGCCATGCCAGTCTTGGGCACACGAAGTTTTGAGATGGAAAAGATAAACTGAGGAGTACTAGTTTCATAACATCACCCTGCCATGACTGGAATACTGTAGAGATAGGTGTGGTGGAAGGAGGGCTGAAGTGCTACAAAGTATTTTTTAAAGTAAGAGGAAGTGATGTGCCCTCCCTGGACTGAGGGTGCTGCAGTGCATCTTCCGCACTAAGAGTACTCAAGCAAGGAAACCTCCCACTAAGAACTGGGAAAGGTAAACGGAGGAGGAGGCAGAGAAGGGGAGGAGACACCAGGAGGGGCCCCCTTGCATGTCTTTATTCTGAAAACAAGATCACAATACAGATGGGGCAAGATGGAAGAGCAGAAAGACCCTGAGCTTGGGTCCTCTCACGGGCAGCCCAAATTACAACTATATGCAGAGCAAGCACTGATAAAAAAGACAAGAACCTACCAGCATAGATCTTCTACAACTAAAGACATAAATCAGGAACCACACTGAGATGGTTGGAGTGGGCAGACTCACAATATCATCAAGTACCATACTCCTGGTTGGACAACCCACAAAGTAGGGAATTATATTGCAGGGTTTTTCCACAGGAGAGTTCTGAGCCCTAGTTGGGCTCTCCAGCCCAGGGATCCTGCATCAGCAAGATGAACCCCAAGAGCCTTTGGCTTTGAAGGCAAGCAGGGTCCTAATTCTGCGTGTCCCACAGGACTGGAGGAAACAGAGACTTC TCONS_00228066 s 3' 5682 TCONS_00228066 s 3' 202 EMBV3_09996 GCTTTCTTAAGCTCTGTGAGGAATGGCTGGGACGAGACCAAACAGACAGGAAGTTGGGCA Gene GeneID:100296458|LOC100296458:XM_002695024:290_cdna Constitutive 0 NULL GeneID:100296458 18 GENE LOC100296458 NULL hypothetical protein LOC100296458 EMBV3_30172 CATCTACCACGTCGGGGACTGGCTACAAGAGCGATATGAAATTGTAAGCACCTTGGGAGA Gene BVT0102_168262 + 0 NULL GK000003.2:15418776-15432099 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168636 TCONS_00168638 TCONS_00168642 TCONS_00168637 TCONS_00168634 TCONS_00168641 TCONS_00168643 TCONS_00168639 TCONS_00168635 1 XLOC_103150 Coding TCONS_00168641 XLOC_103150 Coding Coding CLK2 3:15422620-15431542 = TSS126437 2126 1 TCONS_00168641_3 499 13 0.763143145387288 0.00964141430292739 0.124566343025944 0.0101086585338578 0.0047262613993777 0.0100525125206616 0.00204882107134005 0.00490540852432416 0.00824888379095627 0.00594619611770343 0.00129859847210522 0.00141503934203074 0.000979833882479665 0.00153047586380115 0.00523739054759065 0.000402480013243247 0.0183229281786594 0.00687958133657712 0.0066128584963923 0.00673581704065273 0.000295502428771596 0.00453352675870402 0.00512579113479095 0.00362923191807361 0.00599466655562903 0.0130715159285781 0.00678339586098193 0.0143588280032901 0.00214046505207268 0.00189436349053638 0.00316187105591309 NM_001206264.1 CLK2 Bos taurus CDC-like kinase 2 (CLK2), mRNA. 0.0 3829 99.95 0.999529633113829 NM_003993.2 CLK2 Homo sapiens CDC-like kinase 2 (CLK2), mRNA. 0.0 3158 93.21 0.997177798682973 TCONS_00168641_3 sp|O35491|CLK2_MOUSE CLK2_MOUSE Dual specificity protein kinase CLK2; 0.0 887 97.39 0.997995991983968 2 coding 0 0 1 1 -0.221557804976678 0.265535498198278 0.000170062398406209 0.997801148996998 GGCGGCGGATCGGAGAGGCCAGAGCCGGAGACCGAGCAGGGATCGGGCCCCGGGCGGGGGCGGTGCGAGCGGCGCCAAGCGAATCCTGGGGGCGGGGACGGAGCCGGGGCGGGAGGGACTGGAGCGGAGCCCGGGAACTAGGCGGGAGGTCCCAGGGTCTCGGGTTGGGGGGGTGGAGCCGCACTTCGTCGCCGCGGGGGTGCCGGGACTCCGGCCGCAGTGCCGCCGCCATCACGGACTTCCTGTGGGACAAGCGCACGGGCCTCGCCGCCAGAACGATGCCTCATCCTCGAAGGTACCACTCTTCTGAGAGAGGCAGCAGAGGGAGTTACCACGAGCATTATCGGAGCCGAAAGCATAAGCGACGAAGAAGCCGCTCCTGGTCAAGCAGCAGTGACCGTACGCGGCGGCGCCGACGGGAAGACAGTTACCATGTCCGTTCCCGAAGCAGCTATGATGATCGTTCATCCGATCGGAGGGCGTATGACCGGCGATACTGTGGCAGCTACAGGCGCAACGACTACAGCCGAGATCGGGGAGAAGCCTACTATGACACAGACTACCGGCATTCCTATGAGTACCATCGGGAGAACAGCAGTTACCGCAGCCAGCGCAGCAGCCGTAGGAAGCACCGACGGCGGAGACGGCGCAGCCGGACATTCAGCCGTTCGTCTTCGCACAGCAGCCGGAGAGCCAAGAGTGTAGAGGACGACGCTGAGGGCCACCTCATCTACCACGTCGGGGACTGGCTACAAGAGCGATATGAAATTGTAAGCACCTTGGGAGAGGGGACCTTCGGCCGAGTTGTACAGTGTGTTGACCATCGCAGGGGTGGGGCTCGGGTTGCCCTGAAGATCATTAAAAATGTGGAAAAGTACAAGGAAGCAGCTCGCCTAGAAATCAATGTGCTGGAGAAAATCAATGAGAAGGACCCTGACAACAAGAACCTCTGTGTCCAGATGTTTGACTGGTTTGACTACCATGGCCACATGTGTATCTCCTTTGAGCTTCTGGGCCTTAGCACCTTCGATTTCCTCAAAGACAACAACTACCTGCCCTACCCCATCCACCAAGTGCGCCACATGGCCTTCCAGCTGTGCCAGGCCGTCAAGTTCCTCCATGATAACAAGCTGACACATACGGACCTCAAGCCTGAAAATATTCTGTTTGTGAATTCGGACTATGAGCTCACCTACAACCTAGAGAAGAAGCGGGATGAGCGCAGTGTGAAGAGCACAGCTGTGCGGGTAGTAGACTTTGGCAGTGCCACCTTCGACCATGAGCACCATAGTACCATTGTCTCCACCCGCCATTATCGAGCGCCAGAGGTCATTCTTGAGTTGGGCTGGTCTCAGCCTTGTGATGTGTGGAGTATAGGCTGTATCATCTTCGAATACTATGTTGGCTTCACCCTCTTCCAAACCCATGACAACAGAGAGCATCTAGCCATGATGGAAAGGATCTTGGGTCCCATCCCTTCCCGGATGATCCGAAAGACAAGGAAGCAGAAATATTTTTATCGGGGTCGCCTGGATTGGGATGAGAACACATCAGCTGGGCGCTACGTTCGAGAAAACTGCAAACCACTTCGGCGGTATTTGACCTCAGAGGCAGAGGAACACCACCAGCTCTTCGATCTGATTGAAAGCATGCTAGAGTATGAACCTGCCAAGCGGCTGACCTTGGGCGAAGCCCTTCAACACCCTTTCTTCGCCCGCCTTCGGGCTGAGCCACCTAACGCCAAGTTATGGGACTCCAGTCGAGATATCAGTCGGTGACGATCTGTCCCTGGGCACCCCTGTGTCTCTTAACAGCAGTGGGTGTCCAGTCCAGGACACTGGTGCTTTTTTATACAAGAGAACAGAGCCGGAGCTCACTCCTTCCTCCTGGCTCCCTATGTACCTGTGAATATGTGAAATAGTGTAAATATGAAAGAACTTGTACCACCGCTTCAACCCCTGCCTTGTACATAATGCTATTCCATCTCACACTCTTCCCACCCTCACCTGCCCCTTCAACAGCTGAGTTGGATCTGGGCAGAATGAGGTAACCAGAAGGCATCTACACCATGTTTTATAAGGAATTTTGTACAGTCTTTGTGAAATAAAATGATGTGCTTCACCCGA EMBV3_32927 AGCGAACTGTAACCCGGGGGAAGAGACTAAATAACAGAGCCCCGCTAGGATAAGCCACAA Gene GeneID:510395|PHF21A:XM_002693530:132_cdna Constitutive 0 NULL GeneID:510395 15 GENE PHF21A NULL PHD finger protein 21A EMBV3_41125 GCTGCCCAGCTTCTTGGGGAAAAGGACGGATGAAACTGCGTTCCAGAAACTGATGAGCAA Gene GeneID:282343|S100A4:NM_174595:31_cdna Constitutive 0 NULL GeneID:282343 3 GENE S100A4 NULL S100 calcium binding protein A4 EMBV3_24002 TCTGTTGGGATCCTACTGAGCCCCACCCTACCAAGGAAAGTCATGGGACCTCTTGTATTA Gene BVT0102_030031 + 0 NULL GK000025.2:11278866-11494716 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31277 GAAGATCAGCAATATCAGTGGCTGGAAAAGAACATTCCCCAGAGCACAGAGATACTGAAG Variant GeneID:614817|PSMG1:NM_001076347:39_cdna 486^821 3 EMBV3_29430 GeneID:614817 1 GENE PSMG1 MGC140766 proteasome (prosome, macropain) assembly chaperone 1 EMBV3_01976 AATGTCATCTCCGTGGGCTCAGGGCTGCTGGACTGCTGGATCCTTTGGTACCGCTGGACC Variant GeneID:508550|KRTCAP3:NM_001035062:84_cdna 247^436 2 EMBV3_34104 GeneID:508550 11 GENE KRTCAP3 MGC128201 keratinocyte associated protein 3 EMBV3_17754 ATCTGGTGTGTTCACCAATGATTTAAAGGGATCGTGGTCAGGGACGCCAAGAGAGTGGTG Gene GeneID:505545|BSDC1:NM_001035026:58_cdna Constitutive 0 NULL GeneID:505545 2 GENE BSDC1 MGC128906 BSD domain containing 1 EMBV3_41238 GCTAAGGAGGGAAATCTGGAACTTCTAAAGGTTAAACTTTCCAGTTTGAATTTAGATGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31915 GGAGGGGTGGGGAAGGAATTAGGTTGTTTGGATTTTGACTAATCTTCATAGGCCGTGTGC Gene GeneID:100335177|LOC100335177:XM_002707832:39_cdna Constitutive 0 NULL GeneID:100335177 8 GENE LOC100335177 NULL interferon stimulated exonuclease-like EMBV3_17167 AGTTTCTGTGATGGCTGAGGAAAGAACCGCTGAGAAGGACCCTGATGTGGGAAGGTTGGT Gene BVT0102_267285 + 0 NULL GK000004.2:71121494-71139310 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00184477 TCONS_00184476 TCONS_00184456 TCONS_00184478 TCONS_00184455 TCONS_00184474 1 XLOC_111354 NonCoding TCONS_00184474 XLOC_111354 NonCoding NonCoding NPVF 4:71104462-71138131 x TSS137360 959 1 TCONS_00184474_2 105 0.0521376433785193 3 0.971605084947131 0 0 5.26304124644949e-05 6.06143031638883e-05 5.14825760056862e-06 0 0 0.000157823564310575 0 0.000694716779766363 2.07523987636004e-186 4.97140732711836e-06 0 2.50076051623062e-05 9.72033184803414e-05 7.25790791051247e-05 0.000986787446577569 0.000190258866952164 0 5.24922054797322e-05 0 0.00123198502293254 0.00105754946662327 0.00035212036076438 0 3.67333922664207e-05 7.24602589960563e-240 8.79417089990551e-145 3.1262701914974e-05 0.000116657967330514 XR_234345.1 LOC101904318 PREDICTED: Bos taurus uncharacterized LOC101904318 (LOC101904318), 0.0 1007 100.00 0.580813347236705 0 noncoding CCAGGCGGCTCCTGGCCCTGGGGCCCGCGCGTTCTCTGCTGTGCACTGGGTGGTGGAGGAGTGCGGTGCCAGGGAGACTCTGATGAGGAGGGAGCCTCCAACACATCCATGTTCCTTACGCTCAATGGGGAACAGTGCGGCCTTATCGAGGGTGGCTTCCGCAGGACTCAGCACGTGCAGCCCCTACATTATGCCAGGCCGAGGCTCTTCTTCTTCTAGGTGGTGTGGACAGGGCAAACAGGCAGTGTGCCTGCGGTGGTCTACCCGATCAGCAAAGACCTCGCCCTGCTTCGATTACCTTTGTTACCACCCCCCACTTCCCCGCCCCCAATCCTCCCGAAGAAACCAATGTGAACCACAAATCTGCACCTACGGGACCGCGAGTATCTGTGATGGCTGAGGAAAGAACCGCTGAGAAGGACCCTGATGTGGGAAGGTTCACATTACTTGGTGTCAAAAGAGGTATTTGAAGGAGTTGAATCCCTAAAGAACTAACGGTCCTGGGAATCATGCCTGGTACCCACTTGATCCCCTTGTGTTCTCCACTCTTTTGGTCTGTGTCCTACAGAGCACCCGGCTCATTGTAAGAGTTCAACAAATAACTGCTGAAGGAATGAATGAAAGCTTGGGAACTGAAGCAGAAGAATTACCTCTCTGGGGTGTTGATATATGATTAATGAATGAACCCTTCTGAGTTAAGTACTTTTTTCCATTATAGTGACTAATTCCCAGACAGATGATTAGATTGAGATTGACTCTGATGTGAAATGGTTAATCATTTGGCCTGCCAAAAATACAAGATTGACTGGTATTTAGTCTGTTTTTTCCCCTTGTATAGACATGAATCATATACTGTATATGAAAAATTCTAGCACCCGTTCATAGCAGAGATATTTTTCTTATCTTTACTCACTAACAGTCCATAACTCAGAATTTTCCTTTCTTTAACTGCTAAAAGA TCONS_00181955 r 5' 13275 TCONS_00181956 r 5' 111 EMBV3_30958 TGCCTATGAGTTCGACCTCAGCCCTCTCAAATCTTTAGCAATTAAGGAGTTTTTCTCCAA Variant GeneID:507839|PRMT2:NM_001024495:21_cdna 904^1001 1 EMBV3_04596 GeneID:507839 1 GENE PRMT2 HRMT1L1 MGC129035 protein arginine methyltransferase 2 EMBV3_38507 TAACTCTTGGGAACAGGAAGAGGAAGCGGCTGGCAACTGAAGGCTGGAACACTTGCTACT Gene GeneID:540838|ARPC2:NM_001034713:122_cdna Constitutive 0 NULL GeneID:540838 2 GENE ARPC2 MGC126898 actin related protein 2/3 complex, subunit 2, 34kDa EMBV3_01744 GGAACCTAGGAAAGCACAGTGTGACTGGAGGCAGAGAAAGTGTTCATGGTGGCTCGAGGG Variant GeneID:517515|CCDC51:NM_001015619:184_cdna 234^617 2 EMBV3_00094 GeneID:517515 22 GENE CCDC51 NULL coiled-coil domain containing 51 EMBV3_05755 TAGCTCCTAAGTTGTAAAAGCAACTGTTTTGAACATCCATGTTAACGGAGAAGAAAGCAC Gene GeneID:534204|C19H17orf42:NM_001168010:274_cdna Constitutive 0 NULL GeneID:534204 19 GENE C19H17orf42 NULL chromosome 17 open reading frame 42 ortholog EMBV3_26779 GCTTCCAAGCATTACTTTAACCTCCCTCAACAAGGTATACGTCACTTCCTCGGTAGCTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39278 TGATAAAGATGAAGGACCTGCAGGAGCAGCAGGAGCCAGAGGAGGACTCAGGCAGTGACT Gene BVT0102_428034 + 0 NULL GK000030.2:143800700-143861797 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248640 TCONS_00248654 TCONS_00248642 TCONS_00248641 TCONS_00248653 TCONS_00248643 TCONS_00248639 TCONS_00248638 1 XLOC_151653 Coding TCONS_00248640 XLOC_151653 Coding Coding LOC100847680 X:143554460-143843053 j TSS185903 4394 1 TCONS_00248640_3 441 0.0430131998179335 7 0.984798608416034 0.00106996612849358 0.00237632435710225 0.00223165346590996 4.46659703152816e-05 2.58884077232344e-05 0.000935783716785867 3.22860159667792e-05 0.00059894464986967 2.44364437814664e-08 1.07300103274859e-05 1.1669903395485e-05 2.17643742081814e-05 1.69864829595369e-05 0.000100973259114614 2.49939140010346e-05 3.75610867202313e-07 6.94019535597315e-05 0.000117136435366896 0.00227210698077811 0.00300983229947201 1.99093466158944e-05 3.54711593914764e-05 4.47591606353861e-05 0.00169296441032187 0.00326010078082151 7.9983996105795e-05 0.000659891267901831 3.44125461155849e-05 6.57146428188642e-06 2.10365460576422e-05 XM_005200562.1 LOC101905937 PREDICTED: Bos taurus protein Shroom2-like (LOC101905937), mRNA. 0.0 5618 100.00 0.708693673190715 NM_001649.2 SHROOM2 Homo sapiens shroom family member 2 (SHROOM2), mRNA. 0.0 1418 82.67 0.306781975421029 TCONS_00248640_3 sp|Q13796|SHRM2_HUMAN SHRM2_HUMAN Protein Shroom2; 0.0 734 83.59 0.997732426303855 1 coding 0 0 1 1 0.0371702692971141 0.747316951775185 0.0118818786706602 0.800466109086396 GAATATGGATGGAGAAAGGAAATGGTTGCTGTAGAATACTGAACAGTTCCCTGGGCCGTACAACAAGCAGATGGTCAGCGTTCGGAGGACCACCCAGGAGCACTGCGGGACCCCCGGCAAACCTCTGAACCCCCTGGCAGCAGGGAAGGGCCCGAGGTGTCCCTGGAGGCCCGCGGCCGGGCGGGCACTCTCCCTCGCGATTACCGGTACCTGGAGCCGCGCACGCCCCTGGAGCCACCCGCCCAGGGGCAGGAGCCCCGGCCCCTGAGCGCCGCCGCGACAGCCCGGAGACCCGCCCTACAGAGGCCACAGCCGCCCAAGCGCGAGCTCTGGCCGCCGCCAGGGGACACGCCCAGCCGGCCTCACACCTCCGTGGCCTCCTCGGAGGCGGTGGACACGCGGAGCACGCGGCGCGTGGAGGAGCCCACGGCCCGGCCCTGGCGGGAGGCGCTGCTTCCCGCCCCGTTCCGGCCCCTGCAGACCTCCGCCATGGACAGCTCGCGCTCGCCGTCGCCGCAGTTCGCGCCGCAGAAGCTGACGGACAAGCCCCCTCTGCTCATCCAGGACGAGAATGCTGCCAGAATCGAGCGGGTGATGGACAACAACACCACGGTGAAGATGGTGCCCATCAAGATAGTGCATTCGGAGAGCCAGCCGGAGAAGGAGAGCCGCCAGGCACTGGCCCGCGTCCCCGAGCCACCTCCGCTGCCCCGGGGCCTCGAGCGGGACCAGATCAAGACGCTCAGCACGTCTGAGCAGTCCTACTCACGCTTCTGCCCCTACAGCCGCCAGGGTGCCGAGCCCCAGCCCGCCACCGGCGCCCTGGGGCCCCCCGCCAAGGAAGGCCGGGCCTCCCCTCCTGTGCTCAGCTACGTGAAGGCCAAAGACAGGACCGCCGACGACCTCAAGTCAGAGGAGCTGGCCCGCGAGATCGCGGGCAGGGATAAGTCGCTGGCGGACATCCTAGACCCGGGCGTGAGGATGAGAACCACCATGGACCTCATGGAGGGCATCTTCCCCAAAGACGAGCACCTCCTGGAAGGCGCACAGCAACGGAGGAAGCTGCTGCCCAAGGGGCCCTCGCCCAGGACGGCGGAGGAGAGGAGGGAGGAGACCAGTGTGCTGGCAGCCGCACCCTTGGCCACCAACTCCGCCTACTACAGCACGTCAGCTCCCAAGGCGGAGCTGCTGATAAAGATGAAGGACCTGCAGGAGCAGCAGGAGCCAGAGGAGGACTCAGGCAGTGACTTGGACCACGACCTGTCAGTCAAAAAGCAGGAGCTCATTGAGAGCCTTGGCCGCAAGCTGCAGGTGCTGCGGGAGGCGCGGGAGAGCCTGCTGGAGGACGTGCAGGCCAACAGCGCGCTGGGCGACGAGGTGGAGGCCCTGGTCAAGGCCGTGTGCAAGCCCAATGAGTTTGACAAGTTCCGCATGTTCATCGGGGACCTCGACAAGGTGGTGAACCTCCTGCTGTCGCTGTCCGGCCGCCTGGCCCGCGTGGAGAACGCCCTCAACAACCTGGACGACAGCACGCCTCCGGGCGATCGGCAATCCCTGCTCGAGAAGCAGCGCGTCCTGATCCAGCAGCACGAAGACGCCAGGGAGCTGAAGGAGAACCTGGACCGCCGGGAAGGCATCGTCTTCGACATCCTGGTCAGCTACCTGGGCCCCGAGAGCCTGGCGGACTACGAGCACTTCGTCAAGATGAAGTCGGCGCTCATCATCGAACAGCGCGAGCTGGAAGACAAAATACACCTGGGTGAGGAGCAGCTGAAGTGCCTCTTGGACAGCCTGCAGCCCGAGAGAGGCAAATGAGGGTGCACCCACCCCCCACCCCACCCGGCCCTCCCTGGAGGAGGAGGAGGATGCAGATGGGATTGGCGGAGTCATCAGCTCTGGTCCTGCGGATGCAGCTGAAAACCGCAGCCTGTATTTATGTCCTGTTGATGGGGGTCGGGGGGTGGGGGGGTGTCCTCTCACGGCCAGGTGGCGGTCAGCAAAGCAATAACTTCCATGTGTGTGTTTGGGATGAGTTCTTTAATTCTTCGGTTCCCTTTTGGAATGCTGAGCAGAGCGGCTCCCCCCACCCCTTCTCCGTGGTGGCCTGGAAGCGTCCCCACGTGGCGCGGGGGCTCGGGTGCGCCGTGCGCGCCTGCGCAACAGGGTCACCACGTGGCCTATGCCGGCAGTGCGTGCGGGCACTGAACCGCGTCCTCCGCGCAGGAAGAAATGAGTGTGTCTCTAAGAAGGTGCATGTGGGTTGAGGGTGGGGGGAGGTTCGCCTGGTGCACGAGCTGTCCTGTGGATCACGGGAGGCGCCGGAAGTGTTGCGCCTTTGGTTGTCTGTCCTGTAAGGATGACCCCTGACCCAGCAAAATAATGAGGATGAGCATTATTTATTAATGTGTTAGAAAGGAGAATAGTTGTCCATGCGGTTTAAAGACCAGCTGTGAAATGAGCTTTCAGCACGCTAGGTTCACTCATGGTGAAATCGCCACTTGCACAGTGTGCATGCTTTAAGGAAGGCGCACGCAGAAGGGACATACCGGCTTTTGTTCTTCTGGGATGGCACCCGTGTGCAAATGGTATTTCTCCTGCAAAGTGAGATTACCTGGCTGAAAGTGTCCGGAGGGTATGTGCTTGCAACGTTTTTGTTTTTTTTTTTCCCCTTAAGGCCCCTGAGATATTTTCCTCATTTACTTTCCCCTCCGCACCCCCCCCCACAGAACATTTCTTTGTGTCCTGATTGTATTTCTGTGTCTATATGATTGTGGATTATAATTGGCAGCTCCTCTCTTGTTTCTTCTCTGGATTAGTTATGGCAGTGTCAAGGCCACATTTCCTCTAAGAACCCATGGTTCTGGCTTTCCAGAGGTCCCAGTGGGCCACACAACTCCCAGACCTGGTCTTTATCTGCCACAGAGTTGACCACTGTCTGTTCCCTGTTTTATCATTTGATATTGCAAGGTGGTCAAGAGAGTCTGTTCACTAAAGAAAACACTGGCGAGCTGTTGTTTTCCAGTGCCCGAGTCATGACTAGGAGAAGATAACTTGCAGATCCCGTGTGCTGCATTTGCATCCAGAATGTATAAAGATCTTTCCAAGTTAACAGTATGAAAACAGACAGCCCAGTTAAAACATGAGCCAGAGACTTAAATAGACACTTCACCAAAGAGGCTATATGCATGTCAGTAGGCCGCATAGGTGTTCAGCCTCTTGTGGCTTGGTTCTCACGGTCTGATTTTTAACCTGGTCATCTGTGTTCCGTGCCAGTTGGGTGAGATCCTGCATAATGGCGGGAGAAGCCCCAAGATAACTTCATGTTGGGGTGATAGTCAGAGATCAGATCACGTTACTCCTTGTTTCCTCTTATGCCTGTGAAAGGAGTTTTTCGACAGGTAGAAAGATAGCCCTTTGTCACCAGTGGCCGGCACCTTACCAAAGACAGAAGGACATAATGTCTTATTAAAGGACACTACTCCACACCCACGGAGCCAGAAGGACAAGCTGGACCGGCCGTGGTGATATCTCTGCAGCCCTGGGGGGAACCGACCTAGCAGGCTTCAGTGATGCTGGCAGTAAACATTCCTTGGCAGCCCACCCACGCCAAAGAAAAAGGCCTTTTTCTGCACTTTTTATTCTTCTTAAATTAAGCTGTTCCTGATTTGAAAAGACCCTCTTCTGCCAGTGAAGCATCGTCGTCCTCCTCATACGCTATGGTCACTTGCTGTGAAAATGGGTCATGGCAGAAAAGATAAAGCTGGCTGTCCATGGACCGCCCCCCTCCACCACCTTCCTCCCTTGGGGAGATAACCACAGTGATGTCAGTGTGTTTTGGTTTTCACAAAGCTTTCATCTGTGATTCTTGCCCTTGTCATACAGTATTGTGATCATTTTGATGATACATCTGTAAAATGTGAAAATAGAGTTTTTGCCTGTATCCAGCCTTTCAGTGTCTTTTGAGAACGTTGTCTTCTACATAGCAATACACAGGGCACTGGTGTCCTTTAAACGAAGCCCATAGAATCACAATGGTCCTGTCTATTTCCCCATCTGCCTCATAAATGTCTGGTGGTGGGGACATAGAGATTAGTGAGTCAGTGTGCACAACTTTGTGTATAGCTATATTACAGCATATGCAAACAATCTGGTGCTAATGTTTCTCCCATGGCATTCCTGGGTGGTGGCTGATGGCTCACCCCGGGTCATTGCTCAGCTGAGAAGTGCTCTCTGTATCTCGAGGTTGCAGTCAGGGGCCTTGCCGGAGACTTTGATCATGCCGCCCACCATGGAAGATGTGTACCAATTTCATGCTCAACACTTAACACTTACCTCTCAACAGATCATCCTGCTTGACCTTAATACAATAAATGGTGTCTTTCAGTGAATGGAGC EMBV3_16003 CCTGGTCAGGAAACAAATGGGTCATATGGGCTAGCTGTAAGACAGCAGGAGATAGAAGAG Gene GeneID:507530|C14orf44:NM_001024491:61_cdna Constitutive 1 NULL GeneID:507530 10 GENE C14orf44 NULL chromosome 14 open reading frame 44 EMBV3_12514 ATACTAGTCTACTGAAGGGCAAGGGCAGTGGGACTGGATTGGAGATGATAAGGTGTGAGC Gene BVV0102_211511 + 0 NULL GK000030.2:96160461-96218219 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00247731 TCONS_00247734 TCONS_00247732 TCONS_00247735 TCONS_00247733 1 XLOC_151414 Coding TCONS_00247735 XLOC_151414 Coding Coding SMC1A X:96212393-96252915 = TSS185450 9636 1 TCONS_00247735_7 1210 0.225716064757161 25 0.762814343180079 8.46169695808072e-05 2.20727422753599e-05 3.35938802964861e-05 1.8601322447573e-16 2.43570569727912e-05 5.36100452157934e-05 1.26745550464863e-08 2.95147354227131e-08 0.000191283805956219 0.000917316267519552 3.65231285959492e-06 7.37195747355787e-05 8.62005652323554e-11 4.55048419157117e-06 1.1836446259084e-22 0.0149058882942016 0.0064734579896347 0.00693211375962587 1.25167823956913e-08 1.93037396703547e-13 1.54966986754504e-25 0.00662608297059491 0.00517429655914859 0.00383144260570261 8.3048787081121e-09 8.63681550162365e-05 9.57787809985348e-08 0.000698451548844765 0.00111072360651111 0.00171903850087887 NM_174614.1 SMC1A Bos taurus structural maintenance of chromosomes 1A (SMC1A), mRNA. 0.0 6666 99.95 0.383976753839768 NM_006306.3 SMC1A Homo sapiens structural maintenance of chromosomes 1A (SMC1A), 0.0 7723 86.66 0.658260689082607 TCONS_00247735_7 sp|O97593|SMC1A_BOVIN SMC1A_BOVIN Structural maintenance of chromosomes protein 1A; 0.0 2286 99.74 0.937190082644628 3 coding 1 1 1 1 0.0424062497316496 0.762594963020358 0.00562893254234062 0.909531729606252 CGAGGTTTGCTGTCCGCCCGGCCTGCACTGCGGTGTTTCCCGCGCGGGCTATCCCAGTTGGCGGGCGAACGGCGCGGCCTTTCTTAGCGCCGGCGGCGCTGCCGCAGTCATGGGGTTCCTGAAGCTGATTGAGATCGAGAACTTTAAATCGTACAAGGGTCGGCAGATTATCGGACCATTTCAGAGATTCACCGCCATCATTGGACCCAATGGCTCTGGTAAGTCAAATCTCATGGATGCCATCAGCTTTGTGTTGGGTGAGAAAACCAGCAACCTGCGGGTAAAGACCCTAAGGGACCTGATCCACGGAGCTCCTGTGGGCAAACCAGCAGCCAACCGAGCCTTTGTCAGCATGGTCTACTCTGAAGAGGGTGCTGAGGACCGCACGTTTGCCCGTGTCATTGTTGGAGGTTCCTCCGAGTACAAGATCAACAACAAAGTGGTCCAGCTACATGAGTACAGTGAGGAATTAGAGAAGTTGGGCATACTTATCAAAGCTCGTAACTTCCTCGTCTTCCAGGGTGCTGTGGAATCTATTGCCATGAAGAACCCCAAAGAGAGGACAGCTCTTTTTGAAGAGATCAGTCGCTCTGGGGAGCTGGCCCAGGAATATGACAAGCGAAAAAAGGAAATGGTAAAAGCTGAAGAGGACACACAGTTTAATTACCATCGCAAAAAAAACATTGCAGCTGAACGCAAGGAGGCCAAACAAGAAAAAGAAGAGGCTGACCGCTACCAGCGCCTGAAGGATGAGGTGGTGCGAGCTCAGGTACAGTTGCAGCTTTTCAAACTTTATCATAACGAAGTGGAAATTGAGAAGCTCAACAAAGAACTGGCCTCTAAGAACAAGGAGATAGAGAAGGACAAAAAGCGGATGGACAAGGTAGAGGATGAGCTGAAGGAGAAGAAGAAGGAGCTGGGCAAAATGATGCGGGAACAACAGCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAGAGCTGAACCAGAAGCGGCCTCAGTACATCAAGGCCAAGGAAAATACTTCCCACAAAATCAAGAAGTTGGAAGCAGCCAAAAAGTCACTACAGAATGCTCAGAAGCATTATAAGAAGCGTAAAGGTGACATGGATGAGCTGGAAAAGGAGATGCTGTCAGTGGAGAAAGCTCGGCAGGAGTTTGAGGAACGGATGGAAGAGGAAAGTCAGAGTCAGGGCAGAGATTTGACCTTGGAGGAGAATCAGGTGAAGAAATATCACCGGTTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACCCTGGCCCAGGAGCTGGAGAAGTTCAATCGAGACCAGAAGGCTGACCAGGACCGGCTGGATCTGGAAGAACGGAAGAAAGTAGAGACAGAGGCCAAGATCAAGCAAAAGCTGCGGGAGATTGAAGAGAATCAGAAACGGATTGAGAAACTAGAGGAATACATCACAACCAGCAAGCAGTCTCTAGAGGAACAGAAGAAACTAGAGGGGGAGCTGACAGAGGAGGTGGAGATGGCCAAGCGGCGTATTGATGAGATTAATAAGGAGCTGAACCAGGTAATGGAGCAGCTGGGGGATGCCCGCATCGATCGCCAGGAGAGCAGCCGCCAACAGCGAAAGGCAGAAATTATGGAAAGCATCAAGCGCCTGTACCCTGGTTCTGTGTACGGCCGCCTCATTGACCTCTGCCAGCCCACACAAAAGAAGTATCAGATTGCAGTAACCAAGGTTTTGGGCAAGAACATGGATGCTATTATTGTGGACTCAGAGAAGACAGGCCGGGACTGCATTCAGTATATCAAGGAGCAGCGTGGGGAGCCTGAGACCTTCTTGCCTCTTGATTACCTGGAGGTAAAACCTACAGATGAGAAACTCCGGGAGCTGAAGGGGGCAAAGCTGGTGATTGATGTGATTCGCTATGAGCCACCTCACATCAAAAAGGCCCTGCAGTATGCTTGTGGCAATGCTCTTGTTTGTGACAATGTGGAGGATGCCCGCCGCATTGCCTTTGGAGGCCACCAGCGCCACAAGACAGTGGCACTGGATGGGACCCTGTTCCAGAAGTCAGGGGTGATCTCTGGCGGGGCCAGTGACCTGAAGGCCAAGGCCCGACGCTGGGATGAGAAAGCAGTAGACAAGTTGAAAGAGAAAAAGGAGCGGTTGACAGAAGAGCTGAAGGAGCAGATGAAGGCAAAGCGAAAAGAGGCAGAACTACGTCAGGTGCAGTCTCAGGCCCACGGACTGCAGATGCGGCTCAAGTACTCACAGAGTGACCTAGAACAGACCAAGACACGGCATCTGGCCCTTAATCTGCAGGAAAAGTCCAAGCTGGAGAGTGAGCTAGCCAACTTTGGGCCTCGAATCAATGATATCAAGAGGATCATCCAGAGCCGAGAGAGGGAAATGAAAGACTTAAAGGAGAAGATGAACCAGGTAGAGGATGAAGTATTTGAAGAGTTTTGTCGGGAGATTGGTGTGCGCAATATCCGGGAGTTTGAGGAAGAGAAGGTGAAGCGGCAGAATGAAATTGCCAAGAAGCGTTTGGAGTTTGAGAATCAGAAGACTCGTTTGGGTATCCAGTTGGATTTTGAAAAGAACCAACTGAAGGAGGACCAGGATAAAGTGCACATGTGGGAGCAGACAGTGAAAAAAGATGAAAATGAGATAGAAAAGCTCAAGAAGGAGGAGCAAAGACATATGAAGATCATAGATGAGACCATGGCCCAGCTACAAGACCTGAAGAACCAGCACCTGGCCAAGAAGTCAGAGGTGAATGACAAGAACCACGAGATGGAGGAGATTCGTAAGAAACTGGGGGGCGCCAACAAGGAAATGACCCATTTACAGAAGGAAGTGACAGCCATTGAGACCAAGCTTGAACAGAAGCGCAGTGACCGCCACAACCTGCTACAGGCCTGCAAGATGCAGGACATCAAGTTGCCACTGTCTAAGGGCACCATGGATGATATCAGTCAGGAAGAGGGTAGCTCCCAAGGGGAGGATTCAGTGAGTGGCTCCCAACGGACTTCCAATATCTATGCACGAGAGGCCCTCATCGAGATTGACTACGGCGACCTGTGTGAGGATCTGAAGGATGCCCAGGCTGAGGAGGAGATCAAGCAGGAGATGAACACGCTGCAGCAGAAGCTGAATGAGCAGCAGAGTGTGCTCCAGCGTATTGCTGCCCCCAACATGAAGGCCATGGAAAAGCTGGAAAGTGTCCGAGACAAGTTCCAAGAGACCTCAGACGAATTTGAGGCAGCCCGAAAGCGAGCCAAGAAGGCCAAGCAGGCATTTGAACAGATCAAGAAGGAACGCTTTGACCGCTTCAATGCCTGTTTTGAATCGGTGGCCACCAACATTGATGAGATCTACAAGGCCCTGTCTCGTAACAGCAGTGCTCAGGCGTTCCTGGGCCCTGAGAACCCTGAGGAGCCCTACTTGGATGGCATAAACTACAACTGTGTGGCTCCTGGCAAACGCTTCCGACCCATGGACAACTTGTCAGGGGGGAAAAAACAGTTGCAGCTCTGGCCCTGCTCTTTGCCATCCACAGCTACAAGCCAGCCCCTTTCTTCGTCCTGGATGAGATCGATGCTGCCCTGGATAACACCAACATTGGCAAGGTGGCAAATTACATCAAGGAGCAGTCAACTTGCAACTTCCAGGCCATCGTCATTTCTCTCAAGGAGGAGTTCTACACCAAGGCTGAGAGCCTCATTGGAGTCTACCCTGAGCAAGGGGACTGTGTGATCAGCAAAGTCCTGACCTTCGACCTCACCAAGTACCCAGATGCCAACCCCAACCCCAATGAGCAGTAGCAGTAGTTCTGCCCTCCTACCCAGTCTGGATCCTTAAGCTGCCCCTCTCCCAATCTCTGGATATTTGGTTCCCAACCTTCCCCTACTTCCTGTCCCTGTTTGGTATAATCATGGGATTTAGGCACTGCTATCAAGCACGAAGAGGAACAGAGGTGATGTTAGTTCTGGAGCAAAAATTCCTGAGCTTCAGGGAGCATCCTGGCCTCTGGAAGGAGGTGCTGAGCTGAGCTGAACTGAGCTGAACAGGGCCATCTGTCCATCCCCTTTCCTCCCTTTCAGACCTTCTCCCATCATCCATAATCATGGGTTCTTTGGGCCCCCTTGCATTTTGCTTGTGTGTGGGTATGTATGTGTGTGTATATATGTCCACATGTGCGTATGTGGGTGTGCTTGCAAAATAATACAGATATTAGAGACCCATTTTAGAAGGAGCCTAGGCTGAATTTGATTCCAAGAGAGCTTAGTATGACAGCACCCTGGAGCTGGGCAGAAGTATTCCGGACCTCATAGGATTCAGGCAGTTACGTGAAACTGCCCTCATTCATGTTTTCATTCATTTTGTGTGTTCATCAGACACATACTGAACACCTGTTTGTCAGACTCTATGCTAGGAATACAGAACTGAGTCAGACATGATCTCTACCCTCCTACTAGGAAGATGCTAGTTCATGAGTTCCCATGGTTAGCTGAATCAGGTATAGGTGCTTTGAATTTGAAAAGAGGACGATCACCTCCAGGCCTTCCGGAGGTCACTTTTGAGCTGGACCTTAAGTTGGTAGGATTTGGTTGGGTACTAGGAGCAGAGTCTGGGCTCTGAGGACAGTTCTAGTCCCATTTTTTATTACTTTCTAGTTTGGCGCTGGGCAAGTCATTTGACCTTTCTGTGCCTCAGTTTCCTCATTTATAAAATGGGGCTAACAGTATTTACCTACCTCATAGGATTTAATGATGTCAAACTCCTCACTGGAGGCCTTATCCTTGCTTAGAGTCCAGTAGGTGCCAACACCTCAGAATACAAGTCTTCACATGCCTAACGCCTGAGGGCTTCTGATCCCAATTGTTAAGGACAGAAGGAGCCTCCAGATTTGGGAGATGGTGAATGTTCTGGTTATTGGAGAAGTTCCAGGGCATTTATGGGGTTTACCTGGTAAATGGAGGGCACAAGGAACCCTATAGCTTAAATCATGTATAACTGAGTGCCTAGATCTCAACCTGGGTTGTTAGGAGGTAGGGGAGAGGTAGCCTGGGCCACATCCTGGCTGAATGCATGCGATGTTCCTTTTGGGAAATAACTGTTAGTTGCAGAGGCAGCTCAGTGTGCTGCCAGGAGATCAGTCTTTGCTTCTTCACATATACCATCAGACCATCACCTTGTCCTCATCTATATACTACATTTTTGTTTTTTAAAGGTTTAATCAATTGTAATTACCCAAGTAATGAGTGAATTTTCTTTTTAAGAAATTAGATTGTTACAAATAATAGTAGTCATTCAACTACCATTCTCCCATCGCATCTTAATTGCTGTAATGTCTGTTGTACATCCATCTTAACTTTAAGACTTACATGTGAATTCATTGAATATATTGTGTTTAATGCAGATGATATATTGACTCATTCTGCAGTTTTCTTTCTTTGCTTAGCTATATTTTTGAGATCTATGCATGTTGCTAAATGTAGAAGCAGTTCATCCTTTGTAATTGTTAGGTAGATTGCCATTATGTGACTCTACCACATTTTATTTACCCATTTCTCATGTGATAGACTGTTTTCTGTTTTTGCTTTTATAGGATGCTAAGCAGGAGCATTTGTGTGTGTGTGAAAACTTACCTAGGGTAGATTCCTAGAAATTGAATTGCAGAGTCATAGGCTATGTATACTTTTGTTTTTAATAGATAATTCCAAATTGCCCTCCCGTACTATTTACCCAGTATTTTTCTTGAGGTTGTCTTAGGTCTAATATTGTTATCTACTTTAGTTTCATCCTAAGTAGCGATAACCATGAAACAATGGGTTTGATGTGCTAAGTATGTATTTTCTAATACATATTAAAAGGGACATCAAGACAAAATAAATGTTTGTGTTCAACCAAAGAAATCACATACCACTTGTGGTGTGTGTGCCATAATTTGGGAAATGCTGGCATATGTGGAAAAGCACAATTTGGGAGTCACCCTGATTCAAATCCTAGCTGCAGAAACCTGAGCCTGTTATTTCACCTCCCTGAGTCTCGGTTTCCTCACGAAGGAAAGGAGATAATATACACCTACCTTGCAACCATGTAAGGAAGATGAAATATATCTAAAGCAATTTGGCTAACATCTAGATCATCACAGGCTTTTAAAGGTAGTAATTGCTATTCTTCCCACTTTACAGATAAGCAGACTGAGGCCCAGGAAGGTGAAGTAACCCACCTACCAGGTAGCAGTGAAGGTTTGAACCCAGGCCCTCCATCGGTCTTGTGTTTTCTCCATTGTGAGGGTGGTTATCAACCTTGGCTGTTCACTGGAATCACCTGTGAAGCTTTTTCTTTTTCTTTTTTTTTTTTCTGTCTGCACTGTGTGGCTTGCAGGATCTCAGTTCCCCAACCAGGGATTGAACCTGGGCTGTGGTAGTGAAAGCCCAGAATCTTGACCATTAGGCCACCAGTGAACTCCCTCTTTTTCCTTTTTAAGAATCAAAGCAATATATACACCAGTTAGAAAATAAAATATTACAGAAGGGCTTATAATGAAAAGCAGCAGTTCCTTGCTGCACTCCCGTGTCCAAAGGATGTGGAGCTCCTTGCTCTGGTCCCACGCCTGGAAATCTAACTCAGTAGGTGTGGATGATAATCTGGGTAACTAATCCCTACCTCATGAGGTAGAAAGCATTACATAAATTGTCTCAGGCTAAGGCCCTGGCACATAGGAACAAAAGTGCTACAAAGGATTTAAATCCTGAGGCTCAGAGAGGTGAGATGACTTGTCTTGAGATCCCAGTGGTTCCGTTGCAGAGCCTAAACTTCAACTAGGATCTCCTCTGTTTGCCCAGTACTTTCTCTTGTGTCACACTGCCTCCTAGCCAGCTGGACCTGAGTGAAATCCCTAGGGCTAGTTGGGGGACACTAGGTTGACTCCCTTATGTTCTGGACCTAGTAGCCTTAGTCTGGGGACCCAAACATGAACCAAATCTTTATCCTGTCCTTGAGGAGCTCAGTGTCTAGTTGGGGAGGCAATTCATAAACCAATGTGATCAGCGCTATGACAGGAGCATGGATATAGGAAGGGCATCTAGCTTAGGTAGAGGTTCAGGGAAGACATTCTCTAGTCTAGGACGTGAAACCTGAGCTGAGTCTCGAAGCACTGGTAGGAATTAGCCAGTTGAGGAGTTGGAAGGGATTTGCAGGTAGTGGGAACAGTATGCACAAGACCTGCGGTCAAGAAACAGCCCACCAGTTCAGAAATACTGAGCCATAAGGTTTCCTGGGCTGGGGAAAAGTAGCAGGAAGTGAAGCTGGAGAGGTAGTCAGGAACCAGATTTGAAGAGAGTCGTAAGAGCCTGGCTATAGAACAGATTTACCTCTCAGAACAGTTTGGTTCCCTAACTGGCTGTATACCAGAAACACATGGTGCATCCTGGATGACACCCTCCACCACCACCACCTAAAAATTCAGTTTTCATAACTGGGTGGGGGCCTCAGCATCTGGAGAGCTTATAAATGTGAGGATGTAACTAGGGTGCAGCCAGGTTTGGGAACTGTGGGTTGGAGACAGCAGAGGAGACTAGATAAGAAACAAACCCCTTTCTGGCTGGCCAGTGTGGAAGCAGATTAGGTTAGATGCTCAAACTTTATGCTCCCTTAGTTTCCCAGTTCAATTCTCACAGTTTTATATTTGCCTATTTTATCTCTCCAAATAAGCTATAAGCCCCACAGGGGTGGGTGTGGGACTATCTTGCTACTAGTATACACCCAGCAAAAAGCACAGTACCTGACCCCAAATACGCATCCAAAAAATAGTTTTTCAATGAATGAATGCATGTGTGAAGGAGAAAATGGAGACATATTAGTTAGGGAACTTGAAAATACTAGTCTACTGAAGGGCAAGGGCAGTGGGACTGGATTGGAGATGATAAGGTGTGAGCCATTAAAGGAAGAGATGAAGCAGACTTGGTGACTGATTATTGGATGTGAAGTGTGACTGGGAGGATAGAATGAATGCTGGTTAATAGCCAAGATTCCTACTCTGTCCCAATCATTCTCCTTCATCATCCATCTGAATCAGAATCTCCTTCCAGCCTCCTCAGCAATTGAAATTCCTCAAGTTAAGTAAACATTGTCTGTGTGCTGTGTGGTCTCCCCCTCCTCCCCAGCCATTGATTCATTCATTGAGTTCAATAAATCTTGGCTAAGCACCTCCTGTGCCCTTCCAAGGTGGGACTCTTGACTCCCTCTTTCCTACCTCAGATGTTTTTGAGGGCTTCCCCAGATAAGACTTACGTCCCTTATACAGTAACCTAAAGGGAGATACTCAAACATCAGACCTGTAAGGGAACCTACAGACTTCGTCCAGTCCCCTCCTGAGGCTCTCAGTGGGGAAGAAACTTGCCTAAGGCCCCACTACTAGGAAATGTAGGAGCCAGAACTGGAGCCTAAGTTCCCTTTCCACATTGCCCCTAGAGCCTTGATTTCTCCCATTGCAGATCAGAACAGGCAGAACAGGCCAAGGAGAAGGTTGGCCTTTGAAAGTCACTGGTACTGGACAGGCGAACAAGAAGCTTGCCAGTTACACTGCTCCCTTTTGGAAGCCCTCAGCAGACCTGCCATGCCCACAGTCCCTTTTAAGGGATTAAGCATGAGTTGCCATGCTCTGTACCATGTGACCTCACAATCCTGGCCACAGATGACAAAGTTGGGATAGTATCTTACTCATGGACAGCCAGTCTCTAAGCTGGACGATGGTTCTATTAGGTAGACTGATGTAAGAACTCTATCTCCTAGCCATGGCCTGTATGAGATGGTAAATGTATGAAACAATCAGATCCTTTTTCAGAGAGGCTGAATGTGAGGCATTCAGAAGAAGTGGACAATTAGAATTTAGCAAGGCAGATGTGGATGAGGGATGTCAGAAACTGAATAGCAAAAACAAGGAGAAAGCTGCAAAAACCATGAGGCATGTGAGAATGTGGGGCCACAGGTAGCAGAAGCCATGAAGCAGCAAGACAATGGGCCAAAAGGACACAGAAGCCATGAAGCAATAGGAGCCACGATGTAGCAGTAGCCTAGAGGAACAGAAACCATGAGACAAAACCCTGAATCTGTGAGATCCACGAAGCAGCAGAAGGCTTGAACAGACAAGATCCATGTGGCAGCAGAAGAAATGAGACTGCAAGAGCCCCAAGGTAGCTGCAACCGTGTGGCAGTGAGGCAGCAAGAATCAAAGAGGCAGCAGGATAGACCAGGCAAGCAGAAGTTACAGCACAGAGAAGCCCCCGATTAATTGGAGCTGAAGCCCCAGAAGCCAGGAAGCTGCAGGAGCCAGGAGGCCCAGAAGCTGTGCCCCGAAGGCCACTGGCTGGCGTGGAGGGGAGCAGAGAGAAGGTAGTCAGTAGCAGTAGGAGGAGTATAAACACTGCCAGAAAGAAGTTGAGTCACCATTTTGAGAAGCACTAGAGAAGGGAGCAACAGATGCCTGCAGCTGAGGGGGTGACAAGATAAGCCAGGCTCTAGCGCTGCTTTGGATCATAAACCATTTTCAAGTTTCTGTTCTGTGAGGCTGCCTATGTAGCTGTTTTTGTCTTCCTTATTTCCCTGTGAATGCTTCAATAAATCTCCATCACTAAGCTGAG EMBV3_30694 TGTAACTTCCGAGGTGCCCTTTTCCAAAAGATTAATCAAGATGAAGAAGAGGAGGAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26868 TGGCCTTCATTTTTAGCACAGGACACCCAGACCCTTCGACCCACCTTTACTCCCATCCAT Gene GeneID:527321|KLHDC8B:NM_001035370:217_cdna Constitutive 2 NULL GeneID:527321 22 GENE KLHDC8B MGC142469 kelch domain containing 8B EMBV3_17023 AACAGTACATCTACAAAAGGAAAAGTGATGCGAGCTGTGCTGAAGTTTGCTGCTGCCACT Variant GeneID:281898|RPSA:NM_174379:20_cdna 162^280 2 EMBV3_00068 GeneID:281898 22 GENE RPSA LAMR1 ribosomal protein SA EMBV3_22666 CGCTGCGTTGTTTTTTCTATGATGCTCTGTCAGGGGGAAAACTGACTCTTGGCGTTAGCG Gene GeneID:535053|LOC535053:XM_002697729:64_cdna Constitutive 0 NULL GeneID:535053 24 GENE LOC535053 NULL similar to KIAA1772 EMBV3_30195 AGAAGCTGCTGAAACTCACGATGATGCTATCTTTAGTGACCTCCCCGGTGACCCCAGTGA Gene GeneID:534082|ADAMTS3:XM_002688347:131_cdna Constitutive 0 NULL GeneID:534082 6 GENE ADAMTS3 NULL ADAM metallopeptidase with thrombospondin type 1 motif, 3 EMBV3_32508 GAACAGATACATTGGAATTTTAGAAAACTTTAGTACTACCATGATTTAATCCAGATCCGG Gene GeneID:525154|SC5DL:NM_001035356:140_cdna Constitutive 0 NULL GeneID:525154 15 GENE SC5DL MGC127185 sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like EMBV3_37788 CAGAATTTCTTCCTGCTCTTTCAATAATTTCTACACCAGTAGCAGCTGCGGCCTCCGTGC Gene GeneID:100336055|LOC100336055:XM_002697788:370_cdna Constitutive 0 NULL GeneID:100336055 24 GENE LOC100336055 NULL hypothetical protein LOC100336055 EMBV3_18423 TATGATGGCTACATTAGCTTCCCCATGCGGCAGGAGAGACAAACAGCAGCGCCTACTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14920 CAGAACTTCCGCTTTCGCCATCAGCACGCGCCCCACCCCGTACCCGGCTGTCGCGGTCTC Gene GeneID:100337187|LOC100337187:XM_002697850:592_cdna Constitutive 0 NULL GeneID:100337187 24 GENE LOC100337187 NULL hypothetical protein LOC100337187 EMBV3_34786 CAAGACTTAGTGTCCTAACCCTCGTGCTGGCTGTGAATGTCAACGGACCAATCTCCCATG Gene GeneID:538513|SYT3:XM_002695132:651_cdna Constitutive 0 NULL GeneID:538513 18 GENE SYT3 NULL synaptotagmin III EMBV3_33950 CAGAGTTGTGTACGGTCCAGTCGGTCAGTCGTGTCGGACTCCTTGCATCCTCATGGACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01436 GGCCTGCCCCTTTGTCTCAGAAGACGGATTTATTAAGAACACGTACCTCCGGCAGACTCT Gene GeneID:507837|BAIAP2:NM_001017937:57_cdna Constitutive 0 NULL GeneID:507837 19 GENE BAIAP2 MGC133900 BAI1-associated protein 2 EMBV3_14751 CACCCTGTCCCAGCATCTCCCTTCCTTCTCTGCTGTGTTCATCTGTTCCAAGATCTGTGT Gene GeneID:540204|KRT81:NM_001076206:51_cdna Constitutive 0 NULL GeneID:540204 5 GENE KRT81 MGC139968 keratin 81 EMBV3_00721 CACAGGATAGGGTGTCTTTGAGTAAGGGAGTAGCTGTGCTAAACACCTCAGTAGCCCCCA Gene GeneID:788009|LOC788009:XM_002687480:335_cdna Constitutive 0 NULL GeneID:788009 5 GENE LOC788009 NULL similar to olfactory receptor, family 6, subfamily C, member 1 EMBV3_35216 GAGAATGCTCTTCGGATCAAAAAGTCAGCACAGCGAGAGAAGCAGGGGTCCATCAGGGTG Gene BVT0102_204817 + 0 NULL GK000009.2:89315404-89552397 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19714 GTCATGGTAGAATCAGCCCAGACCACATGGATCTTCACTCTGCCCTTCTGTGGAACAGGA Gene GeneID:788413|LOC788413:XM_002687501:393_cdna Constitutive 0 NULL GeneID:788413 5 GENE LOC788413 NULL similar to olfactory receptor 247 EMBV3_13831 ATGACTCTATTACTTAAGAGCACTGGAGATTAAGGAGACGGGGTCCTTGGCAGGGCTAGG Gene BVV0102_082861 + 0 NULL GK000026.2:24403160-24412844 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151955 TCONS_00151952 TCONS_00151951 TCONS_00151954 TCONS_00151956 TCONS_00151953 1 XLOC_092229 Coding TCONS_00151954 XLOC_092229 Coding Coding SH3PXD2A 26:24405798-24653102 j TSS113455 10786 1 TCONS_00151954_5 625 13 0.95643805372357 0.000125124290018806 0.000140829853104264 1.64379255489317e-08 0.000237728169803613 0.000503349955559784 4.81448327203973e-05 5.27566458669841e-05 9.73932368857103e-05 0.000211536956973069 0.000124714628583106 0.000529589563491774 8.70649517258855e-05 1.02469232965462e-11 7.37384520347146e-05 2.35599952448458e-09 0.00163349200859133 0.000736665939922247 0.000238761145564188 0.000123026560111364 0.000467002290210548 3.2568572190441e-05 0.000142931427311614 0.000542772272887011 0.000187222830898698 0.000616547900490783 1.33622775404172e-07 0.000135853868816467 0.000282305198527899 2.23846303563637e-05 3.89794306334056e-05 XM_003587875.2 SH3PXD2A PREDICTED: Bos taurus SH3 and PX domains 2A (SH3PXD2A), mRNA. 0.0 1.935e+04 99.57 0.999629148896718 NM_014631.2 SH3PXD2A Homo sapiens SH3 and PX domains 2A (SH3PXD2A), mRNA. 0.0 9084 78.12 0.999165585017615 TCONS_00151954_5 sp|Q5TCZ1|SPD2A_HUMAN SPD2A_HUMAN SH3 and PX domain-containing protein 2A; 0.0 1101 88.68 0.9472 5 coding 1 1 1 1 -0.117489995702444 0.468590398787031 0.038678586842104 0.596764754360642 GGCAGCGGCGCGCCGGCCCGAGGTAGCTGGGGAGACCCGGGAACCCGGGAAGCGGGACAAGGAGCCGGGGCCGGACCGGGATGAGAAGGTGACGCCGCCGGGGGGCGCCACTCGCTTTGTGGGGGAAGATGCTCGCCTACTGCGTGCAAGATGCCACCGTGGTGGACGTGGAGAAACGGAGGAACCCCTCCAAGCACTATGTATACATCATCAACGTGACCTGGTCCGACTCCACATCCCAGACCATCTACCGGAGGTACAGCAAGTTCTTTGACCTGCAGATGCAGCTTTTGGATAAGTTTCCCATCGAAGGTGGCCAGAAGGACCCCAAGCAGAGAATCATCCCCTTCCTCCCAGGCAAAATCCTCTTCCGGAGGAGCCACATCCGGGATGTAGCTGTGAAGAGGCTGAAACCCATCGATGAGTACTGCCGGGCCCTTGTCCGGCTACCGCCCCATATTTCACAGTGTGATGAAGTCTTTCGGTTCTTTGAGGCCCGACCAGAGGACGTCAACCCCCCAAAAGAAGACTACGGCAGTTCCAAGAGGAAATCAGGTGCCGACACCAACGCCGAACCCATGATCCTGGAACAGTACGTGGTGGTGTCCAACTATAAGAAGCAGGAGAACTCGGAGCTGAGCCTCCAGGCCGGGGAGGTGGTGGATGTCATCGAGAAGAACGAGAGCGGCTGGTGGTTCGTGAGCACCTCTGAGGAGCAGGGCTGGGTCCCTGCCACCTACCTGGAGGCCCAGAATGGTACTCGGGACGACTCAGATATCAACACCTCCAAGACTGGAGAAGAGGAGAAGTACGTCACCGTGCAGCCTTACGCCAGCCAAAGCAAGGACGAGATTGGCTTTGAGAAGGGAGTCACCGTGGAGGTGATCCGGAAGAATTTGGAAGGCTGGTGGTACATCAGATACCTGGGCAAAGAGGGCTGGGCGCCAGCATCCTACCTGAAGAAAGCCAAGGACGAGCTGCCAGCACGGAAGAAGAATCTGGCAGGCCCAGTGGAGATCATTGGGAACATCATGGAGATCAGCAACTTGCTGAACAAGAAGGCGTCCGGGGACAAGGAGACCCCCCCGGCCGAAGGCGAGGGCCTGGAGCCCCCCATCACCAAGAAGGAGATCAGCCTGCCCATCCTCTGCAACGCCTCCAATGGCAGCGCGCTGGGCATCCCCGAGAGGACCGTCTCCAAGCTGGCCCAGGGCTCCCCAGCCGTGGCCAGGATTGCCCCTCAGAGGGCCCAGATCAGCTCCCCGAACCTGAGGACAAGGCCTCCTCCTCGCAGAGAGTCCAGCCTGGGATTCCAGCTGCCGAAGCCGCCAGAGCCCCCTTCTGTTGAGGTGGAGTACTACACGATTGCTGAATTCCAGTCGTGCATTTCAGATGGGATCAGCTTTCGAGGTGGACAGAAGGCAGAGGTCATCGACAAGAACTCAGGTGGCTGGTGGTATGTGCAGATTGGTGAGAAGGAGGGCTGGGCCCCTGCATCCTACATCGATAAGCGCAAGAAGCCCAACCTGAGCCGCCGCACGAGCACTCTGACACGGCCCAAGGTGCCCCCGCCGGCACCACCCAGCAAGCCCAAGGAGGCCGACGAGGGTCCAGCCGGCCCCGGCGAGAGCCAGGACTCCCCTCTGAGGCTCAAGTACGAGGAGCCTGAGTACGACATCCCTGCCTTTGGCTTCGACTCAGAGCCGGAGCTGACCGAAGAGCCCACAGAGGACGGTGGCTCGGGGGACAGGCGGCCCACACAGCCCCACAGGCCCTCGCCGGCCTCCTCGCTGCAGCGCGCCCGCTTCAAGGTGGGCGGATCCACAGAGGACGTGGCCCTGGAGGAGGAGACCATCTACGAGAACGAGGGCTTCCGGCCGTGTGTAGAGGACGGCCTGTCGGCCAGACGCTCCTCCCGAGACAGCGACTCCCCAGGGGGCTCCCCGCTGTCCCTTGCCAGGAAAATTCCCCCAAATCGGACTCCCCCAAATCATCCTCACTTCTGAGCTCAAGGCGGAGAAGAACGCCCAGGCGGAACTGGGGAAGAACCACTCCTCAGCCTCCTTTTCCTCGTCCATCACCATCAACACCACCTGCTCCTCCTCCTCCTCCTCTTCCTCCTCATCCTTGTCCAAGAACAGCGGGGACCTGAAGCCCCGTTCCGCCTCGGACGCGGGCATCCGTGGCACTCCCAAGGTCGGGGCGAAGAAGGATGCCGACCCGAAGGTTGGGCTGACCTCCTGTGCCCGGGCCAAGCCGTCGGTTCGGCCCAAGCCGTTCCTGAACCGCGCAGAGTCCCAGAGTCAAGAGAAGATGGACATCAGCACTTTACGGCGCCAGCTGAGGCCCACTGGCCAGCTCCGGGGCGGCCTCAAGGGCTCCAAGAGCGAGGATTCTGAGCTACCCCCCCAGACGGCCTTCGAGGGTCCCAGCGAGGGGTCCAGGAGAGGCTCCGCCGACCTCATCACCCTCCCTGCTGCCTCGCCCCCCTGTCCCACCAAGAAGGGTCGGGAAGGGCAGGCCACCTCCTACACCACATGCAGTGCCTACCAGAAGGTCCAGGACTCGGAGATCAGCTTCCCCGCGGGCGTGGAGGTACAGGTGCTTGAAAAGCTGGAGAGCGGCTGGTGGTACGTGAGGTTTGGGGAGCTGGAGGGCTGGGCCCCCGCCCACTATCTGGTGCTCGGCGAGAACGAGCCATCCGACCCGCCTGGCAAAGAGACAGACACAGTGGCCCCCAAGAGCAAGCAAAACGAGGGCAAGTCAGACAGCCTGGAAAAGATCGAGAAGCGCGTCCAAGCGCTCAACACCGTCAACCAGAGCAAGAGGGCCACGCCGCCCATCCCCTCCAAGCCGCCCGGGGGCTTCGTCAAGACCTCAGGCGCCGGGGCGGTGAAGATGAGGAACGGTGTGCGGCAGGTGGCCGTCAGGCCCCAGTCGGTGTTCGTGTCCCCGCCACCCAAGGACAGCAACCTGTCCTGCGCCCTGAGGAGGAACGAGTCGCTCACGGCCACCGACAACCTCCGAGGCGTCCGCCGGAACTCCTCTTTCAGCGCCGCCCGCTCGGCAGCCGCAGAGGCCAAGGGCCGCCTGGCTGAACGTGCTGCCAGCCAGGGCTCGGAGCCCCCCCTGCTGCCCACTCAGCGCAATGGCATCCCCGTGTCCCCCGTGCGCCCCAAGCCCATTGAGAAGTCCCAGTTCATCCACAACAACCTCAAAGATGTGTACGTCTCGATCGCAGACTATGAGGGGGACGACGAGACGGCGGGCTTCCAGGAGGGCGTGTCCATGGAGGTCCTGGAGAGGAACCCCAACGGCTGGTGGTACTGTCAGATCCTGGATGGGGTGAAGCCCTTCAAAGGCTGGGTACCCTCCAACTACCTGGAGAAAAAGAACTAAGGGGGGGAGTGGGTCCTTCCAGCCTTAGTGTGGGTGAGCGGGAATAAGACAAAAGGGAAAGGGGAAATGGGAGGGGGTGGGGAGGACAACATGAAACCTGCAGAATGTGTGACCTCGAAGACCCCAGCTAGAAGGTGGGGTCTGGCGGGGGCCCACATTGAGCAGGGAAAGGGAATGGGCAGGGGTGCCCTGGGCCTGGGATCAGGGGCGAGAAAGCTGAGCCTCAAGTGTGTACCTTGGGGACTTTGCTGATGGACTCGGCGCCATTTGGGACAGGCCGTGTGGGAAACCCAATTTGTGCCTTGGCTGCCAATCTGGAAAAGATGTGGTTGTAGGGGCCTCACGTGCCCTGCCCCTGCCTAGCCTGGTTTCAGTAGCTGTTAGCCTCCAGAGTGGCCCTTGTATCGTCCTAACCTGTATTTGTGAATTATCCTGGTTCCCAGGGTCCACCACCTGCCACGGGTGGGTGTAGTAGGAGACACCACTGGCCCTGGGGTTTGGAGACATCTCTTGTGAGCTCAGGCTGTCCCTGGGCTGGGCCTCCATCCATGTCTGCGGAAGAAAAGGCAGTTGCCCAGGTGCCAGCAAGGATCCCCTTTCTTAGCCGTCACTGCCGCTGGCCTTGGGAAGAGTGCCCACCTGCCCAGGGCATGCCGTGGAGGACCACCAGCTCCAGAGCTCACAGAGAGGGCGGGCGGGTGGAGGCATCGGTCTCATCAGTCTGCACAGACTTTCTTTTGGGTATTTCTGGGTGGGCAATTCCTTTGCATGTTTTGGGAGAGGTGTATTGCTTTGGGGCTTCTATGTCAGGCCTTGGGTTTTTGGCCTTATTTTGGGGTTGTTTGGGGGCCCAAGGGAAGTTAGCCTCATGGGACAGGATGGGGAGAAGGTGGCATTTCTGTCGTACTCTTGTGGGGAGGTTGGTTGGTTTGTGTTTTGCATTCTTCCTCTCCACAAGCTGAAGTCGCTTCATTTGGTTTCCACTGTGTGGACGGCACCAGCGCTGGCCAGAGGGATTTCAGGCGGGAGAAGCCTCAGCCCCGGACGTGGCGAAGCAAAGATGCTGCTCTCTCGGCAGGCAGGACCCTCCCCAGGGAGGAGGGTGGCGTTCAGGAGAGGAACAGCGTACATTCTCCGGCCCAGGCAGGGCCCAAAGCCTCACGTGTAGGCAGTGGAGAAGCAGCGGTCACCCCACCCTGGGCTGAGGGGACCCCACTGGGCAGACACCACCAGCCATCCGTGGCCTGCGAGCAGTGCCCGAGAAGACGAAGATCCCTGGGCCCGGAGCCAGCCCGGGCTTCCCCAGGGGCAGCGCCCCTGTGAAGCGAGAAGAGAGAACGTGAAGTCCCTCTCAACTCTGGGTGGTATCTTTCAGTCGACATTTCAGAGGCCACACTGGCTTCCCTGAGGACTCACTCTTTGCTGGGAGTAGATTTCCACACGTGCCTTTGATTGTGGACAAATCAGGCTCACAGCCACTGATTTAGCTGCCAGATCCTGGATTGAGGAGGAAAAGCCCTCCCTCCGCCCCTGTTCCCCACCCAGGCAGTGTATGTTGCTGGAAAAAACAGCACGGGACCCGTGACTCGTGCCCTCAGCCCCCAGCCACCCCCCCTCCCCCTTCCTCACCGTACACTGATGCCTGGCAGCTCTAGCAAACTGCTCCCGTTCTTTGTTGAAAGGGCCGTGGTGAGATTTTGCTTCCTTTTGTTTAAAATTAAAATTAGTTATTTTCTTCTGCTGGACAGTATTAAATAGAGCAGGATGTTGAGTTATCTGCTAGATTGCAGTACTAATGGTAGTGTTGTAGTGTCTTTATATTAATATTATTTGGACTTATTTGAACAATAATGATAAAGAAGTGGTTCATTATTTTTTAATTAATGCACTTTAATAAGGTGGAATGGAAAGAAACCCAGAGAGCAAAGTGCATTACTTAAAGATGCAGTATATACTTTTCTCATTTTTAAACAGCACATATTTATTAAAAGAAAAAAAGTAATTTATGATTATTTAAAATAAAATTTAAAAGTAGAGTGACTGTCGGGTTAAAGGACCTTCCACGTAGCTATCTTCCAGGGGGAGGGCTCAAGCGGCTTCACTCCTCAATGTCTGCACTGAGCCAGTTCAATGCCAGCCAGGCCAGGAAGGAGTGCAGGACCCATCTGCCAAGCACAGAGCATCTCAGTTGGACTGGAGCACAGTGCTCCCTAGAGCCTGCCTTTCCCTGCCCTTCCTCTTCCACTGTACTGCCCTGTGGGGCTCTCCTAGCCCTGCCAAGGACCCCGTCTCCTTAATCTCCAGTGCTCTTAAGTAATAGAGTCATTATAAGTGACCTTCAGGATCACTTCATGCCATACCCTCCTGTTAACTGCAGCCCAAAGACAGGAATTAGCTTTCCCAAATCACACAGTTGACAGCAGACCTTCCCACCCCCGTTAGAGTGTATAGTGTGGTCATCATGTTTACATTGTGACATCCAGCCCTAAGGATGGCTGGGGCTGCTCAGGCATCCAGGAAAAGTGGAGAGTGCTGCCACCTAGTGACAGCATATAGATTTGGGCAGTGAACAGGGATTGCCATGCCCCATCTTCACCCCTTGCCCCTCGCCATCACCCCGACTCTCAGCACAGCACAAACCCTGCAAACCCAAAGAGAATATTAATACTTGAAGCAAGAAGGGTGCATGCCAGTCCCTCTCAGTCATGGCCAGGGGATGCCAGGGCTTGCGCCCCTGGACTCCTAGCCCTGCCCAGGGCAAGAGGGCTTTTCCCTAGAGCTACTGAGCTGCTTTGTGATGTTGGAGGGTACTGCTGGCAGCAGGTAGAGGAGGGAAGGGGCCTGGGGCTCTGACCCATCTGGAGGAAAACCAGATCGGACTAAAAAAGGAAAAAAAAAGAAATCTCAGCAGTGTCCAAACCTAGTTTTCCATTAGTTGCGATTGAAAATGTGAAATAACGTTGTATTGCTGTATACTGCAACTTTAATCATAATGAGCCCTTCTGAGGTCATTATTGAGGTTTATATAATGCCTGAAGATGCATCCTTTGGTGCTTTTTTCTTTCAGTTTAAAGACTTTATTACAAGGGAAAAAGATGTCTTCATCTCTCTCCCACTTTGTAACAGGGGCCTGGCTGGGGTCTCTGGCAGCCATCATGCTATTCCCACTAGGCCAAGGGACCCCAAGGGCAGCAAGAGGGAGTTGGAAGGGACAACCTGAACTGCAGGTGTGCCAGCTGTGACCGGGCCCCCTCGCCAGCCCTTGGCCCCCTCCACCCCCAAGCCTGGCCCCATGGGCCCCTCTTTCTTCCTCCACTGTTCTCCATCTTGACGAAGGCATTATATAGAATCGTTTTAATCACTTTCAGATGTTAGAGCAGCATATTTTACAGGCATTTATATCCATTGCTTTCCTCAGCAAGGCATGTTACTACTTTTATCATCTAAGAAAAAAAAAAAAAAGACAAGGGAATTTCGGTCAAGCATTATTTCCATATTAGTAGTATTTGCAGAATAGGTGTAGAACTATTTAAGTTTAAACCTTGGTTTGGTAGTTTTTTGTTTTGTTTTTAAGGAAAAAAAGAAAAAGTAACCCCTACGTTTCCTGTTTTTTGTATTTAACTAATATATAATTTCTATAAGGTTACTCACTTCCCCTCCCCCTCCAAATACTTTGCATTCTCAATCGAAAATGAAAACAATCTGAGAGACAGGAAAAGTGCAATATTATCAAGAGGGATGCCAGGGCTTGTAGGACAGTGGCGGGGAGGGCCAGCAGCCCCACGTGCTGCTGGGGGAGGTGGGGCTCTTGGAAGGAGTCAGCGGTGGAGCCAACAGGTGACCTTTTATCCCTCCTCCCCCTTCCCTGGCAAGATGGCAGGGGTCTCTGCCAGAGGGCAGCCCCTTCTGCTGGGTGTTGTCCACCCAGAAGAACGGGATTCAGGGAAGTGGCATGGGGCGCTCGGCCTCCCAGGGCCCCAGCCCTCGGCGCACAGCAAGGACCTCCAGGAACTTCTCCTTGTTTTCATTTCCGTTCTTTTTCAGCCAGCTGCTCAGAAAGACCTGTCCTAAAAATCACCCTCAGCAGCCCTCTCTCACCCCAATCTCTTGATGTTTGGGCCATGATCCTTTTGATGTATGTTTGAGTCTTTCTAAAACTATGTAACCTCAAGTTCAGTTTTATGAGCAGGAACCCTCAGTGTAACCAAATCCTTCAGGGGGGTATGTGGGTGCCTTGAGCCTAGCGTCCTCCGGTGACACCAGTTCCCACAAGCCTGCAGCTGGGCCTGGCGCTGAGCTGGGGCCACCCATTCATCTCAATGACTTCAGCCCGAGTGAGGCGTGATCCTGCCTCTGCTCAACACCCCAACAGTTCCCAGAAGATCTCGAAAAAACGTGTTGGAGAAGCCTGCGGAGGTCCCTGCGGACATAACTTCCCCCGGCAGGTACCAAGCTCCCACCTCCTACCCAGGTGCGGGTAGAGAGGGCAGGATGGGAAGTCTCTGGGTCCAAGCCCTGGGAGCTCTGCCCCTCAGGGTGACAGGTGCAACCTCGCTGGCTCATCCCTTCCCCCTCCAGTACTGTACACTTGCTGCTCCAACCCATTTGATGAATTTCTGTACAAATATGGATCTGGTGCCCAGAGTGGAACTGTGCCCCTGTGGGTGGGTGTGTCTCCTTGGAGTGGATACGTCTATAGGTCCAATTTTCGAGACGATGCAGTGCTCTCTGGAAAGAGAACCATCCACATTGCTAAAGAATTAAGATTCCCTCACTTTTTTGAGGGCTGTGTGTTGTTGAGTAAGTGCATTGTGCATGTGGTGTGAGTGTGTGCGCGCGCGTGAGTGCATGTGTGTGAGTGTTGGTCATTTCCCACTTGAACTAAATAACATGGGGTTAGAGGAAAGAGATACTGGGCAAGCTGTCTCCACTGAACAAGTCCTTGGCATTGGGCAGGCCCCACGGGACTCACAGCTTCTGGCAGCAAGTGTATGTGTTACTCACACACATAATTCTGGCTGGAGAGTGCAATGTGTCTTTTTTTTTTTTTTTTTTTTGTAATTATTTTATTAAGTATTTAGTTGGAAACTTCACACTGGCATTAACAGATCTAGCAGAAGCAGCCTAGGCCATTGTCCCGGGCTCCAAAATGAAGATGTGGAAAGGAGGCGCCGCTGGGTGTGGAAGTGCTGAGGGGTTCAGACAGGGCCACCACCTGCAAACGCGTGTCTAGCAGGCTGCCTCCCAGCCTCTGCCGTGCATGTCACCACTGTGGGAACCCCCGTGTCCTGAGAGCTGCTTGCCCTCGGTTCTTGTGTGGCTGAGGGTGGGTCAGGCTGGTCGGGGTGAGAATTCTCTCACCTGCCTGTGTAGGCACATCACCCCCGATCTAGACCGCCGGCCCCAACTGAACACTTCACGGGGTCATGTGGAGGGCTCCCCCTTGACATTACTGAGCTTCTTGCCTCGATTATGATCTCTGGCTGGGGGTGGCCTCCGGTTCTCAAGTTCTGTGATCAGCCAGGGACAGAACAGGGCCATGACCTACGGCTTCATTTCAGGAGGACAGCCCCTCTGATGGTGGAGTCCCTCCCCGTTTTGTCCTGTACACCTGGGTCCTCAGGCCGCAAGTCGGGCACACTGGTGCTTATAGACTGGGTGGAGGGCTCTGCCTTCCTGGGCCTTGATCCCAACCTGCATGTAAAGTTGGTTTTACCACGCTATCCCCCGTTCCCCAATCCTATCTTTCTAATCTTGAGTTTGCACTTGACAATCAGCTTCCTCTCCCATCCCAGAACTTAGTGGCCTTAGAGAATAGGTCCCTGCGATGAAGGTCCCTCCTTTGCTCCCATTTCCATCCTGGCTAATGGGCTGGACCTCAGGAGGCAAGAAAGAGGAAGAAAGAATTATCGTTTTAAAGCAAAAGTATGGGTCGAGCACGTTGAAAGTAAGTGAGAGGCATGTCGGCGAGATGAATGTGTGAGAGACTGGGGTGGCTGGGTTTTCCATCCCTTCCCCGGGAAGGTGACTCCCAGAAGAGGATGTCTGCTAGGCAGAAAGGGAAAAGAGTGAGGAGGTTGAGTCAGGATTTAGAGTCTGGAGTTTTGTCTTTAGTAGAAAGAAGAAAGGAGTGAATTCTGAGTGTTTCAGAGGGAAGCGAGCCAGTAGGGAGGAAACAATGATTCAACACCCAAGGGCCCAGACAGAATAGGCTGGGAAAGTCTCAAGATTTGGCTGTAGAAGAAGCTGACCAGAGGAAACTGCTAGTTGCTGGACCACAAGCTGGGTCGCCAGCATGTTCTTAACGGTCACTGATTTACTTAGTAGAAAGCCAAAGTTGCCAGCAACAAACCAATCTTTGGAGAACATTCCTCCATCTCTTAGCTTCCAGGCTGATTTTGCCCACCTTTCTTTGTCCAATCTAGAACTGGCCTCTCAAATTACTTGAACCAGAGACCAGTAACCAGAATGGTTCATGCAGTAGGGACCCACCATCCCCAGACTGAAACCTCGGGGTCCAGACACCATCCAGCATATCTGGGGGGAAGGCAACCTCATTTGCTCTTCTGTTGACACCAGTTATTCTTGAGTATCTCTAACGATGTCTATGGTGTTTCAGTTTGCTGAGCCTGCCTCACTAGTGTGACTCAGAAGACGGTGCAATGCAGTCATCATGTTAGTGGCCTGTGAGCAAGGCATACTGCTCTTGAGCATTTCAAAGAAAGGTCAACAGAGCCTCCATTCTTGGATCTGCAACTTGGTCTCTGTAAGAGGTCTTCTTTAAATCCAGGACCCAGGATAGGAAAAGGGTTTCCCTGACAGTTTACAGGAAACCTGCAGGAAGGCGACTTCTGAAGAAGGCAGGTGTGAGTGGCAGGTTTGTGAAGCGTGGGTTTGTGGACTGCATGCTTGCACGTAAGCTAGCTGGATGTCTTTGGGGCGCTCCTCACAGTGTCCACGCAACCCCTCCCAGCTCCTAGTGGGACCTGTGGGGCTGACGGAGGTCATTCCCCTTTCTCCCCTCAGCAGAGAAACTGAAGAAAAGGACATTGAATTCAGTGCAGTTCGAGTGCTAAAAAATTTCCAGGCTCAATGGTGGTGCTAAACTGTCTCCATGTTTCTAATATTTTTAATAATGGGTTGGTTTTTTTTCAGTTGTTCTCATCACAAAAATGCAGTGTCCTTGGGGAAGGGACCCAGCCCCTTGACCTGCCACTTTCCAGGTGTCCTTTATCCTTTTGACGGGACTCTGGTCTGCAGAAAATGTTCTGTCTTGGCATGCTTCTAGACTGTAAGATTTGGGTTGTTTTGTTTTGTATTTTATGTTTACATGCATCTTGTATTTCCCCAAAAACTAAATAAAGTTTTTGCCTTTTTAACTGAACAG EMBV3_14718 TTCCTCAACCTAACTAGAAATGAGGGGTTTTCAGACGGCCCTGTCTAGACCAGTAGAGCC Gene GeneID:538845|ZNF527:NM_001076914:706_cdna Constitutive 0 NULL GeneID:538845 18 GENE ZNF527 MGC140431 zinc finger protein 527 EMBV3_18505 TTTGTTCAGGTGACAACGGATTAGCTCTCCTTCCCAGAACTAAAGGGCTGACAGTTTGGG Gene GeneID:515577|ACSBG1:NM_001024548:91_cdna Constitutive 1 NULL GeneID:515577 21 GENE ACSBG1 BG1 MGC137418 acyl-CoA synthetase bubblegum family member 1 EMBV3_27053 TCTACTGCTGGTGGAGAAAGGAAGCAGCGCCATACGGCAGAAAACCCAAGTTCCACTTCT Gene GeneID:100296892|LOC100296892:XM_002692318:74_cdna Constitutive 0 NULL GeneID:100296892 13 GENE LOC100296892 NULL hypothetical protein LOC100296892 EMBV3_43509 TGCTCTGGGATCCCAACGACTAAAAGAATGGTGTTTGACTTTGAACTGACTCCAGAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18175 TCCATATTTATACGGCAGAGAAGATGTAGGACTGTCTGTGTCTGGCCCTGTCCTGGCATC Gene GeneID:414274|SMARCA4:NM_001105614:294_cdna Constitutive 0 NULL GeneID:414274 7 GENE SMARCA4 BRG1 MGC148937 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 EMBV3_19919 TGAATTCCGCGACGAAGCGTGCAAAAAAGAGATCCGCGACTTCTTCGATTGTGCTTCGAG Gene GeneID:540610|CHCHD1:NM_001046484:392_cdna Constitutive 0 NULL GeneID:540610 28 GENE CHCHD1 MGC128794 coiled-coil-helix-coiled-coil-helix domain containing 1 EMBV3_33113 AACATGATCGAACCTCGGGAGCGAGCCAAGTTCAAGCGCAAGTACAAAGTGAAACTGGTG Gene GeneID:506401|GLTSCR2:NM_001038507:145_cdna Constitutive 0 NULL GeneID:506401 18 GENE GLTSCR2 MGC133834 glioma tumor suppressor candidate region gene 2 EMBV3_12262 ATACCAGGCATGAGGGGACTGCTCAGCATATCTTTGCCTGTTTACACAAGTGCTGAGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28262 TCTCTGAGAAGACATGTGCCCTCCCTCTTTCCTTGCTGAAGTGGTGGGCAAGAAAATGGA Gene GeneID:100336529|LOC100336529:XM_002689002:32_cdna Constitutive 0 NULL GeneID:100336529 7 GENE LOC100336529 NULL hypothetical protein LOC100336529 EMBV3_00801 GTTGGAATCTTGGGATAGAAAACCCTCGATACCTGAGACAGAAGCCCATCCCAGTTACTC Gene GeneID:617266|CCDC46:NM_001076451:28_cdna Constitutive 0 NULL GeneID:617266 19 GENE CCDC46 NULL coiled-coil domain containing 46 EMBV3_03643 TGGGTCCATTATATGATCCATGAACCAGAACCTCACATCTTGCTGTTCCGGCGGCCACTG Gene GeneID:615827|CKS1B:NM_001113311:215_cdna Constitutive 0 NULL GeneID:615827 3 GENE CKS1B CKS-1 CKS1 MGC142665 Sid_1334 CDC28 protein kinase regulatory subunit 1B EMBV3_42858 TTTCAACACTCTGTGCCAATATCTCAAGCAGGTTTTTAATATACCACTAGCCACAATTGC Gene GeneID:539334|IL1RAP:NM_001076155:108_cdna Constitutive 0 NULL GeneID:539334 1 GENE IL1RAP MGC143302 interleukin 1 receptor accessory protein EMBV3_29774 CTACCGCAACGAGAAGCCTCTGCACCACAACTAGAGAGCAGCCCCAATTCACGACAAATA Gene BVV0102_362787 + 0 NULL GK000011.2:2435807-2488155 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026617 1 XLOC_015082 Coding TCONS_00026617 XLOC_015082 Coding Coding LOC511385 11:2486889-2494817 j TSS19064 2286 1 TCONS_00026617_2 268 0.148731408573928 4 0.712123123501955 6.54691527914183e-05 0.00014505610634342 0.000167136153272934 7.53555716245951e-05 0 0 5.10210882757063e-06 3.10483636222363e-05 0.000327893295167916 0 0 0 1.25515524002057e-06 2.05773742606393e-06 8.3510051383854e-12 9.24290434510952e-05 0 0 0.000354467891766924 5.62459950195958e-05 0 0 0 1.46672266608911e-05 0.00026889602022643 1.84891874938761e-05 4.61350656714217e-05 0 0 1.05201152622846e-05 XM_005193792.1 LOC511385 PREDICTED: Bos taurus E3 ubiquitin-protein ligase NEURL3-like (LOC511385), transcript variant X1, mRNA. 0.0 4123 100.00 0.999562554680665 NM_001285485.1 NEURL3 Homo sapiens neuralized homolog 3 (Drosophila) pseudogene (NEURL3), 0.0 801 77.65 0.423884514435696 TCONS_00026617_2 sp|Q96EH8|NEUL3_HUMAN NEUL3_HUMAN E3 ubiquitin-protein ligase NEURL3; 2e-127 367 70.88 0.958955223880597 3 coding CTCCACATTCGACCTCGGCCATCCTCCTGAGTCCCCGCTTCCTCCGGGCCAGCCAGCTGCACCGGCCTGTTGCAAACCAGAAGTCATCAGGAAATTCCCTGCAAACTCTAATTAATCATCAACGCTGTAATATGATCCTGGCCGCATGACAAAGGGACCTGCCGAATATCTTTGGGAAACCTGTCCCCTGGCCTTCTTCAGATCCAAGGACCCATGCCTGAGGAGCCCAGGCGGATGGGGGCCCAGATCTGCTCTCAGGCTGATGCCGAGTCTCCCCGAGAGGCGCTCCGCTTCCATGCCCAGGCGGTGGGCGCACAGGTGCGCCTGGATGCTGAGCGGAGCACCGCGTACAGGCGCGCCACGTTCCACGACGGCATCGTGTTCAGCCAGCGGCCGGTGCGGCTGGGAGAGCGCGTGGCGCTGCGCTTGCTGTGGCACGAGCACGGCTGGCTGGGCGGCCTCCGCGTGGGCTTCACGCGCCTGGACCCCGCGCGCGTGTCCGCGCCCAGCCTGCCGCCCTTCTTGTGCCCGGACCTGGAGCAGCAGAGTCAGACCTGGGCGGCCATGCTGCCTGACGGCCGCGCGAGCCCGGGGGACGTGGTGCGCTTCTGGGTGAACCGCCGGGGCCAGATCTTCGCCCAGGTCAACTCGGGGCCCCAGCGGCGGCTGCGCGAGGGCGTGCTCATGGGTGCCCCGCTCTGGGCCGTGATGGACCTGTACGGGACCACCAAGGCCATCGAGCTGCTAGATCCTACAGCCAACGGCTTCCCCACAACCACGCCAAGGGTCCTCAGTGATGAGGCTCTGCCTGGGCCCAAAGGAGAAGAGTGTGCCATCTGCTTCCACCAGGTTGCCAACACCTGCCTAGTCCCCTGTGGCCACACACACTTCTGCAGCTCCTGTGCCTGGAGGGTCTTCAGGGACACGGCCAGATGCCCCATGTGTCGCTGGGAGATCAAGGCGGTGGCCCCAGCTTGGGACCCTCTTGTTCTGGGTGCTGGAGATGGCCTCCCAGTATAGGTGCAGAGCTCTGAGCCCGGCCCCTGCCGACGGAGGAGGTGCAGCTCTGCCGTCCTTCTGGAGAAGAGTTGGCGATGCTGGTCAGCAGCAGGCGTGGCGGAGAGACGGCTCAAGGTCACAATGGCTCTACCCCTGGTCAGCAAGTTAGGGCCAGAGGAGCCAGGAGACGCCCTTTTCTGCCCACACCGGAACTACCTCCCTGGCTGGAGAAGGTGGCTGGCAATGGGCCAGCCAGGATCTCGCCCCTCTGCTTTGTCCCAGATTCATTGCTATGTGCCGAGGCTTTTAACTAGCCTTGGGGTTCAGCCACCATGGACCTGGCAACCCGTGGTACACCTAAGTCCAAGGAGTTCCAAGAACCCACCTGTGTCAGTGAGAAGGGCCTTTGTGTAGACAGGGAGGCTTGATCCCTGGTTTTATGCCTGAGGAAGTTAAGGCATATGTGCGTGTCTGGTGAAGCCTTGGCCACCTAGGGTATTGAGGAGCCTGGACCAGATGCAGGGAGCAGCTGGGTGGAATTTTTTTTTTGATTGAAGTATAGTTGATGTACAATATTGTATAAGTTACAGATGTACTGTTTAGTCATAATTCTTAAAGGTTATACTCCATTTGTCGTTATTATAAGACTCTTGGCTATATTCACCTGTTGCGCAATGTGTCCTTGTAGCTTACTTTATATCTAGTAGTTTGTACCTCTCAATCCCTACCCCTAAATTGCCTCTCCCCTGTTCCCTCTCCCCACTAGTAACCACACATTTTGGTGTGCTCATGAGGGGAGGGGCGCTCAGGGCTTTTTGACTCCATTATCTTGGCCTCTGTCTACCTGGTAGAATGTTCACAGTCTGTAGGGAAGCTAGGTCACTTCTACAAGTTCTCTGAGGACTTCCCTGGTCGTCCAGTGGTTAAGAATCTGCCTGCCAATGCAGGAGACACCAGTTCGATCCCTGGTCTGGGAATTAAGATCCCACATGCCGTGGGACCACTTGGCCCTTGGACTGCGACTACTGAGCCCACACGTTCTAGAACCCATGAGCCACAACTGCTGAAGCCCATGCGCCCTAGAGCCCGTGCTCCACACGAGAAGCTACCGCAACGAGAAGCCTCTGCACCGCAACTAGAGAGCAGCCCCAATTCACGACAAATAGAGAAAGGCCGCTCTCAGCAACCAAGAGCCGTGCGCTGCGACAGAACCCCAGTGCAGCCATACATAAACAAGTAAAGAGATAAATAGAAACTAATTAATTAAAAACAAGTCCTCTGTAAAGG EMBV3_29970 AAATGGGACAACCCCTTGACCCCAGAGCCTGAGGAAATCACCCAAAATAGCCCATTCTAG Gene BVV0102_182361 - 1 EMBV3_03318 GK000017.2:71619992-71637248 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11169 TATCCTGGGCAAGTATCGCGCCGGCTTCCATGAGTGTCTGGCCGAAGTGAATCGCTTCCT Gene GeneID:507480|HES4:XM_002694136:506_cdna Constitutive 0 NULL GeneID:507480 16 GENE HES4 NULL hairy and enhancer of split 4 (Drosophila) EMBV3_01651 AACCTGCCAACGTGGTTCCTCTTGGAGTCTGTCACATTCTGCCATCTTCCTTGCTAGTCT Gene BVT0102_041678 + 0 NULL GK000018.2:64812318-64819877 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32064 CTCAGAAGAGAGAGCTGAGGTGGCTGAGAGTATTCCACCAAAGAAGATAAATATGAAGAG Variant GeneID:497015|TPM2:NM_001010995:23_cdna 659^734 3 EMBV3_41207 GeneID:497015 8 GENE TPM2 MGC129100 tropomyosin 2 (beta) EMBV3_00886 TATACAAATGAGAACCCAAATAACTACCAAAAAATGTTTAAAGTGGAGAAGGTGAACTGC Variant GeneID:510772|PNLIPRP2:NM_001105355:30_cdna 285^410 1 EMBV3_36129 GeneID:510772 26 GENE PNLIPRP2 MGC157384 PL-RP2 pancreatic lipase-related protein 2 EMBV3_16702 TGTCAAGGCCTGAATGTGGTGGGTTGTGACCTCGTGGAAGTTTCACCACCCTACGATCCT Gene GeneID:514509|AGMAT:XM_002694143:526_cdna UTR3_Alt 2 NULL GeneID:514509 16 GENE AGMAT NULL agmatine ureohydrolase (agmatinase) EMBV3_02043 TTTGCCCTCATGTGCTGCCTCCTCTTCCTCCCAACCATCCAGGACAACATTGGAGTTGAT Gene GeneID:505719|LOC505719:NM_001045924:52_cdna Constitutive 0 NULL GeneID:505719 3 GENE LOC505719 MGC128936 hypothetical protein LOC505719 EMBV3_31537 CATAAAGCACAGATATTAATAGAGTTTCCTGAAGAACCTGAAACACCAAGAAACATGAAG Gene BVV0102_199708 + 1 EMBV3_43354 GK000030.2:111704837-111752107 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24367 AAGACTCTGTGAACCCTGGAGTCATGGTGTTGCTGGGTTGTGGTGCCTTATCTAGTACCT Gene GeneID:534742|SLC25A24:NM_001099066:152_cdna UTR3_Alt 2 NULL GeneID:534742 3 GENE SLC25A24 MGC157062 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 EMBV3_40407 CCCCCTCATCCTTTACCGCTCAGGTTTGGAGATGGAAACAAAAGGAAACACTGGAACAGG Gene GeneID:785867|LOC785867:XR_083740:38_cdna Constitutive 0 NULL GeneID:785867 8 PSEUDO LOC785867 NULL similar to Rho-related BTB domain containing 2 EMBV3_14405 GCTGGCCTCAGCAGAAGCTGGATTAGACTACACTGGCATCAGCCAAAAACTGAACTTTGC Gene GeneID:781161|FREM3:XM_002694360:137_cdna Constitutive 0 NULL GeneID:781161 17 GENE FREM3 NULL FRAS1 related extracellular matrix 3 EMBV3_40131 CAACATTCGCAATGCCAGGAAACACTTTGAGAAGCTGGAGAGAGTGGATGGTCCCAAGCA Gene GeneID:618207|RRAGA:NM_001035499:14_cdna Constitutive 0 NULL GeneID:618207 8 GENE RRAGA MGC128865 Ras-related GTP binding A EMBV3_09621 AGGCTGGTCCCATACTTGCAAAACAGGGTCAAGATGAATTGGTATTGGTGGCCCAGTGGA Gene GeneID:510498|SBF2:NM_001103237:98_cdna Constitutive 0 NULL GeneID:510498 15 GENE SBF2 MGC166114 SET binding factor 2 EMBV3_31036 GAACCCATTATTGCTGCATGTGTTGTGGTCTTTCTGACCTTGGTCTTTGGAGTGATTGCC Gene GeneID:506345|TMIGD1:NM_001035036:64_cdna Constitutive 0 NULL GeneID:506345 19 GENE TMIGD1 MGC126922 TMIGD transmembrane and immunoglobulin domain containing 1 EMBV3_07905 CCTGAAGTTGGAAGATGCAGGAACTAATATTTCTGACTAATGGCTGCTCCACTGAGGTGC Gene BVT0102_079349 + 0 NULL GK000004.2:96770360-97318803 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20829 CTTTGCACGCTCTGTTCCTCTCTTTCCTCCAGAAGGAAGTTGATCCTGGTGATTTCAGCC Gene BVV0102_117605 + 0 NULL GK000014.2:31859819-31996558 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135404 TCONS_00135412 TCONS_00135405 TCONS_00135410 TCONS_00135413 TCONS_00135406 TCONS_00135411 TCONS_00135409 TCONS_00135407 TCONS_00135408 1 XLOC_081707 Coding TCONS_00135404 XLOC_081707 Coding Coding LOC789017 23:47897747-47908528 j TSS100743 4395 1 TCONS_00135404_4 308 5 0.592764378478664 1.78996622467475e-63 2.37372203410535e-44 2.41444016816602e-49 1.69401930975068e-52 5.09478778143013e-98 5.33051182696773e-41 1.33847515569119e-39 1.94965503951844e-52 0.000252442113766071 4.64714913093615e-95 3.48371756018376e-05 1.56947120207373e-49 9.25351966192981e-06 1.93831184750198e-263 1.44484449777638e-179 0.00186558418898827 0.000614229387537883 0.00321696430570633 4.92510120473691e-155 6.98224987969963e-129 1.17912831037273e-41 3.42875134437709e-40 0.000802945629720245 0.000249162687304118 0 7.18908803713679e-05 1.31631318204554e-43 0.000324064047436038 3.34983964390337e-36 0.000485386275339454 XM_003583942.2 RREB1 PREDICTED: Bos taurus ras responsive element binding protein 1 (RREB1), mRNA. 0.0 7642 99.98 0.964732650739477 XM_005249272.1 RREB1 PREDICTED: Homo sapiens ras responsive element binding protein 1 (RREB1), transcript variant X1, mRNA. 0.0 1485 73.19 0.552445961319681 TCONS_00135404_4 sp|Q92766|RREB1_HUMAN RREB1_HUMAN Ras-responsive element-binding protein 1; 3e-110 353 65.80 0.961038961038961 4 coding 0 0 0 0 -0.131768257725068 0.491457595231536 -0.00797505268818088 0.897556275593962 TCCTCCTCACTCTGTGCCCTGGCTCTGCCATGCGTCCATCCTTGCAGGCGCAGATCAGGCGCCATGGAGCCCCCAGAAGGAATCCTAACAGAAGGAGGGGGCGCTGGTCACAGCAGATAGTGGCCAGGTCAGAAACCCTTCCCTTGTCAAAAATGCGGTGCCTTCTTTTCCACCAAATCTAACTGTGAACGACACCAGTTGCGCAAACACGGAGTTACCGCCTGTTCCCTGAGAAGAAATGGGCTTATCCCCCAGTCAAAAGAGAGTGATGGAGCCCGTGATAGCACAGACAGCCAGTCGGACGCAGAGGCCTCGGCGGCTGGCAGCGAAGTGCTGGACCTCACCGCCCGGGAGCTGCCCGCGCCAACCCCAGAAGGCGCCTCGGAGCCCAGCCCGGCCGCGGCCCCGGCCCGGGAGGACCCCCCGGGGGGCGCGCAGGAGGAGGCGGAGCAGGTGGCGACGGAGGAGGACCTGCATCCCGAAGAGGAGGACGCGCAGCCCACGGAGGAGGAGGAGGGGGAGGAGGAGTGCGCGGAGGAGGAGCCGGCCGAGGCCGCCGACGGCCCCGAGGAGGACACGGTCAGCAACAAGAGCCTGGACCTCAACCTCGCCAGCACGCTGATGGGCTTCAAGCTGGCCGAGGGCGAGGCGGGCGCGCAGGACCACAAGCACACCTGCCACGTGTGCGGCAAGAGCTTCAAGTTCCTCACGACCCTCAGCCGCCACCGCAAGGCCCACGACCGCGAGGAGCCCGGTGACGAGAGCGCGCCCCCCCGGGAGCACGAGGGGCCGCACCCGGCTGACCCTGAGCCCCCCGCCCCTGAGCCCCCGGCCGAGGCGGAGGTCACACCCGATGCCCCGGCGGAGAAGCAGAGCGAGGCAGCCGAGGGCCCCTCGGACGCGGACGCGGACGGGGACGGGGAGGGCCCCGCCGAGAAGAGACCGCTGGAGAAGAGTGACGACGACAAGAAGCCAAAGACAGACACGCCCAGGAGCGCAGCCAGCAAGGCGGACAAGAGGAAGAAGGTGTGCAGCGTGTGTAGCAAGAGGTTCTGGTCCCTGCAGGACCTGACCCGGCACATGAGGTCGCACACAGGAGAGAGGCCGTACAAGTGCCAGACCTGCGAGCGGACCTTCACGCTGAAGCACAGCCTGGTGCGCCACCAGCGGGTCCACCAGAAGGCCCGGCACGCCAAGCGCCACGGCAGGGACAGCGACCGGGAGGAGCACGCCGAGGAGGACAGCGAGAGCGAGTCCGCCCACAGTGGCGCGCACCCCGTGTCGGAGGGCGAGGGCGACGCGGGCCTGCACGCCAGCGCCCACGTGGCTCTCACGCGGAGCCGGAGGGAGAGCCTGGCCGCCAAGGACGCCGGCCGCCGGGAGGAGGCCGCCGCCGCAGGCAGCCCTCCGGAGCCAGCGCCCCAGGGCGACCCCGGCCGGGAGAGCCCCGCGGGCCTCCTGCAGGACCTGCTGGAGCTGCCGGGCCGCAGGCCCGCCCACCCCCTCTTGCCCACTGCCGACAGTGCCTCGCTCCTGGGCCTGGAATGACGACCCGGCCCGCCCCCCAGCACGCAGACGAGAGCCAGCAGAGCAAAGCGCCCTGAATCTGCTTCCCGAGGTGCCCTCAGTGCCCCTTGGCTGCTGGGAGGCCAGAGAGAGAGGGGGCGGTCGCCCCCGGGTGCCATCGCCTTACAGACCGCGGGGAAGGGCCGCACCAGCGATTCGAGTGCCTTAACTACTTACAGCCCTTCGTGTCCTCCTGGGTGTTGTGTTTCCAAAACGACTTTTTGAAAAACAAAGCAAATATTTTAATGAATTATTTGGAGAGGACCTTTTCATTTAAGCATTAACATTACCTTCTGTCTTGGTGTGTGTGAGCTTGTTTTTGCAAATCTGTGATAGTCACGTTTGTTCTATGAGCTGGAAACAGACGAAAAAAAAAACATGCCCTTGGATACCTATGGCCAATAACTGGAAGAAAGTGACGCGAATTCCATGTAAATTCCCAGAGGAAATGTGGATAAGATGCTCATTTCTCAAATAGACTTTTTTTTTTCTGTTTGCTACATGGTGGAGCTGTAATCTGGTCCTCGGTGTACTGCAGGATGTGGTTGATGAAGGTTTCCAATTTGGTTCAAGCCAAAACCAGGAAAGGTTCTAGCTTCGACCTGGGACACATTTCCACTCTCAGCGTTAGACATGCCATTACTGCTGCAGTTTCCAGACAGAGGAGAGTCCCCCTGGCAACTGAACCGGCGGAAAACATGCATAGATGTCATATATCTGATTCCTACCCCCAACCCCCACCCTTTTCGGTATATGTATTAATAATATTATTATTATTATTATTATTTGTAGTTCATCAGTTTGCTGGTCTCTGCAGTCAGCAGAAACAAATGGGCAATATTTGTCCTGGGAGACCCGGGCCGCCCCCGCCCGGGCCTCCCCGCGCGTGAGCGTCCACCCGCAGCCTCTGCCAGGCCCCCTGGGGCGGCAGCTCTTCTACTGTACTCAGACACGCCTCTCTTCTGTGACTGCAGCACCCAGCAGGGGCCCCGCGGTCCTCCGCCCGCCCCTGGGGGGCCGGGGGGCAGTGGGGAGGGGAGAGGAGGCGAGGTGGGCGCCGGGGCCTCCAGGGAAGCCGGGCGGCAGGACCCGTTGCTCGCCAGGTCTTCCTGCCAAACCCAGCCCAAACCCACCGGCGCCCCCGTCCTTTGCAGAGCGAGGGAGTTCTACTACTGGTAACAAAACTGCACACGGGAGACGGAGGAGGGATGTACATTCCCTTCCTGTAATCTGGGGTTGGTGCTTGAAGAGAAACACGTGTCTCTAGTTTCTGGGTCGCCCGAGCCCCTGGGCGCACAGAGGTGGATTTTCTTTTCGTGAGCATCATATGCAGGCAATAGACCCCCTCACTGTAGCTGCCAGCAGTGACTGGAAACTGACCCTACTGTAGCTGGGCTGTGCTCAGCGGCCTGTCCTCTAGCCGGGACCCCCCGGGACCCCCCGAGCCTCAGTGCCTCAGGCCCCCCCCGGGACCCAGGGCTCCTCTGTCCTCAGACCTGTGCCCACCACAGGGACCCCCGCCCTCCCTTCCTCACCCACTCCCGGTGGCCAAAATCCAACCGCCCAGACTTCAAAGGAAGCTGTGTGTTCTTGATGTGATGAAAAAGCGGTATCTTTGCATGTGAAAGGCGAAAGGTTGAGGTATATTAAGATTTTTAACTGTATTAGGGATGTGTGAACCAGTTTCAAAATGAGGTTTTATTTACTTTAGGTGAAGACGAATCAGAACCAATGACCCCCCCCGCCCCGCCCCCGACCCTGTATCACTTCATACGAAGTGTGGTGTGCTTGCCTAAAACCAGTTCATTCATCCCTTAATTTTTTATGATGATTGCTGTTATTTTCATTGTTATTATTATTATTTGGGTGTTTTGTTTTCCTTTGCAGCTCTCCACACTAAAACTCGGAACGTTGTGGGGAGAAGCCACGAGTTAACTCTGCGCTGGGGTGAGATGTGGCCGGAACCAGCCCGGCACTGCGGCCAAGGCTGCCGCTCGCAATAATCACTATTGATTTAAAGCTTTATTTAGCCTTCATCTGTACCCTCGTAGTCGATAAGGTCTTGCCACGTTTTATTAGTGAGGTTGAGAGATGTATCATCTGTTTGTTGTTCTGTCCCCTCCCCCAGTATTAAACTGTGAAATTTGTGATTTGTTTAAACTCTGGGTGAATCATAGCTTAGTTTGCATGTCCAGCTCATTTGTTCCTATACATTTTGTTTGATTCTTTTTCTCCTTCTCTCAGGGCTTTTACAAAAAAAAAAAAAAAGAAATATATATATATGGATCTTCTGAAAAGTTTTTTGAGGTGCAAGTTTCTCTCTTTTGTTTTTTCTCTTTGATTTATGAACACGATGCTGAGATTCAATCACTACATGAAACTCCCGGCTGTGAAAACAAGACGAAAACCCGGGGCTGTTTTTCCCACCAGCCCCCAGGGGAAGCCGTGTGGCAGTCGGATGCCCGTTTGTTTCAGAAAGTCTCACCGTTCTTTGCACGCTCTGTTCCTCTCTTTCCTCCAGAAGGAAGTTGATCCTGGTGATTTCAGCCCATGCATTAAACAGGAAACAATAATAAATGTGTAGAATTCATATTTTTCTAAAGGGAACTTAAAAAACTGCTGCTACATGTTGTGTACAAAACTGGTTTATGCCACAAGAACAGAGAATCACAGATCCGGGTTTGGTACTTCTCGTCCCTCTTTGTGTCCAGTTGTATAGACTTCCAGATTCAAAATGAGAAGAAACGCTGTTCTGTATCAAACCATCTACAAGCAATAAATGTTATATTTTAAAAACGGCAGGTTGCTGATCCTGCGGCCGTCCTTTGA EMBV3_31262 AGTATCCTCCAGTCAGTCGGAAGTACGAGTGGAACTGAAGTCAAAGCAATAACGTACTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10616 AGCCAGGCAACCACTGGGCGGTGATGAGACCGAGAACTGGCTGAATCAAAAAGTCATCTA Gene BVV0102_070840 + 0 NULL GK000007.2:22441577-22448899 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212478 TCONS_00212477 TCONS_00212479 1 XLOC_130198 Coding TCONS_00212479 XLOC_130198 Coding Coding LMNB2 7:22428090-22448438 = TSS159438 4625 1 TCONS_00212479_3 628 12 0.773283530741633 0.011181993767959 0.00516129411690423 0.00702044110581674 0.00182570818494797 0.00285713802469249 0.000408718750452754 0.00178536990674034 0.00209364333706598 0.00301239392339849 0.002859240999843 0.000586461085089467 0.00133355365313356 0.000243704466669328 0.000438357808055425 0.000477916984197085 0.0133775972693284 0.00517629914058165 0.00298042821475619 0.00539867872003725 0.00546082421458568 0.00138922057087228 0.00516265992098108 0.00262945103901305 0.00614040491806274 0.00428364578019395 0.0042143542516871 0.00275589621864368 0.00242772733029646 0.00194223229693899 0.00193340641899927 NM_001276353.1 LMNB2 Bos taurus lamin B2 (LMNB2), mRNA. 0.0 8336 99.98 0.999783783783784 NM_032737.3 LMNB2 Homo sapiens lamin B2 (LMNB2), mRNA. 0.0 2408 86.10 0.443243243243243 TCONS_00212479_3 sp|Q03252|LMNB2_HUMAN LMNB2_HUMAN Lamin-B2; 0.0 976 88.25 0.960191082802548 2 coding 0 0 0 0 -0.456895661539766 0.0880414785436366 -0.0435055176581087 0.359893632585059 GACAGGCGCCATCTTGGTCGGCGGCGCGGATTGAATGAGCCCGCCGAGCCGCGGCCGCCGTTCCGAGCAGCGCGGACCCCGAACCACTGCCGCTGCCGCCGCCGCCATGGCCACGCCGCAGCCCGGCCGCGCGGGCGGGCCCTCCACGCCGCTGTCGCCCACGCGCTTGTCGCGGCTGCAGGAGAAGGAGGAGCTGCGCGAGCTCAATGACCGCCTGGCGCACTACATCGACCGCGTCCGCGCGCTGGAGCTGGAGAACGACCGGCTGCAGCTTAAGATCTCCGAGCGGGAGGAGGTGACCACGCGCGAGGTGAGTGGCATCAAGACATTGTACGAGGCAGAGCTGGCTGACGCCCGCCGGGTGCTGGACGAGACGGCCCGGGACCGTGCCTGCCTGCAGATCGAAATGGGCAAGCTGAGGGCCGAGCTGGAGGAGGCCACCAAGAGCGCCAAGAAGAGGGAGGGTGAGCTCACGGTGGCCCAGGGCCGTGTCAGGGACCTGGAGTCCGTGTTCCACCGAAGTGAGGCCGAGCTCGCGGCCGCACTTAGTGACAAGCGCACCTTGGAGAACGATGTGGCAGAACTGCGGGCCCAGCTGGCTAAGGCGGAGGATGGGCATGCGGTGGCTAAGAAGCAGCTGGAGAAGGAGACGCTGATGCGCGTGGACCTGGAGAACCGCTGCCAGAGCCTGCAGGAGGAGCTGGCCTTCCGCAAGGATGTCTTTGAGGAGGAAGTGCGTGAGACGCGGCGGCGGCATGAGCGCCGCCTGGTGGAGGTGGACAGCAGCCGGCAGCAGGAGTATGACTTTAAGATGGCCCAGGCGCTGGAGGAATTGCGCGCCCAGCACGACGAGCAAGTGCGGCTGTACCGTCTGGAACTGGAGCAGACCTACCAAGCCAAGCTGGACAACGCCAAGCTGAGCTCCGACCAGAATGACAAGGCTGCCAGCGCCGCTCGGGAGGAGCTGAAGGAGGCCCGCATGCGGGTTGAATCCCTCAGCTACCAGCTCTCCAGCCTTCAGAAGCAGGCGAGCGCGGCCGAGGACCGGATCCGTGAACTAGAGGAGACCGTGGCTGGGGAGCGGGACAAGTTCCGGAAGATGCTGGACGCCAAAGAACGAGAAATGATGGAAGTGCGGGACATGATGCAGCAGCAGCTGGCCGAGTACCAGGAGCTGCTGGACGTCAAGCTGGCCCTGGACATGGAGATCAGCGCCTACCGCAAGCTGCTGGAGGGAGAGGAGGAGAGGCTGAAGCTGTCCCCCAGCCCGTCATCGCGGATCACCATCTCTCGGGCCACAACGAGCAGCAGCGGCAGCAGTGTATCCACAGCCGGGCGCCCGGGCCGCAGCAAGCGGAAGCGGCTGGAGGTGCAGGAGCCGCCGGGCACGGGCTCCAGTGGCCTCGGCTCCAGCAGCAGCACCAGCAGCGGCGGCAGCTTCCACCTGGCGCAGCAGGCCTCTGCCTCAGGCAGCGTCAGCATCGAGGAGATCGATCTGGAGGGCAGGTTCGTGCAACTGAAGAACAGCTCTGACAAGGATCAGTCTCTGGGCAACTGGAGGATCAAGAGGCAGGTCCTGGAAGGGGAGGAGATTTCCTACAAGTTCACCCCCAAGTATGTGCTGCGGGCCGGCCAGACTGTCACGGTGTGGGCAGCTGGAGCGGGGGTGGCTCACAGCCCCCCATCCACACTCGTGTGGAAAAGCCAGAACAGCTGGGGCACCGGTGAGAGCTTCCGGACCACCCTGGTCAATGCTGATGGGGAGGAAGTGGCCATGAGAACCGTGAAGCAGTCTTCAGTGGTGCGGGAGACCGAGAATGGGGAGGAGGGCGAGGACGAGGCAGCTGAGTTTGGAGAGGAGGATCTTTTCCACCAGCAGGGGGACCCGAGGACCACCTCTCGAGGCTGCCGCGTCATGTGAACCGAACATGCCTCATCACGTCTTTCTTTACCCAGAGCCACTGAAAACTATTTTTATATCATTGGCTTCTTTAATCCTTGGTACATTTCTAGAGAATTTTTAAGCAAACTGCCAGAGCATTGGGGGTGGGTCTCTATTGATCTTTCCTGTCGGCGGGTTTCCTGGGACCCTTCACCACTGACCAGACTCTGTTGGTGCCCTGTCCAACCAGCCCAGGAGCCTAGTGGCTAGCGGACTTTGGGGAGTCCAGCAGGGGTGGGAGGAGGCCCATTGGCTGCGTGGGTCTCTTCTGCAGCCTGGAGTCAGGGCGGGAGAGGAGGCCTGGGATGGACAGAGCAGAACTGCATAAGGATCCATAGTTTGTTTCATTTAAGCTTTCAAAAAAACCAAATTCAGAATCCAGCTTCTGACCTGGTGGGGAGCAGGGGCACCCCTGCGGTTTCCGTGACTCAGCCAACTGAGCACCCGAAGGAGGGCTAGAAGCAGCTTGTACTGTCAGACCTGGGCTTTGGGTGGTTTCTGCTCAGCCCTTGGGAGTCGGGTGTGTGGGGTGGGCCTGTCGGCTCCCTCTCTGGCTGCCGGAGCCTCACGTTTCTGGGCCTTTCTGCAGTCAACTTCCTCACCCTGTGGGACAGGCAAGAAGGAAGCTTGGGACCTGGGGGCGATTCCTCTCTGAGACTTATCCCCAGGTCAGTATCAAGGGGATGAGTGTGACAACCTTGGACATGACATCCATGTGCAACCACCGCTTTCTGCCCTCCCATCTGTGGAGGGTGACGAGGGCAAGCCGTGGGACTCCCTGACCTCCAGCCCTGTGCCTTGAGCACAGGTCATGCCCACTCCTGTGTTCTTGGGTGCACACGGATACGCTAGCTTCCTCTGTAGCTTCCTGCTGAAACGGTGTTTCTTAGACAGACCTGCCCATGCCAGCAGACCTCTGTGGAATGCTCCGTGCCACAGCCCAGCTTCTGATCACCCAGAGACCCCCCTCCCTGCATTAGTAGACCTTTGACCCGCGCCACGTAGATACACAGAAGTTATTTTTTTAATGGATATTTATTTTTTTACATTGGTCAGTACAGGTTGCCAGGCTCCCACCTCAGGGGCTCACTCAAGGGTCACTGGGACAGTCCCCTCTGGGGGTGGGGAGGTGGCGTCATCAGGGGGCTCTGTCCCTGTGGACTTTGCGCCCCTGGCTGACTCTTCAGAAAGCGCAGCTCAAGTCTTAAAGACGCAATACTGAGCCATGGAGGCAGGCTGGCCCCTGAAGGCAGCCTGCTTCCAGGTAGGCTGAGTGCCAGCCCCTCAGGGTTTACCCAAGGCTGGAGCAGCCCGTCCACCTCCTTTCCCTGGGAACTGCTCATGGTGAGGAGGGCCCAAGCCCCAGGACAGGAAAGTGTCAGCCACCGGCAAAACCAAGCTTCTCCAAGTCTAGAATCTCCCTGCAGGCCAAAGCTTTGGGCATCTTTCCTTGGCTACCAGAGTCCTTGGCCCGAGGGCTGTGCTTGCCCTGTGGAGGGAAGTGGCCTCACCAGAAAAATGGTGCAGCCCATGAGAAGCTTCCTGTCCTGACAGCACCTTCTCTTTTCCACCCTCCCTCACCCCCACCCCCCTGCCAGGAGTGCTTCCAGGTACAGGCTGCTCCCTTCCCCTGGCATAACAGGAGCTGAGTAGACCATGAGGGTCTGGAGAGCGGGATGGGGTCTGGGTGGTCCTGGGGCGAGTGGAAACTGCACTGGTCTCAGCCACACCCTTCAGGGTATTTTGGAAATCTCTGGGGATCGAAGCTGTGTCCTGGAATTCTGGGTGTGAAGCGGTTTTGCAGGCTGGGCTTGAGGACTTCAGGAAGGAAAGGAGAGGGCCCCACCCTCCCATCAGGCCCAGAGGGCCTAAAAAACTGCAGAACCCCCAGGCTCATTAGATGACTTCTTGATTCAGCCAGTTCTTGGTCTCATCACCGCCCAGTGGTTGCCTGGCTGAGATCATGAGTGGAGCCTGGAAGTGGCCCTCCCAGGCTGGGAAGCCCTTGACTGGTGAGGGCAGGGTGCGCTGGACTGGTGGCCAGTTGGGGCTGGAGGTTGGTGGTAATTTGGTAATTACCAGTCTTTGGTAATTAAGTAGTTGAAAACAAAGGACAAAGTCCAATGTTACAATGTCAGCCTTGGCCTGAAAAACAGAATTTGCACTTATCCTTAAACATGCTTAACTTTAAGCCACTTGATACAGAAGCGATTCTTTTTTTCTGAGCCCGTGTCATGTGAGGAGACGCACCCTTCTAGAAAAACAGCCACTCGGCCCAGCCCTCAGAAGGGACCCAGTGCCGGGGAGACACGGACGCCTTTTTCCCTGTGGTCTGGGCGCTCAGTGTTCATCACAGCCAGGCTCTGACCTGGGCTCGTTTTCACCACACCGTCTACTCAGCAGTTCTATTTATATCAGCACATCCGAGCGGGGACTGCCATTCCTCAAGGACATTGACGCTATTGGAAAGGTCTTAATTCCAAGCCCGAAAGGGATCATCAGCACTACACGCCAGGGGACTCAGTTTCAGCAACTGGCTGTCTAGACACATTTCAGATGGTGATTTTTAAGATGCATGCTAAACGTGTGATCTTTTGTTTCCTCCAATGATTTGTAATATACATTTTAAGACTGGAAACTTTTTTGTACAACATCCAATAAAACATTTTGGTTTTAAATTCTG EMBV3_43337 TATGGAATCTCTGTGGCCTTTTCAGTGATGGTACTGGACCTTGGGCTCATAGCCACATCC Gene GeneID:526311|LOC526311:XM_002693344:253_cdna Constitutive 0 NULL GeneID:526311 15 GENE LOC526311 NULL similar to rCG39757 EMBV3_31997 GCGCTTTTCGCCCTACGCTTTCAACGGAGGAACAGACAAAACAGTCATTGGATGTAGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14407 TCCTCTGTATTCTATACTGCTGTGGTGCCCATGCTCAACCCATTAATCTATAGCCTGAGG Gene GeneID:782797|LOC782797:XM_002699209:109_cdna Constitutive 0 NULL GeneID:782797 29 GENE LOC782797 NULL similar to olfactory receptor 877 EMBV3_14572 GTATGTGGCCATTTGTCACCCACTGAGATATAGTGTTATCATGAGCCCCCGCCTCTGTGG Gene GeneID:526508|LOC526508:XM_002688790:179_cdna Constitutive 0 NULL GeneID:526508 7 GENE LOC526508 NULL similar to olfactory receptor, family 7, subfamily G, member 2 EMBV3_03757 CTGTATTCAGCCAAGGTTATGGGGCCAGGGCAAGCAGCTCAGTTTAGAAACACACAAGTG Gene GeneID:522919|GNPDA1:NM_001080287:241_cdna UTR3_Alt 2 NULL GeneID:522919 7 GENE GNPDA1 GNPI glucosamine-6-phosphate deaminase 1 EMBV3_31528 CAACCTGTTTGGCCGAGGCATGGACATCGAGCGGGTGAACATTGCCTTTAACTACGACAT Gene GeneID:540191|BAT1:NM_001033629:189_cdna Constitutive 0 NULL GeneID:540191 23 GENE BAT1 MGC127051 HLA-B associated transcript 1 EMBV3_24539 TTCCTAGAAGAATGTGTATATGACAGCGGCAGGCCCGCTCTCAAGGAGGGAACTCTGGAA Gene GeneID:100335287|LOC100335287:XM_002696935:493_cdna Constitutive 0 NULL GeneID:100335287 22 GENE LOC100335287 NULL hypothetical protein LOC100335287 EMBV3_40356 TACCCGCTGCACAGAGCCAGATCTGAGACTCGGCCAGAGTCCGATGGCGGCGGCGGCGCT Variant GeneID:613566|ZNF154:NM_001076277:61_cdna 101^185 1 EMBV3_10992 GeneID:613566 18 GENE ZNF154 MGC152108 zinc finger protein 154 EMBV3_26444 TACGTGCCCAGCAAACAGCGGGACCTGAAGGTCAACCGGCGCAACGTGTTGTCGGACAGC Gene GeneID:510128|CORO1B:NM_001113243:563_cdna Constitutive 0 NULL GeneID:510128 29 GENE CORO1B NULL coronin, actin binding protein, 1B EMBV3_07846 ATTGAAAAGTTCGAGAAGGAGGCTGCCGAGGCTGACTGTGCTGTCCTGATCGTTGCTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28800 TGGGGGAGAGTTGTTATAAATGACTGATGTATCACAACCTTCTATACCTCGGTCTGTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08456 ATCGAATCTGTGTTCTCTCCATTGGCAGGAGGATTCTTAACCACTAGGCCACCAGGGGAG Gene BVV0102_112470 - 1 EMBV3_14176 GK000002.2:90090702-90139394 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33354 CCGCTTTATCTCCAAATCCGTTCGAGTGTTTATCACCTACCTTCTAGGAGCTTCAGCACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15159 CTGTTGGTTTCTTTAAGCAGGAAACACTGAGAGTGGGGGAGCCAATGAGGCTCTTGTCAG Gene BVT0102_261209 + 0 NULL GK000011.2:97652611-97655479 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00026050 1 XLOC_014913 Coding TCONS_00026050 XLOC_014913 Coding Coding ZBTB34 11:97631337-97654116 o TSS18781 3101 1 TCONS_00026050_2 506 2 0.863947668803231 6.99312882916192e-11 4.28491645834253e-05 4.52363594185237e-05 4.55508736769775e-05 1.20441389351539e-05 1.08427989947064e-05 6.06674805013794e-05 5.7219519387247e-06 0.000269703854088165 0.000158809212680721 2.93739748597565e-06 3.11330129912378e-05 7.50270696378254e-12 3.00642630571389e-05 1.42380118633913e-05 0.00294692632168299 9.94939420082048e-05 0.000695844802521238 0.000351492240548321 1.74145634316661e-05 1.85027959741354e-06 0.000410323729508815 0.00309153901266189 0.00127586464475958 1.98934271186152e-05 8.40182160035619e-07 3.05930030247984e-11 6.19489005343626e-06 5.94889996321615e-05 5.42860439209699e-05 XM_005213167.1 ZBTB34 PREDICTED: Bos taurus zinc finger and BTB domain containing 34 (ZBTB34), transcript variant X2, mRNA. 0.0 5593 100.00 0.999677523379555 NM_001099270.1 ZBTB34 Homo sapiens zinc finger and BTB domain containing 34 (ZBTB34), 0.0 4237 90.46 0.999032570138665 TCONS_00026050_2 sp|Q8NCN2|ZBT34_HUMAN ZBT34_HUMAN Zinc finger and BTB domain-containing protein 34; 0.0 979 96.81 0.990118577075099 6 coding 0 0 0 0 -0.0538352288640159 0.712203350900973 0.00834520516271857 0.868293299152161 CTGGCGCCGGCGGCGGCGGAGGGGGCGCCGCGGGAGGGCGATGTGAGCGCGGCGCTCTCGGCAGATTACGCTTCATGTCAGTAGAAATGGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGAGTACAGCAGCACCGTCCTGAGCCAGCTAAACGAACTCCGCCTGCAAGGAAAACTATGTGACATCATTGTCCACATTCAGGGTCAGCCATTCCGAGCCCACAAAGCCGTCCTCGCGGCCAGCTCCCCCTACTTCCGGGACCATTCAGCACTAAGTACCATGAGTGGCTTGTCAATATCAGTGATTAAAAACCCCAATGTGTTTGAACAGTTGCTTTCATTTTGTTACACTGGAAGAATGTCCTTGCAGCTGAAGGATGTTGTCAGTTTTCTGACGGCAGCTAGCTTTCTTCAGATGCAGTGTGTCATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATTCAAAAATCAGTGTGGGAGATGTGGACTCCGTGACCGTCGGTGCAGAAGAGACCCCGGAGAGCCGCAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACCCGGTGGAGATCTCCCCGCCATACTGCTCTCAGGTACGGCAGCCCACCACAAGCAGCGATCTTCGGATGGAGACCACACCCAGCAAAGCTCTGCGCAGCAGCCGTTTACAGGAGGAAGGGCACTCGGACCGAGGGAGCAGTGGGAGCGTCTCCGAGTACGAGATCCAAATCGAGGGGGACCATGAGCAAGGGGACCTGCTAGGGAGGGAGAGCCAGATCACCGAGGTGAAAGTGAAGATGGAGAAGTCCGACCGGCCCAGCTGTTCCGACAGCTCGTCCCTGGGAGACGACGGGTACCACACCGAGATGGTTGATGGGGAACAAGTCGTGGCCGTGAACGTGGGTTCCTATGGTTCTGTGCTCCAGCACGCCTATTCTTACTGCCAGGCAGCCTCACAGCCGGCCGGTGGTGTATCTGAGGCGTTCGGAAGTCTGAGTAACTCCAGCCCCTCCAGATCCATGCTGAGCTGTTTCCGAGGAGGACGGGCCCGCCAGAAGCGGGCCCTGTCCGTCCACCTGCACAGTGATCTGCAGGGCCTGGTGCAGGGTTCCGACAGCGAGGCCGTGGTGAGTAACCCAGGCTTCGAGAGTAGCCCACGGGAGAGGAGCGCGCGAGGTCACTGGTACCCGTACAACGAGAGGTTGATCTGCATCTACTGCGGCAAGTCCTTCAACCAGAAGGGAAGTCTTGACAGGCACATGCGACTCCACATGGGAATCACGCCCTTTGTATGCAAGTTCTGCGGGAAGAAGTACACGCGGAAGGACCAGTTGGAGTACCACATCCGGGGCCATACCGATGACAAGCCGTTCCGCTGTGAGATCTGCGGGAAGTGCTTCCCTTTCCAAGGCACCCTCAACCAGCACCTGCGGAAAAACCACCCCGGCGTGGCAGAAGTCCGCAGTCGCATGGAGTCCCCCGAGAGAACAGACGTGTATGCGGAACAAAAACTAGAAAACGATGCCTCGGCCTCAGAGATGGCCCTGGATTCCCGGATGGAAATTCACACGGTGTCCGATGCTCCTGATTAAGATGGTAAAAAAAAAATAGTGCACCCACGCAAAGCACATTAATCAATGCCTATTTGTGATTTGCTTTGTTGTCATCTTTGGTTTTCCCAACCATCTGGAAATCTCTTGGTCTCTTGGCAGTTTTTCTAAGGTTTCTGGAAGGAACACTCCATGGTGTTTATCCTTTCCCGCCCCCCCGCCCTCCCTTCCCCAAGGAGCTCAAAGCATGAAGGGCAATGTATCCAGGGAAAACAGGCTGACAGTATTCCTCTTTGGCCGAACTCTTCATCCAAAATCTGCCAGTGATTTAGCTATGCCAATTGGTCGACCCTCCGTCTCTGCCAAGAGGCATACTCTCTCATTGTGTGCACTGGCGCCAGTGCATTTCCATGGAGAGAGACTGGGATGCCGTCAGCTGATACAAATGGGTAACCTTTTCTAATTTAAAATTACTTTTAGGGGGTAGTTAGACAATTTATATATATATATAATAAAGCGATTATTATATATATAGTATATATACATTCTCAAATTTGATTTTATTCTGGTTGAGGTGAATGTAAGAGGAATATATAATTTAATACAATGTGAACAGGGCTTTGGACTCTGTCTCGTCCCTACCTAATATGTTAGGGTTTTGCCCCTTTATTTCCCTTATGAAAGAATGTTAATAGGTTTTCATATATATATTAATCATTGTGTCCAAAAGCAAGCAAAGCAAATCACAGTGTTCATAGCTCTGCTTCATAACAAACACATAAACCAAATGCCATAAAACGTATTCAACTCTAGTTGGAAACCATTTGGAATTTTGTTAGTTGTCCAGTTAGGTAAGCTGGATGACCCGTGGTGCTGACCTTTTTACATAATGTAGTGTTATATTAGCCAACCCCAAAGGAGCAGTGGTTTTCAATGTTTTTACTGGCCTCTGAATCTACCTTCATTCCGTACTGTAGAAACACACACACCAGGTAACTAAATCGAATCACTCTACCGTGAGTTAGTACTCGCAGTAAAGGAAAGGAATTTGTAGTTCTGTCTACAAAACTCTACAAGCAGTGTTGTGGTTTTTTGTTTTTGTTTTTGTTTTTAAACCTTCTTTCTCTTTTCAAACAGCCAGTTCAGGTGCACAGCAACTTTTTCTACATGCAGTTCCCAGGGAAACTGCAGAACTTGGAATTTGTACTTTTTGTAAAGATATACTCTATGGGAATTGCAAGCAATATATCTATCTTAGTATTGTGTGTGCTGACAAGAGCCTCATTGGCTCCCCCACTCTCAGTGTTTCCTGCTTAAAGAAACCAACAGTTAAAAAGCCCTCTAAGATACTCTGTGTGTCACCAAATCTCTGTGTGTCACCATTTTTTTGGTCACGTGGTGCTATTTTTTATGTTATGTATCTTTTAGGTCAGTATAGTTGTAGAAAATGTGAAATGTAATGGTAAAAGTGAATTACAATTTTTTTTTCCCCTTTCCTGAGTTTATAGCTTGAAAAAAGACCTCAAAAGCATGTGCTGGCAAACACAT TCONS_00026052 s 5' 0 TCONS_00026052 s 5' 19764 EMBV3_03610 TCTGATCCCAAGCCTGGAGGGGCGGTTTGAAGATGAGGAGCTACAGCAGATTCTTGATGA Gene GeneID:617422|POLR2D:NM_001076458:51_cdna Constitutive 1 NULL GeneID:617422 2 GENE POLR2D MGC140544 polymerase (RNA) II (DNA directed) polypeptide D EMBV3_23283 GGGTGCACTCCTTGGGGAATGGTTTGGGCCAGATGGGGTCTATATGGAGTGGAATATTTG Gene GeneID:528123|GPR177:XM_002686321:92_cdna Constitutive 0 NULL GeneID:528123 3 GENE GPR177 GPR177 G protein-coupled receptor 177 EMBV3_43782 GGCCTCCATGCTGTCGCTGACATCCATTGTGAAAACTGCAAGACCACTTTGGGCTGGAAA Gene GeneID:787498|YPEL3:XR_082723:15_cdna Constitutive 0 NULL GeneID:787498 25 GENE YPEL3 NULL yippee-like 3 (Drosophila) EMBV3_38116 AAAGTGAGATGATTCTGTGGTACTCAGAGGCTGGGGTTAGTGTAGCTGCTTCTGGCGGTG Gene BVT0102_013231 - 1 EMBV3_10709 GK000015.2:44158852-44175365 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059184 TCONS_00059187 TCONS_00059189 TCONS_00059186 TCONS_00059191 TCONS_00059185 TCONS_00059182 TCONS_00059178 TCONS_00059183 TCONS_00059190 TCONS_00059188 TCONS_00059192 1 XLOC_036278 Coding TCONS_00059187 XLOC_036278 Coding Coding SCUBE2 15:44090650-44159802 = TSS44435 4114 1 TCONS_00059187_11 970 22 0.940825150757039 5.33329396024975e-31 2.59768319621091e-09 1.11012777111897e-41 3.64205405791947e-05 3.1025085377507e-40 3.24983002985285e-26 2.91719815627945e-11 2.84805359277237e-11 2.75716156046844e-14 1.22497788842591e-35 3.01127435214128e-12 1.96700710727531e-82 1.33108359545752e-14 2.45090971947719e-11 2.57532252797495e-11 6.27207298686866e-35 0.00116263088275292 0.00180432178500154 6.6189678236296e-38 7.52979310245112e-57 1.19215059508671e-27 9.37879213989041e-19 1.81095065970579e-12 8.60568943927224e-28 1.17335509997518e-34 3.56136968632042e-22 5.24549774777011e-35 9.55123928984765e-62 1.15875431417552e-14 3.11731716762675e-15 XM_608409.6 SCUBE2 PREDICTED: Bos taurus signal peptide, CUB domain, EGF-like 2 (SCUBE2), transcript variant X2, mRNA. 0.0 5705 100.00 0.768595041322314 NM_020974.2 SCUBE2 Homo sapiens signal peptide, CUB domain, EGF-like 2 (SCUBE2), 0.0 4819 85.87 0.996596985901799 TCONS_00059187_11 sp|Q9NQ36|SCUB2_HUMAN SCUB2_HUMAN Signal peptide, CUB and EGF-like domain-containing protein 2; 0.0 1699 83.27 0.998969072164948 0 coding 1 1 1 1 0.0707319494032161 0.540024818840644 -0.0335045692917758 0.681929124230138 CGGGCAGAGCGCCCGCACACACCTCCCGGAGCCGCCGCCGCGCTCGCCGCCCGCGCTCCCCTGCCTCTGCCCGCAGCCGCCGCGCCTGCCATGGGGGTCGCGGGCCGCGGCTGCCCTAGGGCTGCCCCGGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGACGGCGGCCGTCCCGCCCTATCGGGGCCGCGCAGAGGGGCCGCCGGAGGATGTGGACGAGTGTGCCCAGGGGCTAGATGACTGCCATATCAATGCCCTGTGTGAGAACACACCCACCTCCTACAAGTGCTCCTGCAGGCCTGGCTACCAAGGGGAGGGCAGGCAGTGTGAGGATATTGATGAATGTGAAAATGAACTCAATGGAGGCTGTGTCCATGACTGTTTGAATATTCCTGGCAATTATCGCTGCACTTGTTTCGATGGCTTCATGCTGGCTCATGATGGTCATAATTGTCTCGACGTGGACGAGTGCCTGGAGAACAATGGCGGCTGCCAGCACACCTGCCTCAACGTCATGGGGAGCTACGAGTGCCGCTGCCAGGAGGGCTTTTTCCTGAGTGACAATCAGCACACGTGCATTCACCGCTCAGAAGAGGGTCTGAGCTGCATGAATAAGAATCACGGCTGTAGTCACATCTGCATGGAGGCCCCGAAGGGCAGTGTCGCCTGCGAGTGCAGGCCAGGCTTTGAGCTGGCCAAGAACCAGAGAGACTGCATCTTGACCTGTAACCATGGAAACGGTGGATGCCAGCACTCCTGTGAAGACACCGCTGAAGGCCCAGAGTGTAGCTGCCATCCTCGGTACAAGATGCACTCGGATGGGAGGAGCTGCCTCGAGCGAGAGGACATTGCCCTGGAGGTGATGGAGAGCAACACCACGTCCGTGGCAGATGGGGATAAACGGGTGAAACGGCGGCTGCTCATGGAAACGTGTGCTGTCAACAATGGAGGCTGTGACCGCACCTGCAAGGATACTTCAACAGGGGTTCATTGCAGTTGTCCCGTCGGCTTCACGCTCCAGATGGATGGAAAGACCTGTAAAGATATTGATGAGTGCCAGACGCGCAACGGAGGGTGTGATCATTTCTGCAGAAACACCGTGGGCAGTTTTGACTGCAGCTGCAAAAAGGGATTTAAATTATTAACAGATGAGAAGTCTTGCCAAGATGTGGATGAATGCTCTCTGGATAGGACCTGTGACCACAGCTGCATCAACCACCCGGGCACCTTCACATGTGCTTGCAGCGAAGGGTACACCCTCTATGGCTTTACCCACTGCGGAGACACCAACGAGTGCAGCGTCAACAACGGAGGCTGTCAGCAGGTCTGTGTGAACACTGTGGGCAGCTACGAATGCCACTGCCACTCTGGGTACAAGCTCCACTGGAATAAAAAGGACTGTGTGGAAGTGAAGGGGGGCCTGCCCACTAGCCTGTCACCCCACGTGTCCCTGCAGTGCGGTAAAAGTGGTGGAGGAGACAGGTGCTTCCTCAGATGTCACTCTGGCATTCACCTCTCTCCAGGACTGCAAGAGGCCTATTCTGTCACCTGCGGCTCTTCCTCTCCTCTCAGGAACAAACAGCAAAAATCAAATGACTCCGCTTTCGGGGATGTCGCCACCGTCAGGACAAGTGTAACCTTTAAGCTAAATGAAGGCAAATGTAGTTTGAAAAAGGCTGAGCTGTTTCCTGAGGGTCTGCGACCAGTCCTCCCAGAGAAGCACAGCTCAGTAAAAGAGAGCTTCCGCTACGCAAACCTTACATGCAGCTCTGGCAAGCAAGTCCCAGGAGGCCCTGGCCGACCGAACGCCCCTAAGGAAATGTTTATCACTGTTGAGTTTGAGCTTGAAACTAACCAAAAGGAGGTGACAGTGTCTTGTGATCTCAGTTGCATTGTAAAGCGAACAGAGAAGCGGCTCCGGAAGGCCATCCGCACTCTCCGAAAGGCTGCCCACAGGGAGCAGCTGCACCTCCAGCTCTCAGGCGTGAACCTTGAAGTGGCTAAAAAGTCTCCCCGAACATCTGAACGCCAGATAGAGTCCTGTGCAATGGGCCAGGACCATGGAGGAAACCAGTGTGGTCTGTGCCAACCAGGTGAATACTCTGCAGATGGCTTCACACCCTGCCAGCCTTGTGCCCGGGGCACATTCCAGCCTGAAGCCGGCCGCACTTCCTGCTTTCCCTGTGGAGGGGGCCTCCCCACCAAACACCCTGGAGCCACTTCCTTTCAGGACTGTGAAACCAGAGTTCAGTGTTCACCTGGACATTTCTACAACACCACTACTCACCGATGCATTCGTTGCCCAGCAGGAACATACCAGCCAGAATTTGGAAAAAATCATTGTGTTTCCTGCCCAGGAAATACCACGACTGACTTTGATGGCTCCACAAACATAACCCAGTGTAAAAACAGAAGATGCGGAGGGGAGCTGGGTGATTTCACCGGGTACATCGAATCCCCAAACTACCCAGGCAATTACCCAGCCAACACAGAATGTACCTGGACCATCAATCCACCCCCTAAGCGCCGCATCTTGATTGTGGTCCCTGAGATCTTCCTGCCCATAGAGGACGACTGTGGCGACTACCTCGTGATGCGGAAAACTGCTTCATCCAATTCTGTGACAACATATGAAACCTGCCAGACCTACGAACGCCCCATCGCCTTCACCTCCAGATCCAAGAGGCTGTGGATTCAGTTTAAGTCCAATGAGGGGAACAGCGCCAGAGGGTTCCAGGTCCCATACGTGACATACGATGAGGACTACCAGGAGCTCATTGAAGACATAGTTCGAGACGGCAGGCTCTATGCATCTGAGAACCATCAGGAAATACTTAAGGATAAGAAACTGATCAAGGCCCTGTTTGATGTCCTGGCCCACCCCCAGAACTATTTCAAGTACACAGCCCAGGAGTCCCGCGAAATGTTTCCACGATCCTTCATCCGATTGCTCCGTTCCAAAGTGTCCAGGTTTTTGAGGCCTTACAAATAAGACTGCCCACGTGCCACTTGACACAGTGTTCGGCCTGTGGGCTGGCAGGACATGGCCATCTGCTTCTGCAGCCAGCATAGATGGATAACGCTGCCTCTAGTAGCAGTGACTGGTTAGAGTTCAATTTTTATAGATAATACAGGTATTTTGGTAAATTGAACTTGGTTTTTCTTTCCCAGTGTTATAGGTGTGGACAGAGAATGGGTTTGAGTCTTACCCGCTTCTCAATGGTGTGGGCAGCCGACTTGGGTACATCAAGGGCTGGCTGAGCTGGGTTTCAGTCAGCTTAGGTGAGACTCACCTGTCCTTCTCGGTCCTCACTTCTCCTCGAGGGGGCTGCCTTGTCTGAAACTTCAGCTTCTTCCAGCATAGCCCTCCCTAAGGGAGCCCTTTATACTCGGGTGTTGGCTCTGACCAGGCAGAGCAGGAAAGCGGGGAGGAAGGGAAGGGGAGTCCTCCAGACACCGTCCACCTCCCCCCGATCCGAGACCTGGGAGGACCCGGTTTTCTCCACAGCCTTCTCCGGTCTGTGTGACTTAAATTTGATCCCAGCAGCTTGGATTCCAAGCAGTGATCACCAAAAAATACTTAAAGCAGAAAGAATTAGAAATAAGAAGGTAGAAACTCAGCACTTCCACAGACATCATAATGTGGACCTGTTGATGACCTTCCATGTTGCCAGTTTCCATCTCGTAGCAAATGCTCTGTGCTTGTCTTACACCTGCAGCTGTGCCTTCAGGGCACTGCTCTTCTGGGCACCGAGGTAGGGCCTGGACAGTTCAGATCCGATGTGATCTGATGGATGTGACTCCATCCATCATGAAAAGGAGATTCCCACACCCTGAGTCAGTACCACCAAGGGTCCTCCTTCCAGCTGGGCTTCCCACCATGGGGCGGTGGAGGTCCAGGTGGAGGTGGTATGGCCCGGCCTGTCATGCTTGCCTTCCTTCCCCCGCTCCAAGCTCAGAGACTGACTGAGGGCCTGAGCTGCACGGCTCAGGGTGGCCTCACTCCCTTAATGGTCACACCACCGCCAGAAGCAGCTACACTAACCCCAGCCTCTGAGTACCACAGAATCATCTCACTTTCAGTCAACACAGTGGGACCTCAG EMBV3_07023 CAGTTATGGACAATCATGTGACTCCACTCAAATCTCCTACTCTTGTTGGGTTTCACCTGC Gene BVT0102_403628 + 0 NULL GK000030.2:5940885-7179157 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246216 TCONS_00246214 TCONS_00246217 TCONS_00246215 TCONS_00246212 TCONS_00246213 1 XLOC_150931 Coding TCONS_00246215 XLOC_150931 NonCoding Coding - X:6967261-7001990 - TSS184651 893 2 TCONS_00246215_2 65 0.743561030235162 4 0.974401059663672 1.47682136803497e-28 2.5427923367181e-93 1.62153860883248e-55 6.85939177942422e-07 0.000583780065772614 2.9993723245246e-148 8.51428075851139e-05 1.03316379447923e-05 2.18196097302267e-32 0 0 0 0 1.14348321941668e-72 0 0 0 0 0.000412530990724825 2.25811245496644e-05 3.50464935352225e-09 0 0 0 2.8366603014501e-43 0.000130204269533668 1.31114355443152e-26 0 0 0 XM_005194808.1 LOC101905230 PREDICTED: Bos taurus uncharacterized LOC101905230 (LOC101905230), 5e-48 196 94.44 0.139977603583427 0 noncoding 0 0 0 0 -0.389967346474671 0.0266063302712036 -0.0864313501657845 0.181372797204959 CATCTCTGCATTTGGCCTGCCGCTGCCGGGATCTTGAATTGAGAGGGCGCAGGCATTCTGTGGTAGGAAATCTGGTCTGAAGTGCCTGGTCTGAGTCCTCTGCTAGGGGCACTCTTGTGAGCGAGTGAAACTAGACTCAGCACAAAGGAAAAGGAAGAAAAGGAAAAGAGGTGGCCAAAGTATTGGAGCTTCAGAACTGAGCCGTGAGACACCTCATCTGGAAGTTGGGAAGAGGAGGTGAGGCCAGCAAAAGATACCAAGAATAAGCTGCCAATGAGGTAGAAGGGGATCTTCCCGACCGAGAGATCGAACCCTCATCCCCTGTGTCTCCTGCATTGGCAGGCAGATTCTTTACCACTGAGCCATCTGGGAAGACTTCAGGCCGTCAGCAGACAGCACCAGCTTAAGAATTGTGGCATGAAACTTGGGCTAAGAAGAGCTACAGTTATGGACAATCATGTGACTCCACTCAAATCTCCTACTCTTGTTGGGTTTCACCTGCATGTTTTATCAGTTACTAAAGAGCAACGTTGTTTCCCACTACATTTCAGTAAGACTCCAGGAGAGCTAGAATGCCGGGCTTCAAATTGGCCCTGACATCTAATAGTTTTGTGATTTTGGGTGAGCTACACTCCTGATGTTTCAGAATTCTCACCTACTTCAGGTAGCTACTGTGAGGATTAAATGGGTTAACACATGCAAAGTGTTTGGAAAAATCCGTGGCACATAGTGTTATTTGCTTTTATAAAAATAAAAGCAAAAATCAGAGATCAGATCAGATCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAATCACAGCACGCCAGGCCTCCCTGTCCATCACCAAATCCCGGAGTTCACTCAGACTCACGACCATCGAGTTAG TCONS_00243680 r 5' 211383 TCONS_00243680 r 5' 177166 EMBV3_27627 CGGAACAACTGATGGGATTCAAGATGAAGGAGGATGTGGTGCTTGGAATTGGGGTGAACG Gene GeneID:534386|EPC1:XM_002692106:328_cdna Constitutive 0 NULL GeneID:534386 13 GENE EPC1 NULL enhancer of polycomb homolog 1 (Drosophila) EMBV3_20815 CAGCGTGTGGTTTCTCAAGAGGCCAGAGCGGCATTATGGGGTGATTTTTTTTACTGGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33745 TATCTGTGTGGCCAGTGTGGGAAAAGCTTCACTCAGAGAGGGAGTCTGGCTGTGCACCAG Gene GeneID:512392|ZNF32:NM_001046119:20_cdna Constitutive 0 NULL GeneID:512392 28 GENE ZNF32 MGC137421 zinc finger protein 32 EMBV3_43254 GGCTGTGAAGATTACCCATGAGTTCCCTCAGTTTTTTCCTTTGGGAGTCGTGCAGTATGG Gene GeneID:512754|RPA3:NM_001034427:26_cdna Constitutive 0 NULL GeneID:512754 4 GENE RPA3 MGC128567 replication protein A3, 14kDa EMBV3_06255 AGAACAGTCTTCATGATTGGCTTCCTGTGGTTGCATCTGACAAGGAGACTTATGAGCTTC Gene GeneID:781924|LOC781924:XM_002696421:7_cdna Constitutive 0 NULL GeneID:781924 20 GENE LOC781924 NULL similar to Ribosomal protein L22-like 1 EMBV3_28120 GCAGCAAAAAAGTTACCTGGTCTGGCTGTTTAGCAGAATTTACCTCTACTCATTCATCAG Gene GeneID:514345|MCOLN3:XM_002686287:142_cdna Constitutive 0 NULL GeneID:514345 3 GENE MCOLN3 NULL mucolipin 3 EMBV3_14101 TTTCAAAGGGCGGACATAAAGACAGGACGGAGAAACAGGCTCAAAAGCCACGGGACCTGA Gene BVT0102_132920 + 0 NULL GK000016.2:41985757-42038916 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067245 1 XLOC_041387 Coding TCONS_00067245 XLOC_041387 Coding Coding DHRS3 16:41997891-42002572 = TSS50607 655 1 TCONS_00067245_1 36 2 0.860470085470086 0 0 0 0 0 0 0 0 0 0 6.98986461636779e-06 0 0 0 2.1846917930306e-06 0.00330648693323735 0.00144477956910258 0.00118750840344156 0 0 9.26938456816438e-06 0.00159742769930823 0.000560246424786424 0.00115176904553606 0 0 0 2.93287891248979e-05 4.44696894113284e-05 0.00118408675819406 NM_174180.3 DHRS3 Bos taurus dehydrogenase/reductase (SDR family) member 3 (DHRS3), 0.0 1168 99.85 0.990839694656489 NM_004753.4 DHRS3 Homo sapiens dehydrogenase/reductase (SDR family) member 3 (DHRS3), 0.0 720 85.56 0.989312977099237 TCONS_00067245_1 sp|O75911|DHRS3_HUMAN DHRS3_HUMAN Short-chain dehydrogenase/reductase 3; 1e-18 76.6 97.22 0.972222222222222 0 noncoding GCATGCAGGTTCCCCAATCTCTTCCCCCCACTGAAGCCGGAGACGGTGGCCCGGAGAACAGTGGAAGCTGTGCAGCTTAACCAGGCCCTCCTCCTGTTGCCGTGGACAATGCATGCCCTCATTATCTTGAAAAGCATACTCCCACAGGCTGCCCTCGAGGAGATCCACAAATTCTCAGGAACCTACACCTGCATGAACACTTTCAAAGGGCGGACATAAAGACAGGACGGAGAAACAGGCTCAAAAGCCACGGAACCTGAGGGGGCACGGGCACCTGGGCACACGCCTACATGCCTGTCCCTCAGCACACTTCTGCTGGGTGAGCAGGACTGCTTCTATCCTGGGGAAGAATCCGGCTGCCCCCCTAGCCAGCCCCAGGACCTTTGCACAGGACTGATGGGCATAACTCTGACCCCCATGGGGAGGCAAGAAATCAGCCAGCAGCTGCCTTGACACTTTTGTACATTTCTGATTCTGTAGAGTTTATTGTTAAATCGCTTCTCAAGTCTAACCAGCCTTGGCAATGTGCATAGACTATTTCCGGGATGGTCTGTGCCCACATGCTCCTCCTTCGCCTCCAAAATTCACTCATCCTCAGCTTGTGCAAACTGGTTGAACGGCAGGAATATATAAAATAAAGAGAGAAAGCTTTTGC EMBV3_11785 CACCCCTGACACAGCAGAGTTCAGTCGAGAATTCCAGTTACACCAGCACCTTTTTGATCC Gene GeneID:508224|SCG5:NM_001045998:40_cdna Constitutive 1 NULL GeneID:508224 10 GENE SCG5 7B2 MGC128496 Sgne1 secretogranin V (7B2 protein) EMBV3_11669 TCTGCCTGAGGTCAGGAGGCAATGTGCCTTAGACAAAAGCTCAGGTGAGAGACTAAGATG Gene GeneID:282094|TIMP3:NM_174473:5_cdna Constitutive 0 NULL GeneID:282094 5 GENE TIMP3 MGC137089 TIMP metallopeptidase inhibitor 3 EMBV3_00854 TTCCTGGATGCCTTCTACTTCTGCTTCATCTCTCTGTCCACCATCGGCCTGGGTGATTAC Gene GeneID:785418|KCNK6:XM_002694968:124_cdna Constitutive 0 NULL GeneID:785418 18 GENE KCNK6 NULL potassium channel, subfamily K, member 6 EMBV3_36122 GGACCTGACAGGCAGTCCTATGGGGATTAAAGAAATCAGGAGTGATAAAGAAGCCACCAC Gene GeneID:100140934|LOC100140934:XM_002694031:37_cdna Constitutive 0 NULL GeneID:100140934 16 GENE LOC100140934 NULL similar to mCG22324 EMBV3_01310 TTTGAGTGAATCGACAGTCCCATCCCCAGGCTCTTGAACTCACGTGTGCTATCCGTGTGT Gene GeneID:282195|COL9A1:XM_002690002:16_cdna Constitutive 2 NULL GeneID:282195 9 GENE COL9A1 NULL collagen, type IX, alpha 1 EMBV3_27608 TGCTCCTAGCCTCGCACCTCTACCTGGTGGCCAGCAACACCACCACCTGGGAGTTCATCT Gene GeneID:505354|LOC505354:XM_002691635:330_cdna Constitutive 3 NULL GeneID:505354 11 GENE LOC505354 NULL similar to zinc finger, DHHC domain containing 12 EMBV3_13071 TCGGCCCTCCTCGGGCTTCCCTGTTCTCATGAGCTTCCCATTTGACAACGACGATGGTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01151 AGCATGGGGTACCCCAAAGTGAAAACGGTAGTCACCCAGGGCAGTTCCATTTTTGAGAAC Gene GeneID:506601|RCAN3:NM_001045945:84_cdna Constitutive 2 NULL GeneID:506601 2 GENE RCAN3 DSCR1L2 MGC137632 RCAN family member 3 EMBV3_20634 CTCCACTTGCTCTTCCCACATCACTGTTGTACTTTTATTCTACGGATCAGCCACTGTCAC Gene GeneID:787428|LOC787428:XM_002693627:167_cdna Constitutive 0 NULL GeneID:787428 15 GENE LOC787428 NULL similar to olfactory receptor Olr555 EMBV3_25597 AATTCCGTGCTTTCACTCTGGCTCAAAGGGCCACCTCCATCCCCAACCTGGAGAGATTAA Gene BVT0102_049715 + 0 NULL GK000020.2:37460211-37596581 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43446 ATGCACCACAACTAGAGAAAGCCTGCAAGCAGCAATGAAGACCCAGCACAGCCCGAAACA Gene BVV0102_304136 + 0 NULL GK000029.2:28645193-28699640 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37042 TCCAGGCGGCGCGGAACGGAGTTGCTAACGGCCTATGGGAGGCCACATGCCAATGATGCC Variant GeneID:614553|SNRPC:NM_001076334:158_cdna 43^427 3 EMBV3_08489 GeneID:614553 23 GENE SNRPC MGC134384 small nuclear ribonucleoprotein polypeptide C EMBV3_36740 TGTCTCTGTACATCCTCTATGCGGGACAGTACAAATTTGCAGGACATGCTCCAGTAACAC Gene GeneID:514137|MGC165846:NM_001101988:77_cdna Constitutive 0 NULL GeneID:514137 X GENE MGC165846 MGC165846 hypothetical LOC514137 EMBV3_13991 GAAAGCGGATCTCCCCGCCGGCTGAGGCAGGTTGTTTTGTGGAAATGAAGGTTTGAGGAC Variant GeneID:613923|DYM:XM_002697764:301_cdna 263^364 1 EMBV3_20503 GeneID:613923 24 GENE DYM NULL dymeclin EMBV3_42348 CCAGAGGAATGACGACGCTGTGTTCTGCCTTCATGCATCCCACCTCTAATCTACAGACCA Gene GeneID:493717|NLRP5:NM_001007814:16_cdna Constitutive 0 NULL GeneID:493717 18 GENE NLRP5 MATER NALP5 NLR family, pyrin domain containing 5 EMBV3_10050 AGGAGATGATGACGTCTTTGTCCATATCCCCAATGTGCTGGAGTTCCTGGATGGCTGGGA Gene GeneID:534619|B3GNT4:XM_002694487:345_cdna Constitutive 0 NULL GeneID:534619 17 GENE B3GNT4 NULL UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 EMBV3_34968 TGTTGGCTTTGGGAACCTGGAGGATGAGTTTTGGCTGGGGCTGGACAACATACACAGGAT Gene GeneID:526409|TNR:XM_002694155:560_cdna Constitutive 0 NULL GeneID:526409 16 GENE TNR NULL tenascin R (restrictin, janusin) EMBV3_25389 CTGAGATGGGGTTGTGTTATGAATGAGCTTTTCTGGTTGAAAGTGTTGCTTGAGGACCAC Gene GeneID:541024|YTHDC2:XM_002690405:69_cdna Constitutive 0 NULL GeneID:541024 10 GENE YTHDC2 NULL YTH domain containing 2 EMBV3_29802 GTCTCTCTGTCGAGAACGCATCTGGTAGCACATAACATCAACGTGGATAAACACGGCCAG Gene GeneID:785083|OBP:XM_002700469:1_cdna Constitutive 0 NULL GeneID:785083 X GENE OBP NULL odorant-binding protein EMBV3_26744 CCCAGGCTCCTGGCCTCTGTTGAGTCTCAGAACAAACACCACGTTTGGAAGGGTGTGTAT Gene BVT0101_072320 + 0 NULL GK000007.2:22121793-22128043 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00582 AATAATCAAAAAAGTGGCTGAGGTGGCTTTGGATAAGGGCTGCTCCCAGTTACGCCTGGC Gene GeneID:359722|SAT2:NM_203323:448_cdna Constitutive 0 NULL GeneID:359722 19 GENE SAT2 MGC152161 SSAT2 spermidine/spermine N1-acetyltransferase family member 2 EMBV3_37345 GTCAGTGGCACAAATGTGAAAATGCAGATAGTTCGCCTAAGAACAGAGGATGGACAGCGG Gene GeneID:540582|SBNO1:XM_002694566:607_cdna Constitutive 0 NULL GeneID:540582 17 GENE SBNO1 NULL strawberry notch homolog 1 (Drosophila) EMBV3_03389 CTCTGTCCTGCAAGCCCTGCAGGGAGAAGGGGCCCTGGCCCACAGGGAACACAGCAGTGT Gene GeneID:512526|PYCRL:NM_001014906:71_cdna Constitutive 0 NULL GeneID:512526 14 GENE PYCRL NULL pyrroline-5-carboxylate reductase-like EMBV3_14946 AGATAATTTTTTATTTCAGTATAGTTTACACATTGCCAAATGGAATAGATTGTACATTAA Gene GeneID:615627|TMEM50B:NM_001034786:58_cdna Constitutive 2 NULL GeneID:615627 1 GENE TMEM50B MGC127178 transmembrane protein 50B EMBV3_29152 GAAAAGTGGTAAACGTATGGCAGATGGTGGCCCAGGAGGAACACTAGAGAGATGGAGACC Gene BVV0102_021141 + 0 NULL GK000006.2:18568781-18740228 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204602 TCONS_00204603 TCONS_00204605 TCONS_00204599 TCONS_00204606 TCONS_00204598 TCONS_00204600 TCONS_00204601 TCONS_00204609 TCONS_00204604 TCONS_00204607 1 XLOC_124487 Coding TCONS_00204609 XLOC_124487 Coding Coding SGMS2 6:18558460-18640096 j TSS153038 918 1 TCONS_00204609_2 192 4 0.988803821890121 0.0652328066026385 0.0981444936583178 0.0770447649699662 0.0625520006579452 0.0841485941757661 0.0305606641599376 0.0450327348635033 0.0533484011033896 0.0668716421141692 0.0110166024836688 0.00437142326658797 0.00193148826881467 0.0110974448233648 0.0287951370182822 0.0208145556506492 0.0018871238190416 0.00010371055579664 0.000203146436708577 0.0752134231596991 0.076986688905109 0.0275567912336673 0.000635449893228437 0.00120681823967491 7.14578012431321e-158 0.0635393893644904 0.0740013640730232 0.0385456058592502 0.00080196094974571 0.000494471818038039 0.000392182169453959 XM_005207617.1 SGMS2 PREDICTED: Bos taurus sphingomyelin synthase 2 (SGMS2), transcript 0.0 1553 100.00 0.93681917211329 NM_152621.5 SGMS2 Homo sapiens sphingomyelin synthase 2 (SGMS2), transcript variant 0.0 1005 87.33 0.892156862745098 TCONS_00204609_2 sp|Q8NHU3|SMS2_HUMAN SMS2_HUMAN Phosphatidylcholine:ceramide cholinephosphotransferase 2; 7e-130 374 93.19 0.989583333333333 0 coding 1 1 1 1 -0.391213083560502 0.0193717795465516 -0.0130011990131535 0.844170518760012 TTCAGCGCACGTAGGTCGGAGCGGACCTGCCTACTTCTATGAGGTGGGATAGTAACATCTTTGGGGGAAAGAAAATTGACTTCCTTTCCTGAAAGTGGTAAACGTATGGCAGATGGTGGCCCAGGAGGAACACTAGAGAGATGGAGACCATCTATGTTTTGCACTAGGAAACAAGATCAGTCTTAAGAGTCCATGTTGATCTTGGAAATAGAAGGATTAAAAAAAGTCAAGTTTCCTCAAAGAACAAGAACTTTACCATCTCCTTTTTGACCTGAAGACCAGGGGACAATGGATATCATAGAGACAGCGAAACTCGAGGAACATATGGAAAATCAAACCAATGACCCTGCAAACACTTACACGAGACCTCCTGAGCCTGTCGAAGAAGAGAACAAAAATGGCAACAGTAAACCTAAGAGCTTATCCAATGGGTTGCGGAAGAGCACCAAAAAGTACCCGGACTACATCCAAATTGCTATGCCCACAGAAGCGAGGAACAAATTTCCCCTTGAGTGGTGGAAAACGGGCATTGCTTTCGTGTACGCTCTTTTCAACCTTGTCCTGACAACCGTCATGATCACGGTTGTGCACGAGAGGGTCCCTCCCAAGGAACTCAGCCCTCCACTCCCAGACAAGTTTTTTGATTACATAGATCGGGTGAAATGGGCATTTTCTGTATCAGAAATAAATGGGATTATATTAGTTGGATTATGGATCACCCAGTGGCTGTTTTTGAGATACAAGTCAATAGTGGGGCGCAGATTCTTTTTTATCATTGGAACTTTATACCTATATCGCTGTATCACAATGTATGTCACTACCCTCCCGGTGCCTGGAATGCATTTCCAGTGTGCTCCAAAGTGTTGACAGTTCGTACCAACCGCACAACCAGAAATTCCTGAAGGTCCACCTCAGATC EMBV3_35385 CGGTTGACTAAGGTGGCAAGGTAGGATGTATTGTGAAGGCAGAAAACCAACAGGGTTTGC Gene BVV0102_335449 - 1 EMBV3_19510 GK000028.2:3274838-3323729 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22939 AGGAGAGTATCCCTGTGGCCAATACCATTGGTGCATCACCCAGAACCCATCAGGTCTCTT Gene GeneID:615129|C13H20orf196:NM_001046552:1288_cdna Constitutive 0 NULL GeneID:615129 13 GENE C13H20orf196 C20orf196 MGC137607 chromosome 20 open reading frame 196 ortholog EMBV3_26663 GCCTAGGGCGCGGGCCCGGGTGGAGCCGCCGCAGGTCTCCAAGGTGAACAGCCTCTGGCA Variant GeneID:100336997|LOC100336997:XM_002685421:9_cdna 128^587 3 EMBV3_18869 GeneID:100336997 2 GENE LOC100336997 NULL hypothetical protein LOC100336997 EMBV3_01908 TGCAGTATTCACACTGGAGCCAGGCCTTATGAATGTGGGCAGTGTGGGAAATCCTTTAGG Gene GeneID:530973|ZIK1:XM_002695492:249_cdna Constitutive 0 NULL GeneID:530973 18 GENE ZIK1 ZNF17 ZNF418 ZNF551 zinc finger protein interacting with K protein 1 homolog (mouse) EMBV3_22661 TGCCTAGGGTGATGTAACATTGGACCAGGAGGCGGAAGACCTAAGGGACCAGATCATTTT Gene BVV0102_125542 + 0 NULL GK000002.2:129091076-129096651 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106807 TCONS_00106810 1 XLOC_062895 Coding TCONS_00106810 XLOC_062895 Coding Coding NIPAL3 2:129037628-129094763 j TSS78529 5449 1 TCONS_00106810_3 406 0.0216553496054322 13 0.904855252564147 9.75228810075221e-16 3.70213731836165e-28 2.35487101971172e-15 2.62156205248483e-15 2.12951326495087e-17 3.45930440159684e-05 1.3303751316849e-17 2.89439402666845e-05 7.81150109486371e-05 6.25180430787311e-15 1.01662568562701e-12 1.47820840000947e-11 4.66602850128737e-06 2.28698525045477e-12 1.01549555040747e-16 0.00149735251167984 1.92213616007162e-17 8.63558771125182e-05 1.67385725945734e-09 1.6868787487661e-14 2.96581635031902e-05 0.000504756797451915 6.4192404183146e-21 4.6475413540368e-05 1.8243213984437e-40 1.57932720771681e-10 1.23279181594431e-17 7.08648907691809e-13 1.24549021682521e-14 1.7563055931089e-14 XM_005203252.1 NIPAL3 PREDICTED: Bos taurus NIPA-like domain containing 3 (NIPAL3), 0.0 9826 100.00 0.999632960176179 NM_020448.4 NIPAL3 Homo sapiens NIPA-like domain containing 3 (NIPAL3), mRNA. 0.0 2248 78.32 0.496054321893926 TCONS_00106810_3 sp|Q6P499|NPAL3_HUMAN NPAL3_HUMAN NIPA-like protein 3; 0.0 753 93.84 0.997536945812808 1 coding 1 0 1 0 -1.75195739039455 0.0189096629572325 0.0256973798032136 0.590125887200215 GTCGGGGAAGGAATTTAGGAGGGCTGTGCCTCCGGCTTGCTCGAGGAGTCCAAGTCGTGTCTCGGAAACCTCTGATCGGTGGGCCTTAACGGAAACGCCGCCGGTTTTACAGCTGAGACTCCCAGAGGCAAAATGATCTGGTCCCTTAGGTCTTCCGCCTCCTGGTCCAATGTTATATCACCCTAGGCAGACCCTCAGGAGCAGGGCACCACGAGAATCAGGAAACGCGTCCCCGTCTGCCTGCCTGAGAAGAAACCTAGAGACTGGCACGTCTCTGAGTGAAGATGAGGAAAAGGCTGTAAATTGGCCAAAAGAGCCTTGCAGTACTCTTTCCACGTGAGAAGGCGATGGCTGGTGGAAGGAGGTGAACCCCGCCGGGAAAGATGGCTTAGCAGCACCTCCAGCTACGGATCCAGGCCAGCTGGTCTGTGCCCTTAGCCCGCCATGGACGGAGCTCACGGTGCAGCCCTGCAGCTCCAGCAGCTCCTGCCCACAAGCAGTGCCAACCCCGTGAGAGAGGCTTCCTTCTCCTACAAGGAAAACTTGATCGGTGCTCTCCTGGCCATTTTCGGGCACCTTGTGGTCAGCATTGCACTGAATCTCCAGAAGTACTGCCACATCCGCCTCGCAGGCTCCAAGGACCCTCGGGCCTATTTCAAGACCAAGACATGGTGGCTGGGCCTGTTCCTGATGCTTCTGGGCGAGTTGGGCGTGTTTGCCTCCTACGCCTTTGCTCCTCTCTCTCTGATCGTGCCCCTCAGCGCTGTCTCTGTGATAGCCAGCGCCATCATAGGAATCATATTCATCAAAGAAAAATGGAAACCTAAAGACTTCCTGAGGCGCTACATCTTATCCTTCGTTGGCTGCGGTCTGGCCATCGTGGGTACCTACTTGCTGGTGACATTCGGACCCAACAGTCATGAGAAGATGACAGGCGATAACATCATCAGGCACCTCGTGAGCTGGCCTTTTCTCCTGTACATGCTCGTGGAGATCATTCTCTTCTGCCTGCTGCTGTACTTCTACAAGGAGAGGAACGCCAATAACATCGTGGTGATTCTCCTCTTGGTGGCCTTACTCGGCTCCATGACTGTGGTGACGGTGAAGGCTGTGGCCGGGATGCTGGTCTTGTCCATACAGGGGAACCTGCAGCTCGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCGACCGCCATCTATCAAGCCGCGTTTTTAGGTCAAGCCTCACAGATGTATGACTCCTCTCTGATCGCCAGTGTGGGCTACATTCTGTCCACCACCGTGGCCATCACAGCAGGCGCCGTCTTCTACCTGGACTTCCTCGGGCAGGACGTGCTGCACGTCTGCATGTTTGCACTGGGGTGCCTCATCGCGTTCTTGGGCGTCTTCTTAATCACACGGAATAGGAAGAAGGCCATTCCCTTCGAGCCCTATATTTCCATGGATGCCATGCCAGGTATGCAAAACATGCATGACAAGGGGATGACCGTCCAGCCTGACCTCAAAGCTTCTTTTTCTTACGGGGCCCTGGAAAACAACGACAACATTTCTGAGATCTACGCTCCTGCCACACTGCCCGTCATGCAGGAAGAACATGGCTCCAGAAATGCCTCTGGGGTTCCCTACCGCGTCCTGGAACACACCAAGAAGGAGTGAGCCCGCCTTGAAGGAGACCCCTTTCCTCTATTCACAGCTGCTCAAGCGGTACTGACAGTGGTTCAATCCTTAATTCTAAAACTTGCCTTTCAAGTCTTTTTTTTTTTTTTTTTTAATCCACGAACTCTGTAGACGAGCATCTCGAAAAGCCTTTGCCTCAGACAAAGAATAGATTACCTTGGTCCTGGAAATTTCAAATGATGAGGCTGGGAGTGGGGGGATGAAAGCAGTGTTCTAGGGAGGCAGGACAGTTCAGCCTCTGCCTGCTTTAGCCCAAGCAGACTTGGAAAGCCTTCCTCATCTGCGGATGGTACCTGGGCTTTCCCAGGCATGACCAAGGGTGGCCATGTTCTTCAGAGCTAAAGCCAGGCAGAGGTTCTGCCCCTACTTTCCAAATCCACTGAAAGGCTGGAAAGCTCTAGATCTAGTCTTCCCTCACCTCATGTGCAGCACCGATCTCTACCCACCTCCCTCTTGAGTCTGTACTTGTGATAACCTTCGTGTCACCTTCTCGTGGCATGGTGAGCCAGCCCCGGCTGTCACATTCTGTCACTCACCGGTAAGGAGTTCACATCTGCTTTCTGAGTGTCTGTGCCTCTCCAGGGAAGATGTGCTTGATGTGTTTGTACTGGGTTCTTTCTGGAAACTAATTTGATTCTGGTTCTGCTGCTAATTTTTTGCCCTCAAGGGAACTGAGAAATTAAGAGAAGGGAAAGAATAAGAAAGAGTAGGAGTGATGAGACTTCAGCCCTTAAAGGAAGAAAAATCCCTTTCATTTGACAAGAGGTGACTGCATCACTTATCAAAGGACAGACAGACAATCTGGGTGTTTTGTGTTGCATTTTCCTGTACACCAGTGCCCTCTGGGAAAACTAGGGGGGTGGAGGGGGGAGGTGCTTATTTTAGAGACAGCCTTGCTCACTTCTCCTCCATCCTCTCCTGTATTGATCGACTAACCAAGCTTGAGTCATTGGCTAACTTCCTTGGGGTCAATAGACTCTTTGGGTCCCCATACACATACATCCTCGAGAAGCAGGAATTCTCAGAAATGGGGCTGCTGCCGGCTGGCTGCATACACAGCTGTCTTCCCTTAGGCTGACTGTATACTTCTGAGAATAGCAGCTAAAGTTCTGTAAACTTTAATGAGAGTAAGGATCCCTTAGGGAATTTATTTAAAACGCAGACTCCCACACCCCAACCTCAGATTAAGTGGGACTGGGACCAGGCCCAAGCATTGCATTCTTGGGACTTTCCTGGTGGTCCAGCGGTGAAGACTCCACACTTTCAATACAGGGGCACAGGTTGGATCCCTGGTCCAGGAACTAAGATCCCACAAGCCGAGTCGCGCAGCCAAAAAAAAAGAGTCTGCGTTCTGAACTGGCAGCGTAGGTGATTTTGAGGCTGGTAATCCAAGTATCACACACCTTAAAAGTCTAATAACTGAGAGAGCCAGTCTGCTAAAATCCTGACACCCCCACACCCAACCCACCCCCCGGTGGAAAGCTGGAACTATCATTCCTTGTTTCCTCTTGGGGGTGCATTTGGCAGGCTCAATAATCCCCATAGGATCCGTGGCATTTCTCCATCCAGTGATTACCTCTTAGAACTGCACTTCCTGCTTCTCTAGGCAGCCTTGAGCTAACAGGCAAGATAACAGTGTTAACAGACCAGTGTTGATAGATCATTAACCTTTATGGATTGTGCTTAATACCGATTTAGTACCTTGTCTTTGAAGCTGGTGTTTGTTGCCTGGGATAACCAGTTCTGTATTGTGTCTTACATGCCCAGGAAGGCAACAGACAATGGCTTTTTTTTCCCCTTTAGGATAGGTATCAACTCAGTTCAACAATGTTTGTGAGACACTGACTATATGTTAAACATTTGGACGGTGAGGGCTACAAATAATAAGACCTGATTTCTGCCCTCCAAGCCAGCAGCAAGAGACACAAATATGTGGTCGACTATGACAGGGCAGGCCGAGTGTGATAGCAGACCACAGAAAATGACAGTTACGGAGGCCCGCTAAAGGCAGGCCCTGAGCCCAGAACTGGGTATTCAGGATTGGAGATGATTTTGGCTAGACTCCCTGGTGGGTGGCAAATCTAGCTAAGATTTGAGCAAAACGTAGCCAGTAAAGTGATCACCCCCAGGCAGGGGGGCCAACATTTGCAAAGGCACAGAGATGGATTGGGGTGGGGGCAAAGGAAGAGCCAGGGTAGGTGATGGGAGATTAGCCTGCAAAGATCAGCAGTAAGAGGTGGAATCATGGAGAAACTTGAAGGCCTGGCTGAGGAGTTTAAAGCGTATCCTAGAGAACACAGGAGCCATTGATGGTTCATGAGGGTGAGAATGGCAGATTGGAAAGGAGGCTTTATGCAGAGCAGAGGAAGAATTTGAAGGGGTGATAAAAGTCAGTGTTCAAGGTCAGGCTGCACGCCTGCAAAACAAAACACAAAAGGGGAATTAAAATCCCTTTTCACTGCCACTCATATTTTCCCGATGATGTTTCCAATGTGGGTCGTAGACCAGGAAGGGATGTGAGGGTGGAGTGGATGGAAGAAAGGTAAGCAAGGAGGCCATTTAAATGTGTCGGACCCAGGTGATCAGCCGGCACCTTGTAGCCCCCAGCCTCACACTGTCATCTGCCCTTTGTTTGGTGACGTCTTTTGGAGTCAGGCAGGAGTGACGAATGGATACAAGCGCGCTGTAATCCTCGGTCAGCCGACGATCGTGGGTTCAGCGCCACCCGGGAGCTGCTGCTGGAGCCTGGGCAGCATCTGCCTCCAGGTTTAGGATAACAGCATCATCTTACGAGGCGGAGTACAGGAGGGCTGGGCAGAGCTGCTGCCGGAGTGGAAGCCAGGGGAGGTCACGTGGTCCCAGGAAGAACAGCTGATGTGGAGCCATGGCACCCAGAATTCCGACTGTGGTCTTGGGCCGGCATCTCCCAGTCTGTGTGCCCGAGTGTAAATGGACTGTTTGCCGGTGACCAATAAGCAGCACTTGCTGTTAGGATGGGGGACAAGGACATCCATTTTCCATCCGCAGCCCTGATTCTTTGTTTCTCTCGTGGTCCTCACATCCCCAAACCCTCTCAAAGGCTCCAAGCAATGTGACATGTCCCAGCAGCATCCCGTTCCCTGCCACCAGGACGTAAGGCAAGGTCACCAAACTTGGGTTTCAACTTTCCAGTTGTTCTCCAGCTTCCTCTGCCCGCCCCACTCCATCCCCCTCTCCTAAAGACTGGGATTCTGGAGTCCCTACTCAGACATCAACATCAGTTCACAGACGGGCACCTGCAGCTTTTAAAGAGAGCTTAGCCCCACTCCACCGGCCCCCCACCCCTCCCATGGAGCTGCAGGTCTGAAGATGCCATCACATGAAGCCTCAGGTGGTGGAGGGTTTTGCAGGGTGGAACTGGATGCTGGGTAGACGAGGGTGAATCGACCTCTCTCCGTCGCTTTGCTGGTGGGAACCAAGCAGCTGGATGGCACAGCATGGCAACGAGATGCCCAGCAGGGTAGTGTTGGGGAACCTCCAACCTGCAGCCTTGCGAATCCCAAATCCGGTCCCACACTGGCTGGTAGGCGTACTGATTCTACTGTGTGTTTCTCTGAGAAGTTGTGTAAGTGAAGTCACCTTAGACTATATTCTATGGGGATGCTCACATTTTGTTAATTTAATGACTAATGTATGGCATGTTCTTATTTTTCAAAAAGGTGTGTGCTAGGTACAAATAACATTATGAAGTGGTATTTAATTAAAAACAAAATCCACATGACAC EMBV3_29482 ACTCTGGTTGAGCCCATACTGAAGAGACGCCTGTTTGGACACTCACAGTTGATACAGAGC Gene GeneID:515665|TMEM9B:NM_001034507:122_cdna UTR3_Alt 2 NULL GeneID:515665 15 GENE TMEM9B MGC127949 TMEM9 domain family, member B EMBV3_32513 TAGCAGAGGAAGCGACACGCAAACGGGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCTA Gene GeneID:540605|CREM:NM_001034710:148_cdna Constitutive 2 NULL GeneID:540605 13 GENE CREM MGC127769 MGC140070 cAMP responsive element modulator EMBV3_39008 AACCCCACCGTTAGGTCCTTTTCCACAACCAGAGGGTAAATGCAGTCAAGACCAAAGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35116 CTTCCACCTGCTGGAGGAGTCGATGGTGAGGGACCTTGAGAGTCACAAGCGGCATGCATT Gene GeneID:616722|LOC616722:XM_002695160:755_cdna Constitutive 0 NULL GeneID:616722 18 GENE LOC616722 NULL similar to immunity-related GTPase family, cinema 1 EMBV3_05827 TGCCGCATAGCCGAATTCGTAATACCACACTGCAGATGTACTGCCTACCCTCCACGCGAT Control NULL NULL 0 EMBV3_41614 NULL NULL NULL NULL NULL NULL EMBV3_29564 CAGGGAGCCTCTAGTGAAAATTTGGCATGAAATGAGGACTAACAGCCCCAAAAAAGGAGG Gene GeneID:514191|PARL:NM_001015596:25_cdna Constitutive 1 NULL GeneID:514191 1 GENE PARL MGC137354 PSARL presenilin associated, rhomboid-like EMBV3_07391 ACCGCGTGCTGTTCCGCCTTGGGAGGATCGAGCCTGCAGGAATGGGCTCCAAGGCCAAGA Variant GeneID:508965|C7H19orf25:NM_001075380:44_cdna 127^218 1 EMBV3_32687 GeneID:508965 7 GENE C7H19orf25 C19orf25 MGC139028 chromosome 19 open reading frame 25 ortholog EMBV3_30455 AGTGGCAGGAGCACATTCTGTTGTCCCATTTGATCTAAGGTTCTTCATATTCTTTTATGC Gene GeneID:522518|CWF19L2:XM_002692951:46_cdna UTR3_Alt 2 NULL GeneID:522518 15 GENE CWF19L2 NULL CWF19-like 2, cell cycle control (S. pombe) EMBV3_39340 CTCCGCAGGGAGGTGACTGGTGATGTGTATGTTTGATTTTGATCTGGACTTTGTGCACGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01390 AGCCGTACTACATCACACAGTTGTTCCGGGCGGCAGACAAGAACCAGGACAACCAGATCT Gene GeneID:786371|LOC786371:XM_002686003:370_cdna Constitutive 0 NULL GeneID:786371 3 GENE LOC786371 NULL similar to S100 calcium binding protein A7A EMBV3_43714 GCTGAGGACTACGCCAAGAAGCTGAGACAGGAGCGGGAGAAAATTGTGGCCCCCATCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16773 CCACACCACCATCTGAGCCCTTTCTACCCATCCCCTAGAGCCACAGTCCTGGTATAAATT Gene BVT0102_106575 + 0 NULL GK000007.2:5792193-5794157 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28484 AGATCTGTGGACCTGTGAGCATAGACTCAGAATGGTGATGACTCTTGAGCCCCCATCCCT Gene GeneID:513554|SOAT2:NM_001101976:6_cdna Constitutive 0 NULL GeneID:513554 5 GENE SOAT2 MGC179401 sterol O-acyltransferase 2 EMBV3_11216 GAGCTGGATCCTCTGTTCAGGATGTTATAAGGCTGCAGTTAAGGTGTCAGCTGGACCAAG Gene BVV0102_076141 - 0 NULL GK000021.2:48445208-48799459 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119623 TCONS_00119617 TCONS_00119619 TCONS_00119611 TCONS_00119618 TCONS_00119613 1 XLOC_072932 NonCoding TCONS_00119618 XLOC_072932 NonCoding NonCoding - 21:48491343-48641663 - TSS89532 1279 2 TCONS_00119618_2 51 0.468334636434715 4 0.991518038305204 8.6725207788709e-22 3.41229098642752e-16 0.000117869128109551 3.09088199159293e-25 0.00031210830824805 0.000197188731881935 2.00347013355028e-07 4.50219966984864e-05 0.000108573988180435 6.47638187445324e-05 0 9.67451304940967e-12 5.34470894959796e-08 6.87202639056785e-202 4.95153868440907e-07 0 0 0 7.75346643421795e-07 0.000287088839701616 3.29068997808692e-05 0 0 0 2.08738119589933e-18 0.000199958016189376 0.000139626886592379 0 0 0 XR_249812.1 LOC101929380 PREDICTED: Homo sapiens uncharacterized LOC101929380 (LOC101929380), misc_RNA. 1e-06 59.0 69.82 0.129007036747459 0 noncoding 0 1 1 1 0.0113516505207878 0.919071493444224 0.0420191494021948 0.48682387119665 CAGTAACAGCTGTTAACCAGCTAGCTGGAACGTGGAGGTCAGCTAAAGTGACTTCAGGAAAACAGAGGCCAAGAATTCAGTTCTCAGATAATTAGACTGGAGAGAATATATAAAGGCTTGGATGGGCAGTGTGTCCTCTAACAATATTCCTTCAGTGTTTAATCTCGACCTCATGATGTTGGACGGCAGCTGATTCAATACGGTGCTCTCTCGCAAGGCCTGGCAGGAGGCACAATCCTGGGAATCTTTTTTTTTTTTTATTCAGAGTAGGGTTCAGGGAATGGTAGCTGCTGACTGAATGGTTCTGGAAAGGCCCAGGTCATCTGAAACAAGCCAGTTCATGAGGATATTTAGTCCATAGCACTTCTGGTCTCCATCCAGTGACAGGGCTCCCTGAGGAGTCAGTCAAAGCTTCGCTTCCATGCCTGACCAGTGGCCCATGAGAGACAGAAGAGGATAAAACATTTTCAGCTCATAAAATACAGAGGATTGATGCCCGGTATGTGTAAAGAGCGCCTACAAATAGATAAGAAGAAATCAGATCCAACTGCCAAAGGGAAAAACGTATTTGAACAGTCCAGGATTTATGGATTGCAGCCCAGAGTCCCAGTTGATCAGAGAGATGACAGATCTTCATACTAAACATAGGCAGAGAGTCCTGCACAGACTTTGTTAGATATAAATGGAAGTATTTAATCTTGGAGGGATTCTACTCTAAATGGTGCTGTCTTACTAATTTCAAATTCCACTTGGTTATTTCTGACTAGAGAGCTTGTCCTGCCAGCCTGAAAGAGGTGAGCTGAATACAGTGGGACACTGTATGGAGAAGGACCCGAGGCAAGGACCTAGGGAGTCCTATAGGAGCTGGGAGCAGTATACAGCCAACCGCCAGCAAGACCTTAATCATGCAACCACCAGGAAACACATTTTTCAACAATCTGAATCAGCTTGGAAAAGGAGCCCAAGCTCCAGATGAGAACTTGGTCCAGCTGACACCTTAACTGCAGCCTTATAACATCCTGAACAGAGGATCCAGCTCGACTGCATCCAAAATTCTGACCTAGGGAAACTGTGAAATAATATATGTCTATTGTTTTGTGGGGAGGAGTCTTTGTTACACAACAATAGAAATGAATATAGATGTTGTGTCCTGCCGGTCCTGTTCATTTTCATTTCCCTGTTGAACTGAGTGCTAACAGAATTGTACTTATGTAACTAAAAATGATTTCAAGTTTTAATAAACTTTAATAGCTCATGTAAGGTTGCTAGTAAATAGCCT TCONS_00119609 s 3' 46137 TCONS_00119609 s 3' 46137 EMBV3_10650 CGTGCCAATCTGACTTAGGTAACTGAATATAGCTGTTTGCACGGGGGTGGGCCTGAAAAC Gene BVV0102_155986 + 0 NULL GK000010.2:19409944-19722919 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31354 TATTCAGTCCCAGTCCTGACCCTGGTCTTCCGCTCACCCTTGGTTGTGGGCTTCTAAAAT Gene BVV0102_170855 + 0 NULL GK000011.2:11316194-11360394 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024079 TCONS_00024081 1 XLOC_014431 Coding TCONS_00024081 XLOC_014431 Coding Coding RAB11FIP5 11:11352203-11358461 j TSS17757 2435 3 TCONS_00024081_2 93 3 0.611315326833946 0.00132521749537697 0.000922775665483231 0.000597883085305248 0.000589058604454878 0.00115922257021212 0.000295802178257548 6.29668677357245e-09 0.000503601526879292 0.000369629110350941 1.64306247886071e-09 1.378742187935e-07 8.82085323366237e-07 0.000166163284012903 0.000249352744779602 6.87717133528986e-09 0.00237060161485266 0.000252272660849631 3.09125158243275e-05 0.000917680340378513 0.000928886183241592 0.00015501644985252 0.000167612688115219 0.000214143053039322 0.000104277647487669 0.0014184193057145 3.13542349952203e-08 0.000456563284913123 0.000284013109088908 8.47709610024339e-05 6.41964385766876e-05 NM_001192869.2 RAB11FIP5 Bos taurus RAB11 family interacting protein 5 (class I) (RAB11FIP5), mRNA. 0.0 4275 100.00 0.972895277207392 XM_005264251.1 RAB11FIP5 PREDICTED: Homo sapiens RAB11 family interacting protein 5 (class I) (RAB11FIP5), transcript variant X1, mRNA. 0.0 1049 74.20 0.616427104722793 0 coding 1 1 1 1 0.0181515280513455 0.871312845210278 0.0347278785316023 0.6431941830415 CCCAGCCTCCCCGCTTGCGCTTCTGCCCTTGGAGACACGACCAGCTGAGGATCCACAGCCCAGTGCCAGTCCCCACCCTGTGAAGCCCCTCAGCACTGCCCCAGTGGAGGGGAGCCCTGACCGGAAGCAGTCCCGCTCCAGTCTGAGCACAGCCCTGAGCAGTGGGCTGGAGAAGCTCAAGACAGTCACCTCCGGCAGCATTCAGCCTGTGGCTCCAGCCCCCCAGGTTGGCCAGACTGCGGACGCCAAGAGGCTGAAGGACTCGGGTGTGCTGGACCAGTCGGCCAAATACTACCACCTGACCCACGACGAGCTCATCGGCCTGCTTCTGCAGCGGGAGCGGGAGCTGAGCCAGCGGGACGAGCATGTGCAGGAGCTGGAGAGCTACATCGACCGGCTGCTGGTGCGGATCATGGAGAGCTCGCCCACGCTGCTGCAGATCCCCCCCGCTCCTCCCAAGTAGCCCCCTTCAGCCCCATCCCGGAGGGTTGGCACAGACCTGCTATCCCACAGGGCTACTCCCTCTCTCCTGCTGAACTAAGCCCCAGCCTGTTCCCCCTGTCTCCTCCCTCAGCCGGGGCTGCTGGAAAGCGGGCCGTGGGGACTCCCACTGGCACCGTCAAGTACTGTGGACAACCTGTGTGTCTTTGGGAGCTCTGGGTCTTTCCCACCTGCCTGTTTTCATACCCCTTAGCTATGGGGGCTCCAGGGAATTGGAACAAAGAATTTAGCCCTCAAGATGAAACCAGGGTGAGCTCCAATTTGATGTGGTACCTGGGACATACTTTATTACCCCCATTTCTTCCACAGCTAAACCCTTGTCCTCTACACCTCCCTCCAGCCTATGGAGGGCTCCTAGTATTATTGGGGCTGTGGCAGGGACCAAGCTGCCCAGATACCTGTGAGTTGTGGGCAACCAGGGTACCTACTCTTCAGCCTCACATCCATTCCCCCGGGAGCGGGAGCCTCGTGGTCTAGCCTTTCTCTGCCATGTCCGAGTCTGCTTGTTTCATGATCGAGTGCAGCGTGGATGGAGGGAGAAGACGGAGGCCACTCCCCACCCTCCTCTTCTGACTTTTGCATCGAGTGAGTGTCATGTGTGAATGTGTGGAGAGCTGGGGCCAGAGTTGGGAGAGCGCCTCCTCACTCACCTCCGGGCTTTGGGTTGCTTATGTTTGGGGATCAAGCCTCCAGCTCTGTTCTCGTTGCCTGTCTAGATACCAAAACCCTGCTAGTGCAGGGTTTGAACTTTTGGAAACCAATTAAAATGTGCCTTTTGTGGGTGGGGTCAAAAGCCTCTGGATGTAGACCTCTCCCCCTAATTGGTGTTCCCTTTCCTCCTGTTGAGCACATGGGGTTGGATCTCTTGGGAGCCTGGGAGTGGGAAAGGAGGGTAGGGCAGTGCTGCTGCATGCTCTGCCCCTTCCCGTAGAATTAATTCCAGCTAAGGGTCTGGCCAAGCTGCTGCTGCTCCCTCAGCCTCCCTGCCATCTCCACCTCCCCAGTTGAGGAGGGTCTTAGGATAAAAACCACATTCTGGAAGTGGGAGGTCCCACCCTGCCTATACTTAGGAAGAAGCCTTTCTTGCCCTCCCATTCATCCACTAGCTGCTGACTAGCCTGTCCCTTCTGCCCCATGTCCTTGCCTGGCTTTGCTGCAGTGCACTTTGAAACAAAGTGTCTACCCTTTGACACAGCCTCTGGTTTGCTTGCGGAAAACATGACAGGCTTCCCCATGGCATCTGCAGGGAAATCTTTGGTGGCTGGGGGCACTCTGCCTTAGCAAACCCTGTGGGGTGAGGAGGTGCTGAAGGGGGATACTTCTGGCCCGCTAAAAACGTGAGAGCTCCTCTGTGGCCACCTCTTCTTCGTGAGACAGCCTGTGGGGTCACTTGGAAAGCCACGGGAAGGGATGTGCTGTCTGGTGATGTCTTCCTTCTGCCAGGATGAAGCCCCACACACAGGGGAAAGCCCTTGTCATGTCATCTACCTTAAGAATCACTCAGCAAAGCTGAAGAGTGTCCATGGGTGCTCAAGACTTCAGTCATGTTTTGGGGGGGTCACGAGGGTGTCACTTCAGGAGGAGGGGGATTACTCCTCTACTCGATGTTCCTCTGGGCACTATTCAGTCCCAGTCCTGACCCTGGTCTTCCGCTCACCCTTGGTTGTGGGCTTCTAAAATGCCCAGGGCAGAGGTCTCTTTAAAAGAGTTTTGGGTTGAAGCCCAGGGTTCTTGTGGCTGTTTCTGCTCCTGGCCACCACTTGGAGGAGTGCTGCAGGTGAGGTGGGCAGGGAGCAAGAGCTGCAGGTGAGGTGGGCGGGAGCAGGCACAGTACTGCTTTGCTGTTTGTCTTCCTAGTTGTAACGCCTGTTTATAAAGAGCTTGTTCTTCATGTTTTGAGCACTTTATGATGAATAAAAAATTAACATACTGTA EMBV3_08923 ACAGCCATTTGTGGCAGGCCAAGAGGCCAGTGACGCCCAAAAAACTGTTACCCACTAAAG Gene GeneID:520385|CAMSAP1L1:XM_002694238:186_cdna Constitutive 0 NULL GeneID:520385 16 GENE CAMSAP1L1 NULL calmodulin regulated spectrin-associated protein 1-like 1 EMBV3_16869 TGTGGAACATTCAGTTCTATTTTGGTGCATTGGCTTCAGAGGCACCCACATATGTCACAG Gene GeneID:520008|ZNF569:XM_002694960:104_cdna UTR3_Alt 1 NULL GeneID:520008 18 GENE ZNF569 NULL zinc finger protein 569 EMBV3_31664 TACGTCTCGGCCTGGACCACACACCGGCTTCAGTGTTGCTGTTAACTTAGCTTCTCTACA Gene GeneID:514844|FNDC1:XM_002690373:34_cdna Constitutive 0 NULL GeneID:514844 9 GENE FNDC1 NULL fibronectin type III domain containing 1 EMBV3_16168 GGAGGTGCCTGAACTGTTACACGTGCTGAAACTTGACAGCATTCGGAAAATATGTAGGCC Gene BVV0102_118488 + 0 NULL GK000008.2:76455391-76468678 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225913 TCONS_00225915 TCONS_00225917 TCONS_00225914 1 XLOC_137880 Coding TCONS_00225917 XLOC_137880 Coding Coding NFX1 8:76445358-76456800 j TSS169030 2162 1 TCONS_00225917_1 116 0.0291396854764107 7 0.811642338956385 2.82261281173022e-15 1.02964036194675e-09 5.32221046775741e-35 5.40176726273318e-17 0.00019757253607194 3.6424981746791e-37 4.42677074213428e-19 1.27352545729017e-37 1.15418509265152e-05 0.00056227720785067 0.000198271247965368 0.000171589648607514 1.45406167094278e-05 7.33958924087222e-28 1.04704509443857e-22 0.000265895533404604 0.00187399965114163 0.00129745873296553 1.44311892783168e-20 2.50407738935738e-09 0.000119827502595012 0.00107798289007679 0.000773629741520624 0.000790929038576962 1.29538084822528e-47 0.00012376898207784 1.08364324285658e-17 2.13751324236583e-05 5.26392270812579e-05 0 XM_005210324.1 NFX1 PREDICTED: Bos taurus nuclear transcription factor, X-box binding 1 (NFX1), transcript variant X1, mRNA. 0.0 1324 100.00 0.339037927844588 NM_002504.4 NFX1 Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), 0.0 1106 75.04 0.771507863089732 TCONS_00225917_1 sp|A6QLA0|NFX1_BOVIN NFX1_BOVIN Transcriptional repressor NF-X1; 6e-75 242 100.00 0.991379310344828 1 coding 1 0 1 1 -0.149025757662059 0.337416417157484 -0.00397485202886221 0.934429467823002 AGCCAGAGAAAGCAGAGACCTGGGCTGGAGTGTGATGAGGAATGTTCAGCCTTGGAAAGGAAAAAGAGGTTAGCAGAGGCATTTCATATCAGTGATGATTCTGATCCTTTCAACGTACGTTCTTCAGGGTCAAAATTCAGTGACAGTTTGAAAGAAGATGCTAGGAAGGACTTAAGGTTTGTCAGCGACATTGAGAAGGAAATGGAAGCCCTTGTGGAGGCTGTGAATAAGGGGAAAAGTAGTAAGAAGAGCCACTGCTTCCCTCCCATGAACAGAGACCACCGCCGGATCATCCACGATCTGGCCCAGGTGTACGGCCTGGAGAGCGTGAGCTATGACAGTGAGCCAAAGCGCAACGTCGTGGTCACTGCGGTCAGAGGGAAGTCCATTTGTCCTTCTACCACACTGACAGGTGTACTCGAAAAGGAGAATCAGTCACGGCCTCCGCCACCGATTGCTCATCACAGACAGACAGACAAGAATCCTGGGAGCAGCAATTTACAGAAGATAGCGAAGGAGCCCGTAATTGACTACTTTGATGTCCAGGACTGAGGAGATCATGACACACTTAGGAAAAAAAATCATTGGGTGTGATGGAGATTTTTTCCCCGCAGATAAATCATGCTTGTTCCCGACTGCCTGGTGGACTCACAGCTCACCTACTGTCTTGACCTTGATACTTGCAAACCACGATTGTGTCAGAAATCCCCTTGTCCGCTCTGCTGTGTGTAAAGTGTCTCACTGTGTCTCACTATTGCCATGTCTCTGACTGAATGATCACTAGTGATTCAGTTGAATTTGCACAGACTCCTCACACCATCACCATGATTGCTTTGAGGGTTGGGGGAACATAGGACTTGATTTTAGTCAAACCGGAATTTTAACCTGAAAATGTCACTTAGGCATGGCCTCAGATGTCCATCCAGTTACCCATCCTCCTCCTGACAATGCCTTGCATTCTTAATCCAAAGTGATCACTATCTTCGGAAAGACAAAGGCTAAAACTTCGCAGTCCAAAGTCCCAAACAACGGCTTGGTACACCGTATCTGAAGTCAGGTGTGCGGTTAAACCCAGCTGTCTTTGCTGAGTCTTTTGCCAAAAGCTCTGCCTGGTCTACCTAGCTAAACTTATCTGAGTGGTCTTCAGTAGCATCAGTGCAGACCTAGGAGAGGGTTTGGGGGACCTGTCTTCCAGAATCCACAGAGGGCCTCTTAGCATTGATCCTGTGTGGTGACAGGTTCCCTCTCCACCATGATGATGGAGGACATAGCATGAGCTCCTCCTCCCACTGGTTCACACTGCGGCCTCTCTGCACTGACATGTGCAGGCATAACCCCTCCTGTCTGGTTGAGAAGGAGTCTCCTGGGCGCCTGCCTTTCCCATGTCACTTTCTTCCAGGCCTGCAGCAACCGTATTGGGGCTTTCCCTATCTCTGAGCTCTGGACTTCTGTTTGCATATTCAGAAAACCATGTGAACGGTCCAGGGCTTACGCCAGCACGCCCCCGAGGTATTCTTCAGGCTCCTGTAAGGCAGGTGCGGCTGCAGTCACATTAGTTCAGCCCTCTGCGTTGGTACCTCTTCAACATGGAGGCCAGACTTCAGCAACTTCGTTCTGCTCCAGAAAAGCCACAAACCCCAGAGCAACAGAAGGAGAAATGAGAAGTGATGTCACAAAACTGGCACTTAGTTTTACCAGGAAAAGCAGGGCCGCCCTTTGGTCCTGACCCAGGCACTCTGCCTCGAAAGACATCAGGTCCAGCAGGACGGGTGGGAGGGTGGGGACAGGTGACTGGAGGGAGGAGACAGAGCCACCTCTCCCGAGCCCGTTTAGCAGAGGGTCAGTGGCCCCACACCCGATAGGGGCCTCAAGCATCTGTTTCATCTTTGAAGCAGTGGGTTGAGTGGGTGAGCTGTACTGCGAGAGCCTCTCCACACCAGCAGGAGGTGGAGACCTGATCTTAGCTTCCAGCTCTGCCATGGGACACTCTGCAGCTGCCTGATGGAGTGGAGCTACCACCTTCCTCACCAGAGTCCTGAGGATTAAATGAGATAATGTACATGGAGGTGCCTGAACTGTTACACGTGCTGAAACTTGACAGCATTCGGAAAATATGTAGGCCTCTTTCTCCGTCATTCCCGCCAAGTAAAGGATTAGAATGC EMBV3_42710 AGAAACAAACACCCTGTAGCATCTCCGCCTCAGCAGGAAGGTGCGTTTGTCTGGGCAAAC Gene BVV0102_327372 + 0 NULL GK000002.2:31285011-31391773 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102083 TCONS_00102086 TCONS_00102084 TCONS_00102085 1 XLOC_061811 Coding TCONS_00102084 XLOC_061811 Coding Coding SLC38A11 2:31391619-31412109 j TSS76124 1063 1 TCONS_00102084_1 209 8 0.948508956025184 0.000101832989779264 5.4954001128322e-160 4.01412875735566e-05 0.000274014655839193 3.16482263801995e-46 0.000833066176920615 1.72844316459823e-23 5.53952400563968e-05 1.07434477474623e-25 9.62459473362422e-05 6.62101468469552e-74 1.2344706681445e-36 1.14293444665384e-23 4.29645205596424e-43 1.69222524984975e-26 8.28682836855075e-173 0.00032929013343871 2.02716596612681e-29 0 0.00101561259139501 2.60138123742902e-26 0.000557961362402142 7.63839705319315e-45 6.7594697301419e-05 4.49325144641197e-05 0.000249973183213169 7.05699275499713e-05 1.51809067997133e-30 8.63683867854298e-05 0.000111900311406211 NM_001031760.1 SLC38A11 Bos taurus solute carrier family 38, member 11 (SLC38A11), mRNA. 0.0 1350 99.87 0.70555032925682 XM_005246350.1 SLC38A11 PREDICTED: Homo sapiens solute carrier family 38, member 11 (SLC38A11), transcript variant X1, mRNA. 0.0 810 87.69 0.610536218250235 TCONS_00102084_1 sp|Q5EA97|S38AB_BOVIN S38AB_BOVIN Putative sodium-coupled neutral amino acid transporter 11; 5e-144 414 99.52 0.985645933014354 2 noncoding 0 0 0 0 0.0262961652642479 0.815233922735689 0.0221900022808705 0.664512502088687 GAAATACGGCGAGAGAGGGCCACCTTCTTTCAGAAACAAACACCCTGTAGCATCTCCGCCTCAGCAGGAAGGTGCGTTTGTCTGGGCAAACCCGGAGGGGAAAGCGCCTCGCCTGCAGCGGCCAAGTGAGTTGGGCCGGCAGCCCGCGGGGAGGTGGGGCGAATTGCTTCCGCAGAGCCTCAACCCGGCTCTCTCCCGGCGCCCTGACGCCGGGCTCGGAGGTCGCGGAGGAGTCGAGGACCCGCGCCCGCGAACCTTCCACCCGCGGAAGACCCGGGTGCAGCCATGGGCTACCCCGGGCAGAGGCCCGTCATCCCGCCGCAGAGCCATCGAGATGACAGAGAAACCCTGGTTTCTGAACATAAGCACAAAGGGAAAACTTGTCGTCAGTCTGCTGCCGTTTTTAATGTTGTCAACTCAATTATAGGGTCTGGTATAATAGGATTGCCTTATTCAATGAAGCAAGCTGGCTTTCCTCTGGGAATATTGCTTTTATTCTGGGTTTCATATGTTACAGATTTTTCCCTCATTTTATTGATAAAAGGAGCTGCCCTTTCTGGAACAGACACTTACCAGTCTTTGGTCAATAGAACTTTTGGCTTTCCAGGATATCTCTTACTCTCTGTTCTGCAATTTTTGTATCCTTTCATTGCTATGATAAGTTACAACATAATAACTGGAGATACTTTGAGCAAAGTTTTCCAAAGAATCCCTGGAGTTGATCCTGAAAACTTGCTTATTGGTCGCCATTTGATTATTGTGCTTTCCACGGTTGTCTTTACTCTGCCTTTGTCCTTGTATCGCGATATAGCGAAGCTTGGGAAGATCTCTCTTATTTCTACAGTTTTAACAACTCTGATTCTTGGAATTGTAGTGGCAAGGGGAGTTTCACTGGGCCCACACATGAGATATTGAACATGTTATAGATCAAGCCAAAAGATGGAGCCAGAGATCCCCAGGAGATCTTGAAAAATTGGAACTCATAATATAAAGTGATCCTTGGAGAAGATGGAAGTGATGGGATAATAAAAATGATCTTGGGACAATAAAAATTTCATATGAA EMBV3_14838 TAAGAGGGAATTCACAGAGAGCCAGCTGCAGGAGGGCAAGCATGTCATCGGCCTACAGAT Gene GeneID:513463|TAGLN:NM_001046149:71_cdna Constitutive 0 NULL GeneID:513463 15 GENE TAGLN MGC127493 transgelin EMBV3_21850 AACAGCCTTCCACAGGAGGGAGACGTGGTGTTGATGACAGTGCAATTTTGGATTGCCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21731 AAGCAGCTGGAAGATGGCCGCACTCTTTCTTGATTACAACATCCAGAAAGAGTCGACCCT Variant GeneID:281370|LOC281370:NM_174133:415_cdna 258^940 1 EMBV3_40947 GeneID:281370 19 GENE LOC281370 NULL polyubiquitin EMBV3_36074 TCTCCCTAGGCCCAGGGGCCTCTCCCAAGACTTGTTGGAGCGCAGGGACCTGTGGCGGCG Variant GeneID:524652|C18H16orf48:NM_001035350:297_cdna 397^859 4 EMBV3_34753 GeneID:524652 18 GENE C18H16orf48 C16orf48 MGC127802 chromosome 16 open reading frame 48 ortholog EMBV3_17949 GGACAAGAGCTCGGAGACAGAACGGTGAAGAAGGCTACGTTCCCACATCATACATAGATG Gene GeneID:616665|FNBP1L:XM_002686227:227_cdna UTR3_Alt 2 NULL GeneID:616665 3 GENE FNBP1L NULL formin binding protein 1-like EMBV3_17834 CCATTGGGTTTTATTCAGTTAAGCCTACAGCTTGCAACCAGTACTTTGAAAAATATCCAG Variant GeneID:519307|LOC519307:XM_002696260:38_cdna 622^801 1 EMBV3_19981 GeneID:519307 20 GENE LOC519307 NULL hypothetical LOC519307 EMBV3_17155 CTGAGGCGCAGCTCAGTGCCTGTCAGTCCTCTGACTTAAAATCACTTGTATAATACCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27333 GGAAAGACGAGACACTTCACAAAATCAACGGAGAAAATAATGAATGTCAAAGGAAAAGTG Variant GeneID:281780|GGTA1:NM_177511:24_cdna 346^461 6 EMBV3_31965 GeneID:281780 11 GENE GGTA1 NULL alpha-galactosyltransferase 1 (glycoprotein) EMBV3_03679 AAGGCGATGGATATTCATCAGTTAAGATGGTAATGTCATTGCTATTTTTTTAACATCCTC Gene GeneID:526529|TUBGCP3:XM_002691996:102_cdna Constitutive 0 NULL GeneID:526529 12 GENE TUBGCP3 NULL tubulin, gamma complex associated protein 3 EMBV3_16646 AAAGTTGCCTTTTCAAAGTGTCCAAATCATAAGTGATGGGTCCCCAGAGAGCCCCCGAGG Gene BVT0102_188738 + 0 NULL GK000018.2:53769639-53770820 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086894 TCONS_00086893 TCONS_00086895 1 XLOC_052279 Coding TCONS_00086894 XLOC_052279 Coding Coding DMWD 18:53769793-53777767 j TSS64586 2220 2 TCONS_00086894_1 223 3 0.721936535808353 0.000494673328215811 0.00172721422296543 0.000734204252058364 2.1175886554179e-23 9.7795211155659e-17 0.00033795841856016 0.000168175757168925 0.000696531108352545 0.00116835484151346 0.000772193905619072 0.000746242615565193 0.000149721837756738 2.32129677015682e-05 0.00113062547617857 0.00108822483757655 3.75511106026127e-89 5.80544817774094e-62 2.69453445863249e-176 0.000288647886203246 0.00230374851373475 0.000294565339290967 1.35035648339884e-15 8.64182154342301e-05 6.90469694090213e-10 0.0016684853349644 3.84613002114762e-36 0.000585952290519049 0.000120671287890268 8.87877313074468e-05 0.00084541736396524 XM_002695097.2 DMWD PREDICTED: Bos taurus dystrophia myotonica, WD repeat containing (DMWD), transcript variant X1, mRNA. 0.0 1126 100.00 0.280630630630631 NM_004943.1 DMWD Homo sapiens dystrophia myotonica, WD repeat containing (DMWD), 0.0 895 91.83 0.280630630630631 TCONS_00086894_1 sp|Q09019|DMWD_HUMAN DMWD_HUMAN Dystrophia myotonica WD repeat-containing protein; 2e-139 410 97.62 0.937219730941704 0 coding 1 1 1 1 -0.0642545612948775 0.70208906449789 0.0228134335595399 0.78320686507919 ATGGCGGCGGGCGGAGCGGAGGGCGGCTCGGGCCCCGGCGCCGCCATGGGGGATTGCGCGGAAATCAAGTCGCAGTTCCGCACCCGCGAGGGCTTCTACAAGCTGCTCCCCGGCGACGGCGCCGCCCGCAGATCGGGTCCGGCTTCCGCCCAGACCCCGGCGCCGCCCCAGCCGCCGCAGCCCCCGCCCGGCCCTGCCTCTGCCTCGGGCCCAGGCGCCGCGGGCCCCGCTCCGTCCCCTCCGCCTGCAGGCCCCGGGCCCGGGCCCGCGCTGCCTGCGGTGCGCCTAAGCCTCGTGCGTCTCGGGGAGCCCGACAGCGCCGGGGCCGGGGAGCCGCCTGCCACGCCCGCGGGACTGGGCGCCGGGGGAGACCGCGTCTGCTTCAACTTGGGCCGCGAACTCTATTTCTACCCGGGCTGCTGTCGCCGTGGGAGCCAACGGTCCATTGACCTCAACAAGCCAATTGACAAGCGGATCTATAAGGGCACTCAGCCCACCTGCCATGACTTCAACCAGTTCACTGCTGCCACGGAGACCATCTCCCTGCTGGTGGGCTTCTCAGCCGGTCAAGTCCAGTACCTGGATCTCATCAAGAAGGACACCAGCAAACTATTCAATGAGGAGGGCATCTCCTCCCAGCCAGGCAACTCCCCAAGCGGCACAGTGGTGTGAAGCCGTGGATGTCGGGGTCCCCACACACCACACCCCCAGCCTCCTAGTGTAACCCTTCCCGCTGAACTCCCGGATCGACGTATTAACAAGACTAACCATGACAGATGGACTGCTCCGGTCCCTCGCCCTGCACAGATTTGGGGGTAGATGGTCCCTCAGACTGGCCCAGACACTGGGGGGATGTAGTGGCCTGTGTGGCCTCCACCTCGTCCCCACCCACTGCCAAATACAATGACCCCTTCCTCCGAGACATCAGTGTTAGCCTCCCTGTCCCCAGCATGTGACTGGTCACTCCTGGGGGAGAAACCGCCCCCTACAAGAGCCCCAGCTCTGCAGTGTGCCCCTCCGTCCTGTGCGCAGGGCAGGGGGCGGCCCACCCCTCCCCTGGCCCCAGCCCTGCCCTTGCCGTTCCTTGTGCTTTTGAAGAGTGTTAAATTATGGAAGCCCCTTGGGGGGCGGGGGGGGGGGGGCCCTCCCTGTCCCCTGGGACCTCTTATTTATACTAAAGTTCCCTGTTTTCACCACGTCTCTGTTCCCTTCCGCGGAGGTGTGGAGGGAGTGTGTGTGTGTTCAGTGCAGTCCTAGAATCAGTCCACTTTATGCAGAGCAAGAGCTAGGCCCAGTCTCCCCCCAAACCCCCTTTCGATGGCAGGAAAAATAAGACTGGAGGAGGGCGGTGCCAGGGGCACAAAGCTGGTGGGTCAGTTGCTGGCCGGCCGGGGGCAGGGCCCTTCAGATGGGGAGGATCCCTCACACTGTCCCCACCCCCAAACTCTCAGAGGGAAGGGAGCCGCCAGTACCCCTTCAAGGTCTTCAGTGGGCGTTTTTAAAGTTGCCTTTTCAAAGTGTCCAAATCATAAGTGATGGGTCCCCAGAGAGCCCCCGAGGTCCCCTGAGTGACCTGCTGCCAGCACAAGCCTTGGCCTGCTCACTCGGCCAGGGGGGCCCTGGCATCCAGGGCCGACCAGAGACCACGGTTTCCTCTGGGAGGACTGTCCACCCTGGAAAGAACAACGAAAATCCCTCCTGGCGGCTCTCTGAAGCCACAGGGAGTAGTGTCTTCCCGCTCCGCCCTTCACCCCCCGAAATGTTTCTGTTTCTAATCCTAGCCTGGGCAGGAATGTGGCTGTGCAGCCAGGGTCCAGGGAGCTATTTTGGGGGCTCCTTTGGCTCCCCTAGCTTTGGCCAGTGGGTCACCCCTGGTCCTGGCTGCTGAGGGCCTCCATTCCCGATTCTCTCACCGCCCCTTCCCCACCTCCTGCCCAAAAAAAAAAAAAAGGGGGCAGTGTAAAACAGAGGGCCTGAGGGCTAAATTTAAACCGTCCCAAAGTCTGAATCCTTGGCTGAGTCACCCGCAAAGCTGCCCTGGCCTCCAGCCCCCCCTTCCCAGGCCTCACCCCTTTTTCTCCCCTCCCAGCTCCAGAGCTTGGGAGGGGTGTTACCAGATCACTCTGAACCTCAATTGGTCCCCTCCGGGGAATGGGAGGGCTCATCTCTGCCATCGGTCACACCTGTGCCGGGCCTTTTCAGTGGGGGAGGGGGAGAGTT EMBV3_17269 TGCTCATGCTTAAGTATTTCATGTGCCTCGTGGTGGGCATCACGTCAGGCGTCTGGATTT Gene GeneID:538536|FZD5:XM_002685540:130_cdna Constitutive 0 NULL GeneID:538536 2 GENE FZD5 NULL frizzled homolog 5 (Drosophila) EMBV3_07761 GGCATCGTCGTCGGCATCCTCATCGCCCAGTGCTGAAGAAGCTGCGTGGGACCGCGGACG Variant GeneID:282356|SLC2A1:NM_174602:23_cdna 682^844 1 EMBV3_06755 GeneID:282356 3 GENE SLC2A1 MGC139716 solute carrier family 2 (facilitated glucose transporter), member 1 EMBV3_28385 AGCGGATGGCTGCTGCACTCTTCCAACAAGAAACAAAGCCAGCCTGCGTGTTCAACAACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28918 CTGTGTGGGACACTTAAGAAAAAACACAGATGAGTGCCAGGTGACCACAGCTGCACCAGC Gene GeneID:615237|PRSS1:XM_002687076:238_cdna Constitutive 0 NULL GeneID:615237 4 GENE PRSS1 TRY1 protease, serine, 1 (trypsin 1) EMBV3_35422 GAGGACCAGCTGTGTCTAGTTTCCGAGGAAGCATGCAAGCACACCTCATTGCATTCATTC Gene BVV0101_038504 - 1 EMBV3_22872 GK000007.2:2909533-2910374 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00211435 TCONS_00211445 TCONS_00211437 TCONS_00211440 TCONS_00211443 TCONS_00211444 TCONS_00211441 TCONS_00211442 TCONS_00211439 TCONS_00211438 1 XLOC_129875 Coding TCONS_00211442 XLOC_129875 Coding Coding MRPL55 7:2905858-2910117 j TSS158885 1153 1 TCONS_00211442_2 140 4 0.73015500234852 0.00174732574774057 0.00155334676989793 0.00294320384476125 0.00292180121802717 0.000542225933654925 0.000235618887305796 0.00109494425211298 0.000984930716831262 0.000868492365168766 0.00254302509719899 0.00220977486385656 0.00104314829008723 0.000535538207090333 0.00247740588824217 0.00188137445203857 0.0409211560713701 0.0132983580099053 0.0319489504617676 0.00736163672443979 0.00473389101376406 0.00246523181181784 0.020750306700596 0.0120369297557077 0.0160715407144224 0.00301684482115023 0.000912188523801007 0.0023440843862615 0.00649114936050822 0.0050157010902579 0.00768257116771847 XM_005208401.1 MRPL55 PREDICTED: Bos taurus mitochondrial ribosomal protein L55 (MRPL55), 0.0 1025 100.00 0.491760624457936 XM_005273059.1 MRPL55 PREDICTED: Homo sapiens mitochondrial ribosomal protein L55 (MRPL55), transcript variant X7, mRNA. 8e-60 235 72.99 0.349522983521249 TCONS_00211442_2 sp|P0C2B8|RM55_BOVIN RM55_BOVIN 39S ribosomal protein L55, mitochondrial; 5e-90 262 100.00 0.892857142857143 1 coding 0 0 0 0 0.719078858368471 0.241618972483777 -0.0617819080444315 0.296861111367506 GTTGCACACTGAGCCAGTGAATGACCCTAGGCCTTCAGGTGCTGCAGGGGCTCTCAGGAGGAATGTCGGCCAAGGGCAGCCTGCTTCGCCTGCTCTGGCAGTGTGGGATGACGAGGGCTGCCCCTGAGAGCTGCCGCTACCTGTATACATCCTCTTGGCGGGCTGACTGCAACAGAGCCTCACTCACTCGAGTGCACCGGCAGACCTACGCACGCCTCTACCCTATTCTCCTGGTCAAGCAGGATGGTTCCACCATCCACATCCGTTATCCAGAGCCACGTCGGATACTCACAATGCCTGTGGACCTGGACTCCTTGTCCCCAGAGGAAAGGCGTGCACGATTCCGAAAACGAGAGGGCCAGCTGAAAGAGAAGAAGGAGGAGCCAGAGCTCGCTGACGACTTTGATGTGGAGCAGTACAAGCAGTTTTGGACCAAAAAGTGATGGTGCCTGGAAGCTGCTGTGTCCTAGGGAATGCTGTGGAGCAGGGAGGGGCATGTGTCTTTAAATCATGAGTTGATGAAGCTGTATCTTGTGAAAAGATCAATACAAAGGACATTCAAATAACAGTCTTGACACTGTTGTAAATCCCTCAGAAAACATTTGTTCACCCTACGGATTCAATTCAGGGGTTGGCTAGTGGAGTAGCACTCCTCCACTCACTAGAATTGTTATCATTGAGTCTAATCTGGTCTGCTGTGATGATAAACAGAACTGCACTTGCCCAACAACTAGCTCAGTTTAGTTCAGATACTGACCCATCAGCAGTGACTGCCAACACCTTGGGGGTGACTGAGGCATTCTCTGCGCTGTCGGGGGGAATGAATGCAATGAGGTGTGCTTGCATGCTTCCTCGGAAACTAGACACAGCTGGTCCTCCCGAGGGCGGAGGCCGAGCGTGACAGGCACGACCTGACCTTGGCCGCTCTCCCAGGCAGCCGGCTACCTGATAGACACCTCCAACAGCTATAGTTGGAAGCCTTCAGTCGTCTCGTGCCTACCCCTCCTCCAGCACAGCCCAGACACGTCCAACAGCTATAGTTGGAAGCCTTCAGTCGTTGTCTCGTGCCTACCCCTCCTCCAGCACAGCCCAGACACCTCCAACAGCTATAGTTGGAAGCCTTCAGTCGTTGTCTCGTGCCTACCCCTCCAGC EMBV3_23489 TGACCACCTGTTGTACACTAGAGGAAGATACAGAGAACAGAATTGCAGGTGCCAAGGGGG Gene BVV0102_357864 + 0 NULL GK000013.2:65543150-65545939 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046010 TCONS_00046012 TCONS_00046011 TCONS_00046008 TCONS_00046009 1 XLOC_026596 Coding TCONS_00046012 XLOC_026596 Coding Coding NFS1 13:65543418-65563426 j TSS33456 4559 1 TCONS_00046012_3 397 0.309497696863347 13 0.772779527165492 0.000112953593946112 1.01066761172515e-09 5.07293587741456e-12 1.9567232030811e-10 1.86611223148549e-06 9.08192688273064e-09 0.000249930488978429 0.000310708788507194 0.000270544917384951 0.000159307290083191 8.54008022488213e-11 1.09368128337203e-27 8.12802180556625e-12 2.86882870086371e-09 2.20463697798417e-11 4.24160051422135e-07 3.78512735103605e-12 0.00129034084813671 3.70422902121929e-07 4.3053818442999e-07 3.98729227737951e-07 3.85710210236633e-08 1.78002984753874e-09 0.000374674176663189 2.89561689575442e-11 1.54613510879283e-22 5.94725825937342e-05 5.21558633711487e-08 2.18041603657589e-16 0.000138578198752087 NM_001099001.1 NFS1 Bos taurus NFS1 nitrogen fixation 1 homolog (S. cerevisiae) (NFS1), 0.0 3517 100.00 0.427506032024567 NM_021100.4 NFS1 Homo sapiens NFS1 cysteine desulfurase (NFS1), transcript variant 0.0 2311 86.15 0.42904145645975 TCONS_00046012_3 sp|Q9Z1J3|NFS1_MOUSE NFS1_MOUSE Cysteine desulfurase, mitochondrial; 0.0 806 96.73 0.997481108312343 2 coding 1 1 1 1 -0.0956654891927675 0.382642284828275 -0.0258632228940017 0.700646141752488 ATCACGAAGCCCATCTTCACGCGGTCGAAACAGCTTGGCTGGGACTGTCCATAGGGACCCACGGCCACCGGCATCTGCGGGGTTCGAAGGTATAGACCTTACTCCCCAGTCTGCTGTTGCCTCTGATGCAGCCATTGCTCTGGAGGCGGAGTCAGTGCTGCGACCTCTGTACATGGATGTGCAAGCTACAACTCCTCTGGACCCTCGGGTGCTTGATGCCATGCTCCCTTACCTAGTCAACTACTATGGAAACCCACACTCCCGGACACATGCTTATGGCTGGGAGAGTGAGGCTGCCATGGAATGTGCTCGCCAGCAAGTAGCATCTCTGATTGGGGCTGATCCTCGTGAGATCATTTTCACTAGCGGTGCTACTGAATCCAACAACATAGCAATTAAGGGAGTGGCCAGGTTCTACAGGTCCCGGAAAAAGCACTTGATCACCACACAGACAGAACACAAATGTGTCTTGGACTCCTGCCGTTCACTGGAAGCTGAGGGCTTTAAAGTCACCTACCTCCCGGTGAAGAAGAGTGGAATCATTGACCTGAAGGAACTAGAGGCTGCCATCCAGCCAGATACCAGCCTGGTCTCAGTCATGACTGTGAACAATGAAATTGGAGTGAAGCAGCCCATTAAGGAAATAGGGCAGATTTGCAGTTCCAGAAAGGTGTATTTCCATACCGATGCAGCCCAGGCTGTTGGAAAAATCCCACTTGACGTCAATGACATGAAAATTGATCTCATGAGCATCAGTGGTCACAAAATCTATGGTCCCAAAGGGGTCGGTGCCATCTACATTCGCCGGCGGCCCCGTGTGCGTGTGGAGGCCCTGCAGAGTGGAGGGGGGCAGGAGCGGGGTATGCGGTCTGGGACAGTACCCACACCCTTGGTGGTGGGGCTGGGGGCTGCGTGTGAGGTGGCACAGCAAGAGATGGAGTATGACCACAAGCGAATCTCAAAGTTAGCTGAGCGACTGATACAGAAGATAATGAAGAGCCTTCCAGATGTGGTGATGAATGGGGACCCTGAGCACCATTACCCAGGCTGTATCAACCTCTCCTTTGCGTATGTGGAAGGGGAGAGTCTGTTGATGGCACTTAAGGATGTTGCCTTATCCTCAGGGAGTGCCTGCACCTCTGCATCCCTGGAGCCCTCTTACGTGCTTCGAGCAATTGGCACTGATGAGGATTTAGCTCACTCTTCTATCAGGTTTGGCATTGGCCGTTTCACTACAGAGGAGGAAGTGGACTACACAGTGGAGAAGTGCATTCACCATGTGAAGCGTCTTCGAGAAATGAGCCCTCTCTGGGAGATGGTGCAGGATGGCATTGACCTCAAGAGCATCAAGTGGACCCAACACTAGAAGAGTGGGCCTCTAAGTTTGTGCTGGCTCCTCCTGCCTCATCAACTCATGCACAGCCAGGCATTTCGTTACCCCAGTGGCTGCTCCATGTTCAAACCAGAACTGGTGTAGCCCACCTGACTTCAGCATTGGCCTGCCTCTAAGACAGAAACATGAGAAAACTGTCTTTCTCTGGCCTCAGCTCCTTTGGTGGGGAACATTCCCCATTTCTTTCCAGGAATCCTTCTCTGGTCTTATAGTGAGTGGATGTTCTTATCCTGAACCAGGAGGGACATTTGCTATGAGCTGCTGCTGGACACATCTGTATCCTTGGTGGAGAGAGCCAGAGGAACTACAAAAACGCTTTTGTTCAGGGACCCTGATGCCCTGGGTGGACATTTGAGTTGTTGCTTACCGCTGCTGAGAGACTCACTTCTTCCGATAGAAGCATAATCATCTATGACTTCATCTTTTTTGTGGCTCCAAAGGCTACCTCTTCATATCGTCTATAGACTGAACTGCAAGTTTCTTAGAAGGCTTGTCTCCTCTGTGTTCTTGTCCTTCTTTTCTTTTGACCTAATGGAGCTAGAAATATCTGTATGACTGAGTCTACCTAGTCTTGTAGTAATTTATGTTTCTTTTAAAAAAAAATTGTTAATTTGAAGATTAGAGGAATAAAATCATCTTCCTGTATTTATTCTATGAGATGCTCAAGGAGAATTCCTGGAGAAGGAAATGGCAATCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACAGGGGAGCCTTGTGGGCTGCCGTCTCGGGTTGCACAGAGTCGAACACGACTGAAGCGACTGAGCAGCAGCAGCAAGGAGAATTCCAAGCTTGGGAATCGTAGGGCAGACTACTTCTTGATGTCAACAGATGAGTCTGCTTGCTTATTTCTTTAGTCAGCAATTATTTGGGTGCCTCACATTATTCTGGATATTTGGGATACACTGGTTAACAATACCAAAAAGTACTCTCGGTGAACTTTCATTCTAGCAGACAGAAAGAAAATAATAATTAAATAAGGCTATTATTATAGACTGTGATGAGTGCTGTGGCAGAAATTGAGTGGTAGAGAAAGTAACAGGGAAAGAACCTACCATGCTGGGTATACTAGGAAAGCTTTTTTGAGGAGGTGTTAATTAAGCACAAACATGATTTCTAGCCATCAAAAGAACTGGGGATTGGTGAGGAATAAGAAGGAACAGTAACAGCAAAGGGCCTGAGGCATGAAAAAGCATGGTGTTTGAGAAACAGAGGTCAAAACAGCCAGAGTAGAGTTTTGCGATTTGCGGGTCTGAAACCATAAGTGGGAGGTTACCAGCATTAAAAGGGGGAAGAAAGAAATTTTATTAGAGTACATCACATGTAAATATTTAAAAATTTTATTGAAGTATAGTTGATTTAAAATGTTACATTAATTTTTGCTGAAGAGCAAAGTTACTCAGTTATATGTATCTTCGTATTTTCCATTATGGTTTATCATAGGACATTGAGTATAGTTCCCTATGAAATACAGTAGGACTTTGTTGTTTATCCATCCTGTATATATACTAGCTTGTATCTGCTAATCCCAAACACCTGATCTTTTTCTTCCCTACTTGCCTCCCCCTTGGCACCTGCAATTCTGTTCTCTGTATCTTCCTCTAGTGTACAACAGGTGGTCAAGATGACATCTATGTCCTGCCAGTTCAGACCGAAAGCCACTCTGAGTCCTCTGAATTCTCAAATAAAATTGGTGGGTTCCTGACTAAAAGATCTGAATTTAGTTTCGACTTGTAACATATCAGACATAGGAAAGGAGAAATGAACTGAAACAGTGTCCGTTTCTCCATCGGCCATCTCAAGGAGAAGCAAAAGATTTTCAGGGAGTTGAGGGTGTTCCTGAGGCGAATCTTAGTTTCTGACCAGGGATCAAACCCCTGCAGGCATGGCCCCCCCAAAAAAAATCAACATATGGGTACAAATATCTTTCTGAATTATAATTTTACTTGGGTATATGCCCAATACTGGGATACTGGATCATATGGCAACTCTAGTTTTAGTTTTGTGAGGAAGTTCCATACTGTTTTCCGTAATGGCTGCACCAATTTACACTCCCACCAACAGTATAGCACATATGTTAAGTATCTTATTTTTATCACAGATTTTAATGAGTTTACAGGTTGCAAATATATTTCTTATGTGAATGATACTCAAAGTTTGAAGGCCACTAGGCTAAAGTATGGTAAATGCAGACAAATGAGGAGGAGGAGATGGAATTAATAGTTTTCTGAATAAATTGTTTTATTTTGAATAATCTTAGATTTAGAGAAATGTTGCAAAGACAGTATAGAGTTGCATGTCTATCACCCAATTTCCTCTAATTTTTAACATCTTACTTAAAACTATGATGTCAAAACTAAGAGACTGACATCTATACATCAGTATTAACTAAACTTCAGATTTCATTCAGATTTCACCAGTTTCCCCACTAATGTCCTTTTTCTACTCCAGGATTCAATCCTGGGTACCATGTTGTACTTAGTAGATTTTGTTCTTAACGCACTGCATTTTACCTGCAAAAAGTATATATAATGAAGTACCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGAACCCCAGCATGCCAGGCCTCCCCGTCCTTCACCGACTTCCGGAGTCCACCCAAACTCAAGTCCATTGTGTCGGCGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCCCCTCCTGCCCTCAGTCTTTCCCAGCATCATACATTTGTTTAAAAGCGTGATCTGTTTTAAGTCACACTCAGCTAGCACCAGGCTAGTCTGCAACACAAATCTTCCCCAAACTTGGGAGTTTTGGGGAATTTAGTCTCTGATTTTGTTAGTCAATTGCCTCTTTTTCTGCCTTGGAAGATTAGTTCAATTATGGTAACATTAATCAAGAGATAGGATATATACGAGCGAGTGGAGTCTGCGAGGCTTAGGACCTAAGTAGCACAAGAATAATTTTTTCTATAATAAAACCATACCAAAGTGCAGTCGTGGAGAGGTTAACGAGGACTGGTAAGGCTCCCCGGGCTGAAAATTTTAAATTTCACCACCATTTTGTGGTCCTTTTAATCTCAAAACAATTCTGCGAGGTAGGCAGTATTTTCCTCCTTTCGCAGAGGCTCGAAAAGAAG EMBV3_33726 ATATTCAGGAGTATAGCTGTTGTCTCCCCCTTCATCTTCCTGTTGAGGCGACTGCCCTAC Gene GeneID:100336857|LOC100336857:XM_002693211:414_cdna Constitutive 0 NULL GeneID:100336857 15 GENE LOC100336857 NULL olfactory receptor, family 51, subfamily E, member 2-like EMBV3_07833 TACCTATAATTCCAGAACCTATCCGGCCGCTCACTCCAACCCAGCGCTCATGGAAAGACT Gene GeneID:538979|MED12L:XM_002685015:167_cdna Constitutive 0 NULL GeneID:538979 1 GENE MED12L NULL mediator complex subunit 12-like EMBV3_30373 CTAAATCCAGCTTGAACATCTGGAAGTTCTCGGGTCACATACTGTTGAATCCTGGCTTGG Gene BVV0102_405784 + 0 NULL GK000007.2:4574950-4586620 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00072702 TCONS_00161021 TCONS_00169674 TCONS_00187299 TCONS_00104659 TCONS_00124720 TCONS_00252869 TCONS_00123790 TCONS_00192815 TCONS_00019748 TCONS_00188878 TCONS_00224116 TCONS_00107388 TCONS_00117232 TCONS_00246989 TCONS_00063746 TCONS_00244596 TCONS_00056891 TCONS_00039122 TCONS_00025106 TCONS_00019500 TCONS_00174943 TCONS_00246992 TCONS_00199064 TCONS_00137594 TCONS_00020536 TCONS_00252093 TCONS_00148976 TCONS_00219862 TCONS_00023380 TCONS_00005084 TCONS_00169672 TCONS_00198644 TCONS_00222267 TCONS_00222187 TCONS_00124721 TCONS_00136361 TCONS_00118472 TCONS_00244589 TCONS_00192270 TCONS_00239944 TCONS_00019140 TCONS_00167054 TCONS_00169677 39 XLOC_044470 XLOC_097913 XLOC_103417 XLOC_113347 XLOC_062436 XLOC_076264 XLOC_155810 XLOC_075342 XLOC_117279 XLOC_010427 XLOC_114919 XLOC_137412 XLOC_063298 XLOC_071398 XLOC_151185 XLOC_038472 XLOC_150504 XLOC_034694 XLOC_022940 XLOC_014669 XLOC_010179 XLOC_104742 XLOC_120717 XLOC_083804 XLOC_011211 XLOC_155034 XLOC_090854 XLOC_133179 XLOC_014047 XLOC_001179 XLOC_120298 XLOC_135576 XLOC_135496 XLOC_082575 XLOC_072630 XLOC_117149 XLOC_146609 XLOC_009820 XLOC_101890 Coding TCONS_00192815 XLOC_117279 Coding Coding SLCO1A2 5:89258892-89311142 = TSS144210 3504 1 TCONS_00192815_7 666 0.212614155251142 14 0.933204463243316 0.00239406859339526 0.0016019476734959 0.000883125123558394 0.000875047843697966 0.00103773727590321 0.00108351668208485 0.000698756784213695 0.000793862394245944 0.00234668798861396 0.00120585329736919 0.00100167777780926 0.000740274618230851 0.00060184927687792 0.00212180040279745 0.00107835403772325 0.0114573514849353 0.00532314138953795 0.00451585901945837 0.00183690389895923 0.00246428006163737 0.000753286110289667 0.00479365165994467 0.00288207474675086 0.00441286260041701 0.00151308590233087 0.00336552169451309 0.00235917584575585 0.00202542071951288 0.00190712670667417 0.00265333248218602 NM_174654.2 SLCO1A2 Bos taurus solute carrier organic anion transporter family, member 1A2 (SLCO1A2), mRNA. 0.0 6293 99.83 0.999714611872146 NM_021094.3 SLCO1A2 Homo sapiens solute carrier organic anion transporter family, member 1A2 (SLCO1A2), transcript variant 2, mRNA. 0.0 2800 82.56 0.780536529680365 TCONS_00192815_7 sp|P46721|SO1A2_HUMAN SO1A2_HUMAN Solute carrier organic anion transporter family member 1A2; 0.0 1130 82.09 0.998498498498498 3 coding 0 0 0 0 0.0384960873637464 0.726873394132452 0.0042566703623016 0.948252993652192 ACACAATGGATTCTTGATTCTGTTATTCAGATTCAGTGTTTTCTTCAGAAGAATGACCCTTTATGACTTTGTCAGTAATTTAATAGATTTTTGTCTTCTTAAAAGACTAGAATTAAGAAATATCAAGATTTAGAACATAAATATCTTGGACTATTCAGAAGAACAACATGGGAGAAACTGAGGAAAGAATCGAAACTCATAGAATAAGATGTCTTTCCAAGTTGAAGATGTTTCTGTTGGCAATAACATGTGCATTTGTATCCAAAACACTATCTGGATCTTATATGAATTCCATGATCACACAAATAGAAAGACAATTCAACATCCCAACATCTCTAGTTGGATTTATTAATGGAAGTTTTGAGATTGGAAATCTTTTGTTGATTATATTCGTGAGCTATTTTGGAACAAAACTGCATAGACCAATAATGATTGGTGTTGGATGTGTGGTTATGGGCCTAGGGTGTTTCTTACAATCGCTACCTCACTTCCTCATGGGCCGATATGAATATGAATCTACAGTTTCAGTTTCCGGCAATTTGTCCTCAAACAGTTTCTTGTGTATGGAAAATGGAACCCAGATTTTCAAACCAACGAAAGACCCATCAGAATGTGTGAAAGAAGTTAAATCATTAATGTGGGTGTATGTACTAGTTGGAAATATTATACGTGGAATTGGTGAAACTCCCATCATGCCTTTGGGTATTTCCTACATAGAAGATTTTGCCAAATTTGAAAACTCTCCTTTGTATATTGGGTTAATCAAAACAGGAGGTATCATTGGTCCCTTGATTGGTCTTTCATTAGCGTCATTCTGTGCAAATGTTTATGTTGACACTGAATCGGTGAACACAGATGATCTGACCATAACTCCCTCTGATACTCGTTGGGTTGGTGCATGGTGGATTGGCTTTTTGATTTGTGCAGGAGTGAATGTGCTCACTGCCATTCCTTTTTTCTTTTTGCCCAAAACGCTTCCAAAGGAAGGACTAGAGGATAATGCTGAGATCATTAAAAATGACAAAGAGAAACAAGAAGACATCAAGAAGAAAAGGGATGCAATCACTAAAGATTTTTTACCCTTCATGAAAAGTCTTTTGTGCAACCCAATTTACATGCTTTTCATACTGATAAGTGTGCTGCAGTTCAACGCATTTGTCAGTATGGTTTCCTTCATGCCTAAATATATGGAACAGCACTATGGAAAATCAGCTTCAGAGGCAATCTTTCTCCTTGGTATTTATAACTTCCCTCCAATATGTATTGGATATATAGTTGGTGGTTTATTTATGAAGAAGTTCAAGATTACTGCCGTACAAGCTGCCCACATAGGATGTTGGTTATCTTTTACCGAGTATCTTCTCCATTTTTTGTGTTTTTTCATGATCTGTGATAGTTCTTCAGTTGCTGGCCTAACCACGTCTTATGAAGGAATACATCAAAATTTACATGTGAAAAATTTCCTTGCTAATTGCAACATGGATTGTAACTGTCCGACTAAAGTATGGGACCCTGTGTGTGGAAACAATGGCTTGTCATACACGTCAGCTTGTCTTGCTGGTTGTGAGATATCCTCTGGCACAGGAAGAAAAATGGTGTTCCAAAATTGTAGCTGCATTCAAACACCAGGAAATTCATCTGCAGTTCTTGGGCTGTGTGACAAAGGAAAAGACTGTTCCATGATGCTACAGTACTTTTTAATCTTGTCCGTGTTCAGTAGTTTCATATTTTCCTTATCTGCCATCCCTGGATATATGGTTCTCCTGAGGTGTGTCAAGCCTGAAGAGAAGTCTCTTGGTGTGGGATTACATGCATTTTGTACACGAGTATTAGCTGGAATTCCTGCACCTATATATTTTGGAGCTTTAGTGGACTCCACATGTTTACACTGGGGAACTTTGAAGTGTGGTGAGTCAGGGGCATGCAGGATATACGATTCCAACAGCTTCAGATACATCTATCTTGGAATACCGGCAGCACTAAGAGGATCAAGCTATATTCCAGCCTTTTTGATCCTCTTTATTTTGAGGAAGTATCGACTACCTGGGGAAAATGCCTCTTCAGAAACTATGCTTGTGGCAAAGTTTACAGGGAAGGAAAATGAGGGCAAAGAAATGGATCAAAATGCCAAAGTTTTGAATGACGATGAATTGAAAACAAAGCTGTAATACTCTTTTATATTATGCTTTCCAGAATTGGAAAACACAATACAACTTAATCATTTTTAAAATCAATAGAGGTATGGCAGATAACTTTTCCTTATTTTTAAGAACCTTAACATTTTTTTTTTTAACTCAAGAAGAAAAAATATTCATGATAGTATTTCTGAGGCAACAATGGCATTTGAGATTTTCCTCAGAGAGACATTTATAAACAAAACAGGATATTAGAACCAGCTTTATTTTCATGTTAAATTGTTAAAACAACAATTTTTCTTTTAACTCATGCAAAATATTTCCCACATCTCTTCCAAATGATTTTTGAAAATTTCCTATTATGAAAATCTATTTAATTCTATTGAAATCCTGCTTTGATATCATGATTATTAGGAGACTGAAATTCTTTTCTTCGTATGTGAATATTTAAGGATTTTGCTCAAATTTAAGTGAACAAAGTGAAAGAGGTGAACAAAGTCAAAGACTTTAAGTGAAAGAAGCCTAAATATTTTTTAATTCTATTTTGGAATTTTTCTTTAACTCTTCCTATTCATTCCAGAAATGATTCTTTTAAAATAGATTATGAAATTCTGTCCTTTATAAAATAAAGGACAGAAATGGTATGGACCTAACTGAAGCAGAAGATATTGAGAAGAGGTGGCAAGAATACATAGAAGAACTATACAAAAAAGATCTTCATGACCCAGATAATCATGATGGTGTGATCACCAACCTAGAGCCATTTTGGAATGCGAAGTCAAGTGGGCCTTAGGAAACATCAGTATAAACAAACCTAGTGGAAGTGGAGGAATTTCAGTTGAGTTATTACAAATCCTAAAAGATGGTGCTGTGAAAATGCTGCACTCAATATGTCAGCAAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAAGGCAATACCAAAGAATGCTCAAACTACCACACAATTGCACTCATCTCACACGCTAGTAAAGTAATGCTCAAAATTCTCCAAGCCAGGTTTCAACAGTATGTGAACCGTGAACTTCCAGATGTTCAAGCTGGTTTTAGAAAAGGCAGAGCTACAGGGTGGGAAGATTTGGGAGAATGACATTGAAACATGTAAAATATCATGTAAGAAACGAGTTGCCAGTCCAGGTTCGATGCACAATACTGGATGCTTGGGGCTAGTGCACTGGGATGACCCAGAGGGATGGTATGGGGAGGGAGGAGGGAGGAGGGTTCAGGATGGGGAACACATGTATACCTGTGGCGGATTCATTTTGATATTTGGCAAAACTAATACAATTATGTAAAGTTTAAAAATAAAATAAATT EMBV3_00916 CTAGGCCTCGGGGGGTCTCTTGTTGGTCATGATGCAGAGAACATTACCGGTTTCTACTTT Gene GeneID:512082|PIK3IP1:NM_001075552:56_cdna Constitutive 1 NULL GeneID:512082 17 GENE PIK3IP1 NULL phosphoinositide-3-kinase interacting protein 1 EMBV3_30866 TATGGGCTGCAAGCCTAGAAATGCCAAAGAGCGCCCAAAGACTGGAAGTTGGAGAGAGGT Gene BVT0102_196473 + 0 NULL GK000009.2:13551863-13660702 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00234750 TCONS_00234752 TCONS_00234751 1 XLOC_144093 NonCoding TCONS_00234750 XLOC_144093 NonCoding NonCoding - 9:13559529-13620867 - TSS176174 831 0.202166064981949 4 0.98651711039014 0.000261911345749328 8.55256478889165e-11 3.7705331324915e-08 3.3543887784466e-08 0 0 0.000259190572366879 0 0 1.76162861862e-08 0 0 0 0 0 0 0 0 2.56203375561744e-08 0.000415382091383163 0 0 0 0 0.000128721059355124 3.07489835660486e-08 0.000149801466016211 0 0 0 XM_002700513.2 HCN4 PREDICTED: Bos taurus hyperpolarization activated cyclic nucleotide-gated potassium channel 4 (HCN4), mRNA. 1e-31 141 97.59 0.098676293622142 0 noncoding 0 0 0 0 -0.234969937863087 0.341985820862844 -0.00418252450270264 0.929798471796705 CGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTTGCACAGAGTCGGACACGACTGAAGCAACTTAGCAGCAGCAGCAGCAGCATGATCATTGAGGGCTGATGCTTTTTAAATTGGTATCTTATCCATTGCTTTTTTTTTTTTTTGCATTATTTAAAATGGTGGGGGTGAAGAGGTTTTCTGGTTGAGCCCTGGTTATGGATTGAATCATGTTCTCCAAAAGCCATGTGGAAGTCCTAACCCTTGGTACTCCAGAATGTGACCTTATTTGGAAATAGGATAGTTGCATTATAAAAGAAGATGGCTGCGTGAAGACAGAGAGCCAGAGGGAGAATTCCACGTAACTACAAAGGAAGAGATTTGAGTTATGGGCTGCAAGCCTAGAAATGCCAAAGAGCGCCCAAAGACTGGAAGTTGGAGAGAGGTTATTGTGATATATTGAGTACAGTTCTCTGTGCTATACAGGCAAAGCAGGAGCTAAAGGTGCTTCTCACACAGCAGAACACTGGTGTCCTTGAACGATCCATCCACCACAGGATTATGGGCCTCGGAAAAGGCAGGACCCATATCCAGCTCAGGGTCCAGTGTTGGTGATCTTCAAAGGACATCCTCAACCCACTTTCACATGGACACCCCTTACGACCAACTGCTGCTCTTGAAGGCTTTATTCTGGGACCGGTGGTGGGCAATATAGAAATGTGACCCAGAAGATACAGAAGTCAGTTAAAAAATATATTAACTAAATAAAAAGAAACTTTGTGTCCAAGAGTGAAAATCATTTTCTCTTATTCCCATTCTAACTTTTATCCAGCTGTGTGTCATCATCTATTGAT TCONS_00234736 TCONS_00234737 TCONS_00234738 TCONS_00234739 TCONS_00234740 TCONS_00234742 TCONS_00234743 TCONS_00234744 TCONS_00234745 TCONS_00234746 TCONS_00234747 TCONS_00234748 TCONS_00234749 s 3' 7519 TCONS_00234736 TCONS_00234737 TCONS_00234738 TCONS_00234739 TCONS_00234740 TCONS_00234742 TCONS_00234743 TCONS_00234744 TCONS_00234745 TCONS_00234746 TCONS_00234747 TCONS_00234748 TCONS_00234749 s 3' 7519 EMBV3_02728 GGGCTCCGTAGACCCCATCAGCTTAGGGTGTGGGACTGCTGTTTCTTGGGTTGTGTTTGT Gene GeneID:533020|CBR4:NM_001083717:2_cdna UTR3_Alt 2 NULL GeneID:533020 8 GENE CBR4 MGC138958 carbonyl reductase 4 EMBV3_41970 GCTCGTTAATTTGGGATATCAAAACGCAGATGAGAACTCCCGTCCACCACCCTCAAGTGC Gene GeneID:512452|C2H1orf144:NM_001046120:141_cdna Constitutive 1 NULL GeneID:512452 2 GENE C2H1orf144 C1orf144 MGC137449 chromosome 1 open reading frame 144 ortholog EMBV3_04380 GATTCCAGGGGGAACCAGGGCTGGGGCAGGAAAAATAGGTCGAATGATTGCTGAGGAAAT Gene GeneID:530705|ARNTL:XM_002693049:332_cdna Constitutive 1 NULL GeneID:530705 15 GENE ARNTL NULL aryl hydrocarbon receptor nuclear translocator-like EMBV3_06195 ATTTCTATGAAGACAGACCCACTTTTTATGTCCATTTGGGTGTTTGTGAGCTTGAGGGGC Gene GeneID:506111|PRPSAP2:NM_001081513:472_cdna Constitutive 1 NULL GeneID:506111 19 GENE PRPSAP2 MGC155122 phosphoribosyl pyrophosphate synthetase-associated protein 2 EMBV3_15261 CCCTGCTCCGCGCCCCGGGCGCCTTCGCCGACGGTGGAGAAGACGGTGGAGCACCTGGAG Variant GeneID:510496|PLAC9:NM_001038521:296_cdna 97^194 1 EMBV3_39577 GeneID:510496 28 GENE PLAC9 MGC134235 placenta-specific 9 EMBV3_25086 AAGTCCAGTGCCATGTTAGACCGACAGAAAAAGCTAAACCCCCAGAAAGGGTCTGATACC Gene GeneID:616772|LOC616772:XM_002695647:89_cdna Constitutive 0 NULL GeneID:616772 19 GENE LOC616772 NULL hypothetical LOC616772 EMBV3_17359 AGCAAAAGTAAGATACAGGAGAGTGGCATTTGGAACCGAAGGGTGCAAGGCACCTGGTGG Gene GeneID:100294795|LOC100294795:XM_002690367:19_cdna Constitutive 0 NULL GeneID:100294795 9 GENE LOC100294795 NULL similar to tubby like protein 4 EMBV3_39750 CTGCTGACATGAGGGCAGGTCGCACTGTGTAGGTTCTGGGTGAGTTTCCTGTCTCTGAGA Gene BVV0101_027485 + 1 EMBV3_22250 GK000008.2:23279893-23287272 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00230203 1 XLOC_139695 NonCoding TCONS_00230203 XLOC_139695 NonCoding NonCoding - 8:23159761-23160255 - TSS171707 494 1 TCONS_00230203_1 45 1 0 0 0 0 0 0 0 0 0 0 0 0 3.61911580002723e-06 0 0 0 0 0 0 0 0 0 0.00393065658952653 0 0 0 0 0 0 0 0 0 noncoding AGGGCTTTGCTTTGGGCTGTTTCACTGTAAAGATTTGGAAACTGCCTCAGAGACAGGAAACTCACCCAGAACCCACACAGTGCGACCTGCCCTCATGTCAGCAGGGTGGGGCAGGGGCCCACGGAGGCTTGTTCAGCAGCTGCAGCCAATGTGTTGTCCTTTTAACTTTCTTCTCAACCTTAGGTTGGCCCGACTCAATGCAGCCCTGACAATGACTATGAGAATTAAATGAGTTCAGCTCATAGGACGGCCTGGAATCTGAAGGGAAAAGTAAATGCAGGCTTGATGCAGACACGCATGTTGTGAAAGGGCCAGTCTGAGTGCCCAGCAGCAGCGGGTCTGGCAGCAAACAGTGAAGACAATGCCTGGGCTACTCTTGCCTGTTCCTGGGCCATCGACCCTCTGATGGGAGCATTCTGAGGGTGACAGGATGCAGAGTGTAGGATCCTCTGGTTGGTTATGTTCTGGAGGAGTTAGAAGAGCTAGGCAGAGAG TCONS_00224677 . 5' 5405 TCONS_00224677 . 5' 5405 EMBV3_35832 GGACTGGCGGCTATTGAGGTACTTGGTCTGATATTTTCAATTGTCCTGTACTGCCAGATG Gene GeneID:617508|TSPAN8:NM_001079629:20_cdna Constitutive 0 NULL GeneID:617508 5 GENE TSPAN8 TSPAN-8 tetraspanin 8 EMBV3_04786 GCTATCGCACTTTATAACTGCTGTGATCTCTACACAAGTGCTGTCTGTGTCTAAAGCTGG Gene GeneID:531921|SLC28A2:XM_002690906:177_cdna Constitutive 0 NULL GeneID:531921 10 GENE SLC28A2 NULL solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 EMBV3_18944 CTGACGGCCTCTTCACGGACTACTACAGCAGGGCCAGGTCAGCCGAGCAGATCACAGACA Gene GeneID:100125923|SCO2:NM_001105493:5_cdna Constitutive 1 NULL GeneID:100125923 5 GENE SCO2 MGC165812 SCO cytochrome oxidase deficient homolog 2 (yeast) EMBV3_19981 CCATTGGGTTTTATTCAGTTAAGCCTACAGCTTGCAACCAGTACTTTGAAAAATATCCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20388 ACAGAGTGGGTTTTGGACGAGCTGGTGGCCAAATTGGAAGACCCGAGAGAGAAGTGTTTT Gene GeneID:493686|TLR7:NM_001033761:5_cdna Constitutive 0 NULL GeneID:493686 X GENE TLR7 NULL toll-like receptor 7 EMBV3_07084 GGAGGAGACTGGGAGGTGAAATGGGGAGGTGAAATTGTTTGGGCCTGAAAGACTGAGGAT Gene GeneID:504963|DPT:NM_001045903:93_cdna UTR3_Alt 2 NULL GeneID:504963 16 GENE DPT MGC138044 dermatopontin EMBV3_14095 ACGGCTACCAGATCCCCAAGGGGTGGAACGTGATGTACAGCATCCGAGACACGCACGAGA Gene GeneID:539048|LOC539048:XM_002698476:524_cdna Constitutive 1 NULL GeneID:539048 26 GENE LOC539048 NULL similar to cytochrome P450, family 26, subfamily C, polypeptide 1 EMBV3_32030 GGTGGCATGGTTGGTGAACAATGTGGGGTGGTGTTCAGCTCGAAAGCGTTTCTGATTCCA Gene GeneID:534041|MICAL2:XM_002693051:338_cdna Constitutive 0 NULL GeneID:534041 15 GENE MICAL2 NULL microtubule associated monoxygenase, calponin and LIM domain containing 2 EMBV3_15105 AAGCCCATGCACTTTACCATCCAGGCCTTCACTTGGCCTGTGGACTTTAGACTCATGTTC Gene GeneID:508158|AHCY:NM_001034315:940_cdna Constitutive 1 NULL GeneID:508158 13 GENE AHCY MGC128223 adenosylhomocysteinase EMBV3_39732 AAGAAGTGGAAGCGCTGATGGCAGGTCAGGAAGACTCCAATGGCTGCATCAACTATGAAG Gene GeneID:317657|MYL1:NM_001079578:20_cdna UTR3_Alt 2 NULL GeneID:317657 2 GENE MYL1 MGC155238 myosin, light chain 1, alkali; skeletal, fast EMBV3_43101 GAGAACACACACTGGAAAGAAACTCTAGTAATAGCACAAGTGATGGAAGAGATTTTCCCT Gene GeneID:100140452|LOC100140452:XR_083947:8_cdna Constitutive 0 NULL GeneID:100140452 18 PSEUDO LOC100140452 NULL similar to Zinc finger protein 208 EMBV3_27046 AGCTAATGAACTCAGCCCTCAAAATGTGGTCACTCCCCTCCAAGCGCCTGCCCAATTCTA Gene GeneID:789060|MGC134331:NM_001110188:69_cdna Constitutive 0 NULL GeneID:789060 11 GENE MGC134331 NULL hypothetical protein LOC789060 EMBV3_26308 TCTCTTAGCCCACTGTCTCCCTAGTGTATGTTATGGGTCACGGGAACAGAAAGTGTGTGG Gene GeneID:535704|FKBP5:XM_002697201:80_cdna UTR3_Alt 2 NULL GeneID:535704 23 GENE FKBP5 NULL FK506 binding protein 5 EMBV3_04733 CCCTCAGAATTTAGAGAGTCAAACAAGAGCTTCATTCAGGCTTGTGAGGGCTGCTACAAG Gene BVT0101_039735 + 1 EMBV3_08601 GK000010.2:65778728-65905384 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20170 CTTGAAATTGCAGTAACATTGTGAGCTGGCTCAAGACAAACCAATTAAGATGTAGATAGG Gene GeneID:617808|LOC617808:XM_002694923:814_cdna Constitutive 2 NULL GeneID:617808 18 GENE LOC617808 NULL hypothetical LOC617808 EMBV3_27962 TAACCAGACCTCATCTTGGAGGGCGGAATGAGATAGCAACTAGGAAGAACATGCTGCTGG Gene GeneID:511317|TFAP2C:NM_001075509:991_cdna UTR3_Alt 2 NULL GeneID:511317 13 GENE TFAP2C MGC143174 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) EMBV3_29865 ACAGAGGTTCTCTTGGCCGTCTGCACCAGCGACTTTGTCGTCCGAGGCTCCATCCAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13540 GGTAGTGTCACCTGAACACGGGGGAATGGAGGGAAATGGCCCTGGAGAGGCCCTGAGAAA Gene BVT0102_425183 + 0 NULL GK000030.2:18794169-18812288 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36596 CTCAATAGCCATGCAGAGGCGAATATTGGTAAACCTCAGGATCGTGGACTACAAGCTGGC Gene GeneID:100138847|LOC100138847:XM_002699457:18_cdna Constitutive 0 NULL GeneID:100138847 X GENE LOC100138847 NULL similar to chromosome X open reading frame 61 EMBV3_10978 TAACGACACAGAAACATTTGAGCATTGTATTTCTCGCATCCCTTCTCGTGAGCGCTAGGC Gene GeneID:617316|ELAVL1:NM_001076454:105_cdna UTR3_Alt 2 NULL GeneID:617316 7 GENE ELAVL1 NULL ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) EMBV3_09283 GAAGTCCTTCTGTATGAAGTCAACCCTCACAGTACACCAGGAAACACCACAGGGGAGAAG Gene GeneID:100140207|LOC100140207:XR_084073:602_cdna Constitutive 0 NULL GeneID:100140207 25 PSEUDO LOC100140207 NULL similar to zinc finger protein 33B EMBV3_36576 CCTTGAAGAGGTTGCCCCCTGACCTGGAAAACGCCTGTGCCATGAACCAGCCGGCCCCCG Variant GeneID:615340|IRF5:NM_001035465:24_cdna 171^242 1 EMBV3_43263 GeneID:615340 4 GENE IRF5 NULL interferon regulatory factor 5 EMBV3_03166 CAGGAGGCCTGTTTCTGCTGCTGGGCCGCAAGCGGGACTCTGAATACCAGTCCATAAATT Gene GeneID:100125876|C3H1orf85:NM_001105476:8_cdna Constitutive 1 NULL GeneID:100125876 3 GENE C3H1orf85 C1orf85 MGC139483 lysosomal protein NCU-G1 EMBV3_17673 GTTTGCTACACTGACCTCTTGTGGTCTCGATTAGGTTCCAGTCAACCGTGTGAACCATGC Gene GeneID:505134|ADAR:XM_002686013:400_cdna Constitutive 1 NULL GeneID:505134 3 GENE ADAR NULL adenosine deaminase, RNA-specific EMBV3_01789 TTGACCCCGGCTTGACTGTGACCGTTTCAGAACGACATGGAACCCAGCAAAGCCGTTCCC Variant GeneID:516024|VAPA:NM_001075733:113_cdna 411^595 1 EMBV3_12049 GeneID:516024 24 GENE VAPA MGC140014 VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa EMBV3_28088 ATGACATCGCCAAGGCAACTGGTGGCTGGAAGGGTCTGAGGATTACAGTGAAACTGACCA Gene GeneID:786929|RPL12:XM_002688552:181_cdna Constitutive 0 NULL GeneID:786929 7 GENE RPL12 NULL ribosomal protein L12 EMBV3_09700 GAGATCCAAATGATGCGTATTTCAGAGTCTGGTGATTATAATGGGTTTTTAAACATTTGG Gene GeneID:784845|PL-5283:NM_001130930:35_cdna Constitutive 1 NULL GeneID:784845 4 GENE PL-5283 NULL PL-5283 protein EMBV3_15079 CCAGACCCCGTCAAGATCCCAACAAGGCTGGACTGAACCACTACGCAAAACTCTTTAGCT Gene GeneID:513195|CENPT:NM_001101969:219_cdna Constitutive 0 NULL GeneID:513195 18 GENE CENPT MGC151532 centromere protein T EMBV3_31870 TCCTTCGTAGGTGTCAGTATTAGTTGCTGATTAATGCTCCCACTTGATGGAGAAGTTGTG Gene BVT0101_017421 + 0 NULL GK000014.2:17186539-17195630 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052827 TCONS_00052837 TCONS_00052826 TCONS_00052832 TCONS_00052836 TCONS_00052831 TCONS_00052829 TCONS_00052824 TCONS_00052830 TCONS_00052828 TCONS_00052833 TCONS_00052835 TCONS_00052825 TCONS_00052838 TCONS_00052834 1 XLOC_031589 Coding TCONS_00052830 XLOC_031589 Coding Coding TRMT12 14:17193062-17197461 o TSS39125 671 1 TCONS_00052830_1 110 2 0.847885402455662 0.000177499008172225 1.42762632688243e-65 0.000298331653754384 1.59496232131976e-06 1.56792472847594e-47 2.85538344451441e-89 8.73593819866115e-05 3.98853861179497e-28 3.59584907021067e-44 4.55947169612049e-59 1.48152241416089e-76 2.34332638654364e-98 9.19502789678315e-05 0 4.62056459607808e-93 0.000713901015650415 0 7.02275706508668e-38 5.57486603745486e-59 3.95953210481068e-182 0.000875522016093522 0.000274433302047763 0.000301324474884549 0.000692935249221132 5.51803089948445e-143 1.27022455269027e-144 4.45395299082657e-52 3.18009025236645e-07 6.70530265829959e-67 7.09879437126503e-33 XM_005215364.1 TRMT12 PREDICTED: Bos taurus tRNA methyltransferase 12 homolog (S. cerevisiae) (TRMT12), transcript variant X1, mRNA. 9e-177 623 100.00 0.512667660208644 NM_017956.3 TRMT12 Homo sapiens tRNA methyltransferase 12 homolog (S. cerevisiae) (TRMT12), mRNA. 2e-89 333 82.82 0.482861400894188 TCONS_00052830_1 sp|Q58D65|TYW2_BOVIN TYW2_BOVIN tRNA wybutosine-synthesizing protein 2 homolog; 1e-65 208 99.03 0.927272727272727 0 coding 1 1 1 1 1.95005503566538 0.0475839571551169 -0.174457402487322 0.0856272805086166 GAGTTTCGTGGAAGGAGTCGGAGAGACTGTGGGGCCAGCAACATGGAAGGGGCAGGCGGGAAGCCCACGGCTGTTGTTGCAGTTGTGACTGAGCCTCGATTTACTCAGCGATACAGGGAATATCTCGAGAAGCACAAACTCCTGGATAGACAGCACCGTGTGAAAAAGCTGCGGGATGGCACCGTGGCGCTACCGGTTCTGAGAGAGGCCCTCCTTGAGCAGCATCTACGAGAGCTGAGGAATCGTGTGGCTCCAGGCAGCACCTGTGTGCCGACGCAGCTCCTGGATCCTGTTCCTTCAAAGAAGGCCCAGAGTTACTCACCTGCCCAAAGGCTGTGTCTTGAGTTTTCTCCAAGCACTTGCCGGATGGCCTGACCCAGAAGAGACGTCTAATGAAACCAAGGAAAAAAGACTAAAGGAGTCAGGAGGCTCACTGAGTTCCTTACAGATTCAATCTAGGAATTTGTAGAAGCTCTAAAGCTTTCCTTCGTAGGTGTCAGTATTAGTTGCTGATTAATGCTCCCACTTGATGGAGAAGTTGTGATTAAAAAGCAATAATTTTATCAAACTCTTAACTGTAAGCTGTATTCATTAACTCCATAATTTTAATAAATTATATACTTGTATTAATATACCAGTATCATGTATAATTTTAAATATGCAAATTTAAA TCONS_00052840 s 3' 2243 TCONS_00052840 s 5' 0 EMBV3_02253 CAGGCCTTCATTGCTGGCTCTTGGATGTCCTTCGTGATCCTCAGGCCTTGTTTCAGAGTA Gene GeneID:540229|HSD3B7:NM_001034696:371_cdna Constitutive 0 NULL GeneID:540229 25 GENE HSD3B7 MGC129037 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 EMBV3_27131 CTGTGGGAGTTTGGGAGCTTTTAATTAGCAAGTTGGATCCGAAAGAGTTTGTGGCGAAGG Gene BVV0102_314628 + 1 EMBV3_27176 GK000010.2:76109268-76151135 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022260 1 XLOC_012930 NonCoding TCONS_00022260 XLOC_012930 NonCoding NonCoding - 10:76109505-76111189 - TSS16150 1684 1 TCONS_00022260_1 103 0.114608076009501 1 0 0.000153508485661724 0.000393822248140628 8.79239831331247e-05 4.93119997118718e-06 4.39772164506825e-05 0.000233655402578384 0.000169687006403105 0.000207226069280357 7.49656190861744e-05 0 0 0 0 0 0 0 0.000128164906811904 0.000372489599460672 8.51654313241242e-05 6.40566959602595e-05 0 0 0 0.000547539659086109 1.23428910622495e-05 4.18377582821068e-06 0 0 1.72967213033474e-05 0 XM_005198818.1 ANKLE1 PREDICTED: Bos taurus ankyrin repeat and LEM domain containing 1 (ANKLE1), transcript variant X1, mRNA. 2e-11 75.2 92.16 0.0296912114014252 0 noncoding 0 0 0 0 -0.638701848616341 0.040266294140975 0.0308829554531958 0.651243851594107 GAGAGGAACCCGGATGCAGCCGCGTTCTCAGGCCGCGCTGCCGCCGCTTCCGCCAAGCAGTAGGGTAGGCCGAGGAAAAGAGCTGCTGCAGCGACTAGGCCTAACTGGAGCTGCTAAAGCTCGGGAGGTGTGCAGCGGACAAAAATACGAAGGGTTTCTGTGCAGTGCGGAACCTCTGGGCGGCGGTCGTCTGCAGCTTGAGGATTCCGAGGGCAAGGGTCGGGTAATTCCCGGCCCTCGATTCCGCCCTTTTCAGCCGCGAGACTGGCCCTTCTGGGCTCGAGTAGTCCACTCGCGACGGGAACCAGCGCCGCTGCTCGTGTAAATGGGCCCTTCGCGGCTCGCGGCCGTAAACCCCCAGCAGTCGCTCTCCGCTCCACCTTGTGGGAGGCCTGGCACCGAAATCCGAACCCCTGGGGCCCGGCCAAGGGTTGGATATCGCTTCGAATTCTCTCTCGTCCTCGTCTCCTTTTTCCTGAACCTCTTTTGAATGTCAGCTCTCTGGAGCTGCTGCAAGCCTGGTTGGGGCCAGGTCGGTGTGGCGGGCGCAGGTGGGAACGCTGTCTCTAAGCCCCGAGATCATTTACTGAGAACCGCCGCTTGGGCTCACCCGCTGCACGGAGCTCAGGGAAATCCAGCTCCAAACTGTGGGAGTTTGGGAGCTTTTAATTAGCAAGTTGGATCCGAAAGAGTTTGTGGCGAAGGCTTCACTTAACTCTAGCTGGAACAAGTGATTAAATATTTAGAGAAATGGTTGCATTCTTAGTGAGCCCTAGGCCAAGTGGTGAAGTCCAAGGGGTCTCAAAGAGTCGGACACGACTGAGTGACTGAACAGGCGACGTGGTGCATTACCAGATAATATTCTTGAACCGTTGCTCTATTCGACTGCATGCTACATTTGTCTTTTGAGAGGGTGAAAAAAAAAAAAAAAACTCTTAAGTACAAATGCCAAGGTACCAAATGTTCAAAACTTGGAAAATGAGAAAAAAAAAATAGCATTTATAATCATTGAACCCAGGGACAACCACTGTTCGCATTTTGATGTGCTTCTCTCCAGCATTTTCTTCCTTAAAATTTGTCTATTCCGTTCTGTAGACTTTTAATTTTTCCACTTGGCATTATATCGTGTTTTCCATGTAAGTAAAACTGTACCATGCATACAACTAACAGCAGGAAAAAGAAATGCTTTTATTTCTCTTGTTTGTGTTGTTTAACACTCAAGCGTTGCAAATTTCTATGCATATCCCCAGAAATGAGTCTTGAATGAAAAAAAAATTTGTCATTAAAAAAAATTTTAAGTGATATAGGAAGCCGAAAATGTTGGTGCTCTTAGACGGAAGCGGGCTTCCCCTACTGGCTCCAGATGATTGGCCACTATAGGTGGTGTCTGTGTTTGCTCTGAAAAGTTCCATCTCCCCTAAGCATTATAAAACTGGCTAGAATACCAGTCTCCCTCCCACCTTCAAGCAACTTGCATTTCCACATCTCAATTTCCCATACCAGTCTTCATGAAAAATTCAGTGTCCCAGCCATGCAGTACTTCTTTGCTCAATTTCTGATTAAGGGTAAATGTAGAATTTAAACCAGAGAAGATTTTAAAACCAACTCAGTTTCCCTTGGCAACAATTGAACTGTCAAAGAGTAGTGCTTGTTTGAAATGCTCACAGCTGTTGCTTAGAATATT TCONS_00017889 . 5' 143 TCONS_00017889 . 5' 143 EMBV3_16558 AGGAGGACTTGTCTCTTTGTCCGCCTCCTCCTCCGATGTACCCCCAATTGACCTGTCCCT Gene GeneID:527572|GPR37L1:NM_001075899:81_cdna Constitutive 0 NULL GeneID:527572 16 GENE GPR37L1 MGC140662 G protein-coupled receptor 37 like 1 EMBV3_01420 ACCATCTCATGGCCCTTTGAGTAGTAAAACCAGCATTTGTTCCCTCACCAGACCCCATGC Gene GeneID:519058|EDEM3:XM_002694246:208_cdna UTR3_Alt 2 NULL GeneID:519058 16 GENE EDEM3 NULL ER degradation enhancer, mannosidase alpha-like 3 EMBV3_08360 CTGAAGGGCTACCTGCCCGGGGCCGGAGAGGTCCTGCAGGAGGGAGCTGAGAGCCTCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03225 CGTTTTGGAGATGGGAGCCACTAAGGTGGTGTGGGAAGGGTTGGCATTTGTGAGATGTAT Gene GeneID:512320|NUDT16:NM_001075560:30_cdna UTR3_Alt 1 NULL GeneID:512320 1 GENE NUDT16 MGC148824 nudix (nucleoside diphosphate linked moiety X)-type motif 16 EMBV3_10917 GTGCTTCAGCATTGTGGTCCATGTGTTGTTGTGATATGTTTAAGAGCAGAAACACTCAGG Gene GeneID:514603|SEPT10:NM_001046176:107_cdna Constitutive 0 NULL GeneID:514603 11 GENE SEPT10 MGC128534 septin 10 EMBV3_26205 TTGCCGCTCTGGCCTTTGTTCTTGAGGGTGGATCTTGGTTCTGTTGGTGTGTTCGTGACA Gene GeneID:539289|LMAN2L:NM_001014953:89_cdna Constitutive 3 NULL GeneID:539289 11 GENE LMAN2L MGC129002 lectin, mannose-binding 2-like EMBV3_15952 TGTTTCTTGCTGTGTTTTTTTCCAAAATGAGTTGGATGAATTTATACCCCACGACCAGTG Gene BVT0101_061483 + 0 NULL GK000012.2:52352152-52421740 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040023 1 XLOC_023840 NonCoding TCONS_00040023 XLOC_023840 NonCoding NonCoding - 12:52420122-52420870 - TSS29524 748 1 TCONS_00040023_1 45 0.71524064171123 1 0 0 0 0 0 0 0 7.79640338616088e-06 0 0.000210966421252156 0 0 9.56063955639125e-06 3.83593509911773e-06 0 0 0.000423715204416373 0 0 0 0 0 2.97621045168706e-05 0 2.24126177659456e-05 0.000129677303767589 0 0 1.28411346848514e-05 0 0 XR_228393.1 LOC101902851 PREDICTED: Bos taurus uncharacterized LOC101902851 (LOC101902851), 8e-20 102 78.52 0.171122994652406 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 6e-28 129 79.35 0.197860962566845 0 noncoding 0 0 0 0 -0.151513918209841 0.452631196214236 0.0200427279725445 0.662966479363921 AGAAATGAAATATTATACATGCTACAATACGGATGAACCTTGAAAACGTAAGGCTAAGTGAAAGAAAGCCAGTCATAAAGGACCGCATATGATTCCATTTACATGAAATGTCCAGAAGAGGCACATCTACAGAGACAGAAGTAGATCAGAGACTGCCTAGGACTGGCTGGGCTAACGTTTTGGAGGGTGACAGCTAAGTGGGACATGGGACGGTAGTGAAAGTGTTCTAAAACTGACTGAAGTGATGAACGCACTGTGAACTGTATCATACATGAATTATATTTCAATAAACTATTACACTGGTCGTGGGGTATAAATTCATCCAACTCATTTTGGAAAAAAACACAGCAAGAAACATTAAAAAAAAAAAAAAATCTGAACTCTTTGACCTAGCTCTTCCACTTCTTTATTTAATTTGACCAAAGGAAGGAATTAACAGAAGTAAAACTATGTGCAAAATAGTTCATTTTTTTTAAATCAAAGGAAATAGTGGAAACAAGTTAAATATTCAACCATAAAAGAACTATGAGGCAAATGTTGGCCTATCAACAAGAAAGAAAACTAAGTAGCTAAAAGTTCATTAGTTCAGCTGGTAATTACTGAGTGTCTTAAATGTTAAGAACTGGTTTTAGGATGATAGAGAGTCAACAGGAACAAAACATCCTTATCCTAACAGAAAGCCAGCAGATAATTAAACAAGAACACTCTGCAAGTGTTAACAAGGAAATTAGGGAAGAATTTCCAAAAC TCONS_00035352 . 5' 871 TCONS_00035352 . 5' 871 EMBV3_40657 ATTCATCTCCCTCATTAGCACCAAGTGTACCCTCCTGGCCTCCATGGCCTGTGACCGCTA Gene GeneID:520180|LOC520180:XM_002695478:201_cdna Constitutive 0 NULL GeneID:520180 18 GENE LOC520180 NULL similar to olfactory receptor Olr4 EMBV3_06781 ATTTGCTCTCGGCCATAGGCTTCTGTCACCTGGGTTAAAAATCTCTTCCGCAGCCTCCCT Gene BVV0102_372731 - 1 EMBV3_16345 GK000015.2:81813277-81817409 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12329 GTTTCCTTGTTTTCCACTCTGACAAATGCAACATGAATGGGAAAGAGGCGCCCAGCTGCC Gene BVV0102_264986 + 0 NULL GK000005.2:30952227-30967269 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191435 TCONS_00191436 TCONS_00191431 TCONS_00191434 1 XLOC_116920 Coding TCONS_00191435 XLOC_116920 Coding Coding MLL2 5:30931916-30964911 j TSS143457 17210 1 TCONS_00191435_27 3495 56 0.480087288597927 2.04251433483024e-41 1.05066874560545e-10 3.0869976502446e-37 1.74345461096791e-09 1.51108973031318e-09 1.29965120554448e-32 1.44689086162154e-09 1.37554400438595e-09 1.09948649779121e-09 1.528386086435e-05 1.42405160208122e-08 8.17130839263484e-10 7.63380655773781e-10 3.77494688124837e-05 2.70983068372586e-10 5.51358060774927e-07 4.34722742629481e-09 0.000850033835810371 3.0519375088252e-05 5.29440919440066e-29 2.68887696117373e-08 0.000137105884465744 0.000180660652091287 0.000415518202149047 8.98405684567754e-16 3.14568869010159e-11 2.74877097029072e-05 2.64214199479558e-11 1.35308979541092e-14 2.10530909569005e-06 XM_583302.6 KMT2D PREDICTED: Bos taurus lysine (K)-specific methyltransferase 2D (KMT2D), mRNA. 0.0 2.011e+04 99.99 0.648169668797211 XM_005269162.1 KMT2D PREDICTED: Homo sapiens lysine (K)-specific methyltransferase 2D (KMT2D), transcript variant X1, mRNA. 0.0 1.590e+04 90.75 0.665601394538059 TCONS_00191435_27 sp|O14686|KMT2D_HUMAN MLL2_HUMAN Histone-lysine N-methyltransferase MLL2; 0.0 2672 92.78 0.447496423462089 0 coding 0 0 0 0 -0.0818877099921546 0.603673808510676 -0.00228347495753733 0.964036590084445 ATGGACAGCCCGAAGCCGCCTGGTGAGGATAAAGATTCGGAACCAGCAGCTGATGGACCTGCAGCCTCCGAGGAGTCAGGTGCCACTGAGCCAGACCTTCCCAAACCACATGTTGGGGAGGTCTCTGTGCCCAGTTCTGGGGGTCCCCGGCTTCAGGAGCCTCCCCAGGACTGCAGCGGGGGTCCGGTGCGGCGTTGTGCTCTCTGTAACTGCGGAGAGCCCAGTCTACATGGGCAGCGGGAGCTACGGCGCTTTGAGTTGCCATTTGACTGGCCCCGGTGTCCCGTGGTGTCCCCTGGGGGGAACCCAGGGCCCAGTGAGGGAGCGCTGCCCAGTGAGGACCTATCACAGATTGGTTTCCCTGAGGGCCTGACACCTGCCCACCTGGGAGAACCTGGAGGGTCCTGCTGGGCTCACCACTGGTGCGCTGCATGGTCGGCAGGCGTATGGGGGCAGGAGGGCCCAGAACTATGTGGTGTGGACAAGGCCATCTTCTCAGGGATCTCACAGCGCTGCTCCCACTGCACCAGACTTGGTGCCTCCATCCCTTGCCGCTCGCCTGGATGTTCACGTCTTTACCACTTCCCCTGTGCAACTGCCAGCGGTTCCTTCTTATCCATGAAAACACTGCAGCTGCTATGCCCAGAGCACAGTGAGGGGGCCACACATCTGGAGGAGGCTCGCTGTGCAGTATGTGAGGGGCCAGGGGAATTGTGTGACTTGTTCTTCTGTACCAGCTGTGGGCATCACTATCACGGGGCCTGTCTGGACACTGCTCTGACTGCCCGCAAGCGTGCTGGCTGGCAGTGCCCTGAATGCAAAGTGTGCCAAGCTTGCAGGAAACCTGGGAATGACTCTAAGATGTTGGTCTGTGAGACGTGTGACAAAGGATACCATACCTTCTGCCTGAAACCACCAATGGAAGAACTGCCTGCTCACTCTTGGAAGTGCAAGGCATGCCGGGTGTGCCGGGCCTGTGGGGCAGGCTCAGCTGAGCTGAATCCCAACTCTGAGTGGTTTGAGAACTATTCGCTCTGTCACCGCTGTCACAAAGCCCCGGGAGGACAGCCTGTCAGTTCTCTTGCTGAGCAGCACCCCCCGGTCTGTAGCAGATTCTCACCCCTAGAGCCTGGCGCTACCCCCACTGATGAGCCCAATAGTCTGTATGTTGCGTGCCAAGGGCAGCCAAAGGGTGGACACGTGACCTCTATGCAACCCAAGGAACCGGGGCCCCTGCAATGTGAAGCCAAACCACTAGGGAGAGAAGGGGCCCAACTTGAGCCCCAGTTGGAGGCCCCCCTAAATGAGGAGATGCCACTGCTGCCCCCACCTGAGGAGTCGCCCCTGTCCCCACCACCTGAGGACTCACCCACGTCCCCGCCGCCTGAGGCATCGCGCCTGTCCCCACCGCCTGAGGACTCACCCCTCTCTCCACCGCCTGAGGAGTCTCCTCTGTCTCCCCCACCTGAGTCACCACCCTTCTCTTCCCCAGAGGACTCCCCCCCACATCCCCCACTCGATACACCCTTACCCCCACCACCTGAAGCGTCACCCCTGTCCCCACCACTGGAGGAGTCTCCTCTGTCCCCTCCCCCTGAAGAATTGCCTACTTCCCCACCACCGGAAGCATCTCGCCTGTCTCCACCACCGGAAGAGTCACCCATGTCTCCGCCACCTGAAGAGTCACCTATGTCTCCGCCACCTGAGGCCTCTTGTCTGTTCCCACCATTTGAGGAGTCGCCCCTGTCCCCTCCACCCGAGGAGTCTCCTCTCTCCCCGCCACCTGAGGCGTCACGCCTATCCCCACCGCCTGAGGACTCACCCATGTCCCCACCACCTGAAGACTTGCCTATGTCTCCCCCGCCTGAGGTGTCACGCCTGTCCCCCCCGCCTGAGGAGTCTCCCCTGTCACCGCCACCTGAGGAGTCTCCCACATCCCCTCCACCTGAGGCTTCACGCCTGTCCCCTCCACCTGAGGACTCCCCTACATCTCCGCCACCTGAAGACCCGCCTGCTTCCCCACCTCCGGAAGACTTGCTCGTGTCCCTGCCGCTGGAGGAGTCACCGCTGTTGCCACTGCCTGAGGAACTACGACTTTGCCCCCGGCCTGAGGAGCCACACCTGTCCCCTCAACCTGAGAAACCACGCCTGTCTCCTGCACCCCAGGAGCCGCGTCTGTCCCCCGCATCCCAGGAGCCGCGTCTGTCCCCTGCACCCCAGGAGCCGTGCCTGTCCCCTGCACCTGAGGAGCCACGCCTGTCCCCCGCACCCCAGCAGCCGTGCCTGTCCCCTGCACCCGAGGAGCCGCGTCTGTCCCCCGCACCCCAGCAGCCGCACCTGTCCCCGCCTGAGGAACCATGCCTGTCCCCCCGGCCTGAGGAACCGCGCCTGTCCCCTCGGCCTGAGGAACCGCGCCTGTCCCCTCGGCCTGAGGAACCGCGCCTGACCCCCCGGCCTGAGGAACCACACCTGTCCCCTCGACCTGAAGAGCCCATTGAGGAGCCAAGCCTGTGTCTTGCATCTGAGGAATTGCCCTTACTCCTCCCACCCAGGGAGCCACCCTTATCCCCTGTGCTTGGAGAGCCGGCCCTGTCTGAGCCTGGGGAACCACCTCTGTCCCCTCTGCCTGAGGAGCTGCCATTGTCCCCATCTGGGGAGCCATCTTTGTCACCTCAGCTGATGCCACCAGATCCTCTTCCTCCTCCACTTTCACCCATCATCACAACTGTGGCCCCACCAGCCCTGTCTCCGTTGGGAGAGTTGGAGTACCCCTTTGATGCTAAAGGGGACAGTGACCCTGAGTCACCACTGGCTGCCCCCATCCTGGAGACACCTATCAGCCCTCCACCAGAAGCTAACTGCACTGACCCTGAGCCTGTACCCCCTATGATCCTTCCCCCATCCCCAGGCTCCCCCATGGGACCGGCCTCTCCCATCCTGATGGAGCCCCTCCCCCCTCGTTGTTCCCCTCTCCTCCAGCATTCCCTGCCTCCCTCAAACTCACCTCCTTCCCAGTGCTCTCCTGCCCTGCCGCTGTTGGTTCCTTCCCCGCTGAGTCCCATGGACAAGGCAGTGGAGGTCTCAGAAGAGGCTGAGCCACAGAAGATGGAGACTGAGAAAGCCCCAGAACCTGAGTGCCCAGCCTTGGAACCCAGCCCTACTAGTCCTCTTCCATCTCCTCTGGGGAACCTTTCCTGCCCTGCACCCAGCCCTGCCCCAGCCCTGGATGACTTCTGTGGCCTGGGGGAAGATACAGCCCCTCTGGATGGGACTGACACTCCTGGTTCACAGCCAGAGGCTGGACAGACCCCTGGCAGTTTGGCTAGTGAACTTAAGGGTTCTCCTGTGCTCCTGGACTCTGAGGAGCTGGCCCCTGTGACCCCTATGGAGGTCTATGGCCCAGAATGCAAGCAGGCAGGGCAGGGCTCACCCTGTGAAGAGCAAGAGGAGCCACGTGCACCAGTGGCCCCAACCCCACCTATTCTCATCAAATCCGACATCGTTAATGAGATCTCCAATCTGAGCCAGGGCGATGCCAGTGCCAGTTTTCCTGGCTCAGAGCCCCTGCTAGGCTCTCCAGATCCCGAGGGGGGTGGCTCCCTGTCCATGGAGTTGGGGGTATCTACAGACGTTAGTCCAGCCCGAGATGAGGGCTCCCTGCGGCTCTGTACCGACTCGCTTCCAGAGACTGATGACTCGCTATTGTGTGATGCTGGGACAGCTATTGGAGGAGGCAAAGCCGAGGGGGACAAGGGGAGGCGGCGCAGCTCCCCAGCTCGTTCCCGCATCAAACAGGGTCGCAGCAGTAGTTTCCCAGGGAGACGCCGGCCACGTGGAGGAGCACATGGAGGACGTGGGAGAGGACGGGCCCGGCTAAAATCAACTACTTCTTCCATTGAGACTCTGGTAGTTGCTGATATCGATAGCTCTCCCAGCAAGGAGGAAGAAGACGATGATGATGATACCATGCAAAATACTGTGGTTCTCTTCTCCAACACAGACAAATTTGTGCTAATGCAGGACATGTGTGTGGTGTGTGGCAGCTTTGGCCGGGGGGCAGAGGGCCACCTCCTTGCCTGTTCCCAGTGCTCTCAGTGCTATCACCCTTACTGTGTCAACAGCAAGATCACCAAGGTGATGCTGCTGAAGGGCTGGCGTTGTGTGGAGTGCATCGTGTGCGAGGTGTGTGGCCAGGCCTCAGACCCCTCCCGCCTCCTGCTCTGTGATGACTGTGACATTAGCTACCACACGTACTGCCTGGACCCCCCACTGCTCACCGTGCCCAAGGGTGGCTGGAAGTGCAAGTGGTGTGTGTCTTGTATGCAGTGTGGGGCCGCCTCCCCTGGCTTCCACTGTGAATGGCAGAATAGTTACACACACTGCGGGCCCTGTGCCAGCCTGGTGACCTGCCCTATCTGTCACGCCCCCTACGTGGAGGAGGACCTGCTGATCCAGTGTCGCCACTGTGAACGGTGGATGCATGCTGGCTGTGAGAGCCTCTTCACAGAGGATGATGTGGAGCAGGCAGCTGATGAGGGCTTCGACTGTGTCTCCTGCCAGCCTTACGTGGTCAAGCCTGCTGCACCTGTCGCACCTCCAGAGTTGGTACCTATGAAGGTGAAAGAGCCTGAGCCCCAGTACTTTCGCTTTGAGGGCGTGTGGCTGACAGAAACGGGCATGGCGGTGCTGCGTAACCTGACCATGTCGCCTCTGCACAAGCGGCGTCAGAGGCGTGGACGGCCCGGCCTCCCAGGCGAGGCGGGGCTGGAGGGGGCTGAGCCTTCAGAGGTCCTGGGCCCTGATGACAAGAAGGATGGTGACCTGGACACGGATGAGCTGCTCAAGGCTGAAGGTAGTGTGGAGCACATGGAGTGCGAAATTAAACTGGAGGGTCCTGTCAGCCCTGATGGAGAGCCTGGCAAAGAGGAGACCGAGGAAAGCAAAAAACGCAAACGCAAACCCTATCGGCCTGGCATCGGTGGTTTCATGGTGCGACAGCGGAAATCCCACACACGTGTGAAAAAAGGGCCTGCTGCACAGGCGGAGGTGTTGAGTGGGGATGGGCAGCCCGACGAGGTGTTGCCTGCCGACCTGCCTGCCGAGGGCTCTGTGGACCAGGGCTTAGCCGATGGGGATGAAAAGAAGAAGCAGCAGCGGCGAGGGCGCAAGAAGAACAAACTGGAGGACATGTTCCCTGCTTACCTGCAGGAAGCCTTCTTTGGGAAGGAGCTGCTGGACCTGAGCCGGAAGGCCCTGTTTGCAGTTGGCGTGGGCCGGCCAAGCTTTGGATTGGGAACCCCCAAAGCCAAGGGCGATGGAGGCTCAGAGAGGAAGGAGCTCCCGACCTCACAGAAAGGAGATGATGGTCCGGATGTTGCAGATGAAGAATCCCGTGGCCCCGAGGGCAAGGCTGATACACCAGGACCTGAGGATGGTGGCATAAAGGCATCCCCGGTGCCCAGTGACCCTGAGAAGCCAGGCACCCCAGGTGAAGGGATGCTTAGCTCTGACTTAGACAGGATTCCCACAGAAGAACTGCCTAAGATGGAATCCAAGGACCTACAGCAGCTTTTCAAGGACGTTCTGGGTTCCGAACGAGAGCAGCATCTGGGTTGCGGAACCCCTGGCCTGGACGGCAGCCGGACACCGCTGCAGAGGCCCTTTCTTCAAGGTGGACTCCCTTTGGGCAATCTCCCCTCCAACAGCCCAATGGACTCTTACCCGGGCCTCTGCCAGTCCCCATTCCTGGATTCTAGCGGAGTCTTCAGCGCTGGGAGAAGGACGAGGAGTTGGGCCAGCTCTCCACCATCTCACCTGTGCTGTACGCCAATATTAACTTCCCCAGTCTCAAGCAGGATTACCCAGATTGGTCAAGCCGCTGCAAACAAATCATGAAGCTGTGGAGAAAAGTTCCAGCTGCTGATAAAGCCCCCTACCTGCAAAAGGCCAAAGATAACCGGGCAGCTCACCGCATCAACAAGGTGCAGAAGCAGGCTGAGAGCCAGATCAACAAGCAGACCAAGGTGGGCGACATGGCCCGCAAGACTGACCGACCGGCCCTACATCTCCGCATTCCCCCCCAGCCAGGGGCCCTGGGCAGTCCACCTCCTGCTGCTGCCCCCACCATTTTCATTGGCAGCCCCACTCCCCCCGCCGGCTTGTCTACCTCTGCGGACGGGTTCCTGAAGCCGCCGGCGGGCACGGTGCCCGGCCCCGACTCGCCTGGTGAGCTCTTCCTCAAGCTCCCGCCCCAGGTGCCCGCCCAAGTGCCTTCGCAGGACCCCTTTGGACTGGCCTCTGCCTATGCTCTGGAGCCCCGCTTCCCCACAGCACCACCCACCTACCCTCCCTATCCTAGTCCGACTGGGGCCCCTGCACCGCCCCCGACGCTGGGCGCCTCATCTCGTCCTGGGACTGGCCAGCCAGGGGAGTTCCATACTACCCCACCTGGCACCCCCCGACACCAGCCCTCCACGCCTGACCCCTTCCTCAAACCCCGCTGCCCCTCCCTGGACAACCTGGCTGTGCCTGAGAGCCCAGGAGGAGGGGGAAGCAAGGCTGCTGAGCCTCTGCTGTCGCCCCTGCCTTTCGGGGAGTCTCGGAAGGCCCTGGAGGTGAAGAAGGAAGAGCTTGGGGGATCCTCTCCGAGCTATGGGCCCCCAAACCTGGGCTTTGTTGACTCTCCCTCCTCAGGCCCCCACCTGGGTGGCCTGGAGTTAAAGGCACCTGATGTCTTCAAAGCCCCCCTGACCCCTCGGGCATCTCAGGTAGAGCCCCAGAGCCCGGGCTTGGGCCTAAGGCCCCAGGAGCCACCCCCTGCCCAGGCTTTGGCCCCTTCTCCTCCCAGCCACTCAGACATCTTTCGCCCTGGTCCCTACCCTGACCCCTACGCCCAGCCCCCGCTGACGCCTCGGCCCCAACCCCCACCACCTGAGAGCTGCTGTGCCCTGCCTCCCCGCTCACTGCCCTCTGACCCTTTCTCCCGAGTGCCCGCCAGTCCCCAGTCCCAGTCCAGCTCCCAGTCCCCATTGACACCCCGTCCTCTGTCTGCTGAGGCTTTCTGCCCATCCCCTGTTACCCCTCGCTTCCAATCCCCTGACCCTTATTCCCGTCCACCCTCGCGCCCTCAGTCCCGGGATCCATTTGCCCCATTGCATAAGCCCCCCCGCCCCCAGCCCTCTGAAGTTGCCTTCAAGGCTGGGCCTCTAGCCCACACTCCGCTGGGGGCTGGGGGTTTCCCAGCAGCCCTGCCCTCAGGGCCAGCAGGTGAGCTCCATGCCAAGGTCCCAAGTGTGCAACCCCCGAATTTTGCCCGGTCCCCTGGGACCAGTGCATTTGTGGGCGCCCCTTCTCCCATGCGTTTCACTTTCCCTCAGGCGGTCGGGGAGCCTCCCCTAAAGCCGCCTGTCCCTCAGCCTGGTCTCCCTCCACCCCATGGGATCAACAGCCATTTTGGGCCTGGCCCTACCATGGGCAAGCCTCAAAGCACAAACTACGCAGTAGCCGCAGGGAACTTCCGCCCATCGGGCAGCCCCCTGGGGCCCAGCAGCGGGCCCGCAGGAGAGGGCTACGGGCCGTCCCCACTGCGCCCCCCGTCAGTCCTGCCCCAACCCACACCCGATGGGCCCCTCCCCTGCCTGCCCCATGGGGCCACACAGCGGGCGGGCATCACCTCTCCCGTTGAGAAGCGAGAAGATCCAGGGGCTGGCACGGGCAGCTCTTTGGCGGCACCTGAGCTTTCAGGTACCCAGGACCCAGGCATGTCTGGCCTCAGTCAGACAGAACTAGAGAAGCAGCGACAGCGCCAGCGACTACGGGAGCTATTAATTCGGCAGCAGATGCAGCGCAACACCCTTCGGCAGGAGAAGGAGACTGCGGCAGCTGCCGGAGCGGTGGGACCCCCAGGCAACTGGGGTGCTGAGCCTAGTAGCCCCGCATTTGAGCAGCTGGGTCGAGGCCAGACCCCCTTTGCTGGGACCCAGGACAAGAGCAGCCTTGTGGGACTGCCCCCAAGCAAGCTGGGTGGCCCCATCCTGGGGCCAGGGGCTTTCCCCAGTGATGACCGACTCTCCCGGCCGCCTCCACCAGCCACCCCTTCCTCTATGGATGTTAACAGCCGGCAATTGGTGGGGGGCTCCCAAGCCTTCTATCAGCGAGCACCGTATCCTGGGTCCCTGCCCTTACAGCAGCAGCAGCAGCAGCAACTGTGGCAGCAGCAGCAACAGGCAACAGCAGCAGCTTCCATGCGACTTACCATGTCTGCGCGCTTTCCATCAACTCCTGGGCCTGAACTTGGCCGCCAAACCCTAGGTTCCCCTTTGGCTGGAATTTCCAACCGCCTGCCTGGCCCTGGTGAACCAGTGCCTGGCCCAGCTGGTCCTGCCCAGTTCATTGAGTTGCGGCACAATGTACAGAAAGGACTCGGACCGGGGGGGCCTCCATTTCCCGGTCAGGGACCTCCACAGAGACCCCGTTTTTACCCTGTAACTGAGGATTCCCACCGACTGGCCCCTGAAGGGCTTCGTGGCCTAGCAGTCTCAGGCCTTCCCCCACAGAAACCTTCAGCCCCACCAGCTCCTGAACTGAACAACAGCCTCCATCCAACGCCCCACACCAAGGGTCCCAACCTGCCCACTGGCTTGGAGCTAGTCAGCCGGCCCCCCTCCAGTACTGAGCTTGGCCGCCCCCCTCCTCTGACCCTGGAAGCTGGAAAACTACCTTGTGAGGACCCTGAGCTGGATGATGACTTTGACGCCCACAAGGCCTTGGAGGACGACGAGGAGCTGGCTCACCTGGGCCTGGGCGTGGATGTGGCCAAGGGAGATGACGAGCTGGGCACTCTGGAGAACCTGGAGACCAATGATCCCCACCTCGATGACCTGCTCAATGGGGATGAGTTTGACTTGCTGGCCTATACTGACCCTGAGCTGGACACGGGGGACAAGAAGGACATCTTCAATGAGCATCTGAGGCTGGTGGAGTCGGCCAATGAAAAGGCTGAACGAGAGGCTCTGTTGCGAGGGGTGGAGCCAGGACCCTTCGGCCCCGAGGAGCGCCCTCCCCCGGCCGCTGATGCCTCTGAGCCCCGTCTGGCGTCAGGGCTTCCCGAGGTGAAGCCCAAGGTGGAGGAGGGTGGGCGCCACCCTTCCCCTTGCCAGTTTACCATTACCACCCCCAAGGCAGAGCTGGCACCTGTCACCACTTCCCTAGGCCTGGGGGTGAAGCCAGGTCAGAGTGTGACGGGCAGCCGGGACACTCGAATGGGCACAGGACCTTTTTCTAGCAGTGGGCACACAGCTGAGAAGGTCCCCTTTGGGACCACAGGAGGACCACCAGCTCACCTGCTGACGCCCAGCCCACTAAGTGGCCCGGGAGGGTCCTCCCTACTGGAAAAGTTTGAGCTAGAGAGTGGGGCCCTGACTTTGCCTGGTGGACATGCATCTGGGGATGAGCTGGACAAGATGGAGAGCTCACTGGTAGCCAGTGAGTTACCCCTGCTCATTGAGGACCTGTTGGAACATGAGAAGAAAGAGCTGCAAAAGAAGCAGCAGCTTTCAGCGCAGCTGCAGCCTGTGCAGCAGCAGCAGCCCCAGCAGCATTCCCTGCTGTCCACCCCAGGCCCTGGCCAGGCTGTGTCTTTGCCCCATGAGGGCTCTTCTCCCAGTTTGGCTGGCCCTCAACAGCAGCTTGCCCTGGGACTTGGAGGCTCCCGACAGCCAGGCTTGGCCCAACCATTGATGCCCAACCAGCCACCAGCTCATGCCCTCCAGCAGCGCCTGGCCCCATCCATGGCCATGGTATCCAACCAAGGGCATATGCTAAGTGGGCAGCATGGGGGACAGGCAGGCTTGGTGCCCCAGCAGAACCCACAGCCGGTGCTGGCACAGAAGCCAATGGGTACCGTGCCACCGTCCATGTGCATGAAACCACAGCAGCTGGCAATGCAGCAGCAGTTGGCTAACAGCTTTTTCCCTGATACAGACCTGGACAAATTTGCTGCAGAAGATATCATTGATCCAATTGCAAAGGCCAAGATGGTGGCTTTGAAAGGCATCAAGAAGGTGATGGCTCAGGGCAGCATTGGAGTGGCACCTGGTATGAACAGGCAGCAAGTGTCCCTGCTAGCTCAGAGGCTCTCAGGGGGGCCCGGCAGTGATCTGCAGAACCATGTGGCAGCTGGGAGTGGCCAGGAGCGGGGTGCCGGTGACTCCTCCCAGCCTCGTCCCAATCCACCCACTTTTGCCCAGGGAGTAATCAATGAGGCTGACCAGCGGCAGTATGAGGAGTGGCTGTTCCATACCCAGCAGCTCCTACAAATGCAACTGAAGGTGCTAGAGGAGCAGATAGGGGTGCACCGCAAGTCCCGGAAAGCCCTGTGTGCCAAGCAGCGCACTGCCAAGAAGGCTGGCCGGGAGTTCCCCGAGGCTGATGCTGAGAAGCTGAAGCTGGTTACAGAACAACAGAGCAAGATCCAGAAACAGCTGGATCAGGTCCGGAAGCAGCAGAAGGAGCACACTAACCTAATGGCAGAATATCGGAATAAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCACTCAGCCGTACTTGCCCTTAGCCCTTCCCAGAGTCCCCGGCTACTCACCAAGCTTCCTGGTCAGCTGCTCCCAGGCCATGGGCTGCAGCCACCTCAAGGACCCCCTGGGGGCCAAGCTGCAGGCCTTCGCCTGACCCCTGGGGGCATGGCCCTACCTGGACAGCCTGGTGGCCCCTTTCTCAACACCACCCTGGCCCAACAGCAGCAACAGCAACATTCTGGAGGAGCTGGGGCCTTGGCTGGCCCCTCAGGGGGCTTTTTCCCTGGCAACCTTGCTCTTCGAGGCCTGGGACCTGACTCGAGGCTTTTACAGGAAAGGCAGCTGCAGCTCCAACAGCAGCGCATGCAGCTGGCCCAGAAACTGCAACAGCAGCAGCAGCAGCATCTCCTAGGACAGGTGGCAATCCAGCAGCAACAGCAGCAGGGCCCGGGAGTACAGGCAAACCAGGCTCTGGGTCCCAAGCCCCAGGGCCTTCTGCCTCCCAGCAGCCACCAGGGCCTCTTGGTCCAGCAGCTGTCCCCGCAACCACCCCCGGGACCCCAGGGCATGCTGGGCCCTGCCCAGGTTGCAGTGTTGCAGCAGCAGCAACCACACCCTGGAGCTTTGGGCCCCCAGGGCCCTCACAGACAGGTGCTCCTGACCCAGCCACGGGTGCTAAGTTCCCCCCAGATGGCACAGCAGGGTCAGGGCCTTATGGGACACCGGCTGGTCACATCCCAGCAGCAGCAGCAGCAACAGCACCAACAGCAAGGATCCATGGCTGGGCTTTCCCATCTTCAACAGGGTCTGATGCCACACAGTGGGCAGCCCAAAGTGGGCGCTCAGCCCATGGCTCAGCTACAACAGCAGCAGCAGCAACAGCAGCTACAACAGCAGCAGCAGCAGCAACAGCAGCTTCAACAGCAACAGCAGCAACAGCAGCTTCAACAACAGCAGCAGCAACAGCAGCTTCAACAACAGCAGCAGCAACAGCAGCTTCAACAACAGCAGCAACAGCAGCTTCAACAACAGCAGCAGCAGCAGCAGCTTCAACAGCAGCAGCAGCAGCTTCAACAGCAGCAGCAGCAGCAGCAGCTTCAACAGCAGCAGCAGATAGGCCTCTTGAGCCAGAGTCGAGCTTTACTGTCTCCTCAACAGCAACAGCAGCAGCAACAGATGACACTTGGCCCTGGCATGCCAGCCAAGCCTCTGCAACACTTTTCTAGCCCCGGAGCCCTGGGCCCAACCCTTATCCTAACGGGCAAGGAACAAAGCATTGTAGAGACAGCTCTTCCTTCAGAGGCCAGTGAGGGGTCCTCCACACATCAGGGAGGGCCCTTACCAATGGGGACTGTACCAGAGTCCGTGGCCCCTGAACCAGGAGAGGTGAAGCCCTCACTGTCTGGGGACTCACAACTCCTTCTTGTCCAGCCCCAGGCCCAGCCTCAGCCCAACTCTCTGCAGCTGCAGCCACCTCTGAGGCTCCCAGGACAACAGCAGCCGCCGGTTAACTTGCTCCACACAGCAGGCGCAGGAAGCCATGGGCAACCAGGCAGTGGATCATCTGAGGCCTCGTCTGTGCCCCACCTACTGGCCCAATCCTCTGTTTCCTTAGGGGAACAGCCTGGATCCGTGACCCAGAACCTTCTGAGCTCCCAACAGCCCCTTGGACTAGAGCGGCCCATGCAAAATAACATAGGGCCACAGCCTGCCAAGCCGGGATCTGTCCCGCAGTCTGGGCAGAGCCTGCCAGGGGCTGGGGTCATGCCTACAGTGGGTCAGCTTCGGGCACAGCTCCAAGGAGTCCTGGCCAAAAACCCACAGCTGCGGCATTTGAGTCCTCAGCAGCAGCAGCAGCTCCATGCACTTCTCATGCAGCGGCAGCTACAGCAGAGTCAGGCAGCACGCCAGGCCCCACCATACCAGGAGCCTGGGACCCAGCCCTCTCCCCTCCAAGGCCTCCTGGGCCGCCAGCCCCAACTTGGGGGCTTCCCTGGATCCCAGACAGGCCCTCTTCAGGAGCTAGGGGCCGGGCTTCGACCTCAGGGCCCACCCCGACTCCCCGCCCCACAAGGAGCCTTATCCACAGGACCAGTTCTTGGCCCTGTCCATCCCACACCTCCACCATCCAGCCCCCAAGAGCCAAAGAGACCTTCCTCCCAATTACCTTCCCCTAGCTCCCAGCTCCCCTCAGAGGCCCAGCTCCCTACCACCCAGCCAGGAACCCCCAAGCCCCAGGGGCCACCCTTGGAGCTTCCTCCTGGGAGGGTCTCACCTGCTGCTGCCCAGCTTGCGGATACCTTCTTTGGCAAGGGACTGGGACCTTGGGACCCCCCAGACCACCTAGCGGAAGCCCAGAAGCTGGAGCAAAGCAGCCTGGTACCTGGGCATCTGGACCAGGTGAATGGGCAGGTGGTACCTGAGCCACCGCATCTCAACATCAAGCAGGAGCCTCGGGAAGAGCCGTGTGCCCTGGGGTCCCAGGCGGTGAAGAGGGAGGCCAACGGGGAGCCTGTGGGGGCACCAGGTACCAGCAACCACCTCCTGCTGGCAGGGCCCCGCTCAGAAGCTGGGCATCTGCTCTTGCAGAAGCTTCTACGAGCAAAGAATGTGCAACTCAGCACTGGGCGGGGGCCTGAGGGGCTGCGAGCTGAGATCAACGGGCACATTGACAGCAAGCTTGCTGGGCTGGAGCAGAAACCACAGGGTACCCCCAGCACCAAGGAGGATACAGCAGCAAGGAAGCCTTTGACACCGAAGCCCAAGCGGGTACAGAAGGCAAGCGACAGGTTGGTGAGCTCCCGAAAGAAGCTGCGGAAGGAGGACGGGGTCAGGGCCAGCGAGGCCTTGCTGAAACAGCTGAAACAGGAGCTGTCCCTGTTGCCCCTCACGGAGCCTACCATCACCGCCAATTTTAGCCTCTTTGCTCCCTTTGGCAGCGGCTGCCCGATCAGTGGGCAGTGCCAGCTGAGGGGGGCCTTTGGAAGTGGGGTGCTGCCCACGGGCCCTGACTACTATTCCCAGCTGCTTACCAAGAATAACCTGAGTAACCCGCCGACACCACCCTCGTCGCTGCCCCCCACCCCACCCCCATCGGTGCAGCAGAAGATGGTTAATGGCGTCACTCCATCCGAAGAGCTGGGGGAGCACCCCAAGGATGCCGCCTGTGCCCGGGATACTGAAGGGGTGCTGAGGGATGCTTCAGAAGTGAAAAGTCTAGACCTGCTGGCCGCTTTGCCTACCCCCCCTCACAATCAGACTGAGGATGTCAGGATGGAGAGTGATGAGGACAGCGATTCTCCTGACAGCATCGTGCCAGCTTCATCCCCTGAGAGCATCCTGGGGGAGGAGGCTCCCCGTTTCCCTCAGCTGGGCTCAGGCCGGTGGGAGCAGGATGACCGGGCTCTCTCCCCCGTCATCCCTATCATTCCTCGGGCCAGCATTCCAGTCTTCCCAGAGAGCAAACCTTATGGAGTCTTGGATCTGGAGACCACCAGGAAGCTGCCTGCCCCAACTTGGGAAAAGGGCAAAGGAAGCGAGGTGTCAGTCATGCTGACGGTTTCTGCTGCTGCCGCCAAGAACCTGAATGGCATGATGGTGGCAGTGGCAGAGCTGCTGAGCATGAAGATCCCCAATTCCTATGAGGTGCTGTTCCCAGAGAGCCCTGCCCGGGCTGGCATCGAGCCTAAGAAGGGGGAGGCTGAGGGCCCTGGTGGGAAAGAAAAGAGTCTGGGAGGCAAGAGCCCAGAGGCTGGCCCTGATTGGCTGAAGCAGTTTGATGCTGTGTTGCCTGGCTATACACTCAAGAGTCAGTTAGACATCTTGAGTCTCCTCAAACAGGAGAGCCCTGCCCCAGAGCCCCCCGCCCAGCACAGCTACACCTACAACGTCTCCAACCTGGATGTGCGACAGCTCTCGGCCCCACCTCCTGAAGAACCCTCCCCACCTCCTTCCCCTCTGGCACCCTCTCCTGCCAGCCCCCCTGCTGAACCCTTGGTTGAACTTCCAGCTGAACCCTCAGCTGAGCCACCCATCCCCTCGCCTCTGCCACTGGCCTCATCCCCTGAATCTACCCGGCCCAAGCCCCGAGCCCGGCCTCCTGAAGAAGGTGAAGATTCCCGGCCCCCTCGCCTCAAGAAGTGGAAGGGGGTGCGCTGGAAGCGGCTCCGGCTGCTGCTGACTATCCAGAAGGGTGGTGTGCGGCAGGAGGATGAGCGGGAAGTGGCTGAGTTCATGGAACAGCTCGGCACAGCCTTGCGACCTGACAAGGTGCCTCGAGACATGCGGCGCTGCTGCTTCTGTCATGAGGAGGGGGATGGGGCCACGGATGGGCCTGCCCGCCTGCTGAACCTGGACTTGGACTTGTGGGTGCATCTCAACTGTGCCCTGTGGTCCACAGAGGTATATGAGACCCAGGGCGGGGCGCTGATGAACGTGGAGGTTGCCCTGCACCGAGGCCTGCTCACCAAGTGCTCCCTGTGCCAGCGCACTGGTGCCACCAGCAGCTGCAATCGAATGCGTTGCCCCAACGTCTACCATTTTGCCTGCGCCATCCGCGCCAAGTGCATGTTCTTCAAGGACAAGACCATGCTATGTCCAATGCATAAGATCAAGGGGCCCTGTGAGCAGGAGCTGAGCTCTTTTGCTGTCTTCCGGAGGGTCTACATTGAGCGGGATGAGGTGAAGCAGATTGCCAGCATCATCCAGCGGGGAGAGCGGCTGCACATGTTCCGGGTGGGGGGCCTTGTGTTCCACGCCATCGGACAGCTGCTGCCCCACCAGATGGCCGACTTCCACAGTGCCACTGCCCTCTATCCAGTGGGCTATGAGGCCACGCGCATCTACTGGAGCCTCCGCACTAACAACCGCCGCTGCTGCTACCGCTGCTCCATCGGCGAGAACAATGGGCGGCCGGAGTTCGTGATCAAAGTCATGGAGCAGGGCCTGGAGGACATGGTCTTCACGGACGCCTCTCCGCAGGCCGTTTGGAATCGCATCATTGAGCCTGTGGCAGCCATGAGGAAAGAGGCCGACATGCTGCGTCTCTTCCCTGAGTACCTGAAAGGCGAGGAGCTCTTTGGGCTGACAGTGCATGCCGTGCTGCGCATAGCTGAATCACTGCCTGGAGTGGAAAGCTGTCAAAATTATTTATTCCGCTATGGACGCCACCCCCTGATGGAGCTACCGCTCATGATCAACCCCACTGGCTGTGCTCGGTCAGAGCCTAAAATCCTCACACACTACAAACGGCCCCACACTCTGAACAGCACCAGCATGTCCAAGGCATATCAGAGCACCTTCACAGGAGAGACCAACACCCCGTACAGCAAGCAGTTTGTGCACTCCAAGTCATCTCAGTACCGGCGGCTGCGCACTGAGTGGAAGAACAATGTCTATCTGGCTCGCTCCCGTATCCAGGGCCTGGGTCTCTATGCAGCCAAGGACCTAGAAAAGCACACAATGGTCATTGAGTACATTGGCACCATCATTCGCAATGAGGTGGCCAACCGGCGGGAGAAAATCTATGAGGAGCAGAATCGAGGCATCTACATGTTTCGAATAAACAATGAACATGTCATTGATGCTACGTTGACCGGAGGCCCCGCCAGGTACATTAACCATTCTTGTGCCCCTAACTGTGTGGCGGAAGTTGTGACATTTGACAAGGAGGACAAAATCATCATCATCTCCAGCCGGCGAATCCCCAAAGGAGAGGAGCTGACATATGACTATCAGTTTGATTTTGAGGACGATCAGCACAAGATCCCCTGCCACTGTGGAGCCTGGAATTGTCGGAAATGGATGAACTAAGAAGCTTTGAGGCTACCAGGCAGGGGAGTCCCCCCACCCCCAACCTCTTCCCTGAAAGGGATGAGGGGGAAGAGAGGTAGCAGCCAGAGCCAGGACCCAGGGCTGGGGCTGCCGGCTGACCGGAGCCCCTGGAGCAGGAGGCTGGGGCAGAGGGCCCTAGGCCAAGCCCACCCTGGGCACCAGGGATGACCCTCTTCCCCGCCACCGGCCCCCAGGCTGGCATCTCTGCCCCCAGCTCCAGGAGGGGCCAGACAGAAGCAGCCATTGGGCATCTCAGGTTTGAGGGGGATATGGGCCGGGAACTACCCAGAAGCATCTGGGAGGCAGCAGGGAGGCGGGAGGAGGATGTGTGGCCGGGCCTCACAGCCCTGCTGCTCCCACCGACCTCTCTGGCCCAACTCAAGGCTGCAAAGAGACTTGACTAAGCTTGACAATCCCAAAGGCCGGGTCCCACACCTGGCCCTGCCTGCCGGGTCCTGCCCCCACCCTCACCCCCATCCCCTTCCCTCTCGATCTGTCTCTGTCTCCCTCTTCTCCTCTGTGTTTCTGTCTCTCTATGGGTTGTGTTTCCTTGTTTTCCACTCTGACAAATGCAACATGAATGGGAAAGAGGCGCCCAGCTGCCCAGGAGGGCAAGCCAGGCAAGCCGGGCAAGGAGACCCCGCACCCACACCTACCTCATTTAAGTGTTGGATTTTTTGCTGTTTTGAAATGTGAGACCCTCTCCAAGCCCCCTACTGCCCCAACCCTCTCCCCCACCTCACTGCCCTCTTCTGAGTGGGTGGAAGGGGGGTAGGAGGAAGAAGAAAAAACAACAACAAAAAATCCATC EMBV3_07769 AGGTCACCATTGAGGGCCCTGAGGGGACCCCGCGGGCGAGCGCGACAAGAAGCTGGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10604 TCAAAATCTGTTTGGAATTTTGCAAAATTCAATAGGCTTCTAGACCAGCTGCCGAGAGCC Gene GeneID:100337111|LOC100337111:XM_002688036:11_cdna Constitutive 0 NULL GeneID:100337111 6 GENE LOC100337111 NULL T-cell activation Rho GTPase-activating protein-like EMBV3_07533 TGGAGTGTGAGATTGCCACATATCGGAACCTTCTGGAAAACGAGGACTGCAAGCTCCCCT Gene GeneID:515000|KRT38:XM_002696020:455_cdna Constitutive 0 NULL GeneID:515000 19 GENE KRT38 NULL keratin 38 EMBV3_13970 CCTCATGCCCTTTCTGACTCTAGTTCCTTGCAGACATTGTTTCTGGCTCGTACTGACTGC Gene GeneID:509936|ADCY6:NM_001143877:56_cdna UTR3_Alt 2 NULL GeneID:509936 5 GENE ADCY6 NULL adenylate cyclase 6 EMBV3_06503 AAGGCTGGATGTCACTTACGCCCTCGGGGCCTGCATTTCTCCATTTACAGATGCTGGATT Gene BVV0102_018164 + 0 NULL GK000013.2:64239965-64258555 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27905 ATCTTCAAAATAACCTCATCGGAAAAATTGGCTGTGAAGGGCTGACAAAGCTTGACTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32441 TTACGAGAAGCTGCTGGGCTCAGATATTTTCACAGGGGAGCCTTCTCTACTCCCAAATGG Gene GeneID:511022|IL23A:XM_002687579:639_cdna Constitutive 1 NULL GeneID:511022 5 GENE IL23A IL-23 interleukin 23, alpha subunit p19 EMBV3_00429 TGGGTAGGAAAGAAAGCATACATGAACGTGACCCTGAGGTGAAGAGGTATATGAGCAGCC Gene GeneID:510844|LOC510844:XR_084605:751_cdna Constitutive 0 NULL GeneID:510844 18 PSEUDO LOC510844 NULL similar to Zinc finger homeobox protein 3 (Zinc finger homeodomain protein 3) (ZFH-3) (Alpha-fetoprotein enhancer-binding protein) (AT motif-binding factor) (AT-binding transcription factor 1) EMBV3_23966 TTTTAACAATCCGCTTGGACACGAACAAGCCACACTTCTAACTGCTTCTGGCGAACTGAT Gene GeneID:511763|SYNCRIP:XM_002690201:60_cdna Constitutive 1 NULL GeneID:511763 9 GENE SYNCRIP NULL synaptotagmin binding, cytoplasmic RNA interacting protein EMBV3_34938 CCCCAACCTACCTGTATTTCTCTTAATGACTTCTGGATTCTGAGCTCCCTGTGCAGTCTG Gene GeneID:504847|CCNI:NM_001083373:41_cdna UTR3_Alt 2 NULL GeneID:504847 6 GENE CCNI MGC138097 cyclin I EMBV3_01527 GATATCTGGTACCTCGCTGGAATTGTGAGCTGGGGAGATGAATGTGGGCAACCCAATAAG Gene GeneID:100335739|LOC100335739:XM_002688318:172_cdna Constitutive 0 NULL GeneID:100335739 6 GENE LOC100335739 NULL Transmembrane protease, serine 11E2-like EMBV3_20273 ACGAGTACTGCAGGAGGAGATGAAAGAGGGGACAGACATGTTCATCATCAAGGCCGTGCT Gene GeneID:527607|EFTUD1:XM_002696606:100_cdna UTR3_Alt 2 NULL GeneID:527607 21 GENE EFTUD1 NULL elongation factor Tu GTP binding domain containing 1 EMBV3_39984 CTAGACGGACCTCTGTTGGCAAAGCAATGTGTCTGCTTTTTAATATGCTATTTAGGTTGG Gene BVT0102_321413 + 1 EMBV3_34949 GK000026.2:43109286-43118087 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227858 TCONS_00227860 TCONS_00235743 TCONS_00227866 TCONS_00081556 TCONS_00186858 TCONS_00227862 TCONS_00232210 TCONS_00016541 TCONS_00016539 TCONS_00007246 TCONS_00220775 TCONS_00016540 TCONS_00206647 TCONS_00227864 TCONS_00227863 TCONS_00207893 TCONS_00251346 11 XLOC_138354 XLOC_144293 XLOC_050435 XLOC_112909 XLOC_141696 XLOC_008835 XLOC_002808 XLOC_134092 XLOC_125168 XLOC_126408 XLOC_154287 Coding TCONS_00016539 XLOC_008835 Coding Coding PNP 10:26663132-26673928 j TSS11496 5475 1 TCONS_00016539_15 189 0.487123287671233 3 0.493098656785549 6.53282008577477e-08 5.51498814097168e-13 3.05954265164515e-08 1.29226859557777e-13 3.02723111505078e-14 8.16491399353686e-07 9.85766124342597e-22 3.88500949755186e-05 2.18972997007341e-06 3.97804143564724e-06 0.000153163378643651 4.56478017970821e-05 6.11057234935998e-05 0.000470101478614512 1.20147375814341e-05 0.000896363579466569 0.00131670851828135 0.000373752880896779 1.00593143066714e-05 9.34053795778591e-07 0 0.0001669737206972 0.000187144328038078 0.000142489843209998 4.64915837667775e-05 2.59170399157432e-05 2.05727020470636e-05 0.000206354372310683 3.48757444401695e-05 0.000488888865714348 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1299 84.24 0.210228310502283 NM_000270.3 PNP Homo sapiens purine nucleoside phosphorylase (PNP), mRNA. 1e-167 596 68.86 0.274155251141553 0 coding 0 0 0 0 -0.201740758397766 0.188319654473249 0.343339021013834 0.00482608954268114 GCTGGGTGGGTAACACTCTGTTACTGGAGCCAGCTCAGCTCAGCGGAGCAGATATAAACCGAGAAGGGCAAACTCATCGAGAGGGCGTCTTCGGGACCATGGCGAATGGATATACATATGAAGATTATCAAGACACTGCAAAATGGCTTTTGTCTCATACCGAACAGCGACCTCAAGTGGCAGTGATCTGTGGTTCTGGGTTAGGAGGTCTGGTTAACAAATTGACTCAAGCCCAGACCTTTGACTACAGTGAAATACCAAACTTTCCAGAAAGTACAGGCATGAGCACAGTACCAGAAGTTATAGTCGCAAGACACTGTGGACTTCGAGTCTTTGGCTTCTCACTCATCACAAACAAGGTCATCATGGATTATGAAAGCCAGGGGAAGGCCAATCATGAGGAAGTACTAGAGGCTGGGAAGCAAGCTGCACAGAAATTAGAGCAGTTTGTCTCCCTTCTTATGGCTAGCATTCCAGTGTCAGGGCACACCGGTTAACCAGCCCCGGAGTGGGTTGGCCTCTCCATTATGGGATCTGGGGAGCTGCTGCCTATTTCAGCCCTTGCTGGAGTCACGTGCCTCTGCCTTAGGTGGCGGCAGAAAGGAGGGTCACCTTCCCTGCTTCTTCCACCAGACCTTACTGGTGCTGAGCCCTCTTCTGGTCATTTTGTCATCTCAAAATGATTTCCACTCCTATTCCTCTTCAAGAACTGGAGCCCCAACCCTAGCACACATCCAAGGATTTAGTTTGGGGCCCTCAAACTCAGCACAGGAACTATTACTGGCTTAAGATGATTCTTTCACATTCCTCGGAGCTCAGTTCTGCCTCCTCAGAGCATGGGCGACCATACAGGGAAGAGCCTATTGCTTTTGGATTTTTATGCTATTGTATTTTGAATAAAGACAAAGATGAAGTAATTTCTTCATTTTTATGTGATTTGGGATAAGGTTGGCATATGGACCGAGAGTGACATGAAACCAATCATAAGACCACATTTTGTTCGACTCTGTGCTTCTCAGACAGCGAAGAACTGAGATGAGGTGGTATGTGAATTCAGGGTAGGATGAAGCAAAGGCAAAGAGGTGAAAGTGAAAGGAAGTGCTAGAAGATAAGGAAAGGCTAACTTCGGGCACATAATGGCTACTTCCCTTGGATCAGTCTTCCTCTGCCCCTTTGCTTTCTGGTAGTTTCTGTCTACTCATGAATATCTGAATTAGTTCACTGACCTCAGCTTGTGTTCCATAGTTGCCACTTCCTTGTTATGCCCTAGTTGTATTTCCTATTGATTTCCTTCAGTTCCCTCACCCGAACACCTGCCATAATTCACAGCAGCCATACACTCCTTCACTCCATTCTCACAGTGCAATGACAAATACCCTTTTCTCTGCTGCCCGCCACGCCACTGCTGATGAGAGTGCTGCCAGCCCTTGTGAGGCTGACTCATACCCTGGCCTCTTCTCTTGGAGCAGCCCTTTTCCTCCTATTGCTTTCTTCCTGGGCATTAGCCTTCTCACTCTGCTTGATCAGAACCTCCCTGTGACGTAAGCCCAGGCATGACTCGTTGGCTCACTGAACTCTGTGTGCTTATTAGCTTGCCTTCAGCTGGCTGGCATGTTTGCCATTTGAGAGAGGGTAGAGCTGGGTCAGCCTCCAATAGTGGTAACATTTCAATTAGTAGTAGTATCATATAGAAGAGAAATTTTGGCAGGAAAGCTTTCCAGAACTCTTATAAATAATCCTTTGTTTGGTAACTGACCTACTTAGCTGAACCGAACACAAAAGCATCCCGGAGGGGCAGTATGACTACTCTTCGTTTCATCCATTCTTCTTTTCATCAAGTTATTGAATATTTGTTTAACACCGTTAACTAAGAGAATGTTAAGTTCAGAATATAAAAATGGTTTTTTCCTCTCAAGGGCCTTACAGTGCCCTACAGAAATTTTGTTCAGTCTCCACGTGGTGTCTGACTCTGGAACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCTCCTGGAGTTTGCTCAAACTCATGTCTGTTGAGTCCGTGATGCCATCCAACCAACTCCTTCTCTGCTGCCCCCTTCTTTTGCCTTCCATCTTTCCCAGCATCAGAGTTTTTTCCAGTGAATCTGCTTTTCACATCAGGTGGCCAAAATATTGGAGCTTCTGCTTCAGTATCAGTCCTTCCAATGAATATTCAGGACTGATTTCCTTTGGGATTGACTGGTTTGATCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTTCAGCAACACAATTGAAAAGCATCAATTCTTTGGTGCTCAGTCTTCCTTATGATCCAACTCTCACATCCTTATGTGACTACTGGGAAAACCGTAGCTTTGACTGGATGAACTTTTGTTTGCAAAGTGATGTCTCTGCTTTTTAATACACTGTCTAGGTTTGTCATAGCTTTCCTTCTAGTGAACAAGTGTCTTTTAATTTCATGACTGCAGTCACTGTCTGCAGTGATTTTGGAGCCCAAGAAAGTAAAATCTGTCACTGCTTCCATCTTCCCTCCTTCTATTTCCCTTGAAGTGATAGGACTGGATGCCATGATCTTGGTTTTTTTAATGTTGAGTTTGAAGCCAGCTTCTTCATTCTCCTCTTTCACCCTCATCAAGAGGCTCTTTAGTTCCTCTTCACTTCCTGCCAGTAGAAATACACATTTGCAAAGCTATTACCTGTCCATATAAGGTGGTATAAAATAGGTACAAGTCACATGTTATGGGAGCCTAACGGACAAACTGATTTTATACACTGGATTGTGAGGATTGGTTACTTAGAGAAAGGTTGTTTAACTTTGAGCTTAGTCTTCAAGGTTGAAAGGGAGGAAAAGGATTTCACATGAGGGTGAGCCAAAGTACAGAGTAATGAAAAGCACTAGGCATGTTCATGGGTCATTGTCACAACAGGTGTGACTAGAACAGAAGACATGGAGACGTAGCAGATGGGCATTTGGAGGTTAGAGGAGGGCTGCATTTTGGTGCTGGGCTTTCATAACCCAGATCTGCAGTGTGGTAGGTCAGGAACTAGAATAGTGCCATCTGAAAAATATGTCCCAGAGAGACTTGGAATATTTAAGGGCATTTCTAGAGTTTTTAAAGGGAATCTAGACTTTGTGTGTGTGTGTGTGGCCACTGTGCAGCATGCAGGATCTTAGTTCCCTAACCAGGGGTGGAATCTATGCCTCCTGCAGTGGAAGTGTGGAGTCTTAACCACTGGACCACCAGGGAAGTCCCTCTAGCCTTTTAGATTTAGAAGGTGTTGTGTATTTCATAATAAAATACTAGGCTAATAAGGAAGGTTATGCACTTGATGTCCTAATTCCAAAGTCTAATTACTTAGATCTAAGTACAAAAAGTAGAACTCACCTACTTTATACAAGTATATATTACTGTATTCATGTTAGGACATTAAATATACTTTCACGGTGACAGAAAATTGTGTATTCTTTATAGTACAAACTAAGCTATGACAAGGAAAGTAGGCACAGGCAAGTAATAGTAATAATTACTAATTCTAAATCCCTAGAATTCTAGGTTCAAGGGGATATAGGTTGGAAATAAACATGAACACAAAGTGTCTTCAATTTAAAAAACAAAAACAGCTTTACTGAGATATAATTCACATATGATAAAAATTCATCCATTTAAAGTGTGTAATTCAATGATTTTTAGTATATATGCGGATATGCACAATCAGCCATCATCAGAGTCCATTTTAGAACACTTTCATCACCTCTAAGGGAAATCTGTACCCTTTAGCTATCATTCTGTACCCTGCCCACCCCTTACCCCATGCTACCCTCCTCAGTTCAGTTCAGTTCAGTCGCTCAGTCGTGTCCAACTCTTTGCAACCCCATGAACCGTAGCACACCAGGCCTCCCTGTCCATCACCAACGCCGGGAGTCGACCCAAACCCATGTCCATCGAGTCGATGATGCCATTCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCCTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGCTCTTCGCATGACGTGGCCAAAGTATTGGAGTTTCAGCCTCAGCATCAGTCCTTCTAATGAACACCCAGGACTGATCTCCTTTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGATTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTTGGCACTCAGCTTTCTTTATAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTTAATATGCTGTATAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGTGTCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCAGAAAAATAAAGTCAGCCACTGTTTCCACGGTTTTCCCATCTATCTGCCATAAAGTGATGGGATTGGATGCCATGATCTTAGTTTTCTGAATGTTGAGTTTTAAGCCAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTCCTTAGTTCCTCTTCCCTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTTCCCCTTTCTGCCATAAGGGTGGTGTCACTGCATATCTGAGATTATTGATATTTCTTCAGGCAATCTTGATTCTAGCTTGTGCTTCCTCCAGCCTCATGAGGAACTGAGAGAAAGGTTCCTCCAACATTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGACATACTCCTTTCCCTATTTGGAAACCGTCTGTTGTTCTATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGATATTCCCATCTCTTTCAGGATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGCTACCCCTGGCTGCTCAAAAGCCAATAGACAGGGCAGGCTGATAGAAAGGATAATTTGCTTTATTTAAGGTGCTGGTGACTGTGGGGTGAGGGTAGTGGACATCTTTTCAAAGGCCTACTCCCCACCTTCCCAACAAGCGGAGGGTAAGAGCTTTTATAGACAGAGTTGGGAGTGGAGAGGGTTACATGCAGAAACAACATAGTCATCTGTAACAGTCATCTTCATCTGGTCCTCAGTGATCTGACCAACATCATCTTTATTGTCACTAAGATTGGTACAGTTAATCTTTAGTTTTAGGGTCCATTTGTTCCCATTTCTTGGCAGTCAATTCTGTGGTAGCTCATGTCCTGGGTACAGTCTGGTCATCATGTGATTAACTTCTTTACCTGTTGTTTTAGTATCTATAAGACAGCTCACAGGATATGGCTCAGAATATTATATAAAGCCCTTGAGAAAGAAATAAAGGTCCTTGACTATGC EMBV3_31075 GGACTTGGACAGCATCTTCCGCAGGATCAGACATCCCAGAGGCATCTCTCCTGGAGGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27143 ATACTTGTTTGCCCTGCAGCTTAAGAGAGACCTTCTGGAGGAACGTCTGACCTGCACGGA Gene BVV0102_182329 + 1 EMBV3_16735 GK000003.2:121021020-121049467 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174939 1 XLOC_104740 Coding TCONS_00174939 XLOC_104740 Coding Coding - 3:121038585-121042881 - TSS129710 290 3 0.933178114086147 0 0 9.57309609577402e-05 0 0.000238346381875457 1.23346729790103e-05 0.000301640362512292 0 2.72074438679314e-05 2.83757858583083e-05 7.89372444582733e-06 0 1.97881581747403e-05 0 0 0.000182148849425631 0 0 0.000197819582644947 0.000123990263493271 2.09360206648918e-05 0 3.16345695693203e-05 0 2.38912511467398e-05 0 0.000202039016387519 0 0 0 XR_230793.1 LOC101904847 PREDICTED: Bos taurus uncharacterized LOC101904847 (LOC101904847), 3e-147 524 100.00 0.996551724137931 XM_005247049.1 FARP2 PREDICTED: Homo sapiens FERM, RhoGEF and pleckstrin domain protein 2 (FARP2), transcript variant X1, mRNA. 1e-57 226 80.00 0.858620689655172 0 coding 0 0 0 0 0.0600360490282753 0.658080833088273 0.0536029156712484 0.267818255645603 AGGACCAAAGAATGCAGTGCTCCGCCTGGCGGTGAAGTTCTTCCCACCGGATCCGGGTCAGCTGCAAGAAGAATATACACGATACTTGTTTGCCCTGCAGCTTAAGAGAGACCTTCTGGAGGAACGTCTGACCTGCACGGACACCACAGCTGCCCTCCTGGCATCCCACCTCCTGCAGGCGGAAGTCGGGGACTACGATGAGGCGCTGGACAGGGAGCACTTGCGTGCCCACGAGTATGTGCCACGGCAGGAGCGTGCCCTGCACAGGATCCTGGCGTTTCACCGCGAGC TCONS_00171645 r 3' 3301 TCONS_00171645 r 3' 3411 EMBV3_03570 GGGCCAGCTCCCAAGTCTGTGTGGTATGCTCTCTTCACCCTCGTATGGCGGATCCAGGGA Gene GeneID:527573|SEMA6B:XM_002688930:118_cdna Constitutive 0 NULL GeneID:527573 7 GENE SEMA6B NULL sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B EMBV3_24374 AATGGTTTGTCAGCACGGGAAAGGACAACCTTCTGAATGCCTGGAGAACACCTTATGGGG Gene GeneID:508893|TLE4:NM_001081583:35_cdna Constitutive 0 NULL GeneID:508893 8 GENE TLE4 MGC155172 transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) EMBV3_05179 GCTGACACAAGTCAACTCCATATTGGCTGGCACCAAGACGTATTCTGTGAATGTCATTAC Gene GeneID:505323|OAT:NM_001034240:24_cdna Constitutive 0 NULL GeneID:505323 26 GENE OAT MGC127648 ornithine aminotransferase EMBV3_04468 GGGTCTTTGAGCTTTTGCCCACCTGCCATTCTGCCTTGTATTGCTTAACTCTTGTCCTGC Gene GeneID:508601|CETN2:NM_001038515:95_cdna Constitutive 0 NULL GeneID:508601 X GENE CETN2 MGC133801 centrin, EF-hand protein, 2 EMBV3_08693 CCCTGGCGTGGTCCCTCCCATGCGGTTTCAATCACATTCTGCCGTATTTCTACGTGATTT Gene GeneID:509348|LBR:NM_001100329:41_cdna Constitutive 0 NULL GeneID:509348 16 GENE LBR NULL lamin B receptor EMBV3_32319 CCCTTAAGTGGGTAGTACTATGACTGAATGAATTTTTGAAGACAGACTGAAGACCTTTTG Gene GeneID:614056|SGOL1:NM_001081617:10_cdna Constitutive 2 NULL GeneID:614056 1 GENE SGOL1 MGC155146 shugoshin-like 1 (S. pombe) EMBV3_10258 GTTCCGTGTAGACATGACTGGCATCAGACTGGGGGTGAAGTCACCATTTCAGTATATGCG Gene GeneID:505144|CHORDC1:NM_001045912:26_cdna UTR3_Alt 3 NULL GeneID:505144 29 GENE CHORDC1 MGC137302 cysteine and histidine-rich domain (CHORD)-containing 1 EMBV3_33760 AGAGGGACCAGGGGAAGGGGGAAGGGAGGCCGAGGAAAGATGGATAAAAGAGACACTTCT Gene BVT0101_063920 + 0 NULL GK000013.2:65203504-65204501 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07046 TGGTCTTCCGTAAAGCCACACAGTACATGCAGCTGGCCTTTGGCCTGGATATGAAAGAGG Gene GeneID:617695|LOC617695:XM_002699654:158_cdna Constitutive 0 NULL GeneID:617695 X GENE LOC617695 NULL similar to melanoma antigen family A, 10 EMBV3_42759 TGGAGACTGAAGAAGGATGCTCCACTGCTGGCTTGAGGAATGCAGCTTTAGAGGCTGGAA Gene BVT0102_018765 + 0 NULL GK000013.2:48594115-48617011 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042885 TCONS_00042884 TCONS_00042886 TCONS_00042888 1 XLOC_025790 NonCoding TCONS_00042884 XLOC_025790 NonCoding NonCoding - 13:48594496-48614628 - TSS31835 643 1 TCONS_00042884_3 105 3 0.968208236053847 0.00171424231530903 5.74141041474874e-05 7.3462417556207e-75 0.000298168847243098 1.47067183185218e-05 3.12730483877707e-05 7.52853615870811e-299 4.15628388679042e-14 0.000210220736267376 0.000166143600081848 5.34025076485701e-05 0 8.92468041196206e-06 2.31665117742841e-56 0 0 1.29100327722314e-05 0 6.65900597849781e-05 0.000150906813625924 3.48659082610121e-129 0 0 0 1.20375237932626e-86 1.98712374794049e-76 0.000268305355093237 0 0 0 0 noncoding 0 0 0 0 -0.176199243657857 0.269971863280276 0.0666661200073892 0.300032404059237 GGTTTGCCTCTGATCTGGTTTGTAGGTCACACTTGAAGTTCTGGGATCTCTTTAACGGGAGGGCTCAGGGTTGCCTTCAGGGAAGAAAGGAGGCTCCAGACAGTTGTAGGGCTTGGGAACCTGGAGTCAAGCATTCTCTCATCCCACGTTGGTCCCAAGAAAAACTCCTGAAGTCAGCCCTGCCAGCAAGGGATGGCCGAGAGCTGCTCAGTGTGGAGTTTCTGGAGTAATCAGGATTACACAGGCAGCTGGGAGATCAAATTGGGAAGATGGAGGCAGAGAGAGATTTTGCTGTGAAGAAGAAGGCAAAGTGGAGACTGAAGAAGGATGCTCCACTGCTGGCTTGAGGAATGCAGCTTTAGAGGCTGGAAAAGGTATCTGAGCCCCTTTGTAAGCCCCTCCATCAGACCTCCATCCCTGAGCCTCACCCGTTCCTGGAAGACCTCACTATTTCAGCACTGGCTTTCCCACTCTCCACTATGTTGCCTGAAAGAACGTCCTTGTTCTCTTGCAATAGTCACAGTGGGCACAAGTCAGGGCTTCCTTTACAAGGCAGGTGCTGGGCCCAAACCAGCCACTCTACCACCAACCCGTATGTGTGGGGCCTGGGCCCCCAGGCCCTGTTGCATTCCCCATCCCTTCT TCONS_00045362 TCONS_00045363 TCONS_00045364 r 3' 264 TCONS_00045362 TCONS_00045363 TCONS_00045364 r 3' 529 EMBV3_17494 CTTACCCTGCCCGGCGCTGGCGGAAAAAGCGGCAAGGGGAAGTCCAAGAGTAAAGGTGTG Variant GeneID:513235|DPF2:NM_001100356:610_cdna 301^593 1 EMBV3_18148 GeneID:513235 29 GENE DPF2 NULL D4, zinc and double PHD fingers family 2 EMBV3_40647 GGGCAGGAGGAGGTGAGAAGACCAGGTCAAAGCTGTTCCCTTCTATGGTTCTTTAACTGA Gene GeneID:538667|DIRAS2:XM_002689844:21_cdna Constitutive 1 NULL GeneID:538667 8 GENE DIRAS2 NULL DIRAS family, GTP-binding RAS-like 2 EMBV3_09046 CGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCATCAGAAACACTGCC Gene GeneID:538844|LRRC7:XM_002686318:83_cdna Constitutive 0 NULL GeneID:538844 3 GENE LRRC7 NULL leucine rich repeat containing 7 EMBV3_39098 TGCAGGAGTTTGTGCAGTTAATGGTCTGTTATACGTAGTTGGAGGGGATGATGGTTCCTG Gene GeneID:533936|KLHL2:NM_001102160:22_cdna UTR3_Alt 3 NULL GeneID:533936 17 GENE KLHL2 MGC155024 kelch-like 2, Mayven (Drosophila) EMBV3_21641 TTACAGATTTCTGACTCTTTCTCCATCATGACCTTTTATTCCACAAGTTTCTGAACTGTG Gene BVV0101_045027 + 0 NULL GK000006.2:73438134-73448404 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205569 TCONS_00205571 TCONS_00205575 TCONS_00205573 TCONS_00205570 TCONS_00205576 TCONS_00205572 TCONS_00205568 TCONS_00205574 1 XLOC_124676 Coding TCONS_00205573 XLOC_124676 Coding Coding PPAT 6:73446021-73487539 j TSS153474 3296 1 TCONS_00205573_2 143 0.00970873786407767 4 0.920707180191247 3.37157025340092e-204 2.22553083460728e-288 2.22127535646123e-116 0 0 0 3.41473221824904e-07 4.64322687371084e-184 5.66632146725309e-239 3.06586406196269e-64 2.42025178854257e-52 1.93548036410183e-37 2.43395366955538e-234 6.9746908144478e-291 2.16176686037131e-05 0.00363324556811859 0.00247418516903799 0.000907048474945223 1.40504380871186e-45 0 0 0.00217150742677165 0.00087342998650056 0.00140798231848224 2.6070519132405e-264 1.26654882483274e-12 0 0.000115365655018664 7.31944811135677e-05 0.000411991459473711 XM_005207956.1 PPAT PREDICTED: Bos taurus phosphoribosyl pyrophosphate amidotransferase (PPAT), transcript variant X2, mRNA. 0.0 3158 100.00 0.530946601941748 NM_002703.4 PPAT Homo sapiens phosphoribosyl pyrophosphate amidotransferase (PPAT), 0.0 664 88.65 0.157160194174757 TCONS_00205573_2 sp|Q06203|PUR1_HUMAN PUR1_HUMAN Amidophosphoribosyltransferase; 4e-89 273 96.27 0.93006993006993 3 noncoding AGCGAGGGTCGAGCCGCTGCGAAGGAAGCTGCTGTACCCGGCCGGAGCTTCGGAGGCTTGCAGGCCGAACAGTCTACTGGTTGGTGCTTAGACCCCTGCAGCGGCGGCGGGTCCCACCACGTGCTTCCGGCGGCGACATGGAGCTGGAGGAGTTAGGGATCCGAGAGGAATGTGGCGTGTTCGGGTGCATCGCCTCAGGAGAGTGGCCCACGCAGCTAGACGTGCCACATGTGGTCACTCTGGGACTCGTGGGGCTGCAGCACCGGGGTCAGGAGAGTGCTGGTATCGTGACCAGTGATGGCAATTCCGTACCCACATTCAAAACACACAAGGGAATGGGTCTTGTAAATCACGTATTTACTGAAGACAATTTGAAGAAATTATATACTTCAAATCTTGGAATTGGACACACAAGGTATGCCACAACAGGAAACTGTGAATTAGAAAATTGCCAGCCCTTTGTTGTTGAAACACTTCATGGAAAAATAGCTGTGGCACATAATGGCGAATTAGTTAATGCTGCGCGCTTAAGGAAAAAGGAGCAAACAGTGTTGTGTATCTGTCAGTAGAAGGGCTGGTTTCATCTGTACAAGAAGGAACATTGAAAAAACAGAGAGTGAAAAAGCAAGACATTGCGGTTCAAGAAAATGGGAATGGTCTGCAGTGCTTTGAAAACAATGGTCATTGTACAAAGGAAGATATTATGATTCAAGAAAATGAGAATGGTCTGCAATGTTTTGAAAAGAATAATCATTGTACAGCTTGTCTGACTGGAAAATACCCTGTGGAATTGGAATGGTAGCTGCCAGAGGCAGACATGATATTTCAGGACACAAAAGTTGGTGAAGAAGCTGTAGTGGTTATACCTTCATTTACTGTTACTCAGTTGGTACAATAAATGCTTGTGCTGTAAGTTTTGAGATTTTTTTTTCTGAAAAGGATACCAAATTGCTATGATTTATTCAGTAATCCTGGATAAATACTTCGGTATTATGTAGGAACTTGGGTGATCCTTTCAGTTTTATTCAGTACTGTTATTTTTTAGAGGTCATGTACATTTCAGATCATCAGCAGTAATGCAGCAGATAGGTGAATTTCTGTTTTAGAGAGGATTGCCAGGTATTGTACTCTCACAGGTTCTTAGGAAATTTTGTGGAATGTTTAAGAGTTATTGAAATTCATTTATGGAATATTTTCATAATTGAACATTGCTAATTGCATTTCATACAACAATATGTGTTTTGTTTGGTTTTTTTCTCTCAAGCATTAGTTAGCTTGGTTAGAGAAGACAAGTGGTTAAGTGTCATTTGCCAGGTCCATGCTTTAAAGAGTTTGCAAGAGGTTAGACTAGGGTGTTGTGATGCAAACAGGACATGTGAGTTCATTGTTCATTATATATCATATGATTCAATACATCAGATTCAATTAAACTTGAATCCATTATACCCCAAAGTTATCTATCATCTACAGTTCTCTTAAAAAAGAAAAAAAAAAAAAACGTTTTGTGCCTCACTTTCCTCACCTGTGCGATGAGGTGTTTATATTATTAAATTCAATAACTAGCAGTTATTTTGGTGGTTAGAGCCATCATTCCACCTCCCAATGTTAAGACAGTGAATTAGCTTTTGAAATGTTGGCTGTTGGTCTGCAGTCAAGATTTCAAAAGGGGGACACAGTTTGCCACCTAGCTCTGAAATGCCCTGATTGTAAAAAGATGTCTGTGCAAAAAATTTTCTTACATTTGACTAGAAAGTGTTAATATGATCCATACTACTTAGTGCCCTTATGGTAGAAGCACAGAAAGTAACCTAGTACATTTGAAGTAAAAGATACATTTTTTTAGATTCTAACAAATGTTTTATCCTTCATTGGATTATATGTCCTTTAATGAAGTGCTTGATCAGTTTCAAACATGTGTATGCAATGAGATGATCAAGTAGAAACACTGTAGGGGCCAATTTTAAGGAATAAGGAGACAACAGCCTTTTCCAGTCAGTGTACTCATCTAATTCCAAGCATCGACTCATTAATTTACCACTTATTCTACTTTACTGAGATCTAATGAATTAGACTTTTTTAAGGTTTTGTTTTTTTTAACTGTTTGTTAACATCTGAGGCGACTTGCCCAAAGCCCTTGCTTATGTAAGCTTTTTAAAACAAAAGTGTTTTTTAGGTGCATTACCTTGATGTGGGACACGACTGAGCGACTGAACTGACTGAACTGAACTGACCTTGATGTGGTGTACATAGTGTCCAAATCCACCTAGAATTATAATATTTATTAATAACCATAGTCTTTTTCTCTTCATTCCGTATTTAGTTTCATATGTTGTGTCATGGCAGGCAAGAGAAACCGTTGGCAGCTCTTTAAGCCCATATGTGGCAGGCAGCAGTGGCCACATAACCCTGCGCTGGGGACACAAGCAAACTGGCATTTGAATAACACCCTGGGCCCATTTGTGTATGTAGCCTCTGGTCTTAAAGGTATTTTTAGTGGCACCATGGAGGAGGCGAGACCTTTGGGTCGCTTTTGAACTAGCCTTACTTACATTTTTTACATTTGATTTTTTTAAATAAAACAAGAGACTCAGGGAAAGTACTAAACCAAAATCTCTGGTTTGACTTTTGTGTTTTCCATAGTTTTTGGTTTTATTGAGATGTTTTTAGAAAAGAAAATGGTACTGTGACACTTTAGTAATTTTACAGATTTCTGACTCTTTCTCCACCATGACCTTTTATTTCACAAGTTTCTGAACTGTGAATTACAGTTTTATATCAGTGTAATCTCAAATGTTGTTTAGCTGCTTTAAATTTATATAGGTATGGTAAGCTGCAGAGAAAATGAGAAATATGTTTTCACAGAATCTATATTGTAGACTAAACTAAGCCTACTTTTTGTGAATTCCTTGTGATGCATTGGTGACAAATACATGTAATGAGTACATTTAAATGTGTGTGTACTTTTTCTAAATAAAGATTTTTAGGTAGTATATCATGGTGAACAGCATAGTGACAGTCATACTCAGGATCCATTCTTGGCATCACCTAGTTATATCTTACTTCGCTGATTCAGGCATTTCAATAATAGGACATCTCTTATGAACCAGGCAAACTGCTGATGGAGTAGAAGGGATGAATAAAATAGTTAGAAATGCAGTGCTAAGTAAGCACTAAGATAGTGGCCAAGTTCTGGGGAACACTAGCCAGAATAGGGAAGGTGTCACAGAAGAGGAGGCTTAGATTTTCAAACTGTGTGTTGTTGGAATGGAGTATTCTTTAAAATAAAAATAAAGTAG EMBV3_27302 ATCACCACGTCCACGGCGCTGGCCATCATCAACAGCCTGTGGTTCGGCTATGATGCCAAA Gene GeneID:615582|GGT1:XM_002694673:228_cdna Constitutive 0 NULL GeneID:615582 17 GENE GGT1 NULL gamma-glutamyltransferase 1 EMBV3_13125 AATTCAAGCTGATGGAAGAGATCTTAACAGTCTCTGTTTCAATTGCCTGAATTCCGAAGA Variant GeneID:508902|USP28:XM_002692994:165_cdna 403^562 3 EMBV3_00381 GeneID:508902 15 GENE USP28 NULL ubiquitin specific peptidase 28 EMBV3_42842 AAAGATATCAGGCCTACTGGTGAGGTCACTGCCACTTCTGATGTGCTGCTGAAGGGAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04990 TCCGAGACATGGCTGAGAAGTGCGAGGTTCCCCTGATGGTGTACAACTCGGCTTTCATAT Gene GeneID:516442|PTCHD3:XM_002698176:680_cdna Constitutive 0 NULL GeneID:516442 25 GENE PTCHD3 NULL patched domain containing 3 EMBV3_13909 AGATGAAGTCTGGCTGGAGATATTCTTCACTGACCAGAATGGGCTCTTCTCAGACCCAGG Gene GeneID:540131|C1QTNF7:NM_001076201:16_cdna Constitutive 0 NULL GeneID:540131 6 GENE C1QTNF7 MGC142642 C1q and tumor necrosis factor related protein 7 EMBV3_16922 CTACAAGGAGCGCTACCTCTTTCTGTTCAGAGGTCAAGGAATTTGCCATTGTTGCCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02283 GGGGTGGAAGGAGCGGCCTTCTGTCTTTCTGTGAAATGTATTAACGAGTTCGTCTTAGTG Gene BVV0101_021181 + 0 NULL GK000023.2:12971107-13056692 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30944 ACTCCGGGAACCCGTCGAGTAACATGACTAAAAAGAAGCGGGAGAATCTGGGCGTTGCTT Gene GeneID:507353|C23H6orf129:NM_001080236:17_cdna Constitutive 1 NULL GeneID:507353 23 GENE C23H6orf129 C6orf129 MGC148715 transmembrane and coiled-coil domain-containing protein C6orf129 homolog EMBV3_26784 GACTTTTGGGGAAAGATGTGGTTAGAAAAAGCACAGGTGTCGGGCTTCCCTGCTGGTCCA Gene BVV0102_071120 - 1 EMBV3_12516 GK000021.2:21965414-22014264 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09786 CTGTAGAATCTAAGTGGTGGGTATACAGGTGTCCACTGTAAATTCTTTCAATTTAGTTGT Gene BVT0102_342779 - 1 EMBV3_21721 GK000013.2:52771864-52780802 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20604 CCCTGTCTTCCATGGTCCTCATCCCTGGATACATGGCCTACATGTTCCTCACCTTAAAGG Gene GeneID:407118|SLC6A1:NM_001077836:74_cdna UTR3_Alt 2 NULL GeneID:407118 22 GENE SLC6A1 NULL solute carrier family 6 (neurotransmitter transporter, GABA), member 1 EMBV3_43064 ATTTTCTTTCCTGGGGAGCTGAGTCATTCACTTCTGGTCAGCACTACTGGGAGGTGGATG Gene GeneID:616911|TRIM49:XM_002699019:77_cdna Constitutive 0 NULL GeneID:616911 29 GENE TRIM49 NULL tripartite motif-containing 49 EMBV3_11514 GCTGGAATCTGTCTTCTTATCATCATTCAGGGATTCCGTGTGGACCTGCCCATCAAGTCA Variant GeneID:614128|SEC61A2:NM_001046524:11_cdna 571^885 2 EMBV3_05332 GeneID:614128 13 GENE SEC61A2 MGC137488 Sec61 alpha 2 subunit (S. cerevisiae) EMBV3_35169 CAAGAAGCTGACTGCCAGGTCACTTAGTTGCTGTAAACACAGAGCGTCCCAGCTGCGCAG Gene BVV0102_367414 + 0 NULL GK000024.2:49892618-49908123 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143183 1 XLOC_087605 NonCoding TCONS_00143183 XLOC_087605 NonCoding NonCoding - 24:49895851-49896506 - TSS107394 655 3 TCONS_00143183_3 62 0.306870229007634 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000766140735960352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005201591.1 YEATS2 PREDICTED: Bos taurus YEATS domain containing 2 (YEATS2), 3e-56 223 86.08 0.293129770992366 0 noncoding 0 0 0 0 0.015132659872007 0.888828922154115 0.0171595524107635 0.741155586293595 GAAAAGTAGAGACTTAGCTCAGCTCAGGTGAGGGGGTTTGACCAGGGCGCTGGGAGAGCTCTGGGTGTGGCCTCGGTAGCCATGCTGTCATCAGCCCAGCGGTGACCCAGCACCTCCTGCTTTCTCTTTTCCTTCTTGGCTTCCAGAGTCATAACCTGCCCCTGGAAATGGTGCACGGCCCTGCTCTCCAGAGCAAGAAGCTGACTGCCAGGTCACTTAGTTGCTGTAAACACAGAGCGTCCCAGCTGCGCAGGGTCCACACCCTGCCACCCCGAGGGCCAGTGGCAGGCTCACAAAATGGCTGCTTGGACTGTGGCACCAATTTCTGATGGCTCAGTTGGCACAGAATCCACCTGCAATGCAGGAGACCCTGGTTTGATTCCTGGGTCGGGAAGATCCCCTGGAGAAGGGATAGGCTGCCCATTCCAGTATTCTGGCCTGGAGAATCCCATGTACTCTGTATAGTCCATGGGGTGGCAAAGAGTTGGACATGCTGAGCGACTTTCACTTTCACTTTCACTTTCTTTCAGCCATTTAGAAAGCTTGAAGGGGCTCAGCACCACCGTATCCTTCATAACTCACTCTGTCCTCACTCAGCCATTGTCTTTCCAGAAGGAGGTCTCGTTTCCTCCATGGAGGGTGGGCCCAGGCCCAC TCONS_00140496 TCONS_00140497 TCONS_00140498 TCONS_00140499 TCONS_00140500 TCONS_00140501 . 3' 11618 TCONS_00140496 TCONS_00140497 TCONS_00140498 TCONS_00140499 TCONS_00140500 TCONS_00140501 . 3' 12272 EMBV3_36531 CTGTGTTGGCATGTGGAGTTCCCCTTGAGTCTTCGTGATACAGAGGCTGGTGGGTGAAAA Gene GeneID:505048|PRR5L:NM_001015519:24_cdna Constitutive 1 NULL GeneID:505048 15 GENE PRR5L FLJ14213 PROTOR2 proline rich 5 like EMBV3_00196 AAATTGCGAGAAGTAATGGAGAGTGCAGTGGGAAACTCCTCAGGGTCTGGGCAGAGCGAA Gene GeneID:537745|FBXO28:NM_001046425:80_cdna Constitutive 0 NULL GeneID:537745 16 GENE FBXO28 MGC134613 F-box protein 28 EMBV3_24803 AAATACCACTTCCCCCTCTAGTTTCTAGTTTGACAGGAGGGGATGCCTAACAGAATCCTG Gene BVT0101_065492 + 1 EMBV3_07313 GK000027.2:19067493-19077024 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156116 TCONS_00156120 TCONS_00156119 TCONS_00156117 TCONS_00156115 TCONS_00156118 1 XLOC_094918 Coding TCONS_00156119 XLOC_094918 Coding Coding ZDHHC2 27:19072030-19111671 = TSS116673 3069 1 TCONS_00156119_4 344 13 0.922906155398587 0.000273512193290182 0.000845490707084508 0.000901287814911548 0.000436196280058752 0.000569685172750874 0.000178060056138208 0.000189565484897983 0.000201602720396795 0.000448498303624882 0.000125989864853239 4.17384826437999e-05 3.64354921235901e-20 3.72848469366061e-05 0.000867849698937306 5.82060091899286e-10 0.000336092265428095 1.61767862670759e-07 6.11355700431184e-10 0.000338660594992987 0.000760173700686233 3.2519828555669e-09 4.98538765665535e-13 0.00117470891624549 0.0012235768353368 0.000684266830040096 5.47979562038231e-08 0.000291503695868131 0.000141668349041142 8.61465820567773e-05 4.10341663136324e-07 XM_616436.7 ZDHHC2 PREDICTED: Bos taurus zinc finger, DHHC-type containing 2 (ZDHHC2), 0.0 5427 100.00 0.980123818833496 NM_016353.4 ZDHHC2 Homo sapiens zinc finger, DHHC-type containing 2 (ZDHHC2), mRNA. 0.0 2852 80.76 0.980123818833496 TCONS_00156119_4 sp|P59267|ZDHC2_MOUSE ZDHC2_MOUSE Palmitoyltransferase ZDHHC2; 0.0 654 94.46 0.941860465116279 1 noncoding 1 1 1 1 -0.0267052847838168 0.852858733441309 0.000248289012457437 0.996593367197973 ATGGAGCGGGGCTTCGCCTGTCTTCATCTGGAGTCTTTGCTCTTTAGTTCTGTTATGCTTGTGTCCATGGAAAACATTGGAGAACAAGTTGTGTGCCTGATTGCTTATCATCTACTTTTTGCAATGTTTGTCTGGTCGTATTGGAAAACTATCTTTACATTACCAATGAATCCTTCGAAAGAATTCCATCTCTCTTATGCAGAGAAAGAATTGCTGGAGAGAGAGCCTAGAGGAGAAGCCCATCAGGAAGTCCTTCGGCGAGCAGCCAAAGACCTCCCCATCTACACGAGGACCATGTCCGGAGCAATCCGCTATTGTGACAGATGCCAACTTATAAAACCAGATCGCTGCCACCACTGTTCCGTCTGTGATAAATGTATTTTGAAGATGGATCATCATTGCCCATGGGTGAACAATTGTGTTGGATTTTCAAATTATAAATTTTTCCTCCTTTTCTTGGCTTATTCTCTGCTGTACTGCGTTTTTATTGCTGCTACAGACTTACAGTATTTTATCAAATTTTGGACCAATGGCCTACCTGATACTCAAGCCAAGTTCCATATTATGTTTTTATTCTTTGCTGCAGCTATGTTTTCTGTCAGCTTGTCTTCTCTGTTTGGCTATCATTGTTGGCTAGTCAGCAAAAATAAATCTACATTAGAGGCATTTAGAAGCCCAGTATTTCGACATGGAACAGATAAGAATGGATTCAGCTTGGGTTTCGGTAAAAATATGCTCCAGGTTTTTGGTGATGAGAAGAGGTACTGGTTGCTACCCATTTTTTCAAGTCTAGGTGATGGCTGCTCCTTTCCAACTTGCCTTGTTAACCAGGATCCTGAGCAACCATCTACTCCTGCAGGATTGAATTCATCATCTAAAAATCCTGAAAACCATCAGTTTCCTGCAAAGCCACTGAGAGAGTCCCAGAGCCACCTTCTTACTGATTCTCAATCTTGGACGGAGAACAGCACAAGCCTAGGGAAAGGCAAAGCTGGTATGAGCAATCCTGCACTGACCATGGAGAATGAGACTTAACTCTTCTAACAAAATGTACTCATACTTCATGAAAGTAATGAATGCTGTCGATGGATAGAAGAGGCTTCCCCCAGGAAGGCACCTCTAGCCAGCTGTTCCCATCCCCTTTGGCTGGGTGTGCAGAATGTGAATTGAGTAGTTCTCTCAGCATTTGCTTTTAAAACATAACACATTTTTACTCCAGTATACAGATTGTTTCAACTAACACAAATTCTTCTTAAATATTAAAAGTAGTTATGGTTTATGAATCAAGGACAAAGATACCTATCATAAAAACTTGGAATAAATTCATGGGCCAGTTTTCACCCAGCTATTTGGGTAGCACAATGTATCACATAAGAAGCCCATTGATCCTCTGATTTTCTGATTCAGAAAATTTGAGACTATTAAGATACTGAGATTAAAAGATGTCACATCGCATTATAATGATAAGCTTTATTCATAAAACCTGTTAGTTACCTACGAGAGTGTGGAGGTAGCAGATGAGACTTGTTTACTCTCTCCGATAAGAATCCAGCCTCAGACTGTGTGAACTATAAAAACTATGAATTCATTACAAATTTCAAGTGGCCTGAAGTTGAAGATGACCATCCTTTTTTTTTTCTTGCTAGACTTTATTTCTAGCCTTTTTTGCCTGCTGGAAAAGAAGTATGATAATTGAAGCTTGAGCTCAACTGGCTAGAAAATCTTTGTCAGATTTAATACATTTCTATTACATCAGCAATATATTTTTCATCTCTTTTAATTATCTGAAAATGGGTGAAACTCTGTAATAACAATTATGAAGATTGGTTTATGATACTCTTTTTGGGGTTTGGCTTTTAAGTCTCTTTTTAGGTTATTTCTTCTATTGAACATAGCAGACATAATGATTTTTTGTTAAGAATTCTGATGGGGCAATAGATTAATCCTCCATTGATATCTTTATTATTTCTTTGTCCTCTCATCAGAAGTATGACAGTTAAACTACGTAAATACCTATTAAGATTAAATTATGCAAATCATCAAGCAAAAATCATATACTTTTGGTAATTTAGTTCAATATGAACTAAATGGTATGCTGTTTGGAAACTGAGTTTAAGAGAAACTAAAGTGGTGTGTTTGTTGATGCCAAAATGTTCAGCTTCAGTAAATATACTAAGAAGCTCTTGTGCCTTGTATGCACTGTTTAAGTCTTATTTTATTCTTTTTTAATTTGGTGAAGTGCAAGTTTTGTAAATGTTAGCAATTAGATTACGCTGTATACATTTTTTGGTACTGATTTTGAGGATTTAAAGCAGATTACCTTTTAAGACTACACAGCTAAGGAACTGGTATTTAATCAAAGAGACAGTGGTATTAACTTTTCAAAATCTGAATTAGACAAATTCAGCACAAAGTAGACTGGAAGACAAGAAGATAATGGAGTAACATATCCTTGGAATTCACTCATCCTTGCTAGAAGTATGATGTTTTATATTCAGTGACTTTATGAAAGAACCAGTCCATTTTATAAATCATTTGAGTGCAGTTCTTTGAGCAATAGGATGGTGGTCTTTTTCAGATTTTCTTTAAAGTGAAAGATTTTGATGACAATCTACTTAAAGAAAACTCAGAAGATATGATGCATTCTTACTTTTATCTTAAAGCATTTGGTCATCATTTTCCATTACCTGAAGTGCCAGAAGTCTTAAGGGCAAGAGCATCATATAATGTATCAAGAATTATATGCAGCCAGATTTTTTTCAAAGCACAGTACTAGAGCTGTTTTTATAGACAGGATTCTGTTAGGCATCCCCTCCTGTCAAACTAGAAACTAGAGGGGGAAGTGGTATTTTAATTCTTTACCTTGCTAGAGTACTTTTAATCCCCGCTTTAGCTTTTTCATGTAATTATTGAAATACATAAGTCAATACACATTAGAATCAGATATGGAAACATTTTTTAAAATAAAGTCTTTCTCATTAAGTTGTAAAGTTTCCCTTTTTGGTTTCATACATTGACTAATTTTTAAAGGGTTTTTTGTTTTTAATTCTGTGGGATTATAATTTTTGG EMBV3_18011 TTGGACTGGAGCCAAAACAACAATGGCAGACACCCTGATTTAAGGCAGAACCTGGAGGCC Gene GeneID:540062|PRSS37:NM_001040569:709_cdna Constitutive 0 NULL GeneID:540062 4 GENE PRSS37 MGC133809 TRYX2 protease, serine, 37 EMBV3_37895 CTTCAGGCACCAAGGAGAGAAGTCTGGTCATTTGGAGGCAGGAGGAGACCCCCTTTTCTG Gene GeneID:506908|CLIP2:XM_002698183:700_cdna Constitutive 0 NULL GeneID:506908 25 GENE CLIP2 NULL CAP-GLY domain containing linker protein 2 EMBV3_01553 CTGCCATCTTGCTAATCAGTTTCACTTGCCCTGTGGATGGTGCATGGTTCTGTCCTTTCC Gene GeneID:532797|IMPAD1:NM_001046335:38_cdna UTR3_Alt 2 NULL GeneID:532797 14 GENE IMPAD1 MGC129108 inositol monophosphatase domain containing 1 EMBV3_20440 TGTGACGGAAAGAATCAGAAGGGGGCCCAGACCCAGGCAGAGGAGGAAATGACTAGATAT Gene GeneID:534482|FSTL1:NM_001017950:74_cdna UTR3_Alt 2 NULL GeneID:534482 1 GENE FSTL1 MGC137830 follistatin-like 1 EMBV3_21135 CCACCTCCTTCATCACAATAGTCAGTTTCCACTCTGCCCCATGCACAGTGAAATAAGGCC Gene BVV0102_207001 + 0 NULL GK000005.2:30922514-30931916 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38578 TGATTCAAACCAACAGAAGGACAAAGGTCTGGGTCGTGTGGGTTTGGGGGAGATGGGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24472 ATGCGTGCTATGAGGGGCACAAGGAGTCAGGCAGTAGATGTCTTGTCAGGAAAGAAGCCA Gene GeneID:100337074|LOC100337074:XM_002697631:173_cdna Constitutive 0 NULL GeneID:100337074 23 GENE LOC100337074 NULL Leukocyte elastase inhibitor-like EMBV3_15402 GACTTATAACCAGTGTATAGACAAACATTACTCCTCAAATTCTGGAAGAGAGAAGGCCAC Gene BVT0102_371942 - 0 NULL GK000026.2:17891792-18087602 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11979 AAAAAGTGGCAGAACAGCATCCGCCACAACCTCACACTCAACGACTGCTTCCTCAAGATC Gene GeneID:616734|FOXE1:XM_002689724:67_cdna Constitutive 0 NULL GeneID:616734 8 GENE FOXE1 TTF-2 forkhead box E1 (thyroid transcription factor 2) EMBV3_28852 TAACTCTGGTAACTACTTCCTTGGTATTGGTGGCCCTGATAGAGGGAACGAAACCCCTGG Gene GeneID:509093|TBC1D12:XM_002698390:283_cdna UTR3_Alt 2 NULL GeneID:509093 26 GENE TBC1D12 NULL TBC1 domain family, member 12 EMBV3_28785 ATCGGCAGTGACCTCTCCAGGGGATTCTGGCAGCAGAGCCTAAATAAGCACCCTCATTTT Gene GeneID:787892|PLEKHG4:XM_002694899:956_cdna Constitutive 0 NULL GeneID:787892 18 GENE PLEKHG4 NULL pleckstrin homology domain containing, family G (with RhoGef domain) member 4 EMBV3_40790 GGTACATCCATTCAAATTGCTTCCCACTGACGTGGAACTCCTTCCCTGGACGTCAAACAC Gene GeneID:531676|KDELR2:NM_001079779:245_cdna Constitutive 0 NULL GeneID:531676 25 GENE KDELR2 NULL KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 EMBV3_33567 CAAGTGCAAAGTCCAGGTCAACTTGGTGTACGGTCTGGTAGACGGGCTGGTCACCTTCTA Gene GeneID:521257|HRH2:XM_002690411:86_cdna Constitutive 0 NULL GeneID:521257 10 GENE HRH2 NULL histamine receptor H2 EMBV3_07379 GGTAGTGATTATGACAAGAAATATATCCAGGACACCATTGCAGTGGCTGGATTTGTTGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22914 GCACCTGAGGACCCTTCGAGGGATGAGGAGAAGAGGAAGGGGTGGTTTCATGGTTATTGT Gene BVT0102_115943 + 1 EMBV3_15198 GK000017.2:73036952-73113526 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08252 GCACATTCTCAGAAGCTCTTGATGTCACTCTAATTAGGAGGGGAAAATGCTGCTAATGAG Gene GeneID:510743|ARHGAP18:NM_001110772:9_cdna Constitutive 0 NULL GeneID:510743 9 GENE ARHGAP18 MGC159990 Rho GTPase activating protein 18 EMBV3_24207 ACACCCTTTGTCTCAGGTCAAATTCGAACACAAAGGAGCCTTCCTGGGTGTAAACCCTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05279 ACAGAAATGATTGTGGGAACAGCAAGCTCTGGGTCATCCATCCCAGATAGCCAGTCATCC Gene GeneID:508062|ZNF135:NM_001076816:22_cdna Constitutive 0 NULL GeneID:508062 18 GENE ZNF135 MGC143439 zinc finger protein 135 EMBV3_43384 CAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCGCCTTATGGAGTATACGGGCAG Gene GeneID:614540|TIAL1:XM_002698539:32_cdna UTR3_Alt 2 NULL GeneID:614540 26 GENE TIAL1 NULL TIA1 cytotoxic granule-associated RNA binding protein-like 1 EMBV3_16243 CTTGCGCAACTGGCTTAACCTCTCTGAGTCCCAGTCTCTGAAGAGAAACACTCAAGGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40697 GATTCTTCTCTCATGTAAGCCATAATAGAGTATTGGGTAGACTGAATGCCCGTGTTTTCC Gene BVV0102_207373 + 0 NULL GK000001.2:86455262-86666812 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004437 1 XLOC_001041 NonCoding TCONS_00004437 XLOC_001041 NonCoding NonCoding - 1:86465456-86599011 - TSS2219 2394 2 TCONS_00004437_5 88 0.327903091060986 3 0.982097129251089 0.000724417429102454 0.000393888819194037 0.000530985271893406 0.0004774865132303 0.000466211746586644 2.04606340852157e-05 0.000250605679790701 0.00045758176441918 0.000971698635364574 3.55191645285829e-05 0 4.48080080826123e-06 0.00019599982247496 0.000146058131582205 3.60724679088825e-05 0 0 0 0.0002926147732948 0.00039471387829687 0.000181976536258306 0 0 0 0.0004439918474519 0.000227910919767561 0.000231091987193199 0 0 0 XR_231565.1 LOC100140403 PREDICTED: Bos taurus uncharacterized LOC100140403 (LOC100140403), 9e-76 289 90.91 0.0856307435254804 NR_038985.1 LINC00856 Homo sapiens long intergenic non-protein coding RNA 856 (LINC00856), non-coding RNA. 2e-46 192 73.86 0.145363408521303 0 noncoding 0 0 0 0 -0.0261566122182717 0.859527069420173 0.0397479387163417 0.421224667536777 ACTGTCTCAGGTAGAGGTCCAAGAATTTGCATTTCTAATGGGTTCCAGGTGATGCTGTTGCTAATGATTCTGGTTTGGGGGCCATGCTTTAAGAACCACTGATCTAAAACCTAAGGCAGGGTTTCTTTAAGATGGTTTTAAAAGGACTGCCTTGCTCTTAAAAGGACTGCCTTATTCGGTTAACACCCAGCATTTGGTAAGAAGGCAGATCCTAGATTCCAACCCCAACTCTGAGGAAGCAGATTCTCTGCGTTTCGGGAACTACAGATTCCGTCTCAGAGATTTCAGTGAAGATTCCTCTTCACCCCTTTGAATTCAGAAGGATGGCATAGATGTCTTCAAAATATATTTGAAAGCAGTCTTCCAGCTGTCTCTCCCACAGTGCATTAGACATGTCAGGAGGTTCTTGCAGCACCACTGAAGAGAAATGCTGAGGATTGGAGCAGACTGGAGGCTGTGTGGACTGAGGGGAGGTGGTGTGCTGGGCAGAGTGTGGGAGTTCCATCATCGGGGTCTAGCAGGGTGGAAATACGGGGCTGATGGTATCATGACAGACTGCTGAAGGGAGAGAAGTAATGAAGCAACAAAGCTCCATGCGAGTACTACGTTAGTCTGGTCAGGCTGCTATAAGAGAACACCATAGGCAGGGTGGCTTATAAACACTAGGAATCTATTTCTCATGGTTCTGGAGGCTAGGAAGTACAAGATCAAGGTACTAGCAGATTTGATTTCTGGGGAGGTCGCGCTTACTGGTTCATAGACAGTCACCTTCTTATTATGTCCTCATATGGCAGAAGGTGGCAGAGAGCTCTCTGGGGTCACTTTAAAAGGTACTCATATCATTCATAAAGGCTCCACCCTTAGGACCTCTTCTCCTCACAGAGGCCCTGCTTTCTTAATACTGTCACATTGGGGGTTAGGATTTTTAACAAATGAATTTTGGGAAAACACGGGCATTCAGTCTACCCAATACTCTATTATGGCTTACATGAGAGAAGAATCTAAAAAAGAGTGGGTATATGTATAACTGAGTAGCTTTGTTATACACATGAACATAACACAACATTGGAAATCAACTCTACTCCAATTAAAAAAACATTCAGTCTGTACCAAGTAGTTGTGCTTTGAAACAGGAAGATACAATGAGCTTAAACTCAATAGAGGAGTGAGAGGACAAAGCAATGTTTTCTCTCTGATAACTATTAGGAGAGCTCTAAAGGCTATAGATGTCAAGACTCTCCAAGACCTTGAAACACTTGATCAAAAACAACAGAAAAATATGGACGTGCCTGGTTCTGTGGTTACTTGATGCTGGAATCCAAAGTATGAGACATTTAAGGCTTTTACCTCAAAGTAAGATTGAAAAAAACTGGGATTAGATTAAAATGGTTTAATAATTGTTGAAGTTTAATGGAAAAAGTACTTAATTTAAATTTCTTTTAATTTTGTCCTAAGTTACATATTTTAGTCGCTTTCTGCTTTTTGTGACCTCTGATCACCATTTCACTTGGCATACAAAATTATTTACTTCTTTACTTGTGAAAATGGACTTCCCTGGTGGCTCAGACAGTAAAGCGTCTGTCTATAATGCGGGAGACCCAGGTTCGATCCCTGGGTTGGGAAGATCCCTTGGAGAAGGAAATGGCAATCCACTCCAGTATTGCCTGGAAAATCCCATGGACAGAGGAGCCTGGTAGGCTACAGTCCATGGGGTCACAAAGAGTCGAACACGACCCCATGAGCGACTTCACGTTTGTTACTTGTGAAGATGTAAATCGGGTCCCATCACCTGTCTGCTTACAAGTTTTCCTAAATGGCTTCCTGAATGTGACTGGTAGGGCTCTTCACTCATAATTCCCAGGCCAGTGGCCTTTTTAATCTCTATGGAGCACTCTGACTCCAAGCCTGTTCCTGCTCCCACATTTACTTGGTGGATGTCAGTTCTCAATTTGGTGTCCCTGCATCCCAGACAAATACAGACCTAAGTCCTAAAGAGAATAGAAGCATAGCATTCACTGGAAAAAAGAACAGGTTGTTCTTTAAGAATTATTTATGAAAATTTATGTACACGTATAGAGGTATACACAAACTCACACAGACACACACCTGATATCATTTCTAGGAGCTCAATCAAGTGATTTTAAGGATTACTCGAGAGTATTTATGATGTCGAAGTAGTTTTTATAATTTGGTGTGGGTCACTAACTGGGTTAAATTAAGAGAAAAAATACATAGTTTTAAAATGAGAAGGTGAGATGCTGGTAAAGAGGGAGAAAAAAAGCAGAGATTTGGGCAGTGGACACTTATAAGATTCTAATGTCAATCTCAGTAAGCATGACTTCTCTGAGTAAACTGCCTGAGGTGATATGTCATTTATCCATTCATTCCCTTCAT TCONS_00001451 r 5' 199309 TCONS_00001451 r 5' 67802 EMBV3_04692 ATCACGTCCTTCCTCTTGGCACAGCTCTTGTCCAGCAGCCAGAAGTCATGGCAGAGTCCA Gene BVT0102_194282 - 1 EMBV3_43664 GK000011.2:74174552-74319475 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09348 AGAACATTCCCTAGACGTTTCTAGTTGTTGGAAGTTGCCTGCCCTCCGGGTCTCCTGGCT Gene BVT0102_140216 - 1 EMBV3_33598 GK000013.2:43610263-43625060 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045262 1 XLOC_026393 NonCoding TCONS_00045262 XLOC_026393 NonCoding NonCoding - 13:43613141-43617713 - TSS33074 684 1 TCONS_00045262_1 38 0.747076023391813 2 0.850798512360534 0.000323235504891304 0 8.45577963419875e-05 0.000165920814056407 0 9.5875944016383e-07 1.70517400472562e-05 1.08090563077847e-06 0 1.94496063268136e-05 7.41990325139001e-06 2.97858765227668e-06 0 8.71109752928766e-06 1.67470458011015e-05 0.000885816501657176 0.000209956165040418 0.000297204609435121 5.24190796413096e-06 0.000120821018176748 0 0.000554798565225558 0.000505566231452928 0.00130827466763296 0 0 0 2.88311205436957e-05 3.85450746373808e-05 4.19159742421861e-05 XM_005208073.1 ART3 PREDICTED: Bos taurus ADP-ribosyltransferase 3 (ART3), transcript 2e-70 269 88.29 0.320175438596491 0 noncoding AGAGGGGCCATGTGGCAACAAAGACGGAAGCAAAGACGGAAGCAGGGGAACTGCCGGCTTTCAAGACAGAGGAAGGAGCCAGGAGACCCGGAGGGCAGGCAACTTCCAACAACTAGAAACATCTAGGGAATGTTCTCCCCTAGGAGCTCCAGAAAAATTGCAGCCCTGCTGACCCGTTCTGGGTATCTGCCCTCCCCAACGATATCTCAGGAGGAGAAAAGCTGAGTGCAAAGTCCCTGGATGATGTCCCACAGCCAGCAGACCTGCCCAGTGGGAGGGATGCCAAGGAGTGATCAGACCTTGAAAGGTTATTGCTGAATCACGCGAATACACCAGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGAACGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGAGGCAGAAAGAGTACCCCCCTGCTAGTCTTTAGCTGGATGTTATATAGTCACTAGCAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGATGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGGCAGACCACCATACAAATAGTTTCATTTACATTAGGGGATTAGGGGAACAATTACATTAGGACAATTACATTAGATTAGGG TCONS_00042776 r 3' 2880 TCONS_00042776 r 3' 3362 EMBV3_14208 GTCATGTCTTCCCGTAGACCAGGCTTCTGTTTCCCAGGGTGGATGTGAGTGTAGGGAATA Gene GeneID:507151|RPL15:NM_001077866:2_cdna UTR3_Alt 1 NULL GeneID:507151 27 GENE RPL15 NULL ribosomal protein L15 EMBV3_27773 AACAATGAGAATCTCCGCTGCCTTTTCCAGCCTGGTGCCTTCTCTCAGCCCGCAGCTTCA Gene GeneID:523631|LOC523631:NM_001077958:37_cdna Constitutive 0 NULL GeneID:523631 X GENE LOC523631 NULL testis-specific histone 2a-like EMBV3_38768 GCACGGAGAAGTTCAGGACCAGCAGAGACCGGAAGGGACCCCTTGTGGGTGACCAGGGTG Variant GeneID:616110|ZNF511:XM_002698473:515_cdna 502^849 2 EMBV3_23692 GeneID:616110 26 GENE ZNF511 NULL zinc finger protein 511 EMBV3_19523 ATGTGGAAAAGGTGACGACCTTCGAGCACCGTGAGTACGACCAAGTGCTGGTGGAATCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02162 GGGTCTGGCCCGTGTCTTTCTCGGACTGGGAGAAACTGGATGCTGAGGAGGTGTCCCGGG Gene GeneID:282604|FDXR:NM_174691:329_cdna Constitutive 0 NULL GeneID:282604 19 GENE FDXR AdR MGC139581 ferredoxin reductase EMBV3_27331 ATCAAGGACGTGAAGCTGCCAGTGCAGTTGCAAGGTCATTGCGGCTGAGGGAGAAATGAA Variant GeneID:100125834|STOM:NM_001105473:2_cdna 628^674 2 EMBV3_03288 GeneID:100125834 8 GENE STOM MGC179290 stomatin EMBV3_00182 GGTTCATAAGACTCCAGGTGGCCTGTTCAGACCCTATTATGGCAAGAGCCAAGAAGAGTC Gene GeneID:100296787|LOC100296787:XM_002692282:1636_cdna Constitutive 0 NULL GeneID:100296787 13 GENE LOC100296787 NULL hypothetical protein LOC100296787 EMBV3_06271 AGAGGGGCCACTGGGTGACAACCACTTTGGTATCTGTGAGGTACTTTTCTCATCCTTGGA Gene BVT0102_094646 + 0 NULL GK000002.2:25070548-25130227 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101916 TCONS_00101913 TCONS_00101917 TCONS_00101915 TCONS_00101918 1 XLOC_061788 Coding TCONS_00101915 XLOC_061788 Coding Coding METTL8 2:25070920-25155980 = TSS76045 2500 1 TCONS_00101915_4 382 0.0876 11 0.970737958358316 0.00234317991134254 0.00123087255257472 0.00106869331911757 0.00202617349284219 0.00106174429208327 2.55929109964698e-05 0.000293543737117473 0.00106333556520585 0.00149764933079232 0.000119475328668558 2.93082437635814e-07 4.09433914684878e-23 1.85426546497926e-07 7.16128328727697e-05 1.88291676451565e-06 0.000258083417651793 9.33659933461165e-14 4.36966090915065e-30 0.000580683466772283 0.00205674110858959 0.000307382576980448 7.91637605898692e-05 0.000127339222089675 1.51170702013018e-23 0.00287911179257966 6.38461294771715e-17 0.000898776686608979 1.21769230393774e-40 7.71750934701141e-34 3.26024866965886e-28 NM_001075288.2 METTL8 Bos taurus methyltransferase like 8 (METTL8), mRNA. 0.0 3822 100.00 0.8472 NM_024770.3 METTL8 Homo sapiens methyltransferase like 8 (METTL8), mRNA. 0.0 1618 82.54 0.6424 TCONS_00101915_4 sp|Q9H825|METL8_HUMAN METL8_HUMAN Methyltransferase-like protein 8; 1e-151 434 73.87 0.683246073298429 6 noncoding 0 1 0 0 0.319144471624478 0.475904531406497 -0.0126334094237395 0.812329610586483 GTGGGGGCGCTGTGCTGCCGCCTCTTGGTCTGTGTTCCGTGTTCGCTCCGTGCACTCAGGGGTCCGTCCCTTGCCGCCCCTGTGCCCCCACGCTTGTCAGTCCCCGACTTTCGCTCTGGGAGCCCTGGCTGGGTGTCGAGAGGGGGTCTGTGTCGTGTGCGACCGCCCCTCCCCTCCCCACAAGGCAGCGTCTTGTGAAAAAGAAAGGTACCTATTAGGATGAATGTGATTTGGAGAAATTATATTTCCTGTCCAAGGATGAGAAAAGTACCTCACAGATACCAAAGTGGTTGTCACCCAGTGGCCCCTCTGGGATCAAGGATTTTAACTGATCCAACAAAAGTTTTTGAACATAACATGAAAGGAGAACAAGACCTTTTGAAGTATGAGAGTGAAGCCAGTAAATATTGGGACACGTTTTACAAGATTCATAAGAATAAGTTTTTCAAAGATCGTAATTGGCTATTGAGGGAATTTCCTGAAATTCTTCCAGTTGGTCAGAAAACTGAAGAGAAGGTGAAAGAATTATCATGGAATCATGTAAAAATTAATGCTGAAAGTTTTTTCTCAAAAATGCACTGCCCTACTATGCCTGAAGAAAAAAATCATTATAAAGAAAGTTCTGGCTCATCAGATGGTCAAAGCAAAGCAGGATCTGACTTTTCTAAACTGGATTCTGAAGAATACAGAGAAAGACCTCTGAAGACTGAATTGTTTCCTGGTAGCAATGCTGCTTTCAGAATCCTTGAGGTTGGCTGTGGTGCTGGGAATAGTGTTTTTCCAATTCTGAACACTTTGCAGAATGTGCCGGAGTTCTTTCTTTATTGTTGTGATTTTGCTTCTGGAGCTGTGGAGCTAGTAAAGTCTCATGCATCGTACAGAGCAGCCCAGTGCTGTGCCTTTGTTCATGACGTTTGTGACCATGGCTTACCCTACCCTTTTCCGGATGGGACCCTGGATGTCATTCTCCTAGTCTTTGTTCTGTCTTCTATTCATCCTGACAGGATGCAAGGTGTTATAAACCGACTGTCCAAGTTACTGAAACCTGGGGGAATGCTGTTATTTCGGGACTATGGAAGATATGATAAGACTCAGCTTCGTTTTAAAAGAGGACATTGTTTATCTGAAAATTTTTATGTTCGAGGAGATGGCACCAGAGCATATTTCTTTACAAAAGGGGAAGTGCACAATATGTTCTGTAAGGCTGGGTTAGATGAGAAGCAAAATCTGGTTGATCGTCGCTTACAAGTTAATAGGAAAAAAAAAGTGAAAATGCACCGAGTGTGGGTTCAAGGCAAATTCCAGAAGCCATTACACTTGACTCAAAAAAGCTCCAACTTGGTATTTTCAGTCCTTTCTCATGAATGAACTATGTATCATGTTAAGGTAAAACCAGAGGATTACACTATTCAGAGTCTTCAGTAAATCTTTCATTTTTGAAAAGACAGTCAGAAGAAGAGAATTTATGTATCCTGCTGTTTATCGTGGATGGACTGTTTTATGCATTTTAAGCACACAGAAGTGACTTGGAAGAGAGCACAACATTCTGTGTTTTCAAAACTTAATATGCTCAAGCTTGTTTGGATTTATTATGTCTTAACCATTTTGTTTGTTCTCTGAGTTTTAAAAGCATTTAGGTAAATTACTGATATAAGTCAGATGATTCTGAGAAACCAAAGCCTGCCATTTTTTAGAAGTGAAAAAAACCATCTCCTTTATTTATACATTAGTTGAACACAGCTGAACTCTCCTCCATTGTTAACTGATAGCAGAGTCAGCTTGCCTTGTTTCCAAGGAAAGTCACAAGACCAAGGCAAAGGCCTATTTTTTTGTTTTGTTATTGTCTGTTGTCCATCCCCAAACCTTTTTTTTTTAATTTAGAGACTAATGTCTGAAACAGAATTTTAATTTATCTTTCCTTTCCTAAAATAGGGGAAGTATGACTAATGCTAACATTATTTTCAGGCTATTCTTTGGTGTACAAGTTGAAAGCCTTCTTTAAGAAGACTATTTACCCAGGAAAATTCTTAAATTGTAGCAATTAAAAATTTTTTACTATTTGCTGGTGGTCCAGTAGTTAAGAATCTGCCTGCCAATGCAGGGGACGTGAGTTCAATCCCTGATCCAGGACTTAAGATCCCACATGACATGGGGCAACTAGACCTGCCCACCCTCGTGCTCCACAAGAAGCAGCAGCCACCGCAATGAGAAGCTTGGGCACCACAACTAGAGAGCAGCCCCAGCTCAGTGCAACTAGAGAAGGCCTTCGCACAGCAATGAAGTGCCCGTGTGCTGCATCAAAGACCCAGTGCGTCCAAAAAAATAAAAATGGTATTTACCACTTTGCCTCAAAAAAGATATAAATTGGCTTGCAAATTGCATTTAGTAAAAATGGAGTTTCTAAGACTGGTCTTTCATTTGTTACACAATGTATACTGAGTACTTACTTTGTGCTGAATTATATGGAATAATACAATAAATAAATAAAGTCCCAGCCCTG EMBV3_12470 CGACTTGATTCCTGTGGCTTTGATTGTAATGTGAACTCTCCCCCTCCACTTCCGATTTCC Gene GeneID:528288|GIMAP6:NM_001099712:688_cdna Constitutive 0 NULL GeneID:528288 4 GENE GIMAP6 NULL GTPase, IMAP family member 6 EMBV3_19167 ACTGTCTTCCCAGACCATGCCTATGGTGCCACTGGGTACTATGCATCATGCCACAAGATT Gene GeneID:100295854|LOC100295854:XM_002700153:39_cdna Constitutive 0 NULL GeneID:100295854 X GENE LOC100295854 NULL similar to FK506 binding protein 1A, 12kDa EMBV3_28526 CATGTCGTCACGGGACAAATCAACAGCTGTGCCCTGTCTCATCTGCAGCTAAGGAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37843 ACTTTTGGCTATAACAAGAACAACAAGAAGATACGGCAAGATTGTCTCCACTAAGGCCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38925 CTACACGGTCCCGAGCGGACGGGCAGGCTGGCCCAGCAGCCCCGGACCCGGGCTGGACTG Variant GeneID:281667|CCNA2:NM_001075123:37_cdna 137^363 1 EMBV3_32023 GeneID:281667 6 GENE CCNA2 CCNA MGC139704 cyclin A2 EMBV3_16622 GAGAATCTGTGTCCAGCCACAAAATGAACAAGAATCGCTACTGAGTCGTCTCCAACGGGG Gene GeneID:505350|TULP2:NM_001098873:121_cdna Constitutive 0 NULL GeneID:505350 18 GENE TULP2 MGC165743 tubby like protein 2 EMBV3_35049 AACTGGAAGCCTGCTGTTAACCACACGGGCCAGCATTAGGTTCTGATCTATTACCTGACC Gene BVT0101_002838 + 0 NULL GK000019.2:20388608-20391105 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095549 TCONS_00092590 TCONS_00095553 TCONS_00095552 TCONS_00095550 TCONS_00092587 TCONS_00095548 TCONS_00092589 TCONS_00095551 2 XLOC_057740 XLOC_056926 Coding TCONS_00095552 XLOC_057740 Coding Coding POLDIP2 19:20388701-20398917 j TSS71204 3536 1 TCONS_00095552_2 246 0.0820135746606335 7 0.654527655408713 1.04404355769226e-11 3.82214677191651e-19 7.14985753038749e-18 1.72392709349173e-14 5.33403413497074e-11 5.18383008561522e-12 5.70809258158528e-16 4.03557497093507e-15 1.69591829748968e-09 6.24414340306369e-09 0.000474584621802885 0.00018669661685152 1.19711870836328e-12 0.000201650235191921 1.6911518003657e-21 0.00105268118597651 3.31135863288781e-08 0.00044710144367567 1.19904750191495e-17 1.65056228905803e-27 1.99761667646684e-06 8.78326169033139e-12 1.19311349028278e-11 0.00136832897571814 7.63946244327687e-05 7.20156419184118e-05 2.94913417719437e-08 3.68738761504777e-07 0.00036732104307855 7.57209582976327e-24 XM_005220113.1 TNFAIP1 PREDICTED: Bos taurus tumor necrosis factor, alpha-induced protein 1 (endothelial) (TNFAIP1), transcript variant X1, mRNA. 0.0 2527 100.00 0.395927601809955 NM_021137.4 TNFAIP1 Homo sapiens tumor necrosis factor, alpha-induced protein 1 (endothelial) (TNFAIP1), mRNA. 0.0 706 71.88 0.386877828054299 TCONS_00095552_2 sp|Q9Y2S7|PDIP2_HUMAN PDIP2_HUMAN Polymerase delta-interacting protein 2; 4e-95 288 92.52 0.59349593495935 1 coding 0 0 0 1 0.0380057098378134 0.805297771266927 -0.170955694142323 0.170608125611074 GCCCGGCCGCGGGTCGGGTGGTGTGTCAGCAGCCCAGCGGGAGCTCGGGCGAGACATGGCGGGCTGTGTGGCCCGGCGGGCCCTGACCGTGGGCAGTCGTTGGTGGTCCCGGTCGCTGACTGGGACCCGGGGGCCGAGGCCGCTCTGTGCGGCGGGTGGAGCTGGGGCCTTCCCACCCGTGGCGACCACGACGACGCGGAGGCACCTCTCGTCCCGAAACCGACCAGAGGGCAAAGTTTTGGAGACAGTTGGTGTGTTCGAGGTGCCAAAACAGAATGGAAAATACGAGACTGGACAGCTTTTCCTTCACAGTGTTTTTGGCTACCGAGGTGTCGTCCTGTTTCCCTGGCAGGCCAGACTCTATGACCGGGATGTGGCGTCTGCAGCCCCAGAAAAAGCAGAGAACCCTGCCGGCCATGGCTCGAAGGAGGTGAAAGGCAAAACTCACACTTACTATCAGGTGCTGATTGATGCCCGAGACTGTCCACATATAGCCTGGATTATGTCAGCCACGAAGACATCCTCCCCTACACCTCCACTGATCAGGTTCCTATCCAGCATGAGCTCTTTGAAAGATTTCTCCTGTATGACCAGACAAAAGGAACCAGTGTTATCCAAGGAGCAGCCCGCCTTCCAGTACAGCAGCCACGTCTCCCTGCAGGCCTCCAGTGGGCACATGTGGGGCACTTTCCGCTTCGAGAGGCCTGATGGTTCCCACTTTGACGTCCGGATCCCTCCCTTCTCCCTGGAAAGCAATAAAGATGAGAAGACACCGCCCTCAGGCCTTCATTGGTAGGCCAGCAGAGGCCCTGAGCACCCAGGCTCCGCCCCGAACAACAGCCCACATCCCATGAGAGTTGCTGCAGAACTCTGTCACGGCCACAGTGGGTCTCTTAATCGTTTGTGCCATTTGACTTCGGTGTTCTTACTTTGGCGGGTGGAGTATGACTTCTGCAGAAGACCCACGTGGGCCTCCTCCAAGGCTGGCCTTCCCCGTATGCCCTGCCTACGCTGTGTTCCAGTAAACCTTTCCATCAGGAACTGTGTTCAGCGGCCATAGGTGTGGGGGTTCCCTAGCCTGTCACACAGTTGTTAGAATGCGAGGTTTGGGCAATAAACCAGTGCGCGCTTGGCCACCCTCGCCGTTTCTGCCCCCCGACGTCTCAGGCTCCCTTTCTGACCCGGCGGGGGCCCTTGGTTACTGTCCTTAACTGCCCTTCAGGAAGCTGCCCCTTCAGCTAGGGTGTCTGTCTCCATCGTGGGGCAGGGGTTTGCCTGATGTCTCCCAGGTCACTCAGCCAGTGAAGTGGGGGATGGGCTGGACTCTGTTTTCTTTACCCTCTGCCAAGTGCAGAGCTGGAGGGCGGCAGCAAGGTCAAAGGAGTAAGGCAAGCCTGTTGGGTTTCCTGGAGCAGTGGGCCTGCCAGCCACGGGCACAAGTCTGTCAGGCCTCCAGTTCAGAAATGCAGAAACTCAGCCAGGGAGCGTTAGGTATGGACAGTGACTAAGCCAAGCTACTTTCTGAGCTTCTTGAAGATCTCCAAGAGCCAGAGATAAAAATGTGCTGCATTTTTGCCCCGATTCTTAGGATTCTTGCTTGCTCCCTGACTACCATTTTCTTAATATTAAATTTCAGTTCCAGCCCTTTACAGTGTTGTCCTTAATCCTCCACCTTAGCTCAGCTGGCAAAGAATCCGCCTGCAATGCAGGAGACCCCGGTACGATTCCTGGGTCGGGAAGATCTGCTGGAGAAGGGATAGGCTACCCACTCCAGTATTGTTGGGCCTCCCTGGTGGCTCAGCTGGTAAAGAATCCACCTGCTATATGGGAGACCTGGGTTCGATCCCTGGGTTGGGAAGATCCCCTGTAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTGTATAGTCTGTGGGGTCGTAAAAAGTCAGACATGACTGACCAATTTTCACTAATCCTCCACCAGGGGGAGCCTGGGTTGCAGGGCAACTGAGTGCAATGGGGCATAGGCCCCAGTGAGAAGGTCAGGTCAGGTGGTAAACAGAAATACATGAATTATGGCCACACAGCAGTGAGTGACCAAGCTCTACTCCCTGTAAGCACGGCTCTGAAGCACTGCAGTGTAACACAGGTTTATTAGAAATTAGTGTTTGCTTCCATCACCTATGCTGAGCAACAGAGAATTGTAGTTACATGATAAAGAAGTTCTTTCATGCCAGGACCTGTGCCATCCTTCAGCAGACCCTGGTCAGGTAATAGATCAGAACCTAATGCTGGCCCGTGTGGTTAACAGCAGGCTTCCAGTTTTCTTAGAAACTGACAAGGTTTAACCTTGATCCACACTTTTTGTGTACATTCCCCAGGGCTGCTCAGAATTGAAAAATTTACACAGCCAAGAGCATTTTCTGAATGGGGCTGGGAAACTCAAAATTCCCCAAACCCTTACAACACAGTCTGACTTTAAAAGCTAAGATTACTTCAGTGAGTTCAATGTTAGTATTTTAAAACCAAAGAGAGATTTTCAACTGGAAGAGATAAGTGCCCAGAGTCCCAGACTGTTGTGCTGTCTCAGGAAGAAAAGACTGCTCACCACTGAGACAGCTGAGGATCTCAAAGTCCCAGCAGTGAAGAGAGGCCCAGGGACTGGGGAGGTTAAGGGACAAGCATTAAAATACCTCAGTGGGGAGCTGGGACTTTTTGAGTATTAACGGGCTTTGGGAAGGCAGCTGAGGAAACAGACTGGTGGCCTCAAGCAGAAGCATTCCAGTCACTGTGGGAAACCCAGAGTTGGAATCTGGCCAAAGAAATGGATTTGTCTTCATCTTATTACTCCAGTGAAGGCTTGAAGAACCGTTCATAGCTGACCATCAAGGTGCCTCACCTGAAAGTCTATACATTCAAGAGTACGACTAGCGTAAAACGCCTGATTAGAGTCACCTTTCTCCTGCCCTAGCACAGGTCTTCGTGTCTACTAATCCTGGCCTGGCATTTGCCCATAGGCTCAACTGTAAGCAGCCACTTAGCTATGGTCAGAGTAGTCAAGAGACATGAACTTGATCAGCTATGTCCTTTCCTGACTGAGTGGGTACTGTTGAGTGCAGTGCTGGTTTGTTAGGTTGGCTGAACAGCTCCTTCCTGGTGGCATTCCTTTAGAAAAGAATTCAGATAGGCAGCTGCCCGCGGGCCAAGCCAAACAGAAGGGAATGAAAACCGAAGCCCTGAAGAGGAGCTTGGAACTTGCACCCTTACCCAAGGGTGCGGCATCTCTAGAGCCAAATTTACCCAACAAGAAAGAAATGAAGAACCCTTTCAAGGCTTTTAGGCTACACACATTCTCCTCTGTTCAGGGACTCACCACTGGGCAGAACCACCATCCCCAAAACCAACAACATGGATGGGGGCGGGGGGATGGATGGCCAAGCATAACCACCTCAGTGGGGCCCCCGGGAATGCAGGGCTCTGTGTTTGCTGTCCTCGGATGACGGGCAGGTGGGTGTGGGGCCCATGGGCTCCAGCC EMBV3_20832 CCATCAACTTACACCCTTGCACTTAATTCTGGCTACTCCAGCATCACCGTTCCAAGCCTC Gene GeneID:519224|TPRKB:XM_002691206:22_cdna Constitutive 1 NULL GeneID:519224 11 GENE TPRKB NULL TP53RK binding protein EMBV3_18224 GCTGGGAGTTTAAATTTGTTTGAGCCTTGCTGGAAATGTTCTAAAATTGACTGTGGTGAC Gene BVT0102_039022 + 1 EMBV3_27561 GK000027.2:33164813-33231775 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36475 ACTCAACTCCTCTCACCACTTCAACCCCACTCAGCCCCACACACCACCATGACCGTCTCC Gene GeneID:100295015|LOC100295015:XM_002695974:318_cdna Constitutive 0 NULL GeneID:100295015 19 GENE LOC100295015 NULL similar to keratin associated protein 2-4 EMBV3_15044 GACTGCCAGACAGCTTGTGTTTTCTGTTGCTTAGGTTGGCTCAAGTCTGTGGATTGGGGT Gene BVV0102_006626 + 0 NULL GK000001.2:120209344-120236685 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001986 TCONS_00001982 TCONS_00001985 TCONS_00001983 TCONS_00001988 TCONS_00001984 TCONS_00001987 1 XLOC_000491 NonCoding TCONS_00001983 XLOC_000491 NonCoding NonCoding CPA3 1:120208539-120296265 x TSS1019 1212 3 TCONS_00001983_3 45 0.200495049504951 6 0.986252493587917 3.11254590529302e-05 0.000175334033547155 0.000165033536300806 0.000211021923986521 0.000228532183095211 5.75666073447262e-48 2.00998413887002e-05 4.86470849401924e-05 8.26832852635347e-05 2.46696156245043e-09 1.87729461187977e-14 0 1.07184151248213e-17 0 0 0 0 0 4.49916131933074e-139 5.12687564336349e-34 0 0 0 0 0.000299880808097725 8.89689989755768e-05 0.000167088602900007 0 0 0 NM_001102041.2 KIAA0226L Bos taurus KIAA0226-like ortholog (KIAA0226L), mRNA. 1e-77 295 87.45 0.200495049504951 NM_017550.1 MIER2 Homo sapiens mesoderm induction early response 1, family member 2 (MIER2), mRNA. 3e-15 87.8 74.05 0.126237623762376 0 noncoding CAGTTCCCAGAGGAAGAAAAAGTGAAAGAGAGCAAACAGGCGCGGGATGTGCTGGTGAATTGCAGTTTCAATGCTTGAGGTCCCTTGTAGGCTTAACTTGAACATGGCTTCTGTGAATCCCCAGTGCTTCCATACAATCAAGGGCAACAAGGTATATAAGTGGTCCATGGCGTGAGTGGGGAGTACTACTCTCTGTGGAAGAAGTTGGAGCGCTCAGACTCTTCTGAGCAGACGCGGGAGGAGGCAGAGGAAGTACTGCCCTCCAGGAATCGCAGACACAAACCAGGACCATGCCACGTGGTCCTCACCGCCCTGCCCTGTGACAAGCAACCAGGGAGAGGAGCAGGATCCCTGGGCATGCATGTGCACAGTGCGCGGAGCAAGGAAGGCACGGCTGTGTGTGGTCTTGGCTCCACCACCCTGTTCCAGGCTTCTGCCTCCACTGTGGCCCCATCTGCATTTGGATACTCACCCTGTACCTGAAAGCCAGCAGAGGTGAAGGGACGGCCAACTTGCCCACCATCCAATAAAATGTGGATGCACTAGCAAACCAGTCTTCATTATTGACTGCCAGACAGCTTGTGTTTTCTGTTGCTTAGGTTGACTCAAGTCTGTGGATTGGGGTCTCGTCTGCTTCACCAGTACCAGTGGCTGTCTGGGGCATGCTATTCTCATTGGAGACCACAGAAATATATGAGAGCTGGACTGTAAAGAAGGCTGAGCGCTGAAGAATTGATGCTTTCGAATTGCTGTGTTGGAGAAGACTCTTGAGGGTCCCTTGGACTGCAAGGGGATCAAACCAGCCTGTCCTAAAGAAATCAGCCTTGAATATTCACTGGAAGGACGGATGCTGAAGCTGAAACTCCAATAATTTGGCCACCTGATGCGAAGGACTGACTCATTGGAAAAGACCTTGAGCTGGGAAAGAGTGAAGGTCAACCAGGAAGGATACTTTTATTTGGGGATCTAAGTAAAGGTTGGAAGAATCCTGGTTTTTCTTAAGACTTTGGTGATAAACAATCTTTGACTTCTTAACGTCTGCTGCGTATTGACAATTCCTTGTTTCTGGAGTAGGACATAGACTTCTTGAAGATGGTTTCACTAGAGGAAGCGTCTGACATGGAAGAAGAATGAAAAGGCCTCCTCCCACTGTGAAGAGAGATCACTCTGATGGGTTTTGGAGAGGCTCTCACTAAGTCTCCAAATTGCATG TCONS_00005060 r 5' 450 TCONS_00005059 r 3' 28146 EMBV3_00643 CCTTGGTCTAGAAAGAAGGGGAAAAGGATGAATAGCTGTTACCCACTCCACGGTTCTCAA Gene GeneID:541166|ETV5:XM_002684842:193_cdna Constitutive 2 NULL GeneID:541166 1 GENE ETV5 NULL ets variant 5 EMBV3_09411 TCTGCAAGTGGCTCAAGAAGCACTGTCCCCACAACTACCTCGTCTATGTGGAGGCCTTCT Gene GeneID:540999|SAMD10:XM_002692398:332_cdna Constitutive 0 NULL GeneID:540999 13 GENE SAMD10 NULL sterile alpha motif domain containing 10 EMBV3_39846 GGGACAGGGACCTGGGGGCGGCCACGGCAGATTATTGTGGACGATGATGATAGTAAGATC Variant GeneID:404069|SPG21:NM_205772:56_cdna 98^184 1 EMBV3_27662 GeneID:404069 10 GENE SPG21 MGC140003 spastic paraplegia 21 (autosomal recessive, Mast syndrome) EMBV3_10164 TCAGTATCTGGGGAACTGCAGAGACCCCCCCAGGATTATAAAACACACATCTTGCTCATC Gene GeneID:617625|RBM43:NM_001099168:160_cdna UTR3_Alt 1 NULL GeneID:617625 2 GENE RBM43 MGC159967 RNA binding motif protein 43 EMBV3_26770 CACTTATCCTTCTAGTCAGCACAGTCTTAAAGACATGAAGACCTCAAGATAGTGGGTGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28147 TGCTTGCAGATCGGGCACCCAGGAGAGGAGGAGAGAGTGTAACAATCCCGCACCCCAGAA Gene GeneID:527391|C8A:NM_001046285:73_cdna Constitutive 0 NULL GeneID:527391 3 GENE C8A MGC137219 complement component 8, alpha polypeptide EMBV3_36496 ACCTGGGCAGAAACCAGCCCCAGTGAGGAAACTGCACCTGTAGAAGTAGATCACCTGGTT Gene BVV0102_048248 + 0 NULL GK000015.2:65219693-65394509 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059865 1 XLOC_036527 NonCoding TCONS_00059865 XLOC_036527 NonCoding NonCoding - 15:65365805-65367842 - TSS44843 1342 2 TCONS_00059865_1 122 0.0901639344262295 2 0.341846758349705 0.000273736206184766 0.000396846187809122 0.000227556546658323 0.000569285917706421 0.000351341788040919 8.79600836961911e-05 4.34553259926839e-05 0.000233592084113694 0 0 0 0 0 1.05156023136549e-05 0 0 0 0 0.000534346105111464 0.000482285895774522 0.000135725841626351 0 0 0 0.000108418868040015 0 7.42216937820224e-05 0 0 0 XM_005223069.1 CCR9 PREDICTED: Bos taurus chemokine (C-C motif) receptor 9 (CCR9), 2e-31 141 83.97 0.0968703427719821 0 noncoding 0 0 0 0 -1.06230781789646 0.151704953782419 -0.000392489595193349 0.993472093705762 AGGAGACAGGTTTGAGAACTTTGCCTCCTTTCCCCTTGCCGGCGGATCTTCCCCCAGTAAAGTGCTTTCTCAAAAGACAGATTGGTAGCTGGATAACAAGGGCAAAATCCAGTTAGTCAGCAGGACAGGGCCTTCTCTTCCCACCTTGCGGGCACAGAGCAGGACAATACAGGGCACTCAATCTCAAGGCTGAAGCCTGAGTCCTGCAGGGACAAAATGACCAGTAACATCCCGAAGATGGGGCTGGCCACACTCGGAGACCTGGGCACCGTCTCAGCCCAGTTCTGCCTGCCCAGTGTGGCCACGGGGGCCGCAGTCCAGTGTGTGGGGGTGTGGGTAACCCGTGGGCTCCCCTTCCCGTGCTACACACCTGGGGACCCTGCACTTAAAACGCCGGGGAGGTTATCTTCCATCTTGTCTCTGAATGGGGGGCGGCTCAGAAGGAAGCCCAGAAACAGGGCATTTACAGGGTGCGGGAGGGCGGCCTTGCCTGCTTGGTCCTGGAGCAAGGTCCACAGCCCTCCCACCTGGGGTGACCCTGACACCTGGCCCCTGGGACACCTGGGCAGAAACCAGCCCCAGTGAGGAAACTGCACCTGTAGAAGTAGATCACCTGGTTTTCTCCTCCTTTCATTTTGGTGTCGTTTTCCAGAGGTCCACCAAGAGACTCCAGGCCTTTCCGGCACGCCACTGGGTTAACTGGGGGAGATTCAGGACTTGGATCCTATAGGAATGTTGACAGGGAAGGACACTACCTCGTGGTCAAGGAGGTAGTGTATCGGAAAGACCTCAAGGGAAAGCTAGGAGCCATCTGCCCCCAACTGGGAACACCTACCCCTTTTACAGGGACACTCCACCTTCACCCCCAGTTCCGTCCTGCACCTGAAGGGGGCCCCATAGTGCACGCAGGGACACTTTAGCCCCCAGTCCGTCCATATGCTTGCAAACTGTGGTCCCTTGGCCCCCTCTGACCCCAGGGGTGTGCTCAGCAGTGCCCGTCTGTAGCCTCCAGACATCATGACCAGGGGAGGGCAGCACCTGGGGTTCCTAGGGGTAGGAATTCCTGGGGGCAGGGAATTTCAGAGTCCTCAGCAGCCAAAAGGGGGTTGCCAAGGAGACACATCCCATAGCCCCCAGGATTTCTTACCTGGTTGGGCGAGTGGTGAGTCTAGAGAAGAACCATAACACAGCCAGGCTCTCTGACATGTGGGTCTTTTGTTGTTCATTTGCTAAGTGGTATCCGATCCGACTCTTTGTGACCCCTCACACTGCAGCACACCAGGCTTCCCTGTCCTTCACTATCTCCTGGAGCTTGCTCAAACTCATGTCCATTGAGTCAGTG TCONS_00059863 TCONS_00059864 s 3' 2165 TCONS_00059863 TCONS_00059864 s 3' 2165 EMBV3_07860 GGTGGTCTACATTTTGACTGTGGCTCTGCCCGTGTTTCTTGTCATCCTCTTCTGCTGTTC Gene GeneID:407129|canx:NM_001105612:13_cdna UTR3_Alt 2 NULL GeneID:407129 7 GENE canx MGC166317 calnexin EMBV3_36197 AGGACTTCCTGAGACCACCTCCCACACAACTGCTTTCACTCAAATCCTCAGCACGAGGTC Gene BVT0102_273084 + 0 NULL GK000028.2:31173043-31244062 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160635 TCONS_00160634 1 XLOC_097696 Coding TCONS_00160634 XLOC_097696 Coding Coding - 28:31195648-31199256 - TSS120066 1276 2 TCONS_00160634_1 74 0.504702194357367 3 0.647075131688384 0.000969776990640747 3.10983650043862e-05 7.37969566141595e-09 0.000273326461390694 0 0 4.34427511302406e-06 0 0 0 0 0 0 0 7.5301864380846e-06 0 0 0 0.000117748326267889 6.17216509532812e-05 0 0 0 0 0 1.07409624221711e-05 0.000279878532085405 0 0 0 XR_229350.1 LOC101909117 PREDICTED: Bos taurus uncharacterized LOC101909117 (LOC101909117), 6e-37 159 71.82 0.253918495297806 XM_005258195.1 INO80C PREDICTED: Homo sapiens INO80 complex subunit C (INO80C), 7e-36 156 71.60 0.255485893416928 0 coding 0 0 0 0 -0.184351514749682 0.237547106146379 -0.0100127255851487 0.844075534093153 CTCAGCCAAGCACAAGCAGCCCATTGGCTTCCTGCTTCCAGTGGGTTGCAGGAAACCCCTTCCCAACACCTCCTCCCCAGCCTGGGTAGGCTGGGGTCATCCCTACAGAGGAAGTTCAGCCAGATGTTCCTGAGTGAGTGAGAGGCCATGCTGGGCTGTGACCAGGCTGAGTGTCGGGCACACAGTGGAGATCAGAGGCCAGCGACACCACTGGGGGCTGAGCTGTCACAGTTTCCAGCTGGCCCCTGGACTCTGGTTGCCTGGTGTCTCCCAACCGCCTCCCAGGGCTCTCAGAGGCCACTCGAAATGGAAAGACATTTCAAGGTCATCTGCGTCACCCCGACCAGATCCATGTTTTTTATAGAAGCCTGAGGCCCAGAGAAGAGGTATCCAGTGGAATTGAGTCCCAGATGCCCACAGCAATGACCGGCTCCTTTAGACACACTCTGCTGACTTGTCTCCCCTCCCTGGACCCTTTCCCACTCCCCTTCCAGGACTTCCTGAGACCACCTCCCACACAACTGCTTTCACTCAAATCCTCAGCACGAGGTCTGCTGCTTGGGGCACCCAACTTAAGATCATCCATTACTACAGTCCTGAGGACAAGCGTGGAAGGGTCTTGAAGACTTGGGTTTCTATTTCGGCTATTTACACACTCAATACACACATCCAGTCCCAGTGACACCCATGCTGAATGTGACTTCTTGAGGACACACACATCGGGGCACACCAGACCAGCTTGGTCAGGAATGTCCTTTGGCCCTACTCCTGTGTACCAACTGATTGGAGATATGCTCCCCTTGTAAAGAAATGGAAGACTTGAATACTGATTCAGCACAATCTCTGTCAGAAACCCAGCTGACTTCTTTGTAGAAATTGGCAGGCTGATTCATTGCAGGCAGACACTTTACCGCCTGAGCCACCAGGGAAGGCTTATAAAGGATCAGGGATAGCCAAAACAATCTTGAAAAAGAACAACAAAGTAGGAGGACTCATACTTGCTGAATTCAAAATTCGCTACAAAGTAACAGTAATCAAGACAGTGTGGTACTGCACAGGGCTAGATGTGTGGATCAAGGACCTAAAACCGAAAGTACAGATACACCCATGTATCTATGGTCGACTGACTTTTGACAACAGTGTAAAGGTCATTCAGTGGAAAAAGCATAGTCTTTTCAACAATGATGCCAGGACAACTTGATATCCACATGCAAAAGAATGAAGTTGAACCCTTACCTCACACCATAAACAAAAATTAACCCAAAATGGATCAAAG TCONS_00160633 s 5' 22607 TCONS_00160633 s 5' 23496 EMBV3_08074 GATATCAGCATCCGAGTACTGTAGCCTGGGAAACCTCCGAACCACCTGAAATGCATGCTC Gene BVT0102_243844 + 0 NULL GK000021.2:24122014-24335502 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120806 1 XLOC_073272 Coding TCONS_00120806 XLOC_073272 Coding Coding MEX3B 21:24334088-24337608 = TSS90159 3019 1 TCONS_00120806_1 534 2 0.142654163114521 0.000196394369980414 0.000159733813237348 0.000306280205788821 3.85087806088609e-05 2.63839361633899e-05 9.48470405783664e-05 4.41288174992209e-05 8.09898695163105e-05 0.000569741479696729 4.26585902035997e-05 4.48131863586091e-05 0.000107221491851792 0.000261571424754185 0.000116111911449454 0.000420715699047224 0.000430812678787572 4.94934970493521e-05 8.40964734564002e-05 0.000171019091320036 8.81344147901198e-05 2.09432152973304e-06 0.000129459101393299 6.38141626427144e-05 0.000105507718956033 0.000444341609333581 0.000294083891578604 5.63105625092047e-05 2.66303340076507e-05 2.25122085506543e-05 4.12611013148064e-05 XM_001790240.2 MEX3B PREDICTED: Bos taurus mex-3 homolog B (C. elegans) (MEX3B), mRNA. 0.0 5124 100.00 0.940708843988076 NM_032246.4 MEX3B Homo sapiens mex-3 RNA binding family member B (MEX3B), mRNA. 0.0 3925 90.16 0.960582974494866 TCONS_00120806_1 sp|Q6ZN04|MEX3B_HUMAN MEX3B_HUMAN RNA-binding protein MEX3B; 0.0 773 94.13 0.923220973782772 4 coding 0 0 0 0 -0.0168938086665719 0.900485396878234 0.0149788122648823 0.774729908685245 ATGCGCAGTGCGCGCGACGAGCGGGCGGGCCCTTTAAGGCGAGCGCGGCGGAGCTCCCCCGCCCCTCCCGCGGCCCCGCCCCAACGGGAGGTGTGTGCTTGCGGCCCGGCGGCTCTTTGTTGTAAAATCAAAGCTCTGCGGGCAAAGACCAACACTTATATCAAGACCCCGGTTCGCGGGGAGGAGCCTGTCTTTGTTGTGACGGGCAGGAAGGAGGATGTGGCCATGGCCCGGAGGGAGATCATCTCTGCCGCCGAGCACTTCTCCATGATCCGCGCCTCGCGCAATAAGAACACGGCGCTAAACGGCGCAGTGCCTGGGCCGCCTAACCTGCCAGGGCAGACCACCATCCAGGTGCGCGTGCCCTATCGCGTGGTGGGGCTCGTGGTGGGGCCCAAAGGCGCCACGATCAAGCGCATCCAGCAGCAGACGCACACATACATCGTGACGCCCAGCCGCGACAAGGAGCCGGTGTTCGAGGTGACAGGCATGCCGGAGAACGTGGACCGCGCCCGCGAGGAGATTGAGGCCCACATCGCCCTGCGCACCGGTGGCATCATTGAGCTCACCGACGAGAACGATTTCCACGCCAACGGCACGGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGCCCAGGCAGCCTCTGGAGCAAGCCCACCCCCAGCATCACGCCCACTCCGGGCCGCAAGCCCTTCTCCAGCTACCGCAACGACAGCTCCAGCTCGCTCGGCAGCGCCTCCACAGACTCTTACTTCGGCGCGGGCACCAGCGGCAGCGCAGCCGCCACCCCGCGCCTGGCGGACTACAGCCCCCCAAGCCCAGCGCTCAGCTTTGCTCACAACGGAAACAACAACAACAACGGCAATGGATACACCTACGCGGCGGCGGCGGCGGCGGGGGGGGAGGCTTCGGTGCCTTCCCCTGACGGCTGCCCCGAGCTTCCGCCCGCCTTTGATCCGGCTCCCGCTCCGCCGCCCGGGGCGCCCCTTCTCTGGGCCCAGTTCGAGCGGTCCCCGGGAGGCGGACCTGCAGCTCCCGCGTCCTCTTCCTGCTCCTCCTCCGCATCTTCGTCCGCTGCTTCGTCCTCCTCGGTGGTCTTCCCCGGGGGCGGAGCCAGCGCGCCCTCCAGCGCCAACCTGGGGCTGCCGGTGCACCGCCGGCTGCACCCAGGCGCCAGCTGCCCGCGCCTGTCCCCGCCCTTGCACATGGCCCCGGGGGCGGGCGAGCACCACCTGGCTCGTCGTGTGCGCAGCGACCCAGGCGGAGGGGGCCTGGCCTACGCCGCCTATGCCAATGGGCTGGGGGCGCAGCTGCCGGCGGGCCTTCAGCCTTCGTCGTCGGACGCGTCCGGCTCCTCGTCCTCGTCCAGCTCGTCCTCCAGCTCGTCCTCTTCCTCCTCCTCCTCCTCCGGGTTGCGGCGTAAGGGCAGCCGCGATTGCTCCGTGTGCTTTGAGAGCGAAGTCATCGCCGCACTGGTGCCCTGCGGCCACAACCTCTTCTGCATGGAGTGCGCTAACCGCATCTGCGAGAAGAGCGAGCCCGAGTGCCCGGTCTGCCACACCGCGGTCACTCAGGCCATCCGCATCTTTTCCTGAAGGCAGCGCGCGCTTGCGCGCACCACAGGGCGAAGGAGGACCCCCCCCCCCCGCCCCCTTTCCTTCTGTCCTCACTCCCTGGCGACGCCTCTCTGCCTAACTCGAGGTGTCCCACCTTCTCCTCTCCGCCCTCCTGCTCACACTCTGAGATCCGAAGAGGAACTTGGAAAGCTGTAGTATCCGCTCATTTTTTTTTAATTTTAATTTTTAAACAAAGGAACTTGCCAGGATATCAGCATCCGAGTACTGTAGCCTGGGAAACCTCCGAACCACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAATGATAGTTTTTACACTGTACTTAATAGGAAGCTTCCAAAAGAAGAAAACCCCACAAGTTTTCCATTTTCTTAAAAGTAGGGAAAAAAATGAACAATAATTATTACGATGAAGAGGATAATAATAGTGCTATGGGATGTGTGTGGACTGTTTCTGTGTGTTCCCCTTTGTGGCTGGGTTCCTACCATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTAGAAGGGCCAGGAGTTCCTGTAATACCAGGATACTGCAGCTTTATTAAAGTTAAAGAAACTGTAACATATCTCTTATATATTAAAAAAAAAAACGTTTAAAAGTTTTAAAGAGAAATTGAATTAATACAGATTGAAGTATTTTATTCTTTTTTGACTTGAAAAATTATATTTCATATTGCAAAGATGTTTACAAGTATTTTAATTTAAGTTCAGTGAACTTTTTTGTAGCTGGGTTAAATCTTTTTATTTTAGTATGGCCTTATGGCAAAGAACACTGTATTATTTTTTAATAATCACACAATTGTGACAGAATTACAAACCATAAAATGTGTAATGTTTTGAACAGTATTCTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGAACTGCTTCACCCAGCATATTTTCTATTCAGTGATATAAAGCATATTTTATTCTATATTATTACAAAAAAACGGAAATGTATAAACATGTCAAAAGGAACTGTTGATGCTTTCTAACATTTGTATAAATAGAATTCAGTGCAAGTTACAAAAATTCTGTTGCACCACTATAGTTTTAGTATTTCTATTTTAATACATTTGTTTACCACTTGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACTGAGCAAAGTTTAAAAAAACAAAGTATATTTTATTTTATGATAAAGGGCCTTTAACCTCATGGTCAAATACTAATATTATATTTGCTGAGACAAGATTTGAAATTGTATCAAGAGTTTTATTTTTCTGACATTTAAAGTTCTACATAATAAAGGTAAAACTTAAGTAATGGTGCTACTTCATTTTTTAAGTATTTCTATATAAATAAAATATTGAAGAAAAGCT EMBV3_40727 GAAAAGGCGGTCGATCTCGTTCCCACACTCGTTCAAAATCCAGGTCTAGCTCAAAATCCC Gene GeneID:507801|SFRS12:XM_002696302:54_cdna Constitutive 0 NULL GeneID:507801 20 GENE SFRS12 NULL splicing factor, arginine/serine-rich 12 EMBV3_01860 AAATGAAGCTGATGAGGGTCTGGATCGTTAAGAAAAGGTACAGTACGAGGAGAGGCCGGC Gene BVT0101_036701 + 0 NULL GK000020.2:41550465-41564563 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00115107 TCONS_00115104 TCONS_00115103 TCONS_00115105 TCONS_00115106 1 XLOC_069435 Coding TCONS_00115103 XLOC_069435 Coding Coding PDZD2 20:41561816-41617981 j TSS85683 9765 1 TCONS_00115103_12 2329 20 0.826490278470194 2.09623715754927e-09 3.03717318699021e-17 4.39717897816488e-08 1.20715901463644e-08 2.04643297910923e-09 5.22338058656011e-19 8.58885762289378e-43 2.29652601408806e-11 2.95936358192274e-09 0.00022009803235412 4.5869388118867e-05 4.39223667752088e-05 1.92847617472943e-12 6.00772644459181e-05 8.05457268029105e-05 0.000784844387923351 0.000612063480060759 0.000253394791625794 1.72354344348893e-05 3.02696819212717e-05 0.000109683070856495 0.000129925282134884 0.000409507194370036 0.000329572558414671 5.14764906896156e-05 1.51630683385876e-07 4.07021402534574e-10 6.38916487975103e-05 3.28867874390779e-05 7.66504061488734e-05 XM_002696404.3 PDZD2 PREDICTED: Bos taurus PDZ domain containing 2 (PDZD2), mRNA. 0.0 1.734e+04 99.81 0.986687147977471 XM_005248270.1 PDZD2 PREDICTED: Homo sapiens PDZ domain containing 2 (PDZD2), transcript 0.0 5923 74.85 0.878238607270865 TCONS_00115103_12 sp|O15018|PDZD2_HUMAN PDZD2_HUMAN PDZ domain-containing protein 2; 0.0 2931 67.64 0.997423787033061 0 coding 0 0 0 0 0.0566131460655618 0.638350457129475 0.0540866009261235 0.488692236260688 CCTGTACTGCTGCTCTTTGAGCCTTGAGATGCCTGGAACAGAGGAGCCCCATGATGCATGCGGCCCCGAGGAATCCAAGGGGAACTTGGAAAGTCCCAAACAAGGCAGCAGTAAGATGAAGCTCAAGAGTCGCCTGTCAGGTGGTGTACACCGTCTAGAGTCTGTTGAAGAATATAATGAACTGATGGTGCGACATGGTGACCCCCGGGCCAGGATGTTAGAGGTCTCCCGAGATGGCCGGAAGCATTCCCTTCCCCAGCTCCTGGACTCGACGGGCACATCACAGGAATACCACATTGTGAAGAAGTCCACTCGCTCACTAAGCACAACTCAGGTGGAATCTCCGTGGAGACTCATCCGGCCGTCAGTCATCTCCATCATTGGGCTGTACAAAGAAAAGGGCAAGGGCCTTGGCTTTAGCATTGCTGGAGGTCGAGACTGCATTCGAGGACAGATGGGGATTTTTGTCAAGACCATTTTCCCAAATGGATCGGCTGCAGAGGATGGAAGACTTAAAGAAGGGGATGAAATCCTAGATGTAAATGGAATACCAATCAAGGGCTTGACATTTCAAGAAGCCATTCATACCTTTAAGCAAATCCGGAGTGGATTGTTTGTCTTAACGGTACGCACCAAGTTACTGAGCCCGAGTCTCACGCCCTGCTCCACACCCACACACATGAGCAGATCAAGCTCCCCAAACTTCAATGCCAGCGGGGGAACCTCAGCAGGGGGCAGTGATGAAGGCAGTTCGTCCCTGGGTCGGAAGGCCCCCGGGCCCAAGGACAGAATCGTCATGGAAGTAACCCTCAACAAAGAGCCCAGAGTTGGCTTAGGCATCGGTGCCTGCTGCCTGGCCCTAGAAAACAGCCCTCCTGGCATCTACATCCACAGCCTTGCCCCAGGATCAGTGGCCAAGATGGAGAGCAATCTGAGCCGCGGAGATCAAATCCTGGAAGTGAACTCTGTCAACGTCCGCCATGCTGCTTTAAGCAAAGTCCACTCCATCTTGAGCAAATGCCCCCCAGGACCCGTTCGCCTGGTCATCGGCCGGCACCCTAATCCAAAGGTTTCCGAGCAGGAAATGGATGAAGTGATAGCACGCAGCACTTATCAGGAAAGCAAAGAGGCCAGTTCCTCTCCTGGCTTAGGTACCCCCTTGAAGAGTCCTTCTTTTGCAAAAAAGGACTCCCTGATTTCTGAATCTGAACTCTCCCAGTACTTTGCTCACGACGCCCCAGGCCCGCTGTCCGACTTCATGGTGGCCGGCTCCGAGGACGAGGACCCTCCAGGGAGCGGCGGCAGCAGCAGCTCCGTGGAGCCCCCCAGCACCTCCCCTCACAAGGAGCCAGGAAAAGCCAGGGCCAACAGCCTTGTGTCTCTTGGAAGCCAACGGGCCTCTGGGCTCTTCCACAAGCAGGTGACAATTGCCAGGCAAGCCAGTCTTCCCGGGAGCCCAGAGGTCCTCCGGAACCCCCTCCTCCGCCAGAGGAGGGTGGGCTGCTCTGATGACGATGCCAGCGACGAGGAAGAGTTTGATGGCGAAGGCGACTGTATTTCCCTCCCAGGGACCCTCTCAGGTCCCAGTAGGCCGCTGACAGAGGACAACTCTACACATGTTTCAACAGCCTCTTCCAAGGTCACAGGTATCAACCGAGAGGAACACCCCAAGAAAACACTGGTCAGCAAGGCCTCCTCAGTGCCTCTCCTCGGCAGCTCGCTGGACTTCCAGGAGAGCCTCCCAGGAGGCGTGCGGGACCCCCTTTCCCATGCAGCCAGCCTGCTGGTCCCATCGGAGGCCCCCAAGGGTAGCCCTGGCTGCTCGGGGAGGAAGGAACTGTCAGGATCGAGGAGCTCGCCCAAACTGGAGTGCAGAGCCGGGACAGGCACCCAGGGTCCAGCGAGCACAGACAGCCCCAGTTCCCTCCAGCAAAATGACAGCCTGGGGTCCAGGCACAAGCCCGTGGCCAGGGTCAGCCCACACCGCAAGAGGCCTGAGGCTGAGGCCAGGCCTAGCAGCGCAGAATCAGCACAGCTGACCGATGGAGCCAGTGACCCACGCGGTGCGGACTTGAAAGTCCAGGATAGTTCCATCCAAGTGACCGTGACTGGTTATCGGCCAGGAGGAACTGTGGAGAAGGAATCTCTGGACAAGCCGTCCGTCGGGGATGGACGAGTCCCCACTGAGTGGGGACCAGGCGGTGCCCTGCCCCACCCAGATGCCAGCCACCCTACAGAGAACCCACCTGCAGCGACATCCAAGCAACCCGGGACAGACCCTCTCCCTTCCCCAGGGCAGAAGGAGGCGGCTCACCCTGACCCCAGCCAGACCTCAGTGGACACAGAGCCAGCGAGGCGACCTGAGGACCCCGGAGGGCCAGAATCACCCAGGATCCCCAAGTCTGAGGACAGCACATCCCCGGGGACAATGGCAATGGCTCGTCCTGACCTCCGTGAGATGAGAGCAGCTCCCAACGCCAGCTCGCCCTGTGCTGCCCGGAAGGCAGCGACCCCCAGGGGAGCAGGACCCATGGCTGAGGGGGCACCTTCGACTGGTGCTGGGCTGCCACAAGACCTCATGTCCGGGGAGAAGAGCCAAGAGAGGGTTCTGGGTCACCATGCCAAGGCTCCACAAACCTCAGCAGTCCTTGCCCCTGAAAACTGCCAGGGGTCAGCTCTGCCCCAGGGAACAGACTCAGGGTCTACCAGCGCCCCGCAGGCTGGCCTGGCCCTGCCATCGCTGAGTGACAAGGCCCAGGAGGCGTGTGGGGGTGCCTCGGGGCCCGGCTGCCCTGGAGGGAACGGGCGCTGCCCAGTGACAGACATCGACAGGCTCCTGGTGGAACCGGATGTCTCCGGAGCAAGACTTCCCTCCCCTGGGAAAGGGGACCGGCTGAGCAGAGAGCAGGCTGCCCAGGGGCCACAGCTAGCCTCGGGGAGTCCAACCCCTGCCCCAAGGAGGCCCGGGGCGGCTGGTCCAGCCCCTCCCCCTCAGTGGGCCGGCCAGCCTTCAGTTTTGGATTCCATCAATCCCGACAGACATTTTACTGTGAACAAAAGCTTTCTGAGCAACTACTCTAGGAATCTCAGCAGTCTCCACGAAGACAGCACCTCGCTGTCAGGCCTGGGCGACAGCACCGAGCCATCTGTGTCCCTCTCGTCCATGTACGGGGATGTGGAAGACTCATCCTCAGACCCCGAGTCATTCACTGAAGCCCCGCGAGCTCCCCCCCGGGACAGCTGGTCCCCTCCTCATCCTCGTCCTCCTGAGCCTTCTCACAAGGGAGACGCAACGGAGTCCGAGGAGGAGCAGGTGGAAATCTGTTCCACGGATGGCTCCCCCGATCGGCCCTCAGCCACTGCCCTTGCTCCTGCCCGGGTGGCCGCTTGCCCTGCCCTTGCCACAGCCCTGCCACCAAAGGATGGAGCCCTGAGCCAGGTGGGGGCAGAAGCAGGCCACACAGCCCGCTTCGTGCCAGGCACCTCCACCCCTCCGCAGCCACCTCCTCCTCTGTCAGACGTGAGCTCTCAGGAGGCGGAGCCGCCTGAGGATGCAAGGGTCTCTCAAGACCACAGGTCCCCGAGTGAAGAGGACTCTGGGGAAGCCACCCAGCCTCCTCCGGGTACCAGGCCTATCCCCAGCTCCCTGGGTACCCTTGGTTCTCCTAACGTGGTGAATGGTTTGGAGTATGACCATTTGGATGACAAGGCCCCACCTGAGAAACAAGAAATAGATGTTCACACTGCTGAAAACCAAGCCTCCTTCAGGGCGTGTGTCCCCAAGAATGGAGACTCAGCTCTGGGAAACCTGCACATCTCCGGAGGTCAAGGCCCAGAGGACTTGTTGCCAAAGCCAAAAGCCATCTCCAGGCGGCCCCTCATGGCCTGGTTTAGAGAGATAAATAAGAACAACCACGGGACGCATCCGCAGAGCAAAACTGAAATGGAACAATCCACGCTGCTGGCCAGAAGTCCCGACCCCAAGGCCCAGGTGCTGAGCTCAAGCCACAAGAAGGGGGTGCCTGTGCCAGATAGCCCCCCTCCTCGGCTGAATCTGGAGAATAAAGACTTGCCTAGGAAAAGTTCTGTGGAAACCCTTTTGAGTAACTGTCAGAAACCCAAAGCTGGTCCTAAGCTGAAGAGACTGAGCATCAAAAGCAAAAGCAAAGTCAGTTCCGAGGTCCCGGCTGCTCACACGGGGAAGACTGGCAGCACAGAGCACAGGAAGGCCCTTGTCTCACCCCAGGCTTCCCACAAAATGCTTTCTAAGGTGGCGTCGCACCGGTTCCACACAGCTGACCACGAAGAACTGGACAAGACTGCCGCAGCCGCCCCTCAGTCTCCCCAGTGTGTGGAGGGCAAGCTGCCCCCTGGGACCCCGGGCTCCCTGAAGCCCTCGGCATCCGACTCGAGCATCAGGATGTTTGTTTCGCCCGTGACCACCCCCAAGACCCTTCCTGAGCAAGGTGGGTGTGGTAGGCTCCACCCGGCTGTGCACGCGGAACCCGACCGAGGCTTCCCGGCTGCCCCTAGCCCTCCCAAGTGTGGTCCAGAGAGCAGGGCTCCCCTGGCATCCCCGGGGCCAGCAAGTCCCGCAGCACTGAGGAGTGGCACGTCCACGGTAGCCGGCAAGCTGGAGGTCCCCACTCCCGGGCAGGGTGAGTGGTCCCTGTCCAGCCAAACAGACTCTGCAGCAGAAGCAGCCCTGCCAGGGGTGACTGGTGACAAAAGAAGCAAAATAATTGCCAGTGAGCCTCTTGAAAGAACCAAGCAGCTGAAAATCATTGAGATCCCAAAGAGCACATGTGGTGACATACTGGCTGAGAGGGACAGGCAGGGGGGGCTCTTGTCCCAGAGCAGCCATCAGGAGGAGAGTGAGGCTGGGCTCTGTCACCAGCCAGGGGAGTCCTCCCCAAACCACCCGTCCTTCCTCCCAACCCGGGTCTCCCAGGTGGAGCTGGAAGCGCAGCAGCGATCCGTCAGCCTGGCAAGACTCTCCTCCTCTTCCTCCCCGCAGCTGCTGGCTAGAAAGGCCGATCCTGGCCAGATGGGCAACCCCCTGGGGGTGCCCAGGAATGGCCCACCAGTGGGCCCAGTGCTGGACGATCATCCCTACTTCACGCCAAGGCCAGCGACCAGGACCTACTCCATGCCGGCCCAGTTCTCCAGTCATTTCGGCCGAGAGGGCCATACCCCACAGAGCCCAGGGCGCACCCCTCGGGACGGCCAGATCCCTGGCACCAGCGGGGGCCTCCTCGAGGCCAAGGCGTCTAGAGGTGCTGTTCTCAGCCTGGCTAATGGGCAGGGTGTATACAGCGTAAAGCCCTTGCTGGAGACTTCGGGGAACCTTCCGACGACAGACGAAGCGGATGTCCTGTCCGCCCAGGAAACCAGCTGCCAGCTCACAGACAGAGTCACCGTCACCAGGAGACATCACTACTCCCCACAGAACTGGCCCCACGAAGCCACCTCCTTTTTCTCTGTGAAGCAGAGGATCAAGTCTTTCGAGAACCTGGCCCACTCTGACCGGCCCGCAGCCAAGGCTGGGGCCTCCTCCTTCTTGTCAGTGAGCTCCAAGCCTCCCATTGGGAGACGGTCGTCCGGCAGCGTGGTTTCTGGGCCCCTCAGCCACTCCAGTGACCCAACAGCAAGGTTGCTGAGACGTAGCCTGAGTTCCTGCAGCGAAAGCCAAGGTGAAGCCACCACCGTCGTCCCCCCGATGACCAAGTCCCCGTCCAGCATGACGCTGACCGTCTCCCGGCAGACCCCAGCAGATGCCCGTAACAAGGGCGCTGACTCAGACCCCAAGAGACCACCTGGTCCTTCGGGCATCCCTGCCCCGACCGCAACCCCCGCCTCTCCCGCCAAGAGGAACAAGTCCTCGGTGCGTCACACGCAGGCCTCACCTCTGTCCCGCTCGAAGCTCCAGGAGCTGAGAGCCCTGAGCATGCCCGACTTGGACAAGCTCTGCAGCGAGGACTTCTCGGCAGGGCCATCCGCCGTGCTCTTCAAAACTGAGCTGGAAATCGTCCCCCGGAGGTCACGTGGCTCCCCTGCTGGGGGCCTCGCTGGGTCCACGGCCCTTTCATGCCCCAAGGATGGGGCAGAAAGGGCCTGTCCCAAAGCCACTGACCCCAGAGCACCCAGTTCAGCCCACGATGTGGGTGAGACCGCCCAGGATCTGCCTTCCGGAAGAAGTTGGTCAGTTAATTTGCAACAACTCCTGGTCTCAGCAGGGGATCAGCAAAGACTGCAGTCCATTCTGTCGTCAGTGGGGTCAAGATCTACTGTCCTCACTCTCATTCAGGAAGCGAAAGCACAATCAGAGAACAAAGAAGATATTTGCTTCATAGTCTTGAATAAAAAAGAAGGCTCAGGTCTGGGATTCAGTGTGGCAGGAGGGACAGATGTGCAGCCAAAATCAATTGTGGTCCACAGGGTGTTTTCTCAGGGGGCGGCTTCTCAGGAAGGGACTGTGAGCCGAGGGGATTTCCTGCTGTCCCTCAACGGTGCCTCACTGGCTGGCTTAGCCCACGGGGACGTGCTGAAGGCTCTGCACCAGGCACAGTTGCACAAAGATGTCCTCATGGTCATCAAGAAAGGGAGTGATCAGCCCAGGCCCTCCAGCCGGCAGGAGCCTCCCACAGCCAACGGGAAGGGCTTGGTGTCCAGAAAGACCAGCCCCCTGGAGCCTGGAACAGGGAGAAGCACGGCTGCGCACGAGGCTCTGTGTGTTGAAGTGCTGAAGACCTCGGCTGGGCTGGGCCTGAGTCTGGATGGAGGGAAGTCATCCATGTCTGGAGATGGGCCCCTGCTCGTCAAAAGAGTGTACAAAGGTGGTGCAGCTGAGCAAGCAGGAACAATAGAAGCTGGAGATGAAATCCTTGCCATTAACGGGAAATCTCTAGTGGGGCTGATGCATTTCGATGCCTGGAATATCATGAAGGCTGTCCCAGAGGGACCTGTGCAGTTAGTAATTAGAAAGCACAGGAATTCTTCATGCAGCAAGCACTGGTAGTGGCACTAACAGTGCTTGTTACTTTTTTTTTTTTTTAACCTGGAATCTCCTTTTCTCAATTCCTTTCTTCGGCAAATCAGAATGACTTCTCTAAACCATGGGCTCCTGAAACAACAGAGCAGCACTGGTGCAGGGAAGACTATCAAACTCCCCAGCTTTTTTTGCTCACACGTGAAGCAGCAGCCATGGAGCTGAAATCCTAAGCCTTCTGCCTGGATCACTTAGGCTGGGAGGGTCCACTTCGTTCCAGTGCCTGTCCCCTCCTGTCATGTTTCCTAATGGGGACACAGGATGTGGCATGCCCTTCTTTACTTGAAACATTTAGTGAGACCTCCAAATCCTTCCTCCCACCTATCCCAACATAGTCAATCCTGGCAATTAGGGATCTAACAAAGTCTGAGGGCAACACAACTGTCACAACTAAAAGGACTAGTTTTATATAATTTTGTAAGTAAATGACAGAATGCTTTTAGGCACATTCAGTGGAAGGAGCTAAGGGTCTGTTATCCTGAGAAGAAAAACATGACCCTTGAACAAAGAGAATCAGTTATGACCTAATGGTTAGGTTGGCTCAGGAATTATCCAAAAATGAAAAAGCAAAATACAGAAAGTGGTATTTTAGTGAGTGTAATGTGCAACATATGGCTGCATAGTTTAATTGGTGGTTATTGATCACCATGAAGTATTGATCATGATCTAAAGTGTACGTCGTAAGGCAATTTTACAGGAATGCAGTTTGGATAAACTGTACTAAATAGCCATGAACTTCGCTGCTTAGAATGAGCAGAAAGTTCCAGCTCTGAAAGCACCTTACATCCAGTTTGAAACTTGTCTTGAATAAATGCTGAAATTCAAGACTGGTCAATGAAAGAGCAGGCAAAAATACCATTGTCACTGAGTTTCCATTTTTATATTTTATGTACTCTCCAACCACTAATTTAAGCTAAATTTTTAGAAATCAATTATCTTTTTTAGTATCCTTGGATTGTAATCCAAGTAGAGGAGCTTAAAATAATCCTTTTAGAGGACTTTTTTTTTTTAACTTTTTTCCCCTTTCTCAATAAGCTTAAGAAATGTAACATTTCTAACCATTGGATCAATTTTCCTGACCTTGACCTGAGTAATGACATAGCTCTGCAGTGACTGAAGTTTTTGCTCTTTTTGTTTTGCTGTTTTGCAAATTCTCTTTTGCCACAAATGTTTCCCAGCAGAACACAGTTGTGACTCACGCTTGCTTGTGACACTCATTCCAGCTGCTCTTCCTTCTGAAGCACCAGCTTCTTTGTAGTAACTGTTTCCATTCGATGTTGCTGTTCCTGGTCACCAAAAGGGCCGGCCTCTCCTCGTACTGTACCTTTTCTTAACGATCCAGACCCTCATCAGCTTCATTTACTAAAATGTAATCAGAAGATGGAGAACGAGGGGGAGTCAGTCTTTCAAGGTAAAGGGGCAGAATTGGGTGGTCACAGGCCACGTGCTCAGGTGGCACAAACCAGCTTACTGAGTGCTGAGAATACGGGTGAAGCTGCATACCTGCATGCATGGTGACGCCAAGGTTTTATGTGGGCGATTTCTTTAATTAACCTATTTCTGAGTGACTGATCCCAGTAAACCTCTGTGGTGCTGGCCCAGGGAGGTTCTCAGATGGGATTGAGTTATCTGGCTGGTGTGAGCCCAGATTCCTCATTTTTAAACAGGTTATACAAAAGGGAATGTAGTTCACGAGTTTGCTAGAAAGACCTGATTAATTTAGCTTCTACTTTTCACTACTACAGTTCCAGGTAGGATACTATAGGAAGTCAGTGCAAGGTGCATGCTAGATTGTTTTTAAGTCTCTGGGGTCAGATTTGTGGCTTCTGCTTTCTTGCCTAAATGAGAGATGATTTGAAGTCCACGCTGAAAATTTTTCGTCTCTACTCTTCTAGCTGTGCCTGCATAGAAATGCACAGTCCGTGTGACAGGAGCTTCTGAAGCAACGAAACAGTCTCTCCTTGAAAGAGTTCCTAACCCTCGTAACTAAAAAGTGTGAGGGCAGCCCTCTGGTTCACTGAACCATATTCAAGTCATCAGCTGTTTCTAGTGGACCTCACCAGAAGGCTCCCCTTGGAATTCGACAATTAGAATTTGAGGAAGCAAAAGCTAAACTTTGACCCTAAGATAGAAAGATATTTACTTGTTGTCAGTGTCCAAGGCATGACTTGTATTTCTAATTAGTCTAATAAATTCCCACACTTCCTGATGTGAACACTAATGGTAATGTCCTACTAAAACTTCCATTGTTTTGGTTTTTTTAGCTGGTCAGTCATCCAATAAGCTATGATGGTAATTTTGTTACAGTGTGTATATCGTAGTTGCCAAGGATATACCGTGAAGGTTGAAGTAAGTTGGGTTTCATTTCTATCCTCCCATACACAGTTCATTTAATTTTAGGGTTGACTTAATTGGCACCACACCTGTTGTATGATATTATACATTATCCTTTATTTATGTAAAATAAAATGCCTTATATATTATGAAAGAGTAAGTGCAATAATACAAAATAGCCTGTACATTTTTAAAATGTTGTCGCCAAGTTATGTAAATCCACATCTCTATAAACAACCTTTTTAAAGTAATTTTAAGAAAATAAACACTGTTTACTACTTGTTTGTGTTTTTAGTTTTGCATCTATAGAATAACATTTTACAACATGAAGATAAATACGGATAACCTGAATGGGTAAGAGGAACAGGCAAAAGAAGTCAAAT EMBV3_27959 CCTCGATCCCCAAATAGTTCCTCGGTACTTCAACTGTTAAGAATGGGGACAAGAGTCCTG Gene BVV0102_263126 - 1 EMBV3_06316 GK000003.2:20824140-20825191 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35746 TACACTAAGTCATAAACGAGGGAGGTATCCGGCATGAGTTTAGGGGAGAAGGGGAGACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29900 CCTGAGGAATGTTCGAGCCAATCTCACTACAAAGACGGTGGCCTTGTCACACGATAAAGA Gene GeneID:616153|LOC616153:NM_001099391:120_cdna Constitutive 0 NULL GeneID:616153 16 GENE LOC616153 NULL hypothetical LOC616153 EMBV3_15209 TTGTTGAAAAATAAGATGTGTTGCAGTTTTGCATGTAACGGGTGATGCCTTTATGGGACT Gene GeneID:524460|B4GALT6:XM_002697686:193_cdna Constitutive 0 NULL GeneID:524460 24 GENE B4GALT6 NULL UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 EMBV3_10758 CACGGGAGATGTGTCGAGTTGGCCTCTACCATGATGACTCAAAACTTTGTTCTTAACCAC Gene GeneID:100125922|RER1:NM_001105492:2_cdna Constitutive 1 NULL GeneID:100125922 16 GENE RER1 MGC159658 MGC179436 RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) EMBV3_22018 CTGCGCTGCCATTAAGCAATTGAAGGGGCCGGTGAGCGATCAGGAGAAATTGTTGGTGTA Gene GeneID:353112|ELP2P:NM_178322:46_cdna Constitutive 0 NULL GeneID:353112 19 GENE ELP2P DBIL5 ELP endozepine-like peptide 2 pseudogene EMBV3_22080 GGAGTGGAGACCCTTTTGCAGAGCTCTTTGATTTCTCCTCCTCGTCTTTCTCCTTCAGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43423 ACCTACAGCCCAGGGCTGCACCCTTGCTCATAGGCAGGACTCTGGGTCAGATGGCAATAA Gene GeneID:616425|SUPT4H1:NM_001034792:66_cdna Constitutive 1 NULL GeneID:616425 19 GENE SUPT4H1 MGC127279 suppressor of Ty 4 homolog 1 (S. cerevisiae) EMBV3_20953 TCAGGGTTCACGGTCCCATCCCCATGACCCTCGCTGCCGTTATTCAATTCTAATCACCTA Gene BVV0102_177162 + 0 NULL GK000001.2:82987710-83090389 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29030 AGGCATAGTGTTCCAACCACTGTCTTAATACATCATCTTTATCATTTGGAGCCAAAAGGG Gene BVV0102_038588 + 0 NULL GK000015.2:8222808-8264471 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060535 TCONS_00060538 TCONS_00060534 TCONS_00060530 TCONS_00060531 TCONS_00060537 TCONS_00060532 TCONS_00060533 TCONS_00060536 1 XLOC_036764 Coding TCONS_00060536 XLOC_036764 Coding Coding ARHGAP42 15:8259092-8607759 j TSS45250 8579 1 TCONS_00060536_5 820 0.067606947196643 25 0.975466492287748 5.61565088737776e-62 2.04211749594184e-23 3.00345286936441e-63 4.59637903460773e-08 1.49652075895315e-26 7.00170589611284e-52 9.62733734402472e-18 3.00065225951556e-07 3.22978710872878e-26 0.000110579508140642 3.26007914771543e-19 4.0897171130896e-41 9.03611697956979e-44 4.43611893917023e-05 2.96386188720039e-75 0.000208116244386806 0.00166546356804709 0.00174499812692758 4.21819453934299e-05 1.09513789792219e-13 3.50699660235537e-57 0.0013027932317918 0.000622651941325294 0.00135807888127753 7.45941508509897e-77 3.62035505065065e-10 4.92909696629444e-18 9.27485840607825e-34 5.2155466111029e-07 6.38475876157308e-05 XM_003586932.2 ARHGAP42 PREDICTED: Bos taurus Rho GTPase activating protein 42 (ARHGAP42), 0.0 1.386e+04 100.00 0.895675486653456 NM_152432.2 ARHGAP42 Homo sapiens Rho GTPase activating protein 42 (ARHGAP42), mRNA. 0.0 3927 87.88 0.365776897074251 TCONS_00060536_5 sp|A6NI28|RHG42_HUMAN RHG42_HUMAN Rho GTPase-activating protein 42; 0.0 1621 97.68 0.998780487804878 2 coding 0 0 1 0 -0.0288792307681753 0.855740414156258 0.0171150979058843 0.77456172724983 GTGCCCGTCTTGACCGCCGGCCCCGACGCGTTCCCGGCGGCCGTCGGCCGTGCCGCTGCCATGGGGCTGCCGACCCTGGAGTTCAGCGACTCCTACTTGGACAGCCCGGATTTCAGGGAGCGCCTGCAGTGTCACGAGATTGAGCTGGAGCGAACCAACAAGTTCATCAAGGAGCTTATTAAGGACGGCTCCCTGCTCATCGGGGCGCTGAGGAGTTGAACTCCAGGAGACAGATCTAACCCAATTCTTATTTAATTTTGACTTTGGATCCCAAGATCTGTCTATGGCAGTACAGAAATTTTCCCAGTCGCTGCAGGATTTCCAGTTCGAATGTATCGGTGATGCTGAAACAGATGATGAAATTAGTATCGCTCAGTCACTAAAAGAATTCGCAAGACTACTCATCGCAGTAGAAGAGGAAAGGAGAAGACTGATTCAAAATGCTAATGATGTATTAATTGCACCACTTGAGAAATTTCGCAAAGAACAAATAGGTGCAGCAAAAGACGGAAAGAAGAAATTCGACAAAGAGAGTGAAAAATACTATTCCATTCTTGACAAACATTTAAATTTGTCTGCAAAGAAAAAGGAATCTCATTTGCAAGAGGCAGATACACAGGTTGACCGAGAACATCAGAACTTCTATGAGTCATCACTAGAATACGTCTTTAAAATTCAAGAGGTTCAGGAAAAAAAGAAGTTTGAATTTGTCGAACCGCTTTTATCATTCCTCCAGGGTTTATTTACTTTTTACCACGAGGGATATGAACTCGCCCAGGAATTTGCACCATATAAACAACAGCTGCAGTTCAACTTGCAGAATACGAGGAATAATTTTGAAAGTACTCGACAAGAGGTAGAGCGATTGATGCAGAGGATGAAATCTGCCAATCAAGATTACAGGCCACCCAGCCAGTGGACAATGGAAGGCTACTTGTATGTCCAGGAGAAACGACCTCTTGGTTTTACATGGATTAAACATTATTGTACATATGATAAAGGAAGTAAAACTTTTACAATGAGTGTTTCAGAAATGAAGTCCAGTGGGAAAATGAATGGCCTTGTTACTAGCTCACCAGAAATGTTTAAATTAAAATCTTGTATCCGACGAAAGACAGATTCAATTGATAAACGATTCTGCTTTGACATAGAAGTGGTTGAAAGGCATGGGATCATCACATTGCAAGCCTTTTCAGAAGCTAATCGAAAACTCTGGCTTGAAGCCATGGATGGAAAGGAACCGATTTATACCCTGCCTGCAATTATTAGCAAGAAAGAAGAAATGTACTTAAATGAAGCAGGGTTCAACTTCGTGAGAAAATGCATCCAAGCTGTGGAAACGAGAGGCATCACCATTTTAGGTCTCTACCGAATAGGAGGAGTGAATTCCAAAGTGCAGAAACTCATGAATACCACATTTTCTCCCAAGTCCCCCCCTGACATGGACATTGATATTGAACTGTGGGATAATAAGACAATAACAAGTGGACTGAAAAACTACCTCAGGTGCCTTGCAGAACCACTGATGACTTACAAATTACACAAAGATTTTATTGTTGCTGTTAAGTCTGATGACCAGAACTACCGGGTGGAGGCTGTACACGCACTGGTGCACAAGCTGCCCGAGAAAAACAGAGAGATGCTGGACATCTTGATAAAGCACCTGGTCAAAGTGTCCCTACATAGTCAACAAAATCTCATGACGGTCTCAAACCTTGGTGTTATATTTGGTCCGACTCTAATGAGAGCACAGGAAGAAACTGTGGCTGCCATGATGAATATTAAGTTTCAGAACATTGTGGTTGAAATTCTGATAGAGCACTATGAAAAGATTTTTCACACTGCCCCAGACCCCAGCATCCCTCTTCCTCAGCCTCAGTCTCGATCCGGATCCCGGAGGACGCGTGCAATCTGCCTCTCCTCTGGCTCCCGGAAGCCCAGGGGGAGGTATACTCCGTGTTTGGCAGAACCCGACAGCGATTCCTACAGCAGCAGCCCTGACAGCACACCCATGGGGAGCATCGAGTCCCTCTCCTCTCACTCCTCTGAGCAGAACAGCACCACGAAGCCTGCCTCCTGCCAGCCCAGGGAGAAGTCCACCGGGATCCCTTGGATTGCGTCCCCATCGCCCAGCAACGGACAGAAGAGTCTTGGTCTCTGGACCACGAGTCCCGAGTCAAGTTCTCGAGAAGATGCAACCAAAACGGACGCAGAATCAGACTGCCAGAGCGTCACCTCCGTCACCAGTCCCGGGGACGCGTCTCCACCCATCGACCTGGCCAAGAAGGGGCCCTATGGGCTCTCAGGACTGAAAAGAGCCTCGGCTTCCTCCCTCAGATCCGTCTCTGCAGCCGAAGGAAACAAGAGCTACAGTGGATCCATTCAAAGCTTAACTTCCATAGGTTCCAAAGAGACACCCAAAGCCGCACCAAACCCAGATCTGCCTCCAAAAATGTGCAGGAGGTTAAGGCTGGACACCGCCTCCAGCAACGGCTACCAGCGCCCCGGCTCCGTTGTGGCAGCAAAGGCCCAACTGTTTGAAAACGTTGGTTCAGTTAAGCCAGTTTCTTCTGGGCGCCAAGCCAAAGCCATGTACTCCTGTAAAGCAGAGCACAGCCATGAGCTTTCCTTCCCACAGGGGGCGCTATTCTCCAATGTGTACCCATCAGTGGAACCAGGATGGTTGAAGGCAACTTATGAAGGCAAAACAGGACTCGTCCCAGAAAATTATGTTGTCTTCCTCTAATGCTATTTAGTGGACGGCAGTATCTTCATGGTATCCATGGTAACAAGTAATAAGTGATATGATTTTATCTGACACAGATATGAGGATCAGCCCATTAAAATGAAAAATAATCCATTTCTAGACAGTTTCCAAAGCAGACTATGTACCTCTATTAACGGAAAGGGAAAAAATGTTTAAATTGTTTGCCATTCTTTTTATCTTGGGCTGATTTCTTATTTTGAAATAGCTTATCCCCATCCCTTGCTTTTTTTTTTTTTTAATAAGTAACTCTCCACAATGTTTCTCATAACATTTATAAAAATCTCAAATACTGTGTTAAGTACTATATCCCAGAAATTTGGAAACCAGAAATCTGCTATAAGACTTTAAGACCTGCCCTTTACTGTCTGGTATTTTCTGAGAAACCTTGAAATCATTGCTAAAAAAATGTAATTTAAACTGTTCATTTATTATTTTTTCTTAAAAATATAGTGCTTTTATATATGATTGTTTTGCTGGTCCTAAACATTTCAAGGAAATAAGGGTTTTTTTTTAACATAAGTTTATTTTTATTTGTTTACCAAGTAGATGATAATATTCAAAAGCAATAACATATATGGTGTCTGTAAATGAAACCAAGTTAAGTCATGCACTGATTCCGCTGTAAACACTCTGTCCAACGTTCCAGATGCCGTCTATGGGCTTAGAGCAGGGATCAGCAGACTACTTCTGCAGAAGCTTGATAGTGAATATTTGGGGCTTGGCAGGACCTGTTGTCTCCATCACACTGTCCATACTACCACTGTAGCGGAAAGCAGTCACAGACAACACGTGAATGGGTGTGACTGTGTACCAATACAGCTTTCTTTCAGGACACTGAGATCTGAAATTGTGAATCTGTCATGCCATAAGATATTAAGCTTCTTTGACTTTTAAAAAATCATTTAAAAATAGAAATTTATAGCTGATGTGCCACACAAAAGCAGGTGGCAAGCCGGATTTGCCTTATGGGTCATGGTTTGCTGATCACTGGTTTGGAGGATGTTTAAAACTGTCTGTATTACTTTGAGATTTTATGAAATTTTATTCCATTAACATATAAATACTGACAAGTGATATGCACATATCCTCTGCTAGAATCATTATAATGGTATCACAAATGTATAATTACAATAATAGGAAAATGATACAGCTTAAATTCTACTTGTTATTCTGTAAAGTGTCCAAGGATTTTATTGATACCCTTTTGGCTCCAAATGATAAAGATGATGTATTAAGACAGTGGTTGGAACACTATGCCTTCTAAAGTCTATGATTAGTTGAGCCATAATCTTAACATAAAGGTACAGGATCCTTAAATTATTTTGAAATTATTTCATCATCTTTAGCAGGAATAAAATCATATATAATTTTCCATTATGCCTTTCGATTTACAGCCTTTAATAGAAATTTCACTGTATTTATAGAGCATAGAGATAGGTATTTACTGTCCATTTATATATGCCATAATTATCTGGTCATATGTTGACCACTTCTTCTATTATTTCTATTTAATAATCCTCATATTATTTCTAACATATCTGCATGTGGCAAAGAGCCTTTCTTCTCAAGATTCCCAAAAACTGGTTCTCCGCCATTGATTGCCACAGCACTGACCCCCTTGGCCACAGTATTGTACATGCTACTTCAAAGTTCTTCACTGTATAGACACTCAGGTATTGACTATAACAGTTCTTTTTACATGATATTGATTTGTAATCGCCATCTCTTCTACTTTAAGTTAATGTTTCTAGAGTTAATAGGTTAAATTATATACATACACATACACAACTATGCCTTGGAGCATTTATGCTTTTAAAATTTTAAATGGAATAGTGGATTAGGATTTAAAGGTAAAGAGAATAACAGTAGGCAGAATTACAACCGGAAATAAATATCAGCATGGAAATAAAGAAGTTGAAAATATTTAATGTTGTAAAAATTAGTAATATAATGAAAAAATCTGGTACATTTGTCTCCTTTTTTTTTTTCTTTTTTACCTGCTACTGTTGACTTTTGTACACTATGATTATGTGTCGCTAGAGCTTCTTGACCTCTAGATCCTTGATGGTCCTTAGTAATTGCATTGCTGACATCCTGACTGCCCTCTGCTGGAACAGAGGTAGTCTCCCTAGGGGACCAGGCCCTTCATCCACAACACCCTCGGTTTAACCACCCTTGGTAGCATCTGGCATCCTGCTAAATTAGAGCCTCTTAAGGCAAATTGATTTTCTTTCAAAGACCAACTTGACTCCGAAAAGTGATTCAGAGTCCTACTTCACTTGCTGCTGCAGAGAGAAATCTCAACCTTCATTTTCCTTTAACACGGGCCAGCGTGTTCCTGCCTCTGAGTTGTCTATGAGCTAATTCTACAGATGCTCAGTGAGGAATTAAACCTTTTGCTCTAAAAGTCATGGGCATGAAGCCCCTCTCCTTCCTCATGGTGAGTCATATATTGTGACAGTGCTCGATATGGTCCCTTTTTTGAAACAAGCTGCAAAAGTGCTTGTTCCAATTGTGCTTTTGTTTGAAGTTTTAATCTCACAGATTTGTGAGAATGGTTCTTTTCCCTTCACATTGATTATGTGTGGAAGCAAGTCACGGCCCTATGCTAGCGCTCAAATGACGCTGCTTTGCCCTAGAAATGTTTCCAACAGATAAAAGTATTTATGAACATTGAGAAAACCAGGGCATGTGCTCTGATCACGTGGAATATTCATTTCACCAGAAGGTACATGTCAGTCACTACAAGAAGATCACATTTGAAATGACAACAGTGTTTCAGTAATGAAACCATAGCCTTTCAGAGACTTCATGAAGATACCACAGAACTGCCACATCCACACCTTGGAAACAGGCCAGGTGGGCACCCTAATCACTGCTGACAGTGGGACAAGGAGGGTGAGACTGATGAGTCCAAGTCAGTCAGCTCAGCTGTTAGATGAAGATATCCTTGAGTACAAAACCTTGCTGTGTTTCACAGGTGACTCTTGTACCATATCTGCTGGCTTATAAGCAGTAGTCGGTTAAGTGAAGGCTTTTTGTTTTGTGTAAATGCCTGAGCAGTGAAATGATCTCTGTATCGCTCTGAAGTCTGTGAGGCATGAGTAAGTACCATTTCTCCTTGTTTGACGGGAGTGGTTTTACCCTTGTATGCGCTCTCTGTGCCTCACACTGTGAATGGGTATAACCAGGCATCCCAACAGTGGCTCACCTGATGGCTGTTCCAGGAAGGGTAGAGATTTTTTTTTTTCAAAGCACCTTCCAAACTTTGCAGGTTCTCAAATAGGAAAAGAAGGCAAAGAGACAAAGTGATTTGGGGATTATTTCCTGTTCTGTGGTAATAGCTTTTACTTAGTGTGGCATGCCCCCTAAAAATCCATCATGATGTCAGGAAACTGAATCTGCTCTGCAGTCATGGGAAATAAAACCAGCTAGCCTCCTCACTCCTGGCCTTCTTCAGGTCTGTGCGTGTCTGATGTGCAGGGTCTTAATCACAAGGATGCTGGTTTACAAGGGTCCCTCAGAGCCTTTCTTCAAACCCCTTCCATTTTTAGTATGCCTCCCCCAGATAGATATTTGGCATGCCTTAATCAGCAGTTAGAACCCCTTCTCGATCTGTACTTTGTTGACTGAAGTTAGAGGTGGACTCATTTCAGAACAGGTTTTGTTCTTTAGTTTTACAATGCATTTGTAATTTGCAACTGTTTCTATGACCTAACATCACTGAGTTAGACCCCAAAGTCATGTCATTTGCTAAAGGAAAAAAGTAGAGACTTAATTACTGTCCGGAAGTTATTTTCTTCTTTAGTATAAGTTTCCCACTTTGAGTAGATATTGCTGTTAACTTTTGCCTCCTACCCTGTTTGCTTACCTTCCAAAATCAAAACACTTTTCCCAGAGAATTACTAGCCTATTGAATAGACTTCTGAATAATCTGTATCCTGCCTGTCTCCTGTTAATCCGCAGACACAATTCAGGTATTTGTCAACGACTCTCACACCTCTTCACCACATTCACTGTATCCATTTGTTGTCACCAGTATCTCCCTCCCCCAAATCTATATGGTAGTAACCTTGGACAAATTCACATTTATGAATGGCATGGACTTTTAGAGGATCAGATCAATAAATAGGATTTTTCACTTTTTTTTTTTGGACTGTTGCATTCACTATTTTAAACAAGAAATCTCAAGTACATGGACAGCACTCACAGCAAGCCATAGGCAGAAAACTGATTACATGTTCTCGACCAAAGTTTAGAAGTCATTGTGTGACTTAGGGAGTCTAACAGGTCATCCTCAATCCGTGGTGTTCACAGGAGAGATGCCACGTTCAGAGGTTGGACATTCTTTCTTTGGTGCCATAGGGAGAAATGGAATCTCTGTGTTTTCTGAAGAGTCTCAAAAGGCAGTGCCGTTTACAAGGATCACAAACACACATATCCTCCACCATCCGCGATGGTCACGTCCAGGGCCACGTGAGGACCTCCGGTGTTGGAGGAGGTGCCTACCCCACCTTAGTTAGATGATCACTTTCTCCCCTTTGTACCATTTCTTGACAAGGTTTCCCATGGTCTTTACCCTTCCAGAGCCCAACTTTGCCTTGAATCCATTGCCTCTTAGATTAATAGTGTGCATTGTTTTTTATATGCAGAATGTTGGAGATTGTATGTCTGCCTCTGTATCTTCAGTCATGATTTATGCTTAACAGCTGAGAAGTCATCACAAATTGAGGGCTGTGATTTCAAGAGTCTTTTTGAACTCTAAGCTGAAGCCTTTACAATAAATTGGGAGTGTGGCAGGGAAGATGACTGTTTTGTTTTTTTTTTTTAATTCAAATCCTATTTATATACTATTAAATTTGAGGTACTATAGTTTATATAAAAGTTGAATATTTAGATGATATATTTCAGTATTAGGAATTTGTCTGAAGCCATTATTAACAAATTAAATAATAAGTATGAAAATGATTGTCAGTAAATTATCATATTGAATTTTTTGTTTATTTTGTAGTGTCTTGTATTTATCTGCACTTTGTGTGTATATATATATATATATATACACACACACATATATATACAAACATGTAAATAACTTCATGTTATTCCTTATCTGAATTGCCACAATTTCTTTAATGTATGTTTACACTGTATTTTAAATTACTTTAAAAATAAACTATGTTTAGCACATTTTAATTTAGTCTTTGTATTTGAAAACCCACCATGTTAGAGGGCAGCTGTCTTAGATTCATATAGAGAAAAATCAAAGTTTCAGGTACTGTGAATGGTCATTTTGGGTATGGCTGAATGGAAAAATCATAACGGAATTGATAACTTTTTCCTGATAATTGGATCCTTTCCTGAGCAACTGTAATGTTGGTACTTACTAGTAATGCAGGTACAGGATTTCCCTGGTGACACAGTGGATAAGAATCTGTCTGCCGATAGAGAGGACATAGGTTCAATCCCTGGTCCCGGAAGATTCCAGGTGACTCTGAGCAACTAAGCCTGTGCACTCTAGAGTGTGTGTTCCTCAACAAGAGAAGCCATCTCCATGAGAAGCCCACGAACCACAACAAGACTAGCCCCTGCTTGCTGCAAATAAAGAAAGCCCATGGACAGCAACAAAGACTCAGGGCAACCATAAATAAAAATAAATAAAAATTTTTAAAGTAATAATAATGCAGATGTCTGCAGGAAAAAGAAGCAAATAAATCATAAACAAATTATCAAAAAAAAAAAAAATAGGTATGTAGGCTTACCTGAAATAAAATAAATACATGAAAGTTCACAAGTGTACTCTGAAAGAAGAGCA EMBV3_09084 CATGCACACATCGTGGAACTACTTGTTAGGGAAGCAATGCAGAATCAGGTGAATGCTAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01818 GAGTGCACCCTTCTTTCCCCCTCGCAGTCTGACCTGGAAGTGATTGAAACAATAGAAACC Gene GeneID:615631|LOC615631:XM_002684848:208_cdna Constitutive 0 NULL GeneID:615631 1 GENE LOC615631 NULL UPF0524 protein EMBV3_02492 CAAGACAATCTCCTTCCACTACCTGTCTCTGCCTTCCAACCTGAAGACGCCCATCACACT Gene GeneID:541273|FBLN7:XM_002691125:110_cdna Constitutive 1 NULL GeneID:541273 11 GENE FBLN7 NULL fibulin 7 EMBV3_23289 TGGTTTAACATGTGTGCAATCATCAAGCACAACGCCTGGCACCTGTGGGCTCGGTCAGAG Gene BVT0102_087331 - 1 EMBV3_04571 GK000009.2:90448997-90484031 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236257 TCONS_00236258 TCONS_00236256 1 XLOC_144421 NonCoding TCONS_00236257 XLOC_144421 NonCoding NonCoding SYNE1 9:90470071-90475188 x TSS176894 1900 3 TCONS_00236257_1 51 0.207368421052632 4 0.629397967161845 2.91257034939785e-11 0 3.21515430430423e-08 3.28316065302688e-08 0 0 0 0 0 0.000346424692403314 0.000557153108525464 9.30009104045056e-05 4.14557038171882e-08 4.05370689320715e-08 0 0 0 0 0 7.63043850852887e-11 0 0.000218714519313025 5.45437747962645e-16 3.39392684094649e-259 0 0 0 5.22432195108125e-05 0.000155537462860022 7.40115533870312e-05 XM_002705239.3 SYNE1 PREDICTED: Bos taurus spectrin repeat containing, nuclear envelope 1 (SYNE1), mRNA. 8e-88 329 98.42 0.0994736842105263 XM_005266877.1 SYNE1 PREDICTED: Homo sapiens spectrin repeat containing, nuclear envelope 1 (SYNE1), transcript variant X1, mRNA. 2e-58 232 88.40 0.0947368421052632 0 noncoding AATGCTTTGCTGAAACCCTTCGAGACGTTATGGGTTTTTTGGACATGAGCCATCTGCTTCCTTGTTGTCTGCTTCAAACTCCAACGTATGGTATTGTGTGACCTCACCATGCATCAGGCATAAGAGGGTAACATTCATAGTCAAGAAGGCTCATTAGAGCATCGTGGAGACTCTGTAAACGAATTTTGATCACCTGTCGCAGCTCCTCAGTCTCCCGTCCCAGGTCTGCCACTTGCTGAGACATTGTTTCTGTATGGTACACACTATCGAGGTACTGTAATTTCTCGGTCATTGCTTCCAGATCATTGTGAATATCTTCAGATTCTTCTAGCATGGTCTAGAGTGAATTATCAACATCCAGGACATTGATAGATGGAGAGGAAAAGGAAAGACCTTTTATGCTGATGGGACAGCATAAGCAAAGGCACAGAGATCCTCAAACAGAACAACTCTGCAATTGTTTAAGAAAGACTTCTTGAGAGGAGAGTGCAAGATTGATTAGAGAAGAAAGATAAATACAGGGAGACTAATTAGGAGCCCGTTAAAGCATTCCCAGAAGGGGAAAATGAGGTTTTGATCTAGAACTCTGTCAACACAAATGGAAAAGAGGATGTATTTAAAAGACAAGAGTATACATAAATCAGAACAAAAAAGAAAATCTAACATACTTGAGGATATCCATGTAACTTAAACAAGGACCATTTTGTATTTGATGGCCTGATAACTGGGCTAAAAGATACCTATATCTAACTCAAGCCTAAATTTAAAAAGATGAAATAATTTCCTGGATGATATGGCCAAGAGAAAACTTCAGAGGAAGTGAAGTCATGCAGCCTCCATGTGGTGTGGACTTATTCCAGCTGGCCCCTACTTCCTGCAGGAGGTCAGTTCCCTGTGACCAGGCGGAAGCGCTGGAAGGAGGAGGCATGAGATTCAGGCTCTGACCGAGCCCACAGGTGCCAGGCGTTGTGCTTGATGATTGCACATATGTTAAACCATTTGATCCTCGTGACAACTCTGCAATATGCATATTATTTACATCTCCATCTTACTGATGAGAAGACTGGATTCTGAAAGGCAAAGTAGTTTGCTCCAAAGTACACAGCCCTAAGTGGCAGGACTTGGTTTTCCCATCAGTCTGAGTCTAGAGCTTGTGATCTTTCCACCTGTCCCTGCATCTCCTCCTAAGGGTAGAATTTCCCACCATATCCCTGTGTAAAATTGTTTCAAAGAAGCTGCAAAAAAAAAAAAAAGATACTACATGGATGATTATTTTTGGTCTTGGGGAATGGAAAATTTAGAGGTGATAGAGGATATTTATTTACTTATTCATGGGTAGCTGCTTTTTTTTTTTTTTTCAATCCCCAGGACAAGTTGTTAAAGCTACCTTGGCTTTCATTTTTCTTGGCATCTTCAATAATTTTTCATCACATTCTTCCAAATTTTCTGTCAATCTAGCCAGTTAAATCAAATTACCCTCTTAGTTACCTTTTGAAAACTATTTTTGCTAAAGTTACCTGATGTGAAATGTATTGTTCTCGAAGCTGGCTTGCAGAATTCCATGCAATCTTTCCATGTACCAAGATTTTGGTTTTTTCAATCCACCTTAAAATTAACTCAAGTATTTCATTGTATTCTTCTAGATGGGATGCTGCCTGAAAAATAAATCATTACCATTCAGATAAAAAATGGATACTCTGCTTCTTGAGCTAGAAATCAGTCTTCTATTTCTCTTTGGATACAACAATCCTGGCAGTTGATCATTATAATATCTATGATATCTAAAGGTATCATGAAAAATAATTTCCTTATTGAAAACCTATTAAAGACTTCCCAGTGATGTTAGGATGAAGTCCAATTTCCTAATATGCTTGAATAATCTGTCTTAAAAAAAAATCTC TCONS_00238013 TCONS_00238013 r 5' 0 TCONS_00238010 TCONS_00238011 TCONS_00238012 TCONS_00238013 r 3' 635 EMBV3_33943 GGGAACTGTGCCCAGCCCGGCATTGTAAAACAATCCATCTCCAAATACATCGTCCTGTAC Gene BVV0101_070607 + 1 EMBV3_29857 GK000020.2:15214006-15558580 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29358 TCCGTCACGAGCACTGGGGCGGGGGTCGGTGGTGCCTTTTCCATATTATTAGTTTTCTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03916 CGGACCCCTTGGGAAAGATGTGTCACTTGGAGGCCCCGTTTTAGGAATGTTCTCTGGAAA Gene GeneID:506638|LOC506638:XM_002695849:300_cdna Constitutive 0 NULL GeneID:506638 19 GENE LOC506638 NULL similar to zinc finger protein 18 EMBV3_22045 ATTGAGAGTCCAAGTAAACCTTAAAGCCAGCCCTCCGTATCTGCAGCACCTCTGTGTCTG Gene GeneID:533597|LOC533597:XR_084152:55_cdna Constitutive 0 NULL GeneID:533597 X PSEUDO LOC533597 NULL similar to carbonic anhydrase VB, mitochondrial EMBV3_04937 ATACAGAGTAGCCCAGCTGTGTGTGGCCTTGAAAAAGCAGCTGTGAGTGAGGCCCTGTGT Gene GeneID:514218|ERMAP:XM_002686531:737_cdna Constitutive 0 NULL GeneID:514218 3 GENE ERMAP NULL erythroblast membrane-associated protein (Scianna blood group) EMBV3_03283 GGGCACAAGGACAAGAAGGAGCAAGTATTCTCGTAAGGAGTGGAATGCAGAGTAATGGGC Gene BVV0102_093264 + 0 NULL GK000010.2:93204949-93309213 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41076 CAGGTTGAACCTCGGGACCTTGACTTCAGTACCTCTCATGGAGCTGTGAGTGCTACTCCA Gene GeneID:510824|MRPS18B:NM_001038524:84_cdna Constitutive 0 NULL GeneID:510824 23 GENE MRPS18B MGC133993 mitochondrial ribosomal protein S18B EMBV3_42157 CTGGAAAACCTCCCAGTGACTCATGCTCTGGCTCCTCTATAAGGAAACTGAAGTCCATCT Gene GeneID:327677|CD38:NM_175798:7_cdna UTR3_Alt 2 NULL GeneID:327677 6 GENE CD38 NULL CD38 molecule EMBV3_42291 TTCACTGTGCTCTCTTGCTGCTGAACCCTGTGCCTTGCTTCTGAGATCCATGGAGTCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02637 ACGGCAGTAGAAGAAACCAGCACCTTTGGACTTGAGTGAGAAACTGGCAACTTCCCTGAC Gene GeneID:100337418|LOC100337418:XM_002686894:113_cdna Constitutive 0 NULL GeneID:100337418 4 GENE LOC100337418 NULL HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1-like EMBV3_30471 ATGCCTACAGCGACAACAGTCTGGACCCTGATGACGAGGACAGCGATTACCACCAGGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31881 GAGGAAACCCACAGTGCCCATTTCATCCTGATTCCCTTTGCCCACGGATGTTTGCCTTGT Gene GeneID:534801|GFRA1:NM_001105411:66_cdna Constitutive 0 NULL GeneID:534801 26 GENE GFRA1 MGC166219 GDNF family receptor alpha 1 EMBV3_03863 GTGGAGGTGAAAGGTGAAAAACCTGCCAAAGTAGATAAAATTTTATTAATATCAGAAGAC Variant GeneID:281420|PPID:NM_174153:54_cdna 597^719 1 EMBV3_43278 GeneID:281420 17 GENE PPID MGC137782 peptidylprolyl isomerase D EMBV3_06293 TCCACCATCTCCAGCCACCTGGCCACCAAGCACCAGCTCTGCCAGAGCCTGGCCGGGAAG Variant GeneID:618084|QDPR:NM_001076492:20_cdna 412^510 2 EMBV3_16290 GeneID:618084 6 GENE QDPR MGC127076 quinoid dihydropteridine reductase EMBV3_24091 GGCCAAAGATAAAAGTGGCTGATGGGCGTTGGCCTTAAAAAAGGATGGGGCAGAAGAACA Gene BVT0101_006941 + 0 NULL GK000013.2:80114073-80167055 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43351 CTGTGCTCTCTCTGCTGGAACTGTTGAAAGAAAATATATAGAGTGGATCTATTGCTCATC Gene GeneID:282032|RASA1:NM_174449:6_cdna Constitutive 1 NULL GeneID:282032 7 GENE RASA1 NULL RAS p21 protein activator (GTPase activating protein) 1 EMBV3_31735 GGGTAAAGTTATAAATGCTGACAAACCTGCAGTTACACAGCTTTGACTGCTTATGAAGTG Gene GeneID:513116|DDHD2:NM_001075598:62_cdna Constitutive 2 NULL GeneID:513116 27 GENE DDHD2 MGC139315 DDHD domain containing 2 EMBV3_13165 GATGAAGAACAGCATTATGAGGATCCAGAAACTGGCATGTCATTGGAGGAGGAAGAGGAG Gene GeneID:520291|CARD6:XM_002696354:13_cdna UTR3_Alt 2 NULL GeneID:520291 20 GENE CARD6 NULL caspase recruitment domain family, member 6 EMBV3_10509 GAAGGCACAGCAGTTAATGCCACTCTTGTTGGTAGCCTATGGCTGACGTGGTTTTGATCC Gene BVV0102_033049 + 0 NULL GK000026.2:24844847-24848928 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00151983 TCONS_00150631 TCONS_00150622 TCONS_00150629 TCONS_00151980 TCONS_00151979 TCONS_00150627 TCONS_00150623 TCONS_00150630 TCONS_00151981 TCONS_00150628 TCONS_00151982 2 XLOC_092232 XLOC_091913 Coding TCONS_00150628 XLOC_091913 Coding Coding SLK 26:24786018-24848612 j TSS112775 7813 1 TCONS_00150628_6 1044 15 0.875417378940137 5.89103572778671e-05 1.61820714896492e-06 0.000108218686103666 4.44309805858877e-18 1.31143746697358e-10 9.14312827687438e-08 5.77266619953753e-05 8.64617523173498e-10 7.66584974167377e-05 4.09656804545395e-14 8.79285102562038e-06 2.71451669931791e-10 1.19848440883139e-10 1.82818861573043e-08 7.97202811651784e-14 0.00531433432404012 0.00286278349939377 0.00259813768862506 4.27420908416346e-05 7.21872967246422e-39 1.00647511842587e-89 0.00386513496639658 0.00101072906309783 0.00335862730773065 6.01505853553117e-06 5.43873485806407e-09 3.98835012044936e-05 0.000469653619703986 0.00047995035419721 2.44074812767361e-12 XM_005225584.1 SLK PREDICTED: Bos taurus STE20-like kinase (SLK), transcript variant 0.0 7813 100.00 0.554332522718546 NM_014720.2 SLK Homo sapiens STE20-like kinase (SLK), mRNA. 0.0 5802 85.80 0.636759247408166 TCONS_00150628_6 sp|Q9H2G2|SLK_HUMAN SLK_HUMAN STE20-like serine/threonine-protein kinase; 0.0 1736 86.14 0.99904214559387 3 coding 0 1 0 1 0.159747801237846 0.366740826451034 0.011871312599382 0.858659985662862 TGGCGTCCGGACCGCTCGGACCCGTCGGGCCGGGCCGGGTGGGGACGAGCGTCGGGGCAGGTGCCGCCCCACAAGGGCCGGCCGGGGGCCAGGCGTTTAGCCGTGCAGCTCGCGGGCCGGGCTCGGCGGAGGGGCCGCCGCGCAGCGCCCCCACCCCGTGGGCCGGAGGGGGAGTCGCGCCCCGCCTTCCCCCGGGACCGCCTGGCCGGAGCGGCGGGAGCCCGAACTGCCCGCGCCCGCCGCCGCCGCCCGCCGGGCTCGCGCGGGAGACGAGGGAGGAGAAACTTTGCCTCTTATTGTTTTTGATCCTTAAGTGTGAGGAACTCTGTTGGGGAGGGAAAATGTCCTTCTTCAATTTCCGTAAGATCTTCAAGTTGGGGAGCGATAAGAAGAAGAAGCAGTACGAACATGTGAAGAGGGACCTGAACCCAGAGGAGTTTTGGGAAATTATAGGAGAATTGGGCGACGGAGCCTTTGGAAAAGTGTACAAGGATGGCCCCTGAGGTAGTCATGTGTGAAACATCAAAGGACAGACCCTATGACTACAAAGCCGACGTTTGGTCCCTGGGTATCACTTTAATAGAAATGGCTGAGATAGAACCACCTCATCATGAATTAAATCCAATGAGAGTGCTGCTAAAAATAGCAAAATCTGAGCCCCCTACATTAGCACAGCCATCAAAATGGTCTTCAAATTTTAAGGACTTTCTAAAGAAATGCTTGGAAAAGAATGTGGATTCCAGGTGGACTACATCTCAGCTGCTGCAGCATCCTTTTGTGACCGTTGATTCCAACAAACCAATTCGGGAGTTGATCGCAGAGGCAAAGGCTGAAGTTACAGAAGAAGTTGAAGATGGCAAAGAGGAGGATGACGACGAAGAAACAGAAAATTCTCTGCCAATACCTGCCAGTAAGCGTGCCTCCTCTGACCTGAGTATTGCCAGCTCTGAAGAAGATAAGCTTTCACAAAATGCTTGTATTTTGGAATCGGTCTCAGAAAAAACAGAACGTAATACTTCTGAAGATAAATTTAACAGTAAAATTCTTACTGAAAAACCCACCAGTGATGAACCTGAAAAGGTTGTGGTGGGTACTGATGAACATGTTAATGATACTCATTTAGAAGCTATGGCTGAACTTCATAATAAAGCAGCAGTAATTGAGGAAAATGGAAGAGAAGAGAAGAGACCCAAGCTTGAAAATCTTCCTGACACAGAAGACCATGAGGCAGTGGACATTAATTCAGTCAGTGAAGGAAAAGAAAATAACATAATGATAACTTCAGAAACAAATACTGAACAGAATCTGAAACCTGAAGAAGAAACAGATCAGGAAAAGCAGCAGATATTTGAAAATAAGATTATAAATTCTGAAGAAATTGAAGATACTACTGTCCAAGGAATGGATTTAGTTTCTGAAGAGACTGGAGAAAAAGAGGCAGATATTCAGGCAATTGAAAATGAAGTTGAGTTTACAAAGGAAGACATCCAAGAGAAACTGGGAAAAGATGACAAAACTGAAAAAGATAGGATCAGTGATACAAGCAAAGTGATAGGAACAAATGAGGCAGAAGATGTTGCTCAGAGGGCAGCTGAGAGCAGTGCTGAGGATGCTCAGCGTAGTGATGGGAAAGAAGTGGGTGATGTAGGCCAGACATTAGTGATCAAGGCCACGGAGGGTCCTGAGGCTGGTGGTACTGAGAAAGCTTCTGTTGAAGAGAGAGTTGAAACTAATGAGACAGACAAAAAATCTGTAGACGGTGAAGGTGAGGAACAACTAATCAGCAGTTCAGAGAACCGATTGGAGACCCGTGAGGAAGTTGGGACAAATGATGTTGAGATTACTGAATCAAGTGGCACTGAAGGAACAGAGGTCAGAACTGTAGTGACTGATACTGACCAGAAAGCTTTAGAAAATGAAACTCCTGATGTTCATAAAGCCACTACTGAGATGGACACAGAGCAAAAAGAAATTCCATGTGAAGTGCCAGTTAAAGCAGAACCTCAGGTCACTGCCGCTCCACAGCCCAGTGAACCTCAGCTTGTTCCAGTACCCAGTATTAATATCAATCCTGAAGATGCAGAAAATAAAGGAGAAATAGGTGCTTTGTCAAAACCTGAAACCATGTTACCAGAATCTGAAAATCAAAAGGAAAATGATACTGATTCAGGCACTGGTTCCACTGCTGATAATAGCAGCATTGACTTGAATCTCTCCATTTCTAGCTTCCTAAGCAAAACTAAAGACAGTGGATCAATATCTTTACAAGAAACAAGAAGACAAAAGAAAACATTGAAGAAAACACGCAAATTTGTTGTTGATGGTGTAGAAGTAAGTGTAACAACGTCAAAGATAGTTACTGATAGTGACTCCAAAACTGAAGAGTTGCGGTTTCTTAGACGTCAGGAACTTCGGGAATTAAGATTTCTTCAAAAAGAAGAACAAAGAGCCCAACAGCAGCTCAATGGCAAACTGCAGCAACAGCGAGAGCAAATTTTCCGACGTTTTGAGCAGGAGATGATGAGCAAGAAACGACAATATGATCAGGAGATTGAAAATCTAGAAAAACAGCAGAAACAAACTATTGAACGTCTAGAACAGGAACACACAAATCGCTTACGAGATGAAGCCAAACGCATTAAAGGCGAACAAGAAAAAGAGTTGTCCAAATTTCAGAATATGTTAAAGAACCGAAAGAAGGAGGTTATAAATGAAGTGGAGAGAGCACCCAAAGAGCTGAGAAAAGAGCTCATGAAACGCAGGAAAGAGGAGCTTGCACAAAGCCAGCATGCTCAGGAACAAGAGTTTGTTCAGAAGCAACAACAAGAATTAGATGGCTCTCTGAAAAAGATCATCCAACAGCAGAAGGCAGAGTTAGCCAATATTGAAAGAGAGTGCCTGAATAACAAGCAGCAGCTCATGAGAGCTCGAGAAGCTGCGATTTGGGAGCTTGAAGAACGACACTTACAAGAAAAACACCAGCTGCTCAAACAGCAACTTAAAGATCAGTATTTTATGCAAAGACACCAGCTACTTAAGCGCCATGAGAAGGAAACAGAACAAATGCAGCGTTACAATCAACGACTTATTGAGGAATTGAAAAACAGACAGACTCAAGAAAGAGCAAGACTGCCTAAGATTCAGCGTAGCGAAGCCAAGACTCGAATGGCCATGTTTAAGAAGAGTTTGAGAATTAACTCAACAGCAACGCCAGATCAGGACCGTGACAAAATTAAACAATTTGCTTCTCAAGAAGAAAAGAGGCAGAAGAATGAGAGAATGGCTCAGCATCAAAAACATGAAAATCAAATGCGGGATCTTCAGCTGCAGTGTGAAGCCAACGTCCGCGAGCTGCATCAACTGCAGAATGAAAAATGTCACCTCTTGGTTGAACATGAGACTCAGAAACTAAAGGAGTTAGATGAGGAACACAGCCAAGAATTAAAGGAATGGAGAGAGAAATTGAGACCTAGGAAAAAGACACTGGAAGAAGAGTTTGCTAGGAAACTACAGGAACAGGAAGTGTTCTTTAAAATGACCGGGGAGTCTGAATGCCTTAACCCATCGACACAGAGCCGGATTTCCAAATTCTACCCCATTCCTAGCTTGCATTCCACTGGATCGTAACAGAGGGAAGCATGCTGTGGTTGGGTTTGGCTTTTTAAGTACGTCATTCTGTTCTCTTCATCTTTAGCCGTAGTCTATCAGAGAGCTCACGAAGACAATCACCTGCCTCACCTTCTCGGTGTTTTTTGTTTGTTTTACTTGTTTAGTAACGATGGAGGGGAAGGAACTAAGACAGATGCTGGGCCATGTTGGCAAAGTAGCATCTCACAGTAATTCCCTAAGGTGATTTTTGCATATGCTCTTAAAAATCGTGTTATTTAGATACTGTTACCTGAAAGTTATTTAAAGAAAACTGTTACGTCATTTAAGTATTAGTAAATATCTTTTTACATGACAACTTCTCAGTGATGTCTAAAATCTATAATTGAAGCTCTCTACACTGTGGAGAATTGGAATAATTTTTTGGTGAAGTAGCTCTCATGAAAAAATTTTGAGTGGCTCAAAATATGATATTGATTCAGTAAATAAATCTCTTTAAATGTTAGCATCGGACTCTTTTAAAAGAGAAAAATTATTTCAGTAATTTGTCTAAAATAATTACTTGTTTAGACATAAACTAATAATTAAGGGTGCTAGCTTTATTATATAAAATAGTGCCTAAAACACTAAATTTCAATTCAGTCTAAAATAGCATTTCCTCCTTTTGATTCAACAGGGACAAAACACCCTTAGCATTAAGCATTATTGTTTTTTAAATCTTGCTCGTATTACCATTTGATAGAAGTTTTCATCCTAAAGTATAAGTTGGAAAGATGAAAAAATAAAAGGTAGCTTTTAGATGTCCAAATTGAAAATATAAAACTCACCAAATTAAAAAAAGATAGATTTAGCTATCTCAGCTTATTTCCTAAAGTAATACATGAGCTGGTTAAATGGCTTCTCCCATCTTAGCAACTTCTGTTTAAAATTCTGTCATAGGCCGGCAGGCTCTGAGTTATATTTATGAATATATTTTTCTGAAATTAATCTCAAAAGAGGCATTTGTTCAGAGTAATTTTGAAGGAAGAATTTAAATAAAATATTTAGGCAAATACCAGAAATGACTTTTTATTGTTTTGAGATAAAGTCATTCATATTTTGGTTTTGTTTTTTCCATGTTTAAATTATTTACATGATTTGAGTGGGAAAGTCCTAAAACCTTTATCCTGTGGCTGCTTGATATGTGTAATTATTAATGAAATGTTCACTCTAGTCCTCTTGAGGGTTAGATTTTCAAGCACGTGTCAGGTCAAACAGTATTACAAACCATATTTTGAGGTTGTGAGACAGCACATTTGTAGATGAAGCTTGCTGCCTGCCGTTTGCAGACTATTAATGAGTGCTAGGTACCAAATTGTAGAAATGTCAGTTTTTAGTAATGTTACAGTTGAGGCTGGTGAAAAATGCAAATGAAACTTTGTGGGAACACTGATTCATGTTAAGAAAATGTAAATATCTGTAGCACTTTCTTACAGTTAATTTGAAAACTTTGAATGCTGAACCTTATTTTGTCAGTGGTTTATAGATGATTTAAAAATGCATGTGATTTTAATTTTGTAATTGTTTTGACAAGCATAATTTACTTGGACAACTTTGTAGGTAGCCTTAACTTCTGCCCAAGTTTGTTTTTTATATAAATATATATACATATATATATTATGTATGGTTGTAAATTCATACACTTATCACATGAATGTGTTACTGTATACAAAACTTTGAACGCTTTATTCTCAAATGCTGGACTGAAAAATGTTTTGAAAGCCTTTTAAAAAAAAAAAATATATATATATATATCTTTATAATGTTCAGGATGATGGAAATTGTTTATATTGTTATGATAGAAATGACAGTATAATGTTACCCAGTGTATTTAATGATTTATTTGAAGGAGAGGAAGAAGGTTCTCCTACCACTTCCTCCTTTGAGATTTTCAGTATATTGACTTTTTAAAAATGAATACTTCAGGCAGTAGACATTTTTTCAGTATCATTTAAGTGATATCCTATGTGATGAATGGCTTATGGCCCATAGTTAATTTGGTCTGAATATTTGGTTCTTTTTATTCCTTTCAACTTGACATTCAGAGAATTGAATAAAGGAAAGAGGCTCAGAGTAGAAGGATGGACCCTCTGGTAAGTTTATTAGCAGCTCTTGCATCTCTGTAAAATTACCCTTTGGATTCCTTGTTCACACTCGAGTTCTCTTTCAAATATGACCAGACCATATTCATGTGGGAGCAGGACTACAGAATGATACATATGTAGAGGTAAAACCTTCATTTTAATACTTAGAGTTACATAAATCTTTGCAAAAAGTGTTTTGTTATAGACCGTGCTGTTTGTGCCCATCCCTGCCCCCTTCCTGCTAGGCCCTGTATTCACATACAGAAGAGTGGTCTTTCTTTCTTCCATGAAGTGTACATAGGAGGTTGGGGGGGCAAAGACACCTTTGCAGTTGAAGAATACAGTCAAATCCATTCCTGATTTGGTGGTTTTGTTGCTGTGACAGAATGTGCTAGGAAATGCGTAAAAGCAGTTCTCCATCTGTGCCCCGTAGTTACTGGCCTCGCCCCGTCCCTGCGTGCTGTGGACACGCTGGCCACCACACTTCTGCAGGCCTAGCTCATGCAGCTCGTTGCACCAGGTTGCCTTTCCTAGTCCTGTCAATCCATGGTTAGGTGCGAATTGCTGAATTAGCTGCTATAACTCTATGGAGTCAGTTAAGCTTTTTCTTACCCTTTTCTGTGAGGAAGCTATAGGGTGGGTAAAGAGGAAATTTGGAGTGCTTATACCTTGCTGAAAATGTTAACACTTCCCTGTGACAGGATACAGCAAATTGTAATTAAATATAAACTAGAACCAGAGCTACCTCTAAGGAGTGTCTCCTCAAGCACAAAGCTCTCAGGCACATGAGACTCACTGTCACAGAGGGCCTCTGACTTCCTGAGCGTCAGTGAGCTTCAGAAGTGACTGTCCTTTTGTACTCTCCTAGTTCCCTTGTAACTGCAGTTTTCCCCATTCCACACTGTGCTGAAATGACAAGGACTCTTCTGAGAAGCCAAATCTGTCAAATGATTTGCTAGAGATACTGTTGACTGAAGGAAAATGGACAACTGAGGTGGAGGAGGAGAGCTCTTTAGTTCCAGTTCTAATAGGCTTCTGATTGAATAAATCCATTCTTTTCTGGGAAATGATCTTTTATAGGAAATGGGATGTTTTCAGTGCTTTTCTTAAGTTGAAGGCACAGCAGTTAATGCCACTCTTGTTGGTAGCCTATGGCTGACGTGGTTTTGATCCAGCTTTAAAACTTCTGCTGCTCAGCTTGGGGTAGAGTGTTATACCAGTGTTAAATGTTGGCTGTAGCTTTTTGTGATCCTTCTCTGATTTGCAGTGTAATAACTCCACAAGCTACATTTTTCAGAAAGAATTTGTTTCAGAAAATGCCTCTTGTCTGTTTGGGAGCAACATGTCTTTTCAATCATGGGATTGACAAATGAAAAATAAAGTTATTTCTTAATCTACTTTGGGAAGCAGTCTTTTATTGAGACTCTTTGAAACTAGATTGTCCTGCATGAGAATGTTCTGTAGCCGTTTTAAAAATCCTAGCTGTATTTTAAAGCTTGCAGTTCTCCAGATGGTCTGACCGGGACAATCAGAGGTACCATTGTTCCAGAGTGTCTACTCACCACACACAAGTGTCCTTTTCACTGCTAACTTGGAGGGAGTGGCTTTTGTCAAGCAAACCCCTCCTTTGAGTGGTGCTTAAAATATTTCCATCAACATATGTGTATATATATACCTCTCTTTTAATGTCCTTTTTTTCCCTTGAAATAGATTATTTTTCTCAAACATTTCACAAACCACATGACTCATTTCTGCTAAAAATAACCTGTTTTTTTTCATCACTAATACGTTCTGTGAGAATCAGTAGACATTAGGCAGCATCATCTGGCGAGTAGTCAGCTTGGCCGGAGGGAGGCACCATGTGTCACTTTCTAATCCAGGAACATTGCATACTGCAGAACTCATGCTTGACTTGTTTTTTTTTTTTTTAATGAAACAAAAGAGGCTAAGACCCACTTCCATCCAGCTGAGGACATATCTCATATCTGGGTTCTATTCAGAGAAGTTAGCAGTTTGGGGCTTTTACCCTATTTCTCTTGGGTGTCAGATTCTGTGAAGACTTTGGATAGCTTGGATGGGTAAGT EMBV3_07261 CTGAGGGCAACTTCAAATTCGGCTTTGAGTGTGTTGACTGTGCCGTGGGGACCTTCTCTA Gene GeneID:516256|TNFRSF18:XM_002694186:654_cdna Constitutive 0 NULL GeneID:516256 16 GENE TNFRSF18 NULL tumor necrosis factor receptor superfamily, member 18 EMBV3_05806 AGTGTCAGGAAACACCAAACCTGCCAATGTGCCATCTCAAGTAATTTTTAATACACAGAA Gene GeneID:513985|VPS37A:NM_001046161:49_cdna UTR3_Alt 5 NULL GeneID:513985 27 GENE VPS37A MGC137205 vacuolar protein sorting 37 homolog A (S. cerevisiae) EMBV3_19344 GGGAAGAACGGAAGCTCAGAAGGGAGAATCACACATGGCTTCCAACTGAAGAGCGCCTAT Gene GeneID:518225|CNOT6L:XM_002688375:224_cdna UTR3_Alt 2 NULL GeneID:518225 6 GENE CNOT6L NULL CCR4-NOT transcription complex, subunit 6-like EMBV3_27458 TAATAGATAGGGCAATGGCTAAAGGGCAGGCGCAGGATGCCAGCACATCTGAGAACAGCA Gene BVT0102_048076 - 1 EMBV3_00744 GK000003.2:42559235-42560282 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00169678 1 XLOC_103418 Coding TCONS_00169678 XLOC_103418 Coding Coding EXTL2 3:42559325-42578056 j TSS126971 3663 1 TCONS_00169678_3 330 6 0.804751735184197 0.000157540969464111 0.00137763953499075 0.000273166238067999 0.000394971998855186 0.000159576323024252 1.0722556255624e-16 2.91568010982232e-05 0.000149737185886894 3.68805388565428e-161 9.46734458227314e-05 5.68627421829891e-06 6.66090976396065e-24 1.83631243333549e-05 0.00102295716100187 0.00175930967335273 2.83385738105058e-14 1.507233040356e-10 1.81854324255831e-22 0.000123955406432312 3.56480256708188e-05 6.25087652852269e-05 9.46353771112694e-25 8.60312986291097e-26 1.6936228939483e-16 0.000126480983094604 0.000306917353878165 4.04322676495311e-05 4.39570212953663e-35 5.05136793823026e-05 3.09523383400682e-11 XM_005204167.1 EXTL2 PREDICTED: Bos taurus exostoses (multiple)-like 2 (EXTL2), 0.0 5813 100.00 0.87960687960688 NM_001033025.2 EXTL2 Homo sapiens exostosin-like glycosyltransferase 2 (EXTL2), 0.0 1602 83.36 0.418236418236418 TCONS_00169678_3 sp|Q9ES89|EXTL2_MOUSE EXTL2_MOUSE Exostosin-like 2; 0.0 582 87.88 0.996969696969697 1 coding 0 0 0 0 -0.0340912752599314 0.856130587976646 -0.000338687657542996 0.994515449059636 GCGGAGTTGCGAGTTTTACAGAAGCCAAAGAGAGGTGGCATCCTGTAGGTGGTCTCAAGGGCCGACTTGGAGTCAAGTCCCGCCACCTGTACTCAGGAAGAAAATCCTGAGGTGGCAACCCACGAATTGGGCTGGCCGGAAGGTTGAGAGCCCGCTCACGTCCACTCCGACTACCTATCACTGCTGTTCTCAGATGTGCTGGCATCCTGCGCCTGCCCTTTAGCCATTGCCCTATCTATTAGCATCAAATCCCGGTTTGTTCGGTAGCAGTGCTTAAGAATCCAGTCTGCAGGAAGCGCAAATGATAGGAAGCGCAAATGATGATGGTTTTGCTGGGTGAACTCTATGAGTACCCAAATCCTAGTAATCCACCCAGCCCTGCGCCCCCAGACAGCGCCTGACATTTCTGTACTGTCACGCAGGAGGCAAATACCTTCCGAAAGAATGTTAAATGTATTTAAAAAGAGTTCTTTTTGAAAGGAGTGCTTACGAGATCGTGTTGAAATTGAGATTCGGTTAAGGCATTGACTGATTCCCCGACCATCTCAATCCTCTGTTAACCCCAAACTCGAGTTCGTACACGTCCCTTTTACTTCCAGGTCATCCCAGAGGCCGGAGCCGCGGCTCTGATTCTCGTGAGAACCCCATTGCCCATTTCAGGGAAGCTCAAGGAAAATTCACTCGCTGGTGGGACACGAGGGCTTGCGGAGCGTGGAGGGGCGAGCCTGCGGACCAGTCTTGGGCCCCACGGTCTCCGGAACTCCTCTTCTGTGTCTTTCCGGGAAATTGGCGTTTCATCCAGGTTATCAATCCAGCGAATGACGCCGAGTGAATGCAAACTGCTGGGTTTGGAGAAAAAGCAAAAAATGAGTAAGCGAGACGCCCCTTGCGTTTTATGATAACCAAGCTGCAAGCAAATAAATCGCCTAGGTCTCACTGCAGTCTTTTCTTCACGAGAGTGCCAAGAGAGCCTGTTCCTATCAATTACTGAAGCCATAAGGAAAAATTTTTCAAAAATTAGAACTTTACCATAATGAGGTGTTGCCACATCTTCAAGCTCCCAGGAAGAGTGATGGGCATTCGTGTGCTTCGTCTCTCTTTGGTGGTCATCCTTGTGTTACTGCTGGTAGCTGGGGCTTTAACCACTTTACTCCCTAATATCAAAGAAGACAAGATGCTCACTTTGCGTAGGGAAATAAAATCTCAGGGCAAGCCCACCCAGGATTCCTTTACTCTCATAATGCAGACGTACAATAGAACAGATCTCTTATTGAGACTTTTAAATCATTATCAGGCAGTTCCATATCTGCATAAAGTGATTGTGATATGGAACAATGTTGGGGAGAAGGGACCAGAGGAGTTGTGGAACTCCCTAGGGCCTCACCCTGTCCCCGTGAACTTCAAAGCACAGACCACAAACAGAATGAGAAATCGACTCCAGGTCTTTCCTGAACTGGAAACCAAAGCGGTGTTAATGGTAGATGATGACTTGCTGATTAGCGCCCAGGACCTTGTTTTTGCTTTTTCTGTGTGGCAGCAATTTCCTGATCAAATTGTAGGATTTGTTCCCAGAAAGCATGTGTCTACTTCCTCTGGTATCTACAGCTATGGAGGTTTTGAACTGCAGACACCAGGGTTTGGAAATGGTGATCATTACTCGCTGGTCCTGATTGGAGCCTCCTTCTTCCACAGCAAATACCTGGAACTCTTTGAGAGGCAGCCTGCAGCCGTCCATGCTTTGTTAGATGAGACGCAGAACTGTGATGACATTGCCATGAATTTTATCATCGCCAAGCACACTGGGAAGACTTCAGGGGTATTTGTGAAACCTGTAAACATAGCCAATTTAGAAAAAGAAACTACCGGTGGCTATTCTGGAATGTGGCATCGAGCTGAGCACTTTCTGCAGAGGTCTTATTGTATAAATAAGCTTGTTAACATCTATGACAGCATGCCCTTAAAATACTCCAACATTATGATTTCTCAGTTTGGTTTTCCATATGCCAATCACAAAAGTAAAATGTGAGAGTGAAACAGGCAAACAAAAACAAACCTCAGAACTGCTTGTTATTTGAGTAGCTGCTTCGTGCTCTGGTTGGTCTTTTTATTTATTTATTTTTAAGCACCATCACGGACTTTTTTTCTACTCCAGAAGTCTCTACAAAAGGGAAGAATGCATGGGGCTTCTAGGATGTACAGTTTACATGTGCTTCAAAACCCAAGAAGCTGATATTATCCGGATAGGTCTTGTGATAAGTCTTCATTCATGGATATAATTCCTTGGTCAACAATTTTATTGTTTACATGCTCAGACTGTTCGACAATTTTTTAAAATTCAAGTATAGTTGATTTACAGTGTCATGATAATGCCCTAATATTTTGTTTTTTGACTCCTGGCACTTGCCTTAAGGACCTTTAGCAAGCCGTTTCCAGGATCAAAATCTCCAGAGAAGTATTTCTCAGCTTTTTCATTCAAGGATGATTATTTTCATGTGAAGCCTGAAATGCCTCTTTCTCAAAAGACTGTGGTGTAGGGAAAAGCCATGTGAGGAGATAACAGTCTCAATCCCATATAGAAACAAGTGGAGATTTTGTGACAATCAGGGTTTCCTTTCTGGTTCTTCCAACCAGCCCTTTCTAGGACTAGCTCGTCCCAGCATGGTTTTGATGCAACCATCAGCACTTTCTGTGGTTAAGTCTGTTGTGACTGGTTGGGTTAATTTTAGTAGCTGAATGATGTCTAGTTGTTTGCTTGACTTTTGTGAACATTTACTGCATGGATCACAAAAAAGTGCAGCCTGTATTTTTTATAAGCAACTTCTATGCAGCAAGGAGTTAATGTGTTACTAGATTCAGGTCCTGCATTTTGGCACTTAATCTGGCTTTTAGATTGTACATTAATTTTTAGATTTTATATAAAAGATGTATTATTTAAGAAACATGCGTAAAATAACTCTTCTGACAGAGTGATTCAGTAAGACCAGGCAGAAATTAAAACCCTTACTATCAGATGATCTTTATTGCTATAAAAGCATAAATTATCTCATGGATACTAAAATGTTGGTGTGTGTTACACACAAAGTCAGTCTCTTGGATTCTGAATTCCCCCTCCGAGCCCCTGCTGCCAAACGATTCAGAGATCATGATTAAATTTGAATTACATAGATGTAGAAAAAAAAAAAAGACCTGAGTCATAGCAGAGAAATTCCACAGGGAGCCTGCATCAGTTCATTGTTAAGTTGCCCACTTTCATGAATGTGTGAATGAATGTTACATGAATTAGTGTCTGTTCACACTGTCTGTGTTTGGTCCTTAATTCACTAAAGGAATACTTAATTAAGCCTCTTTCCACCACATTCTCCTCTTCCTATTCCCCCTCCTTCTCCCATATTCCATAATGATCTCAAAATGGCACAGCTATGAAAATAATCATGGTTAATGTTCCAACAATGAGATCTCTTGTGCAGTTAGCTCAGTGTATATTGTTCCTTCACATGGGCATGTGTATGTGTCTTAATGCCATCTGAGAAAACCAGTAGAACTTGAAGCCTCACTAAAAATCTGTAGTGTTAATTATCTGCTTTGTCAAACCTTGGTAGTGATTTTTTTTTTTTTTTTGCCTCTTGAGATTGACAGATAAATAAAATAAACTTTTACCATCCA EMBV3_42814 CTCACTACTCATCAACGCTTGCCTCAACAAGCTGCTCCTCTACAGGGTGGTGGACAATGA Gene GeneID:523881|WDR13:NM_001075850:84_cdna Constitutive 0 NULL GeneID:523881 X GENE WDR13 MGC138915 WD repeat domain 13 EMBV3_40803 GCACACTTGCTTCAGAGCCTCCCCATCATGGTTTCATAGGGAAGGGGATGCTGACGGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22328 CATGTTGCTTGGTCTGCTCAGATTGGAGTCAAGTGTCAGTGTCCTTTCCCCTCCCTTCAG Gene GeneID:511220|ARHGEF11:XM_002686007:382_cdna Constitutive 0 NULL GeneID:511220 3 GENE ARHGEF11 NULL Rho guanine nucleotide exchange factor (GEF) 11 EMBV3_25002 TCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCT Gene BVT0102_169445 - 1 EMBV3_12600 GK000009.2:30225168-31437605 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010588 TCONS_00218178 TCONS_00238445 TCONS_00010779 TCONS_00253025 TCONS_00115687 TCONS_00152859 TCONS_00231502 TCONS_00252012 TCONS_00249921 TCONS_00165813 TCONS_00186108 TCONS_00248863 TCONS_00109859 TCONS_00209829 TCONS_00007360 TCONS_00023615 TCONS_00252354 TCONS_00057311 TCONS_00009883 TCONS_00008225 TCONS_00040835 TCONS_00218891 TCONS_00010052 TCONS_00006222 TCONS_00064811 TCONS_00251930 TCONS_00218899 TCONS_00161793 TCONS_00175545 TCONS_00055867 TCONS_00137302 TCONS_00117484 TCONS_00021596 TCONS_00065249 TCONS_00038933 TCONS_00039853 TCONS_00232349 TCONS_00249989 TCONS_00238357 TCONS_00152628 TCONS_00177280 TCONS_00020651 TCONS_00072815 TCONS_00189806 TCONS_00206861 TCONS_00064927 TCONS_00148279 TCONS_00185582 TCONS_00156997 TCONS_00007555 TCONS_00063180 TCONS_00245928 TCONS_00080765 TCONS_00020399 TCONS_00153219 TCONS_00185807 TCONS_00108589 TCONS_00124845 TCONS_00223462 TCONS_00176254 TCONS_00218943 TCONS_00056728 TCONS_00006827 TCONS_00022065 TCONS_00231487 TCONS_00198816 TCONS_00007442 TCONS_00250881 TCONS_00020016 TCONS_00064461 TCONS_00201733 TCONS_00038667 TCONS_00200536 TCONS_00166733 TCONS_00209835 TCONS_00071185 TCONS_00209098 TCONS_00031911 TCONS_00066285 TCONS_00156732 TCONS_00179470 TCONS_00019263 TCONS_00179054 TCONS_00055388 TCONS_00185876 TCONS_00251706 TCONS_00056147 TCONS_00242007 TCONS_00239418 TCONS_00116101 TCONS_00070840 TCONS_00154085 TCONS_00063487 TCONS_00250938 TCONS_00156870 TCONS_00176255 TCONS_00223365 TCONS_00020010 TCONS_00240475 TCONS_00040698 TCONS_00209529 101 XLOC_006139 XLOC_131641 XLOC_145112 XLOC_006330 XLOC_155966 XLOC_069856 XLOC_092624 XLOC_140991 XLOC_154953 XLOC_152864 XLOC_100653 XLOC_112161 XLOC_151806 XLOC_065763 XLOC_128340 XLOC_002921 XLOC_014282 XLOC_155295 XLOC_035110 XLOC_005436 XLOC_003783 XLOC_024649 XLOC_132210 XLOC_005604 XLOC_001785 XLOC_039535 XLOC_154871 XLOC_132218 XLOC_098678 XLOC_105326 XLOC_033675 XLOC_083512 XLOC_071650 XLOC_012269 XLOC_039971 XLOC_022753 XLOC_023670 XLOC_141834 XLOC_152932 XLOC_145024 XLOC_092393 XLOC_107054 XLOC_011326 XLOC_044583 XLOC_115843 XLOC_125381 XLOC_039651 XLOC_090161 XLOC_111635 XLOC_095457 XLOC_003116 XLOC_037907 XLOC_150855 XLOC_049649 XLOC_011076 XLOC_092984 XLOC_111860 XLOC_064494 XLOC_076388 XLOC_136762 XLOC_106033 XLOC_132262 XLOC_034531 XLOC_002389 XLOC_012736 XLOC_140976 XLOC_120469 XLOC_003003 XLOC_153824 XLOC_010694 XLOC_039185 XLOC_123378 XLOC_022490 XLOC_122188 XLOC_101569 XLOC_128346 XLOC_042957 XLOC_127609 XLOC_018156 XLOC_040999 XLOC_095192 XLOC_109243 XLOC_009943 XLOC_108827 XLOC_033196 XLOC_111929 XLOC_154647 XLOC_033950 XLOC_148671 XLOC_146084 XLOC_070270 XLOC_042617 XLOC_093846 XLOC_038214 XLOC_153881 XLOC_095330 XLOC_136665 XLOC_010688 XLOC_147139 XLOC_024514 XLOC_128040 Coding TCONS_00154085 XLOC_093846 NonCoding NonCoding - 26:37245076-37245743 - TSS115255 667 0.998500749625187 1 0 0.000549254447530938 0.000276241629382882 9.34307799752969e-05 2.42528326081898e-05 4.87166009139145e-05 1.85749831308269e-05 0.000105841484315034 6.92530220479067e-05 0.000254505753607672 0.000161704386407457 0.000114785503263064 9.58706715264331e-05 4.38592601312266e-05 0.000107721928297744 0.000332418309734521 0.0064042283110205 0.00156327354207931 0.00634021297496675 0.000112851621055513 0.00030995384738156 9.25436577294867e-05 0.00199609805456006 0.00738961215008013 0.00308483041721664 9.82942902767586e-05 9.84281746871299e-05 3.1703532612513e-05 0.000408554426458299 0.000415603777040472 0.000944420398370912 XM_002688053.2 LOC100337360 PREDICTED: Bos taurus rho GTPase activating protein 20-like (LOC100337360), partial mRNA. 5e-09 66.2 78.75 0.118440779610195 0 noncoding 1 1 1 1 0.00113026788455287 0.991283441018386 -0.00324262185250717 0.969712210555467 CAATTTTGTACCTTTAAGGACCCAATCTTCAGGACCCATCTTTCACTAGGGAGTGAGATTACTGGCTTGACTGCTCTCTCTCCCTTTGGACCCTCCTTTTTCTCCACCAGGTCGCCTGTGTCTCCTCCCTAACCCCTCTCTACTCTACCCAACTCTGTGAATTTCTCTGTGTTCCAGACGGTGGAGAACACTTAGGGAACTGATTACTGGCTGGATCTGTCTCCCTCCTTTTCATTCCCCCCTTTTATCCTTCTGGCCACCTCTGTTACCTTCCTCCTTCTTCTCTTCTCTGTATAACCCCGTGAACATCTCTGAGTGGTCTAGTTGTGGAGTGCACATAAGGAAGTGACTACTGGCTAGCCCACTCTCTCCACTATTGATTCACCTCATCTCATTTGGGTCACCTCTAACTCCCTCCTCCCTCTTCTCTTCTCCATGTAACCCTGTGAACCTCTCTGAGTGACCCTCACTGTAGAGAAACTTATCATCTTTAATGTAGATGTTTTATCAATGGTGCTGTATAGAAGGAGAAGTTTTGAAACTACTGTAAAAATAAGACCGATAATCGGAAGCAGGAGACTTAAGTCCAAACCCTGACTCCAGGGAACTCCTGACTCCAAGGAACATTCATTCACAGGAGCTCATCAAATGCCTCCATACCGACACT TCONS_00150957 . 3' 18339 TCONS_00150957 . 3' 19005 EMBV3_34659 GACCATATCTTTAGAAACATCCAACCATGGGTAACTTCATATGTCAAAAGCTCCAAATCC Gene BVV0102_383474 + 0 NULL GK000016.2:55938763-55959224 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069702 TCONS_00069701 TCONS_00069699 TCONS_00069700 1 XLOC_042036 Coding TCONS_00069702 XLOC_042036 Coding Coding LOC517884 16:55958903-55975530 j TSS51919 1875 1 TCONS_00069702_1 478 4 0.887465415614098 0 0 0 0 0 0 0 4.71587601094957e-22 1.90888419499173e-08 0.0134163868447099 0.00472389768126888 0.00373147222228761 0.000436109857324026 0.00226505089988326 0.00138073982197912 0.00230905085143199 0.000415797733673569 1.05286492922995e-08 0 0 0 0.000184888380623812 0.00281334496225385 0.00219232351402037 0 0 0 0.0023284768135113 0.00202624286168188 0.00264606915407192 XM_005217221.1 LOC517884 PREDICTED: Bos taurus preferentially expressed antigen in melanoma-like (LOC517884), transcript variant X2, mRNA. 0.0 3382 100.00 0.999466666666667 NM_001013407.1 PRAMEF5 Homo sapiens PRAME family member 5 (PRAMEF5), mRNA. 2e-132 477 69.09 0.639466666666667 TCONS_00069702_1 sp|Q5VWM5|PRAM9_HUMAN PRAM9_HUMAN PRAME family member 9/15; 2e-147 435 50.10 0.985355648535565 0 coding 0 0 0 0 -0.0498200770445798 0.733329848238206 0.0574944976980449 0.359181926621244 ACAGAATCTTCCAGCTCCAGAGGCACCACCTGGGCTCTCCATCATGTCTGAGATCTGAGTAGCCTGCCACCCACATAAGAGCTGTACCCACAGGATTCCTTTTGGAACCAAGTCAGGATGAGTCTCCAGACCCGACCCAGACTCTTGAACCTGGCAGCAGTGAGCCTGCTGAGGGATGAGGCCTTGGCCATCACAGCTCTGGAGTATCTGCCCATCGAACTCTTCCCCCCACTCTTCATGGAAGCCTTCTGTGGGAGTCGAAGTGAGACTCTGAAGGCCATGGTGTATGCCTGGCCCTTTGTCCGTCTGCCTCTGGGGGGCCTGATGCAAAAGCCTCACTTGGGGACCTTACAAGCAGTTCTGGATGGTCTTGATATCCTGCTTGCCCAGAAAAATCATTCCAAGAGGTGCAAACTGCGGGTGCTGGATTTAAGGAATACTGGCCAGGACTTCTGGAAAATGTGGTCTGGATCAAGTGTCCATGTGTCCTCAAGCTCATCAATGACACCAATAGCTGAGGTCAGGTCAAGGACAGAGCAGCCCTTGGCTCCTTTAGAGGTGTTCATAGAACTGCATTTCAAGGAAAGTACCATAGATGACTTCCTCATCTACCTCATTAGGTGGGTGGAGCAGAGAAAAGCTTCCATACACCTGTGCTCTAATAAGCTGAAGATCGCTTCAATGTCCTTAGAAAATATTGTGCAGGTCCTGGGTATAGTGCAACTGGACTGTATTCAGGAAGTGGAAGTGAGTTGCATTTGGCATCTGTCCACTCTGGCCATGTTTGCTCCTTTCTTGGGCCAAATGAGTAATATACAGAGACTCCATCTCTCCCACATCCATGGGCTAGCATTTGAAGAGGAGGAAGAGTATCACCATGCTGTCCAAATTACCTCTCAGTTCCGCAGGTTGTACCACCTCCGGGATCTGTATTTGGAGACTCCCTCCTTCCTTGAAGGCTGCCTGAACCAGATGCTCAGGTGCCTGATGACTCCCTTGGATAACCTTGCTATAATTCACTCTCTCCTTACGGATTCAGACTTGACCCATCTGTCCCAATGTCCAAACATCAGTCAGCTAAAGAGCCTGGATCTGACTGGTGACCTCCTGACATACGCCAATGCTGAGCGCCTCTCAGTTCTGCTGGAGAAAGTTGCAGGCACACTTGAAAAACTGGACTTAAACATGTGTGGGATTAGTGACGTCCATCTTGAAGCCATCCTGCCTGCCCTGAGCCATTGCTTCCAGCTCAAGTCCTTCAGCATGTGTGGAAACCTCCTCTCCATGGCTATCATGGAGAAGATGCTGCGACACACCTCTGCACTGCCCAGTTTAAATAAAGAGCTGTATCCTGTACCTCAGGACAGTTTGCTCTCTAGGGGACTCCATCAACCACAGAGACTTGCACAGTGTCGGGCTGAACTGTTTGAGATTCTGAAGGATTTAGGACGTCCCAGGACCATTTGGATTAGCTCTATCTCCTGTCCACAGTGTGAAGGTCATGCATTCTATCATCCTGAGCCCATTATATACCAGGGAAATATCCTTGCCTAGTTGACTGCCTATATGACAAATTTTGTTGGATACTAAAAGCTAGTACAGAGTTGCATCATAAGGGAATAGAAACTCATGGTTTCAGATACCTTCTCAATGTGAATATGAGAAGAAAAAGTGATTCAGCAAAGGTGCCGGATTGCAGAGGGAAAAGTTGATTCTGAGAGGAAAAGGGGGCTTGGAGGACAAGTGTCCTAAAGAGCCAGAAAGATGAACCTAAATTCATTAGGTGGATTTGGAGCTTTTGACATATGAAGTTACCCATGGTTGGATGTTTCTAAAGATATGGTCAAAAATAAAGAGGCTCTCAGTGTAAACTTA EMBV3_05867 ACACCCATGCGCACCCACACAGGCTGGTATTAATGGCTTTGGGGCAGATTTATAGCAAAG Gene GeneID:538516|PDLIM3:NM_001034646:76_cdna Constitutive 0 NULL GeneID:538516 27 GENE PDLIM3 MGC128819 PDZ and LIM domain 3 EMBV3_43676 CTGAGGCCCAGCTCAGAGCCTGTCTGTCCTCTGTCTTAAAAACACTTGTAAAATACCACT Gene GeneID:507899|CBARA1:NM_001075338:287_cdna Constitutive 0 NULL GeneID:507899 28 GENE CBARA1 MGC139357 calcium binding atopy-related autoantigen 1 EMBV3_12275 GACAGGCACACTCACATTTGAAGAGCAGGACTTGTGCTAACCATTCTCACATCACCAGCA Gene BVT0102_152933 - 1 EMBV3_24889 GK000002.2:52897806-53065402 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29606 AGAAAAAGGGCACTACGCAGTCCGAAGGCTGTGTGGATGCCCTCAAGCTCGATGCCTCTT Gene BVT0102_211075 + 0 NULL GK000030.2:18179313-18201691 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11777 AGCCTGGCTTGCTGCGTGACTCTACCCCTTCCCCATTATCCTCTATGCATAACTTAAGGT Gene BVV0101_009259 + 0 NULL GK000016.2:478509-519684 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09583 GTGGCAATCTGTGACCCTCTGAGACATGCAGCTATTTTTACCCACAAACTCCTCACTCAG Gene GeneID:507662|LOC507662:XM_002693347:262_cdna Constitutive 0 NULL GeneID:507662 15 GENE LOC507662 NULL similar to olfactory receptor 627 EMBV3_17228 GCTATTTTGATCTCTTCTGTGGGACTTGTGCCCTGATGGGGAATTCAAAGATCCTGCGGG Gene GeneID:788133|LOC788133:XM_002692308:3_cdna Constitutive 0 NULL GeneID:788133 13 GENE LOC788133 NULL hypothetical protein LOC788133 EMBV3_22485 TGGCCAAGTATCCAGAGTACCAGGAGAAGTGCCGAGAAGAGATCCAGGAAGTCATGAAAG Gene GeneID:100301224|LOC100301224:XM_002688557:206_cdna Constitutive 0 NULL GeneID:100301224 7 GENE LOC100301224 NULL similar to cytochrome P450, family 4, subfamily F, polypeptide 2 EMBV3_10659 GTACCCTGGCTATGGCCAGCAGCCAGCTCCTATGGCAACCAGGACCAGAGTGGTGGCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23658 CAAAGTGACTGACCTTCATTTCTAGGTTCTTCAAGAATGGTGTTAGCAAGTGCCAGATGG Gene GeneID:540660|CDC27:NM_001105428:281_cdna Constitutive 2 NULL GeneID:540660 19 GENE CDC27 NULL cell division cycle 27 homolog (S. cerevisiae) EMBV3_38497 GCCGGGCTCAGGGGTGTGGCCTGTGTGTGTCTGTGTATCAGTGACAGATTCTCCAATAAA Gene GeneID:533451|TRAPPC9:NM_001037474:110_cdna Constitutive 0 NULL GeneID:533451 14 GENE TRAPPC9 IBP MGC128657 NIBP trafficking protein particle complex 9 EMBV3_32880 TACCCACCCTGGTCTTGTTCCTTTGTGTGTAGCTCCTAATTTTCATTCCCAGGCCTTCCC Gene BVV0102_060064 + 0 NULL GK000010.2:82668259-82728772 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018108 TCONS_00018106 TCONS_00018107 TCONS_00018109 1 XLOC_009185 Coding TCONS_00018107 XLOC_009185 Coding Coding MAP3K9 10:82720991-82789414 j TSS12243 10343 1 TCONS_00018107_4 776 0.0516291211447356 10 0.848981321797083 0.00120062857100623 0.000458819803923742 1.37345180211439e-20 0.00032546866077202 0.00039863459958475 7.9312686711881e-05 2.77021953885621e-09 0.000195890675158603 0.00055937472425716 0.000145305780880437 9.13574442686347e-05 2.67683966928746e-05 1.99588898607112e-10 6.19194865312252e-05 0.000197891029308897 0.00253405936089091 0.00146475614183362 0.00347659535674783 5.97099110268247e-12 0.00037255354505379 0.000239599246788625 0.00155519909330077 6.44604698620298e-09 4.66546173035421e-08 0.000405499752263994 0.000982801190537709 0.000263305449060156 9.57286047902879e-05 0.000123098386376882 5.18233180654163e-06 XM_005212015.1 MAP3K9 PREDICTED: Bos taurus mitogen-activated protein kinase kinase kinase 9 (MAP3K9), transcript variant X3, mRNA. 0.0 5667 100.00 0.303683650778304 XM_005267683.1 MAP3K9 PREDICTED: Homo sapiens mitogen-activated protein kinase kinase kinase 9 (MAP3K9), transcript variant X2, mRNA. 0.0 4286 82.39 0.414289857874891 TCONS_00018107_4 sp|Q3U1V8|M3K9_MOUSE M3K9_MOUSE Mitogen-activated protein kinase kinase kinase 9; 0.0 1398 93.84 0.998711340206186 2 coding 0 0 0 0 0.0907638431968014 0.55325438720033 0.035445973266996 0.457671253077051 ATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCCTGCCTGGAGAATTCCATGGACAGAGGAACCTGGCGGGCTACAGTCCATGGGGTTGCAGTGAGTCGGACACGACCGAAGAAACTTACCGTGAAGTACTGATCCTCCAGAAGGTGGAGAATGGAGACCTGAGCAACAAGGTTCTGAAGATCACTGATTTCGGCCTGGCTCGGGAATGGCACCGAACCACCAAGATGAGCGCGGCCGGGACGTATGCCTGGATGGCCCCTGAAGTCATTCGTGCCTCCATGTTTTCCAAAGGCAGCGACGTGTGGAGCTATGGGGTGCTGCTTTGGGAGCTCCTGACTGGTGAGGTGCCCTTCCGGGGAATCGATGGCTTAGCAGTTGCTTATGGAGTGGCCATGAACAAGCTTGCCCTTCCCATTCCTTCTACATGCCCGGAACCTTTTGCCAAACTCATGGAAGATTGCTGGAATCCCGACCCCCATTCACGCCCATCTTTCACGAGTATCCTGGACCAGCTAACTACCATAGAGGAGTCTGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACTGCCTGCAGGATGACTGGAAACACGAGATTCAGGAGATGTTTGACCAACTCAGGGCCAAAGAAAAGGAGCTACGCACCTGGGAGGAGGAGCTGACGCGGGCCGCGCTCCAGCAGAAGAACCAGGAGGAGCTGCTGCGGCGCCGGGAGCAGGAGCTGGCGGAGCGGGAGATCGACATTCTTGAACGAGAGCTCAACATCATCATCCACCAGTTATGCCAGGAGAAGCCCCGGGTCAAGAAGCGCAAGGGCAAGTTCAGGAAGAGCCGGCTGAAGCTCAAGGATGGAAATCGCATTAGCCTCCCTTCTGACTTCCAGCACAAGTTCACGGTCCAGGCCTCGCCCACCATGGATAAAAGGAAGAGTCTGATCAACAGCCGGTCCAGCCCTCCTGCGAGCCCCACCATCATCCCTCGCCTTCGCGCCATCCAGTTGACACCAGGCGAAAGCAGCAAAACCTGGGGCCGGAACTCTGTGGTCCCCAAGGAGGAGGGGGAGGAGGAGGAGAAGAGGGCCCCCAAGAAGAAGGGACGGACGTGGGGGCCAAGTACACTTGGTCAGAAGGAATTTGCCTCAGGAGATGAAGGCCTCAAGTCCCTGGTAGATGGATACAAACAGTGGTCGTCCAGCGCCCCCAACCTGGGGAAGGGCCCGAGGAGTAATCCAGCCCTGCCAGGGTTCACCAGCCTTATGGAGATGGAGGATGAGGACAGCGAAGGCCCACGGAGTGGGGAGAGTCGTCTCCCGCCGTCACCCAGCCAGTCCTACCTCTGTATCCCATTCCCTCGCGGGGAAGATGGGGATGGCCCCCTCAGCGACGGCGGTCACGAGGAGCCCACCCCGGTCAACTCAGCCACCAGTACCCCTCAGCTGACGCCAACCAACAGCCTCAAGCGGGGCGGCCCCAACCACCGCCGCTGCGAGGTGGCTCTGCTCGGCTGCGGGGCCGTTCTCGCTGCCACGGGCCTCGGGTTTGACCTGCTGGAAGCTGGCAAGTGCCAGCTGCTGCCCCCGGAGGAGCCCGAGCCACCAGCCCGGGAGGAGAAGAAGAGGCGCGAGGGGCTCTTCCTGAGAGCCAGCCGGCCCCGCCGGAGCACCAGCCCCCCATCCCGGAAGCTCTTCAAGAAGGAGGAGCCCGTGCTGTTGCTAGGAGACCCCTCCGCCTCGCTGACGCTGCTGTCTCTCTCCTCCATCTCTGAGTGCAATTCCACCCGCTCCCTGCTGAGATCCGACAGCGATGAGATCGTGGTGTACGAGATGCCCATCAGCCCCGTGGAGGCCCCGGCCCTGAGCCCCTGCACCCGCAACCCCCTGGTCAACGTCCGAGTGGAGCGCTTCAAACGAGACCCAAAGCAGTCACTGACCCCCACCCACGTCACCCTCACGGCCCCCGCACAGCCCAGCGCTCACCGGCGGACTCCTTCCGACGGGGCCCTCAAGCCGGCTGCCCCTCCAGCCAGCAGGAGCCCCTCCTCCAGCAATGGGCTGAGTCCCAGCCCTGGAGCAGGAATGTTGAAAACCCCCAGCCCCAGCCGAGACCCAGGTGAATTCCCCCGTCTCCCTGACCCCAATGTGGTCTTTCCCCCGACCCCAAGGCGCTGGAACACCCAGCAGGACTCTACCTTGGAGAGACCCAAGACCCTGGAGTTTCTGCCTCGGCCACGTCCTTCGGCCAACCGGCAACGGCTGGACCCATGGTGGTTTGTGTCCCCCAGCCACGCCCGTAGCGCCTCCCCGGCCAACAGCTCCAGCACAGAGACACCCAGCAACCTGGACTCCTGCTTGGCCAGCAGCAGCAGCACCGTGGAGGACCGGCCAGGCCTTCCAACTCTGCTCCCCTTCCAGGCAGGGCCGCTGCCACCCACCGAGCGGACGCTTCTGGACCTGGATGCAGAGGGCCAGAGTCAGGACAGCACTGTGCCGCTGTGCAGAGCTGAACTGAACACACACAGGCCTGCCCCTTATGAGATCCAGCAAGAGTTCTGGTCTTAGCACGCAAAGGGTTGAGGGCGGGCAAGGGGGGACGCAGGAGGAGACGGGGAGGGGAGCTGGCTGGCACAGCCCTTTCTCAGAATTGGACCCCCCTGAGCCTCCCGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAGCAGGGCCCCTTCAGAGGGCTTCTCACCCTGCAGGGCCCTTCTCCCTAGGTCCGCTGGAGGGGCTGTGGCCATCAGCTCTGGCTGTGTGGGGGAGGGAGGGGTGCGTGCATGTCCCCCACCCTCCACAGTCTTCTCGCCTTCAGGGTGACTCTGCAGAGTCACTCAGCCGAATCTGCCTGCTGCTCCCTCTCTTCAGCCCCCAGGGGGTGCCCTCCTGGGGTCCCTCGGTTAGCCCTGAGTTCAGCCTTCCCACACACCCAGTACTGGATGTTCTCTGATTGATTTTGCTCCTCTTCCATGTGCTTTCCCGACACTCATGAATGAGAATCTCATTTGGTGTGAGATGTGAGCTTTTCTGCGTCCTAAGCCCTATGGTGCCGGCTGGAGAACGGAAGGCAGAGTGCCCCCTCGTTGGGCACAGGAATTGAGGGAGCTGGGACCACCTGCTGCACTTCCATGCACCCCCACTTCTTTATTTGAGCCTCCCAGTGGTACGGGACCTGCCTTCGTGAGAACTGGAAGGAGGAGGGAGTTAGGAAATACAGTCGAGTTGCAGTAAAGAGGGTCACAGAGTCTGTCTGTCCTCGTTCCTTTTATAAACACTTAAAGAAGAGCAGAAACCAGCATGTGTTGACAGCACCCATCTCCTGCCTGGGGGTCCAGACGTGGTCAGACCCGGTTCTGAATCAAATATGCACTCGTCCCAGGAATTGCCTGGGGAGGCTCAATCTCTGGTGTCAGTTCTGAAACCAGAGACAAAGTTCCTGTGTTTGCCCCTTTTGTCATCTGATCTGTATGTGTCTTCCCTTGCCTTGATCTGCCCTCCAGTCCCTGGAATTAGTGGATCTGGGGTTACATGTTTGGTGGGGAGGTATCTCTACCATGCACCAGAATAGCATGTAGAATCGGGTCCTAGACACTGGGAGTTGGAGCCGTGGGGCTTCCTGCTTGCCCGTCATCATTCTGCAATGCCCATAAAGCCAAACGAGCCCTTAGTTCCTTGCGTGAATGGATGTGGTGGGTAATGATACCTGTAAGGTGCCCTGTGAGCCCCTCATGTACCCTCATCTTCAAGTCCGAGTGTTGGAGACCGACCAGGGCTTCTTGTCTCTGTGCACAGGTAGCCCCTGCTGCTGGGCCCCAGACCGTGAGTTGGATAGGAAGGAACAGAGGCCAATCCTGGGTTTTCTGGAATTCATTTCCTTGGCTTGAATGTTGAGCTTCTGGAGCTTTCTCACACGGGTCTCCTCCCTTCCTCTTACCCTGAGGCTCCCGAGGCGAGTGTGAACAGTTGTCTTTGAGTGGGGATAACGACAGGAGTCCTTAGTTCACGCTCCTCCCGACCCAAGACTCTCTGTGTCACTCCCCCGTCGTTTATCCTGGCTGTTTCTCTGCAGGCTTTGGAGGCCCGCCTGCAGGTTCCTTGCGTTTGCTGCCCGGGCGCAGGACAGGAGAGCAGCGATGTTGGCACAAGTGATGGATTTGGTCACTGCCCTCTCTGTGACTGTGCTAGAAGTCCTGCCCTGAGGATGGCAAAATGAGTGACCTTGGTTTTCAAGTTGCTCCTTGTTTTACAAGCCCACTGGCAGGCACTTAGGTTCAAGGGCCCCACCTACTTTTGGGCGGGGAGGCACTGTTGGTTCTGTTGCCCAGGGTTCTACTGTTGCGTCTCCTTTCTCTCCGTTTCTTTGTTCAGCGAAGACAGTCCAAAGGAGGTGATTTTTGCCCCCGACCCCACTCCTTGGCTAGAGGGGGTAGGGTGGGGTGGGGGGGCAGTGCTTGAATCCCATCAGCTCAGCCAACCAAGTGACTGCTCTTCATTCTCAGATGGCCTGTGCCCTTTCTGAGGACTCTCCATGGGCCCAGGCCCTAAGCCACCTTCACATCTCTAAACCCTTGGCCCCAGTCTCTGGTCTTCTGGTGGGTGCAGCCTACAGTGTAGTCCAGACCACCCTGGCTCTGGCCAGCGCTCTGGAATGAGGCAAGGAGTCTTTGCTTATTTTCTGGTTTTTGTCGTTTTGTCTAGAGTAAACCCTTGCCACTGGGTGACAGCTGGAACCCGTCTCCTCCTCATCCACCTACCTCCTCATCCACCTAGGGGATGACAAGGGAAGGCGGGGGCTCTACTGTGGGAGGAGCTATACCTACAAGAGGCAGAAGCAGGGTTATTCCGAAGATGCTTCTGTGGGCTTCCATGACGATGGAGGCCTTTCCATCTCAGCTCCTTCAGACTGGGTCTCCGAGGGGCCCCCATCTGCCACTCCCTCTCTCTCTGGGGCAAGGCTTGGGTGGGATAGGATCCTATAGAATAAGGTTTGGGTTGCCCCCCTTTTCCCTTTCCTCGGACACTTTCCACTGCTCTTGGCGGGTGCTCCTTCATGGACGATGGTAATGGAAAACAGATACTGCTCTCTGCCCCTCTGGCTTCTTCAGTTCGTTCCACTGATTCTACATAGGATTGTCCTCTGTCCTTGAGGATCCAGGTCACTGCCAGGGGCTGAATAGATGTCCCAGTTATTTCCATATGTTATGTCTGAGAGGCTTTGAAGGATGCTCTTAGCTTCACATCCTTTAGTATCGGGAGAGTCTATTGTGATGATGATGGTGATGGTACCTGACATTTGGATGACTCAGGATAGGGCTAACCCTTCCTCCTAACCTTTACAAAAGTACGTTATTTGCCTTCTATCTTTGATATACTTGGTGGTAGAGAAAGGGAACGGAGAAGGCAATGGCAGCCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCGTCTGTGGGTTTGCACAGAGTCGGACGCGACAGAAGCAACTTAGCAGCAGTAGCAGCAGAAAAGGGGAAATGCTTAAAGATGAAGATCCAAGTGAAGAGAAGTTAATAAGCTGCTTGGACCGATTGCTGAGTTGGGCACCCGGCTCTAGGACTGAAGGCATTGGCTCTGTTCTCTGTTCTGCTTTTGCTGTCTGACCTTGGACTTGTCTCTTAGTCCCTCTCAGATTTCCTTCCTGTAAGAGCAGCCATCACCTGCTTCCCTCACAAGGGCAAAAAAGCGTGTATCAGAGCAGGTCCGAGAAGCCCGTGGCTCCCGGCCAGCGAACAGGACAAACTGCTGAAGTTGGCGGTGCGGTCCCCACCACCTCTGCCTCTAGGGGACTTGCCTACTTCCTCTGGCTTCTGGAAGAGGCAAGATTTGGAGTTGGCCTAATGACTAATGGGGACCGTGGTCAGGCACGTGCTCTTCTTTATATGGCACCTGGTGTTTAGAAGCATCACTCCTAATTCCCCCACTTAAGTCGTTAGGCTGATCATCCTACCATGAGTGTCTTATGGAGCAGGAAGTGGGAGACAGGGAGCTGGAAGCAGCACCAAAATGATGATTTAGGGCCTCTCGTTTCTTTGAGTCATTTCCCAGAGTCTGATGTGTTTTGAGGCTGGAGTCAGGCCAGTTCCTGAAACTATCTTTAGGAAAGGGTCTGCTGGCCCATAGGACACATGTCATGGTGGGGGCTTCATCACAAGACTGCTTTTCCTTTAGACCACAGTTGCTCAGGACACAAGTCACCCCAAGAGCATCTAGGCCTGATACCGTGTCTGCATTCTTGCTCACAGCGCCCCGTGGGAGACTCCTTCCCGCCCCCTCCCCTAGAAGGAAGGAACCCCATCTTGAGCATTCCTAACTCTTCAAAGTACAGAGCAGCGGGTATTAAAGGACAGCTGTGAGTGGTACCTGCAGGGTTGGTATGTCCATGCGGGTGTGGCAGGCTCCTCTGTGAATGCAGACCCTTGACCATTTCCACGCGTGTCTCATTTAGCCCACCTCTTTGACTCAGGTGTGTGAAGGCAGGTCAGAAACACTGTTGTCTCTTAAAGAATTTCGGGGAGAGGGCAGGTGCTGCCACTTCTGTAGTGCCAGGCTCTTGCGAGGTCTCTGCCGGAGACTGTGGACTGGGGTCGGGGGAAGGCCGCCCATGGTGCCTTGTAATGGAACGGGGCGGCAGGAAACTGGTGATCAGAGCTACCCACCCACTAGTGTGATGTCGCACACATCTCTCCCTCTCTCTGGATCTCTGAGCCCAGCTGTGAGCTCAGGGTGATGCTGCCTTCCCCACCTGTAGCACGAGACCCTTCTAGCTTGAAAGTCTGTAGGTCCCAGGGCCCCTGGTCCAGCACTGATAAGCCTCCCCTGGCTGGGTTGCTTCCCTTTGTGGAGGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGAAAGTCAAATATTGGCACTCTTGTGTGGTTTGACTGACTAGACCACCTGCTTCTCTCCTTGGCTTCAGGCCTGAGATGCCTACTTGTCAAGTCACAGCTATTATGAGGAACACATTCCCAAATGTCTCTCTTTGGTCAGATGTATCATTATTTTCTTAGATCAGGAATTCAAATGAGTAAAACTCCACATCAGAAGGGGAAACCCTCTACTGCTTCCGGGGAGGCCTCATTCCCTGGCTATGCCCTGGCCTTGCTGCCCAGCACCCACTACCGCAGTCACTGGCATTGGAAGGGCAGGAGGCAGAAACTGGAGTCCTGGCTGATTAAGGCTAATTAACAGGGTGGGGGTAGGTGTCTAATTAGCCTGACCTGGCCCTGCGCTTCTAGTTGGCCCTATGGCCTGGGTGAGCCTCACATTCGCTTATTTTCCATTTGTCCTGCTGCACTATTGACAGGCTCACCCCCTCCTTTGTCCATTTCAGATCTTGGGCCCTAGGGGAGCACCCTGGCCTCCAGAGGCTGCTCAGGGAGCTGTGATTCGTTCTTCTGAAGGTTGGGCTGCTCCATGACCTGGAGCCAGTAGGACTGGTCCTTCCTGATTCTTCTTGGCTGTGGTTCTCTGCATCTCCTGCCTGTGGCCTGGCTTTGGGTCTTTCACTCATGACCACAGCTGGAAATAGAGAGGTGTCTCAGGGCCCAGCTGTTGGCAGCCAGGAGCTTATCTACTCCTGTCTTTGTTTCTTTTGGGAACAGAGTTGCCTTTTCCCTGACCCAGTCTCCCTCCTGACTGGTCTGATCCACCCTCCCTGCAAACACCCACAATCTAGTTTTTCCCGCCTGATGGGCAGGCGTGAACCTGGCAACTAGATAGGAGTCTCAGGATGGACACCAGAGTACAGTGGCAGAGGTTCAGAGACAGGCCTTTCCTGTTGACTGTGCTGGGTGGACGTCCAGGAAATCAGAACCCAGAGGTCAGATTGGTTTACCTAGAGGGGTCCTGGTGGATGATGGCCCCACAGAAATAGTGGTCTTCTCTACACTTCCTGAAGTGTAAAACCAAGTTTCATAAGTATTGGGTTAGCCAAAAAGCTAGTTAGAGTTTTTCCATAAAATACAGAAAATGGGAACGAACTTTCTGGCCAGTCCAATAACCTGTTGCCTGTGTTCCTGAAATCCTTCACATCTAACTACTTGCTTTGAGAGATATGACATTTAAAAAATTTTTGATTTTATGTTCATCGTGAATTTTTCATTAATTTCAACTTTTGAAAGTACTGCTTTGAAATATGATTCATCTGGATAGCGGAGGGTTGTTTTGGTGTTTTTTGTGACCCGCTTAAATTTTACATCCAAGGCGAGTTGCCCCACCTTATCCTGGCCTGAGCTCTGCCTGCCCCTCACCTGAACACACTGAGGGCAGACCTGTGAGGTAGGCTTGGGTTTTTTCTGGTCTTCCTTCCTTTCAGGTTCTGAGTTGGATGGTGACCCTGGAAGTGTCTGCATAGGAATGTGTTGGCTTAACAGCAGTGAGACACTGAGGGCAGTTTTCAGCCTTGGCCCTGTGACTGGGGTAACTTTTCCTGGATGTCCCCTAGCTGCCTGTCAGCCTCTCTGAAACCCTGAGGTCGCTTAGAGGAGTGTAAAGGGAAGGGATTATAGTGGGAAGGATGCTTTCGAGTCTCCATCTGAAAACTCTAGGACATCTCTGAACCTGTAAAGAAGTGAATAAACCGTTCTCCCAGTTCCAGAAAGGACCAAGATGGACAGAGGCATTTTTGCTCCCTTCCACAGGCACGCCACTGCCTGGCGCTCAGTGACCTTCATGTCAGCCATCACGTCACCTCCATCGGTATCCTTTTCGCTACTGTTGTTATTCTCTGTCGTCTTTATTTTACTCTCATCATTTATCTTTCCCTCCAGTTCCAGAGGCCATGCTGGCTATGGCTCTTTGCTTCATCACTGTCAGAATGAGGCATGGGTCCATCCTGGTCTGGGTATGAGGACTAATAATAAATTATATGAAACCATTATATTTCTTCTAGGTGAGTGGTGCTGTCCTGAAAGTGTATATTCTGTTCTTTTCTTTCTTTTTGACTCACTTACCCCGGGGGTGGGGTGGGAGTACATTACCTCCAGCTAAGAATGTGGAAACCAAGGCTCAGATGGTTATAGGCCCAAGGTCACACAGCTAGGAAGGAGTGTTGCTGATCTGTTGGCTCCAAAGTCATCTCTTGTTTTCTCCTGAGCACATTTTAGGCCACTGTTTAGACACTCTGGGATAAAGTCAGCCTAGCTTAGGTCCACCATGCCTCTAAGATGGTTCTCTGTCCAAGGAGGAGTTGTCCTGTGACTAATCAACCACCAGCCTCTGAGACTGGAGACACCCAACAGGGCTTGCAATCTCCCTGGAGCTCAGTCGATCTCCTCTCTGCGCCTGCTACTTCCTTCTCCATCGTTTCCTCTTTATGATTGTTCAGGGGGTGTTGAATATGTCAGTTGCGTAGCTCTTCTCCCAGGATCGCCAAAAGCCTGTGGGCTCTCACTTCTTTTTCCAGCCCACAGTTGCCCCATGACTGACCACTCTTTACTGCAGCTTCGACCCACATCCCTCTGGGCCTCTCAAATTTGGAAGCCTTATTGTAGCTCCTCTTGGGAACTTGAAATCAGGCTTTTGTCTTTTTATTGTATCAGATCACATGCCCTTGTTACCCAGTTGTGGCAAAGAAGGAAGGTGATGAACTTGTCCACTTCTTCCTCTAATTTTCCTCACTACCCACGCTAAACACACACACTCATGCTCACACAGTCACACTCTCACACTCACACACATGTTCATACACACATACACACAGATTTAGTCTGAGACTGTATCAGTATTTTCTAGGGAGGTTAAGGAAAGGAGCTGGAGACGGGTTTTATTTAACTCACAGAAAACCTTTCTTTGGGATTTTCCTCCCCGTTAGAGCCTTTGAGTCTAGGTAAAATGGAAGTTCACATACCCACCCTGGTCTTGTTCCTTTGTGTGTAGCTCCTAATTTTCATTCCCAGGCCTTCCCTGCTCCAGTTTCCTGTCCATGTGTGCTGACCCTGTGTCCTTGAATTCCCATTTTGCTTTGGGATTTAAGTTATTGTAATTTGTCAACAATATTTAAAAATAGAAAAGTCCTGAAGGAAACTTATCAGGTTCTTTTCTTTGGCTTTTTTTTTTTTTCAAGGTACTGTAAATTGTTAACTAGGGATGCCAAGCAGGCTTGGTTCAATGGCTAAACCTCTTATCATATTACAGCGTAAGGCTGATCTCAGCCTGGTCTCACCACCAGAGCACACACAGACTTGAATAAAACTGTTACAATCATGAC EMBV3_42277 AGGTTCTCCTGGCCTCTCGGGATAGTTGTGTGGTAACTTTAGCATAATGTAGTTTGACAG Gene BVT0102_113535 + 0 NULL GK000019.2:41277260-41281906 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096921 TCONS_00096926 TCONS_00096919 TCONS_00096923 TCONS_00096924 TCONS_00096918 TCONS_00096920 TCONS_00096925 TCONS_00096917 1 XLOC_058089 Coding TCONS_00096917 XLOC_058089 Coding Coding TOP2A 19:41281013-41291628 j TSS71917 2347 1 TCONS_00096917_3 400 12 0.780007537214999 0.0037396813301746 0.00814597703693366 0.00280444912132237 0.00422785090743615 0.00391486119985392 0.00084529205542133 0.00291342569754645 0.00349556427275969 0.00389360281878445 0.00873611951950481 0.00573696579537236 0.00519755151112582 0.000607411541529538 0.00358721630532351 0.00176135786432229 0.0297403751931201 0.0212509110766715 0.0206125739038065 0.00320542358115249 0.00542583656952998 0.00299389340341091 0.0165049495034341 0.0172402233870786 0.0256297462633579 0.00318393041547759 0.00267210807086383 0.00295810954368189 0.0103356691040835 0.00420620017801603 0.00708733028149528 XM_001254457.3 TOP2A PREDICTED: Bos taurus topoisomerase (DNA) II alpha 170kDa (TOP2A), 0.0 4073 100.00 0.961653174265019 XM_005257632.1 TOP2A PREDICTED: Homo sapiens topoisomerase (DNA) II alpha 170kDa (TOP2A), transcript variant X1, mRNA. 0.0 2114 83.91 0.818917767362591 TCONS_00096917_3 sp|P11388|TOP2A_HUMAN TOP2A_HUMAN DNA topoisomerase 2-alpha; 6e-169 516 80.30 0.9975 1 coding 0 0 0 0 0.269709871868988 0.238766848654044 0.0116746261026667 0.80303009722754 CAGTTTTGACTAAAGTTAGAAGCCTCAGCTCTGGCCAGGATTAACTAAAAAAGCCAGAAAATAAGCCTAAGAAAGAGTTAATTAAAGTTCTGATTCAGAGAGGATATGATTCGGATCCTGTGAAGGCTTGGAAAGAAGCCCAGCAAAAGGTTCCGGATGAAGAAGAAAATGAAGAAAGTGACAGTGAAAAGGAAACTGAAAAGAGTGACTCTGCAACAGATTCTGGACCTACCTTCAACTACCTTCTTGACATGCCTCTTTGGTATCTAACCAAGGAAAAGAAAGATGAACTGTGCAAACTAAGAAATGAAAAAGAGCAAGAGCTAGAAACATTGAAGAGAAAGAGTCCATCAGATTTGTGGAAAGAAGACTTGGCTGCTTTTGTTGAAGAGCTGGAGGTTGTTGAAGCAAAGGAGAAACAAGATGAACAAATAGGACTTCCTGGGAAAGGTGGGAAAGCAAAGGGGAAAAAAACACAAATGGTAGAAATTTTGCCTTCTCCAAGTGGAAAAAGAGTCATCCCCCGAGTGACTGAAGAAATGAAAGCAGAGGCAGAAAAGAAAATTAAAAAGAAAATTAAGAGTGAAAATACTGAAGGAAGCCCTCAAGAGGATGGAATGGAAATGGAAAGCCAAAAACTGAGACTGGAAAAGAAACAGAAAAGAGAGCCAGTTACCAAGACAAAGAAACAAACTACATTGCCATTTAAACCAATCAAGAAAGCAAAGAAAAGAAACCCCTGGTCCGATTCAGAATCAGATATGAGCAGTAACGAAAGTAATTTTGATGTCCCTCCACGAGAAAAAGAGTCACGGAGAGCAGCAGCAAAAACCAAATTCACAATGGATTTGGATTCAGATGAAGATTTTTCAGATTTTGATGAAGACACTCAAGATGATTTTGTCCCATCAAATGCTAGTCCACCTAAGATCCAAACTTCCCCGAAACATAATAACAAAGAACTGAAGCCACTGAAGAGTGCCTCATCAGAGCTTGATGCTGATGATGCTGAGGATAATGCACCACCTCCTCCAAGCTCTCCTGCTGCAGATTTCCCAGCTGTAACTGAAACCATAAACCCTGTTCCTAAAAAGAATGTGACAGCAAAGAAGACAGCAGCAAAAAGTCAGTCTTCCACCTCCACTACAGGCACCAAAAAAAGGGCTGCACCAAAAAAAACCAAAAAGGATCCAGACTTGGATTCTGATGTCTCTAAAAAGCCTAATGCCCCCAAAACCAAGACTCGCCGCAAAAGGAAGGCGTCCTCCTCTGATGATTCCGACTCTAATTTTGAGAAACTGATCTCCAAAGCAGTCACAAGCAAGAAACCCAAGGAGGAAAGTGATGATTTCCATCTGGACTTGGACTCAGCTGTGGGTTCTCGGGCAAAATCTGTAAGAACAAAGAAACCTATAAAGTACCTTGAAGAATCAGATGAAGATGATTTCTTTTAAAATGTGAGGTGATATTTTAAGTAATGATCTTAAAGTTAGGTAAATGTCTCAATTTCCTCCCCTCTGAATTTAGTTTGGGGAAGGCAGTTTTAGTTCAGGACCATTAAAGTGAAGTATGTAGAGCCCAAGTGTCCTTTATCTCTCTGTAATACTGTATAATACTGTGACCATCTCGTGGACAGTGTTTTGTTTTCTTCTCTGCTTTGTATATGTATTTAGTCTGTTTTCTTGTCTTTTAAAGTATGATTTTAGGTTCTCCTGGCCTCTCGGGATAGTTGTGTGGTAACTTTAGCATAATGTAGTTTGACAGTTCATTAAGCTAAAATTGGAGCCCTTTGACATAAAGTTTCTACTCTGCCTACTTTCAGTAAATATGAGATAGAGCATGATTAGTTCTCTGTTTTATCTTAGTTTTATAAGTAATTTTCCATCAGATAGAACTCTATGTAGTTCCAGTTCCAAATACTCACTCAGCCTTTTATATGCTGAATTTTTAAGCAGTGAAAAATTGTTCATATTCTTCATATCCTTTTGAATAACAGCAGAAACCGTCAATAAAATGAAGAAAATTAGATCCTAAGTTGTGATTATCTCAACACTTGACTTGTCCCCTCAGATTGCAAAGGAGTCAGGAACAATATTCTCAAAGAATATTGATACTATACTCAGCAGTGAGCTTTTATATCCATTTTGGGAAATCTCCATAATTTTCCATTTATAAACTTTTCAAGACCTTCCTGCATTCATTACATGTGTGTGACTTGAGTGATGTTAATGTTTTTGTAAATATTTACTATGTTTTTCTATTTAGCTTAATTCCAACTATTTTGTACTTTAATAAAATGTTGTAAACATTGCAACCCTTGATTGTTGCCCTTATTTCACCCTGCACT EMBV3_30428 AGGAAGGTGGAGGCTCAGCGAGAACTGATTCCCAGTCCGTCCACCGAGCCAAGGAGAAGA Gene GeneID:789590|ZXDC:XM_002697153:94_cdna UTR3_Alt 2 NULL GeneID:789590 22 GENE ZXDC NULL ZXD family zinc finger C EMBV3_41413 GAAAAGGCATGGACTACCTCTTCTCCCAGCACGACCTCAGCTTCCTTGATGATGTCATTC Gene GeneID:282360|SLC4A4:NM_174605:29_cdna Constitutive 0 NULL GeneID:282360 6 GENE SLC4A4 NBC1 solute carrier family 4, sodium bicarbonate cotransporter, member 4 EMBV3_22416 CGTAATGCAGTAGGACAGAAGAATTTGGCATCCAAAACACTGGTGGATCAAAGATTCCTG Gene GeneID:506762|TMEM67:XM_002692841:217_cdna Constitutive 0 NULL GeneID:506762 14 GENE TMEM67 NULL transmembrane protein 67 EMBV3_11541 GGGGGCGGGATCCGGCTCGCCCGTCCTCAGGGTGAGGACGGGCGCATGAGGGTCCGGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32187 AAGGAATCAGCCAGTCCAGCGACCTTGAGAGGGGCCCACCAACCCCCAGTGAGGACATCA Gene GeneID:510798|TNFRSF10A:XM_002699444:153_cdna Constitutive 0 NULL GeneID:510798 29 GENE TNFRSF10A NULL tumor necrosis factor receptor superfamily, member 10a EMBV3_02024 CCCATGGCCGGTACACAAACAGTCCCTGCAATCCTACCTCCCTTCTTACTCTCTACCCTA Gene BVV0102_341388 + 0 NULL GK000019.2:36207185-36214292 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00607 GGGTGTTTCACCTTGACAGGGATCAGGAATGCTGTGTACCTCATCGACAACCTGCAGAAA Gene GeneID:613392|IL9:XM_002689203:92_cdna Constitutive 0 NULL GeneID:613392 7 GENE IL9 NULL interleukin 9 EMBV3_17592 CTGGCCGTGGGTGGCCGCGAGATCCTCAAGAATCCTGGTTTTGACTTCAGTGGAGCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22728 TGATTCCAACAGAAAGAGGTTGGAAATCTCAAGGGGTGTGTGGTCAGGGTGGTCAGTGGA Gene BVT0102_137434 - 0 NULL GK000007.2:63067367-63190541 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213876 TCONS_00213880 TCONS_00213868 TCONS_00217386 TCONS_00213869 TCONS_00213875 TCONS_00217387 TCONS_00213871 TCONS_00213878 TCONS_00213872 TCONS_00213881 TCONS_00213879 TCONS_00213870 2 XLOC_130561 XLOC_131495 Coding TCONS_00213871 XLOC_130561 Coding Coding LOC514750 7:63064748-63190516 j TSS160114 11234 1 TCONS_00213871_8 1010 0.0786896920064091 12 0.910771506038945 2.03669251656988e-25 1.16242540584222e-10 2.01413309099022e-09 7.33846113988607e-17 5.05819825984524e-14 5.24255462333714e-21 1.14918382545188e-11 2.09019100203191e-09 5.92710311379081e-15 2.35036401432947e-11 1.75463091991777e-05 6.63996151418116e-08 6.60115338025649e-38 9.62600073687379e-32 8.83652510616949e-31 0.00180424047706534 0.00326402256802545 7.52616135941432e-06 6.71935475076275e-30 5.06620652994209e-10 7.12694893399777e-17 3.66754024264389e-15 0.00166158645874258 4.42494983410761e-08 3.70875612002917e-05 1.1663704351518e-08 5.61972618862533e-08 4.97328741855846e-07 0.000168069699864323 2.75594605950075e-30 XM_003586329.2 PPARGC1B PREDICTED: Bos taurus peroxisome proliferator-activated receptor gamma, coactivator 1 beta (PPARGC1B), transcript variant X2, mRNA. 0.0 1.824e+04 100.00 0.900213637172868 NM_001172699.1 PPARGC1B Homo sapiens peroxisome proliferator-activated receptor gamma, coactivator 1 beta (PPARGC1B), transcript variant 3, mRNA. 0.0 8563 78.32 0.899857575218088 TCONS_00213871_8 sp|Q86YN6|PRGC2_HUMAN PRGC2_HUMAN Peroxisome proliferator-activated receptor gamma coactivator 1-beta; 0.0 1376 77.12 0.999009900990099 2 coding 1 1 1 1 -0.0870938681270125 0.570972545676158 -0.0206566714396341 0.761169272084707 CCCCCGGCCGGCTCGGCGCTGACTCCGCCGCACGCTGCAGCCGCGGCTGGAAGATGGCGGGGAACGACTGCGGCTCGCTGCTGGACGAGGAGCTCTCCTCCTTCTTCCTCAACTATCTCGCGGACACGCAGGGTGGGGGATCTGGGGAGGAACAACTCTGCGCTGACTTTCCTGAGCTCGACCTCTCCCAGCTGGATGCCAATGACTTTGACTCAGCCACCTGCTTTGAGGAGCTGCAGTGGTGCCCAGAGAACTCCGAAACTGACCCCAGCGAGTACAGCCCTGATGACTTGGAGCTCTTCCAGAAATGTTTATGGAGCTCCGTATGTGTGTCAGACACTGCATTCAACAGTGGACTCTACGGTCTAGAGGGAAGATTGACCCTAGATCAGATAATCGACAGTGAGAATGAGGCCCTCCTGGCAGCACTCACCAAAACCCTGGATGACATGCCTGAAGATGTTGTGAGTCTGGCTGCCTTTCCAGCCCTGGATGATGGAGACACACCCTCCTGTGCTTCTGCATCACCCATCCCCTCCTCTGCGCCCCCCAGCCCCTCTCTGGAGGGGCCCCCTGCCTCGGCCCCTGAGGTGGATGAGCTCTCGCTGATGGACGGCCCCCAAGACAGGAAGGCCCCCACGCCGCACCCTCAGAGCCGGAGCTGCACGGAGCTACACAAGCACCTCACCTCGGCACCATCCTGCCCCCGGGCTAAAGCTCTGTCCCCGGATAGAGCCCTGCAGCCACCACCATCCTTGAGTCCCCGGCTCCCCACCAAGGAGGATGAGGAGGCGGGCGAGGACTGCCCAAGCCCCCAGCTGGCTCCAGCCTCCCCCGGGGACTCACCAGCGCTGGGCAGGACAGACCCCAGCGCCCAGGTTTCCCAGGAGGACATGCAGGCCATGGTGCAACTCATCCGCTACATGCACACCTACTGCCTCCCACAGAGGAAGCTGCCCACACAGGCACCAGAGCCAGCTCCCCAGCCCAGCAGCAGCCCCGCCAAGCAGGTCCGACCCCGGCCTCGGTCCCAGCACCCTTCCAAAGCCGCCTGGACCGAGTTCTCCATCCTGAGGGAACTTCTGGCTCAAGATGTCCTCTGCGATGTCAGCAAACCCTACCGCCTGGCCACACCTGTCTACGCCTCCCTCACGCCCCGGCCCCGGCCCAAGGACAGCCAGGCCTCCGCCGGCCACCCGGGCCTCGTGGAGGAGGTGAGGGTCTCACCTTCATCCAAGAGTTCAGGGCCCAGACCCAGCCTGCGCCCGCTGAGGCTGCAGGTGAAAGGGCACGTCAGCAGGTCGGCCAGGCTGCAGCCGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAAAAGAGGAAGAGGACGAGGAGGAATGGGGCCGGAAAAGGCCAGGGCGCGGCCTGCCGTGGACCAAGCTGGGGAGGAAGCCGGAGAGCTCTGTGTGCCCCGTGCGGCGTTCCAGGAGACTGAACCCCGAGCTCGGCCCCTGGCTGACGTTCACCGATGAGCCCATGGTCCCTGCAGAGCCCCAGGGGCCTCTGCCCTCGCGCTTGGCCCCCGAAGCCTATGATGTGGAGGGGGAGCCTGGCAGCCCCACTGATGAGGACAGTGGCCAAGACCAGCTGCTCCTGCGGGGACCCCAGATCCCGGCTCTGGAGAGCCCCTGTGAGAGCGGGTGTGGGGATACAGATGAGGACCCCAGTTGCCTGCGGCTCTCTTCCAGAGACTCTCCCAGGTGCCTCATGCTGGCCTTGTCGCAAAGCCCCACCGGTGACCCTCCTTTTGGCAAGAAGAGCTTCGAGCAGACCTTGGCGGTAGAGCTCTGTGGCACGGCAGGACTCACTCCGCCCACCACGCCTCCATACAAGCCCACAGAGGAAGACCCCTTCAAGCCAGACATCAAGCACAGCCCAGGCAAAGATAGAGCTCCCACCCCAGAGGGTCCCCAGCTTGGGGCCACCGCCGAGGCTGCCCACAAGCTGCCAAAGAAGCACCCAGAGCGGAGCGAGCTCCTGTCCCACCTGAGGCATACCCCAGCCCAGCCAGCCTCCCAGGCTGGTCAGAAGCGCCCCTTCTCCTGTTCCTTCGGTGACCATGACTACTGCCAGGTGCTGAAGCCAGACGGCGCCCTGCAGAGGAAGGTGCTGAGGTCCTGGGAGCCGTCTGGGGCCCACCTGAAGGACTGGCCCCAGCCAGGGGCCCCACGGGCTGAGGCTCAGGCCGCTGGCAGGGAAGAAGACGGAAGCTGTGATGTTGGTGCCCCCACCAAAGACAGCACGCTGCTGAGAGACCATGAGATCCGTGCCAGCCTCACTAAGCACTTTGGGCTTCTAGAGACAGCCTTGGAGGATGAAGACCTGGCCTCCTGCAAGAGCCCCGAGTATGACACTGTCTTTGAAGACAGCAGCAGCAGCAGTAGCGAGAGCACCTTCCTCCTGGAGGAGGAGGAGGAGGACGACGATGAAGAAGAGGACTCGGGGGTCAGCCCCCCTCGCTCTGACCACTGCCCCTACCAGAGCCCACCCAGCAAGGCCAGTCGGCGGCTCTGTCCCCGCAGCCGCTCCAGCTCTGGCTCCTCATCCTGCCGCTCCCGGTCACCAGCCACACGGAGGAACTTCAGATGTGAGAGCAGAGGGTCGTGTTCAGACGGAACGCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAAAGGCCATTGGCGAAGGCCGCGTGGTGTACGTTCGAAACCTGTCCAGTGACATGAGCTCGCGAGAGCTGAAGAGGCGCTTCGAAGTGTTTGGCGAGATTGTGGAGTGCCAGGTGCTCACGAGAAGCAAGAGAGGCGAGAAGTATGGCTTCATCACCTACCGGAGTTCTGAGCACGCTGCCCTGTCCCTGAGGAATGGCACCGCCCTGAGGAAGCGCAGCGAGCCCTCCTTCCAGCTGAGCTACGGGGGGCTCCGGCACTTCTGCTGGCCCCGCTATACTGACTATGATTCTAATTCAGAAGAGGCCCTGCCTGCGTCAGTGAAAACCAAGTACGAAGCCATGGATTTTGACAGCTTACTGAAGGAGGCCCAGCAGAGCCTGCACTGATAACAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAAATGTTTACGTTTTCAAAGAAATTAAGTATATGAGAAGGAGAGAGAGCGAGCGCGTGAGAGAGAGAGAGAGACTCGGAACTGCTGTCCTTTTAAAAAAAAATCAATGTTTACATTGAACAAAGCTGCTTCTGTCTGTGAGTTTCCATGGTGTTGATGTTCCATTGCCACATTAGTGTCCTCGCTTCCGACGGTTGTCCTGGGTGTGCACCAGATGCTTGGTCTGGCACCCACCTCCCCTTCCTCCCCGACCGACATCCCCTCGTAGACGTGCAGCTGTGTTCACCATACCATTTCTCGTCTGTAGTGTGTGATGATGAAATTGTTACTCGTGAATAGAATCAGGATTATAAACTCACTTCTAATTGAAGAAAAAAAGTATATCCTTAAAATAATGTATTTATGGCTCAGATGTCCTGTGCCTGGGATTATTGTATTGCTTCCTTGATTTTGTTAACTATGCACTGTCATGAGGTGTTTGCCACTGACCTGCACTGCTCCCTTTACCAGAATGCCCCAGAAGTGCTGGCGGCCGGAAGCCTGGTTACCAGGGAGGAGTGGCATGCAGCCACCATCAGGAGCGATGGAGAGAGGGCCTGTTTCTGGGCCTGTTCTGCCAAGCGCTGCCTTGTCTCTCATTGAGCAAGCTGGGGTTCGTTTACAGTCGGTGCCCAGCTCACACTTAGAGTTTGTGCCTGGATATGAGTGCGCAGATCCCCTCAGACCTTGGAAAGAAGGTGGGGTGAGCTGCATTATTCCTGTTTTCCAGGTGAGGCCAGCAGTGCCCTAGGAGGCAAAATGACTTGCCCAGGATTTCACGACCTGTGAGACTATAGTGGCCCAGCCCAGGCCCCTCCTCCTGCCTTAGCTAGGGTAAAGAGGCAAAGTTGCAAGGACTGGTAGAAGTGGGTTCAACTGAAAAGTACAATAGTCTAGGCGCCTCCGGGCTCATTTTGGGGGGCAAGTTGGCAGCTCCCTTGTCAATATCGGGCAAGTTCAGGCTTTGGCACCAGTCTTGATCCAAGGGGTCCTGAGGTGTGCTTACACCTGTGGACACGCCATCAGAGCTTCAGGGACACACCTGGAGTGATACAGAGAGGTGATCTGGGAGCAGTCACCCTTTTGGGGCCAGCTACCACCTCATCCTCCTTCAGCTTGACTTCCCTTTTCTTCACCTGTGAAGTTGTTTGGGCAGCAGGGGTAATAGGGAGCAGGAGGGGATGTGAGGCATGGGGATAGAGAAGACAATCTCCAATCTCCTTTCCAACTTAGAAAACATTCTCATTGGGTTTTATTTTAAACTTTGTGTTCTTGAGCGGTATCAAAGCCATGTCCACCTTGGATGTTCAGGAGGTGCCTTGGGGGCCATTTGTGAGGGGGAGCGTGGCTAGGCAGGGTAAGAGCGCATTGCTTCAGCTTCAGACAGAGTGGCTCCAACTTGGTCTTTTTCACACATCAGAGTTCCTTGGGGAGTTTTTGTATTTGAAAGAAAAAAGATCCTGCTGCTTAAAAAAGTTTGACTTGGCTCATTTAACTAAACAAAGTGATATAATCTATTACTAATGCCAAGCCTTGTTCTTTGGCAATTGGTAGTTATGGGCTTTGGGTTTTCTATTTATGTTCTTAAGATTATAAAATACCTCAGTAGTTTAACTGGGCCAATAAACCTCTCCTGAGAGGTGAGCATACTTCAAGCCCACAGAGAAGGTTGGAGGAGACTGGCACTGGAAGAAGCAGGGAATCTGAGTTCCTGTGTATCAGGTCACTTCACCTCTCTGGACCCCAGTTTTCTTTTATGTGAAATGGACCAAGGAGGAGAATTAGGCAGGCTGATCTCTAAGGTCCCTGCCAGCTCTGACAGCTGTGGCTTCTAAGGTGGTATCTAGCAAGTACATGGCACATGGGCCACTATTCCCACATCCTTGGCCAGTTGCAGACATAACTAGTTGAGCACTGCACTCATGTTCTTTGAACTTGGTCATGTTCAACAATCCTCATCACAGTGCTCTGAGCAGTCATGACTAGTTGATCAGAGTTTAACCTATCTGACATCCTGGTGTAATCTTTGAAAGTTTTCTGTCATACAGAACCCCGTGGTGGCCCGGTTTCATGCTGGCCCATCCCTCTCTGTCGTGTCCTGATCTATGAGAGAAAATTGCCCTTAAGCCATTCCTTGGCACAGGACTCCCAGTACTACTCTGACACAATCCCGCTTGGAGGTGGGGGCCAAGAGGAATAGTGGACAGGAATATGTTTGGAGAAGGCAGGGTTTATAAGGATAGACCAGAAAGGAGACTTTCCGTGGCACGAGTCTGAACATTATAAATTCCCTTTATAGCTGTTCACTGCCTAGCACACAGTAGGCACACAGTAAATTGTTATGGGATGGGATGGAATGGAATGGAATAGAATTTAAATCCACCTGATGCCTCCCCTAACTCCTGATTTGCACTAACAAGTAAACTGAAATTTCATCCTGTGGAAAAAATAGAAAGGAACTATACATTCAGAGTGGAGAGAGCTGCGTTGAGTACTGGCTTTGCCAAGAATTAACTCTGTGACTTAAATAAGTCAGAGTCCCTTCCTCTCCCTAAGTCTCTGTGCTAGGAGGGGTTGGACTAGAAGATCTCTAAGCCTCTCCTGTTTGCTTCTTCCCTGATTGCACTAGACCAGGGGTTCTACCATGGGCAGGTGGTACCTTAGGGTGAAAAAATGCAGATTTTTAGTGAAAGACAAGTGTCTTCCCTCTACTGGGTCAGCAGAAGCCACCCTTTCACTTCAGATTAATACAAGGCACTTGAAGGTGGTCAGACGCTGGCCCTTGAGCAGAGATTTGAGTTTAGTCCTGGTACATGATATGCTTAAGGTTGGGGCTGGGGCCTGCGGATGGGAGAGGGTGTCTGCCGAGGGCATCAAGCAGTTTCTTCTCACCATCCCATACGTAAAAGGATACAAGTTCTAAAGGTGACCAACCCTGCAGACAACCTCCATCCGAAGACTCATTCGGTGCTGTGTATTATTTACCAAGGAGATTCCAAGGTCTCTCCAGGAAAACCAGTCAACCTTGGTCTCTTTCCTACCAAATTAAGGAGTCCCCCAGAGGGAGCAGCTGCCACTGGCAACCATCTCACTGTAGCTGTGTCCTAGTATCTGCTCTCCGTCATGTTCACGTGTGATTGCCATGCAAGCTTACAGTAGACTGTGTTGGTAGCCGCCCACACAAGGCAGGTTGTACTGTCTATCTCTGTGCCGTGCTGGTGTTTTCCAAATATGTTCCATCTAAATACTAAGTGGAATTCTTCCATCTCCTTCCTCAGTCGGTACAAGGCTGAATCAGAATCCTCGCTCTCGGGGGCTCTGGTTAATGAAGGAAAATGCATCAAAGAGGTAAAGAATATGAGTGGATGGAGTGCAGCTAAGGCCCTGACCCTCTTCTCCCCATCACACCTTGACCCCCAGTCAGAACACTGCTTTGAGGTATCAATACAAAGCACCAGCCAGGTGTCTGCAGCTGCTGTGAGCTCTCATAGCCCTGTGTGTGGAATGTGCTCAGGAGAGAGGTGGGGCTTTGGGAGCTCCAGGGTGGGAAGAGGAAGGGGTGGGGGATGCTCTGAACTGCAAAGACTCAGTACTCAGGTCCTTATGTGGGAAGAGATGCAATAAGAAATCTGTCTCGCCTAAAGCCTGTATTGATGTTTGGAGAGCGATTTCTTCTAGGCGTATGCAGTATGCACGCTGAGGGGACAGGGACAGCATGACAGTGCAGCCCTTCTGCATGGACAGCTTGAAACCCAATCCCAGGCCTTGGGTTCAGTTGCAATGACAGCCGAGCCCCCAGCTAGAGTGATGGGATGTCCCAGCTGTGAAGCAGAATCAACTCCAAAGGATTTGTTGATCTGACTCACTCATGTCGAAACTGCAGTCTTTTCTTACCGTTTGTGATTTAGCAATTGTCCTCAGACATGACCAAGGAAAGAAGTTGAATGTATAGTAGCAAATAAAGTGAACCTAATGGTTTCAATGGCCAAAGAAGAGGGATCCTTCCCATTGGGGCAGAAGGAAACCGGTTAGTGCTTATGTGCAATATGTTTAATCTGGGCCCCACGTCCCTGAGACGTTTGCACACATAGATAGGCTCCAGAACTGTCTGCTGAGTCCAGGGGTACAGGGTAAATGGAGGGAGAGCTCGGGAGCTGGGAAACCTTTGTGCATAGAGATGCCCTTGGCTCAAAACAGACATAGAGCGGAGGGCCCCTGGGAGCCGGCTGTAGAATGCCCAGGAAGCAGGCAGAGGCTGACTTTGCATTAAACCAATAAAAGTACTTTGAGAAACCCATGACACTAAGCCTGGCTCCATGTTTCTACACTGGCAAACATGGATCTCCCTGGGCGATGTGAGGTCGTCTCCTAGGCATTGGGACAGGGGGCCAGGAAAGGGGCTGGTGAGGGAGGAAGGCGGAGATGCCTTCATAGACATCAGCTGAGGGAGAGCCCATCCTAGGGCCAGTCCTAAAAATGGAGCAATGCTTTTTGATCTGGTACCTATTTTTGTAAAAAAAAAAAAAAAATGAAGACAGTGCAGCCAATTGAAATGGGTTTGCAGAGCAAGTCACTTACCTATAAGCCATCTAAAAGTGAGAAACCCAATGTTTCTTACTTGCTATGTGATCTTGGGCCTCTGTTTCCTCCTTTACAGACGGGAATGAGTATTGGATGGGCTGAGCACTAAAGTCCCTTTCACCTCTGATGGGCTAAGATTCCCATCCTGGAGCACCGGGAAGCCATCATTAACTCATGAAACCAATTCCATTCTCTGGCTGTGCCCAGCTCATGTTCAGGGTGAGAGTTCTCTGCAAGGTTACCAACTAGCAGGGAATTCAAATCCACATGGTCCTGGCCGAGTTACCTTATATGAGGAGGCCAGCTCCCCAGGACAGATCTAAGCCATAGTTTCTGGTGGGGATGGTGAGAAGTTAAACCCCAGTTTGGCTGGGTGGTGATGTCAGATCTCATATTAGCTTTGTCATCGTCCCCACCAAACAGCTTTCAATCTGAATGTTGTGACCTCTTGGCTGTTTCTCTCTTGCTGTCAGGCAATACTAGCAATACACTTGTTTTTGCAAAACAGCTTAACTTAGGTACTTTTCACACATTTGTTTCAAATGATTGTAAAACATACGGGGCAACAGGAGGCACGGATCACACTGCATATGTTTAGGGCAGCTTTGGTTTTTTGTTTCTTTAAGGGTGTAGCAGTGGTAGCTGAGGCTCTGAGATTTTGTGGGGCAGATTTGCAGAAAACTCCGTTTCATCAGAATGCCTTGCACATTCAGAAGCAGCACAGAAATCCAACTGCCCAAACTGGGGGCTCGGAGAATAGGGTTTTGTAGGTGGTCAGTCCCAGGGCTGTTCAATAATGCCTCCAAAAGGTGTTTTATAGCCAGGACCCCCTCTGTGCTGTATGTTTTGTCAAAGGATCCTCCAGATCTCCACTTTGCCAGCCTCGCTCATGGGTGACTTTTGAAGGGATTGGTCAGCTTCCACCTCAGCACTTTGCCTTATCAATGTCTAGTCGCCATCTAGTGGCCGAAGACTGTATCCACCAGCTACCCAGATAGAAGGCAAATAAAGCCTTTCGACCACTTTGCAGTCCAACACCAATGTTGGGAATGAAATGCAAGGACATGAGCGAACTGTCTGTGTGTTTAGAGCCCAGTGTAACACCAGTCAGAAGCCCCAGAAGCAACCACTCAGACTGAAAAATACACTAGCTCTCCTGAGGGCAGCGGAAACATGAGTGGACCTGGCCCAAGTGCCAAGGAGGGGTTTACTGTAACTGCAATACTGGCAGCCCAGCTGCTGACCTTGTTAAGTGAACCTCTGCTAGGTGGCCCCCACTGGACCCTCAGGACAAGCAGAGAGGTTGTGCGTGAGGATTCTGTGGGGGGCCTGGCCGTGGCCTTTGATATGGTCTACCGAATAGCCAAACAGCTTTTGTTTGCTTGTTTTGTATTTTGTATTTAAAAATCTTGTCAAATGTTTTTGTGTTAGGAATAAAAAGTCATAAACTACTCCCAACTTTGTTTCTTGAGGAATGTTCTGATTCCAACAGAAAGAGGTTGGAAATCTCAAGGGGTGTGTGGTCAGGGTGGTCAGTGGACCAGGGAAGTGGACCACTTGGATTTCCAAATGGTTTCAGTGGAAGATGACCATCCAGAAGTCTGACTTGGGGCATTCTGCTCCGGAAATTCACACCCACCCACCCCCTTCACCTCCGTGTGCTGCGATACTAGCATTAGCATTGGCTTGGAGCATCTGCTTCTTCCAGAGGTGGCTGCTAATGTTGAAACCAACCCAAGATTCCTCCCCCCACCCACCCCAGGTTTCTAAAGAGATGATGTCTGTAGCTAGCCTTAATTGACTGGGCAAGGTGGTCCCTATGGTCCCTTCCAGCATTTCCAAATCTTGGACTCAAATCCTTTTCTCTTGGTGTGATCATGCAGCCTAGAGAATTCTGAGCAATAGAAAGCCAGGGCTTTCCCCGGCTCTGTAACAGGGTCAAACCAGGGAATGGCTCACCTTGTGAGGTTTGGGTATCCCCAGGGGTACTACCGTAGGGGGCATTATTTATTAGGAAGCTCAACAAGGTAACTACAGCCTGGGGTGCGTGAGTGCAAGGCTGTGTGTGTGTGTGTGTCTGCACGTGTGCACACCTATGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAATTACATTGATGCATTTCTTGAGAAAGGTGCAAGAATTTCACCTACACAGAGGGACACATCTGCTTTGTTATTTATAATAGAAAGCTAAATTTTAATTTTTTAAAGGACACTGCTAATGATTGAGAATCGAGTTTTTAGTTTTGCTATTTTTTTTAATTGGTAGAGGATTTTTTATATATTTTTTCCATTTTGTTGGGTTGTGTCCTTATTTATATAAATACTTTATCCGTGAGAGGCAAGGAAGAAAACTTCTTTGCTTTTAATTATTGTGGTTGTCATCGTCCCTATTTTATTTCTGGTGTGATTTATCTCTTTTACCTTCTAAATGAGAAAATGTTTTCCTGTATTTGTACATTGTCAGATTCTATAGTTTCATAGATAATTTAACCAAATTGCTCTATGTATTATTATTCTGTGAGTATAAAGTTCTATTTTAATGTCTGTAAATACTTCAGAACTGGCTTCTTTTCTCAAACTCCACTGTGGAGTTATTGTTTACATCACAAAAACTGTAGAATCTCTATGCTCATGTACTGTAAATAGTGAAGTGATCTGCTTATAAATAAACTTAACAAATACACTATGGAGATTAAAAAGAAAATACCACCCACAGCTCTGCCCAGGTGTGTCTTTCTTTATTGAGTCCTGTGTGCTTGTTGAGTGTTGCTCTGGCTACTAAGGAGGAAAAGGCTTCTAGTTTCAGGGTCATCTCTTGAGAGAAGACCTCAGCCTAGGGTGCCTCTCCAAAATACTTTTCATGGATCACAAGGAACCATTCAGACTTGCGTCCCATAACATTGTTCCATTACCAACTTTTTGCCAGTATGACTTACAAAGCTATACCACCTTCTGAACGAGGACTCCCTTGTTTTGGTATATCTGCTTTTCCACACAAACACACTACATATATGTGCTAAAAGAGATATTTTGACATTATGGTTTCAGGCAAAGACACTTGCCAGTTGACAACTCTGAAATAGTCTCTGAACAGAGAATATGGAAAAGAGACTTGAATTGTGTACCATATTTGGGTGAACTTGAAACATTTTCCTGTGCTTACTTACTCCCAATGAGAGCAGTGAAGAGTGGCATCTTCCAGGACCTTTCACCTTGGATGTGTGTGTTATTGCTGAGAACTTGTCCTGGGTTGAGCCAAGATGGCCAGGCCTTACCTGGCATGGATCTGTCATAGGCTGCAGGCCACCACCCTCAGGCAAACTCTCCCTGAGGATGAGGTAATCCCGAAGGGACTGAGACTGAGGGCTGTCTGTTGACAGCGCTCATCACTGCTGAGACCACGGTCTTCAGTAAAGGGTCTGGGCAGCTCATCGCAGTATCCAC EMBV3_25050 CGGCCTCAATATGTGCCGCCAGTGTTTCCGCCAGTATACGAAGGACATTGGCTTCATTAA Gene GeneID:100296721|LOC100296721:XM_002695342:62_cdna Constitutive 0 NULL GeneID:100296721 18 GENE LOC100296721 NULL similar to ribosomal protein S29 EMBV3_31101 ACTTTCTCTCGCCGGGAACTTTTATACAGGCTGAGATGGAAGGGACGCCAATACACCCCT Gene BVT0102_103802 - 1 EMBV3_07852 GK000005.2:28172817-28197983 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04964 ATCCGCGAGCAGCACCCCAGCAAAATCCCGGCGCCGCCTGCAGCTCAACCCCACTCAGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43171 ACTCCCTACACTGATGCAAGGATTACAGAAACTGATGTCATGGGGCTGACTGAGTTCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09335 CTGCTTCCATGTCTAAGCAAAGAAAACTGCCTGCATATTGGTATGTCCTGGTGGGGAATA Gene GeneID:100336229|LOC100336229:XM_002696241:27_cdna Constitutive 1 NULL GeneID:100336229 20 GENE LOC100336229 NULL tyrosine 3/tryptophan 5 -monooxygenase activation protein, zeta polypeptide-like EMBV3_39945 GTGAGAGGGGTACCTCCCCGGAAGGGTTGGTCCCCTTGATACGAAGCAGACGGGTGATCA Gene BVT0102_086470 + 0 NULL GK000002.2:123245514-123350419 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00103712 TCONS_00103713 1 XLOC_062190 Coding TCONS_00103713 XLOC_062190 Coding Coding SDC3 2:123221290-123248450 = TSS76963 5095 1 TCONS_00103713_3 346 5 0.812585146728525 7.3729439504279e-09 0.000934891597203696 0.00101962425789165 0.000163274132906552 0.000786309440601317 0.000188166206352344 0.000175096462994719 0.000898300304984184 0.000244562131043187 1.50791747699065e-05 1.67736443624903e-12 3.42015588392757e-06 5.60403901887801e-06 5.18024084172766e-05 0.000689364323254505 6.91658665362314e-05 1.1440354684131e-11 9.23206836818686e-05 0.000350751729043235 0.00084021353140541 0.000248364107757028 2.04554250680324e-06 0.000114828406000341 0.000104430992989714 0.000710857877149356 0.000575729135879937 0.000599718086854165 6.88638687719682e-12 1.36180548000396e-06 0.000118413369407848 NM_001206531.1 SDC3 Bos taurus syndecan 3 (SDC3), mRNA. 0.0 3871 100.00 0.421000981354269 NM_014654.3 SDC3 Homo sapiens syndecan 3 (SDC3), mRNA. 0.0 2675 76.56 0.714033366045142 TCONS_00103713_3 sp|O75056|SDC3_HUMAN SDC3_HUMAN Syndecan-3; 1e-175 500 91.33 0.997109826589595 1 coding 0 0 0 0 -1.1059315597141 0.0867741290513785 -0.117482068041185 0.106311253543442 CTCCTGCCTCCCGCCCAGCGCTGGCGCAGTGAGAACTTCGAGAGGCCCGTGGACCTCGAGGGCTCTGGGGATGACGACTCCTTCCCCGATGACGAGCTGGACGACCTCTACTCTGGGTCGGGCTCCGGCTACTTTGAGCAGGAATCGGGCATTGAGACAGCCATGCGGTTCAGCCCAGATGTCGCCCTGGCAATGTCCACCACCCCCGCAGTGCTGCCCACCATGGACATCCAGCCTGTGGGCACCCCGTTTGAAGAGCTCCCCTCTGAGCGCCCCACCCCGGAGCCAGCCACCAGCCCCCCACTGGTGACAGAGGTGCCAGAAGAGCCCAGCCAGAGAGCCACCACCGTCTCCACCCCTACGGCTACCACCACTGCCACCACCACAGGGCCCCCGACGGTGGCCACAGTGCCCGCCACAGTGGCCACCGCCGTGCCCAGCATCCCTGCGGCGCCCCCGTCTGCGGCCACCACCTCTGTCGTAAGGACCACCGGCGTACGGAGGCTTCTGCCTCTGCCACTGACCACAGCGGCCACAGCCCGGGCCACCACCCCAGCGGTGCCCTCACCTCCCACCACGGTGGCTGTCTTGGACACAGAGGCCCCAACGCCCAGGCTGGTCAGCACAGCTACCTCCAGGCCAAGGGCCCTTCCCAGGCCGGCTACCACCCAGAAGCCTGATATCCCTGAGAAGAGCACCCTGCCCCTGGGGACCACTGCCCCTGGACCCACGGAGGTGGCTCAGACCCCAACTCCAGAGTCCTTCCTGACCACCATCCGGGACGAGCCAGAGATGCCAGTGAGCGGGGGACCCAGTGGGGACTTTGAGCTGTCAGAGGAAGAGACCACACAGCCAGACACAGCCAATGAAGTGGTGGCTGTGGGTGGGGCCGAGGCCAAGCCATCACCTCCGCCAGGGACGCTGCCCAAGGGTGCCCACCCAGGCCCTGGCCTCCTGGACAATGCCATCGACTCAGGCAGCTCGGCGGCTCAGCTGCCCCAGAAGAGCATCCTGGAGCGGAAGGAGGTGCTCGTAGCTGTGATCGTGGGCGGGGTTGTAGGCGCCCTCTTTGCTGCCTTCCTGGTCACCCTGCTCATCTACCGCATGAAGAAGAAGGATGAGGGCAGCTACACGCTGGAGGAGCCCAAGCAGGCGAGCGTCACATACCAGAAGCCTGACAAGCAAGAGGAGTTCTACGCCTAGCGGAGCCAGAGTGCCTCCCTGTAGCCTCAGCGCCACCCCTACATCCAGTCCCTGGCCTGGCACCCCCAGCCCCGGCCTGGGACTGGGCCTGGGAGACATCCTGGCCCCACTTCATCTCTGCCACCCTCCCAAGGTCTGCCCAGACTGCCAGCTTCATGCAGCTCTTCCCCAAGGGACAGGGGGCACTGCTGTCTGCTCCAGACTGTGCCCTTATGAGCTCATCACTTGTTCCACATACTCCTCCCCCCACCACCAGCTTGGGGCTTTAGGACCTCACATCAGATGGACAGGAGGAAGGGAACTCCTGATTGGCTGGTGGACGAAGGGGTGGGACTTCAGCCCCAACCTGGCCCCACGGGGCTGGCTGAGGTTTCCTTTTGGAGGCAGAGAGGCACTCCGGCTGGTTTCCAGGACAAGCATTTGGCAAGCCCAGCCCTTGAAATCGTTGGGACACTGCACCCTGTTGCTCCTGTTCCAGGCTCACTCTCTGCCTGGGTGAGACGGTACCCCTCACCCACCAGCCTGTTTTGTCCTGGCCTCTCTGGGGTTGTGGGGTCATTTTCCCTCACCTCTGCTCAATGCATATGAACCCATAGGCTTCACTTCCTTCCTGGTCTGCCCCAGCTTCCTGAGAGTGTTCTGGCAGCCACTGGTGAGGAGGGGTTTGCACCTCCTTCTTCCTAGTGGACTCTGCACAGACACTGTCTCTCACATGGTTACATGTATTGTCACACACACAGAGAAAAGCACGCAATGACAAAATCACATGCGATCTTGACCACCTGGCTAATCCAGATATGTCACAGACACACACATTCTTCCAAAGATGTTTATTCTCATGTGTTTCTTATGTGCCCTCCCCCCGCCCCAAATGCTTATGACAATGCAAGTCACTGATCATCATAACCTAATGGTAACGGTGTGGCCTGCCTCTCTCTCTGCCATCCCACCACCCCTACTCCTGCCCACCCACATACACTCTGACACCACACGTGTTGCCTCCAGCTTTCAGGCTCACTGGGGGGGGGGAATTAGGCCGAAACAATCAGCCCATATTGGGTCCCCGAGTTGCCCCATCACGCTCAGCCTTCATGACCCCTTACCAACCACATCGCCACTGAACCCCAGCGAATCAGACGCAATCCCATTTGGGTGCACAATCTCACCCACACCCATACAGCCCTGCTGTCACGCTTGGACACTTGCCTTTCCTGGAATTAAGTGTAGTGTGGGGGGCATGGCCACAAGCCCCCTCAGGGCCTTGCACACCCGCTGAACCTGGCTTCACCCTACCTGCTCCCTCCCCTCTGTAGCCTGCAAAGGGCTTGGTTGGGGGCTAAGTTCCCCACTTGCTGAGGAAAGCAGGCTGGTTCCTGGAATTCAGTCTTGGGGTGGAGAGGGGGCTTGGGTCTCCCAGGACCAAAGGCTCCTGGTGGGGAGGGGGCATGTGGTGAGGCTCCTGGTCTCCTTCCATCCTCCTCTTGCTCTGAGCTAGGGGGTCGACTCTGCCTCCCAGGACACAAGTCTCCAAAGTGCCTGTGAGGGTGGGCCTGGCGCCTGGGCCCTCTGCACCCTCTCCCTTTGGCCTCACCAGGTCCACCTCAGCCCCACCCCTGGGCCTTCTTGGGGACCTTCCGGTGGGCCTGTGCCCATGCATTTGGCCAGACAACCTGATGTTTCTGCTGGCTGCAGCAGAAGCAGTCCATCCAGACACTGTCCCTGGCTGAGGGCTGAGGACAGGGGGGGTTGGGGGTATCCCAGGCTCCAGCCCGCCTCCCTCTTCTTTGTTACCCTTCAAATGGGGCCACTTCTGTAGATATTTTAAATGTGGGGTCACAAATCTCCCAGGGGGCTGTGCTTTGAGAGGGGTCTTGGAGCCAAGGGATGTGGTCTGAGTCGTGGGTGGCTGGGGCTCACCCCTCCACCCCTTACCCACACCCTGGTGTTAAAGTCAGAAAGCCGGGTTTTATTTCTGTTCCCTTTTGAAGACTTGCTGGCGGGAGACTTCTGCAGGGTGAGGGCTGGGGGTGCCTGAGGCGGTGAGGTTCCAGGGAGCTCCTGCAGCCTGTCTTTTCTACCGTCTTCCCAGGCTGAGGCTCCATCTCTCAGACTATAGGCTACCTTGGCAAGGCCTGGAGGCTTGTGAGGAACCCCCTGGTCCGAGTCTTTGCGGGGCAGGAGCAGGGGGAGGCATCCTGGGCTCACGATCTGTTGGAGGTGACCTGGCCTCAGTCGTTCCTGGAGCGGAAGGGCTGCGGGACGAGGGAGACCAAAGCCAGCCCCAGCCTCCCCTCCCTCTACCCTGCCCCTTGGCAGGCTGCTGTCAGGGGCAGCAGCTCTGGTGAGAAGGCCTGGGCAGGCCGAGGCTGAGAAGCCAGGGAGCATGGAGGAGAGAGGACCTGGACTATCCAGGGATGCTGGGACCGGGGTTGGAGGCCCAGCAGTGGGCGTGGCCCCTGCACAGCCCCTGGTGGGGGCGGGGTCCAGCACAGAACGGCTGAGCGGGGCCTGGGCTGGCTAGAGTGGGCTCGGAGGGGCTGCATGGGTCCAGCCCGACCCCAGCAGGCCTGACTCCTCACCTTCTGTGGGCCAACCTCTAACCTGGGGCCTGGGGCTTTGCCACCCGACACCCGATGCCTCTTCTCTGCATCTTTCGCGTTGGAGAGAAGAGACTGAGGGCTTCATTCATTGAGCCCTGGCCCCGAGACAAATGTCCAGGCTTTATCTTCATGAAGTTTAAAAACAGTTGAAGTCCAGCACAGCGATCCGAGAGCAGGTGGTGAAAAGGATGAGCTGGATGTGAGTGCAGGCGTCACCCTGCCTGGACATAGGGTGTGATGCGTGCAGGGCCTGCCCAAATATGTCCCCAGGCACCCTGGTGCTCCTGGGGAGGTGTCCTGCAGGGGCCTAGTGTTTCCAGGAAACACGGCCGATTCCAAAGGAAGAGGGGCTTGTGTGCTTGACAGCCTCTCTGGGGCCTCAGCTGCCAGAGAGGACAAGGCGGGCCGGGGTCACCCCCCACCCCCAACTGTGACTTCTAGAGCCCAGGCTCTATCTCCCTAGGGGGTGAGAGGGGTACCTCCCCGGAAGGGTTGGTCCCCTTGATATGAAGCAGACGGGTGATCACTGGGGCCCAGGCCAGGCAGGTTGGTGGGCAGTGGCTTGGGGTGCTCAGGCCAGACCCACCTGGGGTTGGCAAAGCCATCTGTCCAGGCCTCCAGACTGGGGCCCTGGGCACAGGGAGCAGATGCACCTCTGCATCACAGGGCAGAAGGGGTCACCACTTCCTTGGCGCTCCTGAATTCCTTCTCCTGCCAGCCACCACCCTGGACTTGCTTCCCCAGGCCTCCTGCCTGTAAATAGAAGCCCACAAACTGTGTACAGATTTACAGAGATGCTGAGGCTGGGCCCCAGAGTCGCCATCAAAGGGCTCGTGGCCCCAGCATCTCCCGGGTGCCCAGCAGGCAGCTCAGTGCGGTGGCCCCAGTGTGGTGAATGCATGTAAATATTTTTCGTAGGCAGTGCGGCTCCAGAGAGCCCCCTGAAAACTGTGTCCCCCTCCCCGCCTCCCACCATGTCCTTTCTCCTGTATAGATCCTCCAAGAACCCAGCCTGGGGCGGGGGGAATTTGTCCTTCCCTCCCCCAGGCCTTCTCTGCCCCTTCTTCCCCCTAACCTGTTTATTAACCATACCTGTCCCGAGTTCATGGCCAAAACTTTCAGTAGGAAAAAGCGGTGGAAAAAGACTGGAAAAAGAAACCAAGGTACCTGCCCCACTGTGGGTGCTCACCTGTCCCAGCCTTGTGAAGGAACTGTTTCTTTTTTCTTTTTTTTAACACTTCCCGTGCTGTGCCCATTTATAAGAGGAAATAAAATTAAGCTGAAATGATGCA EMBV3_18395 GCGCACCTTCTCAGGCAAATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAG Gene BVT0102_199075 - 1 EMBV3_21675 GK000012.2:26001780-27400066 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177648 TCONS_00115686 TCONS_00129783 TCONS_00066283 TCONS_00231338 TCONS_00249539 TCONS_00252235 TCONS_00071860 TCONS_00230121 TCONS_00037672 TCONS_00209830 TCONS_00020157 TCONS_00220662 TCONS_00153678 TCONS_00200932 TCONS_00129573 TCONS_00175855 TCONS_00177370 TCONS_00169198 TCONS_00218945 TCONS_00250930 TCONS_00008224 TCONS_00166977 TCONS_00174963 TCONS_00107179 TCONS_00239419 TCONS_00189891 TCONS_00157439 TCONS_00189806 TCONS_00038458 TCONS_00041057 TCONS_00185881 TCONS_00109027 TCONS_00155780 TCONS_00000305 TCONS_00124585 TCONS_00251707 TCONS_00130084 TCONS_00037818 TCONS_00039226 TCONS_00178325 TCONS_00161667 TCONS_00167260 TCONS_00010054 TCONS_00065823 TCONS_00140840 TCONS_00209032 TCONS_00156838 TCONS_00110323 TCONS_00130290 TCONS_00063486 TCONS_00207365 TCONS_00057310 TCONS_00249772 TCONS_00010471 TCONS_00021595 TCONS_00157613 TCONS_00088088 TCONS_00117619 TCONS_00199424 TCONS_00136897 TCONS_00155778 TCONS_00059708 TCONS_00071033 TCONS_00161835 TCONS_00080066 TCONS_00198813 TCONS_00177281 TCONS_00170823 TCONS_00249569 TCONS_00249087 TCONS_00223554 TCONS_00070810 TCONS_00107832 TCONS_00131550 TCONS_00199037 TCONS_00110403 TCONS_00019199 TCONS_00122479 TCONS_00122686 TCONS_00157036 TCONS_00152645 TCONS_00180345 TCONS_00218178 TCONS_00249639 TCONS_00210234 TCONS_00252353 TCONS_00224113 TCONS_00197928 TCONS_00007677 TCONS_00116100 TCONS_00250720 TCONS_00169197 TCONS_00010366 TCONS_00124846 TCONS_00038381 TCONS_00152744 TCONS_00222766 TCONS_00242885 TCONS_00023373 TCONS_00252810 TCONS_00207069 TCONS_00209846 TCONS_00065476 TCONS_00209711 TCONS_00013635 TCONS_00252107 TCONS_00148280 TCONS_00040883 TCONS_00056146 TCONS_00250530 TCONS_00249011 TCONS_00176735 TCONS_00123620 TCONS_00248864 TCONS_00031939 TCONS_00131137 TCONS_00039951 TCONS_00169199 TCONS_00155779 TCONS_00142123 TCONS_00063181 TCONS_00009259 TCONS_00234065 TCONS_00252226 TCONS_00111497 TCONS_00209636 TCONS_00007431 TCONS_00222455 TCONS_00089952 TCONS_00245928 TCONS_00233372 TCONS_00218896 TCONS_00153218 TCONS_00123168 TCONS_00240534 TCONS_00085967 TCONS_00251914 TCONS_00063080 TCONS_00207755 TCONS_00199802 TCONS_00197601 TCONS_00250246 TCONS_00209558 TCONS_00238327 TCONS_00040740 TCONS_00040179 TCONS_00251804 TCONS_00064619 TCONS_00200529 TCONS_00135546 TCONS_00115148 TCONS_00221884 TCONS_00250726 TCONS_00122313 TCONS_00177995 TCONS_00020023 TCONS_00251907 TCONS_00109858 TCONS_00218898 TCONS_00007359 TCONS_00218552 TCONS_00031910 TCONS_00251929 160 XLOC_107421 XLOC_069855 XLOC_078496 XLOC_040997 XLOC_140827 XLOC_152482 XLOC_155176 XLOC_043630 XLOC_139613 XLOC_021501 XLOC_128341 XLOC_010835 XLOC_133979 XLOC_093441 XLOC_122582 XLOC_078286 XLOC_105634 XLOC_107144 XLOC_103305 XLOC_132264 XLOC_153873 XLOC_003782 XLOC_101813 XLOC_104746 XLOC_063090 XLOC_146085 XLOC_115928 XLOC_095894 XLOC_115843 XLOC_022282 XLOC_024868 XLOC_111934 XLOC_064932 XLOC_094822 XLOC_000084 XLOC_076129 XLOC_154648 XLOC_078795 XLOC_021647 XLOC_023044 XLOC_108098 XLOC_098554 XLOC_102096 XLOC_005606 XLOC_040542 XLOC_085269 XLOC_127543 XLOC_095298 XLOC_066227 XLOC_079001 XLOC_038213 XLOC_125882 XLOC_035109 XLOC_152715 XLOC_006022 XLOC_012268 XLOC_096068 XLOC_052875 XLOC_071785 XLOC_121077 XLOC_083108 XLOC_036490 XLOC_042806 XLOC_098720 XLOC_048950 XLOC_120466 XLOC_107055 XLOC_103665 XLOC_152512 XLOC_152030 XLOC_136854 XLOC_042587 XLOC_063742 XLOC_080255 XLOC_120690 XLOC_066307 XLOC_009879 XLOC_074034 XLOC_074241 XLOC_095496 XLOC_092410 XLOC_110113 XLOC_131641 XLOC_152582 XLOC_128744 XLOC_155294 XLOC_137409 XLOC_119588 XLOC_003238 XLOC_070269 XLOC_153663 XLOC_005917 XLOC_076389 XLOC_022206 XLOC_092509 XLOC_136073 XLOC_149548 XLOC_014040 XLOC_155751 XLOC_125588 XLOC_128357 XLOC_040195 XLOC_128222 XLOC_008165 XLOC_155048 XLOC_090162 XLOC_024697 XLOC_033949 XLOC_153473 XLOC_151954 XLOC_106509 XLOC_075172 XLOC_151807 XLOC_018184 XLOC_079842 XLOC_023768 XLOC_086548 XLOC_037908 XLOC_004815 XLOC_143544 XLOC_155167 XLOC_067397 XLOC_128147 XLOC_002992 XLOC_135764 XLOC_054733 XLOC_150855 XLOC_142854 XLOC_132215 XLOC_092983 XLOC_074722 XLOC_147198 XLOC_052005 XLOC_154855 XLOC_037807 XLOC_126270 XLOC_121454 XLOC_119262 XLOC_153189 XLOC_128069 XLOC_144994 XLOC_024554 XLOC_023996 XLOC_154745 XLOC_039343 XLOC_122181 XLOC_081769 XLOC_069449 XLOC_135195 XLOC_153669 XLOC_073868 XLOC_107768 XLOC_010701 XLOC_154848 XLOC_065762 XLOC_132217 XLOC_002920 XLOC_131872 XLOC_018155 XLOC_154870 Coding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_37599 GCCCTGTGTTTTTCTGTATGTGAGACCTCCTTCCACCTTACCCACTGATAAATCCTTGGC Gene GeneID:523060|LOC523060:XM_002693729:456_cdna Constitutive 0 NULL GeneID:523060 15 GENE LOC523060 NULL similar to olfactory receptor MOR231-3 EMBV3_24338 AGTGTCTGGATTTCACGGTCACTGTCCATTTCTTTCACCTCCTGGGCTGCTGGCTCTACA Gene GeneID:614236|SYS1:NM_001046527:1273_cdna Constitutive 0 NULL GeneID:614236 13 GENE SYS1 DBNDD2 MGC140251 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) EMBV3_43534 CAGGTGGTTTTCCAAGTTCCTGACTGGCTTCATCATCTCTTAATGGGAACTCGAATCCTC Gene GeneID:533801|SNX14:XM_002690203:65_cdna Constitutive 0 NULL GeneID:533801 9 GENE SNX14 NULL sorting nexin 14 EMBV3_23380 GCCGGCTCTTCACATCGAAGATCTGCCAGAAAAGGAAAAGCTGAAGATGGAAGTTGAGCA Gene GeneID:511812|GNG11:NM_001024523:36_cdna Constitutive 0 NULL GeneID:511812 4 GENE GNG11 NULL guanine nucleotide binding protein (G protein), gamma 11 EMBV3_38669 ACATGAGGAAGAACTAGAATTGGCGGTGTTGGAAGCTGGAAGCTCTGATGCTGTGAAACC Gene BVT0102_076945 + 0 NULL GK000019.2:18408201-18442077 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095441 TCONS_00095444 TCONS_00095442 TCONS_00095440 TCONS_00095445 TCONS_00095443 1 XLOC_057714 Coding TCONS_00095445 XLOC_057714 Coding Coding ATAD5 19:18409424-18445561 = TSS71151 6818 1 TCONS_00095445_9 1847 24 0.811988045162719 0.00401811173915036 0.00375817804150426 0.00302016982408338 0.00198581375591455 0.00171498227465887 0.00205933331080474 0.00139079111493741 0.00289448954581959 0.00223336121243867 0.000740308255271456 0.000593370102747822 0.000362722299633869 0.000194506350590509 0.000653370878520478 0.00114165054178252 0.00616829626648356 0.00242785672200195 0.00528269184225628 0.00307388075001267 0.00325986868616483 0.00153487590459304 0.00142067722785968 0.00173184308982481 0.00306832322493768 0.00348504567727537 0.00297343089587614 0.00257970686934951 0.000646657636162024 0.000412488257092758 0.001750180460192 NM_001206489.1 ATAD5 Bos taurus ATPase family, AAA domain containing 5 (ATAD5), mRNA. 0.0 1.064e+04 100.00 0.865209738926371 NM_024857.3 ATAD5 Homo sapiens ATPase family, AAA domain containing 5 (ATAD5), mRNA. 0.0 6367 83.77 0.864769727192725 TCONS_00095445_9 sp|Q96QE3|ATAD5_HUMAN ATAD5_HUMAN ATPase family AAA domain-containing protein 5; 0.0 2690 76.82 0.999458581483487 1 coding 0 0 1 1 0.0180435034728156 0.87590196682973 0.0716966111479662 0.183372707015627 CTGGGCCCAGCCTCTGCGACCACCCCGGGCCGTGGGCGCGGGGGAGTCCGAGGTGGACCCCGCGGCCCAGGTCCTCGCTCCTGCTGGAGTCGGCCGCCTCCATGGCCTCCCGACAAGCCGGGCAGGGCCGCTCAAGGTCCTAGGAACTGGTATTCCGGAAAGGAGGGAGCATGGTGGGGGTCCTGGCCATGGCGGCGACAGCTGCTCCCCCTCTGGTGAAGGAGTACGAGATTGAGGCATGCAAGAAGCGAAGGAAAGACGATGACAGAACTTCTTGCAGAACAATCACAAAGTATTTATCACCCGTGGGGAAGACTGGAGACAGGGTTTTCTCTCCACCCAAATCCAATAATATTCTGGATTACTTTAGAAAGACTTCATTCACAAATGAGAAGACTCAGACAACAAAAAAGTGCAAGACAAAGCCATCCACACCATTGCCTGCTGACAGTGGCAAAGACTGTTTGGAAATGCTCTCAAATACGCAGTGTAAGAAGAGAAGAAAGAGACTAAGTTTATCTCATCGACTAAGTAGTATTAAAACTGAACATAAAACTCCAATTGAAATTAACAGTGATGAGAGCAAAGAAGACTGTAGTTTAGATAATGATTTTGTGGAAAGTACTACTTCCGCTTTACTTGACAAGAAACATGTCGAGGTACTTGCAGAAAGTATTCAAAGTCTCAAAAAGCAATCAAGCACTGTGACCTCCAGAAAAAGTTCTAAGAGAGTAAATCCTAAACATGGGCCATCAAAAAAAGATCGCAGAACACTGAGAAAAAGGAAGCACAGAGAGGTCATAGATCTATCTGAAAGCTTATCCTTAGCAGAGGAACTAAATTTCCTTAAAAAAGATGGTAACGACAGTAAACAGATAAGGCCTTCCCTAACTAATGAAATCAAAAGTACTGTAAATGATGCTGAGCCTAGAGATCAAATAACTGAAATAGTCCCATTAAAAGATAGTACAATAACTGTCTCATATGAGGAATTTTTAAAAAGTCACAAGGAAAATGAAGTGGAGCAGACACCAGACTCTACAGTGTCAATTTGTATTCCTTCTGAAACTGTTGAGGATACAGTCAGAAGTGGTTCTGTGAGTGACCTTGAAACCTATGAAATTTCTCAGCAGACCCGCTTTAAGACAGTCACTGTTCTCGCGCAAGTTCACCCTATCCCCCCAAAAAAGACAGGAAAAATACCCTCCATTTTCTTGAAACAAAAGCAGGTGGAAATGGAAAGTAGTCTTTCTGATCCTGAGAATGAACAGGCAGTTCAGAAAAGAAAATCTAACGTTGTTATACATGAGGAAGAACTAGAATTGGCGGTGTTGGAAGCTGGAAGCTCTGATGCTGTGAAACCTAAATGCACTCTAGAAGAAAGACAACAGTTTATGAAAGCATTTAGGCAGCCAGTATCAGATACACTTAAAAATGGAGTCAAAAAGTCTTCTGATAAGCAGAAAGAGCTCAATGAAAAATCTTTAAATGAGGAAGAAAGAGATAATCATTCTAAAAAAGTCATGGAAAATCCTAATATCCAAATGGTTTCAAATCCTGGCAGTTCACAGCCCCACACTGATAAAGGGAGTTTTCCTAAGAAGAAAAGTAAAACACTGAAGAAAAAGAATAAAAAAGTGTTAGAGACTGTTGGTATTCCAGCTGAAAATAGAGAGGGAAATACTCAGGAAAAAGAAACAACTCTTTCCTTTAAAGAGAAGCAAAATCAAAACAGTCTTAGAATGAGTTTAAGACAAAAGAAAACAGAACTTTTCAAAAACAGCACATTATTGAACAGTGAAAGCCTTGTTTGTGAACGTACAGCAAATGATGACCCTCTAAAGATTTCCTCTCTGTGTAATAATAAGTCTTCAAAAAAAACCAGCTTACCAGTTAAGGATAAGGTTATACAATCTAAAGCTGAGACTGAAGATAGCTTGGGAAATGTTTCTACACCCAAATCAAGCAGAAGATCTGTAAGAAGTAGCAGCACGCCTGCCACAATAATCGTTCGAGGTACTGATTCTGAAGATGCGCAAGACGATAGTCCGGTCAAAGCTTCTACTCCAAAAGCAGCCAGCTTATCAGAGAAGCATCGCTTATATACAGCGGAATTAATAACAATACCTTCTGATTCAGAGAGTCCTATTAGAATGAAATTCACCAGAATTAGTACTCCAAAAAAATCTAAGAAAAGGTCTAAGAAATCTGAAGCTGCTGATGAAGATTTTGAAACTCAGACTAGAAAGGTAAGCCGTGCTTCAAAAAATGTATCAAAAGCAAAACAATTGATCGAAAAAGCAAAAGCTTTGCATATTAGTAAGTCAAAATCTACTGAAGAAGTAGTGACACCTTTAAGACGTTCGTCTAGACATCAGACGCTTCCTGAAAGATCAGAAACAGAAGACTCTGTAATAATAATAAGTTCAAGTCCTCCTCCTGTAAAGCATCCTGAGAAAAATCAGAAGAAACTTCAGTGTCTGAATGATGTGTTAGGAAAAAAACATAACAAGGCTCCTAAAAATGTCCCTGGAAAAGTGAAAGTCGCGCCTTTATTTCTTACTAGAAAGACTCAGAAGACAGCTGATCCCGCCCTTGGTTTTGATGAAAGCAGCCAAGATGCATCTGAAAAGTCTCAGGATTGTGATGTGCAGTTTAAAGCAAAGCGTGACTTCCTCATGAGCGGTTTGCCAGATTTGTTGAAACGACAAATTGCAAAGAAAGCTGCTGTGTTAGATGTGTACAATGCAGTGAGCTCCAGTTTCCAGAGAGTCGTTCATGTTCAGCAAAAAGACCATGGGTGCCATTTGTGGCATTTGAAACCACCCACTTGTCCTCTCTTAACTAAACTTAAAGAACTAAATACTAAAGTAATAGATCTCTCAAAATGTGTTATGGCTCTTGGTGAATTTTCAACATTGAATTCAAATTCGAAAAGTAATAATTCCACTGTTGGGTTTATGGGGAAAAGGAAAGATTTGACTGAAGAAGTAAGAAATCTTTTGTTGGAGGAAATTAGGTGGTCAAATCCCAGATTTCCTTTGAGGAAATACTTCTCTTTGCTTCTAAAAAAGCGAACTGAGCACCAGGTACTTTCTGAGTGTCATTGTAAACAAGAAAGTCCACAACTTGAGCCCATTGTTAGCCGAAAAGAAACCAAAAGGAAACGAGTGGAAACGGAAAATCATAAATCCAAAAGAAGGAAACCAAATGAATATTTAGAAAGTCCAAGAAAGATAAATGGGAAACCAGAAGAACTTGACAAAAGAAACAACTCCAGTGGGATAAAGCTAGATTCTTCCAAAGATTCTGGAATTGAAGACATGCTTTGGACGGAAAAGTATCAACCTCAGAACTCCAGTGAACTCATAGGCAATGAACTAGCTATAAAAAAGTTACATAGTTGGTTGAAAGACTGGAAAAGAAGAGCTGAATTGGAAGAAGGACAGAATTTGAAGGGAAAAAGAGACGAGAAACAGGAAGATTCGTTGGATAGCAGAGACTTCAAAGGCAGTTCAGATGACGAAGAAGAAAATCGCCTTTGCAATACCGTTCTTATAACAGGGCCAACAGGAGTGGGGAAGACTGCTGCGGTATATGCTTGTGCCCAGGAACTTGGATTTAAGATATTTGAAGTGAATGCCTCTTCTCAGCGCAGTGGTAGACAAATTCTGTCTCAGCTGAAGGAAGCTACTCAGTCTCATCAAGTAGACAAGCAAGGTGTCAACTCACAGAAACCCTGCTTTTTTAATAGCTACAATATCGGCAGGTCACCAAAAAAATTATGCTCCCCCAAGAAGGTTGTTACATCACCAAGAAAAATTCCTCCTCCATCACCACAAAGTAGTGGACCAAAGCGAACACTTCCACCCAGAACTTTGGCAAATTATTTTAAAGTGTCTTCTAAGCCAAAAAATAATGAACAAATAGGAGCACTTCTAGAAAATAATAAAGGAATCAAAAATTCTTTTGAACAGAAACAGATCATTCAGACTAAATCTACAAACACAACGAATTCAAATGTCAAAGAGTTTGGGGCTGAGGAACCCAACAGGAAAAATGCAACATCCCTCATTCTTTTTGAGGAGGTTGATGTCATTTTTGAAGAAGATGCTGGATTTTTGAATGCAATCAAAACATTCATGGCAACCACGAAAAGACCTGTAATCCTTACAACAAGTGATCCAACATTTAGTTTAATGTTTGATGGCTGCTTTGAAGAAATTAATTTTAATACTCCTTCACTGCTAAATGTTGCCAGCTACCTACAGATGATCTGCTTGACTGAAAATTTCAGAACTGATGTAAAGGATTTTGTAACATTGCTAACTGCAAATACTTGTGATATCAGGAAAAGTATCCTTTACTTACAGTTCTGGATTAGAAGTGGAGGTGGATTTTTAGAAGAAAGGCCATTATCTCTTTGTCGAGCAAATAGCAGAAATGTACCACCTGTTTGTTCTGAAGATGACCCTGATTCCAAAAATAACCCTAAAAATACAAAAAGGAATCCAACAGACCTTCCCAAATGTGACACTGGTTGTGCTGAGACCTTGTTCGGCCTTAAGAACATTTTTTCCCCATCTGAAGACTTATTTTCATTTTTGAAGCACAAAATCAGAACAAAGGAAGAATGGCATAAGCTCATCCACCTTCTTACAGAATTCCAAATGCAGGATGTGGATTTCTTATATAGTAATCTTGAGTTCATTCTACCACTACCTGTTGATATCATTCCAGAAGCAGAAAACTCTTCTGTTTCATCAATAAATGTGAACACCAGTGCAGCAGCAGAAAACATGAGATGTCTTGCTGGGACACCTTTTGAAGGAGAGAAGCCTTTGAAAAAGCCACCAAAAAAGAAACATAAGAAAAAGATCGTGACTTTAGATGATAGTGACTTATTTGACAGTGAATTGGACATTTCTGATGAATGTATTCGTCTTTACTCTGCATCTTCGTCAAATTTAGAAGAAAGGAAAGCCAGAGATAAAGAAAGCAATCCACAGACAAAGAAACTAAACAAATGTCTAGAGTCAAACGTTGAATCTATTCCGCGTCCTCCTACAACACCAGCAGAAAAAAAGTGTTCTGTCCTTGTTTCTCACTGTTTAAATTCTCTCACTGAGTTCATGGACAACATGTCCTTCCTAGATGCCCTTCTGATGGATGTACGAGAACAAAGGGAGTTTGGTAAAGATGATTTTGGTTGGACAAATGGAAAGGTTAAAAGTGGACTTTGTGATGAGTTTAGTCTCGAGAGTAGTGATGGATGGACTTCTCAAAGATCTGGAGAAATAAAGGCGGCTGTAGAAGCTCTCAGCTTTACTGAATGTTCTTCTGCTATTTCAAAAGCACTGGAGAAGTCGCTGAATTCTTGCAAGAAATTAGGAAGAGATCCCACAAAAGAGCTTACTTTTTATATTTCTCAAAGACGCAACAATGTACGCTTCAGTCAGTCTGCAGCTAATTTAGACAGTGCTTGGCAGAGGGTAGCAGTCATCAAAAGTGTATTTTCCAGCCGATCTCTTCTGAACCTGGGTAATAGACAAGCTAGTATAATTGAATACTTGCCAACTCTTCGAAACATCTGTAGGACTGAGAAGCTAAAGGAACAAGGAAAAAGTAAAAGAAGATTCCTGCACTATCTTGAAGGAATTCATCTTAACATTTCAAAAGAGACTATGAACACTTTGGCAGCTGACTTCCCTTAATATTCTACATTAACGATGCCTTCTACGGAGTCTCATGTGGCTCTCAAGATAAATTTTTATATTGATGTTCATGGAAGTGTTTATTTCTCTTAATGTACATTTAAAACAGACTATTTGTATATTTTTATTAGTGTGTAAATATTTAAGATGAAAAAATTGGAGTTACAAATTATATTTATAATTATGTCATGACCCTCAATCCACCTCTCTCCAACCAAGTATCAGCACCCTGTCAAATTGTGAATGTGAATCACCCAGGTGATGATATTTTTAAAAATCATCAATTTTACACAATCCGGAATATGAAATAGCATGGACAATAGTAAGAAAACTTCCAAAGAAAGAAATTATGTGTCATTTTTCAAAAAGTAAGTTTTTCCTGATAAATTTATTTTTAGTGTGCTGTCCAGGATATGTTACCATGTGAATCACTGAATACTGAGAAGGTGAAATCAAGATTATGAACTGTAGTTTTCATAAATCTTTTTGTAGCAACAGTACAAATGTGGTATCTTGTATATTTTGATAACTCAAATAATTTGTCTTGTACATTTTTCTTGTATTTTTACATCATTGATGTTTTATTTCATAAAGATATTAATATAAATATTCTGGATAAACTGCTGTTCATTCAAACTGTAACAAAGGATTCTACTCTAGGATTTCTACATGATAGCCATTTCCACTTAAGGTTATATTTTTGGAGAAAGTATCTATTTTTAATTATAAGATTTTAAAATATACAACATTTCATGTAAAATCATTTTTACAATCAGATAATCAGGTGTATCTGAAAATAGTTTCCTATTTCAAGTGTTTATATTATATATTAGCTTAATATTCAGTTACATTATCTGGAGAATTATGTTTTCACTTCAAAAGGTAAGGATCCTAATTTTCTACAGTTGAAAAACATAGACATATACCTGTGTACAAAATGTTTTTACCTCTTACAATATTTGTTCAATATATCTTTTCTTGTATTGCTAGTACATTGATTTAATTAAAGGCTAAAGGTAAGACTATGCAGTATTTAAATGGGCGTTCCAGATGAAATCATCTGGGTAGTATGGATATTGAATAGGTTTGGATATAGGCTCTAAC EMBV3_40623 TCCCCCCGATTGGCGATGGTAATAGACAACTTGCAAAAGAAAATTGATTCCTCAAGTCGG Gene GeneID:518540|MEOX2:NM_001098045:29_cdna UTR3_Alt 2 NULL GeneID:518540 4 GENE MEOX2 NULL mesenchyme homeobox 2 EMBV3_23399 TATTACAGCTCTGATGCTTCCCACGCTGGGGGATGTGGAATCACTGGTGCCTCTCTACCT Gene GeneID:523578|MOSPD1:NM_001038137:14_cdna UTR3_Alt 2 NULL GeneID:523578 X GENE MOSPD1 MGC134397 motile sperm domain containing 1 EMBV3_03475 ACTGGGCTTACTACAAGGCCAACGTGGCAAAGGCTGGCTTGGTGGATGACTTTGAGAAGA Gene GeneID:282710|ATP5H:NM_174724:332_cdna Constitutive 1 NULL GeneID:282710 19 GENE ATP5H MGC128531 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d EMBV3_02206 GGATCATCAGAAACTTGGAGGGGGACTGGGACCTGGAGCTGTCGGTGCTGTTTGTTTCCT Gene BVT0102_362587 - 1 EMBV3_28517 GK000020.2:20740982-20811832 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114759 TCONS_00114757 TCONS_00114758 1 XLOC_069345 NonCoding TCONS_00114758 XLOC_069345 NonCoding NonCoding LOC100848745 20:20783611-20811521 j TSS85503 386 1 TCONS_00114758_1 62 2 0.986240997527679 0.000465398114992189 0.00134123928990849 0.00114538134907296 0.00150833584511486 2.75431742771541e-05 0.000311301971336752 0.00165620001342604 0.000758883281098353 3.79838058037917e-09 0 0 0 0 0 0 0 0 0 0.0026327613505521 0.000365394947599938 0.000118095394835404 0.00126881948064391 0 0 0.000901372945498619 0.00160920680860378 0.00353496414585328 0 0 0 0 noncoding TCTCCCTGTTGTCCTGAGAGGTACTCTTTTCACTTAATTTACTCCAGCACCACTGGTGGTTTGCAGTTTCCAGTTTCTTCCAGCACTCCTTAGAAGCAACTTCTTTGCACCTTGTCAGAGATGCCGGCACCACCAAGCAGCAGCCTTCCCTTAGTATCTGAGAACCAGCTCCTCCAGCACTCCTCCAAGCTCCCAAGGGACCAGCAGGAAACAAACGGCACCGACAGCTCCAGGTCCCAGTCCCCCTCCAAGTTTCTGATGATCCCCAGTCTTAGTTCATCAGCAGGGTACCCACCAGGAGGGAACTAATGGCTACTACTTACAACTGCTATGGATGTGAGATCTCTTAGCTCTTATCATGTTGGCTAACATCTTCAAGAAAACAT EMBV3_03521 CTGGAGATGGGAGAGTTCTTTCAGATTCAGGATCGGCACAGACATCCAGGACAACAAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06396 ATCCAGAAACCTATTCACCCGCCTCGACCCAGGAAGCCAGAAGCAGGGTTACGGCGAAAT Gene BVV0102_102833 + 0 NULL GK000001.2:84211375-84323962 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001406 1 XLOC_000354 Coding TCONS_00001406 XLOC_000354 Coding Coding MCF2L2 1:84268032-84528536 j TSS720 6885 1 TCONS_00001406_3 1069 0.133769063180828 29 0.973681685047773 2.6286528830042e-17 0.000297405172453045 7.43622536355772e-53 4.42080342593425e-05 2.74778913584385e-05 3.43884873562479e-48 3.85487506117547e-05 4.98051864198039e-05 4.59621148955996e-06 6.22848163585271e-06 7.97564020215235e-39 5.19345131988784e-07 1.31001278823529e-06 4.82595216978208e-05 9.85722750349957e-29 1.8712373223055e-05 0 6.46692277460039e-193 5.44905682558015e-05 3.9774733396794e-05 6.72803354514547e-06 5.54851202226326e-153 0 1.55389507383984e-27 8.3833579590802e-06 5.63383270132905e-48 4.664866458167e-14 4.66513373436519e-06 1.72838231694915e-05 6.31573954353245e-05 XM_002684886.2 MCF2L2 PREDICTED: Bos taurus MCF.2 cell line derived transforming sequence-like 2 (MCF2L2), transcript variant X1, mRNA. 0.0 6637 100.00 0.534350036310821 NM_015078.3 MCF2L2 Homo sapiens MCF.2 cell line derived transforming sequence-like 2 (MCF2L2), mRNA. 0.0 3938 85.89 0.487291212781409 TCONS_00001406_3 sp|Q86YR7|MF2L2_HUMAN MF2L2_HUMAN Probable guanine nucleotide exchange factor MCF2L2; 0.0 1788 81.22 0.989710009354537 2 coding 0 0 0 0 -0.0199503847338365 0.853487455221937 0.0147040407494732 0.838806720967293 GTCCTCCGCAGCCGCCGAGTCCGCGCGCCTTTTGTGGGCTGACAGAGTATACTTCATCCCGACCCTCCCAGGAGGCAGAGCCAAAGATCGGACCTCCGATCCAGAAACCTATTCACCCGCCTCGACCCAGGAAGCCAGAAGCAGGGTTACGGCGAAATTGGGGCGACGTGCTCTTCCCACCTTCGGAACTGCTACTTTCCTGTCTCCCAAAGGCTGTCGTCGCGTTGGGAAAGCTGCTCGACATAATCTTTAAATTTACCCCCTGCGGGGCGTGGCTGGCGTCCTCTACCGTGCGGCCGTGGAGAGTTGGCCTTGACTGGGAGTGACTCTCGTTTTGTGCCTTAGGAGAGCGAGAAAGAGTGTGAGGGCCGAACATCCTTTGGAGGAGATGCCTTTAAATAGTCATCCATAGCAGCGATAAAAACAGATTTGTGTTGCTTTGTTTTGTTTATACCGAGTGGTTTTTCTGTGAAATGCTGTTTTGGTTAAAAGAAGAAATGGCCCCTCGGGAGTTCACACGGCGACTGGCCACAGTGATCACTCATGTCGATGAAATTATGCAGCAGGAAATCAGGCCCTTGGTGGCAGTGGATATAATTGAACAACTTCACAGACAATTTGCCATTCTTTCAGGAGGCCGAGGGAAAGATGGTGCCCCCATCATCACTTTTCCAGAGTTTGTGGGGTTCAAGCACATCCCAGATGAAGACTTCCTGAATGTCATGACCTACCTAACTAGTGTCCCCAGCATGGAGGCTGCCAGCATCGGGTTCGTCATTGTTATCGACAGACGAAGGGACAAGTGGAGCTCCATAAAAGCATCCTTGACACGAATAGCTGTAGCATTTCCAGGAAACTTGCAGCTCATACTCATTCTTCGTCCATCTCGATTTATCCAGAGAACATTCACTGACATTGGCATTAAGTACTATAGAGATGAATTTAAAATGAAAGTGCCGATTGTCATGTTAAACTCCGTTTCTGACCTTCATGACTACATTGACAAAAGCCAATTGACAGCAGACTTAGGGGGAACTTTGGAATATCGCCACAGTCAGTGGATAAATCATCGAACCGCCATTGAAAACTTTGCTCTAGCATTGAAGACCACTGCCCAGATGCTTCAGACTTTTGGGGCCTGCCTGGCTACAACAGAGCTGCCCAGAAGCATCCCTTCCACTGAAGACCTTCTCATGTCCCACATGAGGCAGTGGAACAAGTTGCAGGATGAGCTGAAATTACTTGGAAAGCAAGGGGCCACATTGCTGTCATGCATGCAAGAACCGGCAACCAAAAGTCCCACCAGCAAACTCAGTCTCCATGAAGTTGAGAATGTAGCTACCATGGAAAGGTTATTAGTTCAGTTGGATGAAACACAAAAAGCCTTTATTCAGTTCTGGTCTGAGCATCACCTGAAGCTTAATCAATACCTACAACTACAGCACTTTGAACACAGTTTTTGTGAGGTTAAGCTAGCCCTGGATAACTTGTTGGCGGAGCAAGCAGAGTTTTCTGACATCGGAGACAGTGTGATGCATGTGGAACAACTTCTTAAGGAACACAAAAAACTGGAAGGAGAAGGCCAGGAGTCCTTGGAAAAGGCCCAGCTGCTTGCAGTAATTGGGGACCAGCTTATCCAAAGCCACCATTATGCAGTGGACTCCATCAGACCCAGGTGTGCGGAGCTCAGGCACCTTTGTGATGACTTCATCAATGAAAACAAAAAGAAACATGACATTTTAGAAAAGTCCTTGGAGTTGCACAGAAGGTTGGACAAGGTCAGCCAGTGGTGTGAAGCAGGAGTCTACCTCTTGGCTTCCCAAGCTGTAGACAAGTACCAGTCCCGAGAGGGCATTGACATTGCCTTGAATGACATTGAGACATTCCTGGGCACAGCAAAGGAGTACCAGTTGCCCAGCTCCAAGGACTTTTACAACCAGTATGAGTTGATGCTCACTCTTGATATAAAGACTAAAGCCCAGAAAGTCCTGCAGAAGCTGAGCGATGTGCAGGAAATATTTCACAAGAGACAAATGAGTCTGATGAAACTGGCAGCCAGACAGACTCGCCCAGTGCAACCCGTGGCCCCCCATCCTGAGTCCTCCCCAAAATGGGCATCACCAAAAATCAGCCAGCCCTCCACTTTGGTTCCTCATCAGAAAACATCTGAGGAACCTTATACAGAGACAGATTTAAACTCAGAGGAAAAGGAAGATGATGAGACTAAATCTGAAGTCAAGAATGAAGAAATACTTGAAAGCAGTCATGATGCAGACAACCCTGAGCCAGAGCAGCCTGATGGTTCCAAAAATCTTTCTCACAGCAGGCATATTATACGTGACTTGGTTGAGACTGAAGTGACTTACATAAAAGAGATTAAGAACATAATTGATGGATATATCATTCCAATGGATTTTATCTGGCTGAAGCATCTAATTCCAGATGTTCTGCGGAATAACAAGGAGTTTCTCTTTGGGAACATTAGAGAACTTTACGAATTTCACAGCAGGACTTTTCTAAAAGAATTGGAAAAATGCACCGAAAACCCTGAACTTCTGGCACGTTGCTTTCTCAAGAGAAAAGAAGATCTTCAAATATATTTTAAATACCATAAGAACCTGCCCCGAGCCAGGGCAATCTGGCAAGAATGTCAAGACTGCACCTACTTTGGGGTATGCCAGCGTCAACTGGGTCACAGTCTCCCTCTTTTTAAGTGTCTGAGAGAGCCAAGTCAGAGACTTATAAAGTACCAGATGCTGTTGAAGGGGCTGCTGGATTTTGAGTCTCCTGAGGATTTGGAGATGGACCCAAGTGATCTAGAAGGAGGTTCGGCTAAGAATGGGCCAAAGAGGACCAAGGATTCAACCTTCTTAGCTGACCTACAACAGGCTTTGGCCATGATGGAGGATTTGATCAAGTCCTGTGAGTTGGCCATGGACCTGGCAGCAGTCACTGGATGTCCGGATGATATTGGAAAATTCGGCAAGTTGTTGATGCATGGTTCTTTCAACGTTTGGACAGTTCACAAAGATCGTTATAAGATGAAGGATTTAATTCGATTCAAGCCCAGCCAGAGGCAAATCTATCTATTTGAACGGGAAATAATGTTCTGTAAGATACAGTTGGAGCCCAGTGACCAGGGCCTGTCCCCTCACTACAGCTTTAAGAAGTCTATGAAGTTGATGACACTTTCAATTCGCCAACTTGGAAGGGGGAGCAACAGAAAGTTTGAAATTGCCAACCAAAATGGACTTGAAAAATACATCCTACAGGCAGCTTCAAAAGAAATCAGAGATTGTTGGTTTTCAGAAATAAGTAAATTATTGATGAAACAACAAAACAATATTAAAGACCAAGGAAATCTACAGTTTGAAGCAAGCACTAGCAAAGGCAATGAAGTGGAATTTGTACCCTGGATTGAAAATATGGAAAGAGCTACCGGTAGCAAGGAAGACTCAGTCACCAACACATGTAGGAGTCAAGGTTGCTCAAGCAGGGAGTTTATCTCCATGGAAACCTCTGTCAATTGTGAAGGTGCAGAAGATTTGGAAAAGGAGAACAGTGTCCTGAGTCTCTCGGGACTTTTCCGGTTGGACGACAGTTACGAGACCTCCACGTCTGGTCAGGAGAAGGGAGAAAGCATTCGGGGAGAGAAAAAGGGCTGTCAAAAGAAGGACACGTGAGTGGAACGCGGAAAGAAAAGTAAGCCAATTTGTTAGCAGTTGCTCCTCTGACTTTCTTCTTGGAATTTCAGGGCCACGAACAAAACTGAGGAGAGCCTTGAGACGTCTACTGGCTTGCTCGCCCCTGCGGGGAAGGCCAGTTTCCCCCGAGCAGAGGCAGTGCGGGCAGAGGCAGTGCGGGCGCAAGAAGGAAGCCTGAGGCCGCCCTCTGCAGAGAACTGACACTCGTTCCAGACCACTGAGCATCCCCGGCCGATTGTATTCCGGGGAGCCGCTTCTGTGGGCGCGGAGCAGAAGCAGCAAAGGGATCTCACAGCCCACACACAGATCCGCTGTCCTGCCGGGGGCGACTGGACCATCTTCCCGGAGCCTGAGGAGCGGTCCACGTCTGCGCGGGGAGCCTCGGGCTGTTCTACGCGCCGCCTCGCGAGCGCAGGGACTCGGAGCAGACCCCTTGGAGAACCTGCAGATGCCGCCACGCGCCCGCGCTGGGACAGGGCGCAGAGTCCGTGGAAAACCTTGCGCCCTTCTAGACGCGCCTAGAGTGTGGACTCCGCGGAGAACCTCTAACTGCTCCACATGTGCGCCTACAGAGGTTAGGGATCCAGTCCTGGAGAGCTGAGTCCAGGGTTTCTGAATGTTGGCACTTTTGACTTTAGTATAACTGCTGTGGAGGCTCTCGGGCATTGTAGAATGTTTAGGGGCATCTCTGCCCTCTATCCCCTAGATGCCAGAGGCACCTCCCACCCACTCACCGAAATTAAGACAATCAAAAAATGCCTTCAGACGTTGCCAAATTTCTGCTGGGGCGGGAGTGGAGAGCTCGGTTGAGAACCTCTGATCGGAGCCGCTCAAACTCCACAGGGCAGCCCTGCGCTCTTCTCCCTGAATCCCCACAAGAATGTTAACTGTGATATTTGTGTTACTTTGTTCCAGGGTTGTTTCCTCTTAGTGAGGGCTGGCTACAAGTTAACTTCTGAGATATTTACGTTTAGATTTATTAGTTTTTAAGTTAGCTTCATTTATTTTCAGTAATTTATTTTTAGTTTAATTAGTTAATATTCATTTTTGTTTTTAGTTTTATCTTTATTTAATTTCATAGCTTTAAAGCTACCTGTTTATAGCTATTTGGTCTTACTTAGTTCCTTAGTTTTTGAGTTATTTTGTTACTCATTTACGGTTACTTTGTTTTGAGTTATGTATTTCCAAATTAGTTACCTTTAGAATTATTTATTTTAAATTATCTATCTTTGCAATTGTTAATATCTGAGTTATTTTCATGTTTTTATTTTTAATTGTTGGCAATTTGGGGATTATTTATTTTTACAGCTACTTATTTGAATAGTAAATATTCACTTGAAGTTTTTTAATTGCTTTATTTTCAGAATAAAATACCTGTAGTTATTTTAGGGCTTTTCCCCTAGATATTTAGTTTTAGAGTTACCTATATTCACAGTAATTTATTTTCATTTATTTTAGAGTCTGGGTTATTTTTACACTCATTTGGGGGTTTTTAGTTATTAATATGTGGTTTTAAATTATTTTCAGTTGTTGCATCTTGAGCATTATATTTTGAGCTTCTTACTTTCAGAACTTTTGAGATACTTAGTTTTTGAGTTATTTTCAGAGTTACTTATTCTCAGTCGTTTCTTTTCAGTCATGTCTTTGTCATTCAAGTTTTTTTCTATTTTGTATTTTTCATTATTTTGTTTTCAGTTTTATTTACAGAATTATTAGTATTTCTTTAGAATTATTTAATCCATCAGTCAGGATCCATTCAAGAGAAACACTATAGTATACTAGTTATTTTAACAGAAAGAATTTATTTTAACAGAAAGAATTTAATATAAGGAAGTACTATCCAGGTACTGAAAATTTCAATGGGGGAAAAACAGTGATAATCAGATATCATGAAGATTTTAACTTCTCTGCTGGCATCAGGAAAGACCAAGGAGTTATGAAGATGAGTGAGAGGTTCCTGGGTCCAGTTGGGGGAGTCAGATGTGGAAATAGGTGATCACAACACAGTGTGTGACACACAACTCTGCCGCTATGTGATGAGGCCGTGTTTGGAAGATGGTAAACTGCTGCTACTGCAAGGGAAATGCAATTTTGAAATTTTTAGACTTCTTAAAAACCAGAAAAATAATAGAGGCTGAATCTTCTGTGAATGAGATTTGTGTCATCTTTCTATTTGGGTAAATGAAAAGAACTAAAACCTTCAGGTAAATCCTTCAGCCTCCTTTTATGAATACTAGTTGCTCAATACCCATTCCAGTGTTCTTGCCTGGAGAATCCCAAGGATGGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAAAGTCAGAAACCACTGAAGCAACTTAGCAGCAGCAGCAGTTGCTCAATTAATCATGTCCCCTGTTGCCCACTAGAGGTCTTCATTTCAGCAGGTTGCTTAGGAATGGGAATTCTGTAGCCCCAGTCAAAGTGCTCTGGTATAGGAACTGTAAAATCTGGCCAGAGTCTGTGTCCACAGTAAAGAACAACCAGGCATTATGAAATTATTAGAAAAGTTAGAGATATTCTAAACCAGCATTTCCCAGAGTGTATTTTGCAGAATAGGCAGAAGAATGTTAGAGTTCAATGAGTTAATCCCACAATGAAAAAGAATTATGTAAAAATAAATATACTTTACAAGTAGTACATATTACTGTCTTGGTTGATCCCAACTGGTAAATTAAAGGAGCTGAGAACTCTTTCAGGACCAAAGTCTGTATATTTTTGTTAAACTCATGATTTCCCAAACTTATTTGACCACAGAACCCTTTTCTTTGTGAAATATAACATCCAATATGTATTAGTAAAAGGAAAGACTTTGCTATAACAAAGAGATCCAACAATATATTGACTAAAGAATATTTCCGTCTGTGAAACAGCCTGAGTTGAGCTTGCAGTCTACTCTGCTTCACATGGTCATTTATTGTCCCAGGTTCCTCCTTTCTGGTTTTCTACCATCCCCTAGAGCATTGTCTTTGTCTACACAGTCAAAAGCAAATTTCAAGAATGTCCAGCTTCCATCCTGCAGGAAGGAAAAAGAACTTGGGAGATATATGTATAAGCAATGTTTTAAGGCCCAGCCTGCAAGTAGCACACAAAACATTTTCTTATATTCCCGTAGTGAAAGCTATGTTGAATGGCCACACCAAGCTCCAAAAGG EMBV3_37666 ATCAACTCTCCCTCCAGTGAATTTTTCAATACTTGCCTTTCTGGGTGAAGGAAAAGGCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15687 CACCTGAACTAAGTACTTTCATAGGCAACACCATCCCCTTTACCTGCTACAACTACAAAG Variant GeneID:539566|NIPBL:XM_002696375:86_cdna 484^585 1 EMBV3_04247 GeneID:539566 20 GENE NIPBL NULL Nipped-B homolog (Drosophila) EMBV3_41426 AGTTCGCAAGAGACGAGTTGAAGGAGACCACCAGTAAGTCTGCCAACCTGTCATATTTGG Gene BVT0102_053718 + 0 NULL GK000010.2:58543476-58576206 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017394 TCONS_00017396 TCONS_00017392 TCONS_00017397 TCONS_00017395 TCONS_00017393 1 XLOC_009020 Coding TCONS_00017393 XLOC_009020 Coding Coding TMOD3 10:58537625-58646721 = TSS11893 3291 1 TCONS_00017393_2 156 10 0.969925294468124 0.00153459907584584 0.00124950841291998 0.00192276173585524 0.00123986115458609 9.75684307308827e-05 1.79007597722834e-05 0.00158866960349388 0.000688447459047468 0.00309445395474684 0.00161891758382671 0.000943611492384464 0.000712546143122371 0.000220880819238458 0.000381505325810812 0.000733591675847188 0.0314647377120704 0.0122730048542496 0.0326520562701263 0.0060739824534818 0.00124148871168108 3.51159217382557e-10 0.01068384647415 0.00674146143701829 0.012052174699351 5.8827662473423e-08 0.000470720184401265 4.74569062725221e-08 0.00205485167828741 0.00159869940625526 0.00474310580013282 NM_001075987.1 TMOD3 Bos taurus tropomodulin 3 (ubiquitous) (TMOD3), mRNA. 0.0 5039 99.82 0.852932239440899 NM_014547.4 TMOD3 Homo sapiens tropomodulin 3 (ubiquitous) (TMOD3), mRNA. 0.0 1121 74.52 0.540565177757521 TCONS_00017393_2 sp|Q9JHJ0|TMOD3_MOUSE TMOD3_MOUSE Tropomodulin-3; 3e-52 173 91.21 0.576923076923077 0 coding 1 1 0 0 0.585537976798846 0.240422818856999 0.0616428924248827 0.335541024606033 AGTCCCCGCAGGTTTGTGAAGGAGGTCGGTGGCCGCAGCGGACGCCAGTCAGTTTTGAGGGAAAAAATCACTTCTCAGTGTACTGGATAGCAAAAATTAAGTGACTTCCTCTACTGCAAACCATGGCACTGTCGTTCCGGAAGGACTTAGAAAAATACAAGGATCTGGATGAAGACGAACTCCTTGGAAATCTGTCAGAAGTAGAACTGAAACAACTGGAAACTGTTCTGGATGATCTTGACCCTGAGAACGCCCTTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACATCAAAGTCTGCCACAGGGCCATTTGATCGAGAACACCTCCTTTCATATCTGGAGAAGGAAGCTTTGGAGCATAAGGACAGGGAAGACTATGTGCCCTACACTGGAGAAAAAAAAGTTTAAGTTAATTAAAATTAAAGCTTTTGCAGATATGCTAAGAGTGAACAAAAATTTGAAGAGCTTAAATATGGAATCCAACTTTATTACAGGAGTTGGGATTCTAGCACTGATTGATGCTTTGAAAGAGAACGAAACCCTGATGGAGCTGAAAATTGACAACCAGAGGCAGCAGCTGGGGACAGCTGTAGAATTGGAAATGGCCAACATGCTTGAGGAAAATACCAATATCCTTAAATTTGGATATCAGTTTACTCAGCAAGGACCCCGAACCAGGGCAGCTAATGCAATAACTTAAAACAATGACTTAGTTCGCAAGAGACGAGTTGAAGGAGACCACCAGTAAGTCTGCCAACCTGTCATATTTGGAAGACATTGAAAGGTCATCGAGGGTTCTTGTGATATCAGATGTAAAATTTTCCTGGGGAGAAGGGAAAAGACTGGAAATTTTTTTTTTAATTACATGTATCTTTTTTCTAGTTTAAGGTTGTTACCAGTTTCAAACTGCAAAATCAATAGTAGGTGATATTTTGTATACTAAAGCATTATTTGTGCTAAAATTGATTTTAATTTAGCTTAATTAAATGTTCTGTGATGAGTTGGGTTAAAAAAAATACAGTTGTAAAAAAGTTTAGTAAGTCATTTATGTAGAATAATATGAACATTTTAAGGACCAATATTTTTTAAGTCAAAAAGGGACATTGCTGATGTCAGAACTGCTGTCGTACTTCTTAGGTACAAGGCACTTCAAAGCTTTCCTCATTCCATGGCATGGAGACTTTTCCGTGTTTTCTAGAACACACACACTTCTTTCTTGCAAAAAGCAAAATGCCAACATCTTAAAACAGATGACTTAAAACTTGGTCATCTGTCTTAGAGTCAAAGCAGGTTTCCAGGCGAGAGGAAGTGGTCTCCTGTGCCTCCCCACACTGCACCTGTCTGAGGTGTCTCAGCACCTACAGTTTTTTTAAACAAAGTCATCATCTTGGCTAGGTTACACACTTGGTTTAAAAAGTAGCTATGTCTAAATTCATTACAGACTTTCATTTTAATAATGTGGGCATTATTAAATTTTTGTGAAAGTTCATAGTAGAAATAAAATCTTGAGTAGGAAAGCTATTTTCTTCCCTGTAAAAGGCATACAGCTAACTAACTCTGTTATTTAAGGTTAAAAAAAAAAAAAGCTGTTGTTAAACACATGAAATCAGACTTATTAAATGGTGGAGATTAAGTCTCAGGAGCATGCAGAACAGTCCTTTAAATTGATGGTTACTGTAAAGTAAATCAGAAGCTGACCTGTGTATAAATTAAGAGTTTACACAGGATAGTGAGATGTTCCTGTATGCAGTGCAGAGTTGTCTGGTTGGTATACAATCACCCCTTACTACAGATTCTCCAACCAATAAGGAAAATGACTATTCTTGATAAATCTAATTTTTATTAACTGTTTCCTTTCATCTTGAACTTTTTGGTCCATACTGTATAAAAGTAGTTTCTCATAACAAGATGTCTTCCTGTCACTCAGAGTATTAAAGTGAGTGGTTGAACAGTGTAGCGTGGTGGGCAGGCCGCTCCAGGTCCAGTAGTGTGACAGACCATGTGGACCTGTATTCATGCCAGGTTCCAGGGCAGTCCCGGGAGCAGGAGGTGGCAGAGGCCGTACAGCTACAGAGGACAGGGCACGAAGGAATCTGAACAATTCAGGCCTGGCTGTGTCACTTACAGGGAGATTTTTCTAAAGGGAGGAATCTCTTTCCAGAATAGGGGAGAGATGTGTTCTCAATTTTTTTTTAAACTTCTTGAAACCAAATTATAAAATGTCTGCTCCTTTGTCTTGGACTAGTCAGTTTGTCTCGAGCTAGATGGCTCCCTGTATGCTATAGAAATAAGTCTTCTTGACAGGTGAAAGCTTTCCTCATAAGGACTGAGTGTGAGTTTCTTTGGAATCAGTATCCAGTGTTTGAAAGGGGCCAAAGATTGACTTTGCACTGTTCCACTATTCCCTTTTGGTTATAGGGTGCTGGAGACTTTTTTTTTTTTCAAGTTAGCAAGTCAGGCTCACTCTCACTGGCTCTCCCTCTCTCCTTTTTCATAAATGACTTTGGAAATGTACTTGATTTTTAGAGACTGCACAGTTCCAACAGAGGGGGGAGTTGGCATGGACCAAGAGTTCAGAGCCGCCAGAACACTTTTAGCAAGGCTTCCTTTTTTGCCCTGCCCTGTAAGTCAATGAATTGATAACTATGTTACCCTGTCTTCGCAAAAGTCTTTTTTTTTTTTTTAAATATAGGTAGGTAGGGCCCCACCTAGAATTCTGTATTATACTTATGGGTAATATCTTTTCATTTATTATTTATCAAAGTATGAAGAAGTTGAGTGATTTGCTTGTACCATTCCAGTTCTGAGCTACAGTTCATTATATAATGGAAGAAAAGATTTGTTAATAACTAACTAAAGGTGAGCATTCATCTATCTGAATACAGAAAATCTTTCACAAATTGTAACACAAGGGAGAAAACGGATGTTTACTTTGATCTTTAAAAATCTGGCACCTCTCAAAAAAACAAAATCTGGCACTTCTTATCCTTTTAGTAACTTTCAATATTTCTATATTATGCTAAAATTTTACAATAGAATTGTGAAATAGTCTTGATTTTTAAACCAAAGATCTTCTAAGACATTTAAGTTTTTGTAGTGTAACCAGTATAGATTTATCTCGTTATCCAAGCAAAGACTGTTCTTTGCGTTTTTAAATTGCTGTTTTTTTAAAAGCTTTTAATTTCACATTTTATAAAATTTTATATTCATATTTGTCAGAAGTTCTAATTTTACATGAGATCATATAGTACTTCAGTTGGATAAAAAGCTTTGTTTTTTCTTTTTTGCA EMBV3_43555 GAAGGATGATGATTTTGAAGAGGAGCCATTTGACCTCCCAGATAACCCTCCTGCAAGTCT Gene GeneID:539661|MGAT4C:XM_002687186:74_cdna Constitutive 0 NULL GeneID:539661 5 GENE MGAT4C NULL mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) EMBV3_41521 ATGCCTCTATTTACTTGCTTTGGCATAAAGAATGAGCCAATGAACCTCTGTGTCCTGTGG Gene BVV0102_092887 + 0 NULL GK000026.2:30861051-31041195 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150736 TCONS_00150738 TCONS_00150725 TCONS_00150730 TCONS_00150731 TCONS_00150729 TCONS_00150737 TCONS_00150735 TCONS_00150734 TCONS_00150727 TCONS_00150728 TCONS_00150733 TCONS_00150732 1 XLOC_091939 Coding TCONS_00150728 XLOC_091939 Coding Coding ADD3 26:30841106-30972862 j TSS112825 4206 1 TCONS_00150728_4 706 15 0.968190960494858 0.0128015818258106 0 5.59570064681398e-06 0.00643226676243976 0.00938639359648138 0.000262944229766375 0.00665067481570469 0.00489118094447813 0.00527355357840932 0.00366157254130673 0.000582063743463818 0.000945802295204436 0.00147594730785606 0.00217101160442272 0.00185177439097849 0.0195703193382581 0.0158445862840266 0.0184400446999223 0 3.26590875276652e-05 0.00466166316243663 0.00863088901593419 0.00432223374957654 0.013711703776678 0 0.0113583149317761 0.00253574745086294 1.0710505367706e-23 0.000581403621214498 0.00189788768846391 XM_005225724.1 ADD3 PREDICTED: Bos taurus adducin 3 (gamma) (ADD3), transcript variant 0.0 7470 100.00 0.98454588682834 XM_005269529.1 ADD3 PREDICTED: Homo sapiens adducin 3 (gamma) (ADD3), transcript 0.0 5272 88.30 0.984070375653828 TCONS_00150728_4 sp|Q9UEY8|ADDG_HUMAN ADDG_HUMAN Gamma-adducin; 0.0 1378 96.03 0.998583569405099 1 coding 1 1 1 1 1.31506813155628 0.0207913604128595 -0.100364853916782 0.0856576282887919 GCCGTGGGTGGTAGAGAAAGGTGTGCGTTGCTGGGAGGTCTATTTCTAGGATAACAGGGAGACTCGGCAGACGTGAAGCATGAGTTCAGATGCTAGCCAAGGCGTGGTCACTACTCCTCCTCCTCCCAGCATGCCTCACAAAGAGAGGTATTTTGACCGCATCAATGAAAATGACCCAGAATACATAAGGGAGAGGAACATGTCTCCTGATCTGCGACAAGACTTCAATATGATGGAGCAGAGGAAACGAGTTACTCAGATCTTGCAAAGTCCGGCCTTTCGGGAAGACCTGGAATGCCTTATTCAAGAACAGATGAAGAAAGGCCACAATCCAACTGGATTACTAGCGTTACAACAGATTGCAGATTACATCATGACCAGTTCTTTTTCGGGCTTTACTTCACCTCCCCTCAGTCTCGGCATGGTCACACCTATCAATGACCTTCCCGGAGCAGATACATCCTCGTATGTGAAGGGAGAAAAGCTTACTCGTTGTAAACTTGCCAGCCTGTACAGACTTGCAGACTTGTTTGGATGGGCCCACCTGGCAAATACATACATCTCAGTAAGAATAAGTAAGGAGCAAGACCACATAATAATAATTCCCAGAGGCCTGTCTTTTTCTGAAGCCACAGCCTCCAATTTGGTGAAAGTCAATATAATAGGAGAAGTGGTTGATCAGGGAAGTACTAATTTGAAAATTGACCATGCAGGCTTCAGTCCCCATGCCGCGATATATTCAACACGTCCTGATGTTAAGTGTGTGATACACATCCATACCCTTGCAACGGCAGCTGTGTCCTCCATGAAGTGCGGGATCCTTCCAATTTCTCAAGAGTCCCTGATCCTGGGAGATGTCGCCTATTATGACTACCAAGGGTCACTTGATGATCAGGAGGAGAGAATTCAACTGCAGAAAGTTCTGGGGCCAAGTTGTAAGGTGCTGGTACTCAGAAATCATGGTGTGGTAGCACTTGGAGAAACAGTCGAGGAGGCTTTTCATTACATTTTTAATGTGCAGATAGCCTGTGAGACTCAAGTGCAGGCACTGGCAGGGGCAGGTGGGGTGGACAATCTGCTTGTGCTGGACCTTCAGAAGTACAAAGCTTCCACTCACACTGTAGCGGCATCTGGAGGAGGAGGAGTGAATATGGGTTCCCACCAAAAGTGGAAGGTTGGCGAGATTGAGTTCGAAGGGCTGATGAGGACTCTGGACAACTTGGGATATAGAACAGGCTATGCTTACAGGCACCCTCTCATTCGAGAAAAGCCGAGGCACAAGAGTGATGTAGAGATCCCAGCCACTGTGACTGCCTTTTCCTTCGAAGATGATACAGTGCCCCTCTCACCTCTCAAATACATGGCACAGAGGCAGCAGCGTGAAAAAACCAGATGGTTGAACTCACCAAATACCTACATGAAAGTGAACGTGCCTGAGGAGTCTCGGAATGGGGAGACGAGCCCCAGGACCAAAATCACATGGATGAAAGCCGAGGACTCTTCTAAAGTTAGTAGTGGAACACCTATCAAAATTGAAGATCCAAATCAGTTTGTTCCTTTAAACACCAACCCGAATGAGGTACTAGAAAAGAGAAATAAGATTCGAGAACAAAATCGATATGACTTGAAAACAGCAGGACCACAGTCTCAGTTGCTTGCTGGAATTGTTGTGGATAAGCCTCCTTCTACCATGCAGTTTGAAGATGATGATCATGCCCCACCAGCTCCTCCCAACCCCTTCAGTCATCTCACAGAAGGAGAACTTGAAGAGTATAAGAGGACAGTCGAACGTAAACAGCAAGGTCTGGAAGATGCTGAGCAGGAATTACTCTCAGATGACGCTTCATCTGTTTCACAAATTCAGTCTCAAACTCAGTCACCGCAAAATATCCCTGAAAAATTAGAAGAAAACCATGAGCTATTTTCCAAGAGCTTCATCTCCATGGATGTACCTGTCCTGATAGTGAATGGCAAGGATGACGTGCATGGTGTTGAAGACGAGCTTGCTCAGCGAGTAAGCAGGTTAACCACAAGCACCACCATAGAAAGCATCGAGATAACCATCAAGTCTCCAGAAAAAATTGAAGAAGTCCTGTCACCTGAAGGCTCACCTTCAAAATCACCATCCAAGAAAAAGAAGAAATTCCGCACTCCTTCTTTTCTGAAAAAGAACAAAAAAAAGGAGAAAGTTGAAGCCTAAATAGAGTCTTTTTATAATTGTTACTACAATGTGACATTGCACATTTAAAAACCACATATAAGTTGATCATTAATATGCAGTGGTAGATCAGATTGGGGGGTCTGTAGCAAACTGGACTTTTAAGAACTGGAAAGAGTTTTACTAAAAGAAAAACATATTATGAAAACACTTTCAAAGTCATCTCTCATTTTCTATGTCCAAAAAAGGTTTTGAATTTTTAAACAATTGCTAGTTTTGATTAGCTTTGCCCTCATGAAGTATTATAATCCCCACAAACAGATATCTGTCTGAATTACTTCAGGCCTTCTACATAATATCTGTTGGAAAGAAATTACCAGTGAACAAGTGAGAGAATTTTTGTTTCTCAAAACCTGCTTCACTTGGTAATGAGATTATAGTTTTTTATCATGATTATTGACTGTAACTGTTGGGTTCCCATTGTTTCAATGGGCATTAACAGAATGCTTTAAAAGCTTCTAAGATAAGAATCTATAGCATTAGTATACACTGGCACATAATTGTTTTTTTAAAATTTAAGAAAAGATTCATTTGGAATTTTATTCATAGTATGAAATTTCCTCACCTGAAGTAACTTTGTTTGCAAAAAAAAAAAAAAAAAAGGTCATTTTAGTAAACTATAATTTTTGAAAAGTTCCTTTTTTATTAGTTTAGAAACCCCCTTATTTTTCAGTGAAGGGGATTTTATACACATAACATGGGTTATTTAGTTTAACTCTGGCAAAAACGATTTTTGTATGTTGAGGCGTTTGTATACCATTCAGTATAAAAATGTCATAAGCATATTAGCCAATCATTTAACAGTAGAGCACATTTGAGGCTGCTTGGTACTAAGTATACTTTAAATATAATTAAAGAATCCAGGGACTTAGTATCAAAAGGGGATTAGAGCATTTAAAGGCATAACAAGATTCATATTTGAACCTTATAATGTATTTTTCTCTTAGTATTGCTAATGAGTGAGAAAGCCCTCACATGGTAACCACATGGAAAGGAAGAGACTGAGAGAGGAAGTGAGCAGTGACGGGAACAGGAGAGGTGTCATGAGAAGAGTTCTAGGTTGATGCTGCATGGCCACGATAGGATTTGAAGTGTCATTTATTTACAGCATGTCCCCGATGGCTAACATTTTGTTTCTCTGCCAAAACCATTGTATTTCTTAGTTGACATTCAAGTTTTAAAAGGGTGAAATCCTTTTAACGTTACGTATTTTTAGAAGGCGGCGCAAAAAGAAAGCAGTGGGTCTAATCCCCACCCCCGACCATGAGAAAACTACCACTTCTTAATTTTTACCAATTTTTCTTATGTTTTCAGTTAACTTTCTTTCTAATGTAAATACAAATTTAAACCTAGACTTAATATAGTTTTTTTTTTTTTTTTCCCCTTTCACCCAAGTAATGTCACAAATCAATGTAAAATCAATGATCCAAAATAGTCAATGGGTAAAAATAATCCAAAGTATTTCTGGAGGGTGAGTTGGTGTGTAAAAAAAAATTCCATGGATTATAGTGTGTTGCGGGGCTGGTTCTGTTTGACTGTGAGTGTTTGATGATGCAAAGTTGAAACGGAGCCTGGAAAGTTCATTCTAGATCTCACTAACTACTGGAATCAGTGTTTTAATCTTAGTGGAAAACTTCAGTTGCTTAATTCTGTGTTTGAGGATTCTTTTTTGTTCTACATCATTTATGTTGTATTACAATGTATGTAGAAACAGTAACCTGTGAACTATGCTTTTCCATAACTTTTTAAAAATATATATATCTTAAATGAATGCAATGTGCATAAGTATTTTTTAAATGCAACAGTGAACTATTTGCACCTTTTGCTAATGCCTCTATTTACTTGCTTTGGCATAAAGAATGAGCCAATGAACCTCTGTGTCCTGTGGAAAATGTATAAATGTTATCTGATATTGCTCTTAGATGTAATGCTAATTAATGTAAAATCACAAATAAACAGTATTTTAAATAGATGGACTTGGTATCATG EMBV3_05139 CTTTGCCAAGGCATTATCTGGAATGGGACACCTATGGCGGAAGGTGCATACTGTTTGGGT Gene GeneID:508940|THUMPD3:NM_001038062:71_cdna Constitutive 1 NULL GeneID:508940 22 GENE THUMPD3 MGC133599 THUMP domain containing 3 EMBV3_29305 ATCTCGACACTGCTCCACCTGCAAACTCTTTAACATCCCACCTCAAACCAGGGCTGTTCC Gene BVT0102_120859 - 1 EMBV3_04861 GK000010.2:73649589-73694667 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022138 1 XLOC_012809 NonCoding TCONS_00022138 XLOC_012809 NonCoding NonCoding - 10:73653376-73654517 - TSS16028 1141 1 TCONS_00022138_1 45 1 0 1.19243573986163e-05 1.76133894840389e-05 0 9.46134029012681e-05 2.16353810044336e-05 0.000147345596474869 3.06663510266683e-05 0 3.45755051780089e-05 0 0 0 0 0.000103066992578259 0 0 0 0 5.65630286701689e-05 0.000422283426741017 2.66058406910868e-06 0 0 0 0.000133590293394216 0.000450762285024467 3.08105830335163e-05 0 0 0 0 noncoding 0 0 0 0 -0.112590419071463 0.343525725930592 0.0316980544370889 0.601493531145441 GGGAGGAGTCAGGTTATCTCAGATGAGGCAAAGAGGACTTGGAGACAGCCAAGGTAGGACAACTCCTTTTAGAAGTATGGGGGAGGGGGGGAGAAAGGCAAGTGGTAATCATTTAGAAGAGTATGTATCCATCTCAAGGGAAAGGCTTCTTTATAGATGACGGCAAGAGTTGAAGGGGAGAAGGGTTTGAAGGAAGATGATCATAGTTTAGGCTAAGTTGAAGAGAGGGGCAACAAGCTCATGGTACAGAAGTGGGAATAGGCAGGAGGTGCTGGGTTTGAGAGCACATGCAGGGTCAGGTCACCTCTGAAACAGGAAGGCAGGGAGTAACGATGGACGCAGAATGCAGCTAGACTTTGGGCTTGGCTCGAGGGAAGAAATTTCTCATGTAAGAATTTCTGTACAGTAAAGTGCGTTGGTGGGTGGGGGGATGGAAGGGAAAGCCTGAGACTAGGCAGGACCACCAGGAGCGGGAGAGGAAACTGGCCAGGGGTATACGAAGGGATGTTGGGTGGCTTCATCTAGGGAAGTCCTGCAACCCAGGCTGGGCAAAGACAAGTGAACACATCCAGCTCATGGGGGCTTTCAGCTCAGATGAATTAGAAATAAAGGTCTAAGATATTGCAGTTTATTGTGGACAAGGTAGCTACAGTGATATGCCTTAGTCTTTAAGCAGAATAGCAAAGAAAAATGAAACCAAGCTGTGGGAACAAAAGAGAGCATAGGGACCAGCAGACTGGCAGTTCTAATGATGTTAATAAGCAGGTGGCATGAAAGCTGAGAGGGGAACAGCCCTGGTTTGAGGTGGGATGTTAAAGAGTTTGCAGGTGGAGCAGTGTCGAGATCCAGGTTTATGTCATGCCTTCTCTACCAGCTTGTAAATTCTGAGAGGCCAGGGATGGGTATACATTGCTGTGTCCCTCAGTTCAGTGTATGTTGAGGGCTCTGACCTGTCTTTCATTTGGCTATGTTATCATGATGCATTAAAGGATACTTGGATCATGTAAATCTTTCTCAGTCCCAATAAAGAAAGTTCATTCTAAACAAATCTTTATTGTATCTCTTTGTCATGAAGAGAACTCAAAGAGAGAGAAAAAGTCATTTCCAATTCCAGTATTCCTAAAATCATTTTATTTTTTCT TCONS_00017822 TCONS_00017823 . 5' 3751 TCONS_00017822 TCONS_00017823 . 5' 3751 EMBV3_36094 CTCCAGCTCATTCATTAGGGTCATATGTTTATCAGCTTAGCAGTTTAGGGAACAATTTGG Gene BVV0101_058035 + 0 NULL GK000012.2:30357921-30519851 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035033 TCONS_00035034 TCONS_00036684 TCONS_00035037 TCONS_00035035 2 XLOC_020814 XLOC_021201 Coding TCONS_00035033 XLOC_020814 Coding Coding HMGB1 12:30352925-30361685 = TSS25744 5072 1 TCONS_00035033_4 215 0.0674290220820189 5 0.42150930471515 1.70223874795769e-06 0.000481133210643699 0.000398919329977845 0.000361026807682939 0.000323113143117251 0.000150865036646335 0.00035759963325561 2.69960318630726e-05 0.000853335884315331 0.000168631615297041 5.71177269230875e-05 9.71961515302744e-15 1.60850823956711e-08 0.000184678390350054 1.84852936552672e-07 0.00872765983011408 0.00447529847711604 0.00348342222885911 0.000421986603512875 0.00040942703312624 0.000165482841392667 0.00466929102421706 0.00455809250830325 0.00532232169852562 0.000684557155262145 0.000128109775840415 2.5538969568607e-05 0.00178360106157308 0.000731755926330256 0.00160815247393499 XM_005213558.1 HMGB1 PREDICTED: Bos taurus high mobility group box 1 (HMGB1), transcript 0.0 3965 99.95 0.433753943217666 NM_002128.4 HMGB1 Homo sapiens high mobility group box 1 (HMGB1), mRNA. 0.0 3434 89.12 0.519716088328076 TCONS_00035033_4 sp|P10103|HMGB1_BOVIN HMGB1_BOVIN High mobility group protein B1; 5e-150 420 100.00 0.995348837209302 2 coding 0 0 0 0 -0.411942021305983 0.146727849924361 -0.401605095153371 0.04357492677015 CAATAGGCGCGGCGCTGGCTGGAGAGTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCGGAGGAAAAATAATTAAACATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTGCAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACTTATATTCCTCCTAAAGGGGAAACAAAAAAGAAGTTCAAGGATCCCAATGCACCTAAGAGGCCTCCTTCGGCCTTTTTCTTGTTTTGTTCTGAGTATCGTCCAAAAATCAAAGGCGAACATCCTGGCCTGTCTATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCGGATGATAAGCAGCCTTATGAGAAGAAGGCTGCTAAGCTGAAGGAAAAGTATGAAAAGGATATTGCCGCATACCGAGCTAAAGGGAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAGAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAAGAAGATGAAGAGGATGAGGAGGAGGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTTTTTTTTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAATAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTGCAAAAAAAAAGAAAAAGAAAAAAAGTTGCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAGTATTGTTGTCCTTTTCATAGGTCTGGAAATTTTTCTTAAGGGGAAGCTAGTCTTTTGCTTTTGCCCATTTTGGATCACACAGAATTATCACACTGTTTATCTTTCATATAGTTAGCTGATAAAAAGCTTTTGTCTGCACACCCTGCATACCCATGATGAGGGTAATAAAAGTTGAATTGAGACACCTTTCATCCATAACTGAAACTTCAGTCTTGACCAGTTGATAGCGGATTTCACATAGCCCAGTTACATTTACCAAGTGAAGAGTAACCAATCTATTCACAGCACGGGATTACTAGAATCAAGCATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAATCTTTACATGAGGACTCTACACTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTGCAGTTCCCACGTTAAAGACCCGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCATATTGTTTTTTTGTCGATGATTGTCCCAGCAAAGGCTCTGGGAAAAAGTGCTGGCTGTAAATGTCTTCTCCTGCTTATCCAAGTAGAGATTGTTTAGGAAACTTGAGACCCTTGGTTAAAGGTATTTTTAATTAATTGGGCTGACTTTAAAAGTTATATACCACATTTTAAATCAGGTATATCTTCCTGTATTATGGTTTGCCCCTTTATAAATCGAATAGACAAGGGAGGAAGACACTTTGTATTTCAGTATGAATTAACTGATTTATTTGAATTTGACTTTTCTTTACAAAACTCCAGCTCATTCATTAGGGTCATATGTTTATCTGCTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTTGAGATTATTGTTCTCTTAAAGTGCCAGTGTTTTAAAATAGCGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCTTTCCATTTGCATTTGTTTATGTAATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAATATTAGTTAAATGGCTTTCACTTAAGATTTTTGTTATATACATATTTTATCTTAATATCTCTTAGCAACATCCTTTAAGTGTAAGGGCTGCCAAAGTTTATCCTTTTAAAAATACTCACTTCACCCTTATAAATAGGTTAATGGGCTGATAAAAAAAGATTTCCATGAGACATTCCATGTGTTCTCAGGCTGCTATCTATAAATTAGGAAAAAACTAATTTTGCTTCCAGACTACTGAGTAAGATAGTTTTCCAAAGCAAGGTACATGTAAGTAAAAAGCAGAATAGTGATTATAAATCTAAACTTCCCTTTTCTAAGCTAAAGGAGAGGACATCAAAGGAAGGCTGAAATTGTCAAAATTTATCAAATTTTTGGTCAAGAGGAACAAGACGTTATCTCTGATTTACATGCAAGTTTCCTATAGCTATAGAAATTGTTGCTAGTAGGCAATCCTAAATGGATAAATTCTGCCCTGAGGAACTTGAGTGGGTATTATGTGGCAGAAGATGTTGAGAATGGGAACAAGGATTTTTTCAGGTTAACTAACTGGATTCAGGTCTTGACAGGAAGACATGGACAAAAACCCTCTTAAATTTTCAGACATACTAGCTCTTCAGTATTCAAAAGTACACCCTGAAACTTTGGTATCCAAAATGCAAATAAAGGGAGGTAGGAGGCAATTTAAATAATTTAGTGGAAAACCCTTGTTTAACTGGAGATGGTTTTTTAAAAGTTAACGCAGAGGAACTATTTCAATGGTTAGAAACAGTTACAGCACTATGGGTTATAAAGATTTTCTTCACATCAGATTAAACTATAGTATTTTCTGCATGTTAAAAATTGATAAAATTGGCATACTGATTTAAAAACTAATTGTTTTCCTAAAGGTTGGGAGGTATTGGCTGGTTAGTTACTATGATTGTCCTTTTGGCCTTGCTATCAGTTACTGATATTTGCTGTATTAATTTTCTTAATCTGGAAATTGTGTCCTGTGCACCACAGGGGTGAGACTCAAATGATAAAAGGTGAAAAGTGCCTGAGTGACAAGATGTTCAGCAAATACTTCCTTCACAGCCTGGGGGATTTTTTCAGTATTGTTAGACATTAGGGTAGTATCCAGCTGTATTGAAGATGCACTGGAAATATAAGACAGAAATTTCTGAATGGAAAGTGTGGGCAACTCCCTTGCTTGGCATCATATAAACCATGACAGAAGTTCAAATTTAGGTCTGTTCAGTGTAACAGGCCTCAAAGTGCCTGAAATACCTCTTTCAATACCAGCCAGGTACTTTCTGCATAGGATGGTATAACTATAAATTAGCACAAACCCATTACAGTTTACATCTTGGGATTAACTGCTGCTCAAGTGTGAACCATTGGCTAGTAACTAGTCTGTTAAGTGGTAACGTATTTTAAAAATTTTTTTCACATTGATGCATTGTCATTTTCTGTAAATTGACTCTTGAAATGCTTTTAAAACAACATAAAAGCTAGGAAACTCTGGATACCTATGCAACAAGAGATGCAAGCTGGTTCACTGGCCCGCTTGTTAACAGCGAAGACATGAACAGTGCTAACACTTGCCAGAACTTGGGAAGTTCCCTGGGTCTAAGCCAAGTCGGTCCCTGGAGTAAGTAACAAGGCAAAACGGCTCTGCTCTAGGAACACTGCTATTTAACAGTACACCCTGGCTCAGGACATGGGATGACAGGCATAATTTAATGGGCCATACTCCAGAATGTGCCCACACCTTCTAGTAGGTTTTGGTCTGGAATCACAGCTGCCAGTAAAAATGAAGGTCACTCAGTGTCTGACTTTGCGACCCCATGAACTATATGCCCACCAGGCTCCTCTGTCCACAGGATTCTCCAGCAAGAACACTGGAGTGAGTAGCCATTCCCTTTTCCAGGGGAGCTTCCCAACCCAGGGATCAAATCTGGGTTTCCATTTTAGGCAGATTCTTTACCATCTGAGCCACCAGGGAAGCCTGAGTCATGTCATTGGTTTGATCTATAGATGTAACTGACTGAAAAGGAGGAAGCAGTAGTACAGATCTGGAATGATATGAGGAATTATGGCAGCTTGAACAATGGTAGGATCAAGGATGCAGAGAATGAAAGCCAATCAACAGTGGTGAGAAAATCAGTGAAAAAGAGACTCTTGTACTTTTTTTTCTCTTCAGTCACACAATTCAAACATACAAGTGACATTCCATGGTATGATGTTCCATAATACATTTGATAATTACTGATGTCATTCGTGTTGTTGGCTATTTTTTGCTATTCCTAACTACCACAGTGAACACCTTGAAATAGAATTGCCGAGTCAAGTGCATTTAAAATTTGGCAGATACTGACAAAAGGACCGCTTCCCCAAGGCTATCCTTACTGTGAAAGTTTTTAGCGATGATTTCTAAGATAAATCAGGATTTTTTTTTTTTACTGATTATTCTTTAGCTCTATGAAATGACTCTCCCTTTTTTTTCCTTGTTGCATTATTTTTTTAATTTTTTTAATTGAAGGATAACTGCTTTACAGACTCTCCATTTTTAAAAGATGAGAAATTAAAATACTGAAATACTGTTGTTTGTTCAGAGCCACCCAAACACGAGGTAGAATCAGACATGAGAGACCCTTGGGTGTGACTATTTAGACTGTTTCCACTACTGAACAAATTATTTCTCTATAAAGTTATTGCAATAATGAAT EMBV3_32523 TCGCAAATCACATGAAGGAAAGCATCACTTCTACATTAGGCGGGGATGCCTGTGCCCTTC Gene GeneID:100336820|LOC100336820:XM_002689628:61_cdna Constitutive 0 NULL GeneID:100336820 8 GENE LOC100336820 NULL doublesex and mab-3 related transcription factor 1-like EMBV3_17617 CAGCCAAGAACTGATCCGAAGCTCATTTCAAGTGTTGAACAATCCTCAAGCGCAGCAAGG Gene GeneID:613290|ISCA2:NM_001038683:202_cdna Constitutive 0 NULL GeneID:613290 10 GENE ISCA2 HBLD1 MGC134327 iron-sulfur cluster assembly 2 homolog (S. cerevisiae) EMBV3_39557 CTCAATACTCATGTGAATGTCAAGGAAAAGGCAGTGCAATTCAAGTTCTAAAAGAATGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25955 AACTTGATGAGGAATTCCAACTCTTCCAAGGGGCCAAGGGTCTGGCCACGTGGTGGCTGT Variant GeneID:517675|FTSJ1:NM_001077934:69_cdna 352^421 1 EMBV3_29063 GeneID:517675 X GENE FTSJ1 MGC143353 FtsJ homolog 1 (E. coli) EMBV3_37961 CTGCAGGTCTTCAAGGAGCACACTCAGGAGTGGGATCCAACTGTTGGAAAGTCTCTGTGC Variant GeneID:533077|PEX7:NM_001076890:29_cdna 416^493 3 EMBV3_25425 GeneID:533077 9 GENE PEX7 MGC143449 peroxisomal biogenesis factor 7 EMBV3_04771 CAAGAGAAGCATTCAAAATATCGTCGTGTAGGCCTGATTCTGCTCCTCGTAGCCTGCGTC Gene GeneID:789687|LOC789687:XM_002688968:128_cdna Constitutive 0 NULL GeneID:789687 7 GENE LOC789687 NULL similar to hCG2036615 EMBV3_18739 CGGAGTGGACATTCAGCAGAGCCCAAGTGGAGAGAAGCAGATGGTGTTCACACAGAACCT Gene GeneID:618746|DLEC1:XM_002696913:420_cdna Constitutive 0 NULL GeneID:618746 22 GENE DLEC1 NULL deleted in lung and esophageal cancer 1 EMBV3_08732 TAATGTGCACACACGCCCCTGTTAGTGTGCACGTCGGTGCTGAAGCCTGTTCACACTGAA Gene GeneID:407109|PDHA1:NM_001101046:58_cdna Constitutive 2 NULL GeneID:407109 X GENE PDHA1 PDHA pyruvate dehydrogenase (lipoamide) alpha 1 EMBV3_20499 GCTGTAAATTCTAATGCTGTTCATGGATTGTGCAATTCCTATGCAATCAGTCTTTGCCTG Gene BVT0102_300155 + 0 NULL GK000001.2:88498547-88504289 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004506 TCONS_00004511 TCONS_00004516 TCONS_00004509 TCONS_00004517 TCONS_00004508 TCONS_00004514 TCONS_00004518 TCONS_00004510 TCONS_00004519 TCONS_00004513 TCONS_00004512 TCONS_00004515 TCONS_00004507 1 XLOC_001050 Coding TCONS_00004518 XLOC_001050 Coding Coding PIK3CA 1:88495519-88589560 j TSS2248 12113 1 TCONS_00004518_4 924 0.0873441756790225 21 0.8714164185453 0.000623410266634571 0.000334182653504626 0.000122782832993632 0.000195214957747544 0.00028068546337294 0.000221005434417073 0.000359258155653541 0.000115292979985689 0.00107896455334961 0.000166229775378465 2.93042357699122e-26 1.41605322828829e-13 0.000100744318844819 0.000190128117074382 0.000141038923703846 0.00182480131822024 0.0011041670758523 0.00313725067460397 0.000342887924451159 0.000582953672469313 0.000296294749063411 0.000832769989151033 0.000884959413271973 0.00104909972175513 0.00066687017697085 0.00055616605152543 0.000501054803491285 1.01758465807309e-07 6.19865964307104e-06 7.59132780840465e-05 NM_174574.1 PIK3CA Bos taurus phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha (PIK3CA), mRNA. 0.0 5777 99.97 0.264756872781309 NM_006218.2 PIK3CA Homo sapiens phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha (PIK3CA), mRNA. 0.0 5968 95.91 0.303888384380418 TCONS_00004518_4 sp|P32871|PK3CA_BOVIN PK3CA_BOVIN Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; 0.0 1885 100.00 0.975108225108225 4 coding 0 0 0 0 -0.00207585978454852 0.986886095574638 -0.021299587858688 0.644260829067703 NNCCCGCGGGGCTGGGACCCGATGCGGTTAGAGCCGCGGAGCTTCGAGGAGCCCCGAGCATTTCTGCTTTGGGACAGTTACACCTCTAATTCCTTAAAGTACTTTTATATGTAAAACTTGTAAAGGATCAGAACAATGCCTCCAAGACCATCATCAGGTGAACTGTGGGGCATCCACTTGATGCCCCCAAGAATCCTAGTAGAATGTTTACTACCAAATGGGATGATAGTGACTTTAGAATGCCTCCGTGAGGCTACGTTAATAACGATAAAGCATGAACTATTTAAAGAAGCAAGAAAATACCCTCTCCATCAACTTCTTCAAGATGAATCTTCTTACATTTTCGTAAGTGTTACCCAAGAAGCAGAAAGGGAAGAATTTTTTGATGAAACAAGACGACTTTGTGACCTTCGGCTTTTTCAACCCTTTTTAAAAGTAATTGAACCAGTAGGCAACCGTGAAGAAAAGATCCTCAATCGAGAAATTGGTTTTGCTATCGGCATGCCAGTGTGTGAATTCGATATGGTTAAAGATCCAGAAGTACAGGACTTCCGAAGAAATATTCTCAATGTTTGTAAAGAAGCTGTGGATCTTAGGGATCTTAATTCACCTCATAGTAGAGCAATGTATGTTTTATCCTCCAAATGTAGAATCTTCACCAGAACTGCCAAAGCACATATATAATAAATTGGATAAAGGGCAAATAATAGTGGTGATTTGGGTAATAGTTTCTCCAAATAATGACAAACAGAAGTATACTCTGAAAATCAACCATGACTGTGTGCCAGAACAAGTAATTGCTGAAGCAATCAGGAAAAAAACTCGAAGTATGTTGCTATCATCTGAACAACTAAAACTCTGTGTTTTAGAATATCAGGGCAAGTATATTTTAAAAGTGTGTGGATGTGATGAATACTTCCTAGAAAAATATCCTCTGAGTCAGTATAAGTATATAAGAAGCTGTATAATGCTTGGGAGGATGCCCAATTTGATGCTGATGGCTAAAGAAAGCCTCTATTCTCAACTGCCAATGGACTGTTTTACAATGCCATCATATTCCAGACGCATCTCCACAGCTACGCCATATATGAATGGAGAAACATCTACAAAATCCCTTTGGGTTATAAATAGTGCACTCAGAATAAAAATTCTTTGTGCAACCTATGTGAATGTAAATATTCGAGACATTGACAAGATTTATGTTCGAACAGGTATCTACCATGGAGGAGAACCCTTATGTGATAATGTGAACACTCAAAGAGTACCTTGTTCCAATCCCAGGTGGAATGAATGGCTGAATTACGATATATACATTCCTGATCTTCCTCGTGCTGCTCGACTTTGCCTTTCCATTTGTTCTGTTAAAGGCCGAAAGGGTGCTAAAGAGGAACACTGTCCATTGGCCTGGGGAAATATAAACTTGTTTGATTACACAGATACTCTAGTATCTGGAAAAATGGCTTTGAATCTTTGGCCAGTACCTCATGGACTAGAAGATTTGCTGAACCCTATTGGTGTTACTGGATCAAATCCAAATAAAGAAACTCCATGTTTAGAGTTGGAGTTTGACTGGTTCAGCAGTGTGGTAAAGTTTCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGTGAAGCAGGATTTAGTTATTCCCATGCAGGACTGAGTAACAGACTAGCTAGAGACAATGAATTAAGAGAAAATGATAAAGAACAGCTCCGAGCAATTTGTACACGAGATCCTCTATCTGAAATCACTGAGCAAGAGAAAGATTTTCTGTGGAGCCACAGACACTATTGTGTAACTATCCCCGAAATTCTACCCAAATTGCTTCTGTCTGTTAAATGGAACTCTAGAGATGAAGTAGCTCAGATGTACTGCTTGGTAAAAGATTGGCCTCCAATCAAGCCTGAACAGGCTATGGAGCTTCTGGACTGCAATTACCCAGATCCTATGGTTCGAGGTTTTGCTGTTCGGTGCTTAGAAAAATATTTAACAGATGACAAACTTTCTCAGTACCTAATTCAGCTAGTACAGGTACTAAAATATGAACAGTATTTGGATAACCTGCTTGTGAGATTTTTACTCAAAAAAGCGTTAACTAATCAAAGGATCGGTCACTTTTTCTTTTGGCATTTAAAATCTGAGATGCACAATAAAACAGTTAGTCAGAGGTTTGGCCTGCTTTTGGAGTCCTATTGCCGTGCATGTGGGATGTATCTGAAGCACCTTAATAGGCAAGTTGAGGCTATGGAAAAGCTCATTAACTTGACTGACATTCTCAAACAAGAGAAGAAGGATGAAACACAAAAGGTACAGATGAAGTTTTTAGTTGAGCAAATGCGGCGACCAGATTTCATGGATGCTCTCCAGGGCTTTCTGTCTCCTCTAAACCCTGCTCATCAGCTGGGAAATCTCAGGCTTGAAGAGTGTCGAATTATGTCTTCTGCAAAAAGGCCACTGTGGTTGAATTGGGAGAACCCAGACATCATGTCAGAATTACTCTTTCAGAACAATGAGATCATCTTTAAAAATGGGGATGATTTACGGCAAGATATGCTAACCCTTCAGATTATTCGCATTATGGAAAATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGATGTCTGTCAATCGGTGACTGTGTGGGACTTATCGAGGTGGTGAGAAATTCTCACACTATAATGCAGATTCAGTGTAAAGGAGGCCTGAAAGGTGCACTGCAGTTTAACAGCCACACACTCCATCAGTGGCTCAAAGACAAGAACAAGGGGGAAATATATGATGCGGCCATCGATTTGTTTACACGATCATGTGCTGGATATTGTGTTGCCACCTTCATTTTGGGAATTGGAGATCGTCACAATAGTAATATCATGGTTAAAGATGATGGACAACTGTTTCATATAGATTTTGGACACTTTTTGGATCACAAGAAGAAAAAATTTGGTTATAAACGAGAGCGCGTGCCGTTTGTTTTGACACAAGATTTCTTAATAGTGATTAGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAGCTATTCGGCAGCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCCAGAACTGCAATCTTTTGATGATATTGCATACATTCGAAAGACCCTAGCTTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACACCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACAATTAAGCAGCATGCTTTGAACTGAAATGATAACTAAAAGCTCAGTATCTGGATTCTACACTGCACTGTTAATAACTGTCAACAGGCAAAGACTGATTGCATAGGAATTGCACAATCCATGAACAGCATTAGAATTTACAGCAAGAACAGAAATAAAATACTATATAATTTAAATAATGTAAACGCAAACAGGGTTTGATAGCACTAAACTAGTTCATTTCAAAATTAAGCTTTAGAATAATGCGCAATTTCATGTTATGCCTTAAGTCCAAAAAGGTAAACTTTAAAGATTGTTTGTATCTTTTTTTAAAAAACAAAACAAAACAAAAAAACCCAAAATATATAGAAATGATGGAGAAGGAAAAAGGATGATGTTCTCTTTTTGTCTTGCAAATGTTTTCTGTTTCGAAATGTGGACACAACAAAATCTATTATTGCATTAGGTCCAAGTAAACTGGAGTTTGATGTTAAATTACTTTAAGATTGGAAAATAATGAAAATTTCTTATTTTTCCATTGCTGTTCAATTTATAGTTTGAAGTGGGTTTTTGACTCCTTGTTTGATGAAGAAAAATGCTTGGGGTGTAAGGGACTCTTGAGATTTCAACAGAGACTTTTCTTTTTTAATAAATCAAACCTTTTGATGATTTGGGGTCTTATCTGCAAAGTTTGGGAAGCAGTCACAAATGAGACCTGTTACAAAGTGGTATTTTGAGTTTTGTTTTTTTTTTTCCTAGACAGTATTTACAAGAATCTGATTCTTATTTCCCAGGGAAATTCTGGGCTCCCTCAAAGTAAAATAATCATCGTAGAGAAAGAATGAGCAGGAATAATTTTTGCTCCAGAATTGTACAGTATTCACCTTAGATTGACTTTTTTTTTCTCCTTTTGCAATGAATTGAATACATTTTTCATGCATGTTTTCCAGAAAATAGAAGTGAGTATTAATGTTATTAAAAAGATTATTTTTTTTATTAAAGGCTATTTATATTATAGAAACTATCATTAATATATATTCTTTATTTACATGATCTGTCCCATAGTCATGCATTGTTTTGCACCCCAAATTTTTATTGTTTGTAGCAGCATGGTCAGCTTTTTTCTTGATCTGTGGGTAAGGTTCAGGCACTATCTCATACCAATGACTAGTATATAACTACTTAAAGAAAACAGATTTAAAAGTTCTCTTTCCTTTTATTGTCTTCTGTTTTCACTTGAATCGCCCATCTTCCATCCTCTTTTATAGTTGAGAATGCCTCAGTCATATGAAATTAGTTGCCAAATTAACACAATTTAGACTATCTTCCTAATTGCTTCACCCCTCTACCCAAGTAGGCTCATGAATAATACTTTATCATAAGGGGAATAGAAATCATGAACTTTTTACCTTTTAAGGCTATTTACTCAGTCTCTCCCTAGTAAAATTAGGACCTTAAACCATTTTAAGATCATGTCCCATTTCTAATCAGGGCTCACTTTCCAACTTTATTAAATAGCATTTGAGCACAAGATACATTCTTAAACATTTTGAAAAACATTAACCCAGAATGTAGGGGCTCAGGCTAGTCATCACTCTACAATCTGATAATTTACTGAGTATTTGAAATGAATGATTAATGCCCTAGGAAATAGCTTTAGCAAATGTCCAGGTGCCACACCAGAAAAAGTGCAATAATTTACTGACAGTTTTCTAGACTAGGCTTATTATTGGAGTACAACATTATGAAGAGTGCATATTGTATACAGCATCACTTAAGAATATCCACTTATGAAATCAGATCTATAGTAGAAGTCTTGGATAGTAAACAGGGACTCTAATACAGATACTCTTAATATTTGGCTATTTTAGAACCCTTAAAGGGCATAATTATTGGAGACTTAGGTACCTCACTAAAGTGTGTACATAATATTGCCAATAAGAAAGATTAATTTGAAAATTAGGGAAACTTCTCTAAACTGTCTTGGAATAGTTAAGGAGAGTTTAAACTCTGTTTTAAGCAGGAGACCAGATAGATTCTTTTGCAGATATCGGAAATTTCAAACTTATTAAAACTTTGTGATTAATGTTTTTTGTCTTTTAGATTTATTCAGTTAATACATACTAACATCCCAGTATTTTCTGTATTAGGGATTAATTACAGGAACGCTCAGTAAAATAATACAATTCTGAAAGAAGTTTTGATGGTGGAAACTGAGATTTTAACAGAGAACCAACTGTGTTTTACTGAGTGCCAAAAAAGCTTTGAGCTTCCTTGTACAAAGTTTATATAATTTTTGCATTTTTCACATCAATCCAGATAGTCCCTTCCCCTAGGACCTCTCTGCCACTAAAAGACAAGCCACATAGCTTATTTTATCCCAAATTTTAAGAGTTATTACAACCAAGTTAATTCCATTGGATGAAATGTAGACAGGTTCTATAAAGACTATAGATTAAGTGAACTAGCTAAAAACAAAGTATATTTCAAACATATCCAAGCAGAGTTTATGCAAACAACATTAAAAATAAGGAAAAAGGGGACAGGTAGTACTCAGAAGGCAAGGAACCAAAAATTGAATTAAATTATTACATGGGATGACTAGGATATGTTTCAAGTCAGTGATAATATAGCTACTTCCAGGTACTTCAGTATCAGAGATCAGTTCCTATTGGCCAATTTCTATGACCAACCGTCCTTGTCATTGAATGTGGTATAACTGACTATTGACTTGACAGGTTCATTTGGCCAATTGAGCAATATTTCCTTTAATGACTATTTTGGAGAAAAGAAAAATAGGTTTAAAGAAAATAAAACTTAATTTAAACACATTTCTCGCAAGAAATAATCAACTATTTGAAAATCATGCTTTAACTTTTTATCATATTTTCAGCTATATAAAATCATTTATTTTGAAGACTTTCAGAATGCTGTTAATTTGAAATCTGTTAATCATGTTGTAGAATTTGGTTTTTTTAAAAAGATGTTTCTAATTGGATTTTTTAAAAAAGAATGGAATTTGGTCACTATTTTATGATAGAACCTAAGCTTTTTGTGGTTCTTAGTGTCCTCTGTAAAACTTAGTGTCGAAGTAATCAACTTTTGAGGTTTTCCCTTCTAATCTGCTTTATATTACAAGCCCTTTAGGAAATGGGAACCCGGTGAATATATAATGAATTGTAAAATATTTTAATGTGTAACTTTTTCAACTGTGAAACTATGACTATTGGTTTTTTGAAGAAAACAGCTGCTGATAAAGTATTTTGTGTAAAGTGTAGTTCTTATTAATCAGGAAAATAATCAATTACTTGATTAGAATGTATATATCCTCTTGGATTTTATTTTAAATGGATTGGTGATTTTCACGTAGGTAAAACACAGTCCATCTGTATTCTTTTTCCATCAAAAATCTAGTGATTTGGCATTTATTTAAAAAAATGTATGAGCAGCCTATGTATTTTAAAGGCACCATGGAAATGTCACAGTACATAAACTTGGATTCGTTTCTTAGTGATTTGTAAATCCATTTAATTCATACCCTGATCAGTAGTCCGTGTTTGCCACATTTTGAAGAAATATAATTTCCAGCATTATTTTAAATATAGCAAGTTAACTTTTTCTCAATGTTATAAATTCCTTTTGTTTCTGTTATCTGCACAAACTGCAGACCTGGGCTGGACCCACACATTCAGAATCCATCTTAAAAATTGATTTTGATGTCCAAGGCATCACTAAAATATTTCAGTTTAAAGACCATATGTGGTGTTAATGGATTGTGGTGCTTCTACTATTTAAAAACAACTTTCATACTTCAGATATTTTTGAGAAGAGGGGAATGTGAAGGGAGGGGGCAGAACAGGGAGGAGTTGCTTGAATGAGTTACATTCTTCATATCCGTCCTGCTCGGATCGGGCACTAAGAAGGCTGAAAGCTGTGAGAGTATGTTGTGCACACCATGAGGGAATTAATTCTTCATCAAGGATGGGATTGTGAAGGCTGAACTATACAAATCAGCACTGACAAAATCTTCAGATAATAATTCTTGGTGATAGAGAATAATACAGCTGGGCTGTTTTTTAAAATATAAAGACAAACCATTTTTATTTTTTAATTATCACATTAAAAATTGTAAATGTATCTTATGTACCATGGCCTGGGAAGCCTTTTTTCTTTTCTCTTAAGAGTTATTTTCACTTTCTGAAAAGAATATAGGGTTCAGCTCAAGATAACTATGGTCCTGATAAAATTGGATGGGTAACTCTACCTCAGAAGGTTAATAAGAAAAAAAAAATACATGAGTCACAATTCAATACTTTTGGCTCTGATATTACAGAAATTTGGAGAGCACTGTATTTTAGATTTATAAAGTCAGAGTTGATTTATAAAGTCACAGTTGGCATGTCCTGTTTTTAATGGCATTGGATACATTTAGAAAAAAATGGGTTAAAATTTAATCATTGCTCCAGCCATTTGGAAAAGGCAGTAGTGCTAGGAGGTTCATGGTACTAGGTTCCTGAATTTAGCATTTGAAATTAGTTTTGTTTTTTTTTATTGTTAGTGAAATTGATATGTGTATATTTGCAGACATTTATATTTGTATACACAGTACTTGCTAACCCTAGTCAAGAGACATCATTTATAAAAGGTGTAAACATCAAGGTTCTAAAATTCAGAAGAGTTTAGAATCAATTAGGAGTTTCCCAAGTTGGGGTGTTAGTTTTTACAAGCTTATTTCATTCAAGTGCTTCACTTGAGTAAGGGTTTGCACTTTTTGTCAATGCAACGCCATTCCTTTTGCTTGGTTTTAATTATGTTCGTATTTCAGCCATGCTAGTTAGCATAAAGAGATAGTTATGAGCCATAAGAAAATCTTATGACTTAACTTTTACACAACTACGCTTAAGAGTTTTAGCAACAAAGAAAAAAGATCAGTCCACTGTACATATTAGCATAGATGGGTAGCTGGTTTTTACTACCAACAGTTGACTCCAATCCTCCTGTTGGTAAGAATGGGAAGGATAATGCGTTTTGTAAGCATTAAGTTTATGAATCTATCTAAAATATTATTTAATCTCTCACTATAATAATTCTGTGGTTATGCTAAGAGCCGTGTATATTTCTGGTGATTCTTTTGTTAATCCTTCTAGGATAGCAAAGATGCAGAACCTTCACTGTTCTATTATTTTCTCAGAATATCTTTAATAAGACTAACCTCTTTAATTCTAGTGCAGATTTCCAAATGTGGTCACTAGCCATTGATTTCATAGGAAAAAAACTCATCAGATTTATATTCCTATTGGAGAGCTTGGCCTTCATGATTTCTAGAAATGATTCTGGCTGTGGAACCAAAGTTTCAAATGCAGTTAATGTTTTCAGTGCGGTTCAGTCCTAAGACTTTATTTCGGTTGAATAAAATCTAAAAGAATGTATCCTTTTAGAACATTACACTTCAACATCTTGGGAATGTGACACTACCATAGACTACTGACACCTCCAGTGTTGACTTTGGAAGCTTCAAAAAGGAGCTCCCATCACCCTCTTTGGCCCCATTTATTGTCACAAATCTATTTCTCTATATTTGTCTTTCATTGAGTTAGAGTCCTGTAGTATACCACATTAGTTAGGCGGAAAATGTTTTAAATGTTCTTTTAATGATGGCCCAAAAAAGTATATGACACAGCAAGTGCATGTGTTACTGTACTGAGAATACAGAATAATAACAGTGTCACTAAATTTAAGACCTCGTCCCAGTCATGCTCTTCCTGGCAAGAAGTTTGGCCTGTGACTGCACTTATTGTTTGTGCTCATCAGAAACTGTCAATGTCTGCTTTAACTTTGCAGTCTGTAACATCACGCTGTTTATTAAAAAAAAAAAATTACTTTAACTTGTGTCCAAATAATCCTTAGTGTACTATATGTTGAACAAAAAAACTGTGATAATTACACTTGCCATTTAATACTTAATAGCAAACCATCTTTTTAATACTTAACAGCAAACCACTGTTGGTAATAATCAAAATTTAGCTGAATTTTTCTTATCAACAATGACTAAGTTTAGTTGATTGAAAACCTGAAACTATTATGCCTTAAAAGCCAATTTTTCTGTCGCAGTAACATGATGAATATTGGAGAAATATCAGTTTAAATATTAACTTCCTTTAAACATGAAGAATTATATGCTTGTATTTTAAGCAGAGATTACATGTGTACACATACACATATGAATGTATCTGTATGTGTGGACAGATTTTTTCCCAAGTCAGTTGATGACCAGAACCTAAAAGTGAAGTTCGTCTAGAAGCAAACTGGTTTTGCACTCAGCTATCATAAACCTTGCAAAAGGTAAGTCTGGGCTTTTCTTGGACCAGTAATGCACATGGGCATTGATATTTAGTGCTTCCAAGCAATTCACAGCGAATAACTGCTAAAATTTTCATAGGCCAAATGGTTTGAGTTAACGTTGTAAGTTGACTTTGTTCTTCAAGCATAATGTCTCTATTTCCTTAGATGAGCCAAGTAGCTACTATATAAATGGAAAACTATAGTATTTGAAACACTTCAGGTTTCACACTTTCATACGCTTTAGGTTTCCGATTGTTATTAATATGTTAGGAGAAAAATCCAAAGAGCTGCATATTGTTAGGTGGGTGTCAGACTTACTAAGAAATGGAATAGATATGTGACCTTAATTTAAGAAATCTAGAAAATCTCAATTTGTGGAATGACTTAAAAAGTGTATGCATACATATATTTTATTACACGGAAGTCTTTGGCATACAAAATAATCTACTACAGCCTTCTAAAGAGCATGTTCCGAACTCTAGATACATATCATACTTAGCCAAGAAAAAGTGGGGAGGAATCGGCTCCTGAATCTCCTTACCCCAGCCCCTGTTCCAGCTGTCCAACAAAAGGTACCAAGACTGGTTGAATTATTTTATTTTTAATAAGAACTGTACATACTTAAGGTTTACAATATGGTAATTTGATATACATAATGAAATGATTACTATAGTCAAGCTAATGTATCGTTCATGTAGTTACCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGAGAGCACCTAGACTCTTAGCAAACTTCTGGTACTCAATGCAGTATTATTAACTATAGTCATTATGTTGTACATTAGATCATGAGATTTATTCATCTTATAATGAAGTTTGTACACTTTAACCAGTGTCTCCCCTATTTCCCCCACCCTGCCCCTGGTAACCAGCATTCTGCTCTCCGCTTTTTATGCGTTTGACTCTTTTAGATTCCACATATAAATGAAATGAAGTTTTTTCCTTTCTGTGTCTGGATTATTCTTAGCACAATGCCCTCCAGGTTCATCCATGTTGTTGTAAATGGATCTCTTTTTCAGGATGAAAAATATTCCGTTGTATGTATGTTTACACACACACACACACATATATATATCACGATTTATTCATCTGTCGATGGACACTTAGGTTGTTGCATATCTTGGCTGTTGTGCACAGTGCTGCAGTGAACATGAGAGTACAGATATTTCTTGAAGGTACTGATTTCATTTCCTTTGGGTATATACCCAGAAGAGGAGTAAGGTTAACTAAAAATTCAAACTTAGCAAAAGTTTTGTTATCTATCTACGAGGTACCAGAAACCAACCTAGGTGTTTTGCATACTTTGCCTTTTTTCTTCCCTAAAAATAACGTCATGAAAGAAAAGACCCATCCCCATCTTACGGACAAGAAGAGTGGCTCAGTTCAACTGACTTGCCCAAGGACACGTATCTGAAGAGCTGTAATTATGGCCTACAAATTTTAAAAAATCGTACTCTGAGACACATGTTCTCTCCACTATTCCACACTAGGAGGAGGAGAAAATACCCAAATTGTTCACTGCTGGTCAAGTCAATATTGCTCTATTATTCAGTTTGTTTAATAATGTGTGACTTGCAATTATTGCTAAAAGGCATTAAACTGGCTTAGAATCAGAGTTTGTTTTGATTACATCTACGTATCAGAGTTGCTTCAAAAGTCATCCTTTTTATTGTCCATGATGTAAGTTTTTTAGTAAAATTGTAATGATACTTTGAGGAACATTGGTTTTCAAAATGAAGTCTGTTTTCAACTCATACTCAGCTTAATCTGAAAAGCACTTGTTGGGAGAGTCTTGTGATACTATTTCATAACCATGGTTGATTCATTAATTAAAGTACGGACAATTGTTGACTATCCATGTGGGACTTTTCTATGATGCGGATTATCTGAGATGAATGTTAAATTCTATCCGGTACAGCTTCTCCCTAACTTGATAACATTTCTAGCCACCTCTCCCACTCCCTTCAGAGTGTACACAAAGAGCAAAATGAACTTATGGGAAGCATAATTAACTAGAAAGAAATGTTTCTAAAAGAAAAATCACATGCTACATAGCAAGGTTAAGTACAGATAACACTAAGCTTAGTGAATTTCCCAGGCAGCAGCTTTCCTCTTTTTTCATGGACGATGAGGTAAAATGGTAGGTCCATGTTTTCTGAAATTACTAGATTATTATCTTCCTGTAGTGTATGAACTGCTCTTCACTAAGACTTTTTTGACAAGTGTTTTAATGTTCACTGCATTGCATGGAATTAGACTGCCTGTTCAGTGCTCAGCAGGTTAGAAACTTGCATCACTTATTTTGACAGTGACAGGTTCTAGCAGGGGCTGATACTAGACGAAGCACAATGACCGTGAGCTCCTTTTACCCTGTGGAAACAAAAGGTGCTTCCCTGGCTCATGTGGAGAGATTTGGAATAAAAAAGATGGTGAATTTATATTTATTTAT EMBV3_24520 AATTGAGGGCTTCTTGCGGTGGGATCAGAAAAAAATCCAGGGTGCGGGCAGGTGACAGTT Gene GeneID:359716|DNMT3A:XM_002691463:317_cdna Constitutive 2 NULL GeneID:359716 11 GENE DNMT3A NULL DNA (cytosine-5-)-methyltransferase 3 alpha EMBV3_37534 GGACGACCCTCCCCTGTCCATTGACCTCACCTTCCACCTGCTACGGACCCTGCTGGAACT Gene GeneID:518336|UCN:NM_001032301:141_cdna Constitutive 0 NULL GeneID:518336 11 GENE UCN NULL urocortin EMBV3_03654 CATTGGATTTGGTTACAAGATGGAAGTGCTGGCTGGGTTAAGCACACAAAAGAATGCAGC Gene BVV0102_109181 + 0 NULL GK000005.2:31257298-31266939 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191478 TCONS_00191480 TCONS_00191469 TCONS_00191470 TCONS_00191476 TCONS_00191471 TCONS_00191475 TCONS_00191472 TCONS_00191473 1 XLOC_116931 Coding TCONS_00191480 XLOC_116931 Coding Coding CCNT1 5:31221419-31261860 j TSS143478 6380 1 TCONS_00191480_3 442 7 0.842408506429278 7.1077026152456e-15 1.71152362740736e-05 7.83207325305131e-09 0.00136238700744929 0.000143957851028107 0.000268412754337219 0.000596227473351415 0.000290479196854973 0.00126764019601023 0.00315069534019281 0.000180030296206263 0.00153789972954129 5.10404727887354e-25 2.06152796777933e-08 0.000646666944639084 0.00429268576557417 0.00214196949100699 0.00825479041431065 7.64789009574995e-06 6.43157477056207e-13 2.44202912220315e-07 0.00360870123004624 0.00309396808677476 0.00494145356628964 0.0012695967680718 7.38333702810384e-16 8.34638748269637e-07 0.000733227352723166 0.000903900141282963 0.00250607114481611 NM_001001147.1 CCNT1 Bos taurus cyclin T1 (CCNT1), mRNA. 0.0 2679 99.67 0.234639498432602 NM_001277842.1 CCNT1 Homo sapiens cyclin T1 (CCNT1), transcript variant b, mRNA. 0.0 6062 81.16 0.991692789968652 TCONS_00191480_3 sp|Q6T8E9|CCNT1_BOVIN CCNT1_BOVIN Cyclin-T1; 0.0 902 100.00 0.997737556561086 0 coding 1 1 1 1 0.144557435313507 0.334016965790295 0.0311318106037458 0.556720602351239 AGTCAGTCCCGCCCTGCTCTGCTTCCAGTCTTCAAGTCTGTGGCTCCAGCAGCCTTATTTTTAGCAGCCAAAGTAGAGGAGCAGCCAAAAAAATTGGAACACGTCATCAAGGTAGCACACACTTGTCTCCATCCACAGGAATCACTTCCTGATACCAGGAGTGAGGCTTACCTGCAGCAAGTTCAAGATCTGGTGATACTAGAAAGCATAATTCTGCAGACTTTAGGCTTTGAACTAACAATTGATCACCCACATACACATGTGGTAAAGTGCACTCAGCTTGTTCGAGCAAGCAAGGACTTAGCACAAACTTCTTACTTCATGGCAACCAACAGAACTGACACATGAATTTCTACAGATTCTGGAGAAAACCCCCAACAGGCTCAAACGAATTTGGAATTGGAGGGCATGGCAGGCTGACAGGAAAACAAAAGCAGATGACCGAGGAGCAGATGAAAACTCTTCGGAGCAGACAATCCTTAATATGATTTCCCAGAGCTCTTCAGATACAACTATCGCAGGTTTAATGAGCATGTCAGCTTCTTCTACCACAAGTGCAGTGCCTTCCCTTCCAGCCACTGAAGACTCAAAGAGCAACTTAAGCAACGTGGAGATGTTGTCAAGTGAGCGTTGGCTGTCCTCCCACCCTCCTTTCAAGGTAGAACCTGCTCAGGGTTATCGGAAGAGTGAGAATTTAGCACTTGTAGGAGCTGATCATTCCTTACAACAGGATGGTTCAAATGCATTTGTTTCCCAGAAACAGAATAGTAAGAGTGTGCCGTCAGCTAAAGTATCACTGAAAGAATACCGTGCAAAGCATGCAGAAGAGTTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAGGCCAATGTGAAGTCACAGTACGCGTATGCTGCCCAGAATCTTCTGTCTCACCATGATAGCCATTCTTCGGTCATTCTGAAAATGCCCATAGAGGGCTCAGAAAACCCTGAGCGGCCTTTTCTGGAAAAAACTGACAAAACAGCTCTCAAAATGAGAATCCCAATGACAGGTGGAGATAAAGCTGCCTCTATAAAACCAGAGGAGATAAAAATGCGCATTAAAGTTCACACTGCAGCTGATAAGCACAATTCTGTAGATGATAGTGTCACAAAGAACCGAGAGCACAAAGAAAAGCACAAAACTCACCCATCTAATCATCATCATCATCATAATCACCACTCACACAAACACTCTCACTCACAGCTTCCAGCTGGTACTGGGAACAAACGTCTGGGTGATCCAAAACATAGTAGCCAGACAAGCACCTTAGCACACAAACCCTACAGCTTGTCTAGCTCTTTCTCCTCTTCCAGTTCTTCTCGTAAAAGGCCCCTCCCTGAAGAGACTGGAGGGGTGGCGTATGATCATTCAACCAAGACCGCCAAGAGTGCTAAATCCTCTTCCATAAATTTCTCCTTCCCACCTCTTCCTACAATGGCCCAGTTGCCTGGGCATAGCTCAGACACAAGTGGCCTTCATTTTTCACAGCCCAGCTGTAAAACTCGAGTTCCTCACATGAAATTGGATAAAAGCTCCACTGGGGCCAATAGTCACAATACACCCCAGACCACAGACTATCAAGATACTGTGAATATGCTTAACTCCCTTCTCAATGCCCAGGGTGTTCAGCCCACTCAGCCCCCGGCGTTTGAATACGTTCATTCTTATGGAGAATATATGAATCCACGGGCTGGTGGAATGTCCTCCAGATCTGGCAACACAGACAAACCCCGGCCGCCACCTCTACCATCAGAACCTCCTCCACCGCTTCCACCCCTTCCCAAGTGAAAAAGAAGAAGAGAAAAAAGCTTCTTTAAAAACGCATTTGTTTTTAAACTACTGATTCTGGACTAAGAAAAGTACTTCTCATATGAAATATGTCACCCTTGTTGGACTAGGGAATAAATTAATATTGAGACATAGGTGGGAGGATGGTTGAGGGCCTTGGTTGTTAATGTCTCCTGCCTCAGAAATTTAACTATTTTATTATAGTTTTTACTGGTATTGGAGAGGTGAGAATGTGTTAAAGCTGTGAATGATTCAGAATACTTTCTCTCTTCTTGGCCTCTCCACCTCCTAATTAGGTTGATTAGAGTTGATATCTTCCCTCTTCTTGCCAGGACTGAAATATGGAGGGTTTGTTTTATCAAACAGTTGTGGATCCTTTTGGTGTTTAATATATAAGAAGAGAGGAAGTATTTAAACATCAAAATCTTTTAAGAGACTTTTAAAAAATAATTTAAAGAAAGTAAGTTATCTGTTTAGTTTTTTTTTTTTTATATAATTGGGGAAGGGGTAGGGATTTTGCTGTGTGTATGAGATGCACAGTAATGAGTCCTTCCGGGTGGGATTGGAGGGTTGGGGGTGTGTGTAGGTGGGTTGGGAAGATAGGATTTTGGCCATGAGTGCTGAGACAGGCTCTGGCCACTTGAAGTGTTTCGACCTGTAAGTGTGTATATAAGTGTGGGTATGTGTGATATTAAGTGTGTGTGTGTTTAAAAATCATGTTTTATCTTTCCCTCCCTGTCCTTCACCATTTCTACTTCTCGACAGTCTACTAGGGAGAACACGGTGTGGCCTTTTTGAGCATAAAGGGAGGAAGAGGCATATATTTGGTGTGATATTTTCCCCTATTCTTTATGTTGTAATTGAAGGTAGCCTTCTAAATTCTAGTTTGGGCAGGTGCCGCCAATAGTCTGATATTGGACTCTTATACAGACTTCCTTTTTTACCCTCTTTTTCCTTTTGATAGAGAACAAAGATGGGATTGAGGAAGAAGGCTGGAGAGCTAGGCTGGCTTCGGCCCTACAGAATTGTATTGTGTTTTTTTTCCCCCCATGTTGGGCTTTTGGAAAGTGTTCAAGTGAGAGCAGTCTCAGGGTCCCTGAATGGAAGTGGGGTGTGCTATCCTTTCAGTGAAGCCCAGACCATATGTGAGCATAGTTCTGGGAGAAGCCATGGAGCTAGAGGATACTGAAAACAATGAAAATTGTGATTGGGAATTTTTAGGACATTATATTTTAAATTATATTATGAATGTAAGACTTTCTGTATGTCTGAAGGGAAGCAGCTGCATCCTCAATTTTTGCAGTCTATATGACTTCAGAGATCGAAACTTACGAATTTAACAGTGCTGATGCCATGAGGGTGAGCAAGCCTAGCCTACAGATAACTGTTATGTTTAGATTGTCCATCTTTGGTGGCTTTAATTCTAGGCAGAAGTTCTTCTGGAGATTTCTAAAAGTCCTTTAGAAAAATGGATCAGGAGTCCTGTTCTTATGGGTACTTAATTGTCCCATATTTTAGGAGTGAATGTTTTTGTTGAAAGAAATCTTTCAGGGGGCTAGAAAGAATTCTAAGCCAAGTTGTCCAGCTGAAAATGCCACCAAGTCACAGATCATTTCATGTGATATTCTTCAGTCTTCATGGTGTTTTTTGCTATGGAAAAGGTGATGCAGTTTGAATTTGTCTTCTTGATTTTAATGCAGCTTTTTTCACACCAAATATTCTTTATGGATAAATTGAATTTTTTCATTGAAAGTCATAGGGAGATAGGAGTTTTGTGTGTGCTGCTGCTTGCCAGGAACAGGTTGGGGAGAAAACTGAGGCAGTTGGAATTGCTGATGCACTGGCCTAATACAGGAGGGAATTTGTACAATAAACCTTAACCGAAGATGAGTTAGTGTCCTTCGTCTCTGCATATTTTAACTGTCTAGAGTGCCTGCTATTGCTGTGTAAAGTGAGCTCTCTGCTGATCGATACACCAGTAATACTTTTGACTTGGAATGTCACTTTACTTTTACAGATGACATTTTCCTCTTTTTCCTTGATATTTTCTGTGTTATGTTTGGTAATTGGTAGATGCGTGATGTGTTTACTAAATTTAGGCTGTTCGTTTAGATTTTGTTTGGTGGAGTCAGCTTTCTTCCTTGACCTTTAAAGGTTATTTAGTTTGCTTTTGTATCTTTGTGGAAGTGATGATCACTGATTTGATTATGAAAATGTCTCTTACAGCTTTAAGTTTTTCTCATGAAATGTCACATATTTTCTAATCACATTCACTTCCTCACCACAGACATACATATCCACTTGGCCTCAGCAGTTCTTCATGGCAGTCTGTAGTTAGTTCCTTAGAACTTTGTCAGGAGTGACCTTGAAAAAAATGCTTACTAGAGCCTAAAAGCTGCTTTCTGCTGTATAGTCTGGCCTTTGCACTAGTAGATCATTGCTGATATAGGTCAGTTTAGAGACTTTTCTATATTAGTGCCTCCTGATACTGTTTTAAGATTCCTGCAGTGTCTGCTTTTGTATCTCTGCATATGTTATGAGCCTCCTTATGGGCTCTGCATGAAGTGTTTGCTGCATTGTCTTTGGGTTAGCAGATGTCCCTGTCAACTAGCATGCATGTTGTCCAAATTCCATAAACTTAGGCTTCATGAGGTTGTGTGGTTTCTAAACACTGTGTCGTCTTTTACCCTCACCACTTCAAAGGGTGAAAAACAGGATTTATACATCCAAAGTTAGTCTAGTAAACATGGCTTTCCCCCCCTCTTTTAACCTAGACTATCAAGGATAAGTGGTGATAAGCAGGCCTGGAGCCTCAAGTTCTATAAATCTCATTCCTGAAACTTTGCTTGAATCTCATGTTGGCAAAAACGATTATCTGTGAATTGTTCGTAGGACTTTTAATCAGATAACCTGTGTTGCTGTTTGCTTACCTTTAGTGAAGCATTAATCTAAAGCTACGTTGGTCTTCTGAAGTATCAGTTATGCTTTTGGGGTTTAGAAAATACATAGGAATTAGTCTGGTCTTTTTACTTGAATCAGTGTGTTTCCATATCTGAGACCCTCAGCTTCCCCCCCCCCCTTTTTTTTATGATTTTAGTGTTTTCATTTAATGTATCCTTTTACATAGTTCTGTATTATTGGCTTCACCAGTATTGATAGAAAAATTAAATCTCCAGGTGGAACAGCAATGGATTAGAATATAAAAATAAAATCCTGGTAACATCAGTGCTGGATTTACTTTCACCTCTGCTACCTAATTCCCCATATTGAAAATCCATTCCCCTCTTTGTTCCTGGACAAAAGCCGATTATAGTTGGATTCTAAACATACCTGTGTTTCCCACAGAAACAGGGGACTGTGGGAACTTGGGAACTGATTTAACTTTTAAAAGGATTATTCCTTTGTTGATAATTTGTTTTGATCTTAATGCCAGGGAAAAAGGATTCTCCAACATCTTTAAGTTGGAATATAAATGTTACTGTCTTGGGGTTGGGAGAATTTAAGCAGCCTATGCAACCCTTCACATGGTGAGAAGTAAGCCCTCTGCAGTCCCACTAAACGTTTAGTGACTGATGCCTCCCCAGATTTCTTGTGTTGCTGCTTGTCAACACCCAGCTTTTAACTGAGTATCTGTTCCTGGTGGTTTAAAGAATGTTCATGTTGTATCACACTGTCAGTTTTATCTCTCTATCCCTATGTGGGATAAAAAGCCTGGTACTATAATCCTGCCTGATAGAGTGGTCTTGAGTGAGAATTATTTTTAAGTGGGAGACCCTTCCATTTTAATGTCTCTAAAGGAATGTTTACTGAAAAGTGGTGTCTACTCTTCCTGTTTTTAAGTGTGTATTCATGGTGAATGAAAAGAGAAAGACTTGGGTTTTCTGTTGCCATATTAAGCATGGAGAGGGATGCTTGACAGCATGCTAATTGAAGCCAGAGCAAGTATGTCTCCATCAGGTTATCAGGAACTGTTCAGTTGAAAGCTGACGCCTTAACTGATTAGTGGTTGATCACATTGGATTTGGTTACAAGATGGAAGTGCTGGCTGGGTTAAGCACACAAAAGAATGCAGCTGACTTGACTTAGTGTTAACTTAGGTTCTGGATTTGAAACTGACCACCTCCTCACCCTACTCCCCACACCTAAAACTTTTCTTATCAGACCAAAGAGCAAAGAAGGAAAAAAAAAAATGAAACACTTTACCAATCTGTGTCACTCAGGTACAATTTTGTGGTGATATTTTTGTCTTTTTTTTTTTTTGTATTACTCTTAAGAGTCCTTTCTCAGCATATTATTCTGCTCTTGCCTCTGTCTTCCTCGGGGCACCTCAGTTCTGGATGCTACTCCTGGGATCTCTACTGTTGTTATGTGAATGGTAAGATGTAAGTGACCATTACAGTAAGGGCTCTTTGTAAAAAATTTTAAAAAATGTTTTTAAAAATTTAAAAAGTACATTGTATACATTTTATAGTCTGGCTATCAATTTGATATTTTGCTGTCAAGTATGTTTCTCAATCTGTATTTATCCATCCCATCAATAAATGTTAAACACTCATCTGATGATCAT EMBV3_20607 CTACTTCACTAATCCTATCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGT Gene BVT0102_003006 - 1 EMBV3_16445 GK000023.2:27867537-27900051 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00185886 TCONS_00020011 TCONS_00071043 TCONS_00251601 TCONS_00238893 TCONS_00251891 TCONS_00214738 TCONS_00115687 TCONS_00161953 TCONS_00141421 TCONS_00176254 TCONS_00233559 TCONS_00117290 TCONS_00240534 TCONS_00156731 TCONS_00090400 TCONS_00207366 TCONS_00160965 TCONS_00022065 TCONS_00252354 TCONS_00141380 TCONS_00020016 TCONS_00210648 TCONS_00238326 TCONS_00250931 TCONS_00251452 TCONS_00223013 TCONS_00160991 TCONS_00040584 TCONS_00201770 TCONS_00007361 TCONS_00056147 TCONS_00141629 TCONS_00187583 TCONS_00091802 TCONS_00079141 TCONS_00249282 TCONS_00185880 TCONS_00189806 TCONS_00231021 TCONS_00199595 TCONS_00152647 TCONS_00175849 TCONS_00070810 TCONS_00224114 TCONS_00036946 TCONS_00230725 TCONS_00148670 TCONS_00019962 TCONS_00048821 TCONS_00198661 TCONS_00245928 53 XLOC_131641 XLOC_111939 XLOC_010689 XLOC_042816 XLOC_154542 XLOC_145559 XLOC_154832 XLOC_130757 XLOC_069856 XLOC_098837 XLOC_085849 XLOC_106033 XLOC_143041 XLOC_071456 XLOC_147198 XLOC_095191 XLOC_055181 XLOC_125883 XLOC_097858 XLOC_012736 XLOC_155295 XLOC_085808 XLOC_010694 XLOC_129158 XLOC_144993 XLOC_153874 XLOC_154393 XLOC_136319 XLOC_097884 XLOC_024400 XLOC_123415 XLOC_002922 XLOC_033950 XLOC_086057 XLOC_113628 XLOC_056573 XLOC_048026 XLOC_152225 XLOC_111933 XLOC_115843 XLOC_140510 XLOC_121248 XLOC_092412 XLOC_105628 XLOC_042587 XLOC_137410 XLOC_021259 XLOC_140215 XLOC_090550 XLOC_010640 XLOC_028952 XLOC_120315 XLOC_150855 Coding TCONS_00223013 XLOC_136319 NonCoding NonCoding - 7:92166605-92167450 - TSS167011 845 1 TCONS_00223013_1 42 1.01420118343195 1 0 9.88644413762084e-05 0.000177284565412043 2.19030099897358e-05 0.000117967711632636 1.285419115155e-05 1.70290359147559e-05 3.69883347982911e-05 0.000132709942004618 1.15383999657716e-05 4.2854975008002e-05 1.69523627087688e-05 0.000186762592655985 9.3502663421495e-06 0.000121439362634576 3.67818699558392e-05 0.00289410309260668 0.00412401339629732 0.00754376524347487 0 2.93509206793039e-06 4.79010533804789e-06 0.00138222017738551 0.00182686326396122 0.00195144178450413 8.56834313205831e-05 1.09185897006997e-05 6.7250418070516e-06 0.000186371383055408 0.000303069987666269 0.000450184362023937 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 4e-132 475 97.84 0.327810650887574 0 noncoding ATCCTGTTTGGGACTCTCTGGGTTTCTTGGACTTGGGTGATTATTTCCTTCCCCATTTTAGGGAAGTTTTCCACTATTATCTCCTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGAATCCCTATGATTCGAATGTTGTAGCGTTTAATATTGTCCTGGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCGTTGTTCTTTTATCCTCTCTGATTCATTTATTTCTACCATTCTATCTTCTAATTCACTAATCCTGTCTTCTGCCTCTGTTATTCTACTATTTGTTGCCTCCAGAGTGTTTTTAATTTCACTTATTGCATTATTCATTATATATTGACTCTTTTTTATTTCTTCTAGGTCCTTGTTAAACCTTTCTTGCATCTTCTCAATCCTTGTCTCCAGGCTATTTATCTGTGATTCCATTTTAGTTTCAAGATTTTGGATCAATTTCACTATCATTATTCGGAATTCTTTATCAGGTAGATTCCCTATCTCTTCCTCTTTTGTTTGGTTTGGTGGGCATTTATCCTGTTCCTTTATCTGCTGAGTATTCCTCTGTCTCTTCATCTTGTTTAAATTGCTGAGTTTGGGGTGTCCTTTCTGTATTCTGGCAGTCTGTGGAGTTCTCTTTATTGTGGCTTTTCCTCACTGTGTGTGGGTTTGTACAGGTGGCTTGTCAAGGTTTCCTGGTTAGGGAAGCTTGTGTCGGTGTTCTGGTGGGTGGAGCTGTATTTCTTCTCTCTCCTTTCGAAGAGTTGGGTTGCTTTTCTGGGTGCCTGATGTCCTCTGCCGGCATTCAGAAGTTGTTTTGTGGAATTTACTCGACGTTTA TCONS_00217976 TCONS_00217977 . 3' 122766 TCONS_00217976 TCONS_00217977 . 3' 123610 EMBV3_08256 AGAAGCACAAGCTTGGTCTGCAGGTTCACGTCAAAGGGAGGCAGTCTGCTCAGGTTCACA Gene GeneID:100300263|LOC100300263:XM_002688009:161_cdna Constitutive 0 NULL GeneID:100300263 5 GENE LOC100300263 NULL hypothetical protein LOC100300263 EMBV3_10184 AGTGCCCAAGTCAGGCATATTTATTGACATCAAGGTGGAGCCTCAGTCTTCCCACGGGGA Gene BVV0102_037592 + 0 NULL GK000016.2:47629296-47631570 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069417 1 XLOC_041939 Coding TCONS_00069417 XLOC_041939 Coding Coding PHF13 16:47629592-47638622 j TSS51759 3730 1 TCONS_00069417_4 300 5 0.587440469597962 0.00195877881823464 0.00174972129093167 0.00215016830983367 0.00113359532930713 0.00150762507255563 0.00066678414908127 0.000719973182757724 0.000581957251119013 0.00142311898363912 0.000227572355787368 3.74370656666342e-05 0.000333123391831554 0.000150771801482421 0.00035120262545222 0.000262370795500584 0.00144567120298504 0.000807221160738638 0.000988837360672603 0.00170429791875568 0.0021276537275551 0.001592738735981 0.00205411318366743 0.000766142988094191 0.000916885831246874 0.00177484266532533 0.00236107279630318 0.00121424017683135 0.000119684446711522 0.000262902824287013 0.000319148759898255 NM_001206041.1 PHF13 Bos taurus PHD finger protein 13 (PHF13), mRNA. 0.0 3456 100.00 0.513404825737265 NM_153812.2 PHF13 Homo sapiens PHD finger protein 13 (PHF13), mRNA. 0.0 2599 76.74 0.93887399463807 TCONS_00069417_4 sp|Q86YI8|PHF13_HUMAN PHF13_HUMAN PHD finger protein 13; 0.0 546 95.00 0.996666666666667 2 coding 0 0 0 0 -0.0924693745023897 0.414906859203066 -0.00770277974013408 0.89214877361816 CTCCCTCCCGAGACACGAGCCGAACTGGGCGTCAGGTCGGGGAGCCGGTCGGGTTCCCGCTCGCCGCCGCCGCCGCCGCCGCCCCCCGCAGCGACTCTCCCGCCTCTCCAGTCGCGCTGGTCGCAGGACCTGCATCGACAACTCTGCTCGGCTGTGGAGCCGCCGGCCCGAGAGTATAGTGTCCAGGACGCGACACACCGACCCCCCCATCGTCTCCAGTCGGGGCGACCCCTCCCGGGTCCGCCTTCGCCCTGCGCGGCCGCCAGAGCCCCCGGCTCCGAGCGGCCCCGCGGCCCGGCGTCCGCATCCCGGCCCCTGCAGTCCGCGGTCGCCGCCCCCCACCCTGAACATGGACTCCGACTCCTGCGCCGCCGCTTTCCACCCGGAGGAGTACTCCCCCAGTTACAAGCGGCGCAGGACCGTGGAGGATTTCAACAAATTCTGCACCTTTGTCTTGGCCTATGCAGGCTACATCCCTTATCCAAAGGAGGAAGTCCCTCTGAGGAGCAGTCCCAGCCCCGCCAACAGCACCGCTGGTACCATCGACAGTGACGGTTGGGATGCCAGTTTTGCCGACATCTCGTCCACCGTGCCCTTGCCAGTCTCTGACCGCTGCTTTGGCCACCTGCAGCCCACCCTCCTGCAGCGAGCCAAGCCTAGTAACTTCCTGCTAGACAGAAAGAAGACCGACAAGCTGAAGAAGAAGAAGAAGAGGAAGCGAAGGGACAGTGATGTACCTGGGAAGGAGGGCTACGTGGGGGGCTTGCTGCAGCTGGAAGCCGCCGACCCATATGCAGAGACCCCCACGAGCCCCACTCTGCAGGATATCCCCCAGGCCGCTGGAGACCCCTGTTCGGGCTGGGACTCTGATACTCCTTCCAGTGGGTCTTGCACCACGGTGTCACCGGATCAGGTCAAAGAAATAAAAACTGAAGGCAAACGGACTATCGTCCGGCAGGGCAAGCAGGTGGTGTTCCGGGACGAAGACAGCACGGGCAACGACGAAGACATCATGGTGGATTCCGATGACGACTCCTGGGACCTGGTCACATGCTTCTGCATGAAGCCGTTTGCTGGCCGCCCCATGATAGAGTGCAACGAGTGCCACACTTGGATTCACCTGTCCTGTGCAAAGATCCGGAAGTCCAATGTTCCGGAAGTGTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGACATCCGCCGTTCCAACCGGTCCCGAATGGGCTCCCGGAAGCTGTTTCTGGACTGACTGCTGGAGGGCGAGGAGTCGAAAGGGACTGTGGGCCTGCTGGCCCTGGTCTTAGTTGAGCACAGGACTCTTAGCTCCAGCGCGGGCAGACCCCTGCCGTTCAGGTGCCTACATGAAAGGACCAGCTGTCCAAGGTATAAACTGTACATAGCCAGTGACTGAATAAAATCCTTGTTGGCCAGAGCTGCTGCTGGAGCCATGGTCTCTGCAGTGGAGGTGGACTGCACACCCAAGCGCAGCGGGTTTGGTCCAGCCGAACATGAGGGTGTGTGGTCGTTGTGCATTTTTGCTCTCATTGTTGACAAACCCCCGCCAATCGGAACAAGTGCTGTCTGTTACTCCTGCTTCCGCTGTGTTGGCGCGAGGAGATGACGTTTCCCCGGCCTGTTTATGAACCGCCATACGTGTGAACTTCTCCAGTCCGTCTTTTACCATAAGTGTCTGTATAGCAACCATCAAAGCCGCTCCTCCCTTAGTGGTCCCCCTCTCCCCTGCCTTAGGGGATGCCTGTTCTCCTGGGGCTGGAGTCCCTGGCCTCACCCAGGGGTGGTGAGCTGGCAAGTGAGCCCCAGGTTTCCTTCAGTTCGTCAAAGGGGACACTATGCAGCTGCTTCTCTGTGGAAAGGGGGTTGGTTCGGGGGTGGGGTCATGGTGGCCCATGTTCATAACTCAGTTTCCTGTTTTGCACGATGTAAAAAAACCTGTCTCTTTGCACGAAATAGCCAAAAGTATTGGCAGACTTCTGCCTGGGTTCCCTTCCTCTCCAGTTGGCTTTGGAGGTCCTGGGGGTGCCCAGCAAGCTGTTTTCAAGTGAGGGGGCGCCTGGATCCTCTCCTTGTCTCTCCCCCCTCACTTTGTTCTAGCAGCGACATTAAAGGTTAGGCAGTCTCTGGGGGAGGATTTTCTCCACATAGTGGGCGGGGGGAGGGAAAATGGGAGGAAGGCCTCCCTCATGGGTATAGTATGCCCCTCATACAGGCTGGCCTGCTGGTTCCACGGGGCAAGGTTAGGACTTTTGAAGCATTTTTTTGGTTTGAGTTGGTGGGTGAGTGAGATGGTAACGCTGGCCTCCAGGAAGGTACCACTGAACTTTGCAAAGTTCCTTAGATCTAAAAGGGCCCTGGACCGAGGCGACCCCTGTGCAGGCCAGCTCGGGAGAGGCCAGGGAGTTTGAAGCCCGGCGGGCCTCCACCGGAGGGCCATGTGGCGGGACACTGATGGCTCTCAGTGAGGGAGAGGGAGGACGTCAGTGTTCCTCGAAACTGATGTTACTCTAGCAGTTTAAATACTCATTCTCAAAAATTTTTTTTTTGTACATTGATGAGTGTGTCTTCATAAACATTATTTCTCACGAAGCATGAAGAGGGAAGAGTGCCCAAGTCAGGCATATTTATTGACATCAAGGTGGAGCCTCAGTCTTCCCACGGGGAGACTTCTCTACGTGGTCCCCATGTGTAGGGCCATCAGGCGGACTTGTGTCCACATTCTCTCACTGAAGCATCGGGGGGTTGAAGTGTAATTGGCTGATCGGAGCCTATATTTTGTCCTAGTATCTTTCATGCTTGACCAGCCAACTGCCTTTTTTGTTTTATTTTTAATTCTGTTGTTTCTGTTAACACAAAAAGAGAGAGAAATAGTTTTTGAAATCCATTTTATTGTGAAGAGCCCCAAGGGAGATGTTCTACTCTAGAGAAAAATAGTAAGGAGCTGGCTTAGAAACAACCTTCTCCCCAGACAACCGTCTGGCTCTGACTAGGGCAAAAGTCCAGGAAAAGTTGGAGAGAAATTTGCCAAAGATCTGCACTGTGACATTGCCTGTCCTTTGTCTTCACCGTGACAGTAGCCAAAGTTTCCAAGTGTTTCTCTCTTAAAAAAAAAAAAAAAAACCTCCACAGTTTTACAAGTGTGTTTAAGAATAGGTGTGATTTTAGGGTGGAGCTGCCAGTCTTGGCAATTACCATATTGCTCTTAGAAGACTCAGTTCCTGGTGACGCCTCTGGAAGGCATTTGATACTCATCTCGATTTCTGTTTCCGTCATTTGCTTTTGTTCTTTTAACAGAGTTATCCCTGTGGGTGGTGTCTTAAGAAGTCAGGACACCACGGTTTTTCTGTTAGATTGAGCTGGGCAGCTGCAATCAGCTTTATGCAAATTAGGTATGGCCCATCTCTGGGTTCCTGGTTGGTGGCTGATGGAGAAGGGAGGGAAAGTTGTCATCCCCAAAGCAAGTCCCTCCTGTCGGCTTTGGCCAGCTAATGGTCAACTAGTACTTTCTAATGTGACGTTGGAGCAGCCGAAATCTATGAATCAACACCTACTGAAATCTTGAAAATACTGGCCTCGGTGGCCGGTGAGCCTGCCTTTAACCAGTTGTCCAGAGCTGGGTTGTGTGTGTGTGAATTTTGGAGGCTCAGAGCAAGGAGGTGAGGGTGACGCTTCAGCATAACTAGGGTAAAACCTGCATCGGGGATGTCCGGTC EMBV3_05733 AACTGACCCTCTTCTCCTCTCTGCCGTTAACTCTCAGGTGTCTCTGTTTCCCCCAGGATT Gene BVT0102_107071 - 1 EMBV3_26499 GK000028.2:30855936-31001625 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16443 AGCAGCAGGAGGGCGATGGGAAGGACAAGAAGGATGAAGAAGAGGACATGAGCCTGGATT Gene GeneID:519729|ADRM1:NM_001080282:1129_cdna Constitutive 0 NULL GeneID:519729 13 GENE ADRM1 NULL adhesion regulating molecule 1 EMBV3_28790 ATACATACATATATATACACATAATGTGCTTAACCACTGCCTTTTAAAACTTTAAATAAA Gene GeneID:522873|RIC8B:XM_002687663:38_cdna Constitutive 0 NULL GeneID:522873 5 GENE RIC8B NULL resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) EMBV3_04337 GTGTGAAATCAGCCAAGTACTAGTGCCCTAACGTCAAACATTTGTCTTCCAAAACAGTCT Gene GeneID:512715|TUBE1:NM_001101962:23_cdna Constitutive 0 NULL GeneID:512715 9 GENE TUBE1 MGC143196 tubulin, epsilon 1 EMBV3_19600 GCTAGTATTCGCTGTGTTCATGGTCTAGAAATGCGGTTTGCTCTCGCCTACCAATCTCTG Gene GeneID:100137721|INSM1:NM_001101230:2_cdna Constitutive 0 NULL GeneID:100137721 13 GENE INSM1 IA1 MGC148636 insulinoma-associated 1 EMBV3_21007 TCACTCATACCGATCCTCACTGACCTTCAACCACAACCTATCGCTGGTGCTGCTCGCTAT Gene BVT0102_281751 - 1 EMBV3_43310 GK000019.2:22186259-22194037 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27991 GTGGGGTTTTGACCCCTATCTTTGCTCCTGGCCTCTGGGAAAGTGCAGAAAGAACAGGTT Gene GeneID:614490|LOC614490:XM_002692990:153_cdna Constitutive 0 NULL GeneID:614490 15 GENE LOC614490 NULL hypothetical LOC614490 EMBV3_09929 GGACCGTGTTAAAGTATGTCAGTCTGCCCGTCTTGAAACAAGTCCCATTACTCTGCAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04328 ACCCAGTCTTTATGAGTGTGAAGGTCTGTGTCTGTTTGGTGTCTGGGTCCTGGCTATGTG Gene GeneID:530153|LOC530153:XM_002686092:42_cdna Constitutive 0 NULL GeneID:530153 3 GENE LOC530153 NULL similar to olfactory receptor Olr390 EMBV3_25377 TCCAACTTCAAGGCTGATTATGGACGCTTCTCAACTAGTGTGGAGGGGGTGTTTGCTGCA Spike ESK0501 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28475 GGCTTGATGTGAAAGGTTATTTATTAGAATCTCTCCCTGGCGTTGGACGCCGCCCTTCAC Gene GeneID:100296173|LOC100296173:XM_002698619:39_cdna Constitutive 0 NULL GeneID:100296173 27 GENE LOC100296173 NULL similar to defensin, beta 1 preproprotein EMBV3_39010 AGGAGCTGGACAATGACAGCTTCTCCTATGATGAGGAGTCTGAGAACCTGGACCGAGAGA Gene GeneID:540077|LOC540077:XR_084552:460_cdna Constitutive 0 NULL GeneID:540077 23 PSEUDO LOC540077 NULL similar to p53-associated parkin-like cytoplasmic protein EMBV3_22961 AGAGTTGACTGGAAAATCCAGAAAAGCTCAGCTGGAGCACAAGGAGCTGCTGAGTAACTG Variant GeneID:510540|NUP85:NM_001034387:377_cdna 351^941 1 EMBV3_11973 GeneID:510540 19 GENE NUP85 MGC127809 nucleoporin 85kDa EMBV3_03079 GTACCACCTGGAGCATCAGGAGCTCTGTCCATTCTCTTTGCTTTTCCTGTGAAGACTGGT Gene BVT0102_264116 + 0 NULL GK000011.2:78040409-78168944 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41639 CTGCAGCTCTGGTCCGTAAGCCATCTGTTTATCCATCTAGAACAGGGGTCTGCAAACTAC Gene GeneID:507751|SNX15:NM_001075330:530_cdna Constitutive 0 NULL GeneID:507751 29 GENE SNX15 MGC140794 sorting nexin 15 EMBV3_05309 GAAGCAGCCGAAGTTGACCAGTCTTTTCCTAGGTGGAAAACTCAAAACTTGTTAACTCTG Gene BVT0101_009889 + 0 NULL GK000010.2:11033781-11052482 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015943 TCONS_00015945 TCONS_00015948 TCONS_00015947 TCONS_00015942 TCONS_00015944 TCONS_00015946 1 XLOC_008594 Coding TCONS_00015943 XLOC_008594 Coding Coding SERINC5 10:11048316-11058508 j TSS11147 4728 1 TCONS_00015943_7 132 4 0.536453733686586 0.00529563965796917 0.00522845018866152 0.00255089531051318 0.00222596494367226 0.00266452232737731 0.000872983886230369 0.000962567202440385 0.00177695641425671 0.00102769957772155 0.000388180971909392 2.47394363516269e-05 3.41137774723172e-05 0.000239508285034967 6.16739008136342e-06 4.43367950860561e-05 0.0075384940613965 0.0011397287654296 0.00403309277457407 0.00444897757376292 0.00622122385850405 0.00130906337221501 0.00152635630544514 0.00134891040001273 0.00107151221925009 0.00636987253328119 0.00489165942242689 0.00208534307160769 1.82701771652322e-13 5.16390010859185e-05 0.000745123592737999 XM_580814.5 SERINC5 PREDICTED: Bos taurus serine incorporator 5 (SERINC5), transcript 0.0 8212 98.93 0.98836717428088 NM_001174072.1 SERINC5 Homo sapiens serine incorporator 5 (SERINC5), transcript variant 1, 0.0 691 80.25 0.16751269035533 0 coding 1 1 1 0 0.1694197717904 0.384995812586525 -0.0355541753679699 0.591272793795959 GCCCGGTGTTGCTTTTGCTTCGGCTCTGGGGGAGAGGACGCTGAAGAGAAGCGGAATATGAAAGAGGGCCCACGGGTCATTTATGATGAGAAGAAAAGCACCGTCTACAGCTATGCCTATTTCCACTTCATGTTCTTCTTGGCTTCCCTCTATGTGATGATGACCGTCACCAACTGGTTCAACTATGAAAGTGCCAACATCGAGACCTTCTTCAGCGGGAGCTGGTCCATCTTTTGGGTCAAGATGGCTTCCTGCTGGATATGTGTTCTTCTGTACCTGGGTACGCTGATTGCCCCCCTCTGTCGACCCTCTCCTCAGTACTCCGTGTGAGGATCTGAGCAATCTCCTTGGTTCTGCAGCAGAAAGTGATGCCCTTGAACAAATATCCCAGGAGTCAAGCAGTGACTGGTACTTTGTGACAAGCTGGCATTCCCCTGGCTGGCTTCACTGGGTCTGAAAAACCTTCAGAGGGGAAAAAAAAAATTACTTGATTCGCTTTTTGTAATTCTCAAGTTCAAAAAGAAGCTACCAGTTTGCCCCTAAAGAATTGAAAATTTCACCTAAGTTGATGCTGAGTGTTTATAGATTTTGTACGTGTTTTACCCCTAAATACTGGGATAGTGGTCAGGCTAGTATTTTCCTTCTGCATGTTTTTACCAGGACAGAGTTTGGGGAATGACATCTTTTCACAGGGATAAAAGCTTACTTTGTGTGGCCTATTACCTATCCCTGAAATAGACATGACAAAATCGGGAGCCCTTTGCCCCCAGTAGAAGGCAGACCCCTCAGAAGGCTCCACACCTCAGCCTGCAGAGCTCCTGGCTCACTGTCCTGGTATTTATTGGCTCCAAGAGGAAGCATCTGCTTTTCATTCCACCCCTGTGCCATCTCCTCCCACCCCCGACACGTTTCCCTTTGAAGTTGTGATGCTGGGAATCACAGGCTTCACTCTGCCCTTGCCCTTCCCAGAGGTGCCCTCATCCCTTTGGGTTCAGCATCTTTCTTATAATGTGAAAAAGCACACTTTGCCATCACCACCCATGTGATTCCCCCCACCAGATTGTCACCTCCTGATCTGAGTTACTGCCTTAGTAACTTGCTTTGTAACTCAGATCAGGCGGTGATGGAGCCGTTTGACCCTTACTCGTGGTGGTTTTCACGTGATGATAGAACAATGTTCGTGTTGTTGTCTTCGCTATAGTTCTTGTTTGTGGGTTGATAGTCATGATACTTTAGGACCTTATTGGGAAGTTGCTTCTCGACTGAAGCCTACTGCACCCCTCTTTCCATTACTGAAGTCAACCAGTTTCTCTTCCACGCGAGGCCTTTGAAATTGTAAAAGCAAAAGGGCTTTTGTTTTCCAGATCTGTAATGTGACCACACCATTAATGTCCCTTATGATTTTAGGGGTAGATTTGCTAAGGTAAGAATCAGAGGCAGCACCTCAAACAGGGCTGACCAGGTAAGGCCTCCAATTATACAAATTGTAGAAGTGACCAGATGATATACTTAGAAGAAAAGGTGGGTGGGATGGGGAGTTATTTAATTAAGCCATGAGCAAAAGCCACAGAAACTTCCAAAGTACATACTCCTAAGGTGACACTTAAGAGAGATTTGACTCTAGGCAGCTGTGTAAGAAGATCTCCATTTTCAGTGCTGATGCTCTCATCCAGGGAGGAGTTTACACAGCGGAATGTCCACTGGAGACCCCAGTGGAGACACAGTGGGGACCCACCTCTTAGTATTTCATGCAGGATGGAAAGAATCCTCTCGGCACGTCGGGTCCCCCATAAGCTGGGCTCCAGGGTGCCAAATGCTGACCTGGGAAATTAGTCCCGCTCTTCATTTCCACTCACTCCTTTACCCTCCTCTCAAGAAAATGAGGGAGTTGGGTGGACGCAAGAGGCATACAGTGGATGAATTCCTCCAGAAACTTGCCTTAGTTATAGTGTTGGAGATTCACTTTTTAAAGGCACTCCTTGTGTGTGTGAGAGAGCCTTGTTTTGTACACTCGATCAAGTTTTTTTCTTTTTTTCCCCCAGATCAGGAGTCTTCAAACTTGGTCCAGAGATCTTCTGTAGGCACAGAATGAGTGGTTGCCATGTGTGGCCCACAGGGAAGCCCGTAGGGGTGGGAGCTCTGTGGTCAGACAGGTGGGGGCAGTAGGTGGCGTGTGTCACAGCAGACCTGGCAGGGGCCACTGCAGTGGCTGGTTCAGTGACAGGCTCTGGGTAAGCGAGACTGGCTTTACAAAGATCACGAGGACGGGCAGGTCAAGAGCTGGGGTGCTGTCGGTAGCTGGTTTTGTTGTGTTTTCTTCCTGCTAGGGTCTAGCATCCAACTCTGACTTTCGAGCTGGCCCTTCCCGTGCAGAAAATAGCTCAGGGAGACACAGAGGAAAGGACATCGCCAGTAGCCAGGCTTCCTTCCTGAGCCCCTCTCCCTCGCAGCCAACCCACATTCTCCAGCTGCTTAAGACTTGGTTGGTGCCTGATAATGTTCCTTTCTGAAGGTCGGTCTGATACAAGAAGAGTTACAGTCATTCTGATTTTTATTCTCAACTGAACATTTAAGCAGTTTTATCCAAATGATCAAGAGAGATGTGGACGTTCTCTGAGGACTAAGGGTATATAAATAAGATGTTGACTTTAATGATTATTAATTGTAGTAAACAGTACTCAGGTGATAAGTCAACATTCATGGGTTTAAAGAGTCTACGTTTTTGTGCTATTATGTTTTAAGAAACTGGAAACACAGTGCCAATTGCTTTGAGTTGCTGTTAAGGATGATGTTCATTTGATAAATTCACTGATAATCTTTTCAAAATAATAGACTTTGCTTCCTACAACTTTTTATACATGATTTAAAAAGTGCATTCTCAGAAGCTGCAGGTCAGATTCCTTTAGCGATGAGAGCTGAAGATTTTTTAAAACTGTGTAAGCTTCCTCGGTGCTGTTCATCTGATGTGGAAATTTTTTCACTTCTCATTTTCACGAGTAAATACACATAAATAGAGGAAAGGATTCTTCTGGGAGTGTTGCTGTTTATGTCTAGATGTGTCACCTGACTGGAGACCAGAGACTTTCTCACCAAAGGCTTTCAGAAACCCTACTTGGTCCTCACTGGGTTGATTTTTTTTTTTTTTTTAAATGCTGGTTAGTTGGTTTCGTTTTTGTCCTCACAATTTCTTGGGAAATGGCTTGAAAGAATTGTTTGCCAGAAGTCCTTGGAGCTCCTTCGTAGCGTAGGTGGGCTGTGTGCGTGTGGGCCGATGGAGGTTGGGGTCCCGGGGGCTTTGGGATTCTGGTGGCCAGCGAGGGCGCTTCCACACCCCTTTGTTTATTTCCAGTTGCTCAGAGATGCCTTCACTATGGTTGACCTCTGTGCACTGCTATTCCCCCCACATTGTCTCCTTCTGCCTTTTTAAGATTATTTGCTTATTTATAATAATTTTGGCCAGAAGTTTACTACCATTGGTGCTTCCTGTTACCCTGCAAAGGGAATTCCAGAGCCTGTATGCATTTACGCTGCCTAGGTCTTTTTCTCCTTTGATTGCCTTTCTAAAGAGCATCTCATTTTGGTGTACATTCATGTCCTACCCCTCTTGAAGATGAAAGGCGGTTTTAGATATAACTAAGAAGGATGTGATCTTGGGCCAGGATCCCACATGTCCAGAGAGCACCCTGGGCTCTCCTTCATTGAGGACGGCGCCGATACCACTGGGTTCATGCCGTTCTCTGTAGGGTCTTCTCCTTGATTTACTAAATCCCTCTGACTTCGTTCTTAACTGTGTTTCCTGCTGTCCTTAATATATTTGTAAAGCCTCAGACATTTTAATCCAGTGTTGTATTTTAGGCAGAGATGTGCTCTCTAATATACTTGTTTAGCAGGATACAGATCTTTTGAATTAATGCTAACCATTCTAAAGATTTCTCTCTCTCTTTTTTTTCCCTTCCTCAGTAAATCATTTACAGAAGTGTTCATTTTGAGAGGATGAAGTTATTTGGCTTTTACCAAAGAGGTGTTCTTTTTTTAAAAGCAAAATCCTTTCAGCAAAAACTTAACTTGAGGAATTGTAGATTAAGAATGCATTTGTCCACATCCACTTCTGTAGGTGTTAACCATGTTTATGTGAGTAAAATGTTAGAAAGAACTCTTTAAGGTAATCCTTTGTGGTGAAGGATCCTGGGAAATTCTCTCAGGTAAAGAAAGCTTGCAGCAGATGGGTAATATATGTCTTGAGAGCTATTTATAAGAAATTTAAGGATTGTTTTGTTTTCCTTTATTAAAGATTTAAGGTTATTTTACTTTGAAAAAAACTACAGAAATTTTATAGTCATAACTTTGTTACTTTAAAAAAAAAAAACTTGTCTGAAATAATTAGATGTAGCCAAATTATGTGGTTATGTTTTGCTGTTAGAATTTGAAAATGTAGTATGTGTGGTAATCTACTGTTTGAAATTTATAATGGTCTTAGATATGTTTGAGTTTTGGTAACTTTTAAAAAGTTATTTTTTTTGTTTTAAGTCACAAAGGCACCTATGGATTTATAATTGGGGTTTTTTTGAATGCTAATTTTTCTATGAAGCAGCCGAAGTTGACCAGTCTTTTCCTAGGTGGAAAACTCAAAACTTGTTAACTCTGTACTTTAATAAAATTAAAAAATGAAAACCATGTTTTTTTTTTCTTCTTCTTTCTGTTGAATATATTTATAAATAAAGTCTGCCA EMBV3_33734 GAATGACTAACAGTTTCCCTTTCACGGGGTCCAAGCAGCTCTCTGGGGACCATACACCCA Gene BVV0102_158875 + 0 NULL GK000002.2:130132651-130245901 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00141 AAGACCATCGTCATTCAGGGATCGGCAGCGTTCACCTATTGCACTTCCTGTGAAGCAGGA Gene BVV0102_146490 + 0 NULL GK000009.2:51013481-51046369 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235510 TCONS_00235508 TCONS_00235512 TCONS_00235507 TCONS_00235513 TCONS_00235509 TCONS_00235511 TCONS_00235506 TCONS_00235505 1 XLOC_144241 Coding TCONS_00235511 XLOC_144241 Coding Coding COQ3 9:51022584-51077752 j TSS176502 3894 1 TCONS_00235511_6 710 19 0.929758732575634 0.00493613671714466 0.00407880844237851 0.00493148164573757 0.00348163306449732 0 0.00155698506750888 0.00287971147175243 0.00462285400333191 0.00474994398700356 0.000927127601749149 0.00114748858749517 0.000601166311865952 0.000251420100490407 0.00168474059661975 0.000341513017949353 0.0173432608799332 0.00100901154069066 0.00847152332836775 0.00416066398671683 0.00309448271436381 0.00246897302068595 0.00493432976591036 0.0047768393074313 0.00665961474733968 0 0.00513918870065208 0.00393885563779161 0.00153765322695839 0.00145942114744595 0.0030976979679389 NM_001078097.1 SFRS18 Bos taurus splicing factor, arginine/serine-rich 18 (SFRS18), mRNA. 0.0 2262 99.92 0.322804314329738 XM_005266915.1 PNISR PREDICTED: Homo sapiens PNN-interacting serine/arginine-rich protein (PNISR), transcript variant X4, mRNA. 0.0 4360 95.08 0.707755521314843 TCONS_00235511_6 sp|Q8TF01|PNISR_HUMAN PNISR_HUMAN Arginine/serine-rich protein PNISR; 0.0 958 96.87 0.987323943661972 0 coding 1 0 1 1 -0.0365166505442576 0.728901569139328 0.00862872843412039 0.888610458382799 GGTGAGACTAATCGGGCGCCATCTTGTCTTGTTCGTGGAGAAGTAGAAGCATCGAAAGGGTTGGAGAGGTATTACAGGAACGGTGGCGACAGCGGTGTTCCGGAAACAGAGTGGGACATAAGTAATCTTGCTGCTATGCTTCCAAGTTGTAGTTCTGAATCATCCTAAATTTTAAACAGAAGGTGAACCTCTGAGACAGAAAAACAGATATATTTTAAAAGTCAGGATGTGGGATCAAGGAGGACAACCTTGGCAGCAGTGGCCTTTGAACCAACAACAATGGATGCAGTCATTCCAGCACCAGCAGGATCCAAGCCAGATTGACTGGGCTGCATTGGCTCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACAACCACCAGGAATGATGCCAAATGGACAGGATATGTCTACAATGGAGTCTGGTCCAAATAATCATGGGAATTTCCAAGGGGATTCAAACTTTAACAGAATGTGGCAACCAGAATGGGGAATGCATCAGCAGCCCCCACACCCCCCTCCAGATCAGCCATGGATGCCACCAACACCAGGCCCAATGGACATTGTTCCTCCTTCCGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACAGGCATATATTTAACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCTTATTGGCAACCAGGACCTCCAGGACCTCCGGCGCCTCCCCAGAATCGAAGAGAAAGACCATCGTCATTCAGGGATCGGCAGCGTTCACCTATTGCACTTCCTGTGAAGCAGGAGCCGCCACAAATTGATGCAGTAAAACGCAGGACTCTTCCAGCTTGGATTCGAGAAGGTCTTGAAAAAATGGAACGTGAAAAGCAGAAGAAGTTGGAGAAAGAAAGAATGGAGCAACAACGTTCACAATTGTCCAAAAAAGAAAAGAAGGCCACAGATGATGCTGAAGGAGGAGATGGCCCTCGTTTACCTCAGAGAAGTAAATTTGATAGTGATGAGGAAGATGAAGACACTGAAAATGTTGAGGCTGCAAGCAGTGGAAAAGTCACCAGAAGTCCATCTCCAGTTCCTCAAGAAGAGCAAAGTGAACCAGAGATGACTGAAGAAGAGAAAGAGTATCAAATGATGTTGCTGACAAAAATGCTTCTGACTGAAATTCTACTAGATGTCACAGATGAAGAAATTTATTACATAGCCAAAGATGCACACCGGAAAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACTGGACTCGGTGGACTGGGTGGTTATGGATCAGGAGACAGTGAAGATGAGAGGAGCAACCGAGGTTCTGAATCATCTGACACTGATGATGAGGAATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTTTTGGAGAAAAGAAAAAGAACAGCAGCTGTTACATGATAAACAGATGGAAGAAGAAAAGCAACAATCAGAAAGGGTTACAAAAGAGATGAATGAATTTATCCATAAAGAGCAAAATAGTTTATCACTACTAGAAGCAAGAGAAGCAGATGGTGATGTGGTTAATGAAAAGAAAAGAACTTCAAATGAAACTACGTCAGTTTTAGAACCAAAAAGAGAACATAAAGAAAAAGAGAAACAAGGAAGGAGTAGATCAGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCCGAAGTAGTAGTACTAGTAGTTCTGTCTCTAGCTCTTCATACAGTTCTAGCTCAGGTAGTAGTCGCACTTCTTCCCGATCTTCTTCTCCTAAAAGAAAAAAGAGACATAGTAGGAGTAGATCTCCAACAATTAAAGCTAGGCGTAGTAGGAGTAGAAGTTACTCTCGAAGAATTAAAATAGAGAGCAATAGGGCTAGAGTGAAGATTAGAGATAGGAGGAGATCTAACAGAAATAGCATTGAAAGGGAAAGACGACGAAATCGAAGTCCTTCCCGAGAGAGACGTAGAAGTAGAAGTCGCTCAAGGGATAGGCGAACCAATCGGTCCAGTCGTAGTAGGAGTCGAGATAGACGTAAAATTGATGATCTACGTGGAAGTCTTAGTGGAAGCAGTCATAAGCATAAAGGTGAGGTTAAAGAACAAGAGAGGAGAAAGGAGAGGAGTCGAAGTATAGATAAAGATAGAAAAAAGAAAGACAAAGAAAGGGAACGTGAACAGGATAAAAGAAAAGAGAAACAAAAAGGGAAGAAAAAGACTTTAAGTTCAGTAGTCAGGATGATAGGTTAAAAAGGAAACGAGAAAGTGAAAGAACGTTCTCTAGGAGTGGTTCTATATCTGTTAAAATCATAAGACATGATTCTAGACAGGATAGTAAGAAAAGCACTACCAAAGATAGTAAAAAACATTCAGGCTCTGATTCTAGTGGAAGGAGCAGTTCTGAATCTCCAGGAAGTAGCAAAGAAAAGAAGGTTAAGAAGCCTAAACATAGTCGATCGAGATCCATGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTCCCGATCAAGATCAACAACCCCTCCCCGTCGTAAACGCTGAGGAATGATGTGGCAACAATGCCATGATGTTTAAAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCATATTGTGGCTGTTTTATCCAAAGAATCAGCTCAGTTGGATTCTACAAATCAAACCATGGGTTTTCAATGAAAACAGAATCATGTGGTTCAAATCCTATAGCATAACTTTTGCCTGCCTGAATTGGATGAAAAGTTATAGGCTCCCTTGGACAAGACCATACAGTACTTCACGGACCACTGTAGACAGGAATGAGGTGAAGACCTTCCTGGCCCTGGCTCACAGGTGGTGGGACGAGCAAGGAGTATATGCACCTCTTCATTCTATGAATGACCTGAGGGTGCCGTTCATTAGAGACAATCTTTTAAGAACAGTTGCTACTCACCAGCCAGGAAAACCTTTGTCTGGGATGAAGATTCTTGATGTTGGTTGTGGTGGTGGATTGTTAACAGAACCTCTAGGGCGGCTTGGGGCTTCAGTCATTGGAATCGATCCTGTGGATGAGAACATTAAAACAGCACAGCACCATAAATCATTCGACCCAGTCCTGGATAAGAGGATAGAATACAGAACGTGTTCCCTGGAGGAGATTGTGAAAGACACTGTAGAAACGTTTGATGCTGTCGTAGCTTCTGAAGTTGTAGAACATGTGATTGATCTAGAAACATTTATACAGTGCTGCTTTCAAGTGTTAAAGCCTGATGGTTCTTTATTCATTACTACAATCAACAAAACCCAGCTGTCCTATGCCTTGGGAATTGTTTTTTCAGAGCAAATTGCAGGTATTGTACCAAAAGGTACTCATACCTGGGAGAAGTTTGTTTCACCTGAAAAGCTAGAGAGCATTCTGGAATCAAATGGTCTGTCAGTTCAAACTGTGGTGGGAATGCTCTACAACCCCTTCTCAGGTTACTGGCATTGGAGTGAAAACACTAGCCTTAACTATGCAGCTCATGCCCTGAAATCCAGCCTTCAGGAACAACCAGCACCTGCCGAGTTTGCTTTAAAGGGGGAAGCAGAAGAGCTCCAAGCTGAAGCCTCCACCAACTCAGGTGTGCAGGAAGACCTGAAGAAATGAAGTGTTTCTAAGGACTATAGTATAATGGCTTGAAAGTCTGATGTTTACAAATACACAGAATATATACTGTTTGTTTTTTGAGACAGGATCATAAAGAAAAAGTCAATAAAAAGGGCTAAAACCTTGGATAAAA EMBV3_40414 TGAACGAGTTTGATAACAAGATCATCCTGGACCCCATGACATTCAGCGAGGCCCGGTTCC Gene GeneID:527492|CTNNA2:NM_001102110:101_cdna UTR3_Alt 2 NULL GeneID:527492 11 GENE CTNNA2 MGC148616 catenin (cadherin-associated protein), alpha 2 EMBV3_31229 TGCTGAAGTTTGAGGCCATGGAAAGCCTGTAGCAGCAGAAGGGGAAACAGAATGAACGTG Gene GeneID:510376|ANKRD1:NM_001034378:27_cdna Constitutive 0 NULL GeneID:510376 26 GENE ANKRD1 MGC128138 ankyrin repeat domain 1 (cardiac muscle) EMBV3_06720 CAAGAAGTACATCAAAGATTACATGAAGTCTTCTTTATTGGTGAAAACATGAATCCAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18717 TTGACTCTTCTCGCTTAACTACGTCGGCGGGCTCCCTTGGACAAGACCATACAGTACTTC Variant GeneID:540298|COQ3:NM_001076210:8_cdna 127^253 3 EMBV3_14903 GeneID:540298 9 GENE COQ3 MGC127187 coenzyme Q3 homolog, methyltransferase (S. cerevisiae) EMBV3_06332 CTCAAGTTCAGCGAGTACTGGAGGCTGATTGGGGAGCTGGCAAAGGAGATTAGGAAAGAG Gene GeneID:404146|S100A13:NM_205800:52_cdna Constitutive 0 NULL GeneID:404146 3 GENE S100A13 MGC128578 8KDa amlexanox-binding protein EMBV3_20876 AGGTTAAGGAGAGGAAGAGGCGAGGAAGGCCGGACCCAAAACTGGGAACTGTTTGTCTTT Gene BVT0102_067519 + 0 NULL GK000003.2:15463931-15464424 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00172131 TCONS_00172133 TCONS_00172132 TCONS_00172134 1 XLOC_104036 Coding TCONS_00172134 XLOC_104036 Coding Coding MTX1 3:15464115-15469012 j TSS128275 1366 1 TCONS_00172134_5 221 8 0.722630718954248 0.000752421557924225 8.28573590299989e-08 6.92359874731919e-20 6.71178840760538e-08 2.39871204334028e-31 9.60206673131229e-09 0.000111871527361284 6.08087197193103e-05 6.09958178492155e-08 8.55309583907356e-05 0.000192766936659651 0.000155758810237675 2.25514254552103e-08 3.48328209699796e-08 3.31948212891508e-88 0.0161286842455833 0.0145997231140589 0.0123651780749414 0.000112962017521363 0.000960307951940593 2.17956893084067e-08 0.00804625213696892 0.00572589157622411 0.00610997635961774 2.23190600584556e-10 0.00032785044636002 0.000375106100201699 0.00251918986206172 0.00144504431539898 0.00175664587827095 NM_001040608.2 MTX1 Bos taurus metaxin 1 (MTX1), mRNA. 0.0 1802 99.80 0.734260614934114 NM_002455.3 MTX1 Homo sapiens metaxin 1 (MTX1), transcript variant 1, mRNA. 0.0 1332 89.71 0.731332357247438 TCONS_00172134_5 sp|Q2TBS1|MTX1_BOVIN MTX1_BOVIN Metaxin-1; 1e-159 449 99.55 0.995475113122172 3 coding 0 0 0 0 -0.0893140587852315 0.559804209207986 0.0433860671971524 0.364128099883096 GATCCACACAGAGGAGGGCTGAAGCGCAGGGGGAGGTGCTTCCGGGACAGAGGGCAGACCTATGCCAGATTTACTGGTGCCCCACTCAAGGTGCACAAGATCACCAACCCCTGGCGGAGTCCTTCAGGAACTCTGCCTGCCCTTCGGACCAGTCATGGAGAGGTCATCTCAGTACCACACAGGATCATCACCCACCTTCGAAAAGAGAAGTACAATGCGGATTACGACCTGTCAGCCCGCCAAGGAGCAGACACCTTGGCCTTCATGTCCTTGCTGGAGGAGAAGCTGCTCCCAGTGCTGATACATACTTTTTGGATAGACGCCAAGAACTATGTGGAAGTGACCCGGAAGTGGTATGCAGAGGCAATGCCCTTTCCCCTCAACTTCTTCCTGCCTGGCCGCATGCAGCGGCAGTACATGGAACGGCTGCAGCTGCTGTGTGGGGAGCACAGGCCTGAGGATGAGGAGGAGCTGGAGAAGGAGCTATACCAGGAGGCCCAAGAATGCCTGACTCTTCTCTCTCAGCGCCTGGGCTCTCAGAAATTCTTCTTTGGAGATGCTCCCGCCTCCTTGGATGCCTTCGTCTTCAGCTACCTGGCCCTGTTGCAACAGGCAAAGCTGCCCAGTGGGAAGCTGCAGGCCCACCTGCGGGGGCTGCACAATCTCTGTGCCTATTGCGCCCACATCCTCAGCCTGTACTTCCCCTGGGAAGGAGCTAAGGCACCACCTCCACGCCAGACACCAGCAAACCCAGAGACTGAGGAGGAGCCATACCGGCGCCGGAACCAGATCCTAACTGTGCTGGCGGGGCTGGCAGCCATGGCCGGCTATGCCTTGCTCAGCGGCATTGTCTCCATCCAGCGGGCACCATCTGCCCGGGCCCCAGGCACCCAGGCCCTGGGCATGGCTGAGGAGGATGAAGAGGAATGATTTATCCTCATGCTCTCAGGACTGATTTTTCTACTGTCATGCATTCCAGAGGCTCCTGTGTTTCCCCATTGTTGGTATGGTGGAAATGGGGTGCCACCCTCCCCAGAAATAAAACTGCTCACATGGACTGAGATCAGACATTGTGTCTTTTAAGAGCTGCCATTTCTCCTAGCTGGTACGGGGGGCCCTCTGGTGCTCGAGTCTACCCTCTGGTGCTCGGCTTCGTTCACTGCCTGTGCCTTGGTGCTGACATCTGCACAGGCCTGGTTCTGCATCTCCAAGAAAGACAAACAGTTCCCAGTTTTGGGTCCGGCCTTCCTCGTCTCTTCCTCTCCTTAACCTCTCTCTCCATCCACCCCACCCCCTACCCCTGTGTTTGTACAGACAGTGAGCTCACCCTGGGCCGGGGCCCAGTTTCCACAGGCAACCAGCGCAT EMBV3_12132 AAGAGCTGCCACATGACCGGAGCCTATGATTCGCCAAGTCTTGCCAGTTGACTGTGCCAC Gene BVV0102_045542 + 0 NULL GK000016.2:52275276-52310954 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069521 TCONS_00069522 TCONS_00069526 TCONS_00069527 1 XLOC_041981 Coding TCONS_00069527 XLOC_041981 Coding Coding MIB2 16:52264683-52275935 = TSS51819 3711 1 TCONS_00069527_8 887 17 0.671673629010755 7.66325459381304e-18 4.30034883890556e-28 7.2146057353875e-31 1.10333197843435e-22 6.46285351732388e-74 1.79735534304943e-16 0 1.03946532933588e-17 2.73017816892617e-66 2.84086747788523e-09 1.492981458918e-09 1.51603080045654e-09 0 6.5550787871338e-26 4.85190529838984e-49 0.00111863022515232 8.7624141234298e-09 0.000280608774345303 3.264839425537e-59 9.08582611213104e-27 3.95360341098547e-15 4.34154559465229e-14 0.000368805021266367 0.000672792866511344 0 4.10343097117451e-15 3.65904438272928e-18 2.67508026990076e-14 9.13490092689665e-09 2.14595557159836e-09 XM_002694125.3 MIB2 PREDICTED: Bos taurus mindbomb E3 ubiquitin protein ligase 2 (MIB2), mRNA. 0.0 4017 100.00 0.59983831851253 NM_001170688.1 MIB2 Homo sapiens mindbomb E3 ubiquitin protein ligase 2 (MIB2), 0.0 3164 85.90 0.723794125572622 TCONS_00069527_8 sp|Q96AX9|MIB2_HUMAN MIB2_HUMAN E3 ubiquitin-protein ligase MIB2; 0.0 1212 86.23 0.801578354002255 8 coding 0 0 0 0 -0.0521988830453669 0.712283167538586 0.0156303289771942 0.753376819389664 CTCCTTTTGAGCTCAGAACCAATAGAGAAAATAAGTAAAGGTGCCAGACAGGCTCCTGGTGGGCATCAGCGGGGCAGGGGTTGCGGGAGCATTACAGTGGGAGCACTGGCACACCAGGTCGTTCCTGGCGGGTCCCCTCCTCTCGCCTTTCCCTCTGGCCTGTTGCTCCAGGTGCAACAAGTATCTGAATGTCATGCTCCCGCCCAAGACTGGCCCTGTGCAGTGGTTGGGTGGTGACTGCCCTTGCCTGAGGGCTTCTGTTTGGGTCACCAGGATTAGGGTGATGGCCTCCTTCTACTTCCTTTAGGCCTTCTTCCAGCAGGTGACTGACAGGCCAGACTCCCTGGCCACTCAGGATGTCCACCTCGGCCTCAGCAAGAGCTGCCACATGACCGGAGCCTATGATTCGCCAAGTCTTGCCAGTTGACTGTGCCACATGTGGTGCGGATTTAAACACCGTCATTAGACCAGCCAGAGGTGCCCAGAAAGGAGTGGCAGCCTCTGGTGGCCAGCAGTCGGCACCCAAGTTGATTCTTCTCAATAAAGACAGTTTGCCAACTTCCTAGCTAAATGGGATTTACTCTTTGCAGCTTTTTAAAGTTTTTTTTCATAAAATAATCAAAATAGTGCAAATACTTTTATTTCTATACTGTCTAAACGTGTGCTTTAGAAATACTTCTGCCTTCCAAAGAGAAACTAGTAAACTAATAGAGCAGACCCAGGTGTCCACCCATTTGGTTGAGATGGTAAATGCTAAAAGTTTAAGACTGCCTTTTAAAACCCATTTTTCCCCAGACCTGCTGACTTTCTACCTGTTTGGTTTGCTGTGCTCTGTGTCAGCCATGGATTCCAATCTCCAACAGGAAATCTTGGTGGCTGAGCAAACTTGTGACCCGAGAAACAGCAGCTAAGCATTTGGGATGCTGACAAGAGGCTGGTGTATACGCTGAGGCCTCCACCATGGACCCAGACCCCCAAGCAGGCGTGCAGGTGGGCATGCGCGTGGTGCGTGGCGTGGACTGGAAGTGGGGCCAGCAGGACGGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTCGGCCGCCACGGCAGCCCTTCGACCCCCGACCGCACGGTGGTCGTGCAGTGGGACCACGGCACTCGTACCAACTACCGCGCGGGCTACCAGGGCGCACACGACCTGCTGCTCTATGACAACGCCCAAATCGGTGTCCGCCACCCCAACATCATCTGCGACTGCTGCAAGAAGCACGGGCTGCGGGGCATGCGCTGGAAGTGCCGTATCTGCTTCGACTACGATCTCTGCACGCAATGCTACATGCACAACAAACACGACCTGGCCCACGCCTTCGAGCGCTACGAGACGGCCCACTCGCGCCCGGTCATGCTGAGTCCCCGCCAGGGCCTCCCAAGGATCCCGTTAAGGGGCATCTTCCAGGGGGCGAAGGTGGTTCGGGGCCCCGACTGGGAGTGGGGCTCACAGGATGGCAAGCCCGCAGAGCTGCAGCGCAGGGTCAGTGCTGATGGCCAGCCCTTCCAGCGTGGGGACAAGGTCAAGTGTCTGCTGGACGCGGATGTGCTGAGGGAGATGCAGGAAGGCCACGGCGGGTGGAACCCCCGGATGGCCAAGTTTATCGGACAGACGGGCACCGTGCACCGCATCACAGACCGTGGGGACGTGCGTGTGCAGTTCAGCCACAAGACCCGCTGGACCTTCCACCCTGGGGCTCTCACCAAGCAAAACTCCTGCTTGGTGGGTGAGGTGGTGCGGGTTATCGATGACCTTGACACGGTGAAGCGGCTGCAGGCTGGCCATGGGGAATGGACCGATGACATGGCCCCTGCTCTGGGCCGCATTGGGAGAGTGCTGAAGGTTTTCGGAGACGGGAACGTGGGTGTGCTGGTCAGTGGGAAGCTGTGGACCTTTAGCCCCTCCTGCCTGGTGGCCTACCGGCCTGAGGAAGATGCCAACCTGGACGTAGCTGGGCGAGCCCGGGAGAACAAAAGCTCCCTGAGCGTTGTCTTGGACAAGCTTCGAGCCCAGAAGAGTGACCTGGAGCACCCAGGGAAGCTGGTGGTGGAGGTGGCTCTGGGCAATGTGGCCCGGGCTCTGGACCTGCTGCGGCGGCACCCAGAACAGGTGGACACCAAGAATCAGGGCAGGACTGCCCTGCAGATGGCTGCCTACCTAGGCCAGGTGGAGCTGGTGCGGCTGCTGCTGCAGGCTCAGGCGGGCGTTGACCTGCCGGATGATGAGGGCAACACGGCACTGCACTACGCAGCCCTGGGGAACCAGCCTGAGGCTGCCCGGGTGCTCTTGAGCTCAGGTTGTGGGGCCAATGCTCTGAACAGCACTCGGAGCTCAGCACTGCATGTGGCCGTGCAGAGGGGCTTCCTGGAAGTGGTGAAGGTCCTGTGTGAGCGTGGCTGTGACGTCAACCTGCCTGATGCCCATGCTGATACACCCCTGCACTGCGCCATCTCAGCGGGCACTGGTGCCAGCGGCATTGTGGAGGTCCTCACCGAGGTGCCAGGCATCGATGTCACTGCCACCAACAGCCAGGGCTTCACTCTGCTGCACCATGCGTCCCTCAAAGGCCACACACTAGCTGTCAGGAGGATTCTGGCACGGGCACGGCAGCTGGTGGACGCCAAGAAGGAGGATGGTTTTACGGCACTGCACCTGGCCGCCTTCAACAACCATGGGGAGGTGGCCCAGGTTCTCATCCAAGAGGGCCACTGTGATGTGAACGCTCGCAACCGTAAGCTGCAGTCCCCACTGCACCTGGCTGTGCAGCAGGCCCACGTGGGGCTGGTGCCACTGCTGGTGGATGCGGGCTGCAGCGTCAACGCCGAGGATGAGGAGGGGGACACGGCTCTGCACGTGGCCCTGCAGCGCCACCAGCTGCTGCCTCTGGCAGCTGATGGGAGCGCAGGGGACCCGGGTCCCCTGCAGCTGCTGTCCAGGCTACAGGCCTCGGGCCTTCCGAGCAGTGCAGAGCTGACGGCAGGCGCGGCTATGGCCTACTACTTAGCGCTGGAGGGCGCCGACCTGAGCTACGCCAACCACCGCGGCCGGAGCCCCCTGGACCTGGCTGCCGAGGGTCGCCTGCTCAAAGCCCTGCAGGGCTGTGCTCAGCGCTTCCGGGAGCGGCAGGCTGGAGGCAGTGGCAGCGGGGGCTCGGCCCAGGGTCCAAGACTGGTGCTCAGTGCTCCGAACACTGTAACCAACCTGCATGTGGCCGCGCCGACGGGCCCCGAGGCCGCTGAGTGCCTAGTGTGCTCGGAGCTGGCGCTGCTGGTGCTGTTCTCGCCCTGCCAGCATCGCACAGTGTGCGAGGACCTCAGCCCCGAGCCCCCGCCCCTGACCTGGACCTCTTCCGCAGACGGCACGGAGGTGGTCAGCGCAGCCCCCGCGCCCGGCCCACCGCGGCAGTTGGTGGAGGAGCTGCAGAGCCGCTACAGGCAGATGGAGGAGCGCATCACCTGTCCGATTTGCATCGACAGCCACATCCGCCTCGTGTTCCAGTGCGGCCACGGCGCGTGCGCGCCCTGTGGCGCGGCGCTCAGCGCCTGCCCGATCTGCCGCCAGCCCATCCGCGACCGCATCCAGATCTTCGTGTAGCCGGCGCCCCCCGCCTCGTTCCGGGGCCATGCCCCGCGGCCGCCCTCACGAGCCCTTTCTCTGTATTTTATAAAAAGATTGCTGGAC EMBV3_34062 TCCCTGTCTCACCCCCTGGACTTTGCCAGGCGAGGCTTACAGACGCCAGATCCTGGGTGT Gene GeneID:617453|CLDN5:NM_001076460:115_cdna Constitutive 0 NULL GeneID:617453 17 GENE CLDN5 MGC138054 claudin 5 EMBV3_25478 CTGTGACCCCAGCACATGGAGGGACATACAGATGCTTTGGCTCCTACAACAACCATGCAT Gene GeneID:369024|NCR1:NM_183365:130_cdna Constitutive 0 NULL GeneID:369024 18 GENE NCR1 NKP46 natural cytotoxicity triggering receptor 1 EMBV3_11458 GGAGGAAATTGTTTGATAATACAGAAAAGTGTGTGCTGAATCTAGCACAGTTAAAAGGTC Gene GeneID:514642|TRPM7:XM_002690928:241_cdna Constitutive 0 NULL GeneID:514642 10 GENE TRPM7 NULL transient receptor potential cation channel, subfamily M, member 7 EMBV3_21459 TTTGTTTCAGAGCACATACTCACGGGCAACTGAGAAAGGAACGCGTATATCCAGGCCAGC Gene GeneID:281627|ANXA8:NM_174241:5_cdna Constitutive 0 NULL GeneID:281627 28 GENE ANXA8 ANXA8L1 MGC137766 annexin A8 EMBV3_35326 GCTGAGCCCACCTGGCTTTAGGACTGTCAGGCTCTCCTCCCTAATTAAGTAAATAACTGT Gene BVT0102_218816 + 1 EMBV3_00536 GK000024.2:54093677-54154016 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00143430 1 XLOC_087852 NonCoding TCONS_00143430 XLOC_087852 NonCoding NonCoding - 24:54128300-54128872 - TSS107641 572 1 0 0 0 0 0 0 0 0.00361932862881352 1.03404120611042e-05 0 0 4.00207710712808e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 6.05636701397549e-05 0.000357200995117115 1.02432631482987e-05 0 4.24353460898483e-05 0 0 noncoding 0 0 0 0 -0.243054763435519 0.17313588714274 -0.0241799640231156 0.783006927814959 GTGGGGGGTGGGTTGTTAAAGATTTGCCCTGAATAGTGGAGAGGATTTCTGTTCTCCCAGAGGCCGTGTATTTACTTCTTTTCTCTCTCATTTTCTTTCTTCATCCTCCCTTTCTCTTCCCCAAGGCAAGAACAGTTATTTACTTAATTAGGGAGGAGAGCCTGACAGTCCTAAAGCCAGGTGGGCTCAGCCCTGAGAATCCTTTTTAGACGGCCTCCCCCAGGGCGCTGCGGGTTCACTGTGAGTCCAGGTTCTCATCGGTGAGCTGGCAGGCGTGTCTGCCCTTCCACAGGCCCTGACAGGCCTCTGTTCTCTCAAAACCAGCTTCTTACCCTGTTCCCTGTTCCCGGGTGGAAAAGTCAGCTCGGCTGTTCACATGTGGCTACTTATCTTCAATTCACAGTGGGTGGGGCTCTGCCGGAGGTAGGCGGGGTAGGTCTCAGGAAAATGCTTTTCACTTTAAACCTAGCGTTAGTACTAATATAGTTTAGGATCCACATGTCTTCCGTCTACAGGGGATTTGAGCCATGGCCTTTGAGATTCAAAAAAAAGAAAAGAAAGCTTGGGGTGAC TCONS_00140600 . 5' 22586 TCONS_00140600 . 5' 22586 EMBV3_00732 TCTCATGGGAGAGTAAAGGCAGTGTCTGAAGGAAACCCAAAAGAAGGACTTGCCTAGAAC Gene GeneID:525107|SYNJ2BP:NM_001035355:130_cdna Constitutive 1 NULL GeneID:525107 10 GENE SYNJ2BP MGC127520 synaptojanin 2 binding protein EMBV3_24936 CCGAGGCCCACGTCAACACCTGCTACAAACACTTCTATTACTTCGTCACAGAGATGAACC Gene GeneID:540817|MOBKL2B:NM_001046491:14_cdna UTR3_Alt 2 NULL GeneID:540817 8 GENE MOBKL2B MGC137483 MOB1, Mps One Binder kinase activator-like 2B (yeast) EMBV3_24577 TTTCTCCCTCCAGGTGTGTGGAAGCTGATTTGAGGTTCCTGAATGGAAAATCACAGGAGC Gene BVV0102_336625 + 0 NULL GK000004.2:3845993-4494963 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26950 GTCCCACGCTCCTTTTGTTCCAGCTTTCTAGAGGAGAGATTGTACATCTAACCCAAGCCC Gene BVT0102_362090 + 0 NULL GK000029.2:41624168-41625199 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03399 ATGGTGGTGTCCAGGAGCGTAGCCTTGCACCATTCACAGCTCGGTGTCTTTCCTAACATT Gene BVV0101_002647 + 0 NULL GK000029.2:25007330-25049475 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164750 TCONS_00164762 TCONS_00164767 TCONS_00164756 TCONS_00164755 TCONS_00164754 TCONS_00164757 TCONS_00164748 TCONS_00164749 TCONS_00164761 TCONS_00164760 TCONS_00164758 TCONS_00164751 TCONS_00164752 TCONS_00164759 TCONS_00164766 TCONS_00164763 TCONS_00164753 TCONS_00164764 TCONS_00164765 1 XLOC_100292 Coding TCONS_00164750 XLOC_100292 Coding Coding NAV2 29:25046622-25073358 j TSS123176 4693 1 TCONS_00164750_5 458 10 0.824836356835609 0.000993867186304344 0.00442866958761331 0.00127821115183812 0.00179293292433817 0.000790212426527386 0.00113078575885587 0.000866422749661944 1.53948215892881e-09 0.000480009563760783 5.72192110556019e-25 5.62130654948941e-44 1.34007295720195e-300 1.4257339063312e-49 3.253780315718e-42 2.04234252064623e-11 1.19097276360699e-27 1.39348836884722e-08 0 0.000471346262786318 0.00558140184044899 0.000485206011663534 8.0716094399476e-07 0.00137893982873301 1.78632175332176e-07 0.00452738180519303 0.00566068012284482 4.54035809478052e-05 1.88238321002838e-19 1.0117911421399e-05 1.01114445166336e-105 XM_005226773.1 NAV2 PREDICTED: Bos taurus neuron navigator 2 (NAV2), transcript variant 0.0 8397 99.94 0.993820583848285 NM_145117.4 NAV2 Homo sapiens neuron navigator 2 (NAV2), transcript variant 2, mRNA. 0.0 4033 79.36 0.993820583848285 TCONS_00164750_5 sp|Q8IVL1|NAV2_HUMAN NAV2_HUMAN Neuron navigator 2; 0.0 930 96.72 0.995633187772926 3 coding 0 0 0 0 -0.00106838377189322 0.994260877860237 -0.00720864329651801 0.90734741209572 CCAAGCCCAGGAGCACACAGGTGCTGGCAGTGGAGATGGATTCCAGACCACACCTCTTCCTCATCGGCTGCATTGGAGTCAGTGGCAAGACGAAGTGGGACGTGCTTGATGGGGTGGTTAGACGGCTCTTCAAAGAGTACATCATTCACATTGACCCAGTGAGTCAGCTGGGGCTGAACTCTGACAGCGTCCTTGGCTACAGCATCGGGGACGTCAAGCGCAGCAACACCTCCGAGACCCCCGAACTGCTTCCTTGCGGCTACCTGGTGGGGGAGAACACGACCATCTCCGTGGCGGTCAAAGGGCTCGCAGAAAACAGCCTGGACTCACTGGTGTTCGAGTCGCTGATCCCCAAGCCCATCCTGCAGCGCTATGTGTCCCTGCTCGTGGAGCACCGGCGGATCATCCTCTCGGGGCCCAGCGGCACCGGGAAAACCTACCTGGCCAACCGGCTGTCAGAGTACCTGGTGCTCCGGGAGGGGCGGGAGCTGACCGACGGGGTCGTCGCCACCTTCAACGTGGACCACAAGTCCAGCAAGGAATTGCGCCAGTATCTGTCCAACCTCGCCGACCAGTGTGCCAGCGAGAACAACGCCATGGACATGCCTCTCGTCATCATCCTGGACAATCTGCATCACGTCAGCTCCCTGGGCGAGATCTTCAACGGGCTGCTCAACTGCAAGGACCACAAATGCCCTTACATAATTGGCACGATGAATCAGGCTACCTCTTCTACTCCCAACTTGCAGCTTCATCACAACTTCAGGTGGGTGCTTTGTGCCAACCACACGGAGCCCGTGAAGGGTTTCCTGGGCCGGTTCCTGCGGCGGAAGCTCATGGAGACGGAGATCAGTGGGCGGATGCGGAACGTGGAGCTGGTGAAAATCATCGACTGGATTCCCAAGGTCTGGCATCACCTCAACCGCTTCCTGGAGGCGCACAGCTCCTCGGACGTCACCATAGGCCCCCGGCTCTTCCTGTCGTGTCCCATCGACGTGGATGGTTCCAGGGTGTGGTTCACTGACCTGTGGAACTACTCAATCATCCCCTACCTCCTGGAAGCCGTCAGAGAAGGACTCCAGCTGTATGGAAGGCGGGCCCCCTGGGAGGATCCCGCCAAGTGGGTGATGGACACCTATCCTTGGGCAGCCAGCCCACAGCAGCATGAGTGGCCCCCTCTCCTGCAGCTCCGGCCCGAGGATGTTGGCTTCGACGGCTACTCCATGCCTCGGGAGGGGTCAACCAGCAAGCAGATGCCCCCCAGTGCCGCTGAAGGAGACCCGCTGATGAACATGCTCATGAGGCTGCAGGAGGCCGCCAACTACTCCAGCCCCCAGAGCTACGACAGCGACTCCAACAGCACCAGCCACCAGGACGACATCCTGGACTCGTCCCTGGAGTCTACTCTGTGACGGGGGCCGGGACCCGGAGCCCGCCCTCCTTCCTGTCCAAGCTCCCCCATCCTCCTCGCCCTGCACCGGCCTCCCCCGTGCCCCCCGAAGACGCCCTCCTGAGCCAGCCCCCGGCCGCCTCGTGAGCACTGCGGGGAGCCCCACGCCCCTCCTTGCCCTCCAGCCTTGACCTGGGTGCAGACGCCCCGGGCTGGCTGCCTCGGGCCCGAGTCCTTCACAGCGAAAACTGCCCTATCTTCCGTTTTCATTACGGTTCTGCCTTGTTGCCGTGACCTCGGAAAGGTACTTCTCGGGAAAGGACCATCACCGTTGAAACGAGAGGGTGGAAAACAGCAGCAGCAACAAACCCTCCTGAAGCTCTGAGACCAAGCAGCCTCCTTGCCATGAGCTGCCCGGAGATGGAAGCAGAGTTAGAAACGGAGACAGCAGCCCGGGTCCACCCTCCCCCCCACCCCCAACCCCGCCGATGCCGTTCCACCCTGCCGACGCCCTTCCAGCCCCCCCGGTGCCCGCCGGGGTCCTTGCTCTGGACGCCCTCAGCAAACCGCAGAGCCACATCACAGGGCGACCTTAGTAAAAGCAAATCGTGCTTTCTCTTCTGTTTGTTTTCGAAATGGTGCTCTCCTTACCCGAGAGGTATTCCGCCTGTCCCAGCTCACCCCCACCTCTCAGATCTGTCAGCCTCCGGTTCATCCTCCAGCGAGAGTGCACGGCCGAGTGGACGCGGCTGTAAAGGCCAAGCTGCATGTGTCCGAGTCCTTCTCCCACGGAAACGCGTCCGGTCTTGTTCCTGCTAACACTGTGTACAGTCAGAACTGGTCTACCTTGGCGAACCCATCACCTCCTTTGAAAATGAGGTCGACTTCTTCCTTTCTGACTCTTGATTTTGAAGGGTTTTTTTTTCCCCTCTCCTCCCCCTCGTGGTCAGAATCCATCCTTTGGTGAACGTGAGAACCGCAGGAGTTAGCTTTTGGTTTGGTCCTGCTGAGTTTTGGTTTTCAGTTGTCCATCTTCATGGTTCTACACACTCGCCGCCTCCTGCTGGGGCTGCGGTCGCTGTGCCCTTGAAGGTGGGGCCAGGACCCCATCCTCAGCGCGTGGGTGAGCGGGACCTTGCCTTTCCTTCTCGTCCCTGAGGCCACAGGACGCATGTCGACACCTCCAGCGTGCCAGCCCCCAGCCTCAGGGCCGGGGTGGGAGGTCACCTCGCAAAACACTTGCACTTTCCCCAGTACCAACGGGACATCACACAAGTCAACAGGGGGGGGTGGCCGCCCCCTTCCAGAAGCCGCAGCCTCCGGTGATGAGTCTTGCCTGACCTCTTCGGTGCTGACCTTCCCAAAGCGATGCCTTACTGGTTTTGTATTCACCGTGATCATTGTTGAGTGTTGTGCCTGCCTGGGGTCTGTTTTTCTGTTTTCCACATCAGAGCAAACAGGGCTAACAAGTCATGTACTCACTAGGAGAACTCAGTTAATGTGACTTTTCTCATCTGAAAGACTCTTTCGTGTGGATGCGCGACTATGGAAAATGCAAAAGGAGAAAAAAAAATCAATTTTTTTTTTAGGTTCTTATCAGCTAACACCCTGACTAGACAGCAGTCTGTCTTGTGCAGGAAAAGGCAAAAGTTCCCGCAGTGTTACATGGCATTGCCGAGTCATGCTCTGCTGGTACATGTCTTCAATGTGCTGATATTTTCTCTACAGAGTGTGGTCAGTCTTTGAGTCATTTGTTTCTGTTTTATTTTTATCAGACCCCTAGGGGGGGTTTCTCTATTAATGATCAGGGTTTTTAACTCCATTTTTTTTTTTCACATTTCTGTTTCCAAACGTCCCTCTCCCAAACATGTTATTTTCTTCCCACAAGAGCTTGACCTGAAACCACTCACATGACATTGGATGACACCATTTACTTCCTCTTTAAAATGAAAAGTGAACTGTGTCCCACTAACAGGTGAATGGCAAACCTCTCGACGTGCTCTTTTCTTTAATCTTAATTTAAAAAAATCTTAGCAGACTGGGTTCTGCTAAGCCTTCCTGAGTCATCTGGGTGTGTGAGTGTGTCTTACTGTTTTGTTTTTCATAAAATGTTCAAAGCATGTATTTTAGCCTGTGACCTCGGGGCCACCACCCTGAGCCTTCTGTGTAAACCTGAAGAACAGTCCTCCTCAGTCTTGTCTCCCGGCGATGACCTTATACGCTCATACTGTGAATTTGGGAGGAGGCACAATGAACTACTCCTCCTCATGGGCAGTTTTCCCAGTCACCTGGTGAGTAGACACCTGCCAATATCCTTTGAAACGTTTCTTTTGATGACTCCCTCTTCACTCTTTATTTCTTGCCCCTCCCACCGGGGCTGGGCCCAGCGCCGAGACCTCTGTCCCTGGTGCTGCCTGGCAACCGCATGGTGGTGTCCAGGAGCGTAGCCTTGCACCATTCACAGCTCGGTGTCTTTCCTAACATTTGGGAAGCAGGGTTGTCTGATATGCACATTTCTTACTTTAGTCCTGCTTTCCTTTTGTGTCGCTCACCTTTGACAAAGTGACTTTGTGCTCATTTAGGGCTCTGTCCGAAATGCTTCCATTTTTGCCTTTTTCTACAGTTAGGCTAATTTTGAAAATGTCTGAAATTCTATGCAACATTTGTGTTGAGTTACCGATGGAAGCCAAAAGTTTTCTTCCCAAACTGCCGAGAATTTTACAGGCCATAAATGAGATGGGAATTCCTTTTAATTTAAGGAGGTGGGTGGGACAGGGGTGGGACACGGAACGAGACTTACCTAGATCTTTGTTGTAATCTTGGGGACATTTTTTTATTTTATTGTTGATGCTTAAACTTCAAAATTCTGTGTATTCAGATTTGATCGTGGCGAATCTACTTCAAAAGAAAAAAAAATAATCCAACTTTGTGGATATGAAATGAAAGGTTTGCTGTTTTGATCTAGTTGTTTCCAGTGGAGCAGTTTATGAAATATGTTCTATAAGATGTACATTTTTTCATTGTAACATAGAAATTGTAAATAATTGATTAAAGTGCTGCATTTTGATGAATTTTTTCTAGCCATTTTTAAAGAGAAAACTAGGAATTGAGTATTTTGTGTACGGTATGTTTCCTTCCTCCCTCCCTCCCTCCCTCCCTATTTAATTTTCATTGATCATGAGGTTTTTGGATTTGCCAATGATCTGCCGGAGATCATGCCCCACGTCATAGAGAATAAAGCTGATGATTGTACCAGTCTTAAATTATTCATGATTCAATAAAATTGATGCTTATTTATTCAGA EMBV3_27593 CAAGTACATCGACAAGACCATCCGAGTGAAGTTCCAGGGAGGCAGAGAAGCCAGTGGAAT Gene GeneID:509920|LSM7:NM_001143862:48_cdna Constitutive 1 NULL GeneID:509920 7 GENE LSM7 NULL LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) EMBV3_10844 ATTTGAGGTGTCGTCTCCCTGAGCCTCTCCCCAGATTGGCCTTTGAGGGCTTCTGTAGAT Gene GeneID:527921|RASD2:NM_001081594:37_cdna Constitutive 0 NULL GeneID:527921 5 GENE RASD2 MGC142951 RASD family, member 2 EMBV3_43579 CACTTTGGACCTCAAGGACTCTGAACTTCTCCAGCCTCCAAGCTGCTCCTGCTATTGAGA Gene GeneID:518632|NUAK2:NM_001079597:67_cdna Constitutive 0 NULL GeneID:518632 16 GENE NUAK2 NULL NUAK family, SNF1-like kinase, 2 EMBV3_18827 AGCTGCAGGAGACCCAGCACCTGCTTCATGATTAACCTGGTGATTAATCCTAAGGATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19381 CTTGCTGCTGAGCCTTGGAGAGTATCCTCCCTGCAGTCACTTAGAATATGGATGTACACC Gene GeneID:540072|RFWD3:XM_002694723:28_cdna Constitutive 0 NULL GeneID:540072 18 GENE RFWD3 NULL ring finger and WD repeat domain 3 EMBV3_38219 TACTAGGTTCAAAGGCTCGTGGTGGGGGAGGCCCCCAGCTACCCTCTTGTCATCGCTCCT Gene GeneID:616379|SEPN1:NM_001114976:287_cdna Constitutive 2 NULL GeneID:616379 2 GENE SEPN1 MGC138923 selenoprotein N, 1 EMBV3_40348 GGTTGCCTATTGGGAAAAGACTTTCAAGATTGACCTCTTCAAGCCACAGATTGGGGTGGT Gene GeneID:528555|CASQ2:NM_001035374:59_cdna UTR3_Alt 2 NULL GeneID:528555 3 GENE CASQ2 MGC128222 calsequestrin 2 (cardiac muscle) EMBV3_38720 ACGGACATGTACCCTATGCCCTGACCATTGACTCTGGACACCATTCAAACACTGTAGACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01996 GGTCTCCAGTCTCCTGGCCTGCCTTGCAGATTTTGGCTTTATCAGCCCTACAAAAGGTCT Gene BVV0102_199737 + 1 EMBV3_41189 GK000026.2:3590998-4666726 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149908 TCONS_00149914 TCONS_00149907 TCONS_00149911 TCONS_00149912 TCONS_00149913 TCONS_00149905 TCONS_00149910 TCONS_00149906 TCONS_00149909 1 XLOC_091766 Coding TCONS_00149905 XLOC_091766 NonCoding Coding - 26:3774385-3777242 - TSS112432 267 0.441947565543071 2 0.907212885154062 1.17453736128428e-128 0.000408360962744256 0.00017245598417417 5.62151635256974e-09 0.000229862711152843 7.64326211051166e-11 6.78380975573536e-05 2.71240275256007e-104 5.91017779878743e-05 1.31424442733517e-05 1.21079961892139e-31 1.19063216891734e-44 0 3.14659169688741e-08 7.82464473620829e-28 0 0 0 0.00337047407199753 0.00254271144499114 0.00314244457668824 0 0 0 0.00114562561223143 0.000791521208538283 0.00186611171777798 9.88111219380273e-26 0 0 XR_249749.1 LOC101929505 PREDICTED: Homo sapiens uncharacterized LOC101929505 (LOC101929505), misc_RNA. 4e-11 71.6 76.77 0.363295880149813 0 noncoding 0 0 0 0 0.0520383605819285 0.667119373086058 0.0390673120964707 0.417967122338716 AAGAGGGAGGAGTCTTTTCTCTCTTCATTGCCCTTTGAATCAAGACTGCAGGTCGACTCTACCCTGGGTCTCCAGTCTCCTGGCCTGCCTTGCAGATTTTGGCTTTATCAGCCCTACAAAAGGTCTCATTTTCCCACTTGTTTAGCTCATCTTTTCTCACATTCAAACAGATGAAGATAGCAACTGTGCAGTCAGGATTTTGCCTCAGATCAAAACATATTCCACAAAACATCCTTGGACGTCTAGAAAAGAACAGTCATCTATATG TCONS_00149913 s 5' 0 TCONS_00149911 TCONS_00149913 s 3' 2591 EMBV3_07473 GAAAGGTCTGAGAGAGTTGATCAGGGTAGGAATGGAGGTGAGCTCTAAAACCCTCCTGTC Gene BVT0101_037815 + 0 NULL GK000030.2:98486033-98674537 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245281 1 XLOC_150677 NonCoding TCONS_00245281 XLOC_150677 NonCoding NonCoding - X:98513271-98622825 - TSS184150 1101 1 TCONS_00245281_1 80 0.344232515894641 2 0.989968325833158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000774833287179907 0 0 0 0.000881413443556447 0 0 0 0 0 0 0 1.09214288080526e-05 XM_603911.6 KLF8 PREDICTED: Bos taurus Kruppel-like factor 8 (KLF8), transcript 0.0 1047 100.00 0.525885558583106 0 noncoding 0 0 0 0 0.0520946459583962 0.667619628981624 0.0338903399460023 0.544726529727762 CGACTGTGCAAGCTTCAGGGCAGAGGGTGAGAGAAGGCCGCCACTAGCAACTAACAGCAGCTACCTAAACTCAACAGAGAGGTCGGAGGTATTGTTGGAAATGCCACGAACCCCGTGATTCTGTCTGCCCGCCAAAGAGAGATGAAAACCCAAGTTGTGCGGTGCAGCTTTAAAGGGGCTGGTGATTGACAGAATGTGTAGCAGTGGATGGGGTGGAGCCGCTGGGTGGGGTCTGGGACAGGCAGCTGGGAGAAACCAAAAGGAAGAAAAAAGAAAACCGTAGCCCCTGAAATCGCTAATACCAGGGGGAAGCTAGCCAGAAAGGGAGGACAGGAGGGTTTTAGAGCTCACCTCCATTCCTACCCTGATCAACTCTCTCAGACCTTTCTATCTCCTTTTGAGATAATTAAAACCTGCTGTACACCGGCCCTAGTCGGTGCCCTTTCCTAACTCCACTGAATTAGATTTGTAGTACGAGTGAGTGAAGACCCCCGGTCCACCACCTCAACCCCGGCCCCGCCCCATCGGCCTGGCCCGGGGCTGGGAGCAGAGGATGCCTTTGGAGGCGCAGAATCCGAAATACTCATTGTTGTTTGAAAAGGATTTCAAAGGATGAAGAGAAAATTTGAAACCATGGGTAATAGAAGAGACATCATCAAAATGGAAGAATAGGAGTTTTCTACCATCTTCCTCCAAATTTGACAATGACCCACAGATGAGAGGGACTTTGTGGAAGTCTCAGAGTCCAGTGGAAAAGATACAGCTCACTTCTGGATCAAAAATATCCAAGATTTGATGCACTGAAGAAAGCAAGAAACAACAATTTCACTTTACCCATGTCTTGTCTTCCTCCAAGAGGACAAAGTTCAGTGCCAAAAGAGCCCTTTTGGGCTGTGATTTTTTTTTTTCCCCCATAGGAAAAAGTGAGACCATGTCAGTAAGCAACCAGCTTCTGTAACTGTGTAGGATGTTGCCAAAGAGACCTGCTGCTTCTTTCCCCATACAGAAAACTTAAGTGAGCTGCACATTTTGGGGGTAGGTAAGGTCTGAGACAACACTAGCCAGGGCTTTCAGAGGGCATCAAAGGTACACATATCCCAT TCONS_00245275 TCONS_00245276 TCONS_00245277 TCONS_00245278 TCONS_00245279 TCONS_00245280 s 3' 27240 TCONS_00245275 TCONS_00245276 TCONS_00245277 TCONS_00245278 TCONS_00245279 TCONS_00245280 s 3' 27240 EMBV3_05056 CTGGTGGAAGTGAAGGGACCCCATGACCGGCTGTCACAGAAGCAGATGATCTGGCTGGAT Gene GeneID:508171|MTMR15:NM_001164670:15_cdna Constitutive 0 NULL GeneID:508171 21 GENE MTMR15 NULL myotubularin related protein 15 EMBV3_28491 AGAGTTTAATAATGGCCAAAGAGAACTGCATACGGCCCAGTTCAAGAGACGGGAGTATCC Gene GeneID:613543|CENPJ:XM_002691852:140_cdna Constitutive 0 NULL GeneID:613543 12 GENE CENPJ NULL centromere protein J EMBV3_34586 TGCCCGCACTGTAAGAAGGCCATTCCACACTTTACTGCCGCTGCTGATGCCTTCAAAGAT Gene GeneID:511603|PDIA5:NM_001046091:53_cdna Constitutive 0 NULL GeneID:511603 1 GENE PDIA5 MGC137200 protein disulfide isomerase family A, member 5 EMBV3_04612 GCATCCCTCAAGACTGTAATGTTGCTGGGTATATGTGATCAGACACCAGAGGGCTGGGCA Gene BVV0101_007732 + 0 NULL GK000016.2:3250257-3301670 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00068524 TCONS_00068525 1 XLOC_041719 Coding TCONS_00068524 XLOC_041719 Coding Coding NUCKS1 16:3296106-3329496 = TSS51290 7635 1 TCONS_00068524_4 243 0.0426981008513425 7 0.771541525652161 0.000239574491460641 0.000561460264452755 0.000361300182952976 0.00047830947909163 0.000351801877182343 0.000101823279494351 0.000402575724594593 0.000480485892303331 0.00112466290385874 0.00046808760864748 8.15134301033692e-05 1.60543733412397e-05 4.66752044297522e-05 1.12965667767563e-06 2.77230050829742e-05 0.0223997094263876 0.00868974635807413 0.0198425828774183 0.000217290564949301 0.000650005122933158 0.000435871517702557 0.00729065943377007 0.00823770602605706 0.00920987071732939 0.000141997380296642 0.000734513867469721 0.000300264999100411 0.0019025448327862 0.000859091268728185 0.0010257532456893 XM_005216661.1 NUCKS1 PREDICTED: Bos taurus nuclear casein kinase and cyclin-dependent kinase substrate 1 (NUCKS1), transcript variant X2, mRNA. 0.0 1.144e+04 99.95 0.831958087753766 NM_022731.4 NUCKS1 Homo sapiens nuclear casein kinase and cyclin-dependent kinase substrate 1 (NUCKS1), mRNA. 0.0 3065 78.35 0.489063523248199 TCONS_00068524_4 sp|Q29S11|NUCKS_BOVIN NUCKS_BOVIN Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1; 3e-166 464 100.00 0.995884773662551 0 coding 0 0 0 0 0.128714699936449 0.30662559580372 0.0103996415896155 0.888005753927875 GACCGGTCGTTCTGGGGCGGAGCCCACAGGCCCTAGTGGGTTTGGTTGTCCGGCGGCTTTGGCGCATTTTCGGCTGGTTTGATTCATCCATTTTGAAGAGACTGGGGAGCGGGGGGCTCGTCTGGTTAAGGGGCCCTGAACCAGGGAGCGGCGGAGTTTGAGAAGCCAGCAGCTCGGGGCTCGGCGGCAGCGGCCTCCTCGGCCGAAGTTGGGGGGGGTGGGGCGCCGAGCGCGCGGGGTGGGGGGGGTCCTGGTCTTTGGCTCCTCGACTCGGTCCTGTTTCGACAGCGAACATGTCTCGGCCTGTCAGAAATAGGAAGGTCGTTGATTATTCACAGTTTCAGGAATCCGATGATGCTGATGAAGATTATGGAAGAGATTCAGGCCCTCCAGCTAAGAAAATTCGATCATCTCCCCGAGAAGCTAAAAATAAGAGGCGATCTGGAAAGAATTCACAGGAAGATAGTGAGGACTCAGAAGAAAAAGATGTGAAGACTAAGAAGGATGATTCTCATTCAGCAGAGGACAGTGAAGATGAAAAAGAAGATCATAAAAACGTGCGCCAGCAACGGCAGGCAGCCTCTAAAGCAGCCTCTAAACAGAGGGAGATGCTCATGGAAGATGTGGGCAGTGAGGAGGAGCAAGAAGAGGAGGACGAGGCGCCGTTCCAGGAGAAAGATTCCGGCAGTGATGAGGATTTCCTAGTAGAAGACGATGATGATAGTGACTATGGCAGTTCAAAAAAGAAAAACAAAAAGATGGTTAAGAAGTCGAAGCCTGAGAGAAAAGAAAAGAAAATGCCGAAGCCCAGGCTAAAGGCCACAGTGACGCCAAGTCCTGTGAAAGGCAAGGGGAAAGTGGGTCGCCCCACAGCTTCAAAGGCATCAAAGGAAAAGACTCCTTCTCCCAAAGAAGAAGATGAGGAACCAGAAAGCCCTCTGGAAAAGAAAGCATCTTCAAGCCCTCCACCTGAGAAATCTGGGGATGAAGGTTCTGAAGATGACGCGCAGTCTGGGGAAGATTAAAAGTGATGATGGTCTGGGGAGAGATTTTATTTAAAAAACAAAAAAAAAAAAAAGAGAAAAAAAGAAAAAAAAAGAGGGAAAAAAAAAGAAAAGCTACTTAAGATAGAATATGGTTTTGGCTATGGCTTGACTCATGGGCTTTCAATGCTTTTTTTCCCTTTTGTTGAAAATAACATTTTCTTCTTTTCTTCTTCTTTTTCTTCTTTTTTTTTTTTTAAAGAAAAGCATTGTATGTTTAATTTACCTTTTTTGTCTATTGGTCTCTTCGTCATGACCCCCTCTTCCCCCTCCTCCCCCTTTCCCAATGAAAGCCATGTTAAATTAATCACTGGATTGACTGCTTCATCTTTTTTATTTTTAATGGAGGGTATGCCACAGTTGTAAAGCAATAAGATTTGAGGTAAACACTATGAAAATTTTGCTTTTTGCTAAATGGTAGCAAGTTGAACAGGAATCGAAAAATGTAGAAGGTTTTAGTTAAAAGTTATTGCTTCTTTCTCTACCTGAATTTAAAAAAAAAATCAGTTGTCATCTAATACAAGTTTATATTCTATATACAAAAATATGGATGTCTAAAAAATCTAGATGTTGAACTCCCACCGATGGGGCAGGTAGGAGATAAAGATGAGTTCTGAACTGCTACAAAAGGCATTCATGTTTTTTACTGTGGGGCAGGGCAGGGAACTGAGGTTACCTGACCCTGTTTGGGGATATAGGTTTGCTTGTTTTTAGTTTCATCACCTGTTATCTCTAGGAGACTCGGAGCCAGTGATCCTTTTATTCAGCTACAGTCTTTAAAGAACTTAGAAGCAAGGGCCGCCAAAACTTACATCTTTCTTGATTTCCTATCTCATTCTATAATGGTTCATGTTTTTAAATATATATATGTATCTATTCTGTTTCTTGGATAAAAAATTTTACCAAGGATCAAAAGAAGAAACCCTAGAATTAAAATGGGGCGATCTATATATCACAGTGGATTTCTTCTCAAACTGACAATGTTTAGGTTTTAAGCAAAATAAAGTGCCAGTTAATGTGAAACTCAATCACAAAGACTTGAGATTTTTGCTTTATGGAAACAGAGAATTGAAATTCTTTTATGCTATAAATGTGCACTCAGAGTCCATGAACCATGCTCTGCTTTTGCTGAGGGATGGAGTGTTCTCCTGTCAGGCCTGTCCTTCCCGCCTCTTGGTAGAAACGTGGTGTGGAGCGTCTCGGCCTCCTGCTGGTGCACAAGGCGCTCCTGCACAGCCCGCTCGCAGCGCCCGCCAGCCCTGCTCCAGTTCATGGTTTCTCCTGGTTCCGTTCTTCACTTCATATCCTGTACTTGATGGGAGTATGTGACGTGCTGCCCTGACACTGTTCAATTAGCGTCTGTCTTTATACCGGTGCCCTTGCTGACCGCATGTCGCTTACAGCAGCAGTTTACGGGGCTCTGCAGAGCTGGAGAAACCATGCATCCGGGAGGCCTGTGTGCAGGGGGTAACAGACCAGTTACAAGCCTTATGAAGGTAGTCAGGAGACAGATCTGTGGGTTTGCTTCTCCACGTTCTGATACTCTGAGCTAATGGGAGCAAGGTTCAGGGTGTCTTAGTGTGCTGATGGGCTGCCCAGGTGGCTAAGTGGGTAAAGAAACTGCCTACAATGCAGGAGACGCTGGAGATACGGGTTCAGTTCCTGGGTTGGGAAGATCCCCGGAGAAGGGCGAGGCAACCCACTCCAGTATTTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCCGGCTACAGTCCATAGGGTCACAAAGAGTCAGACGTGACTGAAGCAACTTAGCACAGGACACAGTGTGCTAATAAATTGAAAAATCAGTGAAATTTAACATTTCCTTTTTATCTGTATTTGCTTCCTCAGCGTTTACTAATGCAGTTTTCTTTCTATCTGCTGTTACAGGATATTTTTCTCTCAAACAACCTGGCTTTCCTACAGATGTTCATAGAAAAAAAGGTTATTTAAGGAATATTTTTAAGACACTGTAAGGAATATCCTTACTCTGATTTTTTTCTTTTTTTTAAAGAAAGCACCAGTGGCAGAGAGTCGTTTCACTGTTGTACTGTGGGAGTTAAAGAATGAATTTGGAGATTTTAGTACTCGGCCAAATATGTGAAACTTGAACATAAGTAGCAATTGGACTATTCTCTTTCATGATGGTTGACTTCACAGTTGTGAACTTTGTAAAGAGGTGTTAAAGATAATTCCATTTGCTTTATTGGTTTGTTCAGGTATTTTAACAAGAAGGTTTGTGTTCACATGTTTTAAAAAACCTATCAGTGTTTCCACCATGCACTTCTGTTTTTAGGGGTTTATAACTTTAAGTCTTAACATTCCTAGTAACGTGTGCTTTCCTCGCGAAGACTAGGGGGAAGGGTCTTTTAAAACTTTAGCCTTAGTATTTTATGTAATAGTCTCTTTAATATATTAATCTGCACTAACGTTTCTGTGATATATGCACATCCTTTAGAGTAATCACATCCTCTAGGTTATTTGTGTGCATTTGGTTGGGCTTTTTGTTTGGGATCCCTTTTTTAAAGGTTAATTCATGAGATTAAAAAATGTATATTTCTGATAGACTGGACAAAAGGATCTGTGTCCCCAAGAGAAACAGGCTCTGAATGACCTTTGTTTTCTCCAGTTTTTGCTGATAATTTAAAACACGCTGGTCTTCCCCTCAAATCACGCACGCAAATAGGACAGCTGTGGTGTCTCAGCTGGGAACAGGTGCTCAGCAGCCAGGCTGACAGTGGTGTCGGTCGGGCTGCTGGGACTGCCCATTGGCACCGCCCCCGACTACACGCCCCCTTTCTCTAGAGCGCCTACGAGGACTTGGCGGCAGTGCTCGCTGTCTTGTTTTGCAGCTGCTCAGGAAGTGGGACGTTGACTTTGAAAGTGCTTGTTTGTGTTATCTCAGTTCTCTGTTAGCTCTGTTAGGTTTACCTCTGGAGCGTGGATTTCGGCAGCTACGCTGACTGACACTACATTCTAGTTCTTCAGATTCTTTTCTCAGACTTCCCTCCCCAACACACACAAACGTATCTGTTGTAGCCTGCTGCTGCTCTTCGCCTTTCCCACCTCAGACTGGAATCAGTGGAGTGGGCTCGAAGGATATGTGTTAGTTTTCATAAGGGTAGCTTTGTCCTGCGTTGTAAAACATTTCTGCCTCTCATATCTCTGCTCCCTAATGAGTCCAGGTAGGGAAATTAATGGATGTTTTCCTCCTTTAGGGAAGTAGTGAGTGGAAATCTTTGCATCTGGAATAGTAGTTGATTTTCCATTATGGAGCTTTTGGTAACCTTTTTTGTTTTTTCTCATAATAACTGGTTTGCTCCAGGCTCAGCCCTCTCAGTTCAGTACTTATTCTTGGTACTGGTTCAAACAGCATTTTCTTACAGGTAACTAGTCAAGAGTGGAATTCGAGGTTAACAGTCCAGTGAAGTGTTTGACATTCTTACGTATATGATCAGCTAAACTGAAGTTCACACTTTTTGGGGGTTTGTTTGCTGTAAACATTGAAGTGAGTGGGTTTTAGAGTCCTTACTGGGGGAAGGGAATAGTGCCTGTTTTTCCTTTTCCTTTTCTGTAGGAGATGCTTTGAGGGTGTCAGAAAGGCGGGAGCAGAAATTAATCCCAGGAGCTACAGGGAAAGCTTTATAAAAGGTCATGTGACCATCGTGGCTTTTATGGAGAAAGGGAGTTTTGATTTGAACACTTCTTTCTGTGCCTGCATCACCAGTAGCTGTGCCTAGAAGAAGCTGTCACCTTAGCAGTTTGGAAAGGCAGAAGCCTGGCCTCCGGTTTTTATGACATTCAGATAGAACAAGCAATACTCATTTTCTGCCAAGGGATAGCTCTTGAGGTTAGAGAGTTGTCCTTTTCTCTGTGCATGGAGTTGGGTTTATTTGAAAAGGGAGTTAGTTTATTTGAATATTGGGACGTCAAACTACTTAAAGCCAAATTTCAATCTGCAACCCATTTTCCCTTTTTCTTGAGATAAGCTTGATACAAAATGAGTTTTCTTGACTCCCAAATCCCTAAGTTACACTTTTTTCTCAAAGCCTAATTCAAAATTCACAGTGGTGCTTTCTGTGTCTTAACCACTATTGGAGAAAAAACCCTGTAAACCTGCCTGTTGCCATGTCGTGGAGCGACTGGACTGGTGACATCTGTAGGGCGCGCTCTGTGTGGCTGGTGGGACGCCACCATTGTGCATACACTTTGTACATCGGGGTGAAGGGAGGGTTTTCTAGATTATGGGGGAGGGCAAAATTGGGATTTTTTTTGTTGTTCCTTTTTTGATGGGATGTAGGGGTATAGTACTCAGTTTATGCCCTAAATAACTTGTATAAAAATCCCTGAAGTATTGTGTGGGTGTGTGTGTGAGTGTGTGTTTGTTATATGTCTGGCAATTAAAACTTTGTCTTCTGGAAATTAGCGAATTCTCTTTTTTTCTCCAGAAGTGTTTGTTACAAGATTTGTAAATAAGAGCTCTACTTAGTTTGTTTACCAAGAACATGTTGCAGCAAACCTTTTACACCTAATTCCCACGAGGTTGAAGTAACGACTTTTAAGATTTGCCAGGGTAAGCAGCAGCCAGGTTCTCAGTCATTGTTGGCCTTGATTCATCTTTCAGACTTCATTTTCCCAGCTCTAAAATTCCCAGTATTCCTTAATTGTAGTCCTTTTATGTTCTAGAAGCAGGAAGGGGGAAAGAGAAGACCCTGCTTAAATGTATTTAATTGTCCATGGGCCGAGGCCCGGGCATCCCTCAAGACTGTAATGTTGCTGGGTATATGTGATCAGACACCAGAGGGCTGGGCATTCTTGCAGCACCTTAACAGTGCTGATACCTGCAGCATGGTACTAAGGAAGTTAAAAGTTTGAATGTAACCACTTTATTTAAAAGTTTTTTTCTTTTAATTTAAATGAAATGGGGGTTGAAGTGAACATGATTTTGTTGACCATGTCCGTGATTTCTAGATGCAACATGCATTGGTAGACTTGTGCGATGGTCTTTTGTGATACTTAATTTTTACATATCCCAGTCTCTGTATGTATCTGCATAAACAAAGATAAAACAAACTCCTGCTTTCTTTTATTGAAGGGTTTCCAGGACTGCGTGTCTGTTCCTGAGCTCTGTTTTAAGTATGTGTATCCTTTGCTTGTATTTTGTATTAAAAAATAAGAAAAAAGAACACTTTATTGTTGAGCATGTTGGCATTGTCCCTTTTATTTTTTTCTCTTTTTGGGACATATGAAGCAAGTTATTCTTTTTCTGTATCTTTTTTTCTTTTGTAAACTTTTTTTGTTTTGTTTAAAAATGGCTTTATAAAAGGGCTTTTGTAACCCAGATGCGTGCTCTGTGTACTTCTTGTGATACTCAAGCGAATACACTGATTTACTATACAACTGGGCACCTTGGCCTGGCACCTCCCAGTCTAATTTGACTTTAGGGGGAAACTGCTAGATGAATGAATTCTTTAGAAATTAGCGGTGACCGTCACTGTTGTTGGTAACAGGAAAGGTATGTTTTGTCTAAACTAGGACTGGAGTTAGGAATCAAGAAACAGACTCATTAACCTTTGATTAATCAAGGGAGCACGAAGCTGGATGCAAGGGGAGTCCTAGTTAGTGCTTTCCTCACGTTCATGACCAGGTTATGAAGTCTCACGAGGGCAAAATCCTTTCAACAATCATGTAATGAAGAATAATGTTTATATGTGTAAAATAGACATTTGCATTCAATTTCAAATACTGTAAAAATTACACTCTTGCAGTTTACAGTTAAATATTACCTCTTTGATGGAGAATATGGTACAAGATATTGTAGGTATTAGGGATTTTATAGGGATTTTATCCTTTTCAACCTTTCCCCTGATTTACATTCTGGCCTTGTCATCCAAACGTAATTCACATACAAACCCACCTTGGCTTTGAAATTCAGTGCTTTTTGCATGCTGTTACCCTTTAGTGACTGGCTAACTTGGCATTTATTTTTTATAGAGTTGTTTGTTTCAAGCCAAAGTTTACTTCATAAGAATGTTGACTAGCCACTTTTCCTTCTGTCGCTGTTTTATGATTAACATCAGATTTCTGCTTGAGCACAGTGCTGAAGAAATAGTCTGGTTTACAGGACTTCAAAGGCCATCAGGCCAGCAAACACCAGAGGCGTAGTTTATGTTTGGTGAGACACATTTGGAACTCCCTCCCTCCCTCGACTCCTATCTGTGAGCATTACTCTACAGTAATTTAACATTGCAGCTCATTTAAAAAACTGAGCATTTTTAAAAATTTATTTTTGATAGAAGGATAATCACTTAACAGTACCATATTGGTTTCTGCTTATGAAGCATTTCTATTTAACATAGTACCTCTTTCAGTTTTCCCAACAACTGAGATTGCTCAGATGTTCCTCCAATTTTGTAGAAAATAAATTGGCTCAGGTAGAATGTGATTTAATGTGGCTAGTATGTGACAAGGCTTTGGATCAGGTCATTCTTTAAACTGTCACAGCTGTTGGTTCTAAAACCAGCTCCTTCGTACTGATGATAAACTTTTTAACATATTCCTCAG EMBV3_35181 TTCAGGACGGAGGGGGCATGTGTATACCTGTGGCTGATTCATGTTGATGTGTGACAGAGG Gene GeneID:404072|CCL11:NM_205773:194_cdna UTR3_Alt 1 NULL GeneID:404072 19 GENE CCL11 MGC137967 chemokine (C-C motif) ligand 11 EMBV3_28212 TGGCCATTTGTCGCCCCTTGCACTATGCTTCCATTCTCACCAACACAGTCATTGGCAGGA Gene GeneID:508595|LOC508595:XM_002693322:189_cdna Constitutive 0 NULL GeneID:508595 15 GENE LOC508595 NULL similar to olfactory receptor Olr69 EMBV3_06957 TTCACATCTAAGAAGAATTGGAAGGTTCAGGTCACAGACTTTGGGTTTGCCAAAAGAGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12219 ATAGAGGAAGCACTGCCTGGACCCCAGCCCTAGCTCTCAGTCTGAATTTTGCTTCTCAGT Gene GeneID:789903|TTC19:XM_002695862:338_cdna Constitutive 2 NULL GeneID:789903 19 GENE TTC19 NULL tetratricopeptide repeat domain 19 EMBV3_41592 TGTCCCTGCTATTACTATCCCAACCGGGCAGGCAGCTCAGACCGTGCATCCTTCGTTATT Gene GeneID:789044|DNAH2:XM_002695833:220_cdna Constitutive 0 NULL GeneID:789044 19 GENE DNAH2 NULL dynein, axonemal, heavy chain 2 EMBV3_01234 CTGACCGGGAATTGGAAGAGCTTCTGGAAAGATGCCCTCTTCGCCTCCCAGGAGAAGTTT Variant GeneID:521522|PEX19:NM_001034540:290_cdna 83^192 1 EMBV3_16379 GeneID:521522 3 GENE PEX19 MGC128107 peroxisomal biogenesis factor 19 EMBV3_40826 GGCTGGCGGGGCTGGGTCCTTTAATGCCAGAAACCAGAAAGCAAACCTTTGAGAACAACT Gene GeneID:100296784|LOC100296784:XM_002691137:145_cdna Constitutive 0 NULL GeneID:100296784 11 GENE LOC100296784 NULL similar to cardiac ankyrin repeat protein EMBV3_35332 GCAATTGAAAGTGCCAATGAACTGGCTGTGCAGAAAGCGAAGGCAGAAATCACCAGGCTT Gene GeneID:508660|DDX46:XM_002689191:57_cdna UTR3_Alt 2 NULL GeneID:508660 7 GENE DDX46 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 EMBV3_38124 GTATATTAGAATGAATTTGTGAAGGCGATAATTATAGGAAAAACGTCTTTTGAGGCACTG Gene GeneID:510277|ZNF800:XM_002686933:43_cdna Constitutive 0 NULL GeneID:510277 4 GENE ZNF800 NULL zinc finger protein 800 EMBV3_34064 CAACACCATCATCCGGGACTTTTACAACCCCTTGGTGCCCGAGGCTCAGAAGCGCGAGAT Gene GeneID:404153|CLDN3:NM_205801:65_cdna Constitutive 0 NULL GeneID:404153 25 GENE CLDN3 NULL claudin 3 EMBV3_35882 GAACGAGTTCACGGTCATCAGGAAGAAGTTCCGCTGCCCCTACTGCAGCTTCTCGGCCAT Gene GeneID:507985|ZBTB46:XM_002692401:340_cdna Constitutive 0 NULL GeneID:507985 13 GENE ZBTB46 NULL zinc finger and BTB domain containing 46 EMBV3_04702 TTAACACCCTCTTCCCCAGCACAGGGCTTTCCCTCTGCTGAGTCACTGAATGATCCGAAT Gene BVT0102_183052 + 0 NULL GK000023.2:27539471-27550616 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16723 CTCTCACCTGTTATGAAGGGGAAAATAATGATCCTTTCTCTGATTTTCCATAATGTACAC Gene BVT0102_144267 + 0 NULL GK000014.2:50611911-50844178 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14502 CCCTTTGAACAAAGTATGTGCATAACCAGTCCATGAGATGAAACAACACCGTGCATGTTG Gene GeneID:507005|UBA2:NM_001083381:553_cdna Constitutive 0 NULL GeneID:507005 18 GENE UBA2 MGC142623 SAE2 ubiquitin-like modifier activating enzyme 2 EMBV3_25269 GCGGGGGTGGTGGTGTCGTCTTTGGCTTTCTCACATCCTTCCCACGAGCTGTAGGTCTCT Gene BVV0102_385107 + 0 NULL GK000011.2:2651938-2653389 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41060 CTAGCGAGCGAGCGGGCGGAGGCGCCGGCGCCAGTTTGAGCCAATAGTTTCTCTTCCCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00601 TCTTTCTCCTTGTGCCCTCTTAGGAACCACCCAAGACTAGCCCCAAGTTCGGTGACAGCT Gene GeneID:516327|ZNF740:NM_001103252:9_cdna Constitutive 0 NULL GeneID:516327 5 GENE ZNF740 MGC179392 zinc finger protein 740 EMBV3_40722 GCAGCTGAGTGTGCCAAGAAGGATGCAGCTAAGAGGGAACAGGAGCTGCTAAGAGAGAAA Gene GeneID:781675|LOC781675:XM_002707859:15_cdna Constitutive 0 NULL GeneID:781675 3 GENE LOC781675 NULL similar to guanylate binding protein 4 EMBV3_30641 GGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGACTTACCAG Spike ESK0101 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28480 CACTGCATGGACATTGGACTGAATCGCACCCCCAGGCTTTCTGTCCTGGAGCTTCTGGAT Gene BVV0102_322100 + 0 NULL GK000008.2:108839912-109317883 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229063 TCONS_00229067 TCONS_00229068 TCONS_00229066 TCONS_00229069 TCONS_00229065 TCONS_00229070 TCONS_00229064 1 XLOC_138648 NonCoding TCONS_00229066 XLOC_138648 NonCoding NonCoding - 8:109094756-109164674 - TSS170621 2517 1 TCONS_00229066_2 125 0.270162892332141 2 0.964028776978417 1.52892827751441e-147 0.000107167090430371 0.000472581911070819 5.52701865236013e-05 2.82303547143962e-05 2.61057066777542e-05 2.02761160370049e-05 1.91320766056189e-05 0.000541568460481064 0 9.18586343341275e-05 0 8.20644438146596e-05 7.47554082884847e-06 2.94104800103945e-05 0 0 0 6.50688042599614e-05 6.42318578917084e-05 0 0 0 0 0.000539360253856999 0.000142191445832949 0.000171694020934148 7.63224710408234e-06 3.85745406670266e-06 4.7773103259044e-06 XR_231535.1 LOC101909510 PREDICTED: Bos taurus uncharacterized LOC101909510 (LOC101909510), 5e-10 71.6 95.45 0.0170838299562972 0 noncoding 0 0 0 0 -0.197254339509725 0.13609099260085 -0.00422970323558898 0.928828271373186 TTCAGGGGAGGTTGTGAGGAGACTAGATAAAGTTCCCGTCGAAGATGGCGACGTAAGAGGGGCCTGAAAGGCACGACCTCCCACAGACACACCGAATGCACAGCTACACAGGGAACAACGTCCTCTGAAAAAAACCTGAAAACAGTCTGACTTCTGCACAACCAGCAAAAGAGAGAAAGCCCGCATTAAGGCAGGTGGGTGAGACCTGGCTACACCAGTCACTTGAAAGCGGTGAACCTCACCCCTACGTGGATTCCACCACCTGAGGGAAACTCAAAAGCTGGAGCTTCTCCCCGAGGAGGGTTTGAAGTCCACGTGGGGCACCCCAGCTTTTAAGACCTGCGCCTGAGAGACAAGCCCCCAAAACATCCAGTGAGGAAGAGTAACAGGGCCCACGGCCATGCAACCCACGGGGCTATTCGCAGTCTATGGTGTGGTTCAGAGTTTCATTCAGACTTACCTGCCTCAGGACCAGCGCCAAGCGGCGGATGGACTTTGTGGGAGAGGCTCATTTGCTGGTCTTGGAGCATCGAACTGGAGGACAGGTTCTGATTTGACAGACATTTGGAGGCAGGCGGAAGTGTTCTGTGGGTCGAACACTGGCAGGCACCATCTTTATGCTCGTGTGGTACTCTGGCGGCTGGACGCCATCTTAATGGTGGACGGTGGACTCCAGCCAGATGCTCTAGCTCCCACCACGGTCCTCCTTCTGCAGTGTGCTCCTCCGCCAAAGCTTCTGCATGCAGCGGGGTGGGGTTACCAGCAACTGCTGCCCTGAGACTCCTGAATATCTCTTGGCTCTGATGACTACGGGGCTTCCATGCTTGGGTCCCACAGGACGGTCACTCACAGTGAAAGAGTTATTAAATGGACGGCTGCCACCTCCAGGGCACGGCCAGAGGGCCACAGGCCCTGTGTTTAGGCTTTCTGTGACAGTGGCCTATTAGCTAATCCACTGAGCTTCATGCCTGAAGGGCAGGCTTCTAATTAAACACACATCTCAGGGCTGAGTTTCACCCTGTCTGAAGACCTTGGAGGATGGGCGCTGTCTCCAGAGCGCCAGGACCTCCCAACGGGGAGCATTTGTAAAAGCCTGGTGCCGTGGTCTCTGTGACAGCTGCTCAGGGGACACACCTTGATGGCCTGGCTCTGGTGGCCTGGAGGGCTGGATCCCTGGCAGGTGGCCACCCTGGGGCACTGCATGGACATTGGACTGAATCGCACCCCCAGGCTTTCTGTCCTGGAGCTTCTGGATGTGGGGCGGGCTTCCACACACCTAGAGGCCACCTGATAAGAACACAAAGCAGAGGAGCAGCTCAGTAATCAGCTGGTGCCGAGTTGATCCTCGGGAGAAGCTGCAGCTCGCTGGCCTGAGAAAGAGCGATTCTTACCTTCCTTTTTGTTTACCTGCAAGATCAAAAACTTCCCGTTAGAGGTTGACCACAGCTGGGTTGACCAGATGAATAGTGATCCCAGGGTGGAAGGGTCTGATTTATCCTTAATTTATCTGCAAGACCTTTCTCAGCCAGAACCTGGAGCAATCTCAGGTGACCTTCTGAAGCAGCCCTTCTTGGTGCTATCGATGGCCCTTTAATGGTCCAATTCAATACATTTTCCTCAGTCCTCACCCTGACTTGAATCTCTGAAGCATTTCTCACTGTTGAGCTGCCGCCGCCCCCTGCCCCTTATTTTTTGGAATTCTGTCCTCTCCCATCTTAGCACAAGAATGTTTGATTATGACCCTGTTTTTATCTTCTGGACCTTTATATATGTGTTTTTCCGCCCAAGTTCCTCCTCCTTTTATTGGGGTACAGTATTTAAACAAAATATTTATAGTTTAAAAAGTAAAATAATTCAAGTTTTAAAAAGAAGTTCTCCACTGCACTTCTTCCCAGAGTTAGCTTCTTTCAACTTTCTTTCATGATTTCTTCAAATATTTATCTCTATCCTAGGACACGAGGGCATGCTGTTTCATTTGTTTATAAAAATGTTTAGCTGACTTGAAGTCATACTCTGAAAGACTTTGGTATTCTAACATGATCTGCCAGTTAAAGTTATTTTGTCCATTGTTCTAATATATTTAGATCAATTTCATATTTATAGTTCGGATTATTATGATAATATAAATATTGTTCACGGCTGAAGTACATAGCACGCTAGGATTGTGTGTTTGTGTTCTCTGTGTGTGTATGCACATATATAAAACTTTTCCTGAAATTAAAATGAAATCTTTTTTTTTTTTTGCTTTGGTTACTTTTCTGTGTTTTTATCACTAATTCAGTCTCAACCATTTTTCTCAATGTACTGAACTACATCAGATAACGCTAGTGTATTGGTTCCTTTTCCTTTCCCTTGTCTCACAGCCATGACCTTGCAGCCATTCAGCTCCTCTAATCCGCACTACTGGTCCGGAAGCTGCTCGCAGCTTTTGACCTAGGACACCCCTCAGTCGTTACACTGGCACTTGCTTTCCCCTCATGTTGGATTGCCAATTTCTTGCCTATGCGTTCCTCAAAC TCONS_00226623 TCONS_00226624 r 3' 254846 TCONS_00226623 TCONS_00226624 r 3' 256067 EMBV3_39446 ACTGAGGTCCCTGCTGCTGTTGGGCCCAGCTCCTCGTGCGAGTGAATAAAAGTTTTTGTA Gene GeneID:789590|ZXDC:XM_002697153:94_cdna UTR3_Alt 2 NULL GeneID:789590 22 GENE ZXDC NULL ZXD family zinc finger C EMBV3_18658 AGCATTTTAAATGTAGTTTGAATATTTTCCACAGGATGCTACAATGTGAGTTATCACTTC Gene GeneID:539761|PLAGL1:NM_001103289:8_cdna Constitutive 1 NULL GeneID:539761 9 GENE PLAGL1 MGC160033 ZAC1 pleiomorphic adenoma gene-like 1 EMBV3_23150 CTCCTCACAGCTTGACCAGAAACTGGAACTTCACCCATGGCAGTGAAAGAATAGAGTCCT Gene BVV0102_330280 + 0 NULL GK000019.2:5290260-5316761 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17643 CTTGGGTGAATTTTTCATTTGAATCATGCAGCTTAGTCACCCTGTGGCGAAGGCCAGGGC Gene BVT0102_080094 + 0 NULL GK000019.2:18023501-18027327 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092461 TCONS_00095369 TCONS_00095370 2 XLOC_056903 XLOC_057706 Coding TCONS_00095369 XLOC_057706 Coding Coding CDK5R1 19:17997601-18028444 o TSS71133 3247 1 TCONS_00095369_1 307 0.06282722513089 4 0.894851176966474 0.00146101209847452 0.00153258467045287 0.00134655270224842 0.000668497749888258 0.0025520336410095 0.000268913885752796 0.00058495201336056 0.000762850054989281 0.000563855770770349 0.000104040463385364 4.86307049001121e-07 0.0002005906739784 0.000203073156271963 4.62200597619629e-10 4.0643080088453e-05 2.76593194121448e-12 0.000102581458811826 7.80930242147218e-07 0.000119438480611258 3.96440889932612e-07 2.19460571263748e-09 7.615933212864e-16 1.00356546328105e-19 2.04956185839106e-20 2.44783024618755e-08 1.31079377030575e-08 0.000478746354248884 1.7880560068502e-13 2.39636533626027e-09 8.60982476636251e-05 NM_174512.3 CDK5R1 Bos taurus cyclin-dependent kinase 5, regulatory subunit 1 (p35) (CDK5R1), mRNA. 0.0 1981 99.37 0.343701878657222 NM_003885.2 CDK5R1 Homo sapiens cyclin-dependent kinase 5, regulatory subunit 1 (p35) (CDK5R1), mRNA. 0.0 2495 80.32 0.841084077610102 TCONS_00095369_1 sp|Q28199|CD5R1_BOVIN CD5R1_BOVIN Cyclin-dependent kinase 5 activator 1; 0.0 634 100.00 0.996742671009772 1 coding 0 0 0 0 -0.218943442121109 0.160599670497604 -0.0607410563379065 0.396621081959003 GGCAGGCTGGGCGCGCAAGGGCGCGGGTCCCCGCCCGGCGCGCAGCGGCACCATGGGCACGGTGCTGTCCCTGTCCCCCAGCTACCGGAAGGCCACGCTGTTTGAGGATGGCGCGGCCACGGTGGGCCACTACACGGCCGTGCAGAACAGCAAGAACGCCAAGGACAAGAACCTGAAGCGGCACTCCATCATCTCCGTGCTGCCGTGGAAGAGGATCGTGGCCGTGTCGGCCAAGAAGAAGAACTCCAAGAAGGTGCAGCCCAACAGCAGCTATCAGAACAACATCACGCACCTCAACAATGAGAACCTGAAGAAGTCGCTGTCGTGCGCCAACCTGTCCACGTTCGCCCAGCCCCCGCCGGCCCAGCCGCCCGCCCCCCCTGCCAGCCAGCTCTCGGGTTCGCAGACCGGGGTCTCCTCGTCCGTCAAGAAGGCCCCGCACCCTGCCGTCAGCTCCGCAGGGACGCCCAAACGGGTCATCGTCCAGGCGTCCACCAGCGAGCTGCTGCGCTGCCTGGGCGAGTTCCTCTGTCGCCGGTGCTACCGCCTGAAGCACCTGTCCCCCACGGACCCTGTGCTCTGGCTGCGCAGCGTGGACCGCTCGCTGCTGCTGCAGGGCTGGCAGGACCAGGGCTTCATCACGCCGGCCAACGTGGTCTTCCTCTACATGCTCTGCCGGGATGTCATCTCCTCCGAGGTGGGTTCCGACCACGAGCTCCAGGCGGTCCTGCTGACCTGCCTGTACCTCTCCTACTCCTACATGGGCAACGAGATCTCCTACCCGCTCAAGCCCTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGCTGTCTCTCCGTCATCAACCTCATGAGCTCCAAGATGCTGCAGATCAACGCCGACCCCCACTACTTCACGCAGGTGTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCTCCTCGGGCTGGACCGGTGAGCCCGCCAGCCTGCATCATGGCTCAAGGATTCAATTCATTTTTAAAAATTTATTCTTAAATCAGATTTTGTGTACAGTATGTGTTTAGCAAAGCCACCAAGGGCCTCTCCCTTCCCACCTCCCCTCCTTGGGGTTTTCCTCCACCCTGCCAAGAACTCTGGGCGCTTCTGAACTCCTGAACCTTGTGCAGCATTCAGAAGATGTATTCAGAGCCACCCTGGCCCCCAACATCTCACTCTGGGGAATTGAAAGGACTGACTGGCCTCTGCTGCCTGCGCCCTTGCTGGACCAAGGCAGGGAAGGCGGCCCACAGCCAGGCAGCCCAGGGAGGAACTGGAGTTTCTGGTTGGAGGCCCTTTGCTGGCTCCTGTTCTGGGTCGTCTGTTCTCCCAGAGGCTCCTGAAGCCGGCCACCTGGACTGCGCCGCACGTGGGCTTAGGAGGCCAAACGCCCGTGGCCCTGGGACAGCCTCTTCAATCGAGGGGAAGCCGGCCTGGTGCGAAGATCATGTCCTCTAATTTGGCCATGCACGACCCTGGTTTGCTCTTTTTTCTTTTTTAGGGAGAAGGGCTTTCCTTTCATGGAGACATGGAACCGCCCCCACCCCCCAACAACCTCCCCTCCTTCGTCCCCCACCCCCAGCCCTGTTGGTAGTGTTGGTTAATGAGCTGGTTTGATTCACTAAGTTCTTTCATTTTGGGTCCCGGCTCCCAAGGGGTGGGGTGATGCCAGGGACAACTCCTTTCTTGGGTGAATTTTTCATTTGAATCATGCAGCTTAGTCACCCTGTGGCGAAGGCCAGGGCAGCTGCAGGTGCCCATTGTCAACAGCCTGCCTCCCGGGCAGGTGGGGCTGCCATGCCTGGGACTGAGCCAGTGCCCATGACATTTGCCCTGTGGAGCTGCAGGGATTGGGGCGGGGGTGATGTCAGGGACCAGGGTGATGTGGTAATGATGCGCCCCTCCCCTCACCCCCTGTTGATGTAAAGCTGTTTCCAAACAGTTGAGTCTCTTCTGAAGACGAAGCCTTGTCCCGAAAGGCCCAGGGAGACGGCTGGATCTTGGAGACAATTATGAGCCGGGAGCCGAACTCCTGACTGCCTGCTGATTCTCCCGCTGATCATTTGCAGCTGCTGGTTTGGGTCTCCACCTTCAACCTCAGTGGCTGTAAAAAAAAAAAAAAAAAACCCATGATGTGTCACTTAATTTTCTTTCTGATTCTCCCAGATCGGTGGCTGGGGGCTTGGGAGAGGACCCAGAGAAGGGAGCCAGCCTTCCGTGATCCCTCTGGCTTTGGGGAACAAAGACTGATGTGAAGGCCCACAGAGAATTCTCTCTTCCAGTCTCAAACCCCAAGGGGAGCTGGAAGGGGAGGCTGGGGGTGAGGGAGGCAGGGGGCCGTTTTACATAGGATTAGCTTCCAGGTGGCTGCCATTTCAGCACAAGCACTACTGAAATTCACATAAAAAAGAGAAAGCTGTGAAACTGAGCTCCCGATTTAACAGGCCCGGCGTCGAGCCTGCGGCCCCGTGGTGCTCGCGAGAACGAGGGCCTGCCCCAAGCTTGGGAGCACGGGCCTCAGCTGCGCCCTGAGGCCCACGCCCAGCCGCTCCCAGGACCGCCGGCCAGATTTACCTGCCGCGGGGCTGGAAGGAACCCGCGGCTGCCGGCGGGGACCTCGCGTGCAGAGCCTCTCCTCCGCGGGAGTTGTCACACAGCCTGTCTGTGCAGATTCTGCTGCCGTGTGTGACCCGAGGAGTTTTATAGCATCATCCCACTACTGGACATATATCTGGAAAACACCATAATTAAAAAACATACATGTACCTCGGCTCACTGCAGCACTGTTCGCACGGAAGCAAACTGAATTTCCATTGAGAGACGAATGGATAAATAAGATGTGGTACACATATGCCGTGGAATGTGACTCAGCCATGAAAAAGAATGAAATGACGCCACTCGCAGCAATGTGGATGGATGCAGAGATTATCATATCATGAAATGTGGGAATGATAGTGAAGGTGTGTGATGGAAGCAAGATAGTACTGGAGTGCCACTGACTCACGACCCTGGGAAAAGCTCATGAAACTGTAACCTGAGGGCAGAAATTGGCCTTAATCACCTTGGCAACTGCTGAGCCCACCATGGACTCGCCACACCCCAGACAAGGGTGATGCCCCAGCCACTGGCACATGGCATATCTGCAGAGAAGGCTTCCCAAGACCAGCCTCCTGTGTCTGACAGGGACCAGGCCCAGAAACATCCGGGAAGC TCONS_00092451 r 3' 152 TCONS_00095371 s 5' 0 EMBV3_18914 GTGGTATATTAGTTCAGTTGCCACTGCCAGGTGATGCAACTGTGACAATAGCTCACAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08957 ACTTGGACTGGGAGCGGGGCCGCGTGGCCTTCTACGACGGCCGCTCCCTCGACTTGCTTT Gene GeneID:504845|LOC504845:XR_084046:352_cdna Constitutive 0 NULL GeneID:504845 23 PSEUDO LOC504845 NULL similar to HZFW1 EMBV3_05377 AGGCTCGGGGTTGACTTGGTCAGGCGTAGAGCTTTTTTAGCCCTGTGTCATCCTTGATGC Gene BVT0102_050472 - 0 NULL GK000022.2:15312568-15327001 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41544 TTGTACCACCTTCTTCAGCCCTGATGTGAATTCTCGCTCGGCCCGCGTGCTCTTCCTCCT Gene GeneID:533907|SLC41A1:XM_002693866:124_cdna Constitutive 0 NULL GeneID:533907 16 GENE SLC41A1 NULL solute carrier family 41, member 1 EMBV3_13739 AAACCTGTAGTCAACAAAATGCCACCTTCTGCAGCCAACCTGCCACTGAGATTTGGGAGG Gene GeneID:281451|NPVF:NM_174168:112_cdna Constitutive 0 NULL GeneID:281451 4 GENE NPVF RFRP neuropeptide VF precursor EMBV3_15308 CAATGGCTAACTAAGGAATTGGGGATCTGGGGAATATCCAGGAGTCTAGAGGCCACAGAG Gene BVT0102_042620 - 0 NULL GK000025.2:22729543-22780973 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03220 GGCAGACGGTGGTGTCTTCCGGGTGGACAGAAATGGACTCAGAAATCAAGGAAGAAATTC Variant GeneID:534992|C2orf43:NM_001079608:174_cdna 58^228 1 EMBV3_26997 GeneID:534992 11 GENE C2orf43 NULL hypothetical protein LOC534992 EMBV3_30837 GGATTTTCTATGCGGGAGCCACTTTTTTATAGGGATGTGTTGGGGGTTTTCAGGGAGCCC Gene GeneID:789613|SMARCD2:XM_002696066:395_cdna Constitutive 0 NULL GeneID:789613 19 GENE SMARCD2 NULL SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 EMBV3_23908 CTTCTGATTGAATGCTTCAGTTAAGGAGAATGGCCTCTATTTCTGACACTGAACTTTTCC Gene GeneID:280956|VIP:NM_173970:2_cdna UTR3_Alt 2 NULL GeneID:280956 9 GENE VIP MGC143128 vasoactive intestinal peptide EMBV3_38256 ACAACTAAATTTGGAATAGTGACGTAGGGCCAGCTCCAGCCGCTTCCGGATGCCCTAATA Gene BVT0101_016116 + 0 NULL GK000007.2:13545436-13548050 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30101 GGCCCCGATTCTTTTGCTTGTGCTGCCAGAGACTTCTGGGAAAGATCCTGATGACTATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14740 ACGACGTGGAAATGGTCGGCCAGCTCGTAGGCATCATGGTGGTGTCGTGTATCTGCTGGA Gene GeneID:507437|PTGER1:XM_002688749:99_cdna Constitutive 0 NULL GeneID:507437 7 GENE PTGER1 EP1 prostaglandin E receptor 1 (subtype EP1), 42kDa EMBV3_04413 TTATCAGCAACCTTTATGCTCAATTTTTATATAACAATTAACTGTTAAATGTCAATTTTA Gene GeneID:783110|LYRM5:NM_001114860:52_cdna Constitutive 1 NULL GeneID:783110 5 GENE LYRM5 MGC140631 LYR motif containing 5 EMBV3_15368 TTCATGATGGGAGCGTCCATGAAAGACTGGGACAAAGAAAGCGATGGACCAGATGGCAGC Gene GeneID:505387|RRP15:NM_001040506:2_cdna Constitutive 0 NULL GeneID:505387 16 GENE RRP15 MGC128046 ribosomal RNA processing 15 homolog (S. cerevisiae) EMBV3_08502 AGACAAGAACTGTCTCCCTGAAGTCTGAGTGTGTTGAATCGCTGACCTCAGGCTCCGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00759 TTTCTCAAAAACCTTCACATCTTGGTCAAGGCAATTATTTGGCAGAAAACTAGAGTATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13912 AAATGGTCGCTTTCCCCTAGTCTAGACACGCTTTAAACAGCAGTCGTAAAAGTCAGTCTT Variant GeneID:537349|DZIP3:NM_001076092:101_cdna 157^234 4 EMBV3_17682 GeneID:537349 1 GENE DZIP3 MGC137859 DAZ interacting protein 3, zinc finger EMBV3_03409 TTGGTTCCAAAACCGAAGAGCCAGACTCCGTGTCCAGAGAAAAAGAGGCCTTGAAGAAGC Gene GeneID:100297492|LOC100297492:XM_002695483:221_cdna Constitutive 1 NULL GeneID:100297492 18 GENE LOC100297492 NULL similar to double homeobox, 1 EMBV3_21964 TCTCATTTGGGTTCCCACGCGGCCCCGACAGGAGAGGAAAAATGTGCAGACCATGAGAAA Gene GeneID:100297019|LOC100297019:XR_084614:845_cdna Constitutive 0 NULL GeneID:100297019 18 PSEUDO LOC100297019 NULL hypothetical LOC100297019 EMBV3_17146 CAGAGTCCCTGACCTTCAAGTGGCCTTTTCTGGGGCCTCGACAATGCATCGCCTCAGAGA Gene GeneID:100336971|LOC100336971:XM_002694000:299_cdna Constitutive 0 NULL GeneID:100336971 16 GENE LOC100336971 NULL left-right determination, factor B preproprotein-like EMBV3_26287 CACTGTGATTGGCGCCCGAGTCCGCTGATGGAAGAACGTCCTTGGTCCAACAGTGTTGCT Variant GeneID:539152|SUPT7L:NM_001076150:192_cdna 240^340 1 EMBV3_05624 GeneID:539152 11 GENE SUPT7L NULL suppressor of Ty 7 (S. cerevisiae)-like EMBV3_14637 GTTCTCTTCAAAGGGTATGTCTTGTTCAACAGTTGGCAATTTCATTGCCCTCATTGGCCC Gene BVV0102_347911 + 0 NULL GK000026.2:39221080-39292548 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152332 TCONS_00152331 TCONS_00152333 TCONS_00152329 TCONS_00152330 1 XLOC_092313 Coding TCONS_00152330 XLOC_092313 Coding Coding C26H10orf46 26:39286313-39343520 j TSS113634 7135 1 TCONS_00152330_1 246 0.167063770147162 9 0.875432646925148 0.00121503838922523 0.000898219015993851 0.00107924739651072 0.000729784333004024 0.000383717452658235 0.00041689597672676 0.000238778511871027 0.00125343095700884 0.00119294163619768 0.000421502350134602 0.000296155996209575 0.000178871960990823 0.000330905397930843 0.000711205327403027 0.000577760124713193 0.00651967520673307 0.00328398658477112 0.00313833362356921 0.000566788672153215 0.00101399743284448 0.000254427384244712 0.00173968949242747 0.00184728917467099 0.00188883773160064 0.000784342162682985 0.000764565212891382 0.000544355212956368 0.000620082634971018 0.000326063204865702 0.000517420016456575 XM_002698541.3 CACUL1 PREDICTED: Bos taurus CDK2-associated, cullin domain 1 (CACUL1), 0.0 1.026e+04 100.00 0.797196916608269 NM_153810.4 CACUL1 Homo sapiens CDK2-associated, cullin domain 1 (CACUL1), mRNA. 0.0 2901 80.73 0.447091800981079 TCONS_00152330_1 sp|Q86Y37|CACL1_HUMAN CACL1_HUMAN CDK2-associated and cullin domain-containing protein 1; 0.0 506 98.37 0.995934959349594 1 coding 0 0 0 0 -0.113848799610546 0.461834504999656 -0.0556760189669886 0.332929403132178 CTTGGGTCATTGTGATTCCTTCTTTAGTAATGAATGTTATAACTATTGAAGATTATAAGAGCACATACTGGCCAAAATTGGATGGTGCCATAGATCAGCTTTTAACTCAGAGTCCTGGTGACTATATCCCCATATCCTATGAACAGATATACAGTTGTGTGTATAAATGCGTGTGCCAGCAGCACTCGGAGCAGATGTACAGTGATCTGATTAAAAAGATAACTAACCACTTAGAACGAGTCTCAAAGGAGCTGCAGGCCAGCCCTCCAGACCTCTATATTGAAAGATTTAATATAGCTCTTGGACAATATATGGGAGCATTGCAGAGCATTGTGCCTCTTTTCATATATATGAATAAGTTTTACATCGAAACCAAGCTTAACAGAGACTTAAAAGATGACCTTATAAAGCTGTTTACCGAACATGTTGCAGAAAAGCACATTTACAGCCTAATGCCTTTACTTTTAGAAGCCCAGTCAACACCATTTCAGGTCACACCTTCAACTATGGCAAATATTGTGAAAGGCCTGTATACTCTCAGACCAGAGTGGGTTCAGATGGCTCCGACTCTGTTTTCTAAATTTATTCCAAACATTCTTCCTCGTGCGGTGGAGTCTGAACTGTCTGAATATGCTGCTCAAGATCAGAAGCTTCAAAGAGAACTTATACAGAATGGTTTCATGAGAGGTGACCAGTCCCGGAAGAGAGCTGGGGATGAGTTGACTTATAACAGCTCATCAGCCTGTGCAAGTTCCAGAGGGTACAGATAGTGAATGTATTGAATGTACTTTACTTCCTGAAAAGAGGACACTGGAGCTGCAGAGACTGTGTTCAGAGCACAGCGGGGGTCCCGCAGACACTCAGGAGCCGTGTCACCAAGCTGTTCTTGGAAGAGGATGCTGGACTTCTTGCTTTGGTTTGTAATTTAAAAAAAAAAACAAAACAAAACTAACAAAAACAAAACAGTTGCTGCTAGACTTGGGGATGGTTTTGAAATGGGACAATCTTTTAACGAGTTTATCTACAGATTCCGTGAGGAACACACATCATGAAGAGTGACCATTGCTAAGTGAGATCCGGCAGCCAAAATCAGCAGCTTCCTCCAAAAAATATAAGAGCAGAAGGATTTTTTTAAAGCACTTGTTTTGTTCATTTGTGGACTTAGCACTTTGGCAGATTGGATTCACACATCAAGATGTCTTTTGCTTTAAAATCAAGCAGATCATTACAAAATACAGTATTTTTCACCCGTAACCAAAACGACCCCCTTTAAAAACAAAAAAAGAGTTGGTCTTTGTTTAGCATTAGAAAGTCTCGTTACAGGAAAATGCTAACTCTGCTTTCAATATAACTTCTCCCCTCCCCCCACCCCCATCAGTTCATAACTCTTTTCTACTCTGTGCCTTGAGCTTTGTGCACTTTGCAGCTCTGTGACCATGTTGTCAAACTCACAAATGCTTCCCGAAAAAGCTGATAGCATTACAGTCTGACCGCCAAGATGTCGGGTATGACCTCATAGCAGGAGGCTGAAATCAGTGGGGAAAGAGGGACATGCTGCACACGGGTCAGATTTCCCCCTGCCTCGCAGTGGTGTTTTCTTGTTAAATGTTGGGGACCAACTCTTTAGAACATTTCCATTCCTCTGTCATTTAACAGGCTCTCCCCAGCTGCTGTAGTGTTGGAATTATGCTAGTTTAGGGTTGGGCAGTACTTTAGCACTAAAGCTACCTTTTTAATACTGTTGAGAATTGCCCAGTGGTCAAAGCTGGTTTCTGTGATGCTCTAGGAAGCAGATACGGTTATTAAATCCAAACATAATCAATAGTGTGGTTTTCCTGATCAGTCTCATTTTAAATGGGTGAGATAAGTACTTAAAAAAGTCTGCAGTCTATATCTTTTAAAAGATATTCAAGTGTCATAGAGAAGAAGTAGCACTGCTGTTTTAAGGCTCCCTTCTGGCTCTGGCCAAGCTAGATTTTCTGTTTCCATACACTCACAGTGCTCTTTAGTTCCTTAGTGCTCTTTAGTCCTATAAAAGACTCTGAAGCTTACCCTATTGATTTTGAAAGGCAAAGGAAAATAGATGCAACAAGGGAAAAATGATTTTCTTCTCAGTTTTGCTTAAATCTAAATCGAGCATATGCTTGACTCTTTTTGGCTTTGTTGGCTGTGTCAGACTAATTTGTCTCTTCAGAGGACTAGAGGCAAAAAAAGAAGACATACCAGGGATACTGACTGTCACACTTGCGATTTCCAGGTTGTTCATAGAATTGCCTCTGCCGGTTCACTTGGTGCTTTTGCAGAGAGCAGGCTCGGGGTGAGTTCGAAGTGGAGTGTTAGGAGCAAGTCAAGTCATTGCATAGAAATCCTCTTATTTGTAAAATTAGTATTCAGAGAAGCAAAAGTTAAAGGTTGTCAGATTTATTTTTTTAAGTACTTATCAACCAGAGTTGGTAGATTTTGAGGAGGACTTTCACATGTGCTCCTTTAATGCCGTGAGCATCTTGGATTGTATTGATAAACACTGAATTACTGTTAAGACTATTAACAGGCCCTCATTGTGCCCTGTACGATTTGATTTGCCACATCATAACATTCTAATGTCAAGGAAGAATTCTCTTTTATCATGAAGTTCAAATTTTATTTTACTCAGTGGAATGCTTGCTGCAGGCTTATAACACCTGCAACCAAATTCTCTCAAGTAGTTTTAATAATAATATTTCTGAAAAGGAATGAAGTTGGAATGTTTCATTAAATGTGGATGAACTCTTCATTATCCTAGTAATGTACCCAAATGCTTTTTCTGGGAAGGAAGTATTCTTCGGCCAACAATGGAACCTTCCCTATAAAAGCATCACATTAGGATATGAATTGGCATTAAAATCTTTGGATGCTTTTTGCATTGTTTAGTTAATGGGGGAATATTTTGTATTGTCTTCTTTTTATTATTATGTGTGTGTTAACAAAGTGGGCAGAGTAAAGTTTGCAGAATTTAGTCTCTCTGTAAATTTTTGCACAGTGGCTGCAGCTCGCTATGGGTGAGGGCTTAGTGGTGCAAAGCTTTGATTGGAAGGCACTGGAGGAACACCTCCCAGTACATTCAGCCTGGTTCTTACTCATCTTAGCCTTGTGAGGTATACTGCAGTATGAAGAATTTATTTCTTTAACTCAATAGTGACCTTGTTTATTTAATTGGGATTCTTAACAAAATTCTTAGTCTGCAGTGAAGAAGTAAGAAATGCCTCCATTTTGTGTTGACTAACACTGTCTGCCTAAAAGTATTTCCTTCACGTGTTCACTTGTGTTCTTGCCAGTACAGTATGTAGTTTACACACCATAGTTAAACACTGGCTTTTTATGGGGCCCAAATCATCAAAGGCAGAAAATTGTAAAGCAGGTTGATCGTCTCATGAGTCAACACAAGTAGTTGGTTTGCCAAATGGACTAGTGTATACATACATGCAGCCTGAAACTGGACCCTCCAGAGAAAGCCATTTCACTCACTTTGGAATGGTGACACTTAACATCAATAGATGATCGTTGTTTGGAGAGATGGTACTTATTTTAAAGCTGGCATTAGGCTTCAGTATGTGTTGTCTCATATCCTTCTCTAGTCACAGCTGCACCCTAACCTGACTGCTGTGCTTTCTGTGGGGCAGAGAGCAAAACCTGGTGTTGTGACTCTTCACATACTACGTCTTAGATAAGAGTTAGTGAAAAGAGACGAGACTAATACCTGGGCACATGAGTTGTGCGTTATTAAATTTTGTGGAGAAGTGACTTTTTTCCCTGTCCCTTTTATGAGTTGGAGGCGGTTCCCCTCCCCGCCTTCGGGGTGCGGGATGAAAGTCACCGTGTGAGTAAGTGAGCTTGCAGAAGAGTGGGCTGTGGCAGTAACGCTGCACGCACATGTATCCCAGTGCCACAGCCCGTGACACTGTCACGCCTCTTGCTGCACGCCATGCTTTCTGTCAGGTTGCAAATTTGCACACACAAAGAATTCCTCAGGAAGAGTTTGCACACGCATCACCTCGCTATAATATTCTGTACCGGCCAGACGAGGGGTTTGAAAGTTTTTCAGCACAAAAGGAGAACTTCAGAGTGGTGGTCTGTGCACACGTACAAACAAAGGTAATGGTGATCTCGCAAACACAGTTGGTTTCCGGAGCTAAGTGAGCAGGAGCGCTTGTGTCGTAGTATTGAAGAAGCTGTTTACTCTCCCAGGGTCACCCTTCAGATCTCGTCTTCTCACTGAGACTGGCTCTGTTTTCTTCTCTGTGTTTTTTATTGCAGTTTATTATTTCCATGATTATTACACAAGGCATTACCCTTGAGCTAAAATTCAATTTTCCAATAAGCAGCTAGAATTAGATAACATTGTTCTATGAATATACACTAATCTGGGTTATTAAAAAACTTCACAATTAAAAAACAAAATAGAACCCTTGCATTAGTTATCCAGTCATTGTTTGGATGTTTGGGTTTTTTTTTTTTTTTTTTTAATGGTATCTCATTGAGCTTCAGAGTATTACTTTGACTTTAATTCACTTTAGACCACTTAACGGGACTTTAAAATTTAAGATCAGAGTATGAATCCCTTGACATACACCCAGAAGAGATTTATAAGGACCTTTTTAGTTGTGATTACTCTTTTCAATAAGATTGCACAAGGTGAAATTTATGTTTATCAGAAGTTAAAACAGAGGTCATAGTTATTCATAGAGAAATGGCTTTCCTGTTATTTTCCTTACCAAGTTGAAATTTGTCCCAGTTTTTGGCCACCAGGATCTATGAAAGGACCTATGTTCTTTTCAAGGGAAATGATTCCTCTTCTATTCCCACTGTTGATTAAATAAATCATTGACACTTTCCCATGTCCACTGGCCAAGACCTCATTTCGAACCTCTTTCCAGAGCCAAGTGGTACACGTACCTATACTATTTCTGCTTATGTTGGTGGAGTGGCTGTGGGAGCATTAAAGAAAATGCTAATCAGAGGTACATTCTTATAGGACCGTAGGGTATATTGTACCCCTGCTGACTGGAAATTATCTTCATTTCTAGTTGGATTGCATTGTTCAGAAATGCAGTGTGTTATTGGCTTATAATTCTGGGAAATTGATAGTGTGGCTCCGAGGTGAATTCTGTGGTTTGAAAAAAATAAATATTTTGTATTCTCAGATGTCATTTCAATGTTGTGACTATGTACTAAATGCAATAAGACTATGGCTGTTCTCTTCAAAGGGTATGTCTTGTTCAACAGTTGGCAATTTCATTGCCCTCATTGGCCCTGTTTGTCAATATTACAGCCATGCAATTCAGGAGTTGTTGTTCAGATGTGATGTTGTGGGGAGCTATGACTGGAGACAGGAATGCTTGCGAGTAAATGGGAGGCCAAATGCAGACAAAACGCTTCTGCCACCCACCAGCATAGCCAGAGCAAGGGTGAAGCGGTGAGTCTAGTTCCTGGTGGTCCTTTTCTGTCAGAAAGCGTGGTGGGGCTTAGAACAGGGTGTTCTGTACATTAGCTCTTTTATGAATCCAAGAAGAACAAAATGGTCGATGAAGCTCTTATTGACTGGGGATTCAGAGCCACTGACTTTGGCTCTGACCTTTAACTCTTGCTGGATTTTGAATCACTCCTTCTGTATTAGGGTGTATACCATCACTCTAAAACATTGTGGTTAATGAAATAAATCTTGTACAGATGTCCTTGGCCTTGTTATGTTAATACCTGGTTTACTGGAAGTTTGTTTTAATACAGAATATATGGTTTTGCTTATAGTACATTCATGATGCTTCCTTTAAATGATAATGACACTCCGTATTCTACCACATTCATTAGCCTGCAGCATGAGTGGCCATCCTGACCTCTACAACCAATGTGAGTGTGTGTGTGTGTGATGATGGTGATCAGTGATGACCAAATTGGATTTATCTCAGGAATGCAAATTGGTTAATGTTAGGAAATCAATTAATGTGACAGACCCATCTATCAACAGATTAACATGTGATCAGATTGTCTGTGAAAATCCAAAATATCTACAAGGCAGATTAGTAGCCTTGTGAGTTTATCAGGGTTGCTAGAACACAATCCATATGCAAATTACCATATGCATTACCTTTAAATGCAGCAACCACAAGCAGTAATGTCTGTAAATTTTTAAAATATTGTTAAGAAATAGAATTTATACTAGGAACAGAAAAGTCATAAAGTACCTAAAAATCTTAATAAAAGATACATAAGCCTTTTAATGAGAAATTGAGAATTTTTAAAAAGCACCTTTGTTGACATAAATAGACAGTGGTTGGTAAGATCATCTCAGTCTCAACTCTTTCTCCGAATCTGTTAGTAGATAAAAGAAATTCCAACAAAAAATCCCAGCTGATCCTAATATCTAAATGGAAAAACAAAGGACCATGGATATCCAAGATACTTGTAAAAGAAGGTGAGGTGTGAGGAGAGCTAGGATTACCAGAGTATGACCCTTACTGTGAAATACAGTGAGTGCTTAAAACACTGTGGAGTTGGCACAGAGATGATAAGTAGATGAATGGACAGGAATAAAGAGCTCAGAAACTGACCCACTCATGTTCCAGAACCAAATTTTGTTAAAAGATAGTCACTGCAGATCAGTGAGGAGGAGGAGGACGGATTATTTCTTAAATGAGGCTTCAGTAATTTTTCAAAAAGGAAAAAAAGTGAATTGGACTTCAACCTTGCACCAGACACAAAAGTCAGTCCCAAGTGGATTAAAGATTTACTGGATTAAAGTTAAAACTGTAAAACTTATAAGATGGTATAGAAGAATATTTTTTATGACTTTAGGGGGAAGGGGAAAAGGTACAAACCATTAGTTAAGAGAGAAATAATTTGGCTGCACTAATAGTAACTACTTTTGTTTACCAAACATGCCACAGAATGAAAAAGTAAGGCCAAACTGGAACAAGATACAGATAATCATGATATATACATAATTGTTAAAAAGCACCTGAATGTATATCAGTAAGAAAGCAACAACTCAGGAGAGAATTGGGCAAAAAGCACAAGTAGGCATTTTACAGAAGAAAGAAATGGCCCATAGGCATGAAAAAATGTCCAGCCTTATCAGTAATCAGGAAACACACCTGAAACC EMBV3_21167 CGACATGTGGCGGTTAATGTTTTGTCTGGATGTAGAAGTTGAAGTCTAGGTGTAGTCAGC Gene BVT0102_009253 + 1 EMBV3_18563 GK000004.2:13529585-13544268 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12688 ATCCCTGGTGGGGGCTGCTTTCCAAGCCTGCTATACAAGTCCTCGATTTCCTGTTTCTGT Gene BVV0102_089499 + 0 NULL GK000019.2:43451726-43468380 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093954 TCONS_00093951 TCONS_00093952 TCONS_00093953 TCONS_00093949 TCONS_00093950 1 XLOC_057303 Coding TCONS_00093953 XLOC_057303 Coding Coding LOC100849076 19:43452811-43467562 j TSS70371 3942 2 TCONS_00093953_5 621 18 0.733966101694915 2.00653131976319e-07 3.99075309446004e-15 1.36806278381683e-07 3.15723540633578e-25 8.26393152692697e-25 4.79363159704676e-08 2.03860044745728e-08 7.30467698193404e-24 7.45175144348554e-11 6.09309945426719e-08 4.57315894793826e-10 4.56131365438883e-08 3.19242239423378e-08 2.01449891423836e-16 1.77420224263139e-08 0.00429624956105051 0.000224837205006795 3.39574629897707e-07 1.05045541376039e-07 1.01960127241383e-08 4.50045842935781e-08 1.06947629303962e-09 2.35119192411984e-08 0.000666905601942637 2.28599108008541e-10 1.05322829421393e-07 1.10944703925238e-30 0.000508396394413507 6.2713533096148e-05 0.00050971783782314 XM_003587441.2 WNK4 PREDICTED: Bos taurus WNK lysine deficient protein kinase 4 (WNK4), 0.0 3961 100.00 0.556823947234906 NM_032387.4 WNK4 Homo sapiens WNK lysine deficient protein kinase 4 (WNK4), mRNA. 0.0 2453 84.18 0.556823947234906 TCONS_00093953_3 sp|Q80UE6|WNK4_MOUSE WNK4_MOUSE Serine/threonine-protein kinase WNK4; 0.0 939 90.05 0.981450252951096 3 coding 0 0 1 1 -0.105657134153669 0.400254113085991 0.0133325537312089 0.771105797432644 ATGCTGGCACCCCCGGCCCCAGAGACCGAAGTCCCCATGTCCCAGGCGGAGGCTGACCTGCCCCTGCGGCCCCCGCCGACCCTTGCCGCGGCGGGGCCGCCCCGCCTCGGGCCCCCTTCCCGCCGGGTGCGCCGCTTCTCCGGGAAGGCTGAGCCCCGGCCGCGCTCTTCCCGTCTCAGCCGCCGCAGCTCAGTCGACTTGGGGCTACTGAGCTCTTGGTCCCAGCCAGCCTCACCCGTTCCGGAGCCCCCTGATCCGCCGGACTCCGCTGGTTCCGGCCCCGCGATGAGCCCACCGCCCAGCTCTGAAGAGCCCCTTGAGGGCATGTGGACCACGGGCGCCCCTGTGAAGCCTGCAGACTCCGAGCGTTTGGAGCCCGCCGGCTCCACAGGAGGGTCGGGGTCCCGGGAACAGCCGAGGATCACCGAGGCGGCGGCGGCCCGGGAGCGGCGGCGGGAGCAAGAGGAAAAAGAGGACACGGAGACCCAGGCTGTGGCAACGTCCCCGGACGGCCGATACCTCAAGTTTGACATCGAGATTGGACGTGGCTCGTTCAAGACGGTGTATCGAGGGCTGGACACCGACACCACGGTGGAGGTGGCCTGGTGTGAGCTGCAGACTCGGAAACTGTCTCGAGCCGAGCGGCAGCGATTCTCAGAGGAGGTGGAGATGCTCAAGGGGCTGCAGCACCCCAACATCGTCCGCTTCTACGACTCCTGGAAGTCGGTGCTGAGGGGCCAGGTTTGCATCGTGCTGGTCACCGAACTCATGACCTCGGGCACGCTCAAGACATACCTGAGGCGGTTCCGTGAGATGAAACCACGAGTCCTTCAGCGCTGGAGCCGCCAGATCCTGCGGGGGCTCCATTTCCTACACTCCCGAGTACCCCCTATCCTGCACCGAGACCTCAAGTGTGACAACGTCTTTATCACCGGCCCTTCGGGCTCCGTTAAGATCGGGGACCTGGGCCTGGCCACGCTCAAGCGCGCCTCCTTCGCCAAGAGCGTCATCGGGACCCCGGAGTTCATGGCCCCAGAGATGTACGAGGAAAAGTACGATGAGGCCGTGGACGTGTACGCGTTTGGCATGTGCATGCTGGAGATGGCGACCTCGGAGTACCCCTACTCAGAGTGCCAGAATGCCGCTCAAATCTACCGCAAGGTCACCTCGGGCACGAAACCCAACAGCTTCTACAAGGTGAAGATGCCCGAGGTAAAGGAGATCATTGAAGGCTGCATCCGCACGGATAAGAATGAGAGGTTCACCATCCACGACCTTCTGGCTCACGCCTTCTTCCGCGAGGAGCGCGGCGTGCACGTGGAGTTGGCGGAGGAGGACGACGGAGAGAAGCCGGACCTCAAGCTCTGGCTGCGCATGGAGGACGCGCGGCGAGGGGGGCGCCCACGGGACAACCAGGCCATCGAGTTCTTGTTCCAGTTGGGCCGGGACGCGGCAGAGGAGGTGGCTCAGGAGATGGTGGCCCTGGGCTTAGTGTGTGAAGCTGATTACCAGCCAGTGGCTCGTGCAGTGCGTGAACGGGTTGCTGCCATCCAGCGAAAGCGTGAGAAGCTGCGTAAAGCTAGGGAGTTGGAGGCCCTCCCCCCAGCGCCGAGACCCCCACCAGCAGCTGTCCCCATGACTCCTGGTCCCTCCAGTGCCTTCCCTCCTGAGCCCGAGGAGCCAGAGGCAGACCAGCACCAGCCCTTCCTCTTCCGCCATGCCAGCTATTCATCTACCACCTGCTTTTGCTCTATCCATTCCACGTTCTGGCCCCGGCAATGACTTTTCCCCTGGAGAGAGTTATGCCTCAGAGGCAGCATCAGGCCTTAGTGATGTGGGAGAAGGGATGGAACGGATGAGGAGACCCCCAGGGAAAAACCTCCGGCGTAGACCTCGATCCCGGCTTCGGGTCACAAGTGTCTCAGACCAGAATGACAGAGTGGTTGAATGCCAGCTGCAGACGCACAACAGCAAGATGGTGACCTTCCGATTTGATCTGGATGGGGACAGCCCAGAAGAGATCGCAGCTGCCATGGTGTACAATGAGTTCATTCTACCCTCGGAGCGAGCTGGATTCCTGAACCGGATTCGGGAGATTATCCAGCGAGTGGAGACCCTGTTGAAGAGAGATACTGGCCCTGTGGAGGCTGCTGAAGACCCTCTGAGTCCCCAGGAGGAGTCAGCACCACTGCCTGCTCTCCCGGGGTCCCCCCCAGACCCATCCAGGGCAGAGCTCCAGAGCAGCACCTCCCTGGAGCAAAGATGCTGGGCAGCTTTTTCCACCTCCACATCTTCTCCTGGAACCCCCTTGTCTCCTGGAAGCTCCTTTTCTCCTGGAACTCCTGTTTTCCCAAGTCCCATCCTTCCCATCACTTCTCCCCCATGTCATCTCAACCCCTCCTCATTCTCCCCAATTTCTCCTCAGGCCTCCTCAAATCTCTCTCCACACCCCCAAAGCTGTCCACTTCCACTCTCCCCCAGGGCACCCCAGTTTCCAGTCCCATCTGCTCAGTTTCCACAGAGTTCTCTCTTCCCCGATTGTTTCCAGGGCACTCCTGCTCCCTCCTTTCCCCTCTGCCCCTCTGCTTGTCCCCTCCCCTCCACCACCGCAGCCCCTCTCCTCTCTCTGGCTAGTGCCTTCTCTCTGGCTGTGATGACCGTGGCTCAGTCCCTGCTGTCCCCGTCCCCTGGGCTCCTGTCCCAGTCTCCTCCAGCTCCTCCTGGCCCTCTCCCTAGCCTGCCCCCTCCCACTCCCTGTACTCCTTGTGGCCAGGAGTGGCCTTCATCTCTGACAGCTGAGGTGGAGAGTGAGGCCTCTCCAAATCTTGGTCAGCCACTCCCGGGTGAAGCCAGATTGGCGCCCATCTCGAAAGAGGGAAAGCCTCAGCTTGTTGGGCGCTTCCAAGTGACTTCATCCAAGGAGCCAGCTGAGCCTCTTCCCCTGCAGCTGGCATCCCCAACTCCCTCTGGCTCCCTGAAGCCTCCAACCCCTCAGCTGACCTCGGAGAGCTCGGACACAGAGGACAGTGCTGGAGCCAGGCCAGAGGCCAGGGAGGCTCTGGCTGAAAGTGACCGTGCAGCCGAGGGCCTAGGGGCTGGAGCTGAAGAGGAAGGGGACGATGGGCAGGAACCCCAAGTAGGGGGCAGCCCTCCACCCCTGAGCCATCCTAGCCCAGTGTGGATGAGCTACTCCTATAGCAGCCTGTGTCTGAGCAGTGAGGAGTCCGAGAGCAGTGGAGAGGACGAGGAATTCTGGGCTGAGCTGCAGAATCTTCGGCAGAAGCACTTGTCAGAGGTGGAGGCACTACAGACACTACAGAAACAGGAAATCGAGGACTTGTATAGCAGGCTTGGAAAGCAGCCCCCACCAGGGATCGTGGCCCCTGCTGCTATGCTGTCCAGCCGCCAGCGCCGCCTCTCCAAGGGCAGCTTCCCCACCTCACGGCGCAACAGCCTGCAGCGTTCTGAGCCCCTGGGCCCGGGCATCATGCGAAGGAACTCCCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGAATTATGAACAGAAGCCATGTGTCTCACCCACACCTGGGCCCACCATGGAGCTTATGCCCTTAGAATCTGCTGACCAACACAACTCTGCGAGGAAGACCTCAGCACTGAGGGAGTAGGAGGCTGGACGGGCGTGGACAGTGCCGCTCCCCTAGAAGGAAGAGCCAAACATGTAGGAACTGTTTGCTGTGTGTAGAAGGTGTATGTTCTGTAAATCCTCATCCTTGCCACCTCCCCAGCCGAGAGAGAACCACTAAACAGTCCCACCTGAGTCCAGATGATTCTAGAAGGCACACTCCCAGTTGGAAAGGAGGAGGGAAAATTAGTAGCAGCCAATAAAAATTCTGGAACCTAGAACCTGG EMBV3_26520 TTTGACATTTCAGTGGACAGTCTGGCTCAGGAAGAAGTTCTAAAGGATTTTGAGGAATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20218 CGGTGCACTCCTACTGTATCACCACATGCTACGTCAAGGAGAATCCGTGTACTACTCAAG Gene GeneID:519985|TMEM225:NM_001080284:90_cdna Constitutive 0 NULL GeneID:519985 29 GENE TMEM225 MGC133770 PMP22CD transmembrane protein 225 EMBV3_36677 AGTGTTTATTGGGTGCTAGACCTTAGGTATAAAGAAGTTCCAAAGGTAACTGGGGAGAGG Gene GeneID:537404|SMYD1:NM_001083484:125_cdna Constitutive 2 NULL GeneID:537404 11 GENE SMYD1 MGC137576 SET and MYND domain containing 1 EMBV3_34752 GGCTGCCCTTCTGTGGCCCCAATGTCATAGACCACTTCATGTGTGACTTGTACCCTTTGT Gene GeneID:513151|LOC513151:XM_002693592:69_cdna Constitutive 0 NULL GeneID:513151 15 GENE LOC513151 NULL similar to olfactory receptor MOR232-9 EMBV3_13100 GGGTGCGGTACCTGGAGGAGGAGAACCGAGGGACCTGTTGCAATGAGAGTGGCAAAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11446 AGGGGAGCTGGTGTTCGTGAGAAAATATGACACCCACCACATGTCCAGGCCTTCAACTGT Gene GeneID:617471|UPLP:NM_001168011:317_cdna Constitutive 0 NULL GeneID:617471 25 GENE UPLP UPLP uroplakin-3-like protein EMBV3_22285 CCTTCAACTCCACTTTCATCTCCACCATAGGGACACAGCTGGTCAGGAACGGTTTCGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04826 TCAGATCCACCATGTAACAGGTCAGACTTCTGGAATAACAACTTTCCTGGGCTGTCACTC Gene BVV0102_380211 + 0 NULL GK000019.2:14655029-14662231 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203691 TCONS_00203689 TCONS_00203693 TCONS_00203690 TCONS_00203692 TCONS_00203694 TCONS_00203687 TCONS_00203680 TCONS_00203681 TCONS_00203688 1 XLOC_124239 Coding TCONS_00203687 XLOC_124239 Coding Coding LOC100848840 6:87901916-87912054 j TSS152525 1900 1 TCONS_00203687_2 103 6 0.813159711946335 0.000830451038204984 0.000393174693348375 0.00108558624178095 0.000479186927013467 0.00072620097037153 0.00042106847177456 0.000158477252900694 0.000768515705211205 0.00069850566920809 0.000229698276636957 9.00176292420698e-05 0.000125827041455768 6.15468026643918e-05 0.00010150750916284 0.000140012977444094 0.00278974913774301 0.000249023799633946 0.000699794942359214 0.000786211366029235 0.000613433638190792 0.000324343922954599 0.000361911420193731 0.00018233150807035 0.00057003935304302 0.00128454508796927 0.000368587460359981 0.000216167191233289 0.000111517410113024 0.000150702011841224 0.000138193324499837 XM_005208085.1 RUFY3 PREDICTED: Bos taurus RUN and FYVE domain containing 3 (RUFY3), 0.0 3268 100.00 0.953157894736842 NM_001037442.2 RUFY3 Homo sapiens RUN and FYVE domain containing 3 (RUFY3), transcript 0.0 1249 80.04 0.734210526315789 TCONS_00203687_2 sp|Q8R4C2|RUFY2_MOUSE RUFY2_MOUSE RUN and FYVE domain-containing protein 2; 4e-13 66.2 52.46 0.563106796116505 1 coding 0 0 0 0 -0.334975377978915 0.0765002113818406 0.0179919080127185 0.700333121388259 AGATTGCGCCAGGCTGAGCGAGGCCGCCAGTCTGCTGAACTGGACAACCGGCTCTTCAAGCAGGACTTTGGAGACAAGATCAACAGTCTGCAGCTGGAAGTGGAGGCGCTCACCAGGCAGCGGAATCATCTTGAGTTAGAGCTAAAACAGGAAAGAGAAAGAAGGTTACAAAACAGCAGGAGCATCCCAGGAAAGGGATCCCAGAAGCCAGAAGAACCCAAAATGGATGGGAAGCACAAAATCCAAGAGGAAAATGTTAAACTAAACAAGCCCCTGGAAGAAAGCCACAGGCTGCAGTCTCACCCTGTGGATCAACAGGATCAGCCGTTGCCCTCCGAAAAGCCACCGAAGTATTGTCAGCTATGCCAGGAAGACTGCAGCCTAACAAAGAATGTATGTAGGAACTGCAGAGGAACCTTCTGTAACATCTGTTCAACAAACGAACTGCCTCTTCCTTCAAGTATCAAGCCTGAGCGAGTTTGCAATCCCTGCCACGAGCATCTGATGAAACAGTATTCTACCAGTCCATCGTAAGATGGAGGCCAAGATCTGGACCAGAATGTATCCACCCACGTTAGATGTCAGAATCCCCTAAAGCAGACTTTAGAACCAACTCGAGTTGATAGGAATGCTTTAAATAAACCAGGTCCAGGAAGAAAAGGCAGTGGTTAACAGTGCTGGAAATTTTGTGTGTTTTCTCTAATAACTGTATGAATAAAAGTTACTCATTTGAGCCTCTCTGCTAAATCTAAACAACCTCACTTTGAAGCATTGATCTGCTAGCTTGTCTTTGGAAGGGCTATTCATTTTTATGAATAGTGATATTAATACTGAGCTGCATGTTAAAGGAGAGAGGGTCCTTAGTGAATAAGAATAAAAAGGAAAACGATCATCCCTTTATTATATTTGGAGATTCAAGAGGGAAAGATCATTGTTAACCGAGATTGAAATGATAGAGGTTACATGTTCTCTCAGGTGCTGCTAGACAAACATTATTTCCTCTTTACCCCTCCCACCTACCTCTTCTTTAAAGGATCTCTACCAAACTGTGAACCCAAACTCAGGGAAAAGAAATTAAAGAGTAATATAAATTTTGAATGTACTTAATATTATAATGTATTCTAGTTTTAGGACCAGAATTTTCTAGTTCTGGCCTACACGTTTTCACTATCAGAATAAGGAGGAAGAATGTTTGCCGTTTTTCCACTTACTGACTTCAAAAGTAAATACCTGCCCTTTTCAGAATCTGCTACGCAGCAAGCCAGCTCTTCCCCAGTCTCCCTCCTCTCTGGGTCATGGAAATTATAAGGGGTTTTAAAGATAGGGTTTGACTTTTGCAAACAGGAAGTACTAAAGCAAAGCCATGTCAGGTGTAGAGTGAAGAAATTTAATTTGTCCATGGCTGAGAATATTTGTTAAATTCTTTCGTGAATAAGGGATTCCTTATTCCAAGCCAAGATTCAGAACTGGTAGACAGGTTTTTGGAAAATATACTCAAAACAGTTCTTAGCAACAAACGCTTTGGGGAAAAAAAAAAAGATGTGCATTCAGCAGGGGAAGGCAGGAAATGGTCTATTTTCCTTTGATTATGTTGCATGTACATAGATTGTTTGATTCCAATTAAGACCTAAGAAGATTCTGTTAACTGGTTTAGAGTTATGGGGTGGAAACATCCTGGAACTATGATATTTGATAAATTCTGTCTCCTAAAAAGAGTGACAGCCCAGGAAAGTTGTTATTCCAGAAGTCTGACCTGTTACATGGTGGATCTGAATTTTAAGAGTCCTAGGGAGAAATAAAATTCGTTAATTCCAACATCGTTTGTTGTCATTTTTTCTCTTTAAATAATATCTATTGCTTGTGATTCTCCATCTTCCTTATTTTTGACTACATATATGTG EMBV3_25355 CAGTTCAAGGAAGCAGCTGAGAGCGGTGAGTCGGGTCTCTGTTTGCCCTACAAGATTCAT Gene BVT0102_190910 + 0 NULL GK000016.2:35634264-35727293 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069078 TCONS_00069077 TCONS_00069075 1 XLOC_041855 Coding TCONS_00069078 XLOC_041855 Coding Coding LOC100847722 16:35698744-35700040 = TSS51570 1296 1 TCONS_00069078_3 431 1 0 0 0 0 0 0 0 0 3.19456978192347e-05 0.00026177704928484 0.0258750419983856 0.0106325582911566 0.00856205661761428 0.0143790662030744 0.0248034990699384 0.0105907513175978 0.000339283995637279 0 0.000284390985533163 0 0 0 0.000249199581592619 0.00118916624484937 0.0015004526629899 0 0 0 0.00287553102279775 0.00182234980929213 0.0010818275468067 XM_005194802.1 LOC100847722 PREDICTED: Bos taurus putative beclin-1-like protein-like (LOC100847722), mRNA. 0.0 2338 100.00 0.999228395061728 NM_019584.3 Becn1 Mus musculus beclin 1, autophagy related (Becn1), mRNA. 6e-138 495 71.46 0.743827160493827 TCONS_00069078_3 sp|A8MW95|BECN2_HUMAN BECP1_HUMAN Putative beclin-1-like protein; 1e-157 457 59.53 0.990719257540603 1 coding 0 0 0 1 -0.230874284501995 0.344727245286664 1.62199782519646 8.22357519545997e-05 ATGTCCCACTTCTGCTTTCTTTGCCAGCGCTGCAGCCAGGCTCTGAAGCTGAATCACTCTGTGGAGCCCTCCCAGGAACCTGGAGCTTCGATGCTCATCTCAGCTCAGGGAGAGACAAGAGAAACACCGGAGGGAGGCCCTCCCTCCAAGGAGGAGGCAAACTTTGAAAATCTACAGGATGGCGCCTTTTGCAGGACTCCTCACCCCCCCAGTGGTGGGATGTCCTGGGACTATTCCAGCTTCACCCTGCTTGGGAGGTTGGAGCCCTGGAGGAGTCTCAACAGCATCCAGAAGACTATTAGGGACAGTTCTGACATCCTCTCTGGTGAAACAGAGGTGGACCACCCGCTGTGTGTGGACTGTACTGACTATCTTTTAGAGGTACTGGACGTTGAACTCGCCATCACAGAATCTGACGTTCAGAACTACAAACGCTGTTTGGAGACCAGGAAGTGGTTGAGTGGGGACGACAGGGAGATGCTGCAGGAGAAGCTGAAGGGCCTGGAGTTGGAGGAAGCGAGGCTACTCCAGGAAGTGGCAGAAGTGGAAAAGAACCAAGAAAGGGTAGCAGCCGATCTTGAGGCAGCCCAGGCAGAGACGAAGATGCTGGAGCAGCAGGAAAAGCAGTACTGGGAGGACTACAGTCAACTGAAATGGCAACAATTAGAACTAAATGAGGAGCTGAGCAGTGTGGAGATGCGACTGCAGTACGCCCAGCTCCAGTGCAACCAGTTGGAGAAAACCGACGTCTTTAATGCCACCTTCGAGATCTGGCAAGACGGCCCCTTACCCGTCATCAATAACTTCAGACTGGGCCGCCTCCCTACTGTCCCTGTGTGCTGGGATGAGATCAGTGCAGCCTGGGGACAGACAGCCTTGCTGCTCCTCGCCCTGGCCAATACAGTTGGACTGGAGTTTCAGAGGTACCATCTCATCCCCTGCGGAAGCCATTCCTACCTGAGGTCTTTAATAGATGATTGTGCCGAGTTGCCATTGTTCTCTAGTGGGAAGCAGAATGTTTTCTTACATAACAAATTTGATCAGGCTATGATGGCTTTCCTGGACTGCATGCAGCAGTTCAAGGAAGCAGCTGAGAGCGGTGAGTCGGGTCTCTGTTTGCCCTACAAGATTCATGTGAAGAAAGGCCTGATGGAAGACCCTGGAAGCAGCAGTGGATTCTATTCCATCAGAACCCACTTGAACACGGAGGAGGACTGGACGAAGGCGCTCAAGCTCATGCTTATCAATTTTAAGTGTAGTCTCACTTGGGTCTCCTTAAGGTATGGTCGAAAATAA EMBV3_13213 GGGGTGAGGATGGGAACACTGTACCTATAGACATCATGTTCTAACGGATTCATTCCCAAT Gene BVV0102_038006 + 0 NULL GK000018.2:47063866-47089345 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09183 TCTCCCTGTGTTTGCAAGTTCAGGCTTTCTTGGAACAGTCTGTCATTCAAGGGCACCTTG Gene BVV0102_101331 + 1 EMBV3_19555 GK000007.2:12426191-12442492 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30906 CAAGAGTCCTTGCAGCAGTGCGCCTAATGCAGGCGGGACTCAGCGGTCCCACACCCACGA Gene BVV0102_096624 + 0 NULL GJ060128.1:1-3031 Un NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31174 TGAAGTGTGAGCAAAACCGCAGTGCCTACCATCAGAGGAGGAAGCATCACATGGCTTGGA Gene GeneID:790562|LOC790562:XM_002707905:503_cdna Constitutive 0 NULL GeneID:790562 17 GENE LOC790562 NULL similar to testis-specific protein EMBV3_00486 CTTGCCTGTTGCTGCCTGGAATATATATCGAAATACACAACCGAGGGCAGCTGAAGTCAC Variant GeneID:508912|CNIH4:NM_001034338:35_cdna 333^379 1 EMBV3_14708 GeneID:508912 16 GENE CNIH4 MGC127199 cornichon homolog 4 (Drosophila) EMBV3_30297 GGACAGGTGGTTCTAAAAGCCATGATCCAGACCTGGAGTCAAGATGTAAGACATTTCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15807 CGGTTCAGACGTTGTTCTGGTAGTGATGGTTGTGAACTTGTGAATGCGACCTGCATACGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27633 ACGGCTCTGATGAATCCCAGGAGACATGCACCCCCAAGACGTGCTCCCAGGATGAGTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25681 GCCTTTGTTCTCTTTGAATCACTGTTTGCTGTGCTGAGGACTCTCAAATTTATCTGGTCA Gene BVV0102_156421 + 0 NULL GK000009.2:63764020-64687649 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08430 ACCTGGTTTTGGGGTCTGCTTTGGCCTCTTCCTTTTACTGTCATCTTATCCACCAGCACT Gene GeneID:618104|LIN52:NM_001102316:226_cdna UTR3_Alt 1 NULL GeneID:618104 10 GENE LIN52 MGC165675 lin-52 homolog (C. elegans) EMBV3_24070 TGTTCAGCTCTATAACCACTCCTTATTCGGGGCACCTGCCTTAACCTTGAGAATCCCAGG Gene BVT0101_034326 + 0 NULL GK000002.2:59083110-59143317 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00109555 1 XLOC_065459 NonCoding TCONS_00109555 XLOC_065459 NonCoding NonCoding - 2:59098132-59098589 - TSS81176 457 1 TCONS_00109555_1 48 1 0 0 0 0 0 6.48208089124083e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00023913879031255 0 0 0 0 0 0 0 0 0 0 noncoding CAGGACGTTTAAACTAAAACCCAGCAGAGGAGAAGCAGTCGTCTTGAGAGCACAGAAGAAGAAGAGATAGTCTGTCAAGTGGAACAGTTGGTTTTGTTCAGCTCTATAACCACTCCTTATTCGGGGCACCTGCCTTAACCTTGAGAGTCCCAGGTCACAATGATAATAGCTAATTGGCATTTAGTGTTCAGCTACAAAATACCATTATTACAGTGTTGCTCCAGGAAAGCTTATTGCAAATGAAGAAATTGAGACTCAAAGAAGTAAAGAGAGGGATATCCAACCTTATCTATTGGACTCCAGAGTGTATGTCTCCCCCTCCCCCCCATGGTAATTGTATGCAAGTGAGTGAGCGTGACCCAGAGTCACCCAACTCCAGGATCTGAAAAACTGTTCAGAGTATGTTCTCTTGATGACCTGTCTATAAATCAAATTGAAAATAAATCACAAATGTTTT TCONS_00105360 . 5' 246039 TCONS_00105360 . 5' 246039 EMBV3_34157 CTGCAGCAAACTTAAGACGGAAACCCAGACAGCTGAAGAGGAAAGGGATAAGGCACAGAG Gene BVV0102_261629 + 1 EMBV3_26955 GK000010.2:49829349-49860061 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017218 TCONS_00017217 1 XLOC_008990 NonCoding TCONS_00017217 XLOC_008990 NonCoding NonCoding - 10:49841728-49859806 - TSS11811 1925 4 TCONS_00017217_3 35 0.0711688311688312 4 0.89373236709631 0 0 4.98679157008285e-18 0 0 0 8.66978989072726e-17 8.54480212118904e-236 0 1.20609047708465e-92 1.11375654934772e-05 2.56286553521137e-05 0 0 0 0.000540899450423661 0 0.00132985178791705 5.20165601329016e-12 0 2.8619618310669e-19 0.000101066703179023 0.000215670984032636 3.68098360722555e-05 0 0 0 0.000141576853832516 0.000354561604636871 0.000324019531304012 XR_226896.1 LOC101902861 PREDICTED: Bos taurus uncharacterized LOC101902861 (LOC101902861), 0.0 3056 100.00 0.87948051948052 0 noncoding 0 0 0 0 0.110860594592124 0.645487484723404 -0.00177606846709943 0.969362393734095 CTTTCTCTGCTTCTCCAGCGCCACGTCGAGTTCTCAGCCCTGCCTCAGGTTCATATCAGTACAGTTGCAAGACTTTAGTAGACTATGAGGTTGGTTTTTTTTTTTTTTTAAGGCGTCGATGCAATGGAAGGAAGAACAGTTCCAAGAAACATAAATCGTGATTCCCCTGAGCTGGGCCGTTGGCATCCAGTCCTCGGTTACCGTCTGCAAACATATTAGCTTAACCTCTGACCAGCCATTCCCGGGAGGAGCGCTGGGAGGAAGAGTTCCGCAGTGTCCTGGCTGGCAAAGGATTCCTCCGCCTTGGGGCACGCTGTTGAGCGTCATTTCATTCCTGGGAATTAAGAAATGGCGAGGCCAAGACATCATTGCCAAGCTCACATGAAAATGTCCAAAAATATAGTGGACTGAAATGGAATCTTCAATAATGACATAAATGAGGATTGAGAGCCTGTGGTATTCATGTGGGCATTCCGGAGAGCTGCAGCAAACTTAAGACGGAAACCCAGACAGCTGAAGAGGAAAGGGATAAGGCACAGAGTTACTGGATAGAGATCAGCCCAGAGACCTCCACCAGTCAGGCCTTACAAAGGATGACTACTCGCCTGGAGCTGCAATTATTCATCCTTCATAAACAGAGATCGCTTCTCAGAATTGTTAACATTGCTTCTGTTAGTCTTTAAACAAAGCGGTCTGTTTATAAGTTAGGAACATTAAAAAAAAAAGTCATCCACCTTGTATTGTTTAAAAAAAAAAAAAAAAAAGAAGTCTGCACACACTCGATACCAAACTGAAAAGGAATGGAGAGGAGATGGAGGCATAGCCTGAGACCCACATGGGTTTTTAACTGGCTAAGTTCAATTTTCTCTTTCAAGGCTGTAGTAGCCATTTTAAATATTTAAACATTAACATAAATACCACACAAACATCAAAGCGTTCTGGGGAGGAGGTCATGCCATTATTTACCCAAATGCTCAAGTCTCTGAGGGAGGGCACCTTGGGTTTCAGCTTGGGCTCAGGTGCTGGGCTCACTTTCTCTTTTTTTATTTTCTAGACGCCAGAGTCCAAGCATTAAAAGGTAAGGAGAGTCCAGCAAGATAAAAGTAACATTTAAAGAGTTAACCATTCTTTTTTAAGTGACCTTCTTGGGAGGATACCAACTTTTCCGCCCCCCAGATTTAGAATCCACTTCCAAATGATACAACTGGAATTTAATTCCCCAAAAGAACAACTTTTGCAAAGGAACCTTTATCCCATTTAGTATAGCTTTGAGCTCTAGAGGAAGGCGAGCCATCTGACTTACCCTGCATGAGGATCTGTAGTACTGATTACCACCAGTTCTGATATGTCCAACTCCAGTAGACTTAAGATCTGCATCGTCCATATCATTGGCTTGGCCACATCGTTACATATGTGGGGGCAGGCGTATCTGGTACCGCAGAAACAAAGGTGAACAGATTGCCAGTAAGACTGATCACTATAGCCTCAAGTTTAGGCTGAAAAAATAGCCTCCCTTGATTTCTCTGCCCTCAGATTGCCCTAGTTTCCATTCCGCCTCCCAATCTAGCTGACATATTTCAGCCACAGTTTCCATTATAGAAGTTTAATCATGTGGCCCACCTCTACTGCCAGCCTCATTAAAAAGCTTTTGATTATTCCCCATCTCAAGACAAAGGCTTCTGTCTCTAAGAAGGCACGTGGGGCTTTTTATTGACAACTGCTCCCCACCACATTTTCTTAGGTATCTTTCGGTTCCTTCCCCATAAATACCCATGGCCAGGTCTTAGGCACCCTGGAAGGCCTGCCATTCCAACAAGCGGTGCATGTTTCTACCTCTGCAGCATGGATTTTACTGTCCCTCAGCCTGAAATTTCCCTTCCCATCTGACAAACTCCTTTCAAACTTCAGCTCAAACGATACCTCTC TCONS_00013888 r 5' 0 TCONS_00013888 r 5' 0 EMBV3_18510 AGCATGAAAAAGAACCCGACGGTGCAGGGCACTTTCAGCAAACTCTTCGGCAAGAAGCAT Gene BVT0102_440123 + 1 EMBV3_13234 GK000023.2:15863803-15887149 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134221 TCONS_00134220 1 XLOC_081340 Coding TCONS_00134221 XLOC_081340 Coding Coding C23H6orf132 23:15841663-15874544 = TSS100103 2746 1 TCONS_00134221_4 622 4 0.916605839416058 2.55757283645316e-07 0 1.68143169827536e-06 0 4.47620103949565e-07 2.70422320114338e-06 0 0 0 0 0 0 6.84812711196796e-08 0 5.07639813330338e-06 0.000899645031991443 3.02237007350532e-05 0.00109380707909651 0 0 1.1965213342932e-06 8.10449612260137e-06 1.2845984940585e-10 0.000917820938131893 1.2613144981546e-05 2.5630206802049e-06 0 4.96049987392437e-07 1.76607293069389e-06 0 XM_002684509.2 C23H6orf132 PREDICTED: Bos taurus chromosome 23 open reading frame, human C6orf132 (C23H6orf132), mRNA. 0.0 4655 99.77 0.947195921340131 NM_001164446.1 C6orf132 Homo sapiens chromosome 6 open reading frame 132 (C6orf132), mRNA. 0.0 2060 77.22 0.947195921340131 TCONS_00134221_4 sp|Q5T0Z8|CF132_HUMAN CF132_HUMAN Uncharacterized protein C6orf132; 1e-179 546 64.18 0.836012861736334 0 coding 0 0 0 0 0.0920501098729293 0.548480348520503 0.00440831426872834 0.9284892896186 ATGAAAAAGAACCCGACGGTGCAGGGCACTTTCAGCAAACTCTTCGGCAAGAAGCATGCCAACCCGCCCGCCACTTCCCTCTACGCCACCAACCCTCCCTGGATCTTCACCCAGGAGGCCCCGGAGGAGGGGACCCGGGGCTTCGAAGGGCCCCATTCGACCTCACTGCCTCCCAGCTTCCATATCCGCTCTGCGTGCCAGGCCTACCCCGACAGGGCTGCTGAGCTAGCGCTCCCCAAGGAGCCCGGTGCTGTGGCACCGGCCGGTCCGAGGCGGGGCCAGCTCAGGTCCAGAGCAGTGAACAAGCCGAGACGCCACCTCCAGCCCCTCCCCTGCCCCCTCCTGCACCCCCACTCCCTCCGCCAGCACCCCCGCTGCCCCCAGCCGCCCCTCCTCTGCCACCTGCTGAGAAGGCAGCCCCTGCACCTGCTGGCTTGATGAAAAGACCCAAGTCTGGCTCTCCTGCTCCCAAACCCAAACCTGAACCCCCCAGCCCGGAGGAGACAGTGTCTTCGGAGCCCATGGACTGGCGGGACCCCAGCCAGATGGCAAAGCTGCGGGACCAGCTGTCAGCCTATCTTTGCGGCTCCAGGAGAGAGGACCGGCTCGCCAGTCACAGACCAGGTCCAACGGCAGCCTCTCAGGAAAGAGAGGACCACAAGCGTCCCAGCTTGCCTGCGAAAGAGGCGCCCCCGAGTCTGCTACAGAAGGAGGCCCCCCCGAGCCCGCCAGAGAAGGAGGCCCCCTCAAGTGTTCCTGAGGAGAGTCCCTGCAGCCGGCCAAAGAAGGCTGCCACCAGCCTGATCCTCCCTCCTGTGGACTACCTCCCCCAAGACGCACCAACTCCTAGCGTCTGGGAGATCCGGAAGAAGCTGGAGGCCCAGCTTTCCTCATTAGCTGAGAAGGAGGCCAGGCCCAGCAGAGGGTCTCTGCCTCCCAAACCTCAGCCAGAAGGGGGAAGAATCTTTGAAAACAGAGATGATAACAGCAAATTCCCCAAGCCTGTGGCCAAGAATCTGCCACCTCTATCCACCACCCCTCTGCCAAACACACCACTCCAGTCCAAGGCCACGCCCGGACCAGCCACACCACCCAAGGCCACGCCCGGACCAGCCACACCACCCAAGGCCATGCCCGGACCAGCCACACCACCCAAGGCCATGCTTGGACCAGCCACAACACCCAAAGCCGTACCTGGACCAGCCACAACACCCAAAGCCACGTCTGGGCCAGCCACACCACCCAAGGCCACACCTCTACCCATCACATCTTCCCAACTGATAGCAGAAAAGAACCTGGTCCCAGCTGGGCAGTGGGAGAAGCCAGAACATGAAGAACTTGCAGTGCCCTCCAAGCCAGAGGTAGAGGGGCACTCCTCAGAGACCAGTAAGCCTCCTACACAGGGAGCCCTCTCATCTCCAGCCTTCCCCCCAAAGATATCACCTGGGCGAGAAGAGGTGCCGTGTCTCTACAAGCCCCATTGCAGCCAGAACAGCTCCAGCAGAGAGGTGGCTGTGGTGATGCCCACCCTGTCCAGAGGAGAAGCTGCAGGGTCAGGCAAGCCTGTGGCGGTGAAGGAGCCCCAGGAGCTGCCACCCAAAGCCCCAGTCTCATCCCAGGCTGCTGACGAACTCCTCAGGCACCCGGTGACGGGGGAGGTGGTGGAGAGGGGCTCCCCGATGGCCCTGCTCCTTGCGGCCAAGCAGAGGGCCCAGAAGGGGAGGCCCAGGGGGGCCGCCCTGGGCCGGTCCTCCCTGCCAGGGAGTCTCCAAGGCCCCAGCCAGCCCAAGGCAGGGTCTGATACCATCTTGTACAACGAGGGCCAGCCCAACTCCTTCACTGTGGTCCCCAAGGTGTCCAAGGAGACTGAGAAGGTCCCCCAGCTAACCTCGCCAGGACAACCCAAAGGACTCTGTCAGTGGGAACTCCAGCCCCGCAGGGACCCAGAGGACACGGAGTCGTGCAGCGGGCCCAGCTGGACAAAGGTGAAGCCCAGGCCTCCGCGGCCTGGGAGAGACAGCGCCTCCAGCCTCCTCCAGGGCCGCCTGCTGCCCAAGTCTTTCTCCTCCCCTCCTTCTCCTTCCCACAGCCAGAGGAAGACAAGGAGGAGGAGTTCAACTTTGAGGTCATCCCGCCGCCGCCAGAATTCAGCAATGACCCCGAGCCCCCGGCCGCCCCCTTGCAGTATCTGGGGCGCCGGGGTTCGCCTCCCCGGAACAATTTCTCAGACTTGGGGCAGCCCGCGAATGCGGGCCCACCCCGCGTCTTCTCTCACTTCGCGGATCCAGGTCCAGCCCGGGGCCTAGAGCGCTTCTCCGGCGTGGGTGGGGGCCGCTCGCTCATCAAGAAGCGCCTGTACGTCGGGGAGCCCCACCGCAACCCAGGGCCGCCCCGCGGCGGCACCGGCCGCAGCCTGAGCTTCCCCAACTGCTTCGGGCCGCAGCCCGGGGGCCCCTTCGCAGCGCCCAGCGGCCCAGAGATGCGGCGCGTCAACTCGGCTGGCCGCGGGCCCCCCGGCGGCCTGCACTCGCGGAAGGTGTCCCTGGAGGCCCCTCGCGGAGAGGCCAAGTACAAAGCTCTCGGCGGCGGCGGCGGCGGCGACTACGGCTGCACGCAGGCCACCGGCAGGTCTCCCCACAACAACACGCAGTACGGAAGCTCCATCAACACATTCACTGTGAGGCCTGGGACCCGCCATCCCATCTCCTATGCCTACTCAGGGGCCCATTGGAAGGCCACGTCCTGA EMBV3_05528 ATGGGAGTGGTGGAGACCAAGTCCTAATGCTATGTAGTGGTCCCATAGAAAAGCCCACTC Gene BVV0102_038107 + 0 NULL GK000007.2:36107755-36197352 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15217 TCTTCTGTGAGGAGTGCCGCCTTACTCTGAGCCTCGAGAGCCAGAGCCCCACTGGGAAGC Variant GeneID:100125881|RAB8A:NM_001105481:2_cdna 652^954 2 EMBV3_10873 GeneID:100125881 7 GENE RAB8A MGC143064 RAB8A, member RAS oncogene family EMBV3_10264 CCAGATGTGGGCTGCTTCCCTCTTCACCTTGGAGATGTTGCTATAATTGGCTTGGACCTC Gene BVT0102_066162 + 0 NULL GK000004.2:79257185-79444178 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04597 GTCTCTGCAATCAAAGATGTATGGAAGTGGGTGAGTTTGGGGGCTGGTAGTGGACTTCTG Gene BVT0102_297552 + 0 NULL GK000001.2:112558339-112631056 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004877 TCONS_00004876 1 XLOC_001130 Coding TCONS_00004876 XLOC_001130 Coding Coding GMPS 1:112625904-112699577 j TSS2418 7272 1 TCONS_00004876_2 685 0.15497799779978 16 0.901509392985123 0.000850612198717511 0.00124938132272711 0.000708262977707988 0.000384693528019157 0.00065678968422477 0.000467325925501204 0.000577387837096224 0.000302262166427784 0.00103354019871862 3.37511478696264e-05 0.000113157876119681 4.63724174122304e-06 0.000158248724633444 0.000170751206434429 0.000923697111771796 0.000759000596432042 0.000150493529503244 0.000131860724733962 0.00100010257501424 0.00114418100166619 0.000502590941622512 0.000182757268662282 5.53533938733466e-05 0.000223288490269853 0.000729799883369037 0.000920578343024686 0.000529716344344528 3.0614841420423e-05 6.66471940867753e-07 0.000208436395726731 XM_005201719.1 GMPS PREDICTED: Bos taurus guanine monphosphate synthetase (GMPS), 0.0 6181 100.00 0.471122112211221 XM_005247865.1 GMPS PREDICTED: Homo sapiens guanine monphosphate synthase (GMPS), 0.0 4085 85.60 0.481298129812981 TCONS_00004876_2 sp|P49915|GUAA_HUMAN GUAA_HUMAN GMP synthase [glutamine-hydrolyzing]; 0.0 1392 98.83 0.997080291970803 7 coding 0 0 0 0 -1.91859264501958 0.0219139814952483 0.0587719330461004 0.412387657919591 AGAAAAGCTGTTACAGACAAAAAGAATGCTGGAAAATGCTGGAGGGGACCTCAAGGATGGCCACCACCACAATGAAGGAGCTGTTGTCATTCTGGATGCGGGTGCTCAGTACGGAAAAGTCATAGACCGAAGAGTGAGGGAACTGTTCGTGCAGTCTGAAATCTTCCCTTTGGAAACACCAGCATTTGCCATAAAAGAGCAAGGATTCCGTGCTATTATCATCTCTGGAGGGCCTAATTCTGTGTATGCAGAGGATGCTCCCTGGTTTGATCCAGCAATATTCACTATTGGCAAGCCTGTTCTTGGAATTTGCTATGGCATGCAGATGATGAATAAGGTATTTGGAGGTACTGTGCACAAAAAAAGTGTTAGAGAAGATGGAGTCTTCAGTATTAGTGTGGATAACACATGCTCCTTATTCAGGGGTCTTCAGAAGGAAGAAATTGTTTTACTTACCCATGGAGATAGTGTAGACAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTTCTGGGAACATTGTAGCAGGTATAGCAAATGAATCTAAAAAATTGTATGGAGCCCAGTTCCACCCTGAAGTTGGCCTTACAGAAAATGGGAAAGTAATACTGAAGAATTTTCTCTACGATATAGCTGGGTGCAGTGGGACCTTCACTGTGCAGAACAGAGAAATTGAGTGCATTCGAGAGATCAAAGAGGGAGTGGGCACATCAAAAGTTTTGGTTTTACTCAGTGGTGGAGTAGACTCAACAGTTTGTACAGCTTTGTTAAATCGTGCTTTGAACCAAGATCAAGTCATTGCTGTGCACATTGATAATGGCTTTATGAGAAAACGAGAAAGTCAGTCTGTTGAAGAGGCCCTCAGAAAGCTTGGAATTCAAGTCAAAGTGATAAATGCTGCTCATTCTTTCTACAATGGAACAACAACTCTACCAATATCAGATGAAGACAGAACTCCACGAAAGAGAATTAGCAAAACGTTAAATATGACTACAAGTCCTGAGGAGAAAAGAAAAATCATTGGGGATACTTTTGTTAAGATTGCCAATGAAGTAATTGGAGAAATGAACTTGAAACCAGAGGAGGTTTTCCTTGCCCAAGGTACTTTACGGCCTGATCTAATTGAAAGTGCATCTCTCGTTGCAAGTGGCAAAGCTGAACTCATCAAAACCCATCACAACGACACAGAACTTATCAGAAAGTTGAGAGAGGAGGGAAAAGTAATAGAACCTTTGAAAGATTTTCATAAGGATGAAGTAAGAATCTTAGGCAGAGAACTTGGACTTCCAGAAGAGTTAGTTTCCAGGCATCCATTTCCAGGTCCTGGCCTGGCAATCAGAGTAATATGTGCTGAAGAACCTTATATTTGTAAGGATTTTCCTGAAACTAACAATATTTTGAAAATAGTAGCTGATTTTTCTGCAAGTGTTAAAAAGCCACATACGCTATTACAAAGAGTTAAAGCCTGCACGACAGAAGAGGATCAGGAAAAGCTGATGCAAATTACAAGTCTGCACTCACTGAATGCCTTCCTGCTACCAATTAAAACTGTGGGTGTGCAGGGTGACTGTCGTTCTTACAGTTATGTGTGTGGAATCTCCAGTAAGGATGAGCCTGACTGGGAATCTCTTATTTTCCTAGCTAGACTTATACCTCGTATGTGTCACAACATTAACAGAGTTGTTTATATATTTGGCCCACCAGTTAAAGAACCTCCTACAGATGTTACTCCCACTTTCTTGACCACAGGGGTGCTCAGTACTTTACGCCAAGCTGATTTTGAGGCCCATAACATTCTCAGGGAGTCTGGGTATGCTGGGAAAATCAGCCAGATGCCGGTGATTTTGACACCTTTGCATTTTGATCGGGACCCACTTCAGAAGCAACCTTCTTGCCAGAGATCTGTGGTTATTCGAACCTTTATTACTAGTGATTTCATGACTGGTATACCTGCAACCCCTGGCAATGAGATCCCCGTAGAGGTGGTGTTAAAGATGGTCACTGAGATTAAGAAGATTCCTGGTATTTCTCGAATTATGTATGACTTAACATCAAAGCCCCCAGGAACTACTGAGTGGGAGTAATAAACTTCTTGTTCTACTAAAGTTCCGTGTGCAGTTTAAATTGTTTAGAAACCATTCCCAGTATTGAATGCAGTACTGTTAAAAGTGTTACTGGAGCAACCACATCACATCTGAATTCTCTGCAGCAAAAGTCTACGGCTTAAGAGCTGAGCTGGGGATAACTAAAAGGGACTGAAGAGTTCGTACGGGTATAATCAAAGCACCATTGCCTACACTCATACAGACTGACACTGCTTTTGCCTTTACCTCTGTCTCACTTGTTCTTTATGTATAAACTCACTGTGTCTATTGATGTCTCTGCAATCAAAGATGTATGGAAGTGGGTGAGTTTGGGGGCTGGTAGTGGACTTCTGTCCCCTTGCCAGTTTCTAAGAGATATTAGAAACACCATTATTTACCAATGTGACTTAGGATGTATACCTTTTGGCAAAACTGAATTTCCCTGTAAGTAACTTTATTTCTCCAGGAATGGGTCAACATACCAGATAAAGAGATGGGTGGGCTGTCCCACCCACTTTTGTAGGACACTGAGACCATAAAATGGTAAGCTACCTTAAGATGGAAAAGCACCAGGAATTTGTTGAAGTACTTTGGGTTTTATGTCCTTGCAGTCATGGGAGGAAGGAACTGTGAATGGTCTCCATTTAAAATGTTTTCAAATCATGCTCCACGTTGCGCTCTGTCGACCTGTTCATTAGTAAGGAGCTTTCTCCTCCCGGTCTTACGTCGCAAGCTCCCATAGCCTTGTAGAGGAAGTTTCTGTTCTGTCCACAGAAGAGACTGTCTTTGGGTCTAGTGTAAAGTTCAAGCATTTTTATCTCGTTTGGCCAGAGTGAAGCTCTGAGATCACAGAAACCATCATGCATGCCCACAGCTTACAGATGCATGCCCACGGTTTATATAATCTAGTAAAGAGCTGTAAAATGAACTCTTGGTGTAATCTATAGATATTTTTTTTAATGCACTGCTCTGAAGATTGTGACCTGTCTTGGCCCATGCCAAGTATTGCCAAACTTTGTACTCCTTTCTACCAGCTGTAAGGGAACATTCAAGAACTGGTATAGGACTTTTGCCATTGCCACCAGTTTCTAACAGATGCTTTTATAACATTCATATATGCACTATAAAAATAGACAGTACTAGATTTGAATTTTACAATCATTTATCTCTCAATATTTTAGTTGATGTTACTGTTCTAAAATGTTACCTTGTATTTTCTTATACGAATTCCATCTCAAGTTGCTGCCTCTTTTATGTAGTCTTCAAGATTTTCTGTATTATTAATCAGCTATACAAATTTGTTTGGACTCCACTCTTAGATAAATAATAAAATTACGCGTGGCAGAAGTCTTTCATTCTGGTTGGCCCAGGGTATAAGAAAACTGTGTTCCTGGACCAGCAAGGGAAGAGCTTCTGACTGTTGTAACTTATCTGTATCTGAGAGAGAGCAGTATTTGACTTCTACAAAACTTGAAGGGTTCATTCTCTGTCCTAACAATGAGGTACTCATAATGGCCTTTTACAGAGAAGGGTATACTAGTGGCCTGGCCTTAACAGATTTGAAGGTGCGTTATTTTAGAGCTGAAATAGACAGTATATAAAAGGCTTGTAAGCCTTTGTGTTTATGTGACAAAAGAATTCCTCTTCTAGCAAAAGTGTCTTATAATTTTGTATTCAGACAAGTAATAGGAATCTAGGAAGACTTTTTCCCTAAAGTATGTTCTGTGGAACACTGTTCACTTGAATGAACGATGAACATTGAACACCCTTCACTTAACACTGTTCCACAGAGATAAAGGGGTAGGTGGTTGTGTAATTTTGGGACGTGCTGCTCACTTGTCCTTCCGTCTTGGAGATTCATGGGTTACATATCTTCAAAGCTCTTAAGAAATCTTGAGGTTAGAAACAGTTGTTGCTTTTTTTAACCTAATTATTCCTGATATTTGTTCACTATACCCCCTTTTATATAATCCTTCTTAATAATAAAATTGGAAAAATTGCTTCTCCAAAACACTTGTCGACATGATATAGTAAAAAAACAATTCTAGAATTCAAAGATTTCTTAATATTTAGTACCCTGTGTTTCTTTGCAAAGCACTTTTTTACTTCGTGTCATGTAGTATTGCTCTATACCTTCACAGTATTTTATACAGGGGCCTGAGAGGAGTCAAGATTTCAGTGCCATTTTACAGTTAAGGAAACAAGCTCAGCTTAGTAGTGGTTACCTGAAGAACTTCAGAATTAAATGTAGGGTTTCCCAGTTATTCTTTCTTTAAGTGAATTTTTGAACCTATTTTAAAAATTACATAATTTATATAAAATTATATAAACTTATGGGATGTTTATCTTTGACCAAGGCTTTGGACAGTGGCTCCTTGTCTAATTAAACTTCTCATTATTTATCCTTGACAGCTCATGCCTGCACACCCTTCATTTACCACTTAGCTAGGACACCTCTCCATCTGAAAATATATTTTACTAGAAGGAGGAAGGCAGGTTAGTGAAAGCATTTATTTCTAAGATTGTTGTTGTTTAGTCGCTAAGTTGTGTCTGACTCTTTGCAACCCATAGCCCACCAAGCTTCTCTGTCCATGGGATTTCCCAGGCAAGAATACTGGAGAGGTTGCCATTTGCTTCTCCAGGGGATCTTCCCGGCCCAAGGATCTAACAGCGTCACCTGCATTTGCAGGCGGGTTCTTTACCACTGAGCCACAATTTCTAAGATTAGTAGGCATGAAAGAAATTTTGAGAACCAAATATCTTGTCCGAGCTTTGTGGCCCCGTCTGTGATCAACAGCTCTGCTAGAAGTAACAGGTTGGTACAGTTGCTGAGAGTAGGTCTTTAAGATGTATCTGGGAGATAAGGTTACCCACTCATTCCCATCTTTTGCCTTATCCCTTATCCTAAAATAGGTACATATGTGTAGCCAAACAAACATTGTAAAAGTTCATTTCCTTACTGTGTTTGGGCTTATCTCTTGATAGCCTGTTTTTATTGAGTAACTAACATCAGACCTCTAGAGAGTGACGGCATTCACAGTAGCTTTCATTTTCATCTTTAGTGCTTTGTTTTGCCATTAAACAGCTATGTGAAACTGGTCAAGTAATTTCTGGTTTTTTACATGTAAGATGAGGCAGTTGAACTATATAGATATCAAATCCAGCTCTAAATTCTTACTTTATAAATAAGAAAAAGCATAGCAGGAGATAGAATGGAGAAAATGGGATGGTTTTAAGTGCTTTTAACATCAGATTGGATCCAATCAAATGTAAACATCGAAATACATTGTAAAATCAGATGATTAATTACCCTGTTTTGAACCCGAGGCATAGATCAAGGTTTGACCATGTGAGAATCTTCTGTTGTGGCCGTGACACTTGCAAGGTAACTCATCAACAATGTGATCCTAGTTGGCAGTCTCTTTACTGTGTGTTTTTAGAAAAGTTGACAATATGCTTTGACTTTGAGACCTATGAGAAGTCTCCCGTACTGAGTTACATAGGATCCAGGTCTTTTGCTCTCTCCACTGAAGAGATGATGCTCCAGGGCTCTTCAAGGTGAGGCTTAACAGGAAGTTCTCAGTGTATAACTTACCATGAGGGAAAAGTGTACTTTCAAGGTGTTAATAAGTGAGTGATTAGTTCCTGAAAACAGTGCTGTCTCCCTGAAATCCTCTTGATACTCTCATTCCCAGTGTTAAACCTGCTTCTTTCTACCTTTCCAAACAGCTCCCTTTGCTACTCCCCACACCTTTCTTCTCTCTCCCCTTCCCTTGAATTCTCTTTGAAATAGGATGTGAACACAGCTTGGCTGTTACCTCAGTAGGTGCTCCTTTCATTGGCCCCAGTTAGAATTTAATAGAGAACTGAATACAGGTTGGATGTCTCTATCCTTGGAAAGTTATTGAAGGGACGCACAGACACTGTAGGGAACCACGGAATCTTTTTCACCAGCGTGGGACAATAATGGTGGCATCTGTGACTATTAGGTTTCCAAAAATTTCTTCTGGAAATGACAGAAGATTTGAAATCCCCCAAAGCTTGCTGCCATGAAATTAAAAGGTGCTTGCTCCTTGGAAGAAAAGCTATGACCAACCTAGACAGTATGTTAAAAAGCAGAGACATTACTTGATGGTCTGTCTAGTCAAGGCTATGGTTTTTCTAGTAGTCATGTATGGATGTGAGAGTTGGATCATAAAGCTGAGCATCAAAAAATTTATGCCTTTGAACTGAGGTGTTGGAGAAGACTCTTGAGAGTCCCTTCAACTGCAAGGAAATCAAACCAGTCAATCCAGAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTCCAATACTTTGGCCACCTGATGTGAAGAACTGACTGGAAAAGACTCTGATGCTGTGAAAGATTGACGACAGGAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGCATCACCTACTAGATGGGCATGAGTTTGAGCAAGCTCCGGGAGTTGGTGATGGAAAGGAAGCTTGATGTGCTATAGTCGATGGGGTCACAGAGTCGGACACAACTGAGCAACTGAAATGAACTGAAAGATGGCCAAAATGCCAGCCCTCAAAACCCCAGTCTTACATACTGAAGAGGCTCGGGTATACCACCCAGTTCTAACCTTTTTCAGTGGTTCTCAATTCTGGATGCCTGTTGTTATTACTTGAGAAGTTAAGTCTGTATAATGCCCAGACCCTTCAATCAAATCAGTTAAATTAGAACCTTGGTGAGGCCCAAGTATTGACAGTTCAAAATCTCCCAGCTAGAGTAAGTTGTTATTGAGGGACAGGCCTGGCATCTCTGCTGCTGCTGCTAAATCACTTCAGTCATGTCTGACTCTGTGCAACCCCATGGACTGCAGCCTACCAGGCTTCTCCGTCCATGGGATGGACGGAAGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCATGGCGTCTCTAGTTATAGCTTAAAATCTTGGTCAAACCTATAGGTGAGGAGACCCTAGATACTGTCTTGATAAACATCTGTGTACTAAGTTAGTTTAAAGCTAGGGACCAGACTCTGGAACTGACTACCTATACAGGTTTCCCCACTATCGAAAAGTAGGGCTTTGCTGTGAAACTTTTTCATAAGCCAAAGGGGTATAAAGCAAAGAAGCAGTCAC EMBV3_26429 CAAGGGTTTCCGCGTCCTGAATGCCTACAGGTGGCTGTGCCCAAAAAGAAGATGCCAAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03186 TAGATGGCTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAGTTTGAAATTCGTG Gene GeneID:100140537|POLR3E:XM_002698019:202_cdna Constitutive 0 NULL GeneID:100140537 25 GENE POLR3E NULL polymerase (RNA) III (DNA directed) polypeptide E (80kD) EMBV3_00103 GATGACAGATGTGAAAAGCGGGATAATCTTCTTCGTGGCAAAGGGTTCTCTGTCTGCGGG Gene BVT0102_117741 + 0 NULL GK000025.2:2304546-2322513 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144267 TCONS_00144262 TCONS_00144263 TCONS_00144264 TCONS_00144268 1 XLOC_088508 NonCoding TCONS_00144263 XLOC_088508 NonCoding NonCoding LOC100847890 25:2312862-2314830 = TSS108354 725 1 TCONS_00144263_1 56 4 0.633451957295374 0.000278750067825334 1.34983300771221e-12 0.000155231921833586 0 0 2.35424482877339e-05 4.22796329977569e-08 0.000583953601377846 1.74408781335534e-05 0 1.80570802781083e-05 6.48620434275693e-06 3.31025900913323e-17 1.29738109422416e-06 8.45896701178084e-07 0.00962588687306035 0.0083331249834712 0.00277030749129744 0.000286579896068306 0.000476984059535263 0.000786170077179638 0.00824393840333164 0.00926416334403568 0.0076207903677066 0.000557685033226654 0.000171166722911356 0.000284473246956784 0.000328576721832888 0.000192378094980364 0.00462726803738256 XR_139036.2 LOC100847890 PREDICTED: Bos taurus uncharacterized LOC100847890 (LOC100847890), 0.0 998 100.00 0.761379310344828 0 noncoding 1 0 1 1 -0.641693868513698 0.00558134261042539 0.0510124750590101 0.634779629683584 CTCAGAAACTTGGTTTCCTGGAAACTGCTGCTTTTCTAAGAGGCCGCGGTGGTGCGGTGCGGTGCACGGGAGGGAGGAGAAAGCAAATAGCAGTACCAAGTCCATTTGCTGATCTGGCCTAGTTAGAGCTGAGAGTCGGAGAGGAGAGAGCTCGGGTTCCTTCAAAAGGGGTGAACTCTGATACCTTGAGAAGATGACAGATGTGAAAAGCGGGATAATCTTCTTCGTGGCAAAGGGTTCTCTGTCTGCGGGTTTAACGGCCATAGGGTCTGCGGTGTGGCCTGCTGCGCTAGTAGTGGTCGCTGGGATGGCCTTGTACGCCTGGAAGAAGAGCACTGAAAGACCATGCCCTAAGAGGTCCTAGGTGGACATCAGGTAAAAATGAACAAGAACCCTAAAATGTATTGAAAGGAATCCTCTCCCAGTCCCCTGCAGACTGGAGAGTCCACCTTCCTGGGGTCAGGAATTCTTTGAAGCAACATTTTATCTTTGGGGTTTGAACAAAATCAACTTGTGGGCAAAAAAATAAATTCATTGAATGTGCCTGACTCTATTACAGAACTGGTGTCTGAATCACAGGATTCAGGGTCCTTGGAGGCCCAGCTCTAACCTGAGCAGCCCTGAACCATCCCCACCCCAACCAGGCTCCTGACCCTTCTCCAGGGCTGCCTGGCCCGGGCCACCTCTCAGCCCATGGGGAGCCTTTTGGGGCCTCTGTGCTCTGA EMBV3_38424 GGGGGCTATCGTGAAACCTAATCCATAAACTGAACGGAAGTGACTGAGATTTTCAAGGCC Gene GeneID:282681|UPK3A:NM_174709:2_cdna Constitutive 0 NULL GeneID:282681 6 GENE UPK3A Upk3 uroplakin 3A EMBV3_00797 GAGCATGGGTTCATATTGTAGTTCACCAGCATAGTTGCTCTGCGGCATGTGGAATCCTCG Gene BVT0102_307134 + 1 EMBV3_13184 GK000003.2:8463400-8483557 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10940 AAGTCGATTGACATAAGGAGGAGAGTGAAACCAAGACATGGCAGAGAAACGGAGCTGGGG Gene BVT0102_170666 + 1 EMBV3_05533 GK000005.2:19669794-20898138 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191000 TCONS_00190998 TCONS_00190999 1 XLOC_116786 NonCoding TCONS_00190999 XLOC_116786 NonCoding NonCoding - 5:19733670-19740107 - TSS143212 1103 1 TCONS_00190999_3 93 0.114233907524932 3 0.829086389061529 8.7388688676487e-05 8.47951818755998e-05 3.27686306299171e-05 0 3.6170933727504e-11 0 0.000148733433812847 0.000115733459728376 2.13411574341784e-05 0 0 0 0 1.70588485909178e-05 0 0 0 0 0 0.00028165949094521 0 0 0 0 0.00014762237432321 0.000102200829632629 6.16075577600923e-06 0 0 0 XR_231101.1 LOC101907760 PREDICTED: Bos taurus uncharacterized LOC101907760 (LOC101907760), 3e-15 87.8 77.17 0.113327289211242 0 noncoding 1 1 1 1 -0.0535887686395669 0.651348516497601 0.0130268661909525 0.874003171583817 GCCTGCGTTCTGCAACATGAGAAGCCACTGCAACGAGAAGCTTGCACGCCACAACCAGAAGTACTCCTTGTTTCCTGCAACTAGAGAAAGCCTGCATGCAGCAAGGAAGACCCACCACAGCCAAAAAAGGAAAAGATCAGAGAGCAGAATTTCAGAGCTGTAAAAGTAAGCATAGACATTCCCTGATTCAGGATTATATGTTGCAAACCATAGAAACCTATTCTTGAAAAACTCAAACAAAAAGAGAATTGACTGGAAGGCCACGGGTGACTCACACATCAAAGGACGCTCAAGGGCCAGTTTAGAAACAGCAAGAACCTGGAAAGCTCTTGGGTTTTGTGAGCACGTTTATCTGGAGTGACACTTTCTCTTTGGATGGTATGGGATGTGATGAGAGGCCTGATACTGCTGCAGCTGTTTTGCTACGACGGACATCAAGTTTGGAGTCAAAGTCGATTGACATAAGGAGGAGAGTGAAACCAAGACATGGCAGAGAAACGGAGCTGGGGCTAACTGCACCTGAAACCGTCCTTAGCCGTGGACCTAAAATGAGTGAGCCTATGTGCTTGATCAGTTATGCTACTTTGAGTTGGAGCTACTGTTATTCACGTCCTTCAGTTACTACCTTGCCAGAAAACTTTTGTGAGCTCTTGGGTCCGTGAATTACTGATTGCAAAATGCTGGATTATATGATATCTAAAACCATCTCTAGCAAAGACTTTGTACCATTAGTGTGATTAAAGACAAGTTGGAGAAATGTATGTTGGATAATTGGACCTGCATTCTGCAATGGATTTCAGCCTTATTGTTGAAGCACATTTACTATCTAGCTAGCTATTTTCAATTCAGAAAGAAGAGATTTCATAATATATTTTCCTTTTTGTATTCTGTGTGATTGAATATTTGTGGTTCTTACAACTTTTTGTAATGCATCATCTTTCTGCATAGTTTCAAGTGTTATTAATAATCTCACTTTCAGTTGTTTTCTTGGGCAACAGGAAATTCCAAAACATGGCAGGTATTAAATAATTGTATGTTTAATTAAAGTTATGATCTTATAGATAGTTTATTCCAAAACCAGTGGTTCTTAAACTCCACTGCAC TCONS_00194079 TCONS_00194080 TCONS_00194081 TCONS_00194082 r 5' 63073 TCONS_00194079 TCONS_00194080 TCONS_00194081 TCONS_00194082 r 5' 63073 EMBV3_13964 TAAGGCATCACTTGGACAGCATACAAATAGCACAAGCAGAAACTTCAAGCCCACATGCAG Gene BVT0102_344073 + 0 NULL GK000001.2:65463008-65541497 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003569 TCONS_00003570 1 XLOC_000883 Coding TCONS_00003570 XLOC_000883 Coding Coding GPR156 1:65539785-65648727 j TSS1830 4585 1 TCONS_00003570_2 808 0.0338058887677208 10 0.958004791584436 0.000297192118146844 6.50175270991365e-09 5.33850749897267e-08 2.39445788447993e-05 0.000140440966935585 8.41555170296553e-05 1.54379660336952e-17 0.000103574554067862 1.14648719579701e-08 1.688933035831e-05 5.76906791609433e-12 9.99466343616426e-12 3.88715843040052e-06 2.12401076831387e-05 2.32814536114856e-15 0 0 0 0.000168124876930995 0.000550686294446076 0.000125306215197055 0 0 3.6248771941244e-06 0.000157814389834896 0.000238172162196898 0.00010097103815668 3.4519835139985e-05 7.40255742574237e-06 0 XM_005201415.1 GPR156 PREDICTED: Bos taurus G protein-coupled receptor 156 (GPR156), 0.0 8266 100.00 0.999345692475463 XM_005247165.1 GPR156 PREDICTED: Homo sapiens G protein-coupled receptor 156 (GPR156), 0.0 3470 77.56 0.938276990185387 TCONS_00003570_2 sp|Q8NFN8|GP156_HUMAN GP156_HUMAN Probable G-protein coupled receptor 156; 0.0 1126 77.60 0.998762376237624 1 coding 0 0 0 0 0.0710582405363838 0.647349412722942 0.0383075879013492 0.421411030268365 CCGCGAACCCGCGAGAGACCCGGGCACCGCCGGCGTTCTGCCGCCCAGCCGCGGGCCTGGCGCTCCTCGGCGGTCCAGGACCTGGTGAGGACCTGTGTGAGAGTACTTGGAGCAGTGACTGCCATCTGGTGGCAAGCTAGAATCATCGCTTTGTGTGACCTAATGGTTACTAAGATGTCCACTCTTCACTCATGTGGTCTGCACTGGCAGCAAGGGACCAGGAGAGCCTGGAAGGTGTCTGATGTAGGAGCCTAGTGAAATAACTCTGTGCTTCCACCTGAATGGATTGTTCATCCCAGATTCTGAGCCAGGATCCAGCTCCAAAATGGCGCCTCTGAAGGAAAGATTTGAGTTGCTGTTGTGTTTTAGTCAAAGATCTGCTGGTTACCTACCAGTGGGTCACCAAGACTGTGAATAGGCACATACCAAGAGGGGCATATGATGACATGGAGCCTGAAATAAACTGCTCTGAATTGTGTGACGGTTTTTCTGGTCAGGAGCTGGAACGTAGACCCCTTCATGATCTCTGCAGAACTACAATTACCTCTTCCCACCACAGCAGTAAGACCATTTCTTCATTGTCTCCTGCCCTTTTGGGTATTGTTTGGACTTTCCTAAGCTGTGGACTTCTCCTCATAGCCTTCTTTCTTGGCTTCACAATTCGCTGCAGGAAGAACAGGATTGTGAAGATGTCCAGTCCCAATCTGAACATTGTGACCTTATTGGGCAGTTGTCTGACTTACAGTAGTGCTTACCTCTTTGGGATTCACAATCAAGGTGCTTTAGTGGGAAGCTCAATGGAAAGTCTCATTCAGATAAGACTCTCCATGTTGTGCATTGGAACCTCCCTGGTGTTTGGCCCCATTCTTGGGAAGAGTTGGCGACTCTACAAGGTGTTCACCCAGAGGGTTCCGGACAAGAGAGTGATAATCAAAGACCTGCAGCTTCTGGGGTTGGTGGCAGCCCTGGTGATAGCTGATGTGATCCTGCTCATGACTTGGGTGCTGACTGATCCCATCCAATGTCTTCAGATTCTCGGTGTCAGTATGACGGTGACAGGGAGAGACGTGTCCTGCTCTCTGACCAGCACACACTTCTGTGCTTCCCGGTACTCCGATGTCTGGATTGCTCTCATTTTGGGATGCAAGGGCCTGCTGCTGCTATATGGGGCCTACCTGGCTGGCCTGACTGACCACGTCAGCTCTCCTCCTGTAAATCAGTCTTTAACCATCATGGTTGGGGTCAACCTCGTGGTACTGGCTGCTGGGCTGCTTTTTGTGGTCACCAGATACTTGTACTCCTGGCCCAACCTGGTCTTTGGACTCACGTCTGGAGGTATCTTTGTTTGCACAACCACAATCAACTGCTTCATCTTCATTCCCCAGCTGAAGCAATGGAAGGCATTTGAAGAGGAAAACCAAACAATCAGACGCATGGCCAAATATTTCAGCACTCCCAGCAAAAGCTTGCACACCCAGTATGGTGAGGAGCAGAATTGCCACATTAGAGGAGAGAAAAACTCCATGGAGAGACTCCTCACAGAAAAAAATGCTGTGATTGAAAGCCTCCAAGAACAAGTAAACAATGCCAGAGAGAAGCTGGTGAGACTGATGTCAGCAGGGTGCTCCTCTGACCTCCCAGAGGAGGCTGTGCCACCTGCCTCTTCCCACCACAAGGACATCCTGGCCACAGCCTCTGCCCATAGCCTGGCACCTCAAGGGCCTTCAGAATGTCTCTCTGACTCTCAGAATGATACCAGTGCGGCCACCCAGGACTCCCAGAGCACCTCAGTGCTGGCCTCAAGTGTACAAGGCCTCAGGGGGCCTGTGAAGGATACCAGCCCCTCCACAGGGCAGAAGAAGAAAATTTCTGACTTGAAAGACCTTTCTAATCCTTTACATTTGGGCTGCAGCCAGAAGCCATGGGCTGAGCAAAGCCAGACTGCAGAAAGAAGAGACCAAGTACCCATGGCCCTCCACCAGTGTCTCATGCAAAGTGAAGAAGGCTCTGTTCCCCAGAGACACGGGCAGGTAGAGAACTCAGAGGGGTCCCCAGAGCAACTGGGGTCAAGAGTCAATTCAGTGATCAGGGAGAAACTTCAGGAAGTCCTCCAAGATCTGGGCCTGGGCCCTAGAGCTCCCCTCCCCTCTTCCTTGTCTTGTCCCCAGCAGCCCTGGAAGAGCATCACTGCCCACAGCCCCCAGAAGGTGCCCCTCTCCAAGGAGCCGGGCTTCAGCCCGTCCATGGTGAGGAGAAGGAGGGCGGCACAGCGGGCTCGCTCACACTTTCTAGGCGCTGTACCCTCCTATGTGGGGCATCGGGTAAACAGGGCCATTTCTGGGCAAAATGTACAGGACAGCCCCTGCCTGGACCCCCAAACTGCTGATCCCAGGGTAGCAAGACCCTCTTCTGGGAATCCTTTAGTACTCCCTGCTCCTCAAGGCAAGCCAGGCGCCCTAGAGGGCCACACACAGCGCCAGGCAGAGCCCCGGGGAGCCGAACGGAGCCTCGAATCCTTTCCCCAAAAGTCTTCCGGTTCTGGCCGGAAGCTGTGTCCCGCTGCCCCACGCCCATCCAGGGCCTCCCCCGACCTGCCTGGGCAGCGGCAGCCCCCAGGGTCCCCAGGCTGCCCCTCCCTGTCTTCTCCGAGTAGCTACCTTGACACCGAATCCAGCAGCTCAGACGAGCTCTTCTGCCCCTGCCACCGGCCCTACTGCGAGATCTGCTTCCAGAGCTCCTCTGACTCCAGTGACAGTGGCTCGTCAGATACCGACCCTGAGCCTGCGGGGGCGCTGGCTTCCTGGGAAAAGCTGTGGGCCCGCTCGAAGCCTATCGTGAACTTCAAAGATGATTTGAAACCCACACTGGTGTGAACAGCAGAGCAAGTCTGGATCTAGGGCTCTGTCGGGATAAGCCATAGCGTGGCCCGCTGTGGCCTTCAGGGAACAGACCAGTGCCCTTTCCGCATCCTTGCGCTCATTTGAGCACCATGGTACCTTGAGCACTTCCTGATATACACAAAGAGGGATATTGCCTGTTTTGTTACTACCTCACAGCATTCCTGTAAGAGACTCCAGCTGAGTGCCCATAAAAGATACCCTTTAGATTAAAAGGTGCTAAATGAGCACAAAGGGTCTTCTGTTCTGGTCAGCCTGTAATGTACAAAACTCTATATATACCAGATGGATGGCTGGGTGGACAGACAGATGGAGAAGTGGAAAGAAAATTCTTGCAGAACCAGAGTTGTGGACTGTAATTCATCAAATTGGGTTTTTGGTGGCCAACCTGCTAGGAAAATATCTCCTATGGACTTGGTGGTCCACTCTCGGCAGGGGGTGGTTTGTTTCTGCTCAAGTTTGTGAACAGCACCACCTCTCAGTCCTAGCTTCCAGTCAGACTCATCTCAGAGCCACCTGTGCGTCTCTATTTTGTGTTCATGTCCTCACACCATTGTGGCACCTCACCACCATTGATGAGACAGGCAGGCAGCCCGGATCTCTCTCCTGGGCTCGGATGGCACCTGAGGTACTGGTGCCATCGGATGGCACCCCCCTTCTTTGACCCTGCCAGTGGTGCAGTTTTGTGGTAGTGGGAAGTATGTATTGGCAATCCCTGTTGAGGTTGGAGAGGCCCTATTGGTCAAGAGGGTGCCAGCTGGGCCAACATGACCACTGATGGCTACATTGACCTGGAAATAGAAAACAGGAAAATAGAAAGGAAGAAATGGGGAAGATAAGAAAAAAAAACCAGATTTTGCACATTTACCTTGAGTCTAGCATGGCTGGACTCAGTAATTACTGGTGATAACCCCGTGAAGTAGGTACTCTCATCCCCATTTTACAGGTGGGGATTATGGGGCTTAAGAGGATGGAGGTGGCTTCCACAGCATCACACTGCTGGAGAGGGGCCCATGTGGGAGTTGGCCACAGCTCACAGGATTCCAAGTGCATACACTTCCCTGGGGCACATCTCTTCACTTGTTCCTCTGGGAGTGGCAGGCAGAGTGTGGCAGGCTGGACAGCAAAGGCAGTGTGGGAAGCTGCGGTGTGCTCAACCTGCAGTCCAGGATAACAAAACTGGGCTCCTCGCCTCAGTAAGCAGCCCGTCACTGCCTCACTGCCTTGGGAGCCCACCCACACCTCCCACAGCAGCCGGGGAGCTGGTGAGAGATAAGTACCAGGGTCTTGTCGGCTGCCAGAGCCACAGAGAAAACACAGCTGGGTCCACTTCTTTTGTTGCTGAGCTAGTTGTTTACAGGCTATTCCCTGCCTCTAACCTGGGTGTGTATCCGCATGTGTATACATGCTTATGTGCAGGAGCATGGGCCTAATTAGATACGTCCAGAGGGGAGCATTTGGCTCTAAATGTCTTGCAGAAGATGTTATCATGGACTCTCGTTGGCTGCTGACACCTTGTGAGTCTCCAAACACTGGACCAGGAGGCCCTCCTGGCAACACAGCTTCTTCTGTTGTCCACTTTTAAATACAAATATCATAATTTATTCTGCATGTGGGCTTGAAGTTTCTGCTTGTGCTATTTGTATGCTGTCCAAGTGATGCCTTAATAAAAGAAATGGCTCTCAAGG EMBV3_16281 TGGAGAACAAAGAGGAGAAGGTGTATTCATGGCTGCTCGCTGTTTCTGGGATGCTGACAC Gene GeneID:504554|TCTEX1D2:NM_001166555:29_cdna Constitutive 1 NULL GeneID:504554 1 GENE TCTEX1D2 NULL Tctex1 domain containing 2 EMBV3_39568 AGTGGAGGGTAGTACTTTTGAGCCACCTGGGGACTACAAGGAATAATTTCGAAGGGAAAA Variant GeneID:507986|MOCS2:NM_001014867:64_cdna 325^452 5 EMBV3_26412 GeneID:507986 20 GENE MOCS2 NULL molybdenum cofactor synthesis 2 EMBV3_00407 TCCCCTTTAGCAGGACGCCTTCAGATTCAGATGCGCTGATCAAACCCACACTAGCGTCAT Gene BVT0102_092870 + 0 NULL GK000022.2:16691160-16694669 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128092 TCONS_00126315 TCONS_00128091 TCONS_00126316 TCONS_00128094 TCONS_00126314 2 XLOC_077826 XLOC_077410 Coding TCONS_00128094 XLOC_077826 NonCoding Coding TATDN2 22:16690504-16694467 o TSS95668 3349 2 TCONS_00128094_5 114 0.439235592714243 3 0.15547703180212 6.72290383632485e-18 0.000588486094832221 0.000759495644795861 0.00576222344251924 0.00111478200047408 0.000364465102372016 0.000482244841831289 4.47640949904075e-07 0.000930332194371685 1.17045817783179e-111 0 0 7.5850315410197e-65 2.86933661464195e-05 0.000144600431675914 0 0 0 0.000301625301739897 9.02790858460597e-05 0.000425050790514805 4.0143494207477e-159 0 0 0.000683855345473412 0.00108266372820082 0.00111557077737547 0 0 0 XM_588043.6 TATDN2 PREDICTED: Bos taurus TatD DNase domain containing 2 (TATDN2), 0.0 2001 99.91 0.331740818154673 NM_014760.3 TATDN2 Homo sapiens TatD DNase domain containing 2 (TATDN2), mRNA. 1e-126 459 75.41 0.199163929531203 0 noncoding 0 0 1 0 -2.69107466254642 0.000925905557147053 -0.390478135905247 0.00252422956151978 CCAGATGATATGGAGAAGTTTCTCTGCATCCATGAGTGGTATAGTGAGGTAGCTAAGAGGTTGGGCGCTGGCTCTAAAATGTTGGCTAATAGTTGGATGATCTTGGGCCAAATTAGGGAGTTACTTTGAGCTTCTGTTTCCTCATCTGTACAATGGGGGAGGATAAAAAGTACCAGTTTCATAGGTTTGATAGTAAAAGGGCATTCAACAGCCCCCCAGCAAGGTCAGCTTTGTACTAGTACATAAGAAATCTGAGTGGACTCCAGCCCAGGTGGACAGTGATTTCTACTGACACCTTTGTCTTAAGCTCTGGTAGCTGTTAGGATTCAACTAGAGTCTGTGTTATGTACCCCAAAAAGGACCTGAGATGTGGTAAGCACCTTCAAATTATGAACAGTATGTTTCCAAAGCATTTTGAGCAATAGAGGACAGTTGCCGATTGGGTAATGTTTCCATATGACCCAGAAATTCCACTCCTATGTATCTAAGAAATGAAAACATGTTCATACAAAAACTTGCACCCCAGTTTTTATAACAGCAATATCCATGATAGCCAAAAGGTAGAAACAACCCAAATGCCCCATCAACAGAATGTGTGGCATATGCATACAATGGAATTGTATTCAACCATAAAACATGAAGTACTGATGCAACATGGGTGAACTGGAAAAGATAATGCTGCTACTGCTAAGTCGCTTCAGTTGTGTCCGACTCTGTGCAACCCCATAGACGGCAGTCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGACAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTCAGTTGTGTCCGACTCTGTGCGACCCCATAGACGGCAGTCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTTAAAGTGAAATTGCTCAGTCGTGTCCGACTCTTAGTGACCCCATGGACTTCAGCCCACCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCAAAAGATAATGCTAAGAGAAGCCAAACATATATACTTCCATTTTTGTGAAATGTCCAGAACAGGCAAATTCAGAGAGACAGAAATTAGGAGTGTGTGTATGGGGGAGCAGGGAGTGGTTTGGGGAGGGAAGTGGTAATGATCACAAGATTTTAGAGTGATGAAATGTTCCAAAATTAGATTATGGTGATGGTTGCACAACTTTAAATATACTAAAATATAATAGAATTATATATTGGTCAACTTTATGGTATGTAAATTATATCTCAATAAAATTATTAGAAGCACACAGAGTGGTTACTCACAGACATAAAAAATTTTGTATCTTGAGGCTCCACTTCTCATTTTTTACTACACACAGTATTTTCATTTATTCTGGATCCTGTTTTTTCTTGTCTTTCTTGGCTATTCTTCCTCAACAGTATATTTGGAGCACTTCCTTCTTTTTGCCTGCTATTCCATTGTATGGTTATTCTGTAATTTACGCAACTAACGTCACTTGCTGGATACTGAGATTGTTTTCATTCTTCCTGCAACCAAACCTTCCAAACAGGTTACATCAGTATAAGCTCAGTTGGTGATGTATGGGAGTGCATTTCTGCACATCCTCAACTACAGAGAATATCATCATGCTTTTTGATCACTGCTAACCTAATGGGTGAAAACATAATTTTATTTGTACTCATTAAATAATTCAAAATGGAGCCATTTTTTCATATGGCAACATGAAATTTAATCAATTTTGTTATTTGTTACATTCATCAATTCATTTCCTTTGCCCACTTAATTATCTTATTGTCAAAGTTTTTACATAGTAAGGACATGAGCCCCTTGCTATGTGTTGCAAACATCTTTCCAAGTTTGTACCTTGTTTTTTAACTTTGGTGTTTGTTTGCCAGAGGATAGTTTACGTTTTTGTGTAGTCTTTTGCCCCCCCCCACCCCTCACCCCGTAGTTTCTGAGTCCAAATCCGTCAGTTTCTGGGTTTGTCACTGGGTCTCTGAACCAGTTTCCTGCTCTGTAAATGGAGTGATGACGCTAGTGTGGGTTTGATCAGCGCATCTGAATCTGAAGGCGTCCTGCTAAAGGGGACAGCGCTGAGCAGCAGGGAACAGCCGCGGGAGCACGGATCAGTCGGTGCCCCATTCCTCCACTATCCGCAAGCCTGAGGAACTGCGACCCCACCTTTGCTTCCAGCTCTACGAGCTAACGTGTGTGGCTCCGCCCGTCTAGCTTCCGACCAATGGACGAGTTTCGTAAGGCGAAGGGTTCCGCCTCCAGACTTACTGACCAACAGAGGGGCTCCGTCTTGCCCGGAGCTCCGCCCCTTGTTGATCTGAGCAATGGGCGCCCTCTCTTCAGCGCAGGACCCGCCCTCGCCGCACGCCGGGCTGCGGGCCGTACAACTCGTTCCGGTAGGCGGGTCCAGCAGAGGCCGGTGTGGTCCCAGCTCCGGCGGAGGCAGGGCCGGCCCCGCAGGATTGGGGCGGACGGCAAGCGGGCGGCCAGGGCAGGGCGTCAGGTTGCGGAGCCGACGTCCGGGGGCGAGAGCAGGAACGGGATACGGGCAGACCCGGGGATATTCTGAGCAGGCGGACCCGGGCGCCGCCGGCTGAGCGGCGGCTCGCCCCCTTCCGGCCCAGGGCTGGTCGGCTGGGCCTCGGGGGCAGGGCGGGCTGCGTGCCGGTCTGGTACTGCTCTGCGGCCCGCGCTCGGCGTTCCGGGCCTCCTGGCCGCGGGCCCGCCCAGGGGCTGCAGGACTGGCCTCCAAGTGTGGACCTAACAGCGCCCTGTAGCCGTTTGAAGCGCTGACATCTGCGAAGGGCTTTGTATTGCAAACTCAGTCAGAGCGCGTCGTAGTTCCGGAAGCGCTTTGACATCCCCGAAGTAGCGCTGTGCAAACTGAAGCTCTTGGTAATCGCGGAAGCACGTTGTGGGCTCGGAACCTAATCGAAGGAAACCTTTAGTAAATCCTGGGACCTTCTGGACTTCGAAGCGGTTTGCTATCGCCGACATAGGAAGCGCTTTAGCGTCTCTGAAACCTTGAGAACTGTGATGGGCAGTGGAAAAGGGGAAAGGTGCCCATGGCGTCGGAGCGGCGCAAGGTCAAGTACCACTGGAGCAGCACTTCGGATCGGAGTTCCCGCAAGCGCAGCTGCCTCCGGGAGCCCAGTGATGTGGCCCCCTCCAGCCGCCCAGCTCACAGCTCTGTGTCGCGTTCAGGAGGGGCCAGCAGCCCCAAGCGCCTTAAAATTCTTG TCONS_00128093 TCONS_00128091 TCONS_00128092 s 3' 217 TCONS_00128093 TCONS_00128091 s 5' 0 EMBV3_36669 CAGACTGCCTGTGCCCTGTTTTGCTACTTCACTGCCACGGGATGATCTTAGTACTGTATC Gene BVV0102_119778 + 0 NULL GK000019.2:48406634-48414991 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20997 ATCAATTTCCTAGAGTAAGCATAAGGAGCTGCAGATCAGGACACAAAGGTGCCTGGCAGG Gene BVT0102_089758 - 1 EMBV3_14058 GK000008.2:111995268-112057390 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229103 TCONS_00229106 TCONS_00229101 TCONS_00229102 TCONS_00229104 TCONS_00229107 TCONS_00229105 1 XLOC_138654 Coding TCONS_00229102 XLOC_138654 Coding Coding FBXW2 8:112053261-112089464 j TSS170634 5361 1 TCONS_00229102_1 170 0.0947584405894423 3 0.85199712723054 4.939106775747e-05 9.30887247475904e-05 0.000171275199274463 4.22839572804121e-12 0.000190271729662246 5.27885785031041e-10 9.65296287451735e-05 3.24131958361015e-05 7.6940643805165e-11 4.6425478444562e-25 1.39965628061463e-05 2.53552844199379e-06 1.29906423154139e-09 2.22026042929083e-09 1.98326578352424e-12 0.00186276703376137 7.80740587583543e-06 0.000874006604754613 0.000300012113946664 7.0723139839159e-05 4.8137936653522e-09 3.79338844578451e-05 0.00100094119571269 0.00132669116175111 0.000126953733141216 0.000202591432388055 9.27091139184084e-05 0.000232527448120941 0.000129360187512051 1.69444409744243e-07 NM_001076974.1 FBXW2 Bos taurus F-box and WD repeat domain containing 2 (FBXW2), mRNA. 0.0 1164 99.54 0.121619100914009 XM_005251908.1 FBXW2 PREDICTED: Homo sapiens F-box and WD repeat domain containing 2 (FBXW2), transcript variant X1, mRNA. 0.0 1180 71.51 0.458683081514643 TCONS_00229102_1 sp|Q58D00|FBXW2_BOVIN FBXW2_BOVIN F-box/WD repeat-containing protein 2; 1e-113 335 98.81 0.982352941176471 2 coding 1 1 1 1 0.0134896564578129 0.942118492943203 0.016284489914944 0.769088571548842 CTCTGGCGGCCCGAGCGCGCCTAGTTGGTGTGAGCCCGGCGCGAGGTCCCGGGCCCCGGGGCGCTCGCTCAGGTAAATTTTTCCATAACCTTATGGAGAGAAAGGACTTTGAGACATGGCTTGATAACATTTCTGTTACATTTCTTTCTCTGACGGACTTGCAGAAAAATGAAACTCTGGATCACCTGATTAGTCTGAGTGGGGCAGTCCAGCTCAGACACCTCTCCAATAACCTGGAGACTCTGCTCAAGCGGGACTTCCTCAAACTCCTTCCCCTGGAGCTCAGTTTTTATTTGTTAAAATGGCTCGACCCTCAGACGCTACTCACATGCTGCCTCGTCTCTAAACAGTGGAATAAGGTGATAAGTGCCTGCACGGAGGTGTGGCAGACCGCCTGTAAAAGTCTGGGCTGGCAGATAGATGATTCTGTTCAGGACGCTTTGCACTGGAAGAAGGTTTATTTGAAGGCTATTCTGAGAATGAAGCAACTGGAGGACCATGAAGCCTTTGAGACCTCATCTTTAATTGGACACAGTGCCAGAGTGTATGCACTTTACTACAAAGATGGACTTCTGTGTACAGGGTCATCAAGACTCCTGAGATAGCAAACCTGGCCTTGCTTGGCTTTGGAGACATCTTTGCCCTGCTGTTTGACAACCGCTACCTGTATATCCTGGACTTGCGGACAGAGAGCCTGATTAGCCGCTGGCCTCTCCCCGAGTACAGGAAATCCAAGAGGGGCTCCAGCTTCCTGGCAGGCGAAGCATCCTGGCTGAACGGACTGGATGGGCACAACGACACGGGCTTGGTCTTTGCCACCAGCATGCCCGACCACAGCATCCACCTGGTGTTGTGGAAGGAGCACGGCTGACACCGTGAACCGCTCCGCCCGCTGACTTCGGGTGCCGGGGCTGCGGGTTTGGGGTGCAGCCTCTGTGGTAGCCGACTGCATGAACCAAAGTTCTCACCTCATGGTATCATCGCGCAGTGCACAATCATGTATCTGTTTGCGGGGGCCAGGGCTCGGGGCGGGGGCTCGTTCTGTTGACACACAGCACAGCAGGCTGGCGGGGTGCACCGCTGGTCCATTTGTCCTTAGTTTGTGGGTCAGTGTGAGAGGCTGCATCTGGGGTTCATCTTTCTTGAATATTGATTTTGAGTAAAGAAATATAAGTGGCTCATTAATCTGCTAATTGGTTGCCTATAAAAACACAGTCTGTGATTAAAGCTTTTTACCATTGCCTTTTTCTCTTTTGAAATTGAAGCAAAGGTGCTATGATGTTGTTACAGCAACTTTTCTCACGCGGGCTCAGCGTTTACAATAGCCCGTGTTGTAGAGACCACCAAGTCCTGTGACATTCATGCTCTCCGCCAACACCAGTTCTAAAGAGAATGTGTCTGCAGTGCAAATGCAGTTCTATAGATTGATGGTTTGTGACACACTTTAAACCCTAGTTCTTGTCAGAGCCAGGATTGGCCATGTCTGAGCTGCACAAAGTTCCGTAGTCTTTGTTTCTGTGGAACAGGCTGGCGCCGGGTCACCTGCCACCGCCATGACTGCGTAGCGGTGCCATGGTGCAGTGGAAGGCGCCAGGCTGGCAGACCGAACCCTGGCCGTGCTACCCAGGAACCCTCAGCCCAGGAGTGTCGTTCTTGGCCCCGTTTCCTGTCTGTATAGCTAGTTGTTAGGCTGTCGTTTTATTTCTGGGATTCTCTCTGGTCCTGTGTCTGCCAAGCTGTGCAGAAGTTGGTGCTTCAGTTTTGTCTGATTGCTAATTCGTTGTTTCTTGGCATTTGGAGATCATCTGCAAATGAAATCACTGATACAAAGTTGTCATCTCTAAGGAAATCAAACATGCAAAAAAAGAATGGATAAAAGGGAATGTGGAAAATGTTAACACAGTCCACTTTAAAAAATGTAAGCAGTTGGTGGAAGAAGTGCTGAGAGGAGTCGGGGTTCTCTGAAGAAGCAGGGTGCCAGATCAGAGAGAAAGACCCCTGACCCTGACTCTCCTTCCTCCTCTGTCTCTATCTTGACATGTAGCCTCAGGCAGGCTAACTTTCTGTTGAAAAGGAAGGAATTGCGCTAGATGAGGGTTTGCAGACGTGCAGGCCTGGGGAGCCATGCAGATAGCGTGAGTGAGCGCAGCGCTCTGGGCAGGAAGGCTCTGTACCGAGGGACGCGCGTCTGCAGGGCAGTTTCAGAGCCCTGAGCGTCAGGCAGGAATAAGCCCGGTATTGGCGCAGGTCTTCTGACTTTTCAGCCGGAGGTAGGCATCCAGAACTGTATTTGTAATTCCCTAATTTTAAAGATGTGGACAGTGGTTTGGAGTAAAATACAGTGGGCCAGTAATGCAGCGAGTCTTCAGGCTGCCAGCTCCATTCCCCACCTTCTCGTTCCTGCAGACTAGACGATGGCTGTGATTCAGCAGGGGCAGTGTTTTAATGTAATTGTCACAAACGTTAGGGAGGAAGTCGAGGGAACAAGTGTTGGGAAGAATTCAGGAGTTCCCCATTGTGTGACAGAGGATTGGGGGGGGCGGGGCGGGGGTTGTTTCATTCACAGACCCACAGGAAAGTATTAATAGTTAGAAGATGAATTTAAGAGCTGGAACCTGAGTGGGAGGCTCTGCCTGGGAATATGAGGGATTCCTTCTTCTTGTTAATTTTGATATTAACCCATTTTTCAGGTAGGAAAAAGGTTGCTGGCAGAGCTGAGAATGATTCAAAGTACAGGGGGGACGCTGCTCTCCCAAATCCTATCACCCTAGAGCCTGACAACGGACCTCCGAATGCTGCAAAGTCAGGGTTTTAGAGAATTGAGTTGGTTCCAAGGGTGCATTTAGGTAATATCCATGCCGAGACTCTGAGGAAATCGGGTGAAAGAACACGATCTTCACGCCCCACATCCATCTCATGTTGATTTCTGTGGGTGAGCGCTGCTTGGTGCTTTTAAGAAATGGGACTAGGTTCAAAGCTGGACTCTATTGCTCAGGAACCTCAGGAGGCTTTGGGCCACGGTGAGGGGAAATGACTTTTCTCATTTCATCCACCTGGAGCTTGGAACAGAGATGACAGATCTGATGATCACCCGTAGCCCCACCTCACCTTCCAACATCCATACACTTGCTTTAAAGAGCACGCGGTTACATAGTCATCTGTGGGGAAAACTTGGAAATGACAGCCCTGAAGCTTGTATGGCACGTCTCCTTCCACTCTTCAGTGGTGAATACCAAAGTTACCATCAAGGCAGCGCAGTGCTTGGAGTCCTGCCTTCACCCCTCTTCACATAGTATTGCGGACCAGAGTCAAAGCTGTGGTTTTCCAGTAGTCACGTACAGATGTGAGAGTCGGGCCAGAAATAAGGCTGAGCACCGGAGAACCGATGCTTTTGAATTGTGGTGAGGGAGAAGACTCTTGAAGTCCCTTGGATAGCAAGGAGATACGTCAATCCTAAAGGAAATCAACCCTGAATATTCATTGGAAAGACTGATGCTGAAGCTGAGGCTCCAATACTTTGGCCACCCAATGCAAAGAGGCAACTCGTTAAGAGAAGACCCTGATGTTGAGAAAGATTGAAGGCAAAAGGAAAAGGGGGCTGAAGAGATAGTTTGATAGCCTCACTAACTCAGTGGACATGAGTTTGAGCAAACTCTGGGAGATAGTGGAGGACAGAGGAACCTGGTGTACTGCAGTCCGTGGCGTGGCAAAGAGGTGGACACGACTTAGCTACTGAACAACAGCAGCTTCTATAAAAATGGAAAACTGACTCATCCTTTGGAAAAAAGTAAAGCGAGGTGGGGAGTTGGTGAGCGCAGTGGACGGGGGACTCAGGCTCCTCTCACAGAGTTGGGCGCTCTTTCCCGCGCACCGACGTCTGCTTCCGTAGCGCGGACGCTAGGGCTTTGCCTTTACCTCTTCTCTGGAGTATTCTCTTTTCTGAAACATTCTCAGGTCATGAGCAGATAGACTCCGTCTTTCTTCACGAGCTTTGGATTTCTCCAGTGACCCTAGTGTGGTGGAAGGTGGGGTGGCTCTCTGCTCGGGTCTGTGGAGGGACACATAAGAACCTGGGGCTCTGGGGGGAGGATGGGGCCCGAGAGAGCTGAGGGGGTGTGAGGTCTCAGCAGGCTTGGTTCCCATTCCAAAGGAAACTGGTTCCCCCAGCAGGCCCCATTATTTGAAAACTGTAAGTGATGTCACGGCTGGGTTTCACCTGACCTCTTAGACCCATCGGAGAAGTGGGAAGAAAGACTTCCTCCAGGGGAGGGGCTCGACTTTGAACAAGTCCCACAGGAAGTGCCCATGTTTGAATGGCTTTTAAGTGGGAGAAGTGGAATACTGCTGTTGGGTTTTAAGGTGTGCACCTCCTTTTTCATAGTTCAAAGTTGCTCTGTTCTGGCCATTGGAAATGCTCAGGAAAACATGAGTGAGGATTACATGATCATGCCAGTATTTGCTCTCAGGAGAATGTTTACTGCTCTGCATTTGTAAAACATCTTAGGGAGAAAAGAAATAACTTCTGCAAACAGTATTACGTTAGTCATGAAGAAATTGTTTCTGTCAGGTGAGGCGTTTCAACTGAGCAGAAGTGGCTGAGGAGAGTGGAGCCCGGCTTGACACATTACTTTGGCCAAACCCAGCCAGCGGCCTGAAGCCGTGGTCATAGCCCCGGCTTCCGGGGTGCCTAGAGACGGGTCTCCCCACCGTTCCGCTCCTAGCTCTCCGCGCCTCCTCGTCTGGGCCTCTGCCGGGCCCTGGTGTCCCAACCGCTTGCCAGTGTTTGTAGGGAAGTGTGTAGTCAGACTGCTGTCCCGGGAGGCAGCCTGGGCCAGGGCGCACTCTCCCCTTTGCCTTCCACCCATAGGGTTGTTGGCACAGGGGAGAGGCCCCAGGTCCATCCCCTGGACACAGCCTTCCTGCCTGCTTATGCTGGTGCTTGCCAAGATGTTTACGATGACCAAGACCCTCTTGAGAATTCTGCAGTCCCTAGATAGAGTGTCTGACGGAGGGGACAGGTTAGCACTCTTGACAGAAATGCCTGCCAGGCACCTTTGTGTCCTGATCTGCAGCTCCTTATGCTTACTCTAGGAAATTGATTTCAGGATAAATCATCAAATGGATTACCAGTTATCTTTGCACCATTCCTTCAGCCTGATCGGGCTGAATGACCACGCTCGGTGCAAAAAGGGGTTTTGCTCTCAAGTTGTTTGAATGTGTTTCCAGTCTCCCCTGTTGCGTACAACTTGTATTACAGTCTTGACTAGTGTGAACATACTTAATGATTGCAGCTTAAGAAACCCAGCTAACTTCTACTCTTCATGAATGTACTCAAATAAAAATGTGTTTTTGCATATTTAA EMBV3_33283 AAGGGTCCACTCCGACCCACAGCCCCTGCTCTAGATATGTCTTGTATAGGCTGTTTTGAA Gene GeneID:539901|RNF40:XM_002698066:42_cdna Constitutive 0 NULL GeneID:539901 25 GENE RNF40 NULL ring finger protein 40 EMBV3_40617 TCCAGACTGAAGACTTCGCGGCTGCGAAGACCAACTCCAGCACGTCCCCGAGCATGGAGA Gene GeneID:526572|APC2:XM_002689175:226_cdna Constitutive 0 NULL GeneID:526572 7 GENE APC2 NULL adenomatosis polyposis coli 2 EMBV3_19609 CATGGGCGTCATTCTCTCATATCCACTTGTCCATGGGACTCTTGCTGCCAAAAATGGTGG Gene GeneID:511596|NDP:NM_001046090:22_cdna UTR3_Alt 2 NULL GeneID:511596 X GENE NDP MGC137650 Norrie disease (pseudoglioma) EMBV3_35829 TGAGAGGTAAATGCGGCGATCGTGTCTCTAGGACGAATTGGTGGCTCTGATGCACTCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19831 GCTCTGTAGACCACCAAGTGGAGACAGGGCCATCCAGTGACTTGAGGAATTTACAGAATG Gene BVV0102_064521 + 0 NULL GK000010.2:104003663-104004261 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015570 TCONS_00015569 TCONS_00015568 TCONS_00015572 TCONS_00015571 1 XLOC_008512 Coding TCONS_00015569 XLOC_008512 Coding Coding EIF3J 10:103984575-104004352 j TSS10965 2559 1 TCONS_00015569_1 228 8 0.871005258899676 0.000943200000147391 0.000831629806842864 0.000267801215399221 6.80843671546656e-08 0.000207610562002068 0.000239335611971325 0.000400613592905237 9.04111963051423e-09 0.000364206419775575 1.5140525256306e-06 0.000241789279798297 4.2098527163624e-05 2.6780238532128e-06 2.08633109061684e-12 5.77347401894327e-05 0.0026014389376875 0.00124389635909387 0.00322757911384582 0.000271767722366821 0.000611333037250427 0.000175656950989994 0.00125436947965046 0.000253302547199706 0.0011185111122396 0.000581697443718029 0.000151765117900966 6.82676772398765e-06 0.000464306596142766 0.000150402494506913 0.00084494096473837 NM_001076143.1 EIF3J Bos taurus eukaryotic translation initiation factor 3, subunit J (EIF3J), mRNA. 0.0 3104 99.71 0.676826885502149 NM_003758.3 EIF3J Homo sapiens eukaryotic translation initiation factor 3, subunit J (EIF3J), transcript variant 1, mRNA. 0.0 2964 86.22 0.980070339976553 TCONS_00015569_1 sp|Q66JS6|EI3JB_MOUSE EI3JB_MOUSE Eukaryotic translation initiation factor 3 subunit J-B; 6e-112 326 93.69 0.964912280701754 1 coding 1 0 1 1 -1.23316430983205 0.0182940265023387 0.108732313515739 0.134424337221093 CCGCGCCCCACGCCCCTTCCGGCCGCCAGGGGGCGGGGCCTCAGCGTTGAGTCAGCCGCGGTCCCAGCGTTCCCCGCGCGGGCGACGAGCGCGGATCCGGTGACTCACCTCCGCCGCGCTAACTCTCCCCGGTCTTCCCTCACACACGCTCACGCCCGGCTCGATATGGCGGCGGCGGCGGCTGGGGACTCCGACTCCTGGGACGCGGACACGTTCTCAGTGGAAGACCCGGTGCGGAAGGTGGGGGGCGGCGGCACTGCCGGCGGGGACCGCTGGGAGGGCGAGGACGAGGACGAGGACGTCAAGGATAACTGGGATGATGATGATGATGAGAAAAAAGAAGAAGCAGAAGTAAAACCAGAAGTAAAAATTTCAGAAAAGAAAAAAATAGCAGAGAAAATAAAAGAGAAAGAACGGCAGCAGAAGAAAAGGCAAGAAGAAATTAAAAAGAGATTAGAAGAACCTGAAGAACCTAAAGTGCTAACACCAGAAGAACAATTAGCAGATAAACTGCGGCTTAAGAAATTACAGGAAGAGTCTGACCTTGAATTAGCAAAAGAAACTTTTGGTGTTAATAATACAGTTTATGGAATAGACGCTATGAACCCATCCTCAAGAGATGACTTCACAGAGTTTGGAAAGTTACTAAAAGATAAAATTACACAATATGAAAAGTCACTATATTATGCCAATTTTTTGGAAGCCTTAGTTCGAGATGTTTGTATTTCATTGGAAATTGATGACTTGAAAAAGATTACCAATTCATTGACTGTACTCTGCAGTGAAAAACAGAAGCAAGAAAAGAGCAAAGCCAAAAAGAAGAAGAAAGGTGTGGTTCCCGGAGGGGACTAAAGGCCACCATGAAAGACGACCTGGCGGACTACGGGGGTTACGACGGCGGATACGCACAGGACTACGAGGACTTCATGTGACGCTTATCTTCTCCTGGCGTCTTCTTTCTGTTGCCCACAATCCCTTCAACATGTAGCACAACTTCCTTTCTTTTCAGTTCTGCCAAATGCTACAATCAGAAGTGCAGTATCTTTTGTGCTGGTTATTTAATCCCTTGACACTTAGGTGCTAATGTGCAAATGAGGGAACTTGGATCTTGTTGCCAAGGGGTTAAAATTGGGAATCTCTGTTGCTACTAAATCATAGTTTTAAAAAACAAACCTAATAATGTTGTCATTGTTGCTATCTGATTCCATAGCAGCAGTCACTAAATTGGAAACAAAGGTTGCAACATGACAAAAAAAATTGTGTAGTATTTACCAGCACCGTTCAGTAATACAGCCTTAACCATACCTCCTTGAACTACTTCATAACTTGTCGAGAAAAGCGGTCTGCTGCAAGGGCATGTGGTGTGCACCTAGTATTAAAATTGCTTTGTCTTAAGATTGAGCGTGAGGATATTAAAAATACAGTGTGGAGAAGACTGCTGATCTCAGCGAAGATACGGCGGCTGCAGAGCACTAGTTTGATAATTAAATGACCAAAACCCTCCAACTTTGAAGCTGAAGAAGGTAAACCTCTCCATCGTTGCAGTACGAGTTGTGGAATCTCTATAGACTGTATAGTCTCTATTTATCGGGCTGTTCTACTGACGGAGCTTCAGATGGGGGAGGGAAACTCCTCACCTGTTTTATTTGCCTGATGTAAGTGTCTGAGAAACAAATCTTCCTTTGTTCTCCAAGACTGCAGTGGAACAACTTTTAACAGGGTTTTGGCATTTCCTTTCCTTTATAAAACATGCTCAGCAAATTGCACCAGTTAACTACAGTTTGGTAAATTGTTATGTTAACAATTATGACATCTGCAATGTTTTATAAAGCAACTAATTTAATAAAGTCACTATTGTGAGGACTTAAATTTTGTGTTACCTCCCAAGAGATATTTTTGGAGAGTATAGAACAAAGCTCTTGGGACGAGAGTTCTATATACTGAGAAAGCTTTGTAGGTGCTTGATGAGTAGGTGCAGTTCTAGAAGAAAAGTGATTTGCAAAGTCCTTAACAGTGTCACTCTAGAGCAACAAAGGGACGGAGCTGCAGTCCTCTTATTTATTTGGAGAAATTATTTGGTTGCTTAGATACTAAGGCCTAATTAAATACCTAGAAGTATTTATTTTGGAGTAACTGAGCTTGTAACTCAGGTGATGGCTGTATGCAGAGACTGGGTGATCTTCTCTATTATATATATTCTGGTTATCAGTTTAACCAAATCTGTGCTTAGAGACTTTGTTGGAAACTGCCATGGAATCAAAAATAGGGACAGAGCAAGTATTTTAAATTTCTCTTACATAGGAGTAGGAGTCTCAATCAGAGCTCTGTAGACCACCAAGTGGAGACAGGGCCATCCAGTGACTTGAGGAATTTACAGAATGGACTCTACAGCAATAACTACAGCCAATAAAGACTGCTTCAAGGCAGCCAAGGGCTAAGGTTTCCTTAGCAGTAGTAATGACATACACTGAATTTAAAATCTATTTTATTATAGAGATCAGTTTCTAACAAATGGAAATGTATCATCTGTTCCTCAACTGTGTAAATAATATTAAATTC EMBV3_20119 TGGCTCATGGAACCATTTGGAAATCTCATGCAACCCGGGGGCCCTCTCACCAGAATACTT Gene GeneID:618086|RTP3:XM_002697093:199_cdna Constitutive 0 NULL GeneID:618086 22 GENE RTP3 NULL receptor (chemosensory) transporter protein 3 EMBV3_04353 ATTGGGCCACTGAACCGGAAACCCCAGACATGAAAGAGGAACAAAACTGGTCGCAGGAAT Gene GeneID:540995|ST6GALNAC5:XM_002686299:175_cdna Constitutive 0 NULL GeneID:540995 3 GENE ST6GALNAC5 NULL ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 EMBV3_19497 CCAGGTACCGAAGTGAGAAGGTGACAATCAGTTATGCAGAGTATATAGCTTCTCGACAGC Gene GeneID:539958|AMMECR1L:XM_002685210:77_cdna Constitutive 0 NULL GeneID:539958 2 GENE AMMECR1L NULL AMME chromosomal region gene 1-like EMBV3_28133 TCTGCAGAGAACTTTTCTCCTGATTTGAGGCCAAAGATGTAACTTATATATGTCCATTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19461 TAGCCAGATCCAAATCTCTGCCTCCCCCTTCCCAAAATAGTTCTCAGTATCTCCATGTAG Gene BVT0101_006052 + 0 NULL GK000030.2:7845822-7891627 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243696 TCONS_00243697 TCONS_00243701 TCONS_00243699 1 XLOC_150231 Coding TCONS_00243696 XLOC_150231 Coding Coding XIAP X:7810764-7850327 j TSS183292 6156 1 TCONS_00243696_3 497 0.0685510071474984 7 0.844573075173146 1.01617534680653e-05 0.00117095053528789 2.7433602497118e-06 0.000225192994671878 0.000812733479129061 9.49888838094995e-10 0.000677258300917559 0.000772666694607903 0.00192622570626568 0.000120870735994524 2.18744461341381e-08 1.31090941516018e-09 2.32043986005918e-08 2.53939018080918e-07 0.000426237177715163 1.77881706285734e-08 1.28305847747735e-07 4.11968575549087e-09 0.00113313420356323 0.00102024554618467 2.16254463183268e-07 3.82188108315677e-08 7.07658691194657e-06 4.00977440425725e-08 0.00128030451090706 3.13058701549897e-06 0.000910592978298168 8.95559458940903e-06 0.000111007600146395 8.55516792895462e-08 NM_001205592.1 XIAP Bos taurus X-linked inhibitor of apoptosis (XIAP), mRNA. 0.0 2742 100.00 0.246751137102014 NM_001204401.1 XIAP Homo sapiens X-linked inhibitor of apoptosis (XIAP), transcript 0.0 4309 88.18 0.551169590643275 TCONS_00243696_3 sp|P98170|XIAP_HUMAN XIAP_HUMAN E3 ubiquitin-protein ligase XIAP; 0.0 942 87.73 0.997987927565392 3 coding 0 0 0 0 -0.0824721867179699 0.517737433713226 -0.0236199803479406 0.856537395968038 GGGAGGGGCAGGTGGGGTAAATAGGGCTTCGTTTGTGACGGTTGCCTCCGGTAGCCTGAGGGAGTGGCCGGACCTCGGCGGAGCCGCGGGCGGGCTGGCTCAGCGCAAATCTAGGGCTGGAAGGAAAAGGTGGACAAGTCCTATTTTCAAGAGAAGATGACTTTTAACAGTTTTGAAGGATCTAAAACTTGTGTACCTGCAGACATCGATAAGGATGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTGCTAATTTTCCAAGTAGTAGTCCTGTTTCAGCATCAACGCTAGCACGAGCTGGTTTTCTGTATACTGGGGAAGGAGACACTGTGCGGTGCTTTAGTTGTCATGCAGCAGTAGATAGATGGCAATATGGAGACTCAGCAATTGGAAGACACAGGAGAGTATCCCCAAATTGCAGATTTATCAATGGCTTTTATTTTGAAAACAATGCTGCACAGCCTACATATTCTGGTGTCCAAAATGGTCAGTACAAAGCTGAAAACTACCTGGGAAACAGAAATCATTTTGTTTTAGAAAGGCCATCTGAGACTCATGCACACTATCTTTTGAGAACTGGACAGGTTGTAGATTTATCAGACACCGTATACCCAAGGAACCCTGTCATGTGTAGTGAAGAAGCTAGATTAAAGTCATTTCACAACTGGCCAGACTATGCCCACTTAACCCCAAGAGAGTTAGCTCGTGCTGGACTCTACTACACAGGTATTGATGATCAAGTACAGTGCTTTTGTTGTGGTGGGAAGTTGAAAAATTGGGAACCTTGTGATCGTGCGTGGTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGAATATTAATATGCAAAGTGAATCCTCTGTCGTGAGTTCTGATAGGAATTTCCCAAATTCAACAAATGCTCCAATAAATCCAGCCATGGCAGATTACGAAGCACGGATCATTACATTTGGGACGTGGATGTACTCCGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAGGTGAAGGTGATAAAGTACAGTGTTTTCACTGTGGAGGAGGGCTAAATGATTGGAAACCCAGTGAAGACCCTTGGGAACAACATGCTAAGTGGTTTCCAGGCTGTAAATATCTGTTAGAAGAGAAGGGAGAAGAATATGTAAACAATATTCATTTAACCCATTCAATTGAGGAGTCTCTGGGGAGAACTGTTGAAAGAGCACCATTGTTAACTGAAATAATTGATGATACAATATTCCAAAATCCTATGGTACAAGAAGCTATACGAATGGGATTCAGTTTCAAGGACATTAAGAAAACAATGGAGGGGAAAATTCAGACATCTGGGAGCAACTATAAATCACTTGAGGTTCTGGTTGCAGATCTAGTGAATGCTCAGAAAGATAATACACAAGATGAATCAAGTCAGACTTCATTACAGAAAGACATTAGTACTGAAGAGCAGCTAAGGCTCCTACAAGAGGAGAAGCTTTGCAAAATCTGTATGGATAGAAATATTGCTGTCGTCTTTATTCCTTGTGGACATCTGGTCACTTGTAAACAGTGTGCTGAAGCAGTTGACAAGTGTCCCATGTGCTACACAGCCATTACTTTGAGGCAAAAAATTTTCATGTCGTAATCTAACTACAGTAGGCATCTTATGTTCTTATTACCCTGATTGAATGTGTGATGTGAACCAACTTGAAGAAATCAGCATTGAATTCCATTAGCATTTGCTGCCAAGTAGGAAGAAAGTGTAAACTGCAATGTTATAGTTGGCAGTCTAAAATTTGAATTTCTGGATTTTTCAGGATGTTAACTGTATTAGCTGTTCTGTTTTTCTCCCACTGTTATTTAATTGAAACCCTAGACTAAGAAGCATCATATTGTAACTGATCACAATGTGTGTTTTATAGTACACTGACTTAGTTTTCTAAATGTAAGTGAATTAATCAGTTGAATTTTTCATTCATTTTGGATAGGCTTAACAAATAGAGCATTCTGTATGAATGGAGATTAGAGTTAATCTTCCCAATCACATAATTTGTTTTGTGTGAAAAAGGAATGAACTGTTTCACACTGATGGAAAGATGGAAATGATTTTTAGATGTTTGTGTTTTAGGATTTTGTCCATTTTCTTTTAAATTATACACATGTACTTGGGTGGATGATTTTTTTTTAATGATTTTGCCATTGTTAAAAGGGTATTTAATGATTGACTACCTTTTAGCCTACATGTACTGACATAAAAAGACATGAGAGGTATATTAAGTGTAAAATCAAATGGCAAAACACTATGTGTAGAATGAGCCAAGTGAAGGTGTGTCTATTTTATATACATATAGAACAGAAGATTGGAAAGATAGGCACCAAACTGTTAAATGTGGTTTCTCTTGAAAGGGGGTGGGGGGATGGGTCCCAGAGGGGCTTTATAAGGGCCTTTCACTTTCTACTTTTTTCATTTTGTTCTGTTTGAATTTTTTATAAGTATTATTACTTTTGTAATCAAAATTTTTAGAAAGTATTTTGCTGATTTAAAGGCTTAGGCATGTTCAAACGCCTGCAAAACTACTTATTGCTCAGCTTTAGTTTTCCTAATCCAAGAAGGCAGGGCAGTTAACCTTTTTGGTGCCAATGTGAAATTTAAATGTTTATATGTTTTTCCTGCTTCGTGGATAAAAAATATTTCTGAGTGGTAGTTTTCTGACAGGTAGACCATGTCTTCTCTTGTTTAAAAATAAATATTCCTGATTTTGTAAAATGAAATATAAAATATGTCTCAGATCTTCCAATTAATTAGTAAGGATTCATCTTTAATCCTTGCTAGTTTAAGCCTGCCTAAGTCACTTTACTAAAAGATCTTTGTTAACCCAGTATTTTAAACATCTGTCAGCTTATGTAGGTAAAAGTAGAAGCATGTTTGTACACTGCTCGTAGTTATAGTAACAGCTTTCCATGTTGAGATTCTCGTATCTTGTATCTTAAAGTTTCATGTGAATTTTTACCGTTAGGATGCTTAAGATGTATATAGGATAAAATGTCAAGTCTTCACCTAAGTTTTTTGTTTTCTTGTCTAGTAATAGTAGCAGATACTTCTGGAATGTTTTCCCAAGATCCTTAAAAACTTCTTGGAAATTATAAAATACTGACAAGAAAAGAAGAATAGTTTTTTGAATATTAAAGAGAAAATAAAGCTTGAGTAAGAATCAATATAGGTTAAAAAGATAAAAGTCTAAAAATGCTTCATAGAACACCCAGGCAAAGATCCTCACAACAACCTGTTGTAGAGGTGAGTGAGGCATTTTACTGTAGAGAAAAGGTTGGGAGTAAAACTGTCAGAAGTTATATTTTTGTTGTATTTTCTAAGAGAAAGAGTATTGTTATGTTCTCTTAACCTCTGTTAATTACTACTTTGATATTCATTTAAAGCATTGCAGATTTAAATGAGAATCTTTATTTTTTTAATTAAAAAAAAATTTTTTTTTATTTTTATTTTTTCCACTGGTGTCTGGCTACAAACCATTCTTAGTGCCCACAGTTCTGAGCACTGAGCGTAGAAATAGCCGCTTCCTCTCTGCCCCAACGGCGCGGGCCACACCTGTGGTGCCGGCAAGTCCGGCATCTGCAGGGCAGTAAGAGTCTTTAAAGTCAAATAATGACCACCCTGTTTTTGTTGTACTATGTAAATCCTCAGTTCTTTACTTTTGCACTTTCTTCCAGTTAGATTTAGTTATATATTCATTAAAAGTTAAATTTTATATGTATAATCTAAGCTTTAAATTTAAACTTAAATTACAAGGGGAGAAAAGTGTTAAAGGTTTAAAAATGTGTTTTCCAGGACACGTCAGCTCCAAGTCAGGTAGTTGGTTCAATCTAGTTGTTGTCCAAGGACTGAATTGTTTTAACATAAGGTTTTCCAGTTCTGGGAGCCTCAGTTCTTTAAAACTCTTTTAAAATTTGTATGTTTAGATTTAAGCAAGACCTTTTTACTCCCCATCAGTTGTGAGATTTAATGCATGAAGCTGATGTGGCTAACAAGTTTATTTTAAGAATTGTTTAGAAATGCTGTTGCTTCAGGTTCTTAAATCACTCAACGCTCCAACTTCTAATCAAATTTTTAAAGACTTACCAATGTTTGCCTGTGTTTGCACTATAAAAAGCACTGGATCCTTCCCATCTATTTGTGCAAAGAATGATCACTTGCAAGGTCAAAAATATAGCCAGATCCAAATCTCTGCCTCCCCCTTCCCAAAATAGTTCTCAGTATCTCCATGTAGACTTCCTTTTCTGTATAAAGTTCACTCTAAGATTTCAAAGGCACCGCCTGTTTTACTACATTTTAGTCATGTGAAGAGTCAAGTTGTTTTGTAATAAATAATTGTCTTTATTCATAATAATCTGGTGTGCTAATCAAAAGCCTTGTCTTAATTTTTGAGAAATGAGTTTAGTGTTTATAAAGTAAATTCCAGTTTGTTAAGTAATGGCTTTGTATTACCTTTCCTGCTAGATTTTTGTTTATTTTCCCTTGGGTTAGGGGCTAAGATGGAGTAGGATGGGGGTAGTGAATGTATGTGATGTGATTTGGCCTTGTGTATTACAATCCTTTGTTGTTTTATCACTTAAATGTTGGTAGTTTTCTTCCTGGTTTTCATTTTAGTGGATAAAATTGGTATTTTGAACTCTGAATGGAGACTACCACCACAGCATTAGTTCCACATATTGAACCCTTTAGACTGAAATGATTGTTTTATTTCCTGATTACCCAGTTGGTTGAATATGGGGGAAAAGGGGTGGAGGGGTTGGAGAAATAGGATAGGTTGTATATCGTTTCTATTAGAGAAAGAAGAAAATGGGACTGAATATTTGACAGATATGGTTTTTAGCCACATCTGGCTTAGAAAAGAAGAAAAGAGGTAACCATTTCTTCATCTGTGAAATGCAAATAGTACCTGTCTTAAAAAATTATAAGAGTTGAGGAGACCGTATGTGTAAAATACTTGTTATAAATGTTAATTCCCTTCCTAACACTTTTTTACCTTCCATGGATTTGCCTTGACTCTGGAAATTAGGGCTAAAACTTAGATAATAACTCTTTCACTGACTCTTAATTCATCTTTTTTGTTTGTCGTAGTTAAGATGCAAATTGCAGTACACAAGTAGGTCAAATCCTTAAAAATATTTAAATTCCTTTTTTAAAAACTTGAAACAATATTCTTACCAAAGTTAGTTGAGTTTTTCTAATAGAAACAATTGGCTTAGTCCCACTTTTATAGTCAGTTTCAGTTTGACTTACAAACTTAGCACAATGTGAATTTCACTTGCAGCACAACAGAATCATAGGATGTCAGAGCTAGAAGTGACCTTAGAGAGTATCTAATTCATTCCCCTTGTTTTAAGATGAACCATCTGAGGCTCAATGGTGAAATGATGTGTTCAAAGCTATATAACTAATCAGTGATAGCCCAGGCTGGGACATAGTTTGATGGTGAAAAACTTCAAGCTACCTCTCCAGGGAGGTCTCAAATGTTTATTTTTTCAACTATTCTTTATTCTATACCATAACATTCACTACATATTAAATGACACTTTAATACAGTAGGACAATCTTAAATACATATGGCTTCAAATTGTACAATATTGCATTAATGTTTCGGGGGTAAGATTCTTATTTGAAGTCTAAAGTTTGCAGAAATGCATATAGATTTTTTTTCATTTACTACATTCTTCTTGTGTAGCATTAATTGTGTATCATTTAAAATTACTATGTAAGTATATTTTGTCATTCTGTCTATACTTAGCAACAAATTTGCATTTTTATTTGATGTAACAATTGCTTTAATGTAATTTTTGTTAGAAGATTTTGCATTACCTTTATACTTTATATCTAACCTGACAGAATGACTGATTCTTATGTCATTGTAATAGTGTTGTAAATAATCACGTGAAATGTGTGAGATAGAGTACTATATTTGTAAATATAATTTTATGGCTGTTTTCATTTAGTAGAAACTTTTCCATCAGTATGGAAAACTAAGAAAATTGCTTTCTACTGTATAATCTGGCAGTTATCATAGATTAAAGCTTATTTTTCTGTGAATAAAAACTTATCCAATAAAGCACTATTCTTTAAAATGATATCTTATTA EMBV3_41383 TCGACGATCACCACTTGACTCGGCCCCATCCTGAAAGAGTACCATTCTTGGTTGCTGAAA Gene GeneID:540404|PRKAA1:NM_001109802:83_cdna UTR3_Alt 3 NULL GeneID:540404 20 GENE PRKAA1 MGC165837 protein kinase, AMP-activated, alpha 1 catalytic subunit EMBV3_42208 TCATGAGTGATGCTTTGGGCACCTTTTGAAGGCCTGTTTCTCTGTCGGCATCCCTGTATG Gene BVV0102_085444 + 0 NULL GK000008.2:40388000-40562530 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02080 GACTGAGATCGTCCCTGTTGGTGAGGCGCTGCTAGAAAACCCAAAGATGGAGTTGCACAT Gene GeneID:540979|STK35:NM_001113768:1252_cdna Constitutive 1 NULL GeneID:540979 13 GENE STK35 NULL serine/threonine kinase 35 EMBV3_20141 TCCCACCCCTGCTGAAGCTGGCCTGCAGTGACACAAAAGATGTGGAGATTGTCATTGTCT Gene GeneID:524304|LOC524304:XM_002693765:14_cdna Constitutive 0 NULL GeneID:524304 15 GENE LOC524304 NULL similar to Olfactory receptor 9I1 EMBV3_07124 TATATATCGGACCGCGAGAGAACCTTGGCGTCTTTTCGGAAACTTGGCGCACGCACTTTA Gene GeneID:539158|ATOH1:NM_001098099:8_cdna Constitutive 0 NULL GeneID:539158 6 GENE ATOH1 NULL atonal homolog 1 (Drosophila) EMBV3_02320 CACACTCAAGAGTTCCACATGACGTTTGATGAGCTGTTTCCAGCATGAAAAGACAAGCAG Gene GeneID:281750|EDNRB:NM_174309:21_cdna Constitutive 0 NULL GeneID:281750 12 GENE EDNRB MGC142327 endothelin receptor type B EMBV3_06199 TGTCCTCGTAAAACTGTACTGGAAGGATGGATGGCAGGAACTTGTACCGTTCAGCTTCCA Gene GeneID:100313181|MIR2384-2:NR_031247:276_cdna Constitutive 0 NULL GeneID:100313181 25 GENE MIR2384-2 bta-mir-2384-2 microRNA mir-2384-2 EMBV3_07785 CTGATTCCAGCGGCAAGGCAGAAACCTCAGTCCTACAACTGCAAGGAACTTAATTCTGTC Gene GeneID:100294962|LOC100294962:XM_002697707:10_cdna Constitutive 0 NULL GeneID:100294962 24 GENE LOC100294962 NULL similar to high mobility group nucleosomal binding domain 3 EMBV3_19905 GATGCGTGGCCTTCTGGCCAAACGTCTGCGATTTCATATTGTTGGAGCATTCATGGTCTC Gene GeneID:782486|COX6C:XM_002690379:11_cdna Constitutive 0 NULL GeneID:782486 9 GENE COX6C NULL cytochrome c oxidase subunit VIc EMBV3_35619 TCTGAGTTGCTTGGGGGCTCCAGCTCTCTGGCACTAAAAATATAACACTGCACCATAACC Gene GeneID:539123|S1PR3:NM_001101186:2_cdna Constitutive 0 NULL GeneID:539123 8 GENE S1PR3 EDG3 sphingosine-1-phosphate receptor 3 EMBV3_26500 AAGAGGTGGTTGCCTCTTCAGTTATGCAGACCCCTATGCAAGGCTACGGGGAACATGAAG Gene BVV0102_214279 + 0 NULL GK000030.2:113161943-113801667 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00253610 1 XLOC_156549 NonCoding TCONS_00253610 XLOC_156549 NonCoding NonCoding - X:113387563-113388374 - TSS190831 811 0.329223181257707 1 0 0.000318752730000816 0.00014868221144957 7.98742495306524e-05 0 4.87021454104846e-05 4.4106692733153e-06 7.19075949329335e-06 0.000211499869014236 0 0 0 9.25886548127596e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NM_001142857.1 EFCAB1 Homo sapiens EF-hand calcium binding domain 1 (EFCAB1), transcript 7e-08 62.6 67.30 0.256473489519112 0 noncoding TGTTTTTCTAACATTGTTAATTTGTCTACCTTTGCCCTCTTTTAGCCCTCTGTGAGCATCTTGTTTATTTTGAATTCTTTGTCAGGCAGTTTTTGATCTCCATTTCTTTGGGGTCAGTTACTGAAGCTTTCCAGGGTTCATCTGGTAGATTACTGTTCCCCTGATTCTTCATGTTCCCTGTAGCCTTGCATAGGTGTCTGCATAACTGAAGAGGCAACCACCTCTTCCACACTCCATGGATTGACTTTAGTAAAGGAAGAATTTCACCTTTGGGTTGAGCCAAGCTGGAATATGCTGTGACCCTGGTTGTAGCAGTACAGGGCACAGAGTCCAGTGTTGTATGGCAGCACCAGTTCTTGGGAGGGGTATGGGGTAGTCTGTGTCCTTTTGTCTCTGGCTGTGGGGTCCACACACAGTATTGACAACTGTGTGGCCCTTGGCAAATATCTGAAGTTGCCTGAAGTAGCTTCAAGGACTATTGTCATCCTCAGCAACACCTCCAGATTTAGTGGCTAGGGACCAGGGAAGGCAGCAGCAGTGGCCGGAACTGGTGGTGTCCCCACACTTGGTGTGGGGACCAGCAGCAGATGCTGTGTAGTGACAAGGGCTAAGGCCAACTACAGGTACCCTGTCAGCATACTCTTATGTGGGCTACACAGTCTCCCCATGGGCACATGCTCTAGTGGCTGGTGTCAAGCTGGTGGTGTGCAACTGCACAACTGGAGAGGCTAGCGCTGAGTGTGTACATGGCAGTGGGGGTCAGACGTAGAGGTCTAGGCTGGCATTTTTCACACATGCAGCTGCAGAGGCC TCONS_00248060 TCONS_00248061 . 5' 519710 TCONS_00248060 TCONS_00248061 . 5' 519710 EMBV3_35756 CGGCCATCTCCTGCATGAAGTTGCTGGTGAGCATGGGCGCAAAAATCGAAAATATCTTCA Gene GeneID:100299244|LOC100299244:XM_002683913:2_cdna Constitutive 0 NULL GeneID:100299244 Un GENE LOC100299244 NULL hypothetical LOC100299244 EMBV3_31258 CAAGAGTGGAATCTTTGAAACAAAATTAAGAGGAAAAGCAGACCTCTGGCAAGACTGATC Gene BVT0102_338850 + 0 NULL GK000030.2:90820967-90831726 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08801 ACACACACAATGTTGCTTGTTAGCAGGCTGGGGTTCGGTGTCCTACTCCTGAGGTGAGCA Gene GeneID:504474|STT3B:NM_001097570:41_cdna UTR3_Alt 2 NULL GeneID:504474 22 GENE STT3B MGC152029 STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) EMBV3_23159 ACACACCTTCATTTGACCCCTGTGCCTGGCTGAGCCTCCTTTTCTGACAGTTTCCATTCT Gene BVV0101_010138 + 0 NULL GK000029.2:44637444-44638895 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00165444 TCONS_00165443 TCONS_00165445 1 XLOC_100523 Coding TCONS_00165445 XLOC_100523 Coding Coding CFL1 29:44637614-44642314 = TSS123585 2387 1 TCONS_00165445_2 166 4 0.492870823579485 0.000340069192969679 0.000952559151317554 0.000374217829781268 0.000134076766559735 0.000217118552806433 0.00027370127480764 0.000289174255636038 0.000306037902016431 0.000802745493475826 0.00195406833375508 0.000839105920312402 0.000565043627059354 0.000352996081188914 0.000474068849571229 0.000130984897128272 0.0109423579414523 0.00260563064092865 0.00957336426674826 0.000459585540693721 0.00255195050983002 0.000272613616391546 0.00281649148283485 0.0028559838881993 0.00433192022953367 0.00124962833646078 0.000645001405615961 0.000696503729663949 0.00154158534247194 0.00145446696883517 0.000945511657683693 XM_003588057.2 SNX32 PREDICTED: Bos taurus sorting nexin 32 (SNX32), mRNA. 0.0 2547 100.00 0.591118558860494 NM_005507.2 CFL1 Homo sapiens cofilin 1 (non-muscle) (CFL1), mRNA. 0.0 1566 91.20 0.473397570171764 TCONS_00165445_2 sp|Q5E9F7|COF1_BOVIN COF1_BOVIN Cofilin-1; 6e-118 335 100.00 0.993975903614458 1 coding 0 0 0 0 -0.342885274096017 0.286746613528636 -0.0836825641503019 0.277547648219859 CGGAAGGGGCCGGGAGAGGCCGCGTTCAGTCGGATCCCGGCAGCAGCTGCAGCGCCTCTCGTCTTGTAGGCTCTCCTAGCTATCGCCTTTTCGCTTCCGGAAACATGGCCTCCGGTGTGGCTGTCTCTGATGGGGTCATCAAAGTGTTCAACGACATGAAAGTGCGTAAGTCGTCGACACCAGAGGAAGTGAAGAAGCGCAAGAAGGCGGTGCTCTTCTGCCTGAGTGAGGACAAGAAGAACATCATCCTGGAGGAGGGCAAGGAGATCCTGGTGGGTGACGTGGGCCAGACGGTAGACGACCCCTATGCCACCTTTGTCAAGATGCTGCCAGACAAGGACTGCCGCTACGCCCTCTACGATGCAACCTACGAGACCAAGGAGAGCAAGAAGGAGGACCTGGTGTTCATCTTCTGGGCCCCTGAGTGTGCACCCCTTAAGAGCAAAATGATCTATGCCAGCTCCAAGGACGCCATCAAGAAGAAGCTGACGGGGATCAAGCATGAATTACAAGCAAACTGCTACGAGGAGGTCAAGGACCGCTGCACCCTTGCAGAGAAGCTGGGGGGCAGCGCTGTCATCTCCCTGGAGGGCAAGCCTTTGTGAGCCCCCTCCAGCCCCCTGCCTGGAGCATCTGGCAGCCCCAGACCTGCCCACGGGGGTTGCAGGCTGCCCCCTTCCTGCCAGACCGGAGGGGCTGGGGGGAATCCCAGCAGGGGGAGGGCAGTCCCTTCACCCCAGTTGCCAAACAGCCCCCCCGACCCCCTGGACCTTCCTCCTCCCTCCACCCCTGACGGTTCTGGCCTTCCCAAACCGCTTTTGATCTTGATTCCTCTTGGGTTGAAACAGACCAAGTTCCCCCCCCAGGAACCCCTGTTTGGGGGGGGCCTGTATTTTTTTTAACGACACCCCAGTTCCCTGCCTGTTCCTCCCCTTTCCCATGCTGCCAACTTCTAACTGCAGTAGTGACTTTGTGCTTGTCTGTTTAGTTCTGTGTATAAATGGAATGCTGTTGAGAGGACCCTCCCTGCGCCGCCTGCCTCCCCTCCCCCCTTTGCTCTGGTCACAGCCACTCATGGAAGCAGGACCAGTAAGGGACCTTCAATTTAAAAAAAAAAAAAACCAATAAAAAGGCTCACTAATGGGATGTTTGTTTCAAGGTTGGGGCCCTTGGGGACCTTGTGCAGGAGGCAGGGTGGGAGAACGAGCATCTCCTCTGTACCCACCTCTCCAGCCCCCACACACCTTCATTTGACCCCTGTGCCTGGCTGAGCCTCCTTTTCTGACAGTTTCCATTCTTCACTTTATAGCTGGCACCAGGCTGGCTGGCTAGGAGGTAGCTCAGCCAGGGTGTGTCTGCTACTGCCTGCAGGGGTCCCTTGAACAGAGGGGCTTCATGCCTGAACTGGCTGCTTCTGTTGCCTTGATCCAGGTGGGCAACAGGACGGTGAGGCCCGTCCTTTTATTCCCCATGCAGCCTTCCCAGATGTGGGCCGTGAGGCTGCAAGTCACTGGCTGCCTCGAGCTTGTTCTCCACCTTCAGGAGTTGGTCTTTGCTCTGCTTCTCCCCTGGGTGGCTGACTCATTTATGAGGGCTGGGTCTGCTGGCTGCTGTGAGTCAGAAGCCAGGTTGAGCCTTTGGCCTTAAGCAGCTGTGTCTGGGGTCTAGGGTGGGGCCGGCCAGGTGGAGCCCAGGACTTCAGACCCAGGTGTCTTGGGTACCACCTTCCTGGTGTTTAACCAGGAGGGTGTTGGCTGGAGCCTCAAGCCTCTTGCCAACTTTGCTGTGGGCTCTTTCCAGACTGTACTTTGGGTTTTCACGTGCCCCACAGGTAAAGGTGGAAGTCTTGTCCTAGGGGTGGTGGTAATGCAGGATTTATACTTCTCCCCCCACCCAACTTCCCCATCAGCTAAAAAGCTGCCTGGAATTAAAGATTGTTCTTTGGAACTTGCCAGTATTTCTGAGAGGGAGGCAGGAAGGCGTATTTCATTCTCTAATTGGGAAATGGGTGCAGAGGATTTATAATTAGTTTTATGTGTGGTCTGTGCCAGGGTTTATAAGGGGGTGGTGGCACATCTTGACTGCTCCTGGGTTCCAAGTTCTGGATCTTGTCCCTTTATACAGGGTGCCTCCTGGCACTCTGCAGAGCGACTGAACACATTGCAGGGGTGTCCCCCGGGACCTGGCCTCTACCATGGTCCCCCTGGTAGAGGATGTACCTGGTGGGCCCTGCAACTGGAATATCAGGACAAGCAAGCCTCCTTGTAAAACCAGGATTTTTATTTGTGAACAGGCTGGAGACAAACGAACTCGGACCAGCATGGATGGAGGCTGTCCTCTGCCTCTGCGGAGGGGAGGTCATGTTCCCTGGGCTTCCCCAGGTTGGG EMBV3_37899 CTTCAGTTGTTGGAAGAGGGTGCCTGCTACGACCTGTATGTTCTCTTGGTCTGTGTGTTC Gene BVT0102_410972 - 1 EMBV3_34282 GK000013.2:32187238-32347668 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05773 TCCTCACCAATGCCAGGATCGCCCAGATTGGGATGAGCATGTTGACAAGAAATGTTGCTG Gene GeneID:509174|LOC509174:XM_002693314:166_cdna Constitutive 0 NULL GeneID:509174 15 GENE LOC509174 NULL similar to olfactory receptor Olr51 EMBV3_05305 TCTTTGGCTGAGTGATCATGCTGTTCCCCACGACGTCTTACTGGTTGGTATCGGGTTTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28947 AGGTCTGCACCATTCTGGTCCTTTGCTGTTGGCTGATTGGGCTAATTGTCATACTCCCAC Gene GeneID:782591|LOC782591:XM_002687435:206_cdna Constitutive 0 NULL GeneID:782591 5 GENE LOC782591 NULL similar to olfactory receptor 769 EMBV3_37501 TGAGAACAAGAACTTGGGCGATTTCCGGATGAAATTGGAAGAATATTTGGTTATCATTAG Gene GeneID:280823|IL3:NM_173920:7_cdna Constitutive 0 NULL GeneID:280823 7 GENE IL3 NULL interleukin 3 EMBV3_19544 CAGGGGTATCATTCGTTCATAAAAAAGCCCTGAACTGACTTTCTTGTGCTATTCCCACCC Gene GeneID:518046|GTF2H5:NM_001040537:26_cdna Constitutive 0 NULL GeneID:518046 9 GENE GTF2H5 MGC134263 general transcription factor IIH, polypeptide 5 EMBV3_35302 TCCTTCAGTGCCTTATGGAATACTCTGAGACTCGCGACAATGCAAACCATCATTGAAATC Gene GeneID:534626|GRIA3:XM_002699495:54_cdna Constitutive 2 NULL GeneID:534626 X GENE GRIA3 NULL glutamate receptor, ionotrophic, AMPA 3 EMBV3_01616 TGTACAGTGCCCCTGCCTGTTCCAGTTCTTATTTAACACCCCGTGCCCACCCTTCAGTTG Gene GeneID:526392|NFKB2:NM_001102101:165_cdna Constitutive 0 NULL GeneID:526392 26 GENE NFKB2 MGC179374 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) EMBV3_00557 TGGGAGTCCTATTTTGCCAACTATGCGGTCATTCTCAAAATCTTCCCCCAACACAGCCCC Gene GeneID:539370|DPEP2:XM_002694905:978_cdna Constitutive 0 NULL GeneID:539370 18 GENE DPEP2 NULL dipeptidase 2 EMBV3_35186 CTCCACACCTGTGCTGACTCAGTGCTCACTTTTCATCTTCCCCACTAATGACCCAGCCTT Gene GeneID:505917|VWA1:NM_001103230:52_cdna Constitutive 0 NULL GeneID:505917 16 GENE VWA1 MGC138086 von Willebrand factor A domain containing 1 EMBV3_33897 CTCCAGGGGGCAGTGTTTTATAACGCATTTTCATTTCCCCACTTGGTGGCTGAAGGATGG Gene GeneID:407128|BMPR1B:NM_001105328:2_cdna UTR3_Alt 2 NULL GeneID:407128 6 GENE BMPR1B ALK6 BMP15 BMPR-IB BMPRIB bone morphogenetic protein receptor, type IB EMBV3_18448 ATGTCCCTCATTGCTGCTGGCTTCACAAGGAGAAAAGTCAAGAAGCAATTGAAATTACAA Variant GeneID:506787|PDE8A:XM_002696586:24_cdna 568^685 3 EMBV3_16974 GeneID:506787 21 GENE PDE8A NULL phosphodiesterase 8A EMBV3_40597 TTCCAATGCAAGTGGTGTGGATTCGATCCCTGGTGGGGGAACTACTAAGATCCTGTAAGC Gene GeneID:523081|SLC23A3:XM_002685578:171_cdna Constitutive 0 NULL GeneID:523081 2 GENE SLC23A3 NULL solute carrier family 23 (nucleobase transporters), member 3 EMBV3_05116 GACCTGCAGCCGACATTCCTGGCGCCCCGGACGAGTCCACTGCGTGCAGAGGCGTCATGG Variant GeneID:100140857|LOC100140857:XM_002692317:71_cdna 238^428 1 EMBV3_40490 GeneID:100140857 13 GENE LOC100140857 NULL hypothetical protein LOC100140857 EMBV3_38709 ACATGTTGGACAAACTCATCCGCAATCCCAACAGCTTGAAGAGGACAGGGACCGAGAGCT Gene BVT0102_026246 + 0 NULL GK000002.2:109760427-110353555 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106205 TCONS_00106208 TCONS_00106213 TCONS_00106210 TCONS_00106207 TCONS_00106214 TCONS_00106212 TCONS_00106206 TCONS_00106203 TCONS_00106211 TCONS_00106209 1 XLOC_062748 Coding TCONS_00106214 XLOC_062748 Coding Coding EPHA4 2:110248331-110405363 j TSS78217 3822 1 TCONS_00106214_4 934 0.0251177394034537 17 0.975769115652323 0.000527011728997953 0.00143780766344473 0.000917854796950619 0.000670701405861892 0.000632911679526935 0.000163309800133164 0.000254950238121348 0.000517421783489997 0.000807965288369286 6.02893443524429e-05 2.33605338439451e-54 3.45426947502756e-144 3.86914036540112e-53 0.000615807832876231 0.000186941227646636 0.00175653706684237 0.000143221102774258 7.81288044668774e-50 0.00101898659019383 1.239900397871e-07 0.00027717321469955 2.80401880221808e-05 0.000144200249657206 0.000335306477481333 0.000124389498483165 0.000392495484034797 0.000511230453231394 3.50178304897894e-06 4.43495047079929e-09 1.24983219829634e-09 NM_001083441.1 EPHA4 Bos taurus EPH receptor A4 (EPHA4), mRNA. 0.0 1539 100.00 0.222919937205651 NM_004438.3 EPHA4 Homo sapiens EPH receptor A4 (EPHA4), mRNA. 0.0 3669 89.31 0.728414442700157 TCONS_00106214_4 sp|Q03137|EPHA4_MOUSE EPHA4_MOUSE Ephrin type-A receptor 4; 0.0 1870 93.31 0.998929336188437 7 coding 0 0 0 0 -0.00607128304228952 0.954660377949586 -0.076140325154234 0.14238345357491 GGCAGGAGCAGCGTTGGCATCGACGAACCATGGCTGGGATTTTTTATTTTGTCCTCTTTTCGTTTCTCTTTGGGATTTGCGACGCTGTCACCGGTTCCAGGGTGTATCCCGCGAATGAAGTTACCTTATTGGATTCCAGATCTGTTCAGGGAGAACTTGGGTGGATAGCCAGCCCTCTGGAAGGAGGGTGGGAGGAAGTGAGTATTATGGATGAAAAAAATACACCAATCCGAACCTACCAAGTCTGCAACGTGATGGAGCCCAGCCAGAATAACTGGCTGCGAACTGATTGGATCACTCGGGAAGGGGCTCAGAGGGTGTATATCGAGATCAAGTTCACCTTGAGGGACTGCAACAGTCTTCCGGGTGTCATGGGCACTTGCAAGGAGACGTTTAACCTGTACTACTATGAATCAGACAATGACAAAGAGCGTTTTATCCGAGAGAGCCAGTTTGCCAAAATTGACACCATCGCAGCCGACGAGAGCTTCACCCAAGTAGACATTGGCGACCGAATCATGAAGCTAAACACGGAGATCCGGGATGTGGGGCCGTTGAGCAAAAAGGGGTTCTATCTGGCTTTTCAGGATGTGGGGGCCTGCATCGCCTTGGTATCGGTCCGCGTGTTCTACAAGAAGTGTCCGCTCACCGTTCGCAATCTGGCCCAGTTTCCAGACACCGTCACAGGTGCTGATACTTCTTCCCTGGTGGAAGTTCGAGGCTCCTGTGTCAACAACTCTGAAGAGAAGGATGTGCCAAAAATGTACTGCGGGGCAGATGGTGAATGGCTGGTACCCATTGGCAACTGCCTATGCAATGCCGGGCATGAAGAGCGGAATGGAGAATGCCAAGGCCCACCATCTGCTCCTCTCAACTTGATTTCAAATGTCAATGAGACTTCTGTGAACCTGGAATGGAGCAGTCCTCAGAACACGGGTGGCCGCCAGGACATTTCCTACAATGTCGTGTGCAAGAAGTGTGGAGCAGGTGACTCCAGCAAGTGCCGACCCTGTGGAAGTGGGGTCCACTACACTCCACAGCAGAACGGCCTGAAGACCACCAAGGTCTCCATCACTGACCTCCTGGCTCATACCAACTACACATTTGAAATCTGGGCAGTGAATGGTGTGTCCAAGTATAACCCTAGCCCAGACCAATCCGTGTCCGTCACTGTGACCACCAACCAAGCAGCACCCTCATCCATTGCTTTGGTCCAGGCTAAAGAAGTTACAAGATACAGTGTCGCTCTGGCTTGGCTGGAACCAGATCGGCCCAACGGGGTGATTTTGGAGTATGAAGTCAAGTATTATGAGAAGGATCAGAATGAACGAAGCTATCGGATCGTCAGGACGGCCGCCAGGAACACAGATATCAAAGGCCTGAACCCTCTGACTTCCTATGTTTTCCATGTCCGAGCCAGGACAGCAGCTGGCTATGGAGATTTCAGCGAGCCCCTGGAAGTCACAACCAACACAGTGCCTTCCAGGATCATCGGAGACGGGGCCAACTCCACTGTCCTGCTGGTCTCCGTCTCGGGCAGCGTGGTCCTGGTGGTTATTCTCATCGCAGCTTTTGTCATCAGCAGGAGACGGAGTAAATACAGTAAAGCAAAACAAGAAGCAGATGAAGAGAAACATTTGAACCAAGGTGTTAGAACTTATGTGGATCCCTTTACGTACGAAGATCCCAACCAAGCAGTTAGAGAATTTGCCAAAGAAATCGACGCATCGTGCATTAAGATTGAAAAAGTCATAGGAGTTGGTGAATTTGGTGAAGTATGCAGTGGGCGTCTCAAAGTGCCTGGCAAAAGAGAAATCTATGTGGCTATCAAGACACTGAAAGCTGGATATACAGACAAGCAGAGAAGGGACTTCTTAAGCGAGGCCAGCATCATGGGACAGTTTGATCACCCGAATATCATTCACTTGGAAGGAGTTGTCACCAAATGTAAACCAGTAATGATCATAACAGAGTACATGGAGAATGGCTCCTTGGATGCATTCCTCAGGAAGAATGATGGCAGATTTACGGTCATTCAGCTGGTGGGCATGCTTCGTGGCATTGGGTCTGGGATGAAGTATTTATCTGATATGAGCTATGTCCATCGAGACCTGGCTGCACGGAATATTCTGGTCAATAGCAACTTGGTCTGCAAAGTATCTGATTTTGGCATGTCCCGAGTGCTAGAGGACGATCCAGAAGCAGCATATACCACCAGGGGTGGCAAGATTCCTATCCGGTGGACTGCACCAGAAGCAATTGCCTATCGTAAATTCACATCTGCAAGTGATGTATGGAGCTACGGGATCGTTATGTGGGAAGTGATGTCCTATGGAGAGAGACCTTACTGGGACATGTCCAATCAAGATGTGATTAAAGCCATCGAGGAAGGCTATCGGCTGCCCCCTCCAATGGACTGTCCCATCGCGCTCCACCAGCTGATGCTAGACTGCTGGCAGAAGGAGAGGAGCGACAGGCCGAAATTTGGGCAGATTGTCAACATGTTGGACAAACTCATCCGCAATCCCAACAGCTTGAAGAGGACAGGGACCGAGAGCTCCAGACCTAACACTGCCTTGCTGGATCCAAGTTCCCCTGAGTTCTCCGCCGTGGTATCAGTAGGCGATTGGCTCCAAGCCATTAAAATGGACCGGTATAAGGATAACTTCACTGCTGCTGGTTATACCACGCTAGAGGCTGTAGTGCACATGAACCAGGATGACCTGGCCAGGATTGGCATCACAGCTGTCACACACCAGAATAAGGTCTTGAGCAGCGTCCAGGCAATGAGAACCCAAATGCAGCAGATACACGGCAGAATGGTTCCAGTCTGAGCCAGTATTGAATAAACTCAAAACTCTTGAAATTAGTTTACCTCATCCATGCACTTTAATTGAAGAACTGCACTTTTTTTACTTCGTCTTCGCCCTCTGAAATTAAAGGAAAAAAAAAAAAATCTGCAGCGTTGCTTGGTGTACAGATTGCTGAAACCGTGGGGCTTACAGAAATGACAACTGTCATTTGAATTAGACTTGGAACAAATTGTTTCTCAGAAGTACATCCGTCCATCACTAATGTGTAAAATACATGTACCTATATAAATAGACCACCGCCTCCGAGTTTCAACGCCGTGTTTGCTGCCAGACGCTGAGCTTCTCTGAGACATCCTCGATCGTCTCTTCATTTGGAATTACAACCGTAGTATTTTGTTTGTGGCATAAACTACAGTCCATCCTTCTTTCACTGGAATGAAGACCATGCCCAGGACCATTTTTTGAAAGGACCCGGTTGTAACTTTTAAGGCTTGGTTTGTACAATGGATAAAACCTAAGTGAACGTCATGTGATTTATCAGTGTTGCTGCCCTGTGCTCCGGCCACCTGGTGGATTATGACGACATGAGGGGCTGGAGAGAAGAGGAAAGTGGATTTTAAAATAATAATAGTAATAATAAATCCCAACACCATACCCCCTTCCTGGGCAAACCAGGGGCTTTGGGCCCGAGGCTGTGCCATATAAGTCTTATTTGGGAACTCTACAAACTTCTCGTAACTACCTTATGGATAGTGGACTGTGACAATCTTGTGTAGGGAACTTTCATACTTTCCTCCTTTAAAGAAGCAAGCCCAAATCTACAAGGTTGCTTCTACACCTTAGCTATGTGACCAGTGCTGCTATGAACATTGGGGTGCCTGTTTCCTTTTGGAGTGTGGTTTTCTCCAATACATGCCCAGCCGTGTTCCTGTCCTGCTCTAGTGCCCCCGATACCAAACGAGATCAGCTGGGAGAGACCTATCTAGATGGCAACAGTGAGACTTGGAAG EMBV3_43418 TTCCTGTTCCATTACTCGGGAAACGCAGGCCCAACCCTTGGTGTCCAGTGTATAGAGGAA Gene BVT0102_083853 + 0 NULL GK000011.2:98580374-98585647 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31249 TCCGAGCGTGTCTTTGGGTCACCAGTTACCTCCTTATAGTGTGTGCTGTGAGTGGGTGTT Gene GeneID:523153|LOC523153:XR_084672:242_cdna Constitutive 0 NULL GeneID:523153 2 PSEUDO LOC523153 NULL similar to Ras association and pleckstrin homology domains 1 EMBV3_37930 TCAAGTTTCACCCTCCCCCACCAAAGCCATCCCCTCCAGGACATCAGTGTGCCATTTACA Gene GeneID:100139498|MCM9:XM_002690080:5_cdna Constitutive 0 NULL GeneID:100139498 9 GENE MCM9 NULL minichromosome maintenance complex component 9 EMBV3_14890 GGCTCTGGTGCCAGGGACTGGGTTTAAATCTTGATTCAGCTACTTATTATCCTCTGACCT Gene BVT0102_155142 + 0 NULL GK000022.2:30220278-30411676 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37893 CCTGGGTTTCTGGACTCCCTGGTGCTGCTCCTAACCTGAACTCATTATCTACTGCCATAC Gene BVV0102_172039 + 0 NULL GK000007.2:47699184-47717604 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216943 TCONS_00216945 TCONS_00216944 TCONS_00216946 TCONS_00216947 TCONS_00216942 1 XLOC_131384 Coding TCONS_00216942 XLOC_131384 Coding Coding SAR1B 7:47713567-47747833 j TSS161682 5146 2 TCONS_00216942_1 158 6 0.849992703925288 2.30189861376876e-130 1.40475009216546e-76 2.69838844210061e-40 1.58472542889832e-99 1.22382934441245e-98 2.67594095688496e-52 1.18772407953496e-128 1.95509963113344e-48 7.74114658362528e-41 0.000369554458255136 1.05731254707474e-12 2.59735932586252e-12 9.36327301327433e-06 7.73294965049964e-37 7.7661602470775e-25 0.00274482523702007 0.00148257622407656 6.45781073705144e-24 7.87515521462078e-134 4.75299552071903e-134 3.53661150813102e-16 0.00159946223381618 0.000512248354079475 0.00176388520163039 2.22689732425886e-31 3.50238432199018e-15 2.22368909542212e-48 2.88634706353169e-07 0.000214342699496557 0.000107739445252317 NM_001035315.2 SAR1B Bos taurus SAR1 homolog B (S. cerevisiae) (SAR1B), mRNA. 0.0 1687 99.89 0.182083171395258 NM_001033503.2 SAR1B Homo sapiens SAR1 homolog B (S. cerevisiae) (SAR1B), transcript 0.0 1838 84.49 0.327438787407695 TCONS_00216942_1 sp|Q3T0T7|SAR1B_BOVIN SAR1B_BOVIN GTP-binding protein SAR1b; 7e-107 308 79.29 0.993670886075949 2 coding 0 0 0 0 -2.15217282053756 0.0498057006762828 -0.122122236118767 0.190909430798391 GAACTACGGCCGCGGCAGCCATCGCTCTTTGCGGTTGGGTGTCGGAGTGAATAGGGCCGACTCCAAGCAAGGAATTGCGTTTTCTCCAACCGCAGACCCTGTAAGATTTGGCTATGTCCTTCATATTTGACTGGATTTACAGTGGTTTCAGCAGTGTGCTACAGTTTCTAGCTTCAGAAGAACTAACCATTGCTGGCATGACCTTTACAACTTTTGATCTGGGTGGACATGTTCAAGCTCGAAGAGTGTGGAAAAATTACCTTCCTGCTATCAATGGCATTGTATTTCTGGTGGATTGTGCAGACCATGAAAGGCTGTTAGAATCAAAAGAAGAACTTGATTCACTAATGACAGATGAAACTGTTGCTAATGTGCCCATACTGATTCTTGGGAATAAGATTGACAGGCCTGAAGCCATCAGTGAAGAGCGGTTGCGAGAGATGTTTGGTTTATATGGTCAGACAACAGGAAAGGGCAATGTATCTCTGAAAGAACTGAATGCCCGGCCCTTAGAAGTTTTCATGTGCAGCGTGCTCAAAAGACAAGGCTACGGAGAAGGCTTCCGCTGGATGGCACAGTACATTGATTAACCAGCCCACAGCAGTTCCAGGTCTCACCATTCAGGCCTACTCAGAGATTTGATCACTCAACATGCATAACTTGAATTCAATAGACTTTTATTGTTGGTTAGAAAACAGATGTTTTTTAGATTATTAATATTTTATCAACTTAATTTGAGTGAGAATTGAAAACTGATTCAAGTAAGTTTGAATATCACAATATTAGCTTTCTAATTCCATAAAAATACTTAGTTTTTACAGTTTATAATGTGACATTACCCCCAGCACCATTTTTGAACAGCAACTTTCCAGACATTTGAAGCACTTTTTAACAACATGAAACTATAAATATAAACCATATTTAAAAGCTCATCATGTTAAATTTTTTATGTAATTTTTTGGAACTAGTTTTTAAATTTTAGATTATATGTCCACCTATCTTTAGTAAGCAGTTAATAATAAGCTTTTATGACTGCATGATGCCTTACAGTTTCAATTATTATTTCTCATGCAAACGTCATGCAATAAAACAAACCCTAATGTTTGGCATCCTTGTTGGGCAAATGTTTCATTTTAATGTGTCTTATCTGGCTAGTATGCTCTGAAGTTTTGCATATTTAATATTAAATATATGAGAGGGTTGTGGGGAAAGGAGATTGCTTTAGAATATTTAGGATAATGTTTAAGTCCCTACAGGCTTTTGCATTTATCTAGAGACAAGTTGTGTTTGGTTGCACCTTATACCACATTTATCTCTGAATCATGTATATTTTTATCTGTAACACTACCATGACCAGTGCTGACGGGGTCCACGTCCTAGTCCCTGTGGGATCGGCCTCCTGAAGAAAAGCACACGTTCTGGTACAACCCAAAGTTAATTTTTGGTTTGATGAGCCAATCCCAGTTGTCTAATTCTGAAGTGCTCCAATCTTAATGGCACCCAGTTTGGTAATCTGCCTTTTCACCAAAAATAATGACAAGCACCAGTGTCCCCACACCTAGAGGTACCCCCCAGTCTTACTTAATGGCACTCAGTGGTACTCAGCAGGGCAAGTGACACATAGGGAGTTGTGCAGTTGCATGGTGGAGGCCTGCATCTGAGGATAAAGAAAGCGTGTTCTGCCTCAGTTGTCACTGAGATATTTGAAGACTTTGTTCCTGTCCTATGGCTCTTTTGCATTTTGGGTATATTTTATTTCTTGGTGGAAAGAAAATGAATCCATGTATTTAATTTTCTTTTTTCTTAATTATTCTCAACCAGCTCTTAACTTTACAGCACAAAGGCTTTTGTTTTTTGATACCATGCTTGCCACATGGTAGTGTCTACAGGCCTCACTGATAACATTTTCTAATCAGATTTTGGTTAGCTTTTTAAAGCATTTTAATTTTCTAAGAAATTGAATTCTTTTTTCCCATATGTCTGAGATTCCCATAATTAGTTGAAAGACAAGTGCCAAATATTTATTTTTAAAGACTCTCAAGCTTAAGATTTCCTCTCTTGGTCATAAACCAAGGTTTTATAGTATATTCAACCAATTCTATTGAGAATAGATTGCTCCAGTTCCATCAAGAGTAATTTTAATATCAGAATTACTGTTTTCTCTAGCTCTTGTCCAAGTCAGAGTTAATATAGCCCTTTCTGTCATCAATAATATAATACTGTATGTGAAGCAAATAAGGATTGAAAGATATGCCTGGAAGGAATTACTAGTTAGCTAAACCAACAAGGTCATTTCATCATGACATTTGGTTTTAGGAATTTAGCTATCCTGTTTCATTTTCAGCTTCCTTCAAAAGAAAAATAAAAAAGCTTTCTCCCTGTCTAAAAATATCAGTAACACCAGGGAAAAGTAGGAAATGACATTCAGCCTCTTGGTTTATTCTGCCAGATATGTTTAAAGTTCTCATTTCTAACGTCTTGACTGAACAGAATTAAGCCTTATTCAAAGTAATTGCCTCTTGTTGATGGTATCTGTTTTCAGTATTTACAGGGACATGCTTTTCTTCAAGTATTTCCTAGTATCGTGATAATTGAGAAGTTAATTATCTGTGTTATAAATTTGTGTAAAAGAAAAAGCTTACTGGTTTCTCTAGAGGGGATTTGCTTTCTGGCACAAACTCTCTTGTTCCAGAACTCTCATTCTAGGTCCATCACTGGGATCAAAGGAACAGAGTCACTTTGTGGACCACAGCTAAACTGTGGATATTTTCCCACTCATGTAAGAGTCTTCCAGAGTCTGAACCTCTGGAAATGAAGGTGCACTTTCCTGCCAGCTCCAGGGAGATGGGCCTCAGAGTTCGCCAGCCATTGGCCTTATCATCCAGCTCTGAGAGCTCCTCAGAAAACGTAGAGAGTCACTGCGTCCATCAGGAGAAGCAATTTAAGAGAATGCCAAGAAATGGCAGAAGCACATGGGAAAAGCATATACTCTGTATGTGCCTGTGCAAGTGTGTACGTTTGTGGAGTATTTTGGGGGTAAATGTAGTTAGTTTTGTTCTTCCCTCTATAAAGTGTGAACATGTACAAGTTAAGACTGGATTCCATATACATCAGGAAGTGTTCAAAAGATGTTTTAAAATCTTAAGTCCAAAACTCTAAAAACAGATGGCCTCAGCTGGCTTATATACTTTTAAAAAGATTCTTAACCCCACACCTGTTTCAATGACTGCTATTAATTATACTTTTCTGTAACTGGTTAAATTGATGGATTCCAGTTTATCTTGATGAATTTTTAGATTGGAGATTATAGCATTTTTAAAAATTGGGCACAGATATTCCCTGAAGAATATGAAAAATATTTACTATTGACTTAGTTAACCCAGTATCCCTGAGTGCCAAAGAACTATGAATTCAGATATTGCCTGCATAGATCTAAATTTTAGTTTTGTGTGCCGTGTACATATACAACTTTACTGTGGTTTACAGCATAAACACAGAATGTTGTTTCTTTTCTTTAGTTTTCAACTGGCTCACACGACATGTAGTGCTTTCCAGCACATAAACTACTTGTAAATCACTGAAATAGAGTAATAACTGCGATACAAGTGTTTCTTATCTTCTGCAAAATGATTTGATTAACCACATTCAAAATCCAGCATTTTCACAAGTTCCGTCATTGAAAACAGAATACCTCTAGCTGATGACTCGAGCTTCAGCAGACAGGTTTACATTTTCCGAACCTGTATGTGGTATGTGACTCAGTGTGGCTTTTCAGTCTTGTTCGTCACTTACATGACTGAAGTTTGCAAGGCTTCTATTGCCAAATAAATTTTGATCAGAGTACACTGACAAAGCTAATATAAAAGAAAGTTTCTCAGAATATCGTGTGTTGATTTAGAGTACATTGTTTGAATCATTTTAAATATATGTAAAAGTTGGTGAAGTTTCAAAAAAATCTCCAAGACAACATGAAAAATTTGAGATTAGCAAATATAAATTTATGGATAAAATTAATAAGGAATTAGAGGTTTTCTATAAACCTTTAATTTTTTTTTGTTATAAATAGTAAGAGTTCAGAAAACATATTTTAAATTAAGGACTAAATTCTCAAAGCCCAATATTAATGTTTCTGGTCTTTCCAATCACTGTCCTTTTGAAATGCAGATTAGTGCTTTTTAACCAAAAAAGAAAAAAAGAACAAGCTCTTAAAAATATGGGGCTGTGCCTCTGTGTAAAGTGATTGGGATTTTGTTAAAACCATGTTTCTACTCTTGAACCCTATAGCCATTCCCCCTCACATATCTCCAGCCCATACCTGGAAATCCCTGAGTATAAAGGGAATTGACCTCTCTTGATTTGACCAACTATTGACTATCTATTGAAGATGCAGTTTTGAATCAACTAATTTTTGTCTTCACAATTTAAAACATTAAATAGATAATATATTTAATACCTCTGATTATTCTGGGCTTTGACCATACCTTTAAACAGAATCCAAATTAATCACAGTAAAGGAAGCAAATTTATTCAAAGTAAACTTTGTTTCAGGAGTGCCCCCACTCCAAATGGATTTTAAGACGGAAATGGGAAAGGCTTTTGAGTGATTTCATGGAGAATTATTATCTTTGGAAAAGATTCACGTCAGAATGGCCAACTTCACCTGGGTTTCTGGACTCCCTGGTGCTGCTCCTAACCTGAACTCATTATCTACTGCCATACTGAGGCAAGAGCACTCAGGGTGAATGTAGTCAGGTAGCTTTCAAAGTGATCAAAGTGTTTTCTGTGGTGAGGCCTTTAGTATCTGGCTGGATGCAGAGTATGTTGAAGTGGTAAGTCGGTGATAAGTTTTTCATCATTAACCTTGTTTGCACTTTTGTACACCACTGCTTGCACTAGTATCTTAGTGTAAATTTTAACAATTGTTTTACAGTGTATACAGATTGTTAAGCATTAATTTATATACAGATGTTTCTGTTTACCTTTATGTATTTTACAAAGAACAGCTATAACAGATGGTTAAATGTTCTTGAATTGTGTTTGTGTGTTATTTTGATTATGTTCTATTATCTTTTTACCCCCTATGATTTGAGTGTCAGAAATAGAAAAATAAAATAATTACCTGGTCTTTGAAACACTCTGGTGTCAG EMBV3_28323 ACAGCTGCTTGCCTAGCCGGCACGCCCTGCGACCTGTGGCCTTCCTGACCTGCCTCGGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34852 CATCTTCGCGGTAGCGGCAGCTGTGTCCGCGATCTAGGTGGCCAAGCAAGAGAAGAAGAA Gene GeneID:282847|FAU:NM_174731:473_cdna Constitutive 0 NULL GeneID:282847 29 GENE FAU NULL Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed EMBV3_21122 CCAACGCTACAAATGCTAAAAGTTGCCAGGATCTTCAAAAGGAGATTTCCCTCCTCCAGG Gene GeneID:504721|CCDC68:XM_002697773:327_cdna Constitutive 0 NULL GeneID:504721 24 GENE CCDC68 NULL coiled-coil domain containing 68 EMBV3_10908 TCGTGACGTGCACAACCTCGACTACTACAAAAAGACCACAAACGGCCGCCTGCCCGTGAA Gene GeneID:281769|FGFR3:NM_174318:42_cdna Constitutive 0 NULL GeneID:281769 6 GENE FGFR3 NULL fibroblast growth factor receptor 3 EMBV3_14210 GATCTATTGCAACGTTACCCTATTTTACATTGTTTTCATACTTTTTCCTACCTGTTAGCA Gene BVV0102_392515 - 1 EMBV3_09844 GK000006.2:63128209-63302079 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33137 TCATGATGCTCTTAGCACCGATAATTCATGCTTTCAGCCGTGCCCCCATTCCGATGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33581 ACGGAGGGAGCGGGGCAGCTTCCGGAAAAGGTCATAAGAAGCTGGCCTGGGTGCAGTAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20867 GCTGACGCAGAAGGACTTGGCCACGAAAATCAAGATCGAGAGAGCCATTGGCCTGAAGCT Variant GeneID:515380|EDF1:NM_001035307:38_cdna 391^459 3 EMBV3_27400 GeneID:515380 11 GENE EDF1 MGC127033 endothelial differentiation-related factor 1 EMBV3_12787 ATTGAAATATGTAGTCAGGCAACTGAGGTGTGAATCCCAGGCCAGCCCCTTTGTGCCTGG Gene BVT0102_170132 - 0 NULL GK000007.2:1147083-1273634 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08575 ACGACTTTGACTGTCTCTGCCCCAGCGGCTATGGTGGCAAGACTTGTGAGCTAGTCTTAC Gene GeneID:540262|DLK2:NM_001083494:332_cdna Constitutive 1 NULL GeneID:540262 23 GENE DLK2 MGC151582 delta-like 2 homolog (Drosophila) EMBV3_29327 TTGATCACTGCTTCTTGAACTTCTTCTGGCCAATAATCCAGATTTCTATGCTTGGTGAAG Gene GeneID:514360|DSP:XM_002697598:69_cdna Constitutive 0 NULL GeneID:514360 23 GENE DSP NULL desmoplakin EMBV3_22891 ACTATGAAAAGGAAGGGTAAGTCAGAGGTGGAGGAGAACGGTGCAGTTGAAATCGCTCGG Gene GeneID:282463|PRKAR2B:NM_174649:24_cdna Constitutive 0 NULL GeneID:282463 4 GENE PRKAR2B NULL protein kinase, cAMP-dependent, regulatory, type II, beta EMBV3_16464 GCAGCTTTACAAGGGCTACTTTGGGGATATCTGGGACAAGACGCTGCAGAAGGTTGTAAG Gene GeneID:540007|FAAH:NM_001099102:266_cdna Constitutive 0 NULL GeneID:540007 3 GENE FAAH MGC152273 fatty acid amide hydrolase EMBV3_17747 AAAGTCCAGGAGACTGGGACCCAGCGGTCCCCCGGCGCAGCCCGCGAGGCGGCCACCCAG Gene GeneID:616454|LOC616454:XM_002690018:58_cdna Constitutive 0 NULL GeneID:616454 9 GENE LOC616454 NULL ES cell associated transcript 1 EMBV3_29543 CAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTACCCACCCACCTCATCACTTGCAA Gene GeneID:510991|PARP10:XM_002692548:175_cdna Constitutive 0 NULL GeneID:510991 14 GENE PARP10 NULL poly (ADP-ribose) polymerase family, member 10 EMBV3_37850 AGGAATGGTTCACTGGTAATGCTGCCTATTTGGACTCCTCCTCCTTGAGGCAGGCACTCC Gene BVT0102_029309 + 0 NULL GK000003.2:9409695-9442356 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168360 1 XLOC_103071 NonCoding TCONS_00168360 XLOC_103071 NonCoding NonCoding - 3:9437680-9439724 - TSS126274 765 1 TCONS_00168360_2 135 0.47843137254902 2 0.626529613313754 7.43000431357634e-05 0.000260696279759522 0.000535896377251035 0.000107678917879878 1.44942690487588e-135 6.63175426875994e-06 0.000278104978074434 2.41265001068867e-05 0 1.28824953052057e-11 0 0 1.87534774867601e-05 1.22980034428578e-05 0 0 0 0 0.000637020649151399 0.00121857672570534 2.61838754985592e-05 0 0 0 0.00038374822086401 0.000314472139329698 1.64871519185032e-09 0.000230720417750588 0 0 NM_001105442.2 GPR183 Bos taurus G protein-coupled receptor 183 (GPR183), mRNA. 1e-48 197 83.43 0.235294117647059 0 noncoding GAGGAGGAAGTTGAGGCGCAGGGAGGCACGTGCTTTGCTCATTATGGCACAAAGCATAAAAGTCGAGGATGGGGCTAGGCCACAGGGCATTCTCTCCCCTCCGGCACAACGCTGCTGGTTCTGCTGTGGCCACCACACCACCTCCCTTCTCCCCAGCTCCCTCTCTGCTCTCTTCCCGCTTCTCTCTGGCAAACTAGCATTCAGGGATTGTGACCTTCCTGTCAGCTTCTTTCTCCTGCCTCCAATCCTCACTCAATCAGATTTCAAGAGCTTATGGAAAGGACATAAGAAAGCAAGAGTCAGAAAGAGAAGGCAAAGAAGGCCAGCACCGCACTGGGAAGGAAGGAAGGAATGGCTCACTGGTAATGCTGCCTATTTGGACTCCTCCTCCTTGAGGCAGGCACTCCCACTGCTGGACAGCTCCAGATGTTGCAACGTTTTTTGGAGTTAAAAACCTGTTTCCTGTCACTTCCACCTGCTGGTCTTCATTCTGCCTCCTGGGGCCTCATAGAATGTCTGTTTTTGTTTTTCTTTCAATATTTGAAGATGGGTATCCTATTATCCCTAAGTCCACACTTGTAAAGGGCTTCCCTGGTGGCTCAAACAGTAAAGAATCTGCCGGCAGTGCATGAGACCTGGATTGTTCAATAAATTCAATCCCTGGGTTGGGAAGATCCCTTGGAGAAGGAAATGGCTACCCACTCCCGTATTCTTGCCTGGAAAACTCCATGGACAGAGGACCCTGGTGGGCTACAGTCCATGGGG TCONS_00171918 r 5' 0 TCONS_00171918 r 5' 0 EMBV3_40107 AGGTCTTCAGACGAGTCCAGCCCTGAGAATGCAAAACCAGAATCGCCCCCAGGCCCAGAA Gene GeneID:541217|TMEM90B:NM_001076263:47_cdna Constitutive 0 NULL GeneID:541217 13 GENE TMEM90B MGC143090 transmembrane protein 90B EMBV3_15854 TGCAAGAAGGTGCTCTGAAGTGAGGCTTCTGGTGGACAGCAAAGATGATGAAAGGGTTCC Gene GeneID:510259|SIP1:XM_002696733:47_cdna Constitutive 0 NULL GeneID:510259 21 GENE SIP1 NULL survival of motor neuron protein interacting protein 1 EMBV3_26231 CCCAATGGCATATCTTACACTGGATCACCAACTACAGCCTCTAGCACCATGCCCAAACTC Gene GeneID:529146|MAP3K7:NM_001081595:41_cdna UTR3_Alt 2 NULL GeneID:529146 9 GENE MAP3K7 MGC154981 mitogen-activated protein kinase kinase kinase 7 EMBV3_31092 CTTACAAATAGCCCCACCTATTAGTTATTTCTCAGGGCAAGCAGAGGTCTCCACAGTTGC Gene GeneID:768081|LOC768081:NM_001077136:120_cdna UTR3_Alt 1 NULL GeneID:768081 16 GENE LOC768081 MGC142407 hypothetical protein LOC768081 EMBV3_12094 TTCCCACCCACCTCTACCCAGGTGTTTACCCTGCCTGTGCCCAGGCCAAGGTGGCTCAAA Variant GeneID:508336|CCDC71:NM_001046000:115_cdna 605^946 1 EMBV3_04849 GeneID:508336 22 GENE CCDC71 MGC137942 coiled-coil domain containing 71 EMBV3_03762 CTCAGAAGAAAAGGGCTACAGTTCTTAGCAGGAGAGAGAGCGAGGAGTTGTCAGGAAAGC Gene GeneID:787939|LOC787939:XM_002697501:191_cdna Constitutive 0 NULL GeneID:787939 23 GENE LOC787939 NULL similar to mCG1305 EMBV3_22161 GGTGCCCCAGCTCTGTTCCTGAAAAATGTACAAACCTTCTTGAGAGCATCGGGGTCCAGA Gene GeneID:507427|RIPK3:NM_001101884:89_cdna UTR3_Alt 1 NULL GeneID:507427 10 GENE RIPK3 MGC152488 receptor-interacting serine-threonine kinase 3 EMBV3_05725 GGTTATGGACGCTACATAGAAGGGACAGGATCTGTGTTACAGACAACAGAGGATGTGCAG Gene GeneID:353353|TRDMT1:NM_181812:67_cdna Constitutive 1 NULL GeneID:353353 13 GENE TRDMT1 DNMT2 tRNA aspartic acid methyltransferase 1 EMBV3_18672 TGGCAGCATGTCACGACTTACAGATCACTCCAGGCACAGTAGTTCCCATCGGCTCAATGA Gene GeneID:445419|FZD3:XM_002689474:81_cdna Constitutive 0 NULL GeneID:445419 8 GENE FZD3 NULL frizzled homolog 3 (Drosophila) EMBV3_23772 GGAGTAATTATCTACACGATGTTTATAGGTCTTGTGGTTTTTCAGCTAAGAAGCAGCATC Gene BVT0102_243719 + 0 NULL GK000003.2:83546431-83661013 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170429 TCONS_00170430 TCONS_00173887 TCONS_00173886 TCONS_00170421 TCONS_00170424 TCONS_00170425 TCONS_00170435 TCONS_00173883 TCONS_00173888 TCONS_00170426 TCONS_00173884 TCONS_00173885 TCONS_00173890 TCONS_00170434 TCONS_00170428 TCONS_00170431 TCONS_00170422 TCONS_00173889 TCONS_00170433 TCONS_00170423 TCONS_00170432 TCONS_00173882 2 XLOC_103579 XLOC_104462 Coding TCONS_00173888 XLOC_104462 Coding Coding USP1 3:83658227-83672718 = TSS129157 5936 1 TCONS_00173888_4 612 9 0.59095928226363 0.00206611119872599 0.00173174105459725 0.00123983814214231 0.00137774951477361 0.00113850767836158 0.000521538120433732 0.00081984817806102 0.000669396846632179 0.00366705331550152 0.000516437484243393 0.000582628679714336 0.000235833308647464 0.000318094974520338 0.000861823396016566 0.000446758570610169 0.00158283340880963 2.45830812553177e-33 0.00086409786025766 0.000430843587577652 0.000863445417204864 0.000224097511870467 6.16450224516428e-78 0.000703891457503546 0.000370158001289238 0.000706171525139901 0.000796262936955995 0.000393891679872168 0.000432394374448607 4.82175417205079e-05 3.90613337517197e-05 NM_001046224.1 USP1 Bos taurus ubiquitin specific peptidase 1 (USP1), mRNA. 0.0 4859 99.93 0.454851752021563 NM_003368.4 USP1 Homo sapiens ubiquitin specific peptidase 1 (USP1), transcript 0.0 5128 89.24 0.65633423180593 TCONS_00173888_4 sp|Q29RP1|UBP1_BOVIN UBP1_BOVIN Ubiquitin carboxyl-terminal hydrolase 1; 0.0 1185 99.65 0.944444444444444 2 coding 0 0 1 1 -0.0383728690577405 0.811597380381614 -0.0354180492476993 0.680013489245428 GGGGGTGTGTGTGTGTGTGTGAGGCTCGAGCCCGCCGGCCAGGCCTCTAGCTCCCAGCGCGCGCCCTCAGCGAGGACCCGCGCGAGCTGCCCGTGACGCTGCCTGCGCTGTTTGAAACTGCAGAACCCGTTACGATCTTGGGGCAACTACCGTTCCAGCTGGTTCCGGAGTCGGGGCGTGCCAGAGGGGCGAGTGGCGGTCGCGAGGCGGCTCTGGCCTTTCGCGTCTCTGCAGCGTGGAGACCAGAACCGGCACTTTCGTAGGACGCCGCCTCCAATCGCGGCGCTGGCGCGGGCGGAGGCTAAAACACGGGGGTCCTGAGACAGAGGAAAACGCGCCAAGTTCCCGTCGGTCGTGGAGTGAGGAAGACCCTAGCGGTTCGGGCGCCCGGCTAGCGGAGCCGCTTCTGGCGCTCCTTGCCGTCCCGGGGCGGGGGCGGGCGCGGGAGGGCGCCGCTCCGGGGATGTAGTTGGTGCCCGCGCCAGGCAGGACCGAGCTGCAGCCCGGGTTCCCGCTCTTGAGCGCGAATGGTCACTTCCCCCGGGGAGGGCGATCGGGTCAGCTTTTCTGAGGGTCGGGGGCCCGGGGAAGGGGCTCACCTGTCGCACCCGCACTTAGCGGGTTGGACTCGCCGGCGTCACCGCCGCGGACCTCGCTCTGGGCCATGACCAGATATGATTGGTGATTACAAGATCCCTGTATAAGTTAATTCCTGTCAACTGCTTGGGATTTGAGGAGAAAATGCCTGGTGTCATACCTAGTGAAAGTAATGGGCTTTCAAGAGGTAGTCCATCAAAAAAAAACAGACTTTCCTTGAAGTTTTTTCAGAAAAAGGAAACCAAGAGAGCCTTGGATTTCACAGATTCTCAAGAAAATGAAGAAAAGACTTCTGAATATAAAGGGTCTGAAATTGATCAAGTTGTTCCTGCGGCACAGTCCTCGCCTATAAACTGTGAGAAGAGAGAAAACTTGCTACCATTTGTGGGACTGAATAATCTCGGCAATACTTGTTATCTTAATAGTATACTTCAGGTATTATATTTTTGTCCTGGTTTTAAATCTGGAGTGAAGCACTTATTTAATATTATTTCAAGGAAGAAAGAAGCCCTAAAAGATGAAGCCAATCAAAAAGATAAGGGAAACTGCAAAGAAGATTCTTTGGCAAGTTATGAACTAATATGCAGCTTACAGTCCTTGATCATTTCAGTTGAACAGCTTCAGGCTAGTTTTCTATTAAATCCAGAAAAGTACACTGATGAACTTGCTACTCAGCCAAGGCGACTACTTAACACACTCAGGGAACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAAGTATTACGAGTGTATTTTGGGAAACATTCAAGAAACATGCCAACTCCTAAAAAAAGAAGAAGTAAAAAATGTAGAAGACTTATCTACTAAGGTAGAAGAATATCAGAAAGAGGAAATGAGTGATAATAACAGCATGGAGATGGACAATATGAGGCATTCTGAAGACTATAAAGAAAAACTCTCAAAAGGAAATGGGAAAAGAAAAAGTGATGCTGAATTTGGTAACATGAAAAAAAAAGTTAAAATCTCCAAGGAACACCAGTCTTCGGAAGAAAACCAGAGACAAACCAGATCAAAAAGAAAAGCTGCAGGTGATACATTAGAGATTTCTCATAAAATAATCCCCAAGCACATTTCTGAAAATGAGAGTACAAGACCCTCCCAAAGGAAATCAAAAGTTAAAATAAATTGGTTAAAGTCTGCAGCTAAGCAACCCAGCATTCTTTCCAAGTTCTGTAGTATGGGTAAAATAGCAACAAACCAAGGATCCAAAGGACACTGTAAAGAAAATGAATATGATCTTGAAGAGGACTTGGGGAAGTATGAAAATGATAATACAACTAATGATTGTGAACTTGAGTCTCCAGGAAATAATGATATGCCCATTCATGTTAATGAAGTTAAGCCCATAAACAAAGGTGCAGAGCAAATTGGTTTTGAGCTAGTGGAGAAATTATTTCAAGGTCAGCTGGTATTACGGACTCGTTGCTTAGAATGTGAAAGTTTAACAGAAAGAAGAGAAGATTTTCAAGACATCAGTGTACCAGTGCAAGAAGATGAGCTTTCCAAAGTAGAGGAGAATTCTGAAATTTCTCCAGAGCCAAAAACAGAAATGAAGACCCTGAGATGGGCAATTTCACAATTTGCTTCAGTGGAAAGGATTGTAGGAGAAGATAAATATTTCTGTGAAAACTGCCATCATTATACTGAAGCGGAACGAAGTCTTTTGTTTGACAAAATGCCTGAAGTTATAACTATTCATTTGAAGTGCTTTGCTGCTAGTGGCTTGGAGTTTGACTGTTATGGTGGTGGACTTTCCAAGATCAACACTCCTTTACTGACACCTCTTAAATTGTCACTAGAAGAATGGAGCACAAAGCCAACCAACGACAGCTATGGATTATTTGCAGTTGTGATGCACAGTGGCATTACAATTAGTAGTGGGCACTATACTGCTTCTGTTAAAGTCACTGACCTTAACAGTTTAGAACTAGATAAGGAAAATTTTGTGATCGACCAAACGTGTGAAATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGTAAGGGGTGTGGTTGAAAATTATGACAATGAAGAAGTGTCTATTAGAGTCAGTGGAAATAACCAGCCAAGTAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGACAAAAGAGCAAGGCAGATTACGAGTTATACAACAAAGCGTCTAACCCTGATAAAGTTGCCAGTACAGCACTTCCTGAAAATAGAAATTCTGAGACTAACAATACTAATGGGACCGATGAATCTGATAGTAACAAGGAATCCAGTGACCAAACAGGCATTAACATTAGTGGTTTTGAGAACAAAATTTCATATGTAGTGCAAAGCTTAAAGGAGTATGAGGGGAAATGGTTGCTTTTTGATGATTCTGAAGTGAAAGTTACTGAAGAGAAGGACTTTTTGAATTCTCTTTCCCCTTCTACATCTCCTACATCTACTCCTTACTTGCTATTTTATAAGAAATTATAGAGTGATTGTATTTTCCTTGTGTATATATTAAACAGACATGGATAAACATTGGTAAATTGATTACATCAAAGTAGCTTATCTTTTGAAGCTATTGGATATTATTGGTCTCTAGGTTTTTATATAAATAGTGAAATTTGAATTATTGAAAACCATATTAATTTTTAGAATGCATTTTCCTTAGTAGAGACTAGTGATACATTAGCTTCTGGGAACAAACTTGTATAGGTTCTTAATTGAATTATTCAAAATGGAAGCATTTAAACACTTTTGAATTTACATCTATCTTTTGTGTTTGCTTTTTAAAATAAAGTGCTTGTATTTGTATCTCCATATTTTGGAGTAATTATCTACACGATGTTTATAGGTCTTGTGGTTTTTCAGCTAAGAAGCAGCATCTCATTTCAGTACATACAGTTTTGTAAATCATAAACCAAACCTTAGATGGGCTATATTACAGGCACAAACTCTGGAATATGTATGTATTCACAACTGTACATTTTGTGCCTTGAATCACTTTGAAAAATATCTCAGAAAACCTGTAGTCAGTCCTCTTCTATCTTCAGAATTTTATGTGTATTTACGAAAATAATTCTGAATCCTAGTAAATCTTTTGGGGCATGGACTAATTTGTATTCCTTCATAGTCATACTCTGCACGATCTGTATATAGTACATCAAACTTAGAGGTGAGACCTTAAATTTAACTTTTTTAAAAACCAGGACAATAAAATGTAAACTGCTTAACAACAATGTATACAAATGCTTGAAGAATTTTTTACTTGCATATTTTTTACCATATATATAGCTGGATTCTCTTTAAAAAAAGAATGTGTGTATGTATATATACACACAAACATACTATAAACATATATACATAGAAGAGAATAAACATGCATAATTACCTTTAATAATACTTTCTGACAGTTGGAGGTGAAGAAATTTTCAAATAGAAATTGCGCTTATTGGTCCATCTTAACTGTCATACCTAGTTTTCCTTTAAAGTAGATGTATAACTTTAAGGAATCCAAAACTGGAGAACGTAAGGCTTTAGGCACAGAAAAACTGGGTTAAATTTTTACTTTAAATATTAAATTGGTAAATAATTATGACTTGTTAAAGGACATTCCTGATATTAAGAATATTAAAAATCCAAAGAATATATAATTCTTGGAATAACACTGCTATACCCCACCCACTTCAACAAATAAGAGTACCAGTCACCTAATAATCTATACAGTTAATGTCTTACAAATTCTTTTACAAGATGGTGCGATATAAAAAGTCACAGTTCATACCTCTTTCTACATTCAGAATCAATGGGACCTTTTAAAACTAAGAGCTCAGAACACCGCCCATAAGCGTTGAAGGAGTAGGAGTCACTAATAGACCTTTAAAAATAAAACATCCTTAACATTACTTTATGAGCTCTGATGGAGTAGTTCTAGGACAGAACTTGGGCTTCTGTAACACTCAAGAGACAGCTATGGTTAAGAACTAGTATAGATTGCTGACACAAAAATTTTATCTTTTAAGAAAACTGAAGAACACAGTAAGCTAAGTTAGGAAGTGTTCAGTTATACCAATGTTTTGAGAGGAAGCTTCTTCCTCTCAAATGATGATTGCATGATCATTAAGTCATACAAATCTTTAAAAAGTTCTTGATAGTGACTGAGATGGGTGGCAATCCAAATTCTCATATATGTGTAACCTTATGAGAAATGACCTAGGAATTACTTAATATTCTTCCCCCACCCCCCACCCTTAAGAGGAGACTATGTAAATAAGTTACCTTTTTTTGCTTGCTTTAAAGAGTTTCTGTCCTTGACTCTGCCTTTCCTTATTGTCCATCTGGATCCTCTGTTCTCATATATTTTTGAGGTTATGCTTTTCTGACTCCCTAGTTGACCCATTTTGGTTCACCTGTAACTCACCTGAAAAACCTTTCTGAGATTGTCTTTGAATTGATGTAGGTAAGAGGAATTTTAGATAATATTGCCGGGTTAAAAAGATAGGCTGGAGCAGGGAATATTAGCCATCATATCTACGCTCTTAGAAGAATGAAAGTACCATGTTTGACCAGTTCTTCAGTGATTCATATAAGTGGTCAGTAGATCAAAGGGACAGATTACAAGTGATCTTTCCTAAAACTGCACAAAGAAAAAATGTTCAGACATTTTCAGAAATCCTTAATACACTCTTCCTTAGAAAAGCTTGCCAAATATATGTTGAAAAAAACCTGAATTAGTTTTTCATATCATAAAAGTTGCAATTTAATTAGCTCTCAACTTTAATTGACAGGTAATTTTACCTTTTATACATGTACTTTGTAAAATCTATACAAGTATCAAAAAATATAACTTCTTATTCACCTGATAGATTAAAATCAAACACTAACTCTTATTTTTATGGTGATGTAAATAAGTTTAAAGCAGATTTCTAACATCAGTTTAGATCACTAAAAACCGATGAAATGACTGATGTAATTTGAAACAGGAATCATTCATTTTAGTTGCATAAGAGTAAAAACTGATGAGATGATGGGCTTATTTAATTTGAAACAGGAGTCGTTCATTTTAGTTGCTAAGAGTCAGCTCATACTATCATTATTATAAGGTTGAGTCAGAGATCAAACTGGGTATTAGCTATCCTAGTATATAATCATTTATAGAGAGAAGTTATCAGGTAGTTACTTCTGCAGTTCTAAATACCATTTTGGGGTGTCTGGAAAATACCTTAGAAACCAGTCTGAAGACTTAAGCCAGTTATCAACTTATTTCCACCTATTTATTTAATCTGGAGCTATTATGTGGGCCCATAAAGTGACTGTCAATTATGATTTTCAT EMBV3_22339 GAGACTTGGTAGGGGGTAGCCCGCAGTTCCCAAGACCATAAAGACTGAGTGCTGTTTCCA Gene GeneID:511908|EHD1:NM_001015578:604_cdna Constitutive 1 NULL GeneID:511908 29 GENE EHD1 NULL EH-domain containing 1 EMBV3_24813 ATCCCCAGTAAAGTCTCGGGGCAACCTCTGCACACGGACCCCTCCAAGTGTCGTCATCCA Gene BVT0102_270999 - 1 EMBV3_21522 GK000004.2:64415415-64482710 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19761 CAAAGATAACTTTATGTCAGTTAGATGTAAAGTAGAAAACTTTTCACAGAAAACAACAGT Gene BVV0102_197412 - 1 EMBV3_33647 GK000011.2:95649616-95709410 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41353 GATCCTGCATGTTAATGGGTTTAATGGAGATGAGAAGGCCACCAAAGTGCAGGACATCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38147 AGTGGAAGGAGCTTCTGGTCTCTTGGCTGGGCAGCTGGAGGTGCTTGCTGTAAACAGAAT Gene BVT0102_325562 - 1 EMBV3_16045 GK000014.2:1929355-1930182 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052588 TCONS_00052590 TCONS_00051044 TCONS_00052589 2 XLOC_031510 XLOC_031078 Coding TCONS_00052590 XLOC_031510 Coding Coding CYC1 14:1929277-1932580 j TSS38981 2059 1 TCONS_00052590_2 304 0.0966488586692569 8 0.378861296184131 7.48296196865544e-18 0.000526022273687952 0.000738265512229921 0.000414406323333131 0.0010890543130793 2.57593067869007e-05 0.000197932866340006 0.000114615749204104 0.00098897251474456 1.66371292608691e-05 0.00020596888609235 0.000731925137891693 3.19634734852027e-06 8.81518223058455e-10 2.7113483192033e-05 0.0021394568519151 5.48486248116319e-10 0.000295879785965306 0.000986895814706985 0.000511345327313751 1.61836961404374e-08 0.00016157087585315 2.98251262368542e-08 0.000418753491564741 0.000129091395465139 0.00253550207315123 0.00146593728136455 6.97318751023687e-05 0.000388595408548645 2.68587078406066e-05 NM_001038090.2 CYC1 Bos taurus cytochrome c-1 (CYC1), mRNA. 0.0 1658 100.00 0.445847498785818 NM_001916.3 CYC1 Homo sapiens cytochrome c-1 (CYC1), mRNA. 0.0 1072 85.98 0.443904808159301 TCONS_00052590_2 sp|P00125|CY1_BOVIN CY1_BOVIN Cytochrome c1, heme protein, mitochondrial; 0.0 564 92.92 0.996710526315789 1 coding 1 1 1 1 -0.00642346636085483 0.956410535218611 -0.00470426496112149 0.926124630441706 AGAGGCCGACGGGAGCGGTGGCCGCGCTGAAGAGGGCCAAGATGGCGGCGGCGGCGGCTACGCTTCGCGGGGCGATGGTGGGCCCGCGGGGCGCGGGGCTGCCGGGAGCGCGGGCCCGAGGTCTGCTGTGTGGCGCGCGGCCCGGGCAGCTCCCACTACGGACACCCCAGGCAGTGTCGTTGTCGTCGAAGTCTGGCCTGTCCCGGGGCCGGAAAGTGATTCTGTCAGCGCTGGGCCTGGAGCTGCACCCCCCCAGCTATCCGTGGTCCCACCGTGGCCTCCTCTCCTCCCTGGACCACACCAGCATCCGGAGGGGTTTCCAGGTGTACAAGCAGGTGTGCTCCTCCTGCCACAGCATGGACTATGTGGCCTACCGCCACCTGGTGGGCGTGTGCTACACAGAGGATGAAGCCAAGGCGCTGGCTGAGGAGGTGGAGGTTCAGGACGGCCCCAATGAAGATGGGGAGATGTTCATGCGCCCAGGGAAGCTGTCTGACTACTTCCCCAAACCATACCCCAACCCCGAGGCTGCACGTGCAGCCAACAACGGAGCACTGCCCCCTGACCTCAGCTACATCGTGCGAGCTAGGCACGGTGGTGAGGACTACGTCTTTTCCTTGCTCACCGGCTACTGTGAGCCGCCCACTGGGGTGTCGCTGCGAGAAGGCCTCTACTTCAACCCTTATTTTCCTGGCCAGGCCATTGGCATGGCCCCTCCAATCTACAATGAGGTCTTGGAGTTTGATGATGGCACCCCAGCTACCATGTCCCAGGTAGCCAAGGATGTGTGTACCTTCCTGCGCTGGGCAGCTGAACCAGAACACGACCATCGCAAACGCATGGGGCTTAAGATGCTGCTGATGATGGGCTTGCTTCTGCCCCTGGTCTACGCCATGAAGCGGCATAAGTGGTCAGTCCTCAAGAGCCGAAAGCTGGCCTATCGGCCACCCAAGTGACCCTACCCGGTGTCTGTTTGCTGTCCTGAGCTTCAGGGTCCTCAGGCCCGGGAGCCACACTGGGCCTGCTGAGGTCTCAGGCAGCCCTCCGGCCAAGCCCCTCTTCCTCTGGGACAAGAGGGGGAGGGGCAGGAGCTGGGGCTCCAGTTCCAGATCGTTCAGCGCCCACTGTGGAAATAAATTAAGTTTCTCAACACACCTACCTGAACTATTGTGTGATGGGAGTATAAGTTTGCAGGGGACTCTGGGCTTCTCAAGTGGTGGTAGTGGTAAAGGACCCACCAGATGAGGGTTCAATCTCTGGGTCGGGGAAATCCCCTGTAGGAGGGCATGGCAACCCACTCCAGTATTTTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGCGGGCTACAGTCTATGGGGCCACAAGAATCAGACACAACTGAAGCAACTTAGCATGCATGTGTGTGCGTGCGCGTGCACACACACACACACGATGGGACTGGGACCCTTGCCCTGAGAGCTCCTGGGGGTGCCCAGTGTAGTGTGGTCAGGATTGCCCTGCACGGACTGTTGGCTGAGAGTCCAGTCAGCACTGAATATAGGACAGGAAGCAGAGAACTGGAAAATAGCAACATTAATTAGAGTGGCGAGTACTTGGTCACAGGTGAAAAGGGGGTCCTGAGCCCTGCTGCAGTAATCAGAGTCAAGTAAAACCACTTGACTTTCATCCTGAGGACAGCAGGGGGCCCTGGTGCATATCAACCATGGAGAGGCTGGCCTCAAGTAGGAGCTGCAGGAGTTGATCCTAGGACTGGGGCTGGCTGGGAGAGGCGGGCAGCTCTCAGCCCTGCCAAGAAACAGGCAGGCAGAGGCCAGTGGAAGGAGCTTCTGGTCTCTTGGCTGGGCAGCTGGAGGTGCTTGCTGTAAACAGAATGGTCCCCATCTCTGAGTGGATGGCCCCCCCGCTGGCAGTCCACAGGATGGCTGGGAGTGGCCAGGTTTACACAGCCATGGACCTGTTAGTGGGTGGAGGGCCAGGGCGGTGCTTCTTGGCACTGGCCTGTGGCCCTGGCCAGGGCTCTTTGCTTCAGAGTTTTTCTTGTCCCCAAGCAGGGAGT EMBV3_14599 GACAGTGCTGCAGAAGCCCCCTAAGCCTTCCCACTCGAGTGAGATCAGTCTATCAAAGTA Gene GeneID:511508|PJA2:NM_001100340:5_cdna Constitutive 0 NULL GeneID:511508 7 GENE PJA2 NULL praja ring finger 2 EMBV3_10190 CCAGTTTCTTAGCTGGAAACTTTAATGTCACATAAATGGTAGTATGTCCTGTGTAAGTAC Gene GeneID:530642|DCK:NM_001034573:80_cdna Constitutive 2 NULL GeneID:530642 6 GENE DCK MGC127248 deoxycytidine kinase EMBV3_16048 AGTGAGATTGCACATTAACTACTGTAAGAAGAGGAGCCGCACTGGGAAATGTGAACCGTG Gene GeneID:525378|NACC1:XM_002688745:86_cdna Constitutive 0 NULL GeneID:525378 7 GENE NACC1 BTBD14B nucleus accumbens associated 1, BEN and BTB (POZ) domain containing EMBV3_11921 TGCAGGAATGGCTTGAGACTAAAGGAAGCCCCAAATCACTCATCGACAGAGCAAGCTTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20037 TTCCTTATGGCTCGGCTGCTGTAACACTTGCCTGTAATCAGTGAAGGGCTGTGCACCTTG Gene GeneID:516462|SON:NM_001083694:34_cdna Constitutive 0 NULL GeneID:516462 1 GENE SON NULL SON DNA binding protein EMBV3_31684 CCAGCTCTGTGGCTGGGATGATGGCCCTGGTGATTTTTAGCAGGATCATGTGTTGAAACT Gene GeneID:534017|TMEM63A:NM_001102162:65_cdna Constitutive 0 NULL GeneID:534017 16 GENE TMEM63A MGC166315 transmembrane protein 63A EMBV3_37995 GCTGTGTCTAGTGTCGGAAAACACTGTCCGGGAACTCGGTCTGGCCCATTTTCTATTGGT Gene BVT0102_138642 + 0 NULL GK000006.2:60336534-60420295 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205231 TCONS_00205230 TCONS_00205228 TCONS_00203286 2 XLOC_124613 XLOC_124145 Coding TCONS_00205230 XLOC_124613 NonCoding Coding UBE2K 6:60396528-60420382 x TSS153311 1770 1 TCONS_00205230_1 106 0.294915254237288 2 0.925879344317277 0.00158085648007796 0.00202787532512158 0.00173188850669924 0.00194083738122823 0.000378460623346422 0.000206721029023924 0.000908409195776788 0.00281890660608154 0.000762918978684064 0.000570147621408739 2.96111717422372e-05 5.89551588322731e-05 8.14508349768883e-05 4.94128622068596e-05 0.00033048733451322 0.000596088086004518 0 7.04412980237428e-05 0.00168547998596763 0.00179398478904595 0.000411052733776329 5.16831267715052e-05 9.65528765253015e-06 1.32168788890007e-05 0.00179631072957938 0.00119991391944562 0.00088499865808785 0.000105197596422953 7.65825348519623e-05 1.83045255652249e-05 XR_231383.1 LOC101907812 PREDICTED: Bos taurus uncharacterized LOC101907812 (LOC101907812), 0.0 2453 100.00 0.767796610169492 NM_005339.4 UBE2K Homo sapiens ubiquitin-conjugating enzyme E2K (UBE2K), transcript 2e-146 524 94.66 0.189265536723164 0 noncoding 1 0 1 1 -0.131245904081548 0.601985995021442 0.0256276072676429 0.623849097443435 CCTCGCTCTTCAGCACCTCCTTGAACTCCCGCTTGATTCGCTGCACCGCGATGTTGGCCATGTCTCCGCCCGCAGCTGATTCGTACCCGCCTCCTCCGCCACCGCTACGACCACCGCCACCGCCGCCACCTCTTCCTCCACCGCCTCCTCCCCCGGCGATTCACACCCGAGCACACGAACGCTGCCACTGCCACCCCGACCGCCGCACTATCTTCAATGTGGAATCACCTCCGCGCCCGGCCACCAAAATGGCGCCGGGTCCGCGCATGCGCACGACGCTGACCCGGCCGGGCGGCGCAGCCGCTCCCGTTGTAGCCCCATACGCCTTAGCCGCGAACCTGCGCCGCGCTGTGCGGCGTGTCTCTGCCTGAGCTGCGGCCGCGTGGCTCCGCCCCGTCGGCGTCTGAAGCCAGGAGGGTGCGGCTTCCGCGCGGGCCAGGGCTGCCCGGGCCTCACGGGTCGTCTCCGGCGCCTCCGCCCCTGTACGAATGGAGGTGGTATGGTGGAGGCTTCCAGACCTTCGCCTCTAACCGAAGGTTCGAGTCCAACCTGATGGGTTCACGCGGCCCCTCTAGGCTTGGAGCGCCGCCCTGACTCAGCCAGACCGAGGGCTTAATGTATCCGGCTGTGTCTAGTGTCGGAAAACACTGTCCGGGAACTCGGTCTGGCCCATTTTCTATTGGTTCTGAAAAGCCACTGCGGTTCGTTCTTGTCCTGCAGCCGTTACAGTTCTACTACTGCAGTCATCCCAGGATCTTTCCAGAACTGGGGTCCCCACCCAAGTGGAGGATCGTAACTTCAGGCTGAGCACAAGATTCCTGGAGCACCACTCTATTGGCTCACAACCAACAACCAATCAGAAGAAAGTCATACACCCTGCAGCCCTTGCCCCAAATGTTGCCTTCTCTTTCTAAGGCCAGTGATGGCCATGGGAAAGATTGAAGGCAGGAGGAGAAGAGGACGACAGAAGATGAGATGGTTGGATGGCATCCCTGACTCAATAGGCATGGTTTGAGCAGGATCCAGGAATTGGTGATGGACAGGAAAGCCTGGCGTGCTGCAGTCCATGGGGCAACAAAGAGTTGAACATGACTGAACAACTGAACTGAACTGATGACCATCCTTTTAGGCCTCCTGTTTGGCCCTGTCTGTTTAATCTCTGTGAGGGGCCAACAATTTCAACCTAAATTGCTGTTTTTACAAGGGTAAATGCTAGTTTCAGGCACAGAATACCTTGAGTTAGATCAGGTAAAGAGAGACTTCTGCTCTGGTAGGCAGGCCTCCACCCATACAGAGCAGAAAGAAGTTACAGAAGAAAGAGAACTCCACCCCAATTCCCAAAAAGTATCTTGAGTATAAAGTCTCTCAAGGAGGGGTTGTTCGGGGAAGCACACTGACTGAAACCGCCCACCCTGGCCAGGCACCATAGTAACCATTTGCATGAGTTATTTTACATCAGGAGGCCCTGGTAAGGAACACGGAACTAATAAGCCACCACCAACTGGAAGAATTCGGGAAAGGTCAAAAGGTGACACCACGTGTCCAACCACCTCCCAGAATCCTTCTCGAAGGCATCCATCTTGGCTGAACAATGCATCTGCCACCAGGAAGGACTCTGAGTCAGAATGATTGACTCAGAATCACCATCATAAAACCTGAGACTTCAAGCCACATGGCAGAGCAGTTCTCCTGGGTTCCCTTACCCTCCTGCTCTCCGTCCAGGCGCCCTTTCCCAATAAAATTGCTTGCTTTGTCAACACATGTTTCTCC TCONS_00203286 r 5' 21783 TCONS_00205228 s 5' 0 EMBV3_34197 GAGCGCAGAACTGGAAGGCAATGATGTCATAATGTGCTAGTGAACAGTAAATTGAAATGC Gene BVT0101_061573 + 1 EMBV3_21172 GK000004.2:64364287-64411818 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188094 1 XLOC_114137 NonCoding TCONS_00188094 XLOC_114137 NonCoding NonCoding - 4:64406267-64407177 - TSS140462 910 1 TCONS_00188094_2 60 1 0 0 0 0 3.65016901745803e-05 0 0 0 6.49969615849536e-06 0 0 0 4.32227250521463e-05 0.000618000502021752 7.75383995608254e-05 0 0 0 0 0 0 0 0.000163091627462296 1.00813732777205e-05 0 0 0 0 0 0 0 XM_613802.6 AVL9 PREDICTED: Bos taurus AVL9 homolog (S. cerevisiase) (AVL9), partial 2e-47 194 100.00 0.116483516483516 0 noncoding 0 0 0 0 -0.147213692081506 0.508804780925496 0.0503156619201218 0.510316558065506 CTCAAATATTTATTTTCTTACCTCCAAATATAAGGCCACATTTAAAAACCATATATATTCCACTGCTGTTGCTTGGAATTTTCTAATACTACCCTGAACAATGTCACTTCCTCCTTGGTAACTATGTCATTTTTACTTGAAGGATGAGGAATATATTTTTAAGTGAAGCTGTCTTTAAAACACATACATACACAACTACTTTCATTCCATCATTTTTCTGTCATTATCCTCTAATGAACTGAAATTTTGCCAATCAGTCTTTTAAAATATTACATTTTCTTTGAAATGCTACATTACCTAGCGGTAGCAATCAGCATTTTTATTACTTTAAGCATTTCAATTTACTGTTCACTAGCACATTATGACATCATTGCCTTCCAGTTCTGCGCTCATTAAATAATCCTCTACCTTTGTTCCCCTGCCTTCGATACATAGATTGCAGATGTCCTATTGTTCCCGTTCACCATTTCAGTGAAGAAGCTTAAAAATGACTTAATATTTGCACGTTTCTTTGCTCAGTAAATAACACTTCCCCTCACTGCAACTGAACTGGAGAGTCTACCTCTCATCAAAAGGGAAGATCTGGACAAGACTAAAAAGGAACTCGAAGGCCGAATGGGAAGGGGGGCGGAGTCAGTACATCAGCCCAACAGGGGTTCCAGGGCTTTCACAGATAAACAAAGGAAGTTGATTTTCCCACGGTGCCGCATGTGCTTCGACCATCCTAAGGTACTCGTGCGGAAGCCCAGAGCTCATTACCTTGAAAACGCAGCCCAAGTGCTGATTTTTTTTTTCTAAGGGAATCCCACTAAAAGCAGACAACCAGAAAGTCAACGGAGACCGAGATGGATGAGGAAGAGAGTGGGCCGACCATCGATTCCTTCCTCTGACTCCACAGAAGAACCTAAAT TCONS_00184282 TCONS_00184283 . 3' 21 TCONS_00184282 TCONS_00184283 . 3' 930 EMBV3_09682 AAACTGCGAGAAGATGTTTGACAACGGGAACTTCCGAAGGAAGAGGAAGCGGAGGGGGGA Gene GeneID:613373|FOXI2:XM_002698568:95_cdna Constitutive 0 NULL GeneID:613373 26 GENE FOXI2 NULL forkhead box I2 EMBV3_20777 TGCTGAAGGACATCAAGGACTTGGCAGAAGACATGAAAACTAATAGAGATACCCTGGTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01092 CCTTTCAATCTTGGTTCCGAATTCCCCGAAAAAAGAATACGAGGGATGGCCGGATGGGCC Gene GeneID:519995|BTG4:XM_002692986:141_cdna Constitutive 0 NULL GeneID:519995 15 GENE BTG4 NULL B-cell translocation gene 4 EMBV3_39828 TGCTTCTCACCAGCTGAACCAGACAGCCTGACCATGCAGCAGAACAAGGACTTCTCCAGT Gene BVV0102_167955 + 0 NULL GK000001.2:145178777-145518104 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00011689 1 XLOC_007240 NonCoding TCONS_00011689 XLOC_007240 NonCoding NonCoding - 1:145280054-145280559 - TSS8766 505 1 0 0 0 0 3.28876657030528e-05 0 0 0 0 0 0 0 0 0 0 0 5.23002044444308e-05 0 0 0.000326596671339251 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 CGGTCTCAGCAGGACCAGCCTGGACCATGCTCGGCCAGCGGGGGACAGGGACTGGGTCACTCGGGTCAGCTTGCCCCATGTGAGCAGGACGGGCGGCCCCCAGGCTAGAACAGAGGGTCAGGGAGCCAGGCTGACAGCCGCCCCTTCTCAGGGCTGCTGGACTGCCACACTTCGCTGGATTGTTGGACAAGACAGTGGTTTCTACACCTGGGACACAGCATTCTGTGGAAAGCCGTCCTGAGAGTCAGGATGTGAACGCTCAGCGAGCAGCTCCTGGCCATTGGCCTGAGCCCCTCACCCCTCCTTCCAGCTTTCCCAAACAGCCCTGAGCTACCAGCTGAAACCAGTCACACACCTGCCCCAGAGCAGGCGAGGTCTTTGTCCTTTGTCCCTGACAAGTCCTTCTGCACCATTCTGTCCTACATGTGGCAACTGGAGAAGTCCTTGTTCTGCTGCATGGTCAGGCTGTCTGGTTCAGCTGGTGAGAAGCAGCAAGGCAGCCAGT TCONS_00002466 . 5' 2211 TCONS_00002466 . 5' 2211 EMBV3_20845 GACCCAGGCCGAGGCCACCAGCCTAGGCCGGACCAGGACCAACCCCCATCAGCAGCTGGA Gene GeneID:100335887|LOC100335887:XM_002698108:176_cdna Constitutive 0 NULL GeneID:100335887 25 GENE LOC100335887 NULL hypothetical protein LOC100335887 EMBV3_05874 TTGTAGAAATCTACAGTAGAAGATTACAAGACACATGTGCATGGTAATGCGAGGAGTGCA Variant GeneID:286815|GCH1:XM_002690949:298_cdna 677^761 3 EMBV3_02078 GeneID:286815 10 GENE GCH1 NULL GTP cyclohydrolase 1 EMBV3_23006 TCAACTTCGACAAGGGCGAGACCATGGAGGTGATCGAGAAGCCCGAGAACGACCCCGAGT Gene GeneID:526430|NCK2:NM_001099036:95_cdna UTR3_Alt 2 NULL GeneID:526430 11 GENE NCK2 MGC159894 NCK adaptor protein 2 EMBV3_03261 GCTCAGAGGCTTCCAGGTGCTCTGCTTCTGAAAAAATATGAAGACCCATTGTTCCCTGGG Gene GeneID:535122|C8H9orf91:NM_001024561:44_cdna Constitutive 0 NULL GeneID:535122 8 GENE C8H9orf91 C9orf91 transmembrane protein C9orf91 homolog EMBV3_19730 TTTCTGTATACACGAAGATAAACCAGGGAAGATCTTGTCTTACGCTTGGACACAGATCAC Gene BVT0102_200394 - 1 EMBV3_20124 GK000014.2:23068104-23106219 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41241 GCAATCCAGATGTGGTTTACTCTTGCACAGTTAATGTCACTTACTTCATTTGATGGGGTC Gene GeneID:540689|SPAG9:NM_001076925:159_cdna Constitutive 0 NULL GeneID:540689 19 GENE SPAG9 NULL sperm associated antigen 9 EMBV3_15703 TTCCGCCATATTGTGACAGCTGGTCTGACATCCCCCTGAAAAGTTCTCGTTTGTCGCAAG Gene GeneID:538889|ZBTB25:NM_001164023:181_cdna Constitutive 0 NULL GeneID:538889 10 GENE ZBTB25 NULL zinc finger and BTB domain containing 25 EMBV3_08915 TTGGAGCAAGACATTATACCAAAGCTATTGATAAAGATTGGGAAGATATAAAAAAGATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20482 CTCTCAGAAGGGAAATCTGAAGACCCACGTCCTCTGTGTCCATCGCATGCCTTTTGACAA Gene GeneID:520269|ZNF536:XM_002694850:778_cdna Constitutive 0 NULL GeneID:520269 18 GENE ZNF536 NULL zinc finger protein 536 EMBV3_27815 CTCTGCCAACCCATTCAGATAAGAATTGGGCAAGGGTTTTTACCAGCCCTTTCTTGTCTC Gene BVT0101_035003 + 0 NULL GK000024.2:54715266-54728428 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139376 TCONS_00139377 TCONS_00139378 TCONS_00139379 TCONS_00139374 1 XLOC_084876 Coding TCONS_00139379 XLOC_084876 Coding Coding RAB27B 24:54712589-54721237 j TSS104238 6410 1 TCONS_00139379_7 98 0.0293291731669267 3 0.259049381288308 0.00089343641656522 0.00116461821599542 0.000990265606075402 0.000584711509521855 0.000987960604737775 0.00029243106146483 0.000849066040878675 0.00188636677909145 0.00109869919317937 2.6957688339563e-05 0.00015115861838168 0.000113199570676766 3.04100944037474e-09 0.000162345233404516 7.13800722141326e-05 0.000314876388625786 4.64376841088014e-05 0.000110841973407685 0.000906467713415665 0.0023175735550675 0.000406541699237286 4.67238058730562e-05 2.30794572964618e-05 0.00063577345825296 0.00130659608869279 0.00135887434372032 0.000901064105393532 1.48771209225032e-05 9.84375861810105e-06 8.65530563836616e-07 NM_174738.2 RAB27B Bos taurus RAB27B, member RAS oncogene family (RAB27B), mRNA. 0.0 751 100.00 0.0647425897035881 XM_005266733.1 RAB27B PREDICTED: Homo sapiens RAB27B, member RAS oncogene family (RAB27B), transcript variant X1, mRNA. 0.0 2592 74.82 0.613572542901716 0 coding 0 0 0 0 -0.053386650505922 0.624185721751656 -0.0137293711226429 0.78225947100028 GGCAAGATCCCCTAAAGAAGAGGCCAACTGCAAGCAAATGCTTACTGTGAAAATCCAGATATAGTATTAATTGGCAACAAGGCAGACCTGCCAGACCAGAGGGAAGTCAATGAACGGCAAGCTCGGGACCTGGCTGAAAAATACAGCATACCATATTTTGAAACAAGTGCAGCGACTGGCCAGAATGTGGAAAAAGCTGTGGAAACCCTTCTGGACTTAATAATGAAACGAATGGAACAGTGTGTAGAGAAGACCCACATCCCCGACACAGTCAATGGGAGCAGCTCTGGAAAGCTGGATGGGGAGAAGTCAGCAGAGAAGAAATGTGCCTGTTAGACTTTACCCCAGCCTCTGACCATCCAGAACCCAAGCAAACGTCACTTCCAAAAAGAGCGATAAACCCCACCATTGTTGTTGAATAAACCGTGTATAACGGCATGTCTTTCTTTTCCTGCCAGAAATTTTTAAAAACCTGAATAGTCAACAGAGTTCAGAAGAGTTGACCAGTAATCCCTGAAGCCCCTCCAAACAAGATCAAAGATTTCCCAGTGTCATCGTACCATCATGGGTACTCAATTTGTTTTTTCATAAAGAAGATGAACATAGAAAAGAGTGTAGAAGAAGAGATATCAGTGGGTTTTCCATCAGAACCAAAATTACCTTGTCACACTGGGGACAGGAATAGGTTTCTGAAGGGAGAACACAGAAGGATGACTTTTTTTTAAAGGTTGGATTTACTTGTTATATAGAATCTGATTTGGACTTTTAGGTTTGCATTGAGGGGGACATATTAGCTAAAAGTGCATACACAATAAAGAATTCTAAGTGGTTCATTTAGAGTGACATTACTATGTATATCCTGTAAGCTGTGCTAGAATGACAACATTGCTGATAAGGTTACGAGAGGATGAATGTCAGACATCTGAGAATATGTAGGAGACTGTGTAATCATGCCATTTGTATATTCTTAATAAATGGCAGATAGACAAGAATAGGACTGTGAATGACAGAGGACAAGAAAAAGGCCCAGAGAGAGAGAGATGAAGGTATGGGAAAATGGCATTTGGACAACTGAAATTAAATGTGTCTCTTACAGATGTCTCGGAGAGTTACTTGGCCAAATTTCAGTCAAGCCAATTGGAAGCTGACATTATCGGTTGGCATTAAGAGAGTGCCCAGAGGTTTCCATTTCCAGCACAGTTTTAGAAATTGGTCTAGTGTTCAGCTTCTGGTGTAGTGTTCAGCTTCATATTTCACATTTCTTAGCAAATCATGATAAATAGTCACAAGGAGAAATTAAAGATTGCTGTTTATTAAATATCTCTTTATGAACTCAAGAAAAACTATTTAGCCTTAATTTTTTAGATAAAATATGCTGGTGATATGAAATAAAAAGTGACTATTAATTCTAAGTTTCTAATTTACAAAGTACTAGAAACTGTATCACATCGCTCCCCTCCAGCCTACACCCACCCCTGGCTTTGATTCAACTGTAAAAACATAGCTGTGTCACTTTGTAGATCAACAACTTCAGAATAATGATGGATCAATTTTATGGTCACTGAATTTTCATGTCATTCATCACAAAAATTTGATGATACCTCATGCCATATTGCAGTGTATTTAGCATCTGTTTTTATTTTGCCTGAGGCAAAATACCTATGGGTGAACTATATTTGGGAGTTGGCAGAGATGAATCTCTGTATCCTGTCTCACCAAAATTTGGTTAATGGCTTTATTTTTCCCATAATGCTGTCTTTTCTTTCTAAACATGATCACAAAAGCATTTTCCATTGGCCTATTCTTATGACTGTGTCGAATATTACATTGGTGTTTTATTTTAGCTTCTGATAAACATAAGCCATTCCTTTTAAATTTAAATGTTTCAGTCAAGCTTATCAATGACAAAGTCATCATATTCTGTTTTCTCTGTTTATTATGAGTATATGATTTTTCTAAAGGGTAGTTCCTCTTTGTAGAAAATTTTGCCAATTAAACTGCACTTATCTAGACTCTGTATATTTTTTGTTAAGTTACAAATGTAGGAAGCTCCAAATCCCAGTCCCCCACCTTTAACCTCCTCTATCAACCTCCATCTGGTACAAATCAGATTTTGGAACACAGATCCAAGGGAGTATCCAGCTGTAAGACCTAGACATGTGCCATGAATCAGGTAATTTGGAAGCTTTTAAGTCAGTCCCTTAACAGATTAACACAATCTCAGTGTTGACTGCCCAGGTCCTGGGATTCCTGCATGATGCCAGCTTCTAAAATTGGTCGTGGGGGGGTACTCCCTCCCGTGATGCGTTTCTCTCTGATGCTCTTCATGACCTCAGTGCCTGTGCCAAAAGGATATTAGGTATTAGCTGACATCAGAGATGTTTCCTCTGGAAGGAATATGAGCAAAACCAACATAAGCATTGATGTGGCAAATTTTGGTGAATTCTTGTGGTCATTAAATCGATTTCTCCTTTGGATTCAAATTGTGATGTCCCCTGCATTTCCATAATAGGAAATAATTAGACTTTCTAAAATCCAAGAAGCATTCTATTTTGGATATTTATTTTTTCTATTTATTTTCCAGTTATATGATTGATTTGCTTATGCCAAGATTCTGTCCCTGTCAGTTATTTAACAAGCTTTTTATTTAGGAACTATTTTAAGATTATTATTTGATAGCCATAGCACGAAGCAGAGGGTGATGATGCCTATAATTATAGAACTATTCCTATAAAAATAACAATTATTGGGTAATAATACCAAGAGGAACAAAATTAAAAACAGTCAAGAAAATTATTTTAAAATAGTATTCTACTTATAAATACTTGATCTAAAATATTTTATTCTCTGTTGAGTTTGACTTAACACCCCAAAGTCTATGTAACCATTACTCTTTCATTATTTCAGAATTATTTATTCCATATAATTCATTTTATAATTTTAAATGGATCTGGAGCCATGAAGTATAAGACTGCTTTTGAAGAACTGCATTAACACCCAACAACATGTGTTACTTATTGTCTCCCAAATGCTTTAGTAAGCCATATTTTATTTTGGAGAATTATTTACAATGTACGTGCAGTTCTTTCTGATACAGAAACCATTTCTGAAGTGTTTACACTGGTTTGATGTTTACATTGTCCTAATCAGTGCCTCACATACCTCCACGACCAAATTTGGCTATAGCCACATAGCTCGTTTCCTGTAATACCATGGTGTAGGAAGGGCTCACAGAGACATAAGTGCAGCTAAAGTTATTTTGATGTCTTCAGCAAAGGGTATAAGGATATTATTCGAATCTAAAGATTATTACCACCATCTCTTGGTCACTTTTTGGGAAATGGACATTTCTTGAGACTCTAACTGTGATTAGGTACAAGATTACCTTTTAATAAAATAAAATAATCCTTTGGAAAATGTATCAGAGGGCAGTTGAGAGAACATGTCTGTCTTGTGATGAGGATAAGAAGTCACAGATTAGTAGAAAAAATGCTGAATACTGGAATTTAACTTGTGGGTCTTGACATAAGACTTTTAAAACTCTGGCCAGTGACCACTCTAGCCAAGTTTCTATCATTTCCATATTATCAGCTATCATGCTACAAATAATTCAAAACCAGCATTTTACTAAAGTAAATATTTTCCCTGTTGTTTTTAACCAGATAGGACATTCTGTGTATCAGTGAGTGCTTTTGTTATGTTTGTAGTACAAGTTATTCTCTGCCAACCCATTCAGATAAGAATTGGGCAAGGGTTTTTACCAGCCCTTTCTTGTCTCCTTTGTAAGAGAGAGAAGCTTTGACCATAAAGAAGGACTGACTACATTAAAAAACATTTTAATAACAGCTGAAATATTCTTTAAAGTGTAAATTTTGTGCACTGGGAATCAACAAATTTGATGAAGCTCATACAGTTCTCACCAATGGAGTGGGTGCATTGGGTAGGAGAAACAATATGTGTAGAGAGATATAACTAGGTGTGGTATATAACCTGGAACTACAACTATGAGGGAGAATCCTCAACCATAAAGAATTTTAGAGTTTAAAACTCAAATTGTAAAGAGATCATATCGAAGTTTCTAGTTTCCTAACGTACTTAATAATTTTTTAAAAGGAAGATCTGTGAGCTATGTTAGCCAAAGCAATAGAAAAGTTGTCCTTCACCTTCTACTCCCAAGCTTTAAAGCATTAAAAGATATCTAATGTTTGTGAATATTTTAGGGAAAGCTTTATCATTTTTAAAGATACCAAGATGCTATCTATATTTAAAACTATTGTCTAGGAATTCGCCAAAAGCTATATTTTCTTCTTGATCTTTGACCAAAATGGTATAAGCTTATTTCTGGGAAGAGTGCTGAGCTCTTAAACATGGAAAGTAGATAATATGCTCTGAGTTGAGTGTTGTCTCAATGTTGTATAAATCTACAGAGACACTTGCCTCATAAAGTAGAACTGTTAGATGAATAGGAATTTTATGAACTTATTGCCTTGGAGTTCTTGGGTAAAGACCCAACCAGGATGACACTGTTGAGTGAGAACCATAAAGAAAGATTAGAGATTCAAGTTGTCTAAATAGAGTTTATAACTATGGGAGAATATGGAGAAGACCATACTTAAAAGGTTGATTTTTATGTAGGGAAAAAAAAATAGAGAAAGGGTTATATATTTGGGGCTTCCCTTTTAGCTCAGTCGGTAAAGAATCTGCCTGCAAGGCAGGAGACCTGGGTTGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGAGAGAGGAGCCTGACTGGCTACAGTCTATGGGGTTGCCAAGAGTCAGACATGACTTAGTGACTAAACCAGCACCATGGCAAATATTTACCTATTATTTTTATCTTCCAAGTAGAAGTTTAGGCCCTTAGAACTAAGCTAATAAAAATATTTAAATACCAAATATTTCATGATTGGCATCAAAATTTGAGATGCTTAGACCCATTTTATTTATCCTATCTGAATCTAATTTCCTCATAAATTGCACTTTAATTTTTTAAGAAGTAGCATCACAAAGGCCTTTCTGCAGAGCTCTTTTTCCGTATTTAGTGAGAATAACAGGCAAACAAACAAAAAGATGAGTACCAAAATAACATGGTTATTTAAAAACTTGTCATCTTTCAAGGAAAAAAAAATGAAGAAATCATCTTTGAATTATTTAAATTTGTTCCCCAGTTCCTTTTCTTTCCAACAGGTCTTGGAAGTCATGGCTATTATCCCTCAGCAGACTTAGTCATTGGCAAATTCTGTTGGAGCTGCATGCCTGTTCTTATCCTAATGGATCCCTTATTTAACCAATGGCTATTACTGACATATCAAAATATTATTCATCCCTAGCAAAGCAATAACACATGCTTATCCTTACTCTTCTCTTCTCTAGGTTATTTTTTCAAGCACTCTTTGAAAGGAAGACTAGTATTATAGAAAGGAAAGTGTCCAGATAGAGGAATTTGGGAGCTGTGGGTATGTCATTAAATATGGCTTCTCCTCGTATGGGGCTTATAAATCCTGTGTAACTCACAGGGTTCATATCAGGCTCCAAAGAGAACATATGTAGAAACTGGTTTATAAATTAAATTCCATTTCACAAACTGACACTATTATCCCAAGCTAAGAATAATAAAAATATCACAGTCATACTTTCACAACCATATGTTCACAAGTGTTATAGAAGGCACAAAACACTAATTCTAGTAGAGATACTGGGAACTTGAAATGGATAGTCAGCTCTGGTCATTGTCTTTGATTGAAAATGTTTAATATATCTCAAGTTATTGAAAAAACAAATATGAGTTCTATTTCATTCTGTAGGTCATTTTGTATTTCTTTCAAGGAATCCAATTACATTCTACATAGTATATTAAAATTTGGTCAAAATCCTCCTTGTATAAACACGGCTTTGTGTCCACAACCTTGTGAAAGATACTGACTGTATCTGAAATTATTTGAGGAAAGTAAGTTATCCTGCTTAATGTGTTAAAAGTAGACAACATTTTGGCCTAACACTGAAGTGCTTCACTGTATCTCAACAGTCTACATTTAAGTGATATTATCCTCATTTTTAGGCTAAGCACGTTCGATTGTTTTGTCTGTCATCTACTCAGATCTCTGTTTTGTCTAGTGCTATGAATGTAAATTAAAACCTTAAACATGGAGTTTTTATTCTCTGTGCCCCTGAATAGACTGTGGTGCCTGACAGACTGTCAGGGCATCATTTTGTTGTACCAAAGTTCTAGTAGCTTCAGAAATCAGAGCATCCAATGATTTTGTGGTGTGTGGGTTTAAATATTACAGTTGAGAACTGTATTCAGTGATTGTTTCCGCACACTTTTCAAATAAAAATGCATTTTTATCATTATT EMBV3_13159 TTCAGGAAATCCTCAGCTCAAAACTACTACAAAAGGCCTTTACAAAAAGGTATACATTCA Gene GeneID:282023|PTGS2:NM_174445:16_cdna Constitutive 2 NULL GeneID:282023 16 GENE PTGS2 NULL prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) EMBV3_38930 AGCCATGTACTGAGACCAGCAGATCAGAGACAGCTCCGCCCACAGAACAAGGGGTTAAAA Gene GeneID:618635|LOC618635:XM_002699451:180_cdna Constitutive 0 NULL GeneID:618635 29 GENE LOC618635 NULL similar to secretory mucin MUC6 EMBV3_09838 AGGGGGCTGCTGAAGGCTGGCTCTTCTGGGATGATGGGCAAAGCATTGATACCTATGAAA Gene GeneID:100336421|LOC100336421:XM_002687081:251_cdna Constitutive 0 NULL GeneID:100336421 4 GENE LOC100336421 NULL maltase-glucoamylase-like EMBV3_16200 AGCTGGCCAAGGAACACGACCTGATCTTCTACGAATGCAGCGCCTATTCTGGTCACAACA Gene GeneID:525377|EFCAB4B:XM_002687891:86_cdna Constitutive 0 NULL GeneID:525377 5 GENE EFCAB4B NULL EF-hand calcium binding domain 4B EMBV3_05447 TCAGTCATGATTTAGTTCAGGAAGCTGTTGACCATGCACGGAACCTTCAGCAAGAGGCTG Gene GeneID:529670|LAMA4:XM_002690104:20_cdna Constitutive 0 NULL GeneID:529670 9 GENE LAMA4 NULL laminin, alpha 4 EMBV3_39839 CCTGGTTCCTCTTCATTACAGGTTGGCTGTGGTCCAGTGTGTTGCTGTTATCTGGAACTC Gene GeneID:505763|MPV17:NM_001045929:57_cdna Constitutive 2 NULL GeneID:505763 11 GENE MPV17 MGC137578 MpV17 mitochondrial inner membrane protein EMBV3_18963 ATCTCCGGGAACAACAAGTACATCGTGACAGGCTCTGGGGACAAGAAGGCCACTGTGTAT Gene GeneID:533595|TLE2:XM_002688945:35_cdna Constitutive 0 NULL GeneID:533595 7 GENE TLE2 NULL transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila) EMBV3_26128 GGCATCTGCTGGAGAGTCTTCTCTTGCTTACGCTCAGTTGTTTAAGCTAGAATTTGGGTG Gene BVV0102_059410 - 1 EMBV3_06239 GK000005.2:37604225-38269276 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15168 TGTCTACTGCACACCTGTCTGCTGTGAGTCCTCCCCTTGCTCAGCCTCCTTGTGCTGCCA Gene GeneID:100300014|LOC100300014:XM_002685142:93_cdna Constitutive 0 NULL GeneID:100300014 1 GENE LOC100300014 NULL hypothetical protein LOC100300014 EMBV3_28404 GAGTCTACCAGTGCAACGCTAATCTCATCTGGAAACACCTTCACAGCCACTCCCAGAAAC Gene BVT0102_016540 + 0 NULL GK000013.2:81862981-82162221 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044202 1 XLOC_026149 NonCoding TCONS_00044202 XLOC_026149 NonCoding NonCoding LOC100848004 13:82063505-82089920 j TSS32540 952 2 TCONS_00044202_2 179 0.701680672268908 3 0.964072082986295 1.76892663157559e-05 0.000137216053556471 0.000395323984931828 0.000197974904233715 4.57201149448683e-05 0.000289320590609525 7.96346779737874e-05 0.00014966622880319 0.000314942654548528 6.15599160881711e-05 3.06726029799492e-06 0 3.01395173894358e-06 1.97647122154513e-05 5.53084975854921e-54 0 0 0 0.00138293341794581 0.000541894641948064 1.51506368551507e-05 0 0 0 2.30575376941309e-05 0.000107818060362271 0.000200846378251188 1.5793924697504e-12 8.87477956628719e-12 0 NM_001193192.1 LOC618516 Bos taurus tumor necrosis factor receptor superfamily member 13C-like (LOC618516), mRNA. 2e-27 127 90.53 0.0976890756302521 0 noncoding AGCTCGCATGTCGTATGTTTGTCGAAGACAGACTCTCATTTGCTTTTTAAAGCAGCTGAGTCTCGTTCCGTTGGCTCTGAGGACACCGGGCGGGAGGCCCCTGCTGGCGCCCCTCTTGGAAGGATGCCTGACTGCTTTCCTCTCAAGTCAGGGAAAAGGAAGACAAGTAGAACCAGGACCTCTTTTCCTTTTCAACACAACAGACCTGTCCAGGACTCTCCCAGAAACCTCCTGTTGCTGCTTCACTGGCCTGAACTATGTCACGTGGCCAGGGTGGAGGGAGATGCAGAAGACTGCGGGTTCGCTCCCCGGGTTGGGAAGATCCCCTGGAGGAGGAAATGGCAACCCACCCCAGTGTCTTGCCTGGAGAGTCCCGTGGACAGAGGAGCAGGTGGCGAGGAGTCATTCACGACTGAGCGTGCAGGCACGCGTCCTGGTCACCATCCCTTTGTGGAGATGGAGCATTTCTTTTATGTTATCTCTGTCAGTGTCAGTATTTCTTTTTCCTGGGTGGTCACATCATCTATTCCTCTTCAGCAGGTTGTGATGATTAATTTTGTGTGTCAGCAAGATCGCGGGTTGCCCAGATATTGGTTCCATGCTGTTTCTGGGAATGGCTGTGAAGGTGTTTCCAGATGAGATTAGCGTTGCACTGGTAGACTCAGGGAAGCAGCGTGCCCTCCTCAGTCTGGGTGCACCTCATCCAGTCCCTTGAGTGACTGAACAGAACAGAACAGCAGAGGAGGAAGAGTTTGGCTCTTCCTGACTCCTGGCTTAAGCTGGGACATTGATCTTCCTGCCCTGAGTCCTCCTGTTTCTCAGGCCTTTGGACTCAGCCTGGAACCATACCCCCGGCTCTCCTGGGCTGCCAGTTTCTAGACAGAATCACTCAACCTTTCAGTCTCCATAACTGCATGAGTCAATTTCCTCATAATAAATCTCTTCCTATACA EMBV3_37341 TGCCCTGGTGGAAACTGTGTCTGTGTTGCAGCTGTCACTGTGTGGAAGTGGTGTCATCAA Gene GeneID:789938|LOC789938:XM_002689891:46_cdna Constitutive 0 NULL GeneID:789938 8 GENE LOC789938 NULL similar to cOR13F4 olfactory receptor family 13 subfamily F-like EMBV3_16188 GTCGTGCTGGTGATGGCCTACGGGAGCCTGGACTTAAAAGAGGAGATAGATATCCGACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39990 TACTGAAGTTTCGAGGAGATGGTGAAAAGAATAAGGTGCAGACTCCTCCCACCCTTCGGG Gene GeneID:784495|LOC784495:NM_001105639:1390_cdna Constitutive 0 NULL GeneID:784495 13 GENE LOC784495 MGC148315 hypothetical protein LOC784495 EMBV3_36230 CAGGTAACTCTTTCTGGTGGGGGCCTGTCCGTGTATTGTAGGATGTTTAGCCGCATCCCT Gene BVV0102_446727 + 0 NULL GK000020.2:25975527-25984554 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114863 TCONS_00114864 TCONS_00114865 1 XLOC_069376 Coding TCONS_00114863 XLOC_069376 Coding Coding ITGA2 20:25980235-25997490 j TSS85558 5130 1 TCONS_00114863_1 196 0.0966861598440546 8 0.703141300567984 3.99284107104228e-05 2.16616155879422e-05 5.8884673143264e-05 5.43014094634945e-32 2.57259776040491e-05 4.03326547620489e-17 1.21087995235854e-06 0.000300882596973457 2.86036089405974e-05 1.63944153520466e-09 1.12041363597544e-05 1.74253281933568e-05 1.36253678663056e-06 2.69640137896108e-05 5.62349955367223e-14 0.000684669108741455 0.000209490337983019 1.47555374539488e-07 7.48577444052873e-06 4.72756012914081e-05 1.06812412513468e-13 0.000154236024224387 0.00036977448209534 0.000468413380030909 4.22398051802479e-28 4.56927321597537e-05 1.07549966501799e-06 4.33699270400195e-05 1.41333865163175e-65 1.91106493801502e-53 XM_005221518.1 MOCS2 PREDICTED: Bos taurus molybdenum cofactor synthesis 2 (MOCS2), 0.0 5460 100.00 0.589863547758285 NM_002203.3 ITGA2 Homo sapiens integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) (ITGA2), transcript variant 1, mRNA. 0.0 1276 70.35 0.523976608187135 TCONS_00114863_1 sp|P53710|ITA2_BOVIN ITA2_BOVIN Integrin alpha-2; 5e-135 410 100.00 0.994897959183674 0 coding 0 0 0 0 0.018166175243705 0.885080179532649 -0.00110921637027386 0.986780603356012 ATTCCCAGAAATGAGTGAAGAGAGGGAATGATCTACCAACATAAATTTTTATGAAGTCTCCTTGGATGGGAATGTTTCTTCTGTCGTGCACAGTTTTGAAGATATTGGTCCAAAATTCATCTTCTCCATTAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCATCTGTGATCATCCACATCCCTCAATACACCAAAGACAAGAACCCACTGATGTACCTGACCGGGGTGCACACAGATCAGGCTGGTGACATCAGTTGCGAAGCCGAAATAAATCCACTGAAAATAGGACAGACGTCTTCTTCTGTATCTTTCAAGAGTGAAAATTTCCGGCACATAAAAGAATTGAACTGTAGAACCGCTTCATGCAGTAACATCATGTGCTGGCTGAGAGACCTTCAGGTGAAAGGAGAATACTTCCTTAATGTGTCCACCAGGATTTGGAATGGGACTTTCGCAGCATCGACTTTCCAGACAGTACAGTTGACAGCAGCTGCAGAAATTGACACATATAACCCTCAGATATACGTGATCGAAGAAAACACGGTGACGATTCCCCTTACGATAATGAAACCCCATGAGAAAGTTGAAGTACCGACTGGAGTGATAGTAGGAAGTGTAATCGCTGGAATCCTTTTGCTATTAGCTCTAGTTGCAATTTTATGGAAGCTTGGATTCTTCAAAAGAAAATATGAAAAAATGGCCAAAAATCCAGATGAAACCGATGAGACCACAGAACTCAACAGCTGAATCACCCAGCAGCTCCCACCAGAGTGGGTAGCAGCAGCAGTACAGCCAGAGGTTACTATTCACATGAATGGTTTTTTTTTTTTAATACCAGGGTAACTTAATAATGTAATAATTAAAACAGAACTGCAGGTCAGTTTGGAAAGAAATTGTGAGGGGATTGGGAGGGCAGGGGTACAAAGGGTAAAAGACTTATTTTATATGGAGGAAAAAGTGCTCTTTACCGCTGGCTGGTCCAGAGTACATTATCATGTACATTGTATCTGAAGCATGACATGTTTCCAAACAGGAGAAGTCTTAAGAGAAAAATACAACCTTTGGGGGCGGGGGAACCCAATTATTTAAAACGACTGTTTTTAAACAAGTGGAAGTAGTAGGTGTAGATACATCATTAACTTGGATTTTGATACTGTTGGGGGAAAAAAACAGGTCAACTTTTGCTGCTTGTCCAAAGTTGCCACAGAGGATATTTTCAGTGATAATTTTGTTTATAAATGAGGTAAAACTTGCTGTTGTCAGCCCACAGCTGTTTCCCAGGGTCCCGTTTCTTGTGATGATGTGCTTATCAAAACATGCTTGATGACTGGTAGGAGCCTCCTGCAGACGGAATCTCCTCTTAAGTGGTGGAGGGTTAGGGGCCTAAAGGGTTTAGAGGCCACAGCACTAACTTTTGTTTAGCATCTATAACATTTATAGTAAAATCTTGTCTGCTGGAGTCCCCGCTGGGAAGAAGGAAGACATTTCCTTTCTCCTTTAGGATGAAAACTGGCTGACCTGGCTGGCACCTTGTCAATTTTTGAAATTTGAGTAATTGCTTTGGAATCCTTTCTGCTTCCACAATGAACCTCTCCCATGTCCTGGTGCCTCATATTCTGCAAGCCTGCAGCTGCCCACCTTCCTCTCCAGGAGTCTGGAGTTTTCCACCCTCCTGGGACTCTTGTCCAAACCTCCACTCCCAGGGCAGGGGCTCTTCCCCAGGTGTGAGGAGGAAGTTATCCGTTCCACTTCCCACACTTGCGTGAGTTACTGTATAATCCCCTTAACTTCAGGGAGCTGTTTTCAGTTGGCTAAACATGTAAGAAAAATTAAGTCCAAGTGAACTTCTAATTGTTGATATTTCAGGCAGGGTAAACAAGGTAAAATATAAATAATCTCAGGAATTTGCAGGAAATTACAAGACCTTAGAAACCACCTAGTAAGCACCTACTGTGCTTGGTTCTGGAGAACTTACATTTCCAGAATAATGACTTTAACCTGGGAGTTTGCTCACCAGAGAGTCTCAGGCCCCAATTCCTGATAATCTTATTTAGTCATCAAATTGGGATGAAGCCTGATGACCTGTATTTTAACAAGGGTCCAGGTCCTTATGATGTAAACGGGCCACCTTGTGGAACACCATCCATTCCTCCGCTGCACCTTCTTTTCTCTGTTAGTTTCTAGGTTCATCCTCTAGGCAGGCGTGAGAGAGAAAGCGCAGAGGCAAAGGCTGTGGGGACTATTTTCTGTCAGAAAATACATACTTAAAGCTTCAGACAAGTCGCTCAGGCCCTGAAACTTCAGCGTCCTCGTTATAAAATGGGGGGCACTGGGGTAGAGCTCAGTAGTGACACTTTCAACTTTTAAAAACCCATTGTCTGGGTTTCTTATAACACAAATAGACAATCCTCCCAGAATGTGACTCGGAAGTCAGGAAAGCAGGCACGTGCCCGCGTGCGTGTCTCTGATGGTGGCGCAGGGCTGTCTGCACAGTTCCGGGATTCATTTTGCGTCTGACGAAACAAAGGGAAAAGAAACAATTGGCAAAAAAATGTCAGGGGTTTGTAACAAAAATGACATTGTATTCTCTAGTTAACATGTGCTAGAGCCCAATTCTTGTAACAGCTGTGTGGACTCACACTGTTTCATTCCAAGGAGTGTTTAAAAAAAGAACGGAGGGGAAACTGGTCATTACGTTGATAAAGACTATTTAATAAACTGGGTAACCGCTGTATATATATGTATACTAGTTCTTCAAAGTAATATACTAAGAACTACAGCATGTCATTCTCCTTTATTCTGCCTCTAAGCTTCCTCAGATAAACACTAGACAGAGGTCACATGCCCACAGCCAGCTGGTGAGCTCTGGTGAGCCTCGCCTTAGATGAGTGGCCTTGAAGGCACTGTTTCCATGAAGGAGCTGGATTACTGCAAACTTAAGAAGCCAGCCACTCGTCTCTGCGCCATTTATCTCGCTGGGGTAGGGTCTCTCAGCCCTGGCTCTACAGACACTGGGGCCAGGTAACTCTTTCTGGTGGGGGCCTGTCCGTGTATTGTAGGATGTTTAGCCGCATCCCTGGCCTCGGCCTACAGCTCTACCTACCCGCATCAGAGGCACCCTCTCCCCCTCGTGGCAATCAAAAAATGTCTCAGACACTGGCTGACGCTTCCTGGAAGGTACAGTCGCTCCAGCTGAGAACCACTGCACGAGAGCACGTGGCCTAAATATACAGCTTCTGTCACCAGACAACGGGTCTAAGGCAGAGGTGCCACTGAGTAGTGTTCCTTGAGCACTTTTAAGCAAAGGTTGAAGAGTCATCCAAGATATTTAAAAATTGTTTAAAAAAAAAAAAAAAAAAGCTCTGTATTCCTATTCAGCCATACTTTTGTTTTAAAAGTAAGTAGAATATAGGGCTTAAAAGATGTCATCTTAAAGTTTCCATTTCATAAATGGTATATAGACAGTGTGTATAGAATAGGGTAAGAACTGAGTTGCTTCATGCATGGCTGCCATACAAGCTTTATAAAATAATAAAGTAAAACAGTCTAAAGAAACTGCATTGAAATTTGAATTTTGTGCGTCGTTCACTTCAGCAGCAAACTGAGAAACTGGACAGATTCCTAACTGGATGTGTTTTTATAAAATAGTGAACATTATTAACTGTGAAAAAAAAGTGGAAACCAATTTATCATAATCACACAAGTGATTATCCTAATGGTTATTACACAAGTAGTTATTATAAAAGGTGTAATTTTATAGTGTTATCTATTCTGATATACAGTTATAACTTAATATATGACAATCTCATAAATTAAGATATCATAAGCATTAAACAGGATTCCTCAAACTTCTCTCCCTGGTCCATCTTTAATACAGTTTGCACATAGAAAATAATCATATACATGACTTTCAGGAGTATGCCCTCATTAATGCACACTCATTCTAATCAGTTAGAAAGACTAACCATGTAGGGGAAGAAAGTATATATGGGGGCAGTGTCTGAAACAAAATGTTGACTGTTTGAACCTTAAAGAATGAAAATGTAGCCATTATGTAAATATTAAAAAATGGTTTCATACCTGGTTTATTTTGGCAGATAAAGTCAAAATGTAAATGTATATATTGCACAACTATGCTAAATTGTATATTTTTTAAAGACAAATTGTCTTGGATAGTTTCCTTCATACATAATGTATAAATCTTTAAGAATATTTGCTGTTTTGATTAACTGGTTTTTGTCTTTTTTTCTCTCCACCAAAAATATAAAAATGAATGTATGCATGTTTGTACATGAAGTGTCACACAGTTCATTTGATTTCTAAGAAACAACCAAATTGGAGCAATAATCAACATTAGTTAAGAGCTTTTCTCCTATTAAAGTATGAGAATCAAACAGAAGAGTATTATTCAAATGTAAACTACTCTTTACAGAGCACATTACTGAATATCATTAAAATCATTTTGAAAATAAAGCTATTCACTTTGGAATTTGAACTTTATGACTTATGGATCTCACTGTATTTATCTTGTACACTCACTGTGCTTGAGAACAGTCAGTCAAGACTCAGTTATAAGAGTGAGGATGTATCTCACCACTTATAACAGCAGTGGCCACAAGGATGTTCTGCAGGCAACAAGCCGCCTGCAGTTTAGAGACGAGGTGTAAAGCCTTGCTCCTCAGTGTGGTTGACAGGCGGGCAGCATTTGCATCACCTGGAGCCTGTTACAAAATGGAGCTCTCAGGTGCCATGCAGAACTGAATTCCAACTGGAAGTTTAATAAGATCACCAGATGATTTGCAGTATGCTACAGTTTGAGAAGCGTCACTCTAAAGCACAACTTATCTCTAGAAAGAAACATGTGTCTGAAACAGAAAAAAAGAGTCAAAACTACTGCAGCCTACACGAGCAGTCATCTGCATAGTTTAAAAAAATTTTTAATAGAGCATTTACATACTCTTAAGAATTAAATAAGCTGAAATGAATGTGCTGAAATTGTAAAACAAGAAATTGTAAAACAAGACACATATCAGGTTCAGAGACTGGCTGTCACTGCATAGATGGTACACTGATGCAAAGGCTGAGGGGTAGGTGCTGCCTTTCACAACCTGTGCACAAATAGCTCT EMBV3_35290 GAACGACAGTGCGAGCGGTGGGAGAAAGAAGCAGGGAGGGGAAGAAGAAGGGCCTAGGGA Gene BVV0102_225441 + 0 NULL GK000009.2:64689446-64722262 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235749 TCONS_00235748 TCONS_00235754 TCONS_00235751 TCONS_00235747 TCONS_00235745 TCONS_00235752 TCONS_00235746 TCONS_00235753 TCONS_00235750 1 XLOC_144294 Coding TCONS_00235749 XLOC_144294 Coding Coding SYNCRIP 9:64721828-64765192 j TSS176619 2130 1 TCONS_00235749_3 410 12 0.951156515923714 0.00179572008396709 0.00223662601017548 0.00299187497847652 0.00216576226681288 0.00214005179325782 0.000362317293445771 0.00143901741171333 0.00402925706136679 0.00255247970290197 0.000630097956887883 0.000136069476501307 0.000136990371218154 0.000686484450985487 0.00175503022004209 0.00148318021670663 0.00178169068667453 0.000320821121303522 2.42266656135378e-113 0.00387390527947144 0.00528141186589851 0.00100473941335005 0.000337071332961721 4.35042835981514e-11 9.14600682588949e-41 0.00256640638215362 0.00343568032397415 0.00437072825523618 0.000155949226187436 0.000509688377962819 0.000716991397013348 XM_003582613.2 SYNCRIP PREDICTED: Bos taurus synaptotagmin binding, cytoplasmic RNA interacting protein (SYNCRIP), transcript variant X3, mRNA. 0.0 2987 98.48 0.790610328638498 XM_005248636.1 SYNCRIP PREDICTED: Homo sapiens synaptotagmin binding, cytoplasmic RNA interacting protein (SYNCRIP), transcript variant X2, mRNA. 0.0 3009 92.42 0.938028169014084 TCONS_00235749_3 sp|O60506|HNRPQ_HUMAN HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; 0.0 798 99.48 0.94390243902439 3 coding 1 1 1 1 0.0642745305911335 0.558619774060655 0.0724440924914235 0.318864532268117 GGAACCCGCGGGCGCGCGTCCCGAGGCGTAGGCTACGTCGTCACGTCAGCGCGGGAGAGAGAAAGACAGGAGCCGACTCGGCAGGGACTGGGGGACGGGGCCGAGAGAACGAGCGAGGGAGGGAGCGAGTGAGCAAGCGTGCATCTAGGAGGGGAAGGGCGGCCACTTGTGCTGGAGCGGCCGCGAACGACAGTGCGAGCGGTGGGAGAAAGAAGCAGGGAGGGGAAGAAGAAGGGCCTAGGGAAGAGGGCTGACGGAGACTGGTGGTGGTGGGAGAAGGAGAAGGAGGAGCTGGAGGAGGGCAGGAGCTGAGAGAGTGAGTGAGAGAAGCGGACGCGCGAGGGAGGGGAGGAAAGGAGGGGGGTCACGCGGAGGCGCGCGCGCGCACCGGGAGCGCGCTCGGAGGCGAGTGGAACTGGATCGGGTTTGCTGCCAGCGGCGTGAGCTTCGGCCGCCATTTTACAACAGCTCCACTCGCGCCGGACACAGGGAGCAGCGAGCACGCGTTGCCCGCAACCGGATCTCCTCGGACAGGATTCCTCCGCCGCAGCCCAACGGGGAGGGCTGGTTGCACATAGCGATTTAGATGAAAGAGCTATCGAAGCTTTAAAAGAATTCAATGAAGACGGCGCATTGGCAGTTCTTCAGCAGTTTAAAGACAGTGATCTCTCTCATGTTCAGAACAAAAGTGCCTTTTTATGTGGAGTCATGAAGACTTATAGGCAGAGAGAAAAACAGGGGACCAAAGTTGCAGATTCTAGCAAAGGACCAGATGAAGCAAAAATTAAGGCACTCTTGGAAAGAACAGGCTACACACTCGATGTGACCACTGGACAGAGGAAGTATGGGGGACCGCCTCCAGATTCCGTTTATTCAGATATTTGTGGGGAAGATTCCAAGAGATCTGTTTGAGGATGAACTTGTTCCATTGTTTGAAAAAGCTGGACCTATATGGGATCTTCGTTTAATGATGGATCCACTAACAGGTCTCAATAGAGGTTATGCGTTTGTCACTTTTTGTACAAAAGAAGCAGCTCAGGAGGCTGTTAAACTGTATAATAATCACGAAATTCGTTCTGGAAAACACATTGGTGTCTGCATCTCGGTTGCCAACAACAGGCTTTTTGTGGGCTCTATTCCTAAGAGTAAAACCAAGGAACAGATTCTTGAAGAATTTAGCAAAGTAACAGAGGGTCTTACAGACGTCATTTTATACCACCAACCAGACGACAAGAAAAAAAACAGAGGCTTTTGTTTCCTTGAATATGAAGATCACAAAACAGCTGCGCAGGCAAGACGTAGGTTAATGAGTGGTAAAGTCAAGGTCTGGGGAAATGTTGGAACTGTTGAATGGGCTGATCCTATAGAAGACCCCGATCCTGAGGTTATGGCAAAGGTAAAAGTGCTGTTTGTACGCAACCTGGCTAATACTGTAACAGAAGAGATTTTAGAAAAGGCATTTAGTCAGTTTGGGAAACTGGAACGAGTGAAGAAATTAAAAGATTATGCTTTCATTCATTTTGATGAACGAGATGGTGCTGTCAAGGCTATGGAAGAAATGAATGGCAAAGACTTGGAGGGAGAAAATATTGAAATTGTTTTTGCTAAGCCACCAGATCAGAAAAGGAAAGAAAGAAAAGCTCAGAGGCAAGCTGCAAAGAATCAAATGTATGATGATTACTACTATTATGGTCCGCCTCATATGCCCCCTCCAACAAGAGGTCGAGGGCGTGGAGGCAGAGGTGGTTATGGATATCCTCCAGATTATTACGGATATGAAGATTATTATGATTATTATGGCTATGATTACCATAACTATCGTGGTGGATATGAAGATCCTTACTATGGTTATGAAGATTTTCAAGTTGGAGCTAGAGGAAGGGGTGGTAGAGGAGCAAGGGGTGCTGCTCCATCCAGAGGTCGTGGGGCTGCTCCTCCCCGTGGTAGAGCCGGTTATTCACAGAGAGGAGGTCCTGGATCAGCAAGAGGCGTTCGTGGTGCGAGAGGAGGTGCCCAACAACAAAGAGGCCGCGGGCAGGGAAAAGGGGTCGAGGCCGGTCCTGACCTGTTACAATGAAGACTGACTTGCTATGTGGGATTACACCAGAAGCTTGCAGTGGAGTAATGGTG EMBV3_31842 TCGCGCAGCTGCTGCGTGCCGAGCCCTATCCCGAGCGTGCCGTGGCCTTCATGGACCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00395 CTCCCGCCTCTCAGCAGCAAGGAACGGAGCTTCAGCACCTCTTCAGTAATGATGATGAAA Gene BVV0102_170151 + 0 NULL GK000014.2:3640718-3711836 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051149 TCONS_00051147 TCONS_00051155 TCONS_00051146 TCONS_00051152 TCONS_00051145 TCONS_00051150 TCONS_00051151 TCONS_00051153 TCONS_00051148 TCONS_00051154 1 XLOC_031122 Coding TCONS_00051149 XLOC_031122 Coding Coding SLC45A4 14:3677270-3721227 j TSS38213 857 1 TCONS_00051149_4 112 4 0.980594230594231 0.00224192608299073 5.85355238017342e-76 0.00122231933349484 0.00102563195772187 0.00136660464199868 9.80043124997819e-120 0.000376281800512635 8.01508020015077e-113 0.00123165482596565 0.000101858410003117 2.07063259220886e-05 2.71423341337783e-81 3.75065341694543e-31 0.000318325554702796 2.65837913949054e-05 1.72288806131484e-16 0.000414972177635188 0.00120548440212453 1.1487976739556e-18 1.3807793587011e-17 6.39644192933797e-88 0.00016166104532403 0 5.40639111494086e-05 1.54558861104815e-38 1.81163439275758e-135 1.12797727203982e-131 0.000189920090075668 1.36849739882462e-94 6.17129435922778e-18 XM_005194496.1 SLC45A4 PREDICTED: Bos taurus solute carrier family 45, member 4 (SLC45A4), 0.0 1265 100.00 0.816802800466744 XM_005251001.1 SLC45A4 PREDICTED: Homo sapiens solute carrier family 45, member 4 (SLC45A4), transcript variant X1, mRNA. 0.0 690 84.10 0.749124854142357 TCONS_00051149_4 sp|Q0P5V9|S45A4_MOUSE S45A4_MOUSE Solute carrier family 45 member 4; 1e-42 150 87.80 0.723214285714286 0 coding 0 0 0 0 0.124617119461324 0.798650473596416 -0.120296132031003 0.0467526346201012 GTGTTGCTCTTGACTGGGCTGCGGGGGAACACCTTCCAGCAAAGGGCTTTTTCAGAGGAGATCGCCCAGTCGCTCGATGGGGCGCGCCGGCGGCCTGCGTCCGTGTGTCACCTGCCCGCCTCTCAGCAGCAAGGAACGGAGCTTCAGCACCTCTTCAGTAATGATGATGAAACTGGTATTAACTGAATGGCATTTATGGATTTTTAACTCTAATTCACAGTAAGCCAGAAAGCCATATGTTCAATCCAACCAAAAATCATTCTGTTTTGCTGCGTGTCTCATCCGATTGTGAGAAGTTTCAAGATACCTGTTTGTACAAAGAGGAATATAAGTGTTACTTGCCGGAGGAGCACAGCTGAAGCAGAAAGCGAAGACGTCTTAATTTATCCTTAAAGATATATGATAGAATTATTTATTTAGATAGAATAAAGAGATATATATATATTTTTGGTGGTGATGAAAATGGCTCCGCAGAATGCCGATGCAGAATCTATGCAAGTTCAGGAGCTCCCGGTGCCCCTGCCAGACCTCCAGAAGCCGGGGAGGGCAGAGGCGGAGACGCGGGATGAGACTGTCAGCGAGGGCTCCATCGACCGTATCCCCGTGCGCCTGTGGGTGATGCACGGGGCCGTGATGTTCGGCAGGGAGTTCTGTTACGCCATGGAGACGGCGCTGGTCACGCCAGTCCTGTTACAGATCGGGCCGGTGGTCTGGGGGCTGAGGAGAGACTGCCCAGGAACTCCTGCAGACCAACGCCTGGTGCGAGCCTGGCACTGCAGTCCTAACTTAATGTGAATCAGAATTCCAAGGATGTGATGTGTCAGAACTGGAGCCTCACCTTTTCCTCCTGTGGGAAA EMBV3_21533 AGGTCAACAGACTCTAAGCAGGGAGGGAAAGAAGAGTAACAGCATTGTCGTCAGTGTGCC Gene GeneID:281598|ACVR2A:NM_174227:49_cdna UTR3_Alt 2 NULL GeneID:281598 2 GENE ACVR2A ACVR2 activin A receptor, type IIA EMBV3_08184 GAGAGTCATCAGTGAGCTTCCCCATGTATCAGCACCTTTCTCTAGAGTTCAGTATGAGTG Gene GeneID:505807|PCMTD2:NM_001024479:889_cdna UTR3_Alt 2 NULL GeneID:505807 13 GENE PCMTD2 C20orf36 MGC139967 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 EMBV3_34315 TTGCGGCCGTCCGAGTCCGTGTACCGCATTGACTTCATCCAGCAGCACAGGCTGCAGTTT Gene GeneID:613648|OMP:XM_002693485:114_cdna Constitutive 0 NULL GeneID:613648 15 GENE OMP NULL olfactory marker protein EMBV3_40092 GAGGGGTGACTGGAGGGACCCTGTACCCAGGGAACATCATTAAGAACGAGGCCCTGTTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08959 GTATAGCACATGGAACTCTACTCAATGTTATGTGGCAGCGTGGATGGAAGCGGGGTTTGG Gene BVT0102_106751 + 0 NULL GK000015.2:46604153-46624352 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35993 GCACAGACACCGGAATAGTGCTCATGTGGTGATGCAGTCTGTTCCCAAGCTGAATATCAG Gene BVT0102_028661 + 0 NULL GK000023.2:4088589-4390361 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00132033 TCONS_00132034 TCONS_00132024 TCONS_00132029 TCONS_00132032 TCONS_00132026 TCONS_00132036 1 XLOC_080688 Coding TCONS_00132034 XLOC_080688 Coding Coding COL21A1 23:3990032-4181459 j TSS98875 4150 1 TCONS_00132034_4 952 30 0.97847732282971 0.000190830040698885 0.000416541133094986 6.01162487905619e-05 7.67908871712473e-21 0.000258497042785672 3.71840950390939e-05 7.45354013224427e-05 0.000108849667417552 0.000368635441754943 7.76506623445216e-08 5.53297800329365e-08 0 3.89718121814965e-10 1.67237195553848e-11 1.64812745150514e-24 1.36028442017241e-06 1.17752228140723e-34 6.17447884698208e-11 2.86795635640654e-35 0.000262980025714065 9.29249732487359e-09 6.8633843014487e-14 3.59572370821313e-07 7.18958882950527e-13 0.000419042166558634 8.7728095360517e-05 0.00015302617605406 4.02288093896128e-69 4.99125939643632e-36 1.37229965472103e-54 XM_003587662.2 COL21A1 PREDICTED: Bos taurus collagen, type XXI, alpha 1 (COL21A1), mRNA. 0.0 7110 99.62 0.958072289156626 NM_030820.3 COL21A1 Homo sapiens collagen, type XXI, alpha 1 (COL21A1), mRNA. 0.0 4534 85.35 0.954939759036145 TCONS_00132034_4 sp|Q96P44|COLA1_HUMAN COLA1_HUMAN Collagen alpha-1(XXI) chain; 0.0 1531 89.03 0.998949579831933 3 coding 0 0 1 1 -0.0836909161247727 0.59125387824371 0.00576647763910976 0.920920879921362 TCAGACCTTGCATTGCAGCTGGGGAGGCTTTAAAAGAACGTGGGGAAATGGGGGGAAACAGATGAAGATCTTGCCCATGCTCATGATCCTTGGCCATAGAGGGAAGGAGGGAGAAAAAGGAGCGTGCATGCAAGAGAGTCAAGGGAAGAGTGATCCTTTGAGAATTAACTGAGTCCTAAAGCAAAAACAGAAACATGGCTCACCATATTACATTTCTTTGGATAATTTCGATCCTGCTTCTTCAGAATTCTGTATTAGCTGAAGATGGAGAAATAAGATCAAGTTGTCGTACTGCTCCGACAGATTTAGTTTTCATCTTGGATGGCTCTTACAGTGTTGGCCCAGAAAACTTTGAAATAGTGAAAAAGTGGCTTGTCAATATCACAAAGAACTTTGACATAGGACCGAAGTTTATTCAGGTTGGGGTGGTTCAGTACAGTGACTACCCTGTCCTGGAGATCCCCCTGGGGAGCCATGAATCGGGAGAGAACTTGATGGCAGCCATGGAGTCAATACATTACTTGGGAGGAAACACACGGACTGGAAAGGCCATCCAGTTTGCCCTTGATTACCTTTTTGCCAAGTCCGCACGGTTTCTGACTAAGATCGCAGTAGTCCTTACGGATGGGAAATCCCAAGATGAAGTCAAGGATGCTGCAGAAGCAGCAAGAGACAGTAGAATAACATTGTTCGCCATTGGTGTTGGGTCAGAAACAGAAGAGGCAGAACTTAGAGCTATTGCCAACAAGCCTTCATCCACCTATGTGTTTTATGTGGAAGACTACATTGCAATATCCAAAATAAGGGAGGTGATGAAGCAGAAACTTTGTGAAGAATCTGTCTGTCCAACACGAATTCCCGTGGCAGCACGTGATGAGAAGGGGTTTGATATTCTTTTAGGCTTGGGTATAAAGAAAAAGGCTAAGAAGAGAGTTCAGCTTTTACCAACAAAGATTAAAGGATATGAAATAACATCAAAAGTTGATTTATCAGAATTCACAAGCAATGTTTTCCCAGAAGGTCTTCCTCCATCATACGTATTTGTCTCCACTCAGAGATTTAAGGTCAAGAAAATGTGGGATTTATGGAGAATTTTAACCATTGATGGAAGGCCACAAATAGCAGTTACCTTAAACGGAGTGGATAAAACATTATTATTTACAACAACCAGCATCATTAATGGCTCACAAGTGGTCACCTTTGCTGACCCTCGAGTTAAGATATTATTTGATGAAGGCTGGCATCAGATTCGTCTTTTAGTAACGGAACAAGATGTAACTCTGTATATTGATGATCAACAAATTGAAAACAAGCCATTACATCCAGTGTTAGGGATCTTCATCAGTGGGCAAACCCAAATTGGAAAGTACTCTGGGAAAGAAGAAACTGTCCAATTTGAAGTCCAAAAGCTACGAATCTACTGTGACCCAGAGCAGAACAACCGGGANNNNNNNNNNAATGGTGAGTGCCTCAACGGTCCCAGTGATGTAGGTTCAACCGCAGCTCCCTGCATTTGTCCTCCAGGAAAACCAGGACTACAAGGGCCCAAGGGTGACCCCGGACAGCCTGGGAATCCTGGCTACCCCGGACGGCCTGGTCAAGATGGTAAGCCTGGATATCAGGGAATAGCAGGATCACCAGGTGTTCCAGGATCCCCGGGAATACAAGGAGCACAAGGACTGCCAGGTTACAAAGGAGAACCTGGGAGAGATGGAGAAAAGGGTGACCGTGGACTTCCTGGTTTTCCTGGGCTTCATGGAATACCAGGATCGAAGGGTGAAATGGGCCCCAAAGGAGATAAAGGAGCACCTGGATTTTATGGCAAAAAGGGCGCAAAAGGTGAACAGGGGAACGCTGGCTTTCCTGGCCTTCCTGGACGTGCTGGAGAACCTGGAAGACATGGAAAGGATGGATTAATGGGTAGCCCTGGTTTCAAGGGAGAAGCAGGACCTCCAGGTGCTCCGGGGCAGGATGGATCTCGAGGAGAACCTGGAATCCCAGGATTTCCTGGAAACCAAGGATTAATGGGACAAAAAGGAGACACTGGGCCTCCAGGACCACTAGGGAAGAAAGGAGCTCCGGGAATACCTGGTTTGATGGGAAGCGATGGCTCACCAGGTCAGCCTGGAGCCCCAGGATCTAAGGGGACTAAAGGCGAACCTGGACTTCAAGGGCTGCCTGGGGCTTCTGGGCTCAAGGGAGAGCCAGGAGCGGTGGGTCCCCCAGGAGAACCAGGATACCTGGGTTTACCTGGAATTCAAGGGAAAAAGGGGGACAAAGGAAATCAAGGTGAAAGGGGCATTCAGGGTCAAAAGGGAGAAAATGGAAGACCAGGGATTCCAGGATTCCAGGGAATTCAAGGCCATCACGGTGCAAAAGGAGAGATGGGTGAAAAGGGAGAGCCTGGTGCCCGAGGTGCCACTGGAGCCAAAGGAGAGTCTGGGGTGGATGGTCAGATGGGGCCCCCGGGCCCCCAGGGGCCCCCTGGGCAACCAGGTGATCCGGGCCCCCCAGGAATGGATGGGAAGCCGGGGAGAGAATTTTCAGAACAGTTTATTCGACAAGTTTGCACTGATGTATTAAGAGCCCAGTTACCTGTCTTACTTCAAAGTGGAAGAATTCAAAGCTGTGATCATTGCCAGCCCCAGCACGGCTCCCCTGGTATTCCAGGGCCACCTGGTCCCATGGGCCCAGAAGGTCCCCGAGGATTCCCTGGTTTGCCAGGAAGAGATGGTGTTCCCGGATTAATGGGAGCTCCAGGACGCCCAGGTGTCAAAGGATTAAAAGGCCTCCCTGGACGGAACGGGGCAAAGGGGAGCCAAGGACTTGGGTACCCTGGAGCACAAGGTCCTCCTGGTCCCCCAGGTCCAGAGGGCCCCCCTGGAATAAGCAAAGAAGGTCCTCCTGGAGACCCAGGCCTCCCCGGCAAAGATGGAGACCACGGAAAACCCGGAATCCAAGGACAGCCAGGCGCCCCGGGCATCTGTGATCCATCGCTGTGTTTTAGTGTCATTGTTGGAAGAGACCCCTTTCGAAAAGGACCAAACTATTAGTTTCTGGTGCCTCGTCCAGCAGCCTCGGCATGGTGCTCTTCTTTTGTGGTCTTTGCATCTCAGGAAGATAACAACAGTAATCCCTTGAAAAGAAACTCAAGTACCTCGGTGTTTTTATTATTGTTTTTTCCTTAAGGAAAAATATAGAAAAGGTCACGTATACTGATTTTAAAGGCTCCTCAGTTCTTCGGAGCCTTGAGATTGGTAGCATTAACTAAATCTCAAGGGTTTCTTGTGAGTCCATTTGTTTTAATCAAAGTTGAATACAAAAAAAAACAACCCACCATTGCCTGTCAGCCAGTCAGTTGCAGTCACTGTGAAAAGTTTCACGTTCAGCCTCCGTGCAGCAGAGTATTTGAGTTCAATTTCTTGTCTGTGTGAATTTCATGTTTCATAGCTCATTCTTCTACCTTAGCTGAAACGTGCATCTGGCCGCGGGAAATGAGATCAGGGCTGATATTCAGCTTGGGAACAGACTGCATCACCACATGAGCACTATTCCGGTGTCTGTGCTTATCAGACAGGGGTGATGGACTGTTGGTCGTTCAGTGTTTTGAATATCACCTGTGAAAGAGATTGATGTGTTTCTTACTCCATTTGCAAGTTCTCAGATGATTCAATGAATGATGATGCTGAAAAAGAGTAATGATTGCATTGGGAATGGTCTAAATATGAACCATTAAAAACATTCTGGAGAAAAAGGTTCATTAGACCTGGTCAATGTGTTCAAAGGAATCATGAGTTCAGAAACACTAAAAATACTTTCTTCTTCATACCTGCTTAGTAATTGGAATGTTTGTTGCATGCCTTCATTTTCCATTTCATTTACTATATGTGTATGTTCATATATGTTAACTTTTATTGTAGCAAAGCTAATGGGAGTCAGTGCTCTAGTTGACAGGAAAGGTAACTCCATAGATCCTAGGATGTCTTGATAATTTTTTAGCAGACTTTAAAATATTTTAAACAATCTTTGTGTACTGTACTTAATGCTTTTGTAAGGAATGTAACTTGAGATATTCCATCCTTATCATGCTCTAAATTTGTTACATGCTTGTTATTCAAAGTACAATAAAATCTTGTAAAAGCCTGAATGC EMBV3_42061 CAATGACATGTACCACCCTCTGCCTCTTTAGTGACTGGAGGTTAGAGTGAGTGTTGGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16713 CAGAAATTCATGGAAGATATGATGCCAAAGGCAGGCGCTAACATGATTGTGTCTGGCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34132 ACATGGGAAAACCCACTGCACCTCCTCCACCCATCCCTCAGCATGTGGATCTGCATTTCT Gene GeneID:531757|LOC531757:XM_002689827:22_cdna Constitutive 0 NULL GeneID:531757 8 GENE LOC531757 NULL similar to Aminopeptidase O (AP-O) EMBV3_21080 AAGAAAACGAGGTTGGGGACCTTGATAGCGGCTTTTCATCTTCGGATACCCTAGAGTAGC Gene BVV0102_290646 + 0 NULL GK000006.2:93399010-93484588 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10898 TTGAGGGAAGAGGATGATATTGAGCCTCGCCCAGTATTTAAGAAGAAGCCCCTGGTGTGG Gene GeneID:514380|LOC514380:XM_002685591:215_cdna Constitutive 0 NULL GeneID:514380 2 GENE LOC514380 NULL similar to Chromosome 2 open reading frame 62 EMBV3_09588 CAGTGACACAGAAACAACAGAAAAGCTCCTGGAACTTTCAACAAGTTACTTCAGTACAGG Gene GeneID:514162|LOC514162:XM_002691888:24_cdna Constitutive 3 NULL GeneID:514162 12 GENE LOC514162 NULL similar to aurora borealis EMBV3_41402 GGGAAGCTGGCACAGGTGGTCAGGATTTCCAAGAAGCATTTCTTCAAGCAGGAAGTGAAG Gene GeneID:100138072|LOC100138072:XM_002686562:57_cdna Constitutive 0 NULL GeneID:100138072 3 GENE LOC100138072 NULL similar to hCG2012694 EMBV3_10648 AATGGTGTGTGAAAAACCTCCCAGCCCAAGATTGCTCAGCTGTTTGTACCTGACTTGCCG Gene GeneID:530618|SPOP:NM_001075936:123_cdna UTR3_Alt 3 NULL GeneID:530618 19 GENE SPOP MGC139890 speckle-type POZ protein EMBV3_40687 CCATCAGAGCTGACAAACTAGAGCAGAACTCTAAACCCTAGCGATGGTCTGAAACCAGGG Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_28069 ACCTACAAGATGGTTGCCCGGAGCCCGAATACCAGATCCGGCTGTGCTTTGGTGAGGAGT Gene GeneID:618409|LOC618409:XM_002692284:1642_cdna Constitutive 0 NULL GeneID:618409 13 GENE LOC618409 NULL similar to interferon regulatory factor 10 EMBV3_42870 CTACTGATTCCAGCAGCTCAGTGAAACCCAACAGGATAATCCCAAAGGAACCTGAATCAC Gene BVV0102_137938 + 0 NULL GK000024.2:35394020-35459274 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01161 CAACGGTGGTGGGCTGAGGTACATCTTGCGACTGTTGTCCAGCTCTCACTGCCTTCCTTT Gene GeneID:510465|CRTC1:XM_002688527:110_cdna Constitutive 1 NULL GeneID:510465 7 GENE CRTC1 NULL CREB regulated transcription coactivator 1 EMBV3_05236 TTGTTACTGAAGGATCACATTTTGTTGAAGACAGTTAATCAGCTGGCCCACGCCCTTCAT Variant GeneID:515180|MFN1:XM_002684903:32_cdna 209^507 3 EMBV3_23260 GeneID:515180 1 GENE MFN1 NULL mitofusin 1 EMBV3_12483 CCTTTGGTTCCCAAGACTATCTTGAACTGGCTAACAGATTTCCTCAGCAGGCCTGGGAAG Gene GeneID:534495|LOC534495:XM_002707773:295_cdna Constitutive 0 NULL GeneID:534495 21 GENE LOC534495 NULL similar to S phase cyclin A-associated protein in the ER EMBV3_01451 CCAAAGAAGGGAGTAGCTGGACTTAGGCTGGACTGTGATGCTAATACTGTAAATCTGGCG Gene GeneID:788183|LOC788183:XM_002691758:294_cdna Constitutive 0 NULL GeneID:788183 12 GENE LOC788183 NULL similar to Ring finger protein 146 EMBV3_42522 AAGCAGTTGCCGGTTGGAAGTTGCTTCATTGCTGCCGAAGCCCAGGACCCATCAGCAGTT Gene BVT0102_256323 + 0 NULL GK000029.2:47067972-47544379 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34611 CCCCACTGAAAGGGGGGCATCCTCCTGCAGTGCCACTGCAAATGTTGCCAAAATACAGAC Variant GeneID:574085|DAPL1:NM_001025346:145_cdna 105^192 1 EMBV3_15998 GeneID:574085 2 GENE DAPL1 EEDA death associated protein-like 1 EMBV3_07383 TGGCTGGGACCAGGCAGGTGAGCCTGGGTGCCTGCGAAGTCCCAGCTCTCATGAAATAAA Gene GeneID:517837|MAD1L1:NM_001102044:203_cdna Constitutive 0 NULL GeneID:517837 25 GENE MAD1L1 MGC166099 MAD1 mitotic arrest deficient-like 1 (yeast) EMBV3_23323 GCTGTTGTTCAACCATCACACTGATCTCGTTCCAAATGTTCTTCATCCCCCTGCATCCAC Gene GeneID:524513|SERPINB9:NM_001075859:217_cdna Constitutive 0 NULL GeneID:524513 23 GENE SERPINB9 MGC142682 serpin peptidase inhibitor, clade B (ovalbumin), member 9 EMBV3_33548 GGGCAGGTGGGCCTTGAGTTGTTGCTGGTTAGGCCGTGTTCCTCTGTTCAGTTGTAAAAA Gene GeneID:535470|PIN1:NM_001034632:5_cdna Constitutive 2 NULL GeneID:535470 7 GENE PIN1 MGC137201 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 EMBV3_05850 TAAACTGTTTTAAAGTGTCCTGTGGGGTGAGGCAGGGTTGGAGATCTTTCCCCTCCCTTG Gene GeneID:618184|KDELR1:NM_001076495:442_cdna Constitutive 0 NULL GeneID:618184 18 GENE KDELR1 MGC139648 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 EMBV3_05103 AAAGATCTTGATATGAAAATCCAAAAAGAGCAAGAAAGGCAGAGAGTTGTGCAGCGATGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13237 CTTTGGCGTCACGAGAGAACTCATATTGGAGAGAAGCCTTATCAGTGTAACGAGTGTGGC Gene GeneID:100300479|LOC100300479:XM_002695324:24_cdna Constitutive 0 NULL GeneID:100300479 18 GENE LOC100300479 NULL similar to zinc finger protein 347 EMBV3_20477 GTGATAGCACACTCAGACAAGAACCGCATGACCCCCCACAACCTGGGAATTGTGTTTGGA Gene GeneID:507960|ARHGAP9:XM_002687563:591_cdna Constitutive 0 NULL GeneID:507960 5 GENE ARHGAP9 NULL Rho GTPase activating protein 9 EMBV3_32407 GGGCTCAAAGGCTGAAGTTCTTGTGTGAACGTAATGACAAGGTGTTCTTTGCCTCCGTCC Gene GeneID:509109|LOC509109:XR_084563:24_cdna Constitutive 0 NULL GeneID:509109 11 PSEUDO LOC509109 NULL similar to mitogen-activated protein kinase kinase kinase kinase 4 EMBV3_23696 CCAGCTGCAGGAGCGGAGCTACAACTTCAGGACAGCCACACATTGGTGGGAGAGCTCGGG Variant GeneID:618262|P2RX6:XM_002694647:154_cdna 913^957 1 EMBV3_39691 GeneID:618262 17 GENE P2RX6 P2RXL1 purinergic receptor P2X, ligand-gated ion channel, 6 EMBV3_23256 TGGTTGCACATCCTGTTTTTCTTCTGCCTGCTCTCTTCTGCGACCTTCTCTGCTTTGAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11303 CTGATCAGGGTTCCAGTGGTCCAGAGTCTTTTACTGTCTATCACTACAATGGATTGAAAC Gene GeneID:538509|C13H10ORF97:NM_001076107:136_cdna UTR3_Alt 3 NULL GeneID:538509 13 GENE C13H10ORF97 MGC139777 chromosome 10 open reading frame 97 ortholog EMBV3_36874 CTGTTATCAGAGGCATTCCAGGACTTTCTGGTGGTCCCGTGGCTAAGATTCTGCACTTCC Gene BVT0102_087518 + 0 NULL GK000021.2:69791489-69809411 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121942 TCONS_00121943 TCONS_00121941 1 XLOC_073533 Coding TCONS_00121943 XLOC_073533 Coding Coding - 21:69799909-69802908 - TSS90725 2999 2 TCONS_00121943_4 106 0.767922640880293 1 0 0 0 0 0 0 0 0 3.15557067707217e-05 0 8.65856175254885e-05 9.92306706896966e-06 5.96454819388856e-05 0 5.39141069793734e-11 0 0.000423276004269641 1.26634018295103e-10 2.40470487477168e-05 0 0 0 9.37808268466266e-05 0.000558654513716029 0.000209557753610275 0 0 9.76850142864376e-06 1.15887395553564e-05 9.91224285183827e-06 0.000244627482806415 XM_005197460.1 LOC101908419 PREDICTED: Bos taurus secretory phospholipase A2 receptor-like (LOC101908419), mRNA. 0.0 755 86.55 0.210070023341114 0 coding 0 0 0 0 0.010342726415515 0.925387371090836 0.0532073422302183 0.272151059166218 GGGAGTAAATAATTTGAAACAGGGACTTTACCGATGGTCCAGTGGTCCAGAATCTGCCTTGCAAAGCAGGGGATGCAGGTTTGATCCTTGGTCAAGGAACTAAGATCTGACATGCCAAGGAAAACCTAAGTCCCCACACCAAAACTAGAGCCTGTGTGTGGCAACAAAAGATCCCATGTGCTGCAACTAATAACCCACACAGACAAATTTTTACAAATTAATAATTTGGAACTTGTCAAGGACAAATAAAAATCTTAAGCATTTTCCATAAATATTAGTAGAAAGGGTTTAGCCAGTGAGACAAATAAGCTTGATTTGTTCCATCTGCCAGAAACTCAATTTCAATCCAACTTCTTTTGCAGACTAATGGGTTTATATTGCTGTACCTGACTCATGGCTAAATTTTAGAATAGGAACTATGAGGCCTCTGTGTTTATGTGTCTTGTAGATGTAAGGTACTGGCAAAAATTAATTCGTAAAATTGACTTCAAGAAAATTAAGCTTATATAAATACTCAGAAAATAATCTGGCCAGAATGAACTTCAGTTTCACATCATCTGGAAAATATTTAGTACTAAACTGATGTCATCAATGTTATGTACCATGGTTTACTAGACCTTCTATCTATTGCTAATGTATCAGCAAGAAAAATAACATGGAAAAACTTTTAAGGAAAGCATGTGTTTTCAGTAAAAGAAGGTGTGAGGAATGAAAAAATACTGAAAAGAGTTATGTACAATCAGGATTTTCTAAGATTGGATTGAGTTTAGTTAGGTATTTCGGGAGGGCCCCCGAGGCATCCCAGAGAGAAATATTTAGCTAGTATTATTTACTATGTTGGGAGTAAGGTAAAGTAACACCTGGATTTGGTTTTTCTGTTAAAAGGGAACAAAGTCTTCCTGGAATGTCTTTTAACTTCTGACCACGGACAGAATCCTTGTCCCCTACAATGGAAGTGCAGAATCTTAGCCACGGGACCACCAGAAAGTCCTGGAATGCCTCTGATAACAGATTGTGTAAGTGATCTGTATTTGCTTTTGAGATCTAACTTTTAAGTGTTAGTCACTCAGTCCTGTCCAACTCTGCGACCCCATGGACTGTAGTCTACCATGCTCCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCACTTCCGTCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCCAGGTTGCTTGAATTGCAAGCAGATTCTTTTCTGTCTGAACCACCAGTGAAGCAAATAAATAGTGTAATGGGAGGGAAAGGGGCAGGGCACACTTTTTGAAAGAATGACATAGCCCAAGGACACAACATAAACCGGTTAGAATCAAAAGGGACCAAGACTAGACAAGACTAGACCTTGATCCTCAATCAACTGGTGACATGACACACCCAGAGGTGCCATGACAGTTCCAGTGAAGTGAAGTCGCTCAGTTGTGTCCGACTCTTTGCTACCCTGTGGAGTGTAGCCCACCAGGCTCCTCTGTCCATGGGCTTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGAATCTTTCCAACCCAGGGATTGAATCCAGGTCTCCCACATTGTGGGCAGATGCTTTAACCTCTGAGCTACCAGGGAAACTCAAACTATTTCATCTTTCCCTTCTGTTAAAAGACCAAGGAGTGGGCGTTTCTAGAAAAGAGAGTTCCAGAAAAATATCTACTTCTGCTTTATTGACTAAGCCAAAGTCTTTGACTTTGTGGATCACAACAAACTATGGAAAATTCTTAAACAGATGGGAATACCAGACCATCTTACCTGCATCCTGAGAAATCTGTATGCAGGTCAAGAAGCTACAGTTAGAGCCAGATGTGGAACAGAATGGTTCCAAATCACTTCATGGCAAATAGATGGGAAACAATGGAAACAGACTTTATTTTCTCTGGCTCCAAATTCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTGCTCCTTGGAAGAAAAGCTATGACCAACAGACAACATACTAAAAAGCAGAGACATTACTTTGCCAACAAAAGTCCGTCTAGTCAAAGCTTTGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTTTGGAAGAATTGATGGTTTCGAACTGTGGTGTTGAAGAAGACTCTTGAGAGTCTCTTGGACTGCAAGGAGATCAAACCAGTCCATCCTAAAGGAAATCAGTCCAGAATATTCATTAAAAAGACTGATGTTGAAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGAACTGACTCACTGGAAAAGACCCTGATGCTGAGAAAGATGGAAGGCGGGAGAAGGGGATGACAGAAGATGAGATGGTTGGGTGCAGCACGGACTCAATGGACATGAGTTTGAGCAAGCTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCATGGAGTCGCAGAGTCAGGCATGACTGAGCCACTGAACTGAACTGAACTGAGTGGGCAGTGGCCCAAATCCTGGTAATCTCCGCCCCTTCCCCCAAATAGTTGGAATAATCTTCCCACTCATTAGCATATGAAATTACCCAGCCTATACAAACTAACCACATCACATTTCGCAGCTGAACTCACCCTCTGTGATGGTCTACACTGTCTGTGGAGTATGCTTCTCTCTGAATCTGAATAAATCCACTTCTTACCTATCACTTTGTCTCACTGAATTCTTTGTGAAGAGACATCAAGAACCTGAGCTTCATTAGAAGGTCCTCAAACCAGGTACTGTGGGTTTTGGCTGACTCTGAGTACAGTCATGTGGGTTTGAGTCCTAGCCACACGGGTTCAAGTCCCAATCTGAGGTAAATGGTATCAGCAGTGAGAAATCCTATTTGATCAACTATTTTGAAACTTTCTGACAAACTTTCCAAATCCCAAATTTTAATCAAAAGTTCTTTTGACTTTTAGCTAATTTGGG TCONS_00121945 TCONS_00121946 TCONS_00121947 s 3' 6496 TCONS_00121945 TCONS_00121946 TCONS_00121947 s 3' 6496 EMBV3_34596 TCATGGCAGTGGAAGTCTGCTTCCCTCTCCCGGACTCCTCTGCGCACCCTTCCAGGATCA Gene BVT0102_310999 - 1 EMBV3_25536 GK000011.2:105614898-105673813 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27235 AAGATCCCCTACAAGTACGAGCACAATAAGCTATCTTAATGACTTGGACCGCGTTGCCGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28014 ACGGCAGATGCACTTTATACACACGTACACACATAAGCATACACGAATGTTCCCTGGACC Gene BVV0102_371845 + 0 NULL GK000027.2:32012978-32355203 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42459 GTTCGAAGAACCATCATTATCAAGGGCTACATACCCCCTACAGCCAAGAGCTTTGTCATC Gene GeneID:614804|LGALS4:NM_001034768:736_cdna Constitutive 2 NULL GeneID:614804 18 GENE LGALS4 MGC127318 lectin, galactoside-binding, soluble, 4 EMBV3_17202 TTTGCTTGCTTTCCTCCTTCTGAAGACTAGAGCGTGAGATTCCTGAGCGTTTTACCATCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13788 GGCATCGCGGGTGTCACCTGTGCGGAGCAGGAATTTCAGAAACAGCTTACTAAAGCTAAG Variant GeneID:505859|PYROXD1:NM_001105334:19_cdna 93^422 1 EMBV3_01039 GeneID:505859 5 GENE PYROXD1 NULL pyridine nucleotide-disulphide oxidoreductase domain 1 EMBV3_05566 CATTTATCGCCGGCACCCCCTCAAGTGGTTACCTGTTCAAGACTCAAGCACAGAAGACAA Gene GeneID:511453|SPCS1:NM_001034404:136_cdna Constitutive 0 NULL GeneID:511453 22 GENE SPCS1 MGC127153 signal peptidase complex subunit 1 homolog (S. cerevisiae) EMBV3_06184 CATGTGCCTTCTGCACGCCTCCCTGTCCGAGGCGCTACTGGGCTGAGATCTCGGATACCA Variant GeneID:538903|SIGMAR1:NM_001034655:46_cdna 385^431 2 EMBV3_30309 GeneID:538903 8 GENE SIGMAR1 OPRS1 sigma non-opioid intracellular receptor 1 EMBV3_37275 GAGTGGCTGCTGCTGGAGGATGGCAACGAGAGTCTGAATGGTGTCTGGCTGAACAGAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24582 CTTTGGACAACGGGAAGGCACCTACCACTTTCGGATGACTATTCTGCCCCCCATGGAGAA Gene GeneID:539188|GPT:NM_001083740:119_cdna Constitutive 0 NULL GeneID:539188 14 GENE GPT NULL glutamic-pyruvate transaminase (alanine aminotransferase) EMBV3_29018 GCGCCCGTGATCTACGGCCTGGAATTCCAGATCCACGTCATAGACTTTGACGACGAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14273 ACATACCTGTGATCTCAGTCTTTTCCTCTTCAACGATGCACTGCTCGTTTCTAGTCGGGG Gene GeneID:100141063|ECT2L:XM_002690277:29_cdna Constitutive 0 NULL GeneID:100141063 9 GENE ECT2L NULL epithelial cell transforming sequence 2 oncogene-like EMBV3_09605 CTCTATCTTATTATTTATCCTTACAAACTGCTTGGTTAAGGTCAGTGGTTCTTGGTTGGC Gene GeneID:512846|UEVLD:NM_001098952:19_cdna Constitutive 1 NULL GeneID:512846 29 GENE UEVLD MGC152503 UEV and lactate/malate dehyrogenase domains EMBV3_28021 GCGACGAGTCTTCACTTCTTAAACTTTGTGATTATCTCCGGGCCCTTTGGCCAGGTTCTG Gene BVT0102_429716 + 0 NULL GK000005.2:61072766-61229514 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01798 ACATGGAGGCCTTAAGCACATCCCCCTCACCAATGCCCCATCTGCACACACAGGAGGAAG Gene GeneID:508716|BSG:NM_001075371:41_cdna Constitutive 0 NULL GeneID:508716 7 GENE BSG RPE7 basigin EMBV3_22854 CTTGCTGACAAGAGGCAAGTGTCAATCGAGGAAGGAGAGAGGAAAGCCAAAGAGCTGAAT Gene GeneID:616537|RAB6A:XM_002693454:33_cdna UTR3_Alt 2 NULL GeneID:616537 15 GENE RAB6A NULL RAB6A, member RAS oncogene family EMBV3_05315 TTTTCTCAGCACCTCGTCGGGACAAGAAAGACAGAGCCCGCCAGAACCAAGGTCCTTTTT Gene BVT0102_348411 + 0 NULL GK000021.2:20429489-20485596 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120632 TCONS_00120634 TCONS_00120631 TCONS_00120633 1 XLOC_073221 NonCoding TCONS_00120633 XLOC_073221 NonCoding NonCoding LOC100848921 21:20453001-20469643 j TSS90064 556 1 TCONS_00120633_1 49 0.406474820143885 4 0.966828916531458 0.0306713924666056 0.0478044717226444 0.030691009104438 0.0158400855968114 0.0036796250827487 0.00552398743426614 0.00703103608285322 0.00873668645023695 0.00707303017877367 0.000469748657254763 0.00031112184457041 0.000467667812603924 0.00140612443686477 0.000981035462675441 0.000897576507660007 0.00324206254599949 0.000937279196245402 0.00215118986149864 0.0258813630027181 0.0602639815467406 0.0288100962044827 0.00258465982293043 0.000504319162153913 0.000881535182863685 0.0315066874633731 0.0266484347445368 0.0297839968223204 0.000869147842051014 0.000972082159331509 0.00114545969871294 XR_229232.1 LOC100848921 PREDICTED: Bos taurus uncharacterized LOC100848921 (LOC100848921), 0.0 829 100.00 0.823741007194245 0 noncoding 0 0 0 0 -1.23723943454484 0.00589591814681208 -0.0323605491821292 0.65881947808455 GCAGGACCTGGACTAACAGCCGCTCCTGGGCAGGACACTGGGCTGCACTCTGAGAAGTTCCTGTTGCTCCCCTGACCATCATGTGGCCAGAGAAATTGGGCACAGGGATCGGGCATAAAGTCAATGGGCAGCAGGTGAGGCTGCGGCTGTGAACTCCTTCCAGTCGACTCTCTCCTCCGAAGAGAACAGAGCTGCCCCTCGTCTTTCAGCCCAGCTCTCCTGTGTTTTCTCAGCACCTCGTCGGGACAAGAAAGACAGAGCCCGCCAGAACCAAGGTCCTTTTTCACGTTTAGGTGATTCAGTTCCGTTCAGTCGCTCAGTGGTGTCCAACTCTGCGACCCCATGAATCGCAGCACGCCAGGCCTCCCTGCCTGTCCATCACCAACTCCCGGAGTTCACTCAAACTCATGTCCATCGAGTCGGTGATGCCATCCAGCCATCTCGTTCTCCGCCGTTCCCTTCTCCTCCTGCCCCTAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGATTACAATGTGTTCAATAAACTTCTGGATCAT EMBV3_32454 AGCTCAGTCCGCTTCATCTGTGGCACCCAGGCACTGCTGACTTCGGAGGACGCAGTCCTG Variant GeneID:319141|GCAT:NM_001075134:16_cdna 332^433 4 EMBV3_21387 GeneID:319141 5 GENE GCAT NULL glycine C-acetyltransferase EMBV3_41197 TGCCCTCCACTTCCAGCCCTCAAGAGGTAGCCAAAATCCCCAAACAAAGTCCACAATCAG Gene GeneID:782902|VSTM2A:NM_001083528:2_cdna UTR3_Alt 3 NULL GeneID:782902 4 GENE VSTM2A MGC142894 V-set and transmembrane domain containing 2A EMBV3_00249 GCTGGCCACTATTTACGCTGCTCAGAGTAGCCGACGACAAGGCCAACACACAGCTCCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21519 CTGTGTCTCGGGGGTCTGTGTTTTAGGCCTCGTTTCCTTACTAATTATGTGACACTGGGG Gene BVT0102_028785 - 0 NULL GK000011.2:25586724-25632187 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19361 GTAGAAGATTCTCTGATGCTCCAAATCCAGCTACTTCCATAGGGCAGCCTGGACAAACGC Gene GeneID:507711|ADHFE1:NM_001101887:16_cdna Constitutive 0 NULL GeneID:507711 14 GENE ADHFE1 MGC151687 alcohol dehydrogenase, iron containing, 1 EMBV3_20644 AGCTCCGGGAACTAGCCGCCAAGGGTTACAAGCTGGTGATCTTCACCAACCAGATGGGCA Variant GeneID:616621|PNKP:NM_001083522:394_cdna 721^801 2 EMBV3_27469 GeneID:616621 18 GENE PNKP MGC143056 polynucleotide kinase 3'-phosphatase EMBV3_23786 CTTGGAGATGGTCTTGATCCCTGTCTCCTGTACAATGTCATGAAGCTCCATCCACAGTTC Gene BVV0102_459642 + 1 EMBV3_00309 GK000002.2:5044967-5131710 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170957 TCONS_00040522 TCONS_00060488 TCONS_00060490 TCONS_00200492 TCONS_00060495 TCONS_00238990 TCONS_00240765 TCONS_00253925 TCONS_00107634 TCONS_00078868 TCONS_00012522 TCONS_00170954 TCONS_00233568 TCONS_00060491 TCONS_00030341 TCONS_00029932 TCONS_00060497 TCONS_00012520 TCONS_00250647 TCONS_00170956 TCONS_00231011 TCONS_00012521 TCONS_00060493 TCONS_00217917 TCONS_00022660 TCONS_00060496 TCONS_00102592 TCONS_00180525 TCONS_00031458 TCONS_00060489 TCONS_00006998 TCONS_00060492 TCONS_00170958 TCONS_00116551 22 XLOC_103690 XLOC_024338 XLOC_036754 XLOC_122144 XLOC_145656 XLOC_147429 XLOC_156863 XLOC_063544 XLOC_047753 XLOC_007883 XLOC_143050 XLOC_016594 XLOC_016187 XLOC_153590 XLOC_140500 XLOC_131606 XLOC_013330 XLOC_061901 XLOC_110292 XLOC_017706 XLOC_002560 XLOC_070718 Coding TCONS_00012520 XLOC_007883 Coding Coding BHMT 10:10147187-10152189 j TSS9496 1995 2 TCONS_00012520_2 71 0.268170426065163 3 0.601679664067187 0.000440507513705249 0.000478748756548862 0.000955989849994326 0.000134319211728988 0.000249514424041447 6.98649914970913e-05 0.000607143813396815 0.000242775568216186 0.000221983483364499 8.35734351391253e-05 3.23804281680842e-12 9.19169689390470e-11 7.32443905954223e-11 7.25113699697235e-11 2.99676249696141e-08 7.92574310505845e-10 1.0010259339924e-07 1.47764331212076e-09 0.000206849547087553 0.00122983362020152 3.45796518228587e-11 0 4.54358312811123e-08 1.21335680864168e-09 0.000408791628797465 5.09339015806635e-08 0.000218095289553691 0 3.26202979621714e-08 2.89092192912355e-08 XM_005211265.1 BHMT PREDICTED: Bos taurus betaine--homocysteine S-methyltransferase (BHMT), transcript variant X1, mRNA. 0.0 1772 100.00 0.491729323308271 NM_001713.2 BHMT Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), 0.0 917 76.68 0.644110275689223 TCONS_00012520_2 sp|Q5I597|BHMT1_BOVIN BHMT1_BOVIN Betaine--homocysteine S-methyltransferase 1; 1e-44 150 100.00 0.985915492957746 0 coding 0 0 0 0 -0.14077896576153 0.397300454388436 -0.0817267875438511 0.167600609519459 AGTGAAGACTCTGCTTCTGGTTCTAGCTCTGTTGCTTAGTGGCAGAACCTTAGCAAAGGTCCGTAGTTCACCCAGATCTGGATTTTCTCATCAGATAAATAAGGACTGGAACCCAGAGTTGCAACCAGATGGGATATTCAAAAGTATGCCAGAGAGGCCTACAACCTGGGGGTCAGGTACATAGGTGGGTGCTGTGGATTTGAACCCTACCACATCAGGGCAATTGCAGAGGAGCTGGCTCCGGAGAGGGGATTTTTGCCACTGGCTTCAGAAAAACATGGCAGCTGGGGAAGTGGTTTGGATATGCACACCAAACCCTGGATTAGAGCCAGGGCCAGGAAGGAATACTGGGAGAATCTTCAGATCGCCTCGGGCAGGCCGTACAACCCTTCCATGTCAAAGCCGGACGCCTGGGGAGTGACCAAAGGAACAGCCGAGCTTATGCAGCAGAAGGAAGCCACAACGGAGCAGCAGCTGAGAGAGCTCTTCGAAAAACAGAAGTTCAAGTCTGCACAGTAGCCTCGATAGAAACCATTTTTAGTGACTTCCTCCAGGCTTGGGCCACAGTTCCAAAACTAAGGAAAAGATAGTTAAAAGGCAATGCTTATACAAATGCCAGCTTACGCGTCAAGATTGACAGGAACTGAACAAAACAATTATAAATAACACTTGACCATTTTTTAAAAGTATGTATTTAGAACTTGGAAGCAAAATGAATAACAAGTAAATCTTAAACTGGCTTACTAAGTAAACCAGGTACACGGTATTAAGGAAATCACTGTGGCCAAGAAAAAATAATTTGGACAATAGTCCTACTTTAAAAATTTCACAGGCTGGTAAGAAGGATGAGATGTGAGCTGTCATAAATGGTGTAGCAACCAGACAAGTGCAAAGTGCTATAGGAAAGTGACTTTCAAGCTTTTTGGAAATGGCCCTTAATGAGAAACACAATTTATATAATGACCTGGTAAGGCACATGTACAACCATTGAAATAAAATGTGATCCATTCTGATATTTTTAAATTCCATTCCTTTCTGTCCTATTTCATTAATAAAATATGCTGGTTAAGGCCTTTTAAATTGATTTTATGACCATTAATTGAAAACCACACATTGAAAAAACACTGCTAAGGGACATTTCAGCTATAGGGACTTGGCTATTCCTTTACATTTCTCCTTAGAAAATCAGTCCTATGGGACCAGATTAGTAAACATTCAAAGCTTAGAGTCCTGCTGTCTAGAGTTCCAGAGTTGTTCCCTCTTTTCTGACCCATTTCCACCACTAAGAAGCATTCAGACCAATGGGGAGGCCAAGAAGGGATTGGTACCAGGCTCTCTCCATTCTGCCTTAGGCTGGATCCACCTAAATGCCTCCAGTCAGTAAGGCTAGTGAGAAATGGTCTTGAAATGGCCACCCACTCCAGTATTCTTGCCTTGAAAATCTCATGGACAGAGGAGCCTGGGGGGCTACAGTTCATGGGGTCACAAAGAGTAGAACATGAGTAAGCGACTAAACACAAAAAGGTCTAATAAAAAGAGATTTTCCAAACTCTGTTAGGGTTTCCTAGATTGAGAACTATATTTTCTCCTGGTAATACCTACTCTGAAAACTCAAGCCTGAAGATGTAAGATCACTGGAATAAATGACTACTCATTGTATTAGAAAAGAGTTCATGCTTCTTTCTCAACATTCTTGGATTGGTGTGGCTGCTTTGAAACTCTTAATTTCTTCAGCTATTAAAAAAACCAATAAGACTACCTTGGATGTATTTGATTCTGTTCCATAATTTGCTATATACAGTGGAAGTGACAAATAGATTTAAGGGACTAGATCTGGTAGACAGACTGCCTGATAACTATGGATGGAGGTTCATGACATTGTACAGGAGACAGGAATCAAGACCATCCCCAAGAAAAAGAAATGCAAAAAAGCAAAATGGCTGTCTGGGGAGGCCTTACAAATAGCTGTGAAAAGAAGAGAAGCGAAAAGCAAAG EMBV3_18746 GATCAGGGCGGGCTCGTTCCAATCCAGGTCCTGCGCGATCATCTGGAAAGCATTAGAGTA Gene GeneID:100140685|LOC100140685:XM_002686661:104_cdna Constitutive 0 NULL GeneID:100140685 4 GENE LOC100140685 NULL hypothetical protein LOC100140685 EMBV3_35590 TGTTGCAGAAGGGATGGTGGATCCCAACCTAAACCCCATTTCGGCCTTCCGACTTTCAGT Gene GeneID:282276|MGAT4A:NM_177520:11_cdna Constitutive 0 NULL GeneID:282276 11 GENE MGAT4A NULL mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A EMBV3_14048 TAAGGGACATCGAGCTGTTTGTGGGGAAGCTGGATGAGGCCCAGTCTAAGACCAGTCGTA Gene GeneID:504611|EPS8L3:XM_002686186:398_cdna Constitutive 0 NULL GeneID:504611 3 GENE EPS8L3 NULL EPS8-like 3 EMBV3_32091 GTCCATGGGGTCGCAAAAAGTTGTAAAATGTGTTTTTGTATTTCCTTTAGGTTCAGCTTA Gene GeneID:514131|BCNT2:NM_001077919:100_cdna Constitutive 2 NULL GeneID:514131 18 GENE BCNT2 P97BCNT2 bucentaur-2 EMBV3_03997 CTCACCCAAGGAAACCCAAATATAGTAGATCGGAGATTGGAACCTAGACCTGTCTTGTTG Gene BVV0101_054634 + 0 NULL GK000019.2:56701909-56754111 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101013 1 XLOC_061255 NonCoding TCONS_00101013 XLOC_061255 NonCoding NonCoding - 19:56750895-56751221 - TSS75389 326 0.576687116564417 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000195646039267263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_005227966.1 MDR/TAP PREDICTED: Bos taurus ATP-binding cassette, sub-family B (MDR/TAP), 2e-17 93.3 94.92 0.177914110429448 0 noncoding 0 0 0 0 -0.0163655062113521 0.923455623289288 0.00308901530253179 0.948114634772177 CATACTAGAACAGTTTCAAAGTAGGGGGAAAATATGGGTTTTACAACAAGACAGGTCTAGGTTCCAATCTCCGATCTACTATATTTGGGTTTCCTTGGGTGAGTTTCTAACCTCTTTAAGCCTCAAATTCCCAGTTTGTGAAATGGGGATGTTATACACAGTAGAAACACTGTGACTTTAGTACAAGTCAGGAGGTAAATAGATACCTCTTGTTGTTTCCGTGTCAGATATCTCCTGCTTAAAAACCTGAGAGGTTGTTACTTGTCAGATCAGATCAGATCAGTCGCTCAGTTGTGTCTGACTCTTTGCTACCCCATGAATTGCAG TCONS_00094714 . 5' 2876 TCONS_00094714 . 5' 2876 EMBV3_03219 AGAAGCTGGCGCCCTTCCTGAAGATGTACAAGCAGCGAGGCCTCAGCTAGCCTGACCCTG Variant GeneID:512593|FGD2:NM_001075570:26_cdna 750^844 1 EMBV3_04881 GeneID:512593 23 GENE FGD2 NULL FYVE, RhoGEF and PH domain containing 2 EMBV3_19348 TATTATCCGCCATTGTTGGAATGAGAAAGCCAAGTCCGTAAGAAGCGCCAGGTTCCAGTG Gene BVV0102_309607 + 0 NULL GK000030.2:124937396-125003774 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245640 TCONS_00248205 2 XLOC_150785 XLOC_151541 Coding TCONS_00245640 XLOC_150785 Coding Coding - X:124998752-125005244 - TSS184352 1976 1 TCONS_00245640_6 490 0.162449392712551 2 0.695886612232322 0.000103282025997374 4.06819741992602e-05 0.000215504742101958 4.20250241191641e-06 0.000214877172597198 1.81025083680372e-06 7.93734380387034e-05 0 1.02542263729128e-05 2.98548385639273e-12 0 0 1.83397888351603e-06 0.000112148302817021 1.12429027254053e-05 0 0 0 5.08062805680263e-05 0 3.0726026822899e-06 0 0 0 9.46704828594959e-05 0.000135267179972013 3.55819000904671e-05 0 0 0.000158217346190814 XM_005200816.1 LOC616695 PREDICTED: Bos taurus serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like (LOC616695), transcript 0.0 2415 95.79 0.757085020242915 NM_014225.5 PPP2R1A Homo sapiens protein phosphatase 2, regulatory subunit A, alpha (PPP2R1A), transcript variant 1, mRNA. 0.0 1680 84.54 0.760627530364372 TCONS_00245640_6 sp|Q76MZ3|2AAA_MOUSE 2AAA_MOUSE Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform; 0.0 796 80.00 0.997959183673469 4 coding 0 0 0 0 -0.0653976511521599 0.659035376295206 0.0141579485964917 0.775249996970987 CAACGATATTGCTGACCTTGGTAGCACTGGGCCTGCGCACCCACTTGGCCATGGGCCACTTTTGTCTGTCCTAGCATATCAGTAGTCTTTGAAGACTCCCTGTGGCGGCGGCTGCTGCCCAGAGAGAATAAACATGACTGCAGTCCCCACAGCTCTTCAAGTCTTCTTCCATCTTCCCCGGTCACTCCTTATCTACTCTGGGTTCAGTGAACAGTGTGAGCGGCAAGACAACTACTTACCATGAACACGGGATTCCGAAAGTACTTTATATCCATGATTTTCTCCAACTCTTAAGACAATTTCTGTGAGGAGAGCATTATTATCCGCCATTGTTGGAATGAGAAAGCCAAGTCCGTAAGAAGCGCCAGGTTCCAGTGATTATAACCAGCCACCTGGGTTCTATCTTCTAAACCACGCAGCTGCTGCTTCTAAACTTCAGGAATCCTGAGAAGCACCAGCTGAGAGTGACAGAGCAAAGCGCTGGCTGCAGTCTGAGAGGAACAAAGATGGCAGAGCCTGACAGCGATGACTCGCTCAACCCCATGTCGATCCTCATAGACGAGCTCCAGAATGAGGACATTCAGCTTCGCATCAACAGCATCAATAAGCTGTCCACCATCGCATTGGCCCTTGGAGTCGAAAAGACCCGCAGTGAGCTTCTGCCCCTCATTATAGACATCCTATACGACGAGGACGAGGTCCTCTTGGCCCTAGCGGAGCAGCTGGGCACCTTCACCCCTCTGGTCGGAGGTCCTGAGTATGTTCACTACCTGCTTCCACCCCTAGAGTTGCTGGCCGTGGTGGAGGAGGCCATAGTGCGGGAGAAGGCGGTGGAGTCCCTGAGGGCCATCTCGCATGAGCACTCACCCTCCCATCTCGAGGACCACTTTGTGCCACTTGTGAAGCGGCTGGTGGGCGGCGACTTGGTCAACTCCCGCATCTCAGCCTGCAGCCTTTTCTCCGTCTGCTACCCTGGCGTGTCCATTGCCATCAAGGCAGAACTTCTACAGTGCTTCCGGGATCTGTGCTCAGATGACAACCTCTTGGTGCGGTGTGCAGCAGCCTCCAACCTGGGGGATTTTGCCAAGGTGCTTGAGATTGACGACATCAAGAGTGAGATCATCCCCATATTCTCCAACCTGGCCTCTGACGAGCAGGATTCGGTGCGGCTGCTAATGGTGGAAATGTGCGTGAACATCGCCCAGCTCCTGCCCCAGGAGGCCCTAGAGGCCCTGGTGATGATCACTCTGTGCCACGCTGGCGAGGACACATCCTGGCGTGTCCGTTACATGGTGGCTGACAAGTTCACAGAGCTCCAGACAGCAGTGGGGCCTGAGATCACCAAAACGGGCCTGGTCCCTGCCTTCCAGAACCTGATGAAAGACTATGAGCCTGAGGTGAGGGCCGCTGCCTCCCACAAACTCAAAGAATTCTGTGAAAATCTCTCAGCTGACTATCGGGAGAATGTGATCCTGACCGAGATCTTGCCTTTCAGCCAGGAGCTGGTCTCAGATACCAACCAGCATGTCAGGTCAGCCCTGGCCTCCGTCATCATGGGCCTCTGCCCCATCCTGGGCAAAGATAACACCATCGAGCACCTCATGCCCCTCTTCCTGGCTCTGCTGAGGGATGAGTGCTCTGATGTGCGGCTGAACATCATCTCTAACCTCAATTGCGTGAAAGAAGTGATTGGCATCCAGGAGCTGTCTAAGTTCCTGCTCCCCACCATCATGGAGCTTGCGGAGGATGCCAAGTGGCGGGTGCGTCTGGTCATCGTTGAGTATATGCCTCTGCTGGCTGGACAGTTTGGGCTGGAGTTCTTTGATGCACAGCTCCACTCCTTGTGCATGTCCTGGCTTGTGGATCATGTCTATGCCATCCGCGAGGCGGCCACCAACAACCTGAAGAAGCTAGTGGAGCAGTTTGGGAAGGAGTGGGCCCTTGCCACTGTCATCCCGAGGGTCCTCACCCTGTCT TCONS_00245641 s 5' 244 TCONS_00245641 s 5' 6735 EMBV3_16612 GTCCAGTTTCCCTTGTGGGAGTCCTTAAAAGCTGGTTCCAGCACCGCGAGCGGGAACATC Variant GeneID:614713|SLC25A26:NM_001103297:62_cdna 808^942 6 EMBV3_19788 GeneID:614713 22 GENE SLC25A26 MGC166132 solute carrier family 25, member 26 EMBV3_39515 TCAGGGTTTAGCGATGGGTTTTTTTTTCCCCAGTGATGTTGACACGAAGCATAAAAAGAG Gene GeneID:504219|PRKAG2:XM_002686979:805_cdna Constitutive 0 NULL GeneID:504219 4 GENE PRKAG2 NULL protein kinase, AMP-activated, gamma 2 non-catalytic subunit EMBV3_34152 CGGGGCGAGGTCAGTTTGATCTTGAAGTTTAGGTTTTCTCCTTGCACCCTTCTGAGAGAG Gene BVT0102_188641 - 1 EMBV3_07578 GK000010.2:102887016-102920825 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04470 GTGGCAAAGCCTTTATTAGGAGTTCGGCCCTTACTCAACATCACCAAATTCATACCGGGG Gene GeneID:616720|LOC616720:XM_002695334:6_cdna Constitutive 0 NULL GeneID:616720 18 GENE LOC616720 NULL similar to mCG67989 EMBV3_18621 ACACTGCCTCCTCCTGCTGCTGCTGCTACTCACATGGCAGAAGATCATGGCTTGAGCAAT Gene GeneID:100295067|LOC100295067:XM_002694704:136_cdna Constitutive 0 NULL GeneID:100295067 18 GENE LOC100295067 NULL hypothetical protein LOC100295067 EMBV3_28626 AGGAGTTGTATGCCTGGGACAACAAGAGAGAAACCTTTAGAAAATCTTCACTCAGCAACG Variant GeneID:613554|COBL:NM_001078036:8_cdna 814^858 1 EMBV3_00400 GeneID:613554 4 GENE COBL MGC152242 cordon-bleu homolog (mouse) EMBV3_27405 ACGACCAAGTTACGGAGTCCCTGCCAGCAAGAGACAGTGTTCAGATGTGGATGATATTTG Gene GeneID:616080|RNFT1:NM_001076407:60_cdna UTR3_Alt 2 NULL GeneID:616080 19 GENE RNFT1 MGC138043 ring finger protein, transmembrane 1 EMBV3_22167 TGGTGTTCCAGGCAAATGAGAAGAAAGGGACGGGTCAAGGGTTTGGTGCTACAGTCGGAA Gene BVT0102_308990 + 0 NULL GK000002.2:11214605-11371449 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00150567 TCONS_00150568 1 XLOC_091903 Coding TCONS_00150567 XLOC_091903 Coding Coding C26H10orf26 26:23617756-23687746 = TSS112748 4135 1 TCONS_00150567_2 368 4 0.940976439154724 6.09566773149065e-05 1.14001516849912e-22 8.75536505955706e-11 6.37818614869515e-11 3.16334600057281e-06 2.55043489790618e-11 1.85573249289848e-05 3.9691618697065e-11 6.69149958923541e-11 0.000330925788596945 5.58336420942088e-05 0.000324520817869615 7.61953747441557e-12 3.77404392342039e-11 3.80529822069476e-09 0.0133871341868003 0.00217887153202303 0.00800323138815545 2.02738833614434e-29 1.13016133596516e-11 2.54808699763961e-11 0.00367303279924578 0.00123912709419216 0.00397688029068133 4.55842602972396e-11 4.53589160584069e-06 2.97283403759582e-11 0.00109527389325419 0.000273341677976367 0.00130171981852341 XM_002698456.3 C26H10orf26 PREDICTED: Bos taurus chromosome 26 open reading frame, human C10orf26 (C26H10orf26), transcript variant X1, mRNA. 0.0 7362 100.00 0.986940749697703 NM_001083913.1 WBP1L Homo sapiens WW domain binding protein 1-like (WBP1L), transcript 0.0 3561 79.09 0.996614268440145 TCONS_00150567_2 sp|Q9NX94|WBP1L_HUMAN WBP1L_HUMAN WW domain binding protein 1-like; 0.0 571 86.76 0.921195652173913 1 coding 0 0 0 0 0.0079676171433232 0.938235077459334 0.0256394489539891 0.726481390865563 AGGGAAGAAGGAAGAACAGGGAAGAGGAGGAGAGGGAGGAGGAGGAGGGAGGTGGCGGCGCCGTGGCGGAGGAGCAGGAGCAGGAGGGGGATGGCGAGGAGAAGGCTCCTGGGTGGCATGGCGCTCCTGCTCCTCCAGGCGCTGCCCAGCCCCCTGTCAGTCAGGGCTGAACCCCCGCAGGACAAGGAAACCTGCGTGGGCACCAACAATCAAAGCTACATCTGTGACACAGGACACTGCTGTGGACAGTCTCAGTGCTGCAACTACTACTATGAACTCTGGTGGTTCTGGCTTGTGTGGACCATCATCATCATCCTGAGCTGCTGCTGCGTCTGCCACCACCGCCGAGCCAAGCATCGCCTTCAGGCCCAGCAGCGGCAGCATGAAATCAACCTGATCGCCTACCGGGAAGCCCACAATTACTCAGCGCTGCCATTTTATTTCAGGTTTTTGCCAAACTATTTACTACCTCCTTATGAGGAAGTGGTGAACCGACCTCCAACTCCTCCCCCACCATACAGTGCCTTCCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCTACCTGCACAGTGTGGCTCTGCAGGCAGCAGCCCCCCAGGCACCGACCCCACCAGGGGCTCCCAGGGGGCTCAGAGCAGCCCCTTGTCCGGGCCCAGCAGAAGTAGCACGCGACCCCCAAGCGTCACTGACCCTGAGCCCTCCGACATGCCAGCAGACCCAGCAGCCACCAAAACCTCTGGCATGGAGCCCGGCGGCTCTGTGGCTGGCCTGGGGGAGGTGGACCCCACGGCCTTCCTGGACAAGGATTCTGAATGTAAGGAGGAGCTTCTGAAAGAGTACAGCTCTGAGCAGGGCAGCGCCCTCCCTGACAACAAAGACAAGACACCTGGCAGACATCGCCGCTTCACGGGTGACTCAGGCATCGAGGTGTGTGTGTGCAACCGGGGCCACCATGACGATGACCTCAAAGAGTTCAATGCACTCATCGACGATGCTCTGGACGGGCCCCTGGACTTCTGCGACAGCTGCAATGTGCGGCCACCTGGCGACGAGGAGGAAGGTCTCTGCCAGCCCTCCGAGGAGCAGGCCCGGGAACCCGGGCATCCACACCTGCCAAGGCCGCCTGCCTGCCTGCTGCTGAACACCATCAACGAGCAGGACTCCCCAAACTCCCAGAGCAGCAGCTCCCCCAGCTAGAGCAGGTCCTGGCTATACCTGAGATCTTGGCGATGCAACCAGGGTAGGGGAAAACCATGCGAGAAGCATTAATAACTGTGTTCCTTCCCCCGCACCCCCTGCTCCTGCATTTTCCTGCATCTCCAGGTACAGTTTGGGGTGTGGGTGGCTTGCCCCCCACAGAAACACAGTGCTGTGGAGGGCTGAGAAGTTACCCTGTGACTCATTCCTCATACCCCACCCCATTCCCCTTTACCTCTTTTAAAGTCACATCTCACTGCCTGCTTGGGTCAGAGAGATGTGTGTTCAAAAGCCCCCAAGGAGGGAATGAGACCGTGCCCTGAGGTGACTCTTGGTGATGGAATGGATGTGCTTTCCGGTGTTAGTTTATGAGAACCTCGCTGCATCTCTGTCCAGAGGAGGTGGCTGGTCTCAGCCCTGGATGAAGAAGGAAGCTCACAGAGGCCCAGGGATTGTCTCCCCTTGCTACCAGCATCTGTGGAGCCAGAATCGTGTTCTGCTGTGGTGGGGAGGAGAGTTGACTGGCAGTTGTGTGGTGGATTGGTAAGGGACTTGTGCTCTCAAATTCCAGCTGACGAGCTCGCGGTGCCAGGGTGTCCTGGAGGGGCCCCTCCCTTCTCAGCAGGATCTGGCTGGCCACAGGCTGGTTCCAGGCTGGAAGATTATATACCTGCCTTTTTTTTTTTTTTTAAGAAAAAAAAAAACAACAACAAAAGCAAGCTGAAAACAAGAATTTGACCAGTGGGCAGGCAAGAATTCTGTTTTGGAAAAGGGAAATTTGTGTCTTTTTCTCAACTTGGCCTTCAAAGAGCCTGGCTATAGTTGAGCCAGGAGATACATAATGTGCAGGCTTGGGTGGGGGCTGTCTCTGGAACTCCTGTGGATGAGCAGGAGGCCCTGCAGTGTGGCAGCGGATGGAGGTGCAACTTCCCGTTGTCTCTGCCCTTTGATCTGCACCCATGGGTGACCAGTGCCCTCCCCCCATCCCAGACACACGTCTGCCAGCCTTCACGTCTCACTGTTCTCTACGAACAAATGAGGCTGTGGGTCCTGAGGAAGGGCAGGCCCACAGTCTGGCTCTCACACAGTATTTTCTCTTGATTCTGAATAAGTTGTTTTGTTTATTTGTTTATTTTTTCAAACTGACCACTTGGAATAAGAATGCCTTGGTTATCTGTGGTTTTCATGCCCTTTGCCTGCTCCGCACCACCCCTTGAGTGGGGTATCTGATTTTTGTAGCCTATGTAAAGAGTCTCAGTGGCCCAGATAGGAGGGTGTAGGCAGCCCTCCTGAAGGACCACAGGATCCTTGATTCCTGTAGTTTTGCTTCAGAAACCAGGTGAGCTTTGATAGGAATAATCTGAATGGAGAAAGCAAACTGCCGAAACTAACATTCCCTGCCCAGCCCTGTTCACATGAAGAGCTTGGTTCTTCCCCCACTCTTGAATGATGATATTCAGAGTAGGCGTTGACGTTTTGGTTAAGAAAGGAAGGTATATATCTGTATATATATGAATACACACGTATCTATGTGTATGTGTGTATATATATATGTATATGTATATAAACACATACACACAAAATAGACAAATCTGAGGCTGTGAGGTGAACAAGTGTCTGCATTTGGAGTCCACAAAACCAAAATCCATGTTGAACAAGTGCAGTCTGTATACGATGACTTTTCCAGTAACCTGTGTGTGTCTGTCCATTGTGTGTGAGCCCCTAGCCCTGTTTTCCTGTGAATATACTTTGAACGGCAGCCACTCTGTTCACATTACCCATGCGTTCGGAGCAGGCGCAGCCCTCTCAAGGTAATTTATTTTACGCATTTACTGTTTACTGAGCAAATGTCTGACTGTGCACTTGGGTGTACTCAGCAGTGCTGTTGACGGCAGTCTCCACGTTTGCCAGAGATACTGTGCTCCAAGTAGAGGTTTTACTCTACCCCTCACTGCAATTTGCACATTGCTCTATGGACACACGGAGGCCTGTGTCCTGTTCCCTGTAAGCGGAAAGTGCTCTGAACCTGTCTGCTTTCCCCAGCTGCTCCCAGCCCTTGGCATCAGCCCCCAGGAGGGTCCAGACCCCCTCAGGACAGAGGGCCAAGGTGGAACCTCAGACAGAAGCTTGACTGGATCTTCAAAGTCAAGCTCAGACTGGCTTTGGCCCAGGCATCGGCCCTACCCAGAATTGCCAGGAGGCTTTGATGGCCACCACAGTGCCATAGGGCTTACCTCCCTCTGCTGAGGTCCAGCACGTGGCCGACGTGTGACCAGAGCAGGCAGGAGTGTGCCTGCAGCCCCCCTCAGATGCCTTTCCTGACGCCTTTTTTTTTTAATCCCAAACAACTCACTGAAGTGTCTCAAAGGCTATTAAGTTTTACCAAAATGAACCGTGTTGGAGTTAACTGGTTAAAGGGGTGGATTCTGGCCCTCTGAAGATTCCTTCTCCAGTCAGAGTGGGGAACTGGTCTGCAGGTTTACTGCTGGGTTCACTGCAGTGTCTGACCCTAAAGGCACGAGAAGAAAACGAAAATGCGGCGGGTGGAGCTGGACTCGAGTCCAGTGTCACCGCCTGGCCCCTGCTACATGAGGCTGCCCTGCACACGGAGGCACTGAAGTAGGGAGCTGAAGGACCCTTGAGGGGCCGGGCAGATTTGAGGGAGCCTGGTGTTCCAGGCAAATGAGAAGAAAGGGACGGGTCAAGGGTTTGGTGCTACAGTCGGAAGATTTGCAATTGCTAACACATTCCTGTGTGAGGCACATCACCCTTTGTCAGTTATTGTGAATATGTGTATTTTAAGCAATAAGATTCAGCTGGTCAGACTTTTCTGGGCAGTCTTGGTGACGCATTTCCTGTGCTGTGATTGTTCTGAGGACAGAGTGGCTCTAACCACTGTGAGAAGCCCAAATAAAAAATCCATCCCCAAAACCTGATT EMBV3_40259 TCCTCGGGGTTCTTGCCTTACTGTCCATAGTTCCTCAAGCCAGAAGCCTCTTTTTTCAGG Gene GeneID:100300649|LOC100300649:XM_002689453:44_cdna Constitutive 0 NULL GeneID:100300649 8 GENE LOC100300649 NULL hypothetical protein LOC100300649 EMBV3_27612 TGGAGATCAAGGTCTGCGATGGCCAGGAGCACGTGGTGACCATCTCTGTGAATAAGGACA Gene GeneID:504526|GAS6:XM_002692001:116_cdna Constitutive 0 NULL GeneID:504526 12 GENE GAS6 NULL growth arrest-specific 6 EMBV3_16090 TGCTGGTCCCATCAACTCAAGACTGGTTGCTCCTCCTCAAAACCAGGATGAAAAAGTCCT Gene GeneID:537028|MOSC1:XM_002693961:154_cdna UTR3_Alt 2 NULL GeneID:537028 16 GENE MOSC1 NULL MOCO sulphurase C-terminal domain containing 1 EMBV3_36876 AAGAGGTGCGAGTGCTCACACTGCCCCTGCAGGCCACCACGGTGGGCCAGATGGGCTGGT Variant GeneID:407235|ADIPOR1:NM_001034055:37_cdna 303^965 3 EMBV3_13558 GeneID:407235 16 GENE ADIPOR1 MGC127115 adiponectin receptor 1 EMBV3_21988 AGCCTGTCAGTGGCTTCTTCATTTACCTTTTGAGGATCCCTAACTGATGGTAGAGTATGG Gene BVT0102_050790 + 0 NULL GK000016.2:62545571-62641889 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067895 TCONS_00067889 TCONS_00067893 TCONS_00067888 TCONS_00067894 TCONS_00067890 TCONS_00067897 TCONS_00067891 TCONS_00067892 1 XLOC_041556 Coding TCONS_00067889 XLOC_041556 Coding Coding TOR1AIP1 16:62515999-62579501 j TSS50949 3426 1 TCONS_00067889_3 463 0.0283129013426737 11 0.946221319349302 0.000587631128471576 0.000518489658129475 0.00135057996861253 4.94084903085051e-08 3.52446934593462e-05 0.000587747948667638 0.000825143214733104 1.15012017225406e-13 3.64313937145474e-05 0.000111018290614247 4.91547977865718e-07 3.28412644843774e-05 7.42918101701218e-05 8.58645172578266e-05 6.26826636933955e-11 0.00012893598707629 1.237549308487e-26 0.000469605314001418 0.00210767844185335 2.14221476218858e-06 2.18483000581144e-07 2.6336122336447e-11 7.6443612976667e-16 5.46968371921628e-25 0.00175385009434834 2.65597987720326e-05 0.000419034938223233 6.22466956538651e-05 1.00881215892296e-17 5.49607472595174e-16 NM_001080344.1 TOR1AIP1 Bos taurus torsin A interacting protein 1 (TOR1AIP1), mRNA. 2e-154 551 100.00 0.088733216579101 NM_001267578.1 TOR1AIP1 Homo sapiens torsin A interacting protein 1 (TOR1AIP1), transcript 0.0 1914 82.17 0.561587857559837 TCONS_00067889_3 sp|F1N4E5|TOIP1_BOVIN TOIP1_BOVIN Torsin-1A-interacting protein 1; 0.0 897 96.65 0.997840172786177 1 coding 0 1 1 1 0.984621179267437 0.0565623782505644 -0.0212814945777246 0.683424436228022 ACATACCTTCGGTCTCGGCAGCGAAGGCAGCCCCGACTCCACGAAGCCGAGGAGATGCAGACGCGGAGAGCCGCTCTCCTCCAGCAGCAGCCGCACTCGCCGCCGCCTCCGCTACGACCCTCTCCGGTTACGACCAGAAGAGGATTACGGGACTCCCATTCATCCGAAGAGGATGAACCACCTTCACAAACTGTTTTAAGCCAAACGGTCACAAAGAAAGCTATCAGGAGAACACAAGAGACTCCAGTGATGAGTGAAGATCCTCTAATCAGCCTGCGTAGACCTCCTCTAAGAAGCTCAAGATCTGAAGCTGCCAGTGTCCAACAGAAGGTCAATTTCTTGGAAGAAGGGGAAACTGAGGAAAATGATCAAGACAGCTTTGACAGTGATGTTACTGTTAAGGTCAGATCCGGGGATTCTGTTGAGTCTGGAGACCAAACCACCAGATCGTCAAGTCAATATAAAGAATCATTTTGGCAGTCATCACAAAGTGGAGACTTCACAGCTTTTGATGAGCAACCATTGAAGCTAAGCTCAGGATATCAGAAAACTCCTCAGGAATGGGCTGAAAAAACCGTAAGAATAAGGACTAGGATGCTAAATGACAGTGTTCAGAAATCAGAGCTTGGAAACCAATCTCCATCAACCTCCAACCAACAAATGACTGGGCAACCCAAAAGTGTGTCTTCTGTCAAGACAAAGCGTTATTGGCCCTTTGCTGTGATAGCCGCTCTTCTCATTGGGGGTTTTTTGTACACTCGTCCTCCTGAAGCAGAAACCACTGCTGTTCAAGAATTCCAGAACCAGATGAAACAACTGATGAATAAGTACCAAGGTCAAGATGAGAAGCTGTGGAAAAGGAGCCAGACATTCCTGGAAAAACATCTCAATGGTTCTCAATCTCGGCCTCAGCCTGCGATTTTGCTGCTCACTGCCGCCCGAGATGCTGAAGAAGCGCTCAGGTGTCTGAGCGAACAAATCGCTGATGCCTACTCCTCCTTCCGGAGTGTTCCTGCCATACGGATCGATGGGGCCAGCAAAGCTACTCGAGACAGTGATACTGTCAAAGAAGAAGTAGACCAGGAACTGAGCAATGGATTCAGAAATGGCCAGAATGCGGCTGTGGTCCACCGCTTTGAGTCACTGCCTGCAGGCTCTACTTTGATCTTCTATAAGTATTGTGACCATGAAAGTGCAGCCTTCAAAGATGTAGCCTTAGTCCTAACTGTCTTGTTGGAGGAGGAGACGCTCGGAACCAGTCTAGGCCTAAAGGAAATTGAAGAAAAAGTGAGAGATTTCCTCCAAGTCAAGTTCACCAACTCTGACACACCCAACTCCTACAAACATATGGACCCAGACAAATTGAGTGGGCTCTGGAGCCGTATTTCTCACTTAGTCCTGCCTGTACAACCTGAAAATGACCTGAAAAAAGGCATCTGCTTATAAAGGAAGACAGAAGAGAAAATTAAGTCTCAAGTGCTGAGAATTTTTTCAAACTTTAACGAGACAGCACTCAGTTCTTTTTGAAAGAACTGTTTTCTTTTTAAAGGAGGTTAGGTTCTTAGGTAAACATAGAACATCTGTATTGTTTATTCAGCCTAATTATCTGTTACCTAAGAGACTCGTTTCCCACTGAGATCTGTGTAAATGATATCTACAGACTATAAATTATATACAGTCCCATAGAGGATCTGCTTAGATTCCGGAGTGAGTCATTATTGCTGTGGTATGACCAGTGGGAGGGATTTGGCTCCTTCCTGTAAATCCTCCCCAATTTTTTAATTTGGATTTTTTTTCACAGAGTTTGTTATTAGTAAGACAGCTCCCTGAACGCAACTGTGGGCTTTCCTGTTTTGTTCTCTTTTTACATCATTTAGATGTGAATTCCTTAGTCAGCTTCTCCTTATAGGAACAAAAATAATGAAGGGCAATAATGAAGAGCCATCTGAGTGTTTGGGTGTTTCTTTCTTTTTTTCTTTAATTTTGGAGGGCAGGGAAAAGGAGACCAGGGAAAAGTTGTGGAATGGAGAAAGAAAGGGGAGGAAAAGTCTTCAAGATGAAATATTAAAATAAGTCACTGGGGGAATTCCTTGATGGTCTAGTGGGTGGAACTCCATGCTCTCACTGCCAAGGGCCTGGGTTCCATCCTTGGTTGGGGAGCTAAGATTCTGCAAGCCACCCCATGCACACTCAGAAATTAAAAAAAAAAAAGGTCACTGTCACCAGGGGTTCATCAAACATAGCTGTATGAACTCCATTCTCAGTGAATTCTGTTGGGACTTTTATTTTTCTTTAAGAAATTTTTATTCCTCCCAAGGATTCTGAAGCATGTATATGATGAGGTTTAGTATATTTGCTCACTTGGCTCTTAAGAACAGGCAAATCCAGGCAGTTTATTTTGTTCATATCCTGAAAATTTTGTTAAGAAAGATAATGTCAGAAGTTGGTAAACCGTTTTGTCAACCACCTGTCAGTGACTGAAGAGGGATTTGATTTTCTGAATGTCCATTTGTTGCAGTCTACGTCCTTTAATGACACTCTTGTAACAAGTATAAAGACTTACTCTGCACGTGATAAATTCTATTGAGTGCCTCAAGCCAAAAAGAAAGTGAAGTTTACTGTATATGAAGGATGTTAAGATGTACTGCTGTATATAACTGTACCGTAGGATTTCAGTTTTAACTTTGCATCTCTTAACAGCTTTCTCATCTGTCAACAGCTTTAGTTTTCTTAGAATCTTAAAATTCTGGATCAACTTTCTTTATTTTTTTATTGTCTACAAACCTTTAAATGACAATATTGTTTTTAGAATACTAAAGCCTGTCAGTGGCTTCTTCATTTACCTTTTGAGGATCCCTAACTGATGGTAGAGTATGGTCTTATTTCTTCCCACTAGGACTACCAATATTCATAAATTTATACTACTTATTATAATTTGTTCCCGACACTGTCAGAAGTCAGATATTCTTGATTTATAGAGGATTCTAAAATAAGAATTTTTGAAAAGGCTTATTTTATACATATATGTATTATACGGAGAAACAGATGTTTTTATTAACTGTTTCATTGACCAAAATTTTAAAATAATATTACTTATATCAGGAAAAATAATTGTAGCAGCTAATCTGTAAATGACTTTAAAAGCTATTTTAGTAATTTAAATAAATTTACTTTTTTGGTTTGTACTCTGTGTGTTGTACGTTTAATGACTCGTATACCTTTTAAAAAATTATTCCTAGGGTTTTCTTTATACTTGAACAATTTTAGTGACTTCTGCTTGGAGAAACAAAGGGCAAAGAGAAAACTGGAGCTGCTCACAAGTACGTTGGTAGAAAATACAATCACTGTGGTTTTCTGTTTCATCTGGGGATTTTGAATTATCACGAAAGTTGAATTAAAGTATTCCTCACTTGGTAAAAATCTACA EMBV3_32989 GTTCTTCGTCATCTGGAGTCACCTTTCCCCCTCCCATGTGCTTTCCCTCCTTGGAGATCT Gene BVT0102_125591 - 0 NULL GK000015.2:82312549-82336095 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060327 1 XLOC_036681 Coding TCONS_00060327 XLOC_036681 Coding Coding ZDHHC5 15:82334997-82354379 j TSS45122 4167 1 TCONS_00060327_9 612 10 0.785511583509623 0.00336449748672923 0.00166195845218728 0.00208789965314125 0.00107324354365057 0.00168664637922589 0.000303958524055905 0.000741526043837399 0.00129673251733936 0.00114239980158974 0.000446028313911442 0.000177788491747285 0.000593897791034989 0.000177613362643411 0.00167717832481036 0.000451115911820409 0.0017881469288315 0.00038708219512179 0.000119621493146608 0.00136928351689535 0.00287339390612501 0.00102113418201965 0.00145256838462936 0.000973839668824884 0.00132474577861732 0.00258217995720983 0.0014171253521091 0.00139004421226609 0.000460769870637922 0.000142905926415157 0.000332990152213916 NM_001192763.1 ZDHHC5 Bos taurus zinc finger, DHHC-type containing 5 (ZDHHC5), mRNA. 0.0 5341 99.97 0.711063114950804 XM_005273889.1 ZDHHC5 PREDICTED: Homo sapiens zinc finger, DHHC-type containing 5 (ZDHHC5), transcript variant X1, mRNA. 0.0 2702 83.62 0.59371250299976 TCONS_00060327_9 sp|E1BLT8|ZDHC5_BOVIN ZDHC5_BOVIN Palmitoyltransferase ZDHHC5; 0.0 1233 100.00 0.998366013071895 1 coding 0 0 0 0 1.10500908652219 0.0444213536243605 -0.0067849050030406 0.926985673365752 CCAGGTGAGGCACCATAACCTAGTTGAACTCTGTATCCAGAAAGCCCAAGATTAAAGAAGATCAGAGACACTGACTAACCTGGAAACAGGGACCTCTTGGGAATTTTGCTTTCATCCACAGTGACCTTCCAAACATATCATCAAGTGGAATTGATTTTCTTCATTTTATTTTGCTTATTGGGAAGAACATGGCTTCGGGAATTTTGTGTTTCCCTTCAGTTTTGCATGAACTCTGCAGGAAACGGAGCCCTTGAAGGGTTTGGGAGTAACGAGAAGAGACTGAAGACGGACAGGCTTGCGCCCGTGCACACCCTCGGCTCTGTTTTCCCTCCCCCCTTCAAAGAAAAGGATTTACAACTCAACCTTGTAACAGCTGCTGCCCAGCTTTAGCCATCAAGAGAAAGTAAATAAAATTAAACCACGACTGCCACTGCCAGACGACAAGGCCTGAAGTCCAGGTGTGGGAGTGGTGGCGTGGAGAAAACCGCCTGAGAGGGACAAGGACTGCAGTGACGGCAGTTCTCTTTAAAGCTGGAAGGGGCCCCAGGTCCCTTCTTGGATTGAAGTAGAAACACAGGGCACCTCTCTCGGGGGCCGCTCACCCTCCGGTGGGAGTGAGGTGGTCCTGGTGTCTCCTCGGAAGACTTTTCCTCGCGAGAGGTGTTCCGTGCTCCCCCGCCTCCTCCCCTCCTTCCCTGCGGAGGACCTGCCTCCCTCCATGCGCTGTTGCCCGGCCTGCCCAGCCGCCCGTGCTCTCTACCTGCGGCCCTCTGCATGTGTGCGGCCTCCTGTGTGTCTCCGGGTCTCAAGCTGTACCGCTTGTGTTTCTTAATCGCTCCTCCCGCCTTGCTCTGGGGAGCTGGTTCTTCGTCATCTGGAGTCACCTTTCCCCCTCCCATGTGCTTTCCCTCCTTGGAGATCTCTTGACCTTTGCTTTGATTTGGGAGGGGGAAGGGTGGTGGTTCCAAGCTTTCTGTGTCCCTGGTTTCCTCGGTCCTCCGCTCTCCGTGGCCTCCCCTTGTCCCGTGTTCTGGTCTGTTCTGCCGCTGTGTGGGCCTGTGCTATGCGGCAGGGCAGATCTCCCAGCAGAGCTCCAACATGCCCGCAGAGTCTGCAAAGAGGTTCAAACCCAGCAAGTATGTTCCCGTCTCAGCAGCTGCCATCTTCTTAGTGGGAGCCACAACCCTCTTCTTTGCCTTTACCTGAAGAGGATGAAGACAAAGAAGACGACTTCCGGGCGCCCCTTTACAAAACCGTGGAGATCAAGGGCATCCAGGTGCGCATGAAATGGTGCGCCACCTGCCGCTTCTACCGGCCTCCCCGCTGTTCCCACTGCAGCGTCTGCGACAACTGCGTGGAGGAGTTCGACCACCACTGCCCCTGGGTGAACAACTGCATCGGCCGCCGGAACTACCGTTACTTCTTCCTCTTCCTCCTCTCCCTGACGGCCCACATCACGGGCGTGTTTGGCTTCGGCCTCCTCTACGTCCTCTACCACATGGAGGAGCTCTCCGGGGTCCGCACGGCCGTCACGATGGCCGTGATGTGTGTAGCTGGCTTGTTCTTCATCCCGGTCGCTGGCCTCACGGGGTTCCATGTGGTGCTGGTGGCCAGGGGACGCACCACCAATGAACAGGTCACGGGTAAGTTCCGGGGAGGCGTGAACCCCTTCACCAATGGCTGCTGTAACAACGTCAGCCGTGTTCTCTGCAGCTCGCCAGCGCCCAGGTATTTGGGGAGACCAAAGAAAGAGAAGACAATTGTCATCAGACCGCCCTTCCTTCGGCCCGAAGTGTCAGACGGTCAGATAACCGTGAAGATCATGGACAATGGCATCCAGGGGGAGCTGAGGAGGACTAAGTCTAAAGGCAGCCTGGAGGTAACAGAAAGCCAGTCAGCAGATGCAGAACCGCCCCCACCTCCTAAGCCGGACCTGAGCCGTTACACGGGGCTACGGACACACCTCAGTTTGGCCACTAATGAGGAGAGCAGCCTCTTGGGCAAGGACAGCCCCCCTACACCCACCATGTACAAGTACCGGCCGGGCTACAGCAGCAGCAGCGCATCAGCCGCCATGCCTCATTCATCCAGCGCCAAGCTGAGTCGCGGGGACAGCCTGAAGGAGCCGCCCTCCATCGCAGAGAGCAGCCGCCAGCCCAGCTACCGCTCGGAGCCAAGCCTGGAGCCTGAGAGCTTCCGCTCGCCCACCTTGGGCAAAGGCTTCCCCTTTGACCCGCTGTCCAGTGGCTCGCGCTCCTCCAGCCTCAAGTCCGCCCAGGGCACGGGCTTCGAGCTGGGCCCACTGCAGTCCATCCGCTCCGAGGGCACGACCTCCACCTCCTACAAGAGCCTGGCCAACCAGACGCGAAACGGGAGCCTGTCTTACGACAGCCTGCTCACACCCTCCGACAGCCCCGATTTCGAGTCTGTGCAGGCGGGCCCGGAGCCAGAGCCGCCTCTGGGCTACACATCTCCCTTCCTGTCGGCCCGGCTGGCCCAGCAGCGGGAGGCCGAGCGGCACCCCCGCCTGGCGCCCGGTGGCCCGGCGCCCCGCGAGCCCTCGCCCGTCCGCTACGACAACCTGTCGCGCCACATCGTGGCCTCCCTGCAGGAACGTGAGAAGCTGCTGCGCCAGTCACCGCCGCCGGGCCGCGAGGAGGAGCCGGGCCTGGGGGACTCGGGCGTCCAGTGCACGCCCGGCTCGGGCCACGCGCCGCGCACCAGTTCCTCCTCTGACGACTCCAAGCGCTCACCCCTGGGCAAGACGCCACTGGCACGCCCAGTGGCCCCCCGGTTCGGCAAGCCGGATGGGCTGAGGGGCCGGGGACTCGCCTCCCCTGAACCAGGCCTGCCCGCCCCCTACCTGGGCCGCTCCGTGTCTTACAGCAGCCAGAAGGCCCCCCCTGGCGTCCCGGAGACGGAGGAAGTGGCCCTGCAGCCGTTACTGACGCCCAAAGATGAAGTACAGCTCAAGACCGCCTACAGCAAATCCAACGGACAGCCCAAGAGCATAGGCTCAGCCCCCCCCGGCCCGGGCCAGCCACCTCTCAGCAGCCCCACGAGGGGAGGCGTCAAGAAGGTGTCGGGGGTGGGGGGCACCACCTACGAGATCTCGGTGTGAGCCCGGCCCCCTCCTCTGCACCTGCACCAAAGGGCCCCTCCCCGGCACGGCCATGTGTGAACCGCCGATTCCGAGAGGAAGAGGGGCGTTTCATAAGATGCGGGGGCTGGGGGGTCAGAGCGTGGGGGCCCCGAGACTGGGGTGGCGACCCCCCTTCACCTTTCTAGACCCCCCCCCCCACCCCCTGGACCAGACTCAGTGGACATTTGTGCAATTGCTCGCCCTGGAGGGAACCAGATCATTTTTAAACCAGAAATAATTTTTTTTATTATTGTTACGGATTCTATTTTTTTCCTCTTCTGCGTTACCAGGTGTGTGTGTACATATATATATATATATATATATATTATAAATATCAAAGAAATTATATATCTATCCTGGGATGGGCAGATGAGGGAGGGAGGTGTGTGCGGGGCCCCTTACTCTTCCTGTTCCTCAGACCAGCCGGAAGAGGGGAGACGTCCTGAGGTCTTCCTCTTCCCCACGGCTCCCGCTCTTGGTCCCAGCTCCCGTCCAAGGACACAGCACCCTGTGCTGGTGCTCAGGAGAGACACCCAGGGAGAGGAGAGGCAGGGCAGGGTCTGTCAGAGGAGGAGGGCGCCTCAGCCCCTTGACTGGTGGCGGTGGTGGGGTGGTCAGAAGGGCTTGGCGGAGCTCCAGCAACAATACTGGGGTAGCCCCCCTTCTTGGGGGAGAGGGAGCAGAGCAGGCTTCTTTAGCGGGCCCCTCAAAGCCCTCCTCCCCCGTTCACATGGTTAACGTCATTTTTAAACCCAAGGCCGGGAAAGAAGAATCCAAAAAGCAATATTTCTCATCACATGCCAAAAACGGGATGGAGAGAAGGAGCGGCAGGCCTAGGCCCCTCCAGCTGTCCCTTGGGGGTCCCCCCTGCCCACCTCAGTATGGTGCTGGGTAGAGGGGATACCTGGGTTCTCACCTTCAAAAACAGGGGCGACCCCAGCCTCCAGACAGAGGCCCTTTTATTTTTTATTCTGATTAGCCATTTTAAACCAACAAGGAATAAAAAGAAATCCTGATCTAACCAG EMBV3_21451 AGAGTCTAAAGCAGCTCTTACACTACAAAATTAGTCAATAGAGTCCATTTGCCAGGTGGG Gene GeneID:508554|MRS2:NM_001101903:62_cdna Constitutive 2 NULL GeneID:508554 23 GENE MRS2 MGC166254 MRS2 magnesium homeostasis factor homolog (S. cerevisiae) EMBV3_24565 AGACTCTCTTTGTTGTGTGTCCTGAGTCCATCCATGTAGCGGTTGTTTCAGACCCTCTGC Gene GeneID:509575|AMICA1:NM_001080250:53_cdna Constitutive 0 NULL GeneID:509575 15 GENE AMICA1 NULL adhesion molecule, interacts with CXADR antigen 1 EMBV3_39659 TCTTGTTAATGAATCACTTCGCCATAACTCCGGTGCCAGAAAACTGGCCTGACTGGAGGG Gene GeneID:526006|ENO2:NM_001101125:52_cdna Constitutive 0 NULL GeneID:526006 5 GENE ENO2 NULL enolase 2 (gamma, neuronal) EMBV3_13755 GGTTCTCAGCCACCATTCTGCTTCAGCCCCTGGAAAGCTATTGAAGAACATCTTGGTAGC Gene BVT0102_077328 - 1 EMBV3_15481 GK000010.2:25882287-25920426 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34576 TGCTGAGGGTCATGCTCTGCTTTATGAAGTGTTGGGGATGGGGGTGCTGGGCTGAATAAA Gene GeneID:617215|PTPN18:NM_001078069:19_cdna Constitutive 2 NULL GeneID:617215 2 GENE PTPN18 MGC151912 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) EMBV3_00779 GTAACAGTGTGTGGAGACATACATGGACAGGGTGATTTTGTAGACCGAGGTTACTATAGT Variant GeneID:511058|PPP6C:NM_001130750:14_cdna 236^301 1 EMBV3_36479 GeneID:511058 11 GENE PPP6C NULL protein phosphatase 6, catalytic subunit EMBV3_20458 CCTGTTCTTGCGATTGAAAACCACATTCAGTAGACACGCATTTGAAGCCACGTGATGCCC Gene GeneID:515266|ATF3:NM_001046193:72_cdna Constitutive 0 NULL GeneID:515266 16 GENE ATF3 MGC137608 activating transcription factor 3 EMBV3_02267 TCCCCCAGGTCCTCACACTCGCCTGCACTGACATCTTTATCCTTGAGCTCCTGATGATTT Gene GeneID:788587|LOC788587:XM_002693811:54_cdna Constitutive 0 NULL GeneID:788587 15 GENE LOC788587 NULL similar to olfactory receptor Olfr1425 EMBV3_37418 TGGGAAGATCACTTATCGACAACCGGTGCTGGGCGCTGACTTTCTGCTTTGGGATACGTT Gene BVT0102_075490 + 1 EMBV3_19848 GK000013.2:46703757-46779270 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14439 TTCTGCGTCCACGTGAAGCACCCTCACAAGGAACTACATGAATGACAGCCTTCGCACAGA Variant GeneID:538796|CCNL2:XM_002694131:491_cdna 639^703 1 EMBV3_09823 GeneID:538796 16 GENE CCNL2 MGC128891 cyclin L2 EMBV3_16860 CTCTGCCTGCTTCCCTTTTCCTCAAGGGGTTCAAGGGGAGAATCCTGAACACTTACTCCA Gene GeneID:531564|SLC29A2:NM_001103269:51_cdna Constitutive 1 NULL GeneID:531564 29 GENE SLC29A2 MGC179613 solute carrier family 29 (nucleoside transporters), member 2 EMBV3_17015 ACTGCCTGCCGAGACCATCCACCAGATGGGAAACAAAATAGAAAAGCCCAACCCTGAGAA Gene GeneID:511744|PSTK:XM_002698558:68_cdna Constitutive 1 NULL GeneID:511744 26 GENE PSTK NULL phosphoseryl-tRNA kinase EMBV3_37834 GGTAGATTCGGGGAAGAAATAAAGGGGTGACTGATTATGCTTATAACTGAGTTCTCTCTA Gene BVT0102_111722 - 1 EMBV3_37133 GK000028.2:29703406-29750368 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02447 CAGCTTCTGCACCGTGATTCCCACTGGAGCCTTTGCAGTTTCTGGACATGAGCTCGGTCA Gene GeneID:509263|LOC509263:NM_001031755:85_cdna Constitutive 3 NULL GeneID:509263 16 GENE LOC509263 FLJ20584 hypothetical protein LOC509263 EMBV3_27264 GGTTGTATTGCACTAGGAAATCTCTCCCACTCCTCCCTTTTCTCTTTCTCTCCCTATACA Gene GeneID:540369|DYNLL2:NM_001113303:45_cdna Constitutive 1 NULL GeneID:540369 19 GENE DYNLL2 MGC127196 dynein light chain LC8-type 2 EMBV3_08588 CGTGCTCAGCGACCCGCGCAAGCGCGAGATCTTCCTCTCCCCAAAACACCCGAGAAACGC Variant GeneID:538426|DNAJB1:NM_001033763:34_cdna 225^939 2 EMBV3_00001 GeneID:538426 7 GENE DNAJB1 MGC129124 DnaJ (Hsp40) homolog, subfamily B, member 1 EMBV3_26039 CAGTGCGTGATGCTTGCTCTATCAATCTCATTAATTTAGATCCCCTAGTGTCTTCATGCG Gene GeneID:524608|DCBLD2:XM_002684705:27_cdna Constitutive 0 NULL GeneID:524608 1 GENE DCBLD2 NULL discoidin, CUB and LCCL domain containing 2 EMBV3_37714 GAGAACTCCCGGCTGGGCTGCCAGATCGTGCTGACATGGGCAACCGGACGGCCCCAGACA Variant GeneID:505159|FDX1L:NM_001080226:303_cdna 488^573 7 EMBV3_31252 GeneID:505159 7 GENE FDX1L MGC152067 ferredoxin 1-like EMBV3_25186 GTGCACAGAAGTAGGAGAAAAGATTGCACTTAGCCGAAGAGTTGAGAAACACTGGCGTTT Gene GeneID:512350|EIF2S3:NM_001046117:17_cdna Constitutive 0 NULL GeneID:512350 X GENE EIF2S3 MGC137622 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa EMBV3_24244 TTGAGCTCCAGACTCATGCTTCCAGAGGCCGAGTGAACTCACTCTCAATCTGTTGCAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33904 GCTATCCGAGGCCAACCGAGGATTCCGAGGCCAACCGAGGATTCCGCGGCGCTGCCGTAT Gene GeneID:100336838|LOC100336838:XR_083939:135_cdna Constitutive 0 NULL GeneID:100336838 18 PSEUDO LOC100336838 NULL zinc finger protein 160-like EMBV3_00982 CAGGTGCTGCTGTTCCTGGTCTTTGCTGCCTTCCTGCTCTTTGTTTACTACTTCATGCAG Gene GeneID:399681|EMD:NM_203361:31_cdna Constitutive 3 NULL GeneID:399681 X GENE EMD MGC128971 emerin EMBV3_10478 CTACTACCTGACTTTTCTGGGTTGAAAAGATCCAGAGGGTTTCTGTGCTCTGTGGACACC Gene BVT0102_362903 + 0 NULL GK000028.2:31024893-31044235 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15113 TGGTTTTACACTTGGTCCCTTTTCCACCTTCCCCCAGTTCCTGAAGTAGTTAACTATCTG Gene GeneID:526343|UTP15:NM_001101128:124_cdna Constitutive 2 NULL GeneID:526343 20 GENE UTP15 NULL UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) EMBV3_18355 CCTCAAGAGGAGATTGTTGCTGTGATCCTGGGAATCATCTGTTTTGTCTTGACGTATACT Gene GeneID:100036590|NKG2C:NM_001098163:2_cdna Constitutive 0 NULL GeneID:100036590 5 GENE NKG2C NULL NKG2C protein EMBV3_14111 GCAGCACAATCCGGAACCCTCGAAGAAGCTGAGCCAGAGCTGGAAGCCGAGACCTCTGAA Gene GeneID:515777|NOL3:NM_001083688:252_cdna Constitutive 0 NULL GeneID:515777 18 GENE NOL3 MGC148910 nucleolar protein 3 (apoptosis repressor with CARD domain) EMBV3_02968 CAGCTTCTGCAGCGTGATTCCCAGTGGAGCCTTTGGAGTTTCTGGACTTGAGCTCGGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01469 CTTTGCAGCTTCAGCCGAGCAGCTATGCAAATGCGTTTTTCATTAGGAGCATGGGGCCAG Gene BVT0102_380007 + 0 NULL GK000025.2:25588668-25599907 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05581 CCCTGGAGCTGGGATGACATTGAGTTTGAGCTGCTGACGTGGGATGAGGAAGGAGATTTT Gene GeneID:512562|MAGED1:NM_001046125:5_cdna Constitutive 0 NULL GeneID:512562 X GENE MAGED1 MGC128691 melanoma antigen family D, 1 EMBV3_27925 GATACACGTTTCTCCAGCGGTGATGCTGTTGCTCAGTTTGCTAGAGGTCTTTCGGGAAAC Gene GeneID:534309|C8H9orf30:NM_001076019:78_cdna Constitutive 0 NULL GeneID:534309 15 GENE C8H9orf30 C9orf30 MGC139813 chromosome 9 open reading frame 30 ortholog EMBV3_29298 TTTTCAATGTTCACCTCGGTGTTTGCTTCTCTGCCAGTCTGTGTGGCTACGGGGAAAGGG Gene BVT0102_058798 - 0 NULL GK000011.2:100248794-100288806 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029147 TCONS_00029148 TCONS_00029150 TCONS_00029145 TCONS_00029146 TCONS_00029149 1 XLOC_015677 Coding TCONS_00029149 XLOC_015677 Coding Coding FNBP1 11:100286391-100374775 j TSS20329 4760 1 TCONS_00029149_4 533 15 0.946313205028116 1.56531401239196e-10 2.45606840986781e-13 1.44223727165718e-51 1.46357453119369e-10 1.49264575142081e-11 1.0216744733436e-11 5.66448839641016e-11 1.93654162462617e-19 4.38559883513779e-13 0.000109466344676076 1.38462439578667e-05 0.000161718251829749 7.08431295762883e-11 7.8352848710048e-11 2.74570487194269e-08 0.00269423565440429 0.000698480049401652 0.000662030078884066 1.86142824061588e-11 8.10113866173667e-55 1.05907687484306e-11 0.00145409028052113 6.62683950231754e-13 0.00086404176853236 2.36855088633979e-11 3.82644849228643e-11 4.84159096559926e-27 3.17183389901667e-05 0.000406629590099446 0.000339901461194863 NM_001206712.1 FNBP1 Bos taurus formin binding protein 1 (FNBP1), mRNA. 0.0 8549 99.69 0.99936974789916 XM_005251824.1 FNBP1 PREDICTED: Homo sapiens formin binding protein 1 (FNBP1), 0.0 2493 89.27 0.398739495798319 TCONS_00029149_4 sp|Q96RU3|FNBP1_HUMAN FNBP1_HUMAN Formin-binding protein 1; 0.0 999 94.04 0.99624765478424 4 coding 1 1 1 1 0.0189011116023817 0.901829084371754 -0.00331996578086892 0.964270292393084 CAGGATCAATTTGACAACTTAGAAAAACACACACAGTGGGGAATTGATATTCTTGAGAAATACATCAAATTTGTAAAGGAGAGGACAGAGATTGAACTCAGCTATGCAAAGCAACTCAGGAACCTTTCAAAGAAATACCAACCTAAAAAGAACTCGAAGGAGGAAGAAGAATACAGGTATACGGCTTGCCAAGCCTTCCTTGCCACCCTGAATGAAATGAACGATTATGCTGGGCAGCATGAACTCATCTCCGAGAATATGACCTCTCAGATCATTGTGGAGTTAGTGCGCTACGTCCAGGAACTGAAGCAGGAGAGGAAATCGCACTTTCACGATGGACGGAAGGCACAGCAACACATAGAGATGTGCTGGAAGCAACTAGAATCAAGTAAAAGACGTTTTGAGCGGGATTGCAAAGAGGCTGACCGAGCCCAGCAGTACTTTGAGAAAATGGATGCTGACATAAATGTTACGAAAGCAGATGTTGAAAAGGCACGACAGCAAGCTCAAACGCGTCATCAAATGGCAGAGGACAGCAAAACAGATTACTCATCAATTCTACAGAAATTCAACCACGAGCAGCATGAATATTACCACACTCACGTTCCCAATATCTTTCAGAAAATACAAGAGATGGAGGAGAGGAGGATAGTAAGAATTGGAGAATCAGTGAAGACATACGCAGAGCTGGACCGGCAGGTGATTCCCATCATTGGGAAATGCTTGGATGGAATCGTAAAGGCAGCCGAGTCAATTGATCCGAAAAATGATTCACAGCTGGTCGTAGAAGCTTATAAGTCTGGGTTCGAGCCTCCAGGAGACATTGAATTTGAGGATTACACTCAGCCTATGAAACGCACTGTGTCAGATAACAGCCTTTCAAATTCCAGAGGAGAAGGCAAATCAGAGCTCAAATTTGGTGGCAAATCCAAAGGAAAGTTATGGCCATTCATCAAAAAAAATAAGCTTATGTCCCTTTTAACATCCCCCCATCAGCCTCCCCCACCTCCCCCTGCCTCTGCCTCACCCTCTGCTGTTCCCAACGGCCCCCAGTCTCCCAAGCAGCAAAAGGAACCCCTCTCCCATCGCTTCAACGAGTTCATGACCTCCAAACCCAAAATCCACTGCTTCAGGAGTCTAAAGCGTGGGGGCGCGACACCAGAAGATTTCAGCAACCTCCCACCCGAACAGAGAAGGAAAAAGCTCCAGCAGAAAGTCGATGAATTAAATAAAGAAATCCAAAAGGAAATGGATCAAAGAGACGCCATCACAAAAATGAAAGATGTCTACCTAAAGAATCCGCAAATGGGAGACCCCACCAGTTTGGATCACAAATTAGCGGAAGTCAGCCAAAATATAGACAAACTGAGACTAGAGACCCAGAAATTCGAGGCCTGGCTGGCCGAGGTGGAAGGCCGACTCCCAGCCCGCAGCGACCAGGCCCGTCGGCAGAGTGGGATGTACGAGGCGCAGAACGCCCCCTCCGTCAACAACTGCGCGCAGGATCGGGAGAGCCCCGATGGCAGTTACACAGAGGAGCAGAGTCAGGAGAGTGAGGTCAAGGTGCTGGCCACAGACTTTGATGACGAGTTTGACGACGAGGAGCCTCTTCCTGCCATAGGGACATGTAAAGCCCTCTACACGTTTGAAGGTCAGAATGAGGGAACCATTTCAGTAGTTGAAGGAGAGACGCTGTACGTAATAGAGGAAGACAAGGGCGACGGGTGGACCCGAATTCGGAGAAATGAAGATGAAGAGGGTTATGTTCCCACTTCCTACGTCGAAGTCTATTTGGACAAAAATGCCAAAGATTGCTAAAGGTGGTTCCGGGAGCCAGAGCCTCGGGGAGCCTTCCCAGGAGAAACCCTTCGGTCTGCTTGTCTCCACAGGCCTGAGCGCCCGCGAACGCCCTGGGCCTGGGTTGCTGTGTGGCCCTGGGCCCCTCAGCCTGAAGTTGACATCCATCCCCACCTGCAGCTGCTCGCTTTCTTCTTTTCTTTCCTTTTTGCAGCATGTTCCTCAGAGCCCGGCTCCGCCCCTGGCCCAGTCTGGCCGCCTCTTGGCAGGGGGAGGGCGTCCCTGCCCCGCGACCTCGGTCCACCTGGCGCAACCCGGCCCGTCCACGATTCACACTGTGCCTTTCCGTGAAAACTTTGCCACTGGTCTCCGGGCGAGACAACCGAATCTGGGCGAGGAGGGTCAGGCCTGCGCCTGGTGGACTGGGTGCCCAAAAGTCACTGATGTGTCCCTTACGTTAGAAAATACTCATCTTTTCCCAAGTCCATTGGGTATTCGGTGGTCCTTTCCTGACTATGGACCCTCACCAGGTACTAAACGATCAGCCCTTGAAATGTTTCACGGCCTGAGTGTCCATGGTGGACACACACACACACGTTTTTGTTTGAGGTCTTGTCTTCAGTGGCCTAGAAAAGTCCACACCAGAAGTCAAATTCCAGCTCTTAGGCCAGTCCCGCTGTCTTGCCTGTGTCCCCTCCCTTTTCATGGGGTCAAGGAACATCCCAGCCCACCTTCTCCCCGTTGGCCACCCATTGATAAGGACCGCGGGTTGTGAATGAGCGTCTTGCCTCTGCATTAGCTCATTGGCCAAAGGAAGACTCTCCCCTTTCTGTGAATTCCAAAGTCCGCGCCTTAGGACTCCAGTGCTGTCATCACCAAAGCCCCTGTGCTTCTCGTGGTCCGCCAAGTGATCCTGTGGCTGCAGCTTCCACATTTCAGTGTGTGCTCTCCAGGCCACGCAGAGTTAATCGTGTTTTGAGCTGAATCTCCTTCCTCTCATGGATCTTTGAGGAAGACATGAGGTCCCGTACCCAGTGGGCCGCTCACGCCTTAGAGCAGCGTAGCTTCTCTACTTACCTGGTGCAGAAACAGTCAAGAGAAATCTTGGACTGTGGGTTTCTGTGAACAAAGATCCCGTCAGAAGCCCCAGGGTGCCATCAGGCATCTTTCCTGTTGTTTGGCTTTTGGTGACTAGATGGTCACCTTGAGCCTCCTTGCTGCTTTGCCACACTTGCGAATCTAAGACAAGGAAATCTGGCAGGAGCTGAAGGGACCGGTACAGACAGGACGGGTCCCGAGGGTTAGGCCTTGGTTCAGGGGTAGGAAAATTGTTCCTCTCAGCAAACCAGGGTTGACCACACACCAGCCTCAAAGCTGCTCAGTCAACCTTTGGTGACAGGAAACCACGAGGGAACAAACGCCAAGTGTGAGCAGGGGAAGAGGAAGTGGCTTCAGGTTGGAGCAGGCATTGGGCCCCTCTCACTCCTTCCGCCCCAGAGTGAGCCTCTGCAGCTGTGAGCGTCTGGGACCCCTCTGTTAACCCAGGGGGCAGCCCCATTGTCCCAGGCTCCTCAGTCTCACAAGACTGTCTTGGCAGATGACGGCAAAGCCAGGATGCCAAAGGACAGGAAGAGTCTGGGCTCCACCCGCGTCCCTGCAAACCAGCAGGCGCGTGGTTGCTCCGTGCAGCCCCAGCAACCCCACATAGGGTTTGTCCATCAGGCGTCTCCAGGAATTCTGAATTTCACCAAGTCAAGCTGCCCGCTCTCCACAAGGATGCTAATTTTTTTTTTTTTTTTTTTAAGAAAAAAAAAATTAGATTCTAGAGCCTCGGGAATGCATGTGCATTGCATCTTTCATATTAGGGGTCAGGGTAGATGAACTCCTTCCGAATTAGGGGGAAAGGTATAAGCTGCAGGATTTGTTCTTTTAAACGTCTGTTTAACCTGACATGGGCTATGCTTGTGTCCTCTTGTGTCCCCTCTGCCTTTCTTTTTCTCTGTACCACCTGCGTCCAAAAAAGAACGAAGAAGTGCTTTTCAATGTTCACCTCGGTGTTTGCTTCTCTGCCAGTCTGTGTGGCTACGGGGAAAGGGGAGTGCTGTACCAGCTGGGGCTTAGTCAAGAAAATAAGTTATTATAGGCTAGTTGAGACTTATCATTTACTCTGGGAATCCTACTGTGAAGTCGTCTATATATTATTATGAGCAGTTCACATAGAGTAGAAACGTGGACTCTGCCATGTGCTTTCTCAGCCTTCCCTCATATCCACTGACCATCATTTCTCCACCGACGCTAGAATATTGTTACGCCGTAAGAATGACTCATTGTTAAAGAACGTACTCTGAAAATAACTTAAAAACAGAAAGTGAGGAACTTGTCGTTTACCCAATTTTTCCTTTGCAGAATAGGAAAGAATAAAAAGGCATGGTAAGCTGGGATGGGATTTTCCTTTGGGCTTTTATCATGAACACCCTGAAGCTTTGGGGTTCGAGGAGTCTGTCTCTCCAGCGGTTAGTGCAGAGGCCTCAGTCCCTTTTGGTAACATCTGTAATTGCTGGGGAAAAGTTTACTGAACATGAAAAGGTTATGTGGATGCTAAGTATTTTTCCAGAGAAGTCAAATTTCATACTTCCTAATGGCTCTGCCTCCTGTGCTTATATCATCAAAAGAAAAAAAAAAAAAAAAAACTTTAAAAAGTGATCCAGAATTCTATTTTAACCTGGTGTCCAGCACCTTTAAACTTCTTGGTTTATCAGTGTGTGTTGCACTAATTCTAAACTTCGGAGGCGTTTCAGTGTTGTAACGGCCCACTGCCATTGTAAAGGTTCTGGAATTGCCCATTTGTCTCTAGAGATGGAATTAAACCAAATAAAGTGCTTCCATTGGAAGGCTCATATCGACCTTGTAACTATATGTTAATCCTCTAAATGTTAAATAAAAGTGTAACTTCTGGCACAGTA EMBV3_01329 GGTCCCATAAGAAAATAGAAGAAGGATATGAACAAGCAGTTTACAAAAGAGGAAATCAGG Gene BVV0102_308884 + 0 NULL GK000008.2:31280550-31463962 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25620 ATGGACAGAGGAGTCTGGTGGCTGCAGTCCATGGGGTTGCGAAGAGTCGGATACGACTGA Gene GeneID:509946|TM9SF2:NM_001077895:24_cdna Constitutive 0 NULL GeneID:509946 X GENE TM9SF2 MGC152009 transmembrane 9 superfamily member 2 EMBV3_07285 CCATCCTCTTCATGTATGCAAAGCCCAAGGCTAAAGATTCCTCTGGTGCAGACAAAGTCC Gene GeneID:789766|LOC789766:XM_002689882:21_cdna Constitutive 0 NULL GeneID:789766 8 GENE LOC789766 NULL similar to olfactory receptor MOR262-6 EMBV3_36429 CATGTGGAGAAAGAGGAATCCAGGCAGAGGGAAAAGTAAATACAGAGGCCCTGAGGTGAG Gene GeneID:538467|C26H10ORF2:NM_001098463:198_cdna Constitutive 0 NULL GeneID:538467 26 GENE C26H10ORF2 NULL chromosome 10 open reading frame 2 ortholog EMBV3_05474 GAAGAAAAGTTTAGCATTGAGCACCTTTACCTTCATGGATAAGCTTCAGCTTGCTCTTGC Gene GeneID:517211|NAA50:NM_001075750:83_cdna UTR3_Alt 2 NULL GeneID:517211 1 GENE NAA50 MGC140022 NAT13 N(alpha)-acetyltransferase 50, NatE catalytic subunit EMBV3_26397 GTCCATGAATTTTGCCGATACGGAGCTGCTGAACCACACACCATTGCTGCATTCTTAGGG Gene GeneID:614491|NAE1:XM_002694804:648_cdna Constitutive 0 NULL GeneID:614491 18 GENE NAE1 NULL NEDD8 activating enzyme E1 subunit 1 EMBV3_02659 AGACGAACAGCCGGTACTATATCTGCAACAGGCTGTTGTAGTTGAACTCCAGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_32941 GAACATCAGGACCATGAGCCTGTTTTCCATGGCAGTGACTCCAGAGGTTATCAAAGTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25193 CACAGTTTTGGTGGTGCTGTGGGTGGAATGGTGTGTGGCTGAACAGAGATCGGAGGATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15936 AACAAGCCTGGGAACAAGAAACTAAATTAGACTAAAAGAGATTTCTGATATTGCCAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35654 AGACCTGTCTACACTCCAGCTATGCAGACAAGGCTGTTACATTCCGGCTTCCTGGACAGC Gene BVV0101_091140 + 0 NULL GK000003.2:93725242-93728449 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14471 TCACCCTGCAAAAGCTGACACATACAGAGGAGGAGACATCAAAAGAGATCCCAGGCAAGC Gene GeneID:786510|LOC786510:XR_084135:49_cdna Constitutive 0 NULL GeneID:786510 X PSEUDO LOC786510 NULL similar to zinc finger, CCHC domain containing 12 EMBV3_40896 CTGCTCCATTCCTCAGTCTGAACAGTTCAGGTACAGTCAGACTCAGGACAGGGGGTTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11321 TTCTCCCTGGAGCAGAGAACTGTGAGGGTGAAGCAGAGAGACAAGAAAGTGGTGACAAAG Gene GeneID:785181|LOC785181:XR_083870:75_cdna Constitutive 0 NULL GeneID:785181 15 PSEUDO LOC785181 NULL similar to Uncharacterized protein C4orf27 homolog EMBV3_37245 CATTCCACAACTACCACATGGGCATTACAGGTCTTACTGAAGTTAAAACAGATGAGTTTC Variant GeneID:512044|ACAT2:NM_001075549:14_cdna 511^654 1 EMBV3_32641 GeneID:512044 9 GENE ACAT2 MGC140551 acetyl-Coenzyme A acetyltransferase 2 EMBV3_34538 TGTGGAGCACAGGCTCTAGGTTAACGTGTGTTTCTGTAGTTGTGGCACTTGGGCTCAGAG Gene BVT0101_070676 + 1 EMBV3_14951 GK000003.2:68986405-69195015 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178210 1 XLOC_107983 NonCoding TCONS_00178210 XLOC_107983 NonCoding NonCoding - 3:69132879-69133737 - TSS132969 858 1 TCONS_00178210_1 88 0.29020979020979 1 0 0.00137959725478685 0.000199094856352599 0.0018227579532655 0.000551673874778566 0.00261532698505948 0.00081366173489504 0.000210702582507685 0.000275744685511925 0.000128743379697832 0 0 0 0 0 0 0 0 0 0.00119515447161393 0.000553187329431516 0.000247669825726697 0 0 0 3.23006240745359e-05 2.46344833158317e-05 0.000587281011724782 0 0 0 XR_138726.2 LOC100847934 PREDICTED: Bos taurus uncharacterized LOC100847934 (LOC100847934), 1e-29 134 74.88 0.243589743589744 0 noncoding GGGAAAGTGGACGGCATCTAACAGTGCTCATGGTCTGCCTACTGCCCTTTGTAAGAACCATTGCTTCTGATGGGCGTTTTCATTGTTTCTATTAGACTAAAATGTTTTCTTCTATGACTGCGATGCAGTGGTTACTAGGCAGTTAGAGAAAGTAAGTTGCGTGGCAAGACTCCTGAAGGAATGCGGGTTCTAAGGGCTGCCCAGGTGACAACAGTGCACCCTCACACAGGGTCCCTTCCTTTTTCTGTCCCCTCACATCCTGTGACTGTTGCTGCTCTTGCAGCCTCTTCATTATATTATACCTTTCTCCCAGTGTCCGTTACAGGAAGGCAAGTTCCTCATGGGTCAGGATCGTGTTTTACTCATGAGTCTTTTAGCAGCCCAAACACAAATGGCTATTGGTTGTACATTTCCTCGTATGCTTTCAGTTGCCTCTTTGGAAGATAATTTCTTCCTTTCAATTATTTACACCTTGAATGGAGGAAAATTTTGAATAAGCTGGGCTCATTTAAAGTAAGGAACATAGATTGCCTGAGAGGGGAGTGGAAGGCATTCTAAGCGGAGACAACAGCATTGATACACTGCACAGAAACAGGATAAAGGGCTTCACTGGTGGTTCAGCGGTAAAAACACAGATTCAGTCCTTGATCCGGGAAGATCCCACATGCCGTGGAGCAATTAAGCCTGTGCGCCACAGCTACTGAGCCTGTGCTCTAGAGCCCAGGAACTACAGCCTCTGAGCCCAAGTGCCACAACTACAGAAACACATGTTAACCTAGAGCCTGTGCTCCACAGCAAGAGAAGACCGTGCAAGGGATACCCGCGCCCTGCAACTAGAGAAATGCCCGTGCAGCGAAG TCONS_00170209 . 5' 61279 TCONS_00170209 . 5' 61279 EMBV3_21188 CTCGAAGGTGTGAGCCTGGTTCTCTGCACATCAGGGCATTACTTGAAATTGCCAAGCTTC Gene BVT0102_094721 + 0 NULL GK000001.2:60364336-60843661 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00007953 1 XLOC_003513 NonCoding TCONS_00007953 XLOC_003513 NonCoding NonCoding - 1:60491592-60492401 - TSS5030 809 1 TCONS_00007953_1 60 1 0 0 0 1.14388162227401e-05 0 0 0 0 0 0.00121911864746571 0 0 0 0 0 1.01075139722798e-06 0 0 0 0 3.55572009656231e-05 0.00046155095953426 0 0 0 0 0 1.44849265508583e-05 0 0 0 0 noncoding 0 0 0 0 GGGCCCACATGAGCCCTGGAACCTGACCTCTTTCCTGCAGAGACCGAAGGGGCAGGTAGCTATGGGCTAGCTGTACTGAAGCACCTCTGAGAAAGGCCTTTATTCTCGAAGGTGTGAGCCTGGTTCTCTGCACATCAGGGCATTACTTGAAATTGCCAAGCTTCGTTTTCCTCCGTGTACTCTGGCCTACCCAGAAGAACAAAGGCTCCAGGCTGACACTTCCAGAGGAGGGACATAATGGAGTCAAGTGGTTGAAAATGGCACATATAGCAATGTCTGTGGTCTGCTGAAGATGCCATTCACTTTGACTTTGTGCTATCCTTTACCTATAGAAGCTAGATGCACATGGCCCAACCTAAAGCCTGTGATAAGAGAAGAAACATGGGCATTGGATGGAAATTTCCAGAATCCACTGCTATTGGTATCTAGTTGCAGTTTCCAGAGTCCAGCGGAACTGAGAGTCCAGATGCTGTAGTGGTTAGCTTATCAGCTGATACGTTAATTCTGGCTCTGCAGATTCCTGTCTCTCTGCTCCATAGCAAGTTTCTGAATCTGGAAAATGGGACTGCTGTCACCACTTCATAAGGTGGTGATTATGAGTAACAATGATTAATCAGTAAATTATTTTTATTGTCCTCTTTCATCAAATGTGATGTGAATTTTAATTCTGTAATGGCTCCTCTCCCTCGCTCTTTTTTTTTTTGTAAGCAACTTTTTTCCATTAAGTCCCTCAGGAATCCTGCTTGCATTTGCCTTTTGTCCTTGCTTCTGTTTGCACTGGTCTAACTTTTACCTGCGTTGTTTGGCTG TCONS_00003450 TCONS_00003451 . 5' 222385 TCONS_00003450 TCONS_00003451 . 5' 222385 EMBV3_35000 ACAGCTGGTAAGTGGCAGAGCTAGGATATGAACCCAGGAAGTTTGGCTCCAGCACCTGTT Gene BVV0101_023488 + 1 EMBV3_11758 GK000030.2:92320416-92323925 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37145 GTACCTTGCTCTGCCTGGAGCCATGGACGGATTTAGGAGCCACTGCACAGTACATTTTCT Gene GeneID:504593|SPRY4:NM_001081512:7_cdna Constitutive 0 NULL GeneID:504593 7 GENE SPRY4 MGC154989 sprouty homolog 4 (Drosophila) EMBV3_14004 CCTTCAAAACTGCCTCTCCCTAGCCCTGCCGCCAACAGTTCTACGTATTTATTTCTTGAC Gene GeneID:509587|ATG16L1:XM_002686559:50_cdna Constitutive 3 NULL GeneID:509587 3 GENE ATG16L1 NULL ATG16 autophagy related 16-like 1 (S. cerevisiae) EMBV3_08330 TGAGGTGAAGGAAGTCAACCCCACCACTCATTGCTATGCCCTTGTCAGCAAATTTCAGCG Gene GeneID:520262|LOC520262:XM_002700275:11_cdna Constitutive 0 NULL GeneID:520262 X GENE LOC520262 NULL similar to melanoma antigen MAGE EMBV3_31806 AGAATGCCTTGCAGAGGACTGTCTGTCCTTGCCTGTGGAGGGAGAAAACAAGCTTTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14987 TGGAGACCATACTGCATCTTATCCGTACTCTCCCTGCAGGATTACACCAGCAGTCCAGAA Gene GeneID:338045|SQSTM1:NM_176641:10_cdna Constitutive 0 NULL GeneID:338045 7 GENE SQSTM1 MGC127197 sequestosome 1 EMBV3_23977 CGACGAGGCTCTGGGGCCACAGCTCTATGTAGAATCATCTTCGTGGGCCCTGATGTTAGA Gene GeneID:785034|LOC785034:XM_002692289:1656_cdna Constitutive 0 NULL GeneID:785034 13 GENE LOC785034 NULL similar to chromosome 20 open reading frame 112 EMBV3_25384 TCAGAGTGCTGTGAGCAGCCTACTGGACCACAGGGCAAGAGAGGCCCTGGATCCTGAGAA Gene GeneID:100337323|LOC100337323:XM_002698787:146_cdna Constitutive 0 NULL GeneID:100337323 28 GENE LOC100337323 NULL amyloid beta A4 precursor protein-binding family A member 2-like EMBV3_07034 ACATTCTGAACTGGGCCTGCTTTACAAGTTGGAGCTAGACTGTCCCTTGGAGGCCTGTAT Gene GeneID:506049|ZCCHC9:NM_001101055:2_cdna Constitutive 1 NULL GeneID:506049 7 GENE ZCCHC9 NULL zinc finger, CCHC domain containing 9 EMBV3_40931 TCCTTGCCATCCATCACCGCCATCCTCATCCTCATGTTTACCTGCCTCTTCCTGTTCTCT Gene GeneID:523556|CATSPER1:XM_002699392:397_cdna Constitutive 0 NULL GeneID:523556 29 GENE CATSPER1 NULL cation channel, sperm associated 1 EMBV3_31338 GCAATTTTGTCATCACCCTTATGAATATAAAGTGTTGCATTGAATTTCTTTTATGTTAGG Gene GeneID:535887|PANK1:XM_002698345:54_cdna Constitutive 3 NULL GeneID:535887 26 GENE PANK1 NULL pantothenate kinase 1 EMBV3_08322 CGGACGTGAGAGTTGAGTGAAAAATTGCCTTCTTTTTATTCTGCCTGTCTGCTTGCTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01172 ACAAGCACCCCGAGGTCTCCTTCAGCATGGAACAGGCAGGCGTGTAGCAAAAGATGGAAA Gene GeneID:506539|SIK3:XM_002693024:269_cdna UTR3_Alt 2 NULL GeneID:506539 15 GENE SIK3 NULL SIK family kinase 3 EMBV3_25861 ACCATCAACGGCATCGTCTACCCTGTGCCCCCTGACTACTACATCCAGAGGTTTTCTGAA Gene GeneID:337902|PAG8:NM_176619:19_cdna Constitutive 0 NULL GeneID:337902 29 GENE PAG8 NULL pregnancy-associated glycoprotein 8 EMBV3_11679 TGGAGACATTGGCTGGTGTCAGATATCAAGGCTCTTGGAAAATGGACAAATTTCTGAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13639 CCTGGGGATGACAAAGGGGTCTCCACAAGTCCTTCTCCTCTTGAGGGCCCTAATAATAAA Gene GeneID:789631|FIZ1:NM_001101308:205_cdna Constitutive 2 NULL GeneID:789631 18 GENE FIZ1 NULL FLT3-interacting zinc finger 1 EMBV3_19618 TTCAGAAGTGGAGGATTGATTAAAGTGCCTGGCATCCTGAGTAGGGTATATGCCATGTGC Gene GeneID:100337484|LOC100337484:XM_002692008:136_cdna UTR3_Alt 2 NULL GeneID:100337484 12 GENE LOC100337484 NULL tumor necrosis factor (ligand) superfamily, member 13b-like EMBV3_11276 TGCAGAACTCAGATTGCACAGAGCTAGACTCGGGCAACGCAAGCTGTGAGCTCAGTGACA Gene GeneID:614217|C9orf89:NM_001034753:108_cdna Constitutive 1 NULL GeneID:614217 8 GENE C9orf89 NULL chromosome 9 open reading frame 89 EMBV3_18512 CAGCTGATGTCTGGTTCATATGCGATGGGTTTTGCTGGAGCCATAGTCCACACAGGATCT Gene GeneID:782191|LOC782191:XM_002699141:103_cdna Constitutive 0 NULL GeneID:782191 29 GENE LOC782191 NULL similar to olfactory receptor 143 EMBV3_39062 AAATTGGGGTGTCTGGAGCCTGTAAATCTAAATGCTGGCTCGAATTTGTTTCCCAGCTAC Gene GeneID:516584|HIAT1:NM_001102038:113_cdna UTR3_Alt 2 NULL GeneID:516584 3 GENE HIAT1 MGC139615 hippocampus abundant transcript 1 EMBV3_10534 AAGTTCTCAGTATCCCGTTCTCTCTGCCGCTGCACTCTCTCGGCGGCTCAATAGCACACA Gene BVV0102_413276 - 1 EMBV3_30228 GK000011.2:1943564-1953346 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023709 1 XLOC_014342 Coding TCONS_00023709 XLOC_014342 Coding Coding ZNF2 11:1948581-1959336 j TSS17576 2823 1 TCONS_00023709_2 425 0.133545873184555 5 0.737957969127766 0.000736541812396942 0.000425651280888796 0.000178824823980379 0.000613205627166611 0.000404332865775498 0.000697312124496571 0.000716616487494697 0.000135793573115288 0.000830954929865166 1.10679914220188e-13 1.27690479450558e-11 6.81846893089646e-23 1.43300234019508e-11 2.2869100039691e-05 2.33155078709794e-11 1.32686128900606e-11 0 1.34253707998128e-10 0.00129323628944253 0.000315653880604189 0.000425763958455288 3.93596606090835e-11 5.00562772543663e-11 8.43433335767337e-11 0.00147714043940566 0.000475536927673212 0.000156516936137707 6.24475494213715e-11 1.56094403200581e-08 2.97720181865989e-11 NM_001046446.2 ZNF2 Bos taurus zinc finger protein 2 (ZNF2), mRNA. 0.0 3916 99.82 0.772228126106978 NM_021088.3 ZNF2 Homo sapiens zinc finger protein 2 (ZNF2), transcript variant 1, 0.0 2161 77.61 0.975912150194828 TCONS_00023709_2 sp|Q29RZ4|ZNF2_BOVIN ZNF2_BOVIN Zinc finger protein 2; 0.0 875 99.76 0.997647058823529 9 coding 0 0 0 0 -0.00691660913384087 0.963000182344021 0.0233128677595563 0.644824954643503 GGTGTGTGCTATTGAGCCGCCGAGAGAGTGCAGCGGCAGAGAGAACGGGATACTGAGAACTTGGGAAAGGACTCGGCTCTTCTCTGCAAGGAGAGCACCCTGGAGGGAATGGCTGCTGTGTCTCCAACCAGATGCCAGGACCCAGTGACATTCGAGGATGTGGCCGTAGTTTTCACAGATGAAGAGTGGAGGCGTCTGGTCCCTACTCAGAGGGACCTCTACAAGGAGGTGATGCTGGAGAACTACAAGAGCATCGTCTCATTGGGACTTCCAGTACCCGGACCTGATGTGATTTTTCAGTTGAAGAGAGGGGACGAGCCTTGGCTAGTGGAGTTTCATGGATTTGAGGGGAAAGAAGGTGCAGAGAATGTCTCTCTAGATTGGGAGACTAAGCCTGAGATTCAAGGTGCTTCAGAAGAAGAAAAATCAGAAGGATCATTGAAGGAAAATCTTGGAAGAAAAGGTCCTCCATCTCCTAAAGTTGAAGTTTATGTACTGGATGGCAGGTTGGGAACAGAGAAGGAAAGCCTTACAGTTGAGGCCTGCAAGAAACCCCCTTCTCTGGAGGAAAGCTTGCGGCACAGGGCAACGCCTCCCAAGAAATTTCTCACTAAAGAGAGAGACCAGGAATGCAGTAACTGTGGGAAGACCTTTTTTGACCACTCCTCCCTCATCCGTCATCAGAGAACTCACACTGGTGAGAAGCCCTATGACTGTCCCGAATGTGGGAAAGCCTTCAGCCACAGGAGCAGTCTCAGCAGACACCTGATGTCACACACAGGAGAGAGCCCCTATGAGTGCAACGCCTGTGGGAAAGCTTTCTTCGACCGTTCGTCTCTGACTGTACATCAGCGAATTCATACTGGAGAGAAACCCTTCAAGTGCAGCGAGTGTGGAAAAGCCTTCTTTGACCGCTCGTCCCTTACCCGCCACCAGAGAATCCATACTGGAGAAAGTCCTTATGAATGTAACCAGTGCGGGAAAGCCTTTAGCCAGAAAAGTATTCTTACGCGACACCAGCTAATCCACACAGGCCGGAAGCCATATGAATGTAATGAGTGTGGGAAAGCCTTCTATGGGGTCTCGTCACTGAACAGACATCAGAAAGCCCATGCTGGAGAACCTCGCTACCAGTGCAGCGAGTGTGGGAAGGCTTTCTTTGACCGCTCCTCCCTGACTCAGCACCAGAAGATTCACACTGGAGACAAGCCATACGAATGCAGCGAATGTGGGAAAGCCTTCAGCCAGAGGTGCCGGCTCACACGACACCAGAGAGTTCACACAGGAGAGAAGCCGTTTGAATGCAGCGTGTGTGGCAAAGTCTTCAGTTCTAAATCATCAGTTATTCAGCATCAACGGCGTTACGCCAAACAGGGAATAGACTGAGTTGGGTGAAAGCTTTAGTCCAAGGATCTCCACGAAAACTCAAGATAGGTCTTCCCCCTCTTAAATCCATCACCTGGTCATCACACCTATGCTGGCTACCCCTCTCCTTTTTCTGCCTCTCTGCACCCACAGTGTTTGAAGAAACACTGTCCACCCACTGTGTTACAGAGCTGATGTGGGATGCCAGAAATTAGGATGTGACTTTAAAGAGTCAGCATTCTGAAGACATTTGTCAGACACTAGGGACAAAGGTTAGGAGGCAGTCCTCAGACAAACCTCTTGTCCGAAGCCCCAGGCATCACTGCACTTTATATAACTGGAGGCCACAGCTGGACAGGAAAAGCACCCTTTATGTCAGGGCAGCACTGTTGTTTCCAGAAGTTCTTTTTTTATAGCCGTTAGTCCCTCTCTCTTGGAGGACTTTGTGCACTGACCTTGTCCTGTTGTGTCCCAGCATCTAGATCTCTTAATACCACTACTAGTAGCCAGCACTTATTGAGCGCTTATTATGGATTAAGCACTCAGCTGAGAGTTTTGCAAGAAGGAAATTATTTGGTCCTTTCAACAACCCTCTGAAGTAGGTACTGTTATTCCCCACAATTTACAGATGAGCAAACTGAAGTTTACAGAGATTAAATAACTTGTCCAACATAATGGCTAGTACAAGGAAAGTCAGGTCTTGAATACAGGTCTTCCTTCAAAATCTCTTTACCATAAGGCTATAAGGTTTGCTTTATAATTTATGTATGTGTATTATCTCCTCAACTAGATTGTAAGCAGAGACATGACTTATATGTCTTTGTATCTCACACAGTGCCTTGCAAATAATAGGTGCTCAATAAATATTTATCTGAATTAATAACTTTTTGACTACCAAGTTCTATTTAAAACACCTCTTAGAGTCACAGCCTTTCTCTGAATTTCAGTCTCACCTGTACTTTTGTCATCTTGGGCTTCTATTACTGTAGTAGTCACTCCCTGATCTGAATTATTTCCTCCTCTTTATTGAGGAGGGGGATATCCAGCTATGGCCCAATAACAGGCAAACCCCAAATAAACAAAGATTCATTTCTCACATAAAATCGGATGTGAGTCAGTCCTCCTCACCCTCATCATTTAGAATATGTTGCCTCCAATGTCATCATGGGGGGTATTCTGGGATACTTTTAATGGCCATAACTTATATCTCATAAATTAGAACCCAGCATCAAAAGGCTAGAAAGTCAACAGGCACCTCATTGGTTAATATCAACAGCTCCTCTCACAAGTTACATTTTTCCATATCACTGTTAGGTCAGCCTTTCCAAGTGATCCCCTTCCTGCCCACCATTGCCTTATTCAAGACCTAAAATAGCTCCCTATTTAATGAAGGTGTCTCTGAATATTTAAAGTCTGCCCTGACATGACCCTGCATTACTCAACTTGAAGCCCTGACTC EMBV3_02748 TGGAAGTGCAGAACTGGGTTATCCTTGTAAAAACCTGGAGACTACGGACTTCCCTGGTGG Gene GeneID:767824|CMC1:NM_001076548:238_cdna UTR3_Alt 2 NULL GeneID:767824 22 GENE CMC1 MGC126984 COX assembly mitochondrial protein homolog (S. cerevisiae) EMBV3_27874 CCTTCCAGCAGCAACATGAAGCGTGCAGCCTCCTTGAACTATCTGAACCAACCCAGTGCA Gene GeneID:767885|KLC4:XM_002697249:451_cdna Constitutive 0 NULL GeneID:767885 23 GENE KLC4 NULL kinesin light chain 4 EMBV3_10711 ACTGTCCAGTTGCAAGAAACCAAGCTCAGGGCTCCCACTGATCCTGCATTATGGTAGGTT Gene BVT0102_138676 + 0 NULL GK000021.2:6206081-6232513 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12006 CATACACATATTTATCTTTACATGCAAAGAATTCTAGCGATGGCTATAGATGAACTCAGG Gene BVV0102_184648 + 0 NULL GK000010.2:43599998-43640453 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00017037 TCONS_00017040 TCONS_00017034 TCONS_00017036 TCONS_00017039 TCONS_00017038 TCONS_00017035 1 XLOC_008954 Coding TCONS_00017034 XLOC_008954 Coding Coding NIN 10:43635713-43691584 j TSS11736 8570 1 TCONS_00017034_5 1200 0.0271878646441073 25 0.84705566493646 1.01903214046218e-10 8.62204076099502e-05 2.76923553608302e-07 8.65506314417204e-06 5.15400871483643e-05 1.63255798903037e-07 1.00327350490109e-17 7.79452648016773e-05 0.000202637293387276 2.49447440944398e-08 3.36167606152469e-49 2.95606642004043e-24 1.08971420880425e-07 7.94679075695045e-05 5.67511766765507e-31 0.00109845838984167 0.000799420754824649 0.00268096181631481 4.9507955934436e-07 0.000156111113974874 5.51138522660511e-39 0.0010249019076501 0.00136562980388422 0.0016708345496346 0.000206987024156156 3.39840978586991e-05 1.365550788797e-21 7.93857088410311e-05 6.65344028743949e-15 2.00227309541553e-05 XM_003586563.2 NIN PREDICTED: Bos taurus ninein (GSK3B interacting protein) (NIN), 0.0 9651 100.00 0.624270711785298 XM_005267735.1 NIN PREDICTED: Homo sapiens ninein (GSK3B interacting protein) (NIN), 0.0 5781 83.97 0.623570595099183 TCONS_00017034_5 sp|Q8N4C6|NIN_HUMAN NIN_HUMAN Ninein; 0.0 996 87.22 0.481666666666667 0 coding 0 0 0 0 -0.571549364929634 0.319013495606075 -0.126083015689328 0.146387078259726 TGCTTCATTTGAACTTCTGGATCAAATCAACACTTGGCCAGTTAAGATTTTGGAACCCAGATGATTTGAAAGCCTCACAGACTGGGTCTTTGGCTCCCCAAGACTGGATAGAAGAGAAACTGCAGGAGGTTTGTGAAGATTTGGGGATCACTCGTGATGGTCACCTAAACCGAAAGAAGCTGGTCTCCATCTGCGAGCAGTATGGTTTGCAGAATGTCGATGGAGAGATGCTTGAAGAAGTCTTCCATAATCTTGATCCTGATGGTATGATGAGTGTAGAAGATTTTTTCTATGGCTTGTTCAAAAATGGAAAACCTCTTACACCATCAGCATCTACCCCATATAGGCAATTGAAAAGGCACATCTCCATGCAGTCTTTTGATGAGAGTGGACGACGGACCACAGCCCCATCTGCAATGATGAGTACCATTGGTTTTCGGGTCTTCTCCTGCCTGGATGATGGGATGGGCTATGCATCAGTGGAGAGAATACTTGACACCTGGCAGGAGGAAGGCATTGAAAACAGCCAGGAGATCCTGAAGGCCTTGGATTTTAGCCTTGATGGAAATGTCAACTTGACAGAGTTGACACTGGCTCTTGAAAACGAACTTTTGGTCACCAAGAACAGCATTCACCAGGCAGCTCTGGCCAGTTTTAAGGCTGAGATTCGGCATTTGCTGGAGCGAGTGGATCAGATGCTCAGAGAAAAAGAGAAGCTACGGTCTGATCTGGACAAAGCTGAGAAGCTGAAGTCTCTAATGGCCTCAGAGGTGGACGATCACCATGCAGCCATAGAGCGGCGGAACGAGTACAACCTCAGGAAACTGGATGAAGAGTACAAGGAGCGAATAGCAGCCTTAAAGAATGAGTTTCGAAAGGAGAGAGAGCAGATCCTGCAGCAGGTGGGCAAGCAGCGTTTGGAACTTGAGCAAGAAATCGAAAAGGCAAAAACAGAAGAGAACTACGTCCGGGACCGCCTCGCACTCTCTTTAAAGGAAAACAGTCGTCTAGAAAATGAGCTTTTGGAGAATGCAGAGAAGTTGGCAGAGTATGAGAGTCTGACAAACAAACTTCAGCGAAATTTGGAAAATGTTTTGGCAGAAAAGTTTGGTGACCTTGATCCCAGCAGTGCTGAATTCTTCCTGCAAGAAGAAAGGCTGACGCAGATGAGAAATGAATATGAGCAGCAGTGCCGGCTATTACAAGACCAAGTAGACGAACTCCAATCTGAACTGCAAGAATATCGTACACAAGGCAAAGTATCCAGGCTTCCCTTGCAGAACTCACTGTCAGAAGAACTTGATATTAACAGTGGTTGCATAGAGCCTGACCAGGGGCTTGGTTCTGAAGAATGCAATCCACTGAATATGAGCATCGAGGCAGAGCTGGTCATCGAACAGATGAAAGAACAACATCACAGGGAGTTGTGTCACCTAAGACTGGAGCTTGAAGATAAAGTGAACTATTATGAAAAGCAGCTAGATGAAACCAAAGTTGCCTTTGAAAAGGAACAGGAGAACATGAAGCTCAAGTGTGAGAATGAAGTACACATCTTAGAAGAACAAATAAGTGACCTTAAAAATAAAATTGCAGAACTTCAGGGCCAGACAGAGGTACTCAAGGAGGCACAGCACGTGGCTATCTGCAGACATGAGGAGGAGAAAAAACAGCTGCAAATGAAGTGGGATGAGGAGAAGGCTCACGTGCAGGAGGAGCTGCGGCTGGAGCATGAGATGGCACTCAGGGCTAGGCTGGAGCAGGTGGAGGAAAGCTTTAACAGAGAGAGGGAAAGACTCGTCCAAAATGGCGCCTGGACAGAGGAGAAGGTGAGGGGCTTGACTCAGAAACTAGAACAAGTTCACCAGGAGCAGCTGAAAAGCCTGGTGGAGAAACACATTCTTGAGAAAGAGGAATTGCAAAAAGAGCTCTTGGAAAAACACCAAAGGGAACTACATGAGGGAAGATATGAATCTGAGAAGCTTCAAGAGGAAAATTCTATTTTGAGAAATGAAATTACTACTTTAAATGAAGAAGACAGCATTTCTAACCTGAAATTAGGGAAATTAAGTGGATCTCAGGAAGAAATGTGGCAAAAAATAGAAACTGTAAAACAGGAAAAAGCTGCAGTTCAGAAGATGGTTGAAAATTTAAAGAAACAGATTTCAGAATTAAAAACCAAAAACCAGCAGTTGGATTTGGAAAATATGAAGCTTAGCCAAAAGAACTCTCAGAATCAGAAAGAGCTGCAAGAACTTAATCAACGTCTGGCAGAAATGCTAAGCCAGAAGGACAAAGAGCCAGGGCACAGTGCATGTGAGGAATGGGAACAAGAAAAGTCTAATCTCAAAGAAGAACTGGAACACTGTAAATTGCAGTCTTCCACTTTAGTGTCTTCTTTGGAGGCAGAACTTTCTGAAGTTAAAATACAGACTCACATCGTGGAACAGGAAAACCTCCTTCTCAAAGATGAATTGGAGAAAGTAAAACAACTCTGCAGATGTCCTGATCTCTCTGACTTCCAGCAAAAAATTTCTAGTATTCTAAGCCACAATGAAAAACTGCTGAAAGAAAAGGAAGCTCTAAGTGAAGAATTAAATATCTGTGTTGATAAGTTGGCAAAATCAAGTCTTTTAGAGCACAGAATTGCTACTATGAAGCAAGAACAGAAGTCTTGGGAACACCAGAGTGAAAGCTTAAAGTCACAACTAGTGGCTTCACAGGAAAAGGTTCAGAATTTAGAAGACACTCTCCAGAATGTAAACCTACAAATGTCCCGAATTAAATCTGATCTACGAGTGACTCAGCAGGAAAAGGAAGCTTTAAAGCAAGAAGTGATGTCTCTACACAAGCAACTTCAGAATGCCAGTGACAAGAACTGGGCCCCAGAAATAGGCATCCATCCATCAGGATTCCATAACCAACAGCAAAGGCTGTCCTGGGACAAGCTGGATCACCTGATAAATGAGGAACAACAGCTACTTTGGCAAGAGAATGAGAGAGTCCAAACCATGGTACAGAACACCAAACCGGAACTCATACACTCCCGGGAGAAGGTCCGTCAGCTGGAATCCAACCTTCCTTCTCCTAAGCACCAAAAACATCTAAATTCATCAGGTACTGTGAAGCCCACAGAGCAGGAGAAGTTGAGCTTAAAGAGAGAATGTGAACAGTTTCAAAAGGAGCGATCTCCTACTAATAGGAAGGTTAGTCAGATGAAATCCCTTGAACGAGAATTAGAAACAATTCATTTGGAAAATGAAGGCCTGAAAAAGAAACAAGTAAAACTGGATGAACAGCTAATGGAGATGCAGCACCTGAGGTCCACTGTGATGCTTAGCCCATCCCCTCATGCTTGGGAACTGCAACTGCTCCAGCAGCAAACCTGTCCAGTGGTTCCCAGGGAGCAGTTTCTGCAGCTTCAACGTCAGCTGCTGCAGGCAGAAAGGATAAACCAGTGCCTGCAGGAGGAACTTGAAAATAGGACTTCTGAAACCAACACACCACAGGGAAACCAGGAATACCTGGTAACTGTCATGGAGGAACGAATGTTGGAAGTTGAACAGAAATTGAAACTGGTGAAAAGGCTTCTTCAGGAGAAAGTGAATCAGCTCAAAGAACAACTCTGCAAGAATACTAAAGCAGATGCAATAGTGAAGGATTTGTATGTGGAAAATGCCCAGTTGTTGAAAGCTCTGGAAATGACTGAACAGCGACAAAAAACAGCAGAGAAGAAAAATTACCTCCTAGAGGAGAAGATTGCCAGCCTCAGTAATATAGTCAGGAATCTGACACCAGCACCACTGACTTCTACACCTCCCTTGAGGTCATAGCCAAGCCAAAGGATGAACAATTGTGCACTTTACTGAAATGGATGGGACATTTCAGATGTACTCTCAACTGTTGTTGTTGTTGTTTTCTTAGAAACCTTTAGTGGCTTAAAGTTAAGCCTAACCTAAAACTTCCAGGAACAGAATTAAAGTCTCTATTCACTGTAATTAGTTTTTATAAATAGACTGTAATGGAAATTGCAAACAAATATTTATTTCACTGAACTATTCCCAAGCTTTGAATTTTTAAAAAATATTTTAATAACCATCAAGAAGGTGATATGAAAACAATTCAAGAATTTTAAAACCCCAGTTTTGAATGAGTTTTTGAAAATTACTATTATGTATAAATTACTATTATGTATACGTTATATATAAATTGCAGATTTTTAAAAATTGAGATATTATTGATTGTTTTGATCTTTATTTTAAAACCAAATGTATGTCTTCTCATACACTTAAATATGGAAGAGTCATTCTGTTTCTAGTAGTTTGGATTTTTTAATTGTTAGACTTTCTGTTTGGTAACAGAAACTAGAGTCAATAACCACTGAGGTCAGAAAAGGCAGAATTCATAGAACTCTACCTTCTAATACCTATGACAGTATTACCACTCTTGATGTATTACAGATATAAAACTCATTTACTCAACTGCACTGTAAACTAATGTTAAAACTTTACTTTCTTTAAACAATCTTTTTTTTTCCTTCTTAGAAGTTTCTTTGGGAGTTTGTCTTCTAAGAAATGGATAAAGCCACATTCTTAAAACATTTGAACTATAGGGTAAGCACTGAACAAACTGCTTTGGAGTAAACAGCTAATCCTAAAAGAGAGGAAGCAAACCATGTGGATTTTTCTCTCTTTAAGGTCTTGGAGTTGGTGAACTTATATTTGGGGTTTCATCAAAAACTCAGGGAACAACACTTTAAGTCATCTTCCTGAAATACTGTAGGGCTCTTTAAAAATTTGAAATGTATAAAATACATGACTATTTATTTGTTGTATATTTAGAGCCATAATGGGATTTTTATTTCTACATTTTTAATGAATTTAATTTTCTGGGGAAAGGGCCTTGCTTTTAGAGTTAAAAACCTTTTAACTTATGGAAGAGTTGTTATTTGCTTGTTTGTTTAATGTGGGTCAAAATCTCCATGCTTCCTATTCCTCTGTACCTTGAATCTGATCATAGAATTTCATACTGTAATAAGAACTGGCATGCCATCTGAGGTAAAGGAGTGCCAAATAGAATTTTCCAATCAGTCTCAAGACTAGAACATTATAGCGCAGTAAACGTTCTGAGTAACTTTTTTCCCCAGGTAAAATCCCGGCTTCTAGCCAGGAATTGGTTGGTAAAGAACTTACTGTGTGTGGGACGCAAACAGAGCTTATCACAGCCACCTATTTGTTTTTGTGGAAGAGTAATTAGATCACAAAAATTCACTCTGCTGTATTAGAGGAAAGTCAAGTCCATCAATTTTTTATAAGAGGTATCACAGCAAAATCAAACACTACCTTATGGGCAGGAACAAAACATGAAGCAAACTGCTAAAGAAAGCTCTATTATCAGAAATCCCCGATTTCCCCTGGAAAAGAATTAATTTTAATCCCTCCCTATAGTTATATTTAAAAACATTTGATATCTGCTGTCATACTTTCCATAATCATTTTTGTCCAGTGCACACATTACTAGTAAACTCAACTACTTGTATGGCATTGACTAACACTTAAAAACTGTGGATAGGCCTAGGTTAAGATCGTAAATAAACTAAGATCGTAAATAAAAAAACACCTGTGGTGTTTTTATGTGATATGCTTTAAGTTATTCAAGGCTTTTGCCATCAGAACTGAAAACCAAGCATATTTCTCAAATAGATGGCTTACCATATGATCACATATGTTGTATTTTTATCTTTACTTTTTACATTATGAAAAGTGTAGGTTAATTTGTTTATTTCTTATAAGTCTGTATTTATATGTATATAAAGTGCTGTACAATGCGTGTAAATATGACTTCTGGAAAGTTTGACTACATTTAGAATCCCTTTATCTAAAATCAAAACGCTGCTCAAATGAAAGTTAATTTAATATCTAGGTGCTTACTTTTTGTTTTACTGAACTTAAAAGACTGGAAAAAAGATTAACACAAGAAATAGAGTTACCTTAAATTTATATATTTGTGCAGCAGATTATTTTTGTAGACTAGAGTGGGAATTTAACTGGCAATTTATAATATAGCTTACAGCTTTTAAAAGAATTTAAAGAAATTAAATTTAAACTATTAAATATTTAGATTTTGCTTTTAGACTTTATAATAGAACTCCTTAAAATCATGTTATATATTTTATAGTCATTTAATTCCTAGTTTATTAAAAGTACTGGTTGTTAAATTCACTTGATTTCTTAAGAACAGTTATTTAAATTAGTTTTAGGAGATAAGATCTTCATTTCAAGGAAGGAGAATCAAGTTTGCCATTATGATAATGTTACCCTTAGAAAGGGGAAATGTGAATAATAAAATCTACATTGTTCTATTTTGCTTTCTTCTGCTTTTTAGAAGCCTGAACTCTTAAGCTCAAATTTGTAAGGGGAGAAAAGTAGATGGGGAGGGTAGAACCAACCACAGTATTTATTTTTCTAAAACTTAATAAACCCATATTTTTAAAAACTATTGTAAATGTGAATTCTTCCCAGATGCTTCAAATGCATTGTTTATATATTTAACCTTAAACATATGTAGATTACAAAGTCATAGGCTTTCAAGGTATAGGAGGAGTTCTTACAGGTCTAGCATTTTGATAATGTACCAATACCCAGAGTAGGTATTATGATGAGGAACTTTTGGTTTTTTAAGAATGAGTAAAACTTCAATGTGTGAAAATGAATTTTTTATTTTTGTGATTTCTTTTTTTCTGAGTGAAGGAAAAGAGAAATGTGTTGCTATTGTCAGAATCTTAAAGATATTCCCACTCAAGGTAAGGCTAAGTGCTTTGTGATAGTATTAAACAAGTCTTGTTTTGAACGGATTACCAAGTGACTAACTGAAATGGTATAAATTATGCAAGCAATGCCAAAACTAAGTCAAAACCTAATAGCCAAAGCATTCCTTACTTAAAAGTTATTAATTATATCATGTTTGGACCTATTTGAACATCTCAGCCCTGTAAAACATTTTTGGTTTTATGACATATGGATAGCAGTTTAACAATAAATCTATCCCAAGTCAGCTTTTTGTTTCTCAGATTTTTTTTGAATGATATACATTAAATCTGTTCTTATTGGAAGACATTATCACAGCATGATTGAAAGGAACATTAGTTTTGTAAAGGAAAACCTGAGTTCATCTATAGCCATCGCTAGAATTCTTTGCATGTAAAGATAAATATGTGTATGTTTATATTGACTTGGTATATTTCATCTTAGCCATTCTATCCTAGAATTATTTTACCATGAGCTTAAAATGTAAATAAATAATTTTGCAAATATGGCCCTTGTTTTCTATACACCATGAACTTTTGTAAACAGTTTCGTATGTTTATCATCGGTTTTTAGAGTGAAAGCATCCAAACATTGCACTAAACACATTTTACAAATGCAGAATCTCTGGAGCTCCCACTCCAGACCTACTGACTCAGAGCCTGCATTTAAACCCCTCCGCCGCCCCGAGTCCCAGAATGATTTGTATGTGATCTAGAGCACTGCTTCTCCATTTCTGTCACAGAATCAACGACCATCACACCAGCCAGTTTGAGATCCCTGTGGTGCTTCATAATTTACTTCTAAAATCCTGACAACCTTGGGTGAGGCCCTACTTGAGATTTTGGTTGCTTCAGGCATGCCTTTATTTCACTTGGCCATATTTATGGGTGATTCATAATTTTCAGTTATTTGCCACTACTGGAAAAAAAAACTGACCTAAAAGCACATTAAGTTAATAATACTGAGTACTGAAATATAGAATGGAAATATTGGCCAAATGAGACCTCACAAGCCATGTTTTATTTATGAAGCTTTTATACCAATCTCACACTGCCTTTATGTTACAGGAACTATTATTAACCCCATTTTACAGGTGAAAAAACTGAAAATTAGCAAAGTTATGACTTACTCAAGGCCACACAGCCAGCTCAGTAAGGAACTCAGGACTCACTAGGCAGGTTTGTCTGTTCTAGTATTTTGCAGTGTAACAGGTATCCATTTCTCCTTCCGGCAAACAACATTTAATTGGTTCAATTAATTGGTATAATTAACAATTAAACCTACCATGCACACTACTCTCTAAAGAAAAACATAAAAATTATTGATTTTCTGTTTATAAACTGGGGTAGTGTAGTGAAATTTATACACACACAAAATAAATAGAAAAAATTAGATCAGTATGAGAAAACAATCCAGTTTTCTTGATGGACTCAGTGCTACAGGCACCAGGATAAGCAAGATTAGTGTCCTCAGGTATTTTAACACAGAAAATGGGGGAAGTTCTTAACCTAGCATTAAATATAACTGTACTTCATTGTTTTGTAGTCTCTTTTATTCAGGTTGCATTGAAAAAAGTCTTACTTTTCTAATATATACCTAATACACATTTTCCCATAATAATGATTGAATTTTGTCCCAAAGACCAATAGTTACTACAAGTCAAAAAAGTGTTTATTCTTTGTTTCGTTTTGCCTCATTTGCAATCAGGAAAAATGACTAATTTTGAAAAATGGACATATTAAAAAATTAAAACTTCAAGAAAGGAAC EMBV3_37363 GAGCTGGTCCCAGCCAGTCGAGTGGCCTTGGCCGCTGCTGCCAGGGGCCCTGGTCGACTA Variant GeneID:510683|PINK1:NM_001099701:126_cdna 785^891 2 EMBV3_10278 GeneID:510683 2 GENE PINK1 NULL PTEN induced putative kinase 1 EMBV3_13663 CCACCAGGGTCTACTCAAGTGCCGCTGCCGTATGCTCTTCAATGACCTGAAGGTTTTCCT Gene GeneID:100298482|LOC100298482:XM_002685588:198_cdna Constitutive 0 NULL GeneID:100298482 2 GENE LOC100298482 NULL hypothetical protein LOC100298482 EMBV3_15771 GGATCAACCTTGAAAAAATTCCTGGAGGAGTCTGCATCAATGAGCCCTGAAGAACGAGCC Gene GeneID:520170|UCHL3:NM_001040541:2_cdna Constitutive 0 NULL GeneID:520170 12 GENE UCHL3 MGC133829 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) EMBV3_10321 ATGGACAAGTGAAAGTGGAGACGTGAACAGTTATTAAGAGGCTGTTGGAATAGCCCAGAC Gene BVV0101_067772 + 0 NULL GK000017.2:64538584-64551610 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38336 TTCTGCTCTTTCTCGCCAACACTACCCAGGACTCTTGCTACCTGGTTCCAGCTCCAGACA Gene GeneID:532459|TMEM115:NM_001083461:226_cdna Constitutive 1 NULL GeneID:532459 22 GENE TMEM115 MGC137897 transmembrane protein 115 EMBV3_17873 CAGCCACTGCTCACAGCTGATTCAACATCAGGTAATTCATACTGAGGAAAAGCCCTATGA Gene GeneID:790311|ZNF582:NM_001105026:73_cdna Constitutive 0 NULL GeneID:790311 18 GENE ZNF582 MGC165979 zinc finger protein 582 EMBV3_11352 TTTCAGTCCAAATCTCTGCAAGGCTAAAATCGCCAGCAAACCTCCCCTCTTCTCCCCGCT Gene BVT0102_083345 - 0 NULL GK000005.2:74227882-74255689 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192547 TCONS_00192546 1 XLOC_117210 NonCoding TCONS_00192547 XLOC_117210 NonCoding NonCoding - 5:74251921-74255632 - TSS144059 3711 1 TCONS_00192547_5 93 1 0 0.00198070691191568 0.00215125367743987 0.00109207106045961 0.00121452556271226 0.00445210853377918 0.00084923054513858 0.000838010357762956 0.000849809325628141 0.00089407629675123 1.63975777482528e-10 2.86450162397477e-06 2.11976159556952e-05 0.00049845389241854 0.00105399633633891 0.000167076859866864 0.00468452131362556 0.00589939833830661 0.00108855453808007 0.00191628828718432 0.00103417796647923 6.08513018371695e-05 0.00074737675394853 0.000419477242313638 0.00167149303326103 0.00253474493077266 0.00102628019486748 0.00165464780206694 0.000228276188605878 2.017149407478e-10 0.00051357596752252 XM_005206785.1 RBFOX2 PREDICTED: Bos taurus RNA binding protein, fox-1 homolog (C. elegans) 2 (RBFOX2), transcript variant X1, mRNA. 0.0 6516 100.00 0.973322554567502 NM_014309.2 RBFOX2 Homo sapiens RNA binding protein, fox-1 homolog (C. elegans) 2 (RBFOX2), transcript variant 2, mRNA. 0.0 3054 79.32 0.973053085421719 0 noncoding 1 1 1 1 -0.0552252076011855 0.759444221024753 0.0849008248304807 0.478261591471261 TTTTTCCATCTTAGAATTCGGATCCAACCTCTATCTTTGGAGCCTCAGGGGGAGGCAACAGCAGGATTGCTGAGGATCAACACACACAGGCAGGAGAATGGTGTTTCTCTCTTTTATTTAAAAACAGTGCTTCATTACCATTTGCAAAGGCAGAGGCAGTGCTCTTCCTTTGCTTAGAGTTTATAAAAGCCAGCAACATGATCAATAATTTATACACATGGATAGTAATACAAAAAAAAAATAAGGAATCAAAGCTAAAGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTAAAAGCTACTATACAATATGATTCTTAACGAGAGGGGAGGGATTAGAGACTGTCACAAAGCCCTGGGTGCTTCTCTGGAGTTGGCAGGGAAACAGGACCCTGGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCCGGGGGGCAGGGAGGGGAGGGAGAAAAGGCCAGGCGGTGGATTATGCAAGCATCCCATGGGAGGCCCCCGTGCCCTGCAGGTACCTGTTTTGCCATGGCATCGGGAGGGGGCCTGAGAAACTGCAAGTAGGGATGTTTCCGTCCCTGCCACGGGGAGCGGGGAGAAGAGGGGAGGTTTGCTGGCGATTTTAGCCTTGCAGAGATTTGGACTGAAAAGCTCAGAGACTCAGGTGGGTCAGCCTGTCGGGGACAAGCCAACCCGCCCGGCTCTCTCAGCACTCTGCAGCCCTAGCTTAGTGTGTCAGCCCCAGGTTTGCTCCAGCTGTTCACAAGCAGGATTATAACACAAGGAGAAAACAATTAATATCCCGTAGGGGGAAAAAAAAAAGGATCAATTCATCACTCGATATATAATACAGCCAAAATGAGCTGCCAAAACTTTGCACACACACACACAAAATACTGTGAACAGAAAAATACAAAAAAAAAAATGAAGAAGCTGGGGGCCTGGCGGGGTATTGATGCTGCTTAAAGCACTCATCGGTCCCCAGAAAAACCAAACCAAAAGACATTTTTTAAAAAATTCAAAAACGTATGTACCCCCTGGGAATCTGGCATTGGTAACAGGAGTGGGGAGTGGGGGTGCGGGGTTGCGGGGAGAAAAGAGAATTGCTGTTCCCTTTTTGCTGGCGGGTGTGAGCTAAGCCCTCACCACACCGGCTGGTGTGTGAGTCACTGCCAGGCGGGGCCCCTCCAGCTGGCGGTCCCCTTCAAGGCCAGGTCTGAGTGGTGGCGGATGAGCCGTTCTCTCCGTTACCAAGCCCTGCCAACCAGCACTACCATGGCTGAAGGATCGACCGTTTTCCTGAGTAAGCTGTAACTGGCTACAGTTCTGGTAACGTGGAGAACTCAGCTGCTGTGGCCGCAGGCCCACGGGCTCTGTGCGAGTGCTCCCCTGGCCCCCTCGGCTCCTCCTTCCTAGTGCACTGGAGTTGGGAATTGGAGAATTTGCTGTGGCCTGGTCTGGAAGCCTTAAAGATGGGGGCCAGGGACTCGACGGCAGCCGCTGGACCGGAGGGCACCCCCCGGCTGAGGACACCCAGAGTCTACTTGGAAAGGGCCCTGCTCCTCGCTGCAGCTCCTGATGGCTACTGCCTGGTTGATCAGTCAGGCGAGGATGAAGGAAGAACACAGGAGAAGGGAAAGGGAGGGAAGAGGCTTTCAGACAGTAACATTTCCAAAAAAATAGTGTTTTATGCAACAGAGCATCAGGCTTCACCGGTGGATACTACAAACGGTCAAACATTTTCAAGAGCATGACAAAAGAAAAACACACAAGCTTACGTTGGATGTTCACCTTGCCCACTATATATTTTTTTTTCCTATCTTAAAACAGTGCAAACAGTAACTTATGCTTTTAAAACACCACTATCCCTTCCCCACCCACCAAAGTCCCTTTCCTCCTATCTCCTGGGGGAAACAAGTCTGTGATTTTGCACATGGTACTGTGCTATAGGGGGTTGCAAGCAGCAGAGAAGCGGCGGGCTTGGTGGAAGGGGGTGGTCCCCGGGGCTCCCCCTTCCCCTCCCTACGGCTCTGCCCTGTCCTCGCTGGGCTCATCCTCCTGCCAGAGCGAAGGGAGCTGCCCAGCCCTTCACAGATAGACCTGGAGGGTGCTCCTGCCCCGGGTTCACACCTCCCTCCTATCTGGAAGCTATGTGACTAGTTAGAAGGTGGCGATGACTCAAACTTCTCTGCCAGAACTCTAGGAAGTAGAACCTAAACCAAGAGCAGTTCAGCCCCTGAGGAGTCACTTGCAGGAAAAGCTGCTATCATTGATTTCTACTGAATAGAGCCCACTAGCTCCCCTGAAACTAAGAGCTGAGCCCCAGTTCCCTTCTTTTTCAAGGAAAGATAATATTGGCTCAATTCCACCCATGGCTGCTGGAGGAGGATGGTGCCGGTAGGTTTTGTAAAACCTGAGAGCCTTAAAAATGACAAATCGCAACAGCTGATCAGGGTCAGTGGGAGCCGAATTACGTAATATAATGGGTTCTGGAGAAGCTCTGAGGACAGCTCTCTGGGCTGAAAGACGGATATTCAGCTAAAGGTGTTTACTAGAGGATTCCTGGAAGGAGCCCGGCTTCTAAGAGTAAGAAGTGTGGTAGAGAAGTCTACATGGTGACCTACAGTTGAAGTCATTCACGTGACTCAGCATGGGTAAGTTTTCTAGACTTATCCACCAGCATCCTCTAACAAACTCACGAGATGCCAACTCTCTTCTGACTTTGTTTCTGAGTCCACTGGGAACGAAAGTCAGGAAGAAACAAGCACTGATGGTTTGAGGAACCTGCCTCTGACGAAGCTGCCTGTGTGGAGTCTCGAAGTTCAGAAGCTGATGGGGCAGGTTGATGCCAGTAAACTGAGGTGCTTCAAGAACCCCAGTCAGCGCTGACACTGAAAACCAAAGGCCCTTTAATAACGATTTAGTCTTTCTTAGTAAAGGGAGCTGAAGGAAGCAGTGTTAACACCATCCCTGGAAGTACAGCAGAGGCCCACTGGAAAACACAGAGCTTGCCTACCGCATCCTCAGCCAGAGCCAGCTGAACTGAAATGTACGAAAGCTCAGGCCTCTGCCTCTTTTAAAAAGGGCTGTAGAAGCTGCCTTCCCTGCCTTTCCCATCACTATTCCCTCTTTCTGGAAAAAAGAAAAGAAAATCCTTAAACTCACTGCCCTGTTCTCTTCTGCCATGGATACAACTATTTAGAATTTGGCCTTGTCTCCACTGAAGCAGTGGCTCACCATTTGTTAGAATGGCCCCTGTATGAACAGGACACAACATTTCTCTCAGATTCTTTAGTCAGTAAAAGCTCTCCCTCAAAACAAAAGCGAAAGAAAGAAAAATCCTCTCTGCCCCCAGTCCCTTGGACTGTGAAAGCCCCACATCCCATTCCCCCACCCCGAACTGAAATACTTATATACACACAAGAAAAATTGTCTTAACAGCAACAAACCAAACTTTGGCTTGGGGAGGAGAACCCTTAGAAAATGGCCAATGGACTGGGCAGTCTGGCGTACTCTAATCGTGCATTCCTCCCCAGAATGAGTAAGATTGCATCGAGGCCTCTAGCTTCCTTGATGTCTCCCCTGGTTTCAGTTTCAGGGAAGCCTCTCTCCCAGTTATTAGGAGAGAAAGGATTCTGAAGGGGGAGAAGATATGTATTATACATGACAGGTCAG TCONS_00195554 TCONS_00195542 TCONS_00195543 TCONS_00195544 TCONS_00195545 TCONS_00195546 TCONS_00195547 TCONS_00195548 TCONS_00195549 TCONS_00195550 TCONS_00195551 TCONS_00195552 TCONS_00195553 TCONS_00195555 TCONS_00195556 TCONS_00195557 TCONS_00195558 TCONS_00195559 r 3' 59 TCONS_00195554 TCONS_00195542 TCONS_00195543 TCONS_00195544 TCONS_00195545 TCONS_00195546 TCONS_00195547 TCONS_00195548 TCONS_00195549 TCONS_00195550 TCONS_00195551 TCONS_00195552 TCONS_00195553 TCONS_00195555 TCONS_00195556 TCONS_00195557 TCONS_00195558 TCONS_00195559 r 3' 3769 EMBV3_38957 CATTTCTGCACGATCACCGGTTCTGAATGTGGGAGACTCTGGGTGCATGTGTGAGTTTCT Gene BVV0102_053497 + 0 NULL GK000003.2:3636913-3692342 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175140 1 XLOC_104923 NonCoding TCONS_00175140 XLOC_104923 NonCoding NonCoding - 3:3673565-3675217 - TSS129899 1652 2 TCONS_00175140_1 75 0.0811138014527845 1 0 0 0.000285882328299316 3.92118568853538e-05 5.52939865816119e-05 4.18404443469125e-05 0 0 0.000261364959587398 6.2089373550151e-05 0 0 0 1.73685347963712e-06 8.25761517761346e-05 0 0 0 0 0.00037330526055249 0.000174126619292174 0 0 0 0 7.12979308693148e-05 4.26481161153585e-06 0.000134774684205413 0 0 0 0 noncoding 0 0 0 0 -0.124479716960074 0.285103714847686 0.0674171301109238 0.181561626502572 CCCGAGTTCCAGTCCTTAAGGGGAAGAGCATTGGAAAAGGGGACATGAGCCTCTGGAAATGTCATCTTTGTACATGGGCACCACGAGTCAACTGAGACTTTGAATACTCATGACTTGATCTGGCTCCGCTGGGGTGGTGATTGTGAGACGATCAGTCCTAAGTCCTGGCCCATGACTGGAGAGGAGGCTCCAGTGCTCTGTGAAGCTAATGAGGCCCAGCTGAGTCCCTGCAGCTGTGAGACGCTTCGTCCTACAACAGACCCGGTTTGTTCTAACCTGTATTTTCCAAGAGCAAACAGATACAGTTTAGGCTTGGGGTCTGCCCTGGTGATGAAGTACTTGTGGCATATGTGGGTGAGAGGCTTGGCTTACGTAGGGTACTTTGGGGCCACAGTATAAATTAGGGGAACAACTGAGACTAATTTATAAATTGAAATAATTACTGAGAGTTGCCTCACAAGTTACTCAAAGAAATCTGGAGGGAAAAAAGCTGTCCTGGGCAAGAAGTTTCGATATGCTGTGGACCAGATGTCAGGGTTTAAAGGGCTTTATTTAAGGCTTGTTTAGGACACTTCCCAGGATTCACAGCCTGTGCATCCCATCAGCTCTGTATGGACAACTTAGAAAGAATGCTGGCAACCTAGAAAATCTTACTTGTCCTGTTTATGATTCCAGGCTGAGTGTTGACAGGTTTTATGTAGGAGTGGCAGAAGTCCACTTGTCACACCCTAAACCTCCAAATCACCATCCCCCGCTGCCCCTACTTTCTCCCTAGCAATGGGGAAACTCATTTCTGAGAGTGATTCCTGCTTGTAGGAGCTGATGCTGGCTTTTGTCAAGTTCTGGATGGCCCTGCAGTGCAGGAGAAACTCACACATGCACCCAGAGTCTCCCACATTCAGAACCGGTGATCGTGCAGAAATGTTCTCATGTGAAAGACTCCATCACTCTGAGAAAGAAAAAGGCAATGCAGGTGATGGCAAGGATAAAATCATGCAGATTGCTTAAGCTACTTGACAGCAAGTAACATTCAAGGCTTTTTAAAGATACTCTTTGCATACAATTAATGTGCTGATTACAACAATTCAACAGTTTAAAGCAGCTCCTCAATAACTTACGTTGTCAACACATCTAGAAGAAAAAGCTAGACAAATACTGTTCTGGATAATTGGTTTATGAAAAGTCAAACAAATTGAGTACCCTTTTGTCTTTAGTCATCACCCTGGAGGTTTTATGGGGGAGGGCTAGCTTAGAGACTCATTATTGGCCTGCCTGATGGAACAGTGATGTCCTCAGGGTCACTAAAGGGTCCTGACTCTGAATGCCCTGCTCTGAGCTTTCTGAGGTTGATGTGTTCATCAACCTCTTGGTCATCTCTGCTCTCTGTTGTCATTTTCTGTGTTGACAATGTATTTCTAACATAAGTTGTCATTTTAGCCTCTGTAATCATAACTATCTAAAATTTGACTCCTTGGCTTCCTGGGTTGTTTTTTTTTTTTCCCCTTTGGTGGTTGTATTTTGTGCCTCAGTGTTTTCATCTTAAAATGGGGTTGATAATAAAACCTATCTGATTTGGTTGTTACATGCATTACTTATGCAAACTATAACACAGTTGTAGTATGGCCATCATGTAGTAAGTTCTTAATAAATAT TCONS_00168248 TCONS_00168249 . 5' 16198 TCONS_00168248 TCONS_00168249 . 5' 16198 EMBV3_42807 GAAGTGTCCTCACCCCCACTATGGCTGTTTGGCCCCCAGCTCACAAGCCTGTTTTAGGAT Gene GeneID:787512|CMTM3:NM_001099399:492_cdna Constitutive 0 NULL GeneID:787512 18 GENE CMTM3 NULL CKLF-like MARVEL transmembrane domain containing 3 EMBV3_41261 TGGGCCTCTCTGGCCACTGCTGCTCACACTGGAACACAACTCTGAATCCTTTTCACCAAA Gene BVT0102_250126 + 0 NULL GK000022.2:50555514-50559653 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127132 TCONS_00127127 TCONS_00127133 TCONS_00127131 TCONS_00127134 1 XLOC_077576 Coding TCONS_00127134 XLOC_077576 Coding Coding CACNA2D2 22:50552867-50557996 j TSS95159 3103 1 TCONS_00127134_1 197 8 0.396450858034321 0.00791716943432538 0.00399928629312431 0.00721378588473741 0.00560746571591287 0.00291489786420372 0.00187697475674843 0.00234046511832667 0.00405242727831483 0.00229011997883832 0.000806189664835244 9.14784475060766e-05 0.00102295298451689 0.000379927158851174 0.0036093575837306 0.00184994212375573 0.00426839799745985 0.0100228781052255 0.00528660381649196 0.00299961580353141 0.0103055168945651 0.00634918218750649 0.0050850775589795 0.00223108288450343 0.00145506540115914 0.00762069417498535 0.00682044925082391 0.00304014164113595 0.000601103914553275 0.000416313983908858 0.00104240609748177 XM_001253767.4 CACNA2D2 PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 2/delta subunit 2 (CACNA2D2), mRNA. 0.0 4444 99.72 0.79729294231389 NM_001174051.1 CACNA2D2 Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 2 (CACNA2D2), transcript variant 3, mRNA. 0.0 2520 81.97 0.79729294231389 TCONS_00127134_1 sp|Q9NY47|CA2D2_HUMAN CA2D2_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-2; 1e-108 340 96.30 0.954314720812183 0 coding 0 0 0 0 -0.207217778213568 0.224663897322035 -0.0518948893588632 0.566074439739338 GGTGTGGCCCCAACAGCCACTGTGAGATGGACTGCGAGGTTAACAATGAGCCCACCATTGCAGATTTCCTTAACCTAGCCTGGTGGACGTCTGCTGCAGCCTGGTCTTTGTTCCAGCAACTTCTCTATGGTCTCATCTACCACAGCTGGTTCCAGGCAGACCCCGCGGAGGCCGAGGGGAACCCCGAGGTGCGCGAGAGCAGTTGCGTCATGAAACAGACCCAGTACTACTTCGGCTCGGTGAACGCCTCCTACAACGCCATCATCGACTGCGGAAACTGCTCCAGGCTCTTCCACGCGCAGAGACTGATCAACACCAACCTTCTCTTCGTGGTGGCCGAGAAGCCGCTGTGCAGCCAGTGTGAAGCCGGCCGGCTACTGCAGAAAGAGACACACTCGGACGGCCCGGAGCAGTGTGAACTGGTGCAGAGACCGCGATACCGGAGAGGCCCACACATCTGTTTCGACTACAACGCCACGGAAGATACCTCAGACTGTGGCCGCGGAGCCTCCTTCCCCCCGTCGTTGGGCGTCCTGGTGTCCCTCCAGCTGCTGCTCCTCCTGGGCCTGCCTCCCCGGCCACAGCCTCAAGTCCATGCCCACCCCTCTCGCCGACTCTGAGTGTCCCTCCCCGCAGCAGGCCTCCCCGCCGTTCCCTGCTCCCCTGCCCTCCACTCCCCGCCTTAGAGCCTTGCCCCCTTCCTCAATGAAGGAACTGAGCGCTCCTGGCCCCCAGAATCTGCGCCTTGGGGTGGGGGTGGGGGGAGCCGAAGGAGGACGCTGCAGGTCTCTGGCCCCCAAGCCATGTCTCGCTGCTGAACTGTCAAAGTGTCCCCAGACCTCTCATTCCCACTGGACTCACCAACTCCTGAGGGCTGGGCCAGGGAGGCCACAGTACTGGTGCCAAACCAGGCCTCCACTGCCCGCCCTGCCCTGAGGCTCCCTTTGTGTGGGAGACCTAGGCCTTGCCCCACCTGGACTCCTCTAACCTGGCCCTTCTGCCCCACCCAGGACTAAATCTGGATTCCCGGGGAATAATAGAGGAAATGGTGATGGGCAGTTTGAGGCCTGTGCATCCCAGCTTAAGTCCTGGCAGGAGAGCCCCCAGTGAACTCCTGCCTCTCTCAGGCCTACAGCCATCCCTCCCCAAGCCCTGCAGGTAGCAGGACAGTGACAGTGACACTGGCTAAGACACAACCCCATACACAACTGGAGCCCTGAGGGCAGAAACTGGACTCACGTTAGACATACCCAGGAGGACACACACACAAACACAGACACACACACCATGGAGTGGGGTGAGGGTAGGGGCTCACAAAGCCTTACACAGGGTGAGGGGTTGGTGGGAGGGTCGGCACATGCAGGCTCCATCTGCTCGCCGTCAGCCTCTAATCTAACCTGTAACCCAGCTGGTCCTCTGTCTCTAAAGCTGAATGTCAAACAGTGCCAAATGCTGTGGCAAAGGGGGAAGATCCCTCTGTCCCAACTTTGCCGCCAGTGTCCCCTAAATGCCCGTGACCCTGCCAGGTGCTCATTGTAACCATTTCTCACTAGTGTCAGGCCCCCAGGGGGACCACATGCCACTGCCTGCACCCCTCAGCAGAGGAACTGTCACCAGACATCGCCCTTTGCCTTAGCGGCGGTGACTTGATCACTCCTAGCTGGATCATCCCACCCCCAATCTGGCCCTTACACACTCAGGCCTATCTCTTTCCCTCTCACACACACACACTCCCTGGCCAAACTGCTCCTCCCTGAACACACACTTGCACATATGCACACACACATACACACTCTGTGCACACACAGGCTGGGCCTGAGAACATCTCTTCACACCGTTCATTCTGGTCATTTCCCCCAAAGGCATCCCAGCCTGGGGACTATTGGGGTACTGAAGGCAGGGGGATGTGGCCATGGGGCTCAGATGGACTGGGAGGAGGGGGGAGGGTGATGCATTAATTAATGGCTCCGTTAATTAATGTCACGTTGCTTGTCGCTTTCTCAGTGTGTGTGTGTATGTATGGTCCATGCCTGCTGCTGGTGCCAGGGTGGGCACCCATGCTGTACACCCAGCCTAGACGCCAGCCATGTCTTGTGGGGGCGTGTGTGTAACTGTAGTGTAGTCAGGTGCTCAATGGAGAATATAAAAATAAAAAAGAATCAAACATATACAGAAAAATTAATATATATTTTAAGTTTAAAAAACAGAAAAGCAGACAAAACAATCCCCATCAGGTAGTTGTCCAACCCCCAGCTGGGTCTGATCCTTCTCATCACCCACCTGACCTGGCTGTCCCCTCACCTCGGGCTCGGGGGATCTGTGGGGGACTGGGGGGCCATTTCCTTTTATCTGCCCTTTTTTTTGGTTGTTCTATTTTGTACAGACAAGTTGGAAAAACAACAGCGACAAAAAAGTCAAGAAACTTTGTAAAATACTGTGTGTGTGATTCCTTGTAAAATATTTTCAAATGGTTTATTACAGAAGATCAGTTATTAAATAATGTTCATATTTTCACTTCAAATGGTTCCCATACACTGTGTCTGCCTGGAGTGAGGATTGGGTGGCTTGAAGATAGGTGGCCCTGACCACTTACCACTCAGTTGGGAGCGAAGCCATACCAATCCAGGTCTCTGGTGGGTGGAAGGCATGATGCTTCCCAGGTCTCCTAAGTGCCAGATCCTTGACATCCTTTGTCTTCTATAATCATCTCAAAAGCCTTCAGGAAAAACTGTCTTAAAAGTTTCCCAGAGGCTCAAGGCCAAGACCATGGAAGAAAGAAGATGGAGATGAGATGCAAGCTTCTGGCCAATGGGATCAGACCAGGGCCTAGTGAGGAGGTCCTCCACGTGGAATGAAGAGTGAATACCCGGTCCAAGTTCATGACCTGGTGCTGGAGGGCCACTATTGCTGTCTGGAGGAGGCCAAGTTCTGCCCGCCCCCTGCAAGCATTATGGCGGCTCCTTCCCAGCCCAGGGGAGGCCTGGGCCTCTCTGGCCACTGCTGCTCACACTGGAACACAACTCTGAATCCTTTTCACCAAATCCTCTCAGGCCTCCCTCTGGCAAGCCCTACACCCTTGTCCATTTTAATCCTAACTCTTAAT EMBV3_30113 GTCTACACAGGCTTGTGTGCAAGCACTCACAGTGGCTTTATCCATAATAGCCCCAAATGG Gene BVV0102_035019 + 0 NULL GK000019.2:43250837-43258821 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38120 AGACCTTGCATAAATCAGCCTCTACCTGGCATCATCCCATCTTCATTCCCTACCTCCCAG Gene BVV0102_141790 + 1 EMBV3_34021 GK000019.2:28161367-28184865 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093124 1 XLOC_057085 Coding TCONS_00093124 XLOC_057085 Coding Coding CYB5D1 19:28159799-28163854 j TSS69943 3418 1 TCONS_00093124_1 153 0.251316559391457 3 0.157622101628022 4.9142388274494e-05 1.76391504644036e-05 3.79040951166692e-05 1.21476786450767e-05 1.77076808305656e-06 1.46514697547318e-05 6.56055496819415e-05 0.000235547497593467 8.5309657145975e-06 0.000197418907961675 8.46904330851639e-05 2.61533307327119e-05 0.000122561479460118 0.000260109229905494 5.8119454613715e-05 0.00131374802748218 0.000143068233652322 7.7668908959171e-05 0.000175995095402249 0.000244495184851197 5.45772226190322e-06 0.000279420085729221 0.000289875294311507 0.00036461350901922 0.000336528080811665 0.000146351216907804 0.000238273809406465 0.000152590044956472 0.000106522935194809 0.000283198219226227 XM_005220332.1 CYB5D1 PREDICTED: Bos taurus cytochrome b5 domain containing 1 (CYB5D1), 0.0 5451 100.00 0.883850204798128 NM_144607.4 CYB5D1 Homo sapiens cytochrome b5 domain containing 1 (CYB5D1), mRNA. 0.0 913 80.48 0.294324166179052 TCONS_00093124_1 sp|Q6P9G0|CB5D1_HUMAN CB5D1_HUMAN Cytochrome b5 domain-containing protein 1; 3e-47 157 82.02 0.57516339869281 1 coding 0 0 0 0 0.105581716490893 0.369357993370143 -0.0244418845321148 0.6939743231055 ATGCCAAGCCGGGGCCTAGTGGCCGGGCCAAACTTTGAGTATTTTCAACGTCGCTATTTCACGCCGGCCGAGGTGGCCCAACATAACCAGCCGGAAGACCTCTGGGTGTCTTACCTGGGAAACGTGTACAACCTAACCCCGTTGGCACAGGAGTACAAGGGAGACTTGCTGTTGAAACCCATCGTGGAAGTGGCGGGCCAGGATATCAGCCACTGGTTTGATCCGAAAACCAGAGACGTGAGTTCTTCTGGAAACGGGCTGAAGGGAGGAGGCGCTGGAGGGTTGAAGAGGAAAAATAGAGGCCAACCAGAGCCCGAGATAGTGACTGCTCCCACCGTCCTCCTCTGCTTTAAAGATCCGCAAGCACATAGATCCGCTGACCGGTTCCCTGAGATACCGCACCCCCCGGGGCCGCTTTCTGCACGTGCCGCCTCAGCTACCCCGTTCGGACTGGGCCAATGATTTCGGGACGCCTTGGTGGCAAGGGTCGCGTTATGAGGTGGGGCGGCTGTCCTCCAAGACCCGGAATATCCGCATCATTAACACGCTCACGTCGCAAGAGCACACACTGGAGGTGGGGGCCCTGGAATCGATGTGGGAAATACTACACCGCTATCTCCCCTATAATGCACATGCTGCCAGCTACACGTGGAAATATGATGGCAAGAATCTGAACATGGATTATACTCTGGAGGAGAATGGGATCCAGGATCAGCAGGAAGAATTTGATTATCTCAATATGGACAGTACACTTTACACACCTGCAGTACTGCTGTACTTCAATGATGACCTCACAGAACTATAGGATGGGAGGTGTATGCTCCTGTAGACTCAAGACAGATTTGGAATTTAGCGCTTTCTGTGCCCTGGAGGAAAAGAGGTGGGGATGGGGAGGGGCCATGCCTGGACCTAGACCTTCTTTCCACTCTGGGAGCTGGCATGAGGTTCCCATGCCCTACTGAAGTGTAAAGATCCTGTTCCTCAGGTTCATTAGCATTTACTCTGAGAAAGCTAGGGAGAATGCTAGAAGTGGATTCATTTTTAGGAATGATACAAGAAAATAAAGTATCTTAGATCAGGGAGATGTAGAAGAAATAAAGTATCTTAGCTCAGGCAGAACTTTTCCATAGTAAGAGAAAGAGAAGTTCTACACAGGGATGAGGGATGGAAGAACTTTTCTGGCAATGATGGAAATGGCATGGCTGCAGAAAGATGGAATTTACAAAGACAGGAAGAGGAGATGTCTGCCACTGGCCACACAAAACTGGTTAGTCTTTCTTCTGAATAGTATTTGCAGCTGAAACCGAAGAGGAAGAGGGGAAGTGAATGGTCACCAGGTAATTCAGGCCAAATATTATGCTATATATGCTCATTTAATATAACTACCCATAAGACAGATATCATTCCCACCGTTCTACAGATAAATCTTCTGAAGCTTAGCAAGAAGCTTAATTGCACAGAAGGTACACTAGTTCGCAACCAGAATGTAAATGCAGGTCTTCCCAATTCCAAAGTCCATTTTCTTTTCAATAGGAAGAGAATATGTCAGTGTCCCAGCTTACTGCATAATGGGAACCTATAGGCCTATTGTGTAGTCAGCCATGGTGTGGTTTTTTTGTTTGTTGGAGTTATTACCTCTGGAAGGGAGTTAGCAGAGTTCTCCTGTGGCAGAGAGGACACAGGGAAGGCTAAGTGTCAGCTAAATAACAGCTGTTGAGGCTACTTCATGGTTAAACCCACAGCAAACCTTTCCTGACTCTTCTGAGGCACAGAGGTGGGTATACACTGACTCCAGGAAAACGAGAATGGGAAAGGGCCACTGGATAGGCCACTTTGGATGCGGTACAAAAAGGAAGCATCAGCATGTATATATTCATGATGGGTCTGTGCCTCTGACAGGAAGGTGAGGAAGATGGGGTTGGCCTTGCCAGATGGTGACTCTGCAAGAAGGGGCTTGACAGGGGTGATGCAAAGAGAGAAGCTAAGTCAACTAAGCTAAGTTCTCAAAAGAGAACCATGGAGGGCAGGGGCCAGATTTAGTCCGCTGTGACCTAAGCATGGAAGGGGAAATGAGAATAACAAGTGAATTTCTTGACAGTTTCAGGCAAAAAAGGAAGCAGGGAGATGTTAGTGCATCTTCCTGGAAGATGGCCCCCTAGGAGACAGTGGGTGGGCTACACAGGAGCATGCTGAGGGGCTGATTAAGAACAGCACGGATAGAGGTGGGGACATCTGTGTCCACCTTTGGCTTCAGCAGTGTCTGAATTCACTGTGAGACAGCTTCCATTCAGTCCCATGTAATGACAGAATCCATGAATTATCTGAATCATTTTGATGTTTCATCAGCTCTGCAGCTGTTTCATGTATATCTTGTTTGCTCAGTTCTATTTGAGAACCAAAACTATGCTGTTGCTCTAGCCTTGGCCTTAGGGCCTGTGCCTATGGGATCTGCCCAGACTTGCCCCTCTGCCCAAATTTCCTACTTCAGTACCTTTTGCCAGACACACATCTCTGTCCTCACACACAGTCACTCTCCAAGCAGATTATATCACCTAAATATCTCTGGGATCCATCTGCTTTTCTCAAAGCTGTCATTACTTCTGGTCTGGAATGCTTCCTAACCAGTCCTCCCATATCCACTTCTGTCCTCCCTGGTGGCTCAGTGGTAAAGAATCCACCTGCCAATGCAGGAGATGCAGATCGATTCCTGGATTAGGAAGATCCTCTGAAGAAGAAAATAGCATCCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGACAGGCTGCAGTCCATGCGGTTGCAAAGAGTCGGACACGACTTAGTGACTAAACAACAGCCTCCACACAGAGCAGAGTGAGCTCTGGAAGACAAACCTAAACATCTAACTTTCCTCCTGCAGATATCTCAGGGGCTTCCAGTTACTTCTGGAATAAAATCCTAAATCCAAAGACCTTGCATAAATCAGCCTCTACCTGGCATCATCCCATCTTCATTCCCTACCTCCCAGTCACACTGGCTGGCTTTCTGTTTACTAAACGCCTTTCTGCCTCAGAGCCAGCACACAAGCTGTTCTCCCTGCTTGTGACACTCTTCCATTTCCCACCTTGCTAAAAGTGTTTCTTCCTCACAGCAACCTTGTCTGATTTCTCCATGTAGGTCAAGACTTTCTGTTAAATCTTCTCTTAGCACCAGGCCTATTTCAGAGTGCTTATTACAATAGTAATGTTAACATTATGGATGTAATTGGCTGGCTGGCTGCTAGATTGTAAGCTCACAAGAGCAGATAGCATGTCCATCTTGTTCACTACTGTATTCCCAGTGTTGGGCACACAGTTGCTGCGCAATAAATTTTGATGAATGAACTCAAATGTTAAGTGAATTCCTCTGCCTGTAATAACTAGTG EMBV3_36007 CCTACGTGCTGTGGTGACTCCTACTCCTCTGGTCCTGATGCAACTTGAAATGTGGCTCAA Gene BVT0102_330014 + 0 NULL GK000008.2:1865210-2286179 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224234 TCONS_00224231 TCONS_00224233 TCONS_00224236 TCONS_00224238 TCONS_00224232 TCONS_00224235 1 XLOC_137482 Coding TCONS_00224234 XLOC_137482 NonCoding Coding - 8:1919824-1978271 - TSS168200 583 2 TCONS_00224234_2 46 5 0.990110529377545 1.43970066950329e-11 6.55517093701287e-63 4.47262523433074e-12 1.48962555854627e-05 4.16111769538042e-36 0 2.48566512907999e-09 2.88456919969401e-05 0.000442531089595515 0 0 0 0.000165699251893067 1.5093034152905e-25 4.69645253920022e-05 1.17398199221625e-12 0.00239183046096579 0 1.4831959546949e-91 0 0 0 4.70585395411521e-05 2.84829949047411e-05 7.00118129958907e-14 6.56727411777997e-42 9.78085593651755e-05 8.08087861037595e-15 0 0 XR_231787.1 LOC101904351 PREDICTED: Bos taurus uncharacterized LOC101904351 (LOC101904351), 4e-123 444 100.00 0.420240137221269 0 noncoding 1 1 0 0 -0.0748666164796475 0.535506348149148 -0.000498752487069487 0.991470458700118 CCAGAGGTAAGGATCTCAGTTATTGTGAGTATTACAGGATGCAGAGCATTTGCAGAAGGCGATGAAAGAAAACACATGAAGGTGCTGTGGTGACTCCTACTCCTCTGGTCCTGATGCAACTTGAAATGTGGCTCAAAGGAAAGAAGAAACACCGCCTTTGGCACTTGGTGTCTGAAAATTTCTACAGAGAATTTCAACGTTTATACGCCATCATTTTGAGGGAACTGCAGAAATGGAGGAATTTCTAAAAAACCTCACCAGAGAAAGAATGAGATGTAGAAACTTGCCAAATCCAGCAAGCGTGAAGCAAACATTCAACAATACCCATGAAGACTCTTCTCACTCTCTCCTCCATGTCTTCTCAAAATACTAGGAAGATGCTGATGCCAAAGTTAGCAGACTAAGAGAAAAATGAATCCTGCAGCAGCTTTGTAATAAAAAAGCAGCACGGTGACAGCAGCTGAAAACTTGGCCTGCTTGAGCGATAGCATTATAACCACTTGTATCAGGGAGAGTCATTTCTGCTAATCTGTTCTTTTAAAAAAAAATCCTGACTTTTTGACATGATGCACATGTATATGAT TCONS_00226773 r 5' 54616 TCONS_00226773 r 5' 54616 EMBV3_34512 TGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTACCAGAGATTGCACGGATG Gene GeneID:100337248|LOC100337248:XM_002692374:265_cdna Constitutive 0 NULL GeneID:100337248 13 GENE LOC100337248 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_18847 CCTGGTCATCCTTGCTTTTCTCATCTCCTGTGTCCTGACCAACTGTGCCCATTTATGTTC Gene GeneID:512440|MGC152278:NM_001101956:2_cdna Constitutive 0 NULL GeneID:512440 21 GENE MGC152278 NULL similar to Myeloid-associated differentiation marker EMBV3_35065 GGGCTCAGAGGTGTACAGGATGCTTCGGGAGCCCGAATGCACGCGCTGCGGCCACGGCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29449 GCCCTGAGAGTGGGTATACTTGAGGGAGTACAAGCTGTTTCAACCTAGCCCTTTCCTGCA Gene GeneID:513641|NCKAP1L:NM_001143876:34_cdna Constitutive 0 NULL GeneID:513641 5 GENE NCKAP1L NULL NCK-associated protein 1-like EMBV3_11153 TTCCATTTCCTGTTTCTTCTGTGAGTAAAGGAGGTAGGAAGAGTAATTGGAATTGCTCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38011 CACACACTAGTTAGTGATGTTGAGACAGTCCCCTCAGACGTTAACGATCAGACTGTGTTC Gene GeneID:527883|KIF1A:XM_002686593:60_cdna Constitutive 0 NULL GeneID:527883 3 GENE KIF1A NULL kinesin family member 1A EMBV3_27478 GGAGAAGACTGCTGAAACATCTTTTGCCTTTGTTCTATGGTGGCTCCCACCTACAGACTC Gene GeneID:282113|UPK1B:NM_174482:32_cdna Constitutive 0 NULL GeneID:282113 1 GENE UPK1B MGC139202 uroplakin 1B EMBV3_32300 GGCAAAATTGGGAGATTCGTGGGCTTGTGTTACCTCATGTGCCTGAGTTTCTAAAGGGGC Control NULL NULL 0 EMBV3_26253 NULL NULL NULL NULL NULL NULL EMBV3_16103 GTGTGTGTGTGTGTGTGTGTGTGTGTATAAAAGTTCCTTTCGAATGCCATTATGTCATAA Gene GeneID:533574|ZFAND1:XM_002692835:198_cdna Constitutive 6 NULL GeneID:533574 14 GENE ZFAND1 NULL zinc finger, AN1-type domain 1 EMBV3_22458 GAGAACGGCCATGTTTGTGACTATATTCAACACTCCTATAGGAAGTCTGTTGATGGCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_33628 CACACCCTGTATATTCAAAGATGGCTGTGTGGGGCAACAAGTAGTGCTCTGGATGGCAGG Gene GeneID:783879|GSTM1:NM_001080354:217_cdna Constitutive 0 NULL GeneID:783879 3 GENE GSTM1 GSTM4 MGC151931 glutathione S-transferase mu 1 EMBV3_07880 CTGTGTTTGCCGTCTGCATCTTCCTCTTCTCCTTCATCATCCCCGTGCTCATCATCTCCA Gene GeneID:100296381|LOC100296381:XM_002692396:326_cdna Constitutive 0 NULL GeneID:100296381 13 GENE LOC100296381 NULL similar to opiate receptor-like 1 EMBV3_21186 TATCTCTTCAGGTGATTTCAAGGCCTGTTTGCTGAGGGGCATGAACCGAACATCATGACG Gene GeneID:338038|ATP6V0A2:NM_176637:36_cdna UTR3_Alt 2 NULL GeneID:338038 17 GENE ATP6V0A2 NULL ATPase, H+ transporting, lysosomal V0 subunit a2 EMBV3_31884 CTTCACAGCCCTGCTGGTCACCGGATTCCTGCTCCTCGTGCCGCTGCTCGTGCTTGCCCT Gene GeneID:507172|TMEM88:NM_001098378:478_cdna Constitutive 0 NULL GeneID:507172 19 GENE TMEM88 NULL transmembrane protein 88 EMBV3_35932 ACTACAGAGATGTCAGATGTTGAGCTTGTAGAGTCAAGAGAGGAGGTGGTAGGGAGCTGG Gene BVV0102_280224 + 0 NULL GK000015.2:53499416-53559421 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065059 1 XLOC_039783 NonCoding TCONS_00065059 XLOC_039783 NonCoding NonCoding - 15:53503974-53505275 - TSS48802 1301 1 TCONS_00065059_1 56 0.420445810914681 1 0 1.04578783787144e-05 7.72361396262234e-06 0 6.38290314814425e-06 0 0.000764355011707234 0 0 0 0 1.23169080878005e-05 0 0 0 0 0.00160377698152096 0 0.000462860497935076 0 0 0 5.70381406018146e-06 0 2.57719065640772e-05 0 8.12314141687226e-06 0 0 0 0 XR_237549.1 P2RY2 PREDICTED: Bos taurus purinergic receptor P2Y, G-protein coupled, 2 (P2RY2), transcript variant X2, misc_RNA. 0.0 2347 100.00 0.999231360491929 NM_002564.3 P2RY2 Homo sapiens purinergic receptor P2Y, G-protein coupled, 2 (P2RY2), 1e-82 311 75.19 0.384319754035357 0 noncoding 0 0 0 0 -0.0959535814985379 0.406223479386885 0.0350362452990183 0.689312033394638 GGGGTGTATCTTGGCTTCTGACCTGGGAGCTCCCCATTCACTCTTCAGGGAAAGGAAGAGGTCGGGGGACACAGGGAAGCTGAGGCGGGAAGAGCAGGGTTCTGCCCCAGTTCAGCCACCATCAGCTCTGTGATTGCAAACTCAGTTTCTTCATCTGTAAAATGGAACTGATCGTACTTCCTTTCCAAGTTTACTGAACAGTGAGCGTGCGGTAAGGCACAAACACGCAACTTTTACTTTCCTCACATCGATGCTGTCTGCTCAGTAATGTCTAATTTCCCTTTCCATCCATGAACTGCATATTTGGCAGACTCCAAAACTTTGAGTCACTCTTGGGTAACAACTCAAGTTCAGTCCAGTTTAAAGTTCCAGTTGCCTACTGAATTTACTGCTCCCTCCTCCTCTCCCCCAGCTCTGGCAGGACCCTGCTCCCTGTCCTTGGGGTGCCCCTCTTCTCTGGGTGTGGGGCAAGATGAGGAGGAAAGGGGCCAGTGGATCATCTCCAGGACTGCCCCAGCCCTCTCTTGCTGTCCTTGCTTCTCTGGCCCTGACAACCTGACATCAGTGCTGCTCTGCACAGAGTCCCCACAAACACCAAACCACATATTTTTTTGCCAGACTCCTTTTAAAAAATATTTATTTACTTAAATTGGAGGATAATTACTTTACAATATTGTGATGGCTTTTGCCATACATCAACATGAATCGGCCATAGGTCTACATGTGTCCCCCATCCTGAACTCCCTTCCACCTCCCTCCCCACCCCATCCCTCCAGGTTGTCTCAGAGCACTGGCCCTGGGTGCCCTGCCTCATGCATTGAACTCTCACTGCAGACCACACTTTTGTAAGAGTCTCTTCATTCAACTATCCCAGAGTGACCAATTTGTGCCCCATCTCTCCTGCTGAGAGTCTGAACTGATACACCCCAGACTCCCTCAGTGATTTCCCTAGAGCATCTTTCACCTGGCCTGAGGGTGGGAAAGCCCTTGTCCAGCCCCCTCCCCACTCCCACTCTGTTGTGAATTCACAACTACAGAGATGTCAGATGTTGAGCTTGTAGAGTCAAGAGAGGAGGTGGTAGGGAGCTGGGGTAGTAAACTGAAAAGGTATCTAACCCCAGTTGTTTCTAGGTTTCTTTAGTAGATGGGTATTCTACCCCTCTGTGTCCTCAGATTTATGTCCTGGAGCCAAATTCCAAATCAGCAGCCACATGAAAAGTCCCTCTTCATTGTGGGATTAAGCTGTTAGGCCAGCCTTTGTGACCAAATCAATTGCAAAATGTGGGGGAGGAAATTAAAAG TCONS_00059567 TCONS_00059568 TCONS_00059569 . 3' 3635 TCONS_00059567 TCONS_00059568 TCONS_00059569 . 3' 4935 EMBV3_10787 CGCACATCCACGTGGACGGCGCCCCGGGAGGCACTGCTGACTTCGGAGGACGCAGTCCTG Variant GeneID:319141|GCAT:NM_001075134:16_cdna 201^433 4 EMBV3_12467 GeneID:319141 5 GENE GCAT NULL glycine C-acetyltransferase EMBV3_42542 CGCTGGTTTCTGTACCCTCCTGAGAAGACACCCGAATTCCACCCTAACAAAACCACACTG Gene GeneID:100139040|JMJD8:XM_002697969:700_cdna Constitutive 1 NULL GeneID:100139040 25 GENE JMJD8 NULL jumonji domain containing 8 EMBV3_40429 GAGGCAGAGACCCGTGCTGAGTTTGCTGAGAGATCGGTAGCCAAGCTGGAAAAGACAATT Gene GeneID:497019|TPM3:NM_001011674:61_cdna Constitutive 0 NULL GeneID:497019 3 GENE TPM3 NULL tropomyosin 3 EMBV3_00074 AGCAGCTCAAGTTCTCTTGAATCCGAGGTCCCAAGCCTTACTACCCAGCAAGTTTGGCAT Gene GeneID:787130|LOC787130:XM_002700111:258_cdna Constitutive 0 NULL GeneID:787130 X GENE LOC787130 NULL similar to collagen, type III, alpha 1 EMBV3_07357 TGCGTGCTGATAAGAAGCTCTCCAAGATCGAGACCCTCACACTGGCCAAGAACTACATCA Gene GeneID:512290|LMTK2:XR_084072:580_cdna Constitutive 0 NULL GeneID:512290 25 PSEUDO LMTK2 NULL similar to lemur tyrosine kinase 2 EMBV3_27326 TATAGCTACTTGGGTCTTAGAAGCTGGCCCTTTGGTGCAGAGCACTGTTTCCCACTGGCT Gene GeneID:523344|ERAL1:NM_001099022:127_cdna Constitutive 1 NULL GeneID:523344 19 GENE ERAL1 MGC157415 Era G-protein-like 1 (E. coli) EMBV3_09644 GTGCTTGTGTTACTTATGAAAAGCCCCTACCCCAAGGTCTTCCGCATGGCAGCGATCATG Gene GeneID:540335|GLO1:NM_001083496:15_cdna Constitutive 1 NULL GeneID:540335 23 GENE GLO1 MGC139859 glyoxalase I EMBV3_37561 TATTCCTATGAAGGTGATGAGTATGGTGACACCGAGCTGGACTTCTCCGTGGTCTGGGAT Gene BVT0102_046679 - 1 EMBV3_33029 GK000030.2:40443783-40458246 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246884 TCONS_00246885 1 XLOC_151147 Coding TCONS_00246884 XLOC_151147 Coding Coding - X:40446342-40450051 - TSS184998 2058 1 TCONS_00246884_6 676 14 0.448759439050701 0.000238859160397263 0 6.01314460221246e-05 1.61401670511259e-05 0 8.99430088664483e-05 9.72169412716933e-12 9.1465318365941e-12 2.06424679449508e-05 4.41626258392473e-05 0 2.35280155574995e-06 3.76090955967651e-06 6.06754740069593e-06 7.42099071470749e-12 0.000564679001225326 0 0 6.94382108599231e-05 0.000366909438373768 8.18315694915591e-05 0 4.45774138401557e-05 4.88766236959191e-05 0.000464586650014428 3.4233818360298e-05 0.00044128528458207 0 0 3.8998557006307e-12 XM_003582046.2 LOC100851717 PREDICTED: Bos taurus plexin-A1-like (LOC100851717), mRNA. 4e-174 616 67.30 0.999514091350826 XM_005274706.1 PLXNA3 PREDICTED: Homo sapiens plexin A3 (PLXNA3), transcript variant X2, 0.0 2585 87.85 0.999514091350826 TCONS_00246884_6 sp|P70208|PLXA3_MOUSE PLXA3_MOUSE Plexin-A3; 0.0 1300 92.60 0.998520710059172 2 coding 0 0 0 0 0.00803086190614924 0.93995408293944 0.0158470825705491 0.770458022274345 TTTTACAACTGCAGTGTCCTCCAGTCGTGCATGTCCTGCGTCAGCAGCCCTTACCCCTGCCAGTGGTGTAAGTACCGCCACGTGTGTACCAGCCAGCCCCATGACTGTTCCTTCCAGGAAGGCAGGGTGCGCAACCCTGAGGGCTGCCCTGAGATCCTGCCCAGCGGGGACCTCCTGATCCCGGTAGGCGTTGTGCAGCCCCTCACCCTGCGGGCCAAGAACCTGCCACAGCCTCAGTCAGGGCAGAAGAACTACGAGTGCGTGGTCCGGGTTCAGGGCCGGCATCAGCGGGTGCCTGCCGTGCGCTTCAACAGCAGCAGCGTGCAGTGTCAGAACGCCTCGTATTCCTATGAAGGTGATGAGTATGGTGACACCGAGCTGGACTTCTCCGTGGTCTGGGATGGCGATTTCCCCATCGACAAGCCTGCTACCTTCCGAGCCCTCTTGTACAAGTGCTGGGCGCAGCGGCCCAGCTGTGGCCTCTGCCTCAAGGCTGACCCCCGCTTCAACTGTGGCTGGTGCATCTCGGAGCACAGGTGCCAGCTGCGGGCCCACTGCCCAGCCCCCAAGACAAACTGGATGCACCCGAACCAGAAGGGCGCTCGCTGCAGCCATCCTCGCATTGCCCAGATCCACCCAGTCATGGGGCCCAAGGAGGGGGGCACCTGGATCACCATCGTGGGTGAGAACCTGGGCCTCACCTCCCGAGAGGTGGGCCTGCGGGTGGCTGGCGTGCGCTGCAACTCCATCCCCGCTGAGTATATCAGTGCTGAGAGGATCGTCTGTGAGATGGAAGAGTCACTGGTACCCAGCCCTCCACCAGGGCCTGCAGAGCTCTGTGTCGGCGACTGTTCGGCTGACTTCCGCACGCAGTCTGAGCAGCTCTACACCTTTGTGACGCCTACGTTTGACCGTGTGAGTCCCAGTCGGGGCCCGGCCTCCGGGGGCACGAGGCTCACCATCTCTGGAAGGGCTCTGGACGCCGGCAGCAGGGTCATGGTGACCGTGAGAGATGGCGAGTGCCAGTTCGTCAGGAGGGATGCTGAAGCCATCGTGTGCATCTCGCCTGTCTCCACCCTGGGCCCGAGCCAAGCCCCCATCATGCTGGCCATTGACCGCGCGAACATCTCCAGTCCTGGTGTTGTCTACACTTACACCCAGGACCCCACTGTCACACGCCTCGAGCCCATGTGGAGCATCATCAATGGAAGCACTGCCATTACCGTGAGTGGGACCCACTTGCTGACGGTCCAGGAGCCCCGGGTCCGGGCGAAGTACCGAGGCATTGAGACCACCAATACATGCCAGGTGATCAATGACACTGCCATGCTGTGTAAAGCCCCTGGCATCTTCCTGGGGCAGCCCCAGCCACAGGCCCAGGGCGAGCACCCAGATGAGTTTGGCTTCCTGCTGGACCACGTGCAGACTGCCCGCTCCCTCAACCGGTCCTCCTTCACCTACTACCCTGACCCCAGCTTTGAGCCTCTTGGGCCCTCTGGGGTCCTGGACATCAAACCAGGCTCCCACGTAGTGCTAAAGGGCAAGAATCTGATCCCCGTGGCAGCTGGCAGCTCCCGCCTCAACTACACGGTACTGATAGGGGGCCAGCCATGCGCGCTAACCGTCTCCGACACGCAACTTCTCTGCGACTCCCCCAGCCAGACGGGCCGGCAGCCTGTCATGGTGCTGGTGGGTGGTCTGGAGTTCTGGCTGGGCACCCTGCACATCACAGCCGAGCGTGCCCTGACCCTGCCAGCCGTGGTGGGGCTGGCGGTAGGGGGCAGCCTCCTGCTGCTGGCCATCACTGCCGTGTTGGTTGCCTACAAACGTAAGACTCAGGATGCCGACCGCACGCTTAAGCGGCTCCAGTTCCAGATGGACAATTTGGAGTCCCGGGTGGCCCTGGAGTGCAAGGAAGCCTTCGCTGAGCTGCAGACAGATATCAATGAGTTGACGAACCACATGGACGGCGTGCAGATCCCTTTCCTAGACTACCGGACCTATGCTGTGCGAGTGCTCTTCCCAGGGATCGAGGCCCACCCAGTGCTTAAGGAGCTG TCONS_00246882 s 5' 2357 TCONS_00246882 s 5' 2496 EMBV3_02358 ATGGTCTTCATTTGTTGAGGGGAAGCCACTTAATCAGGAGTCAGACCTAGTGGGGGAGAG Gene GeneID:100125305|ACTR1B:NM_001103338:2_cdna Constitutive 0 NULL GeneID:100125305 11 GENE ACTR1B MGC139536 ARP1 actin-related protein 1 homolog B, centractin beta (yeast) EMBV3_12259 AAAGCATGGTTGACGTGGCACTTCTTTGACACTGCTCCTTCATTGTCTCCAGGAATTTCC Gene BVT0101_009706 - 0 NULL GK000001.2:157261756-158171125 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005807 TCONS_00005808 1 XLOC_001372 NonCoding TCONS_00005807 XLOC_001372 NonCoding NonCoding - 1:157908365-157925816 - TSS2885 1369 2 TCONS_00005807_2 62 0.745799853907962 3 0.921719197707736 0 8.65008129561281e-11 0 0 0 0 0 0 0 5.09529229731046e-05 9.70758969503921e-05 2.60844475199138e-06 1.13298434324335e-10 0.000288609776932395 0 0.000173629621436581 0.000157640396378483 0 0 1.57525160678181e-05 0 0.000145827148923431 0.000268043990722146 0.000493838665624874 0 0 0 8.95425483813987e-05 1.21182554779032e-08 3.51282239769769e-05 XM_868287.6 LOC616298 PREDICTED: Bos taurus chromosome unknown open reading frame, human CXHXorf38 (LOC616298), mRNA. 3e-54 217 84.85 0.140978816654492 0 noncoding CTGTGGGACTGCCGAGAGAGGGCTCAAAGACAAACGCCTGCCTTAAACACTGAGACAGAGGTTTGACCCCTCCACACTTAGACTCTGATTGGCTGGAACTGACACAAATGTAACGGCCTGCACGAGACCTTCTGCTCAGCCAGGTGCGGTCACGTGTGGTCAGTACAACCCAGACTGTAGCCGTCTCATGGACGAAAAGATGGATGTCTCAAGGAAGAACACACAGCTAATTCATGACAGAATGAGACTTAAGAAAATATGATACAATTGATGACATTTGGACAGCCACCTTCAACCAAACAACAGTTACTATGCAGCTGCCACTGTTTCTATAGGCATCATCTTTTTTTGTTGTTACTCCTGGTGAATAACTGAAGAACTGAAATCCTTTGAATGTTTAGCCAACAATCTCTAAATTAAGGGCCATTTTAAAAAAGAATGGGCTTCCTGGGCTGCTCAAATGGTAAAGAATCTGCCTGCAGTTTCGGAGACCTGGGTTTGATCCCTGGGTTGGGAAGACCCCATGGAGAAGGGCATGGCAGCCCACTCCAGTATTCTCCAGAGAATCCCACGGATAAAGCAGCCTGGAGGACTACAGTCCATGGGGTCGCAGAGAGTCGGACATGACTGAGCAAATTTCATCTCACTTAAAGAAAACAAGACTTTCCGCTGCTTGAAATTTTTCCATGGGACATCTTCTGGTAAAATCAAGAGAGTATCCTTAAGAAAACTCTCACCAGGGGTGTCAGCAGCTTGGAGGAAATTCCTGGAGACAATGAAGGAGCAGTGTCAAAGAAGTGCCGCGTCAACCATGCTTTTAATAGCACCAGCAAGAATACTGAGTGGAAAAACAGAGATGAACACTAACTCAGGTATTACACTGCGTAGCGAGATTTTAAGAATACCAAACCCCATTATTTCACTTACATTTCCTTTATATGTGTGCTCAGAATGATAAATGATAAAAAAAAAATCTATGGCAAAATAACTGAAAAAGCTTTTTCAGTAATTATAAGACAATAATGCTAAGTGATAAGAAAGAATTGTGCTATGGGTTAATTAGCCACCATTTTTTCTTTCTCACAGAAACAAAAAAATATTCGTTCATCTCACATTCAGTAGTGTCTTAGAAACAAGGAAAGGTATTTAGTAACTCATTTGATCCTCAGACGTGCTGTAAGAGGGGTGTTACTCCTCTCGTTTTCCAGATGAAGTGTGGAGGTGTGGACCTAACTTGCCGGAGGTTCCATGTTTAGTAAGTGATGGAGGTTGGATTTGAAGCAAGGTAATTAATGTAACTCTGGGGCACAAGCCTAATCTTGGATCAATCTGTCCTCTGGACAAGATTTGTTAACTTTAAACATTGACT TCONS_00002806 r 5' 261644 TCONS_00002806 r 5' 245310 EMBV3_02332 GCATTTTCTTGGTGTTTGAAAAAGAATTGGTGTTGTGGGGGAGAATTCCAGGTGCCTTAC Gene GeneID:535869|RNF128:NM_001076071:5_cdna UTR3_Alt 2 NULL GeneID:535869 X GENE RNF128 MGC137489 ring finger protein 128 EMBV3_08661 CCATCAAGGGAAGAATAACTTCACTGAATTTTATTTTTTTGTGAAAGAACCTTTATTAAA Gene GeneID:539521|GNAI3:NM_001034677:164_cdna Constitutive 2 NULL GeneID:539521 3 GENE GNAI3 MGC127972 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 EMBV3_24729 TAGGTTCTAGGAAGTCCAGTTTTCATTTGCCCAGCTGTGTAGCACCTGCATTGCCCAGTC Gene GeneID:532236|INA:NM_001075958:174_cdna UTR3_Alt 2 NULL GeneID:532236 26 GENE INA MGC142838 internexin neuronal intermediate filament protein, alpha EMBV3_07448 CAAATTTTCAATGAAAGCCAGTACCGTGGGGAAGCAGAAGCTCAGGCAAAGCAGCAAGCA Variant GeneID:614007|SH3BGRL:NM_001035440:132_cdna 258^338 2 EMBV3_12722 GeneID:614007 X GENE SH3BGRL MGC128272 SH3 domain binding glutamic acid-rich protein like EMBV3_22397 ATGCCCTTGGTCCCATGGATTCCCTCACTCATGGGAAGGAGGACTGTTGGAAGAGAACCA Gene BVV0102_334144 + 0 NULL GK000002.2:53764907-53844154 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00109434 1 XLOC_065338 NonCoding TCONS_00109434 XLOC_065338 NonCoding NonCoding - 2:53793923-53794203 - TSS81055 280 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.27645227950363e-05 0.000808296168377192 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0578382515580656 0.624568472441864 0.0821109321435488 0.127707482569998 AAGTTGATGACCTAATTTATTTCAGATATAGGGGTCATTTCAGCCTTACTGAAAGATGAATATACTGACCATTCACATAATAATACAAATGGCCTTAATTTGCTTCTTCCCTTGCATGTGACTGAGAGTAGAGGATCCCCTACCTTGGGATGAGATACACGTTTCAGAGGTCCATGCTCTGGTTCTCTTCCAACAGTCCTCCTTCCCATGAGTGAGGGAATCCATGGGACCAAGGGCATGTGTCCCACTTGAACCAGTGTCTCTGAACCCTTAGGTATCT TCONS_00105335 . 5' 28942 TCONS_00105335 . 5' 28942 EMBV3_09451 AAGTCTAAACATTCAAAGCAAGATGAATTGGCCAAAACAACCTTCAAAATATTTCAGATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03380 CCCTCAGCTTATAGGAATCGTATCTTGGTCAACACGTTCCAATGTTCAAGAAGGGAGATC Gene GeneID:512734|STAM:NM_001076842:97_cdna Constitutive 0 NULL GeneID:512734 13 GENE STAM MGC142699 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 EMBV3_20515 GCTAAGTCCTAACCACTGGGCCACCAGGGGATTCCCAAGTTTGTCTCTGATAGTCCAAAA Gene BVV0102_313830 + 0 NULL GK000007.2:16423136-16465940 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38036 CTATGTTCTCTCCTCACCGTGTCTTCTCACAAGACTTTGAGGATCAAGCGATTCCTGGCC Gene GeneID:100297075|LOC100297075:XM_002695599:162_cdna Constitutive 0 NULL GeneID:100297075 19 GENE LOC100297075 NULL similar to ribosomal protein L39 EMBV3_25759 CCTGCACTCCTGGCAACAGAGTCGGAGGGTTTTCATAGGATTGGTTTTCTTCTGCCTTTC Gene GeneID:510682|DDOST:NM_001101073:123_cdna Constitutive 0 NULL GeneID:510682 2 GENE DDOST NULL dolichyl-diphosphooligosaccharide-protein glycosyltransferase EMBV3_41609 CGTCATGTCCCAGGAGCACCTGCTGGGCGACGGGGGCCGGTCGCGCTACGAATTCACGCT Gene GeneID:789726|LOC789726:XM_002695384:232_cdna Constitutive 0 NULL GeneID:789726 18 GENE LOC789726 NULL hypothetical LOC789726 EMBV3_16438 AGTGCGGCTGGTGTTCCAAAGGAGTGGCTCCAGTGATGAAACTCAACATAGAAAGTGTCC Gene BVV0101_078465 + 0 NULL GK000015.2:51686841-51697478 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061643 TCONS_00059493 2 XLOC_037108 XLOC_036434 Coding TCONS_00059493 XLOC_036434 Coding Coding - 15:51569707-51572890 - TSS44642 3083 1 TCONS_00059493_2 194 2 0.0317410433689503 2.72142945934525e-05 0 0 0 4.32197791580608e-06 0 5.16814384845547e-06 4.23561936460898e-05 0.000501717667573518 0.000657304051449439 7.13663352739747e-05 0.000124645440889914 0.000912287912695542 0.00294143215372026 0.00530701086412596 0 0 0 0 0 0 0 0.000317404077985236 1.27752137753657e-20 0 0 0 6.10008358964148e-05 1.50976164644522e-05 2.92475096781977e-05 XM_005200456.1 LOC101908409 PREDICTED: Bos taurus putative RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like protein 1-like (LOC101908409), partial mRNA. 1e-138 499 95.79 0.0999026921829387 NM_014188.2 SSU72 Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) (SSU72), mRNA. 8e-84 316 72.03 0.192993837171586 TCONS_00059493_2 sp|A6NK39|S72L1_HUMAN S72L1_HUMAN Putative RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like protein 1; 5e-97 284 72.16 0.994845360824742 1 coding CTTGGAAGAGCTGGACCCAGTCGGTCATCCCCTGGCCTTCAGAGTTCCCTCAGCCCCTGAAGTCCAGGCATCTGGCTGGAGTCCCAAGTGGCCGCCACCATGCCCTCGTATCCGCTCAGTGTGGCTGTGGTCTGCATGAGCAACATGAACAGGAGCATGGAGGCCCACCGCATCCTCAGGAGGAAAGGATTCCGAGTCAGGTCCTTCGGAGCTGGATCTCGAGTCAGGCTCCCAGGAAGGGCACGCAACCTCCCCGTGGTTTACGATTTCTCCACCACCTATGAGGAGATGCGCAAGGACCTTGTGCGCAAAGACCGACAACGCTATAATAGCAACGGCATCTTACACATCCTGGGAAGAAACGAGAGAATCAAGCCTCGCCCGGAAAGATTTCAAGAGTGCCGAGATCGCTTTGACGTCATCTTCACCTGTGCGGAGAGTGTCTACGACAGGGTGGTGGAGGAGCTGTGGGTCCGAGAGCAGGAGACCTTCCAGCCTGTGCACGTGATCAACGTGGACATGGCTGACAACGCGGAGGACGCCACTCTTGGGTCTTTCATCATCTGTGAGCTCTGCGAACGCCTCCAGCAGGCAGACAACCTGGAGGACTCTCTGGTCCAGGTGCTCCTGGCAGCCGAGAGCAAAACTGGCAAGAGCTTTCTGCACACGGTCTGCTTCTACTGAGGATCTTGTCTGCTTTCAGCTCCTCTTGGTACACTCCAGCCTGGGAAGGAAGTGGAGAAGGAAATCTTTTTCTGCCAAAATAACATGAACACCCTGGAGGCATCAAACCTTTCCATGGTGGGGGACGATGGTATGGATTCTTGACCTGGAAGGAACACTTCAGGTCTCACAGGGCTCTGCGAGGAAGTTAACCTAGAGGACTCCATTATCCACATCAAGAGACCAAGATTTACAATGGACCAGTGATGTCTTGAAGGACATTCAGCGAAGAAGAACAAACAAATCCAACACCATTTCCATTCCATCATTTGTTTTTACTTCATCATTTTAATACAGTTTCCTTTTGTCGTTTTGGTATTATGCATCAGTATAAATGAATTTTTCTTTTTAGTGAGATATGATTATATTTAATGTTTGAACTTTAAAAATCTAATTTTAGATTGTATATATTTTGGTAAATGCAAGTTTCATAGAAACTCAGGCATTGATTGCTAAAATGTGAGCACAATCTGTTCAATTCAATATTAATGAAATGAAATAATAGTTTTCTAGTTTATAGAAAATGGATCTCCTAATTTTTGGTAGGGGTTGGATCTTGCAAAAGGAACACCTTGGTTTCTTACTGTTCAAGCTGAATGAATTCCACAGAGTAAAGCACTCTTTCCTCAAGCGGATTTTCTTCATGCATAAAAGTTTCATTGATTATTGAACTCCTCTAAACGTGGATTCTATGTGTAGGGAAGTGAATCATCTTGGGTCTGACCAGCAATGACACCTAGGCATGTGTAACTTACAGCAGAAATTAAAGGAAGGGGGAGTTGGCCTGGTTGAATGAGGTATCTTGCTATGTCAGAAGATTGATGTGGACTTTATTTACAGAGCAAAGGTAGGATGGAGCAAGAGTGTACCTGGAGGCAAGGGATGAGCTAGTAGAGGATTTCCCGAGGAGTGTGGATTGAGCAGTAAAGTGGATGCTCTGGACAGGGGGACAAGCTGTGGGATCATAGGAAGATGGTGGAGTTGAAGGATGGAACATGCTGAAGAGGAGAGAGAGAGAGGGAAGAATTTAGAAGCAATGTCAGTTTTCTGTCTTTCCACACTGGTGACAGGGTGTACTTATCCACATGGGGCAGTGCTGGCAGTAGGGAGGTGAGGGTTTCTTTCTGGGTAGATTCAATGAGCTTCAAGGTCAGTCTTTCATCTGATGTTGAGGTAAGTAGGGCAGGAATGGGAAAGGGATCCGATAGTGTGTTGAGATGATCATCTCCAATGATGGGAACACAAAATGCAAATAGGGAATGTTGGGGACCCTTTATAAGAGAGAGAAATGATCTGTCCAGGAGATCTTACTTTTGTCAGAACATTCACTGGAAGGAATTAAGAAAATATTTTTGGTTGATTTCCTGTCTGTAGGGGTATGGAGGAGGCAAATATGATAAAGCATGTAAAAGTGCGGCTGGTGTTCCGAAGGAGTGACTCCAGTGAGGAAACTCAACATAGAAAGTGTCCATGGAAAAGTTAAAGGGAATGGGACTGGATGAAATGGATGGTGGGACATGGTTTGTCTAAGAGTCCTTAGAGCTGAAAAAATAACAAAGATTTGAGGGTTGACAGTTGAAGGTTGATGAGTGTCCTGCTTCAGGTTTAGATGTACTGCAGAGATCTGGATGGATCTTGGGAAGTTGCTGTCTTGGGGGAAGGTGTAGACAAAAGCAGTTGGACAAATGTAACAACACTGAATATCTTTGATATTGAATGAGTGATCTTTGTGCTGGTTGGGTTTGCTATGAATGGGACCTGTTCTAGTGACTTCACATAAAGAATTGTCAAGAGAATAGGAACCCTCTCATGCCAACATGACATGCCAACCCTTCCAATGTGGGGAACGATGGTGTGGAACTGGACCTGGAAGGAAGGACTCAGTGTTCACAGGGTTCTGCAAGGAGGTTAATCTCGAGGACTCTCTTCTGGATGGACAATCAAAGCTGATCACAGAGCCCAGGACAAGCAATGCATTGAAGGATATTCTGAGAAAAAGGAACAGTTTCTATTTTATTGATCTATATGGATACTGATTTCCTTTTGTCCTTTTGGCATGGTGTCGATACGACGGGTTGTTTTTTCTTAAGTGGGATGGGAATACATTGAATGGAAATTATATTGAATTGGAAATATTTTTGCTTTTAGAGTGTTTGTCTTTGATGAATGCCTACTTTATTAGAAACTCAGGGTAGATCATGTGTGGCTTTTTTAGGGGAAAATCCAAGCATGATTTGTTTAATCAAATAGCTTATTTATGAAAGAAAATTAGAAATCGCTGTAACCCTGGTTGCATTTATTACTAAAATCGAAGCCCTATCTGTTGAACTATGTAGCTCATTTAAATAAACAAAATGAAA TCONS_00059491 s 3' 5114 TCONS_00059491 s 3' 5114 EMBV3_05673 TTCTGGCCGACAGGGTAGGTTTCTCTTGGGCAGGCAGAGAGCATAGACTGCAAAACTTCT Gene GeneID:280994|ALPL:NM_176858:15_cdna Constitutive 0 NULL GeneID:280994 2 GENE ALPL MGC139479 TNS-AP alkaline phosphatase, liver/bone/kidney EMBV3_30808 GTGTATAAAGACTGGCATCTTCTCCGGATATTGGTGTTTGAACTTAGCAGAGAAATTCTG Gene GeneID:533038|TM4SF1:NM_001075980:41_cdna Constitutive 2 NULL GeneID:533038 1 GENE TM4SF1 MGC139884 transmembrane 4 L six family member 1 EMBV3_40288 GTTACGTGACCTGGGTGTGATAAATGATGGTACCTCCTGTGGTAAGGAGCGGGTATGTTT Gene GeneID:789334|ADAM30:XM_002686117:141_cdna Constitutive 0 NULL GeneID:789334 3 GENE ADAM30 NULL ADAM metallopeptidase domain 30 EMBV3_20753 CTTCATCCAATTCTGTGACAACATATGAAACCTGCCAGACCTACGAACGCCCCATCGCCT Gene GeneID:529947|LOC529947:XM_002693059:359_cdna Constitutive 0 NULL GeneID:529947 15 GENE LOC529947 NULL similar to signal peptide, CUB domain, EGF-like 2 EMBV3_03963 CTGCAGAGTGGGCTGAATAAGGTGCAGTAGGTATATGGAGGCTGATAAAGGAGAAGGCCA Gene BVV0101_043180 + 0 NULL GK000018.2:2254144-2290825 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33778 CCTCTGCAGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCGACGACCTTATGAACCAA Gene GeneID:782752|GTF3C2:NM_001102329:264_cdna Constitutive 2 NULL GeneID:782752 11 GENE GTF3C2 MGC155253 general transcription factor IIIC, polypeptide 2, beta 110kDa EMBV3_07956 CAAAGTGGAGGATGTAATCCCAAGGCCAAGTTCTAGCCGTCATGCAGCGTTTCCTTACTC Gene BVV0102_081266 - 1 EMBV3_16139 GK000024.2:34585541-34760344 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39765 ATATCAAGATGGCAAGAACCGCCATTTGCAACCTCATTCTGGGAAATCCTCCATCAAAGG Gene GeneID:360193|PNO1:NM_183085:23_cdna Constitutive 2 NULL GeneID:360193 11 GENE PNO1 NULL partner of NOB1 homolog (S. cerevisiae) EMBV3_01761 CCAAAAGATTTGGTTATCATTGATGACAGAGTTTCGTCAGGTTTTTAGAAGGCTATTATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23243 TCAAGTGGAACCCTGAGACCCATGCTGCAACTCAAGAGGAGCACTGAGTTCCCATTGCAT Gene BVV0102_223740 + 0 NULL GK000015.2:1296404-1500369 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13185 CATCCTCATTGGGGAACTGGCACTGTGACCTTAGCGTTTAGTTTTCTAGAGGATGTGATC Gene GeneID:540224|RND3:NM_001099104:133_cdna Constitutive 2 NULL GeneID:540224 2 GENE RND3 MGC148524 Rho family GTPase 3 EMBV3_36615 CTCAGGTTTGGCCAAAGTTGTGGTGAGGGAACTTCCCTTCTCCCATTCTGGGGTTTCATT Gene BVV0101_018921 + 0 NULL GK000007.2:53483615-53483948 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213541 TCONS_00213544 TCONS_00217177 TCONS_00213543 2 XLOC_130476 XLOC_131441 Coding TCONS_00213544 XLOC_130476 Coding Coding WDR55 7:53480054-53484045 j TSS159949 1865 2 TCONS_00213544_2 161 0.0589812332439678 6 0.534085213032581 0.00348143725169953 0.00222474408579427 0.00483849858420265 0.00105040122291412 0.00247524849375829 0.00356645004233249 0.0020052827263349 0.00142050623338701 0.00336168664347847 0.00188425053151368 0.00127172875696706 0.000501445933511714 0.00163894767549072 0.00384332712509695 0.000581074862688929 0.00574544063949722 0.00392500102810943 0.00587344765884642 0.00472695121013431 0.00474729101337299 0.00392689333805693 0.00275424250801352 7.31029854266279e-06 0.00208497865581434 0.00323301138018149 0.000582731180300263 0.000896973968195217 0.000457357317201926 0.000271991421453038 0.000503420215530994 NM_001014873.1 WDR55 Bos taurus WD repeat domain 55 (WDR55), mRNA. 0.0 1544 99.88 0.46112600536193 NM_017706.4 WDR55 Homo sapiens WD repeat domain 55 (WDR55), mRNA. 0.0 688 86.71 0.30455764075067 TCONS_00213544_2 sp|Q58DT8|WDR55_BOVIN WDR55_BOVIN WD repeat-containing protein 55; 2e-84 257 94.03 0.826086956521739 1 coding 1 1 1 0 -0.436568603737529 0.138216374770419 0.0509308813762984 0.319323485312122 CCTCGCCCCACAGGAAAAATACCTTTTATGTTTTGTGTGGTGCACTTTGATATTTTCTGGTTTATTTTATCCTATTGTAATCGTGGGCATACAGAAAATACTGACTCACTAATGGGTCACGACTAGAGTTTGAAATACAGTGTTCTGGAGTGTATAATCTGTAGTCTGTTTAGTTCTCATTATGTCTGCTGCTTCTAGCCCAGGCTTTTCCTACTCCTGCCAAGAGGGAGAAACCAAGGAGCTCTGGTCCTCAGGTCACCACCTCAAGTCCTGTCGAGCCGTTGTCTTCTCTGAAGATGGGCAGAAACTTGTTACTGTCTCCAAGGACAAAGCCATCCATTTTCTAGATGTGGAGCTGGGCCGACTGGAAAGACGCATTTCCAAGGCTCATGGTGCCCCCATCAACAGTCTGCTGCTGGTGGATGAGAATGTTCTGGCCACTGGGGATGATACAGGTGGCATCCGCCTCTGGGACCAAAGGAAGGAGGGCCCCTTAATGGATATGCGGCAGCATGAGGAGTACATTGCTGACATGGCTCTGGATCCCGACAAGAAACTGCTGCTGACAGCCAGTATGGGAGGAAGGTGGCATGTGGCTCCAGTGAAGGTACCATCTACCTCTTCAACTGGGATGGCTTTGGGGCCACAAGTGACCGCTTTGCCTTGAGAGCCGAGTCCATTGACTGCATGGTTCCAGTGACAGAGAGTCTGCTGTGTGCTGGCTCTACTGATGGAGTCATCAGGGCTGTCAACATCCTGCCGAACCGAGTGGTAGGCAGTGTGGGCCAGCATGCTGAGGAGCCTGTAGAGAACCTAGCTCTCTCCCACTGCGGCTGTTTCCTGGCCAGCAGTGGCCATGACCAGCGACTCAAGTTTTGGGACATGGCCCAGCTGCGGGCTCTGGTGGTGGATGACTACCGCCGACGCAAGAAAAAGGGAGGACCACTGCGGGCACTGAGCAGCAAGGCCTGGAGCACTGATGACTTCTTTGCAGGACTGAGGGAAGAGGGAGAGGATGCCAAAACTCTGGAGGAGGAGGAGAGTGAGGATGACAGTGACTGAAGGGATGAGCTGAACCTCAGGATGGGTTCTCAGTGGACAAAAGTCTTGTTTTCTGGGTTGGATCCCTAGAGAGGCTGGGAATTGAAATTATCCTTTTGTGCAGCACAAGAAGATGCTCAGGATCAGCACACTGCTGTGAGGAAGTACTGGCTTTGTAGCAGCTGCTCACTCCACCAGTGTAAGACAAAGCCCACAGTTGGGGCAAGACAGCACAGACACAGGTATACACCAACCAGGGGTTTAATATAAATACAACCAGCATAGAAGAATTCAAAACTACACATACACCAAAACCATAACCAAGTGGTGGGGGCAAAGGCAGATGTTTGACCCTTTGGTTCCACCAGCCCTCAAATAAAAACTTCAACAAAGAAGACAAAACAGGGAAATAAGAAACAAAGATTCATACTAAACTGTGGGAGGAGGAGAGAGGGTATGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGACATAGAACACCTTGGGGTCCAATGAAACCCCAGAATGGGAGAAGGGAAGTTCCCTCACCACAACTTTGGCCAAACCTGAGCTGCCCCCAGGTGTTCTGGGGCCCTGCCCCAGCTGGGAGGCTGTGTCAAGTCTAGGGCAGGGCCTATGCTCCTCCCCTTCTTGGAGTCAGATAGTGGCTGCCCAGGCCTGCTGGGCTGGGTGCAGACAAAGGCTCCCTGTGGAGAGGATAAGGTCACTGTTGAACCATGGTACCTCCTGCCTCAGCCCCAGTAGACCAAAGGAGGCTGGCCCTAGACTCACTCATTGCTTCCAGCAGCCGTGCAGATACT EMBV3_18334 GAAATTCTCATCGGTCTGCTCTACAACGCCACCACTGGAAGGCTATCCGCAGAAGTGATA Gene GeneID:787880|SYT14:XM_002694296:387_cdna Constitutive 1 NULL GeneID:787880 16 GENE SYT14 NULL synaptotagmin XIV EMBV3_28962 GAGACTGGTCCTGGGGTCCTGGGAGCGCTGATTGTTGATCCATTTCAGATAATTATGGCC Variant GeneID:519224|TPRKB:XM_002691206:22_cdna 265^427 1 EMBV3_03527 GeneID:519224 11 GENE TPRKB NULL TP53RK binding protein EMBV3_12616 ACGCCAAAAACACAGATCTTCTGCGACCTGTCGATGTAGCGACTTCTAATAGTCTGGTGG Gene GeneID:516722|ASB5:NM_001075744:17_cdna UTR3_Alt 2 NULL GeneID:516722 27 GENE ASB5 NULL ankyrin repeat and SOCS box-containing 5 EMBV3_19929 TCATGAACCTCCGGCTCTGTGGATTGTTGGTTCTGATATCCTGGGTGCTGATTGCCTTGT Gene GeneID:100295806|LOC100295806:XM_002688651:29_cdna Constitutive 0 NULL GeneID:100295806 7 GENE LOC100295806 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_18092 ATCCTGCATGCCACTGTGCAGGTTCTTTTCACCATGGAGTTGACCTTCTGTGGTCCCAAT Gene GeneID:618675|LOC618675:XM_002693607:112_cdna Constitutive 0 NULL GeneID:618675 15 GENE LOC618675 NULL similar to olfactory receptor 1231 EMBV3_14242 GTGCCCAGTCTCACCATCTTTGTCTCTTATGGTCTCATCCTCACCAACATCCTCCACATC Gene GeneID:788573|LOC788573:XM_002699183:13_cdna Constitutive 0 NULL GeneID:788573 29 GENE LOC788573 NULL similar to olfactory receptor Olr1242 EMBV3_03801 CGTCGGCACACTGCTGTCCCTCCGGTTATGTGGACAGGTTCTGTTTTCACTTTTTCGTAT Gene GeneID:533768|TACC2:NM_001102159:26_cdna Constitutive 0 NULL GeneID:533768 26 GENE TACC2 MGC151590 transforming, acidic coiled-coil containing protein 2 EMBV3_26138 GAAACAGATTTCCTTGTGATACAAAGGTGGGCAGAGAGGGCCAGGATGGGTGTGAGATGA Gene BVT0102_033223 + 0 NULL GK000017.2:54338334-54358763 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080803 1 XLOC_049687 NonCoding TCONS_00080803 XLOC_049687 NonCoding NonCoding - 17:54342377-54342807 - TSS60743 430 1 TCONS_00080803_1 117 0.688372093023256 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000156363133083599 0.000282244628362206 0 0 noncoding 0 0 0 0 0.0068140039185841 0.952222452533314 0.0724763589537791 0.315770936260431 ATTTTTCAATTTTTAAATGTTACTTTATGAAGAACAATATTGATATAAAAATGAAAATTCAAGACAAGTTTAGCCATAATGTCACCACCTAATCAAGTAAGCCGTCCTGGGAGGTGCCGTGCTAGGACCTTCATCTCACACCCATCCTGGCCCTCTCTGCCCACCTTTGTATCACAAGGAAATCTGTTTCCCAGGCTCCCTTTCACTCTGCTTCCTGGTAGGTTCAGCCAGTCGCAGGCACTGGTGGAAGACTGGAGGGCCGAGGAAGGAAGAAGCCAGGGCATTTTTGTCTCCCTTGCTGCTTTGGGAAGCATCTCTGCCAGTGACTGCATGTTCGAGGCTCCAGATCCTCTGAAAGTCCAGTTTCTACTGGATAGTCCTGGCTCCTGGGCTCTGATAGTCCTACTTCCTCCCTTCCTTTCTCTAGTCC TCONS_00077312 . 5' 3872 TCONS_00077312 . 5' 3872 EMBV3_38571 CCACACTGGCCGTGAAGAGGTACTTCCAGGGCATCCATATCTACCTGAAAGAGAAGGAAT Gene GeneID:618985|LOC618985:XM_002689527:166_cdna Constitutive 0 NULL GeneID:618985 8 GENE LOC618985 NULL similar to interferon-tau EMBV3_37350 CAGAACAGTCCTGTGAGATAAGAATGGGTTACACTTTCCCCAAATACCGAGGCCAAGGCC Gene GeneID:515352|GLYATL2:XM_002693771:30_cdna Constitutive 0 NULL GeneID:515352 15 GENE GLYATL2 NULL glycine-N-acyltransferase-like 2 EMBV3_18707 AAGAACAATGCCGAAGGACTCCGGCCCGCTTCACATCTGGAACCTTGGCTGGCATCATGG Variant GeneID:613802|TMEM14C:NM_001035437:235_cdna 102^280 2 EMBV3_08798 GeneID:613802 23 GENE TMEM14C MGC126931 transmembrane protein 14C EMBV3_15708 CCACTAGATGTTTCTGTAATTGTTCTCCTACGTGTCAGTGGGGGAGATTTGCCAACATTG Gene BVV0101_010300 + 0 NULL GK000009.2:63499515-63520826 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34006 GCAGGAGAACTTCATCTTGGGCAGCTGTGGGACGTGAACCTGAAGATGCCCAGGAACAAC Variant GeneID:510492|ROGDI:NM_001075452:129_cdna 229^283 1 EMBV3_12620 GeneID:510492 25 GENE ROGDI MGC140572 rogdi homolog (Drosophila) EMBV3_08135 GAAGGAATCTGCTGTATAGAATGCAGGAGGAGCTACACCCACTGCCAGAAGATCTGTGAG Gene GeneID:281683|LECT1:NM_174269:14_cdna Constitutive 0 NULL GeneID:281683 12 GENE LECT1 CHM-I leukocyte cell derived chemotaxin 1 EMBV3_23058 GAGCCGTCATTCCTGGGTCAACACCACAACGCCCTGTGTGAGTGGGTGTTCGTCATTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28817 TTGGCCCTTATCACCAATAACATGGTGGGTGCTCTTACAGAAGGCCTACCTGAGCTTGCA Gene GeneID:541012|TCP11L2:NM_001105431:19_cdna UTR3_Alt 2 NULL GeneID:541012 5 GENE TCP11L2 NULL t-complex 11 (mouse)-like 2 EMBV3_16025 TCTACGCGGTGGTGACCCCTATGTTGAATCCGCTCATCTACAGTCTGAGGAACAAGGAGA Gene GeneID:532208|LOC532208:XM_002687123:472_cdna Constitutive 0 NULL GeneID:532208 4 GENE LOC532208 NULL similar to olfactory receptor Olr801 EMBV3_28584 AGTGCCTGCAGATTCTCTACGAGTCCTGCCCCAAGTACAAGTTCATCTCTTGTCCCACCT Gene GeneID:100299353|LOC100299353:XM_002691683:100_cdna Constitutive 0 NULL GeneID:100299353 11 GENE LOC100299353 NULL hypothetical protein LOC100299353 EMBV3_16350 ATTGATTGGTGTCCCTGGCAGACTGAAGTCCTCGCTGTTGGAGGAGGAATGAAGGATGGA Gene GeneID:522049|CDC20B:XM_002696334:28_cdna Constitutive 0 NULL GeneID:522049 20 GENE CDC20B NULL cell division cycle 20 homolog B (S. cerevisiae) EMBV3_19699 CTAAGTTTTTCATCTGGCCTGTCCCCAGACACTCCCATGTCTATAATTACCTCCCCACCC Gene BVV0101_023493 + 0 NULL GK000003.2:7944608-7996510 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171860 TCONS_00171858 TCONS_00171859 1 XLOC_103930 NonCoding TCONS_00171858 XLOC_103930 NonCoding NonCoding - 3:7959354-7961874 - TSS128105 1303 1 TCONS_00171858_2 62 0.0437452033768227 2 0.483525208416038 1.04411906765673e-05 0 0 7.07803689066631e-07 0 0.000208638432701627 0 1.81570989843364e-05 6.05506612548131e-06 1.96478095090344e-05 0 0 5.5039259061319e-07 0.000606500783180472 3.76311905907164e-06 1.52632717278857e-08 0.000331280257120589 4.9820900171465e-05 2.75139867934604e-06 2.7592813885872e-06 0 0.000128138828100122 0.00059846096574058 0.000265674389744901 8.86003996932976e-07 0.000129770565231682 0 0 0 0 XR_231032.1 LOC101902570 PREDICTED: Bos taurus uncharacterized LOC101902570 (LOC101902570), 2e-162 576 92.23 0.302379125095932 0 noncoding 0 0 0 0 -0.0134621900680937 0.90466340428067 NA NA CTCCTCCATTGCTCCACCCGATCCAGAGGAAAGGAGACCAACCAGAAGATTGCTGCCAAGGTCCAAGGCTTCACCCCCTGGATCCGTGAGTCAAGACTGAAGACAGCTCCTCCTCCAGAAGAAGATCCCCAGCCAGCAGAAGATTCCACAGACATCTCTTATGACTGAAAACCTCTGGATGGCCTTTGCTTTCTTTTCGAAAGGAAATCAGGTGGTGACCCCTCCTTGAGTTCTGAGCCTTGAGATATCTTGATCACTACTCCTTACAACTGACCCCAATAATCTTAGTTCTTCTTAATACTAATGTACACTTTATGACAATTACTAAATCTGCTCTTACACCAGCTTTCCATCGCCCCTTTTGAATTTGACTTCTACTGGGCATTACTGGAAGATATAAATTTTCCAAGAGCCTCAGCTATCCTTACGGCCTTCAAATTACCAAAGACAGTTCATATTACAGTTAGCATGGGACAAGATCCTTCGAGACTTCCAAGACTATTCACCAAACAAGTCTGTCTCCTCTTAAACCTGGAGCCATGAGACTCTTAGTTTTCCTTCTTGGAAGCCTAGTTAGTATATGGCGGAAAATGTCAGGGGAATGGACAAGCAATTCTTTAGTAAATATCTCCACTATTACAGCATAAGGGGAGAACCTTAGGGACTGCTGGGTATATCACCAACACCGGGAAAGAGGCCTACAGTTTCTCCCCTACCACCCTCTTTCACAGGAGATCCAAGATTACAATCTAAGTTTTTCATCTGGCCTGTCCCCAGACACTCCCATGTCTATAATTACCTCCCCACCCTAACCTGACAAGAAACAAAAGCCAGACCCATTGCACTGTATCCAGCGGGGGAGCTGTTGTCACTGCTGTGGCTCAGGGCCCAGAGGAGGCCCCTGCAACTGTTAGGGGAAGCACACTGATTGAAACCACTCACCCTGGCCAGGCACCATAGTAACCATTTGCATGAGTTGTTTTATGACAGGAGATCCTGATAAGGAATACGGAACTAATAAGCCACCACCAACCGGAAGAGTTCAGGAAAGGTCTAAAGGAGACACCACGTGTCCGTCCACTTCCCAGAATTCCTCTTGCCAGCATCCATCTTGGTTGAGCGATGCGTGCGCCACCAGGAAAGACTCTGAATTAGAATGATTGGCCAAAGACCACCTGGAAACTAATACCATCACCATAAAACCCGAGACTTCGAGCCACGCGGCAGAGCAGTTCTCCTGGGTTCCCTGACCCTACTGCTCTCCACCCGGCTGGCCTTTCCCAATAAAATCTCTTTGTCAGCA TCONS_00171851 TCONS_00171852 TCONS_00171853 TCONS_00171854 TCONS_00171855 TCONS_00171856 s 5' 14748 TCONS_00171851 TCONS_00171852 TCONS_00171853 TCONS_00171854 TCONS_00171855 TCONS_00171856 s 5' 15998 EMBV3_14951 CTCTGAGCCCAAGTGCCACAACTACAGAAACACACGTTAACCTAGAGCCTGTGCTCCACA Gene BVT0101_070676 - 1 EMBV3_34538 GK000003.2:68986405-69195015 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00178210 1 XLOC_107983 NonCoding TCONS_00178210 XLOC_107983 NonCoding NonCoding - 3:69132879-69133737 - TSS132969 858 1 TCONS_00178210_1 88 0.29020979020979 1 0 0.00137959725478685 0.000199094856352599 0.0018227579532655 0.000551673874778566 0.00261532698505948 0.00081366173489504 0.000210702582507685 0.000275744685511925 0.000128743379697832 0 0 0 0 0 0 0 0 0 0.00119515447161393 0.000553187329431516 0.000247669825726697 0 0 0 3.23006240745359e-05 2.46344833158317e-05 0.000587281011724782 0 0 0 XR_138726.2 LOC100847934 PREDICTED: Bos taurus uncharacterized LOC100847934 (LOC100847934), 1e-29 134 74.88 0.243589743589744 0 noncoding GGGAAAGTGGACGGCATCTAACAGTGCTCATGGTCTGCCTACTGCCCTTTGTAAGAACCATTGCTTCTGATGGGCGTTTTCATTGTTTCTATTAGACTAAAATGTTTTCTTCTATGACTGCGATGCAGTGGTTACTAGGCAGTTAGAGAAAGTAAGTTGCGTGGCAAGACTCCTGAAGGAATGCGGGTTCTAAGGGCTGCCCAGGTGACAACAGTGCACCCTCACACAGGGTCCCTTCCTTTTTCTGTCCCCTCACATCCTGTGACTGTTGCTGCTCTTGCAGCCTCTTCATTATATTATACCTTTCTCCCAGTGTCCGTTACAGGAAGGCAAGTTCCTCATGGGTCAGGATCGTGTTTTACTCATGAGTCTTTTAGCAGCCCAAACACAAATGGCTATTGGTTGTACATTTCCTCGTATGCTTTCAGTTGCCTCTTTGGAAGATAATTTCTTCCTTTCAATTATTTACACCTTGAATGGAGGAAAATTTTGAATAAGCTGGGCTCATTTAAAGTAAGGAACATAGATTGCCTGAGAGGGGAGTGGAAGGCATTCTAAGCGGAGACAACAGCATTGATACACTGCACAGAAACAGGATAAAGGGCTTCACTGGTGGTTCAGCGGTAAAAACACAGATTCAGTCCTTGATCCGGGAAGATCCCACATGCCGTGGAGCAATTAAGCCTGTGCGCCACAGCTACTGAGCCTGTGCTCTAGAGCCCAGGAACTACAGCCTCTGAGCCCAAGTGCCACAACTACAGAAACACATGTTAACCTAGAGCCTGTGCTCCACAGCAAGAGAAGACCGTGCAAGGGATACCCGCGCCCTGCAACTAGAGAAATGCCCGTGCAGCGAAG TCONS_00170209 . 5' 61279 TCONS_00170209 . 5' 61279 EMBV3_04392 GTATGAGTCTTCATTGCTGCTTACACAAATGCAGAGGTCTTCCTTACAGATGGGAAATTG Gene BVT0102_264203 + 0 NULL GK000009.2:61907656-61921604 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00237485 TCONS_00237487 TCONS_00237486 1 XLOC_144733 Coding TCONS_00237486 XLOC_144733 Coding Coding PNRC1 9:61917896-61925644 = TSS177537 5482 1 TCONS_00237486_2 329 0.159613279824881 2 0.292629404930941 1.27730642292304e-10 7.88150839748095e-12 4.43351235941412e-12 3.47809173056442e-12 2.96690658944715e-12 4.53010559402782e-13 1.45297437615494e-06 2.35471082272555e-06 0.000176155071520822 0.000394778520994484 0.000131342715967417 0.000264717292195739 0.000166713772240804 1.34983730054376e-09 0.000196575128303454 0.00257417088286322 0.00222173766609202 0.00340853654644762 1.88832960476786e-11 5.04235945217395e-12 1.3756227155632e-12 0.000885718234793172 0.000561595428445532 0.00201125254385077 3.9733635566606e-12 7.38860780865143e-12 2.98769614360241e-06 0.000347627331343122 0.000264893670136159 0.000872396110330253 NM_001034308.2 PNRC1 Bos taurus proline-rich nuclear receptor coactivator 1 (PNRC1), 0.0 3169 99.83 0.321780372126961 NM_006813.2 PNRC1 Homo sapiens proline-rich nuclear receptor coactivator 1 (PNRC1), 0.0 2161 86.03 0.335279095220722 TCONS_00237486_2 sp|Q12796|PNRC1_HUMAN PNRC1_HUMAN Proline-rich nuclear receptor coactivator 1; 3e-177 499 87.23 0.996960486322188 1 noncoding 0 0 0 1 -0.23330084876399 0.232453444784219 0.0510686247547485 0.484875484824897 AAGATATTTGTTGCTGCGCCGCCACCGCCCGAGCCATGGTCCGCGATTCACTCCGGCTCTCTTAGCAGCAGCAGCCGCCACCGCCGCCGCCCTGTGATCTGTGGCCTCACTAGCTCCTTCTACTCCTGCAGAGCCACTTTTCCGCTTAGCGCTATGACCGTCGTTTCTGTCCCACAGCGGGAGCCGCTTGTTCTAGGCGGCCGCCTTGCGTCCATGGGCTTTTCCACCCGCGGTTACTTCGGCGCCCTCCCGATGGTTACCACTGCTCCGCCGCCTTTACCCCGGATCCCGGACCCCCGGGCGCTACCTCCCACTCTCTTCCTCCCTCACTTCTTAGGGGGAGACGGTCCCTGTCTGACCCCCCAGCCTCGCGCCCCGGCACCTCTTCCCAACTGCAGCCTCGCCGCGGCGGGGGGCACCCCTCGGGCGGCACCAAAGAAGCGACGAAAGAAGAAGGTGCGGACCAGCCCGTCGGGGCAGTTCCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGCCTGGAGAGCGGGCGGAGTCCCGCGACGGGCCTTGGCGGAGCGCAGCAAGTCCCGGACCAGGCCCAGGCCGCCGCCTGGGTCCCAGCTCCTACGACCGCCACCCGAACTGAGGAAGCGAGCCCTTTACTTGGCCCGCTGCCGCCTGCGGCGCCCGGCCAACCCTCGTTCAGAAGAGAGGTTTTAAAATCAAAGATGGGAAAATCGGAGAAAATTGCCATTCCCCACGGCCAGCTTGTTCATGGTATACCCTTGTGTGAACAACCAAAGATAAACAGACAGAAAAACAAATATAACTTACCACTAACCAAGATCACCTCTGCAAAACGAAATGAAAATAACTTTTGGCAGGATTCTGTTTCATCTGATATAATTCAGAAGCAGGAAAAAAAGCCTTTTAAAAATACTGAGAATATTAAAAATAAGCATTTGAAGAAATCATCATTTCTAACTGAAGTGAGCCAAAAGGAGAATTATGCTGGGGCAAAGTTTAGTGATCCACCATCTCCTAGTGTTCTTCCAAAGCCTCCTAGTCACTGGATGGGAACCACCATCGAGAATTCCAACCAAAATAGGGAGTTGATGGCAGTACACTTAAAAACTCTCCTAAAAGTTCAGACTTAGATCTCAGTATGTATGTAAAACATAGTTTTTCCAAAATCCCTGGACTCCTTGAAAAGAAGTGGTACAGAAACGGAAAATTGCCTTGTAACATACAAGGGCAGAAGATGAGTTTAAAAAATTACAAACAGCTTGTATTATATTTTATATTTTGTAAATACTGTATACCATGTATTATGTGTATATTGTTCATATTTGAGAGGTACATTATAGTTTTGTTATGAAAGTATGTATTTTGCCCTGCCCAAATGGTAGGTGTTTTGTATATATACAGTGGAGAAATTTTAAGTGTGCTAAGGCACATATAAGACCGATTTATTTGCACAAGGTACTGAGGTTTTTTTTTCAAGAAACAGCTGTTGAATCTCAAGGTGAAGATCTCAATGTGAACAGTTTACTAATGCACTACTGAAGTTAAATCTGTGGCACAATCATTGTAAACATAGGGTTTGTCTATGTTTCTCTAAATTGATTTCTGCCTTCTAATCTGTAATTACTGGAAAACTTCTATCCCCATTTTTACCAAACTTAATTTCTGGTTTTTTGGTTTATATCCATTCAAATTTAAATTTTTAATGCCAACAAAATCGGTTGTAATCAAATTTTAAAACAATAATAATAATTTGGCCCCCCCCTTTTAAGTCTTGACTCTTTGTGTGTGATTGTTTTTCATGTTTGAATGTGTAACTAGGAGATGGATTTTAACTTTCCATTTCACTGGCTAAATGTTTATACTAATTGTATGTCCTCTTGAAATTTGCAGAGTCTAAAACACTACTACCTCTAAGGGGAGGAATTCCCCATCTTATGAATGGAAATGGTTGTGGGCAAAAGTGTAGCTGATTTAGTTTATAGCTTAGAATGTTTTTATTTCCCAACTGTTTTTGTAAAGTACCATTTGACTTACCACATTTACAATGAAGGAAAATGGCACTTGTTTGGTTTTCAAATTTTCAGTATACTGGTTTTCAAAATCAGTATATTGATACTAAATGGGATACTTGAATCAAAGCAAATATAACGTTAAAATAATAGATGGAGATTTTGGAATCTGAAGCTTGCTTGAAGTTATTGTAGCATATGTGTTTTTTACTTTAAAATTCAAACTTCTACTCAATAGTGTATAAGGTCTATTCCAATAAGAAATTCTAGAACATGATTTTCCCTTTTCATTATACAAAGCCAAGGTTATCTCATACAGTACAAAAGAAAAAGTGGTAATGAGTAACTGGTCAGTATTTAGACGTGTGAAAATGTAAAGTTGTTAAAAGGTTATATATGATTTTATAAAACAGTATAGATGAGAAAGGTGCTACCATCCTAAGGGGAGAAAATGAGGCATGTTCTCAATTTCTTGGATCCTTTGGTTCACACAAGGGAGGACCTAACTTTAGAATCCTATTGACTCAATAAGCAGTGGCATGATGACTTCTTACTGCCACCACAAAATCTCTTAAGAATGTACAACTTGTAAACCCGTCCAGCCATTTTTCTTTGGCACTGATGCCTTGTTCTTATGAATTTAGAGAAAGTTACACTTAATTTACATACAGGTATATATAGCTAGATTTTTAAAAAGCATTTAGAGAAACTAAGATACAGGTGCACTTTCAACTTGTGAAGACTTTTTCTTTTAGCCAAGAGGAGTGTTAATACACTGGTAAAGAAGATGGCTAAATTTTTTAAGGGGTGATATAAGGAAATTATAAATAAATTTTATAGTTTGAAAAGTGGTTGAAACAGACTACAGATATATTTAGTGAGAAGGTGTTAACAAGTTTAAGTCGAATAGTTTTGGTTTTGCAGTAAAAGTTATTTAGCAGTCTTAGCCCCTTCAGACTACTATAACAAAATTCTAGAGATTGGGTAGCTTATAAACAAAATTTCTCAGTTCTGTAGGCTGGGAGGTCTTAAGATCAAGGCGTCAGCAGATTTGGTGTCTAGGGCTTCCCAGGGGACGGTAGTGGTAAAGAGTGTGCCTGCCAATGCAGGAGATGGAGATTCCAATCCCAGGGTCAGGAAGATCCCCTAGAGGAGGGCATGGCAACCCACTCCAGTATTCTTCCCTGGATAATCACATGGATAGAGGAGCCTGGTGAGCTACAGTCCATAGGGTTGCAAAGAATCGGGACAGGACTGGAGTGAGCACGTTAAGCATGCCCAAGAGCCCTCATAAAGTTTGTAGCAGGCGACCTTTAGCTGTGTACGCACATGGCACAGGGGTGGGGGTGCTTTCTGGGCTCCCTTTTATAAGGACATGAATCCTATTCATGAGGGTTCCTGCCCTCCTATCCTAATCACTTGCCAAGTCTCTACCTCCTAGTACTATGTTTCCCCTATTGGAGCTTGAAACATTTCCTCCCAATGTTCCTGTAATTTGTTTTGTGGGGGTATAAAGTAAACTACTAATTTTAACTAATGGCCTAGTTTAAAATTGCAAAGGGGTAAAATGTGTATGTGAGTGGAAAAAAATTGTTCTATTCAGTGGCACTTCCCCTATAAAACATATATGCAGTTTAGAATCTCATACTGAAATGTCTTTAGGTAAATTTGTACAATTTGATACTGAGTTTATTCAGCTCATACCACTGATGTGGTGACAACATAGAAAGCTGCTTTTATTTGCATTAATCTTGGTGCTAAGTAATTTGTGTCCCTGCAGAATGAGAAAGGGAAAAACAATAAAAGACCAAATTACAATATTAAAAGATTGATGGGAGCCATTCTTTTCAAACTTAAAGGTGGTTTTTAAGTTAAAATACAAACTTTAGTGTAGTTTACAAATTTGAAGATCTGAATGTATTATCAAGTAGTTTACATTTTACTCTTAACCAGCTTTCAGGTTTCTATACCCCGTTCCTTCACAAATTATAAAACTAGTACAATTGTGGGAAATGAATGGGATCCAGTTATGCTGTACTTAAAACCACTTGTATTTCTTTTGCCTAGTACGTGGTTTTTAAACTAGCTAAAAACCCCTAGTATTTGTTCTGTCTTCACCTGCCTTCATTAAAAGCCCTGACTCAATTTTGGTGTTGAGAAGGAACAAAACCCAGGCCCATCCCAGTGCTTCTGCCCCTCAGCACCAGGGCCCAGCATGGACCTGGTAAGGAGGGCACAGTGGATATCCACCCAAGACAGGGAAATGAGGATTATGAGGAACTATGAATGTAGTGGATAAACTAGACCCCTCTGATGCCTCAGCTCCCAGCATGTTCTCAAAAGCAGTTCAATGTCTGGGGAGGAACAGGGCTGTCATAGCTCAAAACCACCAACCTCTACCCTATTTATTCCTGGTTCCTCCAGAAGCAGTGCTGGGGAGAAACATGAATATTCATTGGTTTGAGATTACCAAAAAAATGCAAGGCAAGTGTTTTGTGGGGGAAGCTGGTTTTGTGATTGAGGCGGTGGATTAATTTTGAGTTGAGTCCACAGGGTCGGAACTGGATACAACTGAGCGACTAACCGTTTCACTGAGCTCCTGTGGTAGCTCAGATGGTAAAGAATCTGCCTGCAGTGCAAGAGACCAGGGTTCAATCCCTGAGTTGGGAGGATCCCCTGGAGAAGATAATGGCAACCTATCCAGTATTCTTGCCTGGGAAATCCCATGGAGCTGTAGTCTGATGGGCTACAGTCCATGGGGTTGCAAAGAGTCGAACACGACAGCAACAGACACTTTCTCCATTAAGCAATCAGTTCTAGAAAGGAAGCTGCAAAGAACTTCTACTTGATACTGGCATTTTTGTATGAGTCTTCATTGCTGCTTACACAAATGCAGAGGTCTTCCTTACAGATGGGAAATTGATTTTAAGAGTTAAGCCCATAGTTAAAAATTCCCTCAATTGTTAAGTCACCAAGTTTAGCTTTTAAAAATAGTATGTTGTAAATATTACCACTAATTGGCCTACATGAGTTCTGAAGTCTCCCAAATCTTGTCTATGATTCCATCAAATGGCTCATTTATGTGCATATGCACATTTCTTCATATAATAAAATTCCTAACAAACTAATATAGAGTCCTTGTCTTGGATAAAAACTTCAACCACTACTCTCCTTTGTTTGAAATAACCTGTTCTTTTGTGTCATTTTGAGCAGCATGTCTACAGAATGTGGGAGATTAAGTGTGAAGTTATGTTCAGGAGATAGCTAACCCTTGGACATCACAGGTTCAAACTGAGCAGGTCCACTTTATACACATGTATTTTTAAAATATTAACTACTACATAATCTGCAGTTGGCTGAATCCCAGGATGTGGAACCTTGGATATGGAGGAGTCACAGATAACAGAGTCAGACTATAATTTATATGCATGCTTCTTTCAACTGCAAGGTGCACCTAACC EMBV3_09373 GTCATTACAGGAAGGAGTTTGTGTCTAAAATCTGAGTATTGTACATAAGAAGCCAAGAGG Gene GeneID:505853|MGC148679:NM_001109790:15_cdna Constitutive 4 NULL GeneID:505853 2 GENE MGC148679 NULL hypothetical LOC505853 EMBV3_16721 GGTTCTCACCTTCAAAAACAGGGGCGACCCCAGCCTCCAGACAGAGGCCCTTTTATTTTT Gene GeneID:533250|ZDHHC5:XM_002683757:4_cdna Constitutive 0 NULL GeneID:533250 15 GENE ZDHHC5 NULL zinc finger, DHHC-type containing 5 EMBV3_20120 TTTCAAAAACAATTATAACGTGGTCCCATCTTTCTCGGGGCTGGGCCTGCTCACACGGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12129 TGGAGCTGAGGAACCGGACCCCGGCAGCTCTTCCCAACTTACAAAGAAGATGGAGAGGAA Gene GeneID:509685|ANP32B:NM_001035074:23_cdna Constitutive 0 NULL GeneID:509685 8 GENE ANP32B MGC128074 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B EMBV3_20822 GGTCCTGTTAGGAGACTCGTGGTGTGTCACCTTTGTTATCTTAAAAGCTGGTCCCTTCGC Gene GeneID:539668|CUL4B:XM_002699510:100_cdna UTR3_Alt 2 NULL GeneID:539668 X GENE CUL4B NULL cullin 4B EMBV3_13555 CATATTTATGCAGTTTTTAAAGTTTATAACAGTCTGTTTGGCCATTACTACACTTTTTAC Gene GeneID:100337167|LOC100337167:XM_002689999:8_cdna Constitutive 0 NULL GeneID:100337167 9 GENE LOC100337167 NULL brain-specific angiogenesis inhibitor 3-like EMBV3_24715 GTTTCTGTGGGTCCAGATTTGCTGGGTGAGGGGAGTAAAGGTGGAGCAGAATCCTTCAGT Gene GeneID:100335238|LOC100335238:XM_002690609:102_cdna Constitutive 0 NULL GeneID:100335238 10 GENE LOC100335238 NULL hypothetical protein LOC100335238 EMBV3_14602 TTAGAGACTGGAGAAGGACCGGAGGATCAGTGCCCTTCCCCCAGCCAGCCCTGGCCATTC Gene BVV0102_219768 - 1 EMBV3_07066 GK000010.2:89128261-89244968 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29003 TCGTTTCCTCAGATTTCTAAAGCCAAAATGGGAAGCCCTTACACAGGTCACAAACTGGCA Gene GeneID:786577|TTC9C:NM_001083792:136_cdna Constitutive 2 NULL GeneID:786577 29 GENE TTC9C MGC139386 tetratricopeptide repeat domain 9C EMBV3_08339 AGTGCAGTTCGCATCCTAGAAGTTGTTAAGGAACTTAGACCAACTTTGAATGAACTGGGA Variant GeneID:444878|COX5A:NM_001002891:34_cdna 400^444 3 EMBV3_34802 GeneID:444878 21 GENE COX5A MGC133649 COX5A protein EMBV3_43286 GCTCTTCCGAGATCTGGTGAGTCTGCAGGTGCCAGACATGACCATATTGTGTGATCCGGA Variant GeneID:617968|C25H7ORF47:NM_001102315:326_cdna 714^924 3 EMBV3_01091 GeneID:617968 25 GENE C25H7ORF47 MGC148922 chromosome 7 open reading frame 47 ortholog EMBV3_33068 GGAGGCCCCATCCCTCCGGGTTTCTTTCAGCCTCCGGGAGGAGTTCCTGGGACACAGCCA Variant GeneID:530184|SSBP3:NM_001104986:76_cdna 498^638 2 EMBV3_17092 GeneID:530184 3 GENE SSBP3 MGC166241 single stranded DNA binding protein 3 EMBV3_32698 TCCTCAAAGAATCGAATTTCTGTCTCAGCTCCCACTTCAGGCAAGCAGCCCAATCCTTGG Gene GeneID:508735|PRPF4:NM_001034330:14_cdna Constitutive 0 NULL GeneID:508735 8 GENE PRPF4 MGC129043 PRP4 pre-mRNA processing factor 4 homolog (yeast) EMBV3_21824 ACTCTAGGTCTGACTTTCCAGTGGGGGTGAACCAAAGCCGAGAGCAGGACAGAAGACAGA Gene GeneID:282359|SLC2A4:NM_174604:30_cdna Constitutive 0 NULL GeneID:282359 19 GENE SLC2A4 GLUT4 MGC137703 solute carrier family 2 (facilitated glucose transporter), member 4 EMBV3_00515 TGGTGTTATAGCAACCGTAGCCTTCTTAATGTGCTCGCATTTGGCTGTTCATTGGTTTCA Variant GeneID:504456|TMEM50A:NM_001075163:72_cdna 294^361 2 EMBV3_43031 GeneID:504456 2 GENE TMEM50A MGC139369 SMP1 transmembrane protein 50A EMBV3_40682 CCCACCTGGGAGTCGTGAGTGTACTGTATGGTGCTGTCTTTTTTATGTATCTCACTCCTG Gene GeneID:512280|LOC512280:XM_002687517:445_cdna Constitutive 0 NULL GeneID:512280 5 GENE LOC512280 NULL similar to olfactory receptor, family 9, subfamily K, member 2 EMBV3_18463 AGGTCAACCTCAGCTGCAAGTACACGTACAACCTCTTCTCAAAGGAGTTCCGGGCATCCC Gene GeneID:281050|CD28:NM_181004:55_cdna Constitutive 1 NULL GeneID:281050 2 GENE CD28 NULL CD28 molecule EMBV3_29071 ATGAGCTTCTAGAAATTTCACTTGCGAGCTTATTTTTGCTTCCTGTGTCATCACCTTTCC Gene GeneID:614774|C6H4orf34:NM_001046543:41_cdna Constitutive 0 NULL GeneID:614774 6 GENE C6H4orf34 C4orf34 MGC137234 chromosome 4 open reading frame 34 ortholog EMBV3_33126 GTCACTAATAACGTAATAATGGGCTCCTCTGCACGTTACGAGCTGGACTCCAAGGAAGAC Gene BVV0101_031699 + 0 NULL GK000020.2:19588209-20448526 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00114749 1 XLOC_069343 NonCoding TCONS_00114749 XLOC_069343 NonCoding NonCoding PDE4D 20:20130234-20131455 x TSS85498 1221 2 TCONS_00114749_1 77 1 0 5.57150272815308e-05 1.06163481367612e-11 0.000133479684378038 5.3008894264906e-05 0.000683743757878276 1.98215475270747e-11 0 0.000198585679780062 8.40062691586247e-05 4.38070934457703e-05 0 0 0 3.55969490319133e-05 4.01818052728086e-06 0 0 0 0.000237863568312405 9.1476137564046e-06 0 0 0 0 0.000170232765454878 0.000426998368832786 7.19796869880449e-05 0 0 0 0 noncoding 0 0 0 0 -0.19649738497733 0.422910911716032 -0.0245619909170005 0.621223851348504 GCCAGATGCCTGCCATGATGGTCAGTCAGCTGCCCTGGCCATGCAGCAACCCCCAGCGCTTGGTGGACACAGTAGCTTCCACTGGTACCTGCAGCTGCTCTGAGGACGCTCTGTGGAGCTGGCTCATATGGAACCTCAAGCTACAGGAGCTTTCAGGGACCAAAACAGCACTGAGTCCCGTACAAACTGCGATGTCAGCTGTCTCGCTTATTGCAAAGGTGAAGGGGGCTCAGGTCTAGTGCTGGGAGCAAGGCTGGGAACCAGGTTCCACATGGTGTCTCTCATTAGACGCGCCAGGTACGTTTGGGCTCTCTTATATTGTGGTCTCTGAAGAAGACATTTCTTACTCAAAGAACTTACTTTAATGTATAGGAATTTCAATTATTGTCCATCTCTTGACCAATGGCAAGAAGAAAACAGGTAAACCAGACAGACTATGAAATGCCAGCTGAAAATCATCACCAATAAGATCTTGAAAGATAAAAATGGTAAAGACAACCAATAATGTAATAGTCAACGGAACGCAAGTCTATTTGAAAGCCATTCGCGAAAGACCAACATTAACAACTATTCCAGAATCACTTTGATGTGGTGACCACAAATGAGCCCAATTGAAAGGTCCTGATTGGACATGATGAAGTTCACTTTCAAGCAAAGTATAGTCACTAATAACGTAATAATGGGCTCCTCTGCACGTTACGAGCTGGACTCCAAGGAAGACACTTGAATCAAGTGAAGTGTGGGTCTAGTTTGGAGAATATGTTAATTGTCTTCTGGTAATAATTTTAGAAAACATAGGTTTTCTTCTCCAGGCAATTATTTTAATGAATCAATTGGAGTTTGAAGAAATGATTAAATGAGTTCAAATGTGGTTTCAGGTTCAGCAAAATGAGATCATTTGCTCTGTTTTTGGATCAGCTGAGGTCAAGCCCCATGTCTAAAATAGACTAAAAGGAATTGGAGTAATTTTATTCTTTTGCCCTTTACACCCTTCACCCTTCCATCCACTTCTCTTCCCCAAACATCTGTTCTTTTGATCTCATTGAGCTTTCAGCTATTATATAATTACTTCTTCTCTCCTCTCCCAAATTGAATTTAATCTCAACTCTATGGGTCCAAAGTGGGAGTATTGGAATGGCGTTCCTTCCTACACACAACTGGGGTATTGATTAAACAAGAAGGTAACTTTTATTTATGTTCTGACTTTCATTAAACCAAACT TCONS_00113492 TCONS_00113493 TCONS_00113494 TCONS_00113495 TCONS_00113496 TCONS_00113498 TCONS_00113500 TCONS_00113502 TCONS_00113503 r 3' 350 TCONS_00113492 TCONS_00113493 TCONS_00113494 TCONS_00113495 TCONS_00113496 TCONS_00113498 TCONS_00113500 TCONS_00113502 TCONS_00113503 r 3' 1570 EMBV3_42107 GTGGGGAAAAATGAAGCTGTCTTAGAGTGGGACCACCTTCCTATTGATGTTCGGAATGGA Gene BVT0102_065483 + 0 NULL GK000020.2:23219739-23260282 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00113534 TCONS_00113537 TCONS_00113535 TCONS_00113536 1 XLOC_069060 Coding TCONS_00113536 XLOC_069060 Coding Coding IL6ST 20:23212609-23274582 j TSS84909 7266 1 TCONS_00113536_6 918 16 0.883011682695411 0.000121706457327175 8.68689710545272e-05 5.92776015645889e-05 0.000131343057486914 7.52031245210004e-05 1.42813813242626e-05 0.000102375806910832 2.96848959676731e-06 0.000276309235732414 4.28034279498417e-05 7.24996431981545e-06 2.40929846356272e-05 2.7894948502441e-05 2.26002819696508e-05 1.23118486570184e-06 0.00878437939192069 0.00492743951045648 0.00635982055314801 0.000161890003290135 5.56967963711831e-05 9.62983565334147e-05 0.0021471479382423 0.00296837194224268 0.0060930482189018 7.32147631424506e-05 9.07744880725125e-05 0.000102036308656145 0.000263440847120938 0.000168233759809604 0.000556213698327386 XM_002696322.3 IL6ST PREDICTED: Bos taurus interleukin 6 signal transducer (gp130, oncostatin M receptor) (IL6ST), mRNA. 0.0 1.273e+04 100.00 0.971235893201211 NM_002184.3 IL6ST Homo sapiens interleukin 6 signal transducer (gp130, oncostatin M receptor) (IL6ST), transcript variant 1, mRNA. 0.0 4257 86.54 0.488714560968896 TCONS_00113536_6 sp|P40189|IL6RB_HUMAN IL6RB_HUMAN Interleukin-6 receptor subunit beta; 0.0 1619 87.38 0.998910675381264 4 coding 0 0 0 0 -0.0608633899460664 0.748396345253972 0.00845321805482957 0.872545387578683 CGCCTTGCCCCGCAGCGGGAGGAGGGACGCGTGCCGCGTCTGCTGGAAGGTCTGGGGAGCTAGCCGGAGCTGGGGCAAGGAGCCGACAGGCCCGCGGAGCCGCGCGGGGAAGGCCCGGGCGCATCTGAGCTTGGGGCCGCGGCTGCTGGCCGACGGACTCGGCCGGGCCAGGCGCCGAGTGGGACGTGTTCTGTGGAGACGCGGAGGAGCGAGTCACCGCGGCCTGAGAAATATCTATGCAAGATGTTCACATTGCAAACTTGGATAGTGCAAGCCTTGTTTATTTTCCTCACCACTGAATCTATAGGTGAACTTATAGTTCCATGTGCTCATATCCACCCTGAATCTTCAGTTGTACAACTTGGTTCGAATTTCACGGCAGTTTGTGTGCTAAAGGAAAAATGTATGGATGATTATCATGTGACTGCTAATGACATTTTCTGGAAAACAGGCCGTGTACCTGTTCCTTATGAACAATATAGTGTCATAAACAGAACAGCATCTAGTGTCACATTTCCAAATATAACTTTAATAAATGCTCTGCTCACTTGCAACATTCGTATGTTTGGACAGATTAATCGGAGTGTTTATGGAATCAGAATCATTTCAGGCTTGCCTCCTGAAAAACCTAAAAATTTGAGTTGCATTGTGAATGAAGGAAAGAAAATGATGTGTCAGTGGGATCCTGGAAGGGAAACATACCTGGAAACAAACTACACTTTAAAATCTGAGTGGGCAACAGAGAAGTTTGATGATTGTAAAGCAAAACGTGACACCCCCACCTCATGCACTGTTGATTATCCTCCTGTGTATTTTGTCAACATTGAAGTCTGGGTAGAAGCAGAGAATGCCCTTGGGAAGGTTACCTCAGATCATATCAATTTTGATCCTGTAGATAAAGTGAAGCTCAATCCACCACATATTTTATCAGTCAACAGTTCAAAGGAACTGTCTAGTATTTTAAAATTGACATGGACTGATTCACGTTTTAAGAGTTTTATAACACTGAAATATGACATTCAATATAGGACCAAAGATGCCTCAACTTGGAACCAGGTTCCTCCTGAAGATACATCATCTACCCGATCTTCATTCACTGTTCAGGACCTTAAACCTTTTACAGAATATGTGTTTAGGATTCGTTGTATGAAGGAAGATGGTAAAGGATATTGGAGTGACTGGAGTGAAGAAGCAAGTGGTATCACATATGAAGATAGACCATCCAAGGCACCAAATTTCTGGTATAAGATAGAGCCGTCTCATGCTCACGGCACTAGATCTATACAACTCAAATGGAAGACATTGCCTCCTTTTGAAGCTAATGGAAAAATTTTGGATTATGAAGTGACTCTCACAAAGTGGAAATCACATTCACAAAATTACACAGTTAAAGACACAAAACTGACAGTAAACCTCACAAATGATCGCTACGTAGCAACTCTGACAGCAAGAAATCTTGTTGGCAAATCAGACGCGTCTGTTTTAACTATCCCTGCCTGGGATTTTCAAGCTACTCACCCCATAACCGATCTTAAAGCATTTCCCAAAGATAACGTGCTTTGGGTAGAATGGACTGCTCCAAACGAATCTGTAAACAGATACATACTTGAGTGGTGTGTGTTATCTGATAAATCGCCCTGTATCCCAGACTGGCAACAAGAAGATGGTACTGTACATCGCACCTATTTAAGAGGAAACCTAGTAGAGAGCAAATGTTACTTGATAACAGTTACTCCAGTATATGATGATGGACCAGGAAGCCCCAAGCATATAAAGGCATACCTTAAACAAGCTGCACCTTCCAGAGGACCTACTGTTCGGACAAAAAAAGTGGGGAAAAATGAAGCTGTCTTAGAGTGGGACCACCTTCCTATTGATGTTCAGAATGGATTTATCAGAAATTATACTATATTTTATAGAACCGTCATTGGAAATGAAATCGCTGTGAATGTGGATTCTTCCCACACAGAATACACATTGTCCTCTTTGACTAGTGACACTCTGTACATGGTACGAATGGCAGCCTACACAGATGAAGGTGGAAAGGATGGTCCAGAATTCACTTTTACTACACCAAAGTTTGCTCAAGGAGAAATTGAAGCTATTGTTGTACCTGTTTGCTTAGCATTCCTATTGACAACCCTTTTGGGAGTTTTATTCTGCTTTAATAAGCGAGACCTAATTAAAAAACACATCTGGCCTAATGTTCCAGATCCTTCAAAGAGTCATATTGCCCAGTGGTCACCTCACACACCTCCAAGGCATTTTAATTCAAAAGATCAAATGTATCCAGATGGCAATTTCACTGATGTAAGTGTTGTGGAAATAGAAGCAAATGACAAAAAGCCTTTCCCAGAGGATCTAAAGTCTTTGGACCTATTCAAGAAAGAAAAAGTTAATACTGAAGGACACAGTAGTGGTATTGGAGGGTCTTCATGCATGTCATCTTCTAGGCCAAGCATTTCCAGCAGTGATGAAAATGAATCTGCACAGAACACTTCAAGCACTGTCCAATATTCCACAGTGGTTCACAGTGGCTATAGACACCAGGTACCATCAGTCCAAGTCTTCTCAAGATCTGAGTCCACCCAGCCCTTGTTAGATTCTGAAGAACGGCCAGAAGATTTACAGCTGGTAGATAATGTAGATGGCAGTGATGGCATTCTGCCCAGGCAGCGGTATTTCAAGCAAAACTGCAGTCAACATGAAACCAGTCCAGATATTTCGCATTTTGAAAGGTCACAGCAAGTTTCCTCAGTCAATGAAGAAGATTTTGTTAGACTTAAACAGCAGCAGATTTCAGATCATATTTCACAACCCTATGGATCTGGGAAAATGAAAATGTTTCAGGAAGTTCCTGCAGTGGATGCTTTTGGTCCAGGCATTGAGGGACAAGTAGAGAGATTTGAAACAGTTGGGATGGAGGATGCAGTTGATGAAGGAATGCCTAAAAGTTACTTACCACAGACTGTGAGACGAGGTGGCTACATGCCTCAGTGAAAGACAGTTCCTGTTACATCTTCAGAAGTACCTGTAAAGTAAAGCTAAAAATACTTTATCTGTGATTTCAGATCTTCACTCGCTGAAGATGGTCATTTGCCCTTAAGGACAAGAATGTACTGTCCTGCCACATGGGCTTTTTCCATCCCAGTATATCTGGGATTCAATTTTAAGCACTACATAAACTGACTTCATCCTCTGAATAGCTGACTGACTTTGTGCTGTTTCAGGATGTTTGCACTGAAGAAAAACAAAGCTTATCTAAAATTTATAAAGTGAAACTTTTTGTTTTGCTGTCTAGAAAACAGAGGGTATTTAAATTAAAGCTAGTCATAAACAGCTATACTGATTTTAATGAGAATAGTCATTGAATATCAAATCTTAGGGAGAGAATTAACAAAAATTAGAGGAGCAAGGTCTTAGACTCTCTACTTTAGCTGACAACATAATTTAAAAAGAATCCAGATGATGCAGCTAATACGAGCCCAGCTTTTGTTGTCTGCCAGAAAAAATTCAGGTCATTTATAATCATACCAACAAGTAAAATATTAGTCCTCTTCCATTGGTAGTGACACTGCCAGTTGCTGGAGAAAAGGAATTCTGTTTTAACACAGCAAACTAAAAATATCAATTTTTGAATATTAGACAATCAATAATTAAGGAAGTTTTCAAACATTTGCTTTCTATTGTTATTGACAGCCTTTGAAGATACACATCACAAACTCAGCAGAGTGTCTGGATAAGAGCTAGGAATGAATATGACAAACTATCTCAAACATTCTATACCTGTATATAAACTTTATTGACCCTTCTTTTTAAGACATCAGAGAATTTGGTTGATTAAGCACTTTATACAATATATCTTCACCTTAAAATGTGTTTTGACTTAATACACTGTTTTTCAGTAGGCCAAGATTGAGTTTGTTTTTTTCCCTAGTAGGTATCTAAAGCAGACTAATAAGTTATAGGACTTGGGCGATACTCACCAAAACAAAACACCACCCCCAAAATGTACATATTGATCTTAGTAAGTATCACAGTTAGCAAATACCCTTATTGTAGAGGCACTTAATGAAGAGATAGTATTTAATGTCTGCCAGTCCTGAGGTAGGTGGAACTTAGTTCCACACGATGATTTAGGAATATTTTAAACCTCTTCCCATATGTTCTGTTCTTCAGGGGGAAAGTGATTGAGCCTCCAGAGTTTAGTGCTAAACTCACTTTCACATTCATGTTATCCTCTACCCACCACCTTTGACAAGGAGGCAGGGCTAAAACCAGGGGCTGAGTAAGAAGAAATAGATCATGTATTGACTACTGCTATCAAGTAAGTTTGTTTCTCTGCCATATTTAAGATACAGAAGCCAGGGCAACTGAAAATATTTGCAGAGGTTATTGAAGAATAAAAGGTTGAGGAAATTTAGTGCACATTTACAGATGAGATGTGAGTCTACTCATTACTCTCTCATCAGTATTGTTCACAGTGGATTTCCTGTTATGCTTTATCCTTTGTATTCTTGCCTAACACTTCACAGAGTTCTTTCACATATATGCTCTTTGTGAGACAGAGCAGATGCTATATTCTGATATATCCAGTTCTTCTTTAGGCAAAACCAACAAGAGATTGGTAGACTGTCAGAATTATGAGGAAAAGTAGGGACAGACCCCAAACTCACACTCTACAAGGTAATAGCACCACCACCATTTAAGTTGGCCATCAAAGGCTGGTCCCTATCAGGAAAGGATTGGTCTTGCTAAATGTCAACAAATTTATATCTACTACATTTTTTTTATTTCCTCAAAATAAGTAGTCATGTTGTTATAACCATGTTTAGCTCTGACCTTCCTCCTAACAAATAGCAGTGTTGTGAAGAACATTTTAGTGTAATGATTATACATAGCGGGAGGGAAGTTATAAAATGTGAACTCACGATCTAAAGGAATGAGAACAGTTATTTAAGAAAGGACATCATTATAAGTAGATTTGATGTTGAAACTTAACATACAACATGGTGCAGTGAGTGAATGCCCTCTAACCACAAAAGCACTTTAGGCATATTAAATGGATGTTTGGATACTGTGCAAAAATTCATTCAGGAAATATTTATATACGTCTTTGCCCCAAAAGAGAAAAGCAGTCATGAAACTTGATCTAAGTACAAAATTACTTTCATAAGGCATGTTGTAGAAGAATCTGTTTTGATACATGTGAATTATACTTTAGGTCGGCAGAGAAATTAGGTTAATTTATGTGAAAATTAGACTGTGTTTAAGATAGTGGGTTTATTACTCATTAAATATCTAGTATCCAAAAGTTTGATGCAGTTACCCTCTTGTAAGATTAAAATAATAATCAAGAATATGTTACATTTGTTGTTACTGTAATTTGATTATTCATTACTGGTGTCTTTGATATCTTACCCTCATCCTTCATAAAGGCACGATGCTAAATAACTCTTGGAAAACTATCAGATTTCAAACCTACTAAAACCTTACAGTTTAATCCTTTTTTTAACATGGATCATTCATCGCTGGGGAATATACCCAACACATGAGCAGAAACAGGGAAAAGGCAGAGTCATTCACGTGTGTTGTGTTCACGTGTGCTCTTCACCTAGTTGTTCAAGTTCAGCCTTTTTCTTTGATGAGAGATTTTTTTTTTAACATGTGAAGTCATCCAGTGACCCTAGTTTATTGTGAAAACATTTATTTATGAAAATTCACATTGGAAGTAGAACATCTAAAATAGCTCTATAAATATCAATCAAACAAGTTTTAAAAAGATGTCTTTTTTCTGCTCACATAGTTAAGTAGTTAAATAATCATGACATAAATTTAGAAGTAGAATAATTATATAGTAGCATTCCCTAAAATATTTCTGTTAACTGGCATGTATTGACTAACTATAAATCAAGTAGGAAAGCTCTTCCTCTATTCCATTATATTCCACATCAATCTCTTCCTCTGGTGTCAAGAACAAATTTCTGTACCTTACACTTCTGTTTGTTGAGATGGGTAAAATGTCAACATAATAAGCTACATAAAACTTAAAAGTTCAGTTGTTTAAAAATATTGGGATAACTTTGTTGTAGGTTGTGTTTGATTCTGTTGCCCTCTAAGATTACTTTAAAAAGTTTTTTGCACTTTTTTTGTAAACTAAAAGAATATGAAGCCATACAATGGCAATATATTAGGTTTAAGAAGTTTTAAACCAGCAAACTTAACAGCCTAGTTCTTTAGACTGGTCCTTGATAGCAGTTCCTTTCAGGCTATTTATAAGCAGAATTTAGATGCAAGTCAAAACTTTCCAAATCCAAATACTGATCTTTGGAGTTAATCTATTTTTTTTTCATTGTATATTCTACTTGTATGTGTATTCACATGATATTCTAATATACATTGCATTAAAAATGAAAAGGTGGCTCTGGATGAGCCCATTTGTTACATATTTGTTCCTAAATTTTTAAAGGCTTTTTGTAGTTAAAGCAGGTTAGTTTAACTTAATTACCCAGTTCTTTACACTTCATAGATCATGATGAAAGTGCATTTGAGGCCAATAGTGGTAGATGTTACAGACCTTTTATCCCTTAAACATAAGCTTTGACAATGATAACTACATATTTCAAATGCTATTACATGAATATCAAAATGTGACATGTCAGAAATAAAGGGATAATTTAAAGGTGGATATTTGACATTTCTTTAGTCTTAGTATATATATATATGTTGAATAGTATACTCTAAAAATAAGTGTGCAATTTGCTAGTACTGCAGTACAGTGGTTAGCATTAGGTATGTCTCCTCTTTATACCTGGCTATGTCCCATTTAATTATAAGTGCAATCCTTTCAAGTTCACTTGCTCTTTTACCTTGACCTACTCTAACTTCATATAGAAGGCTTGTCTAGAAAGAGTAGTGTGTATTTTTACTTTTGCAGAATGAATTGCATGTGCAAATCGTAACCACAGCTATTGTTTTTATGTTGACATAACTAAATGTTCTCTCATATATCAGCTCTAATCCTTTAAGTAAATGTAATAAATTCTTCCTCAAATGTTTTCTGGGTGTGGTCACTACCATTTGACGTCATTACACATAATATTTAAGGTAATTTTATCATTATTGGTCTTGAGGCTTTGTGTAAGCTTGGTGCTTTTGGAGAGTTCTGTGGCTTCTGAATTCCTCATTTAACATAATGGGTCAGGATTTAGAAGAAAATCAATACCCTACCTCAGCCTTAATAAATACAGAATAGACTTGGAGATG EMBV3_26452 TATGCAGGTGGATTTGGGCTGTAACTTCTTCGTTGACACAGTGGTCCCAGACACTTCACG Gene GeneID:525680|UXT:NM_001037471:87_cdna Constitutive 2 NULL GeneID:525680 X GENE UXT MGC133475 ubiquitously-expressed transcript EMBV3_41048 CTCTGGGCTTGTGCTGTTGGCCTCTACATGGGCCAGCTGGAGCTGGATGTAGAACTGGTA Gene GeneID:508953|TMEM160:NM_001046019:157_cdna Constitutive 1 NULL GeneID:508953 18 GENE TMEM160 MGC140247 transmembrane protein 160 EMBV3_39372 CTTCTGTAACACTTGTATTGCTGGATGTGGAAACAAGGATTGCTCTGTGTCCTCACAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02226 CAACTAAAACTAAGTGGAAGTCTGTGCAATTGATGCCGCATTTCAGAATTGATTCCTGGC Gene BVV0101_023642 + 1 EMBV3_00795 GK000010.2:69777696-69862216 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17904 GTTCTTGACATCGAGCAGCGACTACGAGGTGTAATCAAGACCCGAAATAGAGTGACAGGG Gene GeneID:504869|ATR:XM_002685057:156_cdna Constitutive 0 NULL GeneID:504869 1 GENE ATR NULL ataxia telangiectasia and Rad3 related EMBV3_42269 TGTGGTGTCTTGGTGACTGTGGCCTGGGTAGGGTCTTGCGTTCATTCTTCAGCTCAGATT Gene GeneID:786506|LOC786506:XM_002692909:146_cdna Constitutive 0 NULL GeneID:786506 15 GENE LOC786506 NULL similar to Olfactory receptor 1209 EMBV3_38471 GCCACCAAGGACATACAAGTAGCATATTGATGACTTGATGATTTTCCCCAACAACTACTC Gene BVV0102_105587 + 0 NULL GK000002.2:8844554-8901431 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00101618 TCONS_00101619 1 XLOC_061720 Coding TCONS_00101619 XLOC_061720 Coding Coding TFPI 2:8786351-8886263 = TSS75895 3390 1 TCONS_00101619_2 304 8 0.966149873387315 0 0 0 0 0 0 0 0 0 0 1.90228922382833e-12 0 0 0 1.17859201023349e-12 0.0020552872809377 0.000358021366972208 0.00457352247383231 0 0 0 0.000518030475906462 0.0015800519835649 0.00111033869901297 0 0 0 1.66614953364349e-07 9.10252067453862e-09 0.000298215355446627 NM_001244204.1 TFPI Bos taurus tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) (TFPI), mRNA. 0.0 1963 99.91 0.321533923303835 NM_006287.4 TFPI Homo sapiens tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) (TFPI), transcript 0.0 1510 75.31 0.64188790560472 TCONS_00101619_2 sp|P10646|TFPI1_HUMAN TFPI1_HUMAN Tissue factor pathway inhibitor; 3e-144 413 74.17 0.990131578947368 1 coding 0 0 0 0 0.0504790470326807 0.700307697029784 0.0417402716078136 0.382836158101891 CAGGATCAGATTGCATTTCTTTCATTATTCTCCACGCCCCAGTTTCTCCATCTGTTTAAAAGAAGAAGTAGACAAGATAAATTCTCTCTTCGTTGCCTGGAAGGGAAAACAAAATGAACTCAATTCTACTTTGAAAAAATCTTTCTAAGAACTTTCTTCAGAGATATTACTCACATCTCTGAAATCTTCATTAACATAATGAAGAAAGAACAGATTTTGGGGGTTTCTGTATGTCTGCTGCTTAGCTGTGCTTCTGCCCCTCTCAATGCTGTTCCTGAGGAAGGTGAAGAATATACAAACATTACAGATGCTGAGTTGCCTCCACTGAAACCTGTGCATTCATTTTGTGCCATGAGAGTAGATGATGGCCCATGCAAAGCAATGATAAAGAGATTTTTTTTCAATATTCATACTCAACAATGTGAAGAATTTATATATGGAGGATGTAAAGGAAATCAGAATCGATTTGAAACTCTGGAAGAGTGCAAACAAAAATGTACAAGAGATTATCCAAAGAACACGCGAAAGATGAAAACAACACTGCAAAAAGAAAAGCCAGATTACTGCTTTTTGGAAGAAGATACTGGAATCTGTCGTGGTTATATCATTAGGTATTTTTATAACAATCAATCAAAGCAGTGTGAACGTTTCACATATGGTGGGTGTCTCGGGAATCTCAACAACTTTGAATCACTAGAAGAATGCAAGAACACCTGTGAAGACACATTGAATGATTTCCAGGTAGATGATCATAAAATCCAGGATAATGCTATGAATAATGCCTCCTTGACTCCCCAGCCTAGCAAGGAACCCAGCTCCTTTGAATTTAATGGCCCCTCCTGGTGTCTGACCCCAGCAGATAGGGGATTGTGTCAAGCCAATGTGACCAGATTCTACTACAATTCAGTCATTGGGAATTGCCTCCCATTTAAATACAGTGGATGTGGAGGGAATGAGAACAATTTTACCTCTAGAAAAGCATGCGTTAGGGCTTGTAAAAAAGGTTTCATCCAAAGAATATCAAAAGAAGGATTAATTAAAACCAAAAGAAAAAGAAAGATGCAGCGAGTGAAATTAGAATATAAATTTGTTACATTACAACATTATTTCTAATAAACATTTTGGACAAACATTTTCATTGTGATTCTTATTGTTTCTCTCCTGAAATCTTTTTAATGAAAATCTCATGAATCTTCTATGCATATATTACCTGCTATTAATACGTTTACATCAGAGTTCCTTTTCTAATCTAATCAAATTGCTTATTCTGTGGCTATAACTTATTAACTGTCTACCATGAATTTATTATTCTCTTGATTCCTTTCTAACTATCTGCCATTTAACTACAATTTATCATACTGTTGGCCCCATCGAGTCAGTCTGTTTTACCATCTGGTGGTTATCTGTTTGAGAATATGTCATCACTTATTTGTTTTTATCACATATACAATTATATTCTTTATAGCCTATGTTCAGATTAACAAATATAACTATTAAAGATCAAGTGGTTTGGGGTTCAACATTTAAAATGGTGGCAAGCATCTTTTTCTGATTAAGATCACTCAATATTACATTAGAAAGAGCTAGTAACAACAGAATTCTACCAGATGATTCACTCCCTAGACATACTTTGCTCCTTTTACACTAACCACCGCTTCAAACAATCCTAAGCCAAATCATATCTGAACAAAGAGAGTCAACTCTGTGTCATGTGCCTGCCTGATTTTGATTGATGTAACTTTTGTGTGCTTCTGGCCCATCTTATCAGTAAAGAGGGTTGAACAGTTGTGTGTTAAATACAGATCATGATAAGAAAAGTCCTGGTGGAAAAGAGAAGTTTTTAATGACAACCTGAAAGAAATTATTTATGTACTTTCTAATTTTATTGTTTGACAAAATTTTCTCTTCCCCAAAATGGCAAGAATATATAAACCTCCCGAAACCTATTCATTTATAATTAGGCTTTGCACACAATGCAACCAGTAATTCATGCTTTAATAAATGTCATACTATTTCTGTAAAACAGGAAGACAAAATTATCAGGAAGGAAAAGTCTCCTAGAAAAATGCGCATAATTCACTCTCAAGCTTTTAACATTTATCTGGAGTTAATTCAGTTTATCTAGATCCATACCTTTCCTTCTCTGCTGAGTCATGTATAGTTTGAGATCTCAAGAGCCTTGTTCACTGCAAATTTCACATTTAAATTTGAACTTGTCATCTAGAAACAACTAACCACTTTGTCCATTTAGTTTAGCTTAATGACTTCTTTCTAGTAATAGCAAATAAATTCTGCTTGTTCCTCAGTCTTGAGAGTTTGAACCCAATTTTGATTTCTTCTTTTCCCTCATATACAGCTTATAATCAGTCTCTAAACACTGTTGATTGTTTTGTCATAAAGTTCATCTAACTCCCAGTCTTTTTATCTCTACTTCATTCTTCACATCATTACTGATTTAATTCTTAAGAATTAACTTGTGTGTTTCACTACTACTCAGAATCCTTCAATGATTCAGTAATTGGTACTTAACTTCACCCTATCCTCCCAATTTAATTTTGATATATGTATGTATTTGTACTTACCTACACTACTCGTTCATGACCATCTCAGTTTAGTTAAAATGGTACTCATAGATCACTGAAAGTATATCTCATTACTTAGTTTATTCATGCTGATTTCATATTTTTAAAATGTGATCCCTTCCAGATCATTCATGTGAAATCAGACAAGCTGATGTGAACTATAAAATCACTATCTTTTGAGGCATAATATGAAGAATCCTAATATACATCCTATGTCATAAAAATTGTATCAGTACAAAATAATGTCAATTTTTTCACGTGAGAAAATTTTTATATCTTGTTTTCAAATATTCAGTACATAAGCACATAAATAACTGCCTTAAATTGAGTCTTCTATGGAATTTGAAAGGTTTTGAAATCAAAATCTCTTGTGAAATATGTCTGTTGTCTTTTATACATGGATAGCAACACCTTTAAGTAAATGTAAAGTCTTCTTAGGTCAAGTGGCAAGTTGCCACCAAGGACATACAAGTAGCATATTGGTGACTTGATGATTTTCCCCAACAACTACTCATAACTTCATTACTTAGTCAAAAGACATACACTGAGAGATGGTTTGCAATGTTTAATGCATGTGAATATGTTTACTGTGTTTTTAAATAAGATTGTCTCTGGTGGTTTTGTCTTCCCATATTTTGCATAATCAAATGCATCTAACTGTGAATTTTATATAGAATTACATTATATAGCATCTGATGCTTATTTACCAACTTTGTTTATTCTGTTTAAAATTAACAGGTTATACTGAAAATTGATAAAATGTTTTCATTTTTTACTGTATAAGCAATAAAATATATTATCCTAAATA EMBV3_35548 GTTGTAAAACACCCTCTGACCCAGGAAGTGAAAGAATGTGAAGGGATCGTCCCGGTGCCA Gene GeneID:615431|MRPS6:NM_001040584:55_cdna Constitutive 1 NULL GeneID:615431 1 GENE MRPS6 MGC128347 mitochondrial ribosomal protein S6 EMBV3_26713 TGTGCCTCAGCCTGCGTGAGCCCCCGGCCGACCTTTGGTAACCTCCTTCACTGGGAAATA Variant GeneID:538517|ARRDC4:XM_002696505:90_cdna 293^359 1 EMBV3_23530 GeneID:538517 21 GENE ARRDC4 NULL arrestin domain containing 4 EMBV3_11265 CATCTTTGGATCGCCCATGTACTGCTGACCATATGCCTTCCCCTTCTTTCAGAGATACTC Gene GeneID:505865|FOLH1:NM_001101858:14_cdna Constitutive 0 NULL GeneID:505865 29 GENE FOLH1 MGC152047 folate hydrolase (prostate-specific membrane antigen) 1 EMBV3_19476 GAGAATAGGACACAAACACCAGCTATTGCCTGCATTTGGGAAATTGCTGAATCGCACAGC Gene GeneID:781067|JMJD1C:XM_002698853:69_cdna Constitutive 0 NULL GeneID:781067 28 GENE JMJD1C NULL jumonji domain containing 1C EMBV3_27743 GGATTCGTTTGGGAAAGCATGGTGTTCACTGACCCGGAATTATAACAAGGACAGGGTTTG Gene BVT0102_243218 + 0 NULL GK000018.2:55212411-55278947 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00086981 TCONS_00086980 1 XLOC_052310 Coding TCONS_00086981 XLOC_052310 Coding Coding LOC100847317 18:55257414-55265277 = TSS64640 378 1 TCONS_00086981_3 125 4 0.952429407275502 3.59767225700147e-05 7.9736588738364e-05 0.000587546968206883 0 0.000156731852994501 0 0.000107988500468422 3.12900270746214e-05 0.000521802605931012 0 0 0 9.8676640685122e-05 0 2.59564403717293e-05 0 0 0 0.000663960885298399 0 0.000161635511696092 0 0 0 1.38960166989441e-07 5.59065967864155e-05 1.34711382642792e-05 0 0 0 XM_003583452.2 BSPH1 PREDICTED: Bos taurus binder of sperm protein homolog 1 (BSPH1), 7e-156 553 98.75 0.841269841269841 NM_001128326.2 BSPH1 Homo sapiens binder of sperm protein homolog 1 (BSPH1), mRNA. 5e-69 264 79.08 0.806878306878307 TCONS_00086981_3 sp|Q075Z2|BSPH1_HUMAN BSPH1_HUMAN Binder of sperm protein homolog 1; 1e-53 169 67.33 0.8 1 coding ATGGCCCTGCCCGTGGGGCTTCTGTCGGTCTCGGTCTACTGGCTCCACAGCGTGGCTGGTCTCCAACATGGAGAGACTGTAACTCATCTTCCAGAAGTCAAAGAGGGCAAGTGTTTCTTTCCATTCCGCTATAGAGACGGGATCTTCCATGACTGTGTCCAGTTCAGGGTAAAACACAAGTGGTGTTCCCTGAATGAAACTTACCAAGGATACTGGAAGTACTGTTCTGAAGAAGACTTTGCAAAATGTGTGTTTCCCTTCTGGTACAGACACCTCATTTACTGGGGATGTACCGAGGACGGGGATTCGTTTGGGAAAGCATGGTGTTCACTGACCCGGAATTATAACAAGGACAGAGTTTGGAAATACTGTGACTGA EMBV3_26106 ACACTGCGTGCAGATAAGGAAGTACAAGGAGCTCACTGGCTATGCTCCAGCAAATGGAGG Gene BVT0102_314452 - 1 EMBV3_28923 GK000026.2:38657254-38923064 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00152321 TCONS_00152320 TCONS_00152318 TCONS_00152319 TCONS_00152322 1 XLOC_092309 Coding TCONS_00152322 XLOC_092309 Coding Coding FAM204A 26:38922686-38951682 j TSS113627 1361 1 TCONS_00152322_1 114 8 0.953336782203828 0.000668995632182934 0.000467070579937178 6.47875978239322e-05 1.0993547880174e-16 7.10648092165142e-09 2.64917074707008e-08 2.13538157345132e-11 1.6549784582505e-08 1.22166958377411e-08 0.00161160454259998 0.000325965162839071 0.000664175068853955 0.000180544071687156 0.000938823124798133 0.000128197630019697 0.00196684491996137 0.000218296164425882 0.000269694843297792 0.000312132401993175 3.8660005549527e-11 1.55360892880521e-09 0.000617177988266178 0.000544275262494346 0.000855664894636335 1.12874560089591e-09 8.04873852592157e-12 6.04893830561192e-16 0.000142700937824201 0.00023731756788632 0.000256066931236847 NM_001035052.1 FAM204A Bos taurus family with sequence similarity 204, member A (FAM204A), 0.0 1481 98.24 0.626745040411462 NM_022063.2 FAM204A Homo sapiens family with sequence similarity 204, member A (FAM204A), transcript variant 1, mRNA. 0.0 996 80.29 0.781778104335048 TCONS_00152322_1 sp|Q3ZCI6|F204A_BOVIN F204A_BOVIN Protein FAM204A; 4e-75 226 99.09 0.956140350877193 0 noncoding 1 1 1 1 -0.114994305495594 0.340862765528439 -0.00263985599564964 0.966097403944353 NGTTGGTGGGAGAGGAGTTCTCCGTCCCACCCCGGCCGGAGTGAGACGGGATTAGGCTTTCGACCCGGGAAATGGGCTCTTGTTTACAGTTGCCGTACCCGGAAACGAGCTGCAGTTGATGGGAGAGTCAGCAAGAAAAGATGTGGAGTGGGCTGTTACCTCCTGGCCTAAATGAAAGTGATGTTGAATTGAATTCTGACGATGATACCACATTAGAGAGCTCTGAACTTAACTTACAAGAGGGTAAAGAAGATGGGACCTTTGAAAAGACAGAGATGGTAGATATTCCTACAGATGGACCAAGCACTGAAGCAGAGGCAAATATAAATGCATATGAAGAGTGTCCCTCTGGAATTCCCTTAAATATGTGGAATAAATTTCAAGAATTGCATAAAAAGCATTCTGAACAGAAAACTTCAGCTTCTAGATCCGAAAAGAAAAAAAGAAAACGCTCCAGAAAAGGTGTTTTAATTCAGGTAAATTGAAGAATGAAGAAGAATCTCATAGTGAACAATCTTCAAGTGAAACCCAGTGGAAGGAGCTTACCCAGTATTTTGGAGTCAATGAGAGGTTTGACCCCCCTGTTAAAAGGAAAAAAGTTGAAAAGTCGGGACTTGAAAAGAGGATAGACCAAGCTGTGGAAGAGTGGAACATTGAGAAGGCCGAGGAACTCAGCAACCAGCTAGCTACTCGTGAGCTTGGTGTAAAAATTGCCAAAGCTATTGCCTGCCACAACTTCGTGAAAGCCAAAAAGGAGGCTGAAAATTCACAGGTTGCACGAAAAAAGAAGAAACTTGCCTGGGGATTTGAAGCAAAGAAGAGGTGGGAAACCAAAAGCAACATGGGATATATGTGACTTGCCAGAGTTCTTCAAGACCTTTGAGGCTTCACTCGAGTCTTCAGTTGCTCAATTTACTAAAAAAGATTTTGTCAGAAAATTGATGGAAGTAGAAAAAATAAGCATAAAATTTGGGAGTTGATTATCAAATCGTTTTTCAGTCTTTTTCTAAAGAGTCCATCCCACTGAAGTGAGTGAAGTGGACCATCCCGTTATTTGTGCAAGTAATCTAAGCATATATACAGGGGGAAAAAAAAGATAGGATGTATTTATTTATTTATGTAGACCTCCAGTATAGAATCAGTTTTACTTTTCCTCCATTTGCTGGAGCATAGCCAGTGAGCTCCTTGTACTTCCTTATCTGCACGCAGTGTAACTGCACTCACTCTGGAGCTGTTTTTAAGATGGGCATTTGTGTATAATGGATTAGTCATAAGTGCAAGAAAGATCCTGTGTTTACAAATGCCTTTATCTTAATGTTACAAAAGTAATTATCGGTTCTTTATTGTAGGCAGTAGAGTTG EMBV3_25214 AAACCCCTCATTGTCTTGGTGATTCGAACCCTTTTAATTGTGTTGCACTAGACCAGAGAG Gene BVV0102_212854 + 1 EMBV3_15350 GK000009.2:19368401-19480888 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02836 AGGCCTGGGATGGCTGAGAAGGGTAGGGCATCCCTTTCCCATAGTTTTGGGGTGTAATAA Gene GeneID:286838|NDST2:NM_174777:248_cdna Constitutive 1 NULL GeneID:286838 28 GENE NDST2 MGC154982 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 EMBV3_35625 TTGAAGTGCCTGGAGCACCTTTTCTTCTTCAAGCTCATCGGGGACACACCCATTGACACC Gene GeneID:509500|RXRG:NM_001075408:11_cdna Constitutive 0 NULL GeneID:509500 3 GENE RXRG MGC143016 retinoid X receptor, gamma EMBV3_15605 TCTGCTTCTCGGCCATCATATAGAGGTTGTGGCAGTTGTAGATGTACTCCTGCTTGTGCC Control NULL NULL 0 EMBV3_35086 NULL NULL NULL NULL NULL NULL EMBV3_08090 CTGAAACCAGAGTCTCCCCGAATGCTAACCTCCCGACCGCCTACATTTCAGCTGTATTTC Gene GeneID:617577|C6orf25:NM_001078081:210_cdna Constitutive 0 NULL GeneID:617577 23 GENE C6orf25 G6B chromosome 6 open reading frame 25 EMBV3_00475 TGAATCCACTGTGGTTCAAACAGCACTGTGCCATACACACTGCTGCTATGGATATGCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21102 GGCAGAGGGCAAGCGAGAGTCACAATTTTGGAAGCCCCTATGGGTTATACTGAAGTTAGC Gene BVT0101_068483 - 0 NULL GK000018.2:36365836-36449382 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05945 TCCTGCACTACAGAGGACAGACTGTGAAAGCTGCTCCAGGCAGCCACCAACTACCGCAAT Variant GeneID:504961|MPDU1:NM_001075179:469_cdna 394^512 2 EMBV3_32959 GeneID:504961 19 GENE MPDU1 MGC140587 mannose-P-dolichol utilization defect 1 EMBV3_08060 TCAGATGTGAAGCAGCGTGGATTTATGGGAACAGGTCGCAGTGGGTGATGTATGCCCCTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01668 ACGGAGAACTGAAGAGATGGTATTTCTGACTCAATCTTGCCCACCAGAACAGTGGCAGAG Gene BVT0102_007353 + 0 NULL GK000014.2:15348119-15395083 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14312 TATGACATCCCGCCGTAGTGGAGTTGGCCTGGCAGTAGTGAATGGACAGCTTATGGCTGT Gene GeneID:511387|KLHL20:NM_001076835:94_cdna UTR3_Alt 3 NULL GeneID:511387 16 GENE KLHL20 MGC142776 kelch-like 20 (Drosophila) EMBV3_05593 TATGTGCTGGGATACCACGTTGATTGAGCAATATTCTGGGGTGTGTGAAATGGGTGGTGG Gene GeneID:503575|ARHGEF12:NM_001123033:50_cdna Constitutive 0 NULL GeneID:503575 10 GENE ARHGEF12 LARG Rho guanine nucleotide exchange factor (GEF) 12 EMBV3_12673 TTACAGAGATCGCCGGGCTCTCCTACTCAGATCGATAAAAGCCCAGAAGGACAATTCACT Variant GeneID:514330|LOC514330:NM_001079774:116_cdna 638^783 1 EMBV3_37689 GeneID:514330 22 GENE LOC514330 NULL MMP37-like protein, mitochondrial EMBV3_42404 CGAAAGTATTATCCCCAGAGAGTAAACAAGACCTTTGGGCACTTGGATGCATCATATACC Variant GeneID:100138102|PDPK1:XM_002697862:368_cdna 821^901 1 EMBV3_10052 GeneID:100138102 25 GENE PDPK1 NULL 3-phosphoinositide dependent protein kinase-1 EMBV3_21374 GAAGAAGGAATACATGATAAAGTAACAGTATGATTTCTCTTTTATTGTACACTGCTTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14979 CTATGCCGTGCTGGTGCACTCCGGGTGGAGCTGTGAGCGAGGACACTACTTCTGTTACGT Gene GeneID:789329|LOC789329:XM_002707783:170_cdna Constitutive 0 NULL GeneID:789329 3 GENE LOC789329 NULL similar to ubiquitin specific peptidase 17 EMBV3_27654 TGAGGCCCATCAAAGTGGACAGCCAGGAGCATAAGATCACCCTGTATGAGAACCCCAACT Gene GeneID:287011|CRYBB2:NM_174807:23_cdna Constitutive 0 NULL GeneID:287011 17 GENE CRYBB2 NULL crystallin, beta B2 EMBV3_17343 TACCCAAGGACGTCAACGCCGCAATTGCTACCATCAAGACCAAGCGTACAATCCAGTTCG Gene GeneID:535605|TUBA1D:NM_001046410:104_cdna Constitutive 0 NULL GeneID:535605 2 GENE TUBA1D MGC138024 TUBA3C TUBA3D tubulin, alpha 3d EMBV3_00051 GAAACCTTGCAGCTGTACCCTGATGCTGGATGGCACTTACCTTGTGTGGTCCTAAATTGG Gene GeneID:281274|LDHA:NM_174099:4_cdna Constitutive 0 NULL GeneID:281274 29 GENE LDHA NULL lactate dehydrogenase A EMBV3_15091 TCATCTTTGTGGAGAAACAGAGTATGCAGAGGTTGCAGGAGACTGAGATGTGGCCTGAGC Gene GeneID:533578|NUDT22:NM_001038680:57_cdna Constitutive 3 NULL GeneID:533578 29 GENE NUDT22 MGC134340 nudix (nucleoside diphosphate linked moiety X)-type motif 22 EMBV3_35740 TGAAAGTGAAGGTCCAGAAAACCACATGGAAAAGGACAGCTGGAAGACCCTCAGGACCAC Gene GeneID:514877|RASGEF1A:NM_001015601:8_cdna Constitutive 0 NULL GeneID:514877 28 GENE RASGEF1A NULL RasGEF domain family, member 1A EMBV3_34229 CAAGAAGTTCACGTTCGTCTGCATGGCCTTGTCGCTGACGCTCTGTTTTGTGATGTTCTG Gene GeneID:511800|ANKH:NM_001109793:14_cdna UTR3_Alt 2 NULL GeneID:511800 20 GENE ANKH MGC166183 ankylosis, progressive homolog (mouse) EMBV3_31477 GGTTTTAGTAACATGGTCCTTTCTAATCTCTCCCCTGAGGCATTCAGCCACAGCTACCCG Gene GeneID:536532|TAOK1:XM_002695674:192_cdna Constitutive 0 NULL GeneID:536532 19 GENE TAOK1 NULL TAO kinase 1 EMBV3_04941 CGAGATCAAAGGCCACGACAGCCCCATCAACGCCATCTGTACCAACAGCAGGCATATTTT Gene GeneID:100337196|LOC100337196:XM_002694241:195_cdna Constitutive 0 NULL GeneID:100337196 16 GENE LOC100337196 NULL Kinesin-like protein at 3A-like EMBV3_20225 CTCATCGAGGGTGTTGGCATCCTTCTCACTCGCTATACTGCCCAGCAGTTCCGCAATGCA Gene GeneID:540765|TIMM17B:NM_001046488:111_cdna Constitutive 0 NULL GeneID:540765 X GENE TIMM17B MGC128816 translocase of inner mitochondrial membrane 17 homolog B (yeast) EMBV3_39814 GTTCGCCCATCGTTGAACACTTTTAGGTTCTGTCCTTGCACCTGTTCACTGGTACCCTCT Gene GeneID:504472|DNAJC13:NM_001113745:16_cdna Constitutive 0 NULL GeneID:504472 1 GENE DNAJC13 NULL DnaJ (Hsp40) homolog, subfamily C, member 13 EMBV3_33815 CTGCAGTTACACCAAGGCATGTTTCCCCAAGCGATGAAGAATCTGAGGCTGGCTTTTGAT Gene GeneID:616050|SMYD3:NM_001076406:113_cdna Constitutive 0 NULL GeneID:616050 16 GENE SMYD3 MGC142645 SET and MYND domain containing 3 EMBV3_01365 GGATTCCAGAATATTAAGTCACAGCCACACCTGCCCCTGACCCAGGACAAAGGTCCTCTA Gene BVT0102_063506 + 0 NULL GK000025.2:34156684-34163443 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145223 TCONS_00145222 TCONS_00145225 1 XLOC_088769 Coding TCONS_00145225 XLOC_088769 Coding Coding TBL2 25:34151409-34159654 j TSS108872 4793 1 TCONS_00145225_3 395 0.332776966409347 6 0.419335274138768 0.00124587162471568 0.0018971539838818 0.00154370878687416 0.000257206940173023 7.80384238550273e-07 0.000257444024473856 0.000665802714518733 0.00101128172151228 0.000345085669444914 0.000561926972470838 1.81456378525137e-05 2.4933337467084e-05 1.10703603434931e-08 0.000107758610959506 5.43465264472892e-05 0.00373259264130951 0.000811405442864733 0.00224049737087898 0.00336009524932781 0.00459807899769427 0.00100909216597544 0.000416463950076669 0.000302059703566924 0.00138590357296231 0.00289234787947465 0.0014953737413769 0.00194594202174959 0.000364372043750259 0.00020284177352986 0.000762282178685093 XM_005225082.1 TBL2 PREDICTED: Bos taurus transducin (beta)-like 2 (TBL2), transcript 0.0 6183 100.00 0.715001043187983 XM_005250263.1 TBL2 PREDICTED: Homo sapiens transducin (beta)-like 2 (TBL2), transcript 0.0 944 87.88 0.156478197371166 TCONS_00145225_3 sp|Q9Y4P3|TBL2_HUMAN TBL2_HUMAN Transducin beta-like protein 2; 0.0 654 78.08 0.99746835443038 1 coding 1 1 1 1 -0.292697199818113 0.117032759574233 0.0178358257640491 0.695890409231602 AGAGGCTGAGGTGGCAGTGGTCCTGCGGACATGGAGCTCCCGCAGATGCCGGAGCTGATGGGGCTGTCGCTGTTGCTCGGGCTGCTGGCCCTCGTGGCGACGGCTGCGGTAGCGCGGGGGTGGCTGCGCGCGGAGGAGGAGACGAGCGGCCGGTCCGCCGGCCAAAAGGCAAACGGATGTCCACCTGACAAGTCCTTGAAATCCAAGAAGCAGAAACTGCAACAGCGGATTCGCAAGGAGAAGCCTCAGCAACACAACTTCACCCACCGCCTTCTGGCTGCAGCACTGAAGAGCCACAGTGGGAACATAACTTGCATGGACTTCAGCAGCAATGGCAAGTACCTGGCTACCTGTGCAGACGACCGTACCGTCCGCATCTGGAGCACAAAGGACTTCCTGCAGCGGGAGCACCGCAGCATGAGAGCCAACGTGGAACTGGACCATGCCATCCTGGTGCGCTTCAGCCCTGACTGCAGAGCATTCATCGTCTGGCTCGCTAATGGAGACACCCTCCGTGTCTTCAAGATGATGAAACGAGACGATGGAGGCTATACTTTCACGGCCACCCCGGAGGACTTTCCTAAAAAGCACAAGGCACCCATTGTCAACATTGGCATCGCTGACACAGGGAAGTTCATCATGACTGCTTCCAGTGACACGACCGTCCTCATTTGGAATCTGAAAGGCCGGGTGCTGTCCACCATCAACACCAACCACATGAGCAATACATATGCTGCTATATCCCCTTGTAGCAGGATGGCCTCTGTCTCCAAGGACGGCACGTGGAAACTGTGGGACACAGACGTGGAATACAAGAAGCAGCAGGACCCCTACTTGCTGAGGACAGGCCGCTTTGAAGAAGCGAGCACCGTGCCGTGCCGCCTGGCGCTCTCCCCTGACGCCCAGGTCTTGGCCTTGGCCAGCGGCAGCAGTATTCATCTCTACAACACCCGGCGGGGTGAGAAGGAGGAGAGCTTCGAGCAGGTCCACGGGGAGTGTATCAGTGACTTGTCCTTTGACATCACTGGCCGGCTTCTGGCATCCTGTGGGGACCGAGCAGTGCGGCTCTTCCACAACACGCCTGGCTACCGGGCAGTGGTGGAGGAAATGCAGGCCCTCCTGAAGCGAGCCTCCAACGAAAGCACCCGCCAGAGGCTTCAGCAGCAGCTGACGCAGGCCCAGGAGGCCCTGAAGAACCTGGGGGCCTTGAAGAAATAACTGTGGGAGGAGGGACAGTAGGAAGGATCTGACCTGCTCTCGTCTCCACTGCTGCCGTTTCCCTGGTTCTCCCCCAGTGGAAGCCTTTTGAAAGGAGTGTCCTGATTTTCCTAATGGCAGCTTCTCTCTCCTTTTCCCCACTGAAACTATTCTGGCCTACTCAGATCTCTCTCTCTCCTTGCTGGTGATGATTCCTGGCCCACTTAACAACCTCCCAGGCTAATGACCAAGGTGCTTTTCTTTTTCCTGGGCCCAAGGGGTGGAGTCTCTCTTCACTAGGCACGGAGGAGAGTGGTAATTAGAAGAGAGGGAGCACATGGTCTTTGACCTTGGGACAACACACCCTGCTATCCAAAGGAGGCAAAACCCAGGGAAGACCTGAGTGCTAAACAGCAGTCTTGCAGGGGTGGGAGACTGAGATTCCTTCCTATTCCAGAACTGGGGAGTGGCTCAGGGAAAGGCTGATCTTAACCCAGGCAAAGCGCCTAACTTCATCCAGAATTACGGGATTTCATTCTGTGCCTCAGTTTTCTTACTTGTCAAATGGAGAATAATTATCTTTTGACCTTCCTAGATTTGAAAGAAAAATGGAAAAGAGTCATAATCTGTTATCTGTTGTCGAATATCATTTATTAACTACTGAGTAAAACTGGGACTCAAACAGGGCAGTTTGAATCTCTTGGGAAAGCTAAGCTTCTGGGATTTGATTGATGGTACATTTCGTATCTGCTTCTGCTTTAAGTTGGGTGGAGGAATCACAGAATCCCAAGGTAGGGCTCTTCTCTTCCAGGAGGTTATATCCTGTTTGAGGAGAACCTCTTTTCAGGTCATCCAACATTTGCTGGCCTATTCTGTGCCCAGTGCAGCACGGACACTGGAGATAAATATGAATAAGACATGATTTCTGCCATTGAAGATGGCTGGTGGACGAAAGGTACACAAGTCTGTGAAGTGATTTTTGTTAGTTTATTCACAGCTGGAGAAGGCTGTGGTAAAAGTCAAGGCAAGAGAGAGGACTGAATCAGGACAGAGGCAATGGCGTTGAAGGGATAGATTGAATAGATTGGGTATTTAGAAGTTCACATTTTTGGATTTTGAGGACTGCTTGGATGGGAGAGGTAAGGGAAATGAGGAATCTAGGCAGACTTGAGCCTCAGCAAAATTTATCCAAAATAAATTCTTCCCTCTCCCTAAAACTTGGACCTCCCCTAATCACCCCCAACTCATATAAACATGTGAACAAATCACAGCATTGGAGTTTTCCTCAGTTACTCCCTTTTCTACGCCCCCTCTGCCCTACTACACGATTACCATCCACTCCACCAGAAAATTCTTTGGGTTACATGGCAGTAAATCCTGAATCTGTTACTCCTCTCCATCTCTTCTGATACCATCCTGGTCCTAGCCACTGTTACCTACAGGGCCACTATAATGTAGCTTCCTCATTGGCCTTCCTGCTTCCTGGCTTGCCTCGTTAAGTCACTCTTGTACATAGCAGAGTGATCTCTGAAAAATGTAAAGCAGATCACATCATTCCCAAGTTAGAAACCCTCCCAAGACTCCTCCTCACACTCGGAATGAAATCCAAAATTCTCACTGTGGCATACAAGGCCCTGTGTAATCTGGGTTCTTCCTCCTGTGATCTTGTTACCACTCTCCCAGCCGTGCCACTCCTCCAACCAAGCCAAGTTATTTCCAGCTTCAAAGGGGACTTGTGCCTCTGTTCTTCCCTCTGCTTAGAAGCATTTTTTTCCCTTCTCTTGGCAGACTTGCCATGCTTGTCATAATTCAGTTCTCAGTTTCAGTTACACTTTAGAGACCCTCCCTGACCACTCAATCTGAAGTAGCCCTTTCCACCAGCCATATCACATTAGCTCATTATATTTTAGTTTGCATTACTTAATGCTATCTGAAATTATTTTGTTTGGATATTTGTTGGCTTCAGGGGTGTCAGGTGGGTAATAGAAGTAGGTGAGTTGGGCCACAGTTGTCTGGGTGAAAGACAGTAGGAAAAGGTGGGAACTGAAGTCATCTCTAGAGGACCTTTGTCCTGGGTCAGGGGCAGGTGTGGCTGTGACTTAATATTCTGGAATCCAGTAGAAGTTGCCCATTTCAGAGAAGCCAGAAGTTGGCAATTTATTTTCAAAAGAAAAATGTTAAGCACTGTAGGAACCAAACAAAACACTAATGGCAGGATGCAGCCCAGCAGTCTCTCATTGGCAGCTTTTGGGTTGCTCATTAAGCCACTGGAATGTGACAGGAATCCTTGTCAGATTTGCTCCATGTCCCACACACACTGCCTGGAATAGAGTAAGCGCTCAATAAGTGTTGAATTCGAACCAGGCAGCTAACAGAAATGTCAGTACCCTCTCTGCACTGTGGTTTGACGTTCCTAAGAATAGACTTCTGACTGATAATACTGTGCACCTGGGTCCTGGTGAAGCTTCGCTTTCTGGTTGTCAGAAGAATGAGACTAAGACACTTTGCATTCCTGCTTGGCTCTGGCTTTGCTCTGATTGCATATCCAGGAGGGGCAGTGATCGCAGGATGTTGAGTTACTGAAGTCAGAAGTCTTTGGTTCCAGTTTCAGCCGGGGCACTTGTTGAACAGACACATCACTTCACCTCTCTGAGTTTGTTTCCTCATCTGTAAAATGGAAATAAATCTGGCCCTTCATGCCTTGCCAGGGCTATGAATTTCTAATAAAATGAATGAAAACACTATAGAAGAGTCATTACAGAGATGTCCTGGGGACAGAAAACAGCTCCTCTCAGTAAAGATGAGGCTGCTTCCCTGTCAGCATGGCGAAAGTTACCTGGATATTCATGTAGCCCAGAGGCCACTATGTTTTTTTGATAAAAAATCCTTGTGTGTGAAGGCAGTGTTAATACTTTAATATTACTATTTCAATTTATGTGGGTTTGAAAGTTTTCAGAATAAAAATTTGGGGAAATTTAAAAAAATGGTATCCAGATTATTTTTATCAGTCATTAAAAATAAAAATACTTAAAGCGCAAAAGTGCACATCTGAAGGTCTGTTGATAGTCTTCATCAATTTCAATTAAGGTAATAAGACTTGTCTTTAAAAGATGTTTTATAATTGGAGATTACAGCAGGTAAGTAGGAAGCACACACTGTTGTGTTGAGTTATCAGTGATGGTATGCTATAGACCCAGCAGTGCCCCCAATTGGCCATGTGTCTAGAAACTTAGTGATTTGGGATTCATGTTCTCTACAAAACTCCAGAAATAGGAGTCTTCCAGGTGAGCGTGACTTGGTTTCAGCACACAGCTCTTGAGACTGAGACCCACTGATGACACAGGTTGGCACTGCAGAATTAGCCGTAGACACTGAAAGCATGATTCATAAACACAAACCTGGGGACGCCTTGTGAGACTGTGACTGTGTGAAGCTTGCTTTCTTCAAGCTTCCAATTCTGATCCCAGAGTTCAGGGCAGTAGGAAAATGAGTGTGCTCTCCAGCTGCTCTCTGTTCAGCAGACACAGTCTGAGTGTGTTTGCATTTTCTTGTTCACGTTAATAGTGGCCCACATTGAGTGCTGAGCCTTCAATCCC EMBV3_35403 GTTTCAAGTGGCCCAAGCAGTTGCACGTCAGATCGCTATTTTCATTTAAGACAAACAAGG Gene BVV0101_011617 + 1 EMBV3_15660 GK000020.2:63677448-63975011 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118060 1 XLOC_072226 NonCoding TCONS_00118060 XLOC_072226 NonCoding NonCoding - 20:63775552-63776094 - TSS88528 542 1 TCONS_00118060_1 53 1 0 0 0 0 0 0 0 0 0 0 0.000136643977671777 8.44717111449298e-06 0 6.88205922163773e-05 8.67895787409776e-06 0.000108624450835598 0.000389839069670107 0 0 0 0 0 0 0 0 0 0 0 0 8.95686350601478e-06 0 0 noncoding 0 0 0 0 -0.0639880900633468 0.583806762440272 0.00770192077677595 0.891553652010555 CACTTTCAGTTCAAGCAGATAATAGCTTAACTTGTGTACCATTTAAATAACTTTTCCTCTATGTCTGTGTTTACCCCAGAGGAAACAGGGATTTTGTACACCCAAAGATTTTTTTCCTTGTTTGTCTTAAATGAAAATAGCGATCTGACGTGCAACTGCTTGGGCCACTTGAAACAGATTTCTTTTTCCTTAAGTTTCTTTCTTGCAGAAACTTTGCCATGATATAGCAGCTCATCCATGGTGCTACATTAGTCATGCTAATTCTCTACATACTCATGGAACCCTTGGGGTGATGAGCTGGTACCCGCTTTTACATGCTTTTACATACTTTGCTTAACAGGGAGAAGATGGATGATACTAATCATTTTATGTCTTTTACAAATTGCACTAACTTAATCGGTTGTTTTAATGTCAAGCAGCTGTGAGATTCCTGCTGCGAGCAAAGCCTTTGGTCTCCTGGGTGGTAAAGCTTGTTTTTGTCCAAAAGAAGTTTTGGGGATGTTCAAAACTTGATAAAAATAAACCTGTGCTTTTCACTGCCG TCONS_00115230 . 5' 2648 TCONS_00115230 . 5' 2648 EMBV3_28981 AGGGAGAGACGGGTGCCGCTGGACTGAAGGGAACCAGTGAGCTCCGGGTAGACCTCATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06935 GGACCTCAACAAATCCAGCCGGGAGCAAATTTTGTGGCCCTGATAGGTGCACTCCTTGCC Variant GeneID:537812|DPAGT1:NM_001015664:178_cdna 342^462 1 EMBV3_31383 GeneID:537812 15 GENE DPAGT1 NULL dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) EMBV3_39508 TGCTGCATGGATGAGTGTCTTGAGTCAGTGTTCTCCCTGCTTATGCACCGTCTCTCCAAG Gene BVV0102_109696 + 0 NULL GK000014.2:1436385-1487365 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29616 GGCCTCTTCCATAGGCATTGTCATTGTCCTTGCCATCAATGTTTGTTACACCAGCATCAC Gene BVT0101_071175 - 1 EMBV3_31003 GK000007.2:10081565-10087797 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24414 CAGTCCTGGGCCTAAACACAAGAAGCAGAGGTCGCTCATCACTTGTCAAAGATCTACGCA Gene GeneID:511032|HEATR4:XM_002691057:475_cdna Constitutive 0 NULL GeneID:511032 10 GENE HEATR4 NULL HEAT repeat containing 4 EMBV3_24756 TGATGAAATCCGGCAACAGCAGCAGAAAATTATCCAAGAACAGGACGCAGGCCTCGATGC Gene GeneID:613567|STX8:NM_001078037:96_cdna Constitutive 1 NULL GeneID:613567 19 GENE STX8 NULL syntaxin 8 EMBV3_08688 GTACAATTTGTGGATGTCATCGAGCCTAGAGTACCTTCCCCTTTTTATATTTGTATTGAC Gene GeneID:506031|ZMYND8:XM_002692489:587_cdna Constitutive 2 NULL GeneID:506031 13 GENE ZMYND8 NULL zinc finger, MYND-type containing 8 EMBV3_28774 GCCGTGACCTATTCACCCTCCACTTCCCGTCTCAGAATCTATAAACGTGGTCACCTTCGA Gene GeneID:615626|PTMA:NM_001039953:151_cdna Constitutive 0 NULL GeneID:615626 2 GENE PTMA NULL prothymosin, alpha (gene sequence 28) EMBV3_04368 GTGAATGACCTTCCTAGAGCACTTGAACAGGACACTGATGAAATTCAAGTTAACTATCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34374 TCGCCGAGGAAGTGGGCGCCGCGCTGCGCGGCTTCTCAGACCTCGCTGTCATTTTGCTGC Variant GeneID:508714|C25H16ORF42:NM_001098911:102_cdna 167^580 1 EMBV3_41015 GeneID:508714 25 GENE C25H16ORF42 MGC159570 chromosome 16 open reading frame 42 ortholog EMBV3_43322 CCTACCAGAACGACAAGATCACGCAGCTTAAGATCGACAACAACCCGTTTGCCAAGGGCT Gene GeneID:535982|TBX2:XM_002695607:8_cdna UTR3_Alt 2 NULL GeneID:535982 19 GENE TBX2 NULL T-box 2 EMBV3_30887 CTGGAGTTCAGCCATGCCCAGTACAAGGAGCTGCGTGTCATCTCGGAATACCAGAAGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25421 GCAAAGAGTTGGACACGACCAAAGCAACTTAGCACACACAAGTATGCATGCCTCACGTCC Gene BVV0101_015135 + 0 NULL GK000001.2:143371061-143509230 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13656 AAGGCGGACAATGCCTGCTCTGGCTTACCACCTGCAGAAACATCTTGGCTTCCTCAGCAA Gene BVV0102_095509 + 0 NULL GK000014.2:63289518-63311959 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053655 TCONS_00053657 TCONS_00053654 TCONS_00053660 TCONS_00053658 TCONS_00053653 TCONS_00053656 TCONS_00053659 1 XLOC_031789 NonCoding TCONS_00053657 XLOC_031789 NonCoding NonCoding - 14:63303838-63309304 - TSS39530 1613 3 TCONS_00053657_1 80 0.530688158710477 2 0.705215004574565 0.00272923215567344 0.0037618697090115 0.0033162558869108 0.00196784901333184 0.00168318016711313 0.000912771992587819 0.000800507813049077 0.00110387525750912 0.00173498351993652 0.000273380455432584 3.01179348274986e-12 8.34083266309239e-14 3.07151390965397e-09 4.83844308640256e-116 1.59980371697334e-05 8.2350027512363e-14 0 0 0.00546701568727832 0.00654315940837399 0.00217330060732848 0 0 1.94502833438919e-19 0.00219722014289948 0.00114746866595963 0.0014109750115587 2.33943445397288e-15 1.45540059944483e-13 0 XR_229235.1 LOC101905472 PREDICTED: Bos taurus uncharacterized LOC101905472 (LOC101905472), 9e-118 428 85.87 0.216986980781153 0 noncoding 1 0 0 0 -1.49425005078162 0.00123090248665839 -0.0181112625272405 0.734481087387777 GACTAGTAGCCTCTTTCTCCCTGGAGGAGTGAGGATGGCTGCCAGCTAGCAGTCCTGTCTGCCATCTGCCATACACAGTGGTGGTCTAGGACCTTCCTTCAGACTGTAAGTTGCTCTGTCCAGTAAGTCACTGATGTCTCTGCTGCCCTCTCAGGATGAGGAAACCCCCGGGAGCTGAGATTAGGACACAGGGATGGGGGAAAAGAAGGCTGTGGGGGAGATTCCGAGGAGGCCATCCAGTAGCAGGCGGGGCCCTGTGGCAGCTGTGTACCACGAGAGGGTTGTTCCTGAGACCTTTCCAAGGCGGACAATGCCTGCTCTGGCTTACCACCTGCAGAAACATCTTGGCTTCCTCAGCAACCAGTTCACATTCCTTGGCTTGCCTGTGCCCTCGGTGATCACTGTTTATCAGATAATTCTAAACAAGTTCTGACACAGGCAACCTGGCAAACTCTCACCACCCAGTGTCATCTGCAAATACACATTTTCCAATGAAAAAAAGTCAACTAATGATCAAGTTTAAAAAGGAATTCTGTTTGAGCCAAACTGAGGAGTCTAACCCAGAAAGCAAATTCTTAGAAACCTCTGAGAACTGTCCCACCGGTTAGAAGTTGAAGGCATAGATACACATTTTTGAGACAAAGAATTGTACATCAAAATGACATGCTGATATTTTACATAAAATTCATGAAGGACATATAGTCTGGGTAAGCACAAATGAAGCGAGCAGCAAGTCACCACAACCCCCAGCAGAGCTGGAAAAGAACATTATTCTTTGGAGAAGTTACCTTGCTCGGGACTTCCCTGGCAGTCCAGTGGTTTCGACTTTGTGCTTCCGGTGCAAGGGGCACTGTTTCAATCATTGGATAAGGAACTAAGATTCTACATGCTGTGTGACACAGCCAACGGGTTTTTTTTTTTTTTTTTTTTTAAGTTACATTGTTAGTGTCAGAAGAAAGAAGAAGAAAAAATTGATCTTTAGGGTCGAGCAGACATTCCTGTCTTTGAGCAGGTCTGGTTAATGTGTAATAAAGGCCTGAACAGGATTTTGGGTTTAATGTTTTTTGTCCTGCCTTTAAATTTGATTCCATCAGAGGTATGAATGCCAGAGAGCTTCCAAGCTTGGAACTTGTCAAGGACAAATGGATATGTTAAGTGTCTTTTCCATAAATATTAGTAAAAACTGTGGTGACCCAAGGACAAAAGAGCAGATAAAACCAAGGAAGGTCTTGGAATGCAGGAACAGGAAAACCAGACCCTTATTGTCCTTCCCTCCCCCATGTTGTAAGGTCCTCCTGAGCAGTATAACTTTCTCCCCTCCTACGCCATAGGGAGAAGGTATTTGCCTTACTCTTCCCCCCCACCCAGTATTCGTGCCTCATCCAATCAGCAAATGACCCGCAAGACCCCTATCCCACTCCTTGTACCCTGGGTATAAAAGTGGACTAAGGACCCCTGTTCAACGTCAGTTCTCCCCTGAGCTGGCCTGCTATTCTAATAGCGTCTCCTGTTCTAAAAAAACTTTACTTCCCTCTCATCCTGTCTCTTGTCTGGAAATTCTTTTCCAACCCGTGCACGGACCATGACAGAAAGGAGTTAGCCATACACCCAGG TCONS_00053661 TCONS_00053662 s 3' 6788 TCONS_00053661 TCONS_00053662 s 3' 2656 EMBV3_04913 CTCCCCGACAACTACCTACGCCTGATACTGTGAACCCTCCTGCATTTCCGATCATGTATT Gene GeneID:508819|PIP5K1C:XM_002688924:100_cdna Constitutive 0 NULL GeneID:508819 7 GENE PIP5K1C NULL phosphatidylinositol-4-phosphate 5-kinase, type I, gamma EMBV3_43292 CACTTCCCAGGAGATGAAGTGTATTCTTCACTGGTAGCTAAGGCAGTACCAGGAAAATTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19221 TTGTTGGCACGAGAGCAGCTGGTCTGGGGCTGCTGCCCAAGCACCCCCGCCGGAGAAATA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24499 CAAGATCCGCTTCCTGATTCTGCCCGACATGCTGAAAAACGCGCCCATGTTGAAGAGCAT Gene GeneID:617823|SNRPD3:NM_001076479:118_cdna Constitutive 0 NULL GeneID:617823 17 GENE SNRPD3 MGC137063 small nuclear ribonucleoprotein D3 polypeptide 18kDa EMBV3_27794 CCCCCACTGCGAATTGTCTTAGCTAAGTGTGTGATCCTCATTTCTCTGTCCATCCCTAAA Gene BVV0101_057102 - 0 NULL GK000021.2:14484582-14561902 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17256 CCGCTACCCAGAACCCATGACACCAGACACTATGATTAAGCTGTATAAGGAGGAAGGCTT Gene GeneID:526888|EPM2A:NM_001099709:17_cdna UTR3_Alt 2 NULL GeneID:526888 9 GENE EPM2A NULL epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) EMBV3_10087 GTAGTGCCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAACCCTTA Gene GeneID:538680|BCL11A:NM_001076121:149_cdna Constitutive 1 NULL GeneID:538680 11 GENE BCL11A MGC139389 B-cell CLL/lymphoma 11A (zinc finger protein) EMBV3_07434 CATCTTCCACCTAGCCTACCTGGGCTCCCTGTTTGATGTTGATGTGGACGACACCACAGA Gene GeneID:540373|PORCN:NM_001101208:105_cdna Constitutive 0 NULL GeneID:540373 X GENE PORCN NULL porcupine homolog (Drosophila) EMBV3_43302 CCGCGTCGTCTACAGCCCGGGGGAACCGCTGCCATCCGCGTGACCTGCACGGGGTCCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09732 CCGTAGGAGGCTTCCTCAACCGGAGCACCTTTATCATTCTGCACACTTATTCTAATGTCC Gene GeneID:786577|TTC9C:NM_001083792:136_cdna UTR3_Alt 2 NULL GeneID:786577 29 GENE TTC9C MGC139386 tetratricopeptide repeat domain 9C EMBV3_20185 GATTTTACTGAAGAAGAGGAAGCCCAGGTACGCAAAGAGAACCAGTGGTGTGAGGAGAAG Gene GeneID:615427|SKP1:NM_001034781:17_cdna Constitutive 0 NULL GeneID:615427 7 GENE SKP1 MGC127638 SKP1A S-phase kinase-associated protein 1 EMBV3_03196 AAGGACAGGGAAACCTGGTGTGCTGCAGTCCATGGGATCACAAGGAGTCAGACATGACTG Gene BVV0102_407323 - 1 EMBV3_11188 GK000002.2:118879542-118886690 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00242958 TCONS_00170635 TCONS_00161344 TCONS_00110325 TCONS_00083942 TCONS_00180133 TCONS_00217318 TCONS_00228474 TCONS_00116802 TCONS_00048879 TCONS_00240533 TCONS_00157319 TCONS_00153769 TCONS_00022422 TCONS_00012088 TCONS_00055675 TCONS_00139450 TCONS_00249092 18 XLOC_149621 XLOC_103620 XLOC_098235 XLOC_066229 XLOC_051409 XLOC_109903 XLOC_131481 XLOC_138502 XLOC_070968 XLOC_029010 XLOC_147197 XLOC_095776 XLOC_093531 XLOC_013092 XLOC_007638 XLOC_033483 XLOC_084898 XLOC_152035 Coding TCONS_00055675 XLOC_033483 NonCoding NonCoding - 14:30385036-30385201 - TSS41352 165 0.606060606060606 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00347845198529479 0 0 0 0 0 0 0 0 0 0 NM_001076356.1 NIPSNAP1 Bos taurus nipsnap homolog 1 (C. elegans) (NIPSNAP1), mRNA. 3e-29 131 89.90 0.593939393939394 0 noncoding AGTAAGCTCCGGGAGTTGGTGATGGACAACTCACGAACAGGGAAGTTGGTGAAGGACAGGGAAGCCTGGTGTGCTGCAGTCCATGGGGTTGCAAAGAGTCAGACATGACTGAGTGAACTGAACTTAACTGAACTGAAGATTTCTGGTCCAAAGTATACAGTTGAT TCONS_00051612 . 5' 249443 TCONS_00051612 . 5' 249443 EMBV3_43274 GTGACACTTGGGAACCCCCACGACATGTGAAGCGGAAGCTTTCTAAATCAGATGACTGAA Gene GeneID:782847|ZHX1:NM_001110095:62_cdna UTR3_Alt 2 NULL GeneID:782847 14 GENE ZHX1 MGC159821 zinc fingers and homeoboxes 1 EMBV3_04523 GAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTTAAGGAGAAAGTGGAGCAGACACTG Gene GeneID:533809|DDX49:NM_001081729:53_cdna Constitutive 0 NULL GeneID:533809 7 GENE DDX49 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 EMBV3_22094 CTGAACCGAATTGCTGCCCAGGAAGTGCCCATTGAGATCAAGGTGGTAAACCCATCCACT Gene GeneID:504360|ACOT8:NM_001075157:835_cdna Constitutive 1 NULL GeneID:504360 13 GENE ACOT8 MGC140184 acyl-CoA thioesterase 8 EMBV3_31790 CCTTGTCGAACACGGCCTACAGGGGAAACCCTGTCTGGCGGTACCTTAGTAACTATTTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18695 AGAAGTTTGGGCTCAGCGTGTATCTGGTACAGGTCCTATTTGGCGTCATAGACATCCCGG Gene GeneID:526596|SLC22A20:XM_002699340:207_cdna Constitutive 0 NULL GeneID:526596 29 GENE SLC22A20 NULL solute carrier family 22, member 20 EMBV3_36796 CTATGCCTGCTCTGAGTGCGGCAAGCGCTTCAGCTGGAGCTCCAACCTTATGCAGCACCA Gene GeneID:613703|ZNF787:XM_002695518:343_cdna Constitutive 0 NULL GeneID:613703 18 GENE ZNF787 NULL zinc finger protein 787 EMBV3_30089 AGCGCACCGGCAAGTACGTCTACTTCACCATCGTCACCACCGACCGCAAGGAGATCGACT Gene GeneID:618810|PHLDA2:NM_001076521:31_cdna Constitutive 0 NULL GeneID:618810 29 GENE PHLDA2 MGC142673 pleckstrin homology-like domain, family A, member 2 EMBV3_10117 CAAAATCCACCCACCAGTGACCAGAGGCATTCCTTAAACTCCAGTTCTGCCAGTCATTCC Gene BVT0102_081960 + 0 NULL GK000002.2:126355404-126399311 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26020 ACATCTTTGACTTCAACCTGTCTTCAAACCCAAGTCCTGGACCCAGCCCTCCTGCCTGGA Gene GeneID:617552|CNKSR1:XM_002685767:567_cdna Constitutive 0 NULL GeneID:617552 2 GENE CNKSR1 NULL connector enhancer of kinase suppressor of Ras 1 EMBV3_27171 GCAGCTAGTGTATAAATAAGTCCTGGAGACCTAGTGCACAGAACAGTGATTACAGACAAC Gene BVV0102_020797 + 0 NULL GK000001.2:71661826-71697096 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31701 GTCACCTCTCAGGGACCATGCACAAAGGAACAGAGAGGACACAGAGCCAACACATTTCCA Gene BVT0102_429710 + 0 NULL GK000016.2:51633414-51683115 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01962 TGTGCCCTACAGTTTGCATTTTCATGGTGGCTGGCACTTGGCTGGGTGCACTTATCAATG Gene GeneID:787758|LOC787758:XM_002689084:11_cdna Constitutive 0 NULL GeneID:787758 7 GENE LOC787758 NULL similar to olfactory receptor MOR277-1 EMBV3_28565 CCGATTTTCAAGAGCGGTGATCAACACCCGACAGAGCGGAAATGCTTTTTGTTCTCCGAG Gene GeneID:100138828|LOC100138828:XM_002691113:37_cdna Constitutive 0 NULL GeneID:100138828 10 GENE LOC100138828 NULL similar to Uncharacterized protein C14orf102 homolog EMBV3_41808 GTGCCTTATGCTTCGGAGAATGCCATTTATGGAATGGGCTACACTAGCAGCCACTTGGAG Gene GeneID:782788|MGC148318:XM_002691025:376_cdna Constitutive 0 NULL GeneID:782788 10 GENE MGC148318 NULL hypothetical protein LOC782788 EMBV3_14766 CTTAGAGAGAAGCTGATGAAACACAATAGGCTCCAGATTAGAGGAGGCCTGTGCGCAGCG Gene BVT0102_350854 - 0 NULL GK000021.2:70733350-70827524 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120288 TCONS_00120289 TCONS_00121979 2 XLOC_073125 XLOC_073547 NonCoding TCONS_00120289 XLOC_073125 NonCoding NonCoding - 21:70783603-70784747 - TSS89874 1011 1 TCONS_00120289_1 33 0.387734915924827 2 0.117235345581802 8.89318606502986e-05 0.000779666056395402 2.99617419530018e-05 0.000174061580886785 0.000205103387052347 7.09354398814854e-06 5.93461003613881e-05 2.15234667823823e-12 0 0 0 0 0 0 5.65917015664208e-28 1.05871705085018e-11 0 6.83870344799835e-13 0.000162479885814529 6.38235941306684e-21 0.000669422776597429 4.19599284470243e-05 1.59515345057193e-19 2.36434709956931e-08 8.72397573927963e-12 4.37166829731885e-11 0.000119667017064599 0 0 0.000203030555238578 XR_239280.1 MOBP PREDICTED: Bos taurus myelin-associated oligodendrocyte basic protein (MOBP), transcript variant X2, misc_RNA. 4e-12 77.0 100.00 0.0405539070227498 0 noncoding 0 1 1 1 0.0728927127824122 0.519250012337606 0.0360953960508895 0.563349666224118 CTTGAAGTCCACCGAGGGGCTTTCCGGCCAGGCTCCCAGGCCAAGACCAAGGCCAGAGGCTGCAGCGGGCAGGACGAGGCAGCCAGGAGCCCAGCCCTACTAGTGAGCCACTAGCAAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAGTACCGGGGCTTTCAGCCTACGCTCACAGGGAGCTGCGCGGGGCATCGCTTCATACGTATACCTGGTTTTAGAGTCAGGGTTCATCCTGGCCTCGTGACGGGAGCTGGGCAACCTTGCTTGTGCTTCTTTCATCTTTCTCTTTTCTGAGACAATTTATCCAGAAAAGGAATCAACCGATCCTGTAAAGTTTGGTTGAGTCCCCTGTAGAGCCGGCTGGGCCTGGGTCTTCAGATTCATCGTCTGCAATGGCGGCGCTGCGCACAGGCCTCCTCTAATCTGGAGCCTATTGTGTTTCATCAGCTTCTCTCTAAGGACCGCGCAGCTGGATCCTGCGGATCTTGGCACGTGCTGTGAACACCATTTACTCCTAAGAGCGTCTGATTTCCTCTCCACCCGGCAGTCCCGAAGCGGCCAGAAGTGCGGTCGCGTGGGGAACTTGAGAAGTGCCGACTCACCTGCCCTCCGTTCCCCCATTTTACAGATGGAGAAACTGAGGCACGGAGCCTCCCCACGACTTGCAGAGGTCCTGCAGGGCAGTTGACCAACCCCTGGGGTGTGGGGGGCGGGGTGAGCCTTCTCCTCCGCCCCTTTGGGGAAGCCTGCGGGGTCCCTTCCCAGCACACGATTTGTAAATGTGTAAAATAAAAGGCTTCGTGCCGCAGAGCAAACCACTTACACTGAAATGCAGCTGCCGAAACAGCAGCAGGTGTAGCTGCTTATGCAGTGACGGATGAGGCTTCTCGCTGGTGTATTAATGGAGACCCAAAGACGGGTCTCATGACCACCAGTATTGAAACCCCAACCAGTGCTTCTGAGACCCTGGACCCCAGGTGGGGAGGGGGCTCTTCCTGCCGG TCONS_00120291 s 5' 30949 TCONS_00120291 s 5' 32092 EMBV3_14348 CCTGACTTGTGTTTGCAGATAGGCACAGAATCTAGGCAGTGTCCAGGCCAGTCAGAAGCA Gene BVT0102_072380 + 1 EMBV3_14917 GK000005.2:48844490-48917721 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191783 TCONS_00194918 TCONS_00191781 TCONS_00191782 TCONS_00194919 TCONS_00194920 TCONS_00191780 2 XLOC_117019 XLOC_117879 Coding TCONS_00191780 XLOC_117019 Coding Coding WIF1 5:48913746-49009466 j TSS143658 4880 1 TCONS_00191780_14 317 0.14733606557377 10 0.949121908920904 0.00231471265473871 0.00180779545716023 0.0023242366002985 0.00120648945878759 0.0013587069631893 0.000565555603134715 0.000877298306369691 0.00120243737589292 0.0010889775419592 2.54732595603936e-11 7.788715011694e-21 1.57253889060906e-39 1.93066818136311e-16 1.08884486501277e-90 0.0006421510537062 0 0 5.68748576164313e-13 0.00160854842062815 0.00240092647417078 0.000291108318404188 3.78794166048764e-13 0 6.85983586461761e-13 0.00154238588950413 0.00160685173699581 0.00179248924820831 2.91396990270719e-13 1.16850077013528e-17 2.90969628289183e-13 XM_005206638.1 WIF1 PREDICTED: Bos taurus WNT inhibitory factor 1 (WIF1), transcript 0.0 3097 100.00 0.351639344262295 NM_007191.4 WIF1 Homo sapiens WNT inhibitory factor 1 (WIF1), mRNA. 0.0 2239 88.84 0.352459016393443 TCONS_00191780_14 sp|Q9Y5W5|WIF1_HUMAN WIF1_HUMAN Wnt inhibitory factor 1; 0.0 632 94.64 0.996845425867508 0 coding 1 0 0 0 -0.545297750238681 0.0344727077317587 0.000771751391461933 0.988258631167515 AATGCGTACACGAGTGAACACATACATGAAGCTGCCCACAAATGTAATTGACGAGAGTGAGTTACACAAGGAAAGCAAGGATAGCGGACTAGAAAATACATGGTAGAGTTTTCAAACTAAATGAAGTTGACTTGTAATACCTCCTAGCACATTACTTCCAGAATTTTATCATGTGCCAATAAATATTGTTACATTACATTTTTATTTGAGCAGAGAAATCTTAAAATATGACTTTTTTTCTGAGTGAAAAAGCCTCCGTGCTCTTTAACATCAGAAGAAAATCCAGCCTGATTCAATCTTAGATGGACCTTCTTCCCCCAAAATACACCCTCTTACTCTTGAAAAATAGCTGACTAGCGTATAACATCTGCTCCTTCCTCCCCTTCAAAAACCAAAAGAAAGCAAATCCAGTATTTTTAAATAACACTTTTCTCTACCATAAAATGTAATTTCTCCAAGTGTCCACTGCTGGGGAGAAGTAAACAGAGAAAAAAATTCCTTACAGCTGTATATATCACCAGTATCACCAGTACCAGAATCAACTGTTGCACAAGAACCTCCCTCAGAAGAAGTTGAGTTAGGAGGGAATTTAGTGCCTCTTTTTCTCTACCAAAAAGTAAATTTTTTGAAGGATATTTACCAATTACTATTTGATTAGAACAGCCTGTAGAGGGCGTCCTTACATTAAGAGCTAGAGGGGTTAGAGCACTATTGAGGGAAAAAAATACTTTCAACTAAAACTGCACCTTTCTGGAGTAAAGAAAATGTCTACTGTGTTGTGAAATTATTATCTTTGGGGAACAATCGGCATTACAATGCTAAAGTGCTTTAAGTATTGCTGAATGTATATGAATGCATTACATAAATGAATATTCACTGAAATAAAAAAACAGTGAAATCTTTGAATAGATGTGAATTTTATTGTAAAGGTAGAACAGCTGTGAAGGTTTGGTTGCAAACAGACTTAATCATGATTTACTTGTCAGTGTGAGGTATAGTGGTTAAGAGAATAGGCTTTGAAATCAGAGTGACTGGGATTTGAACCCTGACTCTACCACTGACCAGGTAAGTAACCATAGTTAGCACTGGGTAACCACAGTCAGCTAACTTACTGGACCTTTATGAGCCTGGTTTCTCCATCAGTAACGTGGGAATAATAATATCACCTACCTATTTAAAAGTGTTGTGAGAAGTAAGCTCTTAAAGTACTTTTACAATTAAGAAGTTCAAATCCATTGGAGATTTCTTGTTGTTAGGGAAATTAAAATGGAGGAAGTCTTGTTTTGGCTTCAGAAGCAGGAGAGCAGGTTCTGACCTGCTTCTGACTGGCCTGGACACTGCCTAGATTCTGTGCCTATCTGCAAACACAAGTCAGGCAGCACTGTAGATTAAAAAAAAGGAGGTGGGTCTGGAATTCTTGAGCTCCTGAGGGTCTGGCCAGCATCCCCACACCCCAACCCCAGATCTAACAAAATCCTATGACTCACAAGATAAACAGCATTGTAAAAGTTTAAAAAAGAACCAGGGCTGCACTTTTGTGTGCAAATTGATGATATGTTTGTAGCCCAGGATTGTAAGTGGGAGCCCTGGAAACTGTAATTTGAAGTCTCACCCATGGGGTGGACGCATTGCCCAGGACCTTTTCCCAAATGGGACTCCAGATTGCTATTAATGAGGGACTTCCTAGGGCTGTTCAAGCCTGGATGTTGGTTGGCGCAATTTGGTGATATATGTGCTTTTACTTTTCTTTATTCTTTTCAGTTCAGTTGCTCAGCCATATCCAAATCTTTGCTACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCCAGCACCAACTCCTAGAGCTTGCTCAAACTCATGTCCATTGAGTCAGTGATACCATCCAACCATCTTATCCTCTGTCTTCCCCTTCTCCTGCCTTCAATTTTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGTTCTTCGCATCAGGTGGCCAAAGTACTGGAGTTTCAACTTCAGCTTCAGTCCTTTCGGTGAATATTCAGGACTGATTTCCTTTAGGGTTGACTAGTTTGATCTCCTTGTGGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTTAAAAGCATCAATTCTTCTGTGCTCAGCTTTCTTTATGGTCCAACTCTCACATCCATACATGACTGCTGGAAAAACCATAGCTTTCACTAGAAGGATCTTTGTCTTTTCTTTTAATGACTGTATAATTGAAATGAAGGCAATTAATCCTCGATTAAATATTGAAATTGTTTATTGTGTGACCAGTGGTTTCTTTTGTTAACAAATCCTTCAAACCAGAGCCAAGAGGCTACACGCCCAGCCGTCTACGCGGGGAACTGCTCCGGCTGGGAGACAACTTAAGGGCGGCAGGTTGGGTAGGTGCGGGAGGAGTTTCAGCTGCGAGAACCACGATCCAGGAGGTCCGGAGTAGCATGGCCCGGAAAAGCGCCTTCCCTGCCGGCGCGCTCTGGCTCTGGAGCATCCTCCCGTGCCTGCTGGTGTTGCGAGCGGAGGTCGGGCAGCAGCCGGAGGAAAGCCTGTACCTGTGGATCGACGCTCACCAGGCGAGAGTGCTCATAGGTAAGATTTCGCGGGAGCTTCTACTTCTTCCCAAATGCCTGGGTCTTCACGCCCTGCAGCTCTTCTATTAAAGGAGAGATACATGCATTTAGAATGTTTTTTAAACTTAATTTCCAAGGAAGATTGTCCCCTTTTTAGTTAGTTGCGTGTTTGCTAAGCCCCTTCAGTCGTGTCGGACTCTTTGCGATCCTATGGACTATCGCTTTTCCATCTAAAAGCGTTTAAGCTTTTCTCTCCGTAAATCTAAGCTGTTCTAATGTTCTGATCATGCTGTTGTTGGTTTCTACAATCCAGCGTTTTTCAGTGGACCGAGCATGTGTTGGCACCAGTTTACTCCACAGTTCACTCCGTTTCACTGAAAGCATGTCTTTGCCATCATTCTTATCATCCACAGGAAGATTAATTGGTACTTGAAGGCAGGTGCTTTGTGAAAAGAAATGACCCATTACTAATTCTTCGGTGTTCTTTTGGCACGCAAGTTCTGATTTGGATTCTTCTAAGTTCAGCTAGTTTGATAGCTTTATTTCTTTGTGTGTGTTTTTTAAACCAGGACTTGAAGAAGATATCTTGATTGTTTCAGAGGGGAAAATGGCCCCCTTTACACATGATTTCAGAAGAGCACAGCAGAGAATGCCAGCTATTCCTGTCAATATCCATTCTATGAATTTCACCTGGCAAGCTGCAGGGCAGGCAGAATACTTCTATGAATTCCTGTCCTTGCGCTCCTTGGATAAAGGCATCATGGCAGACCCAACTGTCAATGTCCCTCTTCTGGGAACAGTGCCTCACAAGGCATCAGTTGTTCAGGTTGGTTTCCCATGTCTCGGCAAACAAGATGGAGTGGCAGCATTTGAAGTGAATGTGATTGTCATGAATTCTGAAGGCAATACCATCCTGCAGACACCTCAAAATGCCATCTTCTTTAAAACATGTCAACAAGCTGAGTGCCCAGGAGGATGCAGAAATGGAGGCTTTTGTAATGAAAGACGGGTCTGCGAATGTCCTGATGGATTCTACGGCCCTCACTGTGAAAAAGTCCTTTGCTCACCACGATGCATGAATGGCGGGCTATGTGTTACTCCCGGTTTCTGCATCTGTCCACCTGGATTCTATGGAGTCAATTGCGATAAAGCAAATTGCTCAGCCACCTGCTTTAACGGAGGGACCTGTTTCTACCCTGGAAAGTGTATTTGCCCTCCAGGACTAGAGGGAGAGCAGTGTGAAACAAGCAAATGCCCACAGCCCTGTCGAAATGGAGGTAAATGCATTGGTAAAAACAAATGCAAGTGCTCCAAAGGTTACCAAGGAGACCTCTGTTCAAAGCCTGTCTGCAAACCTGGCTGCGGCACACATGGAACCTGCCACGAACCCAACAAATGCCAGTGTCGGGAAGGCTGGCATGGGAGACACTGCAATAAAAGGTATGGAGCCAGCCTCCTGCATACCCTGAGGCCAGCAGGCGCCCAGCTCAGGCAGCACACGCCTTCAGTTAAAAAGGCCGAGGAGCGGCAGGACCCACCTGAATCCAATTACATCTGGTGAACTCCGACATCTGAAACATTTTAAGTTACACCAAGTTCATAGCCTTTGTTAACCTTTCATGTGTTGAATGTTCAAGTAATGTTTATTACAGTTAAGAATACTGGCCTGAATTTTATTAGCTTCATTATAAATCACTGAGCTGATATTTACTCTTCCTTTTAAGTTTTCTAAGTACAGCTGTAGCATGATGGTATAGATTTTCTTGTTTCGGTGCTTTGGGACCAACTTTATGTTATGTCAGTTGTTCAGGTTAAATTTTTGTCTTTTCAGTGTGTACTTGGCAGATAATTTCCAAAAGTACAATGCATTCACGGTATTGAGAGGCTGGGCAACATTAGAGAAGATAAATGGAATAAAAATGCATAAATCACAAGGGTTTGGATGAAGCAGTTAAAAGTGCTGAAGTCTTCGCATTTCAATTTATTTTGTCATGTATTTAGACACTTGTTACATTTTTTGAATTCCCCTTAAACTCATAATACATTTTACCTTACCATGACCTTACCATGATTCCAGAGAATTCAGTATTAAAAAAGAGCGAGAAAGAAATAACACTGTGGTAGTGACATTTAATGATATAATATATTGTAAACACAATAAAATAGGGAATATATGTATGAACTGTTGGCATTGGCTTGAAGCAATATAATATATTGTAAACAAAACACAGCTCTTACATAAACATTTTATACTGTTTGTATAAAATAAAGATGCTGCTTTAGTTTTC EMBV3_03483 ACTGAGTGACAGATGAGTTGTCTTCCTGCTGAACTGTGCTGAGTGCGGAGACTCCAGTTT Gene BVT0102_041659 + 0 NULL GK000005.2:69206622-69816582 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195463 1 XLOC_118052 NonCoding TCONS_00195463 XLOC_118052 NonCoding NonCoding - 5:69565036-69571664 - TSS145655 515 3 0.922740304813641 0 0 0 0.000306366963610851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000107626760249149 0.000820830301718038 0 0 0 0 0 noncoding 0 0 0 0 0.0962396761578981 0.404561887114305 -0.00115855282472124 0.980600290458067 GTCCATCCCATAAATCCAGTGTGGAGTGGAGCTGCTAACCCGACTACAAAAGGCCAGCCTCTGGGCACACTCAGGACTTGCAGATGACTACATGATGTTCTCATCCAAATTCTGGGGCTGTCACCCAACAGAAAGGTGACCCCGCCTGTCTTAACCTCAGCGCAGAGCTCCTGGAGGCAGCTTCTCTGTTGGACAAGGCCAGGCCCACCTACAAGACCCAGACAGGGACAAGGTTGGCTGCAGCCTGCAGTGACCATGGATACCTGTAATGAGAGGGGGCCTCTGGTGACTGAGTGACAGATGAGTTGTCTTCCTGCTGAACTGTGCTGAGTGCGGAGACTCCAGTTTCAAGGAGGCAGACTGATAACCGAATGTGAGCACAAAATAATTGATTGTTTTGTTAATTGTGCCACTGTGATTTGGAGGTTATTTGTTACTACAGTATAAATTGACTCTTGCTGACCACTATTGTCTCACCTGGATTATTTGAGGAAGATGAATAAAAAGTATCCCTA TCONS_00195464 s 3' 251282 TCONS_00195464 s 3' 244919 EMBV3_00500 TGCAAAACTGCTGTCTTCAGAGTGAGTACAAATCAGGCAAGAGCTGGCCAAGGGGTGCAC Gene GeneID:100296618|LOC100296618:XM_002695624:23_cdna Constitutive 0 NULL GeneID:100296618 19 GENE LOC100296618 NULL similar to extracellular proteinase inhibitor EMBV3_37759 CGCTGGCACAGAGGGTCAGGAACCGTGTCAACTTCAGGGGCTCTCTAAATACATACAGAT Gene GeneID:613479|GTF2A2:NM_001037619:121_cdna Constitutive 2 NULL GeneID:613479 10 GENE GTF2A2 MGC133516 general transcription factor IIA, 2, 12kDa EMBV3_14306 CCTCGGAGACAATACAGGCCCTGCAAATACCTTCATCGCTCAGTAAATGCTGTAGATGGG Gene GeneID:100294977|LOC100294977:XM_002696294:33_cdna Constitutive 0 NULL GeneID:100294977 20 GENE LOC100294977 NULL hypothetical protein LOC100294977 EMBV3_24346 GTATGTGGAGATTGTGGAAGAGCCTTCATTGAGAAATCACACCTCACTGTGCATCAGAGG Gene GeneID:100336683|LOC100336683:XM_002700105:242_cdna Constitutive 0 NULL GeneID:100336683 X GENE LOC100336683 NULL zinc finger protein 300-like EMBV3_27118 GTATCATCAAATACCACTCACAGCCACATCAGCCCAACCTGAGCCCACCTTTCTCTCTTG Gene BVT0102_117521 + 0 NULL GK000016.2:81042699-81130065 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09315 GTTGTGTCTAAGGAAAGTTCTAGAGGTTAGGTATTTAATTGGAAATTGAGAGGAAACTTG Gene GeneID:537894|SMCHD1:XM_002697736:223_cdna Constitutive 0 NULL GeneID:537894 24 GENE SMCHD1 NULL structural maintenance of chromosomes flexible hinge domain containing 1 EMBV3_34712 TAAGTACTCATGCGGCCTTGGAAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGGTCC Gene GeneID:614525|BEND4:XM_002688217:109_cdna Constitutive 0 NULL GeneID:614525 6 GENE BEND4 CCDC4 BEN domain containing 4 EMBV3_32336 GGTTCATGGGGTTGCAAAGAGTGGGACATGACTAAGCGACTGAACTGTACCATTACATCG Gene BVT0102_215802 + 0 NULL GK000010.2:71162897-71398814 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022013 1 XLOC_012684 Coding TCONS_00022013 XLOC_012684 Coding Coding - 10:71181428-71182244 - TSS15903 816 1 TCONS_00022013_1 139 0.580882352941177 1 0 0 0 3.96923693517375e-05 6.61482467728864e-05 0.000378154415370541 8.76727971519163e-06 0 0 0 0 0 0 0 0 0 0 0 0 0.000105454863483575 0.00010685795013684 0 0 0 0.00014381432739923 0.000101889293774353 1.72683010004464e-05 1.89765546746069e-05 0 0 0 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 0.0 655 90.74 0.579656862745098 0 coding 0 0 0 0 -1.05727531145957 0.0344090733791855 0.0409348524141073 0.521686303255311 GACATTACTTTGCCAACAAAGGTCTTTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGAAGTGAGAGTTGGACAGTGAAGAAAGCTGAGCATGGAAGAATTGACGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATTGTAAAGGAGATCGGTCCTGGGTGTTCATTGGAAGGACTGATGTTGAAGCTGAAACTCCAGTACTTTGGCCACCTGATACAGAAAGCTGACTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCTGGAGGAGAAGGAGACGACAGAGGATGAGATGGTTGGATGGCATCATCAACTCGACAGACATGGGTTTGGGTGGACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCGGTTCATGGGGTTGCAAAGAGTGGGACATGACTAAGCGACTGAACTGTACCATTACATCGTCTTCTGTGTTCATTAGTCTCAAGTTGACAAAGTGTATTTACATTAGATTTGCAAATTTGAGATATATTTTTTGTTGGTTATTTAGAAAAATGAATTTATGTTAGGTTTGCAGCTTTGTCTAGCTGACACAGTGCATTTATGTTAGATTTGCAGTTTGGGGACATATTTATTGCTGTTTTTAGAAAATATTTAAATAATATGATGTCTAAGCTGCTTCTTGCCTTCGAAGCATCCAGTGGCTATTTCACAGATGTGAGTCTGAACTGATTATTTAGTTTTCAATCACATGATTTGGTTTTTCAAATAAAAATAATTAATATATGCCCT TCONS_00014585 . 3' 18527 TCONS_00014585 . 3' 19342 EMBV3_43518 ACCTATTAAAAAAAAATACTTCATAGAGCCTGCCTTATCCAACATGAAATTCCCTTCTTT Gene GeneID:537652|TRPS1:XM_002692745:65_cdna Constitutive 2 NULL GeneID:537652 14 GENE TRPS1 NULL trichorhinophalangeal syndrome I EMBV3_34523 TCTGATTGCCTCCTTGACGCTCCGTGGCTTGATCTTCCAGAGTGAGGAGGGAGAAAACAT Gene GeneID:327666|SIRPA:NM_175788:785_cdna Constitutive 0 NULL GeneID:327666 13 GENE SIRPA MGC148619 MYD-1 PTPNS1 signal-regulatory protein alpha EMBV3_16007 CAACACCAACCATGGGCATATTCTGGTGGAGCCGCCCGGGAGCGCATGTTTACTGGTGAG Variant GeneID:280808|GPI:NM_001040471:493_cdna 243^315 1 EMBV3_01096 GeneID:280808 18 GENE GPI MGC127793 glucose phosphate isomerase EMBV3_43015 GTCCAACACGGCCATCAAGGGGTCGGACAGTGTATACCTTGTGGTCTTATCCCGATCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41688 GGGACCAGCAGCTGTCGCCGCCGCTCTCAGGGTGAAGAAACAATAGAAGTTTTTGTCCCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38539 CCTGGCTCTCGGTTCCTGGACCATTGGCTTTGGCATCTCCTTGGCTAAGACATACTTCAT Gene GeneID:509170|LOC509170:XM_002687022:82_cdna Constitutive 0 NULL GeneID:509170 4 GENE LOC509170 NULL similar to olfactory receptor MOR103-1 EMBV3_00098 AATCACCCAGCCCCCGCTGCTGTCCATCAGAAAGATGCAGCTCTACGTAGAAGAGCGGGC Variant GeneID:506605|MAD2L2:NM_001045946:37_cdna 459^716 6 EMBV3_23984 GeneID:506605 16 GENE MAD2L2 MGC137331 MAD2 mitotic arrest deficient-like 2 (yeast) EMBV3_41333 ATATGCTGTTCATAAGCGTAAATGTAGACATTTTGACCCTCAGCGTGAGTATACCAGCAG Gene GeneID:781912|TAF2:XM_002692836:201_cdna Constitutive 0 NULL GeneID:781912 14 GENE TAF2 MGC166014 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa EMBV3_37090 GAGTAGTTTGCAGGTGTGTGGTAGTGGTTTAATTTGCAGCATTAGCTCTGTGGTGTCAGG Gene GeneID:515193|SLTM:XR_082699:306_cdna Constitutive 0 NULL GeneID:515193 10 GENE SLTM NULL SAFB-like, transcription modulator EMBV3_22572 TGCCCAAAAGCGACAAGAACCGGGCAGACCTTCTCGACACCATCAATACCTGCATCAAGA Gene GeneID:100337124|LOC100337124:XM_002690440:186_cdna Constitutive 0 NULL GeneID:100337124 10 GENE LOC100337124 NULL phosphodiesterase 8B-like EMBV3_38213 GGCGAAAGTCCCTCTGGTTGTCTCCCTACCACCCTATACACACTGACAGAGGCAGCAATA Gene GeneID:534510|TRIM3:NM_001101157:43_cdna Constitutive 1 NULL GeneID:534510 15 GENE TRIM3 NULL tripartite motif-containing 3 EMBV3_16992 AGCCATTGGGTCTCAGAAGAAGTTTAGTCGCCCACTGCTGCCTGCCACCACGACAAAATT Gene GeneID:531459|PSD3:XM_002698744:8_cdna Constitutive 0 NULL GeneID:531459 27 GENE PSD3 NULL pleckstrin and Sec7 domain containing 3 EMBV3_37847 GTGGCTATATTTACATTCCCACCAACAGTGCAGGAGCAATTCCCTTTTCTCCACACCTTC Gene BVV0102_409789 + 0 NULL GK000009.2:32834378-32926830 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28398 GTACGTGCATGGTGGGGCATGAATCTTTAAAACATCTGGATCGTAGAGTCAGAACCTGCA Gene GeneID:281584|ABCA4:NM_174221:111_cdna Constitutive 2 NULL GeneID:281584 3 GENE ABCA4 NULL ATP-binding cassette, sub-family A (ABC1), member 4 EMBV3_12070 GGTCAGCCTTGGAGAATGACTTTGATCCTGCTATACTCACAGAGAAGGAAATGTGCCTCC Gene GeneID:614663|CALCA:NM_001076340:219_cdna Constitutive 0 NULL GeneID:614663 15 GENE CALCA CALC3 MGC152154 calcitonin-related polypeptide alpha EMBV3_05788 TTCAGTTTTGGCTACGGACCTCCACCTCCCCCACCAGATCAGTTTGCCCCTCCAGGGGTT Gene GeneID:614783|DAZAP1:XM_002689174:223_cdna UTR3_Alt 3 NULL GeneID:614783 7 GENE DAZAP1 NULL DAZ associated protein 1 EMBV3_07226 TTCCCATCTGCGTAGCCCTAACTCTGAAAGAGGAACTCCGTCAACTCGCTCAGGGAGGCT Gene BVT0102_097694 + 0 NULL GK000013.2:74433457-74440208 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38354 AAAGGCAGGACGAGCACGGCTACATTTCCCGTTGCTTCACTCGCAAATACACGCTGCCCC Gene GeneID:516099|HSPB1:NM_001025569:188_cdna Constitutive 1 NULL GeneID:516099 25 GENE HSPB1 NULL heat shock 27kDa protein 1 EMBV3_21499 CCCGGAAGTGGGTTTTCTGGGTAATGGGTTAGTTCTGTTTTTAGATTTTGAGGACCCTCC Gene BVT0102_115635 + 0 NULL GK000030.2:119374579-119388579 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245591 TCONS_00245592 TCONS_00245593 1 XLOC_150768 NonCoding TCONS_00245591 XLOC_150768 NonCoding NonCoding LOC100337353 X:119088702-119387566 x TSS184326 969 2 TCONS_00245591_1 100 0.365325077399381 2 0.996764403756905 0.000784772543700445 0.000486616244679034 0.000908608481326157 0.000590320294277127 0.00131281618004265 0.000201431068520699 0.0010646682882573 0.00239682112278541 0.000220951663443699 3.5096431215725e-07 0 0 1.13280837063401e-06 6.01405655519843e-14 1.10122961638327e-05 0 0 0 0.000668017177978493 0.000832596336302171 0.000249615074472301 9.77306616129547e-06 6.1975874055158e-11 0 0.00185004375591218 0.000725182414417879 0.00137715913332396 0 0 0 NM_001075135.1 UBE2D3 Bos taurus ubiquitin-conjugating enzyme E2D 3 (UBE2D3), mRNA. 9e-122 441 84.18 0.421052631578947 NM_181888.3 UBE2D3 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), 8e-135 484 80.14 0.56140350877193 0 noncoding 0 0 0 0 0.0997636446494594 0.4317403529634 0.00242106066717072 0.960354451535989 TGCATTTGCAACAGAATTTATCATCCAGACATGAACACTAATGGCAACCACAGTGATCTTAGAGTAGTGAACTGAGTGTTGCCATTAGTGTTCATGTCTGGATGATAAATTCTGTTGCAAATGCACCCTTAGGTAGTGTGAAGGGGTAGTTTTTAGGGAAATGAATTGTCAGAGAGATTACACTGCCTCAATATGGGCTGCCGTTCTTTTTCATAGTTGTGGTTTGCCAATGAAATGTATCATCCCCAACTGGACCTGTAGAATATTGTGCTGGAGGGTCCCTGCCCACCTCACTAAGTTCCTTATTAATCCATTCCAGCGCCACAGTCTGTGCTTTTTGTCTGACTCCTCACTGTCTCAGTGTGGGCTCAAAGGTCCAGCCAAAACTCCTGATTATCTGGTGGCTGGGAAGGACTATCTCTTCATCTCACACTGGCTCTGCCAGACACAGGTGCCTTCTTAATAAACAGGGAGGTTGGACCTGGGTGGGGTCACTGGCAGAGAGTAGATGAGGCTGGAGGGGAAGGGGAAACAAGCAGTGGAAACCCTTAGACTCAGACAAGCATCGAGTACCTGATGGAGACCATCCAAATTAGTGGGTTTTTTTTTTTTTTTTTCCTTTCAGATATACACCCGGAAGTGGGTTTTCTGGGTAATGGGTTAGTTCTGTTTTTAGATTTTGAGGACCCTCCTTACTGTTATCCATGGTGGCTGCACCAATTGACATTCCCACCAACACTGTACAGATCGTGTCCACATGCTCACCAACATTTGTTACTCCTGTTCTTTTTGGATGATAGCCCTTCTGATAGGTATAAGATAATACCTCATTGTGGTTTAAATTTGCATTCATATGATGATTAACGATGTTGAACATCTTTTCATGTGCCTCTTAGCCAGCTGTATGTCTTCTTTAGAAAAATGTGTACTTAAGTCTTCTGCCCATCTTTTTCTTGATTTTTTTAAAAC TCONS_00245594 s 5' 1014 TCONS_00248139 r 3' 17455 EMBV3_11558 AGGCAGACATTTGTCTCACCTTTTTCATTTTTGTTGTGTCTTAGGAACTGATTGTGTGTC Gene GeneID:781454|ERLEC1:XM_002691321:462_cdna Constitutive 0 NULL GeneID:781454 11 GENE ERLEC1 NULL endoplasmic reticulum lectin 1 EMBV3_40926 ATCTAAGGGGCACCATCAAAGAGGCACAGGGAAGGTTTATCCCAGCATGCACAGGAGAGT Gene GeneID:523131|TNFAIP8L3:XM_002690926:235_cdna Constitutive 0 NULL GeneID:523131 10 GENE TNFAIP8L3 NULL tumor necrosis factor, alpha-induced protein 8-like 3 EMBV3_37203 AAACAGGTGCCGACGTGCCCCATGCCGGGTTTTTGCTTCGCTTTCTACATGGATTCGAAA Gene GeneID:100298176|LOC100298176:XM_002695480:207_cdna Constitutive 0 NULL GeneID:100298176 18 GENE LOC100298176 NULL hypothetical protein LOC100298176 EMBV3_27494 CTGTCACTACAGAAAATGAGCACAAGGCCATTCTGGGTCACGGGAGAAGCCATCCTGAAC Gene GeneID:510356|TNK1:XM_002695801:372_cdna Constitutive 1 NULL GeneID:510356 19 GENE TNK1 NULL tyrosine kinase, non-receptor, 1 EMBV3_32054 TAGGCTTCCTTCTGGCAGATGCTGGTTATGATGTGTGGATGGGGAACAGCAGAGGGACTA Gene GeneID:515342|LIPJ:XM_002698372:164_cdna Constitutive 0 NULL GeneID:515342 26 GENE LIPJ NULL lipase, family member J EMBV3_15059 GAAATCTGCCAGTGTCCAGGGCTTCTTCTTGAACCATTACCTTCCTGAGTTTCGAGGTGC Gene GeneID:532505|ZADH2:NM_001075964:20_cdna Constitutive 0 NULL GeneID:532505 24 GENE ZADH2 NULL zinc binding alcohol dehydrogenase domain containing 2 EMBV3_20136 CACAAGATATCTGGTCCAATGGTGAGAGCACTACCGATTTTAACAAGTCTTTTGATGGAA Gene BVV0102_334967 - 1 EMBV3_09872 GK000002.2:37235997-37237433 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105046 TCONS_00105049 TCONS_00102246 TCONS_00105045 TCONS_00102247 TCONS_00102240 TCONS_00105044 TCONS_00102261 TCONS_00105048 TCONS_00102252 TCONS_00105047 2 XLOC_062497 XLOC_061832 Coding TCONS_00102246 XLOC_061832 Coding Coding WDSUB1 2:37167344-37237340 j TSS76191 3151 1 TCONS_00102246_3 451 0.0434782608695652 12 0.955153939567112 0.000231814080712548 0.000830923750215797 0.000403224545708698 0.00029499024913409 5.96835095160527e-05 1.6633530905307e-05 4.47373955266586e-05 2.84453302977319e-05 0.000214578658050521 4.61833179550756e-05 1.3305279326628e-06 0 1.25901516095144e-05 2.9666115089861e-05 3.61498303027327e-96 9.63216116087082e-44 1.195185413833e-191 0 0.000114096302335979 0.000108405102011553 3.08434791974602e-05 7.3934846704878e-139 1.5792256646033e-05 1.17027874966525e-65 0.000487060565431479 7.84521138193068e-05 0.000396049131680326 2.35919306212128e-28 1.50333416635215e-05 2.5924918420057e-77 XM_002685348.2 WDSUB1 PREDICTED: Bos taurus WD repeat, sterile alpha motif and U-box domain containing 1 (WDSUB1), transcript variant X1, mRNA. 0.0 2502 100.00 0.439860361789908 NM_001128212.1 WDSUB1 Homo sapiens WD repeat, sterile alpha motif and U-box domain containing 1 (WDSUB1), transcript variant 2, mRNA. 0.0 1732 89.49 0.411298000634719 TCONS_00102246_3 sp|Q8N9V3|WSDU1_HUMAN WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1; 0.0 783 83.63 0.997782705099778 5 coding 0 0 0 0 -0.043801953541578 0.821698241301216 0.0139000032018992 0.785165793014857 GGCGTTTTGGGTCTTCGACGTGAAAGGACCAGTGCCCAAGGGCCAGTTTAGCAGCAGCGGTGGCAGGATGAAGTAACGTTTATCTAAAAACTGCAGGATATTTTCCAGTAAAGAACATGGTGGAACTAATTCACACATTAGCAGATCATAATGATGATGTCAACTGCTGTGCCTTCTCCTCTTCCCTCTTGGCTACTTGTGCCTTGGACAAAACAATTCGCCTATATTTCCTGAGTGACTTTACCGAAGTACCATACTCTCCATTGAAGTTTCACACCTATGCTGTCCACTGCTGCTGTTTCTCCCCTTCAGGACATATTTTGGCTTCATGTTCAACAGATGGTACCACTGTCCTATGGGATACTCAAAACGGGCAGATTTTGGCAGTGATGGAACAGCCCAGTGGTAGCCCTGTGAGAGTTTGCCGATTTTCCCCAGACTCCACTTGTTTGGTGTCAGGGGCATCTGATGGAACTGTTGTTTTGTGGAATGCACAGTCATACAAGTTACATAGATGTGCTAGTGTTAAGGATGGCTCCTTAGTGGCCTGTGCGTTTTTTCCTCCTGGAAACCTCTTTGTCACTGGCTCCTCATGTGGTGATTTAACAGTGTGGGATGATAAAATGAGGTGTCTGCACAGTGAAAAAGCACATGATCTTGGAATTACCTGCTGTGACTTTTCTTCACAACCAGTTCCTGGTGGAGAACGAGGTCTTCAGTTCTTTCAGTTGGCATCATGTGGTCAAGATTGCCAGATCAAAATTTGGGTTATTTCTTTTATCCATATCTTAGGTTTTGAATTAAAATATAAAAGTACGCTGACCGGACACTGTGCTCCTGTTCTGGCTTGTGCTTTTTCTCATGATGGGCAGATGTTAGTTTCAGGATCAGTGGATAAGTCAGTTATAGTGTATGATACTAATACTGAGAATATACTTCACACCCTGACTCAGCACACCAGGTATGTCACAACTTGTGCCTTTGCACCCAATATCCTTTTACTTGCTACTGGTTCAATGGACAAAACAGTGAACATCTGGCAATTTGACACGGAAACACTTTGCCAAGCAAAGATCCCAGATCAACCAAAGCAATTTACTGAAAATTGGTCAGAGGATGATGTCTCAAACTGGCTTTGTGCCGAAGGTTTAGAAGACCTCGTTGATATTTTCAAAATGAATAACATTGATGGAAGAGAACTATTGAATCTTACAAAAGAAAGTCTAGCTGATGATTTGAAAATAGAATCTCTAGGGCTGCGTAGTAAAGTTCTAAGGAAAATTGAAGAACTGAGGACAAAGGTGAAAACCCTTTCTTCTGAAATTCCTGATGAATTTATATGTCCAATAACTAGGGAGCTTATGAAAGATCCTATCATCGCATCAGAATATGAACACTTCAAGAAAAATATCAATCGCTGTCAAACTCGTCCAAACAACAGAAGAGAGAAAACTTACAAACTCATTTTATGAGCCAGCATTACCCTGATAACAAAATCAGATGAGAGCACACAGGAAAAGGAAATTTCAGATGGCTACTCATATGAAAAGGAAGCAATGGAAAATTGGATCAGCAGAAAGAAACGTACCAGTCCCATGACAAATCTTGTTCTTTCTTCAGTGATACTTACACCAAATAGGACTCTGAAAATGGCCATCGATCGATGGCTAAGTGAGACACATCAAAAATAAAACTCTATATTGTGTTATTTATATTTTCTGTGATCTCACTTGAGTGATTTAAAGGTAAACTTTGTAAACTGAGTTACCTACCTTTTCATATAATAGTGAATAAAATCTTAACCTATAGAGAAAGTTTTACTTTGACTTCAAATTGCAATGCTCAAGTTTATTCTGGTTATAGATCATATTCCATTATAACCAAAGATCAGAATAATCTAGACTAGAACATAATCCTAGTTAATAACATTTCATTTGATAACTCTCTGGAATCCTTCTAAAGAGTTTTTTAGCAAAATAATTATAGATTTGTTTACGAATACATTGAGAAAGTCACTTTGATATATTTACTAGCAGTTTTTTAGCTTCTAAGTTTGCAAGGTAGTAATGATTTTTTTCCCCATTGTCCAAACCTAGGTACAAGTTAGATAGCATAAATTATCACAGATACATTAAGTTGACTTTGCTGAAACATATAAAGTGGCAAACTAGCCTCCTTTTAGAATATAGAGTTCTTAAAGTTCTCACATCATAGTTTAAGCTAAGGTGACTATACATTTGTACACAGTAGGCTGATAGCTAATACAAGCACCCTGACCAACATTTGCTCAGAAGACTTCAGGTCCCGTAAGTGGAGGTTACACTGCCTCTCCCTCCCTCTCGCAAGTTGTTCACCAGAATGGAAGCCATTAGTGCAAAGCTTGCTAAAACTAAATAAACTCTAAGGGCACGGAGGGACCAGGACTCTGTACTTACCCCCAAACCCTCACTGTAATTGTTCTGAAATTTGAAAACACAAATAAAAAGCAATATAAGGATATATTCCATCAAAAGACTTGTTAAAATCGGTAGTGCTCTCACCATTGGACCAGATATCTTGTGTTTTGATAAAATAATACTTATTTTTCAAAAGGGCTAGCTGGTTTTCACATAAAAATTACTAAAAATTATTGAAGTCACTGACAGAAAACACAATAAAAGATGTTATTTTTTAAATGTTTTAAAGAAGGTGATTTTCTTTTCCTACATTTCACTAGGATAGTTTCTAGTTAAGTGACTGAAAACTAAGATGCCAGTTTACCAAAGTGAAGTGTTCTGTTTTTCTCTACAAACAAACCAAAGCTAACTACTCCTCCCCACAAAGCACAGGCAAACAAAAAATCAAATCTAAAACCATCCATAGGAAAGGATACCGCCTGGCCCTCCACACCGCACTAGGGGCCATTGTCCCTGCAGGACTCGCTCCTTGGGCCTCAGCTCCCACCAACAGCTTCCCAAGGAGACAGCACTTCCTGGAACTACTGGACCAAATACATTTACTCAGAATCCATCACAGTAAATTCTAATAGTCATACTGGCAGCATCACAGGAAAAGTCATCCAATAAGCATTTATCTGCTACTAGAGTTTCCCCTCCTACCCAGTTTTGTTTTTTGACCTTGAGTTTAAATATATGACTTTAAATAAGGACTG EMBV3_01851 GTGCTCCCACATGTCCAGGCCTTCGTGCAAATTTGCTTGCCTTCTCCTGCTTCCTCACAT Gene BVT0102_195385 + 1 EMBV3_01722 GK000013.2:63692402-63704816 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39274 TTTCCTCTCAGGAGCCCGACCTCTTCTTACCAACCCTCCTGCTTCCTGGGCTTCAACACC Gene BVV0101_077731 - 1 EMBV3_04536 GK000019.2:36225628-36250352 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02792 TGACAGGAACGCTTATTCTCCGAGATGATTAATAAAAGTAGTAAACCTCCAGCCGGACTG Gene BVV0102_361994 + 0 NULL GK000020.2:71247879-71263286 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00848 AGCACCCTTAACCTGCACTCTCTTGACCTGTGGTTTCTATCCCAGAGGCCCGGTTGGCCA Gene GeneID:522383|NES:XM_002686008:385_cdna Constitutive 0 NULL GeneID:522383 3 GENE NES NULL nestin EMBV3_22340 TGTTTCCTCGGAACAACTACAGAAACCACAGTGACGGAGGGGGGTGTCAGTGCCTAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04128 CTGCAGGGCCATGTTCACCAGGTACTTCTACAACTGTGCTCCCTGAGATGCTAAAGTCCT Variant GeneID:616039|LOC616039:XM_002692340:144_cdna 179^306 2 EMBV3_08542 GeneID:616039 13 GENE LOC616039 NULL similar to Pancreatic trypsin inhibitor precursor (Basic protease inhibitor) (BPI) (BPTI) (Aprotinin) EMBV3_22133 TATGATGAGTTTCTGGAGAGAACGGTGGAGAAAGCTAAGCAGAGGAGAGTCGGGAACCCA Gene GeneID:281618|ALDH1B1:XM_002689722:62_cdna Constitutive 0 NULL GeneID:281618 8 GENE ALDH1B1 ALDH5 aldehyde dehydrogenase 1 family, member B1 EMBV3_01622 ACCAGGCTCCACTGGTACATCAACAAGACCACCCCTGCTGTCTCCAGATTGTGCTGTAAT Gene GeneID:505926|BCAT1:NM_001083644:22_cdna Constitutive 0 NULL GeneID:505926 5 GENE BCAT1 MGC148803 branched chain aminotransferase 1, cytosolic EMBV3_34797 TTCCACGTAGATGAAGGAGGATGAAGAGGGCAGGGGTTCCAGGGCTAGAAAGCAGAACAA Gene BVV0102_127205 + 0 NULL GK000019.2:37026397-37069931 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08982 CTCTCACTCCTGCTCCACGAGGTAAGGGCGAGCACGACTTCACTACAAAAACCTTTCACT Gene GeneID:527796|LOC527796:XM_002695747:446_cdna Constitutive 0 NULL GeneID:527796 19 GENE LOC527796 NULL similar to Putative serine/threonine-protein kinase F31E3.2 EMBV3_19859 CTCAGAGGATGATGAGGACATGCAGGACATTGGAAGGCAACGAACAGGATCAGGACCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37498 AGTGTTTTAGGGAGAGGAGGCTGCACGTAACGGGAGTGGGTGTTGATTGCTAAGAGCCTT Gene BVV0102_144571 + 0 NULL GK000013.2:63680574-63684234 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08372 CTGAGTGATCTGGGCTCCCCGTTATCCTAGCTCTCCCACCATGGGGTGGATCCTGTGACT Gene BVT0102_080375 + 0 NULL GK000001.2:83653008-83676970 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00008989 1 XLOC_004546 NonCoding TCONS_00008989 XLOC_004546 NonCoding NonCoding - 1:83669094-83669829 - TSS6066 735 2 TCONS_00008989_2 76 0.153741496598639 1 0 0 0 0 0 0 0 0 0 0.000289842551130607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XM_001789477.2 ERN1 PREDICTED: Bos taurus endoplasmic reticulum to nucleus signaling 1 (ERN1), mRNA. 2e-14 84.2 81.40 0.115646258503401 0 noncoding 0 0 0 0 0.0383705006247799 0.757508856799193 0.0199970800873531 0.703012411051855 GAGTCAATACTTGCTATCATCTCTGTAACAGATGTGGCTCTGTGCCTTCGTTGTAGCTTCTTATGCCCCTGGGGTCGTTGCTGCCTTGCTTCTGCCAGTGCTGCTGCCGTTGCACTGGGATGGTGGGCCCTTTCCTTGCCACTAATTTCCCCTGAGTCACAGGATCCACCCCATGGTGGGAGAGCTAGGATAACGGGGAGCCCAGATCACTCAGGCACTTCTGTTCTGGCTGGTGTGAAGGTTCATAGGCTCCACTGCGAGTCTTGGGGGAGGAGCCGAGAATATGGATGCCTCAGTGTCAGGAAGGATGGGGCCCCAGGCCCCACCGCTGCTGCCGCCCAGGTGTCTGTGGCCACTGGAGCTGCTAGAGTTGTGTGTTGCCTCCCCTGCTGCTGCCATGCCCTCTAGTGCTGTGGATTCAGCTGCCATGGCTAGAGGGCCAGGATTGCAGCCACCAATTCTGCTGTTCCTACAGTTCTCCTTCCTTGATGTGTACCAGTCTACTCTCTTTTAGATACAGATGTTTGAAATTCTGTGGCATCCTGGTGTGTTGGGCAGAGGTAACTTTGTTGAATTTTGGATATCTTACTGTAGATTGAAGGGGAGAGACAAAGAGAGATTTTTTTTTTTTAATTTATTTTTGGTTGTGCTGGGTCTTCATTGCTGCACGCAGGTGGTCTCTAATCACAGCAAGTGGGGGCTTCTCTTCACTGTAGTGTACAGGCTTCTCATTGC TCONS_00004368 . 3' 7142 TCONS_00004368 . 3' 7876 EMBV3_07161 TGGATGCTAACCGGAGCCAAGTGCTTCCATTTTCTGATGTGGACGTGGTAACTTCTACAG Gene GeneID:528207|FASTKD2:NM_001102117:32_cdna Constitutive 1 NULL GeneID:528207 2 GENE FASTKD2 MGC151610 FAST kinase domains 2 EMBV3_26898 CTGTGCTGACAACCTCATCAACCATTTCATGTGTGACATCCCACCTCTCCTTGAGCTCTC Gene GeneID:513334|LOC513334:XM_002699196:71_cdna Constitutive 0 NULL GeneID:513334 29 GENE LOC513334 NULL similar to olfactory receptor 874 EMBV3_39775 AGAGAAAGGCACTGGGGAACTTGGGGACTTTGGGTCAATTCCGCACTCTGGACACAAGCA Gene GeneID:785815|HR:NM_001102535:15_cdna Constitutive 0 NULL GeneID:785815 8 GENE HR MGC143204 hairless homolog (mouse) EMBV3_31453 GCTTACATTTTGAATTGGAATGCCTGACCCCCAGGAAAGGGAAGCAGGAGTGCTGAGTTC Gene GeneID:508358|SYVN1:NM_001101899:545_cdna Constitutive 0 NULL GeneID:508358 29 GENE SYVN1 MGC166357 synovial apoptosis inhibitor 1, synoviolin EMBV3_15575 GGATCTCTGCCAGGCAAGGCTGTCTTAGAGAAGAACCCCAAAGTCAAATTGTGGTCTACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31614 GCAGCATTCCCAGAGGATTCAGTACTCAAGGTGAAAAATTAGATAATTTTCAAAGCTGGA Variant GeneID:510950|KIAA1712:NM_001076833:26_cdna 213^269 3 EMBV3_30396 GeneID:510950 8 GENE KIAA1712 MGC143238 KIAA1712 EMBV3_34650 GAGCCCAAGAAGACACTGGTGTGAAAGGTACAATCTCAGAGGTTGGTCAATTACCGTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00328 GGCGAGTATGCTTCCTCTAGTGCTTTTGGAGCCCCTGAAGTATTTCTGCATCAGTTCTGG Gene GeneID:540456|C24H18ORF10:NM_001102244:115_cdna UTR3_Alt 3 NULL GeneID:540456 24 GENE C24H18ORF10 MGC152138 chromosome 18 open reading frame 10 ortholog EMBV3_14781 AGCCTGCTTCAGGTGCTCAGCAGGTGAGATGGAGACACAGCCCCGAGAGTTTCTGCAGGT Gene GeneID:614520|BNIP1:XM_002696254:22_cdna Constitutive 1 NULL GeneID:614520 20 GENE BNIP1 MGC133975 BCL2/adenovirus E1B 19kDa interacting protein 1 EMBV3_26731 CCAGGGGATCTTCTTGACCCAGAGATCAAACCTGGATCTCCCTCTTTGTGGGCAGATTCT Gene BVT0102_089440 + 0 NULL GK000026.2:31935739-32963399 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39543 GTCACTTCTGAACTGTGTAGGGGCTGATTTTACAGTTTGTGGACTATTGATGCCCCTTGC Gene GeneID:536508|DPY19L1:XM_002686820:72_cdna Constitutive 0 NULL GeneID:536508 4 GENE DPY19L1 NULL dpy-19-like 1 (C. elegans) EMBV3_41445 GGAAGCGTGTGTGTTTTTGTTTGTATGTGGCTGTATAGGTTGGATTGAATGAGGGAGAGA Gene GeneID:534440|INSIG2:XM_002685428:29_cdna UTR3_Alt 1 NULL GeneID:534440 2 GENE INSIG2 NULL insulin induced gene 2 EMBV3_14525 AGGCGGAGGCCTCCGCCGAGCGCGTGAGAGGGTGCACAGATCATAGTGTTTCCAGAAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23799 CCTGAACACATATAAGTGTACGTGTATAAGCCCACCAGCATGTTAATTGTCAGTGGATGG Control NULL NULL 0 EMBV3_39940 NULL NULL NULL NULL NULL NULL EMBV3_30021 TCAGGGCATCTATGTACTTCAGGACAACAAATTTCGCCTGCTTACTCAAATGTCTGCAGG Gene GeneID:521470|TRAPPC6B:NM_001038134:23_cdna UTR3_Alt 4 NULL GeneID:521470 21 GENE TRAPPC6B MGC133693 trafficking protein particle complex 6B EMBV3_00175 GGCAGCAGGGCTCAGCTGTTCTCTTGTAGCACACACTCACTTTTCTGAGTTCTGTGCATT Gene GeneID:509620|FTSJD2:NM_001082430:23_cdna Constitutive 0 NULL GeneID:509620 23 GENE FTSJD2 MGC148378 FtsJ methyltransferase domain containing 2 EMBV3_38557 GGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTGACTAGCAATGTGACG Gene GeneID:613751|GPBP1:NM_001076287:18_cdna Constitutive 0 NULL GeneID:613751 20 GENE GPBP1 MGC139708 GC-rich promoter binding protein 1 EMBV3_12268 TTCGTGGGACAAGGTAAGCGGACGGAGGTTCGACGGCCAGCACTTGCCACATATGGGTAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24134 ATTCGCCATCCTATACACAAAGCATCGGAGGCTGCAGAACAGCTTCACGGCTTTCGCCAA Gene GeneID:533166|SORL1:XM_002693087:438_cdna UTR3_Alt 2 NULL GeneID:533166 15 GENE SORL1 NULL sortilin-related receptor, L(DLR class) A repeats-containing EMBV3_19001 TTCGTGGTTTTTCTCTAGTTTGGAAATTCACCCATCATGTTCACTAGGGACGGTTTTCCT Gene GeneID:514660|TGFBRAP1:NM_001102008:26_cdna Constitutive 2 NULL GeneID:514660 11 GENE TGFBRAP1 MGC152624 TRAP-1 TRAP1 transforming growth factor, beta receptor associated protein 1 EMBV3_15588 AGTAAACAGGGTGCCCTGTGGAACCGGGTGCGGGTGTTCCCCTACATCTCTGCCATGGTG Variant GeneID:539289|LMAN2L:NM_001014953:89_cdna 315^548 3 EMBV3_33391 GeneID:539289 11 GENE LMAN2L MGC129002 lectin, mannose-binding 2-like EMBV3_10745 CCGCCTGCCCCTGAGCCATGTGCTGGACGTCCTGTGGTTCCACCACGTCCAGCAGTCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24250 CTGTAACCCTTTGAGGTACAATACCATTATGAACAGCCACACCTGCATCTCGGTGGTGAC Gene GeneID:614281|LOC614281:XM_002687113:445_cdna Constitutive 0 NULL GeneID:614281 4 GENE LOC614281 NULL similar to odorant receptor ORZ6 EMBV3_32574 GTAATACAAACCTGTGCCTGCTATTAGTGAAAGTGACGTAGCGGGATTTAAACCAGAATG Gene GeneID:615652|TTC8:XM_002691089:212_cdna Constitutive 0 NULL GeneID:615652 10 GENE TTC8 NULL tetratricopeptide repeat domain 8 EMBV3_32014 TGCCAAGATGCTGCGAGCCCTGAGCTCTCCCACAAAGCCTATAGAGAGGTCCAGCCAGTA Gene GeneID:282328|PSMB10:NM_001034040:51_cdna Constitutive 1 NULL GeneID:282328 18 GENE PSMB10 MGC127213 proteasome (prosome, macropain) subunit, beta type, 10 EMBV3_29275 CTAAAGAAGAGAGAAGCACAGGTGGAAAAGATACCCATGGAAGCCCAGGTTGGGAAGGAG Gene GeneID:100336848|LOC100336848:XM_002688581:290_cdna Constitutive 0 NULL GeneID:100336848 7 GENE LOC100336848 NULL hypothetical protein LOC100336848 EMBV3_37486 GGAGGCCCTGCTGCACCTCATCCAGAATGACGACAACTTCTTAAATATCATCTACGAGGC Gene GeneID:514548|DCP1B:NM_001034467:25_cdna Constitutive 0 NULL GeneID:514548 5 GENE DCP1B MGC127127 DCP1 decapping enzyme homolog B (S. cerevisiae) EMBV3_15066 AATTTTTCAGATAAAAATATAGATGCAATTATATCTGGGAGGCAATTACATTGCTGTCAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29918 TGCTGGAGGATTAGTGCTGTTGCTCCCAGAAACCAAAGGGAAGACTTTGCCTGAGACCAT Gene GeneID:521027|SLC22A2:XM_002690371:28_cdna Constitutive 0 NULL GeneID:521027 9 GENE SLC22A2 NULL solute carrier family 22 (organic cation transporter), member 2 EMBV3_26678 TTCCAGCAGAAGTTCCACAGGCACATGATAGACCTGTCCCACATCAACGTGGCCCTGATT Gene GeneID:511489|RBM33:XM_002686984:819_cdna Constitutive 0 NULL GeneID:511489 4 GENE RBM33 NULL RNA binding motif protein 33 EMBV3_12459 CATAGAATAAGATGTCTTTCCAAGTTGAAGGAAATCTTTTGTTGATTATATTCGTGAGCT Variant GeneID:282472|SLCO1A2:NM_174654:10_cdna 228^369 3 EMBV3_40646 GeneID:282472 5 GENE SLCO1A2 SLC21A3 solute carrier organic anion transporter family, member 1A2 EMBV3_22752 CATCAAGCCTGACCGAGCCCACCACTGCAGAGTGCAGCTCCTTCTCGCCGCCCACCACGG Variant GeneID:506728|ZDHHC3:NM_001075278:89_cdna 711^889 1 EMBV3_12113 GeneID:506728 22 GENE ZDHHC3 MGC140627 zinc finger, DHHC-type containing 3 EMBV3_25539 TAACTTGTGTTGACACAGTGAGGGAAAAACAGGGATTCTACTGCTCAGAGGTGGCTTCCC Gene BVV0101_052472 - 1 EMBV3_10794 GK000020.2:10117675-10127242 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01588 GGCTGCTTTACTGTCATCTGAGCTTTTACCAGTAGACTCAATGAGGAATCATTCTAACAG Gene GeneID:282235|GABRA1:NM_174540:5_cdna Constitutive 2 NULL GeneID:282235 7 GENE GABRA1 MGC137550 gamma-aminobutyric acid (GABA) A receptor, alpha 1 EMBV3_32373 AGTATGATGAGAAGACAAACGAACTACTTGCCCATATTCGTGCGCAAAGACACCAAGATG Variant GeneID:516908|DPCD:NM_001075745:147_cdna 178^302 4 EMBV3_13266 GeneID:516908 26 GENE DPCD MGC137186 RP11-529I10.4 deleted in primary ciliary dyskinesia homolog (mouse) EMBV3_01827 CTTAGGAATATAGGCTCCCTTTCATCCAGGCCGATCCGGCTACTTGCCCTGATAGTACTT Gene BVT0102_183322 - 1 EMBV3_35257 GK000002.2:6101742-6213565 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31668 GGGAGCAAACAGTAACTGCTCCAGTGACAAAGGAATGGTAGATATGGCAGGAAACTGAGC Gene BVT0102_009691 - 1 EMBV3_09580 GK000025.2:2726204-2733864 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22508 AACCTAGGGTTTTTAGCCTGGGTATGTAGGTTGAGGCCAAGTCCCTCTGCAGGAAAAAGC Gene GeneID:281294|MAP2:XM_002685550:158_cdna UTR3_Alt 2 NULL GeneID:281294 2 GENE MAP2 NULL microtubule-associated protein 2 EMBV3_21972 TTTGCCAGCCCCACCGAAGAGAACAAATTTCGGAGACTTCCCTCCTCTTACACAGTGGAG Gene BVT0102_161962 - 1 EMBV3_16505 GK000007.2:98924530-98947943 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214712 TCONS_00214713 TCONS_00214709 TCONS_00214710 TCONS_00214708 TCONS_00214711 1 XLOC_130751 Coding TCONS_00214708 XLOC_130751 Coding Coding LOC100296257 7:98913674-98944000 j TSS160528 1661 1 TCONS_00214708_3 495 0.0638169777242625 10 0.94555647155812 2.31292055158204e-11 0.000234888901387909 0.000136564922348839 1.19749275011189e-10 4.14897818120973e-05 4.67479288994764e-12 9.71524809407901e-12 6.18310475483723e-05 0.000269520034068661 6.81539074775312e-12 0 0 3.3906517131592e-13 3.11036991985015e-11 3.41553734998748e-05 0 0 0 0.000303559183492026 0.000326959990457866 2.29434130481847e-11 0 0 0 0.000139364336274939 0.000325317707992025 0.000374921088388243 0 0 0 XM_002704677.3 LOC100296257 PREDICTED: Bos taurus 2'-5'-oligoadenylate synthase 1-like (LOC100296257), mRNA. 0.0 2462 100.00 0.821192052980132 TCONS_00214708_3 sp|P00973|OAS1_HUMAN OAS1_HUMAN 2'-5'-oligoadenylate synthase 1; 1e-30 123 28.76 0.563636363636364 1 coding 0 0 0 0 0.0644198033906366 0.571833936828168 -0.0172844571200799 0.733247228089669 GAAATCAGGAGGACACTTGCTGGAACAAATGGACCAGGTAGTTGCTTGGACTCTGAATACCCACAAGGGGCCAAGGAACCACAGAGGAAAGGCGTGTCTGGACTTACCTTCTGGCTAGCTCGCCAAACCTGTCACTGAACCAGGATCTAAATCTGATCCTTCACTGGGAAAGGATGTGGACTCTGAAATCCTACAACTGTGAGCACTGCGGGAGTGACTTTATCAGCGGCAGGGCTCTGAAGTATCACTTTCAACAGAAGCATCTTGGAAAAGTTCACCGTGAAAAATGTGACCAAGAAGTCCTGAAGGGGAAGCAGCGAGGTCACAGTGAGTCTACACGTGACAGGTCAACCATGGAGACACACAAGCTACACTGGGAAAATCTAGAAGAAAGGAATGGAAAATATATGGATACAAACATATCAAAAACATGTAGGATGTGTTCTAGACGCTTTGGGACAGTCCTTAGTCGGGAGAACCATGAAATACAAGACCATCACTTTACAGCCCGCAAAAGAGCCCAAATGTCCACAGGATTTTCACCTCATAATATGTTGGAGTGTAAAGGTCCCCAAGAGCTACAGAGATTTGCAGACCGAAAAATCTGCCCTGCCTCTGGTTCTCAAAGAGCTGCTTGTGCAGCTGAGATCGGTACCCTGCTCCAGCTGATCCAGACTTCCTTTCCGGTGCCGGCCTCCCGAGTGATCCAGGGTGGTTCTTATGTGAAAGGGACCGACACCCAAGGATGCTCGGAGATTGACATCATCCTGCTCAGTGAGGTGTTTGCCGATGTGAACCATTTCAAGAAACAACTGAGAGAAGGGTTGGAGACTCTGAGAGAAAGCTTGACGCGAACTGCATATGGGAACAGGATACTAATGGGAAAGAGAACACCACTGTCTCTAAGATTCAGTTTTTTATGTACTGAAAGTCTTCACAGCCATTCCTTTGAGATCATGGCTTACTATGATATCCTGGGACCTACACCTTCCACAGATTTAAAACTTCACCTTTACTGCAAGCTATACCCTTGTAAGGACAGTGACGAGGCCCAGCTGTGTGCCTTGGCCCTCGTACGATACCAAGTGGATTTCGTCAAGGCCTCTGTCGTAAGGGTGAAGGAGCTCATTCGTTTAATGATACATTGGCTCAAGACATCATTTGCCAGCCCCACCGAAGAGAACAAATTTCGGAGACTTCCCTCCTCTTACACAGTGGAGCTCCTCACCATATATATCTGGGAACGGGCGGAGAAGCCCCTGTCCTTCAGCCTGGTGCAGGGAATGAGGGCAGTCCTCAAACTTCTGGTTCAATACGCAGATATCGACGTGGTTTGGCACCGACACTATCCTCGCAAGTTCCCCGTTCTTGTAAAAGTTACCCAGAAGCGCACGAGGCCATTCATTTTAGACCCTGTAAATCCTACTGTCAACGTGTGTGACACCTGCAATGCCTGGGATGAAGTTGCCCATGTGGCGAAACTTAGCTTACGGAAGCCTCTCTTCAGCGGATTCTGGATTCACCACTGCCGGGAAGAGAATGTCTCACTCTGCTACGATGTAAGAATGAAACTGCTGGCCGCCATCTTGCTGCTCCAAGGGGAGAGAGCCTTACTAAAAATGGAGCCAACACAAAAGAAAGGAGATTTGAGAAATGAGTAG EMBV3_21725 CTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAA Gene BVT0102_447185 + 1 EMBV3_37935 GK000026.2:14012062-14042392 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00110189 TCONS_00222868 TCONS_00175509 TCONS_00220566 TCONS_00118040 TCONS_00238581 TCONS_00210913 TCONS_00251678 TCONS_00219592 TCONS_00226167 TCONS_00179680 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00133817 TCONS_00123823 TCONS_00001867 TCONS_00160960 TCONS_00137167 TCONS_00174808 TCONS_00174809 TCONS_00174807 TCONS_00232829 TCONS_00132066 TCONS_00022895 TCONS_00250669 TCONS_00107436 TCONS_00198905 TCONS_00078426 TCONS_00063197 TCONS_00203998 TCONS_00174805 TCONS_00170890 TCONS_00206300 TCONS_00171428 TCONS_00242416 TCONS_00207933 TCONS_00205125 TCONS_00174806 TCONS_00153178 TCONS_00056149 TCONS_00118487 TCONS_00125692 TCONS_00002600 TCONS_00091907 TCONS_00242415 TCONS_00109592 TCONS_00001866 TCONS_00031759 TCONS_00110426 TCONS_00206299 TCONS_00218430 TCONS_00246741 TCONS_00001865 47 XLOC_066093 XLOC_136175 XLOC_105290 XLOC_133883 XLOC_072206 XLOC_145248 XLOC_129423 XLOC_154619 XLOC_132911 XLOC_137940 XLOC_109452 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_081223 XLOC_075375 XLOC_000454 XLOC_097853 XLOC_083377 XLOC_104695 XLOC_142312 XLOC_080699 XLOC_013565 XLOC_153612 XLOC_063346 XLOC_120558 XLOC_047314 XLOC_037924 XLOC_124314 XLOC_103679 XLOC_124877 XLOC_103815 XLOC_149080 XLOC_126448 XLOC_124587 XLOC_092943 XLOC_033952 XLOC_072644 XLOC_077234 XLOC_000643 XLOC_056677 XLOC_149079 XLOC_065496 XLOC_018004 XLOC_066330 XLOC_131750 XLOC_151107 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_29595 TGGTTCGCTTTGAGGTGATCTGAAGCCACGGCCTTCTGGAGCTTCGTTGTGTGTCCCCTT Gene GeneID:540849|YLPM1:XM_002691007:328_cdna Constitutive 0 NULL GeneID:540849 10 GENE YLPM1 NULL YLP motif containing 1 EMBV3_17683 GATAGCAAGTTCCCAGAGATCGCTTGTGGATGAGTGGATTCAGTGTGGAATGTTTGCCAA Gene BVV0101_084925 + 1 EMBV3_30048 GK000008.2:61579898-61611660 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19962 TTCCTCTTTTACACCAGTAGGCCAGGACCTGACTTGGAAGCCTTGATAAGCAGGGTGTGT Gene GeneID:522909|LOC522909:NM_001015629:126_cdna Constitutive 0 NULL GeneID:522909 21 GENE LOC522909 NULL hypothetical protein LOC522909 EMBV3_02627 CTCACAGACTTAGAACTTATGGTGGCCAGAGGGGAAGGGATGGTTAGACATTTGGGAAGG Gene BVT0102_031679 + 0 NULL GK000025.2:22547166-22713577 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25131 TGCTTGTGGTCTTTCAAGTCACAGTTCAGCATCCTCTTTGAACACAGCCCAGAGGCAGAG Gene GeneID:616969|LOC616969:NM_001102307:169_cdna Constitutive 0 NULL GeneID:616969 20 GENE LOC616969 MGC154970 Rho-guanine nucleotide exchange factor EMBV3_29516 CCAGACGGGGCGTGAGATGAAACTGCGTATCCTGTCTGAGCGTAAAAAGCCTCTGAACAT Gene GeneID:282095|TNNT1:NM_174474:124_cdna Constitutive 0 NULL GeneID:282095 18 GENE TNNT1 NULL troponin T type 1 (skeletal, slow) EMBV3_41868 AAGCCCCCACTTGCTTCTGGGGCTTTTGCTGTAAGGATAGCAGAGTCCAAACCTTCAAGG Gene GeneID:537999|NWD1:NM_001102210:101_cdna UTR3_Alt 2 NULL GeneID:537999 7 GENE NWD1 MGC166244 NACHT and WD repeat domain containing 1 EMBV3_23024 GCCTCAAGGTAGTAGAGGGGGGCCAGGATCCTACTAGGGAGAGCTATTTTCTTGTGTTTA Gene GeneID:509367|CLEC14A:NM_001077890:14_cdna Constitutive 0 NULL GeneID:509367 21 GENE CLEC14A NULL C-type lectin domain family 14, member A EMBV3_35695 TTATCCACGTGCTGGCTTGCAGTAGCTCCTCTTGCCTCAGGGCCTTTGTTTGCTTTGTGT Gene BVT0101_003653 + 0 NULL GK000005.2:113350951-113377701 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193541 1 XLOC_117506 Coding TCONS_00193541 XLOC_117506 Coding Coding CCDC134 5:113335226-113352994 = TSS144619 3373 1 TCONS_00193541_3 229 0.0420990216424548 7 0.810547644509484 0.000976157582638158 0.00134058568320229 0.00144512874492556 0.00010586380502196 0.000544509281454764 0.000553579570325387 0.000566278909067458 0.000326159693483794 0.00031780400390873 0.000583930925273269 5.95397002403394e-05 3.82327923155254e-05 0.000192249693150351 7.13433563959799e-05 0.000103861789906382 0.00314777882307162 0.000689094450334116 0.00199712009571669 0.000637794201852251 0.000796147889953543 0.000155701738592303 0.000415804843284443 9.44881635293675e-05 0.000839972538260401 0.00106401907855653 0.000311463648859843 0.00096861176558418 0.000268792227596855 0.00025330855551333 0.000408853795600188 XM_005207392.1 CCDC134 PREDICTED: Bos taurus coiled-coil domain containing 134 (CCDC134), 0.0 5492 99.77 0.905425437296176 NM_024821.2 CCDC134 Homo sapiens coiled-coil domain containing 134 (CCDC134), mRNA. 0.0 1260 83.51 0.361102875778239 TCONS_00193541_3 sp|Q8C7V8|CC134_MOUSE CC134_MOUSE Coiled-coil domain-containing protein 134; 8e-134 380 88.21 0.995633187772926 1 coding 0 0 0 0 -1.9611604715259 0.0107252867988779 0.00210728806048432 0.964205771896576 GTGGCACGGTGGGCGGGGACAGTAATCGGCGGTCCGTGTGCTGCTACTCGCGGGCATTCTATGAGAATCCACGGCTCTGCTGGTCGCTAGTAGACCCTCGAGTCGGTTGCTGCCTGACTCCTGCCCCCCCCGCCCGCCTGGCCCGCTCCAGAGTCTTGGATATGGACCTTCTTCAGTTCCTGACCTCCCTGTCTGTCCTGCTATTGTCTGGAACAGGAGTCACAGACACCCTGAGGACCTCCCTGGACCCGAGCCTGGAGATCTACAAGAAGATGTTTGAGGTGAAGCGGAGGGAGCAGCTGTTGGCACTGAAAAACCTAGCACAGCTGAACGATGTCCACCAGCAGTACAAGATCCTGGATGTCATGCTCAAGGGGCTCTTTAAGGTGCTGGAGGACTCCCGGACAGTGCTCACTGCTGCAGGTGTGCTCCCAGATGGGCCCTTCCCCCAGGACGAGAAACTGAAGGATGCTTTCTCCCAAGTGGTGGAGAACACGGCCTTCTTCGGCGACGTGGTGCTGCGCTTCCCAAGGATCGTGCACCACTACTTTGACCACAACTCCAACTGGAACCTCCTCATCCGCTGGGGCATCAGCTTCTGCAACCAGTCGGGCGTCTTTGACCAGGGCCCCCACTCACCCATCCTCGGCCTGATGGCCCAGGAGCTGGGGATCAGCGAGAAACACTCTGACTTCCAGAACCCATTTAAAGTAGACCGCACAGAGTTCATCTCCAGCACTGACCCTTTCCAGAAGGCCCTGAGGGAAGAGGAGAAACGCCGGAAGAAAGAAGAGAAGCGGAAAGAGATCCGAAAAGGCCCTCGGATCTCAAGATCACAGTCTGAGTTATAGCCCTGGAGCGGGCCAGGGCTCACAGGACCAGGAGACGGCCAGTTGGGAGGAAAAGGACATGGCAGAAGCGTAGCTGATGGTGAGCACTGGTGCCTTCAGAGAGGAGGCCAGAGTCTGCTTGGCCCCCTGGGGCTGGCTCCGAGCCCTCACTGAAGGGACTGGGCCACAGAAGGCTGGACTTCCTCCCAGGGACCTCCTCGGAGGGGTGCCAAGGGATCTTCCAGAGAGTGCTGTTCTGCAGACCTAACCCTGTGGAGATGCTGGGGGAAGCAGGAAGGATCCTGGGCTGGATATGATACCCACCACCGTCGCTCACGACCGCTGGCCTGCTGGCAGCCACTCCTCATGGGGAGGCTGCAGAACTAGGCTCTGAGCCATGTGCAGAGGTGTCATGCCTGCTGCTGGGCCCACTGTGCCACTGAGTTGCCAGGCACAGATCCTAGCCCCCTGCAGAGAAAATAAAAGCCAGCAAATGCTCTGGGCTGACCGAGGCTGGTTTGGGCCCCAGGGAGATGTGAGCCTCTCCACAGAGCAGGTAAAGGGGGCCTGGGCAGGGGGATCTGGGGCCCTCAGCTGTAGAGACCACCTTAGAGAATGTTCTGCCTACCCAGGAGGAGCCTCAGGCCCTGGCAGGGCAGCAAAGCAGAGGCTTGGCTTTGGTCTCCTATTCCCTTCTCAGCACCGTCCTTGATGAGGGGTCAGTGTTGGGAAGGGACCAGAAGTACCCTTCCTGGGAGGGTGTTTAGCTCAAGACAGTCTTGGAGCAGCCTGATCTCTGTCCTCAGGTATTGAGGGACAGTCATTGAGCAGGCAGGCCCAGGGAAGAATCAACTTGTCCTCTCTGGCAGTTCAGGGAGCCCCTGGGCCTGTTGGGGGCGCTGTTGGGGAACAGGCGAGAGCTCTGCAGGAGGCTGTACTTTGTAGCGGAAGGGCTGCTCCCAGGATGGATGGGCCAGACAGCAAGCCCCCTGTGTCAGGAGGCCTGTAAGCAGAGACCAGGGCCAGGGGGGTGGGAAGCTGCAGAGGGACTCAGGCCCTGAGTAGGCAGCCGCCCTTCAGTCATGCCCCTCCCAGGCAGAGAAGGGAGGGGCTCTGGGGGGAATTCTAGCTCTGTCTCTTGACTTTGCCAAGCCAGGGAAGAGACACACAGCTATCCCCAATATCCCACCACTAACGGAGCCCAAGGGAGACCCAGGGTCTTAGCCCATCAGACTTGCTGAGTGACCCTGGCCCACCCCTTCCCTGTGCTGTGGCTTCATTGGTGTAATGAATTTGATAATGCCTGAACCCTCTGCCCAGCCCTAAACTGCTTCTCTGAGGTTGGGGCCTGGTTTCTCAGTGACAAGAGCCCTTCTCTGATGGTTCTTCATTCATCCCAGAGATGTGGTGAGCGCCCACTGTATGCACAGCCAGAGAGAGAGGGGCCCAGTCTTAACCAGTCTTCACTTCTGCCCCATTTTAGTACCTTTATCCTCTGGAACTCCTCCTTCTACACCTTCATTTCTCTCCGGCTCAGTTGATGCCTTCCTCTCCACCCTCCAATGAGCCCACGTTTTCCCCTCTGACACCTTGAAAGGTACAAACAGAACCACTCTGCTCTCTTCCTCCCTGGGCAGGTCTAGCTGGGAGCTGAGGGAACAGCTGCAGAGTGGGAGGCACTGTGCCCACTTACCTGACCTGGTGCTCAGGCAGCCCTCTGCGGTAGCTTACTGAGGCTCTGGGATGGGAGGGGCATTGAACCAAAGTGAAAGTACACGGTGTGGTGTGCCAGCAGACTACCCCCTAGTGTGGGAGCCCTGCGAGAGCCACTGGTGGTGGAGTTGAAGGTGGCACTGTCCAGCTCAGTGCCTGGCCAGAGCAGGGCAGCAGGGTTTGGTTTTCTGTTTCAAGGTGAGACTTCTATCATCTGTATCAACTCTCCTGCATGTAAACAATGAAAAGAACATTTGTGTCTCCCCTACCCTCCCCATAAGGTACTTTGCTATACATGTTGATTATAAAAAGTAATTTTAAGTAACACTGATATGCCAAGAAGAAAGTATGATTCACCCTAATCTCACCACTCCATAACCATAACTGAGGCTCAACTGTTGGACCTTCCATCCTTTTTGCCCTTCATGTGCACACAGATCACATGTGATTTTCAGTTACCGATACAGTAGCTACCTTGTATGAGCACTGTGTGTCAAGCCTTATCCACGTGCTGGCTTGCAGTAGCTCCTCTTGCCTCAGGGCCTTTGTTTGCTTTGTGTGTTCCCCTGGCTATACCAGATGCAGTTGTCACCACAGAATTTTAGGTTTCCTCTTAAATATCAGTGTCTGTTTAATTCAACGGACTGGAAGCTCTCAGAGGGCAGGAACTGTGTCTTTGCCTGCCACAGAGATACTCAATAAATACTGTCAAATGAGTGTGCAAGTGATCTCATTTCATCTTCACCACTCCCAGGGGGCACTGTTCCCCTCGTTTTTTAGAGATGACAAAAATGAGAAGGAAAACAAAACAGAAGTTATTTAACCAGCCC EMBV3_34902 CCTCAAGGCCGGGGGCAAGATCCTCACCTTCGAGAGGTGTACAGGCATTTCGGCAAGGCC Variant GeneID:509163|RPL18:NM_001015556:163_cdna 392^458 3 EMBV3_22303 GeneID:509163 18 GENE RPL18 MGC129138 ribosomal protein L18 EMBV3_12100 ATTTCACTTTCTCTGAGGAAATCCCAGGCCCTTTGTGCCCTTGCTGAATACACAGAGGCC Gene GeneID:533459|BTK:NM_001034589:23_cdna Constitutive 0 NULL GeneID:533459 X GENE BTK MGC126902 Bruton agammaglobulinemia tyrosine kinase EMBV3_11539 TATACTATGTATGGATGAGAGCAATCTGAGGGCAACGACGCCGACTTTGAGACCGTCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27872 GTCAGCTTCAGAAGAACCAGAGAAGGCATTCAAGTGACACGGTTCTCAGCCCCCAAGCAC Gene GeneID:508367|MAP3K14:XM_002696052:356_cdna Constitutive 0 NULL GeneID:508367 19 GENE MAP3K14 NULL mitogen-activated protein kinase kinase kinase 14 EMBV3_34235 CCATCGGCAACCTTAAGAAGCTGATGATAGCTCAAACTGGCACTGGACAGAACAATATCG Gene GeneID:100295962|LOC100295962:XM_002685475:176_cdna Constitutive 0 NULL GeneID:100295962 2 GENE LOC100295962 NULL similar to ubiquitin-like 5 EMBV3_39973 GGCAACCTCTGAACCAAGTACTAAATTTTCTCGTACAGAAATCCGTAGGGGTGGAATGGG Gene BVV0102_208166 - 0 NULL GK000001.2:82161529-82176393 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00004246 TCONS_00004240 TCONS_00004247 TCONS_00004250 TCONS_00004249 TCONS_00004244 TCONS_00004241 TCONS_00004242 TCONS_00004248 TCONS_00004245 TCONS_00004243 1 XLOC_001000 Coding TCONS_00004250 XLOC_001000 Coding Coding SENP2 1:82175874-82213554 j TSS2137 3030 1 TCONS_00004250_2 569 17 0.920035032776878 0.000591602952602509 0.00077875625199881 0.00147170390380295 0.000888715672192857 0.000447065199140482 0.000165612412585772 0.000956161952687719 0.000145400616425123 0.00265562701195945 0.0012474229954991 0.000334446077443122 0.000410652789716532 5.10465935751471e-08 0.000425687240450416 0.000208971002144224 0.0249243573555628 0.00961920317543114 0.00347285512772249 9.16098250181294e-08 9.17099105121484e-06 3.80346941857164e-14 0.00856399425365378 0.00855188073676189 0.00560180139293894 0.000974534901455012 0.00133083852898746 0.000256533405078347 0.000567452194666558 0.00251380851156283 0.00709196520008182 XM_005201518.1 SENP2 PREDICTED: Bos taurus SUMO1/sentrin/SMT3 specific peptidase 2 (SENP2), transcript variant X2, mRNA. 0.0 5265 100.00 0.963036303630363 NM_021627.2 SENP2 Homo sapiens SUMO1/sentrin/SMT3 specific peptidase 2 (SENP2), mRNA. 0.0 3629 87.40 0.963696369636964 TCONS_00004250_2 sp|Q9HC62|SENP2_HUMAN SENP2_HUMAN Sentrin-specific protease 2; 0.0 1068 90.41 0.987697715289982 1 coding 0 0 0 0 -0.0551409951407205 0.685907168429783 -0.0634542374834832 0.396781107086444 CTTTTTAGAAAACTAGGGTAACCAGTTAGGAAACCTTAGGAAATCTTAAGCAATGCGGTTGAGCTCCTCTGATGGTCCACGGGTGCACATTATCCAAACCAAGGGCAGAAATCACTCTGTTTTCTACAGTGGACGCTGATGAAATACCAGCCAAAAGACCAAGATTAGATTGCTTTATTCATCAAGTGAAAACCAGTCTGTACAATGCTGCCAGCTTGTTTGGATTTCCATTCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTTGTAATGGAACACGGAATGTGGTCCCTTCAGGAGAGGTGTTTTCAAACTCTTCATCTTCTGAACTGAACGATTCTGGATCCTGGAACAACATGCTAAAACTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTAACTCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTAGGTTTTGCTTTGAGCTCAGAAGGCTATACTAGAAGACCAGGTGGCCGTCGCCACAACAAAGGCAATCCAGAGAGTTCTTTAATGTGGAGGCCTCAGGAGCAGGTTGTAACAGAGATGATTTCTGAAGAGGGTGGCAAGGGTCTGAGGCGTCCTCATTGTACTGTGGAGGAGGGTGTTCAAAAAGAAGAAAGAGAGAAATACCAGAGGTTATTGGAGCGACTTAAAGAAGGTGGTCATGGAAATTGTGTTTCTCCTATAACTTCAACTCATCAAAGTTCTCAAAGAAGTCAGATGGACACATTAAAGACCAAAGGCTGGGGGGAAGAGCAAAGTCATGGAGTCAAAACAACTCAGTTTGTTCCAAAGCAATATAGAGTTGTTGAAACAAGGGGACCTCTGTGTTCAGTGAGAAGTGAAAAGAGGTGTTCAAAGGGGAAAATTTCTGATACAGAAAAGACAGTTGGAATCAGACTAGAAAATGAATGTAGGAGGGGACTTCAGCTGGAACCCGACCTGTCTGAAGAAGTGTCAGCCCGACTCCGCCTGGGTAGTGGAAGCAATGGCTTACTCAGGAGGAAAATGTCAATACTTGAGACAAAAGAAAAAAATTGCTCAAACAAAGAGAGGGATAAAAGGACAGATGATCTTCTTGAACTTACAGAGGACATGGAAAAGGAAATCAGTAATGCTCTAGGGCATGGCCCACAGGATGAGATCCTAAGTAGTGCTTTCAAATTACGAATCACTCGAGGAGATATCCAGACCTTGAGGAACTATCACTGGCTCAATGATGAAGTCATTAATTTTTACATGAATCTCCTGGTGGAAAGAAATAAAAGGCAAGGGTATCCAGCACTTTATGCATTCAGTACTTTCTTCTATCCGAAATTAAAGTCTGGGGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTCAGTCTCTTTGAACAGGAACTAATTCTGGTGCCTATTCATCGGAAGGTACATTGGAGCCTGGTGGCTATAGACCTAAGAAAAAGGTGTCTTAAATATCTGGATTCTATGGGACAAAAAGGCCACAGGATCTGTGAGATTCTCCTTCAGTATTTACAGGATGAAAGTAAGACCAAAAGAAATATTGACCTGAATCTTTTAGAGTGGACCCACTACAGCATGAAGCCACAGGAGATTCCTCAACAGTTGAATGGGAGTGATTGTGGAATGTTTACTTGTAAATATGCAGATTATATCTCCAGGGATAAACCTATCACATTTACTCAGCACCAGATGCCTCTGTTCCGGAAGAAAATGGTGTGGGAAATCCTTCATCAGCAGTTGCTGTGAGAATGCCCCGCCCCGCCTCTCCAGCTGCTGGTGGTTCTTTCATGGACGGACGTTTCCATATACCTCATGCATTGTGGGTTAAGAAGTCCCTGCATCACCTCTGTTCTCTCACAGGTACTGAGCTGTCAGAAGTGCATGAAGGCCTCTCTCTGCACCCTGGTCCTGACTTGGTGTGCAGCGGGCTACTTGGAACCCTGTTTATAAGGCTGTGCCTGCTCAGAGCCCTGGACTATCAACCCACACAAGAACATATGCTAATTAATACTTTTTTTTTTTTTTTTGAGATTTTTTTTTTCCCTATGAACGTGGGAAGTGCAGAATTTATTTTATGATTTTTCTTTGTGTTTGTTCACGTATATTCATTCACTCATTTGCAAACATGATGGGCAGTGGCTGTTTTCTGCTGTTCTTTTTAAAGTTAACTCTAAATTACTTGTTTGAACTATTTATTTCTGAAAGGAATGTTGATCAAGCTGCCGTTCCCTGCTAAAGATCCTGAGGGAAGTCAGTGGGGGGAGGAAAGAAGAGTTAATTAACCTCTACCGGCTAGACAGTAACTGCCGACTTGAAGCAGAAGGTCTTCTTTCTTTTGAGGCTTGACAGTGCCAGGAGAGGCGCCGTGGTGTAGGGCTCTGGTTGCCTTTCAGAGGAAGTCCACACTACAGCATTGACATGGTGTCGTGGAAAAGTGGAACTATGGCCCAGGAACTCTGGCTATCTAAGTGTCTTCAGAAGAATATTGGAGTCATCCTAAAGAGACTTCCCTTTCTGGAAATGAGGTGACTTGGCTACTCTTAAAACTGGATTTGAAGTAACTGTAAACCCTAAATCTTCATTTTGATCCCAAATCTGGTTGTATATTAACCTCAGATATGTAAGGGCTGGCCTGAGCTGTTGATTTCAAAGATACTATTCAATTTAAAGCTGTTTTTTCTCAACGTTTTTTTTTTTTCCTTTATATGAAGTTGAAATTAAGTTTTATACTCATTAGCATTTACATCTCCCCATTCCACCCCTACGGATTTCTGTGCGAGAAAATTTAGTACTTGGTTCAGAGGTTGCCAGTTCTACAGTAAACTATTTTGCATATGAAAGTTTGTATTTAACTGTTTTGTTCATTAAAAACCTTACAGTGGTTATGCATATTTAATTTCAGGAAATTTAGAGTTGGTCAGAACATATTTTGCAAAATCTAGTGCCTAGTGTTGCTTTTTTGATGTAATAAAAGGTTGTCTGGCAGAACCTGGAA EMBV3_21159 GAGTTACAGGAGACCACCAGGACCTCCCAGTTGCCCAAAATGTGATCAGAATGGAATACC Variant GeneID:511280|NMI:NM_001035098:85_cdna 246^408 1 EMBV3_17060 GeneID:511280 2 GENE NMI MGC126958 N-myc (and STAT) interactor EMBV3_27026 CGTTCTGATGCGAGGAGGGGATGGCACCAGCATGTGGGCTGATCTCTGCAAAAACAACCA Gene GeneID:614045|C1QL3:XM_002692101:314_cdna UTR3_Alt 2 NULL GeneID:614045 13 GENE C1QL3 NULL complement component 1, q subcomponent-like 3 EMBV3_31928 CACGTTTGTAAGTGACAGAATGGTGAGATAGCTTCTGTGATTGGAGAGCTGAGCCGAACC Gene GeneID:533141|TBK1:XM_002687546:543_cdna Constitutive 0 NULL GeneID:533141 5 GENE TBK1 NULL TANK-binding kinase 1 EMBV3_33653 GTAACCAACCCAAAGAAAGCGCCAAAAGTACTGATAACTCAGGCAAAGTGCAGAAGACTG Gene GeneID:541218|POLK:NM_001102258:45_cdna UTR3_Alt 2 NULL GeneID:541218 10 GENE POLK MGC152198 polymerase (DNA directed) kappa EMBV3_02555 TCATTGATCACTTTCTGTGTGATGTGGACCCTCTGATGGCATTGTCCTGTGCCAGCTCAC Gene GeneID:783780|LOC783780:XM_002690663:227_cdna Constitutive 0 NULL GeneID:783780 10 GENE LOC783780 NULL similar to Olfactory receptor 11H7 (Olfactory receptor OR14-32) EMBV3_01768 AGATCAGGCGTGAGTTGCAGAGTGCCGTCCCCCGAGATGTAGAAGATGTTCCCGTCACCA Gene GeneID:514128|BYSL:NM_001014924:279_cdna Constitutive 0 NULL GeneID:514128 23 GENE BYSL NULL bystin-like EMBV3_04494 TCTGCCACATTGGTTCTTTGGCCTCAGTGTACCATAAGCCGCCCAATGCTTTTGTGGAAG Gene GeneID:100336833|LOC100336833:XM_002695651:101_cdna Constitutive 0 NULL GeneID:100336833 19 GENE LOC100336833 NULL AP-2 complex subunit beta-like EMBV3_28452 GGAAGAGGCGTGGAATTAGTGTATACCATGCTTCCTAAGTGCTTCCTAGGCTTTGTGTGG Gene BVT0102_250095 - 0 NULL GK000018.2:60696511-60703685 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00084608 TCONS_00084615 TCONS_00087410 3 XLOC_051618 XLOC_051624 XLOC_052468 NonCoding TCONS_00084608 XLOC_051618 NonCoding NonCoding - 18:60596808-60597845 - TSS63348 1037 2 TCONS_00084608_1 50 0.232401157184185 1 0 0.000396764591289866 0.000381460205253014 0.000213735064479197 8.44380178586698e-05 0.00011299478442338 0.000148588344784188 0.000714688341920053 0.000183108848176724 0.000344844622438206 0.000269857546058926 5.15084443546057e-05 0.000148268506335203 3.04359929812518e-05 5.6460542112403e-06 4.49265753772907e-06 0.00245536096888424 9.28295388709854e-05 0.00300104718139838 0.000684322036288657 0.000554992638226909 0.00031747214964662 0.000715176640869999 0.000908172252763025 0.00128198944451773 0.000372043770967225 0.000507360992544958 0.000141126858402303 0.000360937705740781 0.000199455338804083 0.000343546032620129 XR_232910.1 LOC618289 PREDICTED: Bos taurus zinc finger protein 208-like (LOC618289), 0.0 1049 99.83 0.562198649951784 0 noncoding 1 1 1 1 0.0110498197183928 0.966432984803546 0.0201686951818657 0.774270220155667 GGGGCTTGTAAAGTAGACCCTGTGGTTCAGCAAGACTGTTGATCTCAAGGAAGGTGGTCATATAGAGAGCAGGTGCTCACAGGACTGGCTTTTGAGTTCAAGAAACCACAGGCTGCCTGCTGCCCAGACAGATGCTGAGGCAGCAACAGCATGGACCGGTTTAGGGAAATTGTCAACAATACTCGTTTTTTGATATAAGGATATGAGATTTGTGACTTTTACAGCTTACCAAACAAAGCCTAGGAAGCACTTAGGAAGCATGGTATACACTAATTCCACGCCTCTTCCAGGAAGACTTTCTAATACGTTTCTGGGTTATCACAGAAGCTGTCTTCATTTCAACATTGTCAAGTAATAATCATGACTTGTGTGTTGCTATTGTAAAGATACATCAATATTGCAGTGAACTCTCATTGTGTTTTTCTTACAAATCAACGATATTACTATTGAAACTTTAGAACCAACTTCTATCTTACTTTAATACATGGAAAGATTAAATGATCACTTACATAATGGCAACTTCCAGATATTTAACATCAATGCTAAAAACCTCCATTTAGATGGTCATTTTCCATTTTACATTATGGTATCCTTCATCTTCTAATGGAGGATAGATAGAAATGGTTGCAACACAATATAAAAAGGCTAATCTTTAATAAACCATAAAAAATCTACGTTTCCAAACACAGTAGAAAGCTTAGTATGGATTGAGTGTTGAATTACATTCACGTCAAAGAATCTCAAATCATGTCATTATAAACGAGCATACAAATAGCAATCCACTCGAGTACTATTGCCTGGAAAATCCCATAGACACAGGAGCCTGGTAGGCTACAGTCTATGGGGTTTCAAAGTTGGACACGACTGAGTGACTTTACTTTCACTTTCATACATACATTGCTAAGAATTGTAACTTTCTAACCATCAACCTTCATCTCACAATTCATGGTAATACGTCCATTTCCTGTGTATTTTAACTATGGAGTACTACCTACAGTCATTGTACTTCATAGAAACTTCTGAAAACAAGATTGATG TCONS_00087411 r 3' 64 TCONS_00087411 r 3' 1100 EMBV3_17933 AACAAATCAAAGTGAAAGCCATGTAATAGCCATCCCAGAGAGCTAAGTCCTAACGCCACC Gene GeneID:540167|CCDC47:NM_001035428:278_cdna Constitutive 0 NULL GeneID:540167 19 GENE CCDC47 MGC128135 coiled-coil domain containing 47 EMBV3_42984 CCTGCTGGTGTCTGGGTCATATCTCTGGGGCATGTTTGGTCCATTGGTACTCCTTTGCTA Gene GeneID:513575|LOC513575:XM_002683829:6_cdna Constitutive 0 NULL GeneID:513575 28 GENE LOC513575 NULL similar to olfactory receptor, family 5, subfamily D, member 14 EMBV3_15782 ACAGCTTCTAGAAACCATGCCTTAGGTTTTCTTCCATTGGGAAGCGTCGCTGGCAGGGAA Gene GeneID:518967|C1H21ORF2:NM_001075781:38_cdna UTR3_Alt 5 NULL GeneID:518967 1 GENE C1H21ORF2 MGC139666 chromosome 21 open reading frame 2 ortholog EMBV3_20685 ACATCTGCTTCTGCCTCACAGTGGGAGTTTATATTTTGGGCATCACTGGATCCACAGTCC Gene GeneID:781277|LOC781277:XM_002699162:43_cdna Constitutive 0 NULL GeneID:781277 29 GENE LOC781277 NULL similar to Olfactory receptor 8G2 (Olfactory receptor OR11-297) (Olfactory receptor TPCR120) EMBV3_19311 GCACTCTTGATTATCACCTGACTTTCTCTGTTTTTCCCACCCCTAACCCCAACAAATGGG Gene GeneID:614149|NUDT5:NM_001076314:14_cdna Constitutive 4 NULL GeneID:614149 13 GENE NUDT5 MGC140268 nudix (nucleoside diphosphate linked moiety X)-type motif 5 EMBV3_36312 GGCTACGAGAGCAGCGCCGAGCGCTGGAGCCCCAATGACGAGAGCGGCGCCAACGTGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29724 CAAATGCCTGAACATCTGCTCCCTGGTCCTGGGCATCCTTCTGACTGTCGTCCTCATCGT Gene GeneID:777594|LOC777594:NM_001078141:37_cdna Constitutive 0 NULL GeneID:777594 29 GENE LOC777594 MGC128260 hypothetical protein LOC777594 EMBV3_01777 AGCATATTCACCTGTCACCCAGCCACCATTGGGCATTGGACAAGTTGTTACTGACTATGT Variant GeneID:281481|SDHD:NM_174179:17_cdna 174^318 1 EMBV3_05557 GeneID:281481 15 GENE SDHD NULL succinate dehydrogenase complex, subunit D, integral membrane protein EMBV3_10423 AGTGGCGACTCAACCAGCTCAACAACGCAGCCACCGCCTTGATCTTTATCACTGTCATGA Gene GeneID:509556|NINJ2:NM_001101914:13_cdna Constitutive 0 NULL GeneID:509556 5 GENE NINJ2 MGC148738 ninjurin 2 EMBV3_24294 CTACCCACTCCTTGTTGGAGGCAAAGTCGTGCTTAAGAAAAAACAAATAGCTCTCCCCCC Gene GeneID:534778|RNLS:XM_002698371:161_cdna Constitutive 1 NULL GeneID:534778 26 GENE RNLS NULL renalase, FAD-dependent amine oxidase EMBV3_03248 TGTGGTATTCGACTGCAAGTTCATCGAGACGTCAGCCACGCTGCAGCACAACGTAGCGGA Gene GeneID:508364|REM1:NM_001046001:949_cdna Constitutive 0 NULL GeneID:508364 13 GENE REM1 MGC137610 RAS (RAD and GEM)-like GTP-binding 1 EMBV3_01195 GTCAGGAGGATCATGAGATAAATACACAGGTACACATACCAGGGCCCCAAATATCTCTGG Gene BVV0101_002349 + 1 EMBV3_30712 GK000001.2:148347074-148566629 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00301 GCTGAACAAAGACTGCAAATGCCTCTGGAAGTGGGGTGGCTGTGGGGCAGCTCATTAATA Gene BVV0102_212454 + 0 NULL GK000002.2:54593804-54816172 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08355 GAGACAGCACGTGACCTAGTGAGCAGTCTCGCTCCTTCCTGGGAGTGGTGGTCCAGGATA Gene BVT0102_062344 + 0 NULL GK000022.2:11758688-11766154 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126055 TCONS_00126056 TCONS_00126046 TCONS_00126053 TCONS_00126049 TCONS_00126047 TCONS_00126050 TCONS_00126052 1 XLOC_077360 Coding TCONS_00126055 XLOC_077360 Coding Coding OXSR1 22:11720309-11761341 j TSS94651 3809 1 TCONS_00126055_1 367 14 0.907508956642539 0.00067869111162042 0.000288835662305104 0.00213197162467307 5.6840703604615e-19 0.00145426405828166 4.1644884654131e-07 0.000227099749985594 1.25691331234756e-10 0.00124716854195133 0.000873469644121204 0.000452326896959865 0.000125674216145989 4.76331075031808e-13 1.83300439081303e-11 3.17554119005436e-15 0.0010254570511669 0.00872650400525836 0.00202225214483078 2.25908486244719e-08 0.000442526598103487 0.000487705247106915 0.00466139547410186 0.000891969027140522 0.00273353090590438 0.00219179540469536 0.00195339075243596 0.000405356296213465 0.000124554388113481 0.000276464753316299 0.000251396810736989 XM_005222471.1 OXSR1 PREDICTED: Bos taurus oxidative-stress responsive 1 (OXSR1), 0.0 6518 100.00 0.94854292465214 NM_005109.2 OXSR1 Homo sapiens oxidative stress responsive 1 (OXSR1), mRNA. 0.0 4156 84.98 0.97794696770806 TCONS_00126055_1 sp|O95747|OXSR1_HUMAN OXSR1_HUMAN Serine/threonine-protein kinase OSR1; 0.0 701 96.71 0.991825613079019 3 coding 1 1 1 1 -0.0185789127115602 0.899209015648474 -7.72287385447101e-05 0.99891831148029 AACCTTGAATTATTTCTTCAGCTTTAGAAGAAAATTTAGGCACACATCTTCATGTCCTCAGACTTTGGAGTTAGTGCTTTTTTAGCAACTGGTGGTGACATTACTCGGAATAAAGTGAGAAAAACCTTTGTTGGAACACCTTGCTGGATGGCGCCTGAAGTTATGGAACAGGTTCGTGGTTATGATTTTAAAGCTGACATCTGGAGTTTTGGGATCACAGCCATTGAACTGGCCACGGGGGCAGCTCCTTACCATAAGTACCCACCGATGAAGGTTTTAATGCTGACACTGCAGAATGATCCTCCTTCTTTGGAAACTGGTGTTCAAGATAAAGAAATGCTGAAAAAATATGGAAAATCATTTAGAAAAATGATTTCATTGTGCCTTCAAAAAGATCCAGAAAAAAGACCAACAGCAGCAGAACTGCTAAGGCACAAGTTTTTCCAAAAAGCCAAGAATAAAGAATTTCTTCAAGAAAAAATATTGCAGAGAGCACCAACCATTTCTGAAAGAGCTAAAAAGGTTCGGAGAGTACCAGGCTCTAGTGGCCGTCTTCACAAGACAGAAGATGGTGGCTGGGAGTGGAGTGATGATGAATTTGATGAAGAAAGTGAGGAAGGAAAAGCAGCAATTTCACAACTCAGGTCTCCCAGAGTGAAAGAATCATTAACAAATTCTGAGCTATTTTCCACAACTGATCCTGTGGGTACTTTACTCCAAGTTCCAGAACAGATTTCTGCTCATCTACCTCAGCCAGCAGGGCCGACGCCTGCACAACCCACTCAAGTCTCCCTGCCACCCACTGCAGAGCCAGCAATAGCAGCTCAGGCTCTGTCTTCAGGAGCAGGTTCACAAGAAACCAAGATCCCAATCAGTCTAGTACTAAGATTACGGAATTCAAAAAAAGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGTCTCTCAGGAACTCATTTCTGCCGGCCTCGTTGATGGAAGGGATTTAGTCATAGTGGCAGCTAATTTGCAGAAGATTGTGGAAGAACCCCAGTCAAATCGATCCGTCACCTTCAAACTGGCGTCTGGTGTCGAAGGCTCAGATATTCCTGATGATGGTAAACTAATAGGATTTGCCCAGCTCAGCATCAGCTAAAACACAGCCCTGGAAGAGGCAGCCGAAGGAGATTCCACACATGCGTGTCTCTGTTGCTTCTGTTGGCCTAAACCCACTACTGCCAAAGAACCCAGCAACAAACCTCCCAGCTAGGAGCTTTAGAGGTCTTTCTTTTATGTTTTTCCTGCCATCATCCCTGCTTTTTCCCACAGGGAAAGAAAAGTTGGATCACCAGTGGCCAGCATCCCTTTTAAAGAGTTCCGTTAGTAAACTTACTGCACGCATCCCCTGTCTTCCTCCATCTAAGAAGTGGCCCGGGTGCCTCAAGGCCCAGGAGGGAGGTCTATCAGCTCATCTTGCCTTACTCCAGTGATGGCGCTGGGGGGAAAGTAGCAGCTCTATTGGGCTTCCTCATCCTGCTTGTTCTCCCACACCGGACGGGATGTGGGCATCTTGGGATATCTCTTTACCACTGAAGTAGCAATTAAAAGTTGATTGTTCAGCTGGAGCCCAGAGAATTTAGTTTAGTGATTTTTTTTTTTTTTTTTATCTGATATGAATTCTAGCAACCTTCGTTAGGAAAAAGCACAGCCTCAGAAGGAGGCATCCTAAACTGTGTTTTGTTTTGTTGATGATGTTTCTAAGCGTTTTGCTGAAGCTGCTCTCAGGCACCCCTCTTCATTACTTGCTCCAGAAAGGGTTGCTCGCCTTAACTTCAGCTGGTGCAAAACATCTGACTGTAATCGAACTTCAGCCATCGGACCCTTCAAAGCGGAACTTCGGACTGTTTTTAGGGAAAAAAATCACGTAACGGCTTATAAACGAGAGTTACCCCAGCAGTGGTGTTTTGAACAGGAAAAAATCATAACTCATATCAGTGTGGAAGTATTTATTTCAGCTCTTAAACAACTGAAGAAAAACTGCTCCTTGATCCTCCCATGAAAATCAATTTGCCTGGCCTCCGAGTCATGAGGAAATGCAAGGCTGAGATTTCTACAGCAATAAAGGAGAGTTGCCCTAGGCCAAAGAGGCCTGCCTTCTGCCCCCTCTCCTGCACTGACCCTTAGGAGGGGGTCCACACTTCCGTGTGCTGAACCTGACCCAAGATGGAACGTGAAACCACATGTGCCGTGACTTTTAGGATTTATGCGTAGACAGTGTTCATTTGATTTTCTACAGAAATAATATAAATTATTCTTTAAGTTTAAAAAAGAGCACTCATAATGCAATATGTGAATCACCAGTGGGGTTGATTTTTTTTTTTTTTCCTATTGTTTCACAGTCAGCCTTTATCTAACTGCAGATTAGCCCTAACAAGTTTTACAAATGAAAGAGATCCTCAATCTGGCCTTAAAACAACACAAAAAAGATGGGCTTTGGCCCCATGGAAAGGGGAGAGCTGCCTCTTACAGAATCAGTCGATCCCTTTCCATCTTCGTTGGTCTGTGAATAACAAGATTGCTTTACCTAGTTTCTTCTTGGAGCACCTCTGAAAGCTTTCCCCACAACTGACTTGTTACAGTTTTAATTTCATTCTGAGTTCATAGTTTTAACCTTGGGCTTTCTTCACCAGCCCTGGATACAAAGGCATGTTGGGAAAGGGGTGGGTGTTGGAGAGGAAGGGAGGGGATGGTTTGGGATGAGAGGGTTGGGAGGAAAGTAGATCAGAGGATCAGATGCCAGAGTCCTGGCAGGATTGGTGAAAGGAGGGAGCCTGTTGAGCCTGGAGACGGAAGATTGATCAGCTTGATGGACAGATATTTAGCTTTTCTTTTTTCTTTTCTTAGAGTTGAGGGGGAAAGGACAGGAAGGTAGGAATAAGTTTATGGAAAAGATGTAGTGTCCCATTTGGCACAAGACTAGGGGCTTACCTTAGAGTCTGTATTTTCATTTCAAGTAAGCCCTCATAGTCTGCTTATTTCTGAATCCAGAGGGTAGTGGCATCACTCTATTATAGGTTTCTTTTGGAGGTGATCAAAAAAGCCCAGGCTGGAAGTAAGCAGCAGCCCATCTCCTTGTTCAGTTTCTCCTGCTGGCCATTACCTGTGAGCTGCAGTGGGACAGGCATGACCTTTGAACTGAAGTGGGCTGGGGCTTTCTCTTTCTTTTCCATTCATCTTTTGCCCTGCTGGGAATTAGGAGCCAGACACCAAGCCCCAGGACAGTGTTACTTCTTCTGCATGATGTATGGTGGACTCCCTTTGCTGGCATGTGCAGTGATGCTGAAAAAAAGTGAGTGAACAGAAACTTCGCAGGTGAGACAGCACGTGACCTAGTGAGCAGTCTCGCTCCTTCCTGGGAGTGGTGGTCCAGGATACACCTCTCTCCCTACATCCCTAGGATCTCCTGGGTCCTAGGGTAGGGACTAATTTAGCACGAGGTAACATGTGCCAATGCTATTTGTAAAACGTTACGGTCTTTCTAAATGATTCATGGATTTGTTTGGGATATTTTGCTTAAGTTGTGAACCAAATCCTAGAGCCAGCTGACACTCTTAATAATCTGGAGAACAGAATAATGGTGTATCAATAAATGGAGGTTCCTCCTTATGACGTATGCTAGATTATGGAAGATGTAAAATATTTGACTTCCCCTCCCCTTTTTTTTTTTTGACTTTGTACTTTGCTGCATGTTTCATTAATTTTTAATCAATAAAGAATAAATTGTCTGTGGTGGTGTAAGGATGCTTCACT EMBV3_25414 GTGAAGGAAAACCCAAGCCTGCAACTTCAGCATTAGCTAAGAGCTTAGAAGATGCCCTGA Variant GeneID:508853|IMMT:NM_001046015:62_cdna 572^667 2 EMBV3_11055 GeneID:508853 11 GENE IMMT MGC133830 inner membrane protein, mitochondrial (mitofilin) EMBV3_39537 TCCCTTCTGTGTTCATGTCTGCAGCCGAGGCTGTAGGAAGGATGGGCTACAGGAGCAGCT Variant GeneID:508550|KRTCAP3:NM_001035062:84_cdna 566^620 2 EMBV3_36776 GeneID:508550 11 GENE KRTCAP3 MGC128201 keratinocyte associated protein 3 EMBV3_11115 TAACTCAATGGAAACACCAAGGCCCCACAGTGAAGGCAAGCTGAGCATCTGTATCTCCAG Gene GeneID:613433|SYNPR:NM_001046506:8_cdna UTR3_Alt 3 NULL GeneID:613433 22 GENE SYNPR MGC139775 synaptoporin EMBV3_41799 CAGTCTCCAAACCAGAAAGTCAACTAAGTGTATTTTTGAAGATCCTCGTGTACTACCGTG Variant GeneID:540154|TRIM59:NM_001080310:155_cdna 136^182 1 EMBV3_08386 GeneID:540154 1 GENE TRIM59 MGC137058 tripartite motif-containing 59 EMBV3_38439 CAGTGGTCCTTTTGAGCCTGACCTTTACAAGTCTGAGATGGAGGTCCAGGATGCAGAGCT Gene GeneID:540272|PA2G4:NM_001034699:31_cdna Constitutive 1 NULL GeneID:540272 5 GENE PA2G4 MGC128827 proliferation-associated 2G4, 38kDa EMBV3_06828 ATATCAGTCACGGATGAACATGGAATTGAGGGGGAGCTTGTATATGTGAACTACGCTCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38046 GAAACCAGTAGGGTGAGGATACAGGTGACTGAGACTGTGAAAGAGGAGGGAATATAGACC Gene BVT0102_048241 + 0 NULL GK000014.2:16783576-16971032 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31433 AGCAGTGGGTGGGGGCCACCTGCCAGCTGGACGTCGACGACTGTCGGGGCCAGTGTCAGC Variant GeneID:517405|JAG2:XM_002696794:521_cdna 845^958 2 EMBV3_30495 GeneID:517405 21 GENE JAG2 NULL jagged 2 EMBV3_32533 ACACCACGTATCTGATGGAGAAGATGAGAGAGCAGTTTGGTTGGGTAACAGAGCTGGCCA Gene GeneID:516801|CLUL1:NM_001034520:116_cdna UTR3_Alt 2 NULL GeneID:516801 24 GENE CLUL1 NULL clusterin-like 1 (retinal) EMBV3_34480 TGCCGTTCCCTGCTAAAGATCCTGAGGGAAGTCAGTGGGGGGAGGAAAGAAGAGTTAATT Gene GeneID:539639|SENP2:XM_002684846:203_cdna Constitutive 0 NULL GeneID:539639 1 GENE SENP2 MGC142409 SUMO1/sentrin/SMT3 specific peptidase 2 EMBV3_11701 GTGAGAGGGAGGAGTCGCCAATAGAAATAACCAAGTATGGCCACATTCACAGAGTGACCG Gene GeneID:523257|VSIG10:XM_002694505:396_cdna Constitutive 0 NULL GeneID:523257 17 GENE VSIG10 NULL V-set and immunoglobulin domain containing 10 EMBV3_38061 TAATGTGGTGCAGTTCCACTAATAGTATAGTTTGATAACTTGTTTAGTAAGTTACTGGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38513 AGAAGCTGTGTCTGGGAAGCTCCAAGCAAGGTTACGTTCCGGGGAACCCCGTCTACAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41564 GCACTGGGATTCTTCACTCTGCCCCTTTCTTTAGGGCAAATAACACAGCAGAACCACGTG Gene GeneID:515742|TMEM150A:XM_002691366:221_cdna Constitutive 7 NULL GeneID:515742 11 GENE TMEM150A TMEM150 transmembrane protein 150A EMBV3_01802 ACTGAGGATCAAGCCATGGAAGATATTAAGGAACAGCTTCTCAGACTGAAAAAATACAAA Variant GeneID:282208|CSN1S1:NM_181029:14_cdna 320^430 5 EMBV3_41259 GeneID:282208 6 GENE CSN1S1 CSN1 MGC133694 casein alpha s1 EMBV3_38830 TTGCATCTCCTGCCTTGCAGACGGTGTCTTTACCAACCGAGCCACCAGTTACAGCCGCCA Gene BVT0102_146639 + 0 NULL GK000024.2:25836736-25854674 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00138690 TCONS_00138691 TCONS_00138689 TCONS_00138697 TCONS_00138698 TCONS_00138699 TCONS_00138696 TCONS_00138687 TCONS_00138695 TCONS_00138688 1 XLOC_084709 Coding TCONS_00138697 XLOC_084709 Coding Coding B4GALT6 24:25779792-25839579 j TSS103880 4786 1 TCONS_00138697_2 338 0.0405348934391977 9 0.920098350784465 2.57793535687094e-08 0.00185182514842411 8.0779684590072e-12 2.78552437983988e-10 5.17078020752551e-06 2.5704513538732e-10 0.000135809647258475 0.000196713504417712 0.000987734330839599 6.33031869968143e-05 3.70253111170172e-05 4.02761785306711e-40 0.000132801555126866 6.20800437200141e-05 0.00038764358413875 0.00249242318698066 0.000904869058997138 4.47201628381706e-10 0.00164447003122398 0.00180158856177897 0.000668373259590439 0.00147093640933215 0.000847065857111302 0.00249006034350068 0.00163999688679765 7.97198648558825e-08 2.0476373582206e-09 0.000633433310829619 0.000154233078360867 0.000317624517051693 NM_001192596.1 B4GALT6 Bos taurus UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 (B4GALT6), mRNA. 0.0 3386 100.00 0.391976598412035 NM_004775.3 B4GALT6 Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 (B4GALT6), mRNA. 0.0 2828 87.63 0.479523610530715 TCONS_00138697_2 sp|Q9UBX8|B4GT6_HUMAN B4GT6_HUMAN Beta-1,4-galactosyltransferase 6; 0.0 703 98.52 0.997041420118343 3 coding 0 0 1 0 0.110958623691337 0.735526941298943 -0.102073044006002 0.23565226527604 TCGCAGAGCACCAGGTTGAGCTCCCTGTCACACAGCAACTTTCCACTCCTGTCTGTTTTACGTGTGCCAACACATATCTCTTTATGGTACAAGCTCGAGGAATAATGTTAAGAGAAAATGTGAAGACAATAGGACATATGATCAGGCTGTACACAAATAAAAACACCACGCTCAACGGCACAGATTATCCTGAAGGCAATAATTCAAGTGATTATCTTGTTCAAACAACAACATATCTTCCGGAAAACTTCACATATTCACCATACCTCCCCTGCCCAGAAAAACTGCCTTACATGCGGGGATTCCTCAATGTCAATGTAAGTGAAGTCAGTTTTGATGAAATTCATCAGCTCTTCTCCAAGGATTTAGATATTGAGCCGGGAGGTCACTGGAGGCCTAAAGACTGTAAAGCCAGGTGGAAGGTGGCAGTCCTCATTCCTTTCCGCAATCGCCACGAACATCTTCCAATTTTTTTCTTGCATCTGATCCCGATGCTCCAAAAACAGCGGCTGGAATTTGCCTTTTATGTCATTGAACAGACTGGCACACAGCCTTTTAACCGAGCAATGCTCTTCAACGTGGGCTTCAAAGAGGCCATGAAAGACAGCGTCTGGGACTGTGTCATCTTCCACGATGTGGATCATCTACCTGAAAATGACCGAAACTATTATGGATGTGGAGAAATGCCACGTCACTTTGCAGCCAAGCTGGATAAATACATGTATATTCTTCCTTATAAAGAATTTTTTGGTGGTGTAAGTGGACTGACAGTGGAACAGTTCAGAAAGATCAATGGTTTTCCTAACGCCTTCTGGGGCTGGGGAGGGGAAGACGATGACCTTTGGAATAGGGTTCACTATGCTGGATATAATGTAACAAGACCAGAGGGGGACCTGGGAAAATACAAGTCTATTCCTCATCACCATCGAGGTGAAGTCCAGTTCTTAGGACGGTATAAATTACTCAGATACTCAAAAGAGCGCCAGTACATCGATGGGTTGAACAATTTAGTATACACGCCAAAAGTACTGGTTGATAGGTTGTATACAAATATATCTGTAAACCTCATGCCAGAGTTAGCTCCAATCGAAGACTATTAAAGGAAGTAGCTCTCGTGGCAAGACCGCAATGCTGGATCGGAAACTGGGAGTGCGCCCCCTAGCGGAGGTCAGTGAATGGATGCGTCACAGTGCTCTGGGTGGTGAGAAGAGCCTGCGTTCTCAGTGTTTATTTGTGGGATTGTACACAGTCAGCCTTCTTCCACCCACCCATCTTTTACCGAGACACACCCCCTGGCGAGCACTGCAGAGACCAGATGCAGTTAAGTCTGGCAGTTACAGGAGCTCCCTACGAAGAGAAAATTTTTATACTAAAATCTATAATTTAATTCAAGAGAATGCTTTATTTCCATTTAAACATATTTTGTACATATGTGGTGTAAATTAATGTGTTCAAATTGTTGAAAAATAAGATGTGTTGCAGTTTTGCATGTAACGGGTGATGCCTTTATGGGACTTTTATAAACCTTTTTTATTTGCATGGAATAAAACCCTGTAAATTTATGTCACTAAACAAAGGTTAACCTTGTGTGAAATGAAGGAACTGTCAATAATTGACAACCAACTAATAAATACACTGTTATACTAGTTTTGAGCTTTAGACCTTCAGCTTTTTGTGGAAGAAGTCACAGCTTCTGTAGGGTTTTTAAGGGTAAGAAGAGAGGACTTAAATAGCTTTTCTTCCTACCAGAATTACCTTTTTTTTTCCTTGCTTGCAATCTCATCAGGTTTTGCTAAATCACAACCATATTATTTATGCATATTGCATGAGTATTACTAAGAAAATCTTAAAAGTTGTGATGTGACGCGATATAAAGGAGCTCTTTGTTAACCGTCTCTCATGTACCTCTGGTGTAAGTGTCAGGGATTTTGTGCCTCAAAAAATGTTCCCAAGGTCGCGTGTGGTTGTACACTGTACTTTTTAAATTCACAGTGAATAGCACTTTTATTATTTCCAGTTCAGAAGAGCCAAAAAAAACTTTCATTTAAGAAAAAAGCAAAACAATTTTTTAAAAGATTGAGTTATGGAAAACCCAGTAGTACTTAAAACATACAAATGAATTATACTATTAGATAAAAAATTAAATGTTCTATTTTTATGAAGATAAATGCTTAGTAGATAAAAGCAGATTTTAAGTTTAATTATCAGACTCATAGAACTTCAAGTTTGGAAGGGACCCTTTTTAATGTTGGCTGGTTTCATTCAAACTGCGTGTATTTTTTTCACTTATAAGTTATTACATCTCTGGTGTTAAAATTTCCTCACTAAAACATAAATTAATAGAATTATATTAAGATACATTACCAATTATTTAAATGCATTGGCTTTATTAAGACACCTCTCTAAAAACAGGTCTCTCTACCTGACATCAATTACTTAATCTTGAATTTGGATGGCATTTTCATAACAAAACCAAACAGTATCCTTACTTTGAAAATTATCAATTATGATTGACCAAAGATTCTTTAAAATGTCTTAAGATATTTTCATAAATTTAAAACAAAAAATTATATATCTATGAAACAAACCTTCAATATCAAGGAACAAAATGGATTATTCACCTGACACAGATATAGTTATTTATCTCTTAGGTTGTAAGTTTAATTTTTAAATTGTCATTTTCTGTGGCAAATATTGATAACACAAATGACTGCAAACAAAACCATAAAATAATTGAAATTCTTACACTTTGAGAAAACTGATAGTTCTCTGTTAAACAAATTTTCTACATTTATTTCTTAGAAATATTTCCAAAATATTTGTTTTTCATTTTTTGATGAAAAGTCAAACCTTCTGGAAAGCAAGATATTTGTTCTTAAATTGTGTATCTATCTCTCAAAGCCCATGTAGTTTTTTAATTTGATGAAAGGAAAGAAAGTAGATTGAAAAAGTTAACATTTGTTGATCACTAACAAGATTGTAGGGGCATAGGAGCATAATTAACCCAATAATACTTAAATATTTTAGTCATGGGGGAAATTGGGGCTGTTTCTGAGTCTTATTAGGAGAACATATTTTTCTCTTTAATATGGAGCGGCCCACATTTTGGAATCTTCTCATTTTGATACACATTTTTATAGTTTCAAGAGAATTCCCTTCAACTAGATTTGCCTTATTTTCTTGGATTAAGTCTACTAGTAATTTTGTTTTAAGTGAGGGCCATGACTATTTTGCTTTTTTTAGTTTTGGATACAGTGTGGCATCCTGTGAAAACCATCTCATTAGTTTGCTTTTTATCCTTTGTTTTGCTTTTTAAGTGCAGACCTCAAATTGATTTTTGCATATAAGTAGTAACTTTTATGTTTGCATATATGTGATAGAGCTTTGCCAATTACCTGTATAAAAAGAACTCTGTCCCCTGGTGGTGGTGGTGGTTTAGGACCTAAGTTGTGTCCAACTGTTTGCAACCCCATGAACTGTAGCCCTTCAGGCTCCTCTGTCCATGGGATTTCCAGGCAGGAATACTGGAATAGGTTGCCATTTTCTTCCCCAGGGGATCTTCCCAACCCAGGGATTGAACCCTGGTCTCTTGCATCTCCTGCCTTGCAGACGGTGTCTTTACCAACCGAGCCACCAGTTACAGCCGCCAGCCTGTAACTCTGTCCCATAAAAATTAACAAATACATTACAAATGCAGACTGTCTTTATAGCTCAGTGGCTTTGTTAGCGTGCATGTGTTGATTACCTACTCGATTAGGTGCAGTGCCAGGTATGTCAAAGAAAACATTTCCGTTCTAAACAAATCAAGTCAAGCAGATTAAAACCTTTCTAAAATTATGAAAACGTCTTCTGTTAACTTATACATTGTATTTTTTAGTCTCAAAGGCAAGAAATGTATATAGATAGACATAATTCCGAGCTCCCTATAGCACTGCTGGGAAAGTTATACAGTGCCTTTCGACTAGAGAAAGTAGGAATGATTAATGGGCCTGTTTGTAGAAAAGAAAATGAAAAAGTGTACACATTTGCTGTAACATTATGTCTCAATTCTCATTCAGATTGTCATTTAAGTCTTTGCCAAAACTGGGGTTTAATGAATATTTTTTCAGTCTAAATATAAATTTCTGTTTGTAATTTGTGAAAAGGTGTTCCATAAAAATAAACCCTTATTTGCAATATTATGTAAATACAAAATTATGTGTTAAAACTTGCTTATTCTCCTTTCCTAGCCAAGGTATTGATATCCATTTTAAAACAAAATGGAAAAATACCAGTTCAATATTCTCCTTCATTTTGGAGGTTCTGTACAAGTCAAAGCAGATTGTGTGTCATTTGATTTGGCCTTTGTTTGTCTCGGTTATATTTCTTTGTGTACTTTTCAGACAAATACTGGTACTCTAGATGTATTATCTTGTATTTGCAAATATGCCAATGAGAGAACTGAAATGGTCATAGTGTTTATCAGAAAAAGGAAGTGTACTTAAGATTATTTTATTTATTAAGATCTAAAAGGCTTCTATATAAATGCACTGAAATAAATGCTAGTAATTTCTTGTACTCTCATTTTTTTTTTTTTTTTTTGCTTCTCATGGAAATGTTTGTACTTTTTTATCATTGTCTTTTATGAAATATAATGTTCTAAAGACCTTGTGTGATGATGTGATTATTTTCTCAGGACCTGTTTTTGGGGTTGTCTGGGGTTTTGTTGTGTTTGTGTTCCTGATTTTCAGGTGGACTATTGCTGAATGCTGTGGTTGTACTAGAATTTACACTGTAAGCATGAGGT EMBV3_40172 AAGGACGGCGGGCGCCTCTACCTGGACCCCGATACACCCTCCCCCGAGTGGTCAAGTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05087 GATAGTTCTGTCTCATGTCCTGTCTGTTTCTATTAGCGGAATGACAGCTATGACCTTGCG Gene GeneID:616912|FAM155A:NM_001083776:13_cdna Constitutive 0 NULL GeneID:616912 12 GENE FAM155A MGC151648 transmembrane protein FAM155A EMBV3_25232 GGTGCAGATGGCCCAAGCAGGTCAGCCAGGGAAAATGCCAAGTGGGATAAAAACCAACAT Gene GeneID:507623|MED8:XM_002686438:429_cdna Constitutive 0 NULL GeneID:507623 3 GENE MED8 NULL mediator complex subunit 8 EMBV3_02121 ATGTCCGAGGAGAAGCCCAAGGAGGGAGTGAAGACAGAGAATGACCACATCAACCTGAAG Gene GeneID:784603|SUMO3:XM_002693060:362_cdna Constitutive 0 NULL GeneID:784603 15 GENE SUMO3 NULL SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) EMBV3_20748 AAACCTGAGCCTTTGGACTCCCATTTGGTAGCGTGTCATCCGGTATTGTTGATGCCCAAG Gene BVT0102_263729 + 1 EMBV3_03829 GK000025.2:9359613-9423795 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00148039 1 XLOC_089923 Coding TCONS_00148039 XLOC_089923 Coding Coding - 25:9397779-9400051 - TSS110574 2272 1 TCONS_00148039_4 151 0.503521126760563 1 0 4.79072969557053e-05 0.000157006820813152 0.000233521460046681 8.78417129018746e-05 0.000106479704571083 0.00017104853641854 6.16025518041475e-05 0.000237442870463951 0.000328755168278232 9.05480999718014e-07 1.00756380279776e-06 0 2.52577694220516e-06 9.66193093377909e-06 4.9975119347258e-05 0 0 0 4.31350867112632e-06 0.00121729936347217 3.60760454371954e-05 3.26614878330889e-06 0 0 0.000103683137882558 0.000158150856071497 1.03154024653142e-05 4.22763414512101e-05 0 0 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 0.0 1097 88.77 0.373239436619718 TCONS_00148039_4 sp|Q10126|YSM6_CAEEL YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6; 9e-09 53.5 28.00 0.874172185430464 1 noncoding 0 0 0 0 -0.0154942803924091 0.887099513697003 -0.0208880221143503 0.723459675231725 GCAGAGTACATCATGAGAAATGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGATTGCTGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAGAATCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAATGGAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGATGGAGAAACAGTGTCAGACTTTATTTTTTTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAGTTGAAAGACACTTGCTCCTTGGAAGAAAAGTTATGACCAACCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCAAGAAAGGTCTGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATATGAGTTGGACTATAAAGAAATCTGAGCACCAAAGAACTGATGCTTTTGAACTGTGGCGTTGGAGAAGACTCTGGAAAGTCCCTTGGACTGTAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATTTTTGAAGCTGAAACTCCAATACTTTGGCCATCTGATGTGAAGAGCTAACTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAAGAGAAGGGGATGACATAGGATGAGATGTTGGATGGCATCACCAACTCAATGGGCATGAGTTTGAATAAGCTCCGGGAGTTGGTGATGGACAAGGAGGCCTGGCGTGCTGCAGTGCATGGGATTGCAAAGAGTGGGACACGACTGAGTGACTGAACTGAACTGGGTGTCCAGGAGGAGAATGAGTCCAGGTCCCTCTGAGACATAAAAGAGTCTTCATTCCTTTTATTAAAAACCCAGCACCACTGCCTTCAGGGCCTCTGATGAGCTCTGAGCCTCCATTTCCTCATCATGAGATGGGGCTAATTGCAGCATCTCAGGATGTTTACACAGGGATGAGAATTAGGTAAAATGTGGGTCCTGAATGCTAAAGAACAGAACAAATGTTTCTTTGTGGTGGGATTTATGCCTGATCATGCAGAGCAGCCAGAACAAGAGAAGCGTTAAGGAGAGGTGGTCCTGTGAGGTCTTCATTCTCCCTTGCTGCTGATGGCGAAACCACATGCCTGATGCCACAGGCCCTCATCCACAGAGGTTTCTCTCCTGGAGACAAAAGATGGTCACGTGCTGGCACCTTGATGCCGAGGGCTGATGTGGACCTTTGGGGAGCACACTGTGTGTGAGAGCCCTGCCCTACCTCTTGGGGAGCTGGCAACATGGGATCCATTGGCTCACACGCCCGCTTTGATTCCTTGTTGTAAATGCAGTGTGTTCTGTCCGGGCGGGGGCGGGGGGGATGCGGTGAATGGGAGCATTCCCTGCCCATTGATTTTCTAGGCAATAACAAATACCCCAGCTGCCAGGGGGGCGGGCTGGTAAGTGTGGCTCCTTATCTGTAAGCCTTTGTACATGATCACATACTGGTCCTTTGTGTCATGAGAGGGCTGTAGCCAGGCCCTCTCCTCTAAAAACCCATCCCATCCCAAAGCGTGTTTCATCCAAACCTGCACACCAAGCCAGGCAACAGTTTCCATGCAGACCTGGCACCTTGGGCTGGAGGTGGGAGGTGGGGCAGGTAGAGAGAGGGAAGACGGGGAGGGGCTGAAGTTTCTTTAAAGCCCGAAAATGCAGGTGTGCGAGCCTGGACTAGGCGGTTCAGGAGGAGAAGCCCCAGGCACAGTCCTGGTGTTCAGAAGACATTTTCATTGAATAAGCTGAAGGCAGATTTGTCCTGATCACTCAGGATAAAACCTGAGCCTTTGGACTCCCATTTGGTAGCGTGTCATCCGGTATTGTTGATGCCCAAGGACTAAAGCAGCGTTTCTCTAAATATGGTCCCGGGATCACCAGTGAGGGAATCCGCACTATGTGTGGTGATGGTGGTGGGGATGCTTGTGAGAACATTGATTTCTGGACCTCGGGGAAGACTTACTGAATCAGAACCTCTGGGGAAGGGGCTGAGGAATCTGCATTGTAATTACTTCCCCAGGTGATATTTATGGACGATGACATCTTACATACAAAAATGTATAGATTCTGTTTTTATTTGGCCCCTATTTATAGATTCTATGCAACCATTTTTTAAATTTACTTAATTTTTAATTGAAGGATAATTGCTTTACAATGTTGTGCTGGCTTCTACTTCAC TCONS_00146163 . 3' 23745 TCONS_00146163 . 3' 26016 EMBV3_23853 GAGTCTGTGAAGATTCGGGGAACCGTTGAGTATAAGCTCCCTGGGCTACACACTCCTTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07133 TTCAAAGGTTCTGAAACATGAGGTGGCTAACCCAGTCAAGGGCTTCTTTGAGTCGCCCCC Gene GeneID:510410|RESP18:NM_001077897:71_cdna Constitutive 0 NULL GeneID:510410 2 GENE RESP18 MGC148626 regulated endocrine-specific protein 18 EMBV3_24708 AATGGAGGGATGTGTCTCCGACCTCAGCTCTGTGTGTGTAAACCAGGGACCAAGGGCAAA Gene BVT0102_100454 + 0 NULL GK000011.2:15406501-15676466 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024238 TCONS_00024232 TCONS_00024235 TCONS_00024240 TCONS_00024241 TCONS_00024228 TCONS_00024246 TCONS_00024223 TCONS_00024243 TCONS_00024239 TCONS_00024224 TCONS_00024226 TCONS_00024234 TCONS_00024237 TCONS_00024245 TCONS_00024233 TCONS_00024222 TCONS_00024225 TCONS_00024221 TCONS_00024227 TCONS_00024231 TCONS_00024220 TCONS_00024247 TCONS_00024230 TCONS_00024229 1 XLOC_014461 Coding TCONS_00024231 XLOC_014461 Coding Coding LTBP1 11:15522244-15909977 j TSS17820 4256 1 TCONS_00024231_13 1354 31 0.989103298154395 0.0023918410494435 0.00166147228176692 0.00218844133774288 0.000203643906003231 0.00088411568767895 0.00101304867685134 0.00119311654306922 0.0010726923483397 0.00150377782087653 0.000275773598761592 0.000412422548561833 6.99906371769655e-05 0.000248894510997285 0.000239497336319555 0.000318452361792086 4.10566806880761e-16 6.68267209593948e-62 1.38316436362887e-74 0.00226425483778454 0.00433542558298903 0.000472645982083736 4.33886797330887e-45 9.72950454194282e-05 3.38956701784913e-68 0.00289707995199152 0.00349172431638833 0.0020234482103786 1.30193324959363e-07 2.34911175465246e-06 1.45764082656895e-35 NM_001103091.1 LTBP1 Bos taurus latent transforming growth factor beta binding protein 1 (LTBP1), mRNA. 0.0 4298 100.00 0.55968045112782 NM_000627.3 LTBP1 Homo sapiens latent transforming growth factor beta binding protein 1 (LTBP1), transcript variant 2, mRNA. 0.0 3876 90.31 0.664943609022556 TCONS_00024231_13 sp|Q14766|LTBP1_HUMAN LTBP1_HUMAN Latent-transforming growth factor beta-binding protein 1; 0.0 2551 90.45 0.994830132939439 0 coding 0 0 1 1 0.0393289251305381 0.747973715563507 0.0113329216175951 0.806080584180497 AGGCTCCAAGACATGCCTCCTTCCTGCTCCTCCAGTGTCTCAGAGGGTGACTTGACACCCAGGCTCTACGAGTGAAGGCTCAGGAACTAGCCAGGAGGGATGAATTCTCTTTATATTTTCAGCAAGCTGTGTTCCGCCGTGTCAGAATGGAGGGATGTGTCTCCGACCTCAGCTCTGTGTGTGTAAACCAGGGACCAAGGGCAAAGCCTGTGAGACGACAGCTGCCCAGGACACCTCGTCCCCAGTCTTTGGAGGGCAGAGTACTGCGGCCGCTTCCTCCTGGGTCCCTCCTGAGCAAGCCGCAAAGCGCACTTCATCTAAGAAGGCGGACGCGCTACCAAGAGTCAGTCCCGTGGCCCAGATGACCTTGACCCTCAAGCCGAAGCCTTCAGTGGGACTCTCCCAGCAGATCCATTCTCAGATGACACCCCTGTCTTCACAGAATGTGATGATACATCATGGCCAGACCCAGGAATACGTGCTCAAGCCCACATACTTCACAGCCCAGAAGGTGGTTTCTGGAGAGCAGTCCACTGAAGGTTCGCTCCCTTTAAGATTCGGGCAGGATCACGTGCCAGCACCTTTTCAGTTGAGTAACCACACTGGCCGCATCAAGGTGGTCTTTACTCCGAGCATCTGTAAAGTGACCTGCACCAAGGGCAGCTGTCAGAACAGCTGTGAGAAGGGGAACACCACCACTCTCATTAGTGAGAATGGTCACGCTGCCGACACCCTGACAGCCACGAACTTCCGAGTGGTAATTTGCCATCTTCCATGTATGAATGGAGGCCAGTGCAGTTCGAGGGACAAATGCCAGTGCCCTCCAAATTTCACAGGGAAGCTCTGTCAGATCCCAGTCCACGGGGCCAGCCTGCCTAAAGTGTATCAGCATTCCCAGCAGTCAGGCAAGGCGTTGGGAACACATGTTGTCCACTCGACACATACTTTGCCTCTGACCATGACCAGCCAGCAAGGAGTAAAAGTGAAATTTCCTCCTAACATAGTCAATATCCATGTGAAGCACCCTCCCGAGGCCTCGGTCCAGATACATCAGGTTTCAAGAGTTGATGGCCCAACAGGTCAGAAGGTTAAAGAAGCTCAACCGGGCCAGTCCCAAGCCCCTTACCAAGGCCTTCCTGTCCAGAAGACCCAGACGGTCCATTCCTCATACCAGCAAGTCATTCCTCACGTGTATCCGGTGGCTGCTAAGACCCAGCTGGGCCGGTGCTTCCAGGAAACCATTGGGTCACAGTGTGGCAAAGCTCTCCCTGGCCTTTCAAAGCAGGAGGACTGCTGTGGAACTGTGGGCACCTCCTGGGGCTTTCACAAATGCCAGAAATGCCCCAAGAAACCATGTAATCATGGGAATATTAATGAATGCCAACTACAGGGTGTGTGCCCTAATGGTGAGTGTTTGAATACCATGGGCAGCTACAGATGTACCTGCAAAGTGGGATTTGGGCCAGATCCTACCTTTTCAAGTTGTGTTCCGGACACCCCTGTGATCTCGGAAGAGAAAGGGCCGTGTTACCGACTGGTCAGTTCCGGAAGGCAGTGTATGCACCCTCTGTCTGTCCACCTCACCAAGCAGCTCTGCTGTTGTAGTGTGGGCAAGGCCTGGGGCCCGCACTGTGAGAAATGCCCCCTTCCAGGCACAGCTGCTTTTAAGGAAATCTGTCCTGGTGGAATGGGTTATACGGTTTCTGGCGTTCATAGACGCAGGCCAATCCATCACCATGTAGGTAAAGGACCTGTATTTGTCAAGCCAAAGAACACTCAACCTGTTGCTAAAAGTACTCATCCTCCACCTCTCCCAGCCAAGGAAGAACCAGTGGAGGCCCTGACCTTCTCCCGGGAACAGGGGCCAGGAGCGGTGGAGCCAGAAGTGGCAACTGTACCTCCTGAGAAGGAAATACCTTCATTGGATCAAGAGAAAACCAGACTTGAGCCTGGTCAACCCCAGCTCTCTCCAGGCATTTCAACCATTCATCTGCATCCACAGTTTCCAGTAGTGATTGAAAAAACATCACCTCCTATGCCTGTGGAAGTAGCTCCTGAAGCTTCAACATCAAGCGCCAGCCAAGTCATTGCACCTACTCAAGTAACAGAAATCAATGAATGTACTGTGAACCCTGACATCTGTGGAGCAGGACACTGCATTAACCTGCCAGTGAGGTATACCTGTATATGCTACGATGGCTACAAGTTCAATGAGCAACAGAGGAAATGTGTTGATATTGATGAATGCGCTCAGGATCAACACCTTTGCTCCCAGGGACGCTGTGAAAACACTGAGGGAAGTTTCTTGTGTATTTGCCCAGCAGGATTCATGGCCAGTGAGGAGGGTACTAACTGCATAGATGTCGATGAGTGTCTGAGGCCGGACGTCTGTGGGGAAGGGCACTGTGTCAATACCATGGGGGCCTTCCGATGTGAATACTGCGATAGCGGGTACCACATGACCCCAGGAGGCCAGTGCGAGGATGTTGATGAATGTTTGACTCCAAGTACTTGTCCAGATGAGCAGTGTGTGAATTCTCCCGGATCTTACCAGTGTGTTCCCTGCACGGAAGGGTTTCGAGGCTGGAACGGGCAGTGTCTTGATGTGGACGAATGCCTGGAACCAAAGATCTGCACAAATGGTACTTGCTCCAACCTTGAAGGATCCTACATGTGTTCATGCCACAAGGGCTACAGCCCAACTCCAGACCACAAGCACTGTGAAGATATTGATGAATGTCAGCAAGGGACTATGTGCATGAATGGGCAGTGCAAAAACACCGACGGCTCCTTCAGGTGTACCTGTGGGCAGGGCTACCAGCTGTCAGCAGCAAAAGACCAATGTGAAGATATTGATGAGTGCCAGCACCATCATCTCTGCAGTAACGGGCAGTGCAGGAACACGGAGGGCTCCTTCCGCTGCGTCTGTGACCATGGTTACAGAGCATCCGCCCTTGGAGACCACTGTGAAGATATCAATGAATGCTTGGAGGACAAGAGTGTTTGCCAGGGAGGAGACTGCATTAATACTAAAGGGTCCTATGAATGTACTTGTCCAGATGGATTCCAGCTAAATGACAATAAAGGATGTCAAGATATTAATGAATGTGAACAACCCGGACTCTGTGGTCCTCATGGAGAATGTCTAAACACAGACAGTTCTTTTCACTGCATCTGCGAACAGGGTTTCTCAATCTCTGCAGATGGACGCACGTGTGAAGATATTGATGAATGTGTAAACAACACTATTTGTGACAGTCACGGGTTTTGTGACAATACGGCTGGCTCCTTCCGCTGCCTCTGTTATCAGGGCTTTCAGGCCCCACAGGATGGGCAAGGGTGTGTGGATGTGAACGAATGTGAGCTGCTCAGTGGCGTGTGTGGTGAAGCCTTCTGTGAAAATGTAGAAGGGTCCTTCCTGTGTGTGTGCGCTGACGAAAGCCAGGAGTACAGCCCCATGACCGGGCAGTGCCGCTCCCGGCTCTCCATGGACTCAGAAGTAGATGAACCCAGAGAAGAAAAGAAAGAATGCTACTATAACCTGAACGACGCCAGTCTGTGTGACAACGTGCTGGCTCCCAATGTCACCAAGCAGGAGTGCTGCTGCACCTCCGGTGCTGGGTGGGGAGACAACTGTGAGATTTTCCCCTGTCCGGTCCCGGGGACTGCTGAATTCACTGAAATGTGTCCTAGAGGGAAAGGTTTTGTTCCCTCGGAAGAATCCTCTTATGGCGTTGATGGTGAAAACTATAAAGATGCAGATGAATGCCTACTTTTTGGACAAGAGATCTGCAAAAATGGCTTCTGTATGAACACTCAGCCTGGTTATGAATGCTACTGTAAGCAAGGGACATACTACGATCCTGTCAAATTGCAGTGCTTTGATATAGACGAGTGTCAAGACCCCAACAGTTGCATTGATGGCCAGTGCATTAATACAGAAGGCTCTTATAACTGCTTCTGTACACACCCAATGGTCCTGGATGCTTCAGAAAAAAGATGTATCCGACCAACTGAATCACATGAACAAATTGAAGAAACCGATGTCTACCAAGATCTGTGCTGGGAACATCTGAGTGACGAGTATGTGTGTAGCCGCCCTCTTGTCGGCAAGCAAACAACATACACGGAGTGCTGCTGTTTGTACGGAGAGGCCTGGGGCATGCAGTGCGCCCTCTGTCCCATGAAGGATTCAGATACCACAAGGAGAGGAAGATGAAATCTGAGGAGGCGAATGCAATATATATGACTTGAGT EMBV3_43128 CAAACACAGTGCACGATTCTCTGAGCGCAAGGACCCTCAACTCACCCTCAGTGTTTCAGT Gene GeneID:533078|ARCN1:XM_002693124:550_cdna Constitutive 0 NULL GeneID:533078 15 GENE ARCN1 NULL archain 1 EMBV3_10380 CTCACAGCCATCCTTCCTCAGGCAAAATGACCCTAAAGACCTAACTTCGTCTCATAGACC Gene BVV0102_324868 - 1 EMBV3_26471 GK000027.2:26717662-27623937 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24305 AGGTGACAAATGAGACCCTGACCTTGACCTTCACAGTTCTGCAAGACATCCCAGTAAGGG Gene GeneID:513856|A2M:NM_001109795:34_cdna Constitutive 0 NULL GeneID:513856 5 GENE A2M NULL alpha-2-macroglobulin EMBV3_21669 CAGGCAATAGATCAAAACCCTGTGGTTACTGCGGACTACATAGGAAGGGGCCTATAGATC Gene BVV0102_080066 + 0 NULL GK000028.2:21886033-22418863 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177648 TCONS_00249639 TCONS_00129783 TCONS_00224113 TCONS_00249539 TCONS_00064812 TCONS_00238894 TCONS_00071186 TCONS_00148672 TCONS_00250720 TCONS_00116100 TCONS_00066271 TCONS_00080603 TCONS_00124846 TCONS_00020157 TCONS_00078719 TCONS_00023360 TCONS_00135776 TCONS_00153678 TCONS_00129573 TCONS_00242885 TCONS_00207069 TCONS_00253719 TCONS_00177296 TCONS_00209711 TCONS_00175855 TCONS_00023614 TCONS_00218945 TCONS_00252107 TCONS_00013635 TCONS_00148280 TCONS_00250930 TCONS_00008224 TCONS_00021569 TCONS_00161097 TCONS_00249011 TCONS_00123620 TCONS_00248864 TCONS_00224475 TCONS_00010053 TCONS_00107179 TCONS_00238307 TCONS_00239419 TCONS_00039951 TCONS_00090421 TCONS_00131137 TCONS_00238933 TCONS_00021878 TCONS_00189806 TCONS_00038458 TCONS_00063181 TCONS_00070920 TCONS_00178417 TCONS_00062744 TCONS_00234065 TCONS_00252226 TCONS_00224484 TCONS_00209636 TCONS_00122282 TCONS_00007431 TCONS_00245928 TCONS_00186813 TCONS_00124585 TCONS_00037818 TCONS_00064462 TCONS_00178325 TCONS_00233372 TCONS_00161667 TCONS_00079609 TCONS_00167260 TCONS_00153218 TCONS_00123168 TCONS_00065823 TCONS_00063486 TCONS_00063080 TCONS_00200574 TCONS_00199802 TCONS_00197601 TCONS_00109026 TCONS_00238327 TCONS_00070839 TCONS_00040179 TCONS_00038932 TCONS_00224483 TCONS_00010471 TCONS_00021595 TCONS_00199424 TCONS_00142488 TCONS_00115865 TCONS_00135686 TCONS_00089437 TCONS_00208264 TCONS_00161835 TCONS_00198813 TCONS_00170823 TCONS_00116665 TCONS_00250579 TCONS_00078580 TCONS_00122313 TCONS_00177995 TCONS_00020023 TCONS_00251907 TCONS_00222114 TCONS_00199037 TCONS_00109858 TCONS_00110403 TCONS_00219166 TCONS_00079498 TCONS_00007359 TCONS_00031910 TCONS_00251929 110 XLOC_131641 XLOC_107421 XLOC_152582 XLOC_078496 XLOC_137409 XLOC_152482 XLOC_039536 XLOC_145560 XLOC_042958 XLOC_090552 XLOC_153663 XLOC_070269 XLOC_040985 XLOC_049487 XLOC_076389 XLOC_010835 XLOC_047607 XLOC_014027 XLOC_081999 XLOC_093441 XLOC_078286 XLOC_149548 XLOC_125588 XLOC_156658 XLOC_107070 XLOC_128222 XLOC_105634 XLOC_014281 XLOC_132264 XLOC_155048 XLOC_008165 XLOC_090162 XLOC_153873 XLOC_003782 XLOC_012242 XLOC_097989 XLOC_151954 XLOC_075172 XLOC_151807 XLOC_137538 XLOC_005605 XLOC_063090 XLOC_144974 XLOC_146085 XLOC_023768 XLOC_055202 XLOC_079842 XLOC_145599 XLOC_012551 XLOC_115843 XLOC_022282 XLOC_037908 XLOC_042697 XLOC_108190 XLOC_037471 XLOC_143544 XLOC_155167 XLOC_128147 XLOC_073837 XLOC_002992 XLOC_150855 XLOC_112864 XLOC_076129 XLOC_021647 XLOC_039186 XLOC_108098 XLOC_142854 XLOC_098554 XLOC_048494 XLOC_102096 XLOC_092983 XLOC_074722 XLOC_040542 XLOC_038213 XLOC_037807 XLOC_122226 XLOC_121454 XLOC_119262 XLOC_064931 XLOC_144994 XLOC_042616 XLOC_023996 XLOC_022752 XLOC_006022 XLOC_012268 XLOC_121077 XLOC_086913 XLOC_070034 XLOC_081909 XLOC_054222 XLOC_126777 XLOC_098720 XLOC_120466 XLOC_103665 XLOC_070831 XLOC_153522 XLOC_047468 XLOC_073868 XLOC_107768 XLOC_010701 XLOC_154848 XLOC_135423 XLOC_120690 XLOC_065762 XLOC_066307 XLOC_132485 XLOC_048383 XLOC_002920 XLOC_018155 XLOC_154870 Coding TCONS_00224475 XLOC_137538 NonCoding NonCoding - 8:13383418-13768387 - TSS168317 2667 2 TCONS_00224475_1 67 0.609298837645294 6 0.993087737162569 0.00577162930397718 0.00663398702964 0.00488151074879654 0.00356398700016779 0.00265022225946818 0.000976234238232873 0.00334380319684571 0.00308204822188015 0.00290563957999604 0.000858353390255781 0.000156026994691882 0.000240333454903475 0.000511196604629366 0.00194551669850446 0.000716768131347224 0.000168199852765404 2.94994401086811e-15 1.21977264948532e-20 0.00326511152950213 0.0021123544625592 0.000703991186807103 0.000179140648996468 2.35112685963468e-05 0 0.00247775431828695 0.00301703821508815 0.00126999753872809 2.28984187244052e-05 8.6506542528824e-05 0.000125044236479381 NM_206843.2 ASIP Bos taurus agouti signaling protein (ASIP), mRNA. 1e-56 226 90.91 0.0614923134608174 NM_012311.3 KIN Homo sapiens KIN, antigenic determinant of recA protein homolog (mouse) (KIN), transcript variant 1, mRNA. 7e-08 64.4 77.65 0.0296212973378328 0 noncoding 0 0 0 0 -0.40753029901717 0.144578082182638 -0.0300040457337731 0.519210748098019 GTGCTGCAGAATTGCCAGGTGAATTTCCCAGCTTGCCCTGCGGCTCCCCAAGGCTGTTAGTTCCGCCCAGCCCGCGCCTCACAGAACTGAAAGGCCGAGCGTGCAGACACATCAAGCTAAATTGCAACAGTGGAAAGGGGAAGTGAACTGAGAGTCCTGAGATTGGAGTCCTGCTCTCTAATTTAGTCCGGGAACCACTTGGATAGGTCATCCCATTCTCAGTACTCGGTGCAGAGATGACTGGAACCTTCCATTGAAACTGCCTTGCAGCTTGATGTCTTCCTCTTGTTCAACTTCCTTTGTTCTCATCCACGGCTGATGACCCCAAAAGAACACAGCCTCCCGCTTTCTGCTTCAGAAAGAAGTCAACCTGTGACAAGACAAACTCAAGCCCTTGGCTGCGTGGGCGCAGGAGGGCCTAGAGGAGCTATTCCACATTCAAGGTCAGAAGGGGCAGCGGTGAGGAGATACCCCTCATCCAAGGTAAGGAGCAGCAGCTGCGCTTTGCTGGAACAGCCGTGAAGAGATACCCCACGTCCAAGCAATGAGTGAGAGATCCTGCTGCTCCACAAGCAGCGCTGGGGTGTTGTCAGTGTTCTGGAGTTTGGCCATCCTAATAGGGCTTTTGCATTTTCATCAGTGAATCTTTAATAACTGGAACAATGGATGATACACAGTATGTGCTTGATAGATATTTTCAAATGACTGAACAAATTTTTAAGAATTACTTCTTCTGGAGGAGGAGCTAAGATGGTGGAGGAATAGGACGGGGAGAACACTTTCTCCTCCACAAAATCATCAAAAGAACATTTAAACACCGAGTAAATTCCACAAAACAACTTCTGAATGCCAGCAGAGGACATCAGGCACCCAGAAAAGCAACCCATTGTCTTCAAAAAGAGGTAGGAAAAAATATAAAAGACAAAAAAAGAGACAAAAGAGGGAGGGACGGAGCTCCGTCCTGTGAAGGCAGTCTTAAAAAGAGAGCAGTTTCCAAACACCAGGAAACATTCTCACTGCCGAGTCTGTGCCAAGCCTTGGAAGCACAGAAGGCAACATAACAGGGAGGAAAAATAAATAAACAATTAAAACCAACAGATTACAAGCCCTGTGGTAACTCCCCCAGTGGAGAAGCAGCTCACACGCCTGCACCCGCCACTAGCAAGCGGAGGCTGGGCTGGGCAGGGAGGTGCGGAGTGGGCTGCATCACTTAGAGTAAGGATCTGGCCTGAAAGCCCCAAGCGCTATCTGAGCAAACTAATTTGTGCTAGCAAACCAGACTGTGGGATATCTACCATGCAACCTAAGGCATCTCCAAGCCCGCTCACGGAACAAAGGACTGAACAGAGATAGCCGGCTGCAGACCATCCCCCTCCGGTGACAGGCTTCTCCAGAGAGACATTATCTACAAAACTGTAAGCAGGCTTCTTTGCTAACTAAGACTTCTTGGGGTTCTGAACGGTCAACATCCGCCTAAGAAGGTGCACTGGTTGTACACCCAGATAACCAAGCAGCGGGGAGGCGATAAGTCGCAGCAACCGTGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGAACTGGGAAGGGCACAAAATGCAGGCCCAACTGAATTTGCGCCTCTGAGGACTATCCGAGTGCCTGAACCTGAGTGGCTTAGACCTGGGAGGTGCAGACAGCCCAGGGCCAGCCTCGGATGGTTCCCGGCAGAGCAACCTAGAGCCTGAGCAGAGTGGGCAGGGAGGCTACATGCGCTGTGAGCAGGGGCAGGCCCAGTGTGGCTGACGCACTGCGAGCATATGCCAGTGTTATTTGTTTGCAGCATCCCTCCCTCCCCACAGCGCGACTGAACAAGTGAGCCTAAAAAAAAAAAAAAAAAAGTGTCCACCACCCCCCGCTTTGTATCAGGGCGGAAATCAGACACTGAAGAGAACAGCAAACAGAAGAAGCTATAACAGAGGGAACCGCCTTGGAAGCGACAGGCAATAGATTAAAACCCTGTCGTTAGTACCGACTACATAGGAAGGGGCCTATAGATCTTGAGAAATATAAGCCGGACCAAGGAACTAGCCGAAAATGAACTGACCCCACAATACCCACAACAACACCAGAGAAAGTCCTAGATATATTTTTAATTCCCATTAATGCATATAAATGATGATTTATCTATAATTATGTAAAATGCTTCACATTTCTCCCTGCATACTATCATGTGTCATATGTTATTGAGAGATCAGACTTTGAAAAGGCAATCTGATCAGATTATTCCCCTTGTTAGGCTTCCCATTGTTTACCAAATTTAAGGTAGATGTCACACCTCTATAAGTTCTTTCATAACTTGTTCTTGATTGACGTTCTTAGGCTAATTTTCCTACAGGGAAACATATTCCAGATGCTCCAATCAAACAAGAATATTTGCTATTTCTCATGGAGAAATCAAGTTTCCCTGCCTCTGTGATTCATATAAGGCTAGTCTCTCAACTTGGAATACTTCTTTCTCTGGATAATATGTCTGAATATAAATGACACTAACTTGAAGTTCTTCTCATAATGCCAATGAAATGTGATTTTTGTCCTTTCCATTATTTTCCTTGAAACTTTCTGTTTCTCCATGAAGGTGCTATTCCTTACTGATTAAAGTAGCTGAATCTGAAACCAGCTGCCTGGGC TCONS_00226955 r 5' 713639 TCONS_00226955 r 5' 713639 EMBV3_43789 AGCCCCTATTATGGCTGTGGTTATGGAAGTAGATACGGCTGTGGATACGGCTCAGGATAC Gene GeneID:100301407|LOC100301407:XM_002684629:133_cdna Constitutive 0 NULL GeneID:100301407 1 GENE LOC100301407 NULL hypothetical protein LOC100301407 EMBV3_09148 TCAACCTTAGTCCAGAGAAAGGCTCTTCTCACCACGACGATTACCTGAACTTGCACCTGC Gene GeneID:616698|LOC616698:XM_002685072:200_cdna Constitutive 0 NULL GeneID:616698 1 GENE LOC616698 NULL similar to non-POU-domain-containing, octamer binding protein EMBV3_15533 TCCGGAAGTGACGGAATTAGGGGAGAGGATCCGGTGAGGATTTCGGAGAGATGGCAGCGT Gene BVV0102_179067 + 0 NULL GK000011.2:86918107-86946734 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025803 1 XLOC_014832 Coding TCONS_00025803 XLOC_014832 Coding Coding NOL10 11:86940972-87038435 j TSS18638 3422 1 TCONS_00025803_6 683 22 0.965114608770598 0.000155025480847854 4.18314343881248e-33 2.70160785562902e-05 1.79590076289732e-104 3.00860993966476e-28 9.62165117743829e-06 2.14428593550579e-81 2.14091167128743e-28 1.45734939274277e-81 1.04700613593399e-41 1.41544777567132e-37 4.79144620623687e-27 1.29292431767217e-43 4.52302863011395e-26 2.28463364154524e-30 0.000150951835574434 3.70348205613751e-31 7.02123044099471e-25 2.00670843479494e-81 0.00178045280279647 7.06288073213146e-06 9.77995474270033e-06 8.23445280179876e-28 2.32458851969597e-05 1.49315861917651e-77 1.23361730382347e-27 1.12525561065178e-45 2.44121198128198e-31 1.38020286005204e-05 2.73644419952396e-05 NM_001075740.2 NOL10 Bos taurus nucleolar protein 10 (NOL10), mRNA. 0.0 5146 99.45 0.83927527761543 NM_024894.3 NOL10 Homo sapiens nucleolar protein 10 (NOL10), transcript variant 1, 0.0 2771 89.19 0.608708357685564 TCONS_00025803_6 sp|Q9BSC4|NOL10_HUMAN NOL10_HUMAN Nucleolar protein 10; 0.0 1273 95.93 0.998535871156662 1 coding 0 0 0 0 0.0266605082240819 0.8041726812558 0.012635772690491 0.874708917551521 GCCAGTGACTGCGGGGAGGGCACCATCCTGGCACGGAGGACCGAGAACACCTTGTTCTATCTGGCAGAAAGCACTGCATTCCTTCAAGTGTGTTTCCTGACTCTAAGCTATGACATTTCTTGTTGGAGAGACAAGGTGTATAACTGGGCATGTTTGAAACAACCATCATCTGTCAGAGAGCTGTGCTGTTTTCAATATTCCAAAGGCCAAAAGGTCTCCTTCTCTACCTGGCTTCACTGACTGGGAGCCACTCGCCCCATTCCCGAAGGCTTCCAGTCAGCCCGGCCAGCCACGCCCTCCGGGGTACCTCGACGCCTCGGCCCGGGCAGCGACCCTAAGAGCTTCCTGCGTCTCCCTGCCGTGAGGAGGGAGAGCGATTTCGGCCCTCCCCATCTTCACATGGCTCCCAGGACGCTGCCATCTCTCCGAAATCCTCACCGGATCCTCTCCCCTAATTCCGTCACTTCCGGAATCGGCCATTTCCCACCCCCCGCCCCAACTTCCCCGGCACCCGGAAGTGCGTAATCACCCAGCGCCGGCGCTGGCCGGTCCTCCGGGAGGCTGTCTTAAGTTTCTGATGCTCGCTTGCTCCGCGTGGAGAGGGTCCCGGACAGGAACGGGGATTGTTCCCTCCTCGGCGCCGCCATGCAGGTCTCCAGCCTCAACGAGGTGAAGATTTACAGTCTAAGCTGTGGCAAGTCCCTTCCCGAGTGGCTTTCTGACAGGAAGAAGAGGGCACTTCAGAAGAAAGATGTCGATGTCCGTAGGAGAATTGAACTTATTCAGGATTTTGAAATGCCTACTGTTTGTACCACTATTAAGGTATCAAAAGATGGGCAGTATATTTTAGCAACTCGAGTTCGATGTTATGACACCTACCAATTATCCTTGAAGTTTGAAAGGTGTTTGGATTCAGAAGTTGTCACCTTTGAAACTTTGTCTGATGACTATTCAAAGATTGTCTTCCTGCATAATGATAGATACATCGAATTTCATTCACAGTCAGGTTTCTACTACAAAACCAGAATACCGAAGTTCGGGCGAGACTTCTCTTACCACTACCCGTCCTGCGACTTGTACTTCGTTGGCGCAAGCTCTGAAGTTTATAGATTAAACTTGGAACAAGGACGGTACCTGAATCCTCTACAGACTGATGCTGCGGAGAATAATGTTTGTGACATAAATTCAGTGCATGGCTTATTTGCCACAGGAACGATAGAGGGCCGAGTAGAGTGCTGGGACCCGAGGACCCGGGGCCGAGTTGGTGTGTTAGACTGTGCGTTGAGTAGCGTCACGGCTGATTCAGAAATAAACAGTTTGCCAACGATCTCTGCTTTGAAATTTAATGGTGCCTTGACCATGGCCGTTGGAACATCCACAGGGCAGGTTTTATTGTATGATCTTCGATCTGATAAGCCATTGCTAGTTAAAGATCACCAATATGGGTTGCCCATTAAATCAGTTCACTTCCAGGATTCCTTAGATTTGATTTTGTCCGCTGACTCTCGAATTATCAAAATGTGGAATAAGAACTCAGGAAAAATATTTACTTCCTTGGAGCCAGAACATGACCTTAATGATGTCTGCCTCTACCCCAGCTCAGGAATGCTTCTTACCGCCAATGAAGCCCCCAAGATGGGCATCTATTACATTCCGGTTTTGGGTCCTGCTCCCAGGTGGTGCTCCTTCTTGGACAACTTGACAGAGGAATTAGAAGAGAACCCAGAAAGCACAGTTTATGATGATTACAAATTTGTCACCAAGAAAGACCTTGAAAATTTAGGGCTCACACATCTCATTGGATCACCTTTTCTTCGGGCATATATGCATGGATTTTTCATGGATATAAGGCTCTACCACAAGGTGAAATTGATGCTAAATCCATTTGCTTATGAAGAATATAGGAAAGATAAGATCCGGCAGAAGATAGAAGAAACACGAGCACAAAGAGTGCAACTAAAGAAATTGCCAAAAGTTAACAAAGAGTTGGCACTTAAATTAATTGAGGAAGAGGAGGAGAAACAAAAATCTACCTGGAAAAAGAAAGTTAAGAGCCTTCCTAATATTCTCACCGATGATCGATTTAAAGTTATGTTTGAGAACCCTGACTTCCAAGTAGACGAAGAGAGTGAAGAATTTAGGCTTTTGAATCCACTTGTTTCCAAAATTAGTGAAAAAAGGAAGAAGAAACTGAGACTCTTAGAACAACAGGAACTTCATGGAAAAGAAGAGGAGGAAGAACCGGAAGGAAAACCAAGTGATGCAGAAAGTTCTGAGAGTTCAGATGATGAAAAAGACTGGGTCGCAGAGGTCAGGAAACAGCGCCGGCTTCTCCAACAGGAGGAAAAAGTGAAGAGGCAGGAACAGCTCCGGGAGGATCAGCAGACGGTCCTCAAGCCGCAGTTCTATGAGATCAAAGCTGGCGAGGAATTCAGAAGCTTCAAAGATTCGGCCACAAAACAGAAGCTGATGAATAAAACCCTTGAAGACCGGTTGAAACTTGAAGCGAAAAACGGAACATTGAGTGTATCCGACACCACGGTTGGCAGCAAACAACTGACATTTACATTAAAGAAGTCGGAGCAGCAGAAGAAGCAGCAGGAGGCTGAGAAACTGCACCGGCAGGAGAGGAAGGCTGTGCGCCGTTCGGCAGGCCATCTCAGGTCCCGGCCCAGGCGGGGGCGGCCATTCCACTGATTCTGGAGCAGGCCCTGCGTGTGACCCCGAGGAGCTCAGTGCATCTCCCCTGCCGGATCGTCGTTCATTTGTGCATGTTAGCCACAGCCGGGTTTGGGCAGCCCTCAAGTCCCTGGGAACCCTCGCATTTGCAGAGAGAAGTCCAGACCGGGCCGTGGTCCCCAGGCCTCTGGTCAGACTCTGGGGCTGGGCCCGCTGGCCATGTGGCGCTCCGGGGCACCTCTGTGCCGTATGGCTCCCTGAGAACATTATTCCTTCCCCCTGGTTTTAATCCAGTGTGAGAGGTGGTTGTCTTCTAATACTGTGAGATGTGCCCCGTGAACTGAGAGGGTCTCCTGGGCTGCAGACCAGGGCCCGGGGTTTTCTGGAACTGTCTGCCCTGCCCGCTGCCACCCACAACTCCGCTGGGCTCCCACCCCCACCCCAAGAGGCCACTCCCGTCTCTCCCGACTATGGGCTTCGGTCAGGTTTGTGTTTTTAAGAATGTGCCGGTAAGTGTGTTTATGTGTTGGTCTGGGATTTTTTTAAACATATTTTTATACCAAGGGAATGTAAATTAAATGGTAATAGCCATTTAAAACAGAAAGTGGAAGCTACTGGATATTCTTTTAACTTGGCAGAGGGTTAAATACAGGTTTTTTTCCCCCAGTGTCTCAAGTGCAATTAGAGATACACTGGCTGGAGACAACATGTATAAAAATAAATGCTTTCATTTGAACAGTTTC EMBV3_15438 CCCAAGCCTGGGAGCATGATTTGATGTGTAATTCTGGTTTTATGGCTTGGCATAGTACTC Gene BVV0102_088537 + 0 NULL GK000020.2:22139423-22297349 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26921 ACGTGCAGTGTGCCTCCATGTGTGAGGAACTTGTTTTCTAGGCTCATGCTTGCAGAGCTA Gene GeneID:526189|TMEM185A:NM_001077968:14_cdna Constitutive 0 NULL GeneID:526189 2 GENE TMEM185A FAM11B TMEM185B transmembrane protein 185A EMBV3_41095 CCGCGTCCGCCTAAAGGCGCACTATAGCGGAATCCATCTACCGCCGTGGAGCCAGAAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42214 CAGGCTGGTTGTAAGGCAACTGGTAGTGGAGAGGCAAGCCTTTGGTAACACAGCACCATA Gene BVV0102_355477 + 0 NULL GK000025.2:42394692-42442951 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21927 GCAGTCACAGCTACAGACGGACTAAGCGAAGAGCTTACAGATGAGGCATTTACTAACCAG Gene GeneID:100335987|LOC100335987:XM_002690310:1_cdna Constitutive 0 NULL GeneID:100335987 9 GENE LOC100335987 NULL nuclear transcription factor-Y beta-like EMBV3_39432 TGACCACCTTCAGGAGCCGTGCGCGCATCGCCCCCTTTGCCAGCGACATCCACACCATCT Gene GeneID:787231|RD3:XM_002694292:375_cdna Constitutive 0 NULL GeneID:787231 16 GENE RD3 NULL retinal degeneration 3 EMBV3_35922 TCTTGTCATCGACCCTTCGGGCCAGGCGGCCACATTCCTGCGCTATCAGGACACCAACTA Gene GeneID:506831|LOC506831:XM_002692551:180_cdna Constitutive 0 NULL GeneID:506831 14 GENE LOC506831 NULL similar to mCG141688 EMBV3_02768 GACTGTAGCTCTATCACTAGCTGAATGACCGCGGCAGACCTCTTCACCTTCCCTCTGAGT Gene BVV0102_122331 + 0 NULL GK000015.2:55785211-55810203 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061909 1 XLOC_037165 Coding TCONS_00061909 XLOC_037165 Coding Coding MOGAT2 15:55808232-55816953 j TSS46016 2302 2 TCONS_00061909_2 162 0.0981754995655951 4 0.736467889908257 0 0 0 0 0 0 0 0 0 0.000159123080504182 8.9498880347169e-06 0.000118050469655953 0 0 6.74915939969241e-13 0.000331032679737735 7.2121266092242e-06 5.4498094733243e-05 2.35519587012839e-13 0 0 0.000196638103477863 0.000151439541158391 0.000364132425091236 0 0 0 0.000162728585455114 0.00019823352394844 0.00137841305366682 NM_001001154.1 MOGAT2 Bos taurus monoacylglycerol O-acyltransferase 2 (MOGAT2), mRNA. 0.0 2311 97.86 0.589052997393571 NM_025098.2 MOGAT2 Homo sapiens monoacylglycerol O-acyltransferase 2 (MOGAT2), mRNA. 2e-159 567 82.67 0.240225890529974 TCONS_00061909_1 sp|Q3SYC2|MOGT2_HUMAN MOGT2_HUMAN 2-acylglycerol O-acyltransferase 2; 1e-76 235 82.22 0.930555555555556 1 coding 0 0 0 0 -0.00261678674384968 0.985767246443308 0.0481758269928078 0.341737734704944 TCTGCATTGCTGTCTTCATAGGCCTCCTGTTCACAAGATTCTGGATCTTCAGTGTCCTATATGCAGTCTGGTGGTACCTGGATCTATCCAAGCCGTGGCAGGGGGGCAGGCGCATTGAGGCCTTCAGGCGCTGCGTCATATGGAGGTACATGAAGGACTATTTCCCCATCTCGCTGGTCAAGACTGCCTACCTGGACCCCTCCCGGAACTACCTTGCTGGCTTCCACCCCCACGGGGTTCTGGCCACCGGAGCTTTTACCAACCTGTGCACGGAGAGCACCGGGTTTTCCTCACTGTTCCCTGGCATCCGCCCACATCTGATGATGCTGAACTTGTGGTTCTGGACTCCTTTCTTCAGGGATTACATCATGTCAGGGGGGCTGGTCCCAGTAGACAAGGAGAGTGCTGCTCACATTCTGAGCAGGGAAGGAGGTGGCAACCTCATGGCCGTCATTGTTGGGGGCGTCCAGGAGGCACTGGATGCCAGGCCTGGAGGCTACAAGCTGGTGCTGCGGAACCGCAAGGGCTTCATCAGGCTTGCCCTGATGCATGGGTATTGGGAAGAGGGCTCTGGGTTCAACTGAAGATTGGCAAGGATTGTGTTTTGGTAGGAAGACAGCACAGATGAATCCATTGACAGTGAAGATTCTGTGTTGGTGATCGATGTACTGTCTCATTCCCAAATAGCCAGAGAAGATTCTAGAAGGGAGATTTGGTGATTAAAGGGAATAGGGTCAAGGGTCATATTACTGAAAACTTGCATTACATCTGAGTCTAGGGCATTTGGGAGAATGTTGTTTGGGGCACAGCTTAGAGCTGTTCTCTTACCTTGAAGTATCTGTGAAGAATACAAGCTAACTGGGGAAGAAGAAATTTTTCCAGAAAGTTTGCATGTTTTATACCTGGAATGGCTCTCTGAAGCATTCTTTCTCCTGTCATGGTGTGACTGGAAACCCATGGTACAGAGAGGAGCCATGACCTGCCTAAAATCACAGAGCAAGGCTGTGGCAGGTCTGGAGAACAGCCAAGGCCTCCTACTTTTGCCCCAGGGCTCTGTCCTCTGCTCCAGTTCCTGCTCACTAGGTCCCTGCAGGAGGCTAGGTGACCAGCTTGTGCCTTCTTGCCCCTCCACACTCACTTTCTCCTGTCTCCTCTAGGGCAGCTCTGGTACCTATCTTCTCCTTTGGGGAGAATGACATATTCAAGCAGGTTGAGAACTCCCCTGGCTCCTGGGTGCGCTGGTTCCAGCACCGACTTCAGAAGACTGTAAGAGTCTCCATCCCACTCTTCTATGGCCGTGGAGTCTTCCAGTACAGCTTTGGTCTTATGCCCTACCGCCGGCCCATCACCACCGTGGTGGGGAAGCCCATCGAAGTGCAGAAGACACCACATCCATCCCAGGAGGAGGTGGACAGGCTGCATCAGCGCTACATGAAGGAGCTGGAAAACCTCTTCGAAGCCCACAAGCTCAAGTACAATGTCCCCAGAGACCAACACTTGGAGATCTGCTGAGTGCCTCCCCAGAGGAGGGGCTCCTCCAAAGGGCAGTGCTGGCATTAGGGAGGATGGAGGAAGGTTCTGTGATCCCAGAAGGCTTCATGGAGGTGTCTGTTGAACACATCTCCAGAGCCTTCTGGAGACTGACTCCTGCATCTCCATCCTATGCCAGGCCTTGGGTCACAGCTGGCTCCTTGGCAGAGGAGACCAGACTCTGGCATAGGTGATTTGCTCTCCTGCACTGATTCCTCTGTAGTGGGCCCTTTCCTTCATTCTGCCCACCTGAGAAATGGGAGAGAATGATGTGTGGTGTCTCTGTCCTCTGTGGTCCTGTCACTCAATGGGCAGGACAAGAACAGCTCCAGTTAGCAGGTTTCTCTTCCTCTGCCTTGAATGACAGCACAGAAGCAGCCCCCAGCTGCTACAAGCTCTCCCATCCTTCATTCTGCCTATCCCAGCTCCTCCCTCCCTGAGGTGAAGAGGAGGGTGAGGCCACAACATCCTGAATTATTCTGGCACCTTCGAGTTTCTGAGTCCTCCGAGCCCCAGAGTGGCAGCCAGAGGGGCCAGAAAGTGGGGAAGGAGACTGTAGCTCTATCACTAGCTGAATGACCGCGGCAGACCTCTTCACCTTCCCTCTGAGTCTCAGTTTCCCCCAGGGACTAAGATGACCTCTGACCTCAGCTGTGATGTCACATTGGCTGAGAGCTCCGTGAGTCAGCCACTGTTCCTCCTTTGTAACTTCAGCCCTGACTGTGACACAGAAGGGAGCTCCATAAATGTCAATTCATCAATGAAAGAATTC EMBV3_02001 GCCTGCTAAACAGACTTCCCTGGTAAAAATCTGCCTGCAATAAGGGAGACCTGGGTTCAG Gene BVV0102_019479 + 1 EMBV3_07882 GK000001.2:11161307-12795328 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32971 CATCGTCTTCCTCAACAAGTGCGAGGCCTGGGTGTCCAATCTGCGCTACAACCACATGTT Gene GeneID:281117|DLK1:NM_174037:115_cdna Constitutive 0 NULL GeneID:281117 21 GENE DLK1 NULL delta-like 1 homolog (Drosophila) EMBV3_01600 AAGCTTCAGATATGGGACACAGCGGGTCAGGAAAGATTTCGAACCATCACGACAGCCTAC Gene GeneID:614242|RAB8B:NM_001076317:136_cdna UTR3_Alt 2 NULL GeneID:614242 10 GENE RAB8B NULL RAB8B, member RAS oncogene family EMBV3_19492 CAAGGGTTCAGGGTGGGCAGTATGGGACCCCTGGACAACTTTTGAGGACAATTAGCTGAA Gene BVT0102_166732 + 0 NULL GK000008.2:45817399-45865187 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00227522 TCONS_00227523 TCONS_00227524 TCONS_00227525 TCONS_00227526 1 XLOC_138263 Coding TCONS_00227524 XLOC_138263 Coding Coding APBA1 8:45861506-45949608 j TSS169837 8208 2 TCONS_00227524_3 429 0.112329434697856 12 0.906970408962441 0.00422448047203703 0.00198165484100914 0.00336484703519679 0.00274513596814356 0.00301215386953789 0.00112334078926238 0.00192098583314496 0.00182198687122287 0.00281190871156032 0.000563067806902209 0.00010872312655312 5.16351992385059e-05 0.00106709407752156 0.00104109156404727 0.000789787373261994 8.63429842749435e-59 1.14442784295605e-05 8.61411955995847e-20 0.00289753794461499 0.00312987303052629 0.00129735410792108 5.87639476574308e-06 6.710902817152e-22 9.52338709964759e-32 0.00298042843699871 0.00304972889893383 0.00215104520073353 3.02480981258492e-05 5.4099846298041e-05 7.52223818653739e-05 XM_005210012.1 APBA1 PREDICTED: Bos taurus amyloid beta (A4) precursor protein-binding, family A, member 1 (APBA1), transcript variant X1, mRNA. 0.0 8915 100.00 0.602095516569201 NM_001163.3 APBA1 Homo sapiens amyloid beta (A4) precursor protein-binding, family A, member 1 (APBA1), mRNA. 0.0 2643 79.26 0.365009746588694 TCONS_00227524_9 sp|Q02410|APBA1_HUMAN APBA1_HUMAN Amyloid beta A4 precursor protein-binding family A member 1; 0.0 737 99.72 0.997183098591549 3 coding 1 0 1 1 -0.0361273774329375 0.772626650066254 0.0127967128956627 0.804325669103977 CTTGTTTTTCCAGCCGGGTGGAGCAAAATGAGAGCGCAGTGAGCCGGCCCAGCCTCTCTCCCAGCCGTCCCCGACGCCCACCATGAACCACTTGGAGGGGGCAGCGGAGGTGGAGGTGACGGACGAGGCGGCAGGCGGGGAGGTGAACGAGTCGGTGGAGGCCGACCTGGAGCACCCCGAAGTGGAGGAGGAGCAGCAGCAGCAGCAGCACTATGCGGGTCGCCCCCGGCGCCGCCGCGCCGTCGAGGACCCTCGCGCCCAGCCTGGGCAGCAGCAGCAGCAGCAGGAAGAAGATGAGCATGGGGAGTGCCTGGCGCGCTCGGCTAGCACAGAGAGCGGCTTCCACAACCACACGGACACGGCCGAGGGCGACGTGATCGCCGCGGCCCGCGACGGCTACGACGCCGAGCGCACTCAGGACCCCGACGACGAGAGCGCCTACGCTGTGCAGTACCGGCCCGAGGCCGAGGAGTACACGGAGCAGGCAGAGGCTGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAGGCCATGAACGCGGCCTACTCGGGCTATGTCTACACGCACCGGCTTTTCCACCGCGGCGAGGACGAGCCCTACGCCGAGCCCTACGCCGACTACGGGGGCCTCCAGGAGCACGTGTACGAGGAGATTGGGGACGCGCCCGAGCTGGACGCGCGCGACGGTCTGCGGCTGTACGAGCAGGAGCGCGACGAGGCGGCCGCCTACCGCCAGGAGGCTCTGGGCGCGCGGCTGCACCACTATGACGAGCGCTCCGACGGGGAGTCCGACAGCCCGGAGAAGGAGGCCGAGTTCGCGCCCTACCCCCGCATGGACAGCTACGAGCAGGAGGAGGACATCGACCAGATCGTGGCCGAGGTCAAGCAGAGCATGAGTTCGCAAAGCCTCGACAAGGCGGCCGAGGACATGCCCGAGGCCGAGCAGGACCTGGAGCGCGCCCCCACCCCGGGCGGGGGCCGCCCCGACAGCCCCGGGCTGCAAGCGCCGGCGGGGCCGCAGCGGGCCGCCGGCGGCGAGGCGGTGCAGCGGTACAGCAAGGAGAAGAGGGATGCTATCTCCCTGGCCATCAAGGACATCAAGGAGGCCATCGAGGAGGTGAAAACCAGGACCATCCGTTCGCCTTACACCCCCGACGAGCCCAAAGAGCCCATCTGGGTCATGCGCCAGGACATTAGTCCCACCAGGGATTGTGACGACCAGAGGCCGGTGGATGGCGATGTAAGTGTGTGCGGGTTTGGGCTCGCTCAGCTCCACGAGCGGCCAGGAGGGGAGACGGGCCCTGGGTGGCGTCATTTGTCATTAGAAATGACTTGATGACAGAAATGATCTCTGGGCATGCTCAGAAACAGCTTGCGCTTAACAGCCGGTGAGCGAAAACTAGGTGGGAAGGAGTTAAGTGTTGAGAGATTGCGATAAATCAGTGGTTCTCAAACTGTCACTGGAGCACGTGTTCAGAACCTGGTTTCTAGACGCACCTCTTTCCATCCCCTAGTTTCACACTTAGACTTGGGGCAGGGCCTGCGAATTTGTATTTTTTAACGTTAAATAAAAAACAAGTCTGGATTGAGGAAGGAGAGACTTCATTGGAAAGTTACTGTTGTAACAGGAACTCTTGGAGTAGAACTGTGGGATCTGCAAGGGTCTCTAGGGTTAGGCAAAAGGGGATTCTTTCGTAGGTAGGAGTAAGCAAGGCCTGAAGGGACAAGATGTGAAGAAGTGGGATGAAGCATGGCTTGAACGTACTGCCCTTGATAGTGTTTTAATCTGAGAACAGCCTTTTCCTAGGAGGGGCTGCTGAGGAGGGGCGGTAAACTGGCGAAAGTCCAGGTACCTGGAAGAAGGTGAGAAGCTTAATCAAAGGTTGGTTAATAAGCATTCCGTTTTGACTAATCAGCTCAGCTAATCATTTCTCAGGCAAAGAATGGGAATTTGAGGGGTCTGTGTCTGGCCTTGTCATAGGTAAACAAAGGGGCACCTGTGAGTTACTCAAGTCCTATGGGAAAGAGGTTCTTTGCATAAGTCATATTCACAAACGAAATGGGAGGATTGGGGGGTCTTTAACCTTTGCTGTTTTCTGGGATCTCAGGGCTCATGTTAAGTTCAGCGTCGTCACTTATAAGTTCCTAGGTGATACTGATGGCTGCTGGTCCCAGGACCACAATTTGAAAACCACTGTCTTAAATCAACCCCTTATAGGTTTAAGATGAATAGTGGCCTTTTTAGAGGAAATCAAGGAAATTCTTCCAGGCCCTTTCTAGCCAAGGGGTGTTTACAGTTTGTTTGCCTTTTTTTTTTTTTCCCCTTCTCTGTGACTTACAAGAAGGGCTTAATTTTCATTTCTGGTGGTACCAGAGAGGGAGCTTCTCACCTCACAAAGACATGCTTTTGAACGGAAGTATACTTTCTTGTGAAGAGCTACAGAAAGCTGTTGCTGCCTCGTCGGCCTTTCACTTTCCATTTTTGAAATATCCAAGAAATTTGATAACTCGGCAAGCTTGGGTGTCACAGTCTACTCAGAAATAAATCAAGAAGGCTAACCTTTGCCCCCACTACCTGACTCTAAAGATTCTCTTTCTCCTCCAACTCTCACTTTTCCATTCTCTTGAATAATTTTTAAGCACTTTCATTTAAAATGGGAGCTTGGAGTAAAAGAAGGGTCAAGAGGTTAAATGTGGTTTCATTTAATTCTGCATTTTATGATTGCACCTATCTATTTCTGAGTATACCTTTTGGAGTGAGAAACCATTATTGGAAGCTGTTTGTTCATTTCACTTATAGGTAAAAGGCTGTGCAGGTCAGAGATGTCATTTGCCTCCTCTTTTAGTAACAGTCAGCATGGGCTGTTAACTGATTAAATCACAGGCACCTTTAAATCATGGGCTTCCCTGGTGGCTCAGATGGTAAAGAATGTGCCTGCCATGCATGAGACCCAGGTTTGATTCCCAGATCAGGAATATCCCCACTCTGGTGTTCTTGCCTGGAGAATTCCATGGACATAGGACTCCATAGGGTTGCAAAGAGGCGGACTCGACTGAGCAACTAACACTAAAGTGAAATTTCAACAACGGCTGTTAGCTGATTCAATCACTTTTAAGGCAGGGTTGGAACAGGCTGGAAAAGGATCTGCATCCTCCCCAGCCAGGGGGCGGCGTTGGTCCCCATCTCCGGGCAGTTCCTCACCCCTGGGTGCAGAGTCTTTGAGCACACCCCTTCATCCTGGTGACCCCGCGGAAGCCTCCACAAATAAAGAGTCAAGAAAAAGCTTGGCTTCATTCCCAACCTATGTTGAAGTTCCTGGACCTTGTGACCCTGAGGACTTGATTGATGGAATCATTTTTGCTGCTAATTACCTTGGCTCCACCCAGCTGCTCTCAGACAAAACTCCCTCCAAAAACGTGCGAATGATGCAGGCCCAGGAAGCAGTAAGCAGGATCAAGATGGCCCAGAAATTAGCCAAAAGCAGGAAGAAGGCTCCTGAAGGTGAATCTCAGCCAATGACCGAGGTGGATCTCTTCATTTCTACCCAGAGAATCAAAGTATTGAACGCCGACACACAGGAAACGATGATGGACCACCCTCTGAGGACCATTTCCTACATCGCAGATATCGGGAACATAGTTGTGCTGATGGCCCGCAGGCGGATGCCCCGCTCCAACTCCCAGGAGAATGTGGAAGCCTCCCACCCATCCCAGGACGGAAAAAGGCAGTACAAGATGATCTGCCATGTCTTCGAGTCTGAAGATGCCCAGCTGATTGCACAGTCCATCGGGCAGGCCTTCAGCGTGGCCTACCAGGAGTTCCTCAGGGCCAATGGGATTAACCCCGAAGATCTCAGCCAGAAGGAGTACAGCGACCTGCTCAATACCCAGGACATGTACAACGACGACCTCATCCACTTCTCCAAGTCGGAAAACTGCAAAGATGTCTTCATAGAGAAGCAGAAAGGGGAAATCCTAGGTGTGGTGATTGTGGAGTCTGGCTGGGGATCCATCTTGCCGACTGTGATCATAGCCAACATGATGCACGGAGGCCCAGCAGAGAAGTCAGGAAAGCTGAATATTGGGGACCAGATCATGTCCATCAACGGCACCAGCCTGGTGGGCCTGCCTCTGTCGACCTGCCAGAGCATCATTAAGGGCTTGAAGAATCAGGCCCGGGTGAAGCTGAATATCGTGAGGTGTCCCCCGGTGACCACCGTGCTGATCAGGAGACCAGACCTTCGCTACCAGCTGGGGTTCAGCGTCCAGAACGGAATTATCTGCAGCCTCATGCGAGGGGGAATAGCAGAAAGAGGAGGCGTCCGCGTGGGACACCGCATCATTGAAATCAACGGGCAGAGTGTGGTGGCCACCCCACACGAGAAGATCGTCCACATCCTCTCCAACGCCGTGGGGGAGATCCACATGAAGACGATGCCGGCTGCCATGTACAGACTGCTGACAGCCCAGGAGCAGCCCGTCTACATCTGAGGCCGCGCTCCGCGGTGGCATGCATGGAGGCCTCTCCTCACTTGTGGTTGTGTTTCTCGTGCTGCATCTGTGTGCCCACTGAGACCTTCCCCTCTCACGCCCAGCACTCGGTTTGACACGGAGGAAGAGAATCCGCAGTGACCTCCCTCTCTCTCTCTCCGGTTTGCTTTGTTTGTTTTAAATGCCAGGGAAGTTTTGTATACACTCCTTTGAGGCTGGAGAGCAGGTCAAAGTCACCCAGAGTCTGCCGAGGACCTTCCTGAAGGGCCCTTGCAGGAGGGGGCCCTGAGGAGGGTTGTCACCACGCTGCACCCTCCCTTTCCAAGAGGTGCAGACCTCTTTGGAGGAGCCCCTGGGGACGGTGAAGAAGCCGATTCCGCAGTGCCTACGATCCAATGGCTGATCTCTGCTCTCTTCCAGTCAGTTCATGGGAATATGGTAGTAATGGGGGAGCCGGCCCACCGTGTACTTGGAGCATCATACGCCATTTCCTCCCGGAATTTCTGAGCCAACCTTATGCCTCTTCTTTAGCCAGTTTTAGTTTCAACATAATTGTTTTTTCTAATGTGAACCTTTTCACCCTGGGATAGAAGGGGAACTATGGGGACGCGGATACCTGTGCAGAGAACTGGGCGATTCCCGAGGTTACCAACCATTAGATAAACACAGGCAGGTACTTCTGCCTTCTTCTACACCACACGTACGTACACACGTCTCACTTGCATATATTCCACCCTGCCCTCCTGCCCGCCACCAGTGAGGCACCCAGAGCCCCTGGAAAACCCACATGGCCTCTCTGTGAGGCCCCTTCCCCCACAGGTGAGGGCCGCGGGGGCCGGTGAGCCCTGTCCAGAGAGAGACAGCCCTCTGAGGCTGAGGTCCGGCCCTGCCGGCATCTCCTTGGCTCAGGGGGGTTCTGGTGGACTCCCATGCCCCCCCACCCCAACACACACACACCCCACACACTGGGAGTCTGGACAGGATGGACTGCTCCCCTTGAAGATGAGGAACCCGATGTGATCGTGTTAAGCTTCCTGGTCTAAGGTGAGACCGGCCGCCTTCTCTTCTCAGGGCCACGAGGCAGGATGTGACATTTGAGAGGCCAGCGCGGTACACAGACCACCAAACTAAGGGGACAGTCGGAACCTCAAGCGATGCCTAAGAATCCCCAGATGAATTCCAAAAACATCTTGCTGCCTCGGGGGCCTGAAAAAGCTTTTACTTGGTGTGGAATGTTGCGTGTTCTCATCAGGCGCCTCCCATCCGTGGGTTTCGTTCGTCTCAGTCGGTGCAGATGTTCTTGTAATACCTTGATTCTGAGCCAGTTTTCACTTACTCTTGGTCCAAAGAGCGCTTTTGTTTTCATGTGGGTGGGGTGTGGCTTCGTTTGCTTTTCGTTTTGTTCCGTTTGTGACCTCCACAGAGACAGGGTAAGAGAAACTATTTTGTGATATTATTATAGTCCCTGTTCTCAACATCTGGGCTATTTATGTTGTGTCTGTGGAAATAGCAACCTGGTGAGCACATGTTGGGTGGTATGGATTTATACCTCGAACAGAGCGATTTCAGGGAGGGAGAAAGTGAATGAGAAAAGACTGGGAACAAGAGACTTCTGCCAGAGAGGTGGTGCATTCTGGGATCTCTGTGCTGAGTTTTCTGCTTAGGCAGGAAAGCCAGGTGCTTCAGTGGCGTTAGTGGCTGGACTCCCAGTGTGACCGTGGGTCAGACCCTGCCAAAGAGAGGCTGTGCTGCCCACACATCCCCCCTGGGATGGGGCTGCCCCTTCTCCAAGGGTTCAGGGTGGGCAGTATGGGACCCCTGGACAACTTTTGAGGACAATTAGCTGAATGTTGCTAAGTTGCTGCTAAGTAGGAGATCAGCCCCAAGGCTAACCCACTGCGAACCTGAGGAGCCACGAACTTCAGTACCATTTACCAAACTATAGTGTCTGATGACATACAATTAAATACTAAAGAGTCCTGAGTTCACCTTACCTTTGCCAGAAAGAGTGGATAAAACAGGAATGCAGCATTCTGGGTGGTATTTGGATATAACCGGAGAGAGGCTCGTGCCGTCTGCTCCCAGGTGAGCTCTTGAGCCACCTGCCCCCATGCCCATTCAGAGGCATCGGTGATCGGCCACTGGCCAGGAATCCCGCCAGCACATCCCTGTGCAGCCCTCCACGTCGTTACAATGCAGCGTCTTCACCCAAAGCAGAGGAGGAGGCAGGCTACACTTTCTATTGATATTGTACAAAAATCTAGAAAGTCTGGTGGGTGTTTTTGCCAGTTTGGTAAACTGTCCTAGGAGACTAATGTTTTAGTATAAGATTATCCCACCACATACCTTTGTATCAATAAGAGTGGCTCCTCACACCCGGACAGCCAGATCTCTAGCTTGGTGGAGGTTCAGTCAGCTATAGTGTATTCTTACCGGCCTGACTGCCGGTAAGTCAGGGGAGTCAGCCCATCTTTAGAAGTTAAGCAGGAGGCTGGATCTTAACAGTAACTCCGTTTGGGAAGTCTCACGGGAAGTAATGGCCTGTTTCCCTCTGACATCCCAGTATCTATAGTTACATATGTAAATATCTGAAAGCCCCATGCAGTGGTGAAGACTGTGGACAGAGCAGCCTTCCCAAACGTGGCCCTAGGCAAAAAGCCACTCTTGCCACTTGGCTTGGACATGTGGTGACTCAGCTTTGGGGATAGACTCCCAGATCCATCTACTCTTCCTGGTCCAGCCAGGATGCGCCAGAACCTGCCCTGCCTCTGCCTTCTCAAATGTGACCATTTCAGGGAGCCACCCTCAGCCTTGGGTTCACGAGAAGATGAAGCCCCCAGAGACCAGTGCCTGGAGCCCATCATGGGGCACTGGACTCTGAGTCCCTGCACCCGGGTCTGCTTTCCCAACATTGCCCATCAGCCCCGGCCTCAGAGAGTCCCAGAGTAACCTACTACCTCCCCATCGCTCCCGCTATCCTGGTCACACCCGCCACCCCGTCTGCACGCAGATGAGACCTGCCCCCGAGCCCAGCAGTGAGGCTGTTACCAATGTTTACAATTAGGGGCACCTCCTCTGAGGCGTGTTTACTCCCCCACTCCCAAGGCCACTTGCTGGTCTGAGTTTCATGTCCGTCTGCCCCTTCCCTGGTTGAGGCCGACTTGAACACACAACCCTGATCTTACGTCCCGACCCTCCATCCGTCAAGGCCATGGTGAGGACTGTGTGGGAAGGATATTCCTTGTACATACTCAGCACAGCCCCTAGAGTTTGGACTTGTACTATTGTTCTGTAAAGAGGGTGAAATAGAGCTTATTGTAAAGCGTTGGGAGAAGTATAGTATTGTATTTGTAACAATATGGTTCTTTGTATACACAAAACTCAATCTCTATATATAATTATAAATATATATAAATAAGATATATATACACGTGAGCCTGGAATGTTGATGCCGCACACCCACTGAATGTATTTCCCCTGACAGTCTGGTCACTGGGCTGGCCCACCCTCCCCTCCTCCGTACTGTTTTGGGGGTTGTGATGTATTTAATGTGTTCTCTTCCTTTATTTAACTGAACGCTAATGTCTGTAAGAGTTGCCGCAACAATAAACAAGAACGTCACCTCTTGGCCCTGGCTGAGCGTCTTCATGTTTCAGGGGAGGGACAAGACTGAAAGTGGGG EMBV3_17584 TCTGAGAGCTTCACTACTTGCCTGGTTTGGGACTTTGCAGAGAACCTGATGGACTAGGGG Gene BVV0102_117673 + 0 NULL GK000001.2:96173202-96220226 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25981 TAGGGAGTGGGGACCGAAGTGCCTCATTCAGTAGTTTAGTGATGATGACGGACACGCTTT Gene GeneID:616867|MARVELD1:NM_001101262:243_cdna Constitutive 0 NULL GeneID:616867 26 GENE MARVELD1 NULL MARVEL domain containing 1 EMBV3_26463 CTTCCATTCACACTCTGGGCACTTGTGTTATATTGTTCTGTTACATACTTTTTTTTAAAG Gene BVT0102_324508 + 1 EMBV3_27142 GK000014.2:42189795-42269084 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26281 GTCACGGGGAACGCCAAAAAGCTGGAGGAGGGCCGGATTGTGGTGCCCCGTGGCTGCCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41340 TGTAAGTTGGAAAACAGCTTCACCTGAAAAACGCAACGTGAGAACCAGAGCCTTGCGGGG Gene GeneID:616730|KLF11:XM_002691483:373_cdna UTR3_Alt 2 NULL GeneID:616730 11 GENE KLF11 TIEG2 Kruppel-like factor 11 EMBV3_30197 CCCCGCGACTCCTCCCCCATACACTTAATTTATTTCCGTTTCTGTTCCCTGGTTACTGTG Gene GeneID:528485|NEURL4:XM_002695786:300_cdna Constitutive 0 NULL GeneID:528485 19 GENE NEURL4 NULL neuralized homolog 4 (Drosophila) EMBV3_26262 AAACATGGCTCCACTGAGCGAAATATACCACTGTCTGAAGATGGGACCATGCCCAAGCTG Gene GeneID:511853|TTLL4:XM_002685574:159_cdna Constitutive 0 NULL GeneID:511853 2 GENE TTLL4 NULL tubulin tyrosine ligase-like family, member 4 EMBV3_25915 GGTTCTAAAGTCTGTTGCCTCCAATCACCGGGGGTCCATGATTAATGTAGAAGAAAACTC Gene GeneID:515336|PCDHB11:NM_001103248:232_cdna Constitutive 0 NULL GeneID:515336 7 GENE PCDHB11 MGC148618 protocadherin beta 11 EMBV3_35460 GCTTTAGCTGCTTTGAAGTAAATCTGATAGCTTCCCCAGTGCATAGCCCTTGTCATTTAG Gene BVV0102_168727 - 1 EMBV3_16426 GK000030.2:55038298-55090124 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251086 1 XLOC_154029 NonCoding TCONS_00251086 XLOC_154029 NonCoding NonCoding - X:55040424-55041673 - TSS188307 1249 1 TCONS_00251086_2 60 0.352281825460368 1 0 0 0 0 0 0 0 0 0 6.31716572687585e-06 0 0 0 0 0 0 0.000486362085917531 0.000372187657471135 0.00136603754959706 0 0.000184247981267239 0 4.75302962674325e-05 0.000389291658828964 0.000563743167135527 0 5.64088014947694e-06 9.3821478334025e-06 7.69029210012582e-06 0.000322603914572119 7.22047565162567e-05 0 noncoding GGGAGGGGAGTAAAGGATGACACTTAGTTTTTTGATTCAGCAACTGGGTGAATGCTGGAATGGAGAGATGAGGAACAGATTTGAAGGAGTGTGGAGTCATGAGGGTGTTTTTGGTCATGTTAGTTAGGAGATGCTAAATAGGCAGTTGGATATCCAAATCTAGAATTCAGGGTACATTTTGATTCTGACAATTGATTTGGGAGTCTATTTCATGGCCATGATATTGGATGAGATCACTTAGTACAGCTTGCAAAGAGAAAATGGCAAAGGACTAAACCCTGGAGCATGCAAATATTAAGAAGTAGAGAAGAGGAGGAACCAGCAAGAGACTGAGAAGTACTCACTAGTGAGCTAGAAGAAAAGTTAGAAGACTGATGTGCTGGAAGCCAAGTAAAGAAAATGTTTCAAAAAGGAGGGGATATTTAATGGTATGGAATGTTGCTTACATATACCTGGATAAAAGAAGCTTTAGCTGCTTTGAAGTAAATCTGATAGCTTCCCCAGTGCGTAGCCCTTGTCATTTAGAAAATTTGCTTTTAAGTTCGTACTCCAAGTAACTTCCCATATTGTTTTTCACAACATATTATTTTGGTCCTTAAGATCATGTAGGAGTTTAAATTGTGAGAAGGGGTTTGATTAGTTTTTATGAAAATTTAACCCCTAACAATCTCATATCATGGAAGAAACTTCTCTAAACTTGAGTTTATATTCTGGGAGAAAAAAATTTTTCCCCTTAGTTTGTGTTTTTGTTCAATAATTATTCCCTGGGTACTTCTTTGACCATATTCTTCTTGATCAATTATTTAACACACTTAAAATTAGATATACAGCTGTGCAAATATGCCAAGTCTAGTTATTTGAAAAGTCTTTTGAAGAATGTTCACGGCAAAGAAAAACAAGAAAAACAAAATAAGAGTATTTGCTTGCATGCAAAACATGTCTAAGAAAAGAAATAGAAAGTGTGGTTTGTTTTCCTAATTGTACAAAAAGAATTCCAAGTATTTGTGTAAAATTGCTGATGTTATAAATATTGACTTAATATTCAATAACAATGCTATTAGATTTCCAACATTTTTTTATCATAACTTCTTCGTCTGGTCTTGGGGACAATCTGGAAAGAAAAAATGATAACTATGGTGCCTCATAAACTTTTATTAGCATAGTAGAAATTCTCTTTATATCAGTTACATTTTATCACAAAATAGTTTATTAGAAGAAAAATTATTCTCTAAAATTTATATATATATAT TCONS_00244424 TCONS_00244425 TCONS_00244426 TCONS_00244427 TCONS_00244428 TCONS_00244429 TCONS_00244430 TCONS_00244431 TCONS_00244432 TCONS_00244433 TCONS_00244434 . 3' 2128 TCONS_00244424 TCONS_00244425 TCONS_00244426 TCONS_00244427 TCONS_00244428 TCONS_00244429 TCONS_00244430 TCONS_00244431 TCONS_00244432 TCONS_00244433 TCONS_00244434 . 3' 3376 EMBV3_28744 AGGGGACGGGAGGCCTCGTCCAGACAATCTTAAGGGAAGGAAAAGCCAGACTTCGGTTTT Gene GeneID:526616|TNRC18:XM_002698226:824_cdna Constitutive 1 NULL GeneID:526616 25 GENE TNRC18 NULL trinucleotide repeat containing 18 EMBV3_23099 TCTGAAGAGAATGAAGTAGATGACACTGAGAATTTACAATGGGAATGATTTTACCAACCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37447 TTACAGTTCTGGAGGCTAGAAGGCAGAGATCCAGGTGTTGGCAGGGTTGGTTCCTTCTGA Gene BVV0102_181541 - 1 EMBV3_05434 GK000030.2:34112800-34207610 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32827 TGGTCAGCCTGTACTACAACACCGTCCTGACCTGGGTGCTCTGGTACCTCCTCAACTCCT Gene GeneID:527659|SLC6A18:NM_001102113:29_cdna Constitutive 0 NULL GeneID:527659 20 GENE SLC6A18 MGC179484 solute carrier family 6, member 18 EMBV3_05972 GCCAAGGCATTTCCCTCTGAATGGTTCCTCTTATAGCCCCAAGGACTTTCATGGTTATCC Gene GeneID:511965|HINFP:NM_001038531:104_cdna Constitutive 0 NULL GeneID:511965 15 GENE HINFP MGC133877 MIZF MBD2-interacting zinc finger EMBV3_31153 TGCTCCAGAGATTCCCATCTATAGCCAGCTTGCCTGGACCCAGACTCTCATCCCTGAACT Gene GeneID:511064|FXYD6:NM_001034399:59_cdna Constitutive 0 NULL GeneID:511064 15 GENE FXYD6 MGC129136 FXYD domain containing ion transport regulator 6 EMBV3_32288 AATGCCTCCCAAGCTAAGACCGCTGTAGGAAACATTCGTCACCTGAGTGCCTGTGCACGA Gene BVT0101_005228 + 1 EMBV3_00084 GK000021.2:34651484-34698114 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00055559 TCONS_00220566 TCONS_00250669 TCONS_00198905 TCONS_00238581 TCONS_00210913 TCONS_00174805 TCONS_00171428 TCONS_00206300 TCONS_00165821 TCONS_00174806 TCONS_00226167 TCONS_00219592 TCONS_00118487 TCONS_00125692 TCONS_00250203 TCONS_00123823 TCONS_00001867 TCONS_00118458 TCONS_00001866 TCONS_00174808 TCONS_00174809 TCONS_00206299 TCONS_00218430 TCONS_00246741 TCONS_00174807 TCONS_00232829 TCONS_00001865 21 XLOC_033367 XLOC_133883 XLOC_153612 XLOC_120558 XLOC_145248 XLOC_129423 XLOC_104695 XLOC_103815 XLOC_124877 XLOC_100661 XLOC_137940 XLOC_132911 XLOC_072644 XLOC_077234 XLOC_153146 XLOC_075375 XLOC_000454 XLOC_072622 XLOC_131750 XLOC_151107 XLOC_142312 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_36214 CAGTAAATGAAGACTGCGGTGCACGCCTTGAGCCCCGACTCCCGGCCAGAGACTCAACAT Gene GeneID:615365|LOC615365:XM_002696849:691_cdna Constitutive 0 NULL GeneID:615365 21 GENE LOC615365 NULL hypothetical protein LOC615365 EMBV3_10181 TCGCCGCCTTGGAAAGAGGCTTTCAGGCAGTTGGAGGAGCCGATGGACCTGGCTGTGCTG Variant GeneID:618324|RPAIN:NM_001076500:183_cdna 99^269 1 EMBV3_21557 GeneID:618324 19 GENE RPAIN MGC133584 RPA interacting protein EMBV3_39796 CCTAGGAAAATGTATCCTCTGGGAACCTGCACCCCACCTTGCATCTGCTCATTCTCTGGT Gene GeneID:787439|LOC787439:XM_002685677:466_cdna Constitutive 0 NULL GeneID:787439 2 GENE LOC787439 NULL similar to hCG1777421 EMBV3_06555 GTACCTAAGACCATAACAAGTTGCTTCCCCAGTAAAAGTCATTTCCCTTAACCACAGGGC Gene BVT0102_088833 - 0 NULL GK000020.2:40373065-40965737 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25843 GCAATAGAAAACACTTATCTGCACTTCAGCAGGGCATGGAACAAAGTCTCTACTTCACTC Gene BVT0101_043779 - 1 EMBV3_20487 GK000008.2:102217722-102489019 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226458 1 XLOC_138007 NonCoding TCONS_00226458 XLOC_138007 NonCoding NonCoding - 8:102303412-102305273 - TSS169315 585 0.105982905982906 3 0.687096774193548 9.30302898216531e-05 5.64113020065878e-05 0.000149671134826652 2.83903149821073e-05 0.000118154777405765 0 0.000189405750158838 0.000161769869811973 0 0 0 0 0 0 0 0 0 0 0.000551609158098813 0.000356498153201823 0.000518923656587336 0 0 0 5.92174297990875e-05 0.000457653781238552 0.000420625122405008 0 0 0 0 noncoding 0 0 0 0 -0.0493775831974264 0.749604383609768 0.0122088243646694 0.832950061008755 ACACACAGCTTCAGAAGGCTGATAGCCCCGGGGTGTGTCTCATCTTCTGAGGCAGAACCTACCTGAGTTCTGTCTTTATCTGTTTTAGCTCTCAGGGGCTGTAATTCAGAGACTGCAATTCCACAAAAGAATCCTAAACCCATGTGAAATAACCCTGAAATATCTTGCCCTTTGGGACAGACTTGAGGGCAGGATAAACATATGGCCCAGGTGAACACATGAGAATTGTAGAAAAAAATATCTGAAGCAACTATAACATATTACTAAGTCTGGTTGGACTGTAGAGACCATTAACTGTGTCAAGAGCAGTCACAGAAACCTTAGAAATAAAGCCAGTGCTAAATTCATGTGAACTGTAAAGGCATAAAACATGAAAACATTCATGATAGGATGATCAGAGAAAGGCAATAGAAAACACTTATCTGCACTTCAGCAGGGCATGGAACAAAGTCTCTACTTCACTCAATAAACAACTGTCGAATACTATACTCTGCAAAGCCCACCTTGATATGTAAATAGCCCATTCCATCCATGCTTCATACAGCACACTCACCAGCATCTGCTCACATATTTCCAACAGTGCCC TCONS_00226457 s 3' 79881 TCONS_00226457 s 3' 79881 EMBV3_31607 AGTACAATGATGAAGGCGAGGTGGTGCCCCGGGTAGTGACTCCGGAGATTCGGAAGACGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25077 GGTTTTCTCCATAGTGGCTGTATCAATTTACATTCTCACCAACTGGGCAAGAGGGTTCCC Gene BVV0102_014263 + 1 EMBV3_32292 GK000005.2:22897833-23348067 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18751 TTGAGAATTCCAGACCCCTCTCTCCTTTGGGACCCCTAGACTTCCTATCAACCTGCCTAG Gene BVV0101_016353 - 1 EMBV3_39100 GK000023.2:33570051-34219096 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00118490 TCONS_00250599 TCONS_00012285 TCONS_00040981 TCONS_00061482 TCONS_00125637 TCONS_00219592 TCONS_00165977 TCONS_00118456 TCONS_00111186 TCONS_00145751 TCONS_00250203 TCONS_00233473 TCONS_00031886 TCONS_00246739 TCONS_00087729 TCONS_00196823 TCONS_00211020 TCONS_00174808 TCONS_00223565 TCONS_00118491 TCONS_00115210 TCONS_00232829 TCONS_00174807 TCONS_00132067 TCONS_00061491 TCONS_00173459 TCONS_00145750 TCONS_00072261 TCONS_00055707 TCONS_00174805 TCONS_00056184 TCONS_00023655 TCONS_00061483 TCONS_00171428 TCONS_00204211 TCONS_00251677 TCONS_00207933 TCONS_00174806 TCONS_00059695 TCONS_00188145 TCONS_00161822 TCONS_00118487 TCONS_00232824 TCONS_00160961 TCONS_00251680 TCONS_00002600 TCONS_00229794 TCONS_00199364 TCONS_00207485 TCONS_00099018 TCONS_00031759 TCONS_00209974 TCONS_00198820 TCONS_00206299 TCONS_00000529 TCONS_00246741 TCONS_00170891 TCONS_00103962 TCONS_00251625 TCONS_00246740 TCONS_00061493 TCONS_00061487 TCONS_00118459 TCONS_00220566 TCONS_00118040 TCONS_00061484 TCONS_00210913 TCONS_00239997 TCONS_00204210 TCONS_00019195 TCONS_00010963 TCONS_00061481 TCONS_00124524 TCONS_00252081 TCONS_00166910 TCONS_00216950 TCONS_00241019 TCONS_00001867 TCONS_00174809 TCONS_00162767 TCONS_00018601 TCONS_00132066 TCONS_00022895 TCONS_00118488 TCONS_00107436 TCONS_00078426 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00206300 TCONS_00010280 TCONS_00205125 TCONS_00004603 TCONS_00061489 TCONS_00061496 TCONS_00228562 TCONS_00056149 TCONS_00125692 TCONS_00061488 TCONS_00118489 TCONS_00175330 TCONS_00061494 TCONS_00173458 TCONS_00061495 TCONS_00001866 TCONS_00218901 TCONS_00009619 TCONS_00007850 TCONS_00061486 TCONS_00001865 80 XLOC_105290 XLOC_072622 XLOC_072644 XLOC_153542 XLOC_007831 XLOC_024793 XLOC_036985 XLOC_077179 XLOC_132911 XLOC_100817 XLOC_067086 XLOC_088920 XLOC_153146 XLOC_142955 XLOC_018131 XLOC_151107 XLOC_052579 XLOC_118488 XLOC_129530 XLOC_104695 XLOC_136865 XLOC_069472 XLOC_142312 XLOC_080699 XLOC_104361 XLOC_044030 XLOC_033515 XLOC_033987 XLOC_014322 XLOC_103815 XLOC_124371 XLOC_154618 XLOC_126448 XLOC_036486 XLOC_114188 XLOC_098707 XLOC_142307 XLOC_097854 XLOC_154621 XLOC_000643 XLOC_139288 XLOC_121017 XLOC_126001 XLOC_059261 XLOC_018004 XLOC_128485 XLOC_120473 XLOC_124877 XLOC_000141 XLOC_103679 XLOC_062257 XLOC_154566 XLOC_133883 XLOC_072206 XLOC_129423 XLOC_146662 XLOC_009875 XLOC_006514 XLOC_076070 XLOC_155022 XLOC_101746 XLOC_131385 XLOC_147683 XLOC_000454 XLOC_099648 XLOC_009288 XLOC_013565 XLOC_063346 XLOC_047314 XLOC_148229 XLOC_005831 XLOC_124587 XLOC_001070 XLOC_138526 XLOC_033952 XLOC_077234 XLOC_105112 XLOC_132220 XLOC_005172 XLOC_003410 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_27031 GTGCTGTTCCCTAGCTCTCTCCCTCAATTCCTCCTCCATATTTTAGGCGCGTTTCGCAAA Gene BVT0102_207717 - 1 EMBV3_03531 GK000004.2:38018532-38339063 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33392 CTCAAGTTGTTGACTTTTCAGCCGCTCTCCCATGATAAGAAACTCGAGGGGGACGCTGTT Gene GeneID:511084|ZW10:NM_001075489:62_cdna Constitutive 0 NULL GeneID:511084 15 GENE ZW10 MGC139579 ZW10, kinetochore associated, homolog (Drosophila) EMBV3_15654 GCTTTCTCTACATGTGCTTCCCACTTAACCGCTGTGGCTATATTTCATGGCACACTCCTG Gene GeneID:524282|LOC524282:XM_002693854:29_cdna Constitutive 0 NULL GeneID:524282 16 GENE LOC524282 NULL similar to olfactory receptor Olfr1134 EMBV3_25888 TCAAGATGGAGAAGAAACTTGGAGCTGGGCAGTTTGGGGAAGTCTGGATGGCCACCTACA Gene GeneID:280814|HCK:NM_001037141:698_cdna Constitutive 0 NULL GeneID:280814 13 GENE HCK NULL hemopoietic cell kinase EMBV3_43121 CTCCACACTGGACCCGATGGTCAAGGAGAGGATCTGCGATTTGCTGCAGAAGTTCAAGTA Gene GeneID:506093|LOC506093:XM_002694668:215_cdna Constitutive 0 NULL GeneID:506093 17 GENE LOC506093 NULL similar to glutathione S-transferase, theta 4 EMBV3_02683 CCATTTGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCAC Gene GeneID:100298832|LOC100298832:XM_002692221:1449_cdna Constitutive 0 NULL GeneID:100298832 13 GENE LOC100298832 NULL similar to ubiquitin-conjugating enzyme E2D 3 EMBV3_24628 CCCCATGAGGGCGCATCCTCTTCTCCTGGTTAGTATTTATTTCAGCACCTGGTTAATGCG Gene GeneID:523324|RALBP1:XM_002697745:247_cdna Constitutive 0 NULL GeneID:523324 24 GENE RALBP1 NULL ralA binding protein 1 EMBV3_43611 TTACACCTCAAGCCTACCATGCAGTGCACGTTGAACAGAGGCAGGAGGGCCTGTGGCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01475 ACGAGGGTTACTTCCGGGAGCTCCTGGACTCCATCGACAGCTTGCTGACGGAGCTGAGAT Gene GeneID:520650|SIL1:NM_001075808:235_cdna Constitutive 1 NULL GeneID:520650 7 GENE SIL1 NULL SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae) EMBV3_31931 CTTAGCTAGGCAAGACCCTTCACCTCTCAGGGTTTCACTTCCCCCAATTATCAAAAAGGG Gene BVV0102_239675 - 1 EMBV3_16164 GK000019.2:55981658-56015759 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35038 ACTGTACTTATGAACACTACACGTTCTAAGCTCCCTACCACCACCACCCGAAAACTCTCA Gene GeneID:504457|NSF:XM_002696057:370_cdna Constitutive 0 NULL GeneID:504457 19 GENE NSF MGC139541 N-ethylmaleimide-sensitive factor EMBV3_00382 GAGGACAACAGTGTGGTATCCTTGTCCCAGTATCCAGCCATGCCCTGATGTGAAGTACGG Variant GeneID:507345|VCP:NM_001034294:26_cdna 390^562 1 EMBV3_12330 GeneID:507345 8 GENE VCP MGC128142 p97 valosin-containing protein EMBV3_08454 CATCAAGTACCAGGAGCTCCGGGAGGTGGCTGAGAGCTGTGCAGACAAGCTGCAGCGACT Gene GeneID:539811|VPS37D:XM_002707787:706_cdna Constitutive 0 NULL GeneID:539811 25 GENE VPS37D NULL vacuolar protein sorting 37 homolog D (S. cerevisiae) EMBV3_12183 GGATCCCGAGACAACAAGACCCCCTCACCCAGCAGCAGTGACCAACAGAAGTCCCTCAAT Gene GeneID:516457|DEF6:NM_001098994:38_cdna Constitutive 0 NULL GeneID:516457 23 GENE DEF6 MGC157235 differentially expressed in FDCP 6 homolog (mouse) EMBV3_11581 CGACATCACCTGTAATAATCACCAGAGCATCAGGATTACAAAGCAGCCATGGGCACCACC Gene GeneID:282164|CATHL1:NM_174825:49_cdna Constitutive 0 NULL GeneID:282164 22 GENE CATHL1 MGC140289 cathelicidin 1 EMBV3_40951 AGATCCAGGGATTGAGACATTGTACTTCCAACACAGGGTGTCCAGATTTGATTCCTGGGA Gene BVV0102_065290 + 0 NULL GK000011.2:53464711-54722278 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03944 GCGGGTCCTCTACCATGCGTGCTACCAGGGAAGCCTGTTATAGTCACTACTTTGTTTTAC Gene BVV0102_374815 - 0 NULL GK000020.2:66945641-67146915 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29213 CTGGCTAATGTGTTCCCATCTTTGCTGTTCCGGATGTCAGTCACCAAAGAGTTTAAGATC Gene GeneID:513372|MTHFS:NM_001075616:30_cdna UTR3_Alt 1 NULL GeneID:513372 21 GENE MTHFS NULL 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) EMBV3_38829 TGTACCTCCAAGAGGACCAACAGAGCTGCCCCCTATGCCTGTCACTAAACCTCTTCAGAT Gene GeneID:789395|RC3H1:XM_002694097:375_cdna Constitutive 0 NULL GeneID:789395 16 GENE RC3H1 NULL ring finger and CCCH-type zinc finger domains 1 EMBV3_31763 CTGGTGTAGAGGCCCCTCCAGAGTCCACAGGTGTCTTATCAGAAGAACAGATCCGTCTGA Variant GeneID:507176|NR1H3:NM_001014861:48_cdna 416^682 1 EMBV3_02131 GeneID:507176 15 GENE NR1H3 LXRalpha nuclear receptor subfamily 1, group H, member 3 EMBV3_29636 GTGTGTTAACAACTTCTCAGATTTCGTAGGGGGCCTGTCTTCACTGTTTCATTTTCAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03771 GAGAAGTGGGCAAGGAACGGAGTCCCAGTGCACAGCATGTATTCTTTCAGGTTCTTCACA Gene BVV0102_028663 - 0 NULL GK000016.2:19569757-19573855 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037090 TCONS_00037092 TCONS_00037093 TCONS_00068735 TCONS_00068737 TCONS_00068739 TCONS_00068736 TCONS_00037091 2 XLOC_021294 XLOC_041781 Coding TCONS_00068736 XLOC_041781 Coding Coding USH2A 16:19572376-19589258 j TSS51409 1344 3 TCONS_00068736_4 61 0.0714285714285714 4 0.920620816302352 0.0399528255989336 0.022921624071559 0.0318004070085148 0.0446741426243576 0.0261467415587232 0.00953222514034825 0.0196981255128078 0.0429855283961744 0.0291193454858848 0.00539640775807008 0.00123778677629408 0.00177626621088451 0.00641492845368099 0.0183855381913087 0.00640201570735174 0.000150611769175106 0.000688629878875255 1.04992140715262e-28 0.0410478549387892 0.0544990735346855 0.0165138398364666 7.60302570484958e-30 1.77482902635781e-06 5.10246634343685e-135 0.0367492294454627 0.0379117177004475 0.0244351676831999 0.000558482396535239 0.000910030802396082 0.00212205347245713 XM_005216779.1 USH2A PREDICTED: Bos taurus Usher syndrome 2A (autosomal recessive, mild) (USH2A), transcript variant X1, mRNA. 3e-167 592 100.00 0.243303571428571 NM_206933.2 USH2A Homo sapiens Usher syndrome 2A (autosomal recessive, mild) (USH2A), 6e-107 392 86.77 0.241071428571429 TCONS_00068736_2 sp|O75445|USH2A_HUMAN USH2A_HUMAN Usherin; 2e-27 106 88.89 0.981481481481482 0 coding GTTCCTGAGAACATCTGAGTACAGCAGAGCACCCCGCCCCTGCCTCGCCCACAATTCACTTCTGCTGAGGGTCCTAGACAGAGTGAGGAAGGGAAGGAATAGGAGGCCGGGGCTATGGGCCCAGAGAAGTGGCTCGTAGTAGGCAGGGAGGGTGCTATTTTCAGGTTCTGGAGGGTTCACAGAAGAGAGTGCCGGCAACATTTGCCCGAACCCCATTGAATCACAGTTTAATTCTACCCAGTGGACAAAAGATCCTTGCAATCCTGCTTTTCTCAGACCTTATTGAAACTATTCTCATCAAGTTGGAGACTTGGATGAACATTAGCAAACGTTATTCAAACTAAAGAGAAGACACTTTGCATTAGGAGAGCAGAACCAAGAGCTGAAATAGATGTCCATGGGCTCCAGAATCTGCAGGGCTTAGCTGATACCAAAATCCCCCGGTCTGGGACACCTGTGAGCATTAGGAGCAACCGAAGCCTGTCTGTTCTGCGCATCCCAAGTCAGAGTCACGGCAGTCAGACCTATTCCCAAGGCTCTCTCCACCGGAGTGTCAGCCAACTCATGGACATTCAAGACAAGAAGGTCTTGATAGACGACTCACTGTGGGAAACCATCATGGGCCATGACAGCGGACTGTATGTGGATGAAGAGGACCTGATGAACGCCATCAAGGGTTTCAGCTCTGTGACTAAGGAACACACCACATTCACCGACACCCACCTGTGAAGGATGGAAACCTGTGGTACCCGGTGCCAAGCCTCTACTCAACAGTCAGACTCACCCCTAGATATTCTGATTCAACTGGTCTGGGGTGGCACTGAGGTGTCAGTACTTCTAAAAGCCTCCAGGTGTTCCTCATGTGGAGACCCGGTTTTGTGAAGAACCTGAAAGAATACATGCTGTGCACTGGGACTCCGGTCCTTGCCCACTTCTCCTTTGCAGAGGCGACAGCAGACAGCTCTCTGTACACCTCCTGGCTCTGGTCCCATCACATGCTCAGCTTCATTTTCAAGACCTGCTGTATGGTGTCTAACAGTAACTGATGAGAGCGCACAGCTATGCTTGCGTAAGCTCAACTAAGAACTGCACTTATCGATGATCTGTTGTCATTGCTGCCTGAATGTGAGATCTGTATTGGTACCTTATGCTGACCTAAAAATCATCTTGGCATCAATATAATTCAACCTGAACAACCTGTAAATAAAACGTAGTCCAGGTGGAATAATTCAGTGAGTAGGAACTTAATTATGTCACACGTGAATAGTAGTTTATTTCCAATGCACAGATATCATGTAATTAATCGAAAGGTGGTTTGCTTAATAAATATTTAACTGTGAACCA EMBV3_26292 GTGGGGTGGGGTGGGGGGGAGGTGCCTGCTGTTTATAATGTTGAATTTCTGTAAAATAAA Gene GeneID:616164|CHMP4B:NM_001128506:1306_cdna Constitutive 2 NULL GeneID:616164 13 GENE CHMP4B NULL chromatin modifying protein 4B EMBV3_42516 CCTGGTCCTTGCCGTGTGGGGTGTTCCACCTGCTGCCCTACTTCTACTTCCTCTACTTCA Gene GeneID:282384|TM7SF2:NM_174622:467_cdna Constitutive 1 NULL GeneID:282384 29 GENE TM7SF2 MGC139699 transmembrane 7 superfamily member 2 EMBV3_32844 GGCAGGCCAGAGAACCTTCAGAGGAGTTTGTAGGTTAAAACACTCTTATCACGCCCAGGA Gene BVV0102_094129 - 0 NULL GK000030.2:116422640-117093352 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00010777 TCONS_00176162 TCONS_00073436 TCONS_00065725 TCONS_00054120 TCONS_00085042 TCONS_00192189 TCONS_00081557 TCONS_00066205 TCONS_00238722 TCONS_00201377 TCONS_00192192 TCONS_00089278 TCONS_00192191 TCONS_00048510 TCONS_00184696 TCONS_00129429 TCONS_00184697 TCONS_00251614 TCONS_00220090 TCONS_00048995 TCONS_00060246 TCONS_00199917 TCONS_00252867 TCONS_00135645 TCONS_00132066 TCONS_00189997 TCONS_00250295 TCONS_00030426 TCONS_00135598 TCONS_00037648 TCONS_00167945 TCONS_00037617 TCONS_00022124 TCONS_00230914 TCONS_00251840 TCONS_00184695 TCONS_00200448 TCONS_00037838 TCONS_00192190 TCONS_00015588 TCONS_00129205 TCONS_00034471 TCONS_00143669 TCONS_00000529 TCONS_00060247 40 XLOC_006328 XLOC_105941 XLOC_045201 XLOC_040444 XLOC_031929 XLOC_051775 XLOC_117131 XLOC_050436 XLOC_040919 XLOC_145389 XLOC_123023 XLOC_054063 XLOC_028642 XLOC_111408 XLOC_078142 XLOC_154555 XLOC_133407 XLOC_029126 XLOC_036632 XLOC_121569 XLOC_155808 XLOC_081868 XLOC_080699 XLOC_116032 XLOC_153238 XLOC_016679 XLOC_081821 XLOC_021478 XLOC_102781 XLOC_021447 XLOC_012795 XLOC_140404 XLOC_154781 XLOC_122100 XLOC_021667 XLOC_008519 XLOC_078064 XLOC_020687 XLOC_088090 XLOC_000141 Coding TCONS_00000529 XLOC_000141 Coding Coding - 1:45088092-45096984 - TSS270 8451 4 TCONS_00000529_10 143 0.745473908413206 2 0.0497131931166348 2.01012307707297e-05 1.49871009079085e-05 1.36625311347943e-05 4.53987540290904e-06 1.24531364209072e-05 5.00814608360259e-06 8.46442312822931e-06 1.24185267133133e-05 4.13121620626016e-05 0.001823279532659 0.000814409045036406 0.000443886703423644 0.000426802436486759 0.000631969837416122 0.000420788496196143 0.0164351832051245 0.0118459757916584 0.0133511864103435 1.34853947675417e-05 9.74488686084332e-06 4.71379726774531e-06 0.0113995265993752 0.0116294525732748 0.0115848317310599 2.19528616543606e-05 1.81962347473363e-05 1.11450810621553e-05 0.00508280936174051 0.0025318551055437 0.00742716955264329 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1225 90.86 0.102828067684298 TCONS_00000529_10 sp|Q08DI6|RNF11_BOVIN RNF11_BOVIN RING finger protein 11; 6e-28 104 42.47 0.895104895104895 0 noncoding 1 1 1 1 0.0450297516627036 0.769473730118356 0.00899590186576138 0.845664037517258 TATTTCGAGAAACTGATCCCAATTCTTTATTTTCCATGGTCTACTTTTATACACTGAGATGTTATGCAAAAGTCACATGGGGTCAGCAGTCCTGACTTTTATCAAAGTCAGGTGCTTCATACAAATGTATACAGAGGTCTTAGGGGTATTACATCATCTTCTGGCCAGGGGGCCTGCTGACAATTTATGACCCTCTCCTTATGACAGCGGTCAGTCAACCAGGACACTTATTTCTCCAGGGGTGATTATTCTTAAAAAAGACTCCACCTTCCGAAGGTACCAGATAAAGTTACATTCCTATAGGGTGAGGGTGTAGTGGGTTTTAGTTAAGGAAAGAATTTACTTAACCTAAAGTCTAACGTGATGGTCCAACGTGATTAATATCAAAGGTTAATACTTATTTCTTCTATATATTCATTAATGTGTGTAAGGGCAGGGGATGTGGAGACTTAGCAACAAACATTGGCTCAACAAATGAAAAACCCTTCACCAATACAATTTCTAATCAGCCCACTACTTATACTAATGGTTTTCTAACTTTTCTAAGGAATCTGTTTTTAGAAGGTTTAAAGCATCTCGTGCCTCTCACGGTTGGGAGGCTGTGAGCAATCACTTGTGGCCGGACAAGCCTGTCAGGCAGGCTAGAGAACCTTCAAAGGAGTTTGTAGGTTAAAACACTCTTGTCATGCCCAGGAGTTTTTATTAACTGGAGCTGTAAGTTAATTCCTTCTCCGAAAGAGGTGGTGGGGGACAGCCCCCCGTAAAGTCAGAGGTGTAGGTGAGAGCACAAAGTAGTAAAGTAGGCAGGCTCTGGTTATGGGGGTAGATGCTCGAGGATTTCCAGGGGGACTCCTGAGACTTGATCCCGCCTTTGCGTATGTCGAGCCTCCTTCCTCATGACCTTTGCCATGGGTGGAGGTCCTCACACCGGCTCCCAACAAGAGTGAAATAGTTGGCTTAAAGCTCAACATTCAGAAAATGAAGATCATGGCATCCAGTCCCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAACTAAAAGATGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGACAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCTGTCTAGTTAAGGCTATGGTTTTTCCAATGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGCATTTGACTGATGCTTTTGAACTATGGTATTGGAGAAGACTCTTGAGAGTCCCTTGGACTGTGAGGAGATCCAATTGGAAGGATCTATGTTGGAGCTGAAACTCCAATACTTTGGCCACCTGATGCAAAGCGCTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGAAGGGGACAACAGAGGATGAGATGATTGGATGGCATCACTGACTCAGTGGACATGGGTTTGGGTGGACTCTGGGAGTTGGTGATAGACAGGGAAATCTGGCATGCTGGAGTGAGGTTGGACACGACTGAGCAACTGAACTGAACTGAAAATGAAAAGATCTAGCTTGATTTTTCTTCAAAGGTAATTTATGATTTATTATTTAACCTGTGTCCTATGATTGCCAAATTTTTTAATATTATTGGAAAATAAATGAGTTGAAAAATGACATTACAGGAAGATCAATTATACAACTAGATAATTTATTTCAGGATTCTGCAGTATTTTGAAGCTTGGAGAATATTCTGGTCCTTAGGTACAGCAGCTAAGTGTGATCTGAAGAGACCCACGCCGGATGGTTTTCTCAGACTTAGAGTACGACATGGGGTGCTCCAGAGCCCTGAAAACTGTATCTTTTTACAGCGCCAGCATTTCTCCTTTTGCCATCCTGGCTTGAGAGGATGCTGGTAGCTTAGGTGTTGTCTTGGGAATGAGGAGTAGGATGGTTCTGCTGCTAAGAACTAGTAACAGTCTCTAGCTGCATCAGGACAACACAACCTCACAAAGCAGTGAGGCCACTGGCCACTCACAAAACAGAGATGGCCACTCTGTCTGGCAGACTGAAGGAGCAGAATTCCAGGAAATGCCAGTTTTCCATAATTGTATCATTGCCATGTTCTGTGCCTGGGGGACATACTTTATTAAAGAGGTTGGGTCGATTAGATTTGTTCTGACTGGTATCCAGGTGGGTTACTCAGGTGGCTGCCCTGGATTACCTGCATGATGAGATTATGTGACCCAAGGGGTTCCATACCTGATGAGGTTATATCAATGATGGGGTTAAGCTGCATATAAGAGCTCACCATCTGAAAGGGGCTTAGTTTCTAGAGAGACACTCCGTGGTGACAGTGACCCCAGCAGAGAACTGGCTTTGTCATCTTCTCTATAGATTTGGATCCTGACCTGGGAACCAGGAGGTGTCCTGCAGAGCCGGCTGTCAGCAGCGGACAGGGACCTCACCCCCAGGCCTGAAAGATGGGGAACTGCATCGGCTCCAGCACCGGGGACGACCGGCCGGTCGCTCGGTTTCCGGCCCCCCTCCGAGAGCGCAGAGGCGGAGACGGCCCGGGGGCGGGGGGACCGCGGGGTCCGGAGCGGCGCGGGGCGGGGGCAGCCCCGCCGGGAGCGCCGCTGACCTTCCGTCGAAGGATCCGCCTCATTCAGAGCCCACCTCGAGACGTGTACGGAAGGGATGGATGCGAGACGAAGACCACCGAGTGCGCGGTCTGTCTGATGGACTTGGTGCCCGGGGACCTCATCCGGCCTCTGCCCTGCAAGCATGTGTATCACCTGGACTGCATCAACCAGTGGCTGACCCGGTCCTTCACCTGCCCGCTCTGCCGGGGGCCCGCGGACGCCGCGCAGCCTTTGTTTGAGGACGCTCTTGAGCCCAGACCCCTGGTGTGATTGCAAGGGACCCATCATTTTTACTGATTTCCATGTTCCGTACTGTGCCCAGATAGCCAGGGGTTAGGAATTTAAATCGTGCACAAAGGTTTATTAAAAGTTCCTGGAATGTGGCAGATGTCCGGGAACCGTTTCTAATGTTTTAGAAAGATAGGGAGAAATAGCGGGTGAACCTTGACCAAGTGCTGAGAGGTATAATGACGTCTTAGCATTGTCCTCTTGCTAGAACTGTGCACCCTGTTTCAGCAGCTCTACGTGTTGCATTGCATCTGTTGAACGTCAGGGAAAGATAGTGGTTACTCTTCCTAAATGAAATCAGATTCTTCTCCCCCATCCAACTTAAAAGTTGCTGGCATTTAGGCCACAGTTTTATGAAAAGTTACAATTTATACAACTGAACTAAAATAAAATCAAAGTATGTATGAGTGAATACCTGAAGAATGTTATTCTCAATTGAGCCTTCTAAATGGTCTTATCCGTTTGTTCTCCATCATTTTGAGACCCTTAACCCTTTCCTCTTATAAATCCAAACCAGGTGAACAAAGTGTTCCAGGGAAGAACAGTCCTGAGCAGGTTTATTATCTGTGTAATCAGGGCGTGTCCAGGCACTTTAGCTGTGTTTGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGTGACCCCATGGACTGTAGCCTATCAGGTTCCTCCGTCCATGGGATTTTCCAGGCAAGAGTGCATTGCCGGTTCCTTCTCCGGGGGATCTTCCTGACCCAGAAATCAAACCCGGGTCTCTCACATTGCAGGCAGACGCTTTACCATCTGAGCCACCAGGGAAGCCCAAGGGAAGATAGTTCTCCATTAAACTGGAAGTCAGCCAGCTTCACTCCAGTTCCACTTTACAAGCCTTATCAATTTACATTTTCCTACCAAAGCAAATACTTAAAGTTTGAACTTTCAAAATTTTCTACTTTTTATTTGTCTTTATCTCTTATGGTTGTGAAGAGCTAATTCATTGGAGAAGACCCTGATGCTGGGAAAGATTGAGAGCAAGAGGAGAAGGGGGTGACAGAGGATGAGATGGTTGTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAATAATGAGGTTATATAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCCTCCGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTATACTCCCATAATTAACTTTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTTTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTGCTTCCGAGCTGATAAGGGGCGCTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAATCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGCAAGAACAAAACAACCAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAGAGTACAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTTCTTGAAGTGGGGATGTCCACCACGGGAAGCCTTCCACTGACGAAGAGGGGAGCGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGTCTTGAGGATCCAATGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCACTGCCCTGTGCTTAACTCTAGAGCTCGGGTCAGGGCCACCAGCTCCGCTAACTGAGCACTAGTTTCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGATAGTGGCAGGATTTAAATTTCCACAAACTTTAAGTTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAATGCCGTTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGACCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCGATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATACGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCACAGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAATTTTGTAGATCCCGTGACAAACTTTGTTCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTTGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAATCCTTTCTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGTTCCACATTCATGAAAACAGATGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTCTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCTGGGGGCGGCTTAGATCCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGGGCATTTTTCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGATTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCTTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCGCCAATTTGCCATAGTTTAAAGGCTTAGAACGCGCCTGCCTAAGTCCCTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCATTACCAAGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGTGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCTCTTACTTCGATCTCTTACCCCTTGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCAGGTACGGGGGCAAAGTAAGAGGATAGGAGGGAGCTGAAGAT TCONS_00000526 s 3' 6565 TCONS_00000526 s 3' 6565 EMBV3_33051 CTTGTGGGCTGTTCCATAATTCCATATGCTGTTTCCAAGTCCCGCAAGTACCCCAGCTCT Gene GeneID:532649|ATXN2:XM_002694500:382_cdna Constitutive 0 NULL GeneID:532649 17 GENE ATXN2 NULL ataxin 2 EMBV3_30094 TCTTTGACTGCTTTGATGACATAGGGATCTGGATCCATTTGCAAGGATTGCCTGTGTCTG Variant GeneID:509228|PLAC8:NM_001025325:10_cdna 256^380 2 EMBV3_41904 GeneID:509228 6 GENE PLAC8 MGC140273 placenta-specific 8 EMBV3_40587 TGCTCGGTGACTTCATCTCCTTGAGGCTTTGTAACACGCTGGCCTACGTCGTCAATACCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31068 GATGAATCATCACAAGTACCGCAAGCTGGTCAAGATCTACCTGAAGGGCAAATGAGTCTT Variant GeneID:506359|AURKAIP1:NM_001075255:64_cdna 506^640 2 EMBV3_05504 GeneID:506359 16 GENE AURKAIP1 MGC142346 aurora kinase A interacting protein 1 EMBV3_27977 GGGGCCCTCCTGCAGAGTGAGATCACAAGACACCCTTGTTCAAATATGGGGAGAAAGTGA Gene BVV0102_186435 + 1 EMBV3_30448 GK000029.2:49957636-50027264 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15380 TCTCATTTCCTACTTTCTCCAATCCATGCTATGTACCCACCGGCACCTCCATCCTTACCC Gene BVV0102_386666 + 0 NULL GK000008.2:7423430-7427460 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20264 TATCCTCTCCAGCATCTTCCGCATCCATTCTAAAGAAGGTCGGTCCAAAGCCTTCAGCAC Gene GeneID:512037|LOC512037:XM_002699090:79_cdna Constitutive 0 NULL GeneID:512037 29 GENE LOC512037 NULL similar to olfactory receptor, family 8, subfamily D, member 4 EMBV3_01514 GACAGAATAGCACAAGAAACTGTGGATGAAACTGAAATTGCACAGAGACTCTCCAAAGTC Gene GeneID:535329|BEND5:XM_002686495:599_cdna Constitutive 0 NULL GeneID:535329 3 GENE BEND5 NULL BEN domain containing 5 EMBV3_21248 GATCCTTTTCTTCATCCAGATTCTTAGTTCATAGAACAGTGTGTGGTTTGGAGCACACAG Gene BVT0102_140975 + 0 NULL GK000028.2:41329150-41492639 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160764 TCONS_00160760 TCONS_00160763 TCONS_00160756 TCONS_00160759 TCONS_00160767 TCONS_00160758 TCONS_00160761 TCONS_00160766 TCONS_00160765 TCONS_00160768 TCONS_00160757 TCONS_00160755 1 XLOC_097739 Coding TCONS_00160767 XLOC_097739 Coding Coding WAPAL 28:41490894-41568014 = TSS120143 5995 1 TCONS_00160767_5 1187 19 0.922509368638079 0.00150834174420206 0.0022015450823335 0.00352907711786051 0.00212176083426193 2.17726305692571e-07 0.00031954831918532 0.00122374936112937 0.00137131387054974 0.000359999369140514 5.96165445595833e-08 3.60698054262773e-08 0.000433945603394834 1.31621008447712e-07 0.000467736857802472 0.000791736856233021 0.0139128567624392 1.4241595021211e-07 0.00686398815952163 0.00189586688460179 0.00114007823050045 0.00089627673202096 0.00401418922118015 0.00536170396458836 0.00777067807901918 0.00203126841715587 1.95631633175114e-07 8.06705022484207e-07 0.000893648951846509 0.00131448174118271 0.00257107734473876 XM_005226524.1 WAPAL PREDICTED: Bos taurus wings apart-like homolog (Drosophila) (WAPAL), transcript variant X3, mRNA. 0.0 1.081e+04 100.00 0.999833194328607 NM_015045.2 WAPAL Homo sapiens wings apart-like homolog (Drosophila) (WAPAL), mRNA. 0.0 8495 91.25 0.99883236030025 TCONS_00160767_5 sp|Q7Z5K2|WAPL_HUMAN WAPL_HUMAN Wings apart-like protein homolog; 0.0 2225 94.40 0.999157540016849 1 coding 0 0 0 0 1.21717314660474 0.0299711580118978 -0.0289783078251642 0.560372016937284 ACGGTGGCGGAGCCCCTTGCCTCTCTTCGCTCACCAGCCGGCCCCGTTCTCCCGCGCGGGGCTCCGGCGCCCGCCCGTGGGCCGTTGGGAGCGGGAGAGGCGGAGGCGGCCTGAGGCTAAAGCACCCGCCAGGCGCCGAGGAGAATATGAAACAGGTGTCAAAATGACATCCAGATTTGGGAAAACATACAGTAGGAAAGGAGGAAATGGAAGTTCAAAGTTTGATGAAGTCTTTTCCAACAAACGGACCACCCTTAGCACAAAGTGGGGAGAAACCACATTTATGGCTAAATTAGGACAGAAGAGGCCCAATTTCAAACCAGATATCCAAGAAGTTCCGAAGAAACCTAAGATAGAAGAAGAAAATACTGGAGATCCTTTTGGATTTGATAGTGATGATGAATCTCTACCAGTTTCTTCAAAGAATTTAGCTAAAGGTTCCTCTTACACGGAATCTAGTGAAGCTGCTCAGTTGGAAGAGGTCACATCTGTACTTGAAGCTAATAGCAAAATTAGTCATGTGATGGGTGAAGACAGTGTTGTATCTGATAAATGCTTACGTTTGGAGGATACTTTGCTTGGGAAAGAAAAGAGCACAAACCGTGTCTTAGAAGATGATGCAAGCAGAAGTAGCTGTGCTAAATTAATGACTTCAGATAAAGTGGAGAACTTTAGTGAAGAACATGAAAAGAATAGTCACCATATTTACAAAAATGCTGAAGACAGTACTAAGAAACACAATGCAGAAACTACAGTGGCTTCTGGATACAAAGCTGATGAAATCAAGGAAAATGATACTTGGAATTCCCAACTTGGGAAAAGGTCAGAATCGCCATCAGAAACATCATCAATCAAGGGATCTGTAAGAACTGGTTTATATGAATGGGATAATGATTTTGAAGATAGCAGATCCGAAGATTGTATTTTAAATCTGGATAGTGATCCTCTTTTGGAGATGAAGGATGAGGATTTTAAAAATCGGTTGGAAAATCTAAATGAAGCCATTGAGGAAGACATGATGCAAAGTGTTCTTAGGCCAAGCAACTGTAGGACGTACTGTAGGGCCAATAAAGCAAAATCCTCACAAGGAGCGTCGAGTTTTGATAAGCTAATGGACGGCACCAGTCAGGCCTTAGCCAAAGCAAACAGTGAATCTAGTAAAGATGGCCTGAATCAGGCAAAGAAGGGCAGTGTAAGCTGTGGGACCAGTTTTAGAGGGACGGTTGGACGGACTAGAGATTATACTGTTTTACATCCATCTTGCTTGTCAGTTTGTAATGTTACCATCCAGGATACTATGGAACGCAGCATGGATGAGTTCACTGCTTCAACTCCTGCAGATTTGGGAGAAGCTGGCCGGCTAAGAAAAAAAGCAGATATTGCAACATCTAAGACCACTACTAGATTTCGACCTAGTAATACTAAATCTAAAAAGGATGTTAAACTTGAATTTTTTGGTTTTGAAGATCATGATGAGACAGGAGGTGATGAGGGAGGTTCTGGGAGTTCTAACTACAAAATTAAATATTTTGGCTTTGATGATCTCAGTGAAAGTGAAGATGATGAAGATGATGACTGTCAGGTGGAAAGAAAGACAAGCAAAAAAAGAACTAAAACAGCTCCATCACCCTCCTTGCAGCCTCCTCCAGAAAGCAATGATAATTCCCAGGACAGTCAGTCTAGTTCTAATAATGCAGAGGACTTGCCTGGTGTGCCTGAAAGTGTGAAGAAGCCTCCAAATAAACAAGGAGATAAATCAAAGGAAAATACCAGAAAGATTTTTAGTGGCCCCAAACGGTCTCCTACAAAAGCCGTATATAATGCTAGACATTGGAATCATCCAGACTCGGAAGAACTACCTGCACCACCAGTAGTAAAACCTCAGAGTGTCACAGTGAGGCTGTCTTCAAAGGAGCAAAATCAAAAAGATGATGGAGTTTTTAAGGCTCCTGCACCACCACCCAAAGTGATAAAAACTGTGACAATACCTACTCAGCCCTACCAAGATATAGTTACTGCACTGAAATGCAGAAAAGAAGACAAAGAATTGTATACTGTTGTTCAGCACGTGAAGCACTTCAATGATGTGGTGGAATTTGGTGAAAACCAAGAGTTCACTGATGACATTGAGTACTTGTTAAGTGGCTTAAAGAGCACACAGCCTCTAAACACACGTTGCCTTAGTGTTATTAGCTTGGCTACTAAATGTGCCATGCCCAGTTTTCGAATGCACCTGAGAGCACATGGAATGGTAGCAATGGTCTTTAAAACCTTGGATGATTCCCAGCATCATCAGAATCTGTCCCTTTGTACAGCTGCCCTCATGTACATTCTGAGTAGAGATCGTTTAAACATGGATCTTGATAGAGCTAGCCTAGATCTGATGATTCGACTCCTAGAACTGGAACAAGATGCTTCTTCAGCTAAGCTGCTGAATGAAAAAGACATGAACAAAATCAAAGAAAAAATTCGAAGGCTCTGTGAAACTGTACACAATAAGCACCTTGATCTAGAAAATATAACGACTGGGCATTTAGCTATGGAGACTTTACTGTCCCTTACTTCTAAACGAGCAGGAGACTGGTTTAAAGAAGAACTACGGCTTTTGGGTGGTCTGGATCATATTGTAGATAAAGTGAAAGAATGTGTGGATCATTTAAGTAAAGATGAGGATGAAGAGAAATTAGTAGCCTCATTATGGGGAGCAGAGAGATGTTTACGAGTTTTAGAAAGCGTAACAGTGCATAATCCAGAGAATCAAAGCTACTTGATTGCCTATAAAGATTCACAACTCATTGTTTCGTCAGCTAAGGCATTACAACATTGTGAAGAGCTGATTAAGCAGTATAACCGTGCTGAGAACAGTATATGCTTACCTGACAGTAAGCCTCTGCCTCAGCAGAATGTAACTAACCACGTGGGCAAAGCAGTGGAGGACTGCATGAGGGCCATCATTGGGGTGCTGCTCAACTTAACTAATGATAATGAATGGGGCAGCACCAAAACAGGAGAGCAGGATGGCTTGATTGGCACAGCCATGAATTGTGTGCTTCAGGTTCCAAAGTACCTACCTCAGGAGCAGAGATTTGATATTCGAGTGCTGGGTTTAGGTCTACTGATAAATCTAGTGGAATATAGTGCTCGAAATCGGCACTGTCTTGTCAACATGGAAACATCATGTTCTTTTGATTCTTCCTTCTGTAGTGGAGAAGGAGATGATAGTTTAAGGATAGCTGGACAAGTTCATGCAGTTCAGGCTTTAGTGCAGCTGTTCCTTGAGCGAGAGCGAGCAGCACAGTTGGCAGAAAGTAAAACAGATGAACTGATCAAAGATGCTCCCACCACTCAGCATGACAAGAGTGGGGAGTGGCAGGAGACGAGTGGGGAGATACAGTGGGTGTCAACTGAGAAGGCTGATGGTGCAGAAGAGAAAAATAAGAAGGAGGAGGACGATGAAGAACTTGACCTCAATAAAGCCCTTCAGCATGCTGGCAAGCACATGGAGGATTGCATTGTGGCCTCATACACAGCACTGCTTCTTGGGTGTCTCTGCCAGGAGAGTCCAATCAATGTGACCACTGTGCGGGAGTATCTGCCAGAAGGGGACTTTTCAATAATGACAGAGATGCTCAAAAAATTCCTGAGCTTCATGAATCTTACCTGTGCTGTTGGAACCACGGGCCAGAAGTCCATCTCTAGAGTGATTGAGTACTTGGAACACTGCTAGCTGCTTGACCTTTGCTTCAGGTGCTCGGTAATGCTGGAGCTATACTTAGACAAAGAAAAGTCACGGAAGAAGTCCTTGAAGATAAACCAAGAACATTCATCAGTATCATTCATATTTGGATTTTTAAGGCCACCTGATTTCTTCTTCGTCATGCATTCTGCATTTGCTAAATGACAGTTACTACATCAATCTGCAACTATCAAAAATGAGGGAAAAGGTTCAGGCTGTTAACAGTTCCACGCAGTATTTAAACACACTTTGGCAGAATTGATACTCTCCCCTTGTTCTCTTGCTTTATTCTGGGCAAGTTTAAGGGGAAAACTTGTGCTGCTGTTAGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGCCAGGTGCAAAGGCAGCTTAGCTACTGAGGTATTGAATGTTCTGAGGACATTCTAGACAACAGCTTAGTTCCTTTTTCAGGCTCATTTGCTTTTGCTTTTTTGTTGAATGATTCCAATCGTAAATAAAGCTTTTAATAATTTTGTGAATTTTTTTTGTTGTTGTTCCCTGAACTACTGTCTATATTTAAAATTAGATGGAATCCAAAGACACAAGGGATTAGTATATTTTTTTATTCTTGATTTGGTTTGGGTTGTTGAAGTATTTTTCACCTTTGAGACCATGACCATACTCATTATCATACCATAGTAAGTCATAGCTATAGATGCAAGAAAACAAATAACAGTTTGAGGGAATATAAGATGATGTGCCCTGTTAAAGGATGAAGCAAAATAGACAAACCCAGGGTAGTTTACCCTTAAAGTTAGGGGAGACTCTTGAAACATGATTAAGTTTTGAGGGAGAACTCTCTAGATATATTTTCTAATGTTCAATACAGTAAATATAAGGAAGCTAAAACACCAATGTGGAATTCACATTCCCAGATACCATGTATATTCTTCTATAGGAGTGACAGGATCAAATGCATAAACGCAAAGCCTTAAATTGTTGGTTTAGAGAAGATCCTTTTCTTCATCCAGATTCTTAGTTCATAGAACAGTGTGTGGTTTGGAGCACACAGTAACATATTTTATATATTTAATTTTACAACATTGCAAATTTTTATTGTATTAATTATTGTTCAGACCACTGGTTATACATTTTTTCTTTTACTGATTGGGCCTGAATACAGGCTTTCCAGAGATTTTCATTTAATACTTTAAAATACCTTTCAGGTAGTTATATCATGTTTCTTCATTGGATTTGTAAAACTTGAAGCCATAAAAATATTAGTTTGGTGTGTATTGGGGAAAATAGCTAAAAGTCTAATTTTTACCCACTTAGACTTTGTTATTTCCTTGTATAAAGTGACAAATCGGGGCTCTTGGATCAGTGCCAGCTGTAATGTTTTTAATGCAGTGGCTGCCTTTTATTGTCTTCCTATTTTTGATAATGCAGATTGTTGGGAAATCTATAAGGAAGTAACTGATTTCAGTCAAATTGTTTTCTTCTTCCTCCTCCCCCCGAGCCCCCCACCCGTCACCTTTTAAGAGCATAGTATGCCAGTGTAACTTGAGAAAAGATTGAGGTTGTATTTGCCCTGAGTATACAAGCTAGCTTAGCAAACTATTTTAAATGCTTATTGGTAAATGATATCCATAAAATTGAATTAGTTAAATTATTTTAAAATACACTGATATTTATTAATCATTGGATTTAGGAAAAGGAGGAGATTTTTAGTAAAACTGACTTGTGGCTGAATGGTAAGGGATATTATAAGACATTTGGATAAGAACAATCAGGGCGAACTACATTTTTCTGTTACACTGGTAATCATTTGAGAATTGATTTACCTCAGTGTTTAACAGTTTTTTGTTTTGTTTTGTTTTTTAAATAATAACTAATTGTCAAGCACTGATAGAGATGCAGATTTTGGTGGGGAGTGGTGGGGGAGAAATCACCTCACCAAACGCAGTGCATTTGTGTGTTTTTAACCCTCAGAGAACTCTGCATTTTAGGGTACTTGAGGCTGACTTGCAAATTAACTAAAGTTTTAAAGTAACCTTTTTTTCCATTGTAAATATTTCTGTAAATACTACCAATTGGAAACTAGAAGGTAGAGTACTTTTCTGAATCCAATCCTATTTTTATTTTATACAGTATTTCTCAGCTGTGATCTTTGGAGCAAAAGCCAACGGCAGGAAAAAAATAGTTTGTACCAGTTTCATGAAGTATGTCTTTGGGTTTTTGTAAATAATTTTAACTCAAATAAAATTGCTACTTTCAATACA EMBV3_22998 GAGGTGGAGTTGGGGAAAGACCAGTGTGATCCAGACGTTGAGAGCAAATCTCCCTGAGAA Gene GeneID:509076|ZNRF1:XM_002694709:151_cdna Constitutive 0 NULL GeneID:509076 18 GENE ZNRF1 NULL zinc and ring finger 1 EMBV3_26212 GCTTAGGTTGTCTCATTTCTGTGGGGGAGGTTTCCCTTATCTGAATGTATGTCCAGATTA Gene GeneID:100124428|NCBP1:NM_001102538:2_cdna Constitutive 2 NULL GeneID:100124428 8 GENE NCBP1 MGC139394 nuclear cap binding protein subunit 1, 80kDa EMBV3_22773 GTCCGACGTGGACCAGCGCTGCCTGGACAGGGCCTGTTCAGAGCAGCAGGACACCTGCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12296 CCATGATCGTCTCACACACAAAAGGCCAGATTCGAGCCGGTCACTGGTCAAGAATGGATC Gene BVV0102_381390 + 0 NULL GK000012.2:69663257-69742531 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037176 1 XLOC_021323 Coding TCONS_00037176 XLOC_021323 Coding Coding LOC614121 12:69740967-69754107 = TSS26885 2254 1 TCONS_00037176_1 229 4 0.828754090874496 0.000324448698320397 0.000200612071178933 0.000154660625904973 0.000136314832255794 5.4760089396251e-05 5.89828076052124e-05 0.000181396355791779 2.88650687390286e-05 0.000217027279442403 0.000122759477128651 5.38273549775065e-05 5.00864451845237e-05 0.00015572696063183 0.000307199421216072 2.66641150287117e-05 0.000328094430756094 0 0 0.000408812884401385 0.000181859694191698 0.000259262177243495 4.74133505831175e-12 4.07010886955834e-05 0.000163629873715444 0.00098056086433156 0.000156288118796329 0.00027034201406451 8.30285252187341e-05 1.5507172689694e-05 7.20188904139508e-05 XM_003586723.2 SOX21 PREDICTED: Bos taurus SRY (sex determining region Y)-box 21 (SOX21), mRNA. 0.0 3927 100.00 0.965394853593611 NM_007084.2 SOX21 Homo sapiens SRY (sex determining region Y)-box 21 (SOX21), mRNA. 0.0 2039 85.20 0.790594498669033 TCONS_00037176_1 sp|Q04892|SOX14_MOUSE SOX14_MOUSE Transcription factor SOX-14; 2e-85 258 57.09 0.88646288209607 3 coding 0 0 0 0 ATGAACCGAAGAGTCTACACAGTGCAGAAAGACTTAAACAGTATTCCCATCTTTCTCAAAATCAACCAAAGCAGCATGTCCAAGCCGGTGGACCACGTCAAGCGGCCCATGAACGCCTTCATGGTGTGGTCGCGGGCTCAGCGGCGCAAGATGGCTCAGGAGAACCCCAAGATGCACAACTCGGAGATCAGCAAGCGCCTGGGCGCCGAGTGGAAGCTGCTCACCGAGTCGGAGAAGCGGCCGTTCATCGACGAGGCGAAGCGCCTGCGCGCCATGCACATGAAGGAGCACCCCGACTACAAGTACCGGCCGCGGCGCAAGCCCAAGACACTGCTCAAGAAGGACAAGTTCGCCTTCCCTGTGCCCTACGGCCTGGGCGGCGTGGCCGACGCCGAGCACCCGGCGCTCAAGGCGGGCGCCGGGCTGCACGCGGGCGCGGGCAGCGGCGGCCTGTTGCCCGAGTCGCTGCTCTTCCACGGCGCGGCGGCGGCGGCTGCAGCGGCGGCCGCGGCCGCCGGGGGGCACACGCACTCGCACCCCAGCCCGGGCAACCCGGGATACATGATCCCGTGCAACTGCAGCGCGTGGCCCAGCCCCGGGCTGCAGCCGCCGCTCGCCTACATCCTGTTGCCTGGCATGGGCAAGCCCCAGCTAGACCCCTACCCCGCGGCCTACGCCGCCGCGCTATGACCCCCGAGGGGCGGCCTCGCCGGGACCGATGTGCCCACGTGTACATATGTATAGGTACGAGCTCTGCGGCCTCCCCACGCGCCCTCCCGCGACGGAGGCCCCCCGGTGTGTGTGTACATAAGGTATATAGTTGCCAGTCAGGGCGCGAGTGGCCGAGCGCGCGAGTGCGCGGGCGAGTGTGCGTGTGAATTCGACAGGACCCTTTCAGACCTGCACCCCGCAGACAACTTTCAAGAGGGCAGTTGTATCCGGCAGCGGTGGCTGTTTGCTTTGCACTTCGGAACCTGTTGCGTTTTGGCCCACAGAGGTGGAGGAGTAACTTTTTTTGACTTGTTGGGCTTTCCAGCTTTCTCTGTGGGAAGTTTACTGTCGGTTTTGCTTTTGTTGCCCATTGTTTTTCTTTTATTATTCTTTTCTCCCGGTCTGTGTTGCATGCACTCTGTTCAAACGTTAGGTCTGAAATGGTTGGCACAAGGGAAAAGCTGATCTGTGTCATTAGTTTCTCGGAACGGGATGGCTCCGAGCAGCCTTGCTCCCTATTTGTACTATTTGAACTTTGCAAATATCTGTTCTCTCAAGCAGAACCCCTAGACCGGATCCATTCTTGACCAGTGACCGGCTCGAATCTGGCCTTTTGTGTGTGAGACGATCATGGTTTCTTTTGTTTATCCTGCCATATGCAAATCAGACCAAGAGCTCTTTCTCAAGAGCAAGGACCGCAAACAAGAAATGTGTGTGAAATGAAAAGTTGTCAATTGGATTTTCTCCCTTAAAAAAAAAAATCTACTACAAGTCTCCCTGAGTCCACTTGCTAGAATTTTTGACACAGTTTACACAGAAAAAGGCATTGTTCCTATTTTTTCATTATGGCTGAGTTTCACCTTCAGATGATTGTAAATGTGTATATGTCCGTGAAAGCATTGAGTCTGAAAATGTGTTATTTGCGTTGCCCTAAATTTGAGTCAGTTTGCGACTCTCAAACATTTTGAACAAATGTCAAAGTTAACTTTAAAAATTGCGGGACTATTTCAGACCCGCAATTTTATCTAAGATTAAATCAGACTTTTTTGTCTGAGTGGTAATTATATATTTATTATTTAGCAAAACAAAACAAAAACCAGAATTGTTTTGACAGATGTCTCTTCTTTCAGCTAGCATTTCTCCACCAACTCAAACCGCTTAAATGTGTTTTGGAGTTCCCTCCCTAATTAGCTTATTTTTTAGATCACCTGCAATTCATTTGCAAATGATGATAAAACACATTTTAGAGAAAAGAACCTCATTTGTAGCTTTTTTCTTTTTAAGTGTATATATTTTGACTACTGTTTGTGAATGAAGTTGGCTAACATGTATTTAGTTTCATTTTGGCTTTATGTAATATAAAGTTTTTAAAAGTTTAAGTATTGGTTTTAACCTTTATGTGTAAATGGTTTTTCTTGTGTGATCTTCTAATTTAATATTAGACATCTAAACTATATCTGTAAATTAGAACCCGACTATCACTCTGTTCATTTTTTTTGAACAAAGAGTTTAAATAAAGCCTGAACCAGGGAAAAGAGAAAAT EMBV3_25961 CACTATTTCTGTGACGTGCTTCCCCTGCTCAAACTTGCCTGCTCTGACACCGTCCTCATT Gene GeneID:510901|LOC510901:XM_002693723:442_cdna Constitutive 0 NULL GeneID:510901 15 GENE LOC510901 NULL similar to olfactory receptor MOR228-3 EMBV3_24094 ACGATGCAAAGTCAGAGCAACTTGGTATAGGACCGAATTCCTGGACGGCATTTCCCCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24930 CCCTGGGTGAGGCTTTGTGCTGACTTTGGAGATCACTGTGGGGGCAAGAATACATTGCTT Gene GeneID:531339|HPCAL4:NM_001099382:209_cdna UTR3_Alt 1 NULL GeneID:531339 3 GENE HPCAL4 NULL hippocalcin like 4 EMBV3_28143 TTCGCACAAGTTGGCTGGTCCCTTGCTGGCAGGGCATATTGGCTCAGGATTGCTATTCAT Gene BVV0102_420969 + 0 NULL GK000012.2:77176981-77227237 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09517 TCTGGGGATAAACGAGGTCTGAAGTGCAGCGGTGACAGCCAGCCTCCCCTCTGCCCCACC Variant GeneID:100336252|LOC100336252:XM_002694040:109_cdna 78^410 1 EMBV3_39309 GeneID:100336252 16 GENE LOC100336252 NULL hypothetical protein LOC100336252 EMBV3_01409 GACCTCCAAGAGTCTGTATCCCCAGTCCTGTGTAAGTTCTGTAATCAAATCCCACTGGCC Gene BVT0102_005477 + 1 EMBV3_36571 GK000007.2:34127541-34399500 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129995 TCONS_00175639 TCONS_00250174 TCONS_00109167 TCONS_00056479 5 XLOC_078706 XLOC_105418 XLOC_153117 XLOC_065072 XLOC_034282 NonCoding TCONS_00250174 XLOC_153117 NonCoding NonCoding - X:34618806-34619444 - TSS187395 638 1 TCONS_00250174_1 47 1 0 0 0 0 0 0 5.60666691767233e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.18969067532678e-05 0.00302183849039621 0 0 0 1.88189305712502e-06 0 0 XR_227789.1 LOC100335514 PREDICTED: Bos taurus uncharacterized LOC100335514 (LOC100335514), 1e-85 320 89.67 0.377742946708464 0 noncoding GACCCAGAGACCCTCACAGAGACTGAGCCAGACCTGCCTTTGAGTGTTTGAGTGTCTCCTGTGGAGGCACAGATCAGCAGTGGCCTGTTGCAGGGACAAGGGGTCTGTTGGCAGCAGACCTGGGTCACACAGAATATGATATAAGCATTCATGGAGGAGGTTGCTGTTAGCCCCACCATAGAGCCACCAAGCAGACGACCCACAAACTGCAGAACAATTATAGCAAAGAAACGCTTACACTGTTAAGAAAGCTCTAGGACCCACAACACATTTCCCAACCTGGGGATCTGGCAAAGGGACTGAGAACCCCCAGGGAATTTGACTTTGGAGGCCAGTGGGATTTGATTACAGAACTTCCACAGGACTGGGGAAACAGACTCTTAGAGGGTACAAACAAAACCTTGTGTGAACCAGGAGCTAGGAGAAAGGAGCAGTGACCCGACAAGAGACTGAGCCAGACTTGCCTGTGAGTGTCCAGGAGTCTCTGGTGGAGATATGGGTCAACAGTGGCCTGATACTGGGTCATGGGCACTGAATACAACAGTACACACAAGTCCTTTTGAAGTAATTACAGTCATCACCCCTACCATAGTTTGGCCTCAGGCCAAACAACAGGGAAGGAACACAGCCCCACTCAT TCONS_00244139 . 5' 5746 TCONS_00244139 . 5' 5746 EMBV3_15950 AGTACAGAGTAGAGGTCCACAGCCTCCACAGTCACCCTTCTGAGTTCCCGCTGATGTTAA Gene GeneID:541096|DOPEY1:XM_002690048:13_cdna Constitutive 0 NULL GeneID:541096 9 GENE DOPEY1 NULL dopey family member 1 EMBV3_28194 CTTTTGTGGGAGAGAACAAATGAGAGGCAAGTCTGTGGACAGTGTTTGAAGGGTGCTGGC Gene GeneID:540806|SMAD9:NM_001076928:181_cdna Constitutive 0 NULL GeneID:540806 12 GENE SMAD9 NULL SMAD family member 9 EMBV3_11691 ATATGACTCCCTGTCTGAAATTGACATCCTCAGTGCAGTTCTCTGCCATCCCAAGCAGGG Gene GeneID:100141182|RGAG1:XM_002699895:164_cdna Constitutive 0 NULL GeneID:100141182 X GENE RGAG1 NULL retrotransposon gag domain containing 1 EMBV3_42230 TGGAATGACATCGCTTGTTCCGCCTCCTTTTTGACCGTCTGTGAATTCTCTCTCTGAGGG Gene GeneID:281297|MBL2:NM_174107:10_cdna Constitutive 0 NULL GeneID:281297 26 GENE MBL2 MBL mannose-binding lectin (protein C) 2, soluble (opsonic defect) EMBV3_07810 TCTGTAACTGATGCCCCAGAGTCTACACCACCAGCACCTGCACCCACTTCAGGAATTGTA Gene GeneID:281577|WASL:NM_174219:7_cdna Constitutive 1 NULL GeneID:281577 4 GENE WASL NULL Wiskott-Aldrich syndrome-like EMBV3_40204 CTGGTGTAGAGCACCTAGTCCAGTAACCTGCTGGGTAAACCGTGGATTGCGAAAGACTAA Gene GeneID:281946|NR3C1:XM_002689269:5_cdna Constitutive 0 NULL GeneID:281946 7 GENE NR3C1 GR-A nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) EMBV3_19033 GGTGAACAGAGACTGAGATTTTGGCATCAGTTATCCTGTCATCCAGCCCCCATCCTTAGG Gene BVV0101_058513 + 0 NULL GK000020.2:46424179-46652610 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36606 GAGCTCATTCTTTCCAGGTTAGATATGAAGAGAATTTCAGTGAACTAGTGGATAAGTTAG Gene GeneID:100336816|LOC100336816:XM_002697123:43_cdna Constitutive 0 NULL GeneID:100336816 22 GENE LOC100336816 NULL RAF proto-oncogene serine/threonine-protein kinase-like EMBV3_01230 AGTTGGCTGTGCAGTACACTTTTGTCCTCGAGTTTCTGGCTTCGGAGCTCTTCTCAATGG Gene GeneID:767905|GLIPR1:NM_001076984:23_cdna Constitutive 0 NULL GeneID:767905 5 GENE GLIPR1 MGC127501 GLI pathogenesis-related 1 EMBV3_32675 GCACTCCCCGAGGGGGCGGCCCCCTGCCAGGGCCAGAAGCCAGATGTCTGCCAACTCACA Variant GeneID:615930|IFI30:NM_001101251:119_cdna 138^695 1 EMBV3_27070 GeneID:615930 7 GENE IFI30 NULL gamma-inducible protein 30 EMBV3_15514 TCTGGATTTCGCACTTTCACTCCAAGCCACTTCTGTGTGGCCCACCGCCATTTGAACAAA Gene GeneID:614252|RASL12:NM_001076933:266_cdna UTR3_Alt 2 NULL GeneID:614252 10 GENE RASL12 MGC139757 RAS-like, family 12 EMBV3_21174 GCTCACTTTCAGTTTTGCCTTTGGAATCCACTTCTAGGCCTTGGCTTTGAGGCAGCAGAG Gene BVV0102_105572 + 0 NULL GK000002.2:121383139-121400451 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26327 TATTAGGCTGGAATTGGCAGGTGGAATCCAGGGGCCTTACCATCTACCGGAAGCTACACA Gene GeneID:528282|LOC528282:XM_002695566:87_cdna Constitutive 0 NULL GeneID:528282 19 GENE LOC528282 NULL similar to Phosphatidylcholine transfer protein (PC-TP) (StAR-related lipid transfer protein 2) (StARD2) (START domain-containing protein 2) EMBV3_30323 CGGAACCAGCCCTTTGACTCCTCCACTTCAAGGGATTGGTATGACTGGATACTTGAGCTA Gene GeneID:100297063|LOC100297063:XM_002697871:402_cdna Constitutive 0 NULL GeneID:100297063 25 GENE LOC100297063 NULL hypothetical protein LOC100297063 EMBV3_01307 CATGGACAGAACTAAGGAGGACCAGAATGAAGCCAGCTCTGGATGGGGAAAGATGTTAAG Gene BVT0102_019152 - 1 EMBV3_38405 GK000003.2:51870037-52014637 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00177473 1 XLOC_107247 NonCoding TCONS_00177473 XLOC_107247 NonCoding NonCoding - 3:51932820-51933035 - TSS132232 215 1 0 0 0.000467369141025195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.17710924340112 0.341083817979628 -0.0080980568355408 0.886830071458261 AATCACACCTAGAAGTCTAGTCTTATATCTCCAACTTCCTCCTAAACTTCAGCCTCCCTTCCCTAAACTTAACATCTTTCCCCATCCAGAGCTGGCTTCATTCTGGTCCTCCTTAGTTCTGTCCATGGATCACCACTCTTCTGGCATCACCTGTAATTCTTGCCTTTTCTCCAGACCCCATATCTAGTGCACCTCTGAAGTGTCACTGATTTGTC TCONS_00173391 TCONS_00173392 . 3' 60002 TCONS_00173391 TCONS_00173392 . 3' 60216 EMBV3_19128 GGACACAGCAGCCACTGATACTGATCCGCTAGCCTGTTTCCTTATTCAAGAGAATGAATA Gene GeneID:512922|SPSB4:XM_002685041:109_cdna Constitutive 2 NULL GeneID:512922 1 GENE SPSB4 NULL splA/ryanodine receptor domain and SOCS box containing 4 EMBV3_24900 GTTCTGGGCACTGGGCACCTGTGTGCAGGCTGAGCAAAAGCAGGAAGACATGCTGCTGTA Gene GeneID:100299326|LOC100299326:XM_002686623:153_cdna Constitutive 0 NULL GeneID:100299326 3 GENE LOC100299326 NULL similar to FERM, RhoGEF and pleckstrin domain protein 2 EMBV3_34169 GAGAGATCGCGGCGCTCACGGACTTCTCCGATGAGTTAAAAAACAAAACTGTGTGTGAAG Variant GeneID:516536|C1H21ORF63:XM_002684582:87_cdna 161^481 3 EMBV3_15982 GeneID:516536 1 GENE C1H21ORF63 MGC155009 chromosome 21 open reading frame 63 ortholog EMBV3_23519 AGGGATCAGCATAGTGGTCATATGGGGCAGTTCTGATGTCATAGGATGTTCAGGGGAAAG Gene BVV0102_114395 + 0 NULL GK000007.2:70412518-70448495 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00159404 TCONS_00159413 TCONS_00159406 TCONS_00159394 TCONS_00159407 TCONS_00159395 TCONS_00159405 1 XLOC_097411 Coding TCONS_00159413 XLOC_097411 Coding Coding CDH23 28:27935115-27940442 j TSS119459 1082 1 TCONS_00159413_1 134 0.322550831792976 4 0.797596695456252 0.00218122865655383 0.00210788162749148 0.0048563353349315 0.00187785325180616 0.00173736498964708 0.000262695824107791 0.00122067928210041 0.0029820260250432 0.00268711919643295 0.00381762098209948 9.22476005768823e-284 1.01909134986003e-53 0.000662490968251684 0.00175111740278749 0.000271722761436592 0 0 0 0.00310128550650014 0.00690115639291771 0.00020652102482281 0 0 0 0.000574807363251445 0.00111107659127997 9.54904072132629e-05 7.49943745184776e-145 6.10669972637425e-05 2.00141651552485e-39 NM_001191206.1 CDH23 Bos taurus cadherin-related 23 (CDH23), mRNA. 1e-157 560 100.00 0.285582255083179 NM_023370.3 Cdh23 Mus musculus cadherin 23 (otocadherin) (Cdh23), transcript variant 5e-125 452 92.26 0.285582255083179 TCONS_00159413_1 sp|Q99PF4|CAD23_MOUSE CAD23_MOUSE Cadherin-23; 1e-62 211 99.03 0.761194029850746 1 coding 1 1 1 1 -0.379071835507457 0.332351060718033 -1.25948793664571 0.000681957880231513 ACGGCCTGCCTGCTCTGCTGTGGCTTTGCACTGCCCCAGGGATGGGCGGCGCCTCGGCTCCCGCGTCCCACCAGGACTACAGAGTGTTGTTCTTTGGTCATTCTGGCAGAGTTCACTGGTGTGCGGGCCTGAACAGCATGTTCGAGGTGTACCTGGTGGGGAATAACTCCCACCACTTCATCATCTCCCCGACGTCCGTCCAAGGGAAAGCAGACATTCGCATCCGAGTGGCAATCCCCCTGGACTATGAGACTGTGGACCGCTACGACTTTGACCTCTTTGCCAATGAGAGTGTGCCTGACCACGTGGGCTATGCCAAGGTGAAGATCACCCTCATCAATGAGAATGACAACCGGCCCATCTTCAGCCAGCCACTGTACAATGTCAGCTTGTATGAGAATGTCACTGTGGGGACCTCAGTGCTAACAGTCCTGATGTTTAGCTAGGCAGGCCGTCAGACATAAACAGTAAGTCTGCTGCGGCTGTTTTCTTCCCGGATGCTTCCCCAGCCCGTGGCTCCGCCGGCTTTCACAGAGTTGCTCCTTGCAATCAGTCACCTGGTGCTTGAGGCCCCATGGGCCCTCCTGCAGCCTCTAAGGGCCCCACAGAGAGCAAGGCCAGGGGCTCTGGCCTTCTGGACCCGAAGAAATCCTCTTCATCCCCCCAGCCACCTTCCAATGTCAGGGTGAAGGACACCCAGGCAGCCTGTCTCTCACAGGGCCTGCAGCCATATGGATGTACTGTACCGCAAGGAGAATGAACAAACTGTAGCCACACTGAACATGGATATATCTCACAAAAATATAATACTTCAGGGGGGGCGCTCTACATGAAAGAATACTTTTTGTATGATTCCCTAAGTGTAAAATAGATGCAAAATGGATCTGTAGAAAAAGGGATCAGCATAGTGGTCATATGGGGCAGTTCTGATGTCATAGGATGTTCAGGGGAAAGTTCTGATGTCATAGAATGTTTTGATTCTTCATCTGGGCGCTGGTCACATGGGGTGTGCTCTTTGAAAATTCATAAGACTACACCTGTGACTTGTGTACTTTTCTGCATATTATACTTCAATAAAAAGC EMBV3_32162 CAAGTGAAAAGAATGATACAGTTGGTGGGCAAGGCGACCGGAACCATCTCATCACGAAGC Gene GeneID:281875|ITGAV:NM_174367:4_cdna Constitutive 0 NULL GeneID:281875 2 GENE ITGAV MGC159480 integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) EMBV3_13221 AGAACCATGATTTAAAGGAGGCCCTCATAAGCTACGCAGTCATGCAGATCAGTATGTGCA Gene GeneID:519597|SNX4:NM_001080281:65_cdna UTR3_Alt 2 NULL GeneID:519597 1 GENE SNX4 MGC152099 sorting nexin 4 EMBV3_33099 AGTGCTCTGACCGAATGAAGTGAGAGTTCTTGGAGGAAAGCATGGGCTTCCGAGGTGACT Gene BVV0102_077739 + 1 EMBV3_12124 GK000017.2:55853703-55858839 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12957 ATTCAATCACTCAGGAGAAAGTTTCCAGAGGACGGCGGGATGGCTGCGCAGGGCTCGCCG Variant GeneID:524639|PHOSPHO1:XM_002695905:246_cdna 392^502 2 EMBV3_42084 GeneID:524639 19 GENE PHOSPHO1 NULL phosphatase, orphan 1 EMBV3_39295 ACTGCCAGGTGGAACGCTGCAGGCGGCTAGGTGACTGTAATCAACAAGAGACTGAAGTCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07528 AGCCACATGGGAAGTGAAAGCTGAGAAGGGAAGGCAGATGGGAGAAGCCAATGGGAACTT Gene GeneID:537131|SMG7:XM_002694209:55_cdna Constitutive 3 NULL GeneID:537131 16 GENE SMG7 NULL Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) EMBV3_03107 TCCCAGCCTCAGAGTCTGGCATAATTTCAGGAGAACAAGAGAGTTTTCCAACTTGAGAAA Gene BVT0102_071108 + 0 NULL GK000009.2:65608089-65668666 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00235774 TCONS_00235777 TCONS_00235775 1 XLOC_144297 Coding TCONS_00235777 XLOC_144297 Coding Coding TBX18 9:65591942-65609744 j TSS176635 3473 1 TCONS_00235777_3 345 5 0.805179484298635 1.33389862429179e-105 0.000366971923265605 0.00017959948286293 3.33107619150367e-05 0.00042893830871045 6.07617521288706e-05 0.000155370922016044 0.000115498482616571 0.00056769691551753 0.000157125236700943 2.1842458527521e-17 2.86773711843462e-05 2.20313116298774e-05 3.46216605195806e-05 0.00010079505577696 0.000158960963964493 3.1611576578438e-10 0.000245633816398233 4.09535903508713e-05 3.83392109011262e-20 2.42410549414033e-05 9.50798164829716e-05 6.73068242064246e-05 0.000435597442593288 6.78483185852817e-09 2.01168124232697e-34 0.000292820184887851 4.97816716301848e-05 8.58303349254139e-18 8.07966048388861e-74 NM_001192462.1 TBX18 Bos taurus T-box 18 (TBX18), mRNA. 0.0 2964 100.00 0.472790095018716 NM_001080508.2 TBX18 Homo sapiens T-box 18 (TBX18), mRNA. 0.0 3052 80.60 0.949323351569249 TCONS_00235777_3 sp|O95935|TBX18_HUMAN TBX18_HUMAN T-box transcription factor TBX18; 0.0 686 96.81 0.997101449275362 1 coding 0 0 0 0 0.016939466664629 0.90802986000193 0.0596203809567532 0.223210244824826 ATCATTGGGCAGAAGGCAGTTGAACCATATCATCAGATTCCCCGAGCTGAGTCTGAGAGCTTTTTCATCCCCGGACATCTGGGTTTTGGAAGCCTTGTTGTGATGGAAGCACGAATGCTGGGCTTTCCAGGCAAACCAGAGACTTTGTGAACCACTCATAAGGCAGACCCTGGGATTATACTTCATTCTATGCACAAATACCAACCGCGAGTCCACATCATCCGTAAAGACTGTGGGGATGATCTTTCTCCTATCAAGCCTGTTCCATCTGGAGAGGGAGTGAAGGCATTTTCCTTTCCAGAAACTGTTTTCACCACTGTCACCGCCTATCAGAACCAACAGATTACTCGCCTGAAGATAGATAGGAATCCCTTTGCCAAAGGCTTCCGAGACTCCGGGCGTAATAGAATGGGTTTGGAAGCTCTTGTGGAGTCATATGCATTCTGGAGACCTTCACTACGGACCCTCACCTTTGAAGATATCCCTGGAATTCCCAAGCAAGGAAATACAGGTTCCTCTACCTTACTCCAAGGTTCTGGGAATGGTGTTGCAGCCACCCACCCTCATCTTTTGTCCGGCTCCCCTTGCTCATCTCCTGCCTTCCATCTGGGACCCAACACCAGCCAGCTGTGTGGTCTGGCCCCAGCTGACTATTCCGCCTGCGCCCGCTCTGGCCTCACCCTCAACCGATACAGCACATCCTTGGCTGAGACCTACAACAGGCTCACCAACCAGACAGGGGAGACGTTCGCCCCTCCCAGGACTCCCTCCTACGTGGGCGTCAGCAGCAGTGCCTCGGTGAACATGTCCATGGGCGGCACGGATGGGGACACCTTCAGCTGCCCACAGACCAGCTTGTCCATGCAGATTTCAGGGATGTCTCCCCAGCTCCAGTACATCATGCCTTCACCCCCCAGCAACGCCTTTGCTGCTAACCAGACCCACCAGGGTTCCTACAACACGTTCAGATTACACAGCCCCTGTGCCTTGTATGGGTATAACTTCTCCACATCCCCTAAACTGGCTGCCAGTCCTGAGAAAATTGTTTCTTCCCAAGGAAGTTTCTTGGGGTCCTCACCAAGTGGGACCATGACGGATCGGCAGATGTTGCCCCCCGTGGAAGGCGTGCACCTGCTTAGCAGTGGGGGTCAGCAGAGTTTCTTTGACTCTAGGACCCTAGGAAGCTTAACTCTCTCATCATCTCAAGTATCTGCACATATGGTCTGATGAAGCCTTTAAGTTAAACTGCATTCAAATCCAGCTAATGTATTTTCTTTCTTTGTTTTCTTTTACTATTTTTTCTTTCACTTTGGAAAGCAATATGAAAAGAAACTTATCAAGTAGCTTGTAAAATGTATATATAATAGAAAATGAAGGCTCACTGAGGTTTTTGACTTCCTCATGGTGAGATTGTGATTAGCTATGGTATATATGTATACTGTATGTGGCATGTGGAGTTTGCAGCCTACAAAACCACATCCTCCCTCTATTTTTCTCCCCAGTTGCACAGAGTATTGGCATCATGTAGTATGTTTAACCAAAGTTCTTATACTTAAAAAAAAAAAAAACAAACAGCAAACTTAAAACTTGGCAATGATACTAACCAGACTAAGACGTATAACTTAATTTATCAGGAAAATGCTCTACACAGTTTCCTACTTGAGTGTTGATAACCAGCAGTAACCAGCACACAGAGTCTTGCAATTTGTTATTCTTGGGCACAGTGTGAGAACCTAAGATGCAAAAGCCAGTTGAAGTCTCAGTAATAGTTCTGAGGTATTTGTAATCATGAAGGATTAGCTTTTGTGTTCCTGCTTGCTCTTGTTTATCACGTCTATTAGGTGACTTTGGTCCTGTAAAAATTCATAATCCATAATAATTATTTCCCTAAAAAAGATAGAGAGGCTTGTAATTTTTTCACTTTCCATCGGACATATAAGAGGTATTTATTCATATGCAGAGAATAAATTTCCAGTGTTTTGGACTTTCCTGGTTCATTTTATTTAGTATCAAGTAGACCAATAAATATTTTAAATTCTAGTTTTCACCAGAAAAGGAATATATGCTATGACTGAAATGGCAAAAAGAAAATAAATCCACCTCAAATACTTTAATTCCAATGAAAAATGTCTTAACTTTTTAAATCAAGAGGAATAATATTTTCTGCTTTCCCTTAGGTTTTTATAGTGTGTTTTTTTTCATTCAGGTTTCTTTTTCCATCTTGCTTTGAGATTCCTGACCCATGATCTAGAAGTAAAAAGAAAAGGCATTTACACTACTTATTTATGTCTCGAAAATTCCTGCAAATCGAAACCTCTCCCCTCCCTGAACCTTGTCCCTTTGTCTGAGTCTTTTTCAAAACAGATAGATTCTAGGCCTTCATGGTGTTAAATAGCGCTGTAAGGAATTTCAGGGGGTTATCTCCAGCAATCTGTCTTTTAGGGGTTGCAGTGCAAAGGCCAAAACCCATTACTATAAAGTCCTTCTTGGAAGACTAAGGAGGAAGATACCAATTATGATAAAGGAGCTGTAAAACTTTTAACCTCAACATCATTTTTAGCCTTGAAACTGAAAAAAAAAAAAAGAAAAAGATTATTTTTAAAAAATTCCCCCAAATAATGTGCACATGGTTTCAAAACAAGTAGTAACTTTGATAGCACAAAATGAGATTAATAGGAAAAATTAAGAATGCAAGATGAGCATTACCATATATTTGTTGAGAATAAAATTATGTGTCTGGACATTGACTCATTACGTTTCATATATTTGTCAAGCGAAAGCAGTGGAGTTTCCTTTCAGTGCTAAACAGAATGGCATTGTCCTATCCTTAGTTTGATGGGGAAAGAATGTAGTTCCTGATTTGCTTCTTTACCTTAAAACAGCATGGATGTTATATATTTAGGGGGATTACTATTTGAACAGTATTTTCACACAATGTGACTCTGTTTATACATACTGATAAATTTCTTCATGGATGCTCTAACAGTTCATCAAGTGAGTATTGATCTTTAAATTTAAAATTAGTGTGAAGGTACATGACATATTTCCAGTAAGTAGATCTATGTAACATGTTTGTGTATGGTATTAATAGATAAAGATTTGGGAAAAGTCCTTATTATGAACATATCCCAGCCTCAGAGTCTGGCATAATTTCAGGAGAACAAGAGAGTTTTCCAACTTGAGAAAACATGGAAAGTAATGATCTATTCCTATATATATATTAATAAGATGAGAATTTTCCTTTCTGCTCTTTGTGATTTGAGATGACACCACAATATGAGGAGAATTTTTAATCTTTTCCTTTTGATCAGCAATATTGTACAAGTGCTATTTCCTTTAGGTTTTACTGTAAATATTAATCATCATGTCACTTCAAAGACTAGCCTTTTATCATTATATTAAATGACATACATGCATTGATAATTATAATTATATATCTGTATTTTATTAAAAAATGCTTAAGAAATTATATA EMBV3_21070 AGAGATCTGAGAAAGGATCAGGACGGGCGGGCATTTTCCCTTTTCGTTAAAACTAAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28241 GGCCTTCTGCGCCTCACCCTGACTGGCCTCTTCTGTCTCTAACTATAACTGCACTCTTAA Gene BVV0102_142867 + 1 EMBV3_09743 GK000030.2:58706140-58826555 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251263 1 XLOC_154206 NonCoding TCONS_00251263 XLOC_154206 NonCoding NonCoding - X:58820841-58822156 - TSS188484 1315 3 TCONS_00251263_3 93 0.975665399239544 1 0 0 0 0 0 0 0 1.33043177520942e-05 0 0 0 5.22249209371876e-06 0 0 0 0 0.00142602640785047 0.00784664333013115 0.00438693084419108 1.09063545141041e-05 5.46876578363604e-06 0 7.33601879704061e-05 0.000655787114804159 0.000924285503414181 3.24910499878957e-05 0 1.11390720007761e-06 1.46086260543344e-05 5.16840096366961e-05 0.000953272506172654 XR_228718.1 LOC100851952 PREDICTED: Bos taurus uncharacterized LOC100851952 (LOC100851952), 0.0 832 83.87 0.584790874524715 0 noncoding 0 0 0 0 -0.0290090925199228 0.786088261122157 -0.0284405825274482 0.674201135840125 TAGAACAAGTGTCTTAAGACATTAAACTGCCTTTGCAAAAAAAATATGTTTCTATCCCATTACCCACTGAAGTCGTCACCTGGGTACACCTCTCTCACCTCACCTCTGATCCTGTGCTGCCCTCCTTAACTGGCCCATATCAGGTCTCTCTCACAGGGCCTACCTCCTTAAAAATCACCCGGTGACAACCTCTGTCGACCATCCAAGAAGACACTGAATGACCTGGACACTCTTCAAACTACAGCTATTTCTGACCCAACTACTACAAGACCTCTGGACCAGCACCCTGTCAGGAACCTCCTTCGAAGACCTGGCCATGCTGGTGTCTCAACTGTGGCTTCAGGGAACCTTCTACAACCTGACTCCAGACGAAATTGGTTTCTTTACTCTAATTCTCTACATCATTCTACATCCTAATGAACACTGTTCCTCCTCAGATTCAAGCAACCTCCAACTTGGGGCCTTCTGCGCCTCACCCTGACTGGCCTCTTCTGTCTCTAACTATAACTGCACTCTTAATCTTAGTCCTTGCTATAGGCCTAGTAACTATCTCCCCTCAGGACTGGTCACTTATCCTTTGTCTTTCCATTGGTATCACCTAGGTTGTTAGCTGTGTTCTACTCCTAGGGTACTATTTCCTCTGCACTGCCTAACTAACAGAACCATGACTCCTCTGTTCCTTATCCTTGCTGTGCTCCCCAGCCTTCTGGCTAGTCCCTGCCCTTGCTCAGACATTTATTCCTATGTTCATTCCTCATGTTATAATACAGCTCCAAGACCATGCACCATGAACCTGGGGGAGAGGGGAAAGTCCAAACCCCTACTCACTGTTAAAGTACAAAAGAGAGGAAGTTTCATGAGCACCTGCCATAAGCCAAATGGAAAACAATGTTTCTATCCCATTACCCACTGGGGGTACTCAGATGGGGGTGGGATACTAGATTAAAATCAGAAAAAAAAGTTATAAAGAACTTAATTTCCCAGTTACAGGCGACCCCTGAGCCTTACAAACACCTAGACCTCCTTTCCCAATTACAACCTCTCATGAAACCTCCCTCTGATAACCAACACCTTACCTGCCTTCTCAACTCTTCTAATTCTTCCAGTACACGCAACACACATCCCAGTGTTGGATATGCATGTCACAGTCTCCTTCACCATACATAGCAATTCCCTTACCCTCAACATGGCTGTCACAGGACAACTATACCTTCCCTTCCCAACAAAAAACCACACAACTTATTGGGCCAGTGTCTGACAATGTCCTACTCTCAGCCTCTTCAAACCCAACCTGTATCAACTACTCTAGTCCCAA TCONS_00244505 . 5' 4400 TCONS_00244505 . 5' 4400 EMBV3_16189 CGACCAGAGGCTCGAGGCCTCTCCCCTGGGCTGCCCCTTGGCAGTAAAGTGGTAGTCCTG Variant GeneID:507484|SPINT2:NM_001045971:556_cdna 312^897 1 EMBV3_12549 GeneID:507484 18 GENE SPINT2 MGC129087 serine peptidase inhibitor, Kunitz type, 2 EMBV3_37903 CACTTCACCAAGGACCTGGAGACGCTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTT Gene GeneID:617775|MGC139265:NM_001083780:424_cdna Constitutive 0 NULL GeneID:617775 18 GENE MGC139265 NULL similar to Prostate tumor over expressed gene 1 EMBV3_22719 TCTCGCTCTGTCTGCATCCCAGACCTCACTGAAAGCTGGCTGACAGCCGACCTTGTCCAC Gene GeneID:788526|TCERG1L:XM_002698497:586_cdna Constitutive 0 NULL GeneID:788526 26 GENE TCERG1L NULL transcription elongation regulator 1-like EMBV3_27828 ACGTTCTCGTCACACTGGGTGAGAAGATGACAGATTCTCTTTCTTGGATGATGTCTGCCA Variant GeneID:281341|MYL6:NM_175780:893_cdna 392^627 10 EMBV3_24632 GeneID:281341 5 GENE MYL6 MGC127726 myosin, light chain 6, alkali, smooth muscle and non-muscle EMBV3_14629 AAGAGAGAGAACTGGGTGGGCCCTGCGGGATAAAACATGCAGCAAAGAAGCCTTGGCACC Gene BVV0102_359535 - 1 EMBV3_31905 GK000025.2:13339566-13344233 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31657 CTTTGAGGAACTGGAGCGAATTCCACTCAGCGACATGACCCGCGAGGAGATCAACGCGCT Gene GeneID:787736|SELM:NM_001163171:80_cdna Constitutive 0 NULL GeneID:787736 17 GENE SELM NULL selenoprotein M EMBV3_00827 CAGCCAAACAGCAGGAAGTCCAGTTCAAAGAGTGAGGTGGAAGAAATTGAGCAGCACAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22373 CCGTGGATTACCCTAAGGACTACCTGTCTCACCAGGTTCCCGTGTCTTTCCACAAGCACT Gene GeneID:509511|B3GALTL:XM_002691759:297_cdna Constitutive 0 NULL GeneID:509511 12 GENE B3GALTL NULL beta 1,3-galactosyltransferase-like EMBV3_21783 AGCTTACTTCAGGCTTCAGGTTTGCTGGGGAGATGCTGCTTCACTGATGCCATTTCACTG Gene BVV0102_033925 + 0 NULL GK000006.2:27939191-28075089 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204789 TCONS_00204787 TCONS_00204788 1 XLOC_124523 NonCoding TCONS_00204789 XLOC_124523 NonCoding NonCoding - 6:27958634-27960276 - TSS153113 1101 4 TCONS_00204789_4 40 0.518619436875568 3 0.330895795246801 0.000795233190777856 0.000328154947214125 0.00100629668573831 0.000120047635979382 2.89697614866108e-05 1.10226590918488e-05 0.000525684760785303 0.000419323615268871 5.98042826095822e-05 0 0 0 0 0 0 0 0 0 0.000908658150334911 0.00154266432893485 5.44792856849608e-05 0 0 0 0.00106955125995306 0.00109497208652074 0.000800575168268115 0 4.40885198739872e-06 0 XM_005223069.1 CCR9 PREDICTED: Bos taurus chemokine (C-C motif) receptor 9 (CCR9), 3e-96 356 81.55 0.329700272479564 0 noncoding 0 0 1 1 -0.12463022512012 0.328931988591857 -0.00449228870423488 0.932952948257684 CCCCAGACCCAAGGGTTTTTGTTTTTTTTTTGGAGCTCCTGAGCCACTAGCATCAGCTGAGCTGCGCATCCGCTTCACAAACTTAAATCACCTTAAAAGCTAGCCCCCTCCCACCGCTCCTAAGAGCGACCCCAGTGAAATGGCATCAGTGAAGCAGCATCTCCCCAGCAAACCTGAAGCCTGAAGTAAGCTGCTCTAGCAGACCCGCAAACTTGTCGGCTCTATCATAAAGCTGAAGAACCGATACTTTCGAGTCGCAATGCTGCAGATTATCAAGAGTCCCTTGGTCGGCAAAGAGATCAAAGCAGTCAATCCTAAAGAAAATCAACCCTGAATATTCATTAGAAGGACTGATGCCGAAGCTCCAATACTTTGGCCATATGATGCAAAGAGCCACGTCATTGGGAAAGACCCTGGGAAAGATGGAGGGCAGGAGGAGAAGGGAGTAAGAGAGGATGAGATGGTTGGATAGCATCACCGACTCAATGGACATGAATTTGAGCAAACTCTGGGAGATAGTGGAGGACAGAGGAGCCTGGCAGGCTGCAGTCCATGCAGTCACAAAGAGTCGGAGATGACTTAGCAATTGAACAGCAACAAATAAAGCCATGGCCCCCACAACTATTGTCTCTGAAATGAGCTTCAAGAAATGCTTCCAAAGTAAAAAGCTGAACATTTATTCTTTCTGCTGCTTTGCATTCCTGACACAGCAATACCATGCAAGATAGAGGGTGCCTCTGGTTGCAGAAGGTGAATGTCACAAGGAAATATAAAAAGCAAAAGATATTACCATATTTTAATATATTCTCATTATTACTATAAAAAGATGAAAAGAGAGTACAGGCTTTGAAACGGTATTTACTTAGCTTTGAGCCATAACCCTGCCATTCACAATTTTTATAGCTAACTTACTTATAGCTTACTATGGGTAACACAAGGAAATGGGTGTTGCTCGCAGTAAAACACTTAGTTCTTACTATGACTCCATCAGGTATGCCTACTTATTATCACTATTTAACATTTGAAAAAATAGATTTAGAGACTTGAAAAGCATACCCCTGATGCCAAAGCACTTGCTCTTAAACTTTATTCTGGGATGAT TCONS_00202889 TCONS_00202890 TCONS_00202891 TCONS_00202892 TCONS_00202893 r 3' 6458 TCONS_00202889 TCONS_00202890 TCONS_00202891 TCONS_00202892 TCONS_00202893 r 3' 7340 EMBV3_16674 ACAGCACTGGTTACAGGTCCATGGCTCGAGATATAAGTCCTGATCTTCAAACTAAATAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19840 GACTATGGTCATGGAGTAAGTGAGGATGCCTATGACAGCTACGCACCAGAAGAATGGGCC Gene GeneID:789972|KHDRBS2:XM_002697166:182_cdna Constitutive 0 NULL GeneID:789972 23 GENE KHDRBS2 NULL KH domain containing, RNA binding, signal transduction associated 2 EMBV3_19210 GCTGCAGTCCATGGAGTCACAGATTCAGACATGACTGGGTGACGGAATAGCAGCAACAAC Gene BVV0102_066179 + 0 NULL GK000011.2:51092118-53464028 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15695 GTCCAGGATTGAGGTAGACACAGCTTTCATGAGGTTAGAGAGAAGGGCTCCAGACTTAGG Gene BVT0101_002895 + 0 NULL GK000010.2:84414143-84501206 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00022719 1 XLOC_013389 NonCoding TCONS_00022719 XLOC_013389 NonCoding NonCoding - 10:84490447-84492456 - TSS16609 2009 1 TCONS_00022719_1 135 0.0333499253359881 1 0 0 0 0 0 0 0 1.74167509192599e-05 0 0 0 0 0 0 0 0 0.000473278940975148 0 0.000399655875177307 0 3.93756415887417e-05 0 0.000539282092825243 0 1.66895230876636e-05 0 0 0 0 0 0 XM_005212108.1 DPF3 PREDICTED: Bos taurus D4, zinc and double PHD fingers, family 3 (DPF3), transcript variant X2, mRNA. 0.0 3624 100.00 0.999502239920358 0 noncoding 0 0 0 0 -0.0392952479891428 0.814703998957581 -0.0414104052438382 0.660109800876705 GAGTTTTAAAACCTTTTATTTGTTTACACATTCTCTAAATTGCAGACAAAAAGATTCACTACATAGATCGTCAACACTGCTAACCAACCACAGAACAAGATACAACCACAGCAAGTAAGGGACATGGCCTGTGACTCAGTCTTTGTGGAGGTTCAAGGGCTCCATGGAGGGGCTGGGATGTCCAGGGGTCCCCAAGATAAAGGCTGCTCAATGCCCACTTCCCATTGGCTACGGGACTTGACCTCTCCTTGGCGCCTCTCCCAGAAGCCAGGTCAGGAGAGGAGGAAGGCAAGGGGAGAGGGCAGCATCCTGGCTCACAGGCAGCCCTCCCAATGGCCCTCTTCTGAAGGAAGCAGTGGACCCGGCTTCTGGACAAGTCCTTGCCAGTGGATCCAATTCCAGGTGTGGGGTGCTTCCCACCTGGAGATCCTCCTGGACGCTCACAGTACACCCACTCTCTGGGAAGTCACAGAACCTGCGTGTCCTCTTAGGACACTGGGAGATGTAGCACAGCCTCATCTCCAATACTGAAACACTGAGAGATGTTGTAATATCCCTCAGACAGGGCAGAAACATCACAGCACTGTTCACAGCAGGAGCCACGAGAGTGGGAACTTAACACACAGGAGAAAGGAGCACCCCCAGAAGACAGAGGAGCAGAGTGGGGCACACACATCTACGGCTGAGACGACAATCACATCACACCTGAAAGAGGCTGTGGGGTGGGAGAATGGGGGCTTTTGTCTGTCTGTTGCTGTGGTGGCTTTTTAGAGGTGCCAACGGAGATCTCCTCGGCCCATTGCAACTTCCTAAGTCTGGAGCCCTTCTCTCTAACCTCATGAAAGCTGTGTCTACCTCAATCCTGGACATTGTCTGAGGTACTCAAGTGGCTCAAGGCTGGACAACTCTAAGTTCTCCCATCAAGCAGGAGGTAATGGGTGTTGGATCCCAAGGTCCAATGAGGAGGGAGTTCAAGGGAGCATAAAAGGAAGACCTTTGTTAGCAGGCATTCCTGTTGCTGGAGGTTAACTCTCTTGGCCATTCATTTATGACTAAGAGTTTTGCAAAGAGTTGAGGCAGGGTGAGTAGAAGAGTAGGGCTTCCCAGATGGCTCTAGTGGTAAAGAACCCACCTACCAACTCAGGAGATGTAAGAGATGCGGGTAGAAGAGACTAGAAGGCATTTTGGAATAATGGGCATACACTGTGAAAATGGCCTCCTCTCTTGTGACCACACCTGAAGAAGTGACACCCAGTTTGCCTCTTATCTGTGGGTCTAGAGGTCCAAATGGACCCTTGGCAATTGGAGGTCATTGGAACATCTCCAGGGGCCACCTTTCCAACCACAGCCCAGAGCAATCCGAGGATGGTAAATTCCTGAAGCTGTGAGGCACAAGGGTCTCTTCACCAGCTGGGTCAGGCAGTGTGAAAGCTCGAGGAACCCCTTCCCAGGCTCCTCACGCTCTCTCTTCCACCAGAGCCTGCACAGGCCTGAGCCTCCTCCCACGACACTGGGGCCAGTGTCCCCTCCTGTGGGACCCCCTTCAGCCTTCCTACCCCTGGGGCCACAGCTTATCCAGAGGAATCCCAGGAAGACATCAAAGCTGCCACAATCAGCCTCTCTCTGAGGAGAAACATAGTGGGACTTCAGGCAGCTAGAAGAAAATCAATTTATCTTCGTTTCCTGGCAGAGATATTCCATTTCTTGGCTCTCAAAGGGGAATGTCATCAAAACTGGGCTTTAAAACTGCCCTCGATCTAAACACATTTGGAAAGCGAGATGCAGACCCAATTGAGGACTTGTTGTGACTCTTAATCCAGTGGACTGTGTGATGTGGATGGGACGGTCCCTCCCCCAGACTTCCACTTCCTAATTGGCCCAGTGGGTCACCCTCAGACTGGGAATGGGTCTGAGCAGACTGTATTCTCAGCCTGAGAGTAGACTTGAGTAGAAGAGGAGGGAAGACCATCTCGGGGCTCAGCCCACTGGGCCAGCAGTGTCCACCCTTC TCONS_00018132 TCONS_00018133 TCONS_00018134 TCONS_00018135 TCONS_00018136 . 3' 8317 TCONS_00018132 TCONS_00018133 TCONS_00018134 TCONS_00018135 TCONS_00018136 . 3' 10325 EMBV3_31661 CTTTAGTCTCATCTATCTCCGCTGATCCCTCATGTCTGGACACATCTGCTCTCACTTCCC Gene BVT0102_060255 + 1 EMBV3_07807 GK000010.2:90134652-90228804 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023067 1 XLOC_013737 NonCoding TCONS_00023067 XLOC_013737 NonCoding NonCoding - 10:90219678-90219984 - TSS16957 306 0.584967320261438 1 0 0 0 0 0 0.000233950665348606 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000679597145294258 2.35014517348252e-05 0 0 0 0 0 0.000161170796176999 0 0 0 0 0 noncoding 0 0 0 0 0.0452848669849751 0.711496525984946 0.0455929177579963 0.520774520417708 ACTCATAGAGTGTGATGTACAATGTGCTTCATGATTTTTTTTCTTGCTTATTTCTTTAGTCTCATCTATCTCCGCTGATCCCTCATGTCTGGACACATCTGCTCTCACTTCCCTCTTGGTCTAGAATGCTCTTACTCCCCTTCTTCTTCTGACCACTTCTTTGGCATCCACTGAGGCTTCGTTTAGGGATCACTCCTCACAAAGTCTTTCTGGATGTCTAACGCCTCCTCCCAGGATGGTCTAGATGCTCATCCACAGCACCCTGGGAATATCTCTATCCTAGCAATTTGCCAATTTGCATGTCTG TCONS_00015384 TCONS_00015385 TCONS_00015386 TCONS_00015387 TCONS_00015388 TCONS_00015390 . 3' 84140 TCONS_00015384 TCONS_00015385 TCONS_00015386 TCONS_00015387 TCONS_00015388 TCONS_00015390 . 3' 84445 EMBV3_06571 GACCTTGTTCATCCATTCTATATATACTTGCTTGCATCTGCTAACCCCACACTCCCACTC Gene BVT0102_435773 + 0 NULL GK000022.2:14870670-14944372 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09596 AACTGAAGCCCCCTCAACATGAGAGGTTGGTAGAGGATTCTGTAGTGGGATTATGCCTGC Gene BVT0102_250466 + 0 NULL GK000008.2:9499874-9500596 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226876 TCONS_00226865 TCONS_00226875 TCONS_00226874 TCONS_00226871 TCONS_00226877 TCONS_00226868 TCONS_00226866 TCONS_00226873 TCONS_00226881 TCONS_00226869 TCONS_00226878 TCONS_00226883 TCONS_00226880 TCONS_00226882 TCONS_00226870 TCONS_00226867 1 XLOC_138105 Coding TCONS_00226881 XLOC_138105 Coding Coding HMBOX1 8:9499145-9691300 j TSS169503 3814 1 TCONS_00226881_3 406 11 0.980208582699293 0.00422991718947861 0.00318245946779406 0.00415912234427818 0.00366205470907899 0.00310577268368648 0.00105246237467991 0.00340227064285475 0.00311002168757125 0.00372844226541132 0.000393355442701714 8.67451978395795e-46 6.75305224341779e-05 0.000907421887498253 0.00282538326120255 0.00113696808110211 0.000118120369748609 2.39231072740637e-30 1.14571229822355e-17 0.00306760292281732 0.00403053644330607 0.00168605311871048 6.23146566440222e-50 0.000547580538340778 1.84495987059393e-05 0.00305536434864258 0.00299798839026262 0.000993099072960263 9.35201936535241e-05 0.000119068663970925 1.68572575691129e-05 XM_005209861.1 HMBOX1 PREDICTED: Bos taurus homeobox containing 1 (HMBOX1), transcript 0.0 6067 99.04 0.899842684845307 XM_005273639.1 HMBOX1 PREDICTED: Homo sapiens homeobox containing 1 (HMBOX1), transcript 0.0 4598 88.28 0.951756685894074 TCONS_00226881_3 sp|Q6NT76|HMBX1_HUMAN HMBX1_HUMAN Homeobox-containing protein 1; 0.0 788 100.00 0.923645320197044 2 coding 0 0 0 0 -0.0703708521065156 0.744682760083182 -0.106296770488513 0.110349500973609 AGCTGGGCCTGGGCGGAGAGGCGTGCGCGAGGTGCGGCTCTGGGACCTCTGGGCTAGCGGAGCGGCGCGGGGTGGCCGCGGGGAGCAACTCGAATGTGTCCCATCGGCGGCTCACACTCCTCCTCCCCTTCTCCCGGGACCCACCTCCACCCCAAACTCAAGGCAGGCGCCTCGGAGAGATGAGAATGATGAATAACGCTGATCATCTCTAGCAAGGACATTACTTCCCCTCATGTAAAGCATGCTCAGTTCCTTCCCAGTGGTTTTGCTGGAAACCATGTCTCACTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTCCAGCGCCTCCGGCGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTCTGGACCGCCTTGATCAAGAACATAGCGACAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACCAACAATGTTCCAGCATCTTCCTCTACAGCTACAGCTTCCACGCAGACCCAGCATTCGGGCATGTCCCCGTCACCTAGCAATAGTTACGACACCTCCCCACAGCCTTGTACTACCAATCAGAACGGGAGGGAGAATAACGAGCGATTATCCACGTCCAATGGGAAGATGTCACCAACTCGCTACCATGCTAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAGGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGCCAGAGCCGGATCTCTCACTGGTTATTGCAGCAGGGGTCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAGCTTGAAAAGACAAACCCTGGGGCTACGCTAAGTATGAGACCAGCACCCATTCCAATAGAGGACCCGGAGTGGAGACAAACGCCTCCCCCAGTCTCAGCCACGTCTGGCACCTTCCGACTACGGCGAGGCAGTCGATTTACCTGGAGAAAGGAGTGTCTGGCTGTCATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGAGAAGAAATTGCAAATGCTTGCAACGCAGTGATACAGAAGCCAGGCAAAAAACTGTCAGATCTGGAACGAGTTACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGGCGGAAGGAGATCAAGAGAAGAGCCAATATCGAAGCAGCAATCCTGGAGAGTCATGGGATAGATGTACAGAGTCCAGGAGGCCACTCCAACAGTGATGACGTGGACGGCAATGACTACTCGGAGCAGGATACTTGGCAAGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGAGGAGGATCTGATCCAAACAAGATGACAGCACTAGCCATAGTGACCACCAAGACCCCATCTCGTTAGCTGTGGAAATGGCAGCAGTCAACCACACTATCTTGGCACTGGCCCGACAAGGAGCCAACGAAATCAAGACAGAGGCCCTGGATGACGACTGATGAGGGAGGGCTGAACGCAAGAAGTTATCTTAGTTTAGACGTAGCACCTTAGCAGACTTTCCTCGGTCCTTAACATGTGTTCTTACAGTATAACTTGCAGTTTCTTGTATGTCAGTTAGCCCTTAGGGTCTTGTTCTGTGAAGATGGCATGGTGCCCTCAGCCTTTGCATATACTCTCTCAGTATTAATTCCCAGTAACTAATAACCAACCAACCAACCAAACTTCCCTCTCCCAGCCCCCGAGGCTAGAAAATCTTGCTGCTCTGTCTTAGCATTCCAAGAAAGTGCTTCCAGGTATTTAGCTAGCCCTCAGTTCTCAAATAGTAGGCTCCGTGTAAAACCTTGGGTACCTTTAGACTCCTGTAACACTAGTCTCTACCCCTCTTCCTTCCCCAAGACTGGTAGGATGCAAGCTGAGGTAGTGTGGCCAAGATTGACAGACGCCATTTGGGGAGTGTCCGCAGAGTAAAAGGAACACTAGAAACCCCCCCCTCCACGTGGGAATAATTGATTTCCAGCTGCAATAAGCCGTGCCTCATAATAGTCACACCGTGGCTAGATTATACTTCTTTGGGTGCTGTGCTAAGACAGTGGAAAAACTCGATCTCAGATTTTGGTTGATGTTAACATGCCTGACACAGACATCCTTTGCTCTCACAAGCTGTGTGACTGAGTAGATAAAATACTGCCTTCTGCCTTTGGGACCATGATTAAACAGAAAAATGACAACAAAAAAAAAAGTTAAAAAAAAAAACCCACAAAACCCAGCTTGAGAGCATTGGGAAAAACCATGAGCCGAAGGTGTAATGATGGTGGGTGTTATTAGAACCACTGTACAGTGCGTGGCGCAGGCACGCCCACCGGGAAGGTGCCGGAAGTCACGCGGAAGCGGCTCTGCCTCCTGTCTGTGTCCCCTTTCCTTGCTACCAAAAACACAGAAAGGTGATTCGAGGATGGAGCTAAGGCCAACAGTGAGTGAACGAACATCCAGTCCCTGTAGCCATTAAACTGAAGCCCCCTCAACATGAGAGGTTGGTAGAGGACTCTGTAGTGGGATTATGCCTGCTGACTGTCACAAGCGCAAATGCTTTCCTAAATAGGAGCAGAAAAAAGCAGGGGACATTTGCAATTTCTGTGGCGGGTCTGGGAGATATGACTTGCTTTGGTGTTCTCTTTACTCTGTCCTTGTAGAGGTGTGAAAAGCTATATTGCTACAGGCAATTTATTTAATAATTGGAAGCCATATTGATAATGGATGTGGTAATATTTGTAAAGTTTAATCTACTTTAAGCAGCAGTAACTAATGGAATTTTTTTCCTTGATCACATATGTAGCACTTTTGTTACTTTTTAAAGATATTTATATTTGATAAATCTTTTTTTCATTTTGAGAACTCAAAATACCAAACAGTGAACTTGCGTTAGAAAAGTCACCCTGTGATCACCTTGTCATCCAGTAGCGAAATGATGAACTACTCATGCATCCAAGAATATTACATCTGCCGGCCTCGTATGAAAATGATCTCTTGGCATCTCGATTAAAGGACACAGTGTCACGGTGCGTAAGAGGAACAGCCTCCAGTGTAGGCTGCGTCTGAAAGAGGCACGGCCGCTCTGTATTTCCTGCCTCGCTCCACCTCTGTGAACAACAAAACCTTGTTTAAAGGGGAATATGCAGAGGGCTGGCTCTTAAGCAAGGTTTCGTCTGTCTGTCCGTCACCTGTAAATGATTTGTAAGATTGAAGGAGGGGGTATTTCCTGACCTCTTCACCCTTCCTCACCCACCAAATGTTTTCAACTTAAAACGATTGAGAGAGAGAGAGAATGACTGGCCTTCCTGTTTTCCCTTCCTCATCAGTGAGATTCTGAGTATCCGCCAGCTTCTGGCTGGTCTCGCTCCACCTAAGGCACCTGCTGATGCGCTCGCCTCCGTGTCTGTCCATCCTGCTTATGTCAGTGTGAGGAGGCCTTTGGGAGGCATGGAGGTGCTGCCTCTGTGGGTCCGTGACTTTATAGAGCTACAGGCAGGACCTGCTCTTGTCCTAGGATTTCAGGGGGAAAATGTATATATATTTTTTCCAGCTTCCCAGAATTGAAGTAAAGTGGAGTAGTCTTTTTCTGTTTCACTGTATTACTTGAACCAACAAATTCAAGAGTAGCATTTGTTGTTCTCAGGAATGACCCGCCCTCCCCCACCCCCCACATT EMBV3_37302 CGTCCTCAACCTGGTGGAGCTGGCCTACCTGGGCGATCTCCTCTCAGGCGACCTCATCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13771 ACGGTCGGGAGGACCCGGAGTAACCGTATCATCTATACAGAAAGGCCAGCAGTCCTAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05190 GCACGTGTTCAAGCTCAGACTAAATGATGGCAATGAGTACCTCTTCCAAGCCAAAGATGA Gene GeneID:526027|SPTBN1:XM_002691326:475_cdna UTR3_Alt 2 NULL GeneID:526027 11 GENE SPTBN1 NULL spectrin, beta, non-erythrocytic 1 EMBV3_02171 GTCCTTTGGGTCACACAGTAGTTTTTGTAGCAGGTATGCCGCCTCTTTGATTCGTGTATC Gene BVT0102_316090 + 0 NULL GK000004.2:31791213-31832392 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30260 TGGTCTCAGAGGAGACGGAGAATCCAATAGCAGTCATGGACCGTGGGGGTCTTTTTCCTT Gene BVV0102_161715 + 0 NULL GK000004.2:105853469-105874499 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182700 TCONS_00182697 TCONS_00182702 TCONS_00182698 TCONS_00182701 TCONS_00182703 1 XLOC_110924 Coding TCONS_00182701 XLOC_110924 Coding Coding SSBP1 4:105842809-105856507 j TSS136471 3787 1 TCONS_00182701_2 148 0.0433060470029047 7 0.724027159231949 8.80476389663971e-05 0.000180350465017232 6.16083769737308e-05 0.000154922606526322 2.87075417631031e-05 1.06334182250946e-15 0.00012731765006251 0.000138314459969812 0.000136898572204634 0.000136108742113885 5.40075238357796e-05 5.63466917156022e-05 2.32383689651767e-05 1.08576916491119e-05 6.98908152862663e-05 0.00116159027379058 0.000676372098153272 0.00105083261090751 0.000406538872692851 6.55705156155787e-05 0.000185256389321282 0.00046655835485108 0.000376703849765517 0.0010104326010434 7.50401544007676e-05 8.59660359160334e-05 9.83973862194077e-05 9.8751432206686e-05 5.14279897747187e-05 0.000111737091868138 XM_005205838.1 SSBP1 PREDICTED: Bos taurus single-stranded DNA binding protein 1 (SSBP1), transcript variant X1, mRNA. 0.0 1364 100.00 0.199366252970689 NM_001256511.1 SSBP1 Homo sapiens single-stranded DNA binding protein 1, mitochondrial (SSBP1), transcript variant 2, mRNA. 0.0 771 87.54 0.164510166358595 TCONS_00182701_2 sp|Q32PB0|SSBP_BOVIN SSBP_BOVIN Single-stranded DNA-binding protein, mitochondrial; 2e-105 302 99.32 0.993243243243243 1 coding 0 0 0 0 -1.35442444240559 0.0082726024162843 0.00181267445793715 0.980459950175691 GCGTAAGGCCGCAGTCCTGCGTTAGGTGTGCGTATTGCTTTGTATAGACCTCCTCTTCTCGCGCGGAGGACTCTGTGGTTTCGTCTCACCTCCCAGGCCCTATACATTGTTGGTTGGGAGCGTCGGGTTTGAGCAAGGGCGCCCGCACATTTCACCGGAAAAGACTAAAGATTAGATTGGAAGAAGAGAGAGTAGAAGCCATGTTTCGAAGACCTGTAGTACAGGTACTTCGTCAGTTTGTAAGGCATGAGTCTGAAGTAGCTAGCAGTTTGGTTCTCGAAAGATCTCTGAATCGCGTGCAGTTGCTCGGTCGAGTAGGTCAGGACCCTGTCATGAGACAGGTAGAAGGAAAAAACCCAGTCACGATATTTTCCCTAGCAACAAATGAGATGTGGCGATCAGGGGAAAATGAAACCTACCAAATGGGTGATGTCAGTCAGAAGACAACATGGCATAGAATTTCAGTGTTCCGACCGGGCCTCAGAGATGTGGCGTATCAGTATGTGAAAAAGGGGTCTCGAATTTATGTGGAAGGGAAAGTAGACTATGGTGAATATACGGATAAAAATAATGTCAGACGACAAGCAACAACAATTATAGCTGATAATATTATATTTTTGAGTGACCAGATAAAAGAGAAGCCGTAGACTGGACGATTCTTCTCTGGCCGGCGTTTGGTACAGTCTCATTTCCAAATCATGCTAGTGTTTATAGTTTCTAAGGACAAGAATTAAAATACTCTTCGTTGTAAAATGAGTGATAACGTTTTCCTGACCGTCACTCCCCTTCCCCTTTTTGTGTCATGAACTCTGGTAGCTCCTGCCTGTTAATGGTATTCACTGATTGTTTATTCTTTAAGAGATGGTTTCTGTGTACAAAATCGTGAACTTTTAGGTTCATCCGTGTTATGGCAAAGGGATGAATGTCCTTTGGGAAGGGCCCCCCCGCCCCCCCACTTTTTTGTGCACACTTCTATTATAGCATAGAGTCAACCACCACAGTGTTTTTGAGTATTGCTGTATGTCAGACATTTATCCCATGGTTGTAGATACTGATTTCCTTATCTGGTTTATAGACCAGAAGCCAAGGGCTGTATCTTCTTCGTGTACTTGCATGTTTAACCAGTACTTTGCAAAGAGTAGGCAATAAATGTTGACACGTGAATGATCCCAATAGGATAATGAGCTTTAGCCCAAAGTGAAGGGGTTTGCTGAGCAGCGGTTAGTATCTAACCTAAATAGCTTCAAGACTAAGCTACCTCAGTCCCGTCTTTTGTCCTTGGACAGTTTCACTAGTAGCATTCATGAAACAGTTTACCACTGGGAAAGACCTGAAGTGCAACTGGGGTGAAATTGTCCATCTCCAGGAGGTGATCCAGGGGCTCTGGTTTCACTGTTTTCTGTCTTTCTAAGCCCCTGTTCTCTGTTCTTTTCGTCTCATGCGGAGCGCTCTGTTTAGGGAGCCCCCTAAACCCCCTCTGGCACTGCGTCTGTAGGTTAGCGCCCCAGGTATGCGTCCCTTTAATTTTTCTACGTGGTCTTCTGCTGTACATGCTATGTACACTTGGGTACACACAGTCACTTTCATCATAAGATTCTGAAAATCACAGAGCACTAAGAATTTACTAGTAATGATTATATAAGATAAACTCAGTGATTTAAATGCATCTTGTACTTTCTGAAGTTGGCATCAGTCCCTGCCCGGTGTGCGCACTCCTTTGCTGCTGTGTACAGAGGCTGGCTGCTGCTGGGCAGGTTGTCGGGTCACACGGTAGAAGTCCCTGTTCTCAGGCTCCAGCTCCGCCTCTAGCCCAGCCTGGTTATTTGTGTCCCAGGCTGTGTGTCCTCTCCGCCTGCCTCTGAGTGTGGTGTTCACTGTAGCTTACATCCTGCTGGACTTAAACAGGAACTGCATTCACATGTTATTTTATGGGCCCTTGGCTGTTCTAAGGTATCTTCTGCACACTTCAACAGCTTTTTGTACTCATACTACAGTTTGGCTAAGGAAAATTGGAGTTCCCTAGTTTATCCTTTACATGCCAAGATATGGGAGAAAATTACTGTTTCCTCATATCAACCGTCTTTAAATTAAAATTTTTTTTTTCCAGCCACCTTTTTCTTTTCCTTTTTCCTATAACTGGGACCATTAATCAGCATGTTACATCTGCCCTCTTGGTTCCCACATTAAAACTGTCTGGTGTTGTAGTACTCACTCCTTGACCCCACATTCCTTAAAGCAAAATTGTAAAGTAGATAAAATTTGTCTTTGGGACAACTTTTTATTCTTGTCCTCAGCAAAGCTACTTTTATGCCCCTTCAAAGTTGTAAGAGGTCATGCATATAAGTATTCCTGTTTAAACTGGGTGATGAATCTGTGCTTTGGGAAAGTGACATGGTGAACAAAACAGCTTAATTGCCAAGTGATTGTGAGTCCGGGGCAGTCTGGTGCAGGGGCCAGAGAGTGTGTCCTCCAGGATCTTGTGAGCTGAGGGGCTCTTCTGCAGACTCCCACTGAAGTTCACTTGAGAGGCTTTGAGGTGGGCAGTGGGGCGTTCAGAATTAGGTGTTCAGGGCGGAGGCCTCAGCGTGCACGTGATGCTACAGACCTGGGGTCCACAACCTGGGGGGCTGCGGGACCATCAACTCTGCCCTCCCCTGCAGGCAGCCCCGGCTGCTGAGAAACCTCCTGCGGTTCCCAGGCTGGTCTCAGAGGAGACGGAGAATCCAATAGCAGTCATGGACCGTGGGGGTCTTTTTCCTTATTTCATGGTCTTACAATGTCAGGGACCGTACCTGTAGAAGACTTTGATTTTGGGATTCCATGTTAGTTTAATGATGAGTATGATATGGGGAAGTGTGGGAGAAAGAGTGTCAAACAGCATGTGTGGTTTGAAAATATATCCCGTATTTGAAAAAGAAGTAAATGATAATAGATATATACCTCAAGAAGTCTAGAAGGAGAAAAACAAAATGTTCTGATGATCTCTGAATGGGAAGATTGTGTATGTTTTACTTTACACTTTTGTGTTTGTTTTTTTTTTTTTTTAAGCATTGAGTATGTATTACTTTTATAATAAGAAATAAAGCTGTTTACATTTTGGGGGAAAAAAAAAAACCCAACTTTTCCATTATTTCCAAGCCAGGCTCTCTCTCATTCACGTCACGCTTAGAAACGTCATCTTTTTTTCTTTTTTTCTTGTATTCTCCTCTTTAAGTATATACAACCTGGAAGGGTTGACTTTAAAGACTATCACATATGAGATCCACTATTTGCTGTGAGGTGCAGTTCTCAGAGAGTCATCCTTTTCTTAAAAATCGCTGGGTGCTTACTTTTCCAAAGACATCCAGAATCATCAAAGACATTTTTCTGTGGCTATTTTGGGGATTACCTGTCATTGCCAACTGGGTTTCAGCCTAACCTTCGTAGCTCATTTAGGGAAAATTAATGGTAGTTTTTCTCACTGTTCCTAAAAGATAACATGCAGTTCTTGAGGGCAGGGTTGTCTTTTACTCAGACTGCCCTTTTACCCTTGTCCAGCTCAGCCTGGCACAGTGATGGCTTAGGGCTTTCTAAATGCGTATTCTGTCAAACTGCACTGGGACATTGACATGCAAATGAGGGCAGGATCACCTTACTTGTTTTCCTGTCAGGGTTTGCATTATATGCCCTGAAGATTGGTGGGAGTAACAGCAAGCAAATCATCATAGAAAACAACACATCGTCACAAGGTTAGTGAGTTATAGAGAAATATCTTACAAGGTAACAGTAATCATATTAGTGGCTGCAC EMBV3_31217 CAACTTGCTCAGGTTTCCCAACTTCACAAATCAACTGCTCAGGCGCTTCATACCAACCAG Gene GeneID:537211|MGC159911:NM_001102197:70_cdna UTR3_Alt 2 NULL GeneID:537211 27 GENE MGC159911 NULL UPF0636 protein C4orf41 homolog EMBV3_01193 CCCATCCCACCCTTCAACCCCGCTTCCCTTGTGGTTTTATTTTGAGGCAGTTGTCAGGAA Gene BVV0102_209083 + 0 NULL GK000025.2:33282334-33291435 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149227 1 XLOC_091104 NonCoding TCONS_00149227 XLOC_091104 NonCoding NonCoding - 25:33288163-33288571 - TSS111762 408 1 0 0 0 0 0 0 0.000578641181219049 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.74562556406891e-05 0.00402679274820969 0 0 0 0 0 0 0 noncoding AACGGGTGTTGTATCATAGCATGTTTTCAGTGTTACCTTTCCTGACAACTTCCTCAAAATAAAACCACAAGGGAAGCGGGGTTGAAGGGTGGGATGGGGCAGGAGGGAGCTGACACGCAAAATCTTTGATCGGAGTTCGGAGCTGGGAAGACAAGCAGCTCTGCTGTTTTTCACTCAGTTCACAGGGATTTGAAGCCAGGGCGCTGCAGCAGCCAGGCTTACCCCCTGATGTGTCAACCGGCCACCATAACCTGAGGGACTTGGGACTTCAACAACCTGCTTTCATTATCTGCCCTTTCAGCCAAAGCTGGCAGTCACGAGGTGAAGTTAGCCACCCCTCAATACACGCGGGAGTAAAAGAACCCAAACTGCAGGGGCTGGAGAGCAGCTCCATGGGGGTGTCTGGTT TCONS_00146855 TCONS_00146857 TCONS_00146858 TCONS_00146859 TCONS_00146860 TCONS_00146864 TCONS_00146866 TCONS_00146868 TCONS_00146871 TCONS_00146873 TCONS_00146874 TCONS_00146861 TCONS_00146862 TCONS_00146865 TCONS_00146867 TCONS_00146856 TCONS_00146863 TCONS_00146869 TCONS_00146870 TCONS_00146872 . 3' 2081 TCONS_00146855 TCONS_00146857 TCONS_00146858 TCONS_00146859 TCONS_00146860 TCONS_00146864 TCONS_00146866 TCONS_00146868 TCONS_00146871 TCONS_00146873 TCONS_00146874 TCONS_00146861 TCONS_00146862 TCONS_00146865 TCONS_00146867 TCONS_00146856 TCONS_00146863 TCONS_00146869 TCONS_00146870 TCONS_00146872 . 3' 2488 EMBV3_04769 TGCCTGGCTCCACACTGCTCCTATCTGTCACTGTCTTTTCAACCACAACGTGCTCTGGAA Gene BVV0101_030160 + 0 NULL GK000025.2:3736164-3744165 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146042 TCONS_00146043 1 XLOC_089003 Coding TCONS_00146043 XLOC_089003 NonCoding Coding FAM100A 25:3741375-3749205 = TSS109299 4149 2 TCONS_00146043_3 286 0.103639431188238 3 0.470430450887725 0.000320801567036671 0.00116903813048086 0.000433449039796876 6.43272555873876e-05 0.000229237860359423 4.99277373342648e-09 7.58963186425485e-05 0.000138554622406965 0.000260528460473116 2.42720233614854e-12 1.86931679590962e-12 0 3.01409710762086e-06 6.43727100801366e-09 7.01560930323237e-09 0.0013686104000969 0 3.49813506854549e-08 6.79200650945078e-05 0.000346480590889839 0.000472502089434962 1.05928760054313e-08 3.18308474329044e-06 5.86263908514287e-05 0.000295000143931781 0.000685726575165253 0.000138716811952963 2.77698850465076e-05 3.52219972720513e-12 7.64125585545716e-12 NM_001076951.1 UBALD1 Bos taurus UBA-like domain containing 1 (UBALD1), mRNA. 0.0 2446 99.93 0.327307785008436 NM_145253.2 UBALD1 Homo sapiens UBA-like domain containing 1 (UBALD1), mRNA. 0.0 1481 84.89 0.326825741142444 0 noncoding 0 0 0 0 0.042073239864414 0.708060295012927 0.00670970264189561 0.907307872092675 GCCGGCTCGCTAATGGTGGACGCGTGAGGCGGAGGAGAGCACCGTGGCGGGAGGCTGGAGCGGGCAGGCGGCGGCGGCGCCATGTCCGTGAACATGGACGAGCTCAAGCACCAGGTCATGATCAACCAGTTCGTACTGACGGCCGGCTGTGCGGCCGACCAGGCGAAGCAGTTGCTGCAGGCGGCCCACTGGCAGTTCGAGACGGCCCTCAGCGCCTTTTTCCAAGAGACCAACATCCCGTACAGCCACCATCACCACCAGATGATGTGCACTCCTGCCAACACCCCCGCCACGCCCCCCAACTTCCCCGATGCCCTCACCATGTTCTCCCGCCTCAAGGCCTCCGAGAGCTTCCACAGCGGAGGCAGCGGCAGCCCGATGGCCGCCACGGCCACATCGCCGCCGCCGCACTTCCCGCTCACCGCCACCGGCAGCTTCGCGGCGCCCAGCTGGCCAGCCGCGGCCTCACCCCCAGGGGGCGCACAGCACCACCAGCCGCCGCAGCCGCCCCTGTGGACTCCGGCCCCCACTTCCCCGGCGTCAGACTGGCCGCCCCTGGCCCCCCAACAGGCCACCTCGGAACCCAGGGCCCACCCCGCCATGGAGGCCGAGAGATAAGGGAGGCCCCTCCCCCCTCCCGGAGGCCAGGACCCCGTGGGGCGGGGGAGAGGACGTCTCTGCGGGCCCCCTTCACCCTCCTCTGTCTGCACCCCTTTTCCCCGGAGCCCTGGAGGGGAGAGACCGGACCCTCGAGCCAGCCCACAGGCTGCCCGCACGCCTGCCCGGCGGCACAGGCCTGTGGCGCCCCGCTTCCATGGATTTGGTTTCGAGTCACCTGGGTGCTGATGGACAAAAGCTCGGAGAACAAGCAGCCTTCCCCAGAGGACTCGCCCACCCTGCCCCGCCGGCCCCGGGGGCAGCGGAGCATCGCCACGCCGGAGACTGGGCGGGCTCCTGCCTTGGAGCTCCCTGGGGCCGGCGGGCCTAGATCCCCACCCTCGGGAACGCAGAGCCTTCTCCGCATGTGTGCGTGTAGCTGTGTCTGTGTATTTATACGTATGTCGCTCTTCGAGAAGCAACCTAGTTTATGGGGCAGCTGGACTTTGCATGTTAGAGTGAGCCCCCCTCGCCCGCCGCCCTTCCCCCCAGGGCCCTGCCCCTCTCTCCTGCTCCCTGGGCAGCCAGCCTTGCTCTTCCCTGCAGAGAAAAGGATTGTGGGAAACTCCAGGACTCTTCCCACCCATCCCCCAGCGCCTGCCTGCTGGGGCTGCCTGCATGCCTCCCCAGAGCCCGGGGGTACCCCATCCCCAATTCCTTTCCCCCTTTTAACAAAGGAGAAGAAAGAGTTCCAAACCACCACCAGGCTCTGTGGTCGTGCCTCATATCCTAAGCTTTGCTGCCAGCTGGCTCCATGTGGAGGGGGAGGGTGCCAGCCGAGCCCAGAGCAGAGGCCAACCCCCGAGTCCTGCCTGGCTCCACACTGCTCCTATCTGTCACTGTCTTTTCAACCACAACGTGCTCTGGAATCTTCCTGCCCACCCCAGGCTTTTCCCATGAAGTTAGTTCCTGCCTTGTGTTCCCAGAACCCCTGCCTCTGTCTGCTCACCCTTCCCCCTGTCCAACTGGACAGATCCCGGCCTCCAGGGCTAACAGCTGCCTTCCGGTCTGCCTGGGTTTCACACAAGGACTTTTCTTGCTGTCTTTAGGGCCCCAGTGGCCAGTTGCAGGCTGGACCCTCAGCCCCACCTCCAGTAGCCACGCTGGGTGGGGTAGGGCCCTTCCTTGGGGGAGGCGCAGGCCACAGCCCCCGTGGTAAGATAGCAGGCATGGATGCAGAGCCCGTGGGCCAGCAACAGTGACTGGATGAGGCTGGGCAGAGTCCAAGCTGCAGCTCAAACCTTTGGTTGCCAAGGAGACAAACCACTCAGGGGCAACAGACAGTGGATCCCCAGCTGCTCCCACGCCAGGCTGGGCAGGCACCTACTCCTCTAAGGGAGAAGCTGGGCACGACTCTGCCCTGGGGCAGCTTTGAGAGAAGGCAGCCTAGACCTTGCACCCCTTGGTGAGGCTGGAACTTGGGGGAGTAAGGGGACGTGGGCCCCTGCAGATGGTCACCAGTGGACTGACTTCCTAGTCAGGAGGCCTACCCCACTCAGCCCATTGGACAGTGCCTGGGGGTGGAGAGTTCTGTTTCAGAAGATCTGGCTGGCAGGCACCTCAGCACCTGCCAGCGGCAGCCCCGCTGCCACTCCCGGGGTCACCACACAGCCCGTTGCTGCCCTGTTGGGGTCTGGACAGCCTCACTAGAGGCCCCCACTGGTCACAGGACTGACTGCAGCACCCCCACTGCAGCTGTTGCTCATGTCCTCACCTTGAAGCCCACCCTTCTAATGGCCTTTGGGGGCAGGGGCACAGCTCTGCCTCAGGTGCCTGTGGGGGGAGAGAGGAGGCTGTCCTGAGCTCCTGAACATTCACTGCAGCTCTTTCATCCTTTTGGAGGGAAGACAGTTCTCAGGTCGCTGAGGGTAGGACAAGACTGAGTGACTTCACTTTCACTTTTCACTTTCATGCCTTGGAGAAGGAAATGGCAACCCACTCCAGTCTTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCACACAGAGTCGGACACGACTGAAGAGACTTAGCAGCAGTTCTCAGGAAGCTGCCACACCCCCTTCCAAGTGTAGGAGGCAAGGAAGTGCTTCTGTGGGTGAGTGTGAGCTCCCCAGTGGCCAGACGACTGAGGTGGCCATACCCACTGGAGCCATGCAAGAGGGTGCACAGTCCAGAATGTCCACTCAGGCTCCCCACCCCCACGCTGGCCTCAGGGTGGCCTGTGGGAACTATACCCTCACTCCTCAAGTGTGGTCACCAGACCAGCTGGGTCCCACGGGAGCTTGTCAGAGATGCAGAACGACCTCTCTCTCTAACCCCAGCCCAGACCTCCTGAGTCAGAATCTGCTTTGAACAGGATCCTCACGTGCCCTGTGGACATTCAAGGGTGAGAATCCCAACCTGACCAAGCCCACTTCTGTCTCCAGAGGCCACCAGGGGCCAGGCCTGGAGGCCCCAGGAGGAGGTCCTGGAAGGACTTAAGTTTCCTGTAGATGCAGCTTTTCCAGTGTGGGCACTCCAGACACTGGGGTGTCCTGTGCAGCACCCCTGACCCCTTTCCATGAGTTCGAACCAGTAGCAGCGCCCAGTTAGGACAACTAGAAGTGTCTGCAGGCAAAGTCACCCCAGTGGAGAGCCACAGGGCCTCCGGGGAGCCCCCTGGGGGCCCACAGCATTGGTCTCTGGGGTGGAGTCCTGACAATAGTTTTAAACATTCCCCAGGGCATGTGATCAAGTTGTGAATGTACTAGAAACCACTCAATCATACACTTTAAAAGGGTAAACTACGGCACGTCACTTATGTCATAGCTGTTCTTGAAGCAGCTTCCAGGTGACTGATAGAAAATGACTCATGGAACACAAGCCCCTCGTGGCAAGCGGGAACCCACTAGACTCGTGACCCTCCAGCCTGTAGAGCACAAGTGTCCCCTGGGTGCTTGAGGAGGAGGGCCCAGGAATCTGATTTCTAATGAGGGCCCTGGGCACGCTGGGAACCAGAGCAGGAGGGAGCGGAGAGTGGGGCTAGAGCTTTCCACCAGTGCCCGGACCTTGCCAGGTTTGCTGGAAGCCCCACGCACACCCTCCCTCCTCCTCTGCTGAGCACCTCCCAGACAGGCAAAGGGCTGCAAAAGGGGGTGGGAGACGTGAGGGGAGGCAGAGGCGGGCCCACACAGATGTCAAGCACTCCGGATGGAACTCAAGGGCAACACAGAACCTGGAACTTCAACTTCTCCAAGCCTGGAGGCTCAGAAGCAAGACAGGAGGAGTCAGTAATCACCTCCCACCACATGTGCAAGTGCAAACTGGCTAAAATGCAAAGATGAGGTACAAACGGAACAGTCACATTTACAGCCATTCTTAGCTGTCCGTTTCGGCACTTTCTGGAGCCTCCTCAACAACACATGAAGACCAGCCTCTGGGCTTCATCACCACCCACCTGATCACCAGACTTGAGCTCCATCACTTTGTTTCCAAAAATTCCACTCT EMBV3_27760 TGTCCTTTTTGCATGGTGTCGATACGACGGGTTGTTTCTTCTTAAGTGGGATGGGAATAC Gene BVV0102_329558 + 1 EMBV3_30788 GK000015.2:51570392-51576357 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059490 TCONS_00061643 TCONS_00059493 2 XLOC_036434 XLOC_037108 Coding TCONS_00059493 XLOC_036434 Coding Coding - 15:51569707-51572890 - TSS44642 3083 1 TCONS_00059493_2 194 2 0.0317410433689503 2.72142945934525e-05 0 0 0 4.32197791580608e-06 0 5.16814384845547e-06 4.23561936460898e-05 0.000501717667573518 0.000657304051449439 7.13663352739747e-05 0.000124645440889914 0.000912287912695542 0.00294143215372026 0.00530701086412596 0 0 0 0 0 0 0 0.000317404077985236 1.27752137753657e-20 0 0 0 6.10008358964148e-05 1.50976164644522e-05 2.92475096781977e-05 XM_005200456.1 LOC101908409 PREDICTED: Bos taurus putative RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like protein 1-like (LOC101908409), partial mRNA. 1e-138 499 95.79 0.0999026921829387 NM_014188.2 SSU72 Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) (SSU72), mRNA. 8e-84 316 72.03 0.192993837171586 TCONS_00059493_2 sp|A6NK39|S72L1_HUMAN S72L1_HUMAN Putative RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like protein 1; 5e-97 284 72.16 0.994845360824742 1 coding CTTGGAAGAGCTGGACCCAGTCGGTCATCCCCTGGCCTTCAGAGTTCCCTCAGCCCCTGAAGTCCAGGCATCTGGCTGGAGTCCCAAGTGGCCGCCACCATGCCCTCGTATCCGCTCAGTGTGGCTGTGGTCTGCATGAGCAACATGAACAGGAGCATGGAGGCCCACCGCATCCTCAGGAGGAAAGGATTCCGAGTCAGGTCCTTCGGAGCTGGATCTCGAGTCAGGCTCCCAGGAAGGGCACGCAACCTCCCCGTGGTTTACGATTTCTCCACCACCTATGAGGAGATGCGCAAGGACCTTGTGCGCAAAGACCGACAACGCTATAATAGCAACGGCATCTTACACATCCTGGGAAGAAACGAGAGAATCAAGCCTCGCCCGGAAAGATTTCAAGAGTGCCGAGATCGCTTTGACGTCATCTTCACCTGTGCGGAGAGTGTCTACGACAGGGTGGTGGAGGAGCTGTGGGTCCGAGAGCAGGAGACCTTCCAGCCTGTGCACGTGATCAACGTGGACATGGCTGACAACGCGGAGGACGCCACTCTTGGGTCTTTCATCATCTGTGAGCTCTGCGAACGCCTCCAGCAGGCAGACAACCTGGAGGACTCTCTGGTCCAGGTGCTCCTGGCAGCCGAGAGCAAAACTGGCAAGAGCTTTCTGCACACGGTCTGCTTCTACTGAGGATCTTGTCTGCTTTCAGCTCCTCTTGGTACACTCCAGCCTGGGAAGGAAGTGGAGAAGGAAATCTTTTTCTGCCAAAATAACATGAACACCCTGGAGGCATCAAACCTTTCCATGGTGGGGGACGATGGTATGGATTCTTGACCTGGAAGGAACACTTCAGGTCTCACAGGGCTCTGCGAGGAAGTTAACCTAGAGGACTCCATTATCCACATCAAGAGACCAAGATTTACAATGGACCAGTGATGTCTTGAAGGACATTCAGCGAAGAAGAACAAACAAATCCAACACCATTTCCATTCCATCATTTGTTTTTACTTCATCATTTTAATACAGTTTCCTTTTGTCGTTTTGGTATTATGCATCAGTATAAATGAATTTTTCTTTTTAGTGAGATATGATTATATTTAATGTTTGAACTTTAAAAATCTAATTTTAGATTGTATATATTTTGGTAAATGCAAGTTTCATAGAAACTCAGGCATTGATTGCTAAAATGTGAGCACAATCTGTTCAATTCAATATTAATGAAATGAAATAATAGTTTTCTAGTTTATAGAAAATGGATCTCCTAATTTTTGGTAGGGGTTGGATCTTGCAAAAGGAACACCTTGGTTTCTTACTGTTCAAGCTGAATGAATTCCACAGAGTAAAGCACTCTTTCCTCAAGCGGATTTTCTTCATGCATAAAAGTTTCATTGATTATTGAACTCCTCTAAACGTGGATTCTATGTGTAGGGAAGTGAATCATCTTGGGTCTGACCAGCAATGACACCTAGGCATGTGTAACTTACAGCAGAAATTAAAGGAAGGGGGAGTTGGCCTGGTTGAATGAGGTATCTTGCTATGTCAGAAGATTGATGTGGACTTTATTTACAGAGCAAAGGTAGGATGGAGCAAGAGTGTACCTGGAGGCAAGGGATGAGCTAGTAGAGGATTTCCCGAGGAGTGTGGATTGAGCAGTAAAGTGGATGCTCTGGACAGGGGGACAAGCTGTGGGATCATAGGAAGATGGTGGAGTTGAAGGATGGAACATGCTGAAGAGGAGAGAGAGAGAGGGAAGAATTTAGAAGCAATGTCAGTTTTCTGTCTTTCCACACTGGTGACAGGGTGTACTTATCCACATGGGGCAGTGCTGGCAGTAGGGAGGTGAGGGTTTCTTTCTGGGTAGATTCAATGAGCTTCAAGGTCAGTCTTTCATCTGATGTTGAGGTAAGTAGGGCAGGAATGGGAAAGGGATCCGATAGTGTGTTGAGATGATCATCTCCAATGATGGGAACACAAAATGCAAATAGGGAATGTTGGGGACCCTTTATAAGAGAGAGAAATGATCTGTCCAGGAGATCTTACTTTTGTCAGAACATTCACTGGAAGGAATTAAGAAAATATTTTTGGTTGATTTCCTGTCTGTAGGGGTATGGAGGAGGCAAATATGATAAAGCATGTAAAAGTGCGGCTGGTGTTCCGAAGGAGTGACTCCAGTGAGGAAACTCAACATAGAAAGTGTCCATGGAAAAGTTAAAGGGAATGGGACTGGATGAAATGGATGGTGGGACATGGTTTGTCTAAGAGTCCTTAGAGCTGAAAAAATAACAAAGATTTGAGGGTTGACAGTTGAAGGTTGATGAGTGTCCTGCTTCAGGTTTAGATGTACTGCAGAGATCTGGATGGATCTTGGGAAGTTGCTGTCTTGGGGGAAGGTGTAGACAAAAGCAGTTGGACAAATGTAACAACACTGAATATCTTTGATATTGAATGAGTGATCTTTGTGCTGGTTGGGTTTGCTATGAATGGGACCTGTTCTAGTGACTTCACATAAAGAATTGTCAAGAGAATAGGAACCCTCTCATGCCAACATGACATGCCAACCCTTCCAATGTGGGGAACGATGGTGTGGAACTGGACCTGGAAGGAAGGACTCAGTGTTCACAGGGTTCTGCAAGGAGGTTAATCTCGAGGACTCTCTTCTGGATGGACAATCAAAGCTGATCACAGAGCCCAGGACAAGCAATGCATTGAAGGATATTCTGAGAAAAAGGAACAGTTTCTATTTTATTGATCTATATGGATACTGATTTCCTTTTGTCCTTTTGGCATGGTGTCGATACGACGGGTTGTTTTTTCTTAAGTGGGATGGGAATACATTGAATGGAAATTATATTGAATTGGAAATATTTTTGCTTTTAGAGTGTTTGTCTTTGATGAATGCCTACTTTATTAGAAACTCAGGGTAGATCATGTGTGGCTTTTTTAGGGGAAAATCCAAGCATGATTTGTTTAATCAAATAGCTTATTTATGAAAGAAAATTAGAAATCGCTGTAACCCTGGTTGCATTTATTACTAAAATCGAAGCCCTATCTGTTGAACTATGTAGCTCATTTAAATAAACAAAATGAAA TCONS_00059491 s 3' 5114 TCONS_00059491 s 3' 5114 EMBV3_23015 TTGTCACTTCCAGAAAAAGGGAAGCCGGGAAGAAGGAGGGCAAGCAGCTCGGTGGATATT Gene BVV0101_025246 + 0 NULL GK000009.2:42118674-42153687 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41931 TCGTGTCCAAGTTCTAGTAATCCCTGTTTCTGTGCTTCTACTATATGAAATGCATGGCCC Gene BVT0102_157664 + 1 EMBV3_22374 GK000011.2:96038737-96044188 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41447 AGAAGCGACAAGCCAGGGAACAGCTCATTGAAGAGTGCATGGCCAAGATGCCACAGATGA Gene GeneID:504718|GADD45GIP1:NM_001080224:26_cdna Constitutive 0 NULL GeneID:504718 7 GENE GADD45GIP1 MGC148651 growth arrest and DNA-damage-inducible, gamma interacting protein 1 EMBV3_35799 TGAAGCTTTGTCACAGGAGGACTTAGTGCATACAATTGGTGAGAGTGCAGCATTGGGGGC Gene GeneID:527125|LOC527125:XM_002686926:198_cdna Constitutive 0 NULL GeneID:527125 4 GENE LOC527125 NULL similar to hyaluronoglucosaminidase 6 EMBV3_09948 ACGTTTTGTCGAGTAGGAAAAGATGTTTTATTTATTGTTCCCTTGAAATGACTGACCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02361 CCAACCTCTCAGGTGCCTTGCATCAGGATGTTAAGCCACAAAGGAAGTTGGTAAATGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00735 CAAACAGAGCTTGATGGTCCAAAGTCTAGGAGGTTATCCAGCTTACAGGTGCTGAGCTCT Gene BVT0101_015922 - 1 EMBV3_25976 GK000004.2:107397165-107447956 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185257 TCONS_00185258 1 XLOC_111537 NonCoding TCONS_00185258 XLOC_111537 NonCoding NonCoding - 4:107437707-107448597 - TSS137766 2653 1 TCONS_00185258_1 131 0.641914813418771 6 0.756910643768941 0 0 0 0 0 0 0 0 0 1.91276743930269e-25 3.59870117284819e-06 0 0 0 0 0.000387503779747051 0.000518951431518845 0.000275224562000931 0 0 0 0.000237104514242225 0.000283416559750697 0.000278036743306819 2.61155538322032e-06 0 0 3.55502454656958e-05 0.000111957420882231 1.61785646803897e-05 XR_234435.1 LOC101905834 PREDICTED: Bos taurus uncharacterized LOC101905834 (LOC101905834), 0.0 2985 100.00 0.623445156426687 NM_176882.1 TAS2R40 Homo sapiens taste receptor, type 2, member 40 (TAS2R40), mRNA. 2e-66 259 82.94 0.0938560120618168 0 noncoding 0 0 0 0 -0.0314015084212732 0.813657339250263 0.0141872687371359 0.765832365569868 GGGTGGCCACCAGCATAGACATGATCAGAGGGATGAAGATCCCCAGAGAAGGGAAAGCTGGAGCAAAAGGAGAAGAACAAGGACAGCCTCACAAGCCCAGGCATCAGCCACATGACCTTCCTTTTCATCACGGAGAACCACGGATGACCCAGAACAGCAGACTGTACGTGTTTTCCAGCATCATCCAAATCTGTAGCAAGAGCCTGGAAAAGCTCAGCATGAGCAGAATGCAGTCCAATGGGGAGTCTTTTGCCTCTGACCCACTCGGCTCCATGGATGACGGTGATGAGGCCATTCCCAGCAATGCCAATGAGGCACTCTATTGCAGAGACCACCAAGGTGAAGACGATCTTAAACCTGGTCGTGTCTTTATCCATTGCATCTGTGTTCACCGTCACCATTCTCTTTGGCTCTGATGTTCAGATTTCTGCCTGAAGAACTGGTACCTTCTCTGCAACTGTCTGATCCTGACTCAGTGGTCCTCACATGGGAGAGAAGGGACTGGGGATGTCTCACTATTCTCCTGGTGGCGTGCCTAGACCTAGGTGGAGGGTTGCTGTTGTGATCGTGGCTGGTTACAGTAGGGCTGGTGTTTCCACCTTTTGGTCAACTTTTCAGCTGTAACGAAAAGAAAACCAGCCTAGATGTCCCATGAAATGAACCACTGTAAGAACGAAGACCAGGGATGTGGAAGAGATGTGATCAAAACCTAATGGGCTTCTGAGAGAACTGAAATGTCAACAAGGCTTGTTCTGGTTGTTCATAAAATAAGCAGTTATGTATTTAAGTGAAAAATCTGCTTGGGACATCACATTCAGCAAGTTGTAAAAGAGTGTCTTTTGAATATAGCGGAAATTGAGTCCTGAAAAGATAGAAGCACGTGCAAATGTGACTGGAAATACTATTGCTCAAGGTCCTGAAAATATGGCTAGGAGATGAAAAGATAAATTGTGTGAAAAGTTAGTAAATGTTGTGACATTTGCTATTGCAGCTAAGAGTAGATATTTAGTAGTACTAAGATGTAATAATTAGTTTTGTTTATTCACTGTGGGTTTGAGAATTTTTATGATTGAAAATATTTTGGACAGTGTGCCCACGACAGGCACAATACGGGGAAGCAATTAAGAATTCATTTTTGTAATAGATGGAACTTTCAAACAATTTAATGTTGATGATGTTTCTGGGATAGAAGATGATGCTAATGTTGGACTTGCCCTTAAAGGTAAGTTTCATGTTGCAAGTTATCTAAGGACACAGTCATTACACCTACTCATTTGCCTTATTCAGCAGGAATTGGTCTCTGCTAGAAGTTAAAAATGGAACACATCACAGACACAGAGCTCAGCACCTGTAAGCTGGATAACCTCCTAGACTTTGGACCATCAAGCTCTGTTTGATGAGTTGGACACAGCATGGCAGTCTGCTCCCTGCAGGTAGATGGAGAGGCTAAGTCATAGCTGAAGCTAAGGAGAAATGGTGAACTGTTGAAACGAACTCACATCATCTGAGGGAAAAAATATCTTTGCTTATGTTAAGCAGCAAAGATTGTTACCACATAACTGGCCTTTTGGGTTAACAAATGCTTTGAATATTTCCCTGCAAAACCATCCACAGTAGTTATAAAACATGGAGACAATTATCTGGCATAGTGTTATCTGGTCCTCTTTTCTGTGCTAGAGTTAGTTGGTGGAACTATAATTGATGGCCTGAATTCCGTGATGGATACACTGACCACTGGTGTGGCTTATTGATCTCAATTCTGAAGACAGTCTCCCACCGTTCTGTGCCTTTTTGTCAGTCCCTGCCTGTAACGTGGAAGGTGACCCGTGGTGCACACAGGATGGGAAATGTAATACAGTGACACCGGAAAGTCAGATTCTCGCAAACATCCTAGCAATTGTGCAAAGGTTTTTTTTTTAAACTCTTTGAAAATGCCTATGGTTTTCAATAGCTCCTTTCCAATATTAAATATCCCTTCTTATCTAGACTATCTGTCAAGGTTGAATTCTGTGTTCATATCAGACTTGAAACAAGATTTACAGTGACATATTGGTGCCAAAGAAAAAGTTGCAGATTTCTGGTTCCAAAATAAAAGTCAATGAATTGTGAAATAAAATATTAGAAGTAGAATATTCCTATTTTTATCTTAACTTTTTTTTTTTCCAATTTTGAATTTGAGATACAGATGTTAATATCATACACACATGTATTATGTGGCTTGGTTGCAATCATAGTTCAGAAAAATAGTTTGATCATTTCCTGGCAGTTGGCTTATTTTACTTACCAGCGACATAGACCTTTATGTTCTTGGCTTTTGTAGACTGCAGTTTTCAATGATTTTTTTCAACTTATGTCCTTGTGTGGGCAATGAATTTTTTAGTGGCTCTAAAGCTTAGCTAACATTTTTCACCATAAGATGGAGCCTATGAATCCTTCTTGGAAAATCAAGCAATTACTTAATTCTTCCACTAGTGGGAGGACGTGCTCTTTCTAAGTAGGAGCCTCAGGAAGGTATTAAAAACCTTTTCTATATATTTTAGGTGGTTGACTAAGAGTTTTACCTACTCACTTTTAGGGAAAGTTTCTGAACCTTTTTATTCATGGTCAGAAGTAAAGCTTTTTTGAGAAAATTCATATCCGTCTCTTAAAAATG TCONS_00182746 r 5' 28406 TCONS_00182746 r 5' 19551 EMBV3_16892 ACACTGGCGTGGATGTGTGGGCCTTCGGCGTGCTCATCTTCTGCGTGCTCACCGGCAACT Gene GeneID:614815|LOC614815:XM_002698081:86_cdna Constitutive 0 NULL GeneID:614815 25 GENE LOC614815 NULL similar to SH3-binding domain kinase 1 EMBV3_11601 GTATCGCCATGGGGTTGCAAAGAGTCAGACACGACTGAGCGCCTTTCCCTTTCACTATGA Gene BVV0101_047019 + 0 NULL GK000004.2:43926659-43994071 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16658 TCAGACAGTGAGAGAACTTCGTATTTTTCTTGTTATTACTGTCACTACTGGATGGGCCTG Gene BVV0102_021754 + 0 NULL GK000030.2:92200989-92224139 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03098 ATACTGGTATGAGGAAGCTTTGAGAGATGAGAAAGAGAGAGCTGCCGCTGGGGATGCTAC Gene GeneID:519325|MAGEA11:NM_001080732:27_cdna Constitutive 0 NULL GeneID:519325 X GENE MAGEA11 NULL melanoma antigen family A, 11 EMBV3_01878 TAGGGAACAGCAAGCACCACCTCCCACCAGTCCCCACTTACCAGTTCTCATCTGTGTATT Gene GeneID:527604|TUSC5:NM_001083707:133_cdna Constitutive 0 NULL GeneID:527604 19 GENE TUSC5 MGC138994 tumor suppressor candidate 5 EMBV3_04463 CCGAGAACTGTATGACTTGGGACATACTGATCCATACGATTTCTGCTATCTTCTGTGCTC Gene BVV0101_062742 - 1 EMBV3_05052 GK000006.2:83643974-84904059 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30211 GCAGCTGGACAGAGACCCCCTGGAGAACTTGTTTCTGATGCTGGAAATAGATAACCGCTT Gene GeneID:518774|LOC518774:XM_002698598:17_cdna Constitutive 0 NULL GeneID:518774 26 GENE LOC518774 NULL similar to mCG128871 EMBV3_39159 AGACGACCTCTGCAACCTGGACCCTGTTTGGCATCTGGAATGCCTTTGGATTTCTCATAT Gene GeneID:788038|MGC157082:NM_001102347:2_cdna Constitutive 0 NULL GeneID:788038 18 GENE MGC157082 NULL hypothetical protein LOC788038 EMBV3_10870 GCCAGCTCTGATCTGGCCTACTGATAGGTTGGCCAGCATATAATTTGGATCATTCTGTCC Gene GeneID:515498|C13H20orf30:NM_001014930:32_cdna Constitutive 0 NULL GeneID:515498 13 GENE C13H20orf30 C20orf30 MGC133814 chromosome 20 open reading frame 30 ortholog EMBV3_36137 CCATGGGTATGGGACTTGGCTACCTCTCCCTGAAATGGCTGCCAGCAACATAACAGTAAA Gene GeneID:782162|LOC782162:XR_084584:101_cdna Constitutive 0 NULL GeneID:782162 14 PSEUDO LOC782162 NULL similar to solute carrier family 25, member 32 EMBV3_00715 CGGGACAGGGTGATGGGGAAGGTCAAGGATGAGGTATGCTCGGATATTGCTCTAGATGTT Gene BVV0102_074620 + 1 EMBV3_09703 GK000016.2:65134058-65184702 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00069942 TCONS_00069945 TCONS_00069939 TCONS_00069941 TCONS_00069938 TCONS_00069943 TCONS_00069940 TCONS_00069944 TCONS_00069937 1 XLOC_042098 Coding TCONS_00069945 XLOC_042098 Coding Coding LOC781543 16:65179907-65237309 j TSS52048 5849 2 TCONS_00069945_1 180 0.0627457685074372 9 0.898259612201878 0.000973942623680477 0.000395980764114803 2.39230420061352e-05 1.43256276885817e-09 0.000126774609644556 3.84219472368813e-05 0.000177358805364028 3.39380908560919e-07 0.000204678389264221 9.70808199346673e-08 4.90631865027041e-25 8.12810728677286e-14 5.25909444966452e-07 0.000786163995260916 6.7879022891166e-05 2.73814312050193e-18 0 9.68232706131274e-18 5.43879461889549e-08 0.00144538793778382 7.37593717611885e-08 1.93890452037771e-18 3.03970430614632e-05 8.24328290277265e-10 0.00120087884543559 0.000713746597297228 0.000932497765402119 2.09466298632623e-11 5.59967894153486e-11 1.72864862321401e-22 XM_003583265.2 RGS8 PREDICTED: Bos taurus regulator of G-protein signaling 8 (RGS8), 0.0 1.020e+04 99.98 0.967173875876218 XM_005245555.1 RGS8 PREDICTED: Homo sapiens regulator of G-protein signaling 8 (RGS8), 0.0 2778 78.15 0.580612070439391 TCONS_00069945_1 sp|P57771|RGS8_HUMAN RGS8_HUMAN Regulator of G-protein signaling 8; 9e-132 371 99.44 0.994444444444444 1 coding 0 1 1 1 -0.070500698409095 0.564047931393736 0.00570352378502591 0.932195848898145 ATGTGTCAGCCAATAGGCGGGCAGGACCAGCCTGGCAGCTGAGGGACCCCCTCGCTGGAGCGGAGACTTGGGTGATGCTGACACTGCTGGTCCAGGGACCACGCTCGGAGAATTACTGTACTAGGGCAAGCAGGAAGAGAGAATCCTCCTTGTGGAACTGAACCGGGCAGTGTGAAGATCCATGTGGAGCTCCTTACCCGCAGCCTCTCTGACCATCCCGTTGGCAAAGACGCGCAGGCCATGAGGACTGGTCAAAGACACCTGTGCCTGTGATCCCTGCAAAGGAGCAAACCTGAGTGGTGACAGCGCCTGACGAGCCTCCCTTGGAGTTCTTCCAACCTTCCTCCCGCTCACGCCCTCCCCGGGCTCCGGCACTCCCACCTCCGGGACAGGTCCCCTTGGAGGGAGGTGAGAGGACGTGAAAGGGTAAATCCCTGAGCCCTGCAGTCTTATCTCCCGCCCTGTCGTCCCTGCACATCAGCCAGAGGGTTAACCATAAGTGGGCGCCCGTATGGCCGCTTTACTGATGCCACGCAGGAACAAAGGGATGAGGACTCGACTGGGATGCCTGTCTCACAAGTCTGACTCTTGTAGCGATTTCACAGCCATTCTTCCCGACAAACCCAACCGTGCTCTAAAGAGACTATCCACAGAAGAAGCTACAAGGTGGGCAGATTCCTTTGATGTGCTTCTCTCCCATAAGTATGGAGTGGCTGCCTTCCGCGCCTTCCTGAAGACGGAGTTCAGTGAAGAGAACCTGGAGTTCTGGTTGGCCTGTGAGGAGTTCAAGAAGACCAGGTCAACCGCCAAACTGGTCTCCAAGGCCCATAGAATCTTTGAGGAGTTTGTGGATGTGCAGGCTCCGCGGGAGGTAAACATAGACTTCCAGACCCGAGAAGCCACGAGGAAGAACATGCAAGAGCCATCCCTGACTTGTTTTGACCAAGCCCAGGGCAAAGTACACAGTCTCATGGAGAAAGACTCTTACCCCCGGTTCCTGAGGTCCAAAATGTACTTAGATTTGCTGTCCCAAAGCCAGAGGCGGCTCAGTTAGAACTCAGATGGGGACTCTTGGAGATCACTGGCTTCCCCTTCCCCTTGCTGCCAAGACCATATTCTAATGTGACGTGTCATAGGTGTTCAAAAGCAGTGGCGATTAGGTTGGAAGGCCAGGAGTGAGGAACGGATGAAGAGCCATCCCAAAGTCTGATCAGCCGCCGGAGCTCGGACTCTGTCCTGCCCCCTTTACCCGTGTTTGTGTCTTGGTTAGTGGTAGTACTTTGTCACCCTTCTTTGGGTTGGCAACTTGCTCTTCATAAGGCCTTGGGTCATCTCCACCAAGAAGGGAGATTTGCTGTGCTGGGCTAATCTGTAAATAATGCAAAGGCAATTTCCACCACTTCCACACGCTCCTCATTTAGGATTCCTGACTCTTTGAACTTCTCCTAGACCCCTGTGAAGAAGGGCTGGAAGACTCAGGATCACATTTGTGATTTGCTGTCATAATGTAATGGCCAGTCCTGGGTGCTGAGACCTCAGTGTTATCTGGGGTTTTCCGCACTGTCACTGACAGGTGGCCTCTGAGGAAAGGGACAAACTCCATGAAGTTGGCTATTTCTTCCATTTCCATAGGACCAGTATGAAAGGCCGTGATCACTGCCCATCCCAACCTAGGAAATTCACAAGACTCCTATACACTTGCAAATCCAGGAAGGATCTTGGGAGACGTCCTTCATCACTTCTGATATAGAGCTGCTATTGAGAAATAGACAGCTTGCAAGTCTTCCTCAGTTCTACCAAGAAGTTTTCCAGAAGTTGAATGAGCAGGGAATGTAGCACCAGTAGACTTTTGGGCAGCGGGGCACCATATAACCTCTCTGTTGCTTAATGTACACTCTGTCCTCACCTCCCTGTGGCATCACACATCACTGACCCCGTAGAATGATGGACGGCTTGGTAAAGGGAGGTGAATTCCCCTAGCATGGACAGCTCTCATGTGCCTAATACTTTCCCTGTCTCTCCCTCTTCCCCACTCCATGCAGGTCATGTAATTCTGATGGGGGAGAATGGGAACTTAGGCTGTCACTCTCTTTCCAGCTTGCTTCCTGGGAGTATGCTTTCTTAGAAAGGTCCCTCTCATGAGGGCCATCTTGGCTGATCAGCCGCTTCCTTCTTGATGTTTTGGGATTGAAAATGGAAGCGAAAGTGAAGCTGAGAAGATGACTGTGAACATCTGGTTTATGGAGAACCTTCCTTCAAGGTGACTTCATGGTACCCTGGTGCTGCTCTTGGAAGTACATCAGGAAACTCTTCCTTGGATGGTGAGTGAGATGCAGGAAACCTTTTTCTGGCTGCCCAGGAAGAAGCTGACTTTGGCCCAAGACTGTGGTGCCAGGGAGATGGAGCCTCAGCAGAGAGACCAGAAAGTGGAAGAGGAGCCTGGGAGGTGCTGGTCTCTTGGTAGACTGAATCAGAGAGAACGGGCTGGAGGTCACTCGGGGTGATTGACAGCCGATGGATTTGGATTCAGTGCAGAGTTCCAAAGCTTTCAGCTGGACTAAATGAAGCCACACAGGTGTGGGTTCTGCAGCACAGGTGACTGAGGCCTTGGTGGAAGCTGTCTCGTCCTGGGGGAAGGATGGGCCTCTTTAAATGTGAGGGTATTCCACGTTTGCATTCTCGTCCAGCAGCTTCATGAATCTCTTCCTTCCTCGGCTACAGCTACAACAGGCCAAGAAGGCTCTTGAGTCCCACTGGCTGTTAGGGTCCGCTGCCCTGCTGTGTATCTATGAGCATTTGTGAATGAGAGTTGATGTGTCTGTATAAACCATCAAGGAGAGAGAGAACACAGGACTCCTGAAGAGACCTGTGGAATTTCATGTTCAAGAACTCTGCAGCCTTATGTGGGTGTTCCTAGTTAGATCGGGTAGTATTCCCCCGTCCTCATTGGTGAAAAACCATCCTTAGCTTACGCTGCCAGAATTAATTTAATGATCAAATTCTCAAACAGGGTATTTCCAACGTTGTTTACATACAAAACGTGCATCTGCTGCCAACTCTACTGTCGAACATGAAGGGCATGTAAATTGGAACAGCACTGAGTTACAGAAACATGAAACGTTCTAAGAGGGGCCTTTTTACCACTTCCACTGTCCCCAGGAGAAAAGTCTGAACAAGACTGTTGTACCGGGGAGCCTAGGGTTCTTCCCAAACTACTGGTGGAAGGAAGGCAGCAGATGGTGATGTCATGGAGCCTGGTGACTTCCTCCCACGATGGGGAGGTGTGACGGACCCAGCTTGGGTATCCCGAAATTTGCCACTAAGTGAAGGGTGGGTGGGTTTGTGTTTGTATGTAGAGGAACGTGATAGCTATGTTTATGGTACTCCCATGGAGAGAGAGAGAGTGTGTGTGTGTGAGAGAGAGAGAGAGAGACAATTAAGAGCACTAGACTAGTACACCACAGAGATGATCTTCCCATGGGTGGAGCTTTCCTCACACCCTTTATGTTCTGCTTCCCACAAGTGGCACAGGGCTCTCTGCTCTGATGCTTCTTTCAGGCACTTTGGTCATGCCAACCCAGATTCTGGTCTGTGACGAAACAAAGAGAAATGTTTACAACATCTAGAGCAATATCCGAGCATACCTCATCCTTGACCTTCCCCATCACCCTGTCCCGCCCGCTCCCCTGCCCTCTTCACAAGCCCTCCTCTGCCTCCTTAGGGGGGCATCCCCAGGGGCCACTTCTCCCATTTGCCGTCTTCCTTGGCGCCTTGTGCCGGGCTTGTGCTGTGGCCTGCCTTCCGGGCGCAAGCCGTGCAGTGGGCCGGGCAGAGCTGTGACGTTTAGGGCTGCTCTCCTCCCTGAGTGGCCTTTCAGCCCCACATGAGTCGTAACCGATTTGGGGGCTGGTGTGAGATTTCCTGTCGCCCTCGCTAAACCAAATACAACATCATCAATGACAACCCTTCAGAGCTCTGGGCACCTCTGGGGTGAGGAAGGATCCCCGAGCAGCATCTATTATGAAACCTGAGGATGTGCAGGGGTTACCCAGAAAGCCTGTTACAATTGCTAATTCCCAGCTTCCACACCCAGAGATGCTGATCTGATAGATCTGGGGTGGAACTCAAAAATCTGCATTTTTAATAAGTTCCCAGGTACGTAGTGGCTTGTGAACCATACTTTGAAAAAAGATGGTCTAAGACAGTGGTCTAAGACAGAAGCTCTCCCCCTTGGCTGTTCAGTGGAACCACCCGGAAAGTTGAAAAAACCCAAATGTCCAGATCCCACCCCAGACAGCTTGGGGTTGGAACTCAAACATCAGTAGTTTTTAAAGCTCCAAAGGTGAATTCAATGTGCAGATGAGGTTGGGAAGCTGGACCCGAGGAATGGGGAGGGAGGGGTGGTGGTCTCCAGCTGGTCTCAGAGGGCTAGAGCACACCCAGCCACAAACAAGCACAATAACCAGGAACCTGCCAGCCCTGAATCTGACTCCTAGGGTGGCTGTCTCTGTGCCCTCTCTGACTTGCTCTTTTGAGATAAAAATATTTCTGTCCCAGCTGCATGCATGGGGTATGCCAATGGTGGGGGCTGAAGGGGTCCTTGGGGTTTTCTATGGCTCCCGGCTCTTGTTCACAGGGCTTCCTCCAAGCTTGCCTCGTGGGCTGCTTCTCTGTTTTTTGTTTGTGTTCATGCACTCATGTGCTTGCTCATTTCATGTTAGGCTGTGCCTCTGTGCCCAAGACCATGAAACATGGGAGCTGGTCTTAGGTAGCGGGTGAGGAGTGCATAGCAGTAATAATAGTGGTAGCATGACAGCTTCAGATTTCTCAGTGGAGGGTGTCACACCCTCAGAAGTGCAAGCTCTTTGAGGCTTTCTCTGCCAAGGCCGCCGTGGGGTTTGGGTTGTTGCTCTGCGCCCTCACCATTCCCTTGTTGGTCTCAAGCCGGGTGGGCAGCTGGGAAGCTCCTAGTTGATTTTACTCTCTGGTGCTCTCTGCAGAACTTGCTGCTCTGGATTAACCAAAGCTGTGAATGGCTCTCCGCCCAACCTGCAGGCCCAGCCGCTGGGTGCAGGCCCTGGGCACGTGTCCCCAGCACGGCCGGGTATCCAGGTGTGAGGGCAAGGCGTGAACTCACTGTGGTTGAGCAGCGGGGCTGCGGGTGGGATGAAGACAAGCTGCTCCTGTGGCATCTGCTTCTCCATAAACCGGAAAGGAGAGGTGGTGAGTGGTGAGTTCAGAGGCAGGATGTCTCCCATCATCGAGAGCACCCAGACCTCTCCTGACCCCTGTCTGTGCCCACTTCCCAGCCAGGCAGAGGAATTAGTGATTTTCCATCTGAGGCTCTCTTGCAATCTGCCAAGCATTAGCCCTCTTTAAATCTGCATCCTCCGTTTTGAAAGCAAAAGAGGTGGCGAAGTCACCCCCTGGCACGGGGAGCCTGTGCCACTTGGCATGAGACTGAGAAGGAAGAAGCCAAGCGCGGAGATGTCTTCCTGTCCCTGCGACCTCGCCGAATCATGCGATGCCGTGGTCCAAGTCGGCAGGATGAGGCCACTGGCCGTCCCAGCTGTGGGGGCCGGGTCCTGTCGATACACTGGTCCCCTTCCTGCTTCTTCCTCCCTTCTGCCCCTTGGCTCCCTCCCCTCTTCCAAAGACAGAACCGGTGGCTGGGCTTGTGTGCCCTCCGGGCGAGGCAGCGTTAGCTGCCGAGTCACGGGGCGCAAGCGCATCTGTAGCAGCTCATCCTCATTGAATTGTTTCATTACTGTGCAAAGTGGAATAATGTCATTCACCTCTACTATAAACAAGGCTGTGAGAACATAATAAACCAAACCTGAACACGCTGC EMBV3_32151 AGAATCTTCGGAAAGACAATAAAGGAGAAGCCAAGGCAGAGTTCCGCCGAGTCCTGCTGC Gene GeneID:523503|MAN2B2:XM_002688412:120_cdna Constitutive 0 NULL GeneID:523503 6 GENE MAN2B2 NULL mannosidase, alpha, class 2B, member 2 EMBV3_23842 TAAGTCTTCGGACTACCATCTTCTCCACCATCCAGCCCCACCCATCGCCAGAGAGAAACA Gene BVV0102_114522 + 0 NULL GK000025.2:3044581-3050213 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145999 TCONS_00146002 TCONS_00146000 TCONS_00146001 1 XLOC_088994 Coding TCONS_00146001 XLOC_088994 Coding Coding CREBBP 25:3048846-3169286 j TSS109277 10013 1 TCONS_00146001_9 2445 31 0.917119869809613 0.000657190907738021 0.000667138785782805 0.000104434775408128 0.000593335446204617 4.22078939179689e-05 7.75817672822156e-05 6.68632625003727e-05 0.000107394774289755 0.000242247039288114 9.46940013980714e-05 3.19566878088279e-13 4.6654957862993e-06 5.4161308760393e-05 3.81066074450739e-05 2.04912869554537e-05 0.000320973741519997 0.000504907561877321 1.12438249723853e-10 1.38889638198152e-05 7.91915369208953e-05 8.8094946693944e-05 1.34667647047558e-05 5.12905505379651e-09 0.000109485080330643 0.000404114420889492 0.000277965568293583 0.00039681364330618 2.436582759417e-05 0.000141153075420843 5.67328115758205e-11 NM_001164022.1 CREBBP Bos taurus CREB binding protein (CREBBP), mRNA. 0.0 1.530e+04 99.65 0.85329072206132 NM_004380.2 CREBBP Homo sapiens CREB binding protein (CREBBP), transcript variant 1, 0.0 1.167e+04 89.56 0.867771896534505 TCONS_00146001_9 sp|Q92793|CBP_HUMAN CBP_HUMAN CREB-binding protein; 0.0 4169 94.05 0.99959100204499 7 coding 0 0 0 0 -1.60012540400536 0.00598934395782298 -0.133365459068639 0.0417141735014659 CTGCGCCCTCCCTCTCCCTCGGCGCTCGCTCGCGGCTCGCGCTCGCTCCTCTCCCCTCGCAGCCGGCCGGGGCCGGCGCCGACCCCAGCCCCGGAGCCCTTGCCGACCCGGCCGCCCGCGCTCGGGGCTGTTTTCGCGAGCAGGTGAAAATGGCCGAGAACTTGCTGGACGGACCGCCCAACCCCAAACGAGCCAAACTCAGCTCGCCCGGCTTCTCGGCGAATGACAGCACAGATTTTGGATCATTGTTTGACTTGGAAAATGATCTTCCTGATGAGTTGATCCCCAATGGAGGAGAATTAAGCCTTTTAAACAGTGGGAACCTCGTTCCAGATGCTGCTTCCAAACATAAACAACTGTCCGAGCTCCTGCGAGGCGGCAGCAGCTCCAGCATCAACCCGGGAATAGGCAATGTGAGTGCCAGCAGCCCCGCGCAGCAAGGCCTCGGCAGCCAGGCCCAGGGGCAGCCCAGCAGTGCCAACATGGCCAGTCTGGGTGCCATGGGCAAGAGCCCTCTGAACCAGGGAGATTCTTCCGCCCCCAGCCTGCCTAAGCAGGCAGCCAGCACCTCCGGGCCCACTCCTCCTGCTTCCCAAGCACTGAATCCGCAAGCACAAAAGCAAGTGGGGCTGGTGACCAGCAGCCCTGCCACGTCGCAGACGGGACCTGGGATCTGCATGAACGCAAACTTCAACCAAACCCACCCAGGCCTCCTCAATAGTAACTCTGGCCACGGTTTAATGAACCAGGCCCAGCAAGGACAGGCGCAGGTTATGAATGGATCTCTTGGGGCTGCTGGCCGAGGAAGGGGAGCTGGGATGCCATACCCTACTCCGGCCATGCAGGGGGCCACAAGCAGTGTGCTGGCTGAGACGTTGACCCAAGTTTCACCGCAAATGGCCAGTCACGCAGGGCTGAACACCGCACAGGCCGGAGGCATGAGCAAGATGGGAATGACTGGTAACACAAGTCCATTTGGACAACCCTTTAGTCAAACTGGAGGGCAGCAGATGGGAGCCCCTGGAGTGAACCCTCAGCTGCCGAGCAAGCAGAGCATGGTCAACAGCTTGCCTCCGTTTGCCGCAGACATCAAGAACGCTTCAGTCACCAACGTGCCAAACATGCCTCAGATGCAAACATCAGTGGGAATTGTACCCACCCAGGCGATTGCAACGGGCCCCACCGCAGATCCCGAAAAACGCAAACTGATACAGCAGCAGCTGGTCCTACTGCTTCACGCTCATAAATGCCAGAGGCGAGAACAAGCCAATGGAGAGGTCCGGGCCTGCGCACTCCCACATTGTCGGACCATGAAAAACGTCTTGAATCACATGACGCATTGTCAGGCTGGGAAGGCTTGTCAAGTTGCCCATTGCGCATCTTCACGACAAATCATCTCTCATTGGAAGAACTGCACACGGCATGACTGTCCTGTTTGCCTCCCTTTGAAAAATGCCAGTGACAAGCGAAACCAACAAACCATCCTGGGGTCTCCAGCTGGTGGAATTCAAAACACCATTGGTTCTGTTGGCACAGGCCAACAGAATGCCACTTCTTTAAGTAACCCAAATCCGATAGACCCCAGCTCCATGCAACGAGCGTATGCTGCTCTTGGACTCCCCTACCTGAACCAGCCCCAGACGCAGCTGCAGCCTCAGGTTCCTGGCCAGCAACCAGCACAGCCTCAAACTCACCAGCAGATGAGGAGTCTCAACCCCCTGGGAAATAACCCAATGAACATTCCAGCAGGAGGAATAACAACAGATCAGCAGCCATCAAACTTGATTTCAGAATCAGCTCTTCCAACTTCCCTTGGGGCTACAAACCCCCTGATGAATGACGGCTCAAACTCTGGAAACATTGGCACCCTCAGCACTATACCTGCAGCAGCACCTCCTTCCAGCACCGGAGTTCGGAAAAGCTGGCACGAACACGTCACTCAGGACCTGCGGAGCCATCTAGTGCATAAACTTGTCCAAGCCATCTTCCCGACACCTGACCCTGCAGCCCTGAAGGATCGCCGCATGGAGAACCTGGTGGCCTACGCTAAGAAAGTGGAAGGGGACATGTACGAGTCTGCCAACAGCAGGGATGAATACTATCACTTACTAGCAGAGAAAATCTACAAGATTCAAAAAGAGCTAGAAGAAAAGCGGAGGTCGCGTTTACACAAACAAGGCATCTTGGGTAACCAGCCAGCCTTATCAGCCCCCGGGACGCAGCCCCCTGGAATACCCCAGGCGCAGCCTGTGAGACCTCCAAATGGGCCCATGCCTCTTACAGTGAATCGTATGCAGGTTTCTCAAGGGATGAATTCATTTAACCCAATATCCTTGGGGAACGTACAGTTGCCACAAGCGCCCATGGGACCGCGTGCGGCATCCCCCATGAACCACTCTGTCCCGATGAACAGCATGGGCTCCGTTCCAGGGATGGCCATTTCTCCGTCCCGAATGCCTCAGCCTCCGAACATGATGGGCGCGCACGCCAACAGCATGATGGCCCAGGCGCCTGCGCAGAGCCAGTTCCTCCCGCAGAGCCAGTTCCCGTCGTCCAGCGGGGCGCTGAGTGTGAGCAGCGTGGGCATGGGGCAGCCGGCGGCGCAGGCTGGCGTTCCACAGGGGCAAGTGCCAGGGGCCGCTCTTCCCAACCCCCTGAACATGCTTGGGCCCCAGGCCAGCCAGCTGCCTTGCCCACCAGTGACACAGCCTCCGCTGCATCAGACCCCGCCTCCCGCCTCCACGGCCGCCGGCATGCCGTCTCTGCAGCACCCAGCAGCTCCCGGGGTGACGCCCCCCCAGCCAGCTGCGCCTACCCAGCCTTCAACTCCCGCGTCGTCTTCCGGGCAGACTCCCACCCCGACTCCTGGCTCCGTGCCCAGCGCCAGCCAGACGCAGAGTACTCCTACGGTCCAGGCAGCCGCCCAGGCCCAGGTGACCCCGCAGCCTCAGACCCCAGTGCAGCCTCCATCCGTGGCCACCCCACAGTCATCGCAGCAGCAGCCAACACCTGTGCACACGCAGCCCCCCGGCACCCCGCTTTCCCAGACAGCAGCCAGCATTGATAACAGGGTCCCCACTCCATCCTCAGTGGCCAGCGCCGAAACCAACTCCCAGCAGCCAGGCCCCGAGGTGCCACTGCTGGAGATGAAGGCTGAGATCAAGACCGAGGACACAGAGCCCGATGCTGGGGAGCCCAAGGGAGAGCCTGGGGCTACGATGATGGAGGAGGACTTACAAGGATCTTCTCAAGTTAAAGAAGAAACAGACCCGACAGAGCAGAAGTCAGAACCAATGGAAGTGGATGAAAAGAAAACTGAAGTGAAGGTCGAAGCTAAAGAGGAAGAAGAGGGCAGCACCAATGGGACAGCCTCTCAGTCCACGTCCCCTTCGCAGCCTCGCAAGAAAATCTTCAAGCCGGAGGAGTTGCGCCAGGCTCTGATGTCAACCCTGGAAGCTCTGTACCGACAGGATCCAGAGTCCTTACCCTTTCGGCAGCCTGTGGATCCCCAGCTCCTGGGAATTCCAGATTACTTTGACATTGTGAAGAATCCCATGGACCTTTCCACCATCAAGCGTAAGCTGGATACAGGGCAGTACCAGGAGCCCTGGCAGTATGTAGACGACGTCTGGCTCATGTTCAACAACGCCTGGCTTTACAATCGGAAGACATCCCGGGTCTACAAGTTCTGCAGCAAACTTGCAGAGGTCTTTGAGCAGGAGATTGACCCCGTCATGCAGTCCCTTGGGTATTGCTGTGGACGCAAGTATGAGTTTTCCCCACAGACTCTGTGCTGCTATGGGAAGCAGCTGTGTACAATTCCTCGAGATGCTGCCTACTACAGCTATCAGAATAGTTCACCCAAGTATGGCCTTCTTGCTGACAGGTATCACTTCTGTGAGAAGTGTTTCACAGAGATCCAGGGGGAGAATGTTACCCTGGGTGACGACCCTTCACAACCCCAGACGACAATTTCAAAGGATCAGTTTGAAAAGAAGAAAAATGATACCTTAGATCCTGAACCTTTTGTTGACTGCAAGGAGTGTGGCCGGAAGATGCATCAGATTTGTGTTCTCCACTACGACATCATCTGGCCCTCAGGTTTTGTATGTGACAACTGCTTGAAGAAAACGGGCAGAACTCGAAAAGAAAACAAATTCAGTGCTAAGAGACTACAGACCACACGGTTGGGAAACCACCTGGAAGACCGAGTCAACAAGTTTTTGCGGCGACAGAATCACCCTGAAGCTGGCGAGGTGTTTGTCCGTGTGGTGGCCAGCTCAGACAAGACAGTGGAGGTCAAGCCAGGGATGAAGTCACGGTTCGTGGATTCTGGGGAGATGTCGGAGTCTTTCCCATACAGAACTAAAGCACTCTTTGCCTTTGAGGAGATTGACGGGGTGGACGTGTGCTTCTTTGGGATGCACGTCCAGGAGTACGGCTCTGACTGCCCCCCGCCAAACACAAGGCGTGTGTACATATCTTATCTGGACAGTATTCATTTCTTCCGACCCCGATGCCTCCGAACAGCCGTTTACCATGAGATCCTTATTGGATATTTAGAGTATGTGAAGAAATTGGGGTATGTGACAGGGCACATCTGGGCCTGTCCCCCGAGTGAAGGAGATGACTACATCTTCCACTGCCACCCCCCTGATCAAAAAATCCCCAAGCCGAAGCGCCTGCAAGAGTGGTATAAGAAGATGCTGGACAAGGCCTTCGCCGAGCGCATCATCCATGACTACAAGGACATTTTGAAACAAGCAAATGAAGACAGGCTCACCAGCGCCAAGGAGCTGCCCTACTTTGAGGGGGACTTCTGGCCTAACGTGCTGGAGGAGAGCATTAAGGAGCTGGAGCAGGAGGAGGAAGAGAGGAAGAAGGAGGAGAGCACCGCGGCCAGCGAGACCACAGAGGGCAGCCAGGGCGACAGCAAGAACGCCAAGAAAAAGAACAATAAGAAAACCAACAAGAATAAAAGCAGCATCAGCCGCACCAACAAGAAGAAGCCCAGCATGCCCAACGTGTCCAACGACCTGTCCCAGAAACTCTACGCCACCATGGAGAAGCACAAAGAGGTCTTCTTTGTGATCCACCTCCACGCTGGGCCCGTCATCCATACGCTGCCCCCCATCGTCGACCCTGACCCCCTGCTCAGCTGTGATCTCATGGACGGGCGGGATGCCTTCCTTACGCTGGCCCGGGACAAGCACTGGGAGTTTTCCTCCTTGCGGCGCTCCAAGTGGTCCACGCTGTGCATGCTGGTGGAGCTGCACACCCAGGGTCAGGACCGCTTCGTCTACACCTGCAACGAGTGCAAGCACCACGTGGAGACGCGCTGGCACTGCACCGTGTGCGAGGACTACGACCTCTGCATCAACTGCTACAACACGAAGAGCCACACCCACAAGATGGTGAAGTGGGGGCTGGGCCTCGACGACGAGGGCGGCAGCCAGGGCGAGCCGCAGTCCAAGAGCCCCCAGGAGTCGCGGCGCCTGAGCATCCAGCGCTGCATCCAGTCGCTGGTGCACGCCTGCCAGTGCCGCAACGCCAACTGCTCACTGCCGTCCTGCCAGAAGATGAAGCGGGTGGTGCAGCACACCAAGGGCTGCAAGCGCAAGACCAACGGCGGCTGCCCGGTGTGCAAGCAGCTCATTGCCCTCTGCTGCTACCACGCCAAACACTGCCAAGAAAACAAGTGCCCCGTGCCCTTCTGCCTCAACATCAAACACAAGCTCCGCCAGCAGCAGATCCAGCACCGCCTGCAGCAGGCCCAGCTCATGCGCCGGCGGATGGCCACCATGAACACCCGCAACGTGCCTCAGCAGAGCCTGCCTTCCCCTACCTCAGCGCCGCCCGGGACCCCCACGCAGCAGCCCAGCACGCCCCAGACGCCGCAGCCCCCCGCCCAGCCCCAGCCCTCGCCTGTGAGCATGTCACCAGCTGGCTTCCCCAGCGTGGCCCGGACTCAGCCACCCACGACGGTGTCCACCGGGAAGCCCACCAACCAGGTGCCCGCCCCGCCGCCCCCCGCCCAGCCCCCACCCGCGGCGGTGGAGGCGGCCCGGCAGATCGAGCGGGAGGCCCAGCAGCAGCAGCACCTGTACCGGGTGAACATCAACAACGGCATGCCCCCGGGGCGCACGGGCATGGTGACCCCGGTGAGCCAGATGGCCCCCGTGGGCCTGAACGTTCCCCGGCCCGGCCAGGTCAGCGGGCCCGTCGTGCCCACCCTGCCAGCCGGGCAGTGGCAGCAGGCGCCCATCCCCCAGCAGCAGCCGATGCCGGGCATGCCCCGGCCCGTGATGTCCATGCAGGCCCAGCCAGCCGTGGCCGGGCCCCGGATGTCCGGTGTGCAGCCGCCCCGGAGCATCTCGCCCGGCGCCCTCCAGGACCTGCTGCGGACCCTGAAGTCGCCCAGCTCCCCGCAGCAGCAGCAGCAGGTGCTCAACATCCTCAAGTCCAACCCTCAGCTGATGGCAGCTTTCATCAAACAGCGCACGGCCAAGTACGTGGCCAGCCAGCCCGGCCTGCAGCCACAGCCTGGCCTCCAGGCCCAGCCCGGCCTGCACCAGCAGCCCGGCCTGCAGAACCTGAACGCCATGCAAGCCAGCGGGCCGCGGCCTGGCGTGCCTCCGCAGCAGCAGGCCATGGGTGGCCTGAACCCCCAGGGCCAAGCCCTGAACATCATGAACCCGGGCCACAACCCCAGCATGGCGAGTATGAACCCGCAGTACCGAGAGATGCTGAGGAGGCAGCTCCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAGCAGGGCAGCGCCGGCATGGCCGGGGGCATGGCAGGGCACAGCCAGTTCCAGCAGCCCCCAGGCCCTGCGGGCTACCCCCCTGCCATGCCGCAGCAGCGGATGCAGCAGCACCTCCCCATGCAGGGCAGCGCCATGGGCCCGATGGCGGCTCAGATGGGGCAGCTCGGCCAGATGGGGCAGCCCGGGCTGGGCGCAGACAGCACCCCCAACATCCAGCAGGCCCTGCAGCAGCGGATTCTGCAGCAGCAGCAGATGAAGCAGCAGATGGGGTCCCCGGGCCAGCCGAACCCCATGAGCCCCCAGCAGCACATGCTCTCAGGACAGCCTCAGGCCTCGCACCTCCCCGGCCAGCAGATGGCCACATCCCTCAGTAGCCAGGTGCGGTCTCCGGCCCCTGTCCAGTCTCCGCGGCCCCAGTCCCAGCCTCCACATTCCAGCCCGTCGCCACGGATACAGCCCCAGCCTTCACCGCACCACGTCTCGCCCCAGACTGGTTCCCCCCACCCAGGACTCGCAGTCACCATGGCCAGCTCCATAGATCAGGGACACTTGGGGAACCCCGAACAGAGTGCAATGCTCCCGCAGCTGAACACCCCTAACCGGAGTGCGTTGTCCAGTGAGCTGTCCCTGGTCGGCGACACCACGGGAGACACCCTAGAAAAGTTTGTGGAGGGTTTGTAGCATTGTGAGAGCATCACTTTTTTTTTTCCCCTTTCATGTTCTTGGACCTTTTGTACTGAAATCCAGGCATCTGGGCTCTTTTTATTCCTAGATGGAACTGCTACTTCCAAGCCATGGAAGGGTAGATTGCTGTTTAAAGAAACAATACAAAGAATATATTTTTTTGTTAAAAACCAGTTGATTTAAATATCTGGTCTCTCTCTCTCTTCTCTCTCTTTTTGTTTTTGTTTTTTCGTTTTTGTTTTTTGTTTTGGGGGGAGGGGGGTTTTGTTTGGATTCTTTTGTCGTCATTGCTGGTGACTCATGCCTTTTTTTAACGGGAAAAACAAGTTCATTATATTCATATTTTTTATTTGTATTTTCAAGACTTTAAACATTTATGTTTAAAAGTGAGAAGAAAAAAAATAATATTCAGAAACTGATTCCTGAAATAATGCAAGCTTATAATGTATCCCGGTAACTTTCAGACGTTGCGGGAAGATTTTTTCTATAGTGAACTCTGTGGGCGTCTCCAAGTATTACCCTGGACGCTAGGGATTGGCTCCTGCGTGCACACACGTACACACCCACACACACGTCTATCTATACATACTGGCTTAAGCCAAACTCTTGTCTTGCAGATGTAGAAATTGTTGCTTTGTTTCTCTGATAAAACTGGTTTTAGACAAAAAATAGGGATGATCACTCTCTTAGACCATGCTAATGTTAATAGAGAAGAAGCATTCTTTTCTTTCTTCTATGTGAAACTTGAAATGAGGAAAAGCAATTCTCGTGTAAATCATGCAAGCGCTATAATTACTATAAATAAGAAAATTCAAGAAGATCCAATCACTGTATAGAATGGTAAAGCACCAACTCATTTCTTATATCATATTGTTAAATAAACTGTGTGCAACAGACAAAAAGAAGGGTGGTCCTTGAATTCATGTACATGGTATTAACACTTCGTGTTCGGGGTCTTTTGTTATGAAAATGCTGTTTTCAACATTGTATTTGGACTATGCATGTGTTTTTTTTCCCCCCATTGTATATAAAGTACCGCTTAAAATTGATATAAATTACTGAAGTTTTTAACATGTATTCTGTTCTTTAAGATTCCTGTAAGAATGTTTAAGGTTTTTATTTATTTATATATATTTTTGGAGTCTGTTCTTTGTAAGACATGGTTCTGTTTGCTCACGGAGGAGAGGCGGGGGCTGTGGTCCTGCCGGCTGTTGGGGGAGCAGCTGGGCTCGGCTGGGGCCCCGCAGGTCCTGCTTGGCTGCCAACAGAAGAGCCCCAGCCAGAGCTGGGGGCACCAGTGGGCCTGAAGCAGCACTTTGTCTCCCGTCCACTCCCCGTCCTAGCCACCCCCACCCCCACCACACCCCAGTTCCTACCTGCCAGTCCCAGAGCTCCTGCAGAGGGTGTCTTGGGGACTGGAGGGAGTCTGCGGCCCGCCCCTCACCCTGGCTTAGCAAGGGAGGATGCCATCACGGCCCCCTGGGCTGGGCTGGGCAGACGGGGCGCCGGCCCACCCTTGCCCACATGAGGGGCTGCTCTGGGGGCCGTTGGGGGCACGGCGCAGAGCACTGAATGCCAGCCCCACCGTGATGAGAAGAGGCCTCCAGCTTCGAGCGACGCTTGCACTTGGCCACCACCCGGTCCTTCCCCTATCTCTGCTCCGGTTCCAGGGGTCCTTACTGAGGGGGTGACACGCAAGGTCCTGAGCACTGTAGAAATGACATCTCAGAAGAGGGCCACCAGCAGGAGAGCTGAAGTGCCTTCTCTGGTCTGCGTAGTCCCGCCCTGCCTCCCATTCCCTCGGCCCCCAACCATGGGGGTCTAGGTCTAGGGTCGTGATGTTCAACTTGGAAATCATGGCCCAAATAGCTCTCCTTTTGGCCCTGAATTCATAGAAATATTTCCAAAATAATGTGAGTTGAGAGTGTAAATTTGAGGAAACTCTCTTAAGAACTGAGTTGTGACACAGCTTTGAATCTTGTTCTAATATTGTACATCTAGTCAGGTAAGTCTTCAGACTACCATCTTCTCCACCATCCAGCCCCACCCATCGCCAGAGAGAAACAAGGCCAGACCCAAGGCCACATGCCATCCCTGCTCCAGCCCCTCTCCCTGGTTCTACAGCCTTCTACAGCGATGAGAGCGCCCTGGGCTGTCTGTGTTCACACAAGAAGTGTGGGCCTTCTGGGCCCTGGAGAAGCAGCTTCAGGCCCACACTCCAGATGCACAGCCCTTTAATCTGGCCAGTGGGGAGTCTCTTTTAGGTCATCCTGGAGTCCAAAGTTCTGTACTGACCTCATCCTCTTGGAAGTCCCATGCAATCTTGTTGCCAAAGGATGCGGCCAAGGGTGTGGTCCGGATGCTAACCCGGCACTTGGCACAAGGAAGTTTCTGTGTGAGCCGGAAAGCCCTGACACGGTATCTCACGTGCTGTCTACTTAAAAGAAGATAAAAGCCCTATATTTGTAATCAAAAAGAGGAAACTTGAAATGTGCTGGTGTTTATAATAAAAGCTGGTAAAAC EMBV3_19031 ACTGCCCACACCGAAGCTCTGCTGCAGCAGGGGGGCTGGACTACCTGGTGCTGAACCACC Variant GeneID:404546|HSD11B1L:NM_206969:21_cdna 327^438 2 EMBV3_42630 GeneID:404546 7 GENE HSD11B1L 11-beta-HSD3 MGC157172 hydroxysteroid (11-beta) dehydrogenase 1-like EMBV3_03294 GTCGGCTGCCGCCATGATGACCTACTTCAAGCCGCTGCTGGACTGGCTCGTGACGGAGAA Gene GeneID:509484|ACE:XM_002696092:141_cdna Constitutive 0 NULL GeneID:509484 19 GENE ACE NULL angiotensin I converting enzyme EMBV3_02051 TACTTGTTGGTTCTAGGATCTTCAGAGGCCAGAGACTCAGGAGAATGGTGAGCAAGGAGG Gene BVT0102_169509 + 1 EMBV3_39255 GK000002.2:46759005-47068528 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24768 CCAGGGTGTCACCTTCCTTCCCATTCACTTGACCAGGAGTTACCAGATAAATTGTCTCTT Gene GeneID:540563|ASH1L:XM_002685976:295_cdna Constitutive 2 NULL GeneID:540563 3 GENE ASH1L NULL ash1 (absent, small, or homeotic)-like (Drosophila) EMBV3_43204 ACAGAGGTGACCGAAGCGCCCAACCTGTCATTGCAAAGTGCTGTAAACGTGTGCCTGGAG Gene GeneID:790124|LOC790124:XM_002687060:187_cdna Constitutive 0 NULL GeneID:790124 4 GENE LOC790124 NULL similar to vasoactive intestinal peptide receptor 2 EMBV3_29505 TCACAGGCAGCCAACAAGCAGTGAAAAGCAGTTATTACTCTAGAGGAAGCTATGGGACCC Gene GeneID:506917|HNRNPF:NM_001014860:5_cdna Constitutive 0 NULL GeneID:506917 28 GENE HNRNPF HNRPF heterogeneous nuclear ribonucleoprotein F EMBV3_36156 GACGCCATGTCTGTCTCTGTGTTCTTCGTGCTGTTTCTCATTACAACGCATCCCCAGGTT Gene GeneID:503858|LOC503858:NR_003052:30_cdna Constitutive 0 NULL GeneID:503858 10 PSEUDO LOC503858 NULL aromatase cytochrome P450 pseudogene EMBV3_42696 TCGGAGGACTTGGACTCGCCATGCTGGTTGCCTTAATTGAGTTCTGCTACAAATCCCGTA Gene GeneID:529618|GRIA1:XM_002689318:29_cdna UTR3_Alt 2 NULL GeneID:529618 7 GENE GRIA1 NULL glutamate receptor, ionotropic, AMPA 1 EMBV3_34423 AGAAATGACTTTGCATTCCCCCAGGAGGCGCTGGGCGGCAGCCAGTTGCAGAAGGCTCAA Gene GeneID:781732|LOC781732:XM_002689516:136_cdna Constitutive 0 NULL GeneID:781732 8 GENE LOC781732 NULL similar to interferon alpha G EMBV3_29585 ACAAAAATAGGAGTATGCCAGGGGCTATTAGAAGGCTCTATATGGCTGGCGGCTGTGAGG Gene BVV0102_088840 + 1 EMBV3_16810 GK000001.2:12796183-14790589 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16155 TCTTATAACAGATATCACCCCATGGGGGAGATCAGCCAACCATCCAGTAACCCCAAGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29934 ATCGCTGCTCGAGGAACTGAGTTCCCACATGACCCGGAGAAGAGCCAGGGTAGCCAAAAA Gene GeneID:789375|SNRPE:XM_002696005:409_cdna Constitutive 0 NULL GeneID:789375 19 GENE SNRPE NULL small nuclear ribonucleoprotein polypeptide E EMBV3_14704 ATTAAGAAAAGCAGGAGGGGAATCTTCATCTTGAGCCCCAACTACGTCAGTGGACCCAGC Gene GeneID:493716|IL18RAP:XM_002691183:86_cdna Constitutive 0 NULL GeneID:493716 11 GENE IL18RAP NULL interleukin 18 receptor accessory protein EMBV3_28753 GGGATGAGGAGGAAGAGTGGCTTTATGGCGATGAAAATGAAGTTGAAAGGCCAGAAGAAG Variant GeneID:100138550|FIP1L1:XM_002688273:26_cdna 263^307 1 EMBV3_03335 GeneID:100138550 6 GENE FIP1L1 NULL FIP1 like 1 (S. cerevisiae) EMBV3_09867 CCCCCATCCAGTCCCTTAGCCAGCCATTGGCAGCATTTTTAGCATTCTTCCAGAGGTATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11852 CGTTAAGAAGGAGGTAGATGACGCCTTAGTTGAAATGCACTGGGTTGAGGGCCAGAACAG Gene GeneID:509278|METT10D:XM_002695691:262_cdna Constitutive 1 NULL GeneID:509278 19 GENE METT10D NULL methyltransferase 10 domain containing EMBV3_34918 CTAGTCCCTAGAGAAGGGGCTCCTCACTCATTCCCAGACCCAGAAAGCTAAATCAAGTGA Gene GeneID:521015|HEPACAM:NM_001031759:23_cdna UTR3_Alt 2 NULL GeneID:521015 29 GENE HEPACAM FLJ25530 hepatocyte cell adhesion molecule EMBV3_20005 TTCAGCAACTGGTTCAGTATTGATGGAAGTGGAGAATGTGCCTGCATGTTTCAGAAGGGC Gene GeneID:784329|LOC784329:XM_002687808:85_cdna Constitutive 0 NULL GeneID:784329 5 GENE LOC784329 NULL similar to RIKEN cDNA 4922502D21 EMBV3_17293 CGAGTGGAGGTGGATCAACTCAAGGAGATGCTGGAAAAAACTCAGGTCCCCAACTTTGTG Gene GeneID:522004|LOC522004:XR_084667:86_cdna Constitutive 0 NULL GeneID:522004 29 PSEUDO LOC522004 NULL similar to several ankyrin repeat protein transcript EMBV3_30204 GGCTTGGTTTCCAAACAAATATGTGCAGCAGCCTGTCATCATATCACCAGGAAGACATCC Gene BVT0102_019344 + 0 NULL GK000021.2:28221104-28261133 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123429 1 XLOC_074983 NonCoding TCONS_00123429 XLOC_074983 NonCoding NonCoding - 21:28223222-28226324 - TSS92188 3102 2 TCONS_00123429_9 117 1 0 3.50887253878899e-05 7.12655230572823e-05 0.000292356742187366 9.63731734556192e-05 2.06909547803479e-05 0 1.87998725009774e-06 3.81349294453379e-06 5.08713233221431e-05 0.000319662123909671 0.000304044109464265 8.76054314799828e-05 2.49744152661057e-05 0 1.58162293749355e-05 0.0051639710166623 0.00249676396973792 0.0119549932642297 9.24685073880698e-06 0.000122871061522595 0 0.00245322752057791 0.0024872200744402 0.00221402641272155 2.68025044560282e-05 3.86115273274579e-05 3.58877047408084e-05 0.00112710115511177 0.000690946014941693 0.00146526790778731 NM_015995.2 KLF13 Homo sapiens Kruppel-like factor 13 (KLF13), mRNA. 3e-152 544 70.18 0.384590586718246 0 noncoding 0 0 0 0 -0.051813985163694 0.730315745144434 -0.00259077647989776 0.957775541303092 CTCTCTGCACATAGGAAGAGGGGAAAGGACTCTAAACCCAGTCATCTTGGAATAAAAGAAGAGCTGGTTTGTTTTGGAGGGGGGAGGGGGGTGGGGGAGGGAGGGAAAGCGGGCGTTTGCTGTTCCCAAAGAGAGCACTTAATTTAATTTTTCCTCTAAGTGACCCAGGGCTGTTCCGTCTGCTAGATGGAAGGGTAACATTGCCTTAAAACAGAAATATGCAGGCGCGGGCTATTTTTGGCAGATGAGTGTGTCCTCGTTCCCAAAGCAGTTTTGGTCTAATGGCAGGGTGCGGACCTTCCGAAGTGGGCCTGGCTCAGGACACGGGCTGCTGCTTCTCTGCCTTTGGGCATCTGGAGAGAACTGGCTGGCACCTGGAGCTCTTGGCCTAGAGCTCCAGCCAGCAGGCCATCCTGGCTCATCTGAGGCTAAAATTCATCTCACTTGAAGGGTGGGGAAAATCCATGCATCTCAGGCTAGGTTCGAATGGGCTTTTGCTAGCATCTCATCATCACATGTGGAAGGAGGGAGTGCAGGGCCTCCCTCCCTCAGACCCCCGTGGGAAGTGGTTGCACGGTGGTGGGGGTGGGTGGAGGACACTGCTGAACAGCCTGCATTTTTTTTCTAAGAAGTAGAATGTCTTCCCGGCCCAGGTCTGTTTCAGGGTCTTTCATTTTTCTGGTTTATGGCCATGCTTGCTGGCTTCAGTGTGACAACTAGAAACAGTAGTGAAAACTCCAACCTTTGCGTGCTGACTCTAGTTCTTGTAGGCCAAGGGGGCAGAGATCTCAAAATGAAGGTTGCCGAGGTTCCCCTCCAAGAAGGCCTACAAGCGACCCTGGGCTCAACCTAGGGGCTGGTGTTTGGCCCTTGTCCCAAACAAGGAAGCCCTCAGCGTCAGCCATATTAGGGTTGTCAGCACCCCAAACGCCTACCCTGTTCTGTAGCCATGAGGAAAGATGAGCCCCTTCCACAGTGGGCCATGGGGTGCTGTGTGGGGATGGGCAGTGGTGCCCTTAATGGGAATGTGATCCTGCAGGTGCCTGCCTTGCACCCTGCTGCAGCCCATGCACCGCACTTGAGGTGCAGGGCGACCCCTTTACTCTGAGGCTAGGCATCCGGGCAGGTGCAGGATTCGCCAGGGTGCGGCCTCCAGGTGCACACTTCAGCAGCAGCACTGGAGTCCCCAGACCTCCCCATGCTCTTGGTCACAGCTTAGGGCGGGGTGGGAGGCAACTTAGAGGCAGGGACAGACAGCGGGCCATCAGTGGCCCCTAGCCTGTTTGTTGGGACATACGGACAGGGCTGGTGGCTTTCTGGGTCCAAGTGAAGTGCGGCAGAAGTGGGGTCTCCATGCAAGTCTCCTGCCCCCCAGCCCACTGTCCCCAGAAGATCCGGCCGCTTTTCTTGCCAGAAGCAGGGCTAAGGTGGCTGCCAGGTCAGAGCGCCCCAAGGGACTTGCTCCTTGAGTTCAGCGAGCGAAGGACCACCCAGCAGGGAAGCATGACCTGAGCAATAGCGTCCCCTTGATGCTCAGCTCCTGGTTTCGGCTGTGTTTACAAGGCTACCTGATTTTTTTTTACTTCTAACAGCTGTCACTTTTTTTTTTTTTTTTTAATTTTCTTAACCCTTTTACAAAGTCATTCAAAGACTCAGTGATGAAGGGTTTGAAGATTGATGGGTTGGTCACACTGCAACCAGTAAGAAATGCTCTGCAGGTCACCCACACCTTTGCTGTCCAAAGATCCCACATTCAATTCTGGTGACCGTATATCTTCCAAAGCTAAAACCAAGGGTGTGGGCCGAGACTTTTCTTGAATTCAGGATTGCCCTGGGGAAAGCCAGGTCCTGTAACTGATTTTCCTGACTCCAAGACTTGAGCTTCAAAGGTTTGTCCCAGACACATTCCAGAGAATTTTGTAGCAGAACTCAGACGCACCGTCCAGCTTACTACTGATAAATGCCTGAACACCGTTCAGGGAGAAGCCCTTCCTCCTGCCCACTACTCTGTCTCATCAGTTAGAAGAGTTGGATGTGGTGGGAGGCAGGAGCCCAGGGCTGTACTTGGTTTCTACTGAACTCTTCTTGCCATATGGGACTTGCAGTGCCCCCTGGCCCCGCCCAGCCTCTCCCCTTCTCATGCAGCTTTAAAACCTTACTACTTTTATTTAAAGAAGGACGGATGAGAGCAAGTTGCTTCCCCTACCCTGAACACCTTGCATTCCCTGTGGGGGACACAGGAGACATGGGGGGTTGGGGAGGGGTGCATGAGCAGCCTTCTCCCAGGGCTCCAGGATGTCTTCCTGGTGATATGATGACAGGCTGCTGCACATATTTGTTTGGAAACCAAGCCAAATACCTGCCAGGCAACCAGAGGTCTGGGTGAAGGCTGTCTCCCCTACTCAGCCCAGGAGCACCTGTCCCAGGCCAGCTTGCCATCCCTGGAGCAGGGGGCCACCTCCCAGGATCCATTCCTGGGTCAGGGTGCCTGTCTCTGGGCGTGTGGGCAGGAGGCTTACCTTGGAGAGTCCCTGTGCCAAGCACCGAGGACCCTGAGGGCTAGAGGGTAGCTGAGCAGCTGTGCATTGTTGGGGGTAGAGCCTTTATGGCTCCCACAGGCCAGGAATCCACCCGGGAATCTCTGTGTGCTGGGTGCACTAGGGGTCTCAGCAACCCTAGACTTAACAGATGACCCCTCCTCGTCCCAAAGCCATTGATGGAGCTTCTCTGGGATTGTTTGCCAAACCCCATGGTAGACTCCAAGGGTCCAAGACCATTTCCATCGAGCACACTTTTCTGTAGGAACTTTTGGTTTTGTTTTGTTTTTTTTAACCAGCACCACACCATGCTTCCGAAGGCCACGTCTCGTCTTTCCCAGATCACTACAGTGAAGTATTACAGTTGTACAGTTCCCAATCTGGCCTTGGCTTGCTCGGATAAAACTTTGTATGTATTTTGTAAGGCATAGATTCTATATTGTAATGATGTCCTATGCAAAAAGAAAAAAAAATTAACGAAACTGTAAATTTTATTGTTTTCACGTGTATGCATGTTTAGTGACGTTTACATTTTGAAATAAAATTTATGATTCATTATTTGCCA TCONS_00118981 . 3' 2120 TCONS_00118981 . 3' 5221 EMBV3_13685 CCTGAACTGCGTTGTGCCCCTTGGCTCTCCCCTGAATTATGGTTATGGATGCAATGGCTA Gene GeneID:100296254|LOC100296254:XM_002684613:87_cdna Constitutive 0 NULL GeneID:100296254 1 GENE LOC100296254 NULL hypothetical protein LOC100296254 EMBV3_04009 AGTTGGCTGAGGAACTGCAAGTCCAAATAAACAATCAAAGTGATCCTGAGGTAGGACAGC Gene GeneID:100124524|GPRASP1:NM_001102557:9_cdna Constitutive 0 NULL GeneID:100124524 X GENE GPRASP1 MGC159823 G protein-coupled receptor associated sorting protein 1 EMBV3_40446 AGCCTTCATCCCTCTCCCCAGTGCTGTGGTACAAGCTGTCTTTGGACGAGAACGTGCCGT Gene GeneID:520897|SDR39U1:NM_001075812:173_cdna Constitutive 1 NULL GeneID:520897 10 GENE SDR39U1 C10H14orf124 C14orf124 MGC140661 short chain dehydrogenase/reductase family 39U, member 1 EMBV3_33335 AAATGTCTGAGCTCCTGAGAATGGTGGGCCTCAAAGGGAGAGGATGCAGGAGAAGTCAGT Gene BVT0101_028819 + 0 NULL GK000011.2:3590999-3686195 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04144 GATTTCCCAAGTGGCTCTGATGCTCCCACTGCCTTTCTGTGGCCCCAACATCCTAGATAA Gene GeneID:788704|LOC788704:XM_002695592:140_cdna Constitutive 0 NULL GeneID:788704 19 GENE LOC788704 NULL similar to Olfactory receptor 4D2 (Olfactory receptor OR17-24) (B-lymphocyte membrane protein BC2009) EMBV3_36401 GAACATCATAACTGCATTCTCCTGGGCATTTTCCTGTGATCACCGAGCCAGAGGGGAGTA Gene GeneID:784318|LOC784318:XM_002684888:114_cdna Constitutive 0 NULL GeneID:784318 1 GENE LOC784318 NULL hypothetical LOC784318 EMBV3_04894 TTTCTGCCACGTGCCTCCGCTAATGAAGTTAGCCTGTGGAAATAATGTACTGGGAGTGGC Gene GeneID:527062|LOC527062:XM_002688587:307_cdna Constitutive 0 NULL GeneID:527062 7 GENE LOC527062 NULL similar to LOC508140 EMBV3_43663 ACTTTCAAGGTTTCTGCAAAGCTAGAGAAGCAAAACTGCAGTATTTCATGCTTCTGGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23930 CCCGCCCTCCAAGTCCAACCTCCGATCTACTCTGGCGCTGAAATGGATTAATAAGGAACT Gene GeneID:100337396|LOC100337396:XM_002692213:1425_cdna Constitutive 0 NULL GeneID:100337396 13 GENE LOC100337396 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_42415 GCACCTCAACACTGCTAGTCTGGGTCGGAGTCATCCGCTACTTGACCTTCTTCCATAAGT Gene GeneID:505738|MCOLN1:NM_001075222:306_cdna Constitutive 0 NULL GeneID:505738 7 GENE MCOLN1 MGC140594 mucolipin 1 EMBV3_08163 GATCTCATGACCCATCACTAGCTTCCTGATTTGTGCCTGTATTACTTGTTTACACAACTG Gene GeneID:100137993|LOC100137993:XM_002691005:322_cdna Constitutive 1 NULL GeneID:100137993 10 GENE LOC100137993 NULL similar to Uncharacterized protein C14orf45 EMBV3_03367 CCTTTGAACTGTGACCCAGAGAAGGAGCGTGCCTGTGTCTTCTTGTCCTTCACACGAGAT Gene GeneID:100336664|LOC100336664:XM_002686215:495_cdna Constitutive 0 NULL GeneID:100336664 3 GENE LOC100336664 NULL ferric-chelate reductase 1-like EMBV3_07712 AGTCCTCATTTATGCGCAAAGGGATTGCAGGTGACTGGAAGAATTATTTCACAGTGGCCC Gene GeneID:521920|SULT1B1:NM_001075823:38_cdna Constitutive 0 NULL GeneID:521920 6 GENE SULT1B1 MGC127182 sulfotransferase family, cytosolic, 1B, member 1 EMBV3_28646 GCCATTTTAGCGTGAAACAGCAAAGCGTTGCCCTATAGTTAGAAGTAGAGAAAGAGTAGG Gene BVT0102_093574 + 0 NULL GK000012.2:19563530-19596199 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036430 TCONS_00036429 1 XLOC_021149 NonCoding TCONS_00036429 XLOC_021149 NonCoding NonCoding MIR16A 12:19590282-19596884 o TSS26522 3528 2 TCONS_00036429_4 64 0.46797052154195 2 0.46583850931677 5.39908830928814e-05 0.000252066250472118 2.14732882709432e-05 3.29529008018169e-05 4.89799086860674e-05 9.12512786683211e-06 5.53206716478844e-05 2.76615274346604e-05 0.000106170454717865 9.73527860083967e-05 6.18967822315184e-12 4.31906690115585e-13 4.33045638626677e-05 0.000405144009282647 1.13516049087898e-05 0.000591383625004231 0.00081269870935832 0.000295481432491308 1.74338759694546e-12 1.47685668477861e-10 1.76395300144012e-05 0.000712787378748181 0.000450109601929784 0.000128362512987287 3.4773417717769e-05 4.12968617015684e-05 1.5142192485837e-05 4.62575811779601e-05 0.000316021009267733 1.01566085714175e-05 XR_227282.1 LOC101904629 PREDICTED: Bos taurus uncharacterized LOC101904629 (LOC101904629), 0.0 6249 100.00 0.981859410430839 XR_245404.1 DLEU2 PREDICTED: Homo sapiens deleted in lymphocytic leukemia 2 (non-protein coding) (DLEU2), transcript variant X3, misc_RNA. 4e-44 185 71.36 0.110260770975057 0 noncoding AGATGTCGTTTGAGAGGTGTACTGCAAGGAGTTAAATGCTGTTTGTAAATAATGCTTTTACAAAGGTGGATATTACTAGCCCTTATTCATGGAAAAAGTTTTATGCTAAGTGTTGTTTTTCATTGAGTATTAGCAAAAAGGAGAAAAATTAATATCCTAATCTTTTGAGATTAGATTTGGCTGTAGTAAGTAATATTTAGACCAATTATTGGGTTGGCCAGAAAGTTCGTTCGGTTTTTTCCATACGCTGCCTCTAGTAGCACTTAGTTGTCTTTAAACTTCATTTGAAACAACTTCCCTAGATTGTATTGTATACAATTGTCATATCAGAGTGCATTTGAAAAGAAACTTAATCAAAATTGGCAAATTTTTGTGTAGCTATTTTAATATTGAAGATGGAAGAAAACATTTTCAGCATATTGTGCTTATTTCAAAAAAGGTAAAAATGCAACTGAAACACAAAGATTTGTGCAGTGTGTGGAGAAAGTGCTGAGGCTGATTGAATGTGTTAAAAGTTTGTGAAGTGTCATGCTGTAGATTTTCTCACTGGATGATGCTCCATGTTCAGGTAGACCAGTTAAAGTTGATAGTGATCAAATTGGGAACAATCAGTGTTATACCACGCAGGAGATAGCCAACATCCTGAAAATATCCAAATCAAGCGTTGAAAATCATTAGCACCAGCTTGGTTATGCTAATCATTTTGATGTTTGAGTTCCACATAAGTTGAGAGAAAAATCTGCTTGACTGTATTTCGACATGTGCGATTCTCTACTGAAACATAACGAAAACTGTTTTTAAAACAAATTGTGATGAGTGATTAAAAAGTGAATACCATACAATAATGTGGAATGTAAGAGATCGTGGGACAAGTGAAATGAACCATCACCAACCACACCAAAGGCCAGTCTTCATCCAGAGGTGATGTGTATATGGTGGGATTGGATGGGAGTCCTCTATTATGAGCTCCTTCCAGAAAACCAAACAGTTAATTCAAGATACTGTTGCTAGTTAAACCAACCGAAAGCAGCACTCAACGAAAAATGTCCAGAATTAGTCAACAGAAAATGCATAATTTTTCATGAGGATACTGCAAGACTGCATGTTTCTTTGATGACCAGGCAAAAACTGTTGCAGTTTGGCTGGAAGGTTTTGATTTATCTGCTGTGTTCACCAGACATTGCACCTTTTTGTTTTCCATTTAAAGTTTTTACAAAATTCTCTTAATAAAATTTCAGTTCCCTGAAAGGCTATGAAAGACAGCTGGAACAGATCTTTGCTGAAAAAGATAAAAAAAACTGGGGAAGAGGAAATTATGAAGTTGCCTGAAAAATGGCAGAAGGTAGTGGAACAAAATGAGGAATACATTGTTCAGTAAAGTTCTTGGAGAAATGAAAGATGAGTCGTTTTACTTTGAAACCAAAGGAACTTTTTTGGCCAACCCAAACACTTGCATGTCTGGAAGACCATCATCAGTACATTTCCAGCTAAACATTTTTATTTTCTTACCTCTTATCAGGGATTTCTTATTTTTGTTTGAGCTCCTTTAATGGAGAATTAATTTCTCCAGTAGAATTTAAGAATTTATGTTCTTACCTGGTTTATTTATAAAATGTATCCCAGAGATTTCTGATATCTTTTTTTTTTTTTAGGCTATTTGCAGTGAAAAAAATGTTGGCAAAATAAATAAGTTTAAACTTGCTATGTTAAAATTACTGTGCAGTGTGATAAATTAGTTGATGAGTTTTTGTTTGTATTATACTGAAACTAAATTCAACATTTATAACTTCTATATGGGTCTGTTTCTTGATTATTAATACATGGGATTCATATAAAAATACTTGAATAATACATTTATATTAGCATATTGATGAGTATAGGTTCCCCTTAATTCTGTTTAACTTCAATAATCTGATACTATATTCTTATTATAAGAATATATTACTTATTAATAAGAATTATATTATTATATTCTTATGATTACGTTCATGTTTTGCAAAAATGTAAACTGCCTAGAGAACCTTGTTTATGCTATAGGGTTAGATTTTGAGACACTAAATGTTCTTCAATTTAATTAACTTGTTACTAAAGTTATTCTGTATATCATTTTATAATTTAACCGCTTAGCATTAATTAATCTTTAGGAAGTAGTAGAAATTTTAAAATCACTCCAAAGTTTTCTTATTTCCACATCTCATTATTTTATAATCTTTAGAAATGCTTATATTTATGAAAGTAATATTTTCAGAGATAGTAATTCTTACAGCACCACTAAAACTTTTTTTTTCCCTTTGGACTTTAATACATATGCTAGTAAACTATAGGATAATTTTTTGGTTTTGTTTTTGTTTTTTAAGTTTTCATGTGATCACTTAAATGCCATTTTAGCGTGAAACAACAAAGCGTTGCCCTATAGTTAGAAGTAGAGAAAGAGTAGGTACATCGTTTCTTAAGATAATTTGTACATTTTCACATAGTCTGTGCAGATTTTTATATTGTATTTCCATAAATGTCTTCTGTCTTATGTTTAACAAAGAGCATTAAATAGATTTGAAGCATTTATATAGAGAGGACTACAAATTTTATTACAGGCACTGAGGATCAGCACTGAACAAAGCAGATAAATTCCAGCCCTTATAGAGCTTACAATTTGGGGAGTGAGGCATGAGTGATAGAATACATAAAAAACTGATAGGTGCTAATATGTGGTATGTCAGGTGGTGGTAAGTTCTATGAAGAAAAATAAAGCAAGGGGAGTGGGAGGAATGGGTTAAACAGGTTTGGAAGGCAGGAAGGCAGATGTGTTTTTCAATAGTGTGGTCAGAAAATTCCTCACAAAGATAACATTTGAATGAAGACCTAAAAACTAAAGGAGCAAACCTCTAGGTTTCTGGGAGAAGAGCCTTTCAAGCAGATGAAATAACACCTACAGAGACCTTGAGGCCGAAACGTTTTTGGTGTTTACTAAAAAGAGCGGCAAGAAGGTTTGGATGGCTATGATCAACTATACAAGAGAGAATAATAGCTCATAAATTAAAGTTTCTAGGAGCCAAATTTTACGGCTATTTAAGCTCTTAGCTTAACATACAGATTTAATTTTCCTTCCTTCTTTAAAACTACCTTGAGGGTTATGTGAGCCTCAGCCTATTTGACCTTCGTAGATAAGAGTATTTTCTTTAGATCTGACTCAGAACCTCCATCTGAGACCATTTAGAATGTAAAATGTTTAAATGGTTGGTTAATAGGTATACGTGTGATGATCAGGTTTTTATGAACTGTGTTTTTTGTTTTTACTTGCTCAGTTTAGCCTAGTCAAAGCTTAGCTAAATGAGTAAATGACATATTTGTAATTTACTTAAACGAACCAAAATTGATTCCTCCATTCTAGTAATTGCCCCCATTCTTCTCACTTATTCCAATTCTGTTAGCATTTTAGCTAAGGACTTACTTGCCTGAAAGTGTTCATCCCCTATGGTATGTCCCACTAATTTAATCTTCCTAATGCACTGCTTTTGCATATAGGATAAA TCONS_00036431 s 3' 2455 TCONS_00036432 s 5' 456 EMBV3_30036 CTGACTCTGAAGTAGATCCTCACTCTGTGGGCCTTTCTTGTCTCTGCTGGGCCGACATAA Gene BVT0102_137604 + 0 NULL GK000008.2:73690465-73698973 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00225854 TCONS_00225860 TCONS_00225849 TCONS_00225858 TCONS_00225852 TCONS_00225853 TCONS_00225851 TCONS_00225859 1 XLOC_137860 Coding TCONS_00225849 XLOC_137860 Coding Coding DOCK5 8:73409334-73694629 j TSS168994 10707 1 TCONS_00225849_9 1830 0.0645372186420099 52 0.962652561918582 0.00116458766496642 0.000321066138678375 0.000964102372158781 0.00065926877558619 0.000632090979977367 0.000183332736247792 0.00023991931245485 0.000232559112722076 0.00125805901103137 5.03198112526323e-05 1.06940141940845e-13 1.38624856543476e-16 1.38762818542696e-18 0.000283233415531591 0.000125224668488882 2.46767112156837e-19 6.11733885444675e-20 5.08237013718788e-16 0.00054610294000456 0.000409145163351494 0.000130507035121155 2.59349368479846e-90 3.63517447438544e-24 2.98866474678715e-17 0.00141509313880047 0.00153972726098105 0.000724055199636452 8.95683631009752e-13 1.28420080851923e-06 9.94315590304326e-17 XM_581879.6 DOCK5 PREDICTED: Bos taurus dedicator of cytokinesis 5 (DOCK5), 0.0 1.170e+04 100.00 0.605771924908938 NM_024940.6 DOCK5 Homo sapiens dedicator of cytokinesis 5 (DOCK5), mRNA. 0.0 7950 85.42 0.643971233772298 TCONS_00225849_9 sp|Q9H7D0|DOCK5_HUMAN DOCK5_HUMAN Dedicator of cytokinesis protein 5; 0.0 3487 94.54 0.999453551912568 2 coding 0 0 0 0 0.00710254610575417 0.984258224694676 -0.0484331217446363 0.344553655927127 GTGCAGTCCCTGCGTTTGACTCTTTGTCTGAACAACGCACCTAGTGAACAAGAAAGATTCGGATGTGCCTCGTCCCCTTCCCCGCAGGAACGCTTTTTGGGCTGCTGAAAAAGGGAGGTCTTTGGGGCGGGCTTTCCCATGGACCATGAAGGTCTGAATTTCTACAGCTGGGTCTGAGTCTCTTCAGCTGGGGAGGAGCCCAGGTGTTTCTCGGGGACATAAGATTTCCAAGTCAGAACTCGCTACATAATTCTCGCTAAGAGGCTCCCCTAAGAAACTACTTGATACTTCTGAGGAGCCCGGCTCCTTCGCATTAGTTCTCTATTTACCAGAAGACAAATGTTCCTGCTTTGAAGGCTATGAACCGTGGCCAAAGGAGATCACATTTGCCTCGGAGTTCGGCTTCCGGCTCTCGTGGTGTCAGCGAAAGCTCTAGGGGGTGAACGCGGTAGTCAACTGCTCATTCATTCCACAAATATTTATCGAGCGCCGGTTGAGTGCCTGGCACTGCGAGAGCCCGGACGGCTACAAACAACTTATCTTAGATACTATGCACTCATCCTAGTTCCCCCAGATGCTCCGCAGCGCGCGCGATCTATAACTACAACGCCTCTCAAGATGTGGAGCTGTCCTTGCAGGTTGGAGACACAGTTCACATCCTGGAAATGTATGAGGGTTGGTACAGAGGATACACCCTCCAAAATAAATCCAAAAAGGGTATTTTCCCTGAAACGTACATCCATTTGAAAGAGGCCACTGTGGAAGACCGCGGGCAGAACGAGACCGTGATTCCTGGGGAGCTCCCCCTGGTGCAAGAGCTTACCTCCACACTGCGGGAATGGGCTGTCATCTGGCGCAAGCTGTACGTGAACAACAAGGTCACGCTCTTCCGCCAGCTGCAGCAGATGACATACAGCCTGATAGAGTGGCGGTCCCAGATCCTGTCTGGCACCCTCCCCAAAGATGAACTGGCAGAGCTCAAGAAGAAGGTCACAGCCAAGATTGATCATGGGAACAGAATGCTGGGGTTGGATCTGGTTGTGCGGGATGACAATGGGAACATTTTGGACCCAGATGAAACCAGCACCGTTGCCCTCTTCAAGGCCCATGAAATGGCCTCAAAGAGGATTGAGGAAAAGATCCAAGAGGAGAAGTCCATTCTGCAGAACCTGGATCTGCGGGGCCAGTCGATCTTCAGTACCGTCCACACCTACGGCCTCTTCGTGAACTTCAAGAACTTTGTCTGCAACATCGGGGAAGATGCAGAGTTGTTCATGGCCCTCTATGACCCGGACCAGTCCAAGTTCATCAGTGAAAACTACCTAATTCGTTGGGGCAGTAATGGAATGCCCAAGGAAATCGAGAAGCTCAATAACCTTCAAGCGGTCTTTACTGACCTCAGCAGCACAGACCTCATCCGGCCCCGCATCAGCCTCGTGTGCCAGATTGTCCGAGTTGGCCACATGGAGCTGAAGGAGGGCAAGAAGCACACCTGTGGACTCCGGAGACCCTTTGGAGTAGCAGTGATGGATATTACTGATATTGTTCATGGCAAGGTGGATGATGAAGAAAAGCAGCATTTTATTCCCTTTCAACAAATTGCCATGGAAACATATATCCGACAGAGGCAGCTAATCATGTCGCCCCTGATAACATCCCACGTGATCGGGGAGAATGAACCACTCACGTCAGTCTTGAATAAAGTGATAGCAACCAAAGAAGTGAATCACAAAGGACAAGGACTTTGGGTGTCCTTGAAGCTATTGCCAGGAGACCTCACGCAAGTTCAGAAAAATTTTTCACACTTGGTTGATCGATCCACAGCTATCGCACGGAAGATGGGCTTTCCTGAGATAATCCTTCCAGGAGATGTTCGGAATGATATTTATGTCACCCTGATCCATGGGGAGTTTGACAAGGGGAAAAAGAAGACACCAAAGAACGTGGAGGTGACCATGTCTGTACATGACGAGGAGGGCAGGCTCCTGGAGAAAGCGATTCATCCTGGTGCTGGATATGAAGGCATTTCTGAGTACAAATCAGTGGTGTATTATCAAGTCAAGCAGCCCTGTTGGTATGAGACCGTCAAGGTGTCCATTGCTATAGAAGAAGTTACTCGCTGCCATATAAGGTTTACCTTCCGACACCGGTCGTCTCAGGAATCCAGAGATAAATCGGAGCGAGCCTTTGGCGTGTCCTTTGTGAAGCTGATGAACATAAATGGCACCACTCTGCAGGACGGGAGGCACGATCTGGTGGTGTATAAGGGTGACAACAAGAAGATGGAAGATGCTAAATTCTACCTGACCTTGCCTGGAACCAAGGTGGAGATGGAAGAAAAGGAGCTCCAAGCATCTAAAAACTCAGCCAACTTTGCACCAGCCAAAGACAGCACAAAGGACAGCTTTCAGATTGCCACCCTCATATGTTCCACGAAGCTCACCCAGAATGTTGACCTGTTAGGCTTGTTAAATTGGCGCTCAAGCCCTCAGAATATTAAACACAACTTGAAGAAGTTAATGGAGGTGGATGGAGGAGAGATTGTGAAGTTTTTGCAAGATACACTAGATGCACTTTTTAACATCATGATGGAAATGTCAGGTGATGAAACATATGACTTCCTCGTGTTTGATGCACTGGTGTTTATTATTTCACTGATAGGAGACATCAAGTTCCAGCATTTCAACCCTGTTCTCGAGACCTACATTTATAAGCACTTCAGCGCCACTCTGGCCTACGTGAAACTCTCCAAGGTACTGAACTTTTACGTGGCAAATGCAGATGATTCCAGCAAGACGGAATTGCTTTTTGCTGCTTTGAAAGCCTTAAAGTACTTGTTTAGGTTCATCATCCAATCTAGAGTACTCTACTTGAGATTTTATGGCCAAAGTGAAGATGGAGATGAATTTAATAATTCCATCCGCCAGTTATTTCTTGCTTTCAATTCATTGATGGACAGGCCTATGGAAGAAGCTGTCAAGATCAAGGGGGCAGCCTTGAAGTACCTTCCTAGCATCATTAATGATGTCAAACTTGTGTTCGATCCTATTGAACTCAGTGTGCTCTTCTGCAAATTCATCCAGAGCATCCCTGACAACCACTTAGTTCGCCAGAAACTGAACTGCATGACCAAGATAGTAGAGAGCAATCTTTTCCAGCAGTCGGAGTGCAGGGATGTGCTGCTTGCTCTGCTGATAGACCAGCTCAGCGGCCAGTTAGACGACAACTCCAGCAAGCCTGACCACGAGGCCAGCTCACAGCTTCTCAGCTACCTCCTGGAGGTTCTGGACAGGAAGGATGTGGGCCCCACGGCGAAGCACATACAGCTGGTAATGGAACGGCTGCTGAGAAGGATCAACCGGACCGTGATTGGGATGAGCCGACAGTCTCCCCATATTGGGAGTTTTGTTGCTTGCATGATCGCCATCCTGCAGCAGATGGATGACAGCCACTACAGCCACTACATCAGCACTTTCAAAACCAGACAAGACATCGTTGACTTCCTCATGGAAACTTTTATCATGTTTAAGGATCTAATTGGAAAGAACATCTATGCTAAAGACTGGATGGTCATGAATATGACACAGAACAGGGTCTTCCTCCGTGCCATAAATCAGTTTGCTGAGGTTCTCACCAGATTCTTCATGGATCAGGCAAGCTTTGAACTTCAGCTCTGGAACAATTACTTCCATTTGGCAGTAGCATTTCTCACGCATGAGTCCCTTCAGCTTGAAACCTTCTCACAAGCCAAGCGCAACAAAATTGTAAAAAAATACGGGGACATGAGAAAGGAAATCGGCTTTAGGATCCGGGACATGTGGTATAACCTGGGTCCCCATAAAATCAAATTCATCCCATCCATGGTGGGTCCCATTCTGGAAGTCACATTAACCCCCGAAGTAGAGCTTCGGAAAGCCACCATCCCCATTTTCTTTGATATGATGCAGTGTGAGTTCAATTTCAGTGGAAACGGCAATTTCCATATGTTTGAGAATGAGTTGATCACAAAGCTGGACCAGGAAGTAGAAGGGGGCAGAGGAGACGAACAATACAAGGTCCTTCTGGAAAAACTGCTCCTAGAGCATTGCCGGAAACATAAATACCTCTCCAGTTCCGGAGAAGTATTCGCACTCCTGGTCAGCAGCCTCTTAGAGAATCTCCTGGACTACAGAACCATCATCATGCATGACGAGAGCAAGGAAAACCGCATGAGCTGTACTGTTAACGTGCTGAATTTTTACAAAGAAAAGAAGAGAGAGGACATCTACATAAGGTACTTGTACAAGCTGCGAGACTTGCACCGGGACTGTGAGAACTACACTGAAGCTGCCTACACACTCCTCTTACATGCCGAGCTCCTGCAGTGGTCTGACAAGCCCTGTGTGCCCCATTTGCTTCAGAGGGACAGTTACTACGTGTACACCCAGCAAGAGCTTAAAGAGAAGCTATATCAAGAAATCATATCATATTTTGACAAAGGCAAGATGTGGGAGAAGGCAATCAAGCTGAGCAAAGAGTTGGCGGAGACGTACGAGAGCAAAGTTTTTGACTACGAGGGCCTGGGCGATCTCCTGAAAAAAAGAGCCTCGTTTTATGAGAACATCATTAAGGCCATGAGGCCTCAGCCCGAGTACTTTGCTGTTGGCTACTACGGACAGGGCTTCCCTTCTTTCCTGCGGAACAAGATCTTCATCTACCGGGGGAAGGAGTACGAGAGGCGAGAAGACTTCAGCCTGCGGCTGCTGACCCAGTTTCCCAATGCGGAGAAGATGAGCAGCACCACCCCCCCAGGAGATGATATCAAGTCTTCCCCCAAGCAGTACATGCAGTGCTTCACTGTCAAGCCAGTGATGAACCTTCCACCCAACTACAAGGATAAACCAGTTCCGGAGCAGATCTTAAACTACTACAGAGCCAACGAAGTACAGCAGTTCAGGTATTCTCGGCCATTCCGGAAAGGAGAAAAGGATCCTGACAATGAGTTTGCTACCATGTGGATTGAAAGGACCACATATACAACTGCCTATACCTTCCCTGGGATCCTCAAGTGGTTTGAAGTCAAACAGATCTCAATAGAGGAAATCAGTCCTCTGGAGAATGCCATCGAAACCATGGAGCTCACCAATGAGAAGATCAGCAACTGTGTCCAGCAGCATGCCTGGGACCGGTCCCTCTCTGTGCATCCCCTCTCCATGCTGCTCAATGGCATCGTGGACCCAGCTGTCATGGGGGGCTTCTCTAACTATGAGAAGGCATTTTTTACAGATAAGTACTTGCAGGAGCATCCTGAAGATCTGGAGAAGATTGAGCTGCTAAAGCGACTAATAGCATTGCAGATGCCTCTGCTGACAGAGGGGATCCGCATCCATGGGGAGAAGCTGACGGAGCAACTGAAGCCACTGCATGACCGGTTGTCTTCCTGCTTCCGGGAACTCAAGGAGAAAGTGGAAAAGCGCTACGGGGTCATAACACTGCCACCCAACTTGACCGACCGGAAGCAAAGCCGCACAGGATCTGTGATGATCCCCTACATCATGTCATCCACACTGCGGAGATTGTCCATCACCTCAGTGGCTTCCTCTGTGATCTCCACCTCTTCTAACTCATCTGATAACGCTCCTTCCAGACCAGGATCTGATGGGTCCTTCCTGGAGCCACTGTTGGAGCGCAGGGCCTCGTCAGGGGCCAGAGTGGAAGATCTGTCCCTCAAAGAGGAGAGTGAGACTCGGATGAGCAAGTTCAAGATTAAAGACTGGAGTCTGAGCAAGTCCCAGGTCATCGCAGAGAAAGTGCCAGAACCTGATCTGATGAGCCCAACCAAGAAATCACAGAGACCCAAGAGTCTCCAGCTGTCGGACAATCGGCTGACACCATTTCCTGGCGCTTCAACTCCACAGTCAACAGCCCTGAGCCCACCCCAACTCACTCCTAAAGCGAACAGGGCCCTGAGCTCCCCATCGTTGCAGACAGATGGACCGACAACGGCTAATGTCCCACCGCCCCCTCCCCCCAAAAGCAAGCCCTATGAGAGCAGCCAGAGGAATCCCACAGAGATTGCACCCCCACTGCCTGTCCGAAGAGAGGCCATAGTCCCGCCCCCTCCACCTCCAAAAGTACGGAAATCCGGCATCCTTTCTTTTGAGCCTGGATCCCAGTAAGGATCTTATCCTCTCTCTGGAGCTCTGAGCACCTGGACCACGGATGCCTGGGAATTGGCCTTGGAGAAGCAGGGTCCTCACTGCCCGGGGTCCCTGCTGGCCTCCTTTCCTGATCTGGAACTGAGGTTCACCAGCTCAACACTGGTTTCGTCTTTTCCAAAGCGTCTTTTTGATCCATGCCTGAGGCCCTGCCATTTCTCCTCCAACCCATGTGGAATTCCATAGTTGGCCACTTCCTGTGTTTCTCCCTCACCGTTACTACATTTCAGCCTCCAGCACAGAACCACCAGGGTCTCCAGGAGCCTGGATAAGTTCTTCGTTGGTGCTGGTGGTGGGAAAAGCCTCACAAACCTACTCCTTACAGGAATTTCCTGCTTTGCTTCTGAAAAGCTGTACTTAAGACATTGTTTTCTCATGTGGACACACCCTGTGATATAACCCATTGGAAGAGACCAACATCACGTACTTTGGTAGCCAAAACTATCTATCTTTCTGAGGTTTCCCTGTGCTTTTTTTTTTTTGCGGGAAAGAACATCTTTTTCATGGAGATTGGCTGCTTTCAAGTAGGAATGGCTATCATCGTTGAAAGAATGTGGACTCAACCGTGAGCCCTGAGCGCCTCTGTTTCCCCCACCCCCACCCACCTAAACTGTCCCCCTCCACCTTCCCAGGAGTTCCCCACACTCCCAGCTAATGGTCCTCTCTGCACGGCAGTCACCTCTTCCTACCACAGACTCCCAAGACTCTGACTTTGGCACAGTTTCTTCTATTACCTCGGAGCTCAGATCACTGGATATAAGGGACTTAGAAGCCTGGATTGAACTGCTTTGCTTCGAGATCTCATTGGAATGGTTTGGTGGCCCCCCATCTGCAACCTGATTTTATCCTGGAGAATACAGTGCAATATCTCTTGTTGATTATTTATTCCTTCTTGATTGTTTAATTGATTTGATGATGTGTTCACGGTACCCTCATCAGGCCTCTTTTCAGAAGAAAAGGTAGGGTGATTCAGAGGATCAAATATTATCAGCAGATACGTAAACAGCCACACAGAACTAAAGACCTTTTGAGCTCGACGGCCCTTAAAAGTCCTCCAGTACCCACCCCCCATTTTGTAGATAAGGAAATTGAGGCTAAACACAGAAAATCCTACTACAGACTCTCCCTAATAACCCAGCTTTCTCATTGAGTTTATACCTAGATAACATCTCTAGAAGACAACCCTGATGAATTCTTCAGTCCCTACCCCTAGCTGGAACAATAGTGGAAATGTCCCAGATAATTTCTGTACTACTTAGCTTTTTATGGCAAAATAGAAAACATTTAGAGTATGGATGTCCTGGGTCAGCCTGTGGGTATGCTCACCAGGGACTCTTCGGCAGCCTGGCCAGGTCACCTTGCCTTTGAGGTCCAGGATAGGTGGGGGGTTTCCCAGATGGCTCAGTGGTAAAAGAATCTGCCTGCCAGTGTAGGAGATACAGGAGATTTGGGTTCAATCCCTGGGTCGGGAAGATTCTGTGGAGAAGGACAGGGCAACCCACTTCACTAACCTTGCCTGGAGAATCCCATGGACAGAGGATCCTGGTGGCTATAGCCCTTAGGAGTTGGACACAACTGAGTGACTGAGCACACACAGAGGAGAGAGAGAGAGAGATTTAACTTCCAAAAATTGGGGTTTTCTTGCCTGCCTCTTTGGGTGCCTGTTTCACCACCATTCCTAGGAGAGACGTGTAAGTTCATCACAGCATCAGGGAAGTAAAGCCTCTGAGACGTGTCCAGGGTGACTGAAGAAATGAGAATGCATATTTGCTAGTGCTGCGTTCTTTCTTTGGCTCCACTCAGAGCACCCGCATGTGATGTAGCAGAAAGATGTGAAGCCAGGGCTCTGGAAGTAACCCGTTCAGGGTTGAATCAACCCAGCTATGGCCTCTCTCAGCTTTGCACACCCCCTTGAATTATTTTAAATTCTCTTGAGCTTTTTTCGCCTTTCAAAATGGAGGTCATCCCTCCCACGCAGACTGCCGGGGGTTCAAGTGAGGCTGACTCTGAAGTAGATCCTCACTCTGTGGGCCTTTCTTGTCTCTGCTGGGCCGACATAATATTTGAAGCTCTCCACAAGCATGATCGATCTTCATTTTTATTTTTTTAGAAGATAATTTGGAGGGTGAGTGCAGATTAGTTCTGCACACAACAGTCCCTCTCTAAAAGGTAGCATCTTATATGTTACTAGGGACAAATTGTTAACAAGACCTGAAGACAGGGGACTTCCTTGGTGGTCCAGTGGTTAAAACTCCATCCTTCCAATGCAGGGGGGGTGGGTTCGATCCCTGGTTGGGGAACTAAGGTTCCACATGCCATGTAGTTTGGCCAAAAAAAATTTTTTTGAAGATCTGGACTTGATTTTAAGTGGCACGAGAAGAGGAGGAAGAGAATCTGCAGGGCTGACCTGGAACCCAGAGCAGCTTCTGAGAAGTTGCAAGGCAGACTGGCTGGAGGGGATTCATGAGCTTTACATGCTCCGTTAAAATAGAAGGATGTAAACTACGTCACAAAAGAAAGAAACCTGAAGCATGTTCCGTTCAAGTCACAAGGGTGCATTGTAAGTTCTGGCCTTTGGTCAGAGATTGGGGCTTCCTAAGGGGCGCAGTGGTACAGAATCTGCCTGCTGACGCAGGAGACAAGGATTTGGTCTGAGTCAGGAAGATAGATCCCCGGGAGGAGGAGATGGCAACCCGCTCTCGTATTCTTGCCTGAAAAATCCTATGGACAGAGAAGCCTGGCGGCTACAGTCCCTGGGATCACAGAGTTAGACGTGACTGAGCACACAGGGACATCCAGTAGACCAGTGCCCAAATACATTTCCTTTTTTGACATAACGTTTTCCCATAAGATTCCCTTCCCACATTCACGCAAATCCTAGATCTCTCCTGCCTGAATACACAGGATTCCAGGTCATGTGGTGAATAAGAGGTCCCAGAGGACACTGGACTACTCACTCTTGGTCAGAAAGAGTCCCATTTGACAAAAGATCCTAAGTAATGTCTGTCCTGAAGTCAAAGAGGAAAGCTGCAAAGCTTTAGGATTACCATAAAGGTAGGTGAAATACTGAAGAAGCAACTGGTCCTTATTTTCCTTGATAAGAACTCAAGTATTGAAAGCCCTTGGAAGTAGCCCCCAAATTGTCACAACCTTTGTGGATGTTGGTTTATGGAATTTTTGTTTGAAATCCTTTCTTCCCTGTCTCTCTCTCTCCATCTGGGCGACTTGTCTTGAATTTTTTTTTTTTTTCCAAGAATCGTTTCATGTAGCATAGATTAAACTCTTACTGAATGTCAGACACTGTCCTAACACCCAGGTTGTGACAATCCAATGTGTTCAAAGGGAACAGCCCCAGATACGAGGATTGTGGTGTGTCATGGGAGTGGCAAGACAGTGGCATTGGCCTTAAGGGAAGCCATAAATAAGGTGCTGGGCCAGGGGTTGCTTTCTCCTTCTCCACCTTCATGCCTTGATTCCAAAATTACAGTTGTTTTCCCCTGTCAGACCCATTAAAAAAACAACTGCCACCCTCAGATCGCTAAGACAGAGCCAGAGATCAAGCAGGATATGAGATTATAAGCTGCCTTTTCTAACTCTAAGCTTGGAGACTCCTTTCCCTCTCCTTGCCCTTGGGTCATGGGGTGATTTCTTGTTTTGAAATTAAGGTGTAACATTCAGACAGTTAAGGTCACAAATCTTAGGTGTACAGATGAATCCAATTTGATAATAGTGTACACTCAAGTTACCACCTCAGAGAGCCACAGGCTTCTCCCAGCCGTATGGAAGTCTCCCTGGCATCTGCTGTCATTTATCAAAGGCATTTAGAGGGCCCTTCCATTTGTACTGTCCTTCCTGTCATTTTGCAGGTTTAATGAAAAGGAAAGGAACAAACCCTACTGTCGACACCCAAGAAGACTTTATAAAGGGTATACGTTTGGCAGGTCAATTTGGTCAGTCCCTGGACCTTAACCTGAATTTCTTCATATAAAGTACATGTATACATATATATGTGTGTGTGTATTTGAGGTTACATGATTGTTTTAGAATCCTTTCAGGCCTAGCTTTCTTTTAAGTGAATGAAAAAGAGGGGTGGAGAGTCAGAAGAAATCTTAAGTTTCTCTTCCAAAGCTTTTAAATCCTTACCTCATGACTAAGTAGTATTGTAAAGTTAAATTGGAAAAGGTAAGTTGCTCTTTGGGTGGGTTGAAAGTGGAATTATCAGTTTTACTCTACAAAAGGAGAATGTTTTCCTTTTAAGTTCATGATTTCAGGCTGATGCTTACAGTCCAGCCAAGGCTTATCTGCTTGCTATGCATCCCAAACTTATCCATTAGCCACATTTTGTGAGTTGTTCATCCAAACTTTGTCAAAAGCCCAGTTGCCTTGATTGTGTGAACTAGTTGGGTTTCAAACACAAAGTGGGTAAGAATATATGTACTGAAGTAGAAAACATTTTGTTCAGATTTGCTGTAATTTATTTTTTAAATTAAAAATGGAAATGTATTTTAAA EMBV3_39184 CACTTCATAGTGGATGAGCTGAACGCCAAGAAACTTCTAGAAGCTCATGAAGAACAGAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07462 TCTGGACGCAGTATTTTGTTTGGGGAGCTCTCATGGTTGGGGAGGAGGGTATGAGCCTTA Gene GeneID:533058|PET112L:NM_001046343:19_cdna Constitutive 0 NULL GeneID:533058 17 GENE PET112L MGC137224 PET112-like (yeast) EMBV3_08011 GCACACAGATGTGTACCAACAGTGGCTGCAAGCTTCATTTCAACCTGAATATGCTGGTCA Gene BVV0101_064052 + 1 EMBV3_25266 GK000023.2:26354824-26518729 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25642 CTGGGATATACTTTGTAAAGCTTCCATCCCCTGTAGTTATGACTGCATGTGCCAGGCCTC Gene GeneID:281832|HSP90AA1:NM_001012670:133_cdna Constitutive 0 NULL GeneID:281832 21 GENE HSP90AA1 HSPCA heat shock 90kD protein 1, alpha EMBV3_02531 CCTAGCGGAGCCTAGCAATCTCTTTGTGGTTTCTTCTGATTTCTGCCATTGGGGTCAAAG Gene GeneID:615803|MEMO1:NM_001076395:38_cdna Constitutive 1 NULL GeneID:615803 11 GENE MEMO1 NULL mediator of cell motility 1 EMBV3_08378 CTGAGGCCCAGCTCAGAGCCTGTCTGTCCTTTTATTGGGGGCCTGCTTTTGGAAATGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16669 ACCTCCGAAGTGTGTGTATCTATGGAGCAGCGGAACTAAGGTGGCTTATGAAATATGGAC Gene GeneID:782825|GCNT4:XM_002690413:92_cdna Constitutive 0 NULL GeneID:782825 10 GENE GCNT4 NULL glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase) EMBV3_39016 TGAGCCTGCCAGTGAAACCTGGACAAGGAGACTCTTAGATCCTCAGACAAACACTGAAAT Variant GeneID:519260|RABGAP1:XM_002691575:81_cdna 521^725 1 EMBV3_27731 GeneID:519260 11 GENE RABGAP1 NULL RAB GTPase activating protein 1 EMBV3_14359 GCCTAAACGATGGTGCTTGGTAAGTCTTGGTTCTAAAGGTACCAAATGAGGCCAAAGTTC Gene GeneID:520842|KLF4:NM_001105385:18_cdna Constitutive 0 NULL GeneID:520842 8 GENE KLF4 MGC139189 Kruppel-like factor 4 (gut) EMBV3_34954 AGCCAAATCACCGAGAAAGGCTCCTGGGAAGGAGAGGCCTGAGGAGCTGGTTAAACACAA Gene GeneID:786784|ZNF688:NM_001081625:428_cdna Constitutive 0 NULL GeneID:786784 25 GENE ZNF688 MGC148861 zinc finger protein 688 EMBV3_14198 AAGTTTCACTGCAGAACTGCAGAGTATGATTTACAGCAAGCTGCTGAAGTTTCTCAGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24668 GTGTATTCCTTCCTCTACAAGATAGTGGAGGTACATCACGCAGCAGGGCAACAAGCTGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38894 GTCGGTGACTGACCGGGCAGCACAGACCCTGCTGCATCGCCTGCAAGCTCTGTGAGGCCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38493 CACAGATTAAAAAACTGCAAATACTTTGGTTAATAAAGGCAGCTTACTTTTTGGAAATTA Gene GeneID:516557|SAV1:XM_002690834:151_cdna Constitutive 0 NULL GeneID:516557 10 GENE SAV1 MGC142860 salvador homolog 1 (Drosophila) EMBV3_20411 GCATCAACTACAGAAAAGGCCAGACAAGTGTGTACAGAAACTAGTTCCCAGCAGCCCTCC Gene BVT0102_333610 + 0 NULL GK000010.2:19959914-19980211 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019750 1 XLOC_010429 NonCoding TCONS_00019750 XLOC_010429 NonCoding NonCoding - 10:19962852-19964143 - TSS13640 1291 1 TCONS_00019750_1 52 1 0 0.000537482444070627 0.000147885577843774 0.000207874132148899 0.000109349796651298 0.000225633310633197 0 0.00028006710976379 0 0.000158902869029929 0 7.09273645387754e-06 2.76970154593453e-06 0 0 0 0.000613747069047074 0.00105452070968101 0.00235166422897624 0.00084984676547292 0.000128120103105632 0.000199874083778539 8.04721333437425e-05 0.000525855506743855 0.00027270122186802 0.000311272072518757 0.00153352274290575 0.000222384199774729 8.18411570410837e-05 0.000203058721220658 0.000395849035424325 NM_002499.3 NEO1 Homo sapiens neogenin 1 (NEO1), transcript variant 1, mRNA. 0.0 843 75.58 0.987606506584043 0 noncoding TGAATTAAAAAAAGTGTATTGGATTTCCAATACTAAATAAAAACATGAAACTGTTTTTCAAAAAGCCATAGAGTTTACAGCATCAACTACAGAAAAGGCCAAACAAGTGTGTACAGAAACTAGTTCCCAGCAGCCCTCCAGGCCCCCCTCCAGCAGGCAACAAGGCAACAGACACGTTCGTTCCAGATCTTCCTGAAGGAAGCTGCTGGCCAGCAGCTCAACTAGGACATGACAAGACACACAATGGTTTAATTTCAAAAATCACAGGAAAATGTAAGAAAATGTATTAAATTGTGAAAAGGTGCAATACAGAATAGCTTTCCTATTTCTTACTTTTAAAAAAGTCCCCCAACTTTGAACAGTTATTTAAAAATAGGTCCCTCCCCCCGCCCCAGTTCTGTGGCAGTATGCAGGTACCAAGGCCCTGAGGTAACAGAAGTATCAGGGTTCATGGGAGGGAATGCCCCGAATACCGAGCATGTGTCTTTGGGCAAAAGGTAAGACAGTTAGTTTCTGGGGAATCTCGCGCTCCTGGTGTCCAGAGTGCTCCTCTCAGGATCAGCTGAAGTGCACTGCATTTCCAGAATCCTGCCTGGCACTATCCTCCATGACCAGCTAGCAGGGCAGCAGGAGGTCCCGCACTGCTCTTTTCACTGCCCCCAATTAAGAGACAGAGAGTTTATCTCCTAGAAGAGCCAGTGTGCCATGAGACCTAAACGGGGGAAATGACCAGCGCAGAAAGGCAAGCGGGGCTCCTGCCTGCTGCAGGCTGAGCGCCCCCTGCTGGTCCCAGCCAGTAAGATGCTAGTTCTTGGCTACATCTCCATCTGCCTTACACAGCTCCCTCAGCCTTACACACTCTCTTCTAGGATTTGCTGGGGAGTCAGGGAAGATGCCTGAGGGTCAGTCCTGTATTTTTTCTTAATATATTCTTAATATATATTAAAAAAACTCAGCTTCTTTCCTTTTAAAGAAGCACACGAGAACCACCTGTAAAAGCCAAAGGTTTCTTGTATGGCTGGCCTCCCAGAGCCCCTCAGAGACCTCCTGCTGCCTTCTTGGAATCAGGGGCTTAGCTGAGCTGCTGGGAGGGTGCGGTGGGGAGCGCTCTCCTGGTCCCCTGCTACTTATGGGACAGTGTTCAGAAAGAACTGCGAGCCTCACTGGTGCTGCTTCATTCTTGCTAACGCCGTCTCCACAGGGGCTCTGAGACGTAGAGACGAGGGCTGGACTGACCGAGGACAGGAACTAGGGAGAAGCAAGGAGTCTTGTGTGGGAACAAAATCCCCAC TCONS_00012925 TCONS_00012926 TCONS_00012932 TCONS_00012933 TCONS_00012934 TCONS_00012935 TCONS_00012936 TCONS_00012937 TCONS_00012938 TCONS_00012939 TCONS_00012940 TCONS_00012941 TCONS_00012942 . 3' 2819 TCONS_00012925 TCONS_00012926 TCONS_00012932 TCONS_00012933 TCONS_00012934 TCONS_00012935 TCONS_00012936 TCONS_00012937 TCONS_00012938 TCONS_00012939 TCONS_00012940 TCONS_00012941 TCONS_00012942 . 3' 4109 EMBV3_13178 CGCGAAGTGAGTGACTGCAGCTGTGTCTGTTGTCCTGAGGTGGAATGTGGGTTTCTTGTT Gene BVT0102_197115 + 1 EMBV3_40229 GK000020.2:1-14601 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00050921 1 XLOC_031041 Coding TCONS_00050921 XLOC_031041 Coding Coding LOC100847880 14:14477-18623 = TSS38097 1135 1 TCONS_00050921_1 209 4 0.727141133896261 7.19244996536506e-05 0 0 0 0 0 0 5.21121103757732e-06 7.64682610380625e-05 0 0 0 0 2.7629945187751e-06 6.92967165200959e-06 9.30803145258216e-05 0 0.000154745774012674 0 0 0 1.96141027105392e-05 2.42486660948946e-05 0.00022155899354875 0.000109878952444132 3.1037395939832e-06 0.000529990039506583 8.46270772208622e-06 8.55437696920454e-06 5.29713697983464e-06 XM_001256523.4 LOC789904 PREDICTED: Bos taurus ribosomal protein L7a-like (LOC789904), 0.0 1287 96.78 0.682819383259912 NM_003626.3 liprin Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 5e-31 140 74.88 0.176211453744493 TCONS_00050921_1 sp|Q13136|LIPA1_HUMAN LIPA1_HUMAN Liprin-alpha-1; 7e-23 99.0 69.23 0.358851674641148 0 coding AGACCCTCTAAGCCACGAGGAAGACCTGGCTAAGGTGATCGACCTCCAGGAAGTCATAGACAAGCAGGAGCAGAGCCAGATGGAGGAGCGCCTGGCAGCCCTCTTTGCCCATGTGTCAGAGCTGAAGGAGGACCTGGACACGGCCAGGAAGGACCTCCTCAAGTCCGAGGACGTGAACAGGAAACTGCAGCAGGATGTCCACGAAGTGAGTGACGGCAGCTGTGTCTGTTGTCCTGAGGTGGACTGTGGGTCCCTTGTTCTCCCAGTGATCTCAGCCTTGGCATGGCTGTGTGAGCAAGAGCAGAGCTCTAGCGAGACCGCAACTGGCTGCCTCCCCGCCTCTGCATTGAGATCTCTGGGAGACCCTTTAAGCCACGAGGAAGACCTGGCTAAGGTGATCGACCTCCAGGAAGTCATAGACAAGCAGGAGCAGAGCCAGATGGAGGAGCGCCTGGCAGCCCTCTTTGCCCATGTGTCAGAGCTGAAGGAGGACCTGGACACGGCCAGGAAGGACCTCCTCAAGTCCGAGGACGTGAACAGGAAACTGCAGCAGGATGTCCACGAAGAGAGTCTGGTGACGTCTGTGGAGCCCGTTCTCTTGGAGAGATGGAAGCATGCTGTGTGGACTCTGCTGAGGCAGCTTTCCTGGCCATCTTCTCGAGTTTCTGAGGTTCCGCTCCTTGAAGGGATGTGTGACAGTGATACATGATACAGTCAGACAAGTCGAGTGATGTTTGCTCACCCTCAGATCTTCAGGCCCGAGCTGTGTGACCATGTGGAATCATGATGTTTCTGGCGGTCGTGTCTGCGGGTGTCATGATTTATGAGAAACTACCTAACGGTCACTGTGAAAACAGAAGAGTGCTGGGGGTTCAGGCCTCCTCCTGTGAGCCTCACCTCTCCTCTGTGCACAGACAGACAGCGCCCACCCTGCCCACCCCTCCCCCGTGAGACCGTCTCAGAGAGAACCCCTCCAACATGTGGTACAGCAAGTGTCCTTGTTTAGTAGCTTGGTGTGAGTAATTCCGCGTGAGAACTCAAAACAGAAATATTTGCACAGGTTTGTATAAGCTATTCACACTACTCTTTGGCAACAGGAGATTAGGTGGCAGAGTTTAATACATACAGAATTCTG EMBV3_00577 ATTACAGGTTACTAATAACTTTGAAGGCAGTGAAGCTGTTCCTTTTAAGCTGGGGGTGGG Gene BVV0102_155157 + 1 EMBV3_10348 GK000013.2:58023710-58038248 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08113 GGGAAAACTTCACACCGGTTGGGAAACAAGCAAAGGACTTTGCAGATTCAAAAAACAAAC Gene GeneID:511771|CXCL14:NM_001034410:19_cdna Constitutive 1 NULL GeneID:511771 7 GENE CXCL14 MGC127163 chemokine (C-X-C motif) ligand 14 EMBV3_36166 CACATAGAACAGGTTTAATTTCACAGCATCTAAACTGCCCCCAGAGTGACCGAGGCACCG Gene BVV0102_267511 + 0 NULL GK000018.2:11684010-11686652 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082273 TCONS_00082280 TCONS_00085420 TCONS_00082272 TCONS_00085423 TCONS_00082270 TCONS_00082269 TCONS_00082274 TCONS_00085422 TCONS_00085421 TCONS_00082283 TCONS_00082276 TCONS_00082275 TCONS_00082277 TCONS_00082271 TCONS_00082278 TCONS_00082282 2 XLOC_050955 XLOC_051868 Coding TCONS_00085421 XLOC_051868 Coding Coding GINS2 18:11684283-11724636 = TSS63800 3766 1 TCONS_00085421_2 185 5 0.90679520222046 0.000263897257814794 0.000248681213271495 0.000416408144089337 4.33839214072641e-11 6.90520746583038e-05 4.6210004645773e-05 0.000129182354889692 0.000119021365366556 0.000283103639849549 5.82719727526311e-06 2.07233503523407e-181 1.41763739308478e-291 4.85007289770371e-06 0.000146571688846873 0.000221988736375751 0.00088370834095286 7.96740051947165e-05 2.29059926529738e-15 0.000110020184938425 0.000280650576116558 0.000161479927769605 6.69361853114554e-16 0.000564215358381549 0.000240847452286366 6.84490860526402e-05 0.000108369814355922 7.06353697451443e-05 0.000119316287419672 2.50336588017736e-08 0.000120152343925635 XM_005218753.1 KIAA0182 PREDICTED: Bos taurus KIAA0182 ortholog (KIAA0182), transcript 0.0 3171 100.00 0.466542750929368 NM_016095.2 GINS2 Homo sapiens GINS complex subunit 2 (Psf2 homolog) (GINS2), mRNA. 0.0 715 82.07 0.194105151354222 TCONS_00085421_2 sp|Q9Y248|PSF2_HUMAN PSF2_HUMAN DNA replication complex GINS protein PSF2; 1e-130 369 94.59 0.994594594594595 1 coding 0 0 0 0 -0.318398517427118 0.0819521818112353 0.0216337405020941 0.685163353328428 AGGGCTCCTTCCGGTCAGGGGGCGGGCTCTGCGCGGTGGCGGGAAAGCGGCAGACACAGTGGTGTTTTCTCGGAAACTGAGGGACCTGAGGCGGCGGCGGCGAGCCCTGGGTCGGCCGGTGGCGACGCCATGGATGCAGCGGAGGTGGAGTTTCTGGCCGAGAAGGAGCTTGTCACCATCATCCCGAACTTCAGCCTGGACAAGATCTACCTCATCGGGGGCGACCTGGGGCCTTTCAACCCCGGCCTACCGGTGCAGGTACCTCTGTGGCTGGCAGTCAACCTGAAGCAGAGACAGAAGTGTCGGCTGCTCCCGCCTGAATGGATGGACGTGGAAAAGTTGGAGAAGATTCGAGATCATGAACGAAAGGAAGAAACTTTTACACCTATGCCCAGCCCTTACTACATGGAGCTCACCAAACTGCTGTTAAATCATGCTTCGGACAACATCCCGAAAGCAGATGAGATCCGGACCCTGATCAAGGACGTGTGGGACACTCGCATAGCCAAGTTCCGGGTGTCTGCTGACAGCTTCGTGAGGCAGCAGGAGGCACACGCCAAGCTGGATAACTTGACCCTGATGGAGATCAACACCAGCGGGGCTTTCCTCACACAAGCGCTCAACCACATGTACAAACTCCGCACAAACCTGCAGCCTTCGGACAGCGCCCAGTCTCAGGACTTCTAGGCAGGGACCGCTTGTCCAGGCCCGTGTCTGCCGGCAAGAGGCTCCCCAGGCGGCGTGAGCGTTCGGGACATGACAGAGATACTCACGTTTCTGGAACTCTAGACCACTTCTGAATCTACGAAAAAAAGTACAGTGAAGGAAGGAATGGGTTTATAATCTGGTTGGAAAGCAACAGGCTTACGCTCAGTTGAGACATTCTGTAATTCCTTATCTGTGTCTGGGAGCCAGCTGCCTTTTATGGGGGAAGAAAAAGCACTGGCAGAACGGGAGCGTCCCCAGCAGAGCCCCAGTCTCCTGCACGGGACAGTCGTGTGCAGCTGAGTGTTCAGTGATGTCGGGTGTTGCTTTTAAGATAAGATACAGCAGGCCAGTGACGTGGCCTTTCTCTTGGGCTACATTCAGTCTCCCACAGAGACTGTTCACACCGTGCGGGACAGCCCTGAGCACTCGGCTGGTGACGGTGACCCGTGCTTCTCATTAAGCCCCAATGCACAATAAAGGTGGAATCACCCAGTTCTCTTTGGGTTTTTTCCTGCATCACTCCCGCATGAAGGGAGCAGGCTCAGTGGCTTAAGGATCTGACAGAGCAGACTGAGAGGGTTAGCAGACAGCATGCCCTTCTGACCCCCACTCGGGTGTCTCTTGTTTGCTTGGCTGCTTCTGGGAAAGGGCTAAAAGGTTGTTTATCAGCAAGAAAGTAGGGGAAATGAATTCCATGTGTGTGTAAGTGAAGCTGAAGATGCGCTGCCAGGGGAGAACGGGGCCTGTGCGGTGGTTCTTGGTGGACTGAGGGGACAGCCTGCTTGAGGCAGCCGTGGCTCAGGCCAGAGTCCTGATTTTCCCTGGGAGGAGAATCTTCAGCTGTAGCACCACTTGATTCCTTACAGAAAGTACTTTCCCTCAAGTCAGGGGCGGGGGGCAATGACTGTCCAGTCCTGTAATGAGTGGGTTCAATCTCCAGCTGGTTCTCGAGGGTTTCTGAAGCGGGGGTATGTGTGTGATCATGTGACCAACTGGGCCCTGCTGGTGTTTTGACCCTTCAGCGTTTAAAACTCAAGTGACTTCAAGTTACCTGGGCGCTATTCGTCCATTCCAGGTGGGTCCCCAGATGTCCCTCTAAACAGCAGCTCGTGTTTAAACACTGAAGGAAGGGCCACACACAGAGGGACTATGACCCAGAACACTCGGTCTCCATAGTTTCATCCCTTCTCCTGAAACCAGGCTGAGGTCCAGTTGAATCTGTCTTCACACTTTACTTGTAAAGCTGTAGAATTGTTATTTTTTCCCCCTTACTATAACATAAAAAAGATTTTTCTCTTAACATGATTTAGGAAGATTTTATTTTCTGGATGTTGTCAGAAATTACAGCAATATATTCATAAATACCTAATTACTACATTCAACAAATAATATTACAATACAGTTAATTCAAACAAGTACACTTAGAACAGGTTTAATTTCACAGCATCTAAACTGCCCCCAGAGTGACCGAGGCACCGTTCCTCCTCCCCCGAGTCCTGGTTGGCTGTCCTGGCAGTTAGCAGCACCACGGGCTGGTAGCATGGGCCTCCTCAGCTCAGGCAGAGTTAAGGGGTCTAGTTCAGCACTGGATCGGAAGCTGGGGGACAGGCTACTGCAAGCAGTGATGTCGATAGCGTGGCTACTAGAAGAGTAGGGGGCTGCTGCTAAGTGGCTACTCTACACTGTAAGAGGAGCAACTTCCTGTGCTAGCCATCCCCATCTGGTGGTGGGTCCCCGGAACTGTCTACACTTTTAAACCGTGGCTCAGAGGGAAACGGGGTATGTGGCTTAGATTTAGAGATGGGGCAGCATCGCGAGCTACTCGATGGAATGCCACCCCACGCACAGACTCAGATTACCTGTTGTTATTCTTTGCTAGTTTGCTAAAGGGGGCTCCTTTTAATAGTCTTTGAATTTCCCTGAGGATATAATCTTTATTAGCACTTTGCATGCTGCCAATTGTTGCATTTCCTTTAGAATATAGACTAAACTATTGGTCATTTATGTGAGATAATAGATTATGATACTTTATGCCAGTTTGCCTGTTTCTATGAAACACTCATTTTCAAATGATCAAGTCGTGCAGTGCCAAGTGTGGGAGGGAAACTCTAGTTACTACTGATCTGATTAAATGCACAGAGCCACACGACTCAGCTTTGGCAGGTACCCCTCAAATTTAGCAAAACTCCGTCAGGTCACAAAAATGCTGACACAAAAGTTCCAGAATCACTTCGAGAGAAAATTTGCTATATTTCTGAACTTTGTCTTTCAAAAAACTCAATGTGAAATAGCTGAACAAAAAGCTTTAGGGATTCCATATTTGTCAGCTTTTAAGCCTAAACTGAAAAAAGACTGATGCTACTCACTGTTCTTTTGGAAGAAGAGTTTTCAGGTTATAAACTGTTCAGTGGGGGGCATGATTGGGTATGCTGTCTCCCAGAGAGGCGCACTTCTGTTTTCACAAGACCCTCTGTTACCTTTTTCTTTCTTCATGTTGCCTTACTGGTCTGTATTTATATTCTGATTGTCATATTACTTGTTGAGCCCTAGGATATTCGGAGATCCTCACAGGTAGGTGGGGGAGGGGGTGCCACTTGGAAGGGGAAAGCTGTTAATACCCGCTCAGGGACAGAGCTGCCACCCCTGGTCAGCTGTCCTTTAACCTGTGTGCCACGAACTCCTCCCCAACCAACACACGGCAGCCAAGGGCGCCCCCCGCCAGGTGGTGAGGGGTCGGGGCTGTGCTTTTCCCATCAGGTCTGTTCTTCCCTTTGCTTCTAGCCAAGGCCCTTTACCAGCGCCCAGGAGCAAAGGCATCCAGACGTTTTCTATGATGGAGGAGGATGACTGGTGGGAAGTGCCAAGATGTAAGCCTTAGGCCTTCAGAACAGCAAGCAGGTTCTAAACAGAGAAATTCAGTGATGTTTTGCCCTGCCTCTTGGCAGTGGGGCTCCCTCTAAACACCTGTCCCCACCTGTGGCATGTGGTGCTCTCCGTGTCTCTGCTGGGAAGAGGCCCCCAGAACAGCTCTCAGTTCTCAAGTCATTTCTGTAGAGAG EMBV3_01586 TCCTGGGATGGAGCCCTTTACATCTGGAACGTGGACACTGGGAAACTAGAGAGTAGCCTT Gene GeneID:511036|ATG16L2:XM_002693450:119_cdna Constitutive 0 NULL GeneID:511036 15 GENE ATG16L2 NULL ATG16 autophagy related 16-like 2 (S. cerevisiae) EMBV3_42898 GGGTTGGCCTGTGAAAAAGCTTAGGATCCTCGTTCTCTGGCTTTAGGTGTTGTTCGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42336 TGACGGCGTATCAGAACCACCAGATCACCCAGCTGAAAATTGCCAGCAATCCTTTTGCCA Gene GeneID:618314|TBX10:XM_002699400:421_cdna Constitutive 0 NULL GeneID:618314 29 GENE TBX10 NULL T-box 10 EMBV3_25409 GCTTCCCTAGAAGCTGGGACTCAACGTGTGTAAACATCCTACCACACTAAACGTCACTGA Gene GeneID:507115|BIN3:NM_001075299:61_cdna Constitutive 2 NULL GeneID:507115 8 GENE BIN3 MGC140433 bridging integrator 3 EMBV3_33560 CAGGAGAGACACGCTTGAGGTGGACTTGAGGTGGTTTTATTTTGTTGTTTCTTGTTCCCG Gene GeneID:506132|CH25H:NM_001075243:22_cdna Constitutive 0 NULL GeneID:506132 26 GENE CH25H MGC143045 cholesterol 25-hydroxylase EMBV3_23567 TCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCATTCCC Gene BVV0101_059156 - 1 EMBV3_43389 GK000001.2:45091485-45281233 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061493 TCONS_00166913 TCONS_00107436 TCONS_00036105 TCONS_00055707 TCONS_00056144 TCONS_00174805 TCONS_00171428 TCONS_00061496 TCONS_00174806 TCONS_00061492 TCONS_00071091 TCONS_00036106 TCONS_00123823 TCONS_00061494 TCONS_00061495 TCONS_00174808 TCONS_00174809 TCONS_00000529 TCONS_00174807 11 XLOC_036985 XLOC_101749 XLOC_063346 XLOC_021081 XLOC_033515 XLOC_033947 XLOC_104695 XLOC_103815 XLOC_042864 XLOC_075375 XLOC_000141 Coding TCONS_00123823 XLOC_075375 NonCoding NonCoding - 21:34656367-34662647 - TSS92582 6280 3 TCONS_00123823_4 92 0.992675159235669 1 0 3.77134517527418e-05 4.21711484909763e-05 6.36514048010475e-05 3.23976139061837e-05 6.15331922129947e-05 3.61700959405924e-05 1.61526940260824e-05 6.0735715796653e-05 3.88954490514635e-05 0.00595356662766109 0.00300315911924533 0.00173409760772519 0.000118225667385741 0.000425361799399912 0.000169227460384902 0.0482497752055065 0.0251893156191683 0.0387135172272996 1.57274342601737e-05 1.68872656173388e-05 1.65937901894413e-05 0.0286143890436025 0.0366562465344312 0.0402979952275959 2.89694279046929e-05 2.21167479186835e-05 1.12648953241591e-05 0.0178434173707148 0.010300482077611 0.0272490970592757 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1490 91.55 0.167197452229299 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 3e-30 140 64.52 0.133917197452229 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 TTGTTGTTGAATCACACGAATACACCAGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTACTTCTGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGTAAAAACAAAACAACCAGAATTAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTACAAAGTGTTTGCACCAGTCCATTCTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCATGGGAAGCCTTTCACTGACGAAGAGGGGAGTGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAAGAGTGAGCCCAGGACAGGAGGACATTGTCTTGAGGATCCAACGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCATAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGGCTAATGAGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCGTTTTTCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTTCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGCCCCAATTACTCGTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGTCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCTTCTGTCTCAGCACAGAGCAAAATATCTACATATTGTAACACCACTGCTTCAGAGCTGTTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTGCCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCCTTAACTTCATGTTTCAGTGGATAGTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTCATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGATGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACACCTCTGGGGGCAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGAGCATTTTTCTCAGGCTATTTAAGAACGTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGACTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCTGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCATTCTCCCTCTTCCCTACTGATTCATTACCAAGCCATTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGATCATAAAGCAAAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCTGGTACGGGGGCAAAGGAAGAGGACAGGAGGGAGCTGAAGGTTTCACACCCAAATCTATACCCTTAGGACGTAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGTAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAGGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCGCCGTACTCGTCCCTCCAGGTTCTACCACCGGGATGGGGTGGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACCGCTGTAGGAAACATTCGTCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGACCACAATAAGACCGACGCAAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCTGGCATTACCAAAGAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTCCGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACGAATCCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATATCTGGTCGGTTCCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAATGCCCCGACAGGTTTCTGCCATAAGCTGTATGAGATCACCATGGAACCGCAGAGCAGGGCCCCTTACTTGCTTCATGCAGGGCATGCCATTCATTCACACAAGCACACGGTAGAGTTAGTAAAGCATGGCAGAAAACGTGTTCGCTAAGAGAACAAAGAACTAAAGCTCCAAGCTTCCTTACCTTGTCCTGAAGGATCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACACGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 4739 TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 11018 EMBV3_03617 CAGAAAATCAGAAGAAACTCGCCATGTTAAACGCTCAAAAGGCAGCACACGGAAAGTCAA Gene GeneID:785769|SPATA13:XM_002691861:164_cdna Constitutive 0 NULL GeneID:785769 12 GENE SPATA13 NULL spermatogenesis associated 13 EMBV3_40076 CACCATGCAAAACCTCACCACAGTATCTGACTTGGCAGAGAAGCAACAGAGGAGGCCCAA Gene GeneID:530513|LOC530513:XM_002699477:67_cdna Constitutive 0 NULL GeneID:530513 X GENE LOC530513 NULL similar to fibronectin type III domain containing 1 EMBV3_12699 CTTCGTCATTGCCTTGGGTGGTGGCTGCTTCCTACTGACTGCGCTGTACCTAGAGAGAGA Gene GeneID:516041|SPNS3:XM_002695791:319_cdna Constitutive 1 NULL GeneID:516041 19 GENE SPNS3 NULL spinster homolog 3 (Drosophila) EMBV3_21798 GCCCATCCGGAAAATTCGATGGCCTGAGCACTTTTAGGTCTCATTACGTGCCCCATGAAC Gene GeneID:538044|LOC538044:XM_002696620:158_cdna Constitutive 0 NULL GeneID:538044 21 GENE LOC538044 NULL similar to T08G11.3 EMBV3_04665 GTGACCATCGGCATTTGCAGTTACTCTGCTACCGCCTTCCTCATCAACAGTTTGCCTCGT Gene GeneID:788029|SCGB3A2:XM_002689301:155_cdna Constitutive 0 NULL GeneID:788029 7 GENE SCGB3A2 NULL secretoglobin, family 3A, member 2 EMBV3_17699 GAGAAGTTATCAGTGGTCTCCGTCAAAATAGTTCTCTGCCTTTTCTTCGAACGCAGCAGC Gene GeneID:788957|WDR27:XM_002690399:18_cdna Constitutive 0 NULL GeneID:788957 9 GENE WDR27 NULL WD repeat domain 27 EMBV3_30349 CAAGATGGTTGAAGAAGTAGTAGTTGGTTGGCCGAGGTCAGGTGAATATGGCGGATGAGG Gene BVT0102_351824 + 0 NULL GK000013.2:61683598-61726124 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00043334 TCONS_00043335 1 XLOC_025915 NonCoding TCONS_00043334 XLOC_025915 NonCoding NonCoding - 13:61686613-61693659 - TSS32071 1234 1 TCONS_00043334_5 92 0.0713128038897893 3 0.825266146202981 0.00142150780206452 0.000502585228278635 0.00139850123892833 0.000198333338842308 0.000157823010350176 0.000275381073072785 0.00136680824665585 0.000668202857242925 0.000778623451293756 0.000283411576198509 2.08158395776788e-05 2.79801150270949e-06 0.000109283963536571 7.03941219793088e-05 0.000470392350083918 0.000315338803637417 0.000228300459672753 1.60589404794724e-08 0.00065749841612671 3.7776813588658e-05 4.82919917206149e-06 7.79737066594616e-05 0.000267638422097945 0.000176196387269301 0.00100781714482363 0.000340514138199996 0.000352060661751976 2.30720417750588e-05 4.31302263054515e-05 0.000158170410306393 XR_227603.1 LOC101906008 PREDICTED: Bos taurus uncharacterized LOC101906008 (LOC101906008), 0.0 1945 100.00 0.872771474878444 NM_001243723.1 SETMAR Homo sapiens SET domain and mariner transposase fusion gene (SETMAR), transcript variant 2, mRNA. 0.0 1097 82.80 0.813614262560778 0 noncoding GAGCGGTGGGGCGGGGCCCACAGTGGGCCCGCCCCCCGAGGGGAGGGCCGGGAAGGCCGAGACCTTGTGAGCCTGGGAATCCCGGCTCTGCCGCCTGCCATGTTTCCTTAGGCAAGTCTGTTTCCGTCTCCGTGCCCCAGCTTCCCCAATAGTAAAGTGTCATCTCCTGTAATACCCAGACAGCCTCCAACCTCTTTGTCATTTTAAGGCAGACCAGACTATGGAAATGATGTTAGACAAAAAGCAAATCTGAGCAATTTTCTTACTTGAATACAAAATGGGTCGTAAAGCAGCAGAGACAATTGGCAACGTCAACAACACATCTGGCCCAGGAATGCACAGTGCAATGGTGATTCAAGAAGTTTTGCAAAGGAGATGAGAGGCTTGAAGATGAGGAGTGCAGTGGCTGGCCATCGGAAGGTGACAACAACCAATTGAGAGCAGTCACTGAGGCTGATCCTCTTACAACTACACCAAAAGTTGCCAAAGAACTCAGTGTCAGCTATTCTACAGTTGTTCGGCATTTAAAGTAAATTGGAAAGGTGAAAAGGCTTGGTAAGTGGGTGCCTCATGAGCTGACTGCAAATCAAAAATATCGTCATGTTGAAGTGTCATCTTTTCTTATTCTATGCAACAACAACCAACCATTTCTCAATTGGGATTGTGACCTGCAATGAAAAGTGAACTGCATACAACAACCAGCAATGACCAGCTCAGTGGTTGGAGTGAGAAGAAGCTCCAAAGCACTTACCAAAGCCAAACTTGCGCCAAAAAAAGGTCATGGTCACTGTTTGGTGGCCTGCTGCTGGTCTGATCCACTGCAGCTTTCTGAATCCTGGTGAAACCATTATATCTGAGAAGTATGCTCAGCAAATCAGTGAAATCACCAAAAACTGCAGCCGGTATCAGTCAACAGAAAGGGCCTGACGAAAGGTCGCACAACCAAAAGTTGAAGGAATCGGGCTACGATGTTTCGCCTCATCCGCCATATTCACCTGACCTCGGCCAACCAACTACTACTTCTTCAATCATCTTGACAACTTTTTGCAGGAAAAACACTTCCACAACCAGCAGGATACAGAAAATGCTTTCCAAGAGTTCGTTGATTTCTGAAGCATTGATTTTTATGCTACAGGAGTAAGCAAACTTATTTCTAGTTGGCAAAAATGTGTTGATTGTAAAGGTTCCTGTTTTGATTAATAAAGATGTGTTTGAGCCTAGTTATAATGACTTA TCONS_00043328 TCONS_00043331 TCONS_00043332 s 3' 3015 TCONS_00043328 TCONS_00043331 TCONS_00043332 s 3' 3015 EMBV3_36031 GGCTGAGCTGGATTTGTCGAGTGAATGTTGTACTAAAGCTGAGTCCACCGCTAATACGTC Gene BVT0102_381643 + 0 NULL GK000011.2:3265590-3366419 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029668 1 XLOC_015927 NonCoding TCONS_00029668 XLOC_015927 NonCoding NonCoding - 11:3266237-3267125 - TSS20667 888 1 0 0 0.000271579638339593 5.21059080120087e-05 9.35151592605373e-06 0.000233515445890502 0 0.00145792502019794 0.00134546502369186 0.000941840021253081 0 0 0 3.23117462320276e-06 9.53514060543262e-05 0 0.000267684960288149 0.000205658879045951 0 0.000387617929117997 5.66891569432233e-05 0 0 0 0 0.000366710473777928 0.000182483898117809 0.000257326968145982 0 0 0 0 noncoding 0 0 0 0 -0.366284966840124 0.0333617891738769 -0.0300626357125854 0.610800967494776 GCTGGGGGAGGCAGGGCGGCAGCTGAGAAGCAGGCAACAAACGCCTGCATCCCCTGTACTGCATTGCGAGAGCCTTCCAGAGAACTGAGTGCGCGGACCTCGAAGTCTAGCGCGGAAAATCCATTCCAGTGTCTCTTCCAGGCCACACCCCCGCTTCTCAGCCGTTTCGAGAATACCCGGGACCTGTTTCAGTTTCCCGGTGGCGCTGCCTTGGGGACGGGGACCTGCACTGTTCATCTTTGCACTCTTGAAGATACAGCACTCTGGAACGCTTCGTGGAATTCTCCTGCACTTGGATTGTGCCGAGTTTGCTGTGGGAAAGCCCTTTGCTGTGTGTGTGTGTGTAAAGTGGCAGTGGCTGACTTTCTCCAACTTGGAATAATTCTTAATACATTTTATTCACCTGTTTCCTTCAAGGCCCAGCACAAATCAGAAAGCCACCTGATTTGAGCCTCTTAGAGGCCCTTTTCATCCTAGGTCAAGGTTCTTCTTGGGCGTGGCTGTTCTCTACAAACTTTCTCTTTAATCAATTAGTAACTTCCCCTCACTCCTAATTTAGTAACTCTTTTAGTAACTTCCCCTAACTACAGAGCCGTTCACTTAGGCTGAGCTGGATTTGTCGAGTGAATGTTGTACTAAAGCTGAGTCCACCGCTAATACGTCCTGAAACAAACTACGTGGGAAAAATAAAATTTCAAGAAGCTATACAAAAGAAACTCAAAAGTACTACCCTCTGCAGTCGTCTTCTTTGTCAAGCAAGCACTTTATATTTTTTAAGAGCCTTCACCCTGATTTTGAAAAGCAATTTTACTTTTCTGATTTTTAGAGTAAGAATTTAATTGAATTTTGTTCTTGATGTAATTAAATAGGAATAATTAGTATCATCTC TCONS_00026672 TCONS_00026673 TCONS_00026674 TCONS_00026675 TCONS_00026678 . 5' 94 TCONS_00026672 TCONS_00026673 TCONS_00026674 TCONS_00026675 TCONS_00026678 . 5' 94 EMBV3_23217 TAGCCCTTATGTAACTGCGAGTTGAGGAGGGAGATATACTAGATAGCAGAATTTGCAAGC Gene BVT0102_086789 - 0 NULL GK000004.2:43384488-43549367 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00183761 TCONS_00183770 TCONS_00183776 TCONS_00183759 TCONS_00183766 TCONS_00183767 TCONS_00183760 TCONS_00183775 TCONS_00183758 TCONS_00183757 TCONS_00183769 TCONS_00183762 TCONS_00183772 TCONS_00183765 TCONS_00183777 TCONS_00183774 TCONS_00183773 TCONS_00183763 TCONS_00183768 TCONS_00183764 TCONS_00183771 1 XLOC_111208 Coding TCONS_00183758 XLOC_111208 Coding Coding PHTF2 4:43547367-43641472 j TSS137008 4586 1 TCONS_00183758_3 610 17 0.951447334863555 0.00380567703911823 0.00166114749571847 0.00113299560534937 0.00170811295856058 0.000326691268804949 8.28890081790807e-31 0.0024218505343563 0.00194728070633295 0.00325749884374456 8.87139101722312e-08 1.88303558566881e-06 0.000481649464725434 1.72656290748248e-26 0.000101265779827639 0.00025746932644843 0.00304218883350929 0.000465277733038644 0.000493934454257129 0.00193528308754971 0.000863447654266568 0.00122814174386113 0.00127825065804239 0.00149164669875371 0.00353981554210769 0.00106586618705587 0.000493684600172806 0.00368563409707646 0.000281418566387171 0.000260404148146719 2.05817373376057e-12 XM_005205348.1 PHTF2 PREDICTED: Bos taurus putative homeodomain transcription factor 2 (PHTF2), transcript variant X2, mRNA. 0.0 8251 100.00 0.997383340601832 NM_020432.4 PHTF2 Homo sapiens putative homeodomain transcription factor 2 (PHTF2), 0.0 6433 91.33 0.996511120802442 TCONS_00183758_3 sp|Q8N3S3|PHTF2_HUMAN PHTF2_HUMAN Putative homeodomain transcription factor 2; 0.0 1199 96.72 0.998360655737705 0 coding 0 0 0 0 0.0110703474993004 0.931892384335912 0.0010481053364958 0.981703443203809 GGATTGGAGCATATGATCAACAAATATGGGAAAAATCTGTTGAACAAAGAGAAATCAAGGGGTTAAGGAATAAACCAAAGAAAACAGCCCATGTGAAACCAGACCTCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCTAAGGCAAAACCCGAAAGTCCGTGGACTTCTTTAACTAGAAAGGGAATTGTTCGAGTTGTATTTTTTCCCTTTTTCTTCCGGTGGTGGTTACAAGTAACATCAAAAGTCATCTTTTTCTGGCTTCTAGTCCTTTATCTTCTTCAAGTTGCCGCAATAGTATTATTCTGTTCCGCTTCTAGCCCACATAGCATACCTCTGACGGAAGTGACTGAGCCAATATGGCTGATGCTGCTCCTAGGAACTGTGCACTGCCAGATTGTTTCAACAAGAACACCCAAACCTCCCCTAAGCACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAGGAGGGAGCAGTTCAGAGCCACGGTACAAGCACCTCTTACAGTGTTGGCGCTGTCTTCAGAGATCTCTGGCATGCTGCATTCTTTTTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAGACTGACAATGGCTATGTATCCCTTGATGGGAAAAAGACTGTTAAAAGCAGTGAAGATGGAATACAAAGCCATGAACCTCAGTGTGAAACTCTTCAACCAGAAGAGGCAACCTGGAACACCGGAACACTGAGGAACATCCCCAGCAAAGATACCCAAAGGACAGTAACAAATGTCTCTGATGAAGTCTCCAGTGAAGAAGGTCCAGAAACAGGATACCCATTGCGCCGTCATGCAGACAGGACTTCTGAGAGCATTCTTCGGAATAGGAAATCACACCATTATAAGAAACATTACCCTAATGAGGATGCCCCTAAATCGGGTACTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAACAGAAGATGTGTTATGGGAAGACTTGTTACATTGTGCAGAATGCCGATCATCTTGTACCAGTGAGACAGATGTGGAAAATCCTCAAATTAATCCATGTGTGAAAAAAGAATATAGAGACGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCCATAGTTCCCACCCAGGATTAGAAAAAATAAGTGCTATCGTATGGGAAGGCAATGACTGCAAGAAAGCAGATATGTCTGTCCTTGAAATCAGTGGAATGATAATGAACAGAGTAAACAGCCATATACCAGGGATAGGCTACCAGATTTTTGGAAATGCAATCTCTCTAATCCTGGGTTTAACTCCATTTGTTTTCCGACTCTCCCAAGCTACCGACTTGGATCAACTCACAGCACATTCTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAGATGTTATAGTTCTTTCTATGGTTATAATAAGTTTTGTGGTTCGTGTGTCTCTTGTGTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAACTTATAAACAGCGATTACTTTTTGCAAAACTCTTTGGACATTTAACATCGGCAAGGAGGGCTCGAAAATCTGAGGTTCCCCATTTCCGATTGAAGAAAGTACAGAATATAAAAATGTGGCTCTCTCTCCGATCCTATCTTAAGCGTCGAGGTCCTCAGCGATCAGTTGATGTCATAGTTTCATCTGCTTTCTTGTTGACTATCTCAGTTGTATTTATCTGTTGTGCCCAGTTGCTTCATGTACATGAGATCTTCCTTGATTGTCACTACAATTGGGAACTGGTAATCTGGTGCATCTCGTTAACACTTTTTCTCCTAAGATTTGTTACCCTTGGATCAGAAACAAGTAAAAAATATAGCAATACCTCAATATTACTTACTGAACAGATAAACCTCTACTTGAAAATGGAAAAGAAACCTAACAAAAAGGAGGAATTGACACTAGTGAACAATGTTTTAAAACTGGCTACTAAATTGCTAAAGGAATTGGACAGTCCCTTTAGACTATATGGACTTACAATGAATCCACTGCTTTATAACATCACCCAGGTTGTCATCCTGTCAGCTGTTTCTGGTGTTATCAGTGACTTGCTTGGATTTAATTTAAAGCTCTGGAAGATTAAATCATGACAATTCAGAGAAAAGAAGATGTAGCCTCTTTTCCAGAATAAGAGTACCAACTAAGCTGCCTGAAAGCAGTCACTGACTCTTTGCTTCAGGAATCTCAGCTGAGAAATTGAAGTGTTTACATCAGACTGTCCTGTGCAATTCTTATATTTATTTCACTTGTTCACTGTTTTTTACATTTATTTTAGTCTTTATATTTTATTTTTAGCATTGATATACTTAGTTGTTGAAAGGGTGATGAAACTGATGTCCACATACTTGAGATCCTGGTAATTGCTCATAAAAAATGACAACAAATTGTGAGAATAGAAGCCATTGCTAAACACTGTTTCTCCATCAGTGCCGTGACTTGCCTTACTTGAAGTAAATTTCTTTAACTTTGTAATCTTGCATTAGACTCAACTAAACACATAAAACATTTTTCTTTAGTAAATCAAGATCCAGTCCGGGTTTCTTTTGAGTTATTTTGGAACAATGCCAGGATCTAAACTGATAAAGCTGCAGTTTAAGCACCCTTCAGTATTAATATCTATGGTATTACACAACAGGTCAACAAGTGCTCTTTGATGATAAAACTCTTAATAGAGCAATAATTGTAAATGGTTACCATACTGTAAGATATTTTGATAAAAATTAGTAATAATTGTATTTATTTGAAACACTGGGCTGTTTGCACAGCTCCAACTGTGCATGCTCAAAATGTGCACTTTTTAAAATTGTTACTTTTAATGTGTGTCTTTATATGGGGTATGTTATAGTGTACTAGGGCATGATATGGTATCCTTTTGAGTGAGGTATATACTCATCTCACAAGTGAAGTGCCTATTGATATTACTCAAGTATGTTATGTTTACTCAAGTAAAATAATTTTCTCCCCATGGTACACTATAGTGTATGCTATTCATACCACACTCAAATGAACAACTTAAGAATAACATTGAGAACCAATCAGATATTCCTGATTGCTAGCTGTAAAACTATATATGAGTTTTCAGGAAAAATAGCGATAGCTTGCAAATTCTGCTATCTAGTATATCTCCCTCCTCAACTCGCAGTTACATAAGGGCTATTTTAGATGCTTTTAACCTAGAAAGTAACCCCCTCCCTCCCCTCCAAATAATTTGCCAAGTGTCCAAATGAGAACTTATCTGTTGGCATGTTAGGTAAATAGGGCAAATATGATGGTCTCTTACATTGGGCCTTGATTTTAAGTTGTTATATTTGTACAATCAAATTTTAGGAGTCACATGAAATACTAAATGTTTTAGCAAACTTTTTTTTTTTTAAACTGGGTGTCTAGTTTTTAAAAGACTTTATTTGAAACAATCTAGAATTTTCTTGGTGCAAGTTGTATCATGTTGAATATCCTCACCTTTTTTTACCATGTTTTAGAGAATTTAAAATAATTAATTGTAAATGATTTATTTGACTGGTGCAGTTTTAATCCCCAAATCATAATCTTAAGATCAGGAATGTGTGGAGAACAGAGCCATATCATAATATCACTTTGCTCTCACCATTCCTTTTGATCAGCCTCAAATCAGCCTCATTGTATAGTATATTTTCTTTCTATAGAAAACAAAAACATTTTGTTTTATTTGCCTATGTTCTAATATGTTTAATAATGACCAAAGTGCATTCTGAGTTTTTTCAAGGAATGTATTACTGGAGCTTTAAGAACATACTTATTTTCTCCTGTGAAAAATTAGGCTTTGTCTGATATGTTTATTCTTCCTCTATTGTCTAATGTTGAGGTTGTTTTTAGGAATTATATTTTATAAAGTTTTTCAAGATAAGGTACATACCTATACAGAACTTAACATTTTGCACAGAATATATTGAATATATTTTGAGAAAAAAAAGTACAGCATGAGTTCTGTTAGGAATAAAAATGAAACTATTGTATCTCACAAAAAAAATCTTATTTCAGAATGGAAATATTTTTGAGAAAAGTAGCTGAGTAAACTGATTTAGGAAAATGCTTGCTTTTTGATTGAAGTTCATTTCAACTTGGAGTTGGGAGTTGATTTATTAAGTACAGTGTACCTCTCAACATCGTATTAATAATATGTTGAATTATGTCACTAGTATGGCAGCGGTAGAATACTAAGAGGGCAAAGTTGTCATTTTAAGTAATTTCAGAACATTAATGGAACTCTTTTCAAAGCAGAAAAATTGACATTGCTGCCTTTAAGAATACAATGAATGTAAGAAATTAAAAGAAATTGTAACATACCACATAATATAGAAAAGACAGTTCAAAGATAGAATTGTGGCAGATGTTGTGTGTTAACTGTTGTTTCTTTGCCACATGTATCGTATTTGAAAGTTTGAATGGCAAGTTTAAAATAAACGTTCTATGACTGACAGTGTTAAACCTGGAGTGGG EMBV3_07526 AACTAACAGACCGAAAAAATCCAGAATCAGAATGTCACAGGTAGATTAATGGTTGGCCTG Variant GeneID:513550|FAM18B:NM_001046152:24_cdna 102^246 3 EMBV3_38021 GeneID:513550 19 GENE FAM18B MGC137873 family with sequence similarity 18, member B EMBV3_40058 TGGCCAAGCTTCATTTTCTGGAGCTGTTTCACCACAGGCTCCCAGGCTTTGATGATTTAA Gene GeneID:788063|QSOX2:XM_002691616:263_cdna Constitutive 2 NULL GeneID:788063 11 GENE QSOX2 NULL quiescin Q6 sulfhydryl oxidase 2 EMBV3_37590 AGGTGAGGCTGAACGAGATTCTGCTGGATTATTCCCGAGATGCTGCTCTGGTTGTCATCA Gene GeneID:404171|SLC12A3:XM_002694788:606_cdna Constitutive 0 NULL GeneID:404171 18 GENE SLC12A3 NULL solute carrier family 12 (sodium/chloride transporters), member 3 EMBV3_24868 GTGGCAGCAAGAGGAAAAGCGATAGCTCAGACTCCCAGGAAGGAAATTACAAGTCAGAAG Gene GeneID:518540|MEOX2:NM_001098045:29_cdna UTR3_Alt 2 NULL GeneID:518540 4 GENE MEOX2 NULL mesenchyme homeobox 2 EMBV3_04221 GGCCATGAAGAAACTTATGTATCTAATTAGAAGTTAGAACATGTTTACTTGATCCTTCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42703 CTCCCAGGGTGAGCCAGTCACCAAAGAGGTTTTTCCCACTAAAGAAGCCTTTCAGCTGCT Gene BVV0102_045596 + 0 NULL GK000021.2:27297775-27322046 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40249 AGCGGGGGAAGAAACTCTACACGCCCAGCGGGAATGTTCCCTTGGTCATTCCTGTATTCT Gene GeneID:505501|TMEM177:XM_002685440:51_cdna Constitutive 0 NULL GeneID:505501 2 GENE TMEM177 NULL transmembrane protein 177 EMBV3_22157 CGCAGATACGAATACGACCACTGGGATGCGTGCATGTGCTGGACCTAGAACCTCAGGGCT Variant GeneID:535305|ALKBH7:NM_001046402:72_cdna 222^336 4 EMBV3_41657 GeneID:535305 7 GENE ALKBH7 MGC137333 alkB, alkylation repair homolog 7 (E. coli) EMBV3_42668 GGCGGCCGAATCTTCCTTCAGGATATCAAGCTGTGTGATTTCATTGAGACTCATTACCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22332 CCCCTGTGTAAGGAGCCGGGAGCTGTAGCCTTGTCATCTGGGTGATTAGCTTCAGACCCT Gene GeneID:100294916|LOC100294916:XM_002692580:292_cdna Constitutive 0 NULL GeneID:100294916 14 GENE LOC100294916 NULL hypothetical protein LOC100294916 EMBV3_10209 ATATCTTCCTGTTTGTGCCTAACCTCATCGGGACCCGGTTTGGGGCCATGCTGGACATGC Variant GeneID:515135|CDIPT:NM_001034482:332_cdna 394^528 1 EMBV3_40523 GeneID:515135 25 GENE CDIPT MGC127038 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) EMBV3_07662 GAAGCTGAACACGTCAGAGACGCATCCGAGGATCACAATCAGTTCTACGCTGCCAAAGAT Gene GeneID:510714|FRMD4A:XM_002692099:308_cdna Constitutive 0 NULL GeneID:510714 13 GENE FRMD4A NULL FERM domain containing 4A EMBV3_32964 AAGAGTAAGGACCGAACAAGAAGTGCTGAGGAAATGGGAAATGGACACGTGGACAGAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13947 CTTCAGGTTCTAGGGGCTCCTGTCTCAGGGATTTTCTGGACCAACCATCTGTGGTCTGAA Gene BVT0102_351702 + 0 NULL GK000006.2:105166799-105171715 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27578 GAAAGGGGGCCAAAGAGGCAATGTTGCAAAAATCTGGATGGCTGTCTACTTTCTCCTTAG Gene GeneID:540737|PAF:NM_001015678:115_cdna UTR3_Alt 1 NULL GeneID:540737 10 GENE PAF KIAA0101 KIAA0101 protein EMBV3_19447 GAGACTGAGAGAACCCCTAGCCTCCTTATTCTGACTCAACAACTAAATCGCTCTGGGTGG Gene GeneID:781275|MGC151586:NM_001082467:219_cdna Constitutive 0 NULL GeneID:781275 23 GENE MGC151586 NULL similar to chromosome 6 open reading frame 26 EMBV3_21345 GATCCCTGCAGGAAATGCCTGTGGAGTGCGGCAATTTGGCAAAGTCTATGCCACACTTAA Gene GeneID:100336578|LOC100336578:XM_002686854:44_cdna Constitutive 0 NULL GeneID:100336578 4 GENE LOC100336578 NULL homeobox A11-like EMBV3_25528 TACATCAAGCCACACGTGGACAGCATCAAGGGGCTCGGCTCGTTATGACTTCTCCCACGA Variant GeneID:535305|ALKBH7:NM_001046402:72_cdna 396^520 4 EMBV3_06133 GeneID:535305 7 GENE ALKBH7 MGC137333 alkB, alkylation repair homolog 7 (E. coli) EMBV3_20599 AACTCATCTTCCACGTGCCTTACCCAAGATTACAAAGGGAAGGACCACTTACAGAGGGCC Gene BVV0102_059331 + 1 EMBV3_36100 GK000016.2:77478681-77485290 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070287 TCONS_00070278 TCONS_00070275 TCONS_00070295 TCONS_00070293 TCONS_00070288 TCONS_00070282 TCONS_00070280 TCONS_00070281 TCONS_00070290 TCONS_00070291 TCONS_00070289 TCONS_00070292 TCONS_00070279 TCONS_00070294 TCONS_00070283 TCONS_00070276 TCONS_00070277 TCONS_00070285 TCONS_00070284 TCONS_00070286 1 XLOC_042182 Coding TCONS_00070293 XLOC_042182 Coding Coding CD46 16:77483007-77522544 = TSS52219 3548 1 TCONS_00070293_3 367 0.135569334836528 10 0.910511938486443 0.000514436802915483 0.000140475009216546 4.7048429318802e-13 0.000447114198236513 0.000581216934035423 1.66574354498432e-11 0.0001763482848866 2.32699662330183e-05 0.000794690361489074 0.000351841877104458 1.36935584847539e-20 7.21622475544625e-09 0.000114750208351356 9.36911864062227e-06 5.52107766669445e-05 0.00736758246143941 9.94898613129581e-16 0.00268459231923352 0.000383868725198543 0.000725463451281869 0.000109245996935846 0.00160282184760433 0.000317172014654811 0.00220854205594253 7.45619178932662e-19 0.000464300492138817 6.341516904826e-13 0.000241109480844276 6.387166678882e-06 2.49270615172732e-11 NM_001242562.1 CD46 Bos taurus CD46 molecule, complement regulatory protein (CD46), 0.0 6379 99.86 0.999718151071026 NM_172361.2 CD46 Homo sapiens CD46 molecule, complement regulatory protein (CD46), 3e-84 318 69.54 0.219842164599775 TCONS_00070293_3 sp|Q6VE48|MCP_BOVIN MCP_BOVIN Membrane cofactor protein; 0.0 649 99.13 0.934604904632153 1 noncoding 1 1 1 1 -0.0590738893040954 0.645585528967213 0.0103262470072497 0.881914931495199 ATGAGGGCGTCTTGCACCCCGCTGAAGGCGCCGCTCCGCCGCCCCGAAAGACTGGCTTCTTCTGGGCGCTTCGCCTGGGTGCTTCTGCTGGCGCCGCTGCTCCTGCTGCCCACGTCCTCCGATGCCTGTGATGATCCACCAAGATTTGTCTCTATGAAGCCCCAGGGTACCCTTAAACCCAGTTATAGTCCTGGGGAGCAGATTGTGTATGAATGTCGTCTGGGTTTCCAGCCAGTAACTCCTGGTCAAGTCCTGGCTCTCGTTTGTCAGGATAATAATACATGGTCGTCTCTCCAGGAGGGCTGTAAAAAAAGACGGTGTCCTACCCTAGCTGATCCCACAAATGGCCAAGTTATCCTTGTAAATGGAAGTACTGCGTTTGGCTCAGAGGTTCACTATGTTTGTAATAATGGTTATTACTTACTGGGGACAAATATTTCTTATTGTGAAGTTTCTGGAACTGGTGTGAACTGGAGTGATAATCCTCCAACATGTGAAAAGATTTTGTGTCAACCGCCTCCAGAAATTCAAAATGGAAAATACACCAATAGCCACAAGGATGTATTTGAATACAATGAAGTAGTAACTTATAGTTGTGATCCTTCAAATGGGCCAGATGAATATTCCCTTGTTGGAGAGAGCAAGCTTACTTGTATTGGAAATGGTGAATGGAGTAGTCAACCCCCTCAGTGTAAAGTGGTCAAATGTGTATATCCAGCCATTGAACATGGAACGATAGTCTCAGGATTTGGACCAAAATATTACTACAAAGCGACGGTTGTACTTAAATGCAATGAGGGTTTTAACCTTTATGGCAACAGTGTAGTTGTCTGTGGTGAGAACAGTACTTGGGAGCCCGAGCTACCAAAGTGTATTAAAGGACATCCCCCCCGTCCTACTGATGCATCACCCCCTAACGGTGCTGAGGGTTTAGGTGCAGGATACATCGTGCTCGTCATTGTTGCTGTACTTATTGGCGTTGGATTATTGCTCTGCCTGTACTGCTGTTTTTGCAGACAGAGGAAGAAAGGGAAAGCAGAATGTAGCGCTACGTACACCACTTATCAGGATAAAGCAACCACTGCAACAGAACAGATGAACTGAACCGTTTCCAGGAACGCATGTACCATTCAGCCATGAAAATGAAGGAAACCTTGCCATTTGCCACAATACAGACAGACCTGAGGGGACTTTGCTGGGTAATAAGTCATGTAAAGAAAGACGTGTACTGTCTGATCTCACTTACACATGGAATCGAAAAAAACAAGCTTTCACAGAAGAAAAATGAGATTTGTCGATGTCAGCGGTGGGGGACTGGTGGGGGTGGGTTTGAGTAAAGGTGGTCAGAAAATACAAACCTTCAGTTATAGGGTGAGAAAGTACTGGGGTATAATTACAGCACAGTGGCTACCATGAGTTACTCATACTGTATTTATGTTGGCAAGTTGCTAAGAGAGTGGATCTTAAAAAGTTCTAATCACATGGAAGAAAAAAGCTTTTTGTAGTATTGACATTATCAAATCATGCTGTACACCTTAAACTTAACGCAATGCCCTCTCTCAATTTTGTCTCAATACTGAAGGAAAAAAAGTATAAAGATTATTTGCCACTTTCTTACACTGTCAGAAATAAAACTGCTAAGCGATAGCCATAGGAACATTAAAACATTTTAATGTGGCAGAAGTATAGTCACTATTCTGTAATGCTTCTTTGAAACATGTATGAATTTAGGTTTAAACACCTTGCCTGTTTTTCCTTAAATAGCACTTGATTTATGGGGTAGGTCAACATGGCATTCTAAGGTAGGGAAATGTGTTTGTTTTTTCTTCTATAAGATCTCCAAACTCAGAGAAATATATTGAAAAATGACATTACATTTCATTTGCAAAGAAAGTGATTTTGAAATCTTTTTTTGTTCAGAGGTGATTACCAATTCTTAAGGTTCATTCTTTGAGTTTCCTAACTAAGAATATTACTGGAAAATACTCTTACATTGAATAGATTAAAATGCTATTTTTAAAAATGTGTAACCTCGTGGTAATTTAGAGATGCTATTAAGTTTTTATCTGGCATTTGTTCTTCACCCCTTTTATTTATAATAAGCCAGTCTGAGAAACCAAGAATTCAGCATCAGTTTCAGGCTTCTATACAAAGTTAGAGTACTGTTAGCACCCATGGCAATAATGCCAGCTCAGGACAAAGTGAATGCTGTGGCCTTATAGTTTTCTTAAGAAGAATTCCACTTTGTTATTATTATTATTGTACTATAGTTTTTTTTTTTTTTTTTCTTAACAATGTTGTATCTGTTTGTGCTGAAGAATTCTACTCTCTAAGAGAATTAGAATCCACTCTAAAGTCTGGCTCTAGGGGCTTTTCTCTGCCCACTTGGATAAAGATATGTCTGTCTTTACACATGTCATCAGAATGTAAGCAGTTTTGTAGGGAATAAATTCAGCAGATAACCTCAGGTTGTATCAGAATCTTAAGTCTTTGTGGGCTCCTCACCTCATCTGTAAAGGGCAGAGTAAAAATGAAGCCCTGTATTTTAGAAAAGCAAACTCAACTCCGTGGATTAACTGTAGGTCACAGAAAGGGAAGGAAAAAGGAGACAGCTCAGGGGGGGTCTGGACACTCAGGTGGAACAGACCCCAGCCCGCTTCTCTGTCCTCACGCCAACGGCCACAGAGGAGGGACTCTGCTCTGACTCAGATTTTTACAGGTTTTGTTTTACACCTTAAAAAAATTGTTTTTCTTTTTTTTTAAATTTTTTGGCCATACCTTGACACGCAGAGCTATCCAAGCTGAGATCAGACCTGTGCCCCCCACAGTGGAAGCACAGAAACCCAACCACTGGACCACCAAGAAGTGGAAGTCGTCACACTTCATAGTTAGTGGCACACACTGGGCCAAAGAAAAGCTGCCTTAGAAAGGTATGAATGAGGACTCGAGGGTGAACAAGAGTAGATGCTGTTTTTCTCCCTGAGGACATGTTTGTAAGGCCCTCTGTAAGTGGTCCTTCCCTTTGTAATCTTGGGTAAGGCACGTGGAAGATGAGTTTGAGCAGAATAAATTCAGGAATTCTGAGACAAATCCAGAGGTGAAGTTTTGCCGCACCCTTTTTATCACATGCTCTTTAAGAATCTAACAGTTTCTCAGAAGCATGGGGGTGGCTGTAGTATGTATTTCTTAAAACCTCAAGGAAATGTTTTCAACCAAAGTTTATTGTGCTTACCAAAATAGGCTTTCACAATAGTTTCCACTTCAGATTTGGTTTTCCAGTGTAACATAGTTATATGTAAGACTGAAATATGTGTACATATAAATAATGTTCTGTCTGCAAATAACTTGTCAATCACTTAAATATATGGAGAAACCATTTTTTTCTAGAAATGTCTGTCTGAATGAGAGGGAAAAGTGTATTTGAATTTAAACTTAAAACTGCAAGAGTGAATCCCCAGTGGAATGAGACGTCTCATGTCTGTATTGTTTTCTGAGAATTGAACCTTTGAGTCTGTTTAAAAAATAATATGTCATTATGGAGAAGTTTC EMBV3_04563 CACAAAGAGGGACAAGATGGGATCTATTATGGGCCTGGAGAAAAGCATAATTACTTGCTG Gene BVV0102_119953 + 0 NULL GK000026.2:39616180-39631662 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00154235 1 XLOC_093996 NonCoding TCONS_00154235 XLOC_093996 NonCoding NonCoding - 26:39619507-39619880 - TSS115405 373 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000198945663820228 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.00268660525232628 0.983505994831906 0.0182090614084588 0.698108603264743 CCTATTAAACTCAACTAACAGGTATTCAATACCAGCTAACAGCCATAACGTGAGATGCTGGGGATAAAAATAAGCACGATGCCTCCTTTCATAGAGATGATGATTCACTGGTGAAAATAGACTAGTACACAAAGAGGGACAAGATGGGATCTATTATGGGCCTGGAGAAAAGCATAATTACTTGCTGTTGATTAATGCTCACTTAGTGGAAAATAAGCAACCTGAATAATGCTAAAAGCCACTCAGGAAGTGGCAAAAGGATGTAATCAGGCTGATGAAGGTTTTTTCCCCCTAATCAAGCTACGTTTATACTGTATATAACTGGATACTTTCTCTAATACAGTGTTTTGTAGGATTTTTCTGACTTGAGTGG TCONS_00152359 TCONS_00152360 TCONS_00152361 . 5' 3329 TCONS_00152359 TCONS_00152360 TCONS_00152361 . 5' 3329 EMBV3_20584 GTCAGGATGACCATAACTGGAGGAGTGAGCTTTATGCCCAGATAGCCTCTGAACGGTTAC Gene GeneID:511431|ACOT4:NM_001098941:91_cdna Constitutive 0 NULL GeneID:511431 10 GENE ACOT4 MGC160092 acyl-CoA thioesterase 4 EMBV3_00997 GGGGAGGGTACAGAAGACGTTCTTTGGCAGCACATAACTCCAAGGACAATTGTAGCAGGA Gene BVT0102_423467 + 0 NULL GK000005.2:19133518-19276347 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09001 CGAGCCTAGAGGATTTGATCGTTTTTCCTGGTTTGCTGACTGTGCCATATTGTTGTTGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04645 ACACAGGAACAGTAAACTGGGGTACTGAAACCCCCACATGATGACCAGACTGTAGCCATG Gene BVT0102_175974 + 0 NULL GK000013.2:24657890-25331873 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042320 TCONS_00042324 TCONS_00042321 TCONS_00042323 1 XLOC_025643 NonCoding TCONS_00042321 XLOC_025643 NonCoding NonCoding LOC100847616 13:24687304-24812411 j TSS31531 533 1 TCONS_00042321_1 39 0.602251407129456 4 0.99577158569533 0.000153156609227311 3.77028186939684e-05 0 9.44499567197494e-09 4.82128343911591e-09 9.35747715965782e-09 1.0940107668289e-05 4.43869307993334e-05 0.000527161132914663 2.31575949384361e-05 0.00116360835631905 0 1.07660042391721e-05 1.7650191910142e-05 6.89512385252305e-05 0 0 4.70700666787407e-05 5.56833554229189e-05 8.19950226487601e-07 2.6025683517814e-09 0 3.46145229899225e-23 0 1.81297128247933e-09 2.6223613780552e-08 4.3969968747005e-05 9.01024119198927e-05 0.00125691504919887 1.12785756865807e-05 XR_229173.1 LOC101902644 PREDICTED: Bos taurus uncharacterized LOC101902644 (LOC101902644), 4e-47 192 73.49 0.594746716697936 0 noncoding CTGGAACCCAGATTCTAGGATTCAAGAGTCTGCACTCTCCACTGTACAAAACTTCTTTTTCCTGAGTGCTTGGGATCCCTCTGCTTCTTACATCCTCTGACTATGAGGGCTTATTGGACTTCTCGCTGAAACCACCAAAGATGAACAAAGCGGATGGATGGACTTAGTTACTTGTAAAACACAGGAACAGCAAACTGGGGTACTGAAACCCCCACATGATGACCAGACTGTAGCCATGACATAAGCTGCCACAATTCTGAGACCTGGCCTCAAAGAAATGGGAACAAACTGACTCTGGAACTGAAGATTAACTGTACCTAATCGAATCAAGATGACACTGACCAGACTCTTGCAGCACCAATTTCAAGATGATTGCCAGAGCCGACTGTGCTCTTTCTGCATGAAGCCCCATCCCTCCCTTCCTCCCTCCATAAAAGCTCTTGCCCACTGATTGTCAGTGTGGAGGAGCTGGCCTTTGTCAGGAGCCCCCTGCCCCCAGGCTGTTGTCCTCTGAAATAAAGCAAACTTTCCTT EMBV3_13207 CATTATTCTCCCTAATTTATTTTCATCCTTGGACCTTCAAACCATCTTGGAATAAGTATG Gene BVT0102_058180 - 1 EMBV3_19993 GK000003.2:75148095-75243051 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170287 TCONS_00170279 TCONS_00170282 TCONS_00170291 TCONS_00170283 TCONS_00170284 TCONS_00170286 TCONS_00170289 TCONS_00170290 TCONS_00170285 1 XLOC_103550 Coding TCONS_00170291 XLOC_103550 Coding Coding - 3:75191764-75240819 - TSS127277 4865 1 TCONS_00170291_1 272 0.0826310380267215 10 0.901027439148693 9.77511728000922e-14 1.12107671245654e-06 5.24410469606808e-12 0.000169288665638753 0.000149959061048799 0.000103426756020917 0.000302034601442948 8.73665915905092e-05 0.000994882501786723 0.000239719119615212 2.88717159959519e-05 0.000127652744790643 0.000100174320610231 0.0001178284719037 0.000195459727920032 0.000782510352857858 0.000149506629052798 0.00117930279894721 0.000111000536652771 0.000262096386340856 7.66281415132005e-09 0.000731619982196882 0.000302675647359829 0.000377810242518736 0.000234246733686277 1.95526414971673e-07 4.66142615585066e-05 2.60218908702912e-05 2.79951027153512e-08 2.4715732697669e-05 XM_003585473.2 LOC100851638 PREDICTED: Bos taurus ankyrin repeat domain-containing protein 13C-like (LOC100851638), partial mRNA. 0.0 702 100.00 0.0797533401849949 NM_030816.4 ANKRD13C Homo sapiens ankyrin repeat domain 13C (ANKRD13C), mRNA. 0.0 3934 83.45 0.761562178828366 TCONS_00170291_1 sp|Q8N6S4|AN13C_HUMAN AN13C_HUMAN Ankyrin repeat domain-containing protein 13C; 0.0 559 98.90 0.996323529411765 1 coding 0 0 0 0 0.068807509716549 0.720050465066499 -0.0283744712434912 0.542825617997869 AGGTGACTTTTATCTCGAACTTCACTGGGATTTTCAAAGCTGGGTGCCTTTACTTTCCCGAATTCTGCCTTCTGATGCATGTAAAATATACAAGCAAGGTATCAATATCAGGCTTGACACTACTCTCATAGACTTTACTGACATGAAGTGCCAACGAGGGGATTTAAGCTTCATTTTCAATGGGGATGCGGCACCCTCTGAATCTTTTGTAGTATTAGACAATGAACAAAAAGTTTATCAGCGAATACACCATGAGGAATCAGAGATGGAAACAGAAGAAGAGGTTGACATTTTAATGAGTAGCGATATTTACTCTGCAACCTTATCAACCAAATCAATTTCTTTCACGCGTGCCCAAACTGGATGGCTTTTTCGGGAAGATAAAACAGAAAGGGTAGGAAACTTTTTGGCCGACTTTTATCTGGTGAATGGACTTGTTTTAGAATCAAGAAAAAGAAGAGAACATCTCAGTGAAGAAGACATTCTTCGAAATAAGGCCATTATGGAGAGTTTGAGTAAAGGTGGAAACATAATGGAACAGAATTTTGAGCCGATTCGAAGACAGTCCCTTACCCCTCCTCCTCAGAACACTATTACATGGGAAGAGTATATATCTGCTGAAAATGGAAAAGCTCCTCATCTGGGTAGAGAACTGGTGTGCAAAGAAAGTAAGAAAACGTTTAAAGCCACGATAGCCATGAGCCAGGAATTTCCCTTGGGAATTGAATCATTATTGAATGTTTTGGAAGTAATAGCTCCCTTCAAGCACTTTAATAAGCTTAGAGAATTTGTTCAAATGAAACTTCCTCCAGGCTTTCCTGTAAAATTAGATATACCCGTGTTTCCTACGATCACAGCCACTGTGACTTTTCAGGAGTTTCGATATGATGAATTTGATGGCTCCATCTTCACCATACCTGAAGACTACAAGGAAGACCCAAGCCGTTTTCCTGATCTTTAACTGACACAGAAGATGATGCCATTCAACCAAGGAAGGCTAGAGATTGCAGAGACCCCAGAGTGAATCCAAGTAGAAGGGACAAATGCTTTCATCGAGGAAAAGGGAATTATGTTGACTCGACACATCAGTGATATAATGAAATGGGCCTCTAATAAGAATTTCAGCAAGTTTCCTGATGTGCCATTTTCAGTCTTTTTAAAAATATACATATTATAAGTGTAATAGTTTGACACCTTAATGACCCCACTTCCTTCTTATGTAAAACAGCTATGAGTGCTGTGATTTGTTTTTAAAAATTTTTACACTTCTTGTTGAAATATATATGCATATATCTATATCTATATCTAAAACACTCCTGGACCATTAACATAAATTAAATGTCTTAAGAGATATGAAGCCCTTTTAAACTTGTCATCTTATATTCAAGGTGACCTTTATAAATATTCCTTCAAGCTTTGTTTTCATAAAATGTAAAGTATGTAACATTATGTATAGTTCAGTAATTTGAATGTTCGTTCAATATAATGAACTAGAAGGAATGCAGTTTTCTGTAGATGAATGAACCAAATGGTAACCATTAAACAGTTGCATTTATATGTTGCAATACATTTCAGAAGGAGCGTTCACTCTGCAGGGAATAAGGTACCTCCTTTAGCACCTTAGTGCAATTCATTGTGGTGCTATTTGTTTTTACCTGAATTCTTTCTTCAATGGAAAATGTTTGTTAATAATCTTCCTTTCATAGAACCTCGGTTTTTTTTTTCTAAACTTGAGTTTAAAAGTCCTTTTTTGTGTTCATGATAAGGTACAGTTAGCATGCTTAAAGATACTCTTCTTCCAAATCTGAGCACTTTAAAGAAATTCCAAATATTTAAACTTGCTTCCTAATAAGTGCACATCATTCTGATTATTTCGTTTGTTTTTAGTGGTATATGGATGCATTTGTGTCAGTTTTAAAAACAATCCACATATTTTGGACATCCCTACATATTTAATGCTTTCAAAATAAGGTAAAAACATTTTATATGCTAACAGAATATATTTGTTACAAGTTAAATTCCAGAAACGTACTCAAGACTGACAATTCCTACTGTTATTTTTTTAAGTCACAAGAAAATATTTATTGATTTTAATTACCTACAGTGTTTAAATCATGCATTATTCATTTTTGCACTTAAAATCTTTCATACTTATTCCAAGATGGTTTGAAGGTCCAAGGATGAAAATAAATTAGGGAGAATAATGTATTAACAGTCATAAAATGTTACGTTAAAGAACTTAGCTGAAGAAATGTTTTTAAATGTATCCTGAGAAATGTGTCAGAATGGATGTCAAGTTTTTTAGAGTGATCAGTAATTTAAACTTTTTCCAGGATTTTAAATAATTTGAATGAGTTTAGAAACCTTTATTGAAGAGATGATTTATTTAAAAATCCAAAGCATCAACCGTAAGAAATTTTATAATAAACGTCTTTGAAGCTGCATCTTCCATGCTGATACCTACTACACTGCATATGTTGCCAGTCTACTAAATATATTTTATATGATGAAACATAATCATAGTTAAAAAGATTCAAAGACCAGTTACTACCTTATGTGGGTCTGTTGAATTCTGTGGAAAGAGTGGGTAAAACCATACTAGGTTTATTGAATAGAAGTTGATCCCTATTATTTTGGGAATGTTTTGATCAAGTGACTTAGAGATTCTATTATCCTGTCAATGATTATATGAGGTTTTGAGAGACTGAAAGGCAGTGAATGATCACTGTTGCTCTTAGGCTCCCTTACTTTGTGGCAATATGGTATACTTTCAGGAATATACTGCAGATCTTTTTTGTACTAATCCAGTGGGGGGAAAAATGGTACATTGCAGCTTAGGACTTATCAATTCCCTACAAGCTGTGACTTTTGCCGGGGTACACTGGAGGTAGGAAGACTACTGAAAACTTTTGCACTTGGATTTTAACTTTCTCTCATAAATAATAATAGAAAGAAATTATCCATTCCAAAATGTCTTTTATCTGACCACAAAGGACAGGTATATGTCAGTATCTCTTATGATGGTAAAAATAAGGAGCTATTTAATGCAAATAAACTTTTCACAATATTAGACTTTTCAAAATGTGCCTTTTAATCCAGCTAATGAGTGAAGCTATATGCTGTTTCAAGTAGATAAAAACTTTATATTTTGATACTCTTACATGAAAATCTAAGTTTTATAATGTAGGTTCATAAAATTCTCTATGCCTTCCATTTGTGATTAAAAAACTTGTTTAAAAATTGGACTATAAAATGGTTACCTTAAATGGCTACTTAAAAGGCTCAATATACCCTGCCACCACTATGGTTTCAGAAGAATAGTCTTGTCTTAAAAGAAAATTCCCTAAAGACAATTTGCCTCTCTCTGCAGACTAGACATTCATGTACAGAAAATTATGAAGCTTCATTAAGAGGGAGGCACAAAGCTGATGCTCTGATAATATTTTGAGTATAGCTACACACAATGGTCTGGAAATGGAACACATTTCAGAGAAGCTGAAAAACTATTCAGTTTCTTTCTCCTGCTTAGAACTGGTATTGAGCCCCACTCACACAAAAATGTTTTCGTAGTGTTATTCATGCACAGCTTATCATTCACATCTTGAGGGAAGGGTGGTCAATAACAAGTGTTTTACTAAAGCTTCTCCCTAGTTTCCACTTAGCCTACAGCAGAGCTTGTTTCGAGGCCACAAAGGACTAAAGAAAAATTAAATTAAGGGGTGCTTCCTTTTGTTCATTCATATTATTTTTTTATTTGCCAACATGGTTTCCCTGGTGGCTCAGATGGTCAAGAATCTGCCTGCAATGCAGAAGACCTGGTCAAAAGATCCTCTGGAAAAGGGAATGACTACCCATTGCAGTACTCTTGCCTGAATTCCATGGACAGGAACCTGGTGGGCTACAGTCCATGGGGAGGAAGAGTCAAACACAACTGAGTGACCAACACACAACATGGTTGACAAACAGTTCTAAAAATCTAGGTGAATTAGAAGTCCTGTTTGTAGTATGCTAACCTTTACTGTTGAGTTGGGAGAATTACTGATTAGTATAAACACAATATGCCTCTACTGTTAGCTCCAGCAAAAGCTATCTTAATGATATTTTCCAAAATGACCAAAATGTATCTTTTCCAAAATACCTAAATTTGGGAACTTTAAAAGACAACTGACAGTGAAACTTTGATATGTGACTTAACTACCTGTGATGATCTTTAATTGGAGGATAATTACTTCCCAATAATGTGATGGTTAATGCCATGAGGCAATACCTGTGATGATTTTTAAAAATTGTTATAGCCCATTTTAGAATAGTGCTTCTGGCTATGGCACATATGGTACATAAACTTTTAGCTGTTTTAGTTCATCCTTGTGGGTTCCAGCTTGTGGTTTCAATTTAACCTCAACCCCTCCAACCAGCCTGGTGTTCTTGACTCCTGTGGACTTGAGTCTCCAGCATCAGATGCATAGTATAGACAATTTTGAGACCATTAAACCAGCTCCCACAATTAAGGTCAAATCTCTAACAAACCTTTGAGTCATTCTGCTTCCTGGACTGAATGCTGACTGAAAAGAAGAGCAAAACTATACGATGCTAACCTGACGCTTGTCTTCCAAAACCTGGTATTTAACACCTACTGTAAATTTTAAGTATATTCTTACGGATATCCCCACTGGTAAAGAATTAGCATGGTTCACACCTGAGTTATTTTGCTAAAGACTGTCTGAATGAATTTTAGGTATTCTTTGATACTAAAATAGGAACAAAAATAGAATACTCAGAATCAACAACTCAATAGTTTCAGACATATTCTGAAAGTACCAATAGTATCTCCATTACATCCATATTTAATAGTCTCATTTAAAAAC TCONS_00173715 TCONS_00173719 TCONS_00173716 TCONS_00173717 TCONS_00173718 r 3' 883 TCONS_00170288 s 3' 43671 EMBV3_37127 TTTAAGAGAAAGGCAGATTGCACCATCAAGGGTTTTACGGGAGGTGTGGAAGGATTAGCC Gene GeneID:282331|PTGER4:NM_174589:62_cdna UTR3_Alt 2 NULL GeneID:282331 20 GENE PTGER4 ep4 prostaglandin E receptor 4 (subtype EP4) EMBV3_31367 GTACTGCGGAAAGCCGGAAAGCCGGGTTCAGTTCGCACTCTGCGTTTCCGCTAACCTACA Gene BVV0102_394295 + 0 NULL GK000018.2:34392931-34414472 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089718 1 XLOC_054501 NonCoding TCONS_00089718 XLOC_054501 NonCoding NonCoding - 18:34394289-34394560 - TSS67064 271 1 0 5.02055685741809e-05 0 3.41475794306586e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000237825805593715 0 0 0 XM_005195250.1 LOC525286 PREDICTED: Bos taurus chemokine-like factor superfamily 1-like (LOC525286), transcript variant X4, mRNA. 4e-30 134 100.00 0.269372693726937 0 noncoding 0 0 0 0 0.571091025018947 0.0320932283264629 0.0432156351872241 0.436258406443015 GAGAAGTTGGCCTTCGTAGCTCCCCTGTAGGTTAGCGGAAACGCAGAGTGCGAACTGAACCCGGCTTTCCGGCTTTCCGCAGAACGGGAGCCTGTGGCAGGGAGTGGGGGACCTGGCGTGCACCCAAGTGTCGCTGCAGTAACTTGTGCATGCACGCGCCAGGGCGGGAAGCCTAGAAGCGCTGCACGTGGCCGGGGTGGCCGTTGCAGACTTGGCGCAGGGCCTGGCAGAGAGGTGCGCTGAATAGGGGGACCCGCGGGAAAGTGCTGCT TCONS_00085983 . 5' 499 TCONS_00085983 . 5' 499 EMBV3_04507 GACCTGCCCAACAACAGAGAGCTGTACATACACAGAATTGGGCGATCAGGTCGATATGGC Gene GeneID:515145|EIF4A3:NM_001046188:404_cdna Constitutive 0 NULL GeneID:515145 19 GENE EIF4A3 MGC134221 eukaryotic translation initiation factor 4A, isoform 3 EMBV3_12747 GGCCCCATCTCCAAATACAGTCACCTTCTGAGGTTAGAACTTCCCTACATGAATCTGGGG Gene GeneID:515553|SLC25A34:NM_001034497:133_cdna Constitutive 0 NULL GeneID:515553 16 GENE SLC25A34 MGC127606 solute carrier family 25, member 34 EMBV3_36330 GGTGCCTTATCATAATAGCACTGTTGCATGAAATAAGCCCCTACCTTCTCACTTTCTAGT Gene GeneID:782597|PLEKHF2:NM_001098150:100_cdna Constitutive 1 NULL GeneID:782597 14 GENE PLEKHF2 NULL pleckstrin homology domain containing, family F (with FYVE domain) member 2 EMBV3_04031 AAGCAGAGCGGCTGCACAAGCGGGTGACTGAGCTTGAATGTGTTAGTAGCCAAGCAAATG Gene GeneID:535311|HOMER1:NM_001076052:218_cdna UTR3_Alt 2 NULL GeneID:535311 10 GENE HOMER1 NULL homer homolog 1 (Drosophila) EMBV3_18795 CCAAGTGCATGGGAGAAGTAACAGTTTTGGTGGTCTTTGCTGTTTATGGGTAGATTACTC Gene BVV0102_054178 + 0 NULL GK000006.2:68391573-68404659 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203433 TCONS_00203434 TCONS_00203435 TCONS_00203430 1 XLOC_124175 Coding TCONS_00203430 XLOC_124175 Coding Coding NIPAL1 6:68364395-68395387 = TSS152385 5157 1 TCONS_00203430_2 412 0.0748497188287764 6 0.833790455293472 6.99574650793009e-06 4.74328842063424e-13 3.37128586225362e-11 5.48205661505815e-14 8.72273055352898e-11 2.77361118177436e-09 0 3.37739343720607e-14 6.63576397200093e-115 8.48178380462475e-17 4.43257379856965e-12 1.70457623081173e-10 4.01558018030067e-22 2.63371165059096e-14 2.63230172012811e-10 0.00186313094245437 0.00120815888572133 0.00153332692587543 5.87742621067493e-09 4.14780321784698e-186 0 5.85520265152082e-09 0.000672437116558136 0.00137018114884088 0 8.87176992138888e-09 1.76713804269501e-57 5.53166960605568e-05 1.27340739106655e-09 8.10453650263158e-06 NM_001192302.1 NIPAL1 Bos taurus NIPA-like domain containing 1 (NIPAL1), mRNA. 0.0 2356 100.00 0.253054101221641 NM_207330.1 NIPAL1 Homo sapiens NIPA-like domain containing 1 (NIPAL1), mRNA. 0.0 1786 83.31 0.325964708163661 TCONS_00203430_2 sp|Q8BMW7|NIPA3_MOUSE NIPA3_MOUSE Magnesium transporter NIPA3; 0.0 671 82.97 0.995145631067961 3 coding 0 0 0 0 -0.0744792106512958 0.598281781853151 0.0366761021502199 0.444051879155983 CCGAGACCCTTCAGCTCCGCCCCAACGCGGTTACATGGGGAGCCGGAGAAGACCGGTTGCTTGAGGAGCGAGCTTCTGCGCCTGGGAAGCCCCGTCGCGGGTCATGGGGGGACAGGTGAGGCTGCCGCCCGGAGAGCCCTGCCGAGAAGGCTATGTGCTGTCCCTGAGCTGTCCGAATACCTCCCAGGCTTGGTGTGAGATCACACGTGTGTCACAGCTGCTGGCTTCTCCTGTCCTCTACAGGGACCTGAATTCCAGCATAACCAACCTGAGTGTTTCTACAAATACAGAGAACAAATACAACCTTTATATAGGCCTGGTACTGGCAATAAGTTCCAGTATTTTTATTGGCTCCAGTTTCATCTTGAAAAAAAAGGGCCTTTTGCAACTGGCCAAAAAGGGTGTCACTAGAGCTGGACAAGGTGGACATTCTTACCTCAAGGAATGGCTCTGGTGGGCAGGATTACTCTCAATGGGAGCAGGAGAGGCTGTGAATTTTGCAGCTTATGCTTTCGCTCCTGCCACTCTGGTCACCTCACTGGGCGCTCTGAGTGTTCTTGTCAGTGCAATATTGTCTTCCTACTTTTTAAATGAGCGATTGAACATTCATGGGAAAATAGGCTGCATATTAAGTATATTGGGATCAACTGTGATGGTTATCCATGCCCCACAAGAAGAGAAAGTTGCTACTCTGCATGAAATGGAAATGAAATTGAGAGACCCAGGATTTATCTGCTTTGCTGTGATCATAACTGTGATCTCCTTGGTACTAATTTTGATTGTGGCGCCCAAGAAAGGACAGACCAATATATTGGTCTACATATCAATCTGTTCACTGATTGGAGCATTTTCAGTTTCCTCTGTCAAGGGCCTGGGAATTGCCATTAAGGAACTACTGGAATGGAAGCCCGTTTATAAGCATCCCCTGGTCTTTGTTTTGTTGGCTGTACTTGTGCTTTCAGTGGCAACACAGATCAACTATCTCAACAAGGCACTGGACACCTTTAATACATCTCTTGTGACTCCCATTTATTACGTGTTGTTCACATCCATGGTAGTGACTTGCTCTGCCATCTTATTCCAAGAATGGTATGGCATGAATGCTGGAGATGTCATCGGGACTTTGAGTGGATTCTTCACCATCATCAATGGCATCTTCCTTCTACATGCTTTTAAAAACATTGACATTACCTGGAGTGACCTGACATCCACTACTCAGAAAGAAGTCCTCTCTGCGAATGGCAGTGAAGACAAATATGTCTTACTAGAGAACACAGACTGTTCAGTGCCAGGATTCGATGATGACATTACCTTGTATAGCAGGACTGGTCAAAATCCCTAGAAACATGGACTTTAACCACCAGGAGACACTTGGAGAGGAGAAGGAATACCTGATTCTTGAAAGAAATATTAGGAAAGCTGGCATTTTTAAAGTTCTAACTAATAATGTACACATGAGGCCAAATAAGCCATCAAGTTTGAAAAATCAAAATTTTGATCCAGAAGACTTTTGCTGTTTTTCATTTCTGCAAACTTGAAACACTCCCTAAGCATGAAAGAAGTCAAAGAATTAGATAACTCTCAGAATAATCTCTTTCTTTTGGTCACAGTGTGTGTGACCTGCCAGGTGGCTCGTCATTTCTTTGGCTGCTATTCTTAGTTTCTCAGTAATTCACAGGTAAACTCAACTGTGTACTGATAAGCAGAATATCAGTCTTCACTCTAATGAGTCATAGTTTCAAATTATTAAGACTGAGAAGCGAGATCACTGATGCTTCCCCTCGCTCTACAACTTCCTTCTTTCTAAACTAAATAGCTAAAAGGAAGAGTGTTAAAGAACACACACATGTTGGAAATCTTCTCGGTGGTATGCTAGACTGTGCAAGACACATGTGCCCATGAAGGGCTTATAAGTTGTAATTTATTAGTATATCATAGAGGTTTATTAACAATTAAAATGGGAGAATGGAAGAGAGAAATACTTAATACCTTAGGTAAATGAAACTATTTTTCCTTTTCACAAAAACAAATGCACATGATTATGTTCATGGGTTAATTCAGACCTGAACAACACAGGACACAACTGAGTTTCTGAAGAAGCACAAGTGATTTTGGCTTTGGAGTTCTTTCTATTCATTTTGTTCTTTACTTTTATTATTATTATCCCAAGTGTCATTTTTATTTTTGATGTAGACTTTCAAAGAGTAATTGCTGCATTGTTTTAGCATTATATTGTACACTTCAATTTTTCTCAAAGGTTTAATCCCCAAAGGGTGGGTTTTCCACAAACTAGAAACAAATAGAAAAATCTTTATGAAAGACCTGAATGAGTTATCATAATTGTCCTCTTGAAATCTGGCACTTTCACCTTTATTAAGGAAATTATAATTGGTTACTAACCTTTTAAAAAATATACATATCCTACCACAATAAGTGGTAGATTGTCTTTTTCTGTTGAATTTCATCCTGGCCATGCTTTCCATCCATTTTATTGTAATTATCTGGGGAAAATAGGAAGGTGGGTTAACTTCTTAGAAAACAAAATACTAAGACCCCGGGGTAAAATACTAAGACCTTAGTACAGGGAAATATATTTTCATGTTAAAGCATGCATAAAATTTTCCTATCTCACTCCAAGTGCATGGGAGAAGTAACAGTTTTGGTGGTCTTTACTGTTTATGGGTAGATTACTCATCACTCATTGATTTAATGGAAAAGAAACTAGCTATATTATTTCTAGACCAAAGTTATTTCTCTCAAAAAAATCCTAAGCCCAAAATTATGACATGAAAAAAAAAAAAAAAAACCCTTCAGTTTGACTGGATTTTTCTTCTCTAATGTCAAATGTTATTTTGTTTGTAATCTAGCTCAAGTCTATCCTGGGTAATAGTAGTAGATTCTTTCCTTCAGAATTCCATTAAAGTGACTTGAGCATTTCCACAGTTTCGTTGAACTATGACTGACGTCCACAGTGATGACCTGAGATGATTGCAAAATTCTAAAGTGCTGGTATAGTCTCTTTGGCATAGGGCTTCCCAGATGGCGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCACGGACGGAGGGCCTGGTGGGCTGTAGTCCATGGGGTCGCTAAAAGTCCGACACGACTGAGTGACTTCACTTCACTTTCCCAGATGGCGCTAGTGGTAAAGAACCAGCCTGCTAATGCAGAAGACATGAGAAACACGGGTTCAATCCCTGGATTAGGAAGATCTCCTGGAGAAGGGCATGACAACCCACTCCAGTGTCCTTGCCTGGAGAATCCTATGGACAGAAGGGACTGGCAGTCTACAGTCCATGGGGTTGCAAAGAGCTGGACACAACTGAAGTGACTTAGCACACAGGCAGTGTTGAGTGCAATTCAGTGCCTTCCAAATTTTTGAAAATTGATAATCCATGGAAGATTCATGGGTTGATACCTCAGGTCAAATATATGTTTACTCTGTTGATTGCTGTTTCATCTAAATTGTATATCAGATACGTAAATTATGAATATAAGCTTGTGTTCATAGAAAACATGGTTTCTAAAAAGGTAGGTGTTAAAAGTTGTAGAAACTCATTTAAAGTTTTTCTTTTTTTATGTTGAAAACTGTTGCTTTCTCCAGGACACCTTCTTAGTGAGCAAATTCATAGCGTCCAACCTGACTCCAAGGTAGTCCTCCTTTTAACTGAATCTTGGTTTCAGGTATTTCCTCAAGGGCACCTGTTACAAAGCTTTGCCCTTGGTATATTGTGCCCAGCTTGAAGGTTCCTGGAATACAAGAAACCATGTGTACCCTGGGATGGATAATGAACTGGTGTTGACACATATGCCCAGGAGAAAGTCTCAGAAAAATCTAATAAGTTGAAATATATTGAGAAACAATGAAACATTTGAAAAACTCTAAAAATCTCTGGCGGGCATATGCATTGAAAAACCAAAATTTTGCAAATCCAAAACCCAGAATACTTTTTCCCAAATAGGAAGATGTTGTCTAAGAAGGAATACAATGCTGGATCCCTATATTCAGACTAACTGTGTTAGTCTAACTGGTACTTTCAAATGTATATATTTTAATATACATACACTTTATCTCAGATACCTTAAGATTTATTATGTGAAAAGCCTTTTGTAATTCTGTAAACATAATAGTTTCATTTTATTTTCTAACTTACAATTTTATTCCTAGATCAATGGTTAATTAATTTTTAGTTCAGATTTCCAAATGTTCATAAAGCCTCTAGATTTGGCAGCATGCAATTAACATTTTTAAGAGTATGAAATCAAATATGTGTGTATGGAAAGCACTCACATTTATCCCTGACATTGAGGCATTCAATACAATTCAGTTCTCTTGGAAACATTTTAATTCTCATAGTCTTAATATTGGACTGATAAGGACCATTAGTCATCAGTTTTCATAAATTCTTTTTTGTTCTCAGTTTGTCACTTTAGTTCATTTTTAATAATTCAAGTGAAAATGAATTCTATTAGTGTATTATCAACAATACAAAATGTCAGACAAAAATATTTTTCTTAATAAAACCAAACTAAATACACTTTTCACATCCCAATAAAGCTTTGTAGAAAATAACTTATATCAATATATATGAAATATTTTCAAATATTTAAAAAATTATGATTATGAAATTTTCTATTTTTCTAATGTTTATAAATACTGTGCATTTTAGAAAGTTTACAACTTTTGATGTTTCTCTATATCTTTCATTTGTAATAAAATAATGTGGCTTACTTATCCTTGTTGAAGTTCTGTTTTGAGTTTCTTGAAGTTAAGTTTATGCCATGGCAAAATTAAAAAGAAAAGTTCGAGGTTTAAAATGCTTTGTGCTTAATGCTTTGTCATTTTCCTTGAAATTAAAGTCTATGTTTTAGAGAAAGGCTCTGCACAAAACCATCTCCTGTATAACTAACTGATCTGGCACCTGAACAAAAAGTAGAAGAAACTGTCTTATCTTTTGATAATTTTGTTGAACAGTCAGTGTAATGGTATCACCTCTCAGTTCAGAAATTTAAAAGAAAAACAAGAAAGAGAAAAAAATATATAACAATATTTGGTAGCACTGCATTACATTAAAATTTATATTCTCAAACCCTCTTTCTGGCCCCAGGGGAACTTGACCAC EMBV3_15333 CACCACTGCTGCCCTGCTCTCAGCTTGCAAGAGAAGCTGGAGATTCAGTTACTCCACCAC Variant GeneID:515476|ORC6L:NM_001046201:249_cdna 474^586 2 EMBV3_24157 GeneID:515476 18 GENE ORC6L MGC128736 origin recognition complex, subunit 6 like (yeast) EMBV3_14665 GGATCTCAGCAGAGGCTGTATTCTGCTCAGCCTATGGGCTCTTTCAGTGTTTGGGAGTTA Gene GeneID:530527|C22H3ORF37:NM_001075934:35_cdna Constitutive 1 NULL GeneID:530527 22 GENE C22H3ORF37 MGC142929 chromosome 3 open reading frame 37 ortholog EMBV3_34029 TTTGTGGATGAATATGATCCTACGATAGAGAGAACAAATAAAAAGAGTTAAAGACTCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13711 TTCACGATCCGGCTGGTAACTATGCTGTTCAAATCTTCCACGACTTCGCCCGTTTCCACT Gene GeneID:100337399|LOC100337399:XM_002696465:90_cdna Constitutive 0 NULL GeneID:100337399 20 GENE LOC100337399 NULL Sodium-dependent dopamine transporter-like EMBV3_15147 CAAAGACTTCTGCAAAAAGTGTGAGGATGCGCTGAGGAAGAACAAAGCCCTGATTGGGCC Gene GeneID:508023|DOCK6:XM_002688870:241_cdna Constitutive 0 NULL GeneID:508023 7 GENE DOCK6 NULL dedicator of cytokinesis 6 EMBV3_05200 ACTTGTGTGCCTGCACGTACCGTGTGTCATTGAAGTTACCTGGAGTGAGGATTACTGTAA Gene GeneID:525161|DCAF12:NM_001167896:37_cdna Constitutive 2 NULL GeneID:525161 8 GENE DCAF12 WDR40A DDB1 and CUL4 associated factor 12 EMBV3_20278 CAGAGCTGCACCCCTTGCCCCAACTCAAAGATCAGTGCTAACATCTTCCGAACTCTTCCT Variant GeneID:533788|PPP2R5A:NM_001081728:87_cdna 689^885 3 EMBV3_35559 GeneID:533788 16 GENE PPP2R5A MGC138101 protein phosphatase 2, regulatory subunit B', alpha isoform EMBV3_40632 GGATTCCAAACAAGTTTCAAAGCGACCCACCAGCTCCCAGCGATGACAGCATTAAGATCG Gene GeneID:613416|LOC613416:XM_002687812:96_cdna Constitutive 0 NULL GeneID:613416 5 GENE LOC613416 NULL similar to heme binding protein 1 EMBV3_16252 ACTGATTACACCTTCCCACTTGCTGAAAAGCCAAGGTTGAAGCAAAGGAGGAGTCGGAGG Variant GeneID:286868|RPLP0:NM_001012682:27_cdna 853^949 11 EMBV3_31064 GeneID:286868 17 GENE RPLP0 ARBP ribosomal protein, large, P0 EMBV3_16885 GAAGATGGCACAGGTGGAGGCCGCTTTGCAGCCAGAGACCCTGAAGAAATGGGATAAACT Gene GeneID:538280|SERPINA11:NM_001099083:277_cdna Constitutive 1 NULL GeneID:538280 21 GENE SERPINA11 MGC159632 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 EMBV3_12809 GAAAATTCAGAAGATCGACGAGCCAGGGTGTCAAGGTGATTCTGGACAGTTACTTCTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30843 AACTATTTTTCCTTATTAATAGCTGCCTTCCAGGACTGTTTCAGTGAGAGACAGAATGTG Gene GeneID:407101|TJP2:NM_001102482:20_cdna Constitutive 0 NULL GeneID:407101 8 GENE TJP2 MGC159949 zo2 tight junction protein 2 (zona occludens 2) EMBV3_36118 TCTGGAACCCCACCTACGGCTCCTGGTTTACAGAGAAACCCACCAAAAAGAACACTCCAC Gene GeneID:536642|ALK:XM_002691492:396_cdna Constitutive 0 NULL GeneID:536642 11 GENE ALK NULL anaplastic lymphoma receptor tyrosine kinase EMBV3_23627 GAGAGGCCGGATAGCACAAATTCAGAAGGACAGAGGGTCACACAGCCTACTAGAGAGACT Gene BVV0102_096096 + 0 NULL GK000015.2:47085799-47108928 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00059331 TCONS_00059332 1 XLOC_036325 Coding TCONS_00059332 XLOC_036325 Coding Coding RRP8 15:47082233-47096167 = TSS44518 12031 1 TCONS_00059332_2 457 0.397390075637935 7 0.137012847197301 0.000824780239873557 0.000504366508283491 0.000714953758867038 0.000355663192199944 0.000527737788765684 0.000154104390437544 0.000497015207284997 0.000315839531482732 0.000549566365480612 0.000113228805562349 0.000118586226402524 0.000240142236893922 3.74819745139775e-10 0.000114625793357559 0.000152120747314146 0.00398555310296406 0.00117158330032503 0.00189467884844511 0.000467890542429247 0.000619590032001105 8.45280277966651e-05 0.000885718234793172 0.00110796576736222 0.00121230143077467 0.000645566706543478 0.00066020770619949 0.000442479451741653 0.000385008570210001 0.000269866197556606 0.000752564103815789 XR_237533.1 RRP8 PREDICTED: Bos taurus ribosomal RNA processing 8, methyltransferase, homolog (yeast) (RRP8), transcript variant X1, 0.0 1.985e+04 100.00 0.914803424486743 NM_015324.3 RRP8 Homo sapiens ribosomal RNA processing 8, methyltransferase, homolog (yeast) (RRP8), mRNA. 0.0 1721 82.42 0.140969162995595 TCONS_00059332_2 sp|Q9DB85|RRP8_MOUSE RRP8_MOUSE Ribosomal RNA-processing protein 8; 0.0 675 74.78 0.99781181619256 2 coding 0 0 0 0 -0.116316917037464 0.554155538858612 0.0398542510071943 0.432687018607209 CTGTTCCGGCGTCTCTGAGAGGTCTGATTGCTAGAGACGCTGTCTGCACGTGGAGAAGCGCGTGGATCCCGCAACCTTGCGCTCCCCAGCCCCATGTTCGAGGAGCCGGAGTGGGCCGAGGAGGCCCCTGTAGTCGCGGACCTCGGGTCTGTAGCCTTAGGGCTTCGGCCCACGGCAGTCTCTCAAATCAAGGGCTCCAACCGCCGCCAGCTCTTGGCCACATTACGGGCCCTGGAGGTAGCATCTCTTCCCCAGCAGTCCCCTAGCCTTCCTGGCAGTGACTCTGAGGAGGAGGAGGAGGAGGTCGTGGAAACAAAGAAGAAACGCCCAAAAAAGGGCTTGTTTGCTGGTGCGTCTAATGAAGTAGAGGAGAAAAGGAAGAAGAAACGTCACAAACGGGGCCCACCTAGCAGTGACTCCAAGGAAGAGGAAGTGGAAAGGGAGAAGTGCCACAAAGGGGCTCTTCTTGGCAGTGACTTGGCTGAAGAAGAGAAAAAAAAGAGGAAATGCCAGAAACAGATCCCTTCAAATCTTGCCCAGCCCCTGGACAGTGTTGACCAAACAGGTTCTAAAGCTTGGAATTCTAGTGCTACAAGTGATCCCACCAAGCCAACCTGTGAGACCCCTTCCTCTAATCCTCCCCATACCTTGAGTCGCAAGCAATGGCGGAACCGGCAGAAGAACAAGCGTAGACAGAAGAACAAGTTTCGGCCATCTCAGCCACCAGAGCAGGCCCCAGCCTCTGCAGAGGAGGCAGAGGTGCCTTCTGCCCCCAGTCCAGACAACCATGGAGCCCGGGCAGAGGCTCTTCGAGCTCGCATGGCCCAGCGTCTGGACGGTGCCCGGTTCCGCTACCTCAATGAACAGCTGTACTCAGGGCCCAGCAGTGCTGCGCAGCGCCTCTTCCAGGAAGACCCTGAGGCCTTTCTCCTCTACCACCGTGGCTTCCAGAACCAAGTCAAGAAGTGGCCACTGCAGCCAGTAGACCGCATCGCCAGGGATCTTCGCCAGCGGCCTGCGTCCCTGGTGGTAGCTGACTTTGGCTGTGGGGACTGCCGCCTGGCTTCAAGTATCCGGAACCCTGTACACTGCTTTGACTTGGCCTCTCTGGACCCCCGGGTCACTGTGTGTGACATGGCCCAGGTGCCTCTGGAGGATGAATCTATAGATGTGGCTGTGTTCTGCCTTTCACTGATGGGAACCAACATCAGAGACTTCCTGGAGGAGGCAAATCGAGTGCTGAAGCCAGGGGGTCTCCTGAAAGTGGCTGAGGTCAGCAGCCGCTTTGAAGATGTTCGGACTTTTCTGGGGGCTGTCACCAAACTGGGCTTCAAGGTCATCTCCAAGGATCTGACCAACAGCCACTTCTTCTTGTTTGATTTTGAAAAGACCGGGCCCCCTCGGGTAGGGCCCACGACTCAGCTCTCAGGCCTGAAGCTTCAGCCTTGTCTCTACAAGCGCAGGTGACCTTTGGAGCCCCCCTTGAATGAGGAGGCAAATCTTGAACTCCAAACTCAGTACTCTGAAGACTGTATCCAGCCAGACTGTGACCTGGGGCCTGGTACCACCCTTACTCCATCTCAAGAAGAAAATGTAATGAAACTCTTGGCTCAACCCTGATGTAAAGACGGCTTCTTGGTTCTAGGAAGCATAAAGTCGTTAGGGCTAGCTACAGAGTAAGGAGTTCATTGTGAGAACACAGGAGTATGTGGGAATTACGGATCCCCTCAGTGTCATGGAAACTACATGGTTTGGAATTCAAGGCATCTCTGGGTTTGGTGTCTGTTTCCATCTCTCAGAAGCCATATGAGCTTTCTGTCTGAGCATCTCCACTCTCTGTTCTAATTTTCCTGTTGGTACATCAGATCCCTCTGCTCACCCAAAGCTTCTACAAAGCTTTAGTCTGCTCGGGCCTTTAAGGCCGCAGGCAGGCATTGCTTCTTGGCTCTAGGGCAGCTTAGCTCTAGAGCAAGTGCAGCAGCCCTCACATCAGCAGAGGCAACTTGGCTGTTGTCCACCAACATCATCTGGACGTCTCGGTCAAGATGGTTTGATTGTCCCTGTACTGAGTACTTTTTCCCCCTGATTGTCATCTCCATCTTCGGAGCTGAATGGCCCTAACCTTCCTAGCATCTGTTGTTCTGTTGGGCCCTGGTGTTTGTCTGGCTGAGAGCACAGATATTGGAATCAGGTTGGCCTGTCATTGACTGCTGAGAGCCTTTTACTCTTGGAATGTCTTGCTACTCACTTGGTAAATGATAGAATTACTGACTCAGGATTGTTGTATGGGTTAATGAGGAAATCTGTAGCCAAGGCTGGGCACGTAGGAGATGCTCAGTAACTGTTGCTGTGGCTGTTGTGTGTTGCAAACCTTACTGTTTCTAAAGACCTTCCCTAAGCAGGATTAGGGGTTGAAGAGTAAAGGATGAATTTGTTGATTGAGGAAGACTCTGGGAAAGCTCAAGATAAGCCTTTCAACAGCCTTATTTTATAAGATTTTTAGAGATTCTTAATAGATTGTGAGCAGTTCTTTGAGTGGGGGTGATGTGGGAGCTGGGTCTCTATAAATCACAACTGATTGATGCCATTTGGGGTGGGGATTGGCAGAAGAATGTGTCTGTTGTTTCTGCCTTGCAGTGGGCCTAGATCAGCATATACTAGGCCAAACTATGGGCAGAGAAGACTAGTTCTGGGAGAAGATGACTGGGATGACAAGTCCTTGGCCTCTTCCAAAAGACATCTGCCGTGGGCCCAGGTATAAAGATACAGTCTGTTCTACCTATTTCTAAGGGCTCCCCTACTGGCTCAGACGGTAAAGACTTATTTCCAAGAACAAGACCTGAGAGGAACCACTGGCACACAGGTTCCAGGACTCTGCACCAGTTGAGTGCCTCCAGTAAGGGGGTGTTTTGAGGCAGGTTGTGCAGGCCAGAGGGCATGTTTGGAGGCTGGGCTGTGAACCATCCAGCAGACACTGTTCAGTACCTCTGCACGTGCTTCTTGCTGCCGATGCTTCTCGCTGCCGAATACTCATCTGACTAGCAGAGTCTTACTCATCCTTCCAGACAGCCTAGTTGTTTCCTACTCCATTACTCCCAAAGCAGAACTAATTTCTCCGTCTGCATTCTCAAAGCACTACAGGAAGAGGTCAACTGCAACATTTAAATACTGTGTGGTGATTGTTTTGTGCATTAGGCTGCAGTCTTCTCAGCTCATATTTATCTTTGTATTTCCAGAGCTGGTCACTTGAGATCCATCTAAGGAGGTGATAAAGATGACAGGGTTTGTGGAGCAGTGAGAAGCAGGGGTGTTGCAGGAACCCAGGTTTGGCCAGATGATGAGGTCACTAGTGACGGTGCAAGGAGTGGGCAGGTGGAAGAACTTCAGCTAGGAGGACTGGTGGGGCATTGAGGCTTGGTGAGAGGAATTCTGAAGCAGATCTTGGGTTTCTGGCTTAAGCGACTGGTTGTGCTGGTGACGCCATTCAAAATGTTGGGATTTTGGTACCTAGATGATGATTTGGAAGCGGGACATAAACTCAGCAGCCAGGGGAGGTAATTCAAGTCATCGTAATAGATAAGATATCCAGAGTAAGATAACGAGAAGAGAAAATGGCTTGGAAGAGAACTCTGAGGAGCATTTAATGGATAAGTAAAGGAAAACGAACCAGTAAGGGTGACAAGAGAAGGTGGGGCCAGAGATGGAGTAAAACCAGGAAGAGTGGGTTTCTTAATGTGGAAGGAATGGGAAGGTTTTAGGCTGTTGGATGCTCTTGAAAGGTCTGTTAAAATAAGAGAAAGGTCAGATTGTGGCAGGGAGAGGATTTCTGCTTAATGTTGAGGGTTTGAATTTATAGTGGTATTATTCATGAATGTATAGTTACACCAGTTGGCCCAATGTTGTGGTTATCTCTGCCTGCTCAGGAATCTAGGTGTAACTGTAGGAAAAATGAGTACTAAGGGATCATCCAGAGTTGAAACCTTACCACACAATTGAAATGAAATTGAGCAAAGGAGTTTCAGACCATTCACAAATTAGTAATGTCTATGCTGGGCCATGGAACTTTGTAGAACAACTGAGTGGAGTGAAGACAGGAGTAGGTAGTTTCACTGAGGGTAATTAAAAAAGTAACCTGGGAAGATGGGAGGCTGTGGTCAGAAACTGGAATGTCTAAATAGTTCATACTGGAAGCAGAGCAGACCCAGGCAGTGGCCAAGTTTAAGAGTGTAGTTATAGGAGTGAGTGCCTGAGAGGAGTGCATGGGAGGTTGCCTGGAGATTGATTATTGCATGGGGGGCTCAGCTATTGGGAGTGGGTCTGCATGGACTTTGAAGTTCTCCAAGATGATGACAGAAGTTAGCATGGAACAGTGCCAGTGTCTTGAACAAGGGGACAGATTCAGGAAATCTGCAGACATAGTAGGAGAGGCCGGATAGCACAAATTCAGAAGGACAGAGGGTCACACAGCCTACTAGAGAGACTTCTGTTTGGGGGATGATGTGAGGCTGGTGAGTGCCAGGCAGCCAAGACAATACCCTGACAGTTGTCTCCAACTTACCGGGATCCCCTGGGGATTATAGGGGCAACTGTTGCGGCAGCTTCGTGGGGTGGGAACCTCTTGGGATCATGGGGAGGCAAGCTGTAAAGTCTAAGGACATCTGCCTCATTATAGAACATACATCACCTTTTTACAGTGTCATAGCCCTGTTTCCTCCCAGGTGTTACGTATATTCCTAGATCTTGATTAGTTTTTCCTGTTTTGTTATCATGCTCAACAGGACAGCTGGGGTCTGCCTTCCTCCCTCTCTTGCTTTCCTTCCCTTACTTAAAATTTGGATTCTTTCTTTGCCTGTTCTGGCTCAAGCCACCTGAATAAACATCTTTCTGGGTCTGACTCAGGCCCCCGACTCCCCCTATCTCAGGCCAGCCTCCACCTGCTTTTCCATCAATTCTGAAAGCAGGACTTCTGAGTCTGGGTCATCGCTGCTCCGTTATCAGCTTCAGGACCATCTCTCGTTCAAGCCTGGGCTTCAGTGTCTGATACTGAGAGCCTAGACTGAAGAAAGAACAGTGTATACTCCCTTAAGAAGCAGCAGCATACCAGCTGTTTAAGGAACAATGAGATCAATTTAAGGTACAATTTGAGAATAGGATGAAGGAGTGGCAGTCATAGTAAGAGGTAAATGAGAGTGGGAAAGAGTCTAACTGGAGACTCCACTGGGAGCATTCAGGAAGCTTGAGGTCTTTATTCCTAAAGCCAAGAAATGGTACACCTGGAGTCTGATTCCTGGCCTGGAAATGCAGAGGGCAAGCAGAGGCTCACTTTCAGTGGTGGAGCCCGGGGCGTGCTGCTGCTTTTGCATTGGTGTGTGTTCTAGAATTTGCTGAGGTGAACAATGCAGGAGTGTATCCTGTGCACTTTGTAGCAGGGGAAGCATCAGGTGGTCTAGAGTGCTGTCCAGTAGGACCATTGAAGAGGTAAGGAAGCACAGAGAAGTTAGGAGTGTGCCATCTGGACTAAGGAGGGAATTGTAGGATACCACCCAGAATAAAGCTGCACCCACCAGGGTAAAGGGGACTGTAGAAAAAGGACAGCAAGATGGCCCCTTTAAATCTGTGAGGCCCATGGGGCCCAGAAATATCCAACTGGGCAAAAGCTGTCTTATCCCCTTCCTTCTCTGCAGTTGGGCCCAGAGCAGTCAGCAGCTATTAGGCACAGAGGAGATGGGAAGAGCAGAGAGCCTAGAGATCACCCCCCTGCCCTTCTCCAGTGCAGGCTTCTTGAATTTAGTGGGACAGAGCTGAGAGGTGAAAACAGCTAAAGCCAGAAGAGGTACAGATTATTTATTGTTACATAGGATTAGATGTTGTAATCACTTGAGATTGGGTTTGTATCTTATACTGATCCTAAGAATCTGGAACTGAGAATGAGCCGTAAGTCACAGGCTTGCCACAGCTTTTCTCTGAATGAAAAAAGGTTGGAGGGGTGGTGGGAGACAAGAATACAGTTGGGTTTGGATAGCAGTCTGTGCTCATGCTTCCTCAGCATCCGTTTCAGAGGTTGACTACCCCTGCAGGCACTGTTGTGCTCCAGCTTTTGTTCTTGTAACACAGTCCTAAGGGAACACAGTCCCCAAAGAAACAACATGATCTTGGCGGAGACACAGCTCAGCTCCAGTCACTCAACCACTTAGATAATTGCACAAAGTCCTTTACAGGTTTTCACAGAGACCTCTAGGTTGTCCTCCATCCCCGGTGACTTCCCAGGCTGGCCAGCTGGTTCTGACTACTACAGTCACCACATTACCAATCCATTTGCTTCCACTCCTGTTCCCAGAGCAATTCATTTGCCGCACAGCCAAGTGAGCCTTTTTAGAATGTAAGTCAGATATGTCACTTCTCTGCTTAAACTCTTCAATGGATTCTCACTGTTCTGAGAACGAAAGGCAGACTCCTTTCCAGGGCCTAAGTGATCTTGCCGAGGCCTCCCTCTCCAACTGCATCTTAATCCACTCCTTCCACATGAAAAACTCTAGCTGCACAGGCTTTCTTTTCATTCCTCAAGCGTTCCAAGCCATTTCTACTTCTGGTTCTTTATAATTGCCACTTCGTCTTCCCAGGGCACTTTTCCCTGGTGAGTTCATTTTCATCTTCCAGATCTTCACACTAGCATCACGTTTTCTGTAAAAAACAGGCTAGATTTCACCAGAATGTCCTTTTCCTGGACACATAGTTAAATTACATTTCCCAGCTCCTTGCCTCAAGGTGAGGCTGTGTGCATAGTCCTTCCGGTGGAAGGTAAATAGAAGTGATGTTTCACTACCAGACAGGGCAGTTAAAGAGTGGATGAACCTTCTCTGTATTCTCCACCCCTTCATCTGCCTTTCAAGGTGACCTTGATGCAGGTGTTTTGAAGATGGAGTCAGAGAATAGACCTCTGGATGTTTGAGCCCCGGCTTAGAGGAAAATTGCTTGACCAAGAACATCCACGTTGGTTTTTACAAAGAATACCCTCTTTTGCATTAATTTAGTGAGTTTGGGGACTGTTACAGTCGTTAGCATTATATGCCCTGGCTAATATATCTTCTCTGGACATCCTGTCCACCTTAGTCTTAATCACAAAACAAGGAAACCCGTGTTTCCTTCAGGGTGCTTCAGACATTTAATTATTTTACCAGATGCCAGTTTACACTATCCCTTGTCCTATTAATAGGATTGGGGAAAAAATGCTCACATGAGGAAATTGAGAGAATGATTTTACCAGTTACATTTTGATTGTGAGCTCCTTCCCCCCCCACCCCCCACCAAAAAAAAAATCCTCCTAAAGAATATCTCAAGTTAGATTTTTCATCTCATAAGACTAGAAACCTGATGGTTGTTGGCATTGGCTCAGGAATTCAAGGATCTTAGCAGTTAGGTCTGTGTGGTTCTCTTGGTCTCGATTCTCATGGTCACAAGAGACACCTTGTGATTTGATTAATCAGGAACACCCTACTTAGCCTCCTCAGGAGCCTCACAGATTGCCACAGTCCCTGTCTTTTTGGTCTTACTTCAAGGGTCCTTCTACATTGTTAATACTCTGGTGTAAATATGTTCCATTATTCCCTAGAACATGACTGAGATCAGTCTGAAACACTAACATTTTAAATACATTTGCCTTCCCCACCCCTTCCCACATCTCAGTGACTTGTCAGCAGCTCCTCCAGTTCAAGGCTGTTCTCCCTCTAGCTCAGTGGGGGTGGGGAAACTCACGGTTCTGTTTACTTCACTCATTCTTTACCCCTCTGTCACTTCTAGGATTGGGATGGGGAAGGGTATATTAGAGGCAAAAAGGCTAAACTTTTGGTTTAGTTTGGCTTTATCAGTGTGTTCTACTAAGACAAGCATTTAAATGTTGTTCAGTGTGTGAGGTGTTGGGGTTCTTTGGAGCCACCCCCTGCCCCCTGGGGGCTTTTGCACTAACTGGCTCTGGTTCCCTCCTTAAGATACTCATCCCACACCCCTCAGCTTCTGACCCTGACAGTGTATCCATAGCCTCCTAGTGCTAAAGAACCTCACCCTGGCTGGCAGCCCTCCTGAGAGAGGTCTCAGCAAACATCTTAAGAGTGGTTACCTTTTTGGGAGCCCCCAGGAAGCTCCCACATGTTTGTCCAGCCAAAGGGCAGAAGTGCAGCCCGACTAGCATCTGACTCCTCTCCCCTCGCCCTGCCGCAGCTAGCCTGACTCTGACCTCTCCATTCTCTCTGGCTCCAGACCCTTTTAAGTGTCTTGGGTTACTTTCTCCCAACAAGTCTCCACCCCAGTGGCCTTGTTGGAACTGGGGCTGTACGTTTCTGAGTGCAGCAAGCCTCCCGCTAGAGAATGTGATGCTGAATGAATATAAGGTCTCTCCCTGTCATGGGAATACAAAATGACTACAAGTGGTCCTCTTAGAGCCCTCCTCACCTGATTGAGGATAGAGGGAACAGCCCTACTTCTTTACCTTTCAGGGGGACGTTCTCTCTATTCCTCCAAATTCCCATCAATCAAGCTGGTATTTCTAACTTCATGTACGGTAGGAGGGTTAGTGAGCTCTGGATCAGCTTTATTATCTAAGAGTAAATCCTATGTTGGGCTTCCCCAATGGCTCTTCATCCACCTGCAATGCAGGAGATGTGGCAGGAGCTGCAGGTTTGATTCCTGGGTCAGGATCCCCTGGAGAAGGAAATGGCAACCCATTCTAGTATTCTTGCTTGGAAAATCTCATGGACAGAGGAGCCAGGCGGGCTACAGTCCATGGGGTCACAAAGAGTCGGACATGACTTAGTGACTGAACAACATATCCTATATAGATATATCTAGGGCCTTTATTTAATATCCCCTTATTGTGCCAGTATTTTTAAAAAATATTTATTTATTTGGTTGTCTCGGGTCTTAGTTGTGGTGTAGGGATCTTTCGTTCCGGCTTCTCTTTAGTTGTGGCTTGCGAGTTTAGTTGCCCTGCAGCATGTGGGATCTTAGTTCCCCCACCAGCATTGAACCCATGTTCCTTGCATTGGACGGCAGATTCTTAACCACTGGACCACCAGGGAAACCCTTGCACAAGCATTTTTATAAAATGTGAATTGTTCTTGTGTGTGTGCTTAACTTACCGAGTACTGTCAACAAATTTTGTCTTATGTCTTACTTTTTTCCTTCACTCAACTATATTTTTAATATCTATCTGTTTATCAGGGCTCAGTCAGGAGAATAGAAACCACACTAAATGTTTCAAATAGAGGATATTTAATGCAGAGAATTGATTCCTAGTGACAAAAGCCAAGTCAAAAGAAAATGCTTGATGTAATTAAAAATTGAGAACTGGAGAAATCAGATACTGTCCAAAGGCCTGGGAAAACCAAGCGGAAGAAGCAATGTGATTATCAGAAACCAGGAGCTCAGAGAAGCGGCCGCTTTTGACTGGTCAATACTCAGACTTTGGTGGGGGAGGCTCCCTCCACATAACCTGGCCTTGAAGGTGGGGGCACACGGTCTGACTCTTCTCTGGCTGTCATGCCAGAAACTGATCTGCTGCTGGTATCTCAGAAGTGTAGCGAAGCTGCTGCAGAGTGCAGAAGAAGCCGGTAGCCAGAGCCAACTGTCTGCAGCTGAAGTACGTAACAGCAGCTGGAAAACAGGAATGAAGACCCTCCCCCCTGTGTTTCACTTTCAGTTTCCCTTTATGACATCTCTTTGGCAGAACGTAATGGAACCACCTGGCAGTGGATTCTGGGAAATACAGTTTGCAGAGTCACAGCTGCAGCAACACAACTCCAGAGTGTGTATGTGGGGGTTGAGAGGGAGGTGTGTTGCAGAGGGGGATACAGAGAGTGCAGGAGCCAAAAGAAAATAGATAAATAACCAGAGCATTCCATGTATTAATAGCTGCTCATACATCTAGATTGTTGTTTCTGTCAGCTCTGAAGTTTTTCCTAATAAGCATCCACCATAGTGAGCTTATCCATTCTCCTGGTTGCCTCAAATTCTTTGCCATCTGGATAAATTAAAACCCTTGCAGTTTAGGATTCTGAGTACAAAATGAGTTCCCCCAGTTATATGCACTCTGAGATTTGGGAGGTAAGTGTCATGTTCCTGCTGCTTGGCTGTTGCCAGAGGCAGGTTTAGATGTTGGGCTTTCTGCAGCAGCATTTGCATCGAAGCCAAGGACAAAAGGATGCATACTGTAGTGGCTAAAGTTCAACGTAGAACTGGAGGTTCAATAGGTAAAATAAATCTACTTTGTACAAGTTTGGCTTTGATGGTTAAGAGGGAAAATTATTGGAAGGATATCATAAGTTACTCAGAGAACTAATGGAAAGTCCAGGGAGTGAGGCTTAGAGAACAGACAGGAGCCAGGAGAGGATGAACAGCTGCAAAAACTAAGGTCAACTTTAGAGTCATCATGGTTAGGATGGCATTGCTGGCACCATTGCTACTTGACTTTTTTCCTCACTCTTGTCGGTACATAGAGTGATGCTGAGAATTGCATTTCCCTCTAAGTTCATGGCACTTTAGGATTGGTTCATGAAAGGCCCCTCTCCCATTCTTTGTTATTTTGTTTGTTTCCTTTATTCCCGATTCATACTTCAGTTTCTCTTATAGCTTCACAACATATTTGTTGTGTTCGCCTGGACACCTGTGTATCCTTGGCAAAATAGATGGTGGTTTTGGTATATGTGTGTTTTGGCAGAGACTGCCAGCTGATCCTCACACCCATTTTCTTCTTTGTGGGAAATCAGCTGGACCCTTTCCCAGCTTCCCTTATTCTTAAGTGTGATCAAGTGGAAGATAGTAGAACTAAGGTGTGCTATTCCTACGACCTGGGTCCTTAAATTTTCCTATGCATGGTCCCCCATGTTATTTCCAATTTGGCCTTGGAGCATATGACCTTGAAAGCTACACCTTGAAAGAGCCAGAAGATGGAAGGAGCCTGAACACCACTTAGAGGAGAGCCACCCACCAATTGGGAGCATCTGTTCTGGATGTCTCATGAGTGAGAAATAAATTTCCATCTTTCTCAGCCAGTGACTAGTGATCTTTCTTTAAAATCCCTTTTAATCGAACACATCAGAAAAGTAAATAAAACAGGGCCCTAAAGAAAAGTAAACAAAAATGTTAAGCCTAATGGTTTATCACAGGCCAGTGCCCAGGTAGGCACCACCTAGACTGAGAAACGAAGTGCTGACAACACCCAGAAGCCTCTTTTATGTCACATCCCAAACGGGAGCAGCTTTCTCTCAACATTACAGAATTGCCACCATCCTGACTTCCAGAACACTGATTTCCTTGCTTTTCTTTATAGTCTTATGGTTGAGCTGTTTAGTTGCTCAGTCGTGTCCAAGTCTTTGCATCCCCGTGGACTGCGCACCAGGCTCCTCTGTCCATGGGATTCTTCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCTGACCCAAGGATCAAACCCACATCTCTCATATCTCCTGCACTGGCAGGAGTGTTCTTAACCACTAGTGCCACCTGGCTGAAATACAACCAGTTTTTGTATGTTGACCATGGAGCAGCACCCTTGCAAAGTAACCTCACTTACTCTAGTGATTTATCTGTATTCTTTTATTTTTCTACACATATTATCCTCATAATATGTGATTATCATATCAGCTTATTTCATGCTTTCTAATTCTATATCATTTATTCTTAGCCATGATGTACTCCAGGAGGTCCATCACTGTGTTCAAGTGATGTTGGTAGAAATCTTTGAATCATTCTCAGACCTGAAGGAAGAACTTTCAGTGTTTCATCACTGGGTGTGATATTTGAAGTGAGATTCTGATTAATGGATGTCAGATTAATAATATGCTCTACTTGCTATTACTTGTATTATGAATCGAATTTTGAATTTTGTCAAATGCTGCTTCTGAATTGAGATGCTCATATATTTTTTAAAATTCTGTCCATGTAGCAAATAAAAGATTTATTTATTTATTTTATATGTGAAATCAACCTTAATTTTTTG EMBV3_30817 CCATCGACGGCTTAGAAGATGACCAACATGGACAACTGTATCGACCGATGGACTTACCAG Control NULL NULL 0 EMBV3_34246 NULL NULL NULL NULL NULL NULL EMBV3_02019 CATCCACAGCTTACTCCCTTCTGTACAGAGGCTCCCAGGACAGTGCCAGTACTTGGGCTT Variant GeneID:540516|ERI3:NM_001113242:277_cdna 838^989 5 EMBV3_08949 GeneID:540516 3 GENE ERI3 MGC134375 PRNPIP ERI1 exoribonuclease family member 3 EMBV3_03709 CTGGCCTAGGACTGATGGGAATAAAAGATGAAGAGGAAAGCACCATTCCACAAACATGTG Gene GeneID:532864|MGC134577:NM_001038154:356_cdna Constitutive 0 NULL GeneID:532864 25 GENE MGC134577 NULL exonuclease NEF-sp EMBV3_27857 TAGTGGCATCCTTCGCCATTGCGGGCCTCGTGCCCCTCCGAGACGACGGGAACATGCCCG Variant GeneID:338064|NDUFA3:NM_176659:16_cdna 98^175 1 EMBV3_05902 GeneID:338064 18 GENE NDUFA3 NULL NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa EMBV3_42461 GCAAAGTGTTTAAGCCTGGTTGCAATAGTATGGGACAGAAACTGGTATCCTTGGTCTCCC Gene BVT0102_057308 + 0 NULL GK000010.2:12036602-12041357 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015999 TCONS_00016002 TCONS_00016000 1 XLOC_008607 Coding TCONS_00016002 XLOC_008607 Coding Coding CLPX 10:12040212-12076701 j TSS11169 3471 1 TCONS_00016002_3 142 14 0.905256522692392 0.00607044740335887 0.00751946273216762 0.00592586050251356 0.00390118794254829 0.00713128843076335 0.00244313805372618 0.00671529374847655 0.00484649162733747 0.0149529088525906 0.00125488625054563 0.000782028273326007 0.00126064852547571 0.00151574007051502 0.00379579956358844 0.00352874308580499 0.000130439306435678 2.10091769682464e-08 6.41115328824055e-06 0.00461861496002006 0.000372625131028328 0.00113817286521563 1.06864554385359e-05 0.000127003706227835 5.37960075370124e-06 0.00527994135715042 0.00520620855068593 0.002711845058762 0.000307672245119313 0.000477410123399723 0.00104895013316712 XM_001788655.4 CLPX PREDICTED: Bos taurus ClpX caseinolytic peptidase X homolog (E. coli) (CLPX), mRNA. 0.0 6257 100.00 0.999135695764909 NM_006660.3 CLPX Homo sapiens caseinolytic mitochondrial matrix peptidase chaperone subunit (CLPX), mRNA. 0.0 3314 93.68 0.631230193027946 TCONS_00016002_3 sp|O76031|CLPX_HUMAN CLPX_HUMAN ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial; 2e-95 292 100.00 0.992957746478873 1 coding 0 0 0 0 -0.332285847422743 0.616372723392046 -0.54682470391467 0.000174735240204996 GTATTTCTTGTAGTCGTATTCATATACCAGTTTTAGGAAGGCTTGGGACCTTTGAAACTCAGCTTCTACGAAGAGCTCCTTTTAGAGCTTTTACAGAAACACCAGCATACTTTGCCTCAAGAGATGGGATAAGTAAAGATGGCTCTGGAGATGGAAATAAGAAATCAGCAAGTGAGGGAAGCAGTAAGAAATCAGGCTCTGGGAATTCTGGGAAAGGTGGAAACCAGCTTCGTTGTCCTAAATGTGGCGACTTATGCACACACGTAGAGACCTTCGTGTCATCCACCCGCTTTGTGAAGTGTGAAAAATGTCATCATTTTTTTGTTGTGTTATCAGAAGCAGACTCAAAGAAAAGCATAATTAAAGAACCTGAATCAGCAGCAGAAGCTGTAAAATTGGCATTCCAACAGAAACCACCTCCTCCCCCCAAGAAGATTTATAACTACCTCGACAAGTACGTTGTTGGCCAATCGTTTGCCAAGAAGGTGCTTTCAGTTGCTGTATACAATCATTACAAGAGAATATATAATAATATCCCAGCTAATCTGAGACAGCAGGCAGAAGTTGAGAAGCAGACATCATTAACACCTAGAGAGTTAGAAATAAGAAGACGGGAGGATGAGTACAGATTTACAAAGTTGCTTCAGATTGCTGGAATTAGTCCACATGGGAATGCTTTAGGAGCATCAGTGCAGCAACAGGTAAATCAACAAATACCTCAGGAAAAACGAGGAGGTGAAGTATTGGATTCTTCCCACGATGACATCAAACTTGAAAAGAGTAATATTTTGCTGCTTGGACCAACTGGGTCAGGTAAAACTCTTCTGGCACAAACTCTAGCTAAATGCCTTGATGTCCCTTTTGCTATCTGTGACTGTACCACTTTGACTCAGGCTGGATATGTAGGTGAAGATATTGAATCTGTGATTGCCAAGCTGCTCCAAGATGCCAATTATAATGTAGAAAAAGCACAACAAGGAATTGTCTTTCTGGATGAAGTAGATAAGATTGGCAGTGTGCCAGGCATTCATCAGTTACGGGATGTAGGTGGAGAAGGCGTTCAGCAAGGCTTATTAAAACTATTGGAAGGCACGATAGTCAATGTTCCAGAAAAGAATTCCCGTAAGCTACGTGGAGAAACAGTACAAGTGGATACAACAAACATTCTGTTTGTTGCATCTGGTGCTTTCAATGGTTTGGACAGAATCATCAGCAGGAGGAAAAATGAAAAGTATCTTGGATTTGGAACACCATCTAATCTGGGAAAAGGTAGAAGGGCTGCAGCTGCTGCTGACCTTGCCAATCGAAGTGGAGAATCAAATACTCACCAAGACATTGAAGAAAAAGATCGTTTATTACGTCATGTGGAAGCCAGAGATCTCATTGAGTTTGGCATGATTCCTGAGTTTGTGGGACGGTTGCCTGTGGTAGTTCCTTTGCATAGCCTAGATGAGAAAACACTTGTACAAATACTAACCGAGCCACGTAATGCTGTTATTCCTCAGTACCAAGCCTTATTCAGCATGGATAAGTGTGAACTGAATGTTACTGAAGATGCTTTAAAAGCTATAGCCAGATTAGCACTAGAACGAAAAACAGGTGCACGAGGCCTCCGGTCCATTATGGAAAAGCTGTTACTAGAACCAATGTTCGAAGTCCCTAATTCTGATATTGTATGCGTGGAGGTTGACAAAGAAGTAGTAGAAGGAAAGAAGGAACCAGGATACATCCGGGCTCCAACCAAAGAATCCTCGGAAGAGGAGTATGACTCTGGAGTTGAAGAAGAAGGATGGCCTCGTCAAGCAGATGCTGCAAACAGCTAAACTGTCAGACTTCCGTTGTGTATATAAAGGTGTCCTTCTTTTGTTTAGGATCATAACTGTCTCTGCAGTCTGACATTAAAAGCATTGGATCTATCTTGGATATCATATACATGGTCAGAAGCTTTTAGGATAAAAATCAGATCATGTATATTATGTAACATCACATTGATTTATACAGACTGACATTACATGGACTTTAATGACACAATGTTCCGAGAGAATATGTACATTATTTTGTTTCGGTTTTTAAAAAATATACTTAAAAAAAAAATCTTAGGAGTTCTTTTAAGCAATGCAGGTGTTGCAATAACTGTGGATTTTACAATAATGTTACTCTACAAATGGGAAAATAAATTCTTTAAAATTGAAGTTGGGATTCCATTCTTTAGCTTGACTTTGTCTACTCATGTTTGTTTCCTGAAAAATGTTAGAATTTTATCCATCTTAAAAATTGGAACGGAAGTTTCCAAGTAGTTAAAGATTTCATGGAAAAAGTACCCTGAAGAGCCATACTTTGATGATTTGTTTAGCTGTGTTCTTAGTCTTATCCACTGATGCACGACACTGACTTCCCGTTGGTACTATTAAGAAAAGACCATTCTCCTGCTAACTTGTCTGATTTATTTGCCGTCTTTGATCCATTTTAGTACCATGAGTGAGCAGATGAAATTAAAAGTCTGCCTTAAATCTTTAGAGAAAGACTACATCTAATTCTAAAAGTCGCATGCAGCATCAGTCATAACAGCCATATGCTGAGCTAAATAAAATATCCTAATATTGTACACTTACCTAAAATACTAGTTTTTTGTTTTCTGGTGCTGAATATTTGTCTAATTCTTTGGCTTCATGGAACATTAAAGAAAATCTATGCTTTACTATCAGCAAAAGTGAATGTGTTCATACTAAAATATAAGTTATTAATTTTCATTATGTAGAAACAGTGGGGGAGGTTTGGGGGGCTTAATGAAAATTATTTCATTTGATGCCATAATATTAAAATACTTGGATACCTTTAAAATTTTTTTCTTTCCCTTTATATTGATACAAGTTTCTATATTCTTCCTTCACTTCAGCCTTATTGGAAATTGTTTAAATCAGAGTACCTTTAAACCTTTGTTTTCAATTTTTGGTTTATAAATGCTTGAGTTTTCCTTTTAACTACATCCTACCCCTTTTCTTAGGGAAAGAACCTTAAACTATTAGCAAATTCTAAATCTTGTTGATGGAGTTGGGTTTTCTGTGATGTAATAAGAGATACCTATTTATGGCTGGGGTAGGACCAGAAATGCACTTCTGCAAAGTGTTTAAGCCTGGTTGCAATAGTATGGAACAGAAACTGGTATCCTTGGTCTCCCTAGTAATGGTTAACGTTCTTCTCAGGAAGGGTTTCATATCATAACTGTTTATTATCTTTTTCTTACAGGCTCATCATTTTCCTTTTTGTAGAGTGAAAATTGGAGTAGCTATTAAATGTATTGAAGTTAGTCCTCCAGAAATGGACTGGGAGACGTTTTAGTCATAACAACTTACATTTGGTTTTGAAAGTTGTTAACAAAGCATATTGATGTTTTTAAATTAAACACAACTACGATTTGTATCTTGAAACTTGTTTTGGCATTTGAATAAAACAAAAGGATTAAATGAAAGC EMBV3_06663 CAGATAGAACATATCTCATCTTAATCTTCAATGCGGTCAACACTACAAGCATGGATTTCG Gene BVT0101_026550 - 0 NULL GK000017.2:5016572-5298963 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29980 CACAGAAAGTATAATGGTGATTACCAGAGGCTGTGGGGAAGGGAGAATGGGAATATGGGG Gene BVT0101_015062 + 1 EMBV3_03626 GK000029.2:17925749-17956883 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04978 CTGGGATGGATTTTGTCTCTTCTTCAGCCACTCATTCCAGCCATCTTGGGAAAGACAGCT Gene GeneID:523056|LOC523056:XM_002690964:342_cdna Constitutive 0 NULL GeneID:523056 10 GENE LOC523056 NULL similar to BCL2-like 10 (apoptosis facilitator) EMBV3_04649 CATGGGAGCTATCTGGGCTAAACCAAGGCCAACCCTCAGTCATCTGGCAATCAGGATTAA Gene GeneID:516087|SCARA5:NM_001102499:52_cdna Constitutive 2 NULL GeneID:516087 8 GENE SCARA5 MGC139192 scavenger receptor class A, member 5 (putative) EMBV3_07270 GTGCTTCCCATTTGTGCCACAGGAAAGAACCCTCTTCTAGTTAGTACAATGACCTGCCAT Gene BVV0102_161005 + 0 NULL GK000017.2:33532253-34749101 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40937 TTTGTGATGGCCGCGTGTTTAGTGTTAACCCCCTTGCCCCAGTGCAAATCCCCGTGTTTT Gene BVT0102_205696 + 0 NULL GK000007.2:19432738-19450448 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43099 ATGAGCCTGGAGAAGGACATCGCGATCAAGACCAACAGCCTCTTCATCGACCGCCACAAA Gene GeneID:510343|TEKT4:NM_001038069:123_cdna Constitutive 0 NULL GeneID:510343 25 GENE TEKT4 MGC134304 tektin 4 EMBV3_18109 GCCCAGACGTCTTCCACCCCTCCCTCAAGCTGCCCGTCTGCACGAGATAGCGTGTCCATA Gene GeneID:618914|MAFK:XM_002698234:848_cdna Constitutive 0 NULL GeneID:618914 25 GENE MAFK NULL v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian) EMBV3_36364 GCGGCCGACTTGGACCTTCAAACCCCAAAAGGTCGTTCTGGGGTTGGAGTTTTCCCCTCC Variant GeneID:100316905|LOC100316905:XM_002689763:22_cdna 207^368 9 EMBV3_02070 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_29742 TCATCAGTGTTCTGGGGGCCCTTCCTGAGAGTTTAACCATGTCCTGGCTCTCTTTCTGCA Gene GeneID:615363|LOC615363:XM_002688607:375_cdna Constitutive 0 NULL GeneID:615363 7 GENE LOC615363 NULL similar to olfactory receptor 371 EMBV3_29698 CACAAGCAAGATGGCGGATCTGATACTCTTTAGAGCCCTGAGAATTCCTCTTCCAAGCCC Gene GeneID:100337438|LOC100337438:XM_002686187:401_cdna Constitutive 0 NULL GeneID:100337438 3 GENE LOC100337438 NULL epidermal growth factor receptor pathway substrate 8-like protein 3-like EMBV3_41838 TGGAAGTCGGGATGTAACTAGGGGGAGGAGTGAGCAGAAGTCCCAAACGGAGAAAGGAAT Gene BVV0101_043330 + 0 NULL GK000008.2:86128350-86200481 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00233227 1 XLOC_142709 NonCoding TCONS_00233227 XLOC_142709 NonCoding NonCoding - 8:86198285-86199805 - TSS174731 1520 2 TCONS_00233227_1 72 1 0 0.000366996046298396 0.000211546669297083 0.00010349874592201 1.0926520608367e-05 8.44516934412314e-05 4.70665361572248e-06 6.52230926043857e-05 0 0.000373742516825122 8.12071721778694e-06 1.5060437011428e-05 0 3.77537374306562e-06 0 0 6.95040506492155e-05 0 0 3.7741791762536e-05 0.00104086454391347 1.99719399181107e-06 4.88201316427744e-06 0 0 0.000332749280874285 7.41628434171401e-05 0.000146478745587927 3.79151787629296e-05 6.06827516024273e-05 0 XM_002701174.3 LOC100335269 PREDICTED: Bos taurus putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase-like (LOC100335269), mRNA. 1e-14 86.0 92.98 0.0368421052631579 0 noncoding 0 0 0 0 -0.00156823612576623 0.990826748553608 0.000877976874028012 0.986268377484638 ACTAATACAATTATGTAAAGTTTAAAAATAAAATAAAATTTAAAAGAAAAAAAAAAAGTTATTACTGCAGAGCTCTGGGACAGAAGTCCTGAAAGGACCTCGTTTCAGAAGATGCTACTAGAGCAAGAAGGATTTAAATCATTTTCCTTAGGAGGGGCTGCACAGTCTCCAGAAAGCGAGAGTTAGAGAAGATAGATATTTCACAGTTGGAACCAAATAGAAAGGAGGCATTTCACGTGCTGTAACAGATCTACTGTTTTTAAAGTCTCTTTGGTGATATCTGACACTAAGGCTACTTGTATATTACATTATAGATTGTCATTTCAGTGTCTGGACCATGAAATGTTACTAGTGTGAAAACAAAAAAGCAGAGCCTTTGGCTCCTTCAGACAGTGAAAGCAATTTGAGTGGGCTGAGTCAGATCTATCTGGAGGGAGATCTGCTACCTCAAAGGGAACCGCCAATGAGGGTTCTGCTCATGTGGCTCTTAGATTACTCCCAAAAAAGCAGTGAAGCAGTAAACCCAGCAGGCAGTGGGGTCAATCTGCCACTTTTCCAACTTCCTCAGAATTACCACCCTACTCCTTGTGAACAACCGAAACTCTGGAGAGTTATTTCCCAAGTTAAAGATCCCGATGCAATTAAGGTGAGAGAGCGGTTGATCATTTCTAAAACCCGGTAACTACACGTGGGCACACAGCGCAGAAACTGATTCCTTTCTCCGTTTGGGACTTCTGCTCACTCCTCCCCCTAGTTACATCCCGACTTCCAGGTCCTGACCACCTTTCCCTCTGCAGCCGCCTCGGCCAGAGCACTGGTCCCACCTCGGGATGACTGGCCCTGTGGGACCAGGACGGGATCTCTTTGGGGTGATCAGACCCCAGGCATTAGGCCTTCTCAGATGACTGGCTCTCAAAACGAACGCTGCCTCCCCGAGTTGACGAGATCCCAAGATTGGGTTGAGGCCTCTTCAGGGTGAACCAGCTCCAGGGGATTGGAACTTGGGACTCCTCAGGTGGCCGACTCCCGAGAATAAGGCCTTCTCGGGGGTGACCGGGCACAGGGACAGGAAGGGGCCTCCTCTGGGTGACCGGTCCTTGGGAACGAAACAGGGCCTCTTCGGAATAACGGGACCCGAGAAGAAGATGGGGCTTCCTTAGGGTGACTGACTTCCGGGATGAGGCTTCTTTCAGGGTAACCAGATCCGTAGGTCCGAACGCGGCCTCCTTGAGGTGACCGGCTCCGATAGTGGACGGGGACAGGGCTGCCTGACCGGCTTCCGGGGATAAGGCCGTCCCGGGGTGGCCAGATCCTGGAGCCTGGATGTGGTCCTCGGTGACCAGCTCTGGGATACCAGGAAGGGGACGAGATGAAGCTACCGCCCGACATCTCCTGGGAACTCGCGCAGGCACAGCTGCGTCCCTTGTGCCCAAGGGCTCCTTTCCCTGGGCTGGGCCTCGCGGACTCTGCCAAGGCTGGAACCGAAGTTCGAAGCCGGAGTCCGAGTGCTGCGCCGCCGG TCONS_00226110 TCONS_00226111 TCONS_00226112 TCONS_00226113 TCONS_00226114 TCONS_00226115 TCONS_00226116 . 5' 677 TCONS_00226110 TCONS_00226111 TCONS_00226112 TCONS_00226113 TCONS_00226114 TCONS_00226115 TCONS_00226116 . 5' 677 EMBV3_37883 CCATCGTGACGCTGGAACAGTTGAAGAGCTCACTCATTATGCTTCAGAGAACCTTTGATC Gene GeneID:505581|GRAMD1C:NM_001103229:44_cdna Constitutive 0 NULL GeneID:505581 1 GENE GRAMD1C MGC157064 MGC159522 GRAM domain containing 1C EMBV3_41683 ATCTCACTATCTACCTCTTCTCTGGAATGCTCGTGGGTGGTTCAGAGGAATGATGGCTCC Gene GeneID:509354|NME6:XM_002697054:531_cdna Constitutive 0 NULL GeneID:509354 22 GENE NME6 NULL non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase) EMBV3_36641 ATGGAGGTGCTGCCTCTGAAGGAAAGAAAGCTTCGGAGAATAAAGGCCCCAGAGGACTGT Gene GeneID:100295263|LOC100295263:XM_002689482:23_cdna Constitutive 0 NULL GeneID:100295263 8 GENE LOC100295263 NULL hypothetical protein LOC100295263 EMBV3_07924 GGAGATTGAAGAGATGAATGTGTGCGACAACCTGGGGGACCACCTCGTGGGCAATGTTTA Gene GeneID:615198|TMEM149:NM_001034778:742_cdna Constitutive 0 NULL GeneID:615198 18 GENE TMEM149 MGC127195 TMEM149 transmembrane protein 149 EMBV3_20554 CAGGATGGAGACGTGAGGATGGGAGGGTCCTTCCGAGGGGCTTTTGGCAACTCAGATAAA Gene GeneID:507365|NET1:NM_001034296:20_cdna UTR3_Alt 2 NULL GeneID:507365 13 GENE NET1 MGC127767 neuroepithelial cell transforming gene 1 EMBV3_25674 GCGGGCTTTAAAACAGCGTGAAGTGGGTGGCAGTCGACCCTTCCTAATGCCTGAACTTTT Gene GeneID:539580|TUSC1:XM_002689498:36_cdna Constitutive 0 NULL GeneID:539580 8 GENE TUSC1 NULL tumor suppressor candidate 1 EMBV3_04242 ATACAACCCCACAGATTGGAGATTTTGGTGCTACAGAAACTGCTCTCACTTCTGCTCCTC Gene GeneID:518785|LOC518785:XM_002691468:332_cdna UTR3_Alt 2 NULL GeneID:518785 11 GENE LOC518785 NULL similar to ATPase family AAA domain-containing protein 2B EMBV3_04595 GCGCCGTGGGGCGCCCCAGGACCAGGAGCTGTGCTGTGCACAGCACCTGCCAAATACACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42310 GTGGCCATCTCCTGCTCATTGCCTCACCTCCACTCACTCCTACACATACTTCTGCTGAAT Gene GeneID:615170|LOC615170:XM_002691553:7_cdna Constitutive 0 NULL GeneID:615170 11 GENE LOC615170 NULL similar to olfactory receptor Olr418 EMBV3_42355 GGGCCCACTCAGCTCTGCCTTTTCTGTTCCCCACTTTGGTTGTGTGTTGTCACTTTCAGA Gene GeneID:507912|RPA2:NM_001045984:96_cdna Constitutive 1 NULL GeneID:507912 2 GENE RPA2 MGC137236 replication protein A2, 32kDa EMBV3_40795 GAGAGTTCAACGGCAGACTTTGGAAATGCCCCCGAAAGGAAAAAGCGGTTCTGGAAAAGG Gene GeneID:100126055|PIN4:NM_001105657:2_cdna Constitutive 0 NULL GeneID:100126055 X GENE PIN4 MGC159508 protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) EMBV3_17822 TTGTAAAGGGGTCAGGGGACAGGAAGATACGCAAAGTTATGATTCGTCCTTTTCTTCCCC Gene GeneID:536284|ECHDC1:NM_001035415:59_cdna Constitutive 2 NULL GeneID:536284 9 GENE ECHDC1 MGC129066 enoyl Coenzyme A hydratase domain containing 1 EMBV3_01729 GTGCAGAGGGCTTTTATAACAAATGTGGAGAAATTTTGGAGGGCTGTGATTTTTCCCAGT Gene GeneID:100336929|LOC100336929:XM_002696601:83_cdna Constitutive 0 NULL GeneID:100336929 21 GENE LOC100336929 NULL zinc finger, AN1-type domain 6-like EMBV3_32625 TTTCTTCTCTCATCACCAAAGGAGCCCGTATGGAGGTCTGTCTAGCGGGGTGTCTGAGGT Gene GeneID:511414|PPP1R13B:XM_002696847:685_cdna UTR3_Alt 2 NULL GeneID:511414 21 GENE PPP1R13B NULL protein phosphatase 1, regulatory (inhibitor) subunit 13B EMBV3_24658 TAACTTGACATTGTGGACATCGGATACCCAAGGAGACGAAGCTGAAGCAGGAGAAGGAGG Gene GeneID:100140254|LOC100140254:XM_002684871:9_cdna Constitutive 0 NULL GeneID:100140254 1 GENE LOC100140254 NULL similar to 14-3-3 protein zeta/delta (Protein kinase C inhibitor protein 1) (KCIP-1) EMBV3_29761 ACCCCTATGCGTGTGGTTGCATAACAGATGGGTTTTAAAAATATGTATTTCCTTGCGTGG Gene GeneID:540830|HHIP:NM_001099114:22_cdna Constitutive 0 NULL GeneID:540830 17 GENE HHIP MGC157270 hedgehog interacting protein EMBV3_14578 TCAGAATCGGTCAGGCGGCATGTGAGCAGACCAGGATAATACCACAGCCTGTCCAACTTT Gene BVT0102_088648 + 0 NULL GK000005.2:71469172-71475668 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00200126 1 XLOC_121778 NonCoding TCONS_00200126 XLOC_121778 NonCoding NonCoding - 5:71472277-71472831 - TSS149694 554 1 TCONS_00200126_1 80 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000905812656909131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.129254667826879 0.409633241660841 0.00157804898675304 0.974777589729496 TGCTCTCAGAGCTATTTAATCCTCCAGCATAATTGAGTTACAGCTTGTATCTGCGAGGCTGACTTCACATGCTTACACTGTACCCTAACCTGCATCCTTTCACCAATTCTGAACACACAAAAGAAACTGAGCCACCAACCTGTTCTACAAAGTTGAACATGAAGCACAGAGCTGGGAGGGGCGGGATGGCCAGAGTAGGGCTCTGCTGTGTATTGGGTGATCTGGAGGGACCCCTGGGTCCTGGGTCTGGAAAAGTTGGACAGGCTGTGGTATTATCCTGGTCTGCTCACATGCCGCCTGACCGATTCTGACAGTGGCACCGTGTCCCTTCTGCTCCCAGCTGTGGTGGCCCTGCAGAGAGTTCACCTGTGGGGTCCACGCTCACCACAGCCCCTGCTCTGCTTGTTCCCGTGGACCACAGGTTTTCTTCAGCTTCTTAGCTCATTAATCTCTCTATTAGTTTAATTCTTTTCCTGGGCAAGTGACTTCCTCACATTGATACTCTCAGAAAAAACAAACCTTTTCTGTACTTTTAACACTTTGTTTGCATTTTG TCONS_00195494 TCONS_00195495 TCONS_00195496 TCONS_00195497 TCONS_00195498 TCONS_00195499 . 3' 2838 TCONS_00195494 TCONS_00195495 TCONS_00195496 TCONS_00195497 TCONS_00195498 TCONS_00195499 . 3' 3391 EMBV3_24111 ACTGTCAGGGTATAAACACTATTTGTTTCTTTTTTAAAACATCTATAGTTTTGCTGTAAA Gene GeneID:511203|ANK3:NM_001105620:10_cdna Constitutive 2 NULL GeneID:511203 28 GENE ANK3 MGC151492 ankyrin 3, node of Ranvier (ankyrin G) EMBV3_03738 GAGGTACCACCATGTACCCTGGTATTGCTGATCGCATGCAAAAGGAAATCACTGCCCTGG Gene GeneID:533219|ACTC1:NM_001034585:73_cdna Constitutive 0 NULL GeneID:533219 10 GENE ACTC1 ACTC MGC128362 actin, alpha, cardiac muscle 1 EMBV3_08652 GAGATTGTCACCATAGCAGTAGTGGCTGCATTATCACTGGTTGCGGTCATTTTTGCGGGC Gene GeneID:282105|TYRP1:NM_174480:2_cdna Constitutive 0 NULL GeneID:282105 8 GENE TYRP1 NULL tyrosinase-related protein 1 EMBV3_23029 GCAGTCGGAAGCCTACAAGATGTGTGCGGAGAAGATCCAGGAAAAGATCAAGAAAGAGGA Gene GeneID:533921|LOC533921:XR_083714:47_cdna Constitutive 0 NULL GeneID:533921 7 PSEUDO LOC533921 NULL similar to High-mobility group 20B EMBV3_38844 ATGGACCCCCATGAGACGCTCGTCAAGAACCCATATGCCCACATAAGCATCCCGAGGGCT Gene GeneID:618457|LOC618457:NM_001078088:83_cdna Constitutive 0 NULL GeneID:618457 11 GENE LOC618457 NULL hypothetical protein LOC618457 EMBV3_21939 CCACACTGTTGGGTGGTTGATTTGCATCATCCTTTGAACTGAGACTGAGAGCTGCCCAGG Gene BVT0102_089477 + 0 NULL GK000013.2:73899704-74018885 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00050085 1 XLOC_030214 NonCoding TCONS_00050085 XLOC_030214 NonCoding NonCoding - 13:73927840-73928487 - TSS37261 647 1 TCONS_00050085_1 48 0.469860896445131 1 0 0 0 0 0 0 0 0 0 0 1.27186831817269e-05 0.000985374786417645 1.10531091670157e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000192993893394014 0 0 XM_005220096.1 SMYD4 PREDICTED: Bos taurus SET and MYND domain containing 4 (SMYD4), 2e-25 120 83.76 0.173106646058733 NM_022097.3 CHP2 Homo sapiens calcineurin-like EF-hand protein 2 (CHP2), mRNA. 2e-13 80.6 89.83 0.089644513137558 0 noncoding 0 0 0 0 -0.024620409736413 0.856756984756159 0.0486557015346286 0.31706381967596 CCGGGGAAGAAGGGATGGTTTCAGGATGATTCAAGTGCATTATGTTTATTATGCACTTTATTTCCATTATTACATCAGCTCACCTCAGATTATCAGGCCTTAGATCCTGAAGGCTGGGGAGCCCGTCCTACGGGAGGTACTATTTCTTTTTTTATTTTGGCTGCTCCGTGTCTCAGTTGCGGCACTTGGGATCATCAGTCCTCACTGTGGCATGCAGGATCTAGTTCCCTGACCAGGTATCAAACCCAGGACCCCTGCTGTGGGAGTCTTAGCCACTGGACCACCAGGGTAGTCACAGGAGGTAGTACTATTTTAAATTCAATCACCTGGAGTTGGGGGTGAGCGGTGTCTTTGTCTACCTGATACAAACATGCTGTACAAACCATGGGTACGCACCAGGGCCCACATGTGGTACCAGGAGGGGAAGGGCCACTCCTGGGCAGCTCTCAGTCTCAGTTCAAAGGATGATGCAAATCAACCACCCAACAGTGTGGGGTCCAGGGCGAAAGGACCGTAAGTCACATTTATTCTAAATATCTAAAAGTTATAAATCAAGCTCTTAAATAAAACATGTTCTATCCTTCCACTCTGACAAGTGTGCCTTCATAATGACCTTGAAGGCCAGGCCAGGTTCAGATTTAGACTCC TCONS_00046218 TCONS_00046219 TCONS_00046220 . 5' 28138 TCONS_00046218 TCONS_00046219 TCONS_00046220 . 5' 28138 EMBV3_33715 TGCCAGGAAGGTGGAAGGAAGTAAGTTTGATCTCATTGTGTAACTCAGTGCTGCGTCCCC Gene GeneID:505106|USP14:NM_001075189:44_cdna Constitutive 1 NULL GeneID:505106 24 GENE USP14 MGC140678 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) EMBV3_34686 GCAAGGTCTTTGGGACTTGCTCCTCCCACCTGCTTGTGGTCATCATTTTCTATGGGACCA Gene GeneID:618395|LOC618395:XM_002689126:103_cdna Constitutive 0 NULL GeneID:618395 7 GENE LOC618395 NULL similar to olfactory receptor, family 2, subfamily G, member 6 EMBV3_28303 AATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATAGAGGAAATAGCCTGCAAG Gene BVV0101_070975 + 0 NULL GK000008.2:91132282-91185515 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248730 TCONS_00091301 TCONS_00091360 TCONS_00210913 TCONS_00087260 TCONS_00065232 TCONS_00087286 TCONS_00141909 TCONS_00190489 TCONS_00176420 TCONS_00004714 TCONS_00238964 TCONS_00211233 TCONS_00004712 TCONS_00238380 TCONS_00167521 TCONS_00140862 TCONS_00063217 TCONS_00252111 TCONS_00049674 TCONS_00135546 TCONS_00087285 TCONS_00087263 TCONS_00091303 TCONS_00201529 TCONS_00087262 TCONS_00204791 TCONS_00004713 TCONS_00081837 TCONS_00219026 TCONS_00229354 TCONS_00084513 TCONS_00166151 TCONS_00251110 TCONS_00196835 TCONS_00137278 TCONS_00122146 33 XLOC_151675 XLOC_056076 XLOC_056135 XLOC_129423 XLOC_052423 XLOC_039954 XLOC_052436 XLOC_086336 XLOC_116524 XLOC_106198 XLOC_001092 XLOC_145630 XLOC_129743 XLOC_145047 XLOC_102357 XLOC_085291 XLOC_037944 XLOC_155052 XLOC_029805 XLOC_081769 XLOC_052424 XLOC_056078 XLOC_123175 XLOC_124525 XLOC_050714 XLOC_132345 XLOC_138849 XLOC_051600 XLOC_100989 XLOC_154053 XLOC_118500 XLOC_083488 XLOC_073701 Coding TCONS_00210913 XLOC_129423 Coding Coding SLC2A9 6:110001711-110012191 i TSS158420 10480 1 TCONS_00210913_14 983 0.834923664122137 1 0 3.56983425010152e-05 3.4714787048222e-05 2.83590339138569e-05 1.48490855909718e-05 2.04699254698394e-05 1.20797151711715e-05 1.57661586147613e-05 8.10713337066401e-06 1.41250597873946e-05 0.000576482691608721 0.000306549296364364 0.000173718393349341 3.2246483346913e-05 0.000117031799736716 5.8443833773894e-05 0.050296761603671 0.0246426280159569 0.0424434415400093 2.84731532705216e-05 2.28283198679927e-05 7.49904633043495e-06 0.0217410723689654 0.0170563294638378 0.0254351478144883 4.1524279239292e-05 4.13862873041173e-05 3.54280803513454e-05 0.00344305183887077 0.0021778579966396 0.00517151308518267 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 2e-166 592 95.65 0.0350190839694656 NM_014590.3 ERVW-1 Homo sapiens endogenous retrovirus group W, member 1 (ERVW-1), 3e-38 167 67.64 0.0490458015267176 TCONS_00210913_14 sp|P63132|POK5_HUMAN POK5_HUMAN HERV-K_19p13.11 provirus ancestral Pol protein; 2e-30 130 26.65 0.53204476093591 0 coding 1 1 1 1 -0.0330006163411211 0.952623948304659 0.00968189935335281 0.860985578477547 AGAGAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAGGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTATCTCTGTTAAGCAGCAGGAGGAAACAAACTAGCAATATTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTGGCCATAATGACACCTGGTTTCGCCTGAAGTTAGCTATTCTTGAGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATCTCCTTTATACTTTAATAAAACTTTATTACACAAAAGTTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACAACCTTTCATCTTGGGGGCTCGTCTGGGATCCTTCAGGACAAGGTAAGGATGCTTGGAGCTTTAGTTCTTTGTTCTCTTAGCGAACACGTTTTCTGCCATGCTTTACTAACTCTACGGTGTGCTTGTGTGAATGAATGGCATGCCCTGCGTGAAGCAAGTAAGGGGCCCTGCTCTGCGGTTCCACGGTGATCTCATACGGCTTATGGCAGAAACCTGTCGGGGCGTTATACTGACCTGCCAATGCCAAGAGGCACCCAATGTCTTCTTTGGGAACCGACCAGAAATGGGCAAAGCGTGTGGACCGAACTCTCCTTTCTCGGTCAAACTTTTCGGTCTCTTTGACATTTCATAACTCCTTGGGAATTAGAAGTACTAACCTAATCTATCGGATCATAGACTTTCAAGGGACTTGTGATCTATACTGTTACTGTGTACTGTGGCTTAGGTCCCAAACTTGGATTGGTAGTCAAGAAAGTGTCTAGCCTCGCTAGGAATCGAAAGTTCGGAAGCTAGATGCAGCTCTAGCTCCCAGAACATCTCTGAGGTTAAAGGTTACTCAGATTGGGACTGCAATGGGTTTTTTCCTTTGGTAATGCCGGCTCTTAGTGGATCAGAGGAGGCTGTTATACTGGTGTGGTGATGCTTGGAAAGAACATCTCAGTTTTATGTTCGCGTCGGTCTTATTGTGGTCGGGAAATACTCAGGGTCGTGCACAGGCACTCAGGTGACGAATGTTTCCTACAGCAGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACCCCGGGTGACATCAGAGGCAAGCAAGGTTAAGGGTGAAGAGCTGGACCTCAAGTAGGGATGCTATCAAGTCTACCCCTGGTACATCCCCACCCCATCTCGGTGGTAGAACCGGGAGGGACGAGTACGGCCCCTGCGTCGGTAAGGGACAGACTAAGTCCGACCAGGAAGGAAAAGCTTTTGGTGTAACATCTGTCTACACCCCCATCTAGAGCAGGGAGGGACGCCTCCGGTAGAAAAAATGGTGCTGGTCGCTTTTTTTCTCTTACAGATGGGAGCTAACAATTCCAGCCTCACTCCTTTGAACTGTATCCTGAAAAACTGGGATAGATTTGATCCCCAGGGCTTAAAGAAGACACACCTGGTCTTCCTATGTGATACTGCATGGCCACGGTATCCACTGGAGGACGACGAACGGTGGCCAGTTGGAGGGTCTCTTAAGTATAATACTGTTCTACAATTAGACCGGTTCTGTAAGGAACAAGGGAAATGGGTAGAAGTAGCATATGTGTTGCCCTTTTTCTCTCTGCGAAATATGCCAGACTTATGTCCTAAGGGTATAGATTTGGGCGTGAAATCTTCAGCTCCCTCCTGTCCTCTTACTTTGCCCCCGTACCGGGGACTCCAAACTGGGATTCAAACTGCCCACATGGAGGTCCAAACAACTCCTGTCTCAGTACAACCTCAGACTACTCTGGTTTCAGTAGAAACTCAGACCATCGAAGTAAGAGATGAGATGGAGGACAGGAGACAAAGAGAAGAGGAGAAACAGGTTTCTCCAATCTATCCCTGGGATCATATGCGCAGAGCAGCCAGAGAGACTGAGGAACAGCCACACAAGCTGTCGCCTCTTTATGAAACACCCACCGGAAGAAATAATCAGTCTGTGAAAGTTAATAAGCCTTTTTCTTATCAAGAAATACAAAGAATCAAGGAGGATCTGGGAGACTATTTAGAGGACCCAGAAAAATATATTAGAGCTTTTAAAGGTGTTACTCTGCTTTATGACCTCACTTGGAAGGAAGTGATGTATATCTTGGGACAAACGCTGACTCCTGAGTCAAAGACTCGAGTTTTGGAAAAAGCGGTTGCTTATGGAGATGAATGGCTTGGTAATGAATCAGTAGGGAAGAGGGAGAACGAGATAGCGGCCCTCCCCACTGGGAATCAGGCGGTCCCAACTGTAGAACCAGACTGGGACTACAACACAGCTAAAGGAAGATGGGATCAGAGTCATTTTGTTAGATGTATTCTTGAAGGACTTAGGCAGGCGCGTTCTAAGCCTTTAAACTATGGCAAATTGGCAGACATAGAACAGAAGGAGAAAGAAGCTCCTGGTACATTCCTAGATAGACTGAGAGAAGGCCTTCGCAGATTCACTGAGATTGATCCCGAAAGTGAAGAGGGAAAAGTGATCTTAAAGGATAGATTTCTCACTCAGTCGGCTCCAGATATCCGCTGTAAGCTATTAAAACAGGCGTATGGACCAAATCAGTCTTTAGATACTCTGTTACAACTGGCTCAGACAGTCTATTATGGTAGGGAATATGAGGAAAAGAAAGAAAGGCAAAAAAAGACAAAGGAAAAGGCGGAAGCCTTCGCCATGGCTATGAAAAACGTTCTTAAACAGCCTGAGAAAAATGCCCAGAGGGGCCCAGGTGAAAAGGGATGGGCTTGCTATTACTGTGGAAAGGAGGGGCACCTCAAGCGGGATTGCCCTCAGGCATCTAAGCCGCCCCCGGCTCCATGTCCAGTCTGCAAAGGACCACACTGGAAGAGAGACTGCCCCCAGAGGCGTAGGTCTCCGGGGTCAGACTCTCAAGACAATCAGGACTAAAGGTGCCCGGGGGTCCCCACACAAGCTCCCGTCCTAATTACACCTGAGGAACCCCGGGTTTTAATAGTTGTGGGGGGCCAATCCGTCGATTTCCTTTTAGATACTGGGGCAACTTATTCTGTCCTTACTGAAGTCCCTGGTCCACTTTCTTCCCGATCCGCTTCCGTAATGGGACTGTCTGGATGAGCCAAAAGGTATTATTTCAGTTATTCTTTATCTTGCAACTGGGATTCTGTGCTGTTTTCACACGAGTTTCTCATCGTGCCAGAATCTCCCTCACCCTTTTTGGGAAGGGATATACTGAGCAAGGTCCATGCCTCTGTTTTCATGAATATGGAGCCCTCCCTTTCTCTCCCTTTAGTTGAACAAAATGTAAATCCTAGAGTATGGGCTGATGGAAAATCTGTGGGTCGAGCACAAAATGCTATTCCTGTAGTTGTTAAGCTCAAAGACCCACACGTATTTCCACATAAGAAGCAGTATCCACTGAAACCTGAAGTTAAGGAAGGGTTAAAACCCATCATCGAAAATTTAAAGGAGCAGGGACTATTAATTCCCTGTAACAGTCCTTGCAACACTCCTATTTTGGGTATAAAGAAATCGAATGGTAAATGGAGACTAGTTCAAGATTTACGAATAATATATGAGGCTGTAGTTCCTTTACACCCCGTGGTGCCTAATCCTTATACTTTATTGTCTGAAATTCCTGAACGGGCCAAATATTTCTCAGTAATTGATTTAAAGGATGCCTTCTATTCAGTGCCTTTGGCGGAAGAAAGTCAATTCCTATTTGCCTTTGAAGACCCTACGCAGCCAGCTTCTCAGTTAACCTGGACAGTTTTGCCCCAGGGATTTCATGACAGTCCTCACTTATTCAGACAAAGTTTGTCACGGGATCTACAAAACTTTAATAGCTCTGAAGCAGTGGTGTTACAATATGTAGATGATATTTTGCTCTGTGCTGAGACAGAGGAAGCTTGTTCGCGAGCCTCAGAAGATTTCTTAAACTTTCTGGCAGACTGTGGTTACAAGGCATCAATGGAAAAGGCTCAGCTTTGTCAACAATCGGTTAGATATCTGGGCCTAATCATATCAGAAGGGACTAGGGCCATAGGCCCTGAGAGAATTAAACCTATACTAAATCACCCCCTACCTATGACTTTAAGACAATTAAGAGGATTTTTAGGAATCACAGGTTACTGTCGCATTTGGATTCCGGGTTACAGGGAACTTGCCTGGCCTTTATATAAACTTATAGCTGAAACTCAGCAGGCCCAAACCGACAAACTGGTTTGGTCTCCAGAAACTCAAAAGGCTTTTAAGGTTCTTCAGACTGCTCTCCTGCAAGCTCCAGCTCTGAGCTTGCCCACAGGGTCAGAATTTAATTTGTTTGTCACTGAAAGAAAAGGTGTGGCATTGGGAGTTTTGACACAACCCCGAGGGCCTCACCAGCAACCTATTGCTTATCTAAGCAGAGAATTAGATGTAGTTTCACGTGGGTGGCCCCACTGCCTAAGAGTAATTGGGGCAGCGGCTTTATTAGCACCTGAAGCTTTAAAAATAATTAATGGACGAAACCTTACTCTACTGACTTCTCATGATGTGAGTGGAATCTTAAATTCTAAGGTTAATATTTGGATGACAGACAGTAGGCTTCTTAAGTATCAGTCATTGTTGTTAGAAGGACCAGTAACTAAGCTTAAAGTTTGTGGAAATTTAAATCCTGCCACTTCCCTTCCTGAAAAGGAAAATGAAACACCTCATCACGATTGTTCTCAATTCCTAACTTTGAACTATGCAGCTCGGGAAGATCTAAAGGATACCCCATTAGACAATCCTGACATAGAAATATTTACAGATGGCAGTTCTTTTGTTCAGGATGGAAAGTGTAAAGCAGGTTACGCCGTGGTGACTGCTGAACAGGTTTTGGAAGCAAAATCTCTCCCCCAGGGAACCAGTGCTCTGTTAGCAGAGCTTGTGGCCCTGACCCGAGCTCTAGAGTTAAGCAAAGGGCAGCAGGTAAATATCTACACAGATTCTAAGTATGCTTATTTGACTTTACATGCTCATGCTGCAATATGGAAAGAGAGACACTTTAAAACAGCAACAGGAGAACCTATTAAGCATTTCAGAGAGATCGAGAGACTTTTAACTGCTATATATTGTCCTAAAGAAGTAGCTGTTATGCACTGCAAAGGGCACAGCAGGGATGGGAGTAAAATAGCCGAAGGTAATCATCTGGCTGACTGTCAAGCCAGAAAAGCGGCACTTTACGAAACCCCTTCACTACAGATGCCTTTGATCTGGACAGGTCCTGTGGAACAGGAAAGACCAAAACATACTGAGGAAGAATTAAAAAGATATAAGAAACGAGGAGCAAAGATTACTGATAAAGGATGGTTACAGTCTGAGGATGGACGATTAATAATTCCTGAAAATGCTCAGTGGAAAATTCTTAAGGGTTTACATCAGAGTTTTCATTTGGGTGCCGAGAGTACTTACCAAATGGTTTCTCGTTTGTTTGAAGGTAAAAATGTAATGAAAACTTTAAAGAATATTATCAAAAGGTGTGAGATTTGTCAAAAAAATAACCCAAAGACTGAAAAGCTAGCAAAATCTGGATTACAACGAAGTGGGAAGTATCCTGGAGAGGATTGGGAAATTGGTTTTACTCATATGCCAAAAGCTAATGGATATTCTTGCTTACAAGTTTGGGTAGATACCTTTACTGGATGGATTGAGGCTTTTCCCTGTCGTAGTGAACAGGCTAAGGAGGTTATAAAGATTTTAATCCATGAAATTATCCCCAGGTTTGGGCTGCCACGGAGCCTTCAGAGTGACAATGGCTCCGCCTTTAAAGCTGCTGTAACTCAGGGCGTGTCTAAAGCTCTAGGAATGGAATATCACTTACACTGTTCCTGGAGACCCCAATCCTCCGGGAAAGTTGAAAAAGCTAATGACATTATCAAAAGGCATCTGCGCAAATTAACTCAAGAGACGCAGGACAAATGGATTAAAGTCCTACCCATAGCTTTAATGAGGGCTCGAACTACCCCCCAAAAGGAGGGACTGTCCCCCTTTGAATGTATTTATGGAAGGCCTTTCTTACGCACAGACATTGTTATAGACCCTGAAGCCTTGGAATTAACTAATTATGTAACTCAGCTCTCAGCTTTTCAACAGGCATTAACAGAACTCGGGGAGACGACTCCTGACCCAGCCTCCCAGCCTCCGAGACAAGCAAGCCTCTATTTGAGCCAGGAACCAAGGTCCTCATAAAAACATTGGGATCTGGGGGCCCATCCCTCGAGCCTCTCTGGGAAGGTCCTTACAAGGTTATTCTTTCCTCTCCCACAGCTGTCAAAGTGCCAGGAATTGATTCGTGGGTACATCATACTCGAGTTAAGAGGTGGCACCCTGACCAAAATTAAGTGACTTCATTTTATGTCTTTACTTTCTATGCTCTGACTTTGTACCTTTTAGATGGGCCTGATAACCTATGTGAGCTTACTTCTGCTGACTCCAAATATCCTGAGTCTGCCGTTGGATCCTCAAGACAATGTCTTCCTGTCCTGGGCTCACTCCTATGCTGCATTCCACAATCGGTCTAACTGCTGGGTCTGCCGAGCGCTCCCCTCTTCGTCAGTGGAAGGCTTCCTGTGGTGGACCTCCCCACTTCCAGGAAAAGACTTTCTCCAAGTCTGTGAATACCTTCGACAACAATCACATGTGATGCCTCTTCTTCATCTGATGACATCTACCAACCCTAAAATGGACTGGTGCAACACTTTGTACTCTAACTATGGACATAATGTGACTTTTAATTTTGATTATACATTGCTCGGTTCAATGACTATTTTGCTACATATAAGATAAATAGGTCTAGATCTAATGGTTTTTTACCTGACGTTTATCAAACATGGGATGAGGTTACATGGCTAACTCCTGAAAAAGGACGTTTAATATCTACTGCCTCTATATGCTGGGAACAAACAGAGCCGTCCCCAAAAGTTAGCCAACAACTTAATTACAATGATTGGAAACAAGTGGGATATTTGTCTCAGGAAACATGCAATGTAATCATTCCCGTGTTTTCCAATCCCAGTTCAGGTTCTCCCTTTGTCTGGCCAGGCACGAATTGGGACTGGATATCTCAGTCGCACTGGCTTGCTCCAAACGGGACTTATTGGATATGTGGCTCTTACCTATGGACATGGCTTCCCCCTGGTTGGATAGGGAGATGCACCCTGGGTCTAGCCTTTACTCATGGCTTTATATTTTCAGAGCTTCCAGAAAAGCCTGCTAATTTACCCCACCTTAAAACTCGGTGGGCAAGGTCTGTATTTCATTGGTATGATTATTTGGCTGCAGCGTTTGTTCCCTCTTTGGGAACTACAGATGTTATGTTACGAGTGGATGCTTTGACTAATTTTACTCAACAGGCATTACAAGATTCTCAAAAGGCTATTTCAGCTCTTAATGCTGAACAAGCACAAATTAGAAAGGTGGTTTTACAAAACAGATTGGCTCTAGATATTCTGACAGCTGCACAGGGAGGAACTTGTGCCATTATTCATACCCAATGCTGTACATATATACCTGATATGAGCACGAATGTTACCCATTTTACTAACCACATGAACAAGATGATTAGGGCCATGGACACTCCTGAAGCCTCAATTGCTTCACTTTGGGAAACGTTAACTAGTTCCCCATGGTGGACAACTATCTTAATTACAATAATTCTGGTTGTTTTGTTCTTGCTGTTTGCTCCCTGCATCTGTAATTGTATAACTGGATTTGTTTCTAGCCACATGAAAGCTTTTAAATTACAAATGGTTGCTCAAACTCCTGCTACTGCTGTAGCTTCCTCCAGCTACTATTTGGGGCCCCTGGATCAGATATCCTCAATATGAGGATTAGGAGAATATGTTGCCTCACCAATTTAGGGACAACGCCCCTTGTCAGCTCGGAAGTAGTTATGGAATGAGAACGACGCCCCTTTTCCCTAGGCAACATAATTCTCCTAAAAGAAAAGGGGGGAATGAGACAGTCATTTCCTAGGCAGGTTGATAGGAAATCTAGGGGTCCCCAAGGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTCACAGTCTTTGTAGACCAGGACCTGGGGACTGGAGTCGATGAAAATGAGAGGGTAACAGGCAGGAAGGCCAAGGGTCTCCAAATGGAGGAAATAGCCTGCAAGTGTCAGACATTTTTCTCTCTCTTAAGCGGCAGGAGGAAACAAACTAGCAATATTTTTTTCCTTCTCTATACAAATTTAAAGGGAGGTTTCTCTTAAAATACTGTGTTGCCATATGACACCTGGTTTCGCCTAGAGATAACCAATGCCTTTTTCTTATGGAAATGTTTGTCTTAAGCTATGCTAATGTGCTATGCCTTTACCCCAAACTCTATCTCCAAGTCGGTTCCGCCTCCTGGCCCAGAACCTACTTGACAAACCAGTATGTTATACTCAGATATTGTTCCCCTAATCTATGTAAATGAAACTATTTGTATGGTGGTCTGCCCTTCTTCAAGATTCAAGTTAATCATTTTATGGCCCAGGATAAACCATTTGGTGCCAAGGTTATCCCAAAATGCATCTTATGGGTGAGGGGCCTGGTGCCATTCTGAAATTTAAGACATTCCTTTCTTTCATTAACAGACTGCTAGTGACTGTTTAACATCCAGCTGAAGACTAGCAGGGGGGTACTCTTTCTGCCCCCTTCTGATGCCTATGTCAGAAGCTTTCTCTATTTCCTTTATACTTTAATAAAACTTTATTACACAAAAGCTCTGAGCGATCAAGCCTCGTCTCTGGCCCCGGATTGAATTCTTCTCCGGGGGCCAAGAATCCCAGTGTATTCGCGTGATTCAACAACCACCTTTCAGCCGGATCCTCAACCGATTGAATGCTCTCCCACACATATGAAACCATTAATTCATGACCTGAAGCTGTTCTGTATCTCCTCACACTTCTGCCTACAATTTTTATCTCAGTTCCTTTCTTCTTTATCATTTTAGGAGAAATAGCTAATTAATATGCTTTTTGAAATATTTTTTGAAACTATAAAATGTCACATAAATGTTCAATCCCACAGTGTTTTATGATGCATCTTTGATTAACTTCAAGGCACCAGCATTAATTCCTACATTTATTTCCCTCTCTTGCCTTCTGGCGTCTGTTCTAAAAGCCTTCTTGCTACTTCCTCCAGCCTCTGCCTTTCAGAGCAATTGCCTGCATTGAAGCACAGCTTTTCTCTCTAATTCTCTTTTAGAAACTCGGTTGTCTTTTTGAAGGTAAATGAAATTCTATTAAAATAGAGAAAATGAAATGCTGACACTTACTGAAATAACTGTGGCTCTCACTTGGCTGGAGTATTTCAAATCCCCAAAGAGATGAAAGAAAATTTCCCATTTGACATCCTTTCCTGTATTAGAAGCCCCAAATCCGTCTTCCCTGAGCATGAATATGAAAAAAACAACAAAAAAGACATTCACTGAGTTACTCACATATCCTCCAAGACTATCTGAAATAAATCCAATCTGATGGGAAAAGACAGTCTACAAGATGAATAGCATTACCTTCTCATCTGGCTTGGGATCAGAAAGTGGGTATGGGTACTGTGCTCCTTGGCCAGAATCGTGCTTTTGAGCTTTGCTGCTGCCAGGAGAGACAACCCCCTCCTGGGAGCCCAGGTATTTGGGTTTTGAATCAGTTCTGCTTTTAAGTTGCTCTGTGACTTGGGCAATTCATTTCAATGAATCCCTGCAAAGTTCTTCTCCTCCAGGGCTCCCTATCTTAGCATCTGCTACTGCCATGCTACCTGAGGGATATGCCAGAACCCAGAATTATCCTTGACTCCTCTTCCCTCAGGCCCTACATCCCATCACTGTCTAAGCCATCTCATCCAC TCONS_00206283 TCONS_00206284 . 3' 6026 TCONS_00206283 TCONS_00206284 . 3' 16505 EMBV3_04499 TGTATGGTGAACTGGAGGCGCCCTCTCTTCCTCACAGAACACCGGAAGATACTCCGAGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37706 TGAAGAGTCACAGTTTGAGATGGACATTTAAAGGGCCAGCCATCGGAGCGAGCCATGCCT Gene GeneID:509613|EIF4EBP1:NM_001077893:47_cdna Constitutive 1 NULL GeneID:509613 27 GENE EIF4EBP1 NULL eukaryotic translation initiation factor 4E binding protein 1 EMBV3_07097 AATGGCACACTGATTCACCCAGAAGACATTTCCAGCAGTTCGCCAGTGGTTCCTCACTAC Gene GeneID:508465|DERL2:XM_002695769:252_cdna Constitutive 2 NULL GeneID:508465 19 GENE DERL2 MGC127058 Der1-like domain family, member 2 EMBV3_14491 GTCTTCATAGCCCCATCAGAGCTGAGATACTTCGTGAAGGACATCCTCGGCTGCGTCTGT Gene GeneID:514793|POLA2:NM_001024542:3_cdna Constitutive 0 NULL GeneID:514793 29 GENE POLA2 NULL polymerase (DNA directed), alpha 2 (70kD subunit) EMBV3_28464 GCCTGAAGCACTATCAACAAAGGTTCATAACATTGCACAGGAGGAAGTGATCAAAACCAC Gene BVV0102_042207 + 1 EMBV3_15427 GK000030.2:78974556-79070548 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13242 GATGCGGGTGGGCAGGACCTGCAGGCCCAGCTCTTATTAAAGGTGCTGGAAGTTCTGGAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08760 CTGTGGACCCTTCTTCTTGTACTAGTGGTGGTGTGGGACAGTCGGAGTTTGCTGTCGCCG Variant GeneID:511673|MMAA:NM_001100342:7_cdna 629^799 1 EMBV3_33914 GeneID:511673 17 GENE MMAA NULL methylmalonic aciduria (cobalamin deficiency) cblA type EMBV3_06365 ACAGACCGCTGAGGGGATGGTGCCTGACCCACTTTGAGGGGAGCACAGAGACAGGAATAA Gene BVT0102_130855 + 0 NULL GK000019.2:57205107-57238645 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42661 CAGTTGCTGTCTCGTGGTTTGAAGAAAAGCAGCACTATTTACTTTTCCAGCTGAATCCAG Gene GeneID:532940|CCDC28A:XM_002690280:37_cdna Constitutive 2 NULL GeneID:532940 9 GENE CCDC28A NULL coiled-coil domain containing 28A EMBV3_39656 CACCAAGCCCATGCTCACCCCTCCTTAGTTTGCACAATTCTGTCTTCCGAGATTCCAGCA Gene BVV0102_343983 + 0 NULL GK000011.2:89352644-89874948 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028734 TCONS_00028736 TCONS_00028735 TCONS_00028732 TCONS_00028733 1 XLOC_015565 Coding TCONS_00028734 XLOC_015565 Coding Coding RNF144A 11:89871052-89967390 j TSS20121 5191 2 TCONS_00028734_6 223 8 0.946199279612195 2.14860331790671e-12 2.62471507850432e-17 9.71041108148591e-17 0 0 0 1.79668728293934e-05 0 1.04119647594607e-15 4.36467599581182e-18 3.23461884507387e-06 5.4987664692541e-19 0 2.03264272309447e-18 0 0.00288290348886499 3.38920574221052e-12 0.00126818094530168 0 0 0 0.00224222409302087 0.000641258215266594 0.000757935701440896 3.97763842410337e-14 4.21336721413137e-17 8.37806884447173e-16 0.000204340388492248 0.000298435833882963 1.9697699954542e-05 XM_005193951.1 RNF144A PREDICTED: Bos taurus ring finger protein 144A (RNF144A), 0.0 9317 99.64 0.999229435561549 NM_014746.3 RNF144A Homo sapiens ring finger protein 144A (RNF144A), mRNA. 0.0 1838 72.29 0.672124831439029 TCONS_00028734_3 sp|Q925F3|R144A_MOUSE R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A; 2e-147 417 95.22 0.995215311004785 1 coding 0 0 0 0 0.0260634131930708 0.878249714691941 -0.00752384167171574 0.888745076380525 GGTCAGCATTCGGCGGAGTCTGGTGTTGTCCCCATCCCCCAGGTCTGCAGGGACCCCAGTGCCAGAGACCTCCTCCCCCTTCTCCAGGAGGGCGTCCTGTCATGAGAGGGCGAGCCAGCTGAGCCTCCGGGGACCCTGGAATTTGGCCGGAAGACCGTTCCTCTCCTCCCATTAGGACATTTCAGAGACTGCTCTGCCATGAGCGCTGCGCGCGCGTGCCGGCCATCCTGGGACTTGGCCCTGGACCCACTGGTGTCCTGCAAGCTGTGTCTGGGGGAGTACCCTGTGGAGCAGATGACGACCATCGCCCAGTGCCATGCCTGAAACAGTATGTGGAGCTCTTGATCAAAGAAGGATTAGAAACTGCGATTAGCTGTCCAGATGCTGCCTGCCCCAAACAGGGCCACCTGCAGGAGAACGAGATTGAGTGCATGGTGGCGGCTGAAATTATGCAAAGATACAAGAAGCTACAGTTTGAAAGAGAGGTGCTCCTGGACCCCTGTCGGACTTGGTGCCCGGCGTCTACGTGCCAGGCGGTGTGCCAACTCCAGGAGATGGGGCTGCACACCCCCCAGCTGGTCCAGTGCAAAGCCTGTGACACGGAGTTCTGTTCTGCCTGCAAAGCCAGCTGGCACCCTGGCCAGGGTTGCCCGGAGACCATGCCCATCACCTTCCTTCCCGGGGAGACCAGCTCTGCTTTCAAGCTGGACGAGGACGACGCACCAATCAAGCGCTGCCCCAAGTGCAAGGTCTACATCGAGCGGGACGAAGGCTGTGCCCAGATGATGTGTAAGAACTGCAAACACGCCTTCTGCTGGTACTGCCTCGAGTCCCTGGATGACGACTTCCTCCTGATCCATTATGATAAAGGGCCCTGCAGGAACAAGCTGGGCCACTCCAGGGCGTCTGTCATCTGGCATCGGACACAGGTCGTGGGCATCTTTGCTGGATTTGGGCTCCTGCTCCTGGTGGCCTCCCCTTTCCTGCTCCTGGCCACTCCGTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCTCTGCCCACCTAGAGAATGGTGCGATGCTGGAGCAGGACCCCCGCCTGCGGGAAGCGTGGTTCCCCCACCCCACCCCGCTGTCCCCCTCTCACTAAACATCTCTCTTGCCTTATGTGCCCCATTGAGCTTCACAGTGTCACGCCAGGACGCCGTGATTACAGGGACTGATGTCAGGTCGTCGGCCGAGGCCCCAGGTGTGGTCACCCCCGGCATGGGGGAGGCAAGGCTGGCGTGGGTGGGGCGCGTCGCACAGGGTGGGTCTCTGCAGACTCACCGAGGGAGGTGCTGTGCGGAGCGCCCCCCACCCCGGCGACGTTCTCCCTGTCCCGCTGGACCGGGACCCTCCGATGTTGCCCAGGGGACTTTGTCATGCAGAGTGCAGTCTGTCTCCTCCCTGGCTTCGAGCTGGCGCCTCCTCGTGGCTGAGAGAAGTCCTTTAAGGATCGCGTTCCACTTCAGACAGAATCCGAGTGTTCTGACTTGAGAAAAGCACTCTGTTTATGACAACTCTTTTTATTACTAATGGCATTTAGTAAAATCCTTTTTAGAAGGCGTTTCCCCACACCGCCCCCCCACCCCCAACCGAGTAGTGAAAAATCAACACGGTGCATCAAAACCATTGTATGCCTTCTCTTGAGATGTGCGATTTTAAGAAGTTATGGTTAAATGGCCTTTCTGGCTCGGCCACTTTGCAGGAGATTTAGGAAGCCTTGTGTGCTCTTTGTGTCTTTTCTTGACGCTTGTGGAGACTTTTGGGATTGCTGTACGCTGTATACTGTTATCAGCGTGTTTCCCGTGTCTTTAAACAGTTGCATTTCTTTAAACATACCGATGCATTTAAAGGAACATCTCCCCCCTAGGTTTGCCTTTTGTTTTCCTCTCTCTGGTGATTCAACTCGACTCACAGGGCTCCTCTCTGTTCACCCAAGGATCAGCAAATATTTTTTCATGTCTTCAGAAACCAAATGTTTTACTTGGTAATAGTTTTGTCGAGAATCCCTGTGGTTTGGCTGCAGCGTCAGTCCCCTCAAGCAGATGAAACCAATCAAATAGTGACCCTGAAGTCCGGGGGAAGGGCTTACTGGCAGGGGGCTGGGGCACAAGCTTCTGGATGTTCAGTTTTTGAAATGACTGAGTTATTCTGGAGAAATCATCTCTCTTACACAGTTCCAAGTCTCGCTGCTTACCCTACTGCCCCTGCTGAAAAAAATCTTCCGCTTCACTGAGTTGTTTTGATTGAGGGGGTATTACCACTCGATCTTTTACAGCTGTGTGTGACCGTGACCAGGGCAGGCGGATGCCCGGATCAGTAACACATACCGGGCTCCATAAGTTAACTCTGGGCAATGTGTGCTTTACAGACAGTGGACTTTACTGTGGCTTTTAAAGAGCACGCTGATTTCATCCAGCTTAGGACTTCTAAACACAGTAGGCGATCGTTGTGGATTTATCATGGTGGAACTTTTTAAAACTTATTAAGCATTCCACGAAAGAGTAAAATGAAAATGAAGTCTTTTATCTCTGCTGTTTGCCTATGTCAGGCACATTTGTACAGCGTGGTGGTGTTTTGTATCCTTGACTTCTGCGTTTGTGTATCCATCTCAGGTCCTCGATTACCTTCTGGTAGAGAAATGACTTTTATTTGTTAACATTTAATCAGCTTAGGAGAAACAGGATCACTCTTTCGCTCTAGGATTCATTTTCTTTTTGAAACTGAAGCCATTTTAAGGAGCCAGTCTGTGTCAAAATTATGTGCAGAACAGCCTCCAATATAACTACAGTTTGAAAACTCACTAACGATAAGAACATGCCCGGGGCCATCTGCCTGGATGAAGCCGGGGCACTGAGTCTCTGTAGCTGGAGGTGCTGCCATCAGGGTCAGGCCTGGGGGTGGGGAATGGCTTTTCTGGAGAGAGCGACAGCGCCCTGGGCCTGAAGATGAGCTTGGTGGCCCAGGCTTGAGAGCTCACTGCAATTTGTGAATGCCCTTTAAAGTCCTCATGGAAGACAGCAGGCTCGCGGCCTGTGTCCAGTGGTCCACGGGGCAAAGCTCCCCATCCCAGGTCAGCCTGTCTGTACTTGCTGCTGCCCATCGCCTCCAGGGGTCCAGGCAGTAGTGCCCCTTCCTTCAAGGTGGGGACCAGAGCTGTTGGAAACGCCCCCTTCCCTGGGCCAGAGCTCAGGCCCTTTCATTCCTAGCAGGCTGGGCCGCCTGTTCTCCTGGGGGAGTCCACGGGTAGACCGTGCACACCCAGAGCCCCTGCCAGCCCTTTGCCTTTAGCCCTGATAGTTCAACGCACATGGTGCGACCCAGGTAGGACACACCGGGATTCTGGGGTCACCCAGGGTCTGAGTCACATCTGCTTGCTCTGAGTTTTTACATCAAGCCTGCCTGAGAGTGGTCGGTGTGATCAGGAAAAGCAAAAATAAAGCTGTCTGTTCGCTAGAAAGACACCAGCAGGGTCTCGTTGAGATCCTTTCGGAGACATGCAGCATCACCATCCGACTCCTCTCCTTTCAGCGAGGAACGCCATCCCTGTTGTTCGTGGGGACGCAGGATGGACTGGGCCTGATGTCAGGTGTGCACAGGACGTGGGAAGATGGCCCGTGTTGTGGGTTCTGACCTTGCCATCACTCCCAGGAAAGCCTGGGTGTTTGACACTGTGGATGTGGTTGTAATTGAAGATGACCTTTGACAGGTGGTGTTCACACTGACCCTGTGGAAGCACACGTCTGTTGATTCATTTAGAGGCCTTTAATTCTGGAGGGGGTGGGGAGGGGAAGGAGAACACAGAGATGGACCGTGGCTGAGTGCCCCTGGCCAGGTGGGGGTGACGGAGGGTGTGGTAATATGAGTCCTTTGGGAACGGACGGCGCAGTGAGGTTTCACTGGCCATGCCTGGGCTCTGAGCCTGGCTCCACCCTGCGTCCTGTAGCCTGGCCAGCCCAGCTTTACCATCGTCACCGAGGACCAGCGCCTTCAGGGGCATCGTTGTAGATGATCACTCAGCAGAGACCGACCCAGGACCTGAGCATAAAGAGAACATTTTAAGGCCCGAATGCTGGCCCATCAGTGTTTCCTCCACCCCCGGGGGGAGCTAAGGAACCACGTCTGCTCCCTCTGGCATCTTTTTAAAGGGGAACAGATTCTCTTTACAGCATACTGTTTCTTAAAACCAGTTTAAGAACCAGACCAATTCCTGATTAGCACATAGGACCCGGGGAAAGGGGCTTATCAGATATGCAGAAATTACTCCAAGATGATTTTATCTTTCTCACCTGTTTTCCAAAAGTTACAAATTATTTTGCAAATTAGAAGAGAGTATTTTCCCTTGGTTGTCTTTAAAAATAAGAGTACTGGAAAGAACCAGGGTGGGTTTTTTTTTTGGTCTATTTCTCAGATTCTCATTGATTAATAAATACCTGTCTATGTATATATAAATCACAGTGAAATCATCAAGAGAAAACATTTGCATGTATAAAGCTTCCTGAAGGTCTCTCAAAAATACCAAAGCTTGTTTATTCCTTATCATTAACCCAAGCCCTTATGAAAGGAAACAAAATGAAGAGTTGTGACTGGTGTTATCAAAAAATGCCAGCTGGAAAGAAGGGGGTGCATGAAAGCAGAATGACTGCTGCGTCCCGACCCGGAGAGCCTGCTGTTTGGGGGCACCAAGCCCATGCTCACCCCTCCTTAGTTTGCACAATTCTGTCTTCCGAGATTCCAGCAGCCTTCAGGGAGGGGTAGGTACCCAACCTTTCCCTCATCTCGTGCTCATTTTACCATGGGTGTATTCTACTCTTGTGTAAGAACATGCATGAATGAGTCATGCACATGTATACATTATGCATTTGACAAGTGGTGGTAAAAACAAACAAAAAAAAAACCAAAACAAGTTTGGTTCGTGTTTCTGAAATGTCAGTACATTTCGTGCCACTCACACTGTGATGTATAAAAGAGCTGTTCGAACGCCTTTTAATGTCGTGTTTTGTACTTTGGAATCGTATAGACAAGTTTGATTTGTAATTTCAATACATATTTTAAGTGTATTGTGTCTTATGTAGTTTGTCCCCCACCCCTTTCGAAGGGATTTCTTTTTAAAGATATTTTGGCTGGAATACAGGTTACTTTTGTAAATCCT EMBV3_02249 CATCGTGGTGGTCATTTCCTTCATCCTCGACCTCGTCCTCCTGTTCCGGGAGCATCAATT Gene GeneID:616570|HVCN1:XM_002694497:373_cdna Constitutive 0 NULL GeneID:616570 17 GENE HVCN1 NULL hydrogen voltage-gated channel 1 EMBV3_35396 ATAATCACTGCAGAATCAATCTTCTACAAGGACCAGAGGAGGATCTTCCAAGGAAGATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10362 TCTCATGCGTGCAGAAGGTACTAATGGAAACTCACGTGGCCTTGCAAACCCTGCTTCTCG Gene GeneID:534475|RFX2:NM_001102172:69_cdna Constitutive 2 NULL GeneID:534475 7 GENE RFX2 MGC148739 regulatory factor X, 2 (influences HLA class II expression) EMBV3_31719 AGGAAGCAGCGGAATTTCAGGCAGAGTTTGTGATCCTGCCTCACATTGGCAGTGCCACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25515 AGCCTCAGTTTCCACTACTGTGTAGACGCCTGCTTCTCTAAGAACCTGCCAATTCTTGAC Gene GeneID:503580|FOXA2:XM_002692160:190_cdna Constitutive 0 NULL GeneID:503580 13 GENE FOXA2 HNF-3b forkhead box A2 EMBV3_31305 ACTAGTGGCCAAGAGGCTGTGTGAGATGGTTCTTGCCAAAGGAACAGGGTGTGATGTGCT Gene GeneID:517541|ADAM17:XM_002691486:380_cdna UTR3_Alt 2 NULL GeneID:517541 11 GENE ADAM17 NULL ADAM metallopeptidase domain 17 EMBV3_40737 GACTTGCAGTACGTGGAGAAGATGGAGAACCAGATGAAAGGGCTGGAGTCCAAGTTCAGA Gene GeneID:507002|OLFM1:NM_001101879:26_cdna Constitutive 0 NULL GeneID:507002 11 GENE OLFM1 MGC148570 olfactomedin 1 EMBV3_39040 TTGAAAAAGCTGCAAACCCAAGTGGCAAGAAGAAACTCAAGATATTCCAGCCCGTCGTGG Gene GeneID:519826|DIDO1:NM_001075794:1135_cdna UTR3_Alt 2 NULL GeneID:519826 13 GENE DIDO1 MGC137821 death inducer-obliterator 1 EMBV3_02156 TGCAGCCCCAAAGGTGAGAAAACATTACCTGCTTTTCCTGTCCGAGCCCCCCGCCCCTGA Gene BVT0102_110027 + 0 NULL GK000021.2:58176320-58181939 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00121725 TCONS_00121728 TCONS_00121726 TCONS_00121727 1 XLOC_073461 Coding TCONS_00121725 XLOC_073461 Coding Coding ITPK1 21:58180539-58315704 j TSS90600 3036 1 TCONS_00121725_2 300 10 0.977612381995206 0.00461693092735704 0.00120253950878285 0.00130701990382809 0.00113175297541896 0.00146516319699675 0.000190722264578348 0.00140965340860241 0.00248233805424206 0.00226389961379211 9.88485994139083e-05 0.000793681992061342 0.000411905211767405 0.00023557032407735 0.000632550175936818 0.000321842981541694 0.0064364781503663 0.00455506037420838 0.00748518104394546 0.00196952737156053 0.000844501978692608 0.000866548510784398 0.00301655785705839 0.00222594279017532 0.00183384983863204 0.000930634070240584 0.00037662589421382 0.00218835336807517 0.000467825893988825 0.000403082873124497 0.00109885588567453 XM_005222198.1 ITPK1 PREDICTED: Bos taurus inositol-tetrakisphosphate 1-kinase (ITPK1), 0.0 5286 100.00 0.965085638998682 NM_001142593.1 ITPK1 Homo sapiens inositol-tetrakisphosphate 1-kinase (ITPK1), 0.0 1826 87.00 0.492753623188406 TCONS_00121725_2 sp|P0C0T1|ITPK1_BOVIN ITPK1_BOVIN Inositol-tetrakisphosphate 1-kinase; 0.0 622 100.00 0.996666666666667 1 coding 0 0 0 0 -0.0542311868897264 0.823681034054378 0.0105242098414555 0.846259109386881 CTTCCTGGAGGTGTGGAAAGGAAGCGAGGCATAGAAGTCGTGCAGCTGAACCTGAGCCGGCCGATCGAGGAGCAGGGCCCCCTGGACGTCATCATCCACAAGCTGACCGATGTCATCCTCGAAGCTGATCAGAATGACAGCCAGGCCCTGGAGCTGGTGCACAGGTTCCAGGAATACATTGATGCCCACCCGGAGACCATTGTCCTGGACCCTCTTCCTGCCATCAGGACCCTGCTTGACCGGTCCAAGTCCTATGAGCTCATCCGGAAGATCGAGGCCTACATGAAAGATGACAGGATCTGCTCGCCACCCTTCATGGAGCTCACGAGCCTGTGCGGGGATGACACCATGAGACTCCTGGAGGAGAATGGCCTGGCCTTCCCATTCATTTGCAAAACCAGAGTGGCTCATGGCACCAACTCTCACGAGATGGCCATCGTGTTCAACCAGGAGGGCCTGAGCGCCATCCAGCCGCCCTGCGTGGTCCAGAATTTCATCAACCACAATGCTGTCCTGTACAAGGTGTTTGTGGTTGGCGAGTCCTACACCGTGGTCCAGCGGCCCTCGCTGAAGAACTTCTCCGCGGGCACGTCAGACCGCGAGTCCATCTTCTTCAACAGCCACAACGTGTCGAAGCCAGAGTCCTCGTCGGTCCTGACTGCGCTGGACAAGATCGAGGGTGTGTTCGAGCGGCCAAGCGACGAGGTCATCCGGGAGCTGTCGCGGGCCCTGCGGCAGGCGCTGGGCGTGTCTCTCTTTGGGATCGACATCATCATCAACAACCAGACGGGGCAGCATGCCGTCATCGACATCAACGCCTTCCCCGGCTACGAGGGTGTAAGCGAGTTCTTCACCGACCTCCTGAACCACATCGCCAGCGTGCTGCAGGGCCAGAGCTCGGGCGTGGCGGGTGCTGGGGACGTGGCCCCACTGAAGCACAGCAGGCTCCTGGCGGAGCAGGCGGGCGGCCTGGCGGCCGAGCGGACGTGCAGCGCCAGCCCCGGCTGCTGCAGCAGCATGATGGGCCAGGAGCCGCCCTGGACGCCCGAGGCCGACATGGGCGGCGTGGGCGCTGGCAGCACTGCCAAGCTGCCGCACCAGAGACTCGGCTGTACCGCCGGCGTGTCGCCCAGCTTCCAGCAGCACTGCGTGGCCTCGCTGGCCACTAAGGCCTCCTCCCAGTAGCCTCGGAGCCCGGGACCCAGAGAGACGGCGCGGGCCGCAGAGCGCGGCCGCTGGGCGAGCAGCTCCCGACGACGGTGACGCTACTACTAAGGATTCCCAACGATCTGATTCTTCTTCTTCTACTTCTTTTTTTCTTAATTTTTAACCTGATTTTCTGATGTCATGATCTAAATGAGGGGTGGGGGTGGGGATGGAAAGGAACCCCAAGTGGTCCAGCCTTGCGGCAAAGGGACGATCCCTCCTGGTTCCTGCTGTGCAGATGTCTTCACCGAGTTTACACATGCTGTGTTTTCAACACTAGGTCTGAATGTGAGGTGGGGCGTGCGTGTGTGTGGTTGTGTCTGTGTATGTGTGTGTGAGTGCCTGGGTACGCCCACGTCTGTCTTTCTCAATGGCTGCTGTGGGCCAGGCCTCGGGGACCTTGGAGCAGGCTGTCCCGGGTCAGGTTGTTGGTGGCTGAGCAGAGAGTAAACAGTTCCCAGTCTCTTCCCTCCTGGCCCCTGCACCCCGGCCCAGCCCGTTGCTCTTACTCATGGCCTCAAGCCCCACCAGGTGTGCAGCTGCCCCTCCCAAAAGCATGACCCCGAGGAAGCCAGAGGCCTCAGCTTCCCTTTCCTTGGGGAAGTCCATGCAGCGGGTCTGAGCTGGGATCCACCTGCTGCCGCTCATGAAAGGCAAGGAGGAGGACGCTTCTCCAGGAAGGCCGCAGCCCCGGGCTGGCTGCCTCTCTCCACGTCCCGCTCCCCGGAGTCCACTGGGCCTGTCAACACATGTCCTGTGCCGCCATGCAAAGGGTCCGCCCGTCCCTGACCAGGGTCGCCGCTCCCCGGACCTGGGAGAAGGCTGCCCAGCCCAGAGCCTCTGGGCTGATCCTGCCTATGCCAAGGATTTGTGCTGTGACTTTGGGCAAATCATTCCAAGAGTCGCTGGGCACTCACGACCAGAGAAGTCAAGGGCAGGCTCAACGCCCTACCCCTGTGACGCAGCCTGTCCCTCTGTGAAGCCCACCCAGATGAGCCTCCCCTTGGCATCCAGGCGATCGGTGGGGGCCCTCTTCCCAGGCCGGACGAGGCTGCGGCTGCTCCACGCCTGCCCAGAAGGCCTGATCCACACCCCTCCCGTGTTCACTGCCCACCCCAAGCACTGAGCCAGCCAGGTGTGAGCAGGCTGCAGCCCCAAAGGTGAGAAAACATTACCTGCTTTTCCTGTCCGAGCCCCCCGCCCCTGAGGGCAGCAGACCAACCAACCACTGGCTAATAAGTCCAGTTCCACAGTCCAGGTGGGCAGGCGGCCCCAGGGGGCCAGTGAGGGGCTTGGTCAGCCTTCTGCCAGTGTGACCACCCGGCAGGAAACAGCAGACCCCCCTGAAGCATGAGCACGTGTCTTCAGATATCAGGCACTCGGAGGGAGGGGAACAGGCCTCGGGGCCGTCCTGCGAGGTCCAGGGAGGGCGCCACAGAAGAAGCTGCTGCGCTGGGCATTCGGAGGCACCTTCAGGCCTGGCCAGCGGGGAGGTGGGGGTCGCCTGCCTCTGGGAGAGGAAGGGCTGGGGTGAGGGGCGCTGCCCTCAGAACTGGCCGGCTTGTCCTAGAAACCAAGGGCCCGCCGACATCCGTGTTTACACGACTTGAGTGTTGAACCCCAATTATAATGTCTGTACGTCGCCTTTCCTCGTCTGGCCCCCGAGCTCCGGGGGAAGCAGGAAGCGTGGCCGGCCTCTTGCACTGCTTTGTCTCCAAAATAAACTACTGAAATCAAACTGCATTTCACACGTGTTTACAAAACATTGCTGAACATTTCTGTCCTCCTGCTGTCTTTTAATAAAACAACTTTACCTTTTGGAATAAAATT EMBV3_09481 AGGTGCAGCTTTAGAGATTCCACACAAGGACTATTAGCATGGAGCCCAGTGTGTCCTGTA Gene BVT0102_082896 - 0 NULL GK000011.2:39922614-40548043 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00330 AGCATCAAAATGCCAGGCAGGCTGGGCTCCCAAAGGCTCCTTTTTCAAGACCTCTGGAAG Gene GeneID:781731|EIF4E2:XM_002688260:182_cdna Constitutive 0 NULL GeneID:781731 6 GENE EIF4E2 NULL eukaryotic translation initiation factor 4E family member 2 EMBV3_39834 GGAAACCCAACACATCCCTATTGTGGTCTCTCAGGCACTTTGACCATGTCTTAACCTGCC Gene GeneID:529282|COQ9:NM_001046302:321_cdna Constitutive 0 NULL GeneID:529282 18 GENE COQ9 MGC134146 coenzyme Q9 homolog (S. cerevisiae) EMBV3_22421 AACCATAGAAGGTATGCTCTGCGTCGTCTGCCCTGTAATGTGGCATTTAATAGTGTCAGG Gene GeneID:534013|TMEM68:NM_001076009:41_cdna Constitutive 1 NULL GeneID:534013 14 GENE TMEM68 MGC140559 transmembrane protein 68 EMBV3_20714 CAGGGCACATTAACACTGCTGAACTGCACCAGCAAGGGTAAAGGAAGAAAACCACCTTCC Gene GeneID:280827|IL7:NM_173924:251_cdna Constitutive 0 NULL GeneID:280827 14 GENE IL7 MGC152606 interleukin 7 EMBV3_18097 ATCTACAGTCTTGAGAAGCACTTTGAGCAGATGGTCGCCTGGGTTTTCCAAGGAGGTGTG Gene GeneID:539858|RB1CC1:NM_001114155:44_cdna UTR3_Alt 2 NULL GeneID:539858 14 GENE RB1CC1 KIAA0203 RB1-inducible coiled-coil 1 EMBV3_00446 TTGCACAATTGCCACACAGCCACTGTTGCCCTGAGCCAGAAAGGTTTGATCTATTGAGTC Gene BVT0102_059284 + 1 EMBV3_42556 GK000026.2:46366459-46758606 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26628 GTTGGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCATCATCGCTGGGACACTCTGCTGA Gene GeneID:100297754|LOC100297754:XM_002691259:273_cdna Constitutive 0 NULL GeneID:100297754 11 GENE LOC100297754 NULL hypothetical protein LOC100297754 EMBV3_30525 AGGCCTAAAGAGCATTTTGCTGTCTCTTGGAAACCTGCCCAACCACCAAAAAAACAAGCC Gene BVV0102_110533 + 1 EMBV3_21182 GK000013.2:51809476-51837800 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24461 ACGTTCCTGGCCATCGCTTGCTGGGTATGTGGATTTTCCCTGGCCATAGTCCAAGTAAGT Gene GeneID:787740|LOC787740:XM_002687027:96_cdna Constitutive 0 NULL GeneID:787740 4 GENE LOC787740 NULL similar to olfactory receptor OR7-15 EMBV3_26723 TCCCCATTTCCCCCTACTGACCAGATGTTGCTGCCTATTGTGGTGCCTTCTCTCAGGTTA Gene GeneID:538559|RHOG:NM_001080305:16_cdna Constitutive 0 NULL GeneID:538559 15 GENE RHOG MGC140398 ras homolog gene family, member G (rho G) EMBV3_41222 CTTCGTGTGTAGGGGGTAGTGACCATAGTGTGGGGGTTGGGGGCAAGGACAGTTTAATGT Gene GeneID:541233|RCOR2:XM_002699323:160_cdna Constitutive 0 NULL GeneID:541233 29 GENE RCOR2 NULL REST corepressor 2 EMBV3_10788 CCCAAAAGACTACGGTGCCCAGATTTTTTCGGCCTCCAGTCACTTTGTGTGAAATCTCCG Gene GeneID:282365|SLC6A4:NM_174609:37_cdna Constitutive 0 NULL GeneID:282365 19 GENE SLC6A4 NULL solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 EMBV3_42599 TGAAACAGTTCAGTCTCCTCACAGTTCTCTCCTCTACCCTCATCAGCCAGACGTGTCCAT Gene GeneID:404075|TKDP4:NM_205775:805_cdna Constitutive 1 NULL GeneID:404075 13 GENE TKDP4 NULL trophoblast Kunitz domain protein 4 EMBV3_00676 TAGACTGTTTCACTTCTACTTGCCAACACGCCTTGCTGGACTTATGTGGAGTTATCTTCG Gene GeneID:513877|SRBD1:XM_002691304:418_cdna Constitutive 0 NULL GeneID:513877 11 GENE SRBD1 NULL S1 RNA binding domain 1 EMBV3_17854 AGTGGTCTCCAGTCCTGCTCTTGTCATCCACTGTTAAATCCCCATCAGGCAAAACCTGCT Gene GeneID:787270|THEM4:NM_001080368:178_cdna Constitutive 2 NULL GeneID:787270 3 GENE THEM4 MGC152209 thioesterase superfamily member 4 EMBV3_19473 CGGTTCGGTCGACTGTAGATAGGAAGGCCAGTGCGCTTTCTGCAGTGGTGAGTCTTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00438 AGAAGGCATTTGTGATGCAGCAGGTCCACACAGCAGCAACCTCCTGCTCCTGGTGACAGA Gene GeneID:784075|CACNA2D4:XM_002707821:91_cdna Constitutive 0 NULL GeneID:784075 5 GENE CACNA2D4 NULL calcium channel, voltage-dependent, alpha 2/delta subunit 4 EMBV3_38949 CCTCTACGTGGTGGTGCCCCCAATGCTCAACCCCATTATCTATGGAGTAAGGACCAAACA Gene GeneID:788633|LOC788633:XM_002693282:69_cdna Constitutive 0 NULL GeneID:788633 15 GENE LOC788633 NULL similar to olfactory receptor 67 EMBV3_26910 CCAACTGTCAGAATGAGAGCCGCCAAGTAGCAGAATTTTGAGTGTCAGGTTATGGGGACG Gene GeneID:509462|ZBTB43:NM_001024503:11_cdna UTR3_Alt 1 NULL GeneID:509462 11 GENE ZBTB43 ZNF297B zinc finger and BTB domain containing 43 EMBV3_10963 CCTTGGGAAGGGTAACTGTTCTTTCTGTGGGAAGGGCAGAAACAGGCATTTGATTCAGAA Gene BVT0102_385702 + 1 EMBV3_31888 GK000002.2:126965130-126983129 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03378 CTGAGCGACTATATCGAGAAGGAGGTGAAGAGAGCCCACCAGCTCCCCGGACACCTGACC Variant GeneID:506450|CCM2:XM_002686879:67_cdna 658^741 3 EMBV3_26922 GeneID:506450 4 GENE CCM2 NULL cerebral cavernous malformation 2 EMBV3_19085 TGGGTCAACACAGATCAAGTCAATAGCTCAACTCCATCTCAGTTCTTGCCTCGGCCACCA Gene GeneID:541215|TTBK2:XM_002690812:43_cdna Constitutive 0 NULL GeneID:541215 10 GENE TTBK2 NULL tau tubulin kinase 2 EMBV3_25067 GAGATGATGTTTTGAATCACCGATTTCTGTTTTAGTTTCACCACGTCCTCGGGGAGCCCC Gene BVT0101_010662 + 0 NULL GK000018.2:43929841-44005706 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090311 1 XLOC_055092 NonCoding TCONS_00090311 XLOC_055092 NonCoding NonCoding - 18:44003619-44005391 - TSS67657 1772 2 TCONS_00090311_3 91 0.159706546275395 1 0 0.000322482922245456 0.000147437534481284 0.000240228238291587 0.000239002763271772 1.95035828373277e-05 5.24850195881511e-05 6.25295797264338e-05 0.000377180565785754 0.000320592518921582 0.000285599954373169 0 0 0.0001182042446333 2.65462076779528e-06 0.000567590733164333 8.94299338776926e-05 0 0 0.000206386970346843 0.000142042904034863 3.42632678613684e-06 0 0 0 3.90997207313758e-06 0.000405552016821953 0.000234763172020546 0 2.73961759809023e-05 6.10725034493575e-05 XM_005195301.1 LOC101907521 PREDICTED: Bos taurus fibril-forming collagen alpha chain-like (LOC101907521), mRNA. 0.0 1507 100.00 0.470654627539503 0 noncoding 0 0 0 0 -0.144748786046668 0.515855451944013 0.0134023873270741 0.768989353433329 CCAGGCCACAAGGTCCTGTCCATCTCATCACTCTCCTCCGGGGCACTGTGCTTTAGCCACTCTGGCTTTAAATTTCTCCCATCTCCAGACCTTTGGGGCTTCCTTGGTGGCTCAGAGGGTAAAGAGTCTGCCTGCAATATGAGAGACCAGGGTTTGATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGATATGGCAACCCACTCTAGTATTCTAGCTTGAAGAATTACATGGACAAAGGAACCTGGCGGGTACAGTCCACAGGGTCTCAAAGAGTCGGACACGACTGAGCGAATTCACAAGACCTTTAGATGAGCGAGATCCTCTGACTTGAAGACACATTCCCTTTATCTGTACCACTTAGGCAAATCCTACTCATCATACAGGGTTTCCCTAACCCATAGACCAGGTTTGATTCCCTTCTCATAATCTCTTGCAACATCTTGTACTTCTTTCTTAAAATAACAGTGAAAATAGTCATTAGAAAACTGTGTGATTACTGAATGTTTCTAAGTGTAAGCTCCGTGTGGACAGGGACTGTTTGTTGCTGATTCCCAACAGCTTAGCACATAATTGGCACCAAATAAATACGTGTAAACCGAGTAGAAGAAAGAATTACCAGCTACCAGCTGAGGAGGAAATAAATACTCTAGTCTCCTTGGCATTGACTAGACCTGCTGAATGTGGAAGAAGGCCTGCCCAGACAGACAGGCAGAATGCTGGAGCAGCTTGGCAGAGTGGTTAGCAAACCAGAGGATACATGAACCTACCCATAGTTTATTTTTTATACAGTTTTTTAAGTGATTAGGAAAGAGTGGGTGTAGTTATGATTTTGTGAGCAACAAAATCGAATCCAGTTTTAACAGTGCTAAAATCTTGATCAAAGAAATTTCAACTCGGAACACTAAGGGCCAAAGTGAAAGAACATAGTGTTTTTCATGATTCTGTGTCATTCTACCAAGTGTGCTTCTGTGGTTATCAGTGCTCATTTGCAGTTGCCTCCCTTTTGATTTTTACTATCTTTATTTTTTTGCAAATATTTTATCATCTCTTCACTGATTCCTCGAAACAGTCTTATGCGATGAGCTGGTGCCGTGGCCTGGGTGATGAAGAAACGTTTCCTCTTTCAAAGACTCCAGTTTTTGGACGATAAGAAGTGCTAAAGAGGAAGCAATCAAACCTATCTGCCTTCACCCTGAGCGCTGCTTCCTGGTCTTGATACGCTTTCAGATTCTCCTGTGAATTGTCTTAGATAAATAAGGATGGACTGCCATCCATTTTTTGAGATCACGTCTCTGTTCACCTGGAGGACAGTACAGCACAAGAGAATGGATCGTGGAAATGCATTCCCCCATAACCACAGTCTGCACCAATGTGACATCAACACTAATCCTACGTTGGGAAAGTTTTGCTCCCTTCGTCTTTCAACAAGTTTGCAGCTGCCTTCACCGCCCTGAAGTCCAGGTCTTCTCTCCAGGCTCCCTCCGAGTGGTGCTGGCAGTTGGCGGTGAGACGTCCGTCGGGCGCCCAGCGTCCCAGGAGGCGAGCCTGGTGGGCCGTTCCGGGAAACTGTTCCAGGGAGCGACGCCGAGGCGGGGCTCCCCGAGGACGTGGTGAAACTAAAACAGAAATCGGTGATTCAAAACATCATCTCAGGAAATTGTGCTTTCCAAAGACAGGTGTTCCCTTCTCGAGGCTACTAATTGGTTCTCCAATTTCCACCGAACCTTCCCCGCTGTCGGCCGCCCACCCCTCGGAGAGCTGCCCAGCGCGC TCONS_00083311 . 5' 182 TCONS_00083311 . 5' 182 EMBV3_42849 ACCAGGTGGTAAAGGGCATCAAGAGGTTTGCACATTTCTGGCTCTCCAACTCCCCAAGAT Gene BVV0102_169183 + 1 EMBV3_18063 GK000019.2:25403238-25409132 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095974 TCONS_00095966 TCONS_00095968 TCONS_00095970 TCONS_00095965 TCONS_00095973 TCONS_00095963 TCONS_00095971 TCONS_00095969 TCONS_00095964 TCONS_00095972 TCONS_00095967 1 XLOC_057843 Coding TCONS_00095973 XLOC_057843 Coding Coding UBE2G1 19:25406831-25496770 j TSS71420 4457 2 TCONS_00095973_4 99 7 0.950521470346239 0.00108815647893353 0.00101052841770438 0.00050612979974547 0.000503019961008072 2.83341856422582e-05 9.55980176853302e-06 1.47019400760887e-06 0.000687357176165166 0.000200285784458528 3.87255971019092e-34 4.35493323549178e-43 2.01181101516669e-06 0.000179602618227208 0.000973736553565881 3.59088594013141e-05 0.000502899226299575 3.25808986493594e-32 2.50022860662652e-48 0.000925410036587778 0.000924465749313838 7.5302980150904e-06 8.50673435107916e-48 0.000193790882079401 0.00025534130832671 0.00106092608623029 4.76885220974335e-28 0.000826368261501155 1.05927706403211e-29 8.51573653472397e-25 1.46867075940781e-16 NM_001082458.1 UBE2G1 Bos taurus ubiquitin-conjugating enzyme E2G 1 (UBE2G1), mRNA. 0.0 2906 100.00 0.361229526587391 NM_003342.4 UBE2G1 Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBE2G1), mRNA. 0.0 2847 88.28 0.506394435719094 TCONS_00095973_4 sp|P62253|UB2G1_HUMAN UB2G1_HUMAN Ubiquitin-conjugating enzyme E2 G1; 2e-69 209 100.00 0.98989898989899 1 noncoding 0 0 0 0 0.220615512287516 0.346168018318142 0.0121479896937513 0.864533046152931 CAGCGCGCCTGCGCGGAGCGGCCCTGCGCGCTGTGAGGCTGTGGCGGGGGAAGGCACCGGTGGGGCCGACGGGCGGGTTGAAGGAGGGAAGCGGGCGAGCGAAGTCCCAGTGCGCGCCGCGGCGGCACGGGTACCCTCCCCTTCCGGGCGTGAGGCGCTGTGAGGAAAGCTGAAGCGAGCGGACTCGCGCCGGCAGCGAGGCGCCGCTACCGCCGCCACAGCCCAGCCTCCCTCGGCTTCGGCGCTCCCGTCGTGGGGGCCCGGGTTCCTCAGCACACCCAGCTCCAGCATCTCCGGAGCCTGTGCCCAGTTCTTCGGAAGCCCCGGCGCCAGCCCGGGCCCTTGGCGGGGAGGATGACGGAGCTGCAGTCGGCACTGCTACTGCGAAGACAGCTGGCAGACATTCTCTGTTGACTTCTTGCTATGACAGATGTTTTCAGTCCCACTTCTCACTACTGACCTTCCTCGTACGACGGTCACAGAACTGGCGCCTCTCTGGGGTTCTGCCCAGAAGATTAGCCTTCCTCGGCTGCTGCTCCCCCTCTAGCTCAACAAAAATCCAGTGGAAGGCTTTTCAGCAGGTTTAATAGATGACAATGATCTCTACCGATGGGAAGTGCTTATTATTGGTCCTCCAGATACACTTTATGAAGGTGGTGTTTTTAAAGCTCATCTCACTTTCCCAAAAGATTATCCCCTTCGGCCTCCTAAAATGAAATTCATTACAGAAATCTGGCATCCAAATGTTGATAAAAATGGTGATGTATGCATTTCTATTCTTCACGAACCTGGAGAAGATAAATATGGTTATGAAAAGCCAGAGGAGCGCTGGCTGCCTATTCACACCGTGGAAACCATCATGATTAGTGTCATTTCTATGCTGGCAGACCCCAATGGAGACTCACCTGCCAATGTTGATGCTGCAAAAGAATGGAGGGAAGACAGAAATGGAGAATTCAAAAGGAAAGTTGCCCGCTGTGTAAGAAAAAGCCAAGAGACTGCTTTTGAGTGACATTTATTCAACAGCTGTAACTTCACTTATTTCAGGGTCTCCAATTGAGAAACATGGCACTGTTTTTCCTGCACTCTACCCACCTATTGCTGGACTTCTGTTGTAACAAGTTGGCAAACACTGGCTGGAACTGGTCTGCAATAAAACATGCCAGTATCAATGCTGACAAGAGCCTAACAAGTGCCAACTTACAGATGATTACGCATTTTGAATTCTAATGAACTGTTTTAACCTTCAGGAAGAATTGTAAAGACCTGTACATAGCACAACATGATCCGGATAATATATATACTGTTCATGTACATCCACAAATACACCTTGTACCAAATAATGCTTTCTTGTAGTAGAATAAGAATCGTGTAAATTCTAAAAAATTTTAGCAGGTTTTCTTTCCTTATTCATTGTTTCTTATCAGTTTTAAAAGACTCCTTAAAGCATGTCAGATAAAAAGCAATTAGGATTAAAAGTTTCCATTTAATTTCCTTTAAACCATTGAGGCTTCATTAAACTCTTTCCACTTACTAAACTTTTGTATCTTCTTTGTTTTGACACACTCCCCTTTACTTTTATCTCTTGTGTCTGCCAGGAAGTTTTCAAATCATTTAGTTCAAATACCGAAGTACTCAATAAGCAACTACTTGATTTTTAATGATGACTTCAGAGGAGCGGTCATCACTAGGTGCTTTGTCCCTTTTGTATTGTACCTGCACCCATCTCTCAGATTGGATACAGCAATAACATTTTCTTGTCGTTGAGAGCTCTTGAATTCAGTCATTATCCCTAGGAACTAAAAAGAGTTAGTTCTGGATTCAATTCAGATTTAAAATGATTGCAATTTACTCCCAACACAAAACTCTGATTTGGTTTTATTTTTGCCCTCAGTTACCTAATGTGAAGGTTGGATGAATAAAGCATGCACAGCTACAGGCTTTCTACTTAACTTCTGGGTTTGCTATTAAAAATGCTGTTTACCCTCGTACCCTTCCCCTTAGCCCTTCATATTTCTTTGCCTCTATTCTAATACTGCAGAATTTTCTCACCTATTGTACAAAGAAATTGCGATGTATATTTTCATGTAATTTGATTTTGGAATTCTGTCACCTTATGTAGTGAGTTCTTCCAAAATATAATTTTTTTCCAATAATTTGTCAAGTTGTTGGCTTTTATTGTATTGAATGAAGGTTATAATAATGAGTGTCAGAGAAGTGCAGTTTAGAAAAATCTCAGGTTGATTCCTTATGCAAACAAACTTAATACTTGAAAATCACACGGCCATCAGTATATATATTGGACTCTCTATGGATTCTTATATGAATCTCAAAGCATTACAGGGCTATAAATGCTTTGCTGTTTGACATATAGATTCTGTCACTGACATAGTCCACTTGGGTTTTTCTTACTGTTTGAGCATAAATATATTTCATACTATAAGTTTTCTAAAACAGTTTTCAGGAAGTGGTAAAATAAGCATGTGCAGTGTTAAAGGCAGGCCCAGGTTTCTGTGTTTGGTATAAAGTTGGGACTGGGACAGTGTCTGGCATAGAAGGGGCAGAACTTGAGACAGTACCTGATGAGACATGGTGTTTAACTGTTGAGAATCAGTGAGAACTGGTACATCTCTGCTTTGTGGGGTTTGGAGAAATTTTTTGACAGAATGAAAGGATTCCTGCAAGTAGCCAGTCCTTTACAAACTTTGCGTGTCTTTTTTAAAGTGAAATAATTAAGGATGTAGTCAGAGTAGAGAGTGATTTTTCTAAATCTCAGCCTCTTCTTCACTCTGAAGCATTAAAAAACAAACAAAAAGCCTGTAAATGTATGATGGCTGAATGTGAAACTGTTTTGAGTCACTGCAGCCAGTTTCTCTAAGAACTCTGCTTGTGACTTTACTTTTTTTGTGTGTGTGACTTTACTTTTTCAAAGACTCTGTCAGCACTGTTTCCCCAAAGCACCAGTACTGCATACTTACCTGGGACTTTGAATGCCATCCCTTTTATTCTTAAATTGTCCACGTGATGGTGGTTTGTGGCAAGATGGAGTCTGAGTTTTGCTCTCTTGTGGCTGTAATTCTCCTAGCAATCTCTTGAGTTAAAACCTGGGATTTGACTCTTCAGGGAGGAGCAAAGGACCAAGTAACTCAGGGACAACTATTCTTAAACTCTTAAGTGCCACTTTAATGCAGTTACTTTGGTGTGATTGTGTGTTTTTTAGGGCTAGATCTTGGGGAGTTGGAGAGCCAGAAATGAGCAAACCTCTTGATGCCCTTTACCACCTGGTGCCCTGACCATGCTACATATGGAAACACAAACCTCGAGAGATGTTTCGGCTTCCTCTGTCAGAGGTGTCATCTGTGCCTTTCCCAGTGTTCATCTGACAGTGTGAATCTAAATGGCTCTACATTTGATATTAAACCACACTCAGGTGACACTAATTCTGGTGGCTTTTGTCCCAGCAATGCCTCATCATTTGTGTGAGGTGAGTCCTCTGCTTTAGGGAAAGGATTTTTCTCCCTGACCACGTGCCAACTATCAACAACACCTGTATAGTCTTAAGGATTGTAGAACTGTTGGCTGTTTCCTAAATTTACTCCAATTTCTTGTAAAGGCTTATCGATTTCAGTCTGGGCTCATAATGAGATGGACTATTTCCGTGGCTTTCTGGCCTCTTCTGGTGAGCTTAAAATCCAAATGAGGTTGGTTTCCGTGTCATTACAAGGTAATATCTTTGTGAGGTTTTTCGACTAGTTCTGTGATCACTTGGGTGTCATAGTATCTTTAATGGCCTTCATTCTTGGTTGTGAAATTTTATATGCTCATTCACCCTCTACAAATCTGCCCATTTGGGATTGTCATGCCTGTGTATCTTTGCCCATCTGGTCTCCAGTTGGTGGAATTACCTTTTGTGTACTGCCACTTCTCAGCATCTTTGAAATTTGACCTAATGTTGCTTCATTCCAGTTTTTTTTTTTCCTGTAATTTGTTGATTGTATTTATATGAGAGTTCTGTTGTGATGTTTACTGTATGTAAAGCACCTGGATCATGTGATGGGTGCTCTATGAATCAATAAATGATGACTTAGAGGCTGTATCATGAGCTGTTTTGGTTTTAGGATGTAGGTCTCCAAAGTAAGTTATGGTATTCTTTCTATATAAACAGCACATGATACCAAAGGGTCCACTGGGGAATCTTGATAACTAATTTTTAAAACTTCATTTAAAGAAGGAACCAGAGGATAGGAAGTTCACTTGACTTCCAATCTCATATAATAGTCTTAAAATTTCCAGTATGAGGCCAGCCAACCATTCTTCATCAGAATTTCATGCATGCTGATTTAGAACCTTATGTAAAATAAAATGAGCACCTGTTAGAGCATTACTGGGGATTTTGTCTGTAGCCTAAACTGGTTGTACCATGAAGATAAGCTAAAAGGTAAAGAACCCAGACTCAG EMBV3_20928 CACAGTGTAATTGACAGGGACCCGATGAGGTTGCTGGTTTTTGAAGCATCTCACCTTTGG Gene GeneID:787784|DNASE1L2:NM_001105019:336_cdna Constitutive 0 NULL GeneID:787784 25 GENE DNASE1L2 MGC151816 deoxyribonuclease I-like 2 EMBV3_31569 CCCTTTGCCACCACCCTCAGGAAGATACAGTTGGAATTAGGCTTTTGTAAAGCTTTCCCA Gene GeneID:517417|XRN2:XM_002692141:123_cdna Constitutive 1 NULL GeneID:517417 13 GENE XRN2 NULL 5'-3' exoribonuclease 2 EMBV3_24916 AGAATCCATGAGCAGAGGCCTGTGCCCCAGGTTTTCCGGTTCAGTGTCGTCGTCATTAAA Gene GeneID:534876|PAQR3:XM_002688378:13_cdna Constitutive 2 NULL GeneID:534876 6 GENE PAQR3 NULL progestin and adipoQ receptor family member III EMBV3_20786 CCTGCAGCCGGCCGCGTATTCACTTGTGATTAAACGAATTCGCGCGGCCGGCATGGCGGC Control NULL NULL 0 EMBV3_08639 NULL NULL NULL NULL NULL NULL EMBV3_15017 CCCAAGGCACCGAATTCTAGGACACGAAAGCTATCACCTCCACCCTCAGCCTCCTGAACG Variant GeneID:511690|ST6GALNAC2:NM_001075533:380_cdna 234^408 3 EMBV3_16818 GeneID:511690 19 GENE ST6GALNAC2 MGC139669 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 EMBV3_11034 GCAGACTTGCCTCTTGTATGCAAGGACTACTGATTGAAGTCTATTTTGCTGTGTGTCTGG Gene BVT0102_029137 + 0 NULL GK000019.2:21363338-21378076 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092651 TCONS_00092649 TCONS_00092650 1 XLOC_056943 Coding TCONS_00092651 XLOC_056943 Coding Coding TAOK1 19:21262609-21373964 j TSS69667 13993 1 TCONS_00092651_4 1001 0.00700350175087544 20 0.874517305170896 7.58394396113517e-06 0.000466663084398128 0.000428825881984645 0.000342178882224654 0.000571668529995662 8.82113694203813e-05 0.000548106533531107 0.000352877764617049 0.000335218349530034 9.96565916445811e-05 6.35492207642818e-05 1.11415614743587e-06 1.45782595458596e-05 0.000422196744096605 6.41065265722337e-05 0.00437460914151542 0.00252881940039935 0.00150576181961477 0 0.00102196137251189 3.27675037773701e-05 0.00115212782707169 0.00131562124058564 0.00269739248258912 0.000998689045519355 0.00099586561962531 1.12581370413865e-05 0.00016479049533521 0.000172873849972508 9.65075707707347e-07 XM_005220110.1 TAOK1 PREDICTED: Bos taurus TAO kinase 1 (TAOK1), transcript variant X1, 0.0 1.221e+04 100.00 0.483670406631887 NM_020791.2 TAOK1 Homo sapiens TAO kinase 1 (TAOK1), transcript variant 1, mRNA. 0.0 1.460e+04 86.74 0.860001429286072 TCONS_00092651_4 sp|Q7L7X3|TAOK1_HUMAN TAOK1_HUMAN Serine/threonine-protein kinase TAO1; 0.0 2072 99.70 0.999000999000999 2 coding 1 0 1 1 -0.238082285802037 0.122857914346482 -0.0574632873070039 0.320880845397433 NCCTCCAGCATAGCGGCTCCCTCGGCGCTGCAGGGGGCTGCGCCTGCCTACTCCGCCCCAGACCTGTCGGCGAAAGGCTTATGCCAGCGTGGCTTCATTCATACAGATGAACCAAGGATTGGGATAGCAGTATAAAATTAGAATCAGACAGCTGATTGCCCAGCAGGATGCCATCAACCAACCGTGCGGGCAGCCTGAAGGACCCTGAAATTGCAGAGCTCTTCTTCAAAGAAGATCCAGAGAAGCTCTTCACAGATCTCAGAGAAATTGGCCATGGAAGCTTTGGAGCAGTCTATTTTGCCCGAGATGTACGCACCAATGAAGTGGTGGCTATTAAGAAAATGTCTTACAGTGGAAAGCAGTCCACTGAGAAGTGGCAGGATATTATTAAGGAAGTCAAGTTTCTACAAAGAATAAAACATCCCAACAGTATAGAATACAAAGGCTGCTATTTACGTGAGCACACAGCATGGCTTGTAATGGAATATTGTTTAGGATCTGCTTCAGATTTACTAGAAGTTCACAAAAAGCCATTACAAGAAGTGGAAATAGCAGCAATTACACATGGTGCTCTCCAGGGATTAGCCTACTTACATTCTCATACCATGATCCATAGAGATATCAAAGCAGGAAATATCCTTCTGACAGAGCCAGGCCAGGTGAAACTTGCTGACTTTGGATCTGCTTCCATGGCATCTCCTGCCAATTCTTTTGTGGGAACGCCATATTGGATGGCCCCAGAAGTAATTTTAGCCATGGATGAAGGACAGTATGATGGAAAAGTAGATGTATGGTCTCTCGGTATAACTTGTATTGAATTAGCGGAAAGGAAACCTCCTTTATTTAATATGAATGCAATGAGTGCCTTATATCACATAGCCCAAAATGAATCCCCTACACTACAGTCTAACGAATGGTCTGATTATTTTCGCAACTTTGTAGATTCTTGCCTCCAGAAAATCCCTCAAGATCGCCCTACATCAGAGGAACTTTTAAAGCACATGTTTGTTCTTCGGGAGCGCCCTGAAACAGTGTTAATAGATCTTATTCAGAGGACAAAAGATGCAGTAAGAGAGCTGGACAATCTGCAGTATCGAAAGATGAAGAAACTCCTGTTCCAGGAGGCACATAATGGACCAGCAGTAGAAGCACAGGAAGAAGAAGAGGAACAGGATCATGGTGTTGGACGGACAGGAACAGTGAATAGCGTTGGAAGTAATCAGTCTATTCCCAGTATGTCCATCAGTGCCAGTAGCCAAAGTAGTAGTGTTAACAGTCTTCCAGATGCCTCAGATGACAAGAGTGAGCTAGACATGATGGAGGGAGACCACACAGTGATGTCTAATAGTTCTGTCATCCACTTAAAACCTGAGGAAGAAAATTACAGAGAAGAGGGAGATCCTAGAACAAGGGCATCGGATCCACAATCTCCACCTCAAGTATCTCGTCATAAATCACACTACCGTAATCGAGAACACTTTGCTACTATACGGACGGCATCACTGGTTACAAGGCAAATGCAGGAACATGAGCAGGACTCTGAACTTAGAGAACAAATGTCTGGCTATAAGAGAATGAGGCGGCAACATCAAAAGCAGCTAATGACTCTGGAAAATAAGTTGAAGGCTGAGATGGATGAACATCGCCTCAGATTAGACAAAGATCTTGAAACACAGCGTAACAATTTTGCTGCAGAAATGGAGAAACTTATCAAGAAACATCAGGCTGCTATGGAAAAAGAGGCTAAAGTGATGGCCAATGAAGAGAAAAAATTTCAGCAACATATTCAGGCCCAACAGAAGAAAGAACTAAACAGCTTTTTGGAGTCTCAGAAAAGAGAATATAAACTTCGAAAAGAGCAGCTTAAGGAGGAGCTGAATGAAAATCAGAGCACCCCCAAAAAAGAAAAACAGGAATGGCTTTCAAAGCAGAAGGAGAATATACAGCATTTCCAAGCAGAAGAAGAGGCTAATCTTCTACGGCGTCAGAGACAGTATCTAGAGTTGGAATGCCGTCGCTTCAAGAGAAGAATGTTACTTGGGCGTCATAACTTAGAGCAGGACCTTGTCAGGGAGGAGTTAAATAAAAGACAGACTCAGAAGGACTTAGAGCATGCCATGCTACTACGACAGCATGAATCCATGCAAGAACTGGAGTTCCGCCACCTCAACACAATTCAGAAGATGCGCTGTGAGTTGATCAGATTGCAGCATCAAACTGAGCTCACTAACCAGCTAGAATATAATAAACGAAGAGAACGAGAGCTAAGGCGAAAGCATGTCATGGAGGTTCGACAACAGCCTAAGAGTCTGAAGTCTAAAGAACTCCAAATAAAAAAGCAGTTTCAGGACACCTGTAAAATCCAAACCAGACAGTACAAAGCATTAAGAAATCACTTATTGGAGACTACACCAAAGAGCGAGCACAAAGCTGTTCTGAAACGGCTCAAGGAGGAGCAGACCCGGAAGTTAGCCATCTTGGCTGAACAATACGACCACAGCATTAATGAAATGCTCTCCACCCAAGCACTGCGTTTGGATGAAGCACAGGAAGCAGAGTGCCAGGTTTTGAAGATGCAGCTGCAGCAGGAACTGGAGCTGTTAAATGCATATCAGAGCAAAATCAAGATGCAAGCGGAGGCACAGCATGATCGAGAGCTTCGGGAGCTTGAACAGAGAGTCTCCCTCCGCAGGGCACTCTTAGAGCAAAAGATTGAAGAAGAAATGTTGGCTTTGCAGAATGAACGCACAGAACGAATACGAAGCCTGCTGGAACGTCAAGCCAGAGAAATTGAAGCTTTTGACTCTGAAAGCATGAGACTAGGTTTTAGTAACATGGTCCTTTCTAATCTCTCCCCTGAGGCATTCAGCCACAGCTACCCGGGAGCTTCTGGTTGGTCTCACAATCCCACCGGGGGTCCAGGACCTCACTGGGGTCATCCCATGGGTGGCCCACCACAAGCTTGGGGCCATCCAATGCAAGGTGGACCCCAGCCGTGGGGTCACCCCTCGGGGCCAATGCAAGGGGTACCCCGAGGTAGCAGTATGGGAGTCCGCAATAGCCCTCAGGCTCTAAGGCGGACAGCTTCTGGGGGACGGACGGAGCAGGGCATGAGCAGAAGCACGAGTGTCACTTCTCAAATATCCAATGGGTCACACATGTCTTATACATAACTTAATAATTGAGAGTGGCGATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCGTCACAGCAGCCTCCTCACTTGGGTACTACAGTGTGGAAGCTAAGTGCATATGGTATATCTTACTCATTTTTGTAAAGCGTTCTGTTTTGTGTTTACTAATTGGGATGTCATAGTATTTGGCTGCCAGGTTTTTTGTTTTTTTTTTTAACTTTTGAAGAAATTTTGAAAAGGGGAACTGTCATGTAGGTGTGTATACAAATACATACACACCCATATATATGTATCAAGCCTGTGGTTATAAGAAATTGGGTAGATAGGGGGTATTTTTGAAAACTGCAAAAATAGACTGCAGCAGTGTATCTTGAGTCATCACTTTGGGGCAATGACACATCCTAAGAAGGATGTGAAAAGATCTAAAGCCTTTCTACATATCCCAGATTCTTATAAGCCACTCACAGCAGGCAGCATATGCTGAAACAAGTTCTTACTGAAACACATCTGTATCCCCTTACCAACGTATTTTCTTTATTAAATTGGTCTGACTTCTCAGCCTCATTTGGAGTGAAAAAGAACATGGAAATCCATGAACACTAAAGGGTTGCATTGACTTTTTCAGAGAGCAGGAAACAATTTAGTTCTTTTTCTGAATGCTGCATAGATTTGTCAGTGAATTTTTTTTTTTTTTTTTTTTGGTGCATTCAATTGTGCCTTCTTTGTGGCATGGTGAGATGGAGGTGCTTAAGGAGATCACAAGTGGTGTGGGAATTGTATCAACAAACCCGTGAGCCTTTAAAGGGGAAGACTAGAAGGGTGAGAGAGGCCCCTGAAAGTTCATATGGTAGGTATGTTCAGCAGCAAGAGTGAGGAGATGAAGCCTCTGTATCCTGACGTTTCATTGCTTATACTGTGATATCTCATCCTAGCTAAGCTCTATAGCTTCCAAGACCCCAAACAGTACTTCTACTTTGTACAAAAACAAAGATATATAGCCAATACAAATCAAATGCCAGAGGTATTTGAATGATGCCATATTTGCAAACTGCCATCTATTGGAATTTTCACCACACTACATAGACATAATTTGATTACCCCCTTTTGGCTTATGGGATTTCCTGTTTACAAGTAGAATAGCCAATTATTTAAATGTTTAGTTGCCATAGTGAACCAGGAGTCACTGAGCCAATGGCTTTGCCAGCTGCTGACTAATCCTCATCACCACTGTAGATTTTGCTGCATGTGCAGGTCCTCTTTTTTTTTTTTTAATTGCTGTTTTTGTTGCTGCAGTAGTTTACAAACTTCTAGTTCCTTGAGCCTTAGTGACCATTTGGCATCATGTTAACATCACACAACAGGAAACACCACTTCCAGAAGTCTCTAGCCTCAGTGCTAAAGTACTACTGAAAAGGAACTAGCTAGTTTGGCAAAGTAGAAAAAAAAAGTAAAGTAAGTTATAGTGGTCAGGGACTCTCTTGACAAACGCTAACTTTTTTATTTTTTCCCACAGAGGGGCATGTTTTGTTTTGTTTTATTTTGTTTTGCAATGAAGGATCAACCCAATGCTGAAAGTTAGATGTTACTTGGTATTCCACTGTTAGTGTGGAAATTGAGTTGAAGGTGGGTAGGAAGCTGTGAGTATGACTTGAAGGAAAAAAAATGTTCTTTTCAGTGATAGAGTTTCTTACAAGTTACTGTTTTGCCCCTTCCCTTGTCTTGAAGAACCCTTGCTGCTAACTCTGGATCCTGCTTTTCATATAGTCAGAGGACCCCCAGGTAGAATTTTCTAAGGCCCTCTCAATGATACTCTTCACCTAGGTCCAGGCTAATGACCAACCAGTAATCTGTTTGTTGAAATCTTGGTTTTCTCAACCAAATTTAAGTCTTCCCCAGGTATGTCAGTCTAATCTCCATGAATCCTCCCCTTTAGGAATTTCTGGCATTCATTTAAAGGTAACTGGAAGAAAAATTAATGTAAGTCTTTTAAAAGCCAAGATCACAGTAGAACTCACACAGTTTTAGGCAGTGTTTCAGGTAGCGCTCTGGTACATTGTCCTCTTGGCCAGGCTTGAAATCACCAGTTTTTAGGTGAACATGACATGTACTTGCTTGTCTGTCTAATGAAAGGGGCTTTTAATTTTCTGTCTTTTTGCATTCATGTTGTATACAGTATTTCAAGCAAACTGAGGTATCTACCTATTTGGAGGAAAATGATAGGAGAGAGCTTTAGAGTTAATAAAATGTATAAAAATATAATGAATTTGATACCTTTTATAAAAATTCTTACTAGATCTGGCCCCTCTGTACTGCTGGAGGGGTGGAATAGAAGTGCAGATCAATTTTACATATAAAACTCTTTAAAAAATACTACCAATAATACATGTTAAAGTCCACTTGTGGACTTGAATTAGTGAAATTGAGTTATTGAATTCATGCAGACCGTATGTACTTGTAAAATTGTGGTTGAATACTGACTCCAGATGTCTATCCAATAGGTTGTTGTATCTGATGTGTGTGGCAACCAGTTTTACATGTAGGTCATGACTATACCTGGATTATTCCATTAAGTTAATTTTAATTAAAGTATATATAGTTTGCAAAAATGGTTCAAATTAATTGATTTGTGTGTGTTTGTAAGATCTAACTTCTGAAGAATATCATACATAGTAGGAATCATCAGAGTAAAGCTTGTAGCAAGAAAATTTGAAAGGTTTTGAGAGATCCTAAAGAAAGAAGCAGGCACTTTCTGAATCAGAGTACAGACTTCAACATTTGATCAAAGTACTACTACCTCCTCCCCAGTGTTGGTGTTCACTATATATAAATGTGTTTGAGAAAATAAGAAGTATGGGAGATTTTACACACGCATATCAGAAAGTCGTATACACTATGTCTGGCATCCAGAGTCGGCAGTGTGAGTTTCTTACGTTCACTCTCTCCCCCTTTTTTAAGTTCGCATTTGAAAAATGCAAAACCTCATACCTTGATACATTGTTCCTAATGGGGTTCCCTTCCTTTTGCACTTATTTTTCCCTTATTAAAGTCAGCTCTAACCCCAAATTAAAGTATCTGGAAGTATTTTCATTATATAGACAACATTAGCTGGAAAATATGTTTATATTTTATTCAGAGCTGCCATTCTTTTCTAAGTCATTTCTGTGCCTAGAGATGAACAGTCCTGGAATTGAAGCCACACCCATGGATATGAGATGCTTGGTACTCTAGGCCAAGGGTTTATTGGTAAATTGAACTTTTTAGCATAGTCAATATGATTTTCAGCTGCCTAGACATCAAGTAAACACCATTTAGCACACTAAAGAAACTGTCCTTGACTCTCTCCCACTCCCACCTATTTTTCCTCTCCCCCTTTTCAAAAATCAAAAACACTTTGAGTATCTTTTTCAAACCATAAGGCAGACTTTAGTAACTTTCTACTTCTTTATGTCTGGCATTTTAAACTTTTATAGAATACATTGTGTTGGACACTGGAATAATACTGTTTATTTTCACCTGTGAAAAATGACTCTATTGTACTTGAAACACCTCCTTTGCATTTCTCCATTTGTGCCATTCACTAGTGGAAATAAATTGTATTATACCATAATCTACTGGCTTTTAAAAACTGTGTTAAATATGCACATTTTTGGTATAGCTATTATCATTTGTATGTATATATTGTATATACATATGAGTGTCTATATGTGTGTATAGATAGATGGATATAACTCATACTGTACATTTCCATCAGGGCACTTAAGGTTCTGTTATATTGTTTTGTTATTTCAGTCCTCAGTTAAGGCAAGAATGCATGTGTTTCTTAACAATTGAATACTCTGGGTTGATATTTATGAGAAGGTGGTCATTAGATGGAGTCTTTTCTTTTTTGATCCTTTCTTAGCACTTGAGTGGGTGGAAAGAAAGTTAAGTAAATTGTGGAACCATAAGTTGCAATGCAGAAAAGTAGTGCTGGGGAAGGAACCAGTTAGTGTTCCTGTGAGTTTGTGTCGTGATGCAGTGAAAGATAGTGATGCAGAGAGAAATGAACCATGGAAACTAGAAACCACTGGTGGTGATTCCTCTGCAGAGATGAAGAGAACCGATAAGTCACATAATCTTCATGTGCACTCCATCCATACATAGTGGTGCCATTGATCCTCTTACCCTTTTTGTTCCATTAATAATGATGATGATAATTATAAACTTTGCTAAGGACCAAAACATCCAAGAAAGAAATTACTGCTAAAGCATCTAAGGTTCTCCTAAACAATAAAGTCAACAGGAAATGGCCACTGGGAGAGAAGGATTTGGTGTTGGCAAGGGGCTTTCTCCTTTCGGCTGCCTCTTCTTGCTTGCTGATAGTGAGTTCTTCATGTACTGTCCACCCCTTCAGAGGCAAATCTTTGTAAGCACAGCTTTGGCCCCACACTGCAACCCTTTCCTAGGAAGTTTATATGGCCCTGCGTTTTGTTCCATGCTCACAGTGTGAAGTGTCTAGTGTGTATTCAAGTCAGAAAATAATATATTTAAGGTGTTTAAGTGTGAATCTCCTATAATGATGAAAGAGGAGGCTCTTATGTCTTAAAAAAAAAACTGTCTTCTCTAAGGAACAGATCTAAAACTTGGGCTGTCATCTTGGAGTTGCTTACCAAAATACAGATCATTATTGTTAAAGAGAAACTGATTCTCTGTTTTCCTTCATCTGTCATGATAGTGCCCCCAACCAGGCTGTAGCATTACCTTTGAAAAGGCCCTCACTTACTCTTAGTTGTTAAGAACTGGAAATTTTCCATCCTCAGATTCCTTAAAGGATGAAGAGTATGCTGTACACTTAGCAGACTTGCCTCTTGTATGCAAGGACTACTGATTGAAGTCTATTTTGCTGTGTGTCTGGTTATGTTGTCTGCACTTTTATTAAATCACTACAATAAGTCTACATTGGAAATGACTTAATTTGTAAAGAAGTTTTATTAAACACTGTCTAGAAAAAGAAAGTGAAGCTGAGAACTCTTCCTTTGCTGTGTGTTTATATTTTCTACTGAATTCTGGTAGCCCCTTTTAAAGTCAGTTGACTAGTTCTTCCCTCACTTACATTCAGATTTCCAAAATTTCACTCATGCAAGGGAAGAGAATCCATTTGGCCTAATAGTAGTCCTCAGATCATAAGTACATAAATTAGTATGCACCTTATCTGCCTGTTGTGGGTTTCTTAAACTTGCACTTCCCTCTCACCCACCCCAAAATAGATATCCTTTAAAGAAAATAAAGGCAGAGAATAAAAACTGGGGAGCCATTTACTATGTCACCATCACTGTTAACTGTTACCCAACAATCAGAACTTTTTGAAGTTTCAGAGGATGTGTGCATGTGTGTGTGTGTGTGCGTGCGTGTGTATCTGTTTGATTGTGTTGGGTTTGTTTATTTTTAAATATACAAGAGATTCTTTTTTTAAATAGAGAAAAAGGTTAATCCTCTCTGAAACAGGATGCCCATTGGATATATTAATCTAGACATCTGTAGGTAGTTTGCCATGAAAAAGTGGAGAGAAGATGAGACTTGTGAATGAATGAAAAGGGTATCTTGATACCCCAGAATTCCCCCCAAAGTACGGGTAATTCAACCTGCACAGTTTCCTTTTCACTCATAGTTTTTAGCAATTGTGAGTGAAGAAATCGTGTAATTATCTGTAAATATGTAGCTAACAAATTGACCTAGTTTCTGTATTTTTTTCGTTTTTGTACTAAAGTTTATAAGTCTGTGCCAGCTAGAGAGGAGTGGCTGTCATTGCCAGTTGTGGTCCTAGCATCTAACCCTGAAACCATCCTAGGTGACATTTTTAGAATTAATGCTTCAGTGTTGTTAAACAGGGGGAAGTTAAGTTTAATCATTGGTCAGGTTTAAAATTGTTTGAAGCAGAGTCATTTTATTTAATATGATTACATGTCCTCAGTCATGAATGAGGTAGGGAGCCTCCCTCCCCCAGTGGCCATGTTTACAGAAGTGTGTTTTGTCTATAAAGTGCAAGAGTTTTAATGTTTGTGTAAATTACGCAGGTGATAACATTATGGCTTGGAACTGTTTATTGGGCTCTCTCGCTGAATTTTCAAATGAACTATGCTTATTACTGGCACATTGATCCCATTTCTGGAGCATTTTTCCTATTTCCAGAACTACATATGTTCCTTTGTCATTATCCCTTGATATGCCTTGTAGCCTAAGGTATTAAAAGCTGGTAAACATAGATGAGGGAAATGCGTTTTTTTAAATCCATGAACCTTCACTTGTATGCTTTCATTACTCATGTTATGTTTCTATGGCAACTCTGAGGTCAGTGGAGTTTAGAAATGAGATACCAATATTAATGAAAAGTGTGTGCTCTTTGCTTTTGCATGGCTTGGCTTAGCATCAAAGGTATATTAGGCCACTTGAAAGCATGAAGACCAGTTGTATGGGAACAGGTTTCTCTCGGTGGCACATTTTGCTTTTTCTGAGCCCTCAAATACATTGCCTCAGCGTGAACATTATTGTTTCTATAATTACACATGGTCATGGAATGAATTATGTGACTTAAAAGGATGGAACTGCTTGATGTTTGCAGATTCTAACTGGCCATGTGACTGTTTGGCACATATCACACAAACCTGGGGGGAAATATTGGAAGCCTTCTAACCCCTGTTTAGTCATAGACAAGTGTATTCAGCTTATCAAGATACTGACTGCCCCTGTTGTGTCGCCAGAAAGCTCTTCTTTGGTGTCCATTCCAAATGTGCTTTCTTGCATTTCATAATATCAAAGAAACCACCACCTCTTCTCTCAAAAGCATTTTATATGTCATACCTTTTATTCTATATTAAATGGGAATTGTGCCTGTTTAGAGTGCCCCTCCAATTAATTACATCCATGTGTCTAAAATAATCCAAGCCGGAGGCACAGGTGGGAAAAACATTTTTTTTTAAGTCCACTCAAGGCCAGTAATTTATCTGACAAGGTATTTTACCACATTATCTTGACATTTGATATATGAGCCTATTAGAAATTGCAGGTGGTTTCATAGGGCAAAATCCAAGTGGAGAGGGATATGTGGGGTTTCTATTAAGAGATAATTTTGTTATTGTTTTACCTCTCCTTTTACGATCCTCCCCTGCTAGGTTAGAATGGGTTAATTCTCCAAATTTGTTTTTTATCTTTTAGGGAAATTTTTACAAAAGCAATGGTCTGATGTAAATAACATTTTGAAGTATAGTGCACATAACTTCCCCAGACTATTCCAACCTGATAATTTGTAAATGCTTTAGAGTTTTTTAAATTAACACTTGTGTTGCTAAATCCTATTTATGTAAGTCTGCTAAAGATTTTAACCCATTTAAAACTTAAACATTTAAATAATGGATGGGTTGCTCTGAACAGTTTAGCTTTCAGAAACCCCTTGTTTTAGTATATGAAAAGGATAGCCTAATGCGCATTAATGAGGTTGGAGAGACTATGAGAAATATGTATAGTGTATATTTTAAAACAGCTTTGCTTGTATTGTGAAGATTTAAAAACAAACTTGAGATTTTTAACGTAACTATTAACACAGTTTTAACATAAGTTATCCCACTGGGTTTAAGAGCATCTTGAATGTATAATCCTTTTTGTAACCCAGGTTGGTTTCTGCTTTTACCAGTCATCCAAACATATTATTTATGATTTTAGTTTTATATACTCATTTACTTTTGTTTTCCTCAACCAGCATGATTTTTTTGCACATGTATTGTAGAAATTTTTAAAAAGAAAAATCAATACATCATTTTCTCTGAATTTTCTTCACTTCTCTCTTCCTTTCTACTAACCCGTTACCTTAAAGGCCATATCGCTCCATTTGCATTATTTGTGCAAATGCCAGGGTTGGTTTTTATTTTTATTTTTGCTATTTACCGAAAAAAAGAAAAATGCTTCAGTCAATTGCTTTTTTATTTAAAAAAAAAAATTAAAAAAAGAAAAAAAGCTGTAACCTTATCATTTCTGAGTAGACCATTGAAAGATGAATGCACACCTGTAATAGACCAGGACCAGCTTTGGTGGCTAAATGGAATATTTTAACTAAGCAAAAGGTTCTTTTCTAAAAATGGTGTATATAATCCACAATCTCTTTCAGTTATTCCCACAAGTCAGGGGTCCAGATAAAATGAGGGTTATCAGCTAACTGATACGTTATCATTGAGATTCATCAATGAATTTGTACATTTCTAGTTCCCTTTGGTGAAGGGGAAAAAAAAGATTTTGCAAAACCTAGATTTTGGCTTGGTTTATTGCCTCCTTTTTTGGCAGCCTTCATCTTCTCATCTCCCAAAGCCCTTGAGCCTGTCGGGTTTTCATGGTGGACAAAGGACCGTGGTCTTTTAAAGCTGGGACGTGATTTTTTTTTGGTGAGAGATTATCATGTTGAAAGTGATGTTCTGCCACTTTCCCGATGACTAATTTTAAATCTACACAGTCCTCTTGATTTTTGGACCAAACAGATGCCCACAGTGGAGGCTTCCCAAGGGTTCCAATGGAGAAGAAGCCTCTCCCCCACTGTCAGCACCAGCTGGTAAAAGTGACTGTACAGATGTGCATTTTCTTTTTGGTAGAAATGGTTTGCAGCACTAACTGGTAAGGCTTATTGTACAGTATATTGTCAGTATTCTTCTGGTTCAGCATACCTTATAGTTCATATATAACCTGTATTAATTGTATAGATTGTGCATTTAAAGCTGTTACCAAGTTGTCAGAACATAAGAGCGAAAACAAGGTCATATGTAATATTTTGTTTGTAAGTATCCTTTGTATCATAGCAAAGGAAATGTTTAAAAAAAATCAACTGTAATAAAGTAATTTTAGTACACGGAGTGTCTGCTCAGTTTTTTTTAAGTAATTGTATTTCCATAAAATATATTTCAGTTCAATGACTGTTTATTGGATAATCACTGAATCTCAGGCACTGTGCTGGATGAGTGAGATGCGGCTAAAGATGAGCTCCCTGATGTCGGCTCTAGTCTAATTGCCTCAAATTCTGTGTACCCAGGCAGTGACGTAGCCTATTGTGTTGTGGCTGTGAGATACGATTCTAGTTTAGGTTCTAACGGTTTGATGCATGTTCTTAAGTTTTATACAAACGTATGTTGTGGTCTGTATTACTGCAGTTCCTCCCGTACACATGGACGCCCAGCTGTCTGTAGTTCTCGGACCTTGTGCAAAGAAAGCTTCTGAAGGTGGTTTCTTCTGGGTTTATCTTCCCAGATTTTAAAATCACCACATTTTAGCCCTGAATGAGGCAGATCATCTAATCCAGTCCTGTTAAAATGACTTTTTTATCAGAAGGCTTGGAGGGATGGAGTTTCATGGACTGGGGCTTCTATGTTTTTTTAATTAGTAGTTTTAAGTGTCATTTTAAAAAGCATTATTGAGATTACCTACTTTATTGAATTAGAAGACTATCAGAAAAGTGGCTCTTTAAAACATAGCTTTTAAACTCCTAGAATGTTGATATTGAGCTACTTTGAGATTAATTAGCATTTACATAGGGTTTAATTTGCCTGGGTCAAACAGCCAAGATTAGTTTCCAGGTGTTCTCTCTATCATTTCCAGCATCCCACCTTGAATTTGGTTGAGCTATTAAAAGGGATTTAAAAAACAAGATTTCTGTTTATATCTCCACAGTTGGGCTGTTCAAACTGCAGTGAAAGGAGACTATCATAAAACATGTGCTTCTAACCATGTCAGCAACTCAAAACACATGTTGTTATTGACCAAATGCATCAAAGATGCTCTGAGTTAATGCATAGGGTTTAAAGCCTATCCTACCTGACTATAAAAGAAATTTGAACAGAAATAAAGAATCAGCACAGTGGTCTGCTAGCTCCACACCCCCAGGGTTTTAAGCTAGCACTGTCATCTACATCTGAGTGATGAAAAACTGCTAAACCAGGGTTTTCCTGTTGCGTGTCCCAGGCAACTAGTGACTATATTTTCAGATACTTGTTCTTACAGATAAGAGACAAGGCCGCCAAGGGGGTGCTAAGGCTATGCAAACTGCAATAAACAACTTTAGGGACACCAATCATAGATACATGTTGACTCCATCACAGAGTTGTGCAGCAGCTCTGATAACAAATTCTCCTTTTGTTAACACCCTTTACATTATGGAGTTTAAGATGAGCATTACTTATTGTCATCTCAGCCAGTGATTGACTAGGAAAAGGCAAAGTTTGGCTTGAAGAGCAGTGGTTGGGGTTCTGGTCTTTAGCCCCGTCACTACTAACTGTGAGATCTTGAAGGGCACATCCTTTCTGACATCACTTATAAGAAAAAAGCAGATGGTTTTTTGGCTAGAACAAATGAACCAATGATAACGTTATCAGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACGCGCGTGCTTGGGAAGGGAGTGGAAAGAGTTTGCTTTCAACTGGGCAACCCAGCACTCAGTCTGTGAGCCTCAAAGGTGCTGCTCTTCCAGGTCCTTCCCTACTTTGCAATAGAATTAATAACTAGAACTTCTTGGCCTTATAAGAATCGGAAAAAAGATTCTGATCTGAAAGCAGATGTCACCTCATTACAGAGGTCTTTGAACTCTGATTGTGGAATTAAATGGACTTGCAGAACGGGATCCATCTGCTTTTATTATTTCATTTTAGCCTAACAGACCTAAATTAAGGCTTTTTCATTGTCTCATTGTTTTCATGTGGAATAATTCATAACTTGCCCAAAAGTCCTATGTGTCACTGATGAAGGAGAAACTAGAATCCACATCTCCAGAAACTATTGTGGTGCTC EMBV3_39622 ACCCCAGACCTCAGGCCTCAGCCCCAGCAGGTGGTGAACGCAGTCAACTGCAGCCTGTTC Variant GeneID:512498|MAF1:NM_001034424:62_cdna 596^761 1 EMBV3_01464 GeneID:512498 14 GENE MAF1 MGC127274 MAF1 homolog (S. cerevisiae) EMBV3_00078 CCAGCAGAAAATCAAAAACCAAAAGGCAAGCCACAACCCAAAGCGAAGACTGAAGGCCCC Gene GeneID:788870|ANKRD5:XM_002692038:42_cdna Constitutive 0 NULL GeneID:788870 13 GENE ANKRD5 NULL ankyrin repeat domain 5 EMBV3_42007 TCACTCAGGTCTCTGGGAGAATCCATAAGTGCCAGACTGTTCAACTTGGGACCTGCCCTG Variant GeneID:614757|C7H5orf45:NM_001167943:43_cdna 285^622 3 EMBV3_02905 GeneID:614757 7 GENE C7H5orf45 NULL chromosome 5 open reading frame 45 homolog EMBV3_41093 TCAGCTGTGCTCCAAAGAACAAACATGCGCCGGAAAGGGCCAGCCCAGAGCCAGGCCGCA Gene GeneID:530749|LOC530749:XM_002694105:400_cdna Constitutive 0 NULL GeneID:530749 16 GENE LOC530749 NULL hypothetical LOC530749 EMBV3_35718 TGTGCTATGGTAGTTAACAGTTTGGTAAGGGAAGGCTTGATGGAGGAGGTAGCCTGGGAG Gene BVT0102_152834 + 0 NULL GK000010.2:36127745-36140625 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013444 TCONS_00016783 TCONS_00013440 TCONS_00013443 TCONS_00013442 2 XLOC_008127 XLOC_008908 Coding TCONS_00013444 XLOC_008127 Coding Coding C10H15orf23 10:36121345-36132527 j TSS9985 6094 1 TCONS_00013444_2 225 0.339842468001313 8 0.455683749217422 0.00399266488112519 0.00365364131460541 0.00281990630553022 0.00211314406627134 0.00165680275924161 0.00105143995138951 0.00160232069290308 0.00165960431428429 0.00215891410453959 0.000202084232964806 4.02204073273758e-05 0.000104530648165703 0.000435214692311317 0.000531001281206862 0.000417767414516043 0.00103170624182613 0.000568130087234928 0.00094033842155078 0.000967378186008611 0.00184504348538555 0.000316278739990856 0.000633564115461791 0.00135305717653398 0.000558908273659286 0.00154322257478972 0.00133097868832037 0.000837710555982316 0.000277027885601822 0.000155798663562377 0.000477176015757165 XM_005211559.1 C10H15orf23 PREDICTED: Bos taurus chromosome 10 open reading frame, human C15orf23 (C10H15orf23), transcript variant X1, mRNA. 0.0 2192 100.00 0.199212340006564 NM_033286.3 KNSTRN Homo sapiens kinetochore-localized astrin/SPAG5 binding protein (KNSTRN), transcript variant 1, mRNA. 0.0 1236 80.57 0.215457827371185 TCONS_00013444_2 sp|Q9D9Z1|SKAP_MOUSE SKAP_MOUSE Small kinetochore-associated protein; 2e-109 321 77.78 0.946666666666667 0 coding 0 0 0 0 -0.0341788569209966 0.826457044398525 -0.145522285947086 0.0323641874149382 AGGGTTCAGCTGTGTTTTGCCTTGCTGGCAGCCACACCGCCTCTTGTGGTCTTTGCTTATATGAATCTCCACCTTCACAGCTACACCCTCTGGCCATTCGATGCACAAACTCGAGCCACTTTTAAGAGCCAGTTACCTGTTAAGTCCAAAGAAGTTGATGTTTCCAGACCTCATTCAGGAGCTTCAGAGAATGATGTTACAAAAATCATCAAACCGAGACGAGAGAATGGGCAGGTGAAGGCTACAGACACCTCCAGGAGGAACCTCAGGAAGAGCTACAAACCATTGAGTAAACAGAAATCGGAAGAAGAGCTCAAGGATAAGAACCAGCTCTTAGAGGCTGTCAACAAGCAGTTGCACCAGAAGTTGATTGAAACTCAGGGAGAGCTGAAAGACCTGACTCAAAAAGTAGAGCTGCTGGAGAAGTTTCAGGACAACTGTTTGGCAATTTTAGAAAGCAAAGGCCTCAACCCAGGCAGTGAGACCCTGGCGTCACAGCAAGACTCCACCGCAGATCACGTGGACTCCATGCTGCTGTTACAAACTTTGCAAGATGAACTGAAGCTTTTTAACGAAACAGCCAAAAAGCAGATGAAGGAGTTACAGGCCTTAAAGGTAAAGTTGAAAATGAAAGAAGAAGAGAGAGCCCAGTTCCTTGAACAACAGACCTTATGTAGCAATCAAGTAAATGATTTCACAACAGCCCTTGAGGAAATGGAGCAGCTATTAGAAATATGATAAAAGCAGGTGGCCACATGGCTCTGTCTTGGAGATAGACTCTCAGAGGAAGCTACCTAGGACATCTGCTTCTTGGCCATGATCTTCTAGGACTCACCATCCCCAGAATGAAAACAGTTTCTGCAGTAGGATTAAAGATAGTTGATGTTGGAATGGCAATTCCTCCCTTAAGCAAGCATTCGTTCCCAGCCTCCAGATTGTCCAGCTCTCCTGAACCTCACAGTTCATAATTAGGGCCTACAGGAGAGGAGGCCTGAAAGCTTGGATCAGCCTCCTAGGATCAAAAAGCAGCACATCATTAGCATCAGGAGACTCTAAACCAGCCACAACCAGAGAAGCCAAAAGATGTGCAGGAAGAAACAGTGAAGCATACATGCTCCATGGGAGACATAACTGAAGAGTCACGTGGTCCCTTCCTAACTTGGAACACATTCTGTCCCATCCTGACTGGGCTCTGTAACCTCACTGTAAATTTATGAACTGAAAGTTACCTGAAGTGGCTTAATAATGGGGTGAAGGTATAGATAGCAATAACAGGTATGAAACAATACACCTTGGAGCTTTTAATCTAAATCATTTCTGTGTTGTTTTTTTTTTTATAAAGTGTTACTTTAAATAAATATTTCTGTAACTATTCAGACTGCAGCATTGACAAATGAAAATAGCTTTTTAATCTAAATATGGCCACTGAATACTACTGAACTAATCTGTTAACAAGTTCAAGGTTACAGTTTCACCCAGAATGTTTTTCTTCTATTTAACCCAGAGTATTTTTCTTCTACTCATTTTAAGTGCTCTATGACTGGCCCCCTTCCCCACCCCCTCTTCTGTGAGCATTAGTCAGTCTTCTGTGGGTGTTCCCTGTTTGCAGCAGTGTGTGCCAGACTCCTTCCACCAGGTTTGTGTCACCAGCTGCCTGTATTCCTAAATATGCTTAATCTCTGCTGTTGCCTTGCATGGCCAATCCTGGACCTGGCCCGCTGGATTATTAGTCAACTGAAGTCCACAGCAGACCTTCTCTCCCCCTCCTTCCCCCATGGTTCACCAAAGGTGCAGCTATAATTCCTTTTTTTTTCTTACTGGATCCCAGTTCTCCAACCAGGGATTGAACCCGGGCCCTCAGCAGTGAAAGTGTGGAGCCCTGACCACTGGTGTGCTTGGTCATTCAGTCATGTCCAACTCTTTATGACCCCATGGACTGTAGTCTGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGATCGCTGGAGTGGGTTACCATGCCCTCCTCCAGGGGACTTTCCAACCCAGGAATTGAATGCAGGTCTCCCACATTGCAAACAGATCCTTAACATCTGAGCCACCAGGGAAGCCGATAACCACTGGACCTCCTAGGAATTCCCCATATTTCATTTCTTAGTCAAACTAGGCAGACTTTGACTTTAGCCATCTCCCATTTTTCCCTGGACCTCCCAATTTCTTCACCAACTCCCCCTACTCTTTATTATTACTGGAACTGTCCAGAGGCACCCAATCAACTCAAGTAACATCCCACCCTAATATATAGGGTTAAAATTCTTTGCCTTCATGCCCATATTGCATTCACACAGTTGATTATGTCTCAAATATTTTGACGGGGAAACCCAGTTAAATAATTCACAGAAGAGCTGGATATTCTAACCATTTTCAGAATGTTTAAAAGGTTATTTGAAAGAAAAAAAGTGAAAGTGTTAGTTGCTCAGTTGTGTTCAATTCTTTGTGACACCATGGGCTATAGCCCACCAGGTTCCTCTGTCCATGGAATTCTCCAGTCAAGCATACTGGAGTGGGTGGCCATTCCCTTCTCCAGGAGACCTTCCTGATGCCGGGAATCAAACCCAGGTCTCCTGTGTTGCAGATAGATTCTTTACCATCTGAGCCATCAGGGAAGCCCCAAAAGGTTATTTACCCAAGTGAATCTGTAATTGGCGTTTCTGGTCCCCTTAAGAGTTCTACTTGCTTCTTGAGAGAAAGGGTAGGAAACTCAGCTGTGAGATCCTCACCTCCTTGTCCTGCCTCCCTAGTTAACTCCTAAGAATGAACCTATGTCAGCTCCTCCATGACTCATTTTTCCCAATGTACACACCCTGTTAGCTCGAGGCCTGGCCTCACAGGGGCCTTTTGCCCCACAGTTCTGCTTTGCTCCACCAATCAGCATTTGTGCACTTTGCCTTTTCTCCTGTGCCCTCTAACCTCTGCTCCATCTCCCTTTTGTACATGTGGAGGTATGTGGGTGTTTAATCTGGTCTGGAGCCTGAATAAATTCATGCATTACCTGAACTCCTTGTGATTTGCAACCTCCACGTTGCTAGTTGCTATAGGAAACTTTAATGTCACGTGACATTCTTAACCTCAAAGATGCTTGCAGTACACGCAACGAAACATTGCACAGGTGACATAAAGGTAAATAACAAAAGCAATGATTTATTACACAGTGGGTCCTGTGATGTGGTTATGTGCTATGGTAGTTAACAGTTTGGTAAGGAAAGGCTTGATGGAGGAGGTAGCCTGGGAGTTCACGGAAAAGTAATACTTGGAGAGGTTAGCTAGAGGGTTGAGAACTTCCCAGGTTGATGAATGTGCGGAGATTAGGGGAGAGGAGCGCACACAGGACCTTGAAGCTTCATGCCTTTTCCGCCTGCCTTGCCCCGTGTGTCTCTCCCATCTGGTTGTTACTGAGTTATATCCTTTTATAATAAACCAGATCTGAGTCTGTGAGCATTCTAGCGAGTCAAACCCAAGGAAGGGATAATTGGAACTTCCAAGGAGAAAAAACTATGAGAGATAGAGGAAAAAAAAAAAAAAACACTTGAGGGAATATCCAGATGAGTCTTGAAGAACTGAGTAAGAACACTGATTGGGCTTGGTCAGAGGGTTGAATTTAAGAGATTAGTTCTGATGCTTAAGGGAACACTTGTAATATACTATATGTGATGTTTATTTGTACATGTTTATGGGTACATGGTGTTACTAGAAGTTTTGAAGAACCTTAAGTTCTTCAAAGGCAGGCCAGAGGTTTCCAAACTGTCTTAGTTCAGTGTTCCTAGTATCTCAATATTTTATGACATGCCAAAATAAACATGTAAAAGTTCTATTTTTTTAATATCAAAATGATAAGCACTTAATGTCTGAACAACTTAATAGATATTTGAAAAAAGAATACACAAAAATCTAAAGGTATTTTTATTTTTAAATAACTGCAGTTATTACTAACAAGATGTTGGGCACCTTAGCTTCTCAGACCTTGGAATCAAACTGGACACTACCACCTTTCTTTCCTGTTTGATACTGAGAGGAATATTGCATGATCTAACCTTGAAATTAGCCTTCTTCAAGCTAGTAGTTCACATGTTGTCTAATATGTATCACTACGATTTCCCCTAAAGTTTATTCTGTAGCATCCCAGGGAGCTTGCTGCCCAGTGGTGTCGTGGATCACAATCTGGGAACCATTAATCTAGGTAATAATGACTCACTAACACATTTTGATCAGGTAATCATCATAATGAATGTTTAGAAAAATTAATCTAGCACTGTATGAAAGATGGATGGCAGGATTAAGAGAATAGGGTCAAAGACATCGGGAAAACAGGAATCAAATATATTAGGACCATGACAGCAAAGGTATAAAGAAAGATTTGACCACTATGGGGAACAGCATGGAGGCTCCTTTAAAAACTGAAAATAGAGCTACCACATGATCCAGAAATCCCACTCTTGAAGCGATTTAGCAGCAGCAGCAGCCAGACTTTGGTGCTGGCCATAGTTCACTTTTACAGCAATCCATTAAGACAGACATTATCTCTACTTAACAGGTAAGAAATTAGACTGAGAGAATTTGCAAAAGACCAGTTTTTAGTGAGTAGGCTGGGAATGGGCTGCAAGCTGGTTTTTATATCCTAATTTTATAACCAATTCTTATTCTGTCACCCTCGCTCAAAACCTTTATGTATGTAGATTCTTTCCCCCCACACCCATATGCCATCAACTAAGCCCACCAGGCTTCCCTGTCCCTGGGATTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTCAAAGTAAAGTCTCTCAGTCGTGTCTGACTCTTAGCAACCTCATGGACTGCAGCCTACCAGGCTCCTCCACCCATGGGATTTTCTAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCGTCTGGCAGAGGTACTCAAATCCTGATGATTATTGATAAAGCTCAAAATGTACCTTGGCAAATGATAATCTTCTTAATCTTGCCCTTTAACTTTCACTACTGTACACTATATCCTTCTTACTCTCTTCTCTCTTTGTCTCTGGCTCTCTCTCCTTAGTTCCCTGATTTTACCTTGTATTGGCAAGCCTCCAATACTCAATATCCCTCTCAACTGGGAACTCTCAACTTTAACTGGGGCTCAAATTACAACCACCTTAAAAAACAAAGCACCCACTGCCATTCCCTCCAAGTTACTACCTACCCTCGATTAACAGTCAGAAGTCTCAAAATTAATAAATGAATATTTTTTAATTAAATAAATTGTTTTATCATTCCAGGACTTTCTTGGCAGTCCAGTGCAAGACTTTGCCTTCCGATACAGTGGATTTGGGTTCCATCCCACATGCTTCGAGGCCAAAAAAACCTAAATAGAAAATAGAAACAGTATTATAATAATTTCAATAAAGACTTAAAAAAAATTCCACATTAAAAATGAATAAAGGGAATTCCCTGGCGGTCCAGTGTTTAAGACTCTGCTCTTCCACTGCAGGAGGCCCAGGTTCCATCCCTGATTAGCAAACTAGGATCCCACAAGCTGTGCCACACAGCCAAAACAAACAAACAATCTCAAGAACTCATTGTTCTCTTGCCTTCCAATTTGGCTTAAAAGCGAAAACGATTTTATAAGGTACCTAGAGTTGGCAAATTCAGAGGGACAGAAAGTATACAGGTTACAGGTTACCAGGGACAGAGAGGAAAAGTGAAGGGGGAGTTATTTTAACATCTGCAGTTTTTGTTTGGCATGATGAAAAAGTTCTGGGAATGGACAGTAGTGACGGCTGCACTGTATTGTGAACGTACTTAATGCCACTGAACCGAACACTTAAATACGGCAAATTTTATGTATATTTTACCCTGGCTCAGATGGTAAAGAATCTGCCTGCAGTGCAGATGACCCAGGTTTGATCCCTGGAGCAGGAAGATCCTCAGGAGAAAGGAATGGCTACCCACTCCAGTATTTTTGCCTGGAGAATCCCATCAGCTATAGATCAAAGAGTCAGACATGACTGAGTGACTAAGCACCACCACCACTAGAATTTTAAAATAAAATGTAATGAG EMBV3_00094 GGAACCTAGGAAAGCACAGTGTGACTGGAGGCAGAGAAAGTGTTCATGGTGGCTCGAGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18431 ACCAGGTGGAGAAGTTAACGACACAATGACCAGACCGTACCCAGGACATGAGTTGCCACA Gene BVV0102_249194 + 0 NULL GK000015.2:78774449-78787618 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060169 TCONS_00060170 1 XLOC_036601 NonCoding TCONS_00060169 XLOC_036601 NonCoding NonCoding - 15:78774486-78780056 - TSS45010 473 1 TCONS_00060169_2 78 0.765327695560254 2 0.915424672293051 0.000371103788365368 0 9.78223799697697e-05 3.51126843793584e-05 1.04380081556773e-05 0 2.46583989549816e-05 0 0.00011676733201204 0 3.04669356476662e-05 2.80991696708595e-200 0 9.94504583609576e-06 0 0.002528958364901 3.50999432151446e-05 0.000290624859598723 0 0.000167242509309444 1.21234053236771e-05 0.00169435988050519 0.000504282292278986 0.00719497095594959 0 0.000406144239355389 2.66930763189952e-05 2.4890182277888e-05 0.00135990583853229 0.000143409074656086 XR_230469.1 LOC101909432 PREDICTED: Bos taurus uncharacterized LOC101909432 (LOC101909432), 2e-49 199 72.46 0.769556025369979 0 noncoding 0 0 0 0 -0.1300884782837 0.433133731690568 -0.0140615544433207 0.759111770718518 GGGTGTCGTCACTTCCGGGGGAGGAGCAGGCGGGCAGGTGGAGAAGCCCGGAGAGGTCGAGGGCCGCCGGATCCTGCGTTGTGAGGCGTCCACCGAGTTAGCTGGAGACCAGATACTAAAACACCAGGTGGAGAAGTTAACGACACAATGACCAGACCGTACCCAGGACATGAGTTGCCACAATTCCAAGAATTGGCCACAAAGAAATGAAAACAAAGGGACCCTGGACCTGAAGATTAATGGTACTGAAAACAATCAAGATGATGCTGGTCAGACCACTGATGACCAATCTGAAGATGACTGTTAGAGATGACTGTGCTGTTTCTGCATATAGCCACCGCCCCCCTTTGTCTATAAAAGCTCTCACCCCATTCTCGTGGAGGGGGTCGGGGGAGTTGGCCTTTGGACAGATGTCTGCTACCCTCCCCCAACAGTTGCCAGAATCTGAAATAAAGCAAACTTTCCTTTCCACC TCONS_00062509 r 5' 0 TCONS_00062509 r 5' 0 EMBV3_40390 AGTGAGGAAATTGTTCCCAATAGTGTTGAGGAACAGCTTCTCAGACTGAAAAAATACAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03877 GAGCCAGGCACACAGTAGGAACTTTTCACATTATTTCTGAAGAGCAGGTGGTTCCGAAGG Gene BVT0102_044810 + 0 NULL GK000020.2:3159622-3535865 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38004 CCTTTACTGATCATTCCTTCCTGAGGTTTTTCCCCCTAAGCAATACGTGATATGTACCCT Gene GeneID:505144|CHORDC1:NM_001045912:26_cdna UTR3_Alt 3 NULL GeneID:505144 29 GENE CHORDC1 MGC137302 cysteine and histidine-rich domain (CHORD)-containing 1 EMBV3_06755 GGCATCGTCGTCGGCATCCTCATCGCCCAGTGCTGAAGAAGCTGCGTGGGACCGCGGACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20362 GGAGAGATGGGGAGGCGTGGCGCTGGGGCTGAGTTGGATGGCAGCGTAATTCCGAACGCA Variant GeneID:514334|ZPBP2:NM_001075661:130_cdna 88^196 3 EMBV3_36411 GeneID:514334 19 GENE ZPBP2 NULL zona pellucida binding protein 2 EMBV3_23505 ACAGCACTGAAGCAGCTGACACAGATCCGCGAGTACGAGCAGCGTCTGAAAGGGCTGGAA Gene GeneID:100295930|LOC100295930:XM_002695205:910_cdna Constitutive 0 NULL GeneID:100295930 18 GENE LOC100295930 NULL similar to transient receptor potential cation channel, subfamily M, member 4 EMBV3_20302 TGAGGCCACAGGAGGAAACACAAATGAGGCTTGGCAGGAGGAAGTTTATTATGGGTCCGC Gene BVT0102_004755 + 1 EMBV3_34274 GK000002.2:122154155-122169393 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19105 AATGTTAGGAAAAGTGGCAGGAAACGAAGGTGAAGTAACTGCCAGGACCCCATCGTGCAG Gene BVT0102_260452 + 1 EMBV3_14952 GK000002.2:111821121-111987823 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38784 CGATATGTCGGAGGAGATGCAACAGGACTCGGTGGAGTGTGCTACTCAGGCATTGGAAAA Gene GeneID:783832|LOC783832:XM_002683734:2_cdna Constitutive 0 NULL GeneID:783832 12 GENE LOC783832 NULL similar to dynein light chain 1 EMBV3_33141 CCAGTTGGGAGGAAAAGGACATGGCAGAAGCGTAGCTGATGGTGAGCACTGGTGCCTTCA Gene GeneID:516012|CCDC134:XM_002687949:36_cdna Constitutive 0 NULL GeneID:516012 5 GENE CCDC134 NULL coiled-coil domain containing 134 EMBV3_31897 TGTCACCCAGTATGCTGTGCTTGGTGCAGGGCTCTACTTTGGGGAGATCAGCATCATCAA Gene GeneID:516000|CNGA4:XM_002693174:132_cdna Constitutive 0 NULL GeneID:516000 15 GENE CNGA4 NULL cyclic nucleotide gated channel alpha 4 EMBV3_11287 TATGGTAACAGATGTTCATAGTCAGTCACAGGGTCTTGCCACGCCATCAGCTCCGTGTCG Gene GeneID:524776|LOC524776:XR_083840:521_cdna Constitutive 0 NULL GeneID:524776 13 PSEUDO LOC524776 NULL similar to chromodomain helicase DNA binding protein 6 EMBV3_06240 TCAGTGGTTTGTTTTCCATAAGCATGCAATTGATCATATTTCTGCCAAGGATGTGCCTTC Gene BVV0102_281774 + 1 EMBV3_02251 GK000030.2:79356208-79402955 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28640 GCAGCTGGGAACAGAAATTAAACCTATCCCGAGCAACATTGACAAGAGCCTGTATGTGGC Gene GeneID:513906|DDX6:NM_001143867:110_cdna UTR3_Alt 2 NULL GeneID:513906 15 GENE DDX6 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 EMBV3_26548 CCTGCTGTGTGAGACCTCTCTGGGCTACAAGATGGATGACCTGCTGACCTCATATGTGCA Gene GeneID:522053|MYO7B:XM_002685213:86_cdna Constitutive 0 NULL GeneID:522053 2 GENE MYO7B NULL myosin VIIB EMBV3_02034 CCCTGCTTAGGGGCGGGATGTCGCTCCGAGGTCGGGGTATGATAGGTCGGGGAAGAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_24783 TCCGGTCTCAAAGTGACGTGCTTGAGAATGTTATCCTCTGCGTCTCTGACCACTAGTGCT Gene BVT0102_341613 - 1 EMBV3_16260 GK000007.2:103932552-104321914 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00214781 TCONS_00214780 1 XLOC_130767 NonCoding TCONS_00214780 XLOC_130767 NonCoding NonCoding - 7:104241014-104295276 - TSS160563 879 2 TCONS_00214780_2 49 3 0.983855808038923 0.00018123171741568 3.00423060207593e-08 1.70695304912203e-10 0.00085025420495233 0.00020428268750278 1.62776987995913e-05 0.000139323811519666 0.000251100744517718 5.60590364197464e-10 0 0 0 0.000525546023273258 1.0702872004855e-05 0 0 0 0 0 4.90880686842552e-05 0 0 0 0 7.88191829406849e-06 0.000593132582062513 1.33313702488407e-05 0 0 0 0 noncoding 0 0 0 0 0.0634016812308898 0.68356729711515 0.0038370924305086 0.935538511785761 CTGTGTGAATGAGCCGGGGTTTGTTTAGAAGCTGAAGAAGGTAATAGCTAGGCCACTAGAGACCAAAATGTGAGATCTGGTATCCCTGAGTTTTGAATAACACTGTCGTTCATTGATCCAGCATTAAGCCATCTGACTCACAGGACCCAGCAAATGAGCCTGGCTGGCGTGCCCTGCTTGATTTCCTAGGAAAGACACAATCTGTCACCCTAATCAATATTGCTTGACTTGAGGCCAGCAAAATAGTTTCTGTAGTTGTTTATGTCCTGTATTTATCTAGAGTTTTAGCCAATTCCTGGCATATGAACCCATCTGTACTAAGCACAAGATAATTTATATCTAGTCGTGGGTTTTAAACCTTCTTTGATGAGCACTAGTGGTCAGAGACGCAGAGGATAACATTCTCAAGCACGTCACTTTGAGACCGGAAACCTGAAATTACATCTTGCCGTGGTTCTCTCAAAGAAAGGAGATGGAAAGAAAACCAATCGTTCTCCTTCTTAGTTTTGGAATAACTTTCTGGAGGAAAACTAAACAGTATCTTAAGACCCTTATTTAGAAGAAAAAGACTTGTGGATCACCACACATTTCTTTGCAAGAGGTTTCATTTTGAGTATCTGATTGTCATGTTGACCTTGGGTGGGAAGTAATTAGACACGCAAGACTGAGCAACTGGATGGTTCAGCCTTCTTGCATCTGTGACTTGCTTCCTGGAAGGAACACTGGAACAGATGTCAAACTACAGTCAGGTGACCTCAATCCTGAAGACTTTCTGCTATCAACAGCTTCCTGATTTTGCATCTGACCTGGCCCATCTAGACCTGAGCAGAGAGGCTTCAGAGGGAACAATGACCTGGAGAGCAGAGGTTCTTCAACCTG TCONS_00214778 TCONS_00214779 s 3' 12910 TCONS_00214778 TCONS_00214779 s 3' 12910 EMBV3_24037 GGAGAAAGGGGACTGGTCATCTAAAGAGAAGTATGTGTGGTGAACTCTGACGTGGACTGC Gene GeneID:615226|GRIK5:XM_002690152:2_cdna UTR3_Alt 2 NULL GeneID:615226 9 GENE GRIK5 GRIK5 glutamate receptor, ionotropic, kainate 5 EMBV3_13396 GCTAGAAGCCTTTTTGAGAGATAGTGAGCTCAGGATGTTAGGGGCAAAACAGGATTTAGG Gene BVV0102_154970 + 0 NULL GK000027.2:3151921-3522812 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19267 CGAGCATTGTTTTTCTCCAGATATGTGCCCAGCAGTGGGGTTACTGGATCATATCGTAGC Gene BVV0102_064620 - 0 NULL GK000012.2:67325681-68231886 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040725 1 XLOC_024541 Coding TCONS_00040725 XLOC_024541 Coding Coding - 12:67786946-67787947 - TSS30226 1001 3 TCONS_00040725_3 48 0.997002997002997 1 0 0.000584459709963988 0.000230882534355467 0.000166405486376485 0 1.47967465721411e-05 0 0 5.31793322058712e-05 3.54701537446321e-05 0 0 0 0 0 0.000142137667112517 0 0 0 3.94006541499152e-05 0.00014512177205853 2.42615596438535e-05 0 0 0 0 2.1115299614643e-05 2.34131685417591e-05 0 0 0 XM_001788594.4 LOC538808 PREDICTED: Bos taurus kinesin family member 7-like (LOC538808), 6e-137 491 72.07 0.919080919080919 NR_026777.1 ZNF37BP Homo sapiens zinc finger protein 37B, pseudogene (ZNF37BP), 5e-68 262 72.01 0.507492507492508 TCONS_00040725_1 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-08 50.8 58.82 0.942857142857143 0 noncoding 0 0 0 0 -0.0223079297768635 0.84489889353355 0.00253758698134979 0.965322387199215 CAAAGGAAACTGTAAACAAAAGGAAAAGATAACCCACAAGTTGGAAGAAAATATTTGCAAACAATGTGACTGACAAGGAATTAACCTCTGAAACAGCTCATATAAAAAAGACAACCCAATCAAAAAATGGGCAGAAGGCCTAAATAGACATTTCTCCTAAGAAGATATACAGATGGCCAAAAGGCACATGAAAATATACTTATTATCTCTATATTAGAGAAATTCAAATCAAAACTACAATGAGATGTCACCTCAGACTGGTCAGAATGGCTATCATCAAAAAGTCCACAAACAATAAATGCTGGGCAGGGTGTGGAGAAAAGGAGACCTTCTTACACTGTTGTTAGGAATGTAAATTGGTACAGCCACTATGAAGAACAGTATGGAGGTTCAATAAAAAAAAAAACCTAAAAATAGAGCTACGATATGATCCAGTAACCCCACTGCTGGGCACATATCTGGAGAAAAACAATGCTCTTTACGTATACATGCACCCCAATATTCATTGCAGCACTGTTTACAATAGCCAAAACATAGAAGCAATCTTAATATCCACTGACAGAGAAATGGAAACAAAAAGTGTGGTACATATATACAATGAAATACTACTCAGCCATTAAAAAGAATTGAATCATGTCATTTGCAGCAACAGGGATAGACCTGGACATTATCATACTAAACGATGTCATACAGAGAAGGACAAATGTTGTGTGACATCACTTATATGCAAATCAAAAAAAAGGTACAAATGAACTTATTTATGAAACAAAAACATACTCAGAGAACAAACTATAGTTATCAGGTGGGAGAGGTTGGGGGGATAGATTGAGAGATTGAGATTGACATGAATACATGGCTCTATTTGAAATAGATAACCAACAAGGACCTTCTGTATAGCATTAGAACTCTGCTCAGTATTCTGCACTAACCTAAATGGGGAAAGAACTTGGGAAAAGAATAGATGCATGTGTATGTATAACTGAATCACTTTGCTGTACACC TCONS_00035522 . 5' 443940 TCONS_00035522 . 5' 443940 EMBV3_43434 TCCTCTAAAAAGTCCTACGTGTGCCCTAACTGTGGCAAAATCTTCCGCTGGAGGGTCAAC Gene GeneID:526480|ZNF496:XM_002689056:32_cdna Constitutive 0 NULL GeneID:526480 7 GENE ZNF496 NULL zinc finger protein 496 EMBV3_40852 ATGTGAAAGACCTGAGTCGCCTTGGGCGGGAGCTGAGCAAAGTGATCATCGTGGACAATT Gene GeneID:538425|CTDSPL:XM_002696942:513_cdna Constitutive 0 NULL GeneID:538425 22 GENE CTDSPL NULL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like EMBV3_02426 GAGAAAACGAGGTATGCCTGTGACCTCCTCCAGTTTGTAAATGAGAGAGTTGAGACCCGG Gene BVT0102_031603 + 0 NULL GK000015.2:40237675-40303469 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00061212 TCONS_00061215 TCONS_00061218 TCONS_00061222 TCONS_00061221 TCONS_00061210 TCONS_00061211 TCONS_00061223 TCONS_00061220 TCONS_00061219 TCONS_00061207 TCONS_00061208 TCONS_00061224 TCONS_00061216 TCONS_00061214 TCONS_00061209 TCONS_00061206 TCONS_00061217 TCONS_00061213 1 XLOC_036946 Coding TCONS_00061207 XLOC_036946 Coding Coding TEAD1 15:40295839-40374836 j TSS45621 8981 1 TCONS_00061207_1 305 0.0999888653824741 10 0.886437287963947 0.00127607057650461 5.76922904585517e-18 2.4464743325916e-13 1.48648567137499e-18 0.000173248431429548 3.51404004845339e-21 1.22829217179583e-09 0.000232868867683631 5.58769505513699e-06 0.00030430078433827 5.65669140788331e-27 1.21314967370701e-12 0.00010747603625022 5.63178559639597e-26 6.01108267916188e-07 0.00100541070161246 0.00153037999939413 5.67012041259696e-05 0.000538833876936254 0.0006806215494186 0.00045131839354837 0.00163325747687451 0.00163997420558661 3.42606926088493e-07 0.000255938828426629 0.00150146771124596 8.78255665547823e-09 1.33416352606063e-23 3.06547626769521e-05 9.40002558249814e-05 XM_005194600.1 TEAD1 PREDICTED: Bos taurus TEA domain family member 1 (SV40 transcriptional enhancer factor) (TEAD1), transcript variant X3, 0.0 1.613e+04 100.00 0.995768845340163 XM_005253092.1 TEAD1 PREDICTED: Homo sapiens TEA domain family member 1 (SV40 transcriptional enhancer factor) (TEAD1), transcript variant X3, 0.0 4408 80.56 0.528671640129162 TCONS_00061207_1 sp|P28347|TEAD1_HUMAN TEAD1_HUMAN Transcriptional enhancer factor TEF-1; 0.0 646 100.00 0.99672131147541 1 coding 1 0 1 1 -0.013940584565582 0.902192246524241 0.00147226509585553 0.985572648858631 GGGTGTCTAGTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTGATTTTCATTCCAAGCTAAAGGATCAGACTGCAAAGGATAAGGCCCTGCAGCACATGGCCGCCATGTCGTCAGCCCAGATCGTCTCGGCCACTGCCATTCACAACAAGCTGGGGCTGCCTGGGATCCCACGCCCCACCTTCCCGGGGGCGCCGGGGTTCTGGCCAGGAATGATACAAACAGGGCAGCCTGGATCTTCACAAGACGTCAAGCCCTTTGTGCAGCAGGCCTACCCCATCCAGCCAGCAGTCACGGCCCCCATTCCAGGGTTTGAACCTGCGTCAGCCCCAGCTCCCTCGGTCCCAGCCTGGCAGGGCCGCTCCATTGGCACAACCAAACTTCGCCTGGTGGAATTCTCAGCTTTCCTTGAACAGCAGCGAGACCCAGACTCGTACAACAAACACCTCTTCGTGCACATCGGGCACGCCAACCATTCTTACAGTGACCCATTGCTCGAATCAGTGGACATTCGTCAGATTTATGACAAATTTCCTGAAAAGAAAGGTGGCTTAAAGGAACTGTTTGGAAAGGGCCCTCAAAATGCCTTCTTCCTCGTAAAATTCTGGGCTGATTTAAACTGCAATATTCAAGACGATGCCGGGGCTTTTTATGGCGTAACCAGTCAGTATGAGAGTTCTGAAAATATGACAGTCACCTGCTCCACCAAAGTTTGCTCCTTTGGGAAGCAAGTAGTAGAAAAAGTAGAGACGGAATACGCAAGGTTTGAGAATGGCCGATTTGTCTACCGAATAAACCGCTCCCCAATGTGTGAATATATGATCAACTTCATCCACAAGCTCAAACACTTACCAGAGAAATATATGATGAACAGTGTTTTGGAAAACTTCACAATTTTATTGGTGGTAACAAACAGGGATACACAAGAAACTCTCCTGTGCATGGCCTGTGTATTTGAAGTTTCAAATAGTGAACATGGAGCACAGCATCATATTTACAGGCTTGTAAAGGACTAAGCGTGGTTATTTATATATATAGATATCTGTATATACACACACACGTATGTGCACACACACACACACTCTCTCCATGATCGAACGACTGACTGTAAACCTCACCATGCAGGGGTGCTGCCCTGGCCCTGAGGTCACCCCGATTTTTCTAAATCCTGTTTGAAGTCATTTTTTCATGTGTTCATACTCATTGTAGCTGTGAAGTTCTGGTACAGTTGTAAAAAGAGAAATTGAGTTGTTTCTGTGTGTTATTCAGATCCACAGCCCACGATTCCTCGGAAAGGTGAACCTTAAGAACCCAAGTCTCTGTCTGCAGAGACCTGTTTCTCATTGTGGTAGGAAAAAAAATTGAGACAGAGCATTTGCCATTGGACATTTACAGCGTTTATACAAATGTATTTAGTGTGTTTTTTTTTCCAACATAAAATTCTTGTTTTAAGATACAAGTAAAATTAATCTTTAAATATAAATGTAAATTAGTACACAAAACTAAGAATCTTTAGACTTATCTTTGTAACTAATTAGGGTGGAAGTTATGAAAGAATGTAATTCACTAAATTATTTTTTAAATGAAACTCTTCTTTCCTTTTGAAACCAAATGTTAAAATATAGCCTTAAGAAATACTTGGTAGAAATATCCTAATGAGACAAATTTGTACTTTTTTCCTCAAGGTTAAAACTAATCTCCTAATCCATTAAACTCTTGAAACAGGTATTACAGAGGAAGAAAACTTCACCCCTTATCCTTAACATATATAGTATATTTAAAAAATATAAAATTGTATTGTACTAATGTGATGATTATTTAATGAAAAAAAAAAGATGGCTCTTTTTGCAATAAGTAGATAAATACTGAAAATCTAAGCTTACAATGTTTATAGTCTTGTGTGTGCAGTTATATTTTATATGGACAACCAAATTTTTTTATTAAGATGAGTAAATATTTGAACCACTGAAATTTAATAACAAAAATTCAAAATTGGCATGAATACTGCACTGTGAGCTGCAAATTATGGAAAACCCTGTGGCTGGGAGAAATTTCATCAAACCAAACTTGCAAAGGCTCATCAGTTTTAGGATTTCTGCTCCCCAGAACATCACAAGCATACTCACCAGCCTGTGGATAAGTTATTTCTGGTGATCCAATATGCATATTAACCTGTTGTAACTATGTGTGTGTGTGTGTGTTTGTGTGTACATACACACATATACATATATAGTTATTCAACACTTATTTATTGAACATCTGTTCAGTGTCACTCAGTTTGCTAGGTGCTGATATATGTATTTCTCAATCTGTGTCCGTAGATCTTGGTGTATTCTCTAAGGACACCCATTTTCTTGACATCTCTCAATAAGTCACAATACTTAGTTGACTGAGGCTGAAGAGGCTCGGCTATCTATCTCTGCCCTTTCCAAACAGGTTCATTTGGGAGGTTTCCTTCCCGAGAGAGATTCAACTTTCCAACCCATGTATTCCAAAGCATTGTCCAGGCAGAGATGGTTTGGTGTGGTCACATGTCTTGTTACTTCCATACATTGGGAAGGGGACAGGGCATACTCCCCACTTTCCTGGAGGAAATTGACTTGTTGATAATCGTCAGGAATGTTAACACTACAGAACATGAAATGTCTTGCAAGTTTTAAAGCATGTCAAGACTTTTACATCAAGCCAGAAAAATAAAAAAAGACTTTGTACTGTCACATTCAAGTAACCTACACACCCTCTTCCCTTTCCCCTCAACCAACTGTGACCCTGCTTATGTATTGGCTAGTATCTGAGGTCAGGAGCATGAGGGTGTGGCTGGCTTGTGGAAACAGAATGCTGAACCAAGCCTGACCGCACCCAAACCCATGACCCTGGTCCCTGGGAAGACCAGAGGAAAAAGTGCAGAACTTTCCCCTTTTGGAATGCACATCCCTTACGTAAGCCAGCAGGATGGTGTGCATCTTCCCTCCATAAACAGACTACAGTTTGTTCCCTGATTCTGAGGGGACCTTTGAAGAGTTGACCCAGCGGCCCACCCTTCCATCTGGTCTTCGGCCCAAGTATTAAGCTTCTCCCTTGGTCATCATACTTATGACTTCTCTTGGTCACCCCTCTTCCAGGTGCTTCTTTTGCTCCCATCTCCTGCATCTTACTGAAAATTACCCCCAGTCTTCTCAGGACCTAGGGGTGCAAGTGATCTTATGTGGCTAAAAGCCAGGCCATCCCAGAACTTCAGGGGGAGAGGTATTTGGTTCACGTTCTCTCCCAGGAATGGAAGTCTTCCGTGCTGCCAGGAGGGCTCTTAGGATTTACTTTTTTCAAAGCACAAATAGACTGAGACCCTGAAACACCAGCTAGAGACTAGTTCTGTTAACTAAAGAGTAGGTCATACCCTGGCCTCACAGAGTCAGGCTGGGCCCTCTGATACTTGTCCTCTTCCTCCAAATGCCTTTGTAGTTGAGTTTGGGGTCTCCACGGATGACCTTGAGGGTTACTTTTTGCTCTTAAAACAAGTTTGCTTCTTGTCTTGTTCTAAAGGTTTCTTCAGGGCAGGTAGTTTTCCTGTCTTAACCACTGGTCCATTTCTCTGTCTCTTCTAAATTAGACCCTGGAATTAGATTTGTGTGACAACATCTAATCCAAGTCTGATTTTTGGTCTTTGACCATTCATGGCAGAGTCTTATTCATTCATCAAGCTTTCTGAACCGTAAAGAAGCCTTTCCAAAACTCTGTCCTCACAGCTGTCTTCTGGGTGCTCCATCTCCTGGTTGACCCTCCACTACCAGGATTGATTCAGGGACATCTTGTGCTTTCACTGGAGAGTTTGGAGGCCACTTTCCACCGCCTGAGTGGGGAGAAACTAAAGAACTGATCTTTGGTCTCTTGGCATTCATTTCCCATCTTAGCAAGAGACCTAAGTAAAGTCGAGGTTTTTTCAAAACATGTCCTAGAATCCCAGAATGTCTAAGCTACCCTAGACCAGGGTTTCTCAACCCTTTCTAGACCCTGTTGACATTTGGACCAGATACTTCTTTGTGGTGTAGGGCTGTCCTGTGCCTTGTAGGAGGTTTCGCAGCATCCCTGGCCTCTGCCCACTAGACACACTCTTTCCCCACTTGTCACAATCCCAAGTGTCTCCAGACAGTGCCAAATGTCCCATGGGCCACAGAATTGCCCCTGCTTGAAAAGCACTGCCCTACATCCAAAGGTCACAAATGCCATATTTGACATCTTCTTTTTCCTTCCATTTTATCCTGAGAAAGCTTCTCTCCTGGGAGCCTTGTTTCAGGCCATCAAGAGACAGGTAGGAATATTACTCAAATGACATTTTGTCCATGTTTCTTCCTGTTTCAGAGCTTCTACTTCACAACAGAGTCTCTCAGCTACAAGTATTCTTTCCTTCCTCCCTGGGGAAATTGGGGACAACTGGTTACCAACATCCCTATGATCAACTCATACTGCTTAAAGAGCATTTCTAATTTGCTCTTGATTCCTTATTTCATCTGGTTAGAAAATGCCACCTATTTTCATTATTTCTCATAAGGTTATTGTTCTCATAATCAGACCTTTGATCATTTTAGTGAATTTCTTCTGGCCTTCTACTTTTAGCGTTAGACTCAATGTTTTTTGTAGAATTTATAGAGACTTCTGGAACACTTCATCTTTAAGGATGGAGGAGAGAAGGATTCATTTTGTAAGAGGACTACTAGAGTTTTTCTTTACTAAGCTATGGGAGAGCACAGTCTACAGGCATACCTCAGAGGCAGCACAGGCTTGGTTCCAGAGAACCACGAAAAAGCAAATATCACAGTGAAACAAGTCACACCATGCATGTGAAAGTTAGGTTTACACTATATTGTAGTCTATTAAATGTGCAATAGTATTATGGCTAAAAAAAATCAGTGCACATACTTTAATTAACATATTGCTGGAAAATGCCAAAACAATTACAATAGTAACTTAAAGATCACAGATCACCACATTAAAAATATGAAAATAAGGAAAAAGTTAGAATATTGTGAAAATTATCAAAACAGGACACAGAGACACAAAGTGAGCAAATGCTGTTGGAAAAATGATGCCAGTAGACTCATTTGATACAAACCCTCAATTTGTAAAAACTGCAATATTTGTGAAACGTGAGAAAACGAGGTATGCCTGTGACCTCCTCCAGTTTGTAAATGAGAGAGTTGAGACCCGGAGGAGACATGACTTGCCCAGAGTCACGTGCTGGTCAGTGACAGCTGACTAGGAAGGCTTTAGTTGCCACTAGATCCTTGGCCTTTTGGTGGGGGTTGTTCCTCTTTGGTGCTCAGTGAGGAAGAGAGGGAGAGGAAGACCCTTCTTCTGCCAGAGCAAGAGCATCCCCCAGGGTTGATGCTGCTTCTTCCTTGAGGGTCCTATTGGGGAGGCACCCACCAGCAGACAGGAAAGCTGATGAGCCTTTTCCTTACCCCGAGGACAGTTCACCTGCCACAGGCTCTGAATCAAATTTTTCTTCACAAAACATCCCAGCAGCAAAGTCCCACTCTCAGACCAGCCAAAAAAAAAAAAAAACCAGCCCCCATGCCCAGAACTTGATGTTACAGACCCAAGTCTTCTCTTTAGGTCTCAACACTCTAGCGGCTTTTGCAGTTTGTTTTTGTACAAACATAAATTATTTAAATCACACAAGATGACAGTCAACTTTTCAAACCAGGTACCGATCACTTGTATGATTTTTGTGTATGCTCTGGTACACTACGCCTGTGCTAACGAAGGCTAGAACCCATTTTGTGTGTTGGTGTTCACACCTGTGACATTAAGAGGATACGTCTGCATTGCTTCTTTCCTTCTGTTGATGTTTCTGTGGCGAAACCCTGCACATGTCATTTCTGAAAAGCCTTAAATCTTCGCGATGTTGCATGTAGGGTTTGCAGTGCAGAAGGCTGCCTCGGAACTGTGAGCCCTTTTGTAAGCTGGAAGCATTTCTCTTACTATTGTTACTTTTGTAGGAAGTTTTCAATTCAGAGCTGCCAAAGCGTTCAGTAAGCAGTGCCTTAGTGATACTTAGTCGTGCCGCCAGCCTTTTCTCACACCGGTTCTCTATGTCCCTTTACTAATCGGCTCAGTATTTAAAACAGAACAAGCAAGCGTTGTTTTCCATTTTGTTTTTCGTAAGCCCATTTTTCTCCATATCTATAGAAAACTGACTTCTTGGTCTGAAATCCGAAATGAACAGAAGTCAGTTCATTGACCACACCGTCCAATGTCTATACCAAAATGGAAGGTCTTGCAACTTCATAGTTTACTATGAAAAGCAAATTGTATACTTTAAATGTTGCCTTTTAAATCCACGACCAAAAACTTAGCTATTTGTGAACCTTCTGCACTCTAGCATGAAAGTGCCTTTGGTTTGAGATTCCAGCTTAGAAAAGTGCTGCCATAATCATGATAATTTGTAGAGAGACCAAAAATATTCTGAGATCACCGTAATGCCTTTGGTTTACCGGGATGAATAACCAACGACAGGCCTCTGTTCACAAGAGCACGACATGGACCCCGCCTGCTGTGCATCATACGCCGTAGGGGACCCCCCCCACCACTCCCAGCCCTGGAGCCCACGGCAGCAGGAGGATCCCCAGAAACTGGTATGTTTGTGTGCCATGACCCAGTACGCCATCTCTACCCATCACCCAGCCCTGCGTCCGCCCGAGGGGACTTGCACACAACCCGCAGGCTGTCAGCCAGTGGACAGATGTGACCTTCTCCGTACGCTTGTGCTCAGTCTGTAGAGCCTGCCTTTCCACTCAGATGCCAGCGCGCACTTCTCCGGTTTACGCAGTGATACCGTTTTGAAAGTTGGAAGCCTCAAACTGAGATGACAGTGCAGAACAAAAAATGGTTTAGGGTCATCACAATTGACGTGTTCTTCTTAGGGCGAAAATGTTGACTCTGAGTGTTGTCTGAATGTGCTATGAGAAACTCCCAAAGAGTACCACTCACAATTCGGAATTTTCAAAGAATGTTCCAGCCCTCTAAAGGGCAACTCTTTTAGAGTCCCTGTTGGCTTTTATCAAAACTTTGCGTAAATTGGGAAAACTGATAGAGGGGAGGAAGAGGAGTGAAAAGGACGAGAAGGCAAAAACACCAGCCAAATAAAAGCCAGGACAAAAAAAAAAGATTGTTCTTTACCAATATAGACTTTACAATGACATTAGAATCGTTGAAAGTTAGCCTCTGAATGTGTATAATCCATCTGTTTCTACCTGGTGTCTTTAAGAATACCCTCTTTGGGCTCTCTGAAACTTCAGGAGTGATTTCTATCCACACCAAGTTGTGAGTGCTCATAGAAGTTTATACAATGAAAAAAAAAAAAGTCAAATGAAAAGGAAAATTGCTCAACATAAGTTATAGTTAGCTGCTTGAATTCAGCCCCTCCCTGTCATGTCAAGACTACACCACAACTTGGAAGAAATTAATCAAATATTTGTTTTCCTGTTTCCCTCTTCAACTGTTCCTGTGCTTTCTTTGGCAATAGTTTTCTCTCATTAACTCATTGCTTATATTGTTAAGAATGAAGGTTTGTGTTTAAAATGTATTGCATTGCAAAGGATAGTTTCTCTGAAGTCATGCACCATTAAATAAGATGAAATATTTGTATTTATTGTCCTACTTCCTAAGATGTTAACTTGTTTTATTCTCTGTGAATTTGCATTGAGTCTGTCATATGCCCCACTCCATCATTTTAATATTTGAAATGGCATTCATTTTCCCTCTCTGTTCATCATTAAGTGGGGTCAGATTCCAAAAGATTCCACCTCTCTCAGGCTGGCTCTCTTTCGTCTGACTTCCATTGTGAAAATTTCTCATTCCCCTTTTTCTTAAGAGAGGCTGACAGAATCTAGGTATAAATCAATTGGAAACCAGTCTCTGGTTTTCTCTCTCCCTCCCTCCCTTTCTTTCTTCTTTCTCTTTTCCTTTTTGCCTCAGTCCTTTTCTGTGATTAGTTTCACTGTGTAAATTAGATATGAACTGCACTTCTTAAAAAAAAATCTCCCTGTTACCTCCTTGAAAGAGTCCCTTCCGTAGGCCTTTCTCAGTAGGCTCATGACTGCAGATAAGGAAGAAAAAAACAAGTAAAAACAAAAACTACGTGCCTAAAAATGACAAAAAAAAAGTTTTGTAACATTTAAAAAAGAAACCTGAATAGCCTTTAATTCTTATGAATATGCTTACATTTTATGTAAATTGGTTTTTGCCACGTGTGTTTGTTCACATTCTCAGTGACTTAATGGGATTCTCACAGTCTGTGTCTTCGTGTCACGTGTATAAAATGGGCTTGTGATGTAAGCGTTTCATCTGCTCAGTGGTTCCTTCAATATTGTACTGCTGTTGGGAGCGGGCTGAGGAGTCTGCCTTTGGGCAGTAAGCTTCCTCTTGGAGAGATTGGAGAGATGGGGGGTGGGGGGTGCAAATTCTCACATATGTTTTCTTAACCTATTTGCAGAAGCTTTCAAAAGGCATTTGGTTAAACCTCTTGGCAGTACAGTATTCTTGTATTTGTTAATGTCTGTGTTTAGGTACTGGTACCTTTTTGTTTAAAAATGTTCTAAGTGTTGGCTTTAAAGTGAATTTATCTTTAGTATGATAGTTATATGAAAATTATAGGGTTTGTGTGCAGAGAATTTTTTTATAAAGTGCTTTGTAAAAAAAAAAAAAATGTATTCTAGCTTTCGCGGTACATATGTGTGATAACTGTAATATCCATGACAGTTAAGTGCAATTATTTCATCACTCTAAAAATGCTATTTTTGTGTCAGTTCCTGCAGGTGTTTTCATGTCTTTGCAAAGTGACACATTTTGATGCCTTCTTGATAAAGTGGTAGACATTTTGTAGCTTTATAGAAACTTTGTATTCATACGGTATCAATGAAAAATAAAGAAAATGAAAGTGTGGGTCACCTTTTTTATCTGCAGAAATGTATGTTGTTGAAAAT EMBV3_17750 ACCCGTGACCCCTCCATCACGATGGTCCGATGCCACGTGAAGAGTCCAACTGAAAGTCCA Gene GeneID:281424|PRM2:NM_174157:30_cdna Constitutive 0 NULL GeneID:281424 25 GENE PRM2 MGC133610 protamine 2 EMBV3_15601 GTTGCAATCACAGAGGAATGTAGCCTCAGAATTGTGCACGCATGGAGTAACGAGAGGGTG Gene GeneID:535541|LOC535541:XM_002699469:45_cdna Constitutive 0 NULL GeneID:535541 X GENE LOC535541 NULL similar to mitochondrial solute carrier protein EMBV3_19192 GCTGCGCTCGCACCTTGAGCCCACCAACCACGCCATCATTCAGACGCTGCTGAACTCCAT Gene GeneID:286859|GDF7:XM_002691470:337_cdna Constitutive 0 NULL GeneID:286859 11 GENE GDF7 NULL growth differentiation factor 7 EMBV3_25363 CAAGGACTTGAGAAAAACAGCAGTCTTGGGCTCCACCTCTTCCTCCAACCAGAGGCAGCC Gene BVT0102_125865 + 0 NULL GK000007.2:8906532-8911329 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08570 ACCAAATTGCATAAAGAAGAATTATCTGAGCTGAAGTCTCTTCTAGCCCCAGGATTACAA Variant GeneID:281119|DNMT1:NM_182651:273_cdna 229^448 1 EMBV3_27781 GeneID:281119 7 GENE DNMT1 DNMT DNA (cytosine-5-)-methyltransferase 1 EMBV3_07727 CCTGAGGGTGCTGAAGGACAATGGAGACGAGAAGGAATGGAAGATCTCACTAATGGTGCT Gene GeneID:508386|CD48:NM_001046002:248_cdna Constitutive 1 NULL GeneID:508386 3 GENE CD48 MGC137557 CD48 molecule EMBV3_29672 AAAACGGTAAAGAAAGCGGCCCGGGTCATCATTGAGAAGTACTACACGCGCCTGGGCAAT Gene GeneID:788861|RPS17:NM_001099210:150_cdna Constitutive 0 NULL GeneID:788861 21 GENE RPS17 MGC165673 ribosomal protein S17 EMBV3_39788 AGCGAGAAGGAGCCTACTCAGAAGAAAAAGATTCCAGAAGATGAGTCAAGTGTGCCGACC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16980 GATTTTCAGTCATAGCCAGCAAGGAAGGTCCCAGTGTTGAAGTAGGTGAGCCCTTATGGA Gene GeneID:538928|ZFP62:XM_002689031:90_cdna Constitutive 1 NULL GeneID:538928 7 GENE ZFP62 NULL zinc finger protein 62 homolog (mouse) EMBV3_30384 CCCCAATTCTTTTCCAAGTAGGTTTTGTTTACTCCCCAATCCCTGAGCCAGATGTGGGGG Gene GeneID:539555|MARCKSL1:NM_001076172:157_cdna Constitutive 0 NULL GeneID:539555 2 GENE MARCKSL1 MGC142762 MGC142786 MARCKS-like 1 EMBV3_02937 AAGTACAGGGAGAGCAACAGGCTTGGTTTGGGGTCATCCTGTATATCCTCCTGGTGGGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32934 AAGCTTTTGGAGGCAGTAACCTCTCAATCGGTGTCGGATGAGGCTATCACCCAGACGATG Gene GeneID:541205|THNSL2:XM_002691356:192_cdna UTR3_Alt 2 NULL GeneID:541205 11 GENE THNSL2 NULL threonine synthase-like 2 (S. cerevisiae) EMBV3_32900 TAAAACCGACCCATTTATCTTTCCGGAGTGCCCTCACGTCTACTTTTGTGGCAACACCCC Gene GeneID:281991|POLD2:NM_174428:10_cdna Constitutive 2 NULL GeneID:281991 4 GENE POLD2 MGC138082 polymerase (DNA directed), delta 2, regulatory subunit 50kDa EMBV3_03684 ATGCCACGGCCTTCCAGGGCACACCTCTAGCCCGGACAACGTGGCCCTCCAGGTGGCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13463 CCGCCATTTCCTGCTTGCCATTCACCTCACACGGTAGGATGTCGCTCCAGAATTTTGCTT Gene BVT0102_181450 + 0 NULL GK000006.2:33809587-34205474 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202927 TCONS_00202929 TCONS_00202928 TCONS_00202930 1 XLOC_124067 NonCoding TCONS_00202929 XLOC_124067 NonCoding NonCoding - 6:34014439-34031106 - TSS152137 285 1 TCONS_00202929_1 38 0.319298245614035 3 0.983079323172927 0.00213968559110323 4.01562646077928e-08 0.0011127592917422 0.000216133201505066 0.000677807675340779 1.54944649578317e-08 5.0564654755128e-27 9.0963706366524e-05 0.000284215230722209 0 0 0 0 0 3.3658933959753e-09 0 0 0 0.00307940057330518 0.00356592109793405 0.000450678970590383 0 0 0 0.00393637566616646 0.0024438062842242 0.00144570983276772 0 0 0.000379720692140265 NR_036362.1 MIR2895 Bos taurus microRNA mir-2895 (MIR2895), microRNA. 7e-09 64.4 80.00 0.242105263157895 0 noncoding CACCTCCCTCCTTGGGAGTGAAGCCTGCCGCCATTTCCTGCTTGCCATTCACCTCACACAGTAGGATGTCGCTCCAGAATTTTGCTTCAGACATCTTCAGAGCCTTCTGGAGTCTTCTCTGGTCCCAGCATGGGCCACCAAATGGTGACCTGAAACAAAGAGACAGCCAGATATTTCTCTAGCAAAGGTGAATTTATTCCAGACCAACAGCGAATTGAAATTCTGGATCTGCAGCATTGTTTTAAACATGTGCACTTGGATGTTCCAAAGGGACTCAAATTCGCC TCONS_00204880 TCONS_00204881 TCONS_00204882 r 5' 204854 TCONS_00204880 TCONS_00204881 TCONS_00204882 r 5' 204854 EMBV3_26873 AAGACAAAACTGAAACCACACTGGTCTCCAGAAGGAGGGCATTCCACCCAAAGACCCGCT Gene BVT0102_171283 + 0 NULL GK000005.2:119675601-119771362 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43227 GTTCACATGATGACACAATCCTCATCTGGGACTTCCTAAATGATCCAGCTGCCCAAGCTG Gene GeneID:534072|BTRC:NM_001083475:183_cdna Constitutive 1 NULL GeneID:534072 26 GENE BTRC MGC142684 beta-transducin repeat containing EMBV3_35644 ACCCTGTCATCCTTGGTGAATAGTGGGCGCCAGTGTCCAATCGGTATCCCTGCTACTTTA Gene BVT0102_038154 + 0 NULL GK000005.2:115279369-115517820 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16845 GGAGTTTATGCCCCAGAAGACGTGTATCAATTTCTGCCAACGAGAGTTGGGGAGTCAAGG Gene GeneID:100335896|LOC100335896:XM_002697808:430_cdna Constitutive 0 NULL GeneID:100335896 24 GENE LOC100335896 NULL centrosomal protein 192kDa-like EMBV3_15083 CCGAGCCAGGCTCTGCTACCTACATTTCAGAAAGCATCAACCTTTCTCAATGGACGCGTT Gene BVV0102_213265 + 0 NULL GK000011.2:19780729-19815844 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00027116 TCONS_00027117 TCONS_00027121 TCONS_00027120 1 XLOC_015188 Coding TCONS_00027117 XLOC_015188 Coding Coding PRKD3 11:19701222-19788765 j TSS19302 6618 1 TCONS_00027117_4 779 0.0480507706255666 20 0.924630463092002 0.00276902590694723 0.00196521380812173 0.00206890311368788 0.00172035708479014 0.00176280978439409 0.000824188374687764 0.00196718429174308 0.00208501932227731 0.00399591773530078 0.000171963199700226 3.80124227006915e-05 2.49940202974061e-07 0.000657667023460975 0.00133787310932294 0.00115487124433603 0.000429400336601436 0.000652016625522833 0.000691465299657394 0.0014378828701028 0.00144675030836176 0.000783420828259013 0.000421233320059302 1.14210076509647e-41 8.65752623251254e-05 0.00198673435691382 0.00150537243181642 0.000932474830053343 0.000161004336463994 0.000157960045407275 0.000507923713641159 XM_005212648.1 PRKD3 PREDICTED: Bos taurus protein kinase D3 (PRKD3), transcript variant 0.0 5425 100.00 0.45436687821094 XM_005264237.1 PRKD3 PREDICTED: Homo sapiens protein kinase D3 (PRKD3), transcript 0.0 4044 90.54 0.444394076760351 TCONS_00027117_4 sp|O94806|KPCD3_HUMAN KPCD3_HUMAN Serine/threonine-protein kinase D3; 0.0 1544 97.23 0.973042362002567 4 coding 1 0 1 1 -0.161934655902557 0.48152687953616 -0.0106907608370295 0.857984750752305 CGGGACGGGGCGGAGGGAGGGAGGGAAGAAGGGGCGCCTGTGGCGGGCGGGATTCTGCGAGGCGCGTGAAGCCTCGCTGGCTCCTGGTCCAGTACCCAGACGCTGGCAGGCTTGGACTTTCTCACGACCGGCCGAGCCAGGCTCTGCTACCTACATTTCAGAAAGCATCAACCTTTCTCAATGGACGCGTTTATCAAGTGGAACATACCTGTTCTATTTTAAAAAGCTTTGTGCTTAATCTTGGAAAAATTTACTCCTTCAAAATGAAAATGAGGACATGTGAGAAGGTGATATAAGGTGTGGACATTTGAGAAAGTGTCCCATTAGATCAATGAACCAAAGGATACGAACTGAATAGATTAATCCTAAACACTTTTTAATTTTTAAACTAGGAGGATTTTATTTGACAGAAAAACAACTCTTATTCATTATGTATTTTCTGAAATTAAAAGAGAGAAACAAGAGTAGACTTAAAAGAAAATAGGTGAAGATGTTTAGTAGATAAACAATGCCAACTCTTTTCTGATGAGGATAATTCAGTGATGTTAAATCCTTCCCAAAACCCTGGTTGTGGTCCTAACAACAAGACTTTTTTGATGGGACTGATATTAAGGGAAGTGGGACCTTTGGTATAGTCAACTCACAGTTGTAGAACTTGCCATCATCAGCATGAGTGGCTTAAAAGAGGAAATAAAGAAGCTTTCAACTAAATCCAAAACTACAGTCATTTTTTTACCGCTGTGATTTTAAGGCCTCTTCATAACCATTGAAAAAGAATTGACAACTGTTTTAAAAGATTAAAGAAAGGCAGATGTCTGCAAACAGTTCTCCTCCATCAGCTCAGAAGTCTGTAATACCTGCCACTCTTCCTGCTGTGCTTCCAGCTCCTTCTCCGTGTTCAAGTCCTAAAACAGGACTCTCTTCGAGACTCTCTAATGGAAGCTTCAGTGCACCGTCGCTCACGAACTCCAGAGGCTCAGTGCATACAGTCTCATTTCTGCTGCAGATTGGCCTTACACGGGAGAGCATTACCATCGAAGCCCAGGAACTATCTTTATCTGCTGTCAAGGACCTTGTCTGCTCCATTGTTTATCAAAAGTTTCCAGAGTGTGGATTCTTTGGCATGTATGACAAAATTCTTCTTTTTCGCCATGATATGAACTCAGAAAATATTCTGCAGCTCATTACCTCAGCAGATGAAATACACGAAGGAGACCTAGTAGAAGTTGTTCTCTCAGCTTTGGCCACAGTAGAAGACTTCCAGATTCGTCCGCATACTCTCTATGTGCATTCTTACAAAGCGCCTACTTTCTGTGATTACTGTGGTGAGATGCTTTGGGGATTGGTACGCCAGGGACTGAAATGTGAAGGCTGTGGATTAAATTATCATAAACGATGTGCCTTCAAGATTCCAAATAACTGTAGTGGTGTAAGAAAGAGACGTCTCTCAAATGTATCCCTGCCAGGACCTGGCCTCTCAGTTCCAAGACTCCTGCAGACTGACTATGTAGCCCTTCCCACTGAAGAGTCACATGTTCACCAAGAACCTAGTAAGAGAATTCCTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAGATGGTCATGTGCAGGGTGAAAGTCCCACACACGTTTGCTGTTCACTCATACACCCGTCCCACAATATGTCAGTACTGCAAGCGGTTACTGAAAGGCCTCTTTCGCCAGGGAATGCAGTGTAAAGATTGTAAATTCAACTGCCATAAGCGATGTGCATCTAAAGTACCGAGAGACTGCCTTGGAGAGGTTACTTTCAATGGAGAGCCATCTACTTTGGGAACAGATACAGATATACCAATGGATATTGACAGTAGTGACATGAACAGTGATGGTAGTCGGGGCTTGGATGACACAGAAGAACCATCTCCTCCAGAAGATAAAATGTTTTTCTTGGATCCATCTGATCTTGATGTGGAAAGAGACGAAGAAGCTGTTAAAACAATCAGTCCATCAACGAGCAATAACATTCCGCTGATGAGGGTCGTCCAGTCCATCAAGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGGAAGGGTGGATGGTCCATTACACCAGCAGGGACACCCTGAGAAAAAGGCATTATTGGAGACTGGACAGCAAATGTCTTACACTGTTTCAAAACGAATCTGGATCAAAGTATTATAAGGAAATTCCACTTTCAGAAATTCTCCGCATATCTTCACCACAAGATTTCACAAGCATTTCACAAGGCAGCAACCCACACTGTTTTGAAATCATCACTGATACTATGGTATACTTTGTTGGTGAGAACAATGGGGACAGCTCTCACAATCCTGTTCTTGCTGCCACTGGAGTGGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGCCAAGCTCTCATGCCTGTGACGCCTCAAGCCAGTGTCTGTACTTCTCCAGGCCAAGGGAAAGATCACAAAGATTTGTCTACCAGTATCTCTGTATCTAATTGTCAGATCCAAGAGAATGTGGACATCAGTACCGTTTACCAGATCTTTGCAGATGAGGTACTTGGTTCAGGCCAGTTTGGTATCGTCTATGGAGGAAAACACAGAAAGACTGGAAGGGATGTGGCTATTAAAGTAATTGATAAGATGAGATTCCCCACAAAACAGGAAAGTCAGCTCCGTAATGAAGTGGCTATTTTACAGAATTTGCACCATCCTGGGATTGTAAACCTGGAATGTATGTTCGAAACCCCGGAAAGAGTTTTTGTAGTGATGGAAAAGCTACATGGAGATATGCTGGAAATGATTTTATCTAGTGAGAAAAGTCGACTTCCAGAACGAATAACTAAATTCATGGTCACACAGATACTTGTTGCTTTGAGGAATCTACATTTTAAGAATATTGTGCACTGTGATTTAAAGCCAGAAAATGTGCTACTCGCATCAGCAGAGCCATTTCCTCAGGTGAAGCTGTGTGACTTTGGGTTTGCACGCATCATTGGTGAAAAGTCATTCAGGAGATCTGTGGTGGGAACTCCAGCATACTTGGCCCCTGAAGTTCTCAGGAGCAAAGGTTACAACCGTTCTCTAGATATAATGCTGCATTTATGTACCCACCAAATCCATGGAGAGAAATTTCTGGTGAAGCAATTGATTTGATAAACAACCTACTTCAAGTGAAGATGAGAAAACGTTACAGCGTAGACAAATCTCTTAGTCATCCCTGGCTGCAGGACTATCAGACTTGGCTTGACCTTAGAGAATTTGAAACTCGCATTGGTGAACGTTACATTACACACGAAAGTGACGATGCCCGCTGGGAAATACATGCATACACACACAACCTTGTATACCCAAAGCACTTCATTATGGCTCCCAATCCAGACGACATGGAAGAAGATCCTTAGTTATCAGTGAGCTAACTTCAGTAAGGAAGCATGTCATGTCATGGACTGGTGTTTTGCTGCGTAACTGTTGTTCTTTGTATGCTGTCATCTGAAAGGATGCAAAGATATGGAAAATATAAGGAATCAGTGACACCGATACTGTAGTTCATACTGAGTAGGTACAAGAGGGGAAACTGAGTCATAAAAACATAATGGAATCCAAGATGAAGCTTTTCATAAACCTTTACAACGTAAGCAATAACTGGTTTTTGTGTTTTTCCCTAAGCGCTCATTTTAGTACAATAGTGGCACTTAATTTATCTTCCTTTCTTGTTCTTACATCATTTTTTTTAAAAGGAGAAAAAAGGCAAGCCAGAGTCCAGTTATTGCATAGCTTGATCAAATCATACAAGAGTTATTACACAGTTTATAACTAAACAGATTTGCATTTATGAGATAACTGAGAGGCTACCAACATGCCATTTCCTATAGACTTTAAACATTTGTTTAACTGACCACAGAGGCACTGAGGGGTTTTTCCTAGATGCCTAGAAAGGGAGTGCTGAACTGGTTTACCCTTCTCTTTTAGGTCAGTTAAACTCCAAAATAATAGTATTGCTCTAATTTCTTTGGGGTTGAAATTCTGAATATGCTCTTAACATGAAAAGTTGTCACCTTTTGTTTGTATGTTGCAACAGCCCCTAAGATTATTTGGGACAACTGATACACAAAAGCAGGAGTAGGAACTGCTGGTCTAAGTGCTGAGTTGTTACATACGTCTTCCTGTAGTTCAACTCTGCTGCTAAATAATCACATTCCCATTGATGCTGTTGTGATGTCACCATTAGATTCCAACATTTAATGGGTACAGATCTGAACTCTAATCACACAATTTCTCTTTACATGGGACTGTATAATTTGAGGAAGAAAATTAAATACATGCCAAAAGTAGGGACAGTGCAGGGTTAGTTGATGCTACAGGAAAGAATAACAAACAATATTCTTTTTTTCTTCCCTTAGCTTATTGGAAGGCTTTACAGATATCTGGAATGTTTTTAAATCAATTATTTTCAGCAGTTTAGGGGAGTGGGTGGGGTAGAGCATGAAACAGTTTATAAAGAGTAGGGCTGTATTATCAGCTGAGCAAATGAAAGAATGAAGTATTTTTAAAAACACTGCAGCTCCAGCAGCCAGCTAAAGACAGTTTTTGTACCCTAACATCATATTTAAGAGGTTAGATTTTTTCATAGCTTTTAAAAGTTACTAATAGTTTCCCCCAAAAAAGTTAAAGATCTAGGACTATCCACTTATAAAAAATCTAGGGGCTTTGTGTTTCTTGATTCCTAAATAATCACTGTGAATGTTTTTTTTCCCCCTCCAAAAAGAACAAAAGATGTGAAGCCCAAAAATCTGGCTCCACTCTTAAGCTGTGTTGACCTCGGCAGGTGACAACCTGGCTGAGCTTTGAGCTCCTCAATCTATAAAATAAAGATTATAATTCCTGCCTCTGTCTTCCTTAATGTTGTTGTGAAGATCAGATATTTATAAGCTAAAAGTTATAAAAGTGTTAACTGTCATTTCCCATGGAATCTGAGATAGCAAAAGAATGTTCTTGTGAACAGAATGAGAGGGCCTTCAGAGATCCCTGAAGCTGCTCCCTTGTGTAGGGCTAAAAATACCCTTGAGAGAATGGAAGCAAACACCAGTGCTCCTCTGTTCTGAGCTCTTTACATGTTTTTCCCTCACAGGAGACATGGATAAGTCATCGAACTTTGTCTCACAGATAAGGAAAGTGAGGCACAGGAAAATTAACTAGCTGCCTAAGGTCACACAGTTAGGATGTGGGTTTGAATCCGGGCAGTGTGTCTCCAGAGTCCTTATTGCTAACCATTCTGCTATACTGCCTACCGTTAGATATTCCCAGAAGACATTCCACAGTGTCTCTCACTATTTCATTCTCATACAGGAATTTAAAAAACTAAAAGCAAATTAATTATGTAAAACCTTTGGGAAATGTATTTTCCCTGTGATAGGAGGTAACTTCCCCTAATTTCTCTAAGTCTGTTTATACAATCAGTGTGCTCAAATGAAGTAATTTCTGAGTCCTAGGCACCCTATTGTGGTTTTACTGTGTAAGATGAAAATTAACTGGAATGCTGTTTGCTATACTTATATAATAAAACTTTAAAAGCCATAAAATTAATTGCACTCTTTGTTTTTGTTATTGAGAAGTTTTCTTAGAAAAAACTGTAAAGGCACTGTCAGATAATTTGGAATTGAGTAATTTTCTCCAGTTACTGTATAACCTGCATAACCTTTTTTGTCTTGAAGTCATCATGTTTGTATAAGAAATAACTGTTAGAAACATTTGATAATGTATACAAAGTCTGTAATGACATTGTTTAGTACATTTTTAATTATATCCCACTTTTTGTAAATATCCTTGAAGTTTGATAATAAAATGTATTTCCATATCACTGTACTTTTCCATGTGGAAACCTGAGCTAGTAGAGGTATCCAGAGAAAATTGTATTTGGTTGTGTTATTTTCCCAGGCTTTAGTAAGAGAACTGTTTTGGAAATAGTATTTGTAAATGAAACTAATGCTATATTTAAGAACACAGATTTTTTTTATCTGACTAAAATAAAAAACAACTCATTATTACAATTTTATACAAAATTTGAGGTTATTACCTCAAGGTCTCATTTCTTAAAAGTTTGGAATAATTAAAAGTTTTTCAGAAACTACCATTAAATATTCAACTATTGCAACTGCCAAAAGACTTAAGTAAGTTAATTTATGTTTTTCTAGGTTTTAAGAAGCACTGGCTAACTCTTTCCCCTTAATCATGAAAACTATTAAATAATTGGGAAGGGCCAACTATGGACATTTTCATTGAACACTCTGCCAGTGAACTTCCAATATAGTTAAGCTATAAATTGAAGATATACAGCTAACATTCTTTTAATCTCTCAAATTTGTGTGGCTATTACTATAATTCTTCAGAAAGTCCATGTCTGGTATTATTAAAAAGTTCTGTGAACCAAAAGAATGGGAACTTACAGAAATAAATCTTGACAGTTATCTGGAAATGAGAGAATTAACTAATTTTAGAAAATTATTTCTCCTAAGTCTGCATTTACTCTCATTCATGTTTTAAGTACATGTCAGGTTGATTGGTTTTACTGTGACTTTAAAATTTTTTTAATCAAATTTTGGTTTTAATTATAAAATTCACAG EMBV3_25735 CGACTGGAGACACTGTTCAGGATATTTAAGCAGCTGGACCCCGAGAATACTGGAATGATC Gene GeneID:281662|CAPN2:NM_001103086:2_cdna UTR3_Alt 2 NULL GeneID:281662 16 GENE CAPN2 MGC138930 calpain 2, (m/II) large subunit EMBV3_41085 TCGGCATCTCTGCCACACCTGCTAAGGACTTATCTGCACCCCAAAGAAGCAGAAACTATG Gene BVV0101_047915 - 1 EMBV3_25813 GK000001.2:56894476-57054878 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42826 AGAGGACTGATGAGCAAGACGTCCCTGCAGGTGGCAGCCTCCTCCATCTCCTCTGCTGGC Variant GeneID:540440|SETD4:XM_002685150:116_cdna 737^825 1 EMBV3_23390 GeneID:540440 1 GENE SETD4 NULL SET domain containing 4 EMBV3_40453 ACAATGACATCATGTTGGTTCGTCTGCCCCGGAAGGCACATCTAGGCCCTGCTGTACAAC Gene GeneID:530795|KLK9:XM_002695139:671_cdna Constitutive 0 NULL GeneID:530795 18 GENE KLK9 NULL kallikrein-related peptidase 9 EMBV3_05639 GAGTGACTTTATCTTTAACCAGAAGATTCTCTTAAAGAACACGCACGCTTGCGTGCATGC Gene BVV0102_420207 + 0 NULL GK000013.2:72847321-72864073 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06711 TCATTACCAGGCAGAAGGAGACAGGGTTGATTTTTCTTCCTCTGGACCTCCATCCAGACC Gene GeneID:529196|LOC529196:NM_001075921:131_cdna UTR3_Alt 1 NULL GeneID:529196 22 GENE LOC529196 NULL C-C chemokine receptor type 1-like EMBV3_29113 CACAACAACCCAAAACCTGTGGGACACGGCAAAAGCAGTCCTAAGGGGAAAGTTCATAGC Gene BVV0101_025094 + 0 NULL GK000005.2:25408936-25536902 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00177279 TCONS_00240474 TCONS_00031179 TCONS_00157937 TCONS_00187576 TCONS_00019989 TCONS_00022064 TCONS_00160964 TCONS_00124121 TCONS_00250932 TCONS_00166787 TCONS_00249014 TCONS_00089140 TCONS_00199804 TCONS_00206484 TCONS_00238440 TCONS_00156739 TCONS_00152752 TCONS_00198585 TCONS_00239312 TCONS_00148277 TCONS_00023334 TCONS_00251704 TCONS_00006469 TCONS_00223458 TCONS_00152648 TCONS_00063138 TCONS_00209596 TCONS_00111547 TCONS_00098384 TCONS_00254568 TCONS_00031897 TCONS_00065822 TCONS_00252355 TCONS_00088291 TCONS_00233373 TCONS_00160971 TCONS_00071184 TCONS_00023027 TCONS_00241273 TCONS_00123172 TCONS_00220656 TCONS_00253241 TCONS_00123617 TCONS_00251853 TCONS_00231277 TCONS_00165811 TCONS_00070956 TCONS_00099588 TCONS_00206863 TCONS_00210178 TCONS_00019196 TCONS_00017462 TCONS_00185943 TCONS_00059437 TCONS_00198662 TCONS_00055859 TCONS_00189807 TCONS_00240690 TCONS_00190575 TCONS_00186814 TCONS_00066280 TCONS_00249913 TCONS_00250196 TCONS_00197973 TCONS_00032586 67 XLOC_131641 XLOC_107053 XLOC_147138 XLOC_017428 XLOC_096391 XLOC_113621 XLOC_010667 XLOC_012735 XLOC_097857 XLOC_075673 XLOC_153875 XLOC_101623 XLOC_151957 XLOC_053926 XLOC_121456 XLOC_125006 XLOC_145107 XLOC_095199 XLOC_092517 XLOC_120239 XLOC_145978 XLOC_090159 XLOC_014001 XLOC_154645 XLOC_002032 XLOC_136758 XLOC_092413 XLOC_037865 XLOC_128107 XLOC_067447 XLOC_058630 XLOC_157500 XLOC_018142 XLOC_040541 XLOC_155296 XLOC_053078 XLOC_142855 XLOC_097864 XLOC_042956 XLOC_013697 XLOC_147937 XLOC_074726 XLOC_133973 XLOC_156182 XLOC_075169 XLOC_154794 XLOC_140766 XLOC_100651 XLOC_042733 XLOC_059831 XLOC_125383 XLOC_128688 XLOC_009876 XLOC_009039 XLOC_111996 XLOC_036403 XLOC_120316 XLOC_033667 XLOC_115844 XLOC_147354 XLOC_116610 XLOC_112865 XLOC_040994 XLOC_152856 XLOC_153139 XLOC_119632 XLOC_018826 Coding TCONS_00017462 XLOC_009039 Coding Coding - 10:60679585-60805384 - TSS11925 4781 1 TCONS_00017462_13 314 0.682493202258942 2 0.962010524809615 0.000601298432039994 0.000985477528576054 0.000482616083173662 0.000453151670783663 0.000363950717484275 0.000156135556706714 0.00051153973984229 0.000407764433421588 0.00129659705153548 0.000488003589354797 0.000101338875359702 0.000230875059206773 0.000222433203692121 0.00137177165111527 0.000871061071554086 3.0076614276883e-05 2.00339849741623e-06 5.24805655816968e-06 0.000209580304737545 0.00049388729777317 0.000106243137221759 1.92905911266884e-06 3.97416044210023e-05 3.37014325425677e-05 0.000598488300064101 0.000600227408013078 0.000483682041305394 3.36803666008462e-05 1.35649511861724e-05 1.55094936479728e-05 XM_002703974.2 C3H1orf168 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf168 (C3H1orf168), mRNA. 2e-119 435 94.66 0.0583559924701945 NR_047469.1 LINC00506 Homo sapiens long intergenic non-protein coding RNA 506 (LINC00506), transcript variant 1, non-coding RNA. 7e-138 497 68.25 0.305166283204351 TCONS_00017462_13 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 3e-113 359 56.17 0.977707006369427 0 noncoding 0 0 0 0 -0.0177227814895908 0.877283267014495 0.0243225401000388 0.597336674673177 CCTTCCCCCCTTACACTGCGCCTAAGAACGTGAGAACATGGCCGAGAGGGCACGGGCTCTGAAACAGAATGTGGGCCCTCACCAGAACCGAACCATGCTGGCACCCTCGTCTTGGAATTCCCAGTCTTCAGAACTCCTTCCAGTCACTGTTTATGAAGGTATGATTCTCAACTATCTGCATCAATAGAAACAAAAAACTAATGTGAATTAAGTGACCTGCTTAAGATCATGAAATGAACCAATAGAAGAGAGAAAATTTCCATCTGCCTCCCTCCAAAGTCTCTGATTTGAATCCAAGTCACCTACCTATGGCATAGCAGTGTTTTTCACGTATGAAGTCAGAGCTGACCTCATTTCCCAAAGGATTCCGAGTGGTTTGCAATATGAATAGATACAAGTAAAGATAAAATATAAACAAATGAAGATAACCAAAGATGGAAAAAAGGGGGAAAAAAAGGTCAAGGAAAATATTTTATTAGAGAAGAAACATTGCCTAAAGCCCAAAACACTGCAGTGCATTTAAAATTGATCTTCTTCCATGTGTGGAGTTCAGTTGATGAGGTATTTTTAAGGGCTCAGTAATTCCTCTGGGGCTTTACTCCATGCCAGATATTGACCCAGAAGTATGATTAAAGCAATCAAACTGTAGAATTTATCCCCAGGATGTGATCAACACACTGTATTTATGCATCTGTGGTTAAAAGGGAAATCTGTCCTCCGAGACTCATGTTGCCAAAAGACCACGTCAATGCTTTGTGCAGAACAGAATTTTTATTTCAACAACTCTGAATCATGTCCATTCATTCGTTTAGAAAGTATTGTGACAATAAGTCATCTGCCAGGAACTGGGAAATGCACTAGAAATTCAAAGTCACATAAGACATGGACTCTTTCCCACAGGGCTTCTCAGTCAAGAGGAACAAACAAAATTTATAAGCCTCTCGGCTTATAAATTACCAACACAACTGTAATAAGACTCTAGAGGTGTCTATAAGGGGTGTAAATGCAGGAATGGGGACAACCACTTCACTGAGATTATCTGTTGTTTCTTATCTTCTAACACAATCTAATTACAAGGACACTGGGGTTCTGGGTGGAAGGGGCCATCCTCAGTAAAGCGTTGACTTGCTGAACAGCCCAGTATTTCTGATCTGCATGGATAGGCAGGCAAAAGGCAGCAGTTTCAGCTTAAAAATGATGGCCAGCAGGAAGAAGCTGGAAGAATGTAAAGGAATGCTGTGGCAAATATTTTTATCTAGATTATTGAGGCTGGTTTCTTGGCATGGCATAAGTGTTTTATTCTTGGCAATTCTCCGTATGATAAAGACATGTTCAAAATCAAATTCAACTTTCTAAAATGTTTCTTGAATGCATCCATCCAAGCCACCTATGATCACATTTAAATAAAAAATCTACCATCTTGAGAGAGATAAGAAATGATGTGTATGCAGTTATTAGAACAAAAAAACTGGAACCTAGTGACAAAAGTAATCAAATATCTTAATTCTTTGGATCTCTGGTGAGGACTCAAAAATTGGGAGCAACCTCTTCTGGCTGAAGAAAATGTTAATGGTTATAAAAAATTTAGTACAAATACTGAAGAATTTACAAAGCAACAGTTGCAAAAGCAACGTGCATATGGAACTTACTGTGGGGGGCAGTCCTAAGATGGCAGAGGAATAGGATGGGGAGATCACTTTCTCCCCCACAAATTCATCAAAAGGACGTTTAAATGCTGAGTAAATTTCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAGCCCATTTTCTTCTAAAGGAGATGTTTTATCAATGGTGCTGTATAGAAGGAAAAGTCTTGAGACTACTGTAAAAATAAGACTGAAAACCAGAAGAAGGAGGCTTAAGTCCAAATCCTGAGAACACCAGAGAACTCCTGACTCCAGGGAACATTAATCAATAGGAGCTCATCAAACGCATCCAAACCTACACTGAAACCAAGCACCACCCAAGGGCCAACAAGTTCCAGAGCAAGACATACCATGAAAATTCTCCAGCAACACAGGAACATAGCGCTGAGCTTCAGTATACAGGCTGCCCAAAGTTACTCCAAAACCATTGACATCTCATAACTCATTACTGGACACTTAATTGCACTCCAGAGAGAAGAAATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCTATAACCAAGAAATCTTAACAAGCCACCCGTACAACCCCACCCACAGTGAGGAAACTCCACAATAAACAGAACTCCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACTCAGCAATATAAACAAGATGAAGAGATAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCTGAATAATGATAGTGAAAATGATCCAAAATCTTGAAATCAAAATGGAATCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTGACAAGGACCTAGAAGAAATAAAAAAGAGTCAATATATAATGAGTAATGCAATAAATGAGATCAAAAACACTCTGGAGGCAACAAATAGTAGAATAACGGAGGCAGAAGATAGGTTAGTGAAGTGGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGAAAAAAGAAAAACGAATTAAAAGAAATGAGGACAATCTCAGAGACCTCAAGGACAATATTAAACGCCCCAACATTCGAATCATAGGAGTCCCAGAAGAAGACAAAAAGAAACACCATGAGAAAATACTTGATGATATAATAGTTGAAAACGTCCCTAAAATGGGGAAGGAAATATTCACCCAAGTCCAAGAAACCCAGAGAATCCCAAACAGGATAAACGCAAGGCGAGACACCCTAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAATACACAAGGGGATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAGGTCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTACTGTACCCAGCAAGGATCTCATTCAATTATGAAGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTGAGAGAATTCAGCACCACCAAATCAGCTTTCCAACAAATGCTAAAGGATCTTCTCTAGACAGGAAACACAAAAAGGGTGTATAAACTCAAAGCCAAAACAATAAAGTAAATGGCAACAGGATCATACTTATCAATAATTACCTTAAACATAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCAGAATGGAAACAAAAACAAGACCCCTATATATGTTGTCTACAAGAGACCCACCTCAAAACAAGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATATTCCACACAAATAGAGACCAAAAGAAAGCAGGAGTAGCAATACTCATATCAGACAAAATAGACTTTAAAACAAAGGCTGTAAAAAGAGACAAAGAAGGACATTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATACATATGCACCCAACATAGGAGCACCACAATATGTAAGACAAATGCTAACAAGTATGAAAGAGGAAATTAACAATAACACAATAATAGTGGGAGATTTTAATACCCAACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAACACAAACTTTAAACGATACAATAGACCAGTTAGACCTAATTGATATCTATAGGACATTTCACCACAAAACAATGAATTTCACCTTTTTCTCAAGCCCACATAGAACCTTCTCCAGGATAGAACACATCCTGGGCCATAAATCTAGCCTTGCTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTACAACATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAAGCAAAATATGCATAGAAACAAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTACTAAGGGGAAAGTTCATAGCAATACAGGCATACCTCAAGAAACAAGAAAAAAAATCAAATAAATAACCTAACTCTACACCTAAAGCAACTAGAAAAGGCAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTAAAAATTAGGGCAGAAATAAATGCAAAAGAAACAAGGGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGAATAAATGAAATTGACAAACCATTGGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAATCAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATTATAGGAGATTACTATCAGCAATTATATACAAATAAAATGGACAACTTGGAAGAAATGGACAAATTCTTAGAAAGTACAACTTTCCAAAACTGAACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGAAATTGAAACTGTAATCAGAAATCTTCCAGCAAACAAAAGCCCGGGTCTAGATGGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCT TCONS_00014275 TCONS_00014281 r 3' 33293 TCONS_00014275 TCONS_00014281 r 3' 37938 EMBV3_34373 GACGTCCTGCTCCCGTTGCTGCTCATCTTACCAGTCTGCCTCTGATAAAGGTGAATTGCT Gene GeneID:508936|OSBPL7:XM_002695914:271_cdna Constitutive 0 NULL GeneID:508936 19 GENE OSBPL7 NULL oxysterol binding protein-like 7 EMBV3_15745 TTTGATTTTGGTTATTGCAGAGCCCTGGGGAGAAATCCGATGGGAGGAGGGGTGATGGCT Gene BVT0102_250087 - 1 EMBV3_25031 GK000024.2:53505215-54044119 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140565 TCONS_00140567 TCONS_00140564 1 XLOC_085155 NonCoding TCONS_00140567 XLOC_085155 NonCoding NonCoding - 24:53610337-53632736 - TSS104884 733 1 TCONS_00140567_2 87 0.410641200545703 3 0.967407804268238 9.28082905261219e-05 0 3.02836833058431e-53 1.13289853242802e-05 1.46089338324171e-05 1.6612650429809e-313 0.00026703230190136 0.000104899541150109 5.29966989438789e-05 3.94397452251643e-05 3.12301721563889e-06 0 0 0 8.03199322562663e-05 3.60321055236989e-05 0 0 0 1.60821023687168e-06 8.28302744069512e-06 0 0 0 0 0.000512708762021886 0 0 1.32458437991841e-05 4.91988980880335e-05 XM_594211.5 LOC516074 PREDICTED: Bos taurus nuclear pore glycoprotein p62-like (LOC516074), mRNA. 5e-28 129 75.13 0.26193724420191 0 noncoding 1 1 1 1 0.0985347348126411 0.704220148574271 -0.029520475634929 0.568556253417971 CCAAAGCAGAAGAGATACTACAGTATGCAAGGGCTGAAAATGGAGAAGGAAGAGTCCTTACCACGCTTAGCCCTGATCTGGCAAGGGAAAGGTGCCATTACCACAGTCCCACGTAGAGTCATGAATTTGAAAGGAATGGTGACTTTTGGCCCAGAGTTGCCGCTATCCTGATGTGAACACTCAGAAAGAGCTGGAAGACAGATGCTCCAGCCATCACCCCTCCTCCCATCGGATTTCTCCCCAGGGCTCTGCAATAACCAAAATCAAAGATAAATGCAGAAGAATAGAAACCAACATTATGCACCCTTCAGTGAGACAATGGGCCAGGAAGGATTACTGGAGTGAAGAAGTGGTTTCAAGGGGTTGACTGTGCTTAAGAAGGACAGCCCCTCCAGCGTCAGCAAGGCCCCAGATATCAAAACATCAGAGCATAGACAATAAAAGACAAGGCTAACGCAGGGAGAAAAAAGATGGCGGGTTGGAGGAAAATTAAGACGAAAGATACAGGGACTTCCCTGGTGATCCAGTGGCCAAGACTCTGCACTCCCAGTGTAGAGGGCCCGGGTTCCATCCCTGGTCAGGGAACTAGAACCTACATGCTGCGATTAAGAGTTCGTATGCCTCAACTAAGGACCTCAGATGTCATGAATAAAAGACCTCGTGTGCTGCAACTGAAGAGCCTGCATGCCTCAACGAAGATCAGAGATCCAGTGTGCCTCAACCAAGACCCAGT TCONS_00139315 TCONS_00139316 TCONS_00139317 TCONS_00139318 TCONS_00139319 TCONS_00139320 TCONS_00139321 TCONS_00139329 TCONS_00139334 r 3' 100823 TCONS_00139315 TCONS_00139316 TCONS_00139317 TCONS_00139318 TCONS_00139319 TCONS_00139320 TCONS_00139321 TCONS_00139329 TCONS_00139334 r 3' 101195 EMBV3_18927 CAGGGTCTCTCTCTACCTGTGCACTTAAGAGTAACTGAAGATCAAACTAAGCCTACAGAG Variant GeneID:515194|MRPL39:NM_001080730:19_cdna 928^975 3 EMBV3_00273 GeneID:515194 1 GENE MRPL39 NULL mitochondrial ribosomal protein L39 EMBV3_34498 ACAGCTCCAGGTACTGTTCGCAGGGGAAGCCACACACCGGACGTTTTATTCCACCACACA Gene GeneID:282639|PAOX:NM_001013602:60_cdna Constitutive 0 NULL GeneID:282639 26 GENE PAOX NULL polyamine oxidase (exo-N4-amino) EMBV3_26802 TACTTATCCAGTTCCCAATTACTGGGCTCTTTAGAAATTCAAATAAATGCACTCACTAGA Gene BVT0102_083737 - 0 NULL GK000016.2:35950979-35974448 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17211 GTGGCTGAACTTGTAACCAGCGAGTTCTTTGAACAAGGCGATCGGGAGAGAGCAGAACTG Gene GeneID:524446|PDE11A:XM_002685264:73_cdna Constitutive 0 NULL GeneID:524446 2 GENE PDE11A NULL phosphodiesterase 11A EMBV3_37677 GGTCTGCACCATTCTGGTCCTTTGCTCTTGGCTGATTGGGTTAATTGTCATACTCCCACC Gene GeneID:526713|LOC526713:XM_002687590:671_cdna Constitutive 0 NULL GeneID:526713 5 GENE LOC526713 NULL similar to olfactory receptor 769 EMBV3_18713 GAGTTTCCGATCCACACGTTGGTGTTTGAATGAGTATGACGGAGGAAGAGCAGATGCCAG Gene BVT0102_168545 + 0 NULL GK000013.2:76518695-76847443 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31728 TGTGCCTGGCCCTGAAGCACCGGAATGGAGAGACGACCTGATCAGGGCCATCAAGAAACT Variant GeneID:505628|SNF8:NM_001075211:59_cdna 426^498 4 EMBV3_33333 GeneID:505628 19 GENE SNF8 MGC142498 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) EMBV3_20425 GCTCCCAGGCGTATTCTCCCATAGCATGTGGCTCTGATTGCCGAGGAGACGAGCAGCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10238 GACGGATACATCCCCATTCTTGGCAACAAGGGAAAAGTCCCACTCGTGGTTGAGCACAGG Variant GeneID:407222|ST6GALNAC6:NM_001001151:19_cdna 459^865 1 EMBV3_18748 GeneID:407222 11 GENE ST6GALNAC6 MGC139767 siat7f st6GalNAc-VI ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 EMBV3_16539 TGATTCGACTTAGGCTGCCCCTTTACCGGACCCAAATCATTACCCATTCCTACTGTGAGC Gene GeneID:617417|LOC617417:XM_002693411:91_cdna Constitutive 0 NULL GeneID:617417 15 GENE LOC617417 NULL similar to olfactory receptor 553 EMBV3_37323 TCCAGGACACCTGAAGGCTACCTGAACCGCCCCTTTGTGCTTAAAAGAAAGTGAGTTCTC Gene BVV0102_058219 + 0 NULL GK000007.2:27969709-28161047 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34464 ACCATGTTGCCAATAGCGTGCCCTTCATTAAACTGGAAGATGTCTTTGTGGGGCTCTGCC Gene GeneID:614873|B3GALT5:XM_002685109:15_cdna Constitutive 0 NULL GeneID:614873 1 GENE B3GALT5 NULL UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 EMBV3_27915 CAACTGACAGATGTGAGAACTGAAGTGGGTACGTGCTCTGGCCAGCATGAGTCAGTGAGT Gene BVV0102_188974 + 0 NULL GK000004.2:61710128-61810263 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181726 1 XLOC_110676 NonCoding TCONS_00181726 XLOC_110676 NonCoding NonCoding - 4:61746043-61751931 - TSS135941 899 3 TCONS_00181726_2 44 3 0.847800237812128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00331324434120922 0 0.000759853288277435 3.27442137230886e-09 0 0 0.000240702138816458 0.000102406945137303 0.000831216810771089 0 4.0404184936169e-09 0 0 0 0 XR_230895.1 LOC101906333 PREDICTED: Bos taurus uncharacterized LOC101906333 (LOC101906333), 0.0 711 100.00 0.437152391546162 0 noncoding AGTAGATGGAACTACGTTGGTCAAGTCTGGATCTCAGGTTCAGCAGGCTGAAGACTGGTTTGGCAACCCATGAAATCTGCAAGAAGGGGTGGATCACTGCTCCCAAATGAAATAATATACAGTACTGGAGGAAGATAGGGGAGGAGATGCTGCATAGACACAACTGACAGATGTGAGAACTGAAGTGGGAACGTGCTCTGGCCAGCATGAGTCAGTGAGTCAGAGTCAGAATAGAATGATGTGAAAATGGGTTCAGAGGGAACAGAAATGAAGCCTATCATCTACTTTGAGAGGTTGGAGAAAAGAGGAAACCATAGAGCATACTCTGAGATGGGCAGCCTTCCAAACATCACAATTACTTCTGTGGAAAAGCAGAGCTAAGACTGAGAGGGTAAAAGTCCAGAAAGTCAATGGCCGGGCTGGATTTGAAACTTGTTTTGTGCATCTGGAGATAAAGAAGTCAAGGGGCCAAGGAAAGAATAGAGTTAATGACCCACATGGTAGTCAACGAGTGATCCTGGAGCGGTGGCTGCTACTATGGGAAGAGTACAGAGGCTGAGAATTGGAGAATCAACCACTAACATGGAAGGGTCCTTGGGCTGAGACCTTTCCATGGTTTATTTTGTTTTACTATAAATCATTTACTTAATACACTGTAGTTCTTAGGATAATACACTCTGTATTAATTTATGACCATTATCGAGTTGAAAGAGAAAACACAAAATTTGTATACGAAAGAAAATATGTCTCAAATTGTTTTCTTTAGATCCAGGACTGAATGTAGGAAATGAATGCCAAGACTCATTATTTAAGGGTTGCCTAAACTCTAACAGTTTTCGAATGATCTTAAATCCCAGTCAAATTGGCAATGGAGTAGTTTAACCTCCCCCCCCCAAAAA TCONS_00184209 r 5' 35001 TCONS_00184209 r 5' 35001 EMBV3_38070 CATCAAGAAGACCCGTAGACTGAAGGCCAACAACCGCGAGCGCAACCGCATGCACAATCT Gene GeneID:615555|NEUROG2:NM_001144105:77_cdna Constitutive 0 NULL GeneID:615555 6 GENE NEUROG2 NULL neurogenin 2 EMBV3_22689 AAGGGAATCCGTGAGAAGCTATGACCTCCCTTATCCAATCTCCACCTCAATCGACAGTGG Gene BVV0102_193882 + 0 NULL GK000018.2:14535554-14543383 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082364 1 XLOC_050992 Coding TCONS_00082364 XLOC_050992 Coding Coding RPL13 18:14533115-14536976 j TSS62147 1312 1 TCONS_00082364_2 211 7 0.661917098445596 3.7309221742965e-10 0.000237257217045555 2.50596349561663e-10 3.03618487032155e-05 1.80331628110191e-05 1.67651499035362e-10 4.08014635818957e-15 1.07640667875976e-11 0.000379359432326756 0.000865413439786023 0.000608615747238136 0.000197966924330751 0.000189082951280606 1.41691954251461e-05 2.26447253284488e-89 0.00485913474339082 0.000909241680903853 0.00372494847230988 8.96728335063987e-22 3.82325030578298e-16 9.69251888846334e-20 0.00492458047794202 0.00376426241295476 0.00229949698607704 2.18362286399594e-10 1.34180451623158e-10 2.18430145645815e-10 0.000266540791927463 0.000336342855647629 0.0012726547720959 NM_001015543.2 RPL13 Bos taurus ribosomal protein L13 (RPL13), mRNA. 0.0 1319 99.73 0.560213414634146 NM_000977.3 RPL13 Homo sapiens ribosomal protein L13 (RPL13), transcript variant 1, 0.0 888 89.85 0.502286585365854 TCONS_00082364_2 sp|Q56JZ1|RL13_BOVIN RL13_BOVIN 60S ribosomal protein L13; 7e-152 425 100.00 0.995260663507109 1 coding 0 0 0 0 -0.0421703057283951 0.759834050499826 0.0614758870192331 0.462175517467976 GATTGGCCGGGCCCACTACCATCCCAGGGTGCTCTGGGGCACTTCCTTCTTTCCCGGCCGTGAGCCCTCGGAGGAGGCCTTTCGGCCGCAGCCATGGCGCCCAGCCGGAATGGCATGATCCTGAAGCCCCACTTCCACAAGGACTGGCAGCGGCGCGTGGCCACGTGGTTCAACCAGCCGGCTCGCAAGATCCGTAGACGCAAGGCCCGGCAGGCCAAGGCGCGCCGCATTGCCCCACGCCCCGCGTCCGGTCCTCTCCGGCCGGTGGTGAGATGCCCGACGGTCAGGTACCACACGAAGGTTCGTGCCGGCAGGGGCTTCAGCCTGGAGGAGCTAAGGGTGGCCGGCATCCACAAGAAGGTGGCCCGGACCATTGGGATCTCGGTGGACCCGAGGCGGCGGAACAAGTGCACGGAGTCCCTGCAGGCCAACGTGCAGCGGCTCAAGGAGTACCGCTCCAAGCTTATCCTGTTCCCCAGGAAGCCCTCGGCCCCCAAGAAGGGAGACAGCTCTGCTGAAGAGCTTAAACTGGCCACTCAGCTGACCGGACCTGTTATGCCCATACGGAACGTCTATAAGAAGGAGAAAGCCAGAGTCATCACAGAGGAGGAGAAGAACTTTAAGGCATTTGCCAGTCTCCGTATGGCCCGCGCCAATGCCCGGCTCTTTGGCATCCGGGCGAAAAGGGCCAAGGAAGCCGCAGAACAGGATGTTGAAAAGAAAAAATAAAGTGCTGTTGGCAACTTGTGATAAACCTGCAGTGTCCATGTGACCTTCGTTGTGTGGACTCTTTACTGCCTGAGCCACCAGGGATGTTCAAGCCAAAGAGCAGAGTAAGGGACACCGTGTAAAAGAGCTGATGGTCCTCTTTATTTAGGTCTCATATAGGTGGTTGCACTTGCTATTTTTCTTGTGTGCTTTCAGGGTGTTACAGAGGAAAAATAAGGTCTTTGTTTCATAAAAGATCAGATGTAAAGGGAATCCGTGAGAAGCTATGACCTCCCTTATCCAATCTCCACCTCAATCGACAGTGGTTTGTGCCTAGTTCTAGGAATTTACCAGTGTCAGTATTCTTTTTTGCTGCCTCAGCAGCTTAGAACCAGACCAGAGGACAAGGAGTGAGCTGCCTAACACAGGGCCAGCCTGGCATTGACCATCTTGGGACCGTAGAAGCTGATGACAAGCAGGTGCTGGGTGGAGAAGTTAGAAAGTGAAAATGCAGGGAGTTTTCAGGATGGAGAACAGGCACTCAGGCGTTGAGCACCCACTGTGTCCCAGGAACACAGCAGTAACCAAAACAACCCTAGCTCCA EMBV3_35415 CCATGGGGTCTTGGGACAACTCTGTAAAACTCAGTGATCCTCCTGTTGGCATCCATTAGG Gene GeneID:407230|HTR2A:NM_001001157:32_cdna UTR3_Alt 2 NULL GeneID:407230 12 GENE HTR2A 5HT2A 5HTR2A 5-hydroxytryptamine (serotonin) receptor 2A EMBV3_09473 CTAAAGGGTTCTGTTTCGTCCACCCCTACTGACTGTGTCCCTAGGGCTGAGCGATTAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09095 TAGATGTTTGGGGTCCTGGTGATTGATCTTTGTGCCTCATTGTTGACCTGCTTTAGGCCC Gene GeneID:100296489|LOC100296489:XM_002686024:450_cdna Constitutive 0 NULL GeneID:100296489 3 GENE LOC100296489 NULL hypothetical protein LOC100296489 EMBV3_27155 CTGTTGGGGGATTCACTGAACTCATCGGTAGCAACGGCCCACAGAAGTTTTGCATTGACA Gene GeneID:512457|WWP2:NM_001083414:204_cdna UTR3_Alt 2 NULL GeneID:512457 18 GENE WWP2 MGC142390 WW domain containing E3 ubiquitin protein ligase 2 EMBV3_04446 AAAACTTATGCAGATTGTGTGGTAGGAAGACCTGGGCCGCCGACGTTAAGCGGTATTCAG Gene BVT0102_237620 + 0 NULL GK000017.2:64742929-64752567 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077788 TCONS_00077789 1 XLOC_047145 NonCoding TCONS_00077789 XLOC_047145 NonCoding NonCoding - 17:64743145-64746195 - TSS58035 1665 2 TCONS_00077789_3 93 0.0498498498498499 3 0.454903246966218 0.000359548246803194 0.000790595812982395 0.000461451938586876 0.000443883985543868 0.00121279653114952 0.00127398982098821 0.000308221207190969 0.000266427474597836 4.6560397034551e-05 0.000123557982170705 3.52649621261314e-11 0 0.000337764886752587 9.32315244369133e-05 4.71457779543084e-05 0.0014493040156273 9.40010123064384e-10 0.000452083963055842 0.00064474257096166 0.000559209499539568 7.35724911835942e-12 0.00102953396371769 0.00061261032244801 0.000158105827512365 0.000607540960531147 0.000321594602331823 0.000278000891532309 0.000138452945995161 1.62046972925731e-05 5.41642453008983e-05 XM_005275727.1 LOC101928498 PREDICTED: Homo sapiens uncharacterized LOC101928498 (LOC101928498), mRNA. 2e-49 201 71.88 0.230630630630631 0 noncoding 0 1 1 1 0.241752636399574 0.260768293132491 -0.00605789068159482 0.939759068709118 TCCATGGAAGCAGGGACTTGAAAGCTTTATTTCCTGCCACCTCTCCAGCTCCTCCATCAGTGCCTGGCAGCTGTGAGCCCTCAAATGTTCACTGCCTCATCTTCCCCAGTTGTACTGTAAATTCCTGAGGATGGAGTTTTGTTTCGCTCCTGTGTGTCTTATCTCTGATGAGACTGAAAGCTCCTGGATGGGAAAAGCTCTATCCTAGAGTCTGTGGCACAGGAATTAACACCCATTGCCTCCTAGAAGGCACTCGGAGGCCGATTCTCAGCTCCCGGAAAAACAACTTAAAGCTTGAGTCAAGACACCCCATGTGCTACTCAAGGATCTTCCCTGCAACACTGTTTATCATAAGAGATTGTAAACGTGAATGCCTATCAAGAGCAGAGTGGTCAAATTATAGTATGCCAATGATGGAGTGCTCTGTGGTTGTGAAATGACAGAAGATCTAAGTATGCTGTTAAGAGAGAAAAGGCAATTTACATACATGTGTGTTCCACAGGCAAAGACAATTCATTGAAAGACATTTATTCATTCAACAAATATTTGTTAACCATTTTAAGGTATCAAGAAACTTAGTAACTTGTGAGGGGGTGGGTCTGAGGGGGTAAATGGTAACTTGTACTTTCTGGTAAGCTTCTGTACATTAAAAAAAAAAAAACTCCACAGGCATTACTTTGTATAAAGTCAAAATAAGTTTGGGAAAACAAGAAGAAATATCTAGCTTAGACTAGATTAAAAAAGGACAGAGCTAAACAGAAATCAGCAGTAACTTACATTTTCCCCCTGCAATTCTACAAAGGAGGATGACAGTAGGCGCAACATATTTTTAGTGCAGATAGGAAATAAAACCCGGAAAAAAAACCCAACCAACCCACCCTAGGGCTGATAATAACCTGAATACCGCTTAACGTCGGCGGCCCAGGTCTTCCTACCACACAATCTGCATAAGTTTTATCTGTAGGTGCGGTGCAACTGAAGCTGAGGGCGCTGCTGCTATCGATCTCAAGGGTGCATCTTACACACGGGGGCATTCACCTCGCAGGCCAGGGTCAAGTTGGAAAGCGACCCGGAATCTGGAACCTCTCGGTCCGCTTTACCAACGGGGCATCTCAGGCCCCAAGAGGTCGCGCGGGGCTGGGTTGTGACTGCCCCAGCGCTGCCGTCAAAGGCCACACTGCTCACACGGTAAACTCACACTGCTTACAGTGTAAAGCTTACACGTCCGGTAAAACTCCCGCAGCCTCCAGCCGCCCTCGGCGTCCAGTCCACGGGCCCCGGGACATGGTGGAGGGCCCGGAGCCAGCACCTCGTAGGCGGTGTCCAGGCAGATGGGGGCGGAGTGTCCTGAGTTCACAGTCCCGAGAAGCTTGGAGCTCGGCGTAAGCCCCGCCCCGCCCGGTCACTGCGTGCCAGTCGGTCCCTCTCCGCAGCGCTTGCGGGTCTTAAAGATGAAGCAACAGCAGCAAGTCCACCCCGGGCCACGGTCGGCCTCGCCCGGCACTCCGGGATTCTTGCAGCTAAGGCCTGGCTGCAGCTGCGCTCTCGGAGCTCCCAGCACAGCAGGCCGCGGACGGCGGGCGGGCGGCGGTGGTGGCGGCGACGGTCGCTGAAGAGCCACGGACAAGACAAGCCCGCGCCCCCGGGACCCCGACAGGGCGCAGG TCONS_00077786 s 5' 159 TCONS_00077786 s 5' 1564 EMBV3_08813 TGGCCATTTGTCGCCCCTTGCACTATGCTTCCATTCTCACCAACACAGTCATTGGCAGGA Gene GeneID:506897|LOC506897:XM_002693371:333_cdna Constitutive 0 NULL GeneID:506897 15 GENE LOC506897 NULL similar to olfactory receptor Olr69 EMBV3_01888 CCTTTGCCTTCCACTTTCAAGGTCTCACTGCAGCCTTGGCTCCTCCTGACTAAATTCCAC Gene BVV0102_297124 + 0 NULL GK000011.2:83188443-83655858 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028625 TCONS_00025739 TCONS_00025742 TCONS_00025741 TCONS_00028622 TCONS_00025738 TCONS_00025743 TCONS_00025740 2 XLOC_015525 XLOC_014818 NonCoding TCONS_00028625 XLOC_015525 NonCoding NonCoding - 11:83212756-83213859 - TSS20051 962 3 TCONS_00028625_1 81 2 0.128856624319419 0.000347084068668608 3.22092946744595e-21 1.83024658908159e-26 0.000799382297823859 0 1.13748911155561e-18 1.31160346765913e-16 5.97915772155959e-10 8.42868548110372e-08 0.000153971537084355 0 7.43267757834576e-06 0 0.000155287113049086 0.000173399724097893 0 0 0 0.000885049244160926 1.12780123586709e-11 0.00248185141275116 0 0 0 2.51590808172002e-46 0 0.000103319464968977 0 0 0 0 noncoding CTAGAAGGCAACCTGGGGAGGCAAAGCCATCCTGGAGGTGCAAAGGCACAGAGGCTCCAAGCTGTAGCGGACAGGTGGAATCAGGGAGCCAAAGGCCTTGAGGGGAACAGGAAATAGGCTAGAAAAGTCACTTAGGGAAATGCCTTGAGTCCTCACTGATGCGAAGCTTGGTGACGCCTCTGGGGAGTGTTTTTCAAGAAGTCCTGGCCAAGCTGGAAAGAGCCCAGAGAGGGTGACTGGCCAGGCGCCCCCTCTCCCCTCCAGGGACCCAAAATACAAGATGATGAAGGAGGAGGCTGGTGGAATTTAGTCAGGAGGAGCCAAGGCTGCAGTGAGACCTTGAAGGTGGAAGGCAAAGGGGCCCAGGAAACATGGAGAACCCCATTCTCAGGAGCCTCCCACGTGAGCTGGAGGAGCCGGGAGCCCCCCAAAGAGCCCAAGGTGGGGCCTCATCTCCTGCCATTCGCCATCACCACTGGTGCTTATGCTGTGACTCCCCTGCTCAGCCAGGCCCTCAGCAAAGCTCTTCTTGTGTAGTTCACTTATCTGTGGAGGCTTCATTATTTAAATCGCAACTAATCCCCATGTGCGGGCGCTTGCCTGAGAAGTCTGTTTAATTACCTCCCTTAAACTCCCCGGCGGTACACAGCCTGGTCTGCTTATTGATCACCCAGCCCCGCCCACGGCTGGAGCGGCTCCGGAGAACTGGTCAGGAGCAAATGCCAAGGGTCAGCATGCTCCTCCTTCTCATGCCTAGGTGGCCTCATGGTGGAGAACAGGGCTCAGGACAGTCCTCTGTTAGGACAGCATCCCAGGCCCCCACCGCCCATAACCAGGGCCTCGTTCAAGCCCTACTTTCTCTACAGCACCTTTCCTGCCCAGATTCCTTCTTCTCATCGTGATGACCCCAGGGCTATGCTCAATTGGTTGGACCAATCTCAGCCGGCAAAACTGACCCTGCC TCONS_00025721 TCONS_00025723 TCONS_00025728 TCONS_00025729 TCONS_00025730 TCONS_00025731 TCONS_00025732 TCONS_00025733 TCONS_00025734 TCONS_00025735 TCONS_00025736 TCONS_00025737 r 3' 24310 TCONS_00025721 TCONS_00025723 TCONS_00025728 TCONS_00025729 TCONS_00025730 TCONS_00025731 TCONS_00025732 TCONS_00025733 TCONS_00025734 TCONS_00025735 TCONS_00025736 TCONS_00025737 r 3' 24435 EMBV3_11440 TCGTGAGAAAGAGGAGAGTGAGGAACTGAAATCGGCCAGGAAACAGGAGCTGGAAGCACA Gene GeneID:522380|TCHP:NM_001164026:204_cdna UTR3_Alt 3 NULL GeneID:522380 17 GENE TCHP NULL trichoplein, keratin filament binding EMBV3_32157 CATGATGGTAGATGCCGCTTCATAATGTCACTGAAGTACCCCAACCACTGTCACTTATTT Gene BVT0102_123346 + 0 NULL GK000008.2:11543047-12392489 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14936 TCTGGATATGTGCTAGAGGAGATCTGGAAGAAAGCTGAGGAGGCGGTCAATGAGGTGAAG Gene BVT0102_122562 + 0 NULL GK000014.2:74733214-74832225 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052336 TCONS_00052332 TCONS_00052330 1 XLOC_031430 Coding TCONS_00052332 XLOC_031430 Coding Coding RUNX1T1 14:74671631-74790495 j TSS38838 5377 1 TCONS_00052332_3 566 11 0.954855590049048 0.00179259145443936 0.00112494186816357 0.00104336793257263 0.000359033911259159 0.000934688188710636 1.75597600044425e-08 0.000625884889919341 0.000135301922398776 0.000664396650683351 2.74333127289688e-08 1.53761905698253e-08 2.39522362527672e-08 7.2338514206493e-05 7.65099682179914e-11 3.32262227711841e-08 1.75085256208609e-07 0 0 0.000525572695835975 0.000426281056006652 0.00044406890203736 1.43135567331984e-63 5.96580602119283e-08 0 0.0010707011307144 0.00143561453960298 0.000568723256518818 6.46755666742694e-08 1.49841236799373e-09 4.01926059059694e-08 XM_005192663.1 CBFA2T3 PREDICTED: Bos taurus core-binding factor, runt domain, alpha subunit 2; translocated to, 3 (CBFA2T3), transcript variant X2, 0.0 893 73.86 0.26724939557374 NM_004349.3 RUNX1T1 Homo sapiens runt-related transcription factor 1; translocated to, 1 (cyclin D-related) (RUNX1T1), transcript variant 1, mRNA. 0.0 7357 90.60 0.970243630277106 TCONS_00052332_3 sp|Q06455|MTG8_HUMAN MTG8_HUMAN Protein CBFA2T1; 0.0 1088 99.12 0.998233215547703 3 coding 0 0 0 0 0.0490836524582962 0.667394282648906 0.0460211505527846 0.345848383863352 CTTAATACCCACTGTGTGAAGTCACAGTGTATCACAACAGCCTGCTCGAAGCAAGTGGAAAGTTGAGAAGACCTGTGGAAAAGCTTTAACTCAAACTCTCCCTTCCCCAGTGTAGAGAGCTTTCATTAACCGCAGTGTCAGAAGATTCTTAGTCCCTGTTGATCGTACCGAGAAGCACTCCACGATGCCAGACTCACCTGTGGATGTGAAGACCCCATCCAGGCTGACTCCTCCCACCATGCCACCTCCCCCAACAACTCAAGGGGCTCCCAGAACGAGTTCATTTACACCAACGACGTTAACCAATGGCTCGAGCCATTCGCCCACTGCCTTGAATGGCGCTCCGTCGCCGCCCAACGGCTTCAGCAACGGGCCTTCCTCCTCTTCCTCCTCGTCTCTGGCTAATCAACAGCTGCCCCCAGCCTGCGGCGCCAGGCAGCTCAGCAAGCTGAAACGGTTCCTCACTACCTTGCAGCAGTTTGGCAATGACATTTCGCCAGAGATAGGAGAGCGAGTCCGCACCCTCGTCCTAGGCCTGGTGAACTCTACTTTGACAATTGAAGAATTTCATTCCAAACTGCAAGAAGCTACAAACTTCCCACTGCGACCTTTCGTCATCCCATTTTTGAAGGCCAACTTGCCCCTTCTGCAGCGTGAGCTCCTCCACTGCGCGAGATTGGCCAAACAGAACCCTGCCCAGTACCTCGCCCAGCATGAACAGCTGCTTCTGGATGCCAGCACCACCTCACCTGTTGACTCCTCAGAGCTGCTTCTCGATGTGAACGAAAACGGGAAGAGGCGAACTCCAGACAGAACCAAAGAAAATGGCTTTGACAGAGAGCCTTTGCACTCAGAACATCCGAGCAAGCGGCCATGCACTATTAGCCCAGGCCAGCGGTACAGTCCAAATAACGGCTTATCCTACCAGCCGAATGGCCTGCCTCACCCCACCCCTCCACCGCAGCATTACCGTTTGGATGATATGGCCATTGCCCACCACTACAGGGACTCCTATCGACACCCCAGCCACAGGGACCTCAGGGACAGAAACAGACCTATGGGGTTGCATGGCACACGTCAAGAAGAAATGATTGATCACAGACTAACAGACAGAGAATGGGCAGAGGAATGGAAACATCTTGACCATCTGTTAAACTGTATAATGGACATGGTAGAAAAAACGAGACGATCTCTCACAGTACTGAGGCGATGTCAGGAAGCAGACCGAGAGGAGCTGAATTACTGGATCCGGCGGTACAGCGACGCTGAGGACTTAAAAAAGGGCGGCAGCAGTAGCAGCAGCCACTCCAGGCAGCAGAGTCCTGTCAATCCAGACCCAGTGGCGTTAGATGCACATCGGGAGTTCCTTCACAGGCCTGCTTCTGGATATGTGCCAGAGGAGATCTGGAAGAAAGCTGAGGAGGCGGTCAATGAGGTGAAGCGGCAGGCCATGACCGAGCTGCAGAAGGCCGTGTCCGAGGCCGAGCGGAAGGCGCACGACATGATCACGTCGGAGCGCGCCAAGATGGAGCGCACGGTGGCCGAGGCCAAGCGGCAGGCGGCGGAAGACGCGCTCGCCGTGATCAACCAGCAGGAGGACTCCAGCGAGAGTTGCTGGAACTGCGGCCGTAAAGCCAGCGAGACCTGCAGCGGCTGTAACACGGCCCGATACTGTGGCTCCTTTTGCCAGCACAAAGACTGGGAGAAGCACCACCACATCTGTGGACAGACCCTGCAGGCCCAGCAGCAGGGGGACACGCCTGCCGTCAGCTCCTCCGTCACGCCCAACAGCGGGGCCGGGAGCCCCATGGACACACCACCAGCGGCCACCCCCAGGTCGACCACCCCAGGGACCCCTTCCACCATAGAGACGACACCTCGCTAGACGTGCACTCAGAACTGTCGGAGGAAAGACAACACAACCAACACGAAACCAATTCCTCATCCTCAGATGCTCAAAGTTGTTTTTTTTTTTTTTTTCCTTTTTTTGTTTTGTTTTGTTTTGTTTGTTTATAGACGAACTATCCTGTTTCAGTACTTTCAGCAAGAGAGAACCTAACTGTATCTTGAGGCGATCGTAAAACAGAAGGCCAGTAACGGGTCATAATGACTTATTGTGGATAACAAAGATTTCTTTTCCTTAGAGAACTGAAAAGAGAGCAGAGAATATAACATGAAATGATAGATTTGACCTCCTCCCTGTTATTTTCCAGTAGCTGGGATTTTAAACTAGATGACCTCATTAACCGATGCTTTACCAAACAGCAAACCAAGAGATTGCTAATTGCTGTTGAAAGCAAAAATGCTAATATTAAAAGTCACAATGTTCTTTATATCCAATAATGGAAAAAAAAAAAAGAGGAAAACCCTCAAGGGCATGAGCATTGGCTACAGCAGTAGACATTTTAACGAGAAGATGAATGGCGTCCGTGGGTTGCTAACTGAACTTTGAAGACCCGCTACATAACGCGCAGATGTGTAGCAAATTGGAAGGAGACACAGATGTTCGGGTTTTTTTTTTCCTGTTTCTGAAAAGAAATAATAATATCCAGGTCAACAGAAGGAAAAATGAAAGATGATTTTGCAGTGGGATATGTGAACACAACAGCAAGAAAAAAATGCCATAACACAAAAGGCTCCTTTATATATATATATATATAAAATTATATATACACACACACACAGAAGTAAGAGACTCAGCCTGCAGTTATTAGCACCCTGGCAGCTCTGACACCAGCCAGCTGCTCTAAACAACCCTCAACGTTTCTTCACTTTTGCAAGGTTCCACAGAGCAAGACATTGGGTCTATTCCAGCTCATTCATTTTATATTGAAAAATAATTTTTAAAAAAATGGTGGCTCCAGCTCCAGCCCCTTTCTAAATTTTTTCAACCCCACCCTGTTTGGATTTTTAATTAAAAACTAGTAGTTCTCTTGGTGTTAAAACACTTCTGTCCTGTGAGGTTTCCCAATGGTGTTTTTCTTGTAAACGTGCTGGACGACTGTGAAGACGCGTTGTAGTTTAACCACGTGCCCACATTTAGTCTCTTTATTCCTAGTTGGTGAGAAACCTGTATCTTTCTATGCTGCTTTTATATCTGTATGTATTAGTGGTATTTCTCTAGTAGTTAAAAAAAAAAGAAAAAAGAAAAAAAAAGACTTTTTTGGTTGTCCTCAAGAAAAGAAAAGAAAAAGGCTATCTTTCGGAGCTGCTATTTCACTCTCTTATAGGATTTTTTTTTCCCCTGAAAACCAGCATGCTTCACGGAATGCTAACATATTGGTGTTTTTGTAAGAGGGATGTACATAAATGTATTTTGCACTGTCACAATGACTCCCTAGGCATGCTTTTTTTTTTTTTTTTTGAGCAAACTTTTTAAATATGCTAGATCCATTCCACCAAGTTTAGCTGTAGCATAGAGTAGTAGTGGATTTTTTTCTTTTCTTTTTTTTTTTGATGAAAAATCATTATTAGGGACTTTTGAAAAAAATAACAAGATATCCTACTTTTAAAAAAAGACAATGCATGTGTATCGCTGTAAGGTTGTTTAAGTATTTCTAATTTTACAAAAAAAAAAAAAAAAAAAGATAAATCATTAGAGCTCCAAATGCTGAGGTGTAGACTGACAGCTTTAACACTGCTGAATGCCAGGTTACACAGTATTCTTACAAAAAGGGAAGTCAGCCAAAGACTGATCTGATGGACCAAAATTGGAATTTTGAAAAGCACCAGTACTACTTTCCAAAATGATCAGCAGGTTAAACATGTTCAGCAAGGTATAGTGTGAATCCATTAACCCTTCGTCGTCCAGGGTCCAGACCAGAACTACTTGTTAGTTTTGAAAATGGTAGCCCAGAATGTGGTTGTGTGCTTTATGGAAAGTCAGCAGTGCTGCAGGCTGTGTAGACAACCAAAGTTTTCAAGGCTGGGAAGACACTACTCCATGTACATATACACACCAGGCATTTATTTAAAAATCTAAAGTGGTCCGTTAACTTGGGTTTGGTTTTGTTTTTAAATAAAGCCTTTGGATACAGTTTTACATGGCTTTTAAATATCTGCATAGAGGTAATCCTAAATCTCTTTAGCCTAACATTATTTGCATTTCCCCCTGTATTTTCATGTACAAGTTGGCTTTAATTTTGTTCAGGTGGTGGTTTTGTTTTTGTTTTTTTTTTTGGCTTTTTAGTTTAGAAACTTCTGATGAGCAAGTGAATCCATCTATCCACATGTTGAAAGTCCATCTGCCAGCACACCTGCTTAAAGTGACATGAAAGCACATAACCAGGCTCTGAATGGGTTATATTTTATCATGGTGCTCCCAGAATCCTTTGACCTCACTCTGCTTTCTAGTCTGCTAATGACACTGGACAGTCCTTTCTTACAGAGCTATTATATGTTCTAGGCTACGAAGGGTTAAATAATCCCAAAAATGAGGTATGTCATACCCACACGTCTTTATTTCTAGAAGCTGTGATGTATGTGAAACAGCACTGTTATTCTTAACACTAGTGTGTAAAATAAGGATTAGTACAGTACGTCTCATTACTTTTAATTCAGGGCACCCTGAGTGAAAACAAATACAAAAAAAATCCCTAACTCTGAGCTCTATCTCGAATTCCTCTTCCTCCTTCCCCACTTCCTCCTCCTCTTCCTCTCCTCCTGTTTTGCTACATTCTCCTCAGTGGCAAAAAGTTTCACTCTACCTCTGACAGCATGTATATTGCACCAGTAGCTAACAAAAACTGGTCTAGTCAAACCAAATGGGCACAAAAGAACCAGGATACCAAAAGTTAAGCTCATACAGCTGCAAACCATATCACTTCTTGGTAACAATGCAGACCTCATAAACCTAAAGAAGAGAAAGAAAAGAAAACTTTTGTTACTTTCCTTTTTTGCTTGTCACTTATATACAGGCTATGTGAGAGTATAATTTGTAGGTATAACACATTTAAAAAAAAAAGTTATCTTCATTGGATAGAAATGAATGGTGGTCGCTGATAGGAATAGGGCGTCCTCGATCTCTTATCTCTGTCTCTGACTCTTTTCTCTTTCTCTTTTTTTCTCTGTCATGAGACTGTGTGTGACAGGGCCACCTGTCTTATTTTTTTTTTGTTTTTCTTAACTTTTTTTTTTTTTAATGTGTAGGTGCATGTCTTGGGGATTTAAAAAAAATTTCAAGGCTGGTTTTCTTATGCAAAGCATGCCTACGTCTGGAATACTTAGGGAAAGAAAGCGACTCCATGTTGTCCGAATTCCTCAAGGGACAGAAAAAAAATTGGAGACTGTCGAAATGCAGATTTGAAGTATTTTTTTTTTAATATTATTTTGGGTTCTGCGACATTATTGTGAAAAATTAAAGTTGTTGTGCAATACT EMBV3_17302 GACGATGGGAATAAAGCCAGTCAAATGCTACCACATCAATTAAGGAAACAGCAGGCCTCC Gene BVT0102_209892 + 0 NULL GK000011.2:76903739-77492987 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10863 GGAGTGAGTCCCACCTACAATGCACTGACAGAAAGAGAGAAAGATGTGCTTGCGTCAAAG Gene BVV0102_273759 + 0 NULL GK000007.2:39919801-39936163 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28614 GGAAAGAATCAAGGCAAGCGCTACGGAACGATTAGACAAACACTCCACAGCAACCCCTTC Gene BVT0101_044230 + 0 NULL GK000022.2:12469484-12471290 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126090 TCONS_00126092 TCONS_00126089 TCONS_00126088 TCONS_00126091 TCONS_00126086 1 XLOC_077366 Coding TCONS_00126091 XLOC_077366 Coding Coding WDR48 22:12417627-12470808 j TSS94672 5309 1 TCONS_00126091_3 668 19 0.900526513726965 0.00208820793132767 0.00125637330063972 0.00326242569300715 0.000490466147276691 0.00334427294672748 1.99482704137723e-10 0.00142189973860353 0.00319630277223701 0.00236260749596345 9.59012461497713e-05 6.24407242294828e-05 8.70444507696956e-07 0.000140874872403878 0.000299359677990791 0.00163097693676004 0.00409329517324538 0.00104107324934478 4.28223782638383e-06 0.0028289288734088 0.005509055264931 0.00188627074618796 0.000841217083491677 1.0643812375657e-05 0.000380146506344009 0.00513105252477198 0 0.0032895100432568 2.83814869470219e-14 2.53871432233487e-07 1.1721427490061e-06 NM_001076524.1 WDR48 Bos taurus WD repeat domain 48 (WDR48), mRNA. 0.0 7036 99.97 0.735166698059898 XM_005265347.1 WDR48 PREDICTED: Homo sapiens WD repeat domain 48 (WDR48), transcript 0.0 4890 87.79 0.735166698059898 TCONS_00126091_3 sp|Q32PG3|WDR48_BOVIN WDR48_BOVIN WD repeat-containing protein 48; 0.0 1377 99.85 0.988023952095808 2 coding 0 0 0 0 -1.37748154028661 0.0112209954934658 -0.0196356277509975 0.714962294031281 GTATAATATTATTCAGAAGTGAAGAGTCACCTAAGCCTCCCGTGTGTTCTTTATGCCTTCATGAATACAGTTTTGTTTTGGGTTTCCTATGTTATTCGAGATGAAGTGGAGAAGTACAACCGGAATGGGGTCAACGCCCTGCAGTTGGATCCAGCACTTAACAGACTTTTCACGGCCGGTCGAGACTCCATCATAAGAATATGGAGTGTCAATCAGCACAAGCAAGATCCATATATAGCATCTATGGAACACCATACTGATTGGGTGAATGACATTGTACTCTGTTGTAATGGGAAAACATTAATATCTGCTTCTTCTGATACAACAGTAAAAGTATGGAACGCACATAAGGGATTTTGCATGTCAACATTAAGGACGCATAAGGATTATGTAAAGGCCTTAGCGTATGCCAAGGATAAGGAACTCGTAGCATCAGCTGGATTGGACCGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCACTGACTGCCTCAAATAACACCGTCACAACTTCTTCTTTAAGTGGGAACAAAGATTCCATTTATAGCCTGGCAATGAATCAACTGGGAACAATCATTGTATCAGGGTCCACTGAGAAGGTTTTAAGAGTATGGGATCCAAGAACATGTGCAAAACTAATGAAGCTAAAAGGGCACACGGATAATGTTAAAGCGTTGCTGCTGAACAGAGATGGCACACAGTGCCTTTCCGGCAGTTCAGATGGGACAATCCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACGTATCGAGTGCATGATGAAGGTGTGTGGGCTCTGCAGGTCAATGACGCCTTCACACACGTGTATTCTGGAGGAAGGGACAGGAAGATTTATTGCACAGACCTAAGAAACCCTGATATTCGGGTGCTAATTTGTGAAGAAAAAGCGCCAGTTCTCAAGATGGAACTTGACAGATCAGCTGACCCCCCTCCTGCAATTTGGGTTGCAACAACAAAGTCTACAGTAAATAAATGGACATTGAAGGGAATTCATAATTTTAGAGCCTCTGGAGATTATGACAATGACTGTACAAATCCTATAACACCCCTTTGTACACAACCTGACCAGGTTATTAAAGGGGGTGCTAGTATTATTCAGTGTCACATTCTTAATGATAAGAGACATATATTAACCAAAGATACCAATAATAATGTGGCATATTGGGATGTCTTGAAGGCATGTAAAGTTGAAGATTTGGGCAAAGTGGATTTTGAAGATGAAATTAAGAAAAGATTTAAGATGGTATATGTACCAAATTGGTTCTCAGTAGACTTAAAAACAGGGATGTTGACAATTACTTTGGATGAGAGTGACTGCTTTGCTGCTTGGGTTTCTGCAAAAGATGCTGGCTTCAGCAGCCCCGATGGGTCGGATCCAAAATTGAACTTAGGAGGGCTTTTACTCCAGGCACTCCTAGAATATTGGCCTAGGACACATGTGAATCCAATAGATGAAGAAGAAAATGAAGTAAATCACGTAAATGGGGAGCAGGAGAACCGAGTACAGAAAGGAAATGGCTACTTTCAAGTGCCCCCACACACCCCTGTGATCTTTGGCGAAGCTGGAGGTCGCACCCTCTTCAGGCTGCTCTGCCGAGATTCTGGGGGTGAGACTGAGTCCATGCTTCTTAATGAGACGGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCCAAATTCAACAAAATTCCTTTCTACCTCCAACCTCATGCATCTTCAGGAGCAAAAACCTTAAAAAAGGACCGACTTTCTGCTAGTGACATGCTTCAAGTCCGGAAAGTAATGGAACACGTCTATGAGAAAATCATCAACTTGGATAATGAGTCTCAAACCACTAGCTCTTCTAATAATGAAAAACCAGGAGAACAGGAGAAAGAGGAGGATATTGCTGTATTGGCAGAGGAGAAAATTGAGCTTTTGTGCCAGGACCAGGTTTTGGATCCAAATATGGACCTTCGAACAGTGAAACACTTCATATGGAAGAGTGGTGGTGACCTCACCCTCCATTACCGTCAGAAGTCCACGTGAAGGGCAGGCCAGCACTCCTGGGTATTCATTTACTGACCTTCCTCTATGGCCCCAAGAGTAGTCCTAGGAAGCCCAGAGCCCCAATGGGAACAAGACTTCTAACGACTGATTTGGTATGGACCGAGATTATCTTTCCATTGAAGTGACTAATCAAGATGTAATATAGAAACCAGTCTCCATGTGTAGATTAAGCTGTCCCAGGGGAGGCAGAGTGCCAGAGCAGAAGAGCCCCAAGCAGGCTGTGTTGCGAGATGTACTGAGGACTGAAGAGAGGCCAGCACAGATTTTGCTTCCTCCTTTTGTTTCCAAGGACCTTATCTTGATCTGTTAGCACTTGTCAGAGACACATGGTAGGGCCACGTCTGTCACTGTGTTCCAACTCCAATCCCACACACTCGGGAGCTTTTCTAAGAGTACATTCCATCTACGCAGTACCTATGAAGGCTTTTTCCAAGTTTGTCATTAAAAAAACAAACAAGTTGTTTTCACCATTTAAGACAGTTATTTTTAATAGGAATTGGCTGTTGCACAATTCAAGAGCCAGCCCATTTCATAATAAATGATTACTGTTGGGCTTGTTTTTAATACTGCATCTCAGATGTGTTGTTGTAGGCAGATCTGTCGAAACCCCAGGTGCTGGGTCACAGCGCTTGGACTGCCAGCCTAGACTGCGCCCAGTCCATGCCCAGCTGGGACGCCTGGACTGCGCGGCAGCCGCAAGGAGGCGCAGCTCTCTCACGCCTTCCTCCACTGTGTTTTCTTTATGGGCAAGACCAGGTGACACCACAGGGTCTTGCTCCGGGTGAGCAGCACGACACCATCAAAACTTAAGACCATAATGAGATCCTAACTTCATTTCAATGCTACCTAATATTTCTGGTGTCAGAGTAAAAGGGTATCGTAATGAGTTAATTTGATATTCATGTCCTGGAAGTATACATGTTTTGTTTTTTCCAGTTTTATATGCAGGTTTGTGTTGTTGTACCTGTATCCAGATTTCTTTTCACTGTTCTTTCTAACAATCTAAAGCTTTCATAGAATCATTTCGATCTTGTACAGAATATAACTTATTGGGGATAAACACTTTAACTTTTGGCAGAAAAAAACATACTTTGGATCCTCCCCAAGGTCATTTGTACTCGGAATAGAACAATGGTCCACCCCCATAAAACTACATAAGACAAGCCTCCTGTGTGAAGCCAGAAGCACAAGTGCCTTCAGAGGGCAGTTTATTCCAGTCCAGTTGCCTCCCCAGCTTGTGTGTGGCCCGTCCCCGTAATAGCAGGGACTGTGGAGGGGGTGGGGAAGGTTTTTTCTTTTCTACGTCTGCACAGGTTCAGCTGGAGGCAGCTGATGGGCCTGGGTCCAGACCTAACCATTTGAGATACTCTGATCCGCACAACTGTAGAGACAGGGTTCACTCACTGCTGGTCAGCCTCCTTTGGAAAGTGGAGCGGTCATTGCCTCCAGCACTTCGAAGAAGTGAGCAAAGACACGCCACATTTCCAACGAGTCTGTCTCCCTTATGCAGAGAGCAACGGCTTTTTTAAAAAAAAAATCCTTTCTATCTGTTGAATACAATGGTGCACTTTCGGTGCACATTTTTTAGCAATAGTTGTGAATTAATGGCTAAAAAAAAAAAACTAATTTCCCAGCCCTCAGCTTTGTTTGCACGAAGGGCCCTTGGGCTGAAGGAATAGGTCTCGCTGGGGCATGCTGCCCCATGTGCTGAGTCTTTTGGGGCGGCTGTGCTCCCTTCCCATCTTAGATCTGACCCCCCTGCCCCAGCATGGTTGTGTTTTTTTATTGTTCCAGTCAAACCCGTAATAGTTTCCAGAAGATCTGACAGTCTGCAATGCCAAAAGGGTAAAAATCTGTATTTCACAGTTGTATAGAATAAAGGCTTTAGTTAAAATATTTCAAAGTGTATGGTACACATTTATTTCCACTTGTCATTTTCCTTTATAGCAGATTAGAGAAACTTCTGGTTTTGTGTTTACCCTGGAAATAATTAGCATTGATATCCGTTTTATCCCCCAGTTTAGGGAGGGGGGTGTGTTAACGTGAGGGCAGGAAGAACCAGGTCCCTTGGGTGAGGGTGACCCTGGGTCAGGCCGCCAGGTTAGTGAAGGGAAACTGGCTTCAGAACAGGCCTGGCGTGATTCTACTTCCTGGATTCCTGCAGGCAGACACTGGGCTCCCAGACAACCCAGGAACCAGGTTCTGGCACTGGCTCTGGACACAATGCCTCCCTATTCTGCAGGCTTATCAGCTGCTCTGGTAGACCTGACAAAGCTTTGCTTCTTAAATGCAGTCACAGTGCAGGAAACTTGAGGTGTTTGCTGATATGGGACCCCTCCCTCCATATCTTTGGTCTGGGCCCCTCTATGAGCCTAACGGAGCTCTGAATTCCCTCTAAGGGCACACACCAAATCAAATGGTAAAGGTGGGACTTTTGACTGGGCTGAGGCTAGAAGGCCAGGCCGGAGGCAGCTTTTATGGTAATCATTAGCAAGGGCTGTGGGAAGGTGAGGGACTCTGGCCAGAGAGGACTTCAAGTGATAAGGATCACCCCTGCACGGAGCCCTCCTCTTGCTGTGGGACCTAGGCAGAGCAAGACGCACAACCCAGTCTCAGCCTCCCGAGGCACTGGGGGAGAGGGGAACAGCCCTCTCCCGTACTGTGGGAAATACCAGCGGGCCCTGACTCACTCTTGTCCAGGCGCCTCATCCCTGCGTGGGGTGGGAGCTGTGTGTAAAGTACTCCAGGTGGGAGGACGGGCTCTGAGAGCCTGCTTAGGATGGTGAACTTAAATTTGTTAACTATTATTCACCACTAGGGTGGCTAGATGACTTGTATATTTAAAAGAGATAATTGTAAAAGTTTGGGAGCTGACAGGTTTCCCAGCTGGGGACGCTAGGTCCGTGGGATATAGATGCTGGGGAAGCAGCAGCATCACGGCCCAAGCACAGGTGAGTCTCTGCTGAAGGGCCCAGGATTTCCAACCTTCCCTCAGGAGAAGGGGCCAGGTTCACTGGAGTTTGTGGTCAGCCTGAGCCAACTGTGCACACTAGCACAGGGTGAGACGGCAAATGGGGGCGGCAGGGGTCCCAGGGCTTGGGGGTGCCCTCCATTACAGATAGGCTGGCTGTAATGGAAAAGAATCAAGGCAAGCGCTACGGAACGATTAGACAAACACTCCACAGCAACCCCTTCCTCCCTCACCCCATCTTCACACCTNN EMBV3_42397 TGCAGCGGCAGGAACACCCATCGGCTCACCCAAACCAGAGTAATTGTTATCATCACCTTT Gene BVV0102_078325 + 0 NULL GK000012.2:53407025-54091636 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39757 CTTGGGGATGGTCTTTATCCCTGCCTCCTGTACAATGTCACGAACCTCTGTCCATAGTTC Gene BVV0102_449658 + 1 EMBV3_38017 GK000015.2:83515103-83568479 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00229800 TCONS_00178770 TCONS_00060488 TCONS_00060490 TCONS_00180221 TCONS_00011186 TCONS_00109778 TCONS_00031400 TCONS_00167835 TCONS_00251947 TCONS_00188878 TCONS_00058086 TCONS_00069870 TCONS_00188502 TCONS_00208722 TCONS_00238934 TCONS_00030069 TCONS_00198560 TCONS_00126152 TCONS_00207975 TCONS_00057947 TCONS_00185761 TCONS_00141164 TCONS_00232261 TCONS_00156644 TCONS_00072630 TCONS_00251769 TCONS_00238479 TCONS_00066197 TCONS_00023656 TCONS_00102592 TCONS_00024385 TCONS_00038157 TCONS_00126150 TCONS_00147918 TCONS_00029761 TCONS_00100623 TCONS_00126154 TCONS_00060492 TCONS_00008986 TCONS_00170142 TCONS_00116551 TCONS_00080543 TCONS_00248101 TCONS_00069871 TCONS_00252153 TCONS_00238718 TCONS_00060495 TCONS_00021773 TCONS_00047023 TCONS_00148150 TCONS_00179595 TCONS_00107388 TCONS_00049685 TCONS_00060491 TCONS_00008556 TCONS_00081014 TCONS_00222370 TCONS_00240565 TCONS_00060497 TCONS_00147917 TCONS_00123871 TCONS_00122398 TCONS_00188337 TCONS_00190425 TCONS_00060493 TCONS_00188712 TCONS_00089257 TCONS_00060496 TCONS_00176206 TCONS_00198269 TCONS_00109156 TCONS_00028149 TCONS_00023639 TCONS_00063565 TCONS_00248828 TCONS_00060489 TCONS_00072495 TCONS_00177914 TCONS_00231294 TCONS_00149641 TCONS_00079587 TCONS_00201666 TCONS_00111187 72 XLOC_139294 XLOC_108543 XLOC_036754 XLOC_109990 XLOC_006737 XLOC_065682 XLOC_017648 XLOC_102671 XLOC_154888 XLOC_114919 XLOC_035883 XLOC_042073 XLOC_114545 XLOC_127234 XLOC_145600 XLOC_016324 XLOC_120214 XLOC_077380 XLOC_126489 XLOC_035744 XLOC_111814 XLOC_085592 XLOC_141747 XLOC_095104 XLOC_044398 XLOC_154710 XLOC_145146 XLOC_040914 XLOC_014323 XLOC_061901 XLOC_014494 XLOC_021983 XLOC_089803 XLOC_016019 XLOC_060865 XLOC_004543 XLOC_103517 XLOC_070718 XLOC_049427 XLOC_151488 XLOC_155094 XLOC_145385 XLOC_012446 XLOC_027160 XLOC_090033 XLOC_109367 XLOC_063298 XLOC_029816 XLOC_004113 XLOC_049896 XLOC_135679 XLOC_147229 XLOC_075423 XLOC_073953 XLOC_114380 XLOC_116460 XLOC_114753 XLOC_054042 XLOC_105985 XLOC_119926 XLOC_065061 XLOC_015421 XLOC_014306 XLOC_038292 XLOC_151771 XLOC_044263 XLOC_107687 XLOC_140783 XLOC_091515 XLOC_048472 XLOC_123311 XLOC_067087 Coding TCONS_00122398 XLOC_073953 Coding Coding - 21:7014236-7017701 - TSS91157 3465 2 TCONS_00122398_6 162 0.999134199134199 1 0 0.000585063789679719 0.00133028532566571 0.000609788916453181 0.000624308497602406 0.00073401160528929 0.000200252401671131 0.000626425269143257 0.000349032436503999 0.00159392940138531 7.83712933799993e-05 3.93092567665752e-05 1.24693152206138e-06 0.000143947124633393 0.000278438333232553 0.000169534072105345 4.57343504794127e-05 0 0 0.000637588180278657 0.000974569220305688 0.000302463247050511 5.35402974725164e-06 0 4.83829113148253e-06 0.000540658716267424 0.000418807931195365 0.00054565641174357 1.38603259552188e-05 4.20312405404202e-06 2.31351667898023e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1353 84.88 0.333621933621934 NR_047679.1 UGDH-AS1 Homo sapiens UGDH antisense RNA 1 (UGDH-AS1), non-coding RNA. 3e-58 232 68.22 0.192784992784993 TCONS_00122398_6 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-06 47.8 22.86 0.777777777777778 1 coding 0 0 0 0 -0.771351067419945 0.0405011737901622 0.0376261617141226 0.472326582819497 NNATTTTTTCATTTGTAATTTTTTTGATTTGGGTCCTTTCTTTTTTCCTTGGTTAGTCTAGCCAAAGATTTGTCTAATTTTGTTTATCTTTTCGAAGATCCAGTTTTTAGTTTCTTATCTTTTTAGTCTCTATTTCATTTTATCTCCTCTAATCTTTCTTTCCTTTCTTCAACTAACTTTGAACTTAATTTATTCTTCTTTCTGTAGTTCTTTGAGGTGTAAAGTTAGGTGGTTTATTTGAATTATTTCTTAATGTAGGTGTCTATTGCTGTGTGTTTTCCTCTTAGATCTGCTTTCTCTGCAACACATACATTTTGATACGTTGTGTTTTCATTTTGGTTTGTGTCAAGAAACTTATCTGTCTCTCTTTAAAAAGATCATATACCATGATCAAGTCAGATTTGTTCCAGGAATGCAATAATTCTTCCATATATGCAAATCAATCAATGTGATACACCATGTTAACAAATTTAAAGCTAACCATATGATAATCTCAATAGATGCAGAAAAAGCTTTTGACACAATTCAACCCCATTTATGATTAAAAAAAACTCCTTAAAAAATGGGTACAGAAGGAACCTACCTTAACATAATAAAGGTCATATACAACAAACACAGCAAACCTTATTCTAAATAGTGAAAACCTGAAAGCATTCCCTCTGAAATCAGGAACAAGACAAGGGTGCCCACTCTCACCATTATTACTCAACATAATTTTGGGAATCCTAACTATGGCAGTCTGAGAAGAAAAAGAATAAATGGAATCCAGATTGGAAAGAAAGAAGTAAAACTCTCACTATTTGCAGATGACAGATTCAAATAGATGACTGTTTACAGATACTGTACATAGAAAACCCTAAAGATACTGTCAGAAAATTATAGAGCTAATCGGTGAATTTAGTAGCATTGCAGGATACAAAATCAATACACAGAAATCACTTGCATTCCTATACACTAAAAATGAAAAATCAGAGAAATTAAGGAATCAATCCTACTTACTATTGCAACAAAAAGAATAGAATATCTAGGAATAAACTTATCTAAGGAGACATGTAAAGATGCTGTAAAGAACAATATCGCATAGGAACCTGGAATGTTAGGTCCATCAATCAAGGTAAATTGGAAGTGGTCAAACAGGAGATGGCAAACGTGAAAATGGACATTTTAGGAATCAGTGAATTAAAATGGACTGGAATGGGCAAATTAACTCAGTTGACCATTATATCTACTACTGTGGGCAAGAATCCCTTTGAAGAAATGGGGTAGCCCTCATAGTCAAAAAGAGTCTGAAATGCAGTTCTTGTTTGCAATCTCAAAAACGACAGGATGATCTCTGTTCATTTCCAAGGCAAACCATTCAATATCATAGTAATCCAAGTCTATGCCCAAGCAGTAATGCTGAAGAGCAAGTTGAACAGTTTTATGAAGACATGCAAAACCTAGGACTAACACCCTAAAACGATGTCCTTTTCATCATAGGGGACTGGAATGCAAAAGTAGGAAGTCAAGAGATACTGGAGTAACAGGCAAATTTGGCCTTGGAATACAAAATGAAGCAGGGCAAAGAGTTTTGCCAAGCAAATGCACTGGTCATAGTAAACACCCTCTTCCAACAACACCAGAGACGACTCTACACATGGACATCACCAGATGGTCAATACTGAAATCAGATTGATTATATTCTTCACAGCCAAAGATGGAGAAGCTCTGTACAGTCAGCAAAAACAAGACCAGGAGCTGACTGTGTCTCAGATCATGAACTCCTTATTGCCAAATTCAGACTTAAATTGAAGAAGTAGGGAAAACCACTAGTCCATTCAGGTATGACCTATATCAATCCCTTATGGTTATACAGTGGAAGTGACAAATAGATAAGGGATTAGATCTGATAGACAGAGCACCTGAAGAACTATGGACAGAGGTTCGTGACATTGTACAGGAGGCAGGGATCAAGACCATCCTCAAGAAGAAGAACTGCAAAAAGGCAAAATGGTTATCTGAGGAGGCCTTACAAATAGCTGAGAAAAGAAGAGAAGTGAAAGGCAAAGGAGAAAAGGAAAGATATACCCATTTGAATGAAGAGTTCCAAAGAATAGCAAGGAGAAATCAGAAAGCCTTCCTCAGTGATCAATGCAAGGAAATGGAAACAATAGAATGGGAAAGACTAGAGATCTTTTCAAGAAAATTAGAGATACCAAGGGAATATTTCATGCAAAGATGGGCACAATAAAGGACAGAAATGGTATGGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACAAAGAAGAACTATACAAAAAAGATCTTCATGACCCAGATAATCACGATGGTGTGATCAGTCACCTAGAGCCAGACACCCTGGAGTCTGAAGTCAAGTGGACCTTAGGAAGCACCACCACAAACAAAGCTAGTGGAGGTGATGGAATTCCAGTTGAGCTATTTCAAACCCTAAAAGATGATGCTGTTAAAGTGCTGCACTCAATATGCCAGCATATCTGGAAAACTCAGCAGTGGCCACAGGACCAGAAAAGGTCAGTTTTCATTCCAATCCCAAAGAAGGTTCAAACTACCACACAGTTGCACTCATCTCATATGCTAGCAAAGTAATGCGCAAAATTCTCCAAGTCAGTCTTCAACAGTATGTAAACTGTGAACTTCCAGATGTTCAAGCTGGATTTAGAATAGGCAGAGAAACCAGAAATAAAATTGCCAACATCTGTTGGGTCATTGAAACAGCAAGAGCATTCCAGAAAAATACCTGTTTCTGCTTTATTAACTACGCCAAAGCCTTTGACTGTGTAGATCACAACAAACTGGAAAATTCTGTAAGAGATGGTAACCAGATCACCTGACCTGCCTCCTGAGAAACCTATATGCGGGTTAGGAAGCAACAGTTAGAACTGGGCATAGAACAACAGACTGGTTCCAAATCGGGAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATGCAAAATGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAACCTCAGATACACAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAGAGTCTCGAGGATAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAACTCAACATTCAGAAAACTAAGATGGCATCTTGTCCCATCACTTCATGGCAAATAGATGGGGAAACAATGTAAACAGTGACAGACTTTATTTGGGGGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGTCTGCTCTTTGGAAGAAAAGCTATGACCAACCTAGACAGCATGTTAAAAAACAGAGACGTTACTTTGCTGACCAAAGTCCATCTAGTCAAAGCTATGGTTTTACCAGTAGTCATGTATGAATGTGAGAGTTGGACTATAAAGAAAGCTGAGCACCAAAGAAT TCONS_00120438 . 5' 2125 TCONS_00120438 . 5' 2125 EMBV3_11398 CTCAGGGCCTGTCACAGTCTACCCATACACGCATGCCCTGGACACTCTGTTTGTGCCCTT Gene GeneID:519266|IGSF8:NM_001082439:284_cdna Constitutive 0 NULL GeneID:519266 3 GENE IGSF8 MGC151661 immunoglobulin superfamily, member 8 EMBV3_35082 TACAGAGTTTTAATGCAGGGTGACATCCCACAGGGGAGAAGAATGTCTGCAGTGGGTGAC Gene GeneID:538564|COL8A1:NM_001101176:4_cdna UTR3_Alt 1 NULL GeneID:538564 1 GENE COL8A1 NULL collagen, type VIII, alpha 1 EMBV3_15453 ACAAGCTAGTCTCGCTCATCTACATCAACCTCACCCCCCTGCTCTACCCGGCCATCTACA Gene GeneID:618554|LOC618554:XM_002698157:607_cdna Constitutive 0 NULL GeneID:618554 25 GENE LOC618554 NULL similar to olfactory receptor 1326 EMBV3_15425 TCCTCGTACAGCTGCCCAGAGTAGCAAAGTGGAAGTCATCGTTCAGGAGAGGAAAGATAC Gene GeneID:512697|C22H3ORF19:NM_001075578:19_cdna Constitutive 0 NULL GeneID:512697 22 GENE C22H3ORF19 MGC139858 chromosome 3 open reading frame 19 ortholog EMBV3_38806 TGTGTGGAGAGAGCGGCTTAGTTGCGGCGCTTGAGCAAGTTTTCCACCATGGCTTCAAAT Gene GeneID:516544|DENND5B:XM_002687699:92_cdna Constitutive 0 NULL GeneID:516544 5 GENE DENND5B NULL DENN/MADD domain containing 5B EMBV3_09807 ACTTCAGCTACCAAGAACAGAAGACGATGTCAAACCCCACACCAAGTGTCATGTGGCAGG Gene GeneID:407178|gzmA:NM_001001142:61_cdna Constitutive 0 NULL GeneID:407178 20 GENE gzmA NULL granzyme A EMBV3_41711 CTGGCCACAATGGTGAAATATTATGTGCAGAAGGCCAGTGAGCTGGAGTATGAAACTGAG Gene GeneID:784945|LOC784945:XM_002693096:468_cdna Constitutive 0 NULL GeneID:784945 15 GENE LOC784945 NULL similar to Calcitonin gene-related peptide 2 precursor (Calcitonin gene-related peptide II) (CGRP-II) (Beta-type CGRP) EMBV3_18523 GGGAAGGATTTAGGGATTCCTGCTGCTGAGTGGCATTCTCTGTGTTTAAATCTTGGCCCC Gene BVV0102_423877 + 0 NULL GK000007.2:19308139-19329863 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00215879 1 XLOC_131107 Coding TCONS_00215879 XLOC_131107 Coding Coding CLPP 7:19300248-19309293 j TSS161139 3771 1 TCONS_00215879_3 189 0.662954123574649 6 0.583701901813357 1.12835798401544e-25 0.000143977050086797 2.47778862815368e-05 2.31356636201253e-17 3.25982482830323e-09 6.10638710110202e-09 1.80244226503052e-10 1.30750707758799e-05 0.000134783948319888 1.30645702667751e-05 4.5718611214168e-09 5.94132620169527e-10 1.00221756704922e-25 1.74980058928834e-10 3.55734372837992e-05 1.98899315593232e-10 0.000130447271053378 6.76833561875904e-05 4.75015779115987e-11 8.85046485021862e-14 1.89539893609452e-11 6.64805319700243e-18 1.6329298906593e-10 5.29646343739647e-18 4.46517905486265e-12 1.311577478125e-20 6.0627148051098e-15 8.36090841020363e-14 2.19245069703562e-27 4.40340733663808e-10 NM_001046414.2 CLPP Bos taurus ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) (CLPP), mRNA. 0.0 1452 100.00 0.213206046141607 NM_006012.2 CLPP Homo sapiens caseinolytic mitochondrial matrix peptidase proteolytic subunit (CLPP), mRNA. 0.0 933 84.96 0.213471227791037 TCONS_00215879_3 sp|Q2KHU4|CLPP_BOVIN CLPP_BOVIN Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial; 1e-136 388 100.00 0.994708994708995 1 coding 0 0 0 0 -0.112076722582875 0.444222047216512 0.00384305919380018 0.947603769153652 CAACGTTGGTTCTCCCTTGAGCTGGCCCACTAACAGTGTCTCCCACTCTGATAAACTTTATTCTCCTCTCATTCTGCTTCATGTCCAAAAAGTCTTTTCCAACCCGCGCATGGACCATGACAGTGGGGCCAAGATTTAAACACAGAGAATGCCACTCAGCAGCAGGAATCCCTAAATCCTTCCCTGTAAAACCGGTTTGATCATCACTATCTTCCAAACAAGAAACTTCAGGCTCAGAGGAGTTAAGCAATGCACCCGAAGATCACACAGCATGTCAGTGGTTAAACCAGGCTTGGCATACGGGGTCGCGGTGAGCGCGCCTATGACATCTACTCGCGGCTGCTTCGGGAGCGTATTGTGTGCGTCATGGGCCCTATCGATGACAGTGTCGCCAGCCTGGTCATCGCGCAGCTGCTGTTCCTGCAGTCGGAAAGCAACAAGAAGCCCATCCACATGTATATCAACAGCCCCGGTGGCGTGGTGACCTCGGGCCTGGCCATCTACGACACGATGCAATACATCCTGAACCCCATCTGCACGTGGTGTGTGGGCCAGGCAGCCAGCATGGGCTCCCTGCTTCTGGCTGCTGGCACCCCAGGCATGCGCCACTCACTCCCCAACTCCCGCATCATGATCCACCAGCCCTCTGGGGGTGCCCGGGGCCAAGCCACAGACATCGCCATCCAGGCAGAGGAGATCATGAAGCTCAAGAAGCAGCTCTACAGCATCTACGCCAAGCACACCAAACAGAGCCTGCAGGTGATCGAGTCAGCCATGGAGAGGGACCGCTACATGAGCCCCATGGAGGCCCAGGAGTTCGGCATCTTGGACAAGGTTCTGGTCCACCCCCCACAGGATGGGGAGGATGAGCCGGAGCTGGTACAGAAGGAGCCGGGGGAGCCAACAGCAGTAGAACCCGCCCCAGCCAGCGCCTGAGAACTGGCCTCCCTCTTGCCCTCCCAGGGAGAGTGGAGGCGCCTGGCCTGTGAGCCCCTCCACACTGAGCCTGGAGGGGCCCCTTGAGGAACTGTGGATTTGGGGGTGCCCCTCTGGGTGGGCAGCCCAACTGAGACACTGTGATTTTAAATTAAATCTTTGTAGCCTTTGCTCCCGGCTCCGGCACCTTCCCTCTGGCATCTACCCTGGCTCACGTGTGCCTTCACCCTGACCTTCATCTTGAGCAGAGCTAAGAGCCTACATGACACTCCAGAGGCCACAACTTATTGTGAAGAAGACACAGAAGTCTCCGTCCTGAAGAAACTTACATTCTTGGGAAAGTAGACGGTTTTTTTTTTTTTTTTTAAATCAGGGCAAGAGATATGCAGTGTCGGGTGTGTGTGACAAGAATTAGATGAAATGACCCACAGAGGCCTTGCTGAGAAGGTAACATTAGAGCAAAGACCTGAAGGAGGTGACGGTCAGGGGAGCCAGATTGCTATCTTGGGACACAGCAGTCCTGGCAGAAGGCATGGCAAGTGCAAAGGTCTTGTGGCAGGACTATACCTGGCACATGAGGGGAACCATGAGGGAGCTGGGGTGGCTGGAGGGAGGGAGTGAGTGAGGGGAAGAGTAGAGATAAGAGCAGGAAGAGGAGTATAGATCGTAAAAGGTCTGGTAGGGCTTCGCAGATGGCTCAGTGGTAAATAATCCACCTGCCAAGATTCAGTCCCTGGGTTGGGAAGATCCCCTGGAGGAGGAAATGGCAATACACACCAGTATCCTTGCCTGGACAATCCCATGGACAGAGGAGCCTGGCAGCCTACAGTCCATGGGGTCGCAAAAAGTCAGACACGACTTAGTGATTAAACAGCAGCAGGTCTGAGATAGGAGGGAGGTGCCCCATGGAAGGTTTCAAGAAAAGGAACAGGGGACTTCCCTGGTGGTCCAGTAGCTAAGACTCTGCACTCCCAGTGCAGGGGGTCTGGGTTCAATCCCTGGTCAGGGAACTAAGATCCCACATAGTGCAACTAAGCCCGAGTGCTGAAACTCCTGAGCCTGCACCACAACAAAGACCCAGGACAGCCAAAAAAGAAACAGGAGCCACAGAGTGGTGGGTGGAGGGCGGCAAGCACAGGAATCTGGAGTGAGGAGACTTGGAACCACCCAGAGGAAGGGTGACCTGGCCCCAGCCACATGGTGAGAGAGGCTGGTTTCCAGCCAGGTTTTAAAGGCAGGGCTTACAGGTAGGATGTGAGATTTGAGAGAGAACGAAATCTCCCCAAACTCCTAGGTGTTGGCCCAAAGCAGCCAGAAAGATAAGATGTTTCCAGGAGAGCTGGGGAGAGGAGCAGGGGTCGGGATCAAGAGTTGATTTTGGATGTCTGAAGTCTAGCGTGCCTCTCCCCTTCCGCCCCCACCCCCCACCCAGGGTTGGAATTAAAATGTAGGAGACTTCAGTGTGTCCATGAGTTAGCAGTCAGGCTGAGAACTGGTTATGGCACTTGGCCCTGCAGAAATCACTAGTGGCCTTCAGTAAGACCACTTTTAGTGCTAGGGGGCCAAAAGCCAGGTTGGAGTGGACCCAGAGAGAAGGGGCTGGAAAATACTGGGAGCTAGACAAGTTTTTCAAGGAATTTTGCTGTCAGAGCAAAGAACAATTTTTGTTGTTGTTTTTTTTTAATACAGACTTTTTAATTTGGCTTCATTCATCAATTACATTTGGTTGAACTTTTTCATTCTGCGCAATTTAAAATATATACAAAAGTGGAGAAGACCCTCGTGGTCCATTGGTTAATAATGGCCTGCCAATGCAGGGGACACAGGTTTAATCCCTGGTCCGGGAAGATTCCACATGCTTCAGAGTAAGTAAGCCTGTGCGCCACAACTACTGAAGCCCACATGCCCTAGAACCCGTGCTCCACAAGAGACACCATCCCAGTGAGAAGCCTGGGCACCAAAGCTAGAGAGTGGCCCCTGCTCTCCACAACTAGAGAAAAGCCCACACAGCAATGAAGGCCCGGTGCTGCCAAAACAAAAAACACCTGTAGTAATTTTGTTTAGGAAAAAAAGTAGAGAAACTAGAATAATGAGGTCTCGTGTACCCACCACACCAATTCATGGCTGATTATGACTCGTCCCTCGCCTGCCTCTACAGAGCCTCTACCATGCCTTTGTAGTACTTTGAAGCAAATCCCAGCTTTTCATTTCATCTGTAATATTTCAGTATGTATTTCTAAAATGATAAGTAATTTTATTTCTCAAAAATACTAAGAATAACCACATGACCCAGCAATTCTATTCCTTTTGGTATATAGCCTTAAAAAAAAAAAAAAAAAAAAAAAACTATTTAGAAAAGATAACATGCATGCCAATACTCATGGCATTATCTACAACTGCCAAGATATAGAAGCAATCTAAGTGTCCATCAACAGATGAATGGATGAAGAAGATACAGTACATATACACAATGGAATATTACTCAGCCATAAAAAAGAATGAAATAATGCCATTTGCAGCAACATGTATATGGACTTGGAGGGTATTATGCTAAGTGCGTTAAGTCAGACAGACATTCTGTATCATATCACTATTACGTAGAATCTAAAAAATAAGCTAGTCAATAAAACAAACAAAAAAAACAGACTCACAGACACAGAACAAACCAGTGGTTACCAGTGGGGAGAGGGAAGGAGGAGGGGCAATATAACTAGGGGATTTTTTTAAAAAAAGATTATCAGGAGAGTCTATGAAATCATGCATGTGAAACTTTTAAAAACTGTAAAGTGCTACAGAATTTAAAGAACTTACAAAAAAGGTTAATAAAGGACAAGG EMBV3_29330 CAATTTGGGTGTTTGAGGGAATGTGCATCCGTGGGCTTGTGGGAAAGTGGCCAAGAGATG Gene BVV0102_379698 + 1 EMBV3_32713 GK000007.2:70839762-70858270 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25034 AGAGCTGCGCTGTAGTTCCACCTTAGAGTATTCAGCAGGTAGACTTGACCCTTTCCCAGG Gene BVT0102_027615 + 0 NULL GK000029.2:13004914-13455662 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00163145 TCONS_00163167 TCONS_00163152 TCONS_00163142 TCONS_00163171 TCONS_00163144 TCONS_00163165 TCONS_00163154 TCONS_00163150 TCONS_00163170 TCONS_00163151 TCONS_00163163 TCONS_00163166 1 XLOC_099813 Coding TCONS_00163165 XLOC_099813 NonCoding Coding - 29:13186898-13256711 - TSS122330 349 1 TCONS_00163165_2 77 0.203438395415473 4 0.995058156190913 0.00158610190560955 1.0935183136498e-163 0.000492664252726629 0.000911549390498703 1.84404038753879e-29 1.76237694625528e-89 0.000100739941922709 7.93753229501784e-21 8.55248653008848e-15 0 3.03894859414298e-139 0 2.46689880241627e-24 4.88767309964925e-66 3.23640084039985e-06 0 0 0 0.000108494459133982 0.00249076687221663 2.07163145767961e-33 0 0 0 0.00135492266502444 0.00249090771638349 0.0034967232743281 0 0 0 0 noncoding 0 0 1 0 -0.172710502335961 0.211273082921333 0.0208328847563752 0.691645839639531 TTTCCTTGGCATTTTCCTAGTGGATTTGCTCATGGATGGATGCCTCCCTCCAGCAGTCTGGATGGGATGCCAGCAGGGTCCAGCTTCACAAAGGTTTCAGCTTATGCAGACCACATCTCCTTAATCAAGGAAGCCTTCTCTGACTCCCTGGGAAAGGGTCAAGTCTACCTGCTGAATACTCTAAGGTGGAACTACAGCGCAGCTCTGTGGTGTCAAGTTTGCCCACAGATGAGGGCCTGCTTTCTGCAAGTGATCTCTGCTGGTCATTCCTAGAACTCTCCCGCGCCGTGACCTTCAGGAAGGCACACAGGTATCCGCTGCAGAGTTGGGGCTCCTCAAAGGAGATGGA TCONS_00163141 s 3' 181986 TCONS_00163141 s 3' 181986 EMBV3_31553 CCACCAAGGCCTACGAGATGGCCCTCAAGAAGTACCACGGCTGGATTGTGCAGAAGATCT Gene GeneID:327678|GLTP:NM_175799:30_cdna Constitutive 0 NULL GeneID:327678 17 GENE GLTP MGC152464 glycolipid transfer protein EMBV3_03553 AAATAAAACTCAACTGGGAGAAGATCCACAATAAGGAGTCACGACCCTGGGACTTCCCCG Gene BVV0102_049233 + 0 NULL GK000019.2:12696416-12751837 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32438 CTGCCAGCTATACGGGAAGAGGTAGGAGATGACAAGACCGCCATCAAATGTGAAACCTTG Gene GeneID:100299144|LOC100299144:XM_002692511:3_cdna Constitutive 0 NULL GeneID:100299144 14 GENE LOC100299144 NULL similar to PTPRF interacting protein alpha 1 EMBV3_40968 GGCAGAAAACCATTTCATGGCAGAACCAGATTAGAATCCAAGCCTCTAATCCTTGGAGGG Gene BVV0102_088426 - 0 NULL GK000003.2:95402148-95558175 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13041 CTGGAGAAAAACTTTACACGTGTGGAGAATGTGGGAAAGCCTTTGGTTGCAAATCTAACC Gene GeneID:523334|ZNF354C:XM_002688501:117_cdna Constitutive 0 NULL GeneID:523334 7 GENE ZNF354C NULL zinc finger protein 354C EMBV3_26435 GTGGTGCTGCCTTTCTGTTTAACATAATCTTTGGTGGCATCTAAACAAGAGACCCTCTTC Gene BVT0102_165618 + 0 NULL GK000006.2:73537573-73540782 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00203585 TCONS_00203589 TCONS_00203581 TCONS_00203587 1 XLOC_124206 Coding TCONS_00203589 XLOC_124206 Coding Coding SRP72 6:73511904-73538837 j TSS152459 3705 1 TCONS_00203589_6 476 18 0.863099658398931 0.00147789864352802 0.000589654114223854 0.000732084638182514 0.000394306744221637 0.000250530972347162 3.53820379889415e-10 2.28051361197521e-06 0.000923369988480617 0.000393439005330079 7.0887403698227e-05 2.4063154219842e-05 0.000175739787629665 3.34127991976595e-07 3.8918234851084e-86 0.000282457873202045 0.00681613530577758 0.00505067650690847 0.0041286546720312 3.35391460212e-10 0.00091534524874529 0.000348298451659132 9.38556629303273e-08 0.000721562971674628 0.00510466128885827 0.00141216702632628 0.000677226207735333 0.00048085640633624 0.000309181916061634 2.83186893705824e-07 0.000110214491777531 XM_005207951.1 SRP72 PREDICTED: Bos taurus signal recognition particle 72kDa (SRP72), 0.0 6240 100.00 0.933603238866397 NM_006947.3 SRP72 Homo sapiens signal recognition particle 72kDa (SRP72), transcript 0.0 3476 84.79 0.842375168690958 TCONS_00203589_6 sp|O76094|SRP72_HUMAN SRP72_HUMAN Signal recognition particle 72 kDa protein; 0.0 868 96.74 0.964285714285714 10 coding 0 0 1 0 -0.550197447079707 0.140342162753069 -0.0538236725382397 0.294097280031749 CTCCTCTCCTCCAAGATGGCGAGCGGCGGCAGTGGGGGGGTTTCGGTGCCTGCGCTTTGGAGTGAAGTGAACCGTTATGGCCAGAACGGTGACTTCACGCGCGCTCTCAAAACCGTCAACAAGATACTGCAGATCAACAAAGATGACGTTACTGCCCTGCACTGTAAAGTGGTGTGCCTTATCCAGAACGGAAGTTTCAAGGAAGCCTTGAATGTCATCAACACTCACACCAAAGTGTTTGCCAATTATACCGGTTAGAACGCTATGATGAATGCCTGGCTGTATATAGAGATCTTGTCCGAAACTCCCAAGATGATTATGATGAGGAGAGAAAAACAAATCTTTCAGCAGTTGTTGCAGCTCAAAGCAACTGGGAAAAAGTGGTTCCAGAGAACTTGGGTCTCCAAGAAGGCACGCATGAGCTGTGCTACAATACTGCGTGTGCTCTCATAGGACAAGGCCAGCTGAGCCAGGCGATGAGAATTCTGCAAAAAGCTGAAGATCTCTGCCGCCGTTCATTTTCAGAAGACTCTGATGGGACTGAAGAAGACCCCCAGGCAGAACTGGCCATCATTCATGGGCAGATGGCCTATATTCTGCAGCTTCAGGGTCGTACAGAGGAGGCTTTGCAACTTTACAACCAGATAATAAAATTAAAACCAACAGATGTGGCATTGCTAGCTGTGATTGCAAATAACATCATTACAATTAACAAGGACCAAAATGTCTTTGACTCCAAGAAGAAAGTGAAATTAACCAATGCAGAAGGAGTGGAGTTTAAGCTTTCTAAGAAACAACTGCAAGCTATAGAATTTAACAAAGCTTTACTTGCTATGTACACAAATCAGGCAGAACAGTGTCGCAAAATATCTGCCAGTTTACAGTCGCAAAGTCCTGAGCGTCTCCTTCCTGTGTTGATCCAAGCTGCCCAGCTCTGCCGTGAAAAGCAGCATACAAAAGCAATAGAGCTGCTTCAGGACTATTCAGATCAGCATCCAGAAAACGCTGCTGAAATTAAGCTGACCATGGCACAGCTGAAAATTTCCCAAGGTAATATTTCCAAAGCATGTTTGATATTGAGAAGCATAGACGAATTAAAGCATAAACCAGGCATGGTGTCTGCATTAGTGACGATGTACAGCCATGAGGAAGATATTGACAGTGCCATTGAAGTCTTTACACAAGCCATCCAGTGGTATCAAAACCATCAGCCCAAATCTACTGCTCATTTGTCCTTGATAAGGGAAGCTGCAAACTTCAAACTCAAATATGGGCGGAAGAAGGAGGCAATTAGTGACCTAGAACAGCTATGGAAACAAAATCCGAAAGATATTCACACCCTGGCGCAGCTTATTTCTGCTTACTCACTTGTAGATCCTGAGAAGGCAAAAGCTCTTAGTAAACACTTGCCCTCATCGGATAGTATGTCTCTAAAAGTAGATGTTGAGGCTCTTGAAAATTCTCCTGGTGCTACATACGTTCGGAAGAAGGGTGGAAAAGTTACTGGAGACAATCAACCAAAGGAGCAAGGACAGGGAGATTTGAAAAAAAAGAAGAAAAAAAAGAAGGGAAAACTGCCTAAGAATTATGACCCAAAAGTGACCCCAGATCCAGAAAGATGGTTACCAATGCGTGAACGTTCCTACTACCGAGGAAGAAAGAAGGGTAAAAAGAAGGATCAGATTGGGAAAGGGACCCAGGGAGCAACTGCAGGAGCTTCCTCTGAACTGGATGCCAGTAAAACTGTGAGCAGCCCACCCACCTCGCCAAGACCTGGCAGTGCAGCCACAGCATCTACATCTACAAGTAATATCATACCCCCACGACACCAGAAACCCGCTGGGGCTCCAGCAACAAAAAAGAAACAGCAACAGAAAAAGAAGAAAGGTGGAAAAGGTGGCTGGTGATTAGAACATTTGTGTTTCAGGCCATTTTTAAACTAGCCTCAGTGACACAAGGAACATAAATAAAGGTAACACAGCAAGAAGCACAGAGCTGCTCCCTCTCCCCTCCCTACATCTTCATGAAATTATTTTGTTGTGCATCAAACAGAAAAGCATCTTCCTTCAAACTCTGCCTAGTCAGACTTGGCCTACTTGTACCACCTTGCTTCACACAGGTGAGGAGGACGCAGAACAGTTGGGCGTTTACCCAGCTTGATATCCATTGCATCCTTTCTCTTTGTGTGCTGATCTGGTGGTATTTTCAGTTTCAGAAACAAGGCATGTTATCCAACGTTTCCTAGGATATAAACAAAAACTACTTCTGTTTCAACTAGAGTCCAAAGATACTTGTTCCTTCAAGTCCCATTTTATGTCTTAGGAAGCCTTAGGAGACTGAAAGTGGAGTCTTCTGAGCATTCCAAATATCTGCTTAGAAATAGCATGTAATAAAAGGGACCTTATTAATACACTGGTGTTTTCACTTCACTACATGAGTGGCCACAAGAAAACTAAATTAAATGTCTTGATTATTCATGAAATTCTGTCATGTGATACTGGAATATGGGCTACTAAATATATGTGGTAATGAAAAGTATGTGTATGTATATACATATATACACACAGATATAAAGTAGGACTTCTTTGTGCCCCCATGTCATTTTCAAATTATAACATTATGCTAATTTAGCACTATCGAAGATAGCAAGAGAATATGTTGCAAGAAGTTGACACTTAGACGCAGTGTTCTGAGGTCAGATGGATTTGGACCCTCTTGGTCAGAAAGATTTAAATGGCCCTTATCGAGCATGAACATTGACTTCCGACAGAGAGAGGCAATCAATGCCAGAGTTGAGGAGTCGGCAGTATTAAAGCTTAAAAGAACTGTTTGGCCCAATTAATAGATCTCAAATGACTCCTCTTTCTAGTTGCGGGGCATGACCATTCATTACCCTTCTCAAAGTAATGGAAGTCAGTCCATGATATCAGTGTCACTTTGTTCTTGCCTTGCTTACAGGTCACTTTCTTGAACAGGTGTGAGGCAGACACACTGGCATGCCTACCCAAGTTAGTGTTCATTTTATGCTGCCCAGGATAGCATTCGGTTTAGACTTACACGTATTTCTTGTGATCGTATTGCTCTGTCCTTGTTAATGAAATGCTGCTGTGTTTAAACATACCTGCTAAAACTTCACAGGGTTTTTTGAAAGTTTTTCCTCCTTTACCAGAGTAAGAAATGTGGTGCTGCCTTTCTGTTTAACATAATCTTTGGTGGCATCTAAACAAGAGACCCTCTTCTATGAATGATTTATTATGGCATTATACTTTTTGAGCTCTCAGAATAGTCTTTTGGTAAGAGTGACAGATATTTATTCCTTCTGAATATAAAGCCCACTACAAAAATAACTGTTAGTAAATTTATGATTTTAGGATTCTGTTAAATTTCTATAGTGAAGGATAATCAATTCTTAGGTTACAGAATTTTGGTGAAATTTATCTATCAATGAAAATTTTGACCCAAGGCACAAGAGAAATTTCCAGTTCTCTATTTAGTCATTGTAATTGCTAGTTGTTTTTATCATCAATCAGTACTAAGCAACTGAAACCTCAGTTCAAATAAATTGTCATTGTCAAATGAAGTGTAAACACCTATGTTAACTTCCTAGTAATTATTTCTTCTTTTGGACAGGTTTTTAACTCATGACATATATACTTTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTACATTTATAAAAAACCAA EMBV3_40321 ATCCGCTTAGGGCTTTTGAGGCTGTGGGGAGCCTGAGGGGACCAGGACTCAAAGAATTGT Gene GeneID:785988|LOC785988:NM_001105465:425_cdna Constitutive 0 NULL GeneID:785988 25 GENE LOC785988 NULL hypothetical protein LOC785988 EMBV3_30858 CTGTACTTGTAAAAGTTGAGAGCAGTGTTTCTCCAGTCTGAGAACCTAAGGACCTCTGAG Gene BVV0102_378667 + 0 NULL GK000020.2:18194510-18200870 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03600 GCCAGACCCCAGTGTTCTCCAAAGCTAGATTTTGGCTTTGGGATCCAAGAACACATCGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30486 GGAGGCAAGCAGCAAAGATCAAGAAGTTGGTGAAAAGAAGCGGAAGGGGGAAGAAAGCAC Gene GeneID:522810|TEX14:XM_002695581:111_cdna Constitutive 0 NULL GeneID:522810 19 GENE TEX14 NULL testis expressed 14 EMBV3_10580 AGGCCTCCTGGGTTGCCTCCCCTGCTGCTTGGGACGTGTACAGCACAGAATGGGTATTTA Gene GeneID:535982|TBX2:XM_002695607:8_cdna Constitutive 2 NULL GeneID:535982 19 GENE TBX2 NULL T-box 2 EMBV3_27465 TCCCTTCTGGCAGGGCTCCCTCGAAACGCTGGAGAACACAAAACCAAGGAGAACACAAAA Gene BVV0102_392197 + 0 NULL GK000019.2:42645797-42660524 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097020 TCONS_00097018 TCONS_00097019 TCONS_00097021 1 XLOC_058154 Coding TCONS_00097019 XLOC_058154 Coding Coding NT5C3L 19:42657593-42665729 j TSS71995 1108 3 TCONS_00097019_4 129 7 0.864658881376767 8.61893387408791e-11 0.000133211905559143 5.93599865567446e-28 0.000228198110430326 1.32340444771624e-09 3.26634000594362e-10 0.000113093781333366 0.000115590181001665 0.000166006645708191 0.000128331619243897 0.000448673897015642 0.00011390629454833 0.000181440384347317 8.62122500797086e-05 2.45761323972437e-05 0.00233877215279016 0.00611934781210669 0.0057455928911438 1.44144937564567e-12 6.84095706245423e-08 0.000243655220825922 0.000252156407896632 4.6292296787514e-08 0.00131074022276388 0.000183925828821432 8.75115393207905e-09 0.000127192410802524 0.00140728344695382 0.000759003908689533 8.78575219514237e-14 XM_005220716.1 NT5C3L PREDICTED: Bos taurus 5'-nucleotidase, cytosolic III-like (NT5C3L), 0.0 1328 100.00 0.663357400722022 NM_052935.4 NT5C3B Homo sapiens 5'-nucleotidase, cytosolic IIIB (NT5C3B), transcript 1e-139 500 90.11 0.335740072202166 TCONS_00097019_2 sp|Q969T7|5NT3B_HUMAN 5NT3L_HUMAN Cytosolic 5'-nucleotidase III-like protein; 2e-69 214 95.24 0.97196261682243 1 coding 0 0 0 0 -0.241118437333183 0.177382609987882 0.0166049692683486 0.754490234330985 GCAGTGCAGGCGCGGGGGCGGTCGTTGTGTCCACGCCGCCGACCGGCCCGCGAGCGCAATGGCGGAGGAGGTGAGCACCCTGATGAAGGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCAGGAGATCGTGGGCGCCCTCCGCAAGGGCGGGGAAGACCGCTTACAGGTCATTTCTGATTTTGACATGACCTTGAGCAGGTTTGCATATAATGGAATACGATGCCCTTCTTCTTACAACATTCTGGATAACAGCAAGATCATCAGTGAGGAGTGCCGGAAAGAGCTCAAAGCGCTTTTTCACCATTATTACCCAATTGAGATTGACCCACACCGGACCATCAAAGAGAAGTTACCTCACATGGTAGAATGGGCTTCCTAAACGGATTCAAGGGCCAGCTCATCCATACCTACAACAAGAACAGCTCTGTGTTCGAGAACTCCAATTACTTCCAGCAGCTTCAGGGCAAAACCAACATCCTCCTGCTGGGAGACTCCATGGGGGACCTCACAATGGCTGATGGGGTTCCTGGCGTGGAGAACATTCTCAAGATTGGCTTCCTAAATGACAAGGTGGAGGAGCGGCGGGAGCGCTACATGGACTCATATGACATCGTGCTGGAGAGGGACGAGACGCTGGATGTGGTCAATGGGCTGCTGCAGCACATCCTGCAGCAGGGTGACTGGACAGAGATGCAGGGCTCCTGAGCGCAGGCGGGGCCTGCCGGCTGCAATGAGGAGGGGCCTTCCCGGAAGGCCGCTCTGCTCTGAGCTCTGCTCCTCCTGTGCGTGCAGAGTCCTCCAGAGAACATTCCAGGCTGCCGGAGCCGCTGGTCACACCCCTCCCTCCTCCTCTCCCCGGCTCCTTGGTTTTGTGTTCTCCTTGGTTTTGTGTTCTCCAGCGTTTCGAGGGAGCCCTGCCAGAAGGGAGGACAGTGAAGGCTGTTCCAGGTGAACTGCGGACCTACGCGGTGTTAGCAGTTTAGGAATCAGCTGGTCCAGGGAATCTTTTTTTCCAGAATTTTTTACCATAGGAAGCTGTTCTTCAAACAAGTCAAAGTCTAATATGTGAAACAGATCAAAAATAAAAAAAAAAAAAAAGGAAAAA EMBV3_41769 GGTCTGTATGAGCAACATGAACAGGAGCATGGAAGCCCACAGCATCCTCAAGAAGAAAGG Gene GeneID:785853|LOC785853:XM_002693393:39_cdna Constitutive 0 NULL GeneID:785853 15 GENE LOC785853 NULL similar to hCG1991759 EMBV3_21166 GCCATGTTCCACCTTCCTACGTTCAAGCAATGACCGAGCGCCTATTTCCACCCTGTGTAA Gene BVV0102_369292 + 0 NULL GK000030.2:40464917-40469570 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246424 TCONS_00246425 TCONS_00250431 2 XLOC_150974 XLOC_153374 NonCoding TCONS_00246425 XLOC_150974 NonCoding NonCoding - X:17253334-17258733 - TSS184740 4417 1 TCONS_00246425_5 113 0.227756395743717 2 0.182104483141904 7.89924840275868e-05 5.54524771070311e-05 0.000261518359929485 1.63500663579183e-17 8.23069941259031e-05 5.9949141617922e-05 0.000324989956189726 5.79335932699861e-05 0.000142505256214616 3.79870194679615e-05 8.0846576299549e-06 8.96268257603066e-08 1.25390047880617e-09 0.000219351030363673 2.97360930205552e-05 7.034606007338e-07 0 0 0.000236417530097748 0.0001891321580863 3.62188588911029e-28 0 2.26825639369493e-07 0 0.000369545145237305 0.000479976622598871 7.22585808291562e-12 3.33790859495866e-07 1.64859737513898e-06 1.46688719579982e-07 XM_005227672.1 SLC10A3 PREDICTED: Bos taurus solute carrier family 10 (sodium/bile acid cotransporter family), member 3 (SLC10A3), transcript variant X1, 0.0 1023 93.10 0.150781073126556 0 noncoding 0 0 0 0 -0.204100429151091 0.214124899268462 -0.00505342179972688 0.913317179908441 TGCTTAGCCCTTATCCAAGCTAGGACGCCCGGGAGCTGCTGCTTAGTGGTGGGACCCGGGAATCAGGGTTTCTGTCACGTGCCTTCTCTGGGCGCTAGCCCTGTGGCCAGAGGGCCGACTCTCACGGATCCAGACTCTGGGACCTAGTCTCAGCCATGTTCCACCTTCCTACGTTCAAGCAATGACCGAGCGCCTATTTCCACCCTGTGTAAGATCAGTGGATTTTTGAACGTTTCAAAACTATTTGGGGCCACCAGCAGGGTCCGGAAGTTTCAAAACTATTTGGGGCCACCAGCAAGGTCCTAAGGTTTCACGGAGAAGGAGTGCAAACACATGGCATAAGGAAGGGCAAAAAAGTGGTGAAGGTGTAAGACGTGGATGTGAGAAGACAGTGAACAAGTGTAGAATCAAAGGAGCTTTGTATGGTCCCAAAGGTTGCTGGGCAACCGCAGTCAGGGAGTGGGACAATAGCTACCCACTGTTCTGGAAGAACTTCTTGTCAGGGCTGTGATGGAGGCCAGTGGTGCCCAAAGTTGCAGGTTCTTGCCCCAAGAAGGTTTTTAAGACACATCGTAGAGAATGTCCAAAAAGACCTGTAGCATATCTATTTTTATTTATTTTCCCAATAAATAATAACTGTAATCATCTAAATAAAAACCTATTAATTAAAAAAAAAACTTAAATAAGGATCATTTCTACAAACTATTAGAGCTTACTGGTTTAAAGATAGCATACATGTGTTCAGCAGAGTAACATTTATTTAGTGAATATCATGCACTGGACATTGTGAAGGGCTTTCTATACATTTAGCTCATTCCCTCTGACAACTGGAGGATTGTTCTCCCAAGTTTATAGACAAGGAAACTGAAGCTCGAGAGACTCCACTGTTATTAAGGGGGAGAGGCATGACTTGAACCTAGTTCTGACTAATCCCAAAGACCATGTCCTTTCATTTAAGCCAGTGGCTCTTAACCATGGCTGCACATTAGAATCAGCTGGGGAGCACTCAAGCCTCCCAACACCCAGGCCCCACCCCAGCCAATTAAAGTGGAGTTCCTGGAGGTGGGCTCCAGGCAGGGGTAGGTTGTAAAGGCTCCCCAGGTGAATCTAATATACAGCAGTAAAACCACTGCTTTGTACCATGCTATTTCCAAGGTATATTAGGCCAGCATAGATGTGAAAACAACTATTAGGCCCTCTGTATATTTGTAGCACTGGTTGCTTCAAAAAGCAAGACTGAAGTTATTTAAAGGCACTAACATCAAACGAATAGTGCTGGAGAGACAAAGCCTGCAGTCCCCTGTTCTGATGAGGGAACGAGGGTAGCCACCTATATTCCCTTGTAACTTCCCACCCCCTTGAAGCTTCTGCAGCTTATTTCTCTGAGTCATGTGCTTTCCCTGTTCACCGCATTCAGTTCTAGAAGCTGGCCTATCTACTGGGTGAGCAGACTACAGAGTCAGGTAATCTAATCTCCACAGACCTCCATTTTTCCTCAGTTTGCCTGGGCAGCAGACACCACCGAAGAGAGTTTTGGAAGATAAACAGAATGTGTCAACACATCCAAAATGTTTCCCTCATGTGGCTCTCAGCTCACACTTCTTTCGAGCATTGGAGCCATGCGACATTTCCATGCAAAGAAAGTCTCAAAATAGCAAGCAGTAAACAGAGCCAGGGAGCCTGATGTAGCCCTGCCCCGTGCCAGCCCTGGGTCCTGCTCCCATCCACAGGGAAGCCAACTCTTTCCCTCCTCAGACAGCCAAGCCAGGCTACATGGTCAGATAATCAATGACAGGTGTCACGCCCCATAATAAACTTGAAGGAAACAAACAGACACATATAGAATCCTCCAGGCTTGACTGCTGCAGGAGCAGCGTTGACTGGCACCTTACAAAGAAGCCCTACACGTGGGCCTGGATCATTCCATCCCAGGTGCCCTTGGATCGGCAAGGAAGGTGAGAGAGCGGAAGGGGCCCCAGGAACTGCTCAACTGGGGAGGCTCTAGCCAGCAGGGACTGGGCCGAGACACCGGCAATGTTTATTCAGCTTACAGCTTTCATTTATCCTAAGTCATTTCAATGAGTTCAAGGAAAGAAATTATTCTACTGGATTGAGTCCATCCCTAAATATTTGGGACACACGCTGAAAGGTTAGAAGCAAACTCCTGCAAAGAAATGATTGCTGGAATGAGGGAGTTGGCTACCAGAGGAGGCCTGGGACGAAAGCCAACCATGACCCGGGAGGGAATCAAGCGCAGTGAAACGATCCATGAAGTTTCTTGGCATTTTCAAGCACTCCTGGAAAGAGAGTGGCTCATCAACTTCACTGAAGAATCTCCGAACAAATAGCTCCACTGTCTCTGGGTTTCCTGGCCTCAGAAATGGGCTGGGCAACTTGACTGAACACTGGGAAATGAACATTTTGAGTCTGGCATCTGAGGCTTTCTACTGGGGTTCAGGGTGCTTCAAACAGCTTGCTGTGATCTTCAAGGTTGCCCAAGTGCCAGGCAGAGCCCCAGGAGAACAGGTTTTCTCAGCCCTACCTAGACCTACATCTCTTGGCCTCTCGTTGTGTAGGATGGATTTGAGTCAAGCATGTCCTTTGTCTTGAAAACAACAAAATGAAAAACCAAACCTATCAAAACTACTCCAACGAGGCGGTGAATAATTTTCCAACAAAAACTTCCTGAGAAAAAGAGAGAAGGGACTAATAGAGTCAGCATCCTATTAGATTGAGGCTTCCCTGGTGGCTCAGATGGTAAAGAATCCACCTGCAATGCAGGCAGACCAGGGTTTGATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATTCCATGGACAGAGGAGCCTGGCGGGCTACAGTCCATGGGGTAGCAAAGAGTCAGACATGACTGAGCAACTAACACACACATTGTTAGAATTAAGGGTCAAGAGCAAATTTCCTGTTTTGGAGAGCTTGGGCCACACTTTTGGGCTTCGTTTTTGGAAACTCAGCACCAGCAAGAGGAGGTGGTGAGCACTTGCCTTGGGAGTTCTCCGCCAAGAATCAGGGACCCAGGCCCAGACCCTGGATCCAGTCCTGGAGCCCAAGGTGGAGCCTGCTACAAAGAATGGACTGGAGTTGCTACAAAGGGGAACAAAAAAGGGGGTTGGAGAACAAGGACAACCTAGATGCCCACAACAAACCAGGGTAGAGGCCGGGACATGTGTGAGACACAAAGTTGGAGGGGCTCCACAGACACCGGGCCCTCCAGGCCTGGCTCTGCTTCCCAGGCCCCTGACCCTGTCTGTGGAGAAAGGGTGCCGTGAAGGAAGGATGCACCCCTGGTGAAGACAGTCACGTCACCCGCACGTTATAGCACATTGTATTTTTTGAAGCATATACTCCTGCTTCCAAGAAAGAGATCACAGTTTCATTTGTGGGAGCAGTATCCCCAAAGTACCCAACAAAAGACCAGAAACGAAGAGGCAGGCACAAAGACCTCTCACCAACATTCCTTCGAGCAAAGCAAAGCATTACCACGGGGCTATTTTCATGGCAAGAGGCTCATACGCACTTTAATCCTGAAGAAGCAAGATGAAACACCCTACAATCTCTGTTTCAAATCCATGTTTAAATTTTACTTTAAGTGTTTTATGATAAGGGATACAAAGTCTTACTTAATGTACCTTCTAAGGATTTCTTGTCCTGAAGCAATTTGTAAATGTTGCAGGGTGTCAGAAGTCGGTTTCAGTGCAGAGAAGGAGCTGTGTTCTGAAATCCCAAGGGGCACAGGGCTAGGAGGAGGCCCTGGGGCCATCTGATGGGAAGAGGAGGTTTCTCATTGCCCTGGAGTCTCCCTAAGAGTTTATTACTTAAGATTGGGAAACCTTGAGCAATAGGGCTTTGGGATTTCATCTCAAAATCCTCTAGGCAGCAGATTGCTCCCTTCGGGCTGCTGCTGTGTGTTAACAAGGGATGGGTTAGAGCATCTGCTGCAGATGCAGGGCAAAGCATGAGCAGGTCCTAACCTCCTTAGAGGTAAGCTGAGAGTGCTGGGCCCAAGTTGGAGTCAGCAAACTTTTCCTGGGAAGGACTAGCTAGTTAACAACAGGAAATATGGATCACATATGGTCCCTAGCATATTCTTTCTTTTCATTTTTTAAACAGCTTTACTGTGATATAATCTGCATATCATGCAATTCAGCCATTTAAAGTATATCATTTAGGGACTTCCCTGGTGGTCCAGTCGTTAAGACTACATACTTCCACTGCAGATGGCATGGGTTCGATCCCTGGTCTGGGAACTAAGATCCCACATGCCATGGGGTGTGGCCAAAAATTTAAAAAACAACTATCATTTAGTGGTTTTCTGTGCATTCACTGTGTTGTACAATCATCAC TCONS_00246426 TCONS_00246427 TCONS_00246428 TCONS_00246429 TCONS_00246430 TCONS_00246431 TCONS_00246432 TCONS_00246433 s 3' 49230 TCONS_00246426 TCONS_00246427 TCONS_00246428 TCONS_00246429 TCONS_00246430 TCONS_00246431 TCONS_00246432 TCONS_00246433 s 3' 46791 EMBV3_19711 CAGCAGGGTTTAAGTTACACATATCTCAAATCTAAGATCTCATGAGGCAGCTTCTGAGCG Gene BVV0102_437609 + 1 EMBV3_00286 GK000005.2:23364473-23370701 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194130 1 XLOC_117679 Coding TCONS_00194130 XLOC_117679 Coding Coding UBE2N 5:23368837-23374770 j TSS144936 3334 1 TCONS_00194130_2 152 0.0473905218956209 6 0.438975050573163 6.17422326452385e-112 3.55073860447206e-05 1.38532163981915e-53 4.38399936032386e-77 6.15145399505046e-05 1.56005233738008e-83 2.78322489208589e-05 0.000166197864746978 3.708482185935e-05 4.89133355399446e-40 3.56880917434953e-55 6.98061285712564e-60 2.07273163397831e-58 5.13143408996283e-05 0.000179085304813392 0.000349211173810998 0.00142707249072801 1.2242141714529e-46 1.36170542146666e-05 5.27713907804325e-05 6.8584992111301e-06 0.000175925901388692 0.000180936091745157 0.000290120368867962 0.000206640234107456 0.000168461252971109 5.7504118059487e-05 3.75832907859274e-05 6.1966628608423e-05 3.67962079695772e-05 NM_001076258.1 UBE2N Bos taurus ubiquitin-conjugating enzyme E2N (UBE2N), mRNA. 0.0 3846 99.81 0.64247150569886 NM_003348.3 UBE2N Homo sapiens ubiquitin-conjugating enzyme E2N (UBE2N), mRNA. 0.0 2782 89.01 0.647570485902819 TCONS_00194130_2 sp|Q0P5K3|UBE2N_BOVIN UBE2N_BOVIN Ubiquitin-conjugating enzyme E2 N; 2e-103 297 95.39 0.993421052631579 1 coding 0 0 0 0 -0.216633514556918 0.300301279493278 -0.00358943190024617 0.938818004078593 TTTTTTTTTTTTGAGAAATTACATTAGGTTTGTACAGTTGGGGAAAATCCAATAGAGGGGAAACGGTGATTCAGGAGAGGAAGGCGATGCTAGAACAATGTCCTTGAGGAGACATTTGTAGCTGCAGTTGTACATGATGTCATCAGTATTTGCTGGTGGTTGCTTTCAGCTGCTTATGATGATTTATGTTTTCTTTGAACTTTACATTTTATAAGGAAACCCAGCGTTTGCTGGCAGAACCAGTTCCCGGCATTAAAGCAGAACCAGATGAGAGCAACGCCCGTTATTTTCATGTGGTCATTGCCGGCCCTCAGGATTCCCCCTTTGAGGGAGGGACTTTTAAACTTGAACTATTCCTTCCAGAAGAATACCCAATGGCAGCCCCTAAAGTACGTTTCATGACCAAAATTTATCATCCTAATGTAGACAAGTTGGGAAGAATATGTTTAGATATTTTGAAAGATAAGTGGTCCCCAGCACTGCAGATCCGCACAGTTCTGCTATCGATCCAGGCTTTGTTAAGTGCTCCCAATCCAGATGATCCATTAGCAAATGATGTAGCGGAGCAATGGAAGACCAATGAAGCCCAAGCCATAGAAACAGCTAGAGCATGGACTAGGCTATATGCCATGAATAATATTTAAATCGATTCGATCGTCAAGTGTGCATCACTTCTCCTGTTCTGCCAAGACTTCTTCCTTTTTTGTTTGCATTTAATGGACACAGTCTTAGAAACATTACAGAATAAAAACCCAGACATCTTCAATCCTTTGGTGATTAAATGCACATTAGCAAATCTATGTCTTGTCCTGATTCACTGTTGTAAAGCATGAGCAGAGGCTAGAAGTATCATCTGGATTGTTGCGAAACATTTAAAAGCAGTGGCCCCTCTCTGCTTTTATTCGTTTCCCTCATCATGGTTTAAGTATAAAGCACTGTGAATGAAGGTAGTTGTCAGGGTTAGCTGCAGGGGTGTGGGTGTTTTTCTTTATTTTATTATTATTATTTTTTTTTTGGTGGGGGGGAAGGTAGTTTTATTTTAATTTTATGGGCTCCTTTCCCCCTTTTTATGGTGATCTAATTGCATTGGTTAAAAGCAGCTAACCAGTTCTTTAGAATATGCTCTCTAGCCAAGTCTAACTTTATTTAGACGCTGTAGATGGACAAGCTTGATTGTTCGAACCAAAATGGGAACATTAAACAGACATCACAGCCCTCACTAATAACATTGTGACCTTGCTGTCAAGTGTAGAATCCTCCCTTCAAGAAAAAGCTTGTGACCATTTTGTATGGCTTGTCTGGAAACTCCTGTAAATCTTATGTTTTAGTAAAATATTTTTTGTTATTCTACTTTGCCTTTGTACAGTTTCTTTTACTGTGTTTATTTCATTTTCCCAATGTGACAATCGTATTTAAAAATTATAAAACTGATGGAACATTCTATTTTGATCTTCACCATCTGACAAATTGAATGGCGAGAGGTAGATTTTGCCAATTTCTTTTCACTGATGCAGATTTGTGTTAAGATATATCACTGAATGAAGTATTTATAAGCTGGCCCTGAGCATGCCTAAAACATCAGTATGTGACATTTTTTTTTTTACCTCCTAGAAATTTGAAATAAATGTGTGTGTGTTGTCTGATTAGTTAGGCGATCATCGGTGTCTTGCCACAGTGTTTGGAAATTACTGTTCAGGAGAGTCACAGCACAGCCACACCAGTGACTGACTTTGTGTGGGACTTCTACTTGTGCCACAGTTGTGTCTGGCATTTGAGTTATGACCTTGCTCTTAGTTCTTGTCTCAAAACTTCGTGTGTGACCACTGTTATTAGAAAACAGCAATCTCGTAATCATTTGGGGTTTGCTGAGGCATTTATCAGTCTTTCTTGCAGAAGTGCTGAGCAGATCTCAAGCAGTGAGCTTGCATAAGCGTCATCAGAAAGGTTTCTTCCTTAGAGGGCATCAGATCCTCAGTTAATGATTCTTACTGTCATCCCTGTAATATTTGGTGCGGGAGCTCCTTTTATTCTTTGATAATCTGCAATTATCTGCATTGACAGAGTTCTTCCCCACCACAAAGCTGTTCTTTCCCACCTTTCCATATCTAATTCCCAAGTCTTGTTATTTTAAGACATTAATGTAGTCAGTTATAAATAAGTATGTAAATGTTAACCTGTGGGTTGGAACCTTTGTCTCTTGCAGTTTAAGGTAATGGATATTGTAGCCCATCTGGATTTTCCCCACTCTTATTCTCATACCTTCTGGAGTTTCTTCAGAATGTGGTGTATTTTATTGTGCTCCTATGTAAGATGAAGAATATCTATTAAAATTACATTTTCAACATACAAAAGTTTTTGATGACTGGTAACTGCTTATGGATGCACTCCTACTTGTCAGGGGTGATTAGGTACCTGAATGGGACTGGCATAGGATGTTCCCTCGTGGACCTCCTCATCTAATGAGGGATGCGGCTGGGGCACATGGACAAAGAGCAGTGGCAGCTCTGATGGAGAGGGGAAGTAAGCGCTTGGGAGGGACTGCTCTTCTGGATTCAATACCTCCAGGCAGGGGACCAGCTTGTGCAGAGCCCTGGGAGCAGAGAAGAATCTGAGTATATTGATAAATGGCTTCTTGAACATCAACTGCCCATTCAGAAGCTTTTCTGAAATCTGGAGGGGTTGATATGAGCCTTATGTTTTTCATGTGATTTTTGAATTTTGTCTCCTTTGCTGTGATTCGCTTCCATGCTAGTGTTGGTCCGCTCAGAAGCTGCCTCATGAGATCTTAGATTTGAGATATGTGTAACTTAAACCCTGCTGTAGACCAAGAGCATACTTTAATACAAAATTTCAGAAGCATTTAAAAATAAACACAATACCTAAAAAAGCCATAGGTGCTATGGTTTAGCACTCGTAAAGGAGAGTATGGGGTGGGAAATCCTGTAAAACATTAACAGTTTTAGCTAAATGGAACTACATGGTATGGGAATAATAGGAATTGGCTACTTAACTCGAGCCATACCAACTTTTTGTTAGTTGCAGTTGCAAAGGTTTAAAAATAACAGCCTTACCTACAAAAGCTGGCCAAAAGAAAAAGGTAAAATGCCATGATTATAGGGCAGCTAATTCAACAGTCTATTTTAAAAAATGTAATTTCATTGGAATAATGTATTTTGGGACTGGGGGCAACATTTCATTTAACCGTGCAGCATGCGCTTAGTTTAAGAAATTATATTGGGGGTTATTTTTAAATGACTTAATAAGATCACAAAAACAAAACATGTTGAATGTAATAACTTGGAATATTAAGAATAAAAATCTGTACACCACCACC EMBV3_42636 TGTTCATGGTAATTCTACATTTCTAGCAGGTTCTAATCAGCAAGGTGGGATGACAGTCCC Gene GeneID:537517|TLK1:XM_002685281:67_cdna UTR3_Alt 2 NULL GeneID:537517 2 GENE TLK1 NULL tousled-like kinase 1 EMBV3_06194 CATGCAGAAGTATTTCAAACTTGTTCTGAGGTGGCCTTAGAGATGCTCTTCACTGGGGAG Variant GeneID:617368|ECHDC3:XM_002692051:39_cdna 391^591 1 EMBV3_35840 GeneID:617368 13 GENE ECHDC3 NULL enoyl Coenzyme A hydratase domain containing 3 EMBV3_05649 AGGTGGTGGGCTGTGGGACTTGGATATCTTTGCACAGGAATTATTGGGGTCTTGGGAGGT Gene GeneID:617710|BCAS4:NM_001076474:1324_cdna Constitutive 2 NULL GeneID:617710 13 GENE BCAS4 MGC152217 breast carcinoma amplified sequence 4 EMBV3_16944 GGCGCCCCTCCTCTATGTTGGGAAGGGTAAAATCACACTAAAAATGATCAACCTGGAAAT Gene BVV0102_232627 - 0 NULL GK000015.2:6707388-6730533 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05577 CAGGCAGCTTGATTCCCCGACTTCCCAGCGTCGAGCCTGGACTCGAGCAGCAGCTACGAC Variant GeneID:614193|MIIP:XM_002694038:103_cdna 130^313 3 EMBV3_19766 GeneID:614193 16 GENE MIIP NULL migration and invasion inhibitory protein EMBV3_21305 ATGGGGCTCCGAAACATCCTCAAGGTTTGCTGTACCCACGACATCACGACCGTCAGTATT Gene GeneID:100336724|LOC100336724:XM_002687889:80_cdna Constitutive 0 NULL GeneID:100336724 5 GENE LOC100336724 NULL CG9986-like EMBV3_37977 CTGTGGAAAGGAAGGTGCTGGACAGTGAGGATCAGAAGGGCCAAAGCTTCTACTCGATCT Gene GeneID:524354|TMIGD2:XM_002688933:127_cdna Constitutive 0 NULL GeneID:524354 7 GENE TMIGD2 NULL transmembrane and immunoglobulin domain containing 2 EMBV3_15875 CACAGCTTAGAACACAAAGTCAGTGAGGGCAGCGAGCAGGTGTCCGAAGAGAAAACAAAT Gene GeneID:535183|ZEB1:XM_002692126:82_cdna Constitutive 0 NULL GeneID:535183 13 GENE ZEB1 TCF8 deltaEF1 zinc finger E-box binding homeobox 1 EMBV3_42727 GATCTCTTGGGAGGAGGCCTAGATAGTCTGGTGGGACAGTCCTTCATCCCATCATCAGTG Variant GeneID:282183|AP2B1:NM_001075125:185_cdna 203^244 1 EMBV3_06713 GeneID:282183 19 GENE AP2B1 CLAPB1 adaptor-related protein complex 2, beta 1 subunit EMBV3_21225 TTCGCTACCAGATACAACGTGGGGTTGTGGTTCTGGCCAAGGGTAACAACAAGGAGTGGA Gene GeneID:782061|LOC782061:NM_001166223:12_cdna Constitutive 0 NULL GeneID:782061 13 GENE LOC782061 MGC129134 similar to AKR1C1 protein EMBV3_16191 GTGATTCCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTG Gene GeneID:540475|CUGBP1:NM_001101212:93_cdna Constitutive 0 NULL GeneID:540475 15 GENE CUGBP1 CUGBP1 CUG triplet repeat, RNA binding protein 1 EMBV3_23884 TGTGCTGAACAGGATGGATCTGGTTGGTGGATGAACAAATGTCACGCTGGCCACCTCAAT Gene GeneID:280792|FGG:NM_173911:14_cdna Constitutive 0 NULL GeneID:280792 17 GENE FGG MGC127951 fibrinogen gamma chain EMBV3_25795 CCAGGGCTGGTGTATATGAGTCTCTGTCTCTTTAAGTGGTGCTGTTCCCCTTTGCCACTG Gene BVT0102_310127 + 0 NULL GK000017.2:51623305-51645790 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080666 1 XLOC_049550 NonCoding TCONS_00080666 XLOC_049550 NonCoding NonCoding - 17:51630281-51631063 - TSS60606 782 2 TCONS_00080666_1 45 1 0 0 0 1.18337642761543e-05 0 0 0 0 0 5.04483638621714e-06 0 1.1221504332321e-05 4.57249599412877e-06 0 3.90996729396451e-05 0.000193445467824968 0.000303969794124853 0 0 0 0 0 0 4.30156493145548e-05 0.000353728985148577 0 0 0 0.000255892492409336 3.10397099104017e-05 7.6882973456178e-06 0 noncoding 0 0 0 0 -0.0282292336062957 0.849279053665248 0.0175265270338932 0.718473112672478 CCAGATGCTAGCGGAGTGGGGAAAAACCCGACGGTTTGCAACAGTTGATCCCCATTGTTCAGGGACACCAGAGCCTTAGGGTACAGAGCTCACTCTGTGTCTCTTTATCTCTGCTTCTGGCATAGCACTGTTTTGGGCAATCCTTCTATGTATGTACCAGGGCTGGTGTATATGAGTCTCTGTCTCTTTAAGTGGTGCTGTTCCCCTTTGCCACTGTCTGGACACCAGCACTCATACAAGAAGCTTATCCTTGCCGTGAAGGCAAGCCCTTCTCCTCCTGAGTGATTTGCACTAACCTGAGATCAGACTTTTTTTTTTTTTTTAATGTATTTAAGAAAACAAGAGCTGCTTCTTGGAAAAACAAAATCAGAAACACTGATACAACTGTGGCAATCTAATAAGGGGAAGAGGAGGTTAATTCCAGTACTAGAAATGAGAAATGGAATGTGGTTCTGAAACGATAATGTTCAAATCTGAGTGGAATTACTTTTGTTTCAGGAAAGATCCAGTCAAGCAAAACCCTGGGGAATGAAAAGGAAGGAAAGAAAGAGGAAGAGAGTCAGGGGAAGAAAGGAAGAAAAGGAAAGGAAGGGAGAAAGATAGAAAAGGAAATGTCTCAACAGATATTGTAAACTTCCCAATAAAACAATTCTCTTTAAAATCTAAAAACAGAAATAGAAATTCATTAAGCCATATCCTCATTGCCCTTGATGGTACTAAGAACAAGAAAACCCATTTACACATCAGTGTTTAGAATTTGTGGCAAACACAATACGATTATG TCONS_00077240 . 3' 14728 TCONS_00077240 . 3' 15509 EMBV3_33105 CCCAGCCCCAAGTGACCACTCGTCTGTTTTCTGTCTCTAAAGATATGCCTACTCTGGACA Gene BVT0101_010537 - 1 EMBV3_29102 GK000013.2:60492006-60505461 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045819 TCONS_00045818 1 XLOC_026537 Coding TCONS_00045819 XLOC_026537 Coding Coding PSMF1 13:60502197-60545001 = TSS33360 4616 1 TCONS_00045819_3 270 0.17157712305026 7 0.892320631731421 7.86260090000433e-05 0.000113317247113052 0.000302358920118499 0.00010090995198351 0.000106174118337286 1.02084645448165e-05 4.37511184777248e-06 0.000382030209545079 0.000181324576031587 4.26219854675135e-05 2.02460173920218e-06 1.91512850577513e-05 2.03023042333218e-05 3.28255269067437e-07 0.00010355641203592 0.00154845658589609 2.35830911901187e-05 0.000285090370195297 0.000486251729275846 0.000438578184195347 6.02877822514111e-05 0.0005541920954341 0.000175777779361197 0.00109651655640707 0.000161884886609547 0.000618043435893948 0.00033664657835152 9.97635434906716e-05 6.6165807668386e-05 0.000126540317795291 XM_005214859.1 PSMF1 PREDICTED: Bos taurus proteasome (prosome, macropain) inhibitor subunit 1 (PI31) (PSMF1), transcript variant X1, mRNA. 0.0 3059 100.00 0.367201039861352 NM_006814.3 PSMF1 Homo sapiens proteasome (prosome, macropain) inhibitor subunit 1 (PI31) (PSMF1), transcript variant 1, mRNA. 0.0 1842 81.98 0.378682842287695 TCONS_00045819_3 sp|Q3SX30|PSMF1_BOVIN PSMF1_BOVIN Proteasome inhibitor PI31 subunit; 0.0 554 100.00 0.996296296296296 2 coding 0 0 0 0 -0.177447401710872 0.368892185230651 0.00577777744882083 0.91044640792575 GTGGCCACACCCCCGCCTCTGGGCGTCTCCATTTTGGTCGCGCAGGTTGACATTAGACCACTACCTGCGGAGTAGCGGAGAGGAGTCAGCAGTGTTGTGAGGGCCCTGTCGGCTCACCGCACTTTCTTCCTCCCTTCCTCCGCCCGCAGAAGCCAGGGTCGCCCATGGCTGGCTTGGAGGTACTGTTCGCGTCGGCGGCGCCGGCCATCACCTGCGCGCAGGACGCGCTTGTCTGCTTCCTGCACTGGGAGGTGGTCACGCACGGCTACTACGGCTTGGGTGCCGGCGACCAGCCGGGTCCCAATGATAAGAAATCAGAACTGCTGCCAGTGGAATGGAACAGTAATAAAGACCTGTATGTCCTCCGGTATGAGTCCAAGGATGGGTCCAGAAAGCTACTCGTGAAGGCTGTCACCGTGGAGAACAGCATGATCATCAATGTGCTGGAACATGGCTCACAGCAAGTGTCAGATTTGACCCTGAACTTGAATGATTATATCGATTCAGAACATCTGGTTGACTTCCACAGGGTCTACAAGAACAGCGAGGAACTTCGGTCCCGTATTGTGTCTGGGATTATTACACCTATTCATGAGCAGTGGGAAAAAGCCAATCTAAGTCCCCACCGGGAGTTTCCCCCTGCCACTGCCAGAGAGGTGGACCCACTCCGGATTCACCCACAACACCCACATACCAGCCGACAGCCTACCTGGTGTGATCCCCTGGGCCCGTTTGCTGTCGGGGGAGAGGACCTAGACCCCTTTGGGTGTCGGAGAGGTGGCATGATTGTGGATCCCCTGAGATCCGGCTTCCCAAGAGCACTTATTGACCCGTCATCAGGACTCCCAAACCGGCTTCCTCCAGGCGCTGTGCCCCCAGGAGCACGCTTTGACCCCTTTGGACCCATTGGGACCAGCCCATCTGGACCTAACCCAGACCATCTGCCCCCGCCGGGCTACGATGACATGTACCTGTGAAGGCCTCAAGAATGTAACGTCCCAGCCTTCCCTCCACTGTCCTGGAGCTGCCACCGCGGGCCCCTTCAGCACCCGTTTTCTTGCGGGCTGGGGGCAAAGGACTCTGTCCATGTGTTTGCAGGCCGGCTGGGATTGCCTCCCCACCCCCTACCAGAGCCAGGGCACCTGCTGCAGTTCTCCACCTGGCTGCATATAGGTCCCAAAGAGAAATCAGTGTGTGTCTCACCACCAGCTCCTCTCCACTTCGCAGGGGAGACTCCGGCAACATATGCCCTTGACCCGATGCAGTTCCAGCTGCATCGCTATAAGAACAGAACCCATTTTGGATGTTATTATTAAGAACCAAATGTCAATACAAAAATCATGTTGCCGGTCTCCCACTCTTCTTTACTGCACAGCTCCTTCCATGTATGAGACTTGAGAGTTTGGATCTTTGAGGGGCTAAAGGACTGTCTTAGGCATCTTCCTTTCATGAATTGCTCTCACTCCTGATACCACTAAGATGGTCTGGCTGCATGGATGAAAATGAGTGACTGGAACCCCCATAGGCCACAGGGATGACTTCCACAAGGCCAGGCGCATTGCAGAACGACTGCATCTCTCTGCAAAGGGCAAGACGTTCCAGTTCTGCTTGTCTGAGCCTGTCCTCTGGGTCTGTCTGTGCCTGGGCAATGGCCGCCTTCAAACAGAGGAATAAACAGAGCAGACCTGAAGGCTAATCTCTTTTTTGCCACTAACTTAACTGAGTGACCCTATGCAAATCCCTTCCCCTTCCAGGGCCACTGTGCCCACCTGCGAAATCCGAGGTGCCTTTCTTGCTCTAAAACATCCTGGTGTCGGCTTCTATGCGTGATGATCCCTAGTAACTGGGGCAAAAGGTAAAGAATGAAGGTACAAGGCTTTGTGTGGCGATTACCTACAGAGTCTGCAACTCTGTGCCTCTACCCACCGTGAGGCCCCGACATGAGCATAGCAGCACAGTGCTGGACATAGGGACAAGCAGGGAGCCTGGCCTCTAGAAGCCAGTGTGTGACAAGGGTGAATGGAGGAGTTGGTGATACAGGAAACAACCCAGGAAGGCATTCCACCCCCAGGGAGCCCCAGCCTCTGGAAGTCTGTGCCCTGTATCCAGGCCCACCTGACCTTTGGTGTTCTCCAGATCCTTTTCAGCCCTAGGCCTGACAGACGTGTTCAGTGATGAACCCCTGTGCTGGAATAGAGAAAACACCCTAGAGCACCAGACTCCGAGGCAAGAGATGAAGGCACTAGTCACTTTCACTCCACCGCTAGCATTTCAGCCATGGGTGGTGCCTTTTTCAGCTCCTTGGACTCCTTTCTCTAAATTAGGAGATAGTATTTGTCTGTGGGCAGAGGGCTACCAGAGCCTTCCTAAGGCATCTGCTAATGTGCTATATAGCCTGGAAGTGCCTGTCTGCTGTGCCCAAGAGTGGGTTACAAGTAAACTAGACAAGGCATATATGCCCAGGGTCAATCCAAGATGCCACCTGGGTATAGGTGGGGAGGCTAGGGCTTCCTGGGCGTTTCTGGCAGGCCGCATTTCAAGCACTGATTTAGTGAAGGACCAGTGTAAAGCTTTTAGAACAGCTCTGCTCTGGAAAAAGACCCAGAGGTCAGGCAGAACTGCAAATGCAGTCATCAATGGCCATCTTCCCCAAGAGCCAGCAAATGGGTGAGATGTTTTGTTTGGAAGCTAGATCATACCTTCTACAAAGAACTTGAGGCAATTTGCTCATAAAAGCATCCTTTATTATAAAAAGAAGCATTTAAAGGAACATCAGACAAGCAGGGGAAGTAAATAACTTTTAGGACCCTGATTCAGGGGAAGGACAAGATTGAAACAATAAATTCACCACTTAGATTTTCTAATAGTGAAAGTGGAAAGGATAGTCATAAGCATAATACTGTTTTCTGAAAACAGAAACTTCAGTGATTCATCTGCAGAATCAGTCATTTTTTGAGTGGGTCTCCTTGCATTAAGGACTGAGGAACGCAGACTGTGCCTTAAGTTATGTGTGGGGAGGTGAATGGGACCTTCAGGAACTTCCAAGTCAGCCTGTCAGTACACGTTGTGTATCTCAGCCACTTCCTCCTTCCAGCCATGAGTAATCACCGAGCAGCCAGAGGGAGTGATTCAGGTACGTTTTGTGGAACCTAGAAGTGTTAGAGCCTTAACAGTAAATACCAGCACTTAATAGCCTGTTCTTCCTTTTTAAAAATAACAGCTTTATTGAGATACAGTTCACATACGCATAAAGTTCATGTTTTTTAAAGTGTACAATTCAGTGTTTTTAGTACATTCACAGTGTTGTGCACCCATCACCATATCTGAGTTCTGCACATTTCATCATCCAAAAAAGAAACCTCATACCCATTAACAGTCACTCTCCATTCCCTTCTCCCAGCCCCAAGTGACCACTCGTCTGTTTTCTGTCTCTAAAGATATGCCTATTCTGGACAGTTCTTACACGTGGAATAACACAATATGCGGTCTTTCATGTTTGGTTCCTTTCAGTTAACGTTTGCAGGGTCCATCCATGCTGTAGCGTGTATCAGTAATTCATTTCTTTTAATGGCTGAATAATATTCCACATTTTCTCTATCCATTTATCAGTTGATGGACAGGTTGTTCCAACTAAAATAAGGCTGCTATGAACATTTATGTACAAGTTTTTGTTTGGTCATATGTTTTCCGTTCTCTTGGAGTGGAATTGTGGGATCATATGGTAACTCTGTGTTTAATTTTTGAGGAACTGCCAGACTGTTTCCCAAAGTGACCGTGCCATTGACATTCCCATTAGCAGAGTATGAGGGGCCTGGTTCCGCCCATCTCCTCACCTGTTAGTCTTGTGTATAGATATCCTAGTGGGTGTGAAGTGGTAGCTCCTTGTGGTTTTGTCCTCTATTTTAAAAAAACAAAAACGGAATTCTGACCGAGGTCAAACAAGACAGAGATCGCAGACTGTGGCTTTGGTAATAGCCACCTTGGGATTACTGACTGGTGAGACGCAAAGGAGTTAAAGTTTGAATTTTGGGGAAGTTTCAGGGCTGGATGTGATTTAGGAGAAAGGTCCTGTCTATAGGGAAGTTACCATGACCTTTCCAGGTCTGGTGAGATTCATGGTAACCACTTTTGCTTGTTTTGAAATATTTGTATTGACCCAGTGGCTTACAAGTAAAATAAACATCTAGTTCTGAATCTTTGTCTTTTGAAGTGACATAGACTACGTGTACCATCTCTGGCAGTCTCCTCATCCCCAACTCTTCTTCCTTGCCTTGTGTCCTTCCTGATTCTTAGAGCTGGCTGTGTTTTTCATTGCATTGCATTTATCTGCTCATCGTGAGCTGTCAGCCTCCATGGTGAAGTCACTGGTCTCAAGACCCTGACTCCAAGCAGGTATTATGTTCAAAACAGATTTTTTATTCCTGTGATGGATGGCTAGTACCTGTTGCCATGCAGTTAGAAATCGGGTAGCAAGCCCTGTAACAACCTCATTCTTTGAAATCCAAATTCCTTCATAGCTTCCTTTTCTGCTCATTAATGACATTCTATTACTGATCCTTGCCTCTTCATAGAAGAAAACTTAGAGTCTGTGGAGCAGTTCCTGTCTGTCACCTTGT EMBV3_33833 ATAAAAAGTACTGCAGAGAAGGTGCTGGTTCTCAGGTTTGGGAGAGACGAGGATCCGGTC Gene GeneID:510719|TXNL4B:NM_001014897:186_cdna UTR3_Alt 3 NULL GeneID:510719 18 GENE TXNL4B NULL thioredoxin-like 4B EMBV3_30546 AGCCAGACACAGGCAGAGCAAGCTGCTCAGAAATTAAGGGTGCTACAGAGGAAGCTTGAG Variant GeneID:532923|GOLGB1:XM_002684791:139_cdna 646^753 3 EMBV3_30165 GeneID:532923 1 GENE GOLGB1 NULL golgin B1, golgi integral membrane protein EMBV3_28232 CATTTCAGTGTTTGCCAGTGCTCAAGTACAGTGTCTACAAGGTATGTGTGAAAACTGCAG Gene GeneID:100337128|LOC100337128:XM_002690887:16_cdna Constitutive 0 NULL GeneID:100337128 10 GENE LOC100337128 NULL unc-13 homolog C-like EMBV3_00498 AGGAAAGGGGGAAACATGTCCGGACTCCTGGCACTCTTCAGGGAATATAGAGGATCCTAG Gene GeneID:100138264|LOC100138264:XM_002698072:60_cdna Constitutive 0 NULL GeneID:100138264 25 GENE LOC100138264 NULL hypothetical protein LOC100138264 EMBV3_27729 GACACCTCTCCGAACTCCAGCCTGTGAATGAAGTCAACACGAAGGGCAGTTTCCGTGCAT Gene BVV0102_165377 + 0 NULL GK000001.2:5096444-5447784 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32995 AAAAAGAGAAAGTTAAAGTAGGTTTTGTGGATGTGCCTTCATGTAGATATCAACAGCTCG Control NULL NULL 0 EMBV3_30665 NULL NULL NULL NULL NULL NULL EMBV3_05601 TCCCTTGCTTTCCATGTATGCCCTGCAACACAGCCTGCTCATGATTTTGGACATGCTTCC Gene GeneID:538433|ANKRD34A:XM_002686089:34_cdna Constitutive 0 NULL GeneID:538433 3 GENE ANKRD34A NULL ankyrin repeat domain 34A EMBV3_25897 TCTTGGGCCTTCACTGGTAGTAGAAATTTGATGAGAGAAGGAAAGGGAGAGAACTGTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11981 TCAGCTAGCCATCAAACCTTTTCTCTCCATAGTGGGTGTCCCCACAGTTATTTGGCGGGT Gene BVT0102_307213 + 1 EMBV3_21060 GK000010.2:2929589-3206566 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015652 1 XLOC_008531 NonCoding TCONS_00015652 XLOC_008531 NonCoding NonCoding - 10:3204508-3206507 - TSS11009 1521 1 TCONS_00015652_2 198 2 0.23973973973974 0.00131289175217724 8.66400069768927e-17 3.02642868392433e-05 6.70179525071779e-55 2.55591952902828e-90 3.82950083452631e-75 5.69898430284254e-14 6.13265699744211e-56 1.25366640622568e-08 5.23799542611323e-210 0 0 1.33635512275458e-144 1.87822752869803e-18 0 0 0 0 4.37529570720692e-30 2.66396018936575e-30 0 0 2.16141400260386e-09 9.00002792149179e-12 1.04228126330877e-19 9.13953346950647e-16 5.88750403069673e-05 0 1.57888269181215e-08 2.5101310988185e-118 XM_005211182.1 KCNN2 PREDICTED: Bos taurus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), 0.0 1263 100.00 0.45956607495069 NM_001278204.1 KCNN2 Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), 1e-148 531 92.29 0.228139381985536 0 noncoding 0 0 0 0 -0.00878702156787295 0.944311397152589 0.0109207830936501 0.85590946674747 GGCCCGGAGCCCAGGCTGCCGAGGCTGCCCGTGGGGCTGGCGGCGGGCTGCAGGCTGTGGCACTGGTGGTGCTGGGAGGCGGACGCTGGCTGTTGCGCGTACTGCTGCCGGAGCGCACTGGCATGGCTGGACGGCGTCAGCTCGCTCACATTGAGCTGGCTGCCCCGGCGCGACGAGCAGCAGCAGCAGCACGACGAGCCCGACAGCGGCGAGGAAGTGCGGGTCCGGAAGGCGCCGCCGCCGGGCGAGGAGGTACGGAGCAGCAGGGACAGGTTATCCCCCGCCCCCGCCCCCGGGGCACCGGAGGAGGCGCAGCTGTTGCACCGGAGGCATGGGCTGCTGCCGCCGCTGCCCGGCTGCTGGTGCGCGAGATGCGGGTGGTGGTGAGGGTGCGGGAGGGACGCGAAGGGCGCGCACGGCTTGTCCTGGCTCTGCTGCTGCTGCTGGCAATGCAGGTGCGAGGAGCGCGGCGGCGGCGGCTGCTCCGAGAAGAAGCCGCGCTGGAACTGCAATGGGGTTTCCATGTCAGGGCTGTTAAAGCTGCAGGGAGACCAGGCGGTGGTGCACCCTGCGCAATGCGTTATGGTCGGGAGCGGAGACTCCTGCTGCTGGTGCGAGGAAGGGCCCATGCCGGCTCCGGTAGAATCCAGGCGGCGAGTCCGATTGGTCGGGCGCACCAAAACAATGGGCATGACATCACCTGCGGGGACCAAGACTGAGTTTGCGGCGCGAGGTTTAGGGGAGCATGTGTGTGTGAGAGAGAGATGGGGAGGGGGGAATCTGCAGGATGAAAACCCTAGGGTCCTCAGGCTAGGACAGGGGGAGGGCGAGGGTTCCACTTGCTGATGATCGGGGACTACCCTTGAGCCCCGAGGGCTGGGGAGTGCAGCGGGTTTGCAGTGAGAGGGGGAAAAGGTAGGGGCGTCCCTCCTTCCCGCGCCACAGCCCCCCTAACTGTTGCCGGACGTGCAGTCTCGATCACTTGCCCGGGCACTGCAGCACGTTGGGCCACCCCAGCCAGGGCGTCAGGCGAGGGAACGGTGCGGAACCCGGGGCCACTCCTTCACCGGCATGCACGCCTCTTAAGAGCTGCGGAGCAACAGCCCCCTCGCCCCACGCCTACGTCTCCCTGATTGTCCTACTGAGAGTGGGATGCCAACCACCCGCCAAATAACTGTGGGGACACCCACTATGGAGAGAAAAGGTTTGATGGCTAGCTGAGCCAGTGCAGCAGGGCTTGGTGAGAACCCCGGCGCCTGAGCCCCAGCACAGACAAAGCAAAGGCGGATCACTGATGCGCGACACCGAGCATCTTCTGTGCCTGACTGCAGCGGAGGATGGAGAGGGGCTGGCGCGGGCTGATTCACACCGTCAGTCACACGCTGGCTGGGAAATTATTAACAATGAGAACTCGGGCTGAATAATAGTTGCTTGAGGACAGTACTGGAGTTTTGCTCTAGTTAGGTATAATATTTATTTGCTAATAAACCAATAAAAACTACGTTTTGTGTCTCACAAATT TCONS_00012340 TCONS_00012341 TCONS_00012342 TCONS_00012343 TCONS_00012344 TCONS_00012345 r 5' 7 TCONS_00012348 r 5' 0 EMBV3_12019 GATGGCAAGAGTGAACATCAACATTTTAGGAATCAGTGAACTAAAATGGAAGCGACAGGG Gene BVV0101_017113 + 0 NULL GK000030.2:41212047-41441036 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16599 GAAAGTCTGCATTGTAGGCTCTGGCAACTGGTAGCAAGAACCAGGCTCATGGACAGCTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38287 TGGCTGCCATGGTGGAAGTCAGCCAAGATTTAAAGGGACGCCAGCGATTGCTCTTTTGAA Gene GeneID:512873|DTX1:XM_002694514:421_cdna Constitutive 0 NULL GeneID:512873 17 GENE DTX1 NULL deltex homolog 1 (Drosophila) EMBV3_38032 TGCTGGGGTCTCCTGCCCGCGCCGAGGAGAGACCTTATGGATTTTCTCAACCCAAACGGT Variant GeneID:523911|TXNDC15:XM_002689199:80_cdna 233^720 1 EMBV3_21791 GeneID:523911 7 GENE TXNDC15 NULL thioredoxin domain containing 15 EMBV3_26510 AGGCCCCGTGGCCTTTGAAGCTGAACTCCTGCCATCTACTCAGTCACCAACAGCTGGTGA Gene BVT0102_252540 + 0 NULL GK000007.2:5727368-5729333 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07166 CTCATCAAGTGCCAATTCAGTGGAGCAGGAGGAGGGGATGTTACGCATTTAGGGGAAGGA Gene GeneID:407220|SMEK1:XM_002696814:585_cdna Constitutive 0 NULL GeneID:407220 21 GENE SMEK1 NULL SMEK homolog 1, suppressor of mek1 (Dictyostelium) EMBV3_27346 CGACTCCAACTCGGTGCCGAGATCCGCTCTCTCCATTTTCCCTCTAAATATTCTCATCAC Gene GeneID:783300|LOC783300:XM_002699990:86_cdna Constitutive 1 NULL GeneID:783300 X GENE LOC783300 NULL hypothetical LOC783300 EMBV3_10493 CACCCTATTGGTAGACTTAACATCCTGCTAGGACCCAGGGCAGTAGTATCGTAATGGTAC Gene GeneID:281198|GLRB:NM_174071:87_cdna Constitutive 0 NULL GeneID:281198 17 GENE GLRB NULL glycine receptor, beta EMBV3_23822 CGAGTTGCAGACATCACCCAGAAATGTCTGATTCTGGGGCTTTTTAAAGTACTGCTGTCC Gene GeneID:529462|LOC529462:XR_084535:10_cdna Constitutive 0 NULL GeneID:529462 6 PSEUDO LOC529462 NULL similar to ubiquitin specific protease 53 EMBV3_40606 ACACCATTGTCCACTAGGGGGTATCAGTTCTTAGAGGGTTTTGATAATGATGCTTCGTCC Gene GeneID:536121|RSPO2:XM_002692748:73_cdna Constitutive 0 NULL GeneID:536121 14 GENE RSPO2 NULL R-spondin 2 homolog (Xenopus laevis) EMBV3_00284 TCAGAGACACCGATATGACCATCACCAGAGATGTATGAAAACTTCGTGGAGGAAGTAGAT Variant GeneID:506560|C12orf10:NM_001035038:18_cdna 330^489 4 EMBV3_23471 GeneID:506560 5 GENE C12orf10 MGC134440 MYG1 protein EMBV3_31017 TGGTCCACCGTTAACAGAGCTGAGTAGGCAATATAGGAGCAGAGTAGACAGGACCGTGGT Gene GeneID:523460|CHST13:NM_001102079:32_cdna Constitutive 0 NULL GeneID:523460 22 GENE CHST13 MGC157264 carbohydrate (chondroitin 4) sulfotransferase 13 EMBV3_39892 AGGCATTGCTGGGGAATTGACCTTGGCTATGGACCACCAGGCAACTAAGAGACTTAGAGA Gene GeneID:539786|SLC6A7:NM_001102231:73_cdna Constitutive 0 NULL GeneID:539786 7 GENE SLC6A7 MGC152023 solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 EMBV3_15618 CAAGAACCCGTTGGATAGTTTGTTCATCATTTGTTCTTTGAATGGTGGATGGGGCAGAGG Gene GeneID:506045|ATAD1:XM_002698369:155_cdna UTR3_Alt 4 NULL GeneID:506045 26 GENE ATAD1 NULL ATPase family, AAA domain containing 1 EMBV3_43721 TGCACTTCAGTGTCTCAAACCCCGGATGCGACATACAGTAGGATGCAGTGTGCTCCAGAA Gene GeneID:529500|AHRR:NM_001077982:32_cdna Constitutive 0 NULL GeneID:529500 20 GENE AHRR NULL aryl-hydrocarbon receptor repressor EMBV3_04212 GGCTGATCTGGAGCATACTAACCCTGATCACCTTGCTGCGATATTATTGAGATGTCACTC Gene BVT0102_146120 + 0 NULL GK000015.2:34964033-34990956 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00058921 TCONS_00058925 TCONS_00058926 TCONS_00058923 1 XLOC_036226 Coding TCONS_00058921 XLOC_036226 Coding Coding SAAL1 15:34940340-34968546 = TSS44296 6180 1 TCONS_00058921_4 473 0.269093851132686 12 0.781315369615316 0.00057392355292211 0.000951802662074269 9.12079848956794e-10 9.83703710947027e-05 0.000942030962710934 0.000409268122967244 0.000228756006642544 0.000451745544284505 0.000429538829349068 1.32679914027361e-11 0.000121444498459196 7.94907802753636e-11 6.50417717054636e-07 3.39377640229877e-05 0.000212042054748581 2.60542311044715e-07 6.79981943948478e-10 0.00192888476950585 0.000298830405298126 0.000532214875953434 0.00026801624626324 0.000612255284411741 0.000455978418491756 2.33258353322416e-09 3.52505112125852e-07 0.000242404579235855 0.000274436738332581 4.46991127910394e-05 7.10206868385991e-05 9.63526823521464e-11 NM_001205561.1 SAAL1 Bos taurus serum amyloid A-like 1 (SAAL1), mRNA. 0.0 2890 100.00 0.259061488673139 NM_138421.2 SAAL1 Homo sapiens serum amyloid A-like 1 (SAAL1), mRNA. 0.0 1966 89.07 0.242880258899676 TCONS_00058921_4 sp|Q96ER3|SAAL1_HUMAN SAAL1_HUMAN Protein SAAL1; 0.0 884 90.72 0.997885835095137 0 coding 0 0 0 0 0.0812780954918778 0.575374302256158 0.033115746208408 0.554676645065497 GGTAGTCTCTCGCCTCCTCCCGCGGCTTCCGGAGGAGCTCCCGCGCGCCAGAGGCGGCCGAATCATGGACCGCAACCCGTCGCCACCGCCGCCGAGTCGGGACGAGGACGAGGAGGCCGCGGCCGGGGGGGACTGCATAGGTAGCACGGTCTACAGCAAGCACTGGCTCTTCGGCGTCCTCAGCGGGCTCATCCAGATGGTTAGCCCTGAAAATGCCAAATCCAGCTCGGATGACGAGGAGCAGCAGATGGAGCTTGATGAAGAAATGGAGAATGAAATTTGCAGAGTATGGGATATGTCCATGGATGAGGATGTGGCTTTGTTTCTCCAAGAATTTAATGCTCCTGACATATTTATGGGAGTACTGGCCAAATCCAAATGTCCTCGATTAAGAGAAATCTGTGTGGGAATATTAGGTAATATGGCCTGTTTCCAGGAGATATGTGTGTCCATCAGCAGTGATAAAAATCTTGGCCAGGTATTGCTGCACTGTTTGTATGATTCAGACCCTCCTACTCTGCTGGAAACAAGCAGGTTGTTGCTTACTTGCCTTTCCCAGACAGAAGTGGCCAGTGTCTGGGTTGAAAGAATTCGAGAAAATCCAGCTATTTATGATAGTATTTGCTTTATCATGTCAAGTTCAACAAATGTTGACTTGCTGGTAAAGGTTGGGGAGGTTGTGGACAAGCTGTTTGATTTGGATGAGAAGCTAATGTTGGAATGGATTAAAAGTGGGGCTGTTCAGGCTCTGGACCAACCCCAGGAAGATTCTGAACAACAGCCAGTGTTTCGAATTGTGCCGTGTGTTCTTGAAGCTGCCAAACAAGTGCGCTCTGAAAATCCAGAAGGGCTTGATGTTTACATGCATATCTTACAGCTGCTCACCACAGTAGACGATGGAATTCAAGCAATTGTACAGTGTCCAGATACTGGGAAAGACACTTGGAATTTACTTTTTGACCTGGTGTGCCACGAATTCTGCCAGTCTGATGATCCGCCCATAATACTGCAGGAACAGAAAACAGTGCTGGCCTCTGTTTTCTCAGTGTTGTCTGCCATCTATGCTTCACAGACTGAACAAGAGTACCTAAAGATAGGAAAAGTGGATCTTCCTCTAATAGACAGCCTGATTCGTGTCTTACAAAATATGGAACATTGTCAGAAGAAACCAGAGAACTCAGTGGAGTCTAACACAGAAGAAACTAAAAAGTCTGATTTAACGCAAGAGGATTTCCACTTGAAAATCTTGAAGGATATTTCATGTGAATTTCTTTCTAATATTTTCCAAGTGTTAACAAAGGAGACTATAACTCAGGGACTAAAGGAGGGCCAGTTAAGCAAACAGAAGTGTTCCTGTGCATTTGAAAATCTTCTTCCTTTCTATAGCCCTGTGGTGGAAGACTTTCTCAAAATCCTCCGTGAAGTTGATAAGACTCTTGCTGGTAACCTGGAGGAAGGCTTCCCAAGTTTGAAGATTCAGACTTAAAAACTATTAGAATCCTCTGCCCAAGAAATGGACTCGCTGACTGTTGAAATTGACAAATAGGAAATATTACACCATAATTGTTTGGTATCATACTCATGCCCTTCTCCTCCAGCCTTATCTCATTTTTGTTTGGCACTGAAATATTTTCACTACCATCAAACATCATCTCCCTCCCCTCCTTTTTTTTTGGTATGTGTGTGTGTTGGTTGTATAGTATTTGTCTTCAGGTAAAGAAAACAAAATTATCATAGAGGTCCTTTTTAGAATATTTGAGGGGTCACTGAGGATTTTCTTCATAACTCAATTTGATTTTTACTCAGAATTTTGTATTCATATCTACTGCAAGTGCATTCAGCTGCACTAGTAGAAAACCCTACTACAGTAGCTTAATCTGTTAACTTGTATGTATTTTATGCAATAAGAAGTCCAGAGGTGTGCAGTCCAGCCCTGATAAGGTGGCTCAGGGACCCTGACTCCCTTTATCTCTACGTGATCTGCCGGGTAGACCTTTGTGTTCATTATTGTTGTCTTTTGGTTAAAGGGACTATAATATCTCTGGTCCTTTCTTCCACATTCATGGAAGAAAAAAGAGAAAGAGGCCAAGGGGCTTTCTCATAACAAAACTTTACTTTTTATTTGGAAAAGATAGCCCTCCCTGGCCAGAACCATGTCTTATGTCTGTCCCTAATTGCAGGTATTTGAAATCAAGTACTTTTTTTCTTTCTGGCCTCTCCAGGAGAGAAAGGCAAGAGAGAAGGGAGATAGGAATGGCTTTTGAGTATACCCAGTTCATGGTGTTTGCCACAATATGCAAACCTTTCTATCCATTTTAATTGTATTGATTCCATGCTAGGTTGTTAGTAACAATCAAAAGCAACTACTAGTTTAGCTTTGTTACAGTTCAGTTTTTTTCCAGTGTTTTACGTATGAAGATGAAAATGCTAACATTCTGATGAAAGCACATTAGCAGAATTCTCTGGTTTAATTTCAGAAAATGATTTTCTTGAGTGACCTCAGATTTTTAAAGTTAAGACTGAGGAAGTTTCATAACTTCTGGTTGTTTACAGACTGTTGTACGTGATTTTCCTCTCACACTATCATTCAGTATAGTGCTTCCTAATGAGACGTATTCTGGGAATCAACCAGGTACACTTATAGGAAGTACCCAGTTTGTATTGTTTCAGTTACTGAAAGTGGACTTTTAGTAGATTTTCAGAAAATAGCAGTTATGAATGAAAAAGCCAGCTGTTTAAGCCTCTCTTCTGGTATACCTTCTTCTCAGTCTATTGTAGAATCTTTAAAATTTTTAATCTTTAAAGCATTAGTCTTGCCTTTTGTATTCTTTCCTTGAATGATTTTTGCTGATAAAACACAGGGTTTTCCTGTGCTGTTTGTAAGAGATATATAATTTCCAGTTTGGGGGTAATTTTAGTGTTGAAAGTACCCTGCCAAAAAGAATTGAACTATGAAATTAAAATCTTATCGATTAAACTCTAGTTGGTAGGTTTGCTTTATGTATATTTGTATGTCTTTGGTGGTGACCTGTCCGCCAAGTGGAATATGACTTTAACGTGAGATTTCAAAGGCACCTATGTAATCACTCCTACCTGCTAGCCAGTGCTAAAAATTCTACTTCTGTTATCTCTTAAAGTTTAAGGTTAAAGATGCAAATAAGCCTATTAGAGTAATACTCCAAGTTACTGTCATGTTTAACGTCAGTGTGTAAATTCACATTCTCTTTTCCTGAGGGCACATTTTAAAAGGGGGAGCACAGGAACCTTGGGTGTCTGAACAAAAGAGTGCCATTCAGAGTGGCCAGGTTACAGAGGGAGAAAAAGGATACATCAGGGGGAGGCTCGGGATGTCCAGGTTATTTTCTACTTCCATTTCTGCCTTGAACCTGCCTTATTGATGCTTCTTGCTATTGTAACATTATGAAGTGGTGCATATTTTCATTGTACTTCGATATGTTTGAAAACTTCCTAAATCTGTAAATTATAACAAATAGTTTTTTTTTAAGTGAGCAATGTTAAAACTTCTTTTTTTTTTAATGGTACACAGTTTGAAGAATTTACTAAAAATTAACGCTTGTATCAATTACAGTGATATTTTAAAATGGTGCTTTCTGCAGAAGCAGGTTCAGGAGTGCTGGACTCTGAAAATCATGTAACTTGCAAGGCTGAAGACCCTATTTGGGGCAGCCAGTCATATTTATTGTCTACTATGTATCAGGTGTTGTTCTAAGTATTAGGAAGACAGCAGCCAACTAAACAGACAGGATATGCATACTGGAAATTTTGTAGTGGACAAAGAGACATGAATCTGGCCAAGTGGAGCTCACATTCTAGAGTCTTCTGTAGAGTAACGGGAAGAACTTGGCCTGCACAGAAGAACAGAAGAGGTCACTCAGCCTGGAGGAGAACAGATCATTGTTCTCAGTTCTTCACCTCTCTTGCCATGGCTTCTTGGTGACTGGAGTGTATTTCCCTGCCCTTTGATTTTGAGCTTGGCCAAGTCATTTTGCTTCAGCCAATTGAACATTAGTTAAGTTAATATAAGCAGTCTAAATACACTAGTCTTTTTAAAGGCTGAATAGTACTCCACTGTGTGTATATGCCATGTTCTCTTCCCCTGTCAGTGGGCATTTAGGTCGCTTCTGGGTCTTGGCTTTGTGAAGAGTGCTGCAGTGAACACGAGAGTGAAGCTCTCTCTTCGAGACCCTGCTTTCAGTTCCTTTGGTTAGATACCCAGAAGTGAGATTGCGGAAGTGTAAGTAACTTAGCTAAGAGAACGGTTAAGTCATCCCCTCCCCCAACTCTTTTTTCCTAAAATAATGATTTTTTTCCATCTTTGTCAGGATAAGGCTGATCTGGAGCATACTAACCCTGATCACCTTGCTGCGATATTATTGAGATGTCACTCTCAGTTTACATTGCTACCAACAGTGTACAAGCGTTCCTTTTTCTCCACATGCTCAGTAACACTTATCTTTAGTTACCAACACTTGTGTATGTAGATAGTAGCCCCCTAACTGGTGTGAAGTGATCATCTCATTTTGGTTTTGATTTGTGTTTCCCTGGTGATCAGTGGTGTTGAGCACTTTTTCATATATGTGTCAGCCATTCACATCTTCATTGGTGACATGTCTCTTCAGTTCCTTGGCCAAATTTTTAATCAGCTTGTTTGTGAAGCTTTTTTGTTAGTGAGTTGCAGATTTTCCATTATATTTGAATATTAACTCTATCAGATATATGGCTTGGAAATATTTTTTCCCATTCCATAGGCTGCCTTTTCATTTTGTTGATTGCTTCCTTTGCTATGCAGAATAGTTTCCTTTGCTATGCAGAATAGTTTGAGGTAGGCCCACTTGGCTGTTTTTGGCTGTGCTCTTGGTATCATATCCAAGAAATGATTGCAAAGACTATTATCAAGAAACTTCTCTCCGTGTTTTCTTCTCAAGAGTTTTTACAGTCTAAGTTTTACATTTATGTTTTTATCCATTTTGAGTTAATTTTTATGTATGATGTAAGAGAGAGGTACATATTCATTCTTACACGCATGAACATCCAGTTTTCCCCAGCATTACTTATTGAAGAGACTGTCCTTCCCCCACGGTATATTCTTGCTGCCTTTGTCAAAGGTTGGTTGTGTGTGTATGGGTTTCTTTCTGGGCTCTGTTCTATTTCTTTGGTCTATATGTCTGTTCTTAAAACAGTCCCACTTATGGTAGCATCAAAAAGGTGGTGAAAGACTTACACACTAAAAAATTATAAAACACAGACAGAAGAAATTAAGGCAGACACAAATGAAAAGATATCCGTGATCATGAATTGTAGGAATTAATATTGTTAAATTGGCCATACTATCCAACATAATCTTCAGGCTCATTGTAGCACCTATCAAAATCCTAATTTTTTTACAGAAATAGAAAAAAAAACCCTAGAGTTTGTGTGGAAGCATAAAAGACACCTAATAGCCAAAGCAGTTTTGAGCCAAAAAAACAAACCCAAAGCTAGAGATGTCATGCTTCATGATTTCAAAATATATTGCAAAGCCCTTTAGGTTTTCTTGAATGAGATTTGAAAAGTCTTAAATATCTGATACTTCTGCAACCACATTTATTTTTCACTAGGACTATATTAAGTGAAATATACCATATTTGAAACTTCACTGCAAATATGATTTGTACTAGAACATCAAGAGCTCTTTAGCGGCAGTCTTAACTATGTGCCTCTTGCTGCCTCTAAATAGGTTTCCTTGTGAAATGATTTTAAATTAACTTTTAAACACCAGGTTCCGTGTTCCACTGCTAAGGCTACAGCATGTATTTATAAAAACATTTCTGCTCACTAGGACACCTAGTTAATTACATACTGAGCTTGTATCAATATTGGGCTTGGTGACCTGCAGGCTGTTTAGAAGTGGGAGGCTTAGGAGACCATCTGCCAATCTCTGCCATTGGAAATGCTTTTCTCTATTACTGTAATGAAATCACTAAAATCATTTCCTGTTTCCAGTCCTTGTTCAGTTCTTCTATCTATTGTCAATAAGAGGATATTAAAATACTCAGGAAAGTCCACATGTCCTTTTCATTCTGGTCCATAATGTGGCAAGTGTCTTTGTGTTTTAGTATTGGAAATAATAAATAATGACGTCAAGTCTATTGTAATAAAAGAAGCCTGCTTATTAAACTC EMBV3_40814 GCAAAGGACTGGGTAGCTTTGGAGATCTGAGCACTGAAGCCCGAATATGCTTAAAACGCG Gene BVV0102_348533 + 0 NULL GK000024.2:11214012-12192476 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139778 TCONS_00139788 TCONS_00139785 TCONS_00138542 2 XLOC_084985 XLOC_084667 Coding TCONS_00138542 XLOC_084667 NonCoding NonCoding - 24:11226503-11233598 - TSS103786 816 2 TCONS_00138542_2 48 4 0.88553707358331 0.000592516623172552 0 4.37844239135666e-193 1.60181559103607e-59 0 8.76727971519163e-06 0.00018282150686869 2.17453441248883e-05 0 0 0 0 0 0 2.32238328173419e-114 0 0 0 5.45101986132854e-05 0 2.28830680686054e-05 0 0 0 0.000223206374159612 7.61862704063802e-05 0.00682413780399471 0 0 0 0 noncoding CCATACTGTCCCAAAGAGCCCCAAAAGGAAGAAAAGGATTCTTAATGGATTGCCCTTTATGTACTAACAAGAGAACAGCTTGTGTAAACAAAATCTAACTAGTTCTTCTTCAAAGAAGTAAATCTGTTCTGCTTGTCTACTTTTGAATGCAAAATAATCTGAATACCTGCCGGGTTACAGGAATTATGAAGGAAGAGTCTTTACTTAAAGATGTTTCACCTAATAAGTGCTGCAATCAAGAGAAGATATTTCTTGCGAACGCGTTTTAAGTATATTCGGGCTTCAGTGCTCAGATCTCCAAAGCTACCCAGTCCTTTGCTTCACAGGTTCTCACCTGCCCACTGCTGGGTAATTTAGTACCAATCTCCACTCACCTGCACTATATCTAAGAAATCCTTGAGGTTAACGATGTAAAAGGTGAAGCCAATAAAGACCATAGGTCCTTCCTCGTGCATCCACCCGCAACCAGCCGTGGACCAGGTGCGCCCACAAAGTCCACCAGACAGTCAGAGAAGCAGGGCGCCCTTAGAACGACGCGCACCTAGGGTACCGCGGGGCGGAGCGGAGGCGGGATGTCTCGCAGAGGCCAGCCCTGCGGATGCAGGGCACCACCAGAATACTAATTACAGGAAAAAGCTAAACACCCTTACAGGAGCTCCACCGTCCAGAAAGTCTAGAGGTTGAGAACACAAAGGTGAAGGCGCAGTTCTTATCTTCAGGAACCTTCCAGCCTGTTGTGAAAATAAGAAGGTGGACATCTCCCTGCACCACGATGAGCATCGTGACGAGGGTGAGGAGAGAAGGAGAAGGGGTGAC TCONS_00139788 r 5' 0 TCONS_00139785 TCONS_00139788 TCONS_00139778 r 3' 515 EMBV3_32776 CGGGTCGAACGTCAGTCGAAGGAGTTTTGTTTCAGTTTTCTCCATCAGCTAAACTGCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26363 ATCCAAGCTGAATTCGTAGGAGGCGTGCTCGTTTGCAACAATCAAGTGGCAGTCCGTAGA Gene GeneID:327689|CPSF2:NM_175808:139_cdna UTR3_Alt 3 NULL GeneID:327689 21 GENE CPSF2 NULL cleavage and polyadenylation specific factor 2, 100kDa EMBV3_13508 ACAATGCAGAAGTTAGGACCTGGGGTTTGGTTCCTCCACCTGATGCCTTCACCACCTACA Gene BVV0102_084414 + 1 EMBV3_02761 GK000007.2:17885418-17886792 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00212179 TCONS_00212180 TCONS_00212176 TCONS_00212182 TCONS_00212177 TCONS_00212178 1 XLOC_130107 Coding TCONS_00212182 XLOC_130107 Coding Coding LRRC8E 7:17880795-17886631 j TSS159275 4779 1 TCONS_00212182_6 796 0.0860012554927809 3 0.181491002570694 6.82131849001272e-16 0.00025212676961158 0.00143837797469455 9.8433742333502e-06 0.000450040235007665 0.000463304633897759 0.00145774376091948 0.00130405883623183 0.000681717352143775 7.79489553666673e-05 3.9736776091291e-10 0.000149112027496253 6.06516376516829e-60 7.00368892886116e-05 3.64019675464854e-17 0.000908221983428349 6.45980335553979e-05 0.000112665335057534 0.00284198986373473 0.000822122413402504 0.000197387438941925 2.88306584598016e-05 0.000147374962770071 0.000784990658840907 0.00108085336938464 0.000741924545438119 0.000292046499122487 0.00034164964437959 2.04377676833375e-05 4.56415100680783e-06 XM_005208732.1 LRRC8E PREDICTED: Bos taurus leucine rich repeat containing 8 family, member E (LRRC8E), transcript variant X2, mRNA. 0.0 6432 100.00 0.745971960661226 NM_001268284.1 LRRC8E Homo sapiens leucine rich repeat containing 8 family, member E (LRRC8E), transcript variant 2, mRNA. 0.0 3034 83.78 0.591964846202134 TCONS_00212182_6 sp|Q6NSJ5|LRC8E_HUMAN LRC8E_HUMAN Leucine-rich repeat-containing protein 8E; 0.0 1511 92.59 0.998743718592965 5 coding 1 1 1 1 0.0558888302059369 0.719952055781394 0.0376729514126256 0.445275873293021 GTTTGGGACTGGCGTCAAGGGTGGGAGATGCCTGGGCTCGGGAAAAAGGCCACACCGACGAGTGGTGGAGCAGCGGCCTCGTGGAATGCCCCTCCTGAACTCTGAGTGGGCAAGCCCAGTCCCATCGGGGCAGGGGTCCCTGGGAACAGAGGTGGAAGGATGATTCCGGTGGCGGAGTTCAAGCAGTTCACGGAGCAGCAACCCGCCTTCAAGGTGCTCAAACCTTGGTGGGACGTGCTGGCCGAGTACCTCACCGTGGCCATGCTCATGATCGGGGTCTTCGGCTGCACCCTCCAGGTGACGCAGGACAAGATCATCTGTCTGCCCAGTCATGAACCCCGGGAGAATTTATCTGAAGCCCCATGCCAACAGCTGCTGCCGCGGGGGATCTCAGAGCCCATGGGGGACCTTCGGGAGTTGAGCGGCCTCAAGAACAACCTGGACCTACAGCAGTACAGCTTCATCAACCAGCTCTGCTACGAGACGGCCCTCCACTGGTATGCCAAGTACTTTCCCTACTTGGTTGTCATCCACACGCTCATCTTCATGGTCTGCACCAGCTTCTGGTTCAAGTTCCCCGGCACCAGCTCCAAGATCGAGCACTTCATCTCCATTCTGGGCAAGTGTTTTGACTCGCCATGGACTACTCGGGCGCTGTCCGAGGTCTCCGGGGAGAACCACAAGGGCCCTGCTGCCACCACAGCTGGGCGGGCGACAGTGACCGTGACCACAACTGCAGGGCCGGGGAAGGCAGGGGAGGGTGAGAAGGAGAAGGTATTGCCAGAGCCCGAGAAGGTGGTGACAGAGCCCCCTGCTGTCACCCTGCTGGACAAGAAGGAGGGAGAGCAGGCCAAAGCCCTGTTTGAAAAGGTCAAGAAATTCCGCGTGCACGTGGAGGAGGGCGACATCCTGTACACCATGTACATCCGGCAGACGGTGCTCAAGGTCTGCAAATTCTTGGCCATCCTGGTCTACAACCTGGTCTACGTGGGAAAGATCAGCTTCCTGGTGGCCTGCAGGGTGGAGACCTCGGAGGTGACGGGCTACGCCAGCTTCTGCTGCAACCACACCAAGGCCCACCTCTTCTCCAAGCTGGCTTTCTGCTACATCTCCTTCGTGTGCGTCTACGGGATCACCTGTCTCTATACCCTCTACTGGCTCTTCCACCGGCCCCTCAAGGAGTACTCCTTCCGGTCAGTGCGGGAGGAAACTGGCATGGGCGACATCCCCGATGTCAAGAACGACTTCGCCTTTATGCTGCACCTCATCGACCAGTACGACTCGCTCTACTCCAAGCGCTTTGCTGTCTTCCTCTCTGAGGTCAGCGAGAGCCGCCTGAAGCAGCTCAACCTCAACCACGAGTGGACTGCCGAGAAGCTGCGACAGAAGCTGCAGCGCAACGCCCGGGGCCGGCTGGAACTGGCCCTCTGCATGCTCCCGGGGCTGCCGGACACGGTCTTCGAGCTCAGCGAGGTGGAGGCGCTGCGGCTGGAGGCCATTGGCGACATCACCTTCCCCCCGGGCCTCTCGCAGCTGGTGCACTTGCAGGAGCTGAGCCTGCTCCACTCGCCCGCCAGGCTTCCGTTCTCCTCGCAGATCTTCCTGCGGGACCGCCTGAAGGTCATCCGAATCAAGTGCGAGGAGCTGCGGGAGGTGCCCCTCTGGGTGTTTGGGTTGCGTGGTCTGGAGGAGCTGCATCTAGAGGGGCTCTTTCCCCCAGAGCTGGCCCGGGCGGCCACCCTCGAGAGCCTCCGGGAGCTGAAGCAGCTGAAGGTGCTGTCTCTGCGGAGCAACGCTGGCAAGGTTCCCGCCAGTGTGACTGATGTGGCCGGCCACCTGCAGCGGCTCAGCCTGCACAACGACGGGGCACGTCTGTTGGCACTGAACAGCCTCAAGAAGCTGGCAGCGCTGCGGGAGCTGGAGCTGGTGGCCTGCGGACTGGAGCGCATCCCCCACGCTGTCTTCAGCCTAGGTGCGCTGCAGGAGCTTGACCTCCGGGACAACCACCTGCGTTCCATCGAGGAGATCCTCAGCTTCCAGCACTGCCGCAAGCTGCTCACACTCCGACTGTGGCACAACCAGATTGCCTATGTCCCCGAGCATGTGCGGAAGCTCCGGGGCCTCGAGCAGCTCTATCTGAGCCACAACAAGCTGGAGACGCTGCCCACCCAGCTCGGCATGTGCTCCAGCCTCCGCCTGCTGGACGTCTCGCACAATGGGCTGCATTCCCTGCCAGCCGAGCTGGGTCTCCTGCAGAATCTTCAGCACTTGGCTCTCTCCTACAATGCCCTGGAGTTTCTACCCGATGAGCTCTTCTTCTGCCGCAAGCTGCGGACGCTGCTCCTAGGTTACAACCACCTGAGCCAGCTTGCGCCCCAGGTGGGGGCCCTCAGGGCCCTCAGCCGCCTGGAGCTCAAGGGCAACCGGCTGGAAGCACTGCCGGAAGAGCTCGGCAACTGTGGGGGGCTCAAGAAGTCGGGGCTCCTGGTGGAGGACACCCTTTATGATGGGCTTCCGGCCGAGGTACGGGACCGGATGGAGGCAGAGTGAAGCCGGGGAGGGAGGACAGGTTGAGGTCAAAGCCTCCTGGATGCTACCGCCCCAGAATCTCTACCATTATCTTCGAGGGAGGTGGCCAAGTGGGCCCCAGCCAGGAGACAAGGAACAAACATGTCAGTTTGATGGAGCCCAGGCAAGATCCTGGGACTGGTTTGTCTGGGAGGCTGTGGATTTGGGGTGGAACATCCTGGAGAGATTAACTCAGTCAGAAGACTCTCAGACCAAAACCACACCTGTGTTTTTGGCTTGGCTGACCTGCCCCTAGCCCTGGGCCAGAGATGCTGCCATCCCCCAGACAGCAGCCACAGTACCGCAGATGGGGGGTGGGGTGGGGGAGGCTCATCCTAGTGGGATTTCAACCCTCTCCCCTGACCAAAACAGCTTACATCTGGGGTTTTCTCCCAACGAGGGGACACAGACACAAGGGACCAACCTCCCCCGCCAATTTTGATATTAATCCCCTATTTATAAGTTGCTTGCTATGGACACCTGAACTCAGAAAGCAATGGTTCTCATATTTGGCTGAAATCAACATCTCCAAAACAAAACATCCGAGGCCCCACCCTTGAAAGGCTGACTCAGGATGTTGGCTGGAGGCCAGGAACTTGCTGGTAAACAGAATCACCCCAGGTAATTCTGATTTGGACCATCCCAGGCCTGAATGTTGGGAAATGCTGACCTACAGAGTAGATATCTGGGTGTTAAGAGCAGGGATTCTGAACTTGGTTTTAGATCTCTAGATTCTTTGAGAAATCTGATGAAAGGTGGGCACCTCCTTCCTTAGGAAAATGCTCATGTTCACATAAGTTAAAAGCTCTGCAGACAACTTCAAGCAATCAACATTCCCCCAGACCCCCCAGGGGGCTATTCATGGATGTGCTAAGGATTGGAACACCTGCAGGGCAGGTACATTTTTCTGTAGGCTGGGACTTTGTCTTTCAATGTTCCCTATGTGAGGGAGTGTTTATCAGTGGGTGCTTAATAAATAACACTATGAGAACCATATATATATTTTTTGGCTGAGCTGGGCCTTCCTCGTTGCACTCAGGCTTTCTCGAGCTGTGGTGCATGGGTTTCTCATTGTGGTCACTTCTCTTTTGCAGAGCACAGGCTCAGTAGTTGCGGCACAAGGGCTTAGTGGCTCCGTGGCATGTGGAATCTCCCCAGACAGGAATCGAACCCAAGTCCCCTGCTTTGGCAGGTGGATTCTTAACCACTGGGCCATCAGGGAAGTCTGAGAATAAGTTTGATCCCTTGTGTCCACTCCTGCCGTTGTCTAAGGCTTCTATTTCACCAGACCAAGTACAGGCAAGTGGCAAGAGTCAGGTTCCAGAATCAAGGCTATAAGCCTCTTCCCTGGGAGCAGAGGCAGAGAGAGACCTTAGTTAACCAGGAGACATCAGGTGGTCGTCTACATAGCCTTTTCCCGTAGAAGTGCCTGTCCTTTACATTCCGTTATTCTCATGGCTCCACAGTTTTGGATCTGCTTCACCTGTAAGTTGTCACCAGGAGAGTCATCAGAAACCTTCAACACCAATCAGTTTTCTCGTGCTAGAGTGGGCAGGGCCTTGGCACAGCCTGCCCAACCCTGACCTCCTGGGCTTCACCACCTCCATGGTGTCTCCAACATGTGAGCCTCCTCCAGGCACCAGAGAGCAGAAGCAAGCTGCTTACCTGGGCGCCCCAGGGTTCCAGATGGGGACATTTTCCCAGCACTCTTCAGGCCAGCTGAAGAAAATGTGTAGGTGGTGAAGGCATCAGGTGGAGGAACCAAACCCCAGGTCCTAACTTCTGCATTGTCCAGGAGCTAAACAGATGAGGGATGCCTTCAAATTTCCCACAGCCAATCTGACTTGGAACTCTCTATCCTTGACCTTGGCCCCACGTCGCTGAGGGCAGGGATCACGCCGCTAGATTCTCACCGTCCAGACAGTGGCCCAAACCCTACCCCGCCCATCCTTCAAGTCCTCGTGGCCAACCCTGACCCCGCTGAAATGGAAAGGGCTTCCCACAGGTGCCTAATTATGGTGAGTAGGCAGCAATTAAGCACTACAGGGACCGTAACGAAGCACTGTCCGAGATGAGAAAGGCAGTTTTGGAAGGCGTGGGTGCCAGCTAGGGCCGGCCGGGAAGAGAAAGAACGAGGCTGAGGATACAGCCTGGCGACCACCGGGGACAGCGGCAGGAAATTTAAAAAAATAAAAAAAGAGCGAGAAACCA EMBV3_15942 CAGGGATGATTATTATGGATGATGTGGAGGTGCCTAAACAATGCCCGCTATGGCATCACA Variant GeneID:506310|GCDH:NM_001045939:29_cdna 904^956 1 EMBV3_32890 GeneID:506310 7 GENE GCDH MGC137369 glutaryl-Coenzyme A dehydrogenase EMBV3_25286 CCCGGGCAGCTCCCACTACGGACACCCCAGCATCCGGAGGGGTTTCCAGGTGTACAAGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14961 GAAGTCCCAGAAGTCGTATTCCTTTAAACCCTGCTTTGGTTCCCCTGTGGACATGACCCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12378 CCATCGCTCCCGGCTCGCCGGGTTGCTGCAGTCAGTGTCTCTCTCAAGTTTCCTGTCTCT Gene BVV0101_064508 + 0 NULL GK000006.2:66604689-66708708 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14436 GTCTTCTAACCCACAGTGCTGCATTACATGTAGGACGTGTTTACTAAAGTGCGTAAAGGT Gene GeneID:535440|HERC2:XM_002685191:22_cdna Constitutive 0 NULL GeneID:535440 2 GENE HERC2 NULL hect domain and RLD 2 EMBV3_05815 CCTTGTCAGCTCGGAAGCAGTTATGTAACGAGAACGACGCCCCTTTTCCGTAGGCAACAT Gene BVV0101_066948 + 1 EMBV3_18590 GK000025.2:257903-282553 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246740 TCONS_00250681 TCONS_00022895 TCONS_00030963 TCONS_00107436 TCONS_00253739 TCONS_00238581 TCONS_00129710 TCONS_00210913 TCONS_00174805 TCONS_00010280 TCONS_00188145 TCONS_00161822 TCONS_00125692 TCONS_00250203 TCONS_00031886 TCONS_00241019 TCONS_00110425 TCONS_00246739 TCONS_00211020 TCONS_00174809 TCONS_00174808 TCONS_00000529 TCONS_00238380 TCONS_00251851 TCONS_00174807 22 XLOC_151107 XLOC_153624 XLOC_013565 XLOC_017212 XLOC_063346 XLOC_156678 XLOC_145248 XLOC_078423 XLOC_129423 XLOC_104695 XLOC_005831 XLOC_114188 XLOC_098707 XLOC_077234 XLOC_153146 XLOC_018131 XLOC_147683 XLOC_066329 XLOC_129530 XLOC_000141 XLOC_145047 XLOC_154792 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_23578 ATGCACTCCCAGACGCACATTGGGTAAAGGACAAGGAAACTCGGTAGCAAACATTGGCTC Gene BVT0102_123319 + 0 NULL GK000007.2:1346052-1380600 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00122150 TCONS_00218473 2 XLOC_073705 XLOC_131793 NonCoding TCONS_00218473 XLOC_131793 NonCoding NonCoding - 7:1363254-1364225 - TSS162471 971 1 TCONS_00218473_4 91 0.884654994850669 1 0 0 3.10457133530536e-05 0 0 0 0 0 0 0 0 2.35755531614562e-06 0 0 0 0 0.000299204472532805 0.00381287607871398 0 5.27506577588104e-07 7.40621781390401e-06 0 0 0.00336350856065572 0.000172653204139697 0 1.03655525582259e-06 0 0 4.99959731141851e-06 0 XM_005196241.1 WDR73 PREDICTED: Bos taurus WD repeat domain 73 (WDR73), mRNA. 0.0 756 93.35 0.523171987641607 0 noncoding CTGCTTGTTTTTCTTGCATACCAACTATACTTGCTAATGCACTCCCAGGCGCACATTGGGTAAAGGACAAGGAAACTCGGTAGCAAACATTGGCTCAACAATGCAGTATTATTCTAATAAAGCTTTTTTTATCGCTCGAAGGTTATGTTTGGGATGTTGTGAACAATCAAGTGCATTAGTTGCAAGAGTGTGGATAAACCTGCCAAGCAAGCTAAAATAGTAACAGAGGGGTTAAAGTAAAAATGCTCCTTTCAAGCCCAAGAAACTTATTAACTAGAGCCCTAAGTCGATTTTCTTCAGAGAAAGGTGGTCGGGGATAGCCCCCTGTAAATGTCAGAAGAGTTGGTGAAAGGCATAATATAATAAACAGTAGACAGACAGATTTTAGTTTCGGGGTAGATGCTCGAGCAGGTCCAGGGAATCCCTCGAGTCCTGTTCCGCCTTTGCCTGTCAGGTCCTCTCCGCATGACCTTTGTCATGGGTGGGATCTCCCGAGGTGGCTCCCGGCACCCATACTTTTCTGTTTTGTGTTCCAGCTGGCAGAAGGGCTAGTTGAGAAAGGAGCTGGACTGGACAAAGTCCTCCAGAGGCCACCTTGCAATAATACCATGTCTTTGTTTCTTGTTTGTGCCTTTAAGTTTCTGTCATTGATACATGTTGACTCTCAGTCAGTGAATGTATCAGGATCTTTGTTTTATGTGCTTTTGTCTGTCCCATCACTCCTGCAAGTCTCCACCTCATTGTGTGTATGGGTTGAGCACTTTAAGCCTTAAAATACAAACACAGCCCATATTGCCTGAGACTCCAGCCTTAGGTTACTTCAGTTCAGTTCAGTTCAGTCGCTCAGTTGTGTCCAACTCTCTGCGATCCCATGAATCACAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATC TCONS_00211389 . 5' 6369 TCONS_00211389 . 5' 6369 EMBV3_04314 GCTCAGACGGCCCAGTTATAGGAAGAGCCTCAGAATCCATCAAGGCAGTTTACTTTGTCC Gene BVT0102_018403 - 0 NULL GK000022.2:46112684-46479695 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126963 1 XLOC_077532 NonCoding TCONS_00126963 XLOC_077532 NonCoding NonCoding - 22:46177485-46178452 - TSS95077 967 1 TCONS_00126963_1 71 0.263702171664943 1 0 0.000126629958710266 4.15653519049531e-05 0.000703995755056042 0.000309151283650406 0 0 0 7.87293405766093e-05 2.44782368236366e-05 0 0 0 0 0 3.5515384642162e-05 0 0 0 0.000348609882117761 0.000208231743505518 1.88359973889511e-05 0 0 0 0.000257936814600416 0.000521057125668224 9.16683077909716e-05 0 0 0 0 noncoding 0 0 0 0 AGCTGAACAATTGGAGCATGTGACTTACTACAAAATGCTCATCTGAAAAGTGAGATAGTAAGACCTCCCCAGCAAGCTGTTAAGAACAACAGAAGCACTTGGAATAGTAGGTTCTCAGCAGATACTTGCAAGGCTTGCTGCTTCTCAGGCAGTGTGCTCAACACTTTGTGTCGCTTGGCCTGACGAGGGTACCTTGTAATCATTCCCACTGGCAGGTGTCAGGTCCATGGCCCAAGGACGCAGAACCAGGAAGGTCCACACCCCACTCCACCTTATTCCAAAGGTTATGCTCTCACCTGCTTTCCATGTTGCCGCCAACAATAAATGCTTTCCAGTCTTCATTTTGCCACTTTCTGGTTGGGAAACTTTGGTTAAGCTGATTCCTTCTTCTGAGCCCCGGCTTCCTCCTGCATTAAAAGATAATATGAAGTCTGAGATGTGAGTGGAGAAGAATGTGCCCATGAGGTTGGACTCCCACTGAGATCCTGGCATGGCCTTCCTGCTCCTTCTTGGGGAGAATTTGACCAAGTCTGCATGGTTCCTGCCTCAGTTTCCCCCTTCCATAAGAACAAAGTAAACTGCCTTGATGGATTCTGAGGCTCTTCCTATAACTGGGCCGTCTGAGCTGCTTCTGGGGAATCTGAAGTCCAGAGAGGCTAGGAAAACAGCAGAGCACGGAACTGTCAGAGCTGACAAAGCAGCCAGGGCCCTTCCCTCACCAGCTTGCTGAGACTCAGTGTGGCAATCAGGATGAGCCCCCTCCGGGATGCCGTACCCAACTGAGAGGCCCCTCAAGTGTTGCAGAGTGGGGGCACTGGGATTCAGCCTGCCTGCCGCTGAGTTCTGGCTTTACTTCTTAGTTGCTGTGTATGTGACCCTGTAGGATGAGTCACTTACTCTCTCTAAACTTTGGTTTCTCCATGGGTAAAATGGGGTAGGAATGCCTCCTTCGTTGGGTCGCTGAGGG TCONS_00126960 s 3' 64803 TCONS_00126960 s 3' 64803 EMBV3_14150 CCCATGAGAAGGTCACTGTGTGGCTTACGCAAAGCTGAAACTCATGTAGAGCCTATAGAC Gene GeneID:767844|B3GALNT1:NM_001076963:167_cdna UTR3_Alt 1 NULL GeneID:767844 1 GENE B3GALNT1 MGC140658 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) EMBV3_16224 AACAAGGCCCCCGCGAACCACAGGACTCCTTTCATTTGAGACCAAACCTGTATTCCAACT Gene GeneID:540109|CRTC3:XM_002696570:180_cdna Constitutive 0 NULL GeneID:540109 21 GENE CRTC3 NULL CREB regulated transcription coactivator 3 EMBV3_23988 GTGTTCCAGGCAAATGAGAAGAAGGGACGGGTCAAGGGTTTGGTGCTACAGTCGGAAGAT Gene BVV0102_192147 + 0 NULL GK000026.2:23686213-23694361 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24440 TGGAACGTTAACCTGCACACCCCTGTGGTCATCTCCCCAAAGTCAAGGAAAAGCAAGCCT Gene GeneID:505861|LOC505861:XM_002687302:230_cdna Constitutive 0 NULL GeneID:505861 5 GENE LOC505861 NULL similar to predicted gene, EG545136 EMBV3_07070 GGCTTTCACTTTTTAGTCACTCCTTGTGAATCTGGTCATTATTTACCCTTAAGAACTGGA Gene BVV0101_088851 + 0 NULL GK000005.2:26878096-26878372 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194331 TCONS_00194330 1 XLOC_117723 Coding TCONS_00194331 XLOC_117723 Coding Coding C5H12orf10 5:26878167-26885806 j TSS145028 1225 1 TCONS_00194331_3 218 6 0.840403246923278 0.00115569007415346 0.000108468453659287 0.000235893028024754 4.88891902475747e-09 5.26707251263102e-05 9.03584583302241e-10 0.000316790239580281 6.88207296610315e-10 4.77104860622396e-09 0.0017337837200248 4.50040432000001e-09 9.013077653792e-09 3.55889682965037e-76 0.000140477664089033 9.39342329539273e-08 0.00230598272469267 0.000819902705967015 0.00493457384228388 0.000751665824057028 0.00085081272976052 0.000933809330795363 0.00132896755256502 0.000982048638036659 0.00133374806161973 0.00025354078781301 0.000914553465784529 0.000221349051033323 0.000857179397379862 0.000633185041443704 0.000167240769970692 NM_001035038.1 C5H12orf10 Bos taurus chromosome 5 open reading frame, human C12orf10 (C5H12orf10), mRNA. 0.0 1216 99.85 0.551836734693878 XM_005269071.1 C12orf10 PREDICTED: Homo sapiens chromosome 12 open reading frame 10 (C12orf10), transcript variant X2, mRNA. 0.0 879 85.58 0.621224489795918 TCONS_00194331_3 sp|Q58DG1|MYG1_BOVIN MYG1_BOVIN UPF0160 protein MYG1, mitochondrial; 3e-160 453 100.00 0.995412844036697 1 coding 1 0 0 0 -0.0547748636168609 0.675798879294041 -0.00500813926196543 0.914316855768848 CCGTGGAGAAAGCTGTATGGGCCACCGCTTCCTGCGCGGTTTCCTGCGTGTCCTGTTGCCGCCGCTACCTCTCCGGAGCCCGCATCTCAAGCTCAGCCTGGAGCCCGTTGCACCTTCCAAACGACCCCGCAGCCACCTCATGGCCCCGCCCCGAATCGGGACGCACAATGGCACCTTCCACTGCGATGAGGCGCTGGCGTGCGCTTTGCTGCGCCTCCTACCGGAGTACCGGGAGGCAGAGATTGTGCGGACCCGAGACCCCGAGAAACTGGCTGCTTGTGACATCGTGGTAGACGTGGGTGGCGAATACGACCCTCAGAGACACCGATATGACCATCACCAGAGATGTATGAAAACTTCGTGGAGGAAGTAGATGCGGTGGATAATGGGATTTCCCAGTGGGAGGAGGGAGAGCCTCGGTACCTGCTGACCACCACGCTGAGTGCCAGGGTTGCTCGGCTTAATCCCACCTGGAACCAGCCCAACCAAGACACTGAGGCTGGGTTCAAGCGTGCAATGGACCTGGTTCGAGAGGAGTTCCTGCAGAGACTAGATTTCTACCAGAACAGCTGGCTGCCAGCGCGGACCCTGGTGGAAGAGGCCCTGGCCAAGAGGTTCCAGGTGGACCCAAGCGGGGAGATAATAGAACTGGAAAAGGGTGGCTGCCCCTGGAAGGAGCACCTCTATCAGCTGGAGTTGGGGCTGTCCCCTGCAGGGACCATCGCCTTTGTTATCTACACAGACCAGGCTGGACAGTGGCGGGTGCAGTGTGTGCCTAAGGAGCCCCATTCGTTCCAGAGCAGGTTGCCCCTGCTAGAGCCATGGAGGGGTCTTCGGGATGAGGCCCTGGACCAGATCAGTGGAATTCCTGGCTGCATCTTTGTCCATGCCAGCGGCTTCATTGGTGGGCACCGTACCCGAGAGGGTGCCCTGAGCATGGCCCGTGCCACCTTGGCCCAGCGCCCAGCACCTACACCTGCCCCAAATCCCATGGTCCAATAAAACTCCCATCTCATGCTGACCAAATAATGTTCTATTACTCCCCTGCACTATTCTGGGAGCTTGCTTAAATTTGGGGAAAGTGTAACATCTATTATGTGCCAGAGCTGGTGCTACGTATTTTCTCAGTTTTGCTTTCAAATCATTTGAAAACTATCCAGTTCTTAAGGGTAAATAATGACCAGATTCACAAGGAGTGACTAAAAAGTGAAAGCCAAGATTTAAA EMBV3_07013 AGTCCAAAATTGGCAGCCAAAAGTCAGGCTGCTTGAAAAACATCAAGTAAAACCCACCTA Gene GeneID:508264|AFM:XM_002688350:139_cdna Constitutive 0 NULL GeneID:508264 6 GENE AFM NULL afamin EMBV3_43724 CTGTCCCGAGACGCAGGTACCACTGCAGCTAGAATCCAAATCTGCCCTAGGTCCAAAAAA Gene GeneID:509326|TBXAS1:NM_001046027:601_cdna Constitutive 0 NULL GeneID:509326 4 GENE TBXAS1 MGC137614 thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A) EMBV3_36692 TCTGCTCCTAACAGGTGAATCCAGAAGTCTAGTTCCTTCATCTTCCACTGTTTGTGCCAG Gene BVT0102_070999 + 0 NULL GK000001.2:127318224-127323035 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005139 TCONS_00005140 TCONS_00005137 TCONS_00005138 TCONS_00005141 1 XLOC_001191 Coding TCONS_00005138 XLOC_001191 Coding Coding PLS1 1:127321048-127451077 j TSS2544 4681 1 TCONS_00005138_3 630 0.136082033753471 16 0.964123111945119 0.00161290039199868 0.000992564319807155 0.000849811192264379 0.000454824843536578 0.000281402021123604 5.77818922488318e-05 0.000247563922524003 0.00018595804799931 6.04616993019777e-05 3.33148953129873e-09 4.00207710712808e-14 0 1.4119544859219e-09 2.32565253827616e-09 3.05739388506029e-12 0.00285900472659493 0.00328178928733056 0.00194013885148385 0.000785766281686283 0.00064638332003385 0.000273902354927122 0.000657811464293847 0.000189621766751582 0.00142973933912532 0.000957346276694479 0.000434711080293236 0.000899796545117867 2.71038217122875e-11 1.35060730939681e-05 1.40705567713455e-05 NM_001103299.2 PLS1 Bos taurus plastin 1 (PLS1), mRNA. 0.0 4087 99.91 0.484939115573595 NM_001145319.1 PLS1 Homo sapiens plastin 1 (PLS1), transcript variant 1, mRNA. 0.0 3573 88.21 0.602221747489853 TCONS_00005138_3 sp|A6H742|PLSI_BOVIN PLSI_BOVIN Plastin-1; 0.0 1288 100.00 0.998412698412698 6 coding 0 1 0 0 1.23060942835618 0.0672692483992287 0.0294432687500353 0.669909624889577 GAGTGGGATCTGTGGTTCAACAACCCCTCCAGGTGATTCCTATCCACGATCAAGTTCGCGAAGCACTTGTAAGCTCACTCAAGTGGTGTAGATGGTCATCTTTAGGTTTGGCGGAGGATGTGTCCTGGGTCGCTTTGGGCAGTAGGGATAAAGTTGCGCAGGTCCCCTCCACCTCTCCCCCTCTCCCCCTAGCCTCTCCCAGCACCTGCAACTCCACTTCAGCTCTTGGCCTCGGGTCCTTTCCCCCGGGAGCCGCAGTCAAAACGCGGCAAGTGGATTCGGAGTCTGCCTGCCAGAATGCCGGCCGGGCATGCGTAGTGGCGCCAGGGCAGCAGCTAGGCTGGCGCGACTGGGGAGCCGCAGAGCAGACTTGCGTGTGCCGGGATCCGGAGCGGTAGCTGAGGGCTCAAGGGCAGAACGGCGGCTGCAGATATAAAGACCTGAAGGTAGTCTTTCCTATTCAGAGATGGAGAACAGTACCACCACCATTTCTCGGGAGGAGCTGGAGGAACTACAAGAAGCCTTTAATAAAATAGATATTGACAATAGTGGGTATGTCAGTGACTATGAACTCCAGGACCTGTTTAAGGAAGCAAGCCTTCCTCTGCCTGGCTACAAGGTGCGTGAGATTGTGGAGAAAATTCTAGCAGTTGCTGACAACAACAAAGATAGCAGAATCAGCTTCGAAGAGTTTGTATCGCTAATGCAAGAGTTAAAAAGCAAAGACATCAGCAAAACATTCAGAAAAATAATTAACAAGAGGGAAGGGATTACTGCTATTGGAGGAACTTCATCCATTTCCAGTGAGGGCACACAGCATTCTTATTCAGAGGAAGAAAAAGTGGCTTTTGTTAACTGGATAAACAAAGCCCTGGAGAATGACCCTGACTGTAAGCATCTCATACCGATGAACCCCAATGATGACAGTCTGTTCAAATCACTTGCTGATGGCATCCTTCTTTGCAAAATGATCAACTTATCTGAACCAGATACAATTGATGAAAGAGCCATTAATAAGAAAAAGCTCACCCCCTTCACTATTTCTGAAAATTTAAACCTAGCCCTGAATTCTGCCTCAGCCATTGGTTGTACTGTAGTCAACATTGGGGCTCAGGATCTCACAGAAGGAAAACCTCACTTGGTCTTGGGACTTCTCTGGCAGATCATCAAAGTTGGGCTTTTTGCTGATATTGAGATTTCCAGGAATGAAGCTCTGATTGCATTGCTAAAGGAAGGTGAGGATCTAGAAGAGCTAATGAGGCTATCTCCAGAGGAATTACTGCTGCAATGGGTGAACTACCATCTGACCAATGCAGGATGGCCTACCATCAGCAACTTCAGCCACGACATTAAGGATTCAAGAGCCTATTTTCATCTGTTGAATCAGATTGCACCTAAAGGTGACCGGGATGATGGACCTGCCATTGCCATTGATCTTACAGGATTTAGTGAGAAAAATGACTTGAAGCGTGCTGAATTCATGCTTCAGGAAGCAGACAAACTGGGCTGCAGACAGTTTGTTACTCCTGCAGATGTGGTTTCAGGCAATCCTAAACTTAACCTGGCTTTTGTAGCTAATCTGTTTAACACGTACCCAGGCCTCCACAAGCCTGATAATAATGACATCGATGTGAATTTATTGGAAGGAGAGAGCAAGGAAGAGAGGACATTTCGGAATTGGATGAATTCCTTGGGAGTCAACCCATATATTAATCATTTGTACAGTGACCTTGCAGATGCATTAGTCATCTTTCAGCTCTACGAAATGATCCGTGTGCCAGTTGACTGGAGCCATGTGAACAAACCTCCTTATCCTGCTCTTGGAGGGAACATGAAGAAGATTGAAAACTGTAACTATGCAGTGGAACTTGGGAAGAATAAGGCCAAATTCTCCTTGGTTGGCATTGCTGGGCAGGACTTAAATGAAGGAAATTCAACACTCACTCTGGCATTGGTGTGGCAGCTGATGAGAAGGTACACACTGAATGTGTTATCGGATCTTGGAGAGGGTGAAAAAGTAAATGATGCAATTATCATTGAATGGGTCAATCAGACTCTTAAAAGTGCAAACAAAAATACTTTCATTTCCAGCTTTAAGGACAAATCAATTAGCACTAGCTTACCTGTCTTAGATTTAATAGATGCCATTGCACCAAATGCAGTTCGTCAAGAAATGATTAAGAGAGAAGACCTTTCTGATGAGGACAAGCTGAACAATGCTAAATACGCCATTTCTGTTGCTCGAAAGATCGGTGCCCGGATATATGCCTTACCTGATGACCTTGTGGAAGTGAAACCAAAGATGGTTATGACAGTGTTTGCATGCTTAATGGGAAAAGGACTGAACAAAATAAAATAATGAAGCATTTAATATGATTTTCTGCCACATTAAACACATGGAATGTCTCACAGTTTACAGAATTCTGAAATGTAGTAGGTATAAAACCAGAGATTATTTGTATGCTCAAAATAGTTGTAGAAATCATTAATGATTTTAATAGCCTGTTCATACTAGTTAGGATTTGTTGGTCTTTTTGGATAACACAATTAAATTTACCAGTTGATACTGATAATAGAATATGTTTATTTTCAAGATGATACTTTATGATTATTTTCATTTCCTTGAAGTCTCCTTAAAACAAGACTAATTCATTCTTTTTCATGGTTCGAAATGATCAATACAAAAATTTTTCTGCAAGCCCTGATGTGAAGTATGTTTTGATTTTGTGTGTGTGTTGATTTTGATCATAAATGTATTCAGAGTCAAAATCCAGCTTAATCCTTTTATTTTTTTCCTCCAGCTATGTAAAGTGGTCCAAAACTTTAGCTTTTCTGTAAATTTCTATAGTGTCTAAAATTTTTAAGCGACAAGTATTGTTAACACTAAACTTTTTTTATATAAGGACTAACTCATGAATAAACTTCAAAGTTCATTCTCTTATATAAGTATTAATAGCAGGAGATTTTTACTTAACACTTAATTTTAACTACATGATACTTTATATATACTGCATGACATGCAGATATATATATATATATATATAGGTAAGATGTTATTAGAGAAATATGTGTGTGTACGTATATATATTTTGCACCTGAATTACCCAGGTTTTCTTAACTAGTATGTATACAGACAGCCCTCCATATCTGATGTGTGCATATCAGATGGTCCCACATCCATAGATTCCCACAACTGCAGATCAAAGATATTTGGGAAAAAAAAAAGAATTCCAGGAAGTTAGGAAAAGCAAAACTTAAATTTGCCAAGTGCCAGCAATAATTTCCATTGCATTTTCATTGTATTTACAACTATTTACACAGTATTTACATTGTATATTAGGTATAAGTAATCTAGAGATGATTTAAAGTACATGGGAGAATATGTGTAGGTTATATACAAATACTGTTTCATATTAAGGATGTGAGCATCTGTGGATTTTGGTATCCTTGTGGTGGGTGGGTGGGGGGCTGGTTCCTGGAACCAACCCTCTGGATACTGAAGGAAGACTGTATTGGTCGGTTAGCCAACCGTGAAATAATTATTGTGTCCCCACTAGCTGTGTAACACTTTTCAGTTTGTAGCTATCTGGTACATGAAGACTTCTTTTAGAAATATTCATTTTGGGTATGCATATAGTTACTTTTCAACTGCTTTCAAATGTTTATAGCGACTGTGGCTACAGCTCTCAAGACATGTTGATGCTGTGTTGTTAGCTTCATGTTACACATGCTAATTTTTGATACTCTAGCCCTAAATAATTTAGAATATGCCTGTTAAATATCTTTAGAAGAAAGTAACACAAAGCTAATATTCAGCATATTTTCACATTTTCCCAGTTTCCTTCAAATTGGCAATGTTTGATTAATATTTATGTCACTTGGGAGTAGCAATGCTTCAGATGTATTTTTGTCTGAATTTTTGGCAATAGACCGATTCTGCTCCTAACAGGTGAATCCAGAAGTCTAGTTCCTTCATCTTCCACTGTTTGTGCCAGTGAGCAGTACTGCTGTACTACAAAAAATGCTGTCATTCTATCTCACTGTGAATGAGTAGTCTAAATCCCCCATCTACCATGGATTAGAACATTCATGTTGGTAAGAGTGAGACAACTCCTATGTTTAGAATAGAAATTTTTTTGAAAGAAATATCAACAGGTGAGACTTTGAAATATATTCTTCTATAAAAGAAATAAAAAAGATTTCCTTTCTTAATTTTATAGTTTGATGATGATTATCTTATATGAAGATGTGTTCTTGCTCTTTTGTGAGATTATTTAAATTATGTTTCCCCTTTTGATTTTTTTTCCCACCATATTCGCTAAGTTCTCTAACTTACATGAAATTTGGCACTTTAGACTGTTCTTTTTCTCACAAAAAATTTAATAAAATTCTGTGTATGTACAAATGTGTCTGTATTTATTTCATTTAAAGAAAAATACATAACTTTGAAAATTAATCTCACAGACTCATTTTCCAGAAAAGACTTTGTCATAAATGGATGTTGAATTTTGCCAAAAGCTTTTTCTGCATCTACTGAGATGATCATGTGGTTTTTATCTTTCAGTTTATTGATACGGTGCATCACATTGATTGATTTGCATGTACTGAAGAATCCTTGCATCCCTGGGATATATCCCACATGATCTTGGGGTATGATCCCTTTAAATTAAAAAAAAAAAAG EMBV3_10134 CTGAGATCAGATATTCCTGCCAGAGGCCCTACTACAAGATGCTACACAATACCACAGGTG Gene GeneID:522347|MASP1:NM_001076968:87_cdna UTR3_Alt 2 NULL GeneID:522347 1 GENE MASP1 MGC140512 RPIB9 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) EMBV3_27919 TCTCCCATTGTGGTGGATAATTTGAGATTCCAGGACTACGGCCCTAAAACACCGGGGCTT Gene BVT0102_164258 - 1 EMBV3_29266 GK000005.2:108549603-108552852 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29526 GGGGAAAGTTATTTTGGAGAAATGGGACTCAGGTCGGCAAAAGCTCCTATGTAGTTGGCC Gene GeneID:614583|SERTAD4:XM_002694266:262_cdna UTR3_Alt 2 NULL GeneID:614583 16 GENE SERTAD4 NULL SERTA domain containing 4 EMBV3_22873 GACAAAGATGACCTGCTGCTGTTGAGTGAAATCTTCAATGCTTCCTCCCTGGAAGAGGGC Gene GeneID:535346|ICA1:NM_001038168:41_cdna Constitutive 0 NULL GeneID:535346 4 GENE ICA1 MGC134001 islet cell autoantigen 1, 69kDa EMBV3_10596 TAGACAATTACCTGACATCCCCCCTCCCAGATGAAGTAGATGAGACCAGTGCTGAGGATG Gene GeneID:515646|CLIC1:NM_001015608:132_cdna Constitutive 2 NULL GeneID:515646 23 GENE CLIC1 NULL chloride intracellular channel 1 EMBV3_09302 CCCAGAAGTATTGTCTTTTCACTGGGCCTATCACAAACTTGACCACCATCTGTGTCTCTG Gene GeneID:100125920|CCDC54:NM_001105490:19_cdna Constitutive 0 NULL GeneID:100125920 1 GENE CCDC54 MGC137076 coiled-coil domain containing 54 EMBV3_08442 CAACATTCTTGTCTGCCCTGATTGATGGTCATAGACGTCAGCTCTGCAACAGAAACAGAG Gene GeneID:541143|ZNF131:NM_001101218:86_cdna Constitutive 0 NULL GeneID:541143 20 GENE ZNF131 NULL zinc finger protein 131 EMBV3_01445 GGTGAGATTGATTGTGCACTGCCAAGCTACCCCAGTGCGGGATACTCAGGTTGAATCACT Control NULL NULL 0 EMBV3_09701 NULL NULL NULL NULL NULL NULL EMBV3_07673 CCCTGAGGAACCTACACCCAAATTGAGACAAAAACCTTAAGAAAACCAATGTTTGGGGCC Gene BVT0102_294984 + 0 NULL GK000006.2:58561598-58581623 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00208764 1 XLOC_127276 NonCoding TCONS_00208764 XLOC_127276 NonCoding NonCoding - 6:58568755-58569786 - TSS156271 1031 4 TCONS_00208764_1 58 0.314258001939864 1 0 0 0 0 0 0 0 0 0 0 0.00028334516587818 6.66105645001936e-06 0 0 0 0 0.000691671213937934 0 0.000851775141415276 0 0 0 4.3185226282294e-05 0.000231354127537046 3.25209728542765e-05 0 0 0 9.3163689108487e-06 0.000103589824002045 0 NM_001192214.1 DPYS Bos taurus dihydropyrimidinase (DPYS), mRNA. 2e-22 111 86.81 0.0872938894277401 0 noncoding 0 0 0 0 0.0442932154036753 0.737615172246555 -0.010377804784951 0.820543031637845 GTGGAAGTTTGGTCTCCATCATGAGAGCAGGTTACCCTGAGGAACCTACACCCAAATTGAGACAAAAACCTTAAGAAAACCAATGTTTGGGGCCAAGCAGTAGGAAACTTGGCTGACCACGCTTTTCAGTCATCTTGAATTCAATCTTTCAAATCCTGGAGGGGCAAGAAAAGAAAGGATGTATGTTTGTGACTCAAGACTCTGATGTCACTTTTCTCTTGGCTCCTCATGTTAGAAAAAGTACAAAGGGGTTGACTCTGCAGTTAAAACCCCTGCAGCCTTGGGTGGTGACCTCCAGGTGTTCAACGGTTCTGACCACACAGCGCAGGCTGGGCACTCACACTCATCCACTTTTTTAATCAGCCTAGGGTGGAATTAGCCTGTGCCTCTTACTCATTGTATGATTTTGGGTTTAAGTTTCTTAACCTTTGTGCCTGAGTTTCCTCATCTGTGAAATGGGGATCACTACTACATGTCCAGTGGAAAGCAGACATTCTCAAATTTGAGTGTGCTTGTTTTACGAAAGCAAGTTTCTGGGTCCCAGCTCTCAGAGACTTGGATTCAGCAGGTCTTGGGTGAGGCCCCGGCATCTGCAGCGTAGATGCAGATATTTCTCCAGCCACACTTGGAGACACACAGAGACCGGAGCAGGACTTGCTTCATCTTTTTGATCTTGCACCAGCTATCAATAAAAAAAGTCACACTCTTACCCCTAATAGAAGTATGTTTACAAATAAATGTTCTGTCCTCTTGTACTGTGTCATATACTTTGTAGAGCTGGGAGATACTGGAGGACAGAGGAGCCTGGAAGGCTGCAGTCCATGGGGTTGCAATGAGTCCGGCATGACTTAGCAACTGAACAACATCAATAACATTAAGATAAATATCAATCTGGGTTTTAATCCATTCATCCCACACCCCTGGGTTATGTGAAACCTACTTTGAAAACCCCTGATTTAGAAGCTCAAATGAACTATGTATAAAAACACTCTAAATAGACAAAACTGAACTAAGATTTTCGACAAAATACA TCONS_00203209 TCONS_00203210 . 3' 2458 TCONS_00203209 TCONS_00203210 . 3' 3488 EMBV3_20328 CGACTCGGGCTCAGCCCTCTTGTGTTGAAGAGAACTGGGGTGCTCGTTTCTGATTCACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04955 GGAAGAGTGCGAGAAGAGGAAGGAAATGAGACTGCCTACCCTGTGGAGTAAACCTGCTCT Gene BVT0102_282307 + 0 NULL GK000003.2:108691381-108695142 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00171227 TCONS_00174634 TCONS_00171225 TCONS_00171229 TCONS_00171226 TCONS_00171228 TCONS_00174635 TCONS_00174633 2 XLOC_103774 XLOC_104654 Coding TCONS_00174633 XLOC_104654 NonCoding Coding C3H1orf122 3:108691673-108696240 j TSS129557 4452 2 TCONS_00174633_11 79 2 0.0254051686377573 0.000604338966609174 0.000454218332019915 0.00145380516436642 0.000471479149190271 0.000436379007088821 0.000100515009692479 0.000656985583492025 0.000894238011942116 0.00164417296199933 0.000271132782329059 1.22147615062881e-05 5.36845493681796e-05 0.000431982151987647 0.000194402117460185 0.000161906411518709 0.000764258449617213 0.00129155260158328 0.000411942336697506 0.00234028846003911 0.00236799692588307 0.000979738065625687 0.000646441872127953 0.000602737871232158 0.00114708449078731 0.00118595795784256 0.00291083297409194 0.00089326761583308 0.000317335881916043 7.88637236305851e-05 0.000316844207973199 XM_003582029.2 C3H1orf122 PREDICTED: Bos taurus chromosome 3 open reading frame, human C1orf122 (C3H1orf122), transcript variant 2, mRNA. 0.0 861 100.00 0.106918238993711 NM_005955.2 MTF1 Homo sapiens metal-regulatory transcription factor 1 (MTF1), mRNA. 0.0 3061 80.14 0.761006289308176 0 noncoding 0 0 0 0 -0.0155163538760995 0.920869033466953 0.00189878590581062 0.969099458465921 ACTGCTTAACCCCCTACTGCCTTTCATCTGGACGAGAGGCTTTGAAAAAAATGTCTCAGCCAAACCTGGAGCGCCCTCCCAGCCAGCTGTCTCCTCCAGAGGTGGCTTTCCAAAGGATGCTAGCGATGGAGCTGCGGAGCCTTGACCATCCCCGAGCCGGGCGCCCTATCTTCTCTCCCTCCCCGGGGCTGGTGGCTGGACTCTGAACAACTCCCTTTCAATAAAGGGGCCAGTCTTCACTGGCAATGGCTGGTATTTGGCTGTCAGCCTGGGGAGGCAGCTCTGCTAGCAGCTGGGTTCACTCCCACTTCATCCTGGCTGAAGGCAGTGCTGAGCTCTGAAATGTAGCTGACGAATGAATACCCAGTCTGATTACCCAGATTTGGGCAGACCAGCAGTGCTCGCCAGAATTATCTGGCCTGTTCTGGGGGATCCAGGTGGTGTTACATGTCCATTTCATGCTTTGGGGGCTCCTAGCCCCACAAAACACTTTTAGCAGAGCCTTTATTAAAAGGAATCCTGCAGACTCTCCTGGTGACCGACCTTTCCTTTCTGTCCCCTCTAAAAACTCTGATGCCTGGGGAGTGGGGAAGTGGTTGAAAACTGTCAGCCATGGGTAGGGTTGGGAAGAAATGCCACAGATACTACCAGATTTAAATAAGCATTTAATTAGGATTTCATTAGTATTTAATATTGCTTTTTTCAATTCCAAAAAGTTAAATTTTCACTTCTTAGCAGATATTTTAAAGTACAATATTAAGTTTATACAAAATGAGCAATTAAGCAAACACCATTATTTCACATTCTTCAAAAATACAAATTCATATTTATTCTTTTTTGGGTTTAGAGGTTTCTTCCTTTGGAAGTACTGAACCTGTAACGTTTTCATATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACAAATAAATTTGGTAGGCTTTTACATAATCCAAATAAAACTATTTGGGATTTTAAAAAACTTTCAACCAAGACCTCTGGCCAATGACTAGTGTGTGTCAAAAAAAGAAGGTTGTTGTGGGTCCTGCCTCTCCTGGCCAGAAAATCTGAGCCAGAGATTCAGCAAAACCCTGTTTCCAGCCACCTTCCCCAAACAGGAACTAGGAGTTTACAGGGAAAAATAACAGCCACCTTGAATTCCGACCTCCCACCCCCATATTCTCCAAAACACAACAAAGGATGTAGACTGTTGTGTCAAACGGCGCCCTGGGGAGGCCTGAGGACACGGGGGAAAAGGGCAAGACGGGCCTCTTGGACCTGGCACCACTATGAGGATAACAAGGATATTGCAGAAAACACCCCTGGGTTTGGTGAAGAAAAGATTTTATGAAAAATTTCCCCGTAAGAAAAAGAGTAGAAACTGCATTGAGCTGAGAAAGTGACATGACATCACCCAATTTGGGGCCCAGCAAGCACACCACCAAAAGGGCAGTGTGTGGTTTTAAACTTTGCTTCCAGTAAAAAAAGCTTGTACTATGTACACAATGACATAAAGATCCAGTTTAATTTGCATTTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGAGTAACAGAAATGCCCAACAGTGATCATCAGCTTCCCCAAAAGGTTTCAGAAGAAACATGGGACCCCTTCTCTTGCCTCCCAACACATGCAAGAGAAAAAAGGCTAAACTGACGACCAATCAGAAATATGCTTAATTCAGTTTTGTTGCCTCTCCCCTCCCCAATATTTAGGAATGGTCAATTTCTGATCTATCTCATAGCAGAACTATTTGTATATGATCTATGGAAATCTTTCTGCTTTGGCTGAAATATGTTTTAAAACTTCTCTATTCATTGTAGCCTGAAAACTGAAGATAAAATGGGAGGGGAGAGGAGTGAGAGGGAAGGAAGAAAGTTCATAAAGCAGATTATTAACAGCTTTGTTTACTGGATTCAATGAAGGCTGGAGGCTTTTGCTTAAAGAGACAGGATGGCTAGGGTGGTGACCCCCACCACCTTCCCCAAACATATTTCTGATTGGTGGTGTAGAAATACTGTAAACTCATTAGCAATATTGTTGCAGTTCCACAATCAATGATTTCAGTGACTCTGGAGAAGTCTTTAGGATTAAGGACAATAGACCTGATTACAAATGTAAAAGTCTAGAAAGTGCCAGGTGTCTACCTAGGAACAACCGGTTTCTTCCTTTCAGGCATCACTGTGTAACGGTGAAGGGGGAAAGATGGCAAACGGCCAAGCAAAAGTGATGAAAAAGGGCCTCAACAGTCAGCAGAAGAAACAGGACCCGCAGCAGTTCTTCAGAGAGCCTGAGGGGGTGCCCTTGGGCACACAGGGAAGGCTTGCATAGATTGAGCAGTTGCTGAGAATGCATAATAGTGTTTCCCTATGGACAGCCTCATAGCACAGGGCTGATAGAGTGGAAAACGCGGCCAGGCCAGGGTCACATGGGACAACGACCGTCAAGCTACACATATTGCACCAAGGTAAGTGCTTTTCTTGTCACACCTCAATTTAACTTTTTTTCTGAGCAAAAAATAAAACTTTGTGGAAAGTATATATATGTATATATATACACACACAAAAGAAATTGCAGCAATTGAGTTAAAGATAAAATAACCTAAAGTGCTTTTTTTAAAAAATTATTTCTTTAATATACCAATATGAGGTTCTGCAAACCCGTCCCTTTGGACACATTCAGCATTATACAAAATCTCTCAGAAAAACCCACCCGCCCATTATCCCCATCAGTCTGCTGCCTTGACCCTGAAAGTAAAACTCTCCAGTCTATTAACTCTCCAGAGATGGTGAAAAGAAGTCCCTTTCTTCTACCCAGAGCAGTCTTCACACCTGAAGGCCCCTCCTGGGCTTTGTACCATGATCTCCTTCTAAAGGGGGGATGAGGTGGGGTGGGGTGGGATTCAGTGAGTGACACCAGTTCCTGTCATCAAACTACTGATGCCCCCGAGAGGTTGGCCAAACTGCCAGGAAAGGTAAGGCCACTTTCCCTCAATGCCTCCCTCACCTACCTGGGAAGGGCCAAATTCACTAAGGCAATTTGGTGGTGCCAGCCAAAGTTTGCGGCCACCTGCCAAGCCCACAAATCCCCAAATTCCCCAGGCTGACTAGCACCCTATAAAGGGGCAGTCTAACTGGAGATGCCAGTGGGAGCAGAAAGTCTCAGTCTATGGGGGGTTTGATTAAGGTTACCGTGGGAAGAAAAAAGGCGTGATATTACCTGCTGGAAGTCTGCACACCTTCCCTAGCTTCACCCTAGAATCGTTCCTGGGTTTGAAAACCACTCTTCGTGAAGGCTCTTTGTGGCTCCATTTTCAGTGGCCCTCTCTTCTCCAAGGCCCTTGGCACTAGAGACCAGGCTGATAGAAGGGGGTAGGTAGGGTGGGGAAGAGTGCGAGAAGAGGAAGGAAATGAGACTGCCTACCCTGTGGAGTAAACCTGCTCTTCACAACCACTCACTAGCATTTTAAGCATATCCCTGATGTTTTCAAAAGCCCCCCTGTAATCAGTCGCCCTCAAAAGGCAGACACTTCAACTAGAAAAATCTGTCAGCCTAAAACTCTGCTTCTTCACCACCCTCAACCTTAGGAGAGCAGAAAAGTCACTGACCCAAGCAGACCCAACACAAGCACAGCAGTGGGGAAGCAATATATCAACCATGGGCACTTCCGACGGCCTTCACCGGGCTCCTGTTTTCCACCTCAGCTCCCAGGAGCCACATCTCAGGTGAGCCTAGGGTGCGCGCATGGGGAGGTGTCTTGGGACCCCACTGTGCTGCTGTCTCTCAGAAGGTGTAGAGAAAACAGCCAGGGACCTACCGCAAAGCTTCCCACAAGCTCAAGGCTGAGCGACAGCCAAGGACAACCCATACTCAGCAGCTGTTTTCCAGGGAGACGAACCCACTGTGGTAACAGAAGGTTCCTCCTGCCTTATCAACTTCTGCTGAGGTCAGTGGTCACCCAGAACCCACCAGTTTTTTGGACAGGAGAATGCAAAGGGTCAAAAAAGAAACGGATTCTCCTGACTAGACCCCAGGAGTGAGAAACCACCAGCTGCTTGTAGTAAACCCCACTTCTCTCCATGGCAGTCACATTTACCACCTCTGCCCTCTCATCCGAATCTGTCCCTGAACATCCTGTTAAAAGCAGGGCCCCTGGCTCCCAGGTAAATGATTACTCTAGATACTGTCTTGGCTGGCCCTGAGTAATGGTGCAGGGAACAGGAGAGTGACAAATGCAGATCTCGTCACCTTAGGGAGTGAAACAGGAAGGCGAAATCACGGCTGCTTTCTGCCTAACGTCGCTGACTCAATAGGGCAGCCCTGTGTGTGGCACCCTACTGCTTGCTCAAGGCAGGGACGAGGCCCTTGGGAGGCAGAGGCCTCGTTAGACCTTGGGCCATACCTAGTTTCTGAGTTCAGTGAG EMBV3_02502 CGGCTCTGCGGACTGCTGGTTCTAGTGTCATGGATGATGAGTGCCCTGAATTCCTTGATA Gene GeneID:509641|LOC509641:XM_002688615:397_cdna Constitutive 0 NULL GeneID:509641 7 GENE LOC509641 NULL similar to olfactory receptor, family 7, subfamily A, member 17 EMBV3_29944 TTATTTGGAGAGCAGATACTCATTCACTGCTGAGAAGGAGAAACTTTAAACTGCCAACAG Gene BVV0102_098628 + 0 NULL GK000010.2:34069009-34162004 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18131 GTATGCAATAAGGTGGTAAAGATGGTAACAGGAACAAGAAAGCAGGAATGTAGCTAGAGC Gene BVV0102_202212 + 0 NULL GK000018.2:36898691-36911355 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083087 TCONS_00083090 TCONS_00083091 TCONS_00083084 TCONS_00083096 TCONS_00083089 TCONS_00083092 TCONS_00083095 TCONS_00083088 TCONS_00083083 TCONS_00083086 1 XLOC_051175 Coding TCONS_00083096 XLOC_051175 Coding Coding NFAT5 18:36858174-36907395 j TSS62530 13077 1 TCONS_00083096_6 1451 0.0206469373709566 14 0.734599756196668 2.07835388096481e-68 0 3.638377206968e-19 1.6188053914834e-19 0 9.75327017566742e-295 2.51548228038706e-11 5.39831940906822e-10 2.84924498533314e-21 1.03335249031392e-12 1.15761163436255e-11 7.96428600958269e-44 8.42966181091708e-12 3.64844813303386e-05 7.83636631103408e-05 0.000439173794723799 0.00167219671520423 2.64308245603276e-12 4.40874505891963e-18 3.35914948460294e-22 9.64413498531332e-28 0.000466464523675797 0.000330438663180156 0.00148693119783899 8.67706649867767e-49 5.65552778680393e-10 4.20891172450805e-06 8.63319379415836e-09 4.62685203639912e-05 0.000680844899023865 XM_005218872.1 NFAT5 PREDICTED: Bos taurus nuclear factor of activated T-cells 5, tonicity-responsive (NFAT5), transcript variant X3, mRNA. 0.0 2.217e+04 100.00 0.939894471208993 NM_173214.2 NFAT5 Homo sapiens nuclear factor of activated T-cells 5, tonicity-responsive (NFAT5), transcript variant 4, mRNA. 0.0 1.056e+04 88.20 0.630037470367821 TCONS_00083096_6 sp|O94916|NFAT5_HUMAN NFAT5_HUMAN Nuclear factor of activated T-cells 5; 0.0 2589 94.04 0.999310820124052 1 coding 0 0 1 1 -0.0576391302964887 0.652812773328584 0.00836613586635694 0.862331836034522 ACTCTTTCGTTAGACTTCAGTCAATAAAATTGACTGTTTACTCACCTGAAGAAATTCCCTTAATAGTTCAAATCAAGTAGACCTTTTAAAGAGAGAGTAAATAGACAGTGGTAACCAAGTGCTGAATGTGTAATCAAGTACTTTACAAGAAAAATCCATCCATTAATAAGTCCTTCCTCTGTTTTTCATTCTGCCACAAAGGATGGTATTATTAGAGATCATGGTTTTGAACTGCCACTTACAACTTCTGGAGACCCTCAGTAGTTAACTTGCTTATCTTCTACAGCCCAGCCTGTTCCAAATCAAACCTTTTTCATTTTTATTCTTCTAGGTTTTAAAATAATTGTAGTGACGGTACCAGTTCCATTTTGCCTCCAAGATTTGCCTCTGAAGCAGGGAGTGTCTGCATTAAAAATGACCTGTAGTTCTCTGCTTCATAGATGCTTCTTCAGCTCCCTCCTCTTCCTCCATGGGCGGTGCTTGCAGCTCCTTTACCACCTCTTCCAGCCCTACCATTTATTCTACCTCAGTCACCGACAGCAAGGCTATGCAAGTCGAGAGCTGCTCCTCAGCCTTGGGGGTAAGTAACCGAGGGGTAAGTGAAAAGCAGTTAACCAGTAACACAGTTCAGCAGCATCCATCAACACCGAAGAGGCACACAGTCTTGTACATCTCACCACCACCTGAGGACTTGCTGGATAACAGTCGGATGTCCTGCCAGGATGAGGGGTGTGGATTGGAATCTGAGCAGAGCTGCAGTATGTGGATGGAGGATTCCCCCTCCAACTTCAGTAACATGAGCACCAGTTCCTACAATGATAACACTGAGGTACCTCGTAAATCACGAAAACGAAATCCAAAGCAGAGGCCGGGGGTCAAACGACGAGATTGTGAAGAATCTAATATGGATATATTTGATGCCGACAGTGCCAAAGCACCTCACTATGTGCTTTCTCAGCTTACCACGGACAACAAAGGCAGCTCAAAAGCAGGAAATGGAACATTGGAAAACCAAAAAGGAACTGGAGTAAAGAAGAGCCCTATGTTATGTGGACAGTATCCTGTTAAAAGTGAGGGAAAGGAGCTGAAGATAGTTGTACAACCTGAGACCCAGCACAGAGCTCGGTACCTGACTGAGGGTAGTCGTGGCTCAGTAAAGGACAGAACACAGCAAGGCTTTCCTACAGTGAAGCTGGAAGGCCATAATGAGCCAGTGGTGTTGCAGGTGTTTGTGGGCAATGACTCTGGTCGAGTGAAACCACATGGATTTTATCAGGCCTGCAGGGTAACTGGGCGAAATACAACTCCCTGCAAAGAAGTGGATATCGAAGGCACTACTGTTATAGAAGTTGGCCTTGATCCAAGCAACAATATGACACTGGCGGTTGACTGCGTAGGGATATTGAAATTGAGGAATGCTGATGTTGAAGCCAGAATAGGAATTGCTGGTTCCAAGAAAAAGAGCACTCGTGCCAGATTGGTTTTTCGAGTTAATATCACAAGGAAAGATGGCTCCACTTTGACACTGCAAACACCCTCTTCTCCAATTTTATGTACTCAACCAGCAGGAGTGCCAGAAATCTTAAAGAAGAGCTTGCATAGCTGTTCGGTGAAAGGAGAGGAAGAAGTATTTTTAATTGGCAAGAACTTTCTGAAAGGAACTAAAGTTATTTTCCAAGAAAATGTTTCTGATGAAAACTCTTGGAAGTCAGAAGCTGAAATTGATATGGAATTATTTCATCAGAATCATCTTATTGTGAAGGTTCCCCCATATCATGATCAACATATAACTTTGCCAGTAGCAGTGGGAATATATGTAGTAACCAATGCTGGAAGATCTCATGATGTTCAGCCTTTCACTTACACTCCAGACCCAGCAGCTGTTGCTTTGAATGTGAATGTAAAGAAGGAAATATCTAGTCCGGCAAGACCTTGCTCTTTCGAAGAAGCCATGAAAGCAATGAAAACTACTGGATGTAACTTAGATAAGGTAAATATGCTTCCTAATGCTCTGATCACTCCGCTCATATCAAGCACTATGATTAAGAGTGAAGACATTACTCCAATGGAAGTAACAGCAGAGAAAAGATCGCCTTCTATTTTTAAGACTACAAAGACAGTTGGATCAACTCAACAAACGTTAGAAAATCTCTCTCACATAGCAGGAAATGGGTCTTTTTCATCATCATCTTCCCACTTAACTTCTGAAAATGAAAAGCAACAACAGATTCAGCCCAAGGCATACAACCCAGAGACCCTGACAACTATCCAAACACAGGACATTTCACAGCCTGGTACTTTTCCAGCGGTTTCTGCGTCTAGTCAGCTGCCCAGCAATGACGCACTACTACAGCAGGCTACACAGTTTCAAACAAGAGAAACTCAGTCTAGAGAGGTGTTACAGTCAGATGGTACAGTGGTTAACTTGTCACACCTGACTGAGACATCACAGCAACAGCAGCAGTCTCCACTGCAAGAACAAGCACAGACTTTACAGCAGCAGATTTCATCAAATATTTTCCCATCACCAAATAGTGTGAGTCAGCAACTACAAAATACGATACAACACTTGCAGGCAGGGAGTTTTACAGGCAGTACTGCCAGTGGCAGCAATGGAAATGTTGACTTGGTCCAACAAGTTTTAGAGGCACAACAGCAGTTATCTTCAGTTTTATTTTCTGCTCCAGATGGTAACGAGAATGTTCAAGAACAGCTTAGTGCAGACATTTTTCAACAAGTCAGTCAAATTCAAAATAGCGTAAGCCCTGGAATGTTTTCCTCAACAGAACCAGCAGTCCATACCAGACCAGATAATTTAATAGCTGGAAGAGCTGAAAGTGTTCACCCACAGAATGAAAACACATTGTCTAATCAGCAACAGCAACAGCAGCAACAGCAAGTGATGGACTCCTCAGCTGCAATGGTGATGGAGATGCAACAGAGTATCTGCCAGGCAGCTGCCCAGATTCAGTCAGAGCTGTTTCCTTCATCTGCTTCAGCAAATGGAAACCTTCAGCAGTCTCCAGTTTACCAGCAGACTTCTCATATGATGAGCGCATTATCAGCCAATGAGGACATGCAAATGCAATGTGAATTGTTTTCTTCTCCTCCGGCAGTTTCTGGAAATGAAACTACTACAACTACCACACAGCAGGTTGCAACTTCTGGCACTACCCTGTTTCAGACATCAAATTCAGGAGATGGAGAAGAGACTGGAGCACAAGCAAAACAGATTCAGAACAGTGTCTTTCAGACCATGGTCCAAATGCAACATAGTGGGGACAGTCAGCCTCAAGTTGGCCTTTTTTCATCTACAAAAAGTATGATAAGTGTTCAAAATAGTGGTACCCAGCAGCAAGGCAATGGTTTATTCCAGCAAGGTAATGAGATGATGTCACTTCAATCAGGGAATTTTTTGCAGCAGTCTTCTCATTCACAGGCTCAGCTTTTTCATCCTCAGAATCCTATTGCTGATCCTCAGAACCTTTCCCAGGAAACTCAAGGTTCTATTTTTCATAGTCCAAGTCCTATTGTCCACAGTCAGACTTCTACAGCCTCCTCTGAACAAATGCAGCCTCCAATGTTTCACTCTCAAAATACCATGGCTGTGCTGCAGGGCTCTTCTGTTCCTCAAGACCAACAGTCAGCCAACATATTTCTTTCCCAAAGTCCAATGAATAATCTCCAAACCAACACAGTGGCCCAGGAAGAACAGATTTCATTTTTTGCAGCTCAGAATTCAATTTCTCCACTTCAGTCAACATCAAACACTGAGCAGCAAGCTGCTTTCCAGCAGCAGGCTCCAATATCACACATTCAGACCCCTATGCTTTCCCAGGAACAGGCACAACCCTCCCAGCAAGGTCTGTTTCAGCCTCAGGTTTCCCTGGGCTCCCTTCCTCCTAACCCAATGCCTCAAAACCAACAAGGAACAATCTTTCAGTCACAGCACTCAATAGTTGCCATCCAGAGTAACTCTCCATCCCAGGAGCAGCAGCAGCAGCAACAACAGCAGCAGCAACAACAGAGCATTTTATTCAGTAACCAGAACGCCATGGCACCAATGGCGTCTCAAAAGCAGCCACCACCAAACATGATATTCAATCCAAGTCAAAATCCAGTGGCTAATCAGGAGCAGCAGAACCAATCAATTTTCCATCAACAAAATAATATGGCCCCAATGAATCAAGAGCAGCAGCCCATGCAATTTCAGAACCAGACCACGGTTTCCTCACTTCAGAACCCAGGTCCTGCCCAATCCGAATCATCACAGACCTCCTTGTTCCATAGCTCACCTCAGATTCAGTTGGTCCAAGGGTCACCCAGTTCTCAAGAGCAGCAAGTAACACTCTTCCTCTCTCCAGCATCCATGTCTGCATTGCAGACCAGTATGAACCAACAAGACATGCAACAGTCTCCCCTTTATTCCCCTCAGAACAACATGCCTGGAATCCAGGGAGCCACATCTTCACCTCAACCACAGGCTACTTTATTTCACAACACTACAGGAGGTACAATGAACCAGCTACAGAATTCTCCTGGCTCTTCTCAACAGACATCTGGAATGTTCTTATTTGGCATTCAAAATAACTGTAGTCAGCTTTTAACTTCTGGACCAGCTACATTGCCAGATCAGTTGATGGCCATAAGTCCACCAGGCCAGCCACAAAACGAGGGCCAACCACCTGTGACAACACTTCTTTCTCAGCAAATGCCAGAGAATTCTCCAATGGCATCCTCTATAAACACCAACCAGAACATTGAAAAGATTGATTTGCTTGTTTCATTGCAAAACCAAGGGAACAACTTAACTGGCTCCTTTTAACTGGATATAAATTCCATGAAGAAAATCCTGATTTCAAGATATCCTGAGATCTTGTGATTCCATGAGAATTATCGAACTGTTACTTTAAAAGAAAACAAAATATGAAAAACTGTGATTGAGTAAATGGATAGATTTTACTCTGGCTGCAAAAGAGCACACCTTGGCTACCTATTGCAGTGATTAACCACCATTGTTAACATCTTTATATTTTATGTTCCTAATAACAGTGATGACTGAGAATCTATTTGAGTTTCCAGCTGACAGAATTAATTATTGCTATTTCTGTAGACACTCTTTCTTTAAAAGTACAGTTTAAGTTGACAAGCTGGATCACTCAGTTATTATTGCTATTAGAAAATAATTCATGTTTCATGTTTACTTCTGTTCATTTGTATTTTCTTTTCTGCATTGTTTAGTCAAGTAGTGGCTTATGAAAAAGAGTTGAAATAATAACTAAGGCTGTAATTTTTCAGTATAAAAAGCACAGCTATTGGCTATAGTGAAGGAATCTTTTCTCAGTTTTTATGGAGAAACTGAAGGGATAACATTCTGACAAGTAGGCTGTATTAAGAGCTCTGCACAGATAAGAGGCCTCTATTTATCACAGACAACACACTTACAAACAAGGAACAGCTGGAATGCTATTGATTTTATTTTTCAGAGAGTCATTAATTCTCTTAGGTTTCTGTTAAGGGTTTTAGTCATAACTGTGCATAGAAAAAGAAATACCTTGCTTTATTAAAAAAAATGAAGGGGATGATGTATGGTAAATTATGTTCTGATAGCCTCCTACAGTAGTTAAAACTGACAGTAATTGGAGTCTGTTTTCTTCTTATCCCAGTCTTGGACTGGTATTCCCTTTTTATGTTCATCTATGTTATTCTTCCCCTCTTCACTTTATTTTAGACAATTAGTAATATGCTACTAGCTTTGTGACCCTGTAGTAACTTAAATAAAAAGACCATGTTGATCTAGGGTTACCCAGCAACTCCTGCAGCACAGGCAGGGGGGTACCCTTTCAGGAATAAGGGGAACTGACTCCTGAGAAATAAACAATGCATTTTTTTCCCCATGAACGGTGCTGTTCTGAAGTCTTCAAATTTTTCCCTCTTATAGGAAGCAGTGTAAATGTTAATTTAAAAAGAGAGAGAAACTAAAATTTCTTGAAACATCACTTCTCCCTGAGTTGTAGTGAGTGTAATTCACTTGTCACCTCAGTGCTTTACAGTTTGAAGTGGTCATTTACCTGATGGTTCCCACAAGCCTTAGGCTTTACAGGGTCATATCATTGACTTAAAGTGAAAAATTTATTTGTGTTACATCTATAGAGAGCAAAATAACACACTCCAGAACTTGCAGTTGTAGTATTAGTTATACAGATTTGGGTGTTCTCACCACCCATGGGATGCCTGCTTCTCACTACAACCTGTTGTCTGGACATATGCTTACGTCTTATTCTCCTTTTGGCATGTAGAAAGCTGTTAATACAGTTTAAGGCCAAATTGTGTGTGGCTTCTATATGTAGATAAGATGTTTTGGCATTCTTGTCCGTTTCATTTATTTTTTTAAATGTACAAAAAATAGCCTGTTAATTGTTCGTTCAAGGCTACATTTCTGTTTTTTGTTTTTGTCTTTTCTATCCTACACTTAGTTGAACTTTGTGGAATTGTGGTGTTGGTTTTGTTTATACAGCCGGATTTTTCCCCCTTTTTGTGATGGTCTTCCTTGGTTCTTTGAATTGTACTCTTCTTTAATTTGTTTTTTTCTCTTTGGTCTCATTTATTCTTCCCTCCACCCCCAACCCTTTCTTTCTTTCTTTCTCTCTCTGATTGAGAGGCATTGAATTATGTTTTCAGTAGTACAGGCTTCTTGCCGATATGAAGGGAACTTTTCAGAAAGAGACCCACTCTGGGTCATTTAATTTTGAATACAGTTTTCAATCGTTCAAGTTTTGGATGGTTTATATCTAATGTGTGTTTCATTTTTTTGGAAAGCTATATTTTGTATTTAGGAAATGGTATACTATTTTGCTATTTGTACTGAGTGAGTACATTGGCATAAATATAGAAATTTATATATATACATATATATAAACTATTCTTTTTTTGCCACACATTTTTGTGGTAAATTTGTGAGTTTGTCTGATGTTCTACCACAACGTGGCGTCTGATAAAAGTGAGGGGGGGGGGGTTTGTTATGTCTTTACTGAGTATTTAAGTATCTTTTGAAACAAATGACCTGTTCATCTGTGGCCATTCCATCAGGCAGTTCCTTGATGTGATTAGTGGGCTAAAGTCAGCTTACTGTGTGTTCGCTGGATCTTACACTCAGCAAAATGTTCAAGTAAGGAAACCCATCTAGGCAGTTGTGTCAAATGGTGTTTCACAAGAATGAGCCATCCAGTCTTTGCTCACTATATATTTAATATTTTATTATTGTTATTGTTATTATTAATTGGCTTTCTGTATTCTATGCCTTTTATTTATAAAGACACTAAAAAAAAAACATGTTTGTAATTTTAATAACATTTCCCCCATCTTGTAATATCCAGAGCTACTTTATAAATTCTCTAAACCAAAAGCATTTTCATATATATATATATATATATATATATATATATATATATAATATATATATATCTCCCCACCCCATCAGGAAAAATTACCCAGTATAGTTCAGGTTATGAGAAGGACCAGCCACACAATCCAGTGCTTCAGTTTTAAAATGGATAACTAATTACAGAGGATTGACTGATGTTAGAAAGCTTATCCAGTGGTATAAAAATAAGTAGAAATAAAATGCTATAAGTTTATTTCTGAGTTTTCTGAATTTTTTCCCGAGAGATTACACAGGAGACTCAGGAAAGTCTATTTGTTCATCAAGTTCCACTGTTAACACTGCTCTATGGGTGAAGTGGTGGCAAGAAGACTGGCTTGTGTGCTGACTTCTGTTATTTAGCAAGAAGTTTATCATTGTAAAATGCTGATTGCCAATGCCAAGTCACCAGGGACCAATTTTGTGTTTTGTACTATCTCAGTTTAGAACAGAACATACACCTGAACTGTAGTGGTTTGATTGGATGGAGGCAGAAAACCCAACTTTTATTTTCATAAATTTTGTGGTTATTTGTACAAGGGCTGTGCTAAGATACCATATTCTTAATTCAGTAATGATTTTTTTTTTAACATTGTTAAATGTTCCTTACTGCTAAAAGGTCAATGTTAAGTACAGCATTCAGAACATATTATTTGGTTAAAAAAAGTATTTGTCTTCTTATTGAAGAGCTAGCTTAGTTGTCAGTGGTTGATACTTGTGCTAATAATACAGATTCAAGATTACTGTTACAAGTTACATCTATATATGAGAGAGATTCCAAGAACCAGCAGAGTCCTTGGAAACAACAATTCATTAAATTTACTTATGGCAGAAGGACTTAAGTGAACTATAAACCACATTTTATTCCTTTATAATGTTACATTCAATTGTTCTTGCCTTTAGGAACTCACATGAATGCTTGGAGCTTATCTGTATGTCTGCATGTGTGTATGTATGTGTGTGTTTGTCCTTTATTCCTTATTGTCATTCCATTATATATCTACACCAACATGGGAGAAGTTGTATACAACAATTAAAAGTTATATTTTGCTTCTTAGCTTTATCTTGTTACCTTTGTAATTAGAGTATTATGTTGTTATTTAACCAATGCAAATCGGTTTTTGCCAGTCTCCCTAGAACAGGTTTTTAAAGGGCTTTGTTTATAATAGAAGCAGTAGTATGAGGGACCTTCCTTCCTTTCTTTTTTGTAACATTGTTTATGCTGTAGTTGGGAATTTCATTACAGTGCATTTTTTGCCCATCAGAACCTCAGTTAATCCACCTAGGAAAAACTGTGTCAAAGGGAATGAGAAAGAAACTATATCTAAGTCCTCCTTAGAACTAAGAGAATAATTCCTTTTGACCATTTAAGCCATTATAAATGCTTATTTTGGAAAAGTATAACCTGTTTAGATGCATCAGCAATTATAGACCAGAAATTAAATGCTTAAATTAAAATTAATCAAAGCCTCAAAAATCAATATGGTTTTGTAAAGACTCACTGGGAGTACTTGAGAATTTTTTCATCTTTCTGGTAAGAATTTCTGTTTTAGTATTTGTTTTCTAGTTGATTATTTTCTAACTAATTGAAAATTATATTAGACCTATTAGCTTCTGACCATTCTGCTTTATGACCACAGGCTTCTTCCCTTAGACAGACAGCTATGTTATATCTGCATGCCTTTGTTTTGTGGAAGGACTTAATAAAAGAGTGTATAGTTCAGTGGCTTTATTAGAAAAATGACTTGGAATATATATACCCCAGTGAATGGGGTAGTATAATCTCATAACATGTATTAAAAAGAGGTTTTCCTATCTGCTTATTTGTGTCACTAGAGCTAAATAGTGAAGATGATGTTCATAATGTAGTAAATACCAGAATAATACCTAAAATATCATCTGTGATTTGTCCCAGCATTCTAATTACTTCTTTAATCTCCCTTTGTTTTTGTGTCATTCTAGCCTCATTTATTAATATAAATCTATTTTTACTCCACTTTCTCTTTTAGGACATTTTTTAAATTAATATTTTATATCTAGATTAAATGCTTATGGAAAAGTGCCTTTTTACCATGATAGTGCCCCTTTCTTATAATTTCATTTTTCATTGTTGCCAAAAACACATAGGCAAATGACTTTAATAGTCTCGACTTTCATTTTTTCTTTCTGGTAATTCTTTTCTCCATTTCTTGATCACCATAGAAAAGTTTCAAACCTTCCTAACGCCCATTGGCAGAAGAGGAACAGAAAAGATAAATAGCTAGGATTGTTTCTTTGAAAGAGGATAAGTAAAAGATCCTCTTTTAGACTTTATATAAATTAGATAAATTTGTCTTCATCCTGACCAACTGTCAAAAATTTTACTATATGTGAGACTATGGCTCAAATGGGTATGGTTAACTTTCAGAAAGGAAGTTGAAGCACCTGCTCTGCTCTTAATTATAAGATGGATGAAAATAAATCAATAACACATAGTTTAGGTAAAGCTTGGTAATGTCAGTTTTTCTAATGATAGTCAAATAATTCATTGTTTTGTGCCTCTTGCCCATCAGAACCTTAGTAATCTGCACATGAAAAATAGTTGCAAAAGAAATGAAGTTATATCTGAGTCCCCCAGAACTAAAATAATTCCTTGCAGCCAGATAGAGTTGGATAGGGTGTCCCTCTGTTCTGCTTTGTTTTGTTAATTTTGCCTATGTTCCAGCTCCTCACCATAGTGGTGGTGCCTAAAGAAAGGGCCATCAGCAGCAAACAGGTCAGGATAGTAGTGACTTAGAGATAGAGCTGCTTTCCCTATGTGAGTATTTCCATGACTGTTGGTGGCTCTAAAGACTGCAGATCTTTATGCAATATTCTCAATACCCTAATGATATTATGCACTTTAATCATTCCAAAGAAGTGAAAAATGCTGTATAGTGATGATTCCTTTTGATGAATACATTTTAACTGTTTAGAATATTTATGTCCCTTTTTATTTTGGATAGCCAACTTGGTATGTTATGGGAATATTTTCTAAAATGACTGTATAGTAGGACTTACTAAGGCTTTGAGATGTAACTGACTATAAGGGGAAATGATTACACTTCAGAAAATCATTTTAGAAACATTAAAATGTTCAGCTTGCTAATCTATGTGTTCGAGAGTTAATTAACCAGCTTTCTTCCTATATTTTTTTCATATTAATAACATAGTATATAGTTTTCTACATGTATGTATAAACCATTGGTTCTCAAAATGTGGTCCTCAGCCCACCAGCCAATGTCTATATCACCTGGAAACTAGTTAAAAATACAAAATCTTGGGTCTTATTCCAGACACAGTGAATCAGAAACTCTGGAGTGGGACTCAGCAATCTCTGTTTTTAACAAGCCTTCTGTTAAAGGTGATTCTGATCCATGCCAAAGTTTGAGAACCACTGGTTTACAGTGTATACAGTAAAATGTATTAATAGAAAGGGCTTTTTTCCCACTCACACAGTTATACATTGTTCTAAATGTAAATTCAGTTTAACCTGGTTATCTATAATCATTTCCTGGTAATGATAATTTATTCTCAGTACTACCTATAGAAATATATTTTATGTACATATACAATTAGTCCAGTTATTGATAATTCAGTTAACTTAGTTTGGTGTATTCCTACCACATACTAAAAAGTTTACATTAAATGACTGATTTAAATATATAGGTGCAATGGTCTATATTTTTTATTTTAACTATGGTGACATTTAAGTAGCTAACATAATTGACGGGTGCTAAAGTCTCCTGTTTATCCATAAAATGGGTACATTGTGGGCAGTGATAATACAAGCTTCATTTTCATTGCCTCTTACCTTACCAGCAGACAACAGTTTTGTCCTGGCTAGACCAACTCTCAGAACAAAATTATTTGTCATTCCTTATATTTACATTTGTATCTGAGCTATTAAACAACATGGCTAGCCAGGTCAACAAAGCACCTTATTTAATTTCTTTTTTTAATAGATAAATCTTCTTTTAAAATAGCTTGCTTTACATGAAAACTGACGCACTGGAAATGTAACTACCCTTGGTTGGAACTTACGGTTCAGATGAGATGTTAAACAAGACACTGTGTTATTTAGTTTAGGCATTTCTCCCTTTCCAATTATATACAACTAACCATAAGATAAATAGATTTATTTATACATTTTAATCTCCCTCTGTAATTCAGTACCTCCATAATTGCTGATGTTTACAAATCACCGATTACTAAATTCATGAAAGAAAAATGCACATTTCAAAATAAATCACCACTGCTGTGTTTGCTTAATAGTAGCAGTGGAAATGTAAGTGGCTTACTCTACAAACTTTGGTGCTGGAAATACATAGGCAAACTGTTGGGAGATGCTCTAGCTACATTCCTGCTTTCTTGTTCCTGTTACCATCTTTACCACCTTATTGCATACTATATTCTTATTACGTAAGGCATTCTACCATACCACAATATTATTCAACTCCAACTTGTATTATTTTCTTTAAAAGTTCTGTGTTTAACCATATCACCATGCTTTCTTTTCCCAGAATTAATTTGCCTAATTTTAGATAGTTTGTATAACTATTATTATTTTAGCTAATGAGCCTCAGGACAGCACACACAAACACACACACACGTACACAAACATGCCTTCTCAGATGTTGGAGAGTGACTTTGGAATCAGATTAAAGAACTATCCTGCACAGAAGTGTTTATGACTTTCAGTGACAAACTGACTCCAGTGACATTGAGCTAATTTCTTTTGATCTAATGAATGTATCTGCTTCACCTTGTTCCCTTACTTTGAATTGATAAGCTCCAAGTATTTATTACTTTTTTGGGATACTTTTTACTGAGTTCATTCATTTGTTTTAGTCTTTTAATAAGTATACTACAGTTATTTCATTAACCTGTTCTCAAGTGGTTTAGCTACCATTCTGCCATTTAAGTTTTTAATTTAATTTTATTTGCTTGAGTACACTGATCAACCACTGAGCTGCCTTCTTCCATTGTCCTGCAATGATATAAGGGTTACATTTTTGTGTATATGGCTTTCATAGTTGGTATTTCAGAGCACTGACACCAGATACTTCAGTTTATTCTCTGGGGGAACTTCATTTGCATCTATGTTTTTAGCTATCTGTGATAACTTGTTAAATATTAAAAAGATATTTTGCTTCTATTGGAACATTTGTATACTCGCAACTATATTTCTGTAAACAGCTGCAGTCAAAAATAAAACATTGAAAGTTTTCATTTTGTAGTGGTTAACTGTCTTTTTTCCTCAGACTTTGCCAGTGAAGTCATATCTAAGAATGTCAGTTTTTAACAACGTGAATATGTGACTGAACTTAAAGTCATTAGGAAAAGGTATGAAATACAGAAATATTTTTAATAGTGACTTCGTACCTACTCTTTTACCAGGTAGTGTACAAAAGTGACTTGGTGTGATAGAATTTTTGTTTTACTTAAAGTGTTTCATGTTTAGTAAAATAATACATACATGTGGTGACAAGTTATGAATTGTGGAGGTGCTTTTGATGAAAACAAAGTCTCCCCAGCCCTCAGTCCCACATCCAGATGCAGTCTCTTTTTATTCTTCTGTAAGTTAATCATTCAGAATGATCTTAGGTGATTTACATGGGTAAACATTATTTTTAAAC EMBV3_21634 AAAATATTTGCCATGAAGGTGCTTAAAAAGGAGGAGAATTATTTATGCAGTTAGAAAGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30985 GGGCAAGGGTACAGAAGGACTCGAAATAACCTCCAGGTCTCAAGTATAAACACTGCTGCG Gene BVT0102_112393 + 0 NULL GK000023.2:13484072-13633331 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00136105 1 XLOC_082324 NonCoding TCONS_00136105 XLOC_082324 NonCoding NonCoding LOC100139627 23:13574290-13575468 i TSS101395 1178 2 TCONS_00136105_2 81 0.420203735144312 1 0 0.000115498279748629 0.000179131609548449 0.000502764412808626 1.05740503516604e-05 0.000649628769783751 0.000157900316907259 0.000440595991122581 1.00419692961627e-05 0.000120562348339232 3.14350088882381e-05 0 0 8.76860035846411e-05 1.59728536865496e-05 0 0 0 0 0.000736571828391665 4.27334712069391e-05 0.000373667624966918 0 0 0 0.000470525743926898 0.000526316061765137 0.000318324292726319 0 0 0 NM_001001159.1 TLR6 Bos taurus toll-like receptor 6 (TLR6), mRNA. 1e-25 122 74.77 0.17911714770798 NM_177402.4 SYT2 Homo sapiens synaptotagmin II (SYT2), transcript variant 1, mRNA. 3e-09 68.0 88.46 0.0432937181663837 0 noncoding CTCAGGCAGGACGGTTCTTCGGGGGCATGAGTCCACCATCTTCTTGGCTCGCTGACTTGCTGAGTCAAGTCATTATTCCTTGCCCCAACAACTCATCTCTCAATTACTGGCCTCTTGTGCAGTGAGCAGTATGAGATCAGACTTGGTAACACTAGTATAAAGTAATGATATAACTAGATAAAAAGGCAGAGACCAACTCAAGTTTTCCCTGTAAGACCTCAAACAAGGGGCTTAAACGCCATTCTGTAGACAAGTCCCTGAAGGGTCTCAGCTGGGAAGGAATAAGATTGGTGGAACGGTTGACAGTGATGAAGCTGGCAGGCAAAATGACCTGGCCATGTGAGCGCAAGCAGGAGGCTGGCTGGAAAGGCAGATGGGCAGGGACCTCTCGTGAGCAGGAGCCTGAACTGAGGGTAAGGTGGGGAACGGGCACACAGGTGCAGACAAGAAGGAGAGGCTGTGATGGGGAGAGAAAGAGGACGAGGAAGGGCGGAGGAGCAGACAGGGAAGAGAACTGGGCCGCACTGGTTACTGACTAAACACAGAGGGCAAGGGTACAGAAGGACTCGAAATAACCTCCAAGTCTCAAGTATAAACACTGCTGCGTGCCGTTTATATGAGAAGAATCAGGAGGAGGGGCAGATGGGTGACTGCATCAAGCTAATAAAACAACAAAGACAGGACTTCTCTGGGGGGTACAGTGGATAAGAATCTGCCTGCCAATGCAGGGGACACCAGTTTGAACCCCAGTCTGGAAAGATTCTGCATTTTTTAGTTGCCTCGGGCAACTAAAGGCCCATGTGCCACAACTACTGAAGCCCAGGTGCCCAGAGTCTGCAATCTGCAATAAGAGAAGCCACCGCAACGAACAGCCTGTGGGCCACAACCAGAGGGAAGCCCCCGCTCGCCGCAACTAGAAACAGCTCACATGCAGCAGAGAAGACCTAGCACAGCCAAAAACAAATATATAAATAAATTATTTAAAAAAAAAAAAAACAGAGAAGACATCATCCAGACAGAAATGACCAGAGGCAGAGGGAAATGCAGAAACAGGAGAAATCCACTGATGAAGATGTGAACGCCAACAAAGAAAATAGACAGATACATCACAGCAACAGGGGCTGGAGGTAGGGCTGCCAGATCCAATACAGGATGCCCAGTTACATTTGAATTTCAGA TCONS_00134130 . 3' 25650 TCONS_00134130 . 3' 26827 EMBV3_10068 ATGCTGCCCAAGCATAGAACTGAAGGAGAACTGTGAAAGGTGGCCAAATACTTCCATACC Gene GeneID:100335533|LOC100335533:XM_002696872:277_cdna Constitutive 0 NULL GeneID:100335533 22 GENE LOC100335533 NULL natural killer-tumor recognition sequence-like EMBV3_29177 AAACACTGCAGGAAACTCATCCACCTCCTGAGGCCAACACACAGCACATGACCCCAGCTT Gene GeneID:508408|STK36:XM_002685573:156_cdna Constitutive 0 NULL GeneID:508408 2 GENE STK36 NULL serine/threonine kinase 36, fused homolog (Drosophila) EMBV3_36856 TGTGACTTTGTCAATCAGTGCCACGATCCCAATGAAGCAGCCCATGCAGTGACTGAACAG Gene GeneID:540329|PPM1K:NM_001046474:195_cdna UTR3_Alt 2 NULL GeneID:540329 6 GENE PPM1K MGC137505 protein phosphatase 1K (PP2C domain containing) EMBV3_34993 ACTCGAGGAACACATGGACAAAATAAACAGGTAATTAAAAAAATGTCTCCAACTTCACTA Variant GeneID:535883|HIBCH:NM_001046413:39_cdna 733^814 4 EMBV3_25553 GeneID:535883 2 GENE HIBCH MGC137758 3-hydroxyisobutyryl-Coenzyme A hydrolase EMBV3_30405 GGGAGTCAAGTCTCACGAGGTAGCATCTCAGCAGTTCAGAGAGAAAAACCATAAATGCAG Gene BVT0101_054791 - 1 EMBV3_36440 GK000001.2:83846620-83860273 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00009009 1 XLOC_004565 NonCoding TCONS_00009009 XLOC_004565 NonCoding NonCoding - 1:83850352-83851071 - TSS6086 719 2 TCONS_00009009_2 36 0.171070931849791 1 0 0 0 0 0 0 0 0 0 0 8.01153548876941e-05 3.18384710812703e-06 0 0 6.54240916010986e-06 0 0 0 0 4.98673275283744e-05 0 0 0 0 0 0 0 0 0 0 0 XR_239284.1 CCDC13 PREDICTED: Bos taurus coiled-coil domain containing 13 (CCDC13), 1e-22 111 79.37 0.173852573018081 0 noncoding 0 0 0 0 -0.0223386018721699 0.891848399643133 0.0268373870599343 0.599836951305769 GAGGAGGTCCTGTAGCCCTCTGGAGTCTGGAGACTTGTCGCCCACAAAGACCTGCCTCAGTCTCTCAGCTCCTGAAAAGTTGGAGAAGAACAGAGTTTACCAGTTTAGTGGCCTATGGTTCTCCCTAACACAAGCTCTGATGCGTGACATTGGAGGGTATACTTATTAAGGATTCTACCAATGTGGTTCAGTTGGGTAGCTCAGTCCCTAGGATTTTATAAGGTTGGTTAAGAGATGTGGCCTTGAATCACTTTAGAAGATTAATCTGGGGAGTCAAGTCTCACGAGGTAGCATCTCAGCAGTTCAGAGAGAAAAACCATAAATGCAGTAATGCATCTTTATACTATTGATGCAGGCCCTGACAGTCCAAAACCTGGGAAGCTCATTTTTCTGTCCTCTCCTGCCCTCTCCTGACCAGAGGCAGGAAGTGCATGCCCCTGCAGCCACATGACTAGGAAAGATCTCCCCAGCAACCTAGGATGCCTCAAGTTTTAAAACATTGTTTCCAGGGACTTCCCTGATTGGCCAGTGGTTAGGACTCCACGTTTCCACTGCAGGGGGCATCTGTTCAATCCCTGATCAGGTAACCAAGATTCTGCATGCCTCATGGCACGGCCAAAAAACAAAACAAAAAAACACCCCACTGTGTCTCTAGACAAACATTGCTTATTAAAAAAGAATAATTTGATTAGGAAATTCAAATTAAAGTCAAAATGAGA TCONS_00001394 . 5' 8940 TCONS_00001394 . 5' 8940 EMBV3_15490 CAGGCAGCTCTACAACGTCTCTTTAAGAAGATCATGAGGGCCCATGGGGTGAAGAACCTG Variant GeneID:523154|GALE:XM_002685712:403_cdna 388^501 2 EMBV3_05716 GeneID:523154 2 GENE GALE NULL UDP-galactose-4-epimerase EMBV3_43704 CTGCATCAGTGCTTTGTTCCTGCTCTTCTTCTCGGCATTCCTGGTGGCAGACTCTCTGAT Gene GeneID:100337137|LOC100337137:XM_002700328:49_cdna Constitutive 0 NULL GeneID:100337137 X GENE LOC100337137 NULL patched domain containing 1-like EMBV3_07291 AGCCTGAGGATCAAGGTTACTACGGGAAATTTTTGTCCCTCCCCCACGTGAGACAAGCCA Gene GeneID:534518|CPVL:XM_002686872:102_cdna Constitutive 0 NULL GeneID:534518 4 GENE CPVL NULL carboxypeptidase, vitellogenic-like EMBV3_37950 ACAGAGAAGGGCATCCTCGTGCCTGAGAATTTGAAGGAATTCATGCCGCCAGGTCTCCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21810 AAGATCTGGACTGAAACCAGTATTCCCTTTGATGCTGTTGGAGGACACCAAATCCAAGCG Gene GeneID:616493|TSGA13:NM_001076426:33_cdna Constitutive 0 NULL GeneID:616493 4 GENE TSGA13 MGC128045 testis specific, 13 EMBV3_29785 CATTACGGTGCGTGAAGGCCAGACCATCTGTGTGCGTTTCTGGCGATGCAGCAACTCTAA Gene GeneID:515594|PRMT5:NM_001105374:152_cdna Constitutive 1 NULL GeneID:515594 10 GENE PRMT5 MGC140182 SKB1 protein arginine methyltransferase 5 EMBV3_08402 TCACTGTGTGGCCATCTACCACTTTGAAGGATCCAGCGAGGGCACCATCTCCATGGCTGA Gene GeneID:100337179|LOC100337179:XM_002688905:185_cdna Constitutive 0 NULL GeneID:100337179 7 GENE LOC100337179 NULL thyroid hormone receptor interactor 10-like EMBV3_15101 GACTGTCTTCAGTATAGCATCCTCAGAAGAGAGGAAGAAAGCCTTCAGCACATGCATCTC Gene GeneID:516904|LOC516904:XM_002693399:56_cdna Constitutive 0 NULL GeneID:516904 15 GENE LOC516904 NULL similar to olfactory receptor 564 (predicted) EMBV3_40900 TTCGGTGTGGACATAGGGCCTGTCTGCTTCTTGTAAAAACCCGAACCCAGAACCAACACA Gene GeneID:407142|COL2A1:NM_001001135:61_cdna Constitutive 1 NULL GeneID:407142 5 GENE COL2A1 CB11 collagen, type II, alpha 1 EMBV3_07951 GATGTCCAGAACCGTGTTACCACATGGAAAACAAGTTGGGCAGCTAGTCAATGGCAGTGG Gene BVT0102_015929 + 0 NULL GK000005.2:89917360-90720434 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195870 TCONS_00195868 TCONS_00195869 1 XLOC_118161 Coding TCONS_00195868 XLOC_118161 Coding Coding PDE3A 5:89550806-89920848 j TSS145866 10134 1 TCONS_00195868_15 979 0.0362147227156108 17 0.972659786347999 0.00380316004030269 0.00403924909821628 0.00258732867354901 0.00184235388817105 0.00202035089872714 0.000517945238589293 0.00192039674048996 0.000935563690403332 0.000372760987287017 0.000653849133594214 0.000173142272800462 9.87598153705766e-05 0.000167360662854689 0.00200118028627556 0.000886508873324497 1.5334171180144e-85 0 6.48118716845975e-77 0.00294194919892269 0.00293468939682361 0.00105232291364126 1.49768058285281e-28 0 0 0.00277413750756786 0.00148963905317813 0.00140184827176927 3.66882715844089e-05 1.70049212625144e-49 9.71489496313434e-06 XM_002687752.2 PDE3A PREDICTED: Bos taurus phosphodiesterase 3A, cGMP-inhibited (PDE3A), 0.0 1.156e+04 100.00 0.632129465166765 NM_000921.4 PDE3A Homo sapiens phosphodiesterase 3A, cGMP-inhibited (PDE3A), 0.0 6066 80.64 0.632129465166765 TCONS_00195868_15 sp|Q14432|PDE3A_HUMAN PDE3A_HUMAN cGMP-inhibited 3',5'-cyclic phosphodiesterase A; 0.0 1576 91.60 0.917262512768131 0 coding 1 0 1 1 -0.220090369938201 0.127636343033433 0.0285164947784571 0.702785712777347 GAAGGGGACGACAAAGGATGAAATGGTTGGATTGCATCACCGACTCAATGGACAGGAGTTTGAGTAAATTCTGAGAGTTGGCGATGGACAGGGAGGCCTGGCATGCTGCAGTCTATGGAGTTGACTGCAAACAGTTGGACGTGACTGAGTAACTGAACTGAACTGTCTGGAGAAAATGGACAATTTTTATTTCTATGTGGTTGCTCAGTGTCCACTTTACGTGTTGGGTTTGATTTCATTTAATATGTTACATACACTGCTAGGCACTTCTTTCAGGTAGTACAGCTCTGCAACTTTTGGCATCTACCTAAGAAGATTTTATTGTTTTCATTTCCCTGCCTCCAGATTCTGGATGGTAATGCCAGGAGAGGTGGAATCTACCTTCTTTTCTTTTGGTAGAAAAAATAATTTTCTGGTTGTGAGGCTTACTGAGATTTTGGAGAAACCAGGACACTGCCTCTATAATACAATGGAACATTTCAAGAATGTAATTAAGATACAGACCTAGTGTTTCTGTTTTGCTGCCATTAACAGATGCCATTCTTATGTTCTCCTGGTCACAATGTTTCTTTCATATCTACATTCCATCTCTTACAAGTTCAGTTTTTATGGTGATTTATTGTTTTTTTCCTAAAGAACTGAGATGCTTGTGGCAGTAGGGTACAGGGAAAAATGGAAATACTCTAAAATTCTCACTATTCCTTTCTTGCTAATCTTGATATATGCCCAGATCTTAACAGTTTTTCATTTTAATATGCTCTTCTTGATGGCAGTGAATTTCATCACGATATTCCAATCAAGGCTTTTCACTCAAATGTTTCAGGTAGGCTCTGGCATATGAATCATATGTCTAAAAAAGAAAACTCAGAAAAGCGGCAGGCTAGGGGCTCATTTGTCTTTGGCAAAGAGATCGTTGCTCCTGTTTAATTATTAAACAGATGGTGCCCACTGCCATTGACTAGCTGCCCAACTTGTTTTCCATGTGGTAACACGGTTCTGGACATCTGATGGAGAGAAGCTGTATTATCACAGTTCCTCATATCCACTTACACCCTGATTTAAGTATTAACATCTGCCCCAAACTAAAGCAGGCTGTTTCCAACAAAGTTAAGCTTCAGTTTTAAGCTAACTTCTCCCCTGTCTCATGAATTTTCTTTTTCAGTATCTCCTTTATCTTTTCTTTAGATTGCTTTATCTCTACACATAAAATACAATAGCATATTGAGCCAGTTGGGCTTCCCTGGTGGCTCAGACGTTAAAGAGTCTGCCCACAATGCAGGAGATGTAGGTTCCATTCCTGGAGAAGGGAATGGCTACCCACTCCAGTATTCTTGCCTGGAGAATTCCACAGACAGAGGAGCCTGGTGGGCTACAGACCATGGGGTCACAAAGAGTTGGACATGACTGAGAAACTAACACTTTCACTTTTTTTTTTTTCACTTTCATTGAGCCAATTATCCAAATACTCCAGCTTCCACACACACTTTACCCTGGAATGTTCAGATAATTAAACAAAATTGGATTATCTTTATTATTATTAGTGAGGGCAAATTACATTTAAGACAGCCATATTAAAAATTAACAAGAGTGGACTGGTCTTGTGTTCAGTATTTAAAAAAAAAACAACTTTCCACACTGATGGACTTTTTAAAAAGATACTATTTTTTCATAATCTGCCAAGAGTTAGCTTAAAATTTTTTACTTTTAGTTTCTCAAATTCAACATTATTACAGCGTAGGAAACGTGTAGCCTATAAACATGAATAACTAGGGTCCTGGTTTTTTTTTTTTTTTTTCCACAAGCTTTTTTCATGGTAGACAATTTCACCATAGGCAGCTTTTAAGATCTTTCCTAGTGTTAACCTACCTGTTCTTATCCCCCCACCCCCACTTTGAGATTTTTTAAATATTTCTGATTGTTTGAGCTTCCTTACTTTGTACACTTCTCTGAGGCTAGGGCCACTTAATCTCAATGTAATTTACCATCCATCATCAACAACTGTTGACTAATACTCTCATACACTGTATTTTTTAAAGTAACAACAATAACAAGAGAGCTGTCCCCTTCCCCCTTCTCTTTAATAATGCTATTTGAGTCTAGGTAACTTGTTGAAATTTTCCATTGTTTGGACCAACAGGAAAGCCTAGGTTCTCTGTCGAAACAGACCTTCCAGCAGGAGCAGTCAAGGCCTTACAATGCCCCCTGACATTGATTTGCTGTTGGACCTGACTTGAGTCTATAAGCATCTTTGAATCACCCAGACAGTAGATGTGGCTGTCATTTTTCAGGACAGTGGGAAGTCTGCGGACTCCCCTCTAGAGATAAGTATCCAAGCACCATCCTTTTTTCACTCCAACGTCCTGGGCAGCCCTGTGTGAGGGCCAGCCTGAGACCCTGGACCCCGGGGGCTGAGAGTCCGGCGGTGGACGGGTCTGAGCCACTCCTTCCCTAGGATGCTGGCAGAGCAGCCCGGCTCGGCTCCGGGGAAAGAAGCTCGAGCTAAGAAGAGCGCCTCCTCCGGGGAGGGGCGGGAGCAGGGCTGGGAACGCTTTCCTAGGGAGTTGCCTTAAAGAAAGCAAGCGGGATTGCAGATCACTCCAGCTGCCTGCTTTTTTATACAGTTTTAATCAGTCGTCTCCACTCTCCTCCCTTCTGCAAAACTGCAAATCACCATCAACCCCGCACCAAAAAGAAGGAAAAAAAAAAACTGTAAATCTCCTTCTCCTTTCTCGCCCTCCGTTCCCTCCCACCCTCCCTTCCTCTCCAGCTCGCTCGCCCTCCCTCCCTTCCCTTGCGGCAGCCGCTCGTCTCTCCAACTGGGTGTCTCTCCGACGGGACTTAGCAACTTCTTGGTTATTTCTCAGCCCCTTTTCCGTTTTCACCACCTTTTGCCATGAACTGGACCGACAGACGCAGGAAAGGCTGTGCTTTCTGCCCCAGGGAATGGCGGTTCGCTTCCTGGGGCCGGGTCGGGGAGGATCGGCCGAGGAGAAAGAAAGAGTGATAGAGAAAGAGCTGCATTAAGGAGAGGAAGGGGGACCTCCGTCGGCTGCGGGCCCCTAGCGTGCAGCAGCACCCAGGATGGCTGCGAGCTCGCCCCGCGTCCCCGGCTCCAGCTGCGACCCCCGCACGCCGGACGCCTAGGGCGATCTTTAAAATCCTGAAGTCCGGAGAGACCCCGGAGGACCGAAGACGGGGGTGGGGGTGGAGCGGAGAATGCTGCAAAGCTTTTCCAAGAGAGAAAAAGAGGAAGTCTGATCGCTTCTGCCTGTGCTAGCTTTTCACTGGAAGGCGTCTCTTTGGAGCATCTAGCCTTCTCCAGGAGTTATTCGAAAGCTGAAACTTTCAGTGCTCGCGGGCCTGGGAGCAGGAGGGATTCCGAGGGTGGGATTGCGAGAAGAGCGGGCGTGAGCGCGCGCCTGTGTGTGTGTGTGTGGCGGGGTGGGGGCGTCGGGGGGGCCCTCGGGGACTCCGCGAAGAGGGCGCACCATGGCTGTGCCGGGCGAGGCCGCCCGAGTCGGAGCCACGCCGGGCCACTGGGAGGCCAGGCCGGCCCCAGCGGCCGGCCCCGCATCGCCCCGGGACGTGGGCTGCCGAGGTTGCTGGGGCGCCCGGGTTCTGCGGCCGCTCCGGCGCTCGCGGAAACTTTCCTCGGCGCTGTGCGCGGGCTCCCTGTCCTTTCTGCTGGCGCTGCTGGTGAGGCTGGTCCGCGGGGAGATCGGCTGTGACCTGGCGTACTTGGCCGGCGTGCTGGGGATCCTCCTCGCCAGGTACGTGGAGCAGATCTTGCCGCAGTACTCGGGGGCGGCTCCGAGGGAGCATTTCGGGTCCCAGCTGATCGCTGGGACCAAGGAAGAGATCCCGGTGTTTAAGAGGAGGAGGCGGTCCAGCTCCGTGGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGCATCCCCAGGGAACAGCTCATGGGGCATTCAGAATGGGACCACAAACGAGGGCCACGAGGATCACAGTCTTCAGGAACCAGCATCACTGTGGATATTGCCGTGATGGGCGAGGCTCACGGCCTCATCACTGACCTCCTGGCAGACCCTTCTCTGCCCCCCAACGTGTGCACGTCACTGAGGGCAGTGAGCAACCTCCTCAGCACGCAACTCACCATCCAGGCCATTCACAAGCCCAGGGTGAACCCCATCGTGTCCTTCAGTGAAAACTACACCTGCTCTGATTCTGAAGAAAGCTCTGAAAAAGACAAGCTGGCTATTCCCAAGCGCCTGAGGAGGAGTTTGCCCCCCGGTTTGCTGAGACGAGTTTCATCAACTTGGACCACCACCACTTCTGCCACAGGTCTGCCCACTTTGGAGCCTGCCCCTGTCCGGAGGGACCGTAGTGCCAGCATCAAGCTGCATGAAGCACCTTCATCCAGTGCTATTAATCCAGATTCTTGGAAAAACCCAGTGATGATGACTCTCACCAAAAGCAGATCCTTCACTTCATCCTACGCTGTTTCTGCCTCTAACCATGTAAAGGCTAAAAAGCAAAATCGACCAGGTTCCCTTGTGAAAATTTCACCTCTTTCCTCACCCTGTTCCTCACCTCTCCACGGGACCCCTGCCAGCAGCCCGGTCAGCAAAGTTTCTGCAGTGCAGTTCCCAGAGTCTTCCGACACAACTGCCAAATCAGGCCTAAGTTCTCACCGGGCCTTAACTTACACACAGAGCGCCCCTGATCTTTCTCCTCAGATCCTGAATCCACCTGTTATATGCAGCAGCTGTGGCAGACCATATTCCCAGGGGACTTCTGCCGACGGGCCCCTGGAAAGAAGCGGGGCAGCCATTCGGACACCAACCAGAACAGATGACATCACTCAAGTTACCTCTGATTATGAAACGAATAACAACAGTGATAGCAGTGATATTGTACAGAATGAAGATGAGACTGAGGGCCCCAGAGAGGCTCTGAGAAAGACATCATCTTGCAGCACCTACGCTCCGGAGACCATGATGTTCCTGGAAAAACCAATTCTTGCTCCTGAACCTCTTGTCATGGACAACTTGGACTCAATTATGGAGCAACTGAATACCTGGAATTTTCCAATTTTTGATTTGGTGGAAAAAATAGGAAGAAAATGTGGCCGTATTCTTAGTCAGGTATCATACAGACTTTTTGAAGACATGGGCCTCTTTGAAGCTTTTAAAATTCCAGTTAGGGAATTCATGAATTATTTTCATGCTTTGGAGATTGGCTATAGGGAAATTCCTTACCACAACAGAATCCATGCCACGGATGTCTTACATGCTGTTTGGTATCTCACGACACAACCTATTCCAGGCCTCTCAACTGTGATTAATGATCACGGATCAGCAAGCGATTCAGATTCTGACAGTGGATTTACACATGGCCATATGGGATATGTATTCTCAAAAATGTATAATGTGCCTGATGATAAATATGGATGTTTGTCTGGAAATATCCCTGCCTTGGAGTTGATGGCCTTGTATGTGGCTGCAGCCATGCATGACTATGATCACCCGGGAAGGACTAATGCTTTCCTGGTTGCCACGAGCGCCCCTCAGGCGGTGCTCTACAATGATCGCTCAGTCTTGGAGAATCATCATGCGGCTGCTGCATGGAACCTTTTCATGTCCCGGCCAGAATATAACTTCTTAGTTAACCTTGACCATGTGGAATTTAAGCATTTCCGTTTCCTTGTCATTGAAGCAATTCTGGCCACTGACCTGAAGAAACACTTCGACTTTGTTGCCAAATTTAATGCCAAGGTGAATGATGAAGTTGGAATAGATTGGACCAATGAAAATGATCGTCTACTGGTTTGTCAAATGTGTATAAAGTTGGCTGATATCAATGGGCCCGCTAAGAGTAAAGAGCTCCATCTTCAGTGGACGGAGGGTATTGTCAATGAATTTTATGAACAGGGTGATGAAGAGGCCAGCCTTGGGTTACCAATAAGCCCCTTCATGGACCGTTCCGCTCCTCAGTTGGCCAACCTTCAGGAATCCTTCATCTCACACATCGTGGGTCCTCTGTGCAACTCCTACGATTCAGCAGGACTGATGCCAGGGAAATGGGTGGAAGACAGCGATGAGTCAGGAGACACAGACGACCCAGAAGAGGAGGAGGAGGAAGCACCAAATGAAGAGGAAACCTGTGAAAATAATGAATCTCCAAGAAAGAAAATTTTCAAAAGGAGGAAAGTCTACTGTCAAATTACTCAGCACCTCCTGCAGAACCACAAGATGTGGAAGAAAGTCATTGAGGAGGAACAGCGGTTGGCGGGCATAGAGGACCAGTCCCCCCAGCAGCATCCCTCAGAACAGATCCAGGCCATCAGGGAAGAAGATGAAGAAAAGGGGAAGCAGAAAGGAGAGGAGACCCCAGCCCCAAAGCCAAACCAGTGACAATGGATAGGATGAGCTATGTTTCCAAACAGAGTTACTTGTCACACAGACTCTTTTCAAGCCAGCACAATACTTAGACACAACACTGTAGAAATACAAGAAGATGGGCAAATGGCTACGGCATTTTGGGATTCTTCGCATTTTATGTGTTTATTTTTACAGTGAGGTACATGACTTAAAAAACTCTCGCTCAGAGAAGCTTTCACATTGTAACACCAGCTTCCAAGGATTTTTTTTTTTTTAAGGAAGAAGTATATATGTGTGTGTGTATATAAGCTGTCACGTAGATCCATGTAAAACATATTCACAGACACACATGCAAACACAGACACACTGAAAGCTGGGATTCCTGGCCCCACAATTTAGTAACATTCATATTAAGATATATAGTGGTCACTGTGATATAATAAATCATAAAGGAAAACAAATGAAGGAAAACAAATCACAAAGGAGATGGTGCGGCTTAGCCCAGAAGCAGTACAGCAAATGAAGTTATGACTAAGGAGCGTTTGCTCTTAGTCCTGAGGGATGAAAGCTCCAGAGCGTTGTTTGAATTCTGATACATCCTGCCAACATTGTATGCGTGTGTGTGAGAGAGAGACAGAAGTGATGCTCAGGTGTATGTACATTTGTGTGCACTAAAGAGAGAATTGGCTTTGGTGGTTCACAGCATGGCTGCAGCAGACGACTCAGCACAGGTGAACAAACAGGATGAAGTGCACTCTGGAGTGTCTCCGCCTCTATCTGGCTTCAGTAGAAGCCCCTCTGCAGACGGAGGGAATTAGCAGGATGAGGGAGGGACAGGGCCACAGGTCTGGTTCTCCTGCCGTCGCCAGCCTTAAGCCCGGAAGACCGAGGCATTTTCCAGTCTAGTCGCCAAATGAATGTATACGAGCTGTTTGTGAGTATGTCTGCCATTCACCTAAGATCAATTCGCCATGGAAGGGGATGGCATTCTTTACACAGAAACACCTCAGAAGGAGCTGGAGTCAGGTCTTTTCATCAGGTGAGAATACTAAAAGGTAGCCAGAGAAGACCTGGGAAACGACTCTTCACTGGGCTCTCCCATGTCTTAATTTGCTGCAAAATGTGTGGTAGGAAAAGAAAGAAAGGAAGGCAAACAGAAACCCACTCTGGGATAGACAGTGAGAGATGAAGGGGAAAATTTTCAACCTAGGGTTTGGTATTTATTGACATAGTGAAAGCCTGATTCTTGGCGGCCGTTGAAGGTTGACTTTTAGTTGGCTAAAGTTGCACGGACAACCCTGTTGTATTCCATGAGGGGTGTGATGGGGTGGCTTGTATCTGCAGCCTGGCCCATTGTCATGTTTCTTTTGGCAGGGAGGACTCGAGAGGGATTTGGGGGATTGGGCCTATCATTGAAAGTCTTTTTTTTGTTTGTTTTTGGTTTGTTTATCTACACTTGTTTATGTTGTGAGCCAAACCTCTATTTAAAAAAGTTGATACTCACTTTCAATATTTTATTTCATATTATTATATATTTGTCATTAATAGTTATCTTGATGTAAATATAAAGATTTGTGTTTCTGTAGATAGTTAACTTTTTTTTTTAAGGGAAAAGGGAAACATTTTTATAAAGTTCTATTTTAATCACCATTTTTATACATTGTAGCTATCTCCAAACCCAGTAAGAGTGAAGGTTCATTTGCATGAGGTCTATGAACACCCACTCATCTACCTGTTCTAATTTAAATAATCATCTGATACAGTTATTTTATGCCAATTAAATGAGGATGCTGCAAACAACGTTTTTTCACTAGTAAGTAACTTCCGGTAACTCTTGGATCCGTGTCTCCCAAGCAAAAGACCGTCTTAATCCCGAATGTTTATAATCAGTGTCCCTTTCTTCCCAAGACTTTTTGCTCATAACTTTTCCTTCAGTACAGCACTATATTCAAGCCTGTTCATCATCTAAACAACCTTAGCTTCCAGTAAATCTAACTTGTAATTTCTACTTTTTATTTCCTCTGAAATCATAGAAAAGAGTGTTTACATTGAAATGCCTTTGTTTCTCACGAATGGATACTCTTCCCTTCTAAAACAATGATTATACAATAATCCATGGCATTCTTAAAGTAAAGCAAACATAGTACATTCAAAAATAAAGTTTCAAGGCAACTTTCCCAATAAGTAGGAAAATATGAAAATGATCAGATGGATGTAGGTTCTACCTAAATGAGATTTATTTTTTTTTAGTCAATACCAGGTCTTCATTATTTAGGACTTACTGAGTATTTTCCCCCTTGTCTTGCCTGTGTGTCCCTATGTTTGCAAAACTTACTGTGAGTCAAATACATTTCCCAAGCAAATTTAACTATTTTCCTTTCGTTGCAAATAACAGAAGGATTTAGAAAAGCACTTATATTCACATACCTCTTATATCTAATTACTTAACAAAGTTAATCTTTTCCCCTGCTCCAAATACCATAAATATAAAAGTCAAGGGGAAAAAAAGGTGTTGAGCAAGTTGAATGGCAGCAAAATACTTCTAAATTCATAACCGTGTATTGGTGGTTTCATCAAAGCTTGGTAACCCCAGCTAGGAGCCAACCTGGCTGCCAGAGTAGACGTCTAAGCACGTGGCCTGATTTTCGTTTTGTTTAAAGTACGTGAAATAATGATAGCTGAAGCAGTGAGAACCTCTTCATTCCAGAACTGTGCTCATTAGTCCAGGCAGATTAACCATTTGATCTTCCAAGATAAATTGCCCATGTGTTAAAGCTAAAAGTCAGTTCAAAAAAAGGAATGGAGATTCATCAAGTGTGTAACTTTCATACGACCCCTACCTACATCCCAAAGGATGCCGAGGGACATGAAAAGATACTTTCTGCTAGTGATGGTCTCCCTGTCCTTGGCGACAAAAATATTACAGTGTTCCCTTCCAGCTCCAAAGCTTACTTCCTGTGGTGCCACTGTATTTGTTGCAATTTACTACATTTTTATATGAGCCTAATTATAGGTGCCATTAGATAAACTCAGGTCTTACAAATGAAGGAACGTCCAGCCCTCTTACGGAAAAGGAGAATTGTATGGACAGCCATGAAGTTAATGGTAGGAAAAGTAGGAATTGGTTACCTTGATGCTTGTGGTCGCTCCCTGTTCAGTAAAAGACCAGGTATACTAAATATGTCACCAATATCATTTCCTGCATGCTGATAGAATGTCTTTCTGGTTATCAATCTAAGCCAACCCTGAGGATATATTGTTTCCTTGGTGAAAACACCACTTTAGCATATTTTTAAACTATAATTTGTTTTTGTAATTTACATAAGACCTGGTTTTGCTCTTAGTCGAAAATGAAGACAGTAGCTCTGTACAGGGATTTATCTATGTTGGTCTTCATCTGAGAAGTGAAGGAATTTCCTCATGTTATGTTTAAGAAAATATCTACTTTCTAAACACAAAAATCCCCATTATGTCTGTTCTGTTTTGATGGAATTCCTGAACAAATCCTAACCATTGCAGTCCCAGTAAAACTAAAGATAAGGCATTGTATGTCAAGTAGGCTTCATTGCACGTATGTATTGTCATTTCCTCACGCCCTTGCCTCTCTACAATTTGCAGTGTCCCGTGTCACCTTCCCAGAGAACTTTCATTGAAGGTAAAAGCTGTGCAAAAGGCATGAGACTCAGGCCTATTCTTTGTCTAAATGATGAAAAAAAATATAAATTATTTTCTAAGTAA EMBV3_25152 AGTCAGAAACAGTCAGAGCCGAAGAAGACAGAGCTGAGAGCGCACAGACACGCTCCCAAG Gene GeneID:100335514|LOC100335514:XM_002692834:195_cdna Constitutive 0 NULL GeneID:100335514 14 GENE LOC100335514 NULL hypothetical protein LOC100335514 EMBV3_37558 TGGAACGCCTTGCACCAGGCTAGTTTTCAGGTGCAGATGTCAATTGTCAAGCCTTGGACA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42776 AGATCTACAAGTGTCTGCAAGAGGACCCAACTCCACCACCCCCAGAGCAATGTCAGCAGT Gene GeneID:521214|LOC521214:XM_002687678:2_cdna Constitutive 0 NULL GeneID:521214 5 GENE LOC521214 NULL similar to MGC152498 protein EMBV3_38216 GTTTGGAAGCCATATAAAACTTCTCCCATACACGCAGAACCCCAGAACTCCCCGCCTAGG Gene GeneID:539579|PKLR:NM_001076176:189_cdna Constitutive 0 NULL GeneID:539579 3 GENE PKLR NULL pyruvate kinase, liver and RBC EMBV3_35685 ACTGAAGAACCCAGAAGCATAAGGTTGCCTTCCTCCTCACCCTGCTCACTCTTACTCGTG Gene BVV0102_100110 - 0 NULL GK000019.2:34538829-34575189 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19772 GACAGTTCTGCCAAAGTATAAACACGTGTATCCTAAGAGCTGTGTAGTGGGTAAGAGCCG Gene GeneID:785361|LOC785361:XM_002694920:805_cdna Constitutive 0 NULL GeneID:785361 18 GENE LOC785361 NULL similar to nudix (nucleoside diphosphate linked moiety X)-type motif 19 EMBV3_12140 CAGCAAAATACAGCAACCAATATCCAATAGGTATTCTGCCACTTAGTGGAGTTTTTCAAG Gene BVV0102_290485 - 1 EMBV3_06731 GK000022.2:32641675-32651391 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00126651 TCONS_00126654 TCONS_00126658 TCONS_00126656 TCONS_00126652 TCONS_00126653 1 XLOC_077477 Coding TCONS_00126652 XLOC_077477 Coding Coding TMF1 22:32610042-32644223 j TSS94923 7133 1 TCONS_00126652_6 784 0.0513108089163045 16 0.791778818022235 0.000101532208420806 2.80183442666563e-05 1.58710688116431e-09 1.2736213935003e-08 0.000154893827961615 7.09681286261222e-06 2.45328769046463e-05 2.06762119117675e-05 5.71043827193403e-05 6.0415761140784e-15 3.99333586379238e-06 7.68987139236447e-78 2.51840139457909e-09 3.33518760739743e-06 4.04788546558938e-05 0.000374125115848795 9.21226368943937e-18 6.9690866868533e-05 8.11954344729691e-05 4.44721155635434e-05 1.87207034041215e-05 3.06786748998096e-05 0.000108784349091655 2.93856887601125e-05 9.81427267946967e-05 4.12656713148075e-05 3.97272350281692e-05 2.26230617155894e-54 4.63631246679639e-40 3.21053183408624e-05 NM_001206260.1 TMF1 Bos taurus TATA element modulatory factor 1 (TMF1), mRNA. 0.0 4396 100.00 0.341511285574092 NM_007114.2 TMF1 Homo sapiens TATA element modulatory factor 1 (TMF1), mRNA. 0.0 3294 88.96 0.351885602130941 TCONS_00126652_6 sp|P82094|TMF1_HUMAN TMF1_HUMAN TATA element modulatory factor; 0.0 1312 90.78 0.951530612244898 1 coding 0 0 1 0 -0.06964250670498 0.702157615236705 -0.0100100757045468 0.862238192497712 AGGCCGAGTTAACACAACTGTTTAAATATTTGAGAGAAGGCTTTATGAAAGAAATGCCATAGCCAACTTCCCTATTTTTAATGGCAATGCGCTAGCTCTTAGTACGAGAGCTGTTTTACAGGAAGGAACCCACTTGAAAAAACCTGCCTATTCCTCCCTAAGGCATCAGTCTCTGCTGGTTTAGCCACAGAGTTTATCCCGGGGCGAAGAATTTTCGCTGTACGCCTGGAACCAGTTTCAATACGAAGCGTTCCGCGTTCCTCGGTAACTATAGGCGAGCCTGCATTCCCGGAAGTGACGTCAACATTCTTCAGTTCTTCCGTCTATGGGCGGAACTCCGGGCTCCCGGAGTTGCTGGTTGTGTACGTGGAAGCAGCCAGCGCCTGCGCAGTTGGACCTGTCGTCTCAGCTGTGTGGGAAGCGGCGAGGGTAACATCTCGGGCTCGGGGGAGATCTTCGGGGTCATGGTTTCCCACTGACAGGGCCCGCCGAGTGGAGAAGCAGGCGAGGCTCTCCGTGCACCTTCCCCCGGGCCCCCGACCGTCGGCCTTTCCCTTGGCCTTCCCGCTCGGTGCTGCCGCTGCCACCGCCGCCAACGCCGGCGGTTGAGGAAGGGAGATGAGCTGGTTCAACGCCTCCCAGCTTTCCAGCTTCGCCAAGCAGGCCCTGTCTCAGGCCCAGAAGTCCATCGACAGGGTCCTGGACATCCAGGAAGAGGAGCCGAGCGCTTGGGCCGAGACCATTCCGTACGGAGAGCCAGGAATAAGTCCCCCTGTCAGTGGAGGATGGGATACTTCAACCTGGGGGTTAAAATCCAACACTGAACCTCAGAGTCAGCCAGTAGTCTCTCCTAAAGCAATTACAAAGCCAGTTCGGAGAACTGTGGTAGATGAATCTGAAAATTTCTTCAGTGCCTTTCTCTCTCCAGCTGATGTACAGACCATTCAGAAGAGTCCAGTGGTATCAAAACCACCAGCTAAATCACAGCGACCAGAAGAAGAAGTGAAAAGCACCTTACAGGAGTCCTTGCACACTGGACAGTCAAGAACAACTGAAGCCACTGAGTCAAAAGTAAAGGACTCTCCTCCATGTGTATCCAAGGAAACTCTGGCAGTCAGTACTCTGTCACCTAAAACTGAGGATAAGCACGAAGAAACTGTTACTAAAGAATCTGATACGAAGGTGCCAACAGTGCATTTGAAAGTATCTGAAAGTGTTATGAATGTGAAAACAACTAGGGAAAATGTATCTAATATGTCTACACAGCCTCTCACAGCAGAAACCAAGGACATGGCTTTGGAACCTAAGGAACAAAAACATGAAGACCGACAGAGCAATACACCTTCTCCTCCTGTTAGTACCTTCTCGTCAGGTACTTCTACCACTAGTGATATTGAAGTTTTAGATCATGAAAGTGTAATAAGTGAGAGCTCAGCAAGTTCTAGACAAGAGCATACAGATTCAAAATCAAGCTTGCACTTGATGCAGACATCCTTTCAGCTTCTCTCAGCATCTGCTTGTCCTGAATATAATCGTTTAGATGATTTCCAAAAACTCACTGAGAGTTGCTGCTCATCTGATGCTTTTGAAAGAATAGACTCATTTAGTGTACAGTCATTAGATAGCCGTAGTGTCAGCGAAATCAATTCAGATGATGAACTGTCAGGCAAGGGATATGCTCTAGTACCTATTATACTTAATTCTTCAACTCCAAAGACCAAAACAATTGAATCTGTTGAAGGAAAACCTGAAGAAGCAAATGAAACATTAATTATGCCCAATGAGGAAACAGAAATGGAAGAAAGTGGACGAAGTGCAACTCCTGTTAACTGCGAACAGCCTGATATCTTGGTTTCTTCCACATCAGTAAATGAAGGACATGCTGTCTTGGCTGAGGAGGCTGAGCAGCCTGAAGCTTCAAGTCAGCCAGAGGCACCTTCTGAGAAGGAAGATGTCTGCAAGACAGTTGAATTTCTGAATGAGAAACTGGATAAAAGGGAAGCTCAGTTATTATCTCTTAGTAAAGAAAAAGCACTTCTAGAAGAAGCTTATGATAATCTGAAAGATGAAATGATCAGAGTGAAAGAAGAGAGCAGCAGTATTTCTTCCTTGAAAGATGAGTTTACTCAAAGAATTGCAGAAGCGGAAAAGAAAGTTCAGCTAGCCTGCAAAGAGAGAGATGCTGCTAAAAAGGAAATCAAAAGTATAAAAGAAGAACTTGCTACTAGATTAAATAGTAGTGAAACGGCAGACCTTTTGAAAGAGAAAGATGAGCAGATCCGAGGGTTGATGGAAGAAGGAGAGAAACTTTCAAAACAGCAGCTGCATAATTCTAACATCATTAAGAAATTAAGAACTAAAGACAAAGAAAATGAAAATATTATTGCAAAGCTGAACAAAAAAGTTCAAGAGCTTGAAGAAGAGTTACAACATTTAAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGAAACAACATAGAGAAAATATTAAGAAACTAAATTCTGTGGTAGAACGCCAAGAGAAGGACCTTGGTCGACTTCACATAGACATTAATGAACTTGAAGAAAAGAACCGAAGTATTCAGGCTGCTCTTGATAGTGCATACAAAGAGCTTACTGATCTCCACAAAGCCAATGCTGCAAAGGATAGTGAGGCCCAGGAAGCTGCTCTGAGTCGTGAAATGAGAGCTAAAGAAGAACTTTCTGCAGCACTGGAGAAGGCCCAAGAAGAAGCCCGTCAGCAGCAGGAAACATTAGCAATTCAAGTGGGGGACCTTAGGCTGGCACTGCAACGTGCAGAGCAAACAGCTGCCAGAAAAGAGGATTATTTACGCCATGAGATCAGTGAACTCCAGCAGGTGAATCCCAGACCTTGTTGGCAGCAGCAGTTGAGAGAGAACGTGCGGCCACAGAAGAACTTCTTGCTAACAAAATTCAAATGTCTTCCATGGAGTCACAGAATTCTCTCTTAAGACAAGAAAATAGTAGATTTCAGGCTCAGCTAGAATCAGAGAAAAATAGGCTAAGAAAACTAGAGGATGAAAATAATAGGTACCAGGTTGAATTAGAAAACCTAAAGGATGAATATGTAAGAACAGTTGAAGAGACAAGGAAAGAAAAGACACTGTTGAATAGTCAGTTAGAAATGGAGAAAATGAAAGTTGAACAAGAAAGGAAGAAAGCAATTTTCACTCAAGAAGCAGTAAAAGAAAAGGAGCGGAAACCGTTTTCTGTTTCTAGCACTCCTACAATATCACGTTCAAGTTCAATAAGTGGAGTTGATATGGCAGGCCTACAGACATCTTTTCTGTCTCAGGATGAGCCTCATGATCACTCATTTGGACCAATGTCTGGGTCAGCAAATGGAAGCAATCTTTATGATGCTGTAAGGATGGGAGCGGGATCAAGCATTATTGAAAATCTACAGTCTCAGCTGAAGCTAAGGGAAGGAGAAATTTCTCATTTACAGCTAGAAATTGGCAATCTAGAAAAAACACGCTCCATAATGGCTGAAGAGCTAGTTAAATTAACAAATCAAAATGATGAACTTGAAGAGAAAGTGAAGGAGATACCCAAACTTCGAATGCAGCTAAGGGATTTGGATCAAAGATACAACACTATTCTGCAGATGTATGGAGAAAAAGCAGAAGAGGCAGAAGAACTTAGATTAGATCTTGAAGATGTAAAAAATATGTATAAGACTCAAATAGATGAACTTCTAAGACAAAGGCTCAGTTAACTTCTGCAAATTACATTCCCATCAAACTGAATGTAAACATTTAATATCTACGTGCAGATATCCAATAAATTCTTTTATAGAATTAGAAGGTGGAATTTACTGTAGTGTTAAAAAATTGAAAAAATTCTTTTATAGTGTATAGTAATATTTCCAGTTAAATTATTTTGTGCAATATTTGAACTTTATTTTTAAAACTATTCTTTAAAAGATTTATTTTTTAAAAGGTCTTTTTTTTTTTTTGCCTTGAATAGCACAGAGATTTATTACTTTATCCTCATATCAGTATGGTTAGAGAAGGAGAATGGTTCATATGTTGTATTGTAGATATATAACTAATTGTATCTATAATTTATATGTTTTTGTATATATTGAGAACATTTAAAGAGTTATAGTAACGTTGACACTTTGAAATCTTTCGCACTTAAATCTTCAATATATCTTAATTGTGATTCATGAAAATGGACATTGTTTTCAAGTAAAAAAATTACTAAATCTGCAGTTATTAAAGTTTTGAAATAATTTTTTTTCTTTAAAAAAAGTCTCTGAAGTTTAAAAGGTAAATAATTAAAACTTACAAATTTTTGTGATCTCAAGTTTTATTTCAGTCAGATTTCACAATTAAGTCTGTACAAACTTTGGTACCTATTTGGAGAAAGTTGTAGCTATTCAAAGTTATCTAGGCATAATTGAATAGTGGAAAAATCTACTTTAAAAGATTTTGTGATAACTTCATTAACATTTTAGTGGTTTTTGAAGAGGTATTGTTTTACTACCCTATAAAACGAATCAAAAGAAATAAAATTACTAATGTAATTTTCTTTTTAATTGTTCACATTTTGTAAAGTCTTATTTTTGGCACATTAAAAGTAAATGTTGACATTCATAATAATATTCATAACAAAATAGAGAAATTATAGGAGTTAAATTTGACATTTTGCAGTTTTCTGCAGTTTATCATTTAATTTTTTTCTTGGACCTTTAAAATAAAAAACTAATAGCTGAAAAAATAGCTATTCCTTCTCAGCTGTGTTTTAGACTTGTGAAATATTTTGATAGATTTTATTACTTAAAGTCATTTAGATGCCTTTACTTGAAAATAAGAACTCTGACTTAGTTTTTAGTTACATTTTAAACACTAGAACTTTAGAGTATAGCTAGAAGTAAGCCATGCTGAAGATTGTGGAATGCTTTTCAGGGCAATTCAAGTGACCTCATTTTTGTTCTTTTTGGATTCAAGACAGTATTTCTGTCATTGGATCTCTGATTTGTAGCATTAATAAATATTCTGTCAGTGTGAGCCAAATTCATGACATTAATTTTCTATATTTTAGCAGTAAAAAGCAGTAAAATAGCTTTTCTTTTTTTTTAATTATTATTAATATTAAGGGGTTGACAGAATAACAAAATTGATAGCAATAGGAAATTTACAAAATTAGAAAATACGGGAAATACAACTTGCAAAATTCTATCAAGTTTTTGAAATCAGAAGTTTAGGGATTATGAAATTGTTCTTTTATGGTATCCATTAATGAAGAGGGGAAAAAAACCTTCAGTGGAGAAAAGATTGAGATAAAATTGCTTTACTTTTTAATTTTATAATATTAAACATTCTCTTTTCTTAATCCTTATTAATAAAATCAATTCAACTTAAAATTTTATGGTGTTTTTAGTTTAATTTAAAAATGGCAGCAGCTATTTAAGTCTTTGACTGTATATTACCATATATTGTTCTTTATCCACAAATTAATAGCTGATATTTATACTGAGTTTGTTTCATTATATGTTTAGATTTTTCAATACATCTATAAATTGAGAAACTGTACCAATTGCTTTCTTGAAAAACTCCACTAAGTGGCAGAATACCTATTGGATATTGGTTGCTGTATTTTGCTGTTTGTCATTAAAAATTATCTATCCATATTCTAGAAAATATTTGTATTTTAATAGATAAGAAAATAGTTTGCAGTCAGATGTTTCCATTCTTGAAAGAAAATAGATAATACAAATCATAACAATGTTAAGAATATTAAAAAAAAGAGTAAAAGGTATGAACATTGTCGTTTCCATATAGACAAGTAAGCACAGATTGTGGGCATCCTTCTAACTCTTGGGAAGCTAAATTGAGAGTGCCATTTCTTTCTTTTTCTTTGCCTCTTTTTAGAGAACTTCCAGTTGTATAGTGTGTAGCATGTGGGGATGCATCAAATCTTTGATTTTTAAGATATTCTAAATATGGGAAATTTCTGACCTAGGGAAACATGTAGTTTAAGTAAGTAAAAAGAAAAGTTCAGGAAAATTTTTCTCTTATAATCCTTCATTTGGCACTTATTAATTGAAAATTTAAATAATTTAAAAGTATATGATTTATAATATATAGAAAATAGACACTAGAAAAATAGAAAATGACTATAGATACTTTATCTTGTTTTACTATTCTTTGTTTAGTATGTGTACATGTATGTTCTAATGTATCATAATTTTTCATTTTCATTTGAGTCTAATTTCCCTAATTTTGTTCAGTTTTAAAATATAACAACTTTAACTTCATATTTTGTAAAGGGCTAAAAGTATGATTTAAAACTACTTGATATTATATTTTAATTGATACTATATTTTAATTCTAAATGAAAGATAATGTAAATAAGCATGATTCTGATTTGAATAAAGATTTTAAAGTAGTAATAATGTATTTCATTTTTAACATGATTTAGAGTGGTCAGTATCAATGAGTGAAGACAGTTCTGTTTTATGAAGATAGATGACTATATAACTTTGAAATTTTTATTTTAAGAAAATGAGGGTAAGTCCAGATTTTTTATGAGTTATTTTACTCAGAGTTTTATAAGAATTCAGCATAGTTTTCCTAATTAAGATATGTTTTTGGAAAATATAATTGTAAGAATTTACCTTCTTGTATAATTACTGTAAGGATGATTTGTGTCTTTTTAAGGTCTTAAACTGTATCAAGATATTTTTCTAAAAGTCTTTAAAATATTTTTGTATTCAAATAACAGATATAACCAGTATCAGTTTAGTCAGTCGTGTCCGACTCTTTGCGACCCCCTGAACGCCAGGCCTCCCTGTCCACCACCAACTCCCGGAGTTTACCCAAACTCATGTCCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCTCTCAATCTTTCCCAGCCATTAGGGTCTTTTCAAATGAGTCAGCTTTTCACATCAGGTGGCCAAAGTATTGGAGTTGCAGCTTCAACATTGGTCTTTCCAATGAATATTCAGGACTGATCTCCTTTAGGATGGACTGGTTTAATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTTTTCTCCAACACCACAGTTCAAAAGCATCAATTCCTCGG EMBV3_22273 GAAGCTGCCTGCATTCTTTGGGTCCTGGATTCTTTCCAGCAATGTTGCCACTGAGACCTC Gene BVV0102_185750 + 0 NULL GK000030.2:139676327-139714190 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00245968 TCONS_00245967 1 XLOC_150865 Coding TCONS_00245968 XLOC_150865 NonCoding Coding - X:139688852-139702065 - TSS184533 312 0.445512820512821 2 0.976536481986073 0.000734067602561259 0.000703589463481287 0.000785996817151179 0.000378809465484484 0.000123956252782291 0.000407004391400328 0.000570086486785659 0.000595230319449613 0.000263844157428696 0 0 3.82018545089116e-05 1.37946458655037e-05 0 6.28998212901681e-05 0 0 0 0.00054759951181274 0.000316157219487663 1.8658469833527e-05 0 0 0 0.000562106206293136 2.65556532142985e-64 0.000425684660344906 0 0 0 0 noncoding 0 0 0 0 -0.330977020431303 0.15323565671006 0.0194555836353728 0.684394987568064 TTCCAGGTTTTCTGACATCAGAGGTGAGGCTTTAAGAATGAGCGCCATATTTTGGACTGAACTCTAAGGAGGCACTGAGAACAAGTGTACCAGAAGACCTTTTTAGATGACTGCCCTCATTTATGTCAATCAACTTGCCAAAACAAAGAGGAGGATATCTGGATTCTTGAGCTTTTAGAAGCTGCCTGCATTCTTTGGGTCCTGGATTCTTTCCAGCAATGTTGCCACTGAGACCTCTGCTGCCATCACCACATCTCCTTCTCTGACTATGCCCCTTCTACTTCTTTACTTCCCATATAAGGACTCTTGGAT TCONS_00245969 s 5' 0 TCONS_00245969 s 5' 0 EMBV3_40352 GGAGAACGAGGACCCATTCTACTATGACTACGAGACCGTCCGCAATGGGGGCCTGATCTT Gene GeneID:281773|FXYD2:NM_174320:26_cdna Constitutive 0 NULL GeneID:281773 15 GENE FXYD2 MGC179461 FXYD domain containing ion transport regulator 2 EMBV3_10500 ATTGGACCCCGAGGTTCAGGAAAGACCATGGACTGCTGCAGATCAATGATAAAATTGCCC Variant GeneID:529245|ORC4L:NM_001046301:106_cdna 388^463 5 EMBV3_40584 GeneID:529245 2 GENE ORC4L MGC133948 origin recognition complex, subunit 4-like (yeast) EMBV3_22648 AACATGCGGGACGCACCACTAAGGCCGTTATTCAAGCCCTGGATGAAAAGATCGCCAAGT Gene GeneID:507369|GNL2:NM_001045967:95_cdna Constitutive 0 NULL GeneID:507369 3 GENE GNL2 MGC134432 guanine nucleotide binding protein-like 2 (nucleolar) EMBV3_35346 GTGAGGTCTGTTAGGGGTGCATCCTGCAGCTTAATTGGCTTAAAATGTCCTCTCCTTTGG Gene BVV0101_033380 + 0 NULL GK000019.2:78825-90218 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00168737 TCONS_00168746 TCONS_00098204 TCONS_00168741 TCONS_00168740 TCONS_00168751 TCONS_00168755 TCONS_00202657 TCONS_00119310 TCONS_00168747 TCONS_00168739 TCONS_00119313 TCONS_00168748 TCONS_00164321 TCONS_00204640 TCONS_00202656 TCONS_00168753 TCONS_00119315 TCONS_00168754 TCONS_00119314 TCONS_00168745 TCONS_00168742 TCONS_00119312 TCONS_00168738 TCONS_00119311 6 XLOC_103174 XLOC_058450 XLOC_124016 XLOC_072869 XLOC_100202 XLOC_124496 Coding TCONS_00204640 XLOC_124496 Coding Coding - 6:20413972-20418826 - TSS153051 3148 2 TCONS_00204640_9 130 0.306543837357052 2 0.351741191015866 0.148505195416181 0.126002462205398 0.136800279474487 0.0993590771190472 0.130133882119036 0.0480536066423031 0.0760458575472801 0.114515044727616 0.17750770940019 0.0218214825413354 0.00281132127368957 0.00379017950592231 0.0240202229194392 0.0529367491886849 0.0398083188833594 0.0009935021033482 0.00224579179507347 0.0010368162934631 0.0998810081179903 0.0877740241495524 0.0433217597661745 0.000903736109012594 0.000777381793498529 0.00127469500945967 0.123708491525303 0.0914770614046789 0.0894469428108921 0.00130516825875574 0.00102207187226357 0.00196589778498949 XM_005203639.1 TPM3 PREDICTED: Bos taurus tropomyosin 3 (TPM3), transcript variant X14, 0.0 2928 90.58 0.64707750952986 NM_153649.3 TPM3 Homo sapiens tropomyosin 3 (TPM3), transcript variant 2, mRNA. 0.0 2233 83.14 0.64707750952986 TCONS_00204640_3 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 2e-35 131 59.81 0.971698113207547 0 noncoding 1 1 1 1 -0.859087928639218 0.00683989089552069 -1.06405010848439 3.52673399974048e-05 ACTCAAAAAATGGGCCAAAGAACTAAATAGACATTTCTCCAAAGAAGACATACAGATGGCTAACAAACACATGAAAAGATGCTCAACATCACTCATTATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATTTCACGCCAGTCAGAATGGCTGTGATCCAAAAGTCTACAAGCAATAAATGCTAGAGAGGATGTGGAGAAAAGGGAACTCTCTTACACTGTTGGTGGGAATGCAAACTAGTACAGCCACTATGGAGAACAGTGTGGAGATTCCTTAAAAACCTGGAAATAGAAATGCCATACAACCCAGCAATCCCACTGCTGGGCATACACACTGAGGAAACCAGAACTGAAACAGACACGTGTACCCCAGTGTTCATCACAGCACTGTTTATAATAGCCAGGACATGGAAACAACCTAGATGTCCATCAGCAGATGAATGGATAAGAAAGCTGTGGTACATATATACAATGCAATATTACTCAGCCATTAAAAAGAATACATTTGAATCAGTTCTAATGAGGTGGATGAAACTGGAGCCTATTATACAGAGTGAAGTAAGCCAGAAAGAAAAACACCAATACAGTATACTAATGCATAGATATGGAATTTAGAAAGATGGTAATGATAACCCTGTATGGGAGACAGCAAAAGACACACAGATGTATAGAACAGTCTTTTGGACTCTGTGGTGGAGGTGGGGGATGTTTTGGGAGAATGGCATTGAAACATGTATAATATAAGAAACGAATTGCCAGTCCAGGTTCGATTCAGGATACAGGAAGCTTGAGGCTGGTGCACTGGGATGACCCAGAGGGATGGTACCGGGACGGAGGTGGGAGGGGGGTTTCAGGATTGGGAACATGTGCACACCGTGGCGGATTCATGTTGATGTATGGCAAAACCAATACAATATTGTAATTAGCCTCTAATTAAGATAAATAAATTAAAAAAAAATAAAGAGATTGTCATATTGGATTTATTTATTTTGGAGGGACTGGTTATTTCAAAAAGACATTTATCAATTTTCAGTATCAAAACAGTTACACTATTGGTTTTTTTTCTCCCAATTGGTCCCCAAAGAGACCACACCAAAGGAGAGGACATTTTAAGCCAATTAAGCTGCAGGATGCACCCCTAACAGACCTCACTGAAACCTCATCAAAAAAGGGGGATTGGGTAGGGAAAGAAACTTTAAAAGATCAGCACACTGCTAGCCCACAGACTGTAGAGAGCTCTCACAGGCAGAGGGGTGACCAGTTTGCCTCAACCCCAAAGAAGCAAAGTTCCAAAATATAAAAATTTACAAGTTTTGTACATACGCTTTTCAAGATTTCTCCAGCACTAACCAATACAAAGCACAGTGAGATGGCACTTTTAGAGACAGCAGCTTCAGACCCAGAAAAGGGTGATGAGATGAGTTTCATATGGCTAAATCAGTGGCAAAACATAATTTTCTTTCCTTTCTTTCAAGGAGGCAGGAGAGCAAATAAGTGGTCACTTCAATATAAGGGGCACATGATCCATTAGTAGTTGGGAACAGGGTAGAGCTGGGACAAGGATTTGGTCTCAGAGGTTTTACCATCTTAATTGTTTGGTCACTTCTGATGAAAAAAGAAAAAAAAAAAGTTGTCCAAAGATACCGTAAAGCTGAAAACCTGAACAGCACTTTTTTTTGGCTAACTCCTTCTGGAATCATCTTTCTGCTTTGGCAGGTACTTTTTACAGGGCAATGAGGTTTCCCCAAATGGAGCCTTTCTCTGGGCTGCTAGGCTCTCAGTAAGGCAGGCCCAAACCTTTTCCCTTTCTCTCTGGAGAAGGCAATTAAGCTGAAATGTTACCTTCCAAAAGTGAGAAAGGGATTAGACTGCTGCTTCAGTTCTACGGAATTATCTGGAATGTTTTTTTACAAATGGTTGTAACATCAAGAACAAAAAAGGTAATTACAAAATGTGTACATCACAACATGCTTTTAAAGACACTTTGCATTGTGCTCACATTCCCTTAAACGTTGTTCCCAAAGGTGCTCAGCCTCTAGCCCACCTGGAATCTCTGGGGAGAAGCAGAGACTGGCGAAAAGGACACAGGAGTAGGGGGGTGGTCAGCTTCGGGCAGGCTGGCCCCAGTGGAGTCGGAGTCGGGGTGAGAGGGAGGAGCAGCGGCAGGGCGGGGCTGGGGTGCTCTACATTTTATTCAGGTCAAGCAGAGTCTGGTTCAGCATCCTTTGTGTACAGAGGTCCTCCTCTTTGGTGCATTTCAGTTTATCTTCCAAATCATCAATTGTCTTTTCCAGCTTGGCTACTGATCTCTCAGCAAACTCAGCACGAGTCTCTGCCTCCTTGAGTTTTTCGGTAAGAATCTTTATCTCTTCCTCATATTTGTCTTCCTTTTGAGAGTACTTTTCTTCAGCAGCACTCAGACACTTCAGGTGCTGGTCCATCAGTCTGATTTGCTCACCCATCTTTCGGCAACGGGACTGTGCCAGCTCCGCTCGCTCCTCTGTGCGCTCCAAGTCTCCCTCAATAATCACCAACTTGCGAGCCACCTCTTCATACTTCCTGTGTGCCTCTTCTGCAATGTGCTTAGCTTCTTTGAGTTGGATTTCCTGGAGTTCCATTTTTTCTTCATCTTTTAAGGCTTGGTTTTCAATAACCTTCATAACTCTCTCGCTCTCATCAGCAGCTTTCTCAGCTTCCTCCAGCTTTTGCAGCGCAGTGGCCAGGCGCTCTTGAGCTCGGTTCAGCTCCTCTTCAACCAGCTGGATCCTACGGTTTAAGGAGACCACTTCAGCCTCAGCCTGTTCTCGGGCCCATCTTTCTCCATCCACTTTCTGCTGGAGGCGCTTGGCCCTCTCCTCTGCATCATCGGCCTGCTGCTGCAGAACCTGGATCTTGCACTTCATTGCCTCGGTGACAGCGATCGCGGCCATGACAGTGGTCCCGGCCATGGTCCCCACCCAGCTCCTGCTTGCCTTCGGGTTCCTGCCTCCTCCGCTCGGCGCTCGGCGTTGCAGCCGCTTCTCACCCAGCTTGGTTCCTGCAGGGTTGAACTTGTGGCCCACACTAGGCGAAGAGCATGCACAGTCAAAGCTGACAGTAGGAAGCTTGGGATACTTAGGAATGGTGGGTTGCAGTTTATGGGGT TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 35715 TCONS_00204643 TCONS_00204644 TCONS_00204646 TCONS_00204648 TCONS_00204650 TCONS_00204657 TCONS_00204665 TCONS_00204666 TCONS_00204668 TCONS_00204669 TCONS_00204670 TCONS_00204671 TCONS_00204672 TCONS_00204641 TCONS_00204642 TCONS_00204645 TCONS_00204647 TCONS_00204649 TCONS_00204651 TCONS_00204652 TCONS_00204653 TCONS_00204654 TCONS_00204655 TCONS_00204656 TCONS_00204658 TCONS_00204659 TCONS_00204660 TCONS_00204661 TCONS_00204662 TCONS_00204663 TCONS_00204664 TCONS_00204667 s 3' 30976 EMBV3_08634 CCTTGTAGAAATATTGAAAAGTACCTCATTCTGCCTGCTAGCTCTTAAGCTCCCAGGTGG Gene GeneID:512259|HPGD:NM_001034419:29_cdna UTR3_Alt 4 NULL GeneID:512259 8 GENE HPGD MGC127443 PGDH hydroxyprostaglandin dehydrogenase 15-(NAD) EMBV3_19565 ATGTATAGGCAGGTATTTCTCTGGTGGTCCAGTGGCTAAGACTCCGTGCTTCTAAGGCTG Gene BVT0102_093758 + 0 NULL GK000016.2:45197497-45219135 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22949 TGAGGTCGAAAAGTGGTCTGTGTGGGGATATGGACGGGAGGCAGTGAACAGACTGGTAAT Gene GeneID:100301295|LOC100301295:XR_083986:179_cdna Constitutive 0 NULL GeneID:100301295 19 PSEUDO LOC100301295 NULL hypothetical LOC100301295 EMBV3_06189 GAGAAGGCTGTGACCAAGGAGGAGTTTCAGGGTGGCAGACTGGTCTGAAGGCGTGCAGGT Variant GeneID:281898|RPSA:NM_174379:20_cdna 713^759 2 EMBV3_26600 GeneID:281898 22 GENE RPSA LAMR1 ribosomal protein SA EMBV3_36248 GTGCTGTGGGCCCGTTCCTGTTCCGCAAAGGTGAAGTTGGTGATTGGAAAAACCTGTTCA Gene GeneID:530757|SULT6B1:XM_002691343:522_cdna Constitutive 0 NULL GeneID:530757 11 GENE SULT6B1 NULL sulfotransferase family, cytosolic, 6B, member 1 EMBV3_23223 AGGGCTGAAGTGAAACAGCGTCAAGCCAGAAGTGACTTTGCAGCCTTTCTTGTGGGGCCC Variant GeneID:767930|CENPO:NM_001077003:249_cdna 492^869 2 EMBV3_26941 GeneID:767930 11 GENE CENPO MGC128667 centromere protein O EMBV3_40157 GCCGAGCCGCTGGACAAAGTGCTGCAGCAGAACCTGGTGCTCCCCGACACCTTCTTCTCC Variant GeneID:510878|ESRP2:XM_002694825:709_cdna 328^441 1 EMBV3_35875 GeneID:510878 18 GENE ESRP2 RBM35B epithelial splicing regulatory protein 2 EMBV3_00409 AGCTCTACCTGGACGAGAGCAAGCAGTTTTACAAGGAGCTGGGCTTCAAGCGGTACAACA Gene GeneID:617001|C16H1orf93:NM_001040598:219_cdna Constitutive 1 NULL GeneID:617001 16 GENE C16H1orf93 C1orf93 MGC26818 chromosome 1 open reading frame 93 ortholog EMBV3_13491 AGCTGCTGGTTTTTCCAGGCAACTGGCACAGAGACCTAAAATGCTGGAAGGCCCTGGACC Gene GeneID:507075|PAQR4:NM_001098897:84_cdna Constitutive 0 NULL GeneID:507075 25 GENE PAQR4 MGC159845 progestin and adipoQ receptor family member IV EMBV3_28670 CAGTACACAGGGAAGTTCGACATCGTCCTACTGTGGATGTCACTGAGAAGGTCAACACGA Gene BVT0102_363173 + 0 NULL GK000010.2:93309823-93417337 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018460 TCONS_00018473 TCONS_00018471 TCONS_00018456 TCONS_00018468 TCONS_00018472 TCONS_00018457 TCONS_00018465 TCONS_00018466 TCONS_00018455 TCONS_00018463 TCONS_00018467 TCONS_00018469 TCONS_00018470 TCONS_00018459 TCONS_00018462 TCONS_00018458 1 XLOC_009261 Coding TCONS_00018462 XLOC_009261 Coding Coding - 10:93213192-93390392 - TSS12420 1289 1 TCONS_00018462_3 326 10 0.992782126309968 0.00243283792615112 0.00055157748897847 0.0027354016994987 0.0024449541521386 0.00284277578257505 7.81621005019786e-05 0.00115843937735837 0.000293167378679922 0.0017427872000098 1.79872352611821e-25 5.07144798944191e-94 2.30456094211183e-39 0.000183324821463814 0.000206682343920805 0.000466136184572174 0.00174339870816726 2.02492573434103e-20 0.00130686178323202 0.00331628651094289 0.00590033972763514 0.00158054383399746 0.00111800303061725 0.000187272938837089 0.000364384994153427 0.00677911679510201 0.00275843437548771 0.00570292034375069 0.00039121608442377 0.000109107419003852 4.54166871817032e-09 XM_608203.4 CEP128 PREDICTED: Bos taurus centrosomal protein 128kDa (CEP128), mRNA. 0.0 1402 100.00 0.602017067494181 XM_005267364.1 CEP128 PREDICTED: Homo sapiens centrosomal protein 128kDa (CEP128), 0.0 1296 86.86 0.831652443754849 TCONS_00018462_3 sp|Q6ZU80|CE128_HUMAN CE128_HUMAN Centrosomal protein of 128 kDa; 2e-144 439 83.40 0.791411042944785 0 coding 0 1 1 1 -0.0157482474097434 0.905756884852793 -0.00923116040320644 0.882610203525915 GCGAGTCTGGGGAGAGCGGAGTCGGTTGCTTCGCCGCGTCTGGTCAGTTATACCTCCTGGGGTTGCCGGTGGCCGCGGGAGCCGGGTGGGGCCTCGGCAATGACCCGGCGTTAAGGACCTGGGGTCCTCTTCTAGTTCAGGTGGTTTGGGGAAAGTGTAGGGGCAACCAAAGATCCTCCACTTGACTAGGCCTCTTGCCCTGAACCTCATGAAGAAATGTTAAGAGTCAGACATACGTGCCTAAGAAGAGCTCTGAGCTCAGAGGACAGCAGCCCGGAGTTTGGGGGGTATGCTTTGATTTTTATACATCAATGGCAGAATCCTCCAGCGATTCAGACCACTTCCGCTCTCGTGACCGGTTGAGGCGGTGGGCTGCCAGTTCAGTACACAGGGAAGTTCGACATCGTCCTACTGTGGATGTCACTGAGAAGGTCAACACGATAACCAGCACTTTACAGGACACCAGTCGGAACCTGCGACAAGTCGACCAGATGCTTGGACGTTATCGAGAGTATAGTAATGGACAGGCGGGGGCTATAGAACATTTAAAAGAAAGCTTGGAACAATCAATAGGCCAACTGCGGAGTCAACGGTTGTCGAGAAACTCAGGAGGGAGAAGTATTTCTGTTACAAGTCTGAGTACAAGTGACCTCGATGGTGTCACTGTGACAGAGAGCTACCGTTTTCCGCCTACCTCACCTCTCAAGGACTATGGGGATCAACAGGGTGTTAAACGAAATAGGTCCAAAACTGGTGTCCGATTTGTTCCGGAGACTGATGACGTGGGCCAGTTTCATGCTTTTCATCAGTCCCTCCGAGACCTCAGCAGTGAACAAGTTCGCCTTGGAGATGATTTCAACCGGGAACTTGCCAGAAGAAGCCGGTCGGATGCTGCAACAAGAAGGGCTTTGGAAGAATTGACTGAAAAACTTAATGAAGCCCAAAAACAAGATGTGGTTTCAGATCGAGTGGAGCGGCGGCTTCAGGAAATAGAGAAGGAGATGCGAACAGAAAGAGAGCTGGTGGAAAGACGGCAGGATCAACTGGGAGTTATTTCTCAGCAGCTACAGGAGAATTTAACCCGTGAATTGGAGAACAGGGAAAAACAGCAGCTAGAGATGTTGGATGAACTGACGGAGATCCAGAAGCACTTTGAGACATGTGATGCCAAACACAAGCGTGCTGACCTGCAGATCACGAAGCTGACTCAGCACGCCGAGGAGGCCACCAAGCAGGCCGAGCAATACCTTCTGGAGTTCCAGCAGTCTGAGGGCCTGAGACAGGAGGCA TCONS_00015429 TCONS_00015430 r 5' 203930 TCONS_00015429 TCONS_00015430 r 5' 26946 EMBV3_09889 TCCTTTCGCTCAGAAAGATTCCAAGGGCTTGGGTGGGGTTCAAGGTATAAGGGCGAGTTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_41519 CTGCTGAAAATGATCAAGAGATAAAAGAGAAACCACAAACAATCATAAACTATTATCAGC Gene BVV0102_329625 + 1 EMBV3_22810 GK000007.2:43581052-43593792 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_14122 AGGCTATTGTCTGCCATCCTCAGAGTTTCAGAAGTTGAGTCTCGGGCAATAAGGGCTGAC Gene BVV0102_047315 + 0 NULL GK000012.2:35962689-36055181 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00035214 TCONS_00035217 TCONS_00035220 TCONS_00035215 TCONS_00035216 TCONS_00035212 TCONS_00035219 TCONS_00035211 TCONS_00035218 TCONS_00035213 1 XLOC_020863 Coding TCONS_00035214 XLOC_020863 Coding Coding XPO4 12:35958362-36048066 = TSS25861 4673 1 TCONS_00035214_4 1152 23 0.948162268820441 0.0012324862250146 0.00196383598904663 0.00138560158882162 0.000559011748085694 0.000667379506253565 0.000561413348775787 0.000617083619079499 0.000962234001961016 0.000734435546416595 0.000949058819438838 0.00052059638912543 0.00033629693984975 0.00034265883803788 1.36484897443404e-05 2.86534513541457e-13 0.00368909300391955 0.00105754356315995 0.000695868656022675 0.00303261812730141 0.0030835211120126 0.00131119478207496 0.000456696927185451 0.000991990491370022 0.00114416190592481 0.00200013275161012 0.00289620507751607 0.00218234430669597 0.000220437009838288 0.000391658580421714 0.000590379501994316 XM_005213764.1 XPO4 PREDICTED: Bos taurus exportin 4 (XPO4), transcript variant X1, 0.0 8428 100.00 0.999786004707896 NM_022459.4 XPO4 Homo sapiens exportin 4 (XPO4), mRNA. 0.0 4181 86.18 0.758399315215065 TCONS_00035214_4 sp|Q9ESJ0|XPO4_MOUSE XPO4_MOUSE Exportin-4; 0.0 2230 95.66 0.999131944444444 0 coding 0 1 1 1 0.0501674056000522 0.666035723153229 0.00178620933374989 0.98074051825174 ATGATGGCGGCGGCGCTGGGGCCCCCAGAAGTGATCGCTCAGCTGGAGAACGCGGCCAAAGTTCTGATGGCACCACCTTCCATGGTTAACACTGAGCAGCGCCAGCATGCTGAGCATATATTCTTATCATTTAGGAAGTCAAAATCACCGTTTGCAGTTTGCAAGCATATTTTGGAAACGAGTAAAGTGGACTATGTCCTCTTCCAAGCTGCCACAGCCATCATGGAGGCTGTGGTCCGAGAGTGGATTCTGCTGGAGAAGGCCAGTATTGAGTCCCTGCGCACCTTCCTCCTGACCTACGTCCTGCAGAGGCCTCACCTCCAAAAGTATGTTCGGGAACAGATTCTATTAGCAGTAGCAGTAATTGTAAAACGAGGATCATTAGATAAATCAATTGACTGCAAAAGCATTTTTCATGAAGTCAGCCAGTTGATAAGTAGTGGCAACCCCACTGTGCAAACTTTGGCCTGTTCAATTCTCACTGCACTGTTGAGTGAATTCTCAAGTTCAAGTAAAACGAGCAATATTGGACTTAGTATGGAGTTCCATGGCAACTGCAAAAGAGTTTTCCAGGAGGAAGACCTCCGCCAGATCTTCCTGCTGACGGTGGAGGTGCTTCGGAATTTCAGCCTGCAGGAGCACCTTAGCGCCCAGATGTCGTCCGTGTTCCAGCGCTACCTCGCCCTGGCCAACCACGTCCTCAGCTGGAACTTCCTGCCTCCAAACCTGGGCAGACATTATATAGCCATGTTTGAGTCCTCACAGAACGTGCTCCTGAAGCCAACGGAGTCCTGGCGGGAGGCCCTCCTGGACAGCAGGGTCATGGAGCTGTTCTTTACCGTACATCGAAAGATCAGAGAGGATTCTGACATGGCCCAGGACTCGCTGCAGTGCCTTGCACAGTTGGCGTCCCTGCACGGGCCTGTCTTCCCTGATGAGGGCGCTCAGGTGGACTACCTCGCCCACTTCATCGAGGGCCTGTTGGGCACCATCAATGGGATTGAGATAGAAGACTCTGAGGCTGTGGGCATCTCCAGCATCATCAGCAACCTGATCACCGTGTTCCCTCGCAACGTGCTGACTGCCATCCCCCGAGAGCTGTTCTCGTCCTTCGTCAACTGCCTCACGCACCTCACCTGCTCTTTCGGGCGCAGCGCTGCACTGGAAGAAGTGCTGGACAAAGACGACATGGTATACATGGAGGCGTACGACAGGCTGCTGGAATCCTGGCTGACGCTAGTACAAGATGACAAGCACTTCCATAAAGGCTTTTTCACCCAGCACGCAGTCCAGGTGTTCAATTCCTACATTCAGTGCCATCTCGCTGCGCCCGATGGCACAAGGAATCTGACTGCCAACGGAGTGGCCTCTCGAGAGGAAGAAGAGATCAGTGAACTCCAGGAGGACGACCGAGACCAGTTTTCTGATCAGCTAGCCAGTGTAGGAATGCTAGGACGCATTGCTGCAGAGCACTGTATCCCTCTCCTGACAAGTCTGTTAGAGGAGAGAGTCACACGGCTCCACGGGCAGCTCCAGCGGCAGCAGCAGCAGCAGCTCCTCGCCTCGCCCACCTCAGGCTCCGCCGACAGCAAGACGCTGGACGACCTGTACGAGGACATCCACTGGCTTATTCTAGTTACAGGCTACCTCTTAGCTGATGATACTCAGGGAGAGACTCCGCTAATACCTCCAGAAATAATGGAATATTCCATTAAGCATTCATCTGAAGTTGACATTAATACAACACTTCAAATTTTGGGATCTCCAGGAGAAAAGGCTTCTTCCATCCCAGGGTACAACAGAACAGATTCTGTGATTAGGCTATTGTCTGCCATCCTCAGAGTTTCAGAAGTTGAGTCTCGGGCAATAAGGGCTGACCTCACACACCTGCTAAGCCCTCAGATGGGCAAAGACATTGTCTGGTTTCTAAAGCGCTGGGCAAAGACTTACCTCCTGGTGGATGAGAAGCTGTACGATCAGATAAGCGTGCCATTCAGCACAGCATTTGGAGCAGACACAGAGGGCTCTCAGTGGATTGTTGGCTACCTCTTACAGAAGGTCCTCAGCAACCTCTCAGTGTGCAGCAGCGAGCAGGGCCTCGCGGACGACACGGTTCAGCTGCTTGTCACGCTGGTGGAGAGAAGGGAGAGGGCAAACTTAGTCATTCAGTGTGAAAACTGGTGGAACTTAGCCAAGCAGTTTGCAAGCCGAAGCCCACCTCTGAATTTCTTGTCCAGCCCTGTGCAGAGGACGCTGATGAAGGCGCTTGTCTTGGGAGGGTTTGCACACATGGACACAGAAACCAAGCAGCAGTACTGGACAGAGGTTCTTCAGCCACTTCAGCAGCGGTTCTTGAGAGTGATAAACCAGGAGAACTTCCCACAGACATGCCAGCAGGAGGAGGTGAAGCAGGAGATCACGGCCACGCTGGAGGCCCTGTGCGGCATTGCTGAAGCCACCCAGGTGGACAACGTGGCCATCCTTTTTAACTTTCTTATGGACTTCCTTACCAATTGCATTGGGTTGATGGAAGTTTACAAAAACACGCCAGAGACAGTCAACCTCATTATAGAAGTTTTTGTTGAAGTTGCGCATAAGCAGATATGCTATCTTGGAGAGTCCAAAGCCATGAACTTGTATGAAGCCTGCCTCACTCTGCTGCAAGTGTATTCAAAGAATAACTTGGGGCGGCAGAGAATTGATGTCACGGCCGAGGAGGAGCAGTACCAGGACCTTCTCCTCATCATGGAGCTTCTGACCAACCTTCTGTCCAAAGAGTTCATAGATTTCAGTGACACAGATGAAGTGTTCAGAGGCCAGGAGCCTGGGCCAGCAGCGAGCAGATCTGTGTCGGCAGCCGACGTTGTGTTATATGGAGTGAACCTGATCCTGCCCTTGATGTCACAGGACCTCTTGAAGTTTCCAACTCTGTGTAATCAGTACTACAAATTAATCACATTTATCTGTGAGATTTTTCCTGAGAAAATACCACAGCTTCCTGAAGATCTTTTTAAAAGTCTGATGTACTCGCTGGAACTAGGAATGACATCAATGAGTTCGGAGGTTTGCCAGCTGTGCCTGGAAGCCTTGACTCCATTAGCTGAGCAGTGTGCAAAAGCCCAGGAGACCGACGCGCCCCTCTTCCTGGCCACGAGGCACTTCCTTAAGCTGGTGTTTGATATGCTGGTTTTGCAGAAGCACAGCACGGAGATGACCACCGCGGCCGGCGAGGCCTTCTACACGCTGGTGTGCCTGCACCAGGCAGAGTACTCGGAACTAGTGGAAACACTGCTGTCGAGTCAGCAAGACCCAGTCATTTACCAGAGGCTAGCTGATGCCTTCAACAAGCTGACTGCGAGCAGCACACCCCCTGCGCTGGACCGGAAGCAGAAGATGGCCTTCCTGAAGAGTTTAGAAGAGTTTATGGCAAATGTTGGTGGTCTCCTTTGTGTAAAATAAACAACAAAGCTTTATGCTGTACCAGACCCTTCCTGCGAAGTGCACTGAATTGCTGAGAGTTGACTAGAGTCTTGTCCTGTTCATCAATCCCACGGCCGCTCGGACTCTGGAGAGCCTGCCAGCTCGGGGTGTGATGCGGGGAGAGTCATCTCGAATCGGCTTCTGCTGTAGGCGTCAGCCGCCTTGTGGCGTAGGGCTTGTACTTTGTCAAATGAAACTCAGTATGTGTGCAAACACACGTGGGCACCAGGAAGTACATCCCCAGTGCCTTTTCCCTCTTTGACAGAGCATCAGGCGGCCACCAGCGTCCAGTCTTGTCATTACAGACAACTGGATGTCTGCTCGGCCACTGGCCGTTGACGGCACATCACCGAGGAGTTGGTTGAAAGGGTGGACCCCGGGGCCCAACCATGGACCCTTAGAGTTTGTTTGTTGGACCCTGGATTCTTCATTTTAACAAGCTCCTCTCCTCTGCCATCCCGCAGCTTTCAGTCAGTGCGGGAGACACTGAACGCTTCCAGCGATGTGCGCCCCCCCATCCCCGGCCCAGTCTGGTCCTTCTTTGGGAGGGGCAAGTGCTCCAACCAGAGAAGGGTACCAGGGTGGGTGTCTGTGGCCTCCCATTGCCCCCTGTCTGCTGGGTCATGGCAGCCTGACCACTGCAGGTCCTGTGAACCTGCTCTGATGCCTGAACCAGAGGAGGAAAATGTGTGTCTATTTTTGTTCCATAAAAATAACTTTAGGAACTGTAGCCATTTCATTGCCTTAATTTTGAGAAGAAATTACAAAAAGAAGCAGATTGTTTTAGTAAGAAATCAAGTCTTGACGCTTCAGAGTTGGTTTAGGGTGTTGGCTGCTAAACACCAGGGCCCGTTTGATTGTGTTTTCGTGGTTTTGTGGGTGAAATGAAAGGCTCATTCATACCTAGTCTAACTTTCTGAGTACGTTTCTGTTTCTGTCCACCCTCGTGGTCCGTGGCTGTTACTCTGCTCTGAATGGCTTGCTTAAGCAATAACTCTTTTTAAGAATGTGAATTGCTGGTTCATACACGTAAAACGTGGGGATGTCAGAGCAGTAATTACCCTCAGTTCACAGGAGCCATGTGAACTTAAGAGATTAAAAAGTTCACCTTAGATCTCCTTTGATTTTTCTAATCAGGATTTGTGTACTGCTGTCATACTCTCCTGAGCTCTGTGTGCCAGCTCAGATCACAG EMBV3_34714 AAGTGAAGACGCTGACCAGAAAGGAGATTGAGATTGACACTGAACCCACAGACAAGGTGG Gene GeneID:100296298|LOC100296298:XM_002690219:3_cdna Constitutive 0 NULL GeneID:100296298 9 GENE LOC100296298 NULL similar to neural precursor cell expressed, developmentally down-regulated 8 EMBV3_35609 ACATCCTGGAGCCAAGCCCTTCAGTCCCAGGAAAGTGTTGGATCAAGAGCCGTCATTTCT Variant GeneID:508492|GSDMC:NM_001046004:11_cdna 350^533 1 EMBV3_04528 GeneID:508492 14 GENE GSDMC MGC129112 MLZE gasdermin C EMBV3_30319 TTCTCTCTTTTTTTTGGGGAGAAACCTCCGAATTTCTATGAGACCCCCACAGGGAGGGGG Gene GeneID:537698|GRIK5:NM_001046424:337_cdna Constitutive 0 NULL GeneID:537698 18 GENE GRIK5 MGC128958 glutamate receptor, ionotropic, kainate 5 EMBV3_32213 GTCCCTGGAGCTGTCGGACGACGACACAGAAAGTAAGACCAGTGACATCAACGAGACACA Gene GeneID:317655|MYH10:NM_174834:442_cdna Constitutive 0 NULL GeneID:317655 19 GENE MYH10 NULL myosin, heavy chain 10, non-muscle EMBV3_30508 TCTTTGGAAGATTTCTGTACATGGGTTGCACTTGTGACACCGTCCTTGGTGGTGGGCTGG Gene BVT0101_006164 - 1 EMBV3_18772 GK000017.2:45499181-45501311 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077109 TCONS_00077110 TCONS_00077108 TCONS_00077106 TCONS_00077107 1 XLOC_046987 Coding TCONS_00077107 XLOC_046987 Coding Coding PGAM5 17:45490379-45511335 j TSS57727 5743 2 TCONS_00077107_8 248 0.199199024899878 10 0.726413743736578 0.000169625584177313 5.43457837767203e-05 0.00011840383070427 0.000179422328892911 0.000127785873142565 6.03270062255295e-05 0.000154019407521008 8.34408909345715e-05 9.03251690366279e-05 7.68503389246488e-99 5.65726397840748e-27 2.69503706349093e-06 1.31884584812565e-05 6.72714868822952e-114 9.83199527137458e-68 0.000140229705135129 6.62165000701878e-21 2.98526570484762e-05 8.92228901640691e-05 0.000221028183866619 0.000104180975699027 1.20246024263218e-05 2.55098326990287e-259 1.52521345140834e-13 0.000120561091795245 5.581085414351e-05 0.000154094963307003 2.93147380750018e-06 1.04801385111107e-38 0 XM_005217654.1 PGAM5 PREDICTED: Bos taurus phosphoglycerate mutase family member 5 (PGAM5), transcript variant X2, mRNA. 0.0 2845 100.00 0.274421034302629 NM_001170543.1 PGAM5 Homo sapiens phosphoglycerate mutase family member 5 (PGAM5), 0.0 930 85.77 0.139300017412502 TCONS_00077107_8 sp|Q96HS1|PGAM5_HUMAN PGAM5_HUMAN Serine/threonine-protein phosphatase PGAM5, mitochondrial; 8e-168 470 93.33 0.963709677419355 1 coding 1 1 1 1 -1.65483373215857 0.0189672310757517 0.00370523483135414 0.961612196452558 GTGGACCGGGGAAGACGATGGCGCCGGCGGCGTCGAAGCTGCGGGCGGAGGCTGGACTAGGGCCGCTCCCGCGGCGGGCACTCTCCCAGTACCTGCGCCTTTTGCGGCTCTACCCAGTACTCACCAAAGCGGCCACCAGTGGCATTTTGTCAGCACTTGGGAACTTCCTGGCACAGTTGATTGAGAAGAAGCAGAAAAAAGAAAACTGTTCTCAAAAGCTAGATGTCAGCGGGCCTCTCAGATATGCCATCTATGGGTTTTTTTTTACAGGGCCACTGGGTCACTTCTTCTACCTCTTGATGGAGCGCTGGATCCCTTCCGAGGTCCCCTTGGCAGGCATCAAGAGGCTCCTCCTGGACCGCCTTCTCTTCGCACCCGCCTTCCTGTCTTTGTTCTTCCTTGTCATGAACTTCCTGGAGGGGCAGGACACCGCCGCTTTCGCTGCCAAGATGAAGAGCGGGTTCTGGCCAGCGCTGCGGATGAACTGGCGAGTGTGGACACCTGTGCAGTTTATTAACATCAACTATATCCCTGTGCAGTTCCGGGTGCTTTTTGCAAACTTGGTGGCTCTGTTCTGGTACGCCTACCTGGCCTCTCTGGGGAAGTGAAGATGACCTGGAGAGGGTGTCAGACATACTGATGACTGGGGTGGGGTGAGAGAACAGAAATAAGCCAGCCAGGCTCTAGATCATGAGATTCAAGATGACTCGAACATGATGGATGGAGAAAAAGAAATCTCTTAATGTCAGAATCGTGTTTTAAAAAGGCAATCGCTGTCCTCAGGTGGTGCTGCCCTAGAAACTTAAATATAGCAGAGATGATTTCACCTGTCACCTTGGATTGAATTATGATCACAATAAACTATAATGTAGCATTTTCAGTGGTGATTTTAATTTCTCAGAATAATTGCTGTTGTTTTGATAGAAATGAGTGACCAGAGGACTGCTCTTGGAATTTTTTAAATGTTTAAAAATTTGTAGTAAAATATATCACAATACAACTGTTTAGCTACTTGGCCCCATAGGGCAAGGGCCCCTTAGACCAAGACTTTCCCTGACCTTCTGAGAGGCCCTATATACCACCCTTTCCACTGGGTCTACTCTCCTGTTGCTCATTTACATTAGCCCTCCTTCCCTAGTTTTTCATTCTTAACATTCCTTCCTGATAGTCTCCCATCCTTATTTCATGGATACAATATCCCTTGGGATCTCAACTGTATATATTTTAAAATTTTCTTCCGTCTTGTGTGCTGTTTTCTGTTTTCACAGGGTTCTTTTTTTTTTTTTTCTATTTGATCTTTGTTGTTGTTCAGTCACTAACTCATGTCCAACTCTGCGACCCCATGAACTGCAACATGCCAGGCTCCCCCGTCCTTACTATCTCCCACAGTTTGCTCAAATTTATGTCCATCGAGTTGGTAATGCCATCCAACCATCTCATCCTCTGTCCCCTCTTCTCCTTTTGCTTTCAGTCTTTTCCAGCATCAGGGTCTTTTTCAATGAGTTGGCTCTATCCAGTCATTCCAATGAATATTCAGGGTTGATTTGATCTTTGTTTTACCCTATCAGGATTACCTGAAATGTCTGTAAATACTTGGATGTGTATCATTGTTAAAAGAGTCAAAGCCACTCAGACATTCTTTGGAAGATTTCTGTACATGGGTTGCACTTGTGACACCGTCCTTGGTGGTGGGCTGGCCAAGCAGGGACCCAGTTTTGTTGGGGCTAGTGCCTGTAACTTATCTGGCTCTTCCAGATTCACAGGACTGGATGAGCTTGCTTCTTGGCTTCCCTCAGTGAAGGCAATTGATATTCCATCTTCTCAGATCAATAACAATCTGATTTCCAGCTTTCAAAATTTTGTCAGCTGATCTCTTTGCTTGGTTTCTTCTGTGAATTCAAGCACATCTTTTTGAATTTGTCCTTTTTAAAAAAAAATTTTTTTGCTATCATTTTTCATAAGTGACCTTCTGGAAGGAGACATAAATATATGGGTTTAAGACACCATGTTTATGCAGAGGTCTGGGTATTTCTGTGGAATACGTTCATTCTTCAAAATCCAGAGTGACTTTATAATGTAAATCGGATATCACTTCCCCATTTAAGTCTGCCCAGATGATCCAGCAGTTCCATTTAGTTGTATACCCAGGAGAACAGAAAGCAGGGACTTGAAGAGACGTTTGTATGCCATGTTCACAGCAGCATTATTCTCAATAGCTAAAATGGGGAAACAACCCAAATGTCCATTGATGAATGACGAGATGTCCGTCAATACAGTGGAATATTACTCACCCTTAAAAACGAAGGACATTCTGACAGATGACTCAGATGAACCCTGAGGACATTGTTAAGTGACATAATCCAGCTCCAAAGGACAAATACTGTTTGACTCTATTTCTTTCGGATTCCTGGAGCAGTCGAACTGAGACAGGAAGCAGGATGGTGGATGCCAAGGGCTGAGGAATTTAGTGTTTTAACAGGCACAGAATTTTAGTTAGGGACGATAAGAAAGTTCTGTAGATGGATGCTGGTGATACTCGCACAACAAAGAGAACGTGCTTAATATCCCTGAGCTGTACACCTAAAAGCGGTTACGTTGGTAAATTCTGCAGTATGTGTATTTTGCCACCGTAAAAACAAAGCAACCAGCAAACCCTGCTGGAGTTTCCTAATTCATCTGAACCAGACCCTCAAGTTATCCAAGGGTTCCACCTGGGCTTTCTCCGCAGGTGCAGGTGTAAGTACTTGGGTCGGGTCCCTGTCCAGACGGCTCAACCGGGGCGCCGTCCGAGCCCTCGCTCAACGGCAGAAACGAGTCGCACAGCAGGCCTCCGGCAGCAGGTCGACCAAAGGTCTCAGAACCACTGCCTACCACCCGGCTCCGCCTTTATCCCTGGAAGTCACCGCGGCGAATAAGGCGATCGCGGCGGCTCCCGCGCAGCCAGCCGGCCGGAAGCGTACGTCCGACGAAGCGTGTCCCTCGCCGCACGCCGTCCACACCCGAGCGCGCCTGCGCGGAGCCCGTGTGGGGTCGACGCGGGACTTGACCGGCATGGCGTTCCGGCAGGCGCTACAGCTGGCGGCCTGCGGCCTGGCCGGAGGCTCGGCCGCTGTGCTCTTCTCGGCAGTGGCGGTGGGGAAGCCCCGCGCGGGCGGGGACGCGGAGCCGCGCGTGGTCGAGCCCCCGGCGTGGGCGGGGACCTCACGCCCCGGGCCCGGCGTCTGGGACCCCAACTGGGACAGGAGAGAACCACTGTCCCTGGTCAACCTGCGGAAGAGGAACCTAGAGACTGGAGAAGAGGAGCTGACGTCCAGGCTGGACCACTGCAAGGCCAAGGCCACACGGCACATCTTCCTCATCAGGCACTCGCAGTACCACGTGGATGCCTCCCTGGAGAAGGACCGCACGCTGACGCCCCTGGGTCGTGAGCAGGCTGAACTAACTGGTCTCCGACTTGCAAGCTTGGGGTTGAAGTTTAATAAAATCGTCCATTCCTCCATGACCCGTGCGGTAGAAACCACTGACATCATCAGCAAACACCTGCCGGGAGTCTGCAAGGTCAGCACAGACCTGCTGAGGGAAGGCGCCCCCATCGAGCCCGACCCCCCCGTGTCTCACTGGAAGCCGGAGGCTGTGCAGTATTATGAAGATGGAGCACGGATCGAGGCCGCCTTCCGGAACTATATCCACCGGGCGGACGCCAAGCAGCAGGAGGACAGCTATGAGATCTTCATCTGCCACGCCAATGTCATTCGCTACATCGTGTGCCGGCTGCGCAGCGGGGACGGCCACCTCTAGGCAGCAGGAAGGCAAAAGGATCTACAGCACAGAGTTCTTAACTCACGGTCCAGGAAGGAAAAGGGAAGCACTTGGATCAGACCAGCTTCATCTCTTTCGCAGGGTGTCTGCCTCCCTCTCATCCAGGACGAGCCTGAGGGGTCCAAGCAGGCCTGTTTGAGGGACTGGATGAGGCCCCCCAGATGCTGTGACTGTGGGGACCAGGCAGACACGGCAGCAGGCTGTCTGCCAGCAGAGCCCGTCAGGCAGGAAGAAGAGGAGGAGGGCGCAGTGCTTTTTCCGTTTGTAACTTATTCTGCTTCGTATATTCGTTTCCTAAAACTCTTGTCACTTACATAAAGATTTTCCTCATCTGGTTCTTGCTTTGAAAAGCACTTTCTCACTCCAAAGTCACACCTCCCTGAAGCTGTGGGATCTGAACTTTTGTGTCGTGACGCCTTTCTGGATACACAGGAGGAGCACCTTGGCCGGTGAGGGAGGTGACTCAAGCTGCTGGCCTCGCCAGAGAGGCAGTGATGAATGCCTCAGGAGTGGCCCATTTCAGTAAAACGTCCAACTGACAGTTCAGTCCTTGTTTGCCTCTGGCTGTTAATCTTTCATGCTTATGGATTAAAATATTTAGTATGTCCTCCCAAATTTCTGTTATTTTAGGAGAAAGTACAGTTTTTATTAAGTGGTTATGAACATTTTCTGTAATCAGTGCAACTAATTGGAGTATTTGATGTTTCTGTCAATTTTGGAAATAACTACAAAATAAATTTTATTTTACTGGTTTTTCAAAGTACTAATTGTGAATGTTTCAAAACAAGAGGCCTGTGCATGACAAACAACAGCCCCAACTAGCAAAGAAAGTCTCAGCAGAAAGGCCTTTTCCCCAGTATCTTGTGTACCCCGGGCTGAAGTTTTGCAGGGTATCTGCCCAAGAGGGGCCTCGGTGAGAGGCCCTGACCCAGGACAGGGAGCTTAAGTGGTTTTCTAAAAGTAACAACCATGCACCAATCTGTAGAAATAGTTTTGACAAGTTAGCCAGGGGCTGTGCCAACGTCCAAAACCAGAAAAGTGCAAGGCAGCACCAGGTGTCTGGCCTCGGGTGCTGTGAGATCCCGTAGTCGAGCCCTGGGCACCCAGACCGTCAGCACCTGCAGGTCCTCCCTGTTTCCTTGGGTTTGTGTGGTCATATTGCTGTCCTGTCTGCAGACCTGTCTTTTCAGTGGCGTGTCCACCCTTTGCACTTGACTGCTGAGCAGGGCCAACGTTTCAGAAACAGGAAGTGAGCCCAGGAGCGGGAGAAAGGTGTCTTGATGGGGTCAGTTACAAGGGCCCAGGAAACCACCCTGAGGTGGGACATATGACCGAGAACTTACAAAATGTCAGGAAAGACATCCTAAATGTGACCAACATAAAAACCCACCCCGAGAGCCTGTGTGTCAGGAGGGATCCCAAACTGACAGCAGTGAGAATGAAAGTGGTTCTTACTGGCTGCATTGCTGTTTGTTCCAAAGTATCTCAAGACAGTTGAGGAAGGAACCCGAGGGCAGGTGTGACCCAGAGCTGCCTGCGGGTCTCCACACGGAATGAGAAACACGTGCCTCCGACTGCCTGAGCACACCTGGCTTGGGGATGGGATGGCGATGTGCCCAGTGACTGGCAACTGTACCCTACAAGACAGTCACCCTACAACCATCCTCTCTGAGCTGTGAACGCTTCTGGAAACATCCAAAAACTACCCCAGAAGATCTGGCTGCACGTGTGGAGCCTGCTCTCCCCCAGGAGAGGGGACCCTCTGGAGCCCCCTGCACGGTAGCCCACGGCACAGCCACCACCCACCATGATGAGGTTCCCATCACCTCTTTCCAACCAAAGACATTACACACTGATTGTCAACATCACAGAAAAAGGCTTCCTGTTTCATGGGACGCTTAGGAAATATTTGCTAGTTTAACTG EMBV3_41796 CAGCTTCCAGAACGTCTGCTCAGAAACTGGTGTTAAAGTGCTTCAATGCGACCTCCCAAA Gene BVT0101_029092 + 1 EMBV3_34435 GK000020.2:62697439-62725183 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117978 1 XLOC_072144 NonCoding TCONS_00117978 XLOC_072144 NonCoding NonCoding - 20:62719238-62722444 - TSS88446 3206 2 TCONS_00117978_4 71 1 0 0 0 0 0 7.69990265277624e-07 0 0 0 0 0.000372178456507194 0.00011138901491367 2.00755799861893e-05 0 0 1.68334769923169e-05 0.000115334585960763 0 1.5652476814985e-05 0 1.12155759665031e-06 3.31411749996532e-06 0.000185169645293134 1.43076152235155e-05 2.09165670208967e-05 2.16109636999537e-06 0 0 6.89079825332697e-05 1.05995676752246e-05 0.000472578645878158 NM_001164440.1 ANKRD33B Homo sapiens ankyrin repeat domain 33B (ANKRD33B), mRNA. 1e-112 412 73.93 0.210230817217717 0 noncoding 0 0 0 0 -0.0814010781844418 0.672824000840228 0.0487847572240076 0.406295205550729 GTTCAAAGGTCAAAGGGAAAGACACATTCTTTCTGCTGAACAATATATCCCATCTAACTTAAAGATGATTAACCTTTTGGATATCAAGAATTGAAATGGCTGAGGTCACCTTTATTTGTAGGTCCCCAAATAGCCCTGAGGTCTAAATAGGAAAATATCTTTTATAAACCGTAACAAAACTCTCACCTCAAAATAAAACGCTATGAAATTTACACAATTATATCCTTATTCAACATTTTTACAATGTCCAGAAACCCACCGGATTTTTAGAAATGACAATGAAAATAGTTTTACATTCAGAAAACAAAGCTTATACCAACGTGACATAACCTGAAGCCTGGCCCCTGTGCAGAGTGCACACAATTCTTCATCACCCTTGTTAAAGACGTATCTTCAGACACCCAGCGTGTGCCAGGGAGAACGAGGGTTTGAATGAAAAGGATTCCAATGAGATTTGCCTTGCCTGTTTGTTTCAATGGGGTCTATTACTCAAATTCCCTGGGATGTCCCAAAGGTTCACAGGGTTGCTGGTAACACTGCCAGGTTTCTAGCATCCTTTTCTGGTTTTCATCCAGTTTTGAAAGAGCCATGAGTTTCCAAACCAGCTTCCAGAACGTCTGCTCAGAAACTGGTGTTAAAGTGCTTCAATGCGACCTCCCAAAAATCTCATAAAGCATCAGCACAGGCCACTGCTGGGCCTGCCTGGGTTCGTTTAGTTTCTCATCCACATTTTCTTCAAAAACAGGAGAAAAATGTCCCGTTATCATGAAGTGATTCTCTCAAAAACCAAACTGCATGAGCAGTGATCGATTAGGGCATCTCAACACTTGGACAGACTCGGGGAATTCTCAGCAGCCTCCTGGTTCTGCTTCTTAAGTCAGCCTGGTACCGAACCATCTGTGACCCCAGGCCGAATACCTGGTGGAGCTCCCCCCAAGAATCCCCTCTGGATTCTGCCACTCCACGCCAGGGATGCAGCCAACAGCAGAGAGGACCCAGGCCCGGCTACACAACCTCATCCAGGAGCCGCCCAGGCCAACACCACCTTTTGACAAGGACACCTGGGTGATGACACGCTGGTTGTGTTCTGTGCCACACTGGACACACTTGAGGGGTCCCGGTGGGGGTCTTGGGCTGTCTCATCCTCAAATACACCAGGTCATAGCTGATATTCCCTGGCAGCTATAGTGGCAGTCCCCTTCGTGAGCACGAAACCCAAACTCCTTCCTGTGGGTGTGTGTGCACCCGCTCACATCACGTCACACGCCTCCCCTTGCAGCTGAGAGCCGTCAGACCACTGCAGGGCTTGCCTTTCACAAGAGCGTTATTTCAGGCTGGGTCAGGGGAAGGAGAGATTGAACAGCAGCCATCTCATTCAACTGAGTTCCTCAAAAATGAGCTAAATCAAACCAGGTTGTGATGGTTTGGGGAAGTGGGGCGATTTTGTTTGCTTTTCTATTTCTTAAAAAAAAAAACTTCCAGTGAACTTTTTTTTAGCTGCTGGTTTTAAATGTTAATGAAGACACACGAATTCATCCCTGACACAAGAGTTACCCAGAGGTTTGAAACAAATTCTCCATGCTGGAACTGGCAGGGCAACCAGGGTTTCAGGAAGAGCTGTTTTGTTGCAAGTTCTTTATAGCAACAGCCTCCCCCCCCACCCCGCCCCCACCGTGGTCACGATTATGTATCAATTTATGTATCAATGCCAGTTGTCCAGGTGAATGGGACTTTGTTGTTTAATCGCTCCTGATGGATCCTCCCGCTTTCCTTCCCAAGAAGACATGGTCCCCCAGGCCCCGCTGAAAGGGGCTCAGTGTGAGCCTACTGCCCAGAACAGCAAGGACCAGACACACAGGCCAGAGTCCTGAGGGATCACCGTGAGCTGGGCACCCACAGCCAAGGGCAGAATCCAAACAGCTCCCCATGGGGCTCGTGAGCGTGGGGGGCGTGTTAGAATGTCCGCAAATACTTAAAAAGTGCCAGCACTTCATTTGGTAAAAACAGTTGCAACAAGAAGCTTACAATAGTTCCTGATCAATCTCAGCACTGCAGGGAATACCTGCATCGTATTAGATATCAGGATGGAGGATGAAACAGTGAGGGGTCCCAGGTGAGCCTGGGACTAGGGCTCATTTCGCAGAGCAAGCTCGGGCGAAGGATGCAGAGACGGTCTTCTGTCTTAATGTAGTGTGGGTCAGGGGGGAAAACTGTGCCCCTGCCAGAGGCTGTGGGAAACAGATCAGCCCTTCTTATTAGTCTTGGCTCCTTCATCCATCCCTTAGGAGTGCTTCACTTCATAGTAACTGGGTACCTGTGACTCTTCCCGGAGACTGAGGGCTTTGCATCCAATTCAGTACTGTGGTCTGGCCCTCACCTCGTGGGATTCAGTTTCAGAGCCTCATCTCTACTCAGTGGACTTTCCAGAGACCTGGCTGGCCACTGATGGCCCCGAAGGAAGTGGGCAGAGGCAGCTTGGATTGGCCCACCCATCCCCACACCTACAAATCCCACTTTCCAACTGACATCACAAACTCAACCCTCCACCGCAGAAGGAGCGAGTCGCAGGAGGGCCGGAAGTTGAGATGATGACCTAGTGCAATTTCCAAGCCCATTTCTGAGGTTTCTGGTGCCGCCAGGAGCCCGTGGGGAGGCGCTGCAGAAAAAAGTCACAAAGGTTCATAATGTTGCATTCCTTGGGTGTAGCCGAAGACATGGAAGGTCTCTAAACACCATGGTCATTCCAGCTTTTCCCTGCCCTCTCCCGGCAGTGAGCCTGGCACAGGGCTGACTGTAGAACATGTGATTCACGGAAGCAGAGAGAAACACCATCCTTCTCACACCACACACGCAGGTATTGGATGGGGAGGAACCACTTCTAGAGGTAAAATCGATGGGTGGCCCATCTGTGTTGTCACAGCCACCTCTTCGTACACAGAGGTTGAATTTTTTTTTCCTAAATACAAGGGTTCGCTTCCACGAGAGGCAACTGAGAGGCCCTGAGAAGTGACTTCACGTCCACTCCAAAGCCATTTCAGCCACCAGAGTCCCGAGGTTCTAAGAATCAAGAAGTCTCAATGGGAGGGGTGATTCCCAGGCATCGCCCTGGGGAAAAAGCAGCACTGACATTATCTTAGAAATATTTCTTCTGTCTAGTGTGATAACAACTCACTCAGATGCTAAAAAGTATTAAAATATACTTCACC TCONS_00115218 . 3' 669 TCONS_00115218 . 3' 3874 EMBV3_13908 CAGCCCCAGTCTCCCCACCCGTGTTTTGGTTCCTGTTTTCTCCTTTGAAATGCAGTCCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25012 GAAGAATGAGGTTTGCGGGAGAGTTGAGAGGATGGAATAAATGCTGTGACTTGCACGTTC Gene GeneID:535401|EFCAB6:NM_001076057:189_cdna Constitutive 0 NULL GeneID:535401 5 GENE EFCAB6 FLJ23588 EF-hand calcium binding domain 6 EMBV3_26148 CAGTGCCCGGATCCAAAAGATGGACTCACCTAGCACTCTAGCCTTTCTGGCGTGATTTCT Gene BVT0102_113615 + 1 EMBV3_04601 GK000021.2:32113037-32117943 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36821 TTGGTTAATATCACTGTCTTGAACCATCTATATATTCAGTGTCACCTTCCACTGTTCCCC Gene BVV0102_454821 - 1 EMBV3_09791 GK000024.2:41874669-41913254 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42926 GAATGGAAAGTCTGGGAGAGAAAAGCTAAAGAAATGGGTTCTAGTTTCAGAATGTTCTTC Gene GeneID:525335|GLS:NM_001077964:8_cdna Constitutive 0 NULL GeneID:525335 2 GENE GLS MGC142652 glutaminase EMBV3_42851 GTAAGGACAACAGACACACAGAAAGAGAACAAAAGAGGGGGGAGTCAGTGAACTCAGGCC Gene GeneID:537195|CREBL2:NM_001076088:110_cdna UTR3_Alt 2 NULL GeneID:537195 5 GENE CREBL2 MGC139506 cAMP responsive element binding protein-like 2 EMBV3_41233 GCGGTCCACACACACTGTACGTCCTAAAAGTATTTTGAAAAATCATGTAACCCTTCGCAG Gene GeneID:514693|AGK:NM_001098969:658_cdna Constitutive 0 NULL GeneID:514693 4 GENE AGK MGC157181 acylglycerol kinase EMBV3_03382 CCAAGTAGAGGTGTGTCCTGGAGCAGTGGTCAGCGGCGGACAGATGTGCCCACAGCCCTA Gene GeneID:518371|DGKQ:XM_002688444:16_cdna Constitutive 0 NULL GeneID:518371 6 GENE DGKQ NULL diacylglycerol kinase, theta 110kDa EMBV3_20727 TTGTGGTGGACTGCTCAGCCTGTCCTTTCCCCATGAGAAGCTACTGCTTATGTCCACAGA Gene GeneID:780881|C9orf100:NM_001079800:71_cdna Constitutive 0 NULL GeneID:780881 8 GENE C9orf100 MGC142371 vav-like protein C9orf100 homolog EMBV3_41737 AGTTGCTCAGTCATGTCCGACTCTCTGCAACCCCAAATAGGCAAGGTACCCAGTGAAAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05953 TCCAGAGCTGCTCAAGGTGCACCCCACCCGCTGAGTCTGAGTTTTGTCGCTCTAAATGTT Gene GeneID:781217|ATMIN:XM_002694734:103_cdna Constitutive 2 NULL GeneID:781217 18 GENE ATMIN NULL ATM interactor EMBV3_38992 ATGGGACTTACCTCCTTTGACTCCACAAAAGGGAAAAAGGTGGATGGCTCTGTAAATGCC Gene GeneID:512552|LOC512552:XR_084067:651_cdna Constitutive 0 NULL GeneID:512552 25 PSEUDO LOC512552 NULL similar to putative nucleic acid binding protein RY-1 EMBV3_34054 CTGGGATTCTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTTCCTTCTCCAATTCATGAA Gene GeneID:618633|LOC618633:NM_001103302:5_cdna Constitutive 0 NULL GeneID:618633 21 GENE LOC618633 MGC148746 similar to Myeloid-associated differentiation marker EMBV3_32172 GTAAATCTACTTGTTGCAATGATGGACAGTGGCCGTGCTCCTGATAACAGTGCTAGTAAC Gene GeneID:532606|TASP1:NM_001034577:14_cdna UTR3_Alt 3 NULL GeneID:532606 13 GENE TASP1 C20orf13 MGC139584 taspase, threonine aspartase, 1 EMBV3_09791 GGGGAACAGTGGAAGGTGACACTGAATATATAGATGGTTCAAGACAGTGATATTAACCAA Gene BVV0102_454821 + 1 EMBV3_36821 GK000024.2:41874669-41913254 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26200 CTGCAGTTCCACACAAGCAATTATCAGTCCAAGCCCCAAAGGCGGAAGCTGAGTAAGGGT Gene BVT0102_401149 + 0 NULL GK000026.2:13576564-13613120 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35287 TCAGAAATGCTGGGGGAGGGGCATAGCATTGTGTTTCAACAGGTACCAGGTTATTCTGCC Gene GeneID:616201|LOC616201:XM_002699857:51_cdna Constitutive 0 NULL GeneID:616201 X GENE LOC616201 NULL similar to Chromosome X open reading frame 39 EMBV3_19313 CCTTCCCTAATATATTGAGGCTTTGGGGTAGGAGAAAAGTGCACAACCCACCCCCCAACC Gene GeneID:515187|CTNND1:XM_002693586:52_cdna Constitutive 4 NULL GeneID:515187 15 GENE CTNND1 NULL catenin (cadherin-associated protein), delta 1 EMBV3_03029 TTGAGAGAAGTGGTGGTCTCTGAAATCCGCTGTGTTCCACGTGCAGCTGTGTTAGGATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27184 ATGACACGACGCCCCATGCAGCCGTGCTTCTGTTCCTACAGCAGGGTTTTCTTTACCTTT Gene GeneID:525869|RAI14:XM_002696398:157_cdna Constitutive 0 NULL GeneID:525869 20 GENE RAI14 NULL retinoic acid induced 14 EMBV3_01375 TGTGTGTGAATACCAAAGATACAAACTGATCACCATGGGTGTACAGGGAATGAGTGGTCC Gene BVV0102_290603 + 0 NULL GK000010.2:54499705-54536536 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39134 CATAGATGTGGTCCGTGAAAGAGGAGGGGGTGGTGGTTGGTGGAGGGAGCTCTTACCTTT Gene GeneID:514322|ADCK4:XM_002694992:191_cdna Constitutive 1 NULL GeneID:514322 18 GENE ADCK4 NULL aarF domain containing kinase 4 EMBV3_24315 TTTTCTACTGTGACATACTCAAGATTGCCTCCACACACAGCCAGCAGATCCGCAACACGG Gene GeneID:524232|GPR119:XM_002699532:9_cdna Constitutive 0 NULL GeneID:524232 X GENE GPR119 NULL G protein-coupled receptor 119 EMBV3_35099 TAAACTATATCATGCCAGTTCAGTATGAAAAAAGAAGAACCCAAGTTGCCGGAAATCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39869 CGACTTAATGGCTGATGAAATCGGGCTGTGGGCTGTGTATGCAACTAACCAGAATGCAGG Gene GeneID:538499|OLFM3:NM_001098094:158_cdna Constitutive 1 NULL GeneID:538499 3 GENE OLFM3 MGC148672 olfactomedin 3 EMBV3_42372 AAGACTTGGGGAACTCTTGCCTGGAAGCCGAGAGGGATTTTGGGGTGCTGAGAGAGAACG Gene GeneID:100301293|LOC100301293:XM_002695708:311_cdna Constitutive 0 NULL GeneID:100301293 19 GENE LOC100301293 NULL hypothetical protein LOC100301293 EMBV3_20160 GTCTGGGTCATCGCTGACAAAGTCCAGGGGAGCCACAGCCTGAGCCGCGGAACCGTGTGT Gene GeneID:100336985|LOC100336985:XM_002698147:577_cdna Constitutive 0 NULL GeneID:100336985 25 GENE LOC100336985 NULL TECPR1 protein-like EMBV3_30361 CAGACAGGCTGATCCACACATACAAACTGGATAGACGACCTCATGCCCATTCGGGTACAT Gene GeneID:614835|LOC614835:NM_001076348:1282_cdna Constitutive 1 NULL GeneID:614835 13 GENE LOC614835 MGC139391 hypothetical protein LOC614835 EMBV3_19588 AGCTTTAGAATCTACATAAGTAAACACAGTATCAAAATACAGTCAGTACATTTTTGAGGC Gene BVV0102_278367 + 0 NULL GK000002.2:23595532-23644873 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00108233 1 XLOC_064141 NonCoding TCONS_00108233 XLOC_064141 NonCoding NonCoding - 2:23596687-23597004 - TSS79854 317 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00208369664388926 5.28852555258473e-05 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0745760139165669 0.619189308357506 -0.0261980696192902 0.602565121660951 AGGAGGGGCAATTTATATCTATTACACATGTTAGTACAAATTTGTATCTATTATAGATCTTATTGTGCTGCTGACTAGCCAATCCATTTTAGGAGCATCAGGTCACTGAAGAATGCTGATTTCTTAAGTGAAGTCAAACTTGACTCTACTTTGGGATGAAGGCAAGAGAGAAGACTGTTTACCCTCTGAAGTTTAAACGATAGCTTTAGAATCTACATAAGTAAACACAGTATCAAAATACAGTCAGTACATTTTTGAGGCAAAAATGTTACCTAACTTTTGCTTCGATTCATATTTTGTTAATTAGAGAAAAAAAA TCONS_00104674 TCONS_00104675 TCONS_00104676 TCONS_00104677 TCONS_00104681 TCONS_00104684 . 5' 1157 TCONS_00104674 TCONS_00104675 TCONS_00104676 TCONS_00104677 TCONS_00104681 TCONS_00104684 . 5' 1157 EMBV3_06209 ATGGCCGGGATCTACTACATGTTAATGCAGGTTTTTAAGGAGGAGAAGTACCTGAAGGAC Variant GeneID:541142|LANCL2:NM_001102256:44_cdna 624^806 3 EMBV3_11643 GeneID:541142 22 GENE LANCL2 MGC148337 LanC lantibiotic synthetase component C-like 2 (bacterial) EMBV3_13876 GTGTTTGGATTGGATATTGGACTAGGTGAGTCAGGCCTCTTGGCACCCTCCTCTGAGTTG Gene BVV0102_350457 + 0 NULL GK000001.2:83368961-83416493 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00590 GGCTTATTTCAGCTAAAACCTGGAAAATCTGAGGCTTAAGGTTGACTGTTACACTTCATC Gene GeneID:534049|C28H10orf58:NM_001034599:368_cdna Constitutive 0 NULL GeneID:534049 28 GENE C28H10orf58 C10orf58 MGC128811 chromosome 10 open reading frame 58 ortholog EMBV3_08105 CTCGGACCTTCAGAAAGAAGAATCTGTGGGATCTCAGGCGTTGGACCAGCTTTTGCCCAA Gene GeneID:522630|HRASLS5:XM_002699371:302_cdna Constitutive 0 NULL GeneID:522630 29 GENE HRASLS5 NULL HRAS-like suppressor family, member 5 EMBV3_07187 GGTGCTGAGTCCCAGAGAAAAAGACTCCGCGCGCCTCTCTGCTGTATACTGTGGTTTATT Gene GeneID:513758|DGCR14:NM_001100357:46_cdna Constitutive 0 NULL GeneID:513758 17 GENE DGCR14 NULL DiGeorge syndrome critical region gene 14 EMBV3_37104 TGCTGCTGACCCATCCTGCTCCATCTTACAGGAATGCCTTATTTCTCAAGACTCTCCTAC Gene BVT0102_259346 + 0 NULL GK000012.2:36166861-36187110 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00036863 TCONS_00036864 TCONS_00036865 1 XLOC_021250 NonCoding TCONS_00036863 XLOC_021250 NonCoding NonCoding LOC100848626 12:36179529-36186828 j TSS26742 868 1 TCONS_00036863_1 147 4 0.881611400383667 1.59953512828813e-12 0 2.06430395150443e-09 0 5.7228250030263e-12 0 0 0 0 1.12692779405406e-05 1.85797608239417e-14 4.11946213679785e-06 0 0 3.603495886944e-10 4.97556670228964e-09 0.00212494043584265 0 1.01679226607508e-10 1.17779956495884e-09 0 0 1.08952215463384e-23 2.89710244819356e-05 8.01503355139073e-15 4.85774481201211e-10 2.55481437081172e-15 0.000114202358794712 1.48388982481116e-05 9.68842312432107e-06 XM_003582869.2 LOC100848626 PREDICTED: Bos taurus collagen alpha-1(I) chain-like (LOC100848626), mRNA. 0.0 1471 100.00 0.93778801843318 0 noncoding 0 0 0 0 0.21217467331024 0.521327797814912 NA NA ATGGGAGCCCGGTGGGAGAGCTACCCCTTCGGACTAGGAGGCCGAGGCCGGGGAGCCCTGGGACGGCAGACAGGAGGGCTGGGGGGCGGGAGAGGGTGTCTGCCACACTGGAAGGCCTGGACCCCCCTCCCAGAGGCCGAGCTGGTCTATCTTCCAGGAGGAGGAAGTGTCCCCGCGCCGCCCCGGGCTCTTTTCGGAAACAGAGCGGAGGAACTGGCCGCACGTGCCTGTGACCACGCTGTCCGCGCAGCACCAGAGGGGGCAACGCCAGCCATCCAGGTCAAGGCAGCGCTCCAGCGGAAACGCGTGACCCTGACCGGCAGGGCCCTTCCTCTGTCTTCCCCAGCCCAAACGGAAAGAGGAATGTCAGAGCCAGAGCAATTTCACAAGCCCAAGCCCCACTTCCTCTCTGAAGCTGTGACTACTCGACCGGGTGATGGGTGACTGCCCTTTTCCTAAAGCATCTGAACTTACTGCAAGCACCTTTTGGTCCACTGAGTCATTCATTCACTCAAGTTTCTATCATAAGAGCCACTGTGTTCAGGTACAGAGTCTATGGGCAGGTCCTCCCGTGATGATGGAAAAGTTCTGCACATGTGTCTCCAGTACACACCTGCTGAATGCAGCCAGTAAGACTAAGGAACTAAACTTTATATTTGATTTAATGCTGCTGACCCATCCTGCTCCATCTTACAGGAATGCCTTATTTCTCAAGACTCTCCTACATTTGAATGAATGAATGAAAGAATGAACAAACGTTACTATTAAACCCTGAACACAACTGACACAGAGCAATGAAAATATTTATGCTGACAATAGAAAGCACTTAATTTCACTATTTCAGGTCATTAAAAATACCCTTGTACAA EMBV3_14335 TCCTTGAGAAGCAACGCGAATGCCGTCCAGATGTTGAGCAGCAAGTCAGAAAGGTCCCAA Gene BVT0102_131084 + 1 EMBV3_00790 GK000004.2:8494831-8559455 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08244 GAGGCTCCAAAAACAGATATTCCCCTGGGATCACCCACTCCCCCTGAATCTAAAGAGAAC Gene GeneID:783086|LETM2:XM_002698739:212_cdna Constitutive 0 NULL GeneID:783086 27 GENE LETM2 NULL leucine zipper-EF-hand containing transmembrane protein 2 EMBV3_01166 GACACGTATAGATTGGAGTTTCTGGTCACTGCCAACAGTGGTTTCATCTCCATGGGCACC Gene GeneID:788740|LOC788740:XM_002690718:386_cdna Constitutive 0 NULL GeneID:788740 10 GENE LOC788740 NULL similar to olfactory receptor 1317 EMBV3_17436 TCAGCCAGCTCAAGTGATGAGACATCCTCTGCCAACGGGGACAGCTTGTTCTCCATGTTT Gene GeneID:617808|LOC617808:XM_002694923:814_cdna UTR3_Alt 2 NULL GeneID:617808 18 GENE LOC617808 NULL hypothetical LOC617808 EMBV3_28860 CCTCATCTCTGTGGGATTTCACATGACTAAGCCTGATATGATCCGCAAATTGGAACAAGG Gene GeneID:518291|ZNF382:XM_002694951:81_cdna UTR3_Alt 2 NULL GeneID:518291 18 GENE ZNF382 NULL zinc finger protein 382 EMBV3_43149 CACTGTTAAAATTCAGAAGAAACAGAATAGGTAGGAAATGTTTTTTATTGTGTCAACATG Gene GeneID:783379|LOC783379:XM_002687646:819_cdna Constitutive 2 NULL GeneID:783379 5 GENE LOC783379 NULL similar to Uncharacterized protein KIAA1033 EMBV3_12448 TGCAGTGTGCAGGTACAGATGATGGTTCTATTGATGCATGTAAAGGGGACTCTGGAGGCC Gene GeneID:513197|CFI:NM_001038096:35_cdna Constitutive 0 NULL GeneID:513197 6 GENE CFI IF MGC128240 complement factor I EMBV3_30536 ATGAAGGAGCTGGAGCGGCAGCAGAAGGAGGCGTCTGATGAAGATGAGCGCATGTCAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02848 GGTACATCTATCTCTGTAAAATGGGTTTGAAACAGGTGCGTCCCCAAGCTGTTGCCATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12474 GGGAAATAGTACAGGAAACTCCTCCTCTAAAAAGATGGGTGTGGGGTGACAAGTGGAGGC Gene GeneID:527852|SERF2:XM_002696809:570_cdna UTR3_Alt 1 NULL GeneID:527852 21 GENE SERF2 NULL small EDRK-rich factor 2 EMBV3_03853 CTCTCCCCAACCCTAAGGGACCCATACCTCGTGCTTAAAAACAATATGAAGGCATCCATG Gene GeneID:617620|CORO2A:NM_001038220:44_cdna Constitutive 0 NULL GeneID:617620 8 GENE CORO2A MGC128280 coronin, actin binding protein, 2A EMBV3_05034 CCATCACGGTTGTACAACAAATTTGCTGCATGCCCAACTTGACAACAGCAATCATTGAGG Gene GeneID:519573|PDZD8:XM_002698518:127_cdna Constitutive 0 NULL GeneID:519573 26 GENE PDZD8 NULL PDZ domain containing 8 EMBV3_19692 GGATGTCCCGTTCTATGGATCCACTGGCAAAGAAGATCTTTAAAGGAGTGTTAGTAGCTG Gene BVV0101_072501 + 1 EMBV3_05273 GK000011.2:19645260-19659021 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024292 TCONS_00024294 TCONS_00024293 1 XLOC_014472 NonCoding TCONS_00024294 XLOC_014472 NonCoding NonCoding LOC100847505 11:19653940-19660721 = TSS17861 758 1 TCONS_00024294_1 90 5 0.888938053097345 0.000697508194765446 0.000687136326765983 0.000442489392940948 0.000616325441999809 0.000450660422735463 0.000393753209543605 8.6855821053633e-05 0.000508666771008334 0.00125727170641953 0.000616832495402111 0.000685966207917084 0.00126844634372103 0.000116804497290778 0.000317682197250355 0.00056720947352 0.0107116523786615 0.00306572275200757 0.00213625756959904 0.00157501938132565 0.00145205438166272 0.000956769201565251 0.00284356520975162 0.0160468539764875 0.00707223441882263 0.00193923760779165 0.00147614427571623 0.00184998052247248 0.00373534635356896 0.00129398504144008 0.00157784362657033 XR_227024.1 LOC100847505 PREDICTED: Bos taurus uncharacterized LOC100847505 (LOC100847505), 0.0 1359 100.00 0.992084432717678 NR_037880.1 CEBPZ-AS1 Homo sapiens CEBPZ antisense RNA 1 (CEBPZ-AS1), transcript variant 7e-84 315 85.82 0.358839050131926 0 noncoding 0 0 1 1 -0.0105597088983445 0.947874724845761 -0.0198084540355357 0.773835581902461 GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAAGCCGTTTCAGTCGTGCACAGTAAGCGGTAATTACGGTCTGGGGGCGGGGCCAACGCCCGGGAGGGGAGGGCTCTGCCACACTTTGCGCATGCGCAACCCCTGGAGTCCGCGCCTCAGGATGTCCCGTTCTATGGATCCACTGGCAAAGAAGATCTTTAAAGGAGTGTTAGTAGCTGAACTTATGGGCATTTTTGGAGCGTATTTTTTGTTTAATAAGATGAACACAAGCCAAGATTTCAGGCATACAATGAGCAAAAAATTCCCCTTCATCTTAGAAGTGTATTACAAATCCATTGAACAGTCTGGAATGTATGGAATCAGAGAGCAAGATCAAGAAAAATGGCTGAGCAATAAAAATTAGGAATCTGACCATCAATCAAAGTTTGATTTCAAAGTATTTCAAAGTATCAGGCAAGATTAAAATTCTGAAATTGACGAGGGTGTATTTTAAATATTTAAGGTTAACTGTAAATTTTAACTAAGTAAGAGGTTTTGTTCCTTGGAGTAACTGTGAAGAAGTGATGGAGGGTTTCTTTATTGTGTTATAACTAGAGTTTTGTTTACTACTTGAAATAAAGTGGTTCTTTAAAAAAACCTCCCCTGTAATTCTAAATATGTAAACCTTTCAAAACAGAAGAAATAATAAAACATTTTTAATATATGTTA EMBV3_23194 CTGAAGATTTGCTAGATCAGAATAAACTGCGGGGCTGGAAGGGCCCGTAGGTCCAATGTA Gene BVV0102_212239 + 0 NULL GK000019.2:41440071-41488338 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09198 AGACCAGAAGGGGGAGCTCTCACACCCTGGGACAATAGTAGAGCCCAACAGGAAGAATAA Gene BVV0102_111004 + 0 NULL GK000012.2:64141962-66226553 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00037125 TCONS_00037129 TCONS_00037126 TCONS_00037128 TCONS_00037127 1 XLOC_021311 NonCoding TCONS_00037128 XLOC_021311 NonCoding NonCoding - 12:66194410-66206146 - TSS26863 1715 1 TCONS_00037128_2 126 0.286880466472303 4 0.854196847038773 0.00729051223921875 0.0046670948240505 0.00625062134173691 0.0054948885740458 0.00758847092794954 0.00279506047038073 0.00372680405223685 0.00310132944481748 0.00545895167543915 0.00150294460895647 0.000288315215451549 2.45186217605953e-08 0.000846068654704131 0.00357723674016212 0.00208633544174239 0 1.06447760608309e-07 1.49594371842327e-07 0.00173859662355953 0.00383662793477486 0.00457992314464286 0 0 1.03203026263534e-07 0.00997854646259135 0.00343052798793326 0.00747345281806449 0.000145599375326015 3.45975980724141e-08 4.1829612214852e-08 XM_005209957.1 AK3 PREDICTED: Bos taurus adenylate kinase 3 (AK3), transcript variant 9e-36 156 72.43 0.172594752186589 0 noncoding 0 0 0 0 -0.495506353113336 0.133074351147482 0.0649803841407826 0.27427755983542 GGAGAGAGAAAACTCGCTGTCGGACTGGGCATGCGCAGGAAGGCAGGTCGTACTGCCCTGAGTGGTGCCTCTACTTCCATCGCTGGTGACGACCAGTATATCGCAAACTCCTGCGGCGGGGTGGGGTGTGGGGAAGCAAAATGAAGTATTTTCCAGGTGGCAAGTTCCCTTGCTCATCACCACTTGTTGTTGTGGATTTGATTCTATAAATTCTCTCAACCAGCCTCCCACTAACTGACGCTGGGTGAACAGAACTTCTCCATTTTCTTCGTGACTGATGCCAAAGACAACAGTGTTTAAGGCTAGTGGGTTCCTCTCTGATAAGAGCAGACTAACCATGGTATTGAATCCTATCAGTTAAATAGAGTTGAGAGACCAGAAGGGGGAGCTCTCACACCCTGGGACAATAGTAGAGCCCAACAGGAAGAATAAAGACTCCTTTTCTTTGCTGGCAAGGACACGACCAATGAAAAGTCGTGGACTCTGTTTACTGCAAGCCTCCCAATTTCCTTTTCCTCTCAATAAAAATGTTCTTCCCTTGGTGTCGGGAAGACTTGGCAGTGACTGGCCGTGGTTGCAGACCTTAAACTGCGATTCTTTGTTGATCCCCAGTAAATCCGTCTTTGCAGGAGACATATCTGGCAGTCTGTTTGTCTCAGGTCAACAAAGCCCATTCCTTTTGCCTCCACTTCCTGTCACTCTGATGCTAATTCTCTGTGCATCGTGCAAGTCTTTGTGGCTGTCCATGTGCGCCCACATGGTGAGGTCTGTGAGGTTTTTTTATAACTGTCTGGAGGTTTTTGAGTTTGCTCTCTTTATTTTCCTGTCTGAATTATGGATGAACTAAGGGAGATTCATCCACTATTCCAAAACTGTACCACCAGTGCCAAAGTTTTGCCATATCTGCCCCCCGCCCGACCCTGCCTCCGCTCCTTTTTTTTAAATCGCAATTTCCAGCCCATTAAGTTAATTAGTAAGCTTCTAATGGGCATTTGAAAAGCAATAGTCTGTGTAGTCTGTGGCTGTGTATTGTGGAATTTATTGAAATACTGTACCTCCTTACTGTACCTGTGTGTAAATGACTGTGCTTGTGTCTATCTTTCTTTGGAGATGCTCTGTTCACTCCCTCCCCTCTCCCCATTCTCATCAATCTGATTTTCAAAAAAATCTAGAAAACTTGCGTTAATATGTGTCCATAGATTAAATAAGACCAACAGAAATGTATACCTTAACTATATTGTTTTAAACCCACTAATCTCCACAGTGTCTCTTTTATGGAACGTTTTTTGTTTTTATTGAATAAACATTGCTTTACTTTGAGGGATGTTAAAATGTTAAAAGAAATATATTTGTTATTGTTGTATTTATTTTAAGAATTTTATATTATATCCTCTTAACAAATATCCATAGGAAAAATTTCTCTTGTGTCTCAGTATCAAGAATTGTCAAGTGTTACTATTATCTGAAAAACAACTCATAATTTATGAGTATTTTTAGGATATAAATTTTTAAGATGCACGCCTGATTCTTAAGCCTTGACACTTTGATTAAAGTCAGATATTTTAATATCATTGTATTAATGTGAATACTCCTGTAAATTTGCCTGCTTTTATAGTACTATTCAGCAATGTTCATTCTTCATTTATTCTTTTTCTCATTTACTTGTGAGACTTTTCTGTCTGATGCTGATAATAAAAACCTTCAATGAAGTACTA TCONS_00035507 r 5' 30786 TCONS_00035507 r 5' 20408 EMBV3_01245 AAAGATGTTGGAAGATCCATACGCTGCCTGGAGGCTGTTGTTTCTAGGGACACAAGTATC Gene BVV0102_401044 + 0 NULL GK000013.2:33369611-33451678 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048074 1 XLOC_028206 NonCoding TCONS_00048074 XLOC_028206 NonCoding NonCoding - 13:33422095-33423406 - TSS35250 1311 2 TCONS_00048074_1 72 1 0 0 0 0 0 0 0 0 0 0 3.13844105489396e-06 0 0 0 0 3.74233485613054e-05 8.0584442922498e-05 0 0.00210526232983173 0 0 0 0.000118866477130045 0.000104966148220498 0.000255753236440047 0 0.000123604739028567 0 0 3.70297867611998e-06 0 XM_005214217.1 EPC1 PREDICTED: Bos taurus enhancer of polycomb homolog 1 (Drosophila) (EPC1), transcript variant X4, mRNA. 2e-92 343 100.00 0.1441647597254 NM_001282391.1 EPC1 Homo sapiens enhancer of polycomb homolog 1 (Drosophila) (EPC1), 1e-71 275 92.51 0.14187643020595 0 noncoding 0 0 0 0 0.0274658511560856 0.801296993206922 0.0534260970940287 0.322505357794428 CCTGGGGAAGCCACCCCATGCAGCCACCGATAATGGAAGAAAGTCTGACTTTTTCTTTACCAGATATTTTAAAGATGTTGGAAGATCCATACGCTGCCTGGAGGCTGTTGTTTCTAGGGACACAAGTATCCAGCCTATATTGTTACAATTCTTTTTCCAGAACTGGCTTCTTCTTTGCCTCCACTAATGGTAAGTTTGTCATTTTACAACATTTATGCCATTACATCTTTGACTGAGCCGCCAGCTAAAAAAGGATTTTCATTGTGTTTCTTCTCACAAAACCAGTCTTGGTGTTTTTCTTTAGCTTTGATCTCTGCACATTTCCACCTAATCTTATCTGGTTAATTTTTACCAAAAGAAAAAAAAATTTTTTTTTAACCTCATGATTAAAGCAAAATATTTATAAATTATACTTTAATTACAATGAGCTAAAGGGAACTCAGCTATCTCAAGATGGACTTGTTTTGTGCCAGCAATGTTGGTAATGCCAAATATGTGCATATCCTCTTTATAAAAATTATGTATTACCTAATTTGTCCAGGACTAAATGATCAGCAGGCAAACTATAGATGTAGTTTGGTTTGGTGTGAAATGGGCCTATTGTAGTTTTCTTGATGGATTGCTTAGATACAAACTACAGAAAAGCTGCCCTTGGTATAATGAAGGTGGAGATTGACATAACCGGGTTTATATTAAGTTATGGCTGTTACTAAATAGTGGATCTTTTATTTGCTGATCAGATCTAAACTTGTATTCCATGTTAGTAGTTCCCTGAGGCTCCTCATTAGATAATCTTTGCAGATCTAGCTTGTTTTTCTCCAGAAAGGTAACATTTGGGAGACATTTTGTAATTTTTGGCATTTTTCTAGTTTTTTTTTTTTTTTTTTCTATTTGCACACGGTGGGAGATCTTTTTTGTTTTGCATTGATCTGTGTTGGTGGCGCTGTAGCTCTCCTCAACAATTTATGTCAGTTTCACTAAAAGAAAAAAGGAGGAAAAAAAAAAAAAGAGGTGGGGCAACATTTGATCTATTATCTTCTCTCTTTATTTCCTTAAAGAAAGTTTGATTTGGTCGAAGGGAATTATTCAGTTGTATTGTTTTACTGTTTTCTGTGAACTGTGAACTATGGGTGAGAAGAGACACGTCGTCATAACCCGTCAGGGAGCAGCAGGCCAAGTGTGCAGTTTGCAGTTGTGTATTATCTGATCTGATCATCTCTAGATCACAATTTTTTTCAGTAATAAGCTGTCTGTTTATCTTTTCTTTCCTCAGGAACATTTTGTATTTTTCTTCTATTACAATATCATCCA TCONS_00042502 . 5' 28207 TCONS_00042502 . 5' 28207 EMBV3_27057 TTTTCCCTCTGCCCAGCGTTCCTATCCTGACCCAGACTTCAGGCGGGCCCCACGATCTCA Gene GeneID:510220|CNPY3:NM_001075439:252_cdna Constitutive 0 NULL GeneID:510220 23 GENE CNPY3 MGC140466 canopy 3 homolog (zebrafish) EMBV3_15356 GTGAGGATGCTCCCAGCCAGGAAGAAGACAAAGCTAGTGATTGAGCTGGAACTTAGATTC Gene BVT0102_051996 + 0 NULL GK000010.2:29421045-29495918 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013353 1 XLOC_008100 NonCoding TCONS_00013353 XLOC_008100 NonCoding NonCoding - 10:29448456-29451564 - TSS9938 744 1 TCONS_00013353_1 70 0.331989247311828 2 0.761184422272288 0.0122524481942228 0.006876789817165 0.0105911106469015 0.0118590814356215 0.00742899408365857 0.000895225192878607 0.00561772350256685 0.00473813197316527 0.00578445184205127 0.000154846730234408 0 0 0.00027381605797076 0.000132774305119021 5.27547982784458e-05 0 0 0 0.00376137085389527 0.00441839820160259 0.00236285219221565 0 0 0 0.00243585147324631 0.00261837374633006 0.0032091445811471 0 6.52499861975266e-06 0.000177781396214468 NM_001103282.2 HERC1 Bos taurus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA. 3e-94 349 91.13 0.331989247311828 0 noncoding 0 0 0 0 -0.335422219967472 0.410015460741635 -0.0522753642542534 0.352198301945161 GGACAGCCCTGAGAGTAAAATGGAAGTCAGCTGCGACCTGTTGAGAGAAGGAAAGAGGCAGGTCTGGGCTTGATGGGGAAATGAGCGAATCTGAAGGAGGTAAAGGAATAGTGGGAACAAAGGGCCCCCTGAGGAGGCTGCACACTAAGGAGAAATGGATGGCTGGTAGGTGAGAGGAGCTTCAGAGAGAAGCGATTTGTACCCAAGTTCGACAGCTTCATGGTTCTGCCCAGGGAGCACTGCGTTCATGAAAGTGCATTAGGAGCATCTAATGCCTGGACACTGGAGTCACATGAGATGTGAGGATGCTCCCAGCCAGGAAGAAGACAAAGCTAGTGATTGAGCTGGAACTTAGATTCCCTGTGGAAAAGGGAAAAGACAAATAAGAGCAAGGACCACCTAATGAGGATCTGATGTTTTCTTCTATCCACACTTCCTACAAAGGCCTGCCACCTCTAAACCAGCAGGTGGTTCAGCTTTCTACTACAGCAAAAACTATGCAGGTCAAGAAGCAACAGTTAGAACTGATCATGGAACAACAGACAGGTTCCAAATCAGGAAAGGAGTACTTCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATACAGAGTACATCATGAGAAATGCTGAACTGGATAAAGCACAAACTGGAATTAAGATTGCCAGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAGAG TCONS_00013352 s 3' 27413 TCONS_00013352 s 3' 27413 EMBV3_04423 ATTCGGAAGTGTCAGGAGGCAGCTCGCCAGAAAGTGGTTTCTGGAGAAGTTAAAGCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42994 AAATGGCAGTTGCTTGCGTGACCGTTGGACTTAGGAAGGGACCGAGTGCCAAGTGCTAAT Gene BVV0102_198182 + 1 EMBV3_00236 GK000012.2:14126890-14136517 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29928 CCTTAAAGTTACCTGTATGTGTTTTATATGTTGGATATAAATTATCCTGTCGTGGAACAT Gene GeneID:614920|GORAB:NM_001167897:114_cdna Constitutive 0 NULL GeneID:614920 16 GENE GORAB NTKLBP1 SCYL1BP1 golgin, RAB6-interacting EMBV3_38790 ATCTTGCCGCCTGGAGTTTCTCTGCAGACCTCAAGGTTTGTTATCGGGCAGCAGGTGGTG Gene BVT0102_080528 + 0 NULL GK000018.2:13753850-13810240 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05288 TTCAGTCTTGTCAGACTCTTTGCTACCCTATAGATTGCGGCCTGCCAGCCAGGTTTCTCT Gene BVV0102_101059 + 0 NULL GK000001.2:54396770-54481376 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00003351 TCONS_00003350 1 XLOC_000838 Coding TCONS_00003350 XLOC_000838 Coding Coding - 1:54471045-54474304 - TSS1723 3259 3 TCONS_00003350_2 99 0.926664621049402 1 0 1.04370124585335e-06 0 0 0 0 0 0 0 0 4.07897721655721e-05 4.52521570938084e-10 0 0 0 0 8.76223115594974e-05 6.62249753603156e-05 0.000353628635874392 0 0 0 0.000187925077855078 0.000232236835719131 9.77370108092686e-05 0 0 0 1.11068647899289e-08 3.00812004735169e-11 0 XM_005227554.1 MMGT1 PREDICTED: Bos taurus membrane magnesium transporter 1 (MMGT1), 1e-133 482 85.47 0.115679656336299 0 coding 0 0 0 0 -0.126309868335411 0.426621582371505 -0.00472540686226504 0.943461171784214 ATACATGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGAGACCCCAGAGACAGCAGCCCACCAGGCTCCACCTTCCCTGGGATTCTCCAGTCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACTCAGTCGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCGTCCACGGAATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCAATGCATGAAAGTGGAAAGTGAAAGTGAAGTTGCTCAGTCACAACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGTTGCCATTGCCTTGAGGTATACTTTTTCAGATTATTTTCCATTATACATTATTATAAGATATAAAATATTCCTTGTGCTATACAGTAGGCCTTTATCTGTTTTATATATAGTAGTGTGTACTCATTAATCCAAAATTATCTGTTTATTCCTCCTCCCCCTTCCTCTTTGGTAACCTTAAATTTGTGTTCTACTTCTGTGATTCTATTTCTGTTTTGCAAATAAGTTCATTTGTGTCATTTTTTCTTTTTAGATTCCACATATGAGTGATATTTGCTTTTGTGTGATGTATTTCATTTAATATGATAATCTCTAGATTCATCTGATGCTGCTACTGCTGCTAAGTCGATTCATCTATGTTGCTGCAAATGGAATTATTTCATTATTTTTTATTGCTGAGTAATATTCCATTGGTATGTATTCCAATGCACACACACCACATTTTCTTTATCCACTCATCTGTTGTTGGATATTTGGATTGCTTCCACATCTTGGCTATTGTAAATAGTGCTACTATGAACATTGGAGTGTATTTTTTCCAGCTAGTTTTTGTCTTTTCTGGGTATATGCCCAGGAATAAGATTGCTGAACCATATGCCAACTCTGTTTTTAGTTTCTAAGCAACCTGCATACTGTTCTCCATGGTGATTGTACCAGTTTATGTTTCTACCAACAATATACAAAGGTTCTCTTTTCTCCACACTGTCCCCAGAATTTATTATTCATAGACTTTTTTCCACCACTGGGCTGCTGGCCTTGCAGGGTCTTAGTTCTCTGACTAAGAATCAAACTCAGGCACCCAGCAGTGAACTTTCTGAGTTCTAACTACTGGACCACTGGGGAATTCCCTGTTTATAGACTTTGATGATGGGCATTCTGACCACTGTAAGGTGTTACCTATTGTAGTTTTGATTGATATTTCTCTAATAATTAGTGATGTTGAACATCTTTTCATGTGCCTTTTGGCCATCTACATGTCTTCTTTGGAGAAGTATCAATATAATATTCCCATTAATAGAATGCAGGAAGAAAAAAACACATCTCAATTGATGCAGAAAAAGCATTTAACAAAATCTAGGAAGATTCCCTGGAGGAGCGCATGGCAACCCACTCCAGTATTCTTTCGTAGAGAATCCAATGGACAGAGAAACCTGGCTGGCAGGCCGCAATCTATAGGGTAGCAAAGAGTCTGACAAGACTGAAGCGGCTTCACGTGCACACATACACAGAACACTATTTCATGATGAAAACGTTGAACAATCAAGGAATAGAATGGAACTTCCTCAATGTGGTAAAGGTCACATATGAAGAGCCCACAGCTAATCTCATACTCAAGGGTGAAAAGCTGAAAGTTTTCCTCCTAAAATCAGGAACAAGGCAAGAACGCCCATTTTTTACCACTCCTGTTCAACATGGTGCTGGAAATTCTAACCAGAGAAGTTAGGCAAGAAAACAAAAAACAAAAACATTATCTTACTTGGAAAGGCAGAAATGAATTTATGTCTATACACACACAACATGGTATTACATATAGAAAACTCTAAATCATCCACCAAAAACTATCAGAGCTAATTAGATTTGCAGAGTGTAAGACTCAACACATGGAAAAGTCAGTTGTATTGCTTTATACTAGCATTGATGATCTGAAAAGGAGATTAAAATGATTCAATTTACCATAGCATCAAATATGACATAAAATACTAAAGAATAAATTAAGAAGGCATAAGACTTGTACACAGAAAACTATACAGCATTAGTGAAAGAAATTACTTTTTCCCCTTAGTTAATTAGTATGATAAAACAGAAACCCCAAACTGATCAATTTCAAATGTTGAAACACACTTGTATTTTTTTATACTGCTAGCTTATCATGATTCATTTTGTTATTATATTTTATATTTAAAAAATTTATACCAAAGAAAAGTTGAGAGAACAGAAATAATTTACCATTTGTTAACATTTGGCCATATTTGATTAACCTCATTTTCTATTTGTTGTTATTTCCCTGCCAAATAGAGTAAGCAGACACATTCTTGGCCCCTCAATACATCTTCTAAGAATAAGGACATTCTTTTCCATAATCATGCTATCATTATGAAACCTAAGAAATAAACGTCCATTCCATAATAGAATCTAATGTCTAGTTCATATTCAAATATGTTTAATTGTCCCCAAAATATGTTCTGTAGTTTTCTTTTAAAAATCTAGGCTTGAATAGAGTCTTAGACCTTCTATTTGATTGTTATATCTTTTTAGTTCCTTTTAATGAAAAAAGATCTTGTGTTTCTTTTTGTTTGTTTTTAATGACATTGACAAAGGTCAGTTTTCTTGTACAGTATACTATGTTCTGGTTTGTTTGTCTCCTTATAGTGTTCTTTGAATAATTTTCTATATTTTCTGTAACCTAGAAATTAAGCCTGGAAGCTTGATTAGACTCAGATAAAACATTTTTGTCAAGAATACTTCATGCATGAGATTGAGGACTTTATACTGCATTATGTGAGAAGGTACACAGATTTCTCATCATTATATTAAAAATATTAACACTTTATTAAAGTGGTGACCACCAGATTTCTCCAAGGTCTAGATGCAGATTTCATTTTGGAATTTGTAACTACTCTTTAAGGTGATACTTTGATGCTATGTGACTGTCTCGCCTCTTCCCAACAAACCTTTCCTTAATGAGTTTTAGCAACCAATAGTCATCCATATCTGAATCAATAATTACAGAAGGTGGCAAAATCTTATCACTTTATTCAATTTTTAGCTGACGTTCTACTGTAAAGAAGAACTTTTCTTTCCCTCTTTCTTTTTTGAGTACCATTATGGCCTCATGATTAAAAATATTTTAAAAATTTATTTATGTTTTAATTAAAATTTTTATA TCONS_00003353 TCONS_00003354 TCONS_00003355 TCONS_00003356 TCONS_00003357 TCONS_00003358 s 3' 5187 TCONS_00003353 TCONS_00003354 TCONS_00003355 TCONS_00003356 TCONS_00003357 TCONS_00003358 s 3' 5187 EMBV3_07968 CTGGCCCTACTGGATGCACACTGGATGCCGGGTTCTGAGTGATCTATCTGACTTCTACAA Gene BVV0102_089343 + 0 NULL GK000008.2:69604708-69724696 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38508 TTCTCTGAAGGAGCCATCGGCCACTTTGGCCAGCATGTTGAGAAAAGAGATCTGTCAAGG Gene GeneID:782247|ARHGEF3:XM_002697002:390_cdna UTR3_Alt 2 NULL GeneID:782247 22 GENE ARHGEF3 NULL Rho guanine nucleotide exchange factor (GEF) 3 EMBV3_08437 TCAAAATCTGGGCTTTCCTGGATGTTAAGTTTGTGGAGCGGATCCTAAAGAGCCGGGAGG Gene GeneID:539103|FBXO39:NM_001037613:147_cdna Constitutive 0 NULL GeneID:539103 19 GENE FBXO39 MGC133751 F-box protein 39 EMBV3_07867 CTGGTAGAGCTGGGCAGTGACCGGAGCCTGGAGGACTTCAGTGGCCAAACCCCACTGCAT Gene GeneID:505486|ASPG:XM_002696848:688_cdna Constitutive 0 NULL GeneID:505486 21 GENE ASPG NULL asparaginase homolog (S. cerevisiae) EMBV3_01486 CATCCAGGAGTGGTGCAGGCAGAAGTGGATGGCCGAGCTGAGTAAGCTGGAGGAGAGGCT Gene GeneID:614897|SLFNL1:XM_002686536:751_cdna Constitutive 0 NULL GeneID:614897 3 GENE SLFNL1 NULL schlafen-like 1 EMBV3_07257 AGGAGGGCCTAGAGGAGCTATCCCACATTGAAGATCAGAAATGGCGGCAGTGAGGAGATA Gene BVT0102_192680 + 0 NULL GK000001.2:107009694-107114791 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00111752 TCONS_00217101 TCONS_00158120 TCONS_00111518 TCONS_00047004 TCONS_00240157 TCONS_00018763 TCONS_00243949 TCONS_00080564 9 XLOC_067652 XLOC_131417 XLOC_096574 XLOC_067418 XLOC_027141 XLOC_146821 XLOC_009445 XLOC_150314 XLOC_049448 Coding TCONS_00217101 XLOC_131417 Coding Coding SIL1 7:51956553-52144488 j TSS161754 1042 1 TCONS_00217101_1 282 0.128598848368522 8 0.994498068470846 0.00179660606755016 0.00129568048172085 0.000591170308153146 0.000656663672850932 0.000592615020772125 0.000174807742051769 3.57666472614543e-05 0.000408569523409771 5.64367345352931e-05 0.000848202098434021 1.36474856432421e-06 2.12191978713933e-35 0.000254107890823438 0.000828171286464786 0.000598714598951763 4.62418148775231e-27 0.00144513741468576 7.57353441326832e-26 1.39548518513702e-52 5.37391436737251e-06 2.94318023800888e-112 6.5250657004253e-62 7.3618729912377e-33 1.23959993691322e-30 1.20132233435746e-06 3.01958477198193e-07 0.000479105674713035 5.42909694181447e-05 5.6290910040934e-27 3.343829745841e-05 NM_001075808.2 SIL1 Bos taurus SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae) (SIL1), mRNA. 0.0 1606 99.89 0.856046065259117 NM_022464.4 SIL1 Homo sapiens SIL1 nucleotide exchange factor (SIL1), transcript 0.0 1018 84.96 0.856046065259117 TCONS_00217101_1 sp|Q32KV6|SIL1_BOVIN SIL1_BOVIN Nucleotide exchange factor SIL1; 9e-178 503 97.01 0.946808510638298 0 coding 0 0 0 0 -0.139259996251264 0.473289978929406 0.0222883141635787 0.737994960464666 ACGGGTTCTGACGGTGGCCGTCGCGTCTGCGTACGGGGAGCTGGTTGCCGCAGCGGCCGCCTGGAATTGTGGGGATTGTGTCTGCCCCTGGGCTGCCGGGCGGGAAGCCGAAGGCCTCTAACTATGCCTCACCAGGGCCTGCTCCTTTTTAGGATGGCTCCTCTGTGCGTACTGCTCAGCATGCTGATGGTCTCCTGCTTCAACTTCTGCCTGTGTCATAAGAACTCGGAATTTGCACTGACCAACCCAGAGAAGAGCAGCACCAAGGAAACCGAGAGAAAGGAAACAGAGGAGGAGCTGGAACCCAAGATTCTGGAGGTGTTTCACCCGACCCATGAGTGGCAGGCACTTCGTCCAGGTCAGGCTGTTCCTGCAGGATCCCACGTGCGGCTGAATCTCCAGACTGGGGCAAGGGAAGTGAAACTCCACGATGAGGACAAGTTTCAAACTAATTTGAAAGGGTTGAAAAAAGGCAAAAGGCTGGACATCAACACCAATACCTATACATCTCAGGACCTCAAGAACGCACTGGCAAAATTCAAGGAGGGGGCAGAGATGGAAAATTCAAAGGAAGACCAGGAAAGGCAGGCCAAAGTTAAGCGGCTCTTCCGTCCCATTGAGGAGCTGAAGAAGGACTTTGAGGAGCTGAATGTTGTCATTGAGACAGACATGCAGATCATGGTACGATTGATCAACAAGTTCAATAGTTCCAGCTCCAGCCTGGAAGAGAAGATTGCTGCACTGTTTGATCTCGAATATTATGTCCATCAGATGGATAATGCACAGGACCTGCTTTCCTTTGGTGGCCTTCAGGTGGTGATCAACGGGCTCAACAGTACAGAACCCCTGGTGAAGGAGTATGCGGCATTTGTGCTGGGGGCTGCCTTTTCCAGTTTTGATTTGTTTTCTGCGCGGGCGCAGGAGGGCCTAGAGGAGCTATCCCACATTGAAGGTCAGGAAGGGCGGCTGTGAGGAGATACCCCTCGTCCAAGGTAAACAGCAATGGCTGCGCTTTGCTGGAGCAGCCGTGAAGAGATACCCC EMBV3_24908 CGTCCACTGGTACTTTATCCACAACAAACGAAACAGCAGCAGGTGATGATGGAGATGAAG Gene GeneID:507869|TPR:XM_002694251:222_cdna Constitutive 0 NULL GeneID:507869 16 GENE TPR NULL translocated promoter region (to activated MET oncogene) EMBV3_16802 CTCCCCTTCCCCTACTCTCCTCCCTCCTTCCCTTTGGGATCATGCTACTATGACGGAAGT Variant GeneID:510201|STRAP:NM_001015567:32_cdna 58^780 3 EMBV3_16833 GeneID:510201 5 GENE STRAP NULL serine/threonine kinase receptor associated protein EMBV3_13047 TCAACCTGATCGACGAACTGTACGACCGCCACGTCAACCTGGTCTGCACCGCCAGTACCT Gene GeneID:100300543|LOC100300543:XM_002683901:1_cdna Constitutive 0 NULL GeneID:100300543 Un GENE LOC100300543 NULL similar to CG8520 EMBV3_42972 GCAGCGGGGAGGAGTCCTGGCTGGGCTGAGCGGAAGATGCTTCAGAAAGAGCTCAACCAT Variant GeneID:505679|S100A16:NM_001075218:79_cdna 57^270 2 EMBV3_09705 GeneID:505679 3 GENE S100A16 MGC140605 S100 calcium binding protein A16 EMBV3_09503 TGCAATCCCTGTGCCACGACGAATGCCTGCGGCAAGACCATCACACCCTGCATCTCCAGT Gene GeneID:618453|KRT31:NM_001076506:222_cdna Constitutive 0 NULL GeneID:618453 19 GENE KRT31 MGC139924 keratin 31 EMBV3_18631 TCTGAAAGACCGTGGATACTTCACACGCACAGGGCCCACTGTACAAATGCATGTCTGGTA Gene BVT0102_101612 + 0 NULL GK000005.2:25631238-25633160 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194223 TCONS_00194226 TCONS_00194233 TCONS_00194232 TCONS_00194222 TCONS_00194227 TCONS_00194230 TCONS_00194229 TCONS_00194231 TCONS_00194228 TCONS_00194235 TCONS_00194224 TCONS_00194225 TCONS_00194234 1 XLOC_117694 Coding TCONS_00194234 XLOC_117694 Coding Coding PDE1B 5:25631976-25647802 j TSS144974 2830 1 TCONS_00194234_4 425 14 0.822053712480253 0.000292847778191211 4.30202320176403e-56 0.000355835178497602 0.000203216651949787 6.38807348829036e-05 0.000141029612599235 4.47447591848461e-05 1.81650134282881e-12 7.7728295247228e-05 1.52020338625157e-11 4.04120275961324e-20 1.16250112957822e-11 2.71578527988139e-15 4.70360138408988e-18 4.85504544659317e-38 0.000481217169912949 3.77492561291916e-06 0.000164226109623818 8.38632194910321e-05 0.000102677552929961 0.000758549883247605 4.37495864731374e-12 0.000217508405093724 2.36960594825709e-12 0.000552125419525681 2.1378641234511e-05 0.000101848085893859 9.01545859733827e-25 3.75099859036693e-05 9.89566852198063e-05 XM_005206092.1 PDE1B PREDICTED: Bos taurus phosphodiesterase 1B, calmodulin-dependent (PDE1B), transcript variant X1, mRNA. 0.0 2542 99.93 0.498939929328622 NM_001165975.2 PDE1B Homo sapiens phosphodiesterase 1B, calmodulin-dependent (PDE1B), 0.0 1838 92.12 0.448056537102474 TCONS_00194234_4 sp|Q01061|PDE1B_BOVIN PDE1B_BOVIN Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B; 0.0 858 99.28 0.978823529411765 2 coding 0 0 0 0 -0.185879088609699 0.15407530016888 -0.00458971592958622 0.930365918424074 GCGCACATCCATTCCGCACCGCAGAGCCCGGGTTCTTCCCTTCCTAACCTGAGCGGGACCAAAGCCTGGAAGAGAGAGAGGGGGCCTTGGTCCCGCAGGCTCTTCGTGGGTTGTCCCGTCACTTCGCCCTCTGGGCTGGAAAGACCTCTCCAGCTGCGCTACATGGTGAAGCAGTTGGAGAACGGGGAGGTAAACATTGAGGAGCTGAAGAAAAACCTGGAGTACACAGCTTCTCTGCTGGAGGCCGTCTATATAGATGAGACTCGGCAAATCCTGGACACGGAGGATGAGCTGCAGGAGCTGCGGTCTGATGCGGTGCCTTCAGAGGTGCGGGACTGGCTGGCCTCCACCTTCACCCAGCAGACCCGGGCCAAAGGCCGCCGAGCGGAAGAGAAGCCCAAGTTCCGGAGCATCGTGCACGCGGTGCAGGCTGGCATCTTTGTGGAGCGGATGTTCAGGAGAACGTACACCTCTGTGGGCCCCACCTACTCCACTGCCGTCCTCAACTGTCTCAAGAACGTGGACCTTTGGTGCTTTGATGTCTTTTCCTTGAACCGGGCAGCAGATGACCACGCCCTGAGGACCATCGTTTTTGAGCTGCTGACTCGGCACAACCTCATCAGCCGCTTTAAGATTCCCACTGTGTTTTTGATGACTTTCCTGGATGCCTTGGAGACAGGCTACGGAAAGTACAAGAACCCTTACCACAACCAGATCCACGCAGCTGACGTCACCCAGACGGTCCACTGCTTCTTGCTCCGCACAGGGATGGTGCACTGCCTGTCGGAGATTGAGGTCCTGGCCATCATCTTTGCTGCAGCCATCCACGACTATGAGCACACTGGCACTACCAACAGCTTCCACATCCAGACCAAATCGGAATGCGCCATCCTGTACAACGACCGCTCAGTGCTGGAGAATCACCACATCAGCTCGGTTTTCCGAATGATGCAGGACGACGAGATGAACATCTTCATCAACCTCACCAAGGATGAGTTTGTAGAGCTGCGGGCTCTGGTCATTGAGATGGTGTTGGCCACAGACATGTCCTGCCATTTCCAGCAAGTGAAGTCCATGAAGACAGCCTTGCAGCAGCTGGAGAGGATTGACAAGTCCAAGGCCCTCTCTCTGCTGCTTCATGCTGCTGACATCAGCCACCCCACCAAGCAGTGGTCGGTTCACAGCCGCTGGACCAAGGCCCTCATGGAGGAATTCTTCCGCCAGGGTGACAAGGAGGCTGAGCTGGGCCTGCCCTTTTCTCCGCTCTGTGACCGCACTTCCACCCTCGTGGCGCAGTCCCAGATTGGTTTCATCGACTTCATTGTGGAGCCCACGTTCTCTGTGCTCACCGATGTGGCTGAGAAGAGTGTCCAGCCCACCGGGGACGACGACTCGAAGTCTAAAAACCAGCCCAGGCATCACCAACCAGATGTCCATTGACGAACTGTCCCCTTGTGAGGAAGAGGCCCCAGCCTCCCCTGCCGAAGACGAGCACAACCAGAACGGGAATCTGGACTAGCGGGGCCTGGCCAGGTCCTCACTGAGTCCTGAGTGTTCGATGTCATCAGCACCATCCATCGGGACTGGCTCCCCCATCTGCTCCGAGGGAGCATGGACGTCAAGGAACAGAAAACCCACCCGAAGGACGAATGCTAGAGATTGTGGGGTTGGGGGAAGGGCCCCTCCCCACCTGACACCCACTGGGGTGCACTTTACTCTCCTGGTGGCAAGACTGGGGAACTTCGGGCTCCCAATGGTCACTGTGTCCATCCCCCTGCCTCTGGACTCTCCCCATGGCCAGATGACTGGTTGGAGGGGAGCTTCCTGGAGGTTTCCCAGGGCTTGGGGGGAGGGTCAGAGATGCCAGCCCCCTGGGCCCTCCCCCATCCTTTTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTTCCTCAGCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTCCCCCTTTTCCTCCCCTGGGAGGGGCTGGAACAGGATAGGAAGCTGGGGGTTTTCAGAGCTCTGCACAGGGCGGGGTGTGGGCTCCTTCAGGGCATGGCACCTTTCTAGGGCCTGGGAATGGGGGCATCCTCTGTACCCCAGACCTGCACTGCTTTACCCCCACCCCCGCCCAGACTCTGCAGTCTCCCCTCTCCCCCATTCTAGAATGGCGAATGGGGGAGGAGGAGCCAGAGCCACCAGGGGCTGAGGGGGGGCGGTCCTCAAGGACTTGGGACGGGTCTCAGCCCTGGGGCTTGTCACCTGTCCTGAACCTGTCGCCTCCTTCCCCTCCCCTGGGGCCGGGAGGCTCCCATCCGACCAATGTCTGTAAAGTGCTTTGAGGTCTCCCCAGCAGAGCACCTTCAGGATGCGTCCTAGAGCACAGGCAGGAGAGCTGGGATGGGTCAAGGGCGCATGGGGAGGGTGACAGAGAGGGTCCCTCCCCTCCCAGCCCTGGCCCAGGAGGCCCCTTCCTCGGACAAGTGGGGAGTGGACAAGTGGGGAGTGGCGGGTGGAAGGCAGCCAGCAGCCCAGCCAGGCCCCCGCCCCTTCCTCTCCTCAGGCTCCTCCGGCCCCGCTCTGTCCCAGAAAGGCCCAAGTCCAGTGACTGCCCTCCTCCTTCCTTGTAAATACCAGACATGCATTTGTACAGTGGGCCCTGTGCGTGTGAAGTATCCACGGTCTTTCAGACCTGCCACCTGCCACTCGTCCCTCCTACCCCACCCAGAGAGGGGTAGAGACGCATGTGACTGACCCCTGTCCTCGGTCTCTCGGAGCCCTGCTATAGCCAGAGATCAATAAAGAAGGGAGACCAGGCCTG EMBV3_15551 ACGCTGTGTATGAAAAGATTGTACACTGTCAGAAGGCAGCCATGGAGTTCCACGAGCACC Gene GeneID:510408|PLCL2:XM_002685174:23_cdna UTR3_Alt 2 NULL GeneID:510408 1 GENE PLCL2 NULL phospholipase C-like 2 EMBV3_13885 TTGCTGATTGTGCCCTACCCTTTGCGCCTGACTTTTCCTAGTTGTCCTGGTGCTAACACA Gene GeneID:782743|MTMR4:NM_001102328:75_cdna Constitutive 2 NULL GeneID:782743 19 GENE MTMR4 MGC139322 myotubularin related protein 4 EMBV3_42769 CTCCATCGATGAGGAGCTGGTCTATGAAAATCATACAGTTTATCGAGAAAGAGAATAGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16734 CTAGTAAGACACCACACAACCTGTTTGTGTCTAAGGGTTTAGACCCCTAACTTACTTAGA Gene BVV0102_342250 - 0 NULL GK000008.2:24930517-24945087 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10812 GTGTTTGCCATTGGAGTCTGCACCGGTCTGCCAGTGGCAGCCGGTTCTGGGATCCCCGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31630 AGTGAGAATTTCAGTAGAGACAGGAAATAAAAGAAACTACCAAACAGAAATCAAGCACTG Gene BVT0102_218331 + 0 NULL GK000023.2:1650040-2451705 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08895 GAAGAGAGGATACCCTTTGTATGTTCACTTTATTAATGGCGAATATACAGAGGGAGACTC Gene GeneID:100313354|MIR1185:NR_030887:78_cdna Constitutive 0 NULL GeneID:100313354 21 GENE MIR1185 bta-mir-1185 microRNA mir-1185 EMBV3_20808 TGGGATGTGTGGGGCTCGGGCTCTGCGTCTGCGTCCAACAATAGGATCAGCGACAACAGT Gene GeneID:506471|ARFGAP3:NM_001075264:901_cdna Constitutive 0 NULL GeneID:506471 13 GENE ARFGAP3 ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 EMBV3_07003 AACTAGGCATTGGGCCTCAAGTATCTGAGTGGAAGGCGGGTGTACAGTGTGCCCTCCCTT Gene GeneID:522540|LOC522540:XM_002696546:5_cdna Constitutive 1 NULL GeneID:522540 21 GENE LOC522540 NULL similar to myeloid-associated differentiation marker EMBV3_07627 TGCCTACTTTACTACTTTGTGCTCACCTACACCTCTGACTTTACGGGGGCTGTCCCCCAC Gene BVV0101_031913 + 0 NULL GK000027.2:9792549-12114416 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20447 CTGAACCATTTTTGTGTTAGGCTCCATTCCTTGCTGTTGTTCAGTCGCTCAGTCATGTCC Gene BVT0102_084784 - 1 EMBV3_12182 GK000012.2:83277102-84265637 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041283 1 XLOC_025090 NonCoding TCONS_00041283 XLOC_025090 NonCoding NonCoding - 12:83564592-83565606 - TSS30784 1014 1 TCONS_00041283_1 55 0.319526627218935 1 0 0 0 0 0 0 0 0 0 0 0 3.61212604307163e-05 0 0 0 0 0 0 0 0 0 0 0 9.04739016762433e-06 0.000429863523526626 0 0 0 0 0 0 XM_005198818.1 ANKLE1 PREDICTED: Bos taurus ankyrin repeat and LEM domain containing 1 (ANKLE1), transcript variant X1, mRNA. 7e-73 279 86.70 0.226824457593688 0 noncoding 0 0 0 0 -0.173170239470036 0.414487340324274 0.0226274080015727 0.622234187141862 TTGAGCAAGCTCTGGGAGACGGTTTAGGACAGGGAAGTCTGGTGTGCTATGGTACATGGGGTCGCAGAGTTGGACATGACTGAGCGACTGAACAACAGCAAGGAATGGAGCCTAACACAAAAATGGTTCAGTAGGGAGTAGTTGGAACCTGGCATCAAATAGGTCTTGTTCTCCTTTTTCAAATTATAGACACTTTTCTTCATTTACACCAGTGGTCCCTAAGATTTTTGGCACCAGGGTCCAGTTTAATGGAAGACAATTTTTCAACAGACTGGGAGGTGGGGGTGGTTTAAGGATGATTCAAGTGCATTAAATTTATTGTACAATTTATTTCTATTATTATTACATCAGTTGCACCTGAGATCATCAGGCATTAGATCCCCAAGGCTAGGGCCCCTGATTTACGCATTAGATTACTCTGTGTCAGTGGTAGAAATTTCAGTTTAAATGACTTAAGAAAGAAGAAGGGACAGTGAAAGATAAAGTGGCATAAGAAAAAAAGGGCTCTATCTGCCCACCAAAGCATCAACACCGATTTTCTACCTTTTCATTTGAAACCTGTAGAAATCTTTTCCTCCTTCACAGTTAAAATATCATTTAGATGAGCTCCAATACTTTGGCCACCTGATGTGAAGAGCCAACACATTGGAAAAGACCCCGATGCTGGGAAAGTTTGAAGGCAAGAGAAGGGGACCACAGAGTAAGAGATGGTTGGATGGCATCACTGACTCAATGGACATGAGTTCGAGCAAGCTCCAGGAGATGGTGAAGGACAGGGAAGCCTGGCATGCTGCAGCCCATGGCATCACAGAATTGGACACCACTTAGTGACTGAACAACAAAAGACGTATTAGCCATGTATGAGCCAAAGTTTCATTTAATTCATATTTTATTTTTGTACCTACCTCCTCTATCCCAGGAACTTTTTAATTATTTTAATTATGAATAAGACAGCAAATCCATGTTCAAACAGGTTTTTTTTTTTTACTAAGGAAGCAAACTACTACTGGATTT TCONS_00037453 TCONS_00037454 . 5' 287492 TCONS_00037453 TCONS_00037454 . 5' 287492 EMBV3_26407 AATGATATCGCTCGGGGCTTTGAGAGAGGACTGGAACCAGAAAAGATCATTGGGGCGACA Gene GeneID:538885|CBX5:XM_002687227:79_cdna Constitutive 1 NULL GeneID:538885 5 GENE CBX5 NULL chromobox homolog 5 (HP1 alpha homolog, Drosophila) EMBV3_28506 TGCTTCTGCTTCTTGTGGCTCTCCTGGTCCTGGGTCATGTGCCAACAGGGAGAAGTGAAT Gene GeneID:100113475|DEFB124:NM_001102360:659_cdna Constitutive 0 NULL GeneID:100113475 13 GENE DEFB124 NULL defensin, beta 124 EMBV3_31674 AACTCAGTCCCCTTCAGAGTGAACTTTTGAATTACTCTGTGTTAGAAATGGAAAGTTGTG Gene BVV0101_009624 + 0 NULL GK000013.2:17953588-17986316 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39899 TGCTACCTTCTTACCCCTTTAACTGTCGTGGTTTGAGTTTGGTTCCTACCCGATGAAGTG Gene BVT0102_038968 + 0 NULL GK000019.2:56321421-56326123 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094666 TCONS_00094674 TCONS_00094675 TCONS_00094668 TCONS_00094667 TCONS_00094669 TCONS_00094671 TCONS_00094672 TCONS_00094670 1 XLOC_057515 Coding TCONS_00094668 XLOC_057515 Coding Coding ACOX1 19:56300062-56325061 j TSS70756 3595 1 TCONS_00094668_2 622 14 0.856748539883191 2.9478083328155e-59 0.000715935367931711 0.00061108068113601 0.000290142779487471 0.000400600858922256 0.000360376849243214 2.87139620235297e-05 0.000675369522697054 0.000216139394065177 0.000282896105616906 0.000107246658028119 1.38139170254104e-05 7.12700544285033e-06 6.7784291682106e-77 4.23124174211429e-09 0.00271563725012579 0.000673807538140504 0.00655546697193474 0.000648666698858695 0.000250389842442103 2.06458971118026e-86 0.00127435323142031 8.93868910107368e-05 0.00167939483677817 0.000278821942384993 0.000472354718593548 0.000239672865681777 0.000144122381243918 4.33381614926773e-07 5.46201100783342e-05 NM_001035289.3 ACOX1 Bos taurus acyl-CoA oxidase 1, palmitoyl (ACOX1), mRNA. 0.0 2661 99.86 0.411404728789986 NM_007292.5 ACOX1 Homo sapiens acyl-CoA oxidase 1, palmitoyl (ACOX1), transcript 0.0 2089 85.24 0.515438108484006 TCONS_00094668_2 sp|Q3SZP5|ACOX1_BOVIN ACOX1_BOVIN Peroxisomal acyl-coenzyme A oxidase 1; 0.0 1218 89.85 0.998392282958199 2 coding 1 1 0 0 -0.241953817851487 0.0934370686777937 -0.0148382489470232 0.788237958868785 GGGTTGCTGAGAGCGTCTCCGTTCCCCCCGCACCACCACCACCACCTGGGCAATTCCTTGACCTTCTTCCGGGGTCCGCTTGTCAAGGGGCTGCTCTGAGGCGCCACTGGCCGAGAACAGGGGACTCGCCCGCCCCGGCGGCGCCCACAGCGGCACAGCCGCCGCCTCACGCCCTGTCCGCGGTCGGTCACGCGCCTTGGGGCCGCGGTGAAGGAGAAGGGGCGGGCCGAGGCGGCCGGGGGGCGGGGACCCGCCTTGTACTGGGGCGGCTCTTAGCGTCGGCCCCGCGCAGGAGCTGCGGATTCCTGCTGTCGCCGCTGCCACCTACACTGCCTCAGCCGCCCGTTACCATGAATCCAGACCTGCAGAAAGAGCGGGCCGGCGCCAGCTTCAACCCGGAGCTGCTCACGAATGTCCTGGACGGCAGCCCCGAGAACACTCGGCGCCGCCGAGAGATCGAGAACCTCATTCTGAACGACCCAGACTTCCAGCATGAGAACTTGAATTTCCTCAGCCGTAGCCAGCGTTACGAGGTGGCTGTTAAGAAGAGTGCCATCATGGTGCAGAAGATGAGGAAGTTTGGCATCGCAGATCCTGCTGAAATCATGTGGTTTAAAAACTTTGTGAATCGAGGGCGGCCTGCGCCTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCTTGCTGCACCAGGCAACCGAGGAACAGCAGGAGCGCTTCTTCATGCCTGCCTGGAACTTGGAGATCATTGGCACTTATGCCCAAACAGAGATGGGTCATGGAACCCATCTTCGAGGCTTGGAAACCACAGCCACTTATGACCCTGAAACCCAGGAGTTCATTCTCAACAGTCCTACTGTGACCTCCATCAAGTGGTGGCCTGGTGGAGTGGCAGGTATTACTGTAGGAGACATTGGCCCCAAGTTTGGCTATGATGAGATGGATAATGGCTACTTGAAGATGGACAACTATCGTATTCCCAGAGAAAACATGCTGATGAAACATGCCCAGGTGAAGCCTGATGGCACATACGTAAAACCCCTGAATAACAAGCTGACCTACGGGACCATGGTGTTCATCAGGTCCTTCCTCGTGGGAGAATCCGCTCGGAGTCTGTCTAAGGCATGCACCATTGCCGTCCGATACAGTGCTGTGAGGCATCAGTCTGAAATCAACCCAGGTGAACCAGAACCACAGATTTTGGATTATCAAACCCAGCAATATAAACTTTTCCCCCTCCTGGCCACTGCCTATGCCTTCCAGTTTGTAGGCGCATACATGAAAGAGACCTATCTTCGGATTAATGAAGACATTGGCCATGGGGACCTGAGTGAGCTGCCTGAGCTTCACGCGCTCACCGCTGGGCTGAAGGCTTTCACGTCCTGGACAACGAACACAGCTATTGAAGCCTGTCGGATGGCTTGTGGCGGACATGGCTATTCTCACTGCAGTGGACTTCCAAATATTTATGTCACTTTTACCCCAACCTGCACCTTCGAGGGGGAAAACACTGTCATGATGCTGCAGACAGCCAGGTTCCTGATGAAAAGTTACGACCAGGTGCACTCAGGCAAGTTGGTGTGTGGCATGGTGTCCTACTTGAATGACCTGCCCAGCCAGCGCATCCAGCCACAGCAGGTGGCTGTGTGGCCAACTATGGTGGATATCAACAGCCCCGACAGCCTGACAGAGGCGTACAAGCTTCGAGCGGCCAGATTAGTAGAAATTGCTGCTAAAAACCTTCAGACTGAAGTGATTCACAGAAAAAGCAAGGAGGTAGCGTGGAACCTAACGTCCATTGACCTTGTTCGGGCAAGTGAGGCACATTGCCACTATGTGGTGGTTAAGCTCTTTACGGAAAAAGTCCTCCAGATTCAAGAGAAGTCCATCCAAGCTGTCCTAAGGCGTTTGTGTCTCTTGTATTCTTTGTATGGAATCAGTCAGAATGCAGGGGATTTTCTTCAGGGGAGCATCATGACAGAGTCTCAGATCACCCAGGTGAATGGGCGCATCAAGGAGCTGCTGACTGCGATTCGCCCTGACGCGGTTGCTCTGGTGGATGCATTTGATTTTCAGGATGTGACACTGGGCTCTGTGCTTGGCCGCTATGATGGCAATGTGTACGAAAACTTGTTTGAATGGGCCAAGAAATCCCCACTGAACAAAACAGAGGTCCATGAGTCTTACAAGCACCTAAAGTCGCTGCAGTCCAAGCTCTGACGTGGCTTGATGATAAGTGCAGTCTGCCCTGAAAGTAGCTGTTCTTACACCTGTCACACAAACTTCGTGGAATCTTGATCAAATTCAGAAAAGCTGTAGAGCAAGTGATAAATTGACCCTTTCCTCTTTTTATAAATGAAAAAAGAAAATAGATTTTGCAAATTAAAGGAGAAAACCAGATGTGTTTTACAAGTGCAATTAACACTGAAAGAGACTATTAAGCATTCAGAAAAAGTTTTAAGAAATGCAGTGCGACTTCCATCTATATTGCTGCTGATCCCAGGAGGCCAGGACTTTTGATAATTAGTAAAATTTAACTACTAAGTAGTTAATTATTTTCACATCTTAATTGCTAATCACTGGATATACAAGTGTTTTTAAGCAGAGGTGTTTTTTTAAGCAGGGTAGAACCCTTCCTAACTTTCTTGCTCATGTCCTAACACAGCTGCCAGGGGTCCCGGCTAGAAAGCAGGAGTGAAGAAGAGAGACTGGGGAAAAGAAACTAATCAGGAAACCTGTATGCCTGGAGTCATAGATTGTCCTCAAGCAGTAGCTGCTGCACCAACTGGAGAGGAACCTTGCCAGGAAACTGATGATTCTACTTGAGGCCAAGAATCTTCTGTTGAGTCTCCTGACTCATAAAGGTTTGCATGGAAAAATGCAGAGATCAGCTAATTGAATATTTATTATTCCATTCCTGGAGGATTAGACCAAGTCACCGTAAATGAATAAAATGTCTTTTCATTTTAAAACACTGGTGGAGTTTTGCTTATAGCTCTCCAAACTCAAATTTTCATTATTATTCCTGTGGTCCATGATAGTAAATATAGAAACATAAGGAAATTTAGCCTTTGTAGACTGCAAATTCCTAGGTTTCAGAGAATTTTTTTTATTTTTTCTTACATATAAGTGAGCCACTGATTATCTCGAGGAAAGTCATGGAACATTGGGAAGGATATTAAGAATTCTGAAGCAAAACAGTTTAACCACATTACTGTCGACTGTTTCACAGATTAGGTAACAATGTGATTCACCTGCATAATATTCCAACTGATGACTGCTTGTAAACATTTCCAATTGCTATGAATTCGAGGAAACTACTTTGGCGCATATAATTTGCTACCTTCTTACCCCTTTAACTGTCGTGGTTTGAGTTTGGTTCCTACCCGATGAAGTGTATTTAGCATGTATTGTTCCGCATGCCTGGCAGGACATGTCAGTGAAGGTGGGAGTACTTGAGGAGGTGCACAGGTCCAAAGACTGAGTCACGGTTGGACAGTGGTGACCCACCAACCTTCGAATAAGCCAAGCCACTAACCCCATCTTCCTTTGTAAAACTGAAGAACCCTTAATAAACTGTAATCAACACGAAAAGT EMBV3_36912 TCCATGTCTCTGTTCACCTGTGCCTCACTCCTTCACGTTGCTGACCAGCTTTCTCGCTTT Gene BVT0101_048846 + 0 NULL GK000013.2:84031206-84212826 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046609 TCONS_00046610 TCONS_00046608 1 XLOC_026752 NonCoding TCONS_00046608 XLOC_026752 NonCoding NonCoding - 13:84120084-84205913 - TSS33788 1153 2 TCONS_00046608_1 51 0.322636600173461 2 0.986589457985739 0 0.000339871452614135 0.000574001435758764 5.04032180342741e-05 1.18444353780925e-15 0 0 1.05381639951507e-47 0.000337464075240011 0 1.98541501252777e-06 0 3.07450161852117e-48 2.51724890240209e-23 4.24949038334308e-06 0 0 0 2.48675813726571e-05 6.20956876702449e-05 0 0 0 0 3.59424910922253e-05 1.78573650137042e-47 4.40367870631046e-05 0 0 0 NM_001101919.1 ATP1B4 Bos taurus ATPase, Na+/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA. 3e-21 107 87.64 0.0763226366001735 0 noncoding 0 0 0 0 -0.253626081725978 0.157800879333778 -0.00628385455732595 0.939979208994196 GGCGGGTGCTGGCCGCTGTGCTGTGTGGGAGGCCCCACCTGACAGCATGGGGCCTCCCCAGGACAGCAGACAGCCTGCCCTGGGCAGTTGGAGCTCCTGCAGACCCTGCAGGGGCCCTGAGAGGGAAGGGCCAGGCCAGAGGGGGGTGAGTGCCCAGGCAGAGCCAGGGGGCACGGGACCCAAGTGGGCCTTTGTTGTCTGAGGGGGAGTGGGCGAGCCAGCGGTGAGTGTGACCCAGGGAAGTGGCCCTGCTGATGGGAGACTGAATCCACCTCAGAGGTACAAGCCTTCCGGATGATCCTAGAGACAGGATGTGAGACAAGAGTCCTGGTAAAAGACGGAAGTTGAATGTTGGCATGTGGCCATTCCTCATGGAACCCGATTTGAGAAGCGGACCGTCAGCAGGAACTCTGGAGGCTGCTCGGACCTGTGCACCTCCCTCCATGTCTCTGTTCACCTGTGCCTCACTCCTTCACGTTGCTGACCAGCTTTCTCGCTTTACTCTGTGAGCACGAGAAGGCTGGGCCTAACCTTGGCAGGTTTACTTTCCTCGTGTGATGTGACTGGCTATGTCTGAACCCTAATTCCAGACCCCGAGAGAGAGAATCTGATCAGAAAAAGTGTTTCCCTTGGTCAAGAAGAGGACCCTGGGGGAGGGAACCTCCCAGAGAAAAGAGGTGTCATCTAGAAACATCCCTTCAGTATGAGTCCTTATTTATAGTATTGTGTGTATGCAGGCTCAGTCAGTCAATCGTGTCTGACTCTTTGTGACCCCATGGACTATAGCCCGCCACGCTCCTCTGTCCAACGGGATTTTCCAGATGAGAATAATTTCTAGTGTTATCCCCATTCTATAGATGAGGAAATTGAGACCCTGCTTTCCTCACCAAGGTCACATAGCCACTCCTAACTTTTCTTCTAGAATGAAGATTGTTGTGAGGAAATAATTTTACTCTGAAATAGAGATCTGTGCTATTCAAGTTGCAGCTGATTTTAAGGAAGAGATTTATCTTTTAATTGGAACATATTGTTGAGCAATTTTTTTTTACTTTGTAATTTTGTTAAAAGGAGACACACTTTCTCAAAATAAAGTGAGAGTAAATGAGAATAAAATGTTCATAGCAAAGAGAATGATTCCTCAAATAATCTGGAT TCONS_00046605 s 5' 87371 TCONS_00046605 s 5' 88183 EMBV3_39136 TTCCTAAAGGATGAGACCGGAGACTTCACCGCCTCCTTCCTCATGTGCGGCTCTTTCGTC Gene GeneID:618274|SLC16A11:XM_002695781:286_cdna Constitutive 0 NULL GeneID:618274 19 GENE SLC16A11 NULL solute carrier family 16, member 11 (monocarboxylic acid transporter 11) EMBV3_13574 CTTCTGTGACCACCAGCCTCTCTTAAGGCTCTCCTGCTCTGACACCTGGCACATCCAGCT Gene GeneID:522171|LOC522171:XM_002691573:75_cdna Constitutive 0 NULL GeneID:522171 11 GENE LOC522171 NULL similar to Olfactory receptor 1K1 EMBV3_31040 TTGGTTCTGCCATACGTTGCCTCCAACTATATCATAGCAGTGAGCCTTCTGACGCTGTCC Gene GeneID:519345|SLC17A3:NM_001075787:95_cdna Constitutive 0 NULL GeneID:519345 23 GENE SLC17A3 MGC140514 solute carrier family 17 (sodium phosphate), member 3 EMBV3_38877 GAGAGTTGGAAATAAGACCTGGAGTCTACGCTAGGAGACAGATATTTTGGTATGCCTTGG Gene GeneID:540816|ZNF189:NM_001099113:15_cdna UTR3_Alt 1 NULL GeneID:540816 8 GENE ZNF189 MGC157047 zinc finger protein 189 EMBV3_06951 GGCTTATAGCATGGCAGCAATGACCTTCAATCCTCCCGTTGAATCTTCAAACTCCAAAAG Gene GeneID:510425|NOC3L:NM_001098008:105_cdna Constitutive 0 NULL GeneID:510425 26 GENE NOC3L MGC148508 nucleolar complex associated 3 homolog (S. cerevisiae) EMBV3_23408 AACACCAAAAAGGAAGTTGAGAGAATCCCACTCTCTGCTATCCAAGCCACACGAACGCCC Gene GeneID:506990|PPDPF:NM_001075294:907_cdna Constitutive 1 NULL GeneID:506990 13 GENE PPDPF C13H20orf149 C20orf149 pancreatic progenitor cell differentiation and proliferation factor EMBV3_29735 ATTACGTCTTCTACCTGGCCGTGGGGAACTACCGGCTCAAGGAATATGAAAAGGCCCTGA Gene GeneID:615565|FIS1:NM_001034784:299_cdna Constitutive 2 NULL GeneID:615565 25 GENE FIS1 MGC127603 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) EMBV3_27698 AGTCCCCCCAGAATGGGTCCCTATTATCCAGCAGGACATTCAGAGCCAGCGGAAAGTGAA Gene GeneID:508605|BAT3:NM_001075366:78_cdna Constitutive 1 NULL GeneID:508605 23 GENE BAT3 NULL HLA-B associated transcript 3 EMBV3_16686 ACTACTGCGCCCACTACCTCATCCGGTTTCTCAAGTGCAAGCGCGACAGCTTCCCCAACT Gene GeneID:338065|NDUFB7:NM_176660:10_cdna Constitutive 0 NULL GeneID:338065 7 GENE NDUFB7 NULL NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa EMBV3_18082 ACAGCAGATACCAGGCGGTGGATGGCTGAGAAAGACAATTCCAGGGAGAACTTGGTGGTT Gene GeneID:511319|TTLL12:NM_001075510:159_cdna Constitutive 0 NULL GeneID:511319 5 GENE TTLL12 MGC139413 tubulin tyrosine ligase-like family, member 12 EMBV3_24818 CATCCACATTGATGAGCAGAGCGGGAAGGAGAAGTACAAGCTCCTGGTGGAGGGGGATAA Gene GeneID:540308|POLR3A:NM_001083750:389_cdna UTR3_Alt 2 NULL GeneID:540308 28 GENE POLR3A MGC137470 polymerase (RNA) III (DNA directed) polypeptide A, 155kDa EMBV3_33577 CTTTGCACAGACCACTCCCTCTGCCAGACACCCTAACTCTTGCTTACTCCCTAAAGCCCT Gene GeneID:506438|CYP46A1:NM_001076810:184_cdna Constitutive 0 NULL GeneID:506438 21 GENE CYP46A1 MGC142869 cytochrome P450, family 46, subfamily A, polypeptide 1 EMBV3_03036 GAAGTTCCAGATTCTTCCATTTTGAAAAAGAATGTACCTGAAGCATGGGAGTCCAGTTAA Variant GeneID:534370|FAM45A:NM_001076902:20_cdna 292^371 2 EMBV3_07928 GeneID:534370 26 GENE FAM45A MGC142581 family with sequence similarity 45, member A EMBV3_19260 ATGTAAACAGATGAAACAGCGCTTTGAAAGGAAGAAGACACCCGTTATCAGAGAAAAAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12852 GCTCTCGGGGACCCCCCATGATGCCAGGAAGAACACCGCCATCATTAAACATTATTTTCT Gene BVT0102_324924 + 0 NULL GK000019.2:55227929-55328979 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00097849 TCONS_00097845 TCONS_00097848 TCONS_00097846 TCONS_00097847 1 XLOC_058352 Coding TCONS_00097849 XLOC_058352 Coding Coding SEC14L1 19:55326791-55376388 j TSS72407 4148 1 TCONS_00097849_2 352 11 0.91658601500121 0.00487970560370011 0.00487554291340708 0.00181345564784055 0.00168776821017681 0.00382585882067165 0.000118970470100625 0.0027179149083149 8.87389288805354e-08 0.00440009633856282 0.00218414056374342 0.000343230836138668 0.000253908069858451 0.000475829935644351 0.00280146428457161 0.000713880922390134 0.00673362842106995 0.00700576898959215 0.00228246522130734 0.0031115477131848 2.40197789317182e-90 0.00163015082466206 0.00241839555746097 0.00292850910099765 0.0018762002581674 0.003898793409076 0.0018001768608107 0.00267135652305681 0.000551560348311251 0.000119511733757358 0.000919300313028959 NM_001101975.2 SEC14L1 Bos taurus SEC14-like 1 (S. cerevisiae) (SEC14L1), mRNA. 0.0 2003 99.47 0.270973963355834 NM_001039573.2 SEC14L1 Homo sapiens SEC14-like 1 (S. cerevisiae) (SEC14L1), transcript 0.0 1267 86.84 0.251928640308582 TCONS_00097849_2 sp|Q92503|S14L1_HUMAN S14L1_HUMAN SEC14-like protein 1; 0.0 624 89.09 0.957386363636364 2 coding 1 0 1 0 -0.339673548011651 0.0963794229546693 -0.101710777880325 0.224279079054421 AGTGGAACGGCGACGGCGCCACGGAGCCGCCGGCATGAGCGCCCTCGGTCGCCCCGCGTCCCAGGCCCGGCTTTTCTGACGAGAGGTGTGAAAGGATTGCTGTTTTATTGCAATCATGGTGCAAAAATACCAGTCACCAGTGAGGGTGTATAAACACCCCTTTGAACTAATTATGGCTGCCTATGAAAGGAGGTTCCCTACGTGTCCTTTGATTCCAATGTTTGTGGACAGTGACACTGTGAATGAATTCAGGAGTGAAGATGGGGCTATTCACGTTATAGAAAGGCGCTGCAAACTGGATATAGATGCTCCTCGACTGCTGAAAAAGATTGCAGGAGTTGATTACGTTTATTTTATCCAGAAAAACTCACTGAACTCTCGGGAACGTACTTTGCACATTGAGGCCCATAATGAAACGTTTTCTAACCGGGTCATCATTAACGAGCTCTGCTGCTACAGCGTTCACCCTGAAAATGAAGACTGGACCTGTTTTGAACAGTCAGCAAGTTTAGATATTAAATCTTTCTTTGGTTTTGAAAGTACAGTAGAAAAAATTGCAATGAAACAATATACCAGCAACATTAAAAAAGGCAAGGAAATCATCGAGTATTACCTTCGTCAGTTAGAGGAAGAAGGCATCACATTTGTGCCCCGCTGGACTCCACCTGCCGCCGCCCCCTCTTTGGAGACGTCCTTGTCCTGCAAGAAACCAGCAGCGTCACTGACTGTCGTCGTGCCTGACCCCACGCTCAAGGAAGGGCTGAGCGGCGAGCCCCTCAGCACCCCGAGTGGGGCAGCCGAGCCCACCGCAGGGACCCCGGACGACAAACTAGATGCAGACTACATCAAGAGATACCTGGGCGACCTGACTCCACTGCAGGAGAGCTGCTTGATCCGGCTTCGCCAGTGGCTCCAGGAGACCCACAAGGGCAAGATCCCGAAAGATGAGCATATTCTCCGGTTCTTACGCGCCCGGGACTTCAACATCGACAAGGCCAGAGAGACCATGTGTCAGTCTCTGACTTGGCGCAAGCAACACCAGGTGGACTACATCCTCGATACCTGGCACCCGCCCCAGGTCCTGCAGGACTACTACGCGGGCGGCTGGCACCATCACGACAAAGATTCTCATTCAGATCGTGGACGCCTCATCGGTGATCACGTGGGATTTTGACGTGTGCAAAGGGGACATTGTCTTTAACATCTATCACTCCAAGCGGTCACCACAGCCACCCAAGAAGGACTCCCTGGGGGCGCACAGCATCACTTCCCCAGGAGGGAACAACGTACAGCTGATAGACAGAGTCTGGCAGCTGGGCCGGGACTACAGCATGGTGGAGTCGCCTCTGATCTGCAAAGAAGGGGAGAGCGTGCAGGGCTCCCACGTGACTCGGTGGCCGGGCTTCTACATCCTGCAGTGGAAGTTCCACAGCACGCCGGCCTGCGCCGCCACCAACCTGCCCCGTGTGGACGATGTGCTGGCCTCCCTGCAGGTTTCCTCCCACAAGTGCAAGGTGATGTACTACACCGAGGTGATCGGCTCCGAGGACTTCAGAGGCTCCATGACCAGCCTGGAGTCCAGCCACAGCGGGTTCTCGCAGCTCAGTGCCGCCACCACCTCGTCCAGCCAGTCCCACTCCAGCTCCATGATCTCCAGGTAGTGCCCAGTGCTCGGAGGGGACGGCCCACCACCTCGGACCGCCGCCCACCCGCCGCCGAGCGGCCACGTTGTGTGAACTGCTCTGGCCCTCTAGGTAGCAGATAGCTCTGCAGATGGTAAATGTAGTCACTGACCCCGAAGCTATCTCGACAGGTAGTTGTAACTCTCACTCCATAGCCATAGATTTTGTATACAGTGTGCACAAAATCCAATCAGAGCACAAGGGCTCTCTTCAAAGAAAAGTAGTTTATATACCAGTTAAGAGGTTGACTTTGTCTCAAACCTGGATGCAAAAAAAAATGATTCCAGCCACCTCCTCACTGTCCCTCAGTGGATGAAGCCCCTCCTCCACCCGTCCGAGGTGACCCGCCTTCCTCCGTGGAGCAGAAGCTGCCAACTGGTCCCCTGCCCACAGCTGGCCCCCGCCTCCTCCCTGCCGGTGGTCGACGCGCTCCGAGGGCGCTGACCGCCCTCTGGGTTCCTGTTCCTCTGAGTAGTCGCCGCCTAACTGGAAGGACTCAGGGAGCCTGTGGGTGTCCCGACCCAGCTCTGGGACCAAACAGACCCGCTGTTGTAAAGTGGGGGCTGGGGGCTCTCGGGGACCCCCCATGATGCCAGGAAGAACACCGCCATCATTAAACATTATTTTCTCTCTCCTCCCTTCAAACCTTTTGGTACTTTGAGAGCAGACTTTCTCTGTCCTGAACGTGGGCCAAGGGCCGCCTCCTCCTCTCCTCCTGGTGTGCCTCTCTTCCTTCCTGCATGGCTCACTTCTGAGCTCCTCCACTGGCCTCCCTGGGCCCCTCACAGCCGGGTCGCAACAGCGCCCAGGTGGTCCTTCCTGCTGCTGGAGGTGTTTCAGGGGCAGCGAGGCCCACTCGCCATTTTGGAACGTCCCACGTTCACTGTAGCTGACCAGCGTACTCCCCACGTGGCTGTGCCAGGACCGCCTGTGGCCTGGGCAGCCCGGCTCCTTTGTGAAGGAAGTTGTGGATGTGTGTACACGCAAGCATGTGTGTCCAGGGGTGGGTAGAAACATAGTTCAAGTAAGAGAGGGTTCGATGTCCTCGAAGCAGATCAGATGATGAAGTTGGTTTGCTTTTGATTTTTTCTTTTTGATTCCGATCGCCAAGCCTGGTCTGCCTTTTTATTGGCCCATCATTTTCTCAGCTTTTTATGGGAAAAGCAGGTTTTCTGTGAGTCTGTCCAGTTGCTGCTTTGGGTCAGTCTCCACGATGAATGAAGGCATGTCACGTGATGGTGTGTGTGGCAGAGGCTGTGCTTTTTAAGAATCCGGGCCAGGAGCCAGGCGCCATCTTGAGCTTGAAGAAATCCCGGCCTCAGAAATCCTGAGTTGCCTTGTTATGGATCTGCCCTGGAGGCGTTAGGTGGAGCGCTGTGAGGACCAGGGTGTGCCAGGGGCGGGGTCAGGAGGGCTGGGAGGGGCGGAGCTCCGTGGGTGTCCTCTGTGGGTGTGGCATGCTGAGACCCTCCTGCCTTTCCCTGGGCTGCGGGCCTGTGTGGAGCACAGCCGACCCTTGGCACCTAGAGGCTTGTTTCCAGAAAGCACAGTAGGGCTAGTTAGTGGATCCACACTGCTTGCTGTCAGTGCTTCCTGTTTCCAGATTCTAAGGACCTGAAGATGGTCCCCTCTCTCTTTCTCTCTCTTTCTCTGTCTCTCTGTGTCTCAGATGGCGATTTTGCTGACAGCTGCCAAGAAAACGCTTCACTCGACAGTCCACCTCAGCCCAGGGATGTTTGTAGAACTATTTGAATTGCAGCCACCCCCTCCCCCAGGCTGAAGACCAGTTCTTTTTAAGTTGACTCAGAAGTGGCACTATTTTATCCCCAGAGTTGACTGTATCTTTAAGAGTTCAAAGCACATCCCTGCACACACCTTCCAGGGCTCCCTCCGCTCTCCTGGGAGGGGCTGTGGGGCAGGTGGGCGGGGTCCCGCGCTGGGCCCGCCCTACTCAGCGCCCTGCGCCCTGTTTCAGATGCTGCTGTCGTGCCACCTTTTTCCAGCACTAACGATCCTTCTGGTTTCCCTTCTATTACTAGTGTCTTAATTCACCTTCTTTCCTAATTACATTATTTACGTATCAAATTCTGTAAATGTTTTGTAAACATATTACCTCACTCTTGGTAATACAATACTGATAGTCTTTAAAAGATTTTTTTATTATTGTCAATAATAAATGTGAACTGTTTAAAAAAAAGTCTTTTTCTTATTGTGAATGGCAACCTCCTTTGAAGAGTATGACGTTCTTAGGAGACTATAGATTAGAGGAAGGGGAGATGCTGGAGCCAGAAGCTGGTGCGGATCGAGGCTCAGTACGTACAGCTCAGTGGTCTCCCCCCCGCCCCCGCCCCCCAACAGAGGACAGGCTGCACCTTTCCTCGGACTCCAGGAAGTCAAACAGGACTCAGGCTGGACACCTGATACCATGTTTCTCTTTTACATATATACTAAATTAAAACTGTTGAC EMBV3_08794 AAGGCCTGGCCGTTACTTTCGTGTCTGACGAGAACGATGCCAAAATCCTCAATGATGTCC Gene GeneID:614215|DDX39:NM_001034752:43_cdna Constitutive 0 NULL GeneID:614215 7 GENE DDX39 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 EMBV3_22284 CCCTTCCAAAGCACATACTCACTGAATGTTTACAGACTGGCTGTCCTGGCAGGGCTTTCA Gene GeneID:531476|JDP2:XM_002691011:339_cdna Constitutive 0 NULL GeneID:531476 10 GENE JDP2 JUNDM2 Jun dimerization protein 2 EMBV3_27223 GACCTTGAGCAGGTCACTTCCAGTTTTAAAGGTCCAGGAGTTTGCTTGTTTGCTTTTGTG Gene BVV0102_103133 + 0 NULL GK000029.2:18522889-18684327 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34025 TTCAAGCTGGTGCAGGAGAAGAACGCCATGGTGCGCTACGAGTCAGAGCTGATGATCTTT Gene GeneID:532244|MICAL3:XM_002687919:124_cdna Constitutive 0 NULL GeneID:532244 5 GENE MICAL3 NULL microtubule associated monoxygenase, calponin and LIM domain containing 3 EMBV3_14185 TTCTCCTTCTAGGTCCCCACTGCGGCTGCCTGATGTCTGATTAAAAAGGCCTAGACATGA Gene BVT0102_333655 - 1 EMBV3_10842 GK000004.2:98866571-99016784 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30221 GGGAGCCTCATTCCAGCATTCCTCTCAGAAAGAGAGAGACGTATTTTCAAGCAGTGTGTG Gene GeneID:768241|PDRG1:NM_001078115:1384_cdna Constitutive 1 NULL GeneID:768241 13 GENE PDRG1 MGC139440 p53 and DNA-damage regulated 1 EMBV3_04866 GTTTATGGAGGGCTATCTGGTCTCTAGTGCCTTAGCTGTGAGAGGGCCAGTGAAGCCTTT Gene GeneID:522986|QSOX1:NM_001102074:151_cdna Constitutive 0 NULL GeneID:522986 16 GENE QSOX1 MGC152578 quiescin Q6 sulfhydryl oxidase 1 EMBV3_16031 CCAGCCCTTCCACTTCACACGGGAAATCTGAAGCTCTCGGAAGAGAAATGACTCGTACAA Gene BVT0102_130911 + 0 NULL GK000001.2:79775463-80188690 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001267 TCONS_00001266 1 XLOC_000297 NonCoding TCONS_00001266 XLOC_000297 NonCoding NonCoding LOC100847122 1:79783101-79786112 = TSS632 2721 2 TCONS_00001266_1 122 0.0911429621462698 2 0.0966777408637873 0 0 0 0 0 2.05076511562461e-22 0 0 5.25926417311958e-99 0 0 1.0201760368148e-96 1.59321775001243e-53 0 9.13240233177209e-06 0.000687549006846458 6.10154970283815e-06 0.000500723160766115 0 3.6488937165476e-05 2.23133431123686e-06 0.000151444661188006 0.000131934076032097 9.8579208360696e-05 0 0 0 3.68490417367079e-127 2.37652163827353e-84 1.98861475304911e-05 XR_138614.2 LOC100847122 PREDICTED: Bos taurus uncharacterized LOC100847122 (LOC100847122), 0.0 1599 100.00 0.325248070562293 NR_036497.1 LPP-AS2 Homo sapiens LPP antisense RNA 2 (LPP-AS2), non-coding RNA. 3e-126 457 94.59 0.108048511576626 0 noncoding ACCGCGCCCCGCGCCCCGGGCCGCGCAGCCAGCCCTTACCTTGCAGCGACCAGCTCTCCCCCGCTCGCTAAAGCTACTTATCCCGGGAAAGCTCGCGCGGGGCCCGGGAGCGAACCCACAGACAAAAAGTGAAACTTCGGCAAGGCTGGAGCGGCTGCTGGTTGGTGCCTTTCCCCCTCCTTCCTCCCACCGTCCCCACCCCCTCCCCTCGGTCTCCCGTGCGGTGCCCTGAGAGCTGGAGGCTGACGTCAGGACGGGCCTGAATTCCTGACTTTGCCTGCACGCATTTGTCCATGGCGCCAGACTAGGGGGTTGAGTCCGGGTAGACGAGCTCAGCCGTGGAATCCCCCTGCGAGATCTTGCTCGTGAGCCCCGCCCCGGATTCCCAGCAAGGTTCAAACGTACTGGATGTCGGAACTGGCCCCGACCAACTTCCAGCCCTTCCACTTCACACGGGAAATCTGAAGCTCTCGGAAGAGAAACGACTCGTACAAGGTCATGCCCGCCACAGATCCCGGCGCGGGAGCCAGATGCTCAGTCTCCCAGCTATGTTCCTGTCTGCAGGCAGGGGCCCGACTCCCTCCTTCCCGCGGACCAGTTAGCCCGGCTGGATGTCAGAGGGCAACGCGGACCACCCTGGGAAGAGATTTGGAGCTTCCCCGGGCCCCGTACGCGGTCAGTTCCTGGAAGGTTCTGATTGCCAATGAGCACTGCATAGCCATGCTGATCAGTTTCTTCAAGGCAACTCCTTCCATCCAGTGCTCAAATAAACGAAGCCCTGGAATTTACTTAACAGCCCTATCCAGAAACCCAGACTTCGTGCTTATAGCTTCAAAAAAAATCTACGAACTGGGTGAATTAGTTTGAATAAAGGCAAGACTGTTCTTGGAAGGTTTGTGTAGGACTTTTTGCTCTGATATTTGTAAATGTGAGCACCATGTGAGGGGCCTATCCTGTGCATCAGCCATTGCCTGCAAGGCACGCCGAGGCTGGAGACTCGTTTCCTTGTACTTCTGTCCTGCTTCCTGATGTCTAAACTAATCATTCCTCACCCCAGCGCATCGTAAAAGCACATTCTCCCAGGTTTATAAGGTCTTCATAAAACAAATTGTAGTCCATCGTTGACATTTGAGGTAAAAAGTCAGGCAAAATAACTTAACCAACACAAAAACAGCAAGCAACTTGAACCCACCTCCGGTGTCTAGGTCACCTGACTGATCCCATGATTTTTTCCACCCAAGGAGGAGGCCCTGATCTCCTAATTCATATTAATACATGTTGAGAGTACACCATGAGTTACTAATTCGTGAAATCTCCAAAAGTTGGTTCTTTTGGGATTTGGTGTGACTTTTTTTTTTTTTAACCAAGAATTAAACAAATGCAGAAACACATATTTTTGCACTTAACCATTTATTAAGCATATTCTTTGTGCAAAGTCTTTGACTTCACACATTTCTGCTTCCAAATTAATCTCTCTTGCTCTCAGTTTCTCATCTATTCATACAAAAATATGAAAATAGAGAAGTTCAGTAATGAAATATTTTTCTTTGCAACTGGTATAGTTTGAAATAGGAAATGTGAGCTCCTAAAGACATTTTGTTCTGGGGCTTAAAAAGATTATTCTCTTACACCACAATTCACTTATTCTATCCTCAGTATTTCAGCAAACGACATTCTAAGTGGTACTGTATAATATGAAAAATTCCTGGTATCACGCAAAGTAAGAATGGATTCAACCATTCCCCATCGGATATAACGGGACTTGACCAGCATTTTTTTTTTCCTTCCCCAGTAACCCACTTATAAAGAATAATAGGGTTCTAATGAGGATTAATAAGATTTAATAAGGTATAATTAGAGCCATTCATTTCCTTCATCATACACATTGTAAGAGTGCTGTGTTAGATCCAGAAATGCTCCTAATTATGTTGAAACTGTTGTATGAGTGTGTTGGGGAAGATCACTGTGTCACCCCTCCTGAAATATTTATGAAATGCTCAGGTGGGCCTGATGTTAGCACAAGTATTATATAAAGTTAATCACAAAAGATAATTTCTACTCAGGAGGCACTCACCAGGAGTGTAAGAGGCAAAGTCATAAATTGGATGCTTGGCGAACTGCATGCAGTCTTGTCATCAGTGCAAACTCAAATCAAAAGCCTCATTTTCGTGTGCTGATCTGATTTCTTTTGTATTCACACTTCTCTCAACAACCCTATTAAAACCTGCTGCGTGCGGGGACTTGGGAAAGAAGGGAAGGCTGTGTAAAGCTACAGACACAATTCTGGAGAAATACAGGTTTACGAATTCAGAGACTAAAAGAAGCACAGAATTTCAGATGGGGCGGAGGATGAGTGACCAGAGGATTGTACACTGGTGGCCTGAAGCCCTACAGATGCAGTCTCGTAGGTCCAGTGATGGCACAAAAGACTTTGAACAAGGCTAGGCTGTGGTGCCCCCATTTCCTTGCATCCAGGACCATCCCTTTCCCAGAGGCCATTGTGTAGCTCATGCCAGTCCTTTCTCTGACCTTACATATGCCTGGCAATATTCTAAGGATTTTTCATCCATATTTCATTTAACCCTCACAGAACCCTTCTGAGCTTGGCAGCAGTATTTTCTCTAGCCCAGGAAGGTGAAGTAGCCTGCTCTTAACACAGAGCAAGTACATGGTAAGCTGAAATGCCCCTCTGAGCCCAGGCAGCCTGACTACTCACCCACT EMBV3_37290 AGACATCTGAGAACTGTTTGTGCCAGGCTTGTGGGTTGTATCGCCACTGTGAATACTCAG Gene GeneID:511627|CCDC82:NM_001046094:8_cdna Constitutive 0 NULL GeneID:511627 15 GENE CCDC82 MGC137636 coiled-coil domain containing 82 EMBV3_28998 CACAGAAGAGGGCGCACTTTGCCTTGAGAATTAGAGAGGGCTTCACAGCAGGAAAGACAC Gene GeneID:281118|DSPP:NM_174038:7_cdna UTR3_Alt 1 NULL GeneID:281118 6 GENE DSPP DMP1 dentin sialophosphoprotein EMBV3_15025 AGAGACAGACCCAGAGTCATCTTTGTTGGGTGGGGAAAGTTGTGCTCTCCTTCAGACTTC Gene GeneID:100295820|LOC100295820:XM_002689283:104_cdna Constitutive 1 NULL GeneID:100295820 7 GENE LOC100295820 NULL similar to esophagus cancer-related gene-2 EMBV3_39510 CTGTCTGCAGGAAGGAGGATCTTAGGAAGGCCACCAGGAGGAGAGAAGCATTTCCTTTGA Gene BVV0102_020433 + 0 NULL GK000003.2:93020673-93047712 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00170704 TCONS_00170707 TCONS_00170714 TCONS_00170712 TCONS_00170705 TCONS_00170709 TCONS_00170715 TCONS_00170713 TCONS_00170710 TCONS_00170708 1 XLOC_103641 Coding TCONS_00170712 XLOC_103641 Coding Coding TMEM48 3:92965488-93022883 j TSS127488 4553 1 TCONS_00170712_2 660 18 0.920984771927379 0.000652335617022832 0.000337491033128596 0.000294506350599195 0.00011939729222555 0.000284734558688515 6.77271187971901e-05 0.000614028267366917 0.000109811408813605 2.64969621510375e-08 0.000454207061099612 8.31464012383106e-29 0.000150647735487205 1.11471762129598e-06 8.74732871213563e-05 9.59966131982758e-06 0.00620346992394903 0.00470105509415189 0.00704002700012711 0.000813495619332141 0.00154551658260787 0.000656593847630236 0.00253030639822431 0.00535357090394261 0.00362553868452537 1.12110799013318e-07 0.00203558729192668 2.90422676429174e-05 0.000744419177349676 0.000442647224139021 0.00144835925542475 XM_003585901.2 NDC1 PREDICTED: Bos taurus NDC1 transmembrane nucleoporin (NDC1), 0.0 8172 100.00 0.994948385679772 NM_018087.4 NDC1 Homo sapiens NDC1 transmembrane nucleoporin (NDC1), transcript 0.0 4765 83.30 0.970129584889084 TCONS_00170712_2 sp|Q9BTX1|NDC1_HUMAN NDC1_HUMAN Nucleoporin NDC1; 0.0 1196 91.03 0.995454545454545 1 coding 1 1 1 1 -0.180510371352339 0.441364375868032 0.00287276129463419 0.953391496351044 CGGGAAGCCCATGTCTTATGAGGTGTTGGGCTGGAGGATAGTTACAAGCATTGTCTGGTCAGTGCTGCTGCTGCCCATCTGTACCACAGTATTTGTAATCTTCAGCAGCATTGATTTATTTCATCCTATACAGTGGCTGTCTGCTTCTTTCTATGATCTGTATAATTCCTACATTATCTTTTACCTTCTGCTGCTGTCAGTGGTAATTGTAATAATAAGTATTTTCAATGTGGAGTTCTATACAGTTGTTCCTTCCATTCCCTGCTCAAGACTGGCACTGATAGGAAAGATCCTTCATCCGCAGCAGCTCATGCACTCCTTTATGCACGCTGCAATGGGAATGTTGATGGCTTGGTGTGCTACAGTGATGACCAAGGGCCAGTACAGCTTCCTTGTGGTTCCCTGCACTGGTACCGAGAGCTTAGATAGCCCTGCTGTACCAACCTGCTTAAATGAGTATCACCTTTTCTTCCTACTGGCTGGAGCATTTATGGGCTATAGCTATAGCCTCCTATATTTTATTAACAATATGAACTACCTTCCATTTCCCATCATACAGCAATACAAGTTCTTACGCTTCAGGAGGTCTCTGCTCTTGCTAGTTAAGCATAGTTGTGTGGAATCACTGTTCCTGCTTAGAAATTTCTGCATTGTATATTATTTTCTTGGTCATATTCCCAAAGCTTGGATTAGCACTGCCATGGACCTTCGGATAGATGAGCGGTTTCATAGGCCTCTTGACACTGTGAGGGGCCTCTTGAATCTCTCGTTGCTCTACCACGTCTGGCTGTGTGGTGTCTTTGTCCTGATGACTTGGTACGTCTCATGGCTACTCTTCAAAATCTGTGCCACAGAGGCTCATCTGTTCCCTGTTCAACCACCATTTTCAGAAGATTCAGATGAATGCCTCCCGAAAGTTTTAAACAGCAATCCTCCCCTCATCATAAAGTATTTGGCCCTGCAGGACCTGATGTTGCTTTCTCAATATTCTCCTTCACGAAGACAAGAAGTGTTTAGCCTTAGCCAACCAGGTGGACATCCCCACAATTGGACAGCTATTTCAAGAGAGTGTTTGAATCTTTTAAATGATATGACTCAGAAACTTGTGCTCTACCAAGAAGCTGCTGCTACCAATGGGAGAGTGATGTCTTCATCGTACCCAGTGGAAGCTAAGAAACTGAATTCTCCAGAAGAAACTGCGTTTCAGACCCCCAAATCTAGCCAGATGCCTCGGCCTTCAATGCCATCATTAATTAAGACATCACTGTTCTCCTCAAAATTATCTACTCCTGATGTTGCAAGTCCCCTGGGCACTCCATTTGGCTCTAGTGTAGTGAACCGGATGGCTGGAATTTTTGATGTAAACACAAGCTATGGGTCACCTCAGAGTCCTCAGCTCACAAGAAGAGGGCCAAGATTATGGACTTCAGCTTCTGATCAGCAAATGACTGAATTTTCTAATCCTTCTCCATCTACCTCTATTAGTGCTGAGGGTAAGACAGTGAGACAGCCCAACGTGATTTATTCATGGATTCAGAATAAACGTGAACAGGTTAAGAATTTCTTATCAAAACGAGTGCTGATAATGTATTTTTTCAGTAAGCACCCAGAGGCCTCCATTCAGGCTGTGTTTTCAGATGCCCAAATGCATATTTGGGCATTAGAAGGTTTGTCTCACTTAGTAGCAGCATCGTTTACAGAAGATAGATTTGGCGTAGTCCAGACCACACTACCAGCTATTCTTAATACTTTGTTGACGCTGCAAGAGTCAGTTGACAAGTATTTCAAGCTTCCTCATGCTTCCAGTAAGCCACCTCGGATTTCAGGAAGCCTGGTGGACACTTCCTATAAAACATTAAGATTTGCATTTAGAGCATCACTGAAAACAGCCATCTATAGGATAACTACCACATTTGGTGAACATCTGAATGCTGTGCCAGCATCTGCAGAACATCAGAAGAGACTTCAGCAGTTCTTGGAGTTCAAAGAATAGTTAAGTAATATAAACTGTGTTCATTACACTGCTGATACAACTACAGATGGGACAGTAAATGTTCAGCATTCTTGGATCAGAAGAAAATGGACTAATTAGATGCTTCCTTTGTCGTGGTGGTTGCTTTGAAAACTATACTTTAATGGGAGAAATCATGGAAAGAAATTCTCAACAGAAAAACCGAAAACTGCCTTTTCTGTACTGATTGCTTTTTGTGTGTGTGGCATAATAAAATCTTTATTCAATTTTACAGAAGCCTCTATGGCAGTAGAAATGTTTGTAGCTTATGCAGCTTAATAAGAAGAACTAGAAAATGTTTAGAATTTTCTTTTGAGAGGAGTAGAGGCAGTTCAGAAGGTAAAACAGGCCAACTTGATCTAGCCTTCCTTCCTGATCGGTCTGAGAGTTTAGCTCTCTGTAAACTCAAAATGCGTAAACTTTTTTGGAGTAGTTTCTGTTTACTAAAGGATAAAAAGAGTAACAGTGGAGAAAAAGTCACAGAAAATGCTGTCTAGAGGACATATTTTGTTAATCTGTTAGGTTGTGTTTTTGTTTTTGGAGACAAATTAAATTTGCATGATTGTCAAAAAGAAGTCTCAATTTACAGATGCTAACTCTATGTAAAGGAATGTGGAAAAATTCAGCTCTTAAGTTACAAGATGAAACATTCACATTTGGTTTTCAAAAGATAATTGACCGACATCTATGAATTTATTTTGTATCATGCTAGTAAACAATGTGTATGGGTATTTTCTCAGCTAGTTTTTGCTTTCTTTTTCTGGAACAAAACATTAAGTGATTGCCAGGTTTTTCAAGTGAGAGAAAAAGTTTTGCAAGAAAACCAGGAAACTTTCCTTTTTTTTTTCCCCCACTCTCCTCATCTTCATTAGATCAAATTATTTTGTAAAGCTTATTGTCCTCACAGGGGAGCAACCTTTGCTTTGTTAACTGGCTGGTTAAAATATATTAGGAACATCTTTACACCCAGAAACAACTTAGTCATCAGGTAGCAAGTGAAACCAAAATGTCAGAGGGATTAGTGTACTTAGGAGTATGTTGTATGTCCTGAAAGTGAGTAGGTAATTTTATAATTTATTAGATCAACTTTGGAGATGAAAGATTGGAAATCCTACTGGTAGACATTCACTGGACTAGCTTTGGACTGAAATACTTCCTTATAATCCTTTTCCCCTTATCTTTTCCCTCTAGTGTCCCCTAATTTTTTCTTTAAAGTCAGCGGAGGACTGTATGTGAATCTTTATTGTGGTGTATATGTCTACCATTTGTCTGATTACTTGATGTATTATATCTTGATTTATTTGTTGCCCCTTGAGCCAGCACATGCCAAATTATAAATGAATCCTTCTGGCCTTTATGAGACAGCTTCCCAGTTGTCAAGTGTTTGGCGTACGTAGGCTATTGCCTTTTTTTTTTTTTTTGGCATCTGAAGTGGAGTTGAAGTGAGTTTTTTGAATGTAAAAGTTGAATTTTGAATGTAGAAGCTACTTACAGATGACCAGAAACCGTTGAGTTCCATATTTTAGTCATTGAGCTTTTTATATTCCATTCTCCCTGCTGCCCCTGTTTGAGGCATTTTGGGAGAAAAGGACGCTTAACCTTATGCTTACATAAAGAATTTAAACTCTGACTTATTCAGATAAAATGTCTGGCTTTGTTTTAAGGTTTTTGTTTTTTTTTTTGTCATCTCCCATATGCTTTGGGCAAACTATATTTGATGAGCAATGTGAAAATTTCTGAGGTGTTCATCCCTATTTTTTCTGAAGATAACATGTCTTGTACTCAATACAGTTCACATAGTGTCTGCCTGGTGGAAATTTGGAACTGCCTCCCCAAATCTGGATTGTATTTAGTAGATAAAGAAATCAGTTCCTTTTCCTCATTGTGTCGATAATCTACACTCCGTCTGTTGGAGTAGGGTACGCCTTGATCACCTGTTGGGAAAGAGGGAAGAGAGCTAGCTCCTTCACCTGTCTGCAGGAAGGAGGATCTTAGGAAGGCCACCAGGAGGAGAGAAGCATTTCCTTTGATGAAGTCACATCCTGCCTGTGAACCCACTGATACTGTTGACGTTGGCCTGAAAATTAGAGGGTGTTCCTTAAAAGTGTTTTCTGTCAGTACAAAACGTGATTGTATCAGCTCTTGTAATGTTTTCTTGACCCTTATGGAAGGTATAAATCCACGTAACTTCTTTCCTAGAGAACTGGGAAAGTGTCCTAGAATTAAAAAAAAAACAAACACAAAATGTGTATAGTTGAGTGGACATGGATAAGCAACAGTTTGTTATTTTGCTGGGTTTGTTCCTTGGTATTTGTTTTCTGTTATCCTGTAAATATGATAATCTGTTTATATCCTTTTGTATATCACTGATACTGAATTGGGTAGAAAAATAAATTGACAGTTTTTAGAAATGGGACTGTTAATTGAAATATGCGTATCTGTAAGATCAGTTATTTAATTTCTGGTGTATATGTGTATGTGTTGCATTAGCCATTTTAATCAATCTGAGACCCGATACTTATAAAACCTGAAACATGTCTTG EMBV3_32910 TTCCGTTCTGCCGTCCTCCCCACTCCTTTCAGGTTTAAGTCAAAAACGTAGATGCCTCAT Gene GeneID:523615|MIDN:XM_002689146:140_cdna Constitutive 0 NULL GeneID:523615 7 GENE MIDN NULL midnolin EMBV3_11716 AGATGGTATTGCAAAGGGGGGGTTACGGTGTGTTGATGTGGATCTGGATGGTACCCTAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14251 CTGGCTCACTTCAGGTATACCTCACTGTATGTAATAGTGCTAGAAGGAAAGAAGTTGGGG Gene GeneID:533481|TAT:NM_001034590:348_cdna Constitutive 0 NULL GeneID:533481 18 GENE TAT MGC166140 tyrosine aminotransferase EMBV3_22008 CACATATTCCACCCAGAAAGGCTGAGAAAAGGAATGGGAGCTGAGAAGAATCTGCGGGAG Gene GeneID:614972|NIPSNAP1:NM_001076356:86_cdna Constitutive 0 NULL GeneID:614972 17 GENE NIPSNAP1 MGC139917 nipsnap homolog 1 (C. elegans) EMBV3_36896 TTCTTCGCTGGCAGGCGGGTTCTTTACCACTAGGGCCACCTTGGAAACCCATCATCTATA Gene BVT0101_074992 + 0 NULL GK000007.2:104340310-104521252 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218245 TCONS_00218244 1 XLOC_131656 NonCoding TCONS_00218245 XLOC_131656 NonCoding NonCoding - 7:104507674-104510431 - TSS162300 965 3 TCONS_00218245_2 47 0.205181347150259 3 0.650943396226415 0.00101513834329453 0.000645598006743324 0.000968551561662334 0.000473292828309754 0.000808367295351153 0.000266888479614839 0.00042906790101237 0.000255294035252778 0.000490577480731131 0 0 0 8.91943948859706e-06 0 1.6219698318939e-10 0 0 0 0.00123527231407192 0.000812295001335388 0.000166728412133611 0 0 0 0.000940548562272295 0.00130687720528463 0.000610201070267866 0 0 0 XM_005207587.1 SYNPO2 PREDICTED: Bos taurus synaptopodin 2 (SYNPO2), transcript variant 7e-41 172 78.11 0.193782383419689 0 noncoding 1 0 0 0 -1.37893969095921 0.0123543345573289 0.0309235796836361 0.622134769095112 TCTTGCCCAAGGATTAGAGCGACTACTAGCTAGGGCAAGGGGCAATCCCACTGACGAACAGGGTATAGATGAAGCAGGCCCTGGTCCAGCAGGGGACGCAGAGAGAGCGAGAGAACAACCATCTTGAGAGGCCTGATCATACAGTATGATGTAGTCATACAAACTATGACTGTCAATCTATCAACCAATCATCTACATCTAGTTGCTTCCGTCGTGTCCGAGTCTTTGCGACCCCCTGGACTGTAGCCTGCCAGGCTCATTTACCCATGGGGATTCTCCAGGCAAGACTACTGGAGCTGGTTGCCATGGATCTTCCCGACCCAGGAAACGAACCCGCGTCTCCTAAGTCTTCTTCGCTGGCAGGCGGGTTCTTTACCACTAGGGCCACCTTGGAAACCCATCATCTATAGGTTGATCATCAATTTATTTACTTGAAAGAATCTACCCGATTCAACTAGCAATAGTATCCGAAATTTTCTTCGGGAAACGAATCCCTTATAAGTAAACAGTGTGGTCACTGCGGGACGTGACCTTATCTAGATTTGATGCACCACACTTTCTTTGTCCAGAGTGACTGGTTCTGAGGTTGATGCATGAAGCAAATCAGGCCAGTCAGTCAATGTGTTGAAACTCTTGAGAAATTGAAGCTATCTGTCTCAGACTCACTGCTGGTGGGGTTCGGACTCAGAGCTGCTGATCGCCACTTTCATTACCACATACATGGAGGGTCTGCATGAGAGTGAGTCCTAGAAGGAAGGGAGCCAAACCAAGGGGGTCCCCGTGAGGGATGCAGGGAGACAGGATCCTGATGGCACCAGCTGAGTCTTGGCATCTAGCCATGCTTGGGCTTTTTTGTTACCTGAATCGATCAGTAATAATCCTTTTTCTTGACACATTAATTCTTGATTATTATATTCATTATTAATTCTTAATAAACATGAGTTATTCTTCAGCCTATTTCTTAG TCONS_00214778 TCONS_00214779 TCONS_00214783 TCONS_00214784 TCONS_00214785 TCONS_00214786 TCONS_00214787 r 3' 5881 TCONS_00214778 TCONS_00214779 TCONS_00214783 TCONS_00214784 TCONS_00214785 TCONS_00214786 TCONS_00214787 r 3' 6407 EMBV3_06430 GAAGATGGCTCCAAAAGGACAGGCAAAGTCATTCACCAAGTTAAAGCCAAACCTTCTGTG Gene GeneID:506451|SPIN2:NM_001079770:106_cdna Constitutive 0 NULL GeneID:506451 X GENE SPIN2 NULL spindlin family, member 2 EMBV3_14412 GAAAGATCCGGTCAAAGCCATTGTGGTTAAGAAAGTCCTTGAGGAGGTAGACCAGCGCAG Gene GeneID:511540|KRT25:NM_001075523:121_cdna Constitutive 0 NULL GeneID:511540 19 GENE KRT25 MGC139984 keratin 25 EMBV3_42485 TCCCCCTGGGACCACAGCAAGGCTCACTTGGAAGAAACATATGAAGGAATCACTCGCCAT Gene BVT0102_171110 + 1 EMBV3_23587 GK000026.2:43975498-44047470 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05617 CTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTTACACACTGGCTCAGTTCAGCAGG Gene GeneID:100313011|MIR24-1:NR_031098:2_cdna Constitutive 0 NULL GeneID:100313011 8 GENE MIR24-1 bta-mir-24-1 microRNA mir-24-1 EMBV3_12509 CACAAGGACAGTGGGAGATTATTAGGGATACAGTCCCTGAGACACTTCTTTTCAGCAGAG Gene BVT0102_430134 + 0 NULL GK000023.2:3688416-3946456 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26230 GCATGCTAAGAGCTGCACTCAACTGTGTTTTATTGCACATGGTGCTTCCTTTTCAGGCAG Gene BVT0101_017426 + 0 NULL GK000017.2:52785562-52974077 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43240 TTATGCCAATTTTAAGAGCATCGCCCTACCCACCCTCCCTACACAAACAGAATGTGGTGG Gene GeneID:537682|SOS1:XM_002691241:215_cdna UTR3_Alt 2 NULL GeneID:537682 11 GENE SOS1 NULL son of sevenless homolog 1 (Drosophila) EMBV3_39652 GGCTATGTGCTTGACGGCGGTTGTGTCCCTTTAGGAATGCCCAAGGCAAAAAGTGTTGCA Gene BVV0102_310244 + 0 NULL GK000008.2:101492587-101520560 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226451 TCONS_00226450 TCONS_00226452 1 XLOC_138003 NonCoding TCONS_00226452 XLOC_138003 NonCoding NonCoding TXN 8:101489548-101496083 x TSS169311 1797 4 TCONS_00226452_3 57 0.10740122426266 3 0.725436179981634 6.74643777525021e-06 0.000148526878991615 0.000155725631895801 1.19120293960029e-128 3.58917715322344e-42 8.57942743599042e-11 9.73401975810477e-06 0.000401937765202028 5.0057139367831e-05 0 0 0 1.59591854701658e-06 0.000198943242870102 1.91102386709791e-05 4.54483056981335e-20 0.000385663368774457 1.39549662387183e-05 0.000115709490129212 0.00128060820970467 3.37837456093314e-23 4.05446796959394e-43 4.46331524157813e-05 0.000283726763465053 4.62648100500273e-05 5.1142363912433e-05 1.13828747582607e-34 0 8.10299625133369e-06 3.26298268492636e-06 NM_001206453.2 BIVM Bos taurus basic, immunoglobulin-like variable motif containing (BIVM), mRNA. 4e-41 174 79.62 0.113522537562604 0 noncoding CAAAATGAGGAGATGGTTTTATCTACAGTGTTCCAAAGCAACCAGAGGACCCACTCCTGGAATCTGTAAATTCCATGGGGAATAATTCGTGGCATGACAATGAATTGCTTTTTGTTTGCATTACTTCCCTTGTGAATTCTGCTGACTGACCAGGTCAAACCAGCCACTCTTTACTGCAAGATCCAGTCTAGGTATCCCACTTGGATCTGAAATAGACCCCAGTGGCTCTAAACTACCAAAACCTCAGTTGTCTTGGATGACCAATGGCACCAATTTTAGTCCATCAGGATGAAAACTGAAAGTGTACTCAATATTTACAAGAAACATTCAAATCAGCTTACCTTTTGATTGACTCTAGGTCATAGTTCTGAAGACCCATTGATTACAACCCCAGATCAGTGCTTTTTCTGAGTAATGAACTTCCTGTCACCCTTGTACATCTTGCCATTAATGAGGGGAGGAAAGTGTCACAACTAAATAGGAAACTAAATACGACCACTAAAATAGGAAAAGACTGAATTTTGAAAAGACTGTGCTCCAGGAATCAGTCCATTTTTGGTTTGTAGTTGTATGGATTCTGAGACACATCAGCTAGACCAAAGATTTTTCACTCCTTTCATGGGTTTTCAGAGATTCTACTGAAGAAGTCGCCAGCCTCTACAGAGGATCACCCCTTACTCCCCCCACCCCCCCATAGACTGTTATTAGTCATTCAGTAGATACTGACCCCAGGCTTTCCTGTGGCTCATGGTTAAGAACCCGCCTGCCAATACAGGAGACGCAGGAAATGTGGGTTTGATCCCTGGGTTGGGAATATCCCCTGGAGAAGCAAATGGCAACCGACTCCAGTATTCTTGCCCAAGAAATCCCATGGACAGAAAAGCCTAGAGAGCTACATTCCATGGGGTCACAAGTCGACGCGACTTCACAACTAAATACACAATCGATGTTGACCCTAACCTGAAGAAACAGCCTCAACACTGTATAAAGCGTCAGTAACAGAAACATTCATCGAAGCATGGAAAACTGCCTAAAATGTCCAGAATGTCTTCAATTATTGAAATGATTCCAAAATCTTCTAATTACACAGAAAGAGTTCAGGCTAAATGAGACCACAAACACACACCTCAGAAATAAAAACGTCAATTATCTGTGGCTGCTTCTAGGAAACAGATCTCTCTCTTCCCAGATTTCCTGCAATGATCTTTATGTTTCTTGATCGTAAAAGGGAAAAAAAGGAACCATTAACATTGAAACCTCCATTCCTCGAAGCCAACCTCAGATCTGAACCAAGTACGGGCACTCCACTCGCCTTTTCCGGCTTTACTGGGGTGGGAAGTTTTCTCCCACTGACTTTTCTGACTCTGGATTAGCATACATTTCTTGGGGCGGGGGTGAGGGGGCACAGTACACCAGACACTCAGGCTCTGAATCTCAGAGCAGGAGAGTATTAAGTTTGCAATAACTCTCGATATATGCAACACTTTTTGCCTTGGGCATTCCTAAAAGGACACAACCGCCGTCAAGCACATAGCCGGCCGCGGCCGCACCCAGGGGACTCCGGGCTCCAGCGAACCCCACAAACCGAGAAAGAATCCCAGATGGGTAGGGCAGTGGAGGCCCCCGGGCCCAGCCTCGGGGACTGAGTCATTCCAAAGCCAGCGCTGCCGGAAACACGCCCTGCGTCGCAGGAGGAGGAGTCCCGAGGGCGCGGCCCGGACTTCACTTCCTTGCCGCCACCTGGGCTACTAAAGCCGGACTCGTAGGGGTTGGGGTGGGGGTGTCTCCAGCCCGGAA TCONS_00228863 r 3' 764 TCONS_00228863 r 3' 916 EMBV3_35356 ACGTTGAAGATCTCCAGCAGCTCCAGAGAGGTGATGTACTTCATGATACTGCAGAACTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11527 CTCCTTGCAAGTGTTCGAGCTCTGGATCATGCTATGTCTGTTGCAAGTGACCACAATGTG Gene GeneID:514918|GCFC:XM_002684581:84_cdna Constitutive 0 NULL GeneID:514918 1 GENE GCFC MGC143327 GC-rich sequence DNA-binding factor homolog EMBV3_21982 GTCTAGTCAAGACAGACTATGCCAAAGCCAAAGCCAAAAAGACTATGGCTTTTCCAGTGG Gene GeneID:517231|MGC165939:NM_001102041:118_cdna UTR3_Alt 2 NULL GeneID:517231 12 GENE MGC165939 NULL Uncharacterized protein C13orf18 homolog EMBV3_22692 GTGACAAGCATGGCCTGTACAACCTCAAACAGTGCAAGATGTCTCTGAACGGGCAGCGTG Gene GeneID:282260|IGFBP2:NM_174555:29_cdna Constitutive 0 NULL GeneID:282260 2 GENE IGFBP2 NULL insulin-like growth factor binding protein 2, 36kDa EMBV3_14081 GAGCAGTCAAGCCAGTAAATCTCACTCCCTAGTGAAAAATGGGTCCTGAAGATTGGGTCC Gene BVT0102_268699 + 1 EMBV3_01680 GK000017.2:23531014-24083434 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02886 AGGGGGTTATTGAAGCAGGATCATTTCAAGGTAGCCAGAGAACACAGACAAAAAGTGGTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05836 AACAGGGCATTGGCCACCGATAGAAGGGAAGCAGGCAAAAAAGGAGGAGGGAAGAGGTTA Gene BVV0102_121448 + 0 NULL GK000029.2:44419681-44420405 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35978 AATCATGCCGAAGCACGAGTTCTCCGTGGATATGACCTGTGAAGGCTGCTCTAACGCAGT Gene GeneID:613998|ATOX1:NM_001130758:11_cdna Constitutive 0 NULL GeneID:613998 7 GENE ATOX1 MGC127392 ATX1 antioxidant protein 1 homolog (yeast) EMBV3_15434 CTCTTGTGGTGGAATGATGTGCCTTTCCTTGCCTAAACCCCTCCTGGTGTGTCAGCATTA Gene GeneID:515537|CLDND1:XM_002684701:16_cdna Constitutive 1 NULL GeneID:515537 1 GENE CLDND1 NULL claudin domain containing 1 EMBV3_03829 CTTGGGCATCAACAATACCGGATGACACGCTACCAAATGGGAGTCCAAAGGCTCAGGTTT Gene BVT0102_263729 - 1 EMBV3_20748 GK000025.2:9359613-9423795 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00148039 1 XLOC_089923 Coding TCONS_00148039 XLOC_089923 Coding Coding - 25:9397779-9400051 - TSS110574 2272 1 TCONS_00148039_4 151 0.503521126760563 1 0 4.79072969557053e-05 0.000157006820813152 0.000233521460046681 8.78417129018746e-05 0.000106479704571083 0.00017104853641854 6.16025518041475e-05 0.000237442870463951 0.000328755168278232 9.05480999718014e-07 1.00756380279776e-06 0 2.52577694220516e-06 9.66193093377909e-06 4.9975119347258e-05 0 0 0 4.31350867112632e-06 0.00121729936347217 3.60760454371954e-05 3.26614878330889e-06 0 0 0.000103683137882558 0.000158150856071497 1.03154024653142e-05 4.22763414512101e-05 0 0 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 0.0 1097 88.77 0.373239436619718 TCONS_00148039_4 sp|Q10126|YSM6_CAEEL YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6; 9e-09 53.5 28.00 0.874172185430464 1 noncoding 0 0 0 0 -0.0154942803924091 0.887099513697003 -0.0208880221143503 0.723459675231725 GCAGAGTACATCATGAGAAATGCTGGGCTGGATGAAGCACAAGCTGGAATCAAGATTGCTGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAAGAACTAAAGAATCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGTTGGCTTAAAGCTCAACATTCAGAAATGGAAGATCATGGCATCTGGTCCCATCACTTCATGGCAAATAGATGGAGAAACAGTGTCAGACTTTATTTTTTTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAGTTGAAAGACACTTGCTCCTTGGAAGAAAAGTTATGACCAACCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCAAGAAAGGTCTGTCTAGTCAAGGCTATGGTTTTTCCAGTGGTCATGTATGGATATGAGTTGGACTATAAAGAAATCTGAGCACCAAAGAACTGATGCTTTTGAACTGTGGCGTTGGAGAAGACTCTGGAAAGTCCCTTGGACTGTAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATTTTTGAAGCTGAAACTCCAATACTTTGGCCATCTGATGTGAAGAGCTAACTCATTTGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAAGAGAAGGGGATGACATAGGATGAGATGTTGGATGGCATCACCAACTCAATGGGCATGAGTTTGAATAAGCTCCGGGAGTTGGTGATGGACAAGGAGGCCTGGCGTGCTGCAGTGCATGGGATTGCAAAGAGTGGGACACGACTGAGTGACTGAACTGAACTGGGTGTCCAGGAGGAGAATGAGTCCAGGTCCCTCTGAGACATAAAAGAGTCTTCATTCCTTTTATTAAAAACCCAGCACCACTGCCTTCAGGGCCTCTGATGAGCTCTGAGCCTCCATTTCCTCATCATGAGATGGGGCTAATTGCAGCATCTCAGGATGTTTACACAGGGATGAGAATTAGGTAAAATGTGGGTCCTGAATGCTAAAGAACAGAACAAATGTTTCTTTGTGGTGGGATTTATGCCTGATCATGCAGAGCAGCCAGAACAAGAGAAGCGTTAAGGAGAGGTGGTCCTGTGAGGTCTTCATTCTCCCTTGCTGCTGATGGCGAAACCACATGCCTGATGCCACAGGCCCTCATCCACAGAGGTTTCTCTCCTGGAGACAAAAGATGGTCACGTGCTGGCACCTTGATGCCGAGGGCTGATGTGGACCTTTGGGGAGCACACTGTGTGTGAGAGCCCTGCCCTACCTCTTGGGGAGCTGGCAACATGGGATCCATTGGCTCACACGCCCGCTTTGATTCCTTGTTGTAAATGCAGTGTGTTCTGTCCGGGCGGGGGCGGGGGGGATGCGGTGAATGGGAGCATTCCCTGCCCATTGATTTTCTAGGCAATAACAAATACCCCAGCTGCCAGGGGGGCGGGCTGGTAAGTGTGGCTCCTTATCTGTAAGCCTTTGTACATGATCACATACTGGTCCTTTGTGTCATGAGAGGGCTGTAGCCAGGCCCTCTCCTCTAAAAACCCATCCCATCCCAAAGCGTGTTTCATCCAAACCTGCACACCAAGCCAGGCAACAGTTTCCATGCAGACCTGGCACCTTGGGCTGGAGGTGGGAGGTGGGGCAGGTAGAGAGAGGGAAGACGGGGAGGGGCTGAAGTTTCTTTAAAGCCCGAAAATGCAGGTGTGCGAGCCTGGACTAGGCGGTTCAGGAGGAGAAGCCCCAGGCACAGTCCTGGTGTTCAGAAGACATTTTCATTGAATAAGCTGAAGGCAGATTTGTCCTGATCACTCAGGATAAAACCTGAGCCTTTGGACTCCCATTTGGTAGCGTGTCATCCGGTATTGTTGATGCCCAAGGACTAAAGCAGCGTTTCTCTAAATATGGTCCCGGGATCACCAGTGAGGGAATCCGCACTATGTGTGGTGATGGTGGTGGGGATGCTTGTGAGAACATTGATTTCTGGACCTCGGGGAAGACTTACTGAATCAGAACCTCTGGGGAAGGGGCTGAGGAATCTGCATTGTAATTACTTCCCCAGGTGATATTTATGGACGATGACATCTTACATACAAAAATGTATAGATTCTGTTTTTATTTGGCCCCTATTTATAGATTCTATGCAACCATTTTTTAAATTTACTTAATTTTTAATTGAAGGATAATTGCTTTACAATGTTGTGCTGGCTTCTACTTCAC TCONS_00146163 . 3' 23745 TCONS_00146163 . 3' 26016 EMBV3_04924 CACACGCTCACGTCCCCACTGGCGCCATGAAAGTCGTCTCTAGTTTTTGTAGTATGCAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34438 CTACAGAATGAAGGTGCCCCAGGACTTCTGCTCTGTCGCTATGGAAGATGTGCCCCGGAA Gene GeneID:789483|ANKRD53:XM_002691229:77_cdna Constitutive 0 NULL GeneID:789483 11 GENE ANKRD53 NULL ankyrin repeat domain 53 EMBV3_41576 CCCAATAACTACTGTGACTTCTGCTTGGGGGGCTCCAATATGAACAAGAAGAGTGGGAGG Gene GeneID:787359|DPF3:XM_002691052:459_cdna Constitutive 0 NULL GeneID:787359 10 GENE DPF3 NULL D4, zinc and double PHD fingers, family 3 EMBV3_14114 GCTTCTGAAACAGTCAGTCTCCTCCAAGTCGAACGAACTCAAGGCTACACTCCTCAGCAG Gene GeneID:100196900|LOC100196900:NM_001143748:670_cdna Constitutive 0 NULL GeneID:100196900 13 GENE LOC100196900 NULL hypothetical LOC100196900 EMBV3_28108 AGGCCTTCCTAGAGCAGTTTCGCAAGGAGGACATCTTCAAGGAGAACTTTGACGAGCTGG Gene GeneID:541101|TUBG1:NM_001076255:207_cdna Constitutive 0 NULL GeneID:541101 19 GENE TUBG1 MGC142358 tubulin, gamma 1 EMBV3_29234 GAGTGAACCTGTGATGGTAAAGAGTAGAACAGCGAATGTTAAGCAAGTGTTGATTGGGAG Gene BVV0101_003856 + 1 EMBV3_10272 GK000022.2:29056985-29307067 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39547 TGCCTCCTACCGTGACCTCCCTTCTGAGGAGTATAATCATGTAGAAGGATATGACAGCTT Gene GeneID:510784|TMEM81:NM_001075465:49_cdna Constitutive 1 NULL GeneID:510784 16 GENE TMEM81 NULL transmembrane protein 81 EMBV3_39144 CAAGGGTTTCATGGCCAATTACTGCCACGGAGAGTGTCCTTTCTCACTGACCATCTCCCT Gene GeneID:786521|LOC786521:XM_002687847:209_cdna Constitutive 0 NULL GeneID:786521 5 GENE LOC786521 NULL similar to growth differentiation factor 3 EMBV3_29530 GTTTTGGCCTTTTAGGAGAAAAGTAAAACAAAAGCCTGATATTTATTTCCAAATGCATTG Gene GeneID:512717|RCN2:NM_001075579:73_cdna Constitutive 0 NULL GeneID:512717 21 GENE RCN2 MGC140664 reticulocalbin 2, EF-hand calcium binding domain EMBV3_20707 GTGGTTAGTAATTATACCTCAGAGTGGGAACTGGAGCCTGTCATAGATGTCCTGATCCTC Gene GeneID:508348|IFI44:XM_002686295:165_cdna Constitutive 0 NULL GeneID:508348 3 GENE IFI44 NULL interferon-induced protein 44 EMBV3_03897 GTGGTGCCTGTATACCCCCATGATCCATCTGGCCCAGTTCCTCATATCAGCTGTGCTAAT Gene GeneID:515944|MFSD8:XM_002694355:116_cdna UTR3_Alt 2 NULL GeneID:515944 17 GENE MFSD8 NULL major facilitator superfamily domain containing 8 EMBV3_03324 AGCCTTCCTCAAAAAGTCCGGGAAGCTGAAAGTCCCTGAATGGGTGGACACCGTCAAGCT Gene GeneID:516063|RPS19:NM_001037467:232_cdna Constitutive 0 NULL GeneID:516063 18 GENE RPS19 MGC133566 ribosomal protein S19 EMBV3_40864 TCATCCCAGACCTATTGGAGATCCCAGCCTAGCACATCAAGATGGGGTGATGGACAGGAA Gene GeneID:507065|RBM19:NM_001045955:81_cdna Constitutive 0 NULL GeneID:507065 17 GENE RBM19 MGC137249 RNA binding motif protein 19 EMBV3_41852 CAGGGCTGACATCAAGGAACCTCTCATTTCCCCTTGCCCCATCTGCACTACTGAAGTATA Gene BVT0101_002633 + 0 NULL GK000011.2:92279411-92297492 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028753 TCONS_00028756 TCONS_00028759 TCONS_00028761 TCONS_00028762 TCONS_00028760 TCONS_00028758 TCONS_00028757 TCONS_00028755 TCONS_00028754 1 XLOC_015578 Coding TCONS_00028753 XLOC_015578 Coding Coding GGTA1 11:92295904-92315553 j TSS20136 2930 1 TCONS_00028753_2 269 6 0.851180781758958 2.97257560116048e-13 0 1.34521694557949e-10 0 0 0 4.03910246032273e-13 4.64120732594387e-05 2.2875360936585e-05 1.06495273440393e-38 1.69198407029958e-05 1.57088763177413e-05 0 0 3.49828549900766e-34 0.0232767921194126 0.0271500269053071 0.0187654064595237 0 4.888382495065e-06 0 0.00210169016666598 0.0075911168606392 0.00956163327192233 4.1268930205411e-05 0 0 0.00146267072503246 0.000938298762704637 0.00123644373726534 XM_005212922.1 GGTA1 PREDICTED: Bos taurus alpha-galactosyltransferase 1 (glycoprotein) (GGTA1), transcript variant X1, mRNA. 0.0 3543 100.00 0.669965870307167 NM_010283.3 Ggta1 Mus musculus glycoprotein galactosyltransferase alpha 1, 3 (Ggta1), 0.0 874 75.77 0.424232081911263 TCONS_00028753_2 sp|P14769|GGTA1_BOVIN GGTA1_BOVIN N-acetyllactosaminide alpha-1,3-galactosyltransferase; 0.0 564 100.00 0.996282527881041 1 coding 0 0 0 0 -0.0108296934718482 0.926160574191521 -0.0172333744440225 0.769665346376736 GAGAAGGAAGCAAGAAAGATTTAACCATTGGGCACAGCTTCCGTGCACAGAACGGTGGAAGAATCCAAAGGCTCTTTGTTCTGGATAAACCCATCAAGAAACCCAGAAGTTGGTGGCAGCAGCATTCAGAAGGGCTGGTGGCTTCCGAGATGGTTTAACAATGGTTACCATGAAGAAGATGGAGACATAAACGAAGAAAAGGAACAAAGAAACGAAGACGAAAGCAAGCTTAAGCTATCGGACTGGTTCAACCCATTTAAACGCCCCGAGGTTGTGACCATGACGAAGTGGAAGGCTCCAGTGGTGTGGGAAGGCACTTACAACAGAGCCGTCTTAGACAATTATTATGCCAAGCAGAAAATTACCGTCGGCCTGACGGTTTTCGCCGTCGGAAGATACATTGAGCATTACTTGGAGGAGTTCTTAACGTCTGCTAATAAGCACTTCATGGTTGGCCACCCAGTCATCTTTTATATCATGGTAGATGATGTCTCCAGGATGCCTTTGATAGAGTTGGGTCCTCTGCGCTCCTTCAAAGTGTTTAAGATCAAGCCTGAGAAGAGGTGGCAGGACATCAGCATGATGCGCATGAAGACTATCGGGGAGCACATTGTGGCCCACATCCAGCATGAGGTTGACTTCCTTTTCTGCATGGATGTGGACCAGGTCTTCCAAGACAAGTTTGGGGTGGAGACCCTGGGCGAGTCGGTGGCCCAGCTACAAGCCTGGTGGTACAAGGCAGATCCCAATGACTTCACCTACGAGAGGCGGAAGGAGTCTGCAGCATACATTCCCTTCGGCGAAGGGGATTTTTATTACCATGCAGCCATTTTTGGGGGAACACCCACTCAGGTCCTTAACATCACCCAGGAATGCTTCAAAGGAATCCTCAAGGACAAGAAAAATGACATAGAAGCCCAATGGCATGATGAAAGCCATCTAAACAAGTATTTCCTTCTCAACAAACCTACTAAAATCTTATCCCCGGAATACTGCTGGGATTATCACATAGGCCTACCTGCGGATATTAAGCTTGTCAAGATGTCTTGGCAGACAAAAGAGTATAATGTGGTTAGAAATAATGTCTGACTTTGTGCCAGTACATTTCTGAATTTGAGAGAGTATTATTCTGGCTACTTCCTCAGAAAAGTAACACTTAATTTTAACTTAAAAAAAAATACTAACAAAAGACCAACACAGCAAATACATATTATTTCTCCTTGTAACTTTGAGCCTTGTAATACGGGAGAATGAACCTGTGGTAATCAGATGTAAATTCCCAGTGATTTCTTACCTATTTTTGGTTGTGGGGGCGGGGAATGGATACACCATCAGTTGAACCAAAAAAAAAAAAAAATTGTCACAGACAAAGAAAAAGCCAGAAACATTCTATATGTGCCAATTGACTTACTGGAGAGAAGTACGCAAAGGGAAGTGTTTGGCAACAAGATAATGATTGTGAGGGGCTGTCCTCTTGATTTCTGTGTCTTCCTATCTCTGCTGGGTCTGAAGCAACACAGAGTTGCTTTTGCAGCAGGAGAACTCTTAGTAGGACACAGTCTACCTTGGCGATCCTCAAATGGATCAATTTCCTTTCCTTATCAGGATATTGGCTTCTGTGCCAAGACCAGTCAAAATTCCCAATGCATATGGTGAAGATGTTGGAAGTCACAGGCAATCTGAGTGAGTCAGTGGGTGCTCAGCACATAATGAAAACAAAGCCTCCAAGTAAGTTGGCCATGAAATAAGCAAAGAGAGAGTTGAAAGACAGGGAGCTGATCCCTATGGGGCATTGCCTTCTCTGAGGGGCACAGGGCATGTGGCTGGCACATAAATGCAACACGGATCCAGGCAGTGTGGGTGGTCTCCAGTTTCCTCAGCCATTATGACAGCCAGAGCAGTGTTGTCTTATGAGATGCTTCTTGTTTTGGCCGAGTCATATTCAGTATGCCGGACTCTGGAACTTGAGTCTTCAGATCCTTGGCCAGACAAAGTGGATGGTGTCCGAGGAAACCAAAACCTGCAGGGGACTGAAGAGAATTGCCAGGGGTTACATTTCCCAGACCTGGGCTTCATGACAGTCAGTTGTCAGCAAGTCCTGCCACCATCTGCCCTAACCCTCAGCCCATCAAGCCCCACGTTGCAGGGCTGACATCAAGGAACCTCTCATTTCCCCTTGCCCCATCTGCACTACTGAAGTATAACAACCAGATGTGTTTAATAAAATGGTTAGTTGATTTTATGTCAAAAGTAGAGGGGATGGCGATGGGAGATCCAGTCCTTGTGACTGAACACCTTACCATTCAATTCCTTTCTCTAAGAGAAGCTATGAAATTGTATATATTATTTAAAGTTAAGCAAGTCAGTGTAAAGGAGGCAACATTTACATATGCAGGCATGTTTATATTTTGCTCGTGTTCCAGTTTATGTCATTGCTTTTCATTTTCAAGCAATTGGCTTAAAGAGCCACCTCACTGGCTTGATGCTCAGCAGTGTGGGCTTCTTTGATAAAATGAAACCTCTGTTTTCTCTACTGTTTTACTGTGCCTCCTACTCTTCCGTTCTTGCCAAATTTTTTTACAACCCAGTAAAACAAAAGAAAACCAACAAAAATTCTGAAGAAGTGGGCTTGTAAAAGAAAAGGGAGATCAAAGGTCAGTTAGGACTCTTGCTTCTGTATAATTCAAGTTTTTGGGGATCCATTCTGGACTAGGGAGAGTTCATGGTTTAAGTCTGAAAGCAAAGAAATGACGTTTCTTCAAAGATCAGAGAAAAGGAATGAAGTTTCCTTTTGAAGGGATCTTGATTTTTTTTTAATTCACTTAAATTTAAAATCCAAATGGACAAACTCAAAAATCAATAGTTCAATGTTAAAAAACTAAAATAAAATTCCTGATTTACAATTAAATAAATTATTTTCTCAATATATT EMBV3_11732 ACTGCGGCCGCCCGGCTATTCGGAGCTAAGGGCATCCGTTTTAGAGGCTACAGCATCCCT Variant GeneID:280682|CS:NM_001044721:884_cdna 154^378 3 EMBV3_21714 GeneID:280682 5 GENE CS MGC137617 citrate synthase EMBV3_27314 GGACTGTGCCCAAGGGCTGCTTTATGGCTAGTGTGGCTGATAAGTCAAGATTCACCAATG Gene GeneID:281195|GLCE:NM_174070:20_cdna UTR3_Alt 2 NULL GeneID:281195 10 GENE GLCE KIAA0836 glucuronic acid epimerase EMBV3_29414 GTCAGGAACGTATACACAACATCCAACCTTAATTATAGCACAGGTCTTTCCTTGAGCAGC Gene BVT0102_123200 + 1 EMBV3_15043 GK000026.2:16065396-16130564 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00093072 TCONS_00045931 TCONS_00093070 TCONS_00018347 TCONS_00045930 3 XLOC_057069 XLOC_026577 XLOC_009226 Coding TCONS_00093072 XLOC_057069 Coding Coding - 19:27853855-27856608 - TSS69911 1731 2 TCONS_00093072_3 82 0.072790294627383 2 0.371729651162791 0 0 5.91368272090608e-07 0 0 0 1.08126597381201e-06 2.87836045486989e-06 0 2.25696264238067e-06 2.64426428042002e-06 0 5.8007840470986e-06 2.15006486397557e-06 1.7309372930244e-06 0.0125274312710102 0.00198850395976557 0.00183160064924496 9.18556903866162e-07 0 1.4216773564612e-06 0.00144760219803516 0.00205567987657679 0.00361050481177587 1.49898569784583e-06 1.01535961135092e-06 0 0.000208081888987826 4.59726727916134e-05 0.000552539791974356 XR_228658.1 LOC101902546 PREDICTED: Bos taurus uncharacterized LOC101902546 (LOC101902546), 0.0 2266 100.00 0.725014442518775 TCONS_00093072_3 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 7e-21 87.0 52.00 0.902439024390244 1 noncoding AGTTAAAGTTGCAGGTATTGTCCCTTGGATCCATCATACGAGGGTGAAGAGAACATATCACGCAGACCCAAAAAACGCTGAGTGGACTGCACAGAGCGACCCCACTGGCCCTCGAGAGACTAAGACCATCCTTAAGAAGAAGGAAAAAAAGATCCTGGACCAGCCCCTTCAGGATGAAGCCGCACAATCAACTCCTGCTGCTTGGCCTCATCAACATGATTTTGAATTTAACTTCCGTTCAACTCAGGACAATGTTTTCCTCTCATGGGCACGTTCATACACAGACTTCCACAGCACTTCTAACTGCTGGGTATGTAGGGCTATGCCTCTGTCAGTGATGGATGGACTTCCTTGGTGGGTGTCACCGCTCTGCCAAGGACATTTTAAACCACTCTGCTCTTTTCTGGGATGACAAAAAGAGACTTTCCTCTCTCTTGTCAATCATAACCTCTCCTTGCTCTCCTGGTGTAAGACCTACAGTCAATAGACTCGGGTCATGGGGTTACATTTGATATAAATTCCAGTGTAACAAAAGCCTAACCTACAACAAGCCCCGGTAAATCTACCTTATTTACATGCTAGGTGGACAAGATCCGTGTTTCAGTGGTATGAGTATATTACTGCCTTATTCGTACCCTCTCTAGGGACAACAGATATCATGATTAAAGTAGAGGCCTTCACTAATTTCACAAAACAGGCCCTCCTAGATAGAACAAAAGCCATCCAAGCCTTAAATGAAAAGCAAATCCAAATGAGAAAAGTGGTAATTCATAATAGAATGGCTTTGGACATACTCACAGCTGCTCAAGGAAGGACCTGTGCTATAATTAAGGTTGGATGTTGTGTATACGTTCCTGACTTATCTGGCAATGTATCGACTGCTTTAGATGACATGAAAACCAGGTAAAAGCAATGTCAAACGAAAACATTCCTTTCTGGACTTTGGTCCTATCTTGGGTGAAGGGAGACTGGTGGAAAACTATTGTAACTGTTGTTATAGTAATCTTAATCACACTGCTTTGTGGGCCCTGCTTCTTACAATGCCTTGTGAATTTTGTAACCCAGAGGTTGATGGCGTTCTCTTATGTGGGTGGCCGAAGGACTAAGGTGTAATATATCTCAATGAATATCGCTCGTTATAGAAACTAAGGGCATCAAGAGGGGGGAATGAAGAAGGAATTCATAGGGCCTGGACCCCATCTTAGGCCTGTTCATGCTGATCATGCTCGGCCACCACTCCAGTGGACTCAGGGCTCTGGGCTTAGTGCCTATGGAAACTACCCGCTCTGGACAGGGGAATCTTGAAGATCACATCCAGGTTACTCATCGCCTAAGAGAAAACATACTCTAATCACCCCTGCCTCTGGACAGGTCATAAATTCTTTCTGTATCTATCAGGGTGTAACCGTAGGCTTATTGATTATTAACTGTTTGAACACCTAACACTTGAATGATGGGGTTATTGTGATTGTATTTATCCTTCCTTTGTTTTATGTAAGTCTCAAGGAAATTGGGGTGGTGGGTTTGGACACGTACACATGGGGTATAAAAGATTTTCACAAATGCTGGTCGGGGTCCTTGGCTAAGACCAGACTCTGCCTTGGGCCCACCAGGGTAATAAACTGCACTCCACTATCTGCATTGTTCTTCTGAGTGAGTTTGTTTCCCGGAATGCATGGCTATAACACCGACAGCTCTGCTCAGACTCAGGATGACCCCACAGTCCCAAGG TCONS_00093073 s 5' 4352 TCONS_00093073 s 5' 7104 EMBV3_24284 AGTCATCATTCTCACCGCCCCTTGATTGCCACGTAGGAGCAGAGGCAAGCTCTTTTCCAA Gene BVV0102_017955 - 0 NULL GK000001.2:110286574-110945677 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00001800 TCONS_00001802 TCONS_00001804 TCONS_00001799 TCONS_00001803 1 XLOC_000440 Coding TCONS_00001803 XLOC_000440 Coding Coding SHOX2 1:110278191-110288290 j TSS928 2869 1 TCONS_00001803_2 204 5 0.716379481085363 0.000506420161687967 0.000704745379045027 0.00101406127128541 0.00179321967202504 0.000704970032592092 0.00034218635487089 0.000871610163637441 0.000740772850042145 0.00171565467147057 0.000139801630283623 4.97972219146939e-06 4.95165186024446e-05 2.03041787241603e-18 4.99782454885292e-05 0.000708057150476688 0.000257755272399306 0.000277760683360862 3.49743377560324e-05 0.00100418219089135 5.69361285553812e-08 7.75683063970757e-322 1.06907808268599e-05 1.27877522263614e-05 0.000917402996469457 2.27568110566461e-05 0.000443825385082818 0.000876952937737369 2.80771564554748e-05 3.36797798193259e-05 0 XM_005201726.1 SHOX2 PREDICTED: Bos taurus short stature homeobox 2 (SHOX2), transcript 0.0 3238 99.94 0.626350644823981 NM_001163678.1 SHOX2 Homo sapiens short stature homeobox 2 (SHOX2), transcript variant 0.0 1748 82.66 0.58382711746253 TCONS_00001803_2 sp|O60902|SHOX2_HUMAN SHOX2_HUMAN Short stature homeobox protein 2; 4e-116 338 93.98 0.995098039215686 2 coding 0 0 0 0 -0.0836340160407975 0.724869474629978 -0.0493830306830161 0.428061651410147 GGATCCCCAGGCCCGACGGGGGAGGAATAGGGGGGCGGACGCGGAGAGGGCCCTTGGACCCCAGCTTTGGAAGCCAGATGTCCCCGGAGCTGAAGGATCGCAAAGAGGATGCAAAGGGGATGGAGGACGAAGGCCAGACCAAAATCAAGCAGAGGCGAAGTCGGACCAATTTCACCCTGGAACAACTCAACGAGCTGGAAAGGCTTTTTGATGAGACTCACTACCCGGACGCCTTTATGCGTGAAGAACTGAGCCAACGGCTGGGGCTGTCCGAGGCCCGAGTGCAGGTTTGGTTTCAAAATCGAAGAGCTAAATGTAGAAAGCAAGAAAATCAACTTCATAAAGGCGTCCTCATAGGAGCTGCCAGCCAATTTGAAGCTTGTAGAGTAGCACCCTATGTCAATGTAGGTGCTTTAAGGATGCCATTTCAGCAGGTTCAGGCGCAGCTGCAGCTGGACAGCGCCGTGGCGCACGCGCACCACCACCTGCACCCGCACCTGGCCGCGCACGCGCCCTACATGATGTTCCCGGCGCCGCCCTTCGGACTGCCGCTCGCCACGCTGGCCGCAGACTCAGCATCTGCCGCCTCCGTCGTGGCTGCAGCTGCTGCCGCCAAGACTACCAGCAAGAACTCCAGCATCGCGGATCTCAGACTGAAAGCCAAAAAGCACGCGGCCGCCCTGGGTCTGTGACTTCAACGCCAGCGCCAGGGTCGCGCGTGCAGCACGGCGCGCAGCCTGCATGCCCTCCGAGCCCCGCTGCTTCTCTGTTACCTGCCCCGGACCTTGGAATCCGAGCCTCTTTCTGCCCCACCGATGGCCCCTTGCCCCCTTCTGCATCCCGGACTCGGAGGGCAGCACCCGGGATCCCAAGAAGGGCACCAGCTTCGTGGCTCCTGACCATTCACCTGTCTAGGGGCCTAGAATTTGGCTTTGTAGGGATGGGTTTGGGAAGTCTGAAGAGTGCTGGGACAGTGAAGTGTGGCTCACGGTAAAACTGCAACGATGGACTTTTGCGTAGAAATAAAAATCTTGTTAGTAAAAAATGAGGGGGAAACTGTAGAAAAGACAAACCAGAGAGAAAAAGAGAAAGGGAACTTATTGCTATTCAGCAGAAGCTGAAATCGGAGAACCAAGGAATAAAAAAAAAAAATTTTAAGTATTTTGTACATTAAAAAATATGGAAAAATAACCGGGACAAATCTCGAGATAATTGGGCGGGAGTCACCAACTTAAAGTGTATTTTTTGTTGTTGTTGTTGTTGTTTTTTAATGGGCTAAGAAAGCAAAACTGAAGGAAGAGGTATACTTATTTAAAGAATTAAGATGAAAAAAAGTACGCAGCTGGGAAGTTCACAGGTTTTGAAACTGACCTTTTTCTGCGAAGTTCACTTTAATACAAGAAATTTGATAAGAGAGGCGGGCCTCCTTTTACGTTGAATCAGATGCTTTGAGTTAAAAACCACCACGTATGGAAGAGCAAGAAGAGGGAAGACAGTATAAAAACAAGGAGATAAAAAAGTGATATTAATACAAAAATGATAACCACAATGATTTCTCTGAGAAATTGTTATGGCAGAACTGTCCAGACTGCTGACAGTAAAGTCCCGGTTTGCATGTTACTTGTATTCCATTGACGGTGTCTCCCCACCTCTCCCGCTTTACTCACTAGCACTTAACTGCATTTTCATTTTCGGTATGAAAAACAATACCCAAAGCATCTGAAAATTGATATATATTTCTAGCTATATATTTTTAGTCCCATCTTTAATCTTGGGGGGACAAAGAAAAAAGTTTGAAGGGCAAAAAAGTTACACTCTGATTGTCCCAAGACGACAGAGGCAAGTAGAAAATGTGGGGAAAAGAAAAGAGAAATATTAAAGTACAGCGCCTCACGTGGTGCCTGATACACAGTGGGCGGTCAGTGTTAGTCCCCCTCTCCCCTTATTCTTGTATTCCCTCTTGCAGATTTCCTTAAGTCCTATTTGAGGACCGTGCTTTATTTCCCCCTCTCAGTCCCATCACACTCACTTTAAACAACACCCAGCTAGATACCGGCACTAAGTTTGTGTAAAATATGTTGATACACACGAGCAAAGTTTATTTTGGCTATAATGTGTGAACTAATGGTTGACTTTCAACATTTGCATTTTATCTCACAAAGGTGTATATTCAAATAATTTTTTTGTTTGTCTCAATTCATGTAGCTATTTAAACTGGGGTACCCTGGACTGAGCAATCTGTATCCCAATTCTTTAAAAAGTCTCCTTAGTTTTTTTTTTTTTTTTTTTTTTTAATCCCTTCTAATTTACAAGAAAGAGGAAAAGCTCTTTTAGCTGAACTTTGGTATGCAGTTGAGCTTTGTAACTATTTGTTCTCCATGAAAACAAAATTATTTATATTTGCCATATTTTTTCTAGTGTATTAAGTTATTTTAAACAAAAGAAGATGCTGTTATTTCATGACGTGTTGTCGGTACAAAATGTTTTGGTCTCACCTCTGTTAAACCTTTTAAATAAGTGCCAAGTTATTAATTGAAGACACTTTGCGATCAATTGAATGAAAATAGTATTGTTTCATTTGATGGGGTTCGCGTCATCTTTACTCCTGTTGCTATTAAACTATCCAGGATAGTCTTTCCTTCTTCCTTTTTGATGAGTATGTTATCTCTCTTGACTATACCAGCTTGGAAAAGAGCTTGCCTCTGCTCCTACGTGGCAATCAAGGGGCGGTGAGAATGATGACTCTCGTGGCTGTCTGTAGCGCTGAGCGAAAATCCCCCTCTCCTGCCCCATTTCATCCACCCAATGAAGAAAACGGATTGATTTTACACTAAATCAATAAAGGAACAGATACTATGTAAAATAACAG EMBV3_26569 AAACTACCTAACTGTGAAGAGCGATGAAATCTCTGGATGAAACCGCCTGAACCCGGCCAG Gene GeneID:615969|ENOX1:XM_002691825:511_cdna Constitutive 0 NULL GeneID:615969 12 GENE ENOX1 NULL ecto-NOX disulfide-thiol exchanger 1 EMBV3_28364 AACTTAATACAAGCAGACTACATTTCACAGGACTGCTGCAGATCAATGATAAAATTGCCC Variant GeneID:529245|ORC4L:NM_001046301:106_cdna 220^463 5 EMBV3_43727 GeneID:529245 2 GENE ORC4L MGC133948 origin recognition complex, subunit 4-like (yeast) EMBV3_01633 CTAGAGCCAACAAGAGATCACAGAGCATTTGGGGGTGGGGAAAAGGGAAGTTTTGTGGAC Gene GeneID:613296|TCHH:XM_002686034:216_cdna Constitutive 0 NULL GeneID:613296 3 GENE TCHH NULL trichohyalin EMBV3_40768 TTTAGTGGACTCGCCCCCCACCCCTCAACTCCACCACCAAGGGGAACAACCACAAATTCA Gene GeneID:100140088|LOC100140088:XM_002689466:32_cdna Constitutive 0 NULL GeneID:100140088 8 GENE LOC100140088 NULL hypothetical protein LOC100140088 EMBV3_15790 TTCCTCTCCACAGCAGTCAGAAGGCAGTCACCCCCAAGAGAAAGGACAAACTACTCCAGA Gene GeneID:537422|DRP2:XM_002699818:49_cdna Constitutive 0 NULL GeneID:537422 X GENE DRP2 NULL dystrophin related protein 2 EMBV3_05331 TTCTAGAAACCAAAAGCAAACCAGATTTCCAACACCATGGCTTGCTGTGCTCCCTTCTGC Gene GeneID:100294937|LOC100294937:XM_002695971:309_cdna Constitutive 0 NULL GeneID:100294937 19 GENE LOC100294937 NULL similar to keratin associated protein 3-3 EMBV3_04578 GGGCCCTCACCTAAAATCAGGGAGCAATTTGTGTCTTCGAGAATCTGACTCAAAAAGGTA Gene GeneID:506286|ICK:NM_001098887:237_cdna Constitutive 0 NULL GeneID:506286 23 GENE ICK MGC157129 intestinal cell (MAK-like) kinase EMBV3_34929 TCCGAAGGACACACCATGACAACTGGCAAGAACACAAACAGCAATTCACTGACGACCAGC Gene GeneID:528142|PSME4:XM_002691325:472_cdna UTR3_Alt 2 NULL GeneID:528142 11 GENE PSME4 NULL proteasome (prosome, macropain) activator subunit 4 EMBV3_15253 TGGTGCTTTGATGATAAGGTCAGTTGGCTGCAGTTATGTGAAGGGTGGACCTTTGGGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02691 CGACTGGCAGAACTGCTCCCTCAAGTTCAGAGAACGGGGAATGGGAGATAGTGCACCGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18309 AGGTCCTCCATCAAGTGTTCATCTCCGACTGCGACTCCAGCAAAATGACTCAAAAGTGGG Gene GeneID:524529|GALNT7:XM_002689455:50_cdna Constitutive 0 NULL GeneID:524529 8 GENE GALNT7 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7) EMBV3_21505 CCCGCCCATACCCCTTCCACACCACTTCCAACCTCATAGGAGCCAATGTATTTATTTTCC Gene GeneID:512898|DDA1:NM_001015583:62_cdna Constitutive 0 NULL GeneID:512898 7 GENE DDA1 MGC143143 PCIA1 DET1 and DDB1 associated 1 EMBV3_02087 TGAGGGAGCATCTCCTCTGTCAGAGCGGCGGTTGGGGTCGCCACCGGCCTTCCTGGAACT Gene BVV0102_430817 + 0 NULL GK000030.2:92013215-92015985 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24422 CATCAGAGGAGCCCCACACTGAAAAGGGAACTGAAACAGCTCATCACGGCAGCCAAGTTT Gene GeneID:522045|SMARCC1:XM_002707780:629_cdna Constitutive 0 NULL GeneID:522045 22 GENE SMARCC1 NULL SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 EMBV3_16115 GGAGCCGTCGTCTGTGAAATCTGGAGGAAGTTGTAGTCCGCTTCTCACTTCGGGTTTCTA Gene BVT0102_324057 + 0 NULL GK000022.2:56533156-56699825 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10213 CACTCACAAGGCTTCAACAAACTGGCAGAGGTGTTTCCTGAACGTCTGTTTTGCTTACAC Variant GeneID:523264|DHDDS:NM_001035346:191_cdna 263^522 1 EMBV3_35699 GeneID:523264 2 GENE DHDDS NULL dehydrodolichyl diphosphate synthase EMBV3_04932 CCACTGTGTGACGGCTTTGGCACCCGAACACTGATGGTTCAGACATTTTCCCATTGTATC Gene GeneID:540874|DEPDC1B:XM_002696314:35_cdna Constitutive 0 NULL GeneID:540874 20 GENE DEPDC1B NULL DEP domain containing 1B EMBV3_14329 GGGATTGTCTACACAGGAAGCTGGAAAGATGACAAGATGAATGGTTTTGGAAGACTTGAG Gene GeneID:616607|MORN2:NM_001076428:173_cdna Constitutive 2 NULL GeneID:616607 11 GENE MORN2 MGC133493 MORN repeat containing 2 EMBV3_04851 CTCTACTGGCAGATAACTGTGGATCGCATCTCCGTGAATGGGAAGGTGATTGGTTGTTCC Gene GeneID:528815|LOC528815:XM_002699308:301_cdna Constitutive 0 NULL GeneID:528815 29 GENE LOC528815 NULL similar to pregnancy-associated glycoprotein 6 EMBV3_24954 TCCCGACCCGGCTCTCCAGAGAGAGAGGTGAAACGGAAGGTGGAGGTGGTTTCACCAGCA Variant GeneID:505619|KAT5:XM_002699348:230_cdna 286^441 2 EMBV3_07702 GeneID:505619 29 GENE KAT5 HTATIP K(lysine) acetyltransferase 5 EMBV3_28765 GGCAACAGATTTCCTGCATTTCAAAACTTCTACCCCCATGCCAATGATGCCCCCTTGAAG Gene GeneID:535917|CA10:NM_001079609:2_cdna UTR3_Alt 2 NULL GeneID:535917 19 GENE CA10 NULL carbonic anhydrase X EMBV3_18722 GAACAGAAGGCTGGGCCATCAGGGAAGGAAAGCCAGGACATCAAAGGAGACTGACAAGAT Gene GeneID:613288|WNT11:NM_001082456:50_cdna Constitutive 0 NULL GeneID:613288 15 GENE WNT11 MGC148950 wingless-type MMTV integration site family, member 11 EMBV3_05217 GGTAGCGCCGGGTCCCAGTTACTGGTCCACCAGGGAATTATTGATCTCATGTCAATTTAG Gene BVT0101_064349 - 1 EMBV3_28416 GK000018.2:61145923-61185953 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19284 CCTTCTCAGATTCTCTTCCATTATAGATTATTACGAGTTACTGAATATAGTTCCCTATAC Gene BVV0101_050967 - 1 EMBV3_12510 GK000026.2:35437040-35576491 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00154035 1 XLOC_093796 NonCoding TCONS_00154035 XLOC_093796 NonCoding NonCoding - 26:35487335-35488360 - TSS115205 1025 1 TCONS_00154035_1 40 0.410731707317073 1 0 0 0 0 0 0 0 0 0 0 0 0 3.48847252484547e-06 0 0 0 0 0 0.000587492657593552 0 0 0 0 0 1.63557410448791e-05 0 0 0 0 0 0 XM_005227870.1 TMEM164 PREDICTED: Bos taurus transmembrane protein 164 (TMEM164), 8e-91 338 95.71 0.20390243902439 0 noncoding 0 0 0 0 -0.0256533125128167 0.847582060757125 0.000383136756600941 0.995938135427261 CCACCAGGCTCTCCCGTCCCTGGGATTCTCCAGGCAAGAACACCGGAGTGGGTTGCCATTTCCTTCTCCAATGCATCAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCGGACCCTCAGCGACCCCGTGGACTGCAGCCTTCCAGGCTCCTCCATCCATGGGATTTTCCAGGCAGGAGTACTGGAGTGGGGTGCCATTGCCTTCTATACATATATAAAATAGATAGCCAACAAGGACTTACTGTATAGTATAGGGAACTATATTCAGTAACTCGTAATAATCTATAATGGAAGAGAATCTGAAAAGGAAATTATATGTATGTATATTTATACAACATTGTAAATAACTATACTTCAATTTTAAAAATTAAAAATAAAAATAAAAAATACATTTTTTAAAAGGTGCCATTATAGCCATTCATTCTGGGTAACAGATACATGGGTTTTCATACTACCATTTTATCCACTTTTGTAGATAGTAAAATAGTTTACTAAAAAAATTAAGTTGCACAATCTTTTGATTTTACTAAAAACAACTAAAATGTTCACTTTAAAAAGGTAAATTTTACGGTATGTGAATTATATCCCAATAAGATAAAAATGCAACCATTATGCTTTCCAAATTGGAGATGGAAGAAATTTGAAACAGCTAGGGAAACAGTCATTTGTTCAAAGCCAAATAATATGTCCTTGGAAAAATGCACAAATGTGGGCAAAAGCTAATGCAGCAGTTTATCCCCTCCAGTCATTAAATTAAAGACAGAATAATTACAAAATCCTTTTATTCTCTTGGCTTAAGGAGGGAAATGGCAGAGGAAATAGCCAACAGCTTTTGATGACTTTACATGAATAGATATGGGTCTTCTTTAGTCCAATTACCCTTTACTAGCTGTGTTTTACCTCAAAACTGAAAAGGGAAAAAAAATGACAATTTCAAGCATAAACTCTGAGCTGGATCTATAAGGGACAGAAACTGAAGCACAGCTGGGAGAATGAGGATTTCTGGATGACAAAGGAAAGG TCONS_00150926 . 5' 87978 TCONS_00150926 . 5' 87978 EMBV3_12228 GCCCAAGTCAGATATTTTAAGCCAGCTAACTCAGCTGCCAGCTCCATTCACCCTCTTTCC Gene BVT0102_292282 + 1 EMBV3_04621 GK000004.2:34021298-34143541 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19885 TTTGGAGGTACCACACTGGTGATGAAAACCAAGGCTCGCTTGCTGGGCAGTGCAATGGCT Gene GeneID:616957|APOL6:XM_002687677:67_cdna Constitutive 0 NULL GeneID:616957 5 GENE APOL6 NULL apolipoprotein L, 6 EMBV3_38153 TGAGCACATCTCGCTGCGCCACTCCTAATATCAGTCCAGCAACTTCTGTGGTTCAGCATA Gene GeneID:505221|KCTD3:XM_002693941:14_cdna UTR3_Alt 2 NULL GeneID:505221 16 GENE KCTD3 NULL potassium channel tetramerisation domain containing 3 EMBV3_21392 TCCACCGCTATACTCGTTTCAAGAGGCGGCATTTTCTCAATTAGCTGTTTTCCTTGGACC Gene BVT0101_022436 + 0 NULL GK000004.2:57589345-57782691 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09467 TCATAAGTGCTCTGTGTGTGGAACCCTGTACTCACGACCTTGTTGGCTTTGATTTGCATG Gene GeneID:530146|SLC44A5:XM_002686280:121_cdna Constitutive 0 NULL GeneID:530146 3 GENE SLC44A5 NULL solute carrier family 44, member 5 EMBV3_06436 ACTCAGGGAATGTCACCGTCTCCCTCTTCTACCGCAACGACTCTGCTGGTCTGCCTTTGA Gene GeneID:788015|ACPT:XM_002695134:657_cdna Constitutive 0 NULL GeneID:788015 18 GENE ACPT NULL acid phosphatase, testicular EMBV3_14194 TTTGAGATTCTTCCGAACCCAGGATGCCAGCGTCTGCCAATGACCCTGTCCTTCATCTCT Gene BVT0102_241604 + 0 NULL GK000011.2:106831644-106855930 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00029501 1 XLOC_015775 Coding TCONS_00029501 XLOC_015775 Coding Coding LOC100337023 11:106854042-106879019 = TSS20508 3945 1 TCONS_00029501_1 500 16 0.842688981422165 8.6221052925955e-07 1.44337542427531e-06 0 3.68371849682239e-06 2.21445877704153e-06 4.82834358777229e-06 7.48034384804691e-06 9.0391956018984e-06 4.65435757686153e-05 2.9861874895486e-05 3.9474157077537e-06 7.88664329732168e-05 6.08524759558163e-06 3.16182911023469e-05 1.80876238061775e-05 0.000242134178037589 1.3366788130197e-05 2.07358010922304e-05 2.51451274170833e-06 2.7799518387352e-06 1.00036867414356e-06 1.83191638346881e-05 6.33049246054819e-06 0.000186214659392117 2.39047386964256e-06 8.92961032215447e-08 1.48520909042906e-06 9.73908766698516e-07 4.59926406139008e-05 1.2281830216073e-05 XR_236599.1 LOC100848491 PREDICTED: Bos taurus collagen alpha-1(V) chain-like (LOC100848491), misc_RNA. 0.0 6915 100.00 0.971609632446134 NM_000093.4 COL5A1 Homo sapiens collagen, type V, alpha 1 (COL5A1), transcript variant 0.0 2347 81.25 0.603295310519645 TCONS_00029501_1 sp|P20908|CO5A1_HUMAN CO5A1_HUMAN Collagen alpha-1(V) chain; 0.0 715 96.78 0.868 2 coding 0 0 0 0 -0.514880421418432 0.219658542489637 -0.00179152665722666 0.972343128653345 ATGGTGAACCCGGGCAAACGAAGGGGTGCCGGCCGGCTTGCTGGGAACCCTCCCCAGATGCAGCAGAGCCGCAGGTGGGATGGGCCCCCACACTGGTGCAGCCTGAGGGGATCACCAGGCCCTACGGGTGAGCCAGGCCCATCTGGGCCTCCAGGAAAAAGGGGTCCGCCCGGCCCCGCAGGTCCCGAAGGCAGGCAGGGGGAGAAAGGAGCCAAGGGAGAAGCCGGCTTGGAAGGCCCTCCTGGGAAGACTGGCCCCATTGGCCCCCAGGGGGCCCCCGGGAAGCCGGGGCCCGACGGCCTTCGAGGGATCCCGGGCCCAGTGGGTGAACAAGGTCTCCCCGGAGCCCCGGGCCCTGATGGCCCCCCAGGACCCATGGGCCCCCCAGGACTCCCCGGCCTCAAAGGAGACTCTGGACCCAAAGGAGAGAAGGGTCACCCAGGCTTGATCGGCCTCATCGGACCTCCGGGCGAACAGGGAGAAAAGGGTGACCGCGGAGTCCCCGGCCCCCAGGGCTCCTCGGGCCCTAAGGGAGAACAGGGTATCACCGGTCCTTCCGGCCCGATTGGCCCCCCGGGTCCCCCCGGCCTGCCGGGGCCCCCTGGTCCAAAAGGCGCTAAGGGCTCCTCGGGTCCCACTGGCCCGAAGGGTGAGGCAGGCCAGCCAGGACCCCCTGGCCCACCAGGCCCCCCAGGCGAGGTCATCCAGCCCCTGCCGATCCAGGCATCCAGGACCCGGCGGAATATCGATGCCAGCCAGCTGATGGACGACGCAGAGGGCGAGCAGTACATGGACTATGCGGATGGCATGGAGGAGATCTTCGGCTCGCTCAACTCCCTGAAGCTGGAGATCGAGCAGATGAAGCGGCCGCTGGGCACACCGCAGAACCCCGCACGCACCTGCAAAGACCTCCAGCTCTGCCACCCCGACTTCCCTGACGGCGAATACTGGGTGGATCCGAACCAAGGCTGCTCCCGGGACTCCTTCAAGGTCTACTGCAACTTCACGGCCGGGGGGTCAACGTGCGTCTTCCCCGACAAGAAGTCTGAAGGGGCCAGAATCACTTCTTGGCCCAAAGAAAACCCGGGTTCCTGGTTCAGTGAATTCAAGCGTGGCAAACTGCTCTCCTATGTGGACGCCGAGGGCAACCCCGTGGGCGTCGTCCAGATGACCTTCCTGCGGCTGCTCAGCGCCTCCGCCCACCAGAACATCACCTACAACTGCTACCAGTCGGTGGCCTGGCAGGACGCCGCCACGGGCAGCTATGACAAGGCCATGCGCTTCCTGGGCTCCAACGACGAGGAGATGTCATATGACAACAGCCCCTACATCCGCGCCCTGGTGGACGGCTGCGCCACGAAGAAAGGGTATCAGAAGACGGTTCTGGAGATCGACACGCCCAAGGTGGAGCAGGTGCCCATCGTCGACATCATGTTCAACGACTTCGGTGAAGCGTCACAGAAATTTGGATTTGAAGTGGGGCCGGCTTGCTTCCTGGGCTAGGAGCCGCGAGCCCGGCCCCAAGAGCAACCTTGTGACCTCAGCGCGCCGCCTGCGGGCGTCCGGACAGTGAGGGCCCCTTGCCCTTCCCACGGCGCCGGGCCGCCCCGCACGAGAGCAAAGGGAAAGAGCCGCGTCCGCGCCCCCACCCCGGAGCCGAATCACATGACCTAGACGCCCCGCAGCCGCCTGCTTCCGGCAGCCCCGTCCCGGCCACGCCGCACTCCCTGGGAAGGGAGCGGGGCCCCCCCACCGAGCCCGTGGATGGTCTTCACGGAGAAGGGTAGGGCTGCCGTATTTGGAGATCAAGCCTTTTTAAAAAAAAAAAAAATTCAACTTGAAGATGCGTATTGTCCCCTGACCTTCAAACCTTGTTCCGAGGCCAGCCTTGTAAAGGTCACCCCACCCTCCAGAGCCTCCGTTTTTAACAAGATCCATTCACAGGCCAAATGCCATCCTGTGTGTGCCTTTGCGATGGATTAAAGGTGCTTCTGTTTCTGTGAGTTTTAAGTAAATATTTGTATTGTATTGTCATGCATGTTCAGTGTCCCTGACTTTCAATCATGCCTGTGAACCCCGCTGCAGTCCCACTGGGAGAGTTGGAAAAACGGCCGGGGCGTGTGTGCCGGGAGGCAGTCCACACCCCCGCCCTCTCCAGGACGTGTGATGAATTGGGAACTTGCCAAAGGCAGAGAGCGTTCACCGTACCATTCACAAAGCAGGTGGCCGTGCCCCTTTCAGATAGGCCTTTGATTAGCTCTGGATTTTTTTTTAAACAGGGAGAAAAAGGAAAAAGGATTTTACACTCTGTCTTCTCCACATGCACTTAGATGAAAACGCAGGCTTAAATTAATTTTAATTGCTTCCTTTTTCCATGTTTCTTCCTGCAGAGCCTGATGGGAGAATGTCCAGGGCAGGGAAACCGCATTTTCTGTCGATGATAATTCAGTGAAAATTGGTGCTTATGTTTACACTCCTCTTGTGGTGCTACGTGTTAAGATCTCCTTAAGGTGGCCCTGGGGCTGCCTGCTGGGCCTCGTTCCCCATCCCCATCTCTCTCCCTCCTGGCTCTCGCCGCCACCATCTAGATTTTTGCCACCTGCCCTCCCGTGGCCCTGCCCTCCTCCCAGACAGCAGCGATGCCGCTCCAGGCGGGGTACCACTCTTAGGCTGTGCGTCTGTGATCCGAAGACACACACACACAATATGCGGACGCCTCCCACAGTGTAACGATGGCAGATTGTATTCAGTTGCCGAATGTTTGTGGTGCTAATTTCTGCATTGTTTTTGTTTTTTTTTTTTTTTTTGCAAGAACTGAATTGAGGCAGCACGTGGCCTTCAGCGGGGCTGCCCTCCGTGTGGCCTCGGCAGACAGACAAATGTGCAATGAACTCTGTGAGTCCCGCCGGGGCCGCCAGCTGTGCCTCATCCCCACGAAAGCAATTTGGATTTCCGTCTGCGAATGTGCTGGGCGTGGGTCTCGGGTGCTCGGGTGCTCTGGCCAGCCAGGCTCCATCCAGTACCGGTCCTCCTCACCGCGCGAGGGCAAGGACTTGCTGGGCTGGCAGGAAAGGTGATTCCTTTACTGTGAAAAGCTGCCCTTGTGCAATGCCCTTTCCTGCCAGGATGGGAGAAGCGAGACGGGCCCTGGGGCCCTGTGCAGCCCCCTCAGGAGGAGTTGTGGGTCCCGGCCCTGGTGCTGTTCTCCGCCCACCCTGCCCCATCGGACCGCGGTTCCAGCTTAGGAAACCACAGCGGAGCAACCCAGGAGTCGCCCCCCACCACCACCACGAGGATTTCCCGAATCCCCTGGAAATTGAGTCTTGCTCTTGCCAAAGAAAAGTCTGGCTTTGAGATTCTTCCGAACCCAGGATGCCAGCGTCTGCCAATGACCCTGTCCTTCATCTCTTCGATAGAAAAGCCATATCGGATCGTTGCCACGGGGCGCCCTGTGGGTGTTGTCTAGGTCATGTGATTCCATTTCGATTTCTCATCCCACCAAGTTCTCCTCTCATTCTGTCAATCTCTCCTCCATTGGTCCCTTCAAAGCTGTTGCAATTTGTACTGAGTCAAAACGTGTCCCATTCTCCCCAGACCACTTAGCTATGATATATTGCAATAAAATTACTTCTTATATTTGCAGAAATTCTTTCGGTGTAATTTTATTTTTTTCCCTCATCTATATAATTGGACAGATGTTGATTGAAGAGAAAAGGAAAATGGTCAAAAGAAAACCTATAGTAAATATTCTAGGACATCAGGCCCTTTCAAATAGAATGTCAAGCGACATATTGTACATTTCCCGAAAACCCAATAGACGTGTTCATACGTTTCCACTGTAATGCCCAGGAAAGAGTATTTTAAAATATTTTAAACCTGTGTAACAGAGGAATAATTGTAATAGTTTTTCAATAAATCAAGATGACTGTTTCCACCGTAAACAGA EMBV3_42950 GCCCTCTTGTAAGTTCAAAATGTTCCTGTTGCTCAGAATCTCCAATATGATAGCTGTGAG Gene GeneID:511292|POT1:XM_002686916:142_cdna Constitutive 2 NULL GeneID:511292 4 GENE POT1 NULL POT1 protection of telomeres 1 homolog (S. pombe) EMBV3_39865 GAAACTCCTCTGGACCCCAAGCTTAGAAAGGCATATGGCTACACATTCACCCCAGAAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34857 CTGGAGTCTTATAGGGGTCGCGATCGCCTGGAGGAGGATGTGTTTGTCCGCTGTGTGTCT Variant GeneID:506518|PEX11G:XM_002688851:189_cdna 97^285 1 EMBV3_41650 GeneID:506518 7 GENE PEX11G NULL peroxisomal biogenesis factor 11 gamma EMBV3_43249 CTTTCTCAGCAATTTAAGCAATGGTTGTGAATACTTCGCAAAGCTGTAAAGACTATTGTC Gene BVT0102_288406 - 1 EMBV3_36736 GK000011.2:30557225-30596744 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024585 TCONS_00024587 TCONS_00024586 TCONS_00024589 1 XLOC_014538 Coding TCONS_00024587 XLOC_014538 Coding Coding FOXN2 11:30502068-30561035 j TSS18003 5595 1 TCONS_00024587_4 439 0.0371760500446828 6 0.905216565478411 6.5320146461538e-05 4.43885697608956e-11 3.36676668549945e-11 6.73144496154065e-08 2.42482521082652e-05 3.50797031018714e-09 5.7748979544036e-10 0.000229683986272752 4.32318673606283e-08 0.000221881623814391 6.23571289329535e-05 0.000208747818074031 5.44363615997681e-05 6.81409600241607e-05 6.94527985427762e-05 7.20074914855913e-05 0.00173681295493842 0.00220631530331968 1.00960289059656e-08 1.28716503756006e-14 4.38781746523997e-11 0.00103516612279987 3.11908297804883e-14 0.00195559414015754 4.06919374019053e-20 2.93556813523845e-26 1.31551503190815e-10 5.78858597341868e-09 8.49841309971242e-05 0.000155046827198197 XM_005192437.1 FOXN2 PREDICTED: Bos taurus forkhead box N2 (FOXN2), transcript variant 0.0 3222 100.00 0.319034852546917 XM_005264282.1 FOXN2 PREDICTED: Homo sapiens forkhead box N2 (FOXN2), transcript variant 0.0 3218 80.79 0.604825737265416 TCONS_00024587_4 sp|P32314|FOXN2_HUMAN FOXN2_HUMAN Forkhead box protein N2; 0.0 806 91.34 0.997722095671982 1 coding 0 0 0 0 -0.0595317205964326 0.72030475864131 -0.0353150753926273 0.562423940449733 GGGGAGGAAGCGAACGGGAGGGGGATGTGGTACTGCTGCGGCCGCCACCGCAGCTGCCGCTGCCTGCTCGGGGCCGCGTCTTCCCGGAGGCGGCTACTGGAAGCGGCCGAGAGCAGCTGTGGTGCTCTGCCATATTGTGTCTTCCCCTACCCATCCCTCGCCCCTCCGCTGCGGCGGCCGAGCTGACGAACTGTAAGAGTAAATGGGTCCAGTAATTGGAATGACTCCAGAAAAGAGAGCTGAAACTCCAGGAGCTGAAAAGGTTGCAGGATTGAGCCAGATTTACAAAATGGGAAGCTTGCCTGAAGCTGTTGATGCTGCCAGGCCAAAGGCCACTCTAGTGGACAATGAGTCAGCAGATGATGAACTCACAAACTTGAACTGGCTTCACGAAAGTACTAATCTCCTAACAAACTTCAGCTTTGGAAGCGAAGGTCTTCCAATTGTTAGTCCATTGTATGACATAGAAGGAGATGATGTGCCATCCTTTGGACCGTCGTGCTATCAGAGCCAAGAAAAAAAATCAGCAACTTCAAAGCCCCCATACTCCTTTAGTCTTCTCATTTATATGGCTATTGAACACTCTCCAAATAAGTGTTTGCCAGTCAAAGAAATTTATAGCTGGATTCTGAACCGCTTCCCATATTTTGCAACTGCACCAACTGGCTGGAAGAATTCTGTTCGACATAATCTGTCCCTGAATAAATGTTTTCAGAAAGTGGAAAGAAGCCACGGCAAGGTTAATGGAAAAGGTTCCTTATGGTGTGTTGATCCAGAATATAAACCCAACCTTATGCAGGCACTGAAGAAGCAACCTTTCTCCTCAAAATCCACATTTTACAGCCCTCCTGCATCACCACAAAGTGGTTCTTTATCACCTCATTACTTAAGCTCTGTACTCAAGCAGAACCAGGTGCGAACTCTCAAAGAATCTGATATTGATGCTGCCACTGCAATGATGCTTTTAAATACTTCTATAGAACAAGGAATTTTGGAATGTGAGAAGCCTCTGCCTCTTAAAACAGCAATGCAAAAAAAGAGGAGTTATAGCAATGCATTCAATCATTCCAGTGCTATGCGATTACATGAGAGTGATTCTTTAGCCACCAGCATTGACCCAAAAGAAGACCACAATTACAGTGCAAGTAGCATGGCAGCACAGCGTTGTGCGTCCAGATCTAGTGTGTCTTCTCTGTCTTCTGTGGATGAGGTGTATGAATTTATCCCAAAGAGTAGCCATGTAGGAAGTGATGGCAGTGAAGGATTTCGCAGTGAAGAAGACACAGACGTTGATTATGAAGATGATCCACTTGGAGACAGTGGCTATGCATCGCAGGCTTGTGCAGATACCACTGAAAAGGGGCAGCCAGACAAAAAGATGCGAAAACAAGCATGTCAAGAAATTGATGAGGAGCTCAAAGAGGCAGCTGGATCTCTGCTTCACCTTGCTGGTATTCGTACATGTCTAGGTTCTCTAATAAGTACTGCAAAGACACAGAATCAAAAGCAGCGGAAAAAATAGAAATACTTACTAGTGTGAAATTATTTTTAAATGTGGCAATACTCTTCTACTTAATTCTTTACAAGGGATATCAAAGCCATAATGGACTTCTTTTGGTTTAGGGTGGGGGAGGGGTGCTAATTGTTTATTTCAAAATATTTTTGTTTTTTGAATTTTTATTAAATAGTTGCTGTTAGGATCATGCCCAATCATCAATATGATGTGAAATCCTAAATGCATAATTTTTGTGATAAGTGTCTTCAAGATTGGAAATTTTATGTTTAAAAAAAAAAAAAAAAGTCCCAAGCCTCTGTCTTAAACTTGTAGGGAAGTCTTTTGTTCTGTTAATATGTCCAAGTGTAAGAACTGGCAACTCTAACTTTTTTTTCATTTTCTTTTCCTATCTGTAATTAACTATAGTTGCCGATCCAGCTAGAAATTTTGCTGCTTTCTTTCTCCCATACTCCTCTCTTGACACGTGTAATCCAGTAGGATGAGATTTGAATATTTTATTTTGTCTTAATTTTTGTTTTTAATTATTTTTTGTTGACACATGAACAAAGTTGAATGTAAGTTCGAAAAGATCCTAAATGTCCAGAAAGTTCCTTTTGCATAATCGGCAAAGAGATAGCAAAAAGTTCTAAGATTTAGAAAAGGCAATTTTGTGATGTAATTTATTCTAAGAACTTCAGTTTGTTACAATATTATTTTTTTCAAATTTTTTAACTTCCGAGATATTCCATAGTGTTGATTGGAGCCATTTATTGCAGCCAAAGTGCTTTGCAACCATTATTTTGATTTTAGCCACTAGCTGTCTTTGCTGAGGAGAAAGTATCCAATGAAAGGATATAGCCATGGAGTCCCATTTAGGCACACTTTTGCAATAAGAGGATCTTTCATTGGCTTGTTAAATGTACTGCATTCTGAAAATTACATGAATGGAGTGTAATCTAATATAAACATTTGAATATGTGTTATTTATGTCATCATAAATAAAGGTAGATCATTTAGGAAAAAACTTCTATTCAAGCTTTGTATGAATTAAATTGTATGTGCACCCAATTAAGTTAAAGGATTTAACAAAATTATAGAGACAAAATGCCTTCATGAATTTTAAAATTTGTATAAAATTTTATAAATCCTTTTAAGGAGGCAGTGTAATTACGTGCCATTAAATCCATCCTAAAAGATTTTGTTACTCTTCCAAATGTGTATTGCCCAAGGCCTTTTTCAGTATTTGAACAAATCTGCTTATATGATACACATTTTTTCATATCATTTGTATAGCTTGACTATATCATTCAAAAAGGACAAAGGATACTAATAAAGTTAAACTTATTCATAATGTATTTTTTACAATGGCAAAAGCAGCTTTCTAAAAGTTCAGTCTTAGCTCATGCTGCATCTTGTTTCATAGACAATGACCTTGTTTTTATTTTCTGATGATTTCATATATACATATACACATAAGCTTATGATTTTGGTTTGTTACTTTCAGCTGTTTCGATGATGATAAAGCATTTAAAAAAAAAAGACATTTTTCTTTTAACTTGTAGAGTTTATTTGAGCAAAACTGTCAAATGAGAAGCCTAATGAAAATGTCTTTTTCAGTTGTCAAGACATTAAGCCAGGGATAACAACTTTATCTGTCCTGTTTCCATGTTAACTGTAGTTGAACCTGGATAGCCACAATGATAGAATTGCTGCTGTTGAAAATAATAATCTTCCAATTTGTTGATAATATGTATGCAGGATGAGGTATTGAATTTTTTGTTCTTCATATGTATCACATCTGCTGCATAAAATTGCTAACCTAAGTTAACATCTTTTACTATACACAGTGAATATAACACCAAAAATTGTTAAATTGTTTTATCACAGTATAAATAGTACACGGGGCTTCCCTGGTGGCTCAGTGGTAAAGAATCTGCCTTCTATGCAGGAGGCCCAGCTTCACTCCCTGGGTTGGGAAAATCCTTTGGAGAAGGGAATGACTACCCACTCCATTATTTTTGCCTGGGTAATTCTATGGACAGAAGAGCCCGGTGGGCTACAGCCCATGGGGTTGCAGAGTCAAATACGACTGAGAGACTAGCACACAGACACATACACATACACACAAATAGTACACAGATTATAAAAATCATTTAATAACAAAATATTTTTAAGCTGTTTACTGTGGTCCTCTGGATAGACCTTATTAACAGTGTTTTAATGATCTGGTTCCAATTTATTTTGTTAACTGAAATTCTGTACTACAAATGTTCTCTCTGGTTCTTGTCCATTAGATCATTAGTCTTTGTAAGTAAAGGAAAATGATCTAAGATATAAGGAAGGGAGAAAGTCATTCTCAGTTCAAATAAAGATCTTTAAAGTTATTTTTGTCAATATAAATAGCAATAACTTTTAAACTTGATTTTCTTTCCCTCTTCATGTACTCTTACCACAAATTTAAAAGTTATATTCATCACTAGCAAAGTCAATGAACTTTCACACTAAATGCTAACAGGAATAAGTTACAGGATGCTTTATTGAATTCTTATATAGAATTCACTGTATCACTTTCCATGTGCTGACTTACCCAGGCAGTTATTTTTAAGGGGAAGAACCTTTTTAATTACCATCCCCCTTAATTACTTCCATAGACATAATCCTATTCCTCAGGTGTATTGAGATAAAAACATGGCTAATAACCACCCAATTAAGGGAAGTCATATCTAGTCCTATGGACTGGAAATTGTATTTCTAAGAATATATTACTAGCAAATTTTACTGTAATAAAAAACAACTTGGAAATCCTGGAAAGGTTCTGTCTTTTAAAATTGTGACTTAAGCTAACGTATAATTTGCCTTGCATCAATATAAATTGTTAACAGCCAATCTCAGTTTATGACAGATCCCTAGTAGAAGTTTTAACAATTTATCTTCATCTTTCCCATCCCAAATAGAATCAGTGTTTCATGAATATATATTTTTGAAATTTATTTGTGCAATATATAACTCAATTAGTTCATGTTTTATTTTACTTTTCAAATTCAGAGAAAGAAAATATTACATGGAAAATGAATTGATGGATCACCTCCTTTTTGCCACCCTTGAGCCTTTCCTATCCTTATAACCAACATGGCGTCTCTTAACTTTGATTTCTTTGTATATAGTAAAGTTTAGAATATACATGTTTCTTTCTTTTCCTATTCTCTGAGGCATTGTGTAAAGGATCATACTAGGTGGTCAGTTAAATATATGTTAGCACAAATTCAAAGCTAGAGAAAAGTGTTAAGCGGGGAGTGTGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTGGTAGACCAGGAGGCCTTTCTCAGCAATTTAAGCAATGGTTGTGAATACTTCACAAAGCTGTAAAGACTATTGTCTTAAATACTACAGTAGCTTAACAACCTTTTGTGAAGACCATAGCATTTAATTAAGAAACTTTGAGGCTTTCTGGTTTACATATATATATATTATAGGTTTTTTTTGGTTTGAAATGTTATATAGCTTTGATTTAAACAGTTTGCTTCAATATGTTAATGATGTCAGAATATTTATTTTCTGAAAAACAAAGTATTTTGATGTTATACCTGCCATTTTTTCTTAAATCACACAATTTTTTTTGCTTCTGACTGCCAGTGCCAATGTCAAAATTGTTGTACATTTCTTATTAAGTGCTTAATTTTAAAGTATTATGTTGCCATTAAATAGTGTATAAAAATGTGTAATTGCCAATTCATTGTAACTATTATTTATTTTTAAGTGAAAGTGTAAGAAGGTTTCTGATTTAAGAAATTTGAGTTATTAAATTGTGTCCTTATCCTTTTTTCTAATGTAGCATAAAAATCCCCCTGAGTTTGAGTTATAACTGCCAGTAAGTAGATGACAAGTCCACGTGAACCACTTCTTAGTTGCCAGTCTTTGCTCATATTAAAAACAACTTAACAAACGTTTAGTTTTTGTATCTAATCTCTGATTATTAAATTGTTTATAAAGTTTATTTTTACCAAAGAGATGCAATTCACTCTGATAAAGTATTACAGAATAAATGTTGTTTTATAACA EMBV3_40125 ATTCCAGAGATGAAGACCACATAGCCCACATCATAGAGCTGCTAGGCAGTATCCCAAGGC Gene GeneID:505945|SRPK2:XM_002686763:60_cdna UTR3_Alt 3 NULL GeneID:505945 4 GENE SRPK2 NULL SFRS protein kinase 2 EMBV3_23133 TCTGTATATTGTTCCCAAAGGGAGCCTCTATCGCCTGAAATCCCCAATACCCGCAAACGG Gene GeneID:536128|LOC536128:XM_002697367:366_cdna Constitutive 0 NULL GeneID:536128 23 GENE LOC536128 NULL similar to Notch homolog 4 (Drosophila) EMBV3_04890 AAGCATGGCCCAATATTAGCTCATCTTGGTAAACTATATTTATAGAGTATGGCAAAGCCC Gene BVV0102_391010 + 0 NULL GK000013.2:28117630-28132566 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08152 AGGTGAAGCCCTCTATGGTTACTGCAGCCTCAAGGATAAATGCACCAAGTTGCACGTGTG Gene GeneID:523239|ZC3HAV1L:XM_002687063:199_cdna Constitutive 0 NULL GeneID:523239 4 GENE ZC3HAV1L NULL zinc finger CCCH-type, antiviral 1-like EMBV3_03212 ATTCCTGAATGGGCTCACGTGGATTTCATCTGGGGTCTGGATGCTCCTCACCGTATGTAC Gene GeneID:517290|LIPM:XM_002698353:100_cdna Constitutive 0 NULL GeneID:517290 26 GENE LIPM NULL lipase, family member M EMBV3_05124 TTGACGATGAAGGGACACTTGGACCCCTGCCTCAGGTAGACGGTGTTCAGACACAACAGA Gene GeneID:506766|MAP7:NM_001101874:14_cdna UTR3_Alt 3 NULL GeneID:506766 9 GENE MAP7 MGC151537 microtubule-associated protein 7 EMBV3_32073 GTCTGCAATACAGGGTATAGCACTGAGTACTGCTGGAACCCAAAGTAGAAAATCTTAAGC Gene BVV0102_088464 + 0 NULL GK000006.2:89460196-89928465 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205716 TCONS_00205718 TCONS_00205719 TCONS_00205715 TCONS_00205722 TCONS_00205721 TCONS_00205713 TCONS_00205720 TCONS_00205714 TCONS_00205717 1 XLOC_124736 Coding TCONS_00205714 XLOC_124736 Coding Coding COX18 6:89920562-89932628 j TSS153560 2370 2 TCONS_00205714_1 130 4 0.803895565685868 2.44006674674937e-05 0.000115317808133229 1.32435274635249e-38 6.86217323198691e-104 2.74373226875224e-15 9.65952404016724e-12 2.44544822667113e-08 1.57584766432724e-14 1.72563991366211e-13 0.000115824342248552 9.76927462617678e-05 8.51192246111353e-05 6.50784964239337e-05 7.74005103758433e-05 4.20099390981384e-05 0.00020972559921019 2.4584682143453e-11 0.00080851443120903 7.13044553407217e-30 4.66456447154692e-28 5.76236997922792e-05 4.2794110480935e-96 0.0005326937841348 1.40353529892293e-10 3.54411657284821e-15 7.38481758443743e-05 1.79241279704572e-59 2.22285430898258e-48 7.05063804969791e-40 0.000347493340499909 NM_001082437.2 COX18 Bos taurus COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) (COX18), mRNA. 0.0 897 99.21 0.213924050632911 XM_005265679.1 COX18 PREDICTED: Homo sapiens COX18 cytochrome C oxidase assembly factor (COX18), transcript variant X1, mRNA. 1e-118 432 82.64 0.179746835443038 TCONS_00205714_2 sp|Q8N8Q8|COX18_HUMAN COX18_HUMAN Mitochondrial inner membrane protein COX18; 7e-51 167 84.04 0.894230769230769 1 coding 0 0 1 0 -0.0657398841647014 0.775553105000218 -0.00720065186575324 0.908482002286167 GAGCGGTGCGAGCGCGCGTGGTCTGTGAGGCCGGCGTTTCGGACCCAACTCTGGCGCGGAGATGCTGTGCCGGCTCAGCGTTAGGTGGCTGCGGCCCCGGCCTGCCCTGCAGGTCCGTGTCCTGGACCCATTGCTCGCACGGGCCCCAGCAGGCGGCGCCAAGAGCTCTGCTCTGCCAGTGTGGGCGGTGGCATCGGTCTCCGCAGTTGGCCTGAGCGGCGCGGGAGGCTGGTACGAGGCCTTGGCTACCTCGGCGCCGGTGCAGGGCGCAGAGGACGTGCTGCTCTTCGCCCACACCGCCTCGGGCCTGCCCTGGTGGGGCAGCATTCTCCTCACCACCGTGGTCCTGCGCGGGGCCGTCACACTACCCCTGGCTGCCTACCAGCACTACATCCTGGCCAAGCTAGGTGGAAAATTTGCAGCCAGAAATAAAAAACATTGCACGACATCTTAACCAAGAAGTTGCAGTTCGTGCACATCAGTTGGGATGGTCCAAGAGAGTTGCCAGATTTTTGCCCTGCAAAAACTTGGAAAGTCTCGTTTTCAGACGTACATTACACACTTTGTTCGTGCAGTCTCGGTGTTGATGATCCCAGTAGCGGCAACAGTGCCTTCATCAATTGTCCTCTACTGGTTGTGCTCCAGCTTCATGGGCCTTTCACAGAACTTGCTGCTCCGTTCTCCTGGGTTTCGCCAACTTTGCAGGATCCCGTTGACCAAGTTAGATTCAGACACTCCTTATAAGGACCTCTTGGCTGCCTTTCACTCCAAGTTCATTTCAAGAAAATCACGTACTTTCTAGTAATTTTTGAAACAATTACAGGTTTCACTGCTAATGTATTTAGAAGATTTAGAACTTCAGGTATGATTTAATTTGCTTTTGTTTAAAATCATGAACTCTGTGAAGTACTGTGGATTAAGATATAATCCAGATATATATAACAATACTTAAAATCTTTTCAGTGCTAAGCGTGTAGTATATTTAATTGTATGCTAAGACTGTAAAAGTGGAATCAAAGTGTCAGGCCCTGTTTATAAAATTACAACTTGCTAGAGATTCCAGAACTTTGGAGAACAGGACTAGAAAAGTTTATAAAATAAGAGAATCCAATGGGATGATTTCTAAAATTTGTAGGATGTGGAGGATCATAGACCTGTTTAATCTTTTAATAAAGCCCTGGTTTTCTCTTCAGAAAAGTCCTTGAAATACAAATGGAGGCCTTTTTTGAGCCCCTCTCCCAACTCCTGAAGGCCTTCTGGTAATTCCTGGTTAATAAATTATTCTAATGGAACAAGTTAATGTATGATTTTAAAATGAAAGGGACTTGAGATACATGCTGTGGAGTAGTCCACACATGTAAGAAAGTACATAACATGGTAGGTGGTGTTGCTTTTCAGCTGTGCTCTGAAAGAATATAAAAAGTGTACATTCCTTTCTTTCTAATTTAAGAAGTCTGCAATACAGGGTATAGCACTGAGTACTGCTGGAACCCAAAGTAGAAAATCTTAAGCTAATCATAAGAGAATATGAAGGAACTCAGTATCTCTGATAACCTGTTAAGTAAGTAAAAATTTTGTATTAGGGTCAAGATAATGCTAGTCGGAGATTTCTTTATACCTGTTCGTCTTGATGTGATAATACATAACATTAAGTTGGTCTGAGAATATCATATATTACCTAATTCATAATTACATAGCTTAAAAAAGAGCCAAATTTTAAAAGCTTGAATGATCAGGATAGTATTTATCAAGTTTTAATAATTACTGAATACATGAAAATACATTAGTTTCAGTGTTACTAGAAATTAAACAGTACGTGAAGAATCAGCTTATTCAGCCAGAAAGCATGCATATGAACAGCATGTCTTCAGTCATTAGAGATGTAATCGTTGATCACATGATTGTGAAATAGGATTGTTTTGTAGAATTCTGGAGATGGAGTTGAGTCTTTTCTGTAATCTCAGAGTACAGTAGACCCTTCTCTTTTGTGGTCCCAAAGCCACAACCACTAAGAGCTTTAAACTGTCAGCAGCTGGAATCCCAACAAACAGCTGGATCAAACTTCATTAACTGAGAACTTACATAGCCATGGGGAGGAAATGATTCCATGATTCCTGTACATAATAACTGGCCTGCCATCATTTGTGGAATACAGTCTAAAAATAAAAAGGACTATTAAAAATCTTTGAACTTTATTTGGTAATTGTATGGCCCTTGTGAGTATTGTGTTTCTGTTTTGGAACTCTTATTCTCAGATAAAGTAAAATGATATTTACTGGTATATTTGTTTTCTGTGGATGCTGTTAACAAAATCTTCATGCTGCTTATGCACCAAGAGGAAGATGCTGTTGAATAAATTGGATATTATAT EMBV3_17802 TGCAGGACATCAAGAAACCGGACCAGAACGACTGGAAGAGTGGGCTGAATGCAATGGAGT Gene GeneID:539838|FTMT:NM_001076190:26_cdna Constitutive 0 NULL GeneID:539838 7 GENE FTMT NULL ferritin mitochondrial EMBV3_19349 ACATGGATTCTGACTTGGGTTGTAAGGTCAAGGAAGGCCGCTCAGGAAGGGACACAAAAG Gene BVT0102_088555 + 0 NULL GK000030.2:5050948-5156932 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246195 1 XLOC_150929 Coding TCONS_00246195 XLOC_150929 NonCoding Coding - X:5115648-5118781 - TSS184646 1587 6 TCONS_00246195_3 54 0.559546313799622 3 0.494252873563218 1.883067493863e-14 0.000108355888059887 2.88273486022758e-05 1.02544843920227e-25 5.59982887545569e-05 1.03210031084008e-13 2.24602903424773e-20 5.96316508654009e-05 1.57439939138858e-05 7.9939051299201e-06 0 0 3.60733137762433e-19 0 0 0 0 0 1.30370646130054e-05 8.77478505276118e-05 2.46127476397658e-05 0 0 0 7.10894453555283e-06 5.18745483712712e-13 2.61828412599007e-05 0 0 0 XM_005193898.1 ANKRD57 PREDICTED: Bos taurus ankyrin repeat domain 57 (ANKRD57), mRNA. 7e-50 203 87.43 0.103969754253308 NM_001204265.1 NR3C1 Homo sapiens nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) (NR3C1), transcript variant 8, mRNA. 3e-35 154 72.88 0.182104599873976 0 noncoding GAAAGAATCCACCTGCAGTGCGGGAGACCTGGGTTTGATCCCTGGGTTGGAAAGGTCCCCTGGAGAAGGAAAAGGCCACCCACTCCAGTATTCTATCCTGGATAATTTCATGGACTGTATAGTCCATGTGGTAGCAAAGACTTGGACACGATTGAGTGACTTTCATTTCCCCACACTTGGATACATTAAAATATCTGAAAAAAGTCCACTAAAAGATATGGAAGACCGTTAAATGCATTATTACTAAGTGAAAGAAGCCCGTTTCAAAAGGGTACATGCTGAATGAGTCCATTTATATGCCATTGTGGGAAAGGCAGAAGTATGGAGACAGACCAAAAACAGAAAAAAGTTCAGTGGTTGCCAGGCAGAGGGAGGAGGGAGGAGTAGGAAGAACACAGAGGGTTTGCGAGGCAGTGAAAATACTCTGTTTGACAGTATAATGATGGATAGACGTCCTTAGTACATTTGTCCAAATCCATAGAAGGTACAACACCAAGGGTCCCCTGGTTACTTCTGCAAACTCCTTTGGAGCCTCTTTCCTCACTCCTGATATCTAGCCACTCCTGCACCTTTCTTAGATTCAGCATTTTGGCCCAGCAACTTTCATCCGGCTTAGGTATCCTTCAGGTTACGCTTTTGTGTCCCTTCCTGAGTGGCCTTCCTTGACCTTACAACCCAAGTCAGAATCCATGTATTCTCTCTCCTTGTACCACGTTCCTTACACTGACACATCACCATTTGTGTATTTATTGGTTTACTGTCTGGGTCCCTGGTTGGGAGGCAAATTCCATGACAGGAAGGAAAGCATCTGTCTTTCTCCCTGAGGTCTTCCCAGCACCTAGCCCAGGGCCCAAATGGAATAGGTGCTCAGTTGACACAGGTGGAATGAGTGAATAAAGGAGGTTTACTCACCCATTCTGTAGAGGTTGATGCTGTTATCTGAGTAGTGACGTACCTGATGCCACACAACTAGCAAGTGGACATGAATGGCATTGGCAAGCAGATTCTTTACCGCGGAGCTACCAGGGCAGCCCTAAATGGCCTTATGGATAGCCGAGAAATAAAGAACTTCCCTAGGAATGATATGGACCAAGTCAAAGAACATTAGAGCTGGAAGGAATTTTTGAAATTAAACCGCCTTCTTGTTATTACATATGCGGAATAGGAAGCCCAGAGAGGATAATGACAGAGCACCTGAGTGCAGTCGGTTTCCAGTCTGGAGCTCAAGCTGGAAGCAGGATCTCTCAGGGAAAAGGAGTAGTGTGATGTTTAAAGATTTTATTCTATTCTTTATTAGGTAATTGTTGTAGGAAAAGTTGGAAATTCATGTTTTCATTTACCTTGGATCCTATCACTTCAAAATGATCGTTGTTGTCTTCTGTGTAATTTTCCAGATATTTTCATATATGTAAATACTGGTAAAATGCTGTTTCAACTAAAATTGGATCATATTATCCATGCTTTTTGCAATATAGTTCCTACCAGATGCGTAAACCTGTTGGATGGAGGGACCTTCATTAATTTAATCAGTTGCTTATGATGAACAAGCTTTTTTCAAATGTTAAATTCTTTTAAAAGATGCTGCAC TCONS_00246191 s 5' 56205 TCONS_00246191 s 5' 56725 EMBV3_39581 ACAGCTCCACAGTCAGAGCAAGCTCAAAGCCCAGCTCCCATTCAAGTTCAAGGTCTGCAT Gene GeneID:532077|LOC532077:XM_002698818:20_cdna Constitutive 0 NULL GeneID:532077 28 GENE LOC532077 NULL similar to FLJ00185 protein EMBV3_31240 GTGCCTCCAAGTCAAGGGCCCAGGAGGGATCCGGCTACAACTTCTTCTCCCTTCGCTGGT Gene GeneID:539817|RTP2:XM_002684867:272_cdna Constitutive 0 NULL GeneID:539817 1 GENE RTP2 NULL receptor (chemosensory) transporter protein 2 EMBV3_35672 CGGCTGAGTGTGAGGAGACCCAGGAGACAGCCAGGACAACATGTGGCGCTGTCCCCGCCG Variant GeneID:515935|NAGPA:XM_002697955:659_cdna 683^920 1 EMBV3_05448 GeneID:515935 25 GENE NAGPA NULL N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase EMBV3_34084 CTGTGTCTTCCTATCTGCTCGGGGCCTTTGTCTAAGAGGGTGATCCCTATGTTGCCATCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17655 TCCCCAAGCTGAGAAGGGGCTTCATCTACGTGAGTACAACGTGCACATGGGCAGTGTTCG Variant GeneID:506380|KLK7:NM_001075256:142_cdna 61^342 1 EMBV3_43282 GeneID:506380 18 GENE KLK7 MGC151859 kallikrein-related peptidase 7 EMBV3_13331 GCCAAATGCACAACGCTGACTCATCACAAATGCGGGGCTGCTATTCGACAAACCAGTTTC Gene GeneID:404183|EED:NM_001040494:8_cdna Constitutive 1 NULL GeneID:404183 29 GENE EED MGC128486 embryonic ectoderm development EMBV3_37862 ATGCCATAAGACCGCCCTGGTTCCTTTGTGGACCCTCCTCTTTGAGGCTTGCATGCTTAA Gene GeneID:539060|SERBP1:NM_001046449:52_cdna Constitutive 1 NULL GeneID:539060 3 GENE SERBP1 MGC128417 SERPINE1 mRNA binding protein 1 EMBV3_12278 TGGTCCACAGCATCTGGGGTCTTCACTACGACAGATTCTTTCAAAATGGGACAAGAGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39441 TTCTCAGGCCTCTGGTACGTGGTCTCCATGGTCTCTGACTGCAAGGTCTTCTTGGGCAAG Gene GeneID:504893|LCN15:XM_002691708:72_cdna Constitutive 0 NULL GeneID:504893 11 GENE LCN15 NULL lipocalin 15 EMBV3_10096 TGGGTGCGTACACATCAAGGTGAAGAACTGAAGCTTTTAGGGTGACACTTGTTGACTGAG Gene BVV0102_291462 + 0 NULL GK000019.2:54171518-54221184 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094513 TCONS_00094512 TCONS_00094515 TCONS_00094516 1 XLOC_057471 Coding TCONS_00094515 XLOC_057471 Coding Coding USP36 19:54141196-54174465 j TSS70679 6435 2 TCONS_00094515_4 743 20 0.807172057232175 2.82694204969296e-07 0.000255725641104972 0.00175593212674001 0.00172566191699732 0.00317417985636919 0.00106516346400574 0.00152578396257232 0.00209085963608989 0.00320471128342664 5.93181724775325e-08 2.92518264812662e-09 2.11751767272837e-08 0.000726032382187983 0.000108729290624592 5.35835753111283e-07 9.25457452043699e-06 0.00196336373804922 4.98094504907752e-09 0.00132701799671264 0.00241647405301587 2.29301029781731e-08 6.67258661649084e-07 0.000484244599664034 0.000649340025022115 0.00105620772986565 0.00277967542368695 0.000550034005313207 1.57672385949882e-06 0.000104134891583405 0.000227319875426285 XM_580726.6 USP36 PREDICTED: Bos taurus ubiquitin specific peptidase 36 (USP36), 0.0 5903 99.94 0.509246309246309 XM_005257542.1 USP36 PREDICTED: Homo sapiens ubiquitin specific peptidase 36 (USP36), 0.0 1929 80.23 0.31981351981352 TCONS_00094515_4 sp|Q9P275|UBP36_HUMAN UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36; 0.0 1092 78.30 0.915208613728129 2 coding 1 0 1 1 -0.149042605122372 0.285140445123734 0.0380165133643147 0.576377519849518 CCGGATGGTGCGTGTGCGGGGCCCGTGCCGAGTAGACGCCAACGCCGCTGGCCTGTAGCCGGGCCGGCTGAGGGCCGGATTCTGCCACCCCTTCCGGACAACACGCTTGCAGCTCTGATGATTTAACGGGCCCAAAGCTGGGAAGCACGTGATTTTGAGGGCCCAGCACCCTGCCTACCTACTCCGGCCAAGCATCTGACCCCACGCTGCAGGAACAGCACTCCAGAGTTCAGACACCCCAGTGATGCACCATGCCCATTGTGGACAAGCTGAAGGAAGCCCTCAAGCCTGGCCGCAGGGATTCGGCTGACGATGGGGATCTGGGGAAGCTTTTGGCCGCCTCTGCCAAGAAGGTCCTTCTGCAGAAGCTGGAGTTTGAGCCGGCCAGCAAGAGTTTCTCCTACCAGCTGGAGTCACTGAAAAGCAAATATGTGCTGCTGAACCCCAGGACAGAGGGAGCCAGGTGCCACCGGAGCGGAGATGAACCACCGGCCCGGAGACAGGGCAGCGAGCACGCCTACGAGAGCTGCAGCGACGGGGTCCCCGCGCCCCAGAAGGTGCTCTTCCCGGTGGAGCGGCTGTCACTGCGCTGGGGGCGTGTGTACCGCGTGGGCGCTGGCCTGCACAACCTCGGCAACACCTGCTTCCTCAACTCCACCGTGCAGTGCTTGACCTACACGCCGCCCCTGGCCAACTACCTGCTCTCCAAGGAGCACACGCGGGGCTGTCACCAGGGCAGCTTCTGCATGCTGTGCGTCATGCAGAACCACATCATCCAGGCCTTCGCCAACAGTGGCAACGCCATCAAGCCCGTGTCCTTCATCCGGGACCTGCGAAAGATCGCCCGGCACTTCCGCTTTGGGAACCAGGAAGATGCACATGAGTTTCTGCGGTATACCATCGACGCCATGCAGAAGGCCTGCCTGAGCGGCTGTGCCAAGTTGGATCGTCAGACGCAGGCTACAACCCTGGTCCATCAGATTTTTGGAGGCTACCTCCGATCTCGGGTGAAGTGCTCCATGTGCAAGAGCGTCTCAGACACCTACGACCCCTACTTGGATGTGGCGCTGGAAATCCGGCAAGCTGCAAACATCGTGCGTGCTCTGGAACTTTTTGTGAAACCAGATGTCCTGAGCGGAGAGAATGCCTATATGTGTGCAAAATGCAAAAAGAAGGTTCCAGCCAGCAAGCGGTTCACCATCCACCGGACATCCAACGTCCTGACGCTCTCGCTCAAGCGCTTTGCCAACTTCAGTGGGGGGAAGATCACCAAGGATGTGGGCTACCCAGAGTTCCTGAACATCCGCCCGTACATGTCCCAGAGCAGTGGCGAGCCTGTCATGTACGGGCTGTATGCTGTCCTCGTCCACTCGGGCTACAGCTGCCATGCCGGGCACTATTACTGCTATGTGAAGGCAAGCAATGGACAGTGGTACCAGATGAACGACTCCTTGGTCCACGCCAGCAACATCAAGGTGGTTCTGAACCAGCAGGCCTACGTCCTCTTCTACCTGCGGATTCCAGGCTCTAAGAAGAGTCCCGAGGGCTCCATCTCCAGGACTGCCTCCCTTTCCAGCCGCCCCGGCGTGGTTCCGGACCATGTCCGGAAGAATGTCAGCAACGGAACCGCGGCCTCTCCAATGACCGGAAAGAGACCAGACCCTGTGACGATGAAGAAGCCACAGACCCCCGAAGAACTTGGAGTACCCATTGCCAGGAACGGCTCTGTGTTGGGCCTGAAGTCTCCGAATGGATATGCTCCTGCCAAGCCCCCCCTGGCGTCCCCTTCCCCCAAAGTCTGCAGAACACCCACCCACGCGCCAGCCATTCTGGATGAGCCTGGAAAGAAAGTCAAGAAGCCAGCGTCCCTGCAGCACTTCTCCCCTCCACCCAGTGCCAGCGCACCGGGAGGCAGCAGGAGCGAGGGTCGCAGGCCAGGCTCCTGGGACGGCCGGGCCGCTGTCTCTACCTCACTCCGGGCCCCAGCTGCGGGGACGCCCAATGGGCTTGGGCCCCAGGCGGGCGACGAGGGCCCCACCCCTGAGAGGGGGGGCTCCAGCCCTGAGCACCCCACCAGCAGGCCCCCGCAAGCCCCCCAGAGCGGAGTCACTCCCCTCGGAGATTCTCAGGGAACCCACTCCGTCACTGCCGGCCCGACCAAGGTGCTGCCGGCCCGACAGGATGCCGAGCCGGAGAAGGCCAAGTGCCCCGTCCCGAGCAGCACCAGCCCTGAGCCGGCCAACACCATGTCTCCTCCTCCGGCCAAAAAGCTGGCCCTCTCTGCCAAGAAGGGCTGTCTCGCCTGCTCCCAGACCCTCCAGCCATCTGAAGCCCCCCTTCGGCCCCTGTCCCCCATCACTGTCCAGCAGCCCCCATCCTCTTGGGACATCAGACCCACAGAGCTGCTCGCCCACCTCTGCACCCCTGCCTCAGGTCAATGGGGCCTTCCGGGCCCCGCTACACCAGCTGCCAGAGGCCAGTGAGCCCCTCCGGAGCCTTGGTAAAAAGAGGAAGAAGACTCGCGTGAAAGTGGGGGGCCGTGTCTCGGAGACCTGCACGGCCGTGGCGGCCCAGCCCGGGAAGAGGAGGAAGAGGAAGAGGAAGCACATGGGGGACGTGGACGCCACCCCCCTGCAGGACGAGCGGACACCAGGGCCGCCCTGGAGCCCTGAACGCAGGAAGGAGGGCCGGGCGGAGCCACCGGCAGACAGATCGGAGGAAGAAGGCAGACAGCAGCCAGGGAGTGGCCAGCGCCTGGAGAACAGCTGGCCAGTGGGATGCATGACCAATGGCCCCCATGTGAGCAGCAGGAAGAGGAGGAGAAAGGGACTGGAGAGCTGTGACGAAGAAGACTGCCTCCCCGGGGACCCACCTTGGCATGGGAGCTGCGTGCCCTCGGACGTCGTCCAGCCAGAGACTGTTGCAACATCACCGAGGAAAAAGAAAAAGAAAAAAAAGAAGCAAGAGCCACGACAAGAAGTAGAAGAGAAGGAGCCCGAGGGCCAGAGGGGCCCCGCTGTCCCTGGGTGCAGCCCCCTGCCAGCTGTGAATGGCCAGGCTCCCAGGGGCCCCACAGGGCTGGGACCGGCTCCACTTGCATCCTGGGACAGAGAGAGAGAATCCGATGTGGTCCAAGAATTGCTCAAATACTCATCTGATAAAGCTTATGGGAGAAAAGTTTTGACGTGGGACGGCGCGGTGTCGGCCGTCAGTCAGGACGCCATTCAGGACAGCAGGCTGGCCCGCACGGCCACGGTCATTGACGACTGGGACGAAGAGTTCGACCGAGGGAAGGAGAAGAAATTGAAAAAATTCAAGAGAGAGAAGAAAAGAAACTTCAACGCCTTCCAAAAACTTCAGAGTAGACGGAATTTTTGGTCTGTGACTCACCCAGCTAAGGCTTCCAGTCTGAGCTATCGCCGCTGAATGTGCTGCTGTCAAGATAGCCTCCAGAGGCACGGCATCCCTCCCCGCGGACGGTCTGTCTGGACAGAAGAGCCGCTTGCCGTGGACTCGCTGGCCTGTTGGTGGGGGAACGCCCGCAGAGGCCCTGGGCTTCTGCCCAGGTGAACACGACGTGCACTGTGACAGACCGCGTGGTGACGCACGGAGCAGGGGCAGCACAGCGACGGGGACGCGGGGTGGGGCCGGCGCCCTGTGATGCTGGCCGGCAGCGGCCAGCCTGGAGCCGCAGGGGAGGGCGGGGAGGACGCAGCCGAGCCTTCCAGGGCGCCCTCGAGCTCCGGAGGCAACAGCATGCGGCCGGTTGCCCTTCTCCATGGATCGTGCGGCTCCCACTTCTTCCCGCGGGGGCTCTGTATGCCTTACCAGTCAATCCTCGGGAAGTCAGAGCCCCAGGCTGGCCCCACGCTGCAGCCTCTCCCTTCTTTTGGAGTTGGGCGGCAGGGGTGGAGGGCAATGCATCTCTCCATCTCAAGAAACTCCTAGACCTCCTCTGGAGAGCGGACGGCTGGGGTGGGGCGGGGTGGGGGCTGAAGAGATGCGACAGCACATCTGCTGCTCAGGCTGCTGCTGTTCCGAGGTGGCTTTGCTGGACTCCCCCTCCTGCCCCCAGCCCTTGCAGCTGCAGTAACCCCGGGGTCCTTACCGAGGTGGTGTTCTTGGGGTAGATTCCTCCTTTTATTTTACTACTTGATATAAAACGTTTATTTTTGACCAGGCCTGTGGCTTCCATTAGCAATATGTCTCCTTTCCCTAATATACAAATACCGGCTTTGTTTGCTCAATTTTGTGAGTGCTTTTGAATTGAAGATGATTGTGTAACTGGAGACGATCACTATCCCTTTTTTTTATCCCGCTCAAGCTGTGCCTGCAAACTTGTAATTTAATAAATACGGGAAATCCTCAGTGAGCTGATACTGTCCAGAAAAAAGACTGGTGTCCCAGTGGTAGAAGGTACAGAAGTTAAGTCTGAAGATTATCCCTCAGCACACGTCCTCTTGGGATCACTTCTGGCGGGCGTGGCTCAATGTCTGGCCTGGTCCTGCGCTCCAGGGGAGCTCCTCGGCCTGAGCCCCAGTGCACACATCCAGCCCCTGCTTTCCTCCTCACTGAGCTTTGCCCTTCGTTCTGTCCTTTGTTCTGGGACCTGGGGGATCCAGGTGGTATCGAAAAAGCGTTAAGCATTTTTTATACGGGGAGATAAATTAATTTTTTCATGTGGGTTGTTGTTTTTGTTTTTCCTGGTTTTGTATTTCTCTCTTAAAAGGTGGGGAGGATAATATCCCATGGCCTGAGCTAGGGCTGCTCTGGCGCCAGCAGATGGGAACCAAGCTCTGCTTGGACTGGCCAGGGAGCCTTTTTCTGGAGGCCTGACTCCTGCATGTCAGCCACGCCTGCTCAGAACTGAGGGGCCCGCCCCAGTGCCCTGTGACTGTCATTTGTCATGTCAGTAGGGAAGGCAGGTGCCTCCATGGGCAGGGTTTTCTTCTCCCCATCTCAAGATGTCAGCATTCATTCCTGTGTGAACTGTTTCCCCGACCACGTTCTTGTCCTGTTTTGTTAGTTGAAAAAAGAAAAATTCTGTTATCTGCTCGCACAAAATTTATCTCCTTTTTTTTCTCTCCCTCTTCTCCAAATCAGTCTCTTCCTCTCTCCACTATATAATTACAATGCCTTTTTCTGAGGAAAACATCACCCGTTTTCTCCCAGGCAGTGATGAGCACTGGCCTGACTCCACAGCGTTTATCACTGTTAGCTAGGCGAGTCCTCCCCTTTCAAGGAGAAGCATCAGCCAAACTGAGAGGGAAAGGAGCGGCCCAGAATGCGAGCCCAGATCCTGGGTGCGTACACATCAAGGTGAAGAACTGAAGCTTTTAGGGTGACACTTGTTGACTGAGAATGTGGGTTTAATTTAACTTTATGTTTGTGAAGGGGGCGCCTCTCCTGGTGGTCCCAGGCCTCTCCCTGCCTCTCCGCTAGGGGCCCTGGTTATACTGAGGCCCCACGTGTGCGATGAGCCCGCAGCTCATGGCCAGGGACCGAGGGGGCCACAGATGTTGCCAAGATCTCAGTGCAATAAAATAACGAGTTTTTGTGGGACCTGCCTCTGTCTTTTCCCTTTGGCTTTTTTGGTTTCCTCCCACCCATACTTCAGTCTGCTGGCCCCGTTCACATGTGAGGTCAGCCTTGGGTGCTTTCTGTCACCTGTCCGTGAGTGGGAACCAGGCACTTTGGGCAGTCTGTGCAGGAAAGCTTAGAGCACATTCCTATTTAATTAGGAATAAAGAGGTTTATCTGAATGTCTTAATGTTATACATACACTTATCCGAATTTAAGAAGGCAAGAATCCTTTGAAGTGGCCCCCTGAGCTTTGTGGATGATTTTCAATGAGCATCAGATTGAAACACGGAAACAGTATCATTCCACTGAGGTCTGTTTGAAAATTTTTGTAACCGAATGTTTGGATTTCTGCAGGTAAAGATGAGGGAGACATCATAGGTTTTACCAAACTGAGTTTTTCTGACAGCTGTCAAGGGTAACGCAGGCCTCCAGTTTGGGGACACTGCCCCCACTCCCAGCCTGGCCTGGGTACAATGATGTAGTCAGGTCACCTTCAGCCCTGGACGTGCCCAGCTGCTGCCTCAGCCACGTGCTGGAGGCCCTGGTAAGGAAGGCTTGGTTCCTGCATGCACTGGAATTCAGTGGCCCACATGGACATTGCTGGTCTGGTCAGGCTGGGCCTAACAAGAGCAGGAAGATCATGTCTGGCTGATTGGACGTGTCCTGGAAGTTGGTGCATGGCCCGGAGGGGCCTAGGACCCTGTAGAGCCCCCTGTGATTGGGAGGTTACAGGTGGCAAGGGCAGCACCAGTGAGTGGGTGATAGTCCAGGGTAGGGGCAGGTTTCCGGTGGGTGGGTTTTGGTAGCCAAGCCCCACAGCTCCTCACCCCTTCCTTTCCTTCAGGGATGCCC EMBV3_21579 GTGAAACAATGAGAGACATTTGCTTCCAATCTTTGTGCTATGTTTTCATCTATCATGGAC Gene BVV0102_095558 + 0 NULL GK000002.2:59424923-59655194 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00102492 1 XLOC_061878 NonCoding TCONS_00102492 XLOC_061878 NonCoding NonCoding - 2:59615943-59626278 - TSS76299 4566 2 TCONS_00102492_4 120 0.603810775295664 2 0.55835107412425 0.00402757565469682 0.00459854681208556 0.0044666863162069 0.0025976903075525 0.00324157669816701 0.000747477827251594 0.00275194633784622 0.00212045692735038 0.00250158236731291 1.5148747486442e-05 5.01354202376388e-07 0 0.000179083499029667 0.000657120975249836 0.000244091924947248 0 0 5.49517883305758e-06 0.0029006282682189 0.00254523932471703 0.000701684407781456 0 0 6.47430723182927e-05 0.00347329550687117 0.0021191301506434 0.00188936816143644 0 5.31603872429603e-06 6.58370824166128e-06 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1324 88.36 0.227770477441962 1 noncoding 0 0 0 0 -0.596956661307764 0.0268363067349569 -0.0518187942752532 0.287062806245444 AAAAAAAAAAAGTAATAATAATTAAAGCAGATGTACTTTGTATGTTTGATAGGCTAAAAACAGGCTGTTTTGCTTAACATAAAATTCAAGTTACTTCATATATAAGCTGGAATGACTTCTCCATACTTTAATATGTGAAAATTTCTTTTGTCAACTGCTAAGGGAAGTAAACTGAACAGAAAATGAAAGGAATGAAGCAGTGCTATTACATTCTTCTGATGCAGTAGAGCAGAGTCATTAAAGGGTTGATCTTCTGTAGCCAGACCTGGGTTCAAATTCTGTTTCTGTGTTATTAACTTTGTGAGCTTGCTTATTAACATGTGTTTCTGATGTTTTGATAACGGAGACCCCTGGAGAGGCTGCCTCTCCCAAGTGTAGCCAATTTCATTTGGAAGTGCACCTTTTCCCTGCAAACCAGCCAATCCAGAGTCCATACCCTCAACAGCCTCCTTTATAGGATTCCTGCTCACCGGGGCTCTCTCCCCCAGTCTTAATCACCCCTCCCAGACAAATAGGGGCGGCCCTTATGCCCTAGAGCCAATCCTAAGCCTGTTTACCCTCTCTCACCTGTCCCTTACCCCGGAAGGAGAATGAAGTCTTTTGTCCACGTGGTCCTCATTCTCCTTCTGCCTCCTGACCAACCCTGCTGCTCCCTGCGTGATCTTCCATGGCGGGGCATCACTCGGTGGTATGGCACACCTCCTACCTAGTCTTGGGAACTTGGATTTTAAATGTAATCACAACAAACTGTGGAAAATTCTTCAAGAGATGGGAATACCAGACCACCTGACCTGCTTCCTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATCAGGAAAGGAGTACCTCAAGGCTGTATATTGTTACCCTGCTTATTTAACTTATATGCAGAGTACATCATGAGAAACACTGGGCTGGAGGAAGCACAAGCTGAATCAAGATTGCAGGGAGAAATATCAATAACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGAGAAGAAGAACTAAAGAGTCTTGATGAAAGTGAAAGAGGAGAGTGAAAGAGCTGGCTTAAAACTCAACATTCAGAAAACTAAGATCATGGCATCTGATTGCATCACTTCATGGGAAATAGATGGGGAAACAGTGGAAACAGTGACAGACTTTTTTGGGGGGGGGCTCCAAATTCACTGCAGATGGTGACTGCAGCCACGAAATTAAAAGACGCTTACTCCTTGGAAGAAAAGTTATGACCAACCAAGATAGCATATTCAAAAGCAAAGACATTACTTTGCCAACAAAGGTCCGTCTAGTCAAGGCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGCGCCGAAGAATTGATGCTTTTGAACTGTGGTATTGGAGATTCCTGAGAGTCCCTTGGACAGCAAGGAGATCCAACCAGCCATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGGTGCTGAAGCTGAAACTCCAATACTTTGGCAACCTGATGTGGAGAACTGACTCATTTGAAAAGACCCTAATGCTGAGAAAGACTGCAGGTAGGAGGAGAAGGGGATGACAGAGGATCAGATGGTTGGATGGCATCACTGACTCAATGGACATGAATTTGAGTAAACTCTGGGAGTTGGTGATGGACAGGGAAGCCTGGCATGCTGCAGTCCATGGAGTCACAAAAGGTTGGACACAACTGAGCAATTGAACTGTACCGAATAAGATACTCATTTAGTGAAGGAGAATTGGTCTGAATTGTTTGCCCACCAGTGCTAGAAATGGGATTTTTATTTTTGAAACACATTTTGCCTAGGCAGTTTTCTTTTTTACTGTTTTCCTCAGAAGTTTGAAGTCATTGCCATTGTCTCTTATATTGAATAAAGCTTGGAATTGAATAATGTTAGTGTCACCTTCACAATGAATTTGAGTTTTCTGCCTAGGTATCCAGCCTAAGTATCTAAAAATAATTTTTCTGTTCTTGACCTTTTATAGATTACCTACTGTATATTTGTAAAAAGCTTTTAGAATAAATTTTTCTTAAAAATGAAATAGAAAACATCTTGATATGCACATTTTTGTGTTTAGAAATTAAAATATTCTTGTATTATATTTTGAATGTTTTCCCCATTTCCTGAAGTGTTCTCTACCAGTTAACATCGTGGTGTACTGCTGTCTGTTGAATTTCTTTAACTTGCATTTACTATCTTTGTCTTTTTATTTACTGTGTTTTATATTATGTTTTACATCTATATCAGTAATTTGAGTAACAGAAATATTCCATTACTTTCTAATTAATTTAAATACATAATGATGTTTGGGGTTCTCTTTCTCATAATAATGGTTTTTGTTAAAATATTAGTAGTTCACTTTCTATGCATCATTTTGCTTTAGTATATTTCTGAGTTCTTATTTCACTAAGATTTTATAATGTGAAACAATGAGAGACATTTGCTTCCAATCTTTGTGCTATGTTTTCATCTATCATGGACTTATTTTCTGTAGTTTGCATACACAATGCATTTGTTAAGGTAATGCGAGCTACAATAACATTAAAAATTATTATCTATAACGTTTCATATATGATAGAAGTTTATGTCTTAACATGGATGTTCCTGAGAGTAGAGAGCTCTCTGACAAGTTTCTTCCCAAGAATCCATGCTCTTCCTATGTGTGGCTTTACCATTTTCAACACATAAGTTTCAAAGTCAAAGTATTTGTATTAAGGTGGTAAAAATGCAAACAACCGTACTGTGTCTCATGTGGAACTTTTGAATGGGCCAGTCCTTTCTCCCTTCCTCCCTTTACTCTCCCTTCCCTTTCTTCTTCTTTCATCTCTCCTTTTATTCTTTCTTTAGGCTGACCTCATTGTCAAGATTGCTTTATTTACTATTTTGCTCCTTTTTGGGAATTTCATCTACACATTCTGTTTTCTCTGATAAATTGTTGTTAACTTTTAGACTCTCCCCTTGGAAGTGTATCTTTGCTTTTTTTTTTTTTTTAATCATGAGATATAGTAAGAGGTACTTCATTATTTCTATTTTTCTATAGCCTGAGGAAATGGCAAAGAAATGGGTAAAACCCAGCTGAGGTGGTGTGAATGCTTAGTTGGAAGAGCTTGAATCTGTTCCCTTGGAGGCTTTCATCATGGAAATAATGAAATAATAACACGTACTACTGTGGCTAGGGTGAACTGGTTACACCATTCTTACGGGAATAGACTAGAGAGATTGGTTTTCCAGGATTCATTGCACTTAATCTAGGTAGGGGAGGGAGGGATACCCTATTCCTTGGCAACACACCTTTATAGAGGCCTCAAACCTTTGCATCTGTCCAAGAAGGTTAGTTCGCTACTTCTTTTTTTTCAGTTACCTATTACAGCGTTTGCAGTCTTCTTTTCAGTATCATTGCCACCATAATCCAGAATTTTCAAAGTGTTCTCAAGTATGCAAGTTGTTAAATTCCTCTGGAACCTTGGATGACAGAATAAATATCCATTATCATGCAGTTACACAAAGCAAAACAAACATGTCACCTCATGTTCTCTGACTATAAACGGGAACAAATAATCGACCCCTGATAGATAAGAAGCCACCTTAGTTTAAAAATAAATATCCTACTTATATCCTAATAAAAGAAGGAAAGTTGATTCCTAAATCTTATGCCCTGTAACTGGGCTTTTAAAACATTTCCTTTTGCCAAAGCCACACAGAACACTTAGGACTCCCCTAAGAAAAAACTGCCTGGGATTAGTTGATCCCAGCCCTGTGCTAAGTGAGAAGTTCCACCTCAAAACTCTCCTTTTGGCAAGGTAAATAATATATTTAAGGATAAGATATTTATAGGTCAAATTTAGATTTATTTGATGAAAAAATGGAAACAACTTTATTGTTCCCAAATAGAGAAACAGTTATGTTAACAATTATAGTTCTCAATCATGGAAGATTGTGATGCTTAAAAATGTTTAAAGAGTTGTGAATGATACACCAAAAACTATGGAAATGTCCTAACTACACTGTCAACTCCACAAGGTCAGATACCACGTCTATGCTTTTATCCCCATGGCACAAAAACAGACTGAAGGAGCAAATAAATGAAAGGTCATATCTGACTACATTTGACCTTTGAACAACATTAGGAGTGGGTGTGCTGACCCACACACAGTCAAAAATCTGCATCTAACTTTAGAGTCAGCCATCTGTATCCAAGTTTCCACATCTACAACTTCAACCATCCACTGATCACGTAGTACTATAGTACATATTTATAGAAAAAAATCCACATATAAGTGGATCTATGTAGTTTAAAGTTATGTTCAAGGTCAATCTCCTGTCAGAAAAGGCAAATTAGGGGCATTTCCTGGTGGTCCAGTGGTTAGGGCTCAGCTCTCACTGCCAGGCCCTAGGTTCGATCCCTGATCTGGGAATCAATACCACATAAGTGGTGCACTATTGCCAAAAATATAATTAAAAAAAAATAAAGAAAAGGCAGATCAGGTGGTAAG TCONS_00105363 TCONS_00105364 TCONS_00105365 TCONS_00105366 TCONS_00105367 TCONS_00105368 TCONS_00105369 r 3' 122305 TCONS_00105363 TCONS_00105364 TCONS_00105365 TCONS_00105366 TCONS_00105367 TCONS_00105368 TCONS_00105369 r 3' 132639 EMBV3_29858 GCATGTAGCTTTGCAGTTAGGAGTATGTCTCAGCGCTTTATCCACCTTTAGGTTACAATC Gene GeneID:616033|NARS:NM_001046572:194_cdna Constitutive 2 NULL GeneID:616033 24 GENE NARS MGC127700 asparaginyl-tRNA synthetase EMBV3_29473 TGTTCTGTCTGAACTCTGCTATGACCCCATGATGTGACCGTTAGAGGATGGACTTGTCCC Gene GeneID:504632|CNNM2:XM_002698457:472_cdna Constitutive 0 NULL GeneID:504632 26 GENE CNNM2 NULL cyclin M2 EMBV3_12884 AGAAGACACTTAGGATGCCCATGGTGACACGGAGGCTGAGGGATCCTGACGTAAACCCTT Gene GeneID:616237|CHCHD7:NM_001130759:56_cdna Constitutive 0 NULL GeneID:616237 14 GENE CHCHD7 MGC142500 coiled-coil-helix-coiled-coil-helix domain containing 7 EMBV3_00604 TGAGCTGGATTCTCCTGAACCTATGCTCTTACGTGGACGCTACCATATATTTTCCCTTCC Gene GeneID:505423|LGR4:XM_002693488:123_cdna UTR3_Alt 2 NULL GeneID:505423 15 GENE LGR4 NULL leucine-rich repeat-containing G protein-coupled receptor 4 EMBV3_09677 TCCTTAACTTTAAAAAACTTGTGTTTGTAGTTATGTCGCCGAACAGAGGCAAAGTTAGGC Gene GeneID:507579|TTRAP:NM_001105341:59_cdna Constitutive 2 NULL GeneID:507579 23 GENE TTRAP NULL TRAF and TNF receptor associated protein EMBV3_19327 GCTCCCCTGGTGAATCACACGTAACAGTGAGCAAGAATTGACAGAGTAACACCCAAAGGG Gene GeneID:509448|TFCP2:NM_001083397:50_cdna Constitutive 0 NULL GeneID:509448 5 GENE TFCP2 MGC139461 transcription factor CP2 EMBV3_38453 TAGCAACCCGGGTGTGATGGATGAGCCCCCAAGATGGATGGCTGCAATAAATCATGTCTC Gene BVV0102_045721 - 1 EMBV3_19206 GK000018.2:42046249-42253544 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00090162 1 XLOC_054943 NonCoding TCONS_00090162 XLOC_054943 NonCoding NonCoding - 18:42047203-42047975 - TSS67508 772 1 TCONS_00090162_1 68 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000140144698389963 0 0 0 0.000520020643428694 0 0 0 0 0 0 0 0 0 6.22096618789452e-05 0 0 0 noncoding 0 0 0 0 0.0771059383321297 0.610727376281655 0.00707518485566211 0.879732159614765 ACTGCAGAGTGCATATTTTATCAGCCCTCAGCTGCTTAAGTGTCTAGAAAAGACCAGGCAGTTTTTCTTTCTTTCTTTCTTTCCTTTTTTTTTTTCCAGGCAACCCAGAGCAAGTACTTGCAAGGGTCATATCTTTTTAATTATCTTTTCTCTCTTTGATTAATTATTCCGTCTGACAATAGCGTGTTTCTAATGCTATTCACCTGCCTTTGATGATTGACAACTTTTCTGTCTGATTCAGAGCAAACAGCTGCTGCCACAATCTCCTAGCAACCCGGGTGTGATGGATGAGCCCCCAAGATGGATGGCTGCAATAAATCATGTCTCCAGCCATAAAACTGAGAAAAGGGGATAAGAAGAAAAGCGAACAAAAAACAAAACAAGGTTTCTTCCCGTGAGTGCACTCAGTTCCTTACCAATTACACCTGAAATGGACTTTGCACCTCTTAATAGCAAAGTTTTTCTAATCAGTAAAAATGGGATGATGCCATTTGTATCAAAGGTGTTTACAATTGTTCCTGCAAACTGGCACTTGTACTCCAATTACCTCCAACACTGCCCAAGTGCAAGGGCAGAGGATCAAAGTTTTGCTTTCTTCCTTGAAGTCTCGGCAAGAAACAATATCATCTTTCTATAGTCAGATGTGATTCCAGACACCAACAAAGGCCATATATCTGATTCCACCCAATTTTTGGCAGCAGCTGGACAACACCAAAAGTGACTCCTAAGTCAGCCTGTGCATAGTGTCAGGCTGCTAATAAAGTTATTTCAA TCONS_00086232 . 5' 52615 TCONS_00086232 . 5' 52615 EMBV3_06185 GAAACTGGAGGAGGTGCTGTCTACCGAGGGGGCTGAAGAAAATGGCAACAGTGACAAGAA Gene GeneID:286880|PPM1G:NM_174801:39_cdna Constitutive 0 NULL GeneID:286880 11 GENE PPM1G NULL protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform EMBV3_21872 ACTGAGCCTTTCCCTCCTGATTTTGTGTTGATTGGTGAAATACAGGGTGTGTGAGTTGTC Gene BVT0102_029485 + 0 NULL GK000012.2:16744404-16771117 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26311 CCGTTGGAGCAGAAAGTTACTGCAAAGAAAGTGATGCACAAACCTTGGAAGTCGAGAACA Gene GeneID:514162|LOC514162:XM_002691888:24_cdna UTR3_Alt 3 NULL GeneID:514162 12 GENE LOC514162 NULL similar to aurora borealis EMBV3_41885 CTCCTGCACTACTTCCGCGGCCGCCACCACCTGGAGGAGATCATGTACAATGAGAATACA Gene GeneID:534485|C16ORF35:XM_002683808:26_cdna Constitutive 0 NULL GeneID:534485 25 GENE C16ORF35 NULL conserved gene telomeric to alpha globin cluster EMBV3_15235 ATAGGAGGTCAAGCTTTGATGCCTCTGACATTCTTTCCCCATTCCCCCCTAATTCCACCG Gene BVT0102_116041 + 0 NULL GK000030.2:96383615-96541497 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06544 CAGCCTGACTCCGCAGGCTACACGGCTCTAGCTGCCGAGAAGGGTCACGTGGACATCTGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42120 AAGTTGACGACGTCCGCCAACGTGTGCACATCTTGAAACAAAGACCACTTCCTAACGTCC Gene GeneID:540154|TRIM59:NM_001080310:155_cdna Constitutive 1 NULL GeneID:540154 1 GENE TRIM59 MGC137058 tripartite motif-containing 59 EMBV3_33493 TGAGAGTAGCCAGGGAGACTCGAATGCTTTGTGATAGTGGAATTCTGCTCTACCCCTAGG Gene BVT0102_153093 - 1 EMBV3_31226 GK000005.2:112642912-112685001 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00193469 TCONS_00196524 TCONS_00193468 TCONS_00193470 2 XLOC_117490 XLOC_118362 Coding TCONS_00193470 XLOC_117490 Coding Coding XPNPEP3 5:112636631-112680577 j TSS144586 3653 1 TCONS_00193470_2 371 9 0.91707816588918 2.16185783366938e-08 0.000177394105054471 9.94686800678707e-07 0.000179704775364482 1.01814773722291e-09 1.50847036236293e-05 8.38099854531697e-06 0.000434912340734974 0.000384168233403023 1.60807847083012e-09 3.53773386343424e-05 3.6172222571646e-05 9.73549333693489e-12 6.22821745921332e-05 0.000440547369802482 0.000773262052625231 0.000186324544966826 0.00138897030587865 0.000173952177704095 1.68535754680716e-14 1.90033625260555e-18 0.000153118060099379 0.000926535619293039 0.000989403219841391 0.000736623669099878 0.000380698411168749 6.52447982712523e-05 1.57477414017216e-29 0.000190476294825203 4.06347419372123e-05 XM_005207416.1 XPNPEP3 PREDICTED: Bos taurus X-prolyl aminopeptidase (aminopeptidase P) 3, putative (XPNPEP3), transcript variant X2, mRNA. 0.0 6091 100.00 0.924171913495757 NM_022098.3 XPNPEP3 Homo sapiens X-prolyl aminopeptidase (aminopeptidase P) 3, putative (XPNPEP3), transcript variant 1, mRNA. 0.0 1543 80.51 0.452231042978374 TCONS_00193470_2 sp|Q9NQH7|XPP3_HUMAN XPP3_HUMAN Probable Xaa-Pro aminopeptidase 3; 0.0 597 89.39 0.835579514824798 1 coding 0 0 0 0 0.0105646836834686 0.933064737208683 0.019257314821961 0.808123774438082 GTTTCCTGGCGACGCATCCCTGCTGGCGACCGCTTCTCCGGCAGGTTTCCTCGTTTCCTTCCTGACGCCTGAGCGTGGCAGTTATGCGTTGGCTATTCTCTGCAACTAGGCTTGTTCCCGCGGTAGCAAGCGCCCGCAGCCTCTCAGGATGCTTGTCATGTTCTCGGCGAAGATACTCCCTGCAGCCCATCCCAGAGAGGAGGATTCCAAACCGATACTTAGGCCAGCCCAGCCCCTTTACACACCCACACCTCCTCAGACCAGCTGAGACACATACACTGTGGTATGACTGGATGAGGCCTGCTCACAAACAACTCCACTGTGACTACATGCAGCAGCTGGCGGAGGTCAAAGCCAGGAGCAAGAACAAGGTTCGGGCTGTGCAGCAGCTGGTACAGCGCCTCAGGCTGATCAAATCTCCTGCAGAAATTGAACGGATGCAGGTTGCTGGGAAGCTGACATCACAGGCTTTTATAGAGACCATGTTTGCCAGTAAAGCCCCTGTGGAAGAAGGCTTTCTGTATGCTAAGTTTGAGTTTGAATGCCGGGCCCGTGGTGCAGACATCTTAGCTTACCCACCTGTGGTTGCTGGAGGTAACCGGTCAAACACTTTGCACTATGTAAAGAACAATCAGCTCATCAAGGATGGGGAGATGGTGCTGCTGGATGGAGGCTGTGAGTCTTCCTGCTACGTGAGTGACATCACTCGTACCTGGCCCGTCAATGGCAGGTTCACGGCACCTCAGGCAGAGCTGTATGAAGCTGTTCTCGAAGTCCAGAGAGATTGTCTGACCCTCTGTTGCCCTGGAACCAGCTTGGAGAACGTCTACAGCATGATGCTGACGTTGATAAGCCAGAAGCTAAAGGAGCTGGGGATCACGAGGAACATTAAGGAGAAGAATCCCTTCAAGGCTGCTCGAAAATACTGCCCACATCATGTTGGCCATTACCTGGGGATGGACGTCCACGACACTCCAGACATGCCCCGCTCCCTCCCTCTCCAGCCCGGGATGGTAATCACCGTGGAGCCAGGAATTTATATTCCGGAGGACGACCAAGATGCCCCTGAGAGGTTCCGTGGTCTCGGTGTACGAATTGAGGATGATGTGGTGGTGACTGAGGCATCCCCGCTCGTCCTTTCTGCAGACTGTCCCAAAGAGATGAAGGACATCGAACAGATATGCAGTAGGGCCTCTTGACCCTCACGGCAGCCCGCGTGGGTCTCGGGTGCAGGGGGGGTGGACGCAGGTACCTGTGCGTGTGTGCTTTCCAGGGATCTCTGTGTGGATACTTGTTCATGCATTCCCTTGGGGAGTGCTGCAGCTGTGCAAGTCTGTGTGAGTCTGTGTGTTGTCTTTTTGTTTTATGTGGCTAGAAACTTGGAAAAATTGCATTTTTGGACTATATGTTACTGCAACTTTATTAACATTAATTCTGTAGAATTAATGACCGAGACAAGGTTAATGTTAAGATATAAGGAAAGATGTTGGTTACATATGTCCATGCATTCCAGTTGGCACTTGTGGAAAATTCTCTCCAGGTCCTTCCCCTTCTGCACTTTTCCTGAGATCTACCTAATATCATCAAATTTTCGTGTAATGCTTACACTTCGAGCTAATCACCAGAGTCTGCCCACATTGAAAGCCGCCTGTCTGATTGTGGGTGGCCAGTGTGTACCTTCCATGATACCTGCCTTACCTGTTCAGGAGCCCACGTGAGCCCTCAGGGCACTGGTGTTCTCCAGCCCCATCACTGAGCCACAGTCCAGATTCCAGCAACACTAGCTATCGAACAGAACATTTTTGAGCTTTTTTTACTATTTGGTTGCCTGGGACCTGGAAGGTGTTTAGATTCTTGATAAGGAAGGAAATGGAAGAGAAAGAAAAGTATGTATGTATCTGCTCTAGATCCAGACCACCATCTGTCTGTTTTCAATCTAAAGAGCACTCCTTTCCCAGATATCCTTGCTGTCTTTATAGACTCTTACCACACCGATCCTCAGAGCACAGCCTTGAAGCTGCTTCTCTGGCCAAGGGCAGATCCTCTGCTCACCGAGTTAAGAGTCAGGGGAACAGCACCCAGTTATCATTCTGTGATTTCCTCTAGTGCTGATAAAAGCAAAACATGGAACCCAGCCAGTAGCTGTAAACACCCTCTGATCCTTTCCTTTCTTGGACGTTAGCCTGGATGGGCAATGGGAAAGCCCAGCGTTTCCCTCCATACAGCATTGAATGCAGTTATGTTAAACTCAGTTTGCAGAGTGAACGGGGCTAGACCCCTGCAGATGGTTTATTTGGGAGCTTCAGTCATAGGGGGCTGCTTTAGGAAATAGTGTATTCACCTCCTTTAAACCTGAATGTGAGCCCAAAATGTATAAAACATGCTGTTAGAACATAAATTTAAGAAAATAATTGCTTTAGGGAAGAACAGGCTAGGAGAGGAGCATTGTTGCCTCTGCCACATACTTTTATGGCTGTGAAAGTATTCAGGAGTTGCTATTTTTCTCTGTGATAAAGAAACTATAACTATGTTTTTTTAACTTGAAACACAGCAGTTAAGAAGTAAAATAATAACTCTCCTCTTCCCATAATTGTACCCAAGTTAGGAAGGTACCTCTCATGGTGACTTAAAGATGTCTTCGTGTATCTTCTTTCAAAATATTATCTTTTCATTAACTTTCATATGGTCAGAAAAGGAAAACTACTATAGACATTATATGTTAATTGGGTTTAAAAGCCATAAAATAAGTTAAATCCCCAGATAAAGACACTATATCTCATTAAAATTTTAAAAATGGGCTTTGTTACATATTTTAAGACATACATAACCAACATCCTCCTTAACTTTCTTAATAATAGAAAGACTGCAGACATGATGCGTGATGCTGCCTCTCCCTGTCCTGTGTCCATGTCAGATCACAAGCACAGCACAGCAGCTTTCCGCCAGCCCAGCTGTGACTTCAGAGTCCTTCCAGTAACTGCTGTCAATAAAACAGGAGCTGGGCTTTGAGTTAGACTCTGTCTACCATCCCTCAGCTGGCATATGATCAACGATCATGTAACTTATTTTTGTATGTATGTTAGAAAGTACGTGAGGGCCGGGGTGGCAGCATACAGGACCTCGCTTAGAAGAGGTTTTTATGGTGTGGTTCTATTTTTTTTTTTTTTTTTTAGTTTCCTGAAGTGGGATCTGTATCCCAGAATGTAAGCTGATAAGGGTGCGTTTTAAGCCTGAACAAATATACTTCAAGCTGAAGTGCTTAATAATTCTAATGACTGTATCTCGAAGCCCTAGGGGTAGAGCAGAATTCCACTATCACAAAGCATGCGAGTCTCCCTGGCTGCTCTCACCTCCACCTGTGTGTCCCTGAGGAACTCAGGGTGAGCATCAGTATTATTCGGGTCAGGGGTCTCCACTGAAATCCAGGCCTTTGGGGGTTTGCTTCATGAGGAGCTGAGAGAACTGCAGTCTTTGCCAGCATTTCTTAATGCTTTGTTTGACTTTTGTGCAATTATATAAGTTCAATTTGGACAAAATGCTGTTACTTTTTAAGGCGCTATTGACTGAAAATAAATACATGGTTCCCAAACAAGGGAACAGCATTTGTTACTGTCATTTTAAAAATAAACTGTAAAACAATATAAGAATGTGTG EMBV3_26267 GCACGGAAGGGGAGATGAAGGATTTCAGGTCTACATTTTATTGCTGGCGTATTCCATAGG Gene BVT0102_156127 + 0 NULL GK000020.2:39199659-39225165 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117154 1 XLOC_071320 NonCoding TCONS_00117154 XLOC_071320 NonCoding NonCoding - 20:39220519-39221777 - TSS87622 1258 1 TCONS_00117154_1 82 0.55087440381558 1 0 0.000118968717715505 0.000319504744880233 1.47122399122729e-05 0.000204633185522949 7.06432680842363e-05 4.54951723621741e-05 9.27140076464901e-06 1.41050401370332e-05 7.52635462498609e-05 6.21425875891552e-05 3.63940330284323e-06 0 2.28083072099257e-06 4.11318924012577e-05 4.87499680079665e-06 0 0 0.00275242213591994 3.42015248163012e-05 0.000102898127214008 0 0 5.83405043873171e-05 2.66528313717073e-05 0 6.16057516331826e-05 0.000181643375233003 0 1.92949606434483e-05 0 0 noncoding 0 0 0 0 0.0364576343564908 0.752725525897706 0.0302777441812208 0.714975588946877 ACCTGCGGCAGGAAATGCAAAACAGAGGCTTCAGCAAAGCAGTTTATTTCTCTGGAACGCAGAGGCAAGTAGTCTGGGGGCTCACAGGGTTCTTCATAGTGTCAAGGACGGCACTTTTCTGTGAGGACTCATGGTCCCAGATGGGAAGCTGGAAGCTCGTCATTACCCGTTCATTTAACCTGGTGGAGGAAGGAATACGGACCTCCCAAGTCTTTGAGGACATGTTCCCAAAGTTGCTCAGATCACTGGCCAGAACTTACTGACACCTGGCAGCACGAGAGGCTGGGAAGGTAACCTTTAGATCCTAGGTGGCCTGCACCCAATTAAAAATCAGAATTGTAAGAGGGAGGGAATTGAGAAAGACAAGTAACAGCCTCTGCCAGTGAGCCCATGGAATACGCCAGCAATAAAATGTAGACCTGAAATCCTTCATCTCCCCTTCCGTGCATTTTCTGTTAACAAGAAATGGACCACTAATTTGTATTTCTCTGGATATTTGAAGTATTTAATGAAAACGTGGTACTAGAGTAATAAATCCTCATTGCCACTGCTCAGAATTCAATCAGTGCTAACATCTTCCTTCAGATCTTAGTAAGAAGTCTTGGCTCAGATGCGGAGCCTTTCCCTCCCTTTCCGAGGCAACTGCTTTTCTGAATGATGTGTTTTCCACTGATGGTTCTGTATTTTCTCCTTATAAATAACAATAGTACTTTAAAAAAACTACATATAAGTGGCATACATATCACCTTCTGATATCTTGTTTTCATTCAATATTTTTTTAAGGGCCAGCCACTGATGCTACATATCAAGTCCACTCATTTTAACTGTTCATTTGCCGTCTAATTATCCATTATGCAATTGATTTCTTTTCTTGTTCATGGAAATGTAGGGTCCATCTCCAAATTTTCCCAGACACAAGCAATTCAGCTGTAACCAGCCACTAAGTCTTCTTGTCCACCTGCACATGGGTTCCTTAGAGTGCTGCTTCTCAAGCTGCAAGGAGTCAACCGAGAAGTCTTGTTAACCTCAAACTCACTCAGCAGTTCTGGGGTGGGTCCTGGGTGACAGTCCCCGTGCTGTAACTCTGCAGACACTGTGAGCCTCTGAGACTACCCTGGAGTTGTCAAGTCAGGGGGTTCATCTTCCACTGTCATAGACACCATCACTTTGAAGTGACTGTTCTCATTTCTCCATTCTTGGCAACACTGGATCCTGTGAGACTTTTTTGCCTTTTGCCCATCTGAACACCTGAAACGAC TCONS_00115059 . 3' 1726 TCONS_00115059 . 3' 2983 EMBV3_28354 TCTCCAGGCACCCTTTCTATCGAGCCCAAGAAGGTCAGGAGGTTCCCCCATCACCGGTTA Gene GeneID:519961|ATG2B:XM_002696832:641_cdna UTR3_Alt 2 NULL GeneID:519961 21 GENE ATG2B NULL ATG2 autophagy related 2 homolog B (S. cerevisiae) EMBV3_00621 AGTGAGTGACAGTACTAGCTGGGGAGGCTATGCATGTGTGAGGGTAGAAGATACATAGGC Gene BVT0102_265827 + 1 EMBV3_41523 GK000011.2:78975681-79487138 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41612 AGGCCCTGGTCTACTCTGACTACCTGATCCTGCTCAACAGCTGTCTCAGTCCCTTCCTCT Gene GeneID:783700|GPR152:XM_002699397:412_cdna Constitutive 0 NULL GeneID:783700 29 GENE GPR152 NULL G protein-coupled receptor 152 EMBV3_22654 TATAGGAGAAAGCACAAGAATGGACTAGAACCTTCAGGGTGTTTGGAGCTGGCACGGAGC Gene GeneID:533757|ADNP:XM_002692502:622_cdna UTR3_Alt 1 NULL GeneID:533757 13 GENE ADNP NULL activity-dependent neuroprotector homeobox EMBV3_32939 TTGAGGAGGCGCTATGCTTCATTTCCGGTTCATCTGTATAGAAGGTATATTTTTTCCATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06198 TTCTGCCAGCAGGACTTTGATAAGCGCTGTGTGAAGCAGGACAGACTATGTGGAGGAGGA Gene BVV0101_056074 + 1 EMBV3_25480 GK000020.2:66419875-66568769 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18898 CTGACGACGCGACCAGGACCTTGGGGAAAGACATGAAGTTATCAACATTAACCTGAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30285 CCCCAGCACCTGCTCAGGAACCCACACGAGATTGGCATAAATCCAGGACTGATGGCTGCT Variant GeneID:517825|TDG:NM_001083696:1031_cdna 304^548 4 EMBV3_36759 GeneID:517825 5 GENE TDG MGC140185 thymine-DNA glycosylase EMBV3_07734 GCCCAGGTGGATGCTGAAGAAAAAGAAGATCTGGAGAAGATGAGGAACATAATTCCATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14042 TTAACCCAAGGCTTGCAGTCAGTGGCTCCTGTAACACACTGAAGACAGCTGTGTCTCAAG Gene GeneID:532838|FAM55C:NM_001081529:20_cdna Constitutive 1 NULL GeneID:532838 1 GENE FAM55C MGC152085 family with sequence similarity 55, member C EMBV3_02964 TGCCCAGGAAGATCAACACGGGGAAGAGCAAGGTGAGGCGAGTGAAGACCATCTACGACT Gene GeneID:327705|ASAP1:NM_175821:8_cdna UTR3_Alt 2 NULL GeneID:327705 14 GENE ASAP1 DDEF1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 EMBV3_13854 CAGCCTGTCTCTGTCCCTGGTGGGTCTCCTCAGCTAGTAAATCAAGACCAGCCTGTGAAC Gene GeneID:514413|LOC514413:XM_002689169:210_cdna Constitutive 0 NULL GeneID:514413 7 GENE LOC514413 NULL similar to Membralin EMBV3_04657 TGCTTATTTAGATAATCGTACTTCGTGAGACAGGCACATCATAACTAAAAACTCTTTATA Gene GeneID:282043|RPE65:NM_174453:7_cdna Constitutive 2 NULL GeneID:282043 3 GENE RPE65 NULL retinal pigment epithelium-specific protein 65kDa EMBV3_05960 TGGCCTGGAACTAAAATGCCTGGACAGTTGGGGAATGTGGATAGGACAGCATTTGGACTA Gene GeneID:614906|MRPL3:NM_001080317:42_cdna Constitutive 0 NULL GeneID:614906 1 GENE MRPL3 MGC128404 mitochondrial ribosomal protein L3 EMBV3_19541 TGGAGGGTGACCGGGGATGCACGGTACCAGAGGGGTGGGCAGGCTGTGCTGGAGAACGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21152 TCTGTGGAGTGCTGGTGCTGGTGTCCTGGATCATGGGTGTCCTGAACTCTTTGCTACAAA Gene GeneID:541022|LOC541022:XM_002688674:99_cdna Constitutive 0 NULL GeneID:541022 7 GENE LOC541022 NULL similar to CfOLF4 EMBV3_21368 GGTGCAGAAGGCTGACCCAGATTAGTCAGCAAGAAATACCCATACATCCTTCATCTTCTG Gene GeneID:514072|C20H5orf34:NM_001083426:71_cdna Constitutive 0 NULL GeneID:514072 20 GENE C20H5orf34 C5orf34 MGC137990 chromosome 5 open reading frame 34 ortholog EMBV3_21768 CAGTTTCGACAGTGATAGGAGTGGAACAGTGGATCCCCAAGAATTGCAGAAGGCCCTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19042 GCTGATACGTGAAGAAGGAACAACAGAGTTAGACTGTTACCATTTTGTAAACTGTAACGG Gene BVV0102_364238 + 1 EMBV3_30539 GK000002.2:116343432-116441986 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_27549 CACTAGGAATGAAACCAGTTAGTCCAGCTCCCCTTTGCCCTGTATGGCAGTTACACTTCC Gene BVT0102_046358 - 0 NULL GK000026.2:16646599-16721024 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00424 AAGCTTTTAAGACAGAGTGGGAAGCTCTGGAACTGACGGATCACCAATGGGCGCTGGATG Gene GeneID:508371|TMEM111:NM_001035056:62_cdna Constitutive 0 NULL GeneID:508371 22 GENE TMEM111 MGC128026 transmembrane protein 111 EMBV3_33796 GAGCCCATGGCCGTGGAGTTGTGCAGGCTCGGGGCTTTAGAAATCCTTGAAGAAATTAAT Gene GeneID:525665|ARMC3:NM_001077966:106_cdna Constitutive 0 NULL GeneID:525665 13 GENE ARMC3 NULL armadillo repeat containing 3 EMBV3_13732 CAAAGTGGGAATCTGACTTGCCCAAAGCCACAAAGCAAGTGAGCAACTCAACAGAGGCTC Gene BVV0102_038437 - 1 EMBV3_12139 GK000010.2:28564466-28577030 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013338 TCONS_00013341 TCONS_00013339 TCONS_00013340 1 XLOC_008096 Coding TCONS_00013339 XLOC_008096 Coding Coding C10H15orf24 10:28548917-28566267 = TSS9930 2928 1 TCONS_00013339_3 241 0.0778688524590164 5 0.831517666724307 0.0004232409018306 0.000468993071267449 0.000330881724198801 3.29348356975437e-06 0.000486109047598035 0.000223117962539635 0.000592426692856155 0.000240270237337705 0.000711763254577028 5.81652418806734e-249 4.00452007469789e-05 3.09718754755852e-05 0.0001409391406612 3.50229124043922e-05 0.00013272092405247 0.000560221747164772 0.000607427182461177 9.2242444197155e-126 0.000398020074984727 0.00062692088320619 4.98666269627221e-05 0.000103330780781623 0.000134525811357875 4.89677289647811e-09 0.000530527051825519 0.0002846557088463 0.000405629991375521 5.96713233767926e-05 3.10528239126067e-05 0 NM_001099143.2 EMC7 Bos taurus chromosome 10 open reading frame, human C15orf24 (EMC7), 0.0 1900 99.53 0.363729508196721 NM_020154.2 EMC7 Homo sapiens ER membrane protein complex subunit 7 (EMC7), mRNA. 0.0 1452 90.60 0.360997267759563 TCONS_00013339_3 sp|A5PJA8|EMC7_BOVIN EMC7_BOVIN ER membrane protein complex subunit 7; 3e-174 484 99.59 0.995850622406639 1 coding 0 1 1 1 0.0674445756887501 0.623521627548784 0.0111388412237901 0.882297226218666 GATGACGACATCAGCGCGCCGCTGCAGCGACTGCGAGAGACGGGGAGGGTTTCCGGGGCTACCGGCCTGACCGCCGAGAGCTGCTGTCATGGCGGCCACTCTATGGGCCTTCTTTTCCGTCCTCCTGCTGCTGCTATCAAGGGATGCCCAGAGCTCGGAGGTGTCTGGGTCTACCTCCGACGGGTCAGGAGGGAGTGGGGTCGGCACTGGAGATCGCTTCAAGATTGAGGGGCGTGCGGTTGTTCCTGGAGTGAAACCCCAGGACTGGATCTCGGCGGCCCGAGTGCTGGTAGACGGAGAAGAGCATGTCGGCTTTCTGAAGACGGATGGGAGTTTTGTGGTTCATGATATACCTTCTGGATCTTATGTAGTGGAAGTTATTTCTCCAGCTTACAGGTTTGATCCTGTCCGAGTGGATATCACTTCAAAAGGCAAAATGAGAGCGAGATACGTGAATTACATCAAAACATCAGAAGTGGTCAGACTGCCCTATCCTCTCCAAATGAAATCTTCAGGCCCACCTTCTTACTTTATTAAAAGGGAGTCTTGGGGCTGGACAGACTTTCTGATGAACCCAATGGTTATGATGATGGTTCTTCCATTATTGATATTTGTGCTTCTACCCAAAGTGGTCAACACAAGTGATCCTGACATGAGGCGGGAGATGGAGCAGTCAATGAATATGCTGAATTCCAACCACGAACTGCCTGATGTTTCTGAGTTCATGACAAGACTCTTCTCTTCAAAATCATCTGGCAAATCTAGCAGTGGCAGCAGTAAAACAGGCAAAAGTGGGGCTGGCAAAAGGAGGTAGTCAGGCAGGCCAGAGATGGCATTTGCACAAACGCAGTAACACTGGGTGACATCCATGTCCCGAGGGAAAGCCGTGTGAGGCAACTACTGTAAACTGAGTCATCCTGAAAGTTGATCTCTTACAACTGTCATGTGTGATAACTCTTCAGCACAGGTTTTGTATTTGGTACACAAGGAAACCCAGCTTTCATCCTTTGTCTGTATGAGGTCAACATTGATGTCACTGAATTAATTACAGTGTCCTATAGAAAATGACATTAATAAATTATATGAAGTACGATACATTATGTATATTAAAATAAGTCTTAATCCAGAGATAAAGTTATTTTGTCATTTTTTTTTCACTTTAATGTTTCCTTTAGTCCTTACGGTTTTCTTCTGTCTTTCATTATATGAGGCTTGAACTTAACCTTTCCTGTTTAAAAAGAGTGCTTAGTGTTTTTAGAACAGCATGCACCATGGGTTTCTGTGTAACTAGACTGTTTAAAATTCTTAGTCCTGCCCTGTAGTTTTAACATTCCCTGATATTTGAAGTAGAACCACATGTTCCTGATGTAGTTTTAATCTTTATTATTACAGCTGGTTTCAGAGTGTGGATGTATGAATTAGAGTGGATGTTATCAATCTTTAAATTCTGGTTACCATCTGTGGTTTCATTTTATAATTATTGAACATCAGCTTTATACTGTGATTCAAAGTAAGATACAGAGATGGATAATACCCAGTGCCTGTCTTCAATAGAGCTTATTATGTATGGAGGAAACACAAATAATGACAGAGAATGAGTGGCCAGGGGAAAGAAGCACAGGAGTAGGAGAGCCTTATAGAGTCTGAGGATGGAAAATCAATCTCACAGCTCCATGTTGTCATGTTGATAGTAGAGCAGAGGTCCTTACAAATCCTCTCATCTTCCCCATTATTGATTCTCAGCGGTATTGGAATATAAATTACTACTTTGCAGTTAGGAGTATCTCAAAACCTTTTTATTTCGATAAGTTATGGCAACTTTTCTTTTGGATTGTTTTAATTTAAAGAACTCTGATGCCACAGTATTGCTTCTAGTAGGGCTCCTATCTTCTCCTGTTAAAGAACCCCCCTGTTGCTTTCTTAGGATTATTAAGTTTAAAAAAAAAAAAAAGGATTGGTTCTAAATTCTTATTTTCCTTCTTATAATAGGTACCATTGTTCATTAAAAAAATTTTTTTAATTTATTCATTTATTTATTTTGGCTGCGCTGAGTCTTTGTTGGCCATTGTTCACTTTGAAATGAGGTATTTGAGTTTTCTTTTAAAAAAATAAGTTAAAAACAATTAAAAAAAAAAAAAAGAATCTCCTGGCTGTCCAGGTGTTAGGACTCTACTTCCACTGCAGGGGGCAGAGGTTCGATCCCTGGTTGGGGCTCTAAATCCTGCATGCCATGTGACTTGGCCAAAAAAAAAAAAAAGAAGTTCTGATTCAGGACATTTTAAAAACTGTATCTCTGATTACATTACGTACACTAAAGTTACCACACTAGTTAAGCTATGAATAAATAAGGTGAATAAACTGGATAATGGTAGAACTAGGTCTTTTAAAATAATTATTTATTGAAATAGCTAAAATATCAGAGCATGAATTGAGTTAAAGTTGCAGTTCAAAAGAGTCAGAATATAGTAAGAGTCATAGTTGTTTGGCCAGAAATTATGTTCAAAAGTTTGAAAATTTGGGTTGTCAGAATTTGCACATGGACTATGTGATAAGCTAGAAATTAGAAAGCACTTCCATGCTAATTTAAAAAGTATATGTGATTATTTTACATAGATTTTAACACAGTCTGAACATAATATATGTACCCCTTATCATATTACAGAATGTTACTGCATTGGTTGTATATGAAACTTTTATCTTTGCACAGACCCTTCATCAAATACTTAGTGTGCTTACAGGTGCAGAAATGATGGTATATTAGACAATATGGAGTTGAGTGCAAAGAGCCTCTGTTGAGTTGCTCACTTGCTTTGTGGCTTTGGGCAAGTCAGATTCCCACTTTGAACCATCTCTTGTCCTGTTCATTGTTGTGTTTCCAACATTGAGCATGCAGACACATAATAAATGTTTGTTGAATGAATAAATGGG EMBV3_25601 GCCAGCCTCTGGCTCCAGCTCTCCATTGCGAGGTCCCACCCAGCCAGGACCCCCAAGGTC Variant GeneID:539774|PHF23:NM_001024570:156_cdna 352^462 1 EMBV3_04591 GeneID:539774 19 GENE PHF23 MGC2941 PHD finger protein 23 EMBV3_40385 TCAGAACCGTGTGGTTGGTTTGGGGGGTTGTATTCGGGGAAGGCACTTGGCGATATTGTA Gene GeneID:784529|BCOR:XM_002700212:151_cdna Constitutive 0 NULL GeneID:784529 X GENE BCOR NULL BCL6 co-repressor EMBV3_21162 GTTCGTAGACCGGTCAGGCCAACGGATTCCGGGGCCTGCGAAGCGTCCTTGGCGTGCTCC Variant GeneID:505159|FDX1L:NM_001080226:303_cdna 268^331 7 EMBV3_40958 GeneID:505159 7 GENE FDX1L MGC152067 ferredoxin 1-like EMBV3_12631 CTCAGGAGGAAGAAGAGGAAGACCAAGGAAGAACGACTCAAACAGGAAATCGAGCGCCTG Variant GeneID:777788|DDIT3:NM_001078163:88_cdna 465^577 2 EMBV3_26396 GeneID:777788 5 GENE DDIT3 MGC152049 DNA-damage-inducible transcript 3 EMBV3_27022 TAAGTGAATCCTGTTCCCAAAGTAACCGCCTCCCTTCCTAGATGAGCCCTGGGGACTGTT Gene GeneID:337917|IRF1:NM_177432:28_cdna Constitutive 0 NULL GeneID:337917 7 GENE IRF1 NULL interferon regulatory factor 1 EMBV3_41893 CAGGCACTGCGGCCACCTCATTCACCACAAGCGCGAGGAGGACAAAGCCCAATATGTTCA Gene GeneID:525938|LOC525938:XM_002699398:415_cdna Constitutive 0 NULL GeneID:525938 29 GENE LOC525938 NULL similar to gluthathione S-transferase, class-pi EMBV3_20633 GCACACGTGTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCACATATGGAAGATCTCG Gene GeneID:507865|MARCH7:NM_001100317:79_cdna UTR3_Alt 2 NULL GeneID:507865 2 GENE MARCH7 NULL membrane-associated ring finger (C3HC4) 7 EMBV3_26479 TTCCTGGAGAAGAAGGGACCCCGAGATCGGGTAGAGAGCCTGGAGTCTCGGGAGATGTGG Variant GeneID:505456|STAP2:NM_001034246:182_cdna 204^398 3 EMBV3_07816 GeneID:505456 7 GENE STAP2 MGC127502 signal transducing adaptor family member 2 EMBV3_37335 GCCAGCTACCAGGATAACATTGGGCAGCTGGAGAATGATCTGAGGAACACCAAGAGTGAG Gene GeneID:532236|INA:NM_001075958:174_cdna UTR3_Alt 2 NULL GeneID:532236 26 GENE INA MGC142838 internexin neuronal intermediate filament protein, alpha EMBV3_04160 GCGTTCGTGAGAAACCATACAGAAAATGGCCTTCGGTGTCCTTCCTGCATCGCTGCCTTT Gene GeneID:506634|LOC506634:XR_083925:497_cdna Constitutive 0 NULL GeneID:506634 18 PSEUDO LOC506634 NULL hypothetical LOC506634 EMBV3_17740 GCGTCTACACCAACCTCTGTCGCTTCACCAAGTGGATCCAGGACACTATCAAGTGCAATT Gene GeneID:617418|KLK5:XM_002695137:666_cdna Constitutive 0 NULL GeneID:617418 18 GENE KLK5 NULL kallikrein-related peptidase 5 EMBV3_25320 CGCTGTCTTTCTGGAGCAGACTCTCTCCAGACCGTGTTCCTGGGCTTGAATCGCTCAGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26735 CATATTTACAGGGTATGCGATGCTTGCAGGCAGAGTTCCAGCAAATGCCACCGTATAGGG Gene BVT0101_070957 + 1 EMBV3_11358 GK000012.2:13635027-13945070 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42322 GATGGAGGCAGGCATTGACCGCGTGAAGGTATCCAAGGCAGCTACCGACCTGCTGCAGTT Gene GeneID:529425|LOC529425:XM_002688763:76_cdna Constitutive 0 NULL GeneID:529425 7 GENE LOC529425 NULL similar to hCG1650801 EMBV3_04123 GATGTGATCTCCTCCATACGGAACTTCCTCATCTATGTGGCCCTGTTGCGAGTCACTCCT Gene GeneID:615897|TOMM5:NM_001143740:16_cdna Constitutive 0 NULL GeneID:615897 8 GENE TOMM5 C8H9ORF105 MGC133505 TOM5 translocase of outer mitochondrial membrane 5 homolog (yeast) EMBV3_03976 AGGGAACATTCCGTCCAGTGAAAAGGCTCTGGGAAGAAGGAATTGAGTGAAGCTGGGGTG Gene GeneID:515146|XYLB:NM_001034483:113_cdna Constitutive 0 NULL GeneID:515146 22 GENE XYLB MGC128850 xylulokinase homolog (H. influenzae) EMBV3_00471 AAGCAGCGCCGCCGGGTGCTAAAGACACTAAAGGGACATTATGTGACGCTGGCCTGTAGT Gene GeneID:528833|LOC528833:NM_001103265:179_cdna Constitutive 0 NULL GeneID:528833 10 GENE LOC528833 MGC151848 hypothetical protein LOC528833 EMBV3_23779 CTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTACAGATCCTGGA Gene GeneID:506776|LZTR1:XM_002694646:151_cdna Constitutive 0 NULL GeneID:506776 17 GENE LZTR1 NULL leucine-zipper-like transcription regulator 1 EMBV3_40847 GGTAACAAATAATCCACCAAGGAGTTAATACAAATTTAACCAGTAAAGAAGCTAACACCC Gene GeneID:782387|RAG2:NM_001082469:72_cdna Constitutive 0 NULL GeneID:782387 15 GENE RAG2 NULL recombination activating gene 2 EMBV3_06152 TAATAGTTTTATCACTGTTTCCTTGCCCCAGACGTATCCAGGGTCATAGGAGTATGAATC Gene GeneID:536696|YAF2:NM_001076079:30_cdna Constitutive 0 NULL GeneID:536696 5 GENE YAF2 MGC143071 YY1 associated factor 2 EMBV3_36994 TAGGACCACACTGTCATCAGGCTGGTGGCAGCAGAGCCTGACCTCAAGAGGCCCTGCCCT Gene GeneID:512457|WWP2:NM_001083414:204_cdna Constitutive 2 NULL GeneID:512457 18 GENE WWP2 MGC142390 WW domain containing E3 ubiquitin protein ligase 2 EMBV3_25805 GACTACTTTCAAAAAGGTCAAGAAGTGCATTTGCCCATCCCAGCGCCTCTGAAACCTCGG Gene BVV0102_135749 + 0 NULL GK000008.2:88083520-88423419 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05432 CGAGACCTGTAAGCAGCACCATCGAGGTTTTAAGATGCCTCATTTGGGTTGGACTAATTC Gene BVV0102_202974 + 0 NULL GK000024.2:39404645-39736796 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00142620 TCONS_00015575 TCONS_00015577 TCONS_00015578 2 XLOC_087045 XLOC_008514 Coding TCONS_00015575 XLOC_008514 Coding Coding B2M 10:104124756-104145315 j TSS10968 1017 1 TCONS_00015575_3 128 5 0.95077342153906 0.00515831220259295 0.00396559730548998 0.00581548061011082 0.00455918785962006 0.00569253062003185 0.00181959664969767 0.00378220141921693 0.00323588863758817 0.0061986191558071 0.00221608076542559 0.00032633542511137 0.000576818630805515 0.000812997280623498 0.00137385974109249 0.00253815279727738 0.0534393013964208 0.0182158469019524 0.0547824284703727 0.00198665048536582 0.00330519155629453 0.000295260520650353 0.0131901000515886 0.0143389112408803 0.0247018857050039 0.00267993040205096 0.000828959543027004 0.00195161469801342 0.00327922095399746 0.00172219768874876 0.00318857757414846 XM_001251107.4 LOC783680 PREDICTED: Bos taurus beta-2-microglobulin-like (LOC783680), mRNA. 0.0 1416 100.00 0.770894788593904 NM_004048.2 B2M Homo sapiens beta-2-microglobulin (B2M), mRNA. 4e-114 416 73.58 0.705014749262537 TCONS_00015575_3 sp|P01888|B2MG_BOVIN B2MG_BOVIN Beta-2-microglobulin; 7e-60 184 94.57 0.7109375 1 coding TAGATCGAGACCTGTAAGCAGCACCATCGAGATTTGAACATTCTTCATTTGGTATAATATCTGGAAAATTCTGTTTCCCTGCTCTTTAATACTGATATGCTTTTATGCTTTATGCACATAATCAGAAGTCATATTCATGTTACCACAAATACCTTCTTTATAATTTTACCTTGGGTGCTACATGTCCATGTTTGACCTTCCTAGGCAGGTGTCTGCAGTGGAGGTGCTGGCACCCACCAGAAGATGGAAAGCCAAATTACCTGAACTGCTATGTGTATGGGTTCCATCCACCCCAGATTGAAATCGATTTGCTGAAGAATGGGGAGAAGATTAAATCGGAGCAGTCAGACCTGTCTTTCAGCAAGGACTGGTCTTTCTACCTGCTGTCCCACGCTGAGTTCACTCCCAACAGCAAGGATCAGTACAGCTGCCGAGTGAAACACGTTACTTTGGAACAACCCCGGATAGTTAAGTGGGATCGAGACCTGTAAGCAGCACCATCGAGGTTTGAAGATGCCTCATTTGGGTTGGACTAATTCCAAATTCTGTTTTCTTGCTTTTTAACACTGATAGACTTTGATGCTTTGTGCACATAAATAAGAAACTGTATTGATGTTACCACAAACATCTTCTTTTGATTCTCTTTGTGCCTGGTTTCTCTGTAGTGTGGTCTGTGTTGGCAGTAAGCCGCAGTGGAGGTGCTATGCTGGCATCTTAGAGGTGTGGAGGGAAGAACTCTGACGTCCAACATCAACATCTTGGTCAAGTAAAGTCTTCAGGGTGTTTTGCGCACAAATTATAGTCAGATAGCTATGCATGTTTAGAGTAAATCTCCAATTTGTAATTTTCCTTAGAATTTTGCAAAATGTTGTGACAGATATTTGTCAGAATTATTGGAAATATGTTATGGTGGATGGCATTTTTTCATATAAAATTATATTTAGTTCTGTTGAGACATGGCTAAGCCTATTTTCATTTTATTTTGTTTTACTAATTAAAATGTGGTAAAACTTGATG EMBV3_38757 CTCATGGCTGATGTTTTCCTACTGGTGCCTCTCCTGATGAATCCCATTGTGTCCTGTGTG Gene GeneID:788777|LOC788777:XM_002693396:47_cdna Constitutive 0 NULL GeneID:788777 15 GENE LOC788777 NULL similar to hCG1811275 EMBV3_11030 GGGACATTGGACATGGTGCTCAACCTTTCAGCATGACAGGTTCCTCCTTTTGTAAAGTGG Gene BVT0102_233015 + 0 NULL GK000015.2:60531204-61515350 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00062018 TCONS_00062021 TCONS_00062022 TCONS_00062026 TCONS_00062017 TCONS_00062023 TCONS_00062019 TCONS_00062025 TCONS_00062020 TCONS_00062024 1 XLOC_037194 Coding TCONS_00062017 XLOC_037194 NonCoding Coding - 15:61204684-61335999 - TSS46072 873 3 TCONS_00062017_2 53 0.260022909507446 6 0.993397505216504 0.000148277155323492 0.000106443281522395 0.000336636675835306 2.76317239764799e-58 1.19404945299169e-17 4.39181204375501e-05 0.000112642672304092 5.27268443413264e-13 2.70371502272212e-35 0 6.3722137062582e-11 0 3.34998673843657e-14 7.88703564152129e-61 5.61992755797532e-06 0 0 0 0.000933404062363163 0.00032476543292592 6.25565196580385e-05 0 0 0 0.000117449582663504 5.69339054744161e-09 1.33552077213348e-11 0 0 0 0 noncoding 0 0 0 0 -0.0251285711829634 0.824644046578427 0.0540978037018889 0.515241307474462 GAGGTCCAAAGCAAGAAGCCTATAAACAGTCTTCCCGACATCTGATCTGCATCGTCCCTTCAATCCCTTCTGCCCCAGTCTCCTCAAACTGGAATTTTGACATTTGTTTGGAGAGCCTCACTTGACCTCTTTTTGGGGAGCTGAATTGGACTGAACGTGAGAATTCCCTCTGGACTTGATCTCTCAGGAGACTAGAGGTCACTGCCTTTGATGCATTATTCAATAAAGGGAAAGAAATAAGGCTGAGATCAGGCATGGCCTTCTTCATCATTGCTTCACTGTAGAAAAAACTTGTTGACCCTTCTTCTTGAGAACTATGGAGGCGTATTCCATGGCTCTGGAGCGAGTTTCAGTGTTGAGATCCTGGCTGTGTCACCGAGTAGCTGTGGGACATTGGACATGGTGCTCAACCTTTCAGCATGACAGGTTCCTCCTTTTGTAAAGTGGGATGATATTTACCTCTTAAAGTTTTCCAAATTAAGTGTACTAGTGCATGTTAATCTCTTAATATTTGGGTGATTCATTGTGAGTACTTAGTAAATGTAAGCTACAGTTATTTTTTATCATCATTATTTGTATTTTACCATTATTAAGCTTTAAGTTATTTCTTTACGTAGTCAAATTCATGATCCTTAATGTTGGGGGAAGAATGGAAGCAGCTATTCGTTGAATTAGACTTTGTATCGGTATCAAATATTTGTATTTACTCAGTATCATGCAAGCTATTCACAGTTGCCTGGTCTATTGCCTGTCTCTCCACTTACATGGAGAAACCCAACATTTTCCAATCAGTATAAATTGTTTTTCAGTATGTTTCTTTATCAACTTCTTATAGTAAGTCATTTCCTTGAAATGAATGAGTTCATTAATGGA TCONS_00062036 s 3' 310078 TCONS_00062036 s 3' 179352 EMBV3_20568 ATGGACGATTGATGACATTGCACAGTCTCTCCAGCGGTGCTCATCTCTTCTCCCAGCAGA Gene GeneID:530353|LOC530353:XR_084656:101_cdna Constitutive 0 NULL GeneID:530353 26 PSEUDO LOC530353 NULL similar to TruB pseudouridine (psi) synthase homolog 1 EMBV3_40436 GCTTTTGGTCCACAGAGTTGCTGCGTTTCGCACCTCTTTCCTGCTTCAAACCATTTCCTG Gene BVV0102_383622 + 0 NULL GK000018.2:59497071-59513752 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_24982 GACATTACAGCTCAGGGAGACCAGCCTATGCTGTTGGGACTGTGAAAGGACCTTGGAAAT Gene GeneID:511976|ITGA8:XM_002692081:226_cdna Constitutive 0 NULL GeneID:511976 13 GENE ITGA8 NULL integrin, alpha 8 EMBV3_09533 TTTGATCTTATCCAGGAAGGGAGAACATTTGCTTTCGGGAAGGTTGCCTTTCTCTGTGGG Gene BVV0102_105921 + 0 NULL GK000005.2:25744928-25778011 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00191127 TCONS_00191128 1 XLOC_116816 Coding TCONS_00191127 XLOC_116816 Coding Coding GTSF1 5:25728416-25748044 j TSS143271 4020 1 TCONS_00191127_2 167 9 0.795638661028175 0.011425664423292 0.012303298976242 0.00926595204734901 0.00584072062180124 0.00652134390378264 0.00322359263217522 0.00525365291307013 0.0085442290062822 0.00905448859844689 0.00136693785412024 0.000480829457653199 0.000535093593789205 0.00229449920214816 0.00494403271741276 0.00180912636636234 0.00490723343374586 0.00628401956029497 0.00567221952072342 0.00886629390758395 0.0125890199998757 0.00351136734156186 0.00181908439810767 0.00293959175163759 0.00411822876227219 0.010629149283026 0.0104207476983422 0.00608214869063899 0.000912742041275034 0.000519087825551481 0.000592874144251276 XM_005206103.1 GTSF1 PREDICTED: Bos taurus gametocyte specific factor 1 (GTSF1), 0.0 6776 100.00 0.934328358208955 NM_144594.2 GTSF1 Homo sapiens gametocyte specific factor 1 (GTSF1), mRNA. 0.0 908 85.95 0.197512437810945 TCONS_00191127_2 sp|Q3SZU0|GTSF1_BOVIN GTSF1_BOVIN Gametocyte-specific factor 1; 4e-125 353 100.00 0.994011976047904 1 coding 0 0 0 0 -0.106559864434094 0.475442582032262 -0.0186048397279731 0.791196730419176 GGGAAGGCAGCGCGAGTTCCAGGCACGCAAAGCCACTGTCATTCCAGGTGCCGGAGGACCACCTCCCGAGAGGAGGATGGGCGGAAACCAAGAAGGGAGTGCCAAGAAGGCAGTCATCCGAGCGGCCCGCACCCGCTGCGTCACAGGAAGTGGGGGCCCCACCCACTAACGTCAGAGGCCGGAAGGGAGCGTTGCTGGGGCACGGGTGTGAGCGAAGGCGACCGTGGGGCGAGGAGAGCGTGTCTCCGCCGAGCACTTTGGATTTGGCTCCTTAATTCCCAACATGGAAGAAACTTACATCGATACTCTGGACCCTGAAAAGCTGTTACAATGCCCCTATGATAAAAACCACCAGATCAGGGCCTGCAGGTTTCCTTATCATCTTATCAAGTGCAGAAAGAATCATCCTGATGTCGCAAACAAACTGGCAACTTGTCCCTTCAATGCTCGCCATCAGGTTCCTCGGGCTGAAATCAGTCATCATATCTCAAGCTGTGATGACAAAAGCTGTATTGAGCAGGATGTAGTCAACCAAACCAGGAGCCTTGGACAAGAGACTATGGCTGAGAGCACGTGGCGGTGCCCTCCTTGCGATGAAGACTGGGACAAAGATTTGTGGGAACAGACCAGCACCCCATTTGTCTGGGGCACAGCCAACTACTGTGGCAACAATAGCCCTGCAAGCAACATAGTTATGGAACATAAGAGTAACCTGGCTTCAGGCATGCGTGTTCCCAAGTCTCTTCCATATGTTCTGCCATGGAAAAACAATGGAAATGCACAGTAACTGAATATTTCATCAAATGCCAGACCCTGGAAGACTTTTCTTCCCGCTACAGTGTGTTCTTCATTTTTTTTCTCCTAATCTAATTATAGAAAGATAAACTGTCTGTGACTTGCAAACTGACAAGTACCTTTTTTTTTTCCCCTCCCTGCCGTGAGTCCTTACTCATTTGATACAAGAAAAAACCCTCATGCTCAGAAGAAATGTTTCAAGTAAACCATCATTGTAGACAGCTTGATAATTTGGTTAAGTGCCTGCAGCCCCAAGATCAGAATTCATATCCCATTCTGCATTAATGAAACAGAATCATCTAAAGTTACCTTAAAGGATCCAGCTAAAGCAGGCAAGAAATTTGGATTGGAAAAAGTAACTGTGTTTGTGTTCTCTGACTCACATGAACCAAATTCCTTCTAGCATTTATAGGAATGGACCTTTTCTGTTTACTGAGTCTTTGATGTTGATAGCATTTATATATAGAAATATACCCCATTCTTATTTAGAATCCTTAGGACATCTTGTTCCCTAAACTTTTCTAACTTAGGATAGGTTTCTTTTCTCTTTCCCACATTTCAGCTAGAAATTGTACTAGCTGTCAAGGTAGGTGTGGATTATGTAGGAGTGAAGATTAGAATGAAGAGGAGGAACCAGTGTACATGTGGAGAAGAGATAGGCTTTCCACCTGTGTGTGAAATTTGATTAAGCTCAAAGCTGAAATGTGTGAAGGCCCTGGGACGTGTGTGTAAAAAGTTAGATTTCTGAAATACCCAAGGCTCTGGCTATCCTAGCATCTTTTTGGCCCTCAAAAGGAGACTTCATAATCTCCCAGACTAGTTCTTTATTTGGTTGGTTGGTTGCAGATTTGGTGTGGTTTGAGTTTAAAACTGTCTGGCACGGGAAGGGATTTGCGATCTGGTATAGATAGGGACTCAGAGGAAGCATACTGACCAGTAATAACAAAAGTGATCTCTTGAGCATTGTTTGTAGGGGAAATGGGCTCTTATGGAATGCTTCTTCCACAAGTTTCATGCAAAACAGGATTCTCTCCTAATGAAGCAAAACTATCTGTTTATTTAGTTCCAACTTCTATAGACAGATTCAAGATAATTCTGCTTCTACTGGTATAAATAAGTGAATAAACTATTTCTTCTGGAGAGGGTGATGTGGTGTATTAAGGAGGAGGAAAAAACACCCATTATGCCCCTAATTCTGGTCACTTAATGTTTGTCAGTCAACAGCTCACAACACTTTAACTTTATTTAAAAATAGTTTTAACTGGAAAATACAAAACCCTTTTGATTTCATTTATTTGGGTGATAACAACCCAAACTGTCTATATTACACTTGAAACCCAGAACTCCTACCAAGTTTAGGAAAAACAGAAGTATGAGTCTTACTGCAAAGAATTAGCTACTTGAGTATAACTCAAAGAAGGGATTAAATAGAAAAGAGTTACTTTGTGGTTTTTAAATATCTAGAGAGGCAAATTAGGCTAGCATCTATCATTCATGAAAAACCTTATGTTGTTATTTTAGGACACCTCTTTGCTCACCAGTTCTAGAACTTAACCAGCAATACATGTGACCTATCCAAGTGTGAATAACACTCACTATAGGTAAATGCCTGCCTATATTAATTTTGTTAGCTCACAGAATAGACCACCCCATTGTCTCTTTAGTAAACTAATGATTAAAGCAGCCAGTTTGCTTAGGATTTTTTGGGGGCCTAGGGTACACTCGTTTGGATTTAGTTTGCTGGAGATTTTGGACATTCCCAAAAACCAGAGCAAAGAAGTGCCTTGAATTCTACTACTGTCAGAAGTTGGGAGGTGAAGCTTGCTTATTTTTGAGACCTTTTTCAGAGGCTACCTTCTGTTTGGAATATGAACAGTGGAAAGTAAACAGTTGAATATTCTACCCTAATTTCAGTGAAGGTCAAGTGTTATGGTTAAAGGTTAAATGTAGACATGTTTCAGAAGCTTATCTTAGCCTTTGAGTTCTGCATTTTGATCTTATCCAGGAAGGGAGAACATTTGCTTTCGGGAAGGTTGCCTTTCTCTGTGGGTATTCTAGAAGTGCCATTGTGATTTGCAAATGTTCTTACCAGGAATAAACAAATGTAGGTAGTAAATGATGCTTAGGTCTCCCGAGAGCTGTACTTGAGGTAAACAAGGGGAGTATTCGGGTTCAGTTTCAAATAGCGCACTGCAGTACCCCTTCATTGGCGAGACAGAACAGTAGCCGCTTGTGTTAGTCTCTTACACCCGTACTGGCATTCCGAGAGTCCTCTATTGTACTTTTCACCATTCATATTACACTCCAAGGTAGACAAAGACTAAAGGGATGATGTTACACTTCTTATTACCATTTGTAAAGAGGCAGGTTATAGAAATCAAGGTGATTTGAAGCAGGACTGTCCTTGGGGAGAAGATACCTCTTAGAAAATACGTTTTCTTATGCCAGTTCAATGGGTAGAATAAGGAAAATGACTTAAATTCCATGAGAAAATTACTATAGTGACTGCTCATTCTTTTGACCACTGTCTTCCTGGTACTGTTCAGGTTCAGAACATACTCACATCCTACTTTATAGGTGTGGCTTCTTCAAAAGCCACTGAAAACACATTAACCCGTTACCTTGTACCAGTAGTCTCAGCTGACTTATTCCAGCCATACTGAAGTCTGAAAAACACAGACCTGTGTATGGGGTGGGGGGTGAGTATTATTTTGCCCTTGACACAGCAATTCCACTGCCAATTTACTTAACTCTGAACAACTTGGTAACTGCTATAACAAATATAAAATCTCAGGTTGTAACAGCTAGGAAGACCAGCATCCTAGGCTGGACAGTAACCCTGGAGAAAAGCCATATGGTCAGCAGATTTGCATTCGTGTTTACCTCATTAAAAGGTGGTTTTTTGTGAAACTAAAATAGTGTGAGCACTTTTGATGAACATTGAAAAGACATTCAGTTGTTTTACTTTAGTCTACTTACATATACACATATATATGGAAGAAATGAATCTATGTTGTATTAAAAACTACTACATATGAACCCAACCACGCCTCTTAATTTTTATTAAAATACTTGTCACTGAAATAAAGTATACTTTCCCAGCTCATCTGTTTCTGTCCTGTTTCCTCGGGCGTTTCAGGATTTCATCGGACAGGGTTAGGGGCTTAAATTATTTAGCTCCTTGTGTTGGTTTTCTCTAGAGTAGAACTTTATAGCAGAGGTGCA EMBV3_37971 ATGAGGGAGGGGCTGTGTATGTTTCTGCTGGCTGGATCTTGGCTCCTCTCTTGTGTCATT Gene GeneID:787249|LOC787249:XM_002683723:5_cdna Constitutive 0 NULL GeneID:787249 11 GENE LOC787249 NULL similar to Olfactory receptor 1J4 (Olfactory receptor OR9-21) (HTPCRX01) EMBV3_00185 TCAGGCTTCGCACAGCATGGCTTCCCTCACTGTTCTAATCTCCGAAATGGCACGCTTTCA Gene BVV0102_016669 + 0 NULL GK000007.2:49392566-49614886 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213365 TCONS_00213371 TCONS_00213369 TCONS_00213372 TCONS_00213375 TCONS_00213368 TCONS_00213374 TCONS_00213366 TCONS_00213370 TCONS_00213373 TCONS_00213367 1 XLOC_130436 NonCoding TCONS_00213369 XLOC_130436 NonCoding NonCoding - 7:49457654-49496367 - TSS159854 690 2 TCONS_00213369_1 41 0.330434782608696 4 0.982279396569539 0.0152438006065472 0.014117803988664 0.0163683382254604 0.0078287996844421 0.0110308081447191 0.00261665480636971 0.0020293902103704 0.00846539841540538 0.00189183748940943 0.000160189598624708 2.4584689624627e-06 1.5177156063107e-17 0.000989700558837322 0 0.00029644664736914 0 0 0 0.0250965374233112 0.0392060723115536 0.00899679793164448 2.00192931881905e-54 0 0 0.00269565825659976 0.00513662240300719 0.00511806894997287 0 0 8.92118568963827e-05 0 noncoding 1 0 0 0 -3.80107231870707 0.00975425766995531 -0.357877552250538 0.000394225866825316 GGTTAGGAATTCAGGAGCAATTTAGCTGGGTGCTTCTGGCTTGGTGTCTTTCGAATCATGCTGTGGGCCAGGGCAGAAGTCAGTGAAACGTGACTGGGGCTGGAGGTTCCTCTTCCAGGCTCATTCATGCAGCTGTCGTCCAGAAACTGCCGTGGCACCATCTCCTTCAGGCTTCGCACAGCATGGCTTCCCTCACTGTTCTAATCTCCGAAATGGCACGCTTTCACTTCGTCTCTCTTCTCTTTGTAAGGAGCCAGTCACTTAAGTCCAGCCCATGCTCAGGAGGAAGGAAGGCAGCCACCATGTAAGTGGAAGTCCCCCGGAGAGTCAGTAGAAGGGAAGAATGGCTTGATTCCTGCCCCCATCTCTCGGCCAAAGGATCCTGAGGAAAGCAATGCTAACTCTTGGCAGAAGGGACATCCAGCAATCAGCCATCTCTCTTACTTTACAGATTTGCTTTAGCAGAGCCAGATCGTCATCAGTCTACTCAGTTTGGATTTCCAGACATGTCTCCTGATATGGGGACACCTTTCCAGTTGCAAAGCCCAGAGCAATGTTGAGAGCTCCACAGATGTTCATCCTTGGCAGTCACTTTCATCCTTGCCCTGTTCCTCTGTTCCTTGAATTTTCATGATGATTTCTAATGTCGAGTAACTTGACACTTCATTTGGCTATTCTGCAATGAAATTG TCONS_00216983 r 5' 57184 TCONS_00216983 r 5' 57184 EMBV3_22738 GATTTCCCTTCCTAACATTCAGCCCCACCCTGGATGCTGTGTTCTTATGGCAACTTGGTC Gene BVT0102_114014 + 0 NULL GK000018.2:58242757-58268988 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26250 TGGGAGTGGAACTGAATTTACAATCTCAACCTAGATTGTTCACAAAACTTCATAGATTGC Gene BVV0102_139422 + 0 NULL GK000015.2:4914792-5296673 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38435 AGATCCTCAGAATTGAAGAGGAACTGGGCAGCAAGGCCAAGTTTGCCGGCAGGAGCTTCA Gene GeneID:281141|ENO1:NM_174049:7_cdna Constitutive 1 NULL GeneID:281141 16 GENE ENO1 MGC127526 enolase 1, (alpha) EMBV3_12052 GCGAACGCTTTAGACAAGCGCCAAGCCCATCTCTGTGTGTTTGCATCCAACTGTAATGAG Gene GeneID:784738|LOC784738:XR_084082:7_cdna Constitutive 0 NULL GeneID:784738 26 PSEUDO LOC784738 NULL similar to 40S ribosomal protein S12 EMBV3_10418 TTTCTGTAGTTGCAGCAAGGTGGGGGCTATTCTCTAGTTGCAGTGCGCGGTGGCTTCTCT Gene BVV0102_292717 + 0 NULL GK000028.2:13916659-14264892 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06902 TTTGTGGAGCTGAGTGAAGCATACCAAGTGCTGAGCCGTGAGCAGAGTCGCCGCAGCTAT Gene GeneID:533579|DNAJC4:XM_002699327:171_cdna Constitutive 1 NULL GeneID:533579 29 GENE DNAJC4 NULL DnaJ (Hsp40) homolog, subfamily C, member 4 EMBV3_37165 CTGATGAAGCAGCAGGAGACCCACCTGAAACAGCAGCTTGCCCTGTACACTGAGAAGTTT Gene GeneID:511331|TXLNA:XM_002685068:188_cdna Constitutive 0 NULL GeneID:511331 1 GENE TXLNA NULL taxilin alpha EMBV3_33706 GCACCACAGCAAATGACTTGTCCAAAGTGAGCTGATGTACATCTAGATCCTGACGGAACC Gene BVT0102_423202 + 0 NULL GK000013.2:52814159-52826625 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00045488 TCONS_00045491 TCONS_00045489 TCONS_00045490 1 XLOC_026445 Coding TCONS_00045488 XLOC_026445 NonCoding Coding - 13:52821292-52823318 - TSS33177 1125 1 TCONS_00045488_4 110 0.619555555555556 2 0.445432098765432 1.20893466709753e-05 1.29263233439657e-05 0.000120269690805738 1.38452392887603e-10 4.0482559637628e-10 4.89403788426258e-11 1.3869846700897e-10 5.25572296200872e-06 0.0002703264143429 9.12967972736088e-07 0 0 0 0.000112894183606181 1.37981443449287e-06 1.20808274646613e-10 0 0.00162812074058629 0.00018561960700865 9.7443052248002e-10 4.76749620560939e-12 0 5.05564062636756e-05 0 4.00289900444702e-05 2.4818269708708e-11 1.82062327603971e-17 0 0 1.60327114195524e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 2e-155 553 85.36 0.419555555555556 1 noncoding ATGCGGGAGGGTCCCAGAGGACGGTGTCAAGGGAGCTCACAAAGCTGCGGGCGCCACTTCAGCTAGAGGTGGTAAAGAGCTGTATTTTGTGAGGTTCCGTCAGGATCTAGATGTACATCAGCTCACTTTGGACAAGTCATTTGCTGCGGTGCAAACATCTCTATTACCTTTCAGATATTTTCATCTTAAAAATAAAAGAACTTAAGAGGTGTAGCTTTTACCATATTTTCTGGCCTGTGTCTTCAAATGTCTAACCAAAATACAGTTTTAAAACTGATATGTGATACTGCATACTTAAAAATATTTGTAACATATATGAAAGTTGTAAAGCCCTCTAAGCCCAAAGATACCACTTCCGTCTAAAAGCCAGAAATAAGAGGATAGGACCTCTTTCTTCATGTTCAACTTCTGATTTGTACCAGCCGGAATTCACAGACAATGACATATGGAAATGCTGCTCACTGGTACCGTTGACTGGATTCTGATTTTGAAAGAACTGCTTCTAAGTTTCCACCATTGAGAATTACTGTCAAGTTTTGATAGTTCACCTTTATCCAGTCAAATTCCCTTCTATTCCTAGTTTGCTAGCAGTTTTGATCATGAGTGGAGGTTAAATGATAAAATTTTTTTGCATCTACTCCAAGGACTATTTTGCTCAAAATTCTCCAAGCCAGGCTTCAACAGTACATGAACCATGAACTTCCAGATGTTCAAGCTGGATTTAGAAAAGGCAGAAGAACCAGAGATCAAATTGCCAACATCCGTTGGATCATTGAAAAAACAAGAGTTCCAGAAAAACACCTACTTCTGCATTATTGACTACACCACAGCCTTTGACTGTGTGTATCACAACAAACTGTGGAAAATTCTCAAAGAGATGGGAATACGAGACCACCTTACCTGCCTCCTGAGAAATCTGTATGCAGGTCAAGAAGCAACAGTTAGAACCAGATGTGGAACAACAGACTGGTTCCAAATAGGGAAAGGAGTATGTCAAGGCTTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGAGCACATAATGCAAAATGCCAGGCACCAGTTGGACTCAAGATTGCTGGGAGAAATATCAATAACTTCAGATATGCAGATGACACCAC TCONS_00045491 s 5' 0 TCONS_00045491 s 5' 0 EMBV3_09753 CCACGACGTGGTGCAGAACTTCTACAACCCGCTGCTGCCCAGCGGCATGAAGTTTGAGAT Gene GeneID:783180|CLDN14:XM_002685153:125_cdna Constitutive 0 NULL GeneID:783180 1 GENE CLDN14 NULL claudin 14 EMBV3_11532 CTGCAGGGAAGTCGGAAGAAGGAAGAAGCTACAGAGAAGCTGTGGTTGAACACTCATCAT Gene BVT0102_208585 + 1 EMBV3_40660 GK000013.2:82402818-82651609 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00044213 TCONS_00044212 1 XLOC_026151 NonCoding TCONS_00044212 XLOC_026151 NonCoding NonCoding - 13:82423491-82478186 - TSS32549 1760 4 TCONS_00044212_5 54 0.18125 3 0.967875818188467 4.57195215852323e-09 3.34914935092127e-09 4.67336866545957e-05 2.61984156636358e-09 1.84113374330074e-10 1.15497110978867e-09 0.000205293125916071 1.56127417098183e-08 0.000139693330161545 1.34966326484411e-09 7.54556339576185e-10 0 0 1.53163280991176e-09 2.9629056534646e-05 0 0 0 2.38672105808773e-09 0.000233846771138593 0.00103536156766711 0 2.95963161306871e-09 0 0 2.13508067754395e-09 2.94625961348116e-05 0 0 0 0 noncoding GAGGGGGGTGGGGCAGGCTGCTTAGAAACGGTGACGTGTGAGGCCTGCAGGGAAGTCGGAAGAAGGAAGAAGCTACAGAGAAGCTGTGGTTGAACATTCATCATTCACTGAGCGTTATTACCAATGATCACACCGTACATTCACCAGCAAGCCCAGAAATGAACAGTCAGATGAGGAACCTGAGGCACAGAAGAGCCAGTAACTGGTCCGACTGCAGAGAGCCAAGAAGGGGCCGTAACTGTAAACTGAAGTCATGGACTAGTCATTCATCATCGGCTTTGGCTCAGTGACTTGAAACTGAAGGCTCAAGAGAAACAAAAGCACTGATTGTGCAGAGGTGGCCGGACACCCAGAGCCTCAGTGAAACCGACCAAAGAAGAAAGAAGTCGGACCTCATCTGTGTAGAACTTCTGCAGAGATAATTTGCGTTTTAAAAGTAGCTTCTTTTCCACTGAGACTTCTATTTTGGAAATGTATTATGGGCGCTTTTTCATCTGTTGATCTGCTAAATCTTCATTTAACAATCATAGAATGGTGTTTAATGACAATAAGACCGTTGCTTTCTCTAATAAGAGTTATTTTAATTTATGAGGATTCTGTAAATGTGTTCTAATGCTAGTAATTTGGTGTTTGAAAGTGGGGTTGTTAAACTAATGGATAAGTAGCAAACCTGAATTTGCCAGCAAACATTATTTTTAGACACAAAAAGCCTTCTTGAGAATGAAGCCAATCCTAGCAAAGTAGAACCTGCAGATTGATAGTACTTGCTCACATAATTTAAGCCTCTGAATACAGCTATACCTGAAGCTGACTATTTCTCACCACATGAGCCAATATATTCCAGCTTTTTCTTAGGCAATTTTGAGCCAGATTTCTGTTACTTGCTATCAAGAGCTCTTATTAATGTATTTCCCCAACACATAACCTGCTTCTGTCATTTTTCACACTGAAGTTATCTAATTCAGTCTAAAAAGTGAAATTTCCAGGGGAAAAAAGATGTTGCTTATGTGTCCTTCCATTACTTAAAAGATCCATCTGGAGTTTATTTTAAATAATACACATATCTTTCATTAATACTTAAAATAATGCTGTATGCTTTCAGCATTATGTAATGCAAACAGAACCAAGATTATTACTTAATACAGCTGCTGAATTTGTCTATTTACTTACTAGTTTAGCTGTTTCTCTCCCTACCTGTTTTCCTAAGACACTGTCATATTACAGCAAACATTTAAGATACAAGGGTGAAGAAAAATAGCAAAACCTAAAAGCCTGTGGTAAGATGAAGCCAGAAGAAATGCAAAAAAAAGCCCTACCACATACTGATCTATATGCTTACTCAACTATTATTATTGATCTATACCCTCACAAAGTTTGTGGCTGAGGCACAAGTTGGGCTCTGAGCTTCCAGCAGGCAATGAGAAAACAGAAACAGATTCCTGGCCTTCGTTTAAAGATTACTCAGTGTGTCCAGGGGTTTCTATGTGTCTTTTTCTAGTAGAGGATGCAAAAATTTCACTTAAATGCTGTTTCTCAAGAAGATGAGAAGGTGGTATCACAAATCCGGTTCAGCGCACATGGGTATTTAAGTGAGATTTTCTGTATTCTCTTAATGGAACGTGATGCGGTCCCACAGCCCCCTTCTGCTGACCTCTTGAAAATACCTTGAAGAACAGGTGGACAAACTGGGATTCACGCGTGTCTTTGCTGAATATTATTATCTTGGCAGCTTTTTAATAAATACATTTGTAACAGGCTGT TCONS_00044204 TCONS_00044205 TCONS_00044206 TCONS_00044207 TCONS_00044208 TCONS_00044209 TCONS_00044210 s 3' 20673 TCONS_00044204 TCONS_00044205 TCONS_00044206 TCONS_00044207 TCONS_00044208 TCONS_00044209 TCONS_00044210 s 3' 20673 EMBV3_25158 ACAGTGGTGTTGTTCGCAGCTCTCAGGCGGCAGCGGAAAAAAGAACCTTTGATCATTTCC Gene GeneID:537946|CDH6:NM_001034640:60_cdna Constitutive 0 NULL GeneID:537946 20 GENE CDH6 MGC128952 cadherin 6, type 2, K-cadherin (fetal kidney) EMBV3_13400 AGGCTCTGGGGCTTGAACCAGTGATGTTGGAAGTCAAAGCAGAGCTATCTACCCAGCAGT Gene GeneID:507692|C18H19ORF63:NM_001080239:148_cdna Constitutive 1 NULL GeneID:507692 18 GENE C18H19ORF63 MGC154997 chromosome 19 open reading frame 63 ortholog EMBV3_29422 GTTGATCATTTCATCTGTGATGCTTCTCCCATTCTGCAGCTTTCCTGCACGAGCACTCAC Gene GeneID:613564|LOC613564:XM_002687598:691_cdna Constitutive 0 NULL GeneID:613564 5 GENE LOC613564 NULL similar to olfactory receptor MOR112-1 EMBV3_29788 TTCGGATCTCGCTCAGCATCACAAGATACACACAGGGGAGAAGCCGCACGAGTGTCTCGA Gene GeneID:100294758|LOC100294758:XM_002692578:286_cdna Constitutive 0 NULL GeneID:100294758 14 GENE LOC100294758 NULL similar to zinc finger protein 347 EMBV3_35780 ACGGACTTCACTTTCTGCAACAAAGCTGCTTAAGGATCGAATGATATTTATTGAATGAAA Gene GeneID:616226|COMMD6:NM_001113312:8_cdna Constitutive 0 NULL GeneID:616226 12 GENE COMMD6 MGC137215 COMM domain containing 6 EMBV3_16452 CTCTGGCAGTGAGAGAATGAGTGAGGAGGAAATCATGCAAGAACCAGAATTCCAGGGACC Gene GeneID:539463|ZKSCAN2:XM_002698002:103_cdna UTR3_Alt 2 NULL GeneID:539463 25 GENE ZKSCAN2 NULL zinc finger with KRAB and SCAN domains 2 EMBV3_32020 CCAGAAACATATCCATTTAATCCCCCTAAGGGCAGCAGCAATGACTCTGCGCACGGTATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09818 GGTGGTGCCCAGGCTTCCTACATAAACCCAGTTTGCTGTGAACCTTCAGACCGGCTATAA Variant GeneID:510813|LGALS9:NM_001039177:233_cdna 76^167 3 EMBV3_07002 GeneID:510813 19 GENE LGALS9 MGC129126 lectin, galactoside-binding, soluble, 9 EMBV3_05819 TTCAGTCACCATGTCTGGAATGCACCGAGGTGAAGAAGTCCGATTTGGTTCCATCCACAG Gene GeneID:614115|SRRM4:XR_083906:658_cdna Constitutive 0 NULL GeneID:614115 17 PSEUDO SRRM4 SRRM2C serine/arginine repetitive matrix 4 EMBV3_36493 AAAAAGGTGTCCGCCTCCGGCTTTGCGCAGGCCAACTACACGGACCCGCAGAGCAAGCTG Variant GeneID:533426|INO80C:NM_001105404:97_cdna 158^448 1 EMBV3_14941 GeneID:533426 24 GENE INO80C NULL INO80 complex subunit C EMBV3_13104 TGGTACCCCAGCAAACCACTGAAAGTGAAGTACCACTGCCAAGAGCGACAGACACCAGAA Gene GeneID:510102|RARRES1:NM_001075430:124_cdna Constitutive 0 NULL GeneID:510102 1 GENE RARRES1 MGC142566 retinoic acid receptor responder (tazarotene induced) 1 EMBV3_20104 ACAAGGGCATTGGCATCCTCAACACTGTCATCAGCCCCATGCTGAACCCACTCATCTACA Gene GeneID:538966|LOC538966:XM_002695735:410_cdna Constitutive 0 NULL GeneID:538966 19 GENE LOC538966 NULL similar to olfactory receptor MOR255-2 EMBV3_40217 GGCAGCCAACTGATAATTCACTTGCCACTGGAAATGGGTCTGAGAATGAAGCCACAAGGG Gene GeneID:522938|LOC522938:XM_002700338:83_cdna Constitutive 0 NULL GeneID:522938 X GENE LOC522938 NULL similar to Family with sequence similarity 48, member A EMBV3_37433 TGAATGGATGGGTTGATCGAACTATAGATAAGTAGATAGTCCATGTGGCTACCACCCACA Gene GeneID:519670|KIN:NM_001101099:11_cdna Constitutive 1 NULL GeneID:519670 13 GENE KIN NULL KIN, antigenic determinant of recA protein homolog (mouse) EMBV3_27136 TGATCCATGGCCCAGCAAGACCAGTCACCAACATCCAAAAGTTCATCCACGCTATGCCCT Gene GeneID:337907|PAG11:NM_176623:25_cdna Constitutive 1 NULL GeneID:337907 29 GENE PAG11 NULL pregnancy-associated glycoprotein 11 EMBV3_39731 AATGCTGGCTTCCTCACCAAGTGACCAATGAAGTTCCCTGAGGAATTCCCATCCCTACTC Gene GeneID:281645|BFSP2:NM_174248:7_cdna Constitutive 0 NULL GeneID:281645 1 GENE BFSP2 NULL beaded filament structural protein 2, phakinin EMBV3_12656 GAGAGCCATGAAGGACATCCACTATTCAGTCAAACCCAACAAGAGCACGAAACAGCAGGC Gene GeneID:513237|SBDS:NM_001034439:314_cdna UTR3_Alt 2 NULL GeneID:513237 25 GENE SBDS MGC129036 Shwachman-Bodian-Diamond syndrome EMBV3_04479 CCTTACCTCCTTAACATCTCTGACCTTATCAGCATGAAGACGAGTTTAATTTCAGATCTT Gene BVV0102_311804 - 1 EMBV3_13461 GK000001.2:32837552-33361649 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20871 CGAGATGAAGAGAGAAGAGCAAATCCTATTTTGTGCAACAGAACGCAGCAACGTGGCGTC Gene GeneID:614589|ZC3HAV1:XM_002686998:862_cdna UTR3_Alt 2 NULL GeneID:614589 4 GENE ZC3HAV1 NULL zinc finger CCCH-type, antiviral 1 EMBV3_28490 ACCAGCTACGACACCAGGAGTGGGCCCCAGGAGTCAAGACTGTGGAGTCGGCAACCGACA Variant GeneID:281897|LAMP1:NM_001075124:33_cdna 284^500 1 EMBV3_16404 GeneID:281897 12 GENE LAMP1 MGC140501 lysosomal-associated membrane protein 1 EMBV3_31772 AAATCTGGTGCATCATCTGGAAACAGAATCAGGGGTCGTCACTCTGGACCCTCAGACCGC Gene GeneID:540074|TRIM15:XM_002697340:287_cdna Constitutive 0 NULL GeneID:540074 23 GENE TRIM15 NULL tripartite motif-containing 15 EMBV3_31704 AATCTGCTGACCAAAGAGCAACTGAAACAGATTCCTACCCACGACTATCGCAGGGGAGAC Gene GeneID:516790|LOC516790:XM_002696427:9_cdna Constitutive 0 NULL GeneID:516790 20 GENE LOC516790 NULL similar to ring finger protein 167 EMBV3_17893 AAGAAACCCCCAAGCTAAAGCTCAAGTGGAAGAGCAAGAAGGAAGCTGAGTCACAAGGCG Gene GeneID:524795|DNAJC17:NM_001046276:166_cdna Constitutive 3 NULL GeneID:524795 10 GENE DNAJC17 MGC137242 DnaJ (Hsp40) homolog, subfamily C, member 17 EMBV3_30755 TACCAACTCCATCCTCAACTCATGAAAGCAGGACAGATGTAAGCATCCACTAGGCTGGCC Gene BVT0102_113349 + 0 NULL GK000030.2:131215851-131499790 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00248337 TCONS_00248336 1 XLOC_151571 NonCoding TCONS_00248336 XLOC_151571 NonCoding NonCoding - X:131433318-131457948 - TSS185756 606 1 TCONS_00248336_2 148 0.366336633663366 4 0.975557269885095 0.000426578442260014 0.00051422709340664 0.00196532598204518 0.000260359730990212 0 0.000265621250747862 1.44325434734739e-05 0 0.000117177111923443 0 3.77662173752971e-06 0 0 0 0 0 0 0 0.00174145371519333 0.0021473421076149 0.000602196131090548 0 0 0 0.00148592334887899 0.000701833053999604 0.00294037287396209 0 2.40325153659508e-05 3.30449747469646e-06 XM_590258.7 SHC3 PREDICTED: Bos taurus SHC (Src homology 2 domain containing) transforming protein 3 (SHC3), mRNA. 7e-13 78.8 85.51 0.112211221122112 0 noncoding 0 0 0 0 -2.01958385356851 0.00853575956756371 -0.00508313017480971 0.913519437847104 ACCACACACCCCACGCCCTGCCCGCTGCCATGTTCTGCCCACTGTCTGTCACTGCACAAGGTGGGGTGTTGTTCCAGGCCCTTGCTTCAGACAGGCACCCTCCCCCTCTCCTGAGGAGTGAAGCCTGCCACCATGCCCTGCCTCCCATCAGCCCACACGGTGGGGTGTTCCCCCAGGACCTTGCTTCAAACAGAAGAGATGCAACAAGTCCCTGTGAGGGTTCAGAAGGCAGCTCCTCAGCAGCCACACCCCCTCAAACATGTACATTGTTCCATGTACAGTTCTCAGTGTTGCTTCTTGACCTGGTTTCTCAGGAGACAGGCATGAGCTGTAACAACAACAACAACAGAAGCATGAGCTATGACAGGCTTAAAGCAATGCTTTGGGCAGTGTCAAACACACACATCCACCCACCCCTGTCCTGCCACCTTACTTACCAACTCCATCCTCAACTCATGAAAGCAGGACAGATGTAAGCATCCACTAGGCTGGCCTCAATGGAAAGAACAGATTTTCTTCAGCAAAAGAAATTGAAAATAAAAAAAGGAATTTTGGATCATTATTGTTTCTATTTGTGAGAAAATCATTGTTTTCCTGAGTCACCAC TCONS_00245735 r 5' 66188 TCONS_00245735 r 5' 41843 EMBV3_30846 ATGGATCTATGCAAAGAAGTGTAAAATCTCGTGAAGTCTCCCTCCCATGTGCGCGCCACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08082 GGAAGATGAGTCACATACCTAAGTACAGGTGAAGCAAGCACTGGTCAGGCAGAGGATGGA Gene BVT0102_136341 + 1 EMBV3_02317 GK000022.2:39502562-39766370 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20394 TGAGCTCGCGGAGTAGACATGAGCAAAGCACACCCTCCCGAGTTGAAGAAATTTATGGAC Gene GeneID:522621|SNRPG:NM_001040543:44_cdna Constitutive 0 NULL GeneID:522621 11 GENE SNRPG MGC128652 small nuclear ribonucleoprotein polypeptide G EMBV3_22761 CACGTTTTAGTGAAAATGCATGACTTTCTGATCAGATATGGGGCTCTTTGGGCATAGATG Gene GeneID:510507|LOC510507:XM_002692665:17_cdna UTR3_Alt 2 NULL GeneID:510507 14 GENE LOC510507 NULL similar to cholesterol 7alpha-hydroxylase EMBV3_07074 CTTGAGTATGAGGTAATTTGTTCCCATAATTGGATTCTTTGGGAGCATGAAGCCTTCAGG Gene GeneID:782916|ERCC6L:NM_001102530:14_cdna Constitutive 0 NULL GeneID:782916 X GENE ERCC6L MGC152513 excision repair cross-complementing rodent repair deficiency, complementation group 6-like EMBV3_31776 CACGGTGCAAACGCAATCCAGTTACGAATTCACACAGCGACGCGGAAATCCTACAGACCA Gene GeneID:535026|CHD2:NM_001102181:47_cdna Constitutive 0 NULL GeneID:535026 21 GENE CHD2 MGC148727 MGC159952 chromodomain helicase DNA binding protein 2 EMBV3_09089 ACACATGGGACCCTAGAGGCTTGGTTGTGTTACCAGTGTCGAGCTGAAACAGCCCATTAG Gene BVV0102_141269 + 0 NULL GK000024.2:44024554-44291751 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00139150 TCONS_00140368 TCONS_00140370 TCONS_00140369 TCONS_00140371 2 XLOC_084812 XLOC_085112 NonCoding TCONS_00140371 XLOC_085112 NonCoding NonCoding - 24:44076953-44083388 - TSS104785 935 2 TCONS_00140371_1 48 2 0.854989120298415 0.00529105872012488 0.00332996478371154 0.00177885395113517 0.000822616029152896 0.000504531265517495 0.000144253846046008 0.00171567571417153 0.00112887261936254 0.00138925968287672 0.000409389582065975 1.91942053391159e-05 6.88012089732935e-05 6.93726106408811e-06 0.000568501307919365 0.000178407304248469 0 0 0 0.00361457076471102 0.00846058973638821 0.00169142211316783 0 9.73095764877819e-06 5.49984166795179e-12 0.0043506034632949 0.00420493791340546 0.00469780161900876 1.53322006625475e-115 0.000175483158641693 8.14687267037904e-36 XM_005204846.1 CCDC23 PREDICTED: Bos taurus coiled-coil domain containing 23 (CCDC23), 2e-130 470 79.64 0.571122994652406 NM_199342.3 CCDC23 Homo sapiens coiled-coil domain containing 23 (CCDC23), mRNA. 1e-75 288 74.41 0.479144385026738 0 noncoding 1 1 1 1 -0.299077772896892 0.0518779006733872 -0.0731820575523177 0.317469927317833 GGTAAGCCAATCATTGCCCATCCAGGCTCGTGGTTTCAGAAAATGGGCCTCTGTGTGCCGGCCAAGTTTCCAGGAACAGGTGTGGGTCCTATGGGTCAGGATGGACACAGGGACACAGCTCTGGCTTGTTTTCTAATCATTTTATCTGGCCCACAAGTGGGAGAGAATTTCAAGAAGACCGTCTCTTAATGAGAGGAACCTAGGGGTCAGGGAGTGGAGGGGTGGTGGGTGGAGATAGAGGCCCAGTGCCCAGGTGCTATGGAAGCCTCTGGAAGACCCGCTGGAAGGAGGCCGCACACAGTGAAGCCCGGGGTCACAGACCTGTCCAGAAGCCGCTCTTTGTTACCTCAGGTCCTGCTCTGAGGGGCTCAAGATCAGATCTGTCCAACAGGTCAGCGCTAAGAAGTCTACAGAAGCCAAGCCGTGGATCCACCTGCACATAAACAAAAACCCAGAGTTAAGGAGCCGGTCAGCAGAGTGGAGAAGACCAAGCAGAGGTCCGCCCAGCAGGAACAGAAGCAGACAGAGAGCAGAGGTCTGTGCCCTCAAGAGTCACGACAGGACTGGGGCACCTGGGAGCTGCTTGTGGCTTCTGTGAACAGACGCAGCCTTCTGGAGAGTGAGTCAGCCCTGTGTCCACAACACATGGGACCCTAGAGGCTTGGTTGTGTTACCAGTGTCGAGCTGAAACAGCCCATTAGGAGCTTTACACAACTAGACAAGAAGACATTCATCTTATTCCTACAACTGGATTAATCAGAACTTCCTGCATACAACTTGCCTCACTAGTTCCTCCAATCTGAATTGCTCCTTGCTTGCCAAAGAGACTTCTTCTATTCTTCCAAGATAATAGATTCTCTATTTTTAAAACTTCTGTGTGGGGAAAAAAAAAAAAATCACTGTTTCTTACAACACTAAATCTTCTCCAAAAATGC TCONS_00140367 s 5' 52401 TCONS_00140367 s 5' 52944 EMBV3_06873 ACCAATCTCTCCCTTAATGCAGTCACAGCCGACGGGTCCAAGTATGGAGTGATGGATGAG Gene GeneID:522283|DHRS7B:NM_001035343:48_cdna Constitutive 0 NULL GeneID:522283 19 GENE DHRS7B MGC127349 dehydrogenase/reductase (SDR family) member 7B EMBV3_27609 AAGGCTGGATGCACCCCTGCTTGACACAACCTCCACTTAAGGAAACACCCTTTGTAGGGT Gene BVT0102_120598 + 0 NULL GK000011.2:46107248-46117226 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01010 AACTAACAGACCGAAAAAATCCAGAATCAGGCGGTGGTTATCATGGGCGTGGTGCTGCAA Variant GeneID:513550|FAM18B:NM_001046152:24_cdna 102^468 3 EMBV3_06432 GeneID:513550 19 GENE FAM18B MGC137873 family with sequence similarity 18, member B EMBV3_08410 GCTGGACTTGGCGTTAATATTGTGGGTGTTGCTGTGGTGATGCTTGGCATGTTTACCTGG Gene GeneID:514983|SLC13A1:XM_002686912:130_cdna Constitutive 0 NULL GeneID:514983 4 GENE SLC13A1 NULL solute carrier family 13 (sodium/sulfate symporters), member 1 EMBV3_31678 CCAGTGCCCCCTCCTCGGGCCACTGAGAATGTCTGCAAGGAGCTGGTCGACCTGCAGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18678 TCTACAGGTTCACCAGATAGAGATGGAATTAAGAAAAGCAATGGAGCACCAAATGGATTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14010 CTCCACCGTGCCCTTTGAGTCAGGGCGGAAACCAGATACTGAAGAGACTAGCAAACAGAA Gene BVT0102_044139 + 0 NULL GK000014.2:77937344-78295271 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00071418 TCONS_00115686 TCONS_00251707 TCONS_00130084 TCONS_00039226 TCONS_00129783 TCONS_00233372 TCONS_00064812 TCONS_00079609 TCONS_00071186 TCONS_00148672 TCONS_00116100 TCONS_00080603 TCONS_00020157 TCONS_00078719 TCONS_00129573 TCONS_00063486 TCONS_00063080 TCONS_00200574 TCONS_00209711 TCONS_00175855 TCONS_00218945 TCONS_00252107 TCONS_00010471 TCONS_00021595 TCONS_00008224 TCONS_00115865 TCONS_00135686 TCONS_00056146 TCONS_00161097 TCONS_00089437 TCONS_00208264 TCONS_00161835 TCONS_00020400 TCONS_00010053 TCONS_00107179 TCONS_00198813 TCONS_00170823 TCONS_00238307 TCONS_00116665 TCONS_00039951 TCONS_00131137 TCONS_00090421 TCONS_00122313 TCONS_00021878 TCONS_00238933 TCONS_00251907 TCONS_00063181 TCONS_00199037 TCONS_00111497 TCONS_00218898 TCONS_00079498 TCONS_00209636 TCONS_00122282 TCONS_00031910 TCONS_00251929 56 XLOC_043189 XLOC_069855 XLOC_154648 XLOC_078795 XLOC_023044 XLOC_078496 XLOC_142854 XLOC_039536 XLOC_048494 XLOC_042958 XLOC_090552 XLOC_070269 XLOC_049487 XLOC_010835 XLOC_047607 XLOC_078286 XLOC_038213 XLOC_037807 XLOC_122226 XLOC_128222 XLOC_105634 XLOC_132264 XLOC_155048 XLOC_006022 XLOC_012268 XLOC_003782 XLOC_070034 XLOC_081909 XLOC_033949 XLOC_097989 XLOC_054222 XLOC_126777 XLOC_098720 XLOC_011077 XLOC_005605 XLOC_063090 XLOC_120466 XLOC_103665 XLOC_144974 XLOC_070831 XLOC_023768 XLOC_079842 XLOC_055202 XLOC_073868 XLOC_012551 XLOC_145599 XLOC_154848 XLOC_037908 XLOC_120690 XLOC_067397 XLOC_132217 XLOC_048383 XLOC_128147 XLOC_073837 XLOC_018155 XLOC_154870 NonCoding TCONS_00129783 XLOC_078496 NonCoding NonCoding - 22:8218712-8219409 - TSS96650 697 1 TCONS_00129783_1 127 0.998565279770445 1 0 6.69488963950781e-05 6.92679879940781e-05 0.000132494263889341 0.000191037043949777 5.61789048296701e-05 0.000114944138382368 1.29258257212548e-05 0.000182391089983869 0.000749626710292578 3.73372261075017e-05 2.42063731936218e-05 0.000162241585329579 7.36694027018836e-05 4.45690578083534e-05 0.000137006085038783 0.000984718100413548 0.00544973711207766 0.0009573841336777 0.000154984976455171 0.00014023804265181 5.68917358745505e-05 0.000329251305499792 0.000293607826943863 0.000711526136263171 4.92050958815206e-05 6.80828894813736e-05 0.000139273376416584 0.000197148211557081 0.000138291200783266 0.00015902581679996 XR_239597.1 LOC101903263 PREDICTED: Bos taurus uncharacterized LOC101903263 (LOC101903263), 9e-19 98.7 83.70 0.130559540889527 0 noncoding 1 1 1 1 -2.06132673554012 0.00256116437580569 -0.0149585236604085 0.812391044970016 GGGTTCAGTTCATTTTGGCTAGTTCCTTGGTCAGATTTATATTTCTCAAGATCTATAGGCCCCTTCCTATGTAGTCTGTAGTAACCACAGGGTTTTGATCTATTGCCTGTAGCTTCCAAGGCGTTTCCCTCTGTTATATCTTCTTCTGTTTGCTAGTCTCTTCAGTATCTGGTTTCTGCCCTGACTCAAAGGGCACGGTGGAGGACACTTTTTTTTTTTTTTTTTTTTAGGCTTACTTGTTCAGTCGCGCTGTGGGGAGAGAGGGAGGGATGCTGCAAACAAATAACACTGGCGTGGTCTCGCAGTGCCTCAGCCACCCTGGGTCTGCCCCCACTCACGGCGCGTGTAGCCTCCCTGTCCACACTGCTCGGACTCTAGGTTGTTCCGCCGGGAACAATCCGAGGCTGGCCCTGGGCTGCATGCACCTCCCAGGTCCAAGCCGCTCAGGTTCAGGCACTCGGGTAGTCCTCAAAGGCGCAGACTCAGTTGGGCCTGCGTTTTGTGCTCTTCCCAGGTCCAACCGCCAATTTGCTCTTCCCAGGCGAGCGCCAATGCTGCGACTTATCGCCTCCCCGCCACTCGGTTATCTGGATGTAAAACCGGCGCACCTTCTCAGGCAGATGTTGACCGTCCAGACCCCCAAGAAGTTTTAGTTAGCAAAGAAGCCTGCTTACAATTTTATAGATAATGTCTCTCT TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 54762 TCONS_00125902 TCONS_00125903 TCONS_00125904 TCONS_00125905 TCONS_00125906 TCONS_00125907 TCONS_00125908 TCONS_00125909 TCONS_00125910 TCONS_00125911 TCONS_00125912 . 3' 55458 EMBV3_07340 CTCCTCAGTGGTGACGATGGAAGGACAGCGCCTGAGCCTGACCCTTGATGACAGCCTCCT Gene GeneID:510602|HAAO:NM_001075458:77_cdna Constitutive 0 NULL GeneID:510602 11 GENE HAAO NULL 3-hydroxyanthranilate 3,4-dioxygenase EMBV3_27958 CCCTAATGGACTCAAGTGTTTTTCACCAAGAGGTTTTCAGGTTGCCCCTAACCTTTGTGC Gene GeneID:513807|MORC3:XM_002685152:122_cdna Constitutive 0 NULL GeneID:513807 1 GENE MORC3 NULL MORC family CW-type zinc finger 3 EMBV3_12439 CCCACCAGTAAATCCTTTCACTATCCCAGCTGTCAGCAAAGAGGGCCCAGGAAACCTGCT Gene GeneID:533675|LYPD1:NM_001046359:14_cdna UTR3_Alt 1 NULL GeneID:533675 2 GENE LYPD1 MGC137590 LY6/PLAUR domain containing 1 EMBV3_15541 CAAATCTTATGTTACAAAGAATCTGAGCATTTCTTCCCTCTTAACCCAGGTGCTGAAGGC Gene BVV0102_313615 + 0 NULL GK000010.2:21864022-21864273 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00013136 TCONS_00016360 TCONS_00013131 TCONS_00013132 TCONS_00016358 TCONS_00013134 TCONS_00013133 TCONS_00013137 TCONS_00016361 TCONS_00016359 2 XLOC_008000 XLOC_008714 Coding TCONS_00013134 XLOC_008000 Coding Coding SLC7A7 10:21829573-21864372 j TSS9789 2339 1 TCONS_00013134_2 168 7 0.932984654290477 0.00224392206305146 0.000765536854635472 0.00160485164864949 0.00101834856647525 4.25952392356815e-05 0.000374172363499615 0.00062051055231293 0.00120075487427355 0.00240509419858464 3.69173389512294e-119 0.000154817344031145 3.622064210272e-05 0.000141061173840283 0.000986189846943532 0.000197820082934951 0.000387757260974594 5.26437937798468e-23 1.14491559127555e-108 0.00264624993282323 0.00365233879157226 4.54782609067587e-11 6.98506731583288e-29 1.03336933511942e-137 2.06169419369991e-09 5.3092710626535e-31 0.000253939100112079 0.000638110331681269 0.000122460890601836 8.20294329694545e-06 5.24859354137254e-05 XM_005211267.1 SLC7A7 PREDICTED: Bos taurus solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 (SLC7A7), transcript 0.0 1346 100.00 0.318512184694314 NM_001126106.2 SLC7A7 Homo sapiens solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 (SLC7A7), transcript variant 3, mRNA. 0.0 1058 91.42 0.318512184694314 TCONS_00013134_2 sp|Q9UM01|YLAT1_HUMAN YLAT1_HUMAN Y+L amino acid transporter 1; 7e-97 293 90.97 0.916666666666667 1 coding 0 0 0 0 -2.34863144577244 0.0218911826771214 -0.0079166781968951 0.89164673615979 CAACAGTTACTGGAGCTTGAGCCTTACCCCTTGTTCCCTTTCCCAGCACCGGCCCCTCTTCCAGAGTGCTGGTAGCTCCTCCTTGCACCTGCCCAAAGGTCTCAGACAGGTCTCTTAACCTTCATTAACTGTGCCTATGTCAAGTGGGGAACCCTGGTACAAGATGTTTTCACCTACGCTAAAGTATTGGCACTGATCGCCATCATCATCGCAGGCATTGTTAGACTTGGCCAGGGAGCCTCGACTCACTTTGAAAATTCCTTTGAGGGTTCATCATTTTCAGTGGGTGACATTGCTCTGGCACTGTACTCGGCTCTGTTCTCCTACTCTGGCTGGGACACCCTCAACTATGTCACTGAAGAGATCCAGAACCCTGAGAGGAATCTGCCCCTCTCCATTGGCATCTCCATGCCCATTGTCACCATCATATACATCCTCACCAATGTGGCCTATTATACTGTGCTCAACATGAGGGACATCCTGGCAAGCGATGCTGTTGCTGTGACTTTTGCAGACCAGATTTTTGGAATATTCAATTGGACCATTCCGTTAGCGGTTGCATTATCCTGCTTTGGTGGCCTCAATGCCTCCATCGTGGCTGCGTCTAGGCTTTTCTTTGTGGGCTCAAGAGAAGGCCATCTCCCTGATACCATCTGCATGATTCATGTGGAGCGGTTCACACCGGTGTCAGCTCTTCTCTTCAATGGTCTCATGGCGTTGATCTATTTGTGTGTGGAGGACATCTTTAAGCTCATTAACTACTACAGCTTCAGCTACTGGTTCTTCGTGGGGCTCTCTATTGTGGGTCAGCTTTATCTGCGCTGGAAGGAGCCCAACAGGCCTCGTCCTCTCAAGGTAATTCCTCTCCATCCCACATTTGCTGCACCTGCTCCAGGGATTCTGACACCTACTTAGAAACCTTGGCCCAGAACTGTGGGTGGTACTCATTGAAATGAAGGGGATGACAGGAAGGCTCAGCACTCTGCTCTACAGGAGTGGGGGGTTATTGTGGCTGTCCACCCTGACCTGTTTAACCTCCAATCGTTTCTTCTGGGCCCTCAGCTCAGCCTGTTCTTCCCCATTGTCTTCTGCCTCTGCACCGTCTTCCTGGTGGCTGTTCCACTCTACAGTGATACCATCAATTCTCTCATCGGCATTGGCATTGCTCTCTCAGGCTTGCCCTTCTACTTCTTCATCATCAGAGTGCCAGAACACAAACGACCTCTTTGGCTCCGCAGGATTGTGGGTAAGCCTTGGATCCTTAAGTCAGCTCAGCTGTTGTACAGCTTAGGCTTGGTTTTTTTTTCTTTTGCAACTCTTACTCTCCCAAGCCACCTCTGCCATAGCTCCTACCTGTTGTTGAAGTTTAACTGAAATTGTCCCCTTGGGCCCAGCCCCACTCAGTGCCACTTGGACTCAGTCCAGTTGACTTGACTTCTTCTCAGTTCTGACTCAAACCTCTCTTTGTAGCCTCTGTCACGTGGTACCTCCAGGTCCTATGTATGTCAGTTGCTGCAGAGATGGATTTGGAAGATGGAGGACAGCAGTCCAAACAACAGGATCCCAAGTCTAAATAACCACAAGAAATTTCGAGATGTGGAAAGCAGGGGCTTCTATCTCCTGCTGGCTGGAGGCAAGGAAGTTGAAAAGGAAAGCTCACTTCTTTGGAGGCACCTGTCCAGAAGCCTCTTAGGCAGCTTCAGCAACCTCTGAACTTGCTTTCTGAGAGATGTAGAGTAATTTATTTGTTTTGCTACATATTATTCCAGGTTTCTTTTAAAGGGACATAAAGCAGACTGTGATGGGAAGCATGCTAAGTGTGAGCTTGGATGTTCCAGTGGCATGTTCCCATGTGTTAAGATATCCACTCACCTCCAGTGTGCCTGCCCACTCCTCTTCCACTGGAAAATCCAACAATGCTTTAACTTCCTTCTCCTTTAGAGACATGAAACTGTCACAGGTGCTAGACAATAAAAGGGTATGCTTCTAAACTCTGAGTGGCTCCATCATTTTTATACAGTGTCTTAGGGATAGTTTCCATGAGCCAGGCAGGAAGACTAAAAACAATCTTATGTTACAAAGAATCTGAGCATTTCTTCCCTCTTAACCCAGGTGCTGAAGGCTGATGCAATCAGCCTCTACCCAAGAGAACACCTATGCTGCTGTAGCAAAATGCTAGGTTATTTGATAAAAGCTGTATCAACTTCTGTTCCTCTTATCACTAAGAAATTGAGCACATCTACTTCTTGAAGGATATTTTATAGGTAATCTTGGGATAAGTAAATGTGGTTCCTCCATATACATTCGCCACTTACCAGGCATACACCGCTGAAGACAAG EMBV3_29654 AGCAAATGCTAGAGCAAGCCCTGGAGCACACAACCACCCAAAGGCAGTTTGAAGAGGAGT Gene GeneID:789632|ZCWPW2:XM_002696896:365_cdna Constitutive 0 NULL GeneID:789632 22 GENE ZCWPW2 NULL zinc finger, CW type with PWWP domain 2 EMBV3_07253 TTCCCCTTCAAAGCCTGTGCCCTTCACAGAGGTCCTGTACAATGCCCAGAGAGACTTACA Gene GeneID:616715|MGC137014:NM_001046584:40_cdna Constitutive 0 NULL GeneID:616715 5 GENE MGC137014 HP-20 hibernation-associated plasma protein HP-20-like EMBV3_39364 AGCCCAAGCCTGCCACCACTGCTACTGCCGACATCTGGGGAGACTTCACCAAATCCACAG Gene GeneID:509439|NECAP2:NM_001015562:108_cdna UTR3_Alt 4 NULL GeneID:509439 2 GENE NECAP2 FLJ10420 MGC134076 NECAP endocytosis associated 2 EMBV3_43717 AATGAGAGAAAAATTGTCGGAATGTTACCCAGTCTCACCCCCACTTCCCGCTGCCCTCCG Gene BVT0102_208486 + 0 NULL GK000023.2:24456317-24489540 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00134422 TCONS_00134421 1 XLOC_081401 NonCoding TCONS_00134421 XLOC_081401 NonCoding NonCoding - 23:24456641-24468842 - TSS100204 1535 3 TCONS_00134421_2 78 0.327687296416938 2 0.874344262295082 0.000185297929002196 0.000102514378988466 0.00012239510362521 0.000102787432463323 9.19356028943715e-05 1.91894451280301e-05 6.45857396664922e-05 0 9.50926973160633e-05 0 1.13563637764479e-06 4.65867455905794e-07 5.37822025520193e-10 7.20154956291875e-05 0.000143829892362366 0.000103237131633404 0 0.00431530832077617 1.81685566752886e-09 1.41827922405077e-09 2.57097492208512e-05 0 4.7807865528647e-05 1.09215372653516e-05 5.86774706065834e-05 2.44550398882005e-05 7.73370786573749e-10 0 3.47886955284137e-05 3.13341617598305e-05 NM_001206461.1 DSEL Bos taurus dermatan sulfate epimerase-like (DSEL), mRNA. 7e-113 412 93.17 0.179804560260586 0 noncoding ACACTAGGTGTCAGTAACTGTCATGTCCCTCTCCACTACCCTCCTGACCATGGCTCCCTGCTGCAGCTCCCACAAGCAGGTAGCCAGATGACAGCCATTTTCCTTTGACTAAGGATCAACGTATCTGCCTGCTACTGCTACTGCTAAGTCACTTAAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCTCCCGCTCCTGGGATCCTCCAGGCAAGAACATTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCGTTCAGTCGCGTCGACTCTTTGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGAGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGATCTGCCCGCTGCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTTCGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCTTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCTTAATACACACATACAACTAGATGGCATATACATTTTGCTTGGGCAGATTATATTTAAGTGTACAGTGAGTCCTGGAGACTTTCAAACATAATTTAATAATTATTGGTCGAAATTTCAGATATAGTTACCAAATGTCTAGTCCTGTTCATTAAATTAAAAACACATGCAGGGGGGCTGCTCCTTACTGTGCACTGAGTGGTTACAGGGGTGTATACATAATAAAAATTCATTGAGCTGTACATGTAAGATTTGTGCATTTTATTGTAATTTACAAATTACACCTCAAAAATGGAACTAAATATATAAACAAATATGCAATTGGTCTTTTAATTATTTATAATTTCAAATTTGCTGTATTTTAACTACGAGTAGATACTTAAGAGGCTTGAAACACCTTTTTTGTTCTCCTAATTATCTTGCAATAAACTAAGCTTTTTAAAAAGAACTTGTGACCTTCTAATAAGGGGAGAAAGCCTTTAACTTACCCGCTTGCAAGTAGGATGGTGTAGTAATTACGTCCACAATTTCGTGTAACATATATAAGATCATCTCGGAGGGCAGCGGGAAGTGGGGGTGAGACTGGGTAACATCCCGACAATTTTTCTCTCATTTCTCCCTCCTCTGCGGCTTGATATTTTTATGAGGTACTTCAGGCCCCGGTATTCAGTTAGCAAACGAGTCACTGAACTACAAGAACCTCTCCAAAGATGTTATAATTCTATTTTCCCCTCAGATTCTCGAAATTCACTTCTCCCCGTGGATACCACTAGAGACTGGTTGACTGAAAAACATATCCATGCACAACTGATTTGAATATATTTTTTAAACGACTTGCCTTTATGTTTTTATCGCCCTGCGTTCTAAACCTCTGTTCTCTGACGTCTAAGCTACTTTCAGTCCAACAACGGGGCTGAGTTTCTTCACTCTTCAGCAGGGCAGGTAACCACAACTTGAGAAAAAAACCACGAACGTTTGTAAGATTACAGGGGAAAGGG TCONS_00134419 s 5' 125 TCONS_00134419 s 5' 1583 EMBV3_42580 ACCCGGCGTTCTCTCACTTGGTCTACTTCCACTGCAGCGCCTTAATCTGCGATCAACTTT Gene GeneID:280963|ZP2:NM_173973:282_cdna Constitutive 1 NULL GeneID:280963 25 GENE ZP2 NULL zona pellucida glycoprotein 2 (sperm receptor) EMBV3_01871 AGGTCTTAGCTGTGACACATCGGATCTTCGCTGCAGAGTGCTGGATCTTTCATTGCACTG Gene BVV0102_164580 + 0 NULL GK000004.2:88977482-88989467 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17105 CCCTGCATCAGTGGGTGAGAATATGCTTCCCTGATCACCTCTCAGTGGACCTGCTTCTAT Gene BVV0101_049497 + 1 EMBV3_40549 GK000021.2:45234066-45302731 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36370 TGACCAGTACAAGCTCACAGAGGACACGCGGCAGCAGGATGCCTAGCAGCCAGGCCACTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42930 TGATGAACTTACTTCAGATTATGTGTGACCACTGGGTACATAGTCATGTACCTGTTGGAC Gene GeneID:100295470|LOC100295470:XM_002696618:152_cdna Constitutive 0 NULL GeneID:100295470 21 GENE LOC100295470 NULL hypothetical protein LOC100295470 EMBV3_23616 TTGCTGAGAAGCTCCCTAACACTGAGCTGGTAAAAGAGTTTAAGGCTGCTGCCACTGACG Gene GeneID:445463|ApoN:NM_001003907:929_cdna Constitutive 0 NULL GeneID:445463 5 GENE ApoN NULL ovarian and testicular apolipoprotein N EMBV3_00061 GAAATCGCTTCCTCACCACTAGCGTCATGTCTGCTGTCTGTCGTTTGACCTTCCACATGA Gene GeneID:505229|ARID1B:XM_002690360:15_cdna Constitutive 0 NULL GeneID:505229 9 GENE ARID1B NULL AT rich interactive domain 1B (SWI1-like) EMBV3_06855 AGCAGCAGCAGCAACATAAAAAGGCCTCTGGGCCAATATCCAAACGGGGCACAGGACTAT Gene GeneID:100139170|GBA2:XM_002689680:99_cdna Constitutive 0 NULL GeneID:100139170 8 GENE GBA2 NULL glucosidase, beta (bile acid) 2 EMBV3_13029 GGCCTCGGAAGGTGTTTCCGATTGAGATATTTTAGTCACCCTCTGATGAAGCTTAAACGG Gene BVV0102_073088 - 0 NULL GK000027.2:30509875-31849126 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00158121 1 XLOC_096575 NonCoding TCONS_00158121 XLOC_096575 NonCoding NonCoding - 27:31080651-31081557 - TSS118446 906 1 TCONS_00158121_1 66 1 0 4.50520134993493e-05 0 3.0642417956152e-05 0 5.4494294655766e-06 0.000217150466602419 0.000128734871045988 0.000711594478487376 5.22525746951135e-05 0 0 0 0.000250191352618261 1.03841090799543e-05 0.000113719634334872 0 0 0 0.000150383698404929 0.000508003157127484 0.000934843559208421 0 0.000921456251817747 1.85040213252925e-05 0.000420603521886663 0.000139976138742875 0.000523831133848709 0 0 0 XM_005273404.1 UNC5D PREDICTED: Homo sapiens unc-5 homolog D (C. elegans) (UNC5D), 2e-166 589 73.97 0.998896247240618 0 noncoding 0 0 0 0 -0.129285817661155 0.303214244211163 -0.000707408899011913 0.98939972323278 GTTCTATTGAGTCATGAAAAGGAAAGGTGATATTTGAGAATTTGTGGACAGAATATCATGCCTTCTGACCCCATTACTGAAACAGATACTATAACCAGAAATAGATCTAATAATTCTAGTATTTCTCCATTAGCAGCTCTGATGATACTTAAGGGGAAGTCACCTCTTACCAGGAGACTTCCGTTTAAGCTTCATCAGAGGGTGACTAAAATATCTCAATCGGAAACACCTTCCGAGGCCTGTCCTAAATTATATTGACCGCTCTCATTCAAAACTTCTCTGTAAGAAGGTGGACACACTCCATCTGTGGAAATTTTCCGGTCAGGAAAACAGTTTCCTCCTTTTCTAAACTGGAATAAAGGCCAACTTAACATTTCCCATTCTTCAGAACTGTATCTGATTGGTGCATGCAATCCGGTAAGTCTCAGCCTAGAAATATTGCAAACATAAGCAGTTAAGAGGAAACTGGATAATTCTTCCTGACTCAAACTAAAAAAAAACAAAAAGGAAAAAAGATATATATAAGTAATGCTTTACCTCCACTTCTTTATGGAAGAATTTTTTAAAGAGATTTCCTTTTGTTCTGTTTATTTTGGGAAAGTGTGTGTGCGCATATGTGTGTGTGTCGGGGTGGGGAGGGTGGTTCTTTGAAATGACTCATATCTCAAACCCATTCCACTCTCAACATTCATTTGATGTGTTCAAAGCCGGAAAAAAAAACAGCAGAACTGAATACTCAATCTGACATGAAGCTGAAGGAGTGAACAAGCCAGAGGAGAGAGTTTGAATAAAGCATGGCCTTGGCTTCATACCGCCCTTCTTGTGCCTTGTATTATCAGTGTAAATTCTGAATGTTGTACAGTAAATCCTTGGATGGACTTCTTAGAAAAGGCTGCACTGGCTTCT TCONS_00155414 TCONS_00155415 TCONS_00155417 TCONS_00155420 TCONS_00155421 . 3' 112 TCONS_00155414 TCONS_00155415 TCONS_00155417 TCONS_00155420 TCONS_00155421 . 3' 1017 EMBV3_00960 GCTTCACACTCTTGCGTAGTGTCAGATGTACTGATTTTTGCTTACATGCTGGAGGTGGTC Gene BVV0102_201797 + 1 EMBV3_19123 GK000024.2:50928291-50945821 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10555 ACCAAGGCAAAGGGTTCAAGATGAATCGAGGGAGGAAGCTGAAGTGGGACAAGTGTGGGA Gene GeneID:783785|ROBO4:NM_001099191:50_cdna Constitutive 0 NULL GeneID:783785 29 GENE ROBO4 MGC155200 MGC160058 roundabout homolog 4, magic roundabout (Drosophila) EMBV3_11925 GGCCATTGGTCTTCCTTTGCCACAGCCCTGAGAGTAGCAAGAAATAGAATCACTTGCATG Gene GeneID:511579|DPH3:NM_001113299:5_cdna UTR3_Alt 2 NULL GeneID:511579 1 GENE DPH3 MGC138937 DPH3, KTI11 homolog (S. cerevisiae) EMBV3_28485 GCAACAGGACCCCCCAGAAATGATTCTTGCTCCTTTGCAGACCCCTGAAGAACAGTGGGA Gene GeneID:513478|IL10RA:XM_002693004:193_cdna Constitutive 0 NULL GeneID:513478 15 GENE IL10RA NULL interleukin 10 receptor, alpha EMBV3_41604 GGAAGGCTTTCATTTCCTGTTCATCATGTAGCCCTTGTGACTTCGCTCTCAGTGGTCACT Gene GeneID:100336824|LOC100336824:XM_002692769:137_cdna Constitutive 0 NULL GeneID:100336824 14 GENE LOC100336824 NULL novel gene similar to vertebrate polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 (PKHD1L1)-like EMBV3_38977 TCACCGTTTCATGTCAGAGGTCCAATTAATCAGGTTTGCTCTGAAATCCTTCTCAGCAGG Gene GeneID:617867|LOC617867:XM_002686907:117_cdna Constitutive 1 NULL GeneID:617867 4 GENE LOC617867 NULL hypothetical LOC617867 EMBV3_35026 AGTTCATTCCACCTACATTTCCATTCACTTTGGCTTTCTGTGCATAATTACTTTCCCTTG Gene GeneID:534927|PRCP:NM_001038164:31_cdna Constitutive 0 NULL GeneID:534927 29 GENE PRCP MGC134276 prolylcarboxypeptidase (angiotensinase C) EMBV3_02381 CTAGATTGTGAAGACAATCTGAAACTCTGTTACATGTGGTCCAAAATACACAAGCTCAGG Gene BVV0102_396413 + 0 NULL GK000012.2:708413-1244344 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33404 CATTCTTGAGAGTGGGTTACACAGCAGAAAGCGCAGCCTGAAAGAGGATTCCTGAGTGGA Gene BVT0102_089453 + 0 NULL GK000019.2:6658791-7356622 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098455 1 XLOC_058700 NonCoding TCONS_00098455 XLOC_058700 NonCoding NonCoding - 19:7036835-7039082 - TSS72831 2247 2 TCONS_00098455_1 72 0.237650200267023 1 0 0.000974863845246967 5.36631278835792e-05 0.000292404733444933 4.80435713189808e-05 0.000151609009101575 9.55152157991357e-06 0 0.000113187737894556 1.40456356657599e-05 0 0 0 0 0 0 0 0 0 3.8296106411488e-05 3.20045232729786e-06 6.75506737653375e-06 0 0 0 0.000200423159509937 3.13550246252649e-05 4.9543258499476e-05 0 0 0 XR_228575.1 LOC100848569 PREDICTED: Bos taurus uncharacterized LOC100848569 (LOC100848569), 6e-33 147 75.70 0.0867823765020027 NR_103761.1 CYP4F43P Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 43, pseudogene (CYP4F43P), non-coding RNA. 3e-06 59.0 80.65 0.0271473075211393 0 noncoding 0 0 0 0 -0.0562262885649162 0.631671486393836 0.00403234427063981 0.948664407978229 ATGCAAAATTAGACAGCCAATGGGAATTTCCTGTATGATGCAGGAAGCTCAAATTCAGTGCTCTGTGCCAACCTAGAGGGGTGGGACGAAGTTTCAAGAGGGAGGGGATATACGTATACTTATGGCTGATTCATGTTGACATATGGCAGAACCCAACACAATATCGTAAGGCAGCTATCCTCCAATTAAAAATACATACATTTAAAAGTTTTCCTGCTTAAATATTCATCCCTTGCCCTAATAAAAGAACTACCCTTTCCTTGACAGGGAGCCATGGCTTTGGGAAAAGACTCCCCATGACCTCCTTATTTGCTGCAAATGAAAGCTTCATTTTGTGTGATAATTTTCCTTGGTGTTGTCTCTGACTAAAAACTCACCAAGAAGCAGATCCCCTTTGGATTGGTAACGACAGCAGTGAAAGGCAGTGGCTTGCCCTCGCCAAGCAATTTTTATCAGTGGCTCCCTTTCCCTTATCTGAAAAACGGACATGCTGGCATCTGACAGGCTTGAGACCTGAAAATCAGAGCTAACCTAAATCTGTTTCCTCTGAGGAAGGAAGTGATTATGTGGACCTTTGGGATTGTCCTGATGTTTTATAATATGCACACAAAGTTCTTTATTAAGAGATGAGGAGTTATTGAAGTGAAGAAATACTACTACTGTGCAAGGGATCTTTATTTCTCTTATGGGTGCCTACCTTGCACTGAACTTGTTAATCTATATATACCGTCTCACTCCCTGCACATTTCCTACAGGGTACGTATAGGTAACTCGAATGTGAAGCTGAAGAGACTCATAGAGGAAAAGGACTTTGCCCAAATTCACACAGCTGACAAGTGATGGATCTCACATTTGTACTTGTCTTTTAGACAGACTTTCTACTTTTAACCACCAAATTATATTGCCCCCTGATTGATTTCACCCATATTGAGCACGCCCGAGGTTTGCAGGGTCCTTCTGCGACACCAGGCTTTATAATGCCCATAAGGCTTCACTTGGAGACATTCTGGAAGCTGTAAGTTCATAAATAATGTCTCTTCCACTTGGTCAGACTTGCAGTGCCAGTGGAAGACAGATGATCCTCGGCTGTACATGGTATCCCTGCAAGCTAACACGTTACTTCGTAGTCTTGGGTTGCCATCCCCTGGAGTGTTTTGATGCGATCAGTTGTCAGTTTCAGGTCTGTTGTTTCTCTCAGCAGAAGCCCAGCCAGTGGAAGATGACAGCCCCAAAGCCCTGCCTGTGTTAGGGGAGCTATCGAAGTCGGATAATGACATAAGCGAGTCGGTGTTCATCTGGGGAACCTCAGACAAAGCAGCCCAGAGAAAAACCATCTCTGTCGATGAAGGTTTGTTTCACTTGCAACAGGAAAAGCAGCAGCAGCAGCATCCGGAGCCGGTACTCAGGCTGGGGAGAGGGAAAGGGAAGCTGAAGCTGCCACATGTGAGTAGCATTTTGCGCTTTCTCTGCAGCTGGGAAAGGAACGCTGGGGAGGGGGCTTGGCTGTGAGGCGGGCGTGCATGTGTGCGTTGGGGCTCTCTGTATGGCTGAGGGTGGGAGATGGTTTACACAATTAACAAGTCCCTTGGGGATCTGCTCTCCTCTGCCAAAGGAGGTGCAAGAGTGGGCTCACACGCACTTGCATTTTCTCCGCTGATCATAACACACGTAAGCAGCAGGTGGGGATTGTTTTCTTTTGGTTTTCATTTTTTCTTTCCTCTTCTCCATTCTTGAGAGTGGGTTACACAGCAGAAAGCGCAGCCTGAAAGAGGATTCCTGAGTGGAAGGACTCTTTTCTTTCCCAAGAGGTTTTCTTTCCCAAGTTTCTTTAGCAGGTGTGCAGATCTCCATTCCTTTGCCCCTGAGCTGCTCTTTGGTAGGGGTGTTTACTCCCTGCTAACCACAAAGCAGCCAGGGTGACTTTTGCATCTCTCTCAGCCAGAGTTGTCTGCAATAAACAGCACCAGATCTGACACAATTTAACCTCTCAGGTGTACTGTTCAAAGAGTTTAGTGAGCAAAGCCCTGGGATGGGAAACATGGGATGTACTTCATGCTTCTGCTCAGCAGGTCTCTCAAGGCTGACAGCATGGATCTTGAACTTTGGGAAAGTTTTTTGTTTGCTTGTTTAGCCAAGCTCTGACATTTACTGTGAACATGGGATTGAGTGATGCTGAAAAGGGGCAGGAGAGAATGCTGTTGCTTTAAAGCCCTCGTACAGCAGGTTGTTGCAGCATCAGGAACTGGT TCONS_00092087 . 5' 122589 TCONS_00092087 . 5' 122589 EMBV3_07875 ACTCTCTACCACTGTGCCACCTGGGAAGCCCCTCTGTGATGAAGTATCAGCGGCTTAACA Gene BVT0102_180292 + 0 NULL GK000019.2:22242160-22287404 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00099170 1 XLOC_059413 NonCoding TCONS_00099170 XLOC_059413 NonCoding NonCoding - 19:22258352-22258798 - TSS73546 446 1 TCONS_00099170_1 63 1 0 0 0 0 0 0 0.000192487024778893 0 5.30468334976465e-05 0 0 0 0 0 0 0 0 0 0 8.03915616160035e-05 4.83728800573814e-05 0 0 0 0 0.000776734270250074 9.47820579562748e-05 0 0 0 0 XM_005225449.1 PAOX PREDICTED: Bos taurus polyamine oxidase (exo-N4-amino) (PAOX), 2e-06 57.2 94.44 0.07847533632287 0 noncoding 0 0 0 0 -1.7132291112149 0.0401939683333173 -0.190473849623173 0.0079385177132001 CTCTCTACCACTGTGCCACCTGGGAAGCCCCTCTGTGATGAAGTATCAGCGGCTTAACAGGCTAAGTGTAGTGTCTGCACGTGTTCCTGGTGGGCTGGCTTGCTTCATGGTATTGCTGAGAATCCAGGCTTCCGTACCCCCTTGGATCTACCCTCCTCTGGATCCCTGTCATTCTCAGTCATCAGAGGGCACTTGGCGGCAAGAGAGTGAAGGCACACTTGCTTCTTAACTCTCTCAGCCCGGAACAGATGCCCATTTCTTCTGTTTATGTTCCACTCGCAAAGATGAAGCACGGGCCCTCTTAGATGCAGGGGTCCTGGCACGTGTAGCCCCTGGTTGAGTAGTTGGTCCCCAGCAACAGCCTTACTCTGGGGAGGGGACTGGGGCAGGAATCTCTGGTGGACCCTCACTTGTCTTTGCCACCAGGATCTTATTAAATAAGCCTC TCONS_00092687 . 5' 28607 TCONS_00092687 . 5' 28607 EMBV3_15158 CTCCATCGATGAGGAGCTGGTCTATGAAAATCATACAGTTTATCGAGAAAGAGAATAGTG Variant GeneID:614777|CDC14A:XM_002686168:323_cdna 141^216 1 EMBV3_42769 GeneID:614777 3 GENE CDC14A NULL CDC14 cell division cycle 14 homolog A (S. cerevisiae) EMBV3_24880 GTGTCTTACTTACATATTTCCATCAACCTAAAACACTGTTACACAACAGTCACTAGATGT Gene GeneID:768238|LOC768238:NM_001078113:6_cdna Constitutive 1 NULL GeneID:768238 17 GENE LOC768238 MGC152045 hypothetical protein LOC768238 EMBV3_18856 AGGCCCTGGTATGGGAAGGCACTCCGTAGATTGTACCCATGGCTACTCCTGGCCTAATAA Gene GeneID:518761|SPIRE2:XM_002694865:830_cdna Constitutive 1 NULL GeneID:518761 18 GENE SPIRE2 NULL spire homolog 2 (Drosophila) EMBV3_41339 TGTATTCACCATTATAGTATCACAGAGTAGTCTCACTGCCCTAAAGGTCCTCTTTGCTCC Gene GeneID:100125284|NEPN:NM_001103327:4_cdna Constitutive 0 NULL GeneID:100125284 9 GENE NEPN MGC157274 nephrocan EMBV3_11298 ATTTGCTGTCTGTTCTCCATGTTAATGTATTTTCTCTCAGTCACTGGTGTCACGAAACTG Gene BVV0102_243912 + 0 NULL GK000003.2:57338853-57390490 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10526 CACTTTTCAAAGCAAAAGAGGCCACACTGCTCCTGGCTGTGTCCAACCTGTGTTTCGATC Gene GeneID:767929|GPR171:NM_001077002:62_cdna Constitutive 0 NULL GeneID:767929 1 GENE GPR171 MGC128663 G protein-coupled receptor 171 EMBV3_41163 AAGGGAGGTAAGGAGAGAGGCTGAGAAAGGCAGATAATCGTCAGCAGATGAACTTGGAGG Gene BVT0102_087190 + 1 EMBV3_39723 GK000008.2:9221395-9276110 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32733 GTATCACCATCTTCTCTGTTGGTGTGGCTTGGGCACCTCTGGATGACCTGAAAGATATGG Gene GeneID:504316|COCH:NM_001077842:8_cdna Constitutive 0 NULL GeneID:504316 21 GENE COCH NULL coagulation factor C homolog, cochlin (Limulus polyphemus) EMBV3_05222 TGAAGACTGTAGTCAGTGCACCATTCCAGAGGGAACCGTGTGTATGAGCTTGGGAGTAGA Gene BVV0102_100583 + 0 NULL GK000004.2:37418323-37509681 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181330 TCONS_00181328 TCONS_00181333 TCONS_00181329 TCONS_00181332 TCONS_00181331 TCONS_00181334 1 XLOC_110581 Coding TCONS_00181333 XLOC_110581 Coding Coding LOC517284 4:37444319-37920880 j TSS135747 13871 1 TCONS_00181333_17 4409 0.0243673851921275 15 0.97092496222931 0.000509470764252409 0.000281155783507267 0.000691941950863945 0.000521545295318624 0.000522230708265461 8.27298845543069e-05 0.000152674690248915 0.000170825085340077 1.95256746189082e-06 0.000223303120909058 0.000208606145926691 2.55765456489256e-11 6.83741573574751e-05 0.000499574586468641 0.000495681956233058 9.87121152644956e-140 0.00016200956538922 9.60642521974002e-05 0.000372533651451389 0.000655031800582784 0.000203981319571961 0 0.000234696273258405 5.23584686247046e-09 0.000986042753169938 0.000912196420101453 0.000495106903042146 0.000186865892873455 3.5647527755123e-05 0.000125634455225971 XM_003585956.2 PCLO PREDICTED: Bos taurus piccolo presynaptic cytomatrix protein (PCLO), mRNA. 0.0 2.399e+04 100.00 0.964746593612573 NM_033026.5 PCLO Homo sapiens piccolo presynaptic cytomatrix protein (PCLO), 0.0 1.651e+04 87.22 0.964746593612573 TCONS_00181333_17 sp|Q9Y6V0|PCLO_HUMAN PCLO_HUMAN Protein piccolo; 0.0 6634 83.80 0.987071898389657 0 coding 1 0 1 1 -0.189765077796601 0.121290151393337 0.0287086427707849 0.641572176953036 GACTACAACAGACCTGCAGTATCTACATGGCTGGCAGTGACTTGCTTCTAAAGAAGAGAATACAGCAGAAGTGATGTCGCTTCCAAGAGCAGTCTAGGAAACACTGTGGTGTTCCCTCTCAATCTCTCGCCGGCGATCTCTGCTGAATCCAGCGGCTGCAGTGAGCTGCCCTGGAGATGAGCAAGGAGTTAAGGACTTGAGGACAGCCTGAAGACTGTAGTCAGTGCACCATTCCAGAGGGAACCGTGTGTATGAGCTTGGGAGTAGATCCTGTTCCAGTTCAGCCTTGAGGTGACTGTGACCTGTGGTCACACCTGAGTCACCTGAGTCAGAGGAACCAGCCGAGCTGCCCTGGATCCCTCACCCAAACCAGCTGGAGTCCAGAAGTCTGGGATCAGGGTGCCAACACTGCCAGGTTCTGGAAACAAGAGTTGGATAGTAGTCAACCTCCAAAGCAACCAGGAAAACCACCAGACCCTGGGCGTCCAATTCAGCCTGGTCTCAGTAAGAGTAGAACTACAGACACTCTGAGGTCAGAGCAGAAATTGCCTGGAAGAAGTCCTTCCACTATTAGCTTAAAAGAATCGAAATCCAGAACTGATTTTAAGGATGAGCACAAGTCTAGTGTGATGCCTGGCTTCCTCTCAGAGGTTAACCCTTTAAGTGCTGTCTCCTCTGTTGTAAATAAATTCAATCCTTTTGATTTGATATCAGACCCTGATGCCTCCCAGGAGGAAGCCTCTAAGAAACAAAAAATAGCTCAGAAGGAACAAGGAAAACCCGAGGGAGTCACAAAGCCTCCATCACAACAACAGTCTCCCAAGACAGTTCCTAAGCAGCCAGGACCTGTGAGGGCTCCGCTTCAGCAGGAAGGTTCTCCAAAATCCGGATCCTCTCAGCCACCAGAAAAAAGTAAATCACAACCTCCAGAAACAGGAAAGCCAGCTCAGGGCTTCCCCCAGGCTCCTCAGACAGACCAGGCAAAATTGCCACTTCAGAGAGATGTATCTAGGCCTCAGACTAAACAGACAGACCCAGGAAGGGGTGAGTCAGCTAAACCCTCACTGCAGAGCCCCTCCAAGCCACCTATTCAGCAAGGAAGTCCTGGAAAATCTCCAGCCCAGCAGCCTGGACCTGAAAAACGTACCATACCACAGCCTGGGCCTGCAAAGCCCCTAGCTCAACAACTGGGAACAGCAAAGCCCCTGGCCCAAGCTCCAGGGGCAGCAAAATCCCTGGTTCACCAACCCGGGCCACAGTCTCCAGCTCAGCCGCCTGGGCCAGCAAAGGCTCCAGCTCAGCAGGTTGGGACAACAAAGCCTCAGGCCCAGTTGTCCGGCTTAGGCAAGACGCCACCTCAACAGCCTGGCCCAACGAAACCCCCTCCTCAACAGCCGGGCCCAGTGAAGCCCCCTCCTCAACAGCTGGGCCCAGCGAAGCCCTCTCCTCAACAGCCTGGTCCAGCGAAACCCCCTCCTCAACAGCCTGGTCCAGCGAAGCCCCCTCCTCAACAGCCTGGTCCAGCGAAGCCCCCTCCTCAACAGCCTGGTCCAGCGAAGCCCCCTCCTCAACAGCCTGGCCCAGCGAAGCCCCCTCCTCAACAGCCTGGTCCAGCGAAGCCCCCTCCTCAACAGCCAGGCCCAACGAAACCCCTTCCTCAACCTCCAGGTTCAGCAAAGCCCCCTCCTCAACAGCCAGGCCCAACGAAGCCCCCTCCTCAACAGCCTGGTCCAGCGAAACCCCCTCCTCAACTGCCAGGCCCAACGAAGCCCCCTCCTCAACAGCCAGGACCTGCAAAGCCCTCAGCTCAGCAATCTACAAAACCAGTAAGCCAAACAGGAGCTGGGAAACCTCTGCAGCCACCAACGTTTCCATCTGCAGCACAGACTCCAGTACACGGCCTCCCTAAAACCATCTGCCCTCTTTGCAATACCACTGAACTTCTGTTGCATGTTCCAGAAAAGGCCAATTTTAACACGTGCACTGAGTGTCAGACCACTGTTTGTAGCCTCTGTGGTTTTAATCCCAATCCTCATTTAACTGAGATGAAAGAGTGGCTCTGTTTAAACTGTCAGATGCAGAGAGCTCTAGGAGGTAACCTGGCTCCAATTCCATCATCACCCCAGCCCAAACCGAAGACTACCCCTGTTCCTGCATCAGCAGTGAGCAAGCCACCCACTCCGTCACAGCAGGTTTCTCCAAAGAAAGACACTATCCCCAAACAGGATGTCTCAAAGGTAGCTGAGTCTAAAAAGCCCCCACCACTAGTGAAACAACCAACCCTTCACAGCCCCCACCCAGTCACATCCCAGCAGCCTCCTGAGGCAGAGTCCTCATCCAAGCCAGTCCCTCCCGAAGAGCCTTCTGTCTCGTCTGAACCGGCCAAGGTCTCCACGGCTGATGATAAACCAGAGCAGCCCAAGGCAGGAAAGCCAGCCACAGACATTGTGTCTTCATCATCAACAGCAACAAGACCGGACATTCCAGGCCCCAAAATACCATCAAAGGATCAAGAGAAAACGACTCCTCCTCTAAAACCAGACTCCGCCAAACCTTCTCAGAGTTTTCCACCAACAGGAGAAAAAGTTACCCCAGTAGATTCTAAAGTCATACCTCGACCTGCATCAGATACAAAAATTATTTCACATCCTGGACCTACTCCAGAGAGCAAAGATCAAAAACAAGTTGATCCAATTCAGAAAAAGGACGAACCCAAGAAAGCACAAACCAAAATGAGTCCTAAGCCAGACACCAAGCCGATGCCAAAAGGGGCACTGACACCCCAAGGTCCACGACCCCCCACTGGACAAACTGCCCCTCTATCTCCACAGCCCCCAAAGCCTCAGGAACAGTCGAGACGTTTTAGCCTAAATCTTGGAAGTATTACTGATGCCCCTAAATCACAGCCTACAACTCCTCAAGAAACAGTGACTGGGAAACTCTTTGGATTTGGAGCATCCATCTTTAGCCAGGCATCAAATCTGATCTCCACAGCAGGCCAGCCTGGGTCTCATTCACAGGGTGGGCCAGCGGCCCCAACAAAACAAGTCCCTCCTCCTTCACAACCACCTACTTCTCAAGGGCCACCCAAATCCACAGCACCGCCAGCACCTGCAAAGGCTCTACCTGTGAAAAAGGAAACCAAAGCTCCAGTAATTGAAAAACTAGAGCCCAAAGCTGAACAAGTTTCAACAGTAAAAAGAACAGAAACAGAAAAGAAGCCTCTGCCTACTAAGGACAGCAAGCCTTCCACGGCTGAACCTCAAAAGGTTGTTCTTCCCCCCAAACTGGAAGAAACCCCCAAACCAGAATCAGCCTGTCCTCTCTGCAAAACTGAACTCAACATAAGTTCTAAGGATCCTCCTAACTTCAACACTTGCACTGAATGTAAGAAACAAGTGTGTAATCTCTGTGGATTTAACCCTACACCGCACTTGACTGAGATTCAAGAATGGCTTTGTTTAAATTGCCAAACCCAGAGAGCAATATCAGGACAGCTGGGAGACGTGGGCAAAATGCCTGCTACACAGGCGGGACCAAAAGCCTCGCCTCTGCCTGTCCCTGCAGAACAACCATTTCAGGAAACAGCAACGCCTGCCCCAGTAAAAGTGAAAAAGAAGCAACAAGAAGAAAAACCTGAAGCTGAAAAAACCATTTCAGAAAAGGTAAAAGAAACACCTTCAGGTGAAAAAATTCCCCCTAAGGAAACCATAGATCAAATCCGAGAGGAGAGTAAAGGAGAGAAAGACAAAACTTCAGCCCCTCAAGAAAAAAAGTCACCCCCTGAAGACAAAAAACCACTCCCTGAAGAAAAAAAGCCACCTCTTGAAGAAAAAAAACCAACCCTTAAAGACAAAAAGCCGGCTCTTGAAGACAAAAAGTTAGCCCCAGGAACGAAAGCATCGATTCTAGAGGAAGAACAGAAACATGACTTACTTAAAACTCAAGTACAAATTGCTGAAGTTAAACCTGAAGGCGGAGTGCCTCCAGAAGCAGTGGAAGAAAAGAAACCGCCAGTGATGGAGGTGGAAGATTTACCAGCCAGCGCACCTCGGCGTTTGCCTAAAGAAGATGATGGGATGACTCAAAAAATGAAAGTGCAGCCACAGGCACCAGGCATGGCAAAGCCTGATCAGACGGAATCTGGAAAGGAAAAAACAGAAAAGGAAGATGACAAATCAGACACTTCAAGTTCTCAGCAGCCGAAAAGCCCACAAGGTCTTAGTGACACAGGATATTCTTCTGATGGAATATCAAGTTCACTTGGTGAAATTCCAAGTCTTATTCCCAGTGATGAAAAGGATTTGCTCAAGGGACTCAAAAAGGACTCCTTTTCACAAGAAAGCAGCCCTTCCAGCCCCTCAGATTTGGCTAAGTTAGAAAGTACAGTCCTATCTATTTTAGAAGCTCAGGCAAGTACACTTGTTGAAGAAAAGTCAGAAAAGAAAACACAGCCCCATGAGGTTTCTCCTGAGCAGCCTAAGGACCAGCAGAAAACTCAGAGTTTAGTGGAAAAACTGGAATCTACAGTTTCAGAGGAGGAGCTCAAAGAGAGTCAAGAAGAAGGAGACACTTTTAAAAAAGAGAGCCAACAAGACATTCCTTCCAGAAAGGACCAAGAAAAGCCTGAATTTGTTGACGAGTTGGCTACGAGGAGACAGCCTTATGATTCAATTGAAGACAGCAGTGAAAGCGAAAACTCACCTGTTCCGCAAAGAAAAGGGAGGACCAGTGTTGGTTCATCAAGCAGTGATGAGTATAAACAGGAAGACAGCCAAGGATCAGGGGAAGAGGAGGACTTCATTCGAAAGCAAATCATAGAAATGAGTGCTGATGAAGATGTTTCAGATTCTGAAGACGATGAGTTCATTAGGAACCAGCTCAAAGAGATTAGCAGTAGTATAGAAAGCCAGAAGAAGGAAGAAACCAGAGGGAAGGGGAAAGGAACAGGAGGGAAACACAGGCGACTGACGCGAAAAAGTAGTGCAAGCTTTGATGACGAGGCAGGAAGACGCCATTCCTGGCATGATGAAGATGATGAGACTTTTGATGAAAGTCCTGAGCTTAAATACAGAGAAACTAAAAGTCAGGAGAGTGAAGAACTTGTAGTTGCCGGAGGAGGAGGACTCCGTCGATTTAAAACAATTGAACTCAACAGCACGATAGCCGATAAATACTCTGCAGAGTCATCACAGAAAAAAACAGCTTTGTATTTTGATGACGAGCCAGAATTAGAAATGGAAAGCCTGACAGACTCTCCAGAAGATCGATCAAGGGGGGAAGGATCTTCTAGTCTTCATGCTTCCAGCTTCACTCCTGGCACATCCCCTACATCCGTTTCTTCTCTTGATGAAGACAGTGATAGTAGTCCAAGTCACAAAAAAGGAGAGAGCAAACAACAACGCAAAGCTCGACATAGATCACATGGCCCTCTTTTACCTACCATTGAAGATTCTTCAGAGGAAGAAGAATTGAGAGAAGAAGAAGAATTATTGAAGGAGCAAGAAAAGCAACGGGAATTAGAACAGCAGCAAAGAAAGAGTTCTAGTAAGAAATCAAAGAAAGACAAAGATGAACTTCGAGCTCAGAGAAGGAGGGAAAGACCAAAGACACCACCCAGTAATCTCTCTCCCATCGAAGACGCATCTCCAACAGAAGAATTACGTCAGGCTGCAGAAATGGAGGAGCTCCATCGATCTTCGTGTTCTGAATATTCACCTAGCATAGAGTCAGACCCAGAAGGCTTTGAAATAAGCCCAGAAAAAATAATCGAAGTACAAAAAGTTTATAAATTGCCCACAGCTGTGTCTTTATACTCACCGACAGATGAGCAATCTATTATGCAGAAAGAAGGTGGCCAAAAGGCATTAAAAAGTGCTGAGGAGATGTATGAAGAAATGATGCATAAAAGCCAGAAATATAAAGCTTTTCCAGCTGCAAGTGAACGAGACGAAATGTTTGAAAAAGAGCCTTTGTATGGTGGGATGCTAATAGAAGATTATATTTATGAGTCTTTAGTAGAAGACACATACAATGGTTCAGTTGACAGCAGTCTGCTCACAGGGCAAGAAGAAGAAAATGGATTTTTGCAGCAGAGAGAGAGAGAGCAAAACATGAGACTTCCAGAACAGATTTATGAAGATCCCATGCAGAAAATCACAGCCCTCCAGAAAGAGTTTTATGAGTTAGAAAATTTACATGCTGTTTTACCTCAAGAAGACATCGTTTCAAGTTCTTTTATCATCCCAGAAAGTCATGAGATTGTCGATCTGGGTAGTATGGTAACTTCTACCAGTGAAGAAAAAAAATTATTAGATGCTGATGCTGCCTATGAAGAACTCATGAAAAGACAACAGATGCAGTTAACACCTGGATCTAGTCCAACCCAGCCCCTCATCAGAGACGATATGACAGAGTCCACTGTGGACTTTGATAGGGTACCTGATGCATCTTTGACATCAAGTGTTCTCTCGGGAGCATCTCTTACAGATTCAACCAGCAGCACAACACTCTCCATCCCAGATGTTAAAATAACCCAACATTTTTCAGCAGAAGAAATTGAGGATGAATATGTGACTGATTATACAAGAGAAATTCAAGAGATAATTGCTCATGAATCACTGATTTTGACCTATTCTGAACCTTCAGAAAGTGCTACATCAGTGCCACCCTCTGACACACCCTCTCTCACATCATCTGTTTCTTCAGTTTGTACCACAGATAGCTCCTCACCCATTACTACCCTGGATAGCATGACCACAGTTTATACTGAGCCAGTGGACATTGTAGCTAAATTTGAAGATGCTGAGGAAATTTCTTCATCAACATATTTCCCAGGCAGCATTATAGACTATCCAGAAGACATAAGTATACCTTTAGATCAGACAACCATACAGGATAGAACTAGTAAAGATCACATTGTGATTTCCTTATCTGATATAGAACCTTCTCTCATAGAATCTGTAGGAACTAAACTGGGGGGGCTAATTGCTGACACTGTTTCTACTGACTTATCTATATCTGAAAAAGATGCAGCGAAGAAGGCCAGAAAGGAAACAGGGGATGGACTTATTCTGGAAGTTTTGGAAGCTTATAGAGATAGTAGGAAGGAGTCTGAGGCTGAACTGACAGAAATTAGCTTACCTGACACTGTGTTTGATCAGACACCTTCTTCTGTAAAAACCCTTCCAATGAAGGAGCAGGTTTCAACGACATGCTTTTTACCTGAAGAGGTTTTGGGTCAAGCAAAACCTGCATCTCAGCTACCATCTGGCACTCCTCCCATTTTCTCTCTTCCAACTAAAACTCGTCCATTCCTTCGAAGTTCTTCTTTGGACATATCAGCCCAACCCCCTCCGCCTCCTCCTCCCCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTCCACCAACCTCACCTAAACCAACTATTCACCCTAGAAAAAAGTTAGCGGTTACAGCTCCAGTGACTGCAACTACAGCAGCTACATCTCTAGTAGATTCTGTTACTACAGTGGAGACCACGTCTGCTCCCAGAAGTGATGGGTTACCTATGACAAAAGTGTATACCACTGCACCTCCTCCTGTTCCTCCTAAGCCATCTTTAATTCCATCTGGACTTGTATTTACACATAGACCCGAACCAAGCAAACCTCCACTTGCTCCTAAACCAGCAGTTCCTCAACCTCCAGTCACTACCCCAAAACTAACAGATACATACCCCAAACCAACAGGTCTACCTTTAACTACAAGTATGACATTAAATTTAGTGACATCAGCAGACTATAAGTTGCCTTCCCCTACCTCTCCACTTTCCCCTCACTCTAACAAGTCCTCGCCAAGATTTTCCAAGTCTCTTATGGAAACTTATGTGGTTATCACATTGCCATCTGAACCTGGCACTCCAACAGATTCTTCACCTAGTCAAGCTATTACCAGTTGGCCATTGGGATCACCCCCCAAAGATCTGATTTCCATTGAACCAGTATTTTCTGTAGTTCCTCCTGTGACAGCTGTGGAAATATCAACTTCTTCACAACAGAGCCTATACATCTCCAGAGCTTTGGAGACATTTGCTGCTATCCCAGTCACAACACTGTCTTCATTTCAAGCAACTTCAGCTTCAGTTACACAGTCTCACCCAACTGAAGTTTCCAAGGCTGAGGTTCCAACAGCAAGAAGTACAGTCCCTAGTGTTGGTCTCAGCAGTGTCTCTATATCCTTTCCTCCAGAACCTCTTGCTCTAGATCACCTCCGTTTAGAGAAGCAGCAGCATAAAGAAGATGTCCAGTTGCAACTTGTTGGTGATGCCATTGATCTGCGTACAGTACCCAAAGTAGATGTTAAAGCGACTGAAAAATGTATGGATCTTTCTGCCTCTGCAGTGGATGTGAAGAGGCAGACCACAACAAGTGAAATGTATGGGAGACAAATTAGTGCTGTCCAACCCTCAATTATAAATCTCAGCGCAACTTCATCAGGAGTGACTCCTATATCCCTGGTCACCGAGACACTGACTGTTGTTACATGCACAGCTACTGCAAGTTACACCACAGGCACAGAAAGCCTAGTGGGTCTAGAACTTGCAACAGCAGCACCACTCCAGCTTACTACATCAAAGCATGTGGAGCCACTATACAGAGTTCCAAGTGGCCAGACCTTTCCTACAATTAGGGAGGAAGCGCCAATAAACTTATCTTTAAGTACTTCTGCACACCCAGTGACATCAGCTCCTACGAAACCTGTTACCGCACCTCCTGTTGGTGTCACAAATGGATGGACTGATAGCTCCACATCCCAGAGCATCACTGATGGGGAAGTAGTGGATCTCAGTACCTCCAAAACTCATAGAACAGTTGTAACAATGGATGAAGCTTCTTCAAATGTAGTGACTAAAATAATAGAAGATGATGAAAAACCTGTTGATCTGACTGCAGGAAGAAGAGCCGTGTGCTGTGATGTGGTTTATAAGTTACCCTTTGGAAGAAGCTGCACAGCACAGCAGCCTGCAACCACTCTTCCTGAAGATCGTTTTGGTTATAGGGATGATCACTATCAATATGATCGATCAGGGCCATATGGTTATAGAGGGATTGGGGGAATGAAACCTTCCATGTCTGACACTAATTTAGCAGAAGCTGGACATTTTTTCTATAAAAGTAAGAATGCTTTTGATTATTCTGGAGGAACTGATGCAGCAGTAGATCTTACTTCAGGGAGAATTACTACAGGTGAGGTAATGGATTATTCAAGCAAGACTACAGGTCCATATCCAGAAACTCGACAAGTCATTTCAGGAGTTGGGATTAGTACCCCGCAGTATTCCACAGCAAGAATGACTCCACCTCCAGGACCCCAGTATGGTGTGGGGAGTGTTTTGAGGTCGTCTAATGGGGTTGTCTATTCTTCAGTAGCAACTCCAATTCCTTCCACGTTTGCTATCACCACACAGCCTGGCTCCATTTTCAGCACCACCATGAGGGATTTGTCTGGTGTGCACACAAATGACGCCGTGACTTCCTTGTCCGCCCTGCACCAAAGCCAGCCCATGCCTAGATCCTATTTCCTAACAACTGGTGCATCTGAAACAGACATTGAAGTCACTGGTATTGATATCAGTGCCAGTTTGCAGACTATCACTATGGAGACTCTCACAGCTGAGACAATAGACTCAGTTCCCACCCTGACCACAGCGTCTGAAGTATTTTCGGAAGTGGTGGGAGAGGAAAGTGCACTTTTAATCATCCCCGAGGAAGATAAGCAACAACAACAGCTAGACTTGGAGCGTGAGCTCTTGGAACTGGAAAAGATCAAGCAACAGCGTTTTGCTGAGGAGTTGGAGTGGGAACGGCAGGAGATTCAAAGGTTCCGAGAACAGGAAAAGATCATGGTTCAAAAGAAGCTGGAGGAGCTGCAGTCAATGAAGCAACACCTCCTCTATCAGCAAGAAGAGGAGCGGCAAGCCCAGTTCATGATGAGGCAGGAGACGTTAGCACAGCAACAGTTGCAGCTGGAACAGATCCAACAGCTGCAGCAACAGCTTCACCAGCAGCTGGAGGAGCAGAAGATTCGCCAGGTCTACCAATATAACTATGACCCTTCCGGAACTGCCTCTCCACAGACCACTGCAGACCAGGCCATCCTGGAAGGTCAGTATGTTGCCCCAGAAGGTGGTCAGTTCTGGGCAACCGAAGATGCAACCACCACAGCCTCAGCTGTGGTGGCAATTGAAATACCACAGAGCCAGGGATGGTACACAGTTCAGTCTGATGGGGTGACTCAGTACATTGCCCCACCTGGCATCCTGAGTACTGTTTCAGAAATACCTCTGACAGATGTAATTGTCAAAGAGGAGAAACAACCCAAGAAGAGAAGTTCTGGAGCTAAAGTCCGTGGCCAGTACGACGAGATGGGGGAAAATCTGGCAGATGACCCCCGCTGCTTTAAAAAGATAGTGGACAGTGGAGTACAGACTGATGATGAAGATTCAGCAGATCGGAGTTATGTGAGTAGGAGAAGGAGAACTAAAAAGAGTGTTGATACAAGTGTCCAGACGGATGACGAAGATCAGGATGAATGGGACATGCCTACTAGATCTAGGAGGAAAGCTCGCGTAGGGAAATATGGTGACAGCCCTGCAGAGGCGGACAAGGCCAAACCCCCTTCCAAAGTCTCCAGCATAGCCGTTCAAACAGTAGCAGAGATATCTGTGCAGACTGAACCAGTTGGAACCATAAGAACACCTTCGATACGGGCACGCGTGGATGCCAAGGTAGAAATAATTAAACACATTTCAGCACCTGAAAAGACTTACAAAGGGGGCAGTTTAGGATGTCAAACAGAAGCAGATTCAGACACACAAAGTCCTCAATATCTGAGTGCCACCTCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAAATTGGTTATTCATCTCACCTTCGGGCAGATTCCACACTACAGCTGGCTCCTTCCCCACCCAAATCTCCAAAAGTCCTTTATTCTCCCATCTCACCACTTTCACCAGGCAAAGCCTTAGAATCAGCCTTTGTACCTTATGAGAAACCCCTCCCTGATGATATAAGTCCACAAAAAGTACTGCATCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCCAAGATGATGCAGCGCTCCATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGTATACCGAGGGCTACACGGCAAAAGGTTCTCAAACCGCAACAACCTCTGGCACTCAGAAAAAAGTGAAGAGAACTCTTCCAAACCCACCACCTGAAGAGACCTCCACAGGAACTCAGTCAGCCTTTAGCACAATGGGCACAGTCTCCAGGAGAAGGATCTGCAGAACCAATACGATGGCCCGAGCCAAGATTCTCCAGGATATAGACAGAGAGCTTGATCTTGTGGAGAGGGAATCTGCCAAGCTTAGGAAGAAACAAGCAGAACTTGATGAGGAAGAAAAGGAGATTGATGCTAAGTTACGGTACCTAGAAATGGGGATTAACAGGAGGAAAGAGGCCTTATTAAAGGAGAGAGAAAAGAGAGAGAGAGCCTATCTCCAGGGAGTAGCTGAGGATCGTGATTACATGTCCGACAGTGAGGTCAGCAGCGCCAGACCAACCCGAATTGAAAGTCAGCATGCCATTGAGCGACCAAGAACTGCTCCCCAAACTGAATTCAACCAGTTTATTCCACCACAAACCCAAACAGAATCTCAGCTAGTCCCTCCTACGAGTCCTTATACCCAGTACCAATACTCTTCCCCTGCTCTTCCTACTCAAGCACCTACCCCATACACCCAACAATCCCACTTTCAGCAACAGACTCTGTACCATCAGGAAGTTTCACCTTATCAGACTCAGCCAACCTTCCAAGCTGTGGCAACAATGTCTTTCACACCTCAAGCTCAACCTACACCAACCCCACAACCTTCTTATCAGTTACCATCACAGATGATGGTGATACAACAAAAGCCACGGCAAACTGCATTATATTTGGAGCCCAAGATAACTTCAAACTATGAGGTGATTCGCAACCAACCCCTGATGATAGCACCTGTTTCTACTGATAGTACATACGCTGTTTCCCATCTCGGTAGTAAGTACAACAGCTTAGATTTGAGAATAGGATTGGAGGAAAGAAGTAGCATGGCAAGCAGTCCAATATCAAGCATATCTGCAGATTCTTTCTATGCAGATATTGACCATCATACTTCGCGAAATTATGTCTTAATTGATGACATTGGTGAGATTACCAAAGGAACAGCAGCTCTAAGCACTGCGTTTAGCCTTCATGAAAAAGATCTGTCAAAAACAGACCGTCTCCTCCGAACCACTGAGACACGTAGGTCTCAAGAAGTGACAGATTTCCTAGCACCTCTGCAGACTTCATCCAGATTGCATAGCTACGTGAAAGCAGAGGAGGACCCAATGGAGGATCCTTATGAGTTAAAGCTTCTGAAACAACAGATTAAACAAGAATTCCGTAGAGGAGCAGAGAGCTTAGATCACCTTGCTGGTCTTTCCCATTATTACCATGCTGATACTAGTTACAGACATTTTCCAAAATCTGAGAAGTACAGCATTAGTAGACTCACACTTGAAAAACAAGCAGCAAAACAACTACCAGCTGCCATACTTTATCAAAAGCAGTCAAAGCATAAGAAATCACTAATTGACCCTAAAATGTCAAAATTCTCACCTATTCAAGAAAGTAGAGACCTTGAACCTGATTATTCGAGCTATATGACTTCAAGCACTTCATCTATTGGTGGCATTTCTTCCAGGGCAAGGCTTCTTCAAGATGATATTACTTTTGGCCTCAGAAAAAATATTACAGACCAACAAAAATTTATGGGATCATCTCTTGGCACAGGACTGGGCACCTTAGGAAATACCATCCGGTCAGCTCTGCAGGATGAAGCAGATAAGCCATACAGCAGTGGCAGCAGGTCAAGACCTTCTTCCAGACCTTCCTCTGTCTATGGGCTAGATTTATCCATTAAAAGAGATTCTTCTAGCTCTTCTCTAAGACTGAAAGCTCAAGAGGCTGAAGCTCTAGATGTTTCCTTTAGTCATGCATCACCTTCTGGGAGAACTAAGCCTACTAGTTTGCCTATTAGCCAGAGTAGAGGAAGAATACCAATTGTGGCCCAGAATTCTGAAGAGGAAAGTCCACTCAGTCCTGTTGGACAGCCAATGGGAATGGCCAGGGCTGCTGCTGGACCCCTGCCACCAATATCTGCAGACACCAGGGACCAGTTCGGATCCAGTCACTCTTTGCCTGAAGTTCAACAACACATGAGAGAAGAATCACGGACTCGAGGCTATGACCGTGACATAGCATTCATCATGGATGACTTCCAACATGCCATGTCAGACAGTGAAGCCTATCACCTCCGTCGTGAAGAAACAGATTGGTTTGACAAACCCAGGGAGTCTCGTTTGGACAATGGACATGGTCTAGATCGAAAACTGCCAGAAAGATTGGTCCACTCTAGACCACTCAGTCAACACCAAGAGCAAATTATACAGATGGATGGGAAAACTGTGCACTACATCTTTCCACATGCAAGGATAAAAATAACAAGAGACTCTAAGGATCACACAGTTTCAGGTAACGGATTAGGAATTAGAATTGTGGGTGGTAAAGAAATCCCTGGACATAGCGGAGAAATTGGAGCCTATATTGCCAAGATTCTTCCTGGGGGAAGTGCCGAACAGACAGGGAAACTTGTGGAAGATGGCATGGCAGTGATCAAGGTTGGAGAACAAGAAACACACCACACAGATGAGTGAGCTTCCTTGTAC EMBV3_39598 CAGATGCAATTGGACAACGAGGGGAAAGGCCAGTACAATGAGATGTGAGGGGAGATTTGG Gene BVT0102_145636 + 0 NULL GK000019.2:9125253-9178599 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095032 1 XLOC_057629 NonCoding TCONS_00095032 XLOC_057629 NonCoding NonCoding - 19:9125312-9129622 - TSS70973 4310 1 TCONS_00095032_9 144 0.358468677494199 1 0 0.00124061109719119 0.00124031757294022 0.000901781724937336 0.000568381228754331 0.000973690069577586 0.000589674712558564 0.000308498760461115 0.000637673571979171 0.000497023320471659 5.60054833916794e-05 8.23257168203293e-05 9.95548797260866e-05 8.32159167583578e-05 0.00010805019109146 4.21182094340293e-05 0.00110916232484633 0.000832041204827938 0.000366758080135376 0.00083023001318725 0.00201560378090869 0.000361681367324103 0.000499303146459297 0.000170283951115398 0.000855734050450983 0.00134229237485261 0.00111321648870079 0.000683227220769379 0.000227315488915311 5.85704798069389e-05 0.000486140769681517 XM_005193456.1 LOC100852077 PREDICTED: Bos taurus leukocyte immunoglobulin-like receptor subfamily A member 5-like (LOC100852077), transcript variant X2, 3e-41 176 78.74 0.0475638051044084 XM_005262449.1 THOC2 PREDICTED: Homo sapiens THO complex 2 (THOC2), transcript variant 1e-44 187 72.32 0.0795823665893271 0 noncoding 0 0 0 0 0.0292054871969119 0.821407284505742 0.019489120629005 0.799757847438345 AGATATGTTAAGTCCTTTCATATTTATTAAACTATCTGTAACACATTGGAATGCTACACAGTCACTTAAAAATATGCTCTTTATCAACTGTCTCTGAAAGGGGATACAAAACCTCTTAATAGTAATTGCTTCTAAGGAGGGAACCCAGTGGTGTGGGAACAGGAATGGGAGGAATAATTTTCACTGTTTGTACTTTAGGAATGTTGGATTATGTGAATCTATCATCAAAGCTAGGGATTGGCAAACTGCAATCCACAAGCCAAATCTAACCCACTGCCTGTTTAAAGTTTTGGTGGAACGCCTTCATGCCCATTTGTTTACATACTGGCTATGGCTGCTTTCATTCTGCAATGGCAGAGTTCAGTCATTGAAACAATTACATACACTACAAACATGATGTCATATGGCCCACAAAGCCTAAAATATTTACTATCTGACCTTCTATGGGAATTTGCTGATATCAATTTAGATTTTTTAAAAATAGAAAAGTAAACTGACATCAAAAGATTAAAAGATACCCCCAAAAGAACTGAAAACACCTGTCCACACAAAAACTTAAATGTTAATGTTCACAGCAGCACTAGTCACAATAGGCAAAAAGTAGAACCAACCCAAAAGTCACTCGACAAATGAATACATTAAACAAAAGATATATCCACACAATGGAACACTGCTTGGCCAAAAAAAGGAATGAAATGTTGATAAATGTTAAACACAGATGAACCTTGAAAACATTATGCTAAGTGAAAGAAGCCAGACATAAAAGGCCACATTTCATTTATGTGATACACATTATGATTTCATTTATGTGATATGTCCAGACAAGGCAAATTCACAGTGACAGAAAATACATGAGGGGTTTACAGGGGTTGCGGAGGAAGGAAGAACAAAGAGTGACTGCAAGTGGGTTTCTTTGAGGAGTGATGAAAATGTTCTGGAATTAGATAATGGTGATAGTTGTATAACTCTTTGAATATATTAAAACCAGTGAATTGTATACCATCACCAAGTGGAAGGCATTTCACAGTAGGGGAAAGTTCTACATCCCAATTATTCCAAACATCCATGAGATCTTAGGTAAGTTTCTTTCCCTGTCTGGTCCTTAATTTCCTTCTCTATAATACAGATGCAATTGGACAACGAGGGGAAAGGCCAGTACAATGAGATGTGAGGGGAGATTTGGGGGGCCTGACTTCCCAGAATCCTTTATTCTTTCTTCAAGATTCATAATCACTGACTCTAAAAACCACTATTTTCATCATCATCATGTTCCAATTTCAAAACACTTTCACATACATGTCAGTTGATACTCATAACCACCCTTTAGGGAAGACAGGTATTATCCCCATCTTACAGATGAAGAAATTGAACTTCAAATGACTTGCCAAAGTTCATACAGTGGTTAAATGTAGGAGCTGGGACTCAGTCCTAGGTTCTGTCCACACCACCACACTGGCCTCTCTCTAAAGCCCTAGACACCACTGTCCAGCATTCTCATTACAAACTACACATCGTTTGGATAAAGCAAGGGAGGAGAGGCACAAGGACTTGGGCCCTCCTCGGCCTTTTCTTATGAACCTCTCTGTTTCGGCATAGCAGCAGCCTGTGCATAGGAGTAGACGTACACTGGTGAGGACACCAAGCCCACGGTGTCACAGAGACGTACATAAAGGTATACAGGACCTGCTCGACAGGTGACAGGTCACTCCTCGTTACCAGAATGCTGGGGAAGCTGTGCCTTAAGTTCAGGGGAGACCTGAGAGTTCAGAACTCTGGGGGTCTGCTCTCTCCTAAATCTAGAAGACTCATTAACCCTTCTCATGAAATTTCTAGAAGGGACAGCTCCTCAGTGCTTAATAGACAAGAGAAATGAGAAGGGAGGGCCTAGGAATTATCCTCATTGCCTTTGCTGAAGTAGAGTCTAGGAAAGGGAATAACAGTGAATAAGGCATTCAGTCCTAAGCTCAGAGAACTGGACCTAAATCTCAAGGAATATCTTTGAGACGACTGCTGTCAAACCCAGGTCAGTCCTTGTAAGTCAGTGTCTGAGCACCAGTAACACTACCAGCTATGTGCGCTTCAGCAGGTCATTCACCCTCCCTGATTCAGTTTGCATATCCAAAACTGTGGCTAATGACTGCTGGGGTCTAGCTCAGAGGGGATTTCAGTGGCATAAACTGAAATGCTTTAAAAATAAAATGTACTTTATGAACACTCTTTCATTCTCCCATGGCTGCCAAGAAAGAAGGGCTGAACACACTTGGGGAGTGACCCACTGACGACTTTCCAGAGCTTGCCAGCAAGGGGGAGTCAAGCCAAAGGCTAAAGTCTCTTCAGAAAAAGCCAGGTTGCCCATGTTTGCTTGTCCTTTTTTTTCATTTTACCAATAACATTTATCAAGTATTTCCTACAGCATACAATGTTGTTCTGGGAGCTTGAAGATTAAAGCAGTGAAAAAGAAGAAATGGTTCTGCTCTCAAAAAGCTTATTTTCTACTTGTGAGAGATGAATAAATTAATGAATGTCAAGCTTAGGGCAGGTGCTGTGCTGAATTTAACTGGGTAAGATTAATAGTGATAGGAGAGTGGTACTGTTTCCTATAGGATGTCAGAAAGCCCCTCTCATAAGAGGGTGTTTGAACAAAGACGTGAAGGAAGGGGATAGTTTAGGAAACAGCCACACCCCTGGTCTAAGTTCTGGGGAGAGACAGACACATTGTCCAGGGCAACAGAATTTCCTACCATGCTGGTTTGGTTTGCCCTTCTTGGATTCATCTCCATACTTTTCTTCCTGCTATGCTCCCTGGGGAGAGGCGGGCTGACCCCTAGACTGGATCTCTGGGTCATCCTTGCCATCTTCTGCCTGTTAGGTTCAGCCAAAAGGAGGCCCCAGAAAATTGGAGTACAGGATGGAAGAAGTGGAATACTGATGCTCCAGCTTTCTCAGCTCTGACTGGCTGCATCCCTCTGCCACTGCTCCCATCAGCTTTCCACAGCCCTTTTGTAGTCCATCCTCCCATGCGATCCTCCTGGGTCCCAGTGGGTAGCGGCTCGTCAGGAGTCTTGCAGGATTCACCTAGATGAGCACCAACTACCTAGCTGGGCCAGAGTGCCTTGTCCATAGTTGCCACCTAGACTGCCCCTCCCATCAGGACAGGAAGATGAGTTTTGACCCTAGAGGCATCCATCATAGATATTGTGGACCGTGGCCTCACTCTCCTCCCTCAAACTCCAGTTCTGTCGAATTCTTCACACCAGCAAAGGTAGGAACAGAAATTGAGGTTCTAGAGGGCCCCCCCCATTACTTCCTTAGGACCTCACTGCCCTGGAGGCTTTTCTCCCTAAGATCCAGCCCATAGACTTCCTATGTGAAGGAACTTGACCTACCTAACTCCCAAAACCAACAGCTCATTGCCCAGTTCATTTCCTTGATAGTATTTATCACTATTCCCTGTAGCTCAAACGGTGAAGAATCTGCCTGCAACACAGGAAACCCAGGTTCGATTCCTGGGTCGGGAAGATCCTCTGGAGAAGGGAATGACAATCCATTCCAGTATTTTTGCCTAGAGAATCTCATGGTTAGAGGACCCTGACAGGCTACAGTCTGTGGGTCACCAATCGCCAAGAGTCAGATACACCTGAGTGACTAACACTACTACTATTTATCACTACTGGCTTTTCATTGTGTATGTCAGCTCTGTCCACTAGAATGTACATGTCATGAAAGAAAACTTTGCTGTTTTATTCTCCTTTGTGAACAGCATCTTAGGCTCAAGTATAAAACTCAAATGTTTCTCAGTGAATGAGAACAGAAATGAGTATAAAGCATCTCTGCTCCCTAGCACCCTCCACAAGGATTATAGCCATAAGCCTAGACATAAATGGCTTAGGGTCACTGGCCTGGGCAGCTACTCTCAGAAGCATCTTAGTACCGCTGACTTCTCCAGGTGTATGTGGGCAGGAGCCCCAAGCAAGCCAAAAGATAACCCAGGAGTCAGAGAACTACTCAGGTTCCATCTTGCTGAAATGAAGGCCCTCGGGTTCTCCATTCCCAAGTGGCTAGAGAAGGATTTAGCTGAGACACGGTCTTCCGGTCTCAACATCTATCATACAGAAGAATCAAAATGTGGCTCACCAAACCATCTCCACCAATAACCCAAGAAATCTCGTAGGTGAGTGCTGCTGGTTATTTTCCCTCACTTAAGGGCCCCAAGCCTTGGCCCTCCAACTAAGACCGGATTCAGACCAATCAGTATCTCTTTAGCCCCATTCCACTCCATACTATATACCCACCCCACCCATGTGTGGCAC TCONS_00092122 r 3' 54 TCONS_00092122 r 3' 4363 EMBV3_25774 ATAATCACCTCAGCATACATCTGAAGAAAGAAAACTCAAAAGTCTTTTGTCTTGCCTTTT Gene GeneID:524142|OPA1:XM_002684831:161_cdna Constitutive 2 NULL GeneID:524142 1 GENE OPA1 NULL optic atrophy 1 (autosomal dominant) EMBV3_42014 GTGGAGAACAGCATGATCATCAATGTGCTGGGTCTACAAGAACAGCGAGGAACTTCGGTC Variant GeneID:617807|PSMF1:NM_001076478:1330_cdna 405^487 3 EMBV3_34748 GeneID:617807 13 GENE PSMF1 NULL proteasome (prosome, macropain) inhibitor subunit 1 (PI31) EMBV3_38236 GTGGCTGGTCAGGCCAGAAAATGCTCACTGGCACCTTCGTTTGGTTCCTGGAGTAAATTA Gene GeneID:614210|RNF166:NM_001099134:415_cdna Constitutive 2 NULL GeneID:614210 18 GENE RNF166 MGC160024 ring finger protein 166 EMBV3_15429 GACCGTTAGCCACCTGCCAGACTGAAGGCCAGAGGCAACTTGTAAAATTAGGTGCGATCT Gene BVV0102_116305 + 0 NULL GK000027.2:32803515-32823069 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04253 AAGGCAGAGATCTGATTTCATTTGCAGCCCCAAGCTGCCATTTCTGAGGCTCTGAGGACC Gene BVV0102_078979 + 1 EMBV3_11192 GK000010.2:13980373-13992196 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00012718 TCONS_00012720 TCONS_00012712 TCONS_00012715 TCONS_00012713 TCONS_00012714 1 XLOC_007914 Coding TCONS_00012720 XLOC_007914 Coding Coding SMAD3 10:13879944-13984625 j TSS9592 5761 1 TCONS_00012720_4 320 9 0.94505158578525 0.001634647261765 0.000215226232976425 0.000862750835085722 0.0007912673382853 0.000713273398110633 5.45965396877504e-05 0.000756717837113532 0.000791381625434899 0.00105452516151123 9.39247485209241e-05 9.54368183965261e-05 9.3712479956624e-05 0.000397066891000494 0.000193875392060527 0.000234105760120665 8.9449384169905e-09 1.28647684449559e-13 3.31970133639573e-07 0.000927544109114249 0.00119127562466571 0.000328993454168086 5.8925062651086e-17 1.8727445700841e-15 9.94090781364687e-07 0.00126034293737215 0.000879896603127846 0.00106599066941563 7.89662468786302e-05 1.40747242924622e-51 4.20281510059515e-05 NM_001205805.1 SMAD3 Bos taurus SMAD family member 3 (SMAD3), mRNA. 0.0 1954 100.00 0.187814615518139 NM_001145103.1 SMAD3 Homo sapiens SMAD family member 3 (SMAD3), transcript variant 3, 0.0 2682 78.55 0.542093386564833 TCONS_00012720_4 sp|P84022|SMAD3_HUMAN SMAD3_HUMAN Mothers against decapentaplegic homolog 3; 0.0 671 99.69 0.996875 2 coding 0 0 0 0 0.0783968050194087 0.709628878194767 0.0595212812936919 0.275684596585949 ACAAGAGCAGCAGAGCTATGGGGCTGCGTGGTGGAAGCAGGCTCGAAGGAAACACACGCGGTATTTTGCTGCTTTTTCACACGTTGTAGTTGGGCACAGCTTTAGGAAGGCTGTTTCAGAACCCGCCCCACCTCCACAAACCAGGGAGCAGCTGTTCTGGGGCGGGGGTGGTGGAGGGGACTGGCACCCACTGCGGCTCACACCTGGGGTCTATCAGCACCCAGAAGCACATGGTATGGACCAGGTCGCTCAAACCTCTGTTGGGCATCCTTGTGTAACACAGAGCGCTCAGTGAACTGAGAAGGGCAAGCCCTTCCCCAGGGACCCTCAGCACTCGGCCCCACAGAGCTCCCGGGAAACCCCAGGAAACTCTGTGACCCACAGCACGGTCCTGAGCGTGAACAAGCCAACAACTTTCTCTTGCAAGGTCCCTGGATGGCCGGCTGCAGGTGTCCCACCGGAAGGGGCTCCCCCACGTCATCTACTGCCGCCTGTGGCGATGGCCCGACCTGCACAGCCACCACGAGCTGCGGGCCATGGAGCTGTGTGAGTTCGCCTTCAACATGAAGAAGGACGAGGTCTGCGTGAATCCCTACCACTATCAGAGGGTAGAGACCCCAGTTCTACCTCCTGTGTTGGTGCCCCGCCACACAGAGATCCCGGCCGAGTTCCCCCCGCTGGATGACTACAGCCATTCCATCCCCGAAAACACTAACTTCCCTGCCGGCATCGAGCCCCAGAGCAATATTCCAGAAACCCCACCCCCAGGCTACCTGAGTGAAGATGGAGAGACCAGTGACCACCAGATGAACCACAGCATGGATGCAGGTTCTCCAAACCTCTCCCCGAATCCGATGTCCCCAACACACAATAACTTGGACCTGCAGCCCGTCACCTACTGTGAGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGCTCAACCAGCGCGTCGGGGAGACATTCCACGCCTCCCAGCCGTCCATGACGGTGGATGGCTTCACCGACCCCTCCAACTCGGAGCGCTTCTGCCTGGGGCTGCTCTCCAACGTCAACCGGAACGCAGCTGTGGAGCTGACACGGAGGCATATCGGGCGGGGTGTGCGGCTGTACTACATTGGAGGGGAGGTCTTCGCAGAATGCCTCAGTGACAGCGCCATCTTTGTGCAGTCTCCCAACTGTAACCAGCGCTATGGCTGGCACCCAGCCACCGTCTGCAAGATTCCACCAGGATGCAACCTGAAGATCTTCAACAACCAGGAGTTTGCCGCCCTCTTGGCTCAGTCTGTCAACCAGGGCTTCGAGGCCGTGTACCAGCTGACCCGCATGTGCACCATTCGCATGAGCTTTGTCAAAGGCTGGGGAGCCGAGTACAGGAGACAAACTGTGACCAGCACCCCCTGCTGGATTGAGCTGCACCTGAATGGACCTTTGCAGTGGCTTGACAAGGTCCTCACCCAGATGGGCTCCCCTAGCATCCGCTGCTCCAGCGTGTCTTAGGGACACTGCGAGTGAAGGGGGAGGGTAGGGAGGGTGGATTTGGGGAAGAGGGCCATGTAGGAGGTGGAGAAATCAGAACTCAACTCACTGGTGTCAAAAGAAGAAATTTTTCTCCCTCAACTAAAGTGGCATCAGCCTGTTTTCCAAAACACGAAAGCAAACCCAGAGGTGAATTTCTGTGAACAGCTGTCTGCTGAACACGGTGGCCCTTTGGCCCCAGTATGAAGGGTAAGAAATGGCTTCTGCTCTGGTGGCGTGAGCAAACAGGTAGTGTTTCACCACCTGCCCCTCCCCTGGTCCCCTTCTTTCTTAAAGACAGCAAACTGAGATGTCAGTGCCCAACAGGAACTGGCCCCCTGGTTAGGACTGGAGTGTGGACTTTGCCTTGGGTGCTCTGGGCAGGGAGAAGCTTGCAGGGGTCTGAGCACACCATGGGCCCAGCCCTCCCCTTCCACTGAATATTCCCAAACCCCAGCAGGAGCAGACCATGTACCTGGGCGCTGGATTGACTTGCGGCGGGGAAGGGGCTCGTCTGTCTCCACCTCTCTGAGCCTACTGATTGTGTCTAGAATCGAGCACATAGGGACCGGTGGCAAGGGGTGGAAAGACACCTCTTCTTTAAAAATGATCTTAAATTTGCCCTCATTTTCAGCAGTTGGCAGGATCTGTTGAGGCTCAGCACATACCCAACATACAGTTTGTATCATCATGTTAATCTCAAGAGAGATCCGAATCACGGGAAGTGTTCCCAGGAGGTAGCTGTCCATGAGGTGTGCAAGGGTGTCCGGTCACCTGTAAGAGCTCGCTCCGCTTTCTCATGCATTTGGCTGTATTGGTTGGTATAGTCAGTTGCGTTAATTAAATGAACTGTATCATATGGTCTTTTAAACATTTGATTTTTTAAAAAAACAAACACCCCGGGTGACACACTGACTGGGAAACCAGAGTGGGACCCAGCAACTTCTCTCCCAAAGTGAAGCTTTTTCCAGGTTTTGTTAAGACGACACCTGCCAGTACTTTTGGAAGCTGAAACTGACAAAAGCAAATTCACCAAGAGGGAAAGATCTCAGGCCGACAAAGAAATAAAAGGGCTATTAAAAAAAATTATTTTTACACCTTTGAAAACTGCAGAATTGGTGCCAAGAGGTCTGTCATCTTTCCCCTGAGGGATGAGATTATCTAGCTCACGGCAGAGGACCGGCAGTGACAACTCTAGCAGTTAGAATGTGTAGTAAGTATCGCTCCCGGTGGCAATTAGTGAGGAAACTACTATAGATTATTTCAACTGGAAAAAAAAGAGCCCCCTTATACTGACCTTTTGCAGAATGCAGCAGATGGAATTGTCACTTGCAATTGGTACTTTATTCTTTGCTGCTGTTTTTTGTATGAAATGAGTTATCCCATATTTTTTGCATGGTTTTCTACCAGGAAAAATAAAGGGATTTCCTATGGAAGTCCTGTATTATTCCAGGTGAAGGGAAGAAAGTTGTGTACTTTTGGCAGGTATAAACCTCAAATGTGATGACATTTGTGATGCTGTGTGGAGACACTGGGTGCTTCCTGGTGCCTTGCTCGCAGGACCCTAGGCCTCAGAAGCTCCAGCCCCGAAGTCCAGGTAGGAGGGCTGCTCACCATGCCTCCAGAGGACACAGCAGCAGGCAGGAGTGCCTTGCCAGACGTGGACTAGTGTTCACACAGGGCTGTTGTCAGAGTCCAGAGACACCACACAGCCCCTCACTCCACCTGAGGCCAGATGCTGTGGCTCTGAAGTTTCTGCCTGATGTGAAATGATCGTGGACTGCTTTTTACAGATACAAGAAATCATGTGAACCTCCTGGATGTGTGTTTCTGCCCCCGGTCAGGCCTGAGACTGGTGGTATGGCTTCTAACTTCAGTTTGGCCTAGGCTGGAGCCGTTGTGGTGCCCCTACTAAAAGCCACGGGGAGCAGTCTCCAGGGGCCCGTCATCTCCTGAGAGCACTCCCTATGGCACACAGCTGTCCTCCAGGTACTTGGGAGCTGGCTTCAGGTACAGCCCAATTTGGGTGATCTGGTTGGTCATGTCTGGTTGCATCTGGATGGCGTCTTAGAACCCACAATGCTGAAAGCTAAAGAATCTTTGTAGTAGGCATGGAGTTTTTGTGTTTTTTTTTCCCTAAAGCTACTTACTTGGCCTTTTTTCTTTATAACTAGACTGCTAAAGGAAGACGGGTGAGGAAAAAGTGGGTAAGACCACGTTCAGCACCCTTCAAAAGAAAATTTGGTTGTACCTAGAGGTTAGGATCTGGTTTCATTCCCATCATAGAGGCTGCGTAAGTGGCTTTGAGGCATGTGTGATATTAGTGTCCTACAAGTCATAAAAAGTAGTTTTAAAACCCTATTGCATAAAGGCATTTATACATTGAAAGACAGGACAGGTGAAGGGGCAGGAGGAGGGCGGTTCTCGGGGTGATGGCAGCTGCTGGAGGGTGCTTTTGGTGTCACTGCCCAGGCTGCAGGACATGCCTGCTCCCCGGCCCCGGGCTCCCCGCCAGGCCGCCCTCACCTTGCGGCTTGCGGCGATGCTGACCCGGGTGTGGCTACAGCGCAGGGGCCCTAGGTCCTGGCCTTGGCACCTCCCCTGGGAGCCAGCTTCTGTTCCCTTTCCTCTCCTCCCACACCCTCCCCACTCCTAACTTTATTTAGTACTGGGAGCCTTCCAGCGCAAGTAGGTAGCCGCCCTGGCAGTTCGGGTTACAGGCCTGTGCTGGCACGTCATCTCCACTGGCCACCTTCCTGGCAGGCTGCAGACCTGACATTTTGAGACAAACCCAGAGTCAGGAGCGGGGACTTTGACTCTTAGGAGGAACAGACAGCAGGGCAAGGCTGCTGGCAGACTCTTCCATTGTCCTTATGTTGTCTGTGAGGTTTTTTTTTAATCGTCCGTGGTGATTATTTTTTTAAATCATTGTTAACGTATTGGAATGAGCTGTAGCACATATCTTGTGCTTCAGTTTGTTTTTCTCCATCTCCCTCTGGCTTCCCGGAGTTTGGACATATTCCAGGGCTAAATGCTTTTACTCAAACCGCAGAAAAAAGTTTTCTTGAAGTAATGCGTGCATGTCATGCATGCATGCGAGTCATTTGGGGAGAAGGCAGAGATCTGATTTCATTTGCAGCCCCAAGCTGCCATTTCTGAGGCTCTGAGGACCTCTGCAGGGCCAGAGCTCCCATTAGGCCACTCTCTGTAGTCTGTAAGAGAAGGGAGGGACAGGAATTGGCATGCGCTCCTAGGACTGTTTATCAAGGGGGTTACCAGTAGCGAGAGGGTGCATGTTTGGTTCTGAACCCTGTATCTCACTGTGACTTCAAGTGGCAGAGTTGGGAGTTTTCTCCCTAATCTACATCTTTGCTAGAAGAAAACCTCAACATAGTCACTCTGGTATGGTATAGATGTTCCCTTCTAGAACCTTCCTTCAAGTAACAGTCTTTGAGGAGTATCCGCCACTTCTCAAGTGGGTAGGAAAGCAGAAAAATGTATGGATCAAAACTGAAGAGGCCTCTCTGATGGGAGAGTGGGGAGATGACTTGCTATACAAGCAACCTTTCAGAAACACGGCTATCACAAAGAAAAACTCATGTATTGTGTAAACTGGATTGAGAAATTCTCTCAAGTGATCCTGTAATTTTTTTTTATGCTGAAGTAATGTACACTCGAGCATTCTGGTGTTTTTATATTTATGTAATAATTTCTTAAAACCAAGACAGATAACTATTTAATTTTGGAAGAAAGTTGGAAACGGCTCTCCTCCCGAGGACAGTGGCTTGGCCCCCAGAGCCACCAACCCAGGCTGGCTCCCTGTGTGGCAGCATGTGAACACAGGCAGCTAGCTCAGGCCAACGCAGGCCCGTCCACAGGGGCCTCTGAACCCAGCCCCTCTCCCTTCCCAGGGGCGAGAACTGTACAGAGGGCTGGAGCCACCTGCCCCCAAGAAGCCTTCATTCACCTTCAGTGCTGCTGTTGCAACTAGGCTGTCCTGGGCGGGACTCCTGCTTGGGTGGGGAAGAGAACGGAGGATGCTGATTACCTTCCCTTCTCAGCCAGCCTGACCTTTTAACACCCTTTGTAAAAAGCATGTATGTATTTATAGTGTTTTAGACTTTTCTAACTTTTGTATCTTAAGAGCTGAGCACCTGTTTAAGCATTTACCCCTGTTGTTAAATGTGTCCTCTCTCCTCTCTTCCTCCTGTAAGTGCCCTTCTAATAAAACTTCATTGAAAAGC EMBV3_14840 GCAAAGCCGGATTTACACTAAGGAAGTGACGGTGCAGATTCTGGGTTTTGACATACATGC Gene BVT0102_088158 - 1 EMBV3_09382 GK000022.2:43979583-44018731 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03308 AAATCTCTCCAAACCCTGACCTCACCCCCAACCTCAGCAACCATGACCTGAAACCTCAGT Gene GeneID:505940|ARHGEF2:XM_002685973:286_cdna Constitutive 0 NULL GeneID:505940 3 GENE ARHGEF2 MGC152523 rho/rac guanine nucleotide exchange factor (GEF) 2 EMBV3_39387 GAATGATTCCTACAGCGGTCTTAGCTTGGGAGGCATTCCGGAAGGTTACTCTGATTCACC Gene BVV0102_252796 + 0 NULL GK000012.2:7511401-9042238 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00219592 TCONS_00118487 TCONS_00250203 TCONS_00196822 TCONS_00123823 TCONS_00210913 TCONS_00174805 TCONS_00118458 TCONS_00174808 TCONS_00174809 TCONS_00171428 TCONS_00218430 TCONS_00174806 TCONS_00174807 10 XLOC_132911 XLOC_072644 XLOC_153146 XLOC_118487 XLOC_075375 XLOC_129423 XLOC_104695 XLOC_072622 XLOC_103815 XLOC_131750 Coding TCONS_00123823 XLOC_075375 NonCoding NonCoding - 21:34656367-34662647 - TSS92582 6280 3 TCONS_00123823_4 92 0.992675159235669 1 0 3.77134517527418e-05 4.21711484909763e-05 6.36514048010475e-05 3.23976139061837e-05 6.15331922129947e-05 3.61700959405924e-05 1.61526940260824e-05 6.0735715796653e-05 3.88954490514635e-05 0.00595356662766109 0.00300315911924533 0.00173409760772519 0.000118225667385741 0.000425361799399912 0.000169227460384902 0.0482497752055065 0.0251893156191683 0.0387135172272996 1.57274342601737e-05 1.68872656173388e-05 1.65937901894413e-05 0.0286143890436025 0.0366562465344312 0.0402979952275959 2.89694279046929e-05 2.21167479186835e-05 1.12648953241591e-05 0.0178434173707148 0.010300482077611 0.0272490970592757 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1490 91.55 0.167197452229299 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 3e-30 140 64.52 0.133917197452229 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 TTGTTGTTGAATCACACGAATACACCAGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCATTCCCCCCTTTTCTTTTAGGAGAATTATGTTGCCTAGGGAAAAGGGGCGTCGTTCTCATTCCATAACTACTTCTGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGCAGGGAGCAAACAGTAAAAACAAAACAACCAGAATTAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTACAAAGTGTTTGCACCAGTCCATTCTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCATGGGAAGCCTTTCACTGACGAAGAGGGGAGTGCTCCGCAGACCCAGCAGTTAGACCGATTGTGGAATGCAGCATAAGAGTGAGCCCAGGACAGGAGGACATTGTCTTGAGGATCCAACGGCAGACTCAGGATATTTGGAGTCAGCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTCCAAAACCTGTTCAGCAGTCACCACGGCATAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGGCTAATGAGGTATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCGTTTTTCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAAGATTTCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCGCTGCCCCAATTACTCGTAGGCAGTGGGGCCACCCACATGCAACTACATCTAATTCTCTGCTTAGATAAGCAATAGGTTGTTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGGAGAGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTCGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCCCCATAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCCTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTCTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGTCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCTTCTGTCTCAGCACAGAGCAAAATATCTACATATTGTAACACCACTGCTTCAGAGCTGTTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCGAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATCCTTTAAATCAATTACTGAGAAATATTTGGCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTGCCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGTTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCCTTAACTTCATGTTTCAGTGGATAGTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGCTCGACCCACAGATTTTCCATCAGCCCATACTCTAGGATTTACATTTTGTTCAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTCATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAGGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATACCTTTTGGCTCGTCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGATGGATTGGCCCCCCACAACTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCTGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACACCTCTGGGGGCAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACCGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCCCGCTTGAGGTGCCCCTCCTTTCCACAGCAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCTGAGCATTTTTCTCAGGCTATTTAAGAACGTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCCTTTGTCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAATAGACTGTCTGAGCCAGTTGTAACAGAGTGTCTAAAGACTGATTTGGTCCATACGCCTGCTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCGGGATCAATCTCAGTGAATCTGCGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCTTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCTGCCTAAGTCCTTCAAGAATACATCTAACAAAATGACTCTGATCCCATCTTCCTTTAGCTGTGTTGTAGTCCCAGTCTGGTTCTATAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCATTCTCCCTCTTCCCTACTGATTCATTACCAAGCCATTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGATCATAAAGCAAAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGATTGGAGAAACCTGTTTTTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCCCAGTTTGGAGTCCCTGGTACGGGGGCAAAGGAAGAGGACAGGAGGGAGCTGAAGGTTTCACACCCAAATCTATACCCTTAGGACGTAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGTAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATCTGTAAGAGAGGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCGCCGTACTCGTCCCTCCAGGTTCTACCACCGGGATGGGGTGGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTTCCGGAATGCCTCCCAAGCTAAGACCGCTGTAGGAAACATTCGTCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGACCACAATAAGACCGACGCAAACATAAAACTGAGATGTTCTTTCCAAGCATCACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCTGGCATTACCAAAGAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTCCGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACGAATCCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTCCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATATCTGGTCGGTTCCCGAAGGAGACATTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAATGCCCCGACAGGTTTCTGCCATAAGCTGTATGAGATCACCATGGAACCGCAGAGCAGGGCCCCTTACTTGCTTCATGCAGGGCATGCCATTCATTCACACAAGCACACGGTAGAGTTAGTAAAGCATGGCAGAAAACGTGTTCGCTAAGAGAACAAAGAACTAAAGCTCCAAGCTTCCTTACCTTGTCCTGAAGGATCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACACGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACAAGGCTTGATCGCTCGGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGTAGAAAGAGCACCCGCTTGCTAGTGTTGACAATGAAGTTATATACTCTCTAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAAAGACTGTCCTTAATCCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 4739 TCONS_00119284 TCONS_00119285 TCONS_00119286 TCONS_00119289 TCONS_00119290 TCONS_00119291 TCONS_00119292 TCONS_00119293 . 3' 11018 EMBV3_10261 CCCACCAGCTCGTCCAATCTCTATGGGAACTCCATGTACTTTGTGAACCCTGGCTTGGCA Gene GeneID:282181|CHRNB4:NM_174517:19_cdna Constitutive 0 NULL GeneID:282181 21 GENE CHRNB4 NULL cholinergic receptor, nicotinic, beta 4 EMBV3_05154 CCTATGGCAGGTGATGCTCATTTGGCTCCTCCCCACCTCTTTATTGAGAAAACCCTCTTC Gene BVV0102_268865 - 1 EMBV3_02663 GK000004.2:114584303-114587368 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182926 1 XLOC_111027 NonCoding TCONS_00182926 XLOC_111027 NonCoding NonCoding - 4:114585963-114586606 - TSS136628 521 1 TCONS_00182926_1 74 2 0.191588785046729 0 0.000694326000534171 0 0 2.84290013099165e-05 0.000460005518745211 0 0 6.05768469368368e-05 0 0 0 0 0 0.000357841788606671 0 0 0.00062606854011756 0.000192692949582041 0 0 0 0 0 0 5.40918295364561e-05 0 1.84360666922996e-05 0 0 NM_007189.2 GCN20 Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 2 8e-18 95.1 69.33 0.44721689059501 0 noncoding 0 0 0 0 0.0130915548859043 0.929517364852593 -0.0249421190087327 0.685973521729257 CTGTGAGAAGAGGGTTTTCTCAATAAAGAGGTGGGGAGGAGCCAAATGAGCATCACCTGCCATAGGCGCCTGAGCACCCTCCACCGCACCAAGCCCACACGCCCCCAGTTCCCACCATTCAGCTGCAGCTGCGTGCCGGGGGTTGGAGGAGCAGGAGGGCGACTCTGGATCCAAGATAAGGCCTGGAGACCCCTTCCCCCTGTCCTGGAGATCCCAACAGACTTCAGTGGGAGTTCTTCACACAACCAGGCCCTCCCTTGGCCAAAGTAGCAGCTCGTCTCTGTTCTCATTATCCTCCTAACCAAGCCTCTGGACACTCAGGACAGACTGACGAGCCATTTTTCTCCGGGTTCCTGCCGTGAGGCACAAAGCAACCAGGCCAGGCCCCTGGGGGTCAGAGGGTGGAGTCCCTCACTCCAGCCTTGGGATCCAGGGCTCAGCTGCAGGCACTCACCTGATACCCTATTCCCTCTGCCCAGGGCAGCTCTGGGACTCCACAGCCATCTGAGAAGACCCTACTC TCONS_00185404 TCONS_00185405 TCONS_00185406 TCONS_00185407 r 3' 362 TCONS_00185404 TCONS_00185405 TCONS_00185406 TCONS_00185407 r 3' 1004 EMBV3_15590 CCCCAGCTCCTGGCTCCTGGCGCAGAGCGGGGCTCCAACCCTGGAACGAGCCATCTATTA Gene GeneID:100335264|LOC100335264:XM_002690412:89_cdna Constitutive 0 NULL GeneID:100335264 10 GENE LOC100335264 NULL hypothetical protein LOC100335264 EMBV3_04196 GTGGACGTTCACCCGGAGGGGCAGACCGCGGCGGGCAGGAAGACCTATGCCATGGTGTCC Variant GeneID:282104|TUFT1:NM_174479:22_cdna 113^187 1 EMBV3_30268 GeneID:282104 3 GENE TUFT1 NULL tuftelin 1 EMBV3_26693 AGAAATTGTGGGGACCACCTCTCTGTCATCAGCGCTCGGCGTGGTATACTTCTTGCATGC Gene GeneID:538469|SLC16A12:XM_002698344:51_cdna Constitutive 0 NULL GeneID:538469 26 GENE SLC16A12 NULL solute carrier family 16, member 12 (monocarboxylic acid transporter 12) EMBV3_41320 GGGGATGGCTACAGTGACTGATGGTTTGACAGCCCCAACATCCTTTGTTTACTGATATAA Gene BVV0102_217175 + 0 NULL GK000006.2:73770021-73838853 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15034 CAACCCCCGTCTTAGTGCGACGTGGACCCCGACTGGAGTTGAGCTCTTTCCCCAAATAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22428 GGGACAGAGGCCAAACATGGCATGTACTTGGACTTTGAAAGAAGTGATGTCCTACCAACC Gene GeneID:511775|NSUN6:NM_001083670:94_cdna UTR3_Alt 2 NULL GeneID:511775 13 GENE NSUN6 MGC137499 NOP2/Sun domain family, member 6 EMBV3_16730 TACATTGCCTACAGTGATGTAAGTGTCTACGGTCTGTGATGCTGCTGCCCCTAAAGTGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_14717 CCACTTGGCCTTTGAAGAAGAGTTTGGAAGAGTCAAGGGTCACTTCGGACCTATCAACAG Gene GeneID:521747|EIF3I:NM_001015628:121_cdna Constitutive 1 NULL GeneID:521747 2 GENE EIF3I EIF3S2 eukaryotic translation initiation factor 3, subunit I EMBV3_12419 GCGCTAGCCCCCTCTATGCCAGCTACAAGGCCGATAGCTTCTCGGAGGGTGATGACCTCT Gene GeneID:527886|BEGAIN:XM_002696838:659_cdna Constitutive 0 NULL GeneID:527886 21 GENE BEGAIN NULL brain-enriched guanylate kinase-associated homolog (rat) EMBV3_09901 TGAATTGCTCATCATCGGCTGGTACATTTTCCGCGTGCTGCTGCAGGTGTTCAGGTACTC Gene GeneID:353114|NNAT:NM_178323:788_cdna Constitutive 0 NULL GeneID:353114 13 GENE NNAT MGC128097 neuronatin EMBV3_24157 CACCACTGCTGCCCTGCTCTCAGCTTGCAAGAGAAGCTGGAGATTCAGTTACTCCACCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39955 AGCATTTTCCACATTAGCTCCACTGAGGGAAGGTCCAAGGCTTTCAGTACTTGCAGTTCC Gene GeneID:513914|LOC513914:XM_002699210:112_cdna Constitutive 0 NULL GeneID:513914 29 GENE LOC513914 NULL similar to olfactory receptor 877 EMBV3_35864 CCTATGTGACTGCCATGGACCTTTTCGAGAGTGTGTGCTTCTTATTTGTCTTTGCTGCTC Gene GeneID:613670|GABRG3:XM_002696516:118_cdna Constitutive 0 NULL GeneID:613670 21 GENE GABRG3 NULL gamma-aminobutyric acid (GABA) A receptor, gamma 3 EMBV3_41379 CTCTGGATGATGGTCAATACAACCCCACAGTTGTGAAGCCGCAGCGAACTGGGTTCCTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12663 CTGTGTTCCGTGCTGCTCAGTATAGTTCAGGGGGCCCCTGCCAGCTGGTGGAACCACTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19510 GCAAACCCTGTTGGTTTTCTGCCTTCACAATACATCCTACCTTGCCACCTTAGTCAACCG Gene BVV0102_335449 + 1 EMBV3_35385 GK000028.2:3274838-3323729 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30729 TGGATGTGCTCCCTGAGAAATGCATTGAATAGGCAGTTAGAGTTGGCTCTGCCCCCAGAA Gene GeneID:616660|TSPAN11:NM_001080325:52_cdna Constitutive 0 NULL GeneID:616660 5 GENE TSPAN11 MGC143294 tetraspanin 11 EMBV3_04774 GTTCGATCCCTGGTCAGAGAACTAGATCCCACGTGTCGCAACTAAGACCCAGCACAGTCA Gene BVT0102_042799 + 1 EMBV3_00837 GK000001.2:136528515-136573248 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37087 TCAAGGTATCTATCTGTTCCCTCTTTAATATATAAGGCTTTCTCAACATTGTATTTAATG Gene GeneID:317657|MYL1:NM_001079578:20_cdna Constitutive 2 NULL GeneID:317657 2 GENE MYL1 MGC155238 myosin, light chain 1, alkali; skeletal, fast EMBV3_08387 ACGACACAGAGAAAGACGACACAGAGAGAAAGAGGAAACCAGACACAAGTCCTCTCGAAG Gene GeneID:100336519|LOC100336519:XM_002688275:32_cdna UTR3_Alt 2 NULL GeneID:100336519 6 GENE LOC100336519 NULL FIP1L1 protein-like EMBV3_29054 CCATATGGGTTTTAATGATAACGGTGTATGACTGCTTTGCATTTGAGTCCTTATGCATTC Gene GeneID:504409|RBM26:XM_002691902:13_cdna Constitutive 0 NULL GeneID:504409 12 GENE RBM26 NULL RNA binding motif protein 26 EMBV3_41673 GTCGACTGCAACAAGAACATCTACACCCTCGTCAACAAGTTCAGTCTCGGGGTTGAGGAA Gene GeneID:524499|LOC524499:XM_002700290:18_cdna Constitutive 0 NULL GeneID:524499 X GENE LOC524499 NULL similar to melanoma antigen family B, 18 EMBV3_00770 GTTTTCTGTATGACTTATCTGCTGTGGTAATGCACCACGGGAAAGGATTTGGCTCAGGAC Gene GeneID:517022|USP44:XM_002687209:73_cdna Constitutive 0 NULL GeneID:517022 5 GENE USP44 USP49 ubiquitin specific peptidase 44 EMBV3_20613 TTTCCCATCTCCATCGGCATCATCGTGTTCAGCTACACGTCGCAGATTTTCCTGCCTTCG Gene GeneID:100301361|LOC100301361:XM_002692459:500_cdna Constitutive 0 NULL GeneID:100301361 13 GENE LOC100301361 NULL similar to vesicular inhibitory amino acid transporter EMBV3_33431 CAAGAAATGTGCCCGGCGTTTCACTGACTACTGTGACCTGAACAAGGACAAGGTCATCTC Gene GeneID:508379|SMOC1:NM_001079771:70_cdna Constitutive 0 NULL GeneID:508379 10 GENE SMOC1 NULL SPARC related modular calcium binding 1 EMBV3_38440 CTGCCCGAGTCTCTGTGTCTCAGCCCCGTTCGCAGGACACGTCCAGGATGGTAACTGCTT Gene BVV0102_319251 + 0 NULL GK000009.2:103381925-103460840 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04057 GAGATCCGACAATGTGGTAGAAGGCAGCTGTGCTGAAGAACTACTACAAAACTCCCACCG Gene GeneID:615845|GATC:NM_001046562:270_cdna Constitutive 0 NULL GeneID:615845 17 GENE GATC MGC137090 glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial) EMBV3_09240 CTATCCCTAAAGCAAGTCTTCTGAGGCTTATTTGAATAAGATAAATGCATGGGTGGGAGG Gene BVT0102_389545 + 1 EMBV3_11207 GK000011.2:16134218-16157513 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18163 ACCAACAATTTCCCGTATCTGGAAAAGACAGCCAAAGTGAGAATTCCAGAAGGCAGCATT Variant GeneID:540602|NANS:NM_001046482:38_cdna 519^968 3 EMBV3_15894 GeneID:540602 8 GENE NANS MGC137759 N-acetylneuraminic acid synthase EMBV3_02842 TGCAACGTGGGCCCTGCGCTCATCTTTCCAAATGCCTCCACCATGAATGTGGGCTTCCTC Gene GeneID:524063|LOC524063:XM_002697976:721_cdna Constitutive 0 NULL GeneID:524063 25 GENE LOC524063 NULL similar to Neuronal pentraxin-2 precursor (NP2) (Neuronal pentraxin II) (NP-II) EMBV3_13218 TACTACTGCTTCATCACGCTCACCACCATTGGCTTCGGCGACTACGTGGCATTGCAGAAG Gene GeneID:519188|KCNK3:XM_002691458:303_cdna Constitutive 0 NULL GeneID:519188 11 GENE KCNK3 NULL potassium channel, subfamily K, member 3 EMBV3_10185 TAGTGGAGATCTTCCTGACGCTCCAGTTCGTGCTCTGCATCTTTGCCACATACGACGAGA Gene GeneID:280859|MIP:NM_173937:887_cdna Constitutive 0 NULL GeneID:280859 5 GENE MIP AQP0 MP22 MP26 major intrinsic protein of lens fiber EMBV3_35940 CCTCTGGCAGGATGAGGCGTGCAGGCCTGGCTTTCCATTGAAATAGGGCATGAAGTTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03478 CTGCCCAAGAAATCAGCCCTTAAACCCTGGAAAATGTGCCTGTGAATGTACAGAAAATCC Gene GeneID:282122|VEGFC:NM_174488:2_cdna Constitutive 0 NULL GeneID:282122 27 GENE VEGFC NULL vascular endothelial growth factor C EMBV3_31864 GTTATCTGAATCTCTCTCATATGCATTATAAAACATAATCTGCTTTAACACACTCACAGG Gene GeneID:518308|PRUNE2:NM_001105382:32_cdna Constitutive 2 NULL GeneID:518308 8 GENE PRUNE2 MGC166262 prune homolog 2 (Drosophila) EMBV3_03623 AGCACTGAATGCTTGCACAGGGTAAAGGGTTGGGAGATACATCTTGGCTGGCACCAAACA Gene BVT0102_022509 + 0 NULL GK000012.2:66227333-66292145 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00040659 1 XLOC_024475 NonCoding TCONS_00040659 XLOC_024475 NonCoding NonCoding - 12:66233268-66235606 - TSS30160 2338 4 TCONS_00040659_1 60 0.352865697177074 1 0 0 0 0 0 0 0 0 0 0 8.79920932381762e-05 9.79122316293675e-07 0 0 0 0 0.00157023463888621 7.1010689185856e-06 7.51223091457508e-05 0 0 0 0.000168218700193627 8.63256069836771e-05 6.45344021645296e-05 0 0 0 0 2.07639447587573e-06 5.65736989276344e-05 XM_005216152.1 TRIM21 PREDICTED: Bos taurus tripartite motif containing 21 (TRIM21), 3e-62 244 85.58 0.0911035072711719 0 noncoding 0 0 0 0 0.170170674098169 0.182044405886987 0.0269358021933484 0.601503654515984 GTCAGTTCATCTCAATGTGTAAGCTCCAGTTGGAAGACTGCTGTTTTAAGTCACCATGTGGTACTTGGCTACTTGGTTGAGAAGTTTAAAGAACTACTTAAGGAGTTTTCTTGTGTAACGTTTTAAGAGGGAAACTTTGGTGATTGAAGTACCAACTTTTCCCCCATTAGCCTAGGCAAGTTACTGTCTCTTGCTCAGCGCTTTAGCTATGCTGGTTCTCTTCTAGCCAAAAACAAGCCTCCATGCACCGTGCCTTCAAAATAAGGAGTTTCAGCTTCACTCAGGTTGGGCACATGTTAAGTCTCAACCCAGCTGAACTAACCTGAGGACTCAAGAGTCTGTTCAGGCTTGAGTCTGTACACAATCTCTTGCCAGTGGCTGAGTAGGCTACCCTTTGCAGAAGCACTGAATGCTTGCACAGGGTAAAGGGTTGGGAGATACATCTTGGCTGGCACCAAACAATTTGATTTCAGTAAGGAGAGGGGTGGGCAGATGGAATGCAGGATTTTCAGGTACAACTACTCAACTCAGGTCTTCATCTCTGCCATTCGTATCATGCACAGGACAGATGTGTTATGTTGCTGTTCTGTAGGTCAGGAGTCTTGACAGATCTCACGGGTTGGGGTTCAAGTGTTGCAAAGCAGTGTTTCTGGAGGCTTTAAGGGGCACTCTGCGTCCTCTGCTTCTGGAGACTTCAGCATTCCCCAGCTCATTACCTCTTTCTCCATCTATGGATCCAAGGACAGTGAGTGGAGTCTGCACATGTCATTACTCTGACTTCCTGTCTCCCTTTTCCACTTTTAAGGGTCCTTGTGATGATGACACAGCTCACCTAGATACTTCTAAATAATCTTACTTAAGGTCAGTTTGATTCCCTCTGCCATCTAACTCCCCTTTACTGTGTAAACTGTTGGGGGTTCCAGGGATTAGGATGCAGATACTCTGGAGATGGGGAGCATTATTCTGTCTCCCCTCTTCTCACAGAACTGTGTCAGGCTCAGACATTGTGAGAGGCCCAGGGATGCCTTCATAAACTTAAAACTTTTTCAGAAAATAATTACAGGAAATAATTTTTTATAAACATTTAGTTAGAAAAAAATGAACTCAAGACTATCTTAAAGATTCTTCTCTGCACTATTTAGATGCCAGCTTACAGAGGTTGAAAAAGAAAATGGTTACTCACTGATTCAGTAAGGACCCACTTGTCATTCTTGTCTGAGTAAGACAGCAAGGGCTGGTAGTACACTTTAACTCATTTTAGAAAAAGTACAGAACCACATCAGTCAGTCAACAAGTTAAAGACCTCCAGAACGGGGAAGCCATTGAATAAATATTTGCCATGTTAGCTAATAAAATGTGAACAATAAGGAACTGCATTAAGAAGTGAAGATAGAGACTGAGCGTCTAAAACCTCAAAAACTGGGAAGTTAGCCTTTGGTGATGCATAGAAAATAAATGGGCTTCCTAGGTGGTGCTCTTGATAACCCACTTGACAATGCAGAAAACTTGAGATTTGGGTTTGATTCCTGGGTCAGGAGATTCCCCTGGAGGAGAGCATGGAAATGTACACCAGTATTTTTACCTGGAGGATCCCATGGACTGTGGAGCCTGACAGGCTGTGGTCCATAGGGGTGCAAAGAGTCAGACACGGCTGAAGTGACTTAGCATGCAACAACCAGAAAGTAAATATACAGTCTGACTTGCTTTGTTACTTAGGATACAGAGATGGTTTAAATGTTATTTTTATTTCAAAGCAACCACTAGCAGAATAAAACATTACCTGGTGGTTCAGACGGTAAAGTGGCTGCCTGCAGTGCAGGAGACCCGGGTTCAGTCCCTAGGTTGGGAAGATCTCCTGGAGAAGGAAATGGCAACCCACTCCAGTCCTCTTTCCTAGAAAATTCCATGGATGGAGGAGCGTGGTGGGCTACAGCCATGGGGTTGCAAAGAGTTGGACACGATTGATCGACTTCACTTTCACTTTACTAGAAAGAGCTGAGAAAACACAAAGCAAAAGACAAAAGTAAGAATTATGGAAGTTTAACACAAAATAATTTTAAGTATTATGTGTTTTAATTCTTAGTTTTATAATCGGCAAGCATTGGTAATTTTTTGTAGCCATGGTCAATACAGGCCAGTGATAGTTTGGCCAGACTTTAGTCCTAGTGCCTACCTTGGTGCTGTCGGCCCAGCAGTGAAACACATGATTGCCCCAGGTCCTTGAAAACAACAAACAGGTCTTGGTTTACTGTATTCCTTCAAATGACTGCAAAATAAGCATTCAATAAATATCTGGTGAGTGAGTTGGAGATCACTCACATCCCAAATACAATTTTAC TCONS_00035512 . 3' 5937 TCONS_00035512 . 3' 8274 EMBV3_25291 ATGGGGAATAGCCGCTCAGGTGGCCTGGCAGGGGCCGTGCGGGGCCAGCGGCCCTCGGCA Gene GeneID:100297304|LOC100297304:XM_002695654:110_cdna Constitutive 0 NULL GeneID:100297304 19 GENE LOC100297304 NULL hypothetical protein LOC100297304 EMBV3_18585 TCCCTCCCTTCACCTTAGTATCCCTTCCTTCACCTGGGTCTTCATCTGAGCAAAGACATC Gene BVT0102_394311 + 1 EMBV3_41994 GK000014.2:83783775-83892852 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00054085 1 XLOC_031898 NonCoding TCONS_00054085 XLOC_031898 NonCoding NonCoding - 14:83819359-83825488 - TSS39765 5600 2 TCONS_00054085_5 100 0.146607142857143 2 0.0864882506527415 0.000119049765077366 7.00910482907731e-05 0.000183021259527415 6.9695459033372e-05 0.000118139700160252 7.65543038770024e-05 0.000168702541946956 0.000115261458665812 0.000100035721689591 3.71039203273926e-05 0 1.27703065319473e-06 2.56185897810205e-06 1.00800192197584e-05 1.2265517590207e-05 0 0 0 0.000443061055611707 0.00102349823390277 1.084186142054e-05 0 0 7.48422266765009e-06 0.000442926559629263 0.000196446333973611 9.64069037503359e-05 0 1.73378981909294e-06 5.36808056913652e-06 NM_001098464.1 C16H1orf116 Bos taurus chromosome 16 open reading frame, human C1orf116 (C16H1orf116), mRNA. 3e-41 176 79.50 0.0348214285714286 NM_022783.3 DEPTOR Homo sapiens DEP domain containing MTOR-interacting protein (DEPTOR), transcript variant 1, mRNA. 1e-161 576 73.26 0.177142857142857 0 noncoding 0 0 0 0 0.0264274356248042 0.896814961901195 0.0291312688332423 0.681824011230892 GAAAAAACCTTTTTAATGCACTTTTTTTTCCAGGCAAAAGAGCTTCAGAAAACATCCGTCACTAAGCAGTTTTACAAATGGCACTTTTGGTTACATTAGATAATTGGATACCAGCCCCACGTGTCCTCTCTGACAGACTAGTTGTAGATCAGCTTTACAATGCAACTCTTTCTTAGGATAAAAAATGGTTAATTTTTTCTAAAGAAAGGAAAAGCTGAAACCCTAAAGGCATTGTTTTAAAAATGTAACATTTATTTCATGCTATACTGTCTATTGTTATATTATAATTTTAATTATTTTGCTATAACTTTTAAGAAACAGAGAAAATAAATTTCAACCTAATTTAAAAATAAACATATATATTAAGTACATATATTAATGCATTTTACAATACCATATAGTGACTTTGATTATAAACTTCCTTTTGGTGCACGGTAGATTTGTCCTCTTGGTATTGAACTGAGGAAAAACATATTATACCTGAAATTCTTCTTTGCATGAGTAAAACCATGGTCATGACACCAACAGACTCCAACCAATTTGCAAAACTGAAATCTTGGGTTATTCTGATCACGGATAATCAAAGTGAAACACGATTAGTATTCACCAGGAGAGAATACTTAACACTTTTCAAACAGATCTTGAAAGCAGAGTATTTTCATGACATATTTGAAAGGAATGAGTACTTGGGAGAGTGAGACTCTGTTTTGGATTGAAAGCAGTGGTTTTTAACTATCAATTATTGCCGCCCCGATGCATTCACCCTTCTTAGGGTAGTGTGAATTTGGTCGTGTCTAATCTACTCAAACATGGGTCTCTTCATGTTACCCACCATTTCTCAACCAGAAATTTATCAGTTTATATAATTATCTGACAGAGATTAATAAGAGAACATCAGATAGCAGAACCAACCCAAAGGGCGGCTGCATTTTCTCTCCAGAGCAGAATCATTCAACATGGCTTTCACACCAGTGCTGACAGCACATTCTGTGCGAATGGCTGGGCGTAACGTGGTCTCTGTCTCCATCACACACAGAGACACCCGGAAAGCCAGACGCGTCTTCTCTGGGAGCAAACCACATCATTTCAGAGACTCCACGAGTGACCTCAACTCTCACACGCAGTTCCCCAAAACGCAGACACACACATACGTAGGAAATGAAAGTTCTTCAAAATACTGCTTCCTCCTAATTCAGGGTAATTCTTGGTGTTCCGTTTAGGAATGGAGTTTCTAAATTTTAAAGCAGTTCAACTGTCAAAATGCCATACAAAATATTTACTTTTTAATATGCTACGATTTAACAACTCAAGACCTAAGTACGTATCCTTCACTTTCACGGGTACACGGCCCAACCGCGTGTCACGAACAAGCCAAAGCCAAACGCCCGTCGTCCCCGCCCCGCCCTGTGCCGCAGGGCCACACTGAGGATTCGGGCCGGCAGGGAGGGAGGCGCTGGGCCCAGGCCGGCCCAACAAGACCGCTCCACGCCTCAGCGAAAGGCAAAGGGCAAGACGCGCGCTCCCGCGGCTCCACGCAGCACTGTGGTTTTGGGATTTCCTGACTCGTTTTCACTGGGCGTGGGGCTCTGTTCACAACTGTTGCACTTCTACCCGGCGGGTGGTCAGTGATTGACATCTGGATTGCTGAAGTCTTGCAACAGCTAGGTAACTCCTTAGGCCTCCACTCAAAAAGTAGTATCTACTCTGGGTGGATTAAAACCAGCCAGGCTCTTGGCAGCTCCTCCATCACAAGGGGCAGCCTGCTTGCAGACCTCTTGGCTCTGGGCTAGCTTTGTGACTTGCACTGGCCAAGAAAAGGCTACGAAGGTGACCTTTTGCGACTTTGAGCAGGTCCACAGAAGGGCTTGCAGTCTCTCTTCTTCCTCTCTTTGATCTCATGAGACCTAACGAGGAAGCCTGGGTCAGCTATGGGGAGAGACCCCGTGAGTCCACTGGAGGAGTCTCAGCCATAGCCCCAGGCCACAGCCAGACGGAGTCACAGAGCCAGCCCCCATCAGCCAGTCCCGAGCATCAGCCTCTCTGAGCTCAGGTGCGCGTGTGAACTCAGCCAGAATATCAGGCTGTGCTCGTTCACCTTAGCACAGCTCTGCTCAAAGGCCAACCACAGGCTCCCTAGAGAATCAGTAGTGTCAGAAGCTATGCTCCAGGTTGATTGCTCGGACAGCAGTGGAGAGCGGACAGCCTGCTCTGTGTCAGGAAACGTGCTAGGCGAGGGCAGCGCCGGGGAGCAGGACACAGCCCCGTCCTGCAGACACTTAGAACTCCGGGAGACAGACAGGGGTGGGAGCATTTCTGAGGAGACGTCAGCAGTGCTGGGATCACACAGGCTGGTGTATAGGGGTCCCTGGGAATTCAGAGAAGGGCATCCATCCCAGAACCAGGCTGCTGGCAAAGATTTCTCAGAGGGAATATCTAAGACAATGCCTAAGGGGAGTTCATAAGACAGACTGTTCCAGGCAGAGACGGAGAAAGAATAATATTCCAGGGAGGAAAAACTGCATGTGCAAAAGCTGGAGAGAGCTCAACCTGGCCGTCTGGGTGAGGAGCATTCACAGGGTGAGGATGCAGCCTGGGCTGGGACCACAGTTCAGAGGACGCTCTCCTGAAGCAGAACTCTCTGCTTTTGGGCTTTAAGCCAGGGTGGTGGGAGCCAAAAGCTTCCCTCCCTTCACCTTAGTATCCCTTCCTTCACCTGGGTCTTCATCTGAGCAAAGACATCAACGCCACCCTCTGAATCAAGGAAAACCCTTCTTTGCTACTTAGACTGGCTGAAGGGACGCGGAGTTGTGCCAACCCCCGAATAGTCATCAGGTCGGGAGCGAAGGAGCAGCAGCCGGCGAGAGGATGCCGTTCCCGGAGGCCCGCCTCCTCCTGTGTCAGACGCGAACACCCAGGCCCAGAGGGCTTTTAGGAGACCTTTAAAGGGAGCCTGATGGGTAACACCTCCTACATACTGTTAACAGCCTCGGGCCTTGATGAGCCGGTTTCCTCTGCTGTAACATGGAGATGAGGCCGCCGCTGACCGCCCAGATCAGCAGGAGAGACTGAGCGCAGCACGGGGGCAGAAGAAGGCGCCACAGACAGTCTCCAGCTGGGGAAGGGCTGTGGGTGGGGGACAGGGCGTCCGCACTAGACGGGCCGTGTCTGAATCCAGGCTCTGTCACCCAGGAGTTCCCGCCACTGTGGGGACTTAGAGACCACTTCTAAACGTGCTCAGATTGAGCTTCCAAGTCCGAAACACGAGGGCGATGCTAACTGCCTCTCAGGTCGTGATGAGGATGAAGAGCGACCACAGCGCCTGGCACGTGGTGTAAACGCAGGGCACACAGAGACACCAGGACTTCCCAAGGCAGGCTGACAGGACTCAAGTTAGCATCCTGCATTATTTCAAAACCCTGCTCTCGGCCTAAGGCTACAGACGAGAAAAGCCGGGATACCAGAAACACAGACGTCTGACGTCTTCAGCATGGCGTGTCCACCCCACCCGTACCACCATATTATAACCCATCACTAAAAAAAGGCCGAGGCACAACATTCATATTTTGTTACTACATGGTAAGAAAGTAGCCTTGTCATTCAGAACGCGTTATATGAAAATAAAAGCAATTGAGCATTCCCTGACTCCCTAATTTGGCACTCTGAGAAACTTCCTCTACACACCAAGCTCCAAAATGCATTCTCTTTGAGACAAAAAAAAAAAAAAAAGACACATGCATATATGTACAAGTGGGCTCAAAAGTTACAACACAAGAAGCTGCTTTTGGTGAAAAATAATCCCACCAAATAAGCAGCATGTCATGTTCTTAGAATGTGTCCCTAGAAAGCTAGTGAAAATTCAGGCCACTAAGGCAATTTAGTTTCAAGTTTTATCACATAAGGGCCAAGTTCTAGAATACTTCACAAGGGACAGCTTCAGAGTGAAATCTTGACAGAGGCATGATTTTGAATTGTATATGTACATACTAACTTGTCTGTTTTGACATTCAACATATTCAGAATTATTTCTAGAAAGCTGCTGTTGCTGATTGACAGAATGATCCAGGCTCAGAAAGAGAAAACAGAGCCCACATAGTTTAAGTAATTCTCTCTCTCTCTGCCCCACCCACGTCATCACAAAGTGTTTGCTTTTGACCACTGCCGTAATTGAAAACACACATTAAGTTAGAAGTTGATACTAAAGGCAGGAATTAAGAAAAAGTCAAAAAACGCCTTAGAACCTTCAAAACGCCCGTTAACAAGCACTATTCCTTTGGATGTTGCTTCAGTTTGAAATTCAGTGAACTCGAGATCCTCTGATAAACAGATCCATGCTCGTTTTGGTGAGAGTACAACTGTAAAGTCTAGAAAAACTACTGTATTGATTCCCACGAAGGCAAATTTAGCACGGTGCTGTTTCGGCGAGAGAAGCATCTCAACTTATTGTGAAGCAAGACCAAAAACAATGGACGAGAACCACAAACGGAAGTTGAGTAAGGCAACGCAACTACGTAGGGGAAAAAATTCTGTGTCCCAAACTTTTTCTGCACCGACAGACGTTGTCTTTTTCACTTTTTTCTTTTTTAAAGACACACTCCCTGGTTCTCCCACATTCAACAGGGAAGCAGTGCAGGAAACTCGGATGAGACGCGTACGTGCGCAGTGAAGGCCCGCGGGCCCGCCGCGCGCAGTGAAGGCCCGCGGGTCCGCCGTGCGCAGTGAAGGCCCGCGGGCCCGACGCCGCCGCCGCCCCGCTCAGCACTCCAGCTCCTCCATGACCTCCATCACGATGGTCCGCGGCCCGGTCAGAATCAGGTTGCTCACCGTCCGGTAGTCGACGTGCAGCACGTTAAGCCCGTTCACAGAGACGACGAGCTGACAGACCTGGAGGGCAGAGAGAAAGCACCTCTTGAATCCCGCGGCGGCCCAGGCGAGGGCGCGGCGCTTCCGTTACCGCGACGCGGACGGACCGGAGACTGTCACACGGGGCCAAGCAAGTCAGATGGGAGAGGCAAACGGATGCGGTGTCGCCCACGTGCGGGGCCTAAAAAAGGCGCACAAGAGCTTACCTCCAAAGCAGCAGCGGGGTCACAGCACATGGGATCTTAGCTCCCCAACCAGGGATCGAAACCAGAGCCCTTTGCGTGAGAACACGGAGTCTTAACCACCGGACCGTCAGGGACACCTGAGATTGAGGAATAAAAGAATTTGTTACCGTGGGTGTTAACCTCAGGCTCGAACCCCCCCTTCCTGAGGGAATACAAGCTGCAGCTGCTGAGAGGCGTTATCCTGTCTAATGCAAAAGTCTAATCATGTCTAACTTTCACCAGAACTTGTTAAGCTGAAGCTGAAAGTCGCTCAGTCATTTCCAACTCTTCTCGACCCCGTGGACTGCAGCCCGCCAGGCTCCTCTGCCCATGGGAGTCTCCAGGCAAGAACACTGGAGTGGGCTGCCGTGCCCTCCTCCAGGGGGTCTTCCTGACCTGGGGACTGAACTCGTACCTCCTGCAGGTGGGCGCTTTACCACTAGGGCCACCTGGGAAGCCCATGAAGGTGCACACCTGCTCTCAATTACCATTATGCGTGTTGATGCCACAAAGAAC TCONS_00052433 TCONS_00052437 r 5' 9855 TCONS_00052433 TCONS_00052437 r 5' 4235 EMBV3_13649 ACAGAACCTGACCCTCCAGTGTCGCTCTGACATCGGCTACACCAGATTCGCTCTGTCCAA Gene GeneID:790181|LOC790181:XM_002683987:2_cdna Constitutive 0 NULL GeneID:790181 Un GENE LOC790181 NULL similar to immunoglobulin-like transcript 8; ILT8 EMBV3_20666 GTTTTACTCGCTGCTTCACTCATTTTCCTGACACTTAGACAGTACCAGGGGTAGGCCAGC Gene GeneID:522691|TTC22:NM_001098055:61_cdna Constitutive 0 NULL GeneID:522691 3 GENE TTC22 NULL tetratricopeptide repeat domain 22 EMBV3_12822 TGGGTGGAAAGAGCCTGTCCTCAAATGACCCAACAGGTCTACCCTCTAGCTTTGATTTGG Gene GeneID:522335|NEK10:XM_002707776:360_cdna Constitutive 0 NULL GeneID:522335 22 GENE NEK10 NULL NIMA (never in mitosis gene a)- related kinase 10 EMBV3_19974 GACAGCACCACATACTTGATCATTCCTCCCCTCTCAAGCCGATTCTAATATTGGCAACCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_02050 AAAGCTGAAAGGCTATTGGAACAAGGCAAATTAAAGCGCTATCATGCCTGTGGTGGTTGG Gene GeneID:100138186|SPATA1:XM_002686313:223_cdna Constitutive 0 NULL GeneID:100138186 3 GENE SPATA1 NULL spermatogenesis associated 1 EMBV3_42977 GGGTCTGTTCCGGACTTACGATGACTGTGTGACGTTCCAGCTGTTTAAGAGTTTCAGACG Gene GeneID:525636|RCAN2:NM_001015632:300_cdna Constitutive 0 NULL GeneID:525636 23 GENE RCAN2 DSCR1L1 regulator of calcineurin 2 EMBV3_19667 AACTGCGGCGCGACCAGAAAGAGGCTTTGCTGCGCTTCTGCGTCACATGGAACACCAACT Gene GeneID:618429|TBL3:NM_001046619:300_cdna Constitutive 0 NULL GeneID:618429 25 GENE TBL3 MGC127160 transducin (beta)-like 3 EMBV3_41126 TAAGTCATCTAGACTGAGGAAGGGGTTAGGACAGGCGTGTGGGTTGGGAACCGAAATCAT Gene GeneID:617566|BMP6:XM_002697620:139_cdna Constitutive 0 NULL GeneID:617566 23 GENE BMP6 NULL bone morphogenetic protein 6 EMBV3_28319 GATTTACCATGGTTGTTCTCACTTTATATAGCTGGTGGGGTCGTGGGAGGTTTCAGGCTG Gene BVV0102_090250 - 0 NULL GK000010.2:34280993-35314024 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35247 TGCGATGAGAAGCTGCTTACGTACACATTGCAGATCAAATATCTGGAGTTACGATGCCAG Gene GeneID:510164|USP10:NM_001098924:20_cdna Constitutive 0 NULL GeneID:510164 18 GENE USP10 MGC143261 ubiquitin specific peptidase 10 EMBV3_33080 CGACAAGAAGAGGAGGCCCCTCACCCTGGCCTCTGGACCTGTGTTCCTCTGTGGCCAGGA Variant GeneID:100316905|LOC100316905:XM_002689764:24_cdna 358^438 9 EMBV3_16327 GeneID:100316905 8 GENE LOC100316905 NULL nucleoplasmin 2 EMBV3_08285 CCAGAGTGAGGATGCCTCTCAGGTTGAACTCTTAACCCACAAGCCTTGCACGATAGGGAT Gene BVV0102_122354 + 0 NULL GK000017.2:73967311-74016489 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00081941 1 XLOC_050818 NonCoding TCONS_00081941 XLOC_050818 NonCoding NonCoding - 17:73997007-73998150 - TSS61881 1143 3 TCONS_00081941_4 65 1 0 0 0 0 0 4.79942920489826e-07 0 0 5.17473636743473e-06 0 0 2.00278680223118e-06 0 0 0.000172850583384498 0 2.31072608627738e-05 0 0 0 0 2.21327578381581e-07 5.19383017969676e-05 0.000850787545662796 2.93344533217822e-05 1.81849889182512e-05 0 0 0 0.000114675743067687 0 0 noncoding 0 0 0 0 -0.602494868860163 0.212158981589917 -0.0483781569173161 0.310443940318056 TTTTTCTGAAAGCTTTAAAAATATTTATGTAGTCAAATTCATCAACTAATTCTTTGTGTTCTCATATTGCTTCAGAGTTGGTGAAATACACAAAGCCCTGTAACACTTTAACTTAGTCTTTTAAGCTGTGTGGAGATCACTGTGGAGAAGGATGCTAGCTTTGTATGTCTTACGTATTTTATCCCGTATTAATAGTACAGGTTTTATCAGTATTTGTTGCTTTCCAGTTTGTCTAATTTCACGTGCGTTTTCATATTCAGTTTAGAGGTGTTTACCTGTGTCTTTCTGGAATCTACTTGTTTCATTGATCTACTTTATTATTTTTAACTATAACCTAGTATCGTAAGGCTTTTTACTCTTGTTATGCCCAGATATTTGCCTTTAACTTCTTTACAGGGCCCTCCTTGAATCCCTGTCCATTTTCCTGCTCTGGTGGAGTGGGTTGGCCAAGCTAAAACTTGCGTGTCATTAGGATGCCTTTTCTTCCCTTGTCCCCACTCTCAGGACTCAGAGCCTGTCTGGCTTCCTGCTCCAGGCTCTTGTGCCTGGCCTTGGTTCTGGTAGCTCTCCAGAGTGAGGATGCCTCTCAGGTTGAACTCTTAACCCACAAGCCTTGCACGATAGGGATGGACCCACACCCTTGGCAGTGAACCCCTGGACCACCAGCGAATTCCGTCCAGGTGAACTCTTTAAGTGTTAACAGCTGATAAGAGATCTGAAAAAATTAAAAAAAAAAAAAAAAAAAAGAGCCCATGCTTTTGAGATGGGATGGATACTTAGTTTCAGAGCGTTTTTATCACCTAAAAAGAAATCTTCACCTGCCAGTCACCCCCCTCTCCTGCAGTTGCCAGTCCCTGTGCGGAGCTGGGGGCGAGGTGCCCTTTTGCATTCTGGCTTCTCTTCACATGCATTTCACTATTTTACTGTAGTGTTGTCAGAATTTACTTTTCGGAGGCTTTAGTTACTATTTGGCATTGACTCCGTAAAACCAATCTGACAAATAGTTTTCTTTACTAATTTTTCGTGTTCCTCGTTGGACTCTGAGTAACCTCATCGACATTCCTGTGTACTGATGACCAGGTGGTGTTACTTTCTCATCTGTTTCTACATTCTTAGATCTTTGTTTTTTCCTTCTTGCTACTT TCONS_00076364 . 3' 13088 TCONS_00076364 . 3' 14230 EMBV3_34095 AGCTGTATCTCCACAACTTAGAACAGCGTCCAGCCCGAAGAAAGTGCTCAGTGACTCTGT Gene BVT0101_041332 - 0 NULL GK000030.2:4181618-4330906 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40298 CAAGTTTCTCTCGGGGATAACACCCTCATACTGGTCCCTGGAGCCCTCCTCGAATTCCTA Gene GeneID:616668|LOC616668:XM_002685069:191_cdna Constitutive 0 NULL GeneID:616668 1 GENE LOC616668 NULL hypothetical LOC616668 EMBV3_16412 CTGCCATCCATATACTGGGGACATGGACTGATTTGTGCGTCCCAGTCTCATCAGACAAAC Gene BVT0102_253391 - 0 NULL GK000008.2:37679539-37979902 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00224979 1 XLOC_137664 NonCoding TCONS_00224979 XLOC_137664 NonCoding NonCoding - 8:37871816-37889173 - TSS168566 1052 3 TCONS_00224979_1 41 0.262357414448669 3 0.939559806407006 0.00147076043488713 0.00105470335490297 0.000441469578717662 0.000114465805506676 0.000159363376360823 6.39637370688311e-06 6.44979422034869e-05 0.000185354912787824 0.000162889682471811 1.84906096772969e-05 4.47303544894454e-227 1.77247912515925e-58 4.77084696858747e-05 1.69243454977906e-252 5.8142465915873e-05 0 0 0 0.00106471171793312 0.00209952491368487 1.47574501923777e-05 0 1.2461453833254e-99 0 0.000166473396733147 0.000216713965735396 0.00063574646173413 0 9.31585257049074e-168 8.39934079267793e-220 NM_001272010.1 GPRC5C Bos taurus G protein-coupled receptor, family C, group 5, member C (GPRC5C), mRNA. 3e-52 210 77.39 0.253802281368821 NM_022036.2 GPRC5C Homo sapiens G protein-coupled receptor, family C, group 5, member C (GPRC5C), transcript variant 1, mRNA. 8e-34 149 75.00 0.245247148288973 0 noncoding 0 0 0 0 GCTGCCTACTCACTTCTCAGGGCTTGTGGAGTCCAGGAGGCAAGTCTGCTTCATGTTTGGGTCACCTCCTGCTGCCATGATCCAGCCAAATAGTGTTCTTCTTGAGGTGTCGGCCAGTCAGCACCTACATTCTCTGGAATCTTCTGAGAGATTCCTGCAACCCGAGAGATTTTTATAGGCACTTCTTTCCTGGTCTTGCTCCTCTGTCAGGAAAAAGGGTGCCTAATAAACACATTTCTGCTTTAAAAAAAAAAAAAAAAGAAGAAGAAGAACCTCTCCACAAGGTAGCTTATCAGAGAGGGCGGTGAGGGGCTGTGAAGGACGTGAAGGGCGTGAGGTGCGTGAGGGGCGTGCCCCCGGCTAGTTTCCCAGGTGAGCAATGAGCCAACCTGACGTCAATTCCCCCTATAACTGGTTGCGTCACACCCCCGCCCCAACCTTGTTACAAAGCCTGCTGCCACGTTCTGCCCGCTAATCTCCACTGCTCGTAGTAGAATGTCGCTCCAGGACCTTGCTTCAGACATGGAACCTCTATACTATTATCCATAATGACTCCACCAGATTGCATTCCCACCAATGGTATAGAAGGAGGCCCTTTTCTCCATACACTCTCCAGCATTTGTTACCTGTCAATTCCCCCATAACTGGTAATCTCACCACACAAGCACTACCTCCTTGAGAAACCTGCCACCACGTTCTGCTGGCCATCCTCTGCTCACAGTGGGATGTTGTTCTAGGACCTTGCTTCAGACAGGGAATTGCCCAGAGCTGGGGAGAAGACTGCTCAGCACAAAATATGACTCAGGAATGACCGGACAGAGCTTCAAGATCAAACATCCCATCCTGTTTGTCTGATGAGACTGGGACGCACAAATCAGTCCATGTCCCCAGTATATGGATGGCAGGAACTGATGAAAAACCCATGGTTGAAGATCTTCCTTTCTTTTTCCAAAGCTTAGTCAGCCATGCACCCCCAGGCACCTCTCCCTTCCCCAGCATTCAGTACTGGCTTTAAAATCTGACAATATAAGGAGATTTCATGTGGTCAAGAT TCONS_00227318 r 5' 0 TCONS_00227318 r 3' 2650 EMBV3_33689 GGAGAACTTTTGAGAGGCTGACATCAAACCATGTGGGAAAGTAAGGTGGAAATCGGGTGG Gene GeneID:280686|F3:NM_173878:105_cdna Constitutive 0 NULL GeneID:280686 3 GENE F3 NULL coagulation factor III (thromboplastin, tissue factor) EMBV3_07055 AAGAGGTGTTAAGTGAAGAAGAAAGAGCCCTGGCTCCGGCGTCTGTGTGGGCAGCTCCTC Variant GeneID:534015|TMCO7:XM_002694832:728_cdna 771^907 1 EMBV3_00991 GeneID:534015 18 GENE TMCO7 NULL transmembrane and coiled-coil domains 7 EMBV3_09021 GCAAAATAGCTTTCAGCTTCGGTGTCAACAATGCGAGGACCAGCAGAGGGAAGAAGCAAC Gene GeneID:529366|SLMAP:XM_002696995:372_cdna UTR3_Alt 2 NULL GeneID:529366 22 GENE SLMAP NULL sarcolemma associated protein EMBV3_22409 CTTTGACCGACTTTCCCCGAGAGCAAACTCCTAGAATTGAGCAAAAACGTTTCCACTGGG Gene GeneID:100337206|LOC100337206:XM_002697768:313_cdna Constitutive 0 NULL GeneID:100337206 24 GENE LOC100337206 NULL methyl-CpG binding domain protein 2-like EMBV3_27096 TGCCCATTTGGTAGAAGGATAAAGAAAGGATGGCGGTGGGAGAGCCTTGAGTGGCGAGAA Gene BVV0102_062316 + 0 NULL GK000029.2:33760893-34554779 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_03284 GCAGGGGGGCTCACAGCTGCCTGCATCCCGGCCTGCTGCTGCCCTGGCGCTGGCTGGCCG Variant GeneID:510658|SLC2A6:NM_001080256:55_cdna 484^583 1 EMBV3_15874 GeneID:510658 11 GENE SLC2A6 NULL solute carrier family 2 (facilitated glucose transporter), member 6 EMBV3_23574 CACACTTCCGATGAGGCCTTGAGCTTGCTTTCTGAAGGTTCCGGCGGCAGCACCATTGAA Gene GeneID:613505|GPR143:XM_002700459:23_cdna Constitutive 1 NULL GeneID:613505 X GENE GPR143 NULL G protein-coupled receptor 143 EMBV3_00722 GGCGGCGCTATCTACGGGGTCGCTTTCTGGGGAAAGCTCTCACGGAGCCCGAGGCCCGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43629 CCATTCTGGTTGTCATGATTCCCTGCTTGCTGATCCTATGTTCCTACACTCGCATCGCTG Gene GeneID:783518|LOC783518:XM_002693143:51_cdna Constitutive 0 NULL GeneID:783518 15 GENE LOC783518 NULL similar to Olfactory receptor 10A5 (HP3) (Olfactory receptor-like protein JCG6) (Olfactory receptor 11-403) (OR11-403) EMBV3_16158 CGAGACTACATTTGTATATGTGAGCCCGGGCACGGCCTATTATGGGATACCCATGCGTCT Gene GeneID:527730|TMPPE:NM_001099711:134_cdna Constitutive 0 NULL GeneID:527730 22 GENE TMPPE NULL transmembrane protein with metallophosphoesterase domain EMBV3_00244 CTGGGAATTCTAGGGCTGCCGGATCCTTTTATGTCCTATATACTTGACACTTTCTCCCTG Gene GeneID:506029|STRADB:XM_002685489:220_cdna Constitutive 0 NULL GeneID:506029 2 GENE STRADB NULL STE20-related kinase adaptor beta EMBV3_39719 AACCGGTGTGTGTGCTGGGCAGTGTGAAGAACTGCCTCCCAAAGCTGTAGCATCAAAAGT Gene GeneID:538123|GPR158:XM_002692095:296_cdna Constitutive 0 NULL GeneID:538123 13 GENE GPR158 NULL G protein-coupled receptor 158 EMBV3_17367 TTCCTTACTCCAACACTCTTCTCACAGGCTCTGCCGATAAGTCACTGTCCATCTGGGATG Gene GeneID:522957|SPAG16:XM_002685561:33_cdna Constitutive 0 NULL GeneID:522957 2 GENE SPAG16 NULL sperm associated antigen 16 EMBV3_28417 GCTGTGTCCTCAGTTGACTCATTCACTCAGGTATGAAAACTTTCAAAGACGACTAGCACA Variant GeneID:504867|C29H11orf73:NM_001034226:11_cdna 623^741 2 EMBV3_18559 GeneID:504867 29 GENE C29H11orf73 C11orf73 MGC128621 chromosome 11 open reading frame 73 ortholog EMBV3_32956 GAAGAGATTCAGCTTCTTCCCCAAAAAGAAATAGCCTCTCGGGGGCCTGGCGAGTGAAGC Gene GeneID:527711|LOC527711:XR_084561:404_cdna Constitutive 0 NULL GeneID:527711 10 PSEUDO LOC527711 NULL similar to spectrin, beta, erythrocytic (includes spherocytosis, clinical type I) EMBV3_19354 TCTTATGAGGACATGAGAGAGATCGTGTGTATCAAGAAGCTGCGGCCCTCCTTCCCCAAC Gene GeneID:407128|BMPR1B:NM_001105328:2_cdna UTR3_Alt 2 NULL GeneID:407128 6 GENE BMPR1B ALK6 BMP15 BMPR-IB BMPRIB bone morphogenetic protein receptor, type IB EMBV3_08486 CCCGCCCTCCAAGTCCAACCTCCGATCTAGTCTGGCGCTGAAATGGATTAATAAGGAACT Gene GeneID:100337481|LOC100337481:XM_002692220:1446_cdna Constitutive 0 NULL GeneID:100337481 13 GENE LOC100337481 NULL ubiquitin-conjugating enzyme E2D 3-like EMBV3_24556 AGACGAATGGAGGGAAGCCCGGTTCGTATGCCAGGAGAAATGTGAGACTAGGGGTGTAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28637 TGGGGACATACCTGCATTCACCAGAGCATCTATCCCCTCAAACTAGCCCAGAATACTAGG Gene GeneID:100336611|LOC100336611:XM_002685462:25_cdna Constitutive 0 NULL GeneID:100336611 2 GENE LOC100336611 NULL contactin associated protein-like 5-like EMBV3_33931 CAACAGAATATTACTCAGGGCTGAAAAGAAATGAGTGCTGTGTGACAACCTAGAGGGGGG Gene GeneID:506281|IDO1:NM_001101866:38_cdna Constitutive 0 NULL GeneID:506281 27 GENE IDO1 INDO MGC179467 indoleamine 2,3-dioxygenase 1 EMBV3_16792 GCTAAAGAGGACTTCACTTTGCACCTCCAGGACGGTTCCTATAATATCCGCAAAGATGAC Gene GeneID:510507|LOC510507:XM_002692665:17_cdna UTR3_Alt 2 NULL GeneID:510507 14 GENE LOC510507 NULL similar to cholesterol 7alpha-hydroxylase EMBV3_03437 GGAATAGATAGAAAACTCTTTGACCAGTTGTGCTTACTTCCTCAGTGGCTTTCAACTGCC Gene BVT0102_355386 + 0 NULL GK000008.2:100849227-101049649 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228855 1 XLOC_138597 NonCoding TCONS_00228855 XLOC_138597 NonCoding NonCoding - 8:101013176-101018130 - TSS170511 3837 3 TCONS_00228855_6 91 0.158978368517071 2 0.225721784776903 4.51247547651186e-05 9.62145383008472e-06 0.000130882157562256 0.000207765904002057 3.41555567654409e-05 6.81121115671743e-06 0.000144138511103824 0.000164916543562396 0.000497632007517375 0.000201402736582379 4.369781897752e-06 6.60104697188615e-95 3.4044846904496e-06 0.00039966136222084 0.000200013868202347 0 0 0 0.000174612224179495 0.000438056948818239 5.80035763850407e-06 1.93397723939278e-06 0 0 3.31274794510335e-05 0.000230291654351975 0.000451996092460275 4.55097167703142e-85 1.26520979051125e-06 6.91454755697162e-98 XM_005206487.1 C5H12orf75 PREDICTED: Bos taurus chromosome 5 open reading frame, human C12orf75 (C5H12orf75), transcript variant X2, mRNA. 1e-12 80.6 89.83 0.0151159760229346 0 noncoding 0 0 0 0 0.0515967955241515 0.661524476961347 -0.0749484827027286 0.218899774724626 CGCTCGCCCCGCGCTCGTTCTCCGCCCTGACGTCTCCGCGCCTTGCTCCGCCCCTGGGGTGTGGGGGACCCGCGGCCACGGCCCCCGGGCGGCTCTAGGCGGGCGGGAGCCACCCGGGCTGAAGCCGCAGGGAGTGGGGGCTCCCCCAGGAGCGGCCAGGCACCGCGCGTGCGGGTGGGCACCCGGGGCGCACGGGAACCGCTAGGACGCTGGGTTGGTGCGCCCAGGTGGACACGTGCTCACTGGGGACCTGCAGACCCCAGCCCAAGGGCCTCAGGCATCGGTGGAGCTGTTTGGGTCATAAATCCAAGCCAACACCAGATTTGACATCCCTCTCCAGTATATCCAGAACTTCTTTCTGGCTAAGACCCATCACTTTCTTCAAACGCTGCATTTTCTCTTTACATCCAGCGCCATCTCCAGAGGACAAGTCTTTTGAGGGTGTTTGCTCACAGATAAACAAAGCTGTCAGTACTTCAGCAGAGTGACAGTGTACCCAGCTAGAGCAGAGAATAACAAGATGAGCAAAGTGAGACCAGAGAGGTTGAAGGACTCAGTCAAAGTCACAGAGCTGGGATTTCAGCTCAGCTCAGACCTCCAGAGCCCACATTCATAACCACCAGGCACCAGGCTCAGCCAGTCATATGAAGGGGAGGCAAGCCTCAGTGGTGAATAAGTGGTCCTTTCCCCTCCAGTGATACAGATATTAAAAAGGAATTAGAAGAACACAATGACGTGAATGGACCTAATGTCACTGAACCATACTCTTAAATGATCAGTTTTATGTTACGTATATTTTACTATGATAAATTTTTAAAAGGCATGATGGAAGGTGAGATGCCAAGCCCCTAAAGGGCTTAGACACCTTTGGGAAGTGACCAGTTTGAAAGCTTTGCATCTCAAGATAGAAGAATCAGGGAACATGCATCTGGCTGTCATCTACATTGCGGTTCTAGCTCAAGAAATGTGAATGGCCAGAGTGAGAAAACAGAACAAACAACAAGAAGAGAAAGTCCAGCAAAGGAGGCTGAGGAAGTGTCATCTGAGGATGAAAAGGAAAAATCAAGATGGATATTTCTACGAAAAATCACAATGGGAAAAAAAGGTTTTTCAATGGGGTCAGATGGTTTGGGGAGGTTTAAAAAAAATGATGCAGACCAAGAAGAGCCTTGGGCAGCCAGGAAACCATGGGTGGCATGGGAAGAGCTGTGTGTGTACAGGGCGAGCTTATAAGCAGTGACAGAGAGTTAAGAATGAATGAGAGGTGGGAAAGGAGCATCCTGGAGTACAAAACACTCTTTTAAGATCTTTGGATATGGAAGATAAGGGCGTTGGGGAGAACTGGAAGCAGTCTATGGGAAGCAAAGGCAAGTTAGAGGGTTGTTATATGAGGTGAGACTTGAATGTTTCAGAATCAAAGGGAATTAGGTATCAGGGAAGTGAGACCAAAGACATAGTCAAAAGGGAAGATAAGAGTTAGGTCTCAGATTAGATCAGAGGGCATCCAAACAAGCTCTGGTGGCCAGGTTAGCCTTGGAAAGAAGGGAAAATGAAAGAGGACAAAAGATGGAATGAGTAAGGGTGAAGACATTTTAGTTGAAGGAGAGAGAAGTTGAGTGAGCATATATCAGAAGCCTAGTTTTCTCAGCTGATGGAAGTGTCTTTGGTTGAGATAGGTGGGACTTCAAAGAAATAGAAATGGTTGGTAAAGAAACTGTGGGATATGGGGAATATTAAGACATGATTCTTAATCAGAAATATGCATTAGAGTCTCCTGGGTCACATTTCTCTGGATACATGTATAGAATTAAATATCTATGGGGTGAGGTAGGGGTTAGGGATGAACCATTGAACTAATTGGGTTTACTAGGAATAGATAGAAAACTCTTTGACCAGTTGTGCTTACTTCCTCAGTGGCTTTCAACTGCCTGGGACCAAAGATATGCAGTGGTCATGTTCACCAAGTGTTGAGGACTGTCAAAGCAGCTATGGCAAAAGGTCAAAGGGGAGAAGAAATTCAGAATGCTCGACCCTGGGGACATGTCCAGGTGGAAATGGAGCAGACTCTTCCATATTTTTTGGCTGCCCAATTTGTGAAGCCCTTTCCATCTTTAGGGGAATTCCCATACCACAAGCCATAGAGAGAGTCAGAGACAGTTCCCAACACAGAAGCTGGGAAATGCCAGGCTCTTGCTTCCCAGGTCCCTGGAAGTTATGACATGGCACGCAATCCAGGTTGTGAGGTATGTGCACTGGCCAAGGGCCTTGAAGACACAGCATTAGAGAATTCTCTCAGGCTTCTGCTCATCTTTGGTCCTGCCCATTGCTCAAGCCTCTTCTCATCTTCCCAGCTATTCTTCAAACTACGTGATAAATGCACTTTCAAAAAAAAAAATCAAAAAAAAAATGCACTTTCAATTTATGCCTTTTCTGCTCCTAGCAACTCAAATCAGTTTCTGTTGCTTGTGACTAAGAACCCTAAGTGAAACAGGAAGACATGTGAAGAGTAGAGGGAAAACATTTTCTCCTCTTCCAGCACTTCTCCCCTCAAATCTCTGAATTTTAGCATTTTAAAATCATCAAAACCATTACAAACACAGGCATTTATAACCCAAGTTGTACCACTTCTTTCATAAACTTTTATTGTGTAGTTATTCTATACTAGACATGAGGCAATGGCTTGGTATTACAAAGAATTCCTAGTCTAGTGCTAATATGGATGACTTTTTGCCCTCCACACATTTGAAATCTCAAAAGATCTATTACAATGGGTGCATAATGTGTGTAACAAATCACTAGTTCTTGCTGGGACATTAAACCACATTGCATAAGCACTACCCGTATTGTTTAATGGTTTTTCTGATAGATGCTGTATTGCAAAGCATTGTATGGAGAGAATACAGAATGCTCGATTTGCAAAATAGATGCTTTGGTAATAAAAATTGCAGAATCTATTTTAGGGCATGAGTCCTTTGGGAACCACAGATGATCAAACCTATTCTCTGTGGGGAAAACAGGAGTTCTGAAAACTGAGAGGGAAATGACTCGCCAAGACCCACTGAGTGAGTTAAAGTTTTGCTGAACAGAAGCTAAGAGTGTGAAATTTTGGAGTAACCTGAAGCTTTCCTTTGACAAAAGTAATTTTCAAAGGAATGCCAGGTGGTCCAAAATGCTTGTATTTGTATCAGCTCTCTTTTGCCTGAGATCTGTGAGAATCCATGGTCATTCAAAACATATGGCTGCACAGAATCAAAAGGACGGGAATGGTGCTGAGAGCCCTTTTGGCTCCTGTGGTTGTGAACAATTTGGGGAAGTTGATGGGATTTCAAGTATGTGATGTTTTTCTCAATGGGTTTCAAATGACAGGCCCATAGAGAGAGTCCCCATGGTGCAAGAAAGATAAAGAAGTTAGAAAACAGAGCTCCAGTGTGGGAAATAAACTAGGCGGGATGTCCCTTAAAGCATAGACTGTCGAAGCTCTCTACATAGAAGAATCACAATGAGAAACTGGAAAACCATCTAGAAATGAACAGTAGAACTTCCATTTGATGGCTTCCTTTTCTCTGGGCTAGCCTTGGGACTTGTTATTGTTCAGTCACTAAGTCATGTCCAGCTCTTTGCGACCCCATGAACAGCAGCATGAGCCTTGGCAATGTCAGCTGATCAACACTGTGAATTTCTAGAAGAAACCAAGGGCTATAAGGAGAGAATAGAGGAACAAGATCTGGATGGTTAGGGGTCATCCCACCTTCACCTTGCTGGGACATTCGGATGTTGATAAACATTTTGAAAAGTGGGATTAGGAGGTAGGTATGACACAGAGAAAAGGCATGAGCT TCONS_00226437 r 5' 938 TCONS_00226437 TCONS_00226438 r 3' 368 EMBV3_41990 GAGTCTGTGTATTGCTTGTCTTTTGTGCTTGGCTGGCAGGGTTCTTAAACATCTTCCCAC Gene GeneID:788114|LOC788114:XM_002687484:346_cdna Constitutive 0 NULL GeneID:788114 5 GENE LOC788114 NULL similar to olfactory receptor Olr1012 EMBV3_36004 ATTCCGATCCTTCATTGGCTGTCTCGGATGTGGACTTGGATCATTCTATAGGAACTCAGT Variant GeneID:515314|TOX4:NM_001075707:61_cdna 178^330 1 EMBV3_14341 GeneID:515314 10 GENE TOX4 MGC139878 TOX high mobility group box family member 4 EMBV3_20908 AACCTACCAGAAATGTTTGGGGATGTAAAGCATGGCATGGGCATCCCCTCCATTTCTATT Variant GeneID:534937|UPP2:NM_001076043:118_cdna 369^527 3 EMBV3_35159 GeneID:534937 2 GENE UPP2 MGC140537 uridine phosphorylase 2 EMBV3_31254 AGCAAAAGCTGGAGGGCAACATACTCTGGAATGTAGTGGCTGGAGAAAGAGACAAGAGGG Gene GeneID:506539|SIK3:XM_002693024:269_cdna UTR3_Alt 2 NULL GeneID:506539 15 GENE SIK3 NULL SIK family kinase 3 EMBV3_35852 TGCTCAGAATCCATTTTGGTGCAGCAGAGGCAGCAGCTTAGTGGCAGCTACATTCTGTCA Gene BVT0102_099527 - 1 EMBV3_15840 GK000004.2:68859812-68884955 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16927 ATCATTAAGATCCGAGCCCAGACAGAGGGGATCAACATCAGTGAGGAAGCGCTGAACCAC Gene GeneID:511475|RUVBL1:NM_001101076:26_cdna Constitutive 0 NULL GeneID:511475 22 GENE RUVBL1 NULL RuvB-like 1 (E. coli) EMBV3_24373 CATCCTTGTTGACCATCATGTCTTACCCAAGAACAATCCTCCTGGACTGTGTGAACATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37808 TGGAAAACATTCTGAGTGGAAACCCTCTTCTTAATCTCACTGGCCCATCCCAGCCTCAGG Gene GeneID:535258|CWC15:NM_001046399:14_cdna Constitutive 0 NULL GeneID:535258 15 GENE CWC15 MGC128364 CWC15 spliceosome-associated protein homolog (S. cerevisiae) EMBV3_04369 CTGTGATCTCTGAGTGTCCAGGTCGGGGGAGCAGTCGACGTTGGCCCTCTCCTGGGGCTC Gene BVV0102_040265 + 0 NULL GK000021.2:70351846-70358094 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25508 TCTGAAGCACGTGGTTGGACAATTCAGTAAGGTGCTGCCACATGATAGCAAAGCTCGACG Gene GeneID:539424|SPAG6:NM_001038185:139_cdna Constitutive 1 NULL GeneID:539424 13 GENE SPAG6 MGC133832 sperm associated antigen 6 EMBV3_04081 CGTTGGTGCGCCAGTTGTGATTTCTGCCCGTTCCCTTTTCCTTCGGTTGAGCCAGACAGA Gene BVV0101_005718 + 0 NULL GK000011.2:68277307-68383792 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23733 ATGATGCCAGTGCTCCTCGCCTAATGGTTCTTCGTCAGCCAAGGGGACCAGATAACTCAA Gene GeneID:513993|CSDE1:NM_001098025:50_cdna UTR3_Alt 2 NULL GeneID:513993 3 GENE CSDE1 MGC139021 cold shock domain containing E1, RNA-binding EMBV3_40281 ACCTAGAGTCACAGCTCCTACAACAAATCCTTGGGCAGCAACTCTCATGTGAATAAGATG Gene BVT0102_080304 - 0 NULL GK000005.2:29120315-29161689 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00194443 TCONS_00194444 TCONS_00194441 TCONS_00194445 TCONS_00194440 TCONS_00194442 1 XLOC_117754 Coding TCONS_00194445 XLOC_117754 Coding Coding LOC100848305 5:29135857-29148172 = TSS145095 294 1 TCONS_00194445_1 97 3 0.976368361214877 0.00506153359813519 0.00640010072866253 0.00733270422171551 0.00156273188131502 0.00544560575176612 0.00143442387561302 0.00232273569515206 0.00123141106355239 0.00068636834546745 0.000601356518968237 0 0 0.000151956938751383 0.000870110855831556 0.000611260385565304 0 0 0 0.00518068457197813 0.00286950141875948 0.00121876174181922 0 0.000120352597672551 0 0.00529466336053623 0.00382048678544984 0.00271921495083523 0 3.05925925924247e-05 0 XM_003582194.2 HIGD1C PREDICTED: Bos taurus HIG1 hypoxia inducible domain family, member 1C (HIGD1C), mRNA. 2e-149 531 100.00 0.996598639455782 NM_001109619.1 HIGD1C Homo sapiens HIG1 hypoxia inducible domain family, member 1C (HIGD1C), mRNA. 2e-122 441 93.20 0.996598639455782 TCONS_00194445_1 sp|A8MV81|HIG1C_HUMAN HIG1C_HUMAN HIG1 domain family member 1C; 3e-63 191 94.85 0.989690721649485 1 noncoding 0 0 0 0 -0.206710464938525 0.246761676162248 -0.00352584192802177 0.940483536762903 ATGTCTTCAGATAACCAGTGGTCAGCAGATGAAGACGAAGGCCAGTTATCCCGACTGATCAGAAAATCTAGAGACTCCCCATTTGTCCCTGTAGGGATAGCAGGCTTTGTGACTGTGGTGTCCTATGGTCTTTACAAGTTAAAATACAGAAGAGATCAGAAAATGTCCATTCATCTTATTCACATGAGAGTTGCTGCCCAAGGATTTGTTGTAGGAGCTGTGACTCTAGGTGTTCTCTACTCTATGTACAAGGATTACATTAGACCTCGATTCTTCAATAGGTACAAAAAATGA EMBV3_09350 GCTAAGCGCCACCGCAAAGTCCTTCGTGATAACATCCAGGGCATTACCAAGCCTGCTATT Gene GeneID:528329|LOC528329:XM_002697469:107_cdna Constitutive 0 NULL GeneID:528329 23 GENE LOC528329 NULL similar to Histone H4 replacement CG3379-PC EMBV3_41214 AGAGAATTGAGTCTAGGGGTGTAGGTCTGCCGAGAAGTTTCCCACTTGGTAGTCACAGAG Gene GeneID:516094|CDC7:NM_001037468:141_cdna UTR3_Alt 3 NULL GeneID:516094 3 GENE CDC7 CDC7L1 MGC128732 cell division cycle 7 homolog (S. cerevisiae) EMBV3_21274 ATCTACACCTACCTGCAACCCACGCACAACTACAACCAACGGCGGGGCAAGTTCATTTCT Gene GeneID:528254|LOC528254:XM_002697398:70_cdna Constitutive 0 NULL GeneID:528254 23 GENE LOC528254 NULL similar to olfactory receptor 94 EMBV3_13818 GTCTCTCGAGGCTGCCTCTGGCGCGAGTCAAAGCCATCTTCATTCTGGCACGCGCCGCGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22306 GCAGGCTTCTTTGCTAACTAAAAACTTCTTGGGGGTCTGGACGGTCAACATCTGCCTGAG Gene BVT0101_078378 + 0 NULL GK000027.2:5328861-5425377 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40279 CCTCTCAAACTCACTGGTCCACAGAACATGCACAACTATACTGATACCAAAGGCACGTGG Gene GeneID:790048|BOSTAUV1R431:XM_002695458:128_cdna Constitutive 0 NULL GeneID:790048 18 GENE BOSTAUV1R431 NULL vomeronasal 1 receptor bosTauV1R431 EMBV3_15205 GGCCCACAGAGATGAGGTCAAGAAGCGCTCAAAGGTTTGTAATTCTGCTCTAATTCGGAC Gene GeneID:532713|CAMK2D:NM_001046333:56_cdna UTR3_Alt 2 NULL GeneID:532713 6 GENE CAMK2D MGC128576 calcium/calmodulin-dependent protein kinase II delta EMBV3_17260 ACAGTCGTCCACTACTTGCGTGACTGTATTGGCCTGTCTGCCATCGGCTATGCCGCTGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01016 AGACAGCCGGTAGCAATCTCCTCAGCTTAGGCCCGGGTTAACAGTAAGGGAAAAGTCTAA Gene GeneID:615659|ZDHHC20:NM_001076388:67_cdna Constitutive 0 NULL GeneID:615659 12 GENE ZDHHC20 NULL zinc finger, DHHC-type containing 20 EMBV3_43644 GAATTTCTGTGCCACTGTGCCCAAGGATGGCCGTTCCTATTCCCCAACTCTCTTTGCACA Gene GeneID:517544|UBE4A:NM_001098999:89_cdna Constitutive 0 NULL GeneID:517544 15 GENE UBE4A MGC160110 ubiquitination factor E4A (UFD2 homolog, yeast) EMBV3_33973 CCATTAACTGGACGGTGTCATAAGCAGTTCGACCCATTTTGTCCGTTACAAGGCGTAGAT Gene GeneID:785845|ACP1:XM_002698404:327_cdna Constitutive 1 NULL GeneID:785845 26 GENE ACP1 CC2D2B acid phosphatase 1, soluble EMBV3_36408 AGGAGGATCTTCCAGGAGCCCTCCGAGCCGGTGGACCTTTCCAAGGACATTCAGCACTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11337 TGACACTCTTTTCAGCCCCCAACTACTGCGGCGAGTTTGACAATGCAGGTGCCATGATGA Gene GeneID:516175|PPP1CA:NM_001035316:21_cdna Constitutive 1 NULL GeneID:516175 29 GENE PPP1CA MGC127348 protein phosphatase 1, catalytic subunit, alpha isoform EMBV3_24217 GTGTGTTGATGGAGAATGGACAGCTTTACCTGTGTGTATTGAGGAGGAGCGTACCTGTGG Gene GeneID:514121|LOC514121:XR_084158:7_cdna Constitutive 0 NULL GeneID:514121 16 PSEUDO LOC514121 NULL similar to H factor 1 (complement) EMBV3_22106 GCTGCTTTAAGCAGCAGAACACTGCTTCTGCTCTCAGCTCCTGGTTTATGGAAGTTGAAA Gene GeneID:100296635|USH2A:XM_002693948:34_cdna Constitutive 0 NULL GeneID:100296635 16 GENE USH2A NULL Usher syndrome 2A (autosomal recessive, mild) EMBV3_18600 ACTGGAGAAGGCGACCCAGGAGCTGATTCCCATTGAGGATTTTATCACCCCGGTCAAGTT Gene GeneID:100337461|LOC100337461:XM_002694653:172_cdna Constitutive 1 NULL GeneID:100337461 17 GENE LOC100337461 NULL mitochondrial ribosomal protein L40-like EMBV3_43609 GCCCCACCTTAGGCACCTTCTCAAGTGGGTCTTAGAAGCCCAGTCAGGAAAATAAATGCA Gene GeneID:503624|PLA2G2D3:NM_001012686:63_cdna Constitutive 0 NULL GeneID:503624 2 GENE PLA2G2D3 NULL calcium-dependent phospholipase A2 PLA2G2D3 EMBV3_13984 TTATACCAGTGATTCAGGTACAAGACGTCCAGGACACCATCAGGTCCAGAACACAGCCCT Gene BVV0102_035538 - 1 EMBV3_32842 GK000021.2:66842555-66852434 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00120041 TCONS_00120049 TCONS_00120042 TCONS_00120046 TCONS_00120045 TCONS_00120043 TCONS_00120047 TCONS_00120044 TCONS_00120038 TCONS_00120050 TCONS_00120048 1 XLOC_073039 Coding TCONS_00120038 XLOC_073039 Coding Coding YY1 21:66817572-66847749 j TSS89734 6510 1 TCONS_00120038_1 160 0.0153609831029186 5 0.784431336161188 6.04983318305954e-05 4.8426003284928e-05 4.31249440491749e-10 1.14353973908795e-07 1.0688647932889e-09 5.27991627442089e-09 8.01077646905743e-07 5.86682719981855e-12 3.47333129306018e-06 1.65688215028161e-09 0.00020363356178109 0.00022792254877077 1.48640620163702e-17 9.52046754072784e-05 0.000108730561934021 0.00241027393667823 0.00210241499808056 0.0033928170890006 1.06271175378946e-07 1.6385582159526e-09 7.36254616649239e-27 4.09371686364489e-05 0.00131661238957634 0.00163244705895601 4.09260263998411e-05 0.000153141443068672 0.000142272555524807 5.31275642713248e-08 1.33469781207157e-08 6.74190564010121e-07 NM_001098081.1 YY1 Bos taurus YY1 transcription factor (YY1), mRNA. 0.0 2277 99.92 0.194162826420891 NM_003403.4 YY1 Homo sapiens YY1 transcription factor (YY1), mRNA. 0.0 2771 91.86 0.299692780337942 TCONS_00120038_1 sp|P25490|TYY1_HUMAN TYY1_HUMAN Transcriptional repressor protein YY1; 1e-116 341 100.00 0.99375 3 noncoding 0 0 0 0 0.0414096856213393 0.780628833964087 -0.000941780410138496 0.983976407882455 GCGGCGCACGGGCCGTTCGATTGGCCCAGGAGGAGGAGCGAGCAGGCGAGCAGATGAAAAAAAAGATATCGACCATGAGACGGTGGTTGAAGAACAGATCATTGGAGAGAACTCACCTCCTGATTATTCAGAATATATGACAGGAAAGAAACTCCCTCCTGGAGGGATACCTGGCATTGACCTCTCAGATCCCAAACAACTAGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCTGCCATGAGAAAACATCTGCACACCCACGGCCCCAGAGTCCACGTCTGTGCAGAGTGTGGCAAAGCTTTTGTTGAGAGCTCCAAGCTAAAACGACACCAACTGGTCCATACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAGGCTGCGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATGTGCGAATCCACACCGGAGACAGGCCCTATGTGTGCCCCTTCGACGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACACGCTAAGGCCAAAAACAACCAGTGAGAAGAAGAGAGAAGACCCTCCTCAGCCTCGGGAAGCATCTTCCAGGAGTGTGATTGGGAATAAACACGCCTCTCCTTTGTATATTGTTTCTAGAAAAGAATTTTAAAAATGAATCCTACATACCCAAGGGACATGTTTTGATAAAGTAGTAAAAATTAAAAAAAAAAAAAAAAAACTTTAATAAGATGACATTGCTAAGATGCTCTATCTTGCTCTGTAATCTCGTTTCAAAACCACGGTGTTTTTGTAAAGTGTGGTCCCAACAGGAGGACGATTCATGAACTTCACATCAAAAGACAATTCTTTATACAACAGTGCTAAAAATGGGACTTCTTTTCACATTCTTATAAATATGAAGCTCACCTGTTGCTTACAATTTTTTTAATTTTGTATTTTCCAAGTGTGCATATTGTACACTTTTTGGGGATATGCTTAGTAATGCTATGTGTGATTTTTCTGGAGGTTGATAACTTTGCTTGCAGTAGATTTTCTTTAAAAGAATGGGCAGTTACATGCATACTTCAAAAGTATTTTTCCTGTACAAAAAAAAAGTTATATAGGTTTTGTTTGCTATCTTAATTTTGGTTGTATTCTTTGATGTTAACACATTTTGTATAATTGTATCGTATAGCTGTATTGAATCATGTAGTATCAAATATTAGATGTGATTTAATAGTGTTAATCAATTTAAACCCATTTTAGTCACTTTTTCTTTTCCGAAAAATACTGCCAGATGCTGATGTTCAGTGTAATTTCTTTGCCTGTTGAGTTACAGAACGTGGTGCTCAGTCGTAGAATGTATTGTACCTTTAACACCTGACGTGTACATCCCGTGTAACAGAAAGGGCAACAATAAAACAGCAATCCTACAGAAAGAATATGGCAGAAAAAGATCTGTAAGCACAGTCTTATTTCCTTTTGTTGTCCAGAATAATTACAGTTCTTGAGCCTCCCAGAAATTGGAAGCTAAATAAAGCAACTCAAGTTTCCTTTATTTTGCACTCAGTTACAGTGACTTGTGATTGAAGCGATGCATGGATATTTTAATACTTCCCACATGTACTGAATTTTGAAAGAGTAGGTAACAGGCACCCCGAGTTAAGGAACTACCTCAGAGTACCCCGCACCGGGCCCGCTGGTAACAGGATTTTGGTTTTAGCTCCCCCAGCGAATGCGTGACTGAAGCGCTTGTGCCCGGCCTGTGTGTGTTTCTCAAGGTAAGGTGTCACCTGGCAGGGGGCGCAAGCAGAGGGGAGACCAGGCATTTCCACTGCTCAGGCCGCCTTCAGGGCAGCGCCCGCAGGTCCTCACTGGTTTAACAGGAAACGCTAAGGTTATTGGCGGTTTGGTTGGAGAGCCTCGGTCCCTCCATCTAGTGGACTCTGCCAGTGTCAGCACATTGTAGCAGGTGAACGCCAGCAGCTTCCCTCCTTCCGTGCTTCTAAGTGGATAGTGAGTGCAGACTGGCAGGGTGATTCGGTTATCAAGAAAACTGTACTCAGTGAGTACTTGACCTCGTGTTGTGACCTCTTAAATGTACGATTATAATTTCTGGAATTTACTTAGAGTCAAATATCAGACTCGTGAGACTATTTTATAAACTGCCATGATACAGCAAAATCCCATTTATTCAAAATGCAAACATACTGTATGTCTTTGTGCTGTATGCTTGACTCTGCAGAGTAATTGACAGACTAGCTTATACCAGTGATTCAGGTACAAGACGTCCAGGACACCATCAGGTCCAGAACACAGCCCTGTCTCTCACAGCTTCTCCATCGGTCCTGTCCAGGAGGATTGGCGACCTAATGACAGGGACCCTGTGGCCCTCCGGAATTTTGAAGTGCCTTCTGAATCGTAAATGAAAAATTTAACTTGAGACACTTTTTTTTGTTGTTGTTCAGAATCTGTTATCCATTGAGTAGTTTGATGGAACTGAGTTAATCAGAAGACCCCGCTGTTCTCTGGATAAGCCAGGCTTTGCTGTATCTGGCAGTCAGGAGAGAGGTAAGCCTGCGGTGGATGTCCCCTGCGAAGCTGAGCGCCCCAGCGCGAGCCTGTCCTGCTCTGCCTAGACCTGGGGCAGAGGCCTCCACCGCTGCCCGCGACTCGGTGCCCGTGCGTCCCTCCCCACCATCGGGTCAGCAGTCCCCCGAGGGGCTGTGTTAGGGGTCACGCCCTCACCCAGCGCTGTGCCACACTGGAGCCTGGTCCTGACGTCATCCTCAGGACTCCTGCCCAAGGGCCCGCGGCAAGACAAGACTTAGGCCGTGGGGACATCTCCCAGCGGCCCCAAGAGCCATGCCATGACCCTGAGTTGGAGGGAGGTTCTTCTTCCTCTGTGCCTTGACCCCTTGGGGATGCCTTCCGTCATCTCTTCTGTCCCTTTCTGTCTCTGAGTGGAATAGCCATTGCTCCCGTTAACTCTTCTGTGTTTTCACATGTTTTTCTCTCAAGCTGCAGAGTTCATTTCTGAAAGGAATTTCATTGGGCATTTGAAGCAAGTTTAACGCCCAAGTTCCTCCTTGACATAGCGCTCTGAATTTGCAACAGTAGTGTAGGACACGAGTGACAGCTTATAGAGGTAGTTCTCAGCGGGTATAACGTAACACCCATTCTGCTTGTGGTTAGAATTTATAATTTTGCTAAAGATGTAATCTACTAAACTTTGAAATGGTGTTCTAACAGTCGATTGTCTTGATTAATCTGATTTATAAGTAATATACATATTTTCTTACATCTGAGCTGAAATAAATGCATGTTTCTAGCATATGTAATATAAAAACTTGAGAGGGTAAGTTTACATTTAACAAGATGTTGTTTTCTATTTTTGGATTTCTTATATTATTTTCCCCCCTTTTTTGGTGGTGGGGGTTTAGGGGGAAGCATAGTATTTGTATAAAGAACTGTCACCCCAGAGTGACATCTATTTTCCAAGGTGACCTTGAGCTCGCTGTTGGTTTCATATGGTGTGTGTGTGCTGTACCTAGATTCAAGGCCTGTGGATTTGAGGGAAATGGAGATTTTTTTTTTTTTTTTTTAATTTGGTTTTCATGTACATTCTTTTAAATGTCAGTTATTTTGTTAAATTTGAGTAAAATGAAAACCATTGCGATACTCTGCTGGAGGCCTGCGGGTGTTGGCGAGTTCTAGTTGGTTTCTCCGCAATAGATGAGAGTCCTTCATTCAGCGAGAGGCCGAGGCTGTTGAAGCGCTGTCGGTAGGCTTACTGCCGCACGCACTCCTTAGCCAGACTTACCTACTGTACCTTCAACTTGGGATGTGTGTCTGCGGCACAGGAAGACCTGGCCCTCTCCGGTTTCGAGTTGGAAACCTGGTAGTCCACTCCAGGACAGCTACAGGCAGAGAACGAGGATCGCTTCCTGTATCTTGTTTCCTCTAATTTTGGGGTCAGCATGCTTAGCAAGGCCATGTTATTAGTCCTCTGTTCCATCTTCTTGACATCTGACCACCAGCAGAAACAAGGATCCCAGAGGTCAGAGCAGTGGTGAGAGGTTCCCCAGCGTCCCGCGCGGAGCCCGCAAGGCCTCTGTCCAGTGCACGCGGCCTTCGCCTAGCTTCCCCCCGTGCCTGTCGACGGCAGAGCCCTTTGTCCTGTCTCCCCTTGGCCTCGCTGCCGGTACAGCACCTGTCAGAGCTCGGGACCGCGGGGGTGCACTCCTTTGACCCCAGGAGGTCACGGAGGAGGCTGGACCCCTGAGCTGTGCTTCCTGGCGGCCGTGGTCACGCGCTCCACGGTCTGCTCTTCGGCTTTCCAGAACGTGCCCGCGGGAACCCCTGTGCCTGCACAGAAGCATTCGACTGCATGGCTGGCTAGGTCTGCACCCCAGCTTCCCGACTTCCTGGGCCATGTGGGCTGTGCTTAGGTTCCTGGGTTGCCTGAAAGCAGTCAGTGCGGGGCCCTTAAGAGCCTTGGCAGCAGGCAGGAGGGGCGGGCCCTTCACGAGTGGGCGTGTCCCGCGGAAGGCCGTGTCCCGGGAGTGCCTTGTCAGAGAGGATGTTTGCTGGAGACTGGGCTAGATGGAGACCTGATGGGAGGGGCGGGCAGCATACCGTGGACACACTTCATCCGCCCCTCTCCTTCCGGAGACCGGAAGGGAATGTTGAAGGAGAATATGGGCGTTAGGTCAGGAGGCAGATCAAACTCTCCAGACTTGTCGGGCCAGCCCTCATGTCTTTAGCCCACATTCCGGGAGTCTGCAGGGAGGTGAGCGTGGTGGCATCACAACCATCTAAAGCAAGATGATTGATTTTCCGCAAAATGTCAGGTTTGATCAGATTGATTGCTTTTCATTCATTAAAGACCTTCAGACGCCATAAGAAGGAGCACTGGGATGTCATAGGAAGGGGCCGGCTGCTGTTGGTATCTTCTGTTTGCTGCTCTGTCTGGGAGCTTGCTCACTGTCTGCATACAGTATGGAGGTGGAAAGGGCATCAGTACCAAACAGCTATTTTCTACAACATCCATAACTGGTATGAGGCTCTGTTATCTACAGATGGTGATGGGTCAAGCTATCTTCATAAAACAATTCTGTTTTTATTCATTTTCCGGTAACTTCTGTGGGCCCTGGCTCAAGGACTTGGCATTGCGTCTCATGTACATCTTTTTCTTAAATGTTGTTTGCCATTTCTGGAATTGTCCTTGGTTTTTCCTTAGCTCATAGGTCATAGATGCAGAAATATTATAGTATTTAAGGCATCCGCATCAAGCATCAGATGGCTTTGCATCCAGAAAAACATTTAATGATAAACTCCGTTTGAAGCACCAAGCATGTGTAACATGGCTCTATAAAATATAATAAACGCATAATGTTAAGCTTTTTAATGCCTGTGGTTCTTGTTTGTTCCTGGATCTCTAAGCCGCCTGTTGCTGAGTTTCATTACACAGTACAAGTGGCTGTAAGCTCCTGTCTTAACCACTGGACCACCAGGGAAGCCCCCTCACCCACTTTTTAGAAAGCACAACCAAATGAAATTTGCATGCAGTTAGACCCATGACCCCCGGTGTTAGTTCTGGAAGCTCCCTGCCAAAAAAAAAGAAAAACCTTATTCCTAACTGGGATAGACTCTAAAGCTTGGTAAACATATACAGAGAGCTACATAGGATTTGGGGGCAGGGCAACAAAATACTCAGCCCTACCCTCGTCCAGCTAGGGTCCTGGTGACTGCTGGACTGCAGATCGGGGTTTATTACTCCTTAATTCACATGACTTTGCCTCCTCTTTGGAGAGGGCGAGTCCAGGCCCACATGAGGCCCAGAACTGCCGAGGGAAGGTCTGAGGTCCAGCTGTTTTGAGGAGCAGCCATAGTGAAAGAGTGTGTGCATCTTCAGGTTTGAGGTGGGAAGGACCTGGGGTTGCTGGGGCTTTGGAGTTGCTTCCTGTGGTCCCCCCAGATAATAGACGGGCGTCCCTCCTTTGCTTGGGCCCACACCTCCACCCGGCTGTAATAACACTGAGGGCTGGGCTCAGGACCGTACCTGGCACTGTGAACACCTTTTGAGTTAATTCCTCCAGACTGCCCTTGGAGGAATTCCATAGGTTACTCGTGCCAGGGATGAGGGTCATTGGCAATGTCAGTGACTCAGGCTGCCTGCCTTCCACTGCACTCTGCTTGCCACAGTTCATCTCCACCTCCCTTTCGAAAGAATCGCTGGTCCCTGTCTGCGGTGGGACGCCACGGCCTCCTGGCTTCCAGCTCATCAGCCTCTCTGGCTCTTAGAGCATGTCCTGGTCTTGGGTCTGGCTCTCACTGCCAGAGGTTTCAGCTCCTAGGTCTGGCCTGGGTCCCTCCTCTCTGGCCTGCCGTTGGCAACTATGCCAGTCTCCGGCGTGGGGGTTGCCACCTCACCAGAAGCTACTGTGACTCCC EMBV3_30050 TGGTTTTGCTGTGTGTCTGTGTGTGGACTGGTGTTTGCATTTTAACTGTGCAGATGACCC Gene GeneID:537246|TRIM24:XM_002686994:851_cdna UTR3_Alt 2 NULL GeneID:537246 4 GENE TRIM24 NULL tripartite motif-containing 24 EMBV3_36360 AGAGAGCCGAGGGGGCTTCCCCAGGTCACTAGATCAGGTGTTTGATACGCTGGAGAGCCA Gene GeneID:527837|CDCA4:XM_002696793:518_cdna Constitutive 0 NULL GeneID:527837 21 GENE CDCA4 NULL cell division cycle associated 4 EMBV3_31834 AGTAACTGGTGTGTCCTTATGTCGACCCCCAAGAGCAGGGATGTAAGCTGTGTCCAAATG Gene GeneID:613717|KCTD9:NM_001102269:10_cdna UTR3_Alt 4 NULL GeneID:613717 8 GENE KCTD9 MGC159927 potassium channel tetramerisation domain containing 9 EMBV3_21030 GCACCGCAATGAGAAGCCTAGACACTGCCACTAAAGAGTAACCCCTGCTCACCACAACTA Gene GeneID:789229|LOC789229:XR_083948:49_cdna Constitutive 0 NULL GeneID:789229 18 PSEUDO LOC789229 NULL similar to cationic amino acid transporter 5 EMBV3_24720 TTAAAAAACCCTCTTCCTGCCAGTCTTGCTCACTGTTCGGCACCTACAGAATTGCCTGGG Gene BVV0102_344949 + 0 NULL GK000005.2:68254507-68385644 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39202 AGGACCTGGTGATTGAGCTGGATGTGGCAGCACAGGAAGAGGGGAAAGTCAAAGATGCTG Gene BVT0102_147740 - 1 EMBV3_36398 GK000008.2:45178871-45219431 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11449 GGACCAGCAGGTGGAGTTCATCAAGGAGCTGGGAGACCATGTCAGCATCCTGAGCAACAA Gene GeneID:527430|LOC527430:XM_002700229:206_cdna Constitutive 0 NULL GeneID:527430 X GENE LOC527430 NULL similar to Fth1 protein EMBV3_17923 TTCTATGTGTGTCAAAGTCAATAGGCTGATGCTCTCTCAAGGGTGTTTCCCAGCTCTAGC Gene BVT0102_068017 + 0 NULL GK000001.2:37866951-37875386 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08018 AAGAGAAGAAAGAGCAGCCGGCTCCTACCAGCAAACCCGGAGGCGGGGACGCTAAGCAAT Gene GeneID:100297679|LOC100297679:XM_002690071:2_cdna Constitutive 0 NULL GeneID:100297679 9 GENE LOC100297679 NULL hypothetical protein LOC100297679 EMBV3_19214 GCCGAAACTAAAAAAGATCCAGAAGACACGGGCGAGGAAAAGTCAGCCGCCCCTTCAGCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22475 GAAGAGAACCACGATCCCCTTTCTCCTCAGAGTGACAAAGGAAAAGGCCAGACCTCCGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34601 ACCTGGTCATCAGTGTCTTCATGGTTGTTGCCCCACTCTTGATCATTGTGGCCTCCTACA Gene GeneID:524662|LOC524662:XM_002686525:717_cdna Constitutive 0 NULL GeneID:524662 3 GENE LOC524662 NULL similar to olfactory receptor 1337 EMBV3_39533 AGATGCTTATAGGAGATGTTTCCACTCTCAAGGAATGCCACAGATGGTGGAGGAAGTCAG Variant GeneID:615552|MGST2:NM_001076382:59_cdna 602^921 1 EMBV3_28371 GeneID:615552 17 GENE MGST2 NULL microsomal glutathione S-transferase 2 EMBV3_12028 CAAGACCATCGTGGTGTACCGCAACGGCGACCAGTTCTACGTGGGCCGCAAGTTCGTGCT Gene GeneID:100139500|LOC100139500:XM_002689965:39_cdna Constitutive 0 NULL GeneID:100139500 8 GENE LOC100139500 NULL similar to doublecortin domain containing 2 EMBV3_01359 AAGACTACCTTCCTCCCCCCAGGTGCTATTGGTCATCACTGGTCTTCATAGTCAAGCCAC Gene BVV0102_141360 - 1 EMBV3_30460 GK000022.2:48838787-48841886 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19469 AGAACAAAGCGTTATTGTGCAAACCTGTCACACAGACCAAGGCTACCTCTTGCAAACCAC Gene GeneID:618234|ZMYM6:XM_002686485:567_cdna UTR3_Alt 2 NULL GeneID:618234 3 GENE ZMYM6 NULL zinc finger, MYM-type 6 EMBV3_23526 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32558 CCTGTACTACGGAGCCAAGTCCTTGCGGGGCACAGACAGAAAACATTATAAATCCACACC Gene GeneID:616166|RALGPS1:XM_002691667:424_cdna Constitutive 0 NULL GeneID:616166 11 GENE RALGPS1 NULL Ral GEF with PH domain and SH3 binding motif 1 EMBV3_33997 ACCACTAAAAGCACCCTTCATTCTTCAGTTATGGCCAGTCTTAATGCTGTGCGGACCAGC Gene GeneID:518274|ANLN:XM_002686829:10_cdna Constitutive 0 NULL GeneID:518274 4 GENE ANLN NULL anillin, actin binding protein EMBV3_11672 TGCATTAGTATGTTCTTAGTAAACTCTACCGAAAGATAAACCTCAATGTCTCTTGGTGGG Gene BVV0101_027598 + 0 NULL GK000009.2:80619873-80649061 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36023 GGCACAGGCTTTAACTGGTATAACTTCCCAATGATCAGAACAAGCTCTAGCACCATAGTA Gene BVT0102_162880 - 0 NULL GK000003.2:100972709-101020395 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38301 GAAAAGATCTGGTAGTTGGATTTGTTGCAGTTTGGACGTCACAGACTCAACCCAGAAAAC Variant GeneID:506631|SLC25A17:NM_001045948:144_cdna 440^798 1 EMBV3_40954 GeneID:506631 5 GENE SLC25A17 MGC126926 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 EMBV3_31009 GGACAACTCTGGATATGGGCGAACTAAGAGCCTGAAGAATAAGTAGTAAGAACATCAATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11594 GGCCACCCTTGTTGGCATACCCTCATGTACACAAATCTGATGCGTTTTTCTGGGTTTTTC Gene BVV0102_145632 - 1 EMBV3_03820 GK000030.2:69060461-69100653 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00251685 TCONS_00127087 TCONS_00127088 2 XLOC_154626 XLOC_077562 Coding TCONS_00127087 XLOC_077562 Coding Coding DUSP7 22:49379909-49387454 j TSS95137 3433 1 TCONS_00127087_3 368 3 0.545334040296925 0.0224022459179142 0.0190191078824358 0.0171290196542453 0.0143654856170573 0.0216804573054515 0.0118724944507648 0.00790809308780846 0.0173311312388329 0.0177297877113775 0.00970910977223373 0.00450101506189246 0.00218389604142468 0.00633880117268566 0.0196881489162866 0.011531376851118 0.00264506406083367 0.00149736089685519 0.000916012620785269 0.00643088567573658 0.00837052563217194 0.00410344961810175 0.00254325967754375 0.00117667386369751 0.00110497461321594 0.00914078674507669 0.00641284222181094 0.00473189883752182 0.00141792521109991 0.000933862668131588 0.0022084272337623 NM_001101294.2 DUSP7 Bos taurus dual specificity phosphatase 7 (DUSP7), mRNA. 0.0 4551 100.00 0.734634430527236 NM_001947.3 DUSP7 Homo sapiens dual specificity phosphatase 7 (DUSP7), mRNA. 0.0 2304 83.37 0.604718904748034 TCONS_00127087_3 sp|Q91Z46|DUS7_MOUSE DUS7_MOUSE Dual specificity protein phosphatase 7; 0.0 764 99.46 0.997282608695652 2 coding 0 0 0 0 0.0472066619530243 0.796146617707418 -0.030804274605136 0.66694241486401 ATCTGGATCTGGCGCCGGCACCGGGGCAGACGCGGCGGCGGGCGCAGGGGCCATGCCCTGCAAGAGCGCCGAGTGGCTGCAGGAGGAGCTGGAGGCGCGCGGCGGCGCGTCCCTGCTGCTGCTCGACTGCCGGCCGCACGAGCTCTTCGAGTCGTCACACATCGAGACGGCCATCAACCTGGCCATCCCGGGCCTCATGCTGCGCCGCCTCCGCAAAGGCAACCTGCCCATCCGCTCCATCATCCCCAACCACGCCGACAAGGAGCGTTTCGCTACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACGACGAGGCCACGGCCGAATGGCAGCCAGAGCCCGGCGCTCCCGCCTCGGTGCTTGGCCTTCTCCTGCAAAAGCTGCGCGACGACGGCTGCCAGGCCTACTACCTCCAAGGTGGTTTCAACAAGTTCCAGACAGAGTACTCGGAGCACTGCGAGACCAACGTGGACAGCTCGTCCTCGCCAAGCGGCTCACCACCCACCTCGGTGCTGGGCTTGGGGGGTCTGCGCATCAGCTCTGACTGCTCGGACGGGGAGTCAGACCGAGAGCTGCCCAGCAGTGCCACCGAGTCAGACGGCAGCCCGGTGCCGTCCAGCCAGCCAGCCTTCCCCGTTCAGATCTTGCCCTACCTCTACCTCGGCTGCGCCAAGGACTCCACCAACCTGGATGTGCTCGGCAAGTACGGCATCAAGTATATCCTCAACGTCACGCCCAACCTGCCCAACGCCTTTGAGCACGGGGGCGAGTTCACCTACAAACAGATCCCCATCTCTGACCACTGGAGCCAGAACCTCTCCCAGTTCTTCCCCGAGGCCATCAGCTTCATTGACGAGGCCCGCTCCAAGAAGTGCGGGGTCCTGGTGCATTGCCTGGCGGGCATCAGCCGCTCGGTGACCGTCACAGTGGCCTACCTGATGCAGAAGATGAACCTGTCGCTCAACGATGCCTACGACTTTGTCAAGAGGAAAAAGTCCAACATCTCACCCAACTTCAACTTTATGGGGCAGCTGCTGGACTTCGAGCGGACGCTGGGGCTGAGCAGCCCGTGTGACAACCACACCCCCAGCGAGCAGCTCTATTTCTCCACACCTACCAACCACAACCTGTTCCCACTCAACACGCTCGAGTCCACGTGAGGCCGGGGGCACTGGGCGATGGGCTAGCCCCTCCCGGGCCCCCACAGGGCCCGCCGGCAGGGCCCAGGCCTGCCGCCTCTGGCCCGAGGAACCCAGACATCACCTGTGCCGAGGTGAGCTCCCCTCAGTGTCCCACAGCCAGGCCTCCACCGGCAGGACTTTCCGGAGGGGCCCGAGGCGATCAGACACATGGCTTTGGGAGTCCCTTGGGGCCTCTCCTTGTCCCAGGACACTCCTTTCTGCTGATGGCTCAGCCAGTTTGGCTGTTTTTTTAAAAGACACATCCACGGACCTGAGTTTACTTTTTACTTTTGGCAGGTAAACCCAAGCTCCCTGGAGCAGAGAGCGTGTTGAAGCTCTGCTTGATTGCTCTTTTCTGTAATGGAAAGTGTTATTTTCAGGCTACATGCAACAGTGGACTGTATAAACCAGTATTTCATCCCTTTCTTGATCCAGTGAGAGAGAGAGAGAGGTGTTATCAGTTTGTTTTTCTTCCTATTTCAAAAAGCAATTCTTGAGTTTTTGTTTCTGTTTTAATGGAAAAGACAAACCCCACGTTGATCTTGACCAAATGCGTTTTGCACATGTGTGAAGCCTCCGTTTCTGCAGCGGCCCTTAAAGGGGTGGTTCGCTGCTCCCAGCAGGGGTCTCCCAGGCCTGCCCGTATCTCCCGCCTCGGCCGAGCCCACCTGGCGCTGCATTTGCCTGTGATGCCCGCTGTGAGTGGTGGGCTGGACGGGTGACCTTTGCCTTCTCTGCCCACCCACTTGTCCTCTGGTAGTCCCTGCAGACCACCCCAGGCAGAAGAGGAGGCCACAGGGGACTGCCAAGCAGTAGCATTAACCCTCTGGGCTCAGCCCTGAGGAGGGCCCCAGGCCCTTTTTATCCACTACTTCTGTCTCTCTCTCTCTCTCTCTCTGGCTGAGGGAGCAGGCCCAGTGGCTGGGGAAGTTTAGGTGGAGGGCGCAGCCCTGCCTCCCAGGTCTCCTCCTCCACCCTGGCTGTTGCTTGGGTTCCAGCTGCCACTCCCAGCCCCTCAACCCGTGGAAGCCGGCCCTGTGCGCACCTTGCCCATGCCTTGGGTTAAGAAACTCATCCATTTCAGCCCCGGGGGGTGGGGGATGGGGCAGCAAGGGCGGACAGGGAAAGGGGTGTGAGGCCTGTCCATCCCGCCACCCAAGCCCGCTGTCCACAGAGCAGAGCCACGGGTCCGGTATCCTCTGGTTCCGTTCCTTCTCCAAGCTCCATTTTCCCGGGTGGTGGAGCTGCATGGGTCCTAGGGAGGGCCGGGGTCCCTGAGCGAGCCAGCACTCGGCGTGTGAGCGAGGCCACGGAAACCCTGCCCCAATGCATCTTACCTCACAGGGCTGGTTTTCAGGGATTCTTCAAGGCAGCAGGTGAAAATCTTGCCACAGTTGAGAAATTGACAAGAAGCTTCCATGTTGTGTACATGGTTCTCTTTCTCTCTTTTTTACCTTTGAAAAGAAAAACCCAGAAAAACGCATCAGATTTGTGTACATGAGGGTATGCCAACAAGGGTGGCCAGTTTTGCTTTATGATCTTATGAAGGAAAATTTGTGACCCTACACACACACACACACACACACACACATATATATATATATTCCCGAACGGGACTTTGTTTATATTGCAAATAAATATTATTTTTTCTTTAAAATGAGTGGTGTCTGATAAGGGCCAGGGCAATGAGGAGAAGCACTATGGCCATATCCGGGGGCCTGCTGGGCACTTACTGGGACTGGTCAGAGGCACCCAAAGCTGGGAGGAGCAGCTGGGGTGTGGGTCGGCAGGGACACTGGGGCTTTGGCCCCCTGGGTGACAGGAGAGCGAGGTGTGGAGACGTTCCGTGCGCCAAGGTCACACAGCAGAGCCCTGCTTGCCCAGACACACCCAGCACTGCCCGCCCGGACGCTGCCCAGACCGCCCAGCCGCCCCAGGTCCTGACTGGCCCCCGCAGCCCTGGCCCTTCCTCTTGCTGCTCTCGGGGATGGGACATGGGCTGTGCATCTGTCAACCTCACTCTCCCCCACACCATCCCTAGGATGCCTGCAGGACCTGATGCTGGTCAGTGAGTGGGCCAGCCCCACGGGAGCCAGGTCCCTCGGCCCCCCTGAGCCACAGCATCCATTTCTGTACAGTGGGGCCAACACACCCCGATGCCTGGTGTGTTCCCGTTCAGGCATGATGAGCCTTCATTTCCTGGTCTTGACCTGGGCCTCCAGGGGGGCCTGGTCCATGGCTGGCTTCCCCAGG EMBV3_00520 TAGGTTGTGGAAGGAAAGCACCTTCCACCGGAGCTCAGGTGTCTGAGCTGACTCTTTCCT Variant GeneID:541250|PSRC1:NM_001046501:182_cdna 43^88 2 EMBV3_13881 GeneID:541250 3 GENE PSRC1 MGC137552 proline/serine-rich coiled-coil 1 EMBV3_14219 GGGTGCCGTTGCCTTCTCTGGGGAAGCAATTCTAGACTTGTCCAAATGCTGCAAAAACAC Gene BVV0102_366320 + 1 EMBV3_06683 GK000010.2:59971151-59984276 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00080561 1 XLOC_049445 NonCoding TCONS_00080561 XLOC_049445 NonCoding NonCoding - 17:50384106-50385700 - TSS60501 1594 1 TCONS_00080561_2 76 0.238393977415307 1 0 0 0 0 0 0 0 0 0 0 0.000469785024811134 1.43612520586762e-06 0 1.80005059933777e-06 8.85319111165636e-05 4.61687538463291e-05 0 0 0 0 0 0 0 0 0 0 0 0 2.41033234837088e-05 3.04555161907757e-06 0 NM_001206779.1 IGSF5 Bos taurus immunoglobulin superfamily, member 5 (IGSF5), transcript 9e-23 113 73.93 0.127352572145546 0 noncoding GGGGGCAATAGACCCATAGAACAAATGTCATAGTCAGCAGTCTGTCTTTGAGCTAAATGACACCTGCAGGGTTCTCTGAGTCCCGAGGACAAGGAGAAGCAAACATAGGGCATCTAATGTTGAGAGAACTGAAGGCCACGTGAAATTCGACAGGCAAAGTTAATGGTTTATGTCATCTGACTTTGTGAACACATGTGAGATGATCTGCAAATATTATCTAGCTAAAGCTGTCTTTGAATAACGCTTTCCTCCAAGATCTTGCCACTGTATTACTCTAGAGCAATAGCAGCAGCAAGAGACGCTTCAGAGGAAAGCCTCTTTCATCTGGGGGTCTCATGAGAAATATCCATTGCTTTCTTTTCCATTTAGAAGAGAAGCAAGAATTTAATAGGTGTGATTCCTTTTGCAGTCTTCCATTGTATTGACCTTCCTCAACTAAGGGACACCTGGTCTTACATTATAATCCCTCCTTATGAGCCTGCTCTCAGCATGAGAAATGTAGAGCTATGCAGAAAAGCTCGTGAATCAGATGTTGTTTCTCACACATATGCCAAAAATGCATAGATCTATATGAAGCTATGCAAACTACATAAAAACCCTTTACTAATCAGTTTTCTTGAGAATGAGATATTTCACATCTTTACAGAGTTTTCAAAGTGAATGCTTAGAGTTTGACACTTAGGGAGAACCTACATCTTTTTTTTTGTTTTGCCTTGTATTCAAGTAAACCCTGTAGTAAGAGTAGGGGTAATAATTGCTACCCTATATGGAGTGCTTATTATGAATTGGGCATGATTCCTAGAACTTAAGATATACTGTGAAGGAAAAATGTTGCCAGTCACATCAGTAAACGGAGGCCACTGCAGCCATCAAGCCACTATTGTAAACCCAGATGGTGCACACTTAGGGAATTTAGGATGGAGACAAACGAGTGGCCAGCTGCTAAGCCCTCAGCCACTGCAGCCACCCCCAAAAGTGATTCTGAGGGGATTCAGGATGGAGAGAAGCAGGATACTTCCTAGATGGTTAAGGTTCATAACAAGGGAACGATCTCAATAGCCCAGTCTTATATCTTCCCATCGATAGAAAAGTGCTATATCTATTAACTTGAGATATCTGCTTTTCTTTAATAAACAGTAATCTTTTGACGGGCTTCCCCAGTGAATAACAGGTTTTTCTAATAGCTGTTTTTCTAATGGCTATCTTATGAGGTTTGCTTCATACACAGAAGCTCAACGGTACTAGACAAGAAAGCAAAGATGAATACTTTTAACTAAAGGTATCTCTTCCTCAGTCTTATCAAAGTACCAGAGAATGTTTTGGCAGTAGATGCCTCAAAACTTTCTTAGACCAGCCTCTGCACACCACCTGTAAGCACCAAACCAACACTTTGTGGCCAGTTTTAAAACTCGTGGAAGAGACTTTTGCCCTGAGAGGGGGTCTGAAAGTTATTAAAGGATTTACTATGTAAAAGTACAGAATGGAGGAATTGAGGTATTTTTGCAGCATTTGGACAAGTCTAGAATTGCTTCTCTGGAGAAGGCAACGGCACCCCACTCCAGTACTCTTGCCTGGAATATCCCATGGACGGAGG TCONS_00077229 . 3' 507863 TCONS_00077229 . 3' 509456 EMBV3_24713 CCAGGGGCAATTCCATGTATATGCGATACCAAGAGTAGTCAGATTCACAGAGACAGAAGG Gene BVT0102_201979 + 0 NULL GK000022.2:50987948-50991901 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127170 TCONS_00127173 TCONS_00127171 TCONS_00127172 TCONS_00127168 1 XLOC_077590 Coding TCONS_00127173 XLOC_077590 Coding Coding TRAIP 22:50970362-50989329 j TSS95177 3418 1 TCONS_00127173_4 472 0.179052077238151 15 0.820573658125066 0.00139360183619655 0.000774897148205728 0.000827407273523794 0.000654276498357699 0.000317606062617028 0.000456819446167728 0.000351286146012665 0.00101113161998906 0.000725990230426179 5.65639625616865e-05 9.07047138710774e-05 0.000268991555189003 0.000226569707658968 0.000536859220115926 5.58650873122199e-05 0.000704150772392951 1.82471740854621e-12 0.000631311539733425 0.000446816090330414 0.000446470537888219 0.000419898534359667 5.1571673643792e-10 5.59448300435054e-05 0.000731710613816658 0.000565880434179775 0.000291045789982076 0.000388228177747846 1.6056102039363e-05 0.000165716195188767 0.000443936022410432 XM_005222853.1 TRAIP PREDICTED: Bos taurus TRAF interacting protein (TRAIP), transcript 0.0 3665 100.00 0.594207138677589 NM_005879.2 TRAIP Homo sapiens TRAF interacting protein (TRAIP), mRNA. 0.0 1939 81.57 0.589233469865418 TCONS_00127173_4 sp|Q9BWF2|TRAIP_HUMAN TRAIP_HUMAN TRAF-interacting protein; 0.0 781 81.53 0.995762711864407 4 coding 0 0 1 1 -0.0438890720835709 0.765790477155223 -0.00792127898180447 0.887088241772512 GCGCCGTGGAGCCAAATTCGAAGCTAGTGAAGACGCGGAGGCACGGCCACCAAGCTGGACCCGTCGCCGTTTCCTTGGCTACCTCGGCTACTCGAGACCAGTCATCATGCCTATCCGTGCGTTGTGCACCATCTGCTCCGACTTCTTTGATCACTCCCGCGACGTGGCCGCCATCCATTGCGGCCACACCTTCCACTCGCATTGCCTAATTCAGTGGTTTGAGACAGCACCAAGTCGGACCTGCCCGCAGTGCCGAATCCAGGTCGGCAAAAGAACCATTATCAATAAGCTCTACTTTGACCTTGCCCCGGAGGAGGAGAATGTCTTAGATACAGAATTCTTAAAGAATGAACTGGATAATACCAGAGCCCTGCTTTCCCAGAAAGAGAAGGAAAAACGAGACAGCCAGCTCATCATCGACTCTCTGCGGGACACGCTGGATGAGCGCAACGCCACTGTGGAGTCCCTGCAGCGGGCCTTGGACAAGGCCGAGATGCTGTGCTCCACCCTCAAGAAGCAGATGAAGTACTTGGAGCAGCAGCAGGATGAGGCCAAGCAAGCACGAGAGGAGGCTCGCCGACTCCGGAGCAAGATGAAGAACATGGAGCGAATCGAGCTCCTACTCCGGAGCCAGCGGCCTGAGGTGGAGGAGATGATCCGAGACATGGGTGTAGGACAGTCCGCGGTGGAGCAGTTGGCTGTATACTGCGTGTCCCTCAAGAAAGAGTACGAGAATCTAAAAGAGGCACGGAAGGCCTCAGGGGAGCTAGCTGACAAACTGAAGAAGGACTTGCTTTCTTCCAGAAGCAAGTTGCAGACAGTCTGCTCTGAACTGGACCAGGCCAAGTTGGAGCTGAAGTCGTCTCAGAAGGACTTACAGAGTGCTGACAAGGAAATTGCGAGCCTGAAAAAAAAGCTGACGATACTGCAGGAAACCCTGAAGCTGCCACCAGGAGACAGTGAAACTATCAACCGCCTCGTTTTAGAGAGCCCAGCTCCTATGGAGATGGTGAGCCTGAAGCTTCGCCGGCCAGCCTTTGGTGATGATATTGACCTCAATGCCACCTTTAATGTGGACACTCCCCCAACCCAGCCCTCCAGCACCCAGTATGGCCTTGCCAAGAGGCTCTTCCCTAAGAAGGCACATTCTCCTGTTCAGGACATTCCCAAGAAGATGCCCAAAGGCCCCAGGCAGGAGTCCCAGCTCTCGCTGGGGGGCCAGCGCTGTCTAGGGGAGCCTGATGAGGAGCTGGCTAGTGCGTTCCCCGTCTTCATCCGGAATGCTGTCCTGGGCCAGAAACAGACCAAGAGGGTCAGGGCAGAGCCCTGCCGCAGCACAGATGCAGTAAGGATTGGCTTCGATGGACTTGGAGGCCGAACCAAATTCATCCAGCCTACCGACACAACTATGATCCGCCCACTGCCGGTTAAACCAAAGCCCAAGGCCAGGGCTAGGCAGAAACTGGGGGCCAGGACAGCGCCCACCCCCTCCCAGGCCACGCTGGACAATTTCCTGTGGCAGTGAAAACAGTGAGTCTCATCAGTGGCCAGATGCATGCCTCTGACTTAGGCCGAGGACTGGTGACTGGCTTGGCAGAGGGTTTGGCAGGCATGGCCCCTCTTCTAGGACCAGCCATGTGGACAAGGATAAATAAGAAGATGGGGGTGAAAGTGGGGCCCAGAAACCTACTTTTCCTGCACACACCCTGCCCCACCTCCATCATACTGGGTCTCCCTGTGGGGGCTGACGTGATCAGCTCAGTGTTCCTTCCAGCAGGGCTTGCCCCTTGTTCCAGACTTCCATTTATAGCCATGATCAGATGTAACTGGGCTACTTCTGGTCCTCAGACCAGGGTCTTTTGTTGACTGTAAGCACCAGTCTTGAGGCTTCTCAGGCCGCCTCGGCCCGCCCAGGCTTCTGCCTGCCTCTGACTTGCTGTTGGCATGGCCTGGGCCAGGCAGGGCAGGGGATGGGCAATGGTGGTAGGGAGAGGAGGGGGGAAATTTCTATGTGAAATAAAAAAGATGCAGTCTTTTTCTTCCTGGCTCTGGGAGGGTAAATTTGCACTCACTTCGAAAAACTGACTTGCATGATTTTCTAAAGGGGGGGACCTTCACCTAGACCCAGACCCAGAAATTCCACCCTTAGGCATGTGCCCTCTCAAAGAGCACAGGGAGACACTAACAAGAGCGATTTATCACCTAGCTTTGTCCACAGTCTGTAACCTGGGCACAGTGCAAGGCCATAAGCAGGAAAGCAAATGGGTGAACCAGGGTCTAGACACAGGGAACTCACAGCAAGCACAAGTGACCTGTGACGACAACCCCTTCTTCACCTTTCAACTCCACCAGCCAAGTTGCTAGTCTCCGCGGTTTGGCTTCAAGAGCACTTTCTTCCGGAAGACTTCTCTTTTAAGTCCTAACTTGGGTGAGGACTTGGGCTTCCCTAGTGGCTCAGCTGGTAAAGCATCTGCCTTGCAGGGCAGGAGACCCAGGTTCAATCCCTGGGTGAGGAAGATCCCTGGAGAAGGAAATGGCAGCCCACTCTAGTATCCTTGCCTGGAAAATCCCATGGACAGAGGAGTCTGGTGGGCTACAGTCCATGGGGTTGTAAAGAGTATCTGAGCATGTTAGGTGAGGACCCCTAAACTTCCCTTTCTCATTACTGGGTGAGTGTTCGCCTGTTTCTGCACATTTCAGCATGAACCTGGCATAAGAGAGATTGCTTCAGACTGAGAGTGCCCGTCTGCTCCCCTGCAGGTGCGTGGCAGCCTGGGGCTTCTTGGGGGGAAGTGATGCTCTTGATTATGGGAGTTGGACTCCTTTGGTGCTGCCTCGAGCCAAGGATGGTTAGGGAGTGGAAGTGCAGCATCAAATTAAGTGCAGTGGCTGGCTAATAGCTTTCTTATAGATCAGTAATCATAGAATTAAAAACCGAGAAACAAAAGAAAAAATAATAATATTAAAAACCCAGCAAAACCCAGCACCAAGAAAGAAGAAGAAAGGAAACAAAATATTTAGGTATAAATCTAACAAAATATGTACAAGATCTCTGTGAAGGTAAACTACAAAGCTCTAGGTCTATACATACAATGGAAGATTATTTAGGCTTTAAAAAAAAAATTCTGAAACATGCTACAGTGTAAGTGAATCTTGAAGACACTAAGCTACGTGAAATAATCCAGGGGCAATTCCATGTATATGCGATACCAAGAGTAGTCAGATTCACAGAGACAGAAGGTAGCATGGTTATTGCCAAGAATGGGAAGGAGGGAATGGAAAGTTATTGTCAAATGGGTTGTGAGTTCCAGTTTGAGAAGCTGAAATTCTGGACATGAATGGTGGTGTTGGTACAACAACATGCTTGTCTGTAATGCTACTGAACTGTGTATTTTAAAACATTAAATTTCATCTTATG EMBV3_12720 CAAAGCTCTGGCGTGGTCTTCCAGGCTGAGGGTTGCTCCTTTTCTACTGTCTTTATACTT Gene GeneID:534051|ITPKC:NM_001076011:679_cdna Constitutive 0 NULL GeneID:534051 18 GENE ITPKC MGC139070 inositol 1,4,5-trisphosphate 3-kinase C EMBV3_27495 GGACATGAGTTGAATCCCTGGTGTAGGAAGAGTCCACATGCCAAGGGCACCGAAGTCCAT Gene BVT0101_054642 + 0 NULL GK000003.2:14946171-15009726 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11976 GCAGCTCTGCTAAATCCTGGGGAATTCTTTGGGAGACAAGATCAAGAACCTTAGTTCAAA Gene BVV0102_291438 + 0 NULL GK000001.2:127229655-127257289 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26499 AATCCTGGGGGAAACAGAGACACCTGAGAGTTAACGGCAGAGAGGAGAAGAGGGTCAGTT Gene BVT0102_107071 + 1 EMBV3_05733 GK000028.2:30855936-31001625 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_19797 TGACTGTCATGGCTGCAGGGCATAAGACACTTCAGGTACCAAAACCCCCATCTCAGACTG Gene GeneID:527449|MAN2A2:XM_002696582:13_cdna Constitutive 0 NULL GeneID:527449 21 GENE MAN2A2 NULL mannosidase, alpha, class 2A, member 2 EMBV3_08671 GTCACAGGACACGGTTTAAAATAACTTTTCCCCTCTAGACCTAAAAGTTGAAATGAAAGG Gene GeneID:507639|PRPF18:NM_001075323:79_cdna Constitutive 2 NULL GeneID:507639 13 GENE PRPF18 NULL PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) EMBV3_40235 TCGAGTGCCACTGCCCGTCGGGCTGGAGCGGGTGGACGGCTTTGAGTGCGTGTGTCCGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40021 GTATAGTCAATTTCCTCCAAAAATCCACGAATGGGATAGTAGTACAAGGCTTTTCTGTGC Gene BVV0101_053587 + 1 EMBV3_15629 GK000003.2:111281052-111380890 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00174760 TCONS_00174759 1 XLOC_104680 NonCoding TCONS_00174760 XLOC_104680 NonCoding NonCoding - 3:111294376-111296628 - TSS129613 2252 3 TCONS_00174760_1 64 0.289520426287744 1 0 0.000273215187429947 0.000686508945020218 0.000420633374390913 0.000176321152659359 9.20787590089836e-05 0.000260496174000625 5.25912467753872e-05 2.22136608773364e-09 0.000185120632849456 0 3.55006703252493e-05 0 8.91423682014713e-06 3.55096631085413e-05 4.35175803907315e-05 1.12829890266825e-08 9.58392085652843e-05 0.00027853685921048 0.000140106720362156 0.000638323186713153 0.000338731389173818 0.000373278723794375 0.000411446116027983 7.55022136902042e-05 0.000119985242004425 0.000631159190934447 0.000446820348753248 8.53034882274863e-06 2.08264926128956e-09 0.000114798602269189 XM_005204944.1 LOC101907642 PREDICTED: Bos taurus transmembrane protein LOC653160-like (LOC101907642), mRNA. 8e-108 396 100.00 0.0968028419182948 NR_037869.1 LOC653160 Homo sapiens uncharacterized LOC653160 (LOC653160), non-coding RNA. 2e-109 401 69.19 0.41607460035524 0 noncoding GTGGTAAAACAGGGAGTGTTACAAAGTTGTTGATTGGTATGTAATTGGTACCCCATTTTTGGAGGCAATTTGGTGATGTGATTAAACAACTTGAGTGCACATACATACTCCTTGACACAGCAATTTCATTGCCAGGGATTTATTCTATAGATTTACAAGTATGCAAAGATTTGTGGACAGCGACACTCATTGCATCATTATTTATCACAGTAAAACAGTAGAAACAAATGCACATTAACAGGGGGACCAATTGAGTAAAATAAATACTTTGCTTTTATTCAAAAAATGAGGTTGATTGATATGTGCTGATATTAACAGATGTACAAGATATATTAAATGAGGAAAGCACAGAAAAGCCTTGTACTACTATCCCATTTGTGGATTTTTGGAGGAAATTGACTATACATGTATTTGTACTGAAATAGAAAACCTCTGGAAAGATATACACCACAAGAAACTGTGAACAGTGGTTACCACTGGGGGACCTTTATTTTCTATTTTGCATTTTTCTCTAGTACTTTGAATTTATTTTTATGAATGTGTATTACTTTTAAAATGCAAAAGAAAACATTTAAATAAGGAATAAAGGACCAATGAAAGGTAATTTATCAAAAATAAAAGAAGAAATTTCTCAAATTTACTATTAGAAGGCAAATTCAGTAATAGGACTGGAAGTCAGTATGACATGGTGGCTGATCGGTGAACTTGTCCTGACCCAGCTGACTTGGCAACGTGAATATGCTGCCCTCACTCATTAAACTCGAGACCCAAGCAGTCTTGCTATGGAGCCCCCAGTAACATGGCTGAAGAGAGGGAGAGGTTCCCTTTCCCACTTGAAGCCAACTGCTAAGTCATCAAGGCACAAGGAGAGAAAGAACCAGAGGCCAGAACCATTGGCAGGGATTTGCACCGACAGTCTCTCTGCTCAGCTGAAGCTGAAGGCAGCAAGTCTGGCCAATCCCTCTCCCAGGCAATAGCAGGATGGATATCCAGCTTGGTTATCACCAAGTCTTGGCCCTGGAATCTTGGCACATTGGAGGTGATGGACGAGTTGCAGATAACCAGCAACAGCAAAAGGAAGCAATCATCAGTACTCAGTCAGGAATGCATCTGGGTAATATAAGCTTAGAGAATCCCAGAAACACTTGAAGAAAATCTGAGACTGGAGTGTCTGAATGAGTCCTTGGGCATTTTAAGCTAATGATATTCACGTTTCATGCATTCATCTGACATACTGAAGTGTTACTACGTGCAAAGAACAGTAGCAAGCAGTAAATAAGGCAAACATGGAATTCATTAAGTTGAACTGGATAAAAATAAAACTGCCACTATTCAACCTTTCTGGGTCTAAAAAAATGGCACTTTCTTATGGATCAACATAAACACATTCTGAAAAGAGAAAGAACTACAGGCAGAAAAACCAAGAAAAAAAAAAAAAGAAAGAACTATCCAGTTAATTGATTGCAATTATGGAAAGACAAGGGAGCAATCATATCTAATCCAGTCTAGGGTAAGGCGTATGTGGTGCTGATCAAGAAAACTTCCACCTTTGAGGAGGTGATAATGAAAAGGAATTAATGAAGGAGACCGAGGGACATCATTCCTGGCAATCAATTCCAAAGGCCTTGAAGGGCAGGAAACTGGTCTGTTCCAGGGACTGATAATGTGACTCAACCCACGGGGACGCAGACGTGGTAGAGAAGAGGGAAGATGCAGATGAGAGGATGCGGAGAGTGAAGCTGGAGCCAGTCAGGCCTTGGAGGACCTTTTAAGGACTTTGGGGTTTATCCCAAGAGATTTTAAAAACAATGGCATACTATGCGTATCCAAACAATGGTAAAGTCTAGGGAACTTTCCGCTTACAAAGTTTTCCCCCTTTTGGCAGAGCCTGGAGGTCTACAGTTACAGGCGGCTAGTCTGTGGCTGTGTCAGAATTGGAATCCACGTCCTTGCAAAGAGCTTCCACCACCCAGGACTCGGCTGGGAGGGTGGCAAGGGTGAAGCAGGCAGTGGGCCAGGGACCCTTCTAGGAAGAAGCCAAGGAGGCCGAGTGCGCCCCAGGTGCCCCCACCCCCAGACGGCAGCTCAGCGCCCAGCAGTCCCGGCGGAAGCGGCGCACCGAGAAGCAGTAGATGAGAGGGTCCAGGCAGCTGTTGAGACTCAGCAACGCCAGGCTGAGGGTGTGCAGGACGTCGAGCGTGGAGGTGGCCCGGCATCCGCCGCCTTCGCGGCTCGCGGCGACCTCCTGCCCC TCONS_00171348 TCONS_00171349 TCONS_00171351 r 3' 12076 TCONS_00171348 TCONS_00171349 TCONS_00171351 r 3' 14327 EMBV3_26455 ACAGCTGCTTGCCTAGCCGGCACGCCCTGCGACCTGTGGCCTTCCTGACCTGCCTCGGCC Variant GeneID:614217|C9orf89:NM_001034753:108_cdna 534^593 1 EMBV3_28323 GeneID:614217 8 GENE C9orf89 NULL chromosome 9 open reading frame 89 EMBV3_08259 TAGTTAGGGGTTATCAAAAGTACTGTGTACCATCATACTATGCATTGTAGATATACAAAT Gene GeneID:529927|ANKRD34C:XM_002689369:33_cdna Constitutive 1 NULL GeneID:529927 7 GENE ANKRD34C NULL ankyrin repeat domain 34C EMBV3_14526 GTGAGCTGTGTCTTACTGTGAATTCTGTGCCTTTCACCCCATTCCAACTCTCCTCTTGGC Gene GeneID:505578|ZNHIT6:XM_002686285:136_cdna UTR3_Alt 2 NULL GeneID:505578 3 GENE ZNHIT6 C3H1ORF181 zinc finger, HIT type 6 EMBV3_29194 TGGGACGTGGAGAAACGTGAAGTCTGGGGCAGAAGTGCTCAACCTTTTCAGTTCTCACTT Gene BVV0102_122745 - 0 NULL GK000001.2:58811092-58847730 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00000764 TCONS_00000765 1 XLOC_000191 NonCoding TCONS_00000765 XLOC_000191 NonCoding NonCoding - 1:58837910-58847514 - TSS373 3193 1 TCONS_00000765_4 117 0.405261509552145 4 0.667916276163699 2.36233930632648e-136 5.40869635902841e-32 5.05377936710263e-06 1.79873956499738e-05 3.73227109362721e-11 2.48523021256904e-259 4.93443266628796e-156 1.54972999928687e-34 5.52635812976101e-05 8.88997009493428e-06 9.61697086674676e-35 2.72424906233824e-33 4.63863798209508e-28 1.79065002519403e-72 3.07309462607695e-06 0.000732253307496027 1.08095105889461e-42 0.000363680024309938 5.85425850164439e-05 1.3676522806201e-29 9.33341679686850e-17 0.000671309422142971 6.8106900492349e-46 0.000238946870093374 2.88832447482264e-11 2.37980676911087e-05 2.91965460890146e-17 3.69728870369546e-05 1.65276903098443e-07 4.26986301149011e-05 XR_232316.1 LOC101908760 PREDICTED: Bos taurus uncharacterized LOC101908760 (LOC101908760), 0.0 2073 100.00 0.359536486063263 NM_025146.2 NAA50 Homo sapiens N(alpha)-acetyltransferase 50, NatE catalytic subunit (NAA50), mRNA. 0.0 756 81.07 0.258377701221422 0 noncoding 0 0 0 0 0.144584936783698 0.370563200246749 0.0449627817961147 0.375349802967032 ACTTCTTTGTATCCTGTTCTCTGTTCTGCTTTTACACGTCTTTTGTAGGAGTTTGAAAGTGGAAAAACTAGAAAGAAAGAGCACACGGAAGGCTTTCAAGAACGATTAGAGAGATCCTCTTATCCTAGAGGGCAGGAAGGCGGGATGAAGCTCTGTAATAGAAGGCTTATTCAGTTTTTATATTTTGGCTGCCCCATAGGGCATGTGGGATCTTAGCTTCCCAACCAGGGATCAAACCCACATTCTCTCCACTGGCAGCACAGAAGTCTTAATCAATGGACCATCATTGGATTGGCAAGGGCTTTCAGAGCAGTACTATACAGAAGTGGACTGGCAATAATCCAGGAACCATGCTCTAAATTTGTCCAAGGAGCTACCTCAGATATGCAGATGACACCCTTATGGCAGAAAGCGAAGAGGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGGGAAAAAGTTGACTTAAAGCTCAATATTCAGAAAACTAAGATCATGGCATCCAGTCCCATCACTTCATGGCAAATAGATGGAGAAACAGTGGCAGACTTTATCTTTTGGGGCTCTAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAAAGATGCTTACTCCTTGGAAGAAAAGTTATTACCAACCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCAACAAAGGTTCATCTAGTCAAGGCTATGGTTTTTCCAGTAGTCACGTATGGATGTGAGAGTGGACCATAAAGCTGAGTGCCTAAGAACTGATGCTTTTGAACTATGGTGTTAGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGAGCCAAGCAGTCCATCCTAAAGGAAATCAGTCCTGAATATTCATTGGAAGGACTGATATTGAAGCCAAAACTCCAATACTTTGGCCACCTGATGCGAAGAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAGATTGAGAAAGGGACGAAAAAGGATGAGATGGTTGGATGACATCACCAAGTAAACTCCGGGATTTGATGATGGACAGGGAGGCCTGGTGTGCTGCAGTCCATGGCGTTGCAAAGAGTCAGACACAACCGAGCGACTGAACTGACATCAATGAAAGGCAGCTAACTTTCTCACAATGGAAGATGGTTAAGGAGAAAGTCATGAAAGTTTTATAGCAGCTTTTAGGTTGCTATAATAAAGTTCTCATCTTACCAGATTTTACTGTTCTGAATACTAATTATTTCAAGTTGTGTATTCAAATTTCACCTGCATAAGCAGTTTTACTTGTAGTACCTATTTTTAGTACAATAGTTTTTATTTCATTTTAGTATATGGATTACTAGTGACAAACATGATTCAAGATTGTTCAAATCTTTACAGAGAATTTTTGATATTGCCAATATGGTTTCTAAAAGATGAACTAGATGGGCTCAGAAGTTTGGTCAAGGCAACAAAAACATTAGTCATTTTCTTGACGCTACAGCTATTTAATGTAACGTGATTTAAATTATAATTGAAATTGGAAGTGCTAGTTGCTCGGTCGTATCCAACTCTTTGCAACCCCATAGACTGTAGCCACCAGGCTCCTGTCCATGGATTTCTTCAGGCAAGGTACTGGAGTGGGTTGCCACTTCCTTCTCCAAGGGATCTTCCCAACCCAGGGATGAAACCTGGGTGTCCTGCTTTGCACGCAGATGCTTTAAGGTCTGAGCTGCCAGGGAAGGGGAGAATTAATTTATACTTACATTCCTTTAAAAAGGATGTCTTGAGTTTTTGAAGACAGTAATAAGAATTAAAAACTTGGATAAAGTTCAGGTATGTGGAAGTTTTCAGCTTATCAGGAATATCTAATTCAAAGTTCACTAACACCAAATATCCCCACCCAATAGACTATTTTCCCAAATGCTGGGTTTAAGCTTCATCACAAATTAATATAAAACAGGCTGTATGTCTTTGACATTTAAATTCTAGGTAGTGATTGATTCATTTTAACTTTATGCTCCCAATGACTGATTTTAGATTTTTATCAAACTGCTTTAGAGAACTGAAAAGGTTGAGCACTTCTGCCCCAGACTTCACGTTTCTCCACGTCCCATCAAGGATCACTCGCTTTGGGGCCAAGTCCGCTGCCAGCTGTCATTCAGGAGGTGCTGTGGAGACACCCACATAGTAAGGAACTGAATCCCTCCAACAGCCACGTGAGTCAGCCATCTCCAAAGTAGCTTCTCCAGGCCTGGATGATAGTACTGTAACCCGATGAGACCTTAAGCCAGAATCGTTCAACTAAGCTGCCCTTGGATTCCTGACTCAGAAACTGTGGGTGATGATGCATGTTCATTGTTTGAAGCCACATTTTTAAAGAAAAAAATGTGAATATAAGTTATCTCTAGTCGATGAACACTGCTAATTAAATCACAGCCTAAAGTGTCTAGTGTTTAACAATTGCATTCAAAATATAGCAGCATTAAGACAGCCCTTTGGATCTTACTGTTTTCTCTCATTGGGACTGAACTGCAGATACTGAATAGTGTTTCTATTAAGTTCCAAAAGGTCTGAATTAGGAGGCCTTGATTACATTTGGCCTGTTTTAATTAAAGTTAGATCTTAAAGAAACGTAAAAGTACATAAAACAGTATGGGGAACAGTAGGCAATGACTACATATAGCTGCTGATCTCAGAATTCAACACAATGCATTTACATTTCTTTGACATTTACCAGACATCACAGATTTCTACCAGAACATCACATAAGTTTATTTCAGATGTAACAGCAATGTTAAAATCAACAAGTTTAAATCTTAACCGCACCAAGTAAACTTAGCTATTTAAGTATTTTTAAAGTTATTCCCTCCAAAAAACTGAGGGAGCTTTTCTTTTCCACCCCACATTCCACGGTTTCCCAATAGTTAGTTCTATTTTTGGAGGACTCCGAATTGACAAGTAAACTGCTTTGGGGATATTTCAGAACTTCTTTCCCCAAATGAAAACTAATCTGGACAAATTATATATTGCATAGATTTCTCTGCAGATTCTTTTCCTTAGAACCTAAACGTAATTACCATATAATTTTACCTATTTGCCCCACAGAAAAAAACTATCTTCCCCCAAAAATACGATGGGTACATCTTGTGATCTTCTAGTTAATAGAATTATTTTACCTCAATGATAATTATCGTATTTCAAAATAA TCONS_00003430 TCONS_00003431 TCONS_00003432 r 3' 217 TCONS_00003428 r 5' 423 EMBV3_42079 GACATCCACGTATGAACTAGGAAACCCTCCTGATTATCGGGGGCAGGCTTGCATGAAGAA Gene GeneID:786125|LOC786125:XM_002691207:25_cdna Constitutive 0 NULL GeneID:786125 11 GENE LOC786125 NULL similar to ACP1 protein EMBV3_03515 CCCAAACTTCACTCTGGAGGGACATGAGAAAGGTTCAGAAGATGGAACTGTGCGTATTTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35092 TAGACTTACAGTTCAGCTAACGGCACCGGAATCGACCCAGTAGTTCTCTGCACAGCTAAC Gene BVT0102_067631 + 0 NULL GK000004.2:100435790-100550304 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00185037 TCONS_00185036 1 XLOC_111485 Coding TCONS_00185037 XLOC_111485 Coding Coding MTPN 4:100547890-100626719 = TSS137648 3896 1 TCONS_00185037_1 118 4 0.950626680874816 0.00356117577417604 0.00209648385622598 0.00325546696066002 0.000724634344547752 0.000901246236420965 4.57175854286565e-07 2.02216249664172e-07 0.0011708369115771 5.45593425247749e-08 0.00236377257424357 0.00186609894956377 0.00174236508423958 0.00159965222672771 0.00454802927497633 0.00012900210020774 0.0334544398625253 0.0159882895366392 0.0463447771140456 0.000893750740245633 0.0006221201487887 0.000797395502442064 0.0176999467347835 0.0230473588171133 0.0302346214865316 1.35246061570045e-08 0.00186876807463328 1.05885930496967e-05 0.00235902967782017 0.00352599901014847 0.00011580068340157 NM_203362.2 MTPN Bos taurus myotrophin (MTPN), mRNA. 0.0 2394 99.92 0.341375770020534 NM_001128619.2 LUZP6 Homo sapiens leucine zipper protein 6 (LUZP6), mRNA. 0.0 4305 84.80 0.985112936344969 TCONS_00185037_1 sp|Q3T0F7|MTPN_BOVIN MTPN_BOVIN Myotrophin; 1e-82 241 100.00 0.991525423728814 5 coding 0 0 0 0 -1.21892566222016 0.00205932171406429 -0.0220062114665631 0.66002729076493 CTCAGTCACGGCGGCTCAGTCACTGCGTCTGCGCACGCGGAGCGCTCCGCCGCGCGCCTTCGGGGCGGGGTCCCGAGCAGGGCGTTCCGCCGCGGGGAAGAGGAAGAGGAAGTTGGGGGACGGTCCTAGCCGGGAGTGAACCGGAAGTGCAAGCTCTGCTGCTTCTCCTCGGCCAGGCGGAACCTACTCTGCTGGGCCCGGTGGCCGCAAAAAAAAAAAAACAACACTTTTCTTTCTCCCGCCCTAACGGTCGCCGCGGCCAACTGCCTCGCCCGCCTGGCCGCCTACCCCGCCTTCTCTTCTGTGCGGCTACCGCGCGGCCCTGTGTCCCTCTCGCCCGGCGGTATCCGCTTGCCGCTGCCACCGCCGCCTCGTCTTGCTGTCCGGCCAGCTGGCCCGCCCCGCTGCAGTGATGTGCGACAAGGAATTCATGTGGGCCCTGAAAAACGGAGACCTAGATGAGGTGAAAGACTATGTGGCCAAGGGAGAAGATGTCAACCGGACACTAGAAGGTGGAAGAAAGCCTCTTCATTATGCAGCAGATTGTGGACAGCTTGAAATCCTGGAATTTCTGCTGCTGAAAGGAGCAGATATCAATGCTCCAGATAAACATCATATCACACCTCTTCTGTCTGCCGTCTATGAAGGTCATGTTTCCTGCGTGAAATTGCTTCTGTCAAAGGGTGCCGATAAGACTGTGAAAGGTCCTGATGGACTGACTGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCCCTTCTTCAGTGATGGACGGATGGGCTAACAGCTCTGGAAGAATGACTCTCCTGTGGCCTCACACTGCTGCCTGTCTGTCTGTTACTCTCTATCTGCCAGCTTCTTCAGCTAAAATACTTTTAGAGGGGTGAGGGGAGAGAGAAATTCATAACAAATCAGACTACCAGGAACAAAATAAACAATGTTTGGGAGGAGAGGGAAAAAACAAGATCAGGCTTTTACTAGGATTCCTGATCAGGTCAGCCTCTTTTCCATTTCCAGTTTAAAAAAAAAAAAAACTGATACCCATGGGAGAGCAAAGACAAAACATACCGTTAATATTTGACCTTTTCAGCTCCCTGGCTAATTTATTAGATTGTGTTGAGGGTCTGATTATACCAAGGCCAACTATATATTTGGTAGCCCTATCTGTGTGAGCAGTAGTGGCTGCTGTGACGAAACTTAGGGTGCTGAGACAAGCAATTAGCTCTAGCCTTCTGCCTTAAGATGCACTCTAGTGGGGATTTCCCAGCGTAGTTACGAGCGCTGCCTGAGGTTGGTGACCAAATCTCCCCTGGTGACTTCCAGCTTTACATGAGAGCTCGGTTAAGGCGAGGGGGCGCACACTCCTCTGCTGCTGGACGGCTGGACTTTGGGTTTCCTCTCCCCCTTCACATGGATTTCATGTCTCTTTAGGTAAAACTGACTAGTTTTATTTATAAAATCTCAAATTTTGGAAGTCTAAAGGAGAAATCATTCCAGTCTGCTTTTTTTTTTCCCTTCCTCTAGATTCAGACATAGAACATTGAAACACTTTCCAACTCTCGCTGGTAGTAAAAGGGGATTTAAAAATAGAATCATAGCCATAAGCCTGTTAGATACAGAGAGAACAGTTGTCTTAGTACCTATGGATTTTCTTCATTTGCTGTTTGAATAGATTGGCCTCACTTCTGTTTGAAGAATCAAGGAACATTCTTTTGGAATGCCTCTCTCAGACCCACCTTGGATGCTGATTACTTACTGCACCAAAGCTCTCACTGGGGTGAGATTTACTGTTCGGACCAGTTTAACCCCATCTCTTAAAAATACGCATGTCACCAGGTTGCCCAGAGCTGTTGATAGGCTTCTGCTGAATGTATGCCAGCCCACCTGCCTAATATATTTTTGTTTCTTTTCTCTTTTATGCACTGCATAAAATGGGACACCTTCAAATTATATTCTGTATTTTTAAAAATACAGTGCCCTAAAATGGTGTTCTGACCTGCAGAAAATAGACACATTTTCTAATGTTTATTTCTTGAGCAGTACAGCTGATTAAAACATACATATACCCTTAAATTTGCTGTCCTGCATATAAAATAAGATTCATTTGACTTGCCATCCATATATGCTTACTAAAAATACTAGCATTTTTCCTTAGCCATGTCATGCAATAATTGAATGTACCTCAAATTTTTAAAAGTGGGGGGAGGGTGGGTTAGGGACTTGTATTCAGATTGTGGTTAATAAAGAATTAATGACAATTTTTTAAGGCCATGTAGCATCCTACAACAGGGTTAAACTAGTACCAAGAATAGTCAGCCTGGCCAATAACAAATCTTACCAGTTGCTGATTGGTTGGTTGATGTGTGGGTTTGTTTGTGTGTGTTTTTCCCTGGTGAACCCTTTTTTTATCCTGTGGCTTTTTCACTTAAAACTAGCCTAACCCTGGAATTTTCCTGCGTCCAAGAAAACAATCACAGAATACTGGTTTAAATACTTTGATACCTGTGGCTAATTCTGCTGTCTTGATGCAGGCTATTAGAGTTGGATTAGAAGTCAGTAATTAGTGCTTTATGCCATCACTGAACTGAAACACAGTGATCCTCGCTGAAGATGGAGGGCACTCTGTCAGCGTGTACTGTCAGCGTACAAGGTGTTCTGGTATCTTTGTTTTCGCTTCTTGGCATACTGCTGTTTAAAAGGCTCGACTTTTACTCTCTACACAGTTTTCACCTTTACTTTCCGAGTGTTTTCTGTAGTGGGCTACTGTAGAGAGTGTGCTGTTCTATCATTCCTAAACCTGGTCTGCTTCCTCCAGTCACTGGTCCAGAGACCATGTGACTCTTTGTACAGTTTATCCTGGTGTTCCCTGTAATGCAGTAGAGGCTACTTTGCCTTCCCTCTTCTTTCTCAGCCATTTTGTAAACCCCGTAATTATGAAGCGGTTGCTTGAGAAAATAACAGATAAACATAGAATAGACTGACCAAGATGGTTTAGAGTTTGTTTTTTTTTTTAACTAGGTTATTTATAATGTATTTCTGAACCACTTGGCAGAGAAATTTACAACACTTAATGTTCATATTTTGAGTAAAGAAAGCTAAAACCTTGTCTGCTTTTTTGGTACTACATGCATTAGTAAAAGGTTAAGTTTTGTTCTCCACTGCAGTAATATTTAACATCTCAGAAAAAAATCTTGCATGTTCTGTAGTTTTGTATTAAGTCAGTCTTTTCATATGCACTATTTCAAGTGAAAACAGGTGGTTTGCTTGTCTACATTAGTATCCTAACAGGTTCCCCCTGGCAGCTTCAGACTGGCGTCTGTAGACTTACAGTTCAGCTAACGGCACCGGAATCGACCCAGTAGTTCTCTGCACAGCTAACCTTCTAAACCCAGTGGGGCCTGAAGGAGAAGTAGGTGGATGCCATGGGTGGAAGCTGCCAGCAAGCAGGCCCTTCATTCATTGATTTCCTTCCCCCAAATAATGGATTTCAAATCTATATGTACCTATTTGATTTTTTTTCCCCTAAAACTTCAACTGAGCTGCTGTTTTCTTCCATGCAATATTGTATACTCGATTGTGTATAGAAGAAGCTGGTGAAGTGCCCTCCTACATAAGCAATTGCAGTGTTTGCATGCAAAATTCTAAAAAATTTAAATTGTCCTGATTCTATTTTGTAAATGGAGAAACAATCATATCTTTCTAAGCAGTAATGGAGGAAGACTAGTGCTTTGTGCATTTTGATATATTTGAGTTCATTTTTTCCACAGTGTAATACATTTGACACAGTTGGGGTTCTCATTATCCTAGTTCATGTACATCAGAATGCTAAATAATACTGTGTTTAAGTTTTGTGTTGCAAGAACAAATGGAATAAACTTGAATTGTGCTACAGCCA EMBV3_01509 CCTGACAGCATAGAAACAGCTGGACAGCCTAGAAACACATGCTAGAACATGAAGGAGAGG Gene BVT0102_281777 + 0 NULL GK000008.2:101976251-102051153 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228881 TCONS_00226455 TCONS_00228883 TCONS_00228878 TCONS_00228882 2 XLOC_138605 XLOC_138005 Coding TCONS_00228878 XLOC_138605 NonCoding NonCoding MUSK 8:101954000-102030832 x TSS170530 1119 3 TCONS_00228878_1 76 0.422698838248436 4 0.985487628691544 2.90031256516614e-08 0.000879016293042285 0.000642560946463843 3.36828170387568e-09 0.000294307832411595 6.09447802981805e-10 0.00124167137228734 0.000541264728173927 0.000339701130194351 0 0 0 2.44304303737673e-05 0 0 0 0 0 0.000680366810795609 0.000973457400638637 0.000335852636869298 0 0 0 0.00143975706652243 0.000338457151933862 0.000997189210158578 0 0 0 XR_231975.1 LOC101907488 PREDICTED: Bos taurus uncharacterized LOC101907488 (LOC101907488), 5e-94 349 100.00 0.171581769436997 XM_005251995.1 MUSK PREDICTED: Homo sapiens muscle, skeletal, receptor tyrosine kinase (MUSK), transcript variant X2, mRNA. 3e-59 233 90.53 0.150134048257373 0 noncoding 0 0 0 0 -0.0581811974156495 0.653265963953322 -0.0307780458864411 0.50930043184543 GGGGTCTACCAAACAGGAAGGCTTGGCTTTGGAGAAGCAATCTGAAAATTCATCCTCTGCAAATAGAATGAAAAGGAAGTTTCCAGACTCTGTGTATAAGCACTCAGAGTACTTTTGCTGATGAGCTATTTCAAGACCTTCGGCTGAACACTCAGAAAAAAGTACAAACATTAAAGATCCTGACAGCATAGAAACAGCTGGACAGCCTAGAAACACATGCTAGAACATGAAGGAGAGGGAAGAAGTGGTAGAAGGAAGTGTGGAAGCTTTAATTGCATCTTCCATAGTCCAGAGTCAATGGCAATAAAGAGTAGTTATGGTAAGAAGCACAAATACAGCAAAGCTGGACATGATAGAGATGATTACGGTCATAGAGTACGCAGGCGAGACAGAGAAGGAGGGCGAGGAGGAGGAAGGCGCATTTGGAATGTCCACACTTGGCTTTGAGGACGTCATTGGCGGGAATGCTGTGGCACAATGGTAAAGAATCCAGCTGCCAATGCAGGAGACTCAAGAGACACAGGTTCTATCCCTGGACTGGGAAGATCCACTGAAGTAGGAGATGGACACTTGCTCCAGTATTCTTTCCTGAAAAATTCCAGGCACAGAGGAGCCTTGTGGGCTACCGTCCACAGAGTAGAGTACAATCCAGAGTAGGACATCGCTGAGCAACTGAGTGCACACAACCATTCTGAATCTTGATTTCGTCATTTGTAAAATTAGGTTAAAATAGTTACCACACATCATAGAATTTTTATGAAAGTCAATTTATGCAAATAAAACATTGTAAATTTCAGAATGTTATAAGGTGTTACTTTCTTATCTGCAGGATAAAGCTATGAGGGAGAGTTCTGGAGTCAATGCTGTTTCTCTTTTCCAAGCCTAGCATTTACTTGATGTATGAGTCACTTATAGTCTCCAATTCGAAGTAACTCTCTTAATCTCTTTTCCATACAGTAGGGATAATAATAGTACCTATTTTATCGGGATGTCTCAAGGATAAATTTTTTAAATGTATGTAAAACTCTTAGCATAGTGCCTGATACATAGTAGGTACTCAATAGATACTAGCTATCTTCATCATCATCTTTTTGTGAAAGTATTTAAAGGATTGGAAAT TCONS_00226454 TCONS_00226455 r 3' 102 TCONS_00226455 TCONS_00226455 r 5' 0 EMBV3_23533 TAGCTAGAGAACTTTCTGGAACCATTAAAGAGATCCTGGGGACCGCCCAGTCTGTGGGCT Gene GeneID:783641|LOC783641:XR_084619:317_cdna Constitutive 0 NULL GeneID:783641 19 PSEUDO LOC783641 NULL similar to 60S ribosomal protein L12 EMBV3_34914 GCTATTACAGCAACCTCATGAATACTACAGGCGCTGTGACGCTCCTCGTTTGGCTCTTTG Gene GeneID:280907|PRPH2:NM_001166487:192_cdna Constitutive 0 NULL GeneID:280907 23 GENE PRPH2 RDS peripherin 2 (retinal degeneration, slow) EMBV3_09405 TCTGTCTCTCCCTGCTGGTGCTGTCCTGGGTGCTGACCATCTGCATTTCTTTGTTGCACA Gene GeneID:505191|LOC505191:XM_002695738:419_cdna Constitutive 0 NULL GeneID:505191 19 GENE LOC505191 NULL similar to olfactory receptor 397 EMBV3_16277 CCTCAGATATGTTTTGGAAAAGTCATAGTTTGGGAGAACACCAAAGGAAGCTAATCCAGG Gene GeneID:519982|RAB33B:NM_001083440:26_cdna UTR3_Alt 1 NULL GeneID:519982 17 GENE RAB33B MGC137827 RAB33B, member RAS oncogene family EMBV3_07969 ACGCGTAGCTGTCCAGTTTTCCCAGCACCGCTTATTGAAGAGACTGTGTTTCCTCTGTTG Gene BVT0102_208187 + 0 NULL GK000022.2:58873171-58989965 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00131767 1 XLOC_080472 Coding TCONS_00131767 XLOC_080472 Coding Coding - 22:58886657-58888261 - TSS98634 1604 2 TCONS_00131767_2 88 0.942643391521197 1 0 0 0.000156615261980827 0 5.1771577996041e-05 2.48611343665881e-05 0.000142725251225218 0 8.11245515194183e-05 8.85426350927782e-05 0 0 0 0 0 0 0 0 0 7.15304959917495e-05 0.000219688407611896 0 0 0 0 0 0.00018887476888363 0 0 0 0 XR_139187.2 LOC100337007 PREDICTED: Bos taurus zinc finger protein 347-like (LOC100337007), 2e-125 453 69.63 0.733167082294264 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-81 306 67.22 0.769326683291771 TCONS_00131767_2 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 5e-09 53.9 50.00 0.522727272727273 0 noncoding 0 0 0 0 -0.37070111137686 0.449282973426527 -0.0945100508736997 0.0945544547439557 AGGCAGGTTCTTTTTACTGCTCGGCCACCGAGGAAGCCCAGATAGACGTATATGTGTAACAGAATCAATTCGCTGTGCACTTGACATTAACACAACATTGTAAGTCGACTCTCCTCCAATAAAAGTAAAGGATTTAAAATATTCAGAGACTGTTACAGTGACCACACTGCTCAAGGCAATCTGCAGATCCAACGCAATCCCTATCAAAACACCAAGGGCACGTTTCACAGAATTCGGACAAATAATTTTAATATTTGTATAGAAACGCAGAAGACCCCAAGTGGCCAAAACAATCTGAGAAAGAAGAACAGAGCAGGAGGAATCACGCTTCTTGACTTCTGACTATATGCAAAGCTACAGTAATCAACGCTGTCTGGGACTGGCAGAGAAACAGATGCACAGATCAACACGACAGAACACACAGCCCGGAAATAAACCCACACACTTACGGCCAATCATCCCACAGCAAAGAGGGCAAGAACACACAACAGAGGAAACACAGTCTCTTCAATAAGCGGTGCTGGGAAAACTGGACAGCTACGCGTAAAAGAAGGAAATGAGCACATTTTTTCATACCATATACAAAAATAAACTCAAAATGGATTAAAAGGCTTAAATATAAGACCAAAACACATAAAACTCCTAGAAGAAAACATAGGCAGAACACTGTTCGATATAAATGGTAGCAACACTTTTTTTTGGATCTGTCTCCAAAGCAAAAAACAAACAAGGAATCAAATGGGACCTAATTAAATGTAAAAACTTTTGTATGGCAAAGAAAACCATCAGCAACATGAAAATACAATCTACTGAATGGGAGAAAATATTTGCAAATATGACTGATAAGGGGTTAATATCCAAAGTATATAAACAGCTTATACTGGAAACAGACAAAAAAACTGATCTAATTAAAAAACAAAAAACAAAAAACAGGCAGAAGACCTGAATAGACATTTTTCCAAAGAAAATATACAGATGGCCATCAGGCACACGAAAAGATGCTCAACATCATTAATCACCAGAGAAATGCAAATTCAAACCATAATGAGCCATCACCTCATATCTGTCAGAATGGCTATCATCCAAAAGACTGCAAATAGCAAATGTTGGTGAGGATGCAGGAAAACGGAGTCCTTGTATACTCTCGGCGAGAATGTAAATTGGTGCAGACACTGCAAAATAATACGGTGGTTTCTCAAAAAACTAAAAAACAGAACTACCATATGACCTAGCAACTCCACTTCTGGGTGTACATCTAACAAAAATGAAAACAGTAATTGAAAAAAGATACATGCACCCCAATGTTCATAGCAACACTATTTACAGTTGCCAAGATACGGAGCAACCTAAGCGTCCATGAACAGATGAACGGATAAAGAAGATATGGTACATATGTGTGCACACGCGCGCGCACACACACACACACACACACAGGAATACTGCTCAATCGTGAAAAGGAATGAAAGTTTGTCATTTGGAGCCACATGGACGGACTTGGAGGGCATCACCCTAAGTGAAATGAGTCAGAGACAAATAGTGTGTGATATCAGTTATACCTGGAATCTAAAAAGGACAGCTAGCGAGTATAACAAAAGGAAACAGAC TCONS_00127636 TCONS_00127638 TCONS_00127640 . 3' 12663 TCONS_00127636 TCONS_00127638 TCONS_00127640 . 3' 14266 EMBV3_21777 CTAGTTATTCCATAAATTTAATTTGAGTAGTTCTGAGCCTGCAACCTTTATGGTAGCATC Gene GeneID:510314|POMP:NM_001034376:82_cdna Constitutive 0 NULL GeneID:510314 12 GENE POMP MGC127942 proteasome maturation protein EMBV3_33733 CTGGATCTCAGCCAACCTCATCTCCATGGTCCACACTATCCTGATGTCCCACTTGTCCTT Gene GeneID:523992|LOC523992:XM_002688595:331_cdna Constitutive 0 NULL GeneID:523992 7 GENE LOC523992 NULL similar to olfactory receptor Olr1364 EMBV3_26172 CTCAGAGAAGGTGTCCCCCTCAGGAAACATCTCCAGCGCACCCAAGGAATTTTCTGTCTA Gene GeneID:537130|SUN3:NM_001076084:4_cdna Constitutive 0 NULL GeneID:537130 4 GENE SUN3 MGC151986 SUNC1 Sad1 and UNC84 domain containing 3 EMBV3_20986 GGATGTGCTGTACTGTTTGAAGTGACTGTACTGTGAAGAGAGGACACGACTAGGTCTGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09114 GAGGACCAGGATTCAAGCGGGTTTCGTGAGAATAAACTACTGGGGCTTTCTTCCATTTAA Gene GeneID:509530|BOLA1:NM_001034352:73_cdna Constitutive 1 NULL GeneID:509530 3 GENE BOLA1 MGC127113 bolA homolog 1 (E. coli) EMBV3_01648 GAAGTCCTGCTCATGGTTTCTCTCCTAAGCCACAAATCTTGCCAACACCAAGTTCCTCGG Gene GeneID:510499|SLC15A4:NM_001101927:105_cdna Constitutive 0 NULL GeneID:510499 17 GENE SLC15A4 MGC159855 solute carrier family 15, member 4 EMBV3_16965 TAGGCAACGAATAGGGATACGTGGGGGAAGTACTGAACGAAAAAGCCCGGCTCTCACAGA Gene GeneID:509264|PHF17:NM_001015559:14_cdna UTR3_Alt 2 NULL GeneID:509264 17 GENE PHF17 JADE1 PHD finger protein 17 EMBV3_23202 CCTGTATCCATTCTCCTCCAAACTCCCCTCTTATCCAGACTGCCATATAACACTGAGCAG Gene BVT0102_107975 + 0 NULL GK000030.2:4785666-4846777 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18467 AGCTGACATAAGAGCACCTCTGTGATATGCTGTCCAGGAGCCGGAAGCCCAGGGAATTCT Gene BVT0102_207973 - 1 EMBV3_09718 GK000020.2:55751132-55752613 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00117770 1 XLOC_071936 NonCoding TCONS_00117770 XLOC_071936 NonCoding NonCoding - 20:55746438-55753795 - TSS88238 7357 3 TCONS_00117770_4 171 0.147886366725567 1 0 0.000340280620870185 4.09750885647253e-06 0.000132074140422062 9.93292553596123e-05 0.000426138914981717 0.000229005536656263 4.37292540772603e-05 0.00047192328268325 0.000138026464097892 0.000992209715671831 0.000772229683088993 0.000679770705344596 0.000202413641536104 0.00131138634636866 0.000609953738434724 0.00022916146056067 6.31867407992895e-05 4.43362645860426e-05 0 9.7749529701495e-07 0 0.000322770088709572 0.000108487438157681 0.00049790382481634 0 1.43648313265202e-05 0 0.000291145378446999 0.000110857031972931 0.00017202353659316 NM_001105359.1 CWC25 Bos taurus CWC25 spliceosome-associated protein homolog (S. cerevisiae) (CWC25), mRNA. 0.0 1130 91.76 0.107108875900503 NM_005643.3 TAF11 Homo sapiens TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa (TAF11), transcript variant 1, mRNA. 1e-67 264 72.84 0.0622536359929319 0 noncoding 0 0 0 0 -0.00523189079457831 0.981079852636622 0.00747779100428825 0.873132789615132 GGACACATAGGGAGGAAAAAATTTATTTGGTGAGAAGACCAGGAATTGAGCTTCGGACACATGGATATTGAGGTACCTTTTTGACAAGCAGACGTGATTATTAGATAAGAGTTTTTGATGTGCTAGTCTAGATCACAGAGAAGAAATCAAATCAGGTTAAGACATCCTGGCTTGTTAGCCAGTTAATATCCAAGCTGGACCTCACCCATCTCCCACTAGAGCCTACATGATCTCAAGCTATGTCATGAGTTCTCTTGACCCTTTTATTTTCTTCCTAGGTGATTTCGCCCCTTCTCCTGGATTTAAAATTTTATCTTTATAAACATAATCCTAAATTTCATACTTAAACTTGATTTCTCCTCTGGGCACCAGAATCTGAAGAGAGTAATACTAATAGAATTCTGAAATACACTGAGGAGACTAAAAACATTCTAGGAACTTGATTGGGAATTTTAAGTCAACGAGGAAAGCAAAAACCAAGATAACAAAAATAATGATAGATTATGTGCATTATAAATCATTTATATACTTCTAAGTTGTGACAAATATCATGCAAAAAAAATTAAAATAAGGATAACAAGTGGAAGCCCACAGTTTTTAAGTAGGTCAGAGGTGTAAGGAAGGTCTTTCTGAATTGAACTTAATCTGGGAAATGAGAGGAAGCAGATTTCCAAGCATGATTATGTGTGGACAAAGGCAAGAAAGAAGAGTCAGGTGAAATAAACTTTTCAGACAGAAATGCAGCATATATGAATGCTTCAAAGTGAGAAGACTCCTGAGACTGAAAAAATGCCTGCATTTGAGGGAACTGTAGCAGATGACAGAGGTTGGAGAGGTTGTTAAGGCTGAAATAACGAGGTTCATCCAAGCTCATCACCTCTTGTTGTTGTTCAATTGCCCGGTCATGTTTCTTTGCAACCCCATGGACTGCAGCACACCAGGCCCTCCTGTCCCTCACCATCTCCTGAAGCTTTCCCAAGTTAATGTCCATTGCATCAGTGATGCCATCCAGTCTTCTCATCCTCTGATGCCCTCTTCTCCTTCTGCCTTCAATCTTTCCTAGCATCAGGGTCTTTTCCAATGAGTGGATTGTTTCCATCAGGTGATGAAAATACTGGAGCTTCAGCAGCAGTTCCTCCAATGAGTATTCAGGGTTGGTTTCCCTTAAAATTGACTGGTTTGACCACTCCCACACACTATGCTATGACTATATATGCTCTCTTTCTCTTTACTGGAACATTCTTTTGTATTATCTCCCCTTTCTCTACCTTTCAGTCTTTGACTCTTCTGACTTCACCCACAAAATCAAATATGCAATTTATCTTTTACATGCTACTTGAATATAGTAAATCATTATTTAACCATATTTTATTTATATTGTATTCTCAGTGCTTCAGTTCAGTTCAGTTCAGTTGCTCAGTCATGTCCGACTCTTTGCCACCCCATGAATCACAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCACATCCATCAAGTCAGTGATGCCATCCAGTCATCTCATCCTCTGTTGTCCACTTCTCCTCCTGCCCCCAATGCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCACATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGATTGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCCCCAACACCACAATTCAAAAGCATCAATTCTTCAGCGCCCAGCTTTCCTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGACAGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTCAATATGCCATCTAGGTTGGTCATAACCTTTCTTGCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGTCCCAAAAAATAAAGTCTGACACTGTTTCCACTGTTTTTCTATTTCCCATGAAGTGATGGGATCAGATGCCATGATCTTCCTCTTCTGAATGTTGAGCTTTAAGCCAACGTTTTCATTCTCCACTTTCACTTTCATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAAGTTATTAGTCTTGGCAAATAATCAACAGATGTTTATTCAAATAAGGACAGATTTGTAGGCAAGAGATAAATATTAATGGTCTAAAACATTTGTTTGAGTAGATGCAAGCTGTATGGATTACATCAGAAAATAATAATAATAATCAACTTCATGTTTTAAAATCTGCACAAAAGGAATTTGGTAATTTGCACTTCCAGAGCTAAAAGAAATATGTACTTTTTCTTGGCCACTATATTAAGGAAGATAGTGACTCTTCATGCCAGTCTCAGTCTTTGAAACACCAGTATAAAGGTCTTTCCTTGCTCCCATTGAGTCTGCTTTCTATTCCCTATATCATATACTCATTCATATCTCTTTATTATTTGGATTATATTCAGCAAATAGGTAGAACTAATGTGGTAGCACAAATGTTGCAGAGAAAAAAAGCAAAGCCCAGTTCAGTTCAACTGCCTCCTCCATCCAAGGCAAACTATGTGAAAAGCCATGGTTCTGAGCACCATTCAGTTCCAACTAAGCACTAACGTTAGAGGACTTTCTACTGTTCTATATTATATTGTACTTCCATGAGGAAAAATAGAGCTACAAAGTGTCTTCACCATCTAAAACAAGACTCTCTACATAGGTCATTTTCCATGCAACTCAGAAAAAGATGAGAGCACAATAATTCTGATGAAATGGTCATGCAGGCAACCATGAAAAAGGATTGTTCAGGCTGTGAACATGACTAACATGCAAGTTTGCCAGGGACAGCAATGGGGTGTCTGCAACCACAGACTGGTTTAGTTACCTTTGAACGTTTGCCTTTGGAGCTTAACAAGCAGATCTCACCTTGACCAGACGACTCATTTCCTCCGAGGGCCCACACTACTTGTCTCCTAAAACCCGGTCAGGACATACCACTCCCTGGTTTAATGATCTTTCTTCCTGATGCCCCAGGATGCATCAGGTAACAAATGATTCCAAAATTTGGAACATTCTAGCACCGAACCTAGGTGTGCTCATAGTTTCTCCTGTGAGCACACACACTGTTTCATTCTTTGGGCAAACTAAAGGTTACTGGGTATGGAAATTGCCTCAGGGATGGATGAGAAGTGGGAGACATGGGTGGAATGAAAGCCTGAGGGTTAAGAGGCTGGTGAGCCAGGGGCCTGGTTCCTCGGAAATAGGCCCTTCCGGACTCAGGCCTAGAAGAAGAGGACCTTCTTGTGCTTGGTGCTGGGCATCTGCATCTTTTCGCCGAGCCTGCGGCTCCCTCAGATGCTTGGGTTGGAGTGGGGGCGTCTTGCTTCACTTCTCAAACAGGAACAGGGCCTCTTCCACCACCTCCCTGATGAAGACCTTGGCCATTCCGGACATGGCTATGATTAAAATCGGGACACCGGCGTGCCAGCCACTGCCTGGTTCAGATGTTGGATAGTGGCCTTGGGGAAGCCTGAGCGGCAACACACTTCGTAACAGTTCAGCTGCTCCCTCATAACAAACACGACAGTTCTCATCTTCTGGGCCTCCTCTTCGTCCACTTCCCATTGCCTGGCTTTCTTGCCCTCAGTGTCCACTTTTTGTCTCTTGGCCGCAGAGGACATGAGGAGGAGTCCGCCTTTTCACCTGCTCTTGGCTGCGGGTAGTCCTGACGCCTGAGCTCCCCACCTTCTTCGTCAGAAGACTCCCTGGCTTCCTGGGTTGAGTCCTGCAGCAGGATACGGTCTGGGTAGCTGGGGTCCGAGCCTGGGGGTACGCCTGGTTCTTCCCAGACACACTGGCCTTCTCCATCCCAGCGCTGGTACCAAGTCCCCTAGCTCAGAAAGCTCTGGCTCTGGGTCCTCCCTGAGGCAAAATCAGTGGGAAAGAAACACCCTCAGCCTCAGCATCCGCAAAAGAAGGATCCGCCTAAGACATGCCTGGGCCCAGCCCCTGTATATGAGGGTCTGGGGCCCTGAAGCCACGCCTGCCTGAAAGTCGGCTAAACTCCTCAGCCAACCCTGCACAGTGGGGGAATAGGCCCCTCCCACTGCCCCAGGCAAGGGGCGGAGCCGGGGTGTACCGCCCTGGGCGGCAGGGGGCCAGCCCCAGCAGTCTGCCAAGTTTCTGAACCCTTCAACTTAGGCCACGATGGAAATCTAGACGTGTCCTCAGAAGACCTGTCTCTCAAAGCTGCCTTTTGAAAGCTTTCCAGCAGGCAGCCCAAAAGCCCAAATCCTCTCTCCGCTGCTCCTCAGAACAGGCTGGCTGTCTTGTGGGGTGATGGCTAATCCAGAAAGCCCAGAGAGTTCACTACTCTGGGAGACTTTCTTGCCACTTCAGGGTGGCCCCAGACCATCCTCTCCCGCAAGGCACAGGCATGAAAATAGGTCGGCGGGCCTACTCTCCTCCTGCCTCTCCACCTGCTCTCTGCTCTGCGTGGTCCACCCTTCCTCCGTCTGAATCCCTGGCCTCGGTAGAGGTTTTCAGGGTCACCAGGGCTTAAGTCTCTCCCCAGTGTCCCTATCCTGCGACGGCTGAGATCTGTGGCCATTTCCCCGTTGGTTCTTTTCCCGTGGTAAGTATGCCTTTGGAGTTCAACCCGCCCTTCCGGACTTGGCCTGATTACTCACTTCCTTTGAGGGCGGACGGTACTAGTCCTGCTTAAGCAGTTGCCACACATGATCCATTCACCTTTCATCCCCATCCCTTGGAGGGGCGTTTGGTTGCTGCTGACTTCCAGCACTTTGGAAAGCAGATTCGAGGTAGGAGTCCTGTATGCACAGCATGCCCTGTGGGCCCACACCCCATTTGAGAGAAACTCAGGGTAGAAGGGTCCCCATGGGAATGAAGAGGCCAGGGGAATGAAGGTCCATGGGGCCCTGACTTTCTGATCAGCCATCCCCCAAAGACAGGAGGCTTTCTTCCAGATCTGAACTCCTGGACTCCGTCTCTTGACTTGAAATGACCTGGGGCATGAGGTAGGCCCTCCGGCCCAATGGAGCAACCGCGTGTGGACAGGACAGAGGCTTGCCTCTTCCTGGATCTACCTGGGAGCGCTTCACTGCTTCCTCACCTTTCTGGTACAAGGCTCTTAGCTCTGGTTCTTTGCAAGAGGGTCCTGATCCAGTCGCCTGGCCCCACCTGCCCAAATGTGATCAGGAGTTGGTGAGTGGGTGACTTGGTCAAAGGCTGGGATCTCACCCCGACCCTCACTCCCACCTTCACCCCACCCATGGAAGGATTCTGTGAGGTTTCCTTCCGGGACCGCGGATGGCTCGGGGATCCCATCCCCTGGCCTTTGAAGGCCGAGCCAGCCCCAGGCGCCTGGGAAACAACCCATTACTTCCAGAGGCCTAGGCTTCGTCTTGCCCACGGCCAGACGTGGTTGGCTGAAAGGCACTGAAGCGCACTGGCGTCTCTCCGCGTGAGAGATCGTCGTCTGGTGTCCTCCGGGAAGGCCTTGCCTCTGCCGAGGAACACCAAGGCTTCACTCCCGTAGTGACTTTGAAAGAATTCCCTGGGCTTCCGGCTCCTGGACAGCATATCACAGAGGTGCTCTTATGTCAGCTGGATGGCTTTGCTAGAATTCCCTAAGTGAATCCACCAGAGCCTGGTGTTCCCGATCAGGCGTGGTTACAGTGTATGGATTCAGCTTCTCCGGTAGACAGGCAGGCGCCATTTCAGGGGTCTGTTCTCACAGGTGAGTTCTGGCAGGTCGTGTCTCTCAAAGAATTAGACTCTGGGTCTCGGGTCTCTCCCCAATATGCCTCCGGGTGAGAGATGTTTCTGCGTGTTACTGGTCTTTTCAAAGGAATAGCTCAAGTTGTGCTGGATGTCTTCTCTCCCCTTTGAGGCAGTTGATCCATCCTGGTTATGTCCCATCCTGGTGGCAATGTCCACGGGATGCAGGAGCTGCCTCGGAGATGGGGCAGGGGTGCCGTATGGGGAACACAGTGAAATAAAGCCTGAGGGTTAAGAGGCTGGTCAGCCGGAGGGCCAGGTTGCTCAGGAACAGGCCCTTCCGGGCTCAGGTCTAGAAGAAGAGGATCTTGTGCTTAGTGCTGGGCATCTGCCCCTTTTCGCGTAGCCTGCGAACAGCCTCCCTCAGATGCTTGGGTTGGAGTGGGGGCTTCTCGCCCCACTTCTCACACACGTCTAAGGCCTCTTCCACCACCTCCCCGACGAAGACCTTGGCCATTCCAGACATGGCAATGACCACGTTCTGGGATACCGGCGTGCCGGCCACGGCCTGGATCAGATGTTTGATGGTGGATTTGGGGAAGGCTGAGCGGCGAAACACTTCGTAACGGTTCAGCTGCTCCTTGCTCATAGCAGCCACGAGGGTTCTCATCTTCTGGGCCTCCTCTTCACCCACTTCCCGTTGCCTGCCTCTCTTGCCCTCGGTGTCCACTTTCCGTCTCTTGGCCACAGGGGAACGTGAGGAAGAGTCCGCCTCTTCACCTGCCCTTGGCTGTGGGCAGTCCTGATGCACCAGCTCACCGCCTTCCTCGTCAGAGGCTTTCCTGGCGTTCTGGGCTGGGTCCCGCGGCAAGATTCGGCCTGGGTTGCTGGGTTCCGGTCCCAGTGGCACGCCTGGTGCCTCCCGCGACACATCCAAGTTCGGACCTTGGTCCGGGAGCCACGCCCTGGCCTTGTCCATCCCGGCGCTGGGTCAAAGACCTTAGCTCAGAAAGCTAGAGCCCTGTGCCCTTCCTGATGCAGAGTCCGAGGCAGAGAAACACACTCAGCAGCAATCCCCTCAGAGGCAGGATCCGCCTGAAAGGGGCCTGGGACCAGCCCCTTTATATAAGGCTAGGCCTGAAGCCACGCCCACCCGGAAGTCAGATGAAGGCTCAGTATCCCCCGCGCAGCGGAGGGGGGGGGGGGGAGGCTCCTCCTACTGCCCCAGGCAAGGGGCGGGGCCAAGGTCTACCTCCCAGGGCCGCATGCTGGGGCAGACTGCTGGCAGTCTCGCAGGATTCTTCCTGCCTCAGTTTCTGAACCGTTCATCTTGAGCCACAATGGAAATGTAGACATGTCCTCAGAAGACCTGTTCTCTCAAAGCTGCCTTTTGAAAGCCTTCCAGGAGCCAGCCCAAGAGCCCAAGTCCTCTCTCCGCTGCTCCTCAGAACAGGCTGGCTGTCTTGTGGGGTGATGGCTAATCCAGAAAGCCCAGAGAGTTCACTACTCTGGGAGACTTTCTTGCCATTTCAGG TCONS_00114046 . 3' 134230 TCONS_00114046 . 3' 141586 EMBV3_25197 CACATGGACAGTGAGAGCCTGTTCAAGGACGGGAAGCTGCTGCCTGCCATCACTATACTA Gene GeneID:504889|GMPPA:XM_002685583:184_cdna Constitutive 1 NULL GeneID:504889 2 GENE GMPPA NULL GDP-mannose pyrophosphorylase A EMBV3_08034 CAGTGGTAGAAACAGAACTTAAAATGGGCCTTGTTGGCTGGAAAGGTTTTGGATGGGTCC Gene BVV0102_061130 - 1 EMBV3_13965 GK000005.2:51209165-51220564 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42048 CTTGCCAGGTGCTTGCGTGTCTACAAGTATCTCACATGTTCATAGCTTCAGGGAAGAGGG Gene GeneID:531420|GP2:NM_001075950:353_cdna Constitutive 0 NULL GeneID:531420 25 GENE GP2 MGC151889 glycoprotein 2 (zymogen granule membrane) EMBV3_00414 TGGACGAGAAGATCTTCTGTTGCCATGGAGATCCTCAAGCCCGCTGACAAGAACAAGGGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10108 TCATCTGACAAATCGAGGACGATACCTACCTCACAGGGTTGGCGTGAGGATGCTGTGGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06441 GTTTCATGTAAAGCAATCCCTGTAGACTCCGATGGACCTCCAAGCGTGGACCACAGCCTT Gene BVV0102_063913 - 1 EMBV3_32912 GK000028.2:42305206-42317554 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162705 1 XLOC_099586 NonCoding TCONS_00162705 XLOC_099586 NonCoding NonCoding - 28:42314712-42315396 - TSS122037 684 1 TCONS_00162705_2 86 0.299707602339181 1 0 0 0 0 0 0 0 0 0 0 0 6.69354028442411e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00021292120641804 0 XM_005225041.1 GPR146 PREDICTED: Bos taurus G protein-coupled receptor 146 (GPR146), 2e-21 107 86.81 0.131578947368421 0 noncoding TTAGCTGGAAGACATATGGGATCTTAGCTCTCCAACCACGGATGTTACCTGAACCTCTGCATTTGGAAGGCGAAATGTGAACCTCTGGACCTCCAAGGATGTCCCAGGAGCTTCAGTCTTGACACAGGATGGAAAAGAGGTTGACTTTGGCCACTTTTTTCCCCACTGGAAGCAAGCAGGCAAACTGCAAACCCTGGCTAGGAACGCGAAAAGGAGAGCGCACAGAAAGAGAGCAGGGCAGAGTGGACACGTGCGCAGATGGCGCAGTGCAGCGCGCCTGGCGGGGTAGAGCTCCTGTCCAACAGCCCGCCCTCCTCTGTCTGCATCCTGGTGCACGAGGAGCTCCGGGGCGCAGAAAGAGGGTGGGAGGCCTGCTGTTAAGGCCATAGCTTTGCCAGGTGTGCATGCTCCCTCATGGGTGCTTGCGCTTCTACTTGGGTGTTGGTGGAGGAGGTCTGCGGCTGGCCCTGGTTGGGTCTTGGGAGAAGCTCAAGGCTGTGGTCCACGCTTGGAGGCCCATCGGAGTCTACAGGGATTGCTTTACATGAAACCAAGGGACATTCAGAAAATGTGCGTATTTAGACTTTACTGGTGGTCCAGAGATTGAGACTCTGTGCTTCTAATGCAGGGGGTATGAGTTTAATCCTTGGTTGGGGAACTAAGATACCACATGCCATGTGGTGT TCONS_00160779 . 3' 2159 TCONS_00160779 . 3' 2842 EMBV3_17274 ATCCAGTGTGGCCCAGCAAGTAACTCAAGTCCAGACAGTGGTATCCAGTCAAGTCGGGCA Gene GeneID:786808|LOC786808:XM_002690611:114_cdna Constitutive 0 NULL GeneID:786808 10 GENE LOC786808 NULL similar to TRD@ protein EMBV3_22025 CGGAGAGAGGGCTCGGCCGCCGGCCCGGAGTGGTCTGATTCCACCAAGAGAAGGCCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10723 TCTCCGAGGGAAGCCCTACAGAAAGTCTAAAAGGAATCAATTGCTAAGCCGTCCTTGCTC Gene BVT0102_138407 + 0 NULL GK000010.2:101309244-101328881 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023529 1 XLOC_014196 NonCoding TCONS_00023529 XLOC_014196 NonCoding NonCoding - 10:101311016-101313491 - TSS17419 2475 1 TCONS_00023529_3 147 0.16040404040404 1 0 0 0 1.86949543922799e-05 0 0 1.4452745227865e-06 4.71249200851561e-06 0 0 0.000163748875554736 4.62461395237728e-06 8.66832611960954e-06 6.26026383204074e-05 5.70181185711848e-06 4.82596360252539e-06 0.000885722387340019 0.000778125803629276 8.11019048859921e-05 0 0 0 0.000985140374982981 0.000240933788569651 0.000616397803053397 0 9.96329527276501e-06 0 0.000178520222772403 0.000127494545305356 6.80173715876649e-05 XM_005224039.1 RTTN PREDICTED: Bos taurus rotatin (RTTN), transcript variant X1, mRNA. 1e-106 392 89.76 0.11030303030303 0 noncoding 0 0 0 0 -0.814853210315859 0.001554462249711 -0.0833845418061667 0.168492088849669 CCAGTGGGCCTTGTGGAGACGTCTAGTGAAAGTCTCTCAGTCGTGTCCGACTCTTTGCGACCCCGTGGACTGTACATGGATTCTCCAGGCCACAGTACTGGAGTGGGTGGCCGTTCCTTCTCCCAGGGACTGAACCCAGGTCTCCCGCCTTGCAGGCGGATTCTTTACCAGCTGAGCCAGCAGGGAAGCCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCGTCGCTTCAGTCATGTCCGACTCTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCAGAAAAGTGAAAGTGAAGTCGCTCAGACTCTCGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCGTCCAAGGGATTTTCCAGGCAAGAGTACTGGAGTGGGATGCCATTGCCTTCTCCGAGGGAAGCCCTACAGAAAGTCTAAAAGGAATCAATTGCTAAGCCGTCCTTGCTCTTAAGCAGATTACAAGCATGCTATAATTACATACATGGCTGTATCTCTAATAAGGACCCAACCACGACTTTCTGCTCTTGTTGTCTGGGTTTGGGTTTTGTTTGTTTGAGCTCTCCACAGATAGCCAGAAAAATAAAAGTTAAAAACAGGAAATAGAGGGAAAAGGCCAGAAGAAGAAAGAAAACTAGAAGTGCATAAGCCACTGTGTTAATTTAACAGCATTTGCTGTGTACCTCTGGAAGGTAAAAGAACCTTATTAAGAAGGGAATAGAAAATAGATATTATGAAAAGACATGGGCTCCACCTGCAGTTTTCAGTGCTCTTGTTTGTGTCAGGGTATAAACCAAATAGCTCGTTGAGACAAAATGAAAAGTAAAAAAAAAAAAAAAAAAATCAAGAAGTGAGAACTTGAAATAATAAGCTTTCAGCTAGAAAAATGCCTATGAGCCATGCATGTATAAATTTTAAAAGATTATAGATACCCTTATAGATAGATATGCTAAATACCCTATCAAGAGATAAGGTAATGAATTTAAATTTTACATACAAATTATGGTAACTGGAAACAGAACAGTTAAGTTGTACAGAGGAAAGATGAAAATTTGTGTTGGGGATGTTCAAACATAGTATTCACTTCACTGCAAATATAGAATTACGCCTTGAAGGCAATAGATATTACATTATATAATTATCAATTTAAGCTCTGATGAAGCAGAGTAAAACTTTGCTGTCCCTGAGTTTGAAATATTTTATTGCATCAAGGATAAAGACAAGCCAACGTTTTCTCTTTTTTATTTTGGTAGATGTTATATAAAAAGTAATTGAAAAAGTGGAAGGGTATGTGTGTGTGAAACAATTTACACAATTTTCAGTTATGTACAGTATTTGCTACCAAATATTGTCATAAAGTTACAAATGTTTGAATAGAGGAGTAGAAATTGAAGATGCTTTGGGGGGGTGTCTGTTTCAGGTGTAAAATAATATGAAATAATTTGAAAGGTAGCTGCGTCTGGAAGTCTTAACTGATTACTAAATAGACATTCATAATTAGCTTTTGCAGGAAAATACACTAAGATCTTTTGTTTCTCTACAAGATCACTTTGTTTTGAAATTTAAAAAATAGGTATATATTAATCATGTTCAAGTATTCAAAAGGTAGACTGAGGTATTTATTCATTTTAATGTTTTTACATCCCCTCTCAGAGGCTTCTCAAATACACTTTTAAATTCTGAATCCTGTAGTTTTCTGCTTTGTTGCTAGAGTCCTCATTACGTGTAATTTTACTAATGATGCTTTCAAATAAAATAATCTCTAAAAGTGTATTATTCTTAGAATAATGAATAGATATATAGCATTAAATCCAACGCATATTTGTCCTGAACACATTTATGCGTAAAACTCGAGAATAAAATGGGCTGGAAACAACAGACAACTACTTTCAGAATAAAATTCCTATCATATCCCAAAGTTAAAAAAAAAAAAATCTGTCAGCAACCCTTAGGCATACAGCGGTTGTCACCTGGCGCACACGGAGTATTTTGAACCCGTTTGCGAGCATACGCTATTATAAGGCTTTCTCAGCAAAAAAGAAAATAAGACGGGCATGCCAAAAGCGGCCAGTCTAATCAGGATTTGCAGAAATCACAAGTCGGAATTTGCAGACCCAAGAATTCTTCCTTCCAGAGTAAACACTCTTTACTCCAAAAGCAAAACAAGCCATCACCACGAAACAGTCCTTCGTTCCTCTCCTTCTCGCCAAAGTTATCTGGCAAATCTCGCACTTAATATTCCGAGAGGCACAAACATACCTAAGACTTTTAAAGCCCCGATGCAGAATTAAGCCGCTCACAATCAACCGAGGAGCTCCGAATACAAGTTCAAGACCCCTCTGCAAATGCCTCAAGTGGAAGAGAGCCTGGAAGAGTTTTCTCTTTGTTACGCTCGTCCGTGCCTCGGGTC TCONS_00018515 . 5' 691 TCONS_00018515 . 5' 691 EMBV3_17950 GCTGGCCGCATACCGGAAAGCACATTGCCAGTGTTTGAAAAGCTATTTGTACTTCCGTGC Gene GeneID:767977|BRP44L:NM_001077042:23_cdna Constitutive 1 NULL GeneID:767977 9 GENE BRP44L MGC127561 brain protein 44-like EMBV3_22593 GCAGGCAGACGAGCTGCACCAGGGCAGTGAGCAGGACTTTCTCTGGCGCCTGGCCCGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42033 TGTACGTGTCCATCGTGCTGGTCATCGGCAAGTTCGTGCGCGGCTTCTTCAGCGAGATCT Gene GeneID:789183|LOC789183:XM_002694859:812_cdna Constitutive 0 NULL GeneID:789183 18 GENE LOC789183 NULL similar to hCG1980844 EMBV3_37567 CTAGTGCCTGAGCACAGCTATGAGTTTTTCCTTTTATCAGCTTTGCCCGCTGCTGGGAGT Gene GeneID:526978|MANEAL:NM_001102105:203_cdna Constitutive 0 NULL GeneID:526978 3 GENE MANEAL MGC152422 mannosidase, endo-alpha-like EMBV3_00260 ACGTTTTTGGTAGTGCCTATACTAACTGATTGAAGGTAGTGTTTATTTTTCATTTGCGTC Gene BVV0102_442451 + 0 NULL GK000002.2:30415284-30433134 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33838 AGGGTCCAGTGGGGACGCCCTTACTGTGCTAAAAGCCACTGCAAACGGCAATAAAGACGT Gene BVV0102_217726 + 0 NULL GK000030.2:39835724-39840525 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244214 TCONS_00244211 TCONS_00244212 TCONS_00244213 1 XLOC_150397 Coding TCONS_00244214 XLOC_150397 Coding Coding SLC6A8 X:39833821-39837607 j TSS183588 2851 1 TCONS_00244214_4 175 0.115748860049106 6 0.248348745046235 0.00141151783376561 0.00065968282780098 0.000829892820738587 0.000755214551614523 0.000569876358441398 0.000176661064269722 0.000395465829396904 1.39257370447497e-12 0.000215173471887217 0.000116400688957123 9.72465229665957e-12 0.000324841378275494 0.000252475171048121 0.000624233558108632 0.000315699025558007 0.00686846286611686 0.00985782967747599 4.15404433896081e-13 0.00102765310148302 0.00172720626011004 1.29708430920463e-10 0.00381430593217667 0.00672630141197461 0.00129893562588097 3.88381994289945e-89 0.00112115621879906 0.00121474475450442 0.00280269430135982 4.7631944856613e-07 0.00307900575196836 NM_174611.2 SLC6A8 Bos taurus solute carrier family 6 (neurotransmitter transporter, creatine), member 8 (SLC6A8), mRNA. 0.0 1714 99.90 0.333917923535602 NM_001142805.1 SLC6A8 Homo sapiens solute carrier family 6 (neurotransmitter transporter), member 8 (SLC6A8), transcript variant 2, mRNA. 0.0 1586 77.65 0.702560505085935 TCONS_00244214_4 sp|O18875|SC6A8_BOVIN SC6A8_BOVIN Sodium- and chloride-dependent creatine transporter 1; 1e-124 369 100.00 0.994285714285714 1 coding 0 0 0 0 0.128464696617489 0.710353225583861 -0.218597780844073 0.107871352652423 GTTATGGGCCTACAAGTTTGTAGGTGTCGAAGGCTTCATCACTGGCTTGCTGGACCTCCTCCCAGCCTCCTACTACTTCCGATTCCAAAGGGAGATCTCCGTGGCCCTCTGTTGCACCATCTGCTTTGTCATCGACCTCTCCATGGTGACTGATGGCGGGATGTATGTCTTCCAGCTGTTTGACTACTACTCAGCCAGTGGCACCACACTGCTCTGGCAGGCCTTCTGGGAGTGTGTGGTGGTCGCCTGGGTGTACGGAGCTGATCGCTTCATGGATGATGTGGCCTGCATGATCGGGTACCGACCTTGCCCCTGGATGAAATGGTGCTGGTCTTTCTTCACCCCACTGGTGTGCATGGGCATCTTCATCTTCAATGTGGTCTACCATGAGCCGCTGGTCTACAACAATACCTACGTGTACCCGTGGTGGGGCGAGGCCGTGGGCTGGGCCTTTGCGCTCTCCTCCATGCTATGTGTGCCCCTCCACCTCCTGGGCTGCCTCCTCAGGGCCAAGGGGACCATGGCTGAGCGCTGGCAGCACCTGACGCAGCCCATCTGGGGCCTCCACCACCTGGAATACAGAGCTCAAGACTCGGATGTCAGGGGCCTGACCACCCTGACCCCAGTGTCTGAGAGCAGCAAGGTGGTGGTGGTGGAAAGCGTCATGTGACGGGCCCCCGGCACCAGCTCCCCCTCTTGTAGCCATAGCATCCCTGCTTTAGCCCCCCCCACCCCTCCCGGGGGGCTTGCCTTTCCCTGCCACTCAACGGGGGTCTGCCTGCCTGGGGTGGGGGGAGGGGAGGAAGCACCAGAGTGCTTATAACTCACTTTTTTTTCCATTTTTAATAAAACACCAAAAAAATACCACAACCCACCAAAAATAGATGCCTCCCCGCCCCCATAACCAAGCTGGTGCACACGCTGCTCCCCAGCGCACCGCCCCCCCCCGCCCCTGCTAGTACCCACTGCAGTCTCACCTCAGCCCCCTGCTCCCTGCCTGCCTCTCCAGGTTCTGCCCAACATACCCTTGGGTGGCCCCCACCCCAGAGGTAGCAGCGTGGGGCCCAGGATTGGAGAGCAGAGGGGGAAGGTGGGGCGCACAGCCACAGAACCAAGGCAGATACTTCAGCTGGGCTAGACCCCTCTCCCCATCCCCGATCTAGACGCTTAGAGAGCCAGCCAGCAACGGGACCTTCGGTTCCTGCGCCAATTGCCACCAATATCAATTGTGTGAGCTTGTGTATGAGTGCACGTGTGTGTGAGTACATAGGGTATAGATCTCTTCTCTCTCAGCAATGGTGAATACCAGGTGTAAGTTGTGCCTGTGGGCAAATGAGGCTTGTATTTTGCACATTTTATAAAAACTTGAGAGATTTCTGCTTGTATATTTCTAAGAGAAACACCCCAATGTCCCTCTCCTTGCCACGCCCCATCCCTTTCAGCCCCTCTTATACCTCTGCCCCCCAGCCAAGGAGTGTGAATTTCTAGATCTAATTTTCATAGGCAAAACAGAAGCTTCAAGCTATCAAGTGTGCAAGTCCGTCGTGTGGGTATGCATGTGCAGTCCCCAGCCCCAGACCAGTGGAAAAGTGCAAGGTTGGGGGGAGCCTCACTGGGTGTCCCCACAAGTCGGCAAGGTCGGCTGATGCATCACCATGGGGGCCCGTGGCTTCCCACCTGGCCTGCTCAGGCTGGCCCCCACCCTGCCCTCTGGGATGGGCACCACCTGGGACAGGCACCACCACTGCAGGGACCCGAGGTGGGCACCAGCCTAGGTATGGCTCCCACCTGAGAGCTTCAGGCTGATACACTGTCCATGTCTCAAATCCTCCATGTGTCAGGTTCACTGAACCCTGCGTGTCACGTCCAGTCCTGAGGGGGCCCTTGAGGGGCTTCCCTCACACCCTGACATGGGCTGGACGGGTGGGGCTGGGGGAGGGCCAGGGTCCAGTGGGGACGCCCTTACTGTGCTAAAAGCCACTGCAAACAGCAATAAAGACGTCATTTTCCAAAGCTGGCTCCTGCTTGTCAGGTGTTGGGGGGGCAGTCAGGGGATGATGGGGTGTGAGCCCTCCCCACCCTGAGTGGCTTCCCTGGGCAAGTGTTGGTTCTGAGGTCTCTACACCTGGCACAGTTCCAGGAACAGTGCAGGGAGCTGACATACTTGGGGACCAAGGGCCACTAAAGAGGAACGCACTAAGCAGGGAAGGTGGGTGTCAAGTCCAGGCTCTAGCTTCTCAAGGGTGCTCCTCTGAGAGCAGGTAGGGCCCGGGGGAAGGTTGGTCACTGGGCAGGACCAGGGCACTAGCAGGTGCAAAGTCACCAGGTTAGTGACCTGCCTGCACCTGATATGAAGAGCTGACTAACTGGAAAATGCCCTGATGCTGAGAAAGATGGAAGGCAGGAGAAGGGGGGTGATGGAGGATGATATGGTTGGATGACATCACTGACCCTGTGGACATGCTGCAGTCTGTAGGGTTGCAAGGAGTTGCGCACAACTTGGCAACTGAACAACCAACAGGTTTGTGGATGGCTGGGACCCCTTCTTGGGTGGTGTTGCCAGGCTCTGCACCAGGGAGACGAGGTTCAGAGGGGACAGTGTTATCTACCAAGTAGAAATGTCTAGTCGGCAGATAGACAAGGAGTTTGAAGTTCTAGAAAGTCTGCACTGTAGACAGAACTTTGGAAGTTCTCATTACATAAAGACGGCCCTGAGCCTGGATGAGTCCCTGGGCAGCTGGAGAGGGAGCCTTGGCCCAGGCACCGAGCCCTGGGGCCCTGGGACACTCTGGATGTGGCAGAGCAGAGGGGGAGCTGGCTGCAGAGTCAGGAAAGTTGGGAGGGACACCCC EMBV3_29301 GATTCCTGAGCTCCCTCCAGCTGATTAAAACTACCCAGCTCTGCATGCTGCTCCCAAACT Gene BVV0102_096432 + 0 NULL GK000010.2:21227254-21245091 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11366 GTGGTTTCTGAAACAGAGGTATGACACCAGAGCTTGCCGTTTTTAAAGGATTGTATCATG Gene GeneID:510209|SLC4A7:NM_001098926:77_cdna UTR3_Alt 2 NULL GeneID:510209 22 GENE SLC4A7 MGC157111 solute carrier family 4, sodium bicarbonate cotransporter, member 7 EMBV3_10309 TCCTCTGGCACAAGGAATAAGCCGAACCATCCAGTCAGGTCTCCCTCAACCTTAGAATCA Gene GeneID:528459|KRT85:NM_001075913:30_cdna Constitutive 0 NULL GeneID:528459 5 GENE KRT85 MGC139869 keratin 85 EMBV3_29528 GGAATCCTAAGATATGAGCTACTGAGGTCTGGAACAGAGCAGCCGTGACTGAGACTAGGC Gene BVV0102_277215 + 0 NULL GK000024.2:43734441-43858978 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12573 GAGGGACGTGTTTGACGAGGAAGCTGATGAGTAGCTCCAGCTGAGGAAAAGATTGATGAA Variant GeneID:508613|MGC140754:XM_002686900:90_cdna 115^469 2 EMBV3_31357 GeneID:508613 4 GENE MGC140754 NULL hypothetical LOC508613 EMBV3_29903 AAGAACAAGACAGCCAGGTACTTCTACAGTGCCAAGACCGGGTGCTGTGAGCCGTTTGTT Gene GeneID:100296963|LOC100296963:XM_002692334:125_cdna Constitutive 0 NULL GeneID:100296963 13 GENE LOC100296963 NULL similar to serine protease inhibitor, Kunitz type, 2 EMBV3_32323 TCACTCGACCGCCGACGATTTGGAAACGAGGAAATGCTATCCAGACCAAAGGAGTATCTC Gene GeneID:786611|LBXCOR1:XM_002690481:412_cdna Constitutive 0 NULL GeneID:786611 10 GENE LBXCOR1 NULL Lbxcor1 homolog (mouse) EMBV3_40603 TCTGGAGGAAACGGATGAAAATTTTCACAAGTATAAAGAGATGATTCATTCTCTGAAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17938 CTTGGATTTGGAACCTATGCACCTCCAGAGCCAGGGGAGGAATTATTTCCAAAAGATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_23443 CACTTCAAGGAAAAGAAGAAATCTTCAAAGTCTGCCAGTGCAAGCCATTCTGCAAATGCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36971 AATGTTGGTGAGATCGTGGGTGGCTCCATGCGTATCTGGGATAATGAAGAGATCCTGGCA Gene GeneID:616033|NARS:NM_001046572:194_cdna UTR3_Alt 2 NULL GeneID:616033 24 GENE NARS MGC127700 asparaginyl-tRNA synthetase EMBV3_14319 CCCTCGCTGCTCTTTCTCAGTCTTCACACACTTGCTTTCCCACATGCCACCTTAGTGTTC Gene GeneID:510660|HAUS5:NM_001101931:586_cdna Constitutive 1 NULL GeneID:510660 18 GENE HAUS5 MGC139333 HAUS augmin-like complex, subunit 5 EMBV3_29554 GCCGGCTCAGATTGCATGGCTTCATCTACCTTCAGGCTGCTCCCCAGGTTTGTTTAAAGA Gene GeneID:509834|DGUOK:NM_001014888:5_cdna Constitutive 3 NULL GeneID:509834 11 GENE DGUOK MGC137088 deoxyguanosine kinase EMBV3_30267 AGGAAGATGCCAGCTAATTCTGTGCTGGGCCCGCCGATTCCCAGTGGAAGATGTTGAATA Gene BVT0102_235660 + 0 NULL GK000019.2:15742733-15792360 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20973 ATCGATGAGTGGATGACCAAGTACAGTGTGCAGTACAGGACCGATGAGAGTCTGAACTGG Gene GeneID:615193|RS1:XM_002700378:34_cdna Constitutive 0 NULL GeneID:615193 X GENE RS1 NULL retinoschisin 1 EMBV3_07803 AAAGTTTTGGGTGAACTGGTGACTGGAGAGTCCAAAGGGAGCAACACGTTCGCAGGAGAC Gene GeneID:100139101|LOC100139101:XM_002698704:7_cdna Constitutive 0 NULL GeneID:100139101 27 GENE LOC100139101 NULL hypothetical protein LOC100139101 EMBV3_19233 ACAGTGTTACCCAAGGTTGTGTCTTTAAGGGTGGTTCATTTTCTCTGATCCTTTGTTTCT Gene BVV0102_149724 + 0 NULL GK000002.2:125255803-125294717 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106558 TCONS_00106560 TCONS_00106559 TCONS_00106561 1 XLOC_062835 Coding TCONS_00106559 XLOC_062835 NonCoding Coding YTHDF2 2:125293284-125324301 j TSS78408 2161 1 TCONS_00106559_3 76 5 0.930487490327573 1.95937786395274e-38 3.67014286663229e-05 8.76488332564106e-13 5.94650184348938e-08 3.01307093911033e-51 8.41007957831268e-22 1.97140989867223e-05 2.16962199900161e-51 1.21142595306458e-59 0.000328476512735278 0.000180007775098979 8.08270698742869e-05 7.93793313256838e-05 2.17254475156816e-08 0.000893702218717588 0.000441637080118188 3.54389548202596e-08 0.00530764260475945 8.00788364160863e-67 0.00021609859469496 2.4695036248283e-106 1.32990586431784e-08 0.00101417748081162 0.00129714358824923 0.000134557282125923 9.1872468649503e-30 0.000148399657499046 0.000840530537096047 0.000316423603738718 2.61097284649635e-09 NM_001076253.1 YTHDF2 Bos taurus YTH domain family, member 2 (YTHDF2), mRNA. 1e-155 554 100.00 0.141601110596946 NM_001173128.1 YTHDF2 Homo sapiens YTH domain family, member 2 (YTHDF2), transcript 0.0 1413 96.95 0.393799167052291 0 noncoding 1 1 0 0 -0.967442162752839 0.00488481065217467 0.655162360489281 0.000120169291618705 CAGCGTCGCGCCGCGCGCGCCGACCGCCTCCGCCGCCCGGCGCTCTTATTTCGGCTGCGAGGAGCGAGCGCGCGCGTAAAGGCATAGAGACGGGCGTTGAGCTCTCGGGCTAGAGCGTCGCCGAGTCGGAGCCGGAGCCCGAGCCGCGCGCTGTGTCTCCGCTGCGTCCGCCGAGGCCCCCGAGTGTCAGGGACAAAAGCCGCCACCGCGCCGTCTGTTCTCGTCGCCGGGGCTCATCCGCTGTCGCCGCCGCCCTGAGGAGAGTCTGCCGCCGTCTTCCCCCGCGAGGATCCGAGAGCCATGTCGGCCAGCAGCCTCTTGGAGCAGAGACCAAAAGGTCAAGGAAACAAAGTACAAAATGGATCTGTACATCAGAAGGATGGATTAAACGATGATGATTTTGAACCTTACTTGAGTCCACAGGCAAGGCCCATTTAGAAGGACCTTGAAAACTGCAGTGGTTAAGGAAGTCTCGAGGAAGGAGTTTTGAACTGTACCCTAAAGGTCAGAAGGCTAGGAACGTCAAGGTCGTGGGAAATAAGAGGCAGTTCTGCACAGACTGCAGCAACGGTTGCATCTGCATATCCTAAGAGGAAAAAAAATGACCTTCAAGAGAATTAGGACTTTTTTCTTAATTTCATTGACTTCAGAGACGATTGCAGACTTGCAGTTTAAGTATTGGAATTTCACAAATGACATAGGACTTAACTGGAAAATGAAAAAAAAAAGAAAAAGGAAAAACTAAACAAAAAATCCCTCTAGGTAGTTTAGGTGAAAAATGTCCCTTTTATTTTGGCTTTGGTTGTGATTTCAGAGCATAATGCTTTGTTTTTTTGTCTTTTTACTATGTTTTTCGGATTTTAAAGTCCGTAAGTACATACAGTTTTCTCTAATTTTTAAACCCTTTCCTCCCCCCGTTTTGACATTTGCACTTGGAGAACACTTGAGTTTTGAAGGTTTTGGGCATCCACCCCAGAAAGTGGGAATTTGGTTTTTTCCTTCCGAACTGGAAGAACATTTTTATGAAGAATTTCTGTCTTGGAGAATTTAACAGTGTTACCCAAGGTTGTGTCTTTAAGGGTGGTTCATTTTCTCTGATCCTTTGTTTCTCAAAGTAAAGTACTAGGAGTCCTAAGAAATGTTCTGTTCTTGTACATTATACTGATTAAGTCAGGATTAATTTGATTTCAAAGCTAAGAACAGTGGTAAAAACTTGTTTACAGAAATGCATTTTGGAAGAGAAAAATATTGTAAAAACGTGTAGTGAATGTTTCTTCAGTTTCTTGTTCAGCCAATGAGGAAAGGGCATTGCCTTTCTTTTTACCATTAATCACTTCTCAATAAACGTGAGATCCTGTTGAGCATCACTTCTAGTACCATTTATTAGTATTATTTGATTTGCTATGTTTTGTGAAAGCTTTGGAGTACAAGGAGTTTCACGAGGTGAGACAGCAACCATTTTTAGAAAGTTCACTGAGATGGAATAGTTCAGGAATTGCTTTGTACCCAGGGTTGGATAACCATGACCACTGCAAAGCAAGGTGGGCCAATATTCATAATGCTTTATTTCTGGATACTTCCTGAGAAGGTAGTGCCACTGCTATGCTAAATTGTTCAACAAATATTTGATTGTGAGTCTTTATTAGTTGCCTGGCAGGCACTGTGCTAATAACCCTGTAGTAACCTGGCCACATATCTTCTGTGCAAAATAGGTAGAGCCCAGTATCAAGGATATACATGTTTAATCTGAAATATGACTGACTTAGGCAGGATTCCATGTGTCCCAAGAATAAGAAATTCCAATGGGAATTTCACAATTCTTTGTGAACCATGTAACCATAAGGGTAATTGATTCATCATCATTTATTTTCTAAGGTTTGGAGATTCTCTTTTTTCTTACAGATTTTTAGCCCTTAAGGTGTCTCAGTTAAATGTAAAAACTTCTGTAATAAGAAAGGATTCAGAAAATAGATAATACTGTTGGATCGTGTTTTGCCCTCAAATGATTTATTCATCCCATTCTACACAACCCAGGCTACTAACTCAAAAGTGTGATAAAATTAATAAATTGCTGATTAATAACTAGCATTATTGTTAACGCTTAGAGTTGAGAACTTTGCTTTGCCTGAGACACGGTCCAGTATATCTAGATATTCCTATT EMBV3_12143 TATTTGCAAGGCATGTCTGATTTGTGCTTCTGTGCTTGGAGGAGGGATGGCCAGGGTGCT Gene GeneID:522344|RGL1:XM_002694211:61_cdna UTR3_Alt 2 NULL GeneID:522344 16 GENE RGL1 NULL ral guanine nucleotide dissociation stimulator-like 1 EMBV3_32552 CTGGGCCTCAGGTAGCCAACTTCAATCCTCAACTAAGGCAGCAGATAAAGAAAGGGCAAA Gene GeneID:786308|LOC786308:XM_002700365:8_cdna Constitutive 0 NULL GeneID:786308 X GENE LOC786308 NULL hypothetical LOC786308 EMBV3_20699 TGTATCTCAACCAACTGCTGTCCACGCCTCTTCCGGAGCCAGACCTAACTCGACTGTACA Gene GeneID:510558|ASTE1:XM_002685107:9_cdna Constitutive 0 NULL GeneID:510558 1 GENE ASTE1 NULL asteroid homolog 1 (Drosophila) EMBV3_25312 TTTGTGGGCTTAATATGGAACAGGCTCTCTGGTACAGCAGGAGACAACTCTGCCCTGAGG Gene BVV0102_029381 - 1 EMBV3_27673 GK000023.2:41523008-41969838 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00133470 TCONS_00133469 1 XLOC_081117 NonCoding TCONS_00133469 XLOC_081117 NonCoding NonCoding - 23:41554415-41577347 - TSS99669 1043 4 TCONS_00133469_4 42 2 0.95460293925254 0 0 0 0 0 0 4.47224416361854e-05 0 0 7.49514781226627e-05 2.19180378367118e-06 0 0 6.31392320638639e-05 0 0 0 0 3.42779082865109e-06 0 0 0 0 0 0 0 2.55848402661582e-09 0 0 9.22213858054373e-05 0 noncoding CTGGATGTTTGTGTTGGCCAGCTGTATTCTGTCCAGCTGGACTTGAGATGTGAATGGACCAAATGGTCTGAACACAGCATCCTAAAGTTGGCGGCGCCATGAATCAGAGGAACTGATGCCACCGAGCTGGTAGCTGCCAGACAGCTTTGATTGCTCTCAAGCCTGGACTGTTCTGTGAGAAAGAACAAACTCCTACCTGCCTAAGCCGCTCTCATTTCAGATTTGTTACATCAGCCATACCTAAGTCCTGGCTAATGCATATGCTTACCGGAGCATCTGGGAACAGTCTGTGCATTGTGCAATCGTGACGATGTGTGTGAGAGCCGTGCGCATGGAGCTTGACCTGTTATTGTTCGTGATTTGGAGGAAACTTGCAGCTTTGCTCTTTTTCAGTTTCTCTGACTTACCCTCCGCGCTTCCTTTTTAAGAACCCAGCTCAGTGCTGTTCATTTGGTTCCCTCAGTGTCCTCTGGTATGTGGTCTTCGGACCCTTTGTATGTGTCTCCACAATGGAACAGCTCCCTGTTTAGAGGTTTTTCCCCCATCGTGGCCCTTACCACCCGGGATTGAAGTGGCCCCATTCCTGGGGCCCCTCCCCGCAGGGCTGTGAACTCCCTCAGGGCAGAGCTGTCTCCTGCTGTACCAGAGAGCCTGTTCCATATTAAGCCCACAAAGCATATTTGTGAAGTGCTCATACATGTGAATGAAGGAAGGAATGGAGGAATGCATGAAAACATTGTAAAGTGGGGTGTTTATAATGATGGCCTCCTGTTATGGCTGAAAACTCACTTCTCTATGTGTTTGATGTTGGCCCATGTGGGACTTTGCAATATGGATGTCTGATGTAATAATGAGGTTTTATTTGGGAGGGACACCCTGCACAGTTAAACGCCCTTTATTCTTTATACAATCGGAGCTTTCAAATCAAGTCCTAGTCACATAACTTTCCATCCTACTTTTCTGTCGTTCTCCTTGTCCTTTGCCTTCTACCCTCAGGAAATCCCCTGTATCTGTAGCCCTTTATTTTCAAGAAGTAATCATGT TCONS_00135212 r 5' 158945 TCONS_00135212 r 5' 158945 EMBV3_18652 CAGGGATGCCTTTGAAGACTCGTTCTTGCCAAAGGACTGGGACTGCAGCACCCACCTTTT Gene GeneID:100298542|LOC100298542:XM_002695050:386_cdna Constitutive 0 NULL GeneID:100298542 18 GENE LOC100298542 NULL hypothetical protein LOC100298542 EMBV3_24585 CCATGGACATAAATCCCCAAACCCCGAAATACAACCACAGAAAGCACTCAACTGGTTTGA Gene GeneID:531515|ARID4A:XM_002690958:323_cdna Constitutive 0 NULL GeneID:531515 10 GENE ARID4A NULL AT rich interactive domain 4A (RBP1-like) EMBV3_37623 TATCCTGGCTGCCGCCAGCCCGTACATCAGATCCGGCTGAACGAGGACACCATCCAGGAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08126 CCAGGAGCTTCAACAATCTATCCTGCTTCTGGGGGCTCTGATGACTGGGCTTATGACCAA Gene GeneID:510039|CPB1:NM_001105350:26_cdna Constitutive 0 NULL GeneID:510039 1 GENE CPB1 pCPB carboxypeptidase B1 (tissue) EMBV3_25833 AGTCGGGGGTGCTGGACACGCTGACCAAGGTTTTTTAAAGCATCACTTAGGAGCTGCTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31621 GATGAAACAGAGGGAGGCTAAGTGATGTGTCCACAGATACCCAATGCTCATGTACGTGCC Gene BVT0102_336052 - 1 EMBV3_20960 GK000015.2:65854402-65996525 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00065610 1 XLOC_040329 NonCoding TCONS_00065610 XLOC_040329 NonCoding NonCoding - 15:65888346-65890201 - TSS49353 1855 2 TCONS_00065610_5 86 0.117520215633423 1 0 9.53499559300608e-05 0 0.000104762315741019 0 0.000151708487834856 0.000109914823816556 1.257508901743e-05 4.46393742702042e-05 2.12672825961513e-05 0 0 0 0 0 0 0 0 0 0 1.55071327694702e-05 0.000392763078788189 0 0 0 7.47004510307164e-05 0.00011014470528863 6.3171442741938e-06 0.000124272277886885 2.61703675608021e-06 0 0 noncoding 0 0 0 0 0.0797259655470969 0.522413405008794 0.00832665105670831 0.872917185265746 GTGGTAACATAGTTTTCAGTAAACACTTTTCTGCTTTTGTGCTCCTTCAGGTACTGTGTTCAGAATACAGAGCTCGGTGGCTGGCTCTGGGTGAAGGGTCACTGGCTGGCTATATGCCACACTTTGCCCCACCATAGAGCAGGATTCTGTAACTAGAACTTTGCTCCTGAAATTCTTTTTGGCCCCAGTGATAAGCATCGTGTAAAACTCTAGTAGGCTGGGGTTCAACATGCAGATGATTCTGTCTGAAACTGGTTCAAGGTTGATTGCATGTAATTTTTTCTCTTTCAAATCTCAGGGCTTTGAGGGGAGGGTAGAAAAGCCATTCTTTTTTTGCAGTGTTGTCCATTGCATTCCCAGTAAAAGCCAGTCACAACTTCCAGTTATTGCAACTATGGAAAATACCTATCCCAGTTTCCAAAACCTCCTAGGCGCGCTGCACCATCTTCTGTTGTGAACCACAGGATCAGAGAGCATGTAGGTCATCTTATTTGATGATGGTGTGAAGTTGAGCATAGAACTTTCCCTACTAGGCTAAAAGCTCCATGAAACCTAAACAAACCCATGGTAGGTTTTAGTCTCTATTGTTTTCTGGTGCCTATGACAGGGTTTGACCCTTACTGGATTCTCAAGAGTTATATGCACCCAGCTGATGGAAAGACTGCATAGTATAGCATTCATTTTGCGTAACTTGGTCAAACTGTAAGTGCAGAGTTGTTTTTTTTTTTTTCTTTTTATAAACGAGGGGGATATTTAATTATTTAACAAAGAGTACTCACACAAGTTCTGACCAGTCAGAACTTACCCTGGAGAGTCTGGGGCCCCCTTGCTAGGACAGCACCCTTTAGTTGCTAGTTGATGGGGCAGTCCAGGGGCTGCCAGGAATATGAGTCAGGGAAGCAGGAACAGTCGAGGACAGTGTCTCTTTGTCAAACAAATTTTAACAGCTAGCGAGGCAATACTAGAGTATACGTTAGAAAAGCATCAGAGTGGCTATTGTGTAGAGTGCAGTATAAAGAACATTTTAAGGATTCCCTGGTAGCTATTCATTGACCAAATATTGTGAAATTTCTTTACAAAAGGTTCTTCTCTGACTTGCAGCCTTTCGCCACTTACTTTTTTCCCCCTGAAGTCTCCCTTGCCTTTGCTCAGGGAACGTTGATATTGTTCAAGAAAAGAATGAGAAAGAACACTGGGATTCACCTCGCATGGCATGGGCGTAACTGAGACAGACGCCTGTTTCTCGGGAAGCTGGCCAAGGTTTACTACGCTCACTAACAATGTCTTCTAAGCCCCTTTGCTCTTCCCATTGAAGCTCTAGCCTTTTCTTCAGGTGAGCCCACTTGATTTCTAGTTTCCAGATGTTGGCTGAGCAAGTGACCTGGTGGGAAGGAAGGGATGGTGAATGGCTGTTTGGATTCCAGGAGATCAGGAGACCCGGATTTGAGTCCCGTCTCTTTCCTTACCAAATGGGAAGCAAAGAAAGAAAAGGCACGTACATGAGCATTGGGTATCTGTGGACACATCACTTAGCCTCCCTCTGTTTCATCAACTATCAAATGGGGGCTCTGCCTTGGCTGCTCTTCTCCCAGCCCAGAATCCTTGAGTCCCATCTGCTCTGACATCTCCAGGCATGGGTGGAAGGTTTGTTCCAGCCCACCGCTGTGGCTGCTGGTCACCTCTTTCCTCGCCTGTGTAACTGGACCCCACCCACAGCAACCTGGGATCCATCTCCTCTGCCGTGGGCCACCAGCCCCGGACCTTAGCTCAGAGGGTCTCCTACATGGAACTACAGCCGTAAGGCCCTTCCTCCTCCAGGTCCACCCTCTTCCTCCTCCCCCACTCTCACTCCCTC TCONS_00062172 TCONS_00062173 . 5' 33946 TCONS_00062172 TCONS_00062173 . 5' 33946 EMBV3_26530 ACATGGCTTTAGGGAATTCCCAGGCGATCTAGTTGTTAGGACCCCATGCTTTCACTGCTG Gene GeneID:537878|PEX26:NM_001101172:88_cdna UTR3_Alt 2 NULL GeneID:537878 5 GENE PEX26 NULL peroxisomal biogenesis factor 26 EMBV3_33541 TGAAACAGCATGTAGGTTTAGGGCAGCTTTGCACGTTGACTGCCTACTGAGGGTTCTATG Gene BVT0102_324817 + 0 NULL GK000019.2:55905450-55917030 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00094638 TCONS_00094637 TCONS_00094636 1 XLOC_057504 NonCoding TCONS_00094636 XLOC_057504 NonCoding NonCoding - 19:55911349-55913256 - TSS70739 626 2 0.672612801678909 0 0 5.06393751662085e-05 0 0 0 0 0 0 2.62899483806333e-05 3.65650789296869e-06 0 0 0 0 0 0 0 0.000286035688138059 5.45426962379199e-61 0 0 0 0 0.00022135583662222 4.50174010641254e-05 9.35831036090839e-06 0 0 0 XM_005218023.1 CRYBB3 PREDICTED: Bos taurus crystallin, beta B3 (CRYBB3), transcript 3e-17 93.3 78.15 0.188498402555911 0 noncoding 0 0 0 0 0.0871494028585632 0.531931225049319 0.0479866679147228 0.373666276163945 GGCAGCGCCTATCTGAGCCTTGGGCTGGCTGGACCCTTTGGTTACCAAACCTCATACAGTTATCACCTTCTTTTCAAAAGTCCACATTCTGCCATTTCGCTTTTATGAAAGGCTTACATTAATACCTGTTTTCACTAACCAAAAGAAATCTGAAGAGGATTTTCGCTATTCCATGAAAAGAGGTGAAAATCGAAAACAGCACTGGGGGATCGTTTGGCAGCGAACAAACTGAATGCAATAGCAAAACGCCCGAGGGAAGACGTCCAGGAACCGGAGAAGCCGTTGACTGAGGTTTTCACTGTGATTGCCAGGGCTACAATGATTACAGGAAAACAGGACTAATTTTGAAACAGCATGTAGGTTTAGGGCAGCTTTGCACGTTGACTGCCTACTGAGGGTTCTATGATAGAACAACATGTGAGTCTAAGCAGTCAAGCTTACTGTCCTATTCCCAGCCTTCCTCACCAGCCACGCTAGCCACATCAGCGACATCAGGTACAGCAGACAGCGACCCTGACCTTTGACTTCGAGGCAAGCAGACCTAGAAGACACAGCTGTCAGTGACCTGCCTGCCCTGATGGATTCAGACGTGCATCAGGGTCTCCTGTGGAGACAATTTTTAAAGC TCONS_00097900 r 3' 3775 TCONS_00097900 r 3' 5681 EMBV3_18042 AGGCTGTGTATCTGAACAAGGATCACCGAGCAGGCAACACCAGCAGAAAGCTATGGGTCT Gene BVT0102_024117 + 0 NULL GK000006.2:107928269-107929463 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00206160 TCONS_00206167 TCONS_00204111 TCONS_00206159 TCONS_00206172 TCONS_00206161 TCONS_00206164 TCONS_00206166 TCONS_00206170 TCONS_00206171 TCONS_00206168 TCONS_00204109 TCONS_00204107 TCONS_00206169 TCONS_00206165 TCONS_00206163 TCONS_00206162 2 XLOC_124846 XLOC_124343 Coding TCONS_00206172 XLOC_124846 Coding Coding ADD1 6:107928169-108018621 = TSS153789 3832 1 TCONS_00206172_4 769 15 0.957800355993853 0.0084639119170384 0.00480211302419215 0.0069555529263155 0.00332730545942127 0.00654852957636207 0.00209655095860815 0.00358624881049413 0.00387125473978765 0.00292677888223899 3.98789229982941e-07 5.18928300331672e-33 0.000100559426579392 0.000416431529010461 0.00205856513740625 0.000314841499820752 0.000161887291799294 2.08012498504425e-63 0.000206220198903756 0.00220101010189079 0.00680154003522396 0.00430614040048003 1.73878093202291e-09 2.75971013831536e-30 0.000209671109010806 0.00582170650969715 0.00138840848146278 0.00382260399996435 0.000184924887376186 8.73710952667832e-05 4.94009570704645e-46 NM_001205999.1 ADD1 Bos taurus adducin 1 (alpha) (ADD1), mRNA. 0.0 4576 100.00 0.661795407098121 NM_014189.3 ADD1 Homo sapiens adducin 1 (alpha) (ADD1), transcript variant 2, mRNA. 0.0 3056 86.34 0.65866388308977 TCONS_00206172_4 sp|P35611|ADDA_HUMAN ADDA_HUMAN Alpha-adducin; 0.0 1324 87.40 0.998699609882965 1 coding 0 0 0 0 -0.135555581981347 0.353202636145042 -0.00228799269038001 0.96053862341642 GGGCTGCGGCGCCGCAGGCCGCACCCAGCTCGGGCGGCTGGGGCTGTGAGGAGGGCTGAGGGGGCGGGAGGCCGGGCGGGCCGGGGCTGCGGGCCGGGGTTCGCGCGGCGGACAGGGGGCGGAGCCGGAGCCGGAGTCGCCGGAGCGGACGGGCGGCTGTCGCACTGGGACCTAGGAGCTTTCGCGCTGCCCGCCATTCGCCTCTGAGGAACCTAGAAGGACTGTGCGATGAATGGTGACACTCAGGCTGCAGTGGTGACCTCACCACCCCCGACCACAGCCCCTCACAAAGAGCGGTATTTCGACAGAGTGGATGAGAACAATCCAGAATACTTGCGAGAGAGGAACATGGCGCCAGACCTTCGCCAGGACTTCAACATGATGGAGCAGAAGAAGCGGGTGTCCATGATCCTGCAGAGTCCCGCTTTCTGTGAAGAATTGGAGTCAATGATACAGGAACAGTTCAAGAAGGGGAAGAATCCCACAGGCCTGTTGGCCTTGCAGCAGATTGCAGATTTCATGACCACAAACGTACCCAATGTCTACCCGGCAGCTCCACAAGGAGGGATGGCGGCCTTGAACATGAGTCTTGGTATGGTGACTCCTGTGAATGACCTTAGAGGGTCTGATTCTATTGCCTATGACAAAGGGGAGAAGTTACTGCGGTGTAAACTGGCAGCGTTTTATAGGCTAGCGGATCTCTTTGGATGGTCTCAGCTTATCTACAATCATATCACAACCAGAGTGAGCTCGGAGCAGGAGCATTTCCTCATTGTACCTTTTGGACTTCTCTACAGTGAAGTGACTGCATCCAGTTTGGTTAAAGTCAACCTGCAAGGAGACATAGTGGACCGTGGGAGCACCAACCTCGGTGTGAACCAGGCTGGCTTCACACTGCACTCGGCCATCTATGCTGCACGCCCGGACGTGAGGTGTGTCGTGCACATCCACACGCCAGCCGGGGCTGCGGTCTCTGCGATGAAGTGTGGCCTCTTGCCCATCTCCCCTGAGGCACTTTCCCTTGGAGAAGTGGCATATCACGATTATCATGGGATTCTGGTTGATGAGGAAGAAAAAATTTTAATTCAGAAAAATTTGGGGCCTAAAAGCAAGGTTCTTATTCTCCGGAATCACGGCCTTGTGTCTGTTGGAGAGAGCGTTGAGGAGGCCTTCTATTACATCCACAACCTTGTGGTTGCCTGTGAGATCCAGGTTCGAACTCTGGCGAGTGCGGGAGGGCCAGACAATTTAGTCCTCCTGGATCCTGGGAAGTACAAAGCCAAGTCCCGGGCCCCTGGGTCCCCGGCAGGGGAAGGCAGCGGATCACCGCCCAAGTGGCAGATTGGCGAGCAGGAGTTTGAAGCCCTCATGCGGATGCTGGATAATCTGGGTTATAGAACTGGCTACCCTTACCGATACCCTGCTCTGAGAGAGAAATCTAAAAAGCACAGCGATGTGGAGGCTCCTGCCAGTGTCACAGGTTACTCGCTTGCTAGTGACGGTGATTCGGGCACTTGCTCCCCTCTCAGACACAGTTTTCAGAAGCAACAGCGAGAGAAGACAAGGTGGCTGAACTCTGGCCGGGGCGACGATGCTTCTGAGGAAGGGCAGAACGGAAGCAGTCCCAAGGCGAAGACTAAGGTGTGGACGAACATTACACACGATCACGTCAAACCCTTGCTGCAGTCTCTCTCGTCCGGTGTCTGCGTGCCAAGCTGTATTACCAACTGCTTGTGGACTAAAGAGGATGGACACAGAACTTCCACCTCTGCTGTCCCTAACCTGTTTGTTCCATTGAACACTAACCCAAAAGAGGTCCAGGAGATGAGGAACAAGATTCGAGAGCAGAACCTGCAGGACATTAAGACAGCTGGACCCCAGTCCCAGGTGTTGTCTGGTGTGGTGATGGACAGGAGCCTTGTCCAGGGTGAGCTAGTGACGGCTTCCAAGGCCATCATCGAGAAGGAATACCAGCCCCACGTCATCGTGAGCACCACCGGCCCCAACCCCTTCACCACGCTCACCGACCGCGAGCTGGAGGAGTACCGCAGGGAGGTGGCGCGCAAGCAGAAGGGCCCGGAAGAGAATCTGGACCAGGCAAGAGAAGAGAAAGAGAAGAGCCCTCCGGAGCCGCACACGCCCCCCAGCACCCCTGTCAAGCTGGAGGAAGACCTGCCGCGGGAGCCTCCGTCTGCAGACGACAGTGACGCTGCCACCTTCAAGCCGACTCTGCCCGACCTGTCCCCCGATGAGCCTTCAGAAGCACTCGGCTTCCCGACGTTGGAGAAGGAGGAGGAGGAGGAGGAGGAGGGGCTGGGTGAAGCTGGGGGCCCTCCAAGCCCCTCCGGGTCCCCCTCCAGGTCCCCCCCGGTGGCCAGCCCCGAGCCAGCCCCAGCCCAGGTGGCTGAGGAGGCTGCCTCCCCAGCAGCCGAGGACGCTGGCAGTGATGGGTCTCCGGGCAAGTCCCCATCCAAAAAAAAGAAGAAATTCCGCACCCCTTCCTTCCTGAAGAAGAGCAAGAAGAGGAGCGACTCCTGAAGGCCCTTCCTGCACACGCCGCGCCGCGCCCCCGTCCCGTGTAATGGAATGCAGAGGCCCGCCCCCGCCCCGCCCCCGTGTAGCCAGCGCCTCCCTCGGTGTGACCAACCCCCACGTAGACCGGTGCTAACCTCGCGTGTGTGCAGCGGCCTGGCCCGCAGCCTCGGGTTCTGGGCCAGACGCGGCCTCCACATCCACCTCGGAGCCAGCCCTGCCCTGCAGGGGTCAGCACCTCGGCCCCTCTTGTAGCTCCTCAAGGACACTGTCCCCCTGGAGCCGAGTCAGGGTCCCGGCTGGACGGGGGCAGACCTGCCCACTCTGGCCTTGACCCCGCCTGCTCTCCTCTCGTGAAGTAACCCGCGCCCCATCTCTGCTAGGCTCCCCTTCACCCCCAGGTCTCAGGTGACTGAATCAGACCCATAGCTTTCTGCTGGTGTTGCCTGCTCGGTGATCCTTGTTCAGATACACAGCCTCAGTCCTGTGAAAGCGCCCCAACAGCCCAGGCCCCTGGGATGGCCTTGGAGAGGGTCAGGGCTGAGCCGGCGCCCCAGTAGCTCATGGCGCAGCTGGTGCTGGTCCCCGGTCCCCTCAGCCAGAACCAGACCAGGGGCCTCGCTTCCCCCCTGAAGCGTCCTGAACCCGTCGTCATAGGGATGGCGCCTCTGGGGGGTGGTCCTGCGGACCTGCAGCTCCCGCAGCCCCGACGCCATGCACGGGCAGCACTCTGCTTCTGCTCTCTGTCCTGGGGAGGGCCTGGCACTGAGGCGGGTCTGCACCTGAGCTCAGCTTGGCTGGGAGGCTCATTCCCTTGGTTAGAGGGCAGCTTAGGGTGGGGGTAGGCCCCAGAGGTCCACTGACGTCCTGCAGTCACCCCAAGGCCCCTCCCGCCCTCCAGCGCCGCATCCGTGGAGCAGAGCCGGGGGCTGCTTGGCTGGAACTTGGGGTGGCCGGGGTCTCCTCGACAGTGGGCTGTCCCAGGAGCTCCAGAGCCAGCCTGTCCCGACAGGCCCCTGGGGTGAGGGGACCTGAGGCCGCCTGCATGGCGCTGACCTCCGCTTAGAGCTTCCTGGCAAGCTGCTCTCTGTGTTGTCTTGTCCTGGTGGTGGTCGAGCTCCCCACCCTCACCCTGCACTCAGTTAACCACAGGCTCCTCCTGCCCTCTCTTCCTCTCACCCCACATATGCAATGACTTTAATTTCATTTTTGTAGTTTATTTTAACTCTTTGTATCTCAACATGAAGTTTAGTTGCATATACAGACACAGGCTTGGGAGGACAGGTCCTACGGCCTTTCT EMBV3_15307 AAGGCACTCCCTCCTCTGCCTCCCCTCTGAGCAGAGAGATCAGAGTAGGATCACATGAAA Gene GeneID:540153|TENC1:XM_002687243:69_cdna Constitutive 0 NULL GeneID:540153 5 GENE TENC1 NULL tensin like C1 domain containing phosphatase (tensin 2) EMBV3_24411 CCACGAGCCGGAGCGGCAGGAGTCGGCCATCCACATGCACTTTGGGGAGGCCTGGCTTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25345 TGGTGTCAGGGTCAAATTCTGCTTCCGCTTCTCTAAGGCCGCCTCGATGGGTGAGCTTCA Gene GeneID:539146|GPR132:XM_002696852:700_cdna Constitutive 0 NULL GeneID:539146 21 GENE GPR132 NULL G protein-coupled receptor 132 EMBV3_10545 ATTTAGTTCCCACAGTTTTTCCTGCATTTGGTGAAGAGGTTGCCAGCTGCAGTATCACTG Gene BVT0102_088642 + 1 EMBV3_01579 GK000002.2:88947501-89166307 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18891 GCTCAAGCTCCCGTGTGGCAGGGCCCTGATGAAACACCCCTGACCTTATGGCCGCCCAAA Gene GeneID:615329|CSRP1:NM_001083771:198_cdna Constitutive 0 NULL GeneID:615329 16 GENE CSRP1 NULL cysteine and glycine-rich protein 1 EMBV3_04732 ACCAACAGCTAAAGCCAGGGAGGAACTGTTACGAATAAGTCTCCGAGAGGTGGATTTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07453 GTGCCCTCAAACAAGCTCTGCTCAGAAAATCAAGAGAAACAGAATCCATGGCAACACGTC Gene GeneID:774027|MBIP:NM_001077518:62_cdna Constitutive 0 NULL GeneID:774027 21 GENE MBIP MGC143421 MAP3K12 binding inhibitory protein 1 EMBV3_35343 CAAGCATGACAGCAACTCAAACTCGGCAAACTTCCAAGACACCGAGGACATGCCTGACAG Gene GeneID:525892|WDR72:XM_002690898:47_cdna Constitutive 0 NULL GeneID:525892 10 GENE WDR72 NULL WD repeat domain 72 EMBV3_17791 ACCATCCCAAGTCCGAGAGGAAGAAGGAGGGGGTCACTGGATTCAGGATTATGGTGGAAA Gene GeneID:538940|CDAN1:XM_002690811:40_cdna Constitutive 0 NULL GeneID:538940 10 GENE CDAN1 NULL congenital dyserythropoietic anemia, type I EMBV3_25331 ATCAGCTTCTCTCTCGGAAAGCTTGTGCTCAAAGGAACGAGGTCTACCCCGCAGGTCATA Gene GeneID:534678|TMEM163:NM_001101160:5_cdna Constitutive 0 NULL GeneID:534678 2 GENE TMEM163 NULL transmembrane protein 163 EMBV3_42492 CAGCTCCACTCACCACGGCCCCATGATACCAAACCAGGAGCCCACAGCATCTGGATGCTT Gene GeneID:100335839|LOC100335839:XM_002694862:821_cdna Constitutive 0 NULL GeneID:100335839 18 GENE LOC100335839 NULL hypothetical protein LOC100335839 EMBV3_07666 CCAATTGCATCGTTTGCATTTTCTGTAAGGATAAAATTGGTCCAGTGTTTGGCGGAAGCA Gene GeneID:282107|UBE2A:NM_001105325:5_cdna Constitutive 1 NULL GeneID:282107 X GENE UBE2A BHR6A HR6A MGC127256 ubiquitin-conjugating enzyme E2A (RAD6 homolog) EMBV3_19202 CTCGAACTTTCTTACTGGCCTGAGAGCTTTAGGGCTCCTGGGGTCACGATGTCAGAGAAA Gene GeneID:100295449|LOC100295449:XM_002696951:81_cdna Constitutive 0 NULL GeneID:100295449 22 GENE LOC100295449 NULL similar to split hand/foot malformation type 1 EMBV3_20289 AAACAGTTGTCATTTCTGTCTTGGCCGGTCTTACACGGGGATGGGAAGGACCAAGCCGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31653 GCTGCCTTGGGGCCTGGTGTTCTCAGCTTCTTCAGAGCATGTAACAGGAAATTAAATGGG Gene GeneID:782132|ZMAT2:NM_001080343:47_cdna UTR3_Alt 1 NULL GeneID:782132 7 GENE ZMAT2 MGC143137 zinc finger, matrin type 2 EMBV3_42260 TCGATATCCTGGTGGCTGGCAGTATGCTTGGTCTTCAACAAACTCATCAGGAGATATAAG Variant GeneID:326579|BZW2:NM_001104961:5_cdna 334^437 1 EMBV3_28210 GeneID:326579 4 GENE BZW2 HSPC028 MGC166073 basic leucine zipper and W2 domains 2 EMBV3_17725 CTTATTTGGAGAAGACCCCGATGTTGGGAGAGATTGAAGGCAAAAGGAGAAGGGGACAGC Gene GeneID:509072|ALS2CR8:NM_001032294:82_cdna Constitutive 0 NULL GeneID:509072 2 GENE ALS2CR8 NULL amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8 EMBV3_11629 ACGTTCCCGTAGACTCAACTTCCCTCTGGAGTTTCACGTTATGCCTCTTTCAGGCAAGTG Gene GeneID:530657|COL6A3:XM_002686570:23_cdna Constitutive 0 NULL GeneID:530657 3 GENE COL6A3 NULL collagen, type VI, alpha 3 EMBV3_02984 AACTGTCATGTTTCCTCCTCAGTCCGTGCTGTCCCTTTCTCAGTCCAAAGTCCTGCCTGT Gene GeneID:281099|CSN2:NM_181008:8_cdna Constitutive 1 NULL GeneID:281099 6 GENE CSN2 MGC133765 casein beta EMBV3_21076 TACAGGCCAAACTGATTTTCTTGAATTTCGGCACACGGTCCCCACTGTCTGGTGGAAGAA Variant GeneID:768242|ABHD12:NM_001078116:53_cdna 401^506 1 EMBV3_02305 GeneID:768242 13 GENE ABHD12 MGC140778 abhydrolase domain containing 12 EMBV3_42555 GGTTATGGAGATGTGGTGTTTGTCAGCAAAGATGTGGCCAAGCACTTCGGGTTCCGGTCA Gene GeneID:614868|KHK:NM_001076351:225_cdna Constitutive 2 NULL GeneID:614868 11 GENE KHK MGC151915 ketohexokinase (fructokinase) EMBV3_21633 CTATTGCATGATTAGCCCCCTGTTTGGCAAGGGAACCCCATACAAAGGAGACACCAAGCC Gene GeneID:508266|CHN1:NM_001075349:214_cdna UTR3_Alt 2 NULL GeneID:508266 2 GENE CHN1 MGC139749 chimerin (chimaerin) 1 EMBV3_28929 GGGAACGTTTTCAGGCTCTCCTTCTGTAGGGCCAACGTGGTCAATCACTTCTTTTGTGAC Gene GeneID:509890|LOC509890:XM_002693784:73_cdna Constitutive 0 NULL GeneID:509890 15 GENE LOC509890 NULL similar to olfactory receptor, family 5, subfamily B, member 12 EMBV3_10079 TCAAGATCTGGTTTCAGAACCGGCGGGCCAAGTGGAAGCGCATCAAAGCTGGGAACGTGA Gene GeneID:518355|LOC518355:XM_002686975:793_cdna Constitutive 0 NULL GeneID:518355 4 GENE LOC518355 NULL similar to Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1) EMBV3_03885 CCTGCGGCTACTCCAGGACATCAAGGAGACTTTCAATAGGTGTGAAGAGGTACAGCTGCA Gene GeneID:540265|TRIM41:XM_002689053:23_cdna UTR3_Alt 2 NULL GeneID:540265 7 GENE TRIM41 NULL tripartite motif-containing 41 EMBV3_00798 ACAACACTGTTTATACCTAAAACCATGACACTCTCCCGACACTGGCCACTTGGTGCCACC Gene BVT0102_030972 + 0 NULL GK000025.2:42362919-42368519 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147472 TCONS_00145714 TCONS_00145709 TCONS_00147471 TCONS_00145711 TCONS_00145713 TCONS_00145712 TCONS_00145715 2 XLOC_089387 XLOC_088908 Coding TCONS_00145709 XLOC_088908 NonCoding Coding ADAP1 25:42325540-42364607 o TSS109130 655 1 TCONS_00145709_2 82 2 0.983284697691087 0.00998118397303802 0.0129429459342715 0.00830342738778272 0.00349285923643847 0.0109379354210701 0.00469965505629804 0.00448123915531224 0.00581605194819095 0.00562159770967757 0.000937634663144101 0.000440543395572384 0.00046265812440043 0.000283100525858984 0.00484262867216771 0.00206839526300902 0.00725131990831148 0.00613297105623817 0.00529251948484835 0.0109751579452853 0.0123698550647026 0.00461589630683618 0.00279989938476667 0.00296835025408096 0.00166209385601804 0.0140811618936981 0.0160658918500599 0.00930377010152002 4.50645490112043e-140 0.000494081635997124 0.00234239398187006 XM_005225011.1 ADAP1 PREDICTED: Bos taurus ArfGAP with dual PH domains 1 (ADAP1), 0.0 1177 100.00 0.993893129770992 NM_001163316.1 Get4 Mus musculus golgi to ER traffic protein 4 homolog (S. cerevisiae) (Get4), transcript variant 2, mRNA. 5e-15 86.0 85.53 0.111450381679389 0 noncoding CCTGGGAGCCCAGGTCCTCAACTTCAGAGCAGGCAGGAGGGCTCGCCCAGGGTCCCCAGATCTTCCTGACCACGCAGGGCTGCCCAGGACTCAGCCTCGGGCCCTGGGTTGTGGCAGCCTGCTCTGTCGGTGTGGGCTCTGCACACCTGTGTCTGTGTGTGTGCACGCCCATGTGCTCTGCCGGAAAGCTCTAGAAAAGAACAGCTGCATGACCAGCCAGCAGGGAGACTCTCTCAGAAAAAGCAGAACCCACGAGGCGGTGCGGAGTCAGAGGCACACAGCCCGCGTGCAGGCATCACAGCATCTCCTGCTCGGATGAGACCAGGGCACCCAGCCCCACCGGCCGCTCACCTGTCCGCAGATTTAAGTACAACACTGTTTATACCTAAAACCATGACACTCTCCCAACACTGGCCACTTGGTGCCACCCACCAAGGACACACTCCAGACAGAGCTGGAAAAACACTGGTCCCAGCGCCCGCGGGCCTCACGGGGCATCCAGGCCGCTTCTCCCCGCCCACACCCAGCCCCAGGAGCTCCCTCAGAAAGGACCACTGCTGCTGAGCCCAGTATAAAGGATTTATTTAAACTCAACAATGAACACAAACCTTCCTTTAAATTCCATTTTTACAGTAAATAAAATTGTGTACTGCGT TCONS_00147473 r 5' 0 TCONS_00145704 TCONS_00145705 s 3' 3295 EMBV3_25137 CATGAGGATTTTTGGATGTTGCTGGGAGGTCGGGTAATGGGTAGGACGACACTACTTAGC Gene BVV0101_025844 + 0 NULL GK000004.2:95854455-95956957 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23640 AGGGATGGTAGAGGTGGGAGGCCTGTGAAAAGATAACTTGAATTCCGGAGAGGAAGCATC Gene BVT0102_079856 + 1 EMBV3_21400 GK000010.2:24802962-24832964 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42303 AAGAAGCCGCAGCTGTCCTTGTCATTGTTAGAAATCCGCTCCCTATGTTCCCCTGACCAG Gene GeneID:788366|MAPKBP1:XM_002690804:20_cdna Constitutive 0 NULL GeneID:788366 10 GENE MAPKBP1 NULL mitogen-activated protein kinase binding protein 1 EMBV3_01248 TTTTGGCTTTTCCCGTGGGTCCTTGGAGGGGGGTATCCCTGAGGAGGCAGTCAAAAGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26220 AGTGAACGATGTGACCTCCGTAGCAGATGACTTGGCAGCTGTGGACTGGGAGGAAAAACA Gene GeneID:404187|CTSZ:NM_001077835:823_cdna Constitutive 0 NULL GeneID:404187 13 GENE CTSZ NULL cathepsin Z EMBV3_19407 TCTGGCCCCCGCGAAGGAGCACGGGGCTTGTGTATTGCATACTTTCTAAGGCGGCCGGAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37020 GACCTAAGGCTGAACAACCTGCATGCCTGGAGAAAATACAGTGATAAAGGGGGAAAGGCC Gene GeneID:100336665|LOC100336665:XM_002699807:59_cdna UTR3_Alt 2 NULL GeneID:100336665 X GENE LOC100336665 NULL misshapen-like kinase 1-like EMBV3_04816 CCAGGGCAGCATAAACATTTATAGAAGAAGGGCCTCTGTTATCTGATTGAGTGGATAGTG Gene BVV0102_295676 + 0 NULL GK000001.2:128901498-129009712 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00005207 TCONS_00005214 TCONS_00005209 TCONS_00005211 TCONS_00005210 TCONS_00005208 TCONS_00005212 TCONS_00005213 1 XLOC_001203 Coding TCONS_00005212 XLOC_001203 Coding Coding SLC25A36 1:129005843-129041662 j TSS2581 7157 1 TCONS_00005212_8 190 0.0667877602347352 6 0.800351778435423 8.55799733276353e-05 1.83218870497306e-49 2.46589079554868e-272 1.66502911860763e-51 9.44098255136928e-90 4.20478058325173e-148 1.1648967391536e-37 0.000263961715939113 0.000138841515127768 0.000676685587197915 0.000228076597458036 0.000280675609238612 9.16427094506444e-06 0.00113170714441002 6.30367786381326e-05 0.00372545877606901 0.0023794785103535 0.00376406821466666 3.16791210596043e-35 7.1747937805912e-46 2.54966082348557e-209 0.00221075403225734 0.00208581774610568 0.0021989474383538 2.9210146376203e-06 4.11227482767382e-06 8.9397555359862e-72 0.000223742818864221 0.000630594621255063 0.000931070659444557 NM_001192254.1 SLC25A36 Bos taurus solute carrier family 25, member 36 (SLC25A36), mRNA. 0.0 1222 100.00 0.0944529830934749 NM_001104647.1 SLC25A36 Homo sapiens solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 (SLC25A36), transcript variant 1, mRNA. 0.0 2441 77.56 0.432443761352522 TCONS_00005212_8 sp|Q96CQ1|S2536_HUMAN S2536_HUMAN Solute carrier family 25 member 36; 1e-134 384 96.84 0.994736842105263 1 coding 1 0 1 1 0.403013875658382 0.0296514213704013 0.0218866921427925 0.757612579420264 GCCCTCTAGCGCGGGTGGTGAGCGCTGAGCGGGAGCGGGAGGCGGCCCGGCTGCAGCGCTACGGGGAGGGCCGCGCCGGCTCCTTCTGCAGCCGCGTCTCCGTCAGCTCCCCTCGCCGTCAGTGGGGCGCCGTGCTGCTCCAGGCCGGGGCGGAAGCTGTGGCCTTCGCGGGCGGCCGGATCCGCGTCCCGCCTCAGCGCCCGGAGGACATGCGGCAGAGAGAATGAGCCAGAGGGACACGCTGGTGCATCTGTTTGCCGGAGGATGTGGTGGTACAGTGGGAGCTATTCTGACATGTCCACTGGAAGTTGTGAAAACACGGCTGCAGTCATCTTCTGTGACACTTTATATCTCTGAAGTTCAGCTGAGCACCATGGCTGGAGCCAGTGTCAATCGAGTAGTGTCTCCTGGACCGCTCCATTGTCTAAAGGTGATCTTGGAAAAAGAAGGGCCTCGTTCCCTATTTAGAGGATTAGGCCCCAATTTGGTGGGGGTGGCCCCTTCCAGGTAAAAAAATACATTTAAGTTAATTCAGTTGCGGCAGTCAAGTTTAACGAGAGAAGATGCTGACGAGAAGTCAAGATGATAAGGATGGAGCACTGTGACAGATGGGTGTCAGTAACCATCCAAAAGGATGGGCAGATTGTATCATGTGGAGTGTGAGGACTTCAGTGGTCATTGTCATGTATGACATTGTCATGAAGCAGTCTTTGCACCAAGTCAAAAAAACCAAAAAGGCCTTAATATTTTGTCTTTTTTCTCTGATATCTTTTTATCTTAGGTTGACTTTTTCCATGATAGAACACAGCAGAGTTCACATTCAGAAAATGTGTACCCAGGTCTCTGTATCCAAACAGTGTAGCAGAACCAGATCCCATTATTCATGGGATTTCAACTTCTTGTGGGCTCTTTCTTTTTAAAACCTGATCCAAAATTCATTCTTATTGTGAGGTCTAAAAAAATGTGTAGCGTAAAGCTTGACATGTCACCTTAAACACATCCCCTCTCACCCAGCGTACCTTTCTACACACAGTTAGTCTGCCCTGCCCATAGATAGATAGCTATGATAAAAGTCTGGTTTAAAGTCTTCCTTTATGTTTTTCTGGCTAATTGTGTACATGAAAAGCACAGTATATATGTTTATTATCATTTATATAAATTGAATTCTATTGAACTATTTCACCAAATTTTTCTTGAAGCTTTTTCCATGAAAATCGCTGAGTTTTTTAAAACTTGTATAGTGTGATTGACCCCCTTATTTGTAAACCTTTAGATTTATTTCCAGATTCTTGCTGTTAAAAACAATGGTTTTGGAAACATAGCTGTGCCTTTATCTGTGAGTACTTAAGCAAATATTTTTCTTTAGGATAGTTACCTAAAAGTAGAATTTCTGGACAGAAGGGCATATGAACATTTAAAGTTAGCGAATATTGCTCAGATCCCTCTGAAAAGGCATGCCATCCTTTTATTCTCAAGTAGGGAATTAGTTGTTCTTTATCCACATATTACAAATGTTGGCAACTCTCCATGTATTTTAATACTTGCCAAATAGACTAGCCATGATTTTCACTGTTTTAATACATGTTTTATTTTGGTGCTTTCATGTCCTCCTCCTCGTAACTGTTTTTCATTTGTATCTCTCTTCTGTGAATTACATATGCATATTCCTTGCCCGTTTTCTCATGAGGGTGCATTTTTTCTTATTCATATCTAGTAATGCAGTGTTTATTCCTCTTACTACTTTGATATCATTCAGTGTATCCTTTTTTTTTTTTATGAAATAGAGTGTTTCATCTTCAGTTTTATTGACTTCCGTATTTTCTTAAGCACATTAAAGAAACACACAACAGTGACATTTGCCCCATTTTTACTTGTTTACTCTTTCCCTTCTTAGACAATCAGGATTGTTGGAAAATAACAAGATATTTGATACAGCAGCAAGTAACTCAATGCCCCGAAGGCTATGAACAGTGAGGAGGTAGTTGAATGCGTAAAGTCACAATAAGTTAGCAGGGAAAATATTTACAAATTTAATTCAGTGTTTACAAATGTTAGAGTACCTGATATGACCCAGTGTGACTGATTTCTTTTGCAGTTGTTCTGTCGGTTTAGGGATGCTGTAAACTACTCTCTGTGTAGCATAGATTGATATGTAGCTCAATGTGTCAAAATTGTTGAACATTCGCTTTGATTATTTGTCAGTTCTGCCTTCCTCTCTTCAAAAACAACATAAAATACCCATATCACATCTACTTAGGTGTATTTAACTTACCCTTAGTGCTGTATAGGCCTTTCAGCCTATTCATGTGTTTTCTGATCATCAAAGTCTTATACAAACACTTTTTGTTTCAGTCAGTTGCTGTTAAAATATTGAGATATGAGCATCTGTTTGAGAATGCTTTACATTTAAGTTTATCTTTAACGAGTCAATACAAAAAATACTTTATGGTCTTTTTAAAAAATATGTAGATATTACATGAAAATGTAAATAATAACTTAAGATTATGTTTTTAGATTTCTGGATTCTGAAATAATAAAGATCAATTTATATGCCATTTAAATCTTATGAATTAAGCAACATGCTTATTGACAAAACTTAAATCTTTATTTTAGAGCCATATACTTTGCTGCTTATTCAAACTGCAAGGAAAAGTTGAATGGTTTATTTGATCCTGATTCTACCCAGGTACACATGATTTCAGCTGCAATGGCAGGTTTTACCGCAATCACAGCGACCAACCCCATTTGGCTTATAAAGACTCGATTACAGCTCGATGCAAGGAACCGTGGGGAAAAGCGAATGGGTGCTTTCGAGTGTGTCCGTAAAGTGTATCAGACAGATGGACTTAGAGGATTTTATAGGGGCATGTCTGCTTCATATGCTGGCATATCAGAGACTGTTATCCATTTTGTTATATATGAAAGTATTAAGCAAAAACTACTGGAATATAAGATTGCTTCTACAATGGAAAATGAAGAAGAGTCTGTAAAAGAAGTGTCCGATTTTGTGGGAATGATGCTAGCTGCCGCCACCTCAAAAACATGTGCCACGAGTATAGCATATCCACACGAAGTTGTAAGAACAAGACTGCGTGAAGAGGGAACAAAGTATAGATCCTTTTTTCAGACATTATCTTTGCTTGTTCAAGAAGAAGGCTATGGGTCTCTTTACCGTGGTCTGACAACTCATCTGGTGAGACAGATTCCAAACACAGCCATTATGATGGCCACCTATGAGTTGGTGGTCTACCTGCTCAATGGATAGCACCGCCAAACTGCTACGCTGTAAAGAGGGAAGACCAAAAGAGAAATTGGACCATGGAGCACCAAAGCCAGCATGGCGGACAGAAGGAAAATAGCGTGGGAACATGGAACTATGCCTAAGTGGAAGTTTGCTTGTAGGAATTAAAGTAATTGTAACCACATTACTTAGTCTTTTTAGTAATGTGGGGGGAAAAAACCGTGGCTGCCTCCAAGAAAAAGCCTTTAGAAGCACTCCTTCCTCAAAATTGCCATTTTCTCTGTCACAGCCACAGGATACTATTGGCATTTTGTTGATTTATGGCAACCAGAGTACAGTGTTTATTCCATGAGCACTTTTCCAGTCTTCTAGACAAAGCCATCCGTAACTATATACTAGAACTATCCAAAGAAAGTATTAACGGTTGTAAATTTCTAACATCCCACTTCTGTATAGTTCCTATGAAATTGGAAAGTAACAATACTAGTATTTACATTTCCTTGAGAGGATTTGGCACTGTATTTTAAAGTTAATTGTTTGGTATTAGTAGTCACTGTTTTTGACAAAAGAAGTAGTATCTAAATATTGTGCTTGCTTTTAGTTTAAAAATGTGTTGGTTTCTACTGCTCACAGGTGTGTTATGTTTAGCCCAGTGTGAACACTAAAATTGCCCAGTGTATCAACTCAAATGGTAATAGATTGGGACAAAATAAGCCAGCAAAATGTTGATCTTGGCCATTTTGACAACTTGAGCATGTTCTCTTATCTTGTCTAACCTAATGATACATGAATGAATGCAGTGTCTCTTCAGTGACTTATTAATTATGAAGTTGAATTATCACCCATCATACCTAGGTATCATTTTCTTAAAGTGAAAAAAAATGTACTGCTTCTAGATCTTTCTCTGGTTTCACATTAAGAATTTGAACCTTTGGATTATTTCTGGAAGATCTTCATACATTGCGTTATTTAGTAGAGAAAATGGTAGTTTTCAGCTTTGCCTTTAAAAGGTGTTTTTCTTCTTAAGGCAACATTATATAAGTATCCAGGGCAGCATAAACATTTATAGAAGAAGGGCCTCTGTTATCTGATTGAGTGGATAGTGATCCTAATTGACTTATAGTTTTATAAATGAACAAACTACTTTGCATAAGAAATTTATTCCATCCTAATTTCTTGAATGGTAAATCATAAAAAAATGCAAGTTAATTCAGATTAAGTGTATTAACAAGAGATAGCTTTTACATTTTGCTGTTGAGATCAACTGCACCTTTTAATACTGTATTATATGTATGGCCCTTGTGAAGATACTTGCTGTAAGTCTATAATATTAAAGACTTTTGCTCATGGTTGTTGCTATACTGGTGTATGAAGCTTATACCATTGAACTCCAGTGTGGTACTCATTTCAGTATACATGAACTGTGCATTGTGTGCAATGGCTTTATCTTAAGAATGACTCTTTGTGAATGCACTTTGTGGCCTTTTGGGAGGTTGGGGGTGGGGGGTGTGAGTAGGAGAGGATTCCCATGTTGGATTATTTTTTTAAAACGTTGGTTAATGTATTAGGCAGAAACAGTATTCATAACATTTTTTTCTGGGATTTAGGTATATTGTTTGGGGGATCTTTAATATAATAAATGTTTTAAGTATTCTTATGTGTACTCCAGTGCCCCTAACATTAAAAAACGTAGCATGTCATTGCAAGCTTTCTCTGCTGTCACCAGTGAAACGCAGTGCCCTGTTAAATTCCTCCACCTTCTTAACTTCCTTGTAATCAACAGTAACTGGATGTTTTTGAGGTGCTTCGATTGGAATTAGTATTCCAGTCTATTTGGAGACCAAAGGCAAATTCAGTTTCATTACCTTTGGGATTATTCATATCAGCTTTGACATTTATTGTGAGAAACATGCCAAAAAAAGAAAGCAGTAATAGGGTTTATAACTTAAATCTGTAGTGAAAGTGTCAGCCTATAGTGTTTTGATTTTCAGGTGCCGCTTATACTGCCTAATACAGTGCCATTTGCCTTGTGAAGATCTGTAAACATTAGTTGTATCGAATGTACAAGAGACTCAATAATTTAGTGATCTGAATACCCACAAATGGTTAAGAATGATATGAAAACCAGCAACTAAGGAACATCTTATTTAGTTGTAGCAAATTCATAACAAGTGTCCTTCAAGGATGAACTCATATTCTGTTCCTGTTTGTGTTTGTATTGACCTTGACCTTTTAGTGCATTGTGTTCAGCTTTTAAAAGTGAGTATATTTCTGTGCTGGAAGAAAAGGATCTTAGAGTCTCAGACTTTGTTTCTTTGTGCAACAACTGGAAAGGAGCGATGATGTTTAATTGTTTTGTCCCCCCAAAAGTACAATCTGCTGCAGTTTATGACAGAGATAATTTAACAAAATATATATATATATATATATATAAATTGTATATAAAGTCTGTCTGAAACATTTCTTGGGAGGTGGTTTTTTTTTTTTTTTTTGGGGGGGGTGTAGACATTTAAAAAGAAAAAGCATTGAAACTTTTTTTTATTCTGTGTTTTATTTTCATCTATCAGATAACTTTATTACTGTATAAAGGTAGTCAGCACTCTTCAAATTGGTATGTACTTTTATTTGAGAATCTTCTCAGAAAATGGAATTGATCCTTTCAGTTTAAAGCGGTACACACTGAAGAGCATATTCATAGAGCAGCAGATAAAACTCTGGTACTTCTGGCTCACAGAAACAGTTTACTAGATTTCCAAGTGCACATCTGAGAATCACCAACCTGTGATTGTGGGGTACCACACAGTGCTTTTAAATCCAGGGAAAAAAACTGTCACCAAAGCTTGGTTTTCCTTATGTGTGTTACTTTGCGGAACCAATCTTACTAGATGGGACCCCCAAGTAATTGATTTTTTTAAACTGACACCAAGAGAGAATATCATTTACATTATTTAACTATGTCTCTGTCTCCTAAAACCAAATGCCCATTATGGAATAGCATGGTTATATTAGGACTAGCTGAGTTTGGGTTATTAAGAATAATGAGTGTTTACTCTTTTACTGGAGTATAAATATGTCAGCATTTTTTAGATTTGTTTTAGATCACTGAAAATATTGATTTGACCTTGAAAGAATTAAGTGCTAGGAATCAGTTTATCCTGTAATCTTCCGGCATTGTCTGTGCTGTCTTTTGTTGTTTACATGCCCTTCTGCCCAGACTGTTAGTACTATCAGGACCCCTTTGGGGCTGGTGGATGTAATAGTTCAGCCTTTTTCTCTAGTATTGATCATGACTTCAACATTCCTAAGAATACAGATATTTCTAAATGATTTAAATTGGAAAGGGATTTTAATTAAAAGTATTTAATACAGTGTACAGACTTTCAGCTTACACAAATCTCTTCTCCATTGTGCCCTTACATTTCTCAATCTATACTCTGCTTTTTATGCTACTCCTTTTAGAAACTGAAGATTCCTCTTTTACTCGGTTTTTGTGTTAATAAACATTTTGAATGTGTACCCCTGCATATGTGAACATTTAAATTATGACCTGTCAGTTGTAGCTAAACAACTTCAAAGAGTTGATATTCTTTGACCATTTATGTGAGGTTTGCTATTGCATTCCTGTTATGTGGCTGTAAATTATGTGCATTTACTCTGTATTTATGTTAACTAGCTGAATTTCATTTGAGTTGTTAAAATTCAAAAAATTAAAATATACTTATGAAAATCCAATGTCTCATTTTTTAGTTTCATATAATGTATCCTAATATTTGGTATGGTAAGAATATAATCATACTTTCTTATGATTATGTGTAGAGCAAAAGTGCATTGCCTTTTTTTTTCCAATTGTTAGTGTCCCACCTGCTAGACTTAGTGATAGATGTCTCTGGCAATTAAAAGGTCAAGTGATCCCACT EMBV3_10998 TTGCAATTGGGTTTGGCAAGATCCCGCCCCGTTACAAACTCTGTCTCATTCCCCGCTCAA Gene GeneID:282213|CYP2E1:NM_174530:12_cdna Constitutive 0 NULL GeneID:282213 26 GENE CYP2E1 MGC133529 cytochrome P450, family 2, subfamily E, polypeptide 1 EMBV3_08234 TGAGCGCCGGGCTGCGGAGCAGGAAGAGGACTGGAAGGAGCCAGTCTGGAGACAGTCAAG Variant GeneID:515362|EMG1:XM_002687861:96_cdna 220^295 6 EMBV3_03153 GeneID:515362 5 GENE EMG1 MGC138092 EMG1 nucleolar protein homolog (S. cerevisiae) EMBV3_03924 ATGACGTGATTGATAAAGACAGTCCCTTCTACTATGACTGGGAAGGCCTGCAGCTGGGCG Gene GeneID:100295639|LOC100295639:XM_002698830:72_cdna Constitutive 1 NULL GeneID:100295639 28 GENE LOC100295639 NULL similar to corticosteroid-induced protein EMBV3_36865 TTCCATCCTGGGTCCTGACTCCAAACCTTACAGTGCCATCAAGAAGGGGTTGCTTAGCCT Gene BVT0102_211515 + 0 NULL GK000011.2:61994480-62089337 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00028028 TCONS_00028025 TCONS_00028012 TCONS_00028029 TCONS_00028031 TCONS_00007481 TCONS_00028026 TCONS_00028032 TCONS_00028024 TCONS_00028033 TCONS_00028023 2 XLOC_015387 XLOC_003042 Coding TCONS_00007481 XLOC_003042 NonCoding NonCoding - 1:48264270-48264557 - TSS4558 287 1 0 0.000537276050167752 0.000204235957249969 0.000612634398099723 0.000308632270337162 0.000174894493594306 4.36226257062961e-05 0.000250607945531682 0.0019612674391785 7.7893386434556e-05 0 0 0 0 8.19511356545751e-06 0.000170947447259339 0 0 0 0.000724589535927466 0.000288158155196285 3.52581955947302e-05 0 0 0 0.000519032916262816 0.000429602173904794 0.00059884501457744 0 0 0 0 noncoding AGGGTGTGATCAACCAAAGCAAATAGAAAATAGCAGGACTTGGGGCTTCCATCCTGGGTCCTAACTCCAAACCTTAGAGTGCCATCAAGAAGGGGTTGCTTAGCCTAAGGCCCTGACGTGATGAAGTACACATCGAGACCTGAGCAGAAGCCCAGCTGAGCTCCCAAGTCGTGGGCACCAGCAGGAGAGCACATCCCTGTGAGCCTCTAAGGAGAATTTTCTGAAGAATCAAAGGGCATAAGTTATTGACAGCAAAGGTGTTTTAGCCAACTGACCTCTGCTCCTGG TCONS_00000579 . 3' 959150 TCONS_00000579 . 3' 959436 EMBV3_15447 ACCAACGCGCTGACTCAAACTGTTGCTGTATCTACTCTGAACTTCTGCGGTCCCAATGTG Gene GeneID:514532|LOC514532:XM_002695734:407_cdna Constitutive 0 NULL GeneID:514532 19 GENE LOC514532 NULL similar to olfactory receptor Olfr399 EMBV3_39932 AATTGGGAATGGAGTAAATGTGAGAACTGTTAGTCAAACACCAGTTTTTTCAATAAGCAG Gene GeneID:616883|ZNF782:XM_002689834:35_cdna Constitutive 0 NULL GeneID:616883 8 GENE ZNF782 NULL zinc finger protein 782 EMBV3_11372 TCAGGAACTGCTCTGCCCACCCCCACGACCATGGACCTTAAGAAGCACCTTCCCCAGAGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05655 AAGAGACTTCCAGGGAAATAGGAAGTGCCACCTGAAGACGTTTAGATACTGTGTGTGATG Gene GeneID:613898|CENP-A:XR_082703:301_cdna Constitutive 0 NULL GeneID:613898 11 GENE CENP-A NULL CENP-A protein EMBV3_32225 GTTCCGGGCATTGGGCTCCAAACCTGGGTCCAAAGTAACTGCCCGGAGCTCACTGATCAT Gene BVV0102_045445 + 0 NULL GK000022.2:59711204-59715773 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048812 1 XLOC_028943 NonCoding TCONS_00048812 XLOC_028943 NonCoding NonCoding - 13:49018692-49019337 - TSS35988 645 1 TCONS_00048812_1 97 1 0 1.05470556467492e-05 0 7.41276963642213e-05 0 0 5.77690039552415e-05 0 4.58505571066637e-06 0.000272178487746958 0 8.87282004216321e-07 8.31556057528012e-06 5.93134807224284e-06 3.16030536889996e-05 3.9436128036391e-05 2.04741304973556e-05 1.28699791788864e-05 2.91754561426782e-05 0 0.000111866731292832 1.68651177652844e-05 5.75244607176062e-06 7.11165666945104e-06 0.000356952247466072 0 0.000255784860341289 3.91475823134471e-05 0 1.75618616030724e-05 5.20440340619046e-05 XR_236255.1 LOC101905928 PREDICTED: Bos taurus uncharacterized LOC101905928 (LOC101905928), 6e-08 62.6 72.52 0.178294573643411 0 noncoding 0 0 0 0 0.0425495311291958 0.704658756308425 -0.00959511421808806 0.842321262614134 CCTGGGCGTTTGGGCTCCCTAGCAGAGCCGCAGCGCAGGGGAACCAGCCCATGATCAGTGAGCTCCGGGCAGTTACTTTGGTCCCAGGTTTGGAGCCCAATGCCCGGAACGCGGGAGAGAAGAGGCTGGCTGCCGGCGGGTGCTTGCAAGGCTGTACTGGGAAGGACCGAGTGAGCTTCCACACCGGCGGAGCTCCAGCTCTGCGCCCAGGCGCGATAGCACAGAGCCCCGGCCGAGAGGCTGCTCTGTGCCGAGCGAGCCTCCCCAAGGCCTGCCCAGCTTCTGGCGTTCGCGCCCGGGAAGGAGCAGGCTGCGGGAGTGTGGGAGCCGTGAGTGGTGCCTGACTGCTGCCTCAGCTCAGCTCTCGCCTTCCCTTCGGACCTAGGAGCCAGGCGTCCTTGCAGAGGGCTTAGGGGCTGGGGGTGTGCACACTGCCAAAGCCTCCCTCGGGGAGAGCTCTTTCCGAGGGAAAGGAAGCGCCCCAGGCTGCATTCCCAAGCTGGTGCTTCCCCGCCCAGACTAAGCGCCGCACGGAGGGAATCAGGGTCCCGGTGCCCCTGGCTTGGGGAGGCAGCTCCACAGCCAGAGTGTTGCTCCGTTTGTGCCCAGAAAGCGCCTGCCAGACCGGGCCTTCCCTGGAGCTGT TCONS_00045373 . 5' 339981 TCONS_00045373 . 5' 339981 EMBV3_43001 CCTCCTCTCACAAAAACAAACTTTTCTGTAAGACAGTATAAGCTATGGTGAAGGGCTCAC Gene BVT0101_011980 + 0 NULL GK000005.2:64815381-64836226 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00192271 TCONS_00192278 TCONS_00192279 TCONS_00192284 TCONS_00192276 TCONS_00192283 1 XLOC_117149 Coding TCONS_00192271 XLOC_117149 NonCoding Coding - 5:64821091-64824347 - TSS143928 1619 1 TCONS_00192271_3 51 0.111179740580605 3 0.503533026113671 0.000622144216230351 0.00238875095373862 0.000505203968401585 0.000290605877001773 0.000653993399206451 0.00101914001560965 0.000469519307612735 0.000887868249120358 0.000171724835635665 3.63133212758537e-07 5.8822460230392e-08 6.38727791052423e-22 0.000478121405057226 0.00377947107619902 0.000837562044551956 1.93482095497676e-24 0.000743816573593099 0.00030978637730311 0.00128320342752846 0.00190842391759259 0.000804497503988081 1.85778861362893e-21 1.31918894318891e-41 5.70487362450955e-53 0.0015727534505254 0.0022554597778404 0.00117332351461568 9.72044007208435e-67 1.63561829065213e-05 0.000173390544226913 XM_005198315.1 GAS2L3 PREDICTED: Bos taurus growth arrest-specific 2 like 3 (GAS2L3), 2e-139 500 100.00 0.170475602223595 XM_005268804.1 GAS2L3 PREDICTED: Homo sapiens growth arrest-specific 2 like 3 (GAS2L3), 3e-17 95.1 83.16 0.0555898702903027 0 noncoding 0 0 0 0 -0.155821576717633 0.765116619281541 0.0433468604785226 0.496131962095511 CGCCAGACTTGTGTGACCCTAGGCAGAGGAAACAGACTAGTCCCTTGATCCAGACGCACGCAGGTCTCGTGCTCCCTAGAGGCCTGGAGGCGGGGCGGGGCCTCCAGCCACGGCCCCTCTCCGCCTCCTTCGAAACAGGCCGCGGCGATTGGTTCCTTCAAAACGGGCCGCGGCGAACCCTGAGCCTGAGGCAGCCGCGGCGGCGGTTGGGTAGGGGCGTGTCGGCCAGGCACAGATTGAGCGAGATGTTGCCCAGCAAGAAGTGACCGTCCTGCGCCTGTGCGGATTCCCTTTAGGAGGAGATTGGAATGGTTTTGAATGAAGAAGTGGAAACTGGTGGTAGTCGTCTGGTGTAGATCCCGATACGTGTCTGTCTGACTCATCTGTTTCAAAACCTCATTACAAACCAACGGACTTTGCGTGATGAGGAAACTGAAGCCCAGAGAAAGAAATGAAGCTACTGAGGTTCACCCAGAATTCAGTCTAGACTGTCTCACTCCAATGTCCAGCCCCTTTTTTTAATCACACTACTCTTGCATTTATATACCCAGATTTAAGCTTCTTTGCACAAAGTTGTTTGTATGGCCCAGGTTCATTTTTCCCATGGGTTTCAGTTCATTTTGCCTACTTCATTAAAAAATAGTGGTAAGTAATTTGTGATGGTGAATCAAAGTGTGTGATAAAGGAATAATGTCAACAGTATACTGCTATTACTAAAAAACGAAATGAGTCCAATGACGTTTGGAGACTTGGTAGGTTTAAAAGTAATGTTTCCTAATTTATATTTTCCCATTCAGTTTTTTCGTATTTACTGTACTTTTTATTAAGCAGCACTCTTTTTGTTTTTTTCTCTGTCAATTTCAATTTAAGTTTGGAGATAATGAAAGTTCAGTTATTTCAGTAATTGTTTTTCAAGCTGACTGTTGTGAGGAAAGGGGTTAAGGTTAATGCATACATACTGTAAACTGGCTGTACTTCTGTGTGGGTGTGTTTTACTTTCTTCCTATTATTTGTTTCTCCCTCTACTTTGTTATTTTTTAAATTCTTAATGAAACTTGAAGTGTACATAGTATTTGAGAGAATAGGAAACTTGAGTCTGTCAGTCAGTTGTCTCACTTTGAATTTCCCTGTTTTAATTGAAATGTAACTACCATAGAGAAATGCCTCAGAAGTAATGTTTACAAGATGCAGCCAATAATTATAATTGTTATCTCTTCAGTGTTTCTCCTTCTAAAAACTCAAAAAGTTTTCTCATATTGCATTGTTACAAAATAGGGGTTTTAACAGAAAGTTGCTATGTATCTTGTCAATGAATTACCAATTTTCAAAGAACTAAAATATGATGAAATGTAGCAGATACACTAAATGCAGTTTCATTTTTACTGCTGTAAGGGTCTTTTACAATATTATGACCATCAGTCATATGTTAGATATTGCTGAAGTGCTGACTGGTAGAGATTTCTACCTCCTCTCACAAAAACAAACTTTTCTGTAAGACAGTATAAGCTATGGTGAAGGGCTCACTTTACATAGAATTTTAAATATTGTGACTTTTGTTTTTCTTTGGATGACTTGTTAATGTTTTTGATTGCCAAAATAAAATTGGCTGTTGAAAAAAA TCONS_00192277 TCONS_00192282 s 5' 0 TCONS_00192277 TCONS_00192282 s 5' 0 EMBV3_17571 CCCAGCATTCACTGCAGCACTGTTTACAACAGGCAAGACACAGAAGCAGCCTAAATGTCC Gene BVV0102_310416 + 0 NULL GK000007.2:74127288-74185034 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05467 GAAGACTTCGCCGCTCGGGGCCGCAGCCTGTTGGGGAAGGCGGGCATCATGGCCTCGGAT Variant GeneID:505994|NCDN:NM_001045931:74_cdna 87^154 1 EMBV3_15630 GeneID:505994 3 GENE NCDN MGC128555 neurochondrin EMBV3_18863 GTTACCATGCACAAGCGAAGGCACACTGGAGAGAAACCATATTCTTGTAAGGAACGTGGG Gene GeneID:100139345|LOC100139345:XM_002685011:155_cdna Constitutive 0 NULL GeneID:100139345 1 GENE LOC100139345 NULL similar to mCG67939 EMBV3_43595 CATCCTGTTTCTGTATGGCATTGTCCTCACCCTGCTCTACTGCCGACTCAAGTTGCAGGT Gene GeneID:282226|FCER1G:NM_174537:194_cdna Constitutive 0 NULL GeneID:282226 3 GENE FCER1G NULL Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide EMBV3_19245 GGCTCAGTCGTGTCCGATTCTTTGAGACCACATGGACTTCAGCACACCATGCTTACTGTC Gene BVV0102_315725 + 0 NULL GK000027.2:25416077-25422501 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_18081 AGGTGAGCATGCAGGGCGAACACATCGCACCGCAGAAGATGATGCTCTACCCGGTGCTCA Gene GeneID:100299951|LOC100299951:XM_002696854:706_cdna Constitutive 0 NULL GeneID:100299951 21 GENE LOC100299951 NULL similar to hole protein EMBV3_35532 GAGCGTGGACGCCGAGACTCCACGGGGCTCGACCCGGCGCGGGAGCCCGAGAACTTTCTT Gene GeneID:100335393|LOC100335393:XM_002694174:615_cdna Constitutive 0 NULL GeneID:100335393 16 GENE LOC100335393 NULL hypothetical protein LOC100335393 EMBV3_23456 TGAAGATCAAATGCTGGAACGGCGTGGCCACTTGGCTCTGGGTAGCCAACGACGAGAACT Gene GeneID:616275|ANAPC11:NM_001113724:132_cdna Constitutive 1 NULL GeneID:616275 19 GENE ANAPC11 MGC127621 anaphase promoting complex subunit 11 EMBV3_13476 CCGAAATATTGAAATGGTGTCATGTTGTACCATTTGCACTGTGAGCAAATGCTAATACAG Gene BVV0101_029086 + 0 NULL GK000008.2:70480014-70503687 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28736 CTCTCAGCCATTCCTCAGTAATTGTCTATTCTCCTCATGTGGGGCTATCCAAACTTAGCC Gene BVT0102_208857 + 0 NULL GK000030.2:115080037-115216468 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_37250 TGCAAGGCCAACCCCTCTGGAATCTTAACCCCACAGAGAGCCAAGTAGCTGAAACCTAGA Gene GeneID:508559|EFS:NM_001098910:98_cdna Constitutive 0 NULL GeneID:508559 10 GENE EFS MGC155188 embryonal Fyn-associated substrate EMBV3_43658 AGGAACTCACAGTCTAGTGCGGTAGACGGTGGTCAGCAGATGGCATCCTACCCACTGAGA Gene BVV0102_383137 + 0 NULL GK000025.2:2386286-2405865 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00145940 1 XLOC_088980 Coding TCONS_00145940 XLOC_088980 Coding Coding PKMYT1 25:2381945-2401058 j TSS109246 2672 1 TCONS_00145940_5 497 0.0224550898203593 12 0.860820426956886 4.16336774079556e-07 0.000223945023668374 0.000333067326053804 0.000205579452889636 5.63002999713769e-05 6.95707207937201e-05 8.65603684297392e-05 7.61856655817421e-13 3.17911521278629e-09 2.85908288003269e-20 9.77320627710944e-09 1.53123505505629e-08 0 2.38739227976475e-26 7.43400783201403e-14 1.10704161556639e-30 4.64687601726036e-05 1.00520563335871e-07 3.01934334100288e-08 1.4693066015265e-14 2.83877712803331e-31 4.14944342750148e-10 0.000179508576940615 0.000358425566995523 7.63246720564325e-22 1.75368344378574e-12 8.86331966363338e-05 9.07485423693765e-11 9.37710521453466e-31 8.30624346592949e-29 XM_005196844.1 PKMYT1 PREDICTED: Bos taurus protein kinase, membrane associated tyrosine/threonine 1 (PKMYT1), transcript variant X2, mRNA. 0.0 3815 100.00 0.791167664670659 XM_005255675.1 PKMYT1 PREDICTED: Homo sapiens protein kinase, membrane associated tyrosine/threonine 1 (PKMYT1), transcript variant X2, mRNA. 0.0 1988 84.49 0.665044910179641 TCONS_00145940_5 sp|Q9ESG9|PMYT1_MOUSE PMYT1_MOUSE Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase; 0.0 831 86.72 0.997987927565392 3 coding 0 0 0 0 -0.126479902780017 0.429619620572266 -0.00248929865658878 0.962104218852885 ATGCGTGGCTACAACATTTGGTGCTTTGGCTGGGAAACTCCTCACTTTGAGGAGATAAGTCCCATTTGGGACTACTCCGAGGCCTTGCGGCTTGAATTTTCTAGAGGGGAAAGGATTTGGACAAGGATGACCTGCCCTTCCCCCATACTGGATGATGATGTGCCCACCGCCAGGACCCAAGGCCACCGTAATGCCCGATCCAGGGCCAGGCTCCGATGCCGGTGGCAGAAGCCTCTGGCCAACACTTCCAGGATCCGCCTCCAGCTGAACTTCCCAAGCTATACCCGTCTCTCCTGGAGACTTAGCGCCTGCGCAATAAGAGCGCTGGGCCGGCGGCACGGCGTCGACGACGCGCACGCAGGGACGTTGGGGCGGAGCCCCAGCAGGCTGGGCGCCTCTGATAGGCCGCATCGGGGAGGCGGTAGGGGTAAGAGGCGTTCCTGGGCGGGGCCTCGAGGCCGGTTTGGAATTTTTGGCGCGAGCTGGGTCCGCGCGCGTTCACGGGCCGTTCCCCCTCGAGAGTCCCCCCGCCCGGGTGTGGGGAGCGGTGGGCCGAAGACCGCGGCCCGCCTGACCGCCCCGAGGTCTCCCGCGCCTTCCGCTGACCCGGAATCTGGGACTTTGCTGAGCTGCGCCCCGCCCACCCGCCTCAGGGTTTCCCCACGCCCACGGAGGTGAATCAGCTTCGGCCCTGCCCTGGAGGAACTCACAGTCTAGTGCGGTAGACGGTGGTCAGCAGATGGCATCCTACCCACTGAGAGGGTGCTCCAGGTGCCGCGGCCTCCATGCCTAAAGCGGAGTGTGTGTGTGGTGTCGATGTGGCTGTCTTCTGCAGCCTCTTTGGGGCCACAGGACCAAGCGCCATTTGAGTGACTCACCATACTCTGCCTCCCGGGGCGCCTGTGCTGGACATGCTCATGCCCGCCGAGGGCACCCCGCCACCCCTGGGTGGCACTCCCGTCCCAGTCCCAGCCTACTTCCGCCATGCAGAACCTGGCTTCTCCCTCAAGAGGCCCAGAGGGCTCAGCCGGAGCCTCCCACCCCGGCCCCCTGCCAAGGGCAGCATCCCCGTCAGCCGCCTCTTCCCTCCTCGGACCCCAGGCTGGCATCAGCCCCACGCCCGGCGGGTGTCGTTCCGGGACCAGGCCTCTGAGCCCCTGCAGAGCCCCGGGTATGACCCAAGCCGACCAGAGTCCTTCTTCCAGCAGAGTTTCCACAGGCTCGGCCGCCTGGGCCACGGCTCTTATGGGGAGGTCTTCAAGGTGCGCTCCAAGGAAGATGGCCGGCTCTATGCAGTGAAGCGCTCCATGTCGCCGTTCCGGGGCCCCAAGGACCGGACCCGCAAGCTGGCCGAGGTGGGTGGCCATGAGAAGGTGGGGCAGCACCCGCGCTGTGTGCGGCTGGAGCAAGCCTGGGAGGAGGGCGGCATCCTGTACCTACAGACGGAGCTGTGTGGGCCCAGCCTGCAGCAGCACTGTGAGGCCTGGGGCGCCAGCCTGCCCGAAACCCAGGTCTGGGGCTACCTGCGGGATACCCTGCTGGCCCTGGCCCACCTGCACGGCCAGGGCCTGGTCCACCTGGACGTCAAGCCTGCCAACATCTTCCTGGGACCCCGGGGCCGCTGCAAGCTGGGCGACTTTGGGCTGCTGGTCGAGCTGGGCGCGTCGGGAACTAGCGAGGCCCAGGAAGGAGACCCCCGCTACATGGCCCCCGAGCTGCTCCAGGGCTCTTACGGGACAGCAGCAGACGTGTTCAGCCTGGGCCTCACCATCCTGGAGGTGGCATGCAACATGGAGCTGCCCCGCGGTGGGGAGGGCTGGCAGCGGCTGCGTCAGGGCTATCTGCCCCCTGAGTTCACGGCTGGGCTGTCCTCTGAGCTGCGTTCTGTCCTCGTCACGATGCTGGAGCCTGACCCCAAGCTGCGGGCCACCGCCGAGGCCCTGCTGGCCCTGCCCGTGCTCAGGCAGCCACGGCCCTGGAGCGTCCTGTGGTTCATGGCCGCCGAGGCCCTCAGTCGAGGCTGGGCCCTGTGGCAGGCCCTGCTCTCCCTGCTCTGCTGGCTCTGGCACGGGCTGGCGCACCCCGCCAGCTGGCTGCAGCCCCCGGGTCCGCCGGCCACCCCACCTGGGTCGCCGCCCTGTGGCCTCCTCCTGGACCGCAGCCTCTCCAGCACCTGGGACGACGACAGCATAGGGCCCTCGCTGTCTCCAGAGGCCGTTCTGGCCAGGGCTGCCAGCAGCACCTCCACCCCCTGCAGTGGCTCCCCTGCCCCCCGGAGCAGGCACACGCCAAGGGATGCTCTGGACCTGAGTGACATTGACTCAGAGCCCCCTCGGGGCACCTTCCCCGCCTTTGAACCTCGGAACCTCCTCAGCCTGTTTGAGGACTCCCTGGGCCCGAGCTAAGCCCACTGGCCCAGGCTCAGTGCTTTTTAACCTCTTAGCCCCTCCCTTCCATCATCCTGGAGGCTGGGGTCCCTGTGTGGACTCCAGTGGTCCCTTCTGCCTGGCTGTGTCTAATAAAAGGTATTTGAATCTTGGGGCGCACCCAAGCTTGCTTGTGTGGCAACACAGTGCTTCCTGCCCCCTTTTATTGACGTCGCCTAGGGCCTGAGGCCCCCCGGGACAGGCTGAGCTCTGTTCTAAGTCCCCAAGTCCCAGGCCAGCAGATGA EMBV3_02975 GCGAGAGACTGCTCTGGAAGAAACTCATAGATTACTGCAACAGTTCCCCCTGGACTTGGA Gene GeneID:537655|LOC537655:XM_002700245:2_cdna Constitutive 0 NULL GeneID:537655 X GENE LOC537655 NULL similar to dystrophin EMBV3_27659 CCAGCCCCGCCAAGCTGGAGTCCATTGACGAACCCATCTGCGCTGTGGGCCACGGCGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28846 CATATAGTTCCACATTATATCAATGCCCTTTGCTCTTTGTCCTGATGCTACAAACGTTCC Gene BVT0102_442927 + 0 NULL GK000019.2:63627089-63675905 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16785 GCCTTTCGTGTAATTGGAGGCCTTACATCTCATCGGAAAATTCATACCGGAGAGAAACCA Gene GeneID:785630|LOC785630:XM_002695286:68_cdna Constitutive 0 NULL GeneID:785630 18 GENE LOC785630 NULL similar to zinc finger protein 665 EMBV3_00549 CTGCCAGCGAGAAGCAGCTGACCAAGTCCAATGCACCAAGAGTCAAAGCCAAGATCATTG Gene GeneID:281785|GLUD1:NM_182652:8_cdna Constitutive 0 NULL GeneID:281785 28 GENE GLUD1 GDH MGC127177 glutamate dehydrogenase 1 EMBV3_22037 CAGCCTCGGTCTGAGTGGACTATCCTGCAGAAACTCCAAGTGAGGAAATTGATAATAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36552 GCAGATGGTGATCAAAGAGATGCAAGAGACCGGATAAAGAGAGCATGTGTGTGTAAAGGC Gene GeneID:505349|LOC505349:XM_002687015:61_cdna Constitutive 1 NULL GeneID:505349 4 GENE LOC505349 NULL similar to T-cell receptor beta V3 EMBV3_40481 TGGAAAGGTCTTAGCCCCAAAGGAAGCAGTAAGGATGTTGCTGTCCCAGCCTGGAGTCTT Gene GeneID:508406|MUL1:XM_002685726:443_cdna Constitutive 0 NULL GeneID:508406 2 GENE MUL1 NULL mitochondrial E3 ubiquitin ligase 1 EMBV3_06999 CTGTGGCCATCTTTGTGGCCATCTTGCTATTCATCATGCCTTCGCAGAAGCCCAAGTTCA Gene GeneID:507000|SLC13A5:XM_002695764:237_cdna Constitutive 0 NULL GeneID:507000 19 GENE SLC13A5 NULL solute carrier family 13 (sodium-dependent citrate transporter), member 5 EMBV3_11810 TCCCAGGGGATGCCACCTCGGCAGAAAAATGATGCTGTTCCATTAACATCTGACACGGAT Gene BVV0101_044878 + 1 EMBV3_40957 GK000008.2:86424892-86491136 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39394 CTCTCCGGACACCAGGATGTCTTCAATAAGGTGACTACACGGACTTCTATTCCTCTCGGC Variant GeneID:508724|FAH:NM_001098912:18_cdna 210^381 1 EMBV3_22426 GeneID:508724 21 GENE FAH FAA MGC159789 fumarylacetoacetate hydrolase (fumarylacetoacetase) EMBV3_04037 CAAGAAGGAAATTCTGAGCAAGCAGAAAAAGTCTATAAAACCCTGCGAGACGCCGTGGTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27159 ACTTCCCTGGTTCATACAGCCTATGCCATGCATTTTCCCATTTGTCACCCCCGAGAGATC Gene GeneID:614592|LOC614592:XM_002683645:3_cdna Constitutive 0 NULL GeneID:614592 7 GENE LOC614592 NULL similar to olfactory receptor Olr1414 EMBV3_12254 TCAGATAATGTTTCTATAGCCCTCTGCAGTTGGAGACGATGCTCTGGAGGATGTACAGGC Gene GeneID:533820|MEGF9:XR_083749:15_cdna Constitutive 0 NULL GeneID:533820 8 PSEUDO MEGF9 NULL similar to multiple EGF-like-domains 9 EMBV3_11572 GTCTGCTGTGATCTATTTAAAATGTGCTGCTGTTTGTTCTGCTGTTACTGTTCACGCTGC Gene GeneID:518522|OSTM1:NM_001075776:29_cdna UTR3_Alt 3 NULL GeneID:518522 9 GENE OSTM1 NULL osteopetrosis associated transmembrane protein 1 EMBV3_03057 TTTAACCTTTAGAAGCCTTTTGGTTCCTGGGAAAATGGCAGGTGGCTGAACGTCCCCGAC Gene BVT0102_095276 + 0 NULL GK000021.2:26962833-27054891 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118946 TCONS_00118947 1 XLOC_072777 Coding TCONS_00118946 XLOC_072777 Coding Coding ARNT2 21:26811820-26966820 j TSS89206 6048 2 TCONS_00118946_3 387 0.0196759259259259 18 0.961096523203375 0.000302183326798073 0.000116939721070834 1.66977782122965e-08 0.000516838332038573 0.000285241278486164 0.000464993072359725 0.00127449063039395 0.000867971609937825 9.09022945318251e-06 1.70714843797846e-07 4.43253562720137e-07 2.68695968675211e-05 4.60459110768009e-05 0.000100260298662933 8.02132042328525e-05 5.0410702670309e-06 2.06662416177018e-06 4.62204526645557e-06 0.00121462934111778 0.000210953576481174 5.20876099965378e-05 1.23159825540516e-07 1.52258486145013e-06 6.81578661746155e-05 0.000667697718154959 0.000363914824571169 0.000341738225779704 5.31370405607895e-08 1.42466634324834e-05 0.000142125378217181 NM_001206705.1 ARNT2 Bos taurus aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2), mRNA. 0.0 1.074e+04 98.81 0.99917328042328 XM_005254811.1 ARNT2 PREDICTED: Homo sapiens aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2), transcript variant X1, mRNA. 0.0 2911 82.17 0.468584656084656 TCONS_00118946_3 sp|Q9HBZ2|ARNT2_HUMAN ARNT2_HUMAN Aryl hydrocarbon receptor nuclear translocator 2; 0.0 743 96.68 0.997416020671835 4 coding 0 0 0 0 0.046163571149734 0.700376906940497 0.02053552473745 0.656037102801547 TACAGAAATGGCTTCAGACATCCCTGGCTCAGTGACGCTGCCCGTCGCCCCCATGGCGGCCACTGGACAGGTGAGGATGGCAGGGGCCATGCCCGCCCGAGGAGGAAAGCGGCGATCCGGAATGGACTTTGATGATGAAGATGGCGAAGGTCCCAGCAAGTTTTCAAGAGAGAACCACAGTGAGATCGAGAGGCGGCGGCGGAACAAGATGACTCAGTACATCACCGAGCTCTCGGACATGGTTCCCACGTGCAGTGCGCTGGCCCGGAAGCCTGACAAGCTCACCATCCTGCGCATGGCCGTCTCTCACATGAAGTCCATGCGGGGCACCGGGAACAAGTCCACGGACGGTGCCTACAAGCCTTCGTTCCTGACGGAACAGGAACTGAAGCATCTCATCCTTGAAGCGGCTGACGGGTTTCTGTTTGTAGTGGCAGCTGAGACGGGCAGAGTGATTTATGTGTCCGACTCTGTCACCCCTGTGCTGAATCAACCCCAGTCAGAGTGGTTCGGGAGCACCCTCTATGAGCAGGTACATCCTGACGACGTGGAGAAGCTGAGAGAGCAGCTGTGCACCTCAGAAAACTCAATGACAGGCCGGATCTTGGACCTGAAGACCGGGACAGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGAATGTGCATGGGTTCCCGGAGGTCCTTCATCTGCAGGATGAGGTGTGGAAATGCTCCTTTGGACCATCTTCCTCTAAACAGACTAACCACCATGAGGAAGAGGTTCAGGAATGGCCTTGGCCCTGTGAAGGAAGGAGAAGCCCAGTATGCTGTGGTCCACTGTACAGGCTACATCAAGGCTTGGCCGCCAGCATGCTTTGGCTATTTGACCATTCCAGGTGACCAGCTCTCCTGTGTGTATGGACATGAGTGGGATGTCGGTGCCCACAGAATTCTTATCACGGCATAACTCTGATGGGATCATCACGTTTGTGGACCCAAGATGCATCAGTGTGATTGGCTACCAGCCTCAGGACCTTCTAGGAAAGGACATTTTGGAGTTCTGCCACTCTGAGGATCAGAGCCATCTTCGGGAGAGTTTCCAGCAGGTGGTGAAGCTGAAAGGCCAAGTGCTGTCGGTCATGTATCGGTTCCGCACCAAGAACCGCGAGTGGGTGTTGATCCGCACCAGCAGCTTCACCTTCCAGAACCCGTATTCTGACGAGATAGAGTACATCATCTGCACCAACACCAATGTCAAGCAGCTCCAGCAGCAGCAGGCAGAGCTGGAAGTGCACCAGAGAGATGGGCTGTCATCGTACGACTTGTCGCAGGTGCCTGTCCCCAACCTGCCAGCCGGAGTTCATGATGCAGGGAAGTCCGTGGAGAAGGCAGATGCAATCTTTTCCCAGGAAAGAGATCCGCGGTTTGCCGAAATGTTTGCAGGAATCAGTGCATCGGAGAAGAAGATGATGAGCTCAGCTTCTGCGGCAGGAACACAGCAGATCTACTCCCAAGGAAGCCCATTCCCTGCTGGACACTCGGGAAAGGCCTTCAGCTCTGCCGTGGTGCACGTGCCTGGAGTGAACGACATCCAGTCCTCGTCCTCAACAAGTCAGAACATGTCCCAGATCTCCAGGCAGCTCAACCAGAGTCAGGTGGCCTGGACAGGAAGCCGTCCGCCCTTTCCAGGACAGTCCAGCAAGACTCAGTCTTCTCCCTTTGGGATCGGAACAAGCCACACATATCCTGCAGACCCCTCGTCCTACAGCCCTCTCTCCAGTCCGGCTACCTCCTCGCCCAGCGGGAATGCCTACTCCAGTCTGGCCAACAGAACTCCAGGCTTCGCTGAGAGCGGACAGAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGAAGTTTGGTCGCAGTGGCAAAGCCAGCACCACGGACAGCAGAGCGGTGAGCCGCACTCCCACCAGCAGCCCGGTCAGACTGAAGTGTTCCAGGACATGCTGCCCATGCCCGGAGATCCAACCCAGGGGACCGGCAACTATAACATTGAAGATTTTGCCGACCTGGGCATGTTCCCGCCATTTTCGGAGTAGCTGCGGGCAAAGCCAGGCTTCACAGAGCAGTGTCCCCCCTGCTGTGACGTCGACGCCATCGTGAACGGGGGCCCCCCTTGCCCTGCTTGTCCTGTGGCAGGAACCCCCCCAGCAGAAGACACCTCATTTCCCCCCGCCCCCGCCGTGTTCCCCCTGCCACTGTCGCATTGCTCAGCTTCTAACCCTCAGCAGTGGCTGCTCCGCCACCAAACAGGAGCCTGGTAGACGTCAGGGGTGGGTTTATTTATTGTATTTTACTTGTGTGTGCTTGGGAGGCCGACCCATTGGGTTCCTAAAATCTGGTTGTGAATAATCTCCTATCGGACAATTTGTGTCTATGTAAAGTTCACTTACAGCCGAGAGAGCCCAAGCGGCATGCCCAGGCCTGCCCTGGAAGCTGGAATCTGGTTTCTCCTGGCTTCTAACTTCTGTGTCCGCATGGGGCTCAGGGAGTAGTGGGGAGAGAGGGCACAAAGCCTGTGTTCTCAGAGCTGGAGGTGAGCAGCCGAGGACCCCCAGGTGGACGCCGGCTCCTCTGTCTCCCGGCTCAGCCGCATCTGTCCGTCCGTCCATGTTGCCATGAGGCGTGTACTTTGTGCCACGTAATGTGAATCCTTGTCCTGAAGGATGTGCTGTGCCCATGTCTGTTGTGTGTGGCAAGAGCGAGAGTCTAGAATCCAGGGTGTGTGATGGAGGTGGAGCCCCAGCCAAGCTGAGGAGGACACCCTGACCAGAGGGAGCCAGGCCTGGGGCCTGGGTTCCAGGCAGACAGGCTGAACTGAGCAGGCGGGCACTTGACGGCGACCCCAGGAGTCCCGGCCCAGAGCTGCTTGCTCTGCTAGGTCAGTTCTTCAGTCCAGGCAGGGGACAGCAGCTTCTCAGGAGGGGCAGAGGGCGGGTCTTCGAGGGAGAGGACTTGGGCTCCAGTTCTGGTTTTGCCACCCCCCCCCACCCCAGGTTGTCTCAAGACAGAGTGAGAGCTGACTTCTAGAAGCTTGCCTGGCTAACTTCTGAGCCCCTGGTCCCTGGCTTGTTGTTTCTCTCAGATCTGAGATGATTCCCCATTTTTACTTACCTCCACTCCATCCCGTGCCCTTTACAGTAAGGAAGGAAACTCCTGTGTCCTCTTCTTTTCCCAATGGTCCCCCTCCTGTCCTGCCTCCCCATCCCATCAGCTCACCGACACCCATAGGGAGACAGGCTACCTACCCGTGGCCACCTCGCGGCAGGCAGAGGAGCCCATGCCCCCTGCAGGCGCCTGGCTCGGAACAATCCTTGTACCCCTCCTCCTGGGGTTCTGAAGGGCCCGGCGGAGTGGAGTCGCTTCTGGGCTACCTGAGCCAGGAGTGAGCCCCATCTGCAGGAAGGAGCCACGTGGAGAGTGTTTGCTCTCATCCTCTGAAAACTGCATCAACCCCAGCGCTGGCCAGCATCCAGAGCGGATGGGCGTTCATTCTGGCCTGGGAAGCTCCAGCTGTTAAAGTCCAGCATTGTTCACGAGCTTACCCTTGGCTGGTAGCCAGCTTTGTGTGATCCCAGGTCATGGGCTCTAAATTAAAACTGACCTGACAGTTTCTAGAGTGGTTTTTAATCTTCGTGTATATAGTGGCGATTGGATTTGGGGTTTAGACGCACGGATGTCATTTTTAACCTTTAGAAGCCTTTTGGTTCCTGGGAAAATGGCAGGTGGCTGAACGTCCCCCGACCCTGACAGAACCAAGACCCAGAAGGGGCCTCCCCTGGGTGTGCCCCGCTCCTGGGGTCACCTCTGCCCCCCCTGCAGCCTTGAACTTGTCCCAGACTGTAGACTTAATCATTTCCCAAGAAGAGACACCAAAATAGCTTTTGGATCAAAGAATGGGTTCTCGGTGAAATGAAAACAGACTTCTTGTGACTTTGAGTCTATAAATTTGAGTTTGAGGGGGGAGGTATGTTTGTCTCTTCTGGTTTTAGAGGGAGTTTGGGGGTTTTCTAAGGTGCACACACTGATTGGCATGCTGACTGGGAGCCTGCCACCCACCCGGGCTGTACTGGGTGCTGAGGGGATGCAGGACAGAGGAGAACAGTCTTGCCCCCAGGACCTTTCATCTACTTACACAATGTCTAGGATGAGGACCTCTCAGTTCTTAGTCCTAGTAGGCAAGGATTCCTGAGCAAATGAAAGCCAGATGTAATGGAGAGCATCATAACTAAACAGCCTCAACCTGACTTCCCTCGTGGTCCAGTGGTTAAGACTCTGAGCTTCCACTTCTGGGGCCTGAGTTCGATCCCTGGTCAGGGAACTAAGATCCTACACATAGCACAGTGTGGCCAAAAAGAAAATAAATAAGTAAGCCCACCTCCCCTCCCAGCTGTGTCCCAGGAGCCCTGGAGGGGTGTGTGGCTGCAGTGTGACTGGCAGTTTGAGTTTTGTTTTTTGTATTCCCCATTCCACGCTTTGATTGTGAGTGTTAGAAGCACCATGTGGCCACTCAGAAAACAGGGAGCACCCAGAGGACCACATGTCTGAGGGATGCTTTCTGCCCACCGCCCCCCACCCCCCCACACACACACAAGGAATTTTGAGACAAATGAGCATTAAAGTCCTGGAGAGCCTAGTAATGCCAGTTTGTAGAAGCCTTGATCCTGCCCTGCCAGGAGACCAGGATGCCCATGGACCCTGCGTCAGCGTGGCCTTCAGCTCAACTTCCTTTCCTATTGGAGATGGACGAAAAGCTGGATTGGGAAGGGGAACAACACTAGGACTTTGGCTCCAGGACTGTCTTCCTCATTCACACCTCATCTTGCATCTCCCAGGCCTTCCAGTGGCTTCCTTTGGCTGAGCAAGCAGAAGGCTCTCCCCTCAAAAAAGCCATGTGGTGGCTGCCTGAACCATTGGTGAGCACACAGACACAGCCACGCTGAGGCTTGGCCAAGGCTGGGTTAGTGACTGCGATGGTGGCTACAGGGGTTCTAGAACATTCTGCCTCTATATGCCTCCTACTGGCTTCATCTGTAGTTTTGGTTTCAGGGAGCAACAGAGCCATCACAGACACCCACATTCTTCTCTGCTTCCCAGTTGATCAAATTCACCCTTTTGTTGTTTCGTGAATACCTGTTGCAATGAGAATACTGATAGTTGATGGGACTGACGTTGAAGAGCATGACTCTCCTGAGTCCATAAGAGACTCTGTCCCCCAGACCAGCCACCCTTGACACTGTCAGTGCTGTGACCAGGCTCAGTCTAGAGATGAGTCAGGTCCCAGGGAAATGACCATGTTCCCTTCCCTCTACGTCAGCCCCTGGACTAGCAGATGAGCCCTGAATCTCTACCCCCGCCCCCCCCCACAACCTACCTGCTCCCTAACATTTATGACATAAGCAGGACCATGCTGGTCACTTAACAGCAGTAGCCAGTCATGAGTCAGGGTGGAAATGCTCCTTCCTTTACTGGGAAGTATGGGTTTGATCATTAAGTCGCTGTGTCCTGACTTGCCAGGGACAACCCAACTTGTCCATTCAGCCCTCTCTCCTGGCCAGATCTTCATCTTGGGTATGAAGGGATCTGACTGTCCTTTTCCTCGCTGCCTGTGGGCTGGGGCAGCTTGAGAGGCATCATGCTGGAATACCGGCACCTCTTCATGCATAGGTAGGTGTGCCTGGGTCTTGGGGCCAAAGACCGTGGAGTGGTGACCATGTGGAGGTGGAAAAAGGGAGGTTTTTCCACCTTTTATGGGAACAAGGCAGCCTGCTTCCGGTTAACAATCTCATTTTCCTCCAAAAACAAGATAATTCCCAGATGAGCTTCAGAGGACAGTTTCAGCACTTAATCGTTTCTCTTTTAACCTTTCTTCTTATGAATGTGAACCGTGCTGTGGATAAATCATTTGTATTTCTTGAATGTTCTCTATGACTAACAGTTATTAAGTCAGTTGTGTATATGTGTAACTAATGGAACTGCCTTTTAAAATTTCATTACAATAAAAATGACTTTGCTCTGAACACTGAA EMBV3_01747 GAGAAGCGACGTCTGAGGCTTCCGAGCAAGGTAACCGATGGCAAGCTGGGATTATCAAAA Gene BVV0102_290676 + 0 NULL GK000020.2:67851471-67944635 20 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00118228 1 XLOC_072394 NonCoding TCONS_00118228 XLOC_072394 NonCoding NonCoding - 20:67851923-67852701 - TSS88696 778 1 0 0.000961843410374145 3.87471773106325e-05 0.000130840565139032 9.60634859537943e-05 1.90378980171564e-05 4.59775833513071e-05 0.00026984748506998 0 3.04246410394753e-05 2.64427711772957e-05 2.94239793522009e-06 0 0 0 6.93676628940415e-05 0 0 9.67517101088162e-05 0 0.00132181936042182 0 0 0 0 0.00039184075067546 0.00141271526831011 0.000173213870046344 0 0 0 0 noncoding 0 0 0 0 0.129591891925135 0.409478927157074 0.0119695399445611 0.831427779519391 GCTTTGTAGACGGCTTTCGATAGACACCAAAAACCTTCGCCGAGGGGGGGGAGGTGACCTGAGGTGACGTCACTGCAGGCGCCTCCTGGCCCTGAAGGACCCCGCACGCTGACGGGCTGGTGCGCGAGTTTTAACTGGAGCGGCGCGCTCCGTCAGACTGCGGCCGGGCCCAGGCGGAGACCCGAGGACTACATCTCCCGGCGGTCCCCGCGCGCCGGGCGGACCCCGAGCAGTTCTTCCGGCCGCCGCGGGCGCGCCTGAGGGGGCGGTTCGCCTCCTGAGGCGTTGTCGTCGTCGCCGCTGACCAGCCCTTCTTCTCAGACGTCTTTCTTCTCCGCAGCTCCTTCTCCTTCCGTGTCCACTTGCCTTCCGGCCCCGCGCTCCTCGGCCTCTTTCCCCTCCACCCCCCGGAAGTCCTACCAAGCACAGCGCCTGGCCGAATCCTGAGCGACCCCGCCTCCCGTCAGTGGCCGGCTGCTACCAAATCTTTTTAAAATCTCTTCAAAGGGGAAAAAAGAGAAAATCTTCACTTTACAGCAATTCCCGGATACCCTGAAGTCCTCATCCTCTTGTTTGAATCGAAGTTTTCCCCAATATCCGCTGCCACCAGAATCTTTTTGATAATCCCAGCTTGCCATCGGTTACCTTGCTCGGAAGCCTCAGACGTCGCTTCTCGACGTCTGGTTAGGAACTCCGAATTCTTAGCGTCCCATACAAGAACTGCATGCATTAAGGAGGCGTCCCAGACCCTATCAGCTCCTTCCTAAATCTTCAGGAT TCONS_00115280 . 5' 224 TCONS_00115280 . 5' 224 EMBV3_06004 GCCTCTGTCACTCATGAAGAAATGAAACTGAGTATCTTAACACAGCTGTTCCTGCTTTGG Gene GeneID:510810|WHAMM:XM_002696590:35_cdna Constitutive 0 NULL GeneID:510810 21 GENE WHAMM NULL WAS protein homolog associated with actin, golgi membranes and microtubules EMBV3_06074 CTGCCCTGTGAACATGATAACGCCCAGTAATGACAGCATGAGGGAGACCGATAATCCGAG Gene GeneID:509135|REL:XM_002691270:327_cdna Constitutive 0 NULL GeneID:509135 11 GENE REL NULL v-rel reticuloendotheliosis viral oncogene homolog (avian) EMBV3_22479 CGGGCCATGCTGCTAGGGTTTGCAATGATGGGTTTCTCGGTCCTAATGTTCTTCGTGCTT Gene GeneID:539609|LOC539609:XM_002707771:35_cdna Constitutive 0 NULL GeneID:539609 1 GENE LOC539609 NULL similar to calcium-activated potassium channel beta 3 subunit EMBV3_25011 TTGACGGACTTAAAACATTCACAAGCATATCCTGAGGTGGGGGAATGTGGGAATTCAGGC Gene GeneID:541299|STIM2:XM_002688161:49_cdna Constitutive 0 NULL GeneID:541299 6 GENE STIM2 NULL stromal interaction molecule 2 EMBV3_20365 TGGCATTTTTGATAGTTGTATGGCTTTTTACTGTTAGACTGATCAGAATAACTAAAAGGG Gene GeneID:538938|SEC62:XM_002684930:79_cdna Constitutive 2 NULL GeneID:538938 1 GENE SEC62 TLOC1 SEC62 homolog (S. cerevisiae) EMBV3_35297 TCCTGATTGAGGACCAAGGTGCCCAGGGCTATGAGCTGTTCTTCAAGACACGAGAACTAA Gene GeneID:617345|VAV1:NM_001078074:93_cdna Constitutive 0 NULL GeneID:617345 7 GENE VAV1 NULL vav 1 guanine nucleotide exchange factor EMBV3_04762 GGATACAACACTGGAAGAAAATATCCACCCCCTTACAAGCATTTCTGGACGGCAGAGAGC Gene GeneID:100125221|UBAP2L:NM_001103107:2_cdna Constitutive 0 NULL GeneID:100125221 3 GENE UBAP2L MGC152087 ubiquitin associated protein 2-like EMBV3_28695 ATGTACCCTCCTCTAGCCAGCAACCTAGCCCATGTAGGAGCCTCAGTAGACCTAACCATT Gene GeneID:100299681|LOC100299681:XM_002689988:2_cdna Constitutive 0 NULL GeneID:100299681 9 GENE LOC100299681 NULL similar to cytochrome c oxidase subunit I EMBV3_16889 CCCTCCTTCTTGTCCGAGTTCCGGGCCCTGCAGTTCTCTCTCATGCTCTGCGCCTTTGTG Gene GeneID:505997|SPNS1:NM_001076808:254_cdna Constitutive 1 NULL GeneID:505997 25 GENE SPNS1 MGC140615 spinster spinster homolog 1 (Drosophila) EMBV3_08900 TGGACGTCAGGACAATCTTGAAATGGAAGATGAGCATGTTAAGGAAGGGCCGTCGGACTC Gene GeneID:534671|LOC534671:XR_083729:22_cdna Constitutive 0 NULL GeneID:534671 8 PSEUDO LOC534671 NULL similar to Serine/threonine-protein kinase Nek1 (NimA-related protein kinase 1) (Renal carcinoma antigen NY-REN-55) EMBV3_17613 TCAGAGTAGGTTGTAAACGCTTCTAAGTAAGCAAATACAGAGGCAAGATAAATAGAAATG Gene GeneID:503621|PDLIM5:NM_001077444:5_cdna Constitutive 1 NULL GeneID:503621 6 GENE PDLIM5 NULL PDZ and LIM domain 5 EMBV3_23711 CTCTGTCTTGTTTCACTTAGCACAATGTCCTCCAGTTTCATCCTTGTTGTAGATAGCAGG Gene BVV0102_218618 + 1 EMBV3_19446 GK000009.2:51561212-51596387 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00157 TTCATCCCGAGCTGTGACGAGGATGGTTACTACCGGAAGATGCAGTGTGACCAGAGCAGT Gene GeneID:523846|SPOCK2:NM_001101115:335_cdna UTR3_Alt 2 NULL GeneID:523846 28 GENE SPOCK2 NULL sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 EMBV3_20359 CAGAAGAGTACTGTGTGTTGGGACCCCAAGGTATTCACAGTTTTATATGGAAGATAGTTT Variant GeneID:511397|ZCCHC4:XM_002688158:40_cdna 627^707 2 EMBV3_27003 GeneID:511397 6 GENE ZCCHC4 NULL zinc finger, CCHC domain containing 4 EMBV3_21977 TATGAACTCATTTTGCTGGGGAATGTTGTGCCTGATTGTGCCAGGGACTCCCCTAACGTG Gene GeneID:523736|PIP5KL1:NM_001075847:118_cdna Constitutive 0 NULL GeneID:523736 11 GENE PIP5KL1 NULL phosphatidylinositol-4-phosphate 5-kinase-like 1 EMBV3_38037 TGGCCTGTAGTTTTCTTTTTTGTGGGATCTTTGTCGGGTTTTGGTATTAGGGTGATGGTG Gene BVT0102_277991 + 0 NULL GK000023.2:21091263-21833233 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00254568 TCONS_00007449 TCONS_00064860 TCONS_00251888 TCONS_00088964 TCONS_00250538 6 XLOC_157500 XLOC_003010 XLOC_039584 XLOC_154829 XLOC_053750 XLOC_153481 Coding TCONS_00254568 XLOC_157500 Coding Coding - X:137888892-137890609 - TSS191789 1717 3 TCONS_00254568_4 158 0.999417588817705 1 0 9.11271870172183e-05 0.000146308045608442 6.95753256569011e-06 0.000111055515266673 1.06392349808421e-05 5.92009005732846e-05 3.72209131099682e-05 1.38748389827849e-06 3.83923718094061e-05 3.67436443396063e-06 2.41254117215037e-06 9.35398991799709e-05 1.82301885034761e-06 4.20081377268332e-06 3.86149391810957e-05 0.000158171031129155 1.72862331347782e-05 8.141724817499e-05 3.45715862088695e-05 8.62854832914921e-05 0.000230734560295135 4.91100928600487e-05 6.83257340441239e-05 0.0002481975126736 0.000125399235889299 4.85221740170004e-05 9.75996947889923e-05 1.94242149454548e-05 1.8544116558353e-05 5.25365088291887e-05 NM_001206364.1 SLAMF6 Bos taurus SLAM family member 6 (SLAMF6), mRNA. 3e-61 241 82.50 0.135701805474665 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 0.0 818 71.75 0.942341292952825 TCONS_00254568_4 sp|P11369|POL2_MOUSE POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1; 1e-76 250 76.92 0.981012658227848 1 noncoding 1 1 1 1 -0.641184986824861 0.18192359529867 0.00764513288291539 0.878520266287245 CTAAACAGAAAATTAACAAGAAAACACAAACTTTAAATGATACAATAGACCAGTTAGACCTAATTGATATCTGTAGGACATTTCATCCCACAACAATGAATTTCACCTTTTTCTCAAGCGCACATGGAACCTTCTCCAGGATAGATCACATCCTGGGCCATAAATCTAGCCTTGGTAAATTCAAAAAAATAGAAATCATTCCAAGCATCTTTTCTGACCACAATGCAGTAAGATTAGATCTCAATTACAGGAGAAAAACTATTAAAAATTCCAGCATATGGAGGCTGAACAACACGCTGCTGAATAACCAACAAATCACAGAAGAAATCAAAAAAGAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAACAACCCAAAACCTGTGGGACACTGTAAAAGCAGTCCTAAGGGGAAAGTTCATAGTAATACAGGCATACCTCAAAAAAACAAGAAAAAAGTCAAATAAATAACCTAACCCTACACCTAAAGCAACTAGAAAAGGAAGAAATGAAGAACCCCAGGGTTAGTAGAAGGAAAGAAATCTTGAAAATTAGAGCAGAAATAAATGCAAAGGAAACAAAAGAGACCATAGCAAAAATCAACAAAGCCAAAAGCTGGTTCTTTGAAAGGATAAATAAAATTGACAAACCATTAGCCAGACTCATCAAGAAACAAAGGGAGAAAAATCAAATCAATAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAAGGATCATAAGAGACTACTATCAACAATTGATTATATGCCAATAAGATGGACAACATGGAAGAAACGGACAAATTCTTAGAGAAGTACAACTTTCCAAAACTGGACCAGGAAGAAATAGAAAATCTTAACAGACCCATCACAAGCACAGACATTGAAACTGTAATCAAAAATCTTCCAGCAAACAAAATCCCAGGTCCAGACAGCTTCACAGCTGAATTCTACCAAAAATTTAGAGAAGAGCTAACACCTATCCTGCTCAAACTCTTCCAGAAAATTGCAGAGGAAGGTAAACTTCCAAACTCATTCTATGAGGCCACCATCACCCTAATACCAAAACCTGACAAAGATCCCACAAAAAATAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAAAATCTTTAACAAAATTCTAGCAATCAGAATCCAATAATGCATTAAAAAGATCATACACCATGACCAAGTGGGCTTTATCCCAGGGATGCAAGGATTCTTCAGTATCTGCAAATCAATCAATGTAATACACCACATTAACAAATTGAAAAATAAAAACCATATGATTATCTCAATAGATGCAGAGAAACCCTTTGACAAAATTCAACATCCATTTATGATAAAAACTCTCCAGAAAGCAGGAATAGAAGGAACATACCTCAACATAATAAAAGCTATCTATGACAAACCCACAGCAAACATTATCTTCAATGGCGAAAAATTGAAAGCATTTCCTCTAAAGTCAGGAACAAGACAAGGGTGCCCACTTTCACCATTACTATTCAACATAGTTTTGGAAGTTTTGGCCACAGCAATCAGAGGAGAAAAAGAAATAAAAGGAATCCAAATGGGAAAAGAAGAAGTAAAACTCTCACTATTTGCAGACGACATGATCCTCTACATAGAAAACCCTAAAGATTCCACCAGAAAATTACTAGAAATAATCAATGACTATAGTAAAG TCONS_00248504 . 5' 173624 TCONS_00248504 . 5' 173624 EMBV3_36651 TCTTTAAAATTGTTAATGTATAACAGGGCTTATGTTTCAGTTTTCTGTTTTCTCCTAAAC Gene GeneID:538442|MORF4L2:NM_001099084:48_cdna Constitutive 0 NULL GeneID:538442 X GENE MORF4L2 MGC166351 mortality factor 4 like 2 EMBV3_18242 GCTTTGTCTCTGAATGCCCTGCGACAACACCACCGCCAGTAGGACTTCCATAGAGACTAT Gene BVV0102_209335 - 0 NULL GK000011.2:90507468-90926446 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00033712 1 XLOC_019945 NonCoding TCONS_00033712 XLOC_019945 NonCoding NonCoding - 11:90923954-90925558 - TSS24711 1604 2 TCONS_00033712_1 44 1 0 0.000390187673384842 0.000826929487011248 0.000715395678363796 0.0004555890261221 0.000381676584270769 0.000263150154457258 0.000783500028376848 0.00111730661471875 0.00170690587903286 0.000297556974428643 0.000101329332517632 0.000222922924673041 0.000252224983903543 0.000612926833056311 0.000601039789242205 0.00103736564943117 0.000798027040448065 0.000203355393381165 0.000925425585385785 0.00158265404396143 0.000569672795151565 0.000407119738157718 0.000674898722913582 0.000219487025206413 0.00195241425802702 0.00180529168942448 0.000836499569566964 0.00013772969815555 9.38234002199921e-05 0.000209904315511988 NM_003108.3 SOX11 Homo sapiens SRY (sex determining region Y)-box 11 (SOX11), mRNA. 0.0 2042 87.73 0.998129675810474 0 noncoding 0 0 0 0 -0.120157068081603 0.658551779561414 0.0758965354741938 0.196119459904692 AGGAGGAGGTGAGAAAGGAAATGGGGTTGCAAAGGGGGAAGGGAAGGGAAGGCCGACAGAAAAGAATCCTCCGCCCCGGGTTTGCCTAACCAGCCACCGAAAAAGAGAAGCGAGGAATTGGCCAGCCATTGAGCACTTCCAGCCGAAGCCCGGAGAATATGGGATTCCCTCCGGCCACCTTCCCACCCGCGCGCACAGGGGCCTTGTCTCTGAATGCCCTGCGACAACACCACCGCCAGTAGGACTTCCATAGAGACTATGGGCGATGCGAGTTTCTATCAGTTCCAGCTGATTTATTAAAATTGTCAAGATACAGACTTCCAGCACCAAAAAAAAAAAAAAAACAGGCAATGATGTCGACAGTGCATTGAGTCTGCTTTGCCACCATTTGCTACAAAATATGCAGATGGTCTGTACTTTATTTAGATTATATTGCACAAAATGAGAAACTTTTTAAACTATGTGCCTTTTTCTTTTTGCTAAAAATCGAGAATCCAGTTTCAAACCTTCCATCTGGGGCCCCATCCACATATCACAGCGTATGAGATACATAAAGTCCTACTATAGTACAGTACATATACAATCTTTAAACTAAGATAACAGCTCTGAGGTCTATATCACCGTTTTCAATAAATCTTTACCTACAAATATTGAACAAATCTCTACTATAGCTGTACAAAAAAAGTTTGCTTTTTTTTTTTTTAACCACAAGGCCTTTAGATGCAAGGATTATTTTAAAATTTTAATCCTTTTTAAACCAGGACATAACGTACCAACATACTTGCATGCTAAAAAAAAAAATAAGAGGAAAAAAAGAAATCAAAAGGGAAGAAGTGCCTGAAAGTCTTACTGAAAAAACACAGCAAGAATGTTCCCTTTTCACTGTACAAAAATACGCCTGAAAATATATTAATTTTTAAAAAAGACTGAGGTCTGTTATGTATCAAAAATGTTTCAATACCTTTTGTACTGAGGTCTAGGCTGCCTGGTATTCAATCAAGGAGGTATAAGGGAACAAGTTACAAAAAAAAAGTTGGCAAGTAGAAATCACATTTGTAAAACCATAAACAATTTGATCTGAAAAGTAAACTCTGATCTTAAGTCAGTTCACAGTTTTTTTTTTTTTGTAAGCGTTTGTACAGTCTGCATTTTTTCAAGCTCCCTGCAGTTTTGTTAAGAATCGGATGCATAGAAGACATCAGTTTTCTCCCTCCAAAAAAATAAAATTAAATTAAAAAATTTGCCATGGTCCCTTTTTTGTTTTTGTGTTTGTATTTTTTTTAAAAAAAATCACCAGTTCTTTAAGATCTCTTAAGAAAAAAATAAAATAAAATAAAATAAAATCTCCAACCAACTCCCCAGTTGTGCTGCCAAAGGGTCCTCTGCAGGCGTCTTCCAGACTTCAAAGACCAACAAGCTTCAAACAGCGCCTTCCGGAGCGGGTCCTCGTTCCCCTCCCCCGCCCCGTCCCCTCCGCCTTTGTTGCCATCGCGAATTTCAGGAAAAAAAAGAAACAGTAATTACAAAAACACATTTGAGGGGGGTGGGGGTGGAAATCACAACTCCAGACTAGGTATTCAACTACCTTGAGACACGATCAAGNN TCONS_00025885 . 5' 889 TCONS_00025885 . 5' 889 EMBV3_19715 CGTCCTGTGAGCTGACCCTCTCTGTGACTGGGAGGACGCCATGGCACCGGGGGTTTCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19008 TTGGAAACGCCCCTTGGCCCATTGGTGTTACTATGGTTGGCATCCATGCCAGAACTGGCA Gene GeneID:507639|PRPF18:NM_001075323:79_cdna UTR3_Alt 2 NULL GeneID:507639 13 GENE PRPF18 NULL PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) EMBV3_21712 TCTTGCCCCCTTAGGAGCCTTTTGGGCCTGTCCTGCTACTTACCTTGGGCTACAAAAGTA Gene BVT0102_108471 + 0 NULL GK000014.2:1945911-1947197 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00052595 1 XLOC_031512 Coding TCONS_00052595 XLOC_031512 Coding Coding EXOSC4 14:1946166-1949827 = TSS38984 2623 2 TCONS_00052595_6 245 3 0.284153005464481 0.00258941287146983 0.00187736220797279 0.00309759571962385 0.00138310022661069 0.0013307612109134 0.000616009312450416 0.000531478260473159 0.000860047614071083 0.000848266960569954 3.69522834293074e-05 2.86441764696455e-06 0.000165758803922449 1.65131166404233e-05 0.000204435295742617 1.83756660843965e-05 0.000357366493107041 4.15034957562061e-10 0.000363537857441374 0.00328820149454262 0.00374513211106782 0.00088078938636768 4.84757025725314e-05 2.38552428412576e-10 9.53631623021216e-05 0.00283373418897591 0.00179063220764682 0.0028904808452589 2.28775055338622e-05 0.00017428185127921 3.32381159113558e-05 NM_001078086.2 EXOSC4 Bos taurus exosome component 4 (EXOSC4), mRNA. 0.0 1508 99.88 0.319481509721693 NM_019037.2 EXOSC4 Homo sapiens exosome component 4 (EXOSC4), mRNA. 0.0 1029 89.14 0.298131910026687 TCONS_00052595_6 sp|Q7YRA3|EXOS4_BOVIN EXOS4_BOVIN Exosome complex component RRP41; 2e-177 493 100.00 0.995918367346939 2 coding 0 0 0 0 -1.75858475534345 0.0191698598080988 -0.0244649816022025 0.740104670156092 TGTGTGACTTGGATGTAATTATGAGTGTGGAGAAAAACATGGAACCATTTTTTAAGCTATAGTAGATAGGGGGATGCTTGCAGAGAAAGAAGGCAACATGGAAAACTGAAACTAAAAAATCTGACCATGTGTACGTACAACATAAATATGTCTGCTTTTTAAACGGACAAATGTAAAACCTAAACGGTTAAAAAATTAAAAACAAACAAACAAACAAGCGAACAGAGCGTATATCTCAGCTTGGGAGAACGCCTGCATTTATGATTGCGGAAGAACTTAAGACCAGCAGTGGCGGCTATCCTCGCAAACCTCGAGGGAGATGCCAAGCGTCAAGCAGAAGTAAAGGCGAGCCAGCGGCGCGGGGAGCGCGAGGCTCAGTGGAGAGGCAGAGGGAGAGGCGGCGGCGCGGCGGAAGCCCCGCACCCCGGGTCCCGGCAAGGGCCCGGGCCGGCGGCGACCAAGGCGGCGTGGGGCGGGCAGGCCCGGATGGTAGAAGGATCCGCCCCCACGACAACCCGGGAAGAAACGACACGGCGACTCCACGTCCAGCATGCCTCCAGCCCTGCAGGCGCGAGCCCGTACCGCAAAAGGCCTCAGGGGTCCCTCCACGCGCCCCAGAGCCACAGTTCCGCAAGGACCGGAAATGAGATATGGTGCCCTCGGGCACTCTGGGAGAATCGCAGGGCTCCAGAACCGGAAGTTGGAGTCGGTGCCCCGGAAACCGTAGTCCCCGGGAATCGGAAGTGGGGAGTCAGTTCTACCGGGAATTGTAGTTCTGCCGAGCGCTCAAGCGGGGTTAGCGCCCGGGCAGCATGGCTGGGCTGGAGCTCCTATCGGACCAGGGCTACCGAGTGGACGGGCGGCGCGCTGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGTGTATTCGCGCAGGCCGACGGTTCGGCCTACATCGAACAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCTCACGAGATCCGAGGCTCCCGGGCACGAGCCCTGCCTGACCGGGCCCTGGTAAACTGTCAGTACAGTTCTGCAACCTTCAGCACAGGGGAACGCAAACGGCGGCCACACGGGGACCGCAAGTCCTGCGAGATGGGTCTGCAGCTGCGTCAGACCTTCGAGGCAGCCATCCTTACACAGCTGCACCCACGCTCCCAGATTGACATCTATGTGCAGGTGCTGCAGGCAGACGGCGGGACCTATGCAGCTTGTGTGAATGCAGCCACGCTGGCAGTGTTGGACGCAGGGATACCCATGCGGGACTTTGTGTGTGCCTGCTCAGCTGGCTTTGTGGATGGAACAGCCTTGGCAGACCTCAGCCACGTGGAGGAAGCAGCTGGGGGCCCCCAGCTGGCCCTGGCCTTGCTACCAGCCTCAGGCCAGATTGCACTGCTTGAGATGGATGCCAGGCTGCATGAGGACCACCTGGAGCAGGTGCTAGAGGCGGCTGCCCGGGCTTCCCGGGATGTACACACCGTACTGGACCGTGTGGTCCGGCAGCATGTACAAGAGGCCTCTGTCTTGCTGGGGGACTGAGCACATGGCCACCCAGGCCCAGAATAAAACCCAAGCACCTTCCACTGTACTTTTATCTCTTCCCCACCGCACTTCCTTGCCCTTGGATCCTGGCCTGGTGCTGGCTCCAGCAGTGACTAAGGGTCCGCCCCCCAGACATGCACTACACACCCCTTGCAGTCAGTCCTGCTCACCCTGCTCATCAGGGTGCTTCAGGTGAGCACCCTGGAGAAGGGGGATGTCCCTGAATGAAGTGAGCAGCCTGGGCCAAGAAGGGTTCGAGGCAGCTGGGCAGTGAGACACAGCCTGGTATAATGAGCCATGCCCCAGGACCATGGAGTCTGTCATTCTTATCCCAACACATCCAGAGTCCTGAGCACAAGTCCTGAGGGGTGGCTTTGGGTATTCACCATGGTCATGTGGGGGCCGTGTCCCACATCCTCTGGATTGTGGCTTGGACTGAAGGGTCTCTTGCCCCCTTAGGAGCCTTTTGGGCCTGTCCTGCTACTTACCTTGGGCTACAAAAGTACAACAGACACATAATGTCACCTGGAGTCTTCTCAGTTCTGACCCTAAGTCATACAGACACTCCCTGCTGCCCCACCACTGCACCTTCGTCTTTCAGGCTCCCCCTTCTTCCACCTCAGACCTGAGCCCTGACCACCAGCCCCTGCAGCCTGAACCAAGGGGCTGCTGCTTCTCTAATATCCCAGGCACCTCCTGGCCCAGACAGGGATGCTTCCCACTTTCTACTCAACACACCCTAGCTCCTTTGAAATCCTTTGGCCAGTAGTATCATGCACCTTCTTCCCTGTGGTCATCTGACCCCAATGATTTTGGTTCTGGGCACATGCTTGATTCCACTCGGCTGGTTTTGGTTACCGACATCCATTGGAATGGACCCGCCAACGCCTTGGCTTCTCTGTCCGCGGAAGCCCCCTCACATCCTACCACGGCACTCAGACCGGTCAGTGCCAGTGGGAGCACCTTCAGAAATCTGGCGTCTATGCTCTGATCGCCGCTTCCCCTTTTACTCTCAGCTGCCCTATTCATCACTCTTCTCTGATTCCAGTTGAAGCCGAGCTTTCTCGGGC EMBV3_38127 TGACATCCAGATGGTCCACCACCGCACCATTCGTGGGAACACAGAGGAGCTGCGACAGAT Gene GeneID:541308|SGCA:NM_001013402:162_cdna Constitutive 0 NULL GeneID:541308 19 GENE SGCA NULL sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) EMBV3_41634 TCTTAGAAGGATATGCTGCCTCCTTTCCTGAGGGGCCTCTTCTCATCCTGGTCCACAGAT Gene GeneID:521831|CRHR2:XM_002686837:37_cdna Constitutive 0 NULL GeneID:521831 4 GENE CRHR2 NULL corticotropin releasing hormone receptor 2 EMBV3_04335 GCCCGCCACCGACACTGAACAAGTGCAATTAACAAATGAAACCTGGGCCTCAGTCCTTCA Gene GeneID:505007|MOBKL2A:NM_001034229:31_cdna Constitutive 0 NULL GeneID:505007 7 GENE MOBKL2A MGC139515 MOB1, Mps One Binder kinase activator-like 2A (yeast) EMBV3_00532 ACATGTACGCCCCCAAGTACCTGCTGAAGAACTACGACCAGTTCCGCTACCTGCTGGACA Gene GeneID:520087|MGAT3:XM_002687927:148_cdna Constitutive 0 NULL GeneID:520087 5 GENE MGAT3 NULL mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase EMBV3_24408 TAGGACTTTATCTCCTGCCAAGTCTCCTTCTTCGTCAACTGGGTCTATTGCTTCCAGCAG Gene GeneID:523645|ADAM22:XM_002686858:56_cdna Constitutive 0 NULL GeneID:523645 4 GENE ADAM22 NULL ADAM metallopeptidase domain 22 EMBV3_16484 GCTCTCGGGGCTGTGCAGGGCGCATCTCAGCCTCAAATCTTGGCGCAAAAACCAGAGACA Variant GeneID:528380|MIPOL1:XM_002696726:159_cdna 80^217 1 EMBV3_36384 GeneID:528380 21 GENE MIPOL1 NULL mirror-image polydactyly 1 EMBV3_05091 CTCAGATGAGCACTGATTATGGTGTCTACGTCAACTGCAGCTTTGAACATCCTGCCAAGA Gene GeneID:539550|NPC1L1:XM_002686890:99_cdna Constitutive 0 NULL GeneID:539550 4 GENE NPC1L1 NULL NPC1 (Niemann-Pick disease, type C1, gene)-like 1 EMBV3_21493 GAGTTTGGAAATGATTTGAGCAATGCCAAGGCAGAGAGAAGGAGTTGATATGGAACAGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40233 CAAAAGTTCTGCCTGGACAATGTGAAGTGTGGCAGACATGGCAGGCCTTGGGTCCTGAAA Gene BVV0102_106899 + 0 NULL GK000021.2:27108984-27232611 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13863 AGACCAAGCAAAAAGGACTTCCCTCTCACGCTGAAGTCTGCCAACCACTCCCAGACATCT Gene GeneID:100299076|LOC100299076:XM_002687010:37_cdna Constitutive 0 NULL GeneID:100299076 4 GENE LOC100299076 NULL hypothetical protein LOC100299076 EMBV3_14506 GGCTCTTTTCAGAGCCACCCACTAATTTCAGGTGAAAGAGCTTAACCGGACATAAATCCC Gene GeneID:509275|HIST1H1D:NM_001101066:65_cdna Constitutive 1 NULL GeneID:509275 23 GENE HIST1H1D NULL histone cluster 1, H1d EMBV3_06333 TTACCACCAGTGTGGGCAAAGGATGGAGAAGGACTAGTTCCATGATGCACACCCCAGCGT Gene GeneID:515361|LPCAT3:NM_001024546:46_cdna Constitutive 0 NULL GeneID:515361 5 GENE LPCAT3 C3F MBOAT5 lysophosphatidylcholine acyltransferase 3 EMBV3_13172 ACGACACTTTGTCCTGTTCATTCCACAGCCGGTATCACTAATTTCCAACTCGTGTCGGCC Gene BVV0101_004738 + 0 NULL GK000009.2:86369025-86719707 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00684 GGAGGCGACGCCACAGCAAGACATCAGCAGGAGGAGAGGGGGCTGAACCCCTGCGAGATG Variant GeneID:534297|METRNL:XM_002696106:183_cdna 582^990 5 EMBV3_04459 GeneID:534297 19 GENE METRNL NULL meteorin, glial cell differentiation regulator-like EMBV3_13952 CAAAGATTGGATTAAAGAGAAGATCTACGTGCTCCTTCGTCGACAGGCCCAACAGGCTGG Gene GeneID:508901|ERH:NM_001034336:73_cdna Constitutive 1 NULL GeneID:508901 10 GENE ERH MGC128307 enhancer of rudimentary homolog (Drosophila) EMBV3_27120 CTGGAAATCCTCCCTTTTCATCCTTGGTTGGTGGGGAGGGCCAAAGTGAACACACCAGAT Gene BVT0102_216681 + 0 NULL GK000011.2:47484356-47669359 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00024952 TCONS_00024953 1 XLOC_014620 NonCoding TCONS_00024952 XLOC_014620 NonCoding NonCoding - 11:47621070-47624013 - TSS18209 2738 2 TCONS_00024952_3 125 0.224616508400292 2 0.0700203942895989 0.000496921008158094 1.10099242737347e-05 0.000801022080040929 0.00098570090858611 6.31122616683086e-05 0.000151547612195139 0.000296058709606139 1.51215003610965e-05 0.000113147638363827 2.55463899726609e-05 0 0 4.19074943642007e-05 0.000376251239949214 1.07513368927111e-05 0 0 3.62367127590843e-10 0.000764759855578732 0.000514799350585235 0.0012035361009209 0 0 0 0.000407408583448333 0.000161682476445888 0.00016327521891025 0 0 0 0 noncoding 0 0 0 0 -0.272681523889489 0.11185888059689 -0.129588470030456 0.289060537768493 GCAGCAAAATAGGGACCACCAAAAACAAGCAAGCATCTAAAGGAAAATTATAGGCTCCTAGGAAACCTCAATATATCCTCATAAAGTTTCATTTGAGTTATGGTGAAATGACAATGGGACCAATCCTTTCTCCAATTCCTTTTCTTGACAGGGGAACAGCTCTTGTGATACAAGAAACTGTCACCTATATCTCAACAAGTGGAGCTCACAGACCAACTGGTGAGTTTCAGTTTACTTTCAGATGTAAGGAGTCTGAGGGGAAATTTAAGTCTCAGGTAGCAATTTGTTCAAGATATTTTAATGATTAATAAGCATGCCAGGACAAACTTTTGGAAATGAGAATGGGCCTGAGATTTGGGGGACATTTAGCTATTAAATAGGCTCTAAATAGGCTCTTACTCTGAGGAAGAGGAGGAGGAGATGAAATAGAGGAAAAAGAGAAATAGGAAGAAGGCAATAGGAAATTTTATTGTCTTACTCAAGGTAAATGAAGCTCATCCAGCCTCCCCCTCCCTGGAAACACTGGCTTCTTCCTGGCCTCTTGATCTTACCTGCCCACCAAGACTAAGTCACTTTTTTAGAGAAGAAGACAGTTAAGGGATTCAAGTGCAGACTCCAAAGTCAGCCAGCTTGAGTCTGAGTCTCCTCGCACTACTTACCTGCAGGGCTATGGGCAAATACTTAACCATTTCTAAGCCTTAGTTTCCTCATCTGTATAATAGGTTCCTATATTATAGGCCCTAGATTTAAATGAGAGAAAGCAAGTCATGCCCCTAGCAGAGTATCTAGTGCTCAACAGACACCAGCCATTGTTATACTGAATCTCCCTGGATTAAATTCTATGGCAAGAGACCCCGCCTCTCCCCCTAGACCTCAGTCTGCCACCCACTCCTCTGCCCACAGCACCCCTCCCCCTTTTTTAAAAAAATAGGATTGACCATTCTGATCCCCTACAAGGAAATGTGCGGAGCCGCAGACAGAACGGAAGAGCAGCTTATGGAACCTAAAGAAACTCATGGCAATCAGCGGCCCTGGTGCTTTCCACCTGGAAATCCTCCCTTTTCATCCTTGGTTGGTGGGGAGGGCCAAAGTGAACACACCAGATCTAGTGGAGGCCTCCCTTGAGGGTAAAAGGAGAATGGAGAAGGTTCCAAGCCCAGCTCCACCACTGACGAGCTCGGTACACGGTGGAGCTCAAGATGCATTTCCTTCTTCGTCTCTGAGCGATGCCCCAGAAACCACAAGAGAAGACGCTAAGTCCCCAGTAACAACTTTCATCTTTCTGCCTGCTTCTCCGCTCTGGCCTCTGGAGAAAAGTTCTCGCCTGCCTGCTTCGCTCCTCAAGAGTTTATCAGGCGCTTCCCCGGGACCCAGATGGCCCAGCCACTCCTGAACCACCTGGGGAGGGAGTCTCACCAAAGCCTGCTTGGGGCCCCTTCCAGGGTAAGAGAACACGCCTTTTGAGGATGACGATCGCCTTCCTCTTCCTGCAGAGCCGCGGTCCTTACACACTCCGAGCTGGGAGGAGGCTGCCGGGCGTCCGGGGAGGGGGCGGTAGCAGGGGTCGGCCTTCCGCACGTTGTAGCTTGGCACCCACTCCCAATGGCTCAAAATTCTCCAAACAGCAGAAAGGGCTTGAAAAGAGATAATGACAACTGAATGACAGCCGTGATTTCAGGAGGCAGATATTCGCGGAGATGCCGGCACCGATTCTTCTCTGTGGTGGCCTAGGTGTAGAGGCTTCCGGGAGGTGGCGCGGCTCCGGGGAGCGGGAGGGTAGAGGTTCTCAGCCCCCAGACCAGGGCCTCGGGGCTGGACAGACGATTGGACATTCGCCCCTGGCAAGGTCGGAGGCCCTCGAGGTCTCAGCAGGCGGGGTGCGGCTGGTCCCCCTGGCAGACCCTTGGGCTCTTCGCGGGAGCTTCGCTTCTCATGAAAGTGGGCTTGAGAGTGGAGGGGATGAGCATTGGAAGAGGTAACTTGGGGGTGCTGAGGCAGATTGTGGGGGAGGAGGCTAGAGACACTTCTGGAGAGGACCTCCTGGAAAATAGGCCATTGTGAAAAGCATCACCTGGGAACTTGTTAAATAGGTAAATCATCTGAATCAGGTTGACCCTGGCAATCAATTGACTCAGCAATGGGCAGGCCCTCCTCCAAGTGATTCTGATGCCGGCTCAAGTTCAAGAATCCCTGGTACAAAGGAAGGGCACTGACCTCTGGGGCTGGGACCCTCAGTTCTCCCATCAGTAAAGGAAGGGTGGGGCCAGATCAGGGAACCCTGGTGGATGGAATCAGGCAGGTTACACAGGGTGAGAGGGGGCAGGTAGGTAATGTCACACCCCAAAGGGCCTGTGCTCTGTGCCAGCCAGATGTCACCTGGCCTGAACTGGGGACAGATTGTTGCTATATTATCTGGTTTTGCAAGAGAAGCTGGAAACCTAGGTTTTTAAAATGTGAAGTCTTCTGTGTTTTAAGTGTTGGGAACTAGTTAGACATTTCAAAAACATTGTGTGGGTCTTCACTATAGGGCAAGCACAACACATCTACCACCTGGATTTGCCCTGTGGTTCCTAGTTTATTCTTTAAACTCCAAGATCTCATCTTACCTTGAAATAGCCTGTGAGATTGACAGAAATGTGGCCAAAGCCCTGGGACAGAAAAGTACGGCTTTCTGAAGTTCTAAGAAATTATTATTAGGAGAGACAATTTTTTGAACACCTGGTAGTCACACAAAAATA TCONS_00027825 r 3' 111874 TCONS_00027825 r 3' 114816 EMBV3_36328 CAAAAATAAGACCTGGACCAATGGGCATACACATGTCTGTACACACTGTCCCTCTGCCCC Gene BVT0102_133485 + 0 NULL GK000007.2:21610681-21613836 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216021 TCONS_00216020 1 XLOC_131151 Coding TCONS_00216021 XLOC_131151 Coding Coding FZR1 7:21611950-21631261 j TSS161216 3727 1 TCONS_00216021_4 496 14 0.807716209218022 0.000331798334861793 0.000375055262993194 0.000190258941059149 0.000223671798193006 0.000267945968092152 3.81801657291934e-05 8.26772282498285e-05 0.000725514347927127 1.74667169853516e-09 6.95430690709902e-05 8.56500612836779e-11 2.96692074448134e-13 2.06344716609009e-08 9.55319976199236e-09 3.48227629549559e-05 1.34894050781109e-06 0.000260761448661784 0.000922577104380747 0.000608762652373301 0.000295175817762764 0.000644882784678199 0.000183090941475847 0.000359518150417008 0.000177072561373142 0.000412481273745397 0.000109618811678939 0.000117820721488163 0.000113352760428904 3.53875682957754e-05 2.42713672119161e-09 XM_005208949.1 FZR1 PREDICTED: Bos taurus fizzy/cell division cycle 20 related 1 (Drosophila) (FZR1), transcript variant X1, mRNA. 0.0 5515 100.00 0.82023074859136 XM_005259573.1 FZR1 PREDICTED: Homo sapiens fizzy/cell division cycle 20 related 1 (Drosophila) (FZR1), transcript variant X1, mRNA. 0.0 2199 85.68 0.511134961094714 TCONS_00216021_4 sp|Q9UM11|FZR_HUMAN FZR_HUMAN Fizzy-related protein homolog; 0.0 1014 98.99 0.997983870967742 2 coding 0 0 0 0 -0.16502939033835 0.328209465140385 0.0428656205657185 0.493625017698025 ATTAAAGAGCGCGGAGCCCGGGATCCCGTCAGCTGCGGCCGCGGCCGGACGCAGCGGAGCTGCGCGCAGCGCAGGTGGGCGCGTCGCGGCGCCGGGAGAGGCGGGGCCGGTGGAGCCAGAGGGCGAACGGGAGCGAGCCAGGCCATCCAGGGCCGCTGAGCACGGCTGGCGGGGCCGTGCCTGCCCGCCTCACCATGGACCAGGACTATGAGCGGCGCCTCCTGCGGCAGATCGTCATCCAGAACGAAAACACGATGCCGTGCGTGGCGGAGATGCGGCGAACCCTGACCCCTGCCAACTCCCCCGTGTCCTCCCCCAGCAAGCATGGAGACCGCTTCATCCCCTCACGAGCTGGTGCCAACTGGAGCGTGAATTTCCACAGGATCAACGAAAATGAGAAGTCCCCCAGCCAGAACCGGAAAGCCAAGGACGCCACCTCGGACAATGGCAAAGATGGCCTGGCCTACTCCGCACTGCTCAAGAACGAGCTGCTGGGCGCTGGCATTGAGAAGGTTCAGGACCCACAGACAGAGGACCGCCGGCTGCAGCCCTCCACACCTGAGAGGAAGGGCCTCTTCACGTACTCCCTCAGCACCAAGCGCTCCAGCCCCGATGATGGCAACGACGTGTCCCCATACTCCCTGTCCCCCGTCAGCAATAAGAGTCAGAAGTTATTGCGATCTCCACGGAAACCCACGCGCAAGATCTCCAAGATCCCGTTCAAGGTCCTGGACGCTCCCGAGCTGCAGGATGACTTCTACCTGAACCTGGTGGACTGGTCCTCCCTCAACGTGCTCAGTGTGGGGCTGGGGACCTGTGTGTACCTGTGGAGTGCCTGCACCAGCCAGGTGACCCGGCTCTGTGACCTCTCCGTGGAAGGGGACTCAGTGACCTCCGTGGGCTGGTCTGAGAGGGGGAACCTGGTGGCTGTCGGCACACACAAGGGCTTCGTGCAGATCTGGGATGCCGCTGCGGGGAAGAAGCTGTCCATGCTGGAAGGCCACACGGCGCGTGTCGGGGCGCTGGCCTGGAACGCCGACCAGCTCTCATCCGGGAGCCGGGACCGCATGATCCTGCAGAGGGACATCCGCACGCCCCCCCTGCAGTCAGAGCGGCGGCTGCAGGGCCACCGGCAAGAGGTGTGCGGGCTCAAGTGGTCCACCGACCACCAGCTTCTCGCCTCGGGGGGCAACGACAACAAGCTGCTGGTATGGAACCACTCGAGCCTGAGCCCCGTGCAGCAGTACACAGAGCACCTGGCTGCTGTCAAGGCTATCGCCTGGTCCCCCCACCAGCACGGGCTGCTGGCGTCCGGTGGTGGCACAGCTGACCGCTGCATCCGCTTCTGGAACACGCTCACGGGGCAGCCGCTGCAGTGCATTGACACTGGCTCCCAGGTGTGCAACCTAGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCACACACGGCTACTCACAGAACCAGATCCTGGTCTGGAAGTATCCCTCTCTGACCCAGGTGGCCAAGCTGACCGGGCACTCCTATCGGGTCCTGTACCTGGCCATGTCCCCTGACGGAGAGGCCATCGTCACCGGTGCTGGAGACGAGACACTGAGGTTCTGGAATGTCTTTAGCAAAACCCGTTCAACAAAGGTAAAGTGGGAGTCTGTGTCCGTCCTCAACCTCTTCACTAGGATCCGGTAAACCCACAGCTACCGGCCGTCCTGGTCGCAGAGCAACACCTTGTCAGCGTGCATGGACTCTCTGCTCCCCCCCACATGAGCCCAAGATTGGCAGTAGGGTGGGGCGGGAGCCGGGCCTGGAGAGAACCTGAAGATTGCATTAAAGCCTGATTGCGAACCCTGTTGGCCGGTGTTTGGGGCAGGGCCGGGGCGGGCAGCAGCAGGAGTGGGGCTCTGGCTCCCCACCCTGGGCGGCCCCGGCTCGGACAGCGTGCCCAGCGCAGGACAACTCCTGGACTGGCTGCTTCCATCACCTGTCACCACCACTGCCTCATCAGGGCTGCATGCTATGCCCGGAAGCATGTGCCCGCCGCCGCCCACGCCTGCCACAGGACAGGACAGCTGGACACCACGCCCATCGGCCAGGAGGGATCACAGGGACGTACCCTCTTGAAGGGGGTCTCTGCAGCCACCTCTGCTCTCCCTGACCCGGCCACCCCCCACTGACTCTGAGTGCATGACATTGGGAGCAGGCCCCAGGCATGCTACATGCCAGAGGTCATCTCGAGGTGGACTTGTTATCTGAGGAGAACTCTAGGGGGATCTGTCCACTGTCATGTGTTTACCCCAGCTGAGCCCTCCTTGTTGCTCACGGGGTCACAGGCAACTGTGATTCTTGGCGCTTGCAGGGTGACCAGTCAGGGTAGTCTGAGGGCAGAATCGATCCCAAGGATCAGGTCCTGTGGGTGCCTGGCCCTCCCCAGCCCTTCCTTCCAGGCTACCCTAGTGGGTCCTCTCTGCGCCTTCAGCCAGGGCAGGGGGCACCCCAGGGTCCCCCACAAGTTTCTGAGCTTCCCCTGGCTCTGGGCCCACCTCTCTGTCATGCTCCACCCTGTTTCCGCTGCACCTGGAGGAGACGGAGGAGGGAGGCTAGGCAGCTGTGGCCAGGGGCCCGAGCATGCCTCCCTTCTGAGGCGAGAGGACATGGATGGGCGTGGACAGGGTGGGGCGGACCCTGCAGAAGCCCTGCTCTTGGTTCTGAGTACCTTTGCCCCTCAGCAGCCAGCGTGTGCATGTGTACATACGTATTTGTGACTTTGCTTTGGATTTGTTTTTGTGTTTCTGTAAATTGGTCCCCAAATGTTAAGGCTCGCTGGCAGGGAGCAGTGACCTGCCCCCACCCCTGGGGAAAACAGGGGTCACAGCTCTTAAAGCCCTAGCATTCAGAGGGTGGGCGGGTGTCTGAACTTGGGGAAGGGTGGGCCTGCCCCAAGCTGCTTGCAGGGGGCAGAGGGACAGTGTGTACAGACATGTGTATGCCCATTGGTCCAGGTCTTATTTTTGTTTGAGTCTTTTTTTTTTTTTTAATAAGAAAACAGTCCTGTGTCTACCGCACCCAGCCTGGCTCTACTTGTGGGCCCCGCACCTGAGGGCACAGACAGGGTAGAAATGATGAAGCATGTGTTGTCTTCCAATGCAGTGGCAGGGCTGGGCATGGGAGCGGGCGGCTGGTGGGAGAGCCAACCACGTGGTCATGCCCAGTGGGGCTGTCAGTCTGTCGATGTGTTTGGCTCTGATGGTCCGCACTCAGCGTAACCCCAGAGCAGCCTGAATGTCACAAGCAGGTGTCAACAGGCTGAGGAGGCCACTTGCAGGTGGTCAACAGGGAATGCCAGTGTCCCCGAAGGCTTGGATCCCTGATCCTTGCAGCCCAGCTGTGGCAGGTTCTGTGGGAGTGAGAGGGTGGACCCAGGGGTGGTGGTATGAGTATGCAGCAAGGCCTGGCTCAGTGCCCTGGGCTGGGGGAGTGGTTGGGGAGGGGGCTGGGACTTGTTTCCATTGCTCCTAGACTGACAAAGGGGAAAGGTGTTACTGACAGCTGAGGGTGAGACGGGGAGGAAAGCAGCCAGGCTGGAGGAGCTGCGACACTGGATGGGCCCCCCAGGGGGTCCTAGAAGAAATTAGGTGAGGCCCCTGCAGTGAGCAGATGCCCATGACTGGTGGTACATCCTGTGAAGATCCTTGTCCTGGGCAGCGGGGACAAGGGAGGCCAGAGTCCAGACC EMBV3_34655 CACTACCGCGCCGTGAAGTGGCATTACAACGAACAGTCTTTACACGAAGCTCTCTTTGGG Gene GeneID:540812|LOC540812:XM_002697212:111_cdna Constitutive 0 NULL GeneID:540812 23 GENE LOC540812 NULL hypothetical LOC540812 EMBV3_25100 GTGAGAGATTCGCTTGCATTTGGTACAGGATGTTCATGTCTTCACCCCTGCCTCTTCTCC Gene GeneID:614959|SEL1L:XM_002691105:14_cdna UTR3_Alt 2 NULL GeneID:614959 10 GENE SEL1L NULL sel-1 suppressor of lin-12-like (C. elegans) EMBV3_16050 ACCCATGGACTATATAGCCTGTCAGCCTTCTCTGTCTATGGAGTTCTCCAGGCAAGAATG Gene BVT0102_191957 + 0 NULL GK000009.2:70876452-71245130 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40964 CCCGGGAAAAGAAGGTGACCCGGACGATCTTGGCTATTCTGTTGGCTTTCATCATCACTT Gene GeneID:522170|CHRM2:NM_001080733:676_cdna Constitutive 0 NULL GeneID:522170 4 GENE CHRM2 NULL cholinergic receptor, muscarinic 2 EMBV3_39746 GCGCCCGTGATCTACGGCCTGGAATTCCAGATCCACGTCATAGACTTTGACGACGAGAAC Variant GeneID:613935|TSSC1:XM_002689964:36_cdna 178^261 2 EMBV3_29018 GeneID:613935 8 GENE TSSC1 MGC128511 tumor suppressing subtransferable candidate 1 EMBV3_25432 GCCTCTGCCCTCCTCTTCTGGAGATGGTAATTCTGCTCATTTTGGACCTTACTATTAGGT Gene GeneID:514182|LOC514182:XR_082694:55_cdna Constitutive 0 NULL GeneID:514182 6 GENE LOC514182 NULL similar to CG10341-PA EMBV3_31918 CAGGAGTTGAGGAATCCGCTGGTGTTCTTCCTGGAGGCGTGGCTGGCCGACTTGATCTTT Gene GeneID:507401|OOEP:NM_001077869:36_cdna Constitutive 0 NULL GeneID:507401 9 GENE OOEP MGC157306 oocyte expressed protein homolog (dog) EMBV3_08352 TCCTTGGCTGCTTGGTAACCCCGGCTCTGGTACAAGGATGGGGAACTCGTTGCTGCAAAT Gene BVT0102_338888 + 0 NULL GK000002.2:20797705-20815863 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104623 TCONS_00104625 TCONS_00104626 TCONS_00104624 TCONS_00104622 TCONS_00104627 1 XLOC_062422 Coding TCONS_00104626 XLOC_062422 NonCoding Coding MIR10B 2:20797436-20801757 o TSS77427 738 2 TCONS_00104626_1 60 4 0.830092592592593 5.97004432060672e-105 0 1.61680147178353e-09 0 0.00010792292338126 0 4.13612148911975e-47 2.22477748598865e-08 9.40785657367624e-145 0 0 0 0 0 9.49607961386703e-14 0 0 0 0.00107201965299644 0.000617111367632708 4.45461962743297e-05 0 3.04336960547734e-39 5.58138539374511e-25 1.04958740039278e-05 0.000540586650745837 4.73945221238525e-05 0 0 0 NR_030976.1 MIR10B Bos taurus microRNA mir-10b (MIR10B), microRNA. 3e-43 179 100.00 0.132791327913279 NR_029609.1 MIR10B Homo sapiens microRNA 10b (MIR10B), microRNA. 2e-40 170 95.33 0.143631436314363 0 noncoding 1 0 1 1 -1.70422537463254 0.0248404527496802 0.0277879047260724 0.581612382689128 GGTTAAGAGCATACAAGTGCAGATGCTTGGTTCCTGGAGCAGCGATAGGAAAGTGAGAGGCTCCAGCTAGCGCCGGGTTCAGAAGCAGACAGATCTGCTCCCAGCTCCCCTGCCCACTAGGAGAGAAAACCAGTTCGGGACCGTGAGACACCACTGCTTACACCAGCCCCAGCCCAGGGCAGCTCCGTGCCTGCAAGCAGCGCCTGCCTCGGGGTGGTAAGCAGCAGCCGGACAGAGAGGCCAGCCGGGCTCAGAGCCCTGGAAGAAGACTGTCCTGACTCCTTGGCTGCTTGGTAACCCCGGCTCTGGTACAAGGATGGGGAACTCGTTGCTGCAAATTGCCACCAAGCACTTCAGACTACCTGAACTGTCTCTGAAAGTGAGGGTGGCTGCGTCGGGCTGGCGGCTCCAAGGAGGAGAGTCTGGGGCTGGCAACAGTCTGGGTACTTGCTCTGGGTGGAACCTGGAGGCAGTGACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCATGTAGTCACAGATTCGATTCTAGGGGAATATATGGTCGATGCAAAAACTTCACATTCTCCGCAATAGTCAGAAGTGGAGGCCAGAGGCAGTCGACCGGTCAGTTGCTTCTTTCTGTTTTATTACCTTGGACTCCAGGCAGGAGGATCGTAGGAGCCCAATTATGTAAAGTAGCCTTTTCCTGGAGAAGCTCCTCACCTTCAAACAGGGCCCCCTGTG TCONS_00104628 s 5' 0 TCONS_00104628 s 5' 0 EMBV3_21560 CTGGAGAACTACAGCCACCTCATCTCTGTGGGGTGTCACATTATCAAACCAGAAGTCATC Gene BVV0102_068836 + 0 NULL GK000025.2:39051760-39070439 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00147358 TCONS_00147351 TCONS_00147349 TCONS_00147359 TCONS_00147360 TCONS_00147348 TCONS_00147354 TCONS_00147350 TCONS_00147353 TCONS_00147357 1 XLOC_089348 Coding TCONS_00147359 XLOC_089348 Coding Coding - 25:39053690-39058413 - TSS109967 1842 3 TCONS_00147359_1 91 0.184039087947883 3 0.610546378653113 0 1.00452693637431e-246 3.53437615255013e-182 9.6298045561658e-238 0 0 3.16596518726424e-06 0 0.000334110226959629 0 0 0 3.16020027926777e-06 0.000939746775409677 0.000101213947845735 0.00117470980960226 5.69165956028335e-11 1.22998194810038e-40 0 2.15195940297263e-79 1.25939342851658e-200 0.000104346446039921 2.98828167470347e-05 0.000483483334075014 3.25765473367512e-151 3.9361281054788e-133 0 0 0.000196575115356837 0 XM_005225076.1 ZNF12 PREDICTED: Bos taurus zinc finger protein 12 (ZNF12), transcript 1e-111 408 100.00 0.12214983713355 NM_016265.3 ZNF12 Homo sapiens zinc finger protein 12 (ZNF12), transcript variant 1, 5e-71 273 86.46 0.123778501628664 TCONS_00147359_1 sp|P17014|ZNF12_HUMAN ZNF12_HUMAN Zinc finger protein 12; 6e-39 139 85.33 0.813186813186813 1 noncoding 0 0 0 0 0.015091599146479 0.941534492709903 0.0106747856806577 0.863128851126166 TAATCGTCCCTCTTGGTTTCCTCCTGTTATCGTCTCACACTTGTGCGGTGCATCCTATCAATTGTTGATACCTTCCTACCACCTGGAGTCCGTAGTTTATATTAGGGGTCACTCTGTGTTCAGGTCTTGACAAGTGTGTAGTGAATGGCCTTCAGCCACCAAAGAAGTACAGTATAGAACTCCTTTGCCACCAGAAACAACCCAGGGCACCTCCTGCTTGTCTCTCTCTCTCTGCCCCAGCCCCCAACAGCTGCTCATCTTATTACCGTCAATGTATTTTTGTCTTTTACAGAATGTCGCGTAGTTGGAATCGTACAGTATGTGGTCTTCTCAGACTGGGGTCAGTGTCATTCAGGGACGTGGCCGTGGACTTCACCCAGGAGGAGTGGCAGCACCTAGACCCTGAGCAGAAGACGACCTACAGGGACGTGATGCTGGAGAACTACAGCCACCTCATCTCTGTGGGGTGTCACATTATCAAACCAGAAGTCATCACCAAATTGGAGCAAGGAGAAGAGCCGTGGGTGGTGGAAGGAGAATTCCTGCTTCAGAGTCACCCAGGTGTGTGAGGGGGGTGGCAGTAAGGAGGGTGGTCACTCAGGAGTGTTTTTCCCTGGAGCTTTTTAATGGTGCCAAACCTGAGAAGTGACTGAAGAGTTGTTCTTGCACTCCGGCAACTCGAATCTCTCTCCCTAAGGCTTTTTCCTTCCCCACAGCAGCTTGTGTTGGTAGAGCTTCCCACTCTGGTTTCTGCTCTGAATCAAAACCTGCTCGCTTCCTTCCTCCTCTTAAACCTCAGAACTTCTTATGGCATTTTGTTGGCAGGCATATATATCGTTTGTCATTAGAGATAACTCCTGACTCTCCATGTCCTCATTAGTTTCTTTCTTCTTTCCCATGAAATGCCTCAGGCTTGTTTCTGTCCCTGGCTTCACTTCTCACTTCTCTTTCTTTGAGGTCAGAGTTCACACCCCCATCCTGTGCATAAACCAGTGAACTCAGTTCACCTGTGCTGTCCTGATCACAGGCGCTGGTCATTCCTGCTGGAGTTTGGTGATAGCATAACAGGGTCTCCCTATTCCACCAGATGCTCACTTTCATCTTGTCTCTTACTTTCTGTTCTGTCGGCAGTGTCTTGAATCATGTTGTGTCTGAGCAGGTGCTCAGTCAAGTAGGAGACAGAGAAATGAGTCCTGATTCATTTACCACCCCCACCCTGCCCCCTCCAGAAACATCCCTGAAGGGTCTGCCTCACCCTCTGGTGGTTTATTCCACAAGCTCTTTAGAAGGTCCTCCTATCTCAGGTATTTAAGGCTTTTATGTGTTTCATGCTACTCTGTCTACCTGTTGCTGGTTCAGTGTTTCCTGAGAGAGTGCAAATCTCATTGGATTTGCAAGATGTGTTCCCCTGACTTCTGAATCCATCTTATCACTAGTCTCACAGGATGAGCCAACAGCCATTCCCTGTTGATTCCTAAAGGCAGTTTAAATTCCTCTTCCTTTTAGAATCATACAATATTGTCCCTATGTTGCCCAGAAATTATAATTTTTTATTGTTTCCTAAACTTCATTTGGTCCACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCCCTCCTTAGAGTTTTCACTTTCAGCTCTAATACCAGTTTCTTCCTTCCCTCGACTTCAACTCCATCTCAAGGTGATGCTTTAGGAAAAAAATCTAGGTCTGATCAAGAAATCTGTTGACCGTGTTTTTTGCTTGGGCTTCTCCACCCACCCTCCTC TCONS_00147356 s 5' 1932 TCONS_00147356 s 5' 3308 EMBV3_26350 TCCCTGCTTCTCCATCTCTATGACTCTTGGTAGCCTTTCCAGCTATTTGGGGTCTGGGTA Gene GeneID:509758|BET1L:NM_001034362:5_cdna Constitutive 1 NULL GeneID:509758 11 GENE BET1L MGC127771 blocked early in transport 1 homolog (S. cerevisiae)-like EMBV3_13626 AGCCGGCCATTTTCAGTTACTCTACCAGAACCTCTTCACATAGACCTCTCAGTGCATTTG Gene GeneID:282531|GABARAPL2:NM_174675:61_cdna Constitutive 0 NULL GeneID:282531 18 GENE GABARAPL2 NULL GABA(A) receptor-associated protein-like 2 EMBV3_06697 CTCCGCAAGGGCGGGGAAGACCGCTTACAGACATTCTGGATAACAGCAAGATCATCAGTG Variant GeneID:511449|NT5C3L:NM_001075515:118_cdna 144^213 1 EMBV3_27403 GeneID:511449 19 GENE NT5C3L MGC140785 5'-nucleotidase, cytosolic III-like EMBV3_17708 GAGTGAATACTCATGAAGAAGGGCTGTGTGCAGAGACAGAAGGCATCACTTGAGGAGGCT Gene BVT0102_273289 + 1 EMBV3_37482 GK000019.2:28423640-28432862 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_34541 GGTCTTAAGATAGCTGGGATGATGTTCTTGCAAAACTGACATGGGGGCAAGGAAATGAAG Gene BVV0102_233056 - 1 EMBV3_22190 GK000006.2:90102799-90232761 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00209958 1 XLOC_128469 NonCoding TCONS_00209958 XLOC_128469 NonCoding NonCoding - 6:90105673-90106630 - TSS157465 957 2 TCONS_00209958_1 36 0.973876698014629 1 0 0 0 0 0 0 0 0 0 0 4.29936460816419e-06 0 0 0 0 0.000148672753540391 0 0 0 0 0 0 0.000124065639666776 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 -0.0653931236590401 0.669172027533824 -0.111258724519023 0.312784005403949 TTGAATGACCATGACTAACCCAGAAATTGGTACTGGAAGTGGAGTACTGCTAAAACAGTACCCTAAAATATGTTACATTGCCTTGGTGATGTAGCAGATGTTAGAGATACTGGCATCAGAGAACGGAAGGACACCCATGTTTTGCAGTGGCAAAAGAGGTGTTTAAACAGTTACCCATGATAATTTAAAAGCATATTATCCACCTATTGAGATTGTGACCCAGTAGAGTCTCAATAGGAAGAAATAGTTGAAAAGAGTCAAAGTAATACTGTATTTTGAGTTTTACTTTTAGTAAGATATTACTAAACAGATAAGCTCAGAAAACAGTTGCAGAAATGAACATGCATAAAAGTATTTGGAAAGATTGGAAAAGCAGAGTTTTTCTAGACCTTGAAGAGTAAAATATAAAGCTAGAAGAGGCCTTGAGTACAGTCCTGTCAAGATTTAGTCCTGGAACAAAGATCAGATCAAGACTTTGGCCTTTCCATCCAAGACCATTATTTTAGATGGTCTTAAGATAGCTGGGATGATGTTCTTGCAAAACTGACATGGGGGCAAGGAAATGAAGTAAATCATTTTTGAGAATTACATAAGCAAGAACTTTGGGTGTAGTTACTGGAAGCAAATAGATGATAGGACTAAACTTTTGAAGGAATTTTACCACTAATCAAATCATGAACCCAATTCAAGTTTGCTCACTTGAGGGAACTGTTCAACCCCAAATTTGCATAAGTAGAAAATAGGACATAAATGCTTTATAGCTCCCCAGTATTCACATAGGATGTGGCCATGGAGAATAATGGACAAAGAACATTTCAGAGGCCCATATGAGGCCATATAGAAGACAGAGGGCACATGTTTCTCTCCGAAACTAAGTTGAGATCTCATCAAAATTTCCTCCACTCTCAGGGGAGATGGATCAGAAAATTCCTGCTCAATATTTCATCCTTTTTATAT TCONS_00205744 TCONS_00205745 TCONS_00205746 TCONS_00205747 TCONS_00205748 TCONS_00205749 . 5' 2876 TCONS_00205744 TCONS_00205745 TCONS_00205746 TCONS_00205747 TCONS_00205748 TCONS_00205749 . 5' 2876 EMBV3_23213 AACGTTGTACTGGGTGCTGTGACATGGTATGCCCCATGCTGAGTGGATTTTGTCAACTAT Gene BVT0102_177318 + 1 EMBV3_07973 GK000006.2:60984422-61034008 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205247 TCONS_00205243 TCONS_00205248 TCONS_00205250 TCONS_00205245 TCONS_00205249 TCONS_00205246 TCONS_00205244 1 XLOC_124616 Coding TCONS_00205243 XLOC_124616 Coding Coding RBM47 6:61031592-61120096 j TSS153319 6612 1 TCONS_00205243_3 522 0.0539927404718693 4 0.925335864320983 6.13583903258677e-14 6.50790548909237e-26 2.21491651483368e-13 1.49483002906305e-11 3.12430059776005e-11 1.28283162240098e-11 1.29657027625166e-26 5.54405434252233e-79 2.80015116691658e-11 0.000591568112111134 3.64591533827149e-06 1.83258792870803e-06 1.61355788835675e-24 2.09429781228669e-62 5.9572066197126e-12 1.72457584473586e-37 3.98674508618917e-05 0.00592983733624363 5.57700399718083e-11 7.93812397534224e-05 1.88671141742483e-26 2.31534146421817e-10 1.81518852650627e-16 5.82559562268809e-05 3.03218405138606e-13 8.30775692129542e-26 2.83860108632849e-26 7.49676884159619e-25 2.25357382007012e-64 1.03350236020716e-29 XM_005207891.1 RBM47 PREDICTED: Bos taurus RNA binding motif protein 47 (RBM47), 0.0 7492 100.00 0.628100423472474 NM_019027.3 RBM47 Homo sapiens RNA binding motif protein 47 (RBM47), transcript 0.0 4226 84.68 0.571082879612825 TCONS_00205243_3 sp|Q91WT8|RBM47_MOUSE RBM47_MOUSE RNA-binding protein 47; 0.0 739 71.84 0.998084291187739 3 coding 0 0 0 0 -0.0171994618655198 0.869859042704024 0.00494826141480464 0.920706312036105 CCAGCAGGGGAAAGGGAGCTCCAGGTGTGTGGCAGGTCTCCACCGGCCGTGGATGCCTTTGACATTATGACCGCAGAGGATTCCACCGCAGCCATGAGCAGCGACTCCGCCACAGGGTCCTCTGCCAAGGTGCCCGAGGGCGTGGCGGGCGCGCCCAATGAGGCGGCGCTGCTGGCGCTGATGGAGCGCACGGGCTACAGCATGGTGCAGGAGAATGGGCAGCGCAAGTACGGTGGCCCGCCGCCCGGCTGGGAGGGCCCACACCCGCAGCGCGGCTGCGAGGTCTTCGTGGGCAAGATCCCCCGCGATGTGTACGAGGACGAGCTGGTGCCAGTGTTCGAGACGGTGGGCCGCATCTACGAGCTGCGCCTCATGATGGACTTCGATGGCAAGAACCGCGGCTACGCCTTCGTCATGTACTGCCACAAGAACGAGGCCAAGCGCGCCGTGCGCGAGCTCAACAACTATGAGATCCGCCCCGGACGCCTGCTGGGCGTGTGCTGCAGCGTCGACAACTGCCGCCTCTTCATCGGGGGCATCCCCAAGATGAAGAAGCGCGAGGAGATCCTGGAGGAGATCGCCAAGGTCACAGAGGGCGTGCTCGACGTGATCGTCTACGCCAGCGCGGCCGACAAGATGAAGAATCGCGGCTTCGCCTTCGTGGAGTACGAGAGCCACCGCGCCGCCGCCATGGCGCGCCGCAAGCTCATGCCCGGCCGCATCCAGCTGTGGGGCCACCAGATCGCTGTGGACTGGGCCGAGCCCGAGATCGACGTGGACGAGGATGTGATGGAGACCGTGAAGATCCTCTACGTGCGGAACCTCATGATCGAGACCACCGAGGACACCATCAAGAAGAGCTTCGGCCAGTTCAACCCGGGCTGCGTGGAGCGCGTCAAGAAGATCCGCGACTACGCCTTCGTGCACTTCGCCAGCCGCGAGGACGCCGTGCACGCCATGAACAACCTCAACGGCACCGAGCTGGAGGGCTCGTGCCTCGAGGTGACGCTGGCCAAGCCCGTGGACAAGGAGCAGTACTCCCGCTACCAGAAGGCAGCCAAGGGTGGCGGCGCAGCCGAGGCAGCAGTGGTGCAGCAGCCCAGCTACGTGTATTCCTGTGACCCCTACACGCTAGCCTACTATGGCTACCCCTACAACGCGCTCATCGGGCCCAACAGGGACTACTTCGTGAAAGTGGCCATCCCTGCCATCGGCGCCCAATATTCCATGTTTCAGGCAGCTCCGGCCCCTAAAATGATTGAAGATGGTAAAATCCACACAATGGAGCACATGATCAGCCCCATCGCTGTGCAGCCCGACCCAGCCAGTGCTGCTGCGGCCGCCGCAGCCGCCGCTGCCGTCATCCCTGCCGTGTCCACGCCACCGCCTTTCCAGGGTCGCCCAATAACTCCAGTGTACACGGTGGCTCCAAATGTTCAGAGAATTCCCACTGCCGGGATCTACGGAGCCAGTTATGTGCCATTTGCTGCTCCAGCCACAGCCACGATCGCCACACTACAGAAGAATGCAGCGGCCGCCGCTGCCATGTACGGCGGATACGCAGGCTACATACCTCAGGCCTTCCCCGCCGCTGCTATCCAGGTGCCCATCCACGACGTGTACCAGACCTACTGAGACCCGCCGCCGCCACTGAAGGAACACTTTACTATTTATGAAGAAAGACCGTGTTCGGTTAGCACACACGAAACCTGAACGCAAAGAATGTTATCAAATACCATACTGGAATATTTTATATTACATGAAGTTTTCACTAGTTTTTTAAGACTGTTTTCAATTTAGCAGACCTGTGTTCATACATTTCTAAGAGACTTGCAATGGTTTGTGCCTTAAACACCATCTCTTAAAAATTTGTATGTGGTAGTACATTTGTATAGAGGTTTTTGTTTTTGTATTTTTAAGGATATATTTTCAGTTATGAAGGTTATTTTCTTAACTTCTGCACTCCAGAGATTTCTATTTTGTAGTACCTTCAATAATATATCAAGTATATATTAAAAAAGCACACTTGAGCAGCTAGGGAACTATTTTGAAAAATATATTCAATATTTAAAGATACAAACAATAGTGCTTTAAAAATACTACAGAAAACATTATTTTAAAAGTTATACTGGAAAGTGCAATTATAAAATGAGTGAAACCTCTATTCTGCTGGAATTAAGGGTTGACGGGTGTTAACCACGTGTTATTCATGATGGTTCTGTTCTTTAAACGCTCGACCTCTCCTTAAGGCCAATGTTGAAAAGACTTGTCACACTTCTGAGTCCAAACACTGGAAGGCGCTGTCACCTGCTGCCCTCGTCCTGGGCCCCTACTCATTGTCCACGAGCCTTTGCTCTTAGATGTGTCCCCTCCGCCGCCCACCACTACCCTCCACTCACCCTCGCCCGCCCCCAACCTTCCCCAGACCCACCTTCATATTTGGCAAGTCAAGGACAAATTAATTACTCTGACAGAGAACATTGATGGCTTTTATACTTCTTTTTGTTAGGGTTTTTTGTTTTGTATGGGTTTTTGTTTAGGGAGGGTTGTGGTTTGGTTGGGGAGCTATTTTCAATAGCAGAGTATGTGTAAGCACAAGATTTTAATAGTTTGCATAAGGCATCTTTGCATAGCTATTTAATTGTCCAATATGAAACCTTCACTCCTTTCTTAATGCTTTTATTATATTTGTTTTGAAGTCTAAGTTTGTACAGACAGAGAATGTTATTATAGACAAGACCCCAAAGGCTCTTGTTAGCAGACGGTTATGCTTCTAGTTGCCTTATCATGTTTCATGCACAACGTCTGTGGTTGTCAGGGGTGTTGGAAATATGTTTATTGAACAGGGCCTCCCTCCGTTGTTGCTGTGCATGTGGCAAGTGAACTGAATTGGGGCGTGCACAGCCAGGAGGAGGAGGAGAGACCTGTAGGAGTAAAAGATAGTTTGTAAATATCTCCTAATGCTCATTTTTAGTTGTTTTATGTTGCAGAAATTCATGGTATATAGTTGAATGCAAAACAAAACCATTTTATTTCAATGTTATTAAACAGTTTTGTTTTATTAGGAAGTAAATGTATTGTTGCAGTGTTTTGTGCCTGTTTAAAGGCTTTTGTTTAGCAGAGTGAATGTAAAATACAGTAAAATGTTAAGATTGTCATCTACGTTATGAAATACATCAACTTGGAATTTTTTTTTTAAGGTTCTAACAAGGAAGTGAGGTGTGCAATAGATGGCAAGGACATAGTTGTGTTTTTATGTCATATTAGAGATTCCATCAAATGTTTCCACTCACTGAATTTTGCTGATGGCTGAATTCTTATTGTGGATTGATAATAGGATCATGCCCTTAGCAGATGTTTTAGTTCTGTTTTACATTTTAAATTAAGAGATTCCCAGATGCTCTCTTTTCCCTCATCTTAGGGTGGGATGAATTTTTTATATATAAGCAATATTTATTTAACTATTCTATAAGATTATTGAGTGCCTGCAAAGGCCTTTAAACATTCCTAGCCTTCCTTTCCATCATTGTTAAATGACAGAAAGTAATTGTGCAATGTTTTCTGATGATGCACCCAGCGAGCTGCATCCAAACTCAAATCCGTCGTAATGAGTAATCCAACCAAATGCAGTTCGCGTTCAGCCCCCATCCCTTGACTTTGTATGAAAGAAGTGCTCTCTTACTCTCCTTCCAGTGAAGGGTTAATTAGCACAGAGGTTCACTGGATGAGACTGACCCAGGGATCTTACTGTATTTTACATGTGCCTGTAAGTTATTTGCAAAAATGGAAAAAAAAAAAAAAAGGAAAAAAATGGTGTCTTAACATGGCAACTACCAAACTACCTTAAAAATAAATGTTGGTGACATAGCCAGTTAAGTATCAGTGAGCCTCCCACCTACCTATGGTCTGCCTGTTCCTGTTGTTTCAAAACCATTTCACATATATACACTACTGAGGTAAGTTTGTAACTTGAAATGTGAACTTTTTTTTAGGGTTAAGAACAAAGTATAAAAATGTTTAAAAAAAAAAAAAGCTTTCGAGTTCTCTGTTTTCAAACATGCTGGCAGTTTAGTTGTTATCTTTAGTGCTTTGTATTTGAAAAGCTTTTAAGTTTATTTAGATCTTGCTTCATTTACAATACATTCTTAGGATGTATGCAGTAAATAAAACTTTCTTAAAGCAATTTCAGTACCTTATTTTAAATTGTGTTTTCTTTATACACTTTTTTTTTTCCCCTAACAAAATTAGAAAAAAAACCCTATAGCATAGAAGGAATTGACTGTTTCTGGCTGGAGAAAATCATATCTTTGATTTGGAATTATTAATGAAGTTGAGGTACATAGTAAAAATTGTGAATTATCAGTGTTTTCAGCCTTGGGTCCAGGTGGTAGAAAGTTGAGCGTTCAACTACTACTTAGCATCTGGATCAGAGTAGGATGTGGCAAAGCCTGTCACTGTTCTCAGTGCTGAAGTTTGTTTATGATCCCAAGGGTTTTACACTTAGATATATACATGGACTCAGTTGATGTGACATTGAGTTGTTCGATGGTCTCATGAAAGTACTGGTGTGACCTGTATGTTGGTCACCGCACTGGAAACCACAGTCTTCCGTTTCACCTTTTTTGACAGCGTGCAGCAAGATTAGCAAGACACTGCCTTTTTCTCTATACATCATCACTAACTTCAGGTGGGATCCATCAGCAAAGCCAATTAACAATTCAAGGGAAAGTGGTAGCTTGTCAGTGGAATTACCTCTAAAAACTGCCCCACGCAGCTTTGCCATTGATTAAGAATTTTACCTAGTTAGTCTTGAGTAGCCTGGGTTATGGGCCTTCCCAACCCACAGTTCTTGGAATTCTAACTTCCTGCTTCCTCTTAAAAGGATAAAGTCTTTCTTACAGACAGGAAAGGCCAGAGAACTTCCCAAAATGAGAGATCAACGAGATTTGCTGATACCATCTAGTTCTAGGAGATGAGCACAGATGCCCTTTAAGTTGCAGAATCAGAGTTTGATTGCTCTTGTCAGAAAATGAATTAAAAGAATTAATCTTACGGAATATTTCTTCCACCTCTACTAAATGCCCTGCTTTGTTCTAGGTGCTGTGGTGAGTACAGCATGAACAAAACCAACAAAACTTTGTACACATAGAGCTTACCTTAAAGTGGGAGAACACAGACCCAATAAGCTCGTAAACAGTGTGTTGGGTGGGGATAAATGCTGTGATTGTGTGATTCATTAGGCTCTAAGGCTGTTTGGTTTCCATCACCTCGGGACCTCACAAGCACTTAGTGAAGTAGGCAGAACAGATATGTGACTGGCCAGGGTCCCACAGCTCGTAGGAACCAGGGCAGAAATTCAGACTCCAAGTCTCAGCACACTGACCCTGAAAATAGATTTAGTAGTACCAACAGCCTGCTTCACAGCCTACAAAAAGAAAAGCTTTTCTCCAAAAGTAGTTTCTTTTCTGTTGACTTTTAATGTGTTTTCACATGCAGCCTCTTTCCTCAGGATAGGAACTGAAGGTAGAATGGCTGAAATGCCTACGTTCAGCTTGGAAGACATAGCACTAGGTGAGCTGCTAAAATTCTCTGGTAGATGGAAGGAATTCGACTTACGATGCTGTGTCAAGGATTATGGATGGGACTAAAAAACTACTGTAAAGTCAACTATACCCTTCTGATTCTAAACTAGACTAGATCCCCAATTTTTAAATTCCAAAAATATCTGTCAAGACAACATGCATAAGCACTTATTTAGGTGGAAGTAAAAACAACTAGAACACAAAAGTTCTAATTTTTCTTTCCTAATGAAGGATAACCTGTGAACAGTCCCAACGTTGTACTGGGTGCTGTGACATGGCATGCCCCATGCTGAGTGGATTTTGTCAACTATAATTGACCTTACTGGCTTACCAGACCCTGTTTTAAGGGCATTAGGGTACTTGACTATTTTAAAGAGATGTATATAGTATATTACATGTTATCTTTATTATAAAGTGTTCTGGGAAGAGTTGAGTTTAAAAAAAATAATAAAACATGAAATGTGACATTTCGGCATGGCTGTTTTGAAAAAAATCACATTTGACACAACGACCCTAAAGAAAAAAAAAAAGCATCTTCAACTTTAAAAAATAAATTAGTGGTAGGATAACACAGATGTACTCATTTTATCCTTGTCCTGCCACTTCCTTGACACGCTCCTCCTCTCTGACCATTCAAGGGCAAGGGCATGATTAGGCTTAAACACAGAATGAGACTCAGGAGACATGTTTTGCTTCAGTTCCAAGTTCTAGGCTATCAGATTAGACATGGCCTTCCTTCTCCTTCCCCCCATTAGTCTTCCCTGTCTAGGTGCCTGGTGTCCCTCAGTGATCGCCCAAACCCTTGGCAAGCGCTGTGGCCTGGTGAAACAGGCTGGGCTTGCAGTCTGGATGCCTAGGGTGTGAACCCCCAGCTTTGCTATTTACCAGCCGTGTGACCTTGGAAAAGACACCTTGCCTCTCTGAGCACCAGTTTCTTAATTGGTAAAAGAGATGATACCCTCATAAGGTTACTGTGAAAATCAGATAGGTTAATGAATCTTTAAAAAGCCTGGATAAATAAATTTTTAAA EMBV3_39258 TCTGCACCGACTTCCTGAAAGGCTACTGCCCTCTGGGTGCCAAGTGCAAGAAGAAGCACA Gene GeneID:515615|ZC3H3:XM_002692590:320_cdna Constitutive 0 NULL GeneID:515615 14 GENE ZC3H3 NULL zinc finger CCCH-type containing 3 EMBV3_21839 GTGATCGTCATCGCGGTATGCTGTGCCTCCCTGGTGTTTCTCACTGTGCTTGTCATCATT Gene GeneID:616432|PRIMA1:NM_001077487:303_cdna Constitutive 0 NULL GeneID:616432 21 GENE PRIMA1 MGC134599 proline rich membrane anchor 1 EMBV3_18105 CTCAACCACTCTATGACTGGCATCCTTGGAACATGAAGTGGATACTGTTCTTTGGGGCCC Gene GeneID:512903|CPA4:XM_002686950:99_cdna Constitutive 0 NULL GeneID:512903 4 GENE CPA4 NULL carboxypeptidase A4 EMBV3_15419 GGGACTTAGTCTGATCTGAGGGAGGTAGTTTTGTGCATGAATAAACAAAGTAGATAACTG Gene BVV0102_322135 + 0 NULL GK000015.2:6654249-6671862 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060509 TCONS_00060505 TCONS_00060506 TCONS_00060510 1 XLOC_036757 Coding TCONS_00060506 XLOC_036757 Coding Coding BIRC3 15:6606127-6659648 j TSS45234 4104 1 TCONS_00060506_8 363 0.0394736842105263 10 0.923505231689088 0.000718260849999627 0.00103683205301959 0.000341983701782497 0.000328088100891622 0.000360731647849513 0.00021127945286303 0.000446012244937137 0.000267351281245293 0.000548437433096677 0.00107915979936008 0.000213650873958338 0.000108393401056538 3.34865164190052e-05 0.000534617815424163 0.000195947098662788 0.00169590862372984 0.000732864615350077 0.00171481867690942 0.00063326172723319 0.000583300417033484 8.50553044215137e-07 4.92387102271428e-08 0.000571170751845793 0.000193457979282829 0.000487862960336512 0.00041441561407238 3.0779849666157e-39 0.000394676563921427 0.000212261728611681 8.16190388736476e-05 NM_001035293.1 BIRC3 Bos taurus baculoviral IAP repeat containing 3 (BIRC3), mRNA. 0.0 2387 99.63 0.325292397660819 NM_001165.4 BIRC3 Homo sapiens baculoviral IAP repeat containing 3 (BIRC3), 0.0 2109 81.94 0.523879142300195 TCONS_00060506_8 sp|Q13489|BIRC3_HUMAN BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3; 0.0 650 84.85 0.997245179063361 2 noncoding 0 0 1 1 0.0163056420415085 0.906623629542042 0.0486672633770712 0.395076221603171 GGCGCCCGCCAGGTCTCGGCCGGCACATCCCCTCTGGCGCGTACCGGCGCGGGGCGGCGGTCGGGCGACCAGAACTGCGGTTTTACAAAAGAGAGGAACTGTTCTACTTCTAAATTTTTTTCCAGTTTTTTCTATAAAGCAAAACATCTGAAAATGGAGGCCTAAAACTCTTAAAAGGGACTTAGTCTGATCTGAGGGAGGTAGTTTTGTGCATGAATAAACAAAGTAGATAACTGGAGTTTTTTGTATCCAAAGAATGTTAATTTAAAAAATATGATCTAGTTATGAGAGGTATAATTACACAGTAATAATAGGTTTGATTCTGAATTTGACTTGTGGATATAAAGAAATGATTGTAGTCGAGACATATTGTTGAAATACTTTTTTTCAGAGTTGGCCAGGCAGTTTCCTACTGGCTGCTGTGTAGAATAGAAAAAAATTGTACCTGTATTTGGTAAAGATTTAAAAATGAATGACAGTTATCTAGAACAAATAATTAATATTCAGCCTTCTGCTAAGTTAGAGAAATATGCATATAAAACCTTTGGCATGTTAAAAGATTTCTGTAGTGACAAAGAAATGTCAAAACCAAAACTTTTTGATAGGTACAACAAAATAAGAGTAAGTATGAAAGATAAACGTGATGATTGGTAAAGAAATTAACCATTTCTAAGCCTATTGATATTTTGAAAGTCAAAAATGTAGTTTGTTCAAATGGGTTGTTATCTCTGAGAATAATTAGAATTAGAATGATGGGTGGATGTTTACTTTTTGGTAAACGAACAAACTTCAGAAAGAAACACAGAGATAGTCGTAACACCACATAGAGACAGTAATAACACCAAGAGTTTTATATTTTAAAATAACACAAATAATATTACACATTTTATAACAATGTATAAAATTATTGACTAATAAAAGGAATACTGAAGTTAAACAAAATAATTCACCTTTGAGGGAAATAATCACTAATATTTCTGATGCCACCTGGAAAGAAAGCATTGAAGTCTGTAGTAAAAAGCCTCAATATATATGAGACCCAGGAAACATGCTTGCAAATCACTTCTGGAAGAACCATGATGACTTGTTTATTGGTCATTACTGATACTATCGATGTAGACCTGCCTACTGGTAGATAGTTTTAATTGAGAAATTCTGGATTTTGAGGTCTCTGTTGTTCAAAAGAAGTGGATTGTGACAAAGTAAATTTATTATGTTTTGTCAAGATAAATTCTGGTTCAAGGTATACTATCTGTGAAATAGTTTCTGACCAAAACCAAATTTTTTAAATCCATCTGTTTTTTGTTTGCTTGTTTAAAATTTATTATCCATCTTAGCTTGGAGACTCAGCACTCTGACTTTTGACTGTTTTTAAAAATAAATTCACTATCAGGAGATTTGATGTTGGCTTTCAACAGCATGGAGCTGAGCCTAAAAGATCAAATGAGCAAATATACCCATCTCTGATAGTTTATTTGAAGTGGAATGTTTAATTTGCTAAGATCTAGAGGCATCACTATGACTCAGCAGTCAGGTACCTATCTATGGAAGTAATTATTATTTAATAAATCTTGAAACCAGGTCTTAAGATCTGTGAGCCAATTCTGTTACTACTTAAGTTCTTCATCTGGAAGAAAATTTTGGATTGTTTTCTTCTCCCCATTAAAATGGTTGCAGGAAGAAAAATTAATTAATTTGAGCAAGATTTAGGATATACTATATTTCACTGAATCTAAGATGTCATCATTTGTAAAGCACGCCATTATTTTATGTACCTCCTAGAAATAAAAATCCTGTTAATTAAAATGTGATATGCCATTGATTGTAAGATACCTCTCCATAACAGAGATATTGAAACATGTGCCTTAGAGTCAGTGAAATATAATAATCTATTCTTTTCTCCTTTTGAGGTAGGTTTTACACTTTCTTTTCCCTGGCTCCAAAATTTCACAATTTAAAAAAATCAGAATAAGTATAGTTTGAATATTCTTGTGTATATGGGACACTTATGCAGGATAGCTTTCTGCCAAAACAAACTATGTGAGACATTTTATCTTCAGGCTGACCGAATGTCAATGAAGCATATTAGTGGAGAGGGTGACCTACTTGTGGAGACACCTGACACAAAATGGCGTCTTGATGACCTAACGCATTCTACATTTTTATGAAGGTTTTAATTTTCATCACAAGGTACTGTGTAGCATCATGTTTACATTGTATATATCAGGAGTATGCAGAGGTACAAGTTGTACATAATTGTCCCTTAAAATGTATCAGTATAGGATTTAGAATCTTGCCATGCTGTAATCCTAAATGCATAGAAGAAAAAAGAATGAAAGATTTCCTGTTCTAAGTGTTCAACCTAGTACTAAAATTAATAAAAATCAAAAGCCATGCACAAAACTACCTCCCCAGAGAAAGACTAGTCCCTTTTCCTCCCCATCCATTTCATTATGAATATAGTAGAAAATAGCGTATTCTTATCAAATTTGATGAAGAGTGCCAACATGTTTGAACTGAAGTATGACTTTTCATGTGAGCTCTACCGAATGTCAACATACTCAACTTTCCCCGCCGGTGTACCTGTCTCAGAAAGGAGTCTTGCTCGTGCTGGTTTTTATTACACTGGTGTGAAAGACAAAGTCAAATGCTTCTGTTGTGGACTGATGCTGGATAACTGGAAACAAGGAGACAATCCCATTGAGAAGCATAAAAAGTTGTATCCTAGCTGTAGCTTTGTTCAGAATCTAAATTCAATTAACGTTTCAGGAGCCTCTTCTCAGCCTACTTTTCATTCTTCATTAACGAATTCCACACATTCACTACTTCCCAGCTTGGAAAACAGTGGCTACTTCAGTGGCTCTTATTCAAGCTTTCCATCAAATCTTTTAAACTCTGGACCAAATCAGGACTTTTCTGCCTTGAGGATAAGTTCCTACCCTTGTGCAATGAATACTGAAAAAGCCAGATTACTTACCTTCCAGATGTGGCCGTTGACTTTTCTGTCACCAACAGACCTGGCAAAAGCAGGCTTTTATTACATAGGACCTGGAGATAGAGTGGCTTGCTTTGCCTGTGGTGGAACATTGAGCAATTGGGAACCGAAGGATGATGCTATGTCAGAACACCTGAGACATTTCCCCAACTGTCCGTTTTTAGGAAATCAGCTCCAAGGCACTTCAAGGTACACTGCTTCTAATCTGAGCATGCAGACATATGCAGCCCGCATTAAAACATTCTGCAGCTGGCCCTCTAGTGTTCCAGTTCATCCTGAGCAGCTTGCAAGCGCAGGTTTTTATTATGTGGGTCACAGTGATGATGTGAAATGCTTTTGCTGTGATGGTGGACTGAGGTGTTGGGAATCTGGAGATGATCCATGGGTGGAACATGCCAAGTGGTTTCCACGGTGTGAGTACTTAATACAAATTAAAGGACAAGAGTTCATTAGTCGAGTTCAAGCCAGTTACCCTCATCTACTTGAACAGCTGTTATCTACTTCAGACAATCCAGAAGATGAAAATACAGAGTCACCAATTTTTCAATAAGGACTTGGAGATGACCTGTCATTAATCCGGAAGAATAGAATGGCACTTTTTCAACATCTGACTTGTGTGCTTCCAATTTTGGATAGTCTCCTAACTGCCAGGGTGATTAGTGAACAAGAACATGATGTTATTAAACAGAAAACACAAACATCTTTACAAGCAAGAGAACTGATTGATACTATTTTAGTGAAAGGAAATTTTGCAGCCACCATATTCAAAAACTCTCTACAAGAAATTGATCCCATGTTATACAAGCGTTTATTTGTGCAACAAGACATAAAATACATTCCTACAGAAAATGTTTCAGATTTACCAATGGAAGAACAGTTGAGGAGACTACAAGAAGAAAGAACATGTAAAGTGTGTATGGACAAAGAAGTGTCCATAGTGTTTATTCCTTGTGGTCATCTAGTAGTTTGCAAAGACTGTGCCCCTTCTCTAAGAAAATGCCCTATTTGTAGAGGTCGCAACGACGATGTCAAGTGCTTTTGTTGTGATGGTGGCTTAAGGTGTTGGGAATCTGGAGATGACCCATGGGTAGAACACGCCAAATGGTTTC EMBV3_37609 TCGTTTACTTATAGCGAGAGCATCCTGTGTCCATTGTTAGCGCACGGGAAAGTCTCCAGC Gene GeneID:532785|HADH:NM_001046334:59_cdna Constitutive 0 NULL GeneID:532785 6 GENE HADH MGC128368 hydroxyacyl-Coenzyme A dehydrogenase EMBV3_22895 AAATAAACTGGCCTGTGAAAACCCTGAATCTGGAGCTGACCAGGAGGAGAAGCTGTATCC Gene GeneID:534211|BIRC6:XM_002691220:50_cdna UTR3_Alt 2 NULL GeneID:534211 11 GENE BIRC6 NULL baculoviral IAP repeat-containing 6 EMBV3_32247 GAGAAAAAGATGCATTCTACAGTTACGGAGCTACAGCCACTCCAAGTGCAAGAGAGCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03913 CGTCCGGTCTCTCAAGGTGGAATGTGGCGCAATCATAAGGAGTCTAAGATTACAATTTTT Variant GeneID:282202|CRYBA1:NM_174523:34_cdna 220^361 1 EMBV3_08194 GeneID:282202 19 GENE CRYBA1 NULL crystallin, beta A1 EMBV3_07191 ACTCTCATGCAGTGTCTTTCTCCTTGGGAATCTTTCCACCGGGATGGGTTTTTGATAGGG Gene BVT0102_023854 + 1 EMBV3_25683 GK000016.2:74850198-74993030 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00070219 TCONS_00070220 TCONS_00070218 TCONS_00070221 1 XLOC_042159 NonCoding TCONS_00070221 XLOC_042159 NonCoding NonCoding - 16:74940524-74944188 - TSS52185 3568 2 TCONS_00070221_1 137 0.110706278026906 2 0.0264810264810265 0.00016255810320314 4.53090658721257e-05 0.000268947006673619 0.0002237090753923 6.79960457303186e-05 0.000350063334305391 3.84780594931543e-15 0.00017299200551166 2.78912196574634e-05 0 2.3957915757499e-09 2.45379299338796e-05 3.10833426541176e-05 6.85851964639088e-08 2.0930969396419e-174 0 0 2.55297823970442e-08 8.33790687930869e-05 0.000333053746540458 8.84066541443491e-12 2.17088951415393e-08 0 0 0.000285316540462487 3.30870781280545e-05 0.000367719388872704 8.40696099854512e-09 0 0 0 noncoding 1 0 1 1 -0.192842298883604 0.261927214603947 0.020309288531181 0.791241016336356 GACATACTAGGTTAGAGGAACTCCAGCAAAGAGGCTGTTGAGAAGGGAGTGTGTGGGGTTGGGGTTGGAGGAAAGAAAGGAGCAGCTTCATAAACTCATCACCCATCTCCCTCTCCCGTCCAGTCTCCACCCCGTAGAGTCTGTCATGCCACTTCGCTGAAGGATGGGTCAGACCATGCTTCCTTTACCCAAGGTGTGCCCTCTGCACATCCACCCCTTCATCTCCACTCCTTCTGCTCATACCAGGCAAACAGTGAGGCCCACCCACTCCTGTAGCCCTATCTCCTCCGTCTCTTTTCAGGGACAGGCCTCTATCCTGCCCCTGCTGCCGGGGGAGATAGGGGCCCTACGTTTCTCAGAAGGCTCCCTCATTGCCTTCCTCCTGAGGCCCAAGTCTGGCGTATCTGGCCATGCCCTCCGCACCCCCCGACCCTTCCTGGAGCAGGCCCCCTCCTCAGCTTCTGAGAGCCTCAGGAAGAGAGTAGACAGGAGGGAAAAAAGCAGCTCTTGTACGAGATTAGCCTTTCGCCTGTCTGAGGCTGGATCCTGCCCTCCCTGGGGGGCTCAAAGCTCTTAGGCTTCTCTTCGAGCTACCAGGCAACTGGCAGGGACTAAAGAGCTTATGTTTCTTAAGTGGGAGTGGCTGGTGTTTATCAAAGACTCATGTGCGGGCTCCAGAGGCCCCTCTAGACGGTGGTGGAGGCCTGTCCCGAGCTCTGTGGAGGCAGGAAGTTCCCGGCTGGGCTAGGGCTTGCTGGCTTTGCTGGAACACTGGCAGGATCTGAGGGAAGCATTCCTCACGAATGTCTCCTTCAGAGGCTGCTGGATTCCTTTAACAGCTAATTAGTGAGAAGTCGCTACTGTGATGGGGGCTGACCCAGGCCTTCCTCCACCTCCTCCTAGGGGTCAAGGCCCCCGGGGAGGCTGGCCATGCTTTACTACGGCCATATTTCCTCCCCGACGTCAGCTGTTTCTTCAGGAGTCATCTCTCCAGCTTTCAGCCTTTTTTTTTTTTTTTTTCCCCTTCAGAAACAGGCTTTTCCCTGACAAGTTTGCAGCTCAAAAGGAGCCGGCTCCTCTTAACTGTTGAAATCAGGCGCATCTGGAAGCAGTAAACTTTTCAACAGGCTGAGAGGAAGAAAAGACATATTGTAGGGGATGGATTCACCTCTGGGACTAATTATTCTTTATATTTCACCCGTCACATTTACAATCTTCGTCAGAGCAAAGAGACAATAAATGATCTCATTAAAACCCAGAAAGATGCTTCTCCCTGTTGAGAAGAACCTTGTCTCAACGCCCTGATCTCTGACGAGAGGGTCGTGTCAAGGAGGCTGGCGTGGGGCCTGGGGACCAGGGATGGGAGGGGCAGGGCTCTGCCAAATGTTTTCCCTTGTTTGAATACAGTATCTTATTTTTTCCATCACTGGAAATATCCTTGTGAGTCTGAAATCAAAATCTTCTCCAGCCACAATTTTCCCCCAGAGGCAGAATCCTGTTGGGGGTGGAGGGGGGTGGGGAGCACAGTGACCCAGAGAGAGAATGGGATTGTGAGGTTTAAAAAAGTATCTACACCAAGAGAAAAAGCAAGAAAGGGAGGAAGAAAAAAAAAATTATCTCAATCATCTCTCTTCCCTATCAAAAACCCATCCCGGTGGAAAGATTCCCAAGGAGAAAGACACTGCATGAGAGTCTTCCAGGGCTGGGGGGACTCCCACAGAGCCATCTCCCTTTTCCAACTGTATGTAGGGGTGCCCAGAAGGGGCCACCACCCCCTAGAGTCCTCCCAGTCCACAACTCCTTATCCTCCACCAGCCCCAGTGGCTTTAGGGCAACTTAGAAGCGATTCCCCCGCTCCTACTCGAATCCCCAGTCCCGGGGATGTGCGCAGGAGGAGAAATTCTCTCTCCTGGCAATCTTCCCAGGCGTTGGCCCCGAGGTGGCCATGCTGCTGGGAACTCCTGCTGAAGGGGGCTGATGGGGTCCAGGGCCTTGCTATTTAAAGTGTGATCAGAAGCATTAACATCACTTGGGGAGCCCCTTCCACTCCCACGTCTGGGACATTTTAACAAAACCTCCAGGTGATCTGTATGAATACTAGAGCTTGAGAGGTAATGCCCGAGGCCAGAGTTTCTCAATTTTTCTCTTAGCTCAGCTCACCTGGAGGGCTCTTTAAACCTCAGGATGCAGACCCTTAACCGCAGAGATTCTGACTCAGCTGGTTGGAGAGGCTGCAAATTTGTGTTCAGATACATCTGCAGGTGGTATGGTTGCTGCTGGTCCAGGGACCACACCAAGCTGATTCTCAAGCATTCCTAGGTGCCACTTGAAGAAATGCAGATTCAAAGGTCTTGTCATCTAGTAACAGGGTCGATAGAACAACAGGCATCTAACACAGCTGACGGCACTGAGTGAATGAGCCAAGATTTGAACCCAGATATGCCAGACCTATGCTTTCTCACCTCATCACAACTTGCCTTAAGAAAATCATTTTCAAGATGGTGAGTCCATTTCAATTATTTTAGCTTCATGATCATAGTTGAGTCAGCTGTTCATAGGGTTTCCCAGAGGTGATTTTATGGGTCTCTGGAGCCTGGTTAATGAAAAGATAAGACTGTTTGGTGCTGAACAGCATCCACCGCCATGCTGGTAATATCCTACTTAGAAGCACACCAAATAAAGTCAGTGTGCTTTCTCTGACCTTGCCTATCCTTTCACTTTACCCTTATGAACAGTTTTGTTTTTGTTTTTTTTTTTAAGAAAAAGCTAAAAGACCCAACCCTTTCTTTGAAGGTCAGAATGATCAGCTTTTGATTTAGCTTGTCTGAATTGATGAGTTCACTGTGTATCCACCTCCAATGCTGATCACTGCTATAATGCCCAGTGAAGCTTTTTTTTTTTAAAGGCATTTGCTTGCTTTGTAAGAACTAGCTGTTGACGGAAAAAACAAACAACCCACACAACATTGTATGCCGAGGGCCATATTTATGGGAAAAAAAAAATCTTCCCCTGAATCTGTCCTCAGATCTTTTTAAAAGTTCAAGTTGAGACGAGGTTTCCAAGCTGGCTCCAAAGGAGAACAATGCCCTCTGGGTGTGGGTGTGGGATTGGGTGCAGCTTGTCTTCCGGCAGCTTTTGAACAGGTGTCCAAAAAAAAGGCCAGTTTGAAATAAAGGCTCTTTTTGCCTCAAAGAGAGCCATGCCTAGGTCAGAAATGTCCAGAGGTGTCTTTGAAGGAAACAGACAAACAAACGAACAAACCAGCTTTTCTGCTCCCTGGTGTCTGGACGGGAGCAGAGCCGGTATTTTCCCATTGCCTTGGCACTTTCTCCCACAGGTGTTTCTGGAAGCGCCAAGATCAAATTACTAAGCCATTTTCTGCCTCACAATTACTTAGTTGAGTTTTTAACTTGTAAAACTTTCTTCTTTCAAAGTCTAGTGTTACATTTATTTTCCCTCTCCGCCCTCGCCCCACAGGGGTGAGAATCAAGGTGTCATTAGCCATCCCCAGAAAGGGAGCCAAGGGTGCCTCTGAGATGTTGTAGCCAGGAAGTATTTTTAGAAATTG TCONS_00070222 TCONS_00070223 s 3' 50119 TCONS_00070222 TCONS_00070223 s 3' 47619 EMBV3_23413 AGCAGACTATGTGGAACGTGGGCAGGAACATGTCAAGGTGGCCCTGGAGAACCAGAAGAA Gene GeneID:508675|STX4:NM_001035064:275_cdna Constitutive 0 NULL GeneID:508675 25 GENE STX4 MGC128969 syntaxin 4 EMBV3_14520 AGCTGTGAAGACTGTGAAGACACCCTGGAAGGCTGGATGCAGGGGACTGCTTCTCTTTAT Gene GeneID:100298704|KDELC2:XM_002692967:17_cdna Constitutive 0 NULL GeneID:100298704 15 GENE KDELC2 NULL KDEL (Lys-Asp-Glu-Leu) containing 2 EMBV3_12845 CCAGGCTGGGAACACAACTGCCTTGAGCGTCCTCTACGCGGTCTTTGGGAAGCGCGACAT Gene GeneID:538858|LRIT1:XM_002698894:46_cdna Constitutive 0 NULL GeneID:538858 28 GENE LRIT1 NULL leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 EMBV3_20932 CCTGATTCCCCAGAACCTCCAAATAAAAAGCCTCTTGTTGAGATGGATGAAACTCCACCG Gene GeneID:541109|C5H12orf11:NM_001046499:20_cdna Constitutive 0 NULL GeneID:541109 5 GENE C5H12orf11 MGC137384 chromosome 12 open reading frame 11 ortholog EMBV3_21414 TCTTGAAACGGTCAGAAATTTTTAGAACCGTTAATTTAATATATAAATCTGTCCGTGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30175 GAAGTCATCACCTTTCTGTTGCACTTCCACAGCTTTAAGGACCCCTGTGACTATGTGCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_34974 AGGGGCCCATGCACCCAGAAATTGCTTTATGAAGACACCCAGAGGTCAAGCCTGTGGCTT Gene GeneID:511079|ASTL:XM_002691130:125_cdna Constitutive 0 NULL GeneID:511079 11 GENE ASTL NULL astacin-like metallo-endopeptidase (M12 family) EMBV3_27104 TCTTCCGCCTGGAGAACGAACATCTGAATAACTGTGGTGAATTCCGTGCTGTGCGGGACA Gene GeneID:536550|XPR1:XM_002694203:35_cdna Constitutive 0 NULL GeneID:536550 16 GENE XPR1 NULL xenotropic and polytropic retrovirus receptor EMBV3_01899 TCTGTCTCTGAGGGAATCTACCCCAGCAGCCCTCACCCCCGCCCCAACCTTACACTGCCT Gene GeneID:100125231|LOC100125231:NM_001103311:2_cdna Constitutive 0 NULL GeneID:100125231 X GENE LOC100125231 MAGED4 MGC166326 melanoma antigen family D, 4-like EMBV3_00463 TTGATAGGGAGTCTAGGGGTCCCCAAAGAGAGAAGGGTCTGGAATTCTCAAGGAGGAAGA Gene BVV0102_342588 + 0 NULL GK000017.2:1-59292 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00166913 TCONS_00036105 TCONS_00238581 TCONS_00129710 TCONS_00118490 TCONS_00011700 TCONS_00012285 TCONS_00059696 TCONS_00250599 TCONS_00040981 TCONS_00165977 TCONS_00219592 TCONS_00125637 TCONS_00118456 TCONS_00040258 TCONS_00111186 TCONS_00145751 TCONS_00250203 TCONS_00031886 TCONS_00133817 TCONS_00233473 TCONS_00234240 TCONS_00246739 TCONS_00174808 TCONS_00211020 TCONS_00118491 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251851 TCONS_00251720 TCONS_00132067 TCONS_00250681 TCONS_00145750 TCONS_00072261 TCONS_00055707 TCONS_00174805 TCONS_00204211 TCONS_00171428 TCONS_00207933 TCONS_00174806 TCONS_00188145 TCONS_00031972 TCONS_00059695 TCONS_00161822 TCONS_00238985 TCONS_00188520 TCONS_00118487 TCONS_00232824 TCONS_00089291 TCONS_00002600 TCONS_00036106 TCONS_00199364 TCONS_00207485 TCONS_00229794 TCONS_00031759 TCONS_00099018 TCONS_00209974 TCONS_00000529 TCONS_00206299 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00103962 TCONS_00251625 TCONS_00246740 TCONS_00061493 TCONS_00220566 TCONS_00118459 TCONS_00118040 TCONS_00056144 TCONS_00210913 TCONS_00204210 TCONS_00019195 TCONS_00010963 TCONS_00252081 TCONS_00124524 TCONS_00216950 TCONS_00241019 TCONS_00110425 TCONS_00123823 TCONS_00001867 TCONS_00174809 TCONS_00242064 TCONS_00162767 TCONS_00125353 TCONS_00018601 TCONS_00080713 TCONS_00022895 TCONS_00107436 TCONS_00118488 TCONS_00078426 TCONS_00170890 TCONS_00206300 TCONS_00018602 TCONS_00010280 TCONS_00205125 TCONS_00228562 TCONS_00056149 TCONS_00221350 TCONS_00125692 TCONS_00118489 TCONS_00168038 TCONS_00175330 TCONS_00061494 TCONS_00001866 TCONS_00218901 TCONS_00006385 TCONS_00007850 TCONS_00001865 90 XLOC_105290 XLOC_072622 XLOC_101749 XLOC_021081 XLOC_145248 XLOC_078423 XLOC_072644 XLOC_007251 XLOC_007831 XLOC_036486 XLOC_153542 XLOC_024793 XLOC_100817 XLOC_132911 XLOC_077179 XLOC_024074 XLOC_067086 XLOC_088920 XLOC_153146 XLOC_018131 XLOC_081223 XLOC_142955 XLOC_143719 XLOC_151107 XLOC_104695 XLOC_129530 XLOC_142312 XLOC_069472 XLOC_154792 XLOC_154661 XLOC_080699 XLOC_153624 XLOC_044030 XLOC_033515 XLOC_124371 XLOC_103815 XLOC_126448 XLOC_114188 XLOC_018217 XLOC_098707 XLOC_145651 XLOC_114563 XLOC_142307 XLOC_054076 XLOC_000643 XLOC_121017 XLOC_126001 XLOC_139288 XLOC_018004 XLOC_059261 XLOC_128485 XLOC_000141 XLOC_124877 XLOC_120473 XLOC_103679 XLOC_062257 XLOC_154566 XLOC_036985 XLOC_133883 XLOC_072206 XLOC_033947 XLOC_129423 XLOC_009875 XLOC_006514 XLOC_155022 XLOC_076070 XLOC_131385 XLOC_147683 XLOC_066329 XLOC_075375 XLOC_000454 XLOC_148728 XLOC_099648 XLOC_076895 XLOC_009288 XLOC_049597 XLOC_013565 XLOC_063346 XLOC_047314 XLOC_005831 XLOC_124587 XLOC_138526 XLOC_033952 XLOC_134666 XLOC_077234 XLOC_102874 XLOC_105112 XLOC_132220 XLOC_001948 XLOC_003410 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_01805 AAAGAGAAGTTCCTGCACGAGGTGGTGAAGATGCGTGTGAAGCAGGAGGAGAAGCTGAGT Gene GeneID:506127|SKI:XM_002694180:633_cdna UTR3_Alt 2 NULL GeneID:506127 16 GENE SKI NULL v-ski sarcoma viral oncogene homolog (avian) EMBV3_43471 TTCCTGGGAGCTGGGTCTGTGGCGGGGACCCCGCCGCCGCCGGAGCCGGCGGGGAGATGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_19378 AGAAGGAATCAATGGCAGGATAACTGAGGCATAAGAACAGATTCGGGCTTCCCTTGTGGC Gene BVT0102_389551 + 0 NULL GK000013.2:65110721-65160048 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38729 CATCTGGAGAGAGACATGAAGGCAGTGTTGATTTGCAACAGGGATTCAGGGTGCTACCAC Gene GeneID:100336534|LOC100336534:XM_002694029:31_cdna Constitutive 0 NULL GeneID:100336534 16 GENE LOC100336534 NULL hypothetical protein LOC100336534 EMBV3_02079 TGGGAGCAATATCCTCGGTTCCGAAGTGGCCTTATTCGCAGGGATAGCTTCAGGATGCAT Gene GeneID:100139818|EFNB2:XM_002691986:2_cdna Constitutive 0 NULL GeneID:100139818 12 GENE EFNB2 NULL ephrin-B2 EMBV3_09231 GGAGGAGCGAGAACTGCAGGAGGTGGAGAGCGCCAGAGGAATTGACAGTGATGGATTACC Variant GeneID:508115|NGRN:NM_001045992:89_cdna 207^752 1 EMBV3_23951 GeneID:508115 21 GENE NGRN MGC137811 neugrin, neurite outgrowth associated EMBV3_10772 AATGGGAAAGGTAACCTTATATAGTTTAAATGTAAAAATTTTAGATTAGGGTTTGGGCTC Gene GeneID:540845|ALG11:XM_002691795:423_cdna Constitutive 2 NULL GeneID:540845 12 GENE ALG11 NULL asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast) EMBV3_08970 GCCAACAAAGCCACAGTTTAGACCCTGGTATCAAAAAGGCCATTCCTCCTGAGAAGTCCC Gene BVT0102_139624 + 0 NULL GK000015.2:54730436-54785593 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08059 TCACTGTGTGACCAGGTGGATATTTACGAGTTCCTCCCATCCAAGCGCAAGACTGACGTG Gene GeneID:282073|ST6GAL1:NM_177517:33_cdna Constitutive 0 NULL GeneID:282073 1 GENE ST6GAL1 SIAT1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 EMBV3_21806 GTATCCCTTGTTGAAACTTGCTTGCACTGACACCTACATTATTGGCCTCACAGTGGTTGC Gene GeneID:511653|LOC511653:XM_002683697:5_cdna Constitutive 0 NULL GeneID:511653 9 GENE LOC511653 NULL similar to olfactory receptor 1239 EMBV3_33046 CAAGAGCCAGCGGTGGACTGGGGAGAGGAAATATGGCTGACTTCCGGAAGTGTTTTGCAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31373 ATTCCGGCGGCTGCCGCGACTCCGGTGCAAGGTGAGGACAGCATGAACATCCCTAAGTGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17153 GGCACACGATGCTTGTGCATGTGGAAACTTAGCGACTGTCAACATACATTCTCAGGGATT Gene GeneID:538841|ZSWIM6:XM_002696311:6_cdna Constitutive 2 NULL GeneID:538841 20 GENE ZSWIM6 NULL zinc finger, SWIM-type containing 6 EMBV3_19920 AAAAAACCAACCAGGGAGTGTGAGCCCCTGTCTGAGCCCAAGGAAGCAAGGCAGCGAAGA Gene GeneID:509084|CAMKK2:NM_001075390:105_cdna Constitutive 0 NULL GeneID:509084 17 GENE CAMKK2 MGC139717 calcium/calmodulin-dependent protein kinase kinase 2, beta EMBV3_36645 TTGCTGGTCTGACAACGGCCCAGCCATTCCTGTTGAGTATGACTTTGGTGATGCTGAGAA Gene GeneID:100300695|LOC100300695:XM_002685891:96_cdna Constitutive 0 NULL GeneID:100300695 3 GENE LOC100300695 NULL similar to intelectin 2 EMBV3_13933 GTTCATGAGAGAAGACTACGCATCGAAGCAAAGGAACGGGTGAAGTCTGTATTCCATGCC Gene GeneID:100336482|LOC100336482:XM_002689670:20_cdna Constitutive 0 NULL GeneID:100336482 8 GENE LOC100336482 NULL vacuolar protein sorting 13A-like EMBV3_14655 CATATGTGAGAATGAGGTATGCTGAGTGGGATCATTGCGAGGGTATCTGAGGTGCGGGGG Gene GeneID:507456|AGPAT4:NM_001015537:2_cdna Constitutive 0 NULL GeneID:507456 9 GENE AGPAT4 NULL 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) EMBV3_08310 CCAATCCCGCTTCTTCAGGGTGATGTGAAAGCAAAGGAAATGACGCTGTGTGGGCTTTTC Gene GeneID:574091|LOC574091:NM_001025347:137_cdna Constitutive 0 NULL GeneID:574091 23 GENE LOC574091 NULL nucleoside-diphosphate kinase NBR-A EMBV3_06117 AGGTGAAATAATAACCTTGCCTTAGTGATCATGGTTACACAAAAGAGCTGCACTGCCAAC Gene GeneID:539986|BTBD11:XM_002687669:43_cdna Constitutive 0 NULL GeneID:539986 5 GENE BTBD11 NULL BTB (POZ) domain containing 11 EMBV3_29536 CCATCAAGGAGGTGCTCACCGACATATTTGCTAAGGTGCTGGAGAAGGGATGGGTGGACA Gene BVV0102_073151 + 0 NULL GK000019.2:40984002-40995431 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00096901 TCONS_00096902 TCONS_00096907 TCONS_00096903 TCONS_00096906 TCONS_00096904 TCONS_00096911 TCONS_00096908 TCONS_00096905 TCONS_00096910 TCONS_00096909 1 XLOC_058086 Coding TCONS_00096901 XLOC_058086 Coding Coding MED24 19:40985252-41009078 j TSS71911 3579 1 TCONS_00096901_5 962 26 0.85087093389297 0.00275012324584248 0.00181524536322811 0.00140201659854507 0.000728948463496784 0.000195300068758554 0.000674810891927322 0.000868032558628789 0.000552280815419012 0.00186922415870819 0.000170972579088647 4.87406384407533e-05 4.28458802029102e-05 9.25983172291686e-05 0.000420193306415759 1.68231126524709e-10 0.000161510207101885 1.12783510828348e-51 2.53870907514478e-09 0.0024610054405665 0.000706311966031111 0.000919671878053387 1.0381916060614e-07 5.61938101400739e-11 5.86997561504463e-11 9.46224763267161e-61 0.00118495437825102 1.74120580834606e-50 1.30725957781004e-14 4.54006216666216e-08 5.16626800009865e-29 XM_005220775.1 MED24 PREDICTED: Bos taurus mediator complex subunit 24 (MED24), 0.0 4500 99.96 0.697680916457111 XM_005257870.1 MED24 PREDICTED: Homo sapiens mediator complex subunit 24 (MED24), 0.0 3101 89.68 0.647108130762783 TCONS_00096901_5 sp|O75448|MED24_HUMAN MED24_HUMAN Mediator of RNA polymerase II transcription subunit 24; 0.0 1863 93.73 0.998960498960499 1 coding 0 0 0 0 -0.0653644459305561 0.532358916500297 -0.0074982819453322 0.920139138964708 GGGGAGGGTGGAGGAAGTGGGGGGAGAAATTTGGATTTGGGGTAGTAGTGGCTGAGGGACGCAGCCAGAGCTAAGGGCATATTTAGGCAACCGGAACTGGCTTAACCCCTTACTGCCCATTTATTCTTTGTATTAAGCACCTTTGACACTCTTCTTACTGCGCTTGTTTAAAGAAGAATGGTTCAGCTTGATTTCTCCAACCTCAAGGCTGACTGCTACCGGCCCGGTCTCCTCAGAGTGAAATCATGAAGGTGGTGAACCTGAAGCAAGCCATTTTGCAAGCTTGGAAGGAGCGATGGAGTGACTACCAGTGGGCAGTCAACATGAAGAAATTCTTTCCCAAAGGAGCCACCTGGGACATTCTCAACCTAGCAGAAGCACTACTGGAGCAGGCCATGATTGGACCTTCCCCCAATCCTCTCATCCTGTCTTACCTGAAGTATGCCATTAGTTCCCAGATGGTGTCCTACTCCTCCGTTCTCACAGCTATCAGCAAGTTCGATGACTTTTCCCGGGACCTGTGTGTCCAGGCTTTGTTGGATATCATGGACATGTTTTGTGACCGACTGAGCTGTCACGGCAAAGCGGAGGAGTGCATCGGGCTGTGTCGGGCCCTGCTCAGCGCCCTCCACTGGCTGCTGCGCTGTACTGCAGCCTCTGCAGAGCGGCTCCGGGAGGGGCTGGAGGCTGGCACCCCAGCAGCCGGAGAGAAGCAGCTTGCTATGTGCCTGCAACGCTTGGAGAAGACTCTCAGCAGCACCAAGAACCGGGCCCTGCTCCATATCGCCAAACTGGAGGAGGCCTCCTCCTGGACAGCCATCGAGCATTGTCTTTTGAAGCTTGGAGAGATCCTGGCCAATCTCAGCAACCACCAGCTCCGGAGCCAGGCTGAGCAGTGTGGCACGCTCATTAGGAGCATCCCCACCATGCTGTCCGTGCACTCTGAGCAGCTGCACAAGACTGGCTTCCCCACAGTCCATGCGGTGGTCCTGCTCGAGGGCACCATGAACTTGACCGGCGAGACGCAGCCCCTGGTGGAGCAGCTGATGATGGTGAAACGCATGCAGCATATCCCTACCCCGCTCTTCGTTCTGGAGATCTGGAAAGCCTGCTTTGTGGGGCTCATCGAGTCTCCTGAGGGCACAGGGGAGCTCAAGTGGACAGCTTTCACCTTCCTCAAGATTCCACAGGTTTTGGTGAAGTTGAAGAAATACTCCCATGGGGACAAGGACTTCACTGAGGATGTCAATACAGCTTTCGAGTTCCTGCTGAAGCTCACACCGTTGCTGGACAAAGCCGACCAGCGCTGCAACTGTGACTGTACAAATTTCCTACTGCAAGAATGTAGCAAGCAGGGCCTTCTGTCTGAGGCCAGTATGAACAACCTCATGGCCAAGCGCAAAGCAGATCGGGAGCACGCCCCTCAGCTGAAGTCAGATGAAAATGCCAACATCCAGCCCAACCCCGGGCTGATCCTCCGCGCGGAGCCCACAGTCACCAACATCCTGAAAACGATGGATGCAGACCACTCCAAGTCCCCGGAGGGGCTGCTGGGTGTCCTGGGCCACATGCTGTCTGGGAAGAGCCTGGACTTGCTGCTGGCTGCTGCCGCTGCCACTGGAAAGCTGAAGTCTTTCGCCCGGAAATTCATCAATTTGAACGAATTCACGACACACCGCAGCGAAGAGAGCACCAAGGCGGCCTCGGTTCGAGCCTTGCTCTTTGACATCTCCTTCCTCATGCTGTGCCACGTGGCCCAAACCTATGGCTCAGAGGTGATCCTGTCCGAGTCGAATACAGGAGGGGAGGTGTTCTTCTTTGAGACCTGGATGCAGACATGCATGCCCGAGGAGGGCAAAATCCTGAACCCCGATCACCCTTGCTTCCGGCCCGACTCCACCAAAGTGGAGTCCCTGGTGGCTCTGCTCAACAACTCCTCAGAGATAAAGCTCGTGCAGATGAAGTGGCACGAAGCCTGTCTCAACATTTCAGCGGCCATCCTGGAAATCCTCAACGCCTGGGAGAATGGGGTGCTGGCCTTTGAGTCCATCCAGAAAATCACAGATAATATCAAGGGGAAGGTATGCAGTCTGGCCGTGTGCGCTGTGGCTTGGCTCGTGGCCCACGTGCGGATGCTGGGACTGGACGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCGCTGTACAGCGAGAACACCCTGCAGTTCTACAATGAGAGGGTGGTGATCATGAGCTCCATCCTGGAGCACATGTGTGCGGACGTGCTGCAGCAGACCGCCACGCAGATTAAGTTCCCGTCCACGGGCATGGACACCATGCCCTACTGGAACCTGCTGCCCCCCAAGCGGCCCATCAAGGAGGTGCTCACCGACATATTTGCTAAGGTGCTGGAGAAGGGATGGGTGGACAGCCGCTCCATCCACATCTTTGACACCCTGCTGCACATGGGTGGCGTCTACTGGTTCTGCAACAACCTGATTAAGCAGGCGACCCTGGTCCTGCTGGGCCACATCCTGCCAGGCCTGCTCACTGACTCTTCCAAGTGGCACAGCCTCATGGACCCCCCGGGCACCGCTCTCGCCAAGCTGGCCGTCTGGTGTGCCCTGAGTTCGTACTCCTCCCACAAGGGGCAGGCATCCTCCCGCCAAAAGAAGAGACATCGGGAAGACATTGAGGATTACATCAGCCTCTTCCCCTTGGACGACATGCAGCCCTCGAAGCTGATGCGCCTGCTGAGCTCCAATGAGGAAGATGCAAATATCCTTTCGAGTCCCACCGACCGGTCCATGAGCAGCTCCCTGTCGGCCTCCCAGCTCCACACAGTCAACATGAGAGATCCACTGAACCGAGTTCTGGCCAACCTGTTCCTGCTCATTTCCTCCATCCTGGGCTCTCGGACCGCCGGCCCCCACACACAGTTCGTGCAGTGGTTCATGGAAGAGTGTGTGGACTGCCTGGAGCAGGGCAGCCGAGGCAGCATCCTGCAGTTCATGCCCTTCACCACCGTATCGGAACTGGTGAAGGTGTCGGCCATGTCCAGCCCCAAGGTAGTTCTGGCCATCACGGACCTCAGCCTGCCCTTGGGCCGCCAGGTGGCCGCCAAAGCCATCGCCGCCCTCTGAGGGGCTTGGCGTGGCCACGGGGGCTGGCAGGAGGGTTCCAGCCCTGTGCGCCTCGGAAGGGAACGTGCAGAACGATGAGCCATCGTTGCTCACATGCACATGACGTAACCTCCCCTGGTCAGTTTCCAGATCTTTTCCCTGCTCCTGACTTCTGACCTCTAAGACGGCTCCCAGTTTCTTTCATAATTTCCTGTCCCCACTGCCAGTACCTTCTGTGCATGAGCAGCCTGCTTCCTTCACTCAGAGCAGGCTCGCTTCAACACCCCCCACCTCACCCCCACCCGCCTGCTTGTCGCCTTCCAAGAGTGGATTTGCCTCCGAGGAGCTTTACGGGTGTGGGGGTGTGTGTGTGTGTGTATATATATGTATATATATTTTATTACATGAGGTGTGTTTGCCTTTTCTCAGTTGTAAATAAAGGCTTCATGGATCCCTTTATAGCCAT EMBV3_21047 GCCTTCCATAGCGAATAGAGAAGGTGATGAGCTGGGTGGCCAAAGTTAAGCTCTGTCTTC Gene GeneID:505628|SNF8:NM_001075211:59_cdna UTR3_Alt 4 NULL GeneID:505628 19 GENE SNF8 MGC142498 SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) EMBV3_37785 AAGACCATGCAGCTTCTCTTCCGTGGGGCCCAGGCCTGCATGGACCCTGCATGGGAGGAA Gene GeneID:617931|SIVA1:XM_002696850:694_cdna Constitutive 0 NULL GeneID:617931 21 GENE SIVA1 NULL SIVA1, apoptosis-inducing factor EMBV3_06925 TCCGATCTGCCACTGGGCCTGCATTTTGGCCCCTACGAAGGTCAGATCATATACAATGAA Gene GeneID:516002|LOC516002:XM_002683878:2_cdna Constitutive 0 NULL GeneID:516002 X GENE LOC516002 NULL similar to PR domain containing 9 EMBV3_42443 GGCCACCCGTTTGTGGAAGAGCTTCAGAAATCAGGAGGCAAGAGCAGCTCCGCACTGCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_36716 CTAACGCCTGTGCCGGGCACCACAGTCATTTCTAAAACTATTTTGGTACTTGCTCCTGGG Gene GeneID:781865|LLGL1:NM_001080342:120_cdna Constitutive 0 NULL GeneID:781865 19 GENE LLGL1 MGC142757 lethal giant larvae homolog 1 (Drosophila) EMBV3_20658 ATCAACGGTGAATGAAGAATGGCTGGAAGGGGAGTGCAAAGGGAAGGTTGGCATTTTCCC Gene GeneID:281346|NCF2:NM_174120:11_cdna Constitutive 0 NULL GeneID:281346 16 GENE NCF2 MGC179493 neutrophil cytosolic factor 2 EMBV3_22255 GACCACGCTGGACGCCATGATCATGGACGGCACTACCATGAACGTGGGAGCAGTCGGAGA Variant GeneID:511345|AGA:NM_001075511:11_cdna 296^335 1 EMBV3_34168 GeneID:511345 27 GENE AGA NULL aspartylglucosaminidase EMBV3_19723 AATTTCTGGCTTTGAAGATGGGAGGAAGGGACCAGGTACCAAGGAATGCCTACTGCCTCT Gene BVV0102_112498 + 1 EMBV3_19377 GK000030.2:166032-323756 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33963 GCTCATACAAAGTTTTACCTCAAAAACAGCAGGGACTGGTCACCTTCCCACAGCGTCCAC Gene GeneID:100335468|LOC100335468:XM_002685139:116_cdna Constitutive 0 NULL GeneID:100335468 1 GENE LOC100335468 NULL hypothetical protein LOC100335468 EMBV3_06159 CTTGTGTTCTAGATCTTACTGTCTTCCCTGGAATTCTCTGAGACACCACAGCATCATGGC Gene BVT0102_312334 + 0 NULL GK000018.2:49389663-49393724 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_00894 CACCTTCCCCGTGGAGCTCAAATCCTTCCAGACTACTCTCTCCATTTGCTGCCAACATGT Gene BVV0102_047623 - 1 EMBV3_43682 GK000006.2:27080768-27206778 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07829 GGTATAATGAATCGCTTAAGTGTGAACGTTTAAAGGCCCAGAAGATCAGAAGGCGTCCGG Gene GeneID:519644|CACNA2D3:XM_002697006:401_cdna Constitutive 0 NULL GeneID:519644 22 GENE CACNA2D3 NULL calcium channel, voltage-dependent, alpha 2/delta subunit 3 EMBV3_04717 GGTTCGGCCGGGGGCTGAAGGCCGCAGTCGACGAAGCCCGGGAGGAGTTCCTGGACCTGC Variant GeneID:510934|C18H16orf57:NM_001075477:192_cdna 153^319 1 EMBV3_29551 GeneID:510934 18 GENE C18H16orf57 C16orf57 MGC152256 chromosome 16 open reading frame 57 ortholog EMBV3_18307 TTGCTGCACAACAGCATTTCGTCCATTGGTGCTTAATCAATGACTTCACCAAGCCACAGG Gene BVV0102_107087 + 0 NULL GK000009.2:76118895-76365123 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00241786 1 XLOC_148450 Coding TCONS_00241786 XLOC_148450 Coding Coding - 9:76153646-76154099 - TSS181464 453 1 TCONS_00241786_1 115 1 0 0.000510588311726512 0.000295759051859655 0.00166490270931519 0.000320800408429697 0.000179831125733372 1.57927677530523e-05 0.000457010151657846 0.000398231622137783 0.000217719205742234 0 2.52669646612316e-06 0 5.38388198263274e-05 0 2.16609150455704e-05 0.00893991898674213 0.011709555010563 0.00591733810149061 0.00141677343320845 0.000746131664368162 0.000211094113066636 0.0059654657253036 0.00479967694172456 0.00729058638663645 0.00115474685345959 0.00165638522969241 0.000368621512591211 0.000116619357222568 0.000176823161418442 0.000484429956694383 XM_005215018.1 LOC101905432 PREDICTED: Bos taurus deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like (LOC101905432), mRNA. 5e-171 603 97.21 0.790286975717439 NM_015474.3 SAMHD1 Homo sapiens SAM domain and HD domain 1 (SAMHD1), mRNA. 1e-90 336 79.48 0.847682119205298 TCONS_00241786_1 sp|Q9Y3Z3|SAMH1_HUMAN SAMH1_HUMAN SAM domain and HD domain-containing protein 1; 3e-47 162 60.66 0.991304347826087 0 coding AAACTATGAACACCTTCCGAATGAGGTCGCCAGTGCTAAACCCAGTGATGTAGAGCTAGAAGCTGAACTGAAGGCTAAAGATTTGATAGTGGATGTTATCAACATGGATTATGGGATGAAAGACAAGAATTCTATTGATCATGTTTGCTTCTATTGTAAGAGTGACCTCAGCAAGGCAGTCATGATTACTAGAAACCAGGTTTCTCAGTTTTTGCCAGAGAGATTTGCTGAGCAGCTGATTCGAGTTTACTGTAAGAAGACAGATGAAAAGACTCTGTTTGCTGCACGACAGCATTTCGTCCATTGGTGCTTAATCAATGACTTCACCAAGCCACAGGATGGTGACATTGTAGCCCCGCTTATAACACCTTGGAAATTGGAGTGGAATTCAGCTGGCACCCAGGAAGCGGCCAAAGTCAAAGCCCAGTTTTTCCCAAGTGACTCAATGTGAAT TCONS_00237769 . 5' 34753 TCONS_00237769 . 5' 34753 EMBV3_35593 CTTCATGCCACGTTACCTCCTGGTAAACATTTCTGCCTTTGCTTGTGTGTGTTCTGGGGG Gene GeneID:540879|C1H21ORF7:XM_002684601:53_cdna Constitutive 0 NULL GeneID:540879 1 GENE C1H21ORF7 NULL chromosome 21 open reading frame 7 ortholog EMBV3_27808 CCTTCTGACTACGTCTATGAGAAAGACATGAAAAACGACCCTCTGAGTTCCACAGGCCCC Gene GeneID:540363|LOC540363:XR_084601:599_cdna Constitutive 0 NULL GeneID:540363 17 PSEUDO LOC540363 NULL similar to transmembrane protein 132B EMBV3_12496 ATGCACAGCCTCTTCCTTTATCAACAGCCTCCCCCAGAGTGGTGCATCTGTTACAACTGA Gene BVV0102_329869 - 1 EMBV3_11473 GK000004.2:89162120-89213078 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_06798 GTGGCAGAGTCTTCAGTTTTAATTCATATCTTGCAAGGCACCGAAGGACTCATACTGGCG Gene GeneID:531059|ZNF415:XM_002695317:5_cdna Constitutive 1 NULL GeneID:531059 18 GENE ZNF415 NULL zinc finger protein 415 EMBV3_04180 TGCATCTGAATCATCCGGGGTGCTTGTTAAAATATGGATACCTGGATCTGAGTGGGACTG Gene BVT0102_383948 + 0 NULL GK000030.2:62544033-62744342 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07361 CTGAGTAGGCCAGAGATCCAATCTGTACAGGAACCCGTCTCTGAAGCAGCAGCTCTTCTC Variant GeneID:338053|ATP5G1:NM_176649:38_cdna 158^336 2 EMBV3_23189 GeneID:338053 19 GENE ATP5G1 NULL ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) EMBV3_25672 GCCTGTGGACATCCAGACCCTTCCAGAAAGGATTATATATTGACCCTGAAGTCTTAGGAA Gene GeneID:512877|CENPI:NM_001102494:11_cdna UTR3_Alt 2 NULL GeneID:512877 X GENE CENPI LRPR1 MGC157083 centromere protein I EMBV3_26591 CAACATTCTGGAACGGGTCAAGGCTGAGGGGCTTTTAGACGTATTCCAAGCTGTGAAGAG Gene GeneID:505285|PTPRE:XM_002698569:98_cdna UTR3_Alt 2 NULL GeneID:505285 26 GENE PTPRE NULL protein tyrosine phosphatase, receptor type, E EMBV3_22986 CGTTCAGAGGTCTAAGCGTCACTGATCCATTGGGTGGATAGCCAACTGTGACAAAGAAGA Gene GeneID:540329|PPM1K:NM_001046474:195_cdna UTR3_Alt 2 NULL GeneID:540329 6 GENE PPM1K MGC137505 protein phosphatase 1K (PP2C domain containing) EMBV3_14648 TGGGCCATTTCCTCCACAGGCTCTGCTGGCTCTTCTGCGTGTTTTAGACTTCATTTACCA Gene GeneID:522946|ILDR2:NM_001102073:26_cdna UTR3_Alt 2 NULL GeneID:522946 3 GENE ILDR2 C3H1ORF32 MGC148927 immunoglobulin-like domain containing receptor 2 EMBV3_29081 CCACTTTCTGCCATTGGATCAAGGGAGCTAGGGACAAGAATGTGATGAATTGCCCCTCAG Gene BVV0102_364946 + 1 EMBV3_14432 GK000011.2:45640371-45653185 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38780 TGGGGTCTAGGAGCAACGAGATGCTGACCAACTCCAATAGCCCAGGGAGACTGACCCTTC Gene BVV0102_155085 + 0 NULL GK000016.2:1069428-1249450 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05666 CACCTAATCAAAATCTATCAGAAGCAAAATCTTCCTGATAAATCTATAGCAAGTCTGGTG Variant GeneID:506525|RCOR1:XM_002696778:475_cdna 266^480 2 EMBV3_12004 GeneID:506525 21 GENE RCOR1 NULL REST corepressor 1 EMBV3_06463 TTAGAGAAAGAATATGGCGAAGCGAGTACGATTCCCTGCTGCCCGATGTGTATGAGTGGC Gene GeneID:507817|ME2:NM_001076814:65_cdna Constitutive 0 NULL GeneID:507817 24 GENE ME2 MGC143100 malic enzyme 2, NAD(+)-dependent, mitochondrial EMBV3_19683 TCTGCATATTGGGCGACTGGGATCCATTTCCCTCCTAAGCTAGAAGCCCAGAAGTGGAGA Gene GeneID:539134|DMRTC2:NM_001038182:352_cdna Constitutive 0 NULL GeneID:539134 18 GENE DMRTC2 Dmrt7 MGC133756 DMRT-like family C2 EMBV3_14610 ATTCTGCACCTGTTGCCGGGGTTCACTCTCTGGTCAGGGAACTATGCAAAATCCCACAAG Gene BVV0102_217324 - 1 EMBV3_30520 GK000019.2:10395907-10410437 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_17164 GGAAAGCATCAGAGAATTCACACGGGAGAGAAACCTTACAAATGTCATGAGTGTGGGGAG Gene GeneID:788599|LOC788599:XM_002695316:2_cdna Constitutive 1 NULL GeneID:788599 18 GENE LOC788599 NULL similar to zinc finger protein 665 EMBV3_11756 GTGCCTTCTTCGCAGACATCCCCGTGCCCCGGCCGCCTATCTGCCTCAGCCTCCCTCTTT Gene GeneID:539328|EXOC3L2:XM_002695093:537_cdna Constitutive 0 NULL GeneID:539328 18 GENE EXOC3L2 NULL exocyst complex component 3-like 2 EMBV3_05409 AAGCAGGAAAATCCCAATATGCGGCTGTCGCAGCTGAAGCAGATGCTCAAAAAGGAGTGG Gene GeneID:510778|CCDC124:NM_001038523:53_cdna Constitutive 2 NULL GeneID:510778 7 GENE CCDC124 MGC133908 coiled-coil domain containing 124 EMBV3_17811 AAAGGCCAGTAACGGATCCCCAGCCCTCAATTCCTACTCTGCTTTGGGATAGTGTGAGCT Gene GeneID:517446|AP2M1:NM_001034523:31_cdna Constitutive 1 NULL GeneID:517446 1 GENE AP2M1 MGC128246 adaptor-related protein complex 2, mu 1 subunit EMBV3_03319 ATTTCCTAGGCAGGTTGATAGGGAGTCTAGGGGTCCCCAAAGAGAGAGGGGTCTGGAATT Gene BVV0101_020594 + 0 NULL GK000016.2:34983203-35207144 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00166913 TCONS_00253739 TCONS_00036105 TCONS_00129710 TCONS_00118490 TCONS_00012285 TCONS_00250599 TCONS_00040981 TCONS_00061482 TCONS_00165977 TCONS_00219592 TCONS_00125637 TCONS_00118456 TCONS_00040258 TCONS_00111186 TCONS_00145751 TCONS_00250203 TCONS_00133817 TCONS_00233473 TCONS_00246739 TCONS_00087729 TCONS_00174808 TCONS_00211020 TCONS_00196823 TCONS_00118491 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251851 TCONS_00251720 TCONS_00132067 TCONS_00061491 TCONS_00173459 TCONS_00145750 TCONS_00072261 TCONS_00055707 TCONS_00174805 TCONS_00023655 TCONS_00061483 TCONS_00204211 TCONS_00171428 TCONS_00207933 TCONS_00174806 TCONS_00188145 TCONS_00059695 TCONS_00161822 TCONS_00238985 TCONS_00038737 TCONS_00188520 TCONS_00118487 TCONS_00232824 TCONS_00089291 TCONS_00002600 TCONS_00036106 TCONS_00199364 TCONS_00207485 TCONS_00229794 TCONS_00031759 TCONS_00099018 TCONS_00209974 TCONS_00000529 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00103962 TCONS_00251625 TCONS_00246740 TCONS_00220566 TCONS_00118459 TCONS_00061487 TCONS_00118040 TCONS_00061484 TCONS_00056144 TCONS_00210913 TCONS_00239997 TCONS_00204210 TCONS_00019195 TCONS_00010963 TCONS_00252081 TCONS_00061481 TCONS_00124524 TCONS_00216950 TCONS_00166910 TCONS_00061490 TCONS_00241019 TCONS_00110425 TCONS_00123823 TCONS_00001867 TCONS_00174809 TCONS_00061485 TCONS_00090382 TCONS_00162767 TCONS_00125353 TCONS_00018601 TCONS_00132066 TCONS_00022895 TCONS_00107436 TCONS_00118488 TCONS_00198905 TCONS_00078426 TCONS_00087730 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00010280 TCONS_00205125 TCONS_00004603 TCONS_00061496 TCONS_00061489 TCONS_00061492 TCONS_00228562 TCONS_00056149 TCONS_00221350 TCONS_00125692 TCONS_00118489 TCONS_00061488 TCONS_00175330 TCONS_00173458 TCONS_00001866 TCONS_00061495 TCONS_00218901 TCONS_00009619 TCONS_00007850 TCONS_00061486 TCONS_00001865 92 XLOC_105290 XLOC_072622 XLOC_101749 XLOC_156678 XLOC_021081 XLOC_078423 XLOC_072644 XLOC_007831 XLOC_153542 XLOC_024793 XLOC_036985 XLOC_100817 XLOC_132911 XLOC_077179 XLOC_024074 XLOC_067086 XLOC_088920 XLOC_153146 XLOC_081223 XLOC_142955 XLOC_151107 XLOC_052579 XLOC_104695 XLOC_129530 XLOC_118488 XLOC_142312 XLOC_069472 XLOC_154792 XLOC_154661 XLOC_080699 XLOC_104361 XLOC_044030 XLOC_033515 XLOC_014322 XLOC_124371 XLOC_103815 XLOC_126448 XLOC_114188 XLOC_036486 XLOC_098707 XLOC_145651 XLOC_022558 XLOC_114563 XLOC_142307 XLOC_054076 XLOC_000643 XLOC_121017 XLOC_126001 XLOC_139288 XLOC_018004 XLOC_059261 XLOC_128485 XLOC_000141 XLOC_120473 XLOC_103679 XLOC_062257 XLOC_154566 XLOC_133883 XLOC_072206 XLOC_033947 XLOC_129423 XLOC_146662 XLOC_009875 XLOC_006514 XLOC_155022 XLOC_076070 XLOC_131385 XLOC_101746 XLOC_147683 XLOC_066329 XLOC_075375 XLOC_000454 XLOC_055163 XLOC_099648 XLOC_076895 XLOC_009288 XLOC_013565 XLOC_063346 XLOC_120558 XLOC_047314 XLOC_148229 XLOC_005831 XLOC_124587 XLOC_001070 XLOC_138526 XLOC_033952 XLOC_134666 XLOC_077234 XLOC_105112 XLOC_132220 XLOC_005172 XLOC_003410 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_31976 CGACAAGAAGAGGAGGCCCCTCACCCTGGCCTCTGGACCTGTGTTCCTCTGTGGCCAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09955 ACGTCCTTACCGCCTTTGACCTGTGGGAACAGGCTGAGGTCCTTACCAGGAAGAACAAAG Gene GeneID:781149|AFF1:XM_002688397:56_cdna UTR3_Alt 2 NULL GeneID:781149 6 GENE AFF1 NULL AF4/FMR2 family, member 1 EMBV3_07754 CCTACCTGACTCCACATGTATCTTTCTTACAGCCTTGGTTGTACAGGAGTCTTTCTGCCG Gene BVT0102_122822 - 0 NULL GK000017.2:15274944-15685555 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21863 AATACAACTGGCAAACAGCTTTTTGACCAGTGTTTTGGAGCAACACAAGCTGACAAAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_32547 GCTCTGCTTTTCATTCTCTCCTGGTTGCCCCTGTGGACCCTGATGATGCTCTCAGATTAT Gene GeneID:530560|NPFFR2:XM_002688346:128_cdna Constitutive 0 NULL GeneID:530560 6 GENE NPFFR2 NULL neuropeptide FF receptor 2 EMBV3_07063 TGACCCGGATCCAGCTCCAACCTCTTATTAGACCAGAGGCTCTCTGCAGGTTGTGGGGTA Gene GeneID:511610|SURF6:NM_001075529:61_cdna Constitutive 0 NULL GeneID:511610 11 GENE SURF6 MGC139977 surfeit 6 EMBV3_09382 GCATGTATGTCAAAACCCAGAATCTGCACCGTCACTTCCTTAGTGTAAATCCGGCTTTGC Gene BVT0102_088158 + 1 EMBV3_14840 GK000022.2:43979583-44018731 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39197 TCCCAGAGCACTCAGTGTCCCCGCGCACGGAGGCCAGATTCTGGAGAAGCCTCTGACGAT Gene BVT0101_002530 - 1 EMBV3_35953 GK000023.2:52336133-52380454 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00162856 TCONS_00138399 2 XLOC_099737 XLOC_084607 NonCoding TCONS_00138399 XLOC_084607 NonCoding NonCoding - 23:52339722-52340265 - TSS103689 543 2 TCONS_00138399_2 72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.64206423304416e-06 0.00162863493574537 0 0 0 0 0 0 0 8.19963178007646e-05 0.00206120385136738 3.08741624332956e-05 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0477054151333904 0.704602172874859 0.0229371038869225 0.70749187775082 GGGTGGGATTTGGCTTTCTGGGTTGGTTGCTATAAGGCGTGGGCCTGTTTGGAGGGAGAGGACCAGCGGCTCCCAGGAAGGATTTAGAGAATTCTGAATCGTGGAACACGTCTTTCATGATCTTCAAATAGTGTGGACAAAGAAACTGTATTCAATGTTTTAAAAATTAACTGCAAAGTGATCACAGTGGGAACAAAGGCGATTTTCACTATTGTGAATTTTAGAATTTGGTTATATTGCTCTGTGACTTAATGAAAACTATTCACTCATTTTTATTATGCGAAACACCACCGTGCGGCCTTCTGATCGACCTCGCGCAACAGCCACCACACAACGCACCACTGTTTGCGCACCTCACCTGGGGGACCTGGGTCGCACACGGGCAAAGGTCCGCGGGAGCACCCAGCTTCAAGCACGGCCATTAGGCATCGCGTTGCCCGTCCCAGAGCACTCAGTGTCCCCGCGCACGGAGGCCAGATTCTGGAGAAGCCTCTGACGATCGGCCCCGCCAGGAGTTCAGTTGAGGTTCTCTTGACCGTCACT TCONS_00135520 . 3' 104211 TCONS_00135520 . 3' 104753 EMBV3_24542 AGCTTGATTCTTAAGGCCACCAATTTGCCACCAATAAAAAGCACACTGGTAGAGGCCGCC Gene BVT0102_161972 + 0 NULL GK000006.2:60496137-60544410 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00205234 TCONS_00205236 TCONS_00205239 TCONS_00205233 TCONS_00205237 TCONS_00205232 TCONS_00205238 TCONS_00205235 1 XLOC_124614 Coding TCONS_00205233 XLOC_124614 Coding Coding PDS5A 6:60531631-60592733 j TSS153313 5725 1 TCONS_00205233_3 952 25 0.906711837776796 0.000576488374715152 0.00332772557555141 0.00113220374959952 3.61108530773698e-18 5.04814158165263e-13 1.17884685366875e-09 0.000644676945613935 3.00788442381619e-11 0.00141368520150609 0.000498074240073299 0.00133513139967715 6.0352951299766e-06 0.000224614881498736 0.000368016452674189 0.000563668324072629 0.00566561914997247 0.00229568300295956 0.00420106436099353 0.0026290296390304 0.00296674649104664 0.00068485436384931 0.00162011424663925 0.00255339065585401 0.000970842400544851 0.00316625943936389 0.00223869988014416 0.00130862219508945 0.000303565853017908 9.3820701865629e-05 0.000164146521790258 XM_001787682.3 PDS5A PREDICTED: Bos taurus PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) (PDS5A), mRNA. 0.0 5207 98.98 0.509868995633188 NM_001100399.1 PDS5A Homo sapiens PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) (PDS5A), transcript variant 1, mRNA. 0.0 7157 89.32 0.94707423580786 TCONS_00205233_3 sp|Q29RF7|PDS5A_HUMAN PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A; 0.0 1896 93.61 0.998949579831933 0 coding 0 0 0 0 0.150566262634606 0.575365305819387 -0.0237449350890625 0.643894334404471 AGAATGATGTAACTGTCATTTTAATGACCACCGTATTTTCTAATTTAATGACATTCATGTTCCTGTGAGATTAGAAAGTGTGAAATTTGCCAGTCACTGTTTAATGAATCACCCAGATTTAGCAAAGGATCTCACAGGTTTCACTCTGGCACTGTTTCAGGTCTCTAACAGTCATGGACTATGGCGAGTAAGAAAAGAAGCTATGATGGGTCTGGCTCAGCTTTATAAGAAATACTGTCTTCATGGTGAAGCAGGAAAGGAAGCTGCAGAGAAAGTCAGCTGGATAAAGGACAAACTTTTGCATATATATTATCAAAATAGCATCGATGACAAACTATTGGTAGAGAAAATCTTTGCTCAATATCTTGTCCCCCACAACCTGGAAACAGAAGAGAGAATGAAATGCTTGTATTATTTATATGCTAGTTTGGATCCAAATGCTGTCAAAGCTCTCAATGAAATGTGGAAGTGTCAGAACATGCTTAGAAGTCATGTACGAGAACTGTTGGATTTGCACAAGCAGCCTACATCAGAAGCTAACTGTTCTGCTATGTTTGGAAAACTGATGACCATAGCAAAGAATTTGCCTGATCCTGGGAAAGCACAAGATTTTGTGAAGAAATTTAACCAAGTTCTTGGTGATGATGAGAAACTGCGATCTCAGTTGGAGTTGTTAATCAGTCCAACCTGTTCGTGCAAACAGGCAGATGTTTGTGTGAGAGAAATAGCCCGGAAACTTGCCAATCCTAAGCAGCCAACAAATCCTTTTCTAGAGATGGTCAAATTTCTGTTGGAAAGAATTGCACCTGTGCACATTGATTCAGAAGCCATCAGTGCACTGGTAAAACTGATGAATAAATCAATAGAAGGGACAGCAGATGACGAAGAGGAGGGTGTAAGTCCAGATACAGCTATTCGTTCAGGACTTGAACTTCTTAAGGTTCTGTCTTTCACACATCCTACCTCGTTCCACTCTGCAGAGACATATGAGTCCCTGTTGCAGTGCCTCAGAATGGAAGATGACAAGGTAGCAGAAGCCGCCATACAGATTTTTAGAAACACAGGCCACAAAATAGAAACAGACCTACCCCAGATACGGTCGACCTTAATTCCCATTTTACATCAGAAAGCAAAGAGAGGAACTCCACACCAAGCAAAACAGGCTGTTCACTGTATACATGCCATATTCACAAATAAAGAAGTCCAGCTTGCACAGATTTTTGAGCCACTCAGTAGGAGTCTGAATGCTGACGTACCAGAACAACTTATAACTCCGTTAGTTTCATTGGGCCACATTTCTATGTTAGCACCAGATCAGTTTGCTTCCCCAATGAAATCTGTAGTAGCAAATTTTATTGTTAAAGATCTACTAATGAATGACAGGTCAACAGGTGAGAAGAATGGAAAATTATGGTCTCCAGATGAAGAGGTTTCCCCTGAAGTACTAGCAAAGGTACAGGCAATTAAACTTCTGGTAAGATGGCTGTTGGGTATGAAAAACAACCAGTCTAAATCTGCCAATTCAACTCTTCGGTTATTATCAGCAATGTTGGTTAGTGAGGGTGACCTGACAGAGCAGAAGAGGATCAGTAAATCTGATATGTCTCGCTTGCGATTAGCTGCTGGTAGTGCCATAATGAAGCTTGCTCAGGAACCTTGTTACCATGAAATTATAACCCCAGAACAGTTTCAGCTCTGTGCACTTGTTATTAATGATGAGTGCTATCAAGTAAGGCAGATATTTGCTCAGAAGCTACACAAGGCACTTGTGAAGTTACTGCTCCCATTGGAGTATATGGCCATCTTTGCCTTGTGTGCCAAAGATCCTGTGAAGGAGAGAAGAGCACATGCACGACAGTGTTTACTAAAAAACATCAGTATACGCAGGGAGTACATTAAACAGAACCCCATGGCTACTGAGAAACTATTATCACTGTTGCCTGAGTATGTAGTTCCGTATATGATTCACCTGCTAGCTCATGATCCAGATTTTACAAGATCACAAGATGTTGATCAGCTTCGTGATATTAAAGAGTGCCTCTGGTTCATGCTTGAAGTTTTAATGACAAAAAATGAAAATAATAGCCATGCCTTTATGAAAAAGATGGCAGAGAATATCAAGCTAACAAAAGATGCCCAGTCTCCAGATGAATCCAAGACAAATGAAAAACTTTATACAGTGTGTGATGTGGCCCTGTGCGTGATAAATAGTAAAAGTGCTTTGTGCAATGCAGAGTCACCAAAGGATCCAGTCCTGCCAGTGAAATTTTTTACACAACCTGAAAAGGACTTCTGTAATGACAAGAGTTATATTTCAGAAGAGACAAGAGTACTTCTGTTAACAGGAAAGCCAAAACCTGCTGGAGTACTAGGTGCTGTAAACAAGCCTTTGTCAGCAACGGGAAGGAAACCATATGTTAGAAGCACTGGAGCTGAGACCGGAAGCAATATTAATGTAAATTCAGAGCTGAACCCTTCCACCGGAAATCGACCAAGGGAACAGAGTTCAGAGGCAGCAGAAACTGGTGTTAGTGAAAATGAGGAGAACCCTGTAAGAATTATTTCTGTCACACCAGTAAAGAATATTGACCCAGTAAAGAATAAGGAAATTAATTCTGATCAGTCTGCCCAGGGCAACATCAGCAGTGACCGAGGAAAGAAAAGAACAGTAACAGCAGCTGGTGCAGAGAATATCCAACAAAAAACAGATGAGAAAGCAGATGAATCAGGACCACCTGCCCCTTCAAAACCCAGGAGAGGACGTCGACCCAAATCTGAATCTCAGGGCAATGCAACCAAAAATGATGATATAAATAAACCTCTTAGTAAGGGAAGAAAGAGAGCTGCAGTCAGTCAGGAGAGCCCTGGAGGTCTGGAAGCAGGTAATGCCAAAGCACCCAAACTGCAAGACACAGCCAAAAAGGCAGCACCGACAGAGAGACAGATTGACTTGCAAAGGTAAAAAGAGAAATTTATTTGCAAAGGGAGAAAATGAAGGCCAAACAGAAGCAGGCTCTAGCTTCTGCAAAAACTTGGATTCAGAATGATGTTGAACAGACAATGAAGCTAACTTCAGAACACACTTTCTGCCTTGAAAACTGAAAAAAGCTATTACTTCCTTTTTTCACATGACCACAACTCCTTTGATGGAAATGTACAGCAGAAACTCTTGAGAGAGAGGCTAAAAGCAACTCTTTTCCACCCTCCCCCCAGACTTTTCTTATGAAAAGTCAATAATTAAGCAAATTGCTTAACACTTGGTTCCAGTTCCTGCATATCTGGAGTTTAACGGCATAATACACCATTAATTTCCATGCTGCAGTCTTTATTTTAAAGAAAGTAACAGGATGTCCTTACACTGACAATGAAAATTCATCAATTTTAGAGCCAGGAATTTCCCGTGTTACACAAGAAAAAATAGAAGTCTACTGAATTAATTTTTTAGAAGAAGAGAAATCAGATTAAATGTCTTTTTTTTTTCCTTTTGGAAACTTTTATGTATAATTCTTTCTGCCTGCCTACTTTTCTGCAAAATGAGATGTACAGATTTCAGTTCCCTGCTATGAAAAGTGATGTGGTGGCAATTTTATAAATGTTGCTTTCTGATTTTTATCAGAGTGAGAAAATAATTAAAATTATTATTGATTTCATATCACTTCATATTTTGATTTCCCCTCCATTTTAGTTTAATATAATTTGCAATAAATGTACATATTGTTGTCTGTTTCATAAAGCATATCACTTTAAAGTGGTTTTTACTCCTGTGATTATGTTGGAATATTTGAAATTTTAAAGGAGTAAAAACTGTCCAGCATTTGGTTTTATAATGTTTGTCACCAGATTTTTATTATTGATGTAAAAAAAAGTCAATTCTTTTTAAATAGTTGGACTTTGGCAGCTTTGTAAGGAAAGTGGGAGGTGCTTAGGATTGCTATCAATTTCAGCATTGTGCTGTTGGGAATAAGTGTTTTGCTTTTGTCTGCCAGTCTGGGCTCCGTTTTTATGTTTTTTTTGAAGACAACTATTGCATCAATATATTGTTTCTTGGCATTGTTCAGCATAGGTAATGTGTGCACTTTTCGTGTACACATATTCATATTTAAGTTTTTTGCATAAAATAAATGCTTCTAGATGTCATATGGTAGTCTTTTTTAATCTTTTTATCACATTATGTTTTCCTGTGCAGTTTTTATGTGAAAGGGCTAAAGTTATAAAGAAACAACATGATTACAGTCAACTCTCCATTATCTATACAAAACAGTGACTATGCCTCAGGTTTTGGATTTTGCATAAAATCACGTAATTAATCATAAAATTAAAGTAACAAAGCATACCGTAAGAGCTAATTCAGGAGGAACTCGAGATTGGTCCTTTCTCACCTGCCCCCACTCTCCACTTAAGCCCTTTCCCCAAAGCCCCATCTGAATGTGCTCAGTGTCCTTGCGCACACCTGGCGTGGGTTTGAGGACATAAATGTTTGTGTGATAACTTGGTCTTGACAGGCTGTAAGTCTACGTGAGATGTAAAGAGTGAACATGACCTGTGTCCAAAAAGGATGATAATGTTAAATGTAAAATTTGTTGGTAGTAAATGTCACTTAATGTTCTCATAGGTAATCAAGAGTTGGCTGTATACTGACTGACTGAAAGATGGATAATTCTCTTAAATATGCATATACACACATTTAGGTATTGGATGATGGCTAGGGAACAATGGATACCAGATATTACCTTTTAAAAGGGCAGAAAAAGTTCTACTCTTCCTTATTGCCTCTTCATAATCCTTTAGAAAGATAAGATATTGCCTCCAACATGCTGAAAAAGAATATCTATGCATAAGCATCAGAGAAGTCCCTCAAGCCATCAGTGGGCATGTTCTGTTTAGATGTTGAAGTTCTCTTAGCATCAGACAGCTTGATTCTTAAGGCCACCAATTTGCCACCAATAAAAAGCACACTGGTAGAGGCCGCCTCTCTCTCGTCTCCTTTTAACTGACCATTCAGCATCATAGCTGACTAGATTACCTAGCGTGAAGTCATAGCTAACGTAGTGTAGCAGCCATTCCCATCAGTTATGGCTGCTTAGATTTTTGCAAGAGAGAAGTTAGCTCAAAGGATCTGGTCCATATACAAAATGTAAATGGCCCACCTTGGATTTTTTTTAATACGAAGCAAGTGTCTGGCACTAAGGGATGGGAGAGTAGGACTGAGCTGATGGGGAGGGACTTAAGGGAAATTTGTCATTTTTCCTTTGAAAAAGGAAAAAGTAAAATCTCTTAGGAATTTGGTATTCACATCTCAGAGAAATACAACACAAAGTGCAGACTTATATTTGAGAATTAATGTTAACCCTTTGTGTCTAGTTTGAAGCTTCTTGTATTTGTCTAAAACTACAAGCCAGAATTTTGTATCTCCTTTGATAAAAAGTGTGTATAATGTAAAGTAGTTTTGCATATTCTTGTGCTGCACATGGGCTGAATTTTTAAAAAATTTTTTAAAAGACTTGAAGAGAACCTTGTAATTTGTGTAAATGACAAGTGTAAAATCCTACCATAAAATGCTAAAAATATGCATTGTTTCAAATAAAACCAAGAAATGCAGCATTATATAGTAGTGTGGAACCCTGAGTATTCATGTACCCTCTTGGTATGTCGCAAGCTGATAAAATGTCTTTGCATATTTTCTGTTTAGATTCTGGACTTCGCACATCCCCATAAGGAAACAAAG EMBV3_28986 GCTTCAGAACCACAAGGCCACAGTCTCCATCTCAGCTACCATCCATGTGCTGTCCTACTT Gene GeneID:522020|LOC522020:XM_002692295:1672_cdna Constitutive 0 NULL GeneID:522020 13 GENE LOC522020 NULL similar to long palate lung and nasal epithelium protein 3 EMBV3_18477 GCCCAGATGCCCACTGTTGAACGACTCTCTATGACAAGATATTTCTACCTCTTTCCTGGC Gene GeneID:338039|CASP4:NM_176638:5_cdna UTR3_Alt 2 NULL GeneID:338039 15 GENE CASP4 CASP13 MGC137679 caspase 4, apoptosis-related cysteine peptidase EMBV3_11588 CCCGCCCATTCCTCCTCCGGTTCCACCATTTCGAGCAAGAGATCGGTCTTCAACAGAAAA Gene GeneID:614391|SORBS2:NM_001079787:79_cdna UTR3_Alt 3 NULL GeneID:614391 27 GENE SORBS2 Argbp2 MGC157359 sorbin and SH3 domain containing 2 EMBV3_04344 CAACAAAACTGGCAATTTATGATTCATTGATGGGAGAGGTACAGTAGAAAGGCCCTGCAG Gene BVT0102_035093 + 0 NULL GK000030.2:70936560-71126271 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00244699 TCONS_00244700 TCONS_00244702 TCONS_00244694 TCONS_00244703 TCONS_00244696 TCONS_00247219 TCONS_00244697 TCONS_00244698 TCONS_00244695 TCONS_00244701 2 XLOC_150529 XLOC_151274 Coding TCONS_00244703 XLOC_150529 Coding Coding BRWD3 X:71070148-71096500 j TSS183853 6795 1 TCONS_00244703_5 433 10 0.742514515578157 0.000317766066465121 8.17893979489443e-13 7.91767765873539e-11 2.16024237384054e-07 3.53119970398316e-11 3.17778518869964e-08 1.3652108992644e-09 7.7002354323992e-46 2.37400086887044e-96 0.000107519889811187 0.000161273649261721 0.000237403309146952 6.89292361751847e-12 0.000132578664256291 5.32523482835511e-05 0.0013177761202565 1.19318587316209e-32 0.00136104262639615 5.55504131999584e-05 2.1259468494747e-15 6.07406843634251e-09 7.10794038414748e-19 5.42182354888173e-07 0.000638608846653517 4.23417619117706e-05 5.69187050960579e-08 4.77512432484757e-18 1.04723673026847e-17 0.00015270095275346 0.000191212099541449 XM_614337.7 BRWD3 PREDICTED: Bos taurus bromodomain and WD repeat domain containing 3 (BRWD3), transcript variant 3, mRNA. 0.0 1.109e+04 100.00 0.904635761589404 NM_153252.4 BRWD3 Homo sapiens bromodomain and WD repeat domain containing 3 (BRWD3), 0.0 6231 85.82 0.782487122884474 TCONS_00244703_5 sp|Q6RI45|BRWD3_HUMAN BRWD3_HUMAN Bromodomain and WD repeat-containing protein 3; 0.0 590 94.46 0.997690531177829 1 noncoding 0 0 0 0 0.0198168045252485 0.870457612342546 0.0374357138697686 0.426146510977408 CTAATTTTTCCAGCTAAGACTTTCAATACTATGTTAAATAAAATAAAAGAGATACAGAAATGGTTGATTTAGATTCAGATGGACCTGGTACTTCATCTGGAAGAAGGGTCAAATGCCGAGGCAGAAGACAGTCTTTAAGGTTTAATCCTGATGCTTGGAGAAAACAGTGCAAAGAACTATTGGGCCTCATTTATGAACGTGAAGACTCAGAGCCATTTCGACAACCATCTGATCCTCTTTCCTACCCAGGCCATCAAGAGCACGAGGGTGAATCCTCTGAGTCTGTTATTCCAGGACAACAACAAGATTCATCTCTTTGTGAGGGTGAAGGCTAAGACTCTTCCACAGAACCCTACTATTTCCCTGAGCCACCAAAAGACCTCTATTAAAAAGATGATTTGGGGGCTAGGAAGAGGATTATCATGATGTTATAGACACTCCTATGGACTTCAGCACTGTGAAAGAAACATTGGAAACAGGAAACTATGGTAGTCCTCTGGAATTTTATAAGGATGTTCGCCAAATATTCAGCAACTCCAAAGCTTACACCTCTAATAAAAAGTCACGGATCTATAGCATGACACTGCGATTGTCTGCCTTATTTGAAAGTCGTATTAAAAATATCATCTCTGAATATAAGTCAGCAATCCAGAGTCAGAAGAGGAGAAGGCCACGGTACAGAAAACGTCTAAGAAGCAGCAGCAGTTCATTATCTAGTAACAGAGCTCCTAGTCCAAAAGGGAAACAGAAGCAAATGAAGCTGCAGCCTAAAAATGACCAGAATACCTCAGTGTCTTATGCCAGGAATAGCACTCCTTTCTCATCTCCTGTTTCAGATGCTGCTGAAGGGCTTTCACTGTATTTACTTGATGATGAACCAGACGGGCCATTTTCTTCATCGAGCTTCAGTGGATATAACCGAAGTGGAAATAGCCATGACCCAGGGAAAGCCAAATCATTTCGAAATAGAGTTTTGCCAATTAAGCAAGATCACTCCATTGATGGACCCCTTACAAATGGTGATGGCAGAGAGCCCCGGACAGGAATCAAGAGAAGACTACTTAGTGCATCAGAAGAAGATGAAATCATGGGAAGAGAAGAGAAAGAAAAAAAAGAAACAAAAGAGAAATCACATTTATCCTCCTCAGAGAGTGGAGAGTTAGAATCCAGTTTAAGTTCTGAAAGTACCTGTGGTTCTGATTCTGACTCTGAATCAACTTCCAGAACAGATCAAGATTATGTAGATGGAGACCATGATTATAGCAAATTCATACAAACTAGGCCTAAAAGAAAACTCAGAAAGCAGTATGCCAATGGCAAAAGAAACTGGAAAACGAGAGGCACGGGAGGAAGGGGCAGATGGGGAAGATGGGGTAGATGGAGTAGAGGAGGCAGAGGAAGAGGAGGCAGGGGACGAGGCAGTCGAGGAAGAGGTGGAGGTGGTGGGAGAGGGAGAGGAAGAGGGAGAGGCGGAAGAGGTGCTTCTAGAGGAGCCACCAGAGCCAAACGTGCACGTATTACAGATGATGAATTTGATACTATGTTTTCAGGACGCTTCAGTAGACTGCCTCGAATTAAAACAAGAAACCAAGGCAGGAGGACTGTTTTATATAATGATGATTCTGATAATGACAATTTTGTGTCCACTGAAGATCCTCTGAATCTTGGTACATCCAGATCAGGCAGAGTGCGTAAAATGACAGAAAAAGCCAGGGTTAGCCATCTCATGGGATGGAATTATTAGCAGTTAATAAATTTAGAATAATTTAAAAAATTCAATGGCCTTCTACTGCAGGGAATTTACCAGGAAATCTACAAAGCAAGTTGTGTGGGGACTTCTGCTTCCTTTCACATTGGTGCTTTTCCATTATGCCAGTATACATTTATTTCAAGACTTTTGATCTCCACACTTCATTTGTTCAAACAAGCCTTACTCATTAGGCCTTAAATTTTAAAAAAAATTCTACACACACACACACACACAAACCACAGACACACTACAGATTTACTACATTAAGGGAGCATTCAGCTTCTTAAGAGTAGCATGACATTTTTATCTAAATGGAATATCCCTCTTTTGCTTTTGTATCACAGAAGTATAGCACCTTCTTACAGAGTTTTATATAGTTTGTTTTTGCCATTTTGATTCTTGTACCAGTAATAATAACTTTTGCACAATACACCAATCCTAAAGGCAGCTATTAAATGTTTACAGTTTCTATATTGTAAGAACGATCTGGATTATTTTACTCTTCCCAGGCCAAACTTTCATGAATTGTACTGAACTGAAGTATATATTTATACTACAGTTTTTTTTGGGGGGGTGGGGGGTTCTTAATATGCTTTTCATTGATTTGCTTAATTCATGTTAAAGGTAAGAAAGGGTTGGTGCCTTGTAAATATGTAGCAGATCTTTGTGGTGTGTCCTGATGTGTGCATTAACTTTATTAAAAAAGAATACTTGAGGTATCGATCTAGACAAGGTGCCAAATGCAAAAGTTTCTTGCATCCATTTTCTTTTTTCTGTTAAATTTTATTGCATTAATAGAACTTGTGTAGCTTAAAGAATAACTTAAACATTTGAAAAATCCTCATCCACAAAGAATAACTGAATAGTAGCTCAGCTACCTCTATTAACTACAACTACTGGAAACATTAAGAAAAATAGATGCTGTTATTCATTATAAGGAGAAACTAAGGAGAAATAGAACAAGCATGGTAGGAATGAATACTCATAAGTTATAAGCTGAGAGGTTGTTGATAATTGTATTGGCTCTCAAATGAATAGTTGTAATTAAATTTTCTCAAGTATCATAAGCTCTACCTTATTAGGCTTTTCTTAGAGCGTATTTGTGTAAGTAGACTTGATCTACTGCTTATATATCCCTGCTACCACTTGCTATTTAACAGCTGTGAGTGACTGGTATTGAATTTTAAAATGTAGCACAGCACCTAGTTTGAGTTGGAATGTTTTAGCTAGCTAATATTTTGAATCAATGTAGGTTCAGCTCATACCATTCCAAAGGGTTCTTCTGTTAATCTTTCAGAATAGAACCTGGTTGCACTGCACACTGATATTTTGAGTCATTATTTTATAGATTAAAAATAAACCCTATGGTCTTGTTTACAGCAGTAGAGTGCACATTGGTTCCATAAGTGAGCTTGAGTTCCAAGATCAATTTTACTCCTCAAATTTGAGGGGTTGCAAATTTGCTAATTCATTAGATAACCTAGATTTTTGAGGTAAGAATAATATTGATCTCTGTTTTTGTAACAACCAGTTTGCCCATAAATCAAACTTATGGAATAAAAGGAACTTCTTAATATATGCTTAGTAATCCCAGGATATTTCATAAGCTAATGTATTTGTCTCATGTTTTCATTCATTTCATGCATCTGAAAATCCTTAAGTGCAGAGGAAGGAGTACACACATAGCATTGCTTTTTTGGTTGGGTTGGGTAGAGGGTTTTCTTGGACTAACATCTTTAAACAATTTTCACTTGCAGTAGAAATGATGTTCAGGCTTTAAGAAAGTATTGCAAATTATTAATGGAACTAATTTATATTTCCTGACAGTAGATCAAGTTTATTTTTGGTTGTTGTAGTCTACTTTTCACTAAACCAAAATTACTTCTGGTTGTAACTCAGCTGCCACTTTTAACCCATAATATATATATTTAAAAACATTCATGTTTAAAACTCTACATTTGATTTTTGATAAAATGTACTATTTTAGTTATTCATATCTTGGACATTTAGACTAAATTTGTGCCTGTGTTTTCCTGGAATTGATAACACTTTGGCCTACCCTATTCAAAGTAACATAGTTACTTAAATTCATGGATATATCCAAATGTGTATCATGTATATCGTTGTAGTGTGAAATTTTTTTTTGACATTCTTCTATGAAGAGCTGACCTCTTGAAATGTAGAAGAATTGCCATTTGTGTGGTTTAGCTATCTCAAGCTTTATTTATAATTTATTTTGAAAAATAAAAATGGCACATTTATTTCCCAAATGTCAAGATTTTCTAGGTTTAGATAATTAGAATAAAAAGGGTGAAGACATTTTAAAGAATATTTTATATGTAGTGAGATACTGTGAAAATACTAGTGAACAGCATTTTGCTGTAATGTTGACTTCAGTTACTAGGATGTAAAGAGTTAGTCACCAGGGTATGTTAGATGAGCATAGTTTTCACTTACTACAAAACAGATAATTTTCTGTTTGCATGCAAATTATTTTAATAAGTGTAAAAATAAAAGTTTGGAAGACAGTGTTTTTACCTTTATATCTGGATTCCCACCCCCCAATTTATACTTTGCTTTTTTTTTTTTTTGTAATATCACCTCTTGTGAATGTGTTGTAATTTGTATTGCATTGATATTTTATCACTTTAATTTTTTAGAGGTTCTTTAAACCTAAATAAGATCTGGGTTTAGCCATAGCAAAGCAAGTAGGAAATGAGCTAAGAAATTTGAAAAAAAAAAAAAAAGTCTAAATTTTAAATGAATTTCTAAGAAAAAAGTTACATTTAGGTCCATGAGAGCATATACATGTACAAGCCTATTCCCGTTCTAGATATTAATAGTCAATGAATTGTAATGTTTCTCATGAATGCTAATAATGTTTAAATTCCCAGCTTTAAGATTCTAGCATGTGTATCTGTTTATGAAACAGATTGTGTTGCTTCTATGGCTTGCTGTGTGTATCTCTTCCAGCAACAGGATGCTCTCTAAAACATTCACTGGCCTCTTAGTGTAATGACTAAATTTGTGTGTGTGTGCGTGCACGCATGCACTCATGTGTGTGTGTGCACAGATCTATATGTAGATTTTTTTCCCTCAATTTAACATGTTTTATCTCAGACATTAAAAAAAAAAAAGTTTATATGGAAGACAGCTGTATTCACTGTCTACCAATTCATTGCTTCTGTTGTAAAGCACTTACCCAGTATATATACTGCTTGATTATCCATATCATTATGCCTTCTAGATAAACAATCTACGTTTTGTTGTGTACATATGCCCTATTTTTAAAATTTAATTTGCCCTTCTTTCATGTGTTTCTTTGTCCATTTCCTTTCCCAGAGATCAGGCTTGTGCTAGAATTCTTCCATACAGCACTTTGTTTCACCCAGAGGCTAGGAAACTGAGTAAAATTATTAAATCTTATTCTGCACAACTGTGTGCTCAGATATCTAACTCAGCCTTCTGATATTTTAAAGTAAATTTGAGTGATTTATCTTTGTCATTGCTTTTGTTGTAATCCTAGATTGTCATCAGATAATAACAGAATGATTGAAATAGAAAGATGTGTATGCCACTTCTAACTTTTGATAAAAACTTTTTGGAGAATTTTTCAAAATTTGTATCTTGTAGTGATAAAATTAAACATCTATTACTTGCTTATATATCTCGGGAATTATTTTATGCACATTTATCAACTGGTACTTAGGTTTAAAGTTGGCATTTTCTTTTTAAGTTGGAATTTTCACATCCACAGAAGGGAGACTTAACTACATAATTTTCAGTATACTTTGATATCCTGCCTTTTAAACAATAACCAACATTTTGAGTTGGGAAATACATAATTACTTCTGGGGGAAGAAATGGAACTTTTAACATTTAAAGTTCATTGTTTTAAATGTTAATTCCATCCCCAACATTTTTGTGTTACGTGAGGCTTTATGAAAGTTATTGAAAGTAGAATATTCAAAGATCATTTTCCCAAATTTAACGTTTTGATTAAATTTTAATTATGAAGTTAAATTATATTTATGGTGCTGTATTTTGTATAATATCTATTGTCCTCAAATTTCTTGACATTTATTTCTCATATAGTCTTATCCTTATTTCCTATTCCATCATTTCTCTCTTGCTTGCTCTTACCTTCATTTCTCTTTCTGCAATGAAGACTGTACCTAATTTAGCAAACTTCAACAAAACTGGCAATTTATGATTCATTGATGGGAGAAGTACAGTAGAAAGGCCCTGCAGTTTAGAGTTAAGATGTGTTTGTTTATTTATATGTGTGCCCATTTGTTACTCTTAGACCTATCTTAATTAAATTTAGAATATGATACTTTGACATAAAAGCATTGTAAGTATTTTCTAAAAAATAAAACTATTGATACATATTAAAATTGCCATTGGTAATTGACTTTTGAAATCACATACAAGAATATTTAGAAACCCACTTGGGAAATGTGGTTTACATGTGTCACCAGATACATATTAGGCAGTACTACAAATGTTAATTCTTTAAACAATACTGTGGTGATGGCAATCAGTAATTTATTTCTTTGTCCTGTAACTTATCATCCTTGTCTTTTGTAATTCCTAACAAAGTATTAACAAAATTGTACCTTATGTTTGTTCTTAGTATCCGTAAATTTTAAGGTGGAAAATCATTCAGTTAATAGTTGATGTGATGTTGTATATGGACAAAATGTCCATTAAACTAAAATTCAGTAAAGAAAGGTAAACTAAACTGGCTTGGTTTATAAAAGATGTTTTGTTTGGCAGTTATTAGTCATTATAAGCAATTATCTTCAAAGAAATAAAAAACTGGACTAATTTGTTGCCATTCTTTATGGGATGTTTACAATAAAATTCCAAGTTGTTTGGAATCAGTTGCACTCTTGCTGCTTTGTGCTTCAACTCAGATACTGGAGATAAATTAACAAGAAGAAAGAAATATGGAGTTACCTTTCCATTATCCAGCTTCAGAGACTGTAACATGTAACTCTTAGGCCTTTCCTTTCTTGTTTCTTGTAATATAGTATTTCATT EMBV3_24800 GAAGGGAGGCCACATCTGCAACACAGCCTCTCGTCACTGCTGCTCCTTGTTTTTACTTGT Gene BVT0102_121229 + 1 EMBV3_08737 GK000010.2:25861851-25862555 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00016488 TCONS_00013199 TCONS_00016477 TCONS_00016481 TCONS_00016484 TCONS_00016493 TCONS_00016478 TCONS_00016486 TCONS_00016475 TCONS_00016487 TCONS_00016485 TCONS_00013200 TCONS_00016489 TCONS_00016480 TCONS_00016483 TCONS_00016474 TCONS_00016491 TCONS_00016494 TCONS_00016476 TCONS_00016479 TCONS_00016482 TCONS_00016490 TCONS_00016492 2 XLOC_008809 XLOC_008026 Coding TCONS_00013199 XLOC_008026 Coding Coding SUPT16H 10:25826893-25862703 = TSS9833 4923 1 TCONS_00013199_6 1047 26 0.863246669831607 0.000139266551263717 4.26984719261627e-05 4.71484111053987e-05 0.00015288669794951 7.04320312115351e-05 8.28429271293725e-05 0.000262466833825087 0.000285711426653768 0.000313614294784943 7.6195406670354e-06 0.000390454926117728 0.000199025891904124 6.45777395856278e-61 1.02101015818527e-16 2.32836128489535e-05 0.0137398746475046 0.000193281816462909 0.00953500783643747 5.78211207889159e-05 7.7098318284155e-15 1.68336412483653e-05 0.0053136365705753 0.00552135052302397 0.00548273312076285 0.000663800044898314 3.52261859188258e-05 0.000114561149720175 0.00136999914943894 0.00106013485891043 0.00252185333595256 NM_001192392.1 SUPT16H Bos taurus suppressor of Ty 16 homolog (S. cerevisiae) (SUPT16H), 0.0 6872 100.00 0.773715214300223 NM_007192.3 SUPT16H Homo sapiens suppressor of Ty 16 homolog (S. cerevisiae) (SUPT16H), 0.0 6426 91.69 0.91549867966687 TCONS_00013199_6 sp|Q9Y5B9|SP16H_HUMAN SP16H_HUMAN FACT complex subunit SPT16; 0.0 2161 99.71 0.999044890162369 4 coding 1 0 1 1 -0.312178965848355 0.203312762418628 -0.0373689643082869 0.533350820309786 CGAAACTCTGGACTCTTTTTGCGTTGCACGTTTTGTTGCTTTCCCCCCTCTTCCTTCCTCTCCTCCCCGTAACCTCCGGAGGAAGGATTTTTTTAAAAAAGAATTCCGATCGCTGCCGGGACCCGGAAGCGGAAAGGGCATCTTTGAGGTCGATACTTCCGGGTCACTGGGAGAGTGCGGGATTCCGGGGCCGAGAGAGGGTGGCGGAGCCGGGACCTCGCGTGATTCTCGGAACCCGAGGAGAAGCGGCGTCTGTGGCTATGGCTGTAACTCTCGACAAAGACGCTTATTATCGACGAGTGAAGAGACTGTACAGCAATTGGAGGAAAGGAGAAGATGAGTATGCCAACGTTGATGCCATTGTTGTATCAGTGGGTGTTGATGAAGAAATTGTTTATGCCAAATCAACTGCCTTACAGACGTGGCTCTTTGGTTATGAACTAACTGATACTATCATGGTATTCTGTGATGACAAAATCATCTTTATGGCCAGCAAGAAAAAAGTGGAGTTCCTGAAACAGATTGCCAACACGAAGGGCAACGAGAACGCTAACGGGGCGCCTGCCATCACACTGCTTGTACGAGAAAAGAATGAAAGTAACAAGAGCAGCTTTGACAAAATGATTGAAGCCATTAAAGAAAGCAAGAATGGCAAGAAGATTGGAGTGTTCAGCAAAGACAAATTTCCAGGAGAGTTCATGAAGAGCTGGAATGACTGCCTCAACAAAGAGGGCTTTGACAAAATAGACATCAGTGCAGTTGTGGCCTATACCATTGCTGTAAAGGAGGATGGAGAGCTCAATCTAATGAAGAAAGCAGCTAGCATCACCTCTGAGGTCTTCAACAAATTCTTCAAGGAAAGAGTCATGGAAATAGTAGATGCAGATGAGAAAGTTCGACACAGCAAACTGGCTGAGTCTGTGGAAAAGGCCATAGAAGAGAAAAAATACCTAGCTGGGGCAGACCCTTCTACTGTGGAAATGTGTTACCCTCCTATCATTCAGAGTGGTGGCAACTATAATCTCAAGTTCAGTGTGGTGAGTGACAAGAATCATATGCATTTTGGGGCCATTACCTGTGCCATGGGTATTCGCTTCAAATCTTACTGCTCCAACCTTGTTCGCACTTTGATGGTTGATCCTTCTCAGGAGGTTCAAGAAAATTACAACTTTTTGCTTCAGCTGCAAGAGGAGCTGCTAAAGGAACTAAGACATGGCGTGAAGATATGTGATGTATATAATGCTGTCATGGATGTGGTTAAAAAGCAGAAGCCAGAGCTGCTGAACAAAATTACCAAAAACCTAGGGTTTGGAATGGGCATTGAATTCCGTGAAGGTTCTTTAGTAATTAATAGTAAAAATCAGTACAAACTAAAGAAAGGGATGGTTTTCAGCATCAATTTGGGATTCTCAGATTTGACTAACAAGGAAGGGAAGAAACCAGAAGAGAAAACCTATGCCCTGTTCATTGGAGACACAGTGCTTGTGGATGAGGATGGCCCAGCTACCGTTCTCACTTCTGTGAAGAAGAAAGTGAAGAACGTAGGGATTTTTCTAAAGAATGAGGATGAGGAAGAAGAGGAAGAGGAGAAAGATGAAGCTGAGGACCTGTTGGGAAGAGGTTCCAGAGCAGCTTTACTTACAGAAAGAACACGAAATGAGATGACTGCAGAAGAGAAGCGAAGAGCCCATCAAAAAGAACTGGCAGCTCAACTCAACGAGGAAGCAAAGAGGCGATTAACTGAACAGAAAGGGGAACAGCAGATTCAGAAAGCTCGTAAATCTAATGTGTCCTATAAAAACCCATCTTTGATGCCTAAGGAACCACACATACGGGAAATGAAGATCTATATTGATAAAAAATACGAGACTGTAATAATGCCTGTGTTTGGCATTGCAACACCTTTTCACATTGCCACAATCAAGAATATAAGTATGTCTGTGGAAGGAGATTATACTTACTTGCGAATCAACTTCTATTGCCCAGGCAGTGCTCTGGGCAGAAATGAGGGCAACATCTTTCCCAACCCAGAAGCTACTTTTGTCAAGGAAATTACATACCGAGCTTCAAATATGAAGGCACCTGGAGAACAGACAGTTCCAGCCTTGAACCTTCAGAACGCTTTCCGAATTATAAAAGAAGTGCAGAAGCGTTACAAGACTCGGGAAGCGGAAGAGAAAGAGAAGGAGGGCATTGTGAAACAAGATTCACTGGTGATCAATCTAAACCGGAGTAATCCCAAACTGAAAGATCTGTACATTCGCCCAAACATTGCCCAAAAGAGGATGCAAGGCTCACTGGAGGCCCATGTCAATGGTTTTCGCTTCACGTCTGTCCGAGGAGACAAAGTGGATATTTTGTACAATAACATCAAGCATGCTTTATTCCAGCCATGTGATGGGGAAATGATTATTGTCTTGCACTTTCACCTCAAGAATGCCATCATGTTTGGGAAGAAGCGGCATACAGATGTGCAGTTCTACACAGAAGTCGGGGAGATCACCACAGACTTGGGGAAACATCAGCATATGCATGACCGAGATGACCTCTATGCTGAGCAGATGGAAAGAGAAATGAGGCACAAACTGAAAACAGCCTTTAAAAATTTCATTGAAAAAGTAGAGGCTCTAACCAAGGAGGAACTGGAATTTGAAGTGCCTTTTAGGGACTTGGGGTTTAATGGTGCTCCCTATAGGAGCACCTGCCTCCTTCAGCCTACTAGCAGTGCGCTGGTAAACGCTACAGAATGGCCACCTTTTGTGGTAACGTTGGATGAAGTGGAGCTGATTCACTTTGAGCGAGTCCAGTTTCACCTGAAGAACTTTGACATGGTGATCGTCTACAAGGACTACAGCAAGAAAGTGACAATGATCAATGCGATTCCTGTTGCCTCTCTTGACCCCATCAAGGAATGGTTAAATTCCTGTGACCTAAAATACACAGAAGGAGTACAGTCCCTCAACTGGACTAAAATTATGAAGACCATTGTTGATGACCCTGAGGGCTTCTTTGAACAAGGTGGCTGGTCTTTCCTGGAACCTGAGGGTGAGGGGAGTGATGCTGAGGAAGGGGATTCCGAGTCTGAAATCGAAGATGAGACTTTTAATCCTTCAGAGGAAGACTATGAAGAGGAGGAGGAGGACAGTGATGAAGATTATTCATCAGAAGCTGAAGAATCAGATTATTCCAAGGAATCATTGGGCAGTGAAGAAGAGAGTGGAAAGGATTGGGACGAACTGGAGGAAGAAGCCCGAAAAGCCGACCGTGAAAGCCGCTATGAGGAAGAAGAAGAACAGAGTCGAAGTATGAGCCGAAAGAGGAAGGCATCTGTGCACAGTTCAGGCCGAGGCTCTAACCGAGGTTCCAGACACAGCTCTGCGCCTCCCAAGAAAAAGAGGAAGTAACTTCAGAACTTTGGCCCTCAGCTCCATTCTTCCTACAGCCAATCCCTGAAAATTTTACATGACATAGAAACTGTATTTTTTCCTTTTTTTTTTTTCTTTTGAAGTTTTGCCATTTGTGTATGGGTTTAGGGGGCCATTTGTGTGGACCAAGCTACTCGGGGAATTCCAGGCCCACCAGGACACGTGCCAATGGCCCCATCCAGATGGCAAGGGAGGAGGTGTTCTTGAAGAAGGGCAGAGGCTTCCGCTGTTAATAAATACCGTTTCATTCCTCTCTCTTCCTGTCACCTTCTGCCAGGACATTGTTGGCTTCTGACATCTTATTCTTCGATGTCTTAAAGCTATATTTCCAAGACATTGGTACAAGGTGACCTTTGCTGCCTGTACCATGGCTCTTGACCAGCAGATGCGATCCTCCCATCTTACCCGCCTGCCATGACCTTCCTCACGTCTCTTTAAGACACATCTTTGCAGAACTCAAGAAAAGGTTCTTGGAATTTGCTAATGGTGTAAGCAATACAACTTGAGATAGGCTGATCAGGCTGGTATCTCCGTCTAAGTTTTCCTGCTTTCTTGCCTCAGGCAGATTCTGAGGTATTTTTACTGCCTTGGAAGACGTAAGAAGCAGTGATACTCCCTGGCTCAGTTTCATCTTCCTTACAAATTCACACATGGTACAATGGTGGAAGCAAAATTACCATTGTTTCTTTTGTGATGTATGAGGAAAGAATGGCTGTGCCTCATGTACTGCTTCTAGTGAAATCTAGAAGGAGGTCAAAGGAGTCAACATTTAGATCTGGAAGGGGCAAGTCATGCCTTGGGCCTAGAATACCCTGATGAGAAAAGAGAAGAGGAAGGGAGGCCACATCTGCAACACAGCCTCTCGTCACTGCTGCTCCTTGTTTTTACTTGTCTTGCATTGTCCTGTATTTATCACAGTTTCTGTTGAACAGCTTTTTAAGTATTTGGGGAGTTTATCTTGCCATCCTCCCTCCTGGTTCTCTGCACCCACCTGTCCCACTGCAGTTCCTTCTGTGTTCTGTGACTTTAAGAGAAGAGGGGGGAGGGGTCTCGGATTTTTGTTCATTTGTTTGTTTATTTTCTCCTTAGCAGTAGGACTTGATATTTTCAATTTTGGAAAAACTAAAAGATAAATAAACTGTGGTTTTTTTTTTGTTGTTGTTTTGTTTTTATAAATTTACTTTCTGTGACAATTCTTTTGCAGTTCAGTTCCTAAAAACAAGCCTGCTTCTCTCCTAAAAAAGTGCTAAGGCATAGAGAATAATTCTCTTTACCCAGCTAGTATCACAAAAAGGAACTTTTATCACTCTAAACTTTCATGATTAGGTTGAGATATCACAGTAAACCAAATTCATAGTAGAGCAAGTTACTTTATAAGAGACTTTTGACTATGGTTCCCTCAGGGTTTAGAATGGACTAGCACTTGTTCCATCAGGAACACAAATCTTCAGTCATCTCCTTGTAAATAGCTTGGAGGGCAGCAGCAGCTTGAAGAGAC EMBV3_03011 CCATCTCAGTATGAGGAGGCTTTGAGAGATGAGGAAGAGCGAGCCCGAGCCAGAATTGAA Gene GeneID:539382|MAGEB16:XM_002700239:236_cdna Constitutive 0 NULL GeneID:539382 X GENE MAGEB16 NULL melanoma antigen family B, 16 EMBV3_07408 CACCCAAGTCCAAGAAACCCAGAGAGTACCAAACAGGATAAACCCAAGGAGAAACACCCC Gene BVT0102_123016 + 0 NULL GK000009.2:31441375-31895269 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00218178 TCONS_00208613 TCONS_00148278 TCONS_00066191 TCONS_00207277 TCONS_00022579 TCONS_00156637 TCONS_00214738 TCONS_00249013 TCONS_00185686 TCONS_00115687 TCONS_00141680 TCONS_00115729 TCONS_00030974 TCONS_00220662 TCONS_00187806 TCONS_00040555 TCONS_00252354 TCONS_00249292 TCONS_00189889 TCONS_00157441 TCONS_00250931 TCONS_00040584 TCONS_00210523 TCONS_00187583 TCONS_00249282 TCONS_00231021 TCONS_00190337 TCONS_00189806 TCONS_00170310 TCONS_00250580 TCONS_00152647 TCONS_00079671 TCONS_00110355 TCONS_00056970 TCONS_00230725 TCONS_00148670 TCONS_00062742 TCONS_00255185 TCONS_00165812 TCONS_00250544 TCONS_00117462 TCONS_00019962 TCONS_00175821 TCONS_00232966 TCONS_00245928 TCONS_00141532 TCONS_00020011 TCONS_00064058 TCONS_00238893 TCONS_00251214 TCONS_00008117 TCONS_00040697 TCONS_00197112 TCONS_00233559 TCONS_00238308 TCONS_00240534 TCONS_00230489 TCONS_00022065 TCONS_00032588 TCONS_00020016 TCONS_00210648 TCONS_00239374 TCONS_00232347 TCONS_00108588 TCONS_00160991 TCONS_00210178 TCONS_00251452 TCONS_00201770 TCONS_00253720 TCONS_00207754 TCONS_00135548 TCONS_00056147 TCONS_00021194 TCONS_00189353 TCONS_00019991 TCONS_00185880 TCONS_00229354 TCONS_00175849 TCONS_00224114 TCONS_00098220 TCONS_00036946 TCONS_00199613 TCONS_00020022 TCONS_00198661 85 XLOC_131641 XLOC_127126 XLOC_090160 XLOC_040908 XLOC_125795 XLOC_013249 XLOC_095097 XLOC_130757 XLOC_151956 XLOC_111739 XLOC_069856 XLOC_086108 XLOC_069898 XLOC_017223 XLOC_133979 XLOC_113849 XLOC_024371 XLOC_155295 XLOC_152235 XLOC_115926 XLOC_095896 XLOC_153874 XLOC_024400 XLOC_129033 XLOC_113628 XLOC_152225 XLOC_140510 XLOC_116372 XLOC_115843 XLOC_103556 XLOC_153523 XLOC_092412 XLOC_048555 XLOC_066259 XLOC_034773 XLOC_140215 XLOC_090550 XLOC_037469 XLOC_158117 XLOC_100652 XLOC_153487 XLOC_071628 XLOC_010640 XLOC_105600 XLOC_142448 XLOC_150855 XLOC_085960 XLOC_010689 XLOC_038784 XLOC_145559 XLOC_154157 XLOC_003677 XLOC_024513 XLOC_118775 XLOC_143041 XLOC_144975 XLOC_147198 XLOC_139979 XLOC_012736 XLOC_018828 XLOC_010694 XLOC_129158 XLOC_146040 XLOC_141832 XLOC_064493 XLOC_097884 XLOC_128688 XLOC_154393 XLOC_123415 XLOC_156659 XLOC_126269 XLOC_081771 XLOC_033950 XLOC_011867 XLOC_115392 XLOC_010669 XLOC_111933 XLOC_138849 XLOC_105628 XLOC_137410 XLOC_058466 XLOC_021259 XLOC_121266 XLOC_010700 XLOC_120315 Coding TCONS_00229354 XLOC_138849 NonCoding NonCoding - 8:2557529-2558613 - TSS170858 1084 1 TCONS_00229354_2 118 0.997232472324723 1 0 2.51027591171023e-06 0 2.13423121305016e-06 0 0 0 1.84450574633871e-06 0 0 6.46362951175192e-05 3.99413746252622e-05 1.55532181485613e-05 1.35645042964244e-05 0.00014489275163546 5.78133364332646e-06 0.002164817523245 0.00318171808389475 0.00462562329167112 0 3.31707035394452e-06 0 0.00320644011591593 0.00184796150768437 0.00222080368255703 0 6.49950411920376e-07 0 0.000293836862500732 0.00101979446118106 0.000306281287184322 XR_229156.1 LOC101907943 PREDICTED: Bos taurus uncharacterized LOC101907943 (LOC101907943), 2e-79 300 80.47 0.310885608856089 0 noncoding 0 0 0 0 0.044186773713356 0.68151882467206 -0.00421894400467007 0.937197478317913 GGGGTGTTTCACCTTGGGTTTATCCTGTCTGGGACTCTCTGGGTTTCTTGGACTTGGGTGGCTATTTCCTTCCCCATTTTAGGAAAGTTTTCAACTATTATCTCCTAAAGTATTTTCTCATGCCCTTTGTTTTTGTCTTCTTATTCTGGGACTCCTATGATTCAAACATTGGGGCCTTTAACATTGTCCCAGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCCTTTTTCTTCTTTCCTCTCTGCTTCACTTACTTTCATCATTCTATCTTTCACATCACTTATCCTATCTTCTGCCTCAGTTATTCTACTATTGGTTCTGAAAGGTTGTTGTTGAATCACGCGAAGACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTGAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGCGGCAGAAAGAGTACCCGCCTGCTAGTCTTCAGCTGGATGTTATATAGTCACTAGTAGTCTGTTAATGAAAGAAAGGAATGTCTTAAAATTCAGAATGGCACCAGGCCCCTCACTCATAAGATGCATTTTGGGATAGTCTTGGCGCCAAATGGTTTATCCTGGGCCATAAAATGATTAACTTGAATCTTGAAGAAGGACAGATCACCATACAAATAGTTTCATTTACATAGATTAGGAGAACAATATCCATACTGGTTTGTCAAGTAGGTTCTGGGCCAAGAGGCGGAACCAACTTGGAGACAGAGTTTGGGGTAAAGGCATAGTACATTAGCATAGCTTAAGACAAACATTTCCATAAGAAAAAGGCATTGGTTATCTCTAGGCTCAAGAATAGCTAACTTCAGGCGAAACCAGGTGTCATTATGGCCACACAGTATTTTAAGAGAAACCTCCCTTTAAATTTGTATAGAGAAGGAAAAAATATTGCTAGTTTGTTTCCTCCTGCCGCTTAAGAGAGATAAAAATGTCTGACACTTGCAGGCTATTTCCTCCATTTGGAGACCCCTGGCCTTCCTGCCTGTTACCCTCTCA TCONS_00226773 . 5' 692321 TCONS_00226773 . 5' 692321 EMBV3_00419 AAGGAGCAGATGCTGGAGCTGCTGGTGCTCGAGCAGTTTCTGAGCGCGCTGGACCAGCGA Gene GeneID:100126046|ZNF444:NM_001105649:5_cdna Constitutive 0 NULL GeneID:100126046 18 GENE ZNF444 MGC151633 zinc finger protein 444 EMBV3_40007 CTGGTGTTTGCGGGCTGCTGGCTGCCCTTCTTCATCGTCAACATCGTCAACCTGGCCTTT Gene GeneID:510344|SSTR5:XM_002697907:522_cdna Constitutive 0 NULL GeneID:510344 25 GENE SSTR5 NULL somatostatin receptor 5 EMBV3_36803 CCTGGGGGATCTCCGGGGAAGAGTGGCCAGATCTCTCAGCTTTTAAACAGAGTGGACTTG Variant GeneID:538402|LOC538402:XM_002690852:199_cdna 414^543 1 EMBV3_27491 GeneID:538402 10 GENE LOC538402 NULL similar to Protein FAM81A EMBV3_08563 GTCACTCTATTTTGATTTTCTTGTTCAGGCTAGGGCTTGAAAATGTTTTTCCTGGGAGGC Gene GeneID:508617|MGC127874:NM_001034325:224_cdna Constitutive 4 NULL GeneID:508617 10 GENE MGC127874 NULL hypothetical LOC508617 EMBV3_31649 AGACCATGGGGAGGGAAGATCCAGCATCAATGGAAATAAAGAGGGAGCCCGTAGCAGCCT Gene GeneID:100139285|KNCN:XM_002686506:646_cdna Constitutive 0 NULL GeneID:100139285 3 GENE KNCN NULL kinocilin EMBV3_14135 CAAAACTATGTTAATCCCTCAGTTGTGCTGGAGTGAAAAAGCTGGTTGAGACCACTGGAC Gene GeneID:617339|FBXO36:NM_001082617:184_cdna UTR3_Alt 3 NULL GeneID:617339 2 GENE FBXO36 MGC152144 F-box protein 36 EMBV3_02343 TTCCCAGCATCGGTTTCTCTTCTTCCTCCGAAGAGACAGGTGCCGACTCCAAAGATGAAG Gene GeneID:527701|AHNAK2:XM_002696792:515_cdna Constitutive 0 NULL GeneID:527701 21 GENE AHNAK2 NULL AHNAK nucleoprotein 2 EMBV3_43539 GGCTCTGCCTATCATCATGGTTGTTGCCTTTTCCATGTGCATTATCTGTTTGCTGATGGC Gene GeneID:530577|SACM1L:NM_001102131:134_cdna UTR3_Alt 3 NULL GeneID:530577 22 GENE SACM1L MGC159686 SAC1 suppressor of actin mutations 1-like (yeast) EMBV3_41175 TGGAGATTTTGCTGGAAACCTTCATATATGGAACCGTAAAGGTGTGGGACCCAAGGCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06274 TGGGGAGCTTACTCTGCAATACAAAAATCTCTTCATGTTCTGGTAGGGCCTGGATGGCGG Gene GeneID:505469|FOXN3:XM_002691110:28_cdna UTR3_Alt 2 NULL GeneID:505469 10 GENE FOXN3 NULL forkhead box N3 EMBV3_31072 ACGAAGCTACTTTTGGAGCGTCTAGGAACGGACTCAATGTCAGGAGGATAATTCAAGAGC Gene GeneID:519714|TTLL2:NM_001075793:5_cdna Constitutive 0 NULL GeneID:519714 9 GENE TTLL2 MGC151947 tubulin tyrosine ligase-like family, member 2 EMBV3_40992 TGTGGTGAGCTGGGGCAAGGGCTGTGCTCTGCCCAACCGTCCAGGGGTCTATACCAATGT Gene GeneID:528784|PRSS33:XM_002697866:387_cdna Constitutive 0 NULL GeneID:528784 25 GENE PRSS33 NULL protease, serine, 33 EMBV3_37839 AGCTGGGTGTGGTGGTCAACAGGCCACGCTTTTTGGGATTTGTGGGTGACTGCCTGCTCT Gene GeneID:509958|MVD:NM_001075424:180_cdna Constitutive 0 NULL GeneID:509958 18 GENE MVD MGC143429 mevalonate (diphospho) decarboxylase EMBV3_36287 TTGACACGCAGACACACCACTGATAACACTGACAGACCTACATGCACACAGGAGACATGG Gene GeneID:617304|FBXL12:NM_001040600:11_cdna Constitutive 0 NULL GeneID:617304 7 GENE FBXL12 MGC128704 F-box and leucine-rich repeat protein 12 EMBV3_02800 AGAATGTGTCATCCTTGGCGAGTGGCAGTCCATCAGCAAACATCCTGACCACCACTTTGT Gene GeneID:526424|LNX2:NM_001075884:55_cdna UTR3_Alt 2 NULL GeneID:526424 12 GENE LNX2 MGC139931 ligand of numb-protein X 2 EMBV3_40516 CCTGCTTACGTTGGTAATCGTGATGCATGGAACCACAGCAGCCATCTTAGGACCATGAGG Gene GeneID:510719|TXNL4B:NM_001014897:186_cdna UTR3_Alt 3 NULL GeneID:510719 18 GENE TXNL4B NULL thioredoxin-like 4B EMBV3_39306 GAAAGAGTTGTTATAGCATAGGTGGCCACTGTGATGTCTCGTGAATGGCTGCTCCTGGAG Gene GeneID:100336728|LOC100336728:XM_002698907:88_cdna Constitutive 0 NULL GeneID:100336728 28 GENE LOC100336728 NULL paladin-like EMBV3_41044 CCCCTTAAAGGAGGGAATTGCTCAGAGGACATCTCATGTATCCTGAAAAGGGCTCCATTC Gene GeneID:574056|TNFSF8:NM_001025207:53_cdna UTR3_Alt 2 NULL GeneID:574056 8 GENE TNFSF8 TNFRSF8 tumor necrosis factor (ligand) superfamily, member 8 EMBV3_43233 GAAAGAAGCAAATTACTATATGGTATTACACATATGCTGTTCCACCTTAATACATCTCAT Gene GeneID:539505|ZNF483:NM_001105423:8_cdna Constitutive 1 NULL GeneID:539505 8 GENE ZNF483 MGC157037 zinc finger protein 483 EMBV3_42624 ACAATCCAGATAGAGATCCTGGAGATCGTCTTATTAGGCATAGAGCCTGTGCTTTAAGAG Gene BVV0101_006311 + 0 NULL GK000014.2:18071677-18126450 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00051436 TCONS_00051440 TCONS_00051429 TCONS_00051432 TCONS_00051431 TCONS_00051433 TCONS_00051430 TCONS_00051427 TCONS_00051434 TCONS_00051441 TCONS_00051438 TCONS_00051428 TCONS_00051437 TCONS_00051435 1 XLOC_031191 Coding TCONS_00051441 XLOC_031191 Coding Coding - 14:18081586-18102951 - TSS38352 2163 1 TCONS_00051441_2 688 14 0.899410222804718 0.00541892225995464 0.00696367512838719 0.0033213149653126 0.00123530186636478 0.00310311473628163 0.00250114257504641 0.0010719186593958 0.00156078292963311 0.000495313447460047 0.00225288315127473 3.64079274064856e-05 0.000774764681435418 0.000245830674849087 0.00130986260503394 0.00117327411681252 0.00664189833328094 0.00118098145537795 2.42481337648312e-08 0.0071558095108212 0.00633099647633546 0.00319547801105174 0.00179839347967533 0.00251905829584809 0.0025078003133451 0.0077097577234187 0.00730040613267167 0.00423285622862978 0.00161594698405363 0.000489166853360049 0.000290340687437946 XM_005212980.1 ATAD2B PREDICTED: Bos taurus ATPase family, AAA domain containing 2B (ATAD2B), transcript variant X1, mRNA. 3e-131 473 73.57 0.361997226074896 NM_014109.3 ATAD2 Homo sapiens ATPase family, AAA domain containing 2 (ATAD2), mRNA. 0.0 3061 92.68 0.959778085991678 TCONS_00051441_2 sp|Q6PL18|ATAD2_HUMAN ATAD2_HUMAN ATPase family AAA domain-containing protein 2; 0.0 1322 95.05 0.966569767441861 2 coding 0 0 0 0 0.0373154105310338 0.785214038475803 0.00598266488487677 0.912301666756313 GTCCACCTGGAACTGGAAAAACTCTGGTTGCTAGAGCACTTGCCAATGAGTGCAGTCAAGGGGATAAAAGAGTAGCATTTTTCATGAGGAAAGGTGCCGATTGTCTGAGTAAGTGGGTAGGAGAATCTGAGAGACAGCTGCGATTGCTATTTGATCAGGCCTATCAGATGCGCCCATCAATTATTTTCTTTGATGAAATTGATGGTCTGGCCCCAGTACGATCAAGCCGACAAGATCAAATTCACAGTTCAATTGTTTCCACCTTGCTAGCTCTTATGGATGGATTGGACAGCAGAGGAGAAATTGTGGTCATTGGTGCTACCAACAGACTGGATTCTATTGATCCTGCTTTACGAAGGCCTGGTCGTTTTGACAGAGAATTCCTATTTAGCCTACCTGATAAAGATGCTCGAAAAGAAATTCTAAAAATTCACACAAGGGATTGGAATCCTAAACCACTGGACATGTTTCTGGAAGAACTAGCAGAAAACTCTGTTGGATACTGTGGTGCAGATATCAAGTCAGTATGCTCTGAAGCTGCTTTATGTGCTCTGCGTCGACGCTACCCACAGATCTATACCACTAGTGAGAAACTGCAATTGGATCTCTCTTCAATTAATATCTCAGCTAAGGATTTTGAGGTAGCTATGCAAAAGATGATACCAGCCTCCCAGAGAGCTGTGACGTCACCTGGGCAGGCACTGTCCACCATTGTGAAACCACTACTGCAGAGCACTGTTCACAAGATCCTAGAAGCCCTGCAGAGAGTGTTTCCACATGCGGAAACCAGGACAAACAAAGCGTTAGACTCCGATATTTCTTGTCCTCTCTTAGAAAGTGACTTGGCATACAGTGATGATGATGTTCCATCGGTATATGAAAATGGACTTTCTCAAAAATCCTTTAATAAGGCAAAAGAAAATTTTAATTTTCTTCATTTGAATAGAAATGCTTGTTATCAACCTATGTCTTTTCGACCAAGAATGCTGATAGTGGGCGAACCAGGATTTGGGCAAGGTTCTCATTTAGCACCAGCTGTCATCCATGCTTTGGAAAAATTTACAGTGTACACTTTAGACATTCCTGTGCTTTTTGGAGTCAGTGCTACATCTCCTGAAGAAACATGTGCCCAGGTGATTCGTGAAGCTAAGAGAACAGCACCAAGTATAGTGTATGTTCCTCACATTCACTTGTGGTGGGAAATAGTTGGACCAACACTCAAAGCCACATTTACCACATTATTACAGAATATTCCTTCTTTTGCTCCAGTTTTACTACTTGCCACTTCTGACAAACCCCATTCCACTCTACCAGAAGAGGTACAAGAATTATTTATCCATGACTACGGAGAAATTTTTAATGTCCAGTTACCTAGTAAAGAAGAACGGACACAGTTTTTTGAAGATTTAATTCTGAAGCAAGCTGCTAAGCCTCCTATATCCAAAAAGAAAGCAGTTTTGCAGGCCCTGGAGGTACTCCCTGTGGCACCACCACCTGAGCCAAGACCACTGACAGCAGAAGAACTGAAACGACTAGAAGAACAAGAGGAAGATACATTTAGAGAACTGAGGATTTTTTTAAGAAATGTTACACATAGGCTTGCTATTGACAAGCGATTCAGAATATTTACTAAACCTGTTGACCCTGATGAGGTTCCTGATTATGTCACTGTAATAAAGCAACCAATGGACCTTTCATCTGTAATCAGTAAAATTGATCTCCACAAGTATCTAACTGTGAAAGACTATTTGAGTGATATTGATCTGATCTGTAGTAATGCTTTAGAATACAATCCAGATAGAGATCCTGGAGATCGTCTTATTAGGCATAGAGCCTGTGCTTTAAGAGATACTGCCTATGCAATAATTAAAGAAGAACTTGATGAAGACTTTGAGCAGCTTTGTGAAGAAATTCAGGAATCTAGAAAGAAGAGAGGTTGTAGCTCTTCCAAATATGCCCCATCTTACTACCATGTAATGCCAAAGCAAAATTCCACTCCTGCTGGTGATAAAAAATCAGATCCAGAGCAAAGTGAAAAGCCAAACAGGCCCAGTACTCCTATGGCTTGCAGCACTCCTGGGTATAACTCCACAGAGTACCCACCCAAATTCTGTGGGTTTTCCAAGGCCTCTTCCTTGGCAGGCTCCTAATTCCAGTTTTTGC TCONS_00051435 TCONS_00051438 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051430 s 5' 0 TCONS_00051435 TCONS_00051438 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051435 TCONS_00051430 s 5' 0 EMBV3_40679 TCCCAGCCACTAGCAAGACTGCCCGCCAAGGGACTTGCTGTGCTATCAACAAGGTGCTTA Gene GeneID:508569|LOC508569:XM_002694971:133_cdna Constitutive 1 NULL GeneID:508569 18 GENE LOC508569 NULL similar to CG5913 CG5913-PA EMBV3_21861 TGCGGGGTTACTTTATTCCCCTCAAAGTCCTCCTCTCTATCCGCACCCCACTGAGGAAAT Gene BVV0102_184124 + 0 NULL GK000010.2:20837714-20838544 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00019797 1 XLOC_010476 NonCoding TCONS_00019797 XLOC_010476 NonCoding NonCoding - 10:20837877-20838428 - TSS13687 551 1 0 0.00390144884404978 0.00133127985685755 0.00105807925265247 0.00325534612740002 0.0028046008186785 6.49193428371555e-06 0.000423354835129332 0.0049164116459722 0.00095941737708036 0.00259115676745667 0.00302455035402844 4.54260187255732e-05 0.000197881581747403 0.00198062858987815 0.00024486493196076 9.58679806000115e-05 0 0 0.00581742728636515 0.00520758882965567 0.0035315842587145 0 0 0 0.0049040044849773 0.00427075357762133 0.00700759001373448 0.000522968095615789 8.81055873244377e-05 0.000512841420931337 0 noncoding 0 0 0 0 0.0026153421051883 0.987475192307005 0.0305576246701055 0.591012129800855 CCCTGGCTCCTCCCCCAGAGCGCCTAGGCAATAAACCTCGTTCTAGGTCGCTTCCCCTCTTTGGTCCAGGCTGGTTCCACCCTTCTCCGGGTAGCTCCCGGTGCGGGGTTACTTTATTCCCCTCAAAGTCCTCCTCTCTATCCGCACCCCACTGAGGAAATCCCACTCAGCTGGGGACTCAACTCTGGCCAGCCTGAGCCCGTCAAGCCCCTCTGTCAGTCTTGAAGATACAGCGCCCTTCAGGAGGAAGCCCCCTCTCCTTCTTCCATATCCTCTATCCTGTCTCCCTCCTACTACTTCTCCCACTCACTCTGATCCCTCTCTGACCCTTGCCCGCAGTCGAGCCTTCCTGGGGGAGCCACACCACTGAGCACCCCCTTTCCCACTCTCCCACCCTTCTCATCCCTACACCAACCCTGACTATTCTTGGGCGGTCCTTTCCCTTCCCTCTAAGCCTCTCCCCTTCGAGAGACAGCCCCTGTTCAATCTCCGCCTGTTCCACTTGTCCTAGCCCCTCCCCCGGGCAGCCCCTGGGCTTGTGACCAGTCGGC TCONS_00016273 . 5' 69 TCONS_00016273 . 5' 69 EMBV3_27539 TTTGTACAGTGCGATGTGCTGCAGGGGCAGAAGGTGATGGTGGAGGAGAAACGGCCATGT Gene GeneID:539605|CFP:NM_001076178:102_cdna Constitutive 0 NULL GeneID:539605 X GENE CFP MGC140478 complement factor properdin EMBV3_02877 AAGGGAGAGCCCTGCAGTGCTGAGGAGCAGGTGTCCTGGGAAGACGTCCAGTGTACCTAT Variant GeneID:515202|USP18:NM_001017940:2_cdna 739^870 1 EMBV3_21157 GeneID:515202 5 GENE USP18 MGC157182 bubp43 ubiquitin specific peptidase 18 EMBV3_26069 TCGCTCCCACAGTGCAAAGAAGACGCCGAGATATTTAGTCTTGGATATTGCAGATAATCC Variant GeneID:616825|STYX:XM_002690462:357_cdna 329^513 3 EMBV3_04802 GeneID:616825 10 GENE STYX NULL serine/threonine/tyrosine interacting protein EMBV3_25300 TAAGGCCCCTGACCACACTTGGTAAAGCTCCGCCCTCCCCCACCCTTGATGTTGTGAACT Gene GeneID:504371|SLC25A22:NM_001075159:233_cdna Constitutive 1 NULL GeneID:504371 29 GENE SLC25A22 MGC142774 solute carrier family 25 (mitochondrial carrier: glutamate), member 22 EMBV3_31088 AGGATCTGAGCTCTTTCACTTCAGAGTGTCTGTTGTTCCGGGGGTCTCTTTCTGTAACTT Gene GeneID:617124|CATSPERB:XM_002696751:395_cdna Constitutive 0 NULL GeneID:617124 21 GENE CATSPERB NULL cation channel, sperm-associated, beta EMBV3_00124 TCATCAGAGAGAGCCAGATCCTTTATAACTTGGCTTAGAGACAGCAGACCATTAAGCCCA Gene GeneID:532862|SEC24B:XM_002688081:121_cdna UTR3_Alt 2 NULL GeneID:532862 6 GENE SEC24B NULL SEC24 family, member B (S. cerevisiae) EMBV3_14559 GAAAATGGTCTGCACAGGAGCCAAAAGCGAAGAGCAGTCTCGACTTGCAGCGAGGAAGTA Gene GeneID:615096|TBPL2:XM_002690913:200_cdna Constitutive 0 NULL GeneID:615096 10 GENE TBPL2 NULL TATA box binding protein like 2 EMBV3_26849 TCAGAAGTCATGTATGGATGTGAGAGTTGTGATGTAGGCGATAGATAGGCTCCAGGTTAG Gene BVT0101_026262 + 0 NULL GK000010.2:15041923-15080221 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13465 CCGAATTTGTGACCAGCGCTAAAGGTTCAGTGTTAGTATTGCTTGTGCTGGCCGTTGTGC Gene GeneID:780856|YPEL5:NM_001079793:80_cdna Constitutive 0 NULL GeneID:780856 11 GENE YPEL5 MGC127468 yippee-like 5 (Drosophila) EMBV3_23351 TTGTCATTGTTGTTGCCTTTGGGGCCCTGATTCTGGTAGAAACTTTGGATCTCGGGCAGG Gene GeneID:100337244|LOC100337244:XM_002691948:6_cdna Constitutive 0 NULL GeneID:100337244 12 GENE LOC100337244 NULL ATP-binding cassette protein C4-like EMBV3_08816 CGGCGGGGCCGGGGCTGGGGTCGGGGCCAGGCACTGAGAATTGGAAAACCAAGAAGGTTT Variant GeneID:506111|PRPSAP2:NM_001081513:472_cdna 78^172 1 EMBV3_07443 GeneID:506111 19 GENE PRPSAP2 MGC155122 phosphoribosyl pyrophosphate synthetase-associated protein 2 EMBV3_13122 CTGGCCCCATTCCACTCTCTTCTTGCACAGGAACATTTGCGAATACATCAGTTCTTGCTC Gene GeneID:616003|TM6SF1:NM_001102295:54_cdna UTR3_Alt 3 NULL GeneID:616003 21 GENE TM6SF1 MGC159520 transmembrane 6 superfamily member 1 EMBV3_07262 CTTAAGAGTCCCTTGGACAGTATGGAGATCATGCTGCCTTGTAGGACTAATGTAAAGAGC Gene GeneID:512484|TYK2:NM_001113764:29_cdna Constitutive 0 NULL GeneID:512484 7 GENE TYK2 NULL tyrosine kinase 2 EMBV3_08459 GTGTACATGCACATGGAAAGGGATTCCTATCCCAGGTTTCTGAAGTCAGAAATGTACCAG Gene GeneID:506654|RGS13:NM_001080232:5_cdna UTR3_Alt 1 NULL GeneID:506654 16 GENE RGS13 MGC152086 regulator of G-protein signaling 13 EMBV3_41912 ATAATAGCCCTTCCATCTGGCAGTGGGGGAAGAAGACACTCTTGACATTCTTGTCTCCTG Gene GeneID:767602|AP3B1:NM_001076534:60_cdna Constitutive 0 NULL GeneID:767602 10 GENE AP3B1 NULL adaptor-related protein complex 3, beta 1 subunit EMBV3_17107 GGACATGGGGCCATTGGCCAACCCTCCCAGAGCCCTCATCTATAAATGGCTCTCCCATAA Gene BVT0102_243505 + 0 NULL GK000016.2:48074324-48081091 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43315 CCTGCGCATTAGCCCGGACAGGATCTACATCAACTTCTGCGACATGAACGCGGCCAACGT Gene GeneID:280858|MIF:NM_001033608:16_cdna Constitutive 0 NULL GeneID:280858 17 GENE MIF MGC127044 macrophage migration inhibitory factor (glycosylation-inhibiting factor) EMBV3_02475 GATGCTAAAAGACGCAGCCTTAGAAATAGATAACCGACAGGGACCTAGCACAGGGAACCC Gene BVV0102_029578 + 0 NULL GK000027.2:34915035-34944420 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11841 CCCACGGCGGCAGGATCGACTACATCGCGGGGTGAACTGGAGATCCAGAGAGATGCCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18368 CTGACCTTCAACATTGGGCAGATCCTACTCATCTCCGATTATTTCTACGCCTTCCTGCGG Gene GeneID:535138|PIGU:XM_002692442:452_cdna Constitutive 0 NULL GeneID:535138 13 GENE PIGU NULL phosphatidylinositol glycan anchor biosynthesis, class U EMBV3_16514 GTCACCAGAGCTTCATGTTCTTACTCCATTTTCACTGGTGGCCTGAAATGTCCGTACTAC Gene BVV0102_330577 - 1 EMBV3_03838 GK000002.2:66295954-66585179 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05685 TCGCATAAAGATCAACCAGATTCAGATGAAGGAGACAGTGGAGGAGCAGGTCAGCACCAC Gene GeneID:617935|CUL4A:XM_002692015:17_cdna UTR3_Alt 2 NULL GeneID:617935 12 GENE CUL4A NULL cullin 4A EMBV3_12869 CCCAGCAGAGTTAGCATAAAGGAATCATCTGTAGCAAAACTAGGATCAGTATGCCGTAGG Gene GeneID:781884|MOBKL3:NM_001083526:149_cdna UTR3_Alt 3 NULL GeneID:781884 2 GENE MOBKL3 MGC137798 MOB1, Mps One Binder kinase activator-like 3 (yeast) EMBV3_03781 GCAATTTTGGTACCTTGTGTTGCACTGCAGTGGTCAGCCATATATCTCTGTGACATCAAC Gene GeneID:768315|LOC768315:NM_001078130:22_cdna UTR3_Alt 2 NULL GeneID:768315 15 GENE LOC768315 MGC142663 hypothetical protein LOC768315 EMBV3_12733 ATAGCAGAGGAAGAAGAGGGGCTGGCGGAGGATGAGCAGACTGAGGAAGAGAATCATTTG Gene GeneID:615630|C5H12orf12:NM_001038578:47_cdna Constitutive 0 NULL GeneID:615630 5 GENE C5H12orf12 C12orf12 MGC134556 chromosome 12 open reading frame 12 ortholog EMBV3_15299 TCGACCTGAGCACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAGCTAAAGAAGATCCTGG Gene GeneID:540432|MANF:NM_001101211:262_cdna Constitutive 0 NULL GeneID:540432 22 GENE MANF ARMET mesencephalic astrocyte-derived neurotrophic factor EMBV3_18836 GAACCGGTCAAAGTTGAGGAACCTGCCCCCACAAAGAAGCCTCCCAAAGAACAAAGAAGT Gene GeneID:507703|SKA1:NM_001075327:62_cdna Constitutive 1 NULL GeneID:507703 24 GENE SKA1 NULL spindle and kinetochore associated complex subunit 1 EMBV3_36073 AGCAGCTTCTCACACTTTCATGCCGCCTCCCTAGAATTCGGCCTTGTCATCCTGAACTCA Gene BVT0102_125427 + 0 NULL GK000025.2:26483400-26498129 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08574 ATCGTGTGCTACCTGAGCCTGCCCCACCTGATGAGAAGAATGGGATTCCCAACAGCCCGC Variant GeneID:531564|SLC29A2:NM_001103269:51_cdna 738^822 1 EMBV3_37845 GeneID:531564 29 GENE SLC29A2 MGC179613 solute carrier family 29 (nucleoside transporters), member 2 EMBV3_04637 GTTCCACGCGCTCCACAAGCGGATCAAGAAACTGGCCCACAGACCCCAAGGCCAGCAACC Variant GeneID:100125937|SNX22:NM_001105500:5_cdna 182^339 1 EMBV3_14171 GeneID:100125937 10 GENE SNX22 MGC142446 sorting nexin 22 EMBV3_23921 GGGTCCCCAAAGAGAGAGGGGTCTGGAATTCTCAAGGAGGAAGAAAGGACAAACTTTTTT Gene BVV0101_025275 + 0 NULL GK000007.2:574754-772144 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00175509 TCONS_00118457 TCONS_00118490 TCONS_00012285 TCONS_00059696 TCONS_00165977 TCONS_00118456 TCONS_00040258 TCONS_00145751 TCONS_00250203 TCONS_00233473 TCONS_00174807 TCONS_00232829 TCONS_00115210 TCONS_00251720 TCONS_00173459 TCONS_00072261 TCONS_00055707 TCONS_00082022 TCONS_00205117 TCONS_00204211 TCONS_00174806 TCONS_00031972 TCONS_00059695 TCONS_00161822 TCONS_00118487 TCONS_00232824 TCONS_00251680 TCONS_00036106 TCONS_00229794 TCONS_00031759 TCONS_00000529 TCONS_00198820 TCONS_00246741 TCONS_00170891 TCONS_00220566 TCONS_00061487 TCONS_00118040 TCONS_00239997 TCONS_00019195 TCONS_00010963 TCONS_00124524 TCONS_00216950 TCONS_00061490 TCONS_00123823 TCONS_00110449 TCONS_00174809 TCONS_00061485 TCONS_00242064 TCONS_00162767 TCONS_00018601 TCONS_00022895 TCONS_00107436 TCONS_00065412 TCONS_00010280 TCONS_00061489 TCONS_00125692 TCONS_00027918 TCONS_00118489 TCONS_00173458 TCONS_00092545 TCONS_00006385 TCONS_00006741 TCONS_00007850 TCONS_00197281 TCONS_00001865 TCONS_00166913 TCONS_00238581 TCONS_00036105 TCONS_00129710 TCONS_00198907 TCONS_00040981 TCONS_00061482 TCONS_00125637 TCONS_00219592 TCONS_00031886 TCONS_00246739 TCONS_00234240 TCONS_00087729 TCONS_00196823 TCONS_00174808 TCONS_00223565 TCONS_00118491 TCONS_00251851 TCONS_00132067 TCONS_00082029 TCONS_00145750 TCONS_00174805 TCONS_00056184 TCONS_00023655 TCONS_00171428 TCONS_00207933 TCONS_00188145 TCONS_00238985 TCONS_00188520 TCONS_00160961 TCONS_00089291 TCONS_00002600 TCONS_00207485 TCONS_00099018 TCONS_00070976 TCONS_00209974 TCONS_00246740 TCONS_00251625 TCONS_00118459 TCONS_00210913 TCONS_00056144 TCONS_00204210 TCONS_00205113 TCONS_00037569 TCONS_00241019 TCONS_00001867 TCONS_00090382 TCONS_00132066 TCONS_00080713 TCONS_00092544 TCONS_00118488 TCONS_00198905 TCONS_00078426 TCONS_00087730 TCONS_00170890 TCONS_00241565 TCONS_00018602 TCONS_00092546 TCONS_00205125 TCONS_00004603 TCONS_00228562 TCONS_00221350 TCONS_00056149 TCONS_00168038 TCONS_00001866 TCONS_00218901 TCONS_00009619 101 XLOC_105290 XLOC_072622 XLOC_072644 XLOC_007831 XLOC_036486 XLOC_100817 XLOC_024074 XLOC_088920 XLOC_153146 XLOC_142955 XLOC_104695 XLOC_142312 XLOC_069472 XLOC_154661 XLOC_104361 XLOC_044030 XLOC_033515 XLOC_050894 XLOC_124587 XLOC_124371 XLOC_018217 XLOC_098707 XLOC_142307 XLOC_154621 XLOC_021081 XLOC_139288 XLOC_018004 XLOC_000141 XLOC_120473 XLOC_151107 XLOC_103679 XLOC_133883 XLOC_036985 XLOC_072206 XLOC_146662 XLOC_009875 XLOC_006514 XLOC_076070 XLOC_131385 XLOC_075375 XLOC_066353 XLOC_148728 XLOC_099648 XLOC_009288 XLOC_013565 XLOC_063346 XLOC_040131 XLOC_005831 XLOC_077234 XLOC_015372 XLOC_056919 XLOC_001948 XLOC_002303 XLOC_003410 XLOC_118943 XLOC_000454 XLOC_101749 XLOC_145248 XLOC_078423 XLOC_120560 XLOC_024793 XLOC_077179 XLOC_132911 XLOC_018131 XLOC_143719 XLOC_052579 XLOC_118488 XLOC_136865 XLOC_154792 XLOC_080699 XLOC_033987 XLOC_014322 XLOC_103815 XLOC_126448 XLOC_114188 XLOC_145651 XLOC_114563 XLOC_097854 XLOC_054076 XLOC_000643 XLOC_126001 XLOC_059261 XLOC_042752 XLOC_128485 XLOC_154566 XLOC_129423 XLOC_033947 XLOC_021418 XLOC_147683 XLOC_055163 XLOC_049597 XLOC_120558 XLOC_047314 XLOC_148229 XLOC_001070 XLOC_138526 XLOC_134666 XLOC_033952 XLOC_102874 XLOC_132220 XLOC_005172 Coding TCONS_00125692 XLOC_077234 NonCoding NonCoding - 21:70794702-70801042 - TSS94451 6340 4 TCONS_00125692_7 105 0.98801261829653 1 0 2.08362195948575e-05 2.19038938762585e-05 2.70626700688443e-05 1.03367523033871e-05 1.79629059556395e-05 3.43966955432272e-05 4.48964505435094e-06 1.35738990743208e-05 1.61120674906755e-05 0.00131448951304115 0.00128266867111559 0.000449503965419676 4.68312844832501e-05 0.000163816302199277 6.65779280855032e-05 0.100508443864632 0.053091100758818 0.0885141419225431 1.00969035258535e-05 9.50207618345548e-06 1.2538535615388e-05 0.0600476039065956 0.0662454055717501 0.0724127528401807 1.72529992349659e-05 1.18214724344253e-05 7.89706870994983e-06 0.0236967144196625 0.0114190578953189 0.0325760852616019 XM_005216121.1 ZNF215 PREDICTED: Bos taurus zinc finger protein 215 (ZNF215), transcript 0.0 1191 90.07 0.13596214511041 NM_001202439.1 NCR3LG1 Homo sapiens natural killer cell cytotoxicity receptor 3 ligand 1 (NCR3LG1), mRNA. 1e-34 154 65.92 0.103785488958991 0 noncoding 1 1 1 1 -1.25959409632024 0.0813769993330861 0.00720252653094945 0.932219370990892 ACTGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCATAATTTACATTTTAAGATAACACTGTCCTCAGGCAGGATACATACTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAATAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTTCCTATCAACCTGCCTAGGAAATGACTCATTCCCCCCTTTTCTTTTAGGAGAAGTATGTTGCCTAGGGAAAAGGGGCGTCGTTTTTGTTCCATAACTGCTTCCGAGCTGACAAGGGGCGTTGTCCCTAAATTGGTGAGGCAACATATTCTCCTAATCCTCATATTGAGGATATCTGATCCAGGGGCCCCAAATAGTAGCTGGAGGAAGCTACAGCAGTAGCAGGAGTTTGAGCAACCATTTGTAACTTAAAAGCTTTCATGCGGCTAGAAACAAATCCAGTTATACAATTACAGATGTAGGGAGCAAACAGTAAAAACAAAACATTTAGAATCAAAATTAAAAGTCACATTATGTCCATAGTTAAAGTGCAAAGTGTTGCACCAGTCCATTTTAGGGTTGGTAGATGTCATCAGATGAAGAAGAGGCATCGCATGTGATTGTTGTCGAAGGTATTCACAGACTTGGAGAAAGTCTTTTCCTTGAAGTGGGGATGTCCACCACAGGAAGCCTTCCACTGATGAAGAGGGGAATGCTCTGCAGACCCAGCAGTTAGACTGATTGTGGAATGCAGCATAGGAGTGAGCCCAGGACAGGAAGACATTGCCTTGAGGATCCAACGGCAGACTCAGGATTTTTGGAGTCAGAAGTAGACTCACATAGATTATCAGGCCCATCCGCTGCCCTTTGTTTAACTCTAGAGCTCGGGTCAGGGCCACAAGCTCCGCTAACTGAGCACTGGTTCCCTGGGGGAGAGATTTTGCTTTCAAAACCTGTTCAGCAGTCACCACGGCGTAACCTGCTTTACGCTTTCCATCCCGAACAAAAGAACTGCCATCTGTAAATATTTCCATGTCAGGATTGTCTAATGGGATATCCTTTAGATCCTCCCGAGCTGCATAGTTTAAAGTTAGGAATTGAGAACAATCGTGATCAGGTGTTTCATTTTCCTTCTCAGGAAGGAAAGTGGCAGGATTTAAATTTCCACAAACTTTAAGCTTAGTTACTGGTCCTTCTAACAATGACTGATACTTAAGAAGCCTACTGTCTGTCATCCAAATATTAACCTTAGAATTTAATATTCCACTCACATCATGAGAAGTCAGTACAGTAAGGTTTCGTCCATTAATTATTTTTAAAGCTTCAGGTGCTAATAAAGCCACTGCCCCAATTACTCTTAGGCAGTGGGGCCACCCACAGGAAACTACATCTAATTTTCTGCTTAGATAAGCAATAGGTTGCTGGTGAGGCCCTCGGGGTTGTGTCAAAACTCCCAATGCCACACCTTTTCTTTCAGTGACAAACAAATTAAATTCTGACCCTGTGGGCAAGCTCAGAGCTGGAGCTTGCAGTCTGAAGAACCTTAAAAGCCTTTTGAGTTTCTGGAGACCAAACCAGTTTGTTGGTTTGGGCCTGCTGAGTTTCAGCTATAAGTTTATATAAAGGCCGGGCAAGTTCTCCGTAACCCGGAATCCAAATGCGACAGTAACCTGTGATTCCCAAAAATCTTCTCAATTGTCTTAAAGTCATAGGTAGGGGGTGATTTAGTATAGGTTTAATTTTCTCAGGGCCTATGGCCCTAGTCCCTTCTGATATGATTAGGCCCAGATATCTAACCGATTGTTGACAAAGCTGAGCCTTTTCTCTTGATGCCTTGTAACCACAGCCTGCCAGAAAGTTTAAGAAATCTTCTGAGGCTCGCGAACAAGCTTCCTCTGTCTCAGCATGGAGCAAAATATCATCTACATATTGTAACACCACTGCTTCAGAGCTATTAAAGTTTTGTAAATCCCGTGACAAACTTTGTCCAAATAAGTGAGGACTGTCACGAAATCCCTGGGGCAAAACTGTCCAGGTTAACTGAGAAGCTGGCTGCGTAGGGTCTTCAAAGGCAAATAGGAATTGACTTTCTTCCGCCAAAGGCACTGAATAGAAGGCATTCTTTAAATCAATTACTGAGAAATATTTGTCCCGTTCAGGAATTTCAGACAATAGAGTATAAGGATTAGGCACCACGGGGTGTAAAGGAACTACAGCCTCATTTATTATTCGTAAATCTTGAACTAGTCTCCATTTACCATTCGATTTCTTTATACCCAAAATAGGAGTGTTGCAAGGACTGTTACAGGGAATTAATAGTCCCTGCTCCTTTAAATTTTCGATGATGGGTTTTAACCCTTCTTTAACTTCAGGTTTCAGTGGATACTGCTTCTTATGTGGAAATACGTGTGGGTCTTTGAGCTTAACAACTACAGGAATAGCATTTTGTGTTCGACCCACAGATTTTTCATCAGCCCATACTCTAGGATTTACATTTTGTTTAACTAAAGGGAGAGAAAGGGAGGGCTCCATATTTATGAAAACAGAGGCATGGACCTTGCTCAGTATATCCCTTCCCAAAAGGGGTGAAGGAGATTCTGGCACAATCAGAAACTCGTGTGAAAACAGCACAGAATCCCAGTTGCAAGATAAAGAATAACTGAAATAATATCTTTTGGCTCATCCAGACAGTCCCATTACGGAAGCGGATCGGGAAGAAAGTGGGCCAGGGGCTTCAGTAAGCACAGAATAAGTTGCCCCAGTATCTAAAAGGAAATCGACGGATTGGCCCCCCACAATTATTAATACCCGGGGTTCCTCAGGTGTAATTAGGACGGGAGCTTGTGTGGGGACCCCCGGGCACCTTCAGTCCTGATTGTCTTGAGAGTCCGACCCCGGAGACCTACGCCTCTGGGGACAGTCTCTCTTCCAGTGTGGTCCTTTGCAGACTGGACATGGAGCCGGGGGCGGCTTAGATGCCTGAGGGCAATCACGCTTGAGGTGCCCCTCCTTTCCACAGTAGTAGCAAGCCCATCCCTTTTCACCTGGGCCCCTCAGGCTGTTTAAGAACGTTTTTCATAGCCATGGCGAAGGCTTCCGCCTTTTCTTTATCTTTTTTTGCCTTTCTTTCTTTTCCTCATATTCCCTACCATAAGAGACTGTCTGAGCCAGTTGTAACAGAGTATCTAAAGACTGATTTGGTCCATACGCCTGTTTTAATAGCTTACGGCGGATATCTGGAGCCGACTGAGAAATCTATCCTTTAAGATCACTTTTCCCTCTTCACTTTCAGGATCAATCTCAGTGAATCTGTGAAGGCCTTCTCTCAGTCTATCTAGGAATTTACCAGGAGCTTCCTTCTCCTCCTGTTCTATGTCTGCCAATTTGCCATAGTTTAAAGGCTTGGAACGCGCCCGCCTAAGTCCCTCAAGAATACATCTAACAAAACGACTCTGATCCCATCTTCCTTTAACTGTGTTGTAGTCCCAGTCTGGTTCTGTAGTTGGGACCGCCTGATTCCCAGTGGGGAGGGCCGCTATCTCGTTCTCCCTCTTCCCTACTGATTCGTTACCAGGCCACTCATCTCCATAAGCAACCGCTTTTCCCAAAACTCGAGTCTTTGACTCAGGAGTCAGCGTTTGTCCCAAGATATACATCACATCCTTCCAAGTGAGGTCATAAAGCAGAGTAACACCTTTAAAAGCTCTGATATATTTTTCTGGGTCCTCTAAATAGTCTCCCAGATCCTCCTTGATTCTTTGTATTTCTTGATAAGAAAAAGGCTTATTAACTCTCACAGACTGATTATTTCTCCCGGTGGGTGTTTTCATAAAGAGGCAACAGCTTGTGTGGCTGTTCCTCAGTCTCTCTGGCTGCTCTGCGCATATGATCCCAGGGATAGGTTGGAGAAACCTGTTTCTCCTCTTCTCTTTGTCTCCTGTCCTCCATCTCATCGCTTACTTCGATGGTCTGAGTTTCTACTGAAACCAGAGTAGTCTGAGGTCGTACTGAGACAGGAGTTGTTTGGACCTCCATGTGGGCAGTTTGAATCTCAGTTTGGATTTCCAGTTATGGGGGCAAAGTAAGAGGACAGGAGGGAGCTGAAGGTTTCACGCCCAAATCTATACCCTTAGGACATAAGTCTGGCATATTTCGCAGAGAGAAAAAGGGCAACACATATGCTACTTCTACCCATTTCCCTTGTTCCTTACAGAACCGGTCTAATTGCAGAACAGTATTATACTTAAGAGACCCTCCAACTGGCCACCGTTCGCCGTCCTCCAATGGATACCGTGGCCATGCAGTATCACATAGGAAGACCAGGTGTGTCTTCTTTAAGCCCTGGGGATCAAATCTATCCCAGTTTTCAGGATACAGTTCAAAGGAGTGAGGCTGGAATTGTTAGCTCCCATTTGTAAGAGAGAAAAAAAGCGACCAGCGCCATTTTTTCTACCGGAGGCGTCCCTCCCTGCTCTAGATGGGGGTGTAGACAGACGTTACACCAAAAGCTTTTCCTTCCTGGTCGGACTTAGTCTGTCCCTTACCGACGCAGGCACCGTACTCGTCCCTCCCGGTTCTACCACCGAGATGGGGTAGGGATGTACCAGGGGTAGACTTGATAGCATCCCTACTTGACGTCCAGCTCTTCACCCTTAACCTTGCTTGCCTCTGATGTCACCCGGGGTGAATCAGAGTAACCTCCCGGAATGCCTCCCAAGCTAAGACCATTGTGGGAAACATTTATCACCTGAGTGCCTGTGCACGACCCTGAGTATTTCCTGAGTACAATAAGACCAACACAAACATAAAACTGAGATGTTCTTTCCAAGCATGACCACACCAGTATAACAGCCTCTTCTGATCCACTAAGAGCCGGCGTTACCAAAGAAAAAAAAAAAAACCCATCGCAGTCCCAATCTGAGTAACCTTTAACCTCAGAGATGTTCTGGGAGCTAGAGCTCCATCTAGCTTACGAACTTTCGATTCCTAGCGAGGCTAGACACTTTCTTGACTACCAATTCAAGTTTGGGACCTAAGCCACAGTACACAGTAACAGTATAGATCACAAGTCCCTTGAAAGTCTATGATCCGATAGATTAGGTTAGTACTTCTAATTTCCAAGGAGTTATGAAATGGTCAAAGAGACCGAAAAGTTTGACCGAGAAAGGAGAGTTCGGTCCACACGCTTTGCCCATTTCTGGTCGGTTCCCGAAGGAGACACTGGGTGCCTCTTGGCATTGGCAGGTCGGTATAACGCCCCGACAGGTTTCTGCCATGAGCCGTATGAGATCACCGTGGAACCACAGAGCAGGGCTCCTTACTTGTTTCACGCAGGGCATGCCATTCATTCACACAAGCACACCATAGAGTTACTAAAGCACAGCAGAAAATGTGTTCACTAAGAGAACAAAGAACTAAAGCTCCAAGCATCCTTACCTTGTCCTGAAGACTCCCGGACGAGCCCCCAAGATGAAAGGTTGTTGTTGAATCACGCGAATACACCGGGATTCTTGGCCCCCGGAGGAGAAGAATTCAATCCGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAGTAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAACAATGAGGTTATATACTCTCTAGTGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCATCAGACCTACTCCCGTAATTTACATTTTAAGATAACACTGTCCTCAGGCAAGATACATCCTTGTAAAGACCAGGTCTACTTCCATAATTAACATTTTAAAGTAACAGAAGGTTGAATCCAAAGACTGTCCTTAGGCAGGATACATTATTGGTATATAATCCTAAGGAATGTGGAGAAAGAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCTTTGGGGACCCCTAGACTCCCTATCAACCTGCCTAGGAAATGACTCTCTCA TCONS_00120291 . 5' 14654 TCONS_00120291 . 5' 14654 EMBV3_34694 CAGGGTCCAGGTGAGGGTTCCCAGGCATTTCAAACCTTAGCATCACTATCCATAGGCTGA Gene GeneID:506911|RAB19:NM_001035040:592_cdna UTR3_Alt 1 NULL GeneID:506911 4 GENE RAB19 MGC128355 RAB19, member RAS oncogene family EMBV3_04150 CTGGGGAGAAAACCTATGAAGTAAGTGTGGGAAATGTCTCTCTAAGAAGTGCCACCTCAC Gene GeneID:100298923|LOC100298923:XR_083738:10_cdna Constitutive 0 NULL GeneID:100298923 8 PSEUDO LOC100298923 NULL similar to zinc finger protein ZFP EMBV3_19793 TCCAATGCATGAGGAGCCCTCTTTCCTCCGCTCAGAGATGCTGCTTCATTTGTCTAGGAG Gene BVV0102_330940 + 0 NULL GK000019.2:43394561-43395928 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32396 CTACCACTGCTTTTGTGATCATTTGGCTCTAGTTCAAGCCTCCTGCTCTGACACAACCCC Gene GeneID:530824|LOC530824:XM_002693465:52_cdna Constitutive 0 NULL GeneID:530824 15 GENE LOC530824 NULL similar to olfactory receptor Olr35 EMBV3_39343 TATGGCCCTTCCCAACCGGCCAGCCCGGCGAGCTGCCCGCCGTGCTCACCCTCTATGTTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43259 CATAGATGCCCTGAGTCCTAATGACTACTCTTCCCATGGCCTTCTCCACTACTGCTCTGT Gene BVT0102_117711 + 1 EMBV3_34932 GK000003.2:6995684-7105559 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08409 ACCCTTCACGTCAGTGTGTGCGGTTGTACAATCCTCCAGCCCTATAAAGGCGGTGACCTT Gene GeneID:100298364|LOC100298364:XM_002698640:20_cdna Constitutive 0 NULL GeneID:100298364 27 GENE LOC100298364 NULL similar to defensin, beta 1 preproprotein EMBV3_14501 TTCTTGCCCTTCTGCTCTTGCTACTTATACCACTTCTGCTGCTGGTGTGCCATTGTGGAA Gene GeneID:508151|DSG2:XM_002697712:33_cdna UTR3_Alt 2 NULL GeneID:508151 24 GENE DSG2 NULL desmoglein 2 EMBV3_25651 GACCACTTCCGAGAGCGTGAGATTTTGCATATTGCATTTGCCAGAAGAGGCTTAGTGGGC Gene BVV0102_012081 + 0 NULL GK000018.2:24282457-24290722 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082613 TCONS_00082616 TCONS_00082612 TCONS_00082617 TCONS_00082614 1 XLOC_051061 Coding TCONS_00082616 XLOC_051061 Coding Coding NUDT21 18:24267785-24285824 j TSS62280 4289 1 TCONS_00082616_2 160 6 0.76255682448165 0.00147183015938374 1.98938313511855e-05 0.000482650076981105 5.49863063135952e-06 0.00229424382984324 4.37803812999066e-08 3.30128656734136e-07 1.26706699811378e-20 0.00407228975095127 1.18440434510094e-08 3.42941878880802e-20 1.61039483807535e-11 0.000248513492043158 0.000942471638771841 1.60680581561927e-06 0.000656422265018738 0.00252641806819645 7.59161536735761e-07 0.00226637336151301 0.00236721395428655 1.68915580394965e-14 0.00134298501472607 0.00108573540159718 0.00287432613097806 0.00124875050271852 0.0017864748054621 1.2763705076412e-09 0.000143064740201355 1.90924761320362e-19 0.000888500985672102 NM_001035331.2 NUDT21 Bos taurus nudix (nucleoside diphosphate linked moiety X)-type motif 21 (NUDT21), mRNA. 0.0 1119 99.37 0.146654231755654 NM_007006.2 NUDT21 Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 21 (NUDT21), mRNA. 0.0 2107 72.08 0.928654698064817 TCONS_00082616_2 sp|Q9CQF3|CPSF5_MOUSE CPSF5_MOUSE Cleavage and polyadenylation specificity factor subunit 5; 1e-85 255 98.39 0.76875 1 coding 1 0 1 0 -2.41023596578863 0.0316803555975242 -0.0474695484454322 0.484837614410557 CTTTCTACTTCCTGCCGCCAGAGGCTCCGGGTGCACTTCCGGCGTCCGTATGCCTCCTTCGGCGTTCTCTTGTTAATGGCCGCCGGCGGCTGCTGACTGGGACGCAGACAACCGCTGCTCACACAGGGAAAGTCTCCCTGCCTCCCGTTTTCCGCTCGCTGCTAGTGCCGGAGCTCTCCAGCATGTCCGTGGTGCCGCCCAATCGCTCGCAGACCGGCTGGCCCCGGGGAGTCACCCAGTTCGGCAACAAGTATATCCAGCAGACCAAGCCCCTCACCCTGGAGCGCACCATCAACCTACCTGGTGGTGAGCTTAATCCAGGAGAAGATGAAGTTGAAGGACTAAAACGCTTAATGACAGAGATATTGGGTCGTCAAGATGGAGTCCTGCAAGACTGGGTTATCGATGACTGCATTGGCAACTGGTGGAGACCAAATTTTGAGCCTCCTCAGTATCCATATATTCCTGCACATATTACAAAACCTAAGGAACATAAGAAGTTGTTTCTGGTTCAGCTTCAAGAGAAAGCCTTGTTTGCAGTCCCTAAAAATTACAAGCTGGTAGCTGCACCGCTATTTGAACTGTATGACAATGCACCTGGATATGGACCCATCATTTCTAGTCTCCCCCAGCTTTTGAGCAGGTTCAATTTTATATACAACTGAGTTGCTGCACAGCAGAGAAGTAAGAGAAGCCGTCTCTGTGAGCACAACTATACACAGTGTAGAATAAACGTCCCTGAAGTTTTTTTGATGTTATCTCTTTCCCAGTCCTGAAATTAGCACCTGCTTTCTATTGTCTGAATAGTAAAGTTAATATGAAAAGCTAGATTGTGCTGTAAACAAATGTGATATTGTTTAGTTTACTTTTGGTTCTACACAAATATTTTTTGTACAACATTAAAGAAAGTGGACTTCTTTCTATTTGTTTTTTTGTTGTTGTTTTGTTTTTTAATTTCACATTAAACTTGTAAAATTCTTACAGGTGAGGATTCCTTTTCCCCAACTAGACAGGTGAATGTTAAGATATAATGGCTGATTAAGGTCAGTCAAGCCTTAAGCAAAGGCTTAAGTGGGACTCTTTGCTCTGATACCATTCTTGGGGGTATACTCCCAAGACCATGTTGTAGATTTTTGTGATGAGGATTGTCTGTTACTTTGGGGAACTGCATTTGCTTGATTGAATCCAAGGTGCAACTGCTATACCAATTTTACACTCTCTACGAGTTATATCACAGCAGAACTCCAAGTGTATTATTGATGAGTACATTTTATACCAGCGTAGCTAGACCTTATTTCACAAGCAACAGACGTTAACCATACAGGAAACTGTTAAGATTGACCTGGGAGTTGGTATAAAAAGAGGTCCAGGGCTCAATTAAACACCCCCCCCTCCCCAATAAGGGAAGTATTCATTATCTGTGCTCTTGTGAAATTATGTGTCTTAATTATTTTTATGGCTGTGGTGAAATGGTGATCTGTGAAGGAAGTTTCTAAAAGTGGGTCTGTTAGGTTTTGAACTCTTGGATTATAAAGTTTGTTATTTCAATTAATGTGGAGTTATAGCCAATGAGATGAAAGTTTGGTTTTAAAAAGTGACATAAAGCCTTTTCAAAAATATTTTGGAATAATCAGAATTAGATTTTGTCAGCCTAAGAGAAAAATACCAAATTTAAGAATCCTAAAAGCATAGTTAAATTAGGATCAAATTTGAGGGAATAAAAAAAATTCTTAAGGCAAAAGAATTGGCCTTGTTATTTCTTAATAGTACATTGTGTATGCCTTATTATAAACGGTTGATTGTAGGTTTAATGTAAAGGAAGTCTTATAAGATGCAGCTACTAAAATAGATTGCTAGTTATGTTTTTCATAGATAGAAATGAACTTTTGGTTAGTTGTGCATCTTTATGGTACTGATGACAGAGCTAGTCTCCTAAATATTGGGTGACGTGAAAGATACATCGTATATTCTTCCTATTTAGGCTTGAGAAAAGGAGACCGAGAGCAACTGAGCAATTTTAAACATTCAACTAGGTGAGGTCCTAAGAAACCTTCACACGGTTGTGAATCTAATAGTGGCTATAACTGTGCCTACTAATAGGTGAGCATCTGTCTCCCGGACCAAAAATGACCAGGGATCGCCTTTGAAAGAGCCTGTTTCTATGGATAGTCCCCCTCCTTCAAGTGTAACAGTTCTGCTGTTCTGCTTCACATTCACATGTTTCTAGCTAACTGTAATTTTACTGTTGAGCTCACTGATGCATCCTACAAGATTGGGGAAGGCAGAGATGGACATGGCTCAGTCTCCAGCCTACCTTCCATAATTGTTTCTGGCCTCCAATTGGAAAGCTATGGTGACCACTTTGAGGTGTGTTAGCTCATGCCCTTTGGGGAAGGTGAAGAGAGGCAGACTTTTTTGTGGTGTGATTTGAAGTGTTGTCAGTAAGGAGTGTTAGAGTTGAAATGTCATCCGATTCGAGGCCACTCATGTTCTTTTGTAACTCAAGCTTTGACCTAGAAATCCTTTCTTGATCATTACTTCCAGTAATATAAGTGCTTGAGTCATCCATACTTTGGGGCTTACGTGAGAAAAATGGTAAGCTGGAGTTACTAACCTGGAATATATAAGATCTGATTTTGAGTTAAAATTCATAATTCAAACACATTTTAAAACTTGTTTTTGAACTTGTTATAGTTGTATCCCAGTGCTCTCGTTAGGTTTCCTGATGAAAATAGAACTGGGGAAGTTCAAATTTGATGTAGTCCATTAGAAAGAGGGTACAGGGTACTGTTTAATTAACACTTTGATATGTAAGTTCTTATCATTTCTTCAAGAACTAACAGTCTTAAAATGTTCATTCCAATTCTTTACATAATCAATACTGACTAGTTTTAAATGACTTATATGTTTGAATGCCTTGTTTTCCAGGTTTGTTTGTAAATGAAAGCCTTCTTTGGCATTGTATAATTACAATATATGTCATGATCTTTTCCCTGAGTAAGTAGTGCATATCCTATATAAAACTACTAAATGGCATTGGAAAGTATTCAATAGATTGAGGGGAAAAAAATAAAGTTTTACTCAAATGTTATAAATCATATTTAGGATTGACATCCCTTTGAAGAAAAGCGAAATTTGTGTTTTTTTCTATGTGATGAAGACATGGTTTTTTTAATAAGTGGATGATACTTAAAATAGCATAATGACAATTCTGTGTTTGAATCCATCTTTTGACAACAGTTAAAAGATTTTTTTACTTTTTATTGTTGTCTTCCCTTGTAATTATTACAGCATTTTGTGTTGCAGTAATTCCTTTTTTATGTTTAAGGGTTTTGTTGAATTAGTATTTTATTTGGATCAAACATAACCAAACTAGTCAGTCTGTTTTCTTATATGTTTAGTCAGAAGTGAGAGGTGGAGTTGCTCAGATTCAGCAAACCAGCTAGTCATTCACTTAAAATTCCCTTAAATAGTGTGACTCTTATGCTTTCAGTTTTTTAATGCCTCTTCTTTAAAGTACCTGCTTAGTCACTTGAGACGAAATGCTTGGAGTACCTTTTCCTCCTTGGAGTTCCTCTTCCTCCTTGGAGTTCCTCAAACTTGATGTTTTCACTCATTCATAGTGTTTGGAACAGTTTATGCCCCTCAGTAAGACCACTTCCGAGAGCGTGAGATTTTGCATATTGCATTTGCCAGAAGAGGCTTAGTGGGCTTTGACTTTGATATGGGTCAGCTTTTATAAGTGTAAGGTTCAGCTTCCCATAATTACTCCACATGTTTTACATCACTCATTATTTGGGTTAAACTGGACTCATTTGAAGCTATTTGCTTTTGTTAAATACATAATGCAAAGCATAATACTATAATTTGACTTGAGCCATAAAACACACTTTAATATTAGCTTGTATTGTATTTATCTAGCTTGTTTTGGGGAAAAAGAAAACTAAAACCTAAGTCTAGATTAAGCCAGTTAAGATGTAATTGTATTTTAGTGTTGGATTGTATTGTGAGACTAGAGTTAAGTTGGGAAAATGTATCATGTTCTGTTAAGGGAAAGATCAGTGCTTTAAAAACTTAAACTTTGGTTGCTGTGTTCACATCACAGTGTACAAGAATCATTTATAGTTTGGCTTTGAGAATTATTCTGGCGTTAGGTTTATAGAAAAATGTATAAAAGAAACTGAAGTTTTGGTTATATTTTTATAATTGTAAAGGTAAAGTTTGATTAAAATGTTCACTGTTCTTATTTTATTTTATTGTCATTTCAATAAAAAAATTAAAACAGAATG EMBV3_10601 TGTTTTCTATTCCTTTACTGTTACCGCCCCACCTCCATCACCAAAGCCAAGTAGGGTCTC Gene GeneID:789523|LOC789523:XM_002692581:295_cdna Constitutive 0 NULL GeneID:789523 14 GENE LOC789523 NULL similar to kinesin family member C2 EMBV3_08589 GTCTCCAGCGAGGGCCTGCATTTGGATCACTGAGGATGAACCATTGAGACAACAAAAAGG Gene GeneID:511961|PRKAG3:NM_001030302:80_cdna Constitutive 0 NULL GeneID:511961 2 GENE PRKAG3 NULL protein kinase, AMP-activated, gamma 3 non-catalytic subunit EMBV3_08509 TGCAGGATTACTGGAACCCAGATCACAGCCCGAATACGTGGGGAAACACACTGGTTGATC Gene GeneID:100297006|LOC100297006:XM_002684739:174_cdna Constitutive 0 NULL GeneID:100297006 1 GENE LOC100297006 NULL hypothetical protein LOC100297006 EMBV3_22708 GTCTTCTACTGCCCTACAGCTACAGAGCAGTTTTTGTGGTTCTTGGAACTTGTATTGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18561 AAGATGCCCCTGAGAGGTTCCGTGGTCTCGGTGTACGAATTGAGGATGATGTGGTGGTGA Gene GeneID:539202|XPNPEP3:XM_002687941:14_cdna Constitutive 0 NULL GeneID:539202 5 GENE XPNPEP3 NULL X-prolyl aminopeptidase (aminopeptidase P) 3, putative EMBV3_34743 TCTCTGGAACTCCAACTGCGTGGCCTGCGGGGTGACTCTGGAGGACCCCTCAACTGCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09942 GCTTCTGAACTAAGATTGGGTAGAACTAGGAGGAGAGAAAGGGAGTGTAGAGAGGGGTGC Gene BVV0101_013940 + 0 NULL GK000012.2:86841255-87063498 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36205 CTGGAGTCAAGAGGAGCCTCAGAACATGGGTCCTTGGTTTTTTGTTTCTCCAAGGTTTGA Gene GeneID:517113|DHTKD1:XM_002692049:33_cdna UTR3_Alt 2 NULL GeneID:517113 13 GENE DHTKD1 NULL dehydrogenase E1 and transketolase domain containing 1 EMBV3_41701 AACGTGCTAGTAATCCCGAAAACCAGACAATGTTCTTCCTGAAGGTGAGTGGGCTGCTCC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30778 CAGAACAAGATGAAGGCACCAGGGCTAGTTAATTCCTTGTGAGGCAGGACCAGCACTTCT Gene GeneID:516545|C13H20ORF108:NM_001080278:1099_cdna UTR3_Alt 1 NULL GeneID:516545 13 GENE C13H20ORF108 MGC151880 chromosome 20 open reading frame 108 ortholog EMBV3_29269 AGCCGGCGGCCCCGAGCGGCCCGGGGACGTGGGCCTGCGAAGCGTCCTTGGCGTGCTCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28548 TCCCTATGGCTTCCCTTCTTTTCCTGGTTCTTATCTTGAGTGTCGATCTCGGAGCTGCCA Gene GeneID:508387|CCL26:XM_002698193:729_cdna Constitutive 0 NULL GeneID:508387 25 GENE CCL26 NULL chemokine (C-C motif) ligand 26 EMBV3_25020 AGACTCTCCCTCAGAACCCCTGGACGGGAGCACAGCCTACAGATAACCTTGATTTCATCT Gene BVT0102_432880 + 0 NULL GK000029.2:42876692-42882592 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38716 TCGGGTCTCTCGTTTGCACCGCGAAGACACCTCTACTGCAAAGATGGTCAACGTACCTAA Gene GeneID:787089|RPL36A:XM_002691236:96_cdna Constitutive 0 NULL GeneID:787089 11 GENE RPL36A NULL ribosomal protein L36a EMBV3_03727 AGATCGCGGATTCAAGTGTGGCTTTATGAGCAGGTGAATATGTGGACAGAGGGCTGTACC Gene GeneID:100294963|LOC100294963:XM_002683816:50_cdna Constitutive 0 NULL GeneID:100294963 25 GENE LOC100294963 NULL similar to small nuclear ribonucleoprotein polypeptide E EMBV3_16998 TTCCCTCCTGACGTGTATTGTGGTAGTCTGAACGCCCCCAGAAAATTGTGCCAAAGAGTT Gene BVV0101_071552 + 0 NULL GK000018.2:32209061-32798823 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00089576 1 XLOC_054360 NonCoding TCONS_00089576 XLOC_054360 NonCoding NonCoding - 18:32382079-32382977 - TSS66922 898 1 TCONS_00089576_1 37 1 0 9.09066979209765e-05 0.000296529662235482 0.00110951788222073 0.000527101031751824 0.000177768496373 4.97919422409059e-05 0.000230541410535399 0.000438005796672619 0.000468604051795904 0.000339056309242971 6.75537790103479e-05 0.000157282217654914 6.65666126202745e-05 0.000111750437024064 8.10417344955387e-05 0.0102793539485204 0.00176869260180461 0.00475926014812209 0.00112594871528421 0.0012933370908023 0.0019049408173663 0.00394928551066791 0.00540941792037675 0.00871212925833875 0.00275312893441328 0.00133377397867819 0.000650292059927616 0.002114279994747 0.000646919665152233 0.000653893140792394 XR_228719.1 LOC100848872 PREDICTED: Bos taurus uncharacterized LOC100848872 (LOC100848872), 5e-42 176 100.00 0.106904231625835 XM_005257341.1 KPNB1 PREDICTED: Homo sapiens karyopherin (importin) beta 1 (KPNB1), 0.0 998 84.27 0.974387527839644 0 noncoding 0 0 0 0 -2.11216444760552 0.00483618126964947 -0.122874214694557 0.0722595515126823 TATTTTATTTTTTTTTTAATGTTTTGACACCATTTTATTAATCTTCAACTTCAGTGGAAAAATATAACCTTTTCAAGTGCCATTTTCATCACAAGAGTTCTAATGTATATATGTGTGTGTGTATATATACACACACACACATATGTATTCTTTTGATCACTTGGTTTTGATGTGCAGCAAGAGACCAATACCTCATTATAATCAATCAAATAAATGAGAACAGAAGGCCAAGCAGTTTCCAAATGGTTATTTTATCAGATTGTTTATAAACATTAAATTTATCCTTGTTTGCAATCCAAAATAGTTACCTGAAGTTTGCTGTTTGTATGTGTTTTGTTTTTAGTCTGTTTTCTAAACTCTTTGGCACAATTTTCTGGGGGCGTTCAGACTACCACAATACACGTCAGGAGGGAACTTTTCTTTTGTGCTGCCAATTCTGAGTATTTAAATTTTGGTTTGTTTGGGTTGTGGCTTTCTTTTGAAGTCTGCATTCTTTATTTGTAACAATGTATTTTTATTTTTTCTATATCCTCTAACTCCAGAGTTTGTTTTTTCTCCCCCCACCCCCCCCCCCACTTCTACATTCACAGTTGAACCATATTATTAGGAAAGGCGCCTTGATGAAAAGATCAGGATGGGAGCTCTGACCATTCGTCAGTGTTTTCCCTAAAATTAAAAAAAAAGAAAAAGAAAAAACCCAAAAAACAAAACCTAAAGAGCGTCTTTCCTTTTTTTTTCTTCTCTTACATCTCTTGTGCTGCATCAGTAGACCGAACTTCAGTTAGTTTTATGAAATGCAACATCTAACCCCTTTTTTTTTTCTGGGAAAAGAGAAACTGCAATGACTTGAAGTTGAGAATGTGGATACCGCCTCATTCACACACACTCATTCTCAGAC TCONS_00085933 TCONS_00085934 . 3' 415847 TCONS_00085933 TCONS_00085934 . 3' 416744 EMBV3_28330 TTTCTACATCTTCAATTTCCTCAAGTACACCCTCTGGCCATGCCTGGTCCTGGCCCTCGT Gene GeneID:369023|G6PC3:NM_183364:203_cdna Constitutive 1 NULL GeneID:369023 19 GENE G6PC3 MGC140735 glucose 6 phosphatase, catalytic, 3 EMBV3_28307 TCATTGTTCATGCCCGCCGTCTCTGGTGTGCGCAATGACCTCCATCTCTTCTCAGAAACA Gene GeneID:100335479|LOC100335479:XM_002707704:3_cdna Constitutive 0 NULL GeneID:100335479 Un GENE LOC100335479 NULL leukocyte immunoglobulin-like receptor B2-like EMBV3_35766 GTTGGCTTAGTGTGGTTGGGTTAAGCATGACATTTCTTCCTCTGTTTCTCCCCATTCTTG Gene GeneID:100298905|LOC100298905:XM_002688198:56_cdna Constitutive 0 NULL GeneID:100298905 6 GENE LOC100298905 NULL hypothetical protein LOC100298905 EMBV3_29955 GCGACTTGCCCCAGCTCAACCCCAGAGCGGGAGCTGTTGGCCAGAGGAAGTGGCTGGGCC Variant GeneID:515620|TJAP1:XM_002697255:467_cdna 146^275 1 EMBV3_25993 GeneID:515620 23 GENE TJAP1 NULL tight junction associated protein 1 (peripheral) EMBV3_18227 GTGCCATTCAGGACCACAGTGTTCTCGGAGGAGAAGATGACGCCCACCTTCCAGCTGGGA Variant GeneID:280964|ZP3:NM_173974:29_cdna 528^575 2 EMBV3_31275 GeneID:280964 25 GENE ZP3 NULL zona pellucida glycoprotein 3 (sperm receptor) EMBV3_40944 TGCTTTGGTGCCCATGCTTTTGGTGTCATATCCAGGAAAGCACTGCTGAAACCACTGTCG Gene BVT0102_255405 + 1 EMBV3_40824 GK000005.2:44133098-44195412 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09574 ACAAGTGCCTTTAGTTGAAGCACATCTCTCTCATCCCTCTCTTCATTACCTGACATGCGC Gene GeneID:523485|MYO1E:XM_002690853:202_cdna Constitutive 0 NULL GeneID:523485 10 GENE MYO1E NULL myosin IE EMBV3_37900 CAGCATGTGCTGGCTGGACTTCAGCCCAATATTTAGTGGCCTAGATGCGAAAGAAAAGCC Gene BVT0102_218642 - 1 EMBV3_27286 GK000025.2:26134743-26145405 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00146572 TCONS_00146570 TCONS_00144838 TCONS_00146571 2 XLOC_089142 XLOC_088665 Coding TCONS_00144838 XLOC_088665 NonCoding NonCoding NFATC2IP 25:26143481-26145489 x TSS108661 1909 4 TCONS_00144838_5 65 0.375065479308539 2 0.0498256103637269 1.80760786937291e-11 8.03191863209265e-05 0.000720132815412747 0.000227466903828795 0.000765538591963303 0.000611838257435419 0.000319419631988477 6.28883080955656e-13 0.000103483907791304 0.00047239795467647 3.17444931725694e-15 0.000200770709648213 0.000299178301565876 6.23269462511042e-07 0.000469594049145783 0.00264057167076138 1.79864804391213e-32 0.000869259757968639 0.00016386878219651 0.000967361407494341 0.000511501493897798 0.00128364938346899 0.000764611803876618 0.00461242222729395 0.00114655831058258 0.000899599846815266 0.000909729080160954 0.000345452141680918 0.000210593605944371 0.000928841204934574 NM_001098883.2 NFATC2IP Bos taurus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (NFATC2IP), mRNA. 7e-32 143 97.62 0.0434782608695652 NM_032815.3 NFATC2IP Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (NFATC2IP), mRNA. 2e-69 268 65.00 0.696699842849659 0 noncoding ACAAGTTTAATGTATTCCTGTTTATTCTGTTGACACTGAACATATCATTTTAATGTATTCAGACTTATTAATGGATATATCTTACCTGAAAAAAATGAGCTATACCATATCATGGATTATTTAAATATTAAAAATTTTCTTTCTATATTTCCCACATTATAAGTTCAAACGAATGCTACATTCCAACAACAAGAAAAAAACTTTTTAAAGAGAGTGATGTGCTTTTGCCAAAATCATACCACATATCAGGTGGAAAATTCATGGCTTTATTAGTAGATGGCAGAGAAAACTGGCTCATTATACAGTGAAACTAAAACTTGGATCTCATAGACAAAGGTGAATTTTAAATAGTTTAAAAGTACTATTCAACATTTCAGCCTGGCATCAAGCAATGAAAACAAATATTTGACCACGCAGGGCAGATGTCAGCCAGTACACACACCAGCATGTACTGGCTGGACTTCAGCCCAATATTTAGTGGCCTAGATGTGAAAGAAAAGCCAATAAAACTAATAGAAGAAACTGCAAAGTATTGTTAACTATTTTTAAAAACACAAGTGCCATCTTCAGAGTTTTTCCAACTTCCCAGGAATATAGGAGGAACTTTTGAGAGTAAACAAAAAAAAAAATGGTAAGAAGCCCCCATGAGAAAAGGAACAAAGATAAATTAGCAATTCACAAAAAGGGGCACCAGAAAGGCTGACAGGAAAATGAAGAAATTCCTCAAATTACTGGTGACCAGATGAATGTACATTAAAACAGGGCACCACTTTCTACCCAAGAGACTGGCAAAAGTTAGAAAGTTGGGCAGTAATAAATGCTGGTGGGGATGAGCAGAAATAGGAAGCTTTAAGTGGGAGAGTCAAAGACCATTCTAAAAAAACAATAGAGAAATTAATCTGTCTGATGCATAATTCCATCCTGGGTACCTCTGCTGGAGAACTTTACATAAGTATGGAAGGAGACATAGAAAAAGATGTTCACCATGACCATGGCCTTGCCTGTGGGCCGAGGAGTTGCAGGTAACCCAGGTGTCTACCACTTAGCAAATGTCTAAAAAAAATGCACTTAACACCCACCATGGAATATCTTGGAGCAGCTCAAAGAAATAAAGCTGATGTAGCCTAAGCAACCCATGTTGAGTGAGAAAAGCAGCAGGGCAAGATCAACGGGATTATATTACATGTGGGCAAAGTATATGCACACAGACAGCAGAGCATGTTCAAGGAAACATTCATATTCAAAGACATGGAGTCAACACACTAGAACGGATGCTTACAGGAGAGGATGACATGAAGGGAAAAAGCCATAAACCCTGTGTGGACTGCGATCCTGAGATCAAAACCAAAAGGTTCAAGGTGCTCAATTATGCTTTAAACAACACGTGTGCATCAGGAAGGTGGCTCAAAAGGGTCCTAGGGTGAGGAAGACACCCAAGCCTGAGAATCTACTGTACTCTTCAAAATAATAACCCACTGTTTGCCTCTGGTGAAGCTATTGCATTTGTGAGGCTCATCATCTAGTTTCCGGCTGGGCAGAGGAACCACACCTTGGTTCAAGTCAACTTCACCTCCATCCCCCGATGACCCTGAGGCCACGGCTGGTCCTGGATGTGGCAGAATTCTGAGGCCTGGAGTCCCCTTCCAACCCTTACTAATTTCAACTCACTCTTTCAGTATGAGAAGTTTCATATAAGAGACATTTCAGTGAGTGATGGTGGACTAGTGAAGGTGAGGGGATACCTTCTCCATGTCCCAGAGGGCCGTAAAATTCAGCACACCCTGTGGATGGAGCCACAGTCCACCTAAGGCAGCAAAGACCATCATACAATTAAACCAGGTAGCTAACGGCTTGAAACTGGGGTCAAAGGAGAGGGAGTCAAAGATCACTCCTGGATTTTGCTTCAGCT TCONS_00146571 TCONS_00146573 r 5' 0 TCONS_00146571 TCONS_00146573 r 5' 0 EMBV3_19850 ATGAACTGACGAGGCATTACCGCAAACACACGGGAGTGAAGCCATTCAAGTGCGCAGACT Gene GeneID:100140477|KLF12:XM_002691889:27_cdna Constitutive 0 NULL GeneID:100140477 12 GENE KLF12 NULL Kruppel-like factor 12 EMBV3_18403 GATCTCCTGACTCTATTTGGGACTTTAGGGCGGGCGAGTGAACAGTTCTCCCTGACAAGG Gene GeneID:510699|RND2:XM_002696004:406_cdna Constitutive 0 NULL GeneID:510699 19 GENE RND2 NULL Rho family GTPase 2 EMBV3_37987 TCTTCTTACATCTGCCAGAGGAGGAGAGGGAAGATGGGCCAGAAGACTAAGACTGATTGC Gene BVT0102_081526 + 0 NULL GK000026.2:47879376-48269079 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26551 CCTTTGTCCCCTGCATTGGAAGCGTTGCAGTTTCTTAACCACTGGATCACCGAGGAAGTT Gene GeneID:520143|EAPP:NM_001075800:26_cdna UTR3_Alt 3 NULL GeneID:520143 21 GENE EAPP MGC139672 E2F-associated phosphoprotein EMBV3_39977 AGCACCATCGTGGCTGAACCTCTTCTTTCGAGAGGCCTGGGGTACACAGTAGAAGAATGT Gene GeneID:784268|LOC784268:XM_002697966:691_cdna Constitutive 0 NULL GeneID:784268 25 GENE LOC784268 NULL similar to Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein) (CD269 antigen) EMBV3_28873 TTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCCATCCACACCACCATCCTGAACCC Gene GeneID:282162|CAMK2G:NM_001097564:239_cdna Constitutive 2 NULL GeneID:282162 28 GENE CAMK2G NULL calcium/calmodulin-dependent protein kinase II gamma EMBV3_26179 TTCCCTGCCACGCATTCTTTGCCGTTTACAAGACATTAAGAGGTATGGTGAAAAGACATC Gene GeneID:534227|DOCK4:XM_002686809:195_cdna Constitutive 0 NULL GeneID:534227 4 GENE DOCK4 NULL dedicator of cytokinesis 4 EMBV3_27415 GAAGCCTATAACTACCGTCAGATCTTTGAAAACCACTACCCAGGCCGTGCGGACAGGCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13202 TTTTGATGGGGAAAATTAAGTTTACATTTTTCATATTTAGTGTTAAATAATTTTATGTAG Gene GeneID:511371|SIX1:XM_002691019:360_cdna Constitutive 2 NULL GeneID:511371 10 GENE SIX1 NULL SIX homeobox 1 EMBV3_11648 TCTTTTAAGGGTGGGAATCAAGGGAACCATAGGAGGACACCTCATCTGTGTGTTGAACCC Gene GeneID:615081|MGC128049:NM_001035460:29_cdna Constitutive 0 NULL GeneID:615081 19 GENE MGC128049 NULL hypothetical protein LOC615081 EMBV3_05807 ACCCAAACTGTCCTGTTTTGTGCTGAAAAGTGACCACGTCCCACATACACTGGCGGAGGT Gene GeneID:100138791|LOC100138791:XM_002694762:530_cdna Constitutive 0 NULL GeneID:100138791 18 GENE LOC100138791 NULL hypothetical protein LOC100138791 EMBV3_20354 CTCTAGGCTTTGAGCAATGGAACGTCTTCGCAGAAATAAAAGAAGGCTTGCAGCTACCAG Gene GeneID:100335456|LOC100335456:XM_002699928:68_cdna Constitutive 0 NULL GeneID:100335456 X GENE LOC100335456 NULL small nuclear ribonucleoprotein polypeptide E-like EMBV3_26917 GGTGGACTAATGAATTTCCAGAATGCCAAGAAACTGATGTCACACCAACAGTTCCAAAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29720 GAGGTCATAGAAGTTACTAAATATCCTATAATGCATAGAACAGCCCCCTCCCCCTGCCAG Gene BVT0102_215401 + 0 NULL GK000001.2:55266049-55872820 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10607 CTCTTTGCAACCCATGGACTACAGCACACCAGGCCTCTCCCTCACCATCTCCTGAGTTTG Gene BVT0101_051118 - 1 EMBV3_22558 GK000001.2:114768665-115291700 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39450 CCCGAGCTCCTTTCAAAACCAAACAAACTGACCGTGAGTGGCTTCAAGGACAAATGCTCC Gene GeneID:521410|YPEL1:NM_001100386:73_cdna Constitutive 0 NULL GeneID:521410 17 GENE YPEL1 NULL yippee-like 1 (Drosophila) EMBV3_29641 CCAAAACGCTGTCTTGAGTCATGAGATCCATCAGTTGTTGACATCATCCTGATCTGCATC Gene BVV0102_058377 + 1 EMBV3_39170 GK000007.2:32388794-32714460 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00232144 1 XLOC_141630 NonCoding TCONS_00232144 XLOC_141630 NonCoding NonCoding - 8:62722637-62723911 - TSS173648 1274 1 TCONS_00232144_2 64 1 0 0.00224447580279088 0.0022800989253563 0.00215732700575399 0.00332969980260667 0.00348780210658935 0.00231755279294322 0.00385538485289614 0.00445344396598801 0.00616842758467915 0.000755723355578362 0.000519290928330315 0.000294699381506476 0.000904625453206415 0.00163353536312434 0.0018251294006245 0.0201048259168316 0.0132879051520809 0.0213463076080104 0.000758932943525582 0.000813787121492175 0.000707304315045107 0.00880209658234535 0.0157845573486217 0.012629415277441 0.000657136280943406 0.000875614834211103 0.000733160533100365 0.00233721242747769 0.0016013707770748 0.00425120599743288 XM_005210186.1 LOC101904753 PREDICTED: Bos taurus chromobox protein homolog 1-like (LOC101904753), mRNA. 0.0 2277 100.00 0.989795918367347 NM_006807.4 CBX1 Homo sapiens chromobox homolog 1 (CBX1), transcript variant 1, 0.0 1261 81.53 0.99607535321821 0 noncoding GAAAGAAGGAGTTCTCCTTGTCTTGACACCATAAAGGTGGCTTGAGAAGATGTCCTTTGAAGAGCCAGTATAGTTTCTGTGCCCTACAGCAGCCCAAGGGCTTCAAAGCCGTTCCATGCTGTACAGTTTGCACACCCATCCCGGTGGAGGGGAAGGAGGGTCAGTGTTTCAAGGCAACCCGTTCTGAACTTTGCTTTAAAAAAAAGCAAAGGGCCTTCTATGAAGGACAAAACGCAGAATGGGATGTGGGAGAGCAAGAGGTACTGTAGATCTTCAAAGAGCATCTCCACAACCCACACAGCCTTCTTCCCGATAGTGTTAACTCTGCATTTTTACAGCGTAGCATGTGTGTAGTTTTTGGCTATTACTGGTGTATTATTTGGGGTGGGTGGGGTGGGGTGGGAAAGAAGGGAGATGGGTTAGGATCATTTTTGTTAAAATTTGGGGAAACGGTGAAACAAAGGAAAGAACAACTAATGATGATTGGGTTCTGTGTCCGGAATATTGTATCCTTTCAAAAAATGCCATTGGCAACCTAAATGAGGACTGTGAGAGACTGTTTAAAAGCTGTGAATGCCTGAAACTTAGAAGCCAAGGTATTCCCTGCCTGAGCTTAATGCTGTTCCCAACAAAGGAATAAGAAGCTACCAAAGCTGCCATTTGGGGGATGGAAACTGGTTGAGGAGGATAAGTCTTATTGGAGTGTATACACAGGCAGATCATTCTGTCTTAGAGGTGCTACTCATGAAACTGACAAGAAGACCCTTTCTTTTCCTATTGTGAAGTTACAAATATCAGCTTCTCCATCCAAGCCACTGGTGAAGTATTTAGGGAAGGGCAGAGAGTGGTATAGGAGGTAAGTGAGTAGGGAAAGACAAGGGCCGGTGCTCATAGGGTGGAAAACTCTTGGAGCCTCTGTTTTTGAACTTTGAAACCATTGGTGGCAGGGTTCAGTCACTGACAGCACAAGTTCAAGAGTTGAATGATTTCAAAAGCCCTGGTCTCAGGAGAAGATAAATATTCATACTGGGGTAGTGGTTCACTTTAAAACAAAACAAATTTTTTAATCCTAAGAACTAACTAAAATCCAAAACGCTGTCTTGAGTCATGAGATCCATCAGTTGTTGACATCATCTTGATCTGCATCTAGAACTCCATTGTAATTTTTAGGCGTGTGTTAGGTTTTTGTGAAAAGTTGTTTAAATGTAAACTTCATATCAACACTGTCAGTTTTTTGTCTTAATAAAACTATATAGATTTATTAAAAAAAAAAA TCONS_00227906 . 5' 120815 TCONS_00227906 . 5' 120815 EMBV3_17352 TTTATGGACATGGCCAGCTTTCTCACAAAATGGCTTATGAAAGGAGTGTGATGCAGGATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28629 AAGCGTGGTCCTTGGTACATGGGGAGCTTGAATTGTTGACAAAGCTTCCTTCCCTCCAGA Gene BVT0102_105824 + 0 NULL GK000019.2:20742528-20792194 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35927 TAGACCATACACTCTTCTCCCCACATGCACCCACCGAAGTAGATGTGCCGACATACGGTA Gene GeneID:511591|SORT1:XM_002686189:406_cdna Constitutive 0 NULL GeneID:511591 3 GENE SORT1 NULL sortilin 1 EMBV3_13365 TCCCCTCGGGCGGCTATTCTTCCATCAGCAGGGCCCCCTCCTAGGGCGGGATGGCTCACG Variant GeneID:100336654|LOC100336654:XM_002683966:1_cdna 362^520 1 EMBV3_12576 GeneID:100336654 Un GENE LOC100336654 NULL mannosidase, alpha, class 1B, member 1-like EMBV3_04995 AGACTTGTCATGGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAATGCCAAGGTC Gene BVV0102_046710 + 0 NULL GK000023.2:30852910-30960004 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21083 GATGACGGAATGCCCTGCTGCTTGGTGTCATCCCTTTGAATGGTCTCCTTTGTGTCATCA Gene BVV0102_261222 + 0 NULL GK000002.2:126816923-126844576 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00112392 1 XLOC_068288 NonCoding TCONS_00112392 XLOC_068288 NonCoding NonCoding - 2:126819140-126819969 - TSS84013 829 1 TCONS_00112392_2 109 0.300361881785283 1 0 0 0.000121211565395053 0 0 0 0 0 0 0 0.000243196964842932 0 0 0 0 0 9.5578735931949e-05 0 0 0 0 0 0 0 0 0.00086919256635857 0 0 0 0.00018153556747828 0 0 noncoding 0 0 0 0 -0.0760159326102289 0.540872952612831 0.0221845516578045 0.634912321409873 GCTCCGCAGGGGCTGGGAGAGGAAGGAGAGGTCCATGAGGGGGCTGCCAAGCTCAGTGAACGGGAAGGGAGGAAGACTCAGAAGGGCATGAGAGGAAGAGTGTTCAGTGACCAGGAGTGGTGGAGGCTCGGAGGAGGGCGATGGGAGGGACTCACTGAATGTGATGGACTCCGTGAGGGGAGAGGGGTTTAGGGGCCGCATTGGTGCTAGAGGCTCACAGAGGAAGAAGGAGAAGGGAAGTTCAGTGGGGAGGATGGGGCTTGGGGAGTCAGAGGAGCTCAGTGGGATGACGGAATGCCCTGCTGCTTGGTGTCATCCCTTTGAATGGTCTCCTTTGTGTCATCAAACCTGTGTCCTTCTCTGTGCAGAAGACCCCTCCCCCATCACTGTGGGGAGATCTACAGGTGATCATCAAGCAGATCACTGCTCCCCACTTCTGGGGGATGAATCAAGGGGGGAAAGATTAGGACTTCCACCTTCCACCATCAGCTAGATCCAGAGAACCAGTCAGATCTGAGTTCGAATTCCACACACACTGCCCATCTGGGTGACTCTGGGCAAGTTGTTTCTCTGAATTCAGCCTACATTTATCGAATAGATGAACATTCTCATCTTTCCACAGCATCCCTAAGGGAGGGGCATCAGCATCCTTTGTTCTTGGGAAACCGAAGCCCAGAGAACTGAAGATAATTGCACAAGGTCACACCACAAATCAGTGACAAGACAAAGATTCAAACACAGATCTGACCCACCCAGAAGGCATAGCTCAGCTCCCTGCTGTTCTCTGATATGTCCCCTGTTCCTACCCTTTATGGCATTTCCCACTAGT TCONS_00106647 . 5' 2219 TCONS_00106647 . 5' 2219 EMBV3_35769 AGCCTGGAACAACGCCCGGCACATAGTGAGTGCCCAACAAGAACAAGTGTCGAATCAATA Gene BVV0101_027184 + 0 NULL GK000013.2:53710783-53813167 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02181 TCCCAGTAACTTCAAATTCCATTGGTCGAAGTGACTTGGTTTTCCTGTTTGTAACCATAA Gene GeneID:537675|UTP11L:NM_001098092:233_cdna Constitutive 2 NULL GeneID:537675 3 GENE UTP11L MGC138956 UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) EMBV3_16817 GGCAAGGTGTTGCCTATATGTTTTCCTGGGGTCGGAGTTTGACCTCTTCTGGATGGAGAG Gene GeneID:511175|MGC157237:NM_001083667:8_cdna Constitutive 0 NULL GeneID:511175 6 GENE MGC157237 NULL hypothetical LOC511175 EMBV3_14065 TGTACAAGGAGGATCAGGGCAGTGTGGATGTGTCACGCCTTTGCAGCATTCCTGACATTT Gene GeneID:518896|ADD2:NM_001099009:23_cdna Constitutive 0 NULL GeneID:518896 11 GENE ADD2 MGC152063 adducin 2 (beta) EMBV3_05696 CTGGCCCTCGGATTTTGCTCCTGCGAAGAGAAAGGAAATGCCTCGTATGTTTAAGGTCAC Gene GeneID:787410|CDC42BPA:NM_001099729:117_cdna Constitutive 0 NULL GeneID:787410 8 GENE CDC42BPA NULL CDC42 binding protein kinase alpha (DMPK-like) EMBV3_07368 GCTTGGGGACAGGAAGTGTTTGCTGAACCAGGTGAACACTCATACCTGGCCCAAGTGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20270 GCACGTAGTGGCGGTTGTGAAATAACGTTTGCTGTTCTTCCCGAGGCTAACGTGTGATTG Gene GeneID:100138632|LOC100138632:XR_083849:165_cdna Constitutive 0 NULL GeneID:100138632 14 PSEUDO LOC100138632 NULL similar to WD repeats and SOF1 domain containing EMBV3_03573 CGGGTTAGTTTGGAATGAGCACAACTCGGAGAAGCTTTAAAATGAATGAGAAGCAGCGCC Gene BVT0102_028647 - 1 EMBV3_23441 GK000030.2:16257204-16396808 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00246403 TCONS_00246402 TCONS_00246404 1 XLOC_150970 Coding TCONS_00246402 XLOC_150970 Coding Coding HS6ST2 X:16394566-16398853 j TSS184726 3199 1 TCONS_00246402_2 236 2 0.254083061129258 5.56896055934937e-06 2.61715018607147e-06 2.89275303524456e-05 2.59551102513225e-06 4.02812706382549e-05 6.33618753586575e-06 2.37604858042983e-05 3.49988992574704e-43 5.87832144257718e-05 1.09282925696119e-05 0.000231043657914301 0.000148562974615022 9.86621038173943e-06 2.20548390066826e-06 1.3267588852814e-06 0.000246976673369707 1.72923855676118e-06 6.30629329592325e-21 2.46574782395866e-05 1.3110076412048e-06 3.16184310440099e-07 4.68572292271769e-05 7.4798999673288e-06 0.000234504962050805 2.81530882448995e-06 0.000151965091709756 4.02940439475769e-05 5.1043107357675e-05 2.77636378780786e-209 7.50318221746259e-13 NM_001206635.1 HS6ST2 Bos taurus heparan sulfate 6-O-sulfotransferase 2 (HS6ST2), mRNA. 0.0 5669 100.00 0.982181931853704 NM_147175.3 HS6ST2 Homo sapiens heparan sulfate 6-O-sulfotransferase 2 (HS6ST2), 0.0 3456 84.48 0.982181931853704 TCONS_00246402_2 sp|Q96MM7|H6ST2_HUMAN H6ST2_HUMAN Heparan-sulfate 6-O-sulfotransferase 2; 1e-123 368 86.44 0.995762711864407 1 coding 0 0 0 0 -0.0237506598778505 0.854391468178876 0.0397244003580342 0.617958542468793 GTGCTTGACTTGGTTCCATCTGGCTCCTCACTCCTGGGTGCAGAAGCAGCATCCCTCAGGAACTTCCACTATATCACCATCCTCCGAGACCCAGTGTCCCGGTACCTGAGTGAGTGGAGGCATGTCCAGAGAGGGGCAACATGGAAAGCGTCCCTCCACGTCTGCGATGGCAGGCCCCCAACTTCTGAAGAGCTGCCCAGCTGCTACACTGGAGACGACTGGTCTGGCTGCCCCCTGAAAGAGTTCATGGACTGTCCCTACAACCTAGCCAACAACCGCCAGGTGCGCATGCTGTCCGACCTCACACTCGTTGGCTGCTACAACCTGTCAGTCATGCCTGAAAAGCAGAGGAACAAGGTCCTCCTGGAAAGTGCCAAATCGAATCTGAAGCACATGGCATTCTTCGGCCTCACTGAGTTTCAGCGGAAGACCCAGTATCTGTTTGAGAAAACCTTCAACATGAACTTTATTTCTCCCTTTACCCAGTATAACACCACTAGGGCCTCTAGCGTAGAAATCAATGACGAACTCCAAAAACGTATTGAGGGACTGAATTTTCTGGATATGGAATTGTACAGCTATGCAAAAGATCTCTTTTTGCAAAGGTATCAGTTTATGAGGCAGAAGGAGCATCAGGAAGCTAGACGGAAGCGTCAGGAACAACGCAAATTTCTGAAGGGAAGGTTCCTTCAGACCCATTACCAGACCCAGAGTCAGGGCCAGAACCCAAATCCGAGTCAGAATCCGAGTCAGAACCCAAACCTGAATGCTAGTCAGAGTGGGACTCAGAATCTGTTTCAGAATCTGATTCAGAATCTGACTCAGAGCTCGGGTCAGAATCCAAGTCCAAAGGAGAACCAGGAAAGCCAGAAGCAGAATTCAGGCCAAGAGCAGAGCGATGGCAACACCAGCAATGGCACCCATGACTATATAGGCAGCGTAGAGAAATGGCGCTAAGTGGCTCCCAAAAGCTTTCACACACTTCTCCCAAAGCGCCAGTCAAAATAGGGCAAATCCTCAAACATGAGAGCGTCCAAACACATTCTGCTTCCTAAAGTTTGGAAGTTCAAAAAAGTTAAGATGTCGCCTTTACAGTTGCCTTTCAATTCAGTGTTCTACTGTGCGTGGGTAAAACAAATTTCAATATGTAATTAAATTGCCTTTTTTTTTTTTTTTTGGTTTGTTGGAGTATTTATAAAATCCAAAAGCCAAACCAGACTCACCAGAAATTGCTGTTTAGATATTTTAAGAAGTTCTTAAATTAGTCATAGGGACAAAGTGGAAACATAAAATGTGGCCATTTAACTTATGCCTAAGAAATGGACTTTACATTATTCATGACACACTGTTGAAACCCAATCTTGGAAGCAAACATTTTTTTCCAGGGGTAAGCATGAATATAACATAAAACAAACTAAACACAAAACTTCATTTTCTTCTGATTATAACCAAGAATCTATTTAAATAAAATAAGAACTGATGGTAGAGTTTACCAAATAGTAGAAAATGGAAAACTTCTCTCCCAAACATGAGTAGTTTTATGTAAAAATATTGGCTTTTGAGTAGAAAGGGACTCATCTTGTTATTTGAGATGTTTAAAATTTTAAACTTTTTCTACCTTCTGCTATTTAAAGGTTTTAAACAGGGTGTATCTCATACTAAACCAAACACTTTTTCCAAATGGAGTACCAATGTAAAGATCTAATTTCCAGACGATTTCTGGGCACTGTAATTTCAACAATTCTGGAATCTTTTTGGCGCTGCTTCTCATTCATTTTAAAGCTTCTCCGAGTTGTGCTCATTCCAAACTAACCCGTTTTAGAATCTCTCTTCATCATCTAAATGGTGTGTTGCTGAATTTATTGTGATATATAATCCTGGATTAAAGTCAGGACTTTCTTTCTATAGAATTGTCTTATCAATGTTTGTGTAGTGAGATCCTTATCAAGAAACTCTTGAACAGGATAGCGTGTCTTAAAATATTGCTGAAGTTAGTATTCTGTTCTTGATCAGATAGAATTGAACCTGAATGTGAATGAATCGTTATTTACTTTTTGTACATTTTTATTGTAATGTTTCCAGTTGGGCTGTCTCTTTCTAGCCCATTAGTTCTTTTTCATGTTGACAGAGTGTAGACAATTACTAGAGAAAAACAAGGTTGGAATAAGCACTAGGATAGCCAATGTTATTCAGTAACACCAAAAGCTTTACCTCGATACTTTGGGTGAGCCGTGTACCAGCTTTAGTTTTGAGAAAAGAAAAGGCAAAAGTATTCTGCAGTGAGGTTAAACATCAGAAGCATATGGGTTGAAGAAAGTGATTTGGTATTGGAAGTCTGTGCAAAAATACTTTCAGGGTATCAAGTTTGAATTGCACGGGCCAAAAAGAAGTATATAACCCACTGTGCTAGCAAACATCCTGATTCTGGGCAGCTTCCATATTACGGGTTGTGCTATCCTTTCGTAAGGACTTACACTAAGCCTCTGGCTGTAAAGCAGAAAGGCAACTGCAAGTGGCTTTTATGTTTTCATGAGGGACATGCTTAGAAATGTGACCATAAAGTCACATCTTGTACAATCTGCTCATTTGCATGATCTAGTTTCATCTGTAATAATAAGGCCACAAACTGGACAAGAAGCTGAGTACTTGGGTTAAAAAATGTTTTTGACTCTGCGCTTGTATCAGTAGATCTAAATTTTGTTTTGCCTGACAGTATCGCAGTCCTGGGAATCTGAGAACTGGAAAACTGAAAGGAAAAAAATTTTCAAAATCCAAAATACCTTAAAGTCAAACTGTTTTAGAGTGAAACTATTTTGTGTACTTTGTGTTTTTAAACTAATGATTCTGTAGATCACTGTGGTATTTCAGTTTCATTTTGTTTTAATGGATGATGTTTGCTCTTAAAGCTGATAGGTACTGTTGGAAAGAAGGATGAAGCCCGAGCCAGTGGAAAAGCTTGTTACAGAAAAAAATATTTTGTGTTATTGCTGTGGTGTGCATGGTTTGCAGAGATTAAGTGCAGTTTCTCGGTCTATACTGATTTATTGTATATAGGGGATGTTATAAATATACATTTTGGTCATCATCATGTAAATCCCATGACTTCAACTGTAAACATCTGTCCAATGATGTAGCTTTACAAACCATTTACTGATTTTGTGTAATTTAACAATAGATATAAAATAAAGTTTAAATTACA EMBV3_34184 CTTTGGACTCACTTTTCCAAGGTCTCGTCATCAACACACATGAAGGATGGAACCACAGGC Gene BVV0102_049632 + 0 NULL GK000016.2:68986703-69009429 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09616 ACCACACCATTCATGGGGATCATAGATAAAACAGCCCGGACCCAACAGTACCCCCACCTT Gene GeneID:529494|TANC2:XM_002696062:384_cdna Constitutive 0 NULL GeneID:529494 19 GENE TANC2 NULL tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 EMBV3_02948 CATTGCCAAACCATTGCCATTGAGATAAGACACCTCCGTTCGAATCCCAGCTCTGCCTCT Gene GeneID:533805|LOC533805:XM_002686517:693_cdna Constitutive 0 NULL GeneID:533805 3 GENE LOC533805 NULL similar to hCG2036582 EMBV3_18979 TGGCCGTTGGTTTTATTACGTCCTTCTAGCTTTAGGGGTCTGGTTCTTCAATGCACGTCC Gene BVV0102_127367 + 0 NULL GK000005.2:46753949-47467838 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10715 GAGGAAACTAGCAGAGGGAGGAGTGCATCAGGAAGTCACTTAGACTAAGGTGTGCATTCC Gene GeneID:509426|RPS26:NM_001015561:968_cdna Constitutive 1 NULL GeneID:509426 5 GENE RPS26 MGC137851 ribosomal protein S26 EMBV3_04322 ATGACTGCTGGCCTGATGCACCTCCCACCAGCATCCTTTGACAGTGCCCTGTGCCACAGA Gene GeneID:524118|ARID5A:NM_001035349:68_cdna Constitutive 0 NULL GeneID:524118 11 GENE ARID5A MGC129026 AT rich interactive domain 5A (MRF1-like) EMBV3_07182 CTTTTTCCCCGGTCGCCTCTCCTCCGGAATCAGGGAGGAAGAGGAAGAAGAGGCTTACTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22323 CAACAAAATTAGAAACGAAAATGGAGAGATCACAACAGACAACACAGAAATACAAGGATC Gene BVT0101_071393 + 0 NULL GK000030.2:102063201-102213441 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00188739 1 XLOC_114780 NonCoding TCONS_00188739 XLOC_114780 NonCoding NonCoding - 4:74563552-74563721 - TSS141107 169 0.994082840236686 1 0 0 0 0 0 0 0 4.31339306345602e-06 0 0 0 1.35454917472027e-06 0.000309811940920352 0 0 0 4.34115463891001e-05 3.21260580791634e-05 0 0 0 0 6.58639924914631e-05 5.42843843820694e-05 2.34219919823474e-05 0 0 3.15177562874306e-06 0 1.43627466371869e-05 3.88095227318027e-05 XM_587494.5 LOC510362 PREDICTED: Bos taurus zinc finger, X-linked, duplicated B-like (LOC510362), transcript variant X3, mRNA. 4e-09 64.4 85.45 0.319526627218935 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 4e-28 127 80.88 0.781065088757396 0 noncoding 0 0 1 1 -0.167709153394665 0.36437466146639 0.0155779192119312 0.761513404889166 AGTTTTGGAAAGTTGTACTTTTCTAAGAATTTGTCCATTTCTTCCACGTTGTCCATTTTATTGGCATATAATTGTTGATAGTAGTCTCTTATGATTCTTTGTATTTCTGTGTTGTCTGTTGTGATCTCTCCATTTTCGTTTCTAATTTTGTTGATTTGATTTTTCTCCC TCONS_00182045 . 5' 252936 TCONS_00182045 . 5' 252936 EMBV3_22176 GTTCCACTGTGCTCTCTGTCAGCTCCAAGTCAACTCAGAGACCCAACTCAAGCAGCACCT Gene GeneID:100298918|LOC100298918:XR_083982:477_cdna Constitutive 0 NULL GeneID:100298918 19 PSEUDO LOC100298918 NULL similar to zinc finger protein 385D EMBV3_41781 TGGACGCGCTCAGGTTCTTGGAGAAGAACGCACTGAGGAAGGCAGTCAGAAACCCAGATG Variant GeneID:786474|PNPLA3:XM_002707823:110_cdna 782^982 1 EMBV3_18321 GeneID:786474 5 GENE PNPLA3 NULL patatin-like phospholipase domain containing 3 EMBV3_07834 GCTACATGCCAGATGGGGAAGATTTGAGAGAAAACGTAGATCAAGGTGAACTCCCTGCAG Gene GeneID:613694|KCTD18:NM_001046514:134_cdna UTR3_Alt 2 NULL GeneID:613694 2 GENE KCTD18 MGC137502 potassium channel tetramerisation domain containing 18 EMBV3_15909 GACCTACCATCAGCCTCTTAAATGAGCAAGCAGAAACTTGTGAAACAGTTGCCTTTAACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07170 ACAGAGAAGGGCATCCTCGTGCCTGAGAAATTGAAGGAATTCATGCCGCCAGGTCTCCAA Gene GeneID:281476|SARS:NM_174175:17_cdna Constitutive 0 NULL GeneID:281476 3 GENE SARS NULL seryl-tRNA synthetase EMBV3_33766 CCAGTCTGATTATTTTGCATGTGACTCTCCAGTTTTCCCAGTACCATTTATTGAAGAAGC Gene BVT0102_404659 + 0 NULL GK000001.2:37930839-37960748 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_11936 AGCTGACAACATCGAATTGCTCCCTGAAGCCCAGCACAAAGCAGAGGTCTACACAAAGCA Gene GeneID:534382|MTHFD1:NM_001083477:163_cdna Constitutive 0 NULL GeneID:534382 10 GENE MTHFD1 MGC137793 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase EMBV3_31514 GGTTCACCGGTTATCACTGTGTTTGGAACTAGGACTGATGGTCATCTTCGTGACAGGCAG Gene GeneID:404069|SPG21:NM_205772:56_cdna Constitutive 1 NULL GeneID:404069 10 GENE SPG21 MGC140003 spastic paraplegia 21 (autosomal recessive, Mast syndrome) EMBV3_00760 CTTCTACAGAAGCGATACAGATTGCATTTCTTTAACAGTTATTTCTTATCGCTCGTCTCC Gene GeneID:530393|PKD2:NM_001046312:183_cdna Constitutive 0 NULL GeneID:530393 6 GENE PKD2 NULL polycystic kidney disease 2 (autosomal dominant) EMBV3_09032 TCCCTGTACTATCTCATCCTCTCATCTCTAGGTCTGTTTCCCCACCCTAAGTCCATCTGG Gene GeneID:287024|NOS3:NM_181037:571_cdna Constitutive 0 NULL GeneID:287024 4 GENE NOS3 NULL nitric oxide synthase 3 (endothelial cell) EMBV3_29127 GCTTGTCTACGTGTGGAGCCGAAGGAACCCGTATTGCAGTTGGACACATATATTTTTTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12963 CCCAAACAAATAGGCCTTTAGCACCATCAGAAAACTAGCAGGGCACCTGGCATGAAAAGC Gene BVT0102_400450 + 0 NULL GK000028.2:24833329-24845366 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160355 1 XLOC_097634 Coding TCONS_00160355 XLOC_097634 Coding Coding ATOH7 28:24843469-24846418 o TSS119936 2949 2 TCONS_00160355_2 152 0.0376398779247202 1 0 0.000627993721477681 0.00104282344782641 0.00080989646341925 0.000832650764455082 0.000238436534477492 7.03836913128695e-05 0.000609752814136184 0.0010242996172534 0.00123135828612287 0.000139948681707209 5.22062169667313e-06 4.95407470052145e-05 8.83416928289928e-05 9.86020542350784e-05 0.000252127989877815 8.95610664929313e-06 0 0 0.000653646201420459 0.000754109026405798 0.000268378675872338 0 0 2.27394240917743e-05 0.000937101236013632 0.000706347763779499 0.000995436949512123 4.17035160914942e-12 1.68266679732834e-05 6.72778967286169e-05 XM_005197244.1 ATOH7 PREDICTED: Bos taurus atonal homolog 7 (Drosophila) (ATOH7), mRNA. 0.0 3261 100.00 0.6127500847745 NM_145178.3 ATOH7 Homo sapiens atonal homolog 7 (Drosophila) (ATOH7), mRNA. 0.0 1211 78.22 0.488979315022041 TCONS_00160355_2 sp|Q8N100|ATOH7_HUMAN ATOH7_HUMAN Protein atonal homolog 7; 3e-87 256 91.45 0.993421052631579 1 coding 0 0 0 0 0.0171167907342982 0.914066416076684 0.00868043898527919 0.852736171391063 CGTCCCCCTTCCCCCCTGCGGTTCCCAGGGTAGGAAGGTGCTGAGATGGAAGCCGAGGGACGCCCGCCCACCTGCCACCACCTGTTCCCTCCTTCAGCCTTCTGCTATAAATTCTCCTCCTTCAAAGATTGATCCAGCACTCTCCCACAGCTACTGCGGAAGAAGCGCTCCTTTCCTATCTGAGCTTCGGAAAAGATTTTGTCTTCCAGAAGTCTCCGGTTTTCCCAGAGACCTTTCTCGAACCAGCCACACCAATTCTGCTGCAGGAAAGTTCCCTTCTCTTTTGCAACTTAACACTGGGAAAATGACTTTCTCTTTTACCTCTCAATTTCCTCTAAATTTTGGCAAGTGAAGAGACATCTATCTGGTTATCCAATAGGACACAAGGCGGAACCCCGCACTCCCCACTGCAAACTTCCATTCCACGTAGTTGCTTTGTGTATGACTTATTTGCTAGGAAGAGCCAAATTGCAGAGCGGGTTCATACAGCAGCCACGCACAACTCTTGAAAGGACCCGAGAGCTCGGCGCCTCCCTCCTGCCGGCGGGGAATGAAGTCCTGCAAGCCCTGCAACACGGCGGCGGGAGCGCGTGCCGCGCCCCCTTGCGCGGGTGGAGCCGAGTGCGCGGGCACGTGCGCCGGGGCCGGGCGACTGGAGAGCGCGGCGCGCAGGCGCCTAGCGGCAAACGCGCGCGAGCGCCGCCGCATGCAGGGGCTCAACACGGCCTTCGACCGCTTGCGCAGGGTGGTGCCCCAGTGGGGCCAGGATAAAAAGTTGTCCAAGTACGAGACCCTGCAGATGGCGCTAAGCTACATCATGGCTCTGACCCGCATCCTGGCCGAGGCTGAACGATTCGGCTCGGAGCGGGACTGGGTCAATCTCCACTGTGAGCACTTCGGCCGAGACCACTACCTTCCGTTTGCGGGCGCGAAGCTGCCGGCAGAGACCGAGCCCTACGGCCAAAGGCTCTTCGGCTTCCAGCCTGAGCCCTTCCAGATGGCCAGTTAGGTCGCGCGGCCCGGTCGGAATGAGACGCCCAGTGATCTGCGCTGTGGAGCCGTAGCCTTCCCCACTCGGCGGCATAGGATGGACACCTTCTTAGAATAAAATTAGGAAATTTCCAGGTTACTTTTCGCATCTCTAGTCCTAGGGACGCAATGCTTTTATTGCTTTACTTTTTTCCTCCCTATTATGTTGTAGATTTCATTAATGCATCTTGGAATAGTTTTGATTGATTCCCCCCTTTCTGGGCGACTTTGAGGGAAAACAATGTAAGAAAAAATAGAATTGGGTTATACTTTAGGTTTAGTCCTCACTTCCTTAACCTTAGTAAGTCTGTCCTGTTAGGATGAAGTTACAGTATCTCTTACCTGTGTATGCTTAATACAGAGCTGCCTTCCTGTCTTGTAAATGCGTTTATGCTTAGTGTACTGTGTGCATGCATGAAGTAGACTTTCTTTTTTTCTTTGGTAGAATACATGGGTGTGAGTGCTCTGTATTTTTAAAAATTGTGTATACATTATTGTAATATACATTTTGTAAAATAGAATTAAAAACTTGGGTTTGCTTTTCATGCCAGGTGCCCTGCTAGTTTTCTGATGGTGCTAAAGGCCTATTTGTTTGGGGGGTGGTGACATTGAGTGCTTATCTGAGTAAAGATGTATTTAAATCTAACCCCAGCAATTGGCAAAGTGCTGATTTGTAATCATCAAAAAAAAGACAAGCTGATGAGTGTGCAAGTAATTAATTTGAAAGTTTTCTCTATCAATTTGGAAATATATTTTTCATGGTTTTTAAAACGATTGAATTAATTGAAATAATATTCAACTTTTAAACAGCTACACAGTTCCTTAATCTTTTGTTTTCCTTATTAAGCCAGTTGCTAACTACTAATTCCTTACAAGTACTCAAATATATATATTTGCTCATATATGTATTGAATATATGTATATTTGGCTTTTGGAAGTGATTTGCTTTTAATCAGTACCAGTTGGGCAATAAGGGCTTCACTACCACCAAGGCTAATCAAAAAAGCAGTAATAATAATACAGTAATGTAATAAAAAGCAGTGGTATTGGTTTGAATTACTTTTATAAGTTTGCTTAAGCATTGGATGAATAAGCCAAGCCTTTAATGTAAAGAATGACTTGGTCAACAGATAGCATGTTTTTCGGTGACTGTCTTACTAATATTGGAAAAAGCAAGACTCTTAAGCCATCTGTGCCTTTGGAACTTGTCGCAAGTTAACAAAACAATGACATTTCCCAAACCCTTTTTATAATATTATGGATTCCAACACCTAATATCAGGCATAGCCACCATTTGCAATTTTTATAGAGTCTTCTTTAAAATTTTGTTAGTTATCCCTGAGTATCAGATTCCTTTTGGTTTATAATGAGTGGCAGTATCTTTCCCAGGCCATCATCTAAAATTGACAAAATCACAAGTGTATTGCTAGAAATTCTGACAGTCTAATGCTGCATTTCCCTTTCCTTCTTATCTAATTTTTTTTTGGCTGTGTGCTTCCTTGTGGGACTTTAATCCCCTGAACAGGGATGGACCCTGTGCCCCCTGCAGTGGAAGCTGAGAGTCTAAGCCACTGGACACCAGAGAAGTTTTTCCCCTACCTTCTGATACCTGTAAATAAGAAACTAAGGAGTGCTCAGGATTTTGCTTCCTCAGTGCAAATTAGAGAATAAAATGTTTAACCTCTTGACTTCAACAGCTCTTAGAAGACACAGTAGTCCCAGAAGACAACAGATCTAGAAGGGATTATGTTCAGACCTCTTTCTGGTCATACTCCGCTCTGCAGTGAGTACTTGGGCTCTGGCAAGATTCAGAGCATCTCCCATCCTATTTGAGCACAGTAGTCTACTTATTTAGACTTACATTGCTTCATTAGGAGCCCCAGGGAGTTTGTGGAGTTTGTAGAATGAATAAAATCAGCG TCONS_00160356 s 5' 0 TCONS_00160356 s 5' 0 EMBV3_09834 GACACAGTTGTGCAACCATTCCCACCGTCATCTCCAGAACTTTCTCATCTTCCCAAACCG Gene BVT0101_064217 + 0 NULL GK000007.2:45182219-45195511 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00216803 TCONS_00216804 TCONS_00216801 TCONS_00216802 1 XLOC_131343 Coding TCONS_00216803 XLOC_131343 Coding Coding POLR2E 7:45193160-45200048 j TSS161609 3652 1 TCONS_00216803_2 183 0.360350492880613 6 0.470596776535502 0.000219401752753562 0.000221498033129426 0.000600224658747342 4.61259461630051e-08 2.58626054267896e-08 2.18103768318258e-10 0.000480172821704365 1.89421299507798e-05 0.000288356383614429 0.000213210333417113 0.000315613851189388 3.46761746123047e-06 4.16557770230202e-10 0.000245801110656188 2.29412811715413e-09 0.00144219524753804 3.42301273283171e-05 0.000344708857547019 8.19544101756892e-08 0.000260100927300594 6.98820044741812e-05 0.000311416516500432 1.25149585282222e-05 2.21682271305296e-08 0.000384495751160153 0.000481374267777781 1.16779915360727e-08 8.72268482202348e-05 6.5451283433019e-05 0.000352827603764321 NM_001038093.2 POLR2E Bos taurus polymerase (RNA) II (DNA directed) polypeptide E, 25kDa (POLR2E), mRNA. 0.0 1438 99.88 0.218784227820372 NM_002695.3 POLR2E Homo sapiens polymerase (RNA) II (DNA directed) polypeptide E, 25kDa (POLR2E), mRNA. 4e-146 524 91.60 0.0999452354874042 TCONS_00216803_2 sp|Q80UW8|RPAB1_MOUSE RPAB1_MOUSE DNA-directed RNA polymerases I, II, and III subunit RPABC1; 1e-127 362 86.67 0.994535519125683 2 coding 0 0 0 0 -0.0440635405810059 0.697474062491856 0.013837468816601 0.896444216513715 AGTGCCGCTCCCGAAGGTCGCTGTATTCAGGCGTTCGCCTGCGACAGCCGTGCCCGGGTAGACGACGTGTTGGGGGCCTGATCAGGACTCGGAGTAGGCACAGTGGGCGCGGGTCGTACCGGTCGCAGGCGCAGTGTGTGAGAGCGGCGGCAGTCATGGACGACGAAGAGGAGACATACCGGCTGTGGAAGATCCGCAAGACCATCATGCAGCTGTGCCACGACCGTGGCTACCTGGTGACCCAGGATGAGCTGGACCAGACTCTGGAGGAGTTCAAGGCCCAATTTGGGGACAAGCCCAGTGAAGGGCGGCCGAGGCGCACGGACCTCACGGTACTGGTGGCCCACAACGACGACCCCACCGACCAGATGTTTGTCTTCTTCCCAGAGGAGCCTAAGGTGGGCATCAAGACCATCAAGGTGTACTGTCAGCGCATGCAGGAGGAGAACATCACGCGTGCCCTCATTGTGGTGCAGCAGGGCATGACGCCCTCTGCCAAGCAGCTGGTCCCGGAGCATGTGGTCATGACCAAGGAAGAGGTAACGGAACTGCTGGCCCGGTATAAACTCCGAGAGAACCAGCTGCCCAGGATCCAGGCAGGAGACCCTGTGGCGCGCTACTTTGGGATAAAGCGCGGACAGGTGGTGAAGATCATCCGGCCGAGCGAGACTGCGGGCAGGTACATCACCTACCGGCTGGTACAGTAGCTGCTTGTGGACAGACAGCTGGTGTCGGGCCACGCAATGGTGTTCATCCCACTCCTGTGAGCGCGCCACACCACTTCCCTCTCTGGAGGCAGCCCCAGTTCTGGCCTGGTTGTGCCCAGCTTCTGTGATGAACAGTCACAGATCACACGACTAACTGCCCGTTTTTCTGCCAGCATGTCCCCTGGGGGACAGAGAGATAGATGGTCGTGACCACCCCCTCACCCTACCCCACCCCCGCTGCTCCTGGCCAGGAGTGTGGGAGCTGGTTGCCTTAGGAAACTTGCCTCTGCTTCTCCTGGATCCTAAGGCACTTCGCCTTGGGCCTTGGATCTGCCGTTCCTGGGCTGAGAGTCCCTGCAGCCTCTCCTGGATGCCAAGCCGTGGCCCTGGATCCCAGCTGACGGTGCCTCTGGAGGGGCCAGGACACCTCAGGGTGGCCCGGCATCCTCTGGCCTCCCCTCGCTGTGTCCCCCACGGTGGCCCTGATGCTGCCTGTCCAGGGGCTCTGAGGACAGTAGCAGTGAGAAGAAAACTGGAATTGGTTGCTTTGGAATGCTGGGTGTCTTAAAGAATTAAAGCTATTTTGAGTCATAAGTTCACTCATCTGAAGACCAAGGCAAAACAACGCTGGGTTTGCTGTGAGCAGACTTGCTCAGGCTCTAGGCCACTCCACAGGGTCACTGCCCACTTCCCCTGGAGGAGGCAGGGGTGGGGCTCCAGCACACCCTCTAGCTTTGCTTCTTGGTGCTCTTCCATAGAAGTTGGGGGTCAGACCACCTAGTTTTCCTCTATACTAACTTCAGAGGCCTCCCTCCCCAGGCTAAGTGCCACTGTTTGTATTTCTTATTAATAGCTTCTTTGACGTGCGATCTACATACCATACGGTTCACCCGTTTAAAGTTCGTGGTTCTGTGATTTTTAGTACATGCACAATTGTGCACCACAGTCAACTGTGGAACACTCCATCACTCTAAAAAAAAGCCCCATCCTGTTAGCAGTCACCCCAGCCCGACTACCACTAGCTCTGTCGATCGGCCTGTTCTGGACATTTCCCACCAGTGGAATCACACCCTGTGTGTCCTGTGTCTGCTTCTCTCCTGAGCATTGTGTTCTCAGGATCTGTCCACGTGGTAGCCGTGTCAGGGCTTCTCCTTTTCCTGGCTGAGGGACACTGTGTTTCTTCTTCAGTTGATGGACCCAGGTTGTTTCCATTATGAGTAGTGTTGCTGTGAGCATCCAGGTACACATTGCTGTGATTGTATTTATTTTTCTGGGTGTGGTGTGTACATTGGAGTAGAATTGGTCTTGCAGAAGCTCTGGTCACGCTTTGGAGAAGCTGTCAGACTGTCTTCCCTGTGGCTGCCCCATTTCTTGTTCCTGAGCCCCATAGAGAGGTCCCACTGTCTCCACCTCCTTGCCAGCACTGGTTCTATGGCCTAGGGGATGGGGAGGGGGTACAGGGTGGCCAGTGGTGGCGCTGTGGTTCCGGTTCCCTTGCCAGGTGCTGTGGTGGTGAGCATGGGGCTTGCTGGCTGCCTGTGGGTTACCTCAGATACGTGTCTGTGCACAGGTCCTTTACTTCTTGTTTAACTGGGTTGTCTTCCATTACTGAGTTTTAGGGGTTCTTTATATATCCTAGGCACAAATTACAAAACGGTTTCCCCACGTTTTATATCTCTTAGGTGTCCCCATGTAGTGTTTTTAGTTTTTGACTGCCTTGGGTCGTAGTTGCAACATGTGTGAGATTTTAGTTCCCCAACCAGGGATCAAACCACCTCCTGCTGTGCTGGCAGGTGGATTCTCAACCACTGGACCCCAGGGATGTCCATCCCCCTGTAGTCTTTATTTGTGGGTCTCAAATTCTGGGTTTACTCCTGGGCATCGTGTGACCTGGGGTGGTCACTTTCCCACAGACAGATGGTGCTCTTGACGCTGCTTACTGAGGAATAGTGCTGCCCTGAGTCTCCGCTCTTGGAGTGAACGCATAGACCCATGCGAGTCTGTGTGGAGATCCTCTTTTCATTGATAAATTTAGGTTTGTTTTTTTTTAAATTTCATTTATTTTTAATTGGAGCATGATTGCTTTACAATTCTGTGTTGGTTTCTGCCACACATCAACATGAATCAGCCATAGGTATACATATGCCCCCTCCCTCTTGAACATCCCTTCCCAAAGCTTAGATTTTAAAATCGTAATTTTACAGTACATCTTAACAGGCAAACAGGTCTCCCCTTTCTCCAAAACAGATATACATTGTTTTCCAAAACTGTCTCAGCCAGAATAAGCCAGATGTAGATGGACAAATTCTGTCTGATTCCATTTACCTGGGATCTCTAAGCAGTCAGGTCCACAGAGACAGAAGTAGATGGTGCTGGGGGGCCAGGGACTGGAAGGAGAGAGGGAGTTGGTGTTTCCTGGGGACCAGAGTTTCGGTTTGGGAAGATGAGAAAGTTCTGGAGATGACGGTGGGAATGGTTGCACAACTGTGTCAATGTGCTGTGCTTGTGAACTCTGCAGGTTAACATGGCAGAAACAGTAAACATGTAGTTTACAGTCTTGGATGTTCTTAGATTTTTACTCTTGCTAATGAACTCCAGAATCAGTGCATTGATTCCCTGAAAACTCCTTTTCTTCTGGTTGGGGGCCTAGTGGGGGGCACTGGGTGCAGGCCTGTCCACAGGTATGGGGCCTCAGATGCGAGGTATAGATGTTCCACCAGCGGTACCAGCTCTCCTTTGGGGTCCCCCCCAACCCCCGCTTGTTGCTTGGGGATCGGTTCTGCTGCCGCAAGTCCCTGAGATTGGTCCAGACGCCAGCCTCAGAGCTTCAGGAAGTGGGCACCTTCCCGATTGTGACTCTGGGTCAGGCCATGCCTGAAGGTGGCACAGCCTGTTAAAAGTCCTTTGGTGGGGTCGCGTCTGGAACCGTTTGCAGGCCAGGCCAG EMBV3_28781 TATAGAAATGTTGGAAATAAAGAAATCTAAAAGTTACCAGGTGAGTACTCATCAAGGCAC Gene BVV0101_024426 + 1 EMBV3_06850 GK000015.2:17532254-17641415 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01063 CACCATTTCGGGGACCCCTCAGGGAGTGGTTTTGGGGTTCCCACTGACTTCTAAGAAGGA Gene GeneID:338437|SOCS2:NM_177523:19_cdna UTR3_Alt 2 NULL GeneID:338437 5 GENE SOCS2 NULL suppressor of cytokine signaling 2 EMBV3_20290 CAGAAGCCCTGTCGCTCTATGAAGAACAGCTGGGGTGCCTGTATTGTCCTGTGGAATTCT Gene GeneID:534520|LOC534520:XR_083669:82_cdna Constitutive 0 NULL GeneID:534520 5 PSEUDO LOC534520 NULL hypothetical LOC534520 EMBV3_01680 GGACCCAATCTTCAGGACCCATTTTTCACTAGGGAGTGAGATTTACTGGCTTGACTGCTC Gene BVT0102_268699 - 1 EMBV3_14081 GK000017.2:23531014-24083434 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_08592 CAAAAAGGGACATTTATGTGCAGTTGGGACAGCAAACTGAGTCCTGGACCTAAAGTTGAA Gene GeneID:784587|KCTD1:NM_001080360:16_cdna Constitutive 2 NULL GeneID:784587 24 GENE KCTD1 MGC137856 potassium channel tetramerisation domain containing 1 EMBV3_24617 TGGGGGATGTGGGTGAAGCACAAGTCAACCGGCATGGCTAATCGTCTGGATGACAAAGAA Gene BVV0102_149717 + 0 NULL GK000016.2:62772809-62804446 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00067923 TCONS_00067925 TCONS_00067921 TCONS_00067926 TCONS_00067922 1 XLOC_041558 Coding TCONS_00067922 XLOC_041558 NonCoding Coding - 16:62791175-62800874 - TSS50957 1353 2 TCONS_00067922_2 65 0.546193643754619 5 0.861002268508971 0.00149592035504734 0.000472335745070447 0.00153927559445646 0.000243736967582076 0.00171908577240671 0.000838516701081417 0.00119992509471646 0.00235866804470136 0.000501506101135976 0.000500744093070346 8.45965315191995e-06 0 1.49406483563464e-05 0.000222621430746912 0.000255886296921958 0 0 0 9.33005624414232e-17 0.00137425161264787 0.000513471923856937 0 0 0 2.08300345731488e-06 0.000669260814660617 0.000162831802167255 0 7.31966397970583e-06 0 XR_228116.1 LOC101908894 PREDICTED: Bos taurus uncharacterized LOC101908894 (LOC101908894), 0.0 681 100.00 0.27790096082779 0 noncoding CTCCTCCCTCCCCCTGCACTAGGTCGTATTTTTAAAACTCGGTCTGTTTGCAATGTGGAGACTGGGCTAAGGGTAAGACAGAAAACTGGACCCCAACGGGGAGGTGACTGTAGTAGTCCAGGTGAAAGGCAGTGGAGGCCTGGGGATAGTGGGGGTGGGGGATGTGGGTGAAGCACAAGTCAACCAGCATGGCTAATCGACTGGATGACAAAGAACAAGCTGCAGGAGGACATGGCCATCTTCTTTCTGGTCCTTGCTTGCCTCACTGAGAGGAAGGATGGTGACCTAACTGGCATGGAGAGGTTCACCTTGAAGACCAAGAGGCAAGTTCTGAAGGGACAAAGCCACGATTCCTTCCCTGCTGCTCAGCCCTTGCCTTCCAGCGGCTCACACTCTCTCTGATCCTCAGTGCTAGTGAGGAAGATAACTACAACACTGTTTAACAACAGAGTGAAGGCACTTGACTTTTATCGGCACCTGATCTCACCACTGGAGTGCATCCATCCCTGGGAATCCCAGGTTGCCAGGGGACTATCTGTGCAGTTCAAGACTTTGGCACAGAGAATATGAATGGATGAAGGGAGCAAAAGCCCCAGCCTCCAGATATCTGCCTGGAACACTCTTCCACATTGACACAAGTTTCCCTCCCATTCTCCATTTGGGTCTTTGGATCAAATATTACCTCATTAGAACTGCCTTCAGACTGGGGGCAAGAGGAACCCCCTACCTTGTCTTCTGAGCTCTCCAGTCCTCTTCCAGCCATGCCCCTTTCCACAGAGTTAGAAGCCCATGGGTATGGCTGGAGCTCAGATATGCAGACAGGGATGTTATAGGTGCAGGCACAAAGTCCCATGAAGAGTGGGACAGAGCTGGGGTGCAAAGAACGGGAGGAAGTTTGAGGGCCAGGGACCAGTTACCACCCAAGAAGCCCCATTCCAGTGTACATCTTAGGGGGAGTCTGAGAATCCTAAACTTAAGTTTGGCCTTCCAGATTTTTGTGACTGTGTACTTGTCAAGATGAAAGGACAGGATTTCTACCTAAGTTTAGACTGGCTTATAATTTTAAATTAGGTAGATATACGTGTGGGGCTTCCCAGGTGCTCAGTGGTAAACAATTCGCCTGCCAATGTAGGAGACATGAGTTTGATCCCTGGGTCGGGAAGATCACCTGGAGAAGGAAATGGCTACCCACTCTAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGAGGGCTGCAGTCCATGGGGGTCGCAAAGAGTCGGATGTGACCTAATGACTGAGCACACACACATGATATGTTTATCTCCATTTGCACTGTTTGCCCTGGCCCTGTAAATATCAGGNN TCONS_00067923 TCONS_00067923 s 5' 0 TCONS_00067923 TCONS_00067923 s 5' 0 EMBV3_22749 GGTTCTTACAGAGATTGCAGAAACCTGGTGACCTAAAGGGACTGCCAACCCAGAGGATCA Gene GeneID:504782|TXK:XM_002688247:73_cdna Constitutive 0 NULL GeneID:504782 6 GENE TXK NULL TXK tyrosine kinase EMBV3_27679 TGCGCAGCCCTGTAAACATTAGTAAACTCCGAGGGACTGTCCACGGCACAGACACAGCCC Gene BVT0102_036530 + 1 EMBV3_04871 GK000012.2:89331788-89339067 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00041605 1 XLOC_025411 NonCoding TCONS_00041605 XLOC_025411 NonCoding NonCoding - 12:89335750-89336132 - TSS31106 382 1 TCONS_00041605_2 122 1 0 0 0.00223589978050192 2.42251869652304e-05 0 5.16981650729685e-05 0 0 0 0 0 0 0 0 0 1.28434529216176e-05 0.0019359252296314 0 6.56830015570788e-05 0 0 0 0.00631339630038029 0 0.000131659441281254 0.00126961505627476 0 0.000199395335185318 0 0 0 NM_005537.4 ING1 Homo sapiens inhibitor of growth family, member 1 (ING1), 5e-50 201 77.78 0.672774869109948 0 noncoding 0 0 0 0 0.0101233131425413 0.930142122714963 0.0524842673832756 0.472541277108945 AGGGAGGGGAGGGAGGATGGGGCGAGGAAGTCGCCCATCCGTGCTGCGCTCGGGGGGCGCAGGCAGGTACCTTCGGTTTGGAGAGGGACCTGGCAGGGGAGGGGATCTGTGCATCGTCCTCTGCAGCCCCCGCCGCCCAGACTGCCCGAGAGACGCAGGGGTCGGGTCCGCGGGGAATTGTCGGCCGCTGGGGAAACTTTGCTGCCCGGTCAGGCACGGCGCTGGGGGCTGTGTCTGTGCCGTGGACAGTCCCTCGGAGTTTACTAATGTTTACAGGGCTGCGCAGCAGGGAAACGGAAGAGCGGGGGGAGGTGGACAGCCAGGAAGAGCCCCACAACGAACCGAGAGCCCGTACGGCAAGGCGCCCCTGCGCGCTCTGCCT TCONS_00037555 . 5' 768 TCONS_00037555 . 5' 768 EMBV3_28523 ATAGTCCTATAGAGCCAGGGATGGTAGCCTCTGGTGGACAAGGCCCACTGAGCCAGAAAG Gene GeneID:539828|LOC539828:XM_002692346:162_cdna Constitutive 0 NULL GeneID:539828 13 GENE LOC539828 NULL similar to chromosome 20 open reading frame 165 EMBV3_26276 CCACAGAGGAAATGCAGATGGCCAACAGGCACATGAAAAGATGCTCAACATTGCTAATCG Gene BVV0102_324689 + 1 EMBV3_23665 GK000001.2:95768273-95795891 1 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33942 TCAGAGTAACCTACTTAAAATGCAGTGGGGTTCTTGGCTAATCTGGAAAGCTGGGCCTCC Gene GeneID:510684|PPIP5K1:NM_001105354:205_cdna Constitutive 0 NULL GeneID:510684 21 GENE PPIP5K1 HISPPD2A MGC166325 diphosphoinositol pentakisphosphate kinase 1 EMBV3_33665 CTGGAGGGAAGCTGTCAATGCCTGTAAAGAAGAGGATGGCTCTGCTGGTGCAAGAGCTTT Gene GeneID:780787|SRA1:NM_001079642:44_cdna Constitutive 0 NULL GeneID:780787 7 GENE SRA1 MGC128615 steroid receptor RNA activator 1 EMBV3_06864 AACTGCATGTCAAGTTCCAGTTTCAATGTCCCAGTGGTGGCGTCTGCGATGACAGGGGTT Gene BVT0102_134211 + 0 NULL GK000013.2:18664295-18840198 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42039 AGGCCTGATCATTCCAGCCATCCTGCTGATGTTCCTGGCCATCTACTACTTGAACTCAGT Gene GeneID:515300|TMC2:NM_001113766:1087_cdna Constitutive 0 NULL GeneID:515300 13 GENE TMC2 NULL transmembrane channel-like 2 EMBV3_05990 CAGAAAGTAATCAAGCGTGCAGAAGTAGTACCAATGTATGGAGTTCAGAAATACGATCCC Gene GeneID:404143|GHITM:NM_001034052:254_cdna UTR3_Alt 2 NULL GeneID:404143 28 GENE GHITM MGC127644 growth hormone inducible transmembrane protein EMBV3_38934 GTTCAGCTTGTACCGTGCAGTGGTCCCTTGAGTTGGTCCCGGTTACACCAGTTGTTTCTT Gene GeneID:507268|ZNF212:XM_002687140:522_cdna Constitutive 0 NULL GeneID:507268 4 GENE ZNF212 NULL zinc finger protein 212 EMBV3_36923 GTCACTGGAGACAGGAGCTATGTTAGTGTGAGGAGAGGGCCTTAACTGAGAGAACTACAA Gene GeneID:616676|GALM:NM_001034795:176_cdna Constitutive 0 NULL GeneID:616676 11 GENE GALM MGC127639 galactose mutarotase (aldose 1-epimerase) EMBV3_20673 GTCTCAAGTATTGTCTTTATTTTTGAGACTATTTTCGTACGGTTGTCATACACAAGGCGC Gene GeneID:532797|IMPAD1:NM_001046335:38_cdna Constitutive 2 NULL GeneID:532797 14 GENE IMPAD1 MGC129108 inositol monophosphatase domain containing 1 EMBV3_41708 TTGCCAAAAGTACGGTCTCTGGTCCTTCCCTGTTTTCTGTTCTAGAGTGTCAGTGCGGTG Gene BVT0102_262422 + 0 NULL GK000027.2:25432328-25448499 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00155286 TCONS_00155291 TCONS_00155285 TCONS_00155287 TCONS_00155288 TCONS_00155290 1 XLOC_094687 Coding TCONS_00155291 XLOC_094687 Coding Coding LEPROTL1 27:25426881-25434308 j TSS116218 2703 1 TCONS_00155291_2 158 4 0.636547266361433 0.000302112850831237 1.18668551154823e-05 0.000281718680093479 0.000108557369418619 4.83395143405715e-05 0.000107353005459339 6.48828915961215e-05 0.000154223856871886 0.000104259246760362 7.35514853221976e-11 2.07768666106667e-05 6.11200598059262e-06 9.45504655453452e-89 4.48310096365766e-06 6.36185389044863e-05 0.00124590415338762 0.000177053519265834 1.69627496489225e-09 0.000143652623747668 2.73248138936934e-05 6.79205678055903e-22 0.0016504674875604 0.00106528346509333 0.00239880473591118 0.000114809451963153 2.0373837002781e-26 0.000184095928528741 0.000164720784700067 3.132746241969e-05 6.08719698831701e-09 XM_005226040.1 LEPROTL1 PREDICTED: Bos taurus leptin receptor overlapping transcript-like 1 (LEPROTL1), transcript variant X1, mRNA. 0.0 1687 100.00 0.345541990381058 NM_015344.2 LEPROTL1 Homo sapiens leptin receptor overlapping transcript-like 1 (LEPROTL1), transcript variant 1, mRNA. 0.0 1862 81.55 0.714391416944136 TCONS_00155291_2 sp|Q32PD8|LERL1_BOVIN LERL1_BOVIN Leptin receptor overlapping transcript-like 1; 3e-86 253 99.21 0.79746835443038 1 noncoding 1 0 1 1 -0.346372250947195 0.0233936914969257 0.0194266013525932 0.770569072822985 GTGGTTGAGAGAGCCGCTGACTTCCAGGAGGGGAAAGAAGGCCAGTACAGATGCAGAGGCCAAGGGGTGCAGCCTGGGGTGAATGCGTGTCCTCACAAGCAAGCAAGACCAGCTTCCGAGGACCTGTCTTGAACTGGACAAAACATGCTTTGATTAGCTTGTCCTTTGGAGGAGCAATTGGACTGATGTTTTTAATGCTTGGATGTGCCCTCCCAATATACAACCAATACTGGCCCCTCTTTGTTCTGTTCTTCTATATCCTTTCACCTATTCCATACTGCATAGCGAGAAGACTAGTGGACGATACGGATGCTATGAGTAACGCCTGTAAGGAACTCGCCATATTTCTTACAACAGGCATTGTGGTCTCAGCTTTTGGCCTCCCTATCGTATTTGCCAGAGCAAATTTGATCGAGTGGGGAGCTTGTGCACTCGTCCTCACAGGAAACACTGTCATCTTTGCAACTATCCTGGGCTTTTTCTTGGTCTTTGGAAGCAACGATGACTTCAGCTGGCAGCAGTGGTGAAAGGAATCACTGAACTCTTGTCACATGGACTTCTTGTCATTTCTCGGCCGTCCGCGCACACAGGAGACAGGGCAGTGATGCTGAGCAGTGGAGCAGGCCTCTCGGGGGTGTTCCAGGTGCTCCCTTCTCACTTGTATTGTAAGCATACTATTTTCACAGAGACTTGCTGAAGGATTAAAAGGATTTTCTCTTTTGGAGGAGCTTGACTGATTTCACACTTATCTCTAGTATGCTTTTTGTGGTGTCCTGCTGATTTTAAAATATTTATGTGTTTTTCCTGTTCAGTTTTTTTTTTTTAATCAATATGCAATGTTAAACATTTTTTAAATGTAATAACCATTTGCATTGGTTAGGCATTAGAGTTCTGCTGGCTACTACTGGGCTAAATACATTTTTTTTCCCTTAAAATTGTTTAACCTCCATTACTACACATAGTTATAAAAATAAATTTTTCATTCAGTCAGGATGACATCACTCCCAATTTTATGCAAACATGCAGACCATTAGCATACCTTATAGACTATATACTCAATGCAAATCTAGCTGCATTTATACCTCAGAGGGGCCAAGTGTTAATGCCGTGCCCTCCATAATAGTTGCTGGTTTTGCCAGAAAGCAGGTGTTTTGTGAATTGAAAATTATTTTATGGAATTGTTGCAAAGGAGTGCTTTTATTCTCAGTTGCTAGAAGAACTTAGGGTTAAAGGTAAGGGTGTAAAAACAGATTTTTGAGACATGGTTTTTATTTATGTTTATTATAGTTAGAGTGAGTTGCATGGCAGGAAGAAACGAGGTTGAAATTCCATTTTTTAAAAATCCTGTTTCTATTTGTAAGTGAAATTTTTGATCTTTCAGGCTTTCATGTTTTGCGTGGGTAAAGGGACACACGGGGAACTGTACTGACACTGGAAGTATGTTTGCACCCTACGTACTAGAATACCTCCTCCTGCTTCCTCCTTGTGACTGACTTTATACACTGTATGTATTCAGTAAAGTGTGTTTTCCCATTCAGTTTAGTAACACCTTAAATTAGAGGTGAGTGCTCTGCCATACATTCAGAGTGTCCCTGCCCCACACAGAAGGCCTTGAGGTGATTAAAGTGACTTCTTAGTCTTGCCAGTCATATATTAACACCTTAAGATCTAGAACATGGGAATGGTAGTACTTATTCCCTAAGGTTGTAGCATACGTGTTTTTACAATACTTAAGACGAGTTTCCTGTGTACTTCTCAACATTTTTTTTCTTTCACCCTCAGAGATACACTGTTTCCTTTTATAAATGGCCTTGATTGTGTGAATTCATGCAAAGCAGCCCAGTCCAGCTGTGTGGCAGCTTGAGAGGCAAACCTGACCCTCAGATTCCCAGTAACCAGGCATGATCAAGTTGTCGTGGTCACTCACCTCTCCCGCAATGATCAGTGTTTGTTTCAGGAGTTTTGAAAATAGTCCAGGTCTGACAGTATTTTGTTAAGGACATTTGTTTGTATGTTTATTCAGTATACTTACTTAAAAATCTGTTTTGGCTTCAGATGAAACAGTAATCACAACAACTATTTCGTATGTTTATTCAGTATACTTACTTAAAAATCTGTTTTGGCTTCAGATGAAACAGTAATCACAACAACTATTTCATTCTATAAAGTTGATTTCTCAAAAAAAATGGGAACAGATTGTGGGTTTATTCAACTTTCTACTAGAGATGCCTCAAGGCTTCTTTGCCCAACCCAAGTTTTTACTTTGAGCCGTGAGATGGGCAGCAGGATGAAATGCCGGCGTGTGGCTGTCGCATCTGCACACAAGCTGAGGGCGGCTTGCGGTGTCACGAGGTAGGCCTAAAGACAAAGGGACAGCTGCTCACGGAGCAGGCAGCTGGAGGTAGAGTTGGGAACTCAGTGCCTGTGATCTACTCGAGTTTTTCTTTTTGCCAAAAGTACGGTCTCTGGTCCTTCCCTGTTTTCTGTTCTAGAGTGTCAGTGCGGTGCACTGCTACTGTCTTATTTCCTTGGCCGTAGACTCTTTTTCTAGCAGCTGCGGATTTCTTCTGTATAATAATCACCCTGGCAGCATTGTGTCTTTGACCTTGCACACTAGCTTGACATAGTGCTGTCTCTGATTTCTAGGCTAAAAGTACTTGAGGGCTGAATTTTCCATAGAATGTGCACTGACCCTGCATTGNN EMBV3_02922 AGCTGCTTTGGAGAAATACCACGAAGGCATTGAAAAGGCAACAGAGGACTGCCATGCTAA Gene GeneID:519504|NUF2:NM_001099011:287_cdna Constitutive 0 NULL GeneID:519504 3 GENE NUF2 MGC166137 NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae) EMBV3_01984 GACCCCTGGCCCAAGGACACCTCATCCAGGAAGCGGTTCGGAAGAGGCAGTTCTATTAAA Gene GeneID:515437|SLC39A14:NM_001098036:85_cdna Constitutive 2 NULL GeneID:515437 8 GENE SLC39A14 MGC155096 solute carrier family 39 (zinc transporter), member 14 EMBV3_37404 AGATGGATGAAGCGGTCTCAGAAGAGAAAGCATGAAGCCTCTCGCGGCCCACAGCCAGTC Gene GeneID:516891|FA2H:XM_002694708:148_cdna Constitutive 0 NULL GeneID:516891 18 GENE FA2H NULL fatty acid 2-hydroxylase EMBV3_33341 GGGATGGTCTTGGAAGTAGCTGGAGTTTTGGGCTGGCAGTGTTTGCCTTGGGGATAACAA Gene BVT0102_097313 + 0 NULL GK000007.2:47273459-47352222 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00220923 1 XLOC_134239 NonCoding TCONS_00220923 XLOC_134239 NonCoding NonCoding - 7:47342026-47342792 - TSS164921 766 1 TCONS_00220923_2 68 0.356396866840731 1 0 0.000692718346019461 1.31180681508305e-05 0 0 0 4.66978877595589e-06 0 0 0 0 0.000245056367209229 0 0 0.000221075115466485 0 0 0 0 0 0 0 0 0 0 0 0 0 3.7618146103499e-05 6.33762489277423e-06 2.35466771564607e-05 XR_232352.1 LOC101904240 PREDICTED: Bos taurus coiled-coil domain containing 3 pseudogene (LOC101904240), misc_RNA. 1e-17 95.1 78.05 0.14490861618799 NM_001013741.1 Ddn Mus musculus dendrin (Ddn), mRNA. 2e-21 107 82.30 0.142297650130548 0 noncoding 0 0 0 0 0.0762453756474755 0.563722605420006 0.0362821141171494 0.684790461267586 GTTTGAGCTGTGTGACCTTGGGCGAGTCACTTCCTCTCTCTGGGCCACAGTTTCCTCATCTGTAAAATGGGGTTAAAAGAGCTACCTCTCAGGGTTGTTGTAAGGATCAGATGAGATAATAGAGGGGAAAGAGTTTTGTAAACAGTGAAGTACCATGTCTGGAGATATTCTGGAATCTAACACATATTTATTGGACTTCAGCTCTCTGCTAGGCCCTGGCTCAGTCCAGGGCACACAGTCATGAGCAAGAGAGAGGAGTCCAGCTGGGACAAGAGAAAGTAGGAGTGAGCAGGACACCTTGGGCCCATAGCCCTGCACCACCCAGAGAGGCTGTGTTCTTGCCCAGCTCCTGTCCCTTGTCCCTGGAGCTTGTCTGGTGTGGCATGGCTCCCTTGGCATTGTTATCCCCAAGGCAAACACTGCCAGCCCAAAACTCCAGCTACTTCCAAGACCATCCCCTCCACCCACCATGGAGATTACTCGGCTGAAGGAAGCAAGGCTGTAATTTGTCATCAAAGTCACCCAGCAATGTTTCCACAAATTAGTCAGATAAATCTCTCCCAGGCAGCAGCCACGAGAGGGGGCTTCCTGCCTGAGCAAGGTGGATGGGGGTGGGGGGACACCTCTGACCCCTTCCTGCCAACTCATCTGTTGTTACCCTGTTCTCGTTGGCACTCTACCTCCCTAGAGGGGCTGCAGACCTGTGGGGGACTGAGAATCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCCGACTCTGTGTGAC TCONS_00213255 TCONS_00213256 TCONS_00213257 TCONS_00213258 . 5' 9431 TCONS_00213255 TCONS_00213256 TCONS_00213257 TCONS_00213258 . 5' 9431 EMBV3_41743 CCGACAAGAAGATTGAAGGGGAAAAGCACGACATGGTCCGGCGTGGAGAGATCATAGACA Gene GeneID:282421|CTNNBL1:NM_174637:754_cdna Constitutive 0 NULL GeneID:282421 13 GENE CTNNBL1 MGC137501 catenin, beta like 1 EMBV3_29805 GGCCTCCCCAGACAGCCATTTTGCTTTTTTTGCATTTCTTTCCCAGGGGGATGGTCTTGA Gene BVT0102_029183 - 1 EMBV3_24689 GK000029.2:5133431-5175375 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00109111 TCONS_00190179 TCONS_00238479 TCONS_00117548 TCONS_00197427 TCONS_00070849 TCONS_00229757 7 XLOC_065016 XLOC_116214 XLOC_145146 XLOC_071714 XLOC_119088 XLOC_042626 XLOC_139251 NonCoding TCONS_00190179 XLOC_116214 NonCoding NonCoding - 4:110124800-110126425 - TSS142547 1625 2 TCONS_00190179_2 68 0.998153846153846 1 0 0.000176126488718107 0.000166958588106425 0.000132751417044468 0.000143597506633198 0.000168731475196512 1.65094720792956e-05 0.000126981187526864 0.000280266835038769 4.7745515915013e-05 6.32998664807979e-06 0 0 5.29711983524711e-06 8.04101816862515e-07 0.000116700615890568 0 0 2.57342546113627e-06 6.17802334814661e-05 8.40844382806031e-05 8.21982259472146e-05 0 1.12911389385734e-06 5.15836228231951e-06 0.000134737192322579 7.87648073169611e-05 2.97463828503284e-05 0 2.48953951242049e-07 0 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1103 91.65 0.473846153846154 0 noncoding ATTTCTCCCAGCAATCTTGATTCCAGCTTGTGCTTCTTCCAGCCCAGCATTTCTCATGATGTACTCTGCATATAAGTTAAATAAGTAGGATGACAATATGCAGCCTTGACGTACTCCTTTTCCTATTTGGAACTAGTCTGTTGTTCCATGTCGTTATAACTGTTGCTTCCTGACCTGTATACAGGTTTTTCAAGAGGCAGGTCAGGTGGTCTGGCATTCCCATCTCTTTCAGAATTTTCCACAGCTTATTGTGATCCACACAGTCAAAGGCTTTAGCATAATCAATAAAGCAGAAATAGATGTTTTTCTGGAACTCTTGCTTTTTTGATAATCCAGTAGATGTTCACAATTTGATCTCTGGTTCCTCTGCCTTTTCTAAAACCAGCTTGAACATCTGGAAGTTCATGGTTCACGTATTGCTGAAGTCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCATGTGAGATGAGTGCAACTGTGTGGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGAGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAATGCAGCACTTTCACAGCATCATCTTTCAGGATTTGAAATAGTTCAACTGGAATTCCATCACCTCCACTAGCTCTGTTCGTAGTGATGGCTTCTAAGGCCCACTTGACTTCACATTCCAGGATATCTGGCTCTAGGTGAGTGATCACACCATCATGATTATCTGGGTCATGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTTTCCTTTATAGAGCCCATCTTTGCATGAAATGTTCCCTTGCTATCTCTAATTTTCTTGAAGAGCTTTCTAGTCTTTCTCATTCTGTTGTTTTCATCTATTTCTTTGCATTGATCGCTGTGGAAAGCTTTCTTATCTCTCCTTGCTATTCTTTGGAACTCTGCATTCAGATGTTTATATCTTTCCTTTTCTCCTTTGCTTTTCGCTTCTCTTCTTTTCACAGCTATTTGTAAGGCCTCCTCAGACAGCCATTTTGCTTTTTTTGCATTTCTTTTCCATGGGGATGGTCTTGATCCCTGTCTCCTGTACAATGTCACGAACCTCAGTCCATAGTGCATCAGGCACTCTATCTATCAGATCTAGTCCCTTAAATTTATTTCTCACTTCCACTGTATAATCATAAGGGATTTGATCTAGGTCATACCTGAATGGTCTAGTGGTTTTCCCTACTTTCTTCAATTTCAGTCTGAATTTGGCAATAAGGAGTTCATGATCTGAGCCACAGTAAGCTCCTAGTCTTGTTTTTGTTGATTGTATAAAGCTTCTCCATCTTTGGCTGCAAAGAATATAATCAATCTGATTTCGGTGTTGACCATCTGGTGATGTCCATGTGTAGACTCTTCTCTTGTGTTGTTGGAAGAGGGTGTTTGCTGTGACCAGTGCATTTTCTTGGCAAAACTCTGTTAGTCTTTGCCCTGCTTCATTCTGTATTCCAAGACCAAATTTGCCTGTTACTCCAGGTGTTCTTGACTTCCTACTTTTGCATTCCAGTCCCCTAT TCONS_00182808 TCONS_00182809 TCONS_00182810 . 5' 770975 TCONS_00182808 TCONS_00182809 TCONS_00182810 . 5' 770975 EMBV3_09762 TCCTGCATTGTGGGCAAATTCTTTACCGCTGAGCCACCAGGGAAGCCGATAAGGACCATA Gene BVV0102_268343 + 1 EMBV3_26047 GK000006.2:67069075-67147449 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36867 ATGAAGAAACATAGGCTTGGGACTTCTCTGTGGTCCAGTGGCTAACACTCCAGGCTCCCA Gene BVV0102_203431 + 0 NULL GK000005.2:24537336-24846219 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198022 1 XLOC_119679 NonCoding TCONS_00198022 XLOC_119679 NonCoding NonCoding - 5:24799947-24800322 - TSS147590 375 0.541333333333333 1 0 0 0 0 0 0 0 1.55512530827343e-05 0.00154571819493897 0 0 0 0 7.6514038186714e-06 0 0 0 0 0 0.000210348026639144 0 0 0 0.000122320581467205 0 0 0 0 0.000256137568861011 3.88368746782138e-05 0 XR_231207.1 LOC100297676 PREDICTED: Bos taurus C-type lectin domain family 2 member H-like (LOC100297676), misc_RNA. 4e-20 102 84.38 0.250666666666667 0 noncoding 0 0 0 0 -0.74091157600969 0.0643483959638101 0.0440307849619404 0.352270422715316 CAGACATTTTAATAACACTCAGGAGACATAAAATGCAGGATCATTAGTTCATTGGAAGATGAAGACTTGGGGAATTAAAATGTTTCTCAAACATAAATTTTCTAGTAAATGAAATCCAGAAATCAAACTTCCTATGTGAGAGGAATCGCTCAAAGCAAGTAACAAAACCTTCTGAGACAGATGTCATTTTTTCCCTATTTCACAGATGAAGAAACATAGGCTTGGGACTTCTCTGTGGTCCAGTGGCTAACACTCCAGGCTCCCAATGCAAGCAGGCTGCATCCGATCCCTGGTCAGGCAACTAGAACCCACATGCCACCACTGAAGGTTCACACGCCGCAACCGAAGATTCCATGTGCTGAACCAAAAGATCCC TCONS_00194166 . 5' 43906 TCONS_00194166 . 5' 43906 EMBV3_40771 TCATCATTGGGTTCACTTCTAATAATTGCAGCGCTTCCTGCTTTGGGCTTAGGAGAAGCC Gene GeneID:526848|CTNNA1:NM_001035366:253_cdna Constitutive 0 NULL GeneID:526848 7 GENE CTNNA1 MGC128363 catenin (cadherin-associated protein), alpha 1, 102kDa EMBV3_31125 ATTTGTGCAAGTGTTCTGACTCTCAGTGTTGTGTCCAGAGTATGTTTTTCCACAATGTGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01607 CCAACACAGACCTTCCGTCCTTCTTAGGTCTTCCACTCAGGCACCAATAAAAGGAGCAGT Gene BVT0102_055316 - 1 EMBV3_38085 GK000022.2:54252164-54259647 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00129156 TCONS_00129155 TCONS_00129154 1 XLOC_078049 Coding TCONS_00129155 XLOC_078049 Coding Coding SACM1L 22:54199057-54254123 j TSS96142 5441 1 TCONS_00129155_9 554 0.0602830362065797 19 0.901534550077182 0.00157204195022591 0.000869954560560045 0.000248654703265955 0.000510000833445041 2.07061874613815e-05 6.79415396816137e-08 0.000643554270957958 7.90677512835065e-05 3.9664718491576e-05 6.79239222134386e-06 2.41559869874945e-193 9.75603230611386e-05 2.49536428472211e-05 6.9903044602234e-06 0.000294328743875617 1.00688515924792e-11 4.99348399352703e-09 1.21022647821021e-05 0.00127214240134618 0.00157069694915179 8.09415934588963e-08 0.000378386801434125 4.58938852566809e-31 1.59793530067225e-05 0.00139245920160749 0.00149717607195366 0.000482552093122382 1.28820896829981e-126 4.69644799213396e-66 1.34687213933612e-79 NM_001102131.2 SACM1L Bos taurus SAC1 suppressor of actin mutations 1-like (yeast) (SACM1L), mRNA. 0.0 4251 99.75 0.435765484285977 XM_005264965.1 SACM1L PREDICTED: Homo sapiens SAC1 suppressor of actin mutations 1-like (yeast) (SACM1L), transcript variant X1, mRNA. 0.0 2327 82.00 0.435581694541445 TCONS_00129155_9 sp|A6QL88|SAC1_BOVIN SAC1_BOVIN Phosphatidylinositide phosphatase SAC1; 0.0 1141 94.38 0.998194945848375 1 coding 1 0 1 1 -0.0184308683514369 0.900260374886057 0.00330596831891559 0.975270950301617 CTGAAGAGCATTCAAGGAAACTGATGCTATTGATGGAAATGTGTATCTAGTTTTTTGGCAGGCAATGTGAAAATATGTACCAAAGTATTAAAAACATCCATGAAATGGACCTTAAAAACATATGTCTGATGGTTCAACATCTAAAAACTTTTAATACATATCAGAAATAATTCAACTCAGCATTATATTTTTAAGTATTAAACTGATGATTCAAATTCCCAAAAAAGGTTAATATTTGAAATATATAGTTTTTTCACGGGCTATCTTCAAGGAATATTTAATGACCATAAATCTCAGACGAAAGCTAAGGGAACAAAATGAGAACATTTGTCAAACAATCTCAAATTTGGAAAAAATACTTGAGGTTTGACAGAAAACAACAAAATTCTGTAAAGCAATTATCCTTCAATTAAAAAAGAAGATTTGGGAAAAAATACGTGTATAGGTTTATTTATATTAAAAAGTATGGAAGAAGTCCATAAGGAAAAATTATGACGCTGATAGTAATGAGGAGGAATTACGACGTTAATAGTAATGATCTCGTGATGGGAATTTGGATTTTTGTTTTGAATTCCCACTACTTTCCTGTATTTTACAAATGTCTTGTAATTTCTTCAGGAGGAAAAAACGTATTGGAGCGTTTAACTGATCGATTGAATGATTAGTGAATGGACAGTGTCAGATGTTACGTTTCAGGTTTCACTCTCATTTCCAACACAGACCTTCCGTCCTTCTTAGGTCTTCCACTCAGGCACCAATAAAAGGAGCAGTAATATATTAGGTAACACCCTCTGAAAGGACAGGGCTGCAGACCCCGAGCACTTTGCGGACCCCCAGGCGACTCGCGCAGTCGCACTGCAGCGTTCCCGCCTCCGCTGCAGCTTAGAGCTCGCCGGATCCCGGGAAACGGACTGCGCGGCTCTTCGCGTCCCCGCGGGGGTTTCTGCTCCACAGGAAATAGGGCCAGAATCTCTGCCTTAAATGCGCAGTTGCGTCATCCGCTAGCTAACCTCCTACCACAGCACACCCTCCACCCCGCAACTACCACCATCCTAGCTGTGTTTTCCTAAATGTATCCCGTTTACAGAGTCTCCTCGTGTGCATCATTAATTAGGGCACTTTGCAATTTACAAACCACCTGAGACAACTCCGGGTTCCAAACCCAGCTCAACAGATGACGTTTCGGACAGAGCAGGCTTAAGGAAATCAACCCCGAATATCCACTGGTAGGACTGATGCTGAAGTTGCAATACTCTGGCCACCTGATGCGAACAGCCGCCTCACTGGAAAAGACTCTGATGCTGGGAAAGACTGAAGGCAAAAGGACAAGGGGGCAGCAGAGGATGAAATATCTCTGACTCGATGGACATAAATTTGAACAAACTCCGGGAGATAGCGGAGGACAAGGGAGACCGGCCAGCTACAGTCCATAGGGTCGCCAAGAGTCGGACAAGATGTAGCGAATGAACAGCAACACAACAAGCCTTAACATTCGAGACATTTACCCTTCTGACGAGAGTCCTTGCTAAGGACACCCCGTTAACATCAAGCCCAGACACGACAAAAAGTACACCTCGAGCCAGCCAGGAGTCGAACCTAGAATCTTCTGATCCGTAGTCAGACGCGTTATCCATTGCGCCACTGGCCCTGTACAAGTTAGCCTTGCACTGGAGCGCAGATCACGCCTTACGCACCTAACGACAGGCTCCACGACATTAGCGCTGCATTTCCGACGCTCGGCCGGGCTCTGCGTGATTCGGGTCTGCAAGCTCCCAAGGCTCCGCCTCTCCCAGCCAACGCGCTCAGCCAATCCTCAGCCGCTACGTCACCGCGCTCTTCCTCGCCCTCACACGGCGTCGCGTCGGAATGTGCGCCTGTGGCGCTCAGTGCCCGCGCACGAAGTTTGTCCAGCGCCGCGTCCCGTTTTCTCTCTCAGCCTGGCGGGGCGGGGCGGTGGGAAGAGGCTGGGACCTGCGGCCGCTGTAGGAGGGTGACCGGTATCGCTGGAGCCGAGGTGGCGCGGGGCGGCGCGGTCGGAAACCTAGGAGGGAGGCTGTGGTGCAGGATGGCGGCCACGACCTACGAGCGGCTGAAGCTGCATGTCACCCCTGAAAAATTTTATGTGGAAGCTTGTGATGACGGAGCAGATGATGTACTTATCATCGACCGCGTGTCCACAGAAGTTACGCTCTCAGTCAAGAAAGATATTCCTCCTTCAGCGGTTACGAGACCAATATTTGGTATACTGGGCACAATCCATCTGGTGGCAGGTAATTACCTAATTGTCATTACCAAAAAGAAAAAAATAGGTGAATTTTTCAATCATGTAATCTGGAAAGCAACAGATTTTGATGTCCTTTCTTATAAGAAGACGATGTTGCACTTAACTGATATTCAGTTACAAGATAATAAAACTTTCCTAGCAATGATGAACCATGTCTTGAGTATGGATGGGTTTTACTTTTCAACAACATATGATTTGACCCATACTTTGCAGCGGCTCTCCAACACTAGTCCAGAATTCCAGGAAATGAGTCTCTTGGAAAGGGCAGATCAGCGGTTTGTATGGAATGGTCATCTTCTCCGAGAACTTTCTGCTCAGCCAGAGGTCCATCGGTTTGCCCTTCCGGTATTACATGGCTTTATTACCATGCACTCATGTTCTATTAATGGAAAATACTTTGATTGGATTCTCATCTCGAGGAGGAGTTGTTTCAGAGCTGGTGTGCGCTATTATGTGAGAGGAATTGACTCCGAAGGCCATGCAGCTAACTTTGTAGAAACAGAACAAATTGTGCATTACAATGGGAGCAGGGCTTCATTTGTACAGACTCGAGGATCAATACCACTTTACTGGTCTCAAAGACCAAACCTCAAGTACAAACCATTGCCACTGATCAACAAAGTAGCAAATCATATGGATGGTTTCCAAAGGCATTTTGATTCACAAATAATTATTTATGGAAAACAAGTCATAATCAATCTGGTAAATCAGAAGGGCTCAGAGAAGCCGCTTGAACAGGCGTTTGCAACAATGGTGTCTTCCTTGGGGAACGGAATGATCAGTTATTTTCTAGTAGACCCAGCCGGCGTGGTGCTGAGTACCCAGGAGGGCGTGTTCCGCAGCAACTGCATGGACTGTCTGGACCGAACCAATGTGATCCAGAGTCTGCTGGCTCGCCGTTCACTTCAGGCCCAGCTTCAGAGACTAGGAGTTTTGCACGTGGGACAAAAGCTCGAAGAACAAGATGAATTTGAGAAGATTTACAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAACAGTACGCGGGAACCGGCGCCTTGAAGACGGACTTTACCAGAACTGGGAAGAGAACTCAGTTGGGACTTATAATGGATGGCTGGAACTCACTAATACGGTATTACAAGAACAACTTTTCTGATGGATTTAGACAAGATTCCATAGACTTATTTCTTGGGAACTATTCAGTGGATGAATTAGAATCTCATAGTCCTTTAAGTGTTCCAAGAGATCTGAAATTCCTGGCTCTGCCTATCATCATGGTTGTTGCCTTTTCCATGTGCATTATCTGTTTGCTGATGGCTGGTGACACCTGGACAGAAACACTGGCCTATGTGCTCTTCTGGGGAGTCGCAAGCATCGGAACATTTTTTATTATTCTTTACAATGGCAAAGACTTTGTTGATGCTCCCAGATTGGTCCAAAAAGAAAAGATAGACTGAATTTGTGTCTGTGGAAAGCGGCTTGGCCTGGAAGATTCCATTATGCAGAACTGGAGTCTTTACTGACCCGCTTTCCACGGCAGCCGAGGTCTTTGTAAATCGTTTATCCAGGAACACATCTTGTGCTGGGTGTGGGGTGATGACTTAGAGTTGATCTGGTGTTAACTGCCTTGATGATCTCTTTACTGTTGGGATAGTTATATTTACAATTTGAAGCTAGTCTATAATTAAAATGTAACCTGAATTCAGCTCACAGAATGGAAGGAACCTATACATCGTCAGTTGAATCAGCCATTGCAGAATGAGTAATATATTTAAAAAATCTAGCTTCTTCCCTCATTTGAAACAGTGAAATTATTTTTGTAGCTCAGTTTATGGTCACTGTAAAAGCAGTTGCTATTAGCAGGCTTACTTTTCCATATACCTTTGGACTTTTCTTAACAGCTTAATGATAAGCTAACTAGTCTGTTCATAACATGTAAATCTACATAGATCAGGTAGTTGGACGAAATCGTCCATGACTACATAGCAGGAAGGAGGTGTTCCTCTCGAGTTCTAGTTGGACCGCCTTACGAGTTCAGTCAGTTTGAACTGTGCAGTTTAAGTGTGATGAGAAAAGTTTCAGATGTACTCTATCTTTTTTAAAAGGTGTAAATGAAATCAGCGAATGTAAAGTCTATTCCTCATGCTAGAGGTCCAAAGCCGCCTCGGTCTTCAGGATTGCCCTGGTGTGGGAGCAGCCGCGGTTGGTCAGCCCCTCCCTCCTGGCCCCTGTTCTTTCCTGGGTCTTTCTTCAAGACATGCAGGTCCCTGAGCGCGTCTCATGCCGAGTTCTGTGTTGCCCTTGGAGGCAGCAGCTGCTTGTGCACACACGGCAGTGTTGGCGCTTTTCACTCTGTGATTATTTTTGTTGCATCAGTAAGTGTGTCTGAAATTCAGTGCTTCCAGGTAGTCATCGCTCTCCAGATCAAGGACCAACTGACAGCTTTAATTTATGTGCAGAAATAAACCTGAAAAATACGCTTTAGAAGCTGTGCATAGTTCTAATTAATAAGTCGGAAACTGTATATTGAAATTGTAATTATGAGGTTTAAAAACTAGGAAGTATCTAAGATAGTGTAATTGCCATTATTTTATAATAGTTCGATTAAATACCGCTGCAATATTTGTGTTGTGGTTGAAAATTATGTACAGTTTTTTTTTTCCAATGGTAATACCTTTTGTTGTCCTTAAATATCTCTAAAAAGCGCCTTGATTTTAACATCACCTTTTTTCCCAACATTATCATTTATAAACATTAATAAGAGTTGTTGCTTTTAGAAACTCTAAAGGAAATAATAGCTGGAAAACCCTCTGTAGCTTACAGTCAGTCATTAACACTCACAATAGGGTAAGTAATTAGAACTGCCTACTCTTAACTTGTAAATAAGCATCATTTGTTCCAAAGAGAAAATATCAAAACTCGGTTTATGTCTACTGTGATGGATCGTCAGATGCTGCTGGGCATTTCACATTAAGAACTTATTTCAACAACCATGACAAAGACCAAATCTGAATGCTAATGTGGCTGTTTTGCAGTGAATGGGCTAATGTTGGTGTGTTAGACCTTGAGGTGTCAATATTTCAGAAACCTGCAGTAATTTTATTCCTAAATTTATGTACTGTCTCATCTGTAAGTGAAAATAAAATGACATATTCTTTTCTAACTAAT EMBV3_23403 GGCGGGGGTGGGGGGCCATTTTGTCACTGTGCCTCAGTTGAGCATCTAGGAAGTATTAAA Gene GeneID:535225|LIMK1:XM_002698184:703_cdna Constitutive 0 NULL GeneID:535225 25 GENE LIMK1 NULL LIM domain kinase 1 EMBV3_31442 CAGCAAGCAAATCTATCAAAAGAGAACCCAGCCAGGCAGATAGACCCCTGAATGACCAGG Gene GeneID:514525|CBS:NM_001102000:29_cdna Constitutive 0 NULL GeneID:514525 1 GENE CBS MGC179463 cystathionine-beta-synthase EMBV3_23515 AATGCTGCGTTGTCTATGGACGGAGATGGACCATGTGCCCTTCGGAGTTAGGGATAGAAA Gene GeneID:539627|TNIK:XM_002684922:56_cdna Constitutive 0 NULL GeneID:539627 1 GENE TNIK NULL TRAF2 and NCK interacting kinase EMBV3_28085 ACACAACTACACGGGACTTGGTGTACAGGGACCCAGCAAGGCCCAACATTCAGAAAACAT Gene GeneID:787432|LOC787432:XM_002693490:129_cdna Constitutive 0 NULL GeneID:787432 15 GENE LOC787432 NULL similar to Follitropin subunit beta precursor (Follicle-stimulating hormone beta subunit) (FSH-beta) (FSH-B) (Follitropin beta chain) EMBV3_35892 AGCAAATCTGGCCTCTGTTATCATCAGAGTGCTCACACTGGAGAAAGGCCTTATGAGTGT Gene GeneID:100139325|LOC100139325:XM_002695507:304_cdna Constitutive 0 NULL GeneID:100139325 18 GENE LOC100139325 NULL similar to zinc finger protein EMBV3_16952 GACAGTTTGAAAGTACAATAGTTGGTTTCCCTGACCACCCGACCCCGCTGCGTTTGCCAT Gene BVV0101_061371 + 1 EMBV3_34771 GK000009.2:24365793-24489458 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00239368 1 XLOC_146034 NonCoding TCONS_00239368 XLOC_146034 NonCoding NonCoding - 9:24446599-24447308 - TSS179046 709 3 TCONS_00239368_2 52 1 0 9.59500084476871e-05 1.41726948481568e-05 0.00010441737857726 4.68499840723641e-05 6.26722237090612e-05 0 0 8.34234245755058e-06 1.11285333468118e-05 0 9.6862519001717e-06 0 1.61877585877272e-05 0.000663468956896796 0 3.72518898169316e-05 4.68328837484679e-05 3.53891501460228e-05 7.07991194054919e-05 0.000324577519742756 4.70987619306624e-05 0.000387257280346163 0.000465818337465026 0.000141872853072358 0.000302937224018038 0.000149057871293118 3.30558007763224e-05 5.41899979200544e-05 6.84712816362773e-05 6.78391325665773e-05 NM_001076034.1 RSPO3 Bos taurus R-spondin 3 (RSPO3), mRNA. 0.0 780 100.00 0.607898448519041 XM_005267167.1 RSPO3 PREDICTED: Homo sapiens R-spondin 3 (RSPO3), transcript variant X1, 3e-120 435 80.46 0.668547249647391 0 noncoding 0 0 0 0 0.123876579978103 0.379200332893093 -0.0520791794615215 0.338963334886562 GGCACAGGAGCGCCGGGTCCGCCGGACTATGGCACCCAGGAAGATGCGGGGCAAGAGAGGAGCGGCCGAAAAGAAGGCGTGAAACACAGGAGCCTCAACTGTTACCTCTTCTCCAGGCGTGGGGTGTTGGGTGGGAGGACTGCCGCCGCTGTGAGCCGACTCAAGTTAAGGAAAAGCGACCCGACAGGTGAACGCGGCGGGAGGGAGCAAATGCGTAAAAAAGCCTGCACTTACTTCTTCGCTGGCGCCTTCCCCGGGAGGCGTTTTGGCTGCCGATGTATTCCATAAAGTTCAAAATGATAAAAAACCAAGAAATCAGTCGCAAGTGCATAGTAACCCAATAATGTTTCCCTTCCTTTGCTCCTTTTTTTTTTCTTTTGATTGTTAATTAAGATTGACTGTTTCAGAAATACACGTAGGTGTTAGGCGTATGGAGAGAGCAAGCGCTAACCCCAGCTGCGGACAACTTCTCCACTCAGATCCGACAGGCGAGCCGGGATGGCAAACGCAGCGGGGTCGGGTGGTCAGGGAAACCAACTATTGTACTTTCAAACTGTCCGAGCCCTGAGCTGCGGGGGCTCCCGTGCGGTGGCTGTCAATGCCGCGAGTGAGGGTTCCAGAAGCAGCGAGCGGCCTCGCCAGGGTGGCCGCAGGTAGCATGGTGCGCCGCGGCTGCGCGGGATCCGGGCGGGCGGTGGCGACGGTGGCG TCONS_00236823 . 3' 23231 TCONS_00236823 . 3' 23939 EMBV3_27670 AGTACAGTTTTGCACCCAGTTCAGCCAGAAAGACCAGAAGAGCAAGGGCAGGAGGTGGAT Gene BVT0102_175983 + 1 EMBV3_10770 GK000028.2:13698278-13889607 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00161541 1 XLOC_098429 NonCoding TCONS_00161541 XLOC_098429 NonCoding NonCoding - 28:13873453-13873789 - TSS120873 336 1 TCONS_00161541_1 54 1 0 0 0 0 0 0 0 0 0 0 0 6.81305483850316e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000332309355545564 0 0 noncoding 0 0 0 0 0.0712107816179433 0.528364598351375 0.0229475489953967 0.659392680480273 GCAGTACAGTTTTGCACCCAGTTCAGCCAGAAAGACCAGAAGAGCAAGGGCAGGAGGTGGATCAGAGGTGGGTAGAAGCACAAATTTCCTGGGGCTGTGCAAGGTGCCCAAAGGACTGCTTTCACAACCTCCAGGAGCATCAGAATGAGGAAGCTGGAATGCACAAGGGAGAAAGGAATGTGAGAGGAGCAGCACCTGGGGAGGCCAAGGCAGGGCTGGTGGAGGGCACCCACAGGGCTTTGGACGAATGTGTCCTGAAGGCCCAGACCCAGGGGCAGGGTGGAGCCCGGGCTATGTCTACACAGCTCCTGGATGCTAAATGAGGGCTAGAGAGAG TCONS_00159090 . 5' 15819 TCONS_00159090 . 5' 15819 EMBV3_08359 AAGCTCTCGGATTCTCGCGGCTGAGTTAGGGATTCAACTGCCACCATGTCGAGCAAAAGA Variant GeneID:531505|MYL12A:NM_001015640:140_cdna 68^195 3 EMBV3_02168 GeneID:531505 24 GENE MYL12A MGC139901 MRCL3 MRLC2 MYL9 myosin, light chain 12A, regulatory, non-sarcomeric EMBV3_03163 AAGCACAGCCTGGATCTTTTAAGCAAGGAGAGAGAACTCAATGCCAAACTCCGCCATCTC Gene GeneID:538595|CCDC89:NM_001046432:35_cdna Constitutive 0 NULL GeneID:538595 29 GENE CCDC89 MGC137140 coiled-coil domain containing 89 EMBV3_31181 TTGCTCAGTACGATTTCCCTGGGGGAGAAAGCCAAAGAGGAGGTGAACGTCGTGGAGATC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40879 ATGGCCTAGAGACCAATCTCGCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTT Gene BVT0102_442878 + 1 EMBV3_25435 GK000003.2:86718973-86766526 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00149044 TCONS_00178735 TCONS_00063810 TCONS_00162571 TCONS_00142474 TCONS_00178732 TCONS_00230354 TCONS_00010832 TCONS_00218950 TCONS_00168478 TCONS_00098202 TCONS_00123275 TCONS_00129561 TCONS_00063805 TCONS_00230831 TCONS_00117596 TCONS_00167122 TCONS_00231774 TCONS_00255144 TCONS_00157807 TCONS_00066112 TCONS_00230834 TCONS_00186490 TCONS_00098199 TCONS_00240374 TCONS_00162739 TCONS_00098198 TCONS_00185573 TCONS_00222139 TCONS_00149043 TCONS_00157808 TCONS_00071703 TCONS_00161424 TCONS_00116087 TCONS_00131535 TCONS_00238280 TCONS_00101341 TCONS_00111145 TCONS_00011615 TCONS_00232767 TCONS_00222116 TCONS_00106013 TCONS_00178733 TCONS_00080098 TCONS_00048460 TCONS_00238291 TCONS_00218949 TCONS_00223049 TCONS_00054136 TCONS_00162570 TCONS_00071451 TCONS_00158314 TCONS_00186834 TCONS_00230833 TCONS_00071397 TCONS_00154284 TCONS_00011614 TCONS_00157046 TCONS_00010443 TCONS_00212984 TCONS_00222183 TCONS_00222175 TCONS_00178734 63 XLOC_090921 XLOC_108508 XLOC_038536 XLOC_099452 XLOC_086899 XLOC_108505 XLOC_139844 XLOC_006383 XLOC_132269 XLOC_103118 XLOC_058448 XLOC_074829 XLOC_078274 XLOC_038531 XLOC_140321 XLOC_071762 XLOC_101958 XLOC_141262 XLOC_158076 XLOC_096262 XLOC_040830 XLOC_140324 XLOC_112542 XLOC_058445 XLOC_147038 XLOC_099620 XLOC_058444 XLOC_111626 XLOC_135448 XLOC_090920 XLOC_096263 XLOC_043473 XLOC_098315 XLOC_070256 XLOC_080240 XLOC_144947 XLOC_061582 XLOC_067045 XLOC_007166 XLOC_142251 XLOC_135425 XLOC_062697 XLOC_108506 XLOC_048982 XLOC_028592 XLOC_144958 XLOC_132268 XLOC_136355 XLOC_031945 XLOC_099451 XLOC_043222 XLOC_096768 XLOC_112885 XLOC_140323 XLOC_043168 XLOC_094044 XLOC_007165 XLOC_095506 XLOC_005994 XLOC_130301 XLOC_135492 XLOC_135484 XLOC_108507 Coding TCONS_00080098 XLOC_048982 NonCoding NonCoding - 17:37120691-37121809 - TSS60038 1118 1 TCONS_00080098_2 78 1 0 4.78753310707479e-05 9.4932339466094e-06 3.43843363013195e-05 6.06723695704804e-05 9.08988479709594e-05 6.51622043694459e-05 5.11705138933887e-05 0.000183253491462736 0.000182535013518509 6.81731190344836e-05 6.83946942535167e-05 9.87829255393725e-05 2.67502466787108e-05 0.000166312604361232 0.000148086674799101 0.00241017982236107 0.000337250628166226 0.00122244424164627 9.19664755724166e-06 7.06056940996818e-05 1.47837106007788e-05 0.000312153434511185 0.000488458609486617 0.000555318184846704 2.63112376039151e-05 3.96200823018996e-05 2.60508865532784e-05 6.2278174362547e-05 0.000192546472292626 0.000120648690903383 XR_232281.1 LOC101909710 PREDICTED: Bos taurus uncharacterized LOC101909710 (LOC101909710), 3e-39 167 74.63 0.237924865831843 0 noncoding 1 1 1 1 -0.069690739815313 0.656150057551822 -1.10078665842033 0.00368417958290911 GCCGTCGTACCTCGCGAGAAACCGCACACTGGGGCCGCCGCTCGAGAACAACACCAGAGCCTCCCCCGTCATCGCGACTTGAGGGCCTTCGTCTCCTGTATGGCCTAGAGACCAGTCTCTCGACCTCTCTCCAAACGCCTCAGGAGGCTTGACTCCCTTTAGTCCACCCAGTGAGCTCCAAGAGATACCCGTCGCGACTCAAGAGCAGAGCGGAGTTCTTTGCTTCCACTCGAGATGGATGCCTGTCTCCCCGGGTGTGTCTGGAATGCAACCCCGAGATCCCTTTCGCCCCTGGAGAGGAACATTGGCTTCTGGACACAAGCCTAGATGAGGTCTATTGGCCCTGCAGTCACTGGAGAGCAATCCCCAGCTTTCCTTCGCAACTCGAATGGAAGATTGGACTTCCCTGGGCCAACACAAGAGGCATCCTGAATTCCCCGTCGTAACTCGAGAATCCCGCTGCAACTCGAGAAAATCCACGTGGTTCCCCCGTCATCGCAAGATGAAGCCCTTTCCCGCTACAGTGTCTCAGGAGAAGTCCCACGTTAGGTATTGGAGGTCGAAAAAGGGACTTGGCACCCTTGATGCGACCCACAAAGTGCCCCGACATCCCGGTGACGGTTAAAGAGGAACACCGAGGTTTTCCCGAACCACTTCCTCTGAGCACCCTTCTGCCCTCCTGATCTCGACAGGAGGGTCGACTCCGCTGCTTTGTCTGGAAGGGGTTCCCGACCTTCCGGTCGCACCTCAGGATGAGGCCGGTCTCACGACGACATTCCAGACGTAGCCTCGTGGGTGCTTCCACATTGTGAAGGACCCCGATTTCCCGGTCCCCTCTTGATAAGAACCCGATGCCCGGACACCTCTCCGAACTCCACCCTGTGAATGAAGTCAACACGAAGGGGCAGTCACTCGTCCATGTATCGTCCGGAAAAACCCCCAGGTTCCAAATACTTCTCTATTAGTGGCCTCTCTCCCCGGGGAGACCTCTAGAGATAAGCGGAGTTCCATGCCACAACCCAAGACGAGGCCTGACTCTCCTGTTCCCAGTCTGCAGGGACCCTGCGATCAGAGTCTGAAATCAAAGGAACCCGGACGTTCCTGCCTCTCCTGGAGAT TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 TCONS_00075244 TCONS_00075245 TCONS_00075246 TCONS_00075247 TCONS_00075248 TCONS_00075249 TCONS_00075250 TCONS_00075251 . 5' 27663 EMBV3_13806 CGATTCGGCCGGAACTACTGCAATGCTTCGCCATTGGTGCCCGGAACAACAAATACAAAG Gene BVV0102_327509 + 0 NULL GK000007.2:10122885-10140692 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_04532 TAGACTATGTCACAGGCCCACAGTGATGGCAATTGGTGCTCCCTTCAGCCTGCTCCATCA Gene GeneID:508660|DDX46:XM_002689191:57_cdna UTR3_Alt 2 NULL GeneID:508660 7 GENE DDX46 NULL DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 EMBV3_30711 TAAGCTGTTCAGACAATGAGTGACTTAGAGACCAGTTTGCTGCTTCCTCCCTCGGGCTTG Gene GeneID:525647|MKNK1:NM_001035358:200_cdna Constitutive 1 NULL GeneID:525647 3 GENE MKNK1 MGC133983 MAP kinase interacting serine/threonine kinase 1 EMBV3_43051 CAGTGGCAGCGCTGCTGCTGAGGCGGAGAGGCGCAGATGCGGTGGCGACAGGTCACTACG Variant GeneID:616451|TRMU:NM_001163188:52_cdna 128^400 2 EMBV3_35632 GeneID:616451 5 GENE TRMU MGC133954 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase EMBV3_17127 CGCTACAGTCGCGGCTCCACCCCGGGGATGAAAAGCGAACTCTGCCTTATTGAAAGCTGA Gene GeneID:786215|LOC786215:XM_002686239:263_cdna Constitutive 0 NULL GeneID:786215 3 GENE LOC786215 NULL hypothetical LOC786215 EMBV3_05176 AACGTGGAGTGTGGGGCGAGGCACTTCTGCCACGATAACCAGACCTGCTGCCCAGACAGC Gene GeneID:767942|GRN:NM_001077014:299_cdna Constitutive 0 NULL GeneID:767942 19 GENE GRN MGC127568 granulin EMBV3_25791 GATTGGATCTGGAAAAAGGGTGAGCCGGGGAGCAGGAAAGTGAGAGGAGGGAAGATGATA Gene BVV0102_194758 + 1 EMBV3_34874 GK000019.2:35015403-35024087 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02287 CATGTTTGGTGGCTGGTGTCAAAAGTCCGTAAAGCATTTGCTGCCAAGTTAGTGGAATGC Gene GeneID:519961|ATG2B:XM_002696832:641_cdna Constitutive 2 NULL GeneID:519961 21 GENE ATG2B NULL ATG2 autophagy related 2 homolog B (S. cerevisiae) EMBV3_13890 ATGGCATCCACTCTAAAGGTCCTAGGCTCTCTGTTGGCTCTGCTGTTTCCTCTATGTGGG Gene GeneID:100297646|LOC100297646:XM_002690741:463_cdna Constitutive 0 NULL GeneID:100297646 10 GENE LOC100297646 NULL similar to human epididymis-specific 3 beta EMBV3_37929 CTTAGCTCCAGAGGTGTGAAAGAATGGGAGGCTGGCAAACTAACTGCTGAAATGTGCAGG Gene BVV0102_261243 + 0 NULL GK000021.2:33610471-33625398 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00123746 1 XLOC_075298 NonCoding TCONS_00123746 XLOC_075298 NonCoding NonCoding - 21:33621104-33621833 - TSS92505 729 1 TCONS_00123746_3 155 0.264746227709191 1 0 0 0 0 0 0 0 0 0 0 0 1.8841043839806e-05 0 0 0 0 0.00166657632821591 0.00678666704480486 0.000963710082258808 0 0 0 0.00104846268690692 0.00200092377467727 0.000551923536379865 0 0 0 0.00126487769010031 0 2.74908168640423e-06 0 noncoding 0 0 0 0 -0.0307843159099094 0.86956055728431 0.0253590970654946 0.712159201395361 TATATATGAATGACCTTTAATGAGGAATGCAGGCAAAATTTCACACGAGTGATAGGATCAGGGATTCAGCTTCTAAAATTCAAAGTGCCAGGGGCCTGCCTAGAGTCTTCAAACGTGCCAACCCCAAAACTTACATGCCTCCCTGGGGAAAGGAAGGTCCCAAGATTGATTTCATATTACTTTTCTATTGGGTGGGTTAACGAGAAAGCAAAAGGGAAATTCAGGTCATTACAGAAAAATGAAGTGATGTTCCCTCGCACGTGTTCATTTGTAAATGGAGACCCTGAGTCACTGCAGACCTCGCTGTGCAATGCCACCCTCAGCCTCTTCATCCCTGGGGGGCTGGCGGGACTCACCCCACCCTCACAGTCCCTGCACATTTCAGCAGTTAGTTTGCCAGCCTCCCATTCTTTCACACCTCTGGAGCTAAGATCTGCCAACCCCTCTGGAGTTAATCAAGGTGACTTTAGGGAATGAGGCCAGAGAGCTGGGTTCAAGTCTATCCGCACCCCTGACCCACTGTGTGATCCTAGCCAGGTCGCATCCTCTTTCAGGCCAAGCCTCAGCCTCTTTGTCTGTGAAATGGCATAACTGCCTACCAGGGCTGCCATGTGGACCACGGAGGACGCAACCGTGTGAGACACTGCTTTTTAAACAGACTAGACTGCACTGGGGTTTGACTAACCAAACAAAACCAAAGGAAAAAAGCTTTGCCAAAGCCCAGAGCAG TCONS_00121037 . 3' 2626 TCONS_00121037 . 3' 3354 EMBV3_06887 TTTGGGAGGCGGGCCGTAGAGGATCCTGCTGAGATTTATGTCAGAGAGTATTTTGCCTAC Gene BVV0102_313862 + 1 EMBV3_42015 GK000030.2:118186828-118258768 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20079 AGATTCCAGGCAACCACCACCACGGACCGTGTGACCCTCATCCCACCTACACAGATCTCT Gene GeneID:100295744|LOC100295744:XM_002685305:132_cdna Constitutive 0 NULL GeneID:100295744 2 GENE LOC100295744 NULL similar to homeobox D3 EMBV3_33923 AGCTTCTCACACCATCAAAGAATTCATTCTGGGAAGAAACCATATGAATGTGGGAAGGCC Gene GeneID:100296502|LOC100296502:XM_002694949:75_cdna Constitutive 0 NULL GeneID:100296502 18 GENE LOC100296502 NULL similar to zinc finger protein 347 EMBV3_03440 TCAACAGCTAGAGACCACTATGGAAGGTTTTGTAAGCCCTGGGACCTGGCCATCCTTGGT Gene GeneID:617916|TFR2:XM_002698206:767_cdna Constitutive 0 NULL GeneID:617916 25 GENE TFR2 NULL transferrin receptor 2 EMBV3_25247 GTTGTGTGTCTTACTGGTGGCTGGATCCTGGTTCTTCTCTTGTGTCCATGCCTTGCTGCA Gene GeneID:510731|LOC510731:XM_002683721:8_cdna Constitutive 0 NULL GeneID:510731 11 GENE LOC510731 NULL similar to olfactory receptor Olfr335 EMBV3_26167 CGACGGTTGACGGAGGCCAGGAACCTGAAGGCTGTTTGCCTGTACCATTATTCAATCAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40560 TGCCTTTCGGAACCACCCCCAGTTGTCTCCCATGATTAGAGGCCAAGATGCAGAGATGTT Gene GeneID:100336701|LOC100336701:XM_002687887:74_cdna Constitutive 0 NULL GeneID:100336701 5 GENE LOC100336701 NULL testis-specific Y-encoded-like protein 1-like EMBV3_39248 CTCTGGAGGTCTTCTTACCACCTCTTACTCTTGCAGATTCAAGGAAGCCGAGCGGCAGAA Gene BVT0102_056413 + 0 NULL GK000019.2:61229572-61708768 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01784 GGAGCAGGAGCTGACCCCTCTCTGGAGGCTGATTTAAGTTTGTAGCTGTCCTCTACTCTT Gene GeneID:536622|MMP24:XM_002692306:1717_cdna Constitutive 0 NULL GeneID:536622 13 GENE MMP24 NULL matrix metallopeptidase 24 (membrane-inserted) EMBV3_12137 GACATTGAATTTGGTGGAACAGCAATCATGGCCAAAGAATGCTAAGCAGCCAGAGCGTGA Variant GeneID:780877|SNRPN:NM_001079797:5_cdna 465^616 2 EMBV3_02405 GeneID:780877 21 GENE SNRPN MGC139729 small nuclear ribonucleoprotein polypeptide N EMBV3_40403 GTTGAAATCATGGCAAATGCTAAGAAAATCTAGTCCTCCTTCAACAAATTCTCCTGGGCT Gene BVV0102_396410 - 1 EMBV3_09108 GK000003.2:59033224-59081327 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_01085 TGCTCCCTGTTCCGTACGCTCGCAATCTCAGCTATTTGGAAGCCACCAGGAATGCTTTCT Gene BVV0102_124244 + 0 NULL GK000008.2:96885499-96964124 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00226311 TCONS_00226312 TCONS_00226313 1 XLOC_137980 Coding TCONS_00226311 XLOC_137980 Coding Coding SLC44A1 8:96706684-96887463 j TSS169233 3651 1 TCONS_00226311_2 391 12 0.97987033820487 0.000353195341792755 0.000384484144921508 0.000188656832910724 0.000489498373833488 0.000332056902981289 3.05585041107325e-05 9.2888016553814e-05 0.000102374287705818 0.000303077592534889 7.63577166556349e-06 6.29766502401087e-05 4.71663635337664e-05 2.10751682825421e-05 2.02075377835931e-05 2.81279546469557e-05 0.00629185581633506 0.00144208317124338 0.00384220751467417 0.000327992175960386 0.000255398623598095 7.62218246462269e-06 0.00146553310677505 0.00192097904175382 0.00402697315468269 0.000351995328468238 0.000453474664227604 0.000209103103810404 0.000183523050072603 0.000179901983746818 0.000494832122079118 XM_002689908.3 SLC44A1 PREDICTED: Bos taurus solute carrier family 44 (choline transporter), member 1 (SLC44A1), mRNA. 0.0 5557 99.97 0.844426184606957 XM_005251857.1 SLC44A1 PREDICTED: Homo sapiens solute carrier family 44 (choline transporter), member 1 (SLC44A1), transcript variant X3, mRNA. 0.0 4473 92.27 0.843604491920022 TCONS_00226311_2 sp|Q8WWI5|CTL1_HUMAN CTL1_HUMAN Choline transporter-like protein 1; 7e-169 492 95.97 0.631713554987212 1 coding 0 0 0 0 0.0531565080967301 0.672686868996046 0.0406607297079214 0.490828655387893 TGCTGCAGCTCCGCCTCCTCAGCCGCGCAGAGCTCCAAGCGAGAATGGAAGCCGCTGGAGGACCGTAGCTGCACAGACATACCGTGGCTGCTGCTTTTTATCCTCTTCTGCATTGGGATGGGATTTATTTGTGGCTTTTCAGTAGCAACAGGTGCAGCAGCAAGACTAGTATCAGGATACGACAGCTATGGAAATATCTGTGGGCAGAAAAATGCAGAGTTGGAAGCAATACCAAACAGTGGCATGGACCACACCCATCGGAAGTATGTATTCTTTTTGGATCCATGCAATCTGGACTTGATAAACCGGAAGATCAAGTCTGTGGCACTGTGTGTAGCAGCATGTCCAAGACAAGAACTGAAAACCATAAGTGATGTTCAGAAGTTTGCAGAGATAAATGAGTCCAAGAGGGAATTGATTTGCACAACACGAAAGGCCCTAACTAAAGCATATTGTGTCAGTGCTGTCAAACACACTGCTCCATTTGAATTCAGTGAACATAATCTTCATCCTCACCCTTTTTTCATTTTAAAAAAGGAGCTCAATATCACTTATAACAACTTCACTAAGAGGGATAAAAGGAATTTGCCATTTACACCGATTCTGGCATCAGTGAATCGCCTTATTCGTTATCACCTTGGTACTGTGGCAAAAGGTTCTTTCATTATCACGTTAGTCAAAATTCCACGGATGATCCTTATGTACATTCACAGTCAGCTCAAAGGAAAGGAAAATGCTTGTGCTCGATGTGTGCTGAAATCTTGCATTTGTTGCCTTTGGTGTCTTGAAAAGTGCCTAAATTATTTAAATCAGAATGCATACACAGCCACAGCTATCAACAGCACCAATTTCTGCACCTCAGCGAAGGATGCCTTTGTCATTCTCGTGGAGAATGCTTTGCGAGTAGCTGCCATCAACACAGTGGGGGATTTCATGTTATTCCTAGGCAAGGTGCTGATAGTCTGCAGCACGGGTCTGGCGGGGGTTATGCTGCTCAACTACCAACAGGATTACACAGTATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTGCTTTCCTAGTCGCCCATTGCTTCCTGTCCATTTATGAAATGGTAGTGGATGTTTTATTCTTGTGTTTTGCCGTTGATACAAAATACAATGATGGGAGCCCAGGCAGAGAATTTTATATGGATAAAGTACTGATGGAGTTTGTGGAAAACAGTAGGAAAGCAATGAAGGAAGCTGGTAAGGGAGGCGTTGCTGATGCCAGAGAGCTAAAACCGATGGCTTCGGGAGCAAGTTCTGCTTGAACCTAGCTGATCGTTATGGAACCCATTGACATTCCAAAACAATATATACACATAACTATGTATTTGTGTGTGTGGGTGTGTGTATATATGTATATGTATGTGTGTATATATATGTATACGTATATACACACACACACATAATCAGCCAAAATCAGAGAAAAGGAACAGGGATTTAATACCTTTTTTATGCTTATTTTTGTCAAACATGTACTCCTTTCATACGGGTGGCTTTTACAAGGCAACTGCCATCATTTAATGTTTTCAATTGTAATTGTCTTAATGGAAATGTTAAGATTCATATCTGATTAACATTTTTAATAACTTAGAGGAGATTTTAACTTTAATTATTTAAATTAGGAAAAATTATTGTACTGAATCCTCTGTCTAAAGTTTATTCAGGGGTGATTTCCCTGTTGTGTGCATAAAATCAAGACCTTATTTTACTGATGCATAAGTCCTAGTGGGACGAGACTAGGCATATGCTTTCAGGTTAATAAGGACTTCCTCCAATCAGTTTTCCCCAATCAAAGAAGCCATGTCATTTTCCTTTTAGAAACATACAAGTGGACCCAATTTGGGAATTTTCATAATAGCTCATGCATTTGTCAGCCAACATTAAAAAGTAACCAACTCCTCAGGTATTTGTAGTTTACCCTAATGCTTCTATAAAGAGAGTAGGTAAAAAAGAAAAGGGTAGATAATCTTTCTTATGCAAACTTTTTTCTTACATTTTGTCTTTCTTTCTTTTGATGTTAGTAGCATCCTCCACACATTCGTGTGCCTGATTTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTAAGTTTCTGTGTATCGGTTTGCAGAGTAAATAATGCTGGGAGGAATAAAAAAGGGAGAGACACATGGAACACAACGCATTGAAAATTCCGGTGCTTGGGCTTCTGCTTCAGAGGAACCCTAGTGGCTTAGAGCTAAACGGCCATTTTATTCAAATGCTTGCTGTAAAATCTTAAAAACATACTGGCAGGTGCTCCTCTTCTTGGCAATTCATTAAGTATCCAGAATTCTACAATGTTTAACTGAAGAATTGGTTAACGTTTTGATCCTCAAGTGTTGAACGTTCTTTGTGTTTGGGGATGGGTTTTGGGTTTTGGGGGGTTTTTTAATTCCTGAAGCTTACCAGATATGAATGGCTAATATTCCATTGTTCTGCTTATTGTAATGGTGAATGCTTTAAGAAAAAAAAGTGTAATTTGCTAAGAATAATTCATGATCTGTTTATGCGATAACTCCTTTTTGTTACAATTTTTTTAAAAAAAGCTATTTTTGTTAATGTAAAGTAAATATTTCAGAGCAGATTTTTTAAACTTATTGCACTAAATACAGGCTCTGTACAAAATAAAAAAAGAAAAGCCTCAGCATTTTATCATTCCATGGAAGGAGAATCTTTTGAAAGAAAGCATTGCCTCCTACCAGAATTAGAAAATGAATTAGACCGGTATTATGGAAATACATACAATTAATGTCACTAGGGCTTAATAAGCAGCTGTTTGCTAATGTGCTTCCTTTCAAAGGGTTGGACCTTTAAATTGCTGCAAAAGGTAAATTGTACTTTTTTTTTAAGTATCCGTGTTCTTTAGCTAGGCTAAAATTTGCTAAATGCCTTGGTTTCTTTTCAAAGCTCATGTAATATTTCTGATTTTTCAGAATATTTGCAATAAGAGTCTGGAATTAAAAAAAAAAAAAAAGGAAACAAGAGCTCATGTCTTGGCAAGATCACGGAAAAGAAAATTATGAGAGTAGCTAATTTGAAACAATAATTCTCCAGAATTTAACATCTAACATCTGATGTCACTAAATGGTATCATTGTGCTCTTTTATATCATTTGAAATGGAATAAATATAATCATGTAACTAATCATCCAAATAGGTGAGAGAGCAAATCATGTAAGAAAATTTAGCATACCTTCTGTTTCATAGCCACACAGATTATGGACATTAAGAAACATTGGGAACTAAATTTAGGATTGGCAAAAGTCTAGAAGATGGGTATCAAAACAGAAGACATTCCAGACGCTAGTTATTTTAGGAGGTGTCCCTCCAAAGTGACCTGCTGGAAGTCTTGCATTTGGAAATTAGGTTCTGCTCACTTGGACATCCCAGCACCATGGACTCTTGCTGCTCCCTGTTCCGTATGCTCGCAATCTCAGCTATTTGGAAGCCACCAGGAATGCTTTCTAATTATCATTTGCAACTAGAACTGTAATCAGAAAGAAATTTTGTATTTTTGTATAACTGGATTGTGTGCCATTTTATATAACAGGTCCTGTTTTACAAATAAATTTTGTTCTACTAACATTGTGTTTAGAAATT EMBV3_24385 CCGAGTGCTTGTGGATGGGGACAAAGCTCCCTTCATCAGCGACTTTACTGACCTTCAGAA Gene GeneID:531898|LOC531898:XM_002690057:42_cdna Constitutive 0 NULL GeneID:531898 9 GENE LOC531898 NULL similar to chromosome 6 open reading frame 58 EMBV3_31930 TTTTCCCTTCTGCTTGCCACCTTGGGTGCTTGGGCAACTGCACTTAGAAACTGGATTGGG Gene BVT0102_191077 + 0 NULL GK000010.2:42958223-43058687 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020814 1 XLOC_011489 NonCoding TCONS_00020814 XLOC_011489 NonCoding NonCoding - 10:43002722-43003204 - TSS14704 482 1 0 0 0 5.75975076226182e-05 0 0 6.67915294848327e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000121559183338586 0 0 0 NM_001012706.1 C14orf182 Homo sapiens chromosome 14 open reading frame 182 (C14orf182), 8e-11 71.6 72.05 0.323651452282158 0 noncoding 0 0 0 0 0.0336922608780134 0.801677055024319 0.0231718006640502 0.727746436286295 CCTGTCCTCGATTCTTAGCCCCAAACTGCAGAAAAACCTAAATTCCCAATCCAGTTTCTAAGTGCAGTTGCCCAAGCACCCAAGGTGGCAAGCAGAAGGGAAAAAGTGCCTTTTCCTAGGCGAGGCCCTCTCAGGTTTGGCTCAGCCCCTACTCTCCCAGGGCCCACCTGGGCAGGTGAGAGGGGGAGACCTGGCCAGGTGTATAAGTGAACCTGCCTGTGTTCTCTAGCCCACAGAGGTTTGCAGAGGCAGCAGAGCTGCCATCTTGGCCATTTCCCACTCACGCAGCTCCTGTGCTCTTGACCCAAGGGCAGATTTGGTCATTTTATCTGGGGGTGGCGGGGTGGGGTTGATACAGTGACAGAGAGTCCTGCCAACCTTGTGCAAGTCCCCTAAAGGGCAGGCCTAAGTGTCAGCTGGCTCCTTGGCAGTGCCAGCCGAGAGAATGCCTGTTTCAGAAGGTGACAGTGACATAGGATGAC TCONS_00017000 TCONS_00017001 TCONS_00017002 TCONS_00017003 . 3' 85361 TCONS_00017000 TCONS_00017001 TCONS_00017002 TCONS_00017003 . 3' 85842 EMBV3_38520 TTAGAACCACTGAAACAAGAATTTTATCAGGGACTAGCACTGGAGTTGGAAGGCAAACAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_16670 TGATGGGTTCCGTAGGATCTTGGTGGGGGCAGAGGAATGGGCTTCAGCTCTTGAAAGATT Gene GeneID:535393|RAB3GAP1:NM_001083483:8_cdna Constitutive 0 NULL GeneID:535393 2 GENE RAB3GAP1 MGC137922 RAB3 GTPase activating protein subunit 1 (catalytic) EMBV3_02537 AACCATGCTCAGACACTAGCCAGGTTGAAGGGTTTCCATCTGAATTCCTTGAAGAGAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29868 GTCACGCCTGTCCAGCAACCTGGGACAAACAAAATAGACATCGGTTCCTATGAGTCTGAG Gene GeneID:511947|EOMES:XM_002696920:446_cdna Constitutive 0 NULL GeneID:511947 22 GENE EOMES NULL eomesodermin homolog (Xenopus laevis) EMBV3_38400 GCATAAGACACACCTTTGAACTTTGTAACTGGTTTGTGCAGAAAAAAATGTGCTTCTGGG Gene BVT0102_032640 - 0 NULL GK000021.2:31711238-31714323 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119156 TCONS_00119154 TCONS_00119155 TCONS_00119153 TCONS_00119152 TCONS_00119158 TCONS_00119148 TCONS_00119150 TCONS_00119149 TCONS_00119157 1 XLOC_072824 Coding TCONS_00119149 XLOC_072824 Coding Coding UBE2Q2 21:31649514-31713335 j TSS89295 3809 1 TCONS_00119149_1 377 0.0677343134681019 13 0.940520213099342 0.00495717882724263 0.00793635891088079 0.00410627197188317 0.00481224269328713 0.00651396071654695 0.00285851551586177 0.00761350144548738 0.00509591942215093 0.00970078938211587 5.15287953222455e-09 6.62376302321155e-10 0.000286604113024072 0.0011046183237167 0.00250802180209735 0.00261542882162888 3.45957955581271e-08 4.90066387164508e-09 0.00425563163088094 0.00214833854864184 0.00208125930486903 0.00213087925581201 0.00161561721592146 2.6893537416892e-05 0.00146133753287023 0.00432403984849008 0.000185092638377596 0.00112031533652551 3.9634852993619e-08 0.000151465106455128 0.000103129050665384 XM_005221922.1 UBE2Q2 PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2Q family member 2 (UBE2Q2), transcript variant X1, mRNA. 0.0 5256 100.00 0.764767655552638 NM_173469.3 UBE2Q2 Homo sapiens ubiquitin-conjugating enzyme E2Q family member 2 (UBE2Q2), transcript variant 1, mRNA. 0.0 3689 88.32 0.751115778419533 TCONS_00119149_1 sp|Q8WVN8|UB2Q2_HUMAN UB2Q2_HUMAN Ubiquitin-conjugating enzyme E2 Q2; 0.0 707 95.77 0.997347480106101 2 coding 0 1 1 1 0.0882286511354894 0.554154622787708 0.027413590016941 0.66725754779003 NTCTCGCCATTTTCCAGCCCCGATCCGACGCGGGCCGCGGCGGCGAGGAGAGGCGGAGCCGCGAGAGCGCGGCCCGGGCCGGCCCCGCGGGGCGGTCGCGGCCGTGACGGCGGCTCCGGGCCCGGCTCCCCTTCCGCACCCCTCCCGCCGGAGATGAGGGGAAGATGTCCGTATCAGGGCTCAAGGCCGAGCTGAAGTTCCTGGCGTCCATCTTCGACAAGAACCACGAGCGATTCCGCATCGTCAGCTGGAAGCTGGACGAACTGCATTGCCAGTTCCTGGTGCCGCCACCGGCGCCGCCGGGCAGCCCGCACTCCCCGCCGCCGCCGCTCACACTCCACTGCAACATCACGGAATCTTATCCATCTTCTTCACCAATATGGTTTGTGGACTCTGATGATCCAAACCTGACTTCAGTTCTGGAACGTCTCGAAGACACTAAGAACAACAATTCGCTTCGTCAGCAATTGAAGTGGTTGATATGTGAACTCTGCAGATTATATAACCTTCCTAAGCACCTGGATGTTGAGATGCTAGATCAACCACTACCCACGGGTCAGAATGGGACAACAGAAGAGGTGACTTCAGAAGAGGAGGAAGAGGAAGAGATGGCTGAAGATATAGAAGACTTGGATCATTATGAGATGAAGGAAGAAGAGCCCATTAGTGGGAAAAAGTCAGAGGATGAAGGAATTGAAAAAGAAAATTTGGCAATATTAGAGAAAATTAGGAAGACTCAAAGGCAAGACCATCTAAATGGTGCAGTGTCTGGGTCTGTACAAGCTTCAGATAGACTTATGAAAGAGCTCAGGGACATATACAGATCACAGAGTTATAAAACAGGGATTTATTCAGTGGAACTCATAAATGACAGTTTATATGACTGGCATGTTAAACTGCAGAAGGTGGATCCTGATAGTCCTTTGCACAGTGATCTTCAGATTTTAAAAGAAAAAGAAGGCATAGAATATATTTTGCTTAACTTCTCTTTTAAGGATAACTTTCCATTTGATCCTCCATTTGTTCGAGTGGTATTACCTGTTCTCTCAGGAGGGTACGTGTTGGGTGGTGGAGCACTGTGCATGGAACTACTCACAAAACAGGGCTGGAGCAGTGCCTATTCAATAGAATCGGTCATCATGCAGATCAATGCCACCTTAGTTAAAGGCAAAGCCAGAGTGCAGTTTGGAGCAAATAAGAATCAATATAATCTAGCAAGAGCCCAGCAATCTTATAATTCCATTGTACAGATACATGAGAAAAATGGCTGGTACACCCCTCCAAAGGAAGATGGCTAAATGTGTTGACTTTTGTATGCTTGGACCAGTGTTGCTTTAAAGAAAATCTTTCCAACATGCAGACACAAGCTTTGAGTGCCCCTATAACAGCAGTACCGAAGATGTTAGCTAATAGATATTTTAGTGGATAATCTGTCAACTGATCCAGTATAAGTTACAGCCTTTCCATTTTTCTCATTTTAGGTATCTTGGACTGAGCAGTGGGGCCTTTACTGTATTTTTTCTGATAAATACACATACTGGCCACTCCTAATCATCTCTTTCTTAAAGGTGAAACGTCTTAAGCAGACAAGTCAGCATCGGGTTACTGAAGTTATGACTTGAGGGCAAATTTCCCATTTTTGAGCTCGTGTGTTATGAGGATTTACAATATATTGTTCCATTAAAGCCAATAAAGTTTAATCAATGTTTAATATTGGTTTAGAAAATTTAAGGTGTTCTGAATCACAGTAGCTTTTTCAGGTTAAAACTATTTTATGATATTGCCAAAATAATGACAGGAAATGTACTTGATAAACTGTTAAACTTTTTTTTTTTTTTTTAACGGCTATGAAGATATGAACTATCTCCCGAAGATTTGCTCTTAATTGAGTTGAACTTTTTAGGCAGAGCAAAGCAAGGCTGTCAATTCAGCTTGTACGCAGTAATTTCCACTGGGGCATCAGAGTCTTGCTGAGCTGAATCTGCTTCTTGTTGGTTCAATATTTCTTATGAAGAAGAGCTTGAAGTATAGAGCTTGAATTATTTAAAATACTAAGTCATTCTACGTTTCCATTTTATTAACGGGATGTTGCAATCAGTTGTAAACTAATAATCTTATAAAGTGATTGGCACAAAGACTTCTTGAACAAAACTGCAGTTAAGTACAAAAAGTATCTAATTTGGAGACTTAAATTTTTTCTATAGTCATAATAATGGCTTTTACATTGAAAGACTAATAGGAATTCTACATATATTAATTCTTTTATAAAATCTAGACTCAAATCAGTGTACTCTCCATTTTATTGCCTTACCTGAATTAGTCCTGTTGGGTTGGTAATAGATTTTTTTTTTAATATACCCAAATTTGATTTAAAAGTAAACTCTAGTTATTAAGCACTTTTAAAAAGAAACCCAGAAGCACATTTTTTTCTGCACAAACCAGTTACAAAGTTCAAAGGTGTGTCTTATGCTTTAAGACTCAGTTTTTAACTTTGTAAACCACATCTGAAAGACTTGGCACTTCTGCATTATTGTGTTTAATTTCTTTTCCTTTTTTTCTTCTTTTTTTTTTCCTATTTTGGTTAAGAGGATAGTAGAAAAAGATTTTCTGGCATTCTTGTTCACTTGGTTAATTTGTATACAATTTGGATTGCCAGTTGCTCAGATAACAAGTGACAAGGCAGAATTCTTTAAAGCATTAAAGTTCCTTAAACCTAAGGCTAAGTCTTGAATACATTATTGAATTCTTTAATATCCTGATGGCTAGCAGATTGACAGCTGCACATTTGGCATGCTTTGGTTTTTGGTTTGGGGGGGGGTTGGACTTTATTTTTCATTGCAGATTTATTTGGCAATGTACAGTAAATTTTGTAAACTTGCATCAAGTTTATGAATAAAGAACCATTTAAAAAATAACCTCTTTCACTTTCCTTTTGTAACAGATACTCTTTGAGTTTCTATAGGCTCTGTTGGGTTTCTGGAATAGGATCATATATGGTGGGATGGGGTGAGGAGAGGCTTAAGGTAGATTGATTTCACAAGAGAAAGCTGGAAAACCCAGAATTGGTGTGTATAGACTTGGCATACTCAGGGTTTCCTCAACCTCTTCCCTTGCCCACACTGATTGTTTAATATAAATTCAGGTGCTACTTTCTGCATCGCTTTCCTAATTCCCCAAGGTACAGTAATCTGTTCCCTGTTCAGTGTACCCATAGCCTCTTCACACAATTGTCAATTTCTCACATACAAGAAGTACAGAGGTAGGAAAACTCCAGGCGTAGTACCTCTGCTGCTTTGAGATCGTTCTGTGTTGGTTTTATCTTTGGATAGACTTGAATGTGCAGCCACCTTAAAAATCCATCCAGAGGTAGATAACGGCCCTAGTGTCTCCTTAGGAAGTGAGAAAGTCTTTAGAGGTCCCCCTACCCCGCTCCCAAAAAAACACAACTTTTTCTGGGCCTAGAACTAGAGCATTTGTCTACCCCTAAATTAATGGCTGGTCAAAAGAATGAAACTATCATGATTAGTTTGGATCAGTGGTTTTCAAGGTATAATTTGTTGGAGAACTCTGGAGACTCCTGAGACCCTTTTAGGAGGTGTTCAAGGTCAAAGCAACACTAAACCATTATTTGATATTTTCACTCTCATTCTCTCCCAAGTGTACAGTGGAGTTTTCCAGAGGCTACATGATGTGATAGACATGATATTGAACAGACTGAATTCAGAAGCAGATCCAGCTGTCTAATACTAATGTCAATAGTTACAGGTTTATAAGATGTAAAGATGCTACTCTATGCAATACTGGGGAAT EMBV3_12369 TCCACATTGGTTACCCTTGGAATTTGCCCACCCTGTTGTGAGGAAGCCTGAGTAGAAGCC Gene GeneID:510988|GIMAP7:NM_001080257:625_cdna Constitutive 0 NULL GeneID:510988 4 GENE GIMAP7 MGC127192 GTPase, IMAP family member 7 EMBV3_40174 ACGGCTTAACCTCCATGAAGAAGAGGGGTCCAATGGGTCTGAGCAGAAGGGAGAAGCTTA Gene GeneID:511203|ANK3:NM_001105620:10_cdna UTR3_Alt 2 NULL GeneID:511203 28 GENE ANK3 MGC151492 ankyrin 3, node of Ranvier (ankyrin G) EMBV3_10625 GTTCTAATATTAGAGAGTGGCGACAGTTGAACAACTCTGTGGATTTACTAAAAACCAGTG Gene BVV0102_390808 + 0 NULL GK000002.2:39143869-39287888 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35775 CCACCTGCCCCATCCCCTGGACTCCCACAGCACTTCTACCCTAGCCGGGCCCAGCCCCCG Variant GeneID:444858|EIF4GI:XM_002684874:75_cdna 61^147 1 EMBV3_21149 GeneID:444858 1 GENE EIF4GI NULL eIF4GI protein EMBV3_32857 GAGATCGCCCTGTCCTCCAAGATCCCCGTCACTCGAGTCCTTAAACGTCTCCGTGGCCGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10094 GGGTGGCAAAATATGCCTGACTGATCACTTTAAGCCTTTGTGGGCCAGGAATGTGCCTAA Gene GeneID:537221|UFC1:NM_001015663:320_cdna Constitutive 0 NULL GeneID:537221 3 GENE UFC1 NULL ubiquitin-fold modifier conjugating enzyme 1 EMBV3_08476 TAACTCTGTGATTTTACATTCTATTGTAATTCACAAGCATTTAGATCTTTAGTATAATTA Gene GeneID:509241|DPYS:XM_002692756:95_cdna Constitutive 0 NULL GeneID:509241 14 GENE DPYS NULL dihydropyrimidinase EMBV3_01437 GGAGACTGAAAGTTCCTCCTAACTCATAAACTTTGTAAAGACCGGTGCTGTTCATTCGTG Gene GeneID:782847|ZHX1:NM_001110095:62_cdna UTR3_Alt 2 NULL GeneID:782847 14 GENE ZHX1 MGC159821 zinc fingers and homeoboxes 1 EMBV3_43749 AGATGGGAAAAGACTCTCCGATTACAGCATCGGGCCGAATTCCAAGCTCAACCTAGTGGT Gene GeneID:785214|UBL4A:XM_002685556:4_cdna Constitutive 0 NULL GeneID:785214 2 GENE UBL4A NULL ubiquitin-like 4A EMBV3_07217 GATGGTAGGATCTGAGCTTAGTAGAAACATTAGATTAATCCCAGAGCACAGGAAATTGAA Gene BVV0102_290638 + 0 NULL GK000010.2:87280877-87297569 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015266 TCONS_00015263 1 XLOC_008450 Coding TCONS_00015263 XLOC_008450 Coding Coding LOC100847750 10:87263694-87284190 = TSS10811 5141 1 TCONS_00015263_1 208 0.10387084224859 7 0.749499878019029 8.9149832747725e-05 5.94136565153403e-06 1.69042406016186e-08 1.95924658272559e-05 2.98305634005322e-05 1.28602849522448e-22 1.37302770564809e-05 6.27800985429166e-05 4.34701397255324e-05 0.000168641102485659 9.64613379211131e-05 0.000100778973182952 1.65231394281724e-05 0.000143673758567678 7.64499617887827e-08 0.00682529576598086 0.00617610086600002 0.00648581474773854 3.2707674047772e-05 2.32251746143406e-05 3.46936867470115e-23 0.00213952015026144 0.00179941472648586 0.00329271880959681 2.70443659402235e-05 2.30362721055987e-05 1.91536155671546e-05 0.000127770880388136 0.000200556267384256 6.72870492260789e-05 XM_003586584.2 STARD4 PREDICTED: Bos taurus StAR-related lipid transfer (START) domain containing 4 (STARD4), transcript variant X1, mRNA. 0.0 3301 100.00 0.355767360435713 NM_139164.1 STARD4 Homo sapiens StAR-related lipid transfer (START) domain containing 4 (STARD4), mRNA. 0.0 899 84.48 0.154444660571873 TCONS_00015263_1 sp|Q96DR4|STAR4_HUMAN STAR4_HUMAN StAR-related lipid transfer protein 4; 3e-139 392 88.78 0.980769230769231 1 coding 0 0 0 0 0.119937495062861 0.380889832540393 0.0618271984584767 0.513026785945681 CGGGCGCCTGGTCGCGTCTTGGTCCGAGGAGCGCCCTAAGGTGGATTCTTTACCACTAAGCCACCAGCTTCCCAAGGGCTAGGCCTCATCGCGAAGAGATCTCAGAGGAGCCTGACCAAGGAGAGAGTCTTTGTCAGCATCAACAACTACTGCAAATTATAGCAAGGAAAAACAAATGGAAGCCCTGCCTGATGCAGCTGTTTTGGCGACTAGACTTAAAAACACTCTTATCCAGTACCACAACCTTGAAGATGAAAAGTGGCGAGTTGCTAAGAAGACGAAAGATGTAACAATTTGGAGGAAACCTTCAGAAGAATTTAATGGATATCTCTTCAAAGCCCAAGGTGTGATAGACGACCTTGTCAATAGTGTAATAGACCATATACGCCCAGGTCCCTGTCGCTTGGATTGGGACAGCTTAATGACCTCTTTGGATATTTTGGAGCACTTTGAAGAGAACTGCTGTGTGATGCGTTATACAACTGCGGGTCAGCTTTGGAATATAATCTCCCCAAGAGAGTTTGTTGACTTCTCCTATACTGTGGGCTATAAAGAAGGGCTTTTATCCTGTGGGATAAGTCTTGACTGGAGTGAAAAGAGATCAGAATTTGTTCGTGGATATAACCATCCCTGTGGTTGGTTTTGTGTTCCTCTTAAAGAGAGTCCAAGCCGGAGTCTTTTGACAGGCTATATTCAGACGGATCTGCGTGGAATGATTCCCCAGTCTGCAGTAGATACAGCTATGGCAAGCACTTTAATCAACTTCTATGGTGATTTACAAAAAGCCTTACAAAAAGCATAATTTGCTTAAACTTACAGTAGTAGTATATTCTCCAAATCAACTCCATCTCTTAGCTGCATGGCTCATAAAAAATCATCCTTCCCTCTCTTCTGTATAGCCCGTAGAAAATTTTGAGATGGTTTTGGTTTATTTTATTCAGAAAGTAAATAGCTAGCTAGAGTGAGCATCTCAGTTTCCCTAAACAGTTGTTTGCACATTGTTTGGAATGGTAGTGTGTCTAGGAATGGAGAGGATGACAGAAATTCACCAAGAAATAGATATAGGTCTTTGACATAAACTCTCAAGAAATTGAATCGTGCCTCAGTAGGAATATTTTGGCTGCTTAGAAATTAAGAGAAAGCAAAGCTTCTTGCTGGTAGGTTAAAATCACCTGTTTTAGAGCTTTATAAACATTCTGTAAAAGTTTTAACTTTGGAGGAAGTTGTATATTAATGTTTTACTATATGTATGCTCTATGAGTTTAACAATATCTTGGACTAAAGAAAAACTACTTTTCTCTATTCCTAAAGATGAACTTCACTGTTGACTTGAACGACTTTAAATATTGAAAATATCAGAAAGAAGAATAGGTCTCCTAATGCAATCAGTTTTGATACCTAGATAACTATTTTGTAGATATCTTTAAAAATATATTTGTATCTTTATGTGCTCTTATTTTGGGAGTCTTAAAAGCCTTTATGCATGAATAAGACAGTGCAAAAAAACTGCCAGATATGTGCTGGGATACCACGTTGATTGAGCAATATTCTGGGGTGTGTGAAATGGGTGGTGGTATCCAGTACTAACCAATAGAGAATCATCTTTTTAGAAAGTTAGATTCAATGAATGTTTTGTACCTGTTTGAGTTTTAAATGTGTCATTCAAATCATAAATTACTCACTGTATCATACACATTCACAATTGTGATGTAGTATAACAAATGCATTCATAGATTTATACAAATGCCTGGATGAGTCATTTTATAGCTAGAATGGACTGTAATGTGCCCTTTGGTTCTGTGGCTACATTAAATGAACATTCCTGAATGATTTTAATATTCCAAGTGCTTTTTGGCATTTGCACTGTCTGCCTAGTTTACATGTAAGTTGAGAACTTGAGGGAACTCAGTGTGTCTGTGCAAATTTTTATATTTGTGTATATGCACACATCTTGAAATCCATTTCAGTATTCAGTGTGAGTTATTTATGTGTTATTATTACTGTTCCCACTGTTTCATTTTCTCTTCTTTCTCTTGGGTTAATGTGGGATAAAGTGAGCTCTGGAAATAATATTAATATTTACTAGATAGACCTCAAAGTGGGCTTCCCTGATGGCTCAGACAGTAAAGAATCTGCCTGAAATGCAGGAAACCTGGGTTCAATCCCTGGGTCAGGAAGATCCCCTGGAGAAGGGAATGGCAACCCACTCTAGTACTCTTGCCTGGAGAATCCCATGGACAGAGGAGTCTGGTGGGCTACAGTCCATAGGGTCGCAAAGAGTTGGATACGACTGAACAGCACTTTCACTTTAGACCAGGAAAAGCACAAAAACATTATGGTTCAATTGCATGAAGGTGTGATCTGTATGTTACTTTCCTGTGTTTTCCTGAGTGTTAAATAAAGCATAACTCATAGTTCTTCAGATCCATTTGAAAACAGAAAAAGTAGAGCTGATTTATTTTTATTTTTTTGCTATTGGAGATAATGTTCAAAACAAAAGGTGGCAGTACCATTATATCCATAGTGAATAATCTCACAAATTTTAGATTAAAAATAATTCATTTCAAGGTCTGATAGAAGCAATGCAAAAAATGATCTTATATTCTTAACTTGAAATTTATTAATCACCAATGTTTTTTCCAGATTGACTACCCAAATTTTTGAGTTGTTGAATTCCTCTGCTACTTCTTTTTCTTGCAATAAGGAAAGAGAACTGAGGAGTTTAACTTTCAGCTTCCCTTAGAAATTGTTAAATGTTAATTTTGACTTAATCTATTGTCTTTTATTTGGTTTTAGTAGTGTAGAGTAGGAGGTTCCTTATACTCCAGTGTTCTGTCTAGCATTGCAGAATACCAGCAGGTGTCCAATTATAGGGTGCCCAGATTGGGTAAGGTTGCAACAAGATGTATATTACTATAAGGGCTATTATTGCCTAAGCTGGGTACTGCTAAAGGCAAATAAACTGTCCACTCTAAGCTACTCCGTGTTCTCTTGGTTTTTATAACTTAAACCTTCAACTAGTGATTCCATAATCCACTCTTGAATGAGGATCCTTGCAGGTAACAGGACCCTCATGGAAAAATTCATTCACAGTGTTGAGCCATCTGATGGATTGAAGGATCATATTTGAATTACCTGCAGTTTACATACAGCTTCTGGATGGCACTTCTAGATGTGTAGCTATTACCACAGTCCAGTTTTAGAACATTTCTATCATTCAAATGATCTCTTTTACCTGTTGGTTGAATCATATATAAACAAAGTTTAGCACAGTTGTTTAGTATACAGATGATGATGAAAAAGAGCAGGTTTTGTTTGGTCTTGTACTCAAGAGTAGAAGTGTATTTGATTCTAAGCTCAAGAGCCTTGTGATAATAGGTTACATATGTTATGTCAAATACCACAGTGAGATGAAATTTAACAGTGTGGGTTGGGATTAATATTAACACATGTAATAGAATTTGATGTTTCTGTAGCCGTGCAGTAGAATAGAAAAATAATGTGAGCCATAATTGTAGATGTCATTTAAATTTTTCTAGCGGCCACATTAAAAAATTAAAAGAATCAGTGGAAGTTAATTTTAATAGTATAGTTCATTTCACTCAGCATATCCAAAATATTATCATTTCAACATGTAATTTATAAAAATCTTTTAAGATAGCTTGCATTCTTTTGTACTAATTTTTTTATTTCTGGTGTATATTTTACTAATTTGGGCTAGCCACATTTCAAGTTAATTTTAATAACTTAATAATACACAGTTCTGTATTAATCTACATATTAATTTGTTGTTCTATAAGATGTTGTAGGGAATTTCCTAGAATCACTCTCTTAAGTACAAAATCTTTTCTGGTCTCTGAAGCCTTCAGTGCTTGCTTTTAGTGTGCCCTAAGAAGTGTGAACTTCTTAACATTAGAAATAAATCAGTTAGAAATAAATATCAATTGTCAATAAAATAAAAATGATAGCCCAAAATATTTCCCTTTAAAGATAACAAACTTTTCATAGGACTGTTGATGGAATGAAAGAATATAATCTGCCTTGTGGCAATATGATTGATTATTTTCTCTGGCTTATAGCTAGTTTGTATTAGAAACACATGTATGTAGGAGATATTTGGCATAGTACTGTTTTCAGTACATACCTATTTTTTTTAGAAAGTTAGTTTCATACAAGAAGATAATTTATCATAAGTGATACTTTCACATGAATCTTTGATTATCTTTTGCATGTTAATCTTTGATTAATCCTTGAAGTTTAACAGAATACTCAGCAATAATAATTATGAGAATTTAGTGTTCTGCAGTTATGAGTAATATAAACTGCTAGCTGTTAAAGACAGATTGTTCATGTTAAAATTCTCTTCATTTTGTTGTTCACTGAGGTTGGATATATTTGACACTGTAGATTTCTATATGTAAAAATATCTCCCAGTAAAAAAATGCCTTTCTTTTCTCTCCTCCTTTCTTTTTCCTTCCTAACTGAAGAACATTTTATCATCACTCAGGTTGAATTAAATTAACATCTCAAGCTAAAAGCTCTGTAATTGAGGTTGCCTCTGGAGAAGATAGGAAACATTGCACAATGCAAACTCCTAATGTCTGTTGAGCTTTTACGTATGAGTAATTCCCTTTGATGTAGATAAAAGCTTTACCTGTTTACTTTTAAGGACACACTAGCATCATTTGAATCAGTTCTTAAAATCCAGTTTATACTATGGATATCACAACCCTATGCATAAATTAACAGAACCCAGGGAAGCAAGGAGACTTGACTTAGACCCGTGTTACTTGTCCAGTCTGTCTCCCATGTCTTTCTTCTTCAGCTTTCAGAAGGAGGGGATGGTAGGATCTGAGCTTAGAAGAAACATTAGATTAATCCCAGAGCACAGGAAATTGAAATAATATATTGTTGTTTCCAAAGATTTTACATGTATGGTTAAATAAAAATTCATTCCTTGGAATTAAATAAAAGCTGTATACCATATATAGATTTTATTTTTAAGAAGTTTGTATTTCTTTTATGAGCCAATATATAAAACTGGAACCTTTGTTAAACTAATAAGCATGTATTAATATAATAAAATGTAACTTATTAAATTTCTATGAAATATATCAATAAAATTTGTGCACACTCTTATA EMBV3_22518 GGGCAGACGTTCTGCAACCTCGATGGCCATGTCCGGGATACCCTGATGCTGGCGTACAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_04178 CTGTAAGTCCAACACGGTCCATCATTTCTTCTGTGATGTTCCAGCTGTCCTGGCTCTCTC Gene GeneID:528051|LOC528051:XM_002693789:90_cdna Constitutive 0 NULL GeneID:528051 15 GENE LOC528051 NULL similar to Olfactory receptor 5B2 (Olfactory receptor OR11-240) (OST073) EMBV3_41410 GCTTCCAAGCATTACTTTAACCTCCCTCAACAAGGTATACCTCAGTTCCACGGTTGCTAA Gene GeneID:281598|ACVR2A:NM_174227:49_cdna Constitutive 2 NULL GeneID:281598 2 GENE ACVR2A ACVR2 activin A receptor, type IIA EMBV3_08326 TTTCACCACCCCGGATAGAGACAATGATCGATACCCCTCTGGGAACTGTGGGCTCTACTA Gene GeneID:511711|FGL2:NM_001046097:123_cdna Constitutive 0 NULL GeneID:511711 4 GENE FGL2 MGC137839 fibrinogen-like 2 EMBV3_41327 GGGGCTCTGGAGAGTGCCTTTCAGGAGTGTGGCCATTCTGGTGCGGAGGGATGAGGTACG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06784 AAAACCAAAGAAAAGGAGAGGGAAGAACAGGCTGGGGGCTCCTCGGTGGCGTCGGCTCCA Variant GeneID:540667|MARCH8:NM_001076232:35_cdna 269^319 1 EMBV3_34728 GeneID:540667 28 GENE MARCH8 MGC138116 c-MIR membrane-associated ring finger (C3HC4) 8 EMBV3_32284 CCTTCAAAGGAAAAAGGCACATGGGCAAAATCCAGAGAAAACCAGCCTCCTTGGAGCTCG Gene GeneID:100140878|LOC100140878:XM_002700064:37_cdna Constitutive 0 NULL GeneID:100140878 X GENE LOC100140878 NULL similar to ribosomal protein P1 EMBV3_24489 CAGGATGAGACTTCAGCTTCTAGCCATAATGAAGTGACAGGGGCTAGGTTTACTCTCCTG Gene BVV0101_009079 - 1 EMBV3_01932 GK000023.2:15437408-15465649 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13589 TTCCTGGCTTTTCATCTGTCCGAGAGAAAGGTTTTTCGGCCTTCACCTGAAGATCATGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11950 TTCATGGGAAACAGATGGGGAAACAGTGGACACAGTGGCTGACTTTATTTTTTTGGCTCC Gene GeneID:508273|RANBP6:NM_001037817:46_cdna Constitutive 2 NULL GeneID:508273 12 GENE RANBP6 MGC128472 RAN binding protein 6 EMBV3_14567 GATCATTGAACTGAGACGCACCATGAATGCTCTGGAGATTGAACTGCACGCCCAGCACCG Gene GeneID:537917|KRT39:XM_002696012:430_cdna Constitutive 0 NULL GeneID:537917 19 GENE KRT39 NULL keratin 39 EMBV3_19387 TGCTCCCTAGATCATTCACTTTGCTGTTGTTTTAAAGATCCTGCCTAGGGACTTCCCTGG Gene BVV0102_373341 + 0 NULL GK000019.2:29648239-29653155 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40311 CGATGTTGTACCTAGAGGACTATCTGGAAAATGCAATGGATCAGCTAGAACAAAGAGTCA Variant GeneID:513000|ING3:XM_002686906:114_cdna 152^223 1 EMBV3_32747 GeneID:513000 4 GENE ING3 NULL inhibitor of growth family, member 3 EMBV3_39401 ACATGAAGGTGTTCGAGGTCCACTTCCCCTGGGAGGCCTACACTCTGGACGAGTCCTTCT Gene GeneID:516589|LOC516589:XM_002694146:535_cdna Constitutive 0 NULL GeneID:516589 16 GENE LOC516589 NULL similar to hCG1797874 EMBV3_13052 CCTGAACACATATATGTGTACGTGTATAACCCCACCAGCATGTTTATTGTCAGTGGATGG Spike ESK0302 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13145 CATGACAAAGTCTTGGCTTAGCTGAGGTGATTCTTGGGCTGTGTGGTAGGTACATTGGCC Gene GeneID:532120|BBS4:NM_001075956:191_cdna Constitutive 0 NULL GeneID:532120 10 GENE BBS4 MGC139427 Bardet-Biedl syndrome 4 EMBV3_08202 GGTTTCAGAGAAAGATAGAGCTCCTGGTGTCGGTTTAGGGGAAAAGACGGTGCTGTTTGG Gene GeneID:516579|LOC516579:XR_084578:212_cdna Constitutive 0 NULL GeneID:516579 13 PSEUDO LOC516579 NULL similar to ATPase, Class II, type 9A EMBV3_26011 AGAAAGCTCGACCAAGACTGAGACCGATAATGTCCCAGGCAGACAAAGGGGCGAAGGTTA Gene BVT0102_190385 + 1 EMBV3_24736 GK000018.2:10263074-10294994 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21213 GTCAGGTCATCTGAGTCCTACAAGGAGACGCTGCACAAGACAATGGTGACGCGCATCAAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06602 GGAGTTTTCAGATATTCCAAAATCACTATTTTGGGGGCACACAGTTAGAAAAGGCCTAGG Gene BVV0101_068464 + 0 NULL GK000019.2:44446882-44456885 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28155 GAGTGTGGGACCCGGGAGATGCGAAGCCAGATTGTAGATGCCTTTTTCATTGGCCGCTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_39889 ATCAACTTGCTTGCAGTAATAGCCCCAGATTGCTTGGATGATAAAGCTTATTTGCCCCTT Gene GeneID:520291|CARD6:XM_002696354:13_cdna UTR3_Alt 2 NULL GeneID:520291 20 GENE CARD6 NULL caspase recruitment domain family, member 6 EMBV3_07102 GGCACTATTCTAGATCGTACTAAGGATGCATCAGTGAGCAAAACGAATAGAGTCCCCAGG Gene BVT0102_137302 - 0 NULL GK000006.2:23302662-23358307 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00204714 TCONS_00204717 TCONS_00204712 TCONS_00204716 1 XLOC_124511 NonCoding TCONS_00204717 XLOC_124511 NonCoding NonCoding LOC100847459 6:23336872-23358350 j TSS153087 2539 1 TCONS_00204717_1 90 0.199684915320993 4 0.881966755133399 0.0257977276600629 0 0.0216466566889019 0.0159906281324207 0.0198407224818376 0.00865481315324748 0.0107971847272213 0.0121847367681008 0 0 0.00275099906039953 0.00233361266075621 0.00374815919648267 0.0106533033824228 0 3.32161424114838e-07 0.00154803371483086 0.000964253942091572 0 0.00959046249139351 0.00231563741683691 0 7.53730853140693e-05 1.11589521838118e-07 0.00422619796263414 0 0.00604615548329381 0.00114105417442716 0.000572569209029484 0.000701847533905013 NM_001075135.1 UBE2D3 Bos taurus ubiquitin-conjugating enzyme E2D 3 (UBE2D3), mRNA. 1e-73 282 100.00 0.0610476565576999 NM_181889.2 UBE2D3 Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBE2D3), 2e-72 279 89.62 0.0827097282394644 0 noncoding 1 1 1 1 -0.45477645989689 0.0104914024389331 -0.0986235161758045 0.106778264974627 GAACATTGTGCTGGAGGGTCACGGCTCCTGTTACCAGCCTCGAGGTTCTCGCGAGATCCGCCTCCTCAATACCAAGCGCCTGTGTCTGGCAGAGCCGGTGTGAGACGAAGAGACAATCCTTCCCAGCCGCCAGGATAATCAAGAGTTTTGGCCGGACCTTCGAGCACACACCGAGATAGTGAGGAGCCAGACGAAAAGCACAGACTATGGCGCTGAAACGGATTAATAAGGTGATACCCAGCTGCTGTGACACCACTTTAATCATTTAAAAGCTCTAGAGAGGCAATATAATGGTTAAGGGTGTGAACTTTGGAGCAATAAAATGCTCCAGTTAGAATTTTAAGACTGGGAAAGTTTGTATTTGTGTGCCTCTGTGTTATGTATGAGCTGTGAATAATTGAGTGTTGAGTATGTACCAGGCACTATTCTAGATCGTACTAAGGATGCATCAGTGAGCAAAACGAATAGAGTCCCCAGGATTTTTTTTTTTTTTGGAATTAAATCAGTTCATGTGTGGCTTTAAACAGACTCCCAGCACCTGGTACTCATACTATTACTGCAACTTTAATATTACTGTTTTTAATTTGCAAGAGCTTTTATTAAAGAACTTTTCTAGTCTAGTACTCTTCATCAATACCAGACTCTTCTTTTATAAATACTTAGAAGGTCTGTATAATACAGAAACTGGACGTACGTGGGACATTATTGATTCAGTCTGTAGAAAAGTTGTGTTGTTTTTGGTTTTTAGCTATTTAGTGTCAGAATCACATGGTCAAACTTAAAAAACCAAAAACTCAAAATTTTAGCAAATGGACAGCTCTGATGGGAGATACTCTTTATTTTAGGCACTTTTTTTATTTTTGAATTTTTTCTTTCCTGCAGCTGCCCAGATTCTAAATAGATAGATCTAAATGATAGATCTGTATCCTTTGTTGATATTTTATTGAAATGCTTATTTTGGGTATATTTTTAATCAATAGTTCATTTGATTAAGTTTTTGAATTTCTTTCCTGAAGCTTATGTTACAATTTTGTTTATTTCTTGGACCAAGCAACCTTATCAATCAACTCTGTTATTTTTCCTCTTGTCTTCTTTGTTTGGACACACTGTGATCTTACAAGGCTGTTAAACAAGAATCAAAAAATGGGAACTCCCACAATGGTTGGTGCTGTTTTGGGGGCCATAGGCAATTTTACTACTCTTATTAAACAAAATAACCACTGTCCATGTATTTTGAGGAAGTATAAAGAGAACTTTACATAAAATATAATATGAACCAAACCTGAAAAGCTCAGGCTTTGAGTGTTTGCAATGTGTCAGAACTGTTTGAAGCACTTGTATTAACTCATTTAATTTTAAGACAGTCCAAGGAAGTAGGTATAATTGTTACCTCCATTTTTGAGATTAGTAAACCTGAGGCACAGAGAGATTTTAAAAATCTACCTAGGGTCATAGCATGGGAAAGTTAAGATTAGAACCTAGGCTGTTGGACTCCAAAGTGTGTGCTCTTAACCACTACATTTTCATGTTATCTTTTTAGGGGGTTGGTATTCAAAAAGGTTTCTTTTGCATGTATCTTTCTGCTAATAGCTAGGTTTTAGCATCTACTGTGTATTGAACACTGTTTCTAAGCCCTTTATGAGTATCTACTCATTTTATCCTCACAACAACCATATGAGATGGATGCTCTTACCATTCCATTTTACACATCAGGAAATGGGCATGGAGTAAGTTACTTGTCTTATGCTCAGATGGCTAGGAAGGGACTGAGATTCAAACTAGTCTGCTGCAAGAATTCAGACTCCTAAACTCATTGTGAACTGCTACTTTGAACAATTTCAATTCCTAAATTAAATTTTGCTTCCTGAAATAACCTCTCCTCTTACTGAACATTTAGATAATTGGGATTTAACTTTATCCTTAGGTTATAGCTAATTCTTGAGTTTAGATCTGAACTAATACAAGTTTTGGAAGTAGAAGTGAATTTCTTTTTTGGTTAGTATCTTCAAGGACTAAGGGAACTACTGTGCTGATTTTGCTGACTAATCACTAGGGGGATCATAAACTGGTTTCCAGTGAATGTACAGGCTGTATACGCCATGTGTCAAGGCTTGTCTATAACCAGCTAAGTTTGCAGGGCATTCGTTGAGAAATGCTGATCATAAAATTACCTGTTTTTATTTTATTTATTTGAATAAGGTTAACTGATACTTGCTTTGGTTTCATCATGATCCTCTGCATTGTTAATTCTGATAGTTAAACAAAAGGGAAGTTGAATACTCTTGCTTTAACTCTGGGGAAAAGCATCACTGGCTTATCTCTTATCATATTGTATGTTAACTCGTGGGTTCAGGTGTCCTTTGATACCTCAATTTTTGAGGATTTTCCAAAGCATTTCACTATAATCTCTTTATTAAAGATGACAGACACCAAGTTCCTAGAACTGAGATTGTGTTAATTAAATCCTAAATTAGGTTTTGCATTCTATTACATACTATGTATGTGGATTTTGACAGGGGTTACATTTATGTATTAGANN EMBV3_38740 CAGCAGCAGATGAAGGCTTTAACTTTGCACACTTTGGGGGCCACAGTCGCCTCAATGTAT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21752 TCTTGGTGGCAACTGGAGATGCTGACATGAAGGGACGGCACGCAGGGGGCCTGGGCAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26907 GAGGGAGATGGATGCTGAGTTGTCACATCAAAGGAAGCAGCATTATTCTAGCAGCATCCA Gene GeneID:326583|UBE2D3P:NM_001075135:5_cdna Constitutive 0 NULL GeneID:326583 6 GENE UBE2D3P UBE2D3 similar to Putative ubiquitin-conjugating enzyme E2 D3-like protein EMBV3_28030 CGCTGCTGGTCCTGCGACTGCTTCTCGCTGGACTTAAGGATGCTGTGACCAGAAGATGGG Variant GeneID:539433|DCAF11:NM_001014954:228_cdna 314^368 2 EMBV3_28190 GeneID:539433 10 GENE DCAF11 MGC137750 WDR23 DDB1 and CUL4 associated factor 11 EMBV3_18885 TAAACAGAGTCTAATTTGGCTTAGATTTTAAGAACAGAGTGGCAGTGATTGATATCTGGG Gene BVV0102_352413 + 1 EMBV3_31416 GK000010.2:95431195-95708523 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_20603 ATAGATACACTACCAAACATATCACCTTAAAATTGTGTAAGGATGAACTTCATACAGATG Gene GeneID:508840|FNDC3A:XM_002691784:393_cdna Constitutive 0 NULL GeneID:508840 12 GENE FNDC3A NULL fibronectin type III domain containing 3A EMBV3_13226 TGCTGATGGAGACGCCGCGGCCCCCAGGGTGGAGCCCCATGCATCCGAGGAGGAGATGGA Gene GeneID:100337083|LOC100337083:XM_002691014:347_cdna Constitutive 0 NULL GeneID:100337083 10 GENE LOC100337083 NULL calcium/calmodulin-dependent protein kinase IV-like EMBV3_14070 AGACTGCATATGTGATGCTGCTCTTGAAACTCTTAGCTCCCCCAACGCTCTCCCCGACAC Gene GeneID:407217|EGFR:XM_002696890:346_cdna Constitutive 0 NULL GeneID:407217 22 GENE EGFR NULL epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) EMBV3_04002 GTTCCTTTGAAGAAAGAGAAACAAGCAGGGCAGCATTCCTGGGGATGGAGCTGAACTCTG Gene GeneID:100295485|LOC100295485:XM_002696093:144_cdna Constitutive 0 NULL GeneID:100295485 19 GENE LOC100295485 NULL similar to angiotensin I converting enzyme 1 EMBV3_13974 AGGACGCGTCACAACTCATCTTTCCCAAAGCTTGCTGCTCCAGAAGAAGCTTCATAAGTT Variant GeneID:617422|POLR2D:NM_001076458:51_cdna 97^277 1 EMBV3_09399 GeneID:617422 2 GENE POLR2D MGC140544 polymerase (RNA) II (DNA directed) polypeptide D EMBV3_39124 CTGACCCTGATTTGCCAGCACGAAGAAGCCCTGACATTAACGACACCCACCTCTCTTTCT Gene BVT0102_175519 + 0 NULL GK000027.2:376196-1019176 27 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00156626 1 XLOC_095086 NonCoding TCONS_00156626 XLOC_095086 NonCoding NonCoding - 27:704456-705034 - TSS116951 578 2 TCONS_00156626_2 61 0.996539792387543 1 0 0.00367605160011759 0.00305103206992721 0.00485381579390926 0.0029524258709854 0.00150336303057663 0.00050953472700114 0.000633954326422391 0.000913302269950425 0.000828145605038786 0.000199317926883471 1.18816018039559e-05 9.48568060566782e-05 3.47490816360754e-05 0 0.00132416163107 9.13893939609011e-05 0 0 0.00107419259751793 0.00169832355644545 0.00128327061492239 0 2.2674322435495e-06 0 0.00253325901428186 0.00189341835055 0.00145971874379986 0 0 0 XR_229376.1 LOC101906268 PREDICTED: Bos taurus uncharacterized LOC101906268 (LOC101906268), 1e-143 513 86.03 0.77681660899654 0 noncoding 0 0 0 0 -3.06296071009034 0.000835387161796062 NA NA TCCAGGGATTCCTCCAAGACCGAATCCAAGCCATCTCCCAAGACCAAGTCAAGACTGTTCTTTTGCTTGAGACCCTGATGGCTAGAATAGAAAATTAACACTACGGGCCTTAGATTTCCTTCCTCCCAGACCGCAAACCCCTGACCCTGATTTGCCAGCACGAAGAAGCCCTGACATTAACGACACCCACCTCTCTTTCTCTTTTTATATGTATTTCTTAGGGTTTGGAATGAAGCAAAGTTACATGGCTCAAAATAGTCTGGAATTAAAACTCCCCTTCAGATTCTCCGCATCATTCTATGCAAAACAAAGAACTCTCTCACCTGAAGGGAAAAAATGGACATTAAGGTTGATTATGCCCAGCTCCCAGCCAGTCCCAGCCTCTGGCTGATCTCCAGAATTCCTTGCCCCAGCTGTTTAAGAGATAACTACTCCGAACAACCTTGGAGAAGAACAGGCCCCCTTAAGACAATAGCTTTCCACATATATGCCTACATATACTTAACTCTTTTCTTGGGTTAGTGCAGCAGCTCACTAATCTGACTGTTGCCCCTTCTCACCTCATTAAAGGTGATCTG TCONS_00155755 . 3' 313106 TCONS_00155755 . 3' 313683 EMBV3_24502 TCTTGGACTTCGTGGAGCAGAAATGTGAAGGTTGAAAAGCTGTTAGAAACTTACCTTAAA Variant GeneID:513777|CCDC104:NM_001034453:101_cdna 227^291 3 EMBV3_35314 GeneID:513777 11 GENE CCDC104 MGC128282 coiled-coil domain containing 104 EMBV3_41536 CCTCCTGAGATTCCCATCCTCATTGTGTTCATTCAGGTGACCATCAGTCTTGTGATGAGC Gene BVV0101_016501 - 1 EMBV3_28459 GK000021.2:29365804-29500831 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_35487 CCGACGCGGAGGTTTCCGCGGCTTCTGCGGCAGGCGGGGACTGGCCGCTACCAGGTGCTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_25534 ATCTGGGTTATCGCCTTCTGATCTTCTGGAAGCAACTGAGAGAGCCCGAACAGCCACTGT Gene BVT0102_040917 - 0 NULL GK000015.2:27934086-27941814 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00060816 1 XLOC_036847 Coding TCONS_00060816 XLOC_036847 Coding Coding SIK3 15:27939979-27945127 j TSS45413 2784 2 TCONS_00060816_3 106 5 0.460073829415193 0 9.44070333355564e-56 0 8.32594848656141e-134 5.28799413372416e-34 3.40281191472015e-39 5.03065868574171e-160 0 5.63149971261499e-249 3.44909904620565e-46 1.25480357227251e-115 1.02161110374809e-54 0 5.11308335327114e-90 7.56892932750879e-155 3.10837002133408e-05 2.71012155121633e-06 2.99080925858159e-20 1.12259406211419e-168 0 4.60548207638121e-27 0.000276733310124801 1.16009326406104e-08 1.89658919639028e-113 0 3.52313185141156e-184 3.5311262974915e-115 0 1.17592664134272e-129 0.000270881069757128 XM_582999.7 SIK3 PREDICTED: Bos taurus SIK family kinase 3 (SIK3), mRNA. 0.0 3140 100.00 0.625 NM_001281748.1 SIK3 Homo sapiens SIK family kinase 3 (SIK3), transcript variant 2, 0.0 1451 77.37 0.63110632183908 TCONS_00060816_2 sp|Q9Y2K2|SIK3_HUMAN SIK3_HUMAN Serine/threonine-protein kinase SIK3; 5e-57 192 96.88 0.940594059405941 0 noncoding 0 0 0 0 -3.93749443658923 0.0112148359551671 0.00184480489376268 0.978958511275673 TTCCAGGGCTCAGTAGCCACTTGTGGCTAGCGGCTTTCGATTTGGACAGGGCAGACAGAGAACATCCCTGTCCTTGAACAGAGTGCTGTTGGACACTGCTGCCCTAAGAGACTCCTCATGGCCTTGAGCCAGGTGCAGCTGGACAACTTGCCTGGCATGAGTCTCGTGGCGGGGAAAGCACTTAGTTCTGCCCGGATGTCAGATGCAGTTCTCAGTCAGTCATCGCTCATGGGGAGCCAGCAGTTCCAGGACGGGGAAAATGAGGAATGTGGGGAGAGTCTTGGAGGTCAGGAGCACCCAGACCTGACAGATGGCAGCCAGCATTTAAACTCCTCTTGCTACCCATCCACTTGCATCACAGACATACTGCTCAGCTACAAGCACCCCGAGGTCTCCTTCAGCATGGAACAGGCAGGCGTGTAGCAAAAGATGGAAAGTTTATGTACAGTGCGGGAATGAAAAGGTTGATTTTAAACCAACAGTATCTAGCAGCATTGCGCCAAATTGCCATTGTTTTCCCTCCACCCAGAATGTCGGCTCCTTTCCTCCCATTTGGTTCATCAGTGTGCTGTTCTTTTGGGTTCTGAGGGGGGTTTTGCCATGTTCGCCTGTATGACCAAGTCACCAAGGAAATAAACAGGAAATCCATGTTCGCCACCTTTTGTGAAAGTGTATTTGGTGTATTTGAGTTGATGGTTTGGTTTGGTTTTTGGTTTGGGTTATTTTTGGTTGTTTTGGTTTTAGGTATGTTTTCTTTGGGAGGTGATTTTCTTTCTTATTTCTTTTGTTTACCTTTTAAGACAGAAGAGCAAAGCAGTTAGCGTATGGTGGCCAGGGCCCAGAGCCATTCCCCTCCCCAGCCTGTCTGCAGAGTGCCCTTCAGTGCCTGAACTGCTTTTACACAGAAGCAAAAGCTGGAGGGCAACATACTCTGGAATGTAGTGGCTGGAGAAAGAGACAAGAGGGAAGGGGCAGCAGCCTTTGGCCCTTGGAGAGCAAAAAGAGACACCCCAAGCCTGGAACCTGGAGAGGTCTTTTCTGCTGGGATCCACTAACAAACATGTCTGGCCAAGCCAAAATCACACAAGAATGTCAGCATGGAGGCTGAGAGTGGCCTGGCGCTGATGGGTTGCCAATTGGAATATCTCTTTGGTGTGTAACTCGGCTCCCCTCTTGTAACTCAGAAAGTTGGTTGCCCTTATCACCCTGCTGGTTCTGCCCGTGGACTGAACACCCAACGGTGGTACTGTGTGTGTGTCACCTTCCCTTCTCATGGTATATTGTGATATAACAAGGGTTGTTTCTCCATGTATATATGTATGTATCTGTACACATACATAATACATACATACATATATATATATCTATATATATATAATGCTTTTCCCTTTCAGCCTCTTTGTCACAGGCAAGAAGAACAGGAGGTTGTCTTGGGTCCTGCCACCCTGCTAACCTTCTCCTCCTCTCTGCGCATCCTCAGCCCCTTATTTTAATTCTTGATCATGTAGGAATTGTTTTTCGTAAATGTTGATATTATTGTTATTATTGTTATTATTATTAATAATAAATACAAACAAAAGAAATTTTTGTTTAAAAGAGAAATGTTTAACCAGATTCTGTTCTATTTGAATTGTGACTTGCACCTTTTGTTCAAAGTATTTTATTTAGACCTTGTAATTGTGGGCGGTTCTCACTCGTGCCAGTGACAGATGTAGTGCCCTCCTTGCGCGCCCCGCCTCCCTGCTGAAGCAGTGCATATGCAATAGCTATTGTTTGTGTCATTATCTTTATTTTCCTTCACCGTTAGAAACCAAAGTCTTCTCTGCTGGCTGGGGGGCTGGCAGAAGATCTGGGTTATCGCCTTCTGATCTTCTGGAAGCAACTGAGAGAGCCCGAACAGCCACTGTTGACTTCTCTGGGCTCGTTGCTGCTCTGACGCCCCTGCTGGCCACGACCACACACTCAGCCTGTTTTGTTCACGGAACTGATGGACGAGCAGACTGCCGCCCCCAGCGAGCACCCAGACGAAAGCCAGTGAGCCTATTAACCGTGCCATCTTGCAAACTACACTTTTAAAAGAATCATTGCTTTGTATTGTAGTAACCAATATGCGCAGTATATGTTGAACGTATATGAATATACTTTCCTACTTCTGTTCTTTGAAAATGTCAGAGTATTTTTTCTTTCTCATTTATGTTGAACTAAAAAAGGATTAAAAAAAAATCTCCAGACCCAAGCTGCAGTAAGACCTTTAGTCATTTTTTGTTGGGCAGTTACAGCTTGGTAACTTGGTTGGACAGTAGGGGATTGTGAAAATAAAACACCTGACTATGATCTTACGCTGATATGTTACTCGCCTTGTGTTTGGAGTCTAGTTGGGAGAAACTTTCAGGCTGGAAGCTGGAATGCGGGAGGCTAAGGACGTGTAGGGTGGGGCCCTGAGCTCTGCTTTATCTCACCTTGCCTAGAGAGAGGAGCATTCTCCAGAAGCCTGAACTGGACCTCACGCTGGGTCATCGGACACCTGGCTTGGACTCTGCCCCCTCAGAAGCGAACACTGCAGTTTGCTGAGTCTGATGGAAAACAGATTCCTTGAGAAGATACTTTTGAAGGAGTAGAAGGAGAACTTCAAAGAGCTGGCAGAGGCTGGGGCGTCTGTGGAGTGACCTCAGTCAACCCAGTGATATGGACACCAACTAAGTGTTAAGATAGAAGGGGACTTTTGCTATAGTTTTCCCCTTTTTCCATACCTGGACTCCAGAGGACAGGGTAGAATTTCTTGGA EMBV3_41556 GTAATGCAAATGACAAGCTGCATTAAGTTTACTAATCAGAACTGCGAAGCAGACTGGTGG Gene BVV0101_063320 + 1 EMBV3_09774 GK000011.2:6660399-6721484 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16000 AGCCGAATTGGATTTGATGGCATGCAGTGGGAAGGCTGGTTTTGGATAGCTGAAAATATG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40198 ATGTGCTTATAATTTGTACCAATTGACCTTTCCTGAAATCATGCAGTATTGAGTCATGTC Gene GeneID:613326|PTP4A1:XM_002689977:4_cdna Constitutive 2 NULL GeneID:613326 9 GENE PTP4A1 MGC179416 protein tyrosine phosphatase type IVA, member 1 EMBV3_19189 GTTTCAATTGCAGTAGAGGAGTCGATGGATTGGTGGGAGAAATGCTGCTTGTCTTGGGCC Gene GeneID:523889|ATP13A3:XM_002684830:158_cdna Constitutive 0 NULL GeneID:523889 1 GENE ATP13A3 NULL ATPase type 13A3 EMBV3_01237 CTGCAGTGCTTTCTTAGGGACATGACAGGGCAAAGCTATTTTTCTGTTGGCTTTGGGCTG Gene GeneID:538743|USP8:NM_001076126:98_cdna Constitutive 0 NULL GeneID:538743 10 GENE USP8 MGC137783 ubiquitin specific peptidase 8 EMBV3_26996 TGTGATTAGAGCCTCTTGCACCATAAAATGGTTAGCCACGGACCCATATAAAACAGTCAG Gene BVV0102_210986 + 0 NULL GK000007.2:51131524-51153751 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26838 AGCCTGTCTTATCTGGGATGGAAGAACAGGGTAGCAGACCACCCATCACCTAGTTTCTTA Gene BVT0102_092604 + 0 NULL GK000005.2:56222836-56231787 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_30105 ATTTTAATCAGGAACGCCGTGGAGCCAGCCTGGACATAAACGATGGGCCCTGTGGCCTGG Gene GeneID:522346|GRAP2:XM_002687937:2_cdna Constitutive 0 NULL GeneID:522346 5 GENE GRAP2 NULL GRB2-related adaptor protein 2 EMBV3_13998 TTATAATCCTATTGATTGTTCTGTTTCTAGCCCTTTCTAAGGCACAAAATGACGTGATGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38135 GTCCAAGAGGCAGTTGAATATCAGGGTAGTGAGCTCGGGAGAAGTGTAGATTTGGGAGTC Gene BVT0102_260110 - 1 EMBV3_07750 GK000012.2:18717381-18844596 12 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_36623 ACGTCCCCTGACTTCAGTTTACCCATCGTGTATTGGGGCCGTGACCTCAAGTTTCAAGAC Gene GeneID:617744|LOC617744:XR_083927:611_cdna Constitutive 0 NULL GeneID:617744 18 PSEUDO LOC617744 NULL hypothetical LOC617744 EMBV3_27606 CCTTGGCCCCCAGAGCCACACTTTTGCCATCCTCTGTGAGATGTTTATCCATCGCCATCT Gene GeneID:526331|GALNTL1:NM_001101127:133_cdna UTR3_Alt 2 NULL GeneID:526331 10 GENE GALNTL1 NULL UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 EMBV3_06977 CTCAGTCACATTTGTGTCTATTTCAAAAGCGCCCTTGGTGGTTCTGAGGTGAGAACTGCC Gene BVV0102_439038 - 1 EMBV3_16809 GK000017.2:18369334-18444869 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00074992 1 XLOC_046470 NonCoding TCONS_00074992 XLOC_046470 NonCoding NonCoding - 17:18373946-18377327 - TSS56674 617 1 TCONS_00074992_2 53 0.238249594813614 3 0.818343195266272 0 0 0 0 0 0 0 0 0 0.000646849169591889 3.71018828817833e-06 0 0 0 0 0 0 0 0 0 0 3.60810620308103e-05 0 0 0 0 0 0 7.86807752047623e-06 0 XM_583477.7 MAP7D3 PREDICTED: Bos taurus MAP7 domain containing 3 (MAP7D3), mRNA. 2e-39 167 85.52 0.233387358184765 0 noncoding 0 0 0 0 -0.103803136692547 0.451927600215661 0.0115130735728796 0.824364328994501 CCGGCATTAGAGCTGGCCTTCTCTGCTACCAACAAGCCCGAGGCAGAGACAGAAAACATACCAGCATCCCACGGATGCCCAGAAACAGAACGATCACAATTATCAAGGACCGTAATACTCCTGACGGAAAACCAGCCCAGGGAGGAATGATCACACAGCCTCTTGGAGTGGGTCTGGGGGAATAAACCAGCTGGGGGAAGCCAAAGTGAGTGTCCTTGGAGCCCAGGAAGGAAGAGGAACTGGAAGGATCTGGATTGGCAAGAGGGAAGAGCCCACTGCGCTCTTCTGTCCATGGGATTCTGCAGGCAAGAATACTGGAGTGGGTTCCCATTTCTGCCTCCAGGGGATCTTCCAGACCCAGGGATTGAACCCATGTCTCCCGCATTGGCAGGCGAGCTCTTTATCACTGAGCCATCACAGGTCCACCAGTATTTGCCAGCTAACTGGTTTTGATGTTCAGAGACTTGGCAGTTCTCACCTCAGAACCACCAAGGGCGCTTTTGAAATAGACACAAATGTGACTGAGAAATCTCTCAGACACTGCGACACCAGCGTGGCCAGCTACTGCCTCCAAGAAATTACTGAGATTTCTACACACGAAGAGAGGAAGATGCACC TCONS_00076770 r 5' 4354 TCONS_00076770 r 5' 4354 EMBV3_14590 ATTAACTGAGGGCGCCGCGCACGCCACTGGACTGCTGACTAGAGTTATGTTACCTATAAA Gene GeneID:511059|FRYL:XM_002688268:8_cdna UTR3_Alt 2 NULL GeneID:511059 6 GENE FRYL NULL FRY-like EMBV3_14426 GAGTCAGCGCACCATCACCGTCGGGGTGTACGCAGAGCAGCCCCCGGACCTGCACTGCGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_09256 CCCTCCAAAACAGCATCGCAAGAGGGCAGAACACAGCAGAGGGGATTCAAATGGACAGAA Gene GeneID:100302389|LOC100302389:NM_001163001:307_cdna Constitutive 0 NULL GeneID:100302389 19 GENE LOC100302389 NULL hypothetical protein LOC100302389 EMBV3_03343 GCTGTGATGTATTTTGCAGTTGGGCTTTTCGGTGCTGTCCCCCTGGCTGGTATATGTTAC Gene GeneID:100337378|LOC100337378:XM_002688621:413_cdna Constitutive 0 NULL GeneID:100337378 7 GENE LOC100337378 NULL olfactory receptor, family 7, subfamily A, member 17-like EMBV3_10167 CCATCTGCGAGCCTCTCCATTACACCACCATCATGAACAAGAAAATCTGCACTTTGCTGG Gene GeneID:788027|LOC788027:XM_002687606:710_cdna Constitutive 0 NULL GeneID:788027 5 GENE LOC788027 NULL similar to rCG29204 EMBV3_30418 CGCGATACACCTGGTTTTGACCACATAAAGGAAACCAATATGCAGGATGGTAGTGTGCAG Gene GeneID:534465|KTU:XM_002690881:312_cdna Constitutive 0 NULL GeneID:534465 10 GENE KTU C10H14orf104 C14orf104 MGC143445 kintoun EMBV3_08077 CCATCTGCAGGAACCACATTATGGATCTTTGTATGGGCACTAGAAAAAGAGAATTCTTCG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05344 CATTCTGCCCGCATTGAAATGTGCAAGACAGCTTTGAAGGACAAACAGTCAGGACAGATC Gene GeneID:532081|LOC532081:XM_002690004:22_cdna Constitutive 1 NULL GeneID:532081 9 GENE LOC532081 NULL similar to Protein FAM135A EMBV3_35270 AGTGCATGGGAAGCTCAGGATGCAGAAAAGCTGCCAGGCCGCAAGTACCGCGCCGGGTAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11304 TATACAACAGAACCAGCCCACTTCCCCCAGGGTAAAATCCAGTACCATGAACATGTCACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22148 CACGGCCTGCTGCTTCTCTTACACTCTGCGGAAGATTCCTCGCAACTTTGTGAATGACTA Gene GeneID:414347|CCL4:NM_001075147:200_cdna Constitutive 0 NULL GeneID:414347 19 GENE CCL4 NULL chemokine (C-C motif) ligand 4 EMBV3_36743 ATAGAAGGTATCTGGCTTGTCTGCCTTGCACTGGTCATGTCACTGCTCCTTGTTAAGGCC Gene GeneID:513852|PM20D1:NM_001038100:58_cdna Constitutive 1 NULL GeneID:513852 16 GENE PM20D1 MGC133795 peptidase M20 domain containing 1 EMBV3_13709 AATCAAGTGGACCTGCATATTAGAACATCCCTCAGCACTGAGAAGGCCGGGTAACACTCG Gene GeneID:540836|RGS1:XM_002693928:26_cdna Constitutive 0 NULL GeneID:540836 16 GENE RGS1 MGC152252 regulator of G-protein signaling 1 EMBV3_43794 GAGGAACCTCCACAGTAAAGAGGAACCACAAACTGCCAGAATTCAGAAAGGCCACCCCAA Gene BVT0102_187942 + 1 EMBV3_29289 GK000018.2:50453117-50535167 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213731 TCONS_00251170 TCONS_00253035 TCONS_00249258 4 XLOC_130524 XLOC_154113 XLOC_155976 XLOC_152201 NonCoding TCONS_00249258 XLOC_152201 NonCoding NonCoding - X:12429412-12429655 - TSS186479 243 0.995884773662551 1 0 0 0 0 0 0 0 0 0 4.63852477706841e-06 0 0 0 0 0 0 0 0 0 0 0 0 4.36253173800198e-06 0 0 0 0.00139556252966669 0 0 0 0 XR_229334.1 LOC101906442 PREDICTED: Bos taurus uncharacterized LOC101906442 (LOC101906442), 2e-26 122 72.22 0.934156378600823 0 noncoding TCATTGCACTCCAGAGAGAAAAGATCCAGCTCCACCCACCAGAACACCGACACAAGCTTCCCTAACTATGAAACCTTGACAAGTCACTCATCCAACACCACATACACCGAGAAACCTCCACAATAAACAGGAACCACAAACTGCCAGAATACAGAAAGGCCACCCCAAACACAGCAATCTAAGTGAGATGAAAAGTCAGAGAAATATTCAGCAGGTAAAGGAACATGATAAATGCCCACCAAA TCONS_00246270 . 5' 269904 TCONS_00246270 . 5' 269904 EMBV3_39771 TAAATACTTCAAGTCATTCAAAGACAGATGACAAACATCATATCTGAACTAAGTAAATGG Variant GeneID:533555|MGC157319:NM_001102158:24_cdna 437^630 1 EMBV3_13413 GeneID:533555 10 GENE MGC157319 NULL hypothetical LOC533555 EMBV3_33090 TAGACTGAGGGGACTTCTCAAAAAGCTGTCCAACCCAGGGCATCTGGGGCCTAACCAGAG Gene GeneID:534312|SCAMP2:NM_001102170:118_cdna Constitutive 2 NULL GeneID:534312 21 GENE SCAMP2 MGC166390 secretory carrier membrane protein 2 EMBV3_02393 GGAATATTTAGTGCCGGTTAGCTCGGAGAGATTGGTCCATCTACAGTACTTCAGAGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37383 TCTTCTAGCGTCTCCGGCTCCCTGCAGCAGGCAAAGGGGAAGATAGCGATGTACTCAGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_03286 ACCTGGAAGCCCTTCATCGGCTACGACTCGCTCCAGCTCCGTGGAGGACGAAGACGAGGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18213 CCAGAACTTGTACCCAGGCTTAGATCACAGAGGAATGGTTTGGAAAACAGTAACACTGGC Gene BVT0102_235182 - 1 EMBV3_43202 GK000013.2:66353756-66362561 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00049721 1 XLOC_029852 NonCoding TCONS_00049721 XLOC_029852 NonCoding NonCoding - 13:66355658-66357836 - TSS36897 2178 1 TCONS_00049721_4 101 0.463728191000918 1 0 0 4.61361607781182e-06 3.82396339924877e-05 0 1.81346622060698e-05 5.58401520167513e-05 1.87428891153107e-05 9.05221349763953e-07 0 0 0 0 0 0 0 0.000169771561861926 9.90952894725603e-05 4.60806234391316e-05 0 0 0 0 0.000252727810914073 0.000346377421374069 0 9.70449402565342e-06 8.07045994669337e-06 0 0 0 XM_005194688.1 SLC1A2 PREDICTED: Bos taurus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant X1, 2e-52 212 83.74 0.0918273645546373 NM_001253799.1 ZNF331 Homo sapiens zinc finger protein 331 (ZNF331), transcript variant 4e-29 134 69.28 0.152433425160698 0 noncoding 0 0 0 0 -0.109487322940962 0.482810502464956 -0.0108945197046075 0.885759252239271 CCTGAAACTTTAGAGAATAAACTCAGGGGAGATGTGGAAATAATCATCACTACTGCCAGTGTTACTGTTTTCCAAACCATTCCTCTGTGATCTAAGCCTGGGTACAAGTTCTGGCTCTGTCACTTAATTAGCTGTTATGACCACAGGCAATTTGGTCTACCACTTCCAAGCTTCAGTTTCCTCATCAGTAAAAAGGAACAGTAATACTCATCTTTTCAGAGAATGAAATAGGATAATCTGTATGTTACTGTTCTTACCTGGCTTCTCTGCACAGGGCTGAGAGTAATACAGAACGATTAAAGTAACTTGCCTAATACCACACAGCTTCTAAGTGGCAGAACTGGGACTGATGGCCCAGAGAAGTAGTCCTTATGCATCAAGAGAGCTTACAAAAGTGCGCTGACCTTACCCCCAGAGAGTCCAGGAATCTGCACCCTTCAGTGATGCCAAAGAAGATTCTCTTGCTGCTGCTCCAGGGACCTGATCATTTATAATCAGGGTTCTGATTTACCCAAGGAAACTTGGGTTGGGAAGACAGCATATCATCTTTCCAAGTTACAAGGTGAGAAGAAGGCTACCACCAAGTAGTCCCCTAAAACCATTCGACTTCTCAAAGCTGTAGCGGCCTGAAGGTTAAGTGTAGCCTTCTTGAGATGGTCATTTTCATTACATAAGTAGTCCACATTCACTACAAATTTTAAGTAAAGGTACAGTAATCTCCCACCCATAGTTTTACTTTCCACATTAATTTATCCACGGTCAACCTTGGTCTGAAAATATTAACTGGAAAATGCCAGAAAGAAACAGTTCATGAGTTTTAAATTTCATGCTGTCCTGAGTAGCATAATGAAATCTCCCACCCTCCAGGCCTGGGACCTGAATCACCCCTTTATCCTGTTTGTTCATGCTGTATATGCTACTCACCCCACCTGTTCCTCAGGAGCCTGCCTGGTTATCAGATCCACTGTTGCTATACTGTGCTTGTGTTCAAGTCACCCTTATTTTATTTAATAGTGGCCCCAAAGTACAACAGTAGTGATGCTGGTGATTCAGATCTGCTCTTACTGTACCTGACTTATGAATTAAGCCTCATCATAGGTATGTACACATAAGGAAAACATAGTATACCTAGGATAGCCACAGTTTCGGGCATCCACTGAAGGTCTTGGAACACATACTCTGGGGATAAGGGAAGGACTACTGTTTATAGGAGAGGAGTTCAGTATAATGACTAAGATCCCAGCCAGCTTTGGGAGAAAAACAAATGTATGTAAAACATTTAGTAAAGCTGGCACCTGGTAAGGGATCAGTGGGCTTCCCAGGTGGCACTAGTAAAGAACCAGCCTGCCCATGCAGGAGACAAGAGGCATGGGTTCAATCCCTGGGTTGGAAAGATCCCCCTGAGGAGGGCATGGCAGTATACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGGGGAGCTTGGCAGGCTACAGTTCTGTAGGGCTGCAAAGAGTCAGATACAACTGAAGCAATTTAGCCTGCACACATGCCAGGGCTCAAAAACGCTAGTAAAATATTTCTTTTAGGCAAAAAGAAGCAACTCGGGCCTCTAGTTCACAACCAGTGCTCTCTTCCCAGCACCTTAGTTTTTCCCCCCCAGGGCACCTGGTTTCTGTGATTCCATCTGTTTCTCTCTGAGGCCACAATCTTGCCCCTCAGAGCATACCTCCCTCCAAACCCTGCTACAAGCAGCTGCAGCGTTACAGGGGCATTCAACTGAGAGAACACTCTCGGTCCCAAGAGTGACATACGTTTAACTGGTGCTAAAAAAAACAAAAAAAAACACAAAAACCCAACCTTACAAAGCCAAAATTTCTCCTTCCAAATCTGACTCTTCATCAAGTTCTTTTCCATCTAAGACCACCCAAGACGTTTATTTTAACCAGATGGATCCACTGGGTTTCAGCCAAATTCCCCACTTCCTAAGATAAGGAAAGCTTTGGGTGAAAGGAAGAAAGGGAACCAGTCTCAGTGCCATGAATGCCTTCTAGGCAAGGACCTTCCACGCTGCCAGCTTGGCTTTGTCTGCTCCTAGAAGGCTAAGGGGCTTCCCTGATAGCTTAGCAGGTTAAGAATCCTATAATGCAGGAGACCCGGGTTCCATCCCTGGGCTGGGAAGATCCTCTGGAGAAGG TCONS_00043649 TCONS_00043652 TCONS_00043653 TCONS_00043650 TCONS_00043651 TCONS_00043654 . 3' 226 TCONS_00043649 TCONS_00043652 TCONS_00043653 TCONS_00043650 TCONS_00043651 TCONS_00043654 . 3' 2403 EMBV3_41819 AATTACTCCATCTATGGCCGCAGCGCGGTGGGCAGCTTCTGCGAGGACCTCAGCAAGACA Gene GeneID:510060|MGC128071:NM_001035084:25_cdna Constitutive 0 NULL GeneID:510060 5 GENE MGC128071 NULL sperm tail protein-like EMBV3_14583 AGGATGGGAAGGCCTGGCGCACCTGACCGGGGGTTTGCCTTCGTGCTTATTTCTCAAATA Gene GeneID:100299249|LOC100299249:XM_002684004:8_cdna Constitutive 0 NULL GeneID:100299249 Un GENE LOC100299249 NULL similar to interleukin 3 receptor, alpha EMBV3_05196 CCCGGTGCTTGGAGAAGAGACATCTTTGGAAGAATCATCTGGCACAAGTTCAAGCAGTGG Gene GeneID:534317|MRPL47:NM_001076901:20_cdna Constitutive 0 NULL GeneID:534317 1 GENE MRPL47 MGC142402 mitochondrial ribosomal protein L47 EMBV3_34225 ACATGGTGGAGCTGTAATCTGGTCCTCGGTGTACTGCAGGATGTGGTTGATGAAGGTTTC Gene GeneID:789017|LOC789017:XR_084647:75_cdna Constitutive 0 NULL GeneID:789017 23 PSEUDO LOC789017 NULL similar to RAS-responsive element-binding protein 1 (RREB-1) (Raf-responsive zinc finger protein LZ321) (Zinc finger motif-enhancer binding-protein 1) (Zep-1) (Finger protein in nuclear bodies) EMBV3_03138 CGGAGGGTGGCATGTTTAGGGGGAAGGAACGGACCACAGGATTTCAGCTTCACTCAAAAT Gene BVV0101_037500 + 0 NULL GK000023.2:33036039-33038549 23 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00135002 TCONS_00135003 TCONS_00135005 TCONS_00135008 TCONS_00133274 TCONS_00135010 TCONS_00133277 TCONS_00135009 TCONS_00133278 TCONS_00133279 TCONS_00133272 TCONS_00133270 TCONS_00135004 TCONS_00135006 TCONS_00135007 2 XLOC_081611 XLOC_081077 Coding TCONS_00133272 XLOC_081077 Coding Coding GPLD1 23:32976797-33038648 j TSS99577 5454 1 TCONS_00133272_6 843 0.0669233590025669 27 0.912255456750202 9.04742775244656e-05 2.88539118521736e-26 1.89840017373309e-36 0.000184229653863368 4.74322372059454e-164 1.44173202240461e-316 1.63046119588438e-34 1.89268468865974e-30 1.41611474723557e-51 0 7.50506357401868e-18 2.28739232316444e-142 6.38340640366081e-23 9.95642686705267e-105 2.92455142678463e-22 0.0104155687368856 0.00117002008014589 0.00322392475742566 2.04705756562328e-66 9.74370121814003e-22 1.82411811520845e-22 0.00229746776960955 0.00317824828322643 0.00370717261355519 0.000125586461367141 0.000238965740391703 3.20299790767524e-30 0.000155963386160199 1.8912118126402e-08 9.19864717039118e-29 XM_005223738.1 GPLD1 PREDICTED: Bos taurus glycosylphosphatidylinositol specific phospholipase D1 (GPLD1), transcript variant X3, mRNA. 0.0 6798 99.95 0.691785845251192 NM_001503.3 GPLD1 Homo sapiens glycosylphosphatidylinositol specific phospholipase D1 (GPLD1), mRNA. 0.0 2897 82.65 0.518518518518518 TCONS_00133272_6 sp|P80109|PHLD_BOVIN PHLD_BOVIN Phosphatidylinositol-glycan-specific phospholipase D; 0.0 1719 99.04 0.98932384341637 3 coding 0 0 1 1 -0.0493211147179192 0.742489806416646 0.0221273348161585 0.656062152462485 CCGAGGGCGCCAGCAGGCTTGGCTTCCTGCGCGACCTGGGAAGGATCGCGGATGCGAATGGGAAAGCTCGCTGGAATCTGACCAGGCAGCAGGTTCTGGATAAGTGCTCTAAGAACAGCCGGGGAGAAAGAGACCAGGAGAAGTTGCTGTTGTGTAATCCCATGCAAGTGTCATTATCTGTTGCCAAATACTGAAAGAGAAGCTGGTTCCAACTGATCATCATAAAACCTTTCCCAGCACTTGTGGCTGCAGAGGCCGAGGAAGCAGGGCAACCAGATATATGTGCGGAAAAAATGCAAGAGAAATCGACTCTTGTGAGATTCTGGTCAGGACTGCTGATGCTACTGGGCTTCCTCTGCCCTAGAAGTTCACCATGTGGCATTTCGACACACATAGAAATAGGACACAGAGCTCTGGAGTTTCTCCACCTTCAGGATGGGAGTATTAACTACAAAGAGCTGTTACTTAGGCACCAGGATGCATATCAGGCTGGATCCGTGTTTCCTGACTCATTTTACCCTAGCATCTGTGAGAGAGGACAATTCCATGACGTGTCAGAGAGCACTCACTGGACTCCATTTCTTAACGCAAGTGTTCATTATATCCGGAAGAACTATCCTCTTCCCTGGGATGAGGACACAGAGAAACTGGTAGCTTTCTTGTTTGGAATTACGTCTCACATGGTGGCTGATGTCAACTGGCATAGCCTGGGTATTGAACAAGGATTCCTTAGGACGATGGCTGCCATTGATTTTCACAACTCCTATCCCGAGGCACATCCGGCTGGTGATTTCGGAGGAGACGTGTTGAGCCAGTTCGAGTTTAAATTTAATTACCTCTCACGGCACTGGTATGTGCCTGCTGAAGATCTCCTGGGAATTTATAAAGAACTCTATGGCCGAGTAGTCATCACCAAAAAAGCCATTGTTGACTGTTCATACCTTCAGTTCTTGGAAATGTATGCGGAGATGTTAGCTATTTCCAAGCTTTATCCCACTTATTCTGTAAAATCCCCATTTTTGGTGGAACAATTTCAAGAATACTTCCTAGGAGGGCTGGAAGATATGGCGTTTTGGTCCACTAATATTTACCATCTGACAAGTTACATGTTAAAGAACGGGACCAGTAACTGCAACCTCCCTGAGAACCCTCTGTTCATCACATGTGGCGGTCAACAAAACAACACCCATGGCTCAAAAGTACAGAAAAATGGTTTTCATAAAAATGTGACTGCAGCCCTAACTAAAAATATTGGAAAGCATATAAACTATACCAAAAGAGGAGTGTTCTTTAGTGTGGATTCCTGGACCATGGATTCCTTATCCTTCATGTACAAGTCTTTGGAGAGGAGTATACGGGAGATGTTTATTGGCAGCTCTCAGCCACTGACACATGTTTCTAGCCCCTCAGCATCTTACTACTTGTCATTTCCCTACACAAGGCTTGGTTGGGCAATGACTTCAGCTGATCTCAACCAGGATGGATACGGTGACCTGGTGGTGGGTGCCCCTGGCTACAGCCACCCAGGCCGCATTCACGTGGGGCGCGTGTACCTCATCTATGGCAATGACCTGGGCTTGCCCCCTGTCGACCTGGACCTGGACAAGGAGGCCCACGAGATCCTGGAGGGTTTCCAGCCCTCAGGTCGATTTGGCTCGGCTGTGGCTGTGCTAGACTTTAACGTGGATGGCGTGCCTGACCTGGCCGTGGGAGCCCCCTCGGTGGGCTCCGAGAAGCTCACATACACAGGTGCAGTGTATGTCTACTTCGGTTCCAAACAAGGACAACTATCTTCTTCCCCCAACGTCACCATCTCTTGCCAGGATACCTACTGTAACTTGGGCTGGACCCTCCTGGCGGCAGATGTGAATGGAGATAGTGAACCGGACCTGGTGATTGGCTCCCCTTTTGCTCCAGGTGGAGGGAAACAGAAGGGAATTGTGGCTGCATTTTACTCTGGCTCCAGTTACAGCAGCCAAGAAAAGCTGAATGTGGAGGCTGCCAACTGGATGGTGAAAGGCGAGGAGGACTTTGCTTGGTTGGGGTACTCCCTTCACGGTGTCAATGTCAACAACAGGACTTTGCTCCTGGCTGGAAGCCCGACCTGGAAGGACACCAGTAGTCAGGGCCACTTGTTCCGCACTCGTGATGAGAAACAGAGCCCTGGACGGGTGTACGGCTATTTCCCGCCAATCTGTCAAAGCTGGTTTACCATTTCCGGAGACAAGGCAATGGGGAAACTGGGTACCTCCCTGTCTAGTGGCCACGTGATGGTGAACGGGACCCGGACCCAAGTGCTGCTGGTGGGGGCCCCGACTCAAGATGTCGTGTCTAAGGTATCATTCCTGACCATGACCCTGCACCAAGGTGGGAGCACTCGGATGTATGAACTGACACCTGACTCACAGCCTTCTCTGCTCAGCACCTTCAGTGGAAACCGCCGCTTCTCCCGATTTGGTGGCGTTCTGCACTTGAGTGACTTGGATAATGATGGCTCAGATGAAATCATCGTAGCAGCCCCGCTGAGGATCACAGACGCAACTGCGGGACTGATGGGGGAAGAGGATGGCCGTGTTTATGTGTTTAATGGCAAACAGATCACCGTGGGTGACGTGACAGGCAAATGCAAATCATGGGTAACTCCGTGTCCAGAAGAAAAGGCCCAATATGTACTAATTTCTCCTGAAGCAGGCTCAAGGTTTGGGAGCTCTGTGATCACTGTGAGGTCGAAGGAAAAGAATCAAGTCATCATTGCTGCTGGAAGGAGTTCTCTGGGAGCCCGACTCTCTGGGGTGCTTCATATCTATAGGCTCGGCCAAGATTAAAGGTTTCACTCCATTTTCCTCACCTGTCCCCCTCTCTCATGCTGAGTCATCTTCCGGGTGAGCGTTCTGGGGGACAAAGTGGCGTATCCAGGGGAGCCCTGGTAGCCCTACGACAGGTGGGGGCTCCTGGGGTGGAGACACACACAGTCTGGCTGCCAACAGGCCACAGAAGTGGTGACAGCACCCGAAGCACGTGGAACAGTGGATGCTCTGGTTAGCCATGTCCCTTTGCAAAACTTGTTTCCTGTGCACCTGAACTTAATTCCTAACTGGCTTCCTGTGCTCAGACCTGCTGCAAAACCCGTTTCCTCTTCCACTTGAGCACCTGTGTCTTTCTGATGCCTATAGCACAATTCTTGCTAAAAATGTCCTCTTAAAACTGGTGACCCATTCCAATCAAAGTGAAACAGAAAGCACAATAAACAGGAAAAAAGCATGAGGAGAGAACGAGGAGACAATATGGGGGGTGAGGCATAACCTCACAACTCCAATATCACGTTGTAAATGATGTGGTCCTTTCTTAGGAGGACTATTGTATTTTCAGTGTTTCATACAGTGAAGGGCAAATATAAAGAGTAAAACATCACCTGACTGTGCCCTCAGATGCTTTTGGAGAAATGATTGTTCCAACAGCCGATGCACCTAGTGATCTGCGTATCTGAAGTCATCTCAGGAAGCCTCAGGCAGCGCGAGGCTGCCACAGGCCTCACCAACAGAACCAGAACAGGAAGGAGAGAGATCTGTCTTGAGCTGAAGGTGACTGTGTGGGACCAAAAGGACTGAGGCAGGCTTGGCCTCCCTACTTCCGGGGCTGGTCTCAGTGGGCAGGTCTCATCTGCCAGGCCCGGAGGGTGGCATGTTTAGGGGGAAGGAACGGACCACAGGATTTCAGCTTCACTCAAAATCTGCGGGCACTGTTATCCGTAAACTGTAACTAGTTGATTCTCTATCAGGGTACAACCTCTTTTCTTCTGACACTAATGAAATGATTCTAAAACCAGGAAAAAATTAAAATGACCAGAGCCCTTCTCTTAGCTTCTCTTGGGGCAGTAAAGAGACTGGTTAAAGGACACAGGGTTTCGGCTGAAGAGTTAAGCTGAATTCGAAATCAAAGGAAAAACCAGTAGAATTACAACTGTGAGGATATAGTGAATGTGTATATAGGAAAACAGCATAACCAGGCTCACACCTAGACAGGACCTCTGGCTCACTCCCAGGACCATCTCCTCTTTCTGAAAGAGGTATACTAGCCGCATGGTTCCTACGGCGCAGCACAAAGCACAGAAACACCACTTGCTTTTCGGTTAACAACTATTGGCTGCTCAACCTATTTGAAGAATTGTTTTTATTAAAGTTTATTTTTAGGGGACCAGAAACGCCTTACTCATATTCCCTTATTCTGAGTGAAGACCAAGCTGATGATGCTGCATTTCAGTAAAGGCATGCTCTCGTACTGCGTCTCTTCATTTAGAAGGATGCGTACCTTCATTGGGCTGCTAAACAAAGTGTTACGCTTTACTAAATGATTGGGCCAGTGTTTAAACATGACTGTTCTTTACCTGAGGAGTTATATTTTTCTTAATGCCTAAACATAACAGCAACCAGCAAGAGGAGACGGTTAAAATTTACTAAGTTAGAAGCAGATCTTCATATAGGATATTTAACCACGCTAACCTGTATCAAGAAATTATATAAATTGTATCCTACCGCATATATGGAAAATATGTAAAAACCTGGCATACAGAAAAAAAAATCTAATATCCAACAGACTAATGTATTATCTTAACAGGTGGATTAAGTTTCCATTCTACACTAAATTAATTCTAAGCACTGGTCTGACTTCAGGTCAGTTGCTCAGTCGGGTCCAACTCAGTGTGACCCCATGGACTGTGCCACGCCAGGCCTCCCTGTCCATCACCAACTCCTGGAGTTTACTCAAACTCATGTCCATTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTTGTCCCCTTCTCCTCCTGCCCTCAATCTCTCTCAGCATCAGGGTCTTTTCAAATGAGTCAGCTCTTTGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCATCAGTCCTTCCAATGAACACCCAGGATTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAATACCACAGTTCAAAAGCATCAATTGACGCTTTTGAATTGATTCTGACATACTTAATACTTTATAGGGTTTAAATCTCTCAGGAACACAAATCTGAACTTATACAACAATTTAATTCAAAATTACCTTTATGATATCAGAACACATTTACATATTTGCAATTTTTGTCTATTACCTGTATATGCAAAGACTGTCTTGTCTTACAGGCTTCAAGACTGGAATTGATTTATGCCTTTGTATCACAGAGCTAGAGAGATTTGAAGTGAGTTTGGGAATAAATTCAGGTCTCTGAATTCCCTATTCCATGCTCCAACTACATAACTGTTACCAAAGTAATGACAGTAAATCCTGAATTTAAAGTGAGTTTAATATTTAATATTAATTTTCCAAAACATAAAGCTGTGTACAAATCTTGGAATAACTCACCAAAATATACGGCTTTTTAATG EMBV3_36438 GAGACTCACCCTATTACTTCTTGACTTCAGACATTCCTGAACCCCTGGTATGAGGCCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_12346 ACAGAATCAGATGTGACCCAGGATGGAGCAACCTTTCTGAGGGTCAAGATTGTCCGGGGT Gene BVV0102_389661 + 0 NULL GK000009.2:104038105-104123900 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00243202 1 XLOC_149865 NonCoding TCONS_00243202 XLOC_149865 NonCoding NonCoding - 9:104080641-104081020 - TSS182880 379 1 TCONS_00243202_1 110 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000209062406988624 0 0 0 0 0 0.000215375731468657 2.42059404163023e-05 0 0 0 0 0 1.28089802277871e-05 0 0 noncoding 0 0 0 0 -0.0164253180357142 0.871633944604326 0.0520514542010289 0.489935545301707 CTTTATTATTGGCCCAGATGTACCAAAGGTGTCTATTTTCAATGGAAAACATACTTTGCTGGGCTGACATTCTCTGGGCTTTTGGACTCGTTCCTGCCCTGAGCCGGGGGAGGGGGCCCTGGCAGAGGGCAGACGTGAGCTGGAAGGTCTGTCCTTGGGCCGCAGCCTGGCTCCTCCTGGAAAGGGGCCAACAGCTCCCGTCCTCTGTGTGGCCCCAACTGCCGCTTCCTCACACCCAGACCGCTTGCCGCGTTCAACCGTCCCCAGTGGAAGCATCGCCACACTCTTTCGGTATTACCCCGGACAATCTTGACCCTCAGAAAGGTTGCTCCATCCTGGGTCACATCTGATTCTGTCCCAGGCGCCGTTCTGAGCCCAG TCONS_00238253 . 5' 42538 TCONS_00238253 . 5' 42538 EMBV3_05912 GCTTTGAGAAGCCAGAGGCTAGAGGCCTTTGAAGCTAGACCAAACTCTCTCCCAGGAAAA Gene BVT0102_172889 + 0 NULL GK000010.2:72768792-72878883 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10926 GACTTCTCACCGCCCACCTCTGGAGCTTACATACTGTTCTGGGGTTTGTTCTCTACCCTT Gene GeneID:538428|DEDD:NM_001034643:326_cdna Constitutive 0 NULL GeneID:538428 3 GENE DEDD MGC127710 death effector domain containing EMBV3_09549 CGAGTGGACTTGGGCCCTATTCAGGCAAGATTTAAAAAAAAAAAAAAGAATGTGAGCAAA Gene GeneID:538792|ZNF521:NM_001105419:10_cdna Constitutive 0 NULL GeneID:538792 24 GENE ZNF521 MGC160015 zinc finger protein 521 EMBV3_33231 CCGGGCCCATTAATTCAGGTGTTCAAGCAGGACTCTTCTCTGAGAGGTCTTTGGTATGGA Gene BVT0102_133578 - 1 EMBV3_03530 GK000008.2:103831671-103906599 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228951 TCONS_00228952 1 XLOC_138620 Coding TCONS_00228952 XLOC_138620 NonCoding Coding - 8:103833284-103902092 - TSS170563 686 1 TCONS_00228952_1 136 0.161807580174927 2 0.990059150958478 0.00116429821010263 0.000644506644928343 0.00284920096900305 0.000316324277037581 0.000736930684369002 6.16256998092597e-22 5.18340361396103e-25 0.000120708506487555 0.000241534303174754 0 0 0 1.96929416911235e-05 0.000172559003252544 0 0 0 0 0.00348508814930715 0.00089616691875408 0.000248850644775692 0 0 1.69886670876333e-16 0.00206560451822027 0.00231786029211345 0.00011981074525026 0 0 0 0 noncoding GGGTCTGGGATGAAGCTTGAGATTCTGCCTTCTAACAAGCTCCCAGAGACGCTGCTACACCATCGTGGGAGACAGGAGACACAGGTTCCTGCTTGCCTGAGCTGCGTCGGGGTTAAGCAGACAGGGAGAGAGCTGGAGTGTTCTGACTTTCCACCCCTGGGGATGATCCTGAAGAAGAAACGTTGCTCTCTGTGCTGCTCCTTTGCCCCAGTACCACCCATCGCCCTGGTCCTCTTTGCAGGAGTGTGTACAGGAAGCAAGCAGCCAGAGAAACCCGTCTCCACCTATCCAAGGCAGCGAGCCCATGAAATGGAAGAAGAACTGCAAAGAAAAGAGAAAGGGTCCTGGGGACTTTACTCAGAAGCAAATAATCCTGGTGACTCTTTTTGTGGAATCTGCCCCTGCCAGAGTCCAGTTTAGCATCTGTAGGGACATGCCGGGCTGACAGGACCTCCCCGTCTCTTTCTCGGTCCTGCGGTTTGAGGCCAAAGCCTCCAGGCTGGGACCTATGCTGGCCTGGGTCCTGTCCTGGCTCCGGGCCCATTAATTCAGGTGCTCAAGTAGGACTCTTCTCTGAGAGGTCTTTGGTATGGAAGAAGGGCTAAGCATAGCTTCTCCTGAGGTTTTTGTTTGTTTTTTAATTATGGTAAGAATACTTAACATGAGACCTCCTCTCTTAACAAACC TCONS_00228950 s 5' 1615 TCONS_00228949 s 5' 0 EMBV3_15326 CCACGTTCTCTATGGAATGCCGTCCCAGCAACGCGTCAGAGCCAAAGAAAAACTCCAGTA Gene GeneID:768085|RNF112:NM_001077139:117_cdna Constitutive 0 NULL GeneID:768085 19 GENE RNF112 MGC143075 ZNF179 ring finger protein 112 EMBV3_39639 TGTGAAAAGTTGCTACAGACCTGTTTCTCCACCCCAACTGATGACAGCATGGATCGGTGA Gene GeneID:512757|HSPBP1:NM_001046131:163_cdna Constitutive 1 NULL GeneID:512757 18 GENE HSPBP1 MGC128574 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 EMBV3_34351 CTCTCTTTGGAGTGGTGGACATGGTGGATGTAACAGAGGACTTCCTGGTCAAGGCTAAGA Gene GeneID:617042|METTL11A:NM_001038217:208_cdna Constitutive 0 NULL GeneID:617042 11 GENE METTL11A C11H9orf32 C9orf32 MGC134060 methyltransferase like 11A EMBV3_15775 GCAACAAAAAGACGCTTTCCAGTTTGGATTATCAGTCATGCTGGGCATGCCTTAGCCCCC Gene GeneID:534992|C2orf43:NM_001079608:174_cdna Constitutive 1 NULL GeneID:534992 11 GENE C2orf43 NULL hypothetical protein LOC534992 EMBV3_41597 CCTAAGAGACATTTTGTCAGTAGAGGAATTTCATTGATGAGGTTATAGCACACCCCAAGG Gene GeneID:527910|SKIL:XM_002684924:62_cdna Constitutive 0 NULL GeneID:527910 1 GENE SKIL NULL SKI-like oncogene EMBV3_36476 TAGGCACTCTGGCAATTAAGTCATCCTCCAATTGCTATACCTACATTTTATGGACGAAGG Gene GeneID:533479|PREPL:XM_002691299:405_cdna Constitutive 0 NULL GeneID:533479 11 GENE PREPL NULL prolyl endopeptidase-like EMBV3_22099 AGGAACGACAACTATCACGATTTGTGTAGCTAGTCCTCCGTTCCCAGGCTCTATGGGGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_40168 ACGCTCATCAGCCAGGAGAGCTGTGAGAAAAGCGAGCCTCTCCTGATACCTGAGAAGATA Gene GeneID:539653|PCDHGA5:XM_002689236:105_cdna Constitutive 0 NULL GeneID:539653 7 GENE PCDHGA5 NULL protocadherin gamma subfamily A, 5 EMBV3_31201 TGGGAAGGTCCCACGTGCTGTGGAGCAACTAAGCCCGTGTGCCACAACTACAGAGCTGTT Gene BVV0102_313327 + 0 NULL GK000029.2:49728474-49817286 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00164223 1 XLOC_100157 NonCoding TCONS_00164223 XLOC_100157 NonCoding NonCoding - 29:49785878-49787521 - TSS122926 1643 2 TCONS_00164223_4 131 0.772976262933658 1 0 0.000378914035690009 0.000171245360485044 0.000123323534495547 4.71037557752484e-05 0.00014016071669167 9.3617252564278e-05 1.09816613578765e-05 5.62042872665554e-06 2.59801851150737e-05 0 0 0 5.98846266044687e-12 1.23099488224572e-11 0 0 0 0 0.000200651407481985 4.75565762414718e-05 1.1466535382027e-05 0 0 0 3.42846654935633e-05 6.20710411369523e-05 0.000179065442030626 0 0 0 XM_005221991.1 C21H15orf17 PREDICTED: Bos taurus chromosome 21 open reading frame, human C15orf17 (C21H15orf17), transcript variant X1, mRNA. 3e-118 430 93.64 0.171637248934875 0 noncoding AGGAAGTGGTAGATGAAACTGAGTGATGGGAGTTTCCAGGTGAGAATCTTTGATGAACTTCCCAGGTGGCTCAGTGGCAAAGAATCCGCCTGCAATGCAGGAGACACGGGACATGTGGTTTGATCTCTGGGTTGGGAAGATTCCCTGGAGAAGGGAATGGCAACTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCCTGGGGTCGCAAAACATTTGGTGACATGACTTAGCAACTGAGAGCTGAGATTCTACAGATACACCTCAGAAAGTGGAATAAGAGAGGGGCTTCCCTGATGGCTCAGTGGTAGGGAATCTGCCTGCCAGTGACGGAGACGCGGGCTCAGTCCCTGACCTGGGAAGATCCCACGTGCTGTGGAGCGACTAAGCCCGTGTGCCACAACTACAGAGCTGTTGCTCAGAGCCAGGAGCCACAACTGCTGAAGATCTGAGCCCTGGAGGCCCTGCTCCACAGCAAGAGGAGCCACCACAGCGAGAAGCCCGCACGCTGCAGCTGGAGAGCAGACCGTGCTCGCCGCAACCAGAGAAAAGCCCGTGCAGCCAGGAAGACCCAGCAGAACCAAAAATAAAGAAATAAATTAGATTATCCAAAAAATTAAAAAAAGAGAGGACTTGGATCAACATTTACGCTTAGAGAATATCAATGCTGCTGCTGCTGCTAAGTCGCTTCAGTCATGTCTGTCTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAAAGCATGAAAGGGAAAGGTGAAAGTGAAGTCACTCAGTCATGTCTGACTCTTCGCGACCCCATAGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAAGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGAGAGAATATCAATACCTTTCAGGAAAACTCTTCTTGTTTGCTTCCTGTTTTTCTTAGATTTTCCCCAGTTACACAGGAACCAATTAGACTGTCAGTTGAATGTGAACAGAAAGACTGCATCCACAATACCGACACTGACTCGGCTGTGATGCGGTTGTTAGTGTTGCCGAGCTAGGCGTCGTGGGCCTGTGTTTAAAACAGTGCTTTTCTGTTGGTGGGAATGTAAACTGACACCGCCACTATGAGGAACACTGTGGAGATTCCTTTAAACACCAGGGATAAAACCACCATATGACCCAGCGATCCCACCACTGGGCATATGTCCTGAGAAAACCATAATTCAAAACGACACATGTACCCCAGTGTTCACTGCAGCACTACTTACAATAGCTTAGGCATGGAAGCCAAAGACGGAGAAGCTCTATACAGTCAGCAAAAACAAGACCGGGAGCAGACTGTGGCTCAGATCATGAACGCCATATTGCCAAATTCAGACTTAAATTGAAGAAAGTAGGGAAGACCACTAGACCATTCAGTTCAGTTCAGTTCGGTCGCTCATTCGTGTCCAACTCCTTGCGACCCCATGAATTGCAGCACGCCAGGCCTCCTTGTCCATGACCAACTCCCAAAGTTCACTCAGACTCACGTTCATCGAGTCAGTGATGCCATCCAGCCATCT TCONS_00164222 s 3' 3980 TCONS_00164222 s 3' 3980 EMBV3_04455 ACCAACGGGAGCATTGTGGTCGTCTCCTCCATAGCCGGGAAAATAGCTTGTCCACTTGTT Gene GeneID:282589|HSD11B1:NM_001123032:22_cdna Constitutive 3 NULL GeneID:282589 16 GENE HSD11B1 NULL hydroxysteroid (11-beta) dehydrogenase 1 EMBV3_37452 CTGCAGTTGTTCTCTTGTTGTGGAGCAAGGGCTCTAGGCAAGTGACTCAGTAGTTGTGCT Gene BVV0101_061592 + 0 NULL GK000005.2:114530243-114567010 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02360 GTCAGCCTCTTGTCTACCTAATTTGGAGAGAATATGACTTTACTAGCAGAGATACAATAT Gene GeneID:615936|AUTS2:XM_002698110:182_cdna Constitutive 0 NULL GeneID:615936 25 GENE AUTS2 NULL autism susceptibility candidate 2 EMBV3_02869 GTCAAAAGTAGTAGGAGCATGCAGATGGGGGTGGAAAAAGTCGTTTGTACAGCACTGCAG Gene BVT0101_043743 + 1 EMBV3_29556 GK000002.2:15207509-15671108 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104525 1 XLOC_062402 Coding TCONS_00104525 XLOC_062402 NonCoding Coding - 2:15657770-15658918 - TSS77376 1148 1 TCONS_00104525_3 70 1 0 0.00086578215057881 0.000489043062171495 0.00044194349238613 0.000545900210103341 0.000330800983973617 0.000141188736224009 5.2355496426337e-05 0.00222056099774545 0.000460486490368566 0 0.000105661782817208 0 1.24968861265663e-05 0 0 0.000806691458079393 0.000444582330144909 0.000611093311915376 0.000401168706581159 0.000682809395765434 1.58661430511759e-05 0.000991891642472794 0.00012731384694046 0.00023616530295726 0.000649468951850863 0.000518370409441536 0.000188086679215695 3.34675313179246e-05 4.06173028541198e-05 5.237152919545e-06 XR_230266.1 LOC101905876 PREDICTED: Bos taurus uncharacterized LOC101905876 (LOC101905876), 0.0 2071 100.00 0.999128919860627 0 noncoding GTGGAAGGGTCTGCCAGAACCAGAGGCTAAGCACACAGCAGTGTAAAACAAATTCTTTATTCCAGCTTCCAGAATGCATCCTCTTCAGCCTTTCCTGTTCATTGGACTAAAGCTGTTAAGCAATGGTGTCAAGAACCGTCATCCACTGGTTGAAGCTCAGTACAAAACCAGGAAGCAGGCGGGTTTAGATCCAGTAGGAACAACTTGACTCAGATCTTCGCACTTTCACTAAGGAGGGTCGGGGGTGAGGAGACAACATTTACATTTGTACTGAAGCTGATCTGATGTGATTGTGACAGTTTTCCAGTCAGTATTTGTTTATCTTAATTTAGTCGCGTGTTAAAAATGTGAGGGTCAAATTTACTTCCTTTCAAGGCCACTTGGCGTACACGTCTTGTAGTCTTTGGAAGGGATGGCAAGGAAACAGCCATGCTTTAATGATGGGATTAGATGTTGATGAAAGCTAGGTGTAATAGTAGAAACATTTTATTGTATATTTTTATTCCAAAGTAAGTGCAGTGTTATTATATTTAGATAAATGTTCAGTGATAAGCCAGAAATCTTACACATACATTGCTGAAGACATTTTCCCTCTGGATTTAATAAAATTCTGGTACACAGAGGTACAAAATGTAATTCATAAATGTAATGAAAACCCTAGAAAACGCTTCCCGCATGCTTTCCTTCCCTCCCCTCCCCTCCTGTCCCTTTCCTCCTCTTCTCCAGCCCACTCTCCAGTCTTGCTTGCCTTCATTGCTGGGGGAAAAAAAAAAAGAGCAGGTGAGCACATAATTAGGTTGTCACTTTTAAACTCTGGATTAGTGGGACATCCTGGAAGACCTCCCTCAACTGCAGTGCTGAACAAACGACTTTTTCCACCCCCATCTGCATGCTCCTACTACTTTTGACTAGATGTCTTGAGAATCTGCCAATATTTTTAATTGATCAAGTGAAAAATACACAGGAAGTATGCCTGTTTTTTAATTTGTTTGTATATTTTCTTGATGCGTTGCATAAAGACCCAAAGGTGCTTTGGCTTCTGTCTGTCCTCACTGGAACTGTGGTTACTGTGGGGTGTGTGGTACTCCGTAGCACACCATAAATCTCCACTAGATGTCAGCGTGTCACCAAATGAAACCAGCACTCTC TCONS_00104524 s 5' 0 TCONS_00104524 s 5' 0 EMBV3_16662 CTTGGAATCAAATACTCAAATACCTGGATCAAGACTGCCACCAGGAGCTGAAAAGATCGC Gene GeneID:515744|FASTKD1:NM_001102031:4_cdna Constitutive 0 NULL GeneID:515744 2 GENE FASTKD1 MGC165818 FAST kinase domains 1 EMBV3_17507 ATGGCTGCCACTTCCAAAGCCCATGCACTCTGTTACCAGGGGAAATGCCTTACCTATGAT Gene BVT0102_055377 - 1 EMBV3_01093 GK000003.2:30786647-30810107 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_13679 CTATTAGCATAAAGGCACTTTGGAGGTCAGAACAGGCTATTTAAATACTACTTTAACTTC Gene GeneID:509093|TBC1D12:XM_002698390:283_cdna Constitutive 2 NULL GeneID:509093 26 GENE TBC1D12 NULL TBC1 domain family, member 12 EMBV3_20592 AGGATAAACCTTTGGCTGCGTCTGCCTTTCTGCCTACCTTACCCATTGGTCTTGCCCATT Gene GeneID:515340|ABO:NM_001077926:97_cdna Constitutive 0 NULL GeneID:515340 11 GENE ABO NULL ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) EMBV3_20330 CTGTTGTAGGTTGACGTCCTACAGTCGTGAGGCTCATCCTAAGGGCTATTTAGAAGCAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22042 TTCTTCCTTCCATAGTCCAGTGATTTTTCTTTTTGTAGTGATTAATATTTGAAGCAAGCC Gene GeneID:533661|TMEM173:NM_001046357:8_cdna Constitutive 2 NULL GeneID:533661 7 GENE TMEM173 MGC137640 transmembrane protein 173 EMBV3_09205 GGGAAGCTGCAGGCTGTCTCGAATACCTTGGGTATAATTGTGGACAACAGCAAAGACCAC Gene BVV0102_154753 + 0 NULL GK000014.2:29863767-30815410 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41116 ATGGTGCAGGTGCTCACACAAATTACAGCACCAAGTCGATGAGGGAAGACGGAGGCTATG Spike ESK0701 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35329 ACGCTTTCCTGTTCCCAGTCTTGCTCACCTAAGTTGCAGATGGATGAAGGGATTGCTCTC Gene BVT0102_101728 + 0 NULL GK000024.2:60823258-60978528 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140755 TCONS_00140756 TCONS_00140757 1 XLOC_085209 NonCoding TCONS_00140757 XLOC_085209 NonCoding NonCoding - 24:60882402-60911010 - TSS104984 710 1 TCONS_00140757_1 57 0.305633802816901 4 0.975320725696508 5.74832189494522e-05 0 0 0.000198832279817471 0.000226809957525285 0.000715409736753076 4.10680280082845e-05 0 0.00093347794451678 0 0 0 0 0 0 0 0 0 9.62398683446847e-08 0.000344375515826065 0 0 0 0 2.60140543057545e-17 0.000345546055659092 1.30235778682721e-15 0 6.83525540442979e-06 0 XM_005216690.1 RASSF5 PREDICTED: Bos taurus Ras association (RalGDS/AF-6) domain family member 5 (RASSF5), transcript variant X1, mRNA. 3e-12 77.0 79.00 0.135211267605634 0 noncoding 0 0 0 0 -0.128556043499233 0.411780822856512 0.0187397959875481 0.703187221221983 CGGCTTTGCTGGAGCAGCTGTGAAGAGATACCCCACGCCCAAGGTTATTACAAGATAATGGGCGAGATACTTTTGATTCTGAGACATGAATTCTCTTGCTTCTATAAGGTGGATTCTTAACCGCTGGACCAAGAAGGAACCCCTCTTCTGAGTGCTTTCTAAGCTACACAGTACTCATCCAGGAGCGGAGGAAGTGACAATTGCATAAATACGTATAACAAGATTGATCCAGATGGTCAGCACAGAGAAAATGGAACCGTCTCAGCTGGGGCACTGGAGAGTTTGATCTTTGTGCGGCACGCGGCGTCTAGCTCCCCGACTAGGGATTGATTCTGGGCCCCCTCACTGGGAGCTCTGGACTAAATCACTGGACCACGAGGGAAGTCCCATCTTCTTCAAGACCCCCAGCCTCTGTGCGGGGTCTCTCAGTGGCCCCCACTTCCGGCCTGGAGTGGAAGGAAGACCTCCCTCTGCCACTTGGTAAACTTTCTCTGATTTACGCTTTCCTGTTCCCAGTCTTGCTCACCTAAGTTGCAGATGGATGAAGGGATTGCTCTCTGGTTGTTCTCAGCCCGGGGCTGCCCACAATATATGTCAACAAGGAAAGTCCCGTTAAACATCTGTTCACAAGTACATAGGCCGCAGCACCGGGATAGACCAGGGCAGAAACTTCACTGTCTGGGATCAGAGAGTTCTTCAAAGGCCCGCAT TCONS_00140753 s 5' 59146 TCONS_00140753 s 5' 59597 EMBV3_07651 AGAGTCTCACTTTTGGCTTCAACATTACCGCACAGGCTTGCTGGCTGCTGCTCCAACACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27526 ACCAGAGGGTTCCATGGTGGACACGAGAGGAGCAGGGCCTGTGTATAAATACCTTCTAAT Gene GeneID:787569|LARP6:NM_001099205:290_cdna Constitutive 0 NULL GeneID:787569 10 GENE LARP6 MGC166388 La ribonucleoprotein domain family, member 6 EMBV3_22950 CACGTGTCAAGAGTTTACCTCTCAGTGTTCTGAAAAATGGACTTCCTGCCTGTTTGGACT Gene GeneID:522311|ITK:NM_001105388:11_cdna UTR3_Alt 2 NULL GeneID:522311 7 GENE ITK MGC165932 IL2-inducible T-cell kinase EMBV3_05734 GGTGTGCCTATATTTGTTCAGAGGCTCTTGGATGGCAGCTCTGACAGAACAATTGGTGCT Gene GeneID:786695|LOC786695:XM_002707784:15_cdna Constitutive 0 NULL GeneID:786695 23 GENE LOC786695 NULL similar to major histocompatibility complex, class II, DR beta 3 EMBV3_28762 CATCAATGAACTGGTGGTTCTCATCATCGTTGGCTTTGATGTTGGTGTGCCTGGCCTCAC Gene GeneID:100301231|LOC100301231:XM_002699146:3_cdna Constitutive 0 NULL GeneID:100301231 29 GENE LOC100301231 NULL similar to olfactory receptor 160 EMBV3_15816 GTTCGCCCATCCTTGAACACTTTAAGGTTCTGTCCATGCACCTGTTCTCTGGTACCCTCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11863 GCAGGGATGGATGTGGAGTTGACAGTTGAAGCTGAATTTGCCACAGGGAATGACAGGAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_06248 GCTTCTATGAGGTGGACTACAACACCTTCCACGACACCTATGAAACCAACACGCCCAGCT Gene GeneID:539844|KCNJ5:XM_002699224:28_cdna Constitutive 0 NULL GeneID:539844 29 GENE KCNJ5 NULL potassium inwardly-rectifying channel, subfamily J, member 5 EMBV3_19526 ACGTTGGGGGCACGTTCAGCCTTTCTCTGTGTGAGTCCAAGCTGGTCCATCACTTTTTCT Gene GeneID:504369|LOC504369:XM_002693790:93_cdna Constitutive 0 NULL GeneID:504369 15 GENE LOC504369 NULL similar to Olfactory receptor 5B2 (Olfactory receptor OR11-240) (OST073) EMBV3_33740 GACTCTTCTCACCCATCACGGTGGTAAATGTGTATGTCCTTGGCACCAGCAAGTCAAAGG Gene BVT0102_234499 + 0 NULL GK000022.2:16848460-16857730 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_16017 GCTACTAAGGACCAGCAGGGAGAAATGTCCTCTCCCCAGCAGTGAATACTGTTATGCAAT Gene GeneID:511387|KLHL20:NM_001076835:94_cdna UTR3_Alt 3 NULL GeneID:511387 16 GENE KLHL20 MGC142776 kelch-like 20 (Drosophila) EMBV3_38834 TGCAGCCAACCTGGAACGACCTGGCAGACAAGTACAACAGCCTGGAGGACGCCAAGGTGT Gene GeneID:100336922|LOC100336922:XM_002697618:133_cdna Constitutive 0 NULL GeneID:100336922 23 GENE LOC100336922 NULL plasma cell-specific thioredoxin-related protein-like EMBV3_11885 AAGCAAGATCCCCACCCCGAAGGGGGGCCTGAGTAAAGGCTCCAGCAGGACGTACACGAA Gene GeneID:785182|LOC785182:XM_002694118:454_cdna Constitutive 0 NULL GeneID:785182 16 GENE LOC785182 NULL similar to Uncharacterized protein KIAA0562 EMBV3_37207 GCGGCTCGGCGGTCCGGCCGGCGGTCGCAGACCTTCTTGGAGCAGTCAAAGACCCGATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38802 GCTGGAGGAGACTGGAGAGTGATGAGCGTCTGTGCTTCCATTTCTGTATCTATATAATGG Gene BVT0102_035508 + 0 NULL GK000010.2:8170267-8349641 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12325 CTGCCAGCTCTGTGAGGAATTTTTGGGGGATCCAATTTCTGGAGAGCAACATGTGAAGGG Gene GeneID:786496|ZNF318:XM_002697298:133_cdna UTR3_Alt 2 NULL GeneID:786496 23 GENE ZNF318 NULL zinc finger protein 318 EMBV3_09783 GAGGCTGAGTCATGAACCTCTGGACAACCTTGAATCACCGTATAGTCAGGAATTTGATCC Gene GeneID:526377|GMNN:NM_001025337:110_cdna Constitutive 0 NULL GeneID:526377 23 GENE GMNN MGC133820 geminin, DNA replication inhibitor EMBV3_00850 CATTTTCATGAATGGGTCTCTTAGGATGAGTGTCCTGTCTGATTGTACCTACTCAGAAGG Gene GeneID:506753|LRRC1:XM_002697175:209_cdna Constitutive 0 NULL GeneID:506753 23 GENE LRRC1 NULL leucine rich repeat containing 1 EMBV3_05180 CCCACAACTGTAGGGTATCCATAAAACTGGAGAACAGGTGCAGTACGAACAAGGATATGA Gene BVT0102_081329 + 0 NULL GK000021.2:60489137-60797942 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00125006 1 XLOC_076549 NonCoding TCONS_00125006 XLOC_076549 NonCoding NonCoding - 21:60736648-60736958 - TSS93765 310 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00135247798338632 0 0 0 0 0 0 0 0 0 noncoding 0 0 0 0 0.0332511644139535 0.804521047698792 0.0519767691295546 0.335569904807538 GGACTGTAGTAAAAAAAAAAAAAAAGGAGTTGCTATGGTTTAAATAATTAAATATGCAGCATAATTAATTTGTAAGAAATTAGTTGAATTGGTCCAGCTAGAGAGCTGAACAAGCACAGTAGACGGAATAAGTTGAAATTGTTAGCAAAAGTACTATTTTATGTGACAGACAACAAAGCTTAACCTAAGTAAGAAAAGAAATGAGATCAGGAAGGGAGCTATCAGGAAAGGTGAGAGCAAACCCCACAACTGTAGGGTATCCATAAAACTGGAGAACAGGTGCAGTACGAACAAGGATATGAGAGATGTG TCONS_00121781 . 3' 60985 TCONS_00121781 . 3' 61294 EMBV3_18816 GGGCGGTTCCTGATCGAGAGGGTGGCCGAGCAAAAATCTCTAGACCATAGGACTCTATTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37045 GCCCCTCAGGAAAAGCACATCTCTTGAAAAGAAATAGGGGCCTGGGATTAGAGCCATTTT Gene GeneID:281206|GOT1:NM_177502:27_cdna Constitutive 0 NULL GeneID:281206 26 GENE GOT1 MGC127676 glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) EMBV3_06769 CCTCTGTCCTCCACAGTTTCCCTTACCTCGGACAAACTACAGATACACAGATATGCGGGG Gene BVT0101_070173 + 0 NULL GK000002.2:90077584-90077969 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00105789 TCONS_00102886 2 XLOC_062639 XLOC_061971 Coding TCONS_00102886 XLOC_061971 Coding Coding NDUFB3 2:90077706-90088466 j TSS76519 645 1 TCONS_00102886_1 130 3 0.940329026861232 0.000360232870481023 1.8542283688422e-320 0.00046578914848944 0.000117126680667032 0.000310555507395743 0.000191043391893502 0 8.2448856322014e-45 1.47988121834102e-168 0.0004048815862741 0.00113597991995929 0.000101990020576788 3.33818892262805e-05 0.00010935853936097 2.16240846236178e-71 0.00220739484032682 0.00135445808831018 2.92356623803053e-212 6.24346435175886e-05 0.00176783353772235 0.000152989362162927 0.000308770935070526 0.00162976775668024 0.0031744022310582 0.000623433408906626 0.000148558627697432 9.38991527152117e-05 0.000448079267355833 0.000228209002898008 0.000408080526904357 XM_005202601.1 NDUFB3 PREDICTED: Bos taurus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa (NDUFB3), transcript variant X1, mRNA. 0.0 1157 100.00 0.992248062015504 NM_001257102.1 NDUFB3 Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa (NDUFB3), transcript variant 2, mRNA. 4e-137 491 86.43 0.648062015503876 TCONS_00102886_1 sp|Q02365|NDUB3_BOVIN NDUB3_BOVIN NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3; 2e-68 205 100.00 0.746153846153846 1 noncoding 0 0 0 0 -0.25714031545066 0.1422596077813 0.0267783171936469 0.698310539626219 CTGTGCAGCGTCTGAAGATTCCGGCCTCCTAGCAAGGACGACGTCGCGTCTTCCCCACCCTCTGTCCTCCACAGTTTCCCTTACCTCGGACAAACTACAGATACACAGATATGCGGGGGAAATGTCCACTTCAGGCCTGCTTCATGTCACCTCCACTGGTCCAGGAATCAGTGACCCAGGGCAAGAATGTTTAATTTATCCTCTGGTTTCCTGCCACATGGCCCACGGACATGGACATGAACATGGTCCTAGTAAAATGGAACTTCCAGATTATAAACAATGGAAGATAGAAGGGACACCATTAGAAACTGTCCAAGAGAAACTGGCCGCACGAGGACTAAGGGATCCATGGGGCCGCAATGAAGCTTGGAGATACATGGGTGGCTTTGCAAATAATGTTTCCTTTGTTGGAGCATTATTAAAAGGATTCAAGTGGGGATTTGCTGCATTTGTGGTAGCTATAGGGGCTGAATATTACCTGGAGTCCCAGAAAAAAGATAAGAAACATCACTGAAGATAATACCTGGAAATATCTTTTAATGTCTTAACTTTCTTATAAAAAGATTTCTTCACTGTAGCCTACTCACCTGTGTGTTTATTCCTTAAGGAATACTAGTAAGATTTAATAAAATAAGAAAACATGTA EMBV3_25824 CAGAAAGGATATCACTGGGCAAGGGACTGCAGGTCAAGACTCCACAGAAATGGAGCCCTT Gene GeneID:784433|LOC784433:XR_084700:222_cdna Constitutive 0 NULL GeneID:784433 6 PSEUDO LOC784433 NULL similar to Pro-Pol EMBV3_03682 AGCCAAATATCAGGGTGGCAGAAAAGGGAAAAGAAACTCTGAATCCGACCAGTGTAGGTG Gene GeneID:613960|GKAP1:NM_001040573:58_cdna Constitutive 1 NULL GeneID:613960 8 GENE GKAP1 MGC134141 G kinase anchoring protein 1 EMBV3_00450 ATGCCACAGAAATACTGAAAGAAAGCAAAGGAAACGGGGGCAGCCGGACCCCAGCACTAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_26070 AACAGGATGTGATGAAGGTGCTGAGGAACCTGCTGATGGCCCTGTTCATCAAGTACTGGA Gene GeneID:529934|LOC529934:XM_002683850:3_cdna Constitutive 0 NULL GeneID:529934 X GENE LOC529934 NULL similar to Uncharacterized protein C18orf58 EMBV3_40554 AGAGATACCTGCACCCCTATGTTCACAGCAGCACTATTCATAATAACAAGCCATGGAAGC Gene BVV0102_109727 + 0 NULL GK000030.2:124337613-124900716 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_42796 GTGTGTGATGTGCCTTTGGATCAGCTGCCACAATCCGAGAGCTTAAAGGATGTTCTGGAG Gene GeneID:785763|LOC785763:XM_002690976:239_cdna Constitutive 0 NULL GeneID:785763 10 GENE LOC785763 NULL similar to 2,3-bisphosphoglycerate mutase EMBV3_16915 CCCACACTGCGGTTAATTTATCTGTTGTTAAAAACGCGGTTGCTCTGCTTCCAGCCTCTG Gene GeneID:504364|NCKAP5L:XM_002687281:167_cdna Constitutive 0 NULL GeneID:504364 5 GENE NCKAP5L NULL NCK-associated protein 5-like EMBV3_14383 GAGGGTGTGGAGAAAAGGGAACCCTCTTGCAGTGTTGGGAATGTAAATTGATACAACCAC Gene BVV0102_265879 + 1 EMBV3_35146 GK000024.2:36376333-37250983 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00140154 TCONS_00140156 TCONS_00140153 TCONS_00140157 TCONS_00140155 TCONS_00140152 1 XLOC_085073 Coding TCONS_00140152 XLOC_085073 Coding Coding METTL4 24:37248334-37264610 j TSS104679 3941 2 TCONS_00140152_2 74 0.674701852321746 5 0.75815668202765 1.37066190899166e-09 9.94389980514285e-05 1.43944777981113e-13 1.22505207029743e-89 3.29793761799148e-05 5.79117832076969e-06 1.37868072939514e-18 2.70147263255101e-05 1.01098756330684e-66 5.92613284057269e-08 0.000145318399035115 2.14989054627551e-05 4.02196875111787e-23 0 9.80719488674316e-06 0.000887648593697832 0.00309481183112425 0.000712365737616543 2.91306730662455e-05 8.98701509665084e-05 2.85009068754311e-05 0.000495174574746883 0.000616485996947731 0.00106942251093791 4.91927513445201e-202 2.40772019118683e-40 2.42310430790971e-122 0.000294081938952407 0.000200046278409617 0.000460502042816715 XM_005224176.1 METTL4 PREDICTED: Bos taurus methyltransferase like 4 (METTL4), transcript 0.0 2866 99.69 0.407003298655164 NM_022840.3 METTL4 Homo sapiens methyltransferase like 4 (METTL4), mRNA. 0.0 1101 79.06 0.328343060137021 0 coding 0 0 0 0 0.0131522323850549 0.934780972721322 0.0141989773192536 0.774241666894802 TGAGCTGCAGCTGTGCTTTGCTGGACTGGCCATGAAGAGATACCCTATGTCCAGGGTCAGAGAAACCCCAGTAAGATGATATAGTTATTTATCACCACTGCAGATAAAGCAGATCCCTGTCCCTAAGCTGGCTGCTCCAAGCTGTCTTGTTGTTACGTGGGTGACAAATAGACAGAAGCACCTGCGTTTTGTCAAGGAAGAGCTTTACCCGTCTTGGTCTGTGGAGGTAGTTGCTGAATGGCACTGGGTAAAAATCACCAGTTCAGGAGAGTTTGTGTTCCCATTAGATTCTCCACACAAAAAGCCTTATGAAGGTCTTATATTGGGAAGAGTTCGAGAAAAAGCTGCTTTACTATTAAGTAGGAATGCAGATGTAAAAGAGCTGCCCATTCCAGACCACAAGTTAATTGTCAGTGTGCCCTGTACGCTCCATTCACATAAGCCACCTCTTGCTGAGGTTCTAAAAGACTATATCAAGCCAGAGGGAGAATGTTTGGAATTGTTTGCTCGAAATTTACAGCCGGGTTGGACTAGTTGGGGCAATGAAGTTCTCAAATTTCAACACATGGATTATTTTGTTGCTCTGAAGTCTAAAAGCTGACTAGGCTCCTAAAATTGTGTTTTTCTTCAGTTTTTCCTCACTCCTTCTCCTTTCATTCTGATTTATATTTTCCTTTTTTTACCAACCAGTATGCTTAGAGATGTAAACAGAACTTTGCTTTTCAGCAAAGTGACTAGAAGTGACTGACCATCATATAATTTCAAGATGAATTTTACTTCAGGTGCACTAGTATTCCACATTATCCTGGACTCTCTACAAATGAAAGAAGTAAGCCGTTTGAAAGAAGGTAAGACTTTGTTATTGAAAAAGTTCAGAAAGCATGCGTTATGGACCTGAAGTCATAATTCTGCATATGGATGCGTTTTGTTTAGCCCACATGGTGGTGTAAAAAAAATTTTGAACCATCAGAGAATTTCAAGAAATCAGGAAATTTCACATACTAAGTCTTTAATTATCAGCAACTCTGGCTATACAATAGTCTGTACTTTTTCCTGACATCAGTCTGTGGGACCCAGTGATGCCAACTCATTTGGGAAGGGCCATGTACTCTCCAGCTTACTTCAGTAACCTTGCCCCATGCCAATCAGTTATATGTTCTACTTGACTCCTGTACAACCTGAATTTAGAACTTCTTGTTTAGTGTTACATTCTGGAAAACATTCAAAGACCTGTCAAGTACCACATCATTGTACTGAGTTTATGAGACTTTTTTTGGAGGGTTTTAAATTGCATTCACGGTCACTTTTCAAGTACTTTTTACTTTTGCTTGTTCCTCTAGAAGGAAAAAAAAAATTCTTATAATGTTATAAAGTAAACATTGCTTGAACTTAATTGATATTTATAGACTATTCCATCTGAAAGCAGCAGAATACACATTCTTCTCTAGTGCACTTGGAACACTCTATGGATGGATCACATGCTGGATCTCAAAACAAACCTCAGTAAATTTTAAAAAGTTGAAATCACATCAAACATATTTTCCAACCACAATACTATGAGATTAGAAATCAACTACAGGAAAAAGCTAGGAAAAACTCCAAAAACTGTGACATGCTGATGAAAGAGATGGAATATGACACAAACAGATGGAAAGACATACTTCTTGGATTGGAAGACTCAATATTGTCAAAATTACTATACTACCCAAGGCAATGTACAGATTCAGTGCAATCCCTAACAGATTATCAATAGAATTTTTCACAGAGCTGGAACAAAAATTTTAAAATTTGTATGGAAACGTGAAAAACTCAGGATATCCAAAGCAATTCTGACAAAGAAAAATGGAGTTGGAGAAATCAGGCTCCCTGACTTTAAACTATACTACAAAGCTACAGTAATCAAAGCAGTATTGTACTGGAACAGAAACAGAAATATAGATCAATGGAACAAGATGGAATGCCTAGATATAAACCCATGCACCTGTGGTTAGTTAATCTACAATAAAGGAGGCAAGAATATACAATGGAGAAAAGACAGTCTCTTCAGTAAGTGACACTGGGAACACAGCTATATATTAAAGAAGGAAGTTAGAATATTCTCTAACACTGTACACAAAAGTAAACTCAAAATGGATTAAAGGCCTAAATGTAAGACCAGATACTATAAACTCTTATAGGAAAACATAGGCATAATAGTCTTTGACATAAATTGCAGCAATATTTTTTTGGATCTACCTCATAGACAATGAAAATTTAAAAAAAAATACAGAAATGGGACCCAATTAAGCTTAAAAGCTTTTGCACAGTAAAGGCAACCATAAGCAAAGTGAAAAGACAACTCACAGAATGGAAGAATATTTTAATATTTGTAAATGAAGTGACCAACAAAGATTAATCTCCAAAATAATACAAATAGCTCTTGCAGCTCAATATCAAAAACCCAAAAATAACCCAGTCCAAAAAAAAAAGGGCAGATGTAAATAGGCATTTCTCCAAAAAATACATACAGATGGCCAAAAAACACATGTAAAGATGCTCGGCATTGCTAATTTTTAAAGAAGTGAGGTATCACCTCACTGGTCAGAATGACCATCATCAAAAGTCTACAAACAATAGAAGAGGGTGTGGAGAAAAGGGAACCCTCTTGCAGTGTTGGGAATGTAAATTGATACAACCACTATGGAGAATAGTATGGACATTGCTTAAAAACCAAAATCTACCATGTGATCCAGCAATCCCATTCCTGGGCTCATATCCAGAGAAAACCATAGTTCAAAAAGATACATGCATCCCTGTGTTCACTGTGGCATTATTCACAGCAGTCTAAACATGGAAGCAGCCTAAATGTCCATCGACAGAGGAATGGATAAAGAAGATGTGATATACGTACAGTAGACTGTTAGCCATAAAAAAGAAATAATACCATCTGGGGCAATGTGGATGGACCTAGAGATTATTTTACTAAGTGAAATAAGTCAGAGAAAGACAAATTGCATACAATACCACTTATATGAAGTCTAAAAAGTTGATACAAATGCATTTATTTACAAAACAGAAACAGACTTATAGTCTTTGAAAACAAATATATGGTTAGCAAAGGAGAAAGGCTGGGGGGGGGTAATAAATTAGGAGTTTGGGATTAACAGATACACAAAATAATCAACAAGGACCTACTGTATAGTACAGGGAACTATATTCAGTGTTCTAAAACAACCTATATGGGAAGGGAATCTGAAAAAGAATGGATGTATATATGTGTATAACTGAATCACTGCTGTACCCCTGAAACTAACAACATTGTAAATCAACTATACCCCAATATAAAATTTAAATTAGAAAATTAAAGTAAAAAAACAAAGTAACCGCTGCTTATGATTGTGAAAAAATTTTATATCTTATTTCCAGATTTTCTACAAATATTTTTTTTACAAGTAAAATATTTTTACTGGAATGATTCTTTGAAAAGCATGCTGACTTATGTGTAACCTTTACAATTTTTTTTGATGTATATTTTTTCACAGAGTAACATTCTCCAGTTTTCAGTGTAGAATTCAGTGAGTTTTGAAGATGTATATATAGATGTCTGTCTACAACCATAAACATTATATAGAACATTTCCTTCATCCCCTGAAATTCATGTGTCCATTTGCGGTCAGTCATATCCTCCCACCTTTGCCACTGGCAAATAATGATTTGTTTTGTATCATTAGTTTTGCATTTTTTAGAATTTCATACAGATGAAAACATAGACTATGTAATCTATTGTGTTTGGCCTTTTAGCATTTTGAGAAAAGTGTTTATACTATTTACAGATTTTCTATAAATGTTTATCTACTAAGTAAAACGTTAGATTGAAATGACTGACTGACTGTCAGGATTGCCAATTTGTTTGCTGATTTTGCCAAATAAAAATGCTGTTTTTGAAGTTTGTTCATTCTTTG EMBV3_21474 TGCTTTCTGACTACTTTGTTAGAAGATTTTGTCTGTAGAAAGGGTTTGCATTGCTGTGGC Gene BVV0102_441436 + 0 NULL GK000004.2:95006795-95066961 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_22721 TAAGAAGGGCTCCAAGAAGGCGGTGACCAAGGTGCAGAAGAAGGACGGGAAAAAGCGCAA Gene GeneID:529646|LOC529646:XM_002697504:199_cdna Constitutive 0 NULL GeneID:529646 23 GENE LOC529646 NULL similar to histone cluster 1, H2bd EMBV3_06342 AGAACGGAGCCCACCAAATCAAGCTGGGACAAAGGAGGCGTGAATATGGGAAGTGGGAAA Gene BVV0102_039038 + 0 NULL GK000018.2:14326426-14371116 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28395 CCTGTCTACCCAGTGTTGCTGGCGCAAAGAGGAGAGGGGTTGGTTTTTCACGAAGAAATA Gene GeneID:518023|LEMD2:XM_002697182:229_cdna Constitutive 2 NULL GeneID:518023 23 GENE LEMD2 NULL LEM domain containing 2 EMBV3_07240 TGGGATAGCCTTACTTCTGAGTATATTTCCATTTGCAGCTCTAATTGCCCAAGTGTGGCC Gene BVV0102_015320 + 0 NULL GK000018.2:36529836-36584632 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29773 ACGTGCGAGGTGACGCTTGTCTACCGAGAACTGAAGGCAGACATCAGCAAACTCCACAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_22562 CCCAGTGCAACCGGGTGTTGCGAATGCTTAGATGGCAAGACCATGGACTATGCTGAGGTA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37012 GTCTCTCCGTACGTCTGTTTCTGCTCCCTGCCGTAGCTTACGACTCATCAACGCGTAAAA Gene GeneID:783066|LOC783066:XM_002697146:73_cdna Constitutive 0 NULL GeneID:783066 22 GENE LOC783066 NULL hypothetical LOC783066 EMBV3_35910 AGCCAGACCTTGACTTGGTCTTGGACTCCTGGCTTATTCACAAGAACCTCAGGGAACACA Gene BVT0102_283949 + 0 NULL GK000013.2:39632870-39657080 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00042676 TCONS_00042675 TCONS_00042677 1 XLOC_025723 NonCoding TCONS_00042676 XLOC_025723 NonCoding NonCoding - 13:39638942-39648316 - TSS31716 426 4 0.954977061773178 1.49924279348386e-10 3.61458629660538e-10 0 0 3.92599038313972e-05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00163748666339623 7.55797936339816e-11 0 0 0 0.000315574372265974 0 0 0 0 0 0 noncoding AGGAGTGGCGCTGCCTGCAGCCAGACCTTAACTTGGTCTTGGACTCCTGGCTTATTCACAAGAACCTCAGGGAACACACTGCGCTCCCAGATGACATGGAAGAAGAACAAAATGTTTGAAGACTGAAAAAAGAGAGCCCTGCCAAGAAAACTCACTCATTTGTTATCAATCAGGCAAATCAACTCATTGGAGGCGTCAGTGCTTCGCATGCCCTGGATGACCAGGAAGGAATTCTGGCCCTGTGGTATTTTAACCCAGGCGTGCTGGCTGCGTGGAAGGCGTCACAGTTTCCCCGCGTGAATCTGGGACAAGACAGCCTTTCAGGGTGAGGGCTGAGCAGATCTACCCTTCTGCCTCCATCCTGTGTCCCTCAGCAACCCCACTGGATGATGGCCTCACTGCCCATTTGGAGATGGCTCCTCAAGC TCONS_00042672 TCONS_00042673 TCONS_00042674 s 3' 6074 TCONS_00042672 TCONS_00042673 TCONS_00042674 s 3' 6074 EMBV3_11552 TGAAAGTCACCCAGAAGCAGACTGGGACTTCCTGTGGTCCAGTAGTTAGGACTCTGCACT Gene GeneID:510373|BID:NM_001075446:37_cdna Constitutive 0 NULL GeneID:510373 5 GENE BID MGC140420 BH3 interacting domain death agonist EMBV3_22682 CCCTTCACCAAGCCCTTGTTTATGTCTGATTGAAGTTTTGCGTCCCATGTGTGACTGCCC Gene GeneID:505283|ABHD6:NM_001075196:82_cdna Constitutive 1 NULL GeneID:505283 22 GENE ABHD6 MGC139241 abhydrolase domain containing 6 EMBV3_34139 AAATAGAGATGTGTTTTCCGTCCCACGTTCCCAGAAGGGGAGGCTTCAAGGAATTACTGG Gene BVV0102_257701 + 0 NULL GK000022.2:59059138-59089633 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12306 CATTAGCAAAGCCTGCCATGATTTTCTTGCATATATGTGTGATATATGAATCCTGATATC Gene GeneID:511858|NT5C3:NM_001037597:45_cdna Constitutive 0 NULL GeneID:511858 4 GENE NT5C3 MGC133762 5'-nucleotidase, cytosolic III EMBV3_06803 GTCCTATACCCTGAGTGCTGTGGACGCTGCCACTGAGACGACACAGGATCCTCTGAACCT Gene GeneID:518967|C1H21ORF2:NM_001075781:38_cdna UTR3_Alt 5 NULL GeneID:518967 1 GENE C1H21ORF2 MGC139666 chromosome 21 open reading frame 2 ortholog EMBV3_16210 AAAGAGACACTCTCCAAGTGGATCATAGAGGCTGACTGCTCCTGGGTGGGCTTATTTCTG Gene BVT0102_087871 + 0 NULL GK000018.2:45162955-45248795 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00083365 1 XLOC_051240 Coding TCONS_00083365 XLOC_051240 Coding Coding - 18:45210392-45218759 - TSS62664 3584 2 TCONS_00083365_8 144 0.0825892857142857 3 0.571957924934258 0.000265289158159791 0.000980625910895781 0.000294092426002685 5.21325933338164e-05 0.000173573291667919 0.000639342163963617 4.81496014437141e-05 9.08144235788847e-05 0.000272312017383767 0.000117671972231998 6.38725322535981e-07 4.98840448352307e-07 7.01843799387308e-05 0.000172739594818142 2.20395836049425e-05 4.95267810035706e-06 5.14704369465876e-07 0 0.000205774736425314 0.000285218656116797 0.000830058234384546 0 0 0 0.000106968613544992 0.000188764615492411 0.000104096514585494 0 6.77259961611701e-07 0 XR_240300.1 LOC101902865 PREDICTED: Bos taurus uncharacterized LOC101902865 (LOC101902865), 0.0 1088 76.80 0.367466517857143 TCONS_00083365_7 sp|P60509|ERB1_HUMAN ERB1_HUMAN HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 3e-21 89.4 41.28 0.981651376146789 1 noncoding 0 0 0 0 -0.110467177232833 0.440318049743635 -0.0038220719298304 0.940882649776576 CTGAGATGGCCTGGGATGTGGGATATTTAACCCATCTGTGTTTTCATCCGCACCTGATCAAGCCCACGAAGGCAGAACGGACTTTAAGTTAAGGGAGAAACAGTCTTGGATTACATGGTGTTCTGGTTTGGCCATGCTGACTAGCAGGTGAAGACATGCTGATCCCCCTTCTCACTCTGGGATCTGGCAGTGCTCCACCAGGATCAGAGGCTGCCTTAATGCCCGATCCAGGGCAAAGTGAAGTTCCTGCAGCCACCGCTGCTCTTTGCCAGCTCTCCCGGAGATTGTAGAGCCACCGTTTCAGCAGGCTCTGATCCCAGCAATGGAGACCTCTGGTCAACACCCCCAGAATTCCACCTCAGCCGGACCTCCTAGATTGTATCCACCTCTCCGGGACAAAATCTCAGAACTGCATTGCCAGCTCACAGGTCAATGCTGACTCTCAGCACAGATAGGAACCTCCATGGATTCAGCTAAAAGGCACGCTGCCCTTTGAACACCTCGAAGTGGACTTCACTGAAATGAAACCTCACCGACAGTACCATTACCTGCTGGTCATGATATGTATGTTCTCGTGATGGGTAGAAGCTTCTCCTACCTGGACTGAAAAAGCATCAAAAGTAGCCCGGTGCCTGCTTAGGGAGAAGTTCCCAGATTTGGATTTCCTACTAGCATTGGATTGGACAGTGGCCCAGCTTTCATAGCCGATTTAGTATAAAAAGTAAGCAAAACTTTAAACATCAAGTGGAAATTACATACAGCATATAGGCCCCAGAGTTCTGGGATGGTGGAAGGAGCCAACTGGACACTTAAAGAGACACTCTCCAAGTGGATCATAGAGGCTGACTGCTCCTGGGTGGGCTTATTTCTGACGGCTCTGGTCAGACTCAGGATGACCCCACAGTCCCATGGCTGCCCCCTCCCATAATAAAACAGGTGTCAACAAATTTGCCTCAGGTAAGGGGAGATGAGATTTCACAGCAGATGGAATAACTGGGTAAGGTAATAAATCAGGTAACTAAGTTTGCACAAGAAAGGGTGCTGTTCCCCCTTGGGGAAAACATTCACGAATTTGTGCCTGGGGATCAGTTGTGGGTCAAGGACTGGAAACACGACTCATTGGCCCCACATTGGAAGGGTCCATATACTGTTGTTCTAACCACCCCTACAGCAGTTAAAGTTGCAGGTATCACTCCCTGGATCCACCATTTGAGGATGAAGAGAACATACCACGCAGACCCAGAAACTGCTGAGTGGACTGTGAAGAGGGACCCCACTGACCCTTGAGATACTAAGATCATCCTTAAGAAGAAGAAGGAAAAGAAGATCCCAGACAAGGCCCTTCAGGATGAAGCTGCATAATCAACTCCTGCTGCTTGGGTTCATCAACGTGATTTTGAATTTAACTTCCATTTCAACTCAGGACAATGTTTTCATCTCATGGGCACATTCCTTTGTGGACTTCCACACCACCTCCAACTGCTGGGTATGTGGGGCTATGCCTCTGTCTGTGATGGATGGACTTCCTTGGTGGGTGTCACTACTCCGCCAAGGAGATTTTAAACCATTCTGCTCTTTTCTGGAATGACAAAAAGAGACTTTGCTTTCTCTTGTCCATCATAATCTGTCCCTGCTCTCTTGGTGTAAGCCAGATCTACAGTCAATAGACTTGGGTCATGGGGTTACATTTGATGTAAACACCAGTTTCATAGGAGTAACAAAAGCCTATACCTCATATTTAAAGAACAAAAGGAAAAAAGCTCCCTGACCGGAAAGGAAGTTATGTTGAACAATTCTACCAAGTCTGGGATGAATATTTCTGGATGACCCAGAAAAGGGTCAATTAATTACTCCCACCACTATATGCTGGGAACAAAAAGAACAAAGGGTAGGGTTTGGTCACCATCCATTAGACCCCAAAGAACTAAAATATATGGGGTACCTATCCACCAAACAATGTAAATGAACATTTGAGGTCACATACCAGCCCAACCAGTCCATCCATTGGCCAGGATCTGATTGGAAATATAACCCTGGAATCTGCTGGATGGCACCCAATGGAACCCAATGGCTTTGTGGGCCTAACCTTTGGCCTTGGCTACCAATCAGATGGGTAGGCCACTGCACACTGGGATTCACTTTTGCCCATGGCAGCATAAAGCCTAATGTACAACAAGCCCTGGTAAATCTACCTTATTTACATGCTAGTTGGACAAGGTCTGTGTTTCAATGGTATGAGTATGTTGCTGCCTTATTCGTACCTTCTACAGGGACAACAGATATTATGATTAAAGTAGAGGCCTTGACTAATTTCACAAAACAGGCCCTCCTAGATGGTGCTAAAGCCATCCAAGCCTTAGTATTAGTATTGTATTAGTCGCTCAGTCGTGTCTGACTTTTTGTGACCCCATGGACTGTAGCCTGCCAGCTCCTCTGTCCATGGGATTCTCTAGGCAAAAATACTGGAGTGGGTTGCATTTCCAAGCCTTAAATGAAGAACAAATCCAAATGAGAAAAGCGGCAATTCAAAATAGAGTGACTTTGGACATGCTCACAGCTGCTCAAGGAGGGACCTGTGTTATAATTAAGGTTGAATGTTGTGTATATATTCCTGATTTATCTGGCAATGTATCAGCTGTTTTAGATGACATGAAAAACCAGGTAAAAGCAATGTCAAGTGAAAACATTCCTTTCTGGACTGCGGTCCTATCTTGGGTGAAGGGTGATTGGCAGAAAACTATCTTTACCATTGTTACAGTTGCCTTGATAGTTCTGCTTTGTGGACCCTGCATTTTACAATGTATTATGAACTTTGTAACCCAAAGGTTGGTGTCGTTCTCCTAAATTGGTGGTCGGAGAGCCAGGGTGCAATATATCCCTAGGAGTGATGCTCATACTATGAGTTAAGAGCATCAAGAGAGAGGAATGAAGGTGGAAACAGACAGAACAGGCTCCATCTTGAAAGCAAGACTTCATCTTGGGCCAGACTGTGGACACTGAGCTATATGCCCAGTATCTATGGAAATGACATACCAACTTGAAAACCAGACTCCCCCCCACCCCCCACCCCCCAACACACACACATGGAAGAGCCCCAGGGCTCATACCTAGACTCTCTGTTGCCTAAAAGAATACCCCAATTATCTGTGTAACCAAATAGAATCATAAATTCTACTATACTTTTGGGGGTATGACTGCAGGCCGTTTGATATAGTCCACTGTTAACTACCTAGGCTTAAGTCATACAAATCATGGGTTTAAGGCATATGAATCACAGTTTAACTTTGATTGTATCTTTCTTTTCCTTTGCTCAGATTAGTTTCAGAGAATTTGGGGAGGTGGGTTTGAGCATGTACACTTAGGGTATATAATGTTTTCGCAAAAACCGGTTGGAGTCCTTGGCTAAGAGGAGACTCTGCCTTGGGCCCGCCTGTATAATAAACTGCACTCCACTATCTGCATTGTCCTTCTGAGTGAGTTTGTTTCCCAGAACACGTGGCTACAACATTTTGTGCATTGGCTGGGAACGCATAGCTACAACACTAACATGTGAGATGAGTGCAATTGTGCGGTAGTTTGAGCAT TCONS_00086283 r 3' 30037 TCONS_00086283 r 3' 38403 EMBV3_42833 GAACACCACGATCTATTTGTTCTCCCCCAGGGACGGCAAGTGAAGGGCTTTGAATACCAG Gene BVT0102_282955 + 0 NULL GK000011.2:88442064-88473576 11 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00025865 1 XLOC_014841 Coding TCONS_00025865 XLOC_014841 Coding Coding MBOAT2 11:88355303-88450932 j TSS18661 1985 1 TCONS_00025865_4 363 13 0.979378424729159 2.80119315180992e-05 6.6061280524406e-68 2.55151519759008e-05 0.000165806114981657 0.000372420399010021 6.71651459956702e-05 0.000188812126021874 0.000650976660614416 2.35617379528081e-05 3.75732199243861e-06 1.23090447859352e-107 3.14440684083372e-268 0.000131993228771373 1.42213036164695e-05 0.00010253910272604 0.000239008327850415 3.19138619263322e-53 0.000198115256185473 0.000102630618685565 2.65921761855258e-47 2.80329859682014e-81 0.000113438000355186 2.19095978531774e-05 0.000451283785420122 7.44809925951517e-05 7.08627820533228e-05 1.22397240982847e-18 5.44225482419775e-05 3.86876017148434e-151 4.15191313394091e-97 XM_001253490.5 MBOAT2 PREDICTED: Bos taurus membrane bound O-acyltransferase domain containing 2 (MBOAT2), mRNA. 0.0 2277 100.00 0.635264483627204 NM_138799.2 MBOAT2 Homo sapiens membrane bound O-acyltransferase domain containing 2 (MBOAT2), mRNA. 0.0 1636 88.75 0.635264483627204 TCONS_00025865_4 sp|Q6ZWT7|MBOA2_HUMAN MBOA2_HUMAN Lysophospholipid acyltransferase 2; 0.0 689 89.94 0.983471074380165 1 coding 0 0 0 0 0.031890316970101 0.777977792692196 0.0411735767154488 0.492187848071541 TTAAATGAGCTAGAGTTTTCACCCTTGCTTCTTTCTCTGTCCTGTGCCCTGCTTCCCCTCTCACCCGCCTCACTCCCAAACTTCTTGGGGGCAGTTTCTTTGAAGGCACATCAGGTCATTTGTGTCAACTTTGTAGTGTGCCAACTCTTTGCCTTGCTAGCAGCCATTTGGTTTCGAACTTACCTACATTCAAGCAAAACTAGCTCTTTTATAAGACATGTCGTTGCTACCCTTTTGGGCCTTTATCTTGCACTTTTTTGCTTTGGATGGTATGCCTTACATTTTCTTGTACAAAGTGGAATTTCCTACTGTATCATGGTCATAATAGGAGTGGAGAACATGCACAAGTACTGTTTCGTGTTTGCTTTGGGATACCTCACAGTATGCCAAATCACTAGAGTCTATATCTTTGATTATGGACAGTATTCTGCTGATTTTTCAGGCCCAATGATGATAATTACCCAGAAGATCACTAGTTTGGCTTATGAAATTCATGATGGGATGTTTCGGAAGGATGAAGAGCTGACACCGTCACAGAGGGGATTAGCGGTCAGGCGCATGCCCAGCCTTCTGGAATATTTAAGTTACAACTGTAACTTCATGGGTATCCTGGCAGGCCCGCTCTGCTCTTACAAAGACTACATCACTTTCATCGAAGGCAGATCGTACCATATGACGCAGTCAGGTGAAGATGGGAAAGAAGAGATACAGTACGAAAGGACAGAGCCATCACCAAATGTTGCAGTTATTCAGAAACTCTTAGTCTGTGGACTTTCCTTACTGTTCCACTTGATCATCTCTAAGATGTTACCTGTGGAGTACAACATTGATGAGCATTTTCAGGCCACAGCTTCATGGCCGACCAAGGTGATCTATCTCTACGTCTCTCTTTTGGCCGCCAGACCCAAGTACTATTTTGCATGGACATTAGCCGACGCCATCAACAATGCGGCAGGCTTTGGATTCAGAGGGTATGACAAAAACGGAGCTGCCCGTTGGGACCTAATTTCCAATCTGAGGATCAAGCAAATAGAGATGTCAACAAGTTTCAAGATGTTTCTCGATAATTGGAATATTCAGACAGCTCTCTGGCTCAAAAGGGTGTGTTATGAACGTGCCTCCTTGAGTCCCACCACCCAGACCTTCTTCCTCTCTGCCATCTGGCACGGGGTGTACCCGGGCTATTACCTGACCTTTCTCACCGGAATGCTGATGACGCTGGTGGCGCGAGCTGTGAGAAATAACTTTAGACATTATTTCATCGAACCTCCCCAGCTGAAATTTTTGTATGATGTTATAACATGGATAGCAACTCAGATAGCAATAAGTTACACAGTTGTGCCATTTGTACTTCTTTCTGTAAAAGCTTCACTCATGTTTTACAGGACAGAGGAATCAAGTGTCTAGCACACACTCGTTCCATCTCCAGTCACCTGTACACAGCTGTCTCCCCAGACCTGCAGGAGCATGATGGAAAGCAATAGGAATGAAAATAAAAATAATTGTGGCGAAACAAGAGAAACCCTCCTCCATAGAGTGTGGAAATGTGTGATTTCATTCCTGCCTTCCTTTAAAGGTTGCATCTTGATGTCTGCGTAGGAGTAGTTGAACATTGTCACCCCAACATGAGGGGCTCCGAGCTCCAGCAGCTGGTATTCAAAGCCCTTCACTTGCCGTCCCTGGGGGAGAACAAATAGATCGTGGTGTTCTGTGCTTTATGTTTTTATGATTCCAAAATATTTTTTTAAAGAAGTGTTATTTTTTGACAGATCCATGAAATAGTTCCTGTTGTCTGGTAAATGAAAACTACCACTGTGTCCGTTACACTGTGACGTGATGTTTCATAACCACACGTTTCTAGTCTGTGTCCCAAGAGCTGCCCTGGTAGCTTATTGCTGGGTTTCAAAGATGTTTTTAACTGAACATCTAAATGTTTTTTTTCTAATTTATGTGTCTTTAAAAATGATTAAACAGTAGTTTAAAAT EMBV3_21958 TAAAGTGGATGAGGCTACTTCTGCCTGAGGGAATGAGGGATGAGGGGATAGGGCAGCAAT Gene GeneID:524771|LOC524771:NM_001098057:34_cdna Constitutive 0 NULL GeneID:524771 1 GENE LOC524771 NULL hypothetical LOC524771 EMBV3_25933 GGCCATCTCCATTTCTCTGCCTATTGGTCACCTGGGGTGCATCTCCCTCTTGAACTAGAA Gene GeneID:768049|MGC140080:NM_001077106:10_cdna Constitutive 0 NULL GeneID:768049 X GENE MGC140080 NULL hypothetical protein MGC140080 EMBV3_34783 AAACCATCTGTCACAAACACGTTCATGGTGTGCGGGGTTCTATATGCCACTCGCACTCTG Gene GeneID:515082|OLFM4:XM_002691817:489_cdna Constitutive 0 NULL GeneID:515082 12 GENE OLFM4 NULL olfactomedin 4 EMBV3_34474 GAAACCGCCAGAAACGATCAACCAAACAATTGCTATACAGGACGGCATGTTGTGCGCTGC Gene GeneID:529047|LOC529047:XM_002692643:141_cdna Constitutive 1 NULL GeneID:529047 14 GENE LOC529047 NULL testicular serine protease-like EMBV3_10033 CAAGACCTACAATCGGCTTTGGACAGAATGAAAAACCCTGTGACCAAACAGTGGCGAGAC Gene GeneID:521867|MACC1:XM_002686686:100_cdna Constitutive 0 NULL GeneID:521867 4 GENE MACC1 NULL metastasis associated in colon cancer 1 EMBV3_38851 CAACCGCTCTCTGACCGAGGGCCTGATCCTGGACACGATGAATGACAGCCTCAGCAAAAT Gene GeneID:513643|FOXM1:XM_002687900:43_cdna Constitutive 0 NULL GeneID:513643 5 GENE FOXM1 NULL forkhead box M1 EMBV3_29853 TGGAAAACAAGCGAGCACCTCTCCCACCCCGTTACAGCAACCAGAACCTGGAAGATCTGA Gene GeneID:523046|FAT2:XM_002689315:6_cdna Constitutive 0 NULL GeneID:523046 7 GENE FAT2 NULL FAT tumor suppressor homolog 2 (Drosophila) EMBV3_43271 CCTCTGAGCAGTGCTGATTCTGGAGGAAAAGTTATCTAGGTACTGGAGACATTTAAAGGC Gene BVV0102_154576 + 1 EMBV3_39675 GK000024.2:54258313-54278631 24 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10371 TGACAAGGATGACTAAAGTCTTGGGAAGAAACGGTTAATCACTCCGGGGTCTTGGGCAGC Gene GeneID:532143|SMTNL2:NM_001046320:135_cdna Constitutive 0 NULL GeneID:532143 19 GENE SMTNL2 MGC137683 smoothelin-like 2 EMBV3_41250 TTAAGTGATAGTCCAAGAGATGAAGGGAAATGAACCATTCATAATATTTTCTGGTGGACT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27882 GGAGTTTCCACAAGACCTGTTTCCACTGCAGTCCCCAAAGCAGGCACGTTCAGCCACCAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_30501 AATGTCTTTGGACTTCATTGGTATCAGATTGCCCTACTGGATCCAGCCATTGGGCAGATG Gene GeneID:614700|MGC148714:XM_002692789:71_cdna UTR3_Alt 2 NULL GeneID:614700 14 GENE MGC148714 NULL similar to Cytochrome c oxidase polypeptide VIc-2 EMBV3_08364 CAGAGGCCCTTGGGCACCTCATTTGCTGACTCCTGCACGACAGTTAAGGAACACTTTCTA Gene BVT0102_214202 + 1 EMBV3_21631 GK000019.2:7899783-7939828 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00098498 1 XLOC_058743 NonCoding TCONS_00098498 XLOC_058743 NonCoding NonCoding - 19:7937362-7937741 - TSS72874 379 1 TCONS_00098498_1 38 1 0 0 0 0 0 0 0 3.07742002973534e-05 0 0 5.42809496805576e-05 0 0 0 0 0 6.9687259853281e-05 0 0 0 0 0 0 0 0 1.82809334030497e-05 0.000316023762367301 0 0 0 0 NM_005082.4 TRIM25 Homo sapiens tripartite motif containing 25 (TRIM25), mRNA. 6e-18 95.1 67.58 0.746701846965699 0 noncoding CTTCCTGAGGGGCTGCCCCACCCACGCAGCCTCAACTAGGCTCCAGCTCTGCTGAAACCTAGCAGGCAGCTGAGTGGGGGGTACCCAGAGGCCCTTGGGCACCTCATTTGCTGACTCCTGCATGACAGTTAAGGAACACTTTCTACACACACTGTAATGTGTGCAAGAACACCCAACACCGCTTTATTGCACTCAAAGCTTCTAAGGCACGTAAGCCAGCCTTGGTCCTGGTATTTCTCATGCCTTTCCAAAGAATGGTGTCTACAACACTGATAATGTCCTAAAGAATCAACGCATAAAAATACAAGCTGAAGAACACAGGCTTAAATACTCCTAATTAAAACCAATGCAGGGTCGGACAGAATAAGGTAAGAAATAA TCONS_00094979 . 3' 1908 TCONS_00094979 . 3' 2286 EMBV3_13836 ACCAGTTCTGGCAGCTCTGAGGAAAAGCAGAATTCTGTGTCCTCTGAGGAAACTGATGAC Variant GeneID:281499|SPP1:NM_174187:141_cdna 158^238 1 EMBV3_19235 GeneID:281499 6 GENE SPP1 NULL secreted phosphoprotein 1 EMBV3_30989 GAAGGGATCGTTAACATCAGAAGAGTTTGCTAAGCTCGTGGGAATGTCTGTCCTTCTGGC Gene GeneID:511223|VPS36:NM_001098939:94_cdna UTR3_Alt 2 NULL GeneID:511223 12 GENE VPS36 MGC157100 vacuolar protein sorting 36 homolog (S. cerevisiae) EMBV3_15988 CCATCCACACTGACCGGGAAAGTCAACCAGCTGGAGCTGATTCTTCGGCAGCTGCAGACA Gene GeneID:535132|SIPA1L2:XM_002698788:149_cdna UTR3_Alt 2 NULL GeneID:535132 28 GENE SIPA1L2 NULL signal-induced proliferation-associated 1 like 2 EMBV3_06250 CAGCAGCTCCTGCACGGACTTGTGCTGCCAGCAGTCTAGCTGCCAGTCCTCCTGCTGCAC Gene GeneID:783564|LOC783564:XM_002685132:92_cdna Constitutive 0 NULL GeneID:783564 1 GENE LOC783564 NULL similar to keratin associated protein EMBV3_06850 GTGCCTTGATGAGTACTCACCTGGTAACTTTTAGATTTCTTTATTTCCAACATTTCTATA Gene BVV0101_024426 - 1 EMBV3_28781 GK000015.2:17532254-17641415 15 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26087 TTGCCCAAAAGAATCCAGGAGGAGATACCGTCACCAAACACCGAAACTCAGGATGAGACG Gene GeneID:618057|IZUMO1:XM_002695199:892_cdna Constitutive 0 NULL GeneID:618057 18 GENE IZUMO1 NULL izumo sperm-egg fusion 1 EMBV3_22419 TCCAGAACTTTTAACTACTGTTTTGTAAGCCTTCAGGGGCAGCGTTGTGGAGTCCTGGGC Gene GeneID:615333|TMEM87A:NM_001083515:187_cdna UTR3_Alt 2 NULL GeneID:615333 10 GENE TMEM87A MGC142736 transmembrane protein 87A EMBV3_27732 GGGAGCAGCACCGTGGATCTGCCCTTCCAGACACCCTTCCAGTCCTCAGGCCTGGACACC Variant GeneID:510465|CRTC1:XM_002688527:110_cdna 244^291 1 EMBV3_10198 GeneID:510465 7 GENE CRTC1 NULL CREB regulated transcription coactivator 1 EMBV3_00307 AGACCAAGGACGGCGTGGTGGAGATCACTGGCTGCCCCCCGGTGTGGACCCCACCCTGGT Variant GeneID:516099|HSPB1:NM_001025569:188_cdna 474^537 1 EMBV3_01843 GeneID:516099 25 GENE HSPB1 NULL heat shock 27kDa protein 1 EMBV3_18735 AACTTGGACAGAGCTGCAGTAACTTTTCACCCCATCATCACACCAGTGCTCCTCTGACTG Gene GeneID:532635|RCOR3:XM_002694293:378_cdna Constitutive 0 NULL GeneID:532635 16 GENE RCOR3 NULL REST corepressor 3 EMBV3_12388 GGCTGCGCATCTTCCACACTCAGGAGACAGGATAGAGATTCCTTCTGCCATCAGATGTCA Variant GeneID:527992|LOC527992:XM_002691425:424_cdna 301^411 1 EMBV3_22931 GeneID:527992 11 GENE LOC527992 NULL similar to CG17657 CG17657-PA EMBV3_04130 TTTCCAGATTCCAGTAACTTCTTGTCCTTGTTCTTTGAGGAGTCACTGCTTCTGCCAACC Gene BVT0101_063625 + 0 NULL GK000009.2:8953829-9066990 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_10005 TCAGCCTGGAATCTCTGTACTGTGTTTGGGATCCTCCTGGGCTATCCTGTCCCCTATACT Gene GeneID:511599|LOC511599:NM_001100341:63_cdna Constitutive 0 NULL GeneID:511599 16 GENE LOC511599 NULL UPF0739 protein C1orf74 homolog EMBV3_21402 TTTTTCCAAGTTCTGGGGAAGAAGCTGAAGCCACCGGAGGAGGCCGGAAAGTAGTGAGAT Gene BVT0102_197971 + 0 NULL GK000028.2:44036944-44077515 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00160826 TCONS_00160825 TCONS_00160824 TCONS_00160827 TCONS_00160828 TCONS_00160823 1 XLOC_097764 Coding TCONS_00160827 XLOC_097764 Coding Coding ERCC6 28:44029033-44086554 j TSS120181 2037 1 TCONS_00160827_6 641 9 0.964742698191933 0.00757468140549396 0.00477641256296692 0.00280538895011638 0.00328756223002041 0.00336183716057239 0.00179834176551975 0.001627323144626 0.00168426190087152 0.00309880667407661 0.00110181836817718 2.07756832982501e-13 4.32570175606821e-38 0.000500374289155206 0.00128246347844096 0.000222266352621625 0.00462676022004242 0.000313626227784225 0.00291195912423126 0.00389069798131908 0.00538102822359227 0.000514073574994621 0.00147599871566688 0.00138433367455327 0.00163342726745928 0.00352822869652347 0.00308076135968588 0.00317201989659566 0.000323032547881653 0.000296422861528039 0.000145604500649864 NM_001191343.1 ERCC6 Bos taurus excision repair cross-complementing rodent repair deficiency, complementation group 6 (ERCC6), mRNA. 0.0 2580 100.00 0.701521845851743 NM_000124.3 ERCC6 Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 6 (ERCC6), mRNA. 0.0 1303 79.45 0.710358370152185 TCONS_00160827_6 sp|Q03468|ERCC6_HUMAN ERCC6_HUMAN DNA excision repair protein ERCC-6; 0.0 602 72.65 0.709828393135725 1 coding 0 0 1 0 -0.150112083795814 0.360413380805356 0.0146657984870065 0.761706150164716 AGACGCACGCGCCGCGCCCGGTCCTAGTCCAAGTTCTACGGCGGCTGACTGCGGCTGCTGCGTGTACGTTTCCGTACGGGTGGCCGCGCGGCCCTGGGATAGTCTGAAGAGGATGCCAAATGAAAGAATCCCGCACTCAAGTCAGACTCAGGAGCCAGACTGTTCACGGAGCCAGGATGTCAGTGGCAGTGAGGAGGGGACAATCAAGCAGGAGAAGGATGGCGACATGGACCTGGGGCAGAGCCTCCCCTCTTGTTCCTCTGCTAATGGACCCTCCACTTCCACCGAAGGGTGTCTCTTGGAACTTCCCAGGAGAGGGCCAGCCCTGCTGCACATCGACAGACATCAGATCCAGGCCGTGGAGCCCGGTGCACAGGCCCTGGAGCTGCAGGGGTTGGGTGTAGATGTCTACGACCAGGATGTGCTGGAGCAAGGGGTGCTTCAGCAGGTGGATAGCGCCATCCATGAGGCCAGCTGTGTGGCCCAGCTCGCCGAGGCGGAGAAGGAGTACCGGTCAGTCCTGGACGACCTCACGTCATGTACGACATCCTTAAGACAGATTGATAAAATTATTGAACAACTTGGCCCTCAAGCTGCCACCAACAAAGACATCAACAGGAAACTAGACTCTGTAAAACGACAGAAGTATAACAAGGAACAACAGCTGAAGAAGATCACGGCAAAACAAAAACGACTCCAGGCCGTCCTCGGAGGAGCAGAGGTGCAAGTGGAACTCGGTCTCGGCGGGCTGGAGGAGGAGGATGCTGAAGCAGAGCCCTCCTGCCTTGGCAGCATGCTCATGCCCGCTCAGGAGACCGCTTGGGAAGAGCTCGTCCGCACTGGTCAGATGACACCTTTTGGTACCAAGATCCCTCAGAAGCAGGAGAAAAAGCCCAGAAAACTAATGCTCAATGAAGCATCAGGCTTTGAAAAGTATTTGGCAGATCAAGCGAAACTGTCCTTTGAAAGAAAGAAGCAAGCTTGTAATAAAAGAGCAGCTAAAAAAGCTTCGGCCTCGGCCACTTCTGAACCGAGCTCAGCACTCAATGAAAACAAACCAGATGAGAGAGGCAAAGCTGTATCGAAAACAGATAAACGCCTGAAAAAACAGATCAAGAAACTCCAGAAGAGGGCTCTTCAGCTCCAGGGGCAGGTCGGATTGCTAAAGGGAAAGAAACCCTGGGATTGTGATGTGAGACCAAACGCACAGGGGGACTCTGAGGATGAAGAGTCTGAGTACTTGCCCACAGAGGAGGAGCTGGAAGAGACGGTGGGTGCTGACCTGCCCGGGGAAGGCTCTGACTGGGAGCAGAGGCTGGTGCTCAATCGCCGGAAACGGCAGAAGAAAGTCACTGTGCAGGAGATCGATGATGACTTTTTTCCAAGTTCTGGGGAAGAAGCTGAAGCCACCGGAGGAGGCCGGAAAGTAGTGAGATGCCGAGACGATGGAGATGAAGATTATTATAAGCAGCGATTAAGGTTCGAGGGGTTGGGTCCGACCATCATTGTCTGTCCGACAACGGTGATGCATCAGTGGGTGAAGGAGTTTCACACGTGGTGGCCTGCATTCAGAGTGGCAGTTCTGCACGAAACCGGGTCCTTTACCCACAAGAAGGAGAAACTAGTTCGAGACATTGCTCGTTGTCACGGGATTTTGATCACTTCTTACTCCTACATTCGACTGATGCAAGATGATATCAGCAGGCATGACTGGCACTATGTGATCTTGGACGAGGGACACAAAATTAGGAATCCAAATGCTGCCGTCACCCTTGCTTGCAAACAGTTCCGCACGCCTCATCGCATCATCCTGTCCGGCTCACCGATGCAGAATAACCTGCGAGAGCTGTGGTCTCTCTTCGACTTCATCTTCCCAGGAAAGCTGGGCACACTGCCTGTGTTTATGGAGCAGTTCTCAGTCCCCATCACCATGGGGGGGTATTCAAACGCCTCCCCGGTACAGATTGTAAAGTCCTTGGGAGCAAGGGTGTTGCTATTATTTGCTCCTTTTTGTTTAAGATCATCAGTTCAGTTCAG EMBV3_24316 CATCAGCATTCCTACAGTTAAGTATGATTCAAGACCAAGAATGGTATAGACTGACTCTGG Gene GeneID:768032|C3H1orf141:NM_001077091:67_cdna Constitutive 1 NULL GeneID:768032 3 GENE C3H1orf141 C1orf141 MGC137116 chromosome 1 open reading frame 141 ortholog EMBV3_29751 TGTCAGCACTGGATCTGAGACTTCCAAAAAATGAAGCTGGAGACAGGACTGTGGGTCTGG Gene BVV0102_142550 + 0 NULL GK000002.2:100307062-101527295 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00106017 TCONS_00106018 TCONS_00103202 2 XLOC_062698 XLOC_062036 Coding TCONS_00103202 XLOC_062036 NonCoding NonCoding - 2:101020990-101021735 - TSS76675 385 1 TCONS_00103202_1 76 2 0.485215053763441 0.00125902797752454 0.000507783822358494 0.000976762065977653 0.001179837695031 0.000934343121854568 4.19729241267414e-19 0.000271984078814856 5.06224209857745e-05 3.86651537817454e-17 0 0 0 3.7291044232848e-14 1.83784838332775e-05 5.25004401047261e-05 1.17932768543076e-11 0 0 0.000123147452015869 6.048075282589e-09 0.00014475420600782 0 0 0 0.000487572635114463 0.000372849488525609 0.000190551464697447 0 0 0 XM_003581865.2 ERBB4 PREDICTED: Bos taurus v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 (ERBB4), partial mRNA. 6e-144 513 100.00 0.735064935064935 XM_005246375.1 ERBB4 PREDICTED: Homo sapiens v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 (ERBB4), transcript variant X1, mRNA. 3e-91 338 87.46 0.709090909090909 0 noncoding 1 1 1 1 0.0269884414701511 0.855648949674819 -0.000953978579571295 0.989794856821749 GGTTCAACCCCTGGAACGCGAGAAGGACCGCGACCCACCTGACTGAGAAGAGCTGGGCTGGACGGTCCCCGCCGCCAGGAGAAGGCTCACCCAGACCCACAGTCCTGTCTCCAGCTTCATTTTTTGGAAGTCTCAGATCCAGTGCTGACAATTACATGTCCAAATGGCATAATCCCCTTTCGGGGCACGCGGAGGAGATCCCTCGGCCGGGCGCGCGTGGGGTCGCGAGGGGCACTGGAGCGCGCGGTGCACCGGCTCCGAGCGCGGGAGACCGAGTCCGCGTCCGCGGGTCTAGGGCCCGGACCCGGAGGACCAGGAGAGGCTTTCTTCACACTTGTCCGGCGGCTGCGGTAATTAAAGCTCCGAGCGTCATTTCCAACGCTCC TCONS_00106013 r 5' 387455 TCONS_00106013 r 5' 387455 EMBV3_43117 GAGACCTCTGTTAAACGAACCTGCACCTCCACCTGTGCCTATAATGGGAAGGACAAAAGG Gene GeneID:514550|ZCWPW1:NM_001076853:176_cdna Constitutive 0 NULL GeneID:514550 25 GENE ZCWPW1 MGC143046 zinc finger, CW type with PWWP domain 1 EMBV3_38517 ATCAAGGGAAGCTGGGCGTCGACCTGCCAGCTCTGCGCCCCCACACCCTGGGATCTGAGT Variant GeneID:407143|HDGFL1:NM_001001136:41_cdna 487^972 1 EMBV3_05561 GeneID:407143 23 GENE HDGFL1 MGC134197 hrp-4 hepatoma derived growth factor-like 1 EMBV3_31144 CCAGGACAGTCATCAGGGGCTCTCAGGCTGACCAATTCCTGCCCTCTGTGCCGCCATGAG Variant GeneID:515743|RNF181:NM_001034510:89_cdna 259^368 1 EMBV3_27442 GeneID:515743 11 GENE RNF181 MGC126933 ring finger protein 181 EMBV3_09437 TGGCTCTCTCCCCTGTCATGGCTGGCCTTAAAGATTTCGGTTGAGGTGACAGCATCATCT Gene BVT0102_077107 + 0 NULL GK000022.2:22578624-22906166 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00128358 TCONS_00128357 TCONS_00128356 1 XLOC_077870 NonCoding TCONS_00128357 XLOC_077870 NonCoding NonCoding - 22:22777945-22780184 - TSS95771 955 1 TCONS_00128357_2 64 0.233507853403141 2 0.574173369079535 0.000405596740133618 0 0.000577176857301075 7.43023473707037e-05 0 3.74560452340127e-06 3.16103720063105e-05 0 5.88737371146218e-33 0 1.6778263098052e-05 0 1.30412918229706e-11 0 0 0 0 0 4.24054593647815e-44 5.44802822163692e-05 3.35861630159846e-05 0 0 0 0.000142580088163573 0.000103253406482056 0.000104700172965268 0 0 0 NM_174181.2 SELE Bos taurus selectin E (SELE), mRNA. 4e-31 140 88.79 0.110994764397906 0 noncoding 1 0 1 1 -0.625993617391872 0.101234097304282 -0.0163029836234744 0.731249646683689 CAACTGTCAGCACTTAAGTGTCAGCCTCAGCTGCAGAGAGTGGTTTTGTCTGAGGTTTTATTTCCAAGGCAGCCTGCAGGGTTTAAGGGCCCAGTCAGTTTGGCCCTGACACACTGATAGGCAGCACTCCTCCAGACCCGCTGGTAAGCAGGCTGGCTGAACGTCTGTCGAGGAGGGTATTGCAACTTCACCTATTTTGCTAAATACTTCCGCCTGCCTCTTTTTTCACTGGCATTGCTCTCCAGTAAATATACATGCTTGTGACCCCATGGACTGTAGCCCGCCAGACTCCTCTGTCTTTGGGATTTCCCAGGCAGGAACATCGGAGTGGGTTGCCATTTCCTCCTCCAGGAGATCTTCCCAACCAACCCAGTAAATATCTTGAGCCCCCAATTCCATCTCAAGCCTGCTTCATGGAGAATCCAGTCTTAGAGATCAGCTTGGATTGAACCACAGGAGGCTTTGTATATGAAGCTAAGGCATACTACCCGCTTGTTGTTATACACGGTCATCTGACTTTCTCTGGCTAATTCAAGCAGAAATGGCACGCGTCTGCATGAGCTGTAGTACTGAAGAGTTAGCACTCCATTCTCCTGGCTCTCTCCCCTGTCATGGCTGGCCTTAAAGATTTCGGTTGAGGTGACAGCATCATCTTCCATCAGCTTGGCTTCCTGAATGACAGCAATCAGCAAACATTCCTATTTATCTGCATTAAAACTGTAGTGTAAGCAAGAAAAAACTCTTTGTTCCTTCAAGACATTGAGATTTTGGTGTTCTTCGCTCCTACATATAACCTTCCCTATATTGACAGATACATAGTATTGACCTAAGAGACTGTTGGGAGGTTTAAATGAGAAGAAGCACATAAAGCATTCACCCTGGTGCCTGACACATGGGAAGCCTCAAAAACAATGTACTGTTTTTATTCTGTCTAAAGGAGAAGATATATCGTAGC TCONS_00126485 TCONS_00126486 TCONS_00126487 TCONS_00126488 TCONS_00126489 TCONS_00126490 TCONS_00126491 TCONS_00126492 TCONS_00126493 TCONS_00126494 TCONS_00126495 TCONS_00126496 r 5' 63803 TCONS_00126485 TCONS_00126486 TCONS_00126487 TCONS_00126488 TCONS_00126489 TCONS_00126490 TCONS_00126491 TCONS_00126492 TCONS_00126493 TCONS_00126494 TCONS_00126495 TCONS_00126496 r 5' 62040 EMBV3_32353 ACACAGAAGTGGGTAAACAGAAGGATGAGGGGCAGGAACCCCCAAAGCAACTTCACATTC Gene BVT0102_398310 + 0 NULL GK000018.2:24002081-24012775 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_43159 GGATGGTCATGGGAAACTGGCCAAAGCCCCAGGCAATTTCAGTCTGATTCTTCCACCTTA Gene BVT0102_067830 + 0 NULL GK000030.2:84902345-84950455 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_28440 TCCACAGACCCTCAGGACCAGGCTTCTCAAGGTGACTGATCAAAACTGCAGAATAAAGTC Gene GeneID:614252|RASL12:NM_001076933:266_cdna UTR3_Alt 2 NULL GeneID:614252 10 GENE RASL12 MGC139757 RAS-like, family 12 EMBV3_00089 CGAAAAAGGAGCAGATGTGCGACAAGTGCCCTGAAACTACTGAACAGAGATGCAGTGTGC Gene GeneID:532978|DHX32:NM_001101144:45_cdna Constitutive 0 NULL GeneID:532978 26 GENE DHX32 NULL DEAH (Asp-Glu-Ala-His) box polypeptide 32 EMBV3_07083 CAGCAATCTGAGTCCAGAACAAGAACAGGGACTGTGGAAACAGAGCCATAAATCCTCTGC Gene GeneID:519943|LOC519943:XM_002692949:41_cdna UTR3_Alt 2 NULL GeneID:519943 15 GENE LOC519943 NULL similar to CG4452 CG4452-PA EMBV3_27009 CAAGGAGTTCGACGACCTGTTCGACACAATGTACAAGGAGAAGATGCTGCGCGCCAAGAT Gene GeneID:526838|TADA2B:XM_002699586:74_cdna Constitutive 0 NULL GeneID:526838 X GENE TADA2B NULL transcriptional adaptor 2B EMBV3_33802 ATCTGAGCACATCTCAGGCTTACTGTATATCTCCTTTTTCTGGCAAATTCCCGCTCATCC Gene BVV0102_114268 + 0 NULL GK000008.2:98427541-98681863 8 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00228730 TCONS_00228731 TCONS_00228728 TCONS_00228729 TCONS_00228733 TCONS_00228727 TCONS_00228732 1 XLOC_138576 NonCoding TCONS_00228728 XLOC_138576 NonCoding NonCoding - 8:98443042-98454645 - TSS170459 1230 2 TCONS_00228728_2 56 0.207317073170732 3 0.894242372004827 5.97935721622424e-190 3.33248641452249e-26 1.10595053207496e-94 1.4440756884862e-46 1.55601836758638e-35 1.16351770447674e-33 0.000231661819450395 6.11490408092303e-180 0.000390187471966213 3.33750599008094e-260 0 0 8.22939733050978e-05 1.07127481060986e-86 0 0 0 0 0.0014736276131213 0.00172264489129491 0.00129310927478227 0 0 0 0.000548072296543845 1.45474727558319e-39 0.000130579197305055 0 0 0 0 noncoding 0 0 0 0 -0.443125866353371 0.0182692479305069 NA NA GGGATGTGGCCATCTTGTTTAACCAGCCTTCTAGGTGCCTGTGAAGCATGGTTAGCTTGAGAACCACGGCCCCCGGCCCAGGAGCTGCTTCCGACATGGGCAGCAAGCTTCGTGGACTCCACAATACTTCAGTTTTCCTCAGTAGACCTGAATGGGACCTGAAGGAACTTCCTTTAAAGCAGTGTTTACAATGAAAAGATATTACTTTTATAATCAGAAAACAAGTCCTAATAAACCTGCTGCTGCCACTCAGAAACATAGCCATAACACTTCCCTGCTCCTTTTCTCGGAAAAAGTATTTCACCAGCACAAAGCATCTTGACTGAATCAACCTACTTTGTTCCAGACACAATGCCAAGCATTGGGGATGCAGCCAGTCGGTGAGGGGGAGAAGCTCGCAGTGAGCAGACATTTGCATTCTGAGTCTTTAGTGCAATGAGCTCAGTGAGTTCTGAAGGCTATGGAGGACCTCACCTGACCTTGAAGACTGGAGAGCACCTCCCAAGGAGATAGCACATTGGCCCAGATCTGAAGGATGAGCGGGAATTTGCCAGAAAAAGGAGATATACAGTAAGCCTGAGATGTGCTCAGATTAAAATTTCAAAAAGTTCCAGCCAGCAGGCTATGGAGTAGAAAATGTTTTGCCCTCAAATGCTGATGCTTATTGGTTCCCTAAAGACTAAGGACCAGACAGCTGAGTGTGCACTCGGTTAGTAAACTGTGAGGAGAGAGAAGCCCTTTCTCTAATTGTGTACACGTTATGAGGATTAAATACAATTATCCATGGCAAGTGTTTAACCCAGTGCCTCTCCTGTAGTCTGTATTCGATTGATACTAACATCATTATCATCATCACTGCTGTTGCTTTCAATTCTTTAATGACCTGGAACCTTTGTTTCCAAGGGCTCTGCATGTGTGCTGTAGAAGCTAGGCAGGATCTTCCAGCATCTTCACCAGGTCCATAAGCCAGAGTCCTGTACTGCTTATGTTTAAACCAGGACAGTGACTATATTTCTGTCTCTGGCCAGACTGAATAACTGATTTTAGGATAATGAATAGAAACCAGACATCTCTTCACATCACTTCCACCAAACCATGATGAGCTATTGTGTGAGTTCTGGGGAAGGTGCTTTTTTTCTGGCTGTGGTGGGAGTGTTGAGGGGGGTGAATGGGTAAAACTTTAAAAGTGCCCTCTGAACACTTGCAGAGAAGCATTTTGCAGAGCAATGA TCONS_00226390 r 5' 3785 TCONS_00226390 r 5' 0 EMBV3_27884 CGGTGCGGGACCGAGAGCTGGACCTGCGGGGGTGATCTGGACCCTCTGGCATCTCTCAAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38701 TCCCACAGGTTGTCGCCCTTGGAAGAGGAACCACTTTTCCCTCACTTCTCTACAAATTTA Gene GeneID:540539|HRASLS:NM_001076225:114_cdna UTR3_Alt 2 NULL GeneID:540539 1 GENE HRASLS NULL HRAS-like suppressor EMBV3_10805 ACCTGGCAGGAATACTGGGGCTCACTTCAGCTCCTCAGGCAATGCTGGATAACCCAGTTA Variant GeneID:514214|CASP1:XM_002692921:39_cdna 310^369 1 EMBV3_17048 GeneID:514214 15 GENE CASP1 NULL caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) EMBV3_25417 CTAGGGGGCAGGTGAGCTCTCTTTGTGACTTGCTCCTAGGTTGGTGCCTCCATCAATAAA Gene GeneID:511885|PLEKHB1:NM_001046103:55_cdna Constitutive 5 NULL GeneID:511885 15 GENE PLEKHB1 MGC128483 pleckstrin homology domain containing, family B (evectins) member 1 EMBV3_27065 GCAATGGTAGCATGGAAATTATCTGAGGTGTCTTGTATGATTGTGCTTTGGCCAGGGTGG Gene GeneID:538366|SNX18:NM_001083731:79_cdna UTR3_Alt 2 NULL GeneID:538366 20 GENE SNX18 MGC155086 SNAG1 sorting nexin 18 EMBV3_07859 ATGGGGAGTACCGATGCTTTTTCAGGCAGGACGAAAACTACGAAGAGGCCATTGTGCATC Gene GeneID:282157|BTN1A1:NM_174508:29_cdna Constitutive 0 NULL GeneID:282157 23 GENE BTN1A1 BTN butyrophilin, subfamily 1, member A1 EMBV3_17568 AGTGATCCTTGTTCTGGTGGCTTTGTGTAAATATGTTTGCCCTAGTTGAATTAAGAAACT Gene GeneID:534759|GPATCH8:XM_002696075:4_cdna Constitutive 3 NULL GeneID:534759 19 GENE GPATCH8 NULL G patch domain containing 8 EMBV3_30916 CTGTTTTCGAACAAACCCTACAACTACAAGCTGCCACCAATGCCAAAAGATTACAGCCCA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_11479 AGAAGCTGGTGGTGGTGTTTGGAGCCACAGGGAAAGCTGCTGGCTGATCTGGCCAAGCGC Variant GeneID:534628|NMRAL1:NM_001076032:231_cdna 121^359 1 EMBV3_25762 GeneID:534628 25 GENE NMRAL1 MGC140806 NmrA-like family domain containing 1 EMBV3_02777 TCGGGACCCCGTGCGCAACCTCCGCCTCCGGTGGACACCGCCCAGAGGAAGAAGAAGAGG Variant GeneID:530761|MKS1:XM_002695578:103_cdna 91^200 1 EMBV3_21962 GeneID:530761 19 GENE MKS1 FLJ20345 Meckel syndrome, type 1 EMBV3_40787 TAAGTTGATGACTAGACCTACAGTTAATTTTCCTGCAGTATATGAAGTATTGTACCAGAG Gene BVV0102_103784 + 0 NULL GK000017.2:63748795-64010591 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077747 1 XLOC_047136 NonCoding TCONS_00077747 XLOC_047136 NonCoding NonCoding LOC100848773 17:63983242-64009007 = TSS58017 2053 4 TCONS_00077747_1 51 3 0.920431609998447 0.00392332156375688 0.00286818357656342 0.00206446392236299 0.00197794253190984 0.00232309266249471 0.00132244692482202 0.00301101116158866 0.00369922474858391 0.00593008585372993 0.000444918312843081 0.000526299191546193 9.23094690639191e-05 0.000582802154663059 0.00131748131170757 0.00180143331172667 0.00618800380449623 0.00392415349909664 0.00557303666174814 0.00160324239330823 0.00186178565518075 0.00107352009946368 0.0048109760988931 0.00240857880003624 0.00392780973002694 0.00346929496247286 0.00369604109042379 0.00338192420858996 0.000636290357641817 0.000321590952344186 0.000828770379158332 XM_003583326.2 PTPN11 PREDICTED: Bos taurus protein tyrosine phosphatase, non-receptor type 11 (PTPN11), mRNA. 0.0 3662 100.00 0.988309790550414 NM_002834.3 PTPN11 Homo sapiens protein tyrosine phosphatase, non-receptor type 11 (PTPN11), transcript variant 1, mRNA. 0.0 2060 82.56 0.994154895275207 0 noncoding 0 0 0 0 0.756031201078363 0.132333418988016 -0.267580753965987 0.00129831666402693 GTCTTCTTGTCAAACCTGTAAGGAAAGAGATTCCAGTTAAGTATTTGCAACAAGGATCTTGCGTCCTGTTATTTTTTCTTACATTGTCACATTGAACGGGTCTCATTTTTGCAGTAAATTTTTGACTGTGGACTTTGGGGGCAAGGTCTTTCACCAGCAAACAAGGGTTTGATTGTACAGTATATCTGCTGCAGTAACGTTTCTGCCTGTAGCTTAAGATCAGTTGGTTTTGCACTTGGAAACCACCTGATCTTGGCCAGCTTTGTAAAGGGACATTGATTTCATTTAGATTTCCCTCCATAAAGTCAGCAAACTATCATGTGCTATAAACTGATGCCAAGACAAGGTTGTAATAGTCCCTAGGGTGCTAAGGTTTGCCATGTGTTTGGTAAAGGTGATTGTAGGTTCTTGGGTAACGTTACATGGGATGGATTCAGGTGGAGGGACTGTGAAGATGGGTGGGGGCGGGGGGCGGGGGCTCAAGGTGCAGGTAGAAATACAGTGGAAATGGAAGTTCCAAAGAGGTGGTTTCTGAGGAAGTCAGAGGGCCTGGGGCCAGAGCAGTCAGTAAGAGTTGAATCAGGTTACCTGGGAAATAGGTGTGATAGCTACACGTCTACAGTCTGCTTCCGGGTTGCTGGTAGACATTAAATTTGCACAATATCCCGTAGCTGGCTAAGTATTTTAAAATTATAAGCATAGGATTTTATATTTGGGGTGAAGAAATTACCTGGCACGTGGTATTGGGGTTTTTTTAAAAAGAAGCCAAATTTCAGAGTCTTAATAAAACTTTTTTAAAAAGGAAAAAAAAAAGCAAAAAGACACCTTGTATTCAGTGTGTGGCCCTCCTGAGAATTCTGGTCATCTCTCCCTTTGAAATCAGTGACTCAGTGACTTTTTAAATGTGGCTGAACAGGGATGAGCAAGTACATGTGTGATTTTCTTGGTGTTTGTGCATCCTTTACAAAGCCCAGTTGCTTTGAAACACCCAAGAAAGTCATCAAGATTATTTTTAGGTGTTATTAAGGGGTTATTAAGGGTTTACTGGGGTTTTTAAGAACTAATACAATGTCCTGGGTTCTTTCTAGTGCAGCGGAATGTGGACAAAGGTATGCAGTTGTGAAGTGCTTTGTTGTAGCTTATTAATCCACAAGGGAAACTTAGGCTGTAGACATAAGTACAGACCCAGTGCAGTTCTTGTTTTCTGTATGTTGTTGGGGGAATAAAGTTTTATATGGCAAGCACATGGCCTCCCTGATTTCAATATGCCTTTATTAGGATCTGTATTAGCCCTTTATTTCTTTAAAATCTTTTTTCCTCTTCCTCTTGAAAAGTAAGTTCCAAAATATAGTTTATTGTATCTTCCATCCTTAAAAAGTTTGTTCCTTTTTCATTACGGGCAGTTCACACAAGGCAAAAATATTAAACAGTTGGTTTTAGTGTGTTGTATAACTTTACTGTATATCAAACTAATTTTTACAAGTTTTCATCCTAAACCTCAAATCATGTAATTAATAATTTGCCTGTTTATTTATGACCTAATTGTGATTCTTTTATTAATAAAAGCTAATGGAAAAGGATCCTTTATTAAGTTGATGACTAGACCTACAGTTAATTTTCCTGCAGTATATGAAGTATTGTACCAGAGTATTAAAAGATATGTAATATTTTATTGATAAATCTATCCTTTAAAAGGAATACGTTTTAGGATGTCATCATTTTGATGTGAATCATGTAAATGTTGATAATATGCACTGTTTATTATACATTTAGTGTTTCAAGAGATTCAGTTAATTGCCTTTTTGCCCACGTATATTATGTAGTCTACTTGCAATTGTTTTTAAAAAATGACATTAAAAGAATAGTTTATGTAGAGGAACGTTAGTGGTTGTTAATTGTCTCCCCACCTGTATTTATGGGTGTTAGTTTTAACTGCTTTGCTAGTCGCAGAGCTGCATTATCAGAGTAAAAGTGTATTTGTAAACTGTATGGGAACTAAAAATTAGGAATAAAACCATTTTCTTATATTACAGGGAAAAAAATGGGCCGCCTC EMBV3_03373 AGCCCCATCACGGTGGAGTGGCGTAAGGGCACTTGGTTTCCTTTCACTGTGGACCCCACA Gene GeneID:790858|LOC790858:XM_002697314:11_cdna Constitutive 0 NULL GeneID:790858 23 GENE LOC790858 LA-DQB hypothetical protein LOC790858 EMBV3_04236 CAGGAACTGAACAATGGCCCAGCCTTGCACACCATATTCCTCATAGAGCCGCTTACGTAG Gene BVT0102_278058 - 1 EMBV3_30841 GK000007.2:51411766-51421164 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00213412 TCONS_00213414 TCONS_00213409 TCONS_00213410 TCONS_00213413 TCONS_00213411 1 XLOC_130448 Coding TCONS_00213409 XLOC_130448 Coding Coding LOC100848816 7:51359809-51419436 j TSS159873 6471 1 TCONS_00213409_10 1599 24 0.89187602723644 0.000461894452640948 0.000700825756112483 0.000750097356855773 0.000201671081917532 0.000504338525471763 7.60726129042711e-05 6.00484800654301e-05 0.00012619744627987 0.000827465817796847 0.000256524093054723 1.34428107665344e-05 8.44382201209727e-06 3.7441921617896e-06 0.00038353509976164 4.91873061339667e-06 0.00928952230354128 0.000685362183681507 0.00315337087087513 0.000160621804452684 0.000520477013190821 4.85948857462826e-05 0.00179235395597851 0.00167646453768387 0.00236993067990848 0.000524814274424724 0.000442094121210073 0.000288237702202486 0.000795073756839295 0.000739149417285338 0.000735014776630893 XM_003582422.2 KDM3B PREDICTED: Bos taurus lysine (K)-specific demethylase 3B (KDM3B), 0.0 1.161e+04 100.00 0.995054860145263 NM_016604.3 KDM3B Homo sapiens lysine (K)-specific demethylase 3B (KDM3B), mRNA. 0.0 9355 92.21 0.994745788904342 TCONS_00213409_10 sp|Q7LBC6|KDM3B_HUMAN KDM3B_HUMAN Lysine-specific demethylase 3B; 0.0 3148 96.51 0.999374609130707 0 coding 0 0 0 0 -0.0419130026303577 0.785037199213295 0.00662784414745146 0.903062477140028 GGAGTTGTCACCTATCCTGGAAACAAAATCTTTGTAGAATTTGATGGCTGTAACTGGAAGCAGCACTCCTGGGTTAAAGTTCACGCTGAAGAAGTTATTGTACTTTTGCTGGAAGGGTCTCTAGTATGGGCACCTCGGAAGGACCCAGTCCTCATCCAGGGCACTCGAGTCTCAATTGCACAGTGGCCAGCCCTGACTTTCACTCCCCTGGTAGATAAACTCGGTTTGGGTTCTGTGGTTCCAGTTGAATACCTTCTGGATCGAGAGCTTCGTTTCCTGTCAGATGCTAATGGGTTGCATTTGTTCCAGATGGGAACAGATGGCCAAAACCAGATTCTTTTGGAACATGCTGCTCTGAGAGACACAGTTAATGCTTTGATCAGTGACCAAAAGCTACAAGAGATATTCAGCCGAGGTCCCTACAGTGTTCAAGGTCACAGGGTCAAAGTGTACCAGCCAGAGGGAGAAGAAAGTTGGCTCTGTGGTGTTGTAAGCCATCAAGATTCCATCACCCGTCTTATGGAAGTGTCTGTAACTGAGAGTGGTGAGATCAAGTCCGTAGATCCCAGACTGATCCATGTGATGCTCGTGGATAATTCGGCGCCTCAGAGCGAGGGGGGTACGTTAAAAGCAGTAAAATCTTCCAAAGGAAAGAAGAAGAGAGAGAGCATAGAGGGGAAAGATGGCCGGAGGAGGAAAAGTGCTTCGGACTCTGGGTGTGACCCTGCATCAAAGAAATTGAAAGGAGACAGGGGTGAAGTAGACAGTAATGGGAGCGATGGAGGCGAGGCAAGCCGAGGGCCCTGGAAAGGAGGGAATGCCAGTGGAGAGCCAGGGCTGGATCAGAGAACCAAGCAGCCACCGACTACATTTGTCCCCCAGATTAACCGCAGCATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGGACTCTGGTGGTGCAGGATGAGCCTGTGGGTGGGGACACACCTCTACCTTTCACTCCGTATTCTGCAGCCACAGGTCAGACACCTTTGGCCCCAGAGGTGGGTGGAGCCGAAAATAAAGAGGCAGGAAAAACACTGGAACAAGTTGGCCAGTGTATGGTGGCTTCAGCAGCTGTGGTCACTACCGCCAGCTCCACCCCAACCACGGTGAGGATCTCAGACACTGGCCTTGCAACAGGGACTGGGCCGGAAAAACAGAAAGGCAGCTGGTCGCAGGCCCCAGGAGAGAATTCAAGGAATTCTGTCCTGGCCTCTTCTGGATTTGGAGCATCACTCCCGGGTTCATCACAAGCTTTGACTTTTGGAAGTGGAAGGAGCCAGTCCAATGGGGTTCTTGCCACAGAGAACAAACCTTTGGGCTTCTCTTTTGGCTGTAGCCCAGCACCAGAGTCTCAGAAAGACTCTGATCTCTCCAAAAACTTGTTTTTTCAATGCATGTCCCAAACTTTACCCACCAGTAACTACTTCACTACCGTTTCAGAGAATTTGGCTGATGATTCCTCCAGTCGAGACTCATTTAAACAAAGCCTTGAGAGCCTCTGTAAAGGAAGATCCACTCTTGGAGCAGACACTAAATCAGGCTCTAAGGCTGGCAGCTCTGTGGATCGGAAAGTGCCTGCAGAGTCCATGCCCACCCTCACGCCAGCCTTCCCACGGAGCCTCCTAAATGCCCGCACCCCAGACAGTCATGAAAATCTATTTTTACAGCCCCCTAAACTGTCCCGAGAAGAGCCTTCTAACCCTTTCTTGGCATTTGTGGAGAAAGTTGAACACAGTCCTTTCAGCAGCTTTGCATCTCAGGCATCAGGTAGCTCTTCCTCTGCTACCACTGTCACCTCCAAGGCAGCACCCAGCTGGCCCGAGTCTCACTCCTCTACAGATTCAGCATCTTTAGCAAAGAAGAAAACCCTCTTCATCACAACTGACTCCTCCAAACTGGTGTCTGGTGTTCTGGGCTCAGCTCTTACCACTGGGGGGCCAAGCCTCTCTGCCATGGGGAATGGCCGCTCCAGTTCACCCACCAGCGGCCTCACCCAGCCCATTGAGATGCCTACTCTCTCCTCCAGCCCCACAGAGGAGAGGCCAACTGTGGGGCCTGGGCAGCAGGACAATCCTCTCCTTAAAACCTTTAGTAACGTCTTTGGCAGGCACTCAGGCAGCTTTCTGTCCTCCCCAGCAGATTTTTCACAGGAGAACAAAGCTCCTTTTGAAGCTGTGAAAAGGTTCTCACTGGATGAGCGAAGCTTGGCTTGCAGACAGGACTCAGACTCCAGTACCAATAGTGACCTGTCAGATTTAAGCGACTCTGAGGAGCAGCTCCAAGCCAAGACCGGTCTAAAGGGGATTCCGGAACACCTGATGGGGAAGCTGGGCCCCAATGGGGAACGCAGTGCTGAGCTGTTGCTGGGAAAAGGCAAAGGGAAGCAGGCCCCCAAGGGCCGGCCTCGGACTGCTCCCTTGAAAGTGGGCCAGTCAGTGCTGAAAGATGTGAGCAAAGTAAAGAAGCTGAAGCAGTCCGGAGAGCCCTTCCTGCAGGATGGGTCTTGCATCAATGTAGCCCCTCACCTGCACAAGTGTCGTGAGTGCCGCCTGGAGCGGTATCGGAAGTTTAAGGAGCAGGAGCAAGATGATTCCACTGTGGCCTGCCGCTTCTTTCACTTCCGGAGGTTGATCTTCACTCGAAAAGGGGTACTCCGAGTGGAAGGGTTTCTGAGTCCCCAGCAAAGTGACCCTGATGCCATGAACCTGTGGATTCCCTCTTCCTCCCTAGCAGAAGGAATAGACCTAGAAACCTCAAAATACATTCTGGCCAATGTTGGAGACCAGTTCTGCCAACTTGTGATGTCTGAGAAGGAGGCCATGATGATGGTGGAGCCACACCAGAAAGTGGCATGGAAGCGAGCGGTCCGAGGTGTACGGGAGATGTGTGATGTATGTGAAACAACCCTCTTCAACATCCACTGGGTTTGTCGCAAATGCGGATTTGGGGTCTGCCTTGACTGTTACAGGCTCAGGAAAAGCCGACCGCGCAGTGAGACAGAAGAGATGGGTGATGAAGAGGTTTTCTCCTGGTTGAAGTGTGCAAAGGGGCAGTCCCATGAGCCAGAGAATCTCATGCCCACACAGATAATCCCTGGCACAGCTCTTTACAATATTGGAGACATGGTACATGCTGCCCGGGGCAAGTGGGGAATTAAAGCAAACTGCCCTTGTATTAGTCGGCAGAACAAATCTGTGTTGAGACCTGCTGTCACTAATGGGATGTCACAGCTTCCTAGCATAAACCCTAGTGCCTCTTCTGGAAATGAAACCACCTTCTCAAGCGGAGGAGGAACTGCACCGGGAGCACAACCAGAGACAGACCATGTTCCCAAAGCCGACAGTACTGACAGCAGATCAGATGAGCCTCTGAAAGCAGACAGTTCGACATCAAATAGCAATAGTGAGCTAAAAGCCATCAGGCCCCCTTGCCCTGACACAGCCCCACCCTCCTCTGCCCTGCACTGGTTGGCGGATTTAGCAACTCAGAAGGCTAAAGAAGAAACAAAAGAAGCAGGGTCCCTGAGGTCGGTGCTCAATAAAGAGTCTCATTCACCCTTTGGGCTGGATTCGTTCAACTCCACTGCAAAGGTCTCTCCGTTGACTCCAAAGCTTTTTAACAGTCTGTTACTGGGTCCCACTGCCTCCAACAACAAAACTGAAGGCTCTAGCCTTCGAGACCTCCTCCACTCCGGGCCAGGAAAGCTTCCTCAAACCCCCTTGGACACAGGCATACCCTTTCCCCCGGTCTTCTCTACATCCTCAGCAGGAGTGAAGAACAAGGCCAGCCTACCCAACTTCCTTGACCACATCATTGCCTCAGTGGTAGAAAATAAGAAAACCTCAGATGCTGCAAAGCGGGCCTGTAACTTGACTGATACCCAAAAGGAAGTGAAGGAGATGGTGATGGGGTTAAATGTGCTGGACCCCCATACCTCTCATTCCTGGCTCTGTGATGGAAGACTTTTGTGTCTTCATGACCCCAGCAACAAAAACAATTGGAAGATCTTCCGGGAGTGTTGGAAGCAAGGCCAGCCAGTGCTGGTTTCAGGAGTACATAAAAAGCTCAAGTCTGAACTCTGGAAGCCAGAAGCCTTTAGCCAGGAATTTGGAGACCAGGATGTGGACTTGGTGAACTGCAGGAACTGTGCTATAATTTCCGATGTGAAAGTTCGGGATTTCTGGGATGGCTTCGAGATCATATGCAAACGATTAAGGTCAGAAGATGGGCAGCCAATGGTGCTCAAACTCAAGGACTGGCCTCCTGGGGAAGATTTTCGGGACATGATGCCAACAAGGTTTGAAGATCTGATGGAGAACCTTCCTCTGCCAGAATATACCAAGCGAGATGGCAGGCTCAATCTGGCCTCCAGGCTACCCAGCTATTTTGTAAGGCCCGATCTGGGCCCCAAGATGTACAATGCCTACGGCTTGATAACAGCAGAAGACAGAAGAGTTGGCACAACAAATCTTCACTTAGATGTGTCTGATGCAGTTAATGTGATGGTGTATGTTGGGATCCCCATCGGGGAGGGTGCTCATGATGAAGAGGTTCTCAAAACAATTGACGAGGGAGATGCTGATGAGGTGACAAAGCAAAGGATTCATGATGGAAAGGAGAAACCCGGTGCTTTGTGGCATATCTATGCAGCCAAGGATGCAGAGAAGATCCGGGAGCTGCTCCGAAAGGTTGGAGAAGAGCAAGGCCAAGAGAATCCCCCTGATCATGATCCAATTCATGACCAAAGTTGGTACTTGGACCAGACCCTACGTAAGCGGCTCTATGAGGAATATGGTGTGCAAGGCTGGGCCATTGTTCAGTTCCTGGGAGATGCTGTCTTCATACCTGCTGGAGCCCCACACCAGGTGCACAACCTATATAGTTGCATCAAAGTCGCAGAAGACTTCGTGTCTCCAGAACACGTAAAGCACTGTTTTCGCCTGACGCAGGAATTCAGGCATCTCTCTAACACTCACACAAACCATGAGGATAAACTGCAGGTGAAGAACATCATTTATCACGCAGTGAAAGATGCTGTTGGCACCCTCAAGGCTCATGAGTCCAAGCTGGCAAGATCGTAGGCGTGGAGAAATTTCAAACTCCCCTGTGAAGCAGGTCTTTCACTCACAACACATACAGGGAACGACAGGGTTCTCTGCTGGAGCAGAGGTCCTTCACTTGGAGCCAGTGTGGTCAGTATTACAAACTCTCCAGCCACTCTTTTCTACGCTGCCTCAACACTGAAGGTTGACACAGGAAAGTCGCACTGTTCACACACACAGTTTCAGACTCCAAGCCGAGGGTGCCACATCCCTATCCTGTGGCCTTTTGGGACTTCAGATTGCCTGAACATCACTGGGCTGTCCTGCACATTCTCATGATTTGAGATTTGTGGAAACCAGGAATGTGGGCACACCTTTCTTTTTTTTTTCTCTTGTGCCTAGTTAAGTGGGAATGTGTTTGGAGGTAGGGGGAAATCACATACCTGGTACATGTGGGGGCTAATTGTTTAAACACGCCTGGTGGAAGCCTGATGGTGTCTCTACACATGACCTCTGACACAGCCCATCCCAGGAGATGGGTGAAGCCATTCCCCACCATCTCTCTCCCATGAACACTGAAGTCTTGAAGGACCCAGGGAGAATCCACTGCTTTTCCCAAGAGGCTCCAGGATTAGGAAACGTGTGTATTTAGTGAAAAATAGGTTTGTAGTGAAATAGTTACTATTTCATGAAAGTAGATATTTTTAGAACTTTTGAAATACCACAGTTTTTTTCCTGGATTATGAGGAAAGGCACATTACATTTAGTCTTCCTTCGAGAAAACTCTTTGAAGAAATAAGATTTTTAGAAATCAACTGCCCATTATAGCACAAAAATCAGCCAAAGCAGAATTTAAAAGAATTGGCTTTTTAGGGTTCTTTTAATTTCACCCCCCTCCCATCTCAGCCCTATCTTGAGGGAACAGCCATCTTGAGAAAGAACTTTGTCGTGTCTGAGCTGTGGTGTGTTCCATGCATACACACACTGGTGACTCCAGGAACCATTTCCACCTATTACCAGCGTTCCCTTGGGACTCCTCTTGTAGTTCCAAATTCAAAGGAAAGTTTGCTTTCCTACATGAGGCGTTTTGTTTTGGGAGTTTTTTTGTCCAGAAATATTTTCAGCAAAACTTTCCAACTCAGTGGAGTTTTATTAAGAATTTATTTGAAAATGATGGAATTCATTGGCCCATAGATACATTGGAAAATGTATCTATCTTCTTCCCAGCTGTACTGTAGTGCCCTGCAGGCTTGTTTATATGTTCACAGTTACTTTTTTTTTTTTTTAATAAAAGTCATTTACTGTAGAATACTTTTAATTTCACTTTCTGTATTTTAATTTTGTTGAAGGGCTGATTGGGATTTCCATGTTCTTATTAAAAATCTAACAAATCTGTTCATA EMBV3_11655 TTTCCTCGAGCAATACCCACAAAAATGGAGGGTTCCCCCGCATCTTCCTGAGGCTCCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_20860 TCTTGAAGAAGTGGGCCAATCTAGATCCAGGTCTGGACAGCAGCATCTGAAGTAAAGCAT Variant GeneID:518130|IFLTD1:XM_002687733:58_cdna 636^822 1 EMBV3_07766 GeneID:518130 5 GENE IFLTD1 NULL intermediate filament tail domain containing 1 EMBV3_29094 TGCAGTGGGACTCAGGGTGTGTGAGACAGAGTGAGATCATTGCGGAAACAGAACGGAGGA Variant GeneID:524132|LPP:XM_002684839:184_cdna 44^88 1 EMBV3_43379 GeneID:524132 1 GENE LPP NULL LIM domain containing preferred translocation partner in lipoma EMBV3_03712 GGAATAGGTACAGGTGTTTTATCCAGAGTAGTACCTAGGGATCAAGGAGCACACACACGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05885 TTTACAGGTCCCGAGCCTGGGTTTGGGGCCCCGTGGGAGAGGAAGGGCAGGGAAACCAAA Gene BVV0102_412540 + 1 EMBV3_17356 GK000016.2:3032046-3099022 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_15803 CAGCAACCAGATGATCGTGCAACTACCACATCACTTTCTTGGAAACGTGTAAAAGGATGC Gene GeneID:281814|HIF1A:NM_174339:20_cdna UTR3_Alt 2 NULL GeneID:281814 10 GENE HIF1A NULL hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) EMBV3_03634 CAAGAAGCTGGGTTTGGACTACTCTTATGATCTGGCTTCCCGAGCTAAAATCTTCCGGCG Gene GeneID:317710|PLBD1:NM_001101044:14_cdna Constitutive 0 NULL GeneID:317710 5 GENE PLBD1 FLJ22662 phospholipase B domain containing 1 EMBV3_07797 CAGAGACCAAAGAGGAAGAGGAAGAACTCACGGGTGACCTTTAGTGAGGATGATGAGATC Gene GeneID:282319|PPP1R8:NM_174582:33_cdna UTR3_Alt 3 NULL GeneID:282319 2 GENE PPP1R8 NULL protein phosphatase 1, regulatory (inhibitor) subunit 8 EMBV3_08089 GCCCATTGAGAAGTCCCAGTTCATCCACAACAACCTCAAAGATGTGTACGTCTCGATCGC Gene GeneID:100299286|LOC100299286:XR_084083:496_cdna Constitutive 0 NULL GeneID:100299286 26 PSEUDO LOC100299286 NULL similar to dynamin associated protein 160 EMBV3_26438 GGGCTGGAGTCACCTTGCGGGTGCTTAGAATGATGAGGATTTTTTGGGTGATTAAGCTGG Gene GeneID:525901|KCNG3:XM_002691247:233_cdna Constitutive 0 NULL GeneID:525901 11 GENE KCNG3 NULL potassium voltage-gated channel, subfamily G, member 3 EMBV3_17264 TTGCTGTACGAGCTACCGATGAGACCCTCAACACTCAACCCGAGAAGCTTATTTGGAACG Spike ESK1001 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_01570 AAGCACAGTAGCAGACCCCGGACCATCAAAGCCTAGAAGAGCACAGAGGCCTAATTCTCT Gene GeneID:407127|BMPR2:XM_002685492:236_cdna UTR3_Alt 2 NULL GeneID:407127 2 GENE BMPR2 bmprii bone morphogenetic protein receptor, type II (serine/threonine kinase) EMBV3_24690 TACAACAAAGACTCAAACTTTATAACAAAGGCTCTTACAGCACTACTTTCAGATGATAGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_29106 ACATAGGTGCATTGGGCTTATATGGAAGTCTGTTAGCAGTGAGCATCTGGCCACTAAGCT Gene GeneID:100125286|FAM177A1:NM_001103329:2_cdna UTR3_Alt 2 NULL GeneID:100125286 21 GENE FAM177A1 MGC148766 Protein FAM177A1 EMBV3_03393 CTTAATGTCCCATTTGTCATCCAAGGAACTGGAGAATGTGCCTACCTGACTGACTCTGGA Gene GeneID:100297676|LOC100297676:XM_002687838:178_cdna Constitutive 0 NULL GeneID:100297676 5 GENE LOC100297676 NULL similar to C-type lectin domain family 2, member g EMBV3_35602 ACTACTGTCTCTCCAACAGGTTCAAGCAACTCTGGCGACCCACCTAAGTCTGTGAGCACA Gene GeneID:527351|LRRN4:XM_002707724:639_cdna Constitutive 0 NULL GeneID:527351 13 GENE LRRN4 NULL leucine rich repeat neuronal 4 EMBV3_35806 TTCCGGGTCTTCTGACCACACTCTCCCTCTATGAGTGACTGCTCTGGAACAGCCTGCTTT Gene GeneID:512193|BTBD12:XM_002697885:455_cdna Constitutive 0 NULL GeneID:512193 25 GENE BTBD12 NULL BTB (POZ) domain containing 12 EMBV3_18189 CCTCATTAGTTTGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGTGTGGCTGCGCAGGCCTG Gene GeneID:539076|GGNBP2:XM_002695616:1_cdna Constitutive 1 NULL GeneID:539076 19 GENE GGNBP2 NULL gametogenetin binding protein 2 EMBV3_07789 TGAAGGTGTTAAAAAAAGCTTCTTTAAAAGGTTCTGTTTACAGAGGAAGATGTGAAATTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_31905 GGTGCCAAGGCTTCTTTGCTGCATGTTTTATCCCGCAGGGCCCACCCAGTTCTCTCTCTT Gene BVV0102_359535 + 1 EMBV3_14629 GK000025.2:13339566-13344233 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39072 TCAAAGCACAGCAAGTCCAGCCCCCACCATGGGCCCAGCTTTGGTACTCTCCCAGATTCA Gene GeneID:100141142|SYCE2:XM_002688757:59_cdna Constitutive 2 NULL GeneID:100141142 7 GENE SYCE2 NULL synaptonemal complex central element protein 2 EMBV3_32702 TGTCTCCTGGTGCATTAACCTTCGCTATCATATGGCCTTTTATTGCTCAGTGGTTGGTGC Gene GeneID:353160|ACBD5:NM_181038:64_cdna Constitutive 0 NULL GeneID:353160 13 GENE ACBD5 NULL acyl-Coenzyme A binding domain containing 5 EMBV3_43451 GAAGGGCACGGGCATCGCAGCACAGACAGCAGGCTGTGAGGGCCAGGAAGCCTACACCTG Variant GeneID:509816|MRPS11:NM_001035078:17_cdna 429^612 3 EMBV3_09725 GeneID:509816 21 GENE MRPS11 MGC127419 mitochondrial ribosomal protein S11 EMBV3_09853 GATGATAACATGTTTCAGATTGGGAAAATGAGGTATATCTTTAAATCCTGAACAATGGAG Variant GeneID:533984|SUB1:NM_001105407:48_cdna 248^342 2 EMBV3_25540 GeneID:533984 20 GENE SUB1 NULL SUB1 homolog (S. cerevisiae) EMBV3_11803 CTGTGGATTTTAATTTAGAGAAGATATTAGAACAAAGAAAGTTTGCTTTTCATTCTCCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_43136 CCTCCTGCACTTCCTGTGCCTGGCGGCTTGGTCCTGTTACAGAAGTGAAAACTGACATAT Variant GeneID:282238|GABRA4:NM_174543:8_cdna 120^238 1 EMBV3_24243 GeneID:282238 6 GENE GABRA4 MGC139557 gamma-aminobutyric acid (GABA) A receptor, alpha 4 EMBV3_11917 AGACATAGACGTGACCTTCTGGGCCGGAAACCTGTCTCTTGACCTACAGGTAGTGGCACA Gene BVT0102_425964 + 0 NULL GK000019.2:34672050-34685356 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29495 CCAAAGTTTTAAAGGGGAGAGTTCTAATAAGCATTTTACAAACGCAAATGATGAAATGAG Gene BVV0102_319871 + 1 EMBV3_24876 GK000002.2:25776192-25826620 2 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00104824 TCONS_00104822 TCONS_00104823 1 XLOC_062460 Coding TCONS_00104822 XLOC_062460 Coding Coding MYO3B 2:25823913-26260849 j TSS77533 6140 1 TCONS_00104822_7 1261 0.0820846905537459 36 0.986029958689508 7.42721044489108e-05 0.000484175306054032 0.000405562119879329 0.000232321542167587 0.000213228001722025 0.000127064174472034 0.00032604579148677 6.74133231969438e-05 0.000189988395064054 1.71520464231364e-05 1.657767255775e-08 3.58700757518727e-07 9.28060414180151e-06 2.93533718838135e-05 1.44501723677381e-10 2.04535508333373e-47 0 0 0.000185293665330427 0.000128123682404359 1.99960419367803e-05 0 7.51434076814333e-09 0 0.000416365230849819 0.000221508994181117 0.000311061432280712 4.21950849921213e-09 1.9877643284631e-08 5.48415301130888e-05 XM_002707802.3 LOC536123 PREDICTED: Bos taurus myosin-IIIb-like (LOC536123), transcript 0.0 7184 99.16 0.660097719869707 NM_138995.4 MYO3B Homo sapiens myosin IIIB (MYO3B), transcript variant 2, mRNA. 0.0 5591 90.88 0.654397394136808 TCONS_00104822_7 sp|Q8WXR4|MYO3B_HUMAN MYO3B_HUMAN Myosin-IIIb; 0.0 2359 90.76 0.984139571768438 5 coding 0 0 0 0 0.083427770156219 0.618887811000857 -0.0484654994951169 0.324823854255893 ATGCCCCAAAGACCTGAACTCCCTGATGGCTTTGGGGAAGGACTTTTAAAGGCAGTGAGACATCTGTATGGATTGTTTCATTACAACGCCACGATGCTTGGACTTGAATCGCTTCCAGATCCCACAGATACCTGGGAAATTATAGAGACCATAGGTAAAGGCACCTATGGCAAGGTCTACAAGGTGACTAATAAGAGAGATGGGAGCCTGGCCGCAGTAAAAATTCTAGATCCAATCAGTGATATGGATGAAGAGATTGAGGCAGAATACAACATTTTGCAGTTTCTCCCGAATCATCCCAATGTTGTAAAGTTTTACGGAATGTTTTACAAAGCGGATCACTGTGTGGGAGGACAGCTGTGGCTGGTCCTGGAGCTGTGTAATGGGGGCTCAGTCACCGAGCTTGTCAAAAGTCTACTTAGGTGCAACCAGCGGTTGGACGAAGCAGTGATCTCATACATCTTATATGGGGCCCTCTTGGGCCTTCAGCATTTGCACAATAACCGAATCATCCACCGTGATGTCAAGGGGAATAACATTCTTCTGACAACAGAAGGAGGAGTTAAGCTCGTTGACTTTGGTGTCTCAGCTCAACTCACCAGTACACGTCTACGGAGAAACACATCTGTTGGCACCCCATTCTGGATGGCCCCTGAGGTCATTGCTTGTGAGCAGCAGTATGACTCTTCCTATGACGCTCGCTGTGACGTCTGGTCCTTGGGGATCACAGCTATTGAACTGGGGGACGGAGATCCTCCCCTCTTTGACATGCATCCTGTGAAAACGCTCTTTAAGATTCCAAGAAATCCTCCACCTACTTTACTTCATCCGGAAAAATGGTGTGAAGAATTCAACCACTTCATTTCACAGTGTCTCATTAAAGATTTTGAAAAGCGACCTTCGGTCACGCATCTCCTCGACCACCCATTTATTAAAGGAGTCCACGGAAAGCTTTTGTTTCTGCAGAAGCAGCTGGCTAAGGTCCTCCAAGACCAGAAGCATCTAAATCCTGTTGTTAAAACCAGGCATGAAAGGATGCACACCAAAAGACCCTATCATGTGGAAGATGCTGAAAAATACTGCCTTGAGGATGACTTGGTCAATATGGAGGTCCTGGATGAGGATACAATTATTCATCAGCTGCAGAAGCGTTATGTGGACTTACTTATTTACACATATGTTGGAGATATCTTAATTGCCTTAAACCCCTTCCAGAATCTAAGCATATACTCTCCACAGTTTTCCAGACTGTATCATGGAGTGAAACGTGCCTCAAATCCCCCCCACATATTTGCATCAGCAGATGCTGCTTATCAATGCATGGTTACTTTCAGCAAAGATCAGTGCATTGTCATCAGCGGAGAAAGTGGCTCTGGGAAGACGGAAAGTGCCCACCTGATCGTTCAGCATTTGACTTTCTTGGGAAAGGCAGATAATCAGACCTTGAGAGAAAAAATTCTGCAAGTCAACTCTCTGGTGGAAGCCTTTGGAAATGCATGCACTGCCATCAATGACAATTCCAGCCGTTTTGGAAAATATCTGGAAATGATGTTTACACCAACTGGAGCTGTGATGGGAGCAAGAATCTCTGAATATCTCCTTGAAAAATCCAGAGTTATAAAACAGGCAGTAGGAGAGAAAAATTTTCACATATTTTACTATATTTATGCTGGTCTTTATCACCAGAAGAAACTTTCTGAGTTCCGACTTCCTGAGGAAAAGCCTCCTAGGTACCTAGCTGATGAAACTGGAAGGGTGATGCATGACATAACTTCCAAGGAGTCTTACAGAAGACAGTTTGAAGCAATTCAGCATTGCTTCAGGATTATAGGATTCACTGACAAGGAGGTGCACTCAGTGTACAGTATATTATCTGGGATTTTGAATATTGGAAACATTGAGTTTGCAGCTATTTCCTCTCAGCATCAAACTGACAAAAGTGAGGTGCCCAATGCAGAAGCCTTGGAAAATGCTGCCTCGGTTCTCTGCATCAGCCCTGAAGAGCTCCAGGAGGCTCTCACCTCACACTGTGTGGTCACTCGGGGTGAGACCATCATCCGCGCCAACACTGTGGACAGGGCCTCGGACGTCAGAGACGCCATGTCCAAAGGCCTGTACGGGAGGCTTTTCAGCTGGATTGTAAATCGCATCAACACGCTCCTGCAGCCAGACAAAAACATATGTACTGCAGACGATGGTATGAATGTGGGGATCTTGGACATTTTTGGATTCGAAAACTTTCAGAGAAATTCATTTGAGCAGCTCTGCATAAACATCGCCAATGAGCAAATTCAGTACTATTTCAATCAGCATGTTTTTGCTCTCGAGCAGATGGAGTATCAGAACGAGGGCATTGACGCTACCCCCGTGGAGTACGAGGACAATCGCCCCCTCCTGGATATGTTCCTCCAGAAACCCCTGGGACTGCTTGCGCTTCTGGATGAGGAAAGCCGGTTTCCTCAGGCAACGGACCAGACCCTAGTTGATAAATTTGAAGATAATCTTCGATGCAAATACTTCTGGAGGCCCAAAGGAATGGAGCTGTGCTTTGGCATTCAGCACTATGCTGGAAAGGTATTATATGATGCTTCTGGGGTTCTTGAGAAAAACAGAGACACTCTCCCTGCTGATGTGGTGGTCATACTGAGGGCATCAGAAAACCAGCTTCTCCAGCAACTCTTCTCAATCCCTTTGACTAAAACAGGTAACTTGGCCCAGACAAGAGCCAGGATAACAGCAGCCTCAAGATCTTTGCCTCCGCATTTCAGTTCTGGGAGACTCAAGGTGGACACTCTGGAGGTGATACGGCATCCGGAAGAAACCACCAACATGAAGGGGCAAACCATGGCTTCTTACTTTCGGTATTCTCTGATGGATCTGCTCTCTAAAATGGTGGTGGGACAGCCCCACTTTGTACGCTGCATCAAGCCCAATGATGACCGAGAGGCCCTGAAGTTCTCCACAGACAAAGTGCGGGCCCAGCTCCGCTCCACGGGCATCCTAGAGACAGTCAGCATCCGCCAGCAGGGGTATTCTCACCGCATCCTCTTCGAGGAGTTTGTGAAAAGGTATTATTACTTGGCATTCAGAGCACATCAAACACCTCTTGCTAGCAAAGAGAGTTGCATCGCTATCTTGGAGAAGTCCAGATTAGATCACTGGCTGCTGGGAAAAACAAAGGTTTTTCTCAAGTATTATCATGTTGAGCAGTTAAATTTGCTGCTGCGGGAAGTCATAGGCAGAGTGGTTGTGCTGCAGGCCTATGCCAAGGGGTGGCTGGGAGCCAGGAGATACAGAAGAGTCAGAGAGAAGAGAGAGAAGGGGGCTGTTGCCATCCAGTCAGCCTGGAGAGGATATGATGCTCGGAGGAAATTTAAGAAAATAAGCAACAGAAGGAGTGAGCCTGCTGTTCATATTCACGCAGGGTGCCCTTCAGACCAAAGCAGTGATCCACAGCCCACCATCACAGGGGGTCGCAGTGGAACTGCACAGGGTCAGTTCTCCAGCGAGCCTGGTGACCACAAAGTTCTGAGGGGCTCTGGCAATCATAAAAGCAGCCCACAAGCAGAATCCAGCAATGGCCATGCAGAGGCTTCAAGCACCTCTCCTGTCACTGAGAAAAATTGGCATTCACAAGCCCAGAGTTCTTCCAAAGGGTGTGATGTCTTCGCAGGACACTCAAATAAGCACTCAGTTTCTGGGACTGATTCTGTCTTTTCAGACATGCCATGCTGTTCCAGATTGCCCAGGACTGAGTCCTTCGAGGGGAGCCCCTGCAAAATCTGATTCAGAAAATGGTCTTGCACAGAAGCAGCGAACACCTCGCCGAAGATGTCAGGAGCCCAAAATGTTGAGTAGCCCTGAGGACACCATGTACTATAACCAGTTAAATGGAACTCTAGAATATCAAGGGAGCAAGAGGAAGCCAAGAAAACTTGGCCAAATCAAAGTGCTTGATGGAGAAGATGAATATTACAAATCTCTGTCGCCTGTGGACTCTATCCCTGAGGAAGACAACTCAGTCCACCCTTTCTTTTTTTCTTCATCTTCAAAAGGGGCATCTTTTGCTCAGCACTGAGCTATACTTTCTGCCTCCCAAGTCTGTTGAGGACACCTTCATCACCTTGACGGTAAAAAGAAAGGAATGAACTGGAAAGAAAATTTGGACTCATCAGAATTCGTGTCACATCATTTTGTAGCTGTCCATTCCCTGGTTGACTGTCTCCATGGGGCCATGAGTAGCTGCAGAGGAAGTATCTTGTCTCGTCCATCTTTGTGGCCACAGAGTCTAGCACAGTGCCCAGCACAGGGAGGACATGCCCACCTTGAGTGAGTGGAGAGACTTAGTTACACAAACATATCTGAAGTTACTTTCAATTATATGTGATATAGGATTGATCACTTTTCTTATACCATAAGCTCTGATTTTTCACTGAAGCTTGGACTAGTCCTATTTAATCATATTATACCATATATGACTCAGTGTGATCCAATGCAACAAACTCTTTTGAGTAACTACTCTGTGCAAAACAATATGTGAGACTGCTGTGTGATATGAAAATCCAATAAGACCCTTTCTCTAGAAAAGATGTTCTTTATATTCTTTCTACTTTAAACATATTTGGCAGATAGTACACATGGGAGTACCTAAATTTTGACAAAAATATACTTAAGGAAATAGAAAAAATAATTGTTACCAAAGTTTTAAAGGGGAGAGTTCTAATAAGCATTTTACAAACACAAATGATGAAATGAGGTATTTAAAGATCTCAGAAATTGTAATGTTACAAGAAAAAGAAATAGAGCCAATTATTCAATAGTTAAACTTTACTGTTTAAAAAATGAGTCTTGATCTTTTTTCCAGATCTTCTCCCTAAATGTATGTTCATAAGGTATGCAAATAGAGCAGAAACACAAATGCATTTTATTTTATTGTTTAAAATATAGTATATAGAATATATAGATTTTAACATTATTATTAATATGAGTAGTTTTGGCAATTTCACTTTCATCATTGATTCATCTACTTTTGGTTTGATAATGTTAGCTGTTCAAACTGTTGAATATAAATGATCGTAATCTCCCACTTGTCTGTGTACAATTGTATACACAGGCTTGTTTCTAATTAAAATATATCCATAAATAAAGTTTAAAAGGAAATAGAAGTAATTATAAAATCATAATTCAGAAGCTCTAAAATATCTGGTCACACAGAATAACTGCTTCGGTAATATCATAGCTCCTGACAGTACTTTAGAAATGCTGCTCATTATCAGTCACTGCATAGAGAAGACAGACTACAGATGTTACTCTTTGACTAGTTATAATGCCACAAACTCAAAGAGCATTCTTAAATCTTTAGATGAGAATGATGCAAACTGGAATCTCATAGATGTCTTACTAGATTTATGAAGGTAATGTGCATATAGCAAAACCAAAGCAAAAGTCAAACAGTCGAGAGCATTCTTCTTCTCGATGCCCCAAACTTAGTCCCTCTCCCAGAAGCAGTCGTTTTTAAAAATTATTTCTAATTCTTTTAATGGTTTCCATCATGTCTCTGAATAATTTGCTTTGATGTTGATTTGTCATTTTAGACAATATCTACTCTCCCCTCTATGAAAGATGTGCATTTATGTCAATTTCTTCACCCCTCTCTTCTTCCAGTGCTTACAATTTTGTGTTTAAATTGTTGTTGATTACCTTTTAAACTTTAAATTATGTAATTAAATACCTATTTTTTGTGCCATTGACTTCAGATAGTAGCTCTGTGAGAATGCCTGGCATGAAGAAAACCAGAAGACTGAAGGATAATATCAAAACAGATAGAATAATGATCCTTGGGCAAAATAGAAATAATTCCAAGAATAGTAGAACAGTAGTTTTAAAACTTCATGGAAACCATTGGTGTTCATGTTCTGAGCTACTGTTTCTTCCTCCATTTTGGTTCATCTGCAGATATGCCTCCATCTCCTTTCTAAACTTAATTTTTAAATATAGTACATATACAGAAATAGGCACAAATCAGAAGGCTTAGCTCAATAAGTTATCAGAAAGCGAGTATCTATGTAACCACTCCTACAGTCAGGAACAGAACACTGTCAGCACCCTAGAAGCCTCCTTCCCAATCACTACCACCCCCA EMBV3_41022 AGATTTTTGCTGACTGGTTCCATCACATCTTCGTGCCCGCAGTGAAGGAGCACTTCCGAG Gene GeneID:517625|JRK:XM_002692596:353_cdna Constitutive 0 NULL GeneID:517625 14 GENE JRK NULL jerky homolog (mouse) EMBV3_15612 GCGGTGCCTGCCCTGAAGGACCCCGGTCAGGTTCTTGGCCTGGAGTTGGGGATGAAGAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_15850 GCTTGATCCTCCACTACCTGAGATGCCGAAAAAGGATCATGGCCCAGCTGAAAACATGTC Gene GeneID:613590|XRCC4:NM_001081615:18_cdna Constitutive 0 NULL GeneID:613590 7 GENE XRCC4 MGC148661 X-ray repair complementing defective repair in Chinese hamster cells 4 EMBV3_16778 CTTCTGCCTCTTGCTCCCAACGGCTGTGATCGTGTTCTCCTATGTGAAGATCATTGCCAA Gene GeneID:541280|OPN5:XM_002697274:38_cdna Constitutive 0 NULL GeneID:541280 23 GENE OPN5 NULL opsin 5 EMBV3_07098 CGGGAGGACAGGCCATCTTGTCACTTGTTTTCATTGTGCCAGAAGACTAAAGAAGGCTGG Gene GeneID:514225|MDM4:NM_001046169:61_cdna Constitutive 0 NULL GeneID:514225 16 GENE MDM4 MGC138053 Mdm4 p53 binding protein homolog (mouse) EMBV3_15564 AATGGTTTTGATATATGGATGACATCAGAGGGGCACGTGGCGTATGTATTAACTCAGGAA Variant GeneID:785845|ACP1:XM_002698404:327_cdna 409^522 1 EMBV3_12322 GeneID:785845 26 GENE ACP1 CC2D2B acid phosphatase 1, soluble EMBV3_20214 ATCCTCAAGTTCCTGTGCAAAGACCTGTGGGTGGCTGTGTTCCACAAGCAGATGGACAGC Gene GeneID:512261|TRAPPC6A:NM_001034420:193_cdna Constitutive 0 NULL GeneID:512261 18 GENE TRAPPC6A MGC127669 trafficking protein particle complex 6A EMBV3_35711 AAGGCACAGCTGGAGCATCTGCATGCCAACCCCCACTCCCTGCGAACCATTGCCAACTTT Gene GeneID:525946|EPHA1:NM_001144095:682_cdna Constitutive 0 NULL GeneID:525946 4 GENE EPHA1 NULL EPH receptor A1 EMBV3_24445 AGAGGAGCTTGTAGCAGAGCAAGCCATCAAGCACTTGAAGCAATACAGCCCTCTACTTGC Gene GeneID:506562|BZW1:XM_002685506:29_cdna UTR3_Alt 2 NULL GeneID:506562 2 GENE BZW1 BZAP45 KIAA0005 basic leucine zipper and W2 domains 1 EMBV3_27598 GTTATGCCATCCTGACTGAACTCTTCCTGCTGACTGGAGAAGCAAAAGGAGGTGGAATCC Gene BVT0102_050592 - 1 EMBV3_18540 GK000006.2:3432300-3456348 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00202313 1 XLOC_123940 NonCoding TCONS_00202313 XLOC_123940 NonCoding NonCoding - 6:3432393-3434097 - TSS151868 750 1 TCONS_00202313_1 44 0.453333333333333 2 0.560775102759836 0.000126986365742547 8.03875729485195e-05 0.000209757789008381 0 0 0 8.55317220244648e-05 0 0 0 1.8313477358833e-05 0 0 0 0 0.00119732234287118 4.42727183305808e-05 3.34545357654718e-05 0.000497184477874567 7.67086221352609e-05 3.6428762292501e-05 3.95768454513829e-05 0.000122320581467205 4.47056260402961e-05 0.000120093599606985 4.69697613493532e-05 0.000132807442889767 2.56137568861011e-05 0.00169371925679988 0 0 noncoding 0 0 0 0 -0.029098254901539 0.791174504543438 0.000426166786521381 0.992553206470405 GGCTCAAAGCAAAGTTATGCCATCCTGACTGAACTCTTCCTGCTGACTGGAGAAGCAAAAGGAGGTGGAATTCAGAGAAAACCGGAAAGATCTGTTTCTTTTAATACAAAGTGGACTCCTGGATGGCCAAGGGAGCTGTGGTTGCCACCAGTATTCGACATGACCATGGAGTATCGGACTACATATCCATTGCCTGGGAAAAAGATCAAAACTCATAAGTATGGTTTCTACATATTGCTTTCAAGCCATGGAAAAACTGAAAGTGGAACCATTGTAGTCCAGGACCATCTGTAGTTAAAAGCAGGATTCTGACTGAGCCCAGATTCTGATTCTGCCCTTTAATTGTTCTGTGACCTTCACCAATGTAGCCTATATATTTCACTTTTACTCATCTGCAAAATAGCAATGATAAACTTACTGATTATGAGAAAAACAGTTTAGCACATGTCAAATGCTTGGAACAGGGCCTGGCTTGGAATTGGGCACTAGTATTCACGTATTACTGTTGTTTTCTTTGCTTTAGTAATAGGCAATGTAACTCCTACACAGGCTCCATTCCACTTCTGTCTCCTCTCAAGTGTGTTTCCCTAACAGTGATAGTCTCAATTTATACCACTTGTAATAGGTGTACTCAATTAATTACTTGTATTACTTGTGAGAGCTTCTTGTGTCCTAAGAATAATTCAAGAGCTGGGATAAACAGGGTGGACAATCTCCTGACCCTTAAAAAAATGTATATTCTCTTTGGAG TCONS_00204331 r 5' 73 TCONS_00204331 r 5' 73 EMBV3_36015 GGTGTCCCATTTGGGGAAATACTGTTCCTGTTTAAGCCCAGCAGGTGTGCTAATGCAAGG Gene BVT0102_285060 + 0 NULL GK000018.2:37115997-38325140 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_02131 CTGGTGTAGAGGCCCCTCCAGAGTCCACAGGTGTCTTATCAGAAGAACAGATCCGTCTGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_18180 GGTTCGGGCCTAGCGGAGCCGGGACTGGAGCAACATGAACCGTGAAGACCGGAATGTGCT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10172 GCTACAATTACCTGAAACCTCGGGCAGAAGAGGAGAAGAGGCTTGCAGCCGAGGAGAAGA Gene GeneID:100301031|LOC100301031:XM_002686940:63_cdna Constitutive 0 NULL GeneID:100301031 4 GENE LOC100301031 NULL similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E EMBV3_22266 GAGGTAGGTAACAAGAGGAGTTTCTTGAGTAGATGACCTCATCCTGTCTGCAAAATAAAG Gene GeneID:504339|C14H8orf47:NM_001077844:18_cdna UTR3_Alt 2 NULL GeneID:504339 14 GENE C14H8orf47 C8orf47 chromosome 8 open reading frame 47 ortholog EMBV3_07902 ACCCCCAGGACCCCATCTCCATGGGCAATGGAGCTGGCTCTGGGGTGCCCTTCCACTGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42384 TCGAGATCTGGATGAAGGACAAGTCCGAGGTGGAGGTCGTGGATCTGATCCTGAAACTTC Gene GeneID:100139352|LOC100139352:XM_002688003:144_cdna Constitutive 1 NULL GeneID:100139352 5 GENE LOC100139352 NULL similar to Protein FAM116B EMBV3_35574 AACAGTTTTTCCACAGAGAGGGCGGGAGGTGAAACTCAGGTTGTAATGCAAGCAATGGGG Gene GeneID:513585|C14H8orf33:NM_001046153:86_cdna Constitutive 2 NULL GeneID:513585 14 GENE C14H8orf33 C8orf33 MGC137664 chromosome 8 open reading frame 33 ortholog EMBV3_12541 GCTCAAGGTCACAAAACAGGTGTACCAATTTCAGCTTCCATAAGCAATGCACGAAGCCCC Gene BVV0102_407880 + 0 NULL GK000013.2:76487994-76501072 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00046317 TCONS_00046314 TCONS_00046316 1 XLOC_026688 NonCoding TCONS_00046316 XLOC_026688 NonCoding NonCoding - 13:76490980-76499323 - TSS33617 782 2 TCONS_00046316_3 71 0.254475703324808 4 0.906736993526732 5.08992534477455e-08 6.93684497655865e-10 0.000733134446941779 0.000924493181084234 0.0014032003810044 2.08202822778604e-24 0.000108180522016543 1.39329692090503e-11 7.94629666199615e-05 0 1.53104976450185e-06 0 0 0 0 0 0 0 4.37974655063644e-05 1.19696223551812e-08 4.09717230129902e-05 0 0 0 1.66317947007955e-09 0.000501632226571519 1.01978970284206e-23 0 3.10394940420526e-05 0 XR_237132.1 LOC101905104 PREDICTED: Bos taurus uncharacterized LOC101905104 (LOC101905104), 2e-21 107 98.39 0.0780051150895141 0 noncoding 0 0 0 0 -0.534674152201856 0.0881793694147295 0.0147648802215945 0.788697498854763 CTGTTAGAACAACACACCAATAAATGTCCAGGTGCCGCCCTCCTTCCCAAGGTAATGACATCTGACTTTCCGAGGTGGGGCTTGGGCCTCCATAAAGCTCTTCAGGTGATCCTGATGGGCAGCTCGATCTCAGAGCCTGTAGCCTGGTTGGAAGAACATCCCAGGCAGAAGGGAGAGCAAATGAAAAAGACCCGAGGGGGCGTCTGGATCTTCTAAGAAGAGGAGGAAGGCGAGTGAGGCCAGAATGAGGGATTCAGCGCTGGAGGTTGATGAGCAAAACAAAGGCCACTCACATTCCCTCCAGCATCACTGGTGCGGGTGCGTCCCGCACCCTGAGCTGTGTGCTGAGAGATTGCTCCGTACGGGAATCTTTTGGTCTCCATGATAACCCCCTGAGGCCGGCACTAATCCCAGTCCGTTCTCCAGATGAGGAAAGTGGTCTGCTCAAGGTCACAAAACAGGTGTACCAATTTCAGCTTCCATAAGCAATGCACGAAGCCCCACAGCTCCACCAGCTCTAATGAGAGAGATACTGTCTTTACCCACTGAGAGCTCCGAGTCATCTAGAATTCAGAAGGAAACACTTTCCGACTGTGGCCCGTCAGCACCAGCCTTCGGCAGTCAGTCATCACAACAGAGAAGTAGTTGACCACCTAGGCAGTGTCCCTTAATTTCAGGATTAAGGGACAGGTCTGTTTCACCCCAAACCTCTTTCTGTGTGGACAGCTGAGAGTCTACTATTCGTGCCGCTAACGGAAGTCTTTTAAAATAAAATTTATTTT TCONS_00044011 TCONS_00044014 TCONS_00044015 TCONS_00044016 TCONS_00044018 TCONS_00044019 TCONS_00044020 r 3' 2504 TCONS_00046320 TCONS_00046321 TCONS_00046322 TCONS_00046323 TCONS_00046324 TCONS_00046325 TCONS_00046326 TCONS_00046327 TCONS_00046328 TCONS_00046329 TCONS_00046330 TCONS_00046331 TCONS_00046332 TCONS_00046333 TCONS_00046334 TCONS_00046335 TCONS_00046336 TCONS_00046337 TCONS_00046338 TCONS_00046339 TCONS_00046340 TCONS_00046341 TCONS_00046342 TCONS_00046343 TCONS_00046344 TCONS_00046345 TCONS_00046346 TCONS_00046347 TCONS_00046348 s 3' 1194 EMBV3_03501 ACATCATGGTCTGCGGCTCCATGCCGTATGACGACTCCAACATCAAGAAGATGCTGCGCA Gene GeneID:529193|TSSK1B:NM_001083710:76_cdna Constitutive 0 NULL GeneID:529193 17 GENE TSSK1B TSSK2 testis-specific serine kinase 1B EMBV3_24226 AACAGAATTTCCTCCAGGATAAAGAGGGTGTATTCCCCCTGCGACCTGAGCTGCTGTCCT Gene GeneID:618583|GSDMA:NM_001078090:231_cdna Constitutive 0 NULL GeneID:618583 19 GENE GSDMA GSDM1 MGC155094 gasdermin A EMBV3_24798 GAACTCAGTTGGGCCGACCGCAACCACCTACAGATGCACTTTCGCTGCCAGTGCTACTTA Gene GeneID:281838|HYAL2:NM_174347:40_cdna Constitutive 0 NULL GeneID:281838 22 GENE HYAL2 MGC126904 hyaluronoglucosaminidase 2 EMBV3_39022 CTGAGGCATGTAATAACCTCTTGGGATTATTTTCTGGGGTATGTTAGTTGGTACCTGGTA Gene BVV0102_218134 - 0 NULL GK000021.2:49766966-50310195 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_29155 TGGACTTCTTTGAGGAGCTCTGGGACTCCTGCCTACCGAAGGGCACCGAGAGTCGCTTGT Gene GeneID:509087|DKFZP761E198:XM_002699350:235_cdna Constitutive 0 NULL GeneID:509087 29 GENE DKFZP761E198 NULL hypothetical protein LOC509087 EMBV3_25789 AAAAGGAGAGACACCTGTGGTTTTTCCCAGGAGAGGTGGGAGAATGAAAGCGTTTGATGC Gene GeneID:508104|TSPYL4:NM_001101064:13_cdna UTR3_Alt 1 NULL GeneID:508104 9 GENE TSPYL4 NULL TSPY-like 4 EMBV3_08272 GCCCACTGGCTCAGTACTTTTGCCATCGCTTAGCTCTGCCTTCTGCACGTTATCAGGTAA Gene BVV0102_273959 - 1 EMBV3_39826 GK000009.2:25692871-25873434 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236847 TCONS_00236848 1 XLOC_144586 Coding TCONS_00236847 XLOC_144586 Coding Coding NCOA7 9:25681082-25781387 j TSS177209 4929 1 TCONS_00236847_10 895 0.00730371272063299 15 0.951008932844154 7.70642112349966e-05 0.00012735990650355 3.35848819356924e-08 4.36771209170936e-05 1.85995698486374e-08 4.05448435956273e-09 1.39865323614072e-05 2.63672429367088e-09 5.13665968841273e-09 0.000102222876165876 0.000157833645552489 6.65677229825687e-05 1.74833760514205e-05 6.41361539408255e-06 2.897881759431e-06 0.000240891241622336 2.4830653896942e-22 0.000533951088267935 6.56880351405929e-09 9.11830824807789e-27 2.08885360907966e-07 1.22759784334679e-07 3.2928919060889e-05 0.000193798947516787 6.24809596179647e-09 1.31853806696799e-08 6.09760711571375e-12 4.10094595803495e-05 3.37462672708344e-05 2.18558119202053e-08 XM_005199357.1 NCOA7 PREDICTED: Bos taurus nuclear receptor coactivator 7 (NCOA7), 0.0 8561 100.00 0.962872793670116 NM_001122842.2 NCOA7 Homo sapiens nuclear receptor coactivator 7 (NCOA7), transcript 0.0 4672 85.75 0.804828565631974 TCONS_00236847_10 sp|Q8NI08|NCOA7_HUMAN NCOA7_HUMAN Nuclear receptor coactivator 7; 0.0 1552 87.03 0.998882681564246 0 coding 0 0 0 0 0.0520217605303459 0.754272469957629 0.00804082183726768 0.859586993292803 AGGAGAGTTGACTACAGAGGGAGATTTGACTGCAGAGAAGAATGTGGTGTGACAGTGAAACCATATACCGCACTGTTGGCTTTGAAGATGGAAGAAAGCAGCTCTTGCTGCTGGAAAAGGCAAGGGAAGAGAGTCTGCAGGGAGTGTGTGACTGATTTTGGACTTCTGACCTCCGGAACTATTGAAAAAGAAAAAGCAAGCCAAACAAAATGCAGAGACAGCCTCAGCTATGGCTGCAAGGACTCATTCTGGAAAAGAAGATGCCAGTAAAGTCATTTTAGAGCAAGACAAGTGCAACATTGCTGTGGAAGAGGAGTACATTACTGATGAGAAAAAGAAGAGAAAAAGTAATCAGTTAAAGGAGATCAGGCGTACAGAACTAAAGAGATATTATAGTATTGATGACAATCCAAACAAAACACATGATAAAAAAGAGAAGAAGATGGTGGTTCAGAAGCCCCATGGTACTATGGAATACACTGCTGGAAGCCAGGACACCCTAAACTCCATAGCACTGAAATTTAACATCACTCCCAATAAATTAGTGGAACTGAATAAGCTTTTCACGCATACTATTGTTCCAGGCCAGGTTCTCTTTGTGCCAGATGCCAACTTTCCCTCGAGTACCTTAAGGTTATCATCATCCAGCCCTGGTGCTACTGTCTCTCCTTCATCATCAGATGCAGAATACGATAAACTGCCTGATGCTGACTTAGCAAGAAAGGCCTTAAAACCCATCGAGAGAGTCTTATCATCCACTTCGGAAGAGGATGAGCCAGGAGTGGTAAAATTTTTGAAAATGAATTGCCGGTACTTCACTGATGGAAAGGGTGTGGTCGGAGGCGTCATGATTGTCACTCCTAACAACATCATGTTCGACCCTCACAAGTCCGATCCCCTGGTCATTGAAAATGGGTGTGAGGAATACGGCCTCATCTGCCCCATGGAAGAGGTTGTTTCCATCGCCCTCTACAATGATATCTCCCACATGAAGATCAAAGATGCCTTGCCATCGCCTGGAGAATGGGAAGACCTGGCTTCAGAAAAGGATATCAACCCATTCAGTAAGTTCAAATCTCTCAACAAAGAAAAACGGCAGCAGATCGGAGAGAGAACCATCACTTCGGATTCCACATCGACAGGACCTTCAGAGAAGTCGACGGAATACATAGAAACAAAGCCCTCAGACAGCTCTGTGTCCGACAGGGTAAAGAAACTGGAATCCTCTGCAGAGGCAACCCAGCAATCTACCCCAGTAGCTAACGTCAGCAAGGAGCCTTCTGACACTGCGTTTGAATCTATAGCCAAAGAAAATTCTCTTTTAGGGGAAGATGATGACTTCGTTGACTTGGAAGAGCTTTCTTCTCAAACTAAAGGTGGAATGGACAAAAGAGACACCTCAAAGGAGTGCCTTTCTCTTGACCCAGAGGAACTAAGGAAGACTAAATCACGAGTAAGCAGTTCTACTACGGAAATTCAGTCAGCCCTGAACTTTTCGGGAACAGAGTGTGATGCTGAACTGAAGGGAGCCCTAGACTTAAAAACCTGTGAGAAACAAGATATAATGCCAGAGGTGGACAAGCAGTCTGGGTCCCCAGAAAGCCAGGTGGAAAACACGCTGAACATACATGAAGATCTAGATAAAGTCAAACTCATTGAATATTACCTTAATAAGAACAAAGAAGGGTCACAGTTACCTGATAACGTGCAGAAGGCAGAGCTAAGCGATGGCAAAAGTACTGAGCCAGTGGGCATAGACATTACCCTTAGTAGTTCTCTTCCCCAGACAGGTGATCCCCCGACTGAGGGCAAGGAAGAGCCAGATAAAACCTGGGCGAAAGCGAGAGCACCCCTTCCGTTGCAACTGAGCTCCTCTACAGAAGAAAGTATGAATAAAGAGTATCCACACTCCTCTTTGGAATCTACTCTGGACAACAGCTGCCAAGGTGCACAAATGGATAATAAATCTGAAATTCAGTTATGGCTATTAAAGAAAATTCAGGTACCCATTGAAGATATACTTCCTTCAAAAGAAGAGAAAAGCAAAACTCCACCCATGTTTCTATGCATTAAAGTGGGAAAACCGATGAGGAAATCCTTTGCCACTCACACAACAGCCATGGTTCAGCAGTATGGCAAACGAAGAAAGCAACCGGAGTACTGGTTTGCGGTTCCTCGGGAGAGGGTGGATCACTTGTATACGTTCTTTGTCCAATGGTCTCCTGACGTCTATGGGAAAGATGCCAAAGAGCAAGGCTTTGTGGTGGTGGAGAAAGAAGAACTGAATATGATTGACAACTTCTTCAGTGAGCCAACCACCAAGAGCTGGGAGATCATCACGGTCGAGGAGGCAAAACGCAGGAAGAGCACGTGCAGCTACTACGAAGATGAGGACGAGGCCGCCCTGCCGACCCTGCAGCCCCACAGCGCACTTCTGGAGAACATGCACATCGAGCAGCTGGCCCGACGCCTTCCAGCAAGGGTGCAGGGCTATCCATGGAGACTCGCGTACAGCACACTAGAGCATGGGACCAGCTTGAAAACTCTCTACCGGAAGTCAGCAGCACTAGACAGTCCTGTACTATTGGTCATCAAAGACATGGATAATCAGATCTTTGGAGCATATGCGACTCATCCTTTCAAGTTCAGTGATCACTATTATGGCACAGGCGAAACTTTTCTCTACACATTTAGCCCCCATTTCAAGGTCTTTAAGTGGAGTGGAGAAAACTCATACTTTATCAATGGAGACATAAGTTCTTTGGAACTTGGTGGTGGAGGGGGACGATTTGGCTTATGGTTAGATGCCGACTTATACCATGGACGAAGCAACTCCTGCAGCACTTTTAATAATGATATTCTTTCCAAAAAGGAAGACTTCATAGTTCAAGACCTCGAGGTATGGACATTCGAGTGAAATTTAGACTGCCTTAAAATAGAACATTTAAAAAGACTGGGTTCGGTCAGCCCTGCTAAAGCTAGCTGGAAGACGAAGCCCCAGCTCAGACTGCCTCATCCCATCATAGTGCTTTCTTTCTGCCATCATCTCAGAGCGCAATTACATTGCAGAGAGATTCTGAAAGGTACATGTGGAAGGCAGACGATGAAGAAAGAAATTGAAGTTCGGATCGTTGAAAGACTTTATACTCTCACTTTCTTCAAACCCATAGAGTGAGGAGTCAGAATATTTATAGATGTGAGTTGAATGCAATTTTTATTTTTGGTAACTGTGAAAAAGAAAATACTGTAGAAGTATATACATTCCTTGTATATTTATCAACATAATTTTCATTACCAAAATGTACAGCATACTATTGTTTGCCATTGAAAAGTTTAGTCTCATTTAGAAAAATTGAAAGTGCACAGCACTTAAAGGGAATAAATGATTTTTTAAAACTGTTTTATTTATTATTTCTAGTATATTATTTGAAATGTGTTGGCAATTTTTTTCTTTTAATGTGTCAAATCTTGAAGTAAAGAAATGTATACATTTTGTGCTGTTTTGGCAACAAATCCATTTGATTTATATAGTTTTATATTAAATTTTTTTTGCCCTGATTGTTTAGGGTGATCTGTATATGTATGTGCTGCTTAATGTCCATATATATACACACACATATATATATACACAAACACAATTCTGAATTTTTAAAAACTCATAATCAATGTTTATTGATTTGACTGTTGTAGGCCATCTTTCCATTTTGTCATTGAAAAGGTACATTTTTAGTTATTTACCCTGAACATAATTGTGTAAAGAAGAATAAGCCATTTCTCACAGTCATAAATTGATATTTACAGTAATGTATACTTTTATGATCCTGGATTTAGAACCCTGCTGTTGAAAAGAAATGTTTTGCTTCTTATAAAATCTCTTGTGTTAGTAACAGAAATTGTATTTTTATTGGATTTTTTGCATAATTTTCCCCAAGTTTTTACATTAACAGGCCTCTGTTTTAAATGAGACTGAATGTTTTAATTTCTGTATATTTTATATCAAATGAAAAGTGTCCATTATCCCAATTGTCTTGGTTTCTACACTCTTTTATTTGAAAAAAATTAAATGCAAAGAAATGCATTTATACCACAATTGGAATAAAAAGTAAAAAGCAGTTTTTAAATATCAACTCACTTTCATATCATTAAACATTCTTTTATGAAAGTTAATAATAAAACCTTGTTAAAATTTTAACAAATATTATTGATTGTCAAACTTTTACAAAAGCCAAAGACTGCTAATGGAAAAAAATGTCAAGTAATAGCCAAAGCTGAGAAAGTTGTCTGTCATCAATTACATTTCCAGTGATCTTTGAAAGGAAAAATTAATAGAAAGTAGTAGTTGATAGACCTGCATTTTAAACATGTAAACAGTGCTTAGAATGTTGGCTTTAAGCTGGCGGAATACTTCCTCTAGCTTATTCTCTTACTTTAGACTATTTATAAAAGAGAACAAACAAATTGCTATGTGGCCTCCTGTCAGATCAACCATTATTTTACTCCACTCACATCCCATACAAGTTTCTTTGAATGCTATAAAATCTTAAATCTGTAGCCTGGGTGTACTTTCACCCAAGTTCTATTGCAAACTCGTCATTAACAACTTATCGGCAGTTGAACCTTATTAATCTGCTTGTTATATAATGTGCCTGTGTGAGATTCCAGGAATGTCTCAGTATGATCACATTTACCATTTATGCCATTTGCAACCATATGCTATTAACAAAATGGTCATTTTGCATATAGTTCACTCTTACCTAGTTTAGTCCATGATATTATACTTGTGAGAGCATATTCAGATGCTGTGTTCTCTATTTAAAACAGTATTGTCCAATCAGACATGCGTGGCCCTTCATTTATGGATACTGAGTGTATGTAATGCAGTGCTAGCCCAATATTTTCAATAAAGGAATTCATGCATTCAATGTGATT EMBV3_05298 TGTTTATTCTGCTCTGTCTTCTGGGGACTCATCTTCTAGGGCTGCATTTTCAGCACCCGC Gene GeneID:510120|MCM2:XM_002707782:114_cdna Constitutive 0 NULL GeneID:510120 22 GENE MCM2 MCM7 similar to KIAA0030 EMBV3_39002 GTCGGACTACACTAAGGCCTGGGAAGAGTATTACAAAAAGATCGGCCAGCAGCCCCAGCA Gene GeneID:505564|LOC505564:XR_084708:205_cdna Constitutive 0 NULL GeneID:505564 7 PSEUDO LOC505564 NULL similar to KH-type splicing regulatory protein (FUSE binding protein 2) EMBV3_37737 TTAATTACCCAACCTGGCATGGGTCTCTGTTGCAAAGAGGTGCATGGGAAAGGGCTGTTG Gene GeneID:407231|MEF2A:NM_001083638:14_cdna Constitutive 2 NULL GeneID:407231 21 GENE MEF2A NULL myocyte enhancer factor 2A EMBV3_26752 TTTTTCCTCCAGTTTCACTTCAAGATGGAGAAGCCGCCAGCCCCACCAAGCCTTCCCGCT Gene GeneID:789082|SF3A2:NM_001099211:75_cdna Constitutive 0 NULL GeneID:789082 7 GENE SF3A2 MGC138049 splicing factor 3a, subunit 2, 66kDa EMBV3_05024 GAAGAGGACTCAGAGGATGATGAGGACATGCAGGACCTGATCTTCTTGGTCCCTCCCAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_08989 CCTGCTTCTCCTGCATTACAGATGGATTCTTTATCACTAAGCCTCCAGGGAAGCCTGTCT Gene GeneID:512603|NAT1:NM_001075572:2_cdna Constitutive 1 NULL GeneID:512603 27 GENE NAT1 NULL N-acetyltransferase 1 (arylamine N-acetyltransferase) EMBV3_08375 GCCGCAGCCCTCTCTTCAGTTGACTCACTGTTTCCTACCTGAAAAAATAATTGTAGATGG Gene GeneID:280977|ACP1:NM_173978:8_cdna Constitutive 5 NULL GeneID:280977 Un GENE ACP1 MGC128334 acid phosphatase 1, soluble EMBV3_37915 TCTTAAAGAACAACCCAGAAACGAACAAATATGACGGCTGGCCAGAGCTGCTGGAGCTGG Gene GeneID:514459|LOC514459:XM_002696988:355_cdna Constitutive 0 NULL GeneID:514459 22 GENE LOC514459 NULL similar to family with sequence similarity 3, member D EMBV3_06095 CTTCTCCCAGAAGCAGAGAAAACTCAAGTGGGCTCTACAGCAGCGCCTTCCTCATTAGAA Gene BVT0102_023564 + 0 NULL GK000014.2:67197631-67463875 14 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00053734 1 XLOC_031814 Coding TCONS_00053734 XLOC_031814 Coding Coding VPS13B 14:66648221-67459619 j TSS39584 13491 1 TCONS_00053734_14 3992 62 0.983449532103274 3.46328969023944e-30 2.6021010933917e-13 0.000146906838390827 2.30281332375472e-05 6.35467039488088e-23 1.22364627418197e-22 8.73980128703338e-05 7.50106435667858e-09 0.000431866060162033 1.32709956791319e-14 1.3152288482569e-12 1.75347287504793e-28 4.67352646464168e-09 7.60415588447233e-34 2.79293664924072e-05 1.22952198791449e-08 1.04763689069937e-09 1.36690581704937e-12 1.99605750816009e-13 0.000284449106890508 2.75706409011117e-73 7.518142819698e-20 1.14725387232162e-11 3.6977914769595e-09 2.84521003633565e-23 0.000388241352169614 0.000106084856422014 1.84952118093039e-13 4.51157833800455e-15 1.10618609742393e-11 XM_002692791.3 VPS13B PREDICTED: Bos taurus vacuolar protein sorting 13 homolog B (yeast) (VPS13B), transcript variant X2, mRNA. 0.0 2.386e+04 100.00 0.980431398710251 NM_152564.4 VPS13B Homo sapiens vacuolar protein sorting 13 homolog B (yeast) (VPS13B), transcript variant 1, mRNA. 0.0 1.632e+04 90.03 0.892669186865318 TCONS_00053734_14 sp|Q7Z7G8|VP13B_HUMAN VP13B_HUMAN Vacuolar protein sorting-associated protein 13B; 0.0 7482 89.76 0.999749498997996 0 coding 0 0 0 0 -0.0191386816027715 0.922118437732702 -0.0639725754827262 0.41950071625968 TCGCCGGGCGGGTTGAGGGGAGTTGTTCTAATGAGGAAGGCGCTGCTGTAGAGCCCACTTGAGTTTTCTCTGCTTCTGGGAGAAGCTTCTGACTTTGTGACTCCTGTGTACCTTAAAAGATGCTGGAGTCGTATGTGACTCCCATTTTAATGAGCTATGTGAATCGCTACATCAAGAACTTAAAGCCGTCAGATCTACAGCTTTCGCTATGGGGTGGAGACGTGGTTCTCAGCAAGCTGGAGTTAAAATTGGATGTGCTGGAGCAGGAATTGAAATTACCATTCACTTTTTTAAGTGGACATATTCATGAACTGAGGATCCATGTACCATGGACAAAACTGGGTTCAGAACCAGTGGTAATTACCATCAACACAATGGAATGCATTTTGAAACTTAAAGATGGAATACAGGTTGACCATGAAAGCTGTGGTTCTAATTCTACCAACCGTAGTACTACTGAGAACACAAAAACATCAGCAAAACCCCGAAGAATTCAACAGGCCACTCCCACAGATCCTGATTTGCCACCAGGCTATGTACAGAGTCTGATCAGACGAGTTGTAAATAATGTAAATATTGTTATAAATAATCTGATACTAAAATATGTTGAAGATGATATTGTCCTTTCAGTCAACATCACATCCGCAGAATGCTATACAGTAGGTGAATTGTGGGATCGTGCATTCATGGATATTTCTGCAACTGATCTGGTGTTGAGAAAGGTTATCAATTTTTCTGACTGTACAGTTTGTCTTGATAAACGAAATGCCAGTGGTAAAATAGAATTCTACCAGGATCCTTTATTGTACAAGTGTTCCTTCAGAACTCGTCTGCATTTTACTTATGATAACCTAAATTCTAAGATGCCATCTGTTATAAAAATTCATACCTTAGTAGAGAGTTTGAAACTTTCTATCACTGATCAGCAATTGCCTATGTTTATCCGTATAATGCAACTTGGAATTGCTCTTTACTATGGAGAAATAGGAAATTTTAAAGATGGAGAAACAGAAGATTCTACTTGTCACAATAAAGATGTGTTGGGAAATGTTACAGGTGCTGAAGATGAAACACGAATAGATATGCAGTATCCTGCTCAGTACAAAGGCCAAGAGCTGTATTCACAGCAAGAGGACGACCAGCCACAGGGATGGGTATCATGGGCCTGGTCATTTGTCCCTGCCATTGTGAATTATGACGATGCCGAGGAAAACTACCTTGGGAATGATCCTACATCAACTACACATCAACAAAAAACACAGACTTTGAAAGATCCTATTGTTTCTATAGGATTTTATTGTACAAAGGCAACTGTGACTTTCAAACTTACTGAAATGCAAGCCGAGAGTAGTTACTACAGCCCTCAAAAAGTAAAATCTAAAGAAGTATTGTGTTGGGAACAAGAAGGAACTACAGTTGAGGCCCTTATGATGGGAGAGCCTTTCTTTGATTGCCAGATTGGTTTTGTAGGTTGCAGAGCCATATGCCTTAAAGGAATTATGGGCGTTAAAGATTTTGAAGAGAATATCAATAGACGTGAAACCGAAGCCTGTTTCTTCCTTTGTGGTGAAAATCTGAGTATAAAAGGTTTGACATACCTCACAAATTCATTGTTTGATTACCGAAGCCCAGAAAATAATGGTACTCGTGCAGAATTTATCTTGGATGCAGCTACTCATAAGGAGACATACACTGAGATAGCTGGAATGCAAAGGTTCGGGGCATTTTACATGGATTACCTGTATACAATGGAGAACACCACTGGCAAAGGTTCTGCAAATCAACAAGACTTTTCTTCAGGGAAGAGTGAAGATTTGGGAACAGTTCAGGAAAAGTCTACCAAAAGCCTTGTTATAGGTCCTCTTGATTTTCGCTTGGATAGCAGTGCAGTACACAGAATTTTAAAAATGGTTGTTTGTGCCTTGGAACATGAATATGAACCATATAGTAGACTAAAACCAGATATTAAGGATGAAAGAGAAACAATGCTGAATCCTGAGGAAGTGGCATCTTTGGAGGAATATATTCCTACTCGACATACAAGTGTTACTCTCCTCAAATGCACCTTCACAATTTTCATGGCTGAATTCAATTTGCTGGATCATTTGCTACCTGTTATTATGGGGGAAAAGAACTCAAGTAACTTCATGAATACTACAAACTTCCAGTCTCTCCGGCCTTTGCCTTCTGTTCAGATATTGGTGGATAAAATTAATCTGGAACATTCTGTGCCGATGTATGCTGAACAGTTGGTGCATGTGGTCAGCAGCCTTACTCAGCCTTCTGATAATCTGCTTCATTATTGCTATGCACATTGCTACCTTAAGATATTTGGTTTCCAGGCAGGACTGACGTCTTTGGATTGTAGGGGATCTTACTGCTTACCTGTACCAATTGTTCCCTCTTTCAGCACTGCTCTTTATGGTAAACTTCTGAAACTACCCACATGCTGGACCAAAAGATCTCAGATTGCTATAACTGAAGGCATTTTTGAGCTTCCAAATCTCACAGTTCAAGCTACAAGAGCTCAGACACTTCTGCTTCAAGCAATATATCAAAGTTGGTCTCATAGTGGAAATGTCAGCTCTTTAGCAGTTAATGAAGCTTTGATGAATGAAGTTTTCCAGACTGTAGGTGTGAAATCTAAGAATCCCCTGCCAACTCTTGAGGGCTCAATCCAGAATGTTGAATTGAAGTACTGCAGCACATCATTGGTCAAATGTGCCTCTGGGACCGTGGGATCAATAAAAATTTGTGCCAAAGCCCCAGGTGACAGTGGAAAAGAGAAGTTGATTCCATTGCTTCAGGGTCCTTCTGACACTAAAGACCTTCATAGCAGCAAGTGGCTCAATGAGAGCAGAAAGCCAGAATCCCTTTTAGCTCCAGATTTGATAGCCTTCACAGTCCAGGTTCCACAGTGTATGGACTACTGCCACAGTTCCGGTGCCGTACTCCTTTGTAATGTCCAAGGACTAGCAGTTAATATTGACCCTATCTTATACACCTGGCTCATTTATCAACCTCAGAAGCGAAGCAGTAAACATATGCAGCAGCCTGTAATTGCTGTTCCTCTTGTTATGCCAATTAGCAGAAGGAAAGAGGATGAGGTGTCTGTTGGAAGTGCACCCTTGGCAAAGCAACAGTCATATCAGGCATCTGAGTATGCCAGCAGCCCTGTAAAAACAAAAACTGTAACAGAATCCAGACCATTGTCAGTTCCTGTTAAAGCCGTGCTGACCATAACTGAAGGCTGTAGAAGTCCTGAAGAAAGAATGAAAGAGTTCATTGGAGTAGTATGGAATGCGGTTAAGAGTCTAACACTGCAGCTTGAAGTACAGTCTTGTTGTGTGTTTATCCCAAATGATAGTTTGCCTTCTCCTAGTACAATTGTATCTGGTGACATTCCTGGAACAGTAAGAAGTTGGTACCATGGACAAACGAGCATGCCAGGAACGCTTGCCCTCTGTTTGCCTCAAATAAAGATTGTTAGTGCTGGCCACAAGTATATGGACCCTCTCCAGGAGATTCCGTTTGTCATCCCACGACCCATCCTTGAAGAAGGTGATGCTTTTCCTTGGACAATCAGCTTGCATCATTTCAGCATATATACCCTTTTTGGAAAACAAGTGACACTTTGCCTAGTGGAACCCATGGGTTGTACCTCTACACTAGCTGTTACATCCCAAAAATTGCTTGCTACAGTACCTGATATGAGGCATTCATTTGTTGTCTGTCTGCATGTTGACCTAGAGTCACTTGAGATAAAATGCTCAAACCCCCAGGTTCAGCTCTTATATGAGTTAACAGATATCATGAATAAAGTCTGGAATAAGATTCAGAAGAGAGGCAGTCTCAGTTCTTCTTCCGCTTACCCGGAGTCCGTGGTGGGGCCTTTCCCTAGCTCTCCAGTTAGAAGCAGTATAGGCACAGCTCCTCCAGATAATAGCACATGTAGCCCATCTGCTGACATTGGAACTACTACTGAGGGAGATTCTGTCCAAGCTGTTGATGATTCACCATTCTCAGATTCTGTTACCTTGGAACAGACTACAAGTAACATTGGTGGATCCAGTGGTCGTGTTAGTCTATGGATGCAGTGGGTGCTCCCCAAAATTACTGTAAAGCTCTTTGCTCCAGATCCTGACAATAAAGGCATAGAACTTTGTATGGTCAGTGAACTAGAAGATCTCAGTGCTTCAATAGATGTCCAGGATGTGTACACTAAAGTGAAATGTAAAGTAGAAAGTTTCAATATTGATCACTATAGAAGCAAGCCAGGGGAAGGTTGGCAGTCAGGACATTTTGAAGGAGTATTTCTACAGTGCAAAGAAAAACCTGTGACAACTGCAAAGCTTCTAGATGGCTCTCATCAGCAGCATGGATTTCTGTCTTTGACATACACAAAAGCTGTAACAAAAAATGTTCGCCACAAGTTAACATCAAGAAATGAGCGAAGAAGTTTTCATAAGTTATCTGAAGGTTTAACAGATGGTTCCCCTCATTTTCTTCATGAAATACTTCTTTCAGCACAAGCCTTTGATATTGTCCTTTGTTTTCCTTTACTTAATGCCATTGCAAGTATATTTCAAGCAAAACTACCAAGGACCCAAAAAGAGAAAAGAAAATCTCCTGGTCAGCCCATGAGGACCCATACACTGACTTCACGCAATTTACCTTTGATTTATATCAACACAAGCGTAATCAGAATTTTTGTTCCAAAAACAGAAGAAATGCAGCCAAGTATTGAAGTTAATCAGACAGCAAAGGAAGATACCATGGTTCTGAAGATTGGCTCTGTTGCTATGGCTCCCCAGGCTGACAATCCCCTTGGCAGATCCGTCCTCAGGAAAGATATTTACCAAAGAGCCTTGAATTTAGGAATTCTTCGAGACCCTGGGTCAGAGATTGAAGACCGACAATACCAAATAGATCTGCAGTCGATCAATATTGGTACTGCTCAGTGGGATCAACTGAAACCAGAAAAGGAAAATGGCACAGGAGGAGTGCTAACAGAGACTGAAAGAAATTCACAGAATCCAGCCCTTGAGTGGAATATGGCCAGCAGCATACGGCGGCATCAAGAAAGAAGAGCAATTTTGACTCCCATTTTAACAGATTTTTCTGTACGAATAACTGGAGCACCTGCCATCATTTTCACCAAAATAATTTCTCCGGAAAATGTGCACACTGAGGAGATTTTAGTGTGTGGCCATTCCTTGGAAGTGAATATAACCACAAACCTGGACTTCTTCCTAAGTGTGGCTCAAGTTCAACTCTTACATCAGTTAATAGTAGCAAATATGACTGGCCTGGAACCATCAAACAAAGCCACAGAGATCACTAAGCAAGAACAGAAAAAAATGGATACATATGATGGAAGCATGGCTGAGAGCTCATCTCGGTACAGTGGTGCCCAGGATAGTGGAATCGGCAGTGACAGCGTTAAAATCAGAATAGTACAGATAGAGCAGCACAGCGGTGCCAGTCAGCACCGCATCGCCCGTCCCTCACGCCAGTCGTCAATTGTAAAAAATCTAAATTTTATTCCTTTTGACATATTTATTACTGCAAGTAGAATCTCACTAATGACCTATTCCTGTACGGCCTTACCCAAATCGAAATCACAAGAACAAAAGGATAATGAAAAAACAGGCAAGAGTTCATTAAACCTGCCAGAAGTCGATTCAGATGTCGCAAAGCCCAGCCAGGCGTGTATTTCCATGGTAACAGCAGAAGATCTCTTAAGCAGCAACATATCTTTTCCTTCAGGGAAAAAAATAGGGGTCATCTCTCTCGAAAGTCTGCATGCATCCACAAGGTCATCTGCTAGACAAGCCCTCGGCATGACCGTCGTTCGGCAGCCTGGAAGAAGAGGAACCGGTGACCTGCGACTAGAACCTTTCTTGTACTTTATTGTATCCCAGCCTTCTTTGCTTCTGAGTTGTCACCACAGGAAGCAACGGGTGGAAATATCCATTTTTGATGCTGTGCTTAAAGGGGTTGCCTCTGATTACAAATGTACAGATCCTGGGAAGACTTTGCCTGAAGCCCTGGATTATTGCACAGTTTGGCTGCAGACGGTACCTGGAGAAATAGACAGCAAAAGTGGTATTCCACCTTCACTCGTAACGCTGCAAATTAAAGATTTTCTTAATGGACCAGCAGACATCAACTTGGATATATCAAAGCCTTTGAAAGCAAACCTGAGTTTTACCAAGTTGGATCAAATAAACCATTTTTTGAAGAAGATAAAAAATGTAGACAGCAAAGCATCCTCAGCACCGTCAGACACTGTGCTGAGTAAGGATGCGCTTCCAGCCTCCAAATGTTACCGTGGGAAGTTATCCAAGCTTAAAGTTCATGGTGATGGAGCACAAAAGATTCCATTTCAAGAAAACATATGGAGAACGATTTCCTGCTTTCAAAAAATTTCTGTTCATACTACTCAGATTGTGGTCTCCGTGGAAACTGTCCCCCATCCTAATAAACCATGCCTGTTGGCATCTTTATCCACCCTCAGTGGAAGCCTTAATGTCAAAGCAGCGCAGAAAGTACCTGGTGTGATTCTTGGGTCATCTTTTCTACTCAGCGTAAATGATTTTCTCCTTAAAACGTGTCTCAAAGAAAGAAGTCGGATTCTAATAGGACCGTGTTGTGCTACTGCCAATTTGGAAGCTAAGTGGTGTAAACACAGTGGCGATCCAGGCCCAGAACAGTCCATACCAAAAATATCCATTGATTTAAGAGGAGGTCTGCTACAGGTTTTCTGGGGTCAAGAACATTTGAATTGCTTAATTCTTCTACATGAATTACTCAGTGGATACCTTAACGAGGAAGGAAATTTTGAAGCGAAAGTTTCTGAAGCAGTTCCACAAATGCCATCTCCTTTGGAAAAAAATCAGATATTTAAAAGTGAACAAAGTTCAGATGACCTACGGACAGGTCTATTTCAGTATATACGGGATGCTGAACCTTTGAAAATGCCTGGTGTCTATGAAGTCTTGTTTTACAATGAAACCGAAGATAGCCCAGGGATGATGCTATGGAGATACCCAGAACCTAGAGTGCTCACCCTTGTACGCATAACTCCTGTGCCCTTCAACACCACCGAGGATCCAGACATTAGCACAGCAGACCTTGGTGACATGCTGCAGATTCCTTGTAGTTTGGAATACTGGGATGAACTCCAGAAGGTTTTTGTTACATTTCGAGAATTTAGTCTGTCTGAAAGCAAAGTTTGTGAACTGCAATTGCCAGATATCAATCTTGTGAACGACCAGAAGAAACTGGTATCCTCGGATCTTTGGAGAATTGTCTTGAACAGCAGCCAAAATGGAGCTGATGACCAAAGCTCTGCAAGTGAATCTGGTTCTCAAAGCACTTGTGACCAACTTGTAACTCCAACAGCCCTGGCTGCCTGTACGAGAGTTGACTCCTGTTTTACCCCATGGTTTGTCCCATCTCTTTGCATTTCCTTCCAGTTTGCTCACCTGGAGTTCCATCTTTGTCATCACCTTGATCAGCTTGGCACAGCTCCACCAAAATACCTACAGCCATTTATTTCTGATAAAAATGTGCCATCTGAACTAGAATACATGGTTATTTCCTTCAAAGAACCACACATGTATCTTCGACAGTGGAACAATAGTTCTGTCTGTCAGGAGATCCAGTTCTCAGCTCAAGCAGACTGTAAACTTCTAGAGTGTAGAAATGTGACAATGCAAAGCTTGGTGAAACCCTTCAGCATCTTTGGACAGACTGCAATTTCCAGCAATGCAGTAGAAAAGCTGATTGATTGCTCCATCATCATTGACTCAATATTTGTAAACTTTGGGCAACATGTAGTTCATTCTCTCAACACTGCAGTACAAGCTTGGCAACAGAACAAATGCCCTGAGGTAGAGGAGTTGGTCTTCAGCCATTTTGTGATCTGTAATGACACACAGGAGACACTGCGGTTTGGCCAGGTGGATACTGATGAAAATATCCTGCTGGCCAGTCTCTGCAGTCACCAGTACAGCTGGCGCTCTCACAAATCCCCACAGCTGTTACACATCTGTATTGAAGGTTGGGGCAACTGGCGTTGGTCAGAGCCCTTCAGTGTGGACCATGCGGGGACATTTATTAGAACTATTCAGTACAAGGGTCGAACTGCTTCACTCATCATCAAGGCTCAGCAAGTCAGCGGCGTGCAGAAACAGATTATCATCTGTGGAAGACAGATCATCTGTAGTTACTTGTCTCAAAGCATAGAATTAAAAGTGGTTCAGCATTACATTGGTCAAGATGGACAAGCTGTGGTTCGGGAACACTTTGACTGCCTCACAGCCAAACAGAAATTGCCTTCGTACATACTAGAAAACAGCGAACTGACTGAGTTGTGTGTGAGGGCCAAAGGAGATGAAGACTGGTCGAGAGACGTGTGCCTGGAATCCAAGGCCCCTGAGTATAGCGTCGTCATTCAGGTGCCATCTTCAAACAGTTCCATTATTTATGTCTGGTGCACAGTTTTGACTTTAGAACCCAGCTCTCAAGTGCAGCAGCGAATGATTGTGTTCAGCCCTCTTTTTATCATGAGGAGTCATCTTCCAGACCCCATTATCATACATTTGGAGAAAAGGAGTCTGGGATTGAGTGAAACACAAATTATTCCAGGAAAAGGACAGGAAAAACCACTGCAAAACATAGAACCTGACCTTGTACATCACCTAACATTTCAAGCAAGAGAAGAGGATGACCCTTCACACTGTGCTGTTCCCATCTCAACATCCCTCATTAAGCAGATAGCTACTAAGATACACCCCGGAGGCACAGTTACTCAGATCCTTGATGAGTTCTACGGGCCAGAGAAGTTCCTTCAACCCACATGGCCCTATAATAAAAAGGACTCTGACAGGAATGAGCAACTGAGCCAGTGGGACAGCCCAATGCGAGTGAAGCTGTCAGCCTGGAAACCATATGTGAGGACCTTATTGATAGAATTGCTACCCTGGGCCCTGCTTATCAATCAGTCCAAGTGGGACCTCTGGCTATTTGAGGGAGAGAAGATTGTTCTACAGGTTCCTGCTGGCAAAATTATTATCCCTCCTAATTTTCAGGAAGCTTTTCAAATTGGAATATACTGGGCAAATACAAACACTGTGCACAAGTCGGCGGCTGTTAAGCTGGTCCATAACCTGACGTCTCCAAAGTGGAAAGAGGGAGGTAACGGTGAAGTTGTATCTTTGGACGAAGAAGGGTTTGTTCATGCTGAAATAAGACTCGGTGCTTTCCCAGGACATCAGAAGTTGTGCCAGTTCTGCATTTCCTCCATGGTACAGCAAGGCATACAGATCATTCAGATTGAAGATAAGACCACGATAATCAATAACACACCATATCAGATATTTTATAAGCCACAGTTAACTGTCACCAAACCCCACTCTGGAAAGGAGTATTTTCACGTTCCAGACAGTGCTACTTTCAGCATTTGCCCGGGTGGCGAGCAGCCTGCCGTGAGAGCCAGCTCCCTTCCTTGCTGGGACCTAATGCCCGACCTCGGCCAGTCCACGCTGGACGCGTCCCTGCTGCAGAAGCAGGTCTTGCTGGCCTTTTCTCCCACCGCCGTTGCCGACAGCGCCCAGTGCTGGAGCCTGCCAGCCCTAGTCAGACAGGAGCTTCCCAGACAGAGCGTGGCAGTGCCCTTGGGGAACTACAGGGAAGATGGCTTCTGTACCAGGGCAATAGCACTAACATATCAAGAACACCTTGGAGTGACTTATTTAACCCTCTCAGAAGACCCTAGTCCTCGAATAATTTTCCACAACAGATGTCCAGTGACAATACTTATAAAGGAAAATACTAAAGATATTCCAAAGTTTGAGGTTTATTGCAGAAAAATTCCTCCTGAGTGCTCAATTCATCATGAGCTATATCATCAGATTTCCAGTTATCCAGACTGCAAGACCAGAGACCTCCTTCCTAGCCTCCTTTTGAGAGTGGAATTGCTGGAGGAAATGACAACCGAGTGGAGTGATGCCATCGACATCAACAATCAGGGGACACAGGTTGTGTTTCTGACTGGCTTTGGCTATGTGTACGTGGACACCATCCATCACTGTGGCACAGTCTTCATCAACGTGGCCCCAGAAGGAAAAGCTGGGCCTGTCGTAACTAATACCAACAGAACTCTGGAGAAGATCGTGACATTTAAAATGTTCATCACTCAGTTGAGCCTGGCGGTGTTTGATGACCTCACTCACCACAGAGCATCATCCGAGCTTCTGAGACTCACACTGGACCACGTTTTCCTCCAGATGGCCCCCGTGGCTGGTCACCTCCCTGGGGAAGAGATGGCCGCCGCCCCCTTTCACGTCTACTCCGTGGAGGTCTGCTGCGGGGACCTGCAGCTGGACAACCAGCTGTACAACAAGTCCAATTTCCACTTCGCTGTCTTGGTCTGCCAGGGGGAGAAAACAGAATCTCCTCAGTGCTCCAAGATGCAGAGTCTCCTCGTATCCAGCGAAGATTTGGAAGAATACAAGAAAAACTGCTTTATCAAACTCTGCCTCACGTTAACCGAAGGCAAGGACGTCCTGTTTGATGTGAACGAGTTCAGTTTTGAATTGAAACCTGCCCGGTTATATGTGGAAGACACATTTGTCTACTACATCAAAACTCTGTTTGAGACCTACCTGCCCAGCAGCAGCCCGGGCGCTCAGCCCACAGCTCTCGCAGGCGGCAGACAGGTGCTGCCCGCGCAGGTGAGGCAGCACGCCCGGGCCTTGGTGCATCCCGTGAAGCTGCAGAAGCTGGTGATACAGCCCGTGAACCTCCTTGTCAGCATCCACGCGTCCCTCAAGCTGTACATCGCCTCTGACCACACTCCGCTCTCCTTCTCAGTGTTTGAAAGAGGCCCCATCTTCACCACGGCCAGGCAGCTCGTCCACGCCCTGGCCATTCACTACGCCGCAGGGGCCCTCTTCAGAGCAGGCTGGGTGGTTGGATCCCTGGAAATCCTTGGCAGCCCGGCGAGTCTGGTGCGAAGCATCGGGAACGGCATCGCCGACTTCTTCAGGCTTCCGTACGAGGGGCTGACCCGAGGCCCGGGAGCCTTCGTGAGCGGGGTTTCCAGAGGGACTACATCGTTTGTGAAGCACATTTCCAAAGGTACCCTCACGTCCATCACCAACCTGGCCACGAGCCTGGCCCGGAACATGGACCGGCTGTCGCTGGACGAGGAGCACTACAACCGGCAGGAAGAGTGGCGGCGGCAGCTCCCAGAGAGCCTGGGCGAGGGGCTCCGGCAGGGCCTGTCCCGGCTGGGCATCAGTCTGCTCGGTGCAATTGCTGGTATAGTTGATCAGCCAATGCAGAACTTCCAGAAAACATCGGAGGCTCAAGCTTCAGCAGGACACAAGGCCAAGGGTGTTATCTCTGGCGTGGGGAAAGGAATCATGGGGGTGTTCACGAAGCCCATCGGAGGGGCTGCTGAGCTGGTGTCACAGACTGGCTATGGTATTTTACACGGAGCTGGACTTTCTCAGCTTCCCAAACAGCGCTATCAGCCAAGTGATCTGCACTCTGACCAGGCTCCAAACAGCCACGTCAAATATGTCTGGAAGATGCTCCAGTCTCTGGGCAGACCGGAAGTGCACATGGCCCTGGAGGTTGTTCTGGTGAGGGGCTCAGGCCAGGAGCACGAGGGCTGCCTGCTGCTGACGTCAGACGTGCTCTTCGTGGTGAGCGTCAGCGAGGACACCCAGCAGCAGGCCTTCCCAGTCACGGAGATCGACTGCACACAGAACCGCGAGCAGAGCAGCTTGCTCATCGTGCAGCTCAAGCAGCCCAGAGTGGCCTGTGACGCAGAGGTGGATGGAGTTCGAGAGAGACTGTCAGAGCAACAGTATAACAGACTTGTGGACTACATCACAAAGACCTCTTGTCACCTGGGCCCCGGCTGCTCCTCCGTGCAGACGTCATGCCCTGTGGTGGCTGTGGAACCGCTCCCCTCCACTGTGAAAACATACCATTATATGGTTGATCCACATTTTGCCCAAGTTTTCATTAGTAAATTTACCATGGTGAAAAATAAAGCCCTGAGGAAAGGGTTCCCTTGAGTCCCCTCCAAGGTGTTGATTGCTGCTTGTGCCATTATTTTTGAAAAAGAAACCTAATGAGCTCTTAACATCTATTGTGGACACGAAACCACTGTTCAATTCAAACTCTTCCTTTTTCCTACAACTAAGATACTTCAAAATTGAGTGATTAAAAAACTTAGTCCTTTCCTGTTTGGTCTTATCGTGTATTGAAAATACATTCCTTTTTGCTCTTTTTGCTAAAATTTCGACTTTAATTAAGATTGTCAACTCTGTAGTCAAGCGTTGGAAACAGATGTAAACTTTATCTCCTGCTGCATCTCTTTTTAGGATGAGACATCATCTTTGCCTAACACCCTTCTCTGCAGAAGTTTAGCTTTAAATGAAATTCAATGCTTAAGATCTTACTGTTTAACTTGTTAATGTTATTTAAACGTGATGCTATTTTAAGTGAAAGCTGCCATGTACATTTCTACTCTAAACTTTTACTGAAATTTTACTGATGACTTATCCAGGTACATTTTGGAAAAATGTCTTTCTAATCTGTTTTGCTAGGCAAGCAAATCTTTTTTTGTCTACTGCTAAAAACAGATCCAGGGTGCTCAGGTGAGTTTCTTTAGTTCCATAAGCAACACACTACTGGGGAACTCCCACTACTGGATACTTTTATGGACGGACTCACCCTGATGCCTTAGCCAAGTCAAGGACCCTAACACTAACCTTAACAATAGTTCATTTTGATGACTTAGCATGATCCAGCATAAAGATATTACCATGATTTTTTGTTTTTAAAAAATGGATTTGGCTCAAGATCCTAGGTCACCACGTACACCTTGAGCATTCAGTAAAAATTTGATACTCCAACTAAAATACATTTTTACTTATTACATCCAAACTTGGGCCTACAACCTGATACCTACAGTTGTGAGATGCTAAGGAATTTCAGTTTCAAATGTCTGCTTTAACTTAAGCCTCACATGTTACTGGGCATAAGAAAGAGATCACTGCATCGTTGTTTACTGTTAATGGACACTTTAGGCTGAATATGAAAAAAATGGCTCCACCATTACTTTGCTATATCATACTCATTTAGGAAAGTGATAGTTTTGTCAACCACAAGAGTGACTATTTTTAAGCTTGTAAATATGTATTAAGTCTTGTATCTTTTATGATAAATTTGCATACTACTAATTGTTATATGAAATTGTTTAAAATAAAACAAATTCTTGAATTACTGATCATACATAAACGTGGGTTCTTAAAATGCAGGTTTCACTGATACCCAGGTTTATTACAGCTTACATTATTGGACTCAAGAATTCTGCACAAGAAAATTTGTTAACCTAATTAAAGAACTGGGGATTCAGTTAGTTTTCACTAAAATGACACAATTCTTAAAGCTCTTTTGATCACA EMBV3_12944 TCTGGAAACCTTAGCTGAACAGCTAGCTGATTAATTATCTGGGCTAGACCCTCGAGGATG Gene BVT0102_240438 + 0 NULL GK000010.2:26153339-26175322 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00020067 1 XLOC_010745 NonCoding TCONS_00020067 XLOC_010745 NonCoding NonCoding - 10:26155755-26157109 - TSS13957 1354 2 TCONS_00020067_2 67 0.115952732644018 1 0 0 0 0 0 0 2.93538446690631e-07 0 0 0 3.03877023246645e-06 1.69068242664129e-06 0 0 8.68536323119004e-07 0 0.000650210720086377 0 1.23539669292659e-05 0 0 0 8.49485669742759e-05 6.09797367872667e-05 7.42892808367741e-05 0 1.30086219842003e-06 0 0 3.58537899626436e-05 4.8843945462102e-05 XR_230801.1 LOC101903668 PREDICTED: Bos taurus uncharacterized LOC101903668 (LOC101903668), 0.0 1178 84.91 0.774741506646972 0 noncoding 0 0 0 0 0.00982268149207838 0.924350614273853 -0.0179950132083762 0.710983273617599 CAATTTTAGTTGAAAGGCATTGGTATACTACAAATATAACCATCAGGATAATTATCAGTGTCATAGCTCCAGATCCAATACTATGTATAATGCTTTGAAATCATCCTCGAGGGTCTAGCCCAGATAATTAATCAGCTAGCTGTTCAGCTAAGGTTTCCAGATTTTTGAAAGCGGGTAGACTGTTAGAGAAAGTTTCAAAGATTTCTTTTGGTAATAATTGTACATTTAAGGAAGCATTATCATGTAAGTCTTGCAAATGAAATTTGATATGTTCCCAATTGTAGGCACTATAGTTGAACCGAACAGGGGTCATACAAAATTGAGTAGAATTTCAGTTATATTTTAGTATAGCTTGTTTTTGCAAATCTATTAATTGATCTTCAACCTATTGGATGGCTATTTTTATTTCTTGTATTTCATCTTGAATTTCCTCATTTACCTGAGTCTGAATGGTCCACATAGTATGAGCATCTTTGGTCCAATTTTGAATAAAGTTGTGTGTTTGAATTGAGGTTTGTAAAGCAATGCCTGCAACAGCGGCAGTAGTGCAAATGGCCATTAATCCCCAAATGCCAAGAATTAACCATCCAATGAATTGTTTAGATCATCGAAGTGATTTAGTAAGTAGCTGGGAGGCAAATCCTGCCATGGGACCCTCTTCCCAGGGTCATTGGAGATCTATTGGCAACCATAGATTACGTCACAAATGAAGAATCAAAAGGGATTCATTTTTCAAAGAGACAGAGGAATTAAAACAAGCATATAATTTGCAATCTATACAAGGCACAAAACATAAAGTCTTATTAAACTGCAAGTTCCCTATAGCTATAACAAAAGGAAGGGGAACACAAGCTTGTATGAAATATGAATGATTATAATGAAAGGAATAGTTACTATGACTATGACTGGTCCCCATAAAATATCCAGTCCAAATTCCAAGTTCTTTGGTGCTTGTGGCAAGTTTCCAGATGTCCCATTGTTCAGGCCCAATCCGTTTATTGAGGATGATTCGAGGTCGAGGGGGTGCCATTCCACCGTCAAGCCACCCAAGGGTCCTTTGTTAATACAATGAAGTCCATTGTAGTATTAGTAACCTTTTATGCTACTTGAGTAGTATAATCATATACAGTGGTGTTAATATCATCTGAGCAGTTAGACAACTACATACCATGGGGTCCCCAATAATCAATGGTGTTCAGTTCAGTTCAGTTTAGTCACTCAGTCGTGTCTGACTCTTTGCAACCCTATGAATCACAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCGTCTCATCCTCTGTCA TCONS_00016507 TCONS_00016508 . 5' 2418 TCONS_00016507 TCONS_00016508 . 5' 2418 EMBV3_11255 GGATCAAACTGGACCACAAAGAAAAGGGCCCAAAGGAGTCCAACTCATCAGTCTCATCAC Gene BVT0102_163234 - 1 EMBV3_41526 GK000010.2:30159345-30328464 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05588 AGCGGTGGTCTCCTCATCTCCATGGTTTCCTGGCTGCTTCTCCCTTGATTAGCAACTGTT Gene BVT0101_013251 - 0 NULL GK000018.2:13299783-13341369 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00082319 TCONS_00082320 TCONS_00082318 1 XLOC_050972 NonCoding TCONS_00082320 XLOC_050972 NonCoding NonCoding - 18:13334832-13336180 - TSS62121 1348 1 TCONS_00082320_2 83 0.693620178041543 1 0 0 0 0 0 0 0 0 0 0 9.19593192787984e-05 1.8821423756511e-05 0.000111408532595085 0 0 0 0 1.6792625959738e-11 0.00439649132756705 1.148568329185e-06 0 0 0.000247723457005863 0 6.21825031115969e-05 0 0 0 2.64430955985707e-14 4.75768444605171e-05 2.649648015259e-05 XR_231032.1 LOC101902570 PREDICTED: Bos taurus uncharacterized LOC101902570 (LOC101902570), 4e-103 379 81.06 0.304896142433234 0 noncoding 1 0 1 1 -0.503665405400046 0.0195450492561043 -0.115682575335906 0.0622669529933067 AGGTTGGGACTTGAACCCGGCCAACACCCTGCTTGGGGCTGTAACTCACGTGGCTGGGACCTGATCCAGCCAAAACCCACGGTCTTCCAACTGAGATCACAGACCTGGTTTCAGGACCTACTGAAACTCCAGTTCTTGGTGTCTCACCTCAGAAAGGATTCAGTGAGAGACAAACTGATAACTAAGAAGTGGATTTATTCAAAGAGAAACACTTCACAGAGTGTGGGCTGTCACAGAGGGTGACAGAGGATGAGATGGTTGGATGGCATCACCGACTCAATGGACGTGAGTTTGAGTGAACTCCAGGAGTTGGTGATGGATAGGGAGGCCTGGCGTGCTGCAGGACACAACTGAGCCACTGAACTGAACTGGACTGAGGAGACCCATGAGCTGACAAAGCAAGAGACCTTATTGGGAAGGGGCACCTGGGCAGAGAGCAGTAGGGTAAGGGAACCCAGGAGAACTGCTGTGCCACGTGGCTCACAGTCTCGGGTTAAAGCCTGAGATGTGACGGATTCGTTTCTGGGCTGTCTTTGGCCAATCATTCTGATTCAGGGTCCTTCCTGGTGGCGCAAGCATTGCTCAGCCAAGACGGATGCCAGCGAGGATTTTGGGAGGTGGCTGGACACACGCTGTCACATTTTGACCTTCTCTTAACTCTTCTGGTTGGTGGTGGCTTGTTAGTTCCTTGTTCCTTCCTAAAATAACTGTCGTAAATAACTCATGCAAATGGTTACTGTGGTGCCTGGCCAGGGTGGGTGGTCTCAGTCAGTGTGTTTGCCCTATCAGCTCCACGTCCCACTGAGCTGCACTTGGTCACAGCTGAGGCCCCAGCTGACCCCACAGGAGCTCTGGGGCCGGGGAGGCTTTGGGCTTGTCCTGAAACTGAGCAGGGCCCCCTGGGGCTCCCAGCCGCAGAGGGCCTTTCGTCCCGTTTCTTGTAGGCAAGCCTCCGGCCTCCATGACCTTTCCTGAGTTCCAAAGGGCAGGTTCCAACAGTTGCTAATCAAGGGAGAAGCAGCCAGGAAACCATGGAGATGAGGAGACCACCGCTTGAGATGAGATCGAGGGCGTGCAGGCCCTGCCACACCCTAAGCTTGTCAGGGAGCCCACCTTTGTTATAAAACCCTCATCAAATCCTCTTGGGTCAGCACACATAGGTTTTTGGAGCAGGACCCCGCTGTGGTCCCCTTTGCCTGACAAAGCAATAAAGCTATCATTTTCTACTTCTCCCCAAATTCAGTCTCTGAGGTTTGATTCGGCACTGTACAGAGGGGGCTGCAATTTCGGTAACAGCTGGGGACACCCGGGGACATGTCCAGTTGTCACTGGATGCCAGGGTTAGCTC TCONS_00085471 TCONS_00085472 r 3' 5176 TCONS_00085471 TCONS_00085472 r 3' 6523 EMBV3_14417 CTCCTCGGAGAGAAAACACAGTGGCCGTTTAGGAGGACAAGGTGCAGGAAAGGGTGAAAA Gene GeneID:532029|GNA15:XM_002688944:32_cdna Constitutive 0 NULL GeneID:532029 7 GENE GNA15 NULL guanine nucleotide binding protein (G protein), alpha 15 (Gq class) EMBV3_26880 CAAGACTTTGGCATCACCAGATACTTCTGAATTTGAGACTCACCAGCCCCTGGGACACTG Gene BVV0102_370252 + 0 NULL GK000018.2:43863007-43928609 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_26613 TCCCAAATGGTGTTTAAAAACAAACAGGTTCAAGACACGCGAAGGACCTCGTTTCCTGGG Gene GeneID:281377|PARG:NM_174138:2_cdna Constitutive 0 NULL GeneID:281377 28 GENE PARG NULL poly (ADP-ribose) glycohydrolase EMBV3_08175 GCCTCTCAGTCATGATTTGGGACATGTTAGTTCTTGGCTGTGAATGAGGTAAGACGGGCC Gene GeneID:539329|FUT11:XM_002698914:115_cdna Constitutive 0 NULL GeneID:539329 28 GENE FUT11 NULL fucosyltransferase 11 (alpha (1,3) fucosyltransferase) EMBV3_09141 AGAAGAAGCCCTTTCAGCAGCACTGGAGGTAGCACACGCTCTCCAACGTTGACATCAAGA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07425 CCCGTGCCGAATTTGCAGAGAGAACAGTTGCAAAACTGGAAAAGACAATTGATGACCTGG Gene GeneID:535277|TPM4:NM_001101162:98_cdna UTR3_Alt 2 NULL GeneID:535277 7 GENE TPM4 NULL tropomyosin 4 EMBV3_37064 AGGAGCCTTGCAGGCTACATTCTGTGGGGTCACAAAGAGTCAGACACGGCTGAGAGACTT Gene BVT0102_364870 + 1 EMBV3_25989 GK000030.2:140284396-140370625 X NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23919 AGAGGCCTAGAATACTTCCCTTGACACTCTTCTCATTGTTGACTCTATCAGTGCTCACTC Gene BVT0101_021295 + 0 NULL GK000018.2:2954440-2962720 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_40745 GGAGGACATACAATAATATCCACCAGACCTTCCACCCCAGCGAGCGGTTCATTGCTGACA Gene GeneID:286849|CD40:NM_001105611:770_cdna Constitutive 1 NULL GeneID:286849 13 GENE CD40 MGC157138 TNFRSF5 CD40 molecule, TNF receptor superfamily member 5 EMBV3_41200 GCCACTTGAACTCATCTGTAGTCCTCCTTTATTCATGCCGAGTTCTGTCTCCAGTGCTGC Gene GeneID:540559|LANCL1:NM_001076227:41_cdna UTR3_Alt 2 NULL GeneID:540559 2 GENE LANCL1 MGC137731 LanC lantibiotic synthetase component C-like 1 (bacterial) EMBV3_33517 AAAACCAGAGAAGCCACCGCAGTGAGAAGCCCACGTACCACAACGAAGACTAGCTTTCCA Gene BVT0102_201423 - 1 EMBV3_39238 GK000013.2:36448898-36610251 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00048247 1 XLOC_028379 NonCoding TCONS_00048247 XLOC_028379 NonCoding NonCoding - 13:36457252-36458153 - TSS35423 901 1 TCONS_00048247_1 44 0.335183129855716 1 0 0 0 0 0 0 0 0 0 0 0 0 7.93715019848042e-06 0 6.2650318023252e-05 0 0.00023450903606153 0.000386956635268044 2.78478179596945e-05 0 0 0 0.000115304554173725 0.000132366971740068 0.000186067026761716 0 0 0 0 2.15520801011516e-05 8.67471362657412e-05 NM_001098936.1 RNF135 Bos taurus ring finger protein 135 (RNF135), mRNA. 1e-24 118 70.00 0.269700332963374 0 noncoding 0 0 0 0 -1.76471196513385 0.0495176276707776 -0.0416021726763625 0.550066308390436 ATCAAACGCACACCCCATGCAGTAGAAGCACAGAGTCTTAACCACTGAACCGCCAGGGAAGTCCCAGGCTTTACTTCAGATTACAGTAAAGCAGGCTGGATCCAAAAAGGAAGCACTCCATTTTACCAGGAAGTTACCCCAAAACAGCCAGTCATCCAGCCAGTAAGGGAGATAGCACCTCTTGGGGAGTAAGTGGAAGTGCTGTGGTGATGGTACACAGGCCTTACTGCTCCAGTTGATTGATCCGTGGTTTATCCAGCTCCTTCCTCAGTGTAAACTTTCCTCTGCTGACTTTGCAAAACAATATCAAACCTCAGGAGAAAGGTAAGCAACTTTTCAAACAGAAAAACTGATTCTTTGTTTTAAAAAACGTTCATTGTATCTACTTTTTACCAATTTTACTCTTTTTGTGAACAAATGGTTTTTAATTTTTTTTTAATGTTAGGAACTATATAAACTAGCAAAATTTCTCCCCCCAAAAAGCTTATCACTGCCTGTAAGGCTTCTCTTTCACCCTTCAGCTATTTGTCTTTGAATCAAAGCAGAGGGAAAGCCTAAAAGCGGTTTCTTGGGGCCCTTTTAGTCCGTTAAGTTTTGGAGAAATTACACCACTTTGGTATGTTTGGTAAAGCACAATTTGCCTATAAGACTGGTGAATTCTAGGACTTTCCCGGTGGTCCATTAGTGAAGAAGCCACCTGCCAATGCAGGAGACACAGGTTTGATCCCTGATCCAGGTACATCCCACATGCCTCAAAGCAGCTAAGTCCATGCACCACAACTGGGCTCTAGAGCCCAAAACCAGAGAAGCCACCGCAGTGAGAAGCCCACGTACCACAACGAAGACTAGCTTTCCACGGCTAGAGAAAGCCTGCTCAAAGCAGCAAAGACCCAGCTCAGCC TCONS_00045088 TCONS_00045091 . 5' 6064 TCONS_00045088 TCONS_00045091 . 5' 6064 EMBV3_11378 CCTTTTGCCTAAATTGCAGGGTGTGACCCATTCATCTTTTTGGAAGAAATTTTAGGCTCG Gene GeneID:100125265|GALNT4:NM_001103321:2_cdna UTR3_Alt 1 NULL GeneID:100125265 5 GENE GALNT4 MGC151803 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) EMBV3_04516 GGTGGTTGTCATTCCTCCGGATTGGTACTTGTGAGAGGCTTGTTCTGAATCCAGTAGGGA Gene BVT0102_396221 - 1 EMBV3_31044 GK000029.2:5474133-5494431 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00166059 1 XLOC_100897 Coding TCONS_00166059 XLOC_100897 Coding Coding - 29:5308619-5309627 - TSS124037 1008 2 TCONS_00166059_2 41 0.154761904761905 1 0 0 0 0 0 0 0 2.65165331333197e-05 0.000179944435155375 0.000139870213576539 3.69698347282516e-05 0 8.86826635415973e-06 1.03824604606499e-05 9.33332012506688e-06 3.65044387874625e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NM_001034503.2 NXPE4 Bos taurus neurexophilin and PC-esterase domain family, member 4 (NXPE4), mRNA. 8e-47 192 88.74 0.14781746031746 TCONS_00166059_2 sp|Q5VXH5|PRAM7_HUMAN PRAM7_HUMAN PRAME family member 7; 1e-08 50.4 63.41 0.975609756097561 0 noncoding GCCTGTCAGGCTCCTCTGTCCATGGGATTGTCCAGACAAGAATGCTAGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCATCCTGACCCAAGAATTGAACCGGGGCCTCCTGCATTGCAGGCAGATGATTTACCAACTGAGCTATGAGGGAAGCCTTCTCTTCTCTTACTAGTGGTTAGCTAATCTTGAAGGGTGCCATGTATCCCTAGTGAAGGGAGAGTTGTTAAAAAACATCAGTTCTTTCCAATGAACACGTTTCAGGTTTAATTTTGCCTCTCAGTGTAGTTTTGCCTGAACTCAAACATTTTAATTAGTGCTTTAACTTCAATCATTTAAAAATATCTTTTAAAGACATGTAACATGTGTATTTAAAATATCTCTTTGGAGTTTTGTTTCATGAGTTTCACCTACACAGTTCTGACACACATGGCATTCGTGTTAGGGGTAACTGAGGATGGAGGCTGCGTTGGTCCACATGACCTTCCTCGTACTGATTTAGGGCTCTAAATGACGCTCTGACGTCATTCCCTCATAAAGACTGGAGTGGGTTTTCAGAATTCCTGCTACCCACTTCCAGGTGGGACTTGGATTAATCCAAGCACCGTATGAACTGAATGGGCTGGTGGTTGCCCTTCCTCCGGATTGGTACTTGTGAGAGGCTTGTTCTGAATCCAGTAGGGAAAGAGCTATATCATTGTGCCCTTGAGGCCTGAATGGCATGTGGCCTAACAGGCACGTCCACCCCTGCCAGAGCAGTGCCTTAGTCCTGAGTAGATTCCTCTGAAGGGTTGGGAGATTGTCTTAGGTCTGCTCCTGCTTGGCCTGACATGGATGATATGCTCACTGGCATTTTCCACAGGATTCCTCCTGAAGCAGAGTCAGGATGAGTGTCCGGCACCCCCGTAGGCTCCTGGACCTGGAGAGAATGCACCTGCTCAGGGAAGATGCCTTGGTCTATTCTTATCTGGAGTTTCTGCCCAGGGAGCTCTTCCCACCCCTCTTCATGGA TCONS_00162933 . 3' 4319 TCONS_00162933 . 3' 5326 EMBV3_19765 CCGCTGTGACACCATATACCAGGGCTTTGCTGAGTGTCTCATCCGCTTGGGAGACGGCAT Gene GeneID:513171|EDC4:XM_002694902:964_cdna Constitutive 0 NULL GeneID:513171 18 GENE EDC4 NULL enhancer of mRNA decapping 4 EMBV3_26942 AATTCTGCAATCAGTTGCCGACCCATCCTCGTCACCCTTACGCCGGTGAGTTGGTGTTTA Gene GeneID:100299794|LOC100299794:XM_002683932:2_cdna Constitutive 0 NULL GeneID:100299794 Un GENE LOC100299794 NULL hypothetical protein LOC100299794 EMBV3_03887 GAATCCCTTCTTGTTGTTATGCAACACCTGGCAAAGAATGTGGTCATGGTGAACCGTGGG Gene GeneID:512293|LOC512293:XR_083650:79_cdna Constitutive 0 NULL GeneID:512293 4 PSEUDO LOC512293 NULL similar to Cyclin B1 EMBV3_24692 CTTTTTGAGGGAGACATCATACTTGATGAGAGATGAATGCCAGGGGGGTTATCCTCAAGG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35089 CCACTCCTGGAGGACTTTGGCAATAAAGCCCAGCCTGAATTTAAAGCTATGCCAGATGTG Gene GeneID:530147|BAMBI:NM_001046309:61_cdna UTR3_Alt 2 NULL GeneID:530147 13 GENE BAMBI MGC137853 BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) EMBV3_43426 AGCAGCCTGGGTCCTGAACAATGGGCAGTATGAAGAGGACGTGGAAGAGACTGAGCAAAA Gene GeneID:540692|RASAL2:XM_002694157:566_cdna Constitutive 0 NULL GeneID:540692 16 GENE RASAL2 NULL RAS protein activator like 2 EMBV3_02066 AGAAGGACCAGCTCATCACCAAGTGCAATGGAATCACATGTCTGACTTCCGGATCCAGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_05370 CGCCACCATGAGGGTCTTCCACCTGCTGCTGCTGGCTCTTGGCTTGCTTCTCTCCCAGCT Gene GeneID:768318|DEFB:NM_001078133:1_cdna Constitutive 0 NULL GeneID:768318 27 GENE DEFB MGC140061 defensin, beta EMBV3_37116 GCTGGCTTGCTCTAGCATTATCGTCAATCACATCTATGGGCTCTTTATCGTGGCCTGCAC Gene GeneID:504551|LOC504551:XM_002693242:505_cdna Constitutive 0 NULL GeneID:504551 15 GENE LOC504551 NULL similar to Olfactory receptor 51G1 EMBV3_28423 CTAGCCCCCTGATACTCCTGATAGGATAGCATGCAGAAGCATCAGCAGGAATTTTTGCCG Gene GeneID:613902|TTLL11:NM_001102272:207_cdna Constitutive 2 NULL GeneID:613902 11 GENE TTLL11 MGC159457 tubulin tyrosine ligase-like family, member 11 EMBV3_22669 GATTGTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCATCTTTGCCCTCTGT Gene BVT0102_406917 + 0 NULL GK000005.2:57823760-57830914 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00195203 TCONS_00195204 TCONS_00195202 1 XLOC_117952 Coding TCONS_00195202 XLOC_117952 Coding Coding GDF11 5:57827569-57837705 j TSS145489 3462 2 TCONS_00195202_1 263 4 0.658806117414899 1.9966093104323e-05 0.000560155068345006 9.35815525094847e-05 7.39274247701148e-19 4.31311809112324e-15 4.75395869331358e-10 6.75586184073743e-06 7.50444846374755e-83 3.51862732050775e-05 2.75526931857512e-05 4.5014731183118e-05 0.000407424820978268 0.00037237104802595 0.00174914218253876 1.05344260659349e-05 0.00130766824259384 1.99008601392278e-14 0.00206147207189359 1.0964448710658e-13 7.41800712908582e-14 7.99242724320691e-20 0.00158719094694148 6.06659090871495e-28 0.000330155872677352 0.000421581940745222 0.000237206839467397 3.99451208415374e-17 0.000426776132947533 8.51336198288438e-05 4.64239312613712e-15 XM_002687421.3 GDF11 PREDICTED: Bos taurus growth differentiation factor 11 (GDF11), 0.0 3608 99.95 0.578278451761987 NM_005811.3 GDF11 Homo sapiens growth differentiation factor 11 (GDF11), mRNA. 0.0 2264 85.06 0.578856152512998 TCONS_00195202_1 sp|O95390|GDF11_HUMAN GDF11_HUMAN Growth/differentiation factor 11; 0.0 561 99.62 0.996197718631179 2 coding 0 0 0 0 -0.477697112261746 0.352437705896342 0.0304553034883469 0.598421481815784 GCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGCCGGGGGGGAGCGCTCAAGCCGGCCGGCCCCGTCCGTGGCGCCCGAGCCCGACGGTTGCCCCGTGTGCGTGTGGCGGCAGCACAGCCGCGAGCTGCGCCTGGAGAGCATCAAGTCGCAGATCTTGAGCAAACTGCGGCTCAAGGAGGCGCCCAACATCAGCCGCGAGGTGGTGAAGCAGCTGCTGCCCAAGGCGCCGCCGCTGCAGCAGATCCTGGACCTGCACGACTTCCAGGGCGACGCGCTGCAGCCCGAGGACTTCCTGGAGGAGGACGAGTACCACGCCACCACCGAGACTGTCATTAGCATGGCCCAGGAGACCGACCCTGCGGTGCAGACAGATGGCAGCCCTCTTTGCTGCCATTTCCACTTCAGCCCCAAGGTGATGTTCACAAAGGTACTGAAGGCCCAGCTGTGGGTGTATCTCCGGCCTGTGCCCCGCCCAGCCACAGTCTACTTGCAGATCTTACGACTGAAACCACTAACTGGGGAAGGGACTGCAGGGGGAGGGGGCGGAGGCCGGCGTCACATCCGTATCCGCTCACTCAAAATTGACCTGCACTCACGTTCCGGCCACTGGCAAAGCATTGACTTCAAGCAAGTACTACACAGCTGGTTCCGCCAGCCACAGAGCAACTGGGGCATCGAGATCAACGCCTTCGATCCTAGTGGCACAGACCTGGCTGTCACGTCCCTGGGGCCGGGAGCTGAAGGGCTGCATCCTTTTATGGAGCTTCGAGTCCTAGAGAACACAAAACGGTCCCGGCGGAACCTGGGCCTGGACTGCGATGAACATTCAAGTGAGTCCCGCTGTTGCCGCTACCCCCTCACTGTGGACTTTGAGGCTTTTGGCTGGGACTGGATCATCGCTCCTAAACGCTACAAGGCCAACTACTGCTCCGGCCAGTGCGAGTACATGTTTATGCAAAAGTATCCGCACACCCACTTGGTGCAACAGGCTAACCCAAGAGGCTCTGCGGGGCCCTGCTGCACACCCACCAAGATGTCCCCAATCAACATGCTCTACTTCAATGACAAGCAGCAGATTATCTACGGCAAGATCCCTGGCATGGTGGTGGATCGCTGTGGCTGCTCCTAAGGCAGAGGTGTGGCCTGCTTATGCCCAAATTCCCCCCAGCCAAGAGAGAGACCAAAGAGCCTGCGGAATGCCTCTGCTCCCTGCCTCTATCTTCAGGTCCATAAAAAGAAGAGTAGAGACAGCCCAGAGTCCCCAGGTCTGCGAAGGGTCAGGAGGGGTCAAGAAAGGAGTAGGGAGGCTGAAGGATACAGGGCATTTGAATCCAAATCACTGCTCTGGGCTAGGGAATAGAGCCAGCAGACAGAGGTGGAAGGGATTCTGGAAGGGGGACCTTTCAGTCCCCCAATCCCAAAGCTCAGGGTGGAAGGGGGTAGAACAAGGGAGCAGAGTGTCTATAATTATTTTTATCTTTTATTTTTGGAATCTAGCAGTACCTGGCAGCAGGGAGGGGATGATACAGTGGGGAAAAGCATCTGACAAGGCCAGTTAGAGCAGAGGTTGGGAAGGATGGAGACTTCCTGCTTTGGAAAGCTGGAAAGCAGGCAGGGACTGGTTGCCACTCCAGGTCACTAGCTGGGCCCATTCATTCCTTTCACAATCCTGACCCATCCTCCTCTGGACTCACTGTGCCTCAGTTTCTTCCCCTCGATGGAACGAGAAAATAGCAGCACCCGCCACAGCCAAGAGATGAATTCTGAGCACTTACCACGGGCACTTTATGGACATAAAATACCTCTCGCTGTGGGACAGATAACCAGGGCACCAGAGTAGTGGTGAAGAGATGTGAGGCTTAGAGGAGTCACAGGCTTCAGAGTACAAGTTCCCCTCTGCCTCCCAGCTGGACAGTGCCTGACACCAAGGAGCTGAGAACCTTCTGATCCATACCCTATCCATACCTCACCTCCAGACCTCTTGGCTCCAGGCAGGAGACTACAGGATGTCAGGAGTGGAGGGGGAAAGAACCTTCAGCAAAACGAACTCTGAGTAGAGCATCAGTCATGGGTCTGACGCAAACAATACGGAACACAAGTAAAACCTGAGCTGGAAAGCTGACCTGGAAGGCTTGTTCTTCCCGAGAGCATGACTTTCCTGCCTGGCCCAGCTGGTGGAAGGGGCAAAGGTATGTAACCACCTTTGGAAAGGTGATGGTGGTGAATTTTGGCATCTTATTCCCATTCCCATAGTGAAAAAGTCAGATGAGGTATTTTGGTGCAGGAATGGGCAAGGGCTCATTTCAACTTGCCTCCTCCTGTGCAGCAGCAGTATGATCCCCCCCTCTCTCCTCTCTGGCCCTGTTCTTCATCACTCCTTCTGCTCCAATCTTGGAGAACAAGATGCACCTGACCACCAACACCATTCACATTTCCTTGGTGGGAAAAAAGAAACAGAGAAGTGAAGAACAGAAGATGCCTCCTCCAAGGTCAAATGCCCATGTCTCTTGATCTTGGCACAGGGTGGGGATTGGGCAATAGGCATCAGGTGACTTCCCTCTACAAATTCTAGACAGCTGGGGCAGTAGACTTGGAGACACTTAGAATATGCCCCTTTAATGCCACCAAATAAAGACCTTTGGGGGAAGGTCATTCTCTTATGAACATAAATCTATGAGTTGAAGTCTCATTCCCCTGGTCTTCCTCACCCCCAAAGAGGCATGGGGTAAAGAGGCTTGGGGGCATAGCCCAGCAAACTAGTGGGAACTAGTACCCCCTCTCACCTTATGACGTGTGTGGACCTGGCCAGTGCCCCTCTGATCATAATTAGTGTAATTATTATTTACTTTGTGTATTTGTTACACCGTGTGTGTGATTGCCTTTGTTTGTTAAGGGTGTCTGAGGAGTATGGGGCTGACAGGGGCACTGGAATGCCGGGAAAGGACCTCTTCACTGAGATCAAGGCTTCCTGAAGGGAACCATTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTATGTGACAGAGGGCAAAGATGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACACAATCCAGCACTTGAACCTGAAAAAAGAAAAATAAAAGCAGTCAAAGAATTTAGAATTCAGCGTTAAGCTCTTCTCCCTAATCAAGCGCCATGTTTACACCTCAGAGACCAGGAAGCAGAGGATCTGAGGGAGAATGAAACTTTGTGCTTAAGGAGTAAGAAGATGGGGGTCTTTGGGATGAGTGCTGGGGCTTGCAGCCAAGGAAGGTTGGGCAGAGGATGGGAAAGAAAGGGAACCTAGACCAACTCTTCACTGGAGGCTTGATCCTAAACAGTCCCAAAGATTACAAAACCCTCTCCCAGCCTCCACAGAGCAGAAGATCTAAGTCCTCTTGAGATATGATTCAGATAATATCTATCCTATTTTCCTGAAGTTCCCTGACCCTAGGT EMBV3_27284 GAGCCGGAATCAAGACATTCTGGAGAATTTGGCCTGGGGGTCTTCAGAGAGCATTCTCCA Gene GeneID:514123|INPP5K:NM_001101986:115_cdna Constitutive 0 NULL GeneID:514123 19 GENE INPP5K MGC140383 SKIP inositol polyphosphate-5-phosphatase K EMBV3_25182 ATGCCATCAGCTGTACCATCTTCTGCTTCTCCTGTTGACAGTTACTAGGGCTGGGACTTG Gene BVT0102_272409 + 1 EMBV3_05600 GK000003.2:3119591-3166688 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_12811 GTTTATTGCTGTGAGGGGCATGACTTGATGGTTTCCTGTGGCTTATACCAACATAGCCAC Gene GeneID:518830|TROVE2:XM_002693927:23_cdna Constitutive 0 NULL GeneID:518830 16 GENE TROVE2 NULL TROVE domain family, member 2 EMBV3_01611 AGAAAATCCTACAAGAGGGGTGGGTGCATGTCTTAATGCTGGGAAACAGCAACTTTGGGG Gene GeneID:528907|OTUD4:XR_084597:49_cdna Constitutive 0 NULL GeneID:528907 17 PSEUDO OTUD4 NULL similar to OTU domain-containing protein 4 (HIV-1-induced protein HIN-1) EMBV3_32061 CATACGAAAGGGCACAGTGCTTTTCCATTTGATCCATCCTTTACTGCTTTGATAACCACT Variant GeneID:512443|CRISP2:NM_001038089:267_cdna 137^244 1 EMBV3_39654 GeneID:512443 23 GENE CRISP2 MGC133685 cysteine-rich secretory protein 2 EMBV3_23498 TAGTTCAGTGTTCCATGGGGGGCCAACCAGGGCAACAGAAGCAGATCTGATGTGTTTCCT Gene GeneID:523226|PCDHA13:NM_001102506:247_cdna Constitutive 2 NULL GeneID:523226 7 GENE PCDHA13 MGC165970 protocadherin alpha 13 EMBV3_30388 TGTGACACTCATGGCTCCTCTTCCAGTCCTCTTGAGGTTACTGCCCTATTGCCACACTAA Gene GeneID:516396|LOC516396:XM_002693217:432_cdna Constitutive 0 NULL GeneID:516396 15 GENE LOC516396 NULL similar to olfactory receptor 639 (predicted) EMBV3_12205 CCCCACAGGTGCAGTGTCTCTTTATAGTCACAAGGAATGGTATCTAAATGCCTGGCCACC Gene BVV0102_020396 - 0 NULL GK000019.2:26715382-26724672 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00092927 TCONS_00092926 1 XLOC_057022 Coding TCONS_00092926 XLOC_057022 Coding Coding DHX33 19:26702130-26722396 j TSS69825 5706 1 TCONS_00092926_3 705 0.134419908867858 12 0.719022945965951 2.13943137422286e-07 1.55866438495206e-07 1.45117164410746e-07 1.46730225112306e-05 1.38182799690108e-39 6.31720070335315e-06 2.37174367256634e-08 9.15257683430198e-08 4.63028755921328e-05 0.000430022636113037 0.000336033624649813 0.000441184304653158 4.47456265134686e-08 5.1124625697644e-08 2.0602148376306e-05 0.00402242709242616 2.53268036590205e-07 0.0039600151875715 1.12260378011294e-07 0.000130923812539667 8.78290150924298e-59 0.000629799425624251 0.00115593564345893 0.00165215947290516 5.29921255102345e-05 1.14176358888752e-07 9.15033261821125e-08 0.000169174640748514 0.0002380121242994 9.4146695784374e-08 NM_001034563.2 DHX33 Bos taurus DEAH (Asp-Glu-Ala-His) box polypeptide 33 (DHX33), mRNA. 0.0 1792 95.36 0.184016824395373 NM_020162.3 DHX33 Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 33 (DHX33), 0.0 2857 81.43 0.509463722397476 TCONS_00092926_3 sp|Q9H6R0|DHX33_HUMAN DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33; 0.0 1345 91.51 0.998581560283688 4 coding 0 0 0 0 0.120962913394627 0.437279490690129 -0.0238819086679725 0.63526659443573 TCTCTCCGCCCTCGGGAAGCGAAAGCCTCGCCACGCTCTCAAGTGCATGCTGGGAGTTGGAGTCCCCTTAAAGGCCTCGGGTGGCCGTGAGGTGAGCCGCGTAGCTGGGAGCCACTAGCACGTGGCGGGAAGGGGCGGTGCGCACTAGCTGTGTGTTCCCTAGAGCCGCGGGAGCTTCCCGCCCTCGCGCCTCGCGTCGCGGCGCCTCCCGTCGCGGTGCCCTCCCGACATGCCCGAGGAGGCGGGCTTCCCGCCGGCCAAGAAATTCCGGCCGAGCGCCGGGCCTCCGAGCCGCGCCAGGTCCTGCCCTCCCGGGCGGCGTGCGGTGATGCTGCTGGCAGCGGGCGCCGGCGGAGGAGGTGGAGGCCGGAGGCAGCAGCCGCCCCTGGCCCAGCCCTCGGCCAGCCCGTACCCCGAGGCCGTGGAGCAGCAGCGCCGGAATCTGCCCATCTTCCAGGCGCGAGGCCAGCTGTTGGCCCAGCTCCGAAACCTGGACAGCGCCGTCCTTATCGGAGAAACAGGCTCAGGGAAGACAACACAGATCCCTCAGTACCTGTACGAAGGGGGGATTGGCCGCCAGGCCATCATTGCTGTGACCCAGCCTCGCCGAGTGGCTGCCATCTCTCTGGCTACCAGAGTCTCTGATGAGAAGAGAACAGAACTTGGGAAGCTGGTCGGCTACACGGTGCGCTTCGACGATGTCACCTCAGATGACACCAAGATCAAGTTCCTGACCGATGGCATGCTCTTGCGCGAGGCCATTTCGGACTGCCTGCTCCGAAAGTACAGCTGCATCATTTTGGATGAAGCCCACGAGCGGACTCTCCACACGGATGTGCTCTTCGGGGTGGTGAAAGCTGCACAGAAGAGGCGAAAGGAGCTGGGGAAGCTGCCTCTCAAAGTGCTTGTGATGTCAGCCACGATGGACGTGGACCTGTTCTCCCAGTATTTCAACGGAGCCCCCGTTCTCTACCTGGAGGGCCGGCAGCACCCGATCCAGATTTTCTACACCAAGCAGCCCCAGCACGATTACCTGCATGCCGCCCTGGTTTCCGTATTCCAGATCCACCAGGAAGCCCCCTCCTCGCATGACATCCTGGTGTTCCTCACCGGGCAGGAGGAGATCGAAGCCATGAGTAAGACCTGCCGGGACATCGCCAAGCACCTTCCAGACGGCTGCCCCTCCATGCTGGTCCTTCCACTCTACGCCTCCCTGCCCTATGCCCAGCAGCTGCGCGTCTTCCAGAGGGCCCCAAAGGGTTATCGCAAAGTGATCATTTCAACCAACATCGCTGAAACCTCCATAACCATTACAGGAATAAAATATGTAGTTGACACGGGCATGGTTAAAGCAAAGAAGTATAACCCCGACAGTGGGCTGGAGGTGTTGGCTGTGCAGCGGGTATCAAAGACCCAGGCCTGGCAGCGCACGGGCCGGGCCGGCAGAGAGGACAGCGGCATCTGTTACCGGCTCTACACGGAGGATGAGTTTGAGAAGTTTGAGAAGATGACGGTGCCAGAGATCCAGAGGTGTAACCTGGCGAGCGTGATGCTGCAGCTCCTCGCCATGAAAATCCCAAACGTGCTCACCTTTGACTTCATGTCCAAGCCGTCTCCAGATCACATCCAGGCGGCCATCGCCCAGCTGGAGCTGCTGGGTGCCCTTGAACACAGGGATGGCCAGCTCACCCTAACTCCAATGGGAAGAAAGATGGCGGCTTTCCCACTAGAACCCAAATTTGCCAAAACCATCCTCCTGTCCCCCAAATTCCACTGCACAGAGGAGATACTGACCATTGTCGCCCTGCTGTCTGTGGACAGCATTCTCTACAACCCTCCATCACGGCGGGATGAAGTGCAGAGCGTGCGGAAGAAGTTTGTGTCCAGCGAGGGCGATCACCTCACCCTGCTCAATGTCTACCGGACCTTCAAGAACACCGGCGGGAACAAGGAATGGTGCAAAGAGAACTTTGTTAACAGCAAGAATATGATGCTAGTAGCTGAAGTCAGAGCACAGCTGAGGGACATCTGCATAAAGATGTCCATGCCAATTGTGTCCTCCCGGGGGGACACGGAGAGCATCCGCCGATGCCTGGCACACAGCCTCTTCACGAGCACCGCTGAGCTGCAGCCAGACGGGTCCTACGCCACCACGGACACCCACCAGCCAGTGGCCATCCATCCCTCGTCCGTGCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACGGAGCTGCTCTTCACCAGCAAGTGCTACATGCGTGACCTGTGCGTCGTGGACGCCGAGTGGCTGTACGAGGCCGCCCCCGACTTCTTCAGGAAGAAGCTGAGGACTGCCAGGAACTGAGCCGCCCTGGTGCCAGGAGCCGGGCTGCAGCCGGCCTCGCTGCGACCTCTAAACGTTGGCACCTACAGAGGCCACGGTGGTTATGGGTGGGTCATGCCTGGCCTCCAGGAGCTTGAGAGCCTCTTTGTCTAAACTCCTCAGACTGAACCGCACAGACATGTAGAGGCCTGGGAGACTTCAAAATGATGCTTTGGGTTCTTGGTGGGCAACTTTGGGTGACTTCCTTTACTTTTGAGCCTCAGTTTCCTGATCTGCCAAGTGGGAGTGATGATACTTAAAGGATCGGAATCATGAGGCTCAGAGCAAGTGAAAAGAAAGTACCCAGAGCTGTGCGTGCCCATGATAAGCCACGGTAGACTGAGTGCCGAGGTGCTTGGTTGGTGTTACTGCTTATGTACGTGCCATGGATCGGGTACAGCAAAACCCCCAAGTCCTGGAGACTGCGGGGGATGGTCTGGAAAGGGGAGGTCGCAGAGGTCACAAGAGGTCACAGAGCTCCTGACCTTGGATCTGTTTGAACATCTATCTGCATGAAGTTTTGTAACAGAAAAGATTAACTTCTGTTTCAACAGGGAGGTGCTGAGCACCTAACCTCACTCCCCAGGGCAGGGAGCTTTCACAGCAGAGAGGCTAAGCACCTGTCCCCACCCTGCTTTCAGAGAAGTTCCTGAGTGAAGTATTTGTATCTTCTGAAGTGGGAAGGCTGATCTTATGTGTTGTCCTTCAGTCATGTCCAATTCTTTGTGACCCCGTGGACTGCAGCACGGCAGGCTTCCCTGTCCTTCACCATCTCCTGGAGCTTGCTCAAACTCACATCCATCGAGTAGGTGATGCCATCCAACCGTCTCACCCTTTGTCATCCCTGTCTCCTCCCGCCTTCAGTCTTTCCCAGCATCAGGGTCTTTTCTAGTGAGTCAGCTCTTCACATCAGCTGGCCAAAGTCTTGGAGCTTCAGCTTCAGCCTCAGTCCTTCCAGTTAACATTCAGGGTTCATTTCAGATTGTAGTGTGATGGCCTCCAGCATGGCCTTCTCTCTCTGTCTCTGGGCCATAAACCCATGAGCTAAGGAGTGACTGAGCTGAATTTAAGGCATTTCCCTTTTGGCCAGGCCTCTGGGGGTAAGTGGAAGTGAAGCCAGGCAGCCTTGACTCATCTCATCCCCTCATCTAGTGTTTATGTTCTTTTATCTTATTTCCTATGATGTTTTTCCTTCTTAGGGACCAGGGGACATCCTGGCTTTGCTGCTGGCACCTCTCTCACACTCATTTTCCACATTTGTCTGAGGGGATAAAGGGTCTCCACAGACTTCCTGTTCTCATATTTTGAGAAGGGAAAAGACACCAAAAGTCATTCTTAACTATTTAATTTGAAAATCGTTGTTGTTTAATAGCTAAGTCATGTCTGACTCTTTGCAACTCCATGGGCTGTGGCCCTCCAGGCTCCTCTGTCCATAGGATTTCCCAGGCGAAAATATTGGAGTGGGTTGCCATTTCCTCCTCCAGGGGATCTTCCCAACCCAGGAATCAAACCTGAGACTTTCCTTAGAGAATGTTTTGGCCTGGAAAATGCCAAAATTAGCACTTCTATTGTGCTTAATTGGTCTAAACACTATATACAGTATTCTGGTCATTACATACAGTGAATCATACAGCTTTTAAGCAGAGGCCTAAATGGCCTGAGAGATCCTTCAGTGATAATGGATGGTGTCTTCGTTTCGGTTCAGTGAGACCCTGGCGGACAGGAACACCCCTCCCAGGCCTCATGAGTCCACGGTGGTGTGTGTCAAGTTTGCCTCAGCACCAGCTGTGCGTCTGAGCAGTCAGACTTTTAGCCAGTGTTCCCAGCTATCTGGGCACGTGTGAATTCTTCTTGTTAAAAACAGTTATGTTAAGGCCAAAGAAGATTCGACAGATCCTAAATACCCTGTTTTGCTAAATTCTTAGATTTTTCTTGTTCTTACCAGGGCTGACTTTATGAAAAGTTATTCAGAAAAAAACTTAACTGTATTTTTCTCACTTATTTAAGAGTCCTAGGAGGTGTAGCCTGACTTGGTAAAAGAAATTACTGTATTTTTAATGAAACATTCATCACACTGGTAAAAAATATTGGGAGTGGGGTGATATGTTTCTCATAATGTTGCAAATTATGGTGGCTCAGACAGTAAAGAATCTTCCTGCCATGTGGGAGACCTGGGTTCAACCCCTAGGTTGAGAAGATCCCCTGGAGGAGGGCATGGCAACCCACTCCAGTATTCTGGCCTAGAGAATCCCCATGAACAGAGGAGCCTGGCAGGCTACAATGCATGGACTCATAAAGAATCGGACACAACTAATCAACTAAGCACAACTTTCTCTAGGGCAAGTAAAATTTAGCTTTTAATCATTTTTGTGCACCTCAGAGTTCTGAACTGTTTCAGGAAATCTTGTATTTTTTCTGACCAGGAGTATTGGGTAAATAGCTTCTAAATAAATGTAAATAGCTTCTGTGTTTCTCTACAAAGATATATTTATCATTGTAACATTCTGGTAGAGTTTTGATACAGTAGTTTTTTTATCAGGCTTTTTAAAAAGTTAACTTTTCAAGTAGCTGCTCAGGGACTAAATCAGATTGGAAAAGCCTATCCCTGCTCCATATTACTACAAAGAGATACATGGTTGTTTATACCTAGCTGCAGGGCACAGATAAGTACACTTTAAACTTTCTAAGAAAGTTAAATGTTTCAGTGATGTTACAATCTCATCTTGAGCTACTCTTTTCAATCCCTAAAATCTCTGATGGTGTGCTGCCTTTTTTTTTTTCCAACCTGTGAAATCCATATCTGGGTGAATCACTAGTTCCCTTGAGCACCTTTGTGTATTAATAAATAGATGCACTCCAAGCAGATTGCATGCCTCAGATGTTTGTCTTCTGCTTCTAATAATCATGGAGGGCAGCACAGATCCCATTTACAAAGGGAAGAACTGCCCAACACCCAGTTCTTGGTAGAAACCCTTCCTTAATGTTGCATCTCTGCTAGGAATAAAGAGATGCCAGAAAGGAGGCAAGTTTGTGCTCTGTGGAAAGAACTGATTATATACTGTGATGCATAAATCCATTTAATTCAGCTCTCAAGAAAACCTGTGGCCAGGTGGCCAGGCATTTAGATACCATTCCTTGTGACTATAAAGAGACACTGCACCTGTGGGGAAGCAAGAGTTTTATTATATTTTATTTGATCAGAATATTATAACTTGCAGGAAAGAGCTCAGTTCAGATTTCTGTTGTGTTCTGAGACTCGTTTCTTATTCAAACAGGCATAGGTCTGTAGAAGCATCAGCATTTGCACGACTCAAACCCATTAAAAGTGAATCTAGTACATA EMBV3_24697 AAAAACTGTCAGATTGGACAGAAGCAACTGAGTCATGAAGAAGTACGACAAAAGCGGCAG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_35839 GCTGAAATTTACTGCTGCGTGGACAGAGGTGAGACAGCGGCACCTTTAGCGTCCTAAGAA Gene BVT0102_125860 + 0 NULL GK000018.2:30158279-32191989 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00085918 TCONS_00085921 1 XLOC_051996 Coding TCONS_00085921 XLOC_051996 NonCoding Coding - 18:31432149-31448140 - TSS64046 2403 1 TCONS_00085921_1 100 0.296296296296296 3 0.849906191369606 0.0093110582083869 0.00871362639204881 0.0100784040452337 0.00463660973507628 0.00422542137031529 0.00129827597421725 0.00454964187552201 0.0029534385076662 0.00426150298046138 0.00118216694978508 9.48150068072742e-05 6.49429290183549e-05 0.000849959179567058 0.000744215960664508 0.000634032320826863 8.64935671823946e-05 9.458423782709e-05 0.000371802141549256 0.00970528761204793 0.00936903812389906 0.00548399166359489 0.000220711750207385 0.000466273788861188 0.000657175679499157 0.0067266067923424 0.0104385735965986 0.00883096553162726 7.57670733398933e-05 8.5080192412453e-05 0.000285825455356675 XM_005197762.1 CD58 PREDICTED: Bos taurus CD58 molecule (CD58), transcript variant X2, 4e-30 138 75.00 0.0919683728672493 0 noncoding 1 0 1 0 -1.18638245334937 0.0272749148025534 -0.0039350178420961 0.931021710352842 CCATCAGGTGAAAGTTGTTAGCATACAGCTTTAAGTAGCCCTACCAGGACGCCAACTCAAGCGAGCTCAGCCGTTAATCCCGCTGAAATTTACTGCTGCGTGGACAGAGGTGAGACAGCGGCACCTTTAGCGTCCTAAGAAGTTTTTAAGACAGAAATATTCTTTTTTACACATTATATGCTAGGATGAGCTAATTGCCGAATACATCAACTTCCATCTGCGACTGACCCCACAGCTCTGTGACAGCTTTCGGTTTCCAAAGGCCTTGCCAAAAACCATGTCTCTCCTGTCCTTAGGAGGTGCACATGCCCAACGTCAGGAAAGCAGCATTATGTAAAGGAAGAAAGCAAGGCAAGGGATCCCATTTGGCAGGTCTCCTGACACCTACAGGACACCGAAGCCAGGCCCTTCAACAGACGGCGGCGAGGCAGGCTTTCTCTAATTGTGGTGAGCAGGGGCCACTCTACAGTTGCGATGTGCAGGCTTCTCACTGGCTTCTCTTGTTGCAGAGCACAGGCTCTAGGGACCCTGGCTTCTTTCAGTTGTTTGGCTCTAAGGAAAGTAACTCAGAAGCTGTGGCATGTGGAATCTTCATGGAAGGAAAGTGACTCAGTAGCTGTGGCATGTGGAATCTTCATGGAAGGAAAGTGACTCAGTAGCTGTGGCATGTGGAATCTTCATGGACCAGGGATCAAACCTGTGTCCCCTGAGTTGGCAGGAGGAGTTTTATCTACTTCTCCAAGATGTCCTATTCTGGTTATTTTAAATTTATATCAATTGCATAATTAACTATTAAAAAAATAAAGCACTGTAAGAAATTAAGCATTTAGCTTTTATATAACTTCATCTAATGTCTACTAAATGTTTTAGTTCCCTAGAAGTTCTTAGAAACTATCCATTTTAATCCTGAATATTGTTTTGTGAAGTCAACTTCAGTCTCTTTTCTACTAAACGATTTGCAATTTGGTTCAACTCACGTATCTGCTAAGTAAACTTTATATCTGTATCTTTTACAAATGGAACCCAACCCATAAGCAGCTCGTTTCTTCTAACTTTAGAAAAAGCATTCAAAATATGAATGATTCCCCTCATACCTTCCTACTACCTGAATTGAAGTCCCCATCAACTCTCATGTTAATTGCTGCAATTAACTACTAACAGATCTTGACACTTTTCTGGTCCCCTATAATCTATCACATGCTAGCTTACAGGTTTAGCAATTCTTGATGAGACCAACGTGGCTTCTGCTTCAAGATTGTTGCTTTAACTCTTCACTTCACCTGGCATATTCAACACTGGACTGCTGCATGACTTGATCCTTCATTTTATTCAAGTTTTGTTTGCAGAGGACAATCATGACCAGCTTATCTGAAATATCCCATTCCTTTAAACACTGGGATTTTTCTAGTATGAACTAGTTATCCTTAACTGTTGCATTTTTGTCTTGTCAACTTAACAGTTTTTCATTGGCCTTTAGCCTTTAATCCATCATTATCATTACAAATTTTATCACAAAATATCTCACTACAATTAAAAAAATTATTGAGGTGTAGTTGATTTATAATGTTATGTTAATTCCTGCTTTTCAGAAAAGTGATTCAGTTATACATATTTTTTCTAAATTATTCCTCCATTTGTTTATTTTTGGCAGTGGTAGATCTTCGTTGCCGCACGCAGACTTTCTCTAGTTGTGGTGTGCAGGCTTCTCATTGCAGTGGCTTCTCTTGCTGCAGAGCAGGGGCTCTAGGGCATGCTGGCTTCCCTAGCTGTGGTACGTGGGCCACAGTAGTTGTGGCATGTGGGCTTAGGTGCCCCGTGGCATGTAGAATCCTCTCAGACCAAGGATCCAACCTGTGTCCCCTGCACTGGCAGATTCCTAACCAATGGACCACCAGAGAAGTCCCTATTCTTTTTCATAGTCTATTTCATAGTCCAAAAAGACTATTCTTTTTCATAGTCTTTTCTATTACGGTTTATTACAGGATACTGAATATAGTTCCCTGTGCTATACAATAGGACTCTCTCTATTTTCTTTTAATAGAGCTTATGTATTCCCATTCTTGTTTGAGAAGTTTTTCCCCACCCTTAGCTTTTATATGTAGCCTCCAAGATTTACTTCTAACGTTGCTATTCCATAATGCATCTGAAAATTACTTTGCATTATGATGTGAAGTGGAAGCTTAACTTAGCTTCATCCATTCATTTTACAAATCTTTACTTCACTTTATATTTATATTTCTCCATTGTATTTGTGTTGATTTAAGTGCTGATTATTGTCTGTTTTTCCTACTTGAATGTATTATCCTCATGAATAAGGCATTTTGTATCTTGATCATCACCAAAACATTTGAACTGCACACAGTAAGGATCCTGTAAATATTTGTTAAATAAATTAACAAATAC TCONS_00085926 s 3' 386100 TCONS_00085926 s 3' 372081 EMBV3_18981 CGTGGGCCGCAGCAAAACCCAGCACAGCCAGAAAAGATAAACGTTCTCCACATGATTCTA Gene BVT0101_004827 - 0 NULL GK000018.2:20318901-20999361 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31583 GAGGACCTGAAGGAGTTCCTTTTTATCATTCCCTTTGACTGCTGGGAACCAGCCCAGAAG Gene GeneID:281095|CSF2:NM_174027:19_cdna Constitutive 0 NULL GeneID:281095 7 GENE CSF2 NULL colony stimulating factor 2 (granulocyte-macrophage) EMBV3_42827 GTTATCACCGGACAGAGTGACTTCCACAGATAGAGAACCATTATCCCAACAAGGATAACC Gene GeneID:529184|RPAP2:NM_001103266:165_cdna Constitutive 1 NULL GeneID:529184 3 GENE RPAP2 MGC142888 RNA polymerase II associated protein 2 EMBV3_13348 TCCATCTCACACCCTGTGCCTCCAGTTACCCTGAACTGCTTGCAGTAACCTGTGCTATTT Gene BVV0101_022714 + 0 NULL GK000017.2:29552931-29777298 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_25907 CCAGGACTGGCTGTGTAGACTTGACCATCACTAATCTGCTTGAGGGAGCCGTAGCTTTCA Gene GeneID:509130|AUP1:NM_001015555:8_cdna Constitutive 0 NULL GeneID:509130 11 GENE AUP1 NULL ancient ubiquitous protein 1 EMBV3_38457 TGCCTCCTATATGATGTCATGAACCTCTGTCCATAGTTCTTCAGGCAGTCTGTCTATCAG Gene BVV0102_216575 + 0 NULL GK000006.2:67716144-67745740 6 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00190425 TCONS_00122300 TCONS_00207392 TCONS_00200492 TCONS_00008556 TCONS_00088547 TCONS_00031400 TCONS_00186535 TCONS_00031376 TCONS_00248101 TCONS_00238934 11 XLOC_116460 XLOC_073855 XLOC_125909 XLOC_122144 XLOC_004113 XLOC_053334 XLOC_017648 XLOC_112587 XLOC_017624 XLOC_151488 XLOC_145600 Coding TCONS_00248101 XLOC_151488 Coding Coding - X:118352920-118364485 - TSS185610 2061 3 TCONS_00248101_1 100 0.990295972828724 3 0.822033898305085 0.000851337094376389 0.0019386156463278 0.000237878666306565 0.00052014453286824 0.000178685565945434 0.000135391884173994 0.000662018927080829 0.000615585450557619 0.000139431473341308 1.2527121031539e-05 0 0 6.45042901486876e-05 4.128943973062e-05 5.49255722436832e-06 6.40749094068194e-06 0 2.02902176853861e-06 0.000193660279178056 0.000111129172048915 1.12791152069998e-05 9.14416843038003e-07 0 0 1.10362218207448e-05 6.83272799801716e-05 4.28799280708633e-05 5.82555439461807e-07 0 1.38911443531474e-06 XM_583514.4 PGM2 PREDICTED: Bos taurus phosphoglucomutase 2 (PGM2), mRNA. 0.0 1187 87.92 0.456089277049976 TCONS_00248101_1 sp|O02751|CFDP2_BOVIN CFDP2_BOVIN Craniofacial development protein 2; 9e-49 166 76.00 0.99 0 noncoding GCAGGAGATCCAAGTTCGATCCCTGGGTGGGGAAGATCCCCTGGAGAAGGGAATGGCAACCAACTGAAGTACTCTTGCCTGGAGAATTGCATGGACAGAGGAGCCTGGCAAGCTACAGTGCATGGTTTCGCAAAAAGTCTGACATGGCTGAGCGTCTAACACGCACACTGGAGAGCTTGTTCTTCATTGTGGCATGCCAACTCTTAGTTGAAGCATATGGGATCTAGTTCCCTGACCAGGGATTGAACCCAAATCCCCTGCATTGGGAGCACAGAGTCTTAGCCACTGGGGCCATCAGGTCCATGAATGAAGGCAAATTGAAAGTGGTCAAATAGGAGATGGCAAGAGTGAACATCAACATTTTAGGAATCAGTGAACCAAAATGGACTGGAATGGGTGAATTTAACTCAGATGACCATTATATCTATTACTGTGGGCAAGAATCCCTTAGAAGAGATGGAGTAGCCATCATAGTCAACAAAAGAGTCCAAAATGCAGTACTTGGATGCAATCTCAGAAAAGACAGAATGACCTCTGTTCGTTTCCAAGGCAAAGCATTCATAATCACAGTAATCCAAGGCTATGCCCCGACCACTAATGCTGAAGAAGCTGAAGTTGAATGGTTTTATAAAGACCTATAAGACTTTCTAGAACTAACACCCCCAAAAGATGTCCTTTTCATGGAGGACTGGAATGCAAAAGTAAGAAATTAAGAGCTACATGGAGTAACAAGCAAATTTGGCCTTGGAGTACAAAATGAAGCAGGTCAAAGGCTAACAGAGTTTTGCCAAGAAGACGCACTGGTCATAACAAACACCCTCTTCCAACAACACAAGAGAAGACTCTACACGTGGACATCACCAGATGGTCAATACCAAAATCAGATTCATTATATTCTTTGCAGCCAAAGATGGAGAAGCTCTATACAGTCACCAAAAACAAGACCAGGAGCTGACTGTGGCTCTGATCATAAACTCCTTATTGCCAAAATCAGACTTAAATTGAAGAAAGTAGGGAAAACCACTAGACGATTCAGGTATGACCTAAATCAAATCCCTTATGATTATACAGTGGAAGTGACAAATAGATTCATAGATTCAAGGGATTGTATCTGATAGACAGAGTGCCTGAAGAACTATGGACAGAGGTTCATGACATTGTACAGGAGGCAGTGATCAAGACCATCCCCAAGAAAAAGAAATGCAAAAAGGCAAAATGCTTGTCTGAGGAGAGCTTACAAATAGCTGAGAAAAGAAGAGAAGGTAAAGGCAAAGGAGAAAAGGAACGATATACTCATTTGAATGCAGAGTTCCAAAGAATAGCAAGGAGAGATAAGAAAGCCTTCTTCAGTTATCAATGCAAAGAAACAGAGGGAAGAAAGAGAATGGGAAAGACTAGAGATCTCTCCAAGAAAAGGAGTGATACCAAGGGAATATTTCATGCAAATATGGGCTCAATAAAGGACAGAAATGGTATAGACCTAACAGAAGCAGAAGATATTAAGAAGAGGTGGCAAGAATACATAGAACAACTATACAGAAAAGATCTTCATGACCCAGATAACCACGATGGTGTGATCACTCACCTAGAGCCCAGACATCCTGGAATGCGAAGTCAAGTGGGCCTTAGGAAGCATGACTGTGAACAAAGCTAATGGAGGGGATGGAATTGCAGTTGAGCTATTTCACATCCTGAAAGATGATGCTGTGAAAGTGCTGCACTCAATATGCCAGCAAATTTGGAAAACTGAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTCATTCCAATCCTAAAGAAGGGCAATGCCAAAGAATGTTCAAACTACTACACAATTGCACTCAGCTCACATGCTAGCACAGTAATGCTCAAAATTCTCCAAGGTAGGCTTCACTAGTACGTGAACTGTGAAGTTCCAGATGTTCAACCTGGTTTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGCCAACATTCACTGGATCATCAAAAAAGCAAGAGAGTTCCAGAAAAACATCTACTTCTGCTTTATTAATTATGCCAAAGCCTTTGACTGTGTGG TCONS_00245565 r 3' 81390 TCONS_00245565 r 3' 83152 EMBV3_05933 GGGCTTACCCAGAAAGCACTACCTAGGTAATTCCCTCTATGTTTTGTGCCAGTGCTAAGC Gene GeneID:783019|DIRC2:NM_001101287:110_cdna Constitutive 3 NULL GeneID:783019 1 GENE DIRC2 NULL disrupted in renal carcinoma 2 EMBV3_33522 CCGATCAAGCAAAATTCGCCTTTAGCACCACACCTTTGTGTGTCCTACAGAAATCATTGC Variant GeneID:281998|PRDX3:NM_174432:5_cdna 218^359 2 EMBV3_37886 GeneID:281998 26 GENE PRDX3 NULL peroxiredoxin 3 EMBV3_31309 ATGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTTAACTAGGGACAGCCCTTCTTTC Gene GeneID:100140016|ARHGAP6:XM_002700411:2_cdna Constitutive 0 NULL GeneID:100140016 X GENE ARHGAP6 NULL Rho GTPase activating protein 6 EMBV3_26975 TCGGTCAAGCAGGTTCGGGTTCAGTCTTGCCCCTTCCAGAAGAACGTGGAATCGACAATT Gene GeneID:613286|LOC613286:XM_002695955:425_cdna Constitutive 0 NULL GeneID:613286 19 GENE LOC613286 NULL similar to mitochondrial ribosomal protein L53 EMBV3_26330 TGTACTACGTGCTGCACATCACCAAGCAGAGGAATAAGAACGCACTGCTGCGCCTGCTGC Gene GeneID:512799|COBRA1:XM_002691696:35_cdna Constitutive 0 NULL GeneID:512799 11 GENE COBRA1 NULL cofactor of BRCA1 EMBV3_35423 ACATCAATGTATCCATGGCGACCAACACAGGCGGGATGAACAACATGAACCAGATGACCG Gene GeneID:508162|NCOA2:XM_002692724:174_cdna Constitutive 0 NULL GeneID:508162 14 GENE NCOA2 NULL nuclear receptor coactivator 2 EMBV3_14402 CGAATGTAAAACTTAACCTTTGCCTGACCCCCTGGAAAGGGAAGCTGGAGTGCTGAGTTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_10563 TTTGGAGTTCATTGTATGTTGGGGAATTGCCAAAGGTTAATACTGTTAGAGTCCCTTGGC Gene GeneID:537282|MYO1B:NM_001102199:11_cdna Constitutive 2 NULL GeneID:537282 2 GENE MYO1B MGC160128 myosin IB EMBV3_36812 GTTTAAAGCAGTGCAAGTCCAGCGGAGAAAAAACCAAAGAAGCGGGCACTGATAATCGAA Variant GeneID:505816|TRMT6:NM_001038040:892_cdna 370^497 1 EMBV3_31635 GeneID:505816 13 GENE TRMT6 MGC134456 tRNA methyltransferase 6 homolog (S. cerevisiae) EMBV3_17779 CCAGTAAAGGAAGGGGTGCCTGTCTCAGTTCAGGTTGTGTCCCTTATGGTAATGCGCCTT Gene GeneID:789317|LOC789317:XM_002686115:135_cdna Constitutive 0 NULL GeneID:789317 3 GENE LOC789317 NULL similar to metallaproteinase-disintegrin EMBV3_36038 ATGCTGAGAATCACTGTCTTTTCCCGTACGAGTGTTTGTTCAGAGGAGAGCGTGGTCTCG Gene GeneID:513397|DNAJA3:NM_001080270:147_cdna UTR3_Alt 2 NULL GeneID:513397 25 GENE DNAJA3 MGC143373 DnaJ (Hsp40) homolog, subfamily A, member 3 EMBV3_05671 CACAACGGCCTTGATTTCCCTTTTTGAGCATCCTGCTGGTGCATGTGAAGATGAAGAAGC Gene GeneID:531076|MGC151671:NM_001083712:139_cdna Constitutive 0 NULL GeneID:531076 1 GENE MGC151671 NULL hypothetical LOC531076 EMBV3_24005 GAAGCTGGGCGCTGCGTTCTGACTTTCGGACGAATGAGAGCGAAAAAAGCCCGGCGTAGA Gene BVV0101_058483 + 0 NULL GK000018.2:35741011-35747166 18 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_32937 GTTGATGCATTTTTCTCTGAGCATGGTTTCATAGAGAATTGAGTTATATCCAGACATTTC Gene GeneID:511003|CXHXORF23:NM_001083665:2_cdna Constitutive 5 NULL GeneID:511003 X GENE CXHXORF23 NULL chromosome X open reading frame 23 ortholog EMBV3_15957 TGCACCCAGAACTCCTATGGGCCAGATGTTCTGTGTCTTCTATTCTTTACTGGGGATCCC Gene GeneID:523049|LOC523049:XM_002690919:216_cdna Constitutive 0 NULL GeneID:523049 10 GENE LOC523049 NULL similar to pancreatic potassium channel TALK-1b EMBV3_06677 GGCTATTAACCTGGACTTCTGTGATGCTCAAACTATCCACCACTACACCTGTGAGCTGCC Gene GeneID:781446|LOC781446:XM_002687331:162_cdna Constitutive 0 NULL GeneID:781446 5 GENE LOC781446 NULL similar to olfactory receptor Olr1108 EMBV3_41279 CTTTGCGTAACGCCAACCTCAGGCGAGATGGAATATTTCCAACCTGCAGCAGCCTCAGAG Variant GeneID:525931|PDGFD:NM_001083706:14_cdna 266^633 1 EMBV3_29260 GeneID:525931 15 GENE PDGFD MGC139243 platelet derived growth factor D EMBV3_39872 ACTCAAGTACTACATCCCGAAAGTTGTTTACACTGGCGTCTACCCGCCTTATGCAGGAGG Gene GeneID:784359|LOC784359:XM_002689212:28_cdna Constitutive 0 NULL GeneID:784359 7 GENE LOC784359 NULL similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 EMBV3_33396 CGACTGCAGAGTTACAGGAGATTACTGTTTGAGTGGATTCCCATGTTGCTGTCCTGCCAG Gene GeneID:100138653|ZNF329:XM_002695510:319_cdna Constitutive 0 NULL GeneID:100138653 18 GENE ZNF329 NULL zinc finger protein 329 EMBV3_28327 GAGCAGTTTTGCTCTGGGATGGGGTTGCTTCTGGGTTGCTGAGAAGTAGCCAAATACATC Gene GeneID:781044|RHOU:NM_001098147:2_cdna Constitutive 0 NULL GeneID:781044 28 GENE RHOU MGC154996 ras homolog gene family, member U EMBV3_30821 AGATAAAGAGCCTGGGTCTCGCCAGTGTGTGTGCCACCTCCTCCCTGACCCCTTAATAAA Gene GeneID:523846|SPOCK2:NM_001101115:335_cdna Constitutive 2 NULL GeneID:523846 28 GENE SPOCK2 NULL sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 EMBV3_08965 CCACCTCACAGAGTCTTGCTGCTGGTGTGGACAACCATCTACTCCATCACAGGGTATGCT Gene GeneID:100295327|LOC100295327:XM_002697287:79_cdna Constitutive 0 NULL GeneID:100295327 23 GENE LOC100295327 NULL hypothetical protein LOC100295327 EMBV3_28216 GTATACACCAACAACATCACCGAAGAACAGTGGCTTGAGGCAGCCTTCCAAGCTCTCCAC Variant GeneID:789296|ARHGAP27:NM_001102352:302_cdna 643^965 1 EMBV3_26265 GeneID:789296 19 GENE ARHGAP27 MGC140292 Rho GTPase activating protein 27 EMBV3_04502 TTGTAGTTTGGATGGGTTAGGAAAAGCCTCCGTTTTTCATTCTCCTAGGTCAGTCAGTGC Gene GeneID:509827|ATF2:XM_002685316:163_cdna UTR3_Alt 5 NULL GeneID:509827 2 GENE ATF2 CREB2 MGC142504 activating transcription factor 2 EMBV3_18552 GGACTTCGTGACCGAGGCGCTTCAGAGCAGGAGCACGGCTTGGACTTCCAGAGACTTATG Variant GeneID:513533|PMVK:NM_001046151:129_cdna 112^175 1 EMBV3_29662 GeneID:513533 3 GENE PMVK MGC137482 phosphomevalonate kinase EMBV3_31400 AGCTGAGCAAGGCTGACATCCACCTGGTTGAATTGCTCTATTATGTGGAAGAGCTGGACC Gene GeneID:521685|GSTA5:NM_001099016:294_cdna Constitutive 0 NULL GeneID:521685 23 GENE GSTA5 MGC152339 glutathione S-transferase alpha 5 EMBV3_36706 TGAAGTACCTATTACACCCAAATCACCTTATGAACGCGGGGCCTGGGGCTTCTCACTTGG Gene BVT0102_072797 + 0 NULL GK000021.2:22744782-22754371 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_31797 ATGTAGCCATCTTTTGCAATTTCGTGGGTTTCTTTTTTGGAAAGTTGTGTATTGCACTTC Gene GeneID:506781|CNKSR3:XM_002690349:5_cdna Constitutive 2 NULL GeneID:506781 9 GENE CNKSR3 NULL CNKSR family member 3 EMBV3_16372 TGTACGGGAAAGGTTCTCCTACCCCCGCCTTGGCCCACCCCTACTTGATAAGTTTTGAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_21389 AGAGGGCGCAGCATCAGAGGCTCCTGGAAGGTAGATGCTTTCTGTGATAATAGCCATGGT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_28865 GTTTATAAGAATAATGACATCCGTCTGGAGCTGTCTCGCTTGGCCAGGATTGGGGACACC Gene BVT0102_075595 + 0 NULL GK000010.2:90231155-91597566 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00015407 TCONS_00015406 1 XLOC_008481 Coding TCONS_00015406 XLOC_008481 Coding Coding - 10:90911242-90931992 - TSS10887 516 1 TCONS_00015406_3 126 2 0.975227721817919 0.0021885103341272 0.000707093521656186 0.00159596926672824 0.000933352250870234 0.00140173617839892 0.000402065798901128 0.00130950765725191 0.000136431641044906 0.000344591436373606 1.0968929360861e-08 0.000244002074017385 0 0.000379402301416373 0.00141709825291807 9.45042716454553e-05 0 0 0 0.00422462785451841 1.6812928056904e-08 0.00152668301690351 0 0 0 0.00252427493457593 0.00124247892699878 0.000760774693026189 2.81159329962732e-08 0 0 XM_005212548.1 NRXN1 PREDICTED: Bos taurus neurexin 1 (NRXN1), transcript variant X1, 7e-69 264 73.20 0.858527131782946 XM_005268218.1 NRXN3 PREDICTED: Homo sapiens neurexin 3 (NRXN3), transcript variant X1, 0.0 648 92.34 0.858527131782946 TCONS_00015406_3 sp|Q9Y4C0|NRX3A_HUMAN NRX3A_HUMAN Neurexin-3-alpha; 2e-73 240 100.00 0.984126984126984 2 coding 0 0 0 0 -0.0720160782129938 0.492471333893404 -0.023030988225559 0.634077116890513 GGGAAGGTGGCTGCCGTGTTCTGTCTTCTGCGCACGGTGAGTGTGTCACTCCCCGAACTTTTCTGTGCACAGGTTGTTTATAAGAATAATGACATCCGTCTGGAGCTGTCTCGCTTGGCCAGGATTGGGGACACCAAGATGAAGATCTATGGTGAGGTAGTATTCAAGTGTGAGAATGTGGCCACACTGGACCCTATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAATACCAAACGCATGGGCTCTATCTCCTTTGACTTTCGCACCACTGAGCCCAACGGCCTGATCCTCTTCACTCACGGCAAGCCCCAAGAGAGAAAGGATGCCCGGAGCCAGAAGAACACCAAGGTGGACTTCTTTGCTGTGGAACTCCTCGATGGCAACCTGTACCTGCTGCTTGACATGGGCTCAGGCACCATTAAAGTGAAAGCCACGCAGAAGAAAGCCAACGATGGGGAATGGTACCACGTGGATATTCAGCGAGACGGCAGATCAGGTAGG TCONS_00018421 r 5' 200980 TCONS_00018421 r 5' 200980 EMBV3_36107 TTCTGCCGACAGGACATCATCACCCTGCAGGACCCCACGAACTTGGACAAATTCAACGTT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_00239 TCATGTAGGCTCTATCTCTAACCCTTTCCTCTCCTTCATGTCCAGTTGCTGAAGACAAAT Gene GeneID:539290|PLSCR4:NM_001081732:53_cdna Constitutive 2 NULL GeneID:539290 1 GENE PLSCR4 MGC148451 phospholipid scramblase 4 EMBV3_33849 GAGAGAAGATAGAAGATGCAAAGGAGTCCCAGCGTAGTGGGAATGTAGCTGAACTGGCTC Gene GeneID:512427|NASP:NM_001038088:137_cdna Constitutive 0 NULL GeneID:512427 3 GENE NASP MGC134231 nuclear autoantigenic sperm protein (histone-binding) EMBV3_06655 AGCCACCAGAGACGTGGGGGAGTCCCCCTCGTGTGTTTCTATTTTTTGAAAAGCGGACAT Gene GeneID:497011|ID1:NM_001097568:829_cdna Constitutive 0 NULL GeneID:497011 13 GENE ID1 NULL inhibitor of DNA binding 1, dominant negative helix-loop-helix protein EMBV3_14277 AGTCCACTAGAGACTTCAAACTGAAACCCAGATGGGCAAACAAGGCTTCCCCTCCAGAAG Gene GeneID:531405|SORCS3:XM_002698472:512_cdna UTR3_Alt 2 NULL GeneID:531405 26 GENE SORCS3 NULL sortilin-related VPS10 domain containing receptor 3 EMBV3_27047 GGAGAAAACTGTCACCAAACTCATGGGGGATTTGCAGAAAACCATTTAGGCCACCTTGAG Gene BVT0102_100029 + 0 NULL GK000022.2:51692386-51747918 22 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00127271 TCONS_00127273 TCONS_00127269 TCONS_00127274 TCONS_00127275 TCONS_00129046 TCONS_00127270 2 XLOC_077612 XLOC_078007 Coding TCONS_00127274 XLOC_077612 Coding Coding PRKAR2A 22:51675618-51731537 j TSS95231 4769 1 TCONS_00127274_4 250 11 0.914911119854072 0.00697420099806902 0.00516823364489597 1.73098467134841e-07 0.00337725690647487 5.8577741221427e-07 0.00205662604913438 7.42640788399942e-08 0.000556910765130714 0.00826453073538448 0.00513464041210555 0.00122636972004207 0.000830173174846839 2.12363362397448e-08 0.00651244224719355 7.08359443722195e-16 0.0400312110883336 0.0288999859769328 0.0341647499172587 0.0132283925724824 0.00530485627255988 0.00137068539905217 0.0225705857297645 0.0154351610632803 0.0230438600149518 0.0120124232346949 0.000491217006283489 1.71684846794637e-07 0.00716678701477369 0.00341722294906042 0.00957002735586988 NM_001191367.1 PRKAR2A Bos taurus protein kinase, cAMP-dependent, regulatory, type II, alpha (PRKAR2A), mRNA. 0.0 1806 99.90 0.210316628223946 NM_004157.2 PRKAR2A Homo sapiens protein kinase, cAMP-dependent, regulatory, type II, alpha (PRKAR2A), mRNA. 0.0 2237 86.65 0.390438247011952 TCONS_00127274_4 sp|P00515|KAP2_BOVIN KAP2_BOVIN cAMP-dependent protein kinase type II-alpha regulatory subunit; 0.0 517 100.00 0.996 1 coding 1 0 1 1 0.0897644502162086 0.414447870733407 0.0075526037694182 0.906337169544554 GTGTCCCTAAACATTTGTCTTCCAGAAGAGGATTTGGTGATGCGGGGAGAGAAGGAAATAGGAGCAGAGTTCCAATTCCTGGCAGATTTGATCGGCGAGTGTCAGTCTGTGCTGAGACCTATAACCCTGATGAGGAAGAAGAAGATACTGATCCGAGGGTGATTCATCCTAAAACTGATCAACAGCGGTGCAGACTTCAGGAAGCTTGCAAAGATATTCTTCTTTTCAAAAATCTTGATCCGGAACAGCTATCCCAAGTCCTTGATGCCATGTTTGAAAGGACGGTCAAAGTTGATGAGCATGTCATTGACCAAGGAGATGATGGAGACAACTTTTATGTCATTGAACGGGGAACCTATGATATTTTAGTAACAAAAGATAATCAAACCCGCTCTGTTGGTCAGTATGACAACCATGGAAGTTTTGGAGAACTAGCTCTGATGTACAACACCCCAAGAGCTGCTACCATTGTTGCCACTTCAGAAGGCTCCCTTTGGGGACTGGACCGTGTGACATTTAGAAGAATCATAGTGAAAAACAATGCAAAAAAGAGGAAGATGTTTGAATCATTTATTGAATCTGTGCCGCTTCTTAAATCACTAGAGGTGTCAGAGCGAATGAAGATCGTGGACGTAATAGGAGAAAAGGTCTATAAGGATGGAGAGCGCATAATCACTCAGGGTGAAAAGGCTGATAGCTTTTACATTATAGAGTCTGGTGAAGTGAGCATCTTGATCAAAAGCAAGACTAAAGTCAACAAGGATGGTGAGAACCAGGAGGTCGAGATTGCGCGCTGCCACAAGGGGCAGTACTTTGGAGAGCTTGCACTGGTCACCAACAAACCCAGAGCTGCTTCGGCTTATGCAGTGGGAGATGTGAAATGCTTAGTTATGGATGTGCAAGCATTCGAGAGGCTGCTGGGGCCCTGCATGGACATCATGAAGAGGAACATCTCGCACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCATGGATCTGATCGATCCTGGGCAGTAGGTGTGCCACACCCCAGAGCCTTCTCAGTGTGACACCAGAAACTTCCGGTCAGCCACAGAACACAAACAGAAGACATAACAGAACCGTTCATGCCGTTGCCACCGCCGCTGCCATTGCCATGGCCGTGGGCACTTAGAAAACCTGAAAGTCAGCACTAAAGGATGGGAGAGGTTCAACCCACACCTCCACTTTGCTTCTGAAAGTCCATTGTTAGACCACTCGTCACGATCACTCCAACCCAGTCTTCACATCTTTGGTTCCAAATGGCATGTCTCTCCAACAATTTAAGTGCCTGATACAAAGTCCAAAGTGTAAACATCTTCCTTTCCTCTCTTGCTGCTACTATGGCTTTTGAAAGTTACCACAGGTTGGCACAAACCTGTGGTGTAACTGTAGACACCTTCCTCCAACCTCTCTTAAGGAGGGACATGTTGTAGCCTTCCGTCTCCTCATCTGTCTTTGGAGAAAGTCCACATTTGTTCACAATTGTAGCCTTTTTGATTGTACCGTTTAAAGTGGTGGCAGATGTGATGGAGGTCTGTGGGCCTGTGGCACTGCACTGTCTGCTGACAGTGGCACACAACAGCTGTCCCCCAGTTCTCAGTGATGCTTAGGGAGAGGTCCTGCCCAGGGCCCAGCAGGTCAGCACCCCAGAGCTCACTGATCAGTCATCAGAATCCACGTTAGAGCAGAAAACTGGCGTTTGGCACATTCTTCAGGTAGCAGAGAGCCAGGGAAGGTTTTCTGGGTTGAGGGGTGTGTTTTCTTTTGTTTTAGTACATTTCTTTTCGTTTTGTTTAATCTCTGTGCAGTATGCATGAGTGGATTGCTGTCTGTCTATAAGGAGCCAGGGTCTGGGACTGCCATTGCTGTGTCTGACCTAAATATGTTCCTGGGCCACTCCTGCCTGTCTCGTTTCCAGTCGTTTCTACCAGCTGATGGCACTGTGCTGGCAGAGCCCTTCCCTTCTACTCCAGAGTGGTTATGTAGCTTTGCTGTTGAACCATCAGTTTTTAAACTCTTTAAAGAAAAAGCAGCTATCTTTATGGAAAAAAAAAATTTTTTTCCCTCTATTTAGAGAATTCCCCTTGCACATACTCCTTTATATCAGTTTGTCAGCTGACTCAAGCATTTATCCTAAAGATCAACTCTTTTTGTTAGTTTTAAAAAAGTTGATATCGTGTACAATTTCGTAGAATTACGGCAAAGACCTTTCTAATTAAGATGTTGGGATATTTGGGGTTCCAGTTGTTAATCCCACAGGAAAGTAACTTAGCTTTTTTTAACCTTTTGATTATATCAGGTAGAGTTCTGATGAATTATCATAATTAACTAGATATATTTCAGAATGAAATTTTTTTCTTCAGAATGACCTAGAATCAGATGTTACAAGAGATCCTAGGAGCAGTGTGACATTTACCTAAAGATAAATTTGGATGTCATAGCCATGTTTATATTAAATCAAGAGGCCCTTTCTGATATGAATTTTTTAAACTTGTATATCCCAGTGAATCCCTGGGAGATTAACATGCTGGGGCTCAAGTCATCCCTGTTGTAGACAGCGATGGAGCCCATGCAGTCACCATTGCCCTCTTAAACCAGGCTGTCTGCTTTTGCCGCAGACAGTATAGTTGAGAGATCTTTAGAGCGGCGGCTCATCATTGCCTTGCTCGGTTCTCCCTTTTCCTTGTTCTCCATGAAGTGGAAGCAGAAAGACTCTCAGTCGGCAGTCTGTGTTGCAGCTCTCAGAATTGGGAAAGGTTGTAACTAATACTCCAAAACCGGCAGCTAGCACCGGGAAAGCCTGTGTGGTTTTTCCCCATGATTTTCCAAGGTTCTTCTTTTGTATGGCATTGCTTTATTATCACATAAATTAAGAAAGCAGACATTGCACTTTAGCAGACAAGAGCCATGCCTGTCTCTCACGCAGGTAACAGGTACATTGGGCTTCAGGAGTGACGCAGAGATCTTGCCCCCAGACTGTGTAAGGACTCTGTGAACACGTGCCCCCTTACACCCCCCACCCTATCCCCGTGCCAGCATTAGTTAGGGCCAGCTGTGAATTCTGAGCCAGTCACTCCTGCAGGCTGCTAGGGATAGGACTTCTCGTCCTGCCCTCTTTCACATCCCAGTTCAGTCTTCCCCTTCATAGGAGCTCTGTGACACCCCCAGCATACTGACGGTTTCTGTTTTACAAAGTAGAGTTCATCAGGTTTAAGTCTTCCTGCTCTAACTGCAGATGGACATATGGATCATCAGTCCAGACCCTCACTGCCTTTAGGGCCCCTTGAGGGTCTGGCTTGAGGAAGGGAGTCAAGGGACCATTGTGAGTGAAAAGGACACAGCTGTTACCAAGGCACCAGGACCCTGACAGTGTTCCAGTTTTTCCTTACAGCACGGGGAGTCGAAGGCAGCAGATCAAGTTTGACTCTGGACTCTGCTGTCCACACCATGTTGTGCAAGCCCTGTGCTGAGAGCTGAGCCTCACGGGGAGGAGCATCTATTGGGAAGAGATCTTTGTGATCATTGTTTTATATCGTTCTCTTCTAGGATGGGTTAGAGCTTCATGCCCTCCGTTCTGGCTTTGCTATTGATTTTGCATGGTGGAGGTTGTTCCTGAGAGCCTTGAGGTCTAATCTGCAGTATTATTTTTCCCACTGGCCCCACTTTATCACACCCCTCACCCTCTTCTTTTGGTTGTATTCTCTGAAGGAAGGTTTCATCTTCCCTGTCCTCTTAATCCTTCATCCTTATATATTAATGTGTTATGTATGATTGCATAGATTCTCAGTAATCCAGGTAGAGCTTTTCTTTGAATGGTTTAATGAGTGAATTCAGCAGCAAAGTGTCAAGAGATGATTCTCCAGCCAGGAGAGGTACTGTTCACCCTCTTACTGCCCAGATTCTCTAGTCACAATGGTCAGTGAGGTGCCACTGGCGCCCAGCAGCCCCTGGACACACAGCATCTCCATGTCCTGTCATAGTGTACAAACAATCCTCTCATTTATGGAAATTAAAAGAGCATTTTTGCACAGAGCAAAAGGAAAAAGACCCATGAATGTCATCTTTTATATTTTATTTTCAGTTGGCCAATGTTGGAATTTTTGTTCTTGACATGCACTTGTAAACCAATCTCGCCAAGATACAAGTTGTTTTGGCTTTTCACTACAATTACCTCTTGTTGCTCCTGTCTTGACTGCTGACGTTGCTCAATGATTCTAATGTCTATTTTATGGGAAGCAGCCTTCCCATGGGTTTCCTTTTACATACTGCAGGGCTATCTTTATACTTCAAGGAAAAAAAAAAAGGAGAAAACTGTCACCAAACTCATGGGGGATTTGCAGAAAACCATTTAGGCCACCTTGAGTGAAAGGTAGATTCCTCATTGTTTTCCTGAGCTCATTGTAGTAAAAGAAATCTAATTCAGCATTATTGTGCTACCTCAAAGGTAAAAATGTTGTAAGGTCTTTTTGGTCCTGAGTTCTACACGTAGTGTTTGAAATGTCTTTCAATTGGAATTATTTTTAAATCATGGGGGAGGATCTTGTTTTACCTGTTTTACACTTGTATTTTAATCTCTGAAGAATAAGTGATTAGAAAGTAATCAATTCTTGCTCTGTAGTATTGAACATATACTTAAAATCATTGTTTGCCATAAAGAAGGTTGGGTTTTTTAAAAGGAAACTCTAGGGCTCGGCTTTGCTCTTGGTTAATAAAGGCTGACAAATCACGTCTGAATCTTTGGTG EMBV3_02263 TGACTTCTGCCTAGAGCCTCCATATACGGGTCCCTGCAAGGCCAGAATGATCAGATACTT Gene GeneID:404172|PTI:NM_001001554:820_cdna Constitutive 0 NULL GeneID:404172 13 GENE PTI BPI BPTI MGC148815 pancreatic trypsin inhibitor EMBV3_31922 ACTACAATCTGAAAGGCTGGGAAAGTAGAGCTGAAGCCCGTGAAGGAGGGAAATGAGGTG Gene BVT0102_407610 + 0 NULL GK000016.2:67499533-67600960 16 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_38867 GCTGTGCTCAAGATCAAATCTGCAACGGGAAGGCAAAAAGCATTTGGGACCTGTTCCTCC Gene GeneID:782341|LOC782341:XM_002697422:138_cdna Constitutive 0 NULL GeneID:782341 23 GENE LOC782341 NULL similar to seven transmembrane helix receptor EMBV3_36269 GGTGGAGTGTTGGTGTCATTCTTTTTGAAATGTTGGTAGGACAGCCGCCTTTCTTGGCAC Gene GeneID:535935|LATS1:XM_002690320:17_cdna UTR3_Alt 2 NULL GeneID:535935 9 GENE LATS1 NULL LATS, large tumor suppressor, homolog 1 (Drosophila) EMBV3_41768 GGTCAGCGCATTCACCTCAGTTTTTTGGACTTTGACCTTGAAGATGACCCAGCTTGCTTG Gene GeneID:493710|TNFAIP6:NM_001007813:64_cdna Constitutive 0 NULL GeneID:493710 2 GENE TNFAIP6 tsg-6 tumor necrosis factor, alpha-induced protein 6 EMBV3_08524 CACAAAAGGCTGTGTGCCCCAGTTTGAGAAGTGGTTGCAGGACAACTTAACCATTGTGGC Gene GeneID:538668|TSPAN5:NM_001076119:8_cdna Constitutive 0 NULL GeneID:538668 6 GENE TSPAN5 NULL tetraspanin 5 EMBV3_01658 TGGATCCTGGCACTGGCCGTGCTCAACTCGGCGGTCAACCCTATCATCTACTCCTTCCAA Gene GeneID:539534|S1PR4:XM_002688943:29_cdna Constitutive 0 NULL GeneID:539534 7 GENE S1PR4 EDG6 sphingosine-1-phosphate receptor 4 EMBV3_02897 CACGGTCCTCCTACCTGGCAGCTTCATGGATACTGTTTCTGAACCGAGGACTAGAGGTTT Gene GeneID:788927|LOC788927:XR_084577:84_cdna Constitutive 0 NULL GeneID:788927 13 PSEUDO LOC788927 NULL similar to elastin microfibril interfacer 3 EMBV3_24795 TGCACTCTGAGAAAGTAATCAAAATCCCTGGCCTGCCTGGAGTGTCGAAGCCCACCACTT Gene GeneID:785790|LOC785790:XM_002684985:86_cdna Constitutive 0 NULL GeneID:785790 1 GENE LOC785790 NULL similar to FLJ16641 protein EMBV3_26191 AAAGATCCGAAAGTCACCCACCTTCCAACAACCCAAAACACTGTGGCTCAGAAGGCAGTC Gene GeneID:616190|LOC616190:XM_002693104:494_cdna Constitutive 0 NULL GeneID:616190 15 GENE LOC616190 NULL similar to ribosomal protein L23a EMBV3_02902 ACCAACAGGGGTTTATGCAAATCCAGTTTCCCGAACCTTTCTACGATATACAAATCTGGA Gene GeneID:539347|C5H12orf23:NM_001034673:16_cdna Constitutive 1 NULL GeneID:539347 5 GENE C5H12orf23 C12orf23 MGC127570 chromosome 12 open reading frame 23 ortholog EMBV3_13411 CCCTCGCCTCTTTGCTTCCCACGTCCCGTACTATTTAGCACCAAAAGGTCTCAAGAACAA Gene GeneID:537919|SULT1C4:NM_001076097:25_cdna Constitutive 0 NULL GeneID:537919 9 GENE SULT1C4 NULL sulfotransferase family, cytosolic, 1C, member 4 EMBV3_07514 GGCAACAACTACGACGCGACCAGTGGCAAGTTTACGTGCAATATTCCCGGCACCTACTTT Gene GeneID:519675|C1QL1:XM_002696047:342_cdna Constitutive 0 NULL GeneID:519675 19 GENE C1QL1 NULL complement component 1, q subcomponent-like 1 EMBV3_42455 TTCTCCTTTCATACTTGTTAGGATTTGTCTTACATACTGCGGTGCTCCCATGTTGGGTGG Gene BVV0102_350351 + 0 NULL GK000004.2:6036681-6924641 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00189806 TCONS_00210178 TCONS_00010367 TCONS_00218852 TCONS_00032587 TCONS_00141355 TCONS_00088289 TCONS_00207228 TCONS_00031938 TCONS_00078532 TCONS_00073692 TCONS_00089425 TCONS_00116799 TCONS_00098385 TCONS_00177994 15 XLOC_115843 XLOC_128688 XLOC_005918 XLOC_132171 XLOC_018827 XLOC_085783 XLOC_053076 XLOC_125746 XLOC_018183 XLOC_047420 XLOC_045454 XLOC_054210 XLOC_070965 XLOC_058631 XLOC_107767 Coding TCONS_00098385 XLOC_058631 NonCoding NonCoding - 19:5561093-5568721 - TSS72761 7628 6 TCONS_00098385_12 120 0.998820136339801 1 0 0.000472619384593992 0.000590112042379123 2.48698695252058e-05 6.19364967480683e-05 0.000262146668812916 8.23029148281041e-05 0.00017655106870438 0.000519719701354573 0.000316005689189621 0.00267620150743071 0.00246585130508771 0.00166543058682877 0.0010389308090448 0.001820917924053 0.00190811198114119 0.000274005677828412 4.6791762896366e-05 3.93696793448302e-05 0.000109342062985342 3.42928136903365e-05 7.04630609765089e-06 0.000202023784082533 0.000510413535597794 0.000290760511169636 0.000117659439792513 0.000218954540986896 0.000321718724345108 0.00197050180976411 0.00142749961532966 0.00144453398084447 XR_229178.1 LOC100848861 PREDICTED: Bos taurus uncharacterized LOC100848861 (LOC100848861), 0.0 2349 88.75 0.234399580492921 XR_249081.1 LOC101929567 PREDICTED: Homo sapiens uncharacterized LOC101929567 (LOC101929567), misc_RNA. 9e-63 248 77.54 0.0431305715783954 0 noncoding 1 1 1 1 -0.035159203814033 0.811524793217013 -0.0117976042728863 0.847702564848601 ACTGGTCTATTGTATCATTTTAAGTTTGTGTTTTCTTGTTAATTTTCTGTTTAGTTGATCTATCCATAGGTGTGAGTAGGGTATTCAAGTCTTCCACTATTACTGTGTTATTGTTAATTTCTCCTTTCATACTTGTTAGCATTTGTCTTACATATTGCGGTGCTCCTGTGTTGGGTGCATATATATTTATAATTGTTATATCTTCTTCTTGGATTGATCCTTTGATCATTATGTAGTGACCTTCTTTGTCTCTTTTCACAGCCTTTGTTTTAAAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCTTTTGGTCCCTATTTGCATGGAAAATCTTTTTCCAGCCCTTCACTTTCAGTCTTGTATGTGTCCCTTGTTTTGAGGTGGGTCTCTTGTAGACAGCATATATAGGGGTCTTGTTTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCATTTACGTTTAAGGTAATTATTGATAAGTATGATCCCTTTGCCATTTACTTTATTGTTTTGGGTTCGAGTTTATACACCCTTTTTGTGTTTCCTGTCTAGAGAAGAGCCTTTAGCATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTAAAGCTTTTGACTTCTCCTTCATATTTGAATGAGATCTGTCATGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCGTGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGGAGAGAGAGAGAGTGAGAGAAAAGAGCGCACGCACGCGGGAGAGAGTCCGAGAGAAAGTGCTTTGGCTCCTCCTTTTATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTTAGCCAGGAATGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCGCCATTTTGGACTCCTTTTCCCTGTTCTACCTACCTAACATTCCCCCCTCAAGAGATGGGAGGCCCAATTCTTTGGGAATAGGGGCGTCGAGGTCTTTCTGGCTACTTCCTGCTGAACTGGGGTGGCAAGGGATATTGGGCCTCCCCCTCTTTCTAGTCTCAAGCCTCAGAGTCCTTATAGCGGTGTCCAAGTGTGTGTGATATTTTCTGTGGTCAGCTGTAGTTTTATATCTTTGTTGAACTGGCACTGCATGTTGTAGCTAGTTGACCTGGGCAGAGACAAAACAAGTTAGACAATTGACAGTACATGGAATAATCATAAGCATCATCAATATAGCATAACAAGGACTAGTAGGGACATTCGTCAATTTTAAATTCACATTGCCAGGATAGCTCAAGTCCCTCCTTATTCAGGAATCAGAAGATCTATCTCCTGTCTGTCTTGGAGTACAGTCTCTGTCAAGCTGTGTTGGCTCCTTAGAGTTATCCTGAGAAATCTTATCCCCAGAAACCAGGTTTTGGGGGTGTTCATTAGAATGACATTCATTGGTAGTTCTGAATAGGTATCTGAGATCTCCCAGGGGCTCACAGGTGTATTGAGTGTCCTCTTCTGTTTTTTTCCATGGCTTGACTCGTGAGTAGTGAATCCAGGAGTCATGTCCTGGTACCTTGACTGCAGTAGGGGTAGAAAGTATTACAGGGTAGGGGCCCTTCCATGTGGGCTGGAGTTGAGCCTTTGGGGACCCATCTTTCCAGACTTTAATTAGGACTTGAGTTCCTGGAGCATATAGTGGTGACTCTTTAGAATCTTTTGGGTCCTTGTTCATACCCCACAAGCGTATATCCTGTTGGAATTGCCCAATGGCCATGGTATAAGACTGGAGGGTCTGAATCTCTGGATCTAGGAAGAGGTCATTGACATAAACAAAAGGTCTCCCATATAGCATCTCATAAGGACTAAGACCAATCTGTTCCTTAGGGGCAATGCGGGTGCAGAAGAGAGCTATTGGTAAAGCCTCCTTCCATCCCAGGGAGGTCTCCTGGGTTATCTTTTTTATTGCTGATTTTAAGAATTGATTGGCTTTATACTTTTCCTGAAGATTGAGGCCTCCATGCACAATGGAGATAATAAGTAATGCCCAATGCTTTCGAGACTCCTCGGGTGACCTTAGAAGTAAATGATGTCCCATTGTCATTTTGTAATGACCTGGGCAGCCTTAGCCTTCTCGGTCCGGGTGGGAAAGCCTTCAATCCATCCTGTGAATGTATCTATCATAACTAATAGGTATTTATACCCTTGAGAAACTGGTATCTGGGTGAAGTTCATCTGCAAGTCCTCTCCTGGGTAGGCCCCACGTCGTTGGACGGGCTGGGCCAGCTGGGGTCTTCGAGCTCCTTGGGGGTTGTTTAATTGGCAAGTGCGACAAGAGGAGACAACCTGTCTTATAGTTGTTTGGAGGCCTGTTCCTCTGAAGGACCTTTCTAGTCATCTTTGGAGGGCTTTTTCTCCTAAATGAGTAGTGGCATGTAAGGAGTTAACCAACTTCCATTGGAGGTTTTCAGGCAGAAAAAGGAGTCCCTCCTTTTGGAACCACCCCATATGATCTTCTCGAAAGCCCTCGCTGTTAGCTTTAAGAGTCTCACCTTCAGTATATGAAGGAGTTTCTGGCAAATTAGTCTGTGGAACTAAGGTGGCAATCCCTATTAGGTCATGGTTCTGTAATGCTGCTCTCCTAGCTGCCTGATCAGCTGCTTGGTTCCCTCGTGCCACTTCCATGTTCCCTTTTTGGTGTCCTTTACAGTGGGAGACTGAAACCTCAGTGGGCAGATGGGCTGCCTCCAAGAGTCGAAGAATCTGATCACCATATTTGATTGGGGACCCTCGGGTGGTCAAGTGACCCCTTTCTTTCCAAACAGCCGCATGTGCATGTAGCACCAGAAAGGCATACTTGGAGTCAGTGTAAATGGCTATTCTTTTTCCTTTTCCCAGCTCTAAAGCTCGAGTCAGGGCTATGAGCTCAGCTAATTGGGCTGAAGTACCTGGTGGCAGAGGCTTAGCCTCTATGGTCTCAAAATTGGAGACTACTGCATACCTGGCTCTTCTTTTTCCATCCAAGACAAAGCTGCTTCCATCAGTGTACCAGATTTCCTCAGGATTGGTCAGAGAATCTTCTGACAATCCCTCTTGGGGTTTTGTCCAGTGGTCCAAGGTTTCTAGACAAGAGTGAAATGGAAGAGAGCCCTCGGGGGTAGGGAGGAGGGTGGCTGGGTTAAGAACCTCACAAGGGGATATAGTGAGGCCTGGATTTTCCATCAGCATTACATGATATCTGAGGGTTCTTTGATCAGACATCCATAAATGGCCTCTCCCATTTAGAAGTTGTTTTACTTGGTGGCTGGTAAAAATAGTTTGCCCCCAAAGGAGAGTTTTAAAGCATCTTCTATCATGATTGCAATAGCTGCAAGATTTCTAAGGCAGGGGGGCCAACCTTGGGAAGTTGGATCGAGCCTCTTGGATAAGTAAGCTACAGGCTGGGGCTCAGATCCCACTCCCAAGGTTATTCCCTCTCTTCCATGGACATAAAGTTGGAATGCTTTTTCTGGGTCTGGCAACCTCAAGGAAGGTGCCTGAGTTAAGGCCTGTTTTAGTGTAGCTTCTGCCTCCTTTTGAGGATTTCCCCACATCAGTGGGATTGAATCATCTTGTCCCTTTAAGCTTTCATATAAGGGCTGGGCAATTAGACCATAGTTGGGTATCCAGATTCTACAGTAACCAGTTAGCCCCAGGAAAGCTCGCAATTGTTTTCGAGTTGTGGGGGAGGGCAACTGGAGAATTCCTTGTACCCCATCAGAGGACAGCCTCCTGGACCCGTGTGTAATCTGAATTCCCAGGTAAGTGACCTTTGTCTCGACCATCTGTGCCTTAGTATGGGAGACTTTATATCCCCTTTCTGCCAAGAAGTTTAGAACCTGAATTACATGTTGTTGGGCGCTTTTCTCATCTGGAGAGCAGATTAGTAGGTCATCTACGTATTGTAATATTTTCCCATTAGGTCCCAGGTCCAGATCTAGGAAATCCCAGCTAAGGGCCTGTCCAAACAGGTGGGGGCTATCTCTGAACCCCTGAGGTAATACTGTCCAAGTCATCTGTTGGTGTTTTTCTCCTGGGGCCTCCCATTCAAAGGCAAAATGTTATTGGGATTCTTTAGCCAGTGGTATGCAAAAAATGCATCTTTGAGATCCAAGACAGTAAACCATTTGGCACTGGGTGGGATTTCTCCCAAGATTACATAGGGATTGGGTACTGTGGGATGGAGGGGGACTACAGCTTCATTTATAATCCGGAGATCTTGAACCATTCGCCAGGTTCCGTCTTTTTTCTTTACTGAGAGGATTGGGGTGTTACATGGTGAACTGGTAGGGACCAATAGCGCACAAGTAAGGACTTTATTTATTAAAGGCTGTAGTCCCTCCAGAGCCTCTCTTTTGAGAGGGTATTGTTTCCGGTTAGGAAACCGAGTGGGATCTCGGAGGACAATGATGACCGGTTCAGCTTGGTGGGCTCGCCCAGGAATCCCCTGGTCCCACACCTGGGGGTTAATTTTGTCTTCCCATAGTTTTTGGTCCCTCTCTATTGAAGGTGTAATGGGTTCTTCAGTAGTAACCAGGAGCTGTAGAGCTCTAGGGGCTGAAAAAGTTCCCATCACAAGGGTGGTACCCAGTTTAGTGAGTATATCTCTTCCCAATAAGGGGATAGGACACTCAGGGACCACCAGAAACTGGTGGGAAAATATTTATCCATCCCAGCAACAAAGAAGTGCTTGGGTGAATCTTTTAGTAGTTGCTTTTCCTGTAGAACCCAAAATGGTACAGGTTTGGGAGGAGAAGGCTCCGGAGTAGGAGATCAAGACAGAGTAGGTAGCCCCTGTGTCAGCCAAGAAATTCTCGGACCTACCTGCCACATCCAGTTGCACCCTTGGCTCCAGCCCCGTGATGGTCATCTGTGACAGGCGGGCTGGCTGGAGTAGGCCGCTTCAGTCCTCTTGAACCATAGTGAGGGAAGGCTTGGCACTTGACCTTGAGGCTCTTGGGTCCCGAGGGCAGAGTGCCACCTAATGTCCCAGTTGATGGCATTTGTGGCAAGCTGTTCTAGGAGACTTGTCACGGTTTGGACACTCTTTGGCCCAATGCCCCACCTGTCTACAGATCAGGCATCTATCTCGTGCCTTGTCTCTCAAGGACTCAGGGTTTGCCATAGGGCTTCTCTGGAGGGCGGCCAGCATCTGGGCATGCCTTGTCTCTTTCTTTCTCTCCTTCTCCTGGGCCTTGGCCTCCTTCTCCTGTTCCCTGTTATAAAAGGTATTGGTGGCTGTCTGGACCATCTCATCTAAAGAGGCAGCAGGGTCCTGCTGTTGTAGTTGCTGTAACTTAATTCTGATATTTGATGCACATTGGGACAGGAATTTGTCCTTTAAAATCACCCGTCCCTCTTAAGAGTCTAAGTCCAGGTTGGTAAACTTTTGGATGGCCTCTTTTAGCCTCTCCAGAAAGGCAATGGGGTTCTCACTGGGCTCCTGAGTTATTGCTGAGACTGGGCACAGTCCCACAAGTAGTAGGCTTTTTTTATGTTTCCATGGGTGGACTTCCTTAGGGAAGTCTTTCTAAAGCTTATCCTACCCAGAATGGTTGCAACCTGAGAGCCAGGCGTCCCTGGGTCAGGGTGCAGATCCCCAGGCAGGCTGAGGCATGACAGCCTCCTAGAGATCCAATCCCCGGGCAGGTTGAGGCGTGACGGCCTCCTGAGAATTGGGTCTCTGGGCAGGTTGAGGCGTGACAACCTCCTGGGACCCCTGGACTAGAGGATCCCCGAGCAGGTTGAGGCGTGACAACCTCTCAAAGACTGATCCCTAGGCAGGTCAAGGCGTGATGACCTCCTGGGACCCCCCGGACTGGAGTTTGGGCGTCCCCAAGATCTCCAGTGTGACCAATATTGGGTAGGATTAGGGGTTGGATATTATAGAGTATTTCCCTCCCAAGGCATGAAACAGGAGGGAAGGGGGCAGAGCACAAACTTTGAAAGAATGACATAAACCAATTAAAATCAATTGAGTCCAAGATGACAAGTCAACTTCAAGTAAACCTTAATCCCCAATCTATAAGCCAACAGACACACCCAGAGGTGGCAGGACAGCTCCAAGGCACAAGATCAGAAGAGGGAGAAGTGGGTGGTTCCCCAATGGCTGGGATGATCCTCTCACTCATTAGCATATGAATTCCATCCCCTCACAAAACCTAGCCAGGCCTAATACCATGGCCGCAGCCCTTGCCCTCAGCAATGGTTCACACCCTGAAGAGTGGCTTCTCTCTGGATCCTAACAAATCTACCTCTTATCGCTTTGTCTCTCAATGAATTTTTGCAATGAGACACCAGAGCCTGAATTTCACTAGTTTTGGCCGGGCTTGAGTCCCGGGAGAGAGCTGAAGGACAGGAGGAAAAAGCAGTGGGAAAAACATGCCAAGGAATCCCCTTCATAGCCCGCTGGAAAATTTGCTGAATATCTGACCGGTACTCACAGTTTCATTGGTCTAATCTTTGGCACAGAGAAGAGAAAGGACAGAAGAACCCCACCGGCTTGTGTAACAGCTACTGAGGCTCAGTAGATAGCGCCTTTGGGACATGCTGAGGAGCAGCCTCTCCCGAGTCCCTCAATTGTGCCCCTGCCGCCTGCCTGTTCGCAGGAGGTTCGAGGAAACAAGAAATGAGAGATTGTAAAGGTCCCTCCAGCCATAGGAGCGAGGACCTCTTACCTTAACCGGAGGTCTTCTGGAATCTGAGACTGGGCCACGTGAGCTTTCTGCTGAGTTCGTTTTTCGCTGTCCCGGTTTCCAGCACGATGGGCCTTCCCCTGCTCTGGGTTTCTTCGTCTTCTGCTTCTAGCGCGGGAACTTCGCTGAGTTGGGCTCCTGCTGTGCTTGGCCTCTTCCGCGAGGAGGTTGTTTCAGCCAGGTTAAATCCGAGTCACGGCACCATAGATGTCACGCGAGTGTATGTTCCTCGGTTCTTTGTCTCGTCACAACAAAGATTTGGAGTGATGGACATTAAAGCCCTCGGCGCATCACAGCTCTTGGGTCTTGGACAAACCATGCTACAGCTGTTAGGCAAATCAGTGTTACAGCTCTATTTTATTTAGAAGATAGCAGGAGAGAGGGAGAGAGAGAGAGAAAGAAAAGAGTGCACGCACGCGGGAGAGAGAGTCGAGAGAAAGCGCTTTGGCTCCTCCTTTTATATGTTTTTTGCCTCCACCTGGGCCTGCCCTATGCAAATTGGGCTCAGCCAGGAGTGCTGTTTGTTCTGTTTGTTCTGCCTGAAGTCTTCACTCTGGTCCTTGGACCTTCCTTGTCTTTTAGCCACCACCATTTTGGACTTCTTTCCCCTATTCTACCTACCTAACAGATCCTTGCTGGGTACAGTAGTCGGGGCTGTAGGTTATTTTCTTTCATCACTTCAAGTATGTCCTGCCATTCCCTCCTGGCCTGAAGAGTTTCTATTAAAAGATCAGCTGTTATCCTTATGG TCONS_00092057 . 3' 38382 TCONS_00092057 . 3' 46009 EMBV3_39341 TTACACGAACTCCAAAGAAACAATGCTGATAAGTGCCATGGTCCTCCTGATGCCCTCGCC Gene BVT0101_048628 + 0 NULL GK000019.2:25329517-25337349 19 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00095954 TCONS_00095957 TCONS_00095956 TCONS_00095953 TCONS_00095958 TCONS_00095955 1 XLOC_057842 Coding TCONS_00095957 XLOC_057842 Coding Coding ANKFY1 19:25333932-25403237 = TSS71415 7565 1 TCONS_00095957_6 1158 25 0.89120397091077 0.00247057780639143 0.00253922170748979 0.00180419933403743 0.0025346631659774 0.00100762786117845 0.000346808860169747 0.000937725618327107 0.00168112341447691 0.00169945423163844 2.15373412422123e-06 5.41502847531401e-05 6.92567029453672e-05 0.000271314186524984 0.000268068426926768 0.000168710477242585 0.00249361530166465 0.000279112335186441 0.0015232559775687 0.00294290156280062 0.00225178157034319 0.00121368053265941 0.0008304837124655 1.06926974921784e-05 0.00180932057185395 0.0030108097141722 0.00387360914669906 0.00225394846557339 0.000120222525676534 0.000222553252152807 9.69377381514503e-05 XM_002695758.3 ANKFY1 PREDICTED: Bos taurus ankyrin repeat and FYVE domain containing 1 (ANKFY1), transcript variant X1, mRNA. 0.0 1.363e+04 100.00 0.99960343688037 NM_016376.3 ANKFY1 Homo sapiens ankyrin repeat and FYVE domain containing 1 (ANKFY1), 0.0 6565 81.40 0.888962326503635 TCONS_00095957_6 sp|Q9P2R3|ANFY1_HUMAN ANFY1_HUMAN Ankyrin repeat and FYVE domain-containing protein 1; 0.0 2247 94.11 0.999136442141623 7 coding 0 0 0 0 0.00269887455289222 0.981772290808864 0.018776707574953 0.696025988251239 GGGCCGGGCCCGACATGGCGGAAGAGGAGGTGGCCAAGTTGGAGAAGCACTTGATGCTTCTCCGACAAGAGTATGTCAAGCTGCAGAAGAAATTGGCAGAGACAGAGAAGAGATGCACTCTTTTAGCTGCACAAGCAAAGAAAGAAAGCAGCAGTGAGTCCTTCATCAGCCGCCTGCTGACGATCGTGGCCGACCTCTACGAGCAGGAGCAGTATAGTGACTTGAAGATAAAGGTTGGGAGCAGGCACATCAATGCCCACAAGTTTGTCCTGGCGGCCCGCAGTGATAGCTGGAGTCTGGCCAGTTTGTCTTCCACCGAGGAGCTGGACCTGTCAGATGCTAACCCTGAGGTGACAATGACAATGCTTCGCTGGATCTATACGGATGAGTTGGAGTTCAAAGAAGACGATGTGTTCCTGACTGAGCTGATGAAACTAGCTAATCGGTTTCAGCTACAGCTCCTTAGGGAGAGATGTGAGAAGGGTGTGATGTCTCTGGTGAACGTCAGGAACTGTATTCGCTTCTATCAGACTGCAGAGGAGCTGAATGCCAGCACATTGATGAACTACTGTGCAGAAATTATTGCAAGTCACTGGGATGACTTACGGAAAGAGGACTTCAGCAGCATGAGTGCTCAGTTGTTATACAAAATGATCAAGTCCAAGACCGAGTACCCATTACATAAAGCTATCAAAGTAGAGAGAGAAGACGTGGTCTTTCTTTATCTAATTGAAATGGACTCACAGCTCCCCGGGAAACTGAATGAGTTGGATCATAACGGAGACCTTGCATTAGATCTAGCCCTTTCCCGACGTCTGGAGAGTATCGCCACCACGCTGGTTAATCACAAAGCTGACGTGGACATGGTGGACAAGAACGGCTGGAGCTTGTTGCATAAAGGAATCCAAAGAGGAGATCTCTTTGCTGCCACTTTCCTCATTAAGAATGGGGCCTTGGTCAATGCTGCCACATTGGGTGCCCAGGAGACACCATTGCACCTCGTCGCATCGTACAATTCAAAGAAACATTCGGCAGCTGTGATGTCTGAGATGGCACAGCTCACAGAGGCCCTCCTGCAGGCTGGTGCGAACCCCAACATGCAGGACAGCAAGGGCAGGACTCCCTTACACTTGTCCATCATGGCCAGGAATGAATACGTGTTTAATCAGCTGCTGCAGTGTAAACAGTTAGATTTAGAGCTGAAAGACCACGAGGGCAGCACAGCTCTGTGGCTTGCCGTGCAGTACATCACTGTGTCTTCCGACCAGTCCGTAAACCCCTTCGAAGACCTCCCTGTGGTGAACGGGACTTCATTNNGAAAGAATGAATATGCCCATTTTCTCCTAGGAAATTGCTTACTACAGCGGGCAGCTGAAGCAGGAAATGAGGCAGCAGCTCTTTTCCTGGCAACCAATGGTGCCCACGTCAACCACAGGAACAAGTGGGGAGAAACCCCGCTGCACACAGCCTGTCGGCATGGCCTGGCCAACCTCACTGCAGAGCTGCTGCAGCAGGGGGCCAACCCAAACTTGCAGACGGAGGAGGCCCTGCCGTCCCCAAAGGAGGCCATGTCCCTGCCCAGCTCAGCGGACAGCAGCGTCTACCTGCAGACGCCCCTGCACATGGCAATTGCCTATAATCATCCAGATGTGGTGTCTGTCATCCTGGAGCAAAAAGCTAACGCTCTTCATGCCACCAACAACTTGCAAATTATTCCGGACTTCAGTCTCAAGGATTCTCGAGACCAGACTGTGCTGGGCCTGGCATTGTGGACTGGCATGCACACGATCGCAGCACAGCTGCTGGGCTCCGGGGCTTGCATCAATGACACCATGTCGGATGGACAGACCTTGCTGCACATGGCCATGCAGAGGCAGGACAGCAAGAGCGCCCTCTTCCTCCTGGAGCACCAGGCGGACATAAATGTCAGCAGGACTCAGGATGGGGAGACAGCCCTTCAGCTGGCTATCAGGAATCAGCTTCCCCTCGTCGTGGATGCCATTTGCACGCGAGGAGCTGACATGTCTGTGCCAGATGAGCAGGGGAACCCCCCGCTGTGGCTTGCACTGGCAAATAACCTGGAAGACATCGCATCCACTCTGGTCAGGCATGGTTGTGACGCCACGTGCTGGGGCCCAGGGCCGAGCGGCTGCCTGCAGACGCTGCTGCACAGAGCCATCGATGAGAACAACGAGCCCATCACCTGCTTTCTCATTCGCAGTGGCTGCGATGTGAATAGTCCCAGACAGCCTGGTGCTAATGGGGAAGGAGAGGAAGAGGCCAGAGATGGGCAGACCCCTCTGCATTTGGCAGCCTCCTGGGGGCTGGAAGAGACAGTCCAGTGTCTTTTGGAGTTTGGTGCCAATGTAAATGCACAGGATGCAGAAGGAAGAACGCCTGTCCACGTGGCCATCAGCAACCAACACAGTGTCATCATTCAGCTGCTGATTTCTCACCCCGACATCCACCTGAATGTGCGAGACCGGCAGGGCCTGACCCCCTTTGCCTGTGCCATGACCTACAAGAACAACAAGGCGGCCGAGGCCATCCTGAAGCGAGAGTCCGGGGCTGCCGAGCAGGTGGATAACAAGGGCCGGAATTTTCTGCACGTGGCAGTTCAGAACTCTGATATTGAAAGCGTCCTGTTTCTGATCAGCGTCCAGGCGAACGTCAATTCCAGAGTCCAGGATGCTTCCAAGTTGACCCCTTTGCACCTTGCTGTCCAGGCAGGCTCTGAGATTATTGTCCGCAACTTGCTTCTTGCAGGTGCCAAAGTGAATGAATTAACCAAGCACCGCCAGACCGCCCTCCACCTTGCTGCCCAGCAGGACCTTCCCACCATCTGCTCAGTCCTCTTGGAGAATGGAGTGGACTTTGCTGCTGTGGATGAGAATGGAAATAACGCTCTTCATCTTGCTGTCATGCATGGCCGACTCAACAACATCCGGGTCCTCCTGACAGAGTGCACCGTGGATGCTGAAGCGTTTAATCTACGAGGCCAGTCACCACTGCACATTTTGGGACAGTATGGCAAGGAGAATGCTGCAGCCATCTTTGATCTCTTCTTAGAGTGCATGCCCGAGTATCCTCTGGATAAACCAGATGCAGAAGGAAACACAGTGCTGCTCTTGGCATACATGAAAGGGAACGCCAACCTGTGCCGTGCCATCGTCCGCTCGGGGGCCCGCCTGGGGGTGAACAACAACCAAGGGGTCAACATCTTCAACTACCAGGTCGCTACCAAGCAGCTGCTCTTTAGACTGTTAGATATGCTGTCCAAGGAGCCTCCGTGGTGTGATGGCTCCAACTGCTACGAGTGCACTGCCAAGTTCGGAGTCACAACGCGCAAACATCACTGTCGTCACTGCGGACGTCTTCTTTGCCATAAATGCTCGACCAAGGAGATTCCTATTATAAAGTTTGACCTGAACAAGCCTGTGCGAGTTTGCAACATTTGCTTTGATGTCCTGACTTTGGGGGGAGTCTCTTAGTGAGCCCCCAGGAAGGTCCAGGCCACATCCTCAGTCGCTCCCCAGCAGCTGCTCTGCTCACCAGCCTGACCCCACCCAGAGCAGGAGCTGGCCGTCGTCTTCCCGCGGCAAGAGACTGGAACAGTTGTGGACCAGGGGGGTAGATCCCATTTCAGATGATGCTGTATGATTGTCAGTGTGTCAGACCATGATCGAGGTCGCTAGGTGTCTCACTAGTCGGACCAGGCCTTTTAGCCTAAGTGGTAAATACGATAGGAATTAGACCCCATTCTGCTAGCAATGTACAAGGACACTTGAAACCCATGTTCTCTTCCAGTAGCTTAGTGTCCATCTCAGAGCATTCATGACGTCTCCTGCCTGGGCGGACTTCCCAGTCTGAGCCTGACCGTAGGAAGCCGGTGTCTGGCTGCCCAGCGAGAGCTGGCTCTCCTTTGGGGTGAGTGGCTGTGGACTTCTCTGCACAGTGTTTCCGTAAAGGTAAATAGGATCCTCTTGGCCTGAAGTCTCTCACTCTTTTTTTTGTTTTTTGGAAAAGCTAAGCTGTATTTTTAGTGAACTACCCCTTTAAAAAAGGTGAAATCTTTCTAAACAGGGTTCAAAGATGAGAGCTGAAAAATTGTGGCCTTAACAACTGAAAGCTTTACCGGTATTCATACTACTGGGGTGTCCAACTGCACTCTGGCAGCTTGACACCTCCTAGCAGCCGTCTTGTTCTCTCCTCTTGCCATGTCCTGTCTGTGGAGTCCTCAGTTACCTGCCGCTAGGCAGTGGTAGAGAAAATGCACTTTTCTTGTGCTGCACTTTTTATATAGCTGCATTACTGGTGATTCCAATCTAAAAATCCATATTCAAAAATACCCTCACATATCTGTGCATCAGTGATTCTACCAGTCAGCTTTGACTGGACCTCAGCTCACACTAAGTCTTAAACGGAAAACTCCCTCGGAGTGTCCTTTGGAGCAAGAGAGTCACACGGGGCCAAGTGAGGAGAGGGAATCTGCAGCCTCAGACCAGCAGGTCCCATCTCCTTGACATGAGTGTTTCTTGCTAAAAACCTTCCCAGTTACTCTGTGAGCACCCCAGAGAGGGTGCCTGGGTCCCAGCTCTGCGTAGGTTCTTGATCTGCCCTGTGAGAGCCACCAGCCAAAGGCCCTGGCCAAACGTGTGACCCCGTTTTGGAAGGCTCATGTGCTGATAAAGCCCCCGGAACCTGTCAGGCCTTAGTCGCTGCTAGTACATATATATTAACCCTGAGGTGTTAAACTTCTTTTCTCTTATGAAGGTTTGGCCAGTTTTTTAAAAATGCACATTTAGAGAGAAACTTATACCACTGCTTTGAAAAAAAGAAAAACACTCTGAGATGAACAATATGTGTTGTACAGCTATACTCAGAGATTAACAATCTCAATCATATATACTGTTTTTTTCAGACATTTAGTAACCACTACATTTTTTTTTTTTTTTTTGCATTAATGAAGTGTGCATATATGTGTAAAAGGGACTAAATATTTTTTTGCAGCAGTCTGTTTTTTTTGTTTGAATAGTGGGTATGTCCTCCATGTCACTGTAGAATTTATACATCCTGTTGCCTAAATATGTGTGTAAAATGAGCTGATAAACCAGAGTGCTACTTTTTTTTAATATTTCTGTGATTTATAAGATATATATGCTTTCTATGTTAATATGAGCTTGTGCAGTGTTTCAAAGAAAAAAATTAATTACAAGAGTTCCCTATCCCCCAAAGTCTCTGACCTATTTCATACTGAATTTTTCTAGAAAAACAACTGGTCTTGGCAAACACCTGACCATGTGGAGCATGTGTTCAGTTTCCATTTTCTGTTGCTTGAACAGGGCCTGAGTAAGTAGGCCTTAGTCGGGTGGTTTGATTCTGTCACTGGAAAGTAAGGCAATTATGCTTCAGTTATGAATCGAGGTGTTCGGTACTTTTATCCTGTTCTTTCACCGTCCGTGGTGGAGAGAGGAGGATGGAAATTCAGTGAGGGATGAGGCTGGTTGTCCTGCCCCTGTCGTAATATACCAATCTTAGTAACAATCCTGCCTCTAACTGCACTCTAAAAAAAATCTTATAATCATGTCTGAAGTTGTCAAGCTTGTTTACCTTCACAGAGTCTAGGGACAGTGATGGTACTTAGCCTCCACGGGTTGGGGGGAACGTTCTGTGAGCTCTGTTCAGAGTGCATTCTTGTAGATCTAGAAGAAGCACCTTTCCATAGTCTTAGGCTCTCCCTGGCTCTCCCGATGGGCGGGAAGGCCACACTCTCAGTTCCTCGCGTGGTGGCTGCTCTGGGGGGACTCAACATGCTCTTGGTCCTCTTTGTGTTCTCCAAGCCATCGAACATGACTCTAGAACAAACTGCCTGGCTGTTCTTGTCACAATTTAATCCATAGCTTAAAGCTCAGTTTTATTCATTCAGAAAGTTGCCAGTTGTGGGTGAGTAGAGCAGGAAGACTAAACTTGATTGAAATATAATTTGCTTCATCAGTCAACATTGTTAACTCTAAGTTAGCTTTTTAACTGCCGCTTGCTCATCAGATCTGAGAGACAGTGTATTCTTACATCATTTTTTTTTTAAAGATGAAGGTACAAACTGTGTCTATGTTTAAACAGAGTGGCTAAAACTAACTTGCTATTATCCTCGAATACAGGAAACTTCCCACAAACTTAAGTGCCTGCGTTTAGGACTTCTTAATTTCCAGTTCTTTTTAGTGGTGTCTCACTGAATGACATGTTAGAATGTGTGTTCTGTCTGGAGTTTGTTGCCAGTGTGTTGTCAACCCCAGTTACCGATTCAGTTGAGGCCGGATTAGATTGCCCAGTTCACCTGCCTCTCTCTCTCCAGGAGTGGGGGTCCACATGACCGCTGGCCCTCTACCTCAGAGCCCTGAGTTGTTTGTGACCACCCTTGTCAGCATCCTCACTGCTCCCCCCGAATGGGCTCCTCGCGTGGAGCTCAACGTGCTGGTGGGTTCACTGCCACTCCTGGTTCATGTCTCCCACCTGTCGTATTACACGGGTTGTGCTCATCTTATCCATAAGCAGGAAGTGGACGAAAAGCCTTGGGACAGGGGAGAGCCTTGATCTCCATCTCGGTTTTGATTTATTTTTAATCTGGAGGAGAAAACCCGATTGAGCTATGTAATGATTAGATCTGAAAGGCAAACTCACTCTGCATGTGACAGCAGCATGAGCAAGTAGGTGGGATGCTTCCGTGACAGCCCCGCCTGGAGCTCGCAGGTTGAAGCTATGAGGGAGCTCGTGAGACAAGCCTGCTTCTGGGACCTGGGCTTGCTCCCCTCAGGACCAGCCCCAGGAGAAGTGGGCACGGAACTGGCAAGCCCAGCCCCTTCGAATCTGAGCACCAAAGCTCCCCACGCCCAGCCAGGGAGAGGAAGAAGCCGAGGGCAAACAATTTCCTAAAGGGGTTTGGAAGCCACGTTCTCATTTTGTGGAAGTAATTCAGTGAAGAGCTGACTTATTTGACTAAAACACTTACTAAATTTCCAGAAGTTATCATAGATGCCTTAAGGACTTTCTTTGAAAGATCATTCATTATACAGTTACTTTTTTGTGTGGCATAAACAATATACTAACTTCTTAAAACAGACAGTGTTGGTGTTCTGTAGCTAGGGAGTCTTGAGTTGGCAGCCTGCTCAACTTAATGACTTAACATTGTTTTTTGGGCAGATGCGTGGAGTTGGCTGTTACCACGACATACATCCCTGTGTGCTCTACCAAGGGGGAGGCCTGGGCAGAAACCGCAGGCACATGTTTAGGTTGGTCACTTTGGCTTCCAAGCCATTCCAGGTGGTGGTCAGTGTGGGGCGAGGGCATCAGGAGGACCATGGCACTTATCAGCATTGTTTCTTTGGAGTTCGTGTAATGGAATGTATTTTTCAAATATTGATATTTGCATTTTATGTAACAAGTCCTTATAAATAAAATGAGGTAAAATTGTGCATTTAAAGTGGAAACCTTAATAACATTTGTAGTTCCTTTTAATGCAAAAAGTACCAATAAGAATTAAAAACAAATACACAAATTTTTTTTAAACT EMBV3_16838 AGGCCCTGTTTCCAGTCCTTATTGCTTTAACGTTGACTTCAGGCCCGTAGACCCAAGTGC Gene GeneID:539364|BTG2:XM_002693879:170_cdna Constitutive 0 NULL GeneID:539364 16 GENE BTG2 NULL BTG family, member 2 EMBV3_26804 CTGTGTTGCTCTCCCAGCCACCCAACCTGGGGTCCCTTTAACTCTCATATTCATATTCCT Gene GeneID:539337|WNT10B:XM_002687290:191_cdna Constitutive 0 NULL GeneID:539337 5 GENE WNT10B NULL wingless-type MMTV integration site family, member 10B EMBV3_40067 GCTGCACAATGAGAGGTTTAATGGTATTGACCGGTGTTACGGACGAAGATTATGAAGGGG Gene GeneID:100297662|LOC100297662:XM_002693557:213_cdna Constitutive 0 NULL GeneID:100297662 15 GENE LOC100297662 NULL hypothetical protein LOC100297662 EMBV3_15499 AATTGGGTAGTGGGAGATGTTTTGGAGAGGAAGTGTTCCAGGCAGAGGAAAAAGTTAGGC Gene BVV0102_019272 + 1 EMBV3_12128 GK000003.2:57391309-57410643 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00173520 TCONS_00173521 1 XLOC_104372 Coding TCONS_00173520 XLOC_104372 Coding Coding SH3GLB1 3:57408088-57457635 = TSS128968 3895 1 TCONS_00173520_2 259 0.11219512195122 8 0.921547652686392 6.09468610195258e-06 4.20137987283729e-05 1.97822963142335e-05 2.54358101903921e-05 0.000101464577494038 2.07763612773573e-05 0.000178277563331735 7.12750260216174e-05 0.000143759741140174 3.08018971677657e-06 5.30097242689874e-06 4.17306281861798e-25 9.97864157713906e-05 0.000174626400446206 6.1373610555351e-05 0.000606365369438061 0.000340464960422131 0.000662201824094413 6.67472970048246e-05 2.62747371296815e-05 2.27766774414186e-05 0.000117597467698486 0.000349814866862587 0.00056576672640761 6.0167273340516e-05 8.7149691352861e-05 5.20935163809976e-05 5.50619254736818e-05 0.000166787981541818 0.000109651261164483 NM_001077993.2 SH3GLB1 Bos taurus SH3-domain GRB2-like endophilin B1 (SH3GLB1), mRNA. 0.0 1647 99.89 0.234916559691913 NM_016009.4 SH3GLB1 Homo sapiens SH3-domain GRB2-like endophilin B1 (SH3GLB1), 0.0 1449 93.63 0.244929396662388 TCONS_00173520_2 sp|Q32LM0|SHLB1_BOVIN SHLB1_BOVIN Endophilin-B1; 0.0 528 99.22 0.984555984555985 2 coding 0 0 0 0 -0.702400715697254 0.107466751442323 0.0107782619134426 0.854703121957687 TCGCTTCCTCGGTTGGGGACCCGGCCCTGAAAGGCCAGGACGCTGCTCTGTGTCTCGCAAGCCCACCGCGAAGCCCGCCGACGTTAGCGGTATCTCTCCAGGCGTCACAGGCCCTGGGTCTCGGCCGCTGCCGCCTGGACGCGCGGCCGGCTTCGAGGCGGTTGTTCTCTCCCCTCGCCCCACCCTCTCTCTCCCCCTTCACGGAAACGACAGCTGCGGCGGCGAGGCTGGCGCCGCCTCCCTCCACCTACCACGTCTGCCCCCGCCACTCTTGCCCGGCGCCCCAGCCCGGCCGCGGCGCCTCCATCTCCCCGCTAGGTCAGCCGGCTGCTCCGTCCGGCTGACGCCCAGGATGAACATCATGGACTTCAACGTGAAGAAGCTGGCGGCCGACGCGGGCACCTTCCTCAGTCGTGCAGTGCAGTTCACAGAAGAAAAGCTTGGCCAGGCAGAGAAGACAGAATTGGATGCTCACTTAGAGAACCTCCTTAGCAAAGCTGAATGTACCAAAATATGGACAGAAAAAATAATGAAACAAACTGAAGTGTTATTGCAGCCAAATCCAAATGCCAGGATAGAAGAATTTGTTTATGAGAAACTGGATAGAAAAGCTCCAAGTCGTATAAACAACCCAGAACTTTTGGGACAATATATGATTGATGCAGGGACTGAGTTTGGCCCTGGAACAGCATATGGTAACGCCCTTATTAAATGTGGAGAAACACAAAAACGAATTGGAACAGCAGACAGAGAGCTGATTCAAACTTCAGCCTTAAATTTTCTCACTCCGTTAAGAAACTTTATAGAAGGCGATTACAAAACAATTGCTAAAGAGAGGAAACTATTACAAAATAAGAGACTGGATTTGGATGCTGCAAAAACAAGACTAAAAAAAGCAAAAGCTGCGGAAACTAGAGCATCATCTGAACAGGAATTAAGAATAACTCAAAGTGAATTTGATCGTCAGGCAGAGATTACCAGACTTCTGCTGGAGGGAATCAGCAGTACACACGCCCATCACCTTCGCTGTCTGAATGACTTTGTAGAAGCCCAGATGACTTACTACGCACAATGTTACCAGTACATGTTAGACCTTCAAAAACAACTGGGAAACTGGCCTTTCTGCCAATAAAATTGCATGGTAAATATTTCATTACAAAAGTTACGTTAGAGCTTTCATGCCAAGAATGTTTTGTTACAAAATTCTCTTTCTACTGAGGTTTCACTAATACGTACCTTCTACTTTTGAACCCCAAATTAAAGCAGAAGAACTGTTTTCTACTGGATTTTTCATTAATGGCAAGCTTTTTCTTTTATGTAAAATAAATTTATTGTGAATTGATATCAGTGACTCATTTATTAGGTATAATTAATAGCCAAAGAATAAAGTTAAAATTTGTTTTTAACTTGGTTTAAAAAGAGCTCTAGGATATAAACCTCTTTTGTGAAAAATAGAATGTTTCTGAATGTTTTCATAAACAAAAACTTAGTTATACCATGTTTACCTTATTTTCCAGCAGTTATTAAATGATGACAATATTCTGTTTCAGTGAGTTATTTTGAGGGCTTTTTATTAAACACTACTGAATGATTTATTCTAAGACTAACTAGTCCTCAAGAAGTATTACTGTATTTCTCTAGTACATTTGCAGTTAAGGTTCTAAATCATCCGGGACAAACTCAATTTACTGAACAATGTTTCTAAGGTTGTTCAGTTGGCACCATTTAATCCATAATCAGAATTGGATGTGTTAAGATATTGTAATACAGTAAAGAGAATTTGTCCTTATTCAACAACAAATCCTTATAAAAATATGGATTTGCACAGCTGTGTTTGTTATAGAGTAAATTGTACGCAAACAATATACTTTTGGTTACTTTAAGCCTACAAATAAATTTTAAAAATTTACTAATGAACTTAGGTTATCCTAATCAGGCTCTCTAGTTCACACACTAATGAAACAATTAGTAATATACTTGGAATCAGAAAATTGCTGTGTGGGCTATTTCTATGAATCAGCAGATTGTTTCCATGTCAGGACTTCTGCTCTTATTTTCATTCATTCATCAAACATTTGTTGGGTGCTAGGCACTATGCTGATTAGCTTGGAATACGACCCTGACCAAGATGCACCAGATTCTTCCCCTTACAGATCTTAAAGACTGGTAGAGAATACAGAAAAATAAGGAAGCAATGGTCATATAACAGCACCAGTGTCATGATAGAAGGAAAATGCAATACTGTGTTTTGGAGCTTTGGGAGTCACCTAATTCAAAATTGGGTAGTTGGAGATGTTTTGGAGAGGAAGTGTTCCAGGCAGAGGAAAAAGTTAGGCCAGGCCTGGAGCTGAGAGAATGTAGTACATTCTGTCAGCTCAGAGTGGTTCAGTCTGACTTACATATTAAGTATAAAGGTGTAGTAAATTTCTTTAGGAAATGTTAATGTGCCAAATGATATGTTTTGGTACTTTGAAAAATGAATATTCAGCACAAAAGATGTTTTAAAATGGTGTTTAAGAGTTCTTAATGAGAGCTTGGTGAACATGTTGATAATTCAGTTTACAGTCCAAATTTTAACAGTAGCTGTTACATTTCTACTCTGTGAGACAAATTTCTCTGCAGTTTTATAGTTGTAAAAGATGATTTGATTCACCCTGTGAATTTCCATACTGTTAATCCCCAGATTAACTAACACGCTGGTTAGTTAGATTAACTAACTAACATGCTGGTTAGTTAGACATAAAACTACTTGAGTGAAGCTTTTTCCCCCAAAAAGGAAGCTCTACAGCCAGCCCAGGGCACCATCTATTATGTAAATCCAGATTTAGGCTTTAGAAGATCAAGTCAAAAAGATCAGGTCAGCTTTAATAGCAACTGTAAATTAGGCTTATGGGAAATAGAGTAGTAAAAGGGAAAAAATATGAGTAGTGAAGTGAAATTGTCCTGGGTTCAAATCCAGTCTTCTTCACGTACTATGGTCTTTGAGCTTCAGCTCAGATGTCATGTAAACTGCCATTTCCTTGGTAGTAAAATGGGGATAATAATTATGCCACCTTAAGGTTATTGTGAGGGTTTTATAGCAAAAAAAAAAAAAAGTTTTAAAAATAGTAATAAAATATCTATAAAATCTATACCTGTAGATTTTATAACTATCTTGTATGTTAGATAACTTGGGGGGAAAAGCTTGGCACACTGTAGAAATGTGCTGTAAAAATTTTTCCCCTTGTTAGGTTCTGTAGCTTCCTGACTGTTGGCCTTGTTTACAACTGTGAATCAGAGATTCATCTTCTATGTCCATGCTCTGCTCTGTTCCTTATTGATTGTATTTTGCACCCTGTTTAAAGCAGATCGATATCTAGGTTTAACCTTGCCACTGTCAGTGTACATTTTTATCAGAACCTTCTGCTTTCCATCAAATGAATGTTGCTTATCCTAACCCAATAATGTACAGTAGCCTTCAGTAATGTTAGAGTTCAAAGGTTTTTTTGTGCCTTTGTCCACCACAAATCCAGCACAATATGTAAATTTGTTTTATGTTTATTTTTTATGTTAATGAAGTTTTGTTTGGTTCTTTGGAGTCTTTTGGATTTGTTTTATTTTGGTTTGGGCTTATTTTATAAGGTCATAGGTTTAATTTTTACTCAGGTAAAGGTCTATAGGTTCTTAGGCATGGAAGAAACCTTGGGAAGCCTATTAATTCATGGTGCAATTTAGAATTACTTAAATAATGTCTGTGGCCCTGAGCTTAATCTAAAGATACAGTAATATGAAGGATGCATATATGAATGAAATAGTAAACTTGGAAATAATCGTAGGCTCTTTTTACAAACAGAAGTAACTGATTATCTCTTTTATTTGTCCTGAAGGTAATTAACTTAAAAGGTCATTGCATTAA EMBV3_01147 GAATTGACCTCAACTATCTGCAACAGTTGCGCAAACAACTGCCTGTGTTCCAGCACCGCA Gene GeneID:504199|NIT1:NM_001038023:224_cdna Constitutive 1 NULL GeneID:504199 3 GENE NIT1 MGC133723 nitrilase 1 EMBV3_32924 GCTTGCACCAAACATTGCAATCATCAGCAGGATTCCAGTTCTGAGATGGATTTAAGCATT Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_17766 TACATAAGAATATGGTACCCATTGTAGATGCGGCTGGCTCTGTGTGGCAGGTGGAAGAGG Gene GeneID:513798|CDNF:XM_002692100:311_cdna UTR3_Alt 1 NULL GeneID:513798 13 GENE CDNF ARMETL1 cerebral dopamine neurotrophic factor EMBV3_09191 AGACATCGAGTGTGAAGAGTGATGGGGCTGCGCATTTTGACTACCAGTTTGGCTACCGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_13744 TCACGTCTGTGTGGGGTTCTGGCGTGTGCTAACTCAGCTTCACCTCTGTGTTCTGTTACA Gene GeneID:529876|WDR37:XM_002692194:91_cdna Constitutive 0 NULL GeneID:529876 13 GENE WDR37 NULL WD repeat domain 37 EMBV3_07624 TGGGAAAAGTGTTCAGGCATGGTTGATGGTGGGTTTATGACCAAGGAGGCCTGCAGTGGA Gene GeneID:532719|GDPD5:NM_001101141:25_cdna Constitutive 3 NULL GeneID:532719 15 GENE GDPD5 NULL glycerophosphodiester phosphodiesterase domain containing 5 EMBV3_29372 GAGACGAGGTTCCTGTGCAACTCCTCCAAGGTGTACCACTGGACTCCAGAGGAGGCCATA Variant GeneID:614890|PTPMT1:NM_001076353:102_cdna 468^659 1 EMBV3_15241 GeneID:614890 15 GENE PTPMT1 MGC134593 protein tyrosine phosphatase, mitochondrial 1 EMBV3_29347 AGACTTCTATGACTCCGAGGAGCAGGTGAGCCCACAACACACAGCAGAAAATGAAGAGGA Gene GeneID:281071|CHGB:NM_181006:709_cdna Constitutive 0 NULL GeneID:281071 13 GENE CHGB NULL chromogranin B (secretogranin 1) EMBV3_20309 CGGCTACTGACACACTGGGAACAGATGGACTACGGGCTCCAATTTACCTCTTCCCGAAAA Gene GeneID:515878|ORMDL2:NM_001014931:1022_cdna Constitutive 1 NULL GeneID:515878 5 GENE ORMDL2 MGC133863 ORM1-like 2 (S. cerevisiae) EMBV3_34722 CCTTTATTTATAGGATCAAAAATTGTTCAGTGGACCAGGGCTCTTATAGGTGGTGAGAAG Gene GeneID:539294|PPCS:NM_001102228:254_cdna Constitutive 1 NULL GeneID:539294 3 GENE PPCS MGC157065 phosphopantothenoylcysteine synthetase EMBV3_10302 TAGGAAGTGGGTCATAGAGGATCTTGCTTTGATTTATGTCATTGAGTGTTCTGCCTATGC Gene BVT0102_259334 + 0 NULL GK000003.2:9129489-9198202 3 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00198561 TCONS_00118457 TCONS_00177902 TCONS_00250575 TCONS_00188757 TCONS_00111842 TCONS_00250928 TCONS_00238555 TCONS_00118462 TCONS_00248761 TCONS_00209390 10 XLOC_120215 XLOC_072622 XLOC_107675 XLOC_153518 XLOC_114798 XLOC_067742 XLOC_153871 XLOC_145222 XLOC_151704 XLOC_127901 Coding TCONS_00118462 XLOC_072622 NonCoding Coding - 21:184318-192955 - TSS88929 8637 3 TCONS_00118462_23 132 0.723283547528077 1 0 7.63189278857133e-10 2.91813203966677e-09 6.12378444726035e-17 0 4.57118768622685e-11 1.2625775610214e-09 4.23689031923997e-11 1.51092193273785e-14 9.15869373969208e-12 6.79748367923577e-22 2.31631878699468e-06 2.29759807190043e-15 2.2730955771648e-09 1.00046786759857e-05 4.58939137629139e-12 6.00146295360327e-05 0.000808618014111565 0.00201554454022668 1.68913200989954e-10 2.44293849297808e-11 3.27722702213607e-11 0.000518813165222231 0.00126358483416606 0.000801413661432468 0 6.01210497418582e-09 0 3.89741268799022e-31 2.08848310342273e-05 1.06181877927816e-05 NM_001103275.1 ACOT11 Bos taurus acyl-CoA thioesterase 11 (ACOT11), mRNA. 0.0 1550 82.15 0.179923584577978 NR_002728.3 KCNQ1OT1 Homo sapiens KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA. 8e-134 484 67.45 0.18652309829802 1 noncoding CCTGTGGTGGATTCATTTTGATATTTGGCAAAACTAATACAATTATGTAAAGTTTAAAAATAAAATAAAATTGGAAGAATAAAAAAAAAAATATATATATATATATATCAAGAGATATTGAAAATACCCCCCATATTTTCAAGTGCAATGTGACATGTTACAAAGAGATATTTGACTTAGCCATTGAAAGCCTCAATAAAGTTAGAAGACTGAAAAAAAATAGGATGATTGCATAGAAAAAACAATTAAATGAGAACTTATTATCAAAATGAGAAATTAATATCAAAGATACTTAAAAAACCCCATCTATATGGAAGTTGTATGCCCACTTTTAAATGATGGATGTATCTAAGAAGCCATAACAAGGAAAATCAGAAAATATCTGTAACAGAATAAAAATGAAAAGAGAATTTACCAAAATTTGTTGTATGCAGCTGAAGCTACTCAATGTGACTAAATATAATGTGGTGTCTTGAATAATGTATGAGAACAATAATGGACTTAGCACAAAATTATGTGAAATTTGAACAAAATCTGTACTTCAGTTAATAATACTGTATCAAATATTAATTTCCTTCTTCTTCTTTTTTTTTTTTTTTTTAGCAGCATAGTATTTCTTTCTGTTCTTAGAATTGGATTAGAAGTTTCAAGCATCATTCATTTTTTTTTTAAAATCATGAAGATAGTAAGCTTTCTATCTCAGTAGATGATGGCAGAGTAGAAAGACATGAGCTCATCTCCTCCTGTAAGAATACCAGAATCACAGCTGGCTTTTGAACAACTATCAATACGAGGATGTTTGAACCCACCAAAAATGATACTCCATGTCCAAACACAAAGAAGAAGCCAAAAAGAGATGTAGGAGGGGCACAACAATGACAAAATCTAACCCCATAGCTGCTGGGTGGCCAACCCACAAACTGGAGAATAATAATACCAAAGAATTTCTCCAACTGTTATGAAGGATCTGAACCCCACATCAGGCTTACCATCTAAGGATCCAGAAAAAATGACTGAGAATCCCCAGGGAATCTGACTTTTAAGGACAGTGGCATTTGATTATATGAATTCCACAGGATTGGAAAAACAGAGATTCCACTCTTGGAGGGAACAAACAAAATATTTCATGTACCAAGACCCAGGGGAAAGGAGGAGTGACCCCACCGAAGGCTGAACCAGACCCACCTGCTAGTGTGGGAGTGTCTCCTGTGGAGGCGTGTGTTGGCAGTGGCTCACTGGGAAGGGGAACATGGGCAACAGCAGTCCTGGAAGGTGACCTTTGGTGTAAGTCCTCTTGGATGTTGCCATGGACCCTACCATAGAGTCAGTAGATTCCAGGGCTGGATCACCTCAAGCCAAACAACTAACAGGGAGGGAGCACAAACATCCCACTAGCAGATAATTGGATTAAAGCCTTGCTCAGCATAGTCCTGTATACCAGAGCATGACCCAGTTTTTCATACTGCCAGTCCCTCCAACAAGAAACTTACACAAACCTCTTAAACTATCCCACCAGTGGGCAGACAGAAAAAGCAAGGAAAACCAGAATCCCACAGTGGAATAAAAACTAATTTACAGAAATTTAGTCAAAATGAAAAAGCGGAGAGTTAAGTCCTGGATTAAGGCACAAGATAAAACACCAGAAAAATGAGTAAATGAAGTGGACATAGGCAACTTTCTAGAAAAAGAATTCAGAATAATGATAGCAAATACGAGCCAGAGTCTCAGAAACTGAATGGAGAAGGATCATGAAATATTTACTGAAAACCTAGAAGAACCACAAGAAAAACAGAGATGAAAAATATACTAGAAGGAATCAATGGCAGAATAACTGAAGTCGAAGAACAGAGAAGTGACTGGTGAACAGAATGGTGGAAAACATTGCCACAGAAAAGAATACAGAAAAGAGAATGAAAAAAATGAAAATGGCCTGAGAAAATATTCGAAGAAATAATAGCTGAAAATTTCCCTAACATGGGACAGGAAATAGTTAACCAAGTCTAATAAGTGCAGAGAGCCCCAGAAAGGATAAACCCAAAGAGGTACACACTAAGGTACATAGTAATCAAAAACAAAAATTAAAAATGAAGATAAAATATTAAAAGCAAGAAGAGAAAATTGACAAATAGCATACAAGGGAACTCCCATAATGTTATAACCTGATTTATCAAAAGAAACTCAACAAGCTGGAAGGGAGTGGCATGATATACTTAAAACGATGAAAGGGAAGAACCTACAACCAATAATACTCTACCCAGTAAGATTCTTGTTCAGATTGGGGAAATCAAAAGCTTTCAAGACAAGCAAAAGTTAAGAGAATTCATCACCACCAACCAGCTTCACAACAAATGGTAAAGGAACCTCTCTAGGAAGGAAATAGAAGGAAAAGACCTACACAAAATAAACCCAAAATAATTGAAAATGAGAATAGACTCATACATATCCATGATTTCTTTTAATGTAAATGGGATAAATGCCCAACCACAAGACATAGATCGGCTGTATAAATGAAAATAGGTTCGTGTATGCACTGCCACTCACCACATCACTCAACTTAGCTCCCAAAATTGTGTGTGACAATTTTATATTGTTAGGTTAATAACGTTCCATTATGGCTTGCAATTGTAATGATCTTTTATTTTTCTCTGGCTATTAGTTGTGATAAGAAGAAAGCCTGTTAAGTGAACAATGCAAAGAAATAGAGGAAAACAATAAAATGGGAAAGACTTGAGATCTCTTCAATAAATTTAGAGATACCAAGGGACTATTTCATGCAAAGATGGGCACAATAAAGGACAGAAACGGTATGGACCTACAAAAGCAGAGATATTAAGAAGAGGTGGCAAGAATACACAGAAGAATTACACACACACAAAAATCGTAATGACCCAGATATCCACGATGGTGTGATCACTCACCTAGAACCAGATATCCTGGACTGTGAGGTCAAATGGGCTTTAGGAAGCATCACTGTGAACAAAGCTAGTGGAAGTGATGGAATTCCAGCTGAGCTGTTTCAAATCCTAAAAGATGATGCTGTGAAAGTGTTGCACTCAACATGCCAGCCAATTTGGAAAACTCAGCAGTGGCCACAGGACTGGAAAAGGTCAGTTTTTATTCCAATCCCAAAGAAAGGCAATGCCAAAGAATGTTCAAACTATCACACAATTACACTCATTTCACACGCTATCAAAGTAATGCTCAAAATTCTCCAAGATAGATTTCAACAGTATGTGAACCAAAAACTTCCAGATGTTCAAGCTGGATTTAGAAAAGGCAGAGGAACCAGAGATCAAATTGTCAAAATTTGCTGGATCATCAAAAAAGCGAGAGTTCCAGAAAAAACATCTATTTCTGCTTTATTGACTATGCCAAAGTCTTTGACTTTGTGGGTCGCAGCAAACTGTGGAAAATTCCGAAAGAGATGGGAATACCCCACCAATTTACCTGTTTCTTGAGAAACCTGTATGCAGGTCAAAAAGCAACAGTTAGAACTGGACATGGAACAATGAATTGGCTATAAATTGGGAAATGAGTGCATCAAAGCTGTATATTGTCACCCTGCTTATTTAATTTACATGCAGGGTACAACATGCAAAAAGCCAAGATGGATGAAGCACAAGCTGGAATCAAGATTTCTGGGAGAAATATCAATAACATCAGCTATGCAGATGACACCACCCTTATGGCAGAAAGCATAGAGGAAATAAAGAGCCTCTTGATGAAGGTGAAAGAGGAGAGCAAAAAAGCTGGCTTAAAACTCAACATTCAACAATTGAAGATCATGGCATCCGGTCCCATCACTTCATGGGAAATAGATGGGGAAACAATGGAAACAGTGAGACTATATTTTCTTGAGCTCCAAAGTCACTGCAGATGATGACTGCAGCCATGAAATAAAACCATGCTTGCTCCTTTGATGAATAGCTATTACCAACCTAGACAGCATATTGAAAACAGAGGTGTTACTGACAAATATCCATCTAGTCAAAGCTATGGTTTTTCCAGTAGTCAGGTTTAGAGGGAAGAGTTGGACCATAAAGAAGGCTGAGCACCGACCAATTGACACTTTTTAACTGTGGTGTTGGAGAAGACTCTTAAAAGTCCCTTGAACTGCAAGGAGATCAAATCAGCCAATCCCAAAAGAAATAAATCCTGAATATTCTTTGGAGGGACTGATCCTGAAGCTGAATCTCCAGTATTTTTGCAACGTGATGCAAAGTGCCAACTCATTGGAAAAGATCGTGTTGCTGGGAATGATTGAAAGCAGGAGGAGAAGGGGACGACAGAGATGGAAATGATTGGATGCATCACCAACATAATTGACATGAATCTGAGCAAGCTCCAGGAGATGGTGAAATACAGGAAAGCCTATCATGCTGCAGTCCATGGGATTGCAAAGAGTCAGACATGACTGAGTGATTGAACAACAATAATTGATTTTGGAAACTGATAAACATCTTTACTATTGTGATTATGTAACTATTATTTACTTAATATTGTTGTATCATAATTAATCAATGCAAAAAATAGAATTATTTATCACTAAAACTATAATTTTATCTAACAAATGCCATCACTTTTGAAAATCCAGATACATAACAGAATTATCTTGGAATTAAAAACAAATACTACTGCTCAAGTATTTCTTTCTTTCTCCAAAACACCTATGTTTCTAATGAGCAGCCGTGTTGAAAGCAACTGGACTATATGATGATCTTTTACATTTATTTGGGTTTTTTTCACTTTTTCTATTTCATATTCAATGCTCCCATTTCATTTAGTTTGTTTTCTAACCACCCCCCCCCCCTTTTTTGGATGTCATTTCTCAAGTCTTTATCAAATATAGAAAAGCTTTTCTATAATACTATTTTCAACAACACATTAAAAAGCTCACACACAGATAGTGAAACTCTGCTGCAAGTGCTGAAGAGGTGGGAAAAAGTCATTCAAATTCTGCGATGTTTATGGCTCATTCTTCCTTAAGAAACTGAGTTACTTCCAGTTCTTAGCCCCCAGCCCCGCACCCGCGCCCGTGGAAGGCAGAAAGCCAACGCTTGAGTAACGTGGCGATGCATTTTAAGAAGAATCAGCTCCTTGGAAGTGGGGAGAAAATATATTACTGGACTTTGCAGAGGCCAACACGCCCCAGCAGAGGTACTCTAGCCTCTGTGTAAAGAGCATTGTTCTTCGTAGATGGAAAGGAAGATAAGGAAGCCCACAGACTTAATGTGGTGGACTTGGGATGCACCACCAGAGCCCTCTCTGAGGCCAATGCTGCTGTGAGTGCTGGTTGCTGAAGTCTGTCCGTCCCAGGAATTCCACTCCAGGAATTGTCATTGGCTACAGGGAGCTGCTTTTCCCAGAGTCCAGCTCCTCGCATGTGGGCACAGGGGGAGCAGCTGCACAGGACCATCAGCTCCAGAGTCACTGTGGGGTCAGCTGAGGCCTTCGTGGTGAAAGCAGAGCAGCTCAACTTCTGCCTATTCCTGTTGCCTTCTCACCCCCTCGAGGATGACTCCAAGAGTACCCCCAATAAGCCTCCTGTGAGAAATAATCTCATAGACTATTTCCTGGGGAGCCTGACCTATGACACTTGGGCTAAAAATATTAGAAAGGATGGCACGCAGTATAGAGTGAGGGTCTTAAGTCCCCCTATCTGTTTTTTTCCCCAAGAATCTGATCCTCCTTGGTTAAAATAGCTGAAGGGCTTTGGGATAGCAATTGCAATCCAGGAAACCCAGGAAAAGATATTAAAATATATGAAAATGATTATAATAAATGAGAAATGCATTTTAGAAAATTCTTTTTTAAAAAGCAGAAGCACCAAAATATCACTTTAAAAATCAGACTTGTGGAAAATAAGAAATTTTACCCGGGAGACTATTATTATTAGAAACTCTGAGACCAAAGAGCAGTGTTAGGACCTTGATACTTTTGTTTTTTTTTTTTTTTTTTGGATGTGAATTGCTTTGTATAATAAATGCTTGGTGATTGAGACAGCCAAAAAAAAAAAAAAAAACAAAGCTCACACATCATTGTCAAGTCGGGTTTATTCCAACTATGTAAGAATTCTTCAATATACACAAATCAAACAGTGTGATATACCATATTAACAAATTGGAAGATAAAAACTGTATGATCATTTCAATAGATGCAGAAAAAGCCTTCAACAATATTCAGCACTCATTTATGACAAAAATGCTTCAATAAATGGGCATGGAAGGAACCTACATCAACATAGTAAAGGCCATATATGATAAACCCACATCAAACATTATCAATAGTGAAAGACTAAAAACATTCCCTCTAAGATCAGGAACAAGATAAGTTTGTCCACTCTCATGACTATTATTCAACATAGTTTTGGAAGTCCTAGCCACAGCAATTAGAGAAGAAAAAGAAATAAAAGGAATCCGATAGGAAAAGAAGAGTTAAAACTCTCACTAGATGACGTGATACTATACATAGAAAATCCAAAAGAAACTATCAGAAAATTACTAAAGCTAATCAAGGAATTCAGCAAAGTCATGACATAGAAGGTCATTTCACAGAAATCACTTGCATTCCTATATAATAGCAAGGAAAAATCAGAGAAATTAAGGAATCAATCCCATTCACCATTGCAATGAAAAGAATAAAATATTTAGTAATAAACCTACCTAAGGAGACAAAAGAACTGTATAAGAAAAATTATGAAAGAATTTCATTTCTTTCTGATGAAAGAAGTCAAAGATGGCATAAACAGATAGAGATATTCCATGTCCCTGGGAAGGAAGAATCAATATTGTGAAAGTGACAAACTACCAAATGCTATCTACATATTGAATACAATCCTTATCAAATTGTCAAAGGCATTTTTCACAGAACTAGAACAAAAAATTTCACAATTAATATGGAAAAACAAAAACCCTGAATAGTCAAAGCAGGCTTGAGAAAGAAGAATGGAGCTGGAGGAATCAACCTTCCTGACTTCAGATTATACTACAAAGATACAGTCATCAGGACAGTATGGCACTGGCACAAATACAGTAATGTAGGCAAATGTAACAAGATAGAAAGCCAAGAAATGAATTCATGCATCTATATGTACATTATTTTTAACAAAGGAGGCAAGAATATACAACGAGGCAAAGATAGACTCTTCAATAAATGGTCCTAGGAAAACTGGACAGCTGCATGTAAAAGAATGAAATTAGAACACCTCCTAACACCATACAGAAATATAAACTCAAAATGGATTAATGACCTAAGTGTACAACCAGGAACTATAAAACTCTTAGAGGAAAACATAGGCAGAACACTTAATGACATAAATCAAAGCAACATCTTCTATGACCCACCTCCTAGAGTAATGGAAATAAAATAAAGAATAAACAAGTGTGATCTAATTAAACAAAAGCTTTTGAACAGCAAAGAAAAACTTGAAAAGGCGAAAAGCCAACCTTCAGAATGGGAGAAAATAATAGCCAAGGAAAAAACTGATAAGTAATTGATTTCCAAAATGTACAAGCAGCTCAATACCAGAAAAACAAGCAACCCAATCAAACAGTGGGAAACAGACCTAAACAGACATTTCTTCAAAGAAGACATACAGATGGCTAACACACACCTGGAAAGATGCTCAACATCACTCATTATTCAGTTCAGTTCAGTTCAGTTCAGTTGCTATGTCGTGTCCAGCTCTTTGTGACCCTATGAGTGACAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTCCACCCAAACCCATGTCCATTGAGCTGGTGGTGTCATCCAACCATCTCATCCTCTGTCATCCCCTTCTCCTCCTGCCCTCAATCTTTCCCAGCATTAGGGTCTTTTCAAATGAGTCAGCTCTTCGCGTCAGGTGGCTAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAATGAACATCCAAAAATTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGAGACTCTCAAGAGTCTTCTCCAACACCACAGTTTAAAAGCATCAATTCTTTGGTACTCAGCTTTCTTTATAGCCCAATTCTCACGTCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGACGGACCACTGTTGACAAAGCAATGTCTCTGCTTTTTAATATGCTGTCTAGGTTGGTCATAATTTTCCTTGCAAGGAGTAAGCACCTTTTAATTTCATGGCTGCAATCACCATCTGCTGTGATTTTGCAGCCCAGAAAAATAAAGTCAGCCACTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACCAGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTTACTCTCCTCTTTCACTTTCATCAAGAGGCTCTTTAGTTCTTCTTTTGGAGAAGGTAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCTCACGGGCAGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCGAAGAGTTGGACATGACTGAGCGACTTGACTTTCACTTTTCACTTTCATGCATTATAGAAGGAAATGACACCCCACTCTAGTACTCTTGCCTGGAGAATCCCAGGGACAGGGGTATACTTTCTGCCATAAGGGTGGTGTAATTTGCATATCTGAGA TCONS_00120340 r 5' 119387 TCONS_00120340 r 5' 119387 EMBV3_20524 AGCCTGTTTCCAGACCCCTTGTTCTGAAGCTGGGTGCCTTTGTTCAAGAGCAGCACATGT Gene GeneID:785942|SEMA4D:NM_001098160:8_cdna Constitutive 0 NULL GeneID:785942 8 GENE SEMA4D MGC138992 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D EMBV3_20311 TGGTGCACGGGATTCGCATTGTGGTGGCTCCTCTTTTTGCAGAGCACAGGCTCAAGAATT Gene BVT0102_230824 + 0 NULL GK000029.2:44505001-44544723 29 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_23560 GAAAGCAGCAAGTGACTCTGAGATGTTCCCCCGAATCTGGACACCGCTATGTATCCTGGT Gene GeneID:100300680|LOC100300680:XM_002687097:363_cdna Constitutive 0 NULL GeneID:100300680 4 GENE LOC100300680 NULL hypothetical protein LOC100300680 EMBV3_11211 GCCCACCCCCCACTCACCTACACTCTGAAACCAAACTACATCACTGACACCTTCAGATCA Gene GeneID:517961|LOC517961:XM_002686119:148_cdna Constitutive 0 NULL GeneID:517961 3 GENE LOC517961 NULL similar to Protein FAM46C EMBV3_16930 GGTCAATGCCATCTATGGTCTGATTGTTGCCCTCCTGATTGGAGGTTTTGACATCCTGTG Gene GeneID:505362|LOC505362:XM_002693200:383_cdna Constitutive 0 NULL GeneID:505362 15 GENE LOC505362 NULL similar to Olfactory receptor 52N4 (Olfactory receptor OR11-64) EMBV3_17033 CATACCAGCCGACAGCCTACCTGGTGTGATCCCCTTCAGCACCCGTTTTCTTGCGGGCTG Variant GeneID:617807|PSMF1:NM_001076478:1330_cdna 678^995 3 EMBV3_04416 GeneID:617807 13 GENE PSMF1 NULL proteasome (prosome, macropain) inhibitor subunit 1 (PI31) EMBV3_22807 GGCTGGGCCTTGCGGGCTGCCCGGTTGGAGACTCACGGGACATAACACCACTGCTGGATG Variant GeneID:100335747|LOC100335747:XM_002689668:14_cdna 319^439 1 EMBV3_39875 GeneID:100335747 8 GENE LOC100335747 NULL hypothetical protein LOC100335747 EMBV3_10369 ACCAGGAGACACTCTGCACCTTCATCATTCCACATCCCACAGTGCCATCTACGTCACTCC Gene BVV0102_382804 + 1 EMBV3_41349 GK000028.2:30766928-30807518 28 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_41132 ACGGTCTCTAGACTATAGTCATGCAAACATTTGGGGTGGATTTCACTTCCCATTTTACTC Gene BVT0102_095965 + 0 NULL GK000005.2:99360897-99407005 5 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33153 TGGTGATAACTGTGGTCCTGAGTACCTCGGGAGTTTTCTCTAGCTCTTGTCCCCCTAACT Variant GeneID:532865|CLEC7A:NM_001031852:40_cdna 203^340 1 EMBV3_22446 GeneID:532865 5 GENE CLEC7A MGC127600 C-type lectin domain family 7, member A EMBV3_00940 AAACTGGATGATGATTCAGTCATAGAAGGAAAATGCACATCAAAATATTCACCCAGAAAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_07553 CGGAGTCTTAGCCACTGGACCACCAGGGAAGTCCTTAGAATTTTCTTATGCCTTTCTTTG Gene BVT0102_287456 + 0 NULL GK000026.2:38945875-39218800 26 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_21108 GAGATGCAGAAAGCCTTCGGGGAGGACCAGCTCTACAGGGTGTACTCGTTCCTGGACTAC Variant GeneID:515424|CPNE7:XM_002694766:542_cdna 840^926 1 EMBV3_24200 GeneID:515424 18 GENE CPNE7 NULL copine VII EMBV3_40508 CAACTGCCTGGAGAACCTCGGAGACCAGCTATACGAGGAATGTCAATTGACCAGGCTCTG Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42730 AAGGGAACCTTGTTCTGGGCGGGCGGAGAGCTTGAGTCCGCTAGGAATGGCAGCCCCAAC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42285 ACGGTGTTCATCAAGAGTGGACTTTAAACCCTTGGTCTTCAAATGTACATAGGTATGTGG Gene GeneID:512508|MPHOSPH6:NM_001075564:35_cdna Constitutive 1 NULL GeneID:512508 18 GENE MPHOSPH6 MGC134393 M-phase phosphoprotein 6 EMBV3_08643 CGCCGACCTGATCTCCTTCACCCTCATCGTTGGCATCTTCGTACTCCAGAACTATCACTT Gene GeneID:532719|GDPD5:NM_001101141:25_cdna UTR3_Alt 3 NULL GeneID:532719 15 GENE GDPD5 NULL glycerophosphodiester phosphodiesterase domain containing 5 EMBV3_20385 CATGTTCGCCGTGGGCATTGGGGCCTTGCTGTTCGGGTACTGGAGCATGATGAAGTGGAA Gene GeneID:338084|NDUFA13:NM_176672:21_cdna Constitutive 0 NULL GeneID:338084 7 GENE NDUFA13 GRIM19 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 EMBV3_23288 GTAAACGCATCCCCATCCCTCACCTCCAGCACTGCCAACGACCGAATCCTTAAGTACAAT Gene GeneID:539530|TTLL1:NM_001076171:195_cdna Constitutive 0 NULL GeneID:539530 5 GENE TTLL1 MGC142767 tubulin tyrosine ligase-like family, member 1 EMBV3_31353 ATTTCTAAGAAGACAGTCCCACTTATTATGTCCTTTTGGGTCTTTGTGAGGTTGAGGGGC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_38870 CAATACTTGGCCGAAATCTATCAGGTCAGCCCAACTTCCCTTGTCGTGTCAATGCTGTGC Gene GeneID:614147|TM9SF3:XM_002698409:341_cdna Constitutive 0 NULL GeneID:614147 26 GENE TM9SF3 NULL transmembrane 9 superfamily member 3 EMBV3_03752 AGATATTGAGCGTGGTGATATAGTGATTGGAAAGCTTGCAGTGTCTCTATATAGCTCATC Variant GeneID:512635|TTC14:NM_001101960:19_cdna 504^713 3 EMBV3_17715 GeneID:512635 1 GENE TTC14 MGC143168 tetratricopeptide repeat domain 14 EMBV3_38799 AGACTGTGGCTTCTGTCTTGCTGGTTCTTCTTGTCTGATTGCTCTGGGGAAGAGGAGCAT Gene BVT0102_104137 + 1 EMBV3_13431 GK000010.2:396436-555338 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00018657 1 XLOC_009340 NonCoding TCONS_00018657 XLOC_009340 NonCoding NonCoding - 10:415418-415778 - TSS12547 360 0.577777777777778 1 0 0 0 0 0 0 0 0 0 0 0.000560027953549042 0 0 0 0 0 0.000146731122164333 0 0 0 0 0 2.06129698998964e-05 0 0 0 0 0 0 0 0 XM_005221228.1 MFSD11 PREDICTED: Bos taurus major facilitator superfamily domain containing 11 (MFSD11), transcript variant X1, mRNA. 4e-13 78.8 72.41 0.383333333333333 NM_138700.3 TRIM40 Homo sapiens tripartite motif containing 40 (TRIM40), mRNA. 3e-08 62.6 76.92 0.247222222222222 0 noncoding GTGGATAGAAGACTTCAGTTCCTTCCTCACTGTTGATGTTAAGTAACCTCTGCTCCTTCCTGATGCTCCTCTTCCCCAGAGCAATCAGACAAGAAGAGCCAGCAAGACAGAAGCCACAGTCTTTTGTACCATGATCTCAGAAGTGACATCCATCATGTTAGCTGTATCCTGTCCTTGAGAAGCAAGTCCCAAGATCCCGCTGACACTCCAGGGGAGGGGATTACACAAGGGTGCCACTGCTGGGAGCCTGGGATCAGTTTTAGAAGGCTACCTGTCGCACTTTCTGACTTTTATAAGCAGTGCTGTGGTGAATGTTCTTATATATGCATCTTTCAAAACCCCTTCTGATGTGGGCTCAGT TCONS_00012283 . 3' 163001 TCONS_00012283 . 3' 163360 EMBV3_07818 TCAACATCGGAAAGCCTGAGACCCAACAGTGGAAGAGCGGACTCCAGGCCATGCAAGATA Gene GeneID:516667|LOC516667:XM_002700236:227_cdna Constitutive 0 NULL GeneID:516667 X GENE LOC516667 NULL similar to ferritin heavy chain EMBV3_40820 GTCTTTGGTGCTTCTGTCCCTAATAGCACCAGTCAACAACACCACAACCACATGGAAACA Gene GeneID:540325|FAM84B:NM_001105632:50_cdna UTR3_Alt 1 NULL GeneID:540325 14 GENE FAM84B MGC165820 family with sequence similarity 84, member B EMBV3_06233 ATAACTGTTGAAGGCCCGCATGTCAGAGCCCCTGCTCATCAACAAGAGACACCACTGCAA Gene BVT0102_197361 + 1 EMBV3_06857 GK000004.2:94359402-94406699 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00182419 TCONS_00184889 2 XLOC_110852 XLOC_111450 NonCoding TCONS_00184889 XLOC_111450 NonCoding NonCoding - 4:94394368-94398737 - TSS137569 2810 1 TCONS_00184889_3 106 0.213879003558719 2 0.357142857142857 5.58144487347448e-05 1.07338157864586e-05 0.000174540004533992 0.000549668074708877 8.95852623850891e-05 0.000358239840562995 2.8079101400715e-05 5.26216368191418e-05 3.93319348902289e-05 4.98847445945704e-05 5.22375174887194e-05 2.54637158409495e-05 6.129967591302e-06 2.84742107569185e-05 2.1907808426901e-06 0.000371473601820092 0.00172925111274655 1.34012787633613e-05 0.000145672412608786 0.00013051689101565 0.000117031488563536 0.000136077403242041 0.000126632404899155 0.000107671393922142 2.46563838382348e-05 0.000245517695686618 0.000414302611259201 6.84020358141443e-06 1.29642975049311e-05 7.81380390055872e-05 XM_005205681.1 NRF1 PREDICTED: Bos taurus nuclear respiratory factor 1 (NRF1), 0.0 3169 100.00 0.62491103202847 0 noncoding 1 1 1 1 -0.125817789217565 0.296007396761181 0.0100970360871756 0.847129686564398 ATTTTCTGACTTAAGACATTCACAGACTCAGGAGGATCTTCGTAGAGGCAATGAAGGGCAGTGCGGAAGCTGTTAGGGATCCCAGCTTGACTGTTCCCTGGCTGACGCAGGTTCGGTGGAAATGATGGCAACTGCCATGCGGTGGATCCATATCCCAGCCCCTGCAAGGGCTGCTCTACCTGTGCGACGGCCAGCCCCGCAGCTGGGTTTGGCTACCCGGCCCCAAGGCTGATTAGTCCGGAGACACACGTGACTTCAGCGGGCCAATCAGCTGTGTCCTCCCCGATACCACCCCTCCCTGTTGGGGAGTGCGAACTTGGGTTCCGAGGACACCGGTCCGTCTTTGTAAGGCACCTCCGGATTTCTGCTGTTCACATCCAGAGCGGTTTTGATCACCAGTGGACCCCAGGAGCTTTCAGTGTCTCATTCAGTCTGTGCAGGAGACCTGGGTTCAATCACTGATCCGGGAAGATCCCGTGTGCCGCGGAGCAACTAGGCCAGTGCGCCACAACTATCGAGCCTGTTTTCTCGAGCCTGGGAGCCGCAAGACCGTGGGCCACAACTGTTGAAGGCCCGCATGTCAGAGCCCCTGCTCATCAACAAGAGACACCACTGCAATGAAAAGCCTGTACACTGCAACTGGAGTTTGCCAACCGTACACTATCCCCTCTTGCTGCAACTAGAGGAAAGCCTGCAAGGCAATGAAGACCCAGCACAGCCATAAGTTCTATATATAAAACATGGGAATCCAGATGTGCAGCTCATTTTGTGTCACCTGTCCCCTGAGAGCTTGGCACAAAGAGCTGAGCTTCTGGAGGGAGGCTTATTAGTCTGACCCCAGCTCTCCTTTACTAGTTCTCGGAATTGGCCAAGTCTTAGCTCCCACACCTATAAAATGGAATCTAACCTCCATCTGAGGTTGTGGAAAGGATTAGAAATAAAGGTGTAAAGTATTTTGCATAGTGTCTTGTGCAGAGCAGCCATTTAATAACTGACAATTATTAGTTTCTTAAAGGGTAAATAAATTCAGAAGAAATTTGAGTTGAGACCCAGTTAAGTTACACCAACAATTTTATTGACAAGCGCATTAAGTTTGGGGAATATTTCTAGCTCCCCTCCCCAAGTATTAAATAAGCTACCTCTTAACTTCTTTGTGGTTCAGTTTGCTCATCTGTAAAGTAGGGAGTAACAGAGCTTTTGCAAAGACTAATAAATAACAACGTATAGTAACTCTCTTAGAACAAGGCACACTGTAAGAGCTGTACAAGTGCTCACTATTTTAACTGCTACCATATCAACACTCTGAATTGCAGATAGGCCATGGTTCTCATAAACTAGAGCTACGAAGGCTTTTGTACAGGGCTAGGGCGCAGGCCTGTCCTTACCGTACAAGGTGGCTCTGGAAGACTTGGGTTTTGGGGGTCCTGGCCCTGCTCTGCAGATGAGTATTATCCTGGTACCTTTGCCCTCCCATCTCCAACTCTTTGCAGAAATACACTCCAGTACTCAACAAACATCCGCTAACAGCCCACTGGTTTCTCAGGAGGGAGAAACTCAAATTCAGAGTGGGTTGGGGACTCATTCAGGGACCCAGCAGCAGCGGGAGCAGAATTCTCCAGCTATTTCAGAGTCCAGTCCTAACGCCGTTATCTCCCCGCTCTGTGCGCCTCCTTCCTCTGGGCTGTCTCCACTGTCCCAGGTGGATCTTCTCCAAGAGCTGCCAATCTGGAGCAAACAGCAGAGGCCAGATGGGATGCACTGATGGGTGTCCTTGATGCTAGCATCTGAGCACGAGCTGTGCGGAGGCCACAGGCTGGCCTGGTCTGAGGACCTGGGCGGCCCACAGCCCACTGAGATGGAGGTGCGAGAGGAAATGTAGGCTTGTCTTCCTCAGCCCACGAAGCTTCTGCTCCAGATAAGCTTCGACGTTCCCCCCGATACCAAAAGGGCCTACCACAGGCCCAGAGCTACTCCATCCACAGCTGATGCTTTGCAGGGGGCTGGGAGGGTGCTGATGAGGAGAGAAGAGGAACAGCAGCGGATAGGAAGGAAGGCGAATGCAGAAGCAGGCCCTCTTCGACGTGAGAAGTGGCTGGAAATGAGCCTTGTCTGGGTCTGAGTGAGGCCCAGGGCACACTGGCAGCTGGGGCTCTTCTTACAGGGTGAGTAGTCCCTTCTCTTCCCTGCCCTTCTGGTTCTCCTCGGCTCACTCATCTCAGTTCAGATGGCTCCAGTGGTCACCAGCATCGCCAATGGATCTTCTCAGATGTAGGACTTAAAGGCAAGAATTCCGAGCCCAAGGTAGTTGGTTTCGGTGAGCACCAGATCCTTGTCTGGAGCCTAGATGATAAACTACTTATTGCAGAGGACCCTTCAGCAGATAAAATGAGATAACAGAACCCCTTCTGCCACATCACTCTGTCCAGATGGCACCTTATCACGCTGGGCTGCCGCGGTCTGTTCACACAAAAACATCTCCTCGTCTCATCCTGTTTCTTGGGCAACTGCTATGCTTCATTCACCTGGCACATGGTAGGCATTCACTAAAGCAAAACTGACGCCTGGGGCCAGAGCTGGTCTACAGGTGGGTTTTCTTTTGTTGGCAGAGTATGTAAAAGACTTTTGATTTATTGTTGAAATCAGGAGATTCATGCACAAATCTGGACTCCTCAGTTTCTCTGGAAAATTTAGAAGTCAGGACTGTAGGGCCCATGTTCCTCCTGCTTGGAGACAGTCCACTAGCACTCAGGAGAGGCCACTCTCTTTAGAGATGCTCTCCACTCTGCCCATCTCCATCACTCCTTCCCCTC TCONS_00182415 TCONS_00182416 TCONS_00182417 r 3' 2693 TCONS_00182415 TCONS_00182416 TCONS_00182417 r 3' 5062 EMBV3_16627 AGTGACTAGGTGCGCCGTCACTGACTTCTCTCACTATTTCAGACTCAAAGCAAGGGCTGG Gene GeneID:614713|SLC25A26:NM_001103297:62_cdna UTR3_Alt 6 NULL GeneID:614713 22 GENE SLC25A26 MGC166132 solute carrier family 25, member 26 EMBV3_12036 TCTTACTCCTGGGAGGGGATCATTAATCTGTGGTGCTGTAGTGCCATTTGCAATCATGAC Gene GeneID:783379|LOC783379:XM_002687646:819_cdna UTR3_Alt 2 NULL GeneID:783379 5 GENE LOC783379 NULL similar to Uncharacterized protein KIAA1033 EMBV3_06145 TCCGTCTCCACCCTGCCTCCCCTGGCCCCCAGCCTGAGCAAGTGAGGATGCAGCAAGGGA Variant GeneID:614849|C15H11orf59:NM_001034769:28_cdna 598^680 2 EMBV3_41610 GeneID:614849 15 GENE C15H11orf59 C11orf59 MGC127399 rhoA activator C11orf59 homolog EMBV3_23971 CCTTCAGCCACTTGTCCTCCTTCTCCTTGAGTGATGAACAGGAGAATTCTCACACCTTGT Gene GeneID:790110|C23H6ORF142:NM_001083802:179_cdna Constitutive 0 NULL GeneID:790110 23 GENE C23H6ORF142 NULL chromosome 6 open reading frame 142 ortholog EMBV3_18517 CGTGGTCAGGAACTCCCGGTGCTGTAGAATGGAACCGAAATTTTGTGCAGACCACCCTTT Gene GeneID:513825|SERPINB8:NM_001035287:91_cdna Constitutive 0 NULL GeneID:513825 24 GENE SERPINB8 NULL serpin peptidase inhibitor, clade B (ovalbumin), member 8 EMBV3_04845 CTCTTCCTGAATGGTATCAGTGGCCTGCACATCAACAGCATCACCCACATCAACAACAGC Gene GeneID:613815|TMEM37:NM_001034744:26_cdna Constitutive 1 NULL GeneID:613815 2 GENE TMEM37 MGC126930 transmembrane protein 37 EMBV3_32104 ATGGCCAGGATCTGTTACAGCCCTGACTTTCTCACCTATGTGGATTTCTTGGCTTATGAT Variant GeneID:615514|GSTM1:NM_001083772:194_cdna 637^732 1 EMBV3_30449 GeneID:615514 3 GENE GSTM1 MGC142892 glutathione S-transferase mu 1 EMBV3_18245 GATTCAGAACACTAACATTGACAATGGGCACGCCTGGCACATGAGTGTCTGTCACAGAGC Variant GeneID:614626|MED29:NM_001080316:733_cdna 283^367 2 EMBV3_24043 GeneID:614626 18 GENE MED29 MGC148741 mediator complex subunit 29 EMBV3_35378 CAAGGCTAAAGGGCAGCCCAGGGAGCACAGACAATGCTGTAAGACAAACCATTAATTCTC Gene BVT0102_030937 + 0 NULL GK000007.2:59267640-59288867 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_33257 CCGGAAGGCTCAGACGTCTCGCCGCCCAACACAGACGTGTATGATACAAAAGACTATTAA Gene GeneID:514865|CHKA:XM_002699402:427_cdna Constitutive 2 NULL GeneID:514865 29 GENE CHKA NULL choline kinase alpha EMBV3_00633 ACAACTAAGGGGCACCAGGCCCTCTGAGGTTTTACTTTAAGGTCCAGCGAATTCCGCCTT Gene GeneID:514462|CDO1:NM_001034465:3_cdna Constitutive 0 NULL GeneID:514462 10 GENE CDO1 MGC127872 cysteine dioxygenase, type I EMBV3_32788 GCGGGCCTCAGTTAGGACGTTCTGCGCGCAAATCTCATCAATTTTATTGCCTGCTCGATT Gene GeneID:532376|MAFB:XM_002692462:509_cdna Constitutive 1 NULL GeneID:532376 13 GENE MAFB NULL v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) EMBV3_10611 CCAGGATCGGAAATACCCTAATGGAGTTGACCTAATGGAGTATTTCTGTACCACATCATG Gene BVT0102_392925 + 0 NULL GK000013.2:78304516-78319045 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_09504 GGACTGAGACAAGGTCCTACTGCCTATGGTTGGAAGCAATCTGCAATGTGAGATGCACCA Gene BVT0102_027593 - 1 EMBV3_25474 GK000004.2:24216308-24492020 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00181015 TCONS_00181012 TCONS_00181011 TCONS_00181013 TCONS_00181017 1 XLOC_110524 NonCoding TCONS_00181017 XLOC_110524 NonCoding NonCoding - 4:24411191-24431631 - TSS135610 272 3 0.986838886442585 0.00193372461202469 0.000272247366178333 0.00115088434660724 0.00013765982228108 0.00026901691883013 0.000346010361980271 0.000397447219884597 0.00095839140296657 0.000348094421650945 1.95047110807058e-124 0 0 0 1.42566694647323e-05 0 0 0 0 0.0012256612133038 0.00117569672695677 0.000182108737629366 0 0 0 0.000222572687926919 0.000815612821198465 5.03391151019893e-05 0 0 0 XR_230835.1 LOC101907713 PREDICTED: Bos taurus uncharacterized LOC101907713 (LOC101907713), 2e-110 401 100.00 0.8125 0 noncoding 0 0 1 1 -0.0355821564863838 0.812426691160793 0.0148689008551689 0.771110778617133 GTAAAGGAAAAATATAAAATAAGGCTGAAGCAAGACAGCACATCTGTTACGAGGCTCCCCTCCATCCATAAGATAAAGCACTGGAAGGGCTGTGTGGGGTCCATGGGTGAGTGCAGCTCTGCTACACGAAGCCGCATGGACTGAGACAAGGTCCTACTGCCTATGGTTGGAAGCAATCTGCAATGTGAGATGCACCATCCAAGTTCACACTCACCTGAACTGAGTTGAGTCTAGTGATCAAGGGCTGGAGTCTCTGCAATTTGAAGCTGTTG TCONS_00183391 r 3' 13244 TCONS_00183391 r 3' 33683 EMBV3_14779 CTGTTTTGCTGTCTTGGTGAAATCCCAAATCTGTTCGGATAAACTATTCCAACTCTTGCC Gene BVV0102_350553 + 0 NULL GK000009.2:89662661-89683172 9 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00236249 TCONS_00236245 TCONS_00236248 1 XLOC_144416 Coding TCONS_00236249 XLOC_144416 Coding Coding C9H6orf211 9:89649123-89668507 j TSS176888 1235 1 TCONS_00236249_2 186 0.0931174089068826 5 0.936542330908528 0 0 0 0 0 0 0 0 1.69963111505344e-60 0.000517424151859714 0.000179936394640299 0.000482152670013732 4.18401657136722e-06 0.000290343267845916 0.00010121826632067 0.00128735209866355 0.000849544248440173 1.27683976632334e-06 0 0 0 2.62379428871884e-28 4.8226880813116e-06 2.69157437383506e-13 0 0 0 5.16422920513044e-08 0.000349460095877864 0.000193147031376692 NM_001083499.1 C9H6orf211 Bos taurus chromosome 9 open reading frame, human C6orf211 (C9H6orf211), mRNA. 0.0 1041 99.83 0.468825910931174 NM_024573.1 C6orf211 Homo sapiens chromosome 6 open reading frame 211 (C6orf211), mRNA. 0.0 697 86.27 0.476923076923077 TCONS_00236249_2 sp|A3KMX8|CF211_BOVIN CF211_BOVIN UPF0364 protein C6orf211 homolog; 1e-131 381 99.46 0.994623655913978 1 noncoding 0 0 0 0 -0.159815990243106 0.342891099964929 0.26203204841309 0.175697388770767 GGGTGAGACCTGAGCGTTGGAGTCAGGAGCGCGGAATCCGGTGATGGCGGGGCCTCCGGCGTCTCTGTCGGCGCGGGACGTAGGATCATTTGCATATCTTTCAGTTAAAGACAGATCACCTCAGATCTTAACCAAAGCTATTGATACATTGCATCGACATAAAAGTGAATTTTTCGAGAAACATGGAGAGAAAGGCCTGGAAGCTGAAAAGAAAGCAATTTCTCTTCTTTCGAAATTACGGAATGAATTGCAAACAGATAAACCGATTGTTCCTTTGGTTGAAAAGTTTGTTGATACTGACATATGGAATCAGTACCTAGAATATCAACAGAGTCTTTTAAATGAAAGTGATGGGAAACCAAGGTGGTTTCTCTCACCGTGGCTATTTGTAGAATGCTACATGTATCGTAGAATTCATGAAGCAATTATCCAAAGTCCACCAATCGATGACTTTGATATATTTAAAGAATTGAAAGACCAAAATTTCTTTGAATCTCAGGAATCTATCATTGCCTTATGTACTCATCTGCAAGAGTTGAGGAAAACTATCGAAGACCTAGATGAAAATCAACTGAAAAATGAATTTTTTAAAGTTCTTCAGTAGGCTGAACACCACATTGAGAAAGGAAGCCTTCTCTTGGTGCAAAGAGCTGAACATCAGCAAATCCAGTGATGAAAAGGATGCCTCTCATGTTTCAGGCCACCAACCAGCTGAAAACCAGTGGGTAGTTCTTTTGAAGGGAAATTATTCTTGTGACCAGATGGAAGTGATTTATCGAGAATGAACTGGCTTATTCTTTCAACCAAAGGGATGATATAAAAACTGTTTTGCTGTCTTGGTGAAATCCCAAATCTGTTCGGATAAACTATTCCAACTCTTGCCTCATCTTTGATAGCATTATGGACAAGTTGTTTAAAATTAAGCGAACCATAGTTTTATATCAACCTGTAAGATTATGCCTTGATTCTTTATTTCTATTTCCTTTCTCATCAGTTCCCAAATGGAATGTTATTTGAACTGCTGAAACCCTAATAATGATGATCTGAGAGGAGACACATCAGATACCTTTCCTTATTGAGTTGGGTTCTTGTTCAGAGAAGGTAACTTGGACAAGAAATCTGAATTTCAGTCCCAGTTCTGTTACTAATTAATTATGTAGTTTTTAGCTGGCACTCAATTATTCTGTTACTTAATGTTCTCAAATATAAGCAATAAACTTGCTTTTAGCTCCATG EMBV3_24041 GCGTGTCCCTCTGGTGCGGTTCACCACGGTTGTATTTAAGTGATTGTGCGAGTCGTTGTT Gene GeneID:504335|TAPBP:NM_001045885:74_cdna Constitutive 0 NULL GeneID:504335 23 GENE TAPBP MGC133861 TAP binding protein (tapasin) EMBV3_37696 GAGTGTGGTGGGGGATGGACACGACTCTTCCTTAGTATTTGCTGCCTGGCAAGAGGTCTT Gene GeneID:507914|SORBS3:NM_001045985:64_cdna Constitutive 0 NULL GeneID:507914 8 GENE SORBS3 MGC137506 sorbin and SH3 domain containing 3 EMBV3_18253 TACGAGTGGAACAGGACTCCCTGTTGACAGGGTTACATTGTTGGATCTTATGATTGCCAA Variant GeneID:767990|ATXN10:NM_001077051:15_cdna 425^761 2 EMBV3_40919 GeneID:767990 5 GENE ATXN10 MGC133945 ataxin 10 EMBV3_14949 GTATGTTCCACCCTCAGAGATATGCACTTTTAAGTGAAGAAAATGATATTGCTAGCAGTT Gene GeneID:523321|TOPORS:XM_002689484:29_cdna Constitutive 0 NULL GeneID:523321 8 GENE TOPORS NULL topoisomerase I binding, arginine/serine-rich EMBV3_14833 GACTGAACATATGATGGCTCTGCCAAAAGAAGATATAGACAAAAATCACAAATGAAGGGC Gene BVV0102_286283 + 0 NULL GK000007.2:86510449-87031922 7 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_39038 GCACTTAACTCGGCTTGCAGAAAACCTCATCAGCAGACTTACTGACCTGAGCAAGGTCCA Gene GeneID:538185|DGKK:XM_002700109:252_cdna Constitutive 0 NULL GeneID:538185 X GENE DGKK NULL diacylglycerol kinase, kappa EMBV3_36503 ATCCTGGCTGCTACACCTGTGCTGACTGCGGGCTGAACCTGAAGATGCGAGGGCACTTCT Gene GeneID:512907|PDLIM2:NM_001034430:70_cdna Constitutive 0 NULL GeneID:512907 8 GENE PDLIM2 MGC127618 PDZ and LIM domain 2 (mystique) EMBV3_10140 TCGACGTCTATCAGAGCAAGCGGAAGCTGGCCCACATGCGAAGGGTTAAAATCGAGAAAC Gene GeneID:535566|VPS37B:XM_002694567:610_cdna Constitutive 0 NULL GeneID:535566 17 GENE VPS37B NULL vacuolar protein sorting 37 homolog B (S. cerevisiae) EMBV3_07963 CCAGGGTGTTCAGCCCACTCAGCCCCCGGCGTTTGAATACGTTCATTCTTATGGAGAATA Gene GeneID:407194|CCNT1:NM_001001147:26_cdna Constitutive 0 NULL GeneID:407194 5 GENE CCNT1 MGC148698 cyclin T1 EMBV3_30312 CAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTG Spike ESK0601 + 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_37551 CCCCTCCTGCTCAACTCATTTCTACCATTTCCACTGAACAAGGTGCCTTATGAATCATCC Gene GeneID:506185|LOC506185:XM_002696108:189_cdna Constitutive 0 NULL GeneID:506185 19 GENE LOC506185 NULL hypothetical LOC506185 EMBV3_25736 TTTTTGAGCACCTGCCTCATGTAGGTCTAGATGTTTCTAAGTTCAAGCACATATCCTGAA Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_27376 TGTCCAGAAGGAGCTCACCCTTGGAGAAAAGATGCAGGATGCGGAAATCGCAGAGCTAAT Gene GeneID:618256|S100A6:XM_002686021:441_cdna Constitutive 0 NULL GeneID:618256 3 GENE S100A6 NULL S100 calcium binding protein A6 EMBV3_19577 GGGTCTTTCCAGTATGAAAGATAGATGCTAAATGTTTTGTGTACAGTAATGCAGATTGGC Gene BVT0102_210535 + 0 NULL GK000025.2:17264355-17269947 25 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00144632 TCONS_00144639 TCONS_00144636 TCONS_00144640 TCONS_00144637 TCONS_00144635 TCONS_00144641 TCONS_00144634 TCONS_00144633 TCONS_00144638 1 XLOC_088609 Coding TCONS_00144637 XLOC_088609 Coding Coding CCP110 25:17243546-17266290 j TSS108547 5553 1 TCONS_00144637_3 985 0.0687916441563119 16 0.756540473991998 0.00132727640040809 6.9494733036599e-05 0.000531307213246247 0.000616172031987331 0.000204741222288997 7.44511359676627e-05 0.000443702322007231 0.000372482388108952 0.000528609149106038 2.67873142439564e-16 4.90326494080815e-83 1.84535443324447e-21 9.43274393904695e-12 5.84865537389482e-09 3.73350665951175e-14 6.10112374118471e-13 3.40546574327066e-23 6.70412199289048e-20 0.000447218415478847 0.000494708299418659 3.1157165171786e-06 2.12799951278899e-05 0.000466768278948449 0.000303780446325619 0.00055005885259078 0.000334597835090969 0.000301174767935176 1.48260360976873e-16 6.93973568537168e-14 7.4535123177744e-05 XM_005196934.1 CCP110 PREDICTED: Bos taurus centriolar coiled coil protein 110kDa (CCP110), transcript variant X5, mRNA. 0.0 9218 100.00 0.920223302719251 NM_014711.4 CCP110 Homo sapiens centriolar coiled coil protein 110kDa (CCP110), 0.0 3988 88.36 0.558977129479561 TCONS_00144637_3 sp|O43303|CP110_HUMAN CP110_HUMAN Centriolar coiled-coil protein of 110 kDa; 0.0 1622 82.15 0.975634517766497 0 coding 1 1 1 1 -0.138215885733663 0.36455532353025 0.00172816060423341 0.97608714701812 CGGCGGCGGCGGTGGCGGCGGCGGTTGCCAGGAGCCCGCGTTGCCGCCAGAGTACCGTAATATGGCGGGGAGGAGGAGGAGAAGGCGGCGGCGAACGGAGCTGTTTTCAGTCAGTACCAATTGAGCAGTTTGCTTCCTACCAAGGCCAGGAGCTAGGGGAGGAAATCTGCCGGGGCCGTGGGAGAACAGTGCCTCCTGTGTACAGACTTTGTCCTATGTAATGGGGATTCAGTGGTGAGCAAGACTGAGAAGGTACCTGTGCTTATGGAGATTACATTTTGGTGGAGGAAGACAGACAAAACCCAAGGAAATAAACAAGATAATTTCAGATAGGGGAAACAATGCCAGACATAATACTGTGAAAACAGGCAATCAAATATTTAACACATGCTGGATGAATGAATTGTTAGCTAATCCTTCCTGGTTACCTTATATTTTCATAGCCACCATCACAGTTTTCCAGAAATTGTGAAATCACTGGACTGATTGTTTGTGATTGTGGGAAGATGGAGGAGTATGAGAAGTTTTGTGAGAAAAGTCTCTCCAGAATCCAAGAAGCATCATTATCCACAGAGAGCTTTCTACCTGTCCAGTCTGAAAGCATCTCACTTATTCGCTTCCATGGAGTGGCTGTGCTTTCTCCACTGCTTAATATTGAGAAAAGAAAGGAAATGCAACAAGAAAAGCAGAAAGCACTTGATGTTGAAGCAAGAAGGCAGGTTAATAGGAAGAAAGCTTTACTGTCTCGTGTCCAAGAGATTCTTGAAAATGTTCAGGTTAGAAAAGCACCTGATGCCAGTGATTTTCATCAGTGGGAGACTGAAACAGTTTACTCTAATTCAGAAGTCAGAAACTTGAATGTTCCTGCTACACTTCCAAATATCTTGCCAAGCCCTACTGAACACTCTACTTTAGCAGAGTTTGAAAAGATAACTGGAATTTTGCCATTGAATAATGAGGATCGATTTAAATCTAATAGAATAGACTTAGCTAGGGACTCGGAAGAATTGAGTTATCTGAAGCAATGTGATAGTTCAAATATTAGCCAGGCAGAAAATGAAGCTTCTTTAAAGACTTCCTCAACAGCAGCACAGGAGACACTTACTTCTGATGTTCTCTTTCCAACAAATGAAGAACAAGATCCATCACTTTTGGAGGAAGTTACTCCGGATCCCTACATAATGAGTCTTCAGAACCTGATGAAAAAGTCAAAGGAATATATAGAAAGGGAGCAGTCTAGACGCAGTCTGAGAAGTAGTGTAAAGAGGAGTGTTAATGAGAGTCATTCAGACAAAGAAAATGATGCTGTTAAAGTGACTGACAATGGAAAGGAGAAGTCCCCGTTGATAGGCAAACACTGTGGTTCAGTTATTCCTGACAAACCAAGCCTTAATAAATCAAATGTTCTTCTCCAAGGTGCTTTCACTCAAGCAAGCAGCATGAATACATCTGTTTTAGGTAACTTTTCTAAAGTGGACATATCTATACGAACTGGCCATACCACTGTTTTAGAGACTGATTCTAATTTCCAAGGCATTCCCACTTTTGTTACTGAAAATAATGTTATCAAAAGTCTTACTGGTTCATATGCCAAAATACCTAGCCCAGAGCCAAGCCTAAGTCCTAAAATGCATCGAAGGCGTTCTAGGCCATCATCAGCATGTCATATACTTATAAATAACCCAATAAATGCTTCAGAATTAAGTCCTAAAGGGAAAGAACAGGCAGTAGAGTTAGTTGTTCAAGAAACTGATGAAAAAACAAATGTACCTGAAACTGTGCCAAAGTTACCAGTTTGTTCAAGTAAGGTTTATGTCAGCAAAAATACAGAAGCCATACAGGAAATGGTTTTAGGTAAATCAAATCAGGTATGTCAACCTTCAGGTAATCAATTAGAAAATAAAGTTATTCATGGACTTGCTATCATGGAAGGTCAGTTAATATCTGATGCGAGAGGACCGCACAGAGTGGACAGTACATGTACTGCAGGGGAAAGATTGCATGAGCCATATGCCACCAGAGAGTGTGTTCTGAGTCAAAACTTTGGTAGTGTGAGTGGAGTCAAGTCAACCAATGTGTTAGAGAAAAACTCCTGCAACTTACAGATGGAACTGAATAAGTCTTACGATGTAAAAAACCCATCTCCTTTACTGATGCAGAACCAGAATACCAGACAGCAGATGGATACCCCTACAGTGTCCTGTGGAAAAGAACAATTTTTGGATAACAGTTTTGGGAAAGTTAAACGGAGACTTGATTTAGATATTGATAATTTGCAAAAAGAAAACTACCCTTATGTTGTAACAACTGGAATAGCTGAACAGGAGAGGCAACATTTGCCAGAAAAAAGATATTCTAAAGGATCTGTCTACATCAAGAATAAGATGTTAGAAAGTAGTTCCAAAGAAGGCGAGGAGATACTAAAAAGCAAGATACTAGCTTTTGAAGAAATGCGGAAGAGACTAGAAGAACAGCATGCCCAGCAGTTATCACTACTCATAGCTGAGCAGGAAAGGGAACAGGAAAGACTGCAAAAGGACATAGAAGAACAGGAGAAAATGTTAAAAGAGAAGACAATAATTACAGCAGAAGCCTCTGAATTGGACATTAGCAATGCTGTGGACTTTGGATGGAGAAAGATAAGTGACTCTGGTTTACTAGACACAGTGCTGTCTCAAGTGGACTCACTCCATACTTCGAATTCAAATAGTTCTGGTTTCACAAGTTCTGCCCTACAACATAGCTTTGCTTCTGCAAATGAAGTACCATTCTACCTCTGGGGATCATCAAGTAGTGGCTTGACCAAACTCTCAGTAACAAGGCCTTTTGGAAGGGCCAAAACTAAGTGGTCTCAGGTTTTCAGTCCAGAAGTACAAGCAAAATTGAACAAAGTAACTGCAGTGGCAAAAGGATTCCTTACTCGTAGGCTTATGCAGACAGATAAGCTGAAACAACTTCGACAAACTGTGAAAGATACTATGGAATTTATAAGAAGTTTTCAGTCAGAAGCACCTTTAAAGAGAGGAGTTGTTTCAGCACAAGATGCTTCTCTTCAGGAAAGAGTGTTAGCTCAGTTGCGAGCTGCCCTGTATGGCATTCATGACATATTCTTTGTAATGGATGCAGCTGAAAGAATGTCTATTCTACATCATGATCGAGAAGTTCGCAAAGAGAAAATGCTCAGGCAAATGGATAAAATGAAAAGTCCACGAGTGGCTCTTTCAGCTGCAACACAGAAGTCTCTTGATAGGAAGAAGTACATGAAGGCTGCAGAAATGGGAATGCCAAGTAAGAAATTTCTGGTTAAGCAAAATCCTTCTGAAACAAGAGTCCTTCAGCCAAATCAAGGACAGAATGCACCTGTTCATAGGCTACTGAGTAGACAAGGGAGTATATGCAGGAAAAATCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAACATTCATTAGGATAAAAACGGGGGGAAAGGTTAGGATTCATATTATTTTTCCTGCTCATGATTTTTTATTTAACTCTGGCCTCTGTTTACACAGGCAAAGTGATGTCAAAGGGCTGAGAAATCATCTGGATATTTTGGTCTCTTTCTAACCACCTCCCCCCACCCCCCCACCCCCCCCACCTCAAATTTTCCTCTTAGTATCAGTTTTTTGTTGTTGTTCAGGCACAAAGTTGCGTCTGGCTCCTTGAGACCCTATGGAATATACCCCCCAGGCTTCCCTGTCCTTCACTGTCTCCTGGAGTTTGCTCAAATTCATGTCCATTGAGTCAGTGATGCCATCCAACCATCTTACCCTTTGTCTCCTCCTCCTGCCCTCAGTCTTTTCCCACATCAGGGTCTTTTCCAATGAGTCTGCTCTTCAGTTTTGGGTGAAGACAAATTAGTGCTTAGTAACTGACTCATTTTTGTCCTTAACCTGTAGAAGTTTATTTTATTACTCAGGTGTCTGTTGAGAACCTTTTTGTAAACTCAAAGGACATTTGGGTTTATTTCTATAAAATATTGAAAAGGTGTGATAAATTCTAAATAAGTTCTGAAATACAAAGTTCATTCATCTTAGCACACTATTTGATAAATTAGATACTGTTCTGTTTAAGAGGAAATTATTGCAGAAGAATGTTTTTCTTTTGTTTTATTACTGCAAAAACTGATTAATCTCTCATATTCTTGGATTTATGATGTAGTCTCATAGGATAACACACTTGCCTGCCTATTGTGGTCTACCTAAAATGTACCACAGAAGTAGCTGGGTGTCATCATTTTGGTCACAAGTGTACATTCTTCTCAAAAACTAGTTGTCTTACAGAAATGTTAGGCTTAATGTATGTTACCCCAGTAATATCAGAAACATTTCTACTAAACTATGAAATCTGTTGAGGGTAACAAATTTGGGGAAGATAGCACAATCTTGAATGTAGTAGTGCTTAGGAATGAATGCATTATTAAATCTATTTCTGTAAAATAGAATAACATGTTGCATGCAGTTACATTTTCTATTTAGTCTGTTTATTTCTTCATACTCTGCTTTTTTTTTTAGCATGCTTGATTTAGGAGAGGAATAAAGGGCTATCTAATATGATAAATTCAGGTTTTCAAATGGGATGATAATACTCTAGTTGAAAGGCTGCATTACATGAGACACTTATATTTAAGGTTTTTCATCACTAACATATTCATTTAAAATATAAACCAAAAAAGGTTACCAAGGGAACATGACTTTATAAAAAGAATATCGTTGTTAATTTATCAAGCTATTTCCAAAAGGGCTTTGTGCTTCTCACGTAAAATTGGGAACATTTATGTGTGCATTTAATCTTTCTGACTTGAATATTAAAAAGATACTGGTATTTTGAAAATGCAGACTGTATGTATTCTTAGTATTCTCTTAAGGATTTTGAGATAAGGATGGTTTTCTTCGATTTTCCACTCCTTTTAAAATTTAACTTTTCCATCCAACTGTAGACAGAAAATTGTAATCTACTCTGGGTGTAAACTTGATTTTCTTTATTGAAATGTATCATTTATTTAAGGAGTGAATCAGAAAATTAGAAATAGAACACAGTCAAAAACGTCTGAATTACCAATTTATATTTTTGGGCAAAGTATATCAAAATGATCTTAATATGATAAATTGTGCTTTATCATTCTGAAAACTCAGGATACAGATTACTTATTATCATTGTGGGTCTTTCCAGTATGAAAGATAGATGCTAAATGTTTTGTGTACAGTAATGCAGATTGGCTATAACAAATAGTGTGTTTCAGAGAAAGTTAAAACTAGTTTTGGATTGAGGATGCAGAACTTGAGTTTTTTTTTTAAGGGTAAAGCTTGCATGTTTTACGAATTTTTTAATGTTCACAGCTTTTTCTCATAAAAGTGCCAGACATTGTTTTGTGCTTTTAATGTGCTTTTTATTTATATATATTATTTTTATTATTTTTACTTTGAGTGGAATGTCCATTAATGTAAATTATATTTATTTTTATACTTTAATTTTCACTAGTTTTGCTTCTAGGCAAAAGGAAAAATAAATTTTTCATTGTA EMBV3_23634 AACCAAGGCCCCGCGACTCAGGGATGGAGCTGTTTGATTTACTTGCTTTTTTACCCCAGG Gene GeneID:507332|CLEC4G:XM_002688860:214_cdna Constitutive 0 NULL GeneID:507332 7 GENE CLEC4G NULL C-type lectin domain family 4, member G EMBV3_23189 CTGAGTAGGCCAGAGATCCAATCTGTACAGGAACCCGTCTCTGAAGCAGCAGCTCTTCTC Control NULL NULL 0 NULL NULL NULL NULL NULL NULL NULL EMBV3_42894 CAGGCTGGGGTGAGAGGAGTAGGAAGTTACTGTTGAGTGGGTACAGAGCTTCAGTTTTGT Gene BVT0102_118855 + 0 NULL GK000010.2:103703818-103802802 10 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00023621 1 XLOC_014288 NonCoding TCONS_00023621 XLOC_014288 NonCoding NonCoding - 10:103707391-103707982 - TSS17511 591 1 TCONS_00023621_1 58 0.971235194585448 1 0 0 0 1.56582075879788e-05 8.58673117038976e-06 2.08847828747249e-06 0.000726302144877859 0 0 0 6.96192037596534e-06 0 0 0 0 9.22389230791234e-07 0 0 0 0 4.05608368796951e-06 0 0 0.000188862247328077 4.05235033188385e-06 0 0.000149015823493244 0 0 7.3927893829477e-05 0 NM_001104968.1 ZNF266 Bos taurus zinc finger protein 266 (ZNF266), mRNA. 1e-54 217 78.24 0.402707275803723 NR_036521.1 ZNF667-AS1 Homo sapiens ZNF667 antisense RNA 1 (head to head) (ZNF667-AS1), 2e-46 190 73.02 0.583756345177665 0 noncoding 0 0 0 0 -0.0541401843955115 0.678684331065021 -0.0357087657965216 0.696893353367065 CTGGGAGGGATTGAAGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACCGACTCGATGAACGTGAGTTTGGGTGAACTCATCACCGACTCGATGAACGTGAGTTTGGGTGAACTCCGGAAGTTGGTGATGGACAGGGAGGCCCTGGCGTGCTGCGATTCATGGGGTTGCAAGGAGTCAGACATGACTGAGCAACTGAACTGAACTGAACTGAATGAAAAATAAGGAAATTCTGACACATGCTACAACATGTATGAACCCTGAAGATATTACGCTAAGTGAAATAAGCCAGTCACAAAAGAACAAATGCTGCATGATTCTACTTATCTGAGGTACTGAGACAGAAAGTAGACTAGTGGTTACCAGGCTGGGGTGAGAGGAGTAGGAAGTTACTGTTGAGTGGGTACAGAGCTTCAGTTTTGTAAGATGAAAAGAGTTCTGGAGATGGATGGTGGGGATGGTTACACGACAACGTGAATGTACTTAGTGCAACTGAACTATATGCCTAAAATAGTTAGAATGGTAAATTTTATGTTACGTGTATTTTACCACAATTTTAAAAATAAAGAATTCTAA TCONS_00018578 . 5' 3574 TCONS_00018578 . 5' 3574 EMBV3_39269 GCTCTGGGTAGCCAACGACGAGAACTGTGGCATCCACGCTGCCCGATGCCCCTGCCCTCA Variant GeneID:616275|ANAPC11:NM_001113724:132_cdna 479^665 1 EMBV3_35804 GeneID:616275 19 GENE ANAPC11 MGC127621 anaphase promoting complex subunit 11 EMBV3_04202 GTGTCTCTCATCGTAAAGGCAATGAGAAAATACCTTCCCTGTTGTTGCCCACAGGCCACC Gene BVV0101_059551 + 1 EMBV3_28145 GK000013.2:10879785-10934395 13 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_07503 TGTTGAACCAGTCCACCTGAATTCCTGTCTCGCTGCTGGCGACATCCTGGCCCTGGTTTT Gene GeneID:511923|CA9:XM_002689698:152_cdna Constitutive 2 NULL GeneID:511923 8 GENE CA9 NULL carbonic anhydrase IX EMBV3_12922 TGACCTGCTGCTCTGGGACTTCCTCGACGTCCCCTTCAACCAGACGCTCAAAGACTTGAT Gene GeneID:534859|B3GNT8:NM_001076040:688_cdna Constitutive 0 NULL GeneID:534859 18 GENE B3GNT8 MGC142726 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 EMBV3_20158 CGAGTCACTGACTTGAGTTCCATCCCCAGCTCTGTCACTTAGTGATACATAACCTTTCAG Gene GeneID:526536|CRNKL1:XM_002692155:175_cdna Constitutive 0 NULL GeneID:526536 13 GENE CRNKL1 NULL crooked neck pre-mRNA splicing factor-like 1 (Drosophila) EMBV3_33955 TGTGGTCAGTGTGTGTGGCCACCTGTACTGCAGGCCCTTCATTTCTGTTGGCTAAAGCCA Variant GeneID:616187|RNF5:NM_001105445:198_cdna 164^658 2 EMBV3_16951 GeneID:616187 23 GENE RNF5 MGC140459 ring finger protein 5 EMBV3_00100 CCCCTAGCTTCCTTTTCCTGCTTAGGGAGCATGTCACTGGGTGAGGTGGAATGAAATGCA Gene GeneID:509053|NKIRAS2:NM_001075387:97_cdna Constitutive 0 NULL GeneID:509053 19 GENE NKIRAS2 NULL NFKB inhibitor interacting Ras-like 2 EMBV3_15075 TCCAGTCTTCACGGGTGGTTTAAGAGATTTTGGCTCGAGTCGTGGGGTGCTGGCCTACAT Gene BVV0102_335545 - 1 EMBV3_14014 GK000004.2:69396222-69401000 4 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs EMBV3_05524 TGATACTGAAAAAGCCGCGGAGCGAACTGGTATTTGAGCAGCAGAGGCACCGGCACGGAA Gene GeneID:281688|CHRNE:NM_174272:18_cdna Constitutive 0 NULL GeneID:281688 19 GENE CHRNE NULL cholinergic receptor, nicotinic, epsilon EMBV3_32047 GTAGTTCCTTTGTAGGACTCCTGGCCTTTGGGATGTTTTTCACATTCAAAGGCACTGTGC Gene GeneID:515582|UBR5:XM_002692760:106_cdna UTR3_Alt 2 NULL GeneID:515582 14 GENE UBR5 NULL ubiquitin protein ligase E3 component n-recognin 5 EMBV3_10507 AGGACCTCCTGCTTCCCCAGAACCAGTTCGCCATGTTCCTGTACTGCTTCATCTTCATAC Gene GeneID:768009|MGC134516:NM_001077069:185_cdna Constitutive 0 NULL GeneID:768009 11 GENE MGC134516 NULL transmembrane protein ENSP00000343375 homolog EMBV3_30289 AATGGACCAGATTCTACCTGTTGGTGATCATAACCCGTGGTGACCTGACACCTGATGCTG Gene BVV0102_169308 + 0 NULL GK000017.2:60437118-60446438 17 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00077659 TCONS_00077660 TCONS_00077658 1 XLOC_047114 Coding TCONS_00077660 XLOC_047114 Coding Coding RNFT2 17:60443472-60505639 j TSS57978 4723 1 TCONS_00077660_1 360 0.12894346813466 12 0.924219026477496 0.000396497789415418 4.22998525275674e-10 0.000166339098470185 0.000192363252001574 0.000887157560820055 0.000253424892919617 3.44099215621629e-05 2.73523182968261e-08 2.26627540083664e-06 2.78932832571541e-08 1.51951437700818e-08 1.13483229361502e-38 3.29176275769542e-05 6.93625867189411e-05 1.59903872998471e-05 1.7841313846328e-07 1.09161422947401e-07 1.63347346630877e-07 0.000454009353008435 0.00075941757383017 9.87724107632605e-05 4.95199748964641e-08 0.00012919551185146 3.03398585957781e-05 0.000504393209790352 0.00100779692959894 0.00092453461230723 6.65460990763234e-06 3.39190698842517e-08 4.09126023729828e-08 XM_005217950.1 RNFT2 PREDICTED: Bos taurus ring finger protein, transmembrane 2 (RNFT2), 0.0 6331 100.00 0.742959983061613 NM_032814.3 RNFT2 Homo sapiens ring finger protein, transmembrane 2 (RNFT2), 0.0 1436 87.56 0.244971416472581 TCONS_00077660_1 sp|Q96EX2|RNFT2_HUMAN RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2; 0.0 514 88.58 0.897222222222222 0 coding 1 0 1 1 -0.119921979880864 0.30885329571986 0.00671560995967616 0.906235395535929 CGGACCTAGCGACCTGAGAGAAAAACCTGAGGAGAGGCCGGAAGCACTCGGAAGTCAGGTGCTCTCCCGGCCGCGAGAGTGATTGGCTTGGAAGGACGTGAATGATGCCGCTGTGATTGCTGAATCGTTTGTGCAGGATTTGGAATCTCTGGTAAGCTCCTGTGACCCGTGTGTCCCTTTGGAGAGAAGGAAGAGGGAGAGATCTGCTTTCTCTGGAATCCAGTGGTCACATCCCCACCTGGAACCCTGAATGCCCACCTGAGGTGTCGTCAACATGGAGTTCTGAAGTCCATGTGGTTCCTCACAGTGAACCAGGTCTTAAGGAAAATGCAGAGACGCCACAGCAGCAACACAGAAAACGTTCCACCTGAAAGAAATCGCAGCCAAGCGCTTAGCTCCGAGGCGAGTGTGGACGAAGGCGGCGTCTTTGAGAGTCTGAAGGCGGAAGCGGCCTCCCCACCAGCGCTCTTCTCGGGCTTATCCGGCCTCCCGGCGGGCAGCCTCCCCACCACCCCATTCCCGTCCAGCCTGGTCCTGGGGGCCGCGGCCGGCGGCGGGGACGTGTTCCTCCAGATGCCGGCGTCCAGGGAGGAAAGCGGGGGCCGCGGCGAGGGGGGCGCCTACCACCACCATCGGCAGCCCCACCACCACTTCCACCACGGCAGCCACCGCGGGGGCTCCCTGCTGCAGCACGTGGGCGGGGACCACCGCTCACACTCAGACGAGGCTGGCGATGAGCAGCCCGGGACACCCGCCCCAGCCTTGTCCGAGCTGAAGGCTGTGATCTGCTGGCTCCAGAAAGGGCTGCCCTTCATCCTCATCCTCCTGGCCAAATTATGCTTCCAGCATAAGCTCGGCATTGCCGTGTGCATCGGAATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTCCGGGAACAGGTCTCTCTAAAGGAGAAGAGGTCGGTGCTGGTCATCCTGTGGATCTTGGCCTTTCTAGCGGGGAACACCCTCTACGTGCTCTACACATTCAGTTCCCAGCAGCTGTATAACAGCCTCATATTCCTGAAACCCAACCTGGAGACGCTAGACTTCTTCGACCTGCTGTGGATCGTGGGCATCGCAGACTTTGTGCTCAAGTACATCACCATCGCTCTCAAGTGCCTTGTCGTGGCCCTGCCCAAGATCATCCTGGCCGTCAAGTCCAAGGGAAAGTTCTATCTGGTCATCGAGGAGCTACTTCCTGGGAGGGGTCCTGATCGTCCTCTACAGCCTGTGCAAGTCCTTCGACATCTGTGGCCGCGTGGGCGGAGTCAGGAAGGCCCTGAAGCTTCTCTGCACCTCTCAGAATTATGGAGTCCGGGCCACGGGGCAGCAGTGCACAGAAGCTGGTGACATCTGTGCCATCTGCCAGGCTGAGTTCCGGGAGCCTCTGGTCCTCATGTGCCAGCACGTGTTCTGTGAGGAGTGCCTCTGCCTCTGGCTGGACCGTGAGCGCACCTGCCCGCTCTGCCGCTCGGTTGCCGTGGATACCCTGCGCTGCTGGAAGGACGGGGCCACTTCGGCACACTTCCAGGTGTACTAGGGCTGAAGACTGTGGCCCCGGGGCTCGCAGGCACACCAGGGAGATGATGGAGGGTCAACGGTGTCAGGACCACCTCTGAGAGCTTCCTTGAAAACAGCCCTCGGGCCCCGACTGCCCTCCCTCCTGCCTCTCTCCATCCAGCCACCTGTCCCCCACCCCACCCCCGCCCTCACCTTCCTCTCTTGTTTGCCTCCACATGGGGATGCCTTCTCACTCACACTTGGTCTCCACCGAGGTCAGTCTCCCTCCTCCCTCCGAGTCAAAGAACTGATAATGGACCAGATTCTACCTGTTGGTGATCATAACCCGTGGTGACCTGACACCTGATGCTGCAAACCGGAGAGAGGCCTTTCAATGCCGCCTCCCCACCAGGGCCCCAGGTCTGCAGATGAGAATCACTGTGAAGTATTTTTCAAATGCAAATGCTGGGCCCCACCTTATACCTACGGGAACTTCGTGTATCAGAACCCTCAGAGTGAGCCAGGCAGGGTCTCGAACTTTCGGCCCAGATGACCTCCTATAACACTCACACCGCCCCAAGGTGGAGGTACTGTTGTCTCCTCTGTGTCACAGATGAAGAAACTGAGCTCAGAGCTCCATGTGGAAACATTTCCAGGTCACCCGGCGAGCAGTGATGGACCAAGCTTGCAGCCCTGGCCTGTCTGGCTTTGGAGCCTGCCTCTTACCCACACACTGATGTGCTGCTCAGACACTGCGGGCATGAGGCCCCTCAGTCATGTTTTTTTTTTTTTTTCAACGCACAGGAGGTGATTCTGACGTCATCGGTGACTCAAGTATGTAGTGTGTTTCATTTGGACTGGGTTGAGGATGCTAATAGTGAATGCCAGCTCTGAAAATCTAGTCGTGACTGGGTTCACAGGAAATTTTGGTCCTTAAAGTTGCTGTTTAGCTGGATTCCTGCCAGGATGCTCAGTTGTGATTGGGTATCTTCCAAGTGGCACAGTGGTAAATAACCCATCTGCCAATGTAGGAGACATGGGTTCGATCCCTGAGTTGGGAAGATCCCCTGGAGGAGGAAATGGCAACCCCCTCCAGTATTCTTGCCTGGGAAATCCGATGGACGGAGGAGCCTGAAGGGCTACAGTCCACAGGGTCGCAGAGTCAGACGCGGCTGATCGAGCACAGCACATGGCACATCAAGAAAGGCCGGTTCCAGAGACCTGCCCGGAGGCAGTGGCTAAGACTCTGTGTCCCCAGTGTGGGGGCCTGGGTTTGATCTCTGCTCAGGGCACTGAGATCCCACATGCCATGGGACGTGACCTGAAAATGAAAAAATAGAAAGGCCGCCCCTGGTCCAGATGCGGGTGTTACTGGGTGTCCCCTCCCGTATTTATTTCTCTTCTCCTTTTGTCCTGTCCCTCATTTAAATCTCAGGCTTGTCAACAGCTCCTGTGGCCATTGCCTTCTCCTCTAGTAGCCTTCAGAGCAAAAGGCAAGATCCTTGTTACGGATTTTTTTTCCACAAGCCAGTATGCTGGCAGAGAGCACAGCAGCGATCCATGTTTCCTGGAATGTCTCTACCAGAGCTCCTAATCTCTGTAACACAAGCTCTCCACCCACGAGACCCTCTCTGCTCTGAAATCTGGGAGGAGAAGGCACAAGTGGCCCCTTGGAAGCCACTGGAATCTTGCCTGGCCTACCCACCCTCCCAGCGCTATTCTCTCACTGTCAACCTCAGTACCACAGGTCAGTGCCAACAGCATTAGAGAGCATTCTGGGTGGCTACTGAGCAGATTAGCAAGAAAGCCCCGAGAGAAATGGTGGGAGCCTTACTGCCACCTCACCCTCAGCCAGGATTCTCATGCCCATCCCATCCCCAAGAGATTCAGGGCATTCACCCCTTTTGTGCTATCAAGTCAGGACCTTTCCTTTGCCTGACATCCCTGGCTCTTTGCTGGTACCCAGCAAGACATCCCTTCCAGGGCAGCGTGGCATCTTTCAGGCTCTGTTACTATGGCAATGGCCGTGATGTTAACAATCCCACTTGCCTGGATAATCAAGTCGGAAGGGGAAGTGGGGCCAGGGGGATTTGGCTGCTCTGCCCCCTTCCCCCTCTCCCCCGCCCCCCACCCGGCCACCTTGAGGAAGAACTGAAGGGACACAACAGGAGCTTCTACAGCTGATTTTTATCACAAGGATCATCCTGCCTGCAGATGCCATCAAAGAAGCATGAGAAAATGCCACTGAAGAAGACTTACTAATGTGCCAGCGTGTGATGGAGCAGACAGAGCAGTCTGCTGGGAGTCAGGCCTGGAATTTTGATTTCAGACTCCACATGGCTTTGGGAAGTCACTTTACCTCCCCGTAGCCATCTCCAGGGTGACAAAGCCTAGTGCATTATCTGCGGGAACCAGGGAAACCAGCAATGTAGATTACAGATGAATACCCCCAACCATTTTGTCAATTACACTCATGCCACCAAAAAAAAATATTGAACGTTCTGCAAATAATGAGCCATGTCTCAGACACTATAAAGACTGTCACATGCGGGGGACATTTGGGGAGGGGGGGCAGGTGGGATGATTTAGTTAGATTTTATTTATGTATCCCACCCTCAAGTCACGTTCTGGAGGTTTCCTTTTGGGGTGGGAGGATTTAACTTCTGCTCAAGGCAGAGAAACAGTGGCCAGGGGCAGAGGTTTCCAGACATCAAGCTGCATATTTTCCCTAACATGAGAAAAGCAGCCAAGAGTCACCATTGGAAAGAAGAACAATGCCACTGTCTTTTATCCACCTCGGCTCTGCAAACTCATTTGTTAGAGGCAGGGTTAATTGAGTGTCAGGTGGGAGAGTCCTGCTCTTAATATTTTATGATTCACTGGCTGAAGTTCCACGGAGTCCTTGGAAATGGCTCTCCTAATGTAAAAGATCTTGAGCGTAATAAATACGAGATGAAAAAGAAAAAAAAAAAAAAAGCTTTGGACCTGGATGTCATAGGTTCATTATCTCCCTAAGGGGAGCATGTGAGAGGCATGGGAACACTTCCAAGCTGCCAAGACCTGGGGTTGGAAATAGGAAATGTAAAGTGAGTCCTGGAATCTTAGTATGTTTGCTCTGGGCCAAACAGAGCCGCGCTTTGGTGTATTTAACGTCCCCTTAAGTTGCAGTCTGCCAATAAATATGATGTGTTGATAAAAG EMBV3_34675 GGGTGTGTAAGGTGTGATTTCTGACCAGAGCCCTAATTCTGCAATATGACCAAAACCAAG Gene GeneID:516629|LOC516629:XM_002691384:270_cdna UTR3_Alt 1 NULL GeneID:516629 11 GENE LOC516629 NULL similar to RIKEN cDNA 1110067D22 EMBV3_27353 AGGCATTTCAAGACCTTTCTGTGTTTTTGGTGTTGTTATTATAGACATGCCTGAACCGGC Gene GeneID:787581|H2B:NM_001105643:176_cdna Constitutive 0 NULL GeneID:787581 23 GENE H2B MGC159573 histone H2B EMBV3_17387 TGAGCCTGGAATGTGGGATGAAAGGTTTGAATCTGACAAAGGGCAGAGGACTTCACAGGG Gene GeneID:508115|NGRN:NM_001045992:89_cdna Constitutive 1 NULL GeneID:508115 21 GENE NGRN MGC137811 neugrin, neurite outgrowth associated EMBV3_28899 TTACAACACCAAGATGACAATTGAAGACGTCCTGAGCCCAGATACCTGTGTGTGTCGGAC Gene GeneID:536745|GPKOW:XM_002700080:165_cdna UTR3_Alt 2 NULL GeneID:536745 X GENE GPKOW NULL G patch domain and KOW motifs EMBV3_30616 TTGGCAAAAGCATCGCTGAAAGGCAAGCTCAATGTGTACTTATTTTATCCTGTGACCCTG Gene GeneID:537257|USP32:XM_002695643:77_cdna Constitutive 2 NULL GeneID:537257 19 GENE USP32 NULL ubiquitin specific peptidase 32 EMBV3_10391 CGGCGTGTACTGGGGGCCAGGCCATCCCTTCCTGCAAAGCCATAGAGCAAGCTAAGGCTC Variant GeneID:613354|RNASEH1:NM_001046505:19_cdna 562^620 1 EMBV3_25934 GeneID:613354 8 GENE RNASEH1 MGC137747 ribonuclease H1 EMBV3_12231 GATAGCAATAGTAAAAACAGCAGCCCAAAGATCGTATAATGAAAAAAACAGAAGAGTCTG Variant GeneID:533853|SENP6:XM_002690035:31_cdna 594^685 4 EMBV3_34953 GeneID:533853 9 GENE SENP6 NULL SUMO1/sentrin specific peptidase 6 EMBV3_11273 GGGGCCCAGCAAACCAAGAAAGACAAGGATAAGAAAAACTGATCGTCTGCCTCTTGAGAG Gene GeneID:535746|SEPT11:NM_001082447:89_cdna Constitutive 1 NULL GeneID:535746 6 GENE SEPT11 MGC148776 septin 11 EMBV3_30957 CAAGAACATCCCCATTTCTGTTCCTGGATCCTCCTCTGCCACCCCATCCACAAGTAAAGA Gene BVV0101_038187 + 1 EMBV3_26413 GK000021.2:59795814-59822519 21 NOVEL NULL NULL Novel Transcribed Region; evidence: embryonic ESTs TCONS_00119912 1 XLOC_072999 Coding TCONS_00119912 XLOC_072999 Coding Coding PPP4R4 21:59398008-59808715 = TSS89670 2466 1 TCONS_00119912_1 821 23 0.994051706086592 0.00268790303512217 0.00229631805473235 0.0024705699431614 0.00198717580742721 0.00175547322781462 0.000595125956735767 0.00105774871530199 0.00213923326334597 0.00237982761665849 0.000157314980473313 9.41431907255779e-05 0.000157824561132301 0.000274682149248014 0.000678908595174299 0.00109966879615646 0.000171364603537003 0.000170718710744698 0 0.00363072207864087 0.00292379490632353 0.00250492819629818 3.51203223385312e-05 7.07934130848526e-05 2.03949217042344e-05 0.00469922233229095 0.00266247458431994 0.00180487433654713 5.41552515253502e-05 1.2189330131829e-05 0.000124341371610181 XM_001790303.4 PPP4R4 PREDICTED: Bos taurus protein phosphatase 4, regulatory subunit 4 (PPP4R4), transcript variant X1, mRNA. 0.0 4433 100.00 0.996350364963504 NM_058237.1 PPP4R4 Homo sapiens protein phosphatase 4, regulatory subunit 4 (PPP4R4), 0.0 3732 93.91 0.989862124898621 TCONS_00119912_1 sp|Q6NUP7|PP4R4_HUMAN PP4R4_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 4; 0.0 1573 96.21 0.995127892813642 2 coding 0 0 0 0 -0.038160200072176 0.813176611418035 -0.0197258245773152 0.681834026984272 ATGCATCCGCCGTCGCCCGCCGCCGCCGCCGCCGTGATGGATTTCAGTCAGAACAGCCTGTTCGGCTACATGGAGGACCTGCAGGAGCTCACCATCATCGAGAGGCCGGTCCGCCGGAGCCTCAAGACACCAGAAGAAATAGAAAGATTGACAGTTGATGAAGACCTCAGTGATATTGAAAGGGCTGTTTATCTGCTCAGTGCTGGTCAGGATATCCAGGGAACAAGCGTGATTGCGAATCTTCCATTTCTGATGCGACAGAACCCTGCTGAGACACTTCGGAGAGTCTTGCCAAAAGTTAGAGAAGCCCTGCATGTTGCAGGGGTGGAAATGCAGTTAACGGCTGCAGTGTCGTTTTTGACCATCCTGCAGGACGAATCGGTGTCCGTTCATACCTATGCCCACTCCTTCCTCCAAGTCATCCTACTGCACCTGGAGCACAGGGACGCAGGTGTCAGCAACGCATGGCTGGAGACTCTTCTGTCTGTGATAGAAGTATTGCCCAAAGATACCCTAAGGCATGAGATTTTGAATCCACTCGTTTCCAAGGCACAACTTTCCCAAACAGTCCAGTCTCGTTTAGTTAGTTGTAAAATTTTAGGAAAATTGACCAACAAATTTGATGCCCTTGCCATTAAAAGAGAAATACTTCCCTTGGTAAAATCACTCTGTCAAGATGTAGAATATGAAGTTCGATCTTGCATGTGTCGGCAATTAGAAAATATAGCTCAGGGCATTGGGACAGAACTTACCAAAAGTGTGGTGCTCCCTGAATTAATAGAACTTTCTAGGGATGAAGGCAGCAGTGTGCGGCTGGCAGCCTTTGAAACTTTGGTTAATCTGCTCGACATATTTGATACAGATGACAGAAGTCAAACTATACTTCCCGTAGTGAAATCATTTTGTGAAAAATCTTTCAAAGCAGATGAATCAATTCTTATTTCTTTATCTTTCCATTTAGGAAAACTATGCCATGGATTATATGGAATTTTTACTCCAGATCAACACTTGAGATTTTTGGAGTTTTATAAGAAACTTTGTACATTGGGTTTGCAACAGGAAAATGGACACAATGAAAACCAGATACCACCCCAAATCTTAGAGCAGGAGAAGAAATATATTTCAGTACGGAAGAACTGTGCTTATAACTTTCCGGCCATGATTGTTTTTGTTGATCCCAAAAACTTCCACATGGAACTCTATTCTACATTCTTCTGTCTTTGTCATGACCCTGAAGTACCAGTCAGATATACTATTGCTATTTGCTTTTATGAAGTGTCTAAACTTCTGAATTCTGGAGTATATTTAATACATAAAGAACTAATAACATTGTTGCAAGATGAATCATTGGAGGTACTAGATGCTCTCATAGATCATCTTCCAGAGATTCTGGAACTGATGTCTACTGGTGGGGAGAGCAGTGTTCAAGAAAATAAGTTATCATCTCTGCCTGACTTGGTTCCAGCTCTCACAGCTGCTGAGCAGCGAGCTGCAGCGTCCTTAAAGTGGAGAACTCATGAGAAGCTGCTCCAGAAATACGCCTGTCTGCCACAAGTCATATCAAGTGATCAGATCTATTATCGTTTCTTACAAAGAATGTTCACAATCATGATGACAAATAATGTCTTACCTGTCCAAAAGGCGGCTTCACGAACGCTATGCATTTTTCTACGTTATAATCGTAAACAGGAACAGAGACATGAAGTGATTCAAAAATTAATTGAACAACTGGGCCAAGGAAAAAGTTATTGGAACAGACTCCGATTTTTGGATACCTGTGAATTTATTATAGAGATCTTTTCCAAATCATTTTTCTGTAAATATTTCTTTCTACCTGCTATTGAACTGACACATGATCCAGTAGCAAATGTAAGAATGAAACTTTGCTACTTGTTGCCCAAAGTGAAATCTACTCTGAAGATTCCTGCAGATAAGCATCTACTTCAGCAGTTGGAAATGTGTGTGAGAAAACTCCTCTGTCAAGAAAAAGATAAAGATGTTCTGGCTATTGTAAAAAGAACCGTGTTAGAGTTGGACAGAATGGAAATGTCCATGGATGCTTTTCAGAAAAAGTTTTATGAGAAAGATTTGTTGGATCAAGAGAAAGAAAGAGAAGAACTACTTCTTTTGGAAATGGAGCAATTAGAAAAAGAGAAGCAACAAAATGATGGAAGGCCCATGAGTGATAAAACCTTTGAAAAGAAACGTAGAGACTCTAAGACACCAACAAGTCTGCCCAAGAACATCCCCATTTCTGTTCCTGGATCCTCCTCTGCCACCCCATCCACAAGTAAAGAAATCAAGAAATCTAAATTGATTCGAAGCCAGTCTTTTAATAATCAAGCTTTTCATGCAAAATATGGCAACTTAGACAAATGTACTACTAGTAAAAGTTCTACAGCAGCATATACACCTTCTGTCTCAGGTTTATCAAAGACTTCTATGATTTCACTAACTGGTAAGTAG